Sequence	Length	Modifications	Modified sequence	Carbamidomethyl (C) Probabilities	Oxidation (M) Probabilities	Carbamidomethyl (C) Score Diffs	Oxidation (M) Score Diffs	Acetyl (Protein N-term)	Carbamidomethyl (C)	Oxidation (M)	Missed cleavages	Proteins	Leading proteins	Leading razor protein	Type	Raw file	Experiment	MS/MS m/z	Charge	m/z	Mass	Uncalibrated - Calibrated m/z [ppm]	Uncalibrated - Calibrated m/z [Da]	Mass error [ppm]	Mass error [Da]	Uncalibrated mass error [ppm]	Uncalibrated mass error [Da]	Max intensity m/z 0	Retention time	Retention length	Calibrated retention time	Calibrated retention time start	Calibrated retention time finish	Retention time calibration	Match time difference	Match m/z difference	Match q-value	Match score	Number of data points	Number of scans	Number of isotopic peaks	PIF	Fraction of total spectrum	Base peak fraction	PEP	MS/MS count	MS/MS scan number	MS/MS scan numbers	MS3 scan numbers	Score	Delta score	Combinatorics	Intensity	Reverse	Potential contaminant	id	Protein group IDs	Peptide ID	Mod. peptide ID	MS/MS IDs	Best MS/MS	Carbamidomethyl (C) site IDs	Oxidation (M) site IDs	Taxonomy IDs	Taxonomy names	Mass deficit
AAAAAAAAKP	10	Unmodified	_AAAAAAAAKP_					0	0	0		ENSG00000163064|ENST00000295206|EN1	ENSG00000163064|ENST00000295206|EN1	ENSG00000163064|ENST00000295206|EN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7853698730469	2	406.734877	811.455202	0.28723	0.00011683	0.35075	0.00014266	0.63798	0.00025949	406.73478398274756	29.763	0.30236	29.673	29.447	29.749	-0.089544					9	6	2	0	0	0	0.37624	1	1922	1922		29.15	17.639	1	40477			0	5762	0	0	0	0					0.041932465544959996
AAAAALKVP	9	Unmodified	_AAAAALKVP_					0	0	0		ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2587585449219	2	406.255446	810.496338	0.42655	0.00017329	3.2952	0.0013387	3.7217	0.001512	406.2566706116534	66.482	0.82449	66.608	66.363	67.188	0.12649					65	38	2	0	0	0	0.7932	1	5942	5942		25.45	4.9683	1	124840			1	14415	1	1	1	1					0.08351007593978466
AAAAARLLL	9	Unmodified	_AAAAARLLL_					0	0	0			REV__ENSG00000189045|ENST00000601380|ANKDD1B	REV__ENSG00000189045|ENST00000601380|ANKDD1B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2825012207031	2	435.281995	868.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.513	1	66.478	65.978	66.978	-0.035217								0	0	0	0.33301	1	6361	6361		19.36	2.655	1		+		2	23058	2	2	2	2					0.10990385376669565
AAAAASRW	8	Unmodified	_AAAAASRW_					0	0	0			REV__ENSG00000184486|ENST00000328345|POU3F2	REV__ENSG00000184486|ENST00000328345|POU3F2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.21197509765625	2	402.211569	802.408586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.865	1	66.917	66.417	67.417	0.052368								0	0	0	0.30609	1	5936	5936		44.531	3.9584	1		+		3	22686	3	3	3	3					-0.0005219327676968533
AAAACSGGRLG	11	Unmodified	_AAAACSGGRLG_					0	0	0		ENST00000272748.8_1_2:176860368-176866983:-|nuORF	ENST00000272748.8_1_2:176860368-176866983:-|nuORF	ENST00000272748.8_1_2:176860368-176866983:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2331848144531	2	467.232176	932.449799	-1.043	-0.00048731	3.6725	0.0017159	2.6295	0.0012286	467.23370254393717	68.31	1.3377	68.343	68.023	69.361	0.033005					128	53	3	0	0	0	0.51007	1	6493	6493		51.193	3.5354	1	1288900			4	9570	4	4	4	4					-0.019128002995898896
AAAAMPTRI	9	Unmodified	_AAAAMPTRI_					0	0	0			REV__nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	REV__nc|ENSG00000101166|Q9Y3B1-2|PRELID3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.2488708496094	2	451.249837	900.485122	-0.97999	-0.00044222	-1.1427	-0.00051564	-2.1227	-0.00095786	451.24921015554173	65.724	1.4568	65.769	65.089	66.546	0.045113					104	74	2	0	0	0	0.7932	1	5803	5803		19.36	1.0356	1	906430	+		5	17247	5	5	5	5					0.0308986222820522
AAAARRSP	8	Unmodified	_AAAARRSP_					0	0	0			REV__ENST00000395878.7_1_16:23582504-23582672:+|nuORF	REV__ENST00000395878.7_1_16:23582504-23582672:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.22833251953125	2	400.230294	798.446034	-1.8752	-0.0007505	-2.6209	-0.001049	-4.4961	-0.0017995	400.22927707495484	54.825	2.6613	54.881	53.254	55.915	0.055611					132	91	2	0	0	0	0.82419	1	4589	4589		13.775	0	1	1098100	+		6	26128	6	6	6	6					0.038748979888509893
AAAARVPR	8	Unmodified	_AAAARVPR_					0	0	0		ENST00000502486.5_2_4:42153705-42154329:-|nuORF	ENST00000502486.5_2_4:42153705-42154329:-|nuORF	ENST00000502486.5_2_4:42153705-42154329:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2484436035156	2	406.248486	810.48242	-0.18704	-7.5983E-05	0.46265	0.00018795	0.27561	0.00011197	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.80706	1	9204	9204		19.36	4.6959	1	50007000			7	12853	7	7	7	7					0.06959774885558545
AAAAWDAH	8	Unmodified	_AAAAWDAH_					0	0	0		ENST00000400202.5_3_21:16386752-16437087:-|nuORF	ENST00000400202.5_3_21:16386752-16437087:-|nuORF	ENST00000400202.5_3_21:16386752-16437087:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.68768310546875	2	406.687927	811.361301	-2.0484	-0.00083306	2.4724	0.0010055	0.42397	0.00017243	406.6888430338814	28.541	0.52734	28.541	28.303	28.83	0					30	21	2	0	0	0	0.89457	1	1207	1207		37.028	5.0736	1	32190			8	11222	8	8	8	8					-0.05192472547776106
AAAEDLFWCLK	11	Unmodified	_AAAEDLFWCLK_					0	0	0			REV__ENSG00000130313|ENST00000252603|PGLS	REV__ENSG00000130313|ENST00000252603|PGLS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.813720703125	2	633.812999	1265.61144	-0.21836	-0.0001384	3.2135	0.0020368	2.9951	0.0018984	633.8149832023514	75.797	0.86972	75.751	75.381	76.251	-0.045975					72	22	4	0	0	0	0.54689	1	7467	7467		31.53	0	1	416850	+		9	18866	9	9	9	9					-0.010736760571717241
AAAEDLFWCLK	11	Unmodified	_AAAEDLFWCLK_					0	0	0			REV__ENSG00000130313|ENST00000252603|PGLS	REV__ENSG00000130313|ENST00000252603|PGLS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.8145751953125	2	633.812999	1265.61144	-0.74532	-0.0004724	3.9011	0.0024726	3.1558	0.0020002	633.8153934693904	75.753	0.80846	75.841	75.424	76.232	0.087639					62	21	4	0	0	0	0.50531	1	7026	7026		19.997	0	1	337910	+		10	18866	9	9	10	10					-0.010736760571717241
AAAEVFRDTF	10	Unmodified	_AAAEVFRDTF_					0	0	0		ENST00000515466.1_1_5:43576000-43602992:-|nuORF;ENST00000513560.6_1_5:43583622-43603127:-|nuORF	ENST00000515466.1_1_5:43576000-43602992:-|nuORF	ENST00000515466.1_1_5:43576000-43602992:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.7775268554688	2	563.780013	1125.54547	-0.042612	-2.4024E-05	-3.4506	-0.0019454	-3.4932	-0.0019694	563.7777650447418	25.71	0.5638	25.669	25.415	25.979	-0.04117					29	14	3	0	0	0	0.82886	1	1102	1102		37.812	3.639	1	74922			11	13052	10	10	11	11					-0.012277489077177961
AAAEVFRDTF	10	Unmodified	_AAAEVFRDTF_					0	0	0		ENST00000515466.1_1_5:43576000-43602992:-|nuORF;ENST00000513560.6_1_5:43583622-43603127:-|nuORF	ENST00000515466.1_1_5:43576000-43602992:-|nuORF	ENST00000515466.1_1_5:43576000-43602992:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.7762451171875	2	563.780013	1125.54547	1.0624	0.00059895	-3.9923	-0.0022508	-2.9299	-0.0016518	563.7771928359884	25.681	0.52278	25.649	25.398	25.921	-0.032125					27	15	2	0	0	0	0.82886	1	1027	1027		37.812	6.2817	1	68855			12	13052	10	10	12	12					-0.012277489077177961
AAAFVIGR	8	Unmodified	_AAAFVIGR_					0	0	0		ENST00000489664.1_1_1:156024680-156025387:+|nuORF	ENST00000489664.1_1_1:156024680-156025387:+|nuORF	ENST00000489664.1_1_1:156024680-156025387:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7398376464844	2	402.739963	803.465373	1.7818	0.00071759	-2.1753	-0.00087608	-0.39351	-0.00015848	402.73894017753986	35.084	1.5442	35.331	34.892	36.436	0.2477					98	39	3	0	0	0	0.81548	1	2615	2615		20.482	2.2197	1	629910			13	12657	11	11	13	13					0.05577854279761141
AAAFVIGR	8	Unmodified	_AAAFVIGR_					0	0	0		ENST00000489664.1_1_1:156024680-156025387:+|nuORF	ENST00000489664.1_1_1:156024680-156025387:+|nuORF	ENST00000489664.1_1_1:156024680-156025387:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.73724365234375	2	402.739963	803.465373	-1.0067	-0.00040545	-1.8183	-0.00073229	-2.825	-0.0011377	402.73907914939394	40.848	1.2743	41.24	40.867	42.142	0.39209					61	35	3	0	0	0	0.81548	1	3508	3508		20.482	4.8456	1	1860800			14	12657	11	11	14	14					0.05577854279761141
AAAFVRGL	8	Unmodified	_AAAFVRGL_					0	0	0		ENST00000380636.1_1_X:12993550-12993946:+|nuORF	ENST00000380636.1_1_X:12993550-12993946:+|nuORF	ENST00000380636.1_1_X:12993550-12993946:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.739013671875	2	402.739963	803.465373	0.18877	7.6025E-05	-2.5593	-0.0010307	-2.3705	-0.00095471	402.7388433637212	40.145	0.69707	40.226	40.046	40.743	0.081345					48	22	3	0	0	0	0.81548	1	2517	2517		20.482	1.1219	1	605970			15	10926	12	12	15	15					0.05577854279761141
AAAGIHLF	8	Unmodified	_AAAGIHLF_					0	0	0			REV__nc|ENSG00000130055|Q9HCC8-2|GDPD2	REV__nc|ENSG00000130055|Q9HCC8-2|GDPD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.2283020019531	2	400.226688	798.438824	-0.50486	-0.00020206	4.0747	0.0016308	3.5699	0.0014288	400.2285588174541	55.339	1.7133	55.312	54.396	56.109	-0.027279					91	48	3	0	0	0	0.84567	1	4998	4998		24.504	4.0222	1	614190	+		16	18846	13	13	16	16					0.031541653884119114
AAAGKKKAP	9	Unmodified	_AAAGKKKAP_					0	0	0			REV__ENST00000588858.5_1_19:13886394-13889009:+|nuORF	REV__ENST00000588858.5_1_19:13886394-13889009:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2666931152344	2	421.266345	840.518136	-0.2944	-0.00012402	0.66296	0.00027928	0.36856	0.00015526	421.266514892719	28.336	0.70004	28.239	28.011	28.711	-0.096947					32	16	3	0	0	0	0.77546	1	1717	1717		31.955	2.8053	1	135680	+		17	17497	14	14	17	17					0.09149812342548103
AAAKPTPPK	9	Unmodified	_AAAKPTPPK_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.766357421875	2	440.766178	879.517802	0.20273	8.9357E-05	-0.61968	-0.00027313	-0.41695	-0.00018378	440.76612269748716	18.185	0.78542	17.708	17.198	17.983	-0.47694					39	16	4	0	0	0	0.36616	3	368	344;357;368		60.118	22.959	1	160700			18	5511	15	15	18;19;20	20					0.07322392622700136
AAAKPTPPK	9	Unmodified	_AAAKPTPPK_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.7666015625	2	440.766178	879.517802	0.40229	0.00017731	0.077187	3.4022E-05	0.47947	0.00021134	440.7660677899125	18.295	0.85853	17.674	17.21	18.069	-0.62141					39	19	3	0	0	0	0.086373	1	368	368		95.815	20.772	1	167020			19	5511	15	15	21	21					0.07322392622700136
AAALLDVVCLH	11	Carbamidomethyl (C)	_AAALLDVVC(Carbamidomethyl (C))LH_	AAALLDVVC(1)LH		AAALLDVVC(42)LH		0	1	0			REV__ENSG00000180929|ENST00000322241|GPR62	REV__ENSG00000180929|ENST00000322241|GPR62	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	591.3204956054688	2	591.320991	1180.62743	0.79077	0.0004676	-2.0931	-0.0012377	-1.3023	-0.00077009	591.3198402480059	66.678	0.70819	66.811	66.547	67.255	0.13326					57	30	3	0	0	0	0.61774	1	5942	5942		42.396	7.2441	1	304310	+		20	22429	16	16	22	22	273				0.04434030179709225
AAALLLKI	8	Unmodified	_AAALLLKI_					0	0	0		ENST00000326448.11_1_3:160117054-160117270:-|nuORF	ENST00000326448.11_1_3:160117054-160117270:-|nuORF	ENST00000326448.11_1_3:160117054-160117270:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78460693359375	2	406.783839	811.553125	0.30634	0.00012461	3.4308	0.0013956	3.7371	0.0015202	406.7851080123586	29.615	1.556	29.525	28.974	30.53	-0.089546					92	35	4	0	0	0	0.85787	1	1863	1863		9.4706	0	1	1963500			21	10078	17	17	23	23					0.13981055150509292
AAALLRMS	8	Unmodified	_AAALLRMS_					0	0	0			REV__nc|ENSG00000145824|O95715|CXCL14	REV__nc|ENSG00000145824|O95715|CXCL14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.8089599609375	2	416.739105	831.463658	0.14103	5.8773E-05	-2.1025	-0.0008762	-1.9615	-0.00081743	416.7377886342128	19.809	0.27658	19.18	19.028	19.305	-0.62961					7	5	2	0	0	0	0.4196	1	557	557		25.45	3.7478	1	25680	+		22	29914	18	18	24	24					0.04118477199494919
AAALLVKMN	9	Unmodified	_AAALLVKMN_					0	0	0			REV__ENST00000561048.1_1_15:64452264-64455191:-|nuORF	REV__ENST00000561048.1_1_15:64452264-64455191:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7774658203125	2	465.775688	929.536823	0.60386	0.00028126	3.3703	0.0015698	3.9742	0.0018511	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.76996	1	8003	8003		33.516	0.70317	1	1082300	+		23	21318	19	19	25	25					0.06923605922111165
AAASSSVPTLR	11	Unmodified	_AAASSSVPTLR_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-3|DST;nc|ENSG00000151914|Q03001-9|DST	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.29296875	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.66929	1	9510	9510		36.447	0.82846	1	1864800			24	5149	20	20	26	26					0.04507939983614051
AAAVGGLVNY	10	Unmodified	_AAAVGGLVNY_					0	0	0		ENST00000475316.5_1_7:65439511-65446985:-|nuORF	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.2535095214844	2	467.753267	933.491981	-1.5655	-0.00073227	1.4243	0.00066624	-0.14117	-6.6032E-05	467.75393782612105	56.605	0.85083	56.605	56.397	57.248	0					52	39	2	0	0	0	0.86763	1	4857	4857		26.693	1.2427	1	386030			25	12320	21	21	27	27					0.022574983804133808
AACGALGQAVP	11	Carbamidomethyl (C)	_AAC(Carbamidomethyl (C))GALGQAVP_	AAC(1)GALGQAVP		AAC(66)GALGQAVP		0	1	0		nc|ENSG00000079337|O95398-2|RAPGEF3	nc|ENSG00000079337|O95398-2|RAPGEF3	nc|ENSG00000079337|O95398-2|RAPGEF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7530212402344	2	507.755484	1013.49641	-0.78055	-0.00039633	-4.026	-0.0020442	-4.8066	-0.0024406	507.75333135770444	62.615	1.2565	63.002	62.534	63.791	0.3878					81	28	4	0	0	0	0.33233	1	6722	6722		66.429	10.925	1	1463300			26	14787	22	22	28	28	197				-0.009793604683068224
AACITQVPCVL	11	Unmodified	_AACITQVPCVL_					0	0	0		ENST00000562727.1_3_16:68299421-68308679:+|nuORF	ENST00000562727.1_3_16:68299421-68308679:+|nuORF	ENST00000562727.1_3_16:68299421-68308679:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.2904663085938	2	559.290845	1116.56714	0.71868	0.00040195	-1.3596	-0.0007604	-0.6409	-0.00035845	559.2899645855562	77.204	0.99672	77.609	77.226	78.222	0.40488					70	25	4	0	0	0	0.31387	1	8758	8758		72.879	8.672	1	3911800			27	13852	23	23	29	29					0.013515965250007866
AADIEDLKYA	10	Unmodified	_AADIEDLKYA_					0	0	0		nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;ENSG00000275066|ENST00000612223|SYNRG	nc|ENSG00000275066|Q9UMZ2-4|SYNRG	nc|ENSG00000275066|Q9UMZ2-4|SYNRG	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.7774658203125	2	554.779679	1107.5448	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.481	1	64.48	63.98	64.98	-0.00078583								0	0	0	0.45132	1	6026	6026		32.812	0	1				28	9000	24	24	30	30					-0.00466588347421748
AAEFGMDNVHD	11	Unmodified	_AAEFGMDNVHD_					0	0	0			REV__nc|ENSG00000123191|P35670-2|ATP7B	REV__nc|ENSG00000123191|P35670-2|ATP7B	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.5021667480469	3	402.501239	1204.48189	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.465	1	56.439	55.939	56.939	-0.026108								0	0	0	0.56276	1	4764	4764		21.032	4.5024	1		+		29	29819	25	25	31	31					-0.11217477407103615
AAEIEPPL	8	Unmodified	_AAEIEPPL_					0	0	0			REV__ENST00000593998.5_1_19:8438821-8439109:+|nuORF	REV__ENST00000593998.5_1_19:8438821-8439109:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2271423339844	2	420.229094	838.443634	0.51188	0.00021511	-3.6208	-0.0015216	-3.1089	-0.0013065	420.22745728477395	76.673	2.5132	76.808	74.515	77.028	0.13478					135	81	3	0	0	0	0.86791	1	7117	7117		28.254	1.5614	1	323390	+		30	24766	26	26	32	32					0.01795004740540662
AAELAVARM	9	Unmodified	_AAELAVARM_					0	0	0		ENST00000261247.13_1_14:59951192-59953485:+|nuORF	ENST00000261247.13_1_14:59951192-59953485:+|nuORF	ENST00000261247.13_1_14:59951192-59953485:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2543640136719	2	466.25512	930.495686	-1.4677	-0.00068433	-1.5144	-0.00070609	-2.9821	-0.0013904	466.2543190866504	60.961	1.1333	60.992	59.95	61.083	0.0312					73	35	3	0	0	0	0.78536	1	5644	5644		29.15	3.6994	1	265390			31	9401	27	27	33	33					0.027658448826400672
AAELLLLLG	9	Unmodified	_AAELLLLLG_					0	0	0		ENSG00000101230|ENST00000262487|ISM1	ENSG00000101230|ENST00000262487|ISM1	ENSG00000101230|ENST00000262487|ISM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7931213378906	2	456.791861	911.569169	-0.85953	-0.00039263	3.5719	0.0016316	2.7123	0.001239	456.7934335420697	36.323	3.5767	36.267	33.824	37.401	-0.055901					213	80	5	0	0	0	0.69914	1	2458	2458		40.573	0	1	4833100			32	1918	28	28	34	34					0.1098471659677216
AAELLLLLG	9	Unmodified	_AAELLLLLG_					0	0	0		ENSG00000101230|ENST00000262487|ISM1	ENSG00000101230|ENST00000262487|ISM1	ENSG00000101230|ENST00000262487|ISM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7932434082031	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.77546	1	2042	2042		31.955	1.4512	1	3484100			33	1918	28	28	35	35					0.1098471659677216
AAELLLLLG	9	Unmodified	_AAELLLLLG_					0	0	0		ENSG00000101230|ENST00000262487|ISM1	ENSG00000101230|ENST00000262487|ISM1	ENSG00000101230|ENST00000262487|ISM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.793212890625	2	456.791861	911.569169	0.17991	8.2183E-05	2.7362	0.0012499	2.9161	0.001332	456.7930101461281	36.153	2.2506	36.256	35.136	37.386	0.10306					210	68	4	0	0	0	0.7932	1	1985	1985		26.796	0	1	3531000			34	1918	28	28	36	36					0.1098471659677216
AAEVGRSKAL	10	Unmodified	_AAEVGRSKAL_					0	0	0			REV__ENST00000589504.1_1_19:34856171-34859700:+|nuORF	REV__ENST00000589504.1_1_19:34856171-34859700:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2907409667969	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.85981	1	10207	10207		35.152	2.3396	1	9038000	+		35	17514	29	29	37	37					0.06628261191792717
AAFKLVAR	8	Unmodified	_AAFKLVAR_					0	0	0			REV__nc|ENSG00000288920|A0A8I5KQE6|RPSA2	REV__nc|ENSG00000288920|A0A8I5KQE6|RPSA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2634582519531	2	438.276712	874.538872	1.624	0.00071176	-2.0116	-0.00088163	-0.3876	-0.00016988	438.2762122214601	35.379	0.9867	35.761	35.326	36.313	0.3812					54	25	3	0	0	0	0.4196	1	2665	2665		30.504	12.179	1	736040	+		36	21452	30	30	38	38					0.09658402722209303
AAFLPYCI	8	Unmodified	_AAFLPYCI_					0	0	0		ENST00000373840.8_1_9:123942493-123942817:-|nuORF	ENST00000373840.8_1_9:123942493-123942817:-|nuORF	ENST00000373840.8_1_9:123942493-123942817:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.23162841796875	2	449.230582	896.446611	0.9656	0.00043378	-0.94662	-0.00042525	0.018983	8.5278E-06	449.2301030462438	83.133	5.5992	83.192	80.121	85.72	0.059158					204	132	2	0	0	0	0.88393	1	8390	8390		33.493	0.68056	1	221730			37	10758	31	31	39	39					-0.005754434063192093
AAGPPGKKGP	10	Unmodified	_AAGPPGKKGP_					0	0	0		ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2561950683594	2	440.255977	878.497401	-0.15821	-6.9655E-05	-1.3141	-0.00057856	-1.4724	-0.00064822	440.25531510537985	67.089	0.61319	67.105	66.828	67.441	0.016205					41	26	2	0	0	0	0.86201	1	6300	6300		24.203	2.2429	1	138210			38	1446	32	32	40	40					0.05329221962892916
AAGPRARI	8	Unmodified	_AAGPRARI_					0	0	0			REV__ENST00000409178.5_1_10:75670551-75671139:-|nuORF	REV__ENST00000409178.5_1_10:75670551-75671139:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2486572265625	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.05	1	115.03	114.53	115.53	-0.02433								0	0	0	0.30252	1	12750	12750		19.36	1.0356	1		+		39	26337	33	33	41	41					0.06959774885547176
AAGWRSPV	8	Unmodified	_AAGWRSPV_					0	0	0		ENST00000392560.6_1_2:174940156-174989039:-|nuORF	ENST00000392560.6_1_2:174940156-174989039:-|nuORF	ENST00000392560.6_1_2:174940156-174989039:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.22772216796875	2	422.22722	842.439886	1.5461	0.00065279	0.34016	0.00014362	1.8862	0.00079642	422.22724496849196	56.714	2.4167	56.747	56.356	58.772	0.033184					164	84	3	0	0	0	0.86288	1	5126	5126		26.796	0	1	1096200			40	11027	34	34	42	42					0.012363797573243573
AAGWVRSP	8	Unmodified	_AAGWVRSP_					0	0	0		ENST00000572067.1_1_16:67918638-67918992:+|nuORF	REV__ENST00000544949.5_1_12:6942900-6943209:+|nuORF	REV__ENST00000544949.5_1_12:6942900-6943209:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.22821044921875	2	422.22722	842.439886	-0.93887	-0.00039642	2.144	0.00090525	1.2051	0.00050883	422.2280284167546	61.398	1.0667	61.414	61.239	62.306	0.015724					73	47	2	0	0	0	0.85277	1	5391	5391		25.45	0	1	807210			41	14007	35	35	43	43					0.012363797573243573
AAHVLPGAP	9	Unmodified	_AAHVLPGAP_					0	0	0		ENST00000368347.8_1_1:155294072-155294639:+|nuORF	ENST00000368347.8_1_1:155294072-155294639:+|nuORF	ENST00000368347.8_1_1:155294072-155294639:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	416.7369689941406	2	416.73742	831.460287	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.284	1	35.322	34.822	35.822	0.038643								0	0	0	0.32542	1	1843	1843		21.702	1.2205	1				42	10593	36	36	44	44					0.03781550417136259
AAIIFTVSVAL	11	Unmodified	_AAIIFTVSVAL_					0	0	0		nc|ENSG00000022567|Q5BKX6-2|SLC45A4;nc|ENSG00000022567|Q5BKX6|SLC45A4;nc|ENSG00000022567|Q5BKX6-3|SLC45A4;ENSG00000022567|ENST00000517878|SLC45A4	nc|ENSG00000022567|Q5BKX6-2|SLC45A4	nc|ENSG00000022567|Q5BKX6-2|SLC45A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8341674804688	2	552.8368	1103.65905	-0.74602	-0.00041243	-4.1168	-0.0022759	-4.8628	-0.0026884	552.8344221073519	82.073	1.2669	82.073	81.549	82.816	0					61	32	2	0	0	0	0.63176	1	7615	7615		40.778	1.5253	1	174970			43	852	37	37	45	45					0.11136346205330483
AAIIVPIKS	9	Unmodified	_AAIIVPIKS_					0	0	0			REV__ENST00000407916.2_1_7:55001700-55002231:+|nuORF	REV__ENST00000407916.2_1_7:55001700-55002231:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3006591796875	2	456.299853	910.585153	0.25824	0.00011784	2.0816	0.00094982	2.3398	0.0010677	456.3006554004226	45.028	1.9814	45.077	44.089	46.07	0.048996					97	49	3	0	0	0	0.7932	1	3335	3335		21.96	2.5999	1	456360	+		44	26320	38	38	46	46					0.12628422833643071
AAILGSRAW	9	Unmodified	_AAILGSRAW_					0	0	0		ENST00000483270.1_1_1:15886792-15891842:+|nuORF	ENST00000483270.1_1_1:15886792-15891842:+|nuORF	ENST00000483270.1_1_1:15886792-15891842:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.76666259765625	2	472.769252	943.52395	-0.41041	-0.00019403	-3.7134	-0.0017556	-4.1238	-0.0019496	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.7932	1	8637	8637		20.947	2.6225	1	590200			45	12506	39	39	47	47					0.04992910854218735
AAILKLAI	8	Unmodified	_AAILKLAI_					0	0	0			REV__nc|ENSG00000169891|Q8NFH8-4|REPS2	REV__nc|ENSG00000169891|Q8NFH8-4|REPS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7852478027344	2	406.783839	811.553125	-0.34246	-0.00013931	4.1924	0.0017054	3.85	0.0015661	406.78540084150717	29.66	1.7951	29.616	28.901	30.696	-0.043095					140	52	4	0	0	0	0.80963	1	1557	1557		15.636	0.97212	1	985720	+		46	21612	40	40	48	48					0.13981055150486554
AAIVRSLNN	9	Unmodified	_AAIVRSLNN_					0	0	0			REV__ENST00000510626.5_1_4:3131970-3189635:+|nuORF	REV__ENST00000510626.5_1_4:3131970-3189635:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773132324219	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.76764	1	8250	8250		34.173	0.65696	1	2046100	+		47	27956	41	41	49	49					0.06031992020314192
AAKGLKGSTAK	11	Unmodified	_AAKGLKGSTAK_					0	0	0			REV__ENST00000379818.3_1_16:56666150-56666540:+|nuORF	REV__ENST00000379818.3_1_16:56666150-56666540:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3140869140625	2	516.314023	1030.61349	-0.63969	-0.00033028	0.85314	0.00044049	0.21345	0.00011021	516.3144152653146	102.55	1.0925	102.55	101.98	103.08	0					67	27	3	0	0	0	0.70737	1	10445	10445		30.318	2.4355	1	640710	+		48	25929	42	42	50	50					0.09941120742928433
AAKIIIIR	8	Unmodified	_AAKIIIIR_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.3143310546875	2	449.315838	896.617122	0.030616	1.3756E-05	-2.674	-0.0012015	-2.6434	-0.0011877	449.3144775449266	21.709	1.5646	21.081	20.162	21.727	-0.62835					91	40	3	0	0	0	0.86288	1	795	795		26.796	6.3143	1	615330			49	14696	43	43	51	51					0.16467835307480527
AAKKGKSK	8	Unmodified	_AAKKGKSK_					0	0	0			REV__nc|ENSG00000067445|Q12816-2|TRO	REV__nc|ENSG00000067445|Q12816-2|TRO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.5666198730469	2	409.266345	816.518136	0.0089489	3.6625E-06	-2.2453	-0.00091894	-2.2364	-0.00091527	409.26427298870544	59.26	0.20611	59.651	59.483	59.689	0.39077					5	4	2	0	0	0	0.4196	1	6234	6234		8.2313	0	1	52462	+		50	16543	44	44	52	52					0.10253812342557467
AAKKVAVK	8	Unmodified	_AAKKVAVK_					0	0	0		ENSG00000109705|ENST00000382438|NKX3-2	ENSG00000109705|ENST00000382438|NKX3-2	ENSG00000109705|ENST00000382438|NKX3-2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7850036621094	2	407.779088	813.543623	0.12247	4.994E-05	-1.0632	-0.00043353	-0.94068	-0.00038359	407.7787225892341	30.16	0.34981	30.07	29.917	30.267	-0.089544					9	7	2	0	0	0	0.4196	1	1949	1949		12.959	8.9739	1	25523			51	2479	45	45	53	53					0.12939286864980204
AAKLLLLA	8	Unmodified	_AAKLLLLA_					0	0	0			REV__ENST00000370918.8_1_6:53160486-53213718:-|nuORF	REV__ENST00000370918.8_1_6:53160486-53213718:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	2	406.783839	811.553125	-0.34246	-0.00013931	4.1924	0.0017054	3.85	0.0015661	406.78540084150717	29.66	1.7951	29.616	28.901	30.696	-0.043095					140	52	4	0	0	0	0.82464	1	1545	1545		21.702	0	1	985720	+		52	25672	46	46	54	54					0.1398105515052066
AAKLLQKQLNL	11	Unmodified	_AAKLLQKQLNL_					0	0	0		ENST00000522080.5_1_3:169513982-169530312:-|nuORF;ENSG00000171757|ENST00000446859|LRRC34;ENST00000520726.1_1_3:169521807-169526495:-|nuORF;nc|ENSG00000171757|Q8IZ02-3|LRRC34	ENST00000522080.5_1_3:169513982-169530312:-|nuORF	ENST00000522080.5_1_3:169513982-169530312:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.932373046875	3	413.930962	1238.77106	0.12638	5.2312E-05	4.0621	0.0016814	4.1884	0.0017337	413.93257989675	45.178	2.8999	45.16	43.533	46.433	-0.018585					218	68	4	0	0	0	0.73621	1	3505	3505		25.126	1.7481	1	518900			53	6704	47	47	55	55					0.1612220028232514
AAKLLQKQLNL	11	Unmodified	_AAKLLQKQLNL_					0	0	0		ENST00000522080.5_1_3:169513982-169530312:-|nuORF;ENSG00000171757|ENST00000446859|LRRC34;ENST00000520726.1_1_3:169521807-169526495:-|nuORF;nc|ENSG00000171757|Q8IZ02-3|LRRC34	ENST00000522080.5_1_3:169513982-169530312:-|nuORF	ENST00000522080.5_1_3:169513982-169530312:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9325256347656	3	413.930962	1238.77106	1.6433	0.00068023	2.1649	0.00089611	3.8082	0.0015763	413.9318142026393	43.114	2.2589	43.114	42.157	44.416	0.00016785					149	54	3	0	0	0	0.75906	1	3304	3304		20.03	2.8637	1	500010			54	6704	47	47	56	56					0.1612220028232514
AAKPPISK	8	Unmodified	_AAKPPISK_					0	0	0		ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENSG00000156802|ENST00000287394|ATAD2	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2572021484375	2	406.255446	810.496338	0.12581	5.111E-05	3.5587	0.0014458	3.6846	0.0014969	406.25676185595603	33.224	0.95024	33.334	33.07	34.021	0.10991					93	41	3	0	0	0	0.82658	1	1633	1633		21.96	1.4781	1	425420			55	5393	48	48	57	57					0.08351007593989834
AAKRILAAF	9	Unmodified	_AAKRILAAF_					0	0	0			REV__nc|ENSG00000052749|Q5JTH9-2|RRP12	REV__nc|ENSG00000052749|Q5JTH9-2|RRP12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8017272949219	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.7932	1	9703	9703		25.45	1.2474	1	7439400	+		56	29691	49	49	58	58					0.11022360785023011
AAKTRKQA	8	Unmodified	_AAKTRKQA_					0	0	0		ENSG00000206181|ENST00000332567|ELOA2	ENSG00000206181|ENST00000332567|ELOA2	ENSG00000206181|ENST00000332567|ELOA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26544189453125	2	437.266876	872.519199	0.61137	0.00026733	-3.2	-0.0013992	-2.5886	-0.0011319	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.85277	1	901	901		25.45	4.9683	1	1313200			57	8554	50	50	59	59					0.0778402671146523
AAKVSRKGAS	10	Unmodified	_AAKVSRKGAS_					0	0	0			REV__ENST00000367025.7_1_1:209933439-209933502:+|nuORF	REV__ENST00000367025.7_1_1:209933439-209933502:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7906799316406	2	487.790715	973.566878	-1.0481	-0.00051127	1.0168	0.00049598	-0.03133	-1.5283E-05	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.86698	1	7966	7966		28.081	2.5074	1	1176800	+		58	25544	51	51	60	60					0.07903680911658739
AAKVVILV	8	Unmodified	_AAKVVILV_					0	0	0		ENSG00000101203|ENST00000358894|COL20A1;nc|ENSG00000101203|Q9P218-2|COL20A1;nc|ENSG00000101203|Q9P218-3|COL20A1;ENST00000479501.5_1_20:61926459-61943880:+|nuORF	ENSG00000101203|ENST00000358894|COL20A1	ENSG00000101203|ENST00000358894|COL20A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.785400390625	2	406.783839	811.553125	0.20394	8.2959E-05	3.6434	0.0014821	3.8473	0.001565	406.7851787446003	29.647	1.7935	29.678	29.075	30.869	0.030947					149	52	4	0	0	0	0.81548	1	1526	1526		20.482	4.8456	1	789640			59	1912	52	52	61	61					0.1398105515052066
AAKVVILV	8	Unmodified	_AAKVVILV_					0	0	0		ENSG00000101203|ENST00000358894|COL20A1;nc|ENSG00000101203|Q9P218-2|COL20A1;nc|ENSG00000101203|Q9P218-3|COL20A1;ENST00000479501.5_1_20:61926459-61943880:+|nuORF	ENSG00000101203|ENST00000358894|COL20A1	ENSG00000101203|ENST00000358894|COL20A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7854309082031	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.80963	1	1431	1431		15.636	1.8609	1	1817700			60	1912	52	52	62	62					0.1398105515052066
AALAAPHSKAS	11	Unmodified	_AALAAPHSKAS_					0	0	0		ENST00000472789.1_1_7:150936247-150937287:-|nuORF	ENST00000472789.1_1_7:150936247-150937287:-|nuORF	ENST00000472789.1_1_7:150936247-150937287:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.2830200195312	2	512.282723	1022.55089	0.68771	0.0003523	-3.3979	-0.0017407	-2.7102	-0.0013884	512.280910573943	86.397	3.3825	86.546	85.297	88.68	0.14902					148	79	2	0	0	0	0.67778	1	8424	8424		35.152	2.3396	1	371240			61	12269	53	53	63	63					0.040519746747463614
AALAGPRR	8	Unmodified	_AALAGPRR_					0	0	0			REV__ENSG00000164794|ENST00000524391|KCNV1	REV__ENSG00000164794|ENST00000524391|KCNV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2489013671875	2	406.248486	810.48242	3.1451	0.0012777	-2.8339	-0.0011513	0.31112	0.00012639	406.2472569987741	110.94	0.91206	110.99	110.73	111.64	0.054062					48	31	2	0	0	0	0.82464	1	13455	13455		21.702	1.2205	1	457940	+		62	21115	54	54	64	64					0.06959774885547176
AALAREASTM	10	Unmodified	_AALAREASTM_					0	0	0			REV__ENST00000566774.1_1_16:68264768-68266536:-|nuORF;REV__nc|ENSG00000103067|Q9H6T0|ESRP2	REV__ENST00000566774.1_1_16:68264768-68266536:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.2619934082031	2	510.760766	1019.50698	0.055106	2.8146E-05	-3.6139	-0.0018458	-3.5588	-0.0018177	510.7592008059974	28.508	0.59175	28.487	28.117	28.709	-0.021439					11	9	2	0	0	0	0.86718	1	1367	1367		27.882	1.0861	1	25369	+		63	28874;17386	55	55	65	65					-0.001993778138853486
AALARNLAGG	10	Unmodified	_AALARNLAGG_					0	0	0			REV__nc|ENSG00000143674|Q5TCX8-2|MAP3K21	REV__nc|ENSG00000143674|Q5TCX8-2|MAP3K21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2628173828125	2	457.264333	912.514114	-0.11988	-5.4815E-05	0.13028	5.9574E-05	0.010409	4.7595E-06	457.26428644836	79.385	2.7838	79.935	78.442	81.226	0.54945					170	65	4	0	0	0	0.84112	1	9077	9077		37.159	2.9866	1	1064700	+		64	19833	56	56	66	66					0.05435722848858404
AALCLLRL	8	Unmodified	_AALCLLRL_					0	0	0		nc|ENSG00000183020|O94973-3|AP2A2;ENSG00000183020|ENST00000448903|AP2A2;nc|ENSG00000183020|O94973-2|AP2A2;ENSG00000196961|ENST00000354293|AP2A1;nc|ENSG00000196961|O95782|AP2A1;ENST00000600199.1_1_19:50270291-50299453:+|nuORF	nc|ENSG00000183020|O94973-3|AP2A2;ENST00000600199.1_1_19:50270291-50299453:+|nuORF	ENST00000600199.1_1_19:50270291-50299453:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77362060546875	2	436.772948	871.531344	-1.6288	-0.0007114	3.5009	0.0015291	1.8721	0.0008177	436.7743504876495	26.927	0.91903	26.994	26.723	27.642	0.066877					84	43	3	0	0	0	0.81548	1	1051	1051		20.482	2.1574	1	198510			65	7493;14379	57	57	67	67					0.0904392713028983
AALDLRAWAE	10	Unmodified	_AALDLRAWAE_					0	0	0			REV__nc|ENSG00000198033|P0DPH7-2|TUBA3C	REV__nc|ENSG00000198033|P0DPH7-2|TUBA3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.295654296875	2	558.29583	1114.57711	0.81217	0.00045343	-3.9453	-0.0022026	-3.1331	-0.0017492	558.2935445173563	30.567	0.41573	30.556	30.334	30.75	-0.010656					14	10	2	0	0	0	0.54701	1	1622	1622		52.937	3.4952	1	29359	+		66	30143	58	58	68	68					0.02440243846217527
AALDLRAWAE	10	Unmodified	_AALDLRAWAE_					0	0	0			REV__nc|ENSG00000198033|P0DPH7-2|TUBA3C	REV__nc|ENSG00000198033|P0DPH7-2|TUBA3C	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	558.29583	1114.57711	0.22475	0.00012548	-5.5412	-0.0030936	-5.3164	-0.0029681	558.2928066412379	30.379	0.075079	30.491	30.443	30.518	0.11225	-0.031686	-0.0026321	NaN	52.937	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24422	+		67	30143	58	58							0.02440243846217527
AALGALPLL	9	Unmodified	_AALGALPLL_					0	0	0		ENSG00000184709|ENST00000371542|LRRC26	ENSG00000184709|ENST00000371542|LRRC26	ENSG00000184709|ENST00000371542|LRRC26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7749328613281	2	419.773471	837.53239	2.2196	0.00093172	1.7406	0.00073065	3.9602	0.0016624	419.7741067165764	52.137	1.9692	52.15	50.995	52.964	0.01244					76	47	2	0	0	0	0.78292	1	4547	4547		29.842	7.8817	1	186930			68	7640	59	59	69	69					0.10712464770847419
AALGLRSPLPT	11	Unmodified	_AALGLRSPLPT_					0	0	0			REV__ENST00000388995.10_2_17:18873583-18873697:-|nuORF	REV__ENST00000388995.10_2_17:18873583-18873697:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.3287963867188	2	548.329673	1094.64479	-1.2887	-0.00070661	1.1439	0.00062723	-0.14475	-7.9373E-05	548.3301434974741	27.778	1.2267	27.681	27.316	28.542	-0.096945					87	28	5	0	0	0	0.43778	1	1676	1676		56.434	10.482	1	1674600	+		69	25991	60	60	70	70					0.10125693777035849
AALHKCLVK	9	Unmodified	_AALHKCLVK_					0	0	0			REV__nc|ENSG00000100938|Q9P2T1-3|GMPR2	REV__nc|ENSG00000100938|Q9P2T1-3|GMPR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7961730957031	2	491.796955	981.579357	0.019467	9.5736E-06	-2.2906	-0.0011265	-2.2711	-0.0011169	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.78536	1	4487	4487		29.15	2.3535	1	310050	+		70	29741	61	61	71	71					0.08783001050335315
AALIRVARLQV	11	Unmodified	_AALIRVARLQV_					0	0	0			REV__nc|ENSG00000143552|Q5VU65-2|NUP210L	REV__nc|ENSG00000143552|Q5VU65-2|NUP210L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.92962646484375	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.7896	1	3958	3958		13.508	1.3013	1	2612300	+		71	19821	62	62	72	72					0.17569039722025082
AALIRVARLQV	11	Unmodified	_AALIRVARLQV_					0	0	0			REV__nc|ENSG00000143552|Q5VU65-2|NUP210L	REV__nc|ENSG00000143552|Q5VU65-2|NUP210L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9296875	3	403.931185	1208.77173	-1.067	-0.00043099	-3.6376	-0.0014693	-4.7046	-0.0019003	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.75921	1	4183	4183		17.833	4.8757	1	5907700	+		72	19821	62	62	73	73					0.17569039722025082
AALKWDLR	8	Unmodified	_AALKWDLR_					0	0	0			REV__ENSG00000180638|ENST00000433844|SLC47A2	REV__ENSG00000180638|ENST00000433844|SLC47A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.7852783203125	2	486.784902	971.55525	-1.658	-0.00080709	0.33364	0.00016241	-1.3244	-0.00064467	486.78485160935173	103.72	0.67829	103.83	103.57	104.25	0.11494					24	16	2	0	0	0	0.88185	1	10929	10929		32.812	2.3088	1	305700	+		73	22406	63	63	74	74					0.0683348388831746
AALLKARAVSD	11	Unmodified	_AALLKARAVSD_					0	0	0		ENST00000489293.5_1_7:116770554-116838385:+|nuORF;nc|ENSG00000004866|Q9NRC1-7|ST7;ENST00000487459.5_1_7:116660544-116830896:+|nuORF;nc|ENSG00000004866|Q9NRC1-6|ST7;nc|ENSG00000004866|Q9NRC1-5|ST7;nc|ENSG00000004866|Q9NRC1-4|ST7;nc|ENSG00000004866|Q9NRC1-3|ST7;nc|ENSG00000004866|Q9NRC1-2|ST7;ENSG00000004866|ENST00000323984|ST7;nc|ENSG00000004866|Q9NRC1|ST7	ENST00000489293.5_1_7:116770554-116838385:+|nuORF	ENST00000489293.5_1_7:116770554-116838385:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.8287353515625	2	557.83258	1113.65061	0.35884	0.00020017	-3.5133	-0.0019598	-3.1545	-0.0017597	557.8305500141807	100.81	1.6091	101.01	100.54	102.15	0.2058					76	38	3	0	0	0	0.7144	1	10535	10535		29.17	2.4771	1	1006700			74	667	64	64	75	75					0.09832792288693781
AALLLALK	8	Unmodified	_AALLLALK_					0	0	0			REV__ENSG00000130433|ENST00000252729|CACNG6	REV__ENSG00000130433|ENST00000252729|CACNG6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7853698730469	2	406.783839	811.553125	2.7329	0.0011117	1.0571	0.00043001	3.79	0.0015417	406.7841375125675	29.651	1.9122	29.636	28.895	30.807	-0.015167					147	57	4	0	0	0	0.85787	1	1513	1513		9.4706	0.64823	1	914260	+		75	18874	65	65	76	76					0.13981055150497923
AALLQPRRRSR	11	Unmodified	_AALLQPRRRSR_					0	0	0			REV__ENST00000278426.7_2_11:57281475-57283007:-|nuORF	REV__ENST00000278426.7_2_11:57281475-57283007:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2745666503906	3	441.940855	1322.80073	0.33265	0.00014701	-2.7256	-0.0012046	-2.393	-0.0010575	441.9395069624772	55.282	1.2267	55.373	54.736	55.962	0.091167					101	37	4	0	0	0	0.74771	1	4649	4649		22.562	0.87584	1	451030	+		76	24593	66	66	77	77					0.1522457707101239
AALPDILV	8	Unmodified	_AALPDILV_					0	0	0			REV__ENSG00000182415|ENST00000250838|CDY2A	REV__ENSG00000182415|ENST00000250838|CDY2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2480773925781	2	406.249829	810.485105	-1.8094	-0.00073505	-0.74363	-0.0003021	-2.553	-0.0010372	406.2494235031066	90.628	2.0567	90.845	90.343	92.4	0.21736					110	49	3	0	0	0	0.87276	1	9074	9074		29.842	0	1	1054100	+		77	18836	67	67	78	78					0.07228185499843676
AALPVRAM	8	Unmodified	_AALPVRAM_					0	0	0		ENSG00000196371|ENST00000358752|FUT4	ENSG00000196371|ENST00000358752|FUT4	ENSG00000196371|ENST00000358752|FUT4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	414.7615661621094	2	414.741648	827.468743	-1.9066	-0.00079073	1.8239	0.00075646	-0.082621	-3.4266E-05	414.7421779319194	88.346	0.24139	88.515	88.415	88.657	0.16923					6	5	2	0	0	0	0.4196	1	8722	8722		42.474	25.109	1	80233			78	8046	68	68	79	79					0.04810781062110436
AALRTPTPA	9	Unmodified	_AALRTPTPA_					0	0	0		nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-9|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;ENSG00000112531|ENST00000361752|QKI	nc|ENSG00000112531|Q96PU8-5|QKI	nc|ENSG00000112531|Q96PU8-5|QKI	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2603454589844	2	449.261259	896.507966	-1.3148	-0.0005907	-0.24675	-0.00011085	-1.5616	-0.00070155	449.26091050300573	68.569	0.72878	68.705	68.381	69.11	0.13522					52	29	2	0	0	0	0.77546	1	6150	6150		31.955	6.5047	1	207860			79	2667	69	69	80	80					0.05557204617309708
AALSEAPVRT	10	Unmodified	_AALSEAPVRT_					0	0	0			REV__ENST00000574857.1_1_17:2275854-2276226:+|nuORF	REV__ENST00000574857.1_1_17:2275854-2276226:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.7819519042969	2	507.782556	1013.55056	-1.7124	-0.00086954	1.5321	0.00077796	-0.18035	-9.1578E-05	507.78325307714454	32.01	0.63246	32.01	31.823	32.456	0					41	23	3	0	0	0	0.86471	1	1568	1568		30.318	3.6248	1	92283	+		80	28977	70	70	81	81					0.04432554954905754
AALSRPAQGG	10	Unmodified	_AALSRPAQGG_					0	0	0			REV__ENST00000505443.1_1_5:3531983-3536103:-|nuORF	REV__ENST00000505443.1_1_5:3531983-3536103:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.25390625	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.82886	1	8678	8678		37.812	0.65241	1	1673200	+		81	27881	71	71	82	82					0.027191324691898444
AAMEQYILYLV	11	Unmodified	_AAMEQYILYLV_					0	0	0		nc|ENSG00000169242|P20827-2|EFNA1;ENST00000474413.5_1_1:155102304-155106540:+|nuORF;ENST00000497282.1_1_1:155103761-155106540:+|nuORF;ENSG00000169242|ENST00000368407|EFNA1;ENST00000469878.5_1_1:155100369-155106166:+|nuORF	nc|ENSG00000169242|P20827-2|EFNA1	nc|ENSG00000169242|P20827-2|EFNA1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.5633239746094	3	438.56518	1312.67371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.316	1	62.437	61.937	62.937	0.1209								0	0	0	0.56276	1	5430	5430		26.063	0.9374	1				82	6480	72	72	83	83					0.029880502911737494
AAMPQIKLLLQ	11	Unmodified	_AAMPQIKLLLQ_					0	0	0			REV__ENST00000581104.5_1_17:73208151-73231006:+|nuORF	REV__ENST00000581104.5_1_17:73208151-73231006:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.25030517578125	3	409.249415	1224.72641	1.024	0.00041908	-1.9883	-0.0008137	-0.96426	-0.00039462	409.2485717697956	27.976	0.9158	27.721	27.368	28.284	-0.25465					42	21	3	0	0	0	0.74771	1	1682	1682		22.562	0.87584	1	127400	+		83	29043	73	73	84	84					0.12304053144634963
AANRLIKN	8	Unmodified	_AANRLIKN_					0	0	0		ENSG00000103365|ENST00000309859|GGA2	ENSG00000103365|ENST00000309859|GGA2	ENSG00000103365|ENST00000309859|GGA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2740173339844	2	450.274701	898.534849	-1.7762	-0.00079979	1.8456	0.00083102	0.069358	3.123E-05	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.80706	1	12137	12137		19.36	0	1	2494900			84	2079	74	74	85	85					0.08152313228526964
AAPAGGRAVPG	11	Unmodified	_AAPAGGRAVPG_					0	0	0		ENST00000298316.6_1_14:50360028-50360277:+|nuORF	ENST00000298316.6_1_14:50360028-50360277:+|nuORF	ENST00000298316.6_1_14:50360028-50360277:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.2552795410156	2	462.256508	922.498464	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.912	1	47.835	47.335	48.335	0.92315								0	0	0	0.56276	1	4456	4456		42.396	5.237	1				85	9772	75	75	86	86					0.03411436331805362
AAPHSLLFLFL	11	Unmodified	_AAPHSLLFLFL_					0	0	0		ENST00000485233.1_1_7:23637404-23637668:+|nuORF	ENST00000485233.1_1_7:23637404-23637668:+|nuORF	ENST00000485233.1_1_7:23637404-23637668:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	410.24261474609375	3	410.241137	1227.70158	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.109	1	15.51	15.01	16.01	-0.59873								0	0	0	0.56276	1	89	89		24.232	3.1996	1				86	12550	76	76	87	87					0.09683741333560647
AAPKVSPH	8	Unmodified	_AAPKVSPH_					0	0	0		ENSG00000163568|ENST00000368130|AIM2;ENST00000481829.5_1_1:159035725-159038438:-|nuORF	ENSG00000163568|ENST00000368130|AIM2	ENSG00000163568|ENST00000368130|AIM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.7308654785156	2	403.729595	805.444637	1.7257	0.0006967	0.41632	0.00016808	2.142	0.00086478	403.7296654256628	99.693	1.8198	100.06	99.055	100.87	0.36292					95	45	3	0	0	0	0.86288	1	12058	12058		26.796	1.3459	1	752370			87	5828	77	77	88	88					0.03413263900097263
AAPLAVLLG	9	Unmodified	_AAPLAVLLG_					0	0	0			REV__ENST00000409781.1_1_2:87016528-87017758:-|nuORF	REV__ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7651672363281	2	412.765646	823.516739	-1.3459	-0.00055553	3.4065	0.0014061	2.0606	0.00085056	412.76701040612045	40.372	1.7448	40.328	39.579	41.324	-0.043694					94	45	3	0	0	0	0.7932	1	3010	3010		21.702	0	1	625910	+		88	24619	78	78	89	89					0.09792178253826478
AAPLLTGLL	9	Unmodified	_AAPLLTGLL_					0	0	0			REV__nc|ENSG00000166923|O60565-2|GREM1	REV__nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.76402	1	2474	2474		35.201	6.9464	1	7451800	+		89	21338	79	79	90	90					0.10388447425293634
AAPLLTGLL	9	Unmodified	_AAPLLTGLL_					0	0	0			REV__nc|ENSG00000166923|O60565-2|GREM1	REV__nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7740783691406	2	434.778754	867.542954	-1.4872	-0.00064659	2.9694	0.001291	1.4823	0.00064445	434.7799081673859	43.398	0.96524	44.172	43.498	44.463	0.7738					64	23	3	0	0	0	0.7932	1	3964	3964		20.482	1.1219	1	2227600	+		90	21338	79	79	91	91					0.10388447425293634
AAPLLVAVA	9	Unmodified	_AAPLLVAVA_					0	0	0		nc|ENSG00000171105|P06213-2|INSR;ENSG00000171105|ENST00000302850|INSR	nc|ENSG00000171105|P06213-2|INSR	nc|ENSG00000171105|P06213-2|INSR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2707214355469	2	412.765646	823.516739	-0.74501	-0.00030751	1.9412	0.00080124	1.1962	0.00049373	412.76752343174905	51.726	2.8281	51.703	50.733	53.561	-0.02343					117	74	2	0	0	0	0.7932	1	4547	4547		21.702	4.3374	1	194350			91	6639	80	80	92	92					0.0979217825380374
AAPLRRSP	8	Unmodified	_AAPLRRSP_					0	0	0		ENST00000530897.1_1_11:1331247-1331481:+|nuORF	ENST00000530897.1_1_11:1331247-1331481:+|nuORF	ENST00000530897.1_1_11:1331247-1331481:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7801818847656	2	434.261594	866.508634	-1.6595	-0.00072067	-2.3503	-0.0010207	-4.0099	-0.0017413	434.2616470941259	36.87	0.2383	36.894	36.791	37.029	0.023621					7	5	2	0	0	0	0.4196	1	2072	2072		25.45	0	1	25372			92	13349	81	81	93	93					0.07004044057032388
AAPLTRRA	8	Unmodified	_AAPLTRRA_					0	0	0			REV__ENST00000343218.9_2_5:146889424-146889604:-|nuORF	REV__ENST00000343218.9_2_5:146889424-146889604:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2615966796875	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.86288	1	9497	9497		26.796	2.5934	1	55300000	+		93	25291	82	82	94	94					0.0755604405703707
AAPLVRGRRP	10	Unmodified	_AAPLVRGRRP_					0	0	0			REV__ENST00000177694.1_1_17:45810693-45811185:+|nuORF	REV__ENST00000177694.1_1_17:45810693-45811185:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.840087890625	2	546.841074	1091.66759	0.19665	0.00010754	-2.8678	-0.0015682	-2.6712	-0.0014607	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.86589	2	10549	10549;10585		29.15	2.3535	1	55511000	+		94	24086	83	83	95;96	95					0.12542757685173456
AAPLVRGRRP	10	Unmodified	_AAPLVRGRRP_					0	0	0			REV__ENST00000177694.1_1_17:45810693-45811185:+|nuORF	REV__ENST00000177694.1_1_17:45810693-45811185:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8400268554688	2	546.841074	1091.66759	0.84844	0.00046396	-3.1925	-0.0017458	-2.3441	-0.0012818	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.86589	1	10554	10554		29.15	4.9468	1	43597000	+		95	24086	83	83	97	97					0.12542757685173456
AAPLVRGRRP	10	Unmodified	_AAPLVRGRRP_					0	0	0			REV__ENST00000177694.1_1_17:45810693-45811185:+|nuORF	REV__ENST00000177694.1_1_17:45810693-45811185:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8407592773438	2	546.841074	1091.66759	-1.4624	-0.00079971	-0.92504	-0.00050585	-2.3875	-0.0013056	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.84112	1	10774	10774		37.159	4.3467	1	44929000	+		96	24086	83	83	98	98					0.12542757685173456
AAPLVRGRRP	10	Unmodified	_AAPLVRGRRP_					0	0	0			REV__ENST00000177694.1_1_17:45810693-45811185:+|nuORF	REV__ENST00000177694.1_1_17:45810693-45811185:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8406372070312	2	546.841074	1091.66759	0.96702	0.0005288	-2.8806	-0.0015752	-1.9136	-0.0010464	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.84112	2	12238	12154;12238		37.159	3.6994	1	9124000	+		97	24086	83	83	99;100	100					0.12542757685173456
AAPPGQRF	8	Unmodified	_AAPPGQRF_					0	0	0		nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4;ENSG00000242419|ENST00000306593|PCDHGC4	nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4	nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2283630371094	2	422.22722	842.439886	-1.7987	-0.00075945	3.6985	0.0015616	1.8999	0.00080217	422.2287015198112	64.24	0.93478	64.36	64.014	64.949	0.12005					82	33	3	0	0	0	0.83466	2	5631	5624;5631		29.842	5.3375	1	614800			98	8799	84	84	101;102	102					0.012363797573243573
AAPPGQRF	8	Unmodified	_AAPPGQRF_					0	0	0		nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4;ENSG00000242419|ENST00000306593|PCDHGC4	nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4	nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.22802734375	2	422.22722	842.439886	0.40511	0.00017105	1.6054	0.00067786	2.0105	0.00084891	422.2277865836404	64.332	1.1229	64.456	64.031	65.154	0.12397					101	41	4	0	0	0	0.90024	1	5694	5694		39.021	12.329	1	502100			99	8799	84	84	103	103					0.012363797573243573
AAPQVLESPF	10	Unmodified	_AAPQVLESPF_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7819213867188	2	529.779482	1057.54441	0.065511	3.4706E-05	2.8466	0.0015081	2.9121	0.0015428	529.7807903370734	52.522	1.485	53.136	52.584	54.069	0.61446					111	35	5	0	0	0	0.8608	1	5245	5245		34.173	0	1	6729200	+		100	17017	85	85	104	104					0.017940367233904908
AAPSALLLL	9	Unmodified	_AAPSALLLL_					0	0	0		nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1;ENST00000555607.1_1_14:45431624-45475488:+|nuORF;nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1;nc|ENSG00000198718|Q9Y4F4|TOGARAM1;ENSG00000198718|ENST00000361462|TOGARAM1;ENST00000555945.1_1_14:45431624-45465140:+|nuORF	nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1	nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78021240234375	2	434.778754	867.542954	-0.10471	-4.5526E-05	3.4241	0.0014887	3.3194	0.0014432	434.7801797688748	34.455	0.9535	34.45	33.903	34.857	-0.0047417					93	22	5	0	0	0	0.77546	1	2076	2076		31.955	5.1588	1	2846000			101	8312	86	86	105	105					0.10388447425293634
AAPSMKVF	8	Unmodified	_AAPSMKVF_					0	0	0			REV__ENST00000356842.8_1_2:60689463-60695893:-|nuORF	REV__ENST00000356842.8_1_2:60689463-60695893:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.7747497558594	2	425.728206	849.44186	0.17581	7.4847E-05	-2.9088	-0.0012384	-2.733	-0.0011635	425.7283460613033	38.842	0.28959	38.937	38.792	39.082	0.094322					10	7	2	0	0	0	0.4196	1	2321	2321		57.811	37.329	1	19968	+		102	25395	87	87	106	106					0.011116724509292908
AAPTICYLNLY	11	Unmodified	_AAPTICYLNLY_					0	0	0			REV__ENST00000558902.5_1_15:52548900-52571163:-|nuORF	REV__ENST00000558902.5_1_15:52548900-52571163:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.31396484375	2	621.315374	1240.6162	-0.2911	-0.00018087	-2.2058	-0.0013705	-2.4969	-0.0015514	621.3138090299801	68.828	0.73877	68.854	68.562	69.301	0.02636					77	31	4	0	0	0	0.48529	1	6499	6499		52.937	6.9645	1	456890	+		103	28740	88	88	107	107					0.005512080855851309
AAPVVRRVKVT	11	Unmodified	_AAPVVRRVKVT_					0	0	0		ENST00000474900.5_1_11:132177611-132182586:+|nuORF;ENST00000490356.2_1_11:132177611-132182375:+|nuORF;nc|ENSG00000182667|Q9P121-3|NTM;nc|ENSG00000182667|Q9P121|NTM;nc|ENSG00000182667|Q9P121-2|NTM;nc|ENSG00000182667|Q9P121-4|NTM;ENSG00000182667|ENST00000683400|NTM	ENST00000474900.5_1_11:132177611-132182586:+|nuORF	ENST00000474900.5_1_11:132177611-132182586:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.3807373046875	2	598.385314	1194.75608	-2.4045	-0.0014388	-4.123	-0.0024671	-6.5275	-0.0039059	598.3827122218626	40.848	1.3552	40.855	40.235	41.59	0.0065727					86	35	3	0	0	0	0.7434	1	2955	2955		23.523	7.8809	1	583190			104	7468	89	89	108	108					0.16648753204981404
AAQEADCSN	9	Unmodified	_AAQEADCSN_					0	0	0		ENST00000540458.5_1_12:6950163-6950600:+|nuORF;ENST00000542868.1_1_12:6950213-6950600:+|nuORF	ENST00000540458.5_1_12:6950163-6950600:+|nuORF	ENST00000540458.5_1_12:6950163-6950600:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.67327880859375	2	454.674356	907.33416	0.49299	0.00022415	-2.326	-0.0010576	-1.833	-0.00083344	454.6730997190694	30.696	0.39897	30.685	30.443	30.842	-0.010656					18	10	2	0	0	0	0.77244	1	1631	1631		32.812	6.0163	1	33378			105	13497	90	90	109	109					-0.12321368941115907
AAQEADCSN	9	Unmodified	_AAQEADCSN_					0	0	0		ENST00000540458.5_1_12:6950163-6950600:+|nuORF;ENST00000542868.1_1_12:6950213-6950600:+|nuORF	ENST00000540458.5_1_12:6950163-6950600:+|nuORF	ENST00000540458.5_1_12:6950163-6950600:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	454.674356	907.33416	-0.29047	-0.00013207	-1.3651	-0.00062069	-1.6556	-0.00075276	454.673405111101	30.692	0.4887	30.645	30.422	30.911	-0.047062	-0.020124	0.00061221	NaN	32.812	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22993			106	13497	90	90							-0.12321368941115907
AAQKSRGVRVN	11	Unmodified	_AAQKSRGVRVN_					0	0	0			REV__ENSG00000083642|ENST00000315596|PDS5B	REV__ENSG00000083642|ENST00000315596|PDS5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.3441772460938	2	593.344178	1184.6738	-0.64573	-0.00038314	1.086	0.00064436	0.44025	0.00026122	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.74763	1	11272	11272		22.58	1.6327	1	2296600	+		107	16858	91	91	110	110					0.08885231126032522
AARAFRAL	8	Unmodified	_AARAFRAL_					0	0	0			REV__ENSG00000230778|ENST00000434396|ANKRD63	REV__ENSG00000230778|ENST00000434396|ANKRD63	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26324462890625	2	438.264136	874.51372	-1.2142	-0.00053214	-0.86056	-0.00037715	-2.0748	-0.00090929	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.85277	1	3467	3467		25.45	4.9683	1	4828000	+		108	23758	92	92	111	111					0.07144347919643224
AARALRGP	8	Unmodified	_AARALRGP_					0	0	0		ENST00000352210.9_1_1:161136243-161136720:+|nuORF;ENST00000367999.8_1_1:161136243-161136698:+|nuORF	ENST00000352210.9_1_1:161136243-161136720:+|nuORF	ENST00000352210.9_1_1:161136243-161136720:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24847412109375	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.81548	1	10423	10423		20.482	1.1219	1	28266000			109	10324	93	93	112	112					0.06959774885558545
AARARAVP	8	Unmodified	_AARARAVP_					0	0	0			REV__nc|ENSG00000162981|Q96KN4-2|LRATD1	REV__nc|ENSG00000162981|Q96KN4-2|LRATD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2487487792969	2	406.248486	810.48242	-1.791	-0.00072759	2.2768	0.00092493	0.48577	0.00019734	406.2492919418848	111.27	0.62435	111.39	111.04	111.66	0.11118					49	21	3	0	0	0	0.82464	1	12002	12002		21.702	1.2205	1	128170	+		110	29979	94	94	113	113					0.06959774885558545
AARARPVA	8	Unmodified	_AARARPVA_					0	0	0			REV__ENSG00000143869|ENST00000272224|GDF7	REV__ENSG00000143869|ENST00000272224|GDF7	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.248779296875	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.36	1	115.33	114.83	115.83	-0.02433								0	0	0	0.30125	1	12776	12776		20.482	0	1		+		111	19850	95	95	114	114					0.06959774885558545
AARERALAS	9	Unmodified	_AARERALAS_					0	0	0		ENSG00000251322|ENST00000262795|SHANK3;nc|ENSG00000251322|Q9BYB0-3|SHANK3;ENST00000414786.6_1_22:51113069-51169737:+|nuORF;nc|ENSG00000251322|Q9BYB0|SHANK3	ENSG00000251322|ENST00000262795|SHANK3	ENSG00000251322|ENST00000262795|SHANK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.76715087890625	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.7932	1	8451	8451		25.574	2.5316	1	547170			112	8852	96	96	115	115					0.04590821360500286
AARGARPT	8	Unmodified	_AARGARPT_					0	0	0			REV__ENSG00000243509|ENST00000369996|TNFRSF6B	REV__ENSG00000243509|ENST00000369996|TNFRSF6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2283935546875	2	400.230294	798.446034	-0.7523	-0.00030109	-3.6803	-0.001473	-4.4326	-0.0017741	400.2288641883786	54.868	1.9417	54.819	53.946	55.888	-0.049274					98	61	2	0	0	0	0.80959	1	4559	4559		15.642	1.8665	1	1019300	+		113	23839	97	97	116	116					0.038748979888509893
AARGMGLRVP	10	Unmodified	_AARGMGLRVP_					0	0	0			REV__ENST00000557056.5_1_14:24800458-24802093:-|nuORF	REV__ENST00000557056.5_1_14:24800458-24802093:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.2982177734375	2	514.295111	1026.57567	2.4088	0.0012388	3.3351	0.0017152	5.7439	0.0029541	514.2969979769872	96.495	1.923	96.438	95.348	97.271	-0.056389					101	44	3	0	0	0	0.6116	1	10376	10376		49.442	8.6634	1	635860	+		114	28671	98	98	117	117					0.06344331276477533
AARGMGLRVP	10	Unmodified	_AARGMGLRVP_					0	0	0			REV__ENST00000557056.5_1_14:24800458-24802093:-|nuORF	REV__ENST00000557056.5_1_14:24800458-24802093:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	514.295111	1026.57567	1.7005	0.00087455	4.2488	0.0021851	5.9493	0.0030597	514.2973799295468	96.149	2.8762	96.57	95.624	98.5	0.42051	0.0077988	-0.00089176	NaN	49.442	114	69	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	549770	+		115	28671	98	98							0.06344331276477533
AARGMGLRVP	10	Unmodified	_AARGMGLRVP_					0	0	0			REV__ENST00000557056.5_1_14:24800458-24802093:-|nuORF	REV__ENST00000557056.5_1_14:24800458-24802093:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	514.295111	1026.57567	0.92633	0.00047641	4.7837	0.0024602	5.7101	0.0029367	514.2977155903418	96.21	1.7219	96.615	95.533	97.255	0.40451	0.05294	-0.00034155	NaN	49.442	87	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	535920	+		116	28671	98	98							0.06344331276477533
AARGVKPGN	9	Unmodified	_AARGVKPGN_					0	0	0			REV__ENST00000452802.5_1_3:8540357-8543323:-|nuORF	REV__ENST00000452802.5_1_3:8540357-8543323:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2514343261719	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.7932	1	7718	7718		21.96	1.4781	1	3292300	+		117	26903	99	99	118	118					0.04839453677379879
AARHGITN	8	Unmodified	_AARHGITN_					0	0	0			REV__ENST00000563447.1_1_16:2293017-2294430:-|nuORF	REV__ENST00000563447.1_1_16:2293017-2294430:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.22772216796875	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.9283	1	7801	7801		49.442	7.0454	1	888480	+		118	21440	100	100	119	119					0.015265941262100569
AARLARFA	8	Unmodified	_AARLARFA_					0	0	0			REV__nc|ENSG00000167925|Q8N2G8-3|GHDC	REV__nc|ENSG00000167925|Q8N2G8-3|GHDC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26348876953125	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.81548	1	2849	2849		20.482	0	1	22924000	+		119	21438	101	101	120	120					0.07144347919643224
AARLGQLH	8	Unmodified	_AARLGQLH_					0	0	0			REV__nc|ENSG00000149823|Q9UID3-2|VPS51	REV__nc|ENSG00000149823|Q9UID3-2|VPS51	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.2554626464844	2	433.253769	864.492984	-1.5591	-0.00067547	3.4633	0.0015005	1.9042	0.000825	433.25608106819277	107.03	1.2892	107.16	106.64	107.93	0.13866					139	31	6	0	0	0	0.91005	1	11502	11502		42.474	5.446	1	127480000	+		120	20195	102	102	121	121					0.05531757539984028
AARLIKLL	8	Unmodified	_AARLIKLL_					0	0	0		nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;ENSG00000141837|ENST00000360228|CACNA1A;ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000198216|Q15878-2|CACNA1E;nc|ENSG00000198216|Q15878-3|CACNA1E;ENSG00000198216|ENST00000367573|CACNA1E;nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000141837|O00555-5|CACNA1A;ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000198216|Q15878-2|CACNA1E;nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.314208984375	2	449.315838	896.617122	0.060144	2.7024E-05	-2.6688	-0.0011991	-2.6086	-0.0011721	449.3144620861982	21.476	1.5551	21.033	20.161	21.716	-0.44324					87	36	3	0	0	0	0.81548	3	807	739;775;807		28.254	11.011	1	594410			121	14984;4960;4530;8256	103	103	122;123;124	124					0.16467835307469159
AARLIKLL	8	Unmodified	_AARLIKLL_					0	0	0		nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;ENSG00000141837|ENST00000360228|CACNA1A;ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000198216|Q15878-2|CACNA1E;nc|ENSG00000198216|Q15878-3|CACNA1E;ENSG00000198216|ENST00000367573|CACNA1E;nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000141837|O00555-5|CACNA1A;ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000198216|Q15878-2|CACNA1E;nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.314208984375	2	449.315838	896.617122	0.030616	1.3756E-05	-2.674	-0.0012015	-2.6434	-0.0011877	449.3144775449266	21.709	1.5646	21.081	20.162	21.727	-0.62835					91	40	3	0	0	0	0.81548	2	773	773;835		21.702	4.8456	1	615330			122	14984;4960;4530;8256	103	103	125;126	125					0.16467835307469159
AARLVCGYP	9	Unmodified	_AARLVCGYP_					0	0	0			REV__ENSG00000125726|ENST00000245903|CD70	REV__ENSG00000125726|ENST00000245903|CD70	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	475.2519836425781	2	475.249837	948.485122	-0.30594	-0.0001454	4.2816	0.0020348	3.9756	0.0018894	475.2517597895857	20.234	0.54551	20.164	19.955	20.501	-0.069733					38	21	3	0	0	0	0.76402	1	520	520		35.201	1.0282	1	125520	+		123	18660	104	104	127	127					0.008818622281978605
AARLVRSGT	9	Unmodified	_AARLVRSGT_					0	0	0			REV__ENST00000367311.4_1_1:201437913-201438192:-|nuORF	REV__ENST00000367311.4_1_1:201437913-201438192:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7778015136719	2	465.777608	929.540663	-0.11871	-5.5291E-05	0.041983	1.9555E-05	-0.076723	-3.5736E-05	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.7932	1	7930	7930		21.96	1.4781	1	1083800	+		124	25562	105	105	128	128					0.07307411740191583
AARMAALVE	9	Unmodified	_AARMAALVE_					0	0	0		nc|ENSG00000178104|Q5VU43-6|PDE4DIP;nc|ENSG00000178104|Q5VU43-7|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;ENSG00000178104|ENST00000695795|PDE4DIP;ENST00000477941.2_1_1:144952199-144955307:-|nuORF;nc|ENSG00000178104|Q5VU43-11|PDE4DIP;nc|ENSG00000178104|Q5VU43-10|PDE4DIP;nc|ENSG00000178104|Q5VU43-12|PDE4DIP;nc|ENSG00000178104|Q5VU43-8|PDE4DIP;nc|ENSG00000178104|Q5VU43-9|PDE4DIP	nc|ENSG00000178104|Q5VU43-6|PDE4DIP	nc|ENSG00000178104|Q5VU43-6|PDE4DIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2535400390625	2	466.25512	930.495686	-1.4677	-0.00068433	-1.5144	-0.00070609	-2.9821	-0.0013904	466.2543190866504	60.961	1.1333	60.992	59.95	61.083	0.0312					73	35	3	0	0	0	0.77244	1	5632	5632		32.812	2.3088	1	265390			125	7183	106	106	129	129					0.0276584488261733
AARMAALVE	9	Unmodified	_AARMAALVE_					0	0	0		nc|ENSG00000178104|Q5VU43-6|PDE4DIP;nc|ENSG00000178104|Q5VU43-7|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;ENSG00000178104|ENST00000695795|PDE4DIP;ENST00000477941.2_1_1:144952199-144955307:-|nuORF;nc|ENSG00000178104|Q5VU43-11|PDE4DIP;nc|ENSG00000178104|Q5VU43-10|PDE4DIP;nc|ENSG00000178104|Q5VU43-12|PDE4DIP;nc|ENSG00000178104|Q5VU43-8|PDE4DIP;nc|ENSG00000178104|Q5VU43-9|PDE4DIP	nc|ENSG00000178104|Q5VU43-6|PDE4DIP	nc|ENSG00000178104|Q5VU43-6|PDE4DIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2544250488281	2	466.25512	930.495686	-1.0626	-0.00049542	-1.5643	-0.00072936	-2.6268	-0.0012248	466.25428484711466	65.434	1.0083	65.561	64.638	65.647	0.12701					53	39	2	0	0	0	0.78536	1	5786	5786		29.15	0	1	261630			126	7183	106	106	130	130					0.0276584488261733
AARNLQPN	8	Unmodified	_AARNLQPN_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2405700683594	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.87922	1	7973	7973		31.955	4.0726	1	1094000			127	5717	107	107	131	131					0.021228632976999506
AARPTVPAP	9	Unmodified	_AARPTVPAP_					0	0	0			REV__ENST00000371712.3_1_9:139333425-139334268:-|nuORF	REV__ENST00000371712.3_1_9:139333425-139334268:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.25555419921875	2	440.255977	878.497401	-0.82974	-0.0003653	-0.76393	-0.00033632	-1.5937	-0.00070162	440.2556367977485	60.313	1.0519	60.313	60.031	61.083	0.00051117					60	36	3	0	0	0	0.76255	2	5271	5252;5271		35.618	5.3006	1	290170	+		128	25695	108	108	132;133	133					0.05329221962892916
AARWLRLRLG	10	Unmodified	_AARWLRLRLG_					0	0	0		ENST00000404924.5_1_2:24150417-24181201:+|nuORF;chr2:23939676-23958301|52|10.15|0.57|4.15|+|2|TE_info:MER92B,MER92B_dup60,ERV1,LTR,donor,-,23939242,23939676|None,UBXN2A|3	ENST00000404924.5_1_2:24150417-24181201:+|nuORF	ENST00000404924.5_1_2:24150417-24181201:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.92132568359375	3	404.587641	1210.74109	0.18961	7.6715E-05	2.8303	0.0011451	3.0199	0.0012218	404.5886662890934	41.346	1.1707	41.315	40.657	41.828	-0.030991					72	31	3	0	0	0	0.86621	1	2982	2982		26.063	2.6855	1	279590			129	329	109	109	134	134					0.14415306127625627
AARWLVRPKEK	11	Unmodified	_AARWLVRPKEK_					0	0	0		ENSG00000121039|ENST00000240285|RDH10	ENSG00000121039|ENST00000240285|RDH10	ENSG00000121039|ENST00000240285|RDH10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.9429931640625	3	451.941973	1352.80409	0.93902	0.00042438	1.7195	0.0007771	2.6585	0.0012015	451.94264736171164	50.689	2.054	51.44	50.261	52.315	0.75174					139	49	4	0	0	0	0.77205	1	5027	5027		17.167	2.3879	1	756920			130	3161	110	110	135	135					0.14179827124985422
AASFTSEE	8	Unmodified	_AASFTSEE_					0	0	0			REV__nc|ENSG00000110079|Q96JQ5-2|MS4A4A	REV__nc|ENSG00000110079|Q96JQ5-2|MS4A4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.18145751953125	2	421.18234	840.350128	1.2875	0.00054229	-4.2586	-0.0017936	-2.9711	-0.0012514	421.1804062619159	89.396	0.50162	89.847	89.611	90.113	0.45058					23	11	3	0	0	0	0.85277	1	10556	10556		25.45	1.2474	1	777600	+		131	17794	111	111	136	136					-0.07643339432570428
AASGKRVSKA	10	Unmodified	_AASGKRVSKA_					0	0	0		nc|ENSG00000132874|Q15849-2|SLC14A2;ENSG00000132874|ENST00000255226|SLC14A2	nc|ENSG00000132874|Q15849-2|SLC14A2	nc|ENSG00000132874|Q15849-2|SLC14A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7906494140625	2	487.790715	973.566878	-1.0855	-0.00052952	0.66797	0.00032583	-0.41757	-0.00020369	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.86621	1	7583	7583		26.063	0.9374	1	309700			132	3837	112	112	137	137					0.07903680911658739
AASNKGLR	8	Unmodified	_AASNKGLR_					0	0	0		nc|ENSG00000100722|Q6PJT7-9|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;ENST00000554020.5_1_14:89068416-89075752:+|nuORF	nc|ENSG00000100722|Q6PJT7-9|ZC3H14	nc|ENSG00000100722|Q6PJT7-9|ZC3H14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.7397766113281	2	408.737951	815.46135	0.85094	0.00034781	3.3352	0.0013632	4.1861	0.001711	408.7393373651895	37.561	2.1469	37.572	37.24	39.387	0.011173					113	49	4	0	0	0	0.85277	1	2546	2546		25.45	1.2474	1	272800			133	1862	113	113	138	138					0.04623764786049378
AASNKGLR	8	Unmodified	_AASNKGLR_					0	0	0		nc|ENSG00000100722|Q6PJT7-9|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;ENST00000554020.5_1_14:89068416-89075752:+|nuORF	nc|ENSG00000100722|Q6PJT7-9|ZC3H14	nc|ENSG00000100722|Q6PJT7-9|ZC3H14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7394104003906	2	408.737951	815.46135	0.14715	6.0146E-05	4.0233	0.0016445	4.1704	0.0017046	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.7961	1	2063	2063		17.365	1.7232	1	1448600			134	1862	113	113	139	139					0.04623764786049378
AASRGKPR	8	Unmodified	_AASRGKPR_					0	0	0		ENST00000564834.1_1_7:152161422-152161626:+|nuORF	ENST00000564834.1_1_7:152161422-152161626:+|nuORF	ENST00000564834.1_1_7:152161422-152161626:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75152587890625	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.80308	1	7561	7561		16.473	0.83693	1	532850			135	13895	114	114	140	140					0.06114873397223164
AASSFVCH	8	Unmodified	_AASSFVCH_					0	0	0			REV__ENST00000562882.5_1_16:65087800-65105956:-|nuORF	REV__ENST00000562882.5_1_16:65087800-65105956:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.1859436035156	2	411.184163	820.353773	2.6341	0.0010831	2.3612	0.0009709	4.9953	0.002054	411.18505067762544	104.06	1.4942	104.25	103.81	105.3	0.18887					65	37	2	0	0	0	0.86791	1	12665	12665		28.254	1.4582	1	862490	+		136	15636	115	115	141	141					-0.0635894813970026
AASVISAPP	9	Unmodified	_AASVISAPP_					0	0	0		ENSG00000146834|ENST00000310512|MEPCE	ENSG00000146834|ENST00000310512|MEPCE	ENSG00000146834|ENST00000310512|MEPCE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7296447753906	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.7932	1	7542	7542		24.203	3.7209	1	159770			137	4862	116	116	142	142					0.030704244603612096
AATSAKKVV	9	Unmodified	_AATSAKKVV_					0	0	0		ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF	ENSG00000115053|ENST00000322723|NCL	ENSG00000115053|ENST00000322723|NCL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7712707519531	2	437.77146	873.528367	-0.63876	-0.00027963	0.070293	3.0772E-05	-0.56847	-0.00024886	437.77162175664915	38.677	1.0193	39.199	38.87	39.89	0.52235					96	23	6	0	0	0	0.7932	1	3277	3277		19.104	1.7386	1	19739000			138	2809	117	117	143	143					0.0865437527713766
AAVEAKRVN	9	Unmodified	_AAVEAKRVN_					0	0	0			REV__nc|ENSG00000147573|Q9BYV6-3|TRIM55	REV__nc|ENSG00000147573|Q9BYV6-3|TRIM55	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2782897949219	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.78058	1	8314	8314		30.504	0.18592	1	6441000	+		139	20076	118	118	144	144					0.060319920203255606
AAVIGKSQQLQ	11	Unmodified	_AAVIGKSQQLQ_					0	0	0			REV__ENST00000373551.4_1_9:127662694-127674188:-|nuORF	REV__ENST00000373551.4_1_9:127662694-127674188:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.83251953125	2	571.830037	1141.64552	0.52232	0.00029868	3.2814	0.0018764	3.8038	0.0021751	571.8317305626368	76.468	0.71038	76.593	76.218	76.929	0.12486					65	24	4	0	0	0	0.41466	1	7128	7128		58.23	1.5089	1	605570	+		140	19350	119	119	145	145					0.08036488426091637
AAVKAVGVP	9	Unmodified	_AAVKAVGVP_					0	0	0		ENST00000503498.1_1_3:129133914-129140362:-|nuORF;ENST00000514900.5_1_3:129122974-129137267:-|nuORF;ENSG00000172771|ENST00000505956|EFCAB12	ENST00000503498.1_1_3:129133914-129140362:-|nuORF	ENST00000503498.1_1_3:129133914-129140362:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2566223144531	2	406.255446	810.496338	0.4356	0.00017696	3.2885	0.001336	3.7241	0.001513	406.2566834983236	67.315	1.2036	67.443	67.189	68.392	0.12748					81	45	2	0	0	0	0.7932	1	6097	6097		18.324	3.6603	1	112860			141	6792	120	120	146	146					0.08351007593989834
AAVLKHIE	8	Unmodified	_AAVLKHIE_					0	0	0		nc|ENSG00000160695|Q9H270|VPS11;ENSG00000160695|ENST00000621676|VPS11	nc|ENSG00000160695|Q9H270|VPS11	nc|ENSG00000160695|Q9H270|VPS11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.767822265625	2	440.766178	879.517802	0.40229	0.00017731	0.077187	3.4022E-05	0.47947	0.00021134	440.7660677899125	18.295	0.85853	17.674	17.21	18.069	-0.62141					39	19	3	0	0	0	0.86288	1	349	349		26.796	0	1	167020			142	5598	121	121	147	147					0.07322392622700136
AAVRKFTS	8	Unmodified	_AAVRKFTS_					0	0	0		nc|ENSG00000116906|O15228-2|GNPAT;ENSG00000116906|ENST00000366647|GNPAT	nc|ENSG00000116906|O15228-2|GNPAT	nc|ENSG00000116906|O15228-2|GNPAT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2552185058594	2	440.255977	878.497401	0.40701	0.00017919	-1.6183	-0.00071247	-1.2113	-0.00053328	440.25507557275375	63.556	1.6285	64.111	63.598	65.226	0.55449					91	38	4	0	0	0	0.81548	1	6892	6892		20.482	1.1219	1	1465000			143	2955	122	122	148	148					0.05329221962904285
AAVSLSVSH	9	Unmodified	_AAVSLSVSH_					0	0	0			REV__nc|ENSG00000214787|Q96PG1-3|MS4A4E	REV__nc|ENSG00000214787|Q96PG1-3|MS4A4E	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7800598144531	2	435.737617	869.460681	0.1362	5.9348E-05	-0.22251	-9.6955E-05	-0.086306	-3.7607E-05	435.73731189004883	40.027	0.68912	39.996	39.65	40.339	-0.030991					47	16	4	0	0	0	0.20752	1	2807	2807		35.618	11.416	1	495400	+		144	23664	123	123	149	149					0.020729253463287023
AAVVRLLK	8	Unmodified	_AAVVRLLK_					0	0	0		nc|ENSG00000262085|Q8NH06|OR1P1	nc|ENSG00000262085|Q8NH06|OR1P1	nc|ENSG00000262085|Q8NH06|OR1P1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3001708984375	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.82419	1	6947	6947		13.775	0	1	1680500			145	15306	124	124	150	150					0.14627262273370434
AAVVSLKK	8	Unmodified	_AAVVSLKK_					0	0	0			REV__ENST00000536939.1_1_11:63706535-63720038:+|nuORF	REV__ENST00000536939.1_1_11:63706535-63720038:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.27117919921875	2	408.271096	814.527639	0.55277	0.00022568	-0.26667	-0.00010887	0.2861	0.00011681	408.27086164500804	29.128	0.98776	28.955	28.547	29.535	-0.17336					46	22	3	0	0	0	0.38743	1	1821	1821		92.191	9.8856	1	1086600	+		146	25221	125	125	151	151					0.11295580628075186
AAVWKGGK	8	Unmodified	_AAVWKGGK_					0	0	0		ENST00000477976.5_1_1:891308-891350:-|nuORF;ENST00000407594.2_1_2:132201573-132201807:-|nuORF	ENST00000477976.5_1_1:891308-891350:-|nuORF	ENST00000477976.5_1_1:891308-891350:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.7394104003906	2	408.739963	815.465373	-0.047648	-1.9476E-05	-0.50077	-0.00020468	-0.54842	-0.00022416	408.73963408946304	36.955	2.5653	36.931	36.681	39.246	-0.023975					119	58	3	0	0	0	0.86288	1	2447	2447		26.796	2.5934	1	457600			147	11289	126	126	152	152					0.05025854279756459
AAWVIWGK	8	Unmodified	_AAWVIWGK_					0	0	0			REV__nc|ENSG00000152520|Q58A45-2|PAN3	REV__nc|ENSG00000152520|Q58A45-2|PAN3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7909240722656	2	465.763438	929.512323	-1.1265	-0.00052469	-2.235	-0.001041	-3.3615	-0.0015657	465.76201625221154	34.485	0.68208	34.524	34.109	34.791	0.038643					44	28	2	0	0	0	0.4196	1	1742	1742		65.897	43.938	1	85777	+		148	29934	127	127	153	153					0.044747138308935064
AAYVRKTA	8	Unmodified	_AAYVRKTA_					0	0	0		nc|ENSG00000188343|A1XBS5-5|CIBAR1;ENST00000523577.5_1_8:94712794-94713716:+|nuORF;nc|ENSG00000188343|A1XBS5-2|CIBAR1;nc|ENSG00000188343|A1XBS5-4|CIBAR1;nc|ENSG00000188343|A1XBS5-3|CIBAR1;ENSG00000188343|ENST00000518322|CIBAR1	nc|ENSG00000188343|A1XBS5-5|CIBAR1	nc|ENSG00000188343|A1XBS5-5|CIBAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2549743652344	2	440.255977	878.497401	0.43383	0.000191	-1.7245	-0.00075924	-1.2907	-0.00056825	440.2551344280369	66.668	0.61041	66.795	66.527	67.137	0.12649					60	27	3	0	0	0	0.85277	1	5935	5935		25.45	0.94616	1	272000			149	7924	128	128	154	154					0.05329221962892916
ACAAAAHHVGP	11	Unmodified	_ACAAAAHHVGP_					0	0	0			REV__ENST00000274811.8_1_5:175957954-175958518:-|nuORF	REV__ENST00000274811.8_1_5:175957954-175958518:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.2658386230469	2	502.740168	1003.46578	-0.68781	-0.00034579	0.81419	0.00040933	0.12638	6.3539E-05	502.7404586734024	81.853	0.78804	82.279	82.002	82.79	0.42645					37	19	3	0	0	0	0.17566	1	9500	9500		40.573	17.53	1	482230	+		150	24567	129	129	155	155					-0.03581094062701595
ACCTGAGCQ	9	Unmodified	_ACCTGAGCQ_					0	0	0			REV__ENSG00000143125|ENST00000271331|PROK1	REV__ENSG00000143125|ENST00000271331|PROK1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.74981689453125	2	407.138041	812.261529	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.42	1	119.45	118.95	119.95	0.026466								0	0	0	0.34024	1	13142	13142		17.365	1.7287	1		+		151	19770	130	130	156	156					-0.1521111753988862
ACCVPVPSCC	10	Unmodified	_ACCVPVPSCC_					0	0	0		ENSG00000187766|ENST00000334662|KRTAP10-8;ENSG00000272804|ENST00000609664|KRTAP10-7;ENSG00000215454|ENST00000400374|KRTAP10-4	ENSG00000187766|ENST00000334662|KRTAP10-8	ENSG00000187766|ENST00000334662|KRTAP10-8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.1867370605469	2	491.186677	980.3588	0.55334	0.00027179	-3.1452	-0.0015449	-2.5918	-0.0012731	491.18514969245695	73.95	0.81865	74.081	73.85	74.669	0.13126					71	31	3	0	0	0	0.84112	1	6832	6832		37.159	4.3467	1	196840			152	7879	131	131	157	157					-0.1321647165525519
ACERSCPPVA	10	Unmodified	_ACERSCPPVA_					0	0	0		ENSG00000147119|ENST00000276055|CHST7	ENSG00000147119|ENST00000276055|CHST7	ENSG00000147119|ENST00000276055|CHST7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7337646484375	2	516.733694	1031.45284	0.31674	0.00016367	0.76854	0.00039713	1.0853	0.0005608	516.7340497824208	43.621	0.57462	43.594	43.273	43.848	-0.026764					24	13	2	0	0	0	0.80179	1	3347	3347		39.253	2.2244	1	190390			153	4882	132	132	158	158					-0.06163293237113976
ACGLKVLGL	9	Unmodified	_ACGLKVLGL_					0	0	0			REV__nc|ENSG00000140284|O14975-2|SLC27A2	REV__nc|ENSG00000140284|O14975-2|SLC27A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2655029296875	2	437.264956	872.515359	-2.1366	-0.00093428	3.8525	0.0016846	1.7158	0.00075028	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.74721	1	661	661		37.159	5.2042	1	999210	+		154	29887	133	133	159	159					0.07400220893384812
ACKRPPSPTLQ	11	Unmodified	_ACKRPPSPTLQ_					0	0	0		ENSG00000196169|ENST00000389916|KIF19	ENSG00000196169|ENST00000389916|KIF19	ENSG00000196169|ENST00000389916|KIF19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.321044921875	2	599.324065	1196.63358	-0.28402	-0.00017022	-2.4118	-0.0014455	-2.6959	-0.0016157	599.3225591743176	59.55	0.7013	59.55	59.295	59.997	0.00051117					51	21	3	0	0	0	0.45992	1	5132	5132		54.722	1.3709	1	234150			155	8021	134	134	160	160					0.043125484112579215
ACPAAAPLPS	10	Unmodified	_ACPAAAPLPS_					0	0	0			REV__ENST00000264377.7_1_2:207308340-207308538:+|nuORF	REV__ENST00000264377.7_1_2:207308340-207308538:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2324523925781	2	449.228571	896.442588	0.61452	0.00027606	3.8652	0.0017363	4.4797	0.0020124	449.2302672922752	83.471	4.8977	83.402	80.905	85.803	-0.069313					227	113	3	0	0	0	0.84112	1	8588	8588		37.159	5.2042	1	260170	+		156	24470	135	135	161	161					-0.009775329000376587
ACPAAAPLPS	10	Unmodified	_ACPAAAPLPS_					0	0	0			REV__ENST00000264377.7_1_2:207308340-207308538:+|nuORF	REV__ENST00000264377.7_1_2:207308340-207308538:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.23187255859375	2	449.228571	896.442588	0.96561	0.00043378	3.5308	0.0015861	4.4964	0.0020199	449.2301030462438	83.133	5.5992	83.192	80.121	85.72	0.059158					204	132	2	0	0	0	0.86305	1	8401	8401		31.955	5.1588	1	221730	+		157	24470	135	135	162	162					-0.009775329000376587
ACPGPGGG	8	Unmodified	_ACPGPGGG_					0	0	0		ENST00000504087.5_1_4:125632412-125633877:-|nuORF;ENST00000515641.1_1_4:125600034-125633877:-|nuORF	ENST00000504087.5_1_4:125632412-125633877:-|nuORF	ENST00000504087.5_1_4:125632412-125633877:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	614.3326416015625	1	615.255522	614.248246	-0.36266	-0.00022313	-2.3924	-0.0014719	-2.755	-0.0016951	615.2539792302223	70.917	1.2346	70.951	70.484	71.718	0.033997					93	59	2	0	0	0	0.4196	1	6692	6692		16.705	6.5202	1	125380			158	12898	136	136	163	163					-0.0743086426531363
ACPGPGGG	8	Unmodified	_ACPGPGGG_					0	0	0		ENST00000504087.5_1_4:125632412-125633877:-|nuORF;ENST00000515641.1_1_4:125600034-125633877:-|nuORF	ENST00000504087.5_1_4:125632412-125633877:-|nuORF	ENST00000504087.5_1_4:125632412-125633877:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		1	615.255522	614.248246	-0.57819	-0.00035574	0.59412	0.00036553	0.015928	9.7996E-06	615.2540675924156	70.941	1.0162	70.941	70.569	71.585	0	-0.10056	0.0019715	NaN	16.705	98	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	218510			159	12898	136	136							-0.0743086426531363
ACPGPGGG	8	Unmodified	_ACPGPGGG_					0	0	0		ENST00000504087.5_1_4:125632412-125633877:-|nuORF;ENST00000515641.1_1_4:125600034-125633877:-|nuORF	ENST00000504087.5_1_4:125632412-125633877:-|nuORF	ENST00000504087.5_1_4:125632412-125633877:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		1	615.255522	614.248246	-0.76729	-0.00047208	-1.5838	-0.00097442	-2.3511	-0.0014465	615.2543893890295	70.915	1.0168	70.953	70.635	71.652	0.038055	-0.088879	0.00063159	NaN	16.705	69	52	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142790			160	12898	136	136							-0.0743086426531363
ACPGPGGG	8	Unmodified	_ACPGPGGG_					0	0	0		ENST00000504087.5_1_4:125632412-125633877:-|nuORF;ENST00000515641.1_1_4:125600034-125633877:-|nuORF	ENST00000504087.5_1_4:125632412-125633877:-|nuORF	ENST00000504087.5_1_4:125632412-125633877:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		1	615.255522	614.248246	1.1532	0.00070952	-3.727	-0.0022931	-2.5738	-0.0015835	615.2530455107826	71.096	1.0452	71.229	70.664	71.709	0.13356	0.18735	-0.00068706	NaN	16.705	75	48	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124810			161	12898	136	136							-0.0743086426531363
ACPGPGGG	8	Unmodified	_ACPGPGGG_					0	0	0		ENST00000504087.5_1_4:125632412-125633877:-|nuORF;ENST00000515641.1_1_4:125600034-125633877:-|nuORF	ENST00000504087.5_1_4:125632412-125633877:-|nuORF	ENST00000504087.5_1_4:125632412-125633877:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		1	615.255522	614.248246	0.647	0.00039807	-3.4943	-0.0021499	-2.8473	-0.0017518	615.2533722366763	71.057	0.99238	71.187	70.669	71.661	0.12965	0.14456	-0.00054386	NaN	16.705	73	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136530			162	12898	136	136							-0.0743086426531363
ACPQGRCH	8	Unmodified	_ACPQGRCH_					0	0	0			REV__ENST00000414734.5_1_3:50327100-50328031:-|nuORF	REV__ENST00000414734.5_1_3:50327100-50328031:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.1870422363281	2	436.186714	870.358875	2.4896	0.0010859	-3.5595	-0.0015526	-1.0699	-0.00046669	436.18528994796645	100.53	0.76816	100.87	100.57	101.34	0.3459					37	18	3	0	0	0	0.86791	1	12214	12214		28.254	5.2118	1	402580	+		163	26411	137	137	164	164					-0.08148967548743258
ACSGPKDGPH	10	Unmodified	_ACSGPKDGPH_					0	0	0		ENSG00000149451|ENST00000356518|ADAM33;nc|ENSG00000149451|Q9BZ11-2|ADAM33;nc|ENSG00000149451|Q9BZ11-3|ADAM33	ENSG00000149451|ENST00000356518|ADAM33	ENSG00000149451|ENST00000356518|ADAM33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7181701660156	2	484.716359	967.418164	1.8339	0.00088894	1.6352	0.00079259	3.4691	0.0016815	484.717227769282	100.08	1.4855	100.42	100.11	101.59	0.3459					119	38	5	0	0	0	0.71042	1	12224	12224		44.117	1.6423	1	10268000			164	5026	138	138	165	165					-0.06684793053557314
ACSIQAKIVAL	11	Unmodified	_ACSIQAKIVAL_					0	0	0			REV__ENSG00000063322|ENST00000315588|MED29	REV__ENSG00000063322|ENST00000315588|MED29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8275146484375	2	558.825909	1115.63727	-0.1486	-8.3042E-05	3.17	0.0017715	3.0214	0.0016884	558.8274959479605	65.531	0.78168	65.558	65.246	66.027	0.027321					103	42	3	0	0	0	0.65746	1	6204	6204		37.812	0.30334	1	6703400	+		165	16471	139	139	166	166					0.08407218185107013
ACWYWGWF	8	Unmodified	_ACWYWGWF_					0	0	0		ENST00000512411.5_1_4:8368690-8375449:-|nuORF	ENST00000512411.5_1_4:8368690-8375449:-|nuORF	ENST00000512411.5_1_4:8368690-8375449:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3406982421875	2	559.73128	1117.44801	2.9492	0.0016508	-4.2094	-0.0023561	-1.2602	-0.00070539	559.7285927430277	102.45	0.29858	102.75	102.56	102.85	0.29865					12	6	2	0	0	0	0.4196	1	12467	12467		33.493	15.231	1	155320			166	13037	140	140	167	167					-0.10601809317563493
ACYVLSKLE	9	Unmodified	_ACYVLSKLE_					0	0	0		nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2;ENSG00000160796|ENST00000450053|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2808227539062	2	513.270435	1024.52632	-0.88602	-0.00045477	-0.86815	-0.0004456	-1.7542	-0.00090036	513.2700136177672	86.724	1.6885	86.724	85.994	87.683	0					55	38	2	0	0	0	0.20789	1	8349	8349		29.15	4.9468	1	48546			167	5607	141	141	168	168					0.015035784770134342
ADALGRQPLQ	10	Unmodified	_ADALGRQPLQ_					0	0	0		ENST00000564629.1_1_16:31469100-31469376:-|nuORF	ENST00000564629.1_1_16:31469100-31469376:-|nuORF	ENST00000564629.1_1_16:31469100-31469376:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.794921875	2	534.793455	1067.57236	0.59521	0.00031832	2.9867	0.0015973	3.5819	0.0019156	534.7950640393225	57.999	0.80846	57.969	57.623	58.432	-0.029865					44	20	3	0	0	0	0.60985	1	5392	5392		49.536	10.283	1	254230			168	13888	142	142	169	169					0.04127359703466027
ADAVVENHGAN	11	Unmodified	_ADAVVENHGAN_					0	0	0			REV__ENSG00000176387|ENST00000326152|HSD11B2	REV__ENSG00000176387|ENST00000326152|HSD11B2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.7564086914062	2	548.754527	1095.4945	-0.41385	-0.0002271	4.2561	0.0023356	3.8423	0.0021085	548.7566932590022	51.535	0.68855	51.533	51.307	51.996	-0.0020447					24	15	2	0	0	0	0.53361	1	4413	4413		49.536	1.8787	1	121930	+		169	22123	143	143	170	170					-0.04942697952560593
ADDDKLNEL	9	Unmodified	_ADDDKLNEL_					0	0	0			REV__ENSG00000214700|ENST00000429849|C12orf71	REV__ENSG00000214700|ENST00000429849|C12orf71	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7474365234375	2	516.745836	1031.47712	-0.049244	-2.5447E-05	3.2807	0.0016953	3.2315	0.0016699	516.747458427901	65.403	0.59649	65.407	65.023	65.62	0.0046997					55	25	3	0	0	0	0.76255	1	6159	6159		35.618	5.1146	1	327470	+		170	23659	144	144	171	171					-0.03736038278225351
ADDERSELI	9	Unmodified	_ADDERSELI_					0	0	0		ENSG00000107863|ENST00000396432|ARHGAP21;ENST00000486374.5_1_10:24873343-24884978:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21	ENSG00000107863|ENST00000396432|ARHGAP21	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.277099609375	2	524.251286	1046.48802	2.7391	0.001436	4.4459	0.0023308	7.1851	0.0037668	524.2536842883194	25.824	0.29846	25.393	25.312	25.611	-0.4311					9	6	2	0	0	0	0.20789	1	1400	1400		71.296	16.519	1	37388			171	2376	145	145	172	172					-0.03336635903929164
ADEHLAQTK	9	Unmodified	_ADEHLAQTK_					0	0	0		ENSG00000187690|ENST00000342995|EZHIP	ENSG00000187690|ENST00000342995|EZHIP	ENSG00000187690|ENST00000342995|EZHIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.75701904296875	2	506.756538	1011.49852	-0.13539	-6.861E-05	0.36268	0.00018379	0.22729	0.00011518	506.7564845685622	23.172	0.53206	23.122	22.905	23.437	-0.050077					41	19	3	0	0	0	0.44421	1	760	760		54.776	7.119	1	75641			172	7871	146	146	173	173					-0.006766084588434751
ADEHLAQTK	9	Unmodified	_ADEHLAQTK_					0	0	0		ENSG00000187690|ENST00000342995|EZHIP	ENSG00000187690|ENST00000342995|EZHIP	ENSG00000187690|ENST00000342995|EZHIP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	506.756538	1011.49852	-0.54038	-0.00027384	0.85094	0.00043122	0.31056	0.00015738	506.757315385042	23.145	0.63195	23.198	22.934	23.566	0.05291	0.0078424	0.00042129	NaN	54.776	38	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48332			173	7871	146	146							-0.006766084588434751
ADFLRSRRI	9	Unmodified	_ADFLRSRRI_					0	0	0		ENSG00000104888|ENST00000221485|SLC17A7;nc|ENSG00000104888|Q9P2U7-2|SLC17A7;nc|ENSG00000104888|Q9P2U7-3|SLC17A7	ENSG00000104888|ENST00000221485|SLC17A7	ENSG00000104888|ENST00000221485|SLC17A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3363037109375	2	567.330539	1132.64652	-1.3958	-0.00079187	0.45547	0.0002584	-0.94031	-0.00053347	567.3306768153905	113.32	5.91	113.27	113.24	119.15	-0.044777					245	138	3	0	0	0	0.7932	1	12535	12535		14.865	0.72775	1	1691900			174	2162	147	147	174	174					0.0855074758567298
ADGDLFDG	8	Unmodified	_ADGDLFDG_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.170166015625	2	405.169233	808.323913	-1.8321	-0.00074232	0.1457	5.9033E-05	-1.6864	-0.00068329	405.16930328242256	78.454	0.69857	78.581	78.154	78.852	0.12695					49	21	3	0	0	0	0.4196	1	7402	7402		16.473	0	1	687460	+		175	24025	148	148	175	175					-0.08791608604030898
ADGDQGFFRTY	11	Unmodified	_ADGDQGFFRTY_					0	0	0			REV__nc|ENSG00000070610|Q9HCG7-3|GBA2	REV__nc|ENSG00000070610|Q9HCG7-3|GBA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.19244384765625	3	426.191282	1275.55202	0.52668	0.00022447	2.2688	0.00096693	2.7955	0.0011914	426.19224724455324	18.248	0.59749	18.224	18.002	18.6	-0.024033					48	27	2	0	0	0	0.68431	1	298	298		34.087	8.1948	1	245110	+		176	16606	149	149	176	176					-0.07473855746980007
ADGDTLMIVI	10	Unmodified	_ADGDTLMIVI_					0	0	0			REV__nc|ENSG00000162267|Q06033-2|ITIH3	REV__nc|ENSG00000162267|Q06033-2|ITIH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2784423828125	2	524.273175	1046.5318	2.7827	0.0014589	4.2298	0.0022176	7.0125	0.0036765	524.2754281662812	25.682	3.5829	25.251	24.138	27.721	-0.4311					230	81	7	0	0	0	0.43769	1	1471	1471		60.972	4.2509	1	23207000	+		177	20801	150	150	177	177					0.01039257268826077
ADGGLTEDRLL	11	Unmodified	_ADGGLTEDRLL_					0	0	0			REV__nc|ENSG00000183260|Q9H3Z7|ABHD16B	REV__nc|ENSG00000183260|Q9H3Z7|ABHD16B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.3016967773438	2	580.30131	1158.58807	-0.047463	-2.7543E-05	0.33566	0.00019478	0.2882	0.00016724	580.3014620786945	49.57	0.81506	50.415	49.993	50.809	0.84501					45	19	3	0	0	0	0.50531	1	4868	4868		51.528	2.9262	1	2193500	+		178	30085	151	151	178	178					0.0151160142986555
ADGQAKDVSVE	11	Unmodified	_ADGQAKDVSVE_					0	0	0			REV__nc|ENSG00000136068|O75369-5|FLNB	REV__nc|ENSG00000136068|O75369-5|FLNB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.8237915039062	2	559.769842	1117.52513	0.25081	0.0001404	2.8312	0.0015848	3.082	0.0017252	559.7712975197788	81.563	0.68208	81.989	81.592	82.275	0.42645					29	16	2	0	0	0	0.17502	1	9411	9411		44.377	19.858	1	261840	+		179	19284	152	152	179	179					-0.028929643581932396
ADGRFKEEMLD	11	Unmodified	_ADGRFKEEMLD_					0	0	0			REV__chr1:159006041-159010003|17|12.94|0.64|4.34|+|ENST00000426592|IFI16,IFI16	REV__chr1:159006041-159010003|17|12.94|0.64|4.34|+|ENST00000426592|IFI16,IFI16	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2565612792969	3	437.539693	1309.59725	-1.14	-0.00049878	4.0831	0.0017865	2.9432	0.0012878	437.5412830156982	31.038	0.48578	31.118	30.811	31.297	0.079834					15	10	2	0	0	0	0.17331	1	2080	2080		18.966	7.5117	1	75919	+		180	15419	153	153	180	180					-0.04516373276123886
ADHGPQPLP	9	Unmodified	_ADHGPQPLP_					0	0	0		ENST00000397977.7_1_8:19675023-19675167:+|nuORF	ENST00000397977.7_1_8:19675023-19675167:+|nuORF	ENST00000397977.7_1_8:19675023-19675167:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.23284912109375	2	466.235242	930.45593	-0.37261	-0.00017372	3.7234	0.001736	3.3508	0.0015623	466.2368727848656	66.885	0.49561	67.435	67.196	67.691	0.55071					29	16	2	0	0	0	0.20789	1	7334	7334		25.574	0	1	313080			181	11168	154	154	181	181					-0.01207958796442199
ADHGRSSSEED	11	Unmodified	_ADHGRSSSEED_					0	0	0		nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4;ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-2|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	595.242919921875	2	595.239438	1188.46432	0.28265	0.00016824	4.2241	0.0025144	4.5068	0.0026826	595.2417580296138	64.699	0.62426	64.664	64.403	65.028	-0.03479					34	15	3	0	0	0	0.57736	1	6172	6172		46.457	5.0302	1	395320			182	8020	155	155	182	182					-0.12237101408413764
ADHGRSSSEED	11	Unmodified	_ADHGRSSSEED_					0	0	0		nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4;ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-2|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	595.2416381835938	2	595.239438	1188.46432	0.8453	0.00050316	4.0896	0.0024343	4.9349	0.0029375	595.2415956787161	64.558	0.56976	64.684	64.449	65.019	0.12545					37	17	3	0	0	0	0.6493	1	5696	5696		38.754	8.25	1	353160			183	8020	155	155	183	183					-0.12237101408413764
ADHHPMLSPQ	10	Oxidation (M)	_ADHHPM(Oxidation (M))LSPQ_		ADHHPM(1)LSPQ		ADHHPM(53)LSPQ	0	0	1			REV__ENSG00000083444|ENST00000196061|PLOD1	REV__ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.7613525390625	2	574.761297	1147.50804	0.26233	0.00015078	0.16445	9.4522E-05	0.42678	0.0002453	574.7611892376287	57.675	0.70835	58.23	57.848	58.557	0.55513					41	16	3	0	0	0	0.54701	1	6038	6038		52.937	11.51	1	1607400	+		184	16853	156	156	184	184		242			-0.05981163444971571
ADHSSPPLCAS	11	Unmodified	_ADHSSPPLCAS_					0	0	0			REV__nc|ENSG00000214357|A8MQ27-2|NEURL1B	REV__nc|ENSG00000214357|A8MQ27-2|NEURL1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	542.7391357421875	2	542.740031	1083.46551	0.18757	0.0001018	-0.2115	-0.00011479	-0.023934	-1.299E-05	542.7398105842881	28.773	0.69491	28.804	28.436	29.131	0.030947					49	24	3	0	0	0	0.70737	1	1372	1372		30.318	0	1	71107	+		185	23651	157	157	185	185					-0.07288558573213777
ADKATTIDVPL	11	Unmodified	_ADKATTIDVPL_					0	0	0			REV__nc|ENSG00000040275|Q96EA4-2|SPDL1	REV__nc|ENSG00000040275|Q96EA4-2|SPDL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	571.3309326171875	2	572.316428	1142.6183	1.3477	0.00077133	2.34	0.0013392	3.6878	0.0021106	572.3178522941024	102.22	0.39849	102.26	102.14	102.54	0.043198					13	9	2	0	0	0	0.17245	1	11063	11063		23.523	1.5628	1	73626	+		186	16315	158	158	186	186					0.05269960095074566
ADMVSKSANY	10	Unmodified	_ADMVSKSANY_					0	0	0		ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226549163-226553858:-|nuORF	ENSG00000143799|ENST00000366794|PARP1	ENSG00000143799|ENST00000366794|PARP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.251708984375	2	543.250231	1084.48591	2.377	0.0012913	-1.7933	-0.00097422	0.58364	0.00031706	543.2489957909198	25.663	0.76028	25.232	24.851	25.611	-0.4311					35	17	3	0	0	0	0.82886	1	1378	1378		37.812	1.3648	1	242040			187	4662	159	159	187	187					-0.05295387913406557
ADNAFNRSAVL	11	Unmodified	_ADNAFNRSAVL_					0	0	0			REV__ENST00000492364.1_1_X:19362065-19369554:+|nuORF	REV__ENST00000492364.1_1_X:19362065-19369554:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3011474609375	2	589.301644	1176.58874	-1.3243	-0.00078039	1.2159	0.00071652	-0.10838	-6.3868E-05	589.3023410763675	110.14	0.61723	110.14	110.02	110.64	0.0060425					27	16	3	0	0	0	0.48313	1	11742	11742		53.089	5.4316	1	502620	+		188	18969	160	160	188	188					0.0075044086956950196
ADNLSYNK	8	Unmodified	_ADNLSYNK_					0	0	0			REV__nc|ENSG00000177707|Q9NQS3-2|NECTIN3	REV__nc|ENSG00000177707|Q9NQS3-2|NECTIN3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	462.72308349609375	2	462.724707	923.43486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.858	1	37.835	37.335	38.335	-0.023979								0	0	0	0.3055	1	2524	2524		44.117	1.7207	1		+		189	22228	161	161	189	189					-0.029919688959580526
ADPKKALH	8	Unmodified	_ADPKKALH_					0	0	0		ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.255126953125	2	440.255977	878.497401	0.40701	0.00017919	-1.6183	-0.00071247	-1.2113	-0.00053328	440.25507557275375	63.556	1.6285	64.111	63.598	65.226	0.55449					91	38	4	0	0	0	0.80706	1	6869	6869		19.36	1.0356	1	1465000			190	1203	162	162	190	190					0.05329221962904285
ADQDSEAM	8	Unmodified	_ADQDSEAM_					0	0	0		ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	ENSG00000171914|ENST00000636159|TLN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.25579833984375	2	433.663457	865.312362	1.8234	0.00079074	0.070376	3.0519E-05	1.8938	0.00082126	433.664101667188	106.96	0.17432	107.06	106.99	107.16	0.10395					7	4	2	0	0	0	0.4196	1	13045	13045		50.025	0	1	53783			191	6723;4170	163	163	191	191					-0.12568173689680862
ADQLPRLLARA	11	Unmodified	_ADQLPRLLARA_					0	0	0		ENSG00000130720|ENST00000372338|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9329833984375	3	408.578811	1222.7146	0.46165	0.00018862	-2.1121	-0.00086297	-1.6505	-0.00067435	408.57780262600403	16.328	0.29393	16.304	16.183	16.477	-0.024035					24	13	3	0	0	0	0.17334	1	140	140		34.087	20	1	180060			192	3672	164	164	192	192					0.11215572445667021
ADRRLLRRCRL	11	Unmodified	_ADRRLLRRCRL_					0	0	0		ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-2|CASP9;nc|ENSG00000132906|P55211-3|CASP9	ENSG00000132906|ENST00000333868|CASP9	ENSG00000132906|ENST00000333868|CASP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.62335205078125	3	476.621127	1426.84155	2.8112	0.0013399	2.5746	0.0012271	5.3858	0.002567	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.7896	1	13219	13219		13.508	3.404	1	2689700			193	3838	165	165	193	193					0.1452059511900643
ADRRLRLRR	9	Unmodified	_ADRRLRLRR_					0	0	0			REV__ENSG00000237172|ENST00000449549|B3GNT9	REV__ENSG00000237172|ENST00000449549|B3GNT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.9225158691406	3	404.590045	1210.7483	-1.2934	-0.00052329	-1.6561	-0.00067006	-2.9495	-0.0011933	404.5892229323439	41.136	1.2646	41.095	40.508	41.772	-0.04081					80	34	3	0	0	0	0.7932	1	3102	3102		16.717	0.79673	1	339150	+		194	23794	166	166	194	194					0.15136038728041967
ADRSKKLQP	9	Unmodified	_ADRSKKLQP_					0	0	0		ENST00000379573.6_1_20:3801261-3802808:+|nuORF	ENST00000379573.6_1_20:3801261-3802808:+|nuORF	ENST00000379573.6_1_20:3801261-3802808:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.8059692382812	2	521.803823	1041.59309	-0.11311	-5.9022E-05	4.3887	0.00229	4.2756	0.002231	521.8059245005005	44.852	1.3013	45.315	44.578	45.88	0.46313					77	31	3	0	0	0	0.76255	1	4102	4102		35.618	4.0885	1	1090800			195	10897	167	167	195	195					0.073959500831279
ADRTIESLY	9	Unmodified	_ADRTIESLY_					0	0	0		nc|ENSG00000132321|Q86XH1-2|IQCA1;nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1	nc|ENSG00000132321|Q86XH1-2|IQCA1	nc|ENSG00000132321|Q86XH1-2|IQCA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.2703247070312	2	534.272021	1066.52949	-0.22615	-0.00012083	1.6388	0.00087558	1.4127	0.00075476	534.2729778979023	45.908	0.46914	45.879	45.627	46.096	-0.028782					13	10	2	0	0	0	0.51307	1	3749	3749		51.335	5.3632	1	88251			196	3780	168	168	196	196					-0.0011145514461077255
ADRTIESLY	9	Unmodified	_ADRTIESLY_					0	0	0		nc|ENSG00000132321|Q86XH1-2|IQCA1;nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1	nc|ENSG00000132321|Q86XH1-2|IQCA1	nc|ENSG00000132321|Q86XH1-2|IQCA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	534.272021	1066.52949	0.16489	8.8098E-05	1.1831	0.00063207	1.3479	0.00072017	534.7739537159174	45.82	0.40534	45.816	45.663	46.069	-0.0041618	-0.088511	-0.0017127	NaN	51.335	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60548			197	3780	168	168							-0.0011145514461077255
ADRTIESLY	9	Unmodified	_ADRTIESLY_					0	0	0		nc|ENSG00000132321|Q86XH1-2|IQCA1;nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1	nc|ENSG00000132321|Q86XH1-2|IQCA1	nc|ENSG00000132321|Q86XH1-2|IQCA1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	534.272021	1066.52949	-0.53151	-0.00028397	2.9469	0.0015745	2.4154	0.0012905	534.2723450179525	45.546	0.20217	46.018	45.888	46.09	0.4714	0.11351	0.00017212	NaN	51.335	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85012			198	3780	168	168							-0.0011145514461077255
ADSLANPLQL	10	Unmodified	_ADSLANPLQL_					0	0	0		ENSG00000196428|ENST00000688009|TSC22D2;nc|ENSG00000196428|O75157|TSC22D2	ENSG00000196428|ENST00000688009|TSC22D2	ENSG00000196428|ENST00000688009|TSC22D2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2810668945312	2	521.282389	1040.55022	-0.85405	-0.0004452	0.21018	0.00010956	-0.64388	-0.00033564	521.2823263181323	42.715	0.7851	43.148	42.842	43.627	0.4334					44	18	3	0	0	0	0.33399	1	3820	3820		69.628	3.1983	1	1074400			199	8053	169	169	197	197					0.031571352350511006
ADSLSDDEEQK	11	Unmodified	_ADSLSDDEEQK_					0	0	0			REV__nc|ENSG00000099814|Q9Y4F5-3|CEP170B	REV__nc|ENSG00000099814|Q9Y4F5-3|CEP170B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.7664184570312	2	618.764954	1235.51536	-0.056916	-3.5218E-05	1.1666	0.00072185	1.1097	0.00068663	618.7656465057197	31.606	0.61924	31.624	31.29	31.909	0.018362					28	13	3	0	0	0	0.72739	1	1707	1707		27.047	3.5246	1	99905	+		200	17106	170	170	198	198					-0.09298197154225818
ADVEGLSVL	9	Unmodified	_ADVEGLSVL_					0	0	0		nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.745361328125	2	451.745108	901.475663	-0.092061	-4.1588E-05	1.7939	0.00081036	1.7018	0.00076878	451.7457658869967	34.705	0.79864	34.701	34.334	35.132	-0.0047417					49	20	3	0	0	0	0.78983	1	2125	2125		27.882	3.6795	1	211490			201	313;8110	171	171	199	199					0.02098372423665751
ADVPLVVE	8	Unmodified	_ADVPLVVE_					0	0	0		ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.7823791503906	2	421.236919	840.459284	-1.8626	-0.0007846	3.0598	0.0012889	1.1972	0.00050431	421.2381118940465	35.403	0.89819	35.434	35.255	36.153	0.031132					42	25	2	0	0	0	0.4196	1	1953	1953		18.324	0	1	109810			202	3814	172	172	200	200					0.032672912575776536
ADVTQILQDQS	11	Unmodified	_ADVTQILQDQS_					0	0	0		ENST00000311637.9_2_20:50216404-50216899:-|nuORF	ENST00000311637.9_2_20:50216404-50216899:-|nuORF	ENST00000311637.9_2_20:50216404-50216899:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.53900146484375	3	406.538458	1216.59355	-0.33641	-0.00013676	1.974	0.00080249	1.6376	0.00066573	406.53915043709776	30.749	0.82197	30.702	30.309	31.131	-0.047064					63	21	4	0	0	0	0.66858	1	1702	1702		36.528	1.3497	1	318470			203	9933	173	173	201	201					-0.0060871977832448465
AEAEQTLRF	9	Unmodified	_AEAEQTLRF_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.7723999023438	2	532.772188	1063.52982	0.15842	8.4404E-05	-0.39675	-0.00021138	-0.23833	-0.00012697	532.7718076701411	48.549	0.69714	48.544	48.171	48.869	-0.0056381					30	15	3	0	0	0	0.15708	1	4006	4006		82.75	22.632	1	241860			204	5149	174	174	202	202					0.0005996457523451681
AEAEQTLRF	9	Unmodified	_AEAEQTLRF_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.7717895507812	2	532.772188	1063.52982	-0.12545	-6.6837E-05	-0.32248	-0.00017181	-0.44793	-0.00023865	532.7719286660782	48.478	0.60995	48.453	48.139	48.749	-0.025112					25	13	2	0	0	0	0.07589	3	4090	4078;4090;4102		98.629	10.875	1	245730			205	5149	174	174	203;204;205	204					0.0005996457523451681
AEAEQTLRF	9	Unmodified	_AEAEQTLRF_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.7720336914062	2	532.772188	1063.52982	0.40969	0.00021827	-0.80466	-0.0004287	-0.39496	-0.00021043	532.7716693432346	48.491	0.73569	48.492	48.189	48.925	0.00016785					27	16	2	0	0	0	0.07589	3	4038	4028;4038;4051		98.629	23.489	1	306420			206	5149	174	174	206;207;208	207					0.0005996457523451681
AEAFLEHLW	9	Unmodified	_AEAFLEHLW_					0	0	0		nc|ENSG00000085721|Q9NYV6-3|RRN3;ENSG00000085721|ENST00000198767|RRN3;nc|ENSG00000248124|Q2M238|RRN3P1;nc|ENSG00000085721|Q9NYV6-4|RRN3	nc|ENSG00000085721|Q9NYV6-3|RRN3;nc|ENSG00000085721|Q9NYV6-4|RRN3	nc|ENSG00000085721|Q9NYV6-4|RRN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.2797241210938	2	558.279649	1114.54475	-1.0222	-0.00057066	0.79626	0.00044454	-0.22591	-0.00012612	558.2800731236568	80.138	0.7921	80.2	79.763	80.555	0.062225					57	28	3	0	0	0	9.9902E-05	6	7843	7819;7827;7836;7843;7852;7859		147.69	78.6	1	309130			207	1537;14792	175	175	209;210;211;212;213;214	212					-0.007945435567535242
AEAFLEHLW	9	Unmodified	_AEAFLEHLW_					0	0	0		nc|ENSG00000085721|Q9NYV6-3|RRN3;ENSG00000085721|ENST00000198767|RRN3;nc|ENSG00000248124|Q2M238|RRN3P1;nc|ENSG00000085721|Q9NYV6-4|RRN3	nc|ENSG00000085721|Q9NYV6-3|RRN3;nc|ENSG00000085721|Q9NYV6-4|RRN3	nc|ENSG00000085721|Q9NYV6-4|RRN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.2791137695312	2	558.279649	1114.54475	0.68326	0.00038145	-0.83838	-0.00046805	-0.15512	-8.6601E-05	558.2790683815153	80.303	0.87892	80.246	79.834	80.713	-0.056862					65	32	3	0	0	0	0.09311	5	8063	8044;8053;8063;8071;8082		94.006	38.673	1	316600			208	1537;14792	175	175	215;216;217;218;219	217					-0.007945435567535242
AEAFLEHLW	9	Unmodified	_AEAFLEHLW_					0	0	0		nc|ENSG00000085721|Q9NYV6-3|RRN3;ENSG00000085721|ENST00000198767|RRN3;nc|ENSG00000248124|Q2M238|RRN3P1;nc|ENSG00000085721|Q9NYV6-4|RRN3	nc|ENSG00000085721|Q9NYV6-3|RRN3;nc|ENSG00000085721|Q9NYV6-4|RRN3	nc|ENSG00000085721|Q9NYV6-4|RRN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.2794189453125	2	558.279649	1114.54475	0.74069	0.00041351	-0.89505	-0.00049969	-0.15436	-8.6175E-05	558.2791515824711	80.091	0.60709	80.145	79.779	80.386	0.053841					51	23	3	0	0	0	0.026451	5	7940	7908;7915;7923;7931;7940		120.62	71.179	1	257970			209	1537;14792	175	175	220;221;222;223;224	224					-0.007945435567535242
AEAKEKIYL	9	Unmodified	_AEAKEKIYL_					0	0	0		nc|ENSG00000133706|Q9P2J5-2|LARS1;ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF	nc|ENSG00000133706|Q9P2J5-2|LARS1	nc|ENSG00000133706|Q9P2J5-2|LARS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.8029174804688	2	532.802957	1063.59136	0.89478	0.00047674	-0.48978	-0.00026096	0.405	0.00021579	532.8025426216794	34.595	0.4902	34.805	34.563	35.053	0.21002					18	11	2	0	0	0	0.24527	1	2572	2572		69.628	5.4204	1	475420			210	3890	176	176	225	225					0.062108962745242025
AEALERGNLEP	11	Unmodified	_AEALERGNLEP_					0	0	0		ENST00000266070.8_1_20:61569163-61569223:-|nuORF	ENST00000266070.8_1_20:61569163-61569223:-|nuORF	ENST00000266070.8_1_20:61569163-61569223:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2059020996094	3	400.206932	1197.59897	1.1135	0.00044562	-2.6227	-0.0010496	-1.5092	-0.000604	400.205871488672	26.783	0.58429	26.607	26.431	27.016	-0.17559					19	12	2	0	0	0	0.74771	1	1495	1495		22.562	0.78116	1	85206			211	9519	177	177	226	226					0.008070038041296357
AEALERGNLEP	11	Unmodified	_AEALERGNLEP_					0	0	0		ENST00000266070.8_1_20:61569163-61569223:-|nuORF	ENST00000266070.8_1_20:61569163-61569223:-|nuORF	ENST00000266070.8_1_20:61569163-61569223:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	400.206932	1197.59897	1.685	0.00067435	-3.6365	-0.0014554	-1.9515	-0.00078102	400.2053882199874	26.816	0.9241	26.475	26.186	27.11	-0.34035	-0.066091	-0.00061623	NaN	22.562	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103550			212	9519	177	177							0.008070038041296357
AEALWELL	8	Unmodified	_AEALWELL_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.276611328125	2	472.758018	943.501483	-0.012813	-6.0573E-06	-4.1583	-0.0019659	-4.1711	-0.0019719	472.7558371955076	37.112	0.82436	37.597	37.201	38.025	0.48581					32	19	2	0	0	0	0.4196	1	2965	2965		33.516	0	1	139200	+		213	20278	178	178	227	227					0.02747266665949155
AEARLLEQ	8	Unmodified	_AEARLLEQ_					0	0	0			REV__chr5:69366595-69366696|43|14.14|0.0|20.43|-|1|TAF9,TAF9|1	REV__chr5:69366595-69366696|43|14.14|0.0|20.43|-|1|TAF9,TAF9|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.25592041015625	2	465.256174	928.497795	-0.23044	-0.00010722	0.42849	0.00019936	0.19805	9.2143E-05	465.2561051188786	25.962	1.0624	25.704	25.424	26.486	-0.2572					62	23	5	0	0	0	0.16379	1	1380	1380		110.12	5.3733	1	1300900	+		214	15859	179	179	228	228					0.030685968921034146
AEARLLEQ	8	Unmodified	_AEARLLEQ_					0	0	0			REV__chr5:69366595-69366696|43|14.14|0.0|20.43|-|1|TAF9,TAF9|1	REV__chr5:69366595-69366696|43|14.14|0.0|20.43|-|1|TAF9,TAF9|1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	465.256174	928.497795	-0.23044	-0.00010722	0.42849	0.00019936	0.19805	9.2143E-05	465.2561051188786	25.962	1.0624	25.704	25.424	26.486	-0.2572	0.063213	0.0012387	NaN	110.12	62	23	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1300900	+		215	15859	179	179							0.030685968921034146
AEATEEVSL	9	Unmodified	_AEATEEVSL_					0	0	0		ENSG00000205302|ENST00000379516|SNX2;ENST00000505854.5_1_5:122110798-122139331:+|nuORF	ENSG00000205302|ENST00000379516|SNX2	ENSG00000205302|ENST00000379516|SNX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.7295837402344	2	474.729655	947.444756	0.15849	7.5239E-05	-0.27447	-0.0001303	-0.11598	-5.506E-05	474.72938643085945	51.929	0.45942	52.352	52.021	52.481	0.42348					24	10	3	0	0	0	0.12652	2	5179	5169;5179		87.754	7.8151	1	767800			216	8522	180	180	229;230	230					-0.03106825681220471
AEATEEVSL	9	Unmodified	_AEATEEVSL_					0	0	0		ENSG00000205302|ENST00000379516|SNX2;ENST00000505854.5_1_5:122110798-122139331:+|nuORF	ENSG00000205302|ENST00000379516|SNX2	ENSG00000205302|ENST00000379516|SNX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.729736328125	2	474.729655	947.444756	-0.42593	-0.0002022	0.38929	0.00018481	-0.036641	-1.7395E-05	474.729706028266	51.704	0.49336	52.371	52.063	52.556	0.66729					26	11	3	0	0	0	0.10807	1	5171	5171		90.777	7.4895	1	984990			217	8522	180	180	231	231					-0.03106825681220471
AEATRVRK	8	Unmodified	_AEATRVRK_					0	0	0			REV__chr1:3940698-3940994|22|21.95|0.17|6.98|+|2|LINC01346,LINC01346|1	REV__chr1:3940698-3940994|22|21.95|0.17|6.98|+|2|LINC01346,LINC01346|1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7784423828125	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.113	1	79.243	78.743	79.743	0.13086								0	0	0	0.29871	1	7489	7489		23.042	0.0057756	1		+		218	15450	181	181	232	232					0.07307411740180214
AECQGGNTIV	10	Unmodified	_AECQGGNTIV_					0	0	0			REV__ENSG00000086967|ENST00000357701|MYBPC2	REV__ENSG00000086967|ENST00000357701|MYBPC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2769470214844	2	496.229299	990.444045	-0.30924	-0.00015345	-0.17953	-8.9089E-05	-0.48877	-0.00024254	496.22906316434484	77.333	0.64406	77.901	77.575	78.219	0.56836					18	14	2	0	0	0	0.37624	1	8821	8821		49.536	7.1399	1	104040	+		219	16916	182	182	233	233					-0.051559436019374516
AEDKDTPAL	9	Unmodified	_AEDKDTPAL_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2377624511719	2	480.237647	958.460741	0.99273	0.00047675	-1.0435	-0.00050113	-0.050775	-2.4384E-05	480.23702546069455	33.355	0.79565	33.524	33.229	34.025	0.16971					39	18	3	0	0	0	0.026116	3	2396	2396;2407;2422		120.87	35.708	1	815100			220	1560	183	183	234;235;236	234					-0.020151194443315035
AEDKDTPAL	9	Unmodified	_AEDKDTPAL_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.23724365234375	2	480.237647	958.460741	0.31099	0.00014935	-0.50741	-0.00024368	-0.19642	-9.4329E-05	480.23734733400903	33.378	0.79589	33.59	33.228	34.024	0.21168					43	18	3	0	0	0	0.039957	2	2409	2399;2409		112.41	32.96	1	886210			221	1560	183	183	237;238	238					-0.020151194443315035
AEDLLLIKP	9	Unmodified	_AEDLLLIKP_					0	0	0			REV__nc|ENSG00000004846|Q2M3G0-1|ABCB5;REV__nc|ENSG00000005471|P21439-3|ABCB4;REV__ENSG00000073734|ENST00000650372|ABCB11;REV__nc|ENSG00000085563|P08183-2|ABCB1;REV__ENSG00000135776|ENST00000344517|ABCB10	REV__ENSG00000135776|ENST00000344517|ABCB10	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3085632324219	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.235	1	43.235	42.735	43.735	0								0	0	0	0.31117	1	3053	3053		26.693	0	1		+		222	19250;16894;16087;16066;16678	184	184	239	239					0.09632084279905939
AEDLLLLN	8	Unmodified	_AEDLLLLN_					0	0	0		ENSG00000168038|ENST00000301831|ULK4	ENSG00000168038|ENST00000301831|ULK4	ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.75482177734375	2	450.755475	899.496398	-0.14135	-6.3713E-05	-2.6678	-0.0012025	-2.8092	-0.0012662	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.84341	1	7915	7915		24.203	1.1603	1	337080			223	6361	185	185	240	240					0.042629628033296285
AEDPLGAIHL	10	Unmodified	_AEDPLGAIHL_					0	0	0		ENSG00000115956|ENST00000234313|PLEK	ENSG00000115956|ENST00000234313|PLEK	ENSG00000115956|ENST00000234313|PLEK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.2769775390625	2	518.277106	1034.53966	-0.5382	-0.00027893	0.22897	0.00011867	-0.30923	-0.00016026	518.2772899607126	72.949	0.97472	73.334	72.75	73.725	0.38581					95	23	6	0	0	0	2.5856E-11	5	8184	8137;8160;8172;8184;8198		162.31	95.876	1	6504500			224	2885	186	186	241;242;243;244;245	244					0.023771525806296268
AEDPLGAIHL	10	Unmodified	_AEDPLGAIHL_					0	0	0		ENSG00000115956|ENST00000234313|PLEK	ENSG00000115956|ENST00000234313|PLEK	ENSG00000115956|ENST00000234313|PLEK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2767944335938	2	518.277106	1034.53966	0.019183	9.9421E-06	-0.45883	-0.0002378	-0.43964	-0.00022786	518.2769577495426	72.785	0.93272	73.339	72.86	73.792	0.55386					97	22	6	0	0	0	5.8165E-11	5	8192	8147;8156;8180;8192;8204		157.21	79.891	1	7270100			225	2885	186	186	246;247;248;249;250	249					0.023771525806296268
AEDVFIADF	9	Unmodified	_AEDVFIADF_					0	0	0			REV__ENSG00000134452|ENST00000362091|FBH1	REV__ENSG00000134452|ENST00000362091|FBH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7422485351562	2	513.742565	1025.47058	1.5547	0.00079874	-2.5144	-0.0012917	-0.95963	-0.000493	513.7411791854225	93.595	0.71108	94.036	93.691	94.402	0.441					41	18	5	0	0	0	0.15928	2	11167	11144;11167		82.305	11.009	1	1190300	+		226	19143	187	187	251;252	252					-0.04113931438951113
AEDVFIADF	9	Unmodified	_AEDVFIADF_					0	0	0			REV__ENSG00000134452|ENST00000362091|FBH1	REV__ENSG00000134452|ENST00000362091|FBH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7412109375	2	513.742565	1025.47058	0.12314	6.3263E-05	-0.83602	-0.0004295	-0.71288	-0.00036624	513.7419489251383	93.773	0.646	94.208	93.807	94.453	0.43539					41	15	4	0	0	0	0.14386	1	11236	11236		84.916	23.944	1	1350700	+		227	19143	187	187	253	253					-0.04113931438951113
AEDYPIDLY	9	Unmodified	_AEDYPIDLY_					0	0	0		nc|ENSG00000150093|P05556-2|ITGB1;ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.7523803710938	2	549.75313	1097.49171	-0.56703	-0.00031173	0.82016	0.00045089	0.25313	0.00013916	549.7532867663541	78.663	0.68674	78.719	78.382	79.069	0.056114					40	18	3	0	0	0	0.17307	2	7643	7632;7643		79.451	29.426	1	204010			228	5059	188	188	254;255	255					-0.05313966130074732
AEDYPIDLY	9	Unmodified	_AEDYPIDLY_					0	0	0		nc|ENSG00000150093|P05556-2|ITGB1;ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.753662109375	2	549.75313	1097.49171	0.733	0.00040297	-0.59822	-0.00032887	0.13477	7.4092E-05	549.7525919928764	78.64	0.66089	78.587	78.258	78.919	-0.053558					36	16	3	0	0	0	0.17307	2	7845	7835;7845		79.451	29.426	1	200760			229	5059	188	188	256;257	257					-0.05313966130074732
AEDYPIDLY	9	Unmodified	_AEDYPIDLY_					0	0	0		nc|ENSG00000150093|P05556-2|ITGB1;ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.7523193359375	2	549.75313	1097.49171	0.56536	0.00031081	-0.45714	-0.00025132	0.10821	5.949E-05	549.7526472667126	78.493	0.58603	78.545	78.234	78.82	0.051674					37	14	4	0	0	0	0.31972	3	7718	7706;7718;7729		63.306	8.9743	1	226450			230	5059	188	188	258;259;260	259					-0.05313966130074732
AEEDHVDLSL	10	Unmodified	_AEEDHVDLSL_					0	0	0		ENSG00000124762|ENST00000244741|CDKN1A	ENSG00000124762|ENST00000244741|CDKN1A	ENSG00000124762|ENST00000244741|CDKN1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.2648315429688	2	564.264393	1126.51423	0.21963	0.00012393	0.30234	0.0001706	0.52198	0.00029453	564.2643912374706	56.128	0.66045	56.525	56.193	56.853	0.39672					39	17	3	0	0	0	0.14079	1	5781	5781		96.19	26.563	1	2120900			231	3357	189	189	261	261					-0.04396366732453316
AEEDSGDMCD	10	Unmodified	_AEEDSGDMCD_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.1672973632812	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.886	1	21.968	21.468	22.468	0.081615								0	0	0	0.45132	1	633	633		10.265	0	1		+		232	18541	190	190	262	262					-0.21549077329086685
AEEFYNELL	9	Unmodified	_AEEFYNELL_					0	0	0		nc|ENSG00000173226|Q15051-3|IQCB1;ENSG00000173226|ENST00000310864|IQCB1;ENST00000498104.1_2_3:121526239-121545017:-|nuORF;nc|ENSG00000173226|Q15051-2|IQCB1	nc|ENSG00000173226|Q15051-3|IQCB1	nc|ENSG00000173226|Q15051-3|IQCB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.2662353515625	2	564.266404	1126.51826	0.21963	0.00012393	-3.2622	-0.0018408	-3.0426	-0.0017168	564.2643912374706	56.128	0.66045	56.525	56.193	56.853	0.39672					39	17	3	0	0	0	0.25483	1	5771	5771		68.787	0	1	2120900			233	6842	191	191	263	263					-0.03994277238757604
AEEKALKRVR	10	Unmodified	_AEEKALKRVR_					0	0	0		ENSG00000157613|ENST00000621158|CREB3L1;nc|ENSG00000157613|Q96BA8-2|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5804748535156	3	400.578811	1198.7146	3.4047	0.0013639	0.5947	0.00023823	3.9995	0.0016021	400.578997947783	111.61	0.85251	111.65	111	111.85	0.041832					50	28	2	0	0	0	0.85259	1	13517	13517		20.03	0	1	3662700			234	5441	192	192	264	264					0.12319572445630911
AEEKMPLSL	9	Unmodified	_AEEKMPLSL_					0	0	0		nc|ENSG00000111913|Q9Y4F9|RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2	nc|ENSG00000111913|Q9Y4F9|RIPOR2	nc|ENSG00000111913|Q9Y4F9|RIPOR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2684020996094	2	509.267893	1016.52123	0.11866	6.0432E-05	0.2321	0.0001182	0.35076	0.00017863	509.2677546829595	55.92	1.2544	56.321	55.866	57.12	0.40101					63	31	3	0	0	0	2.0213E-05	6	5747	5724;5735;5747;5760;5770;5780		154.12	30.038	1	2525900			235	2625	193	193	265;266;267;268;269;270	267					0.013632746144139674
AEEKMPLSL	9	Unmodified	_AEEKMPLSL_					0	0	0		nc|ENSG00000111913|Q9Y4F9|RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2	nc|ENSG00000111913|Q9Y4F9|RIPOR2	nc|ENSG00000111913|Q9Y4F9|RIPOR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.26739501953125	2	509.267893	1016.52123	1.0642	0.00054197	-0.62721	-0.00031942	0.437	0.00022255	509.2673089060536	55.749	0.84582	56.309	55.857	56.703	0.55953					49	21	3	0	0	0	2.0213E-05	4	5749	5737;5749;5760;5768		154.12	46.031	1	3176800			236	2625	193	193	271;272;273;274	272					0.013632746144139674
AEELLRIGL	9	Unmodified	_AEELLRIGL_					0	0	0		nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-2|CCT8	nc|ENSG00000156261|P50990-2|CCT8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.302734375	2	507.303124	1012.5917	-0.47968	-0.00024334	0.58474	0.00029664	0.10506	5.3297E-05	507.3032810804758	70.788	0.91948	71.172	70.832	71.751	0.38416					44	21	3	0	0	0	0.086373	2	7854	7854;7868		95.815	16.813	1	638460			237	5372	194	194	275;276	275					0.08590315994376851
AEELLRIGL	9	Unmodified	_AEELLRIGL_					0	0	0		nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-2|CCT8	nc|ENSG00000156261|P50990-2|CCT8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3032531738281	2	507.303124	1012.5917	0.70204	0.00035615	-0.56168	-0.00028494	0.14036	7.1203E-05	507.30265368640494	70.731	1.0611	71.278	70.803	71.864	0.54756					49	25	3	0	0	0	0.051853	3	7875	7875;7888;7900		107.01	31.608	1	642600			238	5372	194	194	277;278;279	277					0.08590315994376851
AEEPIHSGP	9	Unmodified	_AEEPIHSGP_					0	0	0			REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.7225341796875	2	468.724707	935.43486	-1.0176	-0.000477	-1.941	-0.00090978	-2.9586	-0.0013868	468.7236481671381	70.265	0.71931	70.303	70.071	70.79	0.038055					54	36	2	0	0	0	0.78983	1	6737	6737		27.882	2.4321	1	311830	+		239	18180	195	195	280	280					-0.03543968895939997
AEEPLAGRTW	10	Unmodified	_AEEPLAGRTW_					0	0	0		ENST00000529704.5_1_11:67119307-67120167:-|nuORF;ENST00000534515.1_1_11:67119307-67119526:-|nuORF	ENST00000529704.5_1_11:67119307-67120167:-|nuORF	ENST00000529704.5_1_11:67119307-67120167:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	565.288330078125	2	565.285463	1128.55637	-1.1582	-0.00065471	0.85785	0.00048493	-0.30034	-0.00016978	565.2857053012276	51.426	0.68999	51.424	51.055	51.745	-0.0020447					24	15	2	0	0	0	0.31985	2	4402	4402;4415		70.816	16.094	1	118660			240	13332	196	196	281;282	281					-0.002763465334282955
AEEPLAGRTW	10	Unmodified	_AEEPLAGRTW_					0	0	0		ENST00000529704.5_1_11:67119307-67120167:-|nuORF;ENST00000534515.1_1_11:67119307-67119526:-|nuORF	ENST00000529704.5_1_11:67119307-67120167:-|nuORF	ENST00000529704.5_1_11:67119307-67120167:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	565.2846069335938	2	565.285463	1128.55637	-0.47259	-0.00026715	0.22129	0.00012509	-0.2513	-0.00014205	565.2854068623111	51.357	0.53878	51.334	51.027	51.566	-0.02343					21	12	2	0	0	0	0.3872	1	4489	4489		65.157	22.761	1	183050			241	13332	196	196	283	283					-0.002763465334282955
AEEPLAGRTW	10	Unmodified	_AEEPLAGRTW_					0	0	0		ENST00000529704.5_1_11:67119307-67120167:-|nuORF;ENST00000534515.1_1_11:67119307-67119526:-|nuORF	ENST00000529704.5_1_11:67119307-67120167:-|nuORF	ENST00000529704.5_1_11:67119307-67120167:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	565.2833862304688	2	565.285463	1128.55637	0.52731	0.00029808	-0.81918	-0.00046307	-0.29187	-0.00016499	565.2847479787597	51.43	0.59099	51.442	51.136	51.727	0.012436					25	13	3	0	0	0	0.24988	3	4428	4417;4428;4440		78.264	15.772	1	119640			242	13332	196	196	284;285;286	285					-0.002763465334282955
AEEQQKKL	8	Unmodified	_AEEQQKKL_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A;REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENSG00000153253|ENST00000283254|SCN3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.26904296875	2	487.269281	972.52401	-1.38	-0.00067244	1.2041	0.0005867	-0.17598	-8.5747E-05	487.2698048967584	29.28	1.924	29.261	27.915	29.839	-0.019407					106	57	3	0	0	0	0.93293	1	1473	1473		51.335	0	1	505130	+		243	15734;19317	197	197	287	287					0.03664866063570571
AEETRAFEQ	9	Unmodified	_AEETRAFEQ_					0	0	0		ENST00000561218.5_1_15:91073303-91143644:+|nuORF;nc|ENSG00000140577|Q6UUV7-3|CRTC3;ENSG00000140577|ENST00000268184|CRTC3	ENST00000561218.5_1_15:91073303-91143644:+|nuORF	ENST00000561218.5_1_15:91073303-91143644:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.286376953125	2	540.751453	1079.48835	0.90256	0.00048806	3.1752	0.001717	4.0777	0.002205	540.7531628325412	20.228	0.14212	20.207	20.125	20.267	-0.020924					8	6	2	0	0	0	0.20789	1	472	472		24.519	0	1	45610			244	4450	198	198	288	288					-0.04821216184109289
AEETTRLRKP	10	Unmodified	_AEETTRLRKP_					0	0	0		ENSG00000176182|ENST00000322217|MYPOP	ENSG00000176182|ENST00000322217|MYPOP	ENSG00000176182|ENST00000322217|MYPOP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	600.3333129882812	2	600.838394	1199.66223	-1.2868	-0.00077318	-3.9368	-0.0023654	-5.2237	-0.0031386	600.8364711977831	94.417	1.8552	94.615	94.203	96.058	0.19827					60	44	2	0	0	0	0.37624	1	9593	9593		35.152	0	1	352090			245	7061	199	199	289	289					0.07038989312036392
AEFEPLHID	9	Unmodified	_AEFEPLHID_					0	0	0		nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9;ENSG00000177200|ENST00000447540|CHD9	nc|ENSG00000177200|Q3L8U1-2|CHD9	nc|ENSG00000177200|Q3L8U1-2|CHD9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.30517578125	2	535.761289	1069.50803	0.0082862	4.4394E-06	0.40479	0.00021687	0.41308	0.00022131	535.7614249571258	51.491	0.50169	51.927	51.659	52.16	0.43505					15	11	2	0	0	0	0.20789	1	5112	5112		15.642	0	1	167520			246	7128	200	200	290	290					-0.023948401733377978
AEFKEAFQL	9	Unmodified	_AEFKEAFQL_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.7800903320312	2	541.779482	1081.54441	-1.2698	-0.00068796	1.1278	0.00061102	-0.14201	-7.6936E-05	541.7800031151643	62.773	1.3838	63.161	62.708	64.092	0.38779					78	31	4	0	0	0	0.0041213	5	6723	6711;6723;6734;6746;6759		138.06	21.996	1	1620800			247	1704;14801	201	201	291;292;293;294;295	292					0.0069003672338112665
AEFKEAFQL	9	Unmodified	_AEFKEAFQL_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.7792358398438	2	541.779482	1081.54441	-0.26373	-0.00014288	0.37546	0.00020342	0.11173	6.0534E-05	541.7795266795115	62.674	1.2689	63.228	62.82	64.089	0.5545					70	29	4	0	0	0	0.018862	5	6734	6713;6722;6734;6759;6774		126.24	18.853	1	1704100			248	1704;14801	201	201	296;297;298;299;300	298					0.0069003672338112665
AEFKEAFQL	9	Unmodified	_AEFKEAFQL_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	541.779482	1081.54441	-0.59479	-0.00032225	0.51212	0.00027746	-0.082669	-4.4788E-05	542.2810545946292	63.111	0.075855	63.134	63.089	63.165	0.022984	-0.040483	-0.00030222	NaN	138.06	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36740			249	1704;14801	201	201							0.0069003672338112665
AEFKEAFQLF	10	Unmodified	_AEFKEAFQLF_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.3135375976562	2	615.313689	1228.61282	-0.36025	-0.00022167	0.69492	0.0004276	0.33467	0.00020593	615.3140495808801	80.594	1.1244	80.656	80.19	81.315	0.062225					71	31	4	0	0	0	0.098191	4	7907	7880;7890;7894;7907		101.46	24.629	1	822420			250	1704;14801	202	202	301;302;303;304	304					0.007662813032311533
AEFKEAFQLF	10	Unmodified	_AEFKEAFQLF_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	615.3123779296875	2	615.313689	1228.61282	0.59106	0.00036368	-0.24755	-0.00015232	0.3435	0.00021136	615.3134003529922	80.681	1.4856	80.621	80.319	81.804	-0.059692					73	35	4	0	0	0	0.22362	4	8116	8103;8116;8128;8141		81.525	29.953	1	762530			251	1704;14801	202	202	305;306;307;308	306					0.007662813032311533
AEFKEAFQLF	10	Unmodified	_AEFKEAFQLF_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	615.312744140625	2	615.313689	1228.61282	-0.17688	-0.00010884	0.43502	0.00026768	0.25814	0.00015884	615.3138709695847	80.464	1.4098	80.52	80.187	81.597	0.055916					65	34	4	0	0	0	0.14207	4	7997	7971;7984;7997;8010		96.034	32.5	1	775160			252	1704;14801	202	202	309;310;311;312	311					0.007662813032311533
AEFKEAFQLF	10	Unmodified	_AEFKEAFQLF_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	615.3128051757812	2	615.313689	1228.61282	0.21283	0.00013096	0.18503	0.00011385	0.39786	0.00024481	615.3136854531094	79.97	1.2687	80.386	79.87	81.139	0.41621					73	29	4	0	0	0	0.035866	2	9170	9159;9170		112.11	18.869	1	3045600			253	1704;14801	202	202	313;314	314					0.007662813032311533
AEFKEAFQLF	10	Unmodified	_AEFKEAFQLF_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	615.312744140625	2	615.313689	1228.61282	0.3965	0.00024397	-0.14376	-8.8459E-05	0.25274	0.00015551	615.3135262546291	79.833	0.97301	80.383	80.042	81.015	0.54945					71	22	5	0	0	0	0.046234	3	9190	9179;9190;9196		109.44	18.838	1	2966500			254	1704;14801	202	202	315;316;317	316					0.007662813032311533
AEFKEAFSLF	10	Unmodified	_AEFKEAFSLF_					0	0	0		ENST00000597868.5_1_19:47104691-47111872:+|nuORF;ENST00000556757.5_1_14:90863574-90867886:+|nuORF;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;ENSG00000198668|ENST00000356978|CALM1;ENSG00000160014|ENST00000291295|CALM3;ENSG00000143933|ENST00000272298|CALM2	ENST00000597868.5_1_19:47104691-47111872:+|nuORF	ENST00000597868.5_1_19:47104691-47111872:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	594.80078125	2	594.800414	1187.58628	-0.59855	-0.00035602	0.59437	0.00035353	-0.0041893	-2.4918E-06	594.8007596638064	81.346	0.67841	81.41	81.098	81.777	0.064392					33	15	3	0	0	0	0.21012	2	8008	8008;8021		83.647	17.218	1	240830			255	4677	203	203	318;319	318					-1.4075880926611717E-05
AEFKEAFSLF	10	Unmodified	_AEFKEAFSLF_					0	0	0		ENST00000597868.5_1_19:47104691-47111872:+|nuORF;ENST00000556757.5_1_14:90863574-90867886:+|nuORF;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;ENSG00000198668|ENST00000356978|CALM1;ENSG00000160014|ENST00000291295|CALM3;ENSG00000143933|ENST00000272298|CALM2	ENST00000597868.5_1_19:47104691-47111872:+|nuORF	ENST00000597868.5_1_19:47104691-47111872:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	594.80078125	2	594.800414	1187.58628	0.95237	0.00056647	-1.1423	-0.00067944	-0.18993	-0.00011297	594.7997403026163	81.425	0.67094	81.362	81.087	81.758	-0.062943					36	15	3	0	0	0	0.19099	2	8216	8216;8227		88.177	21.28	1	270100			256	4677	203	203	320;321	320					-1.4075880926611717E-05
AEFKEAFSLF	10	Unmodified	_AEFKEAFSLF_					0	0	0		ENST00000597868.5_1_19:47104691-47111872:+|nuORF;ENST00000556757.5_1_14:90863574-90867886:+|nuORF;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;ENSG00000198668|ENST00000356978|CALM1;ENSG00000160014|ENST00000291295|CALM3;ENSG00000143933|ENST00000272298|CALM2	ENST00000597868.5_1_19:47104691-47111872:+|nuORF	ENST00000597868.5_1_19:47104691-47111872:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	594.8012084960938	2	594.800414	1187.58628	-1.1197	-0.00066598	1.2999	0.0007732	0.18027	0.00010722	594.8011834611337	81.271	0.85636	81.329	80.953	81.809	0.057816					37	19	3	0	0	0	0.51401	1	8087	8087		54.722	7.065	1	248920			257	4677	203	203	322	322					-1.4075880926611717E-05
AEFKEAFSLF	10	Unmodified	_AEFKEAFSLF_					0	0	0		ENST00000597868.5_1_19:47104691-47111872:+|nuORF;ENST00000556757.5_1_14:90863574-90867886:+|nuORF;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;ENSG00000198668|ENST00000356978|CALM1;ENSG00000160014|ENST00000291295|CALM3;ENSG00000143933|ENST00000272298|CALM2	ENST00000597868.5_1_19:47104691-47111872:+|nuORF	ENST00000597868.5_1_19:47104691-47111872:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.80029296875	2	594.800414	1187.58628	-0.19441	-0.00011564	-0.66413	-0.00039502	-0.85854	-0.00051066	594.8005789266958	80.772	0.61922	81.194	80.891	81.51	0.4215					54	14	5	0	0	0	0.23224	1	9287	9287		80.455	18.347	1	1005600			258	4677	203	203	323	323					-1.4075880926611717E-05
AEFKEAFSLF	10	Unmodified	_AEFKEAFSLF_					0	0	0		ENST00000597868.5_1_19:47104691-47111872:+|nuORF;ENST00000556757.5_1_14:90863574-90867886:+|nuORF;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;ENSG00000198668|ENST00000356978|CALM1;ENSG00000160014|ENST00000291295|CALM3;ENSG00000143933|ENST00000272298|CALM2	ENST00000597868.5_1_19:47104691-47111872:+|nuORF	ENST00000597868.5_1_19:47104691-47111872:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.8005981445312	2	594.800414	1187.58628	-0.10444	-6.2118E-05	-1.0551	-0.00062757	-1.1595	-0.00068969	594.80039635465	80.689	0.82533	81.215	80.822	81.647	0.52676					62	19	5	0	0	0	0.14207	2	9305	9295;9305		96.034	13.729	1	965810			259	4677	203	203	324;325	325					-1.4075880926611717E-05
AEFNGVGAAII	11	Unmodified	_AEFNGVGAAII_					0	0	0			REV__ENST00000420064.1_1_3:193296708-193296948:-|nuORF	REV__ENST00000420064.1_1_3:193296708-193296948:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.3123779296875	2	531.284931	1060.55531	1.6135	0.00085721	0.43619	0.00023174	2.0496	0.0010889	531.2862376994791	92.073	0.59514	92.52	92.137	92.733	0.44661					29	13	4	0	0	0	0.1725	1	10887	10887		27.882	0	1	146870	+		260	26483	204	204	326	326					0.027454390976799914
AEFVDKGYIF	10	Unmodified	_AEFVDKGYIF_					0	0	0			REV__nc|ENSG00000158290|Q13620-3|CUL4B	REV__nc|ENSG00000158290|Q13620-3|CUL4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	594.7999267578125	2	594.800414	1187.58628	-0.59855	-0.00035602	0.59437	0.00035353	-0.0041893	-2.4918E-06	594.8007596638064	81.346	0.67841	81.41	81.098	81.777	0.064392					33	15	3	0	0	0	0.49268	1	7997	7997		56.434	3.4971	1	240830	+		261	20599	205	205	327	327					-1.4075880926611717E-05
AEFVPTLFPF	10	Unmodified	_AEFVPTLFPF_					0	0	0			REV__nc|ENSG00000021461|Q9HB55-6|CYP3A43	REV__nc|ENSG00000021461|Q9HB55-6|CYP3A43	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.3020629882812	2	584.307875	1166.6012	-0.544	-0.00031786	-0.73521	-0.00042959	-1.2792	-0.00074745	584.3073834110404	50.679	0.90636	51.127	50.515	51.421	0.44761					54	21	3	0	0	0	0.71042	1	5025	5025		44.117	3.3386	1	629960	+		262	16240	206	206	328	328					0.024560842799019156
AEGEARKVPAL	11	Unmodified	_AEGEARKVPAL_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.822021484375	2	570.822212	1139.62987	-0.44856	-0.00025605	4.3073	0.0024587	3.8587	0.0022026	570.8243844075674	61.574	0.9001	61.59	61.334	62.234	0.015724					68	38	2	0	0	0	0.638	1	5385	5385		40.058	2.2467	1	801440	+		263	20085	207	207	329	329					0.06564201909031908
AEGEKHLIY	9	Unmodified	_AEGEKHLIY_					0	0	0			REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1	REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2791137695312	2	530.277106	1058.53966	0.60487	0.00032075	3.4845	0.0018478	4.0894	0.0021685	530.2794405918029	59.156	1.3576	59.126	58.133	59.49	-0.030888					75	39	3	0	0	0	0.14115	1	5525	5525		85.359	0	1	335700	+		264	15946	208	208	330	330					0.01273152580643
AEGEVVQVRW	10	Unmodified	_AEGEVVQVRW_					0	0	0		ENSG00000066135|ENST00000372396|KDM4A;nc|ENSG00000066135|O75164-2|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	586.8067016601562	2	586.806562	1171.59857	-0.73985	-0.00043415	0.37196	0.00021827	-0.36789	-0.00021588	586.8067948898159	59.524	0.52712	59.51	59.225	59.753	-0.013729					34	13	3	0	0	0	0.42897	1	5471	5471		61.691	23.88	1	125680			265	1151	209	209	331	331					0.019636288749325104
AEGEVVQVRW	10	Unmodified	_AEGEVVQVRW_					0	0	0		ENSG00000066135|ENST00000372396|KDM4A;nc|ENSG00000066135|O75164-2|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	586.8060913085938	2	586.806562	1171.59857	0.6016	0.00035302	-0.74783	-0.00043883	-0.14623	-8.5811E-05	586.8059358717392	59.396	0.646	59.365	59.078	59.724	-0.030884					24	15	2	0	0	0	0.2953	2	5568	5568;5580		72.879	14.633	1	142270			266	1151	209	209	332;333	332					0.019636288749325104
AEGEVVQVRW	10	Unmodified	_AEGEVVQVRW_					0	0	0		ENSG00000066135|ENST00000372396|KDM4A;nc|ENSG00000066135|O75164-2|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	586.806562	1171.59857	-2.0898	-0.0012263	1.9329	0.0011343	-0.15684	-9.2035E-05	586.8076032418584	59.354	0.51287	59.387	59.09	59.603	0.033203	-0.033502	0.0016931	NaN	72.879	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146020			267	1151	209	209							0.019636288749325104
AEGMAYMERM	10	Oxidation (M)	_AEGM(Oxidation (M))AYMERM_		AEGM(1)AYMERM		AEGM(41)AYM(-41)ERM(-50)	0	0	1		ENSG00000000938|ENST00000374005|FGR	ENSG00000000938|ENST00000374005|FGR	ENSG00000000938|ENST00000374005|FGR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	602.7411499023438	2	602.743402	1203.47225	-0.44083	-0.0002657	-2.0614	-0.0012425	-2.5022	-0.0015082	602.7420137971703	85.061	0.92115	85.061	84.569	85.49	0					45	20	3	0	0	0	0.57924	1	8047	8047		51.193	7.0759	3	292590			268	646	210	210	334	334		8			-0.12134705008520541
AEGTEEGARW	10	Unmodified	_AEGTEEGARW_					0	0	0		nc|ENSG00000135506|Q13438-8|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-4|OS9;ENSG00000135506|ENST00000315970|OS9	nc|ENSG00000135506|Q13438-8|OS9	nc|ENSG00000135506|Q13438-8|OS9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.2485961914062	2	553.249077	1104.4836	-0.68731	-0.00038025	0.57153	0.0003162	-0.11578	-6.4055E-05	553.2492219230396	36.217	0.94708	36.198	35.784	36.731	-0.018673					48	20	4	0	0	0	0.0085745	4	2296	2284;2296;2308;2321		132.76	53.307	1	674130			269	4030	211	211	335;336;337;338	336					-0.06446100326866144
AEGTEEGARW	10	Unmodified	_AEGTEEGARW_					0	0	0		nc|ENSG00000135506|Q13438-8|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-4|OS9;ENSG00000135506|ENST00000315970|OS9	nc|ENSG00000135506|Q13438-8|OS9	nc|ENSG00000135506|Q13438-8|OS9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.248779296875	2	553.249077	1104.4836	-0.23711	-0.00013118	0.20635	0.00011416	-0.030766	-1.7021E-05	553.2490708217814	36.264	1.0362	36.208	35.834	36.87	-0.055901					55	22	4	0	0	0	1.223E-11	4	2398	2387;2398;2410;2422		164.46	84.966	1	806210			270	4030	211	211	339;340;341;342	340					-0.06446100326866144
AEGTEEGARW	10	Unmodified	_AEGTEEGARW_					0	0	0		nc|ENSG00000135506|Q13438-8|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-4|OS9;ENSG00000135506|ENST00000315970|OS9	nc|ENSG00000135506|Q13438-8|OS9	nc|ENSG00000135506|Q13438-8|OS9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.2490844726562	2	553.249077	1104.4836	-0.65529	-0.00036254	0.50375	0.0002787	-0.15154	-8.3839E-05	553.2492336121851	36.193	1.0396	36.202	35.797	36.837	0.0092773					55	22	4	0	0	0	7.4855E-07	5	2335	2313;2323;2335;2347;2360		150.36	76.197	1	732670			271	4030	211	211	343;344;345;346;347	345					-0.06446100326866144
AEHFSPFRVQ	10	Unmodified	_AEHFSPFRVQ_					0	0	0		ENSG00000145604|ENST00000274255|SKP2;nc|ENSG00000145604|Q13309-2|SKP2	ENSG00000145604|ENST00000274255|SKP2	ENSG00000145604|ENST00000274255|SKP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.7851257324219	3	406.540245	1216.59891	-1.9155	-0.00077872	-1.1765	-0.00047828	-3.0919	-0.001257	406.5396555184645	32.946	0.43771	32.998	32.734	33.172	0.052456					25	19	2	0	0	0	0.37624	1	1545	1545		32.751	18.057	1	67692			272	4779	212	212	348	348					-0.0007295140519545384
AEHFSPFRVQ	10	Unmodified	_AEHFSPFRVQ_					0	0	0		ENSG00000145604|ENST00000274255|SKP2;nc|ENSG00000145604|Q13309-2|SKP2	ENSG00000145604|ENST00000274255|SKP2	ENSG00000145604|ENST00000274255|SKP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78521728515625	3	406.540245	1216.59891	0.020481	8.3265E-06	-3.2607	-0.0013256	-3.2402	-0.0013173	406.5389117875168	30.766	0.9952	30.77	30.491	31.486	0.0037212					46	22	4	0	0	0	0.37624	1	2089	2089		25.126	1.7481	1	1044400			273	4779	212	212	349	349					-0.0007295140519545384
AEHQQRML	8	Unmodified	_AEHQQRML_					0	0	0			REV__ENSG00000101745|ENST00000262126|ANKRD12;REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	REV__ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.75335693359375	2	506.753276	1011.492	1.4444	0.00073194	-2.1253	-0.001077	-0.68094	-0.00034507	506.75204042720367	98.5	2.1767	98.861	97.949	100.13	0.36137					121	53	5	0	0	0	0.9159	1	11867	11867		44.531	2.1349	1	5114500	+		274	17298;21391	213	213	350	350					-0.013288248912317613
AEHSQVAELQ	10	Unmodified	_AEHSQVAELQ_					0	0	0		nc|ENSG00000137802|O60336-2|MAPKBP1;nc|ENSG00000137802|O60336-3|MAPKBP1;ENSG00000137802|ENST00000457542|MAPKBP1;nc|ENSG00000137802|O60336|MAPKBP1;ENST00000515164.1_1_15:42103000-42104860:+|nuORF;nc|ENSG00000137802|O60336-5|MAPKBP1;ENST00000502292.5_1_15:42067473-42104860:+|nuORF	nc|ENSG00000137802|O60336-2|MAPKBP1	nc|ENSG00000137802|O60336-2|MAPKBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.2744750976562	2	556.272552	1110.53055	-0.13237	-7.3632E-05	0.32621	0.00018146	0.19384	0.00010783	556.2725648541509	75.526	1.4716	76.09	75.208	76.68	0.56458					64	35	3	0	0	0	0.86106	1	8568	8568		33.922	1.9668	1	518410			275	4235	214	214	351	351					-0.020292407757096953
AEIADLIPQ	9	Unmodified	_AEIADLIPQ_					0	0	0			REV__ENSG00000101109|ENST00000372806|STK4	REV__ENSG00000101109|ENST00000372806|STK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.265625	2	485.266207	968.517862	-2.0518	-0.00099565	0.052784	2.5614E-05	-1.999	-0.00097004	485.2661299118407	43.069	1.5352	43.843	43.54	45.075	0.7738					84	37	4	0	0	0	0.47272	1	3883	3883		53.351	0	1	9449200	+		276	17242	215	215	352	352					0.032343478320512986
AEIAFTLLL	9	Unmodified	_AEIAFTLLL_					0	0	0			REV__nc|ENSG00000197548|O95352-3|ATG7	REV__nc|ENSG00000197548|O95352-3|ATG7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.7967224121094	2	495.797143	989.579734	1.3672	0.00067785	-1.0952	-0.000543	0.27199	0.00013485	495.79626399989235	105.14	1.0402	105.29	104.99	106.03	0.15583					65	26	4	0	0	0	0.39977	1	12820	12820		57.811	2.3071	1	604160	+		277	30138	216	216	353	353					0.08452699251199647
AEIDARNDSF	10	Unmodified	_AEIDARNDSF_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;ENST00000496323.1_1_2:54880712-54887220:+|nuORF	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.7632446289062	2	569.262185	1136.50982	-0.76928	-0.00043792	-1.2107	-0.00068921	-1.98	-0.0011271	569.2622708104982	43.04	0.8723	43.01	42.571	43.443	-0.029461					57	20	4	0	0	0	0.11784	2	3268	3268;3279		99.013	33.115	1	340890			278	2832	217	217	354;355	354					-0.05297831155394306
AEIDARNDSF	10	Unmodified	_AEIDARNDSF_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;ENST00000496323.1_1_2:54880712-54887220:+|nuORF	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.2621459960938	2	569.262185	1136.50982	-0.99519	-0.00056652	-1.1113	-0.00063263	-2.1065	-0.0011992	569.7625900096699	42.995	0.88801	42.959	42.56	43.448	-0.035816					59	20	4	0	0	0	0.0013146	3	3362	3349;3362;3372		138.06	47.693	1	332400			279	2832	217	217	356;357;358	357					-0.05297831155394306
AEIDARNDSF	10	Unmodified	_AEIDARNDSF_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;ENST00000496323.1_1_2:54880712-54887220:+|nuORF	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.7623291015625	2	569.262185	1136.50982	-0.078089	-4.4453E-05	-2.1903	-0.0012469	-2.2684	-0.0012913	569.2617381424325	43.014	0.88065	43.014	42.577	43.458	0.00016785					56	20	4	0	0	0	0.081562	3	3288	3288;3298;3310		104.01	40.48	1	331900			280	2832	217	217	359;360;361	359					-0.05297831155394306
AEIDARNDSF	10	Unmodified	_AEIDARNDSF_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;ENST00000496323.1_1_2:54880712-54887220:+|nuORF	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	569.262185	1136.50982	-1.3142	-0.00074812	-1.2276	-0.00069881	-2.5418	-0.0014469	569.7612958629912	42.741	0.41331	43.174	43.006	43.419	0.4334	0.087135	0.00022979	NaN	138.06	14	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	257900			281	2832	217	217							-0.05297831155394306
AEIDARNDSF	10	Unmodified	_AEIDARNDSF_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;ENST00000496323.1_1_2:54880712-54887220:+|nuORF	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	569.262185	1136.50982	-1.0167	-0.00057876	-0.91459	-0.00052064	-1.9313	-0.0010994	569.2622589492787	42.58	0.37031	43.278	43.052	43.422	0.69754	0.19063	0.00058612	NaN	138.06	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	295450			282	2832	217	217							-0.05297831155394306
AEIDILKK	8	Unmodified	_AEIDILKK_					0	0	0			REV__ENST00000488636.5_1_2:201399822-201407388:+|nuORF	REV__ENST00000488636.5_1_2:201399822-201407388:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.2863464355469	2	465.286943	928.559333	-1.3462	-0.00062637	1.5269	0.00071045	0.18069	8.4074E-05	465.28751849052463	77.21	0.82004	77.301	76.982	77.802	0.091438					97	41	3	0	0	0	0.37624	1	7217	7217		96.19	3.0472	1	1491000	+		283	20930	218	218	362	362					0.09219528591370363
AEIDLLLIS	9	Unmodified	_AEIDLLLIS_					0	0	0		ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7916259765625	2	493.792058	985.569563	-1.0082	-0.00049786	0.99365	0.00049066	-0.014583	-7.2009E-06	493.79239689427686	91.796	2.3688	92.259	91.807	94.176	0.46249					119	55	4	0	0	0	0.28163	1	10947	10947		66.429	5.4573	1	3049900			284	3056	219	219	363	363					0.07620091525961925
AEIEALRR	8	Unmodified	_AEIEALRR_					0	0	0			REV__nc|ENSG00000164741|Q96QB1-6|DLC1	REV__nc|ENSG00000164741|Q96QB1-6|DLC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2784118652344	2	479.277441	956.540328	0.75121	0.00036004	-0.06938	-3.3252E-05	0.68183	0.00032678	479.2773206113693	97.297	1.0964	97.46	96.922	98.018	0.16317					63	25	3	0	0	0	0.89043	1	10043	10043		35.618	2.8059	1	731730	+		285	29993	220	220	364	364					0.06031992020314192
AEIEIVKDL	9	Unmodified	_AEIEIVKDL_					0	0	0		nc|ENSG00000122884|P13674-3|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1;ENSG00000122884|ENST00000394890|P4HA1	nc|ENSG00000122884|P13674-3|P4HA1	nc|ENSG00000122884|P13674-3|P4HA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	515.2957763671875	2	515.294965	1028.57538	-0.050738	-2.6145E-05	0.022192	1.1435E-05	-0.028546	-1.471E-05	515.2948898144718	64.886	0.6669	64.891	64.574	65.24	0.0046997					32	18	2	0	0	0	0.085559	4	6088	6072;6079;6088;6098		96.034	18.716	1	348540			286	3252	221	221	365;366;367;368	367					0.06223190037621862
AEIEIVKDL	9	Unmodified	_AEIEIVKDL_					0	0	0		nc|ENSG00000122884|P13674-3|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1;ENSG00000122884|ENST00000394890|P4HA1	nc|ENSG00000122884|P13674-3|P4HA1	nc|ENSG00000122884|P13674-3|P4HA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.29541015625	2	515.294965	1028.57538	0.039155	2.0176E-05	-0.13997	-7.2128E-05	-0.10082	-5.1952E-05	515.2947822520104	64.702	0.70649	64.667	64.299	65.005	-0.034798					30	17	2	0	0	0	0.11874	2	6187	6187;6198		89.029	17.151	1	425860			287	3252	221	221	369;370	369					0.06223190037621862
AEIEIVKDL	9	Unmodified	_AEIEIVKDL_					0	0	0		nc|ENSG00000122884|P13674-3|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1;ENSG00000122884|ENST00000394890|P4HA1	nc|ENSG00000122884|P13674-3|P4HA1	nc|ENSG00000122884|P13674-3|P4HA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.2960205078125	2	515.294965	1028.57538	-0.7707	-0.00039714	0.77864	0.00040123	0.0079393	4.0911E-06	515.2952430105825	64.637	0.76382	64.664	64.376	65.14	0.027138					32	20	2	0	0	0	0.074461	4	6092	6092;6100;6112;6125		99.013	17.562	1	453190			288	3252	221	221	371;372;373;374	371					0.06223190037621862
AEIEIVKEEF	10	Unmodified	_AEIEIVKEEF_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	603.8182373046875	2	603.816261	1205.61797	0.12559	7.5835E-05	-0.18719	-0.00011303	-0.061595	-3.7192E-05	603.8160096845654	65.137	0.40201	65.102	64.85	65.252	-0.03479					26	14	2	0	0	0	0.71918	1	6245	6245		43.651	5.8393	1	143340			289	14756	222	222	375	375					0.023385403751944978
AEIEIVKEEF	10	Unmodified	_AEIEIVKEEF_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	603.8167724609375	2	603.816261	1205.61797	-1.6872	-0.0010188	1.6811	0.001015	-0.0061577	-3.7181E-06	603.817179876448	65.047	0.38466	65.074	64.88	65.264	0.027138					29	13	3	0	0	0	0.47072	2	6162	6162;6171		58.246	17.468	1	95739			290	14756	222	222	376;377	376					0.023385403751944978
AEIEKLGQKY	10	Unmodified	_AEIEKLGQKY_					0	0	0		ENSG00000119616|ENST00000341162|FCF1	ENSG00000119616|ENST00000341162|FCF1	ENSG00000119616|ENST00000341162|FCF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.8232421875	2	589.824421	1177.63429	-0.29188	-0.00017216	-0.020319	-1.1985E-05	-0.3122	-0.00018415	589.8241207735084	36.7	0.53501	36.647	36.426	36.961	-0.053555					20	11	3	0	0	0	0.47091	1	2468	2468		58.23	20.418	1	65289			291	3079	223	223	378	378					0.052576663319541694
AEIEKLGQKY	10	Unmodified	_AEIEKLGQKY_					0	0	0		ENSG00000119616|ENST00000341162|FCF1	ENSG00000119616|ENST00000341162|FCF1	ENSG00000119616|ENST00000341162|FCF1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	589.824421	1177.63429	-0.57229	-0.00033755	0.7745	0.00045682	0.20221	0.00011927	589.8247392400589	36.702	0.44521	36.683	36.42	36.866	-0.018677	0.026524	-0.0002014	NaN	58.23	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52101			292	3079	223	223							0.052576663319541694
AEIGIKMITG	10	Unmodified	_AEIGIKMITG_					0	0	0			REV__ENST00000394321.9_1_19:7591427-7598678:+|nuORF;REV__ENSG00000090674|ENST00000264079|MCOLN1	REV__ENSG00000090674|ENST00000264079|MCOLN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.79345703125	2	516.791535	1031.56852	0.82179	0.0004247	2.9641	0.0015318	3.7859	0.0019565	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.8545	1	9141	9141		36.447	2.2742	1	858640	+		293	26078;16995	224	224	379	379					0.053995538853769176
AEILLLKE	8	Unmodified	_AEILLLKE_					0	0	0		ENSG00000121621|ENST00000263181|KIF18A;ENST00000533466.1_1_11:28098218-28119398:-|nuORF	ENSG00000121621|ENST00000263181|KIF18A	ENSG00000121621|ENST00000263181|KIF18A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.789306640625	2	464.789318	927.564084	-0.072724	-3.3801E-05	3.0915	0.0014369	3.0188	0.0014031	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.88185	1	2044	2044		32.812	3.6629	1	297050			294	3191	225	225	380	380					0.09740412734140591
AEILQANDLL	10	Unmodified	_AEILQANDLL_					0	0	0		ENSG00000103365|ENST00000309859|GGA2	ENSG00000103365|ENST00000309859|GGA2	ENSG00000103365|ENST00000309859|GGA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3038330078125	2	550.303321	1098.59209	-0.11602	-6.3845E-05	-0.028758	-1.5826E-05	-0.14478	-7.967E-05	550.3032368896779	80.497	0.71326	81.024	80.653	81.366	0.52677					37	16	3	0	0	0	0.60066	1	9272	9272		50.034	5.6563	1	385810			295	2079	226	226	381	381					0.04673690923573304
AEILSAILV	9	Unmodified	_AEILSAILV_					0	0	0		ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7911376953125	2	464.789318	927.564084	0.090365	4.2E-05	2.7326	0.0012701	2.823	0.0013121	464.7905453409174	36.857	1.3586	36.797	35.976	37.335	-0.060333					62	38	2	0	0	0	0.74721	1	2039	2039		37.159	5.2042	1	232790			296	7672	227	227	382	382					0.09740412734129222
AEIQNVEGQNL	11	Unmodified	_AEIQNVEGQNL_					0	0	0		nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-6|SP140;nc|ENSG00000079263|Q13342-5|SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000473711.1_1_2:231090559-231102095:+|nuORF;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-4|SP140	nc|ENSG00000079263|Q13342-2|SP140	nc|ENSG00000079263|Q13342-2|SP140	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.359375	2	607.804217	1213.59388	-0.16212	-9.8536E-05	-0.043837	-2.6644E-05	-0.20596	-0.00012518	607.8040271453953	53.701	0.54488	54.285	53.998	54.543	0.58474					24	12	3	0	0	0	0.17246	1	5439	5439		37.508	20.143	1	415460			297	1413	228	228	383	383					-0.004373000584564579
AEIQNVEGQNL	11	Unmodified	_AEIQNVEGQNL_					0	0	0		nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-6|SP140;nc|ENSG00000079263|Q13342-5|SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000473711.1_1_2:231090559-231102095:+|nuORF;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-4|SP140	nc|ENSG00000079263|Q13342-2|SP140	nc|ENSG00000079263|Q13342-2|SP140	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	607.804217	1213.59388	0.85506	0.00051971	-1.6758	-0.0010186	-0.82077	-0.00049887	607.8036019266149	53.916	0.41659	54.33	54.036	54.453	0.4139	0.022155	-0.00073477	NaN	50.034	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	311720			298	1413	228	228							-0.004373000584564579
AEIRHVLVTL	10	Unmodified	_AEIRHVLVTL_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.850341796875	2	575.850773	1149.68699	-0.47723	-0.00027482	0.10039	5.781E-05	-0.37684	-0.00021701	575.8507043072195	51.084	0.74531	51.519	51.161	51.906	0.43505					52	17	4	0	0	0	0.20077	4	5051	5040;5051;5063;5075		85.862	28.193	1	2729900			299	1704;14801	229	229	384;385;386;387	385					0.11813669185426079
AEIRHVLVTL	10	Unmodified	_AEIRHVLVTL_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6;nc|ENSG00000092841|P60660-2|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8506469726562	2	575.850773	1149.68699	0.5863	0.00033762	-0.86387	-0.00049746	-0.27756	-0.00015984	575.8501292195979	50.883	0.69606	51.635	51.325	52.021	0.75174					58	16	6	0	0	0	0.11784	4	5053	5030;5041;5053;5066		99.013	32.153	1	2721300			300	1704;14801	229	229	388;389;390;391	390					0.11813669185426079
AEIRSLVTW	9	Unmodified	_AEIRSLVTW_					0	0	0		ENSG00000119917|ENST00000371818|IFIT3;ENSG00000119922|ENST00000371826|IFIT2;chr10:89285264-89292289|24|16.62|0.05|8.28|+|ENST00000638108|IFIT2,IFIT2	ENSG00000119917|ENST00000371818|IFIT3	ENSG00000119917|ENST00000371818|IFIT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	537.8004760742188	2	537.800749	1073.58694	-0.14262	-7.67E-05	0.068809	3.7006E-05	-0.073809	-3.9695E-05	537.800688240349	67.702	0.7774	67.724	67.401	68.179	0.021591					80	34	3	0	0	0	0.17881	3	6365	6347;6355;6365		78.264	20.034	1	826370			301	3103	230	230	392;393;394	394					0.053094318516286876
AEIRSLVTW	9	Unmodified	_AEIRSLVTW_					0	0	0		ENSG00000119917|ENST00000371818|IFIT3;ENSG00000119922|ENST00000371826|IFIT2;chr10:89285264-89292289|24|16.62|0.05|8.28|+|ENST00000638108|IFIT2,IFIT2	ENSG00000119917|ENST00000371818|IFIT3	ENSG00000119917|ENST00000371818|IFIT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.8004760742188	2	537.800749	1073.58694	0.19844	0.00010672	-0.34038	-0.00018306	-0.14194	-7.6335E-05	537.8004566578544	67.651	0.92792	67.615	67.289	68.217	-0.035698					94	36	4	0	0	0	0.15708	2	6483	6483;6491		82.75	27.974	1	839650			302	3103	230	230	395;396	395					0.053094318516286876
AEIRSLVTW	9	Unmodified	_AEIRSLVTW_					0	0	0		ENSG00000119917|ENST00000371818|IFIT3;ENSG00000119922|ENST00000371826|IFIT2;chr10:89285264-89292289|24|16.62|0.05|8.28|+|ENST00000638108|IFIT2,IFIT2	ENSG00000119917|ENST00000371818|IFIT3	ENSG00000119917|ENST00000371818|IFIT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.8004760742188	2	537.800749	1073.58694	-0.13878	-7.4637E-05	-0.022156	-1.1916E-05	-0.16094	-8.6552E-05	537.80065783512	67.517	0.8688	67.548	67.247	68.116	0.030571					90	33	4	0	0	0	0.076066	3	6408	6400;6408;6417		98.582	34.375	1	823720			303	3103	230	230	397;398;399	398					0.053094318516286876
AEISDDEP	8	Unmodified	_AEISDDEP_					0	0	0			REV__nc|ENSG00000140299|Q12982-2|BNIP2	REV__nc|ENSG00000140299|Q12982-2|BNIP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.570068359375	2	438.18508	874.355607	0.50958	0.00022329	-0.30601	-0.00013409	0.20357	8.9202E-05	438.1847441536938	34.654	0.68166	34.66	34.293	34.975	0.0063896					28	16	3	0	0	0	0.4196	1	2143	2143		11.511	0	1	32213	+		304	29888	231	231	400	400					-0.08659660640751099
AEISLAIINR	10	Unmodified	_AEISLAIINR_					0	0	0			REV__nc|ENSG00000165194|Q8TAB3-3|PCDH19	REV__nc|ENSG00000165194|Q8TAB3-3|PCDH19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.3270263671875	2	550.327131	1098.63971	-0.59914	-0.00032972	0.77743	0.00042784	0.1783	9.8121E-05	550.3275633204873	100.31	1.098	100.35	99.837	100.93	0.041107					67	24	4	0	0	0	0.8608	2	10685	10685;10697		34.173	2.4355	1	446840	+		305	15940	232	232	401;402	401					0.09433389914420331
AEISSPRASF	10	Unmodified	_AEISSPRASF_					0	0	0			REV__nc|ENSG00000131373|Q9UJ83-2|HACL1	REV__nc|ENSG00000131373|Q9UJ83-2|HACL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.7706909179688	2	532.772188	1063.52982	-0.12545	-6.6837E-05	-0.32248	-0.00017181	-0.44793	-0.00023865	532.7719286660782	48.478	0.60995	48.453	48.139	48.749	-0.025112					25	13	2	0	0	0	0.3985	1	4113	4113		64.207	2.0999	1	245730	+		306	18945	233	233	403	403					0.0005996457523451681
AEITDKLGL	9	Unmodified	_AEITDKLGL_					0	0	0		ENST00000444561.2_1_17:43710417-43713807:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;ENSG00000143761|ENST00000272102|ARF1;ENSG00000134287|ENST00000256682|ARF3	ENST00000444561.2_1_17:43710417-43713807:+|nuORF	ENST00000444561.2_1_17:43710417-43713807:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2757568359375	2	480.274032	958.533512	-0.29821	-0.00014322	0.54437	0.00026145	0.24616	0.00011822	480.2741482358005	57.116	0.73643	57.512	57.16	57.896	0.39672					46	17	3	0	0	0	0.23176	1	5913	5913		70.816	4.3869	1	1979000			307	3925	234	234	404	404					0.05258634349092972
AEITDKLGL	9	Unmodified	_AEITDKLGL_					0	0	0		ENST00000444561.2_1_17:43710417-43713807:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;ENSG00000143761|ENST00000272102|ARF1;ENSG00000134287|ENST00000256682|ARF3	ENST00000444561.2_1_17:43710417-43713807:+|nuORF	ENST00000444561.2_1_17:43710417-43713807:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2747802734375	2	480.274032	958.533512	-0.14768	-7.0928E-05	0.4279	0.00020551	0.28022	0.00013458	480.27414686344235	56.98	0.78465	57.536	57.181	57.965	0.55512					49	18	3	0	0	0	0.026116	2	5922	5922;5935		120.87	21.493	1	1958100			308	3925	234	234	405;406	405					0.05258634349092972
AEIVEGENHTY	11	Unmodified	_AEIVEGENHTY_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;ENST00000474358.5_1_X:153580213-153581146:-|nuORF	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	631.289306640625	2	631.288399	1260.56225	0.10035	6.3349E-05	-0.15878	-0.00010024	-0.058433	-3.6888E-05	631.288145236583	39.6	0.56727	39.569	39.322	39.889	-0.030273					34	13	3	0	0	0	0.093139	3	2764	2764;2775;2786		94.409	36.179	1	244080			309	8114	235	235	407;408;409	407					-0.05761292812417196
AEIVEGENHTY	11	Unmodified	_AEIVEGENHTY_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;ENST00000474358.5_1_X:153580213-153581146:-|nuORF	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	631.287353515625	2	631.288399	1260.56225	-1.2049	-0.00076065	1.2333	0.00077855	0.028348	1.7896E-05	631.2889677342879	39.448	0.88679	39.401	39.118	40.004	-0.047005					42	20	4	0	0	0	0.097682	2	2837	2837;2847		93.598	40.661	1	218160			310	8114	235	235	410;411	410					-0.05761292812417196
AEIVEGENHTY	11	Unmodified	_AEIVEGENHTY_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;ENST00000474358.5_1_X:153580213-153581146:-|nuORF	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	631.28857421875	2	631.288399	1260.56225	-1.1071	-0.00069887	1.1566	0.00073014	0.049529	3.1267E-05	631.2890025426797	39.42	0.67448	39.431	39.143	39.817	0.011173					38	15	3	0	0	0	0.080511	3	2768	2757;2768;2780		96.665	27.037	1	276190			311	8114	235	235	412;413;414	413					-0.05761292812417196
AEKAYHEQL	9	Unmodified	_AEKAYHEQL_					0	0	0		ENST00000437364.2_1_1:47358067-47358181:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;nc|ENSG00000127824|P68366-2|TUBA4A;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000198033|ENST00000400113|TUBA3C;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000123416|ENST00000336023|TUBA1B	ENST00000437364.2_1_1:47358067-47358181:+|nuORF	ENST00000437364.2_1_1:47358067-47358181:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.7720336914062	2	544.772188	1087.52982	-0.54836	-0.00029873	0.30173	0.00016437	-0.24663	-0.00013436	544.7722169969999	26.229	0.57865	25.972	25.726	26.304	-0.2572					31	12	3	0	0	0	0.58063	1	1417	1417		47.96	5.0953	1	385930			312	1346	236	236	415	415					-0.010440354247748473
AEKCSQSNN	9	Unmodified	_AEKCSQSNN_					0	0	0		nc|ENSG00000159842|Q12979-4|ABR;nc|ENSG00000159842|Q12979-2|ABR;ENSG00000159842|ENST00000302538|ABR;ENST00000573325.1_1_17:986639-994967:-|nuORF;ENST00000576964.5_1_17:953371-986816:-|nuORF	nc|ENSG00000159842|Q12979-4|ABR	nc|ENSG00000159842|Q12979-4|ABR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.70672607421875	2	490.708731	979.402908	-0.22594	-0.00011087	-2.8006	-0.0013743	-3.0266	-0.0014852	490.70696263856706	28.177	0.65317	28.137	27.878	28.532	-0.039907					21	14	2	0	0	0	0.67345	1	1416	1416		42.396	10.866	1	76656			313	5550	237	237	416	416					-0.08761704641403867
AEKGPTRNAL	10	Unmodified	_AEKGPTRNAL_					0	0	0			REV__ENSG00000166226|ENST00000299300|CCT2	REV__ENSG00000166226|ENST00000299300|CCT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.7931518554688	2	528.793455	1055.57236	-0.29217	-0.0001545	0.15811	8.361E-05	-0.13405	-7.0887E-05	528.7934265407783	36.279	1.2558	36.223	35.879	37.135	-0.055904					72	27	4	0	0	0	0.18173	1	2406	2406		90.37	13.052	1	1444600	+		314	21268	238	238	417	417					0.046793597034593404
AEKGPTRNAL	10	Unmodified	_AEKGPTRNAL_					0	0	0			REV__ENSG00000166226|ENST00000299300|CCT2	REV__ENSG00000166226|ENST00000299300|CCT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7933349609375	2	528.793455	1055.57236	1.0935	0.00057822	-1.1708	-0.00061909	-0.077289	-4.087E-05	528.7928379036528	35.778	2.2829	36.025	35.438	37.721	0.24769					158	56	6	0	0	0	0.18173	1	2750	2750		90.37	12.106	1	16698000	+		315	21268	238	238	418	418					0.046793597034593404
AEKHKTNLL	9	Unmodified	_AEKHKTNLL_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.7902221679688	2	527.306198	1052.59784	0.75273	0.00039692	-1.7772	-0.00093712	-1.0244	-0.0005402	527.3054859582556	65.976	1.4433	66.362	65.959	67.402	0.38581					53	39	2	0	0	0	0.20789	1	7286	7286		27.882	4.8398	1	847580	+		316	22651	239	239	419	419					0.07364834225904815
AEKILQEPLLR	11	Unmodified	_AEKILQEPLLR_					0	0	0			REV__ENSG00000155561|ENST00000285968|NUP205	REV__ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2652893066406	3	437.266122	1308.77654	0.94785	0.00041446	4.1396	0.0018101	5.0875	0.0022246	437.6021157281718	55.109	0.32409	55.136	54.92	55.244	0.027142					11	7	2	0	0	0	0.69687	1	4924	4924		32.034	8.6562	1	286510	+		317	20433	240	240	420	420					0.13449879074119053
AEKKNSILY	9	Unmodified	_AEKKNSILY_					0	0	0			REV__ENST00000486925.1_1_7:87505915-87514494:+|nuORF	REV__ENST00000486925.1_1_7:87505915-87514494:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.8032836914062	2	533.300581	1064.58661	-0.46862	-0.00024992	0.32551	0.00017359	-0.14311	-7.6322E-05	533.3007266349649	31.256	2.7034	31.336	29.971	32.674	0.079834					123	61	4	0	0	0	0.77244	1	2182	2182		32.812	4.9302	1	663570	+		318	16106	241	241	421	421					0.056900121317767116
AEKKRHKQ	8	Unmodified	_AEKKRHKQ_					0	0	0			REV__nc|ENSG00000105278|Q9UPR6-3|ZFR2	REV__nc|ENSG00000105278|Q9UPR6-3|ZFR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.6561279296875	2	512.804157	1023.59376	0.081982	4.2041E-05	2.6268	0.001347	2.7088	0.0013891	512.8052862272275	32.247	0.64687	32.373	32.116	32.763	0.12643					33	14	3	0	0	0	0.4196	1	2217	2217		37.159	5.6293	1	273640	+		319	29756	242	242	422	422					0.08290789522845898
AEKLITQTF	9	Unmodified	_AEKLITQTF_					0	0	0		ENSG00000090273|ENST00000321265|NUDC	ENSG00000090273|ENST00000321265|NUDC	ENSG00000090273|ENST00000321265|NUDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3041381835938	2	525.795132	1049.57571	0.25707	0.00013517	-0.40091	-0.0002108	-0.14384	-7.5629E-05	525.7947510397609	52.758	0.56695	52.776	52.577	53.144	0.017487					23	14	2	0	0	0	0.6107	1	4618	4618		46.457	2.0796	1	111050			320	1640	243	243	423	423					0.05290609757457787
AEKLITQTF	9	Unmodified	_AEKLITQTF_					0	0	0		ENSG00000090273|ENST00000321265|NUDC	ENSG00000090273|ENST00000321265|NUDC	ENSG00000090273|ENST00000321265|NUDC	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	525.795132	1049.57571	0.037756	1.9852E-05	-0.41445	-0.00021792	-0.37669	-0.00019806	525.7947600733609	52.902	0.48309	52.898	52.636	53.12	-0.0033035	0.064747	-0.00015405	NaN	46.457	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101100			321	1640	243	243							0.05290609757457787
AEKLITQTF	9	Unmodified	_AEKLITQTF_					0	0	0		ENSG00000090273|ENST00000321265|NUDC	ENSG00000090273|ENST00000321265|NUDC	ENSG00000090273|ENST00000321265|NUDC	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	525.795132	1049.57571	-0.19153	-0.00010071	0.46792	0.00024603	0.27639	0.00014532	525.7950840880678	52.851	0.74303	52.827	52.459	53.202	-0.023849	-0.006768	0.00077384	NaN	46.457	29	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108920			322	1640	243	243							0.05290609757457787
AEKLKKKRDM	10	Unmodified	_AEKLKKKRDM_					0	0	0			REV__ENSG00000198765|ENST00000369522|SYCP1	REV__ENSG00000198765|ENST00000369522|SYCP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	623.87109375	2	623.86864	1245.72273	-0.25925	-0.00016174	3.0799	0.0019214	2.8206	0.0017597	623.8704556455313	104.73	1.8693	104.71	104.28	106.15	-0.014809					121	44	4	0	0	0	0.86621	1	11293	11293		26.063	2.5407	1	1315900	+		323	23377	244	244	424	424					0.10969383370775176
AEKLKQLPE	9	Unmodified	_AEKLKQLPE_					0	0	0			REV__nc|ENSG00000118900|Q9NPG3-2|UBN1	REV__nc|ENSG00000118900|Q9NPG3-2|UBN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.265869140625	2	528.308406	1054.60226	-0.11178	-5.9055E-05	-0.080386	-4.2468E-05	-0.19217	-0.00010152	528.3082650383384	56.899	1.0873	57.296	56.809	57.896	0.39672					47	25	3	0	0	0	0.20789	1	5882	5882		31.53	0	1	402470	+		324	18331	245	245	425	425					0.07714298648784279
AEKREHEKEVL	11	Unmodified	_AEKREHEKEVL_					0	0	0		ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;ENSG00000117632|ENST00000455785|STMN1;nc|ENSG00000117632|P16949-2|STMN1	ENST00000465604.1_1_1:26227509-26228203:-|nuORF	ENST00000465604.1_1_1:26227509-26228203:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.5807189941406	3	456.580769	1366.72048	-0.023733	-1.0836E-05	-0.19412	-8.8629E-05	-0.21785	-9.9465E-05	456.5805848649042	18.532	0.42102	18.055	17.89	18.311	-0.47694					26	8	4	0	0	0	0.70847	1	408	408		30.139	5.9073	1	286010			325	2993	246	246	426	426					0.0517862616666207
AEKVEIATL	9	Unmodified	_AEKVEIATL_					0	0	0		nc|ENSG00000041357|P25789-2|PSMA4;ENSG00000041357|ENST00000044462|PSMA4	nc|ENSG00000041357|P25789-2|PSMA4	nc|ENSG00000041357|P25789-2|PSMA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.2810363769531	2	487.281857	972.549162	-0.52403	-0.00025535	-0.1203	-5.8621E-05	-0.64434	-0.00031397	487.28172994154585	49.074	0.6479	49.534	49.223	49.871	0.45983					35	15	3	0	0	0	0.039957	2	4778	4766;4778		112.41	27.25	1	1192700			326	931	247	247	427;428	428					0.06178920866148019
AEKVEIATL	9	Unmodified	_AEKVEIATL_					0	0	0		nc|ENSG00000041357|P25789-2|PSMA4;ENSG00000041357|ENST00000044462|PSMA4	nc|ENSG00000041357|P25789-2|PSMA4	nc|ENSG00000041357|P25789-2|PSMA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.2807922363281	2	487.281857	972.549162	0.21852	0.00010648	-0.70151	-0.00034183	-0.48299	-0.00023535	487.28135112194127	48.911	0.60487	49.815	49.529	50.133	0.90424					27	14	3	0	0	0	0.059135	2	4766	4755;4766		104.06	24.344	1	1135100			327	931	247	247	429;430	430					0.06178920866148019
AEKVLRQVN	9	Unmodified	_AEKVLRQVN_					0	0	0			REV__ENSG00000182348|ENST00000333190|ZNF804B	REV__ENSG00000182348|ENST00000333190|ZNF804B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.793212890625	2	528.811648	1055.60874	1.5817	0.00083644	1.6177	0.00085545	3.1994	0.0016919	528.8123559407766	35.727	0.14738	36.168	36.074	36.222	0.44043					5	3	2	0	0	0	0.20789	1	2762	2762		44.117	11.304	1	163190	+		328	22520	248	248	431	431					0.08316236600194316
AEKYPKQLI	9	Unmodified	_AEKYPKQLI_					0	0	0		nc|ENSG00000163406|Q16348-2|SLC15A2;ENSG00000163406|ENST00000489711|SLC15A2	nc|ENSG00000163406|Q16348-2|SLC15A2	nc|ENSG00000163406|Q16348-2|SLC15A2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.97998046875	2	545.318774	1088.623	-0.51742	-0.00028216	-2.2842	-0.0012456	-2.8016	-0.0015278	545.317437319651	100.61	0.61252	100.61	100.2	100.82	0					18	13	2	0	0	0	0.20789	1	10225	10225		16.473	0	1	37980			329	5795	249	249	432	432					0.08222889028479585
AELAPEPL	8	Unmodified	_AELAPEPL_					0	0	0		ENST00000603928.2_2_9:136892230-136892311:+|nuORF	ENST00000603928.2_2_9:136892230-136892311:+|nuORF	ENST00000603928.2_2_9:136892230-136892311:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2269592285156	2	420.229094	838.443634	-1.3512	-0.00056782	-1.7107	-0.00071887	-3.0619	-0.0012867	420.2282629742312	76.938	2.2039	76.938	74.958	77.162	0					134	85	2	0	0	0	0.91005	1	6988	6988		42.474	3.6683	1	154140			330	14424	250	250	433	433					0.017950047405179248
AELAVGSRW	9	Unmodified	_AELAVGSRW_					0	0	0		nc|ENSG00000107745|Q9BPX6-2|MICU1;ENSG00000107745|ENST00000361114|MICU1;nc|ENSG00000107745|Q9BPX6-3|MICU1;nc|ENSG00000107745|Q9BPX6-6|MICU1;ENST00000604025.1_1_10:74322649-74385775:-|nuORF	nc|ENSG00000107745|Q9BPX6-2|MICU1	nc|ENSG00000107745|Q9BPX6-2|MICU1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.76300048828125	2	494.764166	987.513779	0.010174	5.0339E-06	-0.49257	-0.0002437	-0.48239	-0.00023867	494.7639179313361	52.272	0.66656	52.27	51.915	52.582	-0.0020447					24	15	2	0	0	0	0.72476	2	4501	4501;4513		38.754	3.1353	1	119400			331	2365	251	251	434;435	434					0.01952303128996391
AELAVGSRW	9	Unmodified	_AELAVGSRW_					0	0	0		nc|ENSG00000107745|Q9BPX6-2|MICU1;ENSG00000107745|ENST00000361114|MICU1;nc|ENSG00000107745|Q9BPX6-3|MICU1;nc|ENSG00000107745|Q9BPX6-6|MICU1;ENST00000604025.1_1_10:74322649-74385775:-|nuORF	nc|ENSG00000107745|Q9BPX6-2|MICU1	nc|ENSG00000107745|Q9BPX6-2|MICU1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.76336669921875	2	494.764166	987.513779	-0.60396	-0.00029882	0.43156	0.00021352	-0.17239	-8.5294E-05	494.76428352990615	52.152	0.59816	52.128	51.902	52.5	-0.023849					21	13	2	0	0	0	0.58063	1	4589	4589		47.96	7.3869	1	153490			332	2365	251	251	436	436					0.01952303128996391
AELAVGSRW	9	Unmodified	_AELAVGSRW_					0	0	0		nc|ENSG00000107745|Q9BPX6-2|MICU1;ENSG00000107745|ENST00000361114|MICU1;nc|ENSG00000107745|Q9BPX6-3|MICU1;nc|ENSG00000107745|Q9BPX6-6|MICU1;ENST00000604025.1_1_10:74322649-74385775:-|nuORF	nc|ENSG00000107745|Q9BPX6-2|MICU1	nc|ENSG00000107745|Q9BPX6-2|MICU1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7644348144531	2	494.764166	987.513779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.177	1	52.189	51.689	52.689	0.012436								0	0	0	0.39031	1	4535	4535		53.089	12.516	1				333	2365	251	251	437	437					0.01952303128996391
AELDKKLL	8	Unmodified	_AELDKKLL_					0	0	0		nc|ENSG00000160460|Q9H254-3|SPTBN4;ENSG00000160460|ENST00000598249|SPTBN4;ENST00000596900.5_1_19:41036434-41060733:+|nuORF;nc|ENSG00000160460|Q9H254-5|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4	nc|ENSG00000160460|Q9H254-3|SPTBN4	nc|ENSG00000160460|Q9H254-3|SPTBN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.2867431640625	2	465.286943	928.559333	0.55544	0.00025844	-0.35227	-0.00016391	0.20317	9.4533E-05	465.28665991732896	77.113	1.0041	77.248	76.927	77.932	0.13478					108	48	3	0	0	0	0.86677	1	7292	7292		27.882	1.1893	1	1591900			334	5590	252	252	438	438					0.09219528591370363
AELDKVIK	8	Unmodified	_AELDKVIK_					0	0	0			REV__ENSG00000143079|ENST00000271277|CTTNBP2NL	REV__ENSG00000143079|ENST00000271277|CTTNBP2NL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.2781677246094	2	458.279118	914.543683	-1.5855	-0.0007266	0.54861	0.00025142	-1.0369	-0.00047518	458.2792815260094	48.149	1.0294	48.618	48.045	49.074	0.46941					57	25	3	0	0	0	0.77771	1	4628	4628		64.207	2.0999	1	1260300	+		335	19769	253	253	439	439					0.08299242074326685
AELELEMPT	9	Unmodified	_AELELEMPT_					0	0	0		nc|ENSG00000204084|P32019-4|INPP5B;ENSG00000204084|ENST00000373024|INPP5B;nc|ENSG00000204084|P32019|INPP5B	nc|ENSG00000204084|P32019-4|INPP5B	nc|ENSG00000204084|P32019-4|INPP5B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2869873046875	2	516.749533	1031.48451	0.76916	0.00039747	2.795	0.0014443	3.5642	0.0018418	516.7506804027353	28.893	0.50883	28.719	28.468	28.977	-0.17336					24	11	3	0	0	0	0.20789	1	1810	1810		27.882	15.676	1	152670			336	8410	254	254	440	440					-0.029970220021596106
AELEPLKE	8	Unmodified	_AELEPLKE_					0	0	0		ENST00000549935.6_1_12:54107863-54119026:-|nuORF;nc|ENSG00000012822|Q9P1Z2-4|CALCOCO1;nc|ENSG00000012822|Q9P1Z2-2|CALCOCO1;nc|ENSG00000012822|Q9P1Z2-3|CALCOCO1;ENSG00000012822|ENST00000550804|CALCOCO1	ENST00000549935.6_1_12:54107863-54119026:-|nuORF	ENST00000549935.6_1_12:54107863-54119026:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7537536621094	2	464.752933	927.491313	0.0037979	1.7651E-06	1.0163	0.00047231	1.0201	0.00047408	464.75343403343453	29.703	0.68134	29.688	29.401	30.082	-0.015167					25	18	2	0	0	0	0.89962	1	1508	1508		38.806	0	1	38113			337	805	255	255	441	441					0.024666589407161155
AELEVVPII	9	Unmodified	_AELEVVPII_					0	0	0		nc|ENSG00000125733|Q15642-5|TRIP10;nc|ENSG00000125733|Q15642-4|TRIP10;ENST00000595305.5_1_19:6739772-6750443:+|nuORF;nc|ENSG00000125733|Q15642-2|TRIP10;nc|ENSG00000125733|Q15642-3|TRIP10;ENSG00000125733|ENST00000313244|TRIP10	nc|ENSG00000125733|Q15642-5|TRIP10	nc|ENSG00000125733|Q15642-5|TRIP10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79364013671875	2	491.794601	981.574648	-0.78467	-0.0003859	2.7918	0.001373	2.0072	0.00098711	491.7961077186052	63.812	0.83656	63.842	63.506	64.343	0.030247					49	34	2	0	0	0	0.78058	1	5594	5594		30.504	0	1	86161			338	3410	256	256	442	442					0.08312395388577443
AELGGLLKY	9	Unmodified	_AELGGLLKY_					0	0	0		ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	482.2807922363281	2	482.279118	962.543683	-0.23723	-0.00011441	-0.62026	-0.00029914	-0.85749	-0.00041355	482.27922044524684	64.86	0.80567	64.826	64.299	65.104	-0.03479					49	22	3	0	0	0	0.096131	1	6205	6205		93.195	5.4412	1	186620			339	2425	257	257	443	443					0.06091242074330694
AELGGLLKY	9	Unmodified	_AELGGLLKY_					0	0	0		ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	482.279118	962.543683	-0.095011	-4.5822E-05	-0.65966	-0.00031814	-0.75467	-0.00036396	482.2792913697604	65.065	0.88116	65.07	64.507	65.388	0.0046997	0.12199	-2.0732E-05	NaN	93.195	48	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	175010			340	2425	257	257							0.06091242074330694
AELHQKQLTKS	11	Unmodified	_AELHQKQLTKS_					0	0	0			REV__nc|ENSG00000106384|Q86VF5-2|MOGAT3	REV__nc|ENSG00000106384|Q86VF5-2|MOGAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3626098632812	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.58425	1	12438	12438		45.972	6.7194	1	27133000	+		341	17609	258	258	444	444					0.07451545000549231
AELIMSRCVQ	10	Unmodified	_AELIMSRCVQ_					0	0	0		ENST00000477168.6_1_19:36036641-36037810:+|nuORF;ENST00000595467.1_1_19:36037522-36037810:+|nuORF	ENST00000477168.6_1_19:36036641-36037810:+|nuORF	ENST00000477168.6_1_19:36036641-36037810:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.29443359375	2	575.291376	1148.5682	-0.38737	-0.00022285	2.0302	0.0011679	1.6428	0.00094509	575.2938552163392	76.272	2.3519	76.672	75.494	77.846	0.3997					143	62	4	0	0	0	0.6116	1	8673	8673		49.442	1.482	1	1387300			342	12353	259	259	445	445					-0.00014189106104822713
AELIRAEQ	8	Unmodified	_AELIRAEQ_					0	0	0		ENST00000392622.3_1_1:153591296-153591350:-|nuORF	ENST00000392622.3_1_1:153591296-153591350:-|nuORF	ENST00000392622.3_1_1:153591296-153591350:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.25604248046875	2	465.256174	928.497795	2.2316	0.0010382	-2.0675	-0.00096192	0.16404	7.6322E-05	465.25495879925415	26.009	1.3902	25.578	25.068	26.458	-0.4311					76	31	4	0	0	0	0.37302	1	1389	1389		87.754	2.8388	1	1215300			343	11029	260	260	446	446					0.030685968920806772
AELKIPELAAQ	11	Unmodified	_AELKIPELAAQ_					0	0	0		ENST00000473758.5_1_14:23533663-23536544:-|nuORF	ENST00000473758.5_1_14:23533663-23536544:-|nuORF	ENST00000473758.5_1_14:23533663-23536544:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.83984375	2	591.840071	1181.66559	0.20248	0.00011984	-0.36623	-0.00021675	-0.16375	-9.6911E-05	591.8398150448855	54.249	0.92471	54.656	54.235	55.16	0.40663					49	21	3	0	0	0	0.39278	1	5514	5514		59.931	3.2097	1	1205800			344	12291	261	261	447	447					0.08202239366028152
AELKIPELAAQ	11	Unmodified	_AELKIPELAAQ_					0	0	0		ENST00000473758.5_1_14:23533663-23536544:-|nuORF	ENST00000473758.5_1_14:23533663-23536544:-|nuORF	ENST00000473758.5_1_14:23533663-23536544:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	591.840087890625	2	591.840071	1181.66559	-0.40666	-0.00024068	0.26269	0.00015547	-0.14397	-8.5206E-05	591.8401589231509	54.069	0.87833	54.654	54.291	55.169	0.58474					54	20	4	0	0	0	0.31387	2	5504	5504;5516		72.879	10.175	1	1346000			345	12291	261	261	448;449	448					0.08202239366028152
AELKIVADQL	10	Unmodified	_AELKIVADQL_					0	0	0		ENST00000587765.1_1_19:38282509-38282806:+|nuORF;ENST00000545518.1_1_16:71950471-71955437:+|nuORF;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990-3|IST1;nc|ENSG00000182149|P53990|IST1;ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-5|IST1	ENST00000587765.1_1_19:38282509-38282806:+|nuORF	ENST00000587765.1_1_19:38282509-38282806:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3228759765625	2	550.321514	1098.62847	-1.595	-0.00087777	1.1122	0.00061209	-0.48276	-0.00026567	550.3220158018557	60.03	0.57064	60.42	60.215	60.786	0.39077					28	15	2	0	0	0	0.19646	1	6374	6374		86.882	12.627	1	795180			346	7424	262	262	450	450					0.08310567820285542
AELKIVADQL	10	Unmodified	_AELKIVADQL_					0	0	0		ENST00000587765.1_1_19:38282509-38282806:+|nuORF;ENST00000545518.1_1_16:71950471-71955437:+|nuORF;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990-3|IST1;nc|ENSG00000182149|P53990|IST1;ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-5|IST1	ENST00000587765.1_1_19:38282509-38282806:+|nuORF	ENST00000587765.1_1_19:38282509-38282806:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.32275390625	2	550.321514	1098.62847	-0.71912	-0.00039575	0.41769	0.00022987	-0.30143	-0.00016588	550.3215471548743	59.953	0.5795	60.507	60.239	60.818	0.55323					34	15	3	0	0	0	0.57305	1	6356	6356		51.528	2.0862	1	695510			347	7424	262	262	451	451					0.08310567820285542
AELKPNKILVE	11	Unmodified	_AELKPNKILVE_					0	0	0			REV__nc|ENSG00000175216|Q14008-2|CKAP5	REV__nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3841552734375	2	627.37682	1252.73909	6.5882	0.0041333	2.0403	0.00128	8.6285	0.0054133	627.3778538382699	111.82	0.62036	111.85	111.67	112.29	0.032707					64	21	4	0	0	0	0.73893	1	13550	13550		24.519	1.9395	1	10130000	+		348	22050	263	263	452	452					0.12282787808521789
AELLNRLKEK	10	Unmodified	_AELLNRLKEK_					0	0	0		ENST00000485065.1_1_10:116698192-116719580:+|nuORF;ENSG00000165832|ENST00000298746|TRUB1	ENST00000485065.1_1_10:116698192-116719580:+|nuORF	ENST00000485065.1_1_10:116698192-116719580:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.24920654296875	3	405.24695	1212.71902	1.65	0.00066868	-1.1207	-0.00045416	0.52934	0.00021451	405.24639893952656	23.489	3.066	23.108	22.404	25.47	-0.38178					149	70	4	0	0	0	0.86089	1	1121	1121		34.087	2.4522	1	247320			349	6131	264	264	453	453					0.12117036868539799
AELLQVANY	9	Unmodified	_AELLQVANY_					0	0	0		ENSG00000072682|ENST00000360568|P4HA2;nc|ENSG00000072682|O15460|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.7716064453125	2	510.771657	1019.52876	-0.47769	-0.00024399	0.58907	0.00030088	0.11139	5.6892E-05	510.7717753358817	71.723	0.70918	71.684	71.344	72.053	-0.039001					46	26	2	0	0	0	0.21969	2	6986	6969;6986		71.877	23.962	1	248170			350	1280	265	265	454;455	455					0.01977750206322071
AELLQVANY	9	Unmodified	_AELLQVANY_					0	0	0		ENSG00000072682|ENST00000360568|P4HA2;nc|ENSG00000072682|O15460|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.77069091796875	2	510.771657	1019.52876	-0.64993	-0.00033197	0.63389	0.00032377	-0.016045	-8.1952E-06	510.77187525321716	71.61	0.5751	71.651	71.424	71.999	0.040222					48	23	3	0	0	0	0.36616	1	6874	6874		60.118	1.3363	1	203960			351	1280	265	265	456	456					0.01977750206322071
AELLQVANY	9	Unmodified	_AELLQVANY_					0	0	0		ENSG00000072682|ENST00000360568|P4HA2;nc|ENSG00000072682|O15460|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	510.771657	1019.52876	-0.39118	-0.00019981	0.6021	0.00030753	0.21091	0.00010773	511.27360969725197	71.273	0.40425	71.407	71.255	71.66	0.13356	-0.09894	-6.6737E-05	NaN	71.877	22	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55047			352	1280	265	265							0.01977750206322071
AELLQVANY	9	Unmodified	_AELLQVANY_					0	0	0		ENSG00000072682|ENST00000360568|P4HA2;nc|ENSG00000072682|O15460|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	510.771657	1019.52876	0.54663	0.0002792	0.19536	9.9784E-05	0.74199	0.00037899	511.2734575527418	71.119	0.46587	71.248	71.145	71.611	0.12964	-0.25736	-0.00048224	NaN	71.877	25	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67730			353	1280	265	265							0.01977750206322071
AELLQVANY	9	Unmodified	_AELLQVANY_					0	0	0		ENSG00000072682|ENST00000360568|P4HA2;nc|ENSG00000072682|O15460|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	510.771657	1019.52876	-0.99141	-0.00050638	1.9198	0.00098059	0.92841	0.0004742	511.2745208826637	71.462	0.41005	71.538	71.238	71.648	0.076225	0.032691	0.0012794	NaN	71.877	28	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43426			354	1280	265	265							0.01977750206322071
AELLRLGPAV	10	Unmodified	_AELLRLGPAV_					0	0	0			REV__ENSG00000204128|ENST00000373640|C2orf72	REV__ENSG00000204128|ENST00000373640|C2orf72	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.818359375	2	519.818941	1037.62333	0.30718	0.00015968	-1.646	-0.0008556	-1.3388	-0.00069592	519.817982893576	85.216	0.64485	85.656	85.425	86.07	0.43967					43	15	3	0	0	0	0.86471	1	9939	9939		30.318	1.1682	1	926980	+		355	23460	266	266	457	457					0.10602308748298128
AELLTPAP	8	Unmodified	_AELLTPAP_					0	0	0			REV__ENST00000367279.8_1_1:202128675-202129107:-|nuORF	REV__ENST00000367279.8_1_1:202128675-202129107:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.785400390625	2	406.231636	810.448719	-0.14424	-5.8596E-05	0.83384	0.00033873	0.6896	0.00028014	406.2318132506185	34.796	0.79985	34.791	34.454	35.254	-0.0047417					27	20	2	0	0	0	0.4196	1	2114	2114		38.806	0	1	74068	+		356	25560	267	267	458	458					0.03591308603131438
AELQGLPVDKL	11	Unmodified	_AELQGLPVDKL_					0	0	0			REV__nc|ENSG00000116580|Q3T8J9-3|GON4L	REV__nc|ENSG00000116580|Q3T8J9-3|GON4L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.8392333984375	2	591.840071	1181.66559	0.20248	0.00011984	-0.36623	-0.00021675	-0.16375	-9.6911E-05	591.8398150448855	54.249	0.92471	54.656	54.235	55.16	0.40663					49	21	3	0	0	0	0.32541	1	5525	5525		68.846	5.4197	1	1205800	+		357	18204	268	268	459	459					0.0820223936605089
AELREVASPK	10	Unmodified	_AELREVASPK_					0	0	0			REV__ENSG00000125898|ENST00000381941|FAM110A	REV__ENSG00000125898|ENST00000381941|FAM110A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3089599609375	2	550.308938	1098.60332	-1.3837	-0.00076145	1.4645	0.00080594	0.080854	4.4495E-05	550.3096185599048	31.41	0.90482	31.49	31.121	32.026	0.079834					52	20	4	0	0	0	0.54701	1	2145	2145		52.937	1.6012	1	1494500	+		358	18680	269	269	460	460					0.05796513017708094
AEMLTAKVKAV	11	Unmodified	_AEMLTAKVKAV_					0	0	0		nc|ENSG00000137962|Q52LW3-2|ARHGAP29;ENSG00000137962|ENST00000260526|ARHGAP29	nc|ENSG00000137962|Q52LW3-2|ARHGAP29	nc|ENSG00000137962|Q52LW3-2|ARHGAP29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.8406372070312	2	580.839017	1159.66348	-0.43283	-0.00025141	3.0566	0.0017754	2.6237	0.001524	580.8405993802119	69.859	0.92783	69.822	69.57	70.498	-0.036957					124	48	3	0	0	0	0.66929	1	6821	6821		36.447	9.7538	1	18374000			359	4249	270	270	461	461					0.09003487356585538
AENISRVLY	9	Unmodified	_AENISRVLY_					0	0	0		nc|ENSG00000068976|P11217-2|PYGM;nc|ENSG00000100504|P06737-2|PYGL;ENSG00000068976|ENST00000164139|PYGM;ENSG00000100994|ENST00000216962|PYGB;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000068976|P11217-2|PYGM	nc|ENSG00000068976|P11217-2|PYGM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.789794921875	2	532.790381	1063.56621	0.063295	3.3723E-05	-0.049225	-2.6227E-05	0.01407	7.4961E-06	532.7901842502431	51.486	0.98292	51.484	51.132	52.115	-0.0020447					39	22	3	0	0	0	0.17881	1	4400	4400		78.264	24.912	1	321910			360	1211	271	271	462	462					0.03696841471969492
AENISRVLY	9	Unmodified	_AENISRVLY_					0	0	0		nc|ENSG00000068976|P11217-2|PYGM;nc|ENSG00000100504|P06737-2|PYGL;ENSG00000068976|ENST00000164139|PYGM;ENSG00000100994|ENST00000216962|PYGB;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000068976|P11217-2|PYGM	nc|ENSG00000068976|P11217-2|PYGM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.790771484375	2	532.790381	1063.56621	-0.062079	-3.3075E-05	-0.044344	-2.3626E-05	-0.10642	-5.6701E-05	532.7902544677413	51.413	0.79459	51.39	51.07	51.865	-0.02343					41	18	3	0	0	0	0.36889	1	4488	4488		59.931	10.489	1	380590			361	1211	271	271	463	463					0.03696841471969492
AENISRVLY	9	Unmodified	_AENISRVLY_					0	0	0		nc|ENSG00000068976|P11217-2|PYGM;nc|ENSG00000100504|P06737-2|PYGL;ENSG00000068976|ENST00000164139|PYGM;ENSG00000100994|ENST00000216962|PYGB;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000068976|P11217-2|PYGM	nc|ENSG00000068976|P11217-2|PYGM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.7903442382812	2	532.790381	1063.56621	0.3062	0.00016314	-0.11342	-6.0427E-05	0.19279	0.00010271	532.7901097180957	51.47	0.8292	51.482	51.136	51.965	0.012436					42	19	3	0	0	0	0.47797	1	4446	4446		53.089	3.0644	1	398810			362	1211	271	271	464	464					0.03696841471969492
AENKDEIAL	9	Unmodified	_AENKDEIAL_					0	0	0		ENSG00000079246|ENST00000392132|XRCC5;ENST00000429133.5_1_2:216974075-216982480:+|nuORF;ENST00000476360.1_1_2:216974075-216981630:+|nuORF	ENSG00000079246|ENST00000392132|XRCC5	ENSG00000079246|ENST00000392132|XRCC5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.7579040527344	2	501.758746	1001.50294	-2.8009	-0.0014054	0.55704	0.0002795	-2.2439	-0.0011259	501.7589241846743	41.179	0.7187	41.571	41.307	42.026	0.39209					46	19	4	0	0	0	0.012649	3	3591	3578;3591;3604		131.03	29.431	1	6623000			363	1412	272	272	465;466;467	466					0.002248559640406711
AENKDEIAL	9	Unmodified	_AENKDEIAL_					0	0	0		ENSG00000079246|ENST00000392132|XRCC5;ENST00000429133.5_1_2:216974075-216982480:+|nuORF;ENST00000476360.1_1_2:216974075-216981630:+|nuORF	ENSG00000079246|ENST00000392132|XRCC5	ENSG00000079246|ENST00000392132|XRCC5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.75439453125	2	501.758746	1001.50294	-1.254	-0.00062919	-0.6715	-0.00033693	-1.9255	-0.00096612	501.75830722058777	41.057	1.3208	41.691	41.426	42.746	0.6339					61	35	4	0	0	0	0.034797	2	3572	3572;3584		115.49	15.826	1	6560600			364	1412	272	272	468;469	468					0.002248559640406711
AENKEIQKL	9	Unmodified	_AENKEIQKL_					0	0	0		ENSG00000106541|ENST00000419304|AGR2	ENSG00000106541|ENST00000419304|AGR2	ENSG00000106541|ENST00000419304|AGR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	536.8037109375	2	536.803488	1071.59242	0.51301	0.00027539	-0.57261	-0.00030738	-0.059603	-3.1995E-05	536.8030718305589	26.228	0.94922	26.274	25.931	26.88	0.045509					67	26	4	0	0	0	4.5757E-05	4	1095	1085;1095;1107;1117		150.36	28.186	1	672220			365	2300	273	273	470;471;472;473	471					0.05949110643427957
AENKEIQKL	9	Unmodified	_AENKEIQKL_					0	0	0		ENSG00000106541|ENST00000419304|AGR2	ENSG00000106541|ENST00000419304|AGR2	ENSG00000106541|ENST00000419304|AGR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.8035278320312	2	536.803488	1071.59242	0.44089	0.00023667	-0.7115	-0.00038194	-0.27062	-0.00014527	536.803069174613	26.4	1.1845	26.361	25.89	27.075	-0.038523					63	27	4	0	0	0	0.021781	2	1194	1170;1194		124.08	18.987	1	879030			366	2300	273	273	474;475	475					0.05949110643427957
AENKEIQKL	9	Unmodified	_AENKEIQKL_					0	0	0		ENSG00000106541|ENST00000419304|AGR2	ENSG00000106541|ENST00000419304|AGR2	ENSG00000106541|ENST00000419304|AGR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	536.80322265625	2	536.803488	1071.59242	0.85568	0.00045933	-1.1229	-0.00060277	-0.26722	-0.00014344	536.8027987899134	26.493	1.7699	26.461	25.952	27.722	-0.032125					84	42	4	0	0	0	4.5757E-05	4	1130	1109;1118;1130;1142		150.36	26.281	1	712220			367	2300	273	273	476;477;478;479	478					0.05949110643427957
AEPARAPPRR	10	Unmodified	_AEPARAPPRR_					0	0	0			REV__ENST00000589123.5_2_19:3463128-3463455:+|nuORF	REV__ENST00000589123.5_2_19:3463128-3463455:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8201293945312	2	560.820338	1119.62612	1.394	0.00078178	-2.3679	-0.001328	-0.97394	-0.00054621	560.8189408405052	92.38	3.0704	92.425	91.102	94.172	0.045456					218	72	4	0	0	0	0.70553	1	9663	9663		44.377	5.1244	1	723720	+		368	29157	274	274	480	480					0.07109576925836336
AEPDIIEQL	9	Unmodified	_AEPDIIEQL_					0	0	0		nc|ENSG00000122550|Q8IXQ5-3|KLHL7;ENSG00000122550|ENST00000339077|KLHL7;nc|ENSG00000122550|Q8IXQ5-4|KLHL7;nc|ENSG00000122550|Q8IXQ5-5|KLHL7;nc|ENSG00000122550|Q8IXQ5-2|KLHL7	nc|ENSG00000122550|Q8IXQ5-3|KLHL7	nc|ENSG00000122550|Q8IXQ5-3|KLHL7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.7704467773438	2	514.268947	1026.52334	0.58068	0.00029863	-0.5321	-0.00027364	0.04858	2.4983E-05	514.2686133611016	76.853	0.54735	77.253	76.951	77.499	0.3997					28	19	2	0	0	0	0.58063	1	8723	8723		47.96	3.4285	1	444300			369	3231	275	275	481	481					0.011140266238726326
AEPEYVCVGS	10	Unmodified	_AEPEYVCVGS_					0	0	0		ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.2305908203125	2	527.231507	1052.44846	-1.2367	-0.00065204	-1.7674	-0.00093181	-3.0041	-0.0015838	527.2304997593297	90.048	0.90989	90.519	90.214	91.124	0.47068					39	23	2	0	0	0	0.64457	1	10704	10704		47.657	8.4045	1	1351700			370	921	276	276	482	482					-0.07566479179013186
AEPGSVISW	9	Unmodified	_AEPGSVISW_					0	0	0		nc|ENSG00000204577|O75022|LILRB3;nc|ENSG00000204577|O75022-3|LILRB3;nc|ENSG00000204577|O75022-2|LILRB3;nc|ENSG00000244482|Q6PI73-2|LILRA6;nc|ENSG00000244482|Q6PI73|LILRA6;ENSG00000244482|ENST00000396365|LILRA6;ENSG00000204577|ENST00000445347|LILRB3;nc|ENSG00000186818|Q8NHJ6-2|LILRB4;nc|ENSG00000186818|Q8NHJ6|LILRB4;ENSG00000186818|ENST00000695418|LILRB4;nc|ENSG00000186818|Q8NHJ6-3|LILRB4	nc|ENSG00000204577|O75022|LILRB3	nc|ENSG00000204577|O75022|LILRB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.23736572265625	2	473.23745	944.460347	-1.1743	-0.00055571	0.99213	0.00046951	-0.18214	-8.6196E-05	473.2379433056203	72.309	0.60153	72.351	72.001	72.602	0.042114					62	26	3	0	0	0	0.10807	1	6944	6944		90.777	26.569	1	251020			371	15211	277	277	483	483					-0.014104943735219422
AEPGSVISW	9	Unmodified	_AEPGSVISW_					0	0	0		nc|ENSG00000204577|O75022|LILRB3;nc|ENSG00000204577|O75022-3|LILRB3;nc|ENSG00000204577|O75022-2|LILRB3;nc|ENSG00000244482|Q6PI73-2|LILRA6;nc|ENSG00000244482|Q6PI73|LILRA6;ENSG00000244482|ENST00000396365|LILRA6;ENSG00000204577|ENST00000445347|LILRB3;nc|ENSG00000186818|Q8NHJ6-2|LILRB4;nc|ENSG00000186818|Q8NHJ6|LILRB4;ENSG00000186818|ENST00000695418|LILRB4;nc|ENSG00000186818|Q8NHJ6-3|LILRB4	nc|ENSG00000204577|O75022|LILRB3	nc|ENSG00000204577|O75022|LILRB3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	473.23745	944.460347	-0.10821	-5.121E-05	0.37353	0.00017677	0.26532	0.00012556	473.23745256226675	72.462	0.74995	72.499	72.152	72.901	0.037148	0.096356	-0.00014701	NaN	90.777	58	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217200			372	15211	277	277							-0.014104943735219422
AEPGSVISW	9	Unmodified	_AEPGSVISW_					0	0	0		nc|ENSG00000204577|O75022|LILRB3;nc|ENSG00000204577|O75022-3|LILRB3;nc|ENSG00000204577|O75022-2|LILRB3;nc|ENSG00000244482|Q6PI73-2|LILRA6;nc|ENSG00000244482|Q6PI73|LILRA6;ENSG00000244482|ENST00000396365|LILRA6;ENSG00000204577|ENST00000445347|LILRB3;nc|ENSG00000186818|Q8NHJ6-2|LILRB4;nc|ENSG00000186818|Q8NHJ6|LILRB4;ENSG00000186818|ENST00000695418|LILRB4;nc|ENSG00000186818|Q8NHJ6-3|LILRB4	nc|ENSG00000204577|O75022|LILRB3	nc|ENSG00000204577|O75022|LILRB3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	473.23745	944.460347	-0.60796	-0.00028771	0.30469	0.00014419	-0.30327	-0.00014352	473.23751615212393	72.399	1.0346	72.358	71.99	73.024	-0.04039	-0.044478	-0.00021216	NaN	90.777	69	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	243560			373	15211	277	277							-0.014104943735219422
AEPIDELKL	9	Unmodified	_AEPIDELKL_					0	0	0		ENSG00000162814|ENST00000366933|SPATA17	ENSG00000162814|ENST00000366933|SPATA17	ENSG00000162814|ENST00000366933|SPATA17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.287109375	2	514.28714	1026.55973	0.075919	3.9044E-05	0.0063684	3.2752E-06	0.082288	4.2319E-05	514.2868371216251	80.533	0.67133	80.954	80.637	81.309	0.4215					34	15	4	0	0	0	0.41566	1	9258	9258		56.721	7.2795	1	316840			374	5740	278	278	484	484					0.04750903520562133
AEPLEIILHL	10	Unmodified	_AEPLEIILHL_					0	0	0		ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.343994140625	2	574.339707	1146.66486	0.84048	0.00048272	-1.1274	-0.00064752	-0.28693	-0.0001648	574.3388865139082	94.083	1.0972	94.522	94.192	95.289	0.43892					86	29	4	0	0	0	0.020748	6	11212	11202;11212;11220;11230;11238;11250		120.62	39.301	1	2392200			375	1800	279	279	485;486;487;488;489;490	486					0.09739444717001788
AEPLEIILHL	10	Unmodified	_AEPLEIILHL_					0	0	0		ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.8429565429688	2	574.339707	1146.66486	-0.0853	-4.8991E-05	-0.21705	-0.00012466	-0.30235	-0.00017365	574.3394307516232	94.244	1.0192	94.679	94.35	95.369	0.43539					63	26	3	0	0	0	0.026937	5	11278	11278;11287;11296;11307;11317		116.9	37.453	1	2886500			376	1800	279	279	491;492;493;494;495	491					0.09739444717001788
AEPSLNILL	9	Unmodified	_AEPSLNILL_					0	0	0			REV__ENST00000491177.1_1_1:153599613-153600015:-|nuORF	REV__ENST00000491177.1_1_1:153599613-153600015:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.28570556640625	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.032	1	30.06	29.56	30.56	0.028618								0	0	0	0.28009	1	1936	1936		39.253	3.6345	1		+		377	27652	280	280	496	496					0.06871224728752168
AEPSSPLLVG	10	Unmodified	_AEPSSPLLVG_					0	0	0			REV__ENSG00000074590|ENST00000261402|NUAK1	REV__ENSG00000074590|ENST00000261402|NUAK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2653503417969	2	485.266207	968.517862	-0.8809	-0.00042747	-1.7168	-0.00083312	-2.5977	-0.0012606	485.26525209052494	43.295	1.2543	43.728	43.419	44.674	0.4334					80	30	5	0	0	0	0.43769	1	3883	3883		60.972	2.19	1	9714800	+		378	16692	281	281	497	497					0.032343478320512986
AEQKVEYTL	9	Unmodified	_AEQKVEYTL_					0	0	0		ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;ENST00000460829.5_1_3:184046782-184052693:+|nuORF	ENST00000442406.5_1_3:184038690-184052693:+|nuORF	ENST00000442406.5_1_3:184038690-184052693:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.7779541015625	2	540.782222	1079.54989	-1.8678	-0.0010101	-0.71189	-0.00038498	-2.5797	-0.0013951	540.781575233307	43.761	0.88697	44.535	44.343	45.23	0.7738					31	21	3	0	0	0	0.12688	1	3994	3994		87.696	23.489	1	740490			379	2796	282	282	498	498					0.013297155152031337
AEQLFHLNF	9	Unmodified	_AEQLFHLNF_					0	0	0		ENSG00000125149|ENST00000219139|PHAF1;nc|ENSG00000125149|Q9BSU1-2|PHAF1;ENST00000569626.1_1_16:67154016-67168169:+|nuORF;ENST00000569683.5_1_16:67144033-67168649:+|nuORF	ENSG00000125149|ENST00000219139|PHAF1	ENSG00000125149|ENST00000219139|PHAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	559.782958984375	2	559.785099	1117.55564	-1.0955	-0.00061324	1.1825	0.00066192	0.086964	4.8681E-05	559.785750415794	77.907	0.40295	77.959	77.735	78.138	0.052704					27	17	2	0	0	0	0.41984	1	7558	7558		56.434	6.9922	1	100870			380	3374	283	283	499	499					0.0015685881751323905
AEQLFHLNF	9	Unmodified	_AEQLFHLNF_					0	0	0		ENSG00000125149|ENST00000219139|PHAF1;nc|ENSG00000125149|Q9BSU1-2|PHAF1;ENST00000569626.1_1_16:67154016-67168169:+|nuORF;ENST00000569683.5_1_16:67144033-67168649:+|nuORF	ENSG00000125149|ENST00000219139|PHAF1	ENSG00000125149|ENST00000219139|PHAF1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	559.785099	1117.55564	0.62166	0.000348	-0.67953	-0.00038039	-0.05787	-3.2395E-05	559.7847727748234	77.789	0.5163	77.839	77.568	78.084	0.049698	-0.062026	-0.00086959	NaN	56.434	33	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84132			381	3374	283	283							0.0015685881751323905
AEQYLILKQT	10	Unmodified	_AEQYLILKQT_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-6|NDC1	REV__nc|ENSG00000058804|Q9BTX1-6|NDC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.2118225097656	3	402.895806	1205.66559	0.77669	0.00031292	-0.15082	-6.0765E-05	0.62586	0.00025216	402.8956282993727	33.134	0.58953	33.346	32.977	33.566	0.21168					19	13	2	0	0	0	0.37624	1	2404	2404		8.0344	0	1	88356	+		382	16441	284	284	500	500					0.07098239366041525
AERAMAKAVTT	11	Unmodified	_AERAMAKAVTT_					0	0	0			REV__nc|ENSG00000060709|O15034-2|RIMBP2	REV__nc|ENSG00000060709|O15034-2|RIMBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.8064575195312	2	574.808248	1147.60194	-0.92196	-0.00052995	-1.368	-0.00078634	-2.29	-0.0013163	574.8069824667461	33.956	0.7061	33.951	33.628	34.334	-0.0047379					37	16	4	0	0	0	0.7144	1	2032	2032		29.17	2.4771	1	142260	+		383	16451	285	285	501	501					0.034045556572891655
AERHQTVHSEY	11	Unmodified	_AERHQTVHSEY_					0	0	0			REV__ENST00000398805.7_1_9:115142364-115166433:+|nuORF	REV__ENST00000398805.7_1_9:115142364-115166433:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.880126953125	3	452.881219	1355.62183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.326	1	25.326	24.826	25.826	0								0	0	0	0.56276	1	912	912		23.378	1.5975	1		+		384	26213	286	286	502	502					-0.04175977078375581
AERLVQLKRSI	11	Unmodified	_AERLVQLKRSI_					0	0	0			REV__ENSG00000146950|ENST00000380913|SHROOM2	REV__ENSG00000146950|ENST00000380913|SHROOM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.27288818359375	3	438.273499	1311.79867	2.7278	0.0011955	-3.9418	-0.0017276	-1.2141	-0.00053209	438.27166879991887	107.29	1.1275	107.26	106.75	107.88	-0.034134					106	26	5	0	0	0	0.76087	1	11834	11834		19.627	0.36425	1	5019700	+		385	20044	287	287	503	503					0.1552410354256608
AERQSLLPKSD	11	Unmodified	_AERQSLLPKSD_					0	0	0			REV__nc|ENSG00000033122|Q96NW7-2|LRRC7	REV__nc|ENSG00000033122|Q96NW7-2|LRRC7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3357543945312	2	622.335684	1242.65681	2.9643	0.0018448	-1.825	-0.0011358	1.1393	0.00070904	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.70847	1	12348	12348		33.922	7.2287	1	435720	+		386	15454	288	288	504	504					0.04519265729572908
AERRRRRRRRR	11	Unmodified	_AERRRRRRRRR_					0	0	0			REV__ENST00000497866.5_1_1:44444922-44446927:+|nuORF	REV__ENST00000497866.5_1_1:44444922-44446927:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.8984680175781	4	406.757344	1623.00027	-1.8604	-0.00075671	2.5498	0.0010371	0.68941	0.00028042	406.75930253180695	62.826	0.73013	62.94	62.629	63.359	0.11389					49	36	2	0	0	0	0.18353	1	5531	5531		5.1424	1.931	1	89193	+		387	27778	289	289	505	505					0.21369069862112156
AERVRKLREER	11	Unmodified	_AERVRKLREER_					0	0	0		nc|ENSG00000169379|Q3SXY8-2|ARL13B;nc|ENSG00000169379|Q3SXY8-3|ARL13B;ENSG00000169379|ENST00000394222|ARL13B	nc|ENSG00000169379|Q3SXY8-2|ARL13B	nc|ENSG00000169379|Q3SXY8-2|ARL13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.2826843261719	3	481.283057	1440.82734	-0.094059	-4.5269E-05	0.1066	5.1307E-05	0.012545	6.0375E-06	481.2824632956746	102.92	3.58	102.92	102.27	105.85	0.0082092					167	86	3	0	0	0	0.79476	1	11036	11036		12.433	0	1	832110			388	6492	290	290	506	506					0.12456221171669313
AESGAKEEL	9	Unmodified	_AESGAKEEL_					0	0	0		ENSG00000277443|ENST00000612661|MARCKS	ENSG00000277443|ENST00000612661|MARCKS	ENSG00000277443|ENST00000612661|MARCKS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.2298889160156	2	467.229822	932.445091	0.6743	0.00031505	-0.31738	-0.00014829	0.35692	0.00016676	467.22952893172175	23.983	0.88836	24.038	23.587	24.475	0.055487					47	23	3	0	0	0	0.07589	1	834	834		98.629	16.324	1	227190			389	9020	291	291	507	507					-0.023834059613704994
AESGAKEEL	9	Unmodified	_AESGAKEEL_					0	0	0		ENSG00000277443|ENST00000612661|MARCKS	ENSG00000277443|ENST00000612661|MARCKS	ENSG00000277443|ENST00000612661|MARCKS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.23004150390625	2	467.229822	932.445091	-0.068521	-3.2015E-05	0.36663	0.0001713	0.2981	0.00013928	467.2298152633158	24.377	0.99719	24.334	23.879	24.876	-0.043221					49	22	3	0	0	0	0.17881	1	881	881		78.264	1.4896	1	314120			390	9020	291	291	508	508					-0.023834059613704994
AESIVVHTY	9	Unmodified	_AESIVVHTY_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.76324462890625	2	509.763832	1017.51311	0.26906	0.00013716	-1.738	-0.00088598	-1.469	-0.00074882	509.7630688475473	44.759	0.65843	44.736	44.393	45.052	-0.023079					30	14	3	0	0	0	0.0092756	3	3488	3477;3488;3500		133.81	48.453	1	262680			391	3317	292	292	509;510;511	510					0.005054636892737108
AESIVVHTY	9	Unmodified	_AESIVVHTY_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.76324462890625	2	509.763832	1017.51311	-0.75922	-0.00038702	-0.55516	-0.000283	-1.3144	-0.00067003	509.76368484649015	44.648	0.61389	44.614	44.313	44.927	-0.03347					29	13	3	0	0	0	0.0018445	3	3566	3554;3566;3578		143.11	60.802	1	279270			392	3317	292	292	512;513;514	513					0.005054636892737108
AESIVVHTY	9	Unmodified	_AESIVVHTY_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.76239013671875	2	509.763832	1017.51311	-0.90052	-0.00045905	-0.47439	-0.00024183	-1.3749	-0.00070088	509.76362677058074	44.609	0.76827	44.605	44.331	45.1	-0.0041618					33	17	3	0	0	0	1.1882E-08	3	3501	3491;3501;3513		162.31	73.663	1	290870			393	3317	292	292	515;516;517	516					0.005054636892737108
AESLPPPTL	9	Unmodified	_AESLPPPTL_					0	0	0		ENSG00000221821|ENST00000408925|C6orf226	ENSG00000221821|ENST00000408925|C6orf226	ENSG00000221821|ENST00000408925|C6orf226	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	462.7549133300781	2	462.755475	923.496398	0.53663	0.00024833	0.1827	8.4544E-05	0.71933	0.00033287	462.755141584996	75.304	0.54156	75.436	75.177	75.719	0.13207					22	14	2	0	0	0	0.76255	1	6990	6990		35.618	1.4457	1	80204			394	8667	293	293	518	518					0.031589628033202644
AESMYQIKY	9	Oxidation (M)	_AESM(Oxidation (M))YQIKY_		AESM(1)YQIKY		AESM(110)YQIKY	0	0	1		ENST00000405771.3_1_6:134618472-134619126:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;CON__H-INV:HIT000292931;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENSG00000170421|ENST00000692008|KRT8;CON__P05787;CON__Q9H552;nc|ENSG00000170421|P05787-2|KRT8	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.7677612304688	2	574.768257	1147.52196	-0.75565	-0.00043433	0.48693	0.00027987	-0.26872	-0.00015445	574.768420899859	46.221	0.88675	46.207	45.871	46.758	-0.013821					50	22	3	0	0	0	0.038282	5	3685	3672;3685;3697;3709;3721		113.41	33.699	1	547710		+	395	572	294	294	519;520;521;522;523	520		6			-0.04589930736574388
AESMYQIKY	9	Oxidation (M)	_AESM(Oxidation (M))YQIKY_		AESM(1)YQIKY		AESM(67)YQIKY	0	0	1		ENST00000405771.3_1_6:134618472-134619126:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;CON__H-INV:HIT000292931;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENSG00000170421|ENST00000692008|KRT8;CON__P05787;CON__Q9H552;nc|ENSG00000170421|P05787-2|KRT8	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.7669067382812	2	574.768257	1147.52196	-0.85731	-0.00049275	0.42667	0.00024524	-0.43064	-0.00024752	574.7685073028042	49.282	2.2586	49.279	47.883	50.142	-0.0030327					91	53	2	0	0	0	0.26953	4	4115	4054;4103;4115;4130		67.494	20.09	1	261690		+	396	572	294	294	524;525;526;527	526		6			-0.04589930736574388
AESMYQIKY	9	Oxidation (M)	_AESM(Oxidation (M))YQIKY_		AESM(1)YQIKY		AESM(110)YQIKY	0	0	1		ENST00000405771.3_1_6:134618472-134619126:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;CON__H-INV:HIT000292931;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENSG00000170421|ENST00000692008|KRT8;CON__P05787;CON__Q9H552;nc|ENSG00000170421|P05787-2|KRT8	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.76806640625	2	574.768257	1147.52196	-0.65098	-0.00037417	0.48869	0.00028089	-0.16229	-9.328E-05	574.7683604799877	46.165	0.74815	46.136	45.8	46.549	-0.028782					45	17	3	0	0	0	0.051853	5	3766	3756;3766;3779;3791;3804		107.01	30.233	1	535240		+	397	572	294	294	528;529;530;531;532	529		6			-0.04589930736574388
AESMYQIKY	9	Oxidation (M)	_AESM(Oxidation (M))YQIKY_		AESM(1)YQIKY		AESM(110)YQIKY	0	0	1		ENST00000405771.3_1_6:134618472-134619126:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;CON__H-INV:HIT000292931;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENSG00000170421|ENST00000692008|KRT8;CON__P05787;CON__Q9H552;nc|ENSG00000170421|P05787-2|KRT8	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.7671508789062	2	574.768257	1147.52196	-0.52162	-0.00029981	0.04812	2.7658E-05	-0.4735	-0.00027215	574.7682046946875	49.221	2.3014	49.197	47.906	50.207	-0.024029					95	52	2	0	0	0	0.038282	3	4207	4186;4207;4219		113.41	33.961	1	267810		+	398	572	294	294	533;534;535	534		6			-0.04589930736574388
AESMYQIKY	9	Oxidation (M)	_AESM(Oxidation (M))YQIKY_		AESM(1)YQIKY		AESM(130)YQIKY	0	0	1		ENST00000405771.3_1_6:134618472-134619126:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;CON__H-INV:HIT000292931;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENSG00000170421|ENST00000692008|KRT8;CON__P05787;CON__Q9H552;nc|ENSG00000170421|P05787-2|KRT8	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.7672119140625	2	574.768257	1147.52196	0.039725	2.2833E-05	-0.42064	-0.00024177	-0.38092	-0.00021894	574.7678563304333	46.252	0.84278	46.248	45.88	46.723	-0.0041618					46	20	3	0	0	0	0.012649	5	3741	3697;3705;3717;3729;3741		131.03	43.277	1	610260		+	399	572	294	294	536;537;538;539;540	540		6			-0.04589930736574388
AESMYQIKY	9	Oxidation (M)	_AESM(Oxidation (M))YQIKY_		AESM(1)YQIKY		AESM(100)YQIKY	0	0	1		ENST00000405771.3_1_6:134618472-134619126:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;CON__H-INV:HIT000292931;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENSG00000170421|ENST00000692008|KRT8;CON__P05787;CON__Q9H552;nc|ENSG00000170421|P05787-2|KRT8	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.76806640625	2	574.768257	1147.52196	0.18651	0.0001072	-0.57202	-0.00032878	-0.38552	-0.00022158	574.7677596368701	49.329	2.1932	49.33	48.276	50.469	0.00016785					98	49	3	0	0	0	0.057432	4	4163	4129;4152;4163;4175		104.75	29.843	1	231490		+	400	572	294	294	541;542;543;544	543		6			-0.04589930736574388
AESMYQIKY	9	Unmodified	_AESMYQIKY_					0	0	0		ENST00000405771.3_1_6:134618472-134619126:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;CON__H-INV:HIT000292931;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENSG00000170421|ENST00000692008|KRT8;CON__P05787;CON__Q9H552;nc|ENSG00000170421|P05787-2|KRT8	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	566.7708129882812	2	566.7708	1131.52705	-1.1484	-0.00065086	1.2139	0.00068798	0.065503	3.7125E-05	566.7713908970901	53.582	0.90408	53.577	53.244	54.148	-0.0053711					47	22	4	0	0	0	3.7454E-20	5	4699	4677;4687;4699;4712;4724		176.09	37.261	1	1151400		+	401	572	294	295	545;546;547;548;549	547					-0.0334562687394282
AESMYQIKY	9	Unmodified	_AESMYQIKY_					0	0	0		ENST00000405771.3_1_6:134618472-134619126:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;CON__H-INV:HIT000292931;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENSG00000170421|ENST00000692008|KRT8;CON__P05787;CON__Q9H552;nc|ENSG00000170421|P05787-2|KRT8	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	566.7706298828125	2	566.7708	1131.52705	-0.47694	-0.00027031	0.51912	0.00029422	0.042177	2.3905E-05	566.7710090768202	53.519	0.73451	53.494	53.164	53.899	-0.024754					48	17	4	0	0	0	1.2037E-08	5	4798	4763;4775;4786;4798;4811		162.25	54.165	1	1215000		+	402	572	294	295	550;551;552;553;554	553					-0.0334562687394282
AESMYQIKY	9	Unmodified	_AESMYQIKY_					0	0	0		ENST00000405771.3_1_6:134618472-134619126:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;CON__H-INV:HIT000292931;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENSG00000170421|ENST00000692008|KRT8;CON__P05787;CON__Q9H552;nc|ENSG00000170421|P05787-2|KRT8	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	ENST00000405771.3_1_6:134618472-134619126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	566.770751953125	2	566.7708	1131.52705	0.47706	0.00027038	-0.44381	-0.00025154	0.033244	1.8842E-05	566.7704465620676	53.611	0.84863	53.634	53.256	54.105	0.022541					57	22	4	0	0	0	4.0925E-29	6	4730	4704;4712;4718;4730;4742;4752		190.52	51.692	1	1241000		+	403	572	294	295	555;556;557;558;559;560	558					-0.0334562687394282
AESPAGHSF	9	Unmodified	_AESPAGHSF_					0	0	0		ENST00000438378.2_1_2:132275414-132277996:+|nuORF;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;nc|ENSG00000136699|Q9NXE4-5|SMPD4;nc|ENSG00000136699|Q9NXE4-9|SMPD4;nc|ENSG00000136699|Q9NXE4-10|SMPD4;nc|ENSG00000136699|Q9NXE4-7|SMPD4;nc|ENSG00000136699|Q9NXE4-8|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;ENSG00000136699|ENST00000680298|SMPD4;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4	ENST00000438378.2_1_2:132275414-132277996:+|nuORF	ENST00000438378.2_1_2:132275414-132277996:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.70477294921875	2	451.703774	901.392996	0.64069	0.0002894	-0.17659	-7.9765E-05	0.4641	0.00020964	451.7034112282585	30.799	0.6497	30.788	30.443	31.093	-0.010656					35	16	3	0	0	0	0.7932	1	1630	1630		23.042	1.0826	1	46764			404	4127	295	296	561	561					-0.061645245844715646
AESPERVLL	9	Unmodified	_AESPERVLL_					0	0	0		ENSG00000130775|ENST00000373921|THEMIS2;nc|ENSG00000130775|Q5TEJ8-6|THEMIS2;nc|ENSG00000130775|Q5TEJ8-3|THEMIS2;nc|ENSG00000130775|Q5TEJ8-5|THEMIS2	ENSG00000130775|ENST00000373921|THEMIS2	ENSG00000130775|ENST00000373921|THEMIS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.28173828125	2	507.284931	1012.55531	1.1501	0.00058345	-0.71379	-0.00036209	0.43635	0.00022135	507.2840657351919	48.888	0.60397	49.792	49.489	50.093	0.90424					24	14	3	0	0	0	0.66686	1	4751	4751		42.864	5.0528	1	520010			405	3683	296	297	562	562					0.04953439097675982
AESWYQTKY	9	Unmodified	_AESWYQTKY_					0	0	0		ENSG00000205420|ENST00000330722|KRT6A;ENSG00000185479|ENST00000252252|KRT6B;ENSG00000170465|ENST00000252250|KRT6C;CON__P48668;CON__P04259;CON__P02538;ENST00000553087.1_1_12:52864282-52865086:-|nuORF;CON__Q8BGZ7;CON__P50446;CON__Q922U2;CON__Q5XQN5;ENST00000547890.5_1_12:52910884-52911722:-|nuORF;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000170454|ENST00000252245|KRT75;CON__O95678;ENSG00000186081|ENST00000252242|KRT5;CON__P13647;CON__Q8VED5	ENSG00000205420|ENST00000330722|KRT6A;ENST00000547890.5_1_12:52910884-52911722:-|nuORF;CON__Q8VED5	ENST00000547890.5_1_12:52910884-52911722:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	588.2720947265625	2	588.272021	1174.52949	-0.16821	-9.8952E-05	-0.073519	-4.3249E-05	-0.24173	-0.0001422	588.2722419461678	50.554	0.41361	50.531	50.297	50.71	-0.02343					20	9	3	0	0	0	0.64555	1	4388	4388		44.377	7.9304	1	159770		+	406	580;577;633	297	298	563	563					-0.050794551446415426
AESWYQTKY	9	Unmodified	_AESWYQTKY_					0	0	0		ENSG00000205420|ENST00000330722|KRT6A;ENSG00000185479|ENST00000252252|KRT6B;ENSG00000170465|ENST00000252250|KRT6C;CON__P48668;CON__P04259;CON__P02538;ENST00000553087.1_1_12:52864282-52865086:-|nuORF;CON__Q8BGZ7;CON__P50446;CON__Q922U2;CON__Q5XQN5;ENST00000547890.5_1_12:52910884-52911722:-|nuORF;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000170454|ENST00000252245|KRT75;CON__O95678;ENSG00000186081|ENST00000252242|KRT5;CON__P13647;CON__Q8VED5	ENSG00000205420|ENST00000330722|KRT6A;ENST00000547890.5_1_12:52910884-52911722:-|nuORF;CON__Q8VED5	ENST00000547890.5_1_12:52910884-52911722:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	588.272021	1174.52949	-0.58233	-0.00034257	1.3648	0.00080289	0.7825	0.00046032	588.2722574198596	50.575	0.30611	50.573	50.349	50.655	-0.0020447	-0.011702	0.00050549	NaN	44.377	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88798		+	407	580;577;633	297	298							-0.050794551446415426
AESWYQTKY	9	Unmodified	_AESWYQTKY_					0	0	0		ENSG00000205420|ENST00000330722|KRT6A;ENSG00000185479|ENST00000252252|KRT6B;ENSG00000170465|ENST00000252250|KRT6C;CON__P48668;CON__P04259;CON__P02538;ENST00000553087.1_1_12:52864282-52865086:-|nuORF;CON__Q8BGZ7;CON__P50446;CON__Q922U2;CON__Q5XQN5;ENST00000547890.5_1_12:52910884-52911722:-|nuORF;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000170454|ENST00000252245|KRT75;CON__O95678;ENSG00000186081|ENST00000252242|KRT5;CON__P13647;CON__Q8VED5	ENSG00000205420|ENST00000330722|KRT6A;ENST00000547890.5_1_12:52910884-52911722:-|nuORF;CON__Q8VED5	ENST00000547890.5_1_12:52910884-52911722:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	588.272021	1174.52949	-1.4284	-0.00084028	1.6403	0.00096496	0.21194	0.00012468	588.7747314314128	50.642	0.36818	50.65	50.389	50.757	0.0077477	0.065579	0.00082964	NaN	44.377	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100340		+	408	580;577;633	297	298							-0.050794551446415426
AETERLEGW	9	Unmodified	_AETERLEGW_					0	0	0		nc|ENSG00000080845|Q9Y2H0-3|DLGAP4;nc|ENSG00000080845|Q9Y2H0-1|DLGAP4;ENSG00000080845|ENST00000339266|DLGAP4	nc|ENSG00000080845|Q9Y2H0-3|DLGAP4	nc|ENSG00000080845|Q9Y2H0-3|DLGAP4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.7587280273438	2	545.76182	1089.50909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.911	1	49.914	49.414	50.414	0.0035973								0	0	0	0.28223	1	4231	4231		37.812	1.3648	1				409	1454	298	299	564	564					-0.03208625804427356
AETGQVQKI	9	Unmodified	_AETGQVQKI_					0	0	0		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.2689208984375	2	487.269281	972.52401	-0.22717	-0.00011069	0.15177	7.3954E-05	-0.075394	-3.6737E-05	487.26928509198683	29.22	1.6355	29.177	28.715	30.35	-0.043095					107	50	3	0	0	0	0.0062975	1	1517	1517		136.27	1.4574	1	491070			410	14964	299	300	565	565					0.03664866063570571
AETGQVQKI	9	Unmodified	_AETGQVQKI_					0	0	0		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.26934814453125	2	487.269281	972.52401	-1.38	-0.00067244	1.2041	0.0005867	-0.17598	-8.5747E-05	487.2698048967584	29.28	1.924	29.261	27.915	29.839	-0.019407					106	57	3	0	0	0	0.021781	1	1460	1460		124.08	1.9041	1	505130			411	14964	299	300	566	566					0.03664866063570571
AETGSVKDF	9	Unmodified	_AETGSVKDF_					0	0	0		ENSG00000253719|ENST00000519948|ATXN7L3B	ENSG00000253719|ENST00000519948|ATXN7L3B	ENSG00000253719|ENST00000519948|ATXN7L3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	477.2325439453125	2	477.232364	952.450176	-1.7858	-0.00085224	1.644	0.00078459	-0.14176	-6.7651E-05	477.2329609751854	34.356	0.5038	34.358	34.057	34.561	0.0026054					16	10	2	0	0	0	0.75725	1	2091	2091		36.447	0.82846	1	76664			412	8865	300	301	567	567					-0.02795102098764346
AETGSVKDF	9	Unmodified	_AETGSVKDF_					0	0	0		ENSG00000253719|ENST00000519948|ATXN7L3B	ENSG00000253719|ENST00000519948|ATXN7L3B	ENSG00000253719|ENST00000519948|ATXN7L3B	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	477.232364	952.450176	-0.5064	-0.00024167	0.62894	0.00030015	0.12254	5.848E-05	477.23240868707126	34.435	0.67215	34.378	34.051	34.723	-0.056385	0.022533	-0.00019809	NaN	36.447	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65211			413	8865	300	301							-0.02795102098764346
AETHIVLLF	9	Unmodified	_AETHIVLLF_					0	0	0		ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	521.8001708984375	2	521.800217	1041.58588	-0.043464	-2.2679E-05	0.16413	8.5643E-05	0.12067	6.2963E-05	521.800132205599	77.617	0.67676	77.67	77.364	78.041	0.052704					73	30	3	0	0	0	0.19953	1	7512	7512		73.975	13.681	1	504130			414	1993	301	302	568	568					0.0667521748271156
AETHIVLLF	9	Unmodified	_AETHIVLLF_					0	0	0		ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	521.7992553710938	2	521.800217	1041.58588	0.46843	0.00024443	-0.48443	-0.00025277	-0.015998	-8.3476E-06	521.799826727523	77.483	0.79615	77.532	77.2	77.996	0.04969					79	34	3	0	0	0	0.19953	2	7578	7570;7578		73.975	3.0123	1	582130			415	1993	301	302	569;570	570					0.0667521748271156
AETHIVLLF	9	Unmodified	_AETHIVLLF_					0	0	0		ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	521.800217	1041.58588	0.36603	0.00019099	-0.33735	-0.00017603	0.028683	1.4967E-05	521.7998993312532	77.521	0.82666	77.471	77.244	78.071	-0.050789	-0.086861	-0.00011884	NaN	73.975	80	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	566060			416	1993	301	302							0.0667521748271156
AETLRPWTC	9	Unmodified	_AETLRPWTC_					0	0	0		ENST00000456943.6_1_6:2272473-2272845:+|nuORF	ENST00000456943.6_1_6:2272473-2272845:+|nuORF	ENST00000456943.6_1_6:2272473-2272845:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.326904296875	2	538.763309	1075.51206	-0.16321	-8.7933E-05	-3.5038	-0.0018877	-3.667	-0.0019757	538.7608210781982	101.08	0.32503	101.11	100.92	101.25	0.031036					11	7	2	0	0	0	0.20789	1	10766	10766		10.866	0	1	119130			417	11974	302	303	571	571					-0.02267073951270504
AETLVALFG	9	Unmodified	_AETLVALFG_					0	0	0			REV__nc|ENSG00000122490|Q8N2U9-2|SLC66A2	REV__nc|ENSG00000122490|Q8N2U9-2|SLC66A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.7561950683594	2	460.758018	919.501483	-1.3941	-0.00064235	-2.77	-0.0012763	-4.1641	-0.0019187	460.75667062926294	29.467	0.51919	29.438	29.214	29.733	-0.029207					19	11	2	0	0	0	0.67235	1	1871	1871		42.474	1.9018	1	196500	+		418	18499	303	304	572	572					0.038512666659471506
AETLVALFG	9	Unmodified	_AETLVALFG_					0	0	0			REV__nc|ENSG00000122490|Q8N2U9-2|SLC66A2	REV__nc|ENSG00000122490|Q8N2U9-2|SLC66A2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	460.758018	919.501483	0.35191	0.00016215	-4.9683	-0.0022892	-4.6164	-0.002127	460.7556407193235	29.143	0.12413	29.164	29.079	29.204	0.021946	-0.23071	-0.0010423	NaN	42.474	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24265	+		419	18499	303	304							0.038512666659471506
AETLVALFG	9	Unmodified	_AETLVALFG_					0	0	0			REV__nc|ENSG00000122490|Q8N2U9-2|SLC66A2	REV__nc|ENSG00000122490|Q8N2U9-2|SLC66A2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	460.758018	919.501483	0.28288	0.00013034	-4.9952	-0.0023016	-4.7123	-0.0021712	460.7557231917524	29.673	0.51551	29.583	29.276	29.792	-0.089544	0.18807	-0.0010671	NaN	42.474	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156520	+		420	18499	303	304							0.038512666659471506
AETPDIKLF	9	Unmodified	_AETPDIKLF_					0	0	0		ENST00000599909.1_1_19:58899504-58899627:+|nuORF;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENSG00000083845|ENST00000196551|RPS5	ENST00000599909.1_1_19:58899504-58899627:+|nuORF	ENST00000599909.1_1_19:58899504-58899627:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	517.2825927734375	2	517.281857	1032.54916	-0.048448	-2.5061E-05	0.16539	8.5552E-05	0.11694	6.0491E-05	517.28200243863	68.695	0.69174	68.718	68.372	69.064	0.022736					61	28	4	0	0	0	0.029359	4	6475	6475;6485;6496;6505		118.74	39.292	1	652270			421	1508	304	305	573;574;575;576	573					0.034189208661246084
AETPDIKLF	9	Unmodified	_AETPDIKLF_					0	0	0		ENST00000599909.1_1_19:58899504-58899627:+|nuORF;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENSG00000083845|ENST00000196551|RPS5	ENST00000599909.1_1_19:58899504-58899627:+|nuORF	ENST00000599909.1_1_19:58899504-58899627:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	517.2813720703125	2	517.281857	1032.54916	-0.32656	-0.00016892	0.3218	0.00016646	-0.0047513	-2.4578E-06	517.2820620961658	68.609	0.72226	68.573	68.271	68.994	-0.036301					49	24	3	0	0	0	0.012649	3	6630	6610;6620;6630		131.03	37.025	1	783660			422	1508	304	305	577;578;579	579					0.034189208661246084
AETPDIKLF	9	Unmodified	_AETPDIKLF_					0	0	0		ENST00000599909.1_1_19:58899504-58899627:+|nuORF;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENSG00000083845|ENST00000196551|RPS5	ENST00000599909.1_1_19:58899504-58899627:+|nuORF	ENST00000599909.1_1_19:58899504-58899627:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	517.2820434570312	2	517.281857	1032.54916	-0.38044	-0.0001968	1.1158	0.0005772	0.7354	0.00038041	517.2828164210742	68.505	1.1498	68.538	68.229	69.379	0.033005					92	47	4	0	0	0	0.029359	4	6526	6526;6534;6543;6551		118.74	31.588	1	707030			423	1508	304	305	580;581;582;583	580					0.034189208661246084
AETVALVLL	9	Unmodified	_AETVALVLL_					0	0	0			REV__ENSG00000149735|ENST00000279168|GPHA2	REV__ENSG00000149735|ENST00000279168|GPHA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7911376953125	2	464.789318	927.564084	0.19154	8.9025E-05	2.6971	0.0012536	2.8886	0.0013426	464.7904622046614	36.811	0.86831	36.91	36.514	37.382	0.099277					56	23	3	0	0	0	0.76996	1	2072	2072		33.516	8.0654	1	232950	+		424	20191	305	306	584	584					0.09740412734140591
AETVQTVRY	9	Unmodified	_AETVQTVRY_					0	0	0		ENSG00000133104|ENST00000438666|SPART;ENST00000491805.5_1_13:36878504-36886627:-|nuORF;ENST00000460126.5_1_13:36882565-36886495:-|nuORF	ENSG00000133104|ENST00000438666|SPART	ENSG00000133104|ENST00000438666|SPART	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.7796020507812	2	533.780013	1065.54547	-0.47291	-0.00025243	0.1305	6.9656E-05	-0.34241	-0.00018277	533.780039829035	38.561	0.52764	38.514	38.209	38.736	-0.047001					27	11	3	0	0	0	0.18338	1	2704	2704		77.318	27.876	1	116960			425	3855	306	307	585	585					0.015322510922942456
AETVQTVRY	9	Unmodified	_AETVQTVRY_					0	0	0		ENSG00000133104|ENST00000438666|SPART;ENST00000491805.5_1_13:36878504-36886627:-|nuORF;ENST00000460126.5_1_13:36882565-36886495:-|nuORF	ENSG00000133104|ENST00000438666|SPART	ENSG00000133104|ENST00000438666|SPART	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.7799072265625	2	533.780013	1065.54547	-1.2075	-0.00064456	0.94349	0.00050362	-0.26404	-0.00014094	533.7804679884944	38.458	0.64214	38.47	38.207	38.849	0.011173					26	14	2	0	0	0	0.44421	1	2632	2632		54.776	10.66	1	150630			426	3855	306	307	586	586					0.015322510922942456
AEVAAEKSF	9	Unmodified	_AEVAAEKSF_					0	0	0		nc|ENSG00000086589|Q9NW64-2|RBM22;ENSG00000086589|ENST00000199814|RBM22;ENST00000520132.1_1_5:150071315-150073858:-|nuORF	nc|ENSG00000086589|Q9NW64-2|RBM22	nc|ENSG00000086589|Q9NW64-2|RBM22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.2428283691406	2	476.242732	950.470912	-0.088031	-4.1924E-05	0.73368	0.00034941	0.64565	0.00030749	476.24313325710256	35.371	0.60776	35.358	35	35.608	-0.012203					30	13	3	0	0	0	0.36616	2	2191	2179;2191		60.118	3.4536	1	173620			427	1557	307	308	587;588	588					-0.006305117191004683
AEVAAEKSF	9	Unmodified	_AEVAAEKSF_					0	0	0		nc|ENSG00000086589|Q9NW64-2|RBM22;ENSG00000086589|ENST00000199814|RBM22;ENST00000520132.1_1_5:150071315-150073858:-|nuORF	nc|ENSG00000086589|Q9NW64-2|RBM22	nc|ENSG00000086589|Q9NW64-2|RBM22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.2427673339844	2	476.242732	950.470912	-0.65425	-0.00031158	0.96931	0.00046162	0.31506	0.00015004	476.2431785276278	35.429	0.79068	35.373	35.089	35.879	-0.055901					37	17	3	0	0	0	0.25415	2	2289	2289;2300		68.846	13.952	1	188550			428	1557	307	308	589;590	589					-0.006305117191004683
AEVAAEKSF	9	Unmodified	_AEVAAEKSF_					0	0	0		nc|ENSG00000086589|Q9NW64-2|RBM22;ENSG00000086589|ENST00000199814|RBM22;ENST00000520132.1_1_5:150071315-150073858:-|nuORF	nc|ENSG00000086589|Q9NW64-2|RBM22	nc|ENSG00000086589|Q9NW64-2|RBM22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.2452087402344	2	476.242732	950.470912	-1.985	-0.00094537	3.7476	0.0017848	1.7626	0.00083942	476.2448871614913	35.319	1.205	35.325	34.727	35.932	0.0063934					50	28	3	0	0	0	0.29259	2	2206	2206;2217		65.465	17.808	1	181550			429	1557	307	308	591;592	591					-0.006305117191004683
AEVAGYSPDDL	11	Unmodified	_AEVAGYSPDDL_					0	0	0		nc|ENSG00000124440|Q9Y2N7-4|HIF3A;ENST00000475432.6_1_19:46800333-46815736:+|nuORF;ENST00000528563.5_1_19:46807167-46825077:+|nuORF;nc|ENSG00000124440|Q9Y2N7-6|HIF3A;nc|ENSG00000124440|Q9Y2N7-7|HIF3A;nc|ENSG00000124440|Q9Y2N7-5|HIF3A;nc|ENSG00000124440|Q9Y2N7-3|HIF3A;ENST00000244302.8_1_19:46800333-46834596:+|nuORF;nc|ENSG00000124440|Q9Y2N7-2|HIF3A;ENSG00000124440|ENST00000377670|HIF3A	nc|ENSG00000124440|Q9Y2N7-4|HIF3A	nc|ENSG00000124440|Q9Y2N7-4|HIF3A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.853515625	2	568.758943	1135.50333	0.51967	0.00029557	-1.007	-0.00057272	-0.48729	-0.00027715	568.7595374325157	102.59	0.12563	102.79	102.69	102.81	0.19484					4	2	2	0	0	0	0.15819	1	10800	10800		35.152	3.6222	1	22991			430	3332	308	309	593	593					-0.058997691067588676
AEVEEKIDQL	10	Unmodified	_AEVEEKIDQL_					0	0	0		ENSG00000205302|ENST00000379516|SNX2;ENST00000514030.1_1_5:122153007-122163181:+|nuORF;nc|ENSG00000205302|O60749-2|SNX2	ENSG00000205302|ENST00000379516|SNX2	ENSG00000205302|ENST00000379516|SNX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.3046875	2	587.303518	1172.59248	-0.72759	-0.00042732	0.49926	0.00029322	-0.22833	-0.0001341	587.3038280969724	49.547	0.69618	50.007	49.623	50.32	0.45983					36	16	4	0	0	0	0.0068835	2	4826	4826;4838		133.99	55.73	1	1418500			431	8522	309	310	594;595	594					0.013090658527517007
AEVEEKIDQL	10	Unmodified	_AEVEEKIDQL_					0	0	0		ENSG00000205302|ENST00000379516|SNX2;ENST00000514030.1_1_5:122153007-122163181:+|nuORF;nc|ENSG00000205302|O60749-2|SNX2	ENSG00000205302|ENST00000379516|SNX2	ENSG00000205302|ENST00000379516|SNX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.3048706054688	2	587.303518	1172.59248	0.4953	0.00029089	-0.65895	-0.00038701	-0.16365	-9.6113E-05	587.3030088490269	49.368	1.087	50.213	49.43	50.517	0.845					47	26	4	0	0	0	0.00018268	2	4820	4820;4832		145.46	59.599	1	1525700			432	8522	309	310	596;597	596					0.013090658527517007
AEVEEKIEQL	10	Unmodified	_AEVEEKIEQL_					0	0	0		ENST00000560260.5_1_15:64422114-64427054:+|nuORF;nc|ENSG00000028528|Q13596-2|SNX1;ENSG00000028528|ENST00000559844|SNX1;nc|ENSG00000028528|Q13596-3|SNX1	ENST00000560260.5_1_15:64422114-64427054:+|nuORF	ENST00000560260.5_1_15:64422114-64427054:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.3095092773438	2	594.311343	1186.60813	0.055861	3.3199E-05	0.11791	7.0075E-05	0.17377	0.00010327	594.3115561543068	51.202	0.45518	51.637	51.409	51.864	0.43505					17	10	2	0	0	0	0.21012	1	5079	5079		83.647	20.113	1	768390			433	877	310	311	598	598					0.022293523697953788
AEVEEKIEQL	10	Unmodified	_AEVEEKIEQL_					0	0	0		ENST00000560260.5_1_15:64422114-64427054:+|nuORF;nc|ENSG00000028528|Q13596-2|SNX1;ENSG00000028528|ENST00000559844|SNX1;nc|ENSG00000028528|Q13596-3|SNX1	ENST00000560260.5_1_15:64422114-64427054:+|nuORF	ENST00000560260.5_1_15:64422114-64427054:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	594.311343	1186.60813	0.80878	0.00048067	-0.88226	-0.00052433	-0.073475	-4.3667E-05	594.3109647017011	51.008	0.40709	51.76	51.572	51.98	0.75174	0.061292	-0.00069174	NaN	83.647	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	830840			434	877	310	311							0.022293523697953788
AEVEGAGVKAW	11	Unmodified	_AEVEGAGVKAW_					0	0	0		ENST00000491911.5_1_9:140508423-140509541:+|nuORF;ENSG00000197070|ENST00000371421|ARRDC1	ENST00000491911.5_1_9:140508423-140509541:+|nuORF	ENST00000491911.5_1_9:140508423-140509541:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.788330078125	2	558.787838	1115.56112	-0.35045	-0.00019583	-0.066165	-3.6972E-05	-0.41662	-0.0002328	558.7878640185153	48.024	0.46621	47.999	47.759	48.226	-0.025116					16	12	2	0	0	0	0.22372	1	4048	4048		78.264	20.034	1	121060			435	8130	311	312	599	599					0.007965376093352461
AEVEGAGVKAW	11	Unmodified	_AEVEGAGVKAW_					0	0	0		ENST00000491911.5_1_9:140508423-140509541:+|nuORF;ENSG00000197070|ENST00000371421|ARRDC1	ENST00000491911.5_1_9:140508423-140509541:+|nuORF	ENST00000491911.5_1_9:140508423-140509541:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.7890625	2	558.787838	1115.56112	0.54158	0.00030263	-0.42955	-0.00024003	0.11203	6.2599E-05	558.7875248746963	48.039	0.47446	48.036	47.842	48.316	-0.002449					20	13	2	0	0	0	0.43778	1	3986	3986		56.434	13.57	1	187820			436	8130	311	312	600	600					0.007965376093352461
AEVEGAGVKAW	11	Unmodified	_AEVEGAGVKAW_					0	0	0		ENST00000491911.5_1_9:140508423-140509541:+|nuORF;ENSG00000197070|ENST00000371421|ARRDC1	ENST00000491911.5_1_9:140508423-140509541:+|nuORF	ENST00000491911.5_1_9:140508423-140509541:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	558.787838	1115.56112	-0.83448	-0.0004663	1.8097	0.0010113	0.97524	0.00054495	558.7887219219947	48.035	0.46325	48.026	47.877	48.34	-0.0093269	0.0056773	0.0017741	NaN	78.264	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134600			437	8130	311	312							0.007965376093352461
AEVETRIEAL	10	Unmodified	_AEVETRIEAL_					0	0	0		ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	566.2579345703125	2	565.806228	1129.5979	-0.061641	-3.4877E-05	0.41391	0.00023419	0.35227	0.00019932	565.8068625642426	32.256	0.34696	32.203	32.011	32.358	-0.052963					11	7	2	0	0	0	0.37624	1	1875	1875		31.53	7.0106	1	15194			438	2676	312	313	601	601					0.038287894352379226
AEVETRIEAL	10	Unmodified	_AEVETRIEAL_					0	0	0		ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	565.806228	1129.5979	0.5568	0.00031504	0.4631	0.00026202	1.0199	0.00057706	565.806417145901	32.07	0.36189	32.064	31.852	32.214	-0.0061455	-0.069785	1.8851E-05	NaN	31.53	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22926			439	2676	312	313							0.038287894352379226
AEVFLPPFL	9	Unmodified	_AEVFLPPFL_					0	0	0			REV__ENSG00000279804|ENST00000624297|PRAMEF18	REV__ENSG00000279804|ENST00000624297|PRAMEF18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7938232421875	2	516.791861	1031.56917	1.5571	0.00080467	1.545	0.00079845	3.1021	0.0016031	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.77546	1	9284	9284		31.955	1.6371	1	834930	+		440	24042	313	314	602	602					0.05464716596748076
AEVFNYREF	9	Unmodified	_AEVFNYREF_					0	0	0		ENSG00000184867|ENST00000356824|ARMCX2	ENSG00000184867|ENST00000356824|ARMCX2	ENSG00000184867|ENST00000356824|ARMCX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	587.7809448242188	2	587.780013	1173.54547	-0.71536	-0.00042048	0.24919	0.00014647	-0.46617	-0.00027401	587.7803884522533	63.836	0.42878	63.835	63.632	64.061	-0.00078583					31	16	3	0	0	0	0.19861	3	5938	5931;5938;5948		74.165	29.788	1	103490			441	7648	314	315	603;604;605	604					-0.03435748907713787
AEVFNYREF	9	Unmodified	_AEVFNYREF_					0	0	0		ENSG00000184867|ENST00000356824|ARMCX2	ENSG00000184867|ENST00000356824|ARMCX2	ENSG00000184867|ENST00000356824|ARMCX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	587.7786865234375	2	587.780013	1173.54547	0.36061	0.00021196	-0.20537	-0.00012071	0.15524	9.1246E-05	587.7799857056675	63.701	0.43349	63.667	63.461	63.895	-0.034252					29	15	2	0	0	0	0.44529	3	6045	6045;6052;6062		54.722	12.275	1	136050			442	7648	314	315	606;607;608	606					-0.03435748907713787
AEVFNYREF	9	Unmodified	_AEVFNYREF_					0	0	0		ENSG00000184867|ENST00000356824|ARMCX2	ENSG00000184867|ENST00000356824|ARMCX2	ENSG00000184867|ENST00000356824|ARMCX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	588.2853393554688	2	587.780013	1173.54547	-2.076	-0.0012202	1.9778	0.0011625	-0.098217	-5.773E-05	587.7813286876826	63.678	0.45704	63.705	63.453	63.91	0.027138					30	16	2	0	0	0	0.25415	3	5974	5960;5969;5974		68.846	11.035	1	147640			443	7648	314	315	609;610;611	611					-0.03435748907713787
AEVFPLKVF	9	Unmodified	_AEVFPLKVF_					0	0	0		ENSG00000243749|ENST00000373337|TMEM35B	ENSG00000243749|ENST00000373337|TMEM35B	ENSG00000243749|ENST00000373337|TMEM35B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.3076171875	2	525.305136	1048.59572	-0.039939	-2.098E-05	-0.25289	-0.00013285	-0.29283	-0.00015383	525.3047115245587	79.686	0.9017	79.746	79.264	80.166	0.059349					70	28	4	0	0	0	0.096131	3	7800	7782;7791;7800		93.195	32.902	1	371390			444	8814	315	316	612;613;614	614					0.07336405488081255
AEVFPLKVF	9	Unmodified	_AEVFPLKVF_					0	0	0		ENSG00000243749|ENST00000373337|TMEM35B	ENSG00000243749|ENST00000373337|TMEM35B	ENSG00000243749|ENST00000373337|TMEM35B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.306884765625	2	525.305136	1048.59572	0.60161	0.00031603	-1.0403	-0.0005465	-0.43873	-0.00023047	525.3042750171276	79.561	1.0574	79.615	79.037	80.094	0.053841					72	35	3	0	0	0	0.044173	3	7859	7859;7868;7876		110.12	58.927	1	445830			445	8814	315	316	615;616;617	615					0.07336405488081255
AEVISLKLNF	10	Unmodified	_AEVISLKLNF_					0	0	0		ENST00000383314.6_1_18:13760267-13760498:+|nuORF	ENST00000383314.6_1_18:13760267-13760498:+|nuORF	ENST00000383314.6_1_18:13760267-13760498:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3330078125	2	567.331882	1132.64921	-1.3958	-0.00079187	-1.9112	-0.0010843	-3.3069	-0.0018761	567.3306768153905	113.32	5.91	113.27	113.24	119.15	-0.044777					245	138	3	0	0	0	0.85466	1	12579	12579		20.947	1.8434	1	1691900			446	10981	316	317	618	618					0.08819158199935373
AEVLAARAP	9	Unmodified	_AEVLAARAP_					0	0	0		ENST00000401035.7_3_1:78354270-78381781:+|nuORF	ENST00000401035.7_3_1:78354270-78381781:+|nuORF	ENST00000401035.7_3_1:78354270-78381781:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.2611083984375	2	449.261259	896.507966	-0.14446	-6.49E-05	-1.6357	-0.00073486	-1.7802	-0.00079976	449.2602580863219	68.899	0.74516	68.925	68.628	69.373	0.026367					56	32	3	0	0	0	0.7932	1	6526	6526		23.042	2.5607	1	200640			447	11232	317	318	619	619					0.055572046173210765
AEVLAARAP	9	Unmodified	_AEVLAARAP_					0	0	0		ENST00000401035.7_3_1:78354270-78381781:+|nuORF	ENST00000401035.7_3_1:78354270-78381781:+|nuORF	ENST00000401035.7_3_1:78354270-78381781:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.26068115234375	2	449.261259	896.507966	-0.031705	-1.4244E-05	-1.4161	-0.00063622	-1.4478	-0.00065046	449.26046135217877	71.325	1.0336	71.873	71.284	72.317	0.54756					58	24	3	0	0	0	0.77244	1	8008	8008		32.812	3.6629	1	1233100			448	11232	317	318	620	620					0.055572046173210765
AEVLGLILRY	10	Unmodified	_AEVLGLILRY_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.8475952148438	2	573.847699	1145.68084	0.90905	0.00052166	-0.74815	-0.00042932	0.1609	9.2333E-05	573.8470302207822	84.224	0.65091	84.154	83.85	84.501	-0.069313					36	14	3	0	0	0	0.35939	1	8611	8611		67.494	31.875	1	228950			449	8866	318	319	621	621					0.11383150953906807
AEVLGLILRY	10	Unmodified	_AEVLGLILRY_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8479614257812	2	573.847699	1145.68084	0.78892	0.00045272	-0.58006	-0.00033286	0.20887	0.00011986	573.847130269326	83.972	0.69629	84.031	83.761	84.457	0.05925					34	15	3	0	0	0	0.86348	1	8475	8475		31.53	2.3598	1	227830			450	8866	318	319	622	622					0.11383150953906807
AEVLIQQGGLK	11	Unmodified	_AEVLIQQGGLK_					0	0	0		nc|ENSG00000066827|Q9P243-4|ZFAT;nc|ENSG00000066827|Q9P243-2|ZFAT;ENSG00000066827|ENST00000377838|ZFAT;ENST00000523243.5_1_8:135490727-135577256:-|nuORF	nc|ENSG00000066827|Q9P243-4|ZFAT	nc|ENSG00000066827|Q9P243-4|ZFAT	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.3381958007812	2	578.340238	1154.66592	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.459	1	57.018	56.518	57.518	0.55954								0	0	0	0.51325	1	5847	5847		65.465	5.3471	1				451	1168	319	320	623	623					0.09477659085882806
AEVPVLQIVPV	11	Unmodified	_AEVPVLQIVPV_					0	0	0		ENSG00000083093|ENST00000261584|PALB2	ENSG00000083093|ENST00000261584|PALB2	ENSG00000083093|ENST00000261584|PALB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3528442382812	2	582.355357	1162.69616	-0.84093	-0.00048972	-2.4295	-0.0014149	-3.2705	-0.0019046	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.65746	1	11399	11399		37.812	4.9991	1	77752000			452	1495	320	321	624	624					0.1213201775105972
AEYVVYSIGG	10	Unmodified	_AEYVVYSIGG_					0	0	0			REV__ENSG00000181240|ENST00000321510|SLC25A41	REV__ENSG00000181240|ENST00000321510|SLC25A41	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.265869140625	2	529.263665	1056.51278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.84	1	57.237	56.737	57.737	0.39672								0	0	0	0.45132	1	5882	5882		49.442	5.0644	1		+		453	22449	321	322	625	625					-0.013219560305515188
AFCFLGIL	8	Unmodified	_AFCFLGIL_					0	0	0		ENSG00000135956|ENST00000258439|TMEM127	ENSG00000135956|ENST00000258439|TMEM127	ENSG00000135956|ENST00000258439|TMEM127	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2410888671875	2	442.24095	882.467346	-0.15416	-6.8174E-05	0.20271	8.9649E-05	0.048558	2.1474E-05	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.88393	1	7658	7658		33.493	1.5381	1	1068200			454	4074	322	323	626	626					0.021411469733379818
AFDHEQLRA	9	Unmodified	_AFDHEQLRA_					0	0	0		nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3;ENSG00000262209|ENST00000576222|PCDHGB3	nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.7693481445312	2	543.76998	1085.52541	0.49378	0.0002685	-0.13176	-7.1647E-05	0.36202	0.00019686	543.7697480604253	22.73	0.42283	22.671	22.443	22.866	-0.05867					22	14	2	0	0	0	0.7932	1	764	764		26.693	0	1	55310			455	8932	323	324	627	627					-0.013934998476770488
AFDLDVVKL	9	Unmodified	_AFDLDVVKL_					0	0	0		ENSG00000099995|ENST00000215793|SF3A1	ENSG00000099995|ENST00000215793|SF3A1	ENSG00000099995|ENST00000215793|SF3A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.29217529296875	2	510.292225	1018.5699	0.1581	8.0679E-05	-0.39488	-0.0002015	-0.23677	-0.00012082	510.2918712292175	78.764	0.72185	79.175	78.802	79.524	0.4106					40	16	3	0	0	0	0.059135	3	9020	8993;9009;9020		104.06	8.2416	1	1825000			456	1782	324	325	628;629;630	630					0.061355112458159056
AFDLDVVKL	9	Unmodified	_AFDLDVVKL_					0	0	0		ENSG00000099995|ENST00000215793|SF3A1	ENSG00000099995|ENST00000215793|SF3A1	ENSG00000099995|ENST00000215793|SF3A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.29241943359375	2	510.292225	1018.5699	0.5219	0.00026632	-0.54121	-0.00027618	-0.019316	-9.8569E-06	510.2917782390505	78.648	1.0168	79.211	78.868	79.885	0.56332					55	23	4	0	0	0	0.039957	4	9002	9002;9010;9023;9036		112.41	19.268	1	1855500			457	1782	324	325	631;632;633;634	631					0.061355112458159056
AFDLTEQRY	9	Unmodified	_AFDLTEQRY_					0	0	0		nc|ENSG00000146872|Q86UE8-3|TLK2;ENSG00000146872|ENST00000346027|TLK2;nc|ENSG00000146872|Q86UE8|TLK2;ENST00000530992.1_1_17:32364642-32365872:-|nuORF	nc|ENSG00000146872|Q86UE8-3|TLK2;ENST00000530992.1_1_17:32364642-32365872:-|nuORF	nc|ENSG00000146872|Q86UE8-3|TLK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.7772216796875	2	571.77747	1141.54039	0.32426	0.00018541	-0.65902	-0.00037681	-0.33476	-0.00019141	571.7770350948456	54.255	0.83847	54.662	54.194	55.032	0.40663					36	19	2	0	0	0	3.7454E-20	4	5519	5497;5507;5519;5532		176.09	101.04	1	3836100			458	4867;13352	325	326	635;636;637;638	637					-0.02472052770326627
AFDLTEQRY	9	Unmodified	_AFDLTEQRY_					0	0	0		nc|ENSG00000146872|Q86UE8-3|TLK2;ENSG00000146872|ENST00000346027|TLK2;nc|ENSG00000146872|Q86UE8|TLK2;ENST00000530992.1_1_17:32364642-32365872:-|nuORF	nc|ENSG00000146872|Q86UE8-3|TLK2;ENST00000530992.1_1_17:32364642-32365872:-|nuORF	nc|ENSG00000146872|Q86UE8-3|TLK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.77734375	2	571.77747	1141.54039	-0.044263	-2.5309E-05	-0.036013	-2.0591E-05	-0.080276	-4.59E-05	571.7772922674254	54.022	0.96276	54.606	54.206	55.169	0.58474					55	22	4	0	0	0	2.0213E-05	4	5509	5488;5497;5509;5523		154.12	68.774	1	3962100			459	4867;13352	325	326	639;640;641;642	641					-0.02472052770326627
AFDPTSTLL	9	Unmodified	_AFDPTSTLL_					0	0	0		ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.7525939941406	2	482.752933	963.491313	-0.47485	-0.00022923	0.28413	0.00013717	-0.19071	-9.2068E-05	482.75302086899853	80.07	0.75984	80.597	80.275	81.035	0.52676					42	17	3	0	0	0	0.09311	2	9236	9222;9236		94.006	8.6469	1	694790			460	7556	326	327	643;644	644					0.008106589407248066
AFDPTSTLL	9	Unmodified	_AFDPTSTLL_					0	0	0		ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	482.752933	963.491313	0.34227	0.00016523	0.80669	0.00038943	1.149	0.00055466	482.75283057275874	80.518	0.59603	80.458	80.319	80.915	-0.059692	-0.094295	0.0006598	NaN	94.006	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32219			461	7556	326	327							0.008106589407248066
AFDPTSTLL	9	Unmodified	_AFDPTSTLL_					0	0	0		ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	482.752933	963.491313	0.10419	5.0298E-05	-0.1913	-9.2351E-05	-0.087112	-4.2054E-05	482.7527680048949	80.186	0.88424	80.603	80.296	81.18	0.41621	0.050072	-0.00030376	NaN	94.006	48	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	744700			462	7556	326	327							0.008106589407248066
AFDVAEREF	9	Unmodified	_AFDVAEREF_					0	0	0		nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;ENSG00000133816|ENST00000683283|MICAL2;nc|ENSG00000133816|O94851-2|MICAL2;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2	nc|ENSG00000133816|O94851|MICAL2	nc|ENSG00000133816|O94851|MICAL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	542.2610473632812	2	542.258914	1082.50327	-0.24976	-0.00013543	0.12328	6.685E-05	-0.12648	-6.8584E-05	542.2588155287823	58.332	0.57507	58.319	57.999	58.574	-0.013641					32	17	2	0	0	0	0.39367	2	5315	5308;5315		58.23	15.834	1	128640			463	14929	327	328	645;646	646					-0.034677243161013394
AFDVAEREF	9	Unmodified	_AFDVAEREF_					0	0	0		nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;ENSG00000133816|ENST00000683283|MICAL2;nc|ENSG00000133816|O94851-2|MICAL2;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2	nc|ENSG00000133816|O94851|MICAL2	nc|ENSG00000133816|O94851|MICAL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	542.2605590820312	2	542.258914	1082.50327	0.79371	0.0004304	-0.6715	-0.00036412	0.12222	6.6274E-05	542.2583053847358	58.252	0.6004	58.222	57.939	58.539	-0.029861					32	15	3	0	0	0	0.3164	3	5397	5397;5418;5430		63.534	15.618	1	177550			464	14929	327	328	647;648;649	647					-0.034677243161013394
AFDVAEREF	9	Unmodified	_AFDVAEREF_					0	0	0		nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;ENSG00000133816|ENST00000683283|MICAL2;nc|ENSG00000133816|O94851-2|MICAL2;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2	nc|ENSG00000133816|O94851|MICAL2	nc|ENSG00000133816|O94851|MICAL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	542.2606811523438	2	542.258914	1082.50327	-0.34569	-0.00018745	0.10322	5.5969E-05	-0.24248	-0.00013148	542.2588650096063	58.168	0.59996	58.202	57.951	58.551	0.033905					28	17	2	0	0	0	0.34325	3	5323	5323;5332;5340		61.691	8.7579	1	179180			465	14929	327	328	650;651;652	650					-0.034677243161013394
AFDVHLNAF	9	Unmodified	_AFDVHLNAF_					0	0	0		ENSG00000115446|ENST00000357765|UNC50	ENSG00000115446|ENST00000357765|UNC50	ENSG00000115446|ENST00000357765|UNC50	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2592163085938	2	517.258717	1032.50288	-0.10349	-5.353E-05	0.28323	0.0001465	0.17974	9.2973E-05	517.258618614138	70.954	0.79321	71.339	70.999	71.793	0.38449					42	18	3	0	0	0	0.073112	2	7893	7875;7893		99.375	27.997	1	431920			466	2845	328	329	653;654	654					-0.012070992453118379
AFDVHLNAF	9	Unmodified	_AFDVHLNAF_					0	0	0		ENSG00000115446|ENST00000357765|UNC50	ENSG00000115446|ENST00000357765|UNC50	ENSG00000115446|ENST00000357765|UNC50	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2600708007812	2	517.258717	1032.50288	-0.1479	-7.6504E-05	0.24702	0.00012777	0.099117	5.1269E-05	517.258591569596	70.9	0.85645	71.448	70.966	71.822	0.54756					49	20	3	0	0	0	0.10807	1	7893	7893		90.777	11.064	1	518490			467	2845	328	329	655	655					-0.012070992453118379
AFDVKVRPYP	10	Unmodified	_AFDVKVRPYP_					0	0	0			REV__nc|ENSG00000172890|Q6IA69-2|NADSYN1	REV__nc|ENSG00000172890|Q6IA69-2|NADSYN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.3320922851562	2	596.329673	1190.64479	2.639	0.0015737	2.6396	0.001574	5.2785	0.0031477	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.64457	1	10272	10272		47.657	14.845	1	1305600	+		468	21862	329	330	656	656					0.05709693777043867
AFFAKMVV	8	Oxidation (M)	_AFFAKM(Oxidation (M))VV_		AFFAKM(1)VV		AFFAKM(55)VV	0	0	1		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7496032714844	2	464.751682	927.48881	-0.27404	-0.00012736	3.9505	0.001836	3.6764	0.0017086	464.75359999494833	29.712	0.6353	29.669	29.38	30.015	-0.043095					21	16	2	0	0	0	0.94132	1	1559	1559		54.765	10.234	1	35391			469	4039	330	331	657	657					0.02216532002069016
AFFCGLLI	8	Unmodified	_AFFCGLLI_					0	0	0		ENSG00000127995|ENST00000297273|CASD1	ENSG00000127995|ENST00000297273|CASD1	ENSG00000127995|ENST00000297273|CASD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24102783203125	2	442.24095	882.467346	-1.2774	-0.00056493	1.3083	0.00057857	0.030858	1.3647E-05	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.88393	1	7515	7515		33.493	2.9893	1	716910			470	3523	331	332	658	658					0.02141146973360719
AFFLLLVITSK	11	Unmodified	_AFFLLLVITSK_					0	0	0		ENST00000569830.1_1_15:42840055-42840904:-|nuORF	ENST00000569830.1_1_15:42840055-42840904:-|nuORF	ENST00000569830.1_1_15:42840055-42840904:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3831787109375	2	626.389199	1250.76385	-1.2034	-0.00075382	-3.9354	-0.0024651	-5.1388	-0.0032189	626.8888030081564	111.11	0.29986	111.11	110.9	111.2	-0.0074387					18	12	2	0	0	0	0.17564	1	11844	11844		27.882	18.699	1	76236			471	13986	332	333	659	659					0.1484946768187001
AFFPILTY	8	Unmodified	_AFFPILTY_					0	0	0		ENSG00000091137|ENST00000644269|SLC26A4	ENSG00000091137|ENST00000644269|SLC26A4	ENSG00000091137|ENST00000644269|SLC26A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2672119140625	2	486.265479	970.516405	-1.0662	-0.00051845	4.4494	0.0021636	3.3832	0.0016451	486.2675130911451	84.089	3.5556	84.089	81.847	85.402	0					191	86	3	0	0	0	0.86791	1	7863	7863		28.254	1.4582	1	458040			472	1669	333	334	660	660					0.02996758533947741
AFFRKGGG	8	Unmodified	_AFFRKGGG_					0	0	0		ENSG00000149451|ENST00000356518|ADAM33;nc|ENSG00000149451|Q9BZ11-2|ADAM33	ENSG00000149451|ENST00000356518|ADAM33	ENSG00000149451|ENST00000356518|ADAM33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2275085449219	2	420.229762	838.444972	-1.7925	-0.00075327	-2.6269	-0.0011039	-4.4195	-0.0018572	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.89457	1	7528	7528		37.028	1.8278	1	831720			473	5026	334	335	661	661					0.019286836199626123
AFGIIFLC	8	Unmodified	_AFGIIFLC_					0	0	0		ENST00000318217.9_1_17:30821488-30821716:-|nuORF	ENST00000318217.9_1_17:30821488-30821716:-|nuORF	ENST00000318217.9_1_17:30821488-30821716:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24090576171875	2	442.24095	882.467346	-1.5813	-0.00069932	1.5617	0.00069064	-0.019637	-8.6844E-06	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.91333	1	7896	7896		43.626	13.785	1	968500			474	10004	335	336	662	662					0.021411469733493504
AFICRKHRIQR	11	Unmodified	_AFICRKHRIQR_					0	0	0		ENSG00000115084|ENST00000245680|SLC35F5;ENST00000469702.5_1_2:114462911-114480749:-|nuORF	ENSG00000115084|ENST00000245680|SLC35F5	ENSG00000115084|ENST00000245680|SLC35F5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6240234375	3	476.61034	1426.80919	2.8114	0.0013399	-3.5243	-0.0016797	-0.71295	-0.0003398	476.60867314599324	107.89	0.1106	107.86	107.77	107.88	-0.031487					4	2	2	0	0	0	0.181	1	11973	11973		9.2118	0	1	1029100			475	2811	336	337	663	663					0.11285807715989904
AFKDKNIDV	9	Unmodified	_AFKDKNIDV_					0	0	0			REV__ENSG00000248144|ENST00000515683|ADH1C	REV__ENSG00000248144|ENST00000515683|ADH1C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.2869262695312	2	525.284931	1048.55531	-0.071523	-3.757E-05	3.7768	0.0019839	3.7053	0.0019463	525.2868805329866	54.778	0.49473	54.752	54.397	54.892	-0.025955					27	15	2	0	0	0	0.71772	1	4960	4960		39.253	1.4413	1	87852	+		476	22943	337	338	664	664					0.032974390976505674
AFKKDLEKK	9	Unmodified	_AFKKDLEKK_					0	0	0		ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000605810.1_1_3:70174691-70175321:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8297729492188	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.78536	1	8685	8685		29.15	5.6269	1	1181400			477	14435	338	339	665	665					0.10094577919790026
AFKREPKG	8	Unmodified	_AFKREPKG_					0	0	0			REV__ENSG00000234602|ENST00000513312|MCIDAS	REV__ENSG00000234602|ENST00000513312|MCIDAS	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.7677001953125	2	466.769252	931.52395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.384	1	75.516	75.016	76.016	0.13208								0	0	0	0.29703	1	7012	7012		37.159	1.5408	1		+		478	23779	339	340	666	666					0.05544910854234786
AFKTRWLRG	9	Unmodified	_AFKTRWLRG_					0	0	0			REV__nc|ENSG00000147889|P42771-3|CDKN2A	REV__nc|ENSG00000147889|P42771-3|CDKN2A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.82470703125	2	567.830175	1133.6458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.38	1	118.29	117.79	118.79	-0.088509								0	0	0	0.30778	1	12761	12761		27.882	7.8855	1		+		479	29921	340	341	667	667					0.08431952936575726
AFLIQFLISR	10	Unmodified	_AFLIQFLISR_					0	0	0			REV__nc|ENSG00000135298|O60242-2|ADGRB3	REV__nc|ENSG00000135298|O60242-2|ADGRB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.366455078125	2	604.363516	1206.71248	3.6458	0.0022034	1.558	0.00094162	5.2038	0.003145	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.86338	1	12728	12728		34.173	3.8548	1	5883900	+		480	19205	341	342	668	668					0.11739143707836774
AFLSVRVLAT	10	Unmodified	_AFLSVRVLAT_					0	0	0		ENSG00000179921|ENST00000519574|GPBAR1	ENSG00000179921|ENST00000519574|GPBAR1	ENSG00000179921|ENST00000519574|GPBAR1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8297729492188	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.6	1	118.57	118.07	119.07	-0.024208								0	0	0	0.45132	1	13139	13139		19.104	0.77911	1				481	7305	342	343	669	669					0.10418595265377917
AFMAFIAL	8	Unmodified	_AFMAFIAL_					0	0	0		ENSG00000165794|ENST00000298681|SLC39A2	ENSG00000165794|ENST00000298681|SLC39A2	ENSG00000165794|ENST00000298681|SLC39A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2408447265625	2	442.24095	882.467346	1.3093	0.00057901	-1.4244	-0.00062995	-0.11518	-5.0939E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.88393	1	8293	8293		33.493	0.68056	1	1244000			482	6123	343	344	670	670					0.021411469733379818
AFPALSVCMKR	11	Unmodified	_AFPALSVCMKR_					0	0	0		ENST00000509517.1_1_4:146067334-146072008:-|nuORF	ENST00000509517.1_1_4:146067334-146072008:-|nuORF	ENST00000509517.1_1_4:146067334-146072008:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.2188415527344	3	408.21935	1221.63622	0.17587	7.1792E-05	-0.34056	-0.00013902	-0.16469	-6.723E-05	408.21914470372116	38.883	0.50087	38.971	38.754	39.255	0.088375					23	13	3	0	0	0	0.67041	1	2343	2343		36.318	3.5671	1	169400			483	12991	344	345	671	671					0.034266805445440696
AFPRAGAPP	9	Unmodified	_AFPRAGAPP_					0	0	0		ENSG00000235608|ENST00000422806|NKX1-1	ENSG00000235608|ENST00000422806|NKX1-1	ENSG00000235608|ENST00000422806|NKX1-1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2406921386719	2	442.24287	882.471186	-1.2774	-0.00056493	-3.033	-0.0013413	-4.3104	-0.0019063	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.76402	1	7727	7727		35.201	1.6851	1	716910			484	8750	345	346	672	672					0.025249527914184
AFPRLRIPRTP	11	Unmodified	_AFPRLRIPRTP_					0	0	0		ENST00000434578.6_2_1:15480274-15537010:+|nuORF;ENST00000400796.7_1_1:15480274-15541469:+|nuORF	ENST00000434578.6_2_1:15480274-15537010:+|nuORF	ENST00000434578.6_2_1:15480274-15537010:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.9390869140625	3	441.938451	1322.79352	0.63201	0.00027931	2.4685	0.0010909	3.1005	0.0013702	441.93938161315157	55.264	1.2271	55.292	54.682	55.909	0.027142					77	31	3	0	0	0	0.76892	1	4922	4922		17.833	1.8264	1	422510			485	11228	346	347	673	673					0.14503844470573313
AFPRVKPAP	9	Unmodified	_AFPRVKPAP_					0	0	0		ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.2966613769531	2	491.795269	981.575986	-0.41148	-0.00020237	1.3216	0.00064997	0.91013	0.0004476	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.7932	1	4516	4516		24.203	0	1	887820			486	4651	347	348	674	674					0.08446074267988024
AFPVPASRL	9	Unmodified	_AFPVPASRL_					0	0	0		ENST00000463734.1_1_20:25204590-25206148:+|nuORF	ENST00000463734.1_1_20:25204590-25206148:+|nuORF	ENST00000463734.1_1_20:25204590-25206148:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.277587890625	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.74721	1	8417	8417		37.159	1.5408	1	7438100			487	12074	348	349	675	675					0.0643408151404401
AFPVPASRL	9	Unmodified	_AFPVPASRL_					0	0	0		ENST00000463734.1_1_20:25204590-25206148:+|nuORF	ENST00000463734.1_1_20:25204590-25206148:+|nuORF	ENST00000463734.1_1_20:25204590-25206148:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2777099609375	2	479.279452	956.544351	0.29447	0.00014113	-4.2782	-0.0020505	-3.9838	-0.0019093	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.74721	1	9763	9763		37.159	2.0071	1	5642300			488	12074	348	349	676	676					0.0643408151404401
AFQAAKIITY	10	Unmodified	_AFQAAKIITY_					0	0	0		ENSG00000169418|ENST00000368680|NPR1	ENSG00000169418|ENST00000368680|NPR1	ENSG00000169418|ENST00000368680|NPR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.3182373046875	2	563.318774	1124.623	-1.0735	-0.0006047	-2.958	-0.0016663	-4.0315	-0.002271	563.8174777116847	55.775	1.0022	55.775	55.238	56.24	0					49	27	4	0	0	0	0.8651	1	4738	4738		25.574	1.0549	1	74923			489	6496	349	350	677	677					0.06566889028476908
AFRAMEKLQ	9	Unmodified	_AFRAMEKLQ_					0	0	0		ENSG00000188770|ENST00000367222|OPTC;chr1:203499851-203502914|20|22.35|0.15|7.19|+|0|OPTC,OPTC|1	ENSG00000188770|ENST00000367222|OPTC	ENSG00000188770|ENST00000367222|OPTC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.2938842773438	2	547.294776	1092.575	-1.5255	-0.00083492	-1.6325	-0.00089348	-3.1581	-0.0017284	547.2937699430398	60.219	0.68533	60.61	60.175	60.86	0.39077					30	18	2	0	0	0	0.64555	1	6385	6385		44.377	0.26039	1	514200			490	7957	350	351	678	678					0.032414918367749124
AFRKFTSA	8	Unmodified	_AFRKFTSA_					0	0	0		nc|ENSG00000145242|P54756-3|EPHA5;nc|ENSG00000145242|P54756-2|EPHA5;ENSG00000145242|ENST00000613740|EPHA5;nc|ENSG00000145242|P54756|EPHA5;ENST00000492403.1_1_7:100403981-100405169:-|nuORF;ENST00000487222.5_1_7:100401085-100421908:-|nuORF;ENSG00000196411|ENST00000358173|EPHB4	nc|ENSG00000145242|P54756-3|EPHA5	nc|ENSG00000145242|P54756-3|EPHA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.25335693359375	2	464.255977	926.497401	-0.76573	-0.00035549	-3.3334	-0.0015476	-4.0992	-0.0019031	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.87922	1	9657	9657		31.955	2.8053	1	1046600			491	4757	351	352	679	679					0.03121221962896925
AFRKWKSH	8	Unmodified	_AFRKWKSH_					0	0	0		nc|ENSG00000054523|O60333-2|KIF1B;ENSG00000054523|ENST00000676179|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.29345703125	2	530.295968	1058.57738	-0.73574	-0.00039016	-4.0806	-0.0021639	-4.8163	-0.0025541	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.92973	1	8943	8943		50.025	11.003	1	1390700			492	1020	352	353	680	680					0.05043708356743082
AFRRPFPPRKR	11	Unmodified	_AFRRPFPPRKR_					0	0	0		ENST00000310837.8_1_17:39845180-39847075:+|nuORF	ENST00000310837.8_1_17:39845180-39847075:+|nuORF	ENST00000310837.8_1_17:39845180-39847075:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6233215332031	3	476.621345	1426.8422	2.8112	0.0013399	2.1187	0.0010098	4.9299	0.0023497	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.76251	1	12848	12848		19.263	0	1	2689700			493	9912	353	354	681	681					0.14585757830332113
AFRSYKIK	8	Unmodified	_AFRSYKIK_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.79888916015625	2	506.800552	1011.58655	0.2762	0.00013998	0.32684	0.00016564	0.60304	0.00030562	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.81897	1	3653	3653		20.947	1.587	1	416790	+		494	21204	354	355	682	682					0.08122056922422871
AFSGKLKSIY	10	Unmodified	_AFSGKLKSIY_					0	0	0			REV__ENST00000503051.1_1_4:53527397-53527544:+|nuORF	REV__ENST00000503051.1_1_4:53527397-53527544:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.3154907226562	2	557.318774	1112.623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.397	1	91.397	90.897	91.897	0								0	0	0	0.45132	1	8932	8932		16.473	2.336	1		+		495	27836	355	356	683	683					0.07118889028470221
AFSRKLIHVPE	11	Unmodified	_AFSRKLIHVPE_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.8720092773438	2	648.874779	1295.73501	-0.0025716	-1.6686E-06	-4.3371	-0.0028142	-4.3396	-0.0028159	648.8719439244529	99.494	2.1461	99.535	98.831	100.98	0.041107					134	49	3	0	0	0	0.57736	1	10513	10513		46.457	8.6453	1	250130	+		496	16090	356	357	684	684					0.09896743105468886
AFTEVTQTELQ	11	Unmodified	_AFTEVTQTELQ_					0	0	0		ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404-1|TMC4;nc|ENSG00000167608|Q7Z404|TMC4	ENSG00000167608|ENST00000619895|TMC4	ENSG00000167608|ENST00000619895|TMC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8194580078125	2	633.81425	1265.61395	0.70689	0.00044804	0.42655	0.00027035	1.1334	0.00071839	633.8144115659621	75.62	0.84026	75.753	75.398	76.239	0.13326					67	23	4	0	0	0	0.71207	1	7070	7070		14.137	0	1	311410			497	6306	357	358	685	685					-0.008235491185359933
AFTVVIAS	8	Unmodified	_AFTVVIAS_					0	0	0		ENSG00000168575|ENST00000520262|SLC20A2	ENSG00000168575|ENST00000520262|SLC20A2	ENSG00000168575|ENST00000520262|SLC20A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.23162841796875	2	404.234179	806.453805	0.88498	0.00035774	-4.1951	-0.0016958	-3.3101	-0.0013381	404.2323708520731	84.87	3.8747	85.31	83.261	87.136	0.43967					162	94	4	0	0	0	0.86288	1	9914	9914		26.796	3.7594	1	2366300			498	6414	358	359	686	686					0.04283612465769693
AFVQFLILIMA	11	Unmodified	_AFVQFLILIMA_					0	0	0			REV__ENST00000505104.5_1_4:9882098-10027590:-|nuORF	REV__ENST00000505104.5_1_4:9882098-10027590:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.37060546875	2	633.369952	1264.72535	1.4675	0.00092945	-2.8665	-0.0018155	-1.399	-0.00088608	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.6493	1	9757	9757		29.15	0	1	5460600	+		499	27875	359	360	687	687					0.10357838775735217
AFVQFLILIMA	11	Unmodified	_AFVQFLILIMA_					0	0	0			REV__ENST00000505104.5_1_4:9882098-10027590:-|nuORF	REV__ENST00000505104.5_1_4:9882098-10027590:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.36865234375	2	633.369952	1264.72535	1.4714	0.00093196	-2.7563	-0.0017457	-1.2848	-0.00081376	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.73621	1	10243	10243		21.96	7.095	1	11430000	+		500	27875	359	360	688	688					0.10357838775735217
AFVQFLILIMA	11	Unmodified	_AFVQFLILIMA_					0	0	0			REV__ENST00000505104.5_1_4:9882098-10027590:-|nuORF	REV__ENST00000505104.5_1_4:9882098-10027590:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3685302734375	2	633.369952	1264.72535	0.88638	0.00056141	-2.2645	-0.0014343	-1.3781	-0.00087286	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.67493	1	9807	9807		35.618	2.8059	1	5166300	+		501	27875	359	360	689	689					0.10357838775735217
AFVQFLILIMA	11	Unmodified	_AFVQFLILIMA_					0	0	0			REV__ENST00000505104.5_1_4:9882098-10027590:-|nuORF	REV__ENST00000505104.5_1_4:9882098-10027590:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3689575195312	2	633.369952	1264.72535	1.5936	0.0010093	-2.7128	-0.0017182	-1.1192	-0.00070885	633.3681450827713	95.612	2.2846	96.032	94.734	97.018	0.41963					200	55	4	0	0	0	0.57736	3	11517	11468;11492;11517		29.15	7.8518	1	3838500	+		502	27875	359	360	690;691;692	692					0.10357838775735217
AFVSGRGL	8	Unmodified	_AFVSGRGL_					0	0	0		ENST00000590399.1_1_19:11485348-11485594:-|nuORF	ENST00000590399.1_1_19:11485348-11485594:-|nuORF	ENST00000590399.1_1_19:11485348-11485594:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.7308654785156	2	403.729595	805.444637	1.7257	0.0006967	0.41632	0.00016808	2.142	0.00086478	403.7296654256628	99.693	1.8198	100.06	99.055	100.87	0.36292					95	45	3	0	0	0	0.80706	1	12105	12105		19.36	1.0356	1	752370			503	14257	360	361	693	693					0.03413263900097263
AFWLASAFCIF	11	Unmodified	_AFWLASAFCIF_					0	0	0		ENSG00000136856|ENST00000373371|SLC2A8	ENSG00000136856|ENST00000373371|SLC2A8	ENSG00000136856|ENST00000373371|SLC2A8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	638.3159790039062	2	638.315177	1274.6158	1.2406	0.0007919	1.1095	0.0007082	2.3501	0.0015001	638.3157834446171	71.864	1.5253	72.415	72.071	73.597	0.55009					104	36	5	0	0	0	0.53495	1	8079	8079		49.442	1.5259	1	7237600			504	4144	361	362	694	694					-0.010521668436240361
AFYPLLIRFV	10	Unmodified	_AFYPLLIRFV_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8694458007812	2	619.868434	1237.72232	-1.2246	-0.00075908	2.6155	0.0016212	1.3909	0.00086215	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.86305	1	9567	9567		31.955	5.2619	1	3118800			505	8298	362	363	695	695					0.11296331713219843
AGAAGMKRAM	10	Unmodified	_AGAAGMKRAM_					0	0	0		nc|ENSG00000104892|Q6P597-2|KLC3;ENSG00000104892|ENST00000391946|KLC3;nc|ENSG00000104892|Q6P597-3|KLC3	nc|ENSG00000104892|Q6P597-2|KLC3	nc|ENSG00000104892|Q6P597-2|KLC3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.2457580566406	2	482.246772	962.478991	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.788	1	21.159	20.659	21.659	-0.62835								0	0	0	0.45132	1	827	827		27.882	0	1				506	2163	363	364	696	696					-0.003749792749658809
AGAASPHPP	9	Unmodified	_AGAASPHPP_					0	0	0		ENSG00000148704|ENST00000369206|VAX1	ENSG00000148704|ENST00000369206|VAX1	ENSG00000148704|ENST00000369206|VAX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.70538330078125	2	402.703577	803.392602	1.6104	0.00064852	3.1455	0.0012667	4.7559	0.0019152	402.7048140873336	25.264	0.87722	24.936	24.476	25.353	-0.32825					41	19	4	0	0	0	0.67235	1	1310	1310		42.474	3.6683	1	275430			507	4980	364	365	697	697					-0.016958995136747035
AGADERHG	8	Unmodified	_AGADERHG_					0	0	0			REV__ENST00000549044.5_1_14:105684030-105684126:-|nuORF	REV__ENST00000549044.5_1_14:105684030-105684126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.6875	2	406.685916	811.357279	2.7533	0.0011197	2.1364	0.00086886	4.8898	0.0019886	406.6868857776059	28.706	1.001	28.686	28.167	29.168	-0.019407					47	28	2	0	0	0	0.87479	1	1392	1392		30.504	3.7075	1	76555	+		508	28582	365	366	698	698					-0.05594562041471818
AGALGPVPR	9	Unmodified	_AGALGPVPR_					0	0	0			REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.25048828125	2	419.250695	836.486836	1.312	0.00055007	-1.2879	-0.00053996	0.024104	1.0106E-05	419.2500422935716	23.688	1.1551	23.114	22.664	23.819	-0.57415					40	26	2	0	0	0	0.7932	1	1128	1128		24.203	3.7209	1	1428200	+		509	27775	366	367	699	699					0.06205239308462751
AGALLPLLLL	10	Unmodified	_AGALLPLLLL_					0	0	0			REV__nc|ENSG00000231852|P08686-2|CYP21A2	REV__nc|ENSG00000231852|P08686-2|CYP21A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.2896423339844	2	497.338978	992.663404	-0.21475	-0.0001068	-3.0377	-0.0015108	-3.2524	-0.0016176	497.3372849983585	72.392	1.641	72.943	72.071	73.712	0.55009					59	39	2	0	0	0	0.37624	1	8033	8033		44.531	9.3304	1	165800	+		510	23764	367	368	700	700					0.16677855418913623
AGALLPLLLL	10	Unmodified	_AGALLPLLLL_					0	0	0			REV__nc|ENSG00000231852|P08686-2|CYP21A2	REV__nc|ENSG00000231852|P08686-2|CYP21A2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	497.338978	992.663404	-1.5268	-0.00075935	-1.9913	-0.00099034	-3.5181	-0.0017497	497.33792267208344	72.65	0.57858	73.036	72.875	73.454	0.38582	0.046765	0.00071104	NaN	44.531	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94069	+		511	23764	367	368							0.16677855418913623
AGDDAPRAVF	10	Unmodified	_AGDDAPRAVF_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.7507629394531	2	509.751256	1017.48796	-1.5066	-0.000768	1.1842	0.00060364	-0.32243	-0.00016436	509.75170848529905	45.508	0.60259	45.508	45.213	45.815	0					32	14	3	0	0	0	0.2575	1	3360	3360		77.318	22.541	1	141490			512	1338;8080;2370;12043;8106	368	369	701	701					-0.020085911132923684
AGDDAPRAVF	10	Unmodified	_AGDDAPRAVF_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.7513122558594	2	509.751256	1017.48796	0.2369	0.00012076	-1.0124	-0.00051609	-0.77553	-0.00039533	509.750651484147	45.627	0.8247	45.608	45.187	46.011	-0.018585					41	19	3	0	0	0	0.4503	2	3618	3607;3618		59.931	15.814	1	299200			513	1338;8080;2370;12043;8106	368	369	702;703	703					-0.020085911132923684
AGDDAPRAVF	10	Unmodified	_AGDDAPRAVF_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.7508850097656	2	509.751256	1017.48796	-0.69062	-0.00035204	-0.044417	-2.2641E-05	-0.73504	-0.00037469	509.7510305996481	45.604	0.73212	45.573	45.278	46.01	-0.031067					29	16	2	0	0	0	0.31985	1	3701	3701		70.816	20.792	1	346550			514	1338;8080;2370;12043;8106	368	369	704	704					-0.020085911132923684
AGDDAPRAVF	10	Unmodified	_AGDDAPRAVF_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.75048828125	2	509.751256	1017.48796	-0.72541	-0.00036978	0.041305	2.1055E-05	-0.6841	-0.00034872	509.75104021431855	45.601	0.68941	45.596	45.23	45.92	-0.0041618					27	15	2	0	0	0	0.78666	1	3646	3646		40.058	3.0297	1	312100			515	1338;8080;2370;12043;8106	368	369	705	705					-0.020085911132923684
AGDDAPRAVF	10	Unmodified	_AGDDAPRAVF_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.7509765625	2	509.751256	1017.48796	-0.45557	-0.00023223	0.016217	8.2668E-06	-0.43935	-0.00022396	509.7511381869462	45.568	0.80136	45.58	45.28	46.081	0.012058					37	21	2	0	0	0	0.18075	4	3301	3282;3292;3301;3313		90.601	23.159	1	640980			516	1338;8080;2370;12043;8106	368	369	706;707;708;709	708					-0.020085911132923684
AGDDAPRAVF	10	Unmodified	_AGDDAPRAVF_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.7516784667969	2	509.751256	1017.48796	0.31437	0.00016025	-0.61284	-0.0003124	-0.29847	-0.00015215	509.75081559048897	45.516	0.79434	45.558	45.194	45.988	0.042595					49	20	3	0	0	0	0.099622	5	3299	3268;3278;3289;3299;3307		101.25	32.768	1	588560			517	1338;8080;2370;12043;8106	368	369	710;711;712;713;714	713					-0.020085911132923684
AGDDAPRAVF	10	Unmodified	_AGDDAPRAVF_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.7506103515625	2	509.751256	1017.48796	-0.073881	-3.7661E-05	-0.40112	-0.00020447	-0.475	-0.00024213	509.7510132152501	45.568	0.89594	45.5	44.978	45.874	-0.068634					51	22	3	0	0	0	0.099622	5	3296	3267;3275;3286;3296;3306		101.25	33.887	1	501090			518	1338;8080;2370;12043;8106	368	369	715;716;717;718;719	718					-0.020085911132923684
AGDDAPRAVF	10	Unmodified	_AGDDAPRAVF_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7508544921875	2	509.751256	1017.48796	-0.46542	-0.00023725	-0.49589	-0.00025278	-0.9613	-0.00049003	509.750908482462	44.623	0.5604	45.086	44.825	45.385	0.46313					33	13	3	0	0	0	0.064179	2	4109	4096;4109		106.68	24.378	1	1199400			519	1338;8080;2370;12043;8106	368	369	720;721	721					-0.020085911132923684
AGDDAPRAVF	10	Unmodified	_AGDDAPRAVF_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.7503662109375	2	509.751256	1017.48796	-0.50293	-0.00025637	-0.70936	-0.0003616	-1.2123	-0.00061797	509.750724610948	44.434	0.55835	45.278	45.027	45.585	0.84438					31	13	3	0	0	0	0.18075	2	4102	4091;4102		90.601	19.433	1	1188300			520	1338;8080;2370;12043;8106	368	369	722;723	723					-0.020085911132923684
AGDHSAASH	9	Unmodified	_AGDHSAASH_					0	0	0			REV__nc|ENSG00000285975|A6NNJ1|FAM90A9	REV__nc|ENSG00000285975|A6NNJ1|FAM90A9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7746887207031	2	426.683373	851.352193	-0.89461	-0.00038171	-0.011849	-5.0556E-06	-0.90646	-0.00038677	426.6836434733585	38.91	1.3283	39.464	39.069	40.397	0.55449					61	30	3	0	0	0	0.20789	1	3193	3193		15.642	0	1	458240	+		521	30221	369	370	724	724					-0.07942865904101382
AGDKVKKLRNK	11	Unmodified	_AGDKVKKLRNK_					0	0	0			REV__nc|ENSG00000133858|O60293-2|ZFC3H1	REV__nc|ENSG00000133858|O60293-2|ZFC3H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.5997619628906	3	419.598094	1255.77245	0.96458	0.00040474	2.9043	0.0012187	3.8689	0.0016234	419.5991830900443	24.354	1.3422	23.972	23.576	24.918	-0.38178					72	27	4	0	0	0	0.59499	1	1182	1182		45.022	7.2107	1	726260	+		522	19099	370	371	725	725					0.15479834371058132
AGEEEEKKKQK	11	Unmodified	_AGEEEEKKKQK_					0	0	0		ENSG00000139726|ENST00000280557|DENR	ENSG00000139726|ENST00000280557|DENR	ENSG00000139726|ENST00000280557|DENR	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.24237060546875	3	435.233258	1302.67794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.786	1	16.299	15.799	16.799	-0.48718								0	0	0	0.56276	1	176	176		43.651	3.7776	1				523	4394	371	372	726	726					0.038712310384198645
AGEERHLLVL	10	Unmodified	_AGEERHLLVL_					0	0	0			REV__nc|ENSG00000032444|Q8IY17-5|PNPLA6	REV__nc|ENSG00000032444|Q8IY17-5|PNPLA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.3267211914062	2	568.824755	1135.63496	-1.1701	-0.00066558	4.3804	0.0024917	3.2103	0.0018261	568.8271687534636	65.091	0.44598	65.095	64.817	65.263	0.0046997					21	12	2	0	0	0	0.80179	1	6117	6117		39.253	2.8061	1	101620	+		524	16278	372	373	727	727					0.07256505771670163
AGEHLLLG	8	Unmodified	_AGEHLLLG_					0	0	0		nc|ENSG00000101076|P41235-7|HNF4A;nc|ENSG00000164749|Q14541|HNF4G;nc|ENSG00000101076|P41235-3|HNF4A;nc|ENSG00000101076|P41235-6|HNF4A;nc|ENSG00000164749|Q14541-2|HNF4G;ENSG00000101076|ENST00000316673|HNF4A;ENSG00000164749|ENST00000396423|HNF4G;nc|ENSG00000101076|P41235-2|HNF4A;ENST00000372920.1_1_20:43030124-43058302:+|nuORF;nc|ENSG00000101076|P41235|HNF4A;nc|ENSG00000101076|P41235-4|HNF4A	nc|ENSG00000101076|P41235-7|HNF4A	nc|ENSG00000101076|P41235-7|HNF4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.2295227050781	2	405.229428	808.444303	-0.99102	-0.00040159	0.71353	0.00028915	-0.27749	-0.00011245	405.22969449204066	47.476	0.86224	48.399	48.081	48.944	0.92315					46	21	3	0	0	0	0.45589	1	4545	4545		77.944	0	1	2330300			525	1896	373	374	728	728					0.03241844180251974
AGEKPVLRVKK	11	Unmodified	_AGEKPVLRVKK_					0	0	0			REV__ENSG00000051009|ENST00000449352|FHIP1B	REV__ENSG00000051009|ENST00000449352|FHIP1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.9307556152344	3	408.931073	1223.77139	0.81834	0.00033464	0.0011206	4.5826E-07	0.81946	0.0003351	408.93080567410726	28.489	0.95832	28.316	27.801	28.76	-0.17336					45	23	3	0	0	0	0.69687	1	1729	1729		32.034	1.7164	1	179820	+		526	16380	374	375	729	729					0.16845620002163741
AGELTPEEE	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AGELTPEEE_					1	0	0		ENSG00000178372|ENST00000380332|CALML5	ENSG00000178372|ENST00000380332|CALML5	ENSG00000178372|ENST00000380332|CALML5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.7236022949219	2	508.724569	1015.43459	-0.2659	-0.00013527	0.14512	7.3827E-05	-0.12078	-6.1444E-05	508.7242604060005	66.654	0.53251	66.619	66.435	66.968	-0.03521					39	22	2	0	0	0	0.51307	1	6393	6393		51.335	8.861	1	110030			527	7201	375	376	730	730					-0.07251433406463548
AGELTPEEEAQ	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AGELTPEEEAQ_					1	0	0		ENSG00000178372|ENST00000380332|CALML5	ENSG00000178372|ENST00000380332|CALML5	ENSG00000178372|ENST00000380332|CALML5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.275390625	2	608.272415	1214.53028	-0.13544	-8.2382E-05	0.07859	4.7804E-05	-0.056846	-3.4578E-05	608.2723799472808	67.086	0.59251	67.05	66.747	67.34	-0.035698					64	27	3	0	0	0	0.37012	2	6438	6421;6438		61.691	15.234	1	197880			528	7201	376	377	731;732	732					-0.06840705286231241
AGELTPEEEAQ	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AGELTPEEEAQ_					1	0	0		ENSG00000178372|ENST00000380332|CALML5	ENSG00000178372|ENST00000380332|CALML5	ENSG00000178372|ENST00000380332|CALML5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.2745971679688	2	608.272415	1214.53028	-1.3557	-0.00082464	1.4167	0.00086172	0.060948	3.7073E-05	608.273212366521	66.999	0.61171	67.027	66.721	67.332	0.02858					64	29	3	0	0	0	0.638	1	6362	6362		40.058	6.1365	1	210580			529	7201	376	377	733	733					-0.06840705286231241
AGEPIVEVLKW	11	Unmodified	_AGEPIVEVLKW_					0	0	0			REV__nc|ENSG00000145996|Q5VV42-2|CDKAL1	REV__nc|ENSG00000145996|Q5VV42-2|CDKAL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.93243408203125	3	414.236051	1239.68632	0.17337	7.1818E-05	-0.12675	-5.2505E-05	0.046623	1.9313E-05	414.23543822742425	43.694	0.65781	43.667	43.317	43.974	-0.026768					40	15	4	0	0	0	0.17334	1	3352	3352		34.087	0.16487	1	140590	+		530	19980	377	378	734	734					0.07606829745691357
AGFKKKSN	8	Unmodified	_AGFKKKSN_					0	0	0			REV__nc|ENSG00000132872|Q9H2B2-2|SYT4	REV__nc|ENSG00000132872|Q9H2B2-2|SYT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25555419921875	2	440.255977	878.497401	-0.77584	-0.00034157	-0.60845	-0.00026787	-1.3843	-0.00060944	440.2555338986884	74.395	0.77566	74.786	74.541	75.317	0.39111					44	18	3	0	0	0	0.82658	1	8382	8382		21.96	0.25755	1	590790	+		531	19039	378	379	735	735					0.05329221962904285
AGFKKKSN	8	Unmodified	_AGFKKKSN_					0	0	0			REV__nc|ENSG00000132872|Q9H2B2-2|SYT4	REV__nc|ENSG00000132872|Q9H2B2-2|SYT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2554016113281	2	440.255977	878.497401	0.25826	0.0001137	-1.4885	-0.00065531	-1.2302	-0.00054161	440.2551628141125	62.575	1.3839	63.129	62.257	63.641	0.5545					72	31	3	0	0	0	0.85277	1	6760	6760		25.45	5.4534	1	690880	+		532	19039	378	379	736	736					0.05329221962904285
AGFLTPQN	8	Unmodified	_AGFLTPQN_					0	0	0			REV__ENST00000552491.5_1_12:50570180-50570246:-|nuORF	REV__ENST00000552491.5_1_12:50570180-50570246:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.2184143066406	2	424.21906	846.423567	2.8621	0.0012142	-4.1607	-0.001765	-1.2985	-0.00055086	424.2172299005605	101.48	1.8959	101.53	100.85	102.75	0.044823					89	45	3	0	0	0	0.884	1	10967	10967		33.516	3.0119	1	2047000	+		533	28628	379	380	737	737					-0.005787461994259502
AGFLTPQN	8	Unmodified	_AGFLTPQN_					0	0	0			REV__ENST00000552491.5_1_12:50570180-50570246:-|nuORF	REV__ENST00000552491.5_1_12:50570180-50570246:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.218505859375	2	424.21906	846.423567	-1.7078	-0.00072449	0.68599	0.00029101	-1.0218	-0.00043348	424.2192991334227	101.86	1.3095	102.06	101.54	102.85	0.19484					57	31	2	0	0	0	0.884	1	10688	10688		33.516	1.5607	1	1022300	+		534	28628	379	380	738	738					-0.005787461994259502
AGFPVAVR	8	Unmodified	_AGFPVAVR_					0	0	0		ENST00000432379.5_1_10:49514781-49516234:+|nuORF	ENST00000432379.5_1_10:49514781-49516234:+|nuORF	ENST00000432379.5_1_10:49514781-49516234:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7379150390625	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.86791	1	2075	2075		28.254	2.8041	1	1448600			535	11666	380	381	739	739					0.05025854279756459
AGGCGHDEC	9	Unmodified	_AGGCGHDEC_					0	0	0		nc|ENSG00000184916|Q9Y219-2|JAG2;ENSG00000184916|ENST00000331782|JAG2	nc|ENSG00000184916|Q9Y219-2|JAG2	nc|ENSG00000184916|Q9Y219-2|JAG2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.63873291015625	2	424.63672	847.258887	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.979	1	37.465	36.965	37.965	0.48581								0	0	0	0.35896	1	2957	2957		12.207	0.69583	1				536	7653	381	382	740	740					-0.17085249673198177
AGGGAAAL	8	Unmodified	_AGGGAAAL_					0	0	0		ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.3099975585938	1	587.314751	586.307475	-0.27537	-0.00016173	-2.3553	-0.0013833	-2.6306	-0.001545	587.3132541550186	69.771	1.0862	70.317	70.003	71.089	0.54694					46	28	2	0	0	0	0.85228	1	7739	7739		10.185	0	1	875240			537	10815	382	383	741	741					-0.002226449794989094
AGGGAAAL	8	Unmodified	_AGGGAAAL_					0	0	0		ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		1	587.314751	586.307475	-0.72846	-0.00042784	-1.8901	-0.0011101	-2.6186	-0.0015379	587.3135265284533	70.728	0.48001	70.758	70.5	70.98	0.030495	0.236	0.0002913	NaN	10.185	40	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	377370			538	10815	382	383							-0.002226449794989094
AGGGAAAL	8	Unmodified	_AGGGAAAL_					0	0	0		ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		1	587.314751	586.307475	-0.31936	-0.00018757	-2.1994	-0.0012918	-2.5188	-0.0014793	587.3133525795757	70.612	0.55727	70.574	70.392	70.949	-0.037857	0.051878	0.00010966	NaN	10.185	44	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	321740			539	10815	382	383							-0.002226449794989094
AGGGAAAL	8	Unmodified	_AGGGAAAL_					0	0	0		ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		1	587.314751	586.307475	-1.5952	-0.00093688	-1.5338	-0.00090084	-3.129	-0.0018377	587.3136222218553	70.568	0.68926	70.606	70.346	71.035	0.038055	0.083397	0.00050057	NaN	10.185	53	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	342140			540	10815	382	383							-0.002226449794989094
AGGGAAAL	8	Unmodified	_AGGGAAAL_					0	0	0		ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		1	587.314751	586.307475	0.73803	0.00043346	-3.3287	-0.001955	-2.5906	-0.0015215	587.3126951451213	70.432	0.59584	70.567	70.311	70.907	0.13506	0.045264	-0.00055357	NaN	10.185	44	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	238450			541	10815	382	383							-0.002226449794989094
AGGGAAAL	8	Unmodified	_AGGGAAAL_					0	0	0		ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		1	587.314751	586.307475	0.61455	0.00036093	-3.1527	-0.0018516	-2.5382	-0.0014907	587.3127751822057	70.474	0.54652	70.604	70.305	70.852	0.12965	0.081625	-0.00045023	NaN	10.185	47	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	322230			542	10815	382	383							-0.002226449794989094
AGGGAAAL	8	Unmodified	_AGGGAAAL_					0	0	0		ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	ENST00000376148.8_1_6:31525946-31526018:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		1	587.314751	586.307475	-0.75772	-0.00044502	-1.5899	-0.00093377	-2.3476	-0.0013788	587.3135622021784	69.845	1.3344	70.229	69.875	71.21	0.38416	-0.29344	0.00046764	NaN	10.185	56	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	915700			543	10815	382	383							-0.002226449794989094
AGGGKKGG	8	Unmodified	_AGGGKKGG_					0	0	0		ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	631.33984375	1	631.3522	630.344923	1.3959	0.00088129	0.88422	0.00055825	2.2801	0.0014395	631.3525720458526	72.768	3.8128	72.897	71.113	74.926	0.1292					409	150	4	0	0	0	0.86294	1	6773	6773		8.8223	0.59103	1	22315000			544	2445	383	384	742	742					0.014964462861485117
AGGGKKGG	8	Unmodified	_AGGGKKGG_					0	0	0		ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	631.3339233398438	1	631.3522	630.344923	0.6779	0.000428	1.5419	0.00097347	2.2198	0.0014015	631.3529796939395	72.677	3.8079	72.807	71.121	74.929	0.13064					390	149	5	0	0	0	0.4196	1	6778	6778		4.3163	0.33103	1	22025000			545	2445	383	384	743	743					0.014964462861485117
AGGGKKGG	8	Unmodified	_AGGGKKGG_					0	0	0		ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		1	631.3522	630.344923	0.11063	6.9848E-05	2.0871	0.0013177	2.1977	0.0013875	631.3533357306034	72.768	3.8484	72.811	71.055	74.903	0.042122	-0.13411	-6.2019E-05	NaN	4.3163	404	170	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23239000			546	2445	383	384							0.014964462861485117
AGGGKKGG	8	Unmodified	_AGGGKKGG_					0	0	0		ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		1	631.3522	630.344923	-0.65083	-0.0004109	2.9071	0.0018354	2.2563	0.0014245	631.3538381411815	72.88	3.8332	72.963	71.146	74.979	0.083138	0.018324	0.00045571	NaN	4.3163	357	154	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23149000			547	2445	383	384							0.014964462861485117
AGGGKKGG	8	Unmodified	_AGGGKKGG_					0	0	0		ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		1	631.3522	630.344923	-0.85109	-0.00053734	3.1899	0.002014	2.3388	0.0014766	631.354093355011	72.678	2.9075	73.063	71.421	74.329	0.38581	0.1188	0.00063428	NaN	4.3163	190	72	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16328000			548	2445	383	384							0.014964462861485117
AGGGKKGG	8	Unmodified	_AGGGKKGG_					0	0	0		ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	ENSG00000109061|ENST00000226207|MYH1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		1	631.3522	630.344923	1.0328	0.00065208	1.283	0.00081003	2.3158	0.0014621	631.352912896224	72.566	2.698	73.12	71.58	74.278	0.55386	0.17566	-0.00056966	NaN	4.3163	193	70	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17233000			549	2445	383	384							0.014964462861485117
AGGGPCPG	8	Unmodified	_AGGGPCPG_					0	0	0			REV__ENST00000396076.5_1_12:21810468-21810579:-|nuORF	REV__ENST00000396076.5_1_12:21810468-21810579:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	615.2549438476562	1	615.255522	614.248246	-0.57819	-0.00035574	0.59412	0.00036553	0.015928	9.7996E-06	615.2540675924156	70.941	1.0162	70.941	70.569	71.585	0					98	50	3	0	0	0	0.85228	1	6335	6335		10.185	5.0979	1	218510	+		550	26134	384	385	744	744					-0.0743086426531363
AGGGVGIRY	9	Unmodified	_AGGGVGIRY_					0	0	0			REV__ENSG00000178921|ENST00000314666|PFAS	REV__ENSG00000178921|ENST00000314666|PFAS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.3059387207031	2	425.232502	848.450451	0.82833	0.00035223	1.4468	0.00061521	2.2751	0.00096744	425.2330208665057	34.818	0.9589	35.028	34.441	35.4	0.21002					37	23	2	0	0	0	0.20789	1	2590	2590		19.36	0	1	207860	+		551	22301	385	386	745	745					0.020163624117572
AGGRKKMK	8	Unmodified	_AGGRKKMK_					0	0	0			REV__ENST00000469761.1_1_6:28185775-28185925:-|nuORF	REV__ENST00000469761.1_1_6:28185775-28185925:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.261962890625	2	438.265822	874.517091	-1.9277	-0.00084486	-3.6006	-0.001578	-5.5283	-0.0024229	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.86791	1	2470	2470		28.254	6.2944	1	3507500	+		552	27201	386	387	746	746					0.07481274702013252
AGIADTVGGF	10	Unmodified	_AGIADTVGGF_					0	0	0			REV__ENSG00000102967|ENST00000219240|DHODH	REV__ENSG00000102967|ENST00000219240|DHODH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7195129394531	2	454.229625	906.444697	0.77637	0.00035265	3.5328	0.0016047	4.3092	0.0019573	454.2308588781295	32.618	0.42562	32.83	32.593	33.019	0.21168					16	9	2	0	0	0	0.37624	1	2327	2327		37.159	9.2769	1	89150	+		553	17375	387	388	747	747					-0.012267808905676247
AGIGRRRCL	9	Unmodified	_AGIGRRRCL_					0	0	0			REV__ENST00000360982.2_1_2:183902874-183903513:-|nuORF	REV__ENST00000360982.2_1_2:183902874-183903513:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2907409667969	2	501.292902	1000.57125	-0.17938	-8.992E-05	-4.1841	-0.0020974	-4.3634	-0.0021874	501.29064541648853	99.317	1.4422	99.365	98.853	100.3	0.047523					88	33	4	0	0	0	0.77546	1	10656	10656		31.955	0.42505	1	1053700	+		554	25489	388	389	748	748					0.07098866853573327
AGILRVLPRKS	11	Unmodified	_AGILRVLPRKS_					0	0	0		ENST00000338272.8_1_1:109637645-109637765:+|nuORF	ENST00000338272.8_1_1:109637645-109637765:+|nuORF	ENST00000338272.8_1_1:109637645-109637765:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9295654296875	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.76699	1	3791	3791		11.932	0	1	2636600			555	10201	389	390	749	749					0.1756903972204782
AGINQIHPPN	10	Unmodified	_AGINQIHPPN_					0	0	0			REV__ENSG00000212916|ENST00000418460|MAP10	REV__ENSG00000212916|ENST00000418460|MAP10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7786865234375	2	530.780348	1059.54614	0.54385	0.00028866	-3.2192	-0.0017087	-2.6753	-0.00142	530.7785064746369	56.876	1.1282	57.431	57.181	58.309	0.55513					49	27	3	0	0	0	0.5766	1	5931	5931		51.335	11.277	1	3022800	+		556	23603	390	391	750	750					0.018750905319848243
AGIPKLIT	8	Unmodified	_AGIPKLIT_					0	0	0		nc|ENSG00000163738|Q9H903-1|MTHFD2L;ENSG00000163738|ENST00000325278|MTHFD2L	nc|ENSG00000163738|Q9H903-1|MTHFD2L	nc|ENSG00000163738|Q9H903-1|MTHFD2L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.21783447265625	2	406.765646	811.516739	0.85106	0.00034618	-3.8809	-0.0015786	-3.0298	-0.0012324	406.7640442107716	85.936	1.111	85.863	85.451	86.562	-0.073761					35	25	2	0	0	0	0.4196	1	8834	8834		18.324	9.5021	1	105270			557	5859	391	392	751	751					0.10344178253785685
AGKAGLLML	9	Unmodified	_AGKAGLLML_					0	0	0		ENST00000368261.7_1_1:156278982-156279036:-|nuORF	ENST00000368261.7_1_1:156278982-156279036:-|nuORF	ENST00000368261.7_1_1:156278982-156279036:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2654113769531	2	437.264956	872.515359	-0.36505	-0.00015962	2.0195	0.00088307	1.6545	0.00072345	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.77546	1	1027	1027		31.955	3.7006	1	1300600			558	10586	392	393	752	752					0.07400220893384812
AGKIAHTK	8	Unmodified	_AGKIAHTK_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2509765625	2	413.250695	824.486836	1.2223	0.00050513	-0.50367	-0.00020814	0.71868	0.00029699	413.25036725206917	24.603	0.94434	24.275	23.804	24.748	-0.32825					42	20	3	0	0	0	0.79403	1	1199	1199		63.306	5.495	1	295260			559	7038	393	394	753	753					0.06757239308478802
AGKQRVPK	8	Unmodified	_AGKQRVPK_					0	0	0			REV__ENST00000409603.5_1_7:28530840-28534545:+|nuORF	REV__ENST00000409603.5_1_7:28530840-28534545:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2767028808594	2	442.277244	882.539935	0.081163	3.5896E-05	-0.012072	-5.3394E-06	0.06909	3.0557E-05	442.2771920652854	16.835	0.26308	16.348	16.189	16.452	-0.48718					14	5	3	0	0	0	0.91005	1	178	178		42.474	7.2737	1	112910	+		560	26350	394	395	754	754					0.09396617091135795
AGKSGPGIKP	10	Unmodified	_AGKSGPGIKP_					0	0	0			REV__nc|ENSG00000143257|Q14994-16|NR1I3	REV__nc|ENSG00000143257|Q14994-16|NR1I3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.26934814453125	2	456.269084	910.523616	1.0852	0.00049514	-0.94589	-0.00043158	0.1393	6.3559E-05	456.26850794128734	27.802	1.27	27.547	27.196	28.466	-0.25465					68	30	3	0	0	0	0.64457	1	1674	1674		47.657	1.6851	1	382970	+		561	29901	395	396	755	755					0.06477491134364755
AGLAPFRL	8	Unmodified	_AGLAPFRL_					0	0	0		ENSG00000283632|ENST00000413988|EXOC3L2	ENSG00000283632|ENST00000413988|EXOC3L2	ENSG00000283632|ENST00000413988|EXOC3L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.7557373046875	2	422.755613	843.496673	-0.74002	-0.00031285	1.1647	0.00049239	0.4247	0.00017954	422.75593991539887	57.593	1.04	57.987	57.655	58.695	0.39407					58	25	3	0	0	0	0.85277	2	6014	5991;6014		33.516	0	1	2287500			562	9060	396	397	756;757	757					0.06866427313855183
AGLAPFRL	8	Unmodified	_AGLAPFRL_					0	0	0		ENSG00000283632|ENST00000413988|EXOC3L2	ENSG00000283632|ENST00000413988|EXOC3L2	ENSG00000283632|ENST00000413988|EXOC3L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.75567626953125	2	422.755613	843.496673	0.66355	0.00028052	-0.13054	-5.5185E-05	0.53302	0.00022534	422.7554517175375	57.439	1.3239	57.994	57.642	58.966	0.55512					58	32	3	0	0	0	0.85277	1	5979	5979		25.45	0	1	1986200			563	9060	396	397	758	758					0.06866427313855183
AGLENKAVV	9	Unmodified	_AGLENKAVV_					0	0	0			REV__nc|ENSG00000163395|Q86VF2|IGFN1	REV__nc|ENSG00000163395|Q86VF2|IGFN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.7611083984375	2	450.761092	899.507631	1.1042	0.00049772	-0.87473	-0.0003943	0.22944	0.00010342	450.76047020922516	33.711	0.79038	34.016	33.575	34.366	0.30494					37	18	4	0	0	0	0.31972	1	2464	2464		63.306	0	1	581490	+		564	20911	397	398	759	759					0.053857848974644185
AGLETTYT	8	Unmodified	_AGLETTYT_					0	0	0		ENSG00000083097|ENST00000349129|DOP1A	ENSG00000083097|ENST00000349129|DOP1A	ENSG00000083097|ENST00000349129|DOP1A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2613525390625	2	428.208358	854.402163	-0.17886	-7.6589E-05	2.4235	0.0010378	2.2446	0.00096117	428.20942098797735	90.913	0.51402	90.982	90.681	91.195	0.069328					22	12	3	0	0	0	0.4196	1	9363	9363		33.516	15.191	1	252830			565	1496	398	399	760	760					-0.03086176018803144
AGLFRLPA	8	Unmodified	_AGLFRLPA_					0	0	0			REV__ENST00000461013.5_1_5:131713711-131714174:+|nuORF	REV__ENST00000461013.5_1_5:131713711-131714174:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.75616455078125	2	422.755613	843.496673	-0.74002	-0.00031285	1.1647	0.00049239	0.4247	0.00017954	422.75593991539887	57.593	1.04	57.987	57.655	58.695	0.39407					58	25	3	0	0	0	0.86288	1	5981	5981		26.796	1.3459	1	2287500	+		566	27020	399	400	761	761					0.06866427313843815
AGLGICISY	9	Unmodified	_AGLGICISY_					0	0	0		chr17:13496818-13539067|25|15.16|0.15|6.64|-|0|TE_info:MLT1H1,MLT1H1_dup3156,ERVL-MaLR,LTR,donor,-,13539067,13539297|HS3ST3A1,None|2	chr17:13496818-13539067|25|15.16|0.15|6.64|-|0|TE_info:MLT1H1,MLT1H1_dup3156,ERVL-MaLR,LTR,donor,-,13539067,13539297|HS3ST3A1,None|2	chr17:13496818-13539067|25|15.16|0.15|6.64|-|0|TE_info:MLT1H1,MLT1H1_dup3156,ERVL-MaLR,LTR,donor,-,13539067,13539297|HS3ST3A1,None|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2606506347656	2	448.730946	895.447339	-1.3991	-0.00062783	-1.6265	-0.00072984	-3.0256	-0.0013577	448.72987172574494	71.47	0.74606	71.855	71.586	72.333	0.38449					34	17	2	0	0	0	0.20789	1	7994	7994		60.294	10.269	1	132730			567	212	400	401	762	762					-0.004566487572560618
AGLHILDI	8	Unmodified	_AGLHILDI_					0	0	0			REV__ENSG00000129667|ENST00000675367|RHBDF2	REV__ENSG00000129667|ENST00000675367|RHBDF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.585693359375	2	426.252903	850.491253	0.4358	0.00018576	-0.075653	-3.2247E-05	0.36015	0.00015351	426.2528767672863	17.745	0.45401	17.124	16.993	17.447	-0.62141					20	11	3	0	0	0	0.4196	1	318	318		28.254	11.781	1	150310	+		568	18829	401	402	763	763					0.06002703731383008
AGLHKGVM	8	Unmodified	_AGLHKGVM_					0	0	0			REV__nc|ENSG00000119707|P49756-4|RBM25	REV__nc|ENSG00000119707|P49756-4|RBM25	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7281799316406	2	406.725998	811.437443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.727	1	76.775	76.275	77.275	0.047981								0	0	0	0.30125	1	7510	7510		20.482	2.1574	1		+		569	18373	402	403	764	764					0.024182080280183982
AGLLAPLLT	9	Unmodified	_AGLLAPLLT_					0	0	0			REV__ENSG00000204839|ENST00000398882|MROH6	REV__ENSG00000204839|ENST00000398882|MROH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7793273925781	2	434.778754	867.542954	0.13638	5.9295E-05	3.2501	0.0014131	3.3864	0.0014724	434.7800361226264	34.243	0.88012	34.352	33.821	34.701	0.10829					118	39	4	0	0	0	0.78058	1	1689	1689		30.504	3.7075	1	2838300	+		570	23521	403	404	765	765					0.10388447425270897
AGLLAPRQ	8	Unmodified	_AGLLAPRQ_					0	0	0		nc|ENSG00000081985|Q99665-2|IL12RB2;nc|ENSG00000081985|Q99665-3|IL12RB2;ENSG00000081985|ENST00000674203|IL12RB2	nc|ENSG00000081985|Q99665-2|IL12RB2	nc|ENSG00000081985|Q99665-2|IL12RB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2528076171875	2	413.250695	824.486836	1.2223	0.00050513	-0.50367	-0.00020814	0.71868	0.00029699	413.25036725206917	24.603	0.94434	24.275	23.804	24.748	-0.32825					42	20	3	0	0	0	0.52826	1	1188	1188		74.517	11.538	1	295260			571	1476	404	405	766	766					0.06757239308467433
AGLLAPRQ	8	Unmodified	_AGLLAPRQ_					0	0	0		nc|ENSG00000081985|Q99665-2|IL12RB2;nc|ENSG00000081985|Q99665-3|IL12RB2;ENSG00000081985|ENST00000674203|IL12RB2	nc|ENSG00000081985|Q99665-2|IL12RB2	nc|ENSG00000081985|Q99665-2|IL12RB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2512512207031	2	413.250695	824.486836	1.8259	0.00075456	-1.0496	-0.00043374	0.77634	0.00032082	413.2501078586771	24.499	1.0057	23.986	23.494	24.499	-0.51365					40	22	3	0	0	0	0.89567	2	1202	1187;1202		57.453	1.9484	1	330620			572	1476	404	405	767;768	768					0.06757239308467433
AGLMYPPPL	9	Unmodified	_AGLMYPPPL_					0	0	0		ENSG00000109511|ENST00000359299|ANXA10	ENSG00000109511|ENST00000359299|ANXA10	ENSG00000109511|ENST00000359299|ANXA10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.7601013183594	2	479.756964	957.499375	-0.80339	-0.00038543	4.217	0.0020231	3.4136	0.0016377	479.75885725511523	75.87	0.74811	76.438	76.142	76.89	0.56836					36	17	3	0	0	0	0.55559	1	8621	8621		49.211	8.6382	1	564170			573	2465	405	406	769	769					0.018925146564924944
AGLPAAFSSA	10	Unmodified	_AGLPAAFSSA_					0	0	0		ENST00000529074.1_1_1:109560211-109584588:-|nuORF	ENST00000529074.1_1_1:109560211-109584588:-|nuORF	ENST00000529074.1_1_1:109560211-109584588:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	446.2314147949219	2	446.232168	890.449782	2.7456	0.0012252	-3.7394	-0.0016687	-0.9938	-0.00044346	446.230433871853	103.85	2.0641	103.81	103.12	105.18	-0.043755					129	49	4	0	0	0	0.86452	2	11403	11403;11415		30.504	1.3541	1	1867400			574	13317	406	407	770;771	770					0.00017522972052574914
AGLPSARLTLL	11	Unmodified	_AGLPSARLTLL_					0	0	0		ENST00000279249.2_1_11:65082389-65088053:+|nuORF	ENST00000279249.2_1_11:65082389-65088053:+|nuORF	ENST00000279249.2_1_11:65082389-65088053:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.34521484375	2	556.345323	1110.67609	0.66359	0.00036919	-0.58219	-0.0003239	0.081399	4.5286E-05	556.344844491865	17.817	0.61456	17.335	16.991	17.606	-0.48256					33	13	4	0	0	0	0.51007	1	312	312		51.193	3.2332	1	319290			575	9614	407	408	772	772					0.12518266811139256
AGLVLKAQ	8	Unmodified	_AGLVLKAQ_					0	0	0			REV__ENST00000589645.5_1_17:42461260-42462716:-|nuORF	REV__ENST00000589645.5_1_17:42461260-42462716:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2554626464844	2	400.255446	798.496338	1.9238	0.00077003	-1.2289	-0.00049189	0.69489	0.00027813	400.2548732861182	18.482	0.42122	18.005	17.796	18.218	-0.47694					16	8	3	0	0	0	0.36483	1	403	403		100.27	23.499	1	191940	+		576	29167	408	409	773	773					0.08903007593983148
AGLVLVLK	8	Unmodified	_AGLVLVLK_					0	0	0		ENST00000534591.1_1_11:64876790-64877821:+|nuORF	ENST00000534591.1_1_11:64876790-64877821:+|nuORF	ENST00000534591.1_1_11:64876790-64877821:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78387451171875	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.87276	1	1326	1326		29.842	1.5873	1	1410200			577	13411	409	410	774	774					0.13981055150497923
AGLVWSKIFPK	11	Unmodified	_AGLVWSKIFPK_					0	0	0			REV__chr1:81981150-81981808|38|12.34|0.54|4.51|+|ENST00000674489|ADGRL2,ADGRL2	REV__chr1:81981150-81981808|38|12.34|0.54|4.51|+|ENST00000674489|ADGRL2,ADGRL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.2290954589844	3	415.916653	1244.72813	-0.22523	-9.3677E-05	-2.6773	-0.0011136	-2.9026	-0.0012072	415.9154632459283	38.953	1.1876	39.295	38.938	40.125	0.34187					75	27	4	0	0	0	0.17553	1	3212	3212		43.651	4.8972	1	401200	+		578	15456	410	411	775	775					0.11555430224871088
AGLVWSKIFPK	11	Unmodified	_AGLVWSKIFPK_					0	0	0			REV__chr1:81981150-81981808|38|12.34|0.54|4.51|+|ENST00000674489|ADGRL2,ADGRL2	REV__chr1:81981150-81981808|38|12.34|0.54|4.51|+|ENST00000674489|ADGRL2,ADGRL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	415.916653	1244.72813	0.18068	7.5147E-05	-9.1341	-0.003799	-8.9534	-0.0037239	416.2467002573936	39.413	0.10251	39.501	39.427	39.53	0.088371	0.10325	-0.0079021	NaN	43.651	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35877	+		579	15456	410	411							0.11555430224871088
AGNETKQRKP	10	Unmodified	_AGNETKQRKP_					0	0	0			REV__ENSG00000159335|ENST00000309083|PTMS	REV__ENSG00000159335|ENST00000309083|PTMS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	564.8103637695312	2	564.809636	1127.60472	0.35689	0.00020157	2.0996	0.0011859	2.4565	0.0013875	564.8106294812429	43.764	0.5329	43.773	43.519	44.052	0.0084534					29	12	3	0	0	0	0.24988	1	3039	3039		78.264	8.6362	1	252040	+		580	20654	411	412	776	776					0.04602147106470511
AGNETKQRKP	10	Unmodified	_AGNETKQRKP_					0	0	0			REV__ENSG00000159335|ENST00000309083|PTMS	REV__ENSG00000159335|ENST00000309083|PTMS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	564.8089599609375	2	564.809636	1127.60472	0.35113	0.00019832	1.4914	0.00084233	1.8425	0.0010407	564.8103485751919	43.712	0.65797	43.769	43.482	44.14	0.056747					28	15	2	0	0	0	0.18739	3	3017	3017;3027;3040		89.029	25.495	1	336180	+		581	20654	411	412	777;778;779	777					0.04602147106470511
AGNETKQRKP	10	Unmodified	_AGNETKQRKP_					0	0	0			REV__ENSG00000159335|ENST00000309083|PTMS	REV__ENSG00000159335|ENST00000309083|PTMS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.80908203125	2	564.809636	1127.60472	0.17109	9.6631E-05	1.304	0.0007365	1.4751	0.00083313	564.8102162208658	43.686	0.61086	43.635	43.309	43.92	-0.051613					23	14	2	0	0	0	0.49027	1	3016	3016		56.632	10.66	1	390700	+		582	20654	411	412	780	780					0.04602147106470511
AGNETKQRKP	10	Unmodified	_AGNETKQRKP_					0	0	0			REV__ENSG00000159335|ENST00000309083|PTMS	REV__ENSG00000159335|ENST00000309083|PTMS	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	564.809636	1127.60472	0.35689	0.00020157	2.0996	0.0011859	2.4565	0.0013875	564.8106294812429	43.764	0.5329	43.773	43.519	44.052	0.0084534	0.047425	0.00047583	NaN	89.029	29	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252040	+		583	20654	411	412							0.04602147106470511
AGNETKQRKP	10	Unmodified	_AGNETKQRKP_					0	0	0			REV__ENSG00000159335|ENST00000309083|PTMS	REV__ENSG00000159335|ENST00000309083|PTMS	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	564.809636	1127.60472	0.35113	0.00019832	1.4914	0.00084233	1.8425	0.0010407	564.8103485751919	43.712	0.65797	43.769	43.482	44.14	0.056747	0.043254	-0.00021129	NaN	89.029	28	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	336180	+		584	20654	411	412							0.04602147106470511
AGNGGVVFK	9	Unmodified	_AGNGGVVFK_					0	0	0		ENST00000425818.2_1_15:66679685-66737158:+|nuORF;ENSG00000169032|ENST00000307102|MAP2K1;nc|ENSG00000169032|Q02750-2|MAP2K1	ENST00000425818.2_1_15:66679685-66737158:+|nuORF	ENST00000425818.2_1_15:66679685-66737158:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.9175109863281	2	424.734877	847.455202	0.64406	0.00027356	0.3082	0.0001309	0.95226	0.00040446	424.7345051736275	25.337	0.39872	25.008	24.748	25.147	-0.32825					13	8	2	0	0	0	0.20789	1	1265	1265		16.473	0	1	28530			585	6461	412	413	781	781					0.02537246554527428
AGNKILEK	8	Unmodified	_AGNKILEK_					0	0	0			REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7631530761719	2	436.763635	871.512717	-0.35586	-0.00015543	1.1406	0.00049817	0.78474	0.00034275	436.7638852040378	26.362	1.501	26.324	25.89	27.391	-0.038525					58	34	3	0	0	0	0.91977	1	1198	1198		45.952	12.436	1	147430	+		586	19131	413	414	782	782					0.071820887600893
AGNKVSTNG	9	Unmodified	_AGNKVSTNG_					0	0	0		chr1:240531963-240611884|14|24.43|0.51|5.58|-|2|None,GREM2|1	chr1:240531963-240611884|14|24.43|0.51|5.58|-|2|None,GREM2|1	chr1:240531963-240611884|14|24.43|0.51|5.58|-|2|None,GREM2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.21826171875	2	424.217049	846.419545	2.8621	0.0012142	0.58071	0.00024635	3.4428	0.0014605	424.2172299005605	101.48	1.8959	101.53	100.85	102.75	0.044823					89	45	3	0	0	0	0.76255	1	10908	10908		35.618	0.46626	1	2047000			587	44	414	415	783	783					-0.009808356931443996
AGNLKKLE	8	Unmodified	_AGNLKKLE_					0	0	0			REV__ENSG00000176928|ENST00000652361|GCNT4	REV__ENSG00000176928|ENST00000652361|GCNT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.265380859375	2	436.763635	871.512717	1.7626	0.00076985	-0.96852	-0.00042301	0.79409	0.00034683	436.7629205376576	26.512	1.1482	26.479	25.815	26.963	-0.032125					62	27	3	0	0	0	0.884	1	1157	1157		33.516	6.7195	1	159520	+		588	22161	415	416	784	784					0.07182088760077932
AGNRGMING	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AGNRGMING_					1	0	0			REV__ENST00000396465.5_1_8:74206146-74206593:-|nuORF	REV__ENST00000396465.5_1_8:74206146-74206593:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2255859375	2	466.224351	930.434149	-0.39455	-0.00018395	3.3299	0.0015525	2.9354	0.0013686	466.22572947027686	79.005	1.1051	79.416	79.1	80.205	0.41059					49	25	3	0	0	0	0.38563	1	9051	9051		58.782	7.4465	1	1043700	+		589	26144	416	417	785	785					-0.033850868166496184
AGPCRRKGE	9	Unmodified	_AGPCRRKGE_					0	0	0			REV__ENST00000398421.6_1_7:74202534-74203501:+|nuORF	REV__ENST00000398421.6_1_7:74202534-74203501:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.2538146972656	2	487.253443	972.492332	-0.86944	-0.00042364	1.6496	0.00080379	0.78019	0.00038015	487.2540607958479	28.748	0.80415	28.719	28.366	29.171	-0.029207					53	18	4	0	0	0	0.51307	1	1759	1759		51.335	1.8939	1	1269000	+		590	26204	417	418	786	786					0.00498594828638943
AGPGGAGF	8	Unmodified	_AGPGGAGF_					0	0	0		CON__Q6IME9	CON__Q6IME9	CON__Q6IME9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.296142578125	1	633.299101	632.291825	-0.33818	-0.00021417	-3.5381	-0.0022406	-3.8762	-0.0024548	633.296805429476	64.635	2.7964	64.673	62.801	65.598	0.037849					198	115	2	0	0	0	0.85228	1	5587	5587		10.185	0	1	214370		+	591	627	418	419	787	787					-0.03902931496531892
AGPKCVFK	8	Unmodified	_AGPKCVFK_					0	0	0			REV__ENST00000486013.5_1_7:132937857-133314895:+|nuORF	REV__ENST00000486013.5_1_7:132937857-133314895:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.3056945800781	2	425.236199	848.457844	1.3056	0.00055518	1.9284	0.00082001	3.2339	0.0013752	425.23681289271445	34.011	0.41283	34.316	34.2	34.613	0.30494					12	9	2	0	0	0	0.4196	1	2551	2551		19.36	16.201	1	91822	+		592	18957	419	420	788	788					0.027553786878229403
AGPLGALGPK	10	Unmodified	_AGPLGALGPK_					0	0	0			REV__nc|ENSG00000060718|P12107-2|COL11A1	REV__nc|ENSG00000060718|P12107-2|COL11A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.7668151855469	2	440.766178	879.517802	0.40229	0.00017731	0.077187	3.4022E-05	0.47947	0.00021134	440.7660677899125	18.295	0.85853	17.674	17.21	18.069	-0.62141					39	19	3	0	0	0	0.86589	1	405	405		29.15	3.6994	1	167020	+		593	15406	420	421	789	789					0.07322392622711504
AGPNCARH	8	Unmodified	_AGPNCARH_					0	0	0			REV__ENSG00000137338|ENST00000682144|PGBD1	REV__ENSG00000137338|ENST00000682144|PGBD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1937255859375	2	413.192854	824.371155	0.071072	2.9367E-05	0.71053	0.00029359	0.7816	0.00032295	413.19345857081765	82.462	1.3534	82.936	82.432	83.785	0.47383					89	32	5	0	0	0	0.86288	1	9580	9580		26.796	5.0938	1	2653900	+		594	19379	421	422	790	790					-0.04805607814034829
AGPNKVVR	8	Unmodified	_AGPNKVVR_					0	0	0			REV__ENSG00000115993|ENST00000332624|TRAK2	REV__ENSG00000115993|ENST00000332624|TRAK2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7550964355469	2	420.756144	839.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.437	1	22.018	21.518	22.518	-0.41879								0	0	0	0.29568	1	906	906		35.201	0	1		+		595	18168	422	423	791	791					0.07156641682752252
AGPNTSKKP	9	Unmodified	_AGPNTSKKP_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|16|1|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|16|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2502746582031	2	450.250892	898.48723	0.38762	0.00017452	-0.21944	-9.8803E-05	0.16818	7.5721E-05	450.25063616936995	31.332	0.77067	31.335	30.971	31.742	0.0037212					45	17	5	0	0	0	0.25483	1	2110	2110		68.787	4.5796	1	1483200	+		596	29611	423	424	792	792					0.03392614237657199
AGPPALGGGF	10	Unmodified	_AGPPALGGGF_					0	0	0			REV__nc|ENSG00000142611|Q9HAZ2-4|PRDM16	REV__nc|ENSG00000142611|Q9HAZ2-4|PRDM16	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.7118835449219	2	422.221603	842.428653	0.64746	0.00027337	0.16734	7.0653E-05	0.81479	0.00034402	422.221494839785	25.629	0.59526	25.372	25.043	25.638	-0.2572					20	13	2	0	0	0	0.37624	1	1352	1352		35.201	0	1	64904	+		597	19747	424	425	793	793					0.0011355766320093608
AGPRPLPQ	8	Unmodified	_AGPRPLPQ_					0	0	0		ENST00000531734.5_2_1:110162799-110168306:+|nuORF	ENST00000531734.5_2_1:110162799-110168306:+|nuORF	ENST00000531734.5_2_1:110162799-110168306:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.5667419433594	2	418.24287	834.471186	1.0415	0.00043558	-0.74711	-0.00031247	0.29436	0.00012311	418.2424765255765	36.54	0.49763	36.822	36.595	37.093	0.28173					19	11	2	0	0	0	0.4196	1	2853	2853		21.96	4.5949	1	207460			598	13363	425	426	794	794					0.047329527914257596
AGPRVYFLKG	10	Unmodified	_AGPRVYFLKG_					0	0	0		ENSG00000138166|ENST00000369583|DUSP5	ENSG00000138166|ENST00000369583|DUSP5	ENSG00000138166|ENST00000369583|DUSP5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.7887573242188	2	554.319109	1106.62366	-0.35225	-0.00019526	0.56849	0.00031513	0.21624	0.00011987	554.3193742915962	52.037	0.48948	52.46	52.191	52.681	0.42348					20	11	2	0	0	0	0.37624	1	5190	5190		34.173	13.226	1	1051400			599	4279	426	427	795	795					0.074617284681608
AGPTPPGPRKR	11	Unmodified	_AGPTPPGPRKR_					0	0	0		ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3301391601562	2	567.330539	1132.64652	-0.51077	-0.00028978	-0.70581	-0.00040043	-1.2166	-0.0006902	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.66929	1	9347	9347		36.447	4.9169	1	11042000			600	2166	427	428	796	796					0.0855074758567298
AGPTPPGPRKR	11	Unmodified	_AGPTPPGPRKR_					0	0	0		ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.329833984375	2	567.330539	1132.64652	-1.2006	-0.00068114	-0.16538	-9.3826E-05	-1.366	-0.00077496	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.61369	2	9741	9741;9777		42.864	2.0861	1	15673000			601	2166	427	428	797;798	797					0.0855074758567298
AGPTPPGPRKR	11	Unmodified	_AGPTPPGPRKR_					0	0	0		ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3297729492188	2	567.330539	1132.64652	1.497	0.00084932	-2.8559	-0.0016202	-1.3589	-0.00077092	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.65746	2	9876	9876;9935		37.812	8.6415	1	15259000			602	2166	427	428	799;800	799					0.0855074758567298
AGPTPPGPRKR	11	Unmodified	_AGPTPPGPRKR_					0	0	0		ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3282470703125	2	567.330539	1132.64652	0.27026	0.00015333	-1.2412	-0.00070419	-0.97098	-0.00055087	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.72106	1	11324	11324		28.081	2.5074	1	6007000			603	2166	427	428	801	801					0.0855074758567298
AGPVRPVW	8	Unmodified	_AGPVRPVW_					0	0	0			REV__nc|ENSG00000061273|Q8WUI4-3|HDAC7	REV__nc|ENSG00000061273|Q8WUI4-3|HDAC7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.5797424316406	2	441.253237	880.491922	-0.2776	-0.00012249	0.12002	5.2959E-05	-0.15758	-6.9534E-05	441.2530478984608	26.02	0.78994	25.762	25.424	26.214	-0.25721					36	17	4	0	0	0	0.4196	1	1376	1376		29.842	1.5873	1	210930	+		604	16454	428	429	802	802					0.04689543171082278
AGPVSWCLL	9	Unmodified	_AGPVSWCLL_					0	0	0			REV__nc|ENSG00000146378|Q9P1P5-2|TAAR2	REV__nc|ENSG00000146378|Q9P1P5-2|TAAR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.2482604980469	2	473.246763	944.478974	-0.25967	-0.00012289	2.9656	0.0014035	2.706	0.0012806	473.2481063617417	28.965	1.9145	28.925	28.439	30.354	-0.039907					103	58	4	0	0	0	0.72402	1	1521	1521		38.806	1.7777	1	555530	+		605	20010	429	430	803	803					0.0045134399667858816
AGQNGKAGKP	10	Unmodified	_AGQNGKAGKP_					0	0	0			REV__ENSG00000197191|ENST00000650725|CYSRT1	REV__ENSG00000197191|ENST00000650725|CYSRT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25421142578125	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.80179	1	8156	8156		39.253	2.8061	1	1482000	+		606	23207	430	431	804	804					0.027191324691784757
AGQRTLAY	8	Unmodified	_AGQRTLAY_					0	0	0		ENST00000223369.2_1_7:44253169-44253460:+|nuORF	ENST00000223369.2_1_7:44253169-44253460:+|nuORF	ENST00000223369.2_1_7:44253169-44253460:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2402038574219	2	440.237784	878.461016	0.57852	0.00025469	-0.45148	-0.00019876	0.12704	5.5927E-05	440.23750999214957	18.239	0.22056	18.215	18.139	18.359	-0.024035					14	9	2	0	0	0	0.88915	1	313	313		35.201	1.6851	1	72824			607	9181	431	432	805	805					0.016923450661806783
AGRALLLE	8	Unmodified	_AGRALLLE_					0	0	0			REV__nc|ENSG00000132466|O75179-6|ANKRD17	REV__nc|ENSG00000132466|O75179-6|ANKRD17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.75811767578125	2	421.758352	841.502152	0.92416	0.00038977	-0.49711	-0.00020966	0.42705	0.00018011	421.7580084702437	17.224	0.54485	16.742	16.532	17.077	-0.48256					24	11	3	0	0	0	0.90465	1	245	245		40.573	1.7665	1	598920	+		608	19005	432	433	806	806					0.07506106105665822
AGRFSCPVP	9	Unmodified	_AGRFSCPVP_					0	0	0			REV__ENST00000294309.7_2_11:68855463-68855787:+|nuORF	REV__ENST00000294309.7_2_11:68855463-68855787:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.234375	2	467.234187	932.453822	0.4755	0.00022217	-2.2508	-0.0010516	-1.7753	-0.00082946	467.23311313074316	67.929	1.2916	68.056	67.71	69.002	0.12748					151	49	4	0	0	0	0.78536	1	6149	6149		29.15	4.9468	1	2838000	+		609	24691	433	434	807	807					-0.01510710805882809
AGRIVLYPAP	10	Unmodified	_AGRIVLYPAP_					0	0	0			REV__ENST00000398136.6_2_11:102323274-102323652:-|nuORF	REV__ENST00000398136.6_2_11:102323274-102323652:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.8143310546875	2	528.813659	1055.61277	-0.34271	-0.00018123	1.9273	0.0010192	1.5846	0.00083795	528.8142632795276	46.145	1.3112	46.116	45.627	46.938	-0.028782					61	30	3	0	0	0	0.86452	1	3780	3780		30.504	5.0535	1	209380	+		610	26195	434	435	808	808					0.08718326093890028
AGRKRRRRRRR	11	Unmodified	_AGRKRRRRRRR_					0	0	0		ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.3302001953125	3	508.664941	1522.97299	-0.5174	-0.00026318	1.2098	0.00061538	0.6924	0.0003522	508.6658956344976	15.892	0.24942	15.94	15.759	16.008	0.047803					23	9	3	0	0	0	0.18318	1	89	89		9.6461	3.6451	1	58783			611	10359	435	436	809	809					0.23242586321725867
AGRKRRRRRRR	11	Unmodified	_AGRKRRRRRRR_					0	0	0		ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	508.664941	1522.97299	0.79827	0.00040605	0.45785	0.00023289	1.2561	0.00063895	508.66512223780825	15.985	0.24397	15.961	15.827	16.071	-0.024035	0.010462	-0.00030013	NaN	9.6461	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94869			612	10359	435	436							0.23242586321725867
AGRLAPWLL	9	Unmodified	_AGRLAPWLL_					0	0	0		ENSG00000177191|ENST00000691102|B3GNT8	ENSG00000177191|ENST00000691102|B3GNT8	ENSG00000177191|ENST00000691102|B3GNT8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8034362792969	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.77546	1	4405	4405		31.955	0	1	2118300			613	7126	436	437	810	810					0.09366360785031702
AGRLDASN	8	Unmodified	_AGRLDASN_					0	0	0			REV__ENST00000455639.6_1_4:156588205-156588531:+|nuORF	REV__ENST00000455639.6_1_4:156588205-156588531:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.20501708984375	2	402.203941	802.39333	3.1805	0.0012792	1.1816	0.00047524	4.3621	0.0017545	402.20435516833464	98.401	2.1792	98.45	97.455	99.634	0.048157					140	50	4	0	0	0	0.90523	2	10555	10530;10555		42.396	6.6056	1	1692900	+		614	26945	437	438	811;812	812					-0.015771048646229247
AGRLVATLLRW	11	Unmodified	_AGRLVATLLRW_					0	0	0			REV__ENST00000567717.1_1_16:1728292-1742376:+|nuORF	REV__ENST00000567717.1_1_16:1728292-1742376:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.25750732421875	3	419.259302	1254.75608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.247	1	69.382	68.882	69.882	0.13522								0	0	0	0.56276	1	6253	6253		21.78	0.094677	1		+		615	28883	438	439	813	813					0.13888753204969362
AGRPKVQGG	9	Unmodified	_AGRPKVQGG_					0	0	0		ENST00000508840.1_1_8:30095113-30095479:+|nuORF	ENST00000508840.1_1_8:30095113-30095479:+|nuORF	ENST00000508840.1_1_8:30095113-30095479:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2513732910156	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.78058	1	7565	7565		30.504	2.2494	1	3322700			616	12982	439	440	814	814					0.04839453677391248
AGRPPAALFL	10	Unmodified	_AGRPPAALFL_					0	0	0			REV__ENST00000448759.1_1_1:43352460-43353038:-|nuORF	REV__ENST00000448759.1_1_1:43352460-43353038:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8022155761719	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.131	1	55.158	54.658	55.658	0.027142								0	0	0	0.45132	1	4934	4934		29.15	4.9468	1		+		617	26844	440	441	815	815					0.08122056922411502
AGRQNMFGELK	11	Oxidation (M)	_AGRQNM(Oxidation (M))FGELK_		AGRQNM(1)FGELK		AGRQNM(71)FGELK	0	0	1			REV__ENSG00000085999|ENST00000371975|RAD54L	REV__ENSG00000085999|ENST00000371975|RAD54L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.8154907226562	2	633.816604	1265.61866	-0.40794	-0.00025856	-2.2214	-0.001408	-2.6293	-0.0016665	633.8151815073458	76.07	0.77838	76.07	75.699	76.477	0					74	27	4	0	0	0	0.31977	1	6903	6903		70.816	10.698	1	231670	+		618	16904	441	442	816	816		244			-0.0035294345675538352
AGRQNMFGELK	11	Oxidation (M)	_AGRQNM(Oxidation (M))FGELK_		AGRQNM(1)FGELK		AGRQNM(64)FGELK	0	0	1			REV__ENSG00000085999|ENST00000371975|RAD54L	REV__ENSG00000085999|ENST00000371975|RAD54L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.814697265625	2	633.816604	1265.61866	-0.21836	-0.0001384	-2.4748	-0.0015686	-2.6931	-0.001707	633.8149832023514	75.797	0.86972	75.751	75.381	76.251	-0.045975					72	22	4	0	0	0	0.34641	1	7499	7499		63.534	12.341	1	416850	+		619	16904	441	442	817	817		244			-0.0035294345675538352
AGRQNMFGELK	11	Oxidation (M)	_AGRQNM(Oxidation (M))FGELK_		AGRQNM(1)FGELK		AGRQNM(73)FGELK	0	0	1			REV__ENSG00000085999|ENST00000371975|RAD54L	REV__ENSG00000085999|ENST00000371975|RAD54L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.8143920898438	2	633.816604	1265.61866	0.41115	0.00026059	-3.0121	-0.0019091	-2.601	-0.0016485	633.8146373815393	75.69	0.90498	75.736	75.32	76.224	0.046448					72	23	4	0	0	0	0.31387	2	7348	7348;7358		72.879	26.439	1	489770	+		620	16904	441	442	818;819	818		244			-0.0035294345675538352
AGRQNMFGELK	11	Oxidation (M)	_AGRQNM(Oxidation (M))FGELK_		AGRQNM(1)FGELK		AGRQNM(67)FGELK	0	0	1			REV__ENSG00000085999|ENST00000371975|RAD54L	REV__ENSG00000085999|ENST00000371975|RAD54L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.81494140625	2	633.816604	1265.61866	-0.74532	-0.0004724	-1.7872	-0.0011327	-2.5325	-0.0016051	633.8153934693904	75.753	0.80846	75.841	75.424	76.232	0.087639					62	21	4	0	0	0	0.32928	1	7016	7016		67.494	18.052	1	337910	+		621	16904	441	442	820	820		244			-0.0035294345675538352
AGRQNMFGELK	11	Oxidation (M)	_AGRQNM(Oxidation (M))FGELK_		AGRQNM(1)FGELK		AGRQNM(74)FGELK	0	0	1			REV__ENSG00000085999|ENST00000371975|RAD54L	REV__ENSG00000085999|ENST00000371975|RAD54L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.8128662109375	2	633.816604	1265.61866	1.0717	0.00067928	-3.4975	-0.0022168	-2.4258	-0.0015375	633.81429085978	75.173	0.6546	75.737	75.371	76.026	0.56458					27	15	2	0	0	0	0.29858	1	8513	8513		74.165	14.047	1	719340	+		622	16904	441	442	821	821		244			-0.0035294345675538352
AGRRRAAG	8	Unmodified	_AGRRRAAG_					0	0	0		ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480232.5_1_20:57464299-57464407:+|nuORF;ENST00000484504.5_1_20:57464299-57475007:+|nuORF;ENST00000485673.5_1_20:57464182-57464599:+|nuORF	ENST00000480975.5_1_20:57464272-57485881:+|nuORF	ENST00000480975.5_1_20:57464272-57485881:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.7417297363281	2	407.74136	813.468167	2.5329	0.0010328	-1.4361	-0.00058555	1.0968	0.00044723	407.7407372409023	25.549	1.0209	25.118	24.806	25.827	-0.4311					41	23	3	0	0	0	0.81724	1	1340	1340		14.664	0.88877	1	494360			623	12367	442	443	822	822					0.05397122457270598
AGRRVRPAPL	10	Unmodified	_AGRRVRPAPL_					0	0	0		ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8399658203125	2	546.841074	1091.66759	-0.41161	-0.00022509	-2.2056	-0.0012061	-2.6172	-0.0014312	546.8400747085221	101.16	3.89	101.19	100.52	104.41	0.031036					283	93	6	0	0	0	0.71042	6	10827	10733;10815;10827;10887;10899;10923		44.117	8.3025	1	40007000			624	9630	443	444	823;824;825;826;827;828	825					0.12542757685173456
AGRRVRPAPL	10	Unmodified	_AGRRVRPAPL_					0	0	0		ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.8401489257812	2	546.841074	1091.66759	0.19665	0.00010754	-2.8678	-0.0015682	-2.6712	-0.0014607	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.84112	3	10668	10537;10609;10668		37.159	2.1027	1	55511000			625	9630	443	444	829;830;831	831					0.12542757685173456
AGRRVRPAPL	10	Unmodified	_AGRRVRPAPL_					0	0	0		ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8399658203125	2	546.841074	1091.66759	0.84844	0.00046396	-3.1925	-0.0017458	-2.3441	-0.0012818	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.84112	3	10636	10636;10648;10709		37.159	3.6435	1	43597000			626	9630	443	444	832;833;834	832					0.12542757685173456
AGRRVRPAPL	10	Unmodified	_AGRRVRPAPL_					0	0	0		ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.34326171875	2	546.841074	1091.66759	0.96702	0.0005288	-2.8806	-0.0015752	-1.9136	-0.0010464	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.85934	1	12304	12304		35.618	7.736	1	9124000			627	9630	443	444	835	835					0.12542757685173456
AGRRVRSRPPG	11	Unmodified	_AGRRVRSRPPG_					0	0	0		ENST00000424684.2_1_1:149287578-149287776:+|nuORF	ENST00000424684.2_1_1:149287578-149287776:+|nuORF	ENST00000424684.2_1_1:149287578-149287776:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.8579711914062	2	604.857786	1207.70102	1.0175	0.00061544	-0.091138	-5.5126E-05	0.92635	0.00056031	604.8577747770171	81.696	1.319	81.841	80.932	82.251	0.14513					44	30	2	0	0	0	0.75121	1	7823	7823		8.2351	0	1	478340			628	11520	444	445	836	836					0.10547759457085704
AGRRVRSRPPG	11	Unmodified	_AGRRVRSRPPG_					0	0	0		ENST00000424684.2_1_1:149287578-149287776:+|nuORF	ENST00000424684.2_1_1:149287578-149287776:+|nuORF	ENST00000424684.2_1_1:149287578-149287776:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.8585205078125	2	604.857786	1207.70102	-1.0601	-0.00064122	1.7701	0.0010707	0.70999	0.00042944	604.8590287609827	81.871	2.3278	81.986	81.043	83.371	0.11426					72	54	2	0	0	0	0.74771	1	7809	7809		8.6937	0	1	398390			629	11520	444	445	837	837					0.10547759457085704
AGRRVRSRPPG	11	Unmodified	_AGRRVRSRPPG_					0	0	0		ENST00000424684.2_1_1:149287578-149287776:+|nuORF	ENST00000424684.2_1_1:149287578-149287776:+|nuORF	ENST00000424684.2_1_1:149287578-149287776:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8583984375	2	604.857786	1207.70102	0.22273	0.00013472	1.0841	0.0006557	1.3068	0.00079042	604.8583327420461	82.105	1.1205	82.531	81.753	82.873	0.42645					96	27	4	0	0	0	0.45515	1	9423	9423		37.812	0	1	3330300			630	11520	444	445	838	838					0.10547759457085704
AGRRVRSRPPG	11	Unmodified	_AGRRVRSRPPG_					0	0	0		ENST00000424684.2_1_1:149287578-149287776:+|nuORF	ENST00000424684.2_1_1:149287578-149287776:+|nuORF	ENST00000424684.2_1_1:149287578-149287776:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8594970703125	2	604.857786	1207.70102	-0.021086	-1.2754E-05	0.93747	0.00056704	0.91639	0.00055428	604.8585066664384	79.213	1.3596	79.762	78.896	80.256	0.54945					60	31	3	0	0	0	0.69687	1	9108	9108		16.717	0	1	663810			631	11520	444	445	839	839					0.10547759457085704
AGRSVPPVP	9	Unmodified	_AGRSVPPVP_					0	0	0			REV__ENST00000531243.2_1_1:40041622-40042411:-|nuORF	REV__ENST00000531243.2_1_1:40041622-40042411:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25543212890625	2	440.255977	878.497401	-0.8618	-0.00037941	-0.60853	-0.00026791	-1.4703	-0.00064732	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.7932	1	6878	6878		21.96	0.25755	1	1365500	+		632	28297	445	446	840	840					0.05329221962904285
AGRTGCYIVI	10	Unmodified	_AGRTGCYIVI_					0	0	0		nc|ENSG00000152894|Q15262|PTPRK;ENSG00000152894|ENST00000368226|PTPRK;nc|ENSG00000152894|Q15262-3|PTPRK;nc|ENSG00000152894|Q15262-4|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.7802124023438	2	526.781502	1051.54845	-0.039773	-2.0952E-05	-3.1255	-0.0016465	-3.1653	-0.0016674	526.7796901586527	62.695	1.081	62.69	62.4	63.481	-0.0055504					101	51	3	0	0	0	0.344	1	5813	5813		68.787	0.30212	1	675050			633	5202	446	447	841	841					0.024738029454283605
AGRVAALAAGG	11	Unmodified	_AGRVAALAAGG_					0	0	0		ENST00000288087.11_1_14:24685132-24685267:-|nuORF	ENST00000288087.11_1_14:24685132-24685267:-|nuORF	ENST00000288087.11_1_14:24685132-24685267:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2625732421875	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.72228	1	7477	7477		27.882	1.0861	1	1329900			634	9662	447	448	842	842					0.054357228488470355
AGRVPALLLC	10	Unmodified	_AGRVPALLLC_					0	0	0		ENST00000507603.1_1_4:75230965-75246855:+|nuORF;ENSG00000124882|ENST00000244869|EREG	ENST00000507603.1_1_4:75230965-75246855:+|nuORF	ENST00000507603.1_1_4:75230965-75246855:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.80047607421875	2	506.802237	1011.58992	-0.4843	-0.00024544	-1.1848	-0.00060045	-1.6691	-0.00084589	506.8016364988691	53.923	1.2683	53.971	53.181	54.449	0.047802					71	44	2	0	0	0	0.84112	1	4405	4405		37.159	6.6555	1	157540			635	3367	448	449	843	843					0.08458983704781531
AGRVPALLLC	10	Unmodified	_AGRVPALLLC_					0	0	0		ENST00000507603.1_1_4:75230965-75246855:+|nuORF;ENSG00000124882|ENST00000244869|EREG	ENST00000507603.1_1_4:75230965-75246855:+|nuORF	ENST00000507603.1_1_4:75230965-75246855:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.7989501953125	2	506.802237	1011.58992	0.30541	0.00015478	-2.6091	-0.0013223	-2.3037	-0.0011675	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.85939	1	3235	3235		23.042	2.0956	1	412810			636	3367	448	449	844	844					0.08458983704781531
AGRWRRKP	8	Unmodified	_AGRWRRKP_					0	0	0		ENST00000569248.5_1_16:730446-730920:+|nuORF	ENST00000569248.5_1_16:730446-730920:+|nuORF	ENST00000569248.5_1_16:730446-730920:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.8085327148438	2	513.807034	1025.59952	-0.47838	-0.0002458	4.3315	0.0022255	3.8531	0.0019797	513.8090681534527	46.11	2.0095	46.581	45.725	47.735	0.47139					108	48	3	0	0	0	0.85277	1	4312	4312		25.45	1.2474	1	5264100			637	13979	449	450	845	845					0.08773932825192787
AGRYTIKVL	9	Unmodified	_AGRYTIKVL_					0	0	0		nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-9|FLNB;ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-4|FLNB	nc|ENSG00000136068|O75369-7|FLNB	nc|ENSG00000136068|O75369-7|FLNB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8130187988281	2	510.813659	1019.61277	0.55381	0.0002829	-2.2532	-0.001151	-1.6994	-0.00086807	510.8124157533129	80.736	1.2851	81.262	80.695	81.98	0.52676					56	30	3	0	0	0	0.7932	1	9318	9318		25.574	5.5773	1	1223300			638	4084	450	451	846	846					0.10374326093915442
AGSARALVVN	10	Unmodified	_AGSARALVVN_					0	0	0			REV__ENSG00000146828|ENST00000354161|SLC12A9	REV__ENSG00000146828|ENST00000354161|SLC12A9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2783508300781	2	479.277441	956.540328	-0.90579	-0.00043413	1.2321	0.00059054	0.32635	0.00015641	479.2779542538447	97.646	1.4109	97.646	97.118	98.528	0					77	33	3	0	0	0	0.86471	1	9848	9848		30.318	0	1	589630	+		639	20034	451	452	847	847					0.060319920203255606
AGSARALVVN	10	Unmodified	_AGSARALVVN_					0	0	0			REV__ENSG00000146828|ENST00000354161|SLC12A9	REV__ENSG00000146828|ENST00000354161|SLC12A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2776794433594	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.86348	1	7966	7966		31.53	2.3598	1	1929800	+		640	20034	451	452	848	848					0.060319920203255606
AGSASGVPGP	10	Unmodified	_AGSASGVPGP_					0	0	0			REV__ENST00000405995.5_1_9:134372150-134372429:+|nuORF	REV__ENST00000405995.5_1_9:134372150-134372429:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2003173828125	2	400.200867	798.387182	-1.2405	-0.00049646	-2.0317	-0.00081307	-3.2722	-0.0013095	400.201810521261	68.411	1.2277	68.471	68.02	69.248	0.059288					82	51	3	0	0	0	0.84112	1	6138	6138		37.159	1.5408	1	208600	+		641	26300	452	453	849	849					-0.02007623096142197
AGSASGVPGP	10	Unmodified	_AGSASGVPGP_					0	0	0			REV__ENST00000405995.5_1_9:134372150-134372429:+|nuORF	REV__ENST00000405995.5_1_9:134372150-134372429:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.20086669921875	2	400.200867	798.387182	1.235	0.00049424	-3.6984	-0.0014801	-2.4635	-0.00098588	400.2007500976596	65.261	1.216	65.647	64.776	65.992	0.38615					58	31	3	0	0	0	0.71042	2	7075	7075;7085		44.117	5.3107	1	302440	+		642	26300	452	453	850;851	850					-0.02007623096142197
AGSGANLTNVI	11	Unmodified	_AGSGANLTNVI_					0	0	0			REV__nc|ENSG00000128591|Q14315-2|FLNC	REV__nc|ENSG00000128591|Q14315-2|FLNC	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7711181640625	2	508.772188	1015.52982	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.953	1	34.163	33.663	34.663	0.21003								0	0	0	0.33258	1	2483	2483		72.879	4.0924	1		+		643	18782	453	454	852	852					0.022679645752418764
AGSGLLLLP	9	Unmodified	_AGSGLLLLP_					0	0	0		ENSG00000213023|ENST00000600079|SYT3	ENSG00000213023|ENST00000600079|SYT3	ENSG00000213023|ENST00000600079|SYT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.7632141113281	2	420.763104	839.511654	0.16774	7.0579E-05	3.2293	0.0013588	3.3971	0.0014294	420.7645066367506	37.957	0.64798	38.051	37.748	38.396	0.094322					37	22	2	0	0	0	0.76996	1	2210	2210		33.516	8.0654	1	99756			644	8575	454	455	853	853					0.08547874391183541
AGSPAAPTVTE	11	Unmodified	_AGSPAAPTVTE_					0	0	0			REV__ENST00000257264.3_1_11:59631558-59633962:-|nuORF	REV__ENST00000257264.3_1_11:59631558-59633962:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.8626708984375	2	500.750921	999.48729	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.322	1	71.356	70.856	71.856	0.034004								0	0	0	0.56276	1	6754	6754		30.318	3.5216	1		+		645	24339	455	456	854	854					-0.012474305529849516
AGTFLNKSA	9	Unmodified	_AGTFLNKSA_					0	0	0		nc|ENSG00000173662|Q7RTX1-4|TAS1R1	nc|ENSG00000173662|Q7RTX1-4|TAS1R1	nc|ENSG00000173662|Q7RTX1-4|TAS1R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.7448425292969	2	454.745442	907.476331	-0.13391	-6.0896E-05	-0.83302	-0.00037881	-0.96693	-0.00043971	454.7449043410658	103.95	1.6099	103.94	103.26	104.87	-0.0035706					76	38	3	0	0	0	0.78983	1	11185	11185		27.882	2.4321	1	761390			646	15103	456	457	855	855					0.01889211863374385
AGTGKVQKK	9	Unmodified	_AGTGKVQKK_					0	0	0			REV__nc|ENSG00000186049|Q86Y46-2|KRT73	REV__nc|ENSG00000186049|Q86Y46-2|KRT73	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7823181152344	2	458.782359	915.550165	-1.2533	-0.00057499	0.92739	0.00042547	-0.32591	-0.00014952	458.78277385971126	21.037	1.5776	21.082	20.679	22.257	0.045401					194	76	5	0	0	0	0.041233	4	553	531;542;553;577		111.65	8.8749	1	7296300	+		647	30104	457	458	856;857;858;859	858					0.08901180025713984
AGTGKVQKK	9	Unmodified	_AGTGKVQKK_					0	0	0			REV__nc|ENSG00000186049|Q86Y46-2|KRT73	REV__nc|ENSG00000186049|Q86Y46-2|KRT73	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.7821960449219	2	458.782359	915.550165	0.041914	1.923E-05	-0.38631	-0.00017723	-0.3444	-0.000158	458.7821952343748	20.778	1.5787	20.854	20.502	22.08	0.075848					186	78	4	0	0	0	0.026451	3	535	535;542;553		120.62	8.9727	1	8263600	+		648	30104	457	458	860;861;862	860					0.08901180025713984
AGTGKVQKK	9	Unmodified	_AGTGKVQKK_					0	0	0			REV__nc|ENSG00000186049|Q86Y46-2|KRT73	REV__nc|ENSG00000186049|Q86Y46-2|KRT73	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.7821960449219	2	458.782359	915.550165	0.6342	0.00029096	-0.9481	-0.00043497	-0.3139	-0.00014401	458.78191502738554	20.969	1.8224	20.953	20.579	22.401	-0.016428					186	90	4	0	0	0	0.062302	3	528	528;548;560		102.77	8.7669	1	7964600	+		649	30104	457	458	863;864;865	863					0.08901180025713984
AGTKKTKL	8	Unmodified	_AGTKKTKL_					0	0	0		ENSG00000099290|ENST00000282633|WASHC2A;nc|ENSG00000099290|Q641Q2-2|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;ENST00000374359.1_1_10:46274511-46281094:+|nuORF	ENSG00000099290|ENST00000282633|WASHC2A	ENSG00000099290|ENST00000282633|WASHC2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.7742614746094	2	423.774003	845.533452	0.78695	0.00033349	-0.53769	-0.00022786	0.24926	0.00010563	423.7736904867861	16.288	0.21682	15.8	15.696	15.913	-0.48718					9	4	3	0	0	0	0.92457	1	113	113		47.916	1.9434	1	105830			650	1753	458	459	866	866					0.10450679139751173
AGTKKTKL	8	Unmodified	_AGTKKTKL_					0	0	0		ENSG00000099290|ENST00000282633|WASHC2A;nc|ENSG00000099290|Q641Q2-2|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;ENST00000374359.1_1_10:46274511-46281094:+|nuORF	ENSG00000099290|ENST00000282633|WASHC2A	ENSG00000099290|ENST00000282633|WASHC2A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.77392578125	2	423.774003	845.533452	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.341	1	15.742	15.242	16.242	-0.59873								0	0	0	0.29245	1	119	119		30.504	6.3009	1				651	1753	458	459	867	867					0.10450679139751173
AGTKTKTT	8	Unmodified	_AGTKTKTT_					0	0	0		ENST00000359856.10_1_1:183596533-183596665:-|nuORF	ENST00000359856.10_1_1:183596533-183596665:-|nuORF	ENST00000359856.10_1_1:183596533-183596665:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2313537597656	2	404.232168	806.449782	-1.2204	-0.00049332	3.4349	0.0013885	2.2146	0.00089519	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.80959	1	7934	7934		15.642	0.0055962	1	2752600			652	10437	459	460	868	868					0.03881522972039875
AGTLPQSH	8	Unmodified	_AGTLPQSH_					0	0	0		ENSG00000162897|ENST00000324852|FCAMR	ENSG00000162897|ENST00000324852|FCAMR	ENSG00000162897|ENST00000324852|FCAMR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2485656738281	2	405.70886	809.403166	1.7811	0.00072261	-2.0345	-0.0008254	-0.25336	-0.00010279	405.7078582620829	88.712	0.69301	89.161	88.753	89.446	0.44892					29	16	2	0	0	0	0.4196	1	10473	10473		7.1934	3.7833	1	764640			653	5748	460	461	869	869					-0.00915916859241861
AGTPGPAETPG	11	Unmodified	_AGTPGPAETPG_					0	0	0			REV__ENST00000204726.7_3_12:133398604-133398796:-|nuORF	REV__ENST00000204726.7_3_12:133398604-133398796:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.7283935546875	2	477.729989	953.445425	-0.83237	-0.00039765	-1.8574	-0.00088733	-2.6898	-0.001285	477.728935327791	97.786	0.95603	98.014	97.569	98.525	0.22788					49	21	3	0	0	0	0.70737	1	10128	10128		30.318	4.7437	1	466620	+		654	24099	461	462	870	870					-0.033159862415232055
AGTSRLRL	8	Unmodified	_AGTSRLRL_					0	0	0		ENST00000389054.7_1_5:140956325-140956376:-|nuORF	ENST00000389054.7_1_5:140956325-140956376:-|nuORF	ENST00000389054.7_1_5:140956325-140956376:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2647399902344	2	437.266876	872.519199	1.7622	0.00077054	-4.3406	-0.001898	-2.5785	-0.0011275	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.87922	1	846	846		31.955	1.4512	1	1079000			655	10989	462	463	871	871					0.0778402671146523
AGTSYRNVL	9	Unmodified	_AGTSYRNVL_					0	0	0		nc|ENSG00000003402|O15519-7|CFLAR;nc|ENSG00000003402|O15519-3|CFLAR;nc|ENSG00000003402|O15519-11|CFLAR;nc|ENSG00000003402|O15519-13|CFLAR;nc|ENSG00000003402|O15519-2|CFLAR;nc|ENSG00000003402|O15519-9|CFLAR;nc|ENSG00000003402|O15519-12|CFLAR;nc|ENSG00000003402|O15519-10|CFLAR;nc|ENSG00000003402|O15519-15|CFLAR;nc|ENSG00000003402|O15519-14|CFLAR;nc|ENSG00000003402|O15519-6|CFLAR;nc|ENSG00000003402|O15519-8|CFLAR;nc|ENSG00000003402|O15519-5|CFLAR;ENSG00000003402|ENST00000309955|CFLAR	nc|ENSG00000003402|O15519-7|CFLAR	nc|ENSG00000003402|O15519-7|CFLAR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.7611999511719	2	490.761623	979.508694	0.39762	0.00019514	-0.82472	-0.00040474	-0.42709	-0.0002096	490.7609277720333	21.58	0.58177	21.137	20.87	21.452	-0.44324					22	13	2	0	0	0	0.74721	1	797	797		37.159	5.6293	1	71860			656	14729	463	464	872	872					0.01811999266362818
AGTTHCPGH	9	Unmodified	_AGTTHCPGH_					0	0	0		ENST00000500118.2_1_8:6262544-6263480:-|nuORF	ENST00000500118.2_1_8:6262544-6263480:-|nuORF	ENST00000500118.2_1_8:6262544-6263480:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.25628662109375	2	440.690144	879.365735	0.09853	4.3421E-05	-0.45672	-0.00020127	-0.35819	-0.00015785	440.6897664690378	77.114	0.87977	77.682	77.379	78.259	0.56836					34	20	2	0	0	0	0.20789	1	8790	8790		17.365	0	1	387050			657	12837	464	465	873	873					-0.07877331396502996
AGVAWVAPL	9	Unmodified	_AGVAWVAPL_					0	0	0		ENST00000484153.1_1_1:11826815-11837330:+|nuORF;ENSG00000215910|ENST00000688073|C1orf167;nc|nan|Q5SNV9-2|C1orf167;nc|nan|Q5SNV9-3|C1orf167	ENST00000484153.1_1_1:11826815-11837330:+|nuORF	ENST00000484153.1_1_1:11826815-11837330:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.3141174316406	2	442.255446	882.496338	0.28068	0.00012413	-2.409	-0.0010654	-2.1283	-0.00094125	442.25421391305235	20.537	0.50221	20.078	19.778	20.28	-0.4591					14	10	2	0	0	0	0.20789	1	640	640		39.021	17.319	1	21550			658	8656	465	466	874	874					0.05039007593984479
AGVDIVLLCV	10	Unmodified	_AGVDIVLLCV_					0	0	0		nc|ENSG00000073150|Q96RD6-2|PANX2;nc|ENSG00000073150|Q96RD6-1|PANX2;ENSG00000073150|ENST00000395842|PANX2	nc|ENSG00000073150|Q96RD6-2|PANX2	nc|ENSG00000073150|Q96RD6-2|PANX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904968261719	2	501.288628	1000.5627	0.65623	0.00032896	2.7707	0.0013889	3.4269	0.0017179	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.86305	1	8106	8106		31.955	4.0726	1	2931000			659	1289	466	467	875	875					0.06244455373735036
AGVGKQAGLP	10	Unmodified	_AGVGKQAGLP_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.26080322265625	2	449.261259	896.507966	-0.13632	-6.1244E-05	-1.331	-0.00059798	-1.4674	-0.00065923	449.26055039529075	68.162	1.4065	68.547	67.946	69.352	0.38483					66	33	3	0	0	0	0.85939	2	7490	7490;7503		29.15	3.0457	1	1822600	+		660	18793	467	468	876;877	876					0.055572046173210765
AGVGKQAGLP	10	Unmodified	_AGVGKQAGLP_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2606506347656	2	449.261259	896.507966	-1.6904	-0.00075944	0.29835	0.00013403	-1.3921	-0.0006254	449.2612435598619	72.23	1.3235	72.615	72.251	73.575	0.38582					73	31	3	0	0	0	0.86589	1	8059	8059		29.15	3.6994	1	1206100	+		661	18793	467	468	878	878					0.055572046173210765
AGVKFVTTMV	10	Oxidation (M)	_AGVKFVTTM(Oxidation (M))V_		AGVKFVTTM(1)V		AGVKFVTTM(64)V	0	0	1			REV__nc|ENSG00000113441|Q9UIQ6-3|LNPEP	REV__nc|ENSG00000113441|Q9UIQ6-3|LNPEP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.7935180664062	2	534.791535	1067.56852	0.10361	5.5408E-05	3.7424	0.0020014	3.846	0.0020568	534.7932428250656	16.223	0.18595	15.624	15.508	15.694	-0.59873					6	3	2	0	0	0	0.3985	1	105	105		64.207	12.872	1	140840	+		662	17996	468	469	879	879		261			0.0374355388537424
AGVRFIGP	8	Unmodified	_AGVRFIGP_					0	0	0		ENSG00000173599|ENST00000393960|PC;nc|ENSG00000173599|P11498-2|PC	ENSG00000173599|ENST00000393960|PC	ENSG00000173599|ENST00000393960|PC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7394104003906	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.73619	1	1922	1922		65.897	19.131	1	1654100			663	6875	469	470	880	880					0.0502585427974509
AGVRKPKL	8	Unmodified	_AGVRKPKL_					0	0	0			REV__ENST00000443199.6_1_17:73623504-73629591:-|nuORF	REV__ENST00000443199.6_1_17:73623504-73629591:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7802429199219	2	434.789987	867.565421	0.37514	0.00016311	3.5009	0.0015222	3.876	0.0016853	434.7914447737877	36.127	0.16116	36.409	36.268	36.429	0.28173					5	3	2	0	0	0	0.4196	1	2803	2803		20.482	1.1219	1	67793	+		664	17713	470	471	881	881					0.12634091613551846
AGVSKLLK	8	Unmodified	_AGVSKLLK_					0	0	0			REV__nc|ENSG00000135679|Q00987-7|MDM2	REV__nc|ENSG00000135679|Q00987-7|MDM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.2711181640625	2	408.271096	814.527639	0.55277	0.00022568	-0.26667	-0.00010887	0.2861	0.00011681	408.27086164500804	29.128	0.98776	28.955	28.547	29.535	-0.17336					46	22	3	0	0	0	0.36381	2	1834	1808;1834		94.006	3.2298	1	1086600	+		665	19239	471	472	882;883	883					0.11295580628086554
AGVVAQARSV	10	Unmodified	_AGVVAQARSV_					0	0	0		nc|ENSG00000112874|Q9BQG2-2|NUDT12;ENSG00000112874|ENST00000230792|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2778625488281	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.63899	1	8212	8212		47.96	6.5329	1	2070000			666	2685	472	473	884	884					0.060319920203255606
AGVVQYSH	8	Unmodified	_AGVVQYSH_					0	0	0		ENSG00000142156|ENST00000361866|COL6A1;ENST00000498614.5_1_21:47421141-47423924:+|nuORF	ENSG00000142156|ENST00000361866|COL6A1	ENSG00000142156|ENST00000361866|COL6A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2974853515625	2	430.716685	859.418816	-0.30252	-0.0001303	1.4762	0.00063584	1.1737	0.00050554	430.7171149631548	38.3	0.47591	38.642	38.341	38.817	0.34187					16	11	2	0	0	0	0.4196	1	3137	3137		6.7355	0	1	86136			667	4544	473	474	885	885					-0.016516303422008605
AGYTPVGMKY	10	Unmodified	_AGYTPVGMKY_					0	0	0			REV__nc|ENSG00000172795|Q8IU60-2|DCP2	REV__nc|ENSG00000172795|Q8IU60-2|DCP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.2753295898438	2	543.76806	1085.52157	0.92776	0.00050449	3.3643	0.0018294	4.2921	0.0023339	543.7698352004945	22.722	0.43309	22.672	22.403	22.836	-0.050077					24	17	2	0	0	0	0.84112	1	703	703		37.159	0	1	39420	+		668	21857	474	475	886	886					-0.01777305665723361
AHALRTHGY	9	Unmodified	_AHALRTHGY_					0	0	0		ENSG00000171532|ENST00000302584|NEUROD2	ENSG00000171532|ENST00000302584|NEUROD2	ENSG00000171532|ENST00000302584|NEUROD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.2691040039062	2	513.267407	1024.52026	-0.34568	-0.00017743	2.2692	0.0011647	1.9235	0.00098729	513.2681850311778	76.031	0.90755	76.156	75.674	76.581	0.12485					50	27	3	0	0	0	0.78058	1	7087	7087		30.504	6.3009	1	111040			669	6680	475	476	887	887					0.008982410803582752
AHDDRRRRKRL	11	Unmodified	_AHDDRRRRKRL_					0	0	0			REV__ENST00000310450.8_1_20:19998006-20003102:+|nuORF	REV__ENST00000310450.8_1_20:19998006-20003102:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.9548034667969	3	493.622296	1477.84506	-0.044384	-2.1909E-05	-2.5858	-0.0012764	-2.6302	-0.0012983	493.6209196316135	30.773	0.86895	30.776	30.448	31.317	0.0037212					49	19	4	0	0	0	0.77511	1	2057	2057		16.53	1.1924	1	413490	+		670	24888	476	477	888	888					0.12524981217188724
AHDKVKLF	8	Unmodified	_AHDKVKLF_					0	0	0		ENSG00000116525|ENST00000291416|TRIM62	ENSG00000116525|ENST00000291416|TRIM62	ENSG00000116525|ENST00000291416|TRIM62	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27789306640625	2	479.279452	956.544351	-0.90579	-0.00043413	-2.9645	-0.0014208	-3.8703	-0.001855	479.2779542538447	97.646	1.4109	97.646	97.118	98.528	0					77	33	3	0	0	0	0.85277	1	9821	9821		25.45	1.2474	1	589630			671	2923	477	478	889	889					0.06434081514055379
AHDPLLPFS	9	Unmodified	_AHDPLLPFS_					0	0	0			REV__nc|ENSG00000156194|O14830-2|PPEF2	REV__nc|ENSG00000156194|O14830-2|PPEF2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.7601318359375	2	498.761092	995.507631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.206	1	31.195	30.695	31.695	-0.010656								0	0	0	0.30053	1	1689	1689		30.504	5.0535	1		+		672	20472	478	479	890	890					0.009697848974724366
AHECVQLH	8	Unmodified	_AHECVQLH_					0	0	0			REV__ENST00000313468.9_1_11:67798160-67800438:+|nuORF	REV__ENST00000313468.9_1_11:67798160-67800438:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.7227783203125	2	468.721444	935.428335	0.56744	0.00026597	3.2365	0.001517	3.8039	0.001783	468.72291499922926	77.981	1.1018	78.118	77.808	78.91	0.13667					89	33	4	0	0	0	0.88915	1	7365	7365		35.201	3.6709	1	747220	+		673	24923	479	480	891	891					-0.041961853283282835
AHECVQLH	8	Unmodified	_AHECVQLH_					0	0	0			REV__ENST00000313468.9_1_11:67798160-67800438:+|nuORF	REV__ENST00000313468.9_1_11:67798160-67800438:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7230224609375	2	468.721444	935.428335	-0.58063	-0.00027215	3.794	0.0017783	3.2134	0.0015062	468.72346030200146	77.011	2.0488	77.579	77.289	79.337	0.56836					141	50	5	0	0	0	0.88915	1	8806	8806		35.201	4.883	1	13648000	+		674	24923	479	480	892	892					-0.041961853283282835
AHEKGGIY	8	Unmodified	_AHEKGGIY_					0	0	0			REV__ENSG00000011376|ENST00000645846|LARS2	REV__ENSG00000011376|ENST00000645846|LARS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2578125	2	437.72451	873.434466	0.48435	0.00021201	0.23694	0.00010371	0.72129	0.00031573	437.7242177639422	31.009	0.73355	31.012	30.753	31.486	0.0037193					31	16	3	0	0	0	0.4196	1	2073	2073		28.254	0	1	151840	+		675	16183	480	481	893	893					-0.007313438251344451
AHFSSKDKL	9	Unmodified	_AHFSSKDKL_					0	0	0		nc|ENSG00000164308|Q6P179-3|ERAP2;ENSG00000164308|ENST00000437043|ERAP2;ENST00000513084.5_1_5:96245508-96253306:+|nuORF	nc|ENSG00000164308|Q6P179-3|ERAP2	nc|ENSG00000164308|Q6P179-3|ERAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7764892578125	2	516.777274	1031.53999	0.78656	0.00040648	1.0291	0.00053182	1.8157	0.0009383	516.776718800019	32.58	0.67962	32.791	32.465	33.144	0.21168					37	15	4	0	0	0	0.39977	1	2290	2290		57.811	1.0902	1	423530			676	5952	481	482	894	894					0.02548572300474916
AHGGQDEH	8	Unmodified	_AHGGQDEH_					0	0	0		ENST00000529009.1_3_8:145722059-145722696:+|nuORF;ENST00000292539.8_1_8:145722273-145722696:+|nuORF;ENST00000526183.5_1_8:145722273-145723094:+|nuORF	ENST00000529009.1_3_8:145722059-145722696:+|nuORF	ENST00000529009.1_3_8:145722059-145722696:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.77459716796875	2	425.675548	849.336543	0.57654	0.00024542	3.9745	0.0016919	4.5511	0.0019373	425.678199369827	37.528	0.23051	38.014	37.87	38.101	0.48581					7	5	2	0	0	0	0.4196	1	3043	3043		18.324	0	1	38515			677	9690	482	483	895	895					-0.09415152421149742
AHGGRALAS	9	Unmodified	_AHGGRALAS_					0	0	0		ENST00000421767.1_1_7:65841945-65842656:-|nuORF	ENST00000421767.1_1_7:65841945-65842656:-|nuORF	ENST00000421767.1_1_7:65841945-65842656:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2275390625	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.51307	1	7403	7403		51.335	15.717	1	678130			678	11470	483	484	896	896					0.015265941262100569
AHGMDVRAS	9	Unmodified	_AHGMDVRAS_					0	0	0			REV__ENST00000484188.1_1_20:44992723-44992999:-|nuORF	REV__ENST00000484188.1_1_20:44992723-44992999:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2874755859375	2	472.224351	942.434149	-0.015174	-7.1656E-06	0.72095	0.00034045	0.70577	0.00033328	472.2249447033588	95.304	0.28438	95.351	95.169	95.454	0.046982					8	6	2	0	0	0	0.20789	1	10066	10066		44.117	19.914	1	50502	+		679	27506	484	485	897	897					-0.03937086816642932
AHIKRRHKRAR	11	Unmodified	_AHIKRRHKRAR_					0	0	0		ENSG00000175809|ENST00000323684|CBLL2	ENSG00000175809|ENST00000323684|CBLL2	ENSG00000175809|ENST00000323684|CBLL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.9683837890625	3	476.967627	1427.88105	-0.0047916	-2.2854E-06	1.7424	0.00083107	1.7376	0.00082879	476.9682840061405	28.251	0.79992	28.078	27.668	28.468	-0.17336					48	19	3	0	0	0	0.76892	1	1718	1718		17.833	4.3252	1	140260			680	7037	485	486	898	898					0.184224831847132
AHIYVEQKQ	9	Unmodified	_AHIYVEQKQ_					0	0	0		ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.2930908203125	2	558.29583	1114.57711	-0.62565	-0.0003493	-0.019272	-1.0759E-05	-0.64493	-0.00036006	558.2956194038452	42.739	0.63625	42.709	42.373	43.01	-0.029461					27	15	3	0	0	0	0.51307	1	3226	3226		51.335	3.3759	1	126890			681	8317	486	487	899	899					0.024402438462402642
AHIYVEQKQ	9	Unmodified	_AHIYVEQKQ_					0	0	0		ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.30029296875	2	558.29583	1114.57711	0.33482	0.00018693	-0.94508	-0.00052763	-0.61025	-0.0003407	558.2952047618751	42.576	0.59734	42.641	42.438	43.035	0.065033					28	16	3	0	0	0	0.76764	1	2886	2886		34.173	1.3601	1	213560			682	8317	486	487	900	900					0.024402438462402642
AHKLPFCR	8	Unmodified	_AHKLPFCR_					0	0	0			REV__ENST00000373880.8_1_10:61005408-61005564:+|nuORF	REV__ENST00000373880.8_1_10:61005408-61005564:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.26727294921875	2	486.265822	970.517091	-0.7424	-0.000361	3.2775	0.0015937	2.5351	0.0012327	486.2673170980509	86.118	3.9821	86.565	85.471	89.453	0.44736					252	97	4	0	0	0	0.884	1	10328	10328		33.516	0	1	1474100	+		683	25773	487	488	901	901					0.030652747019985327
AHKLTMPILAV	11	Unmodified	_AHKLTMPILAV_					0	0	0			REV__ENST00000572077.5_1_17:79354359-79359020:-|nuORF	REV__ENST00000572077.5_1_17:79354359-79359020:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.3583374023438	2	597.357376	1192.7002	0.94282	0.0005632	0.30511	0.00018226	1.2479	0.00074546	597.3571269689473	100.1	2.8225	100.31	99.04	101.86	0.21512					167	67	4	0	0	0	0.74763	1	10516	10516		22.58	3.4761	1	2588300	+		684	28938	488	489	902	902					0.11155783973163125
AHKSTKKTG	9	Unmodified	_AHKSTKKTG_					0	0	0			REV__ENSG00000186416|ENST00000688521|NKRF;REV__nc|ENSG00000186416|O15226-2|NKRF	REV__ENSG00000186416|ENST00000688521|NKRF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2779541015625	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.6204	1	8324	8324		45.972	5.1941	1	4644500	+		685	22850;30107	489	490	903	903					0.060319920203255606
AHKSTKKTG	9	Unmodified	_AHKSTKKTG_					0	0	0			REV__ENSG00000186416|ENST00000688521|NKRF;REV__nc|ENSG00000186416|O15226-2|NKRF	REV__ENSG00000186416|ENST00000688521|NKRF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2776794433594	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.78983	1	8162	8162		27.882	1.0861	1	2070000	+		686	22850;30107	489	490	904	904					0.060319920203255606
AHKSTKKTG	9	Unmodified	_AHKSTKKTG_					0	0	0			REV__ENSG00000186416|ENST00000688521|NKRF;REV__nc|ENSG00000186416|O15226-2|NKRF	REV__ENSG00000186416|ENST00000688521|NKRF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774658203125	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.76255	1	8423	8423		35.618	8.8222	1	6441000	+		687	22850;30107	489	490	905	905					0.060319920203255606
AHLATHGPE	9	Unmodified	_AHLATHGPE_					0	0	0		ENSG00000108771|ENST00000251642|DHX58;ENST00000586522.5_1_17:40255624-40263910:-|nuORF	ENSG00000108771|ENST00000251642|DHX58	ENSG00000108771|ENST00000251642|DHX58	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7336120605469	2	466.732866	931.451179	0.23559	0.00010996	2.6598	0.0012414	2.8953	0.0013514	466.7340279976939	23.781	0.81942	23.399	23.018	23.837	-0.38178					38	18	4	0	0	0	0.72402	1	1128	1128		38.806	5.2906	1	358980			688	2428	490	491	906	906					-0.017288429391896898
AHLCPACTVR	10	Unmodified	_AHLCPACTVR_					0	0	0			REV__ENST00000542401.1_1_12:14720929-14765813:+|nuORF	REV__ENST00000542401.1_1_12:14720929-14765813:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7647094726562	2	535.765329	1069.5161	-0.26567	-0.00014234	-0.0050937	-2.729E-06	-0.27077	-0.00014507	535.7651939368557	32.134	0.8588	32.261	31.775	32.634	0.12643					37	19	3	0	0	0	0.73395	1	2230	2230		42.864	3.6114	1	227540	+		689	28497	491	492	907	907					-0.01587307729209897
AHLDNLKGTF	10	Unmodified	_AHLDNLKGTF_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.29931640625	2	558.29583	1114.57711	-0.62565	-0.0003493	-0.019272	-1.0759E-05	-0.64493	-0.00036006	558.2956194038452	42.739	0.63625	42.709	42.373	43.01	-0.029461					27	15	3	0	0	0	0.73395	1	3203	3203		42.864	3.6114	1	126890			690	8826	492	493	908	908					0.02440243846217527
AHLDNLKGTF	10	Unmodified	_AHLDNLKGTF_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.2957153320312	2	558.29583	1114.57711	-0.31835	-0.00017773	-0.41031	-0.00022908	-0.72866	-0.00040681	558.2954211902571	42.717	0.57037	42.717	42.41	42.981	0.00016785					27	13	3	0	0	0	0.66675	1	3244	3244		46.457	10.838	1	131990			691	8826	492	493	909	909					0.02440243846217527
AHLDNLKGTF	10	Unmodified	_AHLDNLKGTF_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	558.2953491210938	2	558.29583	1114.57711	0.25943	0.00014484	-0.50456	-0.00028169	-0.24513	-0.00013686	558.2950666729502	42.655	0.57335	42.661	42.392	42.965	0.0057487					36	17	4	0	0	0	0.54701	1	2888	2888		52.937	13.684	1	180790			692	8826	492	493	910	910					0.02440243846217527
AHLDNLKGTF	10	Unmodified	_AHLDNLKGTF_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.2947998046875	2	558.29583	1114.57711	0.33482	0.00018693	-0.94508	-0.00052763	-0.61025	-0.0003407	558.2952047618751	42.576	0.59734	42.641	42.438	43.035	0.065033					28	16	3	0	0	0	0.49268	1	2876	2876		56.434	5.0983	1	213560			693	8826	492	493	911	911					0.02440243846217527
AHLGTRAN	8	Unmodified	_AHLGTRAN_					0	0	0			REV__chr4:137528820-137532276|23|12.17|0.06|7.55|-|2|PCDH18,None|1	REV__chr4:137528820-137532276|23|12.17|0.06|7.55|-|2|PCDH18,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.22784423828125	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.85277	1	8181	8181		25.45	0	1	888480	+		694	15821	493	494	912	912					0.015265941262214255
AHLGTRAN	8	Unmodified	_AHLGTRAN_					0	0	0			REV__chr4:137528820-137532276|23|12.17|0.06|7.55|-|2|PCDH18,None|1	REV__chr4:137528820-137532276|23|12.17|0.06|7.55|-|2|PCDH18,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.22747802734375	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.87479	1	7537	7537		30.504	2.2494	1	831720	+		695	15821	493	494	913	913					0.015265941262214255
AHLHVKGRQ	9	Unmodified	_AHLHVKGRQ_					0	0	0		ENST00000330175.8_2_17:48188692-48189373:-|nuORF	ENST00000330175.8_2_17:48188692-48189373:-|nuORF	ENST00000330175.8_2_17:48188692-48189373:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.304324	1044.5941	-1.5391	-0.00080541	0.37155	0.00019443	-1.1675	-0.00061098	523.3043931360254	91.382	2.3991	91.563	91.237	93.636	0.18029					145	56	4	0	0	0	0.64922	1	9198	9198		44.117	0	1	1040100			696	10106	494	495	914	914					0.0735820924271593
AHLLICLKIKT	11	Unmodified	_AHLLICLKIKT_					0	0	0			REV__ENSG00000168811|ENST00000699704|IL12A	REV__ENSG00000168811|ENST00000699704|IL12A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.26605224609375	3	418.265176	1251.7737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.202	1	15.603	15.103	16.103	-0.59873								0	0	0	0.56276	1	101	101		17.833	1.1158	1		+		697	21522	495	496	915	915					0.157883324156046
AHLLVRGGH	9	Unmodified	_AHLLVRGGH_					0	0	0			REV__ENST00000586572.1_3_19:2737154-2737346:-|nuORF	REV__ENST00000586572.1_3_19:2737154-2737346:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.2806396484375	2	480.280318	958.546083	2.5491	0.0012243	-1.7452	-0.00083817	0.80389	0.00038609	480.27933712868145	99.942	0.96339	99.888	99.524	100.49	-0.053741					33	21	2	0	0	0	0.49378	1	10825	10825		52.299	9.8247	1	200640	+		698	29106	496	497	916	916					0.06515135322661081
AHLLVRGGH	9	Unmodified	_AHLLVRGGH_					0	0	0			REV__ENST00000586572.1_3_19:2737154-2737346:-|nuORF	REV__ENST00000586572.1_3_19:2737154-2737346:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	480.280318	958.546083	-0.51111	-0.00024547	1.3839	0.00066464	0.87276	0.00041917	480.28072280797545	99.721	0.87345	99.768	99.422	100.3	0.047523	0.04973	0.0010653	NaN	52.299	34	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183690	+		699	29106	496	497							0.06515135322661081
AHLRESAN	8	Unmodified	_AHLRESAN_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2322082519531	2	449.230491	896.446428	-1.619	-0.00072729	1.9511	0.00087651	0.33216	0.00014922	449.23133844286133	83.319	3.7519	83.457	82.118	85.87	0.13811					166	86	3	0	0	0	0.89043	1	7928	7928		35.618	5.1146	1	160270			700	6309	497	498	917	917					-0.0059372708195724044
AHLRGKSD	8	Unmodified	_AHLRGKSD_					0	0	0			REV__ENSG00000168334|ENST00000340369|XIRP1	REV__ENSG00000168334|ENST00000340369|XIRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.24072265625	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.91977	1	8314	8314		45.952	3.5558	1	1238700	+		701	21480	498	499	918	918					0.021228632977113193
AHLRGKSD	8	Unmodified	_AHLRGKSD_					0	0	0			REV__ENSG00000168334|ENST00000340369|XIRP1	REV__ENSG00000168334|ENST00000340369|XIRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2406921386719	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.87479	1	7770	7770		30.504	2.2494	1	1219900	+		702	21480	498	499	919	919					0.021228632977113193
AHLTFVLWE	9	Unmodified	_AHLTFVLWE_					0	0	0		ENST00000430020.5_1_3:9704013-9725062:+|nuORF	ENST00000430020.5_1_3:9704013-9725062:+|nuORF	ENST00000430020.5_1_3:9704013-9725062:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.2977294921875	2	558.297842	1114.58113	-0.69832	-0.00038987	-3.8338	-0.0021404	-4.5321	-0.0025303	558.2955770012961	42.686	0.52574	42.648	42.357	42.882	-0.038223					24	12	3	0	0	0	0.69914	1	3302	3302		40.573	6.4001	1	226640			703	11623	499	500	920	920					0.028423333399587136
AHLTKKLLD	9	Unmodified	_AHLTKKLLD_					0	0	0		ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.13916015625	2	519.818941	1037.62333	0.030338	1.577E-05	-1.4893	-0.00077415	-1.4589	-0.00075838	519.8180982003502	80.854	0.52762	81.38	81.12	81.647	0.52676					19	12	2	0	0	0	0.20789	1	9356	9356		16.473	1.809	1	237440			704	1800	500	501	921	921					0.10602308748320866
AHLVKAQFI	9	Unmodified	_AHLVKAQFI_					0	0	0		nc|ENSG00000165617|Q9NYF0|DACT1;ENSG00000165617|ENST00000395153|DACT1;chr14:58639262-58640736|38|14.92|0.81|4.21|+|ENST00000541264|DACT1,DACT1	nc|ENSG00000165617|Q9NYF0|DACT1	nc|ENSG00000165617|Q9NYF0|DACT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8074340820312	2	513.808377	1025.6022	-0.038079	-1.9565E-05	1.3781	0.00070808	1.34	0.00068852	513.8090107774265	57.263	2.0786	57.251	56.87	58.948	-0.012203					104	72	2	0	0	0	0.7932	1	5182	5182		24.203	5.8783	1	172740			705	6100	501	502	922	922					0.09042343439477918
AHLVLEQQ	8	Unmodified	_AHLVLEQQ_					0	0	0			REV__ENST00000372734.3_1_10:76153983-76158239:+|nuORF	REV__ENST00000372734.3_1_10:76153983-76158239:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	469.25970458984375	2	469.258717	936.50288	-2.0114	-0.00094387	2.3068	0.0010825	0.29543	0.00013863	469.25963419268345	25.506	0.4877	25.506	25.244	25.731	0					33	22	2	0	0	0	0.86791	1	928	928		28.254	2.8041	1	50890	+		706	25730	502	503	923	923					0.032089007547028814
AHLVLEQQ	8	Unmodified	_AHLVLEQQ_					0	0	0			REV__ENST00000372734.3_1_10:76153983-76158239:+|nuORF	REV__ENST00000372734.3_1_10:76153983-76158239:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	469.258717	936.50288	-2.0114	-0.00094387	2.3068	0.0010825	0.29543	0.00013863	469.25963419268345	25.506	0.4877	25.506	25.244	25.731	0	-0.012971	0.0015228	NaN	28.254	33	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50890	+		707	25730	502	503							0.032089007547028814
AHLVLEQQ	8	Unmodified	_AHLVLEQQ_					0	0	0			REV__ENST00000372734.3_1_10:76153983-76158239:+|nuORF	REV__ENST00000372734.3_1_10:76153983-76158239:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	469.258717	936.50288	-1.0916	-0.00051224	1.8814	0.00088286	0.78982	0.00037063	469.2594088031984	25.558	0.59594	25.621	25.353	25.949	0.063124	0.10144	0.0011235	NaN	28.254	40	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69462	+		708	25730	502	503							0.032089007547028814
AHLVLEQQ	8	Unmodified	_AHLVLEQQ_					0	0	0			REV__ENST00000372734.3_1_10:76153983-76158239:+|nuORF	REV__ENST00000372734.3_1_10:76153983-76158239:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	469.258717	936.50288	0.51484	0.00024159	0.045602	2.1399E-05	0.56044	0.00026299	469.2585758795351	25.297	0.49613	25.321	25.106	25.603	0.024021	-0.1983	-0.00059941	NaN	28.254	41	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85625	+		709	25730	502	503							0.032089007547028814
AHPGRPLH	8	Unmodified	_AHPGRPLH_					0	0	0			REV__ENST00000332438.4_1_17:40831559-40832345:-|nuORF	REV__ENST00000332438.4_1_17:40831559-40832345:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7448425292969	2	442.746111	883.477669	0.70525	0.00031225	-3.6345	-0.0016091	-2.9292	-0.0012969	442.7443686579111	91.271	2.0811	91.72	90.611	92.692	0.44958					87	49	3	0	0	0	0.92774	1	10818	10818		49.211	4.6797	1	3166400	+		710	25139	503	504	924	924					0.03126890742805699
AHPNLPSVP	9	Unmodified	_AHPNLPSVP_					0	0	0		nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L;chr3:151158799-151159832|38|10.24|0.6|4.1|+|ENST00000474524|MED12L,MED12L;chr3:151156330-151158689|37|12.46|0.65|4.25|+|ENST00000474524|MED12L,MED12L;chr3:151127984-151156161|35|11.06|0.63|4.13|+|ENST00000474524|MED12L,MED12L;chr3:151122974-151127825|32|10.59|0.42|4.64|+|ENST00000474524|MED12L,MED12L;ENSG00000144893|ENST00000687756|MED12L	nc|ENSG00000144893|Q86YW9-4|MED12L	nc|ENSG00000144893|Q86YW9-4|MED12L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.25433349609375	2	466.253434	930.492316	-0.31362	-0.00014623	1.3302	0.0006202	1.0166	0.00047398	466.2538933485573	65.465	0.96945	65.43	64.524	65.494	-0.034798					62	36	2	0	0	0	0.76996	1	6276	6276		33.516	0	1	189960			711	393	504	505	925	925					0.024289181002814075
AHPVAVASK	9	Unmodified	_AHPVAVASK_					0	0	0		nc|ENSG00000141644|Q9UIS9-8|MBD1;nc|ENSG00000141644|Q9UIS9-6|MBD1;nc|ENSG00000141644|Q9UIS9-5|MBD1;nc|ENSG00000141644|Q9UIS9-10|MBD1;nc|ENSG00000141644|Q9UIS9-2|MBD1;ENSG00000141644|ENST00000269468|MBD1;nc|ENSG00000141644|Q9UIS9-9|MBD1;nc|ENSG00000141644|Q9UIS9-12|MBD1;ENST00000589867.2_1_18:47803200-47806373:-|nuORF;nc|ENSG00000141644|Q9UIS9-4|MBD1;nc|ENSG00000141644|Q9UIS9-11|MBD1;nc|ENSG00000141644|Q9UIS9-7|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2552795410156	2	440.255977	878.497401	-0.77584	-0.00034157	-0.60845	-0.00026787	-1.3843	-0.00060944	440.2555338986884	74.395	0.77566	74.786	74.541	75.317	0.39111					44	18	3	0	0	0	0.7932	1	8394	8394		25.574	0.12388	1	590790			712	4520	505	506	926	926					0.05329221962892916
AHPVAVASK	9	Unmodified	_AHPVAVASK_					0	0	0		nc|ENSG00000141644|Q9UIS9-8|MBD1;nc|ENSG00000141644|Q9UIS9-6|MBD1;nc|ENSG00000141644|Q9UIS9-5|MBD1;nc|ENSG00000141644|Q9UIS9-10|MBD1;nc|ENSG00000141644|Q9UIS9-2|MBD1;ENSG00000141644|ENST00000269468|MBD1;nc|ENSG00000141644|Q9UIS9-9|MBD1;nc|ENSG00000141644|Q9UIS9-12|MBD1;ENST00000589867.2_1_18:47803200-47806373:-|nuORF;nc|ENSG00000141644|Q9UIS9-4|MBD1;nc|ENSG00000141644|Q9UIS9-11|MBD1;nc|ENSG00000141644|Q9UIS9-7|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	440.255977	878.497401	-0.15765	-6.9408E-05	-1.4128	-0.00062197	-1.5704	-0.00069138	440.2552525857599	75.108	0.54957	75.154	74.885	75.434	0.045959	0.19667	-0.00012341	NaN	25.574	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58847			713	4520	505	506							0.05329221962892916
AHPVAVASK	9	Unmodified	_AHPVAVASK_					0	0	0		nc|ENSG00000141644|Q9UIS9-8|MBD1;nc|ENSG00000141644|Q9UIS9-6|MBD1;nc|ENSG00000141644|Q9UIS9-5|MBD1;nc|ENSG00000141644|Q9UIS9-10|MBD1;nc|ENSG00000141644|Q9UIS9-2|MBD1;ENSG00000141644|ENST00000269468|MBD1;nc|ENSG00000141644|Q9UIS9-9|MBD1;nc|ENSG00000141644|Q9UIS9-12|MBD1;ENST00000589867.2_1_18:47803200-47806373:-|nuORF;nc|ENSG00000141644|Q9UIS9-4|MBD1;nc|ENSG00000141644|Q9UIS9-11|MBD1;nc|ENSG00000141644|Q9UIS9-7|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	440.255977	878.497401	-0.37182	-0.0001637	-0.5893	-0.00025944	-0.96112	-0.00042314	440.2553721110274	75.165	0.49988	75.119	74.793	75.293	-0.045982	0.16093	0.00060165	NaN	25.574	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60860			714	4520	505	506							0.05329221962892916
AHPVAVASK	9	Unmodified	_AHPVAVASK_					0	0	0		nc|ENSG00000141644|Q9UIS9-8|MBD1;nc|ENSG00000141644|Q9UIS9-6|MBD1;nc|ENSG00000141644|Q9UIS9-5|MBD1;nc|ENSG00000141644|Q9UIS9-10|MBD1;nc|ENSG00000141644|Q9UIS9-2|MBD1;ENSG00000141644|ENST00000269468|MBD1;nc|ENSG00000141644|Q9UIS9-9|MBD1;nc|ENSG00000141644|Q9UIS9-12|MBD1;ENST00000589867.2_1_18:47803200-47806373:-|nuORF;nc|ENSG00000141644|Q9UIS9-4|MBD1;nc|ENSG00000141644|Q9UIS9-11|MBD1;nc|ENSG00000141644|Q9UIS9-7|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	440.255977	878.497401	-1.4738	-0.00064887	0.086968	3.8288E-05	-1.3869	-0.00061058	440.25587856693164	74.805	0.55187	74.931	74.623	75.175	0.12545	-0.02712	0.0011971	NaN	25.574	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84320			715	4520	505	506							0.05329221962892916
AHPVAVASK	9	Unmodified	_AHPVAVASK_					0	0	0		nc|ENSG00000141644|Q9UIS9-8|MBD1;nc|ENSG00000141644|Q9UIS9-6|MBD1;nc|ENSG00000141644|Q9UIS9-5|MBD1;nc|ENSG00000141644|Q9UIS9-10|MBD1;nc|ENSG00000141644|Q9UIS9-2|MBD1;ENSG00000141644|ENST00000269468|MBD1;nc|ENSG00000141644|Q9UIS9-9|MBD1;nc|ENSG00000141644|Q9UIS9-12|MBD1;ENST00000589867.2_1_18:47803200-47806373:-|nuORF;nc|ENSG00000141644|Q9UIS9-4|MBD1;nc|ENSG00000141644|Q9UIS9-11|MBD1;nc|ENSG00000141644|Q9UIS9-7|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	440.255977	878.497401	0.19593	8.6259E-05	-1.6575	-0.00072971	-1.4615	-0.00064345	440.2551146527056	74.271	0.95056	74.83	74.543	75.493	0.55891	-0.12784	-0.00033889	NaN	25.574	48	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	711020			716	4520	505	506							0.05329221962892916
AHQCLKTIVKK	11	Unmodified	_AHQCLKTIVKK_					0	0	0		ENSG00000186047|ENST00000504404|DLEU7	ENSG00000186047|ENST00000504404|DLEU7	ENSG00000186047|ENST00000504404|DLEU7	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8785400390625	2	634.879007	1267.74346	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.91	1	112.84	112.34	113.34	-0.067215								0	0	0	0.56276	1	12257	12257		22.58	0.61977	1				717	7769	506	507	927	927					0.12029973750418321
AHQCRENL	8	Unmodified	_AHQCRENL_					0	0	0		ENSG00000049283|ENST00000268933|EPN3;ENST00000512379.5_1_17:48610205-48619515:+|nuORF;nc|ENSG00000049283|Q9H201-2|EPN3;ENST00000512291.5_1_17:48613811-48618261:+|nuORF	ENSG00000049283|ENST00000268933|EPN3	ENSG00000049283|ENST00000268933|EPN3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.2880554199219	2	485.7298	969.445048	-1.9482	-0.0009463	1.8648	0.00090581	-0.083351	-4.0486E-05	485.73035655261924	71.95	0.37755	71.99	71.774	72.151	0.040222					21	16	2	0	0	0	0.4196	1	6893	6893		38.806	13.356	1	57961			718	984	507	508	928	928					-0.040896844423627954
AHRLGVIFL	9	Unmodified	_AHRLGVIFL_					0	0	0		ENST00000607145.1_1_1:11090124-11090397:+|nuORF	ENST00000607145.1_1_1:11090124-11090397:+|nuORF	ENST00000607145.1_1_1:11090124-11090397:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3189086914062	2	513.316369	1024.61818	-0.56742	-0.00029127	1.1983	0.00061511	0.63088	0.00032384	513.8184352321304	55.37	1.1164	55.4	54.998	56.114	0.030838					47	27	2	0	0	0	0.7932	1	4954	4954		24.203	2.2429	1	233220			719	14459	508	509	929	929					0.10686049676360199
AHRLIGRKLTS	11	Unmodified	_AHRLIGRKLTS_					0	0	0		ENST00000525276.1_1_11:70261940-70262195:+|nuORF	ENST00000525276.1_1_11:70261940-70262195:+|nuORF	ENST00000525276.1_1_11:70261940-70262195:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3903198242188	2	626.385845	1250.75714	-0.053222	-3.3338E-05	0.92804	0.00058131	0.87481	0.00054797	626.386012542859	108.09	0.33427	108.09	107.96	108.29	0					20	13	2	0	0	0	0.75495	1	11256	11256		20.947	0	1	1764100			720	13232	509	510	930	930					0.14178967573889167
AHRLIGRKLTS	11	Unmodified	_AHRLIGRKLTS_					0	0	0		ENST00000525276.1_1_11:70261940-70262195:+|nuORF	ENST00000525276.1_1_11:70261940-70262195:+|nuORF	ENST00000525276.1_1_11:70261940-70262195:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3905639648438	2	626.385845	1250.75714	0.92654	0.00058037	-0.26319	-0.00016486	0.66335	0.00041551	626.3854005656832	109.98	1.1023	110.05	109.78	110.88	0.073685					78	37	4	0	0	0	0.69995	1	11862	11862		31.53	10.583	1	2583100			721	13232	509	510	931	931					0.14178967573889167
AHRLIGRKLTS	11	Unmodified	_AHRLIGRKLTS_					0	0	0		ENST00000525276.1_1_11:70261940-70262195:+|nuORF	ENST00000525276.1_1_11:70261940-70262195:+|nuORF	ENST00000525276.1_1_11:70261940-70262195:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3898315429688	2	626.385845	1250.75714	-1.2033	-0.00075372	2.5834	0.0016182	1.3801	0.00086446	626.3871390536368	109.94	1.1883	109.95	109.68	110.87	0.0060501					79	40	3	0	0	0	0.75921	1	11710	11710		19.997	0.6368	1	879220			722	13232	509	510	932	932					0.14178967573889167
AHRLIGRKLTS	11	Unmodified	_AHRLIGRKLTS_					0	0	0		ENST00000525276.1_1_11:70261940-70262195:+|nuORF	ENST00000525276.1_1_11:70261940-70262195:+|nuORF	ENST00000525276.1_1_11:70261940-70262195:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3897094726562	2	626.385845	1250.75714	2.3128	0.0014487	-2.3561	-0.0014758	-0.043276	-2.7107E-05	626.8860681580434	110.01	1.5052	110.06	109.66	111.17	0.054062					106	56	2	0	0	0	0.72228	1	13330	13330		27.882	3.3631	1	1083000			723	13232	509	510	933	933					0.14178967573889167
AHRQRVSTL	9	Unmodified	_AHRQRVSTL_					0	0	0		nc|ENSG00000058453|Q5TZA2-2|CROCC	nc|ENSG00000058453|Q5TZA2-2|CROCC	nc|ENSG00000058453|Q5TZA2-2|CROCC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.6530151367188	2	534.307064	1066.59957	0.061063	3.2626E-05	1.6411	0.00087683	1.7021	0.00090946	534.3071501918564	17.178	0.27701	16.567	16.429	16.706	-0.6107					7	5	2	0	0	0	0.20789	1	228	228		14.865	0	1	19365			724	14759	510	511	934	934					0.06893888034528572
AHRRGPTG	8	Unmodified	_AHRRGPTG_					0	0	0		ENSG00000169083|ENST00000374690|AR;nc|ENSG00000169083|P10275-3|AR;nc|ENSG00000169083|P10275-4|AR;ENST00000513847.5_1_X:66764886-66909456:+|nuORF	ENSG00000169083|ENST00000374690|AR	ENSG00000169083|ENST00000374690|AR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.74176025390625	2	426.233368	850.452182	0.53768	0.00022918	2.38	0.0010144	2.9177	0.0012436	426.2348026441125	79.015	0.14287	79.153	79.045	79.187	0.13883					5	3	2	0	0	0	0.4196	1	7476	7476		18.324	0	1	16804			725	6467	511	512	935	935					0.020974162203856395
AHRSLDQEGPK	11	Unmodified	_AHRSLDQEGPK_					0	0	0			REV__nc|ENSG00000165506|Q9NVR5-2|DNAAF2	REV__nc|ENSG00000165506|Q9NVR5-2|DNAAF2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.32080078125	2	619.317825	1236.6211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.659	1	75.747	75.247	76.247	0.087631								0	0	0	0.56276	1	7017	7017		26.063	1.5442	1		+		726	21188	512	513	936	936					0.012252282725512487
AHSDFLQKMD	10	Unmodified	_AHSDFLQKMD_					0	0	0		nc|ENSG00000175505|Q9UBD9-2|CLCF1;ENSG00000175505|ENST00000312438|CLCF1	nc|ENSG00000175505|Q9UBD9-2|CLCF1	nc|ENSG00000175505|Q9UBD9-2|CLCF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3325805664062	2	596.27678	1190.53901	-0.51329	-0.00030606	3.4598	0.002063	2.9465	0.0017569	596.276415981909	96.05	0.17335	96.097	96.008	96.181	0.046982					6	3	2	0	0	0	0.37624	1	10166	10166		31.53	0	1	21239			727	7022	513	514	937	937					-0.04864010130745555
AHSEVFTK	8	Unmodified	_AHSEVFTK_					0	0	0		ENSG00000095951|ENST00000379388|HIVEP1;nc|ENSG00000095951|P15822-2|HIVEP1;nc|ENSG00000095951|P15822-3|HIVEP1	ENSG00000095951|ENST00000379388|HIVEP1	ENSG00000095951|ENST00000379388|HIVEP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7517395019531	2	459.737617	917.460681	1.0891	0.0005007	3.9862	0.0018326	5.0753	0.0023333	459.7394057685685	23.688	0.59435	23.114	22.878	23.472	-0.57415					22	13	2	0	0	0	0.4196	1	1095	1095		35.618	5.1146	1	220920			728	1734	514	515	938	938					-0.0013507465365591997
AHSLPRAKS	9	Unmodified	_AHSLPRAKS_					0	0	0		nc|ENSG00000063176|Q9NRA0-4|SPHK2;nc|ENSG00000063176|Q9NRA0-2|SPHK2;ENSG00000063176|ENST00000245222|SPHK2;nc|ENSG00000063176|Q9NRA0-5|SPHK2;nc|ENSG00000063176|Q9NRA0-3|SPHK2	nc|ENSG00000063176|Q9NRA0-4|SPHK2	nc|ENSG00000063176|Q9NRA0-4|SPHK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7662353515625	2	483.777608	965.540663	0.94704	0.00045815	3.3529	0.0016221	4.3	0.0020802	483.7790464016001	36.654	0.24411	37.094	36.952	37.197	0.44043					6	5	2	0	0	0	0.20789	1	2906	2906		19.997	0	1	36457			729	1088	515	516	939	939					0.05651411740188905
AHSPRRGQG	9	Unmodified	_AHSPRRGQG_					0	0	0		ENST00000433078.5_1_7:86848977-86849826:-|nuORF	ENST00000433078.5_1_7:86848977-86849826:-|nuORF	ENST00000433078.5_1_7:86848977-86849826:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.2374572753906	2	483.254831	964.49511	-2.9206	-0.0014114	-4.0241	-0.0019447	-6.9448	-0.0033561	483.2525114850228	39.699	0.55757	39.708	39.343	39.9	0.0092773					15	12	2	0	0	0	0.20789	1	2813	2813		44.117	8.9161	1	137550			730	11680	516	517	940	940					0.011441862778156064
AHTSSSYLA	9	Unmodified	_AHTSSSYLA_					0	0	0		L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|14|1|sense	L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|14|1|sense	L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|14|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.722900390625	2	468.724707	935.43486	-1.3692	-0.00064178	-1.4353	-0.00067274	-2.8045	-0.0013145	468.72390435574425	78.099	1.043	78.193	77.873	78.916	0.0942					75	34	3	0	0	0	0.77546	1	7343	7343		31.955	4.0726	1	698450			731	14562	517	518	941	941					-0.03543968895939997
AHVARETSA	9	Unmodified	_AHVARETSA_					0	0	0		ENST00000465385.5_1_22:24122222-24125728:+|nuORF	ENST00000465385.5_1_22:24122222-24125728:+|nuORF	ENST00000465385.5_1_22:24122222-24125728:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.2422180175781	2	471.243598	940.472643	0.94832	0.00044689	-0.73063	-0.0003443	0.21769	0.00010258	471.243171462268	85.882	3.6525	85.808	84.627	88.28	-0.073761					151	84	2	0	0	0	0.7932	1	8858	8858		26.693	2.4902	1	287660			732	12110	518	519	942	942					2.542089509915968E-05
AHVDDMPNAL	10	Oxidation (M)	_AHVDDM(Oxidation (M))PNAL_		AHVDDM(1)PNAL		AHVDDM(64)PNAL	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.7479248046875	2	549.747856	1097.48116	0.12106	6.6554E-05	0.19259	0.00010588	0.31366	0.00017243	549.7477086279314	37.047	0.68826	37.071	36.83	37.518	0.023621					40	16	4	0	0	0	0.3985	3	2089	2089;2100;2113		64.207	21.733	1	477470			733	7934	519	520	943;944;945	943		136			-0.06368272056170099
AHVDDMPNAL	10	Oxidation (M)	_AHVDDM(Oxidation (M))PNAL_		AHVDDM(1)PNAL		AHVDDM(55)PNAL	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.748046875	2	549.747856	1097.48116	0.27504	0.0001512	-0.084522	-4.6466E-05	0.19052	0.00010474	549.7476357023818	36.848	0.64654	36.947	36.637	37.283	0.099277					36	16	3	0	0	0	0.51302	1	2071	2071		54.776	20.855	1	640410			734	7934	519	520	946	946		136			-0.06368272056170099
AHVDDMPNAL	10	Oxidation (M)	_AHVDDM(Oxidation (M))PNAL_		AHVDDM(1)PNAL		AHVDDM(59)PNAL	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.7482299804688	2	549.747856	1097.48116	0.36181	0.00019891	-0.13495	-7.419E-05	0.22686	0.00012472	549.7475662768516	36.994	0.80738	36.934	36.596	37.403	-0.060337					42	21	3	0	0	0	0.46422	2	2072	2072;2082		58.782	17.355	1	505560			735	7934	519	520	947;948	947		136			-0.06368272056170099
AHVDDMPNAL	10	Oxidation (M)	_AHVDDM(Oxidation (M))PNAL_					0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	549.747856	1097.48116	-0.25631	-0.00014091	0.35382	0.00019451	0.097505	5.3603E-05	549.748228214974	37.017	0.44212	36.963	36.783	37.226	-0.053558	-0.013098	0.00045821	NaN	64.207	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25600			736	7934	519	520				136			-0.06368272056170099
AHVDDMPNAL	10	Oxidation (M)	_AHVDDM(Oxidation (M))PNAL_					0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	549.747856	1097.48116	-0.2455	-0.00013497	0.16334	8.9794E-05	-0.082167	-4.5171E-05	549.7476093146763	36.689	0.49366	36.971	36.681	37.175	0.28173	-0.0053046	0.00024878	NaN	64.207	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94822			737	7934	519	520				136			-0.06368272056170099
AHVDDMPNAL	10	Oxidation (M)	_AHVDDM(Oxidation (M))PNAL_					0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	549.747856	1097.48116	1.2611	0.00069326	-1.305	-0.00071741	-0.043925	-2.4148E-05	549.7468335569006	36.532	0.45135	36.972	36.786	37.238	0.44043	-0.0042965	-0.0013656	NaN	64.207	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69444			738	7934	519	520				136			-0.06368272056170099
AHVQPKPAP	9	Unmodified	_AHVQPKPAP_					0	0	0		ENSG00000184675|ENST00000374869|AMER1;nc|ENSG00000184675|Q5JTC6-2|AMER1	ENSG00000184675|ENST00000374869|AMER1	ENSG00000184675|ENST00000374869|AMER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7665100097656	2	472.769252	943.52395	-0.93597	-0.0004425	-3.5256	-0.0016668	-4.4616	-0.0021093	472.7674891607628	81.886	2.6588	82.031	80.209	82.868	0.14512					108	66	2	0	0	0	0.7932	1	7773	7773		25.45	3.4903	1	189560			739	7637	520	521	949	949					0.04992910854218735
AHVRFKPTLSQ	11	Unmodified	_AHVRFKPTLSQ_					0	0	0		CON__Q3T052	CON__Q3T052	CON__Q3T052	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.367431640625	2	642.364579	1282.7146	-0.042196	-2.7105E-05	-2.5283	-0.0016241	-2.5705	-0.0016512	642.3635952564791	110.33	1.0043	110.28	110.08	111.09	-0.055077					98	36	3	0	0	0	0.7144	1	12049	12049		29.17	4.6509	1	348750		+	740	622	521	522	950	950					0.0845557244565498
AHVRMLRVLH	10	Unmodified	_AHVRMLRVLH_					0	0	0		ENST00000600274.5_1_19:42396347-42410935:+|nuORF;nc|ENSG00000076928|Q92888-2|ARHGEF1;ENSG00000076928|ENST00000354532|ARHGEF1;nc|ENSG00000076928|Q92888-3|ARHGEF1;nc|ENSG00000076928|Q92888-4|ARHGEF1;ENST00000595897.5_1_19:42402462-42407822:+|nuORF	ENST00000600274.5_1_19:42396347-42410935:+|nuORF	ENST00000600274.5_1_19:42396347-42410935:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	411.24334716796875	3	411.244998	1230.71316	-0.96242	-0.00039579	-1.6739	-0.00068837	-2.6363	-0.0010842	411.5787168011258	103.17	0.55617	103.17	102.87	103.43	0					34	13	3	0	0	0	0.86698	1	10584	10584		28.081	1.3318	1	1384400			741	1369	522	523	951	951					0.10703659875912308
AHWTATDEEES	11	Unmodified	_AHWTATDEEES_					0	0	0			REV__nc|ENSG00000165509|Q8TD91-2|MAGEC3	REV__nc|ENSG00000165509|Q8TD91-2|MAGEC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	638.2605590820312	2	638.259839	1274.50512	0.99539	0.00063532	-0.26767	-0.00017084	0.72772	0.00046447	638.2595210023906	81.641	0.82089	81.699	81.296	82.117	0.057808					46	18	3	0	0	0	0.5603	1	8133	8133		47.657	6.8792	1	589830	+		742	21189	523	524	952	952					-0.12114760088797993
AHYCFSLLKV	10	Unmodified	_AHYCFSLLKV_					0	0	0		ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.813232421875	2	590.812802	1179.61105	-0.47583	-0.00028113	3.0475	0.0018005	2.5717	0.0015194	590.8146636802912	49.04	1.1924	49.035	48.561	49.754	-0.0056419					55	26	3	0	0	0	0.77314	1	4120	4120		40.778	1.5253	1	226240			743	5329	524	525	953	953					0.02842949013620455
AIAAIKPK	8	Unmodified	_AIAAIKPK_					0	0	0			REV__ENSG00000169122|ENST00000519262|FAM110B	REV__ENSG00000169122|ENST00000519262|FAM110B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2487487792969	2	406.273638	810.532724	1.1347	0.00046098	1.3615	0.00055314	2.4961	0.0010141	406.2750322839767	88.513	0.64153	88.439	88.03	88.672	-0.073997					27	15	3	0	0	0	0.4196	1	9214	9214		20.482	11.66	1	374820	+		744	21551	525	526	954	954					0.11987884490690703
AIAAIKPK	8	Unmodified	_AIAAIKPK_					0	0	0			REV__ENSG00000169122|ENST00000519262|FAM110B	REV__ENSG00000169122|ENST00000519262|FAM110B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.273638	810.532724	-1.814	-0.00073698	6.6181	0.0026887	4.8041	0.0019518	406.2765752340401	88.281	0.23557	88.488	88.352	88.588	0.20731	0.06078	6.7952E-05	NaN	20.482	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	263350	+		745	21551	525	526							0.11987884490690703
AIAAIKPK	8	Unmodified	_AIAAIKPK_					0	0	0			REV__ENSG00000169122|ENST00000519262|FAM110B	REV__ENSG00000169122|ENST00000519262|FAM110B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	406.273638	810.532724	-1.9275	-0.00078307	12.63	0.005131	10.702	0.004348	406.2791617015989	88.186	0.24913	88.355	88.126	88.375	0.16923	-0.071993	0.0049526	NaN	20.482	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189720	+		746	21551	525	526							0.11987884490690703
AIAEVLLN	8	Unmodified	_AIAEVLLN_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2;ENST00000461880.5_1_6:31852420-31852859:-|nuORF;ENST00000494816.5_1_6:31847863-31852859:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.751220703125	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.577	1	76.626	76.126	77.126	0.049194								0	0	0	0.29703	1	7401	7401		37.159	3.6435	1				747	8437	526	527	955	955					0.06383284011519663
AIAGFGLLPNQ	11	Unmodified	_AIAGFGLLPNQ_					0	0	0			REV__ENST00000506888.5_1_6:88187111-88216600:+|nuORF	REV__ENST00000506888.5_1_6:88187111-88216600:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8057250976562	2	550.808574	1099.60259	0.24565	0.0001353	-3.6935	-0.0020344	-3.4479	-0.0018991	550.8063464981013	29.888	1.5118	29.799	29.104	30.616	-0.089546					94	34	5	0	0	0	0.40756	1	1911	1911		58.782	4.0056	1	1346500	+		748	21080	527	528	956	956					0.056777183686335775
AIAGIADVI	9	Unmodified	_AIAGIADVI_					0	0	0			REV__ENSG00000083097|ENST00000349129|DOP1A	REV__ENSG00000083097|ENST00000349129|DOP1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.751953125	2	421.752736	841.490919	-1.7818	-0.0007515	-1.2969	-0.00054696	-3.0787	-0.0012985	421.7522177518738	76.828	1.8707	76.953	75.249	77.12	0.12485					132	61	3	0	0	0	0.7932	1	7114	7114		25.45	0	1	487030	+		749	16847	528	529	957	957					0.06383284011508294
AIAKCLALA	9	Unmodified	_AIAKCLALA_					0	0	0			REV__ENST00000598497.1_1_19:58600016-58601841:-|nuORF	REV__ENST00000598497.1_1_19:58600016-58601841:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26593017578125	2	437.264956	872.515359	2.8534	0.0012477	-1.6442	-0.00071895	1.2092	0.00052875	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.7932	1	1442	1442		26.796	0	1	21873000	+		750	29284	529	530	958	958					0.07400220893373444
AIAKGIGRSA	10	Unmodified	_AIAKGIGRSA_					0	0	0			REV__nc|ENSG00000119471|Q6YN16-2|HSDL2	REV__nc|ENSG00000119471|Q6YN16-2|HSDL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28753662109375	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.85251	1	10397	10397		19.997	0.6368	1	50843000	+		751	18354	530	531	959	959					0.0874858239999412
AIAKSVSSRN	10	Unmodified	_AIAKSVSSRN_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7933349609375	2	516.793455	1031.57236	-0.83709	-0.0004326	0.85733	0.00044306	0.020239	1.0459E-05	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.76096	1	8542	8542		41.427	0.85399	1	490270	+		752	24039	531	532	960	960					0.05783359703491442
AIALALREKQR	11	Unmodified	_AIALALREKQR_					0	0	0		ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8927001953125	2	634.893503	1267.77245	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.73	1	107.87	107.37	108.37	0.13866								0	0	0	0.56276	1	11584	11584		28.081	2.5074	1				753	920	532	533	961	961					0.1492783437106482
AIAPKVQAALD	11	Unmodified	_AIAPKVQAALD_					0	0	0		ENSG00000101350|ENST00000375712|KIF3B;nc|ENSG00000101350|O15066-2|KIF3B	ENSG00000101350|ENST00000375712|KIF3B	ENSG00000101350|ENST00000375712|KIF3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.8532104492188	2	548.821681	1095.62881	-1.5791	-0.00086663	-3.9259	-0.0021546	-5.505	-0.0030213	548.8193457369294	40.566	0.26659	41.155	41.013	41.28	0.58915					13	7	2	0	0	0	0.17387	1	3466	3466		23.523	0	1	650670			754	1936	533	534	962	962					0.08481987540130831
AIAQLNGK	8	Unmodified	_AIAQLNGK_					0	0	0		ENSG00000239306|ENST00000310137|RBM14;nc|ENSG00000239306|Q96PK6-2|RBM14	ENSG00000239306|ENST00000310137|RBM14	ENSG00000239306|ENST00000310137|RBM14	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.7407531738281	2	407.742702	813.470852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.531	1	22.596	22.096	23.096	0.064745								0	0	0	0.30784	1	690	690		14.664	0	1				755	8767	534	535	963	963					0.05665533071567097
AICVDGTF	8	Unmodified	_AICVDGTF_					0	0	0		ENSG00000196998|ENST00000376372|WDR45;nc|ENSG00000196998|Q9Y484-3|WDR45;nc|ENSG00000196998|Q9Y484-2|WDR45	ENSG00000196998|ENST00000376372|WDR45	ENSG00000196998|ENST00000376372|WDR45	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.18280029296875	2	413.194196	824.37384	0.013412	5.5416E-06	-1.6408	-0.00067795	-1.6273	-0.00067241	413.1934265117742	81.09	1.7847	81.589	80.753	82.537	0.49966					82	43	2	0	0	0	0.4196	1	9481	9481		20.482	0	1	737990			756	8121	535	536	964	964					-0.04537197199726961
AIDEMLKLGNH	11	Unmodified	_AIDEMLKLGNH_					0	0	0		ENST00000544702.5_1_12:7248989-7252531:-|nuORF;ENSG00000139178|ENST00000266542|C1RL	ENST00000544702.5_1_12:7248989-7252531:-|nuORF	ENST00000544702.5_1_12:7248989-7252531:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	620.822265625	2	620.821355	1239.62816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.81	1	119.72	119.22	120.22	-0.088509								0	0	0	0.56276	1	12946	12946		13.454	2.5885	1				757	4351	536	537	965	965					0.017928248287716997
AIEDIITVL	9	Unmodified	_AIEDIITVL_					0	0	0		nc|ENSG00000157827|Q96PY5|FMNL2	nc|ENSG00000157827|Q96PY5|FMNL2	nc|ENSG00000157827|Q96PY5|FMNL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.79180908203125	2	493.792058	985.569563	-1.0082	-0.00049786	0.99365	0.00049066	-0.014583	-7.2009E-06	493.79239689427686	91.796	2.3688	92.259	91.807	94.176	0.46249					119	55	4	0	0	0	0.43338	1	10924	10924		55.504	0	1	3049900			758	15024	537	538	966	966					0.07620091525939188
AIELTRKLY	9	Unmodified	_AIELTRKLY_					0	0	0		ENSG00000162779|ENST00000367618|AXDND1	ENSG00000162779|ENST00000367618|AXDND1	ENSG00000162779|ENST00000367618|AXDND1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8299560546875	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.78536	1	10607	10607		29.15	4.6304	1	5381700			759	5737	538	539	967	967					0.10094577919812764
AIETCECGVY	10	Unmodified	_AIETCECGVY_					0	0	0		nc|ENSG00000133135|Q8TEB7-2|RNF128	nc|ENSG00000133135|Q8TEB7-2|RNF128	nc|ENSG00000133135|Q8TEB7-2|RNF128	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2279663085938	2	544.225368	1086.43618	-0.48825	-0.00026572	-2.0425	-0.0011116	-2.5307	-0.0013773	544.2233569157023	55.905	0.24408	56.306	56.115	56.359	0.40102					9	5	2	0	0	0	0.37624	1	5743	5743		37.159	8.0096	1	190760			760	14927	539	540	968	968					-0.10357838913705564
AIFAQRIL	8	Unmodified	_AIFAQRIL_					0	0	0		ENSG00000205922|ENST00000382349|ONECUT3	ENSG00000205922|ENST00000382349|ONECUT3	ENSG00000205922|ENST00000382349|ONECUT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.2893371582031	2	466.28982	930.565087	0.52735	0.0002459	-0.45222	-0.00021086	0.075133	3.5034E-05	466.28951494352106	73.831	0.94804	73.962	73.721	74.669	0.13127					82	37	3	0	0	0	0.88915	1	6844	6844		35.201	5.3592	1	894650			761	8548	540	541	969	969					0.09702671893705883
AIFICNYAP	9	Unmodified	_AIFICNYAP_					0	0	0		nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2;nc|ENSG00000180481|Q4G1C9-6|GLIPR1L2;ENSG00000180481|ENST00000550916|GLIPR1L2;nc|ENSG00000180481|Q4G1C9-2|GLIPR1L2	nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2	nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.2530822753906	2	506.252046	1010.48954	-1.6382	-0.00082933	4.0021	0.0020261	2.3639	0.0011967	506.25395587471024	37.705	1.0151	37.705	37.395	38.41	0					69	24	5	0	0	0	0.62081	1	2302	2302		45.952	1.8352	1	1276600			762	7331	541	542	970	970					-0.015286733488892423
AIFVILKAF	9	Unmodified	_AIFVILKAF_					0	0	0			REV__ENSG00000114374|ENST00000338981|USP9Y;REV__nc|ENSG00000124486|Q93008-3|USP9X	REV__ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.3279113769531	2	511.325871	1020.63719	0.7825	0.00040011	1.6612	0.00084941	2.4437	0.0012495	511.32659948169965	97.129	2.2022	97.292	96.878	99.081	0.16316					131	50	4	0	0	0	0.7932	1	10102	10102		12.207	2.7363	1	1350400	+		763	18042;18587	542	543	971	971					0.12769586247429743
AIFVLLPLWCV	11	Unmodified	_AIFVLLPLWCV_					0	0	0			REV__ENSG00000006638|ENST00000375190|TBXA2R	REV__ENSG00000006638|ENST00000375190|TBXA2R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	637.3690795898438	2	637.372495	1272.73044	-1.1676	-0.00074419	-1.8725	-0.0011934	-3.04	-0.0019376	637.3712208846088	105.62	2.2472	105.69	104.93	107.17	0.07312					175	54	4	0	0	0	0.74035	1	11172	11172		24.203	8.8696	1	2485300	+		764	16107	543	544	972	972					0.10498142638357422
AIFYEWRKIHR	11	Unmodified	_AIFYEWRKIHR_					0	0	0			REV__CON__Q28107	REV__CON__Q28107	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	507.28875732421875	3	506.949127	1517.82555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.827	1	39.779	39.279	40.279	-0.04789								0	0	0	0.56276	1	2472	2472		12.957	0	1		+	+	765	16002	544	545	973	973					0.0873521215371511
AIGRKETR	8	Unmodified	_AIGRKETR_					0	0	0			REV__ENST00000419507.1_1_20:37958297-37958411:-|nuORF	REV__ENST00000419507.1_1_20:37958297-37958411:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7770080566406	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.5	1	80.5	80	81	0								0	0	0	0.29508	1	7431	7431		26.693	3.6504	1		+		766	26475	545	546	974	974					0.07307411740180214
AIGRQLPK	8	Unmodified	_AIGRQLPK_					0	0	0			REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7879943847656	2	441.779619	881.544686	-0.28507	-0.00012594	-1.2586	-0.00055603	-1.5437	-0.00068197	441.77878573830174	38.369	0.16205	38.891	38.79	38.952	0.52235					5	3	2	0	0	0	0.4196	1	3163	3163		7.1934	0	1	53998	+		767	23119	546	547	975	975					0.09917501233883286
AIGRRLLQ	8	Unmodified	_AIGRRLLQ_					0	0	0		ENST00000263093.6_2_19:59010515-59011725:-|nuORF	ENST00000263093.6_2_19:59010515-59011725:-|nuORF	ENST00000263093.6_2_19:59010515-59011725:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.7992248535156	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.86288	1	3272	3272		26.796	1.3459	1	1570500			768	9454	547	548	976	976					0.11636592499519338
AIGVLAPAH	9	Unmodified	_AIGVLAPAH_					0	0	0		ENSG00000203727|ENST00000367474|SAMD5	ENSG00000203727|ENST00000367474|SAMD5	ENSG00000203727|ENST00000367474|SAMD5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.3057861328125	2	424.75307	847.491587	-1.8152	-0.00077102	-3.8125	-0.0016194	-5.6278	-0.0023904	424.7527122644372	38.348	0.19125	38.364	38.269	38.46	0.016563					6	4	2	0	0	0	0.20789	1	2261	2261		14.664	5.8418	1	19552			769	8391	548	549	977	977					0.06174123451228297
AIGVLAPAH	9	Unmodified	_AIGVLAPAH_					0	0	0		ENSG00000203727|ENST00000367474|SAMD5	ENSG00000203727|ENST00000367474|SAMD5	ENSG00000203727|ENST00000367474|SAMD5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.3054504394531	2	424.75307	847.491587	0.86681	0.00036818	3.5705	0.0015166	4.4373	0.0018848	424.75477802220314	34.373	0.53563	34.583	34.319	34.854	0.21003					16	12	2	0	0	0	0.20789	1	2578	2578		21.702	12.88	1	97791			770	8391	548	549	978	978					0.06174123451228297
AIGVLAPAH	9	Unmodified	_AIGVLAPAH_					0	0	0		ENSG00000203727|ENST00000367474|SAMD5	ENSG00000203727|ENST00000367474|SAMD5	ENSG00000203727|ENST00000367474|SAMD5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	424.75307	847.491587	-0.12584	-5.3449E-05	6.0902	0.0025868	5.9644	0.0025334	424.75546865041997	34.548	0.5977	34.543	34.217	34.814	-0.0047417	0.0084854	0.00025434	NaN	21.702	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52342			771	8391	548	549							0.06174123451228297
AIGVLAPAH	9	Unmodified	_AIGVLAPAH_					0	0	0		ENSG00000203727|ENST00000367474|SAMD5	ENSG00000203727|ENST00000367474|SAMD5	ENSG00000203727|ENST00000367474|SAMD5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	424.75307	847.491587	-0.63122	-0.00026811	6.6143	0.0028094	5.9831	0.0025413	424.7557331414926	34.594	0.63694	34.538	34.216	34.853	-0.056381	0.002636	0.00069957	NaN	21.702	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56215			772	8391	548	549							0.06174123451228297
AIGVLAPAH	9	Unmodified	_AIGVLAPAH_					0	0	0		ENSG00000203727|ENST00000367474|SAMD5	ENSG00000203727|ENST00000367474|SAMD5	ENSG00000203727|ENST00000367474|SAMD5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	424.75307	847.491587	1.3093	0.00055613	4.7586	0.0020212	6.0679	0.0025774	424.7548365752414	34.471	0.52644	34.476	34.199	34.725	0.0045662	-0.059221	-0.00087686	NaN	21.702	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48797			773	8391	548	549							0.06174123451228297
AIHIVQRNT	9	Unmodified	_AIHIVQRNT_					0	0	0			REV__ENSG00000198633|ENST00000433050|ZNF534	REV__ENSG00000198633|ENST00000433050|ZNF534	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	525.880859375	2	526.30399	1050.59343	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.263	1	72.343	71.843	72.843	0.080032								0	0	0	0.32469	1	6588	6588		21.96	0	1		+		774	23348	549	550	979	979					0.07015369802979876
AIHSPHIP	8	Unmodified	_AIHSPHIP_					0	0	0			REV__ENSG00000158258|ENST00000458420|CLSTN2	REV__ENSG00000158258|ENST00000458420|CLSTN2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7732238769531	2	436.24287	870.471186	0.38306	0.00016711	2.24	0.00097717	2.623	0.0011443	436.24350489350246	27.51	0.16799	27.551	27.419	27.587	0.040834					7	4	2	0	0	0	0.4196	1	1243	1243		15.636	6.8139	1	13510	+		775	20598	550	551	980	980					0.03076952791423082
AIIEIQLEPL	10	Unmodified	_AIIEIQLEPL_					0	0	0			REV__ENSG00000132763|ENST00000401061|MMACHC	REV__ENSG00000132763|ENST00000401061|MMACHC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8256225585938	2	569.839539	1137.66453	-0.9021	-0.00051405	0.56832	0.00032385	-0.33379	-0.0001902	570.3423556626024	59.363	0.19937	59.754	59.609	59.808	0.39077					6	4	2	0	0	0	0.37624	1	6235	6235		37.812	4.9991	1	115890	+		776	19028	551	552	981	981					0.10120024997149812
AIIELQLL	8	Unmodified	_AIIELQLL_					0	0	0		ENSG00000198198|ENST00000634258|SZT2;nc|ENSG00000198198|Q5T011-5|SZT2	ENSG00000198198|ENST00000634258|SZT2	ENSG00000198198|ENST00000634258|SZT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.79132080078125	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.87922	1	2993	2993		31.955	6.5047	1	759950			777	8253	552	553	982	982					0.10984716596760791
AIIFILSG	8	Unmodified	_AIIFILSG_					0	0	0		ENSG00000129667|ENST00000675367|RHBDF2;nc|ENSG00000129667|Q6PJF5|RHBDF2;ENST00000590168.5_1_17:74467717-74469013:-|nuORF	ENSG00000129667|ENST00000675367|RHBDF2	ENSG00000129667|ENST00000675367|RHBDF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.25860595703125	2	417.260197	832.50584	-0.38397	-0.00016022	-3.5679	-0.0014888	-3.9519	-0.001649	417.2585749889359	22.175	2.752	22.117	21.499	24.251	-0.05867					139	87	2	0	0	0	0.81548	1	709	709		20.482	1.1219	1	87379			778	3600	553	554	983	983					0.08288775879532295
AIIIGVRK	8	Unmodified	_AIIIGVRK_					0	0	0		ENSG00000249853|ENST00000312719|HS3ST5	ENSG00000249853|ENST00000312719|HS3ST5	ENSG00000249853|ENST00000312719|HS3ST5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3003234863281	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.86294	1	8040	8040		8.8223	0.59103	1	5485100			779	8840	554	555	984	984					0.14627262273359065
AIIIGVRK	8	Unmodified	_AIIIGVRK_					0	0	0		ENSG00000249853|ENST00000312719|HS3ST5	ENSG00000249853|ENST00000312719|HS3ST5	ENSG00000249853|ENST00000312719|HS3ST5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30023193359375	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.80963	4	7933	7619;7738;7933;8366		15.636	1.8609	1	6323600			780	8840	554	555	985;986;987;988	987					0.14627262273359065
AIIKFWPTIK	10	Unmodified	_AIIKFWPTIK_					0	0	0			REV__nc|ENSG00000067064|Q13907|IDI1	REV__nc|ENSG00000067064|Q13907|IDI1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.8789367675781	3	406.253265	1215.73797	1.6868	0.00068527	0.90599	0.00036806	2.5928	0.0010533	406.25347238550796	18.905	0.29073	18.428	18.311	18.602	-0.47694					12	6	2	0	0	0	0.37624	1	463	463		25.126	16.327	1	43494	+		781	16534	555	556	989	989					0.13872618230266198
AIIKFWPTIK	10	Unmodified	_AIIKFWPTIK_					0	0	0			REV__nc|ENSG00000067064|Q13907|IDI1	REV__nc|ENSG00000067064|Q13907|IDI1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	406.253265	1215.73797	0.025903	1.0523E-05	2.6516	0.0010772	2.6775	0.0010877	406.2542676767144	19.097	0.26213	18.467	18.358	18.62	-0.6296	0.019436	0.00070018	NaN	19.263	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55903	+		782	16534	555	556							0.13872618230266198
AIILLMLEKVH	11	Unmodified	_AIILLMLEKVH_					0	0	0			REV__nc|ENSG00000272987|P0C617|OR5AL1	REV__nc|ENSG00000272987|P0C617|OR5AL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3932495117188	2	640.393959	1278.77336	0.18689	0.00011969	-1.9115	-0.0012241	-1.7246	-0.0011044	640.3926444536196	51.078	1.0383	51.513	50.994	52.033	0.43505					62	24	3	0	0	0	0.76699	1	5066	5066		18.262	0	1	1259400	+		783	30263	556	557	990	990					0.14512912695749947
AIIRLNKLIHK	11	Unmodified	_AIIRLNKLIHK_					0	0	0			REV__nc|nan|Q8N4C9-2|C17orf78	REV__nc|nan|Q8N4C9-2|C17orf78	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.2551574707031	3	440.294235	1317.86087	-1.5889	-0.00069959	-2.3802	-0.001048	-3.9691	-0.0017476	440.2929114415383	60.129	1.2321	60.129	59.57	60.802	0					118	47	4	0	0	0	0.17606	1	5314	5314		25.126	14.539	1	142860	+		784	24036	557	558	991	991					0.21465874681553032
AIISKAKNL	9	Unmodified	_AIISKAKNL_					0	0	0		nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30572509765625	2	479.30821	956.601866	0.045745	2.1926E-05	-0.88267	-0.00042307	-0.83693	-0.00040115	479.3077911599006	39.313	1.5379	39.26	38.607	40.145	-0.052727					56	42	2	0	0	0	0.7932	1	2484	2484		21.96	1.013	1	126750			785	7298	558	559	992	992					0.12182923719592509
AIKASRHS	8	Unmodified	_AIKASRHS_					0	0	0		nc|ENSG00000035928|P35251|RFC1;ENSG00000035928|ENST00000349703|RFC1	nc|ENSG00000035928|P35251|RFC1	nc|ENSG00000035928|P35251|RFC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25164794921875	2	435.251226	868.487899	-0.21094	-9.1811E-05	0.46031	0.00020035	0.24937	0.00010854	435.2513273926442	92.773	0.95985	93.223	92.818	93.778	0.44989					52	22	3	0	0	0	0.87792	1	11095	11095		31.53	2.3803	1	401060			786	900	559	560	993	993					0.04839453677379879
AIKKKEQRVQH	11	Unmodified	_AIKKKEQRVQH_					0	0	0		ENSG00000178395|ENST00000366875|CCDC185	ENSG00000178395|ENST00000366875|CCDC185	ENSG00000178395|ENST00000366875|CCDC185	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6067199707031	3	455.608882	1363.80482	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.613	1	67.671	67.171	68.171	0.057617								0	0	0	0.56276	1	6032	6032		25.068	6.5367	1				787	7204	560	561	994	994					0.13746621774089363
AIKKKYQL	8	Unmodified	_AIKKKYQL_					0	0	0			REV__ENST00000482800.5_1_3:57261911-57301862:+|nuORF	REV__ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.8240051269531	2	496.318577	990.622602	-0.26266	-0.00013036	0.28862	0.00014325	0.025961	1.2885E-05	496.31871000594134	19.705	0.46872	19.631	19.507	19.975	-0.073704					18	14	2	0	0	0	0.88915	1	457	457		35.201	0	1	25212	+		788	20546	561	562	995	995					0.12691514099276446
AIKKPLTQK	9	Unmodified	_AIKKPLTQK_					0	0	0		nc|ENSG00000108604|Q92925-3|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;ENSG00000108604|ENST00000448276|SMARCD2	nc|ENSG00000108604|Q92925-3|SMARCD2	nc|ENSG00000108604|Q92925-3|SMARCD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.8372192382812	2	513.837134	1025.65972	0.87167	0.0004479	-0.67969	-0.00034925	0.19199	9.865E-05	513.8364877044384	18.225	0.60526	17.748	17.471	18.077	-0.47694					17	12	3	0	0	0	0.28163	1	361	361		66.429	10.925	1	173310			789	2421	562	563	996	996					0.14791185645026417
AIKKPLTQK	9	Unmodified	_AIKKPLTQK_					0	0	0		nc|ENSG00000108604|Q92925-3|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;ENSG00000108604|ENST00000448276|SMARCD2	nc|ENSG00000108604|Q92925-3|SMARCD2	nc|ENSG00000108604|Q92925-3|SMARCD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8369750976562	2	513.837134	1025.65972	0.47922	0.00024624	0.023483	1.2066E-05	0.5027	0.00025831	513.8367412328821	18.388	0.31948	17.766	17.585	17.905	-0.62141					14	6	3	0	0	0	0.44421	1	387	387		54.776	10.66	1	148540			790	2421	562	563	997	997					0.14791185645026417
AIKRVMPPA	9	Unmodified	_AIKRVMPPA_					0	0	0			REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF	REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79608154296875	2	491.796955	981.579357	-1.7512	-0.00086123	-0.84159	-0.00041389	-2.5928	-0.0012751	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.7932	1	3695	3695		25.45	1.2474	1	2627300	+		791	17656	563	564	998	998					0.08783001050346684
AIKSKVAP	8	Unmodified	_AIKSKVAP_					0	0	0		nc|ENSG00000123191|P35670-3|ATP7B;nc|ENSG00000123191|P35670-4|ATP7B;ENSG00000123191|ENST00000242839|ATP7B;nc|ENSG00000123191|P35670-2|ATP7B;nc|ENSG00000123191|P35670-5|ATP7B	nc|ENSG00000123191|P35670-3|ATP7B	nc|ENSG00000123191|P35670-3|ATP7B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.2674560546875	2	407.263271	812.511988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.917	1	33.913	33.413	34.413	-0.0047417								0	0	0	0.29755	1	2004	2004		24.203	1.1603	1				792	3264	564	565	999	999					0.09823294111038194
AIKSQSAVTKT	11	Unmodified	_AIKSQSAVTKT_					0	0	0		ENSG00000156920|ENST00000394143|ADGRG4;nc|ENSG00000156920|Q8IZF6-2|ADGRG4;nc|ENSG00000156920|Q8IZF6-3|ADGRG4	ENSG00000156920|ENST00000394143|ADGRG4	ENSG00000156920|ENST00000394143|ADGRG4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3280639648438	2	567.32987	1132.64519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.04	1	116.1	115.6	116.6	0.05954								0	0	0	0.56276	1	12338	12338		31.634	7.4315	1				793	5401	565	566	1000	1000					0.08417068706239661
AILALPPTEG	10	Unmodified	_AILALPPTEG_					0	0	0		nc|ENSG00000138316|Q8WXS8-2|ADAMTS14;nc|ENSG00000138316|Q8WXS8-3|ADAMTS14;ENSG00000138316|ENST00000373207|ADAMTS14;nc|ENSG00000138316|Q8WXS8-4|ADAMTS14	nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2824401855469	2	491.2844	980.554247	-0.025221	-1.2391E-05	-3.0621	-0.0015044	-3.0874	-0.0015168	491.28270988248187	19.374	0.95016	18.745	18.401	19.351	-0.62961					30	20	2	0	0	0	0.84112	1	522	522		37.159	6.6555	1	86400			794	4286	566	567	1001	1001					0.06319224728747486
AILALPPTEG	10	Unmodified	_AILALPPTEG_					0	0	0		nc|ENSG00000138316|Q8WXS8-2|ADAMTS14;nc|ENSG00000138316|Q8WXS8-3|ADAMTS14;ENSG00000138316|ENST00000373207|ADAMTS14;nc|ENSG00000138316|Q8WXS8-4|ADAMTS14	nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	491.2844	980.554247	0.25735	0.00012643	-2.8471	-0.0013987	-2.5898	-0.0012723	491.2825977182017	19.069	0.93764	18.594	18.313	19.251	-0.4748	-0.075236	0.000156	NaN	37.159	28	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82690			795	4286	566	567							0.06319224728747486
AILDDLLPL	9	Unmodified	_AILDDLLPL_					0	0	0		ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	ENSG00000001626|ENST00000003084|CFTR	ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79534912109375	2	491.794601	981.574648	-1.4864	-0.00073099	4.0311	0.0019825	2.5447	0.0012515	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.7932	1	4493	4493		18.324	0.95945	1	781720			796	650	567	568	1002	1002					0.08312395388577443
AILDDLLPL	9	Unmodified	_AILDDLLPL_					0	0	0		ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	ENSG00000001626|ENST00000003084|CFTR	ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958068847656	2	491.794601	981.574648	-1.4502	-0.0007132	3.9522	0.0019437	2.502	0.0012305	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.7932	1	4740	4740		18.324	0	1	1043600			797	650	567	568	1003	1003					0.08312395388577443
AILDDLLPL	9	Unmodified	_AILDDLLPL_					0	0	0		ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	ENSG00000001626|ENST00000003084|CFTR	ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79583740234375	2	491.794601	981.574648	0.019467	9.5736E-06	2.4962	0.0012276	2.5157	0.0012372	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.7932	1	4348	4348		25.45	2.4077	1	310050			798	650	567	568	1004	1004					0.08312395388577443
AILDDLLPL	9	Unmodified	_AILDDLLPL_					0	0	0		ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	ENSG00000001626|ENST00000003084|CFTR	ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7961730957031	2	491.794601	981.574648	-0.91317	-0.00044909	3.0617	0.0015057	2.1485	0.0010566	491.79595933805444	45.694	2.2667	46.589	46.327	48.594	0.89542					151	55	4	0	0	0	0.7932	1	4281	4281		24.203	3.7209	1	3110500			799	650	567	568	1005	1005					0.08312395388577443
AILFKRSQGEF	11	Unmodified	_AILFKRSQGEF_					0	0	0			REV__nc|ENSG00000173826|Q9H252-3|KCNH6	REV__nc|ENSG00000173826|Q9H252-3|KCNH6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3916015625	2	648.358962	1294.70337	0.94494	0.00061266	2.8543	0.0018506	3.7992	0.0024633	648.3606641618649	105.59	0.80506	105.7	105.23	106.04	0.10766					39	20	3	0	0	0	0.1745	1	11311	11311		19.997	0	1	141380	+		800	21955	568	569	1006	1006					0.06780750351504139
AILFKRSQGEF	11	Unmodified	_AILFKRSQGEF_					0	0	0			REV__nc|ENSG00000173826|Q9H252-3|KCNH6	REV__nc|ENSG00000173826|Q9H252-3|KCNH6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	648.358962	1294.70337	1.604	0.00104	1.8895	0.001225	3.4935	0.002265	648.3601027390995	105.54	0.83541	105.7	105.13	105.96	0.15924	0.0098795	-0.0016429	NaN	19.997	39	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123540	+		801	21955	568	569							0.06780750351504139
AILFKRSQGEF	11	Unmodified	_AILFKRSQGEF_					0	0	0			REV__nc|ENSG00000173826|Q9H252-3|KCNH6	REV__nc|ENSG00000173826|Q9H252-3|KCNH6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	648.358962	1294.70337	-1.1409	-0.00073972	5.0255	0.0032583	3.8846	0.0025186	648.3622294104981	105.6	0.86369	105.67	105.14	106	0.073112	-0.01705	0.0024237	NaN	19.997	38	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176360	+		802	21955	568	569							0.06780750351504139
AILGVWSH	8	Unmodified	_AILGVWSH_					0	0	0			REV__nc|ENSG00000071967|Q53TN4-3|CYBRD1	REV__nc|ENSG00000071967|Q53TN4-3|CYBRD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879943847656	2	441.745245	881.475937	-0.47989	-0.00021199	3.2348	0.001429	2.7549	0.001217	441.7484770204756	38.986	0.70905	38.997	38.806	39.515	0.011173					26	16	2	0	0	0	0.4196	1	2765	2765		12.959	0	1	42933	+		803	16632	569	570	1007	1007					0.030458369341886282
AILIGSPVL	9	Unmodified	_AILIGSPVL_					0	0	0			REV__nc|ENSG00000186090|Q70Z44|HTR3D	REV__nc|ENSG00000186090|Q70Z44|HTR3D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7874450683594	2	441.786579	881.558604	-1.4973	-0.00066148	4.3629	0.0019275	2.8656	0.001266	441.788391738542	44.7	2.6432	44.712	43.395	46.038	0.012058					134	65	3	0	0	0	0.76996	1	3241	3241		33.516	6.7195	1	555340	+		804	30105	570	571	1008	1008					0.11308733942325944
AILIGSPVL	9	Unmodified	_AILIGSPVL_					0	0	0			REV__nc|ENSG00000186090|Q70Z44|HTR3D	REV__nc|ENSG00000186090|Q70Z44|HTR3D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7865905761719	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.76996	1	2885	2885		33.516	6.7195	1	9571700	+		805	30105	570	571	1009	1009					0.11308733942325944
AILIIKKLHL	10	Unmodified	_AILIIKKLHL_					0	0	0			REV__ENST00000545721.1_1_11:71719136-71719322:-|nuORF	REV__ENST00000545721.1_1_11:71719136-71719322:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	581.4014282226562	2	581.407727	1160.8009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.91	1	108.91	108.41	109.41	0								0	0	0	0.45132	1	11330	11330		12.207	0.69583	1		+		806	28530	571	572	1010	1010					0.2269318401831697
AILIIKKLHL	10	Unmodified	_AILIIKKLHL_					0	0	0			REV__ENST00000545721.1_1_11:71719136-71719322:-|nuORF	REV__ENST00000545721.1_1_11:71719136-71719322:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.4046630859375	2	581.407727	1160.8009	0.27248	0.00015842	-3.6485	-0.0021212	-3.376	-0.0019628	581.40539803952	108.96	0.64938	108.99	108.59	109.24	0.034355					68	31	3	0	0	0	0.88106	1	11980	11980		12.207	4.5166	1	3975600	+		807	28530	571	572	1011	1011					0.2269318401831697
AILIIKKLHL	10	Unmodified	_AILIIKKLHL_					0	0	0			REV__ENST00000545721.1_1_11:71719136-71719322:-|nuORF	REV__ENST00000545721.1_1_11:71719136-71719322:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	581.40234375	2	581.407727	1160.8009	-1.3499	-0.00078484	-2.0358	-0.0011836	-3.3857	-0.0019685	581.4064330770331	108.95	0.5045	108.97	108.69	109.19	0.020561					51	25	3	0	0	0	0.91289	1	11643	11643		7.1934	3.2081	1	1616400	+		808	28530	571	572	1012	1012					0.2269318401831697
AILIRVKG	8	Unmodified	_AILIRVKG_					0	0	0			REV__ENSG00000080007|ENST00000370336|DDX43	REV__ENSG00000080007|ENST00000370336|DDX43	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3003234863281	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.81548	2	7644	7644;7685		20.482	4.953	1	5485100	+		809	16795	572	573	1013;1014	1013					0.14627262273370434
AILKNELVLDN	11	Unmodified	_AILKNELVLDN_					0	0	0			REV__ENSG00000165030|ENST00000297689|NFIL3	REV__ENSG00000165030|ENST00000297689|NFIL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.57666015625	3	414.574844	1240.7027	-0.11717	-4.8575E-05	4.4056	0.0018264	4.2884	0.0017779	414.5766103778177	67.467	0.8855	68.015	67.648	68.534	0.54819					37	20	2	0	0	0	0.6493	1	7433	7433		38.754	3.5754	1	248420	+		810	21141	573	574	1015	1015					0.09197910911802865
AILLGLISLAT	11	Unmodified	_AILLGLISLAT_					0	0	0		nc|ENSG00000128815|Q6ZS81-5|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;ENSG00000128815|ENST00000325239|WDFY4	nc|ENSG00000128815|Q6ZS81-5|WDFY4	nc|ENSG00000128815|Q6ZS81-5|WDFY4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	542.8451538085938	2	542.85245	1083.69035	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.93	1	115.99	115.49	116.49	0.05954								0	0	0	0.56276	1	12330	12330		14.137	1.1779	1				811	3561	574	575	1016	1016					0.1518491923941383
AILLLQATPH	10	Unmodified	_AILLLQATPH_					0	0	0			REV__nc|ENSG00000110497|Q9C0C7-4|AMBRA1	REV__nc|ENSG00000110497|Q9C0C7-4|AMBRA1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.82861328125	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.02	1	114.99	114.49	115.49	-0.02433								0	0	0	0.45132	1	12745	12745		23.042	0.46283	1		+		812	17819	575	576	1017	1017					0.1041859526535518
AILPYYVTIFL	11	Unmodified	_AILPYYVTIFL_					0	0	0		ENSG00000158445|ENST00000371741|KCNB1;ENSG00000182674|ENST00000523207|KCNB2	ENSG00000158445|ENST00000371741|KCNB1	ENSG00000158445|ENST00000371741|KCNB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2567443847656	3	438.256564	1311.74786	1.3695	0.00060021	1.1402	0.00049972	2.5098	0.0010999	438.25703315598963	31.177	0.62991	31.167	30.842	31.472	-0.010656					32	14	3	0	0	0	0.73621	1	1688	1688		25.126	0.89417	1	49445			813	5477	576	577	1018	1018					0.10445761444998425
AILSHAAR	8	Unmodified	_AILSHAAR_					0	0	0		nc|ENSG00000100239|O75170-2|PPP6R2;nc|ENSG00000100239|O75170-6|PPP6R2;nc|ENSG00000100239|O75170-4|PPP6R2;nc|ENSG00000100239|O75170-3|PPP6R2;ENSG00000100239|ENST00000612753|PPP6R2;nc|ENSG00000100239|O75170|PPP6R2	nc|ENSG00000100239|O75170-2|PPP6R2	nc|ENSG00000100239|O75170-2|PPP6R2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7750549316406	2	419.748319	837.482085	-1.4957	-0.00062782	-0.17416	-7.3103E-05	-1.6699	-0.00070092	419.7486389326117	41.258	0.42895	41.892	41.743	42.172	0.6339					17	11	2	0	0	0	0.4196	1	3643	3643		31.955	8.9124	1	874010			814	14811	577	578	1019	1019					0.05684355165692523
AILSKFLYY	9	Unmodified	_AILSKFLYY_					0	0	0		nc|ENSG00000107938|Q3B7T1-5|EDRF1;ENSG00000107938|ENST00000356792|EDRF1;nc|ENSG00000107938|Q3B7T1-3|EDRF1;ENST00000525091.5_1_10:127408310-127436620:+|nuORF;nc|ENSG00000107938|Q3B7T1-4|EDRF1	nc|ENSG00000107938|Q3B7T1-5|EDRF1	nc|ENSG00000107938|Q3B7T1-5|EDRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.3181762695312	2	559.318243	1116.62193	0.73243	0.00040966	-0.91281	-0.00051055	-0.18038	-0.00010089	559.317607528246	76.255	0.6572	76.654	76.367	77.025	0.39969					35	15	3	0	0	0	0.07589	2	8650	8650;8662		98.629	32.2	1	472350			815	2381	578	579	1020;1021	1020					0.06828674659550416
AILSKFLYY	9	Unmodified	_AILSKFLYY_					0	0	0		nc|ENSG00000107938|Q3B7T1-5|EDRF1;ENSG00000107938|ENST00000356792|EDRF1;nc|ENSG00000107938|Q3B7T1-3|EDRF1;ENST00000525091.5_1_10:127408310-127436620:+|nuORF;nc|ENSG00000107938|Q3B7T1-4|EDRF1	nc|ENSG00000107938|Q3B7T1-5|EDRF1	nc|ENSG00000107938|Q3B7T1-5|EDRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.3179321289062	2	559.318243	1116.62193	-0.032125	-1.7968E-05	-0.36276	-0.0002029	-0.39488	-0.00022086	559.3179163786697	76.081	0.64577	76.649	76.392	77.038	0.56835					36	15	3	0	0	0	0.19818	3	8682	8657;8669;8682		74.255	26.907	1	834370			816	2381	578	579	1022;1023;1024	1024					0.06828674659550416
AILTDISKRSI	11	Unmodified	_AILTDISKRSI_					0	0	0		ENSG00000147570|ENST00000276570|DNAJC5B	ENSG00000147570|ENST00000276570|DNAJC5B	ENSG00000147570|ENST00000276570|DNAJC5B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2486267089844	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.98	1	115.96	115.46	116.46	-0.02433								0	0	0	0.56276	1	12834	12834		15.921	0.58754	1				817	4910	579	580	1025	1025					0.11945617148717247
AILTILLLAR	10	Unmodified	_AILTILLLAR_					0	0	0			REV__ENSG00000189051|ENST00000399398|RNF222	REV__ENSG00000189051|ENST00000399398|RNF222	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.3739624023438	2	548.876259	1095.73797	0.35659	0.00019572	-0.8026	-0.00044053	-0.44602	-0.00024481	548.8757504810179	37.064	1.4724	37.003	36.198	37.671	-0.060337					73	43	2	0	0	0	0.37624	1	2142	2142		22.58	4.3176	1	160690	+		818	23060	580	581	1026	1026					0.19392618230290282
AILVFIDLMCL	11	Unmodified	_AILVFIDLMCL_					0	0	0			REV__ENSG00000184156|ENST00000388996|KCNQ3	REV__ENSG00000184156|ENST00000388996|KCNQ3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.5667419433594	3	417.567756	1249.68144	1.0829	0.00045217	-3.6699	-0.0015324	-2.5871	-0.0010803	417.56618935661135	36.21	0.97444	36.492	36.077	37.052	0.28173					69	23	4	0	0	0	0.6493	1	2853	2853		38.754	2.436	1	3475800	+		819	22647	581	582	1027	1027					0.06658486287074084
AILVHRLWSF	10	Unmodified	_AILVHRLWSF_					0	0	0			REV__ENSG00000188338|ENST00000614032|SLC38A3	REV__ENSG00000188338|ENST00000614032|SLC38A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.575927734375	3	414.576631	1240.70806	-0.11717	-4.8575E-05	0.095798	3.9716E-05	-0.021369	-8.8589E-06	414.5766103778177	67.467	0.8855	68.015	67.648	68.534	0.54819					37	20	2	0	0	0	0.78666	1	7410	7410		40.058	0	1	248420	+		820	22996	582	583	1028	1028					0.09733679284909158
AILVILGSP	9	Unmodified	_AILVILGSP_					0	0	0		ENST00000267812.3_1_15:44097132-44097216:-|nuORF	ENST00000267812.3_1_15:44097132-44097216:-|nuORF	ENST00000267812.3_1_15:44097132-44097216:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7878112792969	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.76996	1	2686	2686		33.516	0	1	9571700			821	9530	583	584	1029	1029					0.11308733942337312
AILVILGSP	9	Unmodified	_AILVILGSP_					0	0	0		ENST00000267812.3_1_15:44097132-44097216:-|nuORF	ENST00000267812.3_1_15:44097132-44097216:-|nuORF	ENST00000267812.3_1_15:44097132-44097216:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7872009277344	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.72402	1	2876	2876		38.806	5.2906	1	10215000			822	9530	583	584	1030	1030					0.11308733942337312
AILVILGSP	9	Unmodified	_AILVILGSP_					0	0	0		ENST00000267812.3_1_15:44097132-44097216:-|nuORF	ENST00000267812.3_1_15:44097132-44097216:-|nuORF	ENST00000267812.3_1_15:44097132-44097216:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7882385253906	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.76996	1	3079	3079		33.516	6.7195	1	54520000			823	9530	583	584	1031	1031					0.11308733942337312
AILVITDIV	9	Unmodified	_AILVITDIV_					0	0	0			REV__nc|ENSG00000185760|Q9NR82-2|KCNQ5	REV__nc|ENSG00000185760|Q9NR82-2|KCNQ5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8059387207031	2	478.804968	955.595384	-1.2024	-0.0005757	4.0232	0.0019263	2.8208	0.0013506	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.7932	1	2808	2808		24.203	2.2429	1	361300	+		824	15892	584	585	1032	1032					0.11580985768227947
AILVKRLG	8	Unmodified	_AILVKRLG_					0	0	0		ENST00000449762.6_2_8:107758080-107763173:+|nuORF	ENST00000449762.6_2_8:107758080-107763173:+|nuORF	ENST00000449762.6_2_8:107758080-107763173:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.30010986328125	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.86294	1	8136	8136		8.8223	0	1	5485100			825	11880	585	586	1033	1033					0.14627262273370434
AILVPHRNR	9	Unmodified	_AILVPHRNR_					0	0	0		ENSG00000121578|ENST00000393765|B4GALT4;ENST00000460321.5_1_3:118935188-118955715:-|nuORF	ENSG00000121578|ENST00000393765|B4GALT4	ENSG00000121578|ENST00000393765|B4GALT4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3271484375	2	538.327799	1074.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.63	1	103.76	103.26	104.26	0.12622								0	0	0	0.2969	1	10970	10970		31.955	1.4512	1				826	3188	586	587	1034	1034					0.1067106879381754
AILVQRARLAV	11	Unmodified	_AILVQRARLAV_					0	0	0			REV__ENSG00000278540|ENST00000616317|ACACA	REV__ENSG00000278540|ENST00000616317|ACACA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.92950439453125	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.74022	1	3711	3711		24.232	4.2013	1	2526100	+		827	24037	587	588	1035	1035					0.17569039722025082
AILVQRARLAV	11	Unmodified	_AILVQRARLAV_					0	0	0			REV__ENSG00000278540|ENST00000616317|ACACA	REV__ENSG00000278540|ENST00000616317|ACACA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.92974853515625	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.76579	1	4057	4057		18.531	2.6104	1	2612300	+		828	24037	587	588	1036	1036					0.17569039722025082
AILVVFLESA	10	Unmodified	_AILVVFLESA_					0	0	0		ENSG00000158220|ENST00000389567|ESYT3;ENST00000486831.5_1_3:138153640-138188991:+|nuORF;nc|ENSG00000158220|A0FGR9-2|ESYT3	ENSG00000158220|ENST00000389567|ESYT3	ENSG00000158220|ENST00000389567|ESYT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3187866210938	2	531.3157	1060.61685	2.5638	0.0013622	4.2767	0.0022723	6.8404	0.0036344	531.3177191515188	95.1	2.5434	95.042	94.557	97.1	-0.057526					188	59	5	0	0	0	0.86452	1	10208	10208		30.504	1.3541	1	4072600			829	5467	588	589	1037	1037					0.0889637079694694
AILYRTLERR	10	Unmodified	_AILYRTLERR_					0	0	0		nc|ENSG00000129680|Q8IWC1-2|MAP7D3;nc|ENSG00000129680|Q8IWC1-3|MAP7D3;nc|ENSG00000129680|Q8IWC1-4|MAP7D3;ENSG00000129680|ENST00000316077|MAP7D3	nc|ENSG00000129680|Q8IWC1-2|MAP7D3	nc|ENSG00000129680|Q8IWC1-2|MAP7D3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	645.8851318359375	2	645.885678	1289.7568	0.024153	1.56E-05	-3.4633	-0.0022369	-3.4391	-0.0022213	645.8835446839796	105.96	2.0275	105.96	105.37	107.4	0					122	46	3	0	0	0	0.86348	1	10955	10955		31.53	1.2121	1	1316900			830	3602	589	590	1038	1038					0.12351547854018463
AILYRTLERR	10	Unmodified	_AILYRTLERR_					0	0	0		nc|ENSG00000129680|Q8IWC1-2|MAP7D3;nc|ENSG00000129680|Q8IWC1-3|MAP7D3;nc|ENSG00000129680|Q8IWC1-4|MAP7D3;ENSG00000129680|ENST00000316077|MAP7D3	nc|ENSG00000129680|Q8IWC1-2|MAP7D3	nc|ENSG00000129680|Q8IWC1-2|MAP7D3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	645.8839721679688	2	645.885678	1289.7568	-0.0028617	-1.8483E-06	-3.2149	-0.0020765	-3.2178	-0.0020783	645.8834752431377	105.95	1.6411	105.93	105.23	106.87	-0.025146					92	38	3	0	0	0	0.86218	2	11484	11484;11495		32.812	4.1133	1	1736300			831	3602	589	590	1039;1040	1039					0.12351547854018463
AIMKLVKTG	9	Unmodified	_AIMKLVKTG_					0	0	0		nc|ENSG00000149212|P58005-4|SESN3	nc|ENSG00000149212|P58005-4|SESN3	nc|ENSG00000149212|P58005-4|SESN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8009033203125	2	480.799163	959.583773	0.73477	0.00035328	2.7032	0.0012997	3.438	0.001653	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.78983	1	9915	9915		27.882	1.0861	1	18148000			832	14987	590	591	1041	1041					0.1023646547325825
AIMKLVKTG	9	Unmodified	_AIMKLVKTG_					0	0	0		nc|ENSG00000149212|P58005-4|SESN3	nc|ENSG00000149212|P58005-4|SESN3	nc|ENSG00000149212|P58005-4|SESN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.8011474609375	2	480.799163	959.583773	1.8222	0.00087609	2.1635	0.0010402	3.9856	0.0019163	480.8000859655465	94.893	2.2797	95.326	94.801	97.081	0.4324					179	54	5	0	0	0	0.78983	2	11436	11424;11436		27.882	3.6795	1	7713500			833	14987	590	591	1042;1043	1043					0.1023646547325825
AIMVSSIVLL	10	Unmodified	_AIMVSSIVLL_					0	0	0		ENSG00000221910|ENST00000408955|OR2F2	ENSG00000221910|ENST00000408955|OR2F2	ENSG00000221910|ENST00000408955|OR2F2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3034057617188	2	523.319928	1044.6253	-1.0324	-0.00054027	-4.3553	-0.0022792	-5.3877	-0.0028195	523.317614513329	88.514	0.83526	88.984	88.32	89.155	0.47068					27	20	3	0	0	0	0.37624	1	10450	10450		16.473	0	1	142370			834	8681	591	592	1044	1044					0.10477601441925799
AINKRTIN	8	Unmodified	_AINKRTIN_					0	0	0			REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.2799987792969	2	465.279983	928.545414	-0.11899	-5.5362E-05	0.19844	9.2329E-05	0.079452	3.6968E-05	465.2799248826243	89.079	2.3276	89.147	88.595	90.922	0.068161					120	54	4	0	0	0	0.88601	1	9088	9088		34.173	0.67956	1	1620100	+		835	20406	592	593	1045	1045					0.07828295882950442
AIPAAGILYK	10	Unmodified	_AIPAAGILYK_					0	0	0			REV__nc|ENSG00000135476|Q14674-2|ESPL1	REV__nc|ENSG00000135476|Q14674-2|ESPL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.8074645996094	2	508.810585	1015.60662	-0.95318	-0.00048499	-4.4844	-0.0022817	-5.4376	-0.0027667	508.8082107511822	83.728	2.644	83.728	82.933	85.577	0					147	63	5	0	0	0	0.86201	1	7830	7830		24.203	2.2429	1	4920100	+		836	19228	593	594	1046	1046					0.09943807862362064
AIPALIIVVV	10	Unmodified	_AIPALIIVVV_					0	0	0		nc|ENSG00000069122|Q8IZF2-3|ADGRF5;nc|ENSG00000069122|Q8IZF2-2|ADGRF5;ENSG00000069122|ENST00000283296|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3450622558594	2	504.346803	1006.67905	0.11336	5.7171E-05	-3.112	-0.0015695	-2.9987	-0.0015124	504.3451867946114	55.153	1.8423	55.554	54.023	55.866	0.40101					89	43	3	0	0	0	0.86786	1	5644	5644		26.796	7.4361	1	1856800			837	1213	594	595	1047	1047					0.17598141935945932
AIPALIIVVV	10	Unmodified	_AIPALIIVVV_					0	0	0		nc|ENSG00000069122|Q8IZF2-3|ADGRF5;nc|ENSG00000069122|Q8IZF2-2|ADGRF5;ENSG00000069122|ENST00000283296|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3459167480469	2	504.346803	1006.67905	-0.55637	-0.0002806	-2.161	-0.0010899	-2.7173	-0.0013705	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.85108	1	5754	5754		19.36	6.4008	1	1905800			838	1213	594	595	1048	1048					0.17598141935945932
AIPALIIVVV	10	Unmodified	_AIPALIIVVV_					0	0	0		nc|ENSG00000069122|Q8IZF2-3|ADGRF5;nc|ENSG00000069122|Q8IZF2-2|ADGRF5;ENSG00000069122|ENST00000283296|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3450012207031	2	504.346803	1006.67905	0.37851	0.0001909	-3.3786	-0.001704	-3.0001	-0.0015131	504.3450503233635	54.756	1.9259	55.325	53.982	55.908	0.56836					89	45	3	0	0	0	0.85976	1	5635	5635		35.201	15.841	1	1764400			839	1213	594	595	1049	1049					0.17598141935945932
AIPALLVTILI	11	Unmodified	_AIPALLVTILI_					0	0	0		nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;ENSG00000080493|ENST00000264485|SLC4A4;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4;nc|ENSG00000080493|Q9Y6R1-4|SLC4A4	nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.853271484375	2	568.886293	1135.75803	0.51949	0.00029553	3.6653	0.0020851	4.1848	0.0023807	568.8890468007822	102.19	0.79518	102.39	101.97	102.77	0.19484					30	19	2	0	0	0	0.17529	1	10752	10752		42.396	14.514	1	305730			840	1441	595	596	1050	1050					0.19558369170249534
AIPATSKDN	9	Unmodified	_AIPATSKDN_					0	0	0			REV__ENSG00000178691|ENST00000322652|SUZ12	REV__ENSG00000178691|ENST00000322652|SUZ12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.7872314453125	2	458.740357	915.46616	1.7284	0.00079288	-2.7624	-0.0012672	-1.034	-0.00047434	458.7396577286715	93.167	0.3996	93.106	92.888	93.287	-0.061432					11	9	2	0	0	0	0.20789	1	9893	9893		40.778	5.1599	1	47229	+		841	22289	596	597	1051	1051					0.00504604138131981
AIPELKASIKK	11	Unmodified	_AIPELKASIKK_					0	0	0		nc|ENSG00000146701|P40926-2|MDH2;ENSG00000146701|ENST00000315758|MDH2	nc|ENSG00000146701|P40926-2|MDH2	nc|ENSG00000146701|P40926-2|MDH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.3795166015625	2	599.381906	1196.74926	-0.54345	-0.00032574	-2.532	-0.0015176	-3.0754	-0.0018434	599.3802252506414	103.57	3.0198	103.57	103.18	106.2	-0.0035782					175	72	5	0	0	0	0.638	2	11195	11195;11231		40.058	0.80534	1	11998000			842	4855	597	598	1052;1053	1052					0.15875395533726078
AIPELKASIKK	11	Unmodified	_AIPELKASIKK_					0	0	0		nc|ENSG00000146701|P40926-2|MDH2;ENSG00000146701|ENST00000315758|MDH2	nc|ENSG00000146701|P40926-2|MDH2	nc|ENSG00000146701|P40926-2|MDH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3797607421875	2	599.381906	1196.74926	0.89992	0.0005394	-3.8863	-0.0023293	-2.9863	-0.00179	599.379410135585	103.38	3.1227	103.51	103.01	106.14	0.12621					246	78	5	0	0	0	0.53361	2	10932	10920;10932		49.536	20.366	1	20012000			843	4855	597	598	1054;1055	1055					0.15875395533726078
AIPELKASIKK	11	Unmodified	_AIPELKASIKK_					0	0	0		nc|ENSG00000146701|P40926-2|MDH2;ENSG00000146701|ENST00000315758|MDH2	nc|ENSG00000146701|P40926-2|MDH2	nc|ENSG00000146701|P40926-2|MDH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3792724609375	2	599.381906	1196.74926	-1.2913	-0.00077396	-1.7358	-0.0010404	-3.0271	-0.0018144	599.3806932084216	103.36	2.8938	103.47	103.07	105.96	0.11494					245	72	6	0	0	0	0.61369	3	10958	10830;10947;10958		42.864	6.4175	1	20299000			844	4855	597	598	1056;1057;1058	1058					0.15875395533726078
AIPELKASIKK	11	Unmodified	_AIPELKASIKK_					0	0	0		nc|ENSG00000146701|P40926-2|MDH2;ENSG00000146701|ENST00000315758|MDH2	nc|ENSG00000146701|P40926-2|MDH2	nc|ENSG00000146701|P40926-2|MDH2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	599.381906	1196.74926	2.9711	0.0017808	-4.5445	-0.0027239	-1.5735	-0.0009431	599.3789549503108	103.1	1.3745	103.39	103.15	104.53	0.28442	-0.045676	-0.0011777	NaN	49.536	60	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1766200			845	4855	597	598							0.15875395533726078
AIPGARKVPL	10	Unmodified	_AIPGARKVPL_					0	0	0		ENSG00000182103|ENST00000329203|FAM181B	ENSG00000182103|ENST00000329203|FAM181B	ENSG00000182103|ENST00000329203|FAM181B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.3275146484375	2	511.329476	1020.6444	-0.73647	-0.00037658	-3.6891	-0.0018863	-4.4256	-0.0022629	511.3274858429374	97.597	1.7759	97.597	97.074	98.849	0					91	42	3	0	0	0	0.85939	1	9842	9842		23.042	1.0826	1	585290			846	7422	598	599	1059	1059					0.13490318847846083
AIPGARKVPL	10	Unmodified	_AIPGARKVPL_					0	0	0		ENSG00000182103|ENST00000329203|FAM181B	ENSG00000182103|ENST00000329203|FAM181B	ENSG00000182103|ENST00000329203|FAM181B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.32757568359375	2	511.329476	1020.6444	-0.33604	-0.00017183	-4.3544	-0.0022265	-4.6904	-0.0023984	511.32714059375644	97.081	2.0161	97.312	96.825	98.841	0.23103					133	46	4	0	0	0	0.8488	2	10080	10056;10080		29.15	3.6994	1	3439200			847	7422	598	599	1060;1061	1061					0.13490318847846083
AIPSTIEIVT	10	Unmodified	_AIPSTIEIVT_					0	0	0		ENST00000595461.1_19:22028307-22034723:-|nuORF	ENST00000595461.1_19:22028307-22034723:-|nuORF	ENST00000595461.1_19:22028307-22034723:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3027954101562	2	522.30279	1042.59103	-0.92206	-0.00048159	1.288	0.00067273	0.36595	0.00019114	522.3031073065364	91.381	0.50801	91.852	91.606	92.114	0.47068					20	11	2	0	0	0	0.37624	1	10896	10896		27.882	15.675	1	248870			848	14329	599	600	1062	1062					0.0714347655466554
AIPSTIEIVT	10	Unmodified	_AIPSTIEIVT_					0	0	0		ENST00000595461.1_19:22028307-22034723:-|nuORF	ENST00000595461.1_19:22028307-22034723:-|nuORF	ENST00000595461.1_19:22028307-22034723:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	522.30279	1042.59103	1.6598	0.00086691	-1.4942	-0.00078042	0.16558	8.6483E-05	522.3016498785358	91.235	0.59264	91.685	91.505	92.098	0.44958	-0.083577	-0.0013663	NaN	14.865	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176430			849	14329	599	600							0.0714347655466554
AIPVEKSV	8	Unmodified	_AIPVEKSV_					0	0	0		ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1	ENSG00000198554|ENST00000360586|WDHD1	ENSG00000198554|ENST00000360586|WDHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7518005371094	2	421.752736	841.490919	-1.7818	-0.0007515	-1.2969	-0.00054696	-3.0787	-0.0012985	421.7522177518738	76.828	1.8707	76.953	75.249	77.12	0.12485					132	61	3	0	0	0	0.87479	1	7168	7168		30.504	3.7075	1	487030			850	8286	600	601	1063	1063					0.06383284011531032
AIQNPTMINK	10	Unmodified	_AIQNPTMINK_					0	0	0		nc|ENSG00000167182|Q02086-2|SP2;ENSG00000167182|ENST00000376741|SP2	nc|ENSG00000167182|Q02086-2|SP2	nc|ENSG00000167182|Q02086-2|SP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.305908203125	2	565.305341	1128.59613	-0.95082	-0.0005375	0.6088	0.00034416	-0.34202	-0.00019335	565.3055584505004	39.596	0.96898	39.964	39.384	40.353	0.36797					46	22	3	0	0	0	0.20077	1	3322	3322		85.862	36.326	1	526270			851	6272	601	602	1064	1064					0.03697457145631233
AIQNPTMINK	10	Unmodified	_AIQNPTMINK_					0	0	0		nc|ENSG00000167182|Q02086-2|SP2;ENSG00000167182|ENST00000376741|SP2	nc|ENSG00000167182|Q02086-2|SP2	nc|ENSG00000167182|Q02086-2|SP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.3052978515625	2	565.305341	1128.59613	-0.61436	-0.0003473	0.551	0.00031148	-0.063364	-3.582E-05	565.3052607743309	39.377	1.2859	39.932	39.194	40.48	0.55449					63	29	3	0	0	0	0.11784	5	3304	3256;3304;3317;3328;3347		99.013	21.375	1	446280			852	6272	601	602	1065;1066;1067;1068;1069	1066					0.03697457145631233
AIQPQAQVTMQ	11	Unmodified	_AIQPQAQVTMQ_					0	0	0			REV__ENST00000494094.5_1_2:208420359-208432297:+|nuORF	REV__ENST00000494094.5_1_2:208420359-208432297:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5147705078125	3	405.544779	1213.61251	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.713	1	23.807	23.307	24.307	0.094501								0	0	0	0.56276	1	781	781		21.032	0.19508	1		+		853	18299	602	603	1070	1070					0.01424538311721335
AIRIEIVVY	9	Unmodified	_AIRIEIVVY_					0	0	0		nc|ENSG00000138336|Q8NFU7-2|TET1;ENSG00000138336|ENST00000373644|TET1	nc|ENSG00000138336|Q8NFU7-2|TET1	nc|ENSG00000138336|Q8NFU7-2|TET1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3268432617188	2	538.329142	1074.64373	-0.51595	-0.00027775	-2.4109	-0.0012978	-2.9268	-0.0015756	538.3278592314944	105.99	1.6493	105.99	105.37	107.02	0					100	37	3	0	0	0	0.7932	1	10996	10996		23.042	2.0956	1	642860			854	4287	603	604	1071	1071					0.10939479408148145
AIRKLGLV	8	Unmodified	_AIRKLGLV_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002014160156	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82419	1	8027	8027		13.775	0	1	5485100			855	6039	604	605	1072	1072					0.14627262273370434
AIRKTHGT	8	Unmodified	_AIRKTHGT_					0	0	0			REV__ENSG00000176853|ENST00000334705|FAM91A1	REV__ENSG00000176853|ENST00000334705|FAM91A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2411193847656	2	442.259051	882.503549	1.3936	0.00061634	-1.2692	-0.00056129	0.12447	5.5047E-05	442.2583329613619	82.95	0.59056	83.01	82.732	83.322	0.059166					23	13	2	0	0	0	0.4196	1	8305	8305		35.618	5.1146	1	62429	+		856	22148	605	606	1073	1073					0.05759740194423557
AIRLLVTYN	9	Unmodified	_AIRLLVTYN_					0	0	0			REV__ENSG00000049769|ENST00000055335|PPP1R3F	REV__ENSG00000049769|ENST00000055335|PPP1R3F	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8165893554688	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.7932	1	8254	8254		19.997	0.6368	1	859730	+		857	16373	606	607	1074	1074					0.09498308748334239
AIRNDEEL	8	Unmodified	_AIRNDEEL_					0	0	0		nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000188486|ENST00000530167|H2AX;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;chr12:14774912-14775291|47|17.45|0.95|4.21|+|ENST00000389078|H2AJ,H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000164508|ENST00000297012|H2AC1;ENST00000479986.1_1_6:27858584-27860837:-|nuORF	nc|ENSG00000246705|Q9BTM1-2|H2AJ	nc|ENSG00000246705|Q9BTM1-2|H2AJ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.24285888671875	2	480.243264	958.471974	-1.5873	-0.00076229	1.5949	0.00076594	0.0076101	3.6547E-06	480.243773059925	32.707	1.1523	32.706	32.292	33.444	-0.0016365					48	27	3	0	0	0	0.91472	1	1881	1881		44.117	1.6423	1	175860			858	116	607	608	1075	1075					-0.008922973501853448
AIRNDEEL	8	Unmodified	_AIRNDEEL_					0	0	0		nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000188486|ENST00000530167|H2AX;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;chr12:14774912-14775291|47|17.45|0.95|4.21|+|ENST00000389078|H2AJ,H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000164508|ENST00000297012|H2AC1;ENST00000479986.1_1_6:27858584-27860837:-|nuORF	nc|ENSG00000246705|Q9BTM1-2|H2AJ	nc|ENSG00000246705|Q9BTM1-2|H2AJ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2427978515625	2	480.243264	958.471974	0.66014	0.00031703	-0.78822	-0.00037854	-0.12808	-6.1508E-05	480.24276597452007	32.804	0.63803	32.931	32.59	33.228	0.12643					33	14	3	0	0	0	0.36305	2	2313	2313;2324		84.916	10.941	1	770060			859	116	607	608	1076;1077	1076					-0.008922973501853448
AIRNDEEL	8	Unmodified	_AIRNDEEL_					0	0	0		nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000188486|ENST00000530167|H2AX;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;chr12:14774912-14775291|47|17.45|0.95|4.21|+|ENST00000389078|H2AJ,H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000164508|ENST00000297012|H2AC1;ENST00000479986.1_1_6:27858584-27860837:-|nuORF	nc|ENSG00000246705|Q9BTM1-2|H2AJ	nc|ENSG00000246705|Q9BTM1-2|H2AJ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2433166503906	2	480.243264	958.471974	0.15617	7.4998E-05	-0.12994	-6.2404E-05	0.026223	1.2593E-05	480.2430582495673	32.784	0.59089	32.996	32.68	33.271	0.21168					36	13	4	0	0	0	0.20947	2	2326	2326;2339		108.09	17.718	1	925400			860	116	607	608	1078;1079	1078					-0.008922973501853448
AIRNDEEL	8	Unmodified	_AIRNDEEL_					0	0	0		nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000188486|ENST00000530167|H2AX;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;chr12:14774912-14775291|47|17.45|0.95|4.21|+|ENST00000389078|H2AJ,H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000164508|ENST00000297012|H2AC1;ENST00000479986.1_1_6:27858584-27860837:-|nuORF	nc|ENSG00000246705|Q9BTM1-2|H2AJ	nc|ENSG00000246705|Q9BTM1-2|H2AJ	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	480.243264	958.471974	-0.91555	-0.00043969	0.26612	0.0001278	-0.64944	-0.00031189	480.2436763741675	32.778	0.3976	32.83	32.613	33.011	0.05246	0.075895	0.0001664	NaN	108.09	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74451			861	116	607	608							-0.008922973501853448
AIRNDEEL	8	Unmodified	_AIRNDEEL_					0	0	0		nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000188486|ENST00000530167|H2AX;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;chr12:14774912-14775291|47|17.45|0.95|4.21|+|ENST00000389078|H2AJ,H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000164508|ENST00000297012|H2AC1;ENST00000479986.1_1_6:27858584-27860837:-|nuORF	nc|ENSG00000246705|Q9BTM1-2|H2AJ	nc|ENSG00000246705|Q9BTM1-2|H2AJ	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	480.243264	958.471974	0.16769	8.0534E-05	-0.37625	-0.00018069	-0.20855	-0.00010016	480.24274050768526	32.517	0.366	32.628	32.426	32.792	0.11117	-0.12619	-0.00045058	NaN	108.09	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95664			862	116	607	608							-0.008922973501853448
AIRNDEEL	8	Unmodified	_AIRNDEEL_					0	0	0		nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000188486|ENST00000530167|H2AX;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;chr12:14774912-14775291|47|17.45|0.95|4.21|+|ENST00000389078|H2AJ,H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000164508|ENST00000297012|H2AC1;ENST00000479986.1_1_6:27858584-27860837:-|nuORF	nc|ENSG00000246705|Q9BTM1-2|H2AJ	nc|ENSG00000246705|Q9BTM1-2|H2AJ	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	480.243264	958.471974	0.29145	0.00013996	-0.19009	-9.129E-05	0.10135	4.8674E-05	480.2431729570985	32.611	0.50403	32.579	32.319	32.823	-0.032677	-0.1756	-0.00027178	NaN	108.09	31	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74648			863	116	607	608							-0.008922973501853448
AIRVTRHKNAM	11	Unmodified	_AIRVTRHKNAM_					0	0	0		ENSG00000099812|ENST00000215582|MISP	ENSG00000099812|ENST00000215582|MISP	ENSG00000099812|ENST00000215582|MISP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.8723754882812	2	648.869505	1295.72446	-0.0025716	-1.6686E-06	3.7908	0.0024597	3.7882	0.0024581	648.8719439244529	99.494	2.1461	99.535	98.831	100.98	0.041107					134	49	3	0	0	0	0.58425	1	10619	10619		45.972	1.5951	1	250130			864	1768	608	609	1080	1080					0.08842437179396256
AISIHLGFN	9	Unmodified	_AISIHLGFN_					0	0	0		ENSG00000184564|ENST00000647374|SLITRK6	ENSG00000184564|ENST00000647374|SLITRK6	ENSG00000184564|ENST00000647374|SLITRK6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.2669677734375	2	486.269084	970.523616	-1.6066	-0.00078124	-2.3049	-0.0011208	-3.9115	-0.0019021	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.72402	1	8363	8363		38.806	1.647	1	1531500			865	7622	609	610	1081	1081					0.03717491134386819
AISKKNRN	8	Unmodified	_AISKKNRN_					0	0	0			REV__nc|ENSG00000175600|Q9HAC7-4|SUGCT	REV__nc|ENSG00000175600|Q9HAC7-4|SUGCT	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7776184082031	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.535	1	79.535	79.035	80.035	0								0	0	0	0.29755	1	7318	7318		24.203	1.1603	1		+		866	22077	610	611	1082	1082					0.07307411740180214
AISKKNRN	8	Unmodified	_AISKKNRN_					0	0	0			REV__nc|ENSG00000175600|Q9HAC7-4|SUGCT	REV__nc|ENSG00000175600|Q9HAC7-4|SUGCT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.77783203125	2	465.777608	929.540663	-0.1189	-5.538E-05	0.19446	9.0574E-05	0.07556	3.5194E-05	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.87922	1	7872	7872		31.955	1.6371	1	345200	+		867	22077	610	611	1083	1083					0.07307411740180214
AISKSKLS	8	Unmodified	_AISKSKLS_					0	0	0		nc|ENSG00000157388|Q01668-3|CACNA1D;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000157388|Q01668-2|CACNA1D;nc|ENSG00000157388|Q01668-4|CACNA1D	nc|ENSG00000157388|Q01668-3|CACNA1D	nc|ENSG00000157388|Q01668-3|CACNA1D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.259033203125	2	417.258185	832.501818	-0.38397	-0.00016022	1.2525	0.00052261	0.86852	0.0003624	417.2585749889359	22.175	2.752	22.117	21.499	24.251	-0.05867					139	87	2	0	0	0	0.79929	1	690	690		18.324	0	1	87379			868	5426	611	612	1084	1084					0.07886686385825215
AISSATYS	8	Unmodified	_AISSATYS_					0	0	0			REV__nc|ENSG00000090975|Q9BZ72-3|PITPNM2	REV__nc|ENSG00000090975|Q9BZ72-3|PITPNM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.1964416503906	2	400.195251	798.375948	0.9179	0.00036734	-0.83352	-0.00033357	0.084388	3.3772E-05	400.1951514766141	86.536	1.7122	86.462	86.013	87.725	-0.073769					84	39	4	0	0	0	0.9159	1	8933	8933		44.531	7.5026	1	3325200	+		869	17001	612	613	1085	1085					-0.03130445190276987
AISSATYS	8	Unmodified	_AISSATYS_					0	0	0			REV__nc|ENSG00000090975|Q9BZ72-3|PITPNM2	REV__nc|ENSG00000090975|Q9BZ72-3|PITPNM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.19573974609375	2	400.195251	798.375948	0.56967	0.00022798	-0.43419	-0.00017376	0.13548	5.422E-05	400.1953507719879	82.54	1.3237	82.686	82.288	83.611	0.1455					67	30	3	0	0	0	0.91005	1	7966	7966		42.474	14.22	1	6052300	+		870	17001	612	613	1086	1086					-0.03130445190276987
AISSATYS	8	Unmodified	_AISSATYS_					0	0	0			REV__nc|ENSG00000090975|Q9BZ72-3|PITPNM2	REV__nc|ENSG00000090975|Q9BZ72-3|PITPNM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.1959228515625	2	400.195251	798.375948	0.60168	0.00024079	-0.083456	-3.3399E-05	0.51822	0.00020739	400.19549041096013	86.068	1.3495	86.217	85.858	87.207	0.14902					77	31	4	0	0	0	0.89457	1	8444	8444		37.028	7.1869	1	5538900	+		871	17001	612	613	1087	1087					-0.03130445190276987
AISSGQYGEG	10	Unmodified	_AISSGQYGEG_					0	0	0		ENSG00000007545|ENST00000397412|CRAMP1	ENSG00000007545|ENST00000397412|CRAMP1	ENSG00000007545|ENST00000397412|CRAMP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.71868896484375	2	484.719621	967.42469	-0.725	-0.00035142	-2.1193	-0.0010273	-2.8443	-0.0013787	484.71847241575296	100.07	1.4337	100.28	99.734	101.17	0.21511					64	33	3	0	0	0	0.86106	1	10461	10461		33.922	4.0801	1	545270			872	729	613	614	1088	1088					-0.060325766211803966
AISVNHVKRAI	11	Unmodified	_AISVNHVKRAI_					0	0	0		ENST00000369232.2_1_6:99949817-99958096:-|nuORF;nc|ENSG00000123552|Q70EL2-2|USP45;ENSG00000123552|ENST00000500704|USP45	ENST00000369232.2_1_6:99949817-99958096:-|nuORF	ENST00000369232.2_1_6:99949817-99958096:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2467346191406	3	403.247173	1206.71969	0.73411	0.00029603	-1.4803	-0.00059692	-0.74617	-0.00030089	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.78986	1	11123	11123		12.433	0	1	18617000			873	3278	614	615	1089	1089					0.12459876308275852
AITATELLI	9	Unmodified	_AITATELLI_					0	0	0		ENST00000526878.5_1_11:460175-490579:+|nuORF;ENSG00000174915|ENST00000308020|PTDSS2	ENST00000526878.5_1_11:460175-490579:+|nuORF	ENST00000526878.5_1_11:460175-490579:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.76348876953125	2	472.786776	943.558998	-0.73543	-0.0003477	-0.035684	-1.6871E-05	-0.77111	-0.00036457	472.786936311864	29.222	0.12994	29.193	29.084	29.214	-0.029207					4	2	2	0	0	0	0.20789	1	1819	1819		25.45	1.2474	1	24385			874	6971	615	616	1090	1090					0.08496108871543129
AITFFMGKVAL	11	Unmodified	_AITFFMGKVAL_					0	0	0		ENSG00000256053|ENST00000409074|COA8;nc|ENSG00000256053|Q96IL0|COA8	ENSG00000256053|ENST00000409074|COA8	ENSG00000256053|ENST00000409074|COA8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3806762695312	2	599.338652	1196.66275	-1.9033	-0.0011407	4.4254	0.0026523	2.5221	0.0015116	599.3414089314373	42.05	0.36076	42.748	42.61	42.97	0.69754					16	8	2	0	0	0	0.17551	1	3735	3735		37.812	0	1	144330			875	8892	616	617	1091	1091					0.07228692707553819
AITLSRRG	8	Unmodified	_AITLSRRG_					0	0	0		ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2654724121094	2	437.266876	872.519199	-2.1366	-0.00093428	-0.53823	-0.00023535	-2.6749	-0.0011696	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.87479	1	670	670		30.504	0.6621	1	999210			876	13345	617	618	1092	1092					0.07784026711476599
AITLSRRG	8	Unmodified	_AITLSRRG_					0	0	0		ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2655334472656	2	437.266876	872.519199	0.61137	0.00026733	-3.2	-0.0013992	-2.5886	-0.0011319	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.87064	1	884	884		29.15	0.89528	1	1313200			877	13345	617	618	1093	1093					0.07784026711476599
AITLSRRG	8	Unmodified	_AITLSRRG_					0	0	0		ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2655029296875	2	437.266876	872.519199	-1.6274	-0.00071159	-1.0909	-0.00047703	-2.7183	-0.0011886	437.2663457196616	22.467	1.2654	22.516	22.142	23.407	0.048553					168	64	5	0	0	0	0.84341	1	686	686		24.203	1.1603	1	1779900			878	13345	617	618	1094	1094					0.07784026711476599
AITLSRRG	8	Unmodified	_AITLSRRG_					0	0	0		ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2654724121094	2	437.266876	872.519199	0.46111	0.00020163	-3.2258	-0.0014106	-2.7647	-0.0012089	437.2654513325837	23.967	1.9466	23.969	23.291	25.237	0.0018959					213	95	5	0	0	0	0.87479	1	768	768		30.504	7.4612	1	2561300			879	13345	617	618	1095	1095					0.07784026711476599
AITLSRRG	8	Unmodified	_AITLSRRG_					0	0	0		ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26531982421875	2	437.266876	872.519199	0.27465	0.0001201	-3.2994	-0.0014427	-3.0248	-0.0013226	437.2655143696572	24.107	1.3602	23.725	23.153	24.514	-0.38178					100	30	5	0	0	0	0.87064	1	1175	1175		29.15	0.89528	1	12963000			880	13345	617	618	1096	1096					0.07784026711476599
AITLSRRG	8	Unmodified	_AITLSRRG_					0	0	0		ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26519775390625	2	437.266876	872.519199	0.051124	2.2355E-05	-3.1793	-0.0013902	-3.1282	-0.0013678	437.26563820123806	25.538	2.1653	25.281	24.501	26.666	-0.25721					170	48	6	0	0	0	0.8537	2	1232	1232;1393		32.812	4.5581	1	21512000			881	13345	617	618	1097;1098	1097					0.07784026711476599
AITLSRRG	8	Unmodified	_AITLSRRG_					0	0	0		ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	ENST00000530460.1_3_11:76092656-76092758:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26507568359375	2	437.266876	872.519199	0.6899	0.00030167	-3.1873	-0.0013937	-2.4974	-0.001092	437.2653488785587	29.45	4.4235	29.36	28.715	33.139	-0.089546					176	102	3	0	0	0	0.8347	1	1841	1841		23.042	1.0826	1	563170			882	13345	617	618	1099	1099					0.07784026711476599
AITPLAYV	8	Unmodified	_AITPLAYV_					0	0	0			REV__ENSG00000111371|ENST00000398637|SLC38A1	REV__ENSG00000111371|ENST00000398637|SLC38A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.2501525878906	2	424.249829	846.485105	2.8565	0.0012119	-2.4364	-0.0010336	0.42017	0.00017826	424.2488058967198	107.13	1.0598	107.16	106.76	107.82	0.035614					82	24	5	0	0	0	0.87807	1	11731	11731		31.579	0	1	4411900	+		883	17869	618	619	1100	1100					0.05572185499852367
AITQFSCNI	9	Carbamidomethyl (C)	_AITQFSC(Carbamidomethyl (C))NI_	AITQFSC(1)NI		AITQFSC(62)NI		0	1	0		ENSG00000204713|ENST00000377199|TRIM27;ENST00000496091.1_1_6:28882986-28887935:-|nuORF;ENST00000498117.1_1_6:28879453-28889728:-|nuORF;nc|ENSG00000204713|P14373-2|TRIM27;ENST00000481474.5_1_6:28876558-28891553:-|nuORF	ENSG00000204713|ENST00000377199|TRIM27	ENSG00000204713|ENST00000377199|TRIM27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.2572021484375	2	527.255317	1052.49608	0.86662	0.00045693	2.6126	0.0013775	3.4792	0.0018344	527.256566104279	25.63	0.81838	25.598	25.164	25.983	-0.032125					65	25	4	0	0	0	0.33718	1	1020	1020		62.107	7.3851	1	358050			884	8484	619	620	1101	1101	104				-0.028067801881888954
AIVAKVPIT	9	Unmodified	_AIVAKVPIT_					0	0	0			REV__ENSG00000075568|ENST00000186436|TMEM131	REV__ENSG00000075568|ENST00000186436|TMEM131	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30169677734375	2	456.299853	910.585153	-1.7927	-0.00081802	3.97	0.0018115	2.1773	0.00099349	456.30151188064457	45.052	1.9056	45.052	44.154	46.06	0					117	46	3	0	0	0	0.7932	1	3434	3434		21.96	2.5999	1	498210	+		885	16713	620	621	1102	1102					0.1262842283365444
AIVAKVPIT	9	Unmodified	_AIVAKVPIT_					0	0	0			REV__ENSG00000075568|ENST00000186436|TMEM131	REV__ENSG00000075568|ENST00000186436|TMEM131	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3005676269531	2	456.299853	910.585153	0.2873	0.0001311	2.3096	0.0010538	2.5969	0.0011849	456.30080462463604	48.151	1.3839	48.189	47.742	49.126	0.037735					72	38	3	0	0	0	0.7932	1	3670	3670		21.96	1.4781	1	274320	+		886	16713	620	621	1103	1103					0.1262842283365444
AIVDKLLP	8	Unmodified	_AIVDKLLP_					0	0	0			REV__ENST00000485781.5_1_2:63816129-63824744:+|nuORF	REV__ENST00000485781.5_1_2:63816129-63824744:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7796936035156	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.89962	1	3963	3963		38.806	5.2906	1	1803700	+		887	16206	621	622	1104	1104					0.10388447425293634
AIVEDHSLV	9	Unmodified	_AIVEDHSLV_					0	0	0		ENSG00000101350|ENST00000375712|KIF3B	ENSG00000101350|ENST00000375712|KIF3B	ENSG00000101350|ENST00000375712|KIF3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7644348144531	2	491.763832	981.513111	-0.7856	-0.00038633	0.37534	0.00018458	-0.41026	-0.00020175	491.76404017316463	63.827	0.57457	63.857	63.658	64.233	0.030243					42	23	2	0	0	0	0.74721	1	5609	5609		37.159	2.9866	1	123660			888	1936	622	623	1105	1105					0.021614636892991257
AIVELVINLLL	11	Unmodified	_AIVELVINLLL_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|156|3|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|156|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9293518066406	3	403.93208	1208.77441	-1.8895	-0.00076324	-4.4403	-0.0017936	-6.3298	-0.0025568	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.73621	1	3719	3719		25.126	5.8633	1	2300300	+		889	29632	623	624	1106	1106					0.1783745033633295
AIVGHQFK	8	Unmodified	_AIVGHQFK_					0	0	0			REV__ENST00000484003.1_1_6:32810548-32812193:-|nuORF	REV__ENST00000484003.1_1_6:32810548-32812193:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2583923339844	2	450.25852	898.502486	2.5113	0.0011307	-3.0089	-0.0013548	-0.4977	-0.00022409	450.25712397191535	26.02	1.659	25.589	25.109	26.768	-0.4311					129	37	5	0	0	0	0.45589	2	1422	1410;1422		77.944	9.4591	1	8434200	+		890	23474	624	625	1107;1108	1108					0.04917525825510438
AIVGLAWRP	9	Unmodified	_AIVGLAWRP_					0	0	0			REV__ENSG00000177238|ENST00000322122|TRIM72	REV__ENSG00000177238|ENST00000322122|TRIM72	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79595947265625	2	491.795269	981.575986	-1.6329	-0.00080306	1.561	0.00076767	-0.071965	-3.5392E-05	491.7959208879528	43.173	1.2305	43.173	42.794	44.024	0					52	29	2	0	0	0	0.7932	1	3074	3074		18.324	0.95945	1	189890	+		891	22191	625	626	1109	1109					0.08446074267988024
AIVGLAWRP	9	Unmodified	_AIVGLAWRP_					0	0	0			REV__ENSG00000177238|ENST00000322122|TRIM72	REV__ENSG00000177238|ENST00000322122|TRIM72	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79620361328125	2	491.795269	981.575986	-0.71044	-0.00034939	1.6504	0.00081164	0.93993	0.00046225	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.7932	1	4013	4013		18.324	0	1	571510	+		892	22191	625	626	1110	1110					0.08446074267988024
AIVGLIVK	8	Unmodified	_AIVGLIVK_					0	0	0			REV__nc|ENSG00000163053|Q7RTX9-2|SLC16A14	REV__nc|ENSG00000163053|Q7RTX9-2|SLC16A14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7853698730469	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.85277	1	1707	1707		25.45	6.0902	1	1965300	+		893	20876	626	627	1111	1111					0.13981055150509292
AIVGLIVK	8	Unmodified	_AIVGLIVK_					0	0	0			REV__nc|ENSG00000163053|Q7RTX9-2|SLC16A14	REV__nc|ENSG00000163053|Q7RTX9-2|SLC16A14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7848815917969	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.83058	1	1690	1690		12.959	3.4886	1	1879900	+		894	20876	626	627	1112	1112					0.13981055150509292
AIVGLLIDL	9	Unmodified	_AIVGLLIDL_					0	0	0		chr2:189088772-189089872|16|51.81|0.05|9.92|-|1|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|33	chr2:189088772-189089872|16|51.81|0.05|9.92|-|1|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|33	chr2:189088772-189089872|16|51.81|0.05|9.92|-|1|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|33	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.79998779296875	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	1	2746	2746		24.203	1.1603	1	489490			895	322	627	628	1113	1113					0.11905003113804469
AIVIALPLTLL	11	Unmodified	_AIVIALPLTLL_					0	0	0		ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8531494140625	2	568.886293	1135.75803	-0.36335	-0.0002067	3.3098	0.0018829	2.9464	0.0016762	568.8888706566698	102.69	0.35441	102.69	102.35	102.71	0					11	8	2	0	0	0	0.17404	1	10485	10485		35.618	1.4457	1	128180			896	4971	628	629	1114	1114					0.19558369170249534
AIVINRAR	8	Unmodified	_AIVINRAR_					0	0	0		nc|ENSG00000127125|Q9HAB8-2|PPCS;ENSG00000127125|ENST00000372561|PPCS	nc|ENSG00000127125|Q9HAB8-2|PPCS	nc|ENSG00000127125|Q9HAB8-2|PPCS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.78955078125	2	456.790518	911.566484	0.25783	0.00011777	4.1861	0.0019121	4.4439	0.0020299	456.79223981105497	41.505	1.1583	41.474	40.833	41.991	-0.030987					78	30	4	0	0	0	0.884	1	2966	2966		33.516	3.0119	1	325120			897	3485	629	630	1115	1115					0.10716305982464291
AIVIVPIST	9	Unmodified	_AIVIVPIST_					0	0	0			REV__ENSG00000101825|ENST00000217939|MXRA5	REV__ENSG00000101825|ENST00000217939|MXRA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7928161621094	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.77546	1	2883	2883		31.955	1.4512	1	548640	+		898	17304	630	631	1116	1116					0.10984716596738053
AIVKRAGS	8	Unmodified	_AIVKRAGS_					0	0	0		ENSG00000167971|ENST00000343516|CASKIN1	ENSG00000167971|ENST00000343516|CASKIN1	ENSG00000167971|ENST00000343516|CASKIN1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2500305175781	2	401.250695	800.486836	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.12	1	111.16	110.66	111.66	0.041832								0	0	0	0.29344	1	13448	13448		31.955	7.4508	1				899	6346	631	632	1117	1117					0.07861239308476797
AIVLIVLCLIG	11	Unmodified	_AIVLIVLCLIG_					0	0	0			REV__nc|ENSG00000172243|Q9BXN2-9|CLEC7A	REV__nc|ENSG00000172243|Q9BXN2-9|CLEC7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	563.8688354492188	2	563.867046	1125.71954	0.97876	0.00055189	2.8285	0.0015949	3.8073	0.0021468	563.8683902252228	15.49	0.24173	15.466	15.325	15.567	-0.024207					13	6	3	0	0	0	0.7711	1	47	47		17.365	3.2278	1	183090	+		900	21813	632	633	1118	1118					0.16170740264033157
AIVLPAGAL	9	Unmodified	_AIVLPAGAL_					0	0	0		ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C	ENSG00000171988|ENST00000399262|JMJD1C	ENSG00000171988|ENST00000399262|JMJD1C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7665100097656	2	412.765646	823.516739	1.0742	0.00044338	1.0077	0.00041595	2.0819	0.00085933	412.7659693172007	40.207	1.4192	40.217	39.687	41.106	0.0092812					79	35	3	0	0	0	0.78292	1	2864	2864		29.842	0	1	573960			901	6731	633	634	1119	1119					0.09792178253815109
AIVLTVIPG	9	Unmodified	_AIVLTVIPG_					0	0	0		ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.78759765625	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.49378	3	2838	2791;2814;2838		52.299	0	1	11085000			902	11842	634	635	1120;1121;1122	1122					0.11308733942337312
AIVLTVIPG	9	Unmodified	_AIVLTVIPG_					0	0	0		ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7876281738281	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.64338	5	3060	3049;3060;3072;3084;3144		44.531	2.0566	1	12471000			903	11842	634	635	1123;1124;1125;1126;1127	1124					0.11308733942337312
AIVLTVIPG	9	Unmodified	_AIVLTVIPG_					0	0	0		ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7875671386719	2	441.786579	881.558604	-1.2332	-0.00054481	3.5907	0.0015863	2.3575	0.0010415	441.7880163081002	41.793	3.3981	41.755	40.553	43.951	-0.038223					227	85	5	0	0	0	0.5393	10	3348	3133;3145;3157;3169;3181;3193;3205;3218;3230;3348		50.025	2.0566	1	13573000			904	11842	634	635	1128;1129;1130;1131;1132;1133;1134;1135;1136;1137	1137					0.11308733942337312
AIVLTVIPG	9	Unmodified	_AIVLTVIPG_					0	0	0		ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7873229980469	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.39977	6	3282	3065;3101;3113;3125;3174;3282		57.811	7.7867	1	12523000			905	11842	634	635	1138;1139;1140;1141;1142;1143	1143					0.11308733942337312
AIVLTVIPG	9	Unmodified	_AIVLTVIPG_					0	0	0		ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.78765869140625	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.49378	7	2774	2685;2738;2750;2774;2786;2797;2929		52.299	7.7681	1	10128000			906	11842	634	635	1144;1145;1146;1147;1148;1149;1150	1147					0.11308733942337312
AIVLTVIPG	9	Unmodified	_AIVLTVIPG_					0	0	0		ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78778076171875	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.49378	5	2731	2719;2731;2755;2767;2791		52.299	7.7681	1	9571700			907	11842	634	635	1151;1152;1153;1154;1155	1152					0.11308733942337312
AIVLTVIPG	9	Unmodified	_AIVLTVIPG_					0	0	0		ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	ENST00000446965.2_1_5:120022111-120022168:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.787841796875	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.64338	5	2710	2710;2732;2744;2756;2781		44.531	2.0566	1	10215000			908	11842	634	635	1156;1157;1158;1159;1160	1156					0.11308733942337312
AIVMLKRHL	9	Unmodified	_AIVMLKRHL_					0	0	0		nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;ENSG00000070182|ENST00000644917|SPTB	nc|ENSG00000070182|P11277-3|SPTB	nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.8428955078125	2	540.839154	1079.66375	0.51772	0.00028001	4.4062	0.002383	4.9239	0.002663	540.8419138818574	75.086	0.54405	75.042	74.795	75.339	-0.043877					24	14	2	0	0	0	0.77546	1	7391	7391		31.955	0.42505	1	102780			909	1234	635	636	1161	1161					0.12710951867120457
AIVSDIALMI	10	Unmodified	_AIVSDIALMI_					0	0	0			REV__ENST00000505573.2_1_5:19233806-19234037:+|nuORF	REV__ENST00000505573.2_1_5:19233806-19234037:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3040161132812	2	523.301736	1044.58892	1.4247	0.00074556	1.9478	0.0010193	3.3725	0.0017648	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.86763	1	8825	8825		26.693	3.6504	1	3882100	+		910	27884	636	637	1162	1162					0.06840724545190824
AIVSDVLAEP	10	Unmodified	_AIVSDVLAEP_					0	0	0			REV__ENSG00000160993|ENST00000292566|ALKBH4	REV__ENSG00000160993|ENST00000292566|ALKBH4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7994079589844	2	507.279315	1012.54408	-0.47405	-0.00024048	0.1374	6.9699E-05	-0.33665	-0.00017078	507.2786676082525	53.155	0.73403	53.131	52.782	53.516	-0.024387					28	18	2	0	0	0	0.37624	1	4705	4705		47.657	29.333	1	51394	+		911	20754	637	638	1163	1163					0.03830617003529824
AIVSEMVG	8	Unmodified	_AIVSEMVG_					0	0	0			REV__nc|ENSG00000140553|Q9H3U1-2|UNC45A	REV__nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2092590332031	2	403.209847	804.40514	-0.18721	-7.5483E-05	-1.9947	-0.00080429	-2.1819	-0.00087978	403.20895430476565	85.948	2.3712	86.015	85.029	87.4	0.067268					117	54	4	0	0	0	0.86791	1	8608	8608		28.254	2.8041	1	1482400	+		912	19630	638	639	1164	1164					-0.004886241656322454
AIVTPKVLLVL	11	Unmodified	_AIVTPKVLLVL_					0	0	0		ENST00000264144.4_1_1:183177117-183184644:+|nuORF	ENST00000264144.4_1_1:183177117-183184644:+|nuORF	ENST00000264144.4_1_1:183177117-183184644:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.3773803710938	2	583.399567	1164.78458	-2.9226	-0.0017051	1.2618	0.00073613	-1.6608	-0.00096893	583.4007375515932	41.767	0.49021	42.181	41.937	42.427	0.4139					21	12	2	0	0	0	0.17478	1	3644	3644		40.778	12.896	1	464070			913	9475	639	640	1165	1165					0.20878058061543925
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7898254394531	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.69914	4	2793	2793;2818;2836;2889		40.573	4.9683	1	759950	+		914	29875	640	641	1166;1167;1168;1169	1166					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7931213378906	2	456.791861	911.569169	-0.042653	-1.9484E-05	2.8269	0.0012913	2.7842	0.0012718	456.79307389883803	36.432	2.1584	36.413	35.42	37.578	-0.018673					171	47	5	0	0	0	0.69914	1	2343	2343		40.573	3.4135	1	4460800	+		915	29875	640	641	1170	1170					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7921447753906	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.96	1	49.957	49.457	50.457	-0.0030327								0	0	0	0.2969	1	4206	4206		31.955	6.5047	1		+		916	29875	640	641	1171	1171					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7914733886719	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.7932	1	3220	3220		25.45	4.9683	1	652510	+		917	29875	640	641	1172	1172					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7936706542969	2	456.791861	911.569169	-0.77088	-0.00035213	3.6137	0.0016507	2.8428	0.0012986	456.7934149314151	47.886	0.97208	47.859	47.644	48.616	-0.026737					41	25	2	0	0	0	0.7932	1	4015	4015		25.45	1.2474	1	216120	+		918	29875	640	641	1173	1173					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.791259765625	2	456.791861	911.569169	0.097545	4.4558E-05	2.5944	0.0011851	2.6919	0.0012296	456.7929552103287	47.98	1.1453	47.978	47.558	48.703	-0.002449					69	35	4	0	0	0	0.72402	1	3974	3974		38.806	3.6054	1	249160	+		919	29875	640	641	1174	1174					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7908935546875	2	456.791861	911.569169	-1.2485	-0.0005703	3.083	0.0014083	1.8345	0.000838	456.7931433333729	40.143	1.4449	40.149	39.563	41.008	0.0065041					84	46	2	0	0	0	0.72402	1	2478	2478		38.806	6.8513	1	1011500	+		920	29875	640	641	1175	1175					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7931823730469	2	456.791861	911.569169	0.17991	8.2183E-05	2.7362	0.0012499	2.9161	0.001332	456.7930101461281	36.153	2.2506	36.256	35.136	37.386	0.10306					210	68	4	0	0	0	0.7932	1	2018	2018		19.36	1.0356	1	3531000	+		921	29875	640	641	1176	1176					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79156494140625	2	456.791861	911.569169	0.30037	0.00013721	2.5195	0.0011509	2.8199	0.0012881	456.79289757972145	49.9	2.3678	49.942	48.602	50.969	0.04224					107	64	2	0	0	0	0.76996	1	3863	3863		33.516	3.0119	1	208080	+		922	29875	640	641	1177	1177					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7931823730469	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.78058	1	2035	2035		30.504	1.3541	1	3452400	+		923	29875	640	641	1178	1178					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79034423828125	2	456.791861	911.569169	-0.092831	-4.2405E-05	1.6943	0.00077396	1.6015	0.00073156	456.792474958444	41.251	1.138	41.206	40.614	41.752	-0.045471					60	36	2	0	0	0	0.7932	1	2689	2689		25.45	1.2474	1	309120	+		924	29875	640	641	1179	1179					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7933654785156	2	456.791861	911.569169	-0.077665	-3.5477E-05	3.236	0.0014782	3.1584	0.0014427	456.79322700683537	35.356	1.7647	35.603	35.091	36.856	0.24769					159	44	4	0	0	0	0.69914	1	2745	2745		40.573	1.7665	1	6766600	+		925	29875	640	641	1180	1180					0.10984716596760791
AIVTSVPLL	9	Unmodified	_AIVTSVPLL_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.793212890625	2	456.791861	911.569169	1.3225	0.00060413	1.789	0.00081719	3.1115	0.0014213	456.79255750887523	35.219	1.7546	35.6	35.098	36.853	0.3812					157	44	4	0	0	0	0.58151	3	2690	2690;2702;2714		47.916	3.4135	1	7423700	+		926	29875	640	641	1181;1182;1183	1181					0.10984716596760791
AIVTTWMF	8	Unmodified	_AIVTTWMF_					0	0	0		ENSG00000198643|ENST00000358781|FAM3D	ENSG00000198643|ENST00000358781|FAM3D	ENSG00000198643|ENST00000358781|FAM3D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.290771484375	2	484.749139	967.483725	0.27592	0.00013375	-4.1083	-0.0019915	-3.8324	-0.0018578	484.7467891109062	53.44	0.95178	53.854	53.374	54.326	0.4139					50	22	3	0	0	0	0.4196	1	5359	5359		57.453	13.336	1	806830			927	8299	641	642	1184	1184					-0.001317718605491791
AIVTTWMF	8	Unmodified	_AIVTTWMF_					0	0	0		ENSG00000198643|ENST00000358781|FAM3D	ENSG00000198643|ENST00000358781|FAM3D	ENSG00000198643|ENST00000358781|FAM3D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2870788574219	2	484.749139	967.483725	-0.48209	-0.00023369	-3.3118	-0.0016054	-3.7939	-0.0018391	484.7472869419508	53.246	0.95383	53.86	53.324	54.278	0.61436					52	22	3	0	0	0	0.39184	1	5336	5336		74.517	19.012	1	915070			928	8299	641	642	1185	1185					-0.001317718605491791
AIVVSSSVAS	10	Unmodified	_AIVVSSSVAS_					0	0	0		chr1:63478833-63486569|18|19.33|0.1|7.63|-|2|TE_info:Tigger2b_Pri,Tigger2b_Pri_dup34,TcMar-Tigger,DNA,donor,-,63486569,63487327|ITGB3BP,None|13	chr1:63478833-63486569|18|19.33|0.1|7.63|-|2|TE_info:Tigger2b_Pri,Tigger2b_Pri_dup34,TcMar-Tigger,DNA,donor,-,63486569,63487327|ITGB3BP,None|13	chr1:63478833-63486569|18|19.33|0.1|7.63|-|2|TE_info:Tigger2b_Pri,Tigger2b_Pri_dup34,TcMar-Tigger,DNA,donor,-,63486569,63487327|ITGB3BP,None|13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.2595520019531	2	460.258382	918.502212	0.089735	4.1301E-05	-1.0025	-0.00046141	-0.91276	-0.0004201	460.25810884778434	34.386	0.70153	34.596	34.276	34.978	0.21003					31	16	3	0	0	0	0.46422	1	2549	2549		58.782	7.5893	1	561770			929	54	642	643	1186	1186					0.03970061315010298
AIVVSSSVAS	10	Unmodified	_AIVVSSSVAS_					0	0	0		chr1:63478833-63486569|18|19.33|0.1|7.63|-|2|TE_info:Tigger2b_Pri,Tigger2b_Pri_dup34,TcMar-Tigger,DNA,donor,-,63486569,63487327|ITGB3BP,None|13	chr1:63478833-63486569|18|19.33|0.1|7.63|-|2|TE_info:Tigger2b_Pri,Tigger2b_Pri_dup34,TcMar-Tigger,DNA,donor,-,63486569,63487327|ITGB3BP,None|13	chr1:63478833-63486569|18|19.33|0.1|7.63|-|2|TE_info:Tigger2b_Pri,Tigger2b_Pri_dup34,TcMar-Tigger,DNA,donor,-,63486569,63487327|ITGB3BP,None|13	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	460.258382	918.502212	1.0736	0.00049414	-1.3501	-0.0006214	-0.27648	-0.00012725	460.25771559583615	34.401	1.1493	34.706	34.447	35.596	0.30494	0.054956	-5.4137E-05	NaN	58.782	37	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	584210			930	54	642	643							0.03970061315010298
AIVWPVVSR	9	Unmodified	_AIVWPVVSR_					0	0	0		ENSG00000154165|ENST00000284311|GPR15	ENSG00000154165|ENST00000284311|GPR15	ENSG00000154165|ENST00000284311|GPR15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.808837890625	2	513.808377	1025.6022	-0.30203	-0.00015519	1.5478	0.00079525	1.2457	0.00064007	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.78536	1	4219	4219		29.15	2.3535	1	861580			931	5258	643	644	1187	1187					0.09042343439477918
AIVWRLAK	8	Unmodified	_AIVWRLAK_					0	0	0		ENST00000434116.6_1_15:65916409-65944223:+|nuORF;nc|ENSG00000074621|O60721-3|SLC24A1;nc|ENSG00000074621|O60721-2|SLC24A1;ENSG00000074621|ENST00000261892|SLC24A1	ENST00000434116.6_1_15:65916409-65944223:+|nuORF	ENST00000434116.6_1_15:65916409-65944223:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8061218261719	2	478.805637	955.596721	0.18646	8.928E-05	0.43935	0.00021037	0.62582	0.00029964	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.86288	1	2681	2681		26.796	0	1	371600			932	1310	644	645	1188	1188					0.11714664647661266
AIWKVQKA	8	Unmodified	_AIWKVQKA_					0	0	0		ENSG00000060749|ENST00000650167|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1;nc|ENSG00000060749|Q2KHR3-2|QSER1	ENSG00000060749|ENST00000650167|QSER1	ENSG00000060749|ENST00000650167|QSER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2882385253906	2	472.28982	942.565087	-1.7052	-0.00080534	-2.46	-0.0011618	-4.1652	-0.0019672	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.88915	1	12514	12514		35.201	9.7505	1	3080300			933	1069	645	646	1189	1189					0.09150671893701201
AIWRKVTG	8	Unmodified	_AIWRKVTG_					0	0	0			REV__ENSG00000138646|ENST00000264350|HERC5	REV__ENSG00000138646|ENST00000264350|HERC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7776794433594	2	465.779619	929.544686	-1.0371	-0.00048307	-3.4618	-0.0016124	-4.4989	-0.0020955	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.89494	1	7752	7752		37.159	1.5408	1	1384500	+		934	19488	646	647	1190	1190					0.07709501233910032
AIWSRDGLA	9	Unmodified	_AIWSRDGLA_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|170|1|anti-sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|170|1|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.76300048828125	2	494.764166	987.513779	-0.60396	-0.00029882	0.43156	0.00021352	-0.17239	-8.5294E-05	494.76428352990615	52.152	0.59816	52.128	51.902	52.5	-0.023849					21	13	2	0	0	0	0.78058	1	4639	4639		30.504	1.3541	1	153490	+		935	29441	647	648	1191	1191					0.01952303128996391
AIWTARKIVSD	11	Unmodified	_AIWTARKIVSD_					0	0	0		nc|ENSG00000128510|Q9UI42-2|CPA4;ENSG00000128510|ENST00000222482|CPA4	nc|ENSG00000128510|Q9UI42-2|CPA4	nc|ENSG00000128510|Q9UI42-2|CPA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.5752868652344	3	420.575067	1258.70337	0.24832	0.00010444	0.43062	0.00018111	0.67894	0.00028555	420.57514982697614	46.914	0.73291	46.953	46.582	47.315	0.038181					60	19	4	0	0	0	0.74771	1	3481	3481		22.562	0	1	1274000			936	3543	648	649	1192	1192					0.08436750351506817
AIYGRGIAY	9	Unmodified	_AIYGRGIAY_					0	0	0		ENSG00000143643|ENST00000366661|TTC13	ENSG00000143643|ENST00000366661|TTC13	ENSG00000143643|ENST00000366661|TTC13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.27435302734375	2	492.269084	982.523616	-1.3803	-0.0006795	0.56288	0.00027709	-0.81746	-0.00040241	492.26998730389323	48.267	0.92416	48.736	48.27	49.194	0.46941					47	22	3	0	0	0	0.58151	2	4653	4647;4653		47.916	3.7988	1	803530			937	4655	649	650	1193;1194	1194					0.031654911343593994
AIYGTRKFK	9	Unmodified	_AIYGTRKFK_					0	0	0		ENSG00000197629|ENST00000361050|MPEG1	ENSG00000197629|ENST00000361050|MPEG1	ENSG00000197629|ENST00000361050|MPEG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.3195190429688	2	542.319109	1082.62366	-0.40173	-0.00021786	0.1197	6.4918E-05	-0.28202	-0.00015295	542.3190824290646	26	1.0172	25.743	25.424	26.441	-0.2572					62	22	4	0	0	0	0.038282	6	1390	1368;1378;1390;1402;1416;1430		113.41	54.63	1	2215900			938	8184	650	651	1195;1196;1197;1198;1199;1200	1197					0.08565728468170164
AIYGTRKFK	9	Unmodified	_AIYGTRKFK_					0	0	0		ENSG00000197629|ENST00000361050|MPEG1	ENSG00000197629|ENST00000361050|MPEG1	ENSG00000197629|ENST00000361050|MPEG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.3191528320312	2	542.319109	1082.62366	2.1481	0.0011649	-2.5454	-0.0013804	-0.39729	-0.00021546	542.3176764872975	26.019	1.1415	25.588	25.272	26.413	-0.4311					66	25	4	0	0	0	0.065196	4	1404	1382;1392;1404;1416		101.6	46.824	1	2664100			939	8184	650	651	1201;1202;1203;1204	1203					0.08565728468170164
AIYGTRKFK	9	Unmodified	_AIYGTRKFK_					0	0	0		ENSG00000197629|ENST00000361050|MPEG1	ENSG00000197629|ENST00000361050|MPEG1	ENSG00000197629|ENST00000361050|MPEG1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	542.319109	1082.62366	0.16304	8.8421E-05	0.22812	0.00012371	0.39116	0.00021214	542.8196363096965	25.25	0.075233	25.35	25.285	25.361	0.10045	-0.2099	0.0015275	NaN	113.41	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31043			940	8184	650	651							0.08565728468170164
AKAAELLQR	9	Unmodified	_AKAAELLQR_					0	0	0			REV__ENSG00000107854|ENST00000371627|TNKS2	REV__ENSG00000107854|ENST00000371627|TNKS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.7921447753906	2	500.300916	998.587279	-0.7786	-0.00038953	0.97361	0.0004871	0.19501	9.7564E-05	500.30090909459545	32.141	0.38667	32.267	32.116	32.503	0.12643					11	8	2	0	0	0	0.20789	1	2255	2255		13.454	0	1	65656	+		941	17678	651	652	1205	1205					0.08792851571467963
AKAGKGMH	8	Unmodified	_AKAGKGMH_					0	0	0		ENSG00000135413|ENST00000257867|LACRT	ENSG00000135413|ENST00000257867|LACRT	ENSG00000135413|ENST00000257867|LACRT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1961364746094	2	400.215798	798.417042	1.0923	0.00043715	-0.98776	-0.00039532	0.10453	4.1833E-05	400.2151254515469	85.04	0.19417	85.48	85.308	85.502	0.43967					6	4	2	0	0	0	0.4196	1	9901	9901		18.324	1.6194	1	222150			942	4015	652	653	1206	1206					0.00977037368204492
AKAGSGRIG	9	Unmodified	_AKAGSGRIG_					0	0	0			REV__ENSG00000130487|ENST00000648057|KLHDC7B	REV__ENSG00000130487|ENST00000648057|KLHDC7B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.73907470703125	2	408.737951	815.46135	0.14715	6.0146E-05	4.0233	0.0016445	4.1704	0.0017046	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.7932	1	1955	1955		20.947	0	1	1448600	+		943	18877	653	654	1207	1207					0.04623764786049378
AKAHKTPSH	9	Unmodified	_AKAHKTPSH_					0	0	0		ENST00000493240.1_1_10:126234573-126301926:+|nuORF	ENST00000493240.1_1_10:126234573-126301926:+|nuORF	ENST00000493240.1_1_10:126234573-126301926:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.2363586425781	2	488.769783	975.525013	-0.25634	-0.00012529	3.0831	0.0015069	2.8267	0.0013816	488.7710604968921	85.872	0.86259	86.315	85.989	86.852	0.44331					47	20	3	0	0	0	0.20789	1	10076	10076		35.618	7.364	1	694790			944	12721	654	655	1208	1208					0.03627125223135863
AKAISDLAVRR	11	Unmodified	_AKAISDLAVRR_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.58062744140625	3	400.578811	1198.7146	3.1805	0.001274	0.74448	0.00029822	3.925	0.0015723	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.75779	1	12433	12433		20.315	0.28454	1	4827300			945	1550	655	656	1209	1209					0.12319572445630911
AKALTRGILHQ	11	Unmodified	_AKALTRGILHQ_					0	0	0		ENSG00000165526|ENST00000298317|RPUSD4;nc|ENSG00000165526|Q96CM3-2|RPUSD4	ENSG00000165526|ENST00000298317|RPUSD4	ENSG00000165526|ENST00000298317|RPUSD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3675537109375	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.72739	1	12746	12746		27.047	2.5281	1	3346600			946	6092	656	657	1210	1210					0.12459876308275852
AKALTRGILHQ	11	Unmodified	_AKALTRGILHQ_					0	0	0		ENSG00000165526|ENST00000298317|RPUSD4;nc|ENSG00000165526|Q96CM3-2|RPUSD4	ENSG00000165526|ENST00000298317|RPUSD4	ENSG00000165526|ENST00000298317|RPUSD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3666381835938	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.72106	1	12712	12712		28.081	17.816	1	5984800			947	6092	656	657	1211	1211					0.12459876308275852
AKAVAGNPRG	10	Unmodified	_AKAVAGNPRG_					0	0	0			REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7687683105469	2	470.769783	939.525013	-0.46989	-0.00022121	-1.5944	-0.00075061	-2.0643	-0.00097182	470.768898093518	52.94	1.6168	52.866	52.471	54.088	-0.074509					101	42	3	0	0	0	0.80179	1	4402	4402		39.253	2.8061	1	1875900	+		948	18338	657	658	1212	1212					0.052831252231385406
AKAVHTIPVL	10	Unmodified	_AKAVHTIPVL_					0	0	0			REV__ENSG00000125508|ENST00000217188|SRMS	REV__ENSG00000125508|ENST00000217188|SRMS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.82666015625	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.85934	1	10079	10079		35.618	0.41757	1	15330000	+		949	18649	658	659	1213	1213					0.12214899127980061
AKCARVNTKL	10	Carbamidomethyl (C)	_AKC(Carbamidomethyl (C))ARVNTKL_	AKC(1)ARVNTKL		AKC(99)ARVNTKL		0	1	0			REV__ENST00000428210.5_1_2:61705957-61719950:-|nuORF	REV__ENST00000428210.5_1_2:61705957-61719950:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8299560546875	2	580.832057	1159.64956	-1.9881	-0.0011547	-0.75427	-0.00043811	-2.7423	-0.0015928	580.8312794976786	59.527	0.91995	59.918	59.525	60.445	0.39077					48	22	3	0	0	0	0.12096	1	6301	6301		98.629	13.469	1	1069200	+		950	16844	659	660	1214	1214	224				0.0761225464814288
AKDKRPFLS	9	Unmodified	_AKDKRPFLS_					0	0	0		ENSG00000103888|ENST00000394685|CEMIP;nc|ENSG00000103888|Q8WUJ3-2|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.3088989257812	2	531.308741	1060.60293	0.10067	5.3487E-05	-0.038657	-2.0539E-05	0.062014	3.2948E-05	531.3084544257347	37.315	0.78786	37.291	36.949	37.737	-0.023975					33	17	3	0	0	0	0.38563	1	2461	2461		58.782	3.2778	1	132470			951	2104	660	661	1215	1215					0.07505138088527019
AKEKEKKKLK	10	Unmodified	_AKEKEKKKLK_					0	0	0			REV__nc|ENSG00000146067|Q96PV7-2|FAM193B	REV__nc|ENSG00000146067|Q96PV7-2|FAM193B	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.4038696289062	2	615.40063	1228.78671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.513	1	23.566	23.066	24.066	0.05291								0	0	0	0.45132	1	752	752		22.58	1.6327	1		+		952	27953	661	662	1216	1216					0.18146486799355444
AKELVRQLKE	10	Unmodified	_AKELVRQLKE_					0	0	0			REV__ENSG00000143653|ENST00000366510|SCCPDH	REV__ENSG00000143653|ENST00000366510|SCCPDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.24847412109375	3	405.24695	1212.71902	1.65	0.00066868	-1.1207	-0.00045416	0.52934	0.00021451	405.24639893952656	23.489	3.066	23.108	22.404	25.47	-0.38178					149	70	4	0	0	0	0.76747	1	1099	1099		41.08	5.9018	1	247320	+		953	19831	662	663	1217	1217					0.12117036868517062
AKELVRQLKE	10	Unmodified	_AKELVRQLKE_					0	0	0			REV__ENSG00000143653|ENST00000366510|SCCPDH	REV__ENSG00000143653|ENST00000366510|SCCPDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.2486877441406	3	405.24695	1212.71902	1.0635	0.00043097	-0.64433	-0.00026111	0.41915	0.00016986	405.2465768037405	23.434	2.4302	22.86	22.409	24.839	-0.57415					118	56	3	0	0	0	0.46607	2	1103	1103;1120		58.63	5.0327	1	383090	+		954	19831	662	663	1218;1219	1218					0.12117036868517062
AKERLGRRRPT	11	Unmodified	_AKERLGRRRPT_					0	0	0			REV__nc|ENSG00000204644|Q9NU63|ZFP57	REV__nc|ENSG00000204644|Q9NU63|ZFP57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2729797363281	3	447.272493	1338.79565	-1.2893	-0.00057667	1.9554	0.00087461	0.66613	0.00029794	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.71921	1	11467	11467		28.384	5.8222	1	31263000	+		955	23514	663	664	1220	1220					0.1398027320840356
AKERLGRRRPT	11	Unmodified	_AKERLGRRRPT_					0	0	0			REV__nc|ENSG00000204644|Q9NU63|ZFP57	REV__nc|ENSG00000204644|Q9NU63|ZFP57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.2729797363281	3	447.272493	1338.79565	0.74994	0.00033543	0.056335	2.5197E-05	0.80627	0.00036062	447.27246467576646	106.88	1.1653	106.97	106.51	107.68	0.091255					134	27	6	0	0	0	0.75294	1	11507	11507		21.395	2.1326	1	19906000	+		956	23514	663	664	1221	1221					0.1398027320840356
AKESEKPED	9	Unmodified	_AKESEKPED_					0	0	0			REV__nc|ENSG00000116701|P19878-3|NCF2	REV__nc|ENSG00000116701|P19878-3|NCF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7470092773438	2	516.745836	1031.47712	-0.049244	-2.5447E-05	3.2807	0.0016953	3.2315	0.0016699	516.747458427901	65.403	0.59649	65.407	65.023	65.62	0.0046997					55	25	3	0	0	0	0.51592	1	6145	6145		51.193	14.034	1	327470	+		957	18215	664	665	1222	1222					-0.03736038278225351
AKESEKPED	9	Unmodified	_AKESEKPED_					0	0	0			REV__nc|ENSG00000116701|P19878-3|NCF2	REV__nc|ENSG00000116701|P19878-3|NCF2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	516.745836	1031.47712	-0.049244	-2.5447E-05	3.2807	0.0016953	3.2315	0.0016699	516.747458427901	65.403	0.59649	65.407	65.023	65.62	0.0046997	0.12049	-0.0003401	NaN	51.193	55	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	327470	+		958	18215	664	665							-0.03736038278225351
AKESEKPED	9	Unmodified	_AKESEKPED_					0	0	0			REV__nc|ENSG00000116701|P19878-3|NCF2	REV__nc|ENSG00000116701|P19878-3|NCF2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	516.745836	1031.47712	-0.62916	-0.00032512	4.136	0.0021373	3.5069	0.0018122	516.7478941673756	65.22	0.5148	65.247	64.92	65.435	0.027138	-0.040127	0.00054383	NaN	51.193	56	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	442420	+		959	18215	664	665							-0.03736038278225351
AKFVILRN	8	Unmodified	_AKFVILRN_					0	0	0		ENST00000538878.5_1_Y:15591656-15591815:-|nuORF	ENST00000538878.5_1_Y:15591656-15591815:-|nuORF	ENST00000538878.5_1_Y:15591656-15591815:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.80108642578125	2	480.803094	959.591636	-0.87555	-0.00042097	-3.3204	-0.0015965	-4.1959	-0.0020174	480.80141229635706	99.415	2.4533	99.415	98.234	100.69	0					106	59	2	0	0	0	0.85277	1	9922	9922		25.45	4.9683	1	116320			960	13474	665	666	1223	1223					0.1102236078503438
AKGCEERKYPK	11	Unmodified	_AKGCEERKYPK_					0	0	0			REV__ENSG00000196350|ENST00000601693|ZNF729	REV__ENSG00000196350|ENST00000601693|ZNF729	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2662658691406	3	436.895812	1307.66561	-0.14884	-6.5027E-05	-2.2575	-0.0009863	-2.4064	-0.0010513	436.8949432480778	26.1	0.48397	25.843	25.594	26.078	-0.25721					19	10	2	0	0	0	0.17289	1	1427	1427		11.932	0	1	59081	+		961	23117	666	667	1224	1224					0.024079160943756506
AKGCEHCQHGK	11	Unmodified	_AKGCEHCQHGK_					0	0	0			REV__nc|ENSG00000197062|Q16670-2|ZSCAN26	REV__nc|ENSG00000197062|Q16670-2|ZSCAN26	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.293701171875	2	599.266224	1196.5179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.767	1	75.893	75.393	76.393	0.12545								0	0	0	0.56276	1	7061	7061		28.081	3.5623	1		+		962	23191	667	668	1225	1225					-0.0725029871125571
AKGIVFGRF	9	Unmodified	_AKGIVFGRF_					0	0	0		ENSG00000136643|ENST00000366960|RPS6KC1;nc|ENSG00000136643|Q96S38-2|RPS6KC1;ENST00000490299.5_1_1:213246316-213302929:+|nuORF	ENSG00000136643|ENST00000366960|RPS6KC1	ENSG00000136643|ENST00000366960|RPS6KC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.7955627441406	2	497.795269	993.575986	-1.5279	-0.00076056	2.6004	0.0012945	1.0726	0.00053392	497.79634722185193	48.476	0.80991	48.476	47.85	48.66	0					53	20	3	0	0	0	0.78058	1	3762	3762		30.504	2.2494	1	518630			963	4125	668	669	1226	1226					0.0789407426799471
AKGKKKKR	8	Unmodified	_AKGKKKKR_					0	0	0			REV__ENST00000551293.1_1_12:48095240-48099773:-|nuORF	REV__ENST00000551293.1_1_12:48095240-48099773:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2875671386719	2	472.329811	942.645068	0.72455	0.00034223	-2.8219	-0.0013329	-2.0973	-0.00099064	472.3278051965327	95.107	0.48383	95.27	94.949	95.433	0.16307					20	11	3	0	0	0	0.4196	1	9709	9709		4.3163	2.8514	1	162330	+		964	16077	669	670	1227	1227					0.17145158287553386
AKGKVKAK	8	Unmodified	_AKGKVKAK_					0	0	0		nc|ENSG00000135766|Q9GZT9-2|EGLN1;ENSG00000135766|ENST00000366641|EGLN1	nc|ENSG00000135766|Q9GZT9-2|EGLN1	nc|ENSG00000135766|Q9GZT9-2|EGLN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2844543457031	2	415.284537	828.554522	1.087	0.00045141	-0.58773	-0.00024408	0.49926	0.00020734	415.2841453704299	25.009	1.2305	24.681	24.206	25.437	-0.32825					58	27	4	0	0	0	0.92457	2	1241	1241;1253		47.916	7.343	1	1240100			965	4052	670	671	1228;1229	1228					0.1333868923927639
AKGKVKAK	8	Unmodified	_AKGKVKAK_					0	0	0		nc|ENSG00000135766|Q9GZT9-2|EGLN1;ENSG00000135766|ENST00000366641|EGLN1	nc|ENSG00000135766|Q9GZT9-2|EGLN1	nc|ENSG00000135766|Q9GZT9-2|EGLN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.2845764160156	2	415.284537	828.554522	2.201	0.00091406	-1.7222	-0.00071522	0.4788	0.00019884	415.28367513035636	24.933	1.0561	24.419	24.012	25.068	-0.51365					60	23	4	0	0	0	0.87922	2	1237	1237;1261		40.573	5.1588	1	1062000			966	4052	670	671	1230;1231	1230					0.1333868923927639
AKGLWYITV	9	Unmodified	_AKGLWYITV_					0	0	0			REV__nc|ENSG00000064042|Q9UPQ0-10|LIMCH1	REV__nc|ENSG00000064042|Q9UPQ0-10|LIMCH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7822265625	2	525.80276	1049.59097	-0.88207	-0.00046379	3.9298	0.0020663	3.0478	0.0016025	525.8027957744852	47.14	0.32747	48.063	47.871	48.199	0.92315					8	7	2	0	0	0	0.20789	1	4501	4501		30.504	6.3009	1	1059100	+		967	29699	671	672	1232	1232					0.06815521345311026
AKGLYDKKAL	10	Unmodified	_AKGLYDKKAL_					0	0	0			REV__nc|ENSG00000116701|P19878-3|NCF2	REV__nc|ENSG00000116701|P19878-3|NCF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8302612304688	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.8545	1	9107	9107		36.447	1.2947	1	6402500	+		968	18215	672	673	1233	1233					0.10094577919812764
AKGPHPPL	8	Unmodified	_AKGPHPPL_					0	0	0			REV__ENST00000450689.6_1_7:86594326-86688941:-|nuORF	REV__ENST00000450689.6_1_7:86594326-86688941:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.7398986816406	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.80706	1	2000	2000		19.36	0	1	1364200	+		969	26871	673	674	1234	1234					0.05025854279756459
AKGRVAIAGG	10	Unmodified	_AKGRVAIAGG_					0	0	0		nc|ENSG00000164007|Q8N6F1-2|CLDN19;nc|ENSG00000164007|Q8N6F1-3|CLDN19;ENSG00000164007|ENST00000296387|CLDN19	nc|ENSG00000164007|Q8N6F1-2|CLDN19	nc|ENSG00000164007|Q8N6F1-2|CLDN19	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27459716796875	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.03	1	113	112.5	113.5	-0.024811								0	0	0	0.45132	1	12500	12500		37.159	0.13063	1				970	5898	674	675	1235	1235					0.08152313228515595
AKGRVAIAGG	10	Unmodified	_AKGRVAIAGG_					0	0	0		nc|ENSG00000164007|Q8N6F1-2|CLDN19;nc|ENSG00000164007|Q8N6F1-3|CLDN19;ENSG00000164007|ENST00000296387|CLDN19	nc|ENSG00000164007|Q8N6F1-2|CLDN19	nc|ENSG00000164007|Q8N6F1-2|CLDN19	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2739562988281	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.08	1	114.06	113.56	114.56	-0.024452								0	0	0	0.45132	1	12632	12632		37.159	3.6435	1				971	5898	674	675	1236	1236					0.08152313228515595
AKGRVAIAGG	10	Unmodified	_AKGRVAIAGG_					0	0	0		nc|ENSG00000164007|Q8N6F1-2|CLDN19;nc|ENSG00000164007|Q8N6F1-3|CLDN19;ENSG00000164007|ENST00000296387|CLDN19	nc|ENSG00000164007|Q8N6F1-2|CLDN19	nc|ENSG00000164007|Q8N6F1-2|CLDN19	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2740478515625	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.5	1	113.52	113.02	114.02	0.027321								0	0	0	0.45132	1	12403	12403		21.96	1.4781	1				972	5898	674	675	1237	1237					0.08152313228515595
AKGTHRGCP	9	Unmodified	_AKGTHRGCP_					0	0	0		nc|ENSG00000145901|Q15025-7|TNIP1	nc|ENSG00000145901|Q15025-7|TNIP1	nc|ENSG00000145901|Q15025-7|TNIP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2128601074219	2	463.734886	925.455219	0.10671	4.9486E-05	-4.0416	-0.0018742	-3.9349	-0.0018247	463.73265789079255	24.128	0.43873	23.746	23.533	23.972	-0.38178					15	9	2	0	0	0	0.20789	1	1124	1124		10.866	4.9445	1	57544			973	14975	675	676	1238	1238					-0.010490767171290827
AKHFARVAEWG	11	Unmodified	_AKHFARVAEWG_					0	0	0			REV__nc|ENSG00000144488|Q6ZVH7-2|ESPNL	REV__nc|ENSG00000144488|Q6ZVH7-2|ESPNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.5608825683594	3	424.55964	1270.65709	1.4537	0.00061718	1.1204	0.00047566	2.5741	0.0010928	424.5601606035987	27.607	1.8639	27.352	26.945	28.809	-0.25465					132	44	5	0	0	0	0.71207	1	1612	1612		29.551	1.6685	1	5946800	+		974	19895	676	677	1239	1239					0.03258730240077057
AKHGGNRGG	9	Unmodified	_AKHGGNRGG_					0	0	0			REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.22344970703125	2	427.223	852.431447	4.6941	0.0020054	-1.3658	-0.00058349	3.3283	0.0014219	427.22234508293917	107.01	0.5659	107.16	106.87	107.43	0.14929					27	16	2	0	0	0	0.7932	1	13078	13078		18.324	0	1	571370	+		975	24265	677	678	1240	1240					-0.000671741592896069
AKHGGNRGG	9	Unmodified	_AKHGGNRGG_					0	0	0			REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	427.223	852.431447	2.6911	0.0011497	0.064713	2.7647E-05	2.7558	0.0011773	427.22306029742884	107.1	0.53493	107.14	106.85	107.39	0.035622	-0.016989	-0.001405	NaN	18.324	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81761	+		976	24265	677	678							-0.000671741592896069
AKHGGNRGG	9	Unmodified	_AKHGGNRGG_					0	0	0			REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	427.223	852.431447	-1.6647	-0.00071119	4.2494	0.0018155	2.5848	0.0011043	427.2247093208211	106.97	0.50056	107.11	106.9	107.4	0.13866	-0.044967	0.0021706	NaN	18.324	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	343920	+		977	24265	677	678							-0.000671741592896069
AKHGGNRGG	9	Unmodified	_AKHGGNRGG_					0	0	0			REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	427.223	852.431447	0.73394	0.00031356	1.8419	0.0007869	2.5758	0.0011005	427.2235930177061	107.07	0.50834	107.16	106.91	107.42	0.091255	0.0028198	0.00011349	NaN	18.324	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	148110	+		978	24265	677	678							-0.000671741592896069
AKHGGNRGG	9	Unmodified	_AKHGGNRGG_					0	0	0			REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	427.223	852.431447	-1.8541	-0.00079213	4.4071	0.0018828	2.5529	0.0010907	427.22476941948077	107.18	0.60402	107.22	106.81	107.41	0.036125	0.06496	0.0023053	NaN	18.324	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	158240	+		979	24265	677	678							-0.000671741592896069
AKHGGNRGG	9	Unmodified	_AKHGGNRGG_					0	0	0			REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	REV__ENST00000247161.7_1_X:47495087-47495183:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	427.223	852.431447	4.6941	0.0020054	-1.3658	-0.00058349	3.3283	0.0014219	427.22234508293917	107.01	0.5659	107.16	106.87	107.43	0.14929	0.0028705	-0.0026273	NaN	18.324	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	571370	+		980	24265	677	678							-0.000671741592896069
AKHIKILTRDG	11	Unmodified	_AKHIKILTRDG_					0	0	0		nc|ENSG00000134215|Q9UKW4-2|VAV3;ENST00000343258.8_1_1:108115955-108328118:-|nuORF;ENSG00000134215|ENST00000370056|VAV3;nc|ENSG00000134215|Q9UKW4-4|VAV3;nc|ENSG00000134215|Q9UKW4-3|VAV3;ENST00000525460.5_1_1:108115955-108220600:-|nuORF	nc|ENSG00000134215|Q9UKW4-2|VAV3	nc|ENSG00000134215|Q9UKW4-2|VAV3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.37890625	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.61	1	115.54	115.04	116.04	-0.069672								0	0	0	0.56276	1	12397	12397		28.081	8.978	1				981	3917	678	679	1241	1241					0.13056145479708903
AKHKGPPV	8	Unmodified	_AKHKGPPV_					0	0	0		nc|ENSG00000185813|Q99447-3|PCYT2;nc|ENSG00000185813|Q99447-4|PCYT2;ENSG00000185813|ENST00000538936|PCYT2	nc|ENSG00000185813|Q99447-3|PCYT2	nc|ENSG00000185813|Q99447-3|PCYT2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	416.737060546875	2	417.253237	832.491922	-1.9314	-0.0008059	1.3055	0.00054472	-0.62595	-0.00026118	417.25369919165763	36.393	1.3872	36.393	36.008	37.395	0					50	31	2	0	0	0	0.4196	1	2072	2072		13.775	4.953	1	91236			982	15156	679	680	1242	1242					0.06897543171089637
AKHLRKLK	8	Unmodified	_AKHLRKLK_					0	0	0			REV__ENSG00000173269|ENST00000372027|MMRN2	REV__ENSG00000173269|ENST00000372027|MMRN2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.8385009765625	2	497.337636	992.660718	-0.33878	-0.00016849	-0.22909	-0.00011393	-0.56787	-0.00028242	497.33721513240033	74.236	0.87539	74.192	73.986	74.862	-0.043877					46	30	2	0	0	0	0.4196	1	7355	7355		12.959	0.75233	1	88485	+		983	21912	680	681	1243	1243					0.16409444804594386
AKHQWILL	8	Unmodified	_AKHQWILL_					0	0	0			REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.7677001953125	2	504.803094	1007.59164	0.51976	0.00026238	-4.0485	-0.0020437	-3.5287	-0.0017813	505.30258053311127	22.255	0.49808	21.825	21.554	22.052	-0.42922					13	10	2	0	0	0	0.4196	1	877	877		3.9852	0	1	81828	+		984	18735	681	682	1244	1244					0.08814360785038389
AKHYKIAKSA	10	Unmodified	_AKHYKIAKSA_					0	0	0			REV__MER11B_dup109|chr4:246912-248001:-|1.1537234201781927|0.0844565193760445|3.77|63.0|45|1|anti-sense	REV__MER11B_dup109|chr4:246912-248001:-|1.1537234201781927|0.0844565193760445|3.77|63.0|45|1|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.8279418945312	2	558.82984	1115.64513	0.050658	2.8309E-05	-4.1328	-0.0023095	-4.0822	-0.0022812	558.827346664337	65.575	0.73492	65.54	65.252	65.986	-0.034798					94	39	3	0	0	0	0.86348	1	6295	6295		31.53	3.6476	1	4755700	+		985	29642	682	683	1245	1245					0.09193113496894512
AKIKPLAPPSA	11	Unmodified	_AKIKPLAPPSA_					0	0	0			REV__nc|ENSG00000116731|Q13029-5|PRDM2	REV__nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8399047851562	2	546.842416	1091.67028	-0.49529	-0.00027085	-3.9856	-0.0021795	-4.4809	-0.0024504	546.8402497724348	101.28	3.7061	101.28	100.69	104.39	0					228	91	5	0	0	0	0.58425	2	10299	10299;10335		45.972	6.7194	1	22090000	+		986	18220	683	684	1246;1247	1246					0.12811168299458586
AKIKPLAPPSA	11	Unmodified	_AKIKPLAPPSA_					0	0	0			REV__nc|ENSG00000116731|Q13029-5|PRDM2	REV__nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8399047851562	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.60058	3	10549	10477;10501;10549		44.377	7.723	1	44929000	+		987	18220	683	684	1248;1249;1250	1250					0.12811168299458586
AKIRAKIPK	9	Unmodified	_AKIRAKIPK_					0	0	0			REV__ENSG00000107929|ENST00000316157|LARP4B	REV__ENSG00000107929|ENST00000316157|LARP4B	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.8533325195312	2	512.853119	1023.69168	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.974	1	23.974	23.474	24.474	0								0	0	0	0.34024	1	787	787		17.365	4.4058	1		+		988	17682	684	685	1251	1251					0.18078598118847822
AKITYLSPE	9	Unmodified	_AKITYLSPE_					0	0	0			REV__ENSG00000005243|ENST00000621465|COPZ2	REV__ENSG00000005243|ENST00000621465|COPZ2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2920837402344	2	511.281857	1020.54916	0.29002	0.00014828	0.099044	5.0639E-05	0.38906	0.00019892	511.281786918233	53.122	0.74469	53.737	53.408	54.152	0.61436					37	17	3	0	0	0	0.20789	1	5376	5376		42.396	9.5837	1	410300	+		989	16082	685	686	1252	1252					0.03970920866140659
AKKAALSSV	9	Unmodified	_AKKAALSSV_					0	0	0		nc|ENSG00000118263|O75840-3|KLF7;nc|ENSG00000118263|O75840-2|KLF7;nc|ENSG00000118263|O75840-4|KLF7;ENSG00000118263|ENST00000309446|KLF7	nc|ENSG00000118263|O75840-3|KLF7	nc|ENSG00000118263|O75840-3|KLF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77117919921875	2	437.77146	873.528367	-0.10723	-4.6943E-05	-0.31102	-0.00013615	-0.41825	-0.0001831	437.7713100510169	39.948	1.5972	39.9	38.972	40.569	-0.04789					99	48	4	0	0	0	0.7932	1	2504	2504		25.574	9.9322	1	3032300			990	14866	686	687	1253	1253					0.0865437527713766
AKKAALSSV	9	Unmodified	_AKKAALSSV_					0	0	0		nc|ENSG00000118263|O75840-3|KLF7;nc|ENSG00000118263|O75840-2|KLF7;nc|ENSG00000118263|O75840-4|KLF7;ENSG00000118263|ENST00000309446|KLF7	nc|ENSG00000118263|O75840-3|KLF7	nc|ENSG00000118263|O75840-3|KLF7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713317871094	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.7932	1	2899	2899		15.642	2.6826	1	13476000			991	14866	686	687	1254	1254					0.0865437527713766
AKKAKRQWRAP	11	Unmodified	_AKKAKRQWRAP_					0	0	0			REV__ENST00000488829.1_1_9:89626569-89628063:+|nuORF	REV__ENST00000488829.1_1_9:89626569-89628063:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.2732238769531	3	447.273834	1338.79967	-1.7854	-0.00079855	-0.32406	-0.00014494	-2.1094	-0.00094349	447.27362843006824	106.96	1.1721	107.02	106.47	107.64	0.053757					124	27	6	0	0	0	0.76892	1	11445	11445		17.833	0	1	15545000	+		992	27605	687	688	1255	1255					0.1438236270212201
AKKASIVLAYT	11	Unmodified	_AKKASIVLAYT_					0	0	0			REV__ENST00000422086.5_2_22:21362941-21363382:-|nuORF	REV__ENST00000422086.5_2_22:21362941-21363382:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.85498046875	2	582.852981	1163.69141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.98	1	112.95	112.45	113.45	-0.024811								0	0	0	0.56276	1	12494	12494		25.574	0	1		+		993	26504	688	689	1256	1256					0.11611133608289492
AKKCEKCQY	9	2 Carbamidomethyl (C)	_AKKC(Carbamidomethyl (C))EKC(Carbamidomethyl (C))QY_	AKKC(1)EKC(1)QY		AKKC(66)EKC(66)QY		0	2	0			REV__ENST00000585612.1_1_19:56934624-56945194:+|nuORF	REV__ENST00000585612.1_1_19:56934624-56945194:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	607.787353515625	2	607.786458	1213.55836	-0.38599	-0.0002346	3.0727	0.0018675	2.6867	0.0016329	607.7881557256275	54.021	0.70257	54.015	53.685	54.388	-0.0053673					47	21	3	0	0	0	0.28163	1	4736	4736		66.429	9.7082	1	445300	+		994	23326	689	690	1257	1257	283;284				-0.03987377111479873
AKKEKRNLRP	10	Unmodified	_AKKEKRNLRP_					0	0	0			REV__ENST00000422983.1_1_1:53038862-53039237:+|nuORF	REV__ENST00000422983.1_1_1:53038862-53039237:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	620.3904418945312	2	620.385845	1238.75714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.829	1	78.924	78.424	79.424	0.0942								0	0	0	0.45132	1	7416	7416		19.997	0	1		+		995	26506	690	691	1258	1258					0.1473096757388248
AKKGGRIAND	10	Unmodified	_AKKGGRIAND_					0	0	0			REV__ENSG00000111642|ENST00000544040|CHD4	REV__ENSG00000111642|ENST00000544040|CHD4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3138427734375	2	515.293622	1028.57269	1.0112	0.00052106	2.4748	0.0012753	3.486	0.0017963	515.293290003666	22.717	0.5733	22.298	21.97	22.544	-0.41879					16	12	2	0	0	0	0.37624	1	941	941		42.864	7.246	1	42635	+		996	17878	691	692	1259	1259					0.05954779423313994
AKKGLKKP	8	Unmodified	_AKKGLKKP_					0	0	0		nc|ENSG00000147799|Q9C0H5|ARHGAP39;ENSG00000147799|ENST00000377307|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30023193359375	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.79929	2	7607	7607;8173		18.324	6.1176	1	6323600			997	4923	692	693	1260;1261	1260					0.14627262273359065
AKKIDEPVKSA	11	Unmodified	_AKKIDEPVKSA_					0	0	0			REV__ENST00000434827.1_1_22:25745816-25746155:-|nuORF	REV__ENST00000434827.1_1_22:25745816-25746155:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	593.3446044921875	2	593.34552	1184.67649	-0.22642	-0.00013434	-1.2506	-0.00074204	-1.477	-0.00087638	593.3446713104415	103.73	2.3003	103.73	103.29	105.59	0					144	55	4	0	0	0	0.73621	1	10647	10647		25.126	3.1661	1	1751500	+		998	26670	693	694	1262	1262					0.09153641740317653
AKKILHLRSGE	11	Unmodified	_AKKILHLRSGE_					0	0	0		ENST00000479644.1_1_6:31940861-31940969:+|nuORF	ENST00000479644.1_1_6:31940861-31940969:+|nuORF	ENST00000479644.1_1_6:31940861-31940969:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3826293945312	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.58	1	118.56	118.06	119.06	-0.024208								0	0	0	0.56276	1	13137	13137		13.454	4.7603	1				999	12413	694	695	1263	1263					0.13056145479708903
AKKILHLRSGE	11	Unmodified	_AKKILHLRSGE_					0	0	0		ENST00000479644.1_1_6:31940861-31940969:+|nuORF	ENST00000479644.1_1_6:31940861-31940969:+|nuORF	ENST00000479644.1_1_6:31940861-31940969:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.8881225585938	2	626.380229	1250.7459	-1.2036	-0.0007539	3.0309	0.0018985	1.8273	0.0011446	626.382725526021	108.36	0.29773	108.38	108.2	108.5	0.020561					14	11	2	0	0	0	0.75906	1	11576	11576		20.03	1.7684	1	419060			1000	12413	694	695	1264	1264					0.13056145479708903
AKKILHLRSGE	11	Unmodified	_AKKILHLRSGE_					0	0	0		ENST00000479644.1_1_6:31940861-31940969:+|nuORF	ENST00000479644.1_1_6:31940861-31940969:+|nuORF	ENST00000479644.1_1_6:31940861-31940969:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3807983398438	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.44	1	114.39	113.89	114.89	-0.05722								0	0	0	0.56276	1	12240	12240		36.447	2.2742	1				1001	12413	694	695	1265	1265					0.13056145479708903
AKKILHLRSGE	11	Unmodified	_AKKILHLRSGE_					0	0	0		ENST00000479644.1_1_6:31940861-31940969:+|nuORF	ENST00000479644.1_1_6:31940861-31940969:+|nuORF	ENST00000479644.1_1_6:31940861-31940969:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3805541992188	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.64	1	114.59	114.09	115.09	-0.05722								0	0	0	0.56276	1	12267	12267		35.152	10.026	1				1002	12413	694	695	1266	1266					0.13056145479708903
AKKIMQFLSSL	11	Unmodified	_AKKIMQFLSSL_					0	0	0		ENSG00000266714|ENST00000645453|MYO15B;ENST00000584516.5_1_17:73587014-73591049:+|nuORF	ENSG00000266714|ENST00000645453|MYO15B	ENSG00000266714|ENST00000645453|MYO15B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.58154296875	3	422.581053	1264.72133	-1.733	-0.00073233	3.9229	0.0016577	2.1899	0.00092541	422.5826240153895	97.352	3.8291	97.583	96.825	100.65	0.23103					216	89	4	0	0	0	0.74763	1	10051	10051		25.892	11.198	1	506650			1003	8953	695	696	1267	1267					0.09955749282016768
AKKLGPIFTS	10	Unmodified	_AKKLGPIFTS_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.3189086914062	2	531.321317	1060.62808	-0.033063	-1.7567E-05	-3.6466	-0.0019375	-3.6797	-0.0019551	531.3191547732448	95.172	2.5483	95.24	94.714	97.262	0.068336					181	59	5	0	0	0	0.86589	1	9981	9981		29.15	6.5699	1	3878900	+		1004	17333	696	697	1268	1268					0.10019192891104467
AKKLGPIFTS	10	Unmodified	_AKKLGPIFTS_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.3189086914062	2	531.321317	1060.62808	-1.5129	-0.00080386	-2.153	-0.0011439	-3.6659	-0.0019478	531.3198552399973	94.964	2.533	95.167	94.65	97.183	0.20242					171	59	5	0	0	0	0.86763	1	9702	9702		26.693	1.2427	1	2353400	+		1005	17333	696	697	1269	1269					0.10019192891104467
AKKLKKSAGT	10	Unmodified	_AKKLKKSAGT_					0	0	0			REV__ENSG00000124610|ENST00000244573|H1-1	REV__ENSG00000124610|ENST00000244573|H1-1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.313720703125	2	516.332216	1030.64988	-0.2582	-0.00013332	0.17018	8.7867E-05	-0.088023	-4.5449E-05	516.3318248208457	99.354	0.83423	99.577	99.287	100.12	0.22263					32	19	3	0	0	0	0.37624	1	10394	10394		37.812	9.73	1	322460	+		1006	18601	697	698	1270	1270					0.13577997639663408
AKKLLLEKYK	10	Unmodified	_AKKLLLEKYK_					0	0	0		ENST00000561636.2_1_15:43423309-43423531:+|nuORF	ENST00000561636.2_1_15:43423309-43423531:+|nuORF	ENST00000561636.2_1_15:43423309-43423531:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	617.4006958007812	2	617.400099	1232.78564	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.699	1	15.757	15.257	16.257	0.057872								0	0	0	0.45132	1	64	64		15.642	0.77694	1				1007	13839	698	699	1271	1271					0.17856272430458375
AKKLYTVLSP	10	Unmodified	_AKKLYTVLSP_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3399047851562	2	560.342249	1118.66995	-1.4184	-0.00079481	-2.3281	-0.0013045	-3.7465	-0.0020993	560.3408991920513	102.18	3.487	102.32	101.71	105.2	0.13569					387	86	7	0	0	0	0.80179	1	11079	11079		39.253	5.0803	1	120110000	+		1008	20385;29943	699	700	1272	1272					0.11535748579603933
AKKNPKIPM	9	Unmodified	_AKKNPKIPM_					0	0	0		nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170004|Q12873-2|CHD3;ENSG00000170004|ENST00000330494|CHD3;ENSG00000116254|ENST00000262450|CHD5	nc|ENSG00000170004|Q12873-3|CHD3;ENSG00000116254|ENST00000262450|CHD5	nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8087768554688	2	513.810062	1025.60557	0.37872	0.00019459	-2.5289	-0.0012994	-2.1502	-0.0011048	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.7932	1	4238	4238		24.203	1.1603	1	971720			1009	15087;2911	700	701	1273	1273					0.09379270221802471
AKKPVRSMIET	11	Unmodified	_AKKPVRSMIET_					0	0	0		nc|ENSG00000182934|P08240-2|SRPRA;ENSG00000182934|ENST00000332118|SRPRA	nc|ENSG00000182934|P08240-2|SRPRA	nc|ENSG00000182934|P08240-2|SRPRA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.5751953125	3	420.57619	1258.70674	-0.87871	-0.00036957	-0.95036	-0.0003997	-1.8291	-0.00076927	420.57568384090274	46.88	0.74535	46.852	46.55	47.295	-0.027752					51	18	4	0	0	0	0.71207	1	3902	3902		29.551	0.38069	1	789730			1010	7484	701	702	1274	1274					0.08773677133876845
AKKRAEDDAKK	11	Unmodified	_AKKRAEDDAKK_					0	0	0		nc|ENSG00000105048|P13805-2|TNNT1;nc|ENSG00000105048|P13805-3|TNNT1;ENSG00000105048|ENST00000588981|TNNT1	nc|ENSG00000105048|P13805-2|TNNT1	nc|ENSG00000105048|P13805-2|TNNT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	630.3599243164062	2	630.356951	1258.69935	0.2707	0.00017064	3.0234	0.0019058	3.2941	0.0020765	630.3587234494281	46.939	0.62566	46.851	46.509	47.135	-0.087646					47	17	4	0	0	0	0.46531	1	3500	3500		45.022	0	1	514510			1011	2180	702	703	1275	1275					0.0803466085776563
AKKRVIVKKLP	11	Unmodified	_AKKRVIVKKLP_					0	0	0		ENSG00000064270|ENST00000262429|ATP2C2;nc|ENSG00000064270|O75185-2|ATP2C2;nc|ENSG00000064270|O75185-3|ATP2C2	ENSG00000064270|ENST00000262429|ATP2C2	ENSG00000064270|ENST00000262429|ATP2C2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3028564453125	3	427.30273	1278.88636	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.97	1	112.02	111.52	112.52	0.041832								0	0	0	0.56276	1	13543	13543		6.001	2.382	1				1012	1099	703	704	1276	1276					0.25807349203978447
AKKWNLPAV	9	Unmodified	_AKKWNLPAV_					0	0	0		ENSG00000163781|ENST00000260810|TOPBP1	ENSG00000163781|ENST00000260810|TOPBP1	ENSG00000163781|ENST00000260810|TOPBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8084716796875	2	513.808377	1025.6022	-0.15906	-8.1728E-05	1.3381	0.00068753	1.179	0.0006058	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.7932	1	3596	3596		24.203	1.1603	1	1484700			1013	5861	704	705	1277	1277					0.0904234343945518
AKLGVKRC	8	Unmodified	_AKLGVKRC_					0	0	0		ENSG00000124935|ENST00000244926|SCGB1D2	ENSG00000124935|ENST00000244926|SCGB1D2	ENSG00000124935|ENST00000244926|SCGB1D2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.766845703125	2	437.768197	873.521842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.535	1	23.535	23.035	24.035	0								0	0	0	0.30976	1	745	745		12.959	0	1				1014	3370	705	706	1278	1278					0.08002158844772111
AKLIFLYRSP	10	Unmodified	_AKLIFLYRSP_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1;ENST00000521877.1_1_16:88782015-88782615:-|nuORF;ENST00000484567.5_1_16:88782015-88783673:-|nuORF;nc|ENSG00000154864|Q9H5I5-3|PIEZO2;nc|ENSG00000154864|Q9H5I5-2|PIEZO2;nc|ENSG00000154864|Q9H5I5|PIEZO2;nc|ENSG00000154864|Q9H5I5-4|PIEZO2;ENSG00000154864|ENST00000674853|PIEZO2	ENSG00000103335|ENST00000301015|PIEZO1;nc|ENSG00000154864|Q9H5I5-3|PIEZO2	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.24700927734375	3	403.24477	1206.71248	3.1806	0.0012826	2.1516	0.00086761	5.3322	0.0021502	403.2455898338112	104.57	4.2773	104.61	103.55	107.83	0.039864					310	101	5	0	0	0	0.86409	1	11595	11595		25.126	8.5961	1	15278000			1015	2075;5302	706	707	1279	1279					0.11739143707836774
AKLIRQAIA	9	Unmodified	_AKLIRQAIA_					0	0	0			REV__ENST00000471075.1_1_3:171371881-171395443:-|nuORF	REV__ENST00000471075.1_1_3:171371881-171395443:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.3199768066406	2	492.321651	982.62875	0.74523	0.00036689	-3.4489	-0.001698	-2.7037	-0.0013311	492.31988209733197	16.027	0.37632	16.003	15.827	16.203	-0.024035					27	15	2	0	0	0	0.7932	1	95	95		24.203	3.2558	1	92930	+		1016	16715	707	708	1280	1280					0.13674032330789032
AKLKPLLKDIL	11	Unmodified	_AKLKPLLKDIL_					0	0	0			REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.92254638671875	3	417.951475	1250.83259	-1.7717	-0.00074049	-2.2651	-0.0009467	-4.0368	-0.0016872	417.95045690245036	105.71	0.38217	105.87	105.62	106	0.15924					15	9	2	0	0	0	0.17784	1	11251	11251		17.167	15.748	1	83157	+		1017	17226	708	709	1281	1281					0.21721131981644248
AKLLLHAEEKK	11	Unmodified	_AKLLLHAEEKK_					0	0	0			REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.39208984375	2	640.390262	1278.76597	0.58214	0.0003728	3.8031	0.0024355	4.3852	0.0028083	640.3927395119395	53.856	0.94003	53.879	53.327	54.267	0.022541					50	25	3	0	0	0	0.7144	2	4726	4726;4749		29.17	9.1733	1	220800	+		1018	22578	709	710	1282;1283	1282					0.13773896419684206
AKLLTEEETII	11	Unmodified	_AKLLTEEETII_					0	0	0		ENSG00000198932|ENST00000537097|GPRASP1	ENSG00000198932|ENST00000537097|GPRASP1	ENSG00000198932|ENST00000537097|GPRASP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.57501220703125	3	420.574621	1258.70203	-0.87872	-0.00036957	2.7812	0.0011697	1.9025	0.00080014	420.57568384090274	46.88	0.74535	46.852	46.55	47.295	-0.027752					51	18	4	0	0	0	0.74771	1	3856	3856		22.562	4.0305	1	789730			1019	8374	710	711	1284	1284					0.08303071472096235
AKLLVYEER	9	Unmodified	_AKLLVYEER_					0	0	0			REV__nc|ENSG00000173153|P11474-2|ESRRA	REV__nc|ENSG00000173153|P11474-2|ESRRA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.8197631835938	2	560.821681	1119.62881	0.38825	0.00021774	-3.7813	-0.0021206	-3.393	-0.0019029	560.8194818178797	92.394	2.729	92.618	91.343	94.072	0.22352					209	64	4	0	0	0	0.76255	1	9277	9277		35.618	0	1	816880	+		1020	21893	711	712	1285	1285					0.07377987540121467
AKLNIADKS	9	Unmodified	_AKLNIADKS_					0	0	0			REV__ENSG00000116539|ENST00000392403|ASH1L	REV__ENSG00000116539|ENST00000392403|ASH1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2882995605469	2	480.279649	958.544745	1.062	0.00051007	-1.1391	-0.00054708	-0.077075	-3.7018E-05	480.27905293935856	17.131	0.26849	16.648	16.493	16.761	-0.48256					7	5	2	0	0	0	0.20789	1	209	209		32.812	8.2932	1	27127	+		1021	18201	712	713	1286	1286					0.06381456443239131
AKLPAIYV	8	Unmodified	_AKLPAIYV_					0	0	0			REV__ENSG00000112249|ENST00000369162|ASCC3	REV__ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7718505859375	2	437.773471	873.53239	-1.5883	-0.00069529	-3.2181	-0.0014088	-4.8063	-0.0021041	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.86288	2	2195	2195;2322		29.842	7.8817	1	1227500	+		1022	17934	713	714	1287;1288	1287					0.09056464770844741
AKLPMSII	8	Unmodified	_AKLPMSII_					0	0	0		nc|ENSG00000124772|Q9HCH3-2|CPNE5;ENSG00000124772|ENST00000244751|CPNE5	nc|ENSG00000124772|Q9HCH3-2|CPNE5	nc|ENSG00000124772|Q9HCH3-2|CPNE5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.76824951171875	2	436.767332	871.52011	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.908	1	21.465	20.965	21.965	-0.44324								0	0	0	0.30457	1	837	837		50.025	0	1				1023	3358	714	715	1289	1289					0.07921105036166409
AKLRTLHEKR	10	Unmodified	_AKLRTLHEKR_					0	0	0			REV__ENST00000435744.5_1_21:14424137-14433010:+|nuORF	REV__ENST00000435744.5_1_21:14424137-14433010:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3906860351562	2	626.385845	1250.75714	2.3128	0.0014487	-2.3561	-0.0014758	-0.043276	-2.7107E-05	626.8860681580434	110.01	1.5052	110.06	109.66	111.17	0.054062					106	56	2	0	0	0	0.8651	1	13338	13338		25.574	1.3713	1	1083000	+		1024	26682	715	716	1290	1290					0.14178967573889167
AKMAALGVL	9	Unmodified	_AKMAALGVL_					0	0	0		ENST00000553336.5_1_14:23938909-23944520:+|nuORF;ENST00000557097.5_1_14:23938909-23939337:+|nuORF;ENST00000556378.5_1_14:23938909-23940216:+|nuORF	ENST00000553336.5_1_14:23938909-23944520:+|nuORF	ENST00000553336.5_1_14:23938909-23944520:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2657775878906	2	437.264956	872.515359	-0.37471	-0.00016385	2.1781	0.00095241	1.8034	0.00078857	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.7932	1	743	743		23.042	2.0956	1	970200			1025	13697	716	717	1291	1291					0.0740022089340755
AKNCLECR	8	Unmodified	_AKNCLECR_					0	0	0			REV__ENST00000505484.5_1_4:121652936-121737791:-|nuORF	REV__ENST00000505484.5_1_4:121652936-121737791:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.72161865234375	2	468.723129	935.431706	-1.0178	-0.00047706	1.2267	0.00057497	0.2089	9.7918E-05	468.72367977500755	69.802	1.0969	69.938	69.737	70.834	0.13506					82	54	2	0	0	0	0.89494	1	6323	6323		37.159	1.5408	1	1482700	+		1026	19500	717	718	1292	1292					-0.03859258545969624
AKNRTMRQPI	10	Unmodified	_AKNRTMRQPI_					0	0	0			REV__ENSG00000101745|ENST00000262126|ANKRD12	REV__ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	607.837890625	2	607.842956	1213.67136	-1.1865	-0.00072122	-2.5891	-0.0015738	-3.7756	-0.002295	607.8413603198578	31.993	0.62631	31.993	31.801	32.428	0					37	23	2	0	0	0	0.86587	1	1582	1582		29.17	3.596	1	97518	+		1027	17298	718	719	1293	1293					0.0730705939672589
AKNRTMRQPI	10	Unmodified	_AKNRTMRQPI_					0	0	0			REV__ENSG00000101745|ENST00000262126|ANKRD12	REV__ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	607.842956	1213.67136	-0.20505	-0.00012464	-3.3761	-0.0020522	-3.5812	-0.0021768	608.342541916171	31.963	0.32733	31.974	31.72	32.048	0.010899	0.10634	-7.0708E-05	NaN	29.17	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30505	+		1028	17298	718	719							0.0730705939672589
AKNRTMRQPI	10	Unmodified	_AKNRTMRQPI_					0	0	0			REV__ENSG00000101745|ENST00000262126|ANKRD12	REV__ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	607.842956	1213.67136	0.11314	6.8772E-05	-3.4478	-0.0020957	-3.3347	-0.002027	607.8407791786409	32.135	0.4237	32.084	31.778	32.201	-0.051033	0.21653	-0.00015785	NaN	29.17	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25477	+		1029	17298	718	719							0.0730705939672589
AKNRTMRQPI	10	Unmodified	_AKNRTMRQPI_					0	0	0			REV__ENSG00000101745|ENST00000262126|ANKRD12	REV__ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	607.842956	1213.67136	-0.83265	-0.00050612	-2.9161	-0.0017725	-3.7487	-0.0022786	607.8412598646953	31.929	0.42757	31.923	31.66	32.087	-0.0061455	0.05537	0.00048856	NaN	29.17	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24565	+		1030	17298	718	719							0.0730705939672589
AKNRTMRQPI	10	Unmodified	_AKNRTMRQPI_					0	0	0			REV__ENSG00000101745|ENST00000262126|ANKRD12	REV__ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	607.842956	1213.67136	-0.065646	-3.9902E-05	-4.0482	-0.0024607	-4.1138	-0.0025006	607.8404198465599	31.542	0.4284	31.622	31.428	31.856	0.079834	-0.24555	-0.00088772	NaN	29.17	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156260	+		1031	17298	718	719							0.0730705939672589
AKNRTMRQPI	10	Unmodified	_AKNRTMRQPI_					0	0	0			REV__ENSG00000101745|ENST00000262126|ANKRD12	REV__ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	607.842956	1213.67136	0.53805	0.00032705	-4.5651	-0.0027749	-4.027	-0.0024478	607.8398980683235	31.503	0.3824	31.61	31.42	31.802	0.10707	-0.25802	-0.0015161	NaN	29.17	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153950	+		1032	17298	718	719							0.0730705939672589
AKNTLKKAGT	10	Unmodified	_AKNTLKKAGT_					0	0	0			REV__nc|ENSG00000097021|O00154-2|ACOT7	REV__nc|ENSG00000097021|O00154-2|ACOT7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.314023	1030.61349	-0.68072	-0.00035146	0.32195	0.00016623	-0.35876	-0.00018524	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.78666	1	10114	10114		40.058	4.9061	1	39641000	+		1033	17080	719	720	1294	1294					0.09941120742928433
AKPFEVPF	8	Unmodified	_AKPFEVPF_					0	0	0		ENST00000378952.7_1_10:12209703-12222485:-|nuORF;ENSG00000165609|ENST00000491614|NUDT5	ENST00000378952.7_1_10:12209703-12222485:-|nuORF	ENST00000378952.7_1_10:12209703-12222485:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.75238037109375	2	467.755278	933.496004	-1.0561	-0.000494	-3.3168	-0.0015514	-4.3729	-0.0020454	467.7537723635285	56.619	0.57655	56.691	56.503	57.079	0.071835					34	27	2	0	0	0	0.9159	1	4776	4776		44.531	3.9584	1	406840			1034	6099	720	721	1295	1295					0.02659587874143199
AKPKRKPGMRP	11	Unmodified	_AKPKRKPGMRP_					0	0	0		ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3840942382812	2	633.384791	1264.75503	-0.76688	-0.00048573	1.6752	0.001061	0.90827	0.00057528	633.3857297307702	51.44	1.7579	51.44	50.814	52.572	0					77	46	2	0	0	0	0.71207	1	4149	4149		14.137	0	1	76099			1035	785	721	722	1296	1296					0.13324215564421138
AKPKRKPGMRP	11	Unmodified	_AKPKRKPGMRP_					0	0	0		ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.8895263671875	2	633.384791	1264.75503	-0.65878	-0.00041726	1.4864	0.00094146	0.82761	0.00052419	633.3855323611931	51.152	1.3899	51.128	50.512	51.902	-0.02343					67	39	2	0	0	0	0.74405	1	4443	4443		9.1829	0	1	102910			1036	785	721	722	1297	1297					0.13324215564421138
AKPLGAAGR	9	Unmodified	_AKPLGAAGR_					0	0	0			REV__ENSG00000164853|ENST00000316333|UNCX	REV__ENSG00000164853|ENST00000316333|UNCX	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.75628662109375	2	420.756144	839.497735	-2.163	-0.00091008	-0.04622	-1.9447E-05	-2.2092	-0.00092953	420.7559301673431	20.73	1.3575	20.73	19.75	21.107	0					81	64	2	0	0	0	0.7932	1	502	502		23.042	2.5607	1	64367	+		1037	21122	722	723	1298	1298					0.07156641682740883
AKPLGKHE	8	Unmodified	_AKPLGKHE_					0	0	0		nc|ENSG00000172349|Q14005-2|IL16;ENSG00000172349|ENST00000683961|IL16;nc|ENSG00000172349|Q14005-4|IL16;nc|ENSG00000172349|Q14005-3|IL16	nc|ENSG00000172349|Q14005-2|IL16	nc|ENSG00000172349|Q14005-2|IL16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.25494384765625	2	440.255977	878.497401	-1.4879	-0.00065508	-0.26291	-0.00011575	-1.7509	-0.00077082	440.2558124081508	66.549	0.68278	66.682	66.36	67.042	0.13326					60	29	3	0	0	0	0.84341	1	5903	5903		24.203	1.1603	1	243800			1038	6765	723	724	1299	1299					0.05329221962892916
AKPMWALAI	9	Unmodified	_AKPMWALAI_					0	0	0			REV__nc|ENSG00000164037|Q4ZJI4-2|SLC9B1	REV__nc|ENSG00000164037|Q4ZJI4-2|SLC9B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.786376953125	2	500.786056	999.557558	-0.20392	-0.00010212	-1.1148	-0.00055829	-1.3187	-0.0006604	501.2881019935388	28.284	0.50291	28.245	27.974	28.477	-0.039907					15	10	2	0	0	0	0.76996	1	1413	1413		33.516	5.2613	1	18192	+		1039	21011	724	725	1300	1300					0.0577619630174695
AKPMWALAI	9	Unmodified	_AKPMWALAI_					0	0	0			REV__nc|ENSG00000164037|Q4ZJI4-2|SLC9B1	REV__nc|ENSG00000164037|Q4ZJI4-2|SLC9B1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	500.786056	999.557558	-0.20392	-0.00010212	-1.1148	-0.00055829	-1.3187	-0.0006604	501.2881019935388	28.284	0.50291	28.245	27.974	28.477	-0.039907	0	0	NaN	33.516	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18192	+		1040	21011	724	725							0.0577619630174695
AKPTLLVP	8	Unmodified	_AKPTLLVP_					0	0	0			REV__nc|ENSG00000204469|P48634-2|PRRC2A	REV__nc|ENSG00000204469|P48634-2|PRRC2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7745666503906	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.8347	1	3365	3365		23.042	4.7181	1	10965000	+		1041	23495	725	726	1301	1301					0.1071246477083605
AKQFRAVRTT	10	Unmodified	_AKQFRAVRTT_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000054654|Q8WXH0-5|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3433227539062	2	589.343646	1176.67274	-0.40075	-0.00023618	-0.79332	-0.00046754	-1.1941	-0.00070372	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.8651	1	9025	9025		25.574	0	1	4112500			1042	14756	726	727	1302	1302					0.09147016757128767
AKQKTPPPVA	10	Unmodified	_AKQKTPPPVA_					0	0	0		nc|ENSG00000172403|Q9UMS6-5|SYNPO2;nc|ENSG00000172403|Q9UMS6|SYNPO2;nc|ENSG00000172403|Q9UMS6-3|SYNPO2;nc|ENSG00000172403|Q9UMS6-4|SYNPO2;ENSG00000172403|ENST00000307142|SYNPO2	nc|ENSG00000172403|Q9UMS6-5|SYNPO2	nc|ENSG00000172403|Q9UMS6-5|SYNPO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8109741210938	2	518.811116	1035.60768	2.0333	0.0010549	-3.5591	-0.0018465	-1.5258	-0.00079161	518.8092333336378	100.03	1.6601	100.36	99.811	101.47	0.33295					136	41	4	0	0	0	0.70553	1	12180	12180		44.377	1.981	1	17274000			1043	6769	727	728	1303	1303					0.09130022231261137
AKQKTPPPVA	10	Unmodified	_AKQKTPPPVA_					0	0	0		nc|ENSG00000172403|Q9UMS6-5|SYNPO2;nc|ENSG00000172403|Q9UMS6|SYNPO2;nc|ENSG00000172403|Q9UMS6-3|SYNPO2;nc|ENSG00000172403|Q9UMS6-4|SYNPO2;ENSG00000172403|ENST00000307142|SYNPO2	nc|ENSG00000172403|Q9UMS6-5|SYNPO2	nc|ENSG00000172403|Q9UMS6-5|SYNPO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8109130859375	2	518.811116	1035.60768	2.0617	0.0010696	-3.6499	-0.0018936	-1.5882	-0.00082399	518.8091991124401	100.03	1.7649	100.37	99.779	101.54	0.34591					151	44	5	0	0	0	0.54701	1	12187	12187		52.937	3.4952	1	18229000			1044	6769	727	728	1304	1304					0.09130022231261137
AKQLKSRDS	9	Unmodified	_AKQLKSRDS_					0	0	0			REV__nc|ENSG00000134686|Q8IXK0-4|PHC2	REV__nc|ENSG00000134686|Q8IXK0-4|PHC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7935791015625	2	516.793455	1031.57236	0.82179	0.0004247	-0.75095	-0.00038809	0.070838	3.6609E-05	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.77244	1	9027	9027		32.812	0.85756	1	858640	+		1045	19156	728	729	1305	1305					0.057833597034687045
AKRARHKQRKL	11	Unmodified	_AKRARHKQRKL_					0	0	0		nc|ENSG00000125386|P78312-4|FAM193A;nc|ENSG00000125386|P78312-6|FAM193A;nc|ENSG00000125386|P78312-2|FAM193A;nc|ENSG00000125386|P78312-5|FAM193A;nc|ENSG00000125386|P78312|FAM193A;ENSG00000125386|ENST00000637812|FAM193A;ENST00000513898.5_1_4:2696860-2717089:+|nuORF	nc|ENSG00000125386|P78312-4|FAM193A	nc|ENSG00000125386|P78312-4|FAM193A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8020935058594	3	464.632132	1390.87457	-0.20339	-9.4502E-05	2.0711	0.00096228	1.8677	0.00086778	464.6334585450721	45.137	0.72026	45.068	44.636	45.356	-0.068634					17	16	2	0	0	0	0.17729	1	3245	3245		23.378	19.969	1	78447			1046	3385	729	730	1306	1306					0.19476545233351317
AKRILAVV	8	Unmodified	_AKRILAVV_					0	0	0			REV__ENSG00000159399|ENST00000290573|HK2	REV__ENSG00000159399|ENST00000290573|HK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.29998779296875	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.82419	1	7969	7969		13.775	0	1	6323600	+		1047	20658	730	731	1307	1307					0.14627262273359065
AKRIYKIC	8	Unmodified	_AKRIYKIC_					0	0	0			REV__ENST00000434918.6_1_2:162849795-162888681:-|nuORF	REV__ENST00000434918.6_1_2:162849795-162888681:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.7949523925781	2	497.796955	993.579357	-0.62564	-0.00031144	-1.4292	-0.00071144	-2.0548	-0.0010229	497.7959662701911	48.367	0.7753	48.389	47.898	48.674	0.02227					49	20	3	0	0	0	0.85277	1	3711	3711		25.45	2.4077	1	392340	+		1048	26672	731	732	1308	1308					0.08231001050342002
AKRLHRKEKRL	11	Unmodified	_AKRLHRKEKRL_					0	0	0			REV__ENSG00000146909|ENST00000275820|NOM1	REV__ENSG00000146909|ENST00000275820|NOM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9743347167969	3	478.975788	1433.90553	0.11282	5.404E-05	-2.4303	-0.0011641	-2.3175	-0.00111	478.9744667412385	47.884	1.3902	47.875	47.036	48.427	-0.0093231					71	41	3	0	0	0	0.81021	1	3878	3878		9.2118	1.8705	1	396300	+		1049	20040	732	733	1309	1309					0.20593698547577333
AKRLRKGAP	9	Unmodified	_AKRLRKGAP_					0	0	0			REV__ENST00000519690.1_1_5:149827081-149827147:-|nuORF	REV__ENST00000519690.1_1_5:149827081-149827147:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	499.08062744140625	2	498.824892	995.635232	0.080229	4.002E-05	0.18695	9.3256E-05	0.26718	0.00013328	498.82484013972737	16.093	0.17247	16.152	16.06	16.232	0.059269					12	7	2	0	0	0	0.20789	1	117	117		31.955	0	1	93784	+		1050	28084	733	734	1310	1310					0.1372397028217165
AKRRRRPRQIV	11	Unmodified	_AKRRRRPRQIV_					0	0	0			REV__ENSG00000145416|ENST00000514618|MARCHF1	REV__ENSG00000145416|ENST00000514618|MARCHF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30963134765625	3	479.311282	1434.91202	-0.67452	-0.00032331	-3.9951	-0.0019149	-4.6696	-0.0022382	479.3093558580906	59.578	0.87093	59.579	59.126	59.997	0.00051117					40	27	2	0	0	0	0.76579	1	5115	5115		18.531	0.69791	1	137950	+		1051	19944	734	735	1311	1311					0.21195636498964632
AKRRRRPRQIV	11	Unmodified	_AKRRRRPRQIV_					0	0	0			REV__ENSG00000145416|ENST00000514618|MARCHF1	REV__ENSG00000145416|ENST00000514618|MARCHF1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	479.311282	1434.91202	-0.10017	-4.8011E-05	-4.9948	-0.0023941	-5.095	-0.0024421	479.30855831094885	59.597	0.50342	59.584	59.286	59.789	-0.013729	0.081609	-0.0012792	NaN	18.531	14	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75695	+		1052	19944	734	735							0.21195636498964632
AKRRRRPRQIV	11	Unmodified	_AKRRRRPRQIV_					0	0	0			REV__ENSG00000145416|ENST00000514618|MARCHF1	REV__ENSG00000145416|ENST00000514618|MARCHF1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	479.311282	1434.91202	-0.88116	-0.00042235	-4.0135	-0.0019237	-4.8946	-0.002346	479.30932302570574	59.249	0.72431	59.343	59.106	59.83	0.094063	-0.15854	0.00013194	NaN	18.531	37	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111320	+		1053	19944	734	735							0.21195636498964632
AKRSYPHIVK	10	Unmodified	_AKRSYPHIVK_					0	0	0			REV__ENST00000508652.5_1_4:164415907-164436651:+|nuORF	REV__ENST00000508652.5_1_4:164415907-164436651:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2392883300781	3	400.240018	1197.69823	1.9742	0.00079015	-1.3934	-0.0005577	0.58077	0.00023245	400.23938020253263	19.381	0.46087	18.912	18.7	19.161	-0.46967					24	9	3	0	0	0	0.86409	1	525	525		25.126	3.3456	1	132040	+		1054	23333	735	736	1312	1312					0.10728491279519403
AKRSYPHIVK	10	Unmodified	_AKRSYPHIVK_					0	0	0			REV__ENST00000508652.5_1_4:164415907-164436651:+|nuORF	REV__ENST00000508652.5_1_4:164415907-164436651:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	400.240018	1197.69823	1.9742	0.00079015	-1.3934	-0.0005577	0.58077	0.00023245	400.23938020253263	19.381	0.46087	18.912	18.7	19.161	-0.46967	-0.024147	-0.0011617	NaN	25.126	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132040	+		1055	23333	735	736							0.10728491279519403
AKRTLNKSG	9	Unmodified	_AKRTLNKSG_					0	0	0			REV__ENST00000513044.1_1_4:40546437-40631461:-|nuORF	REV__ENST00000513044.1_1_4:40546437-40631461:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7906494140625	2	487.790715	973.566878	-1.0855	-0.00052952	0.66797	0.00032583	-0.41757	-0.00020369	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.7932	1	7686	7686		24.519	1.4825	1	309700	+		1056	27965	736	737	1313	1313					0.07903680911658739
AKSALKSVNLS	11	Unmodified	_AKSALKSVNLS_					0	0	0			REV__ENSG00000161654|ENST00000293406|LSM12	REV__ENSG00000161654|ENST00000293406|LSM12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.333740234375	2	559.332413	1116.65027	-0.033266	-1.8607E-05	3.2771	0.001833	3.2438	0.0018144	559.3341809592414	63.698	1.6782	64.085	63.314	64.992	0.38681					59	38	2	0	0	0	0.66009	1	6894	6894		37.508	5.8739	1	1917400	+		1057	20775	737	738	1314	1314					0.09661372568848492
AKSCIYMVMY	10	Oxidation (M)	_AKSCIYMVM(Oxidation (M))Y_		AKSCIYM(0.003)VM(0.997)Y		AKSCIYM(-25)VM(25)Y	0	0	1			REV__ENST00000264663.9_1_5:43704534-43704627:+|nuORF	REV__ENST00000264663.9_1_5:43704534-43704627:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	613.2777709960938	2	612.776713	1223.53887	-0.29935	-0.00018344	-3.5561	-0.0021791	-3.8554	-0.0023625	612.7745846223667	51.863	0.98487	51.861	51.526	52.511	-0.0020447					49	22	3	0	0	0	0.67571	1	4489	4489		45.972	9.5255	2	349660	+		1058	24478	738	739	1315	1315		382			-0.06395469446601965
AKSGAAHLF	9	Unmodified	_AKSGAAHLF_					0	0	0		nc|ENSG00000004846|Q2M3G0-1|ABCB5;ENSG00000004846|ENST00000404938|ABCB5	nc|ENSG00000004846|Q2M3G0-1|ABCB5	nc|ENSG00000004846|Q2M3G0-1|ABCB5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2494812011719	2	451.248152	900.481751	-0.24052	-0.00010853	1.8588	0.00083876	1.6182	0.00073023	451.24888516204976	65.538	1.2999	65.566	64.989	66.289	0.027321					98	67	2	0	0	0	0.78058	1	6246	6246		30.504	4.9296	1	846940			1059	666	739	740	1316	1316					0.02752935445857929
AKSGAAHLF	9	Unmodified	_AKSGAAHLF_					0	0	0		nc|ENSG00000004846|Q2M3G0-1|ABCB5;ENSG00000004846|ENST00000404938|ABCB5	nc|ENSG00000004846|Q2M3G0-1|ABCB5	nc|ENSG00000004846|Q2M3G0-1|ABCB5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.25079345703125	2	451.248152	900.481751	-1.2852	-0.00057995	3.0375	0.0013707	1.7523	0.0007907	451.2493154558184	65.489	1.09	65.618	64.991	66.081	0.12995					90	51	3	0	0	0	0.7932	1	5766	5766		19.104	0.77911	1	1216500			1060	666	739	740	1317	1317					0.02752935445857929
AKSIKSTH	8	Unmodified	_AKSIKSTH_					0	0	0			REV__ENSG00000133636|ENST00000256010|NTS	REV__ENSG00000133636|ENST00000256010|NTS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.2539978027344	2	436.253434	870.492316	-0.9617	-0.00041954	3.944	0.0017206	2.9823	0.001301	436.25498173956515	108.06	0.25016	108.06	107.98	108.23	0					16	9	2	0	0	0	0.81184	1	11253	11253		19.997	0.6368	1	1512600	+		1061	19086	740	741	1318	1318					0.051889181002820806
AKSKMKVPIY	10	Unmodified	_AKSKMKVPIY_					0	0	0			REV__ENST00000438215.1_1_20:33173256-33203893:-|nuORF	REV__ENST00000438215.1_1_20:33173256-33203893:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.8438110351562	2	582.844102	1163.67365	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.86	1	119.8	119.3	120.3	-0.066048								0	0	0	0.45132	1	14161	14161		22.58	0.89391	1		+		1062	17283	741	742	1319	1319					0.0983609508182326
AKSKSPAYTLV	11	Unmodified	_AKSKSPAYTLV_					0	0	0		ENSG00000142798|ENST00000374695|HSPG2	ENSG00000142798|ENST00000374695|HSPG2	ENSG00000142798|ENST00000374695|HSPG2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.8331909179688	2	582.834788	1163.65502	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.573	1	95.008	94.508	95.508	0.43539								0	0	0	0.56276	1	11332	11332		25.574	2.0514	1				1063	4584	742	743	1320	1320					0.07974256711599992
AKSKTKEKSI	10	Unmodified	_AKSKTKEKSI_					0	0	0			REV__ENST00000371160.5_1_X:123159712-123164898:+|nuORF	REV__ENST00000371160.5_1_X:123159712-123164898:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3410034179688	2	560.340238	1118.66592	0.86176	0.00048288	-1.0266	-0.00057525	-0.16485	-9.237E-05	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.86698	1	10972	10972		28.081	0.19925	1	126390000	+		1064	25680	743	744	1321	1321					0.11133659085885483
AKSKTKEKSI	10	Unmodified	_AKSKTKEKSI_					0	0	0			REV__ENST00000371160.5_1_X:123159712-123164898:+|nuORF	REV__ENST00000371160.5_1_X:123159712-123164898:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3403930664062	2	560.340238	1118.66592	-1.4184	-0.00079481	1.2615	0.00070685	-0.15697	-8.7958E-05	560.3408991920513	102.18	3.487	102.32	101.71	105.2	0.13569					387	86	7	0	0	0	0.85981	1	10959	10959		35.152	0.97948	1	120110000	+		1065	25680	743	744	1322	1322					0.11133659085885483
AKSKTSEALAK	11	Unmodified	_AKSKTSEALAK_					0	0	0		nc|ENSG00000123191|P35670-3|ATP7B;nc|ENSG00000123191|P35670-4|ATP7B;ENSG00000123191|ENST00000242839|ATP7B	nc|ENSG00000123191|P35670-3|ATP7B	nc|ENSG00000123191|P35670-3|ATP7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3296508789062	2	567.32987	1132.64519	1.497	0.00084932	-1.6772	-0.00095153	-0.18017	-0.00010222	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.66009	1	9888	9888		37.508	5.9784	1	15259000			1066	3264	744	745	1323	1323					0.08417068706239661
AKSVLEKT	8	Unmodified	_AKSVLEKT_					0	0	0			REV__ENSG00000176029|ENST00000326053|C11orf16	REV__ENSG00000176029|ENST00000326053|C11orf16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26287841796875	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.7961	1	2854	2854		17.365	0.89182	1	2862500	+		1067	22100	745	746	1324	1324					0.07010669040232642
AKSVTSIK	8	Unmodified	_AKSVTSIK_					0	0	0			REV__nc|ENSG00000162849|Q2KJY2-2|KIF26B	REV__nc|ENSG00000162849|Q2KJY2-2|KIF26B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.2591552734375	2	417.258185	832.501818	0.73077	0.00030492	0.058378	2.4359E-05	0.78915	0.00032928	417.25810331191536	21.663	2.6932	21.727	21.148	23.842	0.064745					160	99	2	0	0	0	0.8347	1	644	644		23.042	0	1	105380	+		1068	15444	746	747	1325	1325					0.07886686385813846
AKTFFRDLSA	10	Unmodified	_AKTFFRDLSA_					0	0	0		ENSG00000123066|ENST00000281928|MED13L	ENSG00000123066|ENST00000281928|MED13L	ENSG00000123066|ENST00000281928|MED13L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.310791015625	2	578.31148	1154.60841	-0.93812	-0.00054253	-0.66211	-0.00038291	-1.6002	-0.00092543	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.86272	1	11997	11997		24.519	0.31644	1	3649700			1069	3258	747	748	1326	1326					0.03728816880334307
AKTHGKQTG	9	Unmodified	_AKTHGKQTG_					0	0	0			REV__CON__P02672	REV__CON__P02672	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2540588378906	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.77244	2	8134	8134;8207		32.812	3.6629	1	1603800	+	+	1070	15976	748	749	1327;1328	1327					0.027191324691898444
AKTHGKQTG	9	Unmodified	_AKTHGKQTG_					0	0	0			REV__CON__P02672	REV__CON__P02672	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2539367675781	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.71772	1	8228	8228		39.253	5.0803	1	1482000	+	+	1071	15976	748	749	1329	1329					0.027191324691898444
AKTHGKQTG	9	Unmodified	_AKTHGKQTG_					0	0	0			REV__CON__P02672	REV__CON__P02672	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2537841796875	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.64555	1	8171	8171		44.377	8.7589	1	1324500	+	+	1072	15976	748	749	1330	1330					0.027191324691898444
AKTILTALGLY	11	Unmodified	_AKTILTALGLY_					0	0	0			REV__ENSG00000188613|ENST00000425699|NANOS1	REV__ENSG00000188613|ENST00000425699|NANOS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3532104492188	2	582.355357	1162.69616	0.15829	9.2184E-05	-3.0082	-0.0017518	-2.8499	-0.0016597	582.3534714256248	107.11	1.1934	107.15	106.63	107.82	0.035622					78	27	4	0	0	0	0.69995	1	11792	11792		31.53	1.2121	1	791140	+		1073	23017	749	750	1331	1331					0.12132017751082458
AKTKVVKLIYC	11	Unmodified	_AKTKVVKLIYC_					0	0	0			REV__ENST00000356692.9_1_3:73114625-73114730:+|nuORF	REV__ENST00000356692.9_1_3:73114625-73114730:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.8844604492188	2	633.386134	1264.75771	-0.1242	-7.8669E-05	-0.90852	-0.00057545	-1.0327	-0.00065411	633.3858105087322	58.255	1.1923	58.241	57.672	58.864	-0.013721					76	54	2	0	0	0	0.75457	1	4964	4964		17.468	8.2851	1	113070	+		1074	25393	750	751	1332	1332					0.13592626178751743
AKTLPLHSPL	10	Unmodified	_AKTLPLHSPL_					0	0	0			REV__nc|ENSG00000143578|Q8TEY5-2|CREB3L4	REV__nc|ENSG00000143578|Q8TEY5-2|CREB3L4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.83544921875	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.47	1	117.5	117	118	0.026466								0	0	0	0.45132	1	12911	12911		19.104	0	1		+		1075	19823	751	752	1333	1333					0.10418595265377917
AKTNAAKALGT	11	Unmodified	_AKTNAAKALGT_					0	0	0		ENSG00000117616|ENST00000243189|RSRP1;nc|ENSG00000117616|Q9BUV0-3|RSRP1;nc|ENSG00000117616|Q9BUV0-2|RSRP1	ENSG00000117616|ENST00000243189|RSRP1	ENSG00000117616|ENST00000243189|RSRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.30419921875	2	523.303655	1044.59276	1.0264	0.00053713	-1.3248	-0.00069329	-0.29841	-0.00015616	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.52654	1	8663	8663		50.034	4.0613	1	3817300			1076	2991	752	753	1334	1334					0.07224530363282611
AKTNISSYV	9	Unmodified	_AKTNISSYV_					0	0	0		ENST00000475922.1_1_2:11959598-11964914:+|nuORF;nc|ENSG00000134324|Q14693|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1	ENST00000475922.1_1_2:11959598-11964914:+|nuORF	ENST00000475922.1_1_2:11959598-11964914:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7638854980469	2	491.763832	981.513111	-0.68773	-0.0003382	0.40844	0.00020085	-0.2793	-0.00013735	491.764094371889	63.714	0.58361	63.834	63.594	64.178	0.12004					48	28	2	0	0	0	0.71772	1	5583	5583		39.253	2.0937	1	133120			1077	3929	753	754	1335	1335					0.02161463689287757
AKTSRSVVATG	11	Unmodified	_AKTSRSVVATG_					0	0	0		ENST00000367021.7_1_1:209974702-209979388:-|nuORF	ENST00000367021.7_1_1:209974702-209979388:-|nuORF	ENST00000367021.7_1_1:209974702-209979388:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.8070068359375	2	538.806562	1075.59857	1.2439	0.00067023	-1.0121	-0.00054534	0.2318	0.00012489	538.8059653540298	90.569	3.7366	90.615	89.222	92.959	0.046448					245	88	4	0	0	0	0.72106	1	9501	9501		28.081	0.19925	1	805100			1078	10526	754	755	1336	1336					0.0637962887494723
AKTVLAIVP	9	Unmodified	_AKTVLAIVP_					0	0	0		ENSG00000164080|ENST00000684192|RAD54L2;ENST00000487093.5_1_3:51624427-51671126:+|nuORF	ENSG00000164080|ENST00000684192|RAD54L2	ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3009338378906	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.7932	1	2059	2059		24.203	1.1603	1	1057300			1079	5913	755	756	1337	1337					0.12628422833643071
AKVALIKLKL	10	Unmodified	_AKVALIKLKL_					0	0	0		ENST00000440296.2_1_1:176241950-176242272:+|nuORF	ENST00000440296.2_1_1:176241950-176242272:+|nuORF	ENST00000440296.2_1_1:176241950-176242272:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.344482421875	2	548.894452	1095.77435	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.92	1	120	119.5	120.5	0.087753								0	0	0	0.45132	1	12589	12589		3.1592	0	1				1080	11771	756	757	1338	1338					0.23029495126957045
AKVAPLWV	8	Unmodified	_AKVAPLWV_					0	0	0			REV__nc|ENSG00000006125|P63010-3|AP2B1	REV__nc|ENSG00000006125|P63010-3|AP2B1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.274658203125	2	442.273638	882.532724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.194	1	56.184	55.684	56.684	-0.010136								0	0	0	0.29353	1	5042	5042		28.254	2.8041	1		+		1081	16098	757	758	1339	1339					0.08675884490696717
AKVKLKKIKNM	11	Unmodified	_AKVKLKKIKNM_					0	0	0			REV__nc|ENSG00000095585|Q8WV28-3|BLNK	REV__nc|ENSG00000095585|Q8WV28-3|BLNK	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.28643798828125	3	434.288092	1299.84245	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.94	1	57.91	57.41	58.41	-0.029865								0	0	0	0.56276	1	5366	5366		23.378	0.81632	1		+		1082	17063	758	759	1340	1340					0.20451996715314635
AKVPAKAVVQK	11	Unmodified	_AKVPAKAVVQK_					0	0	0			REV__ENSG00000166197|ENST00000605788|NOLC1	REV__ENSG00000166197|ENST00000605788|NOLC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.6767578125	2	569.868966	1137.72338	0.38851	0.0002214	1.5963	0.00090971	1.9849	0.0011311	569.8692420514711	16.345	0.10803	16.393	16.351	16.459	0.047804					5	4	2	0	0	0	0.17925	1	140	140		19.997	8.4858	1	20699	+		1083	21266	759	760	1341	1341					0.1600254608213163
AKVRVPLL	8	Unmodified	_AKVRVPLL_					0	0	0			REV__ENST00000156825.5_1_19:1576705-1576897:-|nuORF	REV__ENST00000156825.5_1_19:1576705-1576897:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.3069152832031	2	448.308013	894.601472	0.076818	3.4438E-05	-2.764	-0.0012391	-2.6872	-0.0012047	448.3066406433988	20.825	2.1311	20.366	19.266	21.397	-0.4591					84	48	2	0	0	0	0.82464	1	728	728		21.702	1.2205	1	263520	+		1084	24076	760	761	1342	1342					0.14995548790420798
AKYTFKLR	8	Unmodified	_AKYTFKLR_					0	0	0		ENST00000282185.7_1_5:81354323-81354371:+|nuORF	ENST00000282185.7_1_5:81354323-81354371:+|nuORF	ENST00000282185.7_1_5:81354323-81354371:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.809326171875	2	513.808377	1025.6022	-0.49115	-0.00025236	1.4357	0.00073767	0.94454	0.00048531	513.8089618478288	47.549	2.118	48.472	47.871	49.989	0.92315					109	52	4	0	0	0	0.87064	1	4588	4588		29.15	4.9468	1	2805200			1085	9633	761	762	1343	1343					0.0904234343945518
AKYYEHELE	9	Unmodified	_AKYYEHELE_					0	0	0			REV__nc|ENSG00000167210|Q8IVV2|LOXHD1	REV__nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8092651367188	2	591.277303	1180.54005	0.69133	0.00040877	1.0125	0.00059867	1.7038	0.0010074	591.2772468693684	59.385	1.0428	59.354	58.762	59.805	-0.030888					50	28	3	0	0	0	0.20433	1	5608	5608		79.451	7.5735	1	148650	+		1086	21369	762	763	1344	1344					-0.042994724901973314
AKYYEHELE	9	Unmodified	_AKYYEHELE_					0	0	0			REV__nc|ENSG00000167210|Q8IVV2|LOXHD1	REV__nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	591.277303	1180.54005	-0.64086	-0.00037893	1.9911	0.0011773	1.3502	0.00079836	591.2779891183437	59.395	1.1858	59.382	58.5	59.686	-0.013729	0.013643	0.00033542	NaN	79.451	57	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125290	+		1087	21369	762	763							-0.042994724901973314
ALAACLLTFHP	11	Unmodified	_ALAACLLTFHP_					0	0	0			REV__nc|ENSG00000182264|Q8IYV9-3|IZUMO1	REV__nc|ENSG00000182264|Q8IYV9-3|IZUMO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.8108520507812	2	578.812802	1155.61105	1.1623	0.00067276	-1.5024	-0.00086963	-0.34013	-0.00019687	578.8118467059604	110.69	0.65211	110.74	110.67	111.32	0.054062					32	21	2	0	0	0	0.74555	1	13401	13401		23.042	1.3567	1	74045	+		1088	22515	763	764	1345	1345					0.03946949013607082
ALAAKGAPL	9	Unmodified	_ALAAKGAPL_					0	0	0			REV__ENSG00000161992|ENST00000409413|PRR35	REV__ENSG00000161992|ENST00000409413|PRR35	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2565612792969	2	406.255446	810.496338	-0.18841	-7.6542E-05	3.2159	0.0013065	3.0274	0.0012299	406.2565665484172	68.33	0.85134	68.351	67.872	68.724	0.021599					54	39	2	0	0	0	0.7932	1	6397	6397		21.96	2.5999	1	64112	+		1089	20788	764	765	1346	1346					0.08351007593978466
ALAAKIPQ	8	Unmodified	_ALAAKIPQ_					0	0	0		ENSG00000188771|ENST00000338832|PLET1	ENSG00000188771|ENST00000338832|PLET1	ENSG00000188771|ENST00000338832|PLET1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7850341796875	2	406.255446	810.496338	0.76437	0.00031053	2.8391	0.0011534	3.6035	0.0014639	406.25649663672846	32.789	1.8077	33	32.465	34.272	0.21168					82	42	4	0	0	0	0.4196	1	2375	2375		24.203	5.8783	1	751020			1090	7958	765	766	1347	1347					0.08351007593978466
ALAASEKKLA	10	Unmodified	_ALAASEKKLA_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2905578613281	2	501.303124	1000.5917	-0.4004	-0.00020072	2.0525	0.0010289	1.6521	0.00082818	501.3038233879507	86.435	0.38388	86.49	86.397	86.781	0.055649					13	8	2	0	0	0	0.37624	1	8813	8813		31.53	10.583	1	71091			1091	1550	766	767	1348	1348					0.09142315994358796
ALAAVCLALV	10	Unmodified	_ALAAVCLALV_					0	0	0		ENSG00000108932|ENST00000580666|SLC16A6	ENSG00000108932|ENST00000580666|SLC16A6	ENSG00000108932|ENST00000580666|SLC16A6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28765869140625	2	472.285889	942.557224	0.72641	0.00034307	3.0865	0.0014577	3.8129	0.0018008	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.85976	1	9889	9889		35.201	1.0282	1	48696000			1092	2440	767	768	1349	1349					0.08364776581902333
ALAAVCLALV	10	Unmodified	_ALAAVCLALV_					0	0	0		ENSG00000108932|ENST00000580666|SLC16A6	ENSG00000108932|ENST00000580666|SLC16A6	ENSG00000108932|ENST00000580666|SLC16A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.28887939453125	2	472.285889	942.557224	2.1469	0.001014	2.0105	0.00094952	4.1574	0.0019635	472.2867264071782	114.66	1.2655	114.67	114.37	115.64	0.0094528					102	61	2	0	0	0	0.86786	1	13875	13875		26.796	1.222	1	83672			1093	2440	767	768	1350	1350					0.08364776581902333
ALAAVRQQLLL	11	Unmodified	_ALAAVRQQLLL_					0	0	0			REV__ENSG00000118898|ENST00000345988|PPL	REV__ENSG00000118898|ENST00000345988|PPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3803100585938	2	598.379697	1194.74484	-0.19423	-0.00011622	3.3027	0.0019763	3.1085	0.00186	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.61774	1	2897	2897		42.396	23.293	1	825320	+		1094	18330	768	769	1351	1351					0.15525931110846614
ALACARVLD	9	Unmodified	_ALACARVLD_					0	0	0		nc|ENSG00000227059|E9PGG2|ANHX;ENSG00000227059|ENST00000545940|ANHX	nc|ENSG00000227059|E9PGG2|ANHX	nc|ENSG00000227059|E9PGG2|ANHX	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2543640136719	2	466.25512	930.495686	-1.4812	-0.00069062	-0.75102	-0.00035017	-2.2322	-0.0010408	466.2546647596287	63.114	1.6104	63.114	62.32	63.93	0					124	75	2	0	0	0	0.7932	1	5516	5516		23.042	0	1	225480			1095	8718	769	770	1352	1352					0.0276584488261733
ALADGVQKV	9	Unmodified	_ALADGVQKV_					0	0	0		nc|ENSG00000100342|O14791-3|APOL1;ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1	nc|ENSG00000100342|O14791-3|APOL1	nc|ENSG00000100342|O14791-3|APOL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.76092529296875	2	450.761092	899.507631	-1.3461	-0.00060678	1.5457	0.00069675	0.19961	8.9978E-05	450.76163292846263	37.672	0.59956	37.689	37.398	37.997	0.016563					33	19	2	0	0	0	0.41566	1	2187	2187		56.721	8.8055	1	175230			1096	1827	770	771	1353	1353					0.053857848974644185
ALAESDVSEL	10	Unmodified	_ALAESDVSEL_					0	0	0			REV__nc|ENSG00000161791|Q8IVF7-2|FMNL3	REV__nc|ENSG00000161791|Q8IVF7-2|FMNL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2546997070312	2	517.256037	1032.49752	0.49681	0.00025698	-0.086254	-4.4615E-05	0.41056	0.00021236	517.2558720128549	69.404	0.88799	69.788	69.224	70.112	0.38416					45	23	4	0	0	0	0.37206	1	7678	7678		66.429	0.6261	1	1331800	+		1097	20778	771	772	1354	1354					-0.017428676184181313
ALAEYVIYR	9	Unmodified	_ALAEYVIYR_					0	0	0		ENSG00000107854|ENST00000371627|TNKS2	ENSG00000107854|ENST00000371627|TNKS2	ENSG00000107854|ENST00000371627|TNKS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.3030395507812	2	549.303124	1096.5917	-1.7881	-0.0009822	1.8444	0.0010131	0.056333	3.0944E-05	549.3039069993536	57.938	1.1636	58.332	57.78	58.943	0.39407					54	28	3	0	0	0	0.096131	3	6056	6033;6045;6056		93.195	34.583	1	1707900			1098	2374	772	773	1355;1356;1357	1357					0.04726315994366814
ALAEYVIYR	9	Unmodified	_ALAEYVIYR_					0	0	0		ENSG00000107854|ENST00000371627|TNKS2	ENSG00000107854|ENST00000371627|TNKS2	ENSG00000107854|ENST00000371627|TNKS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.303955078125	2	549.303124	1096.5917	0.25173	0.00013828	0.11152	6.1259E-05	0.36325	0.00019954	549.3031095524226	57.794	1.4486	58.347	57.724	59.172	0.55323					81	35	3	0	0	0	0.057432	3	6049	6039;6049;6063		104.75	56.233	1	1720900			1099	2374	772	773	1358;1359;1360	1359					0.04726315994366814
ALALAKLL	8	Unmodified	_ALALAKLL_					0	0	0			REV__ENST00000400596.2_1_13:20134155-20134623:-|nuORF;REV__nc|ENSG00000173153|P11474-2|ESRRA	REV__nc|ENSG00000173153|P11474-2|ESRRA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7854919433594	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.81548	1	1293	1293		20.482	0	1	1286900	+		1100	26251;21893	773	774	1361	1361					0.13981055150509292
ALALAKLL	8	Unmodified	_ALALAKLL_					0	0	0			REV__ENST00000400596.2_1_13:20134155-20134623:-|nuORF;REV__nc|ENSG00000173153|P11474-2|ESRRA	REV__nc|ENSG00000173153|P11474-2|ESRRA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7850036621094	2	406.783839	811.553125	0.30634	0.00012461	3.4308	0.0013956	3.7371	0.0015202	406.7851080123586	29.615	1.556	29.525	28.974	30.53	-0.089546					92	35	4	0	0	0	0.87276	1	1949	1949		29.842	3.0454	1	1963500	+		1101	26251;21893	773	774	1362	1362					0.13981055150509292
ALALALWLLMP	11	Unmodified	_ALALALWLLMP_					0	0	0		ENSG00000099203|ENST00000214869|TMED1	ENSG00000099203|ENST00000214869|TMED1	ENSG00000099203|ENST00000214869|TMED1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5904541015625	3	404.578872	1210.71479	0.012694	5.1358E-06	-2.0938	-0.00084709	-2.0811	-0.00084196	404.5780102008978	16.159	0.21663	16.219	16.084	16.301	0.059269					14	9	2	0	0	0	0.17754	1	114	114		10.587	0	1	49628			1102	1747	774	775	1363	1363					0.11785856121286997
ALALCKAIA	9	Unmodified	_ALALCKAIA_					0	0	0		ENST00000598497.1_1_19:58600016-58601841:-|nuORF	ENST00000598497.1_1_19:58600016-58601841:-|nuORF	ENST00000598497.1_1_19:58600016-58601841:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2657165527344	2	437.264956	872.515359	0.61137	0.00026733	1.1908	0.00052067	1.8021	0.00078801	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.7932	1	810	810		26.796	5.0938	1	1313200			1103	14367	775	776	1364	1364					0.07400220893373444
ALALIIIMGI	10	Unmodified	_ALALIIIMGI_					0	0	0		nc|ENSG00000092068|Q9UHI5-4|SLC7A8;ENSG00000092068|ENST00000316902|SLC7A8	nc|ENSG00000092068|Q9UHI5-4|SLC7A8	nc|ENSG00000092068|Q9UHI5-4|SLC7A8	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.3333129882812	2	514.332839	1026.65112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.654	1	24.654	24.154	25.154	0								0	0	0	0.45132	1	853	853		26.796	2.2769	1				1104	1690	776	777	1365	1365					0.13886495684209876
ALALNIGNLAM	11	Unmodified	_ALALNIGNLAM_					0	0	0			REV__ENSG00000108784|ENST00000225927|NAGLU	REV__ENSG00000108784|ENST00000225927|NAGLU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.81591796875	2	550.810259	1099.60597	-0.002921	-1.6089E-06	3.5643	0.0019632	3.5614	0.0019616	550.8119720585922	26.519	0.44167	26.565	26.301	26.743	0.045507					18	12	2	0	0	0	0.72918	1	1136	1136		26.693	2.1737	1	38797	+		1105	17730	777	778	1366	1366					0.06014645151003606
ALALVRMLILP	11	Unmodified	_ALALVRMLILP_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.9293518066406	3	403.929905	1208.76789	-1.7749	-0.00071695	1.1305	0.00045664	-0.64445	-0.00026031	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.78683	1	3554	3554		14.086	0.57807	1	2526100			1106	3344	778	779	1367	1367					0.17185233903956032
ALALVRMLILP	11	Unmodified	_ALALVRMLILP_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9292907714844	3	403.929905	1208.76789	0.51429	0.00020774	-1.9632	-0.00079301	-1.4489	-0.00058527	403.92898888715627	45.158	1.872	45.621	44.495	46.367	0.46313					165	45	4	0	0	0	0.76251	1	4183	4183		19.263	0.73163	1	5214800			1107	3344	778	779	1368	1368					0.17185233903956032
ALALVRMLILP	11	Unmodified	_ALALVRMLILP_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.929443359375	3	403.929905	1208.76789	0.41682	0.00016837	-1.4098	-0.00056947	-0.99301	-0.00040111	403.92919444194524	46.164	0.84489	46.636	46.254	47.099	0.47139					60	20	4	0	0	0	0.80593	1	4328	4328		10.104	0.45776	1	1771500			1108	3344	778	779	1369	1369					0.17185233903956032
ALALVRMLILP	11	Unmodified	_ALALVRMLILP_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9294128417969	3	403.929905	1208.76789	-1.067	-0.00043099	-0.46891	-0.00018941	-1.5359	-0.0006204	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.76251	1	4171	4171		19.263	9.1588	1	5907700			1109	3344	778	779	1370	1370					0.17185233903956032
ALAMNLLK	8	Unmodified	_ALAMNLLK_					0	0	0			REV__ENST00000545335.5_2_10:22826185-22828949:-|nuORF	REV__ENST00000545335.5_2_10:22826185-22828949:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26531982421875	2	437.264956	872.515359	1.7622	0.00077054	0.050084	2.19E-05	1.8123	0.00079244	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.81548	1	1049	1049		20.482	0.48506	1	1079000	+		1110	28522	779	780	1371	1371					0.07400220893396181
ALAPGARR	8	Unmodified	_ALAPGARR_					0	0	0		ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2484130859375	2	406.248486	810.48242	-1.8141	-0.00073698	2.0083	0.00081588	0.1942	7.8892E-05	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.86791	1	8837	8837		28.254	1.4582	1	42617000			1111	9630	780	781	1372	1372					0.06959774885558545
ALAPLLASS	9	Unmodified	_ALAPLLASS_					0	0	0			REV__ENST00000519868.1_1_5:169508643-169509859:+|nuORF	REV__ENST00000519868.1_1_5:169508643-169509859:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.7513427734375	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.7932	1	7126	7126		19.36	4.6959	1	423780	+		1112	28090	781	782	1373	1373					0.06383284011519663
ALAPQCWAY	9	Unmodified	_ALAPQCWAY_					0	0	0		ENST00000291232.4_2_22:42319190-42319607:-|nuORF	ENST00000291232.4_2_22:42319190-42319607:-|nuORF	ENST00000291232.4_2_22:42319190-42319607:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.2450561523438	2	511.741845	1021.46914	0.66509	0.00034035	2.5898	0.0013253	3.2549	0.0016657	512.2448520958832	63.617	0.72165	64.172	63.84	64.561	0.55449					26	16	2	0	0	0	0.77546	1	6877	6877		31.955	0	1	197760			1113	9678	782	783	1374	1374					-0.04073844008712513
ALAPQCWAY	9	Unmodified	_ALAPQCWAY_					0	0	0		ENST00000291232.4_2_22:42319190-42319607:-|nuORF	ENST00000291232.4_2_22:42319190-42319607:-|nuORF	ENST00000291232.4_2_22:42319190-42319607:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	511.741845	1021.46914	-0.054113	-2.7692E-05	3.7925	0.0019408	3.7384	0.0019131	511.74270320029603	64.157	0.16249	64.156	64.061	64.223	-0.00078583	-0.034348	0.00090058	NaN	31.955	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30449			1114	9678	782	783							-0.04073844008712513
ALAPQCWAY	9	Unmodified	_ALAPQCWAY_					0	0	0		ENST00000291232.4_2_22:42319190-42319607:-|nuORF	ENST00000291232.4_2_22:42319190-42319607:-|nuORF	ENST00000291232.4_2_22:42319190-42319607:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	511.741845	1021.46914	-0.2765	-0.0001415	2.9924	0.0015313	2.7159	0.0013898	511.74314437527096	63.856	0.69385	64.243	63.833	64.527	0.38681	0.052886	8.1718E-05	NaN	31.955	29	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	152320			1115	9678	782	783							-0.04073844008712513
ALAPRPKGPLM	11	Unmodified	_ALAPRPKGPLM_					0	0	0		ENST00000273067.4_1_2:217235990-217236398:-|nuORF	ENST00000273067.4_1_2:217235990-217236398:-|nuORF	ENST00000273067.4_1_2:217235990-217236398:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8428955078125	2	575.841894	1149.66923	0.78302	0.0004509	1.062	0.00061152	1.845	0.0010624	575.8423757005949	90.383	2.7025	90.537	88.725	91.427	0.15388					214	64	4	0	0	0	0.73893	1	9021	9021		24.519	0.31644	1	2399100			1116	9573	783	784	1375	1375					0.10038630658914371
ALAPVATVKYT	11	Unmodified	_ALAPVATVKYT_					0	0	0		nc|ENSG00000182333|P07098-2|LIPF;nc|ENSG00000182333|P07098-4|LIPF;ENSG00000182333|ENST00000238983|LIPF;nc|ENSG00000182333|P07098-3|LIPF	nc|ENSG00000182333|P07098-2|LIPF	nc|ENSG00000182333|P07098-2|LIPF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3305053710938	2	567.331882	1132.64921	-1.2007	-0.00068122	-1.9524	-0.0011076	-3.1531	-0.0017889	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.68532	1	9127	9127		33.922	3.6039	1	5763000			1117	7450	784	785	1376	1376					0.0881915819995811
ALAPVATVKYT	11	Unmodified	_ALAPVATVKYT_					0	0	0		nc|ENSG00000182333|P07098-2|LIPF;nc|ENSG00000182333|P07098-4|LIPF;ENSG00000182333|ENST00000238983|LIPF;nc|ENSG00000182333|P07098-3|LIPF	nc|ENSG00000182333|P07098-2|LIPF	nc|ENSG00000182333|P07098-2|LIPF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.330078125	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.7144	1	9501	9501		29.17	3.596	1	15673000			1118	7450	784	785	1377	1377					0.0881915819995811
ALAPVATVKYT	11	Unmodified	_ALAPVATVKYT_					0	0	0		nc|ENSG00000182333|P07098-2|LIPF;nc|ENSG00000182333|P07098-4|LIPF;ENSG00000182333|ENST00000238983|LIPF;nc|ENSG00000182333|P07098-3|LIPF	nc|ENSG00000182333|P07098-2|LIPF	nc|ENSG00000182333|P07098-2|LIPF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3297119140625	2	567.331882	1132.64921	0.48094	0.00027285	-3.8594	-0.0021896	-3.3785	-0.0019167	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.68532	2	9004	9004;9053		33.922	4.5588	1	6590100			1119	7450	784	785	1378;1379	1378					0.0881915819995811
ALAQRARG	8	Unmodified	_ALAQRARG_					0	0	0			REV__nc|ENSG00000126012|P41229-2|KDM5C	REV__nc|ENSG00000126012|P41229-2|KDM5C	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7518005371094	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.744	1	76.793	76.293	77.293	0.049194								0	0	0	0.29452	1	7423	7423		33.516	3.674	1		+		1120	18692	785	786	1380	1380					0.061148733972345326
ALARSRGAR	9	Unmodified	_ALARSRGAR_					0	0	0		ENSG00000213563|ENST00000524821|C8orf82	ENSG00000213563|ENST00000524821|C8orf82	ENSG00000213563|ENST00000524821|C8orf82	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3206481933594	2	479.288674	956.562795	-1.0707	-0.00051317	-2.54	-0.0012174	-3.6106	-0.0017305	479.2868590192047	59.082	0.27258	59.635	59.536	59.809	0.55323					8	6	2	0	0	0	0.20789	1	6235	6235		24.203	3.7209	1	129170			1121	8594	786	787	1381	1381					0.08277636208606509
ALASAAAVVQ	10	Unmodified	_ALASAAAVVQ_					0	0	0			REV__ENSG00000133124|ENST00000372129|IRS4	REV__ENSG00000133124|ENST00000372129|IRS4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7615051269531	2	450.761092	899.507631	0.017655	7.9582E-06	0.41552	0.0001873	0.43317	0.00019526	450.76097096710026	37.587	0.61326	37.529	37.238	37.851	-0.057915					36	21	2	0	0	0	0.33399	1	2161	2161		69.628	21.97	1	186270	+		1122	19062	787	788	1382	1382					0.053857848974644185
ALASAALAGPA	11	Unmodified	_ALASAALAGPA_					0	0	0		ENST00000564063.1_1_1:108742725-108743325:+|nuORF	ENST00000564063.1_1_1:108742725-108743325:+|nuORF	ENST00000564063.1_1_1:108742725-108743325:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30126953125	2	456.761092	911.507631	-1.2585	-0.00057482	1.1443	0.00052265	-0.11421	-5.2167E-05	456.76164568795974	34.521	0.71511	34.56	34.285	35	0.038643					42	27	3	0	0	0	0.1753	1	1799	1799		35.618	7.736	1	72498			1123	13881	788	789	1383	1383					0.048337848974597364
ALASAALAGPA	11	Unmodified	_ALASAALAGPA_					0	0	0		ENST00000564063.1_1_1:108742725-108743325:+|nuORF	ENST00000564063.1_1_1:108742725-108743325:+|nuORF	ENST00000564063.1_1_1:108742725-108743325:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	456.761092	911.507631	0.14888	6.8004E-05	-0.26008	-0.0001188	-0.1112	-5.0791E-05	456.7610134597719	34.561	0.48896	34.506	34.164	34.653	-0.055149	-0.0072616	-0.00072197	NaN	35.618	25	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64349			1124	13881	788	789							0.048337848974597364
ALASDETPALP	11	Unmodified	_ALASDETPALP_					0	0	0			REV__nc|ENSG00000215041|Q96JN8-2|NEURL4	REV__nc|ENSG00000215041|Q96JN8-2|NEURL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	542.7796020507812	2	542.779679	1083.5448	0.29053	0.00015769	-0.39798	-0.00021602	-0.10746	-5.8326E-05	542.7793490020276	34.494	0.71979	34.438	34.09	34.81	-0.056381					46	15	4	0	0	0	0.64498	1	2201	2201		39.253	1.4413	1	511340	+		1125	23674	789	790	1384	1384					0.006374116525421414
ALASWRGD	8	Unmodified	_ALASWRGD_					0	0	0			REV__ENST00000491145.5_1_15:65204114-65206248:+|nuORF	REV__ENST00000491145.5_1_15:65204114-65206248:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2650451660156	2	438.222134	874.429715	0.13001	5.6974E-05	3.852	0.001688	3.982	0.001745	438.22228186690637	25.115	0.26892	24.786	24.658	24.927	-0.32825					6	5	2	0	0	0	0.4196	1	1272	1272		23.042	4.7181	1	8683.6	+		1126	27651	790	791	1385	1385					-0.012522279679046733
ALCDRSEE	8	Unmodified	_ALCDRSEE_					0	0	0			REV__ENSG00000136021|ENST00000360820|SCYL2	REV__ENSG00000136021|ENST00000360820|SCYL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.6974182128906	2	461.700374	921.386196	-0.84053	-0.00038807	-4.2971	-0.001984	-5.1377	-0.0023721	461.6982735900567	36.523	0.89709	36.47	36.02	36.917	-0.053558					42	19	3	0	0	0	0.88601	1	2426	2426		34.173	1.3601	1	262950	+		1127	15510	791	792	1386	1386					-0.07764205527359991
ALCGYQERIK	10	Unmodified	_ALCGYQERIK_					0	0	0		ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8090209960938	2	590.81079	1179.60703	0.77133	0.00045571	-3.8204	-0.0022571	-3.0491	-0.0018014	590.8085136634772	59.814	1.2746	59.908	59.359	60.634	0.094063					111	41	3	0	0	0	0.37206	1	5172	5172		66.429	0.96389	1	4884800			1128	7672	792	793	1387	1387					0.024408595199020056
ALCGYQERIK	10	Unmodified	_ALCGYQERIK_					0	0	0		ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8095092773438	2	590.81079	1179.60703	0.42073	0.00024857	-3.3903	-0.002003	-2.9696	-0.0017545	590.8087931973557	57.669	1.7305	58.224	57.808	59.538	0.55513					104	42	3	0	0	0	0.30722	1	6072	6072		71.877	7.6702	1	12960000			1129	7672	792	793	1388	1388					0.024408595199020056
ALCKLGVVY	9	Unmodified	_ALCKLGVVY_					0	0	0		ENSG00000071537|ENST00000336735|SEL1L;ENST00000554293.1_1_14:81945919-81950649:-|nuORF	ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.2784423828125	2	483.278063	964.541574	2.0431	0.00098738	-0.56456	-0.00027284	1.4785	0.00071454	483.27782445100183	95.324	2.0754	95.266	94.681	96.756	-0.057526					132	48	4	0	0	0	0.7932	1	10298	10298		26.796	2.5934	1	1278800			1130	1257	793	794	1389	1389					0.05788490064878715
ALCKLVLG	8	Carbamidomethyl (C)	_ALC(Carbamidomethyl (C))KLVLG_	ALC(1)KLVLG		ALC(45)KLVLG		0	1	0			REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2655944824219	2	437.264956	872.515359	-0.36505	-0.00015962	2.0195	0.00088307	1.6545	0.00072345	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.9159	1	985	985		44.531	10.359	1	1300600	+		1131	18364	794	795	1390	1390	236				0.0740022089340755
ALCLALYL	8	Unmodified	_ALCLALYL_					0	0	0		ENST00000359591.8_1_14:23347257-23347470:+|nuORF	ENST00000359591.8_1_14:23347257-23347470:+|nuORF	ENST00000359591.8_1_14:23347257-23347470:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2552185058594	2	440.254057	878.493561	-0.8618	-0.00037941	3.7524	0.001652	2.8906	0.0012726	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.84567	1	6904	6904		24.504	2.8017	1	1365500			1132	10432	795	796	1391	1391					0.049454161448238665
ALCTTWTILY	10	Carbamidomethyl (C)	_ALC(Carbamidomethyl (C))TTWTILY_	ALC(1)TTWTILY		ALC(42)TTWTILY		0	1	0			REV__ENSG00000175877|ENST00000320531|TMEM270	REV__ENSG00000175877|ENST00000320531|TMEM270	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3118286132812	2	621.315374	1240.6162	0.63123	0.00039219	-3.4099	-0.0021186	-2.7787	-0.0017264	621.3133786370522	68.643	0.50154	68.772	68.523	69.024	0.12838					30	18	3	0	0	0	0.74274	1	6191	6191		42.396	8.2236	1	159260	+		1133	22087	796	797	1392	1392	268				0.005512080855851309
ALCTYNGQ	8	Unmodified	_ALCTYNGQ_					0	0	0			REV__nc|ENSG00000176834|Q8N0Z9-2|VSIG10	REV__nc|ENSG00000176834|Q8N0Z9-2|VSIG10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.1972961425781	2	435.194728	868.374903	1.4332	0.00062371	3.1889	0.0013878	4.6221	0.0020115	435.19597064479416	100.15	0.74585	100.49	100.14	100.88	0.33295					31	18	2	0	0	0	0.91977	1	12116	12116		45.952	5.3793	1	420750	+		1134	22146	797	798	1393	1393					-0.06454982830825884
ALDLAAAPR	9	Unmodified	_ALDLAAAPR_					0	0	0			REV__ENST00000319694.2_1_7:29603568-29603868:+|nuORF	REV__ENST00000319694.2_1_7:29603568-29603868:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.25933837890625	2	449.261259	896.507966	-0.14446	-6.49E-05	-1.6357	-0.00073486	-1.7802	-0.00079976	449.2602580863219	68.899	0.74516	68.925	68.628	69.373	0.026367					56	32	3	0	0	0	0.69624	1	6508	6508		40.778	5.1599	1	200640	+		1135	24990	798	799	1394	1394					0.055572046173210765
ALDLAAAPR	9	Unmodified	_ALDLAAAPR_					0	0	0			REV__ENST00000319694.2_1_7:29603568-29603868:+|nuORF	REV__ENST00000319694.2_1_7:29603568-29603868:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.26171875	2	449.261259	896.507966	-0.14444	-6.4893E-05	-1.6666	-0.00074873	-1.811	-0.00081362	449.26035078800385	70.867	0.56902	70.901	70.62	71.189	0.034004					49	28	2	0	0	0	0.74721	1	6693	6693		37.159	0	1	180840	+		1136	24990	798	799	1395	1395					0.055572046173210765
ALDLAAAPR	9	Unmodified	_ALDLAAAPR_					0	0	0			REV__ENST00000319694.2_1_7:29603568-29603868:+|nuORF	REV__ENST00000319694.2_1_7:29603568-29603868:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2611389160156	2	449.261259	896.507966	-1.3148	-0.0005907	-0.24675	-0.00011085	-1.5616	-0.00070155	449.26091050300573	68.569	0.72878	68.705	68.381	69.11	0.13522					52	29	2	0	0	0	0.78983	1	6166	6166		27.882	0	1	207860	+		1137	24990	798	799	1396	1396					0.055572046173210765
ALDNLILA	8	Unmodified	_ALDNLILA_					0	0	0		ENSG00000184166|ENST00000641833|OR1D2	ENSG00000184166|ENST00000641833|OR1D2	ENSG00000184166|ENST00000641833|OR1D2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7523193359375	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.81548	1	7615	7615		20.482	1.1219	1	579450			1138	7585	799	800	1397	1397					0.06383284011519663
ALDPKLHS	8	Unmodified	_ALDPKLHS_					0	0	0		ENSG00000204657|ENST00000641840|OR2H2	ENSG00000204657|ENST00000641840|OR2H2	ENSG00000204657|ENST00000641840|OR2H2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.5947265625	2	440.747985	879.481417	2.4753	0.001091	-1.8313	-0.00080712	0.64404	0.00028386	440.74702681312095	25.14	0.48635	24.709	24.408	24.895	-0.4311					17	10	2	0	0	0	0.4196	1	1302	1302		29.15	4.9468	1	43140			1139	8476	800	801	1398	1398					0.03685515725987898
ALDTAILIR	9	Unmodified	_ALDTAILIR_					0	0	0			REV__ENSG00000080007|ENST00000370336|DDX43	REV__ENSG00000080007|ENST00000370336|DDX43	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.77130126953125	2	493.305667	984.596781	0.029876	1.4738E-05	0.95857	0.00047287	0.98844	0.0004876	493.30588088775437	18.275	0.49086	17.654	17.493	17.983	-0.62141					15	10	2	0	0	0	0.20789	1	373	373		34.173	7.3764	1	154170	+		1140	16795	801	802	1399	1399					0.10386619857013102
ALDTLSAGH	9	Unmodified	_ALDTLSAGH_					0	0	0			REV__nc|ENSG00000127527|Q9UBC2-3|EPS15L1	REV__nc|ENSG00000127527|Q9UBC2-3|EPS15L1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9395446777344	2	442.727249	883.439946	-0.66748	-0.00029551	3.8652	0.0017112	3.1977	0.0014157	442.72876424530216	56.172	0.0942	56.136	56.063	56.157	-0.036823					5	3	2	0	0	0	0.20789	1	4734	4734		23.042	3.6825	1	53354	+		1141	18738	802	803	1400	1400					-0.006436650333284888
ALEAGAVVL	9	Unmodified	_ALEAGAVVL_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.7519226074219	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.516	1	77.608	77.108	78.108	0.091438								0	0	0	0.28386	1	7246	7246		37.159	5.2042	1				1142	720	803	804	1401	1401					0.06383284011531032
ALEALVND	8	Unmodified	_ALEALVND_					0	0	0			REV__ENSG00000110042|ENST00000227451|DTX4	REV__ENSG00000110042|ENST00000227451|DTX4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.9013366699219	2	422.724175	843.433798	0.26425	0.00011171	-0.5041	-0.0002131	-0.23985	-0.00010139	422.7241687787869	28.868	0.58486	28.899	28.658	29.243	0.030947					30	22	2	0	0	0	0.4196	1	1417	1417		18.324	0	1	28769	+		1143	17788	804	805	1402	1402					0.005818167351435477
ALEALVND	8	Unmodified	_ALEALVND_					0	0	0			REV__ENSG00000110042|ENST00000227451|DTX4	REV__ENSG00000110042|ENST00000227451|DTX4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	422.724175	843.433798	2.5328	0.0010707	-2.9095	-0.0012299	-0.37676	-0.00015927	422.723132729036	28.956	0.43783	28.936	28.755	29.193	-0.019407	0.018765	-0.0010977	NaN	18.324	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20619	+		1144	17788	804	805							0.005818167351435477
ALEEAPDSH	9	Unmodified	_ALEEAPDSH_					0	0	0		ENSG00000206181|ENST00000332567|ELOA2	ENSG00000206181|ENST00000332567|ELOA2	ENSG00000206181|ENST00000332567|ELOA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.7185974121094	2	484.719621	967.42469	0.78283	0.00037946	-3.5837	-0.0017371	-2.8008	-0.0013576	484.71775432526266	100.23	1.3654	100.38	99.851	101.22	0.15073					55	31	3	0	0	0	0.58151	1	10462	10462		47.916	7.343	1	505140			1145	8554	805	806	1403	1403					-0.06032576621191765
ALEEAPDSH	9	Unmodified	_ALEEAPDSH_					0	0	0		ENSG00000206181|ENST00000332567|ELOA2	ENSG00000206181|ENST00000332567|ELOA2	ENSG00000206181|ENST00000332567|ELOA2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	484.719621	967.42469	-0.089106	-4.3191E-05	-2.5939	-0.0012573	-2.683	-0.0013005	484.7181934163306	100.67	0.6989	100.7	100.39	101.09	0.031036	0.24962	0.00059659	NaN	47.916	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141300			1146	8554	805	806							-0.06032576621191765
ALEEAPDSH	9	Unmodified	_ALEEAPDSH_					0	0	0		ENSG00000206181|ENST00000332567|ELOA2	ENSG00000206181|ENST00000332567|ELOA2	ENSG00000206181|ENST00000332567|ELOA2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	484.719621	967.42469	-0.78224	-0.00037917	-1.9476	-0.00094403	-2.7298	-0.0013232	484.7185543547769	100.47	0.73955	100.52	100.12	100.86	0.046356	0.074042	0.0012232	NaN	47.916	31	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125740			1147	8554	805	806							-0.06032576621191765
ALEETHGPT	9	Unmodified	_ALEETHGPT_					0	0	0			REV__nc|ENSG00000148773|P46013-2|MKI67	REV__nc|ENSG00000148773|P46013-2|MKI67	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	477.72930908203125	2	477.729989	953.445425	-0.68246	-0.00032603	1.2463	0.00059537	0.56379	0.00026934	477.7302920495723	22.91	0.42686	22.86	22.662	23.089	-0.050077					17	13	2	0	0	0	0.78058	1	722	722		30.504	2.6214	1	23300	+		1148	15466	806	807	1404	1404					-0.03315986241511837
ALEKLPVFF	9	Unmodified	_ALEKLPVFF_					0	0	0			REV__ENSG00000168564|ENST00000504169|CDKN2AIP	REV__ENSG00000168564|ENST00000504169|CDKN2AIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.3104248046875	2	532.312961	1062.61137	-0.09908	-5.2741E-05	-3.5203	-0.0018739	-3.6194	-0.0019267	532.3109829176856	71.645	0.60355	71.605	71.407	72.011	-0.039001					33	21	2	0	0	0	0.71772	1	6996	6996		39.253	2.0937	1	171130	+		1149	21501	807	808	1405	1405					0.08256692005124933
ALERLQVIDIR	11	Unmodified	_ALERLQVIDIR_					0	0	0		nc|ENSG00000102904|Q2TAA8-2|TSNAXIP1;ENST00000466164.5_1_16:67859786-67861893:+|nuORF;ENST00000568990.5_1_16:67859786-67861893:+|nuORF;nc|ENSG00000102904|Q2TAA8|TSNAXIP1;ENSG00000102904|ENST00000561639|TSNAXIP1;ENST00000569504.5_1_16:67861593-67861893:+|nuORF	nc|ENSG00000102904|Q2TAA8-2|TSNAXIP1	nc|ENSG00000102904|Q2TAA8-2|TSNAXIP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.59881591796875	3	442.601504	1324.78268	-1.7492	-0.0007742	-2.6657	-0.0011798	-4.4149	-0.001954	442.60020962941763	49.1	1.6841	49.1	48.376	50.06	0					110	39	4	0	0	0	0.73621	1	3833	3833		25.126	1.7481	1	216530			1150	2031	808	809	1406	1406					0.13328397305645012
ALFAARAR	8	Unmodified	_ALFAARAR_					0	0	0			REV__ENSG00000122733|ENST00000242315|PHF24	REV__ENSG00000122733|ENST00000242315|PHF24	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2398376464844	2	438.264136	874.51372	0.59509	0.0002608	-1.9212	-0.000842	-1.3261	-0.00058119	438.26328228003734	55.733	1.0916	56.293	55.48	56.572	0.55954					51	27	3	0	0	0	0.4196	1	5744	5744		8.8223	0	1	1188100	+		1151	18512	809	810	1407	1407					0.07144347919643224
ALFAPLLE	8	Unmodified	_ALFAPLLE_					0	0	0			REV__ENST00000288014.6_1_14:24025414-24025621:+|nuORF	REV__ENST00000288014.6_1_14:24025414-24025621:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2574157714844	2	437.257654	872.500755	-1.2293	-0.00053752	1.9942	0.00087197	0.76488	0.00033445	437.2582611517125	30.033	0.44171	30.061	29.876	30.318	0.028618					13	9	2	0	0	0	0.4196	1	1965	1965		21.702	0	1	31865	+		1152	24646	810	811	1408	1408					0.059404720169027314
ALFCGCGH	8	Unmodified	_ALFCGCGH_					0	0	0		nc|ENSG00000150625|P51674-3|GPM6A;nc|ENSG00000150625|P51674-2|GPM6A;ENSG00000150625|ENST00000393658|GPM6A;ENST00000480325.1_1_X:103031923-103040698:+|nuORF;ENST00000465975.1_1_X:103031923-103041682:+|nuORF;ENST00000485931.5_1_X:103031923-103041682:+|nuORF;nc|ENSG00000123560|P60201-2|PLP1;nc|ENSG00000046653|Q13491-2|GPM6B;nc|ENSG00000046653|Q13491|GPM6B;ENSG00000123560|ENST00000621218|PLP1;nc|ENSG00000046653|Q13491-3|GPM6B;ENSG00000046653|ENST00000316715|GPM6B	nc|ENSG00000150625|P51674-3|GPM6A	nc|ENSG00000150625|P51674-3|GPM6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.17022705078125	2	404.167459	806.320365	2.4772	0.0010012	3.8293	0.0015477	6.3065	0.0025489	404.16914392538314	78.456	2.0058	78.508	78.086	80.092	0.051682					179	62	5	0	0	0	0.91333	1	7797	7797		43.626	8.0078	1	6709200			1153	5075	811	812	1409	1409					-0.09054273183244277
ALFLAASLGP	10	Unmodified	_ALFLAASLGP_					0	0	0		ENSG00000107738|ENST00000394957|VSIR	ENSG00000107738|ENST00000394957|VSIR	ENSG00000107738|ENST00000394957|VSIR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2813720703125	2	480.28166	958.548768	2.0772	0.00099766	-3.5987	-0.0017284	-1.5215	-0.00073073	480.27979970211794	99.254	1.495	99.616	99.254	100.75	0.36136					97	37	4	0	0	0	0.85939	1	12050	12050		23.042	0.0057756	1	8902700			1154	2363	812	813	1410	1410					0.06783545936946211
ALFLIQTGLSA	11	Unmodified	_ALFLIQTGLSA_					0	0	0			REV__ENSG00000164199|ENST00000405460|ADGRV1	REV__ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3302001953125	2	567.331882	1132.64921	-1.3958	-0.00079187	-1.9112	-0.0010843	-3.3069	-0.0018761	567.3306768153905	113.32	5.91	113.27	113.24	119.15	-0.044777					245	138	3	0	0	0	0.70737	1	12487	12487		30.318	3.2704	1	1691900	+		1155	21051	813	814	1411	1411					0.0881915819995811
ALFPLLLPEPR	11	Unmodified	_ALFPLLLPEPR_					0	0	0			REV__ENST00000289921.7_1_8:21961277-21961604:+|nuORF	REV__ENST00000289921.7_1_8:21961277-21961604:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5927734375	3	422.592058	1264.75434	1.8674	0.00078915	0.61077	0.00025811	2.4782	0.0010473	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.78085	1	4970	4970		15.333	0.63944	1	997830	+		1156	24653	814	815	1412	1412					0.13255699396358978
ALFSRPTQPK	10	Unmodified	_ALFSRPTQPK_					0	0	0		ENST00000414083.6_2_6:33289124-33290733:-|nuORF;ENST00000266000.10_2_6:33289121-33289671:-|nuORF	ENST00000414083.6_2_6:33289124-33290733:-|nuORF	ENST00000414083.6_2_6:33289124-33290733:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.8273315429688	2	572.827298	1143.64004	1.4899	0.00085347	-0.94504	-0.00054135	0.54488	0.00031212	572.8266091263829	35.221	0.76508	35.602	35.288	36.053	0.3812					45	19	4	0	0	0	0.33399	2	2699	2685;2699		69.628	8.7546	1	1347000			1157	9517	815	816	1413;1414	1414					0.0739680963426963
ALFVLCWM	8	Oxidation (M)	_ALFVLCWM(Oxidation (M))_		ALFVLCWM(1)		ALFVLCWM(44)	0	0	1		ENSG00000278195|ENST00000610913|SSTR3	ENSG00000278195|ENST00000610913|SSTR3	ENSG00000278195|ENST00000610913|SSTR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.74639892578125	2	499.745542	997.476531	0.048924	2.445E-05	2.8125	0.0014055	2.8614	0.00143	499.74682857522964	74.518	3.0175	75.077	74.05	77.067	0.55891					154	74	3	0	0	0	0.91333	1	8527	8527		43.626	8.0078	1	1021700			1158	9028	816	817	1415	1415		159			-0.022308277326146708
ALGAASMSPPP	11	Unmodified	_ALGAASMSPPP_					0	0	0			REV__ENSG00000167978|ENST00000301740|SRRM2	REV__ENSG00000167978|ENST00000301740|SRRM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.2149353027344	2	499.75241	997.490267	0.035777	1.788E-05	0.61626	0.00030798	0.65204	0.00032586	499.75380593178727	23.442	0.13524	23.061	22.973	23.108	-0.38178					4	2	2	0	0	0	0.17318	1	1034	1034		40.778	12.896	1	10097	+		1159	21443	817	818	1416	1416					-0.008578786998327814
ALGCGLAASLL	11	Unmodified	_ALGCGLAASLL_					0	0	0			REV__ENSG00000182752|ENST00000328252|PAPPA	REV__ENSG00000182752|ENST00000328252|PAPPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7800598144531	2	494.778428	987.542302	-0.075058	-3.7137E-05	3.6992	0.0018303	3.6241	0.0017931	494.7801083626478	84.098	2.6315	84.165	82.573	85.204	0.067001					119	60	3	0	0	0	0.71452	1	8370	8370		29.15	2.4566	1	230560	+		1160	22545	818	819	1417	1417					0.0480328471392113
ALGEAEQKV	9	Unmodified	_ALGEAEQKV_					0	0	0			REV__ENST00000587195.5_1_19:56657742-56667135:+|nuORF	REV__ENST00000587195.5_1_19:56657742-56667135:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2760925292969	2	472.756007	943.497461	0.52178	0.00024667	-0.94453	-0.00044653	-0.42275	-0.00019986	472.7554891262265	37.329	0.74127	37.642	37.083	37.825	0.31312					25	17	2	0	0	0	0.20433	1	2972	2972		58.782	7.5893	1	141620	+		1161	21416	819	820	1418	1418					0.023451771722420744
ALGFAQMLPR	10	Unmodified	_ALGFAQMLPR_					0	0	0		ENST00000568205.1_1_16:89616945-89619626:+|nuORF;ENSG00000197912|ENST00000645818|SPG7	ENST00000568205.1_1_16:89616945-89619626:+|nuORF	ENST00000568205.1_1_16:89616945-89619626:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3062133789062	2	552.305144	1102.59573	2.2801	0.0012593	0.10903	6.022E-05	2.3891	0.0013195	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.77314	1	9810	9810		40.778	4.3314	1	1797400			1162	8213	820	821	1419	1419					0.048540822164113706
ALGGHSLCLL	10	Unmodified	_ALGGHSLCLL_					0	0	0			REV__ENST00000548520.1_1_12:104283206-104286955:-|nuORF	REV__ENST00000548520.1_1_12:104283206-104286955:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.3170166015625	2	492.27077	982.526987	-0.55188	-0.00027167	-3.8113	-0.0018762	-4.3632	-0.0021479	492.26945223096726	48.084	0.80656	49.008	48.542	49.349	0.92315					40	19	3	0	0	0	0.37624	1	4625	4625		21.96	0	1	995720	+		1163	28576	821	822	1420	1420					0.03502417916718059
ALGGILKKKGH	11	Unmodified	_ALGGILKKKGH_					0	0	0		ENSG00000198125|ENST00000397326|MB	ENSG00000198125|ENST00000397326|MB	ENSG00000198125|ENST00000397326|MB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.3638916015625	2	561.361308	1120.70806	0.36083	0.00020256	3.644	0.0020456	4.0049	0.0022482	561.3631992343464	46.11	1.1029	46.106	45.577	46.68	-0.0041618					45	26	2	0	0	0	0.75041	1	3681	3681		21.96	1.013	1	163920			1164	8241	822	823	1421	1421					0.15253679284933241
ALGGSGMGGRF	11	Unmodified	_ALGGSGMGGRF_					0	0	0			REV__ENSG00000111057|ENST00000388835|KRT18	REV__ENSG00000111057|ENST00000388835|KRT18	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3480529785156	2	505.247826	1008.4811	1.9066	0.00096332	-1.4291	-0.00072204	0.47754	0.00024128	505.2486610388977	34.509	0.20859	34.814	34.735	34.943	0.30495					8	4	3	0	0	0	0.1728	1	2595	2595		24.519	0	1	50189	+		1165	17846	823	824	1422	1422					-0.022802272654985245
ALGKKIVKP	9	Unmodified	_ALGKKIVKP_					0	0	0			REV__ENST00000532085.1_1_11:118896547-118896784:-|nuORF	REV__ENST00000532085.1_1_11:118896547-118896784:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	476.7206726074219	2	477.328945	952.643337	1.117	0.00053316	-0.98305	-0.00046924	0.13391	6.3917E-05	477.32829154660936	88.438	1.9221	88.887	87.81	89.732	0.44893					100	46	3	0	0	0	0.20789	1	10528	10528		6.7355	0	1	408760	+		1166	28317	824	825	1423	1423					0.16512104478943002
ALGKLIVV	8	Unmodified	_ALGKLIVV_					0	0	0			REV__ENST00000379391.7_2_12:57451973-57452108:-|nuORF	REV__ENST00000379391.7_2_12:57451973-57452108:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7841796875	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.82419	1	1317	1317		13.775	4.3048	1	1410200	+		1167	25918	825	826	1424	1424					0.13981055150509292
ALGKLIVV	8	Unmodified	_ALGKLIVV_					0	0	0			REV__ENST00000379391.7_2_12:57451973-57452108:-|nuORF	REV__ENST00000379391.7_2_12:57451973-57452108:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852783203125	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.82419	2	1406	1406;1417		13.775	4.3048	1	1817700	+		1168	25918	825	826	1425;1426	1425					0.13981055150509292
ALGKLKGH	8	Unmodified	_ALGKLKGH_					0	0	0			REV__ENSG00000162994|ENST00000401408|CLHC1	REV__ENSG00000162994|ENST00000401408|CLHC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.176025390625	2	412.261062	822.507572	2.1497	0.00088624	-3.9323	-0.0016211	-1.7826	-0.0007349	412.2599784832534	95.264	0.15849	95.685	95.546	95.704	0.42051					8	3	3	0	0	0	0.4196	1	11392	11392		28.254	0	1	96622	+		1169	20870	826	827	1427	1427					0.08921829688131311
ALGLEQTRVN	10	Unmodified	_ALGLEQTRVN_					0	0	0			REV__nc|ENSG00000132470|P16144-5|ITGB4	REV__nc|ENSG00000132470|P16144-5|ITGB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.806640625	2	550.806562	1099.59857	0.83023	0.00045729	-1.0151	-0.00055911	-0.18484	-0.00010181	550.8059762800531	29.915	0.63903	29.9	29.601	30.24	-0.015167					24	14	2	0	0	0	0.86218	1	1545	1545		32.812	2.4947	1	81348	+		1170	29846	827	828	1428	1428					0.05275628874960603
ALGLQARAT	9	Unmodified	_ALGLQARAT_					0	0	0		ENST00000372876.1_1_6:42712424-42712766:-|nuORF	ENST00000372876.1_1_6:42712424-42712766:-|nuORF	ENST00000372876.1_1_6:42712424-42712766:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.57550048828125	2	450.766709	899.518865	0.14471	6.5232E-05	0.322	0.00014515	0.46671	0.00021038	450.76768141326534	30.706	0.26165	30.709	30.491	30.753	0.0037212					6	5	2	0	0	0	0.20789	1	2032	2032		42.396	0	1	18289			1171	10721	828	829	1429	1429					0.06508606991610577
ALGMNMGGA	9	Unmodified	_ALGMNMGGA_					0	0	0		nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8;ENSG00000124721|ENST00000327475|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.2435302734375	2	411.185849	820.357144	2.5556	0.0010508	-2.1109	-0.00086798	0.44467	0.00018284	411.1848744242901	102.55	0.45907	102.8	102.47	102.92	0.24821					17	11	2	0	0	0	0.20789	1	12469	12469		26.796	18.102	1	209930			1172	3354	829	830	1430	1430					-0.06022021357330232
ALGMNMGGA	9	Unmodified	_ALGMNMGGA_					0	0	0		nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8;ENSG00000124721|ENST00000327475|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	411.185849	820.357144	2.8649	0.001178	-2.0193	-0.00083032	0.84552	0.00034767	411.184962111535	102.65	0.50723	102.95	102.47	102.98	0.29865	0.074146	3.5877E-05	NaN	26.796	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	335230			1173	3354	829	830							-0.06022021357330232
ALGMVRLG	8	Unmodified	_ALGMVRLG_					0	0	0		nc|ENSG00000166634|Q96P63|SERPINB12;ENSG00000166634|ENST00000382768|SERPINB12	nc|ENSG00000166634|Q96P63|SERPINB12	nc|ENSG00000166634|Q96P63|SERPINB12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	409.2402648925781	2	408.741648	815.468743	-1.9104	-0.00078087	-2.9162	-0.001192	-4.8266	-0.0019728	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.83466	1	2070	2070		23.037	1.3344	1	1364200			1174	6217	830	831	1431	1431					0.0536278106210375
ALGPLPREDG	10	Unmodified	_ALGPLPREDG_					0	0	0		nc|ENSG00000145901|Q15025-7|TNIP1;nc|ENSG00000145901|Q15025-8|TNIP1;nc|ENSG00000145901|Q15025-5|TNIP1;nc|ENSG00000145901|Q15025-6|TNIP1;nc|ENSG00000145901|Q15025-4|TNIP1;nc|ENSG00000145901|Q15025-3|TNIP1;nc|ENSG00000145901|Q15025-2|TNIP1;ENSG00000145901|ENST00000521591|TNIP1	nc|ENSG00000145901|Q15025-7|TNIP1	nc|ENSG00000145901|Q15025-7|TNIP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.7740478515625	2	512.774731	1023.53491	-1.4965	-0.00076736	0.77005	0.00039486	-0.72642	-0.00037249	512.7750166374884	45.034	0.8504	45.034	44.739	45.589	0					37	20	3	0	0	0	0.63899	1	3314	3314		47.96	2.0076	1	378360			1175	14975	831	832	1432	1432					0.02408268437852712
ALGPLPREDG	10	Unmodified	_ALGPLPREDG_					0	0	0		nc|ENSG00000145901|Q15025-7|TNIP1;nc|ENSG00000145901|Q15025-8|TNIP1;nc|ENSG00000145901|Q15025-5|TNIP1;nc|ENSG00000145901|Q15025-6|TNIP1;nc|ENSG00000145901|Q15025-4|TNIP1;nc|ENSG00000145901|Q15025-3|TNIP1;nc|ENSG00000145901|Q15025-2|TNIP1;ENSG00000145901|ENST00000521591|TNIP1	nc|ENSG00000145901|Q15025-7|TNIP1	nc|ENSG00000145901|Q15025-7|TNIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.774658203125	2	512.774731	1023.53491	0.25231	0.00012938	-0.8261	-0.0004236	-0.57379	-0.00029423	512.774198051591	45.3	0.73182	45.281	44.968	45.7	-0.018585					35	16	3	0	0	0	0.86218	1	3596	3596		32.812	0	1	555070			1176	14975	831	832	1433	1433					0.02408268437852712
ALGRASLAIHR	11	Unmodified	_ALGRASLAIHR_					0	0	0		ENST00000508722.5_1_5:34839321-34867279:+|nuORF;nc|ENSG00000205838|Q6PF05-2|TTC23L;ENSG00000205838|ENST00000505624|TTC23L;nc|ENSG00000205838|Q6PF05-3|TTC23L	ENST00000508722.5_1_5:34839321-34867279:+|nuORF	ENST00000508722.5_1_5:34839321-34867279:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8571166992188	2	582.851638	1163.68872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.63	1	118.61	118.11	119.11	-0.024208								0	0	0	0.56276	1	13143	13143		21.686	4.3208	1				1177	8543	832	833	1434	1434					0.11342722994004362
ALGRLLKV	8	Unmodified	_ALGRLLKV_					0	0	0			REV__chrX:47226027-47226294|18|37.67|0.53|6.14|+|0|CDK16,None|1	REV__chrX:47226027-47226294|18|37.67|0.53|6.14|+|0|CDK16,None|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.251953125	2	435.300188	868.585822	-1.4152	-0.00061603	1.8293	0.00079629	0.41413	0.00018027	435.3009066641703	76.571	0.6703	76.66	76.188	76.858	0.089363					44	25	2	0	0	0	0.4196	1	7156	7156		19.36	5.5846	1	123340	+		1178	15951	833	834	1435	1435					0.14627262273359065
ALGRLLMV	8	Unmodified	_ALGRLLMV_					0	0	0		ENSG00000130227|ENST00000252512|XPO7	ENSG00000130227|ENST00000252512|XPO7	ENSG00000130227|ENST00000252512|XPO7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7741394042969	2	436.772948	871.531344	0.068775	3.0039E-05	1.8603	0.00081255	1.9291	0.00084258	436.77361932227035	26.594	0.6912	26.703	26.441	27.132	0.10901					65	32	3	0	0	0	0.82419	1	1019	1019		13.775	1.5685	1	226120			1179	3626	834	835	1436	1436					0.0904392713028983
ALGRVAWP	8	Unmodified	_ALGRVAWP_					0	0	0			REV__chr5:69844913-70420249|13|11.62|0.38|4.93|+|2|TE_info:LTR12E,LTR12E_dup46,ERV1,LTR,donor,+,69844126,69844913|None,GTF2H2B|3	REV__chr5:69844913-70420249|13|11.62|0.38|4.93|+|2|TE_info:LTR12E,LTR12E_dup46,ERV1,LTR,donor,+,69844126,69844913|None,GTF2H2B|3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2519226074219	2	435.253237	868.491922	-0.21094	-9.1811E-05	-4.1608	-0.001811	-4.3718	-0.0019028	435.2513273926442	92.773	0.95985	93.223	92.818	93.778	0.44989					52	22	3	0	0	0	0.86791	1	11081	11081		28.254	3.7503	1	401060	+		1180	15864	835	836	1437	1437					0.05241543171075591
ALGSLRHRLP	10	Unmodified	_ALGSLRHRLP_					0	0	0			REV__ENST00000431948.5_1_7:51111166-51111361:-|nuORF	REV__ENST00000431948.5_1_7:51111166-51111361:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3392944335938	2	560.340907	1118.66726	-1.204	-0.00067466	0.24305	0.00013619	-0.96096	-0.00053847	560.3409757203636	89.276	1.5732	89.747	88.641	90.214	0.47068					77	38	4	0	0	0	0.86348	1	10610	10610		31.53	1.2121	1	617690	+		1181	26627	836	837	1438	1438					0.11267337965296065
ALGVILPEA	9	Unmodified	_ALGVILPEA_					0	0	0			REV__ENSG00000134830|ENST00000595464|C5AR2	REV__ENSG00000134830|ENST00000595464|C5AR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7682800292969	2	441.768386	881.522219	1.5192	0.00067115	-2.2878	-0.0010107	-0.76859	-0.00033954	441.7673408334102	107.1	1.0458	107.2	106.82	107.87	0.10395					97	38	4	0	0	0	0.76996	1	13049	13049		33.516	1.5607	1	2679600	+		1182	19171	837	838	1439	1439					0.07671857045602337
ALGVKFVK	8	Unmodified	_ALGVKFVK_					0	0	0			REV__ENST00000463652.5_1_1:1635130-1635691:-|nuORF	REV__ENST00000463652.5_1_1:1635130-1635691:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.9607238769531	2	431.281463	860.548374	0.08536	3.6814E-05	1.3782	0.00059438	1.4635	0.00063119	431.2819448810767	38.035	0.47286	38.557	38.357	38.83	0.52235					21	11	3	0	0	0	0.4196	1	3152	3152		12.959	5.7658	1	133900	+		1183	27079	838	839	1440	1440					0.11252171007754441
ALHAPPPH	8	Unmodified	_ALHAPPPH_					0	0	0			REV__nc|ENSG00000245848|P49715-3|CEBPA	REV__nc|ENSG00000245848|P49715-3|CEBPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2299499511719	2	420.229762	838.444972	-0.40524	-0.00017029	0.72761	0.00030576	0.32237	0.00013547	420.229926419366	16.908	0.22616	16.829	16.689	16.915	-0.079056					14	7	3	0	0	0	0.88393	2	168	161;168		43.626	13.785	1	61337	+		1184	23856	839	840	1441;1442	1442					0.01928683619939875
ALHAPPPH	8	Unmodified	_ALHAPPPH_					0	0	0			REV__nc|ENSG00000245848|P49715-3|CEBPA	REV__nc|ENSG00000245848|P49715-3|CEBPA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	420.229762	838.444972	0.91159	0.00038308	-0.38877	-0.00016337	0.52282	0.0002197	420.22960808891435	16.645	0.24928	16.722	16.609	16.858	0.07715	-0.048637	-0.00047866	NaN	43.626	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46736	+		1185	23856	839	840							0.01928683619939875
ALHAPPPH	8	Unmodified	_ALHAPPPH_					0	0	0			REV__nc|ENSG00000245848|P49715-3|CEBPA	REV__nc|ENSG00000245848|P49715-3|CEBPA	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	420.229762	838.444972	-0.40524	-0.00017029	0.72761	0.00030576	0.32237	0.00013547	420.229926419366	16.908	0.22616	16.829	16.689	16.915	-0.079056	0.058057	0.00045962	NaN	43.626	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61337	+		1186	23856	839	840							0.01928683619939875
ALHAPPPH	8	Unmodified	_ALHAPPPH_					0	0	0			REV__nc|ENSG00000245848|P49715-3|CEBPA	REV__nc|ENSG00000245848|P49715-3|CEBPA	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	420.229762	838.444972	-1.9007	-0.00079871	2.0746	0.00087181	0.17395	7.3099E-05	420.2305847253251	16.758	0.16098	16.804	16.708	16.869	0.045702	0.03289	0.0015917	NaN	43.626	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59762	+		1187	23856	839	840							0.01928683619939875
ALHAPPPH	8	Unmodified	_ALHAPPPH_					0	0	0			REV__nc|ENSG00000245848|P49715-3|CEBPA	REV__nc|ENSG00000245848|P49715-3|CEBPA	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	420.229762	838.444972	0.50091	0.0002105	-0.32642	-0.00013717	0.17449	7.3325E-05	420.22964719381383	16.821	0.17459	16.797	16.718	16.893	-0.024035	0.026536	-0.00042625	NaN	43.626	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37375	+		1188	23856	839	840							0.01928683619939875
ALHAPPPH	8	Unmodified	_ALHAPPPH_					0	0	0			REV__nc|ENSG00000245848|P49715-3|CEBPA	REV__nc|ENSG00000245848|P49715-3|CEBPA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	420.229762	838.444972	0.99359	0.00041753	-0.58763	-0.00024694	0.40596	0.00017059	420.2292492299766	17.264	0.27285	16.781	16.625	16.898	-0.48256	0.010412	-0.00064579	NaN	43.626	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80277	+		1189	23856	839	840							0.01928683619939875
ALHAPPPH	8	Unmodified	_ALHAPPPH_					0	0	0			REV__nc|ENSG00000245848|P49715-3|CEBPA	REV__nc|ENSG00000245848|P49715-3|CEBPA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	420.229762	838.444972	0.37529	0.00015771	0.0069551	2.9227E-06	0.38224	0.00016063	420.2297437982977	17.302	0.23129	16.691	16.567	16.798	-0.6107	-0.079258	-0.00014607	NaN	43.626	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68063	+		1190	23856	839	840							0.01928683619939875
ALHCRFGH	8	Unmodified	_ALHCRFGH_					0	0	0		ENSG00000089053|ENST00000261819|ANAPC5;ENST00000535641.5_1_12:121766117-121773388:-|nuORF;nc|ENSG00000089053|Q9UJX4-2|ANAPC5;ENST00000534976.5_1_12:121766230-121783868:-|nuORF;ENST00000535472.5_1_12:121764442-121775147:-|nuORF;ENST00000545218.5_1_12:121756099-121775126:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5	ENSG00000089053|ENST00000261819|ANAPC5	ENSG00000089053|ENST00000261819|ANAPC5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.768798828125	2	470.732146	939.449739	-0.70043	-0.00032971	2.8674	0.0013498	2.167	0.0010201	470.73334676211437	52.538	0.41581	53.153	53.033	53.449	0.61436					18	9	2	0	0	0	0.4196	1	5286	5286		21.702	4.3374	1	154370			1191	1604	840	841	1443	1443					-0.022407555089330344
ALHHKQRSL	9	Unmodified	_ALHHKQRSL_					0	0	0		ENST00000417709.5_1_22:46663914-46665043:+|nuORF;ENST00000381031.7_1_22:46663914-46668248:+|nuORF	ENST00000417709.5_1_22:46663914-46665043:+|nuORF	ENST00000417709.5_1_22:46663914-46665043:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3165283203125	2	545.317432	1088.62031	-0.33932	-0.00018504	-1.0312	-0.00056233	-1.3705	-0.00074737	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.71772	1	9063	9063		39.253	4.1008	1	4710900			1192	10942	841	842	1444	1444					0.07954478414194455
ALHKLTEKN	9	Unmodified	_ALHKLTEKN_					0	0	0			REV__nc|ENSG00000108582|O75976-2|CPD	REV__nc|ENSG00000108582|O75976-2|CPD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.306640625	2	527.306198	1052.59784	-0.62415	-0.00032912	-2.1989	-0.0011595	-2.8231	-0.0014886	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.7932	1	10034	10034		23.042	2.0956	1	949980	+		1193	17722	842	843	1445	1445					0.07364834225904815
ALHLALNLY	9	Unmodified	_ALHLALNLY_					0	0	0			REV__ENSG00000083642|ENST00000315596|PDS5B	REV__ENSG00000083642|ENST00000315596|PDS5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.3042602539062	2	514.300384	1026.58622	0.71414	0.00036728	-1.8028	-0.00092718	-1.0887	-0.00055989	514.2992686601868	66.786	0.53473	67.171	66.734	67.269	0.38515					21	14	2	0	0	0	0.5393	1	7287	7287		50.025	7.5501	1	191580	+		1194	16858	843	844	1446	1446					0.07398637202550162
ALHLALNLY	9	Unmodified	_ALHLALNLY_					0	0	0			REV__ENSG00000083642|ENST00000315596|PDS5B	REV__ENSG00000083642|ENST00000315596|PDS5B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	514.300384	1026.58622	0.71414	0.00036728	-1.8028	-0.00092718	-1.0887	-0.00055989	514.2992686601868	66.786	0.53473	67.171	66.734	67.269	0.38515	-0.018404	-0.0010613	NaN	50.025	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191580	+		1195	16858	843	844							0.07398637202550162
ALHLALNLY	9	Unmodified	_ALHLALNLY_					0	0	0			REV__ENSG00000083642|ENST00000315596|PDS5B	REV__ENSG00000083642|ENST00000315596|PDS5B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	514.300384	1026.58622	0.18898	9.7191E-05	0.46463	0.00023896	0.6536	0.00033615	514.80241231127	66.657	0.51096	67.208	66.859	67.37	0.55071	0.018404	0.0012709	NaN	50.025	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181740	+		1196	16858	843	844							0.07398637202550162
ALHMRIHT	8	Unmodified	_ALHMRIHT_					0	0	0		ENSG00000254004|ENST00000523638|ZNF260	ENSG00000254004|ENST00000523638|ZNF260	ENSG00000254004|ENST00000523638|ZNF260	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.7684020996094	2	489.768729	977.522904	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.321	1	21.366	20.866	21.866	0.045401								0	0	0	0.29498	1	570	570		26.796	1.3459	1				1197	8870	844	845	1447	1447					0.033243732136838844
ALHNGKGF	8	Unmodified	_ALHNGKGF_					0	0	0		L1PA11_dup257|chr1:220255199-220257096:+|6.83625221169232|0.4810012897383803|3.83|63.0|58|3|sense	L1PA11_dup257|chr1:220255199-220257096:+|6.83625221169232|0.4810012897383803|3.83|63.0|58|3|sense	L1PA11_dup257|chr1:220255199-220257096:+|6.83625221169232|0.4810012897383803|3.83|63.0|58|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2288818359375	2	422.22722	842.439886	0.38075	0.00016076	0.76925	0.0003248	1.15	0.00048556	422.22752903910396	61.401	1.1417	61.52	61.387	62.529	0.11901					70	54	2	0	0	0	0.86791	1	5387	5387		28.254	1.4582	1	712460			1198	14608	845	846	1448	1448					0.012363797573243573
ALIAKGPHTL	10	Unmodified	_ALIAKGPHTL_					0	0	0			REV__ENST00000470922.5_1_22:19165453-19166237:-|nuORF	REV__ENST00000470922.5_1_22:19165453-19166237:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.3271179199219	2	510.813659	1019.61277	-0.052709	-2.6924E-05	-1.077	-0.00055017	-1.1298	-0.00057709	510.81266897459943	98.073	0.64243	98.13	97.715	98.358	0.056839					19	14	2	0	0	0	0.37624	1	10307	10307		44.377	10.862	1	35685	+		1199	17134	846	847	1449	1449					0.10374326093915442
ALIFKIIMTVF	11	Unmodified	_ALIFKIIMTVF_					0	0	0		nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3;ENSG00000109572|ENST00000513761|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3919067382812	2	648.393428	1294.7723	0.024156	1.5662E-05	-1.0701	-0.00069385	-1.046	-0.00067819	648.3927913840552	106.64	2.0197	106.64	104.87	106.89	0					89	46	4	0	0	0	0.63176	2	11084	11048;11084		40.778	6.8565	1	6259100			1200	14840	847	848	1450;1451	1451					0.13670698326859565
ALIFKIIMTVF	11	Unmodified	_ALIFKIIMTVF_					0	0	0		nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3;ENSG00000109572|ENST00000513761|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3927001953125	2	648.393428	1294.7723	0.024154	1.5661E-05	-0.74622	-0.00048385	-0.72207	-0.00046819	648.3928433509174	107.73	1.0319	107.73	106.84	107.87	0					93	24	4	0	0	0	0.72918	1	11167	11167		26.693	2.1737	1	35129000			1201	14840	847	848	1452	1452					0.13670698326859565
ALIFKIIMTVF	11	Unmodified	_ALIFKIIMTVF_					0	0	0		nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3;ENSG00000109572|ENST00000513761|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3929443359375	2	648.393428	1294.7723	1.8787	0.0012181	-2.7501	-0.0017831	-0.8714	-0.00056501	648.3915145457087	107.1	1.2973	107.13	106.67	107.97	0.035622					111	30	4	0	0	0	0.72918	2	11771	11771;11783		26.693	2.1737	1	42934000			1202	14840	847	848	1453;1454	1453					0.13670698326859565
ALIFKIIMTVF	11	Unmodified	_ALIFKIIMTVF_					0	0	0		nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3;ENSG00000109572|ENST00000513761|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3925170898438	2	648.393428	1294.7723	1.6039	0.00104	-2.4614	-0.001596	-0.8575	-0.000556	648.3917432358439	106.08	2.1363	106.23	104.51	106.65	0.14843					114	53	4	0	0	0	0.72918	1	11376	11376		26.693	3.1702	1	52760000			1203	14840	847	848	1455	1455					0.13670698326859565
ALIFKIIMTVF	11	Unmodified	_ALIFKIIMTVF_					0	0	0		nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3;ENSG00000109572|ENST00000513761|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3924560546875	2	648.393428	1294.7723	0.94474	0.00061257	-1.9201	-0.001245	-0.97532	-0.00063239	648.3921194247092	106.15	2.119	106.24	104.58	106.7	0.099007					110	52	4	0	0	0	0.69995	1	11344	11344		31.53	2.3598	1	47497000			1204	14840	847	848	1456	1456					0.13670698326859565
ALIFKIIMTVF	11	Unmodified	_ALIFKIIMTVF_					0	0	0		nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3;ENSG00000109572|ENST00000513761|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3935546875	2	648.393428	1294.7723	0.94475	0.00061257	-1.5088	-0.00097828	-0.56403	-0.00036572	648.3923298671006	107.11	0.98898	107.2	106.69	107.68	0.091255					92	23	4	0	0	0	0.68378	2	11489	11452;11489		34.173	8.1092	1	51640000			1205	14840	847	848	1457;1458	1458					0.13670698326859565
ALIGSLIYII	10	Unmodified	_ALIGSLIYII_					0	0	0		nc|ENSG00000144452|Q86UK0-2|ABCA12;ENSG00000144452|ENST00000272895|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	539.2806396484375	2	538.341718	1074.66888	0.79583	0.00042843	1.5545	0.00083686	2.3503	0.0012653	538.8429677490881	23.759	0.28589	23.761	23.589	23.875	0.0018959					16	13	2	0	0	0	0.37624	1	756	756		15.642	0	1	97674			1206	4708	848	849	1459	1459					0.13453534210702855
ALIILPSIS	9	Unmodified	_ALIILPSIS_					0	0	0		nc|ENSG00000060566|Q68CJ9-4|CREB3L3;nc|ENSG00000060566|Q68CJ9-2|CREB3L3;ENSG00000060566|ENST00000078445|CREB3L3	nc|ENSG00000060566|Q68CJ9-4|CREB3L3	nc|ENSG00000060566|Q68CJ9-4|CREB3L3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8002624511719	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	1	2768	2768		23.042	5.6775	1	489490			1207	1064	849	850	1460	1460					0.11905003113804469
ALIILPSIS	9	Unmodified	_ALIILPSIS_					0	0	0		nc|ENSG00000060566|Q68CJ9-4|CREB3L3;nc|ENSG00000060566|Q68CJ9-2|CREB3L3;ENSG00000060566|ENST00000078445|CREB3L3	nc|ENSG00000060566|Q68CJ9-4|CREB3L3	nc|ENSG00000060566|Q68CJ9-4|CREB3L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.79931640625	2	463.799686	925.584819	-1.1872	-0.0005506	2.6442	0.0012264	1.4571	0.00067579	463.80074391702703	41.648	1.5471	41.608	41.079	42.626	-0.039845					90	38	3	0	0	0	0.7932	1	3111	3111		17.365	0	1	510860			1208	1064	849	850	1461	1461					0.11905003113804469
ALILELEDAVR	11	Unmodified	_ALILELEDAVR_					0	0	0		ENSG00000221890|ENST00000333039|NPTXR	ENSG00000221890|ENST00000333039|NPTXR	ENSG00000221890|ENST00000333039|NPTXR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.5755920410156	3	414.574844	1240.7027	-0.11717	-4.8575E-05	4.4056	0.0018264	4.2884	0.0017779	414.5766103778177	67.467	0.8855	68.015	67.648	68.534	0.54819					37	20	2	0	0	0	0.70584	1	7422	7422		30.569	1.0181	1	248420			1209	8680	850	851	1462	1462					0.09197910911780127
ALILKIADY	9	Unmodified	_ALILKIADY_					0	0	0		ENSG00000095319|ENST00000372577|NUP188	ENSG00000095319|ENST00000372577|NUP188	ENSG00000095319|ENST00000372577|NUP188	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.31011962890625	2	510.310418	1018.60628	-1.2754	-0.00065085	1.5317	0.00078164	0.25629	0.00013079	510.3110295003225	79.313	0.80144	79.412	79.114	79.915	0.098694					56	25	3	0	0	0	0.21969	1	7468	7468		71.877	2.2498	1	419210			1210	1721	851	852	1463	1463					0.09772388142516775
ALIPVQLLWVN	11	Unmodified	_ALIPVQLLWVN_					0	0	0		nc|ENSG00000074370|Q93084-4|ATP2A3;ENSG00000074370|ENST00000397041|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;nc|ENSG00000174437|P16615-5|ATP2A2;nc|ENSG00000174437|P16615-2|ATP2A2;nc|ENSG00000174437|P16615-3|ATP2A2;nc|ENSG00000174437|P16615-4|ATP2A2;ENSG00000174437|ENST00000539276|ATP2A2;nc|ENSG00000196296|O14983-3|ATP2A1;ENSG00000196296|ENST00000395503|ATP2A1;nc|ENSG00000196296|O14983|ATP2A1	nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000174437|P16615-5|ATP2A2;nc|ENSG00000196296|O14983-3|ATP2A1	nc|ENSG00000174437|P16615-5|ATP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5906982421875	3	422.592058	1264.75434	-0.25442	-0.00010752	1.599	0.00067572	1.3446	0.0005682	422.59266079937345	57.115	1.709	57.086	56.583	58.292	-0.02866					127	51	4	0	0	0	0.74022	1	5354	5354		24.232	3.1996	1	391180			1211	6932;1307;8035	852	853	1464	1464					0.13255699396381715
ALIQNKQLRLL	11	Unmodified	_ALIQNKQLRLL_					0	0	0		nc|ENSG00000163093|Q8N3I7-2|BBS5;ENSG00000163093|ENST00000295240|BBS5	nc|ENSG00000163093|Q8N3I7-2|BBS5	nc|ENSG00000163093|Q8N3I7-2|BBS5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.5993347167969	3	437.281995	1308.82415	0.016757	7.3276E-06	-1.6807	-0.00073494	-1.6639	-0.00072761	437.61402328607704	15.93	0.20949	15.989	15.875	16.084	0.059268					14	7	3	0	0	0	0.18028	1	96	96		10.104	0.8921	1	40479			1212	5766	853	854	1465	1465					0.1820957806496608
ALIRIYFR	8	Unmodified	_ALIRIYFR_					0	0	0			REV__ENSG00000205609|ENST00000380876|EIF3CL	REV__ENSG00000205609|ENST00000380876|EIF3CL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3231811523438	2	526.324194	1050.63383	-0.97244	-0.00051182	2.2263	0.0011717	1.2538	0.00065993	526.3251154514024	71.986	1.1431	72.066	71.808	72.952	0.080032					69	39	2	0	0	0	0.82419	1	6628	6628		13.775	0.81615	1	108890	+		1213	23567	854	855	1466	1466					0.11054336193410563
ALIRKLIA	8	Unmodified	_ALIRKLIA_					0	0	0		ENSG00000092148|ENST00000399332|HECTD1	ENSG00000092148|ENST00000399332|HECTD1	ENSG00000092148|ENST00000399332|HECTD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.3143005371094	2	449.315838	896.617122	0.060144	2.7024E-05	-2.6688	-0.0011991	-2.6086	-0.0011721	449.3144620861982	21.476	1.5551	21.033	20.161	21.716	-0.44324					87	36	3	0	0	0	0.81548	1	751	751		20.482	0	1	594410			1214	1693	855	856	1467	1467					0.1646783530745779
ALIRLALSA	9	Unmodified	_ALIRLALSA_					0	0	0			REV__nc|ENSG00000124006|O75147-2|OBSL1	REV__nc|ENSG00000124006|O75147-2|OBSL1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.30194091796875	2	464.302927	926.591301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.273	1	42.277	41.777	42.777	0.0043983								0	0	0	0.3307	1	2829	2829		19.997	0.6368	1		+		1215	18552	856	857	1468	1468					0.1250694106516903
ALIVITLSVF	10	Unmodified	_ALIVITLSVF_					0	0	0		nc|ENSG00000164035|Q9ULC0-3|EMCN;ENSG00000164035|ENST00000296420|EMCN	nc|ENSG00000164035|Q9ULC0-3|EMCN	nc|ENSG00000164035|Q9ULC0-3|EMCN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3272094726562	2	538.341718	1074.66888	1.7892	0.00096319	-1.3436	-0.00072331	0.4456	0.00023989	538.3406187359341	100.64	0.40244	100.98	100.73	101.14	0.34591					13	9	3	0	0	0	0.37624	1	12252	12252		44.117	18.667	1	145250			1216	5904	857	858	1469	1469					0.13453534210702855
ALIVTPLIS	9	Unmodified	_ALIVTPLIS_					0	0	0			REV__ENST00000559814.5_1_15:29346087-29400775:+|nuORF	REV__ENST00000559814.5_1_15:29346087-29400775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.798828125	2	463.799686	925.584819	0.23374	0.00010841	1.7317	0.00080317	1.9655	0.00091158	463.8003055874184	41.421	1.4891	41.495	41.009	42.498	0.073418					84	40	3	0	0	0	0.64922	1	2678	2678		44.117	0	1	378670	+		1217	16284	858	859	1470	1470					0.11905003113804469
ALIVTPLIS	9	Unmodified	_ALIVTPLIS_					0	0	0			REV__ENST00000559814.5_1_15:29346087-29400775:+|nuORF	REV__ENST00000559814.5_1_15:29346087-29400775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.80023193359375	2	463.799686	925.584819	-0.080206	-3.7199E-05	1.9522	0.00090541	1.8719	0.00086821	463.80040731335265	41.41	1.3196	41.365	40.954	42.273	-0.045467					80	38	3	0	0	0	0.7932	1	2707	2707		23.042	0	1	417210	+		1218	16284	858	859	1471	1471					0.11905003113804469
ALKAVVRL	8	Unmodified	_ALKAVVRL_					0	0	0		ENST00000566016.5_1_16:46637844-46655271:-|nuORF;ENSG00000171241|ENST00000303383|SHCBP1	ENST00000566016.5_1_16:46637844-46655271:-|nuORF	ENST00000566016.5_1_16:46637844-46655271:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.30023193359375	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.81724	1	6678	6678		14.664	5.1935	1	1852500			1219	6652	859	860	1472	1472					0.14627262273359065
ALKDLKKSN	9	Unmodified	_ALKDLKKSN_					0	0	0		ENSG00000118492|ENST00000397944|ADGB	ENSG00000118492|ENST00000397944|ADGB	ENSG00000118492|ENST00000397944|ADGB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.8074951171875	2	508.808574	1015.60259	-0.055595	-2.8287E-05	-1.6183	-0.00082341	-1.6739	-0.0008517	508.8077132921667	83.422	2.5883	83.489	82.396	84.985	0.066719					89	59	2	0	0	0	0.78528	1	8284	8284		29.17	0.020503	1	2642300			1220	3032	860	861	1473	1473					0.09541718368654983
ALKDLKKSN	9	Unmodified	_ALKDLKKSN_					0	0	0		ENSG00000118492|ENST00000397944|ADGB	ENSG00000118492|ENST00000397944|ADGB	ENSG00000118492|ENST00000397944|ADGB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.8074951171875	2	508.808574	1015.60259	-0.40009	-0.00020357	-1.3872	-0.00070582	-1.7873	-0.00090939	508.80782145253374	83.116	1.7458	83.281	82.603	84.348	0.1651					72	40	2	0	0	0	0.7932	1	8015	8015		24.519	0.31644	1	4136400			1221	3032	860	861	1474	1474					0.09541718368654983
ALKDLKKSN	9	Unmodified	_ALKDLKKSN_					0	0	0		ENSG00000118492|ENST00000397944|ADGB	ENSG00000118492|ENST00000397944|ADGB	ENSG00000118492|ENST00000397944|ADGB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.8075866699219	2	508.808574	1015.60259	-1.4188	-0.00072192	-0.25381	-0.00012914	-1.6726	-0.00085106	508.8083690833738	83.198	1.9743	83.336	82.638	84.612	0.13811					103	45	4	0	0	0	0.7932	1	7995	7995		24.519	0.31644	1	3643200			1222	3032	860	861	1475	1475					0.09541718368654983
ALKEKKKKRT	10	Unmodified	_ALKEKKKKRT_					0	0	0		nc|ENSG00000146707|Q6PJE2-5|POMZP3;ENSG00000146707|ENST00000310842|POMZP3;ENSG00000272391|ENST00000615331|POM121C;nc|ENSG00000272391|A8CG34|POM121C	nc|ENSG00000146707|Q6PJE2-5|POMZP3	nc|ENSG00000146707|Q6PJE2-5|POMZP3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.4033203125	2	615.406247	1228.79794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.182	1	72.262	71.762	72.762	0.080032								0	0	0	0.45132	1	6577	6577		18.262	6.0552	1				1223	4856	861	862	1476	1476					0.19269308893490233
ALKENKSLQ	9	Unmodified	_ALKENKSLQ_					0	0	0		nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1;ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1	nc|ENSG00000173230|Q14789-4|GOLGB1	nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.7984619140625	2	515.798206	1029.58186	-0.0063158	-3.2577E-06	0.11037	5.6928E-05	0.10405	5.3671E-05	515.7979776623419	22.5	0.57006	22.441	22.217	22.787	-0.058668					43	21	3	0	0	0	0.71772	1	733	733		39.253	4.1008	1	61606			1224	6843	862	863	1477	1477					0.06825127989009161
ALKFIDRK	8	Unmodified	_ALKFIDRK_					0	0	0		ENST00000376964.3_1_X:47516580-47516661:-|nuORF;ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT	ENST00000376964.3_1_X:47516580-47516661:-|nuORF	ENST00000376964.3_1_X:47516580-47516661:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.8090515136719	2	495.808377	989.6022	-0.65934	-0.00032691	0.66803	0.00033121	0.008687	4.3071E-06	495.80857590328196	38.133	0.74035	38.472	38.154	38.894	0.33957					39	18	3	0	0	0	0.5397	1	3111	3111		73.975	2.679	1	987110			1225	3464	863	864	1478	1478					0.10698343439469227
ALKFIDRK	8	Unmodified	_ALKFIDRK_					0	0	0		ENST00000376964.3_1_X:47516580-47516661:-|nuORF;ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT	ENST00000376964.3_1_X:47516580-47516661:-|nuORF	ENST00000376964.3_1_X:47516580-47516661:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.80902099609375	2	495.808377	989.6022	-0.27701	-0.00013734	0.314	0.00015569	0.036991	1.834E-05	495.8083736060951	37.952	0.61994	38.474	38.21	38.83	0.52235					41	15	4	0	0	0	0.5397	1	3113	3113		73.975	2.679	1	880750			1226	3464	863	864	1479	1479					0.10698343439469227
ALKGNRVL	8	Unmodified	_ALKGNRVL_					0	0	0			REV__nc|ENSG00000133710|Q9NQ38-2|SPINK5	REV__nc|ENSG00000133710|Q9NQ38-2|SPINK5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.9134216308594	2	435.779619	869.544686	0.0014637	6.3787E-07	-0.3042	-0.00013257	-0.30274	-0.00013193	435.779377046602	33.02	0.32131	33.023	32.85	33.171	0.0030785					9	6	2	0	0	0	0.4196	1	1897	1897		20.482	10.297	1	13817	+		1227	19092	864	865	1480	1480					0.10469501233899337
ALKGSVLAQV	10	Unmodified	_ALKGSVLAQV_					0	0	0			REV__ENSG00000108671|ENST00000261712|PSMD11	REV__ENSG00000108671|ENST00000261712|PSMD11	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.2927551269531	2	493.305667	984.596781	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.43	1	110.5	110	111	0.068001								0	0	0	0.45132	1	13408	13408		42.864	11.334	1		+		1228	17726	865	866	1481	1481					0.10386619857001733
ALKIKLTNKH	10	Unmodified	_ALKIKLTNKH_					0	0	0		ENST00000468868.1_1_7:48017962-48019116:-|nuORF;nc|ENSG00000136273|O60921-2|HUS1;ENSG00000136273|ENST00000258774|HUS1	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.3761596679688	2	583.374415	1164.73428	-0.45026	-0.00026267	4.1254	0.0024066	3.6751	0.002144	583.376632963045	43.234	2.1571	43.207	42.716	44.873	-0.026764					170	50	4	0	0	0	0.80179	2	3318	3294;3318		39.253	5.0803	1	3607200			1229	4101	866	867	1482;1483	1483					0.1584994845638903
ALKIKLTNKH	10	Unmodified	_ALKIKLTNKH_					0	0	0		ENST00000468868.1_1_7:48017962-48019116:-|nuORF;nc|ENSG00000136273|O60921-2|HUS1;ENSG00000136273|ENST00000258774|HUS1	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.3757934570312	2	583.374415	1164.73428	-0.64745	-0.00037771	4.2612	0.0024859	3.6137	0.0021082	583.3767422613904	43.246	1.3886	43.21	42.756	44.144	-0.035816					107	32	4	0	0	0	0.70553	3	3412	3364;3388;3412		44.377	7.4796	1	3509500			1230	4101	866	867	1484;1485;1486	1486					0.1584994845638903
ALKIKLTNKH	10	Unmodified	_ALKIKLTNKH_					0	0	0		ENST00000468868.1_1_7:48017962-48019116:-|nuORF;nc|ENSG00000136273|O60921-2|HUS1;ENSG00000136273|ENST00000258774|HUS1	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	583.374415	1164.73428	-1.1522	-0.00067217	5.1161	0.0029846	3.9638	0.0023124	583.3771617398204	43.01	1.5181	43.01	42.679	44.197	0	-0.18546	0.00078379	NaN	44.377	107	36	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1963700			1231	4101	866	867							0.1584994845638903
ALKIKLTNKH	10	Unmodified	_ALKIKLTNKH_					0	0	0		ENST00000468868.1_1_7:48017962-48019116:-|nuORF;nc|ENSG00000136273|O60921-2|HUS1;ENSG00000136273|ENST00000258774|HUS1	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	583.374415	1164.73428	0.63304	0.0003693	3.8724	0.002259	4.5054	0.0026283	583.3762395325247	43.321	1.4604	43.326	42.806	44.266	0.0057487	0.13089	-0.0006673	NaN	44.377	98	36	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	987690			1232	4101	866	867							0.1584994845638903
ALKIKLTNKH	10	Unmodified	_ALKIKLTNKH_					0	0	0		ENST00000468868.1_1_7:48017962-48019116:-|nuORF;nc|ENSG00000136273|O60921-2|HUS1;ENSG00000136273|ENST00000258774|HUS1	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	583.374415	1164.73428	0.36537	0.00021315	4.0394	0.0023565	4.4048	0.0025696	583.3763820134662	43.139	1.303	43.196	42.837	44.14	0.056744	0.00080586	-0.00047236	NaN	44.377	87	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1028600			1233	4101	866	867							0.1584994845638903
ALKIKLTNKH	10	Unmodified	_ALKIKLTNKH_					0	0	0		ENST00000468868.1_1_7:48017962-48019116:-|nuORF;nc|ENSG00000136273|O60921-2|HUS1;ENSG00000136273|ENST00000258774|HUS1	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	ENST00000468868.1_1_7:48017962-48019116:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	583.374415	1164.73428	0.24782	0.00014457	4.0369	0.002355	4.2847	0.0024996	583.3764276973402	43.162	1.4219	43.111	42.713	44.135	-0.050308	-0.084171	-0.0004753	NaN	44.377	94	34	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1282100			1234	4101	866	867							0.1584994845638903
ALKKEFIFRTT	11	Unmodified	_ALKKEFIFRTT_					0	0	0			REV__nc|ENSG00000176915|Q86XL3-2|ANKLE2	REV__nc|ENSG00000176915|Q86XL3-2|ANKLE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9324951171875	3	451.934484	1352.78162	-1.2127	-0.00054806	-2.8312	-0.0012795	-4.0439	-0.0018276	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.72892	1	10309	10309		26.75	4.1881	1	518100	+		1235	22156	867	868	1487	1487					0.1193418293673858
ALKKEFIFRTT	11	Unmodified	_ALKKEFIFRTT_					0	0	0			REV__nc|ENSG00000176915|Q86XL3-2|ANKLE2	REV__nc|ENSG00000176915|Q86XL3-2|ANKLE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9329528808594	3	451.934484	1352.78162	-1.2099	-0.00054677	-2.7663	-0.0012502	-3.9762	-0.001797	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.75457	1	10424	10424		21.032	4.3148	1	1176100	+		1236	22156	867	868	1488	1488					0.1193418293673858
ALKKSLELAF	10	Unmodified	_ALKKSLELAF_					0	0	0			REV__ENSG00000242550|ENST00000238508|SERPINB10	REV__ENSG00000242550|ENST00000238508|SERPINB10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.340087890625	2	560.342249	1118.66995	-1.1289	-0.00063255	-2.4697	-0.0013839	-3.5985	-0.0020164	560.3407299796369	89.624	3.285	89.693	87.185	90.47	0.068703					185	76	4	0	0	0	0.85981	1	9115	9115		35.152	7.2698	1	1038600	+		1237	23832	868	869	1489	1489					0.11535748579603933
ALKKTNKQT	9	Unmodified	_ALKKTNKQT_					0	0	0		nc|ENSG00000186960|Q86U37|LINC01551;ENST00000399387.8_1_14:29242013-29261464:+|nuORF	nc|ENSG00000186960|Q86U37|LINC01551	nc|ENSG00000186960|Q86U37|LINC01551	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.311767578125	2	516.314023	1030.61349	-0.63194	-0.00032628	1.5468	0.00079865	0.9149	0.00047237	516.3149967454959	103.62	1.1732	103.62	103.18	104.36	0					52	28	2	0	0	0	0.78124	1	10655	10655		30.318	2.2362	1	411250			1238	11202	869	870	1490	1490					0.09941120742928433
ALKKVAVTTNN	11	Unmodified	_ALKKVAVTTNN_					0	0	0			REV__nc|ENSG00000198001|Q9NWZ3-2|IRAK4	REV__nc|ENSG00000198001|Q9NWZ3-2|IRAK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	579.8442993164062	2	579.845687	1157.67682	0.88069	0.00051066	-3.7088	-0.0021505	-2.8281	-0.0016399	579.843435527032	102.18	1.0887	102.31	101.93	103.02	0.13523					81	26	4	0	0	0	0.72106	1	10745	10745		28.081	2.9555	1	2076300	+		1239	23286	870	871	1491	1491					0.10429061460195044
ALKKVVGRVVF	11	Unmodified	_ALKKVVGRVVF_					0	0	0		ENSG00000168124|ENST00000304646|OR1F1	ENSG00000168124|ENST00000304646|OR1F1	ENSG00000168124|ENST00000304646|OR1F1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.8984680175781	3	405.936047	1214.78631	-1.8602	-0.00075511	-2.9885	-0.0012131	-4.8487	-0.0019683	405.9347562810296	63.129	0.82518	63.243	62.74	63.565	0.11388					55	41	2	0	0	0	0.1745	1	5531	5531		23.378	9.2919	1	126030			1240	6373	871	872	1492	1492					0.18751111870187742
ALKLHRTTL	9	Unmodified	_ALKLHRTTL_					0	0	0		nc|ENSG00000169064|A8MT70-3|ZBBX;nc|ENSG00000169064|A8MT70|ZBBX;ENSG00000169064|ENST00000675490|ZBBX	nc|ENSG00000169064|A8MT70-3|ZBBX	nc|ENSG00000169064|A8MT70-3|ZBBX	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3118286132812	2	526.832383	1051.65021	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.41	1	113.41	112.91	113.91	0								0	0	0	0.34348	1	11717	11717		16.473	3.514	1				1241	6466	872	873	1493	1493					0.12645417359499334
ALKLILCAFR	10	Unmodified	_ALKLILCAFR_					0	0	0			REV__ENST00000369063.7_1_6:107076967-107077027:-|nuORF	REV__ENST00000369063.7_1_6:107076967-107077027:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3568725585938	2	574.354637	1146.69472	0.5994	0.00034427	1.6073	0.00092315	2.2067	0.0012674	574.3554932610225	99.489	2.9336	99.712	98.122	101.06	0.22262					130	68	2	0	0	0	0.8651	1	10358	10358		25.574	0	1	294880	+		1242	25613	873	874	1494	1494					0.1272410518133711
ALKLMLVSL	9	Unmodified	_ALKLMLVSL_					0	0	0			REV__nc|ENSG00000168546|O00451-2|GFRA2	REV__nc|ENSG00000168546|O00451-2|GFRA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3006591796875	2	494.317189	986.619824	0.76464	0.00037797	-2.9251	-0.0014459	-2.1604	-0.0010679	494.31512473984577	97.123	1.0964	97.286	96.922	98.018	0.16316					46	25	3	0	0	0	0.20789	1	10105	10105		10.866	0	1	553650	+		1243	21500	874	875	1495	1495					0.12597922650093096
ALKNPPINTK	10	Unmodified	_ALKNPPINTK_					0	0	0		ENST00000602490.1_1_1:183602183-183602348:-|nuORF;ENST00000462965.1_1_1:183596669-183602348:-|nuORF;ENSG00000162704|ENST00000359856|ARPC5;nc|ENSG00000162704|O15511-2|ARPC5	ENST00000602490.1_1_1:183602183-183602348:-|nuORF	ENST00000602490.1_1_1:183602183-183602348:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.329345703125	2	548.329673	1094.64479	-1.2887	-0.00070661	1.1439	0.00062723	-0.14475	-7.9373E-05	548.3301434974741	27.778	1.2267	27.681	27.316	28.542	-0.096945					87	28	5	0	0	0	0.030677	5	1618	1618;1630;1642;1654;1666		114.89	37.577	1	1674600			1244	5721	875	876	1496;1497;1498;1499;1500	1496					0.10125693777035849
ALKNPPINTK	10	Unmodified	_ALKNPPINTK_					0	0	0		ENST00000602490.1_1_1:183602183-183602348:-|nuORF;ENST00000462965.1_1_1:183596669-183602348:-|nuORF;ENSG00000162704|ENST00000359856|ARPC5;nc|ENSG00000162704|O15511-2|ARPC5	ENST00000602490.1_1_1:183602183-183602348:-|nuORF	ENST00000602490.1_1_1:183602183-183602348:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.3294677734375	2	548.329673	1094.64479	1.0295	0.00056451	-1.1544	-0.00063301	-0.12493	-6.8502E-05	548.3288715539239	27.829	1.1657	27.575	27.152	28.318	-0.25465					90	27	5	0	0	0	7.4855E-07	7	1672	1627;1637;1648;1660;1672;1684;1706		150.36	62.665	1	1628800			1245	5721	875	876	1501;1502;1503;1504;1505;1506;1507	1505					0.10125693777035849
ALKNVKKVPH	10	Unmodified	_ALKNVKKVPH_					0	0	0		nc|ENSG00000138593|Q93073-2|SECISBP2L;ENSG00000138593|ENST00000559471|SECISBP2L	nc|ENSG00000138593|Q93073-2|SECISBP2L	nc|ENSG00000138593|Q93073-2|SECISBP2L	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3639526367188	2	567.361308	1132.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.777	1	63.9	63.4	64.4	0.12252								0	0	0	0.45132	1	5599	5599		20.947	0	1				1246	4303	876	877	1508	1508					0.14701679284939928
ALKPYPPASL	10	Unmodified	_ALKPYPPASL_					0	0	0			REV__ENST00000503276.2_1_17:48049963-48050176:+|nuORF	REV__ENST00000503276.2_1_17:48049963-48050176:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7933349609375	2	528.808042	1055.60153	1.0721	0.00056694	-2.8535	-0.001509	-1.7814	-0.00094203	529.3095113440299	35.932	1.2798	36.179	35.82	37.1	0.24769					37	31	2	0	0	0	0.37624	1	2750	2750		74.255	0	1	94834	+		1247	27844	877	878	1509	1509					0.075955039997325
ALKQIHKSK	9	Unmodified	_ALKQIHKSK_					0	0	0			REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.8292846679688	2	526.832383	1051.65021	-0.037108	-1.955E-05	-1.9225	-0.0010129	-1.9596	-0.0010324	526.8308845773203	97.276	1.1558	97.339	96.565	97.721	0.062233					68	26	4	0	0	0	0.76255	1	10219	10219		35.618	3.6634	1	173940	+		1248	29561	878	879	1510	1510					0.12645417359499334
ALKQIHKSK	9	Unmodified	_ALKQIHKSK_					0	0	0			REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	526.832383	1051.65021	-0.037108	-1.955E-05	-1.9225	-0.0010129	-1.9596	-0.0010324	526.8308845773203	97.276	1.1558	97.339	96.565	97.721	0.062233	0.35151	0.0010504	NaN	35.618	68	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173940	+		1249	29561	878	879							0.12645417359499334
ALKQIHKSK	9	Unmodified	_ALKQIHKSK_					0	0	0			REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	526.832383	1051.65021	2.682	0.001413	-4.7801	-0.0025183	-2.0981	-0.0011053	526.8293161704577	97.046	1.0166	96.99	96.586	97.603	-0.055672	0.0027947	-0.0019605	NaN	35.618	69	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153490	+		1250	29561	878	879							0.12645417359499334
ALKQIHKSK	9	Unmodified	_ALKQIHKSK_					0	0	0			REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	526.832383	1051.65021	1.2423	0.00065448	-3.4546	-0.00182	-2.2124	-0.0011655	526.8302138966241	96.825	1.1837	96.873	96.312	97.495	0.047798	-0.11439	-0.00056392	NaN	35.618	67	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	207380	+		1251	29561	878	879							0.12645417359499334
ALKQIHKSK	9	Unmodified	_ALKQIHKSK_					0	0	0			REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	526.832383	1051.65021	-0.10755	-5.666E-05	-2.2977	-0.0012105	-2.4052	-0.0012671	526.8310343663406	96.513	0.98521	96.744	96.225	97.21	0.23103	-0.24339	0.00065516	NaN	35.618	49	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	163520	+		1252	29561	878	879							0.12645417359499334
ALKQIHKSK	9	Unmodified	_ALKQIHKSK_					0	0	0			REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	526.832383	1051.65021	0.7914	0.00041694	-3.3791	-0.0017802	-2.5877	-0.0013633	526.8305481250547	96.491	1.027	96.654	96.233	97.26	0.16317	-0.33274	-0.00048429	NaN	35.618	50	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127330	+		1253	29561	878	879							0.12645417359499334
ALKQIHKSK	9	Unmodified	_ALKQIHKSK_					0	0	0			REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	526.832383	1051.65021	-1.5276	-0.00080477	-0.61812	-0.00032565	-2.1457	-0.0011304	526.8319357528687	96.646	0.95231	96.849	96.317	97.27	0.20242	-0.13834	0.0024248	NaN	35.618	44	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128700	+		1254	29561	878	879							0.12645417359499334
ALKQIHKSK	9	Unmodified	_ALKQIHKSK_					0	0	0			REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	526.832383	1051.65021	1.9648	0.0010351	-4.76	-0.0025077	-2.7952	-0.0014726	526.8297647951539	96.625	0.94673	97.03	96.59	97.536	0.40498	0.04313	-0.0019393	NaN	35.618	41	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	306050	+		1255	29561	878	879							0.12645417359499334
ALKQIHKSK	9	Unmodified	_ALKQIHKSK_					0	0	0			REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|137|3|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	526.832383	1051.65021	1.0972	0.00057804	-3.7205	-0.0019601	-2.6233	-0.0013821	526.830321871478	96.731	0.99004	97.135	96.665	97.655	0.40451	0.14825	-0.00084406	NaN	35.618	48	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	346630	+		1256	29561	878	879							0.12645417359499334
ALKRAMPCNL	10	Unmodified	_ALKRAMPCNL_					0	0	0		ENST00000342308.9_1_20:5092240-5093697:-|nuORF;ENST00000202834.11_1_20:5090032-5093697:-|nuORF	ENST00000342308.9_1_20:5092240-5093697:-|nuORF	ENST00000342308.9_1_20:5092240-5093697:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.8046875	2	558.804454	1115.59435	-0.74661	-0.00041721	0.029475	1.6471E-05	-0.71713	-0.00040074	558.8044185395656	31.08	0.50536	31.098	30.879	31.384	0.018362					21	12	3	0	0	0	0.86763	1	1655	1655		26.693	2.1737	1	46336			1257	9097	879	880	1511	1511					0.04118124856040595
ALKSPLVP	8	Unmodified	_ALKSPLVP_					0	0	0		ENST00000494655.5_1_3:46966643-47018222:-|nuORF	ENST00000494655.5_1_3:46966643-47018222:-|nuORF	ENST00000494655.5_1_3:46966643-47018222:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.26715087890625	2	412.765646	823.516739	1.2445	0.00051368	-1.8023	-0.00074392	-0.55779	-0.00023024	412.76609709283645	41.289	1.0546	41.296	40.74	41.795	0.0065727					35	27	2	0	0	0	0.81548	1	3033	3033		20.482	0	1	169780			1258	12753	880	881	1512	1512					0.0979217825380374
ALKTGIVAK	9	Unmodified	_ALKTGIVAK_					0	0	0		ENSG00000123144|ENST00000242784|TRIR	ENSG00000123144|ENST00000242784|TRIR	ENSG00000123144|ENST00000242784|TRIR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.79742431640625	2	450.797478	899.580402	-0.75505	-0.00034037	0.57321	0.0002584	-0.18184	-8.1972E-05	450.7976230118852	26.272	1.8593	26.015	25.383	27.243	-0.25721					83	41	4	0	0	0	2.0213E-05	4	1432	1420;1432;1444;1456		154.12	38.659	1	2701200			1259	3261	881	882	1513;1514;1515;1516	1514					0.12659538690900263
ALKTGIVAK	9	Unmodified	_ALKTGIVAK_					0	0	0		ENSG00000123144|ENST00000242784|TRIR	ENSG00000123144|ENST00000242784|TRIR	ENSG00000123144|ENST00000242784|TRIR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.7974853515625	2	450.797478	899.580402	2.3095	0.0010411	-2.5003	-0.0011271	-0.19075	-8.599E-05	450.7962486528249	26.279	1.494	25.939	25.573	27.067	-0.34035					75	33	4	0	0	0	0.021781	5	1440	1428;1440;1453;1466;1479		124.08	21.307	1	2769400			1260	3261	881	882	1517;1518;1519;1520;1521	1518					0.12659538690900263
ALKVLAVR	8	Unmodified	_ALKVLAVR_					0	0	0			REV__nc|ENSG00000205494|A6NMU1|OR52A4P	REV__nc|ENSG00000205494|A6NMU1|OR52A4P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3000183105469	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.80706	1	6874	6874		19.36	1.0356	1	1852500	+		1261	30171	882	883	1522	1522					0.14627262273370434
ALLACYVR	8	Carbamidomethyl (C)	_ALLAC(Carbamidomethyl (C))YVR_	ALLAC(1)YVR		ALLAC(47)YVR		0	1	0			REV__nc|ENSG00000164403|Q2M3G4-2|SHROOM1	REV__nc|ENSG00000164403|Q2M3G4-2|SHROOM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.267578125	2	483.265487	964.516422	1.0064	0.00048635	3.2494	0.0015703	4.2558	0.0020567	483.26673663528084	16.049	0.20535	16.127	16.02	16.226	0.077959					12	8	2	0	0	0	0.92176	1	70	70		46.766	9.6073	1	37043	+		1262	21079	883	884	1523	1523	260				0.032744352623012674
ALLAGALAAY	10	Unmodified	_ALLAGALAAY_					0	0	0		ENSG00000099337|ENST00000263372|KCNK6	ENSG00000099337|ENST00000263372|KCNK6	ENSG00000099337|ENST00000263372|KCNK6	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.2421569824219	2	467.273835	932.533118	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.135	1	32.246	31.746	32.746	0.11117								0	0	0	0.45132	1	1498	1498		26.796	6.3143	1				1263	1758	884	885	1524	1524					0.06415259419884478
ALLAKVQM	8	Unmodified	_ALLAKVQM_					0	0	0		ENSG00000139865|ENST00000553443|TTC6;nc|ENSG00000139865|Q86TZ1-2|TTC6;nc|ENSG00000139865|Q86TZ1|TTC6	ENSG00000139865|ENST00000553443|TTC6	ENSG00000139865|ENST00000553443|TTC6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2642517089844	2	437.264956	872.515359	2.8534	0.0012477	-1.6442	-0.00071895	1.2092	0.00052875	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.86288	1	1526	1526		26.796	6.3143	1	21873000			1264	4401	885	886	1525	1525					0.0740022089340755
ALLAQAALL	9	Unmodified	_ALLAQAALL_					0	0	0		ENSG00000167595|ENST00000646935|PROSER3;nc|ENSG00000167595|Q2NL68|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2844543457031	2	442.284203	882.553853	-1.4163	-0.00062639	1.7479	0.00077308	0.33165	0.00014668	442.2848988833296	48.138	1.9507	48.607	47.971	49.922	0.46941					81	48	3	0	0	0	0.43338	1	4608	4608		55.504	0.73953	1	2545800			1265	6303	886	887	1526	1526					0.10787849799555715
ALLARPEVQ	9	Unmodified	_ALLARPEVQ_					0	0	0		ENSG00000132622|ENST00000254963|HSPA12B	ENSG00000132622|ENST00000254963|HSPA12B	ENSG00000132622|ENST00000254963|HSPA12B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.7955322265625	2	498.795466	995.57638	-0.00081578	-4.0691E-07	1.504	0.0007502	1.5032	0.00074979	498.7960129710008	20.608	0.77453	19.979	19.718	20.493	-0.6296					40	18	3	0	0	0	0.78058	1	676	676		30.504	2.6214	1	174900			1266	3810	887	888	1527	1527					0.07841449197189831
ALLASLGSQKL	11	Unmodified	_ALLASLGSQKL_					0	0	0		ENST00000465271.5_1_1:224564849-224564981:+|nuORF	ENST00000465271.5_1_1:224564849-224564981:+|nuORF	ENST00000465271.5_1_1:224564849-224564981:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.836181640625	2	550.837331	1099.66011	0.32251	0.00017765	-0.22539	-0.00012415	0.097116	5.3495E-05	550.837103460483	24.46	0.63952	24.414	24.117	24.757	-0.04598					22	13	2	0	0	0	0.61369	1	961	961		42.864	3.6114	1	49837			1267	12108	888	889	1528	1528					0.11426560574250288
ALLATLAAYL	10	Unmodified	_ALLATLAAYL_					0	0	0			REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.3109436035156	2	510.310418	1018.60628	0.61904	0.0003159	-0.34976	-0.00017848	0.26928	0.00013742	510.3100260358087	79.225	0.7446	79.363	79.045	79.789	0.13883					63	24	4	0	0	0	0.71042	1	7496	7496		44.117	3.3386	1	424560	+		1268	18735	889	890	1529	1529					0.09772388142516775
ALLAWRKV	8	Unmodified	_ALLAWRKV_					0	0	0		ENST00000577066.2_1_17:79007042-79008186:-|nuORF	ENST00000577066.2_1_17:79007042-79008186:-|nuORF	ENST00000577066.2_1_17:79007042-79008186:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8054504394531	2	478.805637	955.596721	-2.669	-0.0012779	3.4642	0.0016587	0.7952	0.00038075	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.81548	2	2686	2686;2904		20.482	1.7049	1	370420			1269	14062	890	891	1530;1531	1530					0.11714664647661266
ALLCRKKP	8	Unmodified	_ALLCRKKP_					0	0	0			REV__ENSG00000204272|ENST00000374922|NBDY	REV__ENSG00000204272|ENST00000374922|NBDY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.79071044921875	2	464.791672	927.568792	-1.14	-0.00052988	-0.92174	-0.00042842	-2.0618	-0.00095829	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.81548	1	1732	1732		20.482	0	1	286820	+		1270	23476	891	892	1532	1532					0.10211018395909832
ALLDGSNVVFK	11	Unmodified	_ALLDGSNVVFK_					0	0	0		ENST00000395134.3_1_6:33257633-33258228:+|nuORF;ENST00000491382.1_1_6:33257633-33258228:+|nuORF;ENSG00000204220|ENST00000374606|PFDN6	ENST00000395134.3_1_6:33257633-33258228:+|nuORF	ENST00000395134.3_1_6:33257633-33258228:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	581.8278198242188	2	581.826963	1161.63937	-1.4731	-0.00085708	1.6447	0.00095695	0.17166	9.9877E-05	581.8277102940065	63.891	0.77088	64.278	63.962	64.732	0.38681					48	17	4	0	0	0	0.1214	2	6887	6887;6899		88.177	13.134	1	445350			1271	8423	892	893	1533;1534	1533					0.06501970194563
ALLDGSNVVFK	11	Unmodified	_ALLDGSNVVFK_					0	0	0		ENST00000395134.3_1_6:33257633-33258228:+|nuORF;ENST00000491382.1_1_6:33257633-33258228:+|nuORF;ENSG00000204220|ENST00000374606|PFDN6	ENST00000395134.3_1_6:33257633-33258228:+|nuORF	ENST00000395134.3_1_6:33257633-33258228:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.8265380859375	2	581.826963	1161.63937	-0.34216	-0.00019908	0.16231	9.4435E-05	-0.17985	-0.00010464	581.8269564714582	63.741	0.84967	64.296	64.003	64.853	0.5545					41	19	3	0	0	0	0.3308	1	6908	6908		66.962	6.8437	1	419760			1272	8423	892	893	1535	1535					0.06501970194563
ALLDKEPQKMI	11	Unmodified	_ALLDKEPQKMI_					0	0	0		nc|ENSG00000132321|Q86XH1-2|IQCA1;nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1	nc|ENSG00000132321|Q86XH1-2|IQCA1	nc|ENSG00000132321|Q86XH1-2|IQCA1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3739624023438	2	643.362856	1284.71116	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.91	1	114.89	114.39	115.39	-0.02433								0	0	0	0.56276	1	12735	12735		31.53	2.3598	1				1273	3780	893	894	1536	1536					0.08019141556769682
ALLDKLYAL	9	Unmodified	_ALLDKLYAL_					0	0	0		ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.31072998046875	2	510.310418	1018.60628	-0.38342	-0.00019566	0.58095	0.00029646	0.19753	0.0001008	510.3105307146198	79.291	0.70142	79.422	79.091	79.792	0.13086					56	21	3	0	0	0	0.14236	1	7517	7517		85.161	2.9203	1	423200			1274	7171	894	895	1537	1537					0.09772388142516775
ALLDKLYAL	9	Unmodified	_ALLDKLYAL_					0	0	0		ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.3106384277344	2	510.310418	1018.60628	0.61904	0.0003159	-0.34976	-0.00017848	0.26928	0.00013742	510.3100260358087	79.225	0.7446	79.363	79.045	79.789	0.13883					63	24	4	0	0	0	0.18338	2	7515	7507;7515		77.318	10.846	1	424560			1275	7171	894	895	1538;1539	1539					0.09772388142516775
ALLDKLYAL	9	Unmodified	_ALLDKLYAL_					0	0	0		ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.31109619140625	2	510.310418	1018.60628	-1.2754	-0.00065085	1.5317	0.00078164	0.25629	0.00013079	510.3110295003225	79.313	0.80144	79.412	79.114	79.915	0.098694					56	25	3	0	0	0	0.19437	1	7485	7485		75.043	0.78827	1	419210			1276	7171	894	895	1540	1540					0.09772388142516775
ALLDKLYAL	9	Unmodified	_ALLDKLYAL_					0	0	0		ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	510.310418	1018.60628	-0.19709	-0.00010058	-0.44566	-0.00022742	-0.64275	-0.000328	510.3108965430151	79.341	0.27641	79.395	79.228	79.505	0.053841	-0.0030764	-0.0011419	NaN	85.161	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31021			1277	7171	894	895							0.09772388142516775
ALLDPLIK	8	Unmodified	_ALLDPLIK_					0	0	0			REV__ENSG00000103047|ENST00000261778|TANGO6	REV__ENSG00000103047|ENST00000261778|TANGO6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7882385253906	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.81548	1	3242	3242		20.482	0	1	403970	+		1278	17382	895	896	1541	1541					0.11308733942337312
ALLEAPQVPL	10	Unmodified	_ALLEAPQVPL_					0	0	0			REV__ENSG00000168255|ENST00000513506|POLR2J3	REV__ENSG00000168255|ENST00000513506|POLR2J3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.81640625	2	525.813325	1049.6121	2.4203	0.0012726	1.7287	0.00090898	4.149	0.0021816	525.8148344392195	106.1	1.1594	106.23	105.62	106.78	0.12742					80	45	3	0	0	0	0.77314	1	12957	12957		40.778	1.5253	1	143960	+		1279	21472	896	897	1542	1542					0.08927486654192762
ALLEFQFI	8	Unmodified	_ALLEFQFI_					0	0	0		nc|ENSG00000168016|O15050|TRANK1;ENSG00000168016|ENST00000645898|TRANK1	nc|ENSG00000168016|O15050|TRANK1	nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.77301025390625	2	490.776211	979.537869	-0.69441	-0.0003408	-3.814	-0.0018718	-4.5084	-0.0022126	490.7741775274613	60.228	0.53955	60.781	60.463	61.003	0.55323					26	14	2	0	0	0	0.87922	1	6411	6411		31.955	2.1133	1	332750			1280	6357	897	898	1543	1543					0.04728143562670084
ALLEGPSLIL	10	Unmodified	_ALLEGPSLIL_					0	0	0			REV__ENSG00000167625|ENST00000301215|ZNF526	REV__ENSG00000167625|ENST00000301215|ZNF526	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.316650390625	2	513.3157	1024.61685	-0.86606	-0.00044456	1.9618	0.001007	1.0958	0.00056247	513.3165332025184	43.367	1.6866	43.367	42.894	44.58	0.00016785					82	40	3	0	0	0	0.71042	1	3340	3340		44.117	1.7207	1	411860	+		1281	21407	898	899	1544	1544					0.10552370796949617
ALLFALALQTG	11	Unmodified	_ALLFALALQTG_					0	0	0		ENSG00000085741|ENST00000322563|WNT11	ENSG00000085741|ENST00000322563|WNT11	ENSG00000085741|ENST00000322563|WNT11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.3324584960938	2	559.334424	1116.6543	-1.7321	-0.00096881	0.93943	0.00052546	-0.79264	-0.00044335	559.3348687182564	42.308	0.48847	43.005	42.81	43.299	0.69754					21	11	2	0	0	0	0.73893	1	3783	3783		24.519	0.99649	1	704110			1282	1539	899	900	1545	1545					0.10063462062521467
ALLGGLLHH	9	Unmodified	_ALLGGLLHH_					0	0	0			REV__ENST00000369037.8_1_6:107655524-107780637:-|nuORF	REV__ENST00000369037.8_1_6:107655524-107780637:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7777099609375	2	465.779619	929.544686	-0.22002	-0.00010248	-4.0013	-0.0018637	-4.2213	-0.0019662	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.72098	1	9629	9629		39.021	1.993	1	1042300	+		1283	25612	900	901	1546	1546					0.07709501233898663
ALLGHTDTV	9	Unmodified	_ALLGHTDTV_					0	0	0		ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3	ENSG00000163625|ENST00000295888|WDFY3	ENSG00000163625|ENST00000295888|WDFY3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.80023193359375	2	463.750724	925.486896	0.23174	0.00010747	1.9663	0.00091189	2.1981	0.0010194	463.750020305319	41.339	0.30803	41.412	41.242	41.55	0.073414					9	7	2	0	0	0	0.20789	1	2688	2688		35.618	18.253	1	46628			1284	5839	901	902	1547	1547					0.021171945177911766
ALLGKVLR	8	Unmodified	_ALLGKVLR_					0	0	0		ENSG00000182218|ENST00000330710|HHIPL1;nc|ENSG00000182218|Q96JK4-2|HHIPL1	ENSG00000182218|ENST00000330710|HHIPL1	ENSG00000182218|ENST00000330710|HHIPL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3001403808594	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82419	1	8405	8405		13.775	0	1	5485100			1285	7434	902	903	1548	1548					0.14627262273370434
ALLGMYSK	8	Unmodified	_ALLGMYSK_					0	0	0		L1MA6_dup4560|chr14:35318355-35318966:-|1.2222944281338102|0.373403079947223|1.71|63.0|3|1|sense	L1MA6_dup4560|chr14:35318355-35318966:-|1.2222944281338102|0.373403079947223|1.71|63.0|3|1|sense	L1MA6_dup4560|chr14:35318355-35318966:-|1.2222944281338102|0.373403079947223|1.71|63.0|3|1|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7881164550781	2	441.741314	881.468075	0.18682	8.2527E-05	2.8041	0.0012387	2.9909	0.0013212	441.7422819689941	39.132	0.25858	39.221	39.034	39.292	0.088375					8	6	2	0	0	0	0.4196	1	2384	2384		38.806	21.441	1	36023			1286	14565	903	904	1549	1549					0.022599416224011293
ALLHGFPK	8	Unmodified	_ALLHGFPK_					0	0	0			REV__ENST00000234590.8_1_1:8921306-8921417:-|nuORF	REV__ENST00000234590.8_1_1:8921306-8921417:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7879943847656	2	441.763438	881.512323	0.13579	5.9985E-05	4.3077	0.001903	4.4434	0.0019629	441.764897664217	37.912	0.70575	38.434	38.247	38.952	0.52235					34	17	3	0	0	0	0.4196	1	3163	3163		7.1934	0	1	268420	+		1287	24210	904	905	1550	1550					0.06682713830889497
ALLILGVSP	9	Unmodified	_ALLILGVSP_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7873840332031	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.7932	1	3002	3002		25.45	6.0902	1	12471000			1288	2096	905	906	1551	1551					0.11308733942325944
ALLILGVSP	9	Unmodified	_ALLILGVSP_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78741455078125	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.7932	1	3486	3486		25.45	4.9683	1	493390			1289	2096	905	906	1552	1552					0.11308733942325944
ALLILGVSP	9	Unmodified	_ALLILGVSP_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7878112792969	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.67235	1	2868	2868		42.474	7.2737	1	10128000			1290	2096	905	906	1553	1553					0.11308733942325944
ALLILGVSP	9	Unmodified	_ALLILGVSP_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.785888671875	2	441.786579	881.558604	-2.6056	-0.0011511	3.8386	0.0016959	1.233	0.00054472	441.7881605091801	40.922	2.2099	41.314	40.796	43.006	0.39209					179	59	5	0	0	0	0.67235	1	3499	3499		42.474	0	1	185320000			1291	2096	905	906	1554	1554					0.11308733942325944
ALLILGVSP	9	Unmodified	_ALLILGVSP_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7868347167969	2	441.786579	881.558604	-1.3207	-0.00058348	2.7134	0.0011988	1.3927	0.00061528	441.78767453164585	40.807	2.1151	41.396	40.908	43.023	0.58915					198	57	5	0	0	0	0.76996	2	3494	3494;3506		33.516	5.2613	1	200250000			1292	2096	905	906	1555;1556	1555					0.11308733942325944
ALLKFSEVI	9	Unmodified	_ALLKFSEVI_					0	0	0		ENSG00000075673|ENST00000381946|ATP12A;nc|ENSG00000075673|P54707-2|ATP12A	ENSG00000075673|ENST00000381946|ATP12A	ENSG00000075673|ENST00000381946|ATP12A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.3103942871094	2	510.310418	1018.60628	-0.38342	-0.00019566	0.58095	0.00029646	0.19753	0.0001008	510.3105307146198	79.291	0.70142	79.422	79.091	79.792	0.13086					56	21	3	0	0	0	0.35373	1	7525	7525		60.972	0	1	423200			1293	1340	906	907	1557	1557					0.09772388142516775
ALLKLIQQPQN	11	Unmodified	_ALLKLIQQPQN_					0	0	0		ENST00000566590.5_1_16:8807641-8875284:+|nuORF;ENST00000565671.1_1_16:8839919-8854000:+|nuORF;ENSG00000183044|ENST00000268251|ABAT	ENST00000566590.5_1_16:8807641-8875284:+|nuORF	ENST00000566590.5_1_16:8807641-8875284:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.385009765625	2	633.382437	1264.75032	0.48639	0.00030807	4.1073	0.0026015	4.5937	0.0029096	633.3849528535055	51.23	1.8238	51.28	50.541	52.365	0.049896					89	57	2	0	0	0	0.74405	1	4046	4046		14.137	0	1	205950			1294	13938	907	908	1558	1558					0.12853609902663266
ALLKNQRRAQR	11	Unmodified	_ALLKNQRRAQR_					0	0	0		ENSG00000151304|ENST00000339397|SRFBP1	ENSG00000151304|ENST00000339397|SRFBP1	ENSG00000151304|ENST00000339397|SRFBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9439392089844	3	451.944376	1352.8113	-0.61036	-0.00027585	-1.697	-0.00076695	-2.3073	-0.0010428	451.94349825987973	55.257	1.4276	55.22	54.668	56.095	-0.036823					123	46	4	0	0	0	0.74405	1	4636	4636		23.378	2.3457	1	459960			1295	5106	908	909	1559	1559					0.14900559725447238
ALLKPLSIPN	10	Unmodified	_ALLKPLSIPN_					0	0	0		ENSG00000172482|ENST00000307503|AGXT	ENSG00000172482|ENST00000307503|AGXT	ENSG00000172482|ENST00000307503|AGXT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.3399047851562	2	533.336967	1064.65938	3.0971	0.0016518	2.9068	0.0015503	6.0039	0.0032021	533.3384140007198	99.339	2.8367	99.285	98.69	101.53	-0.053741					182	66	5	0	0	0	0.86471	1	10720	10720		30.318	1.1477	1	3163800			1296	6773	909	910	1560	1560					0.12963765925201187
ALLLCIPGSA	10	Unmodified	_ALLLCIPGSA_					0	0	0			REV__nc|ENSG00000007541|Q9BRB3|PIGQ	REV__nc|ENSG00000007541|Q9BRB3|PIGQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27850341796875	2	479.275521	956.536489	-0.098426	-4.7173E-05	3.9538	0.001895	3.8554	0.0018478	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.85934	1	7932	7932		35.618	0.41757	1	1929800	+		1297	29672	910	911	1561	1561					0.05648186202256511
ALLLCIPGSA	10	Unmodified	_ALLLCIPGSA_					0	0	0			REV__nc|ENSG00000007541|Q9BRB3|PIGQ	REV__nc|ENSG00000007541|Q9BRB3|PIGQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2774658203125	2	479.275521	956.536489	0.53004	0.00025403	3.2196	0.0015431	3.7496	0.0017971	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.86718	1	8450	8450		27.882	1.0861	1	2070000	+		1298	29672	910	911	1562	1562					0.05648186202256511
ALLLGELGP	9	Unmodified	_ALLLGELGP_					0	0	0		nc|ENSG00000075826|Q9NQW1-5|SEC31B;ENSG00000075826|ENST00000370345|SEC31B;ENST00000484848.5_1_10:102255105-102258991:-|nuORF	nc|ENSG00000075826|Q9NQW1-5|SEC31B	nc|ENSG00000075826|Q9NQW1-5|SEC31B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7682189941406	2	441.768386	881.522219	-0.96184	-0.00042491	0.051785	2.2877E-05	-0.91005	-0.00040203	441.76839857902763	107.3	0.67591	107.3	106.93	107.61	0					35	15	3	0	0	0	0.77546	1	11152	11152		31.955	0	1	559720			1299	1344	911	912	1563	1563					0.07671857045613706
ALLLGELGP	9	Unmodified	_ALLLGELGP_					0	0	0		nc|ENSG00000075826|Q9NQW1-5|SEC31B;ENSG00000075826|ENST00000370345|SEC31B;ENST00000484848.5_1_10:102255105-102258991:-|nuORF	nc|ENSG00000075826|Q9NQW1-5|SEC31B	nc|ENSG00000075826|Q9NQW1-5|SEC31B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7683410644531	2	441.768386	881.522219	2.7351	0.0012083	-2.9605	-0.0013079	-0.22539	-9.957E-05	441.76685786355085	107.36	1.6234	107.32	106.14	107.77	-0.034134					55	37	2	0	0	0	0.7932	1	11873	11873		24.203	1.166	1	1711100			1300	1344	911	912	1564	1564					0.07671857045613706
ALLLGNFADE	10	Unmodified	_ALLLGNFADE_					0	0	0			REV__nc|ENSG00000111913|Q9Y4F9-2|RIPOR2	REV__nc|ENSG00000111913|Q9Y4F9-2|RIPOR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.7786254882812	2	531.776939	1061.53933	-0.43808	-0.00023296	-4.3256	-0.0023003	-4.7637	-0.0025332	532.2760550589101	57.177	0.37059	57.571	57.326	57.697	0.39407					16	8	2	0	0	0	0.37624	1	5911	5911		35.152	7.2698	1	139570	+		1301	17907	912	913	1565	1565					0.011017328607522359
ALLLGRTWP	9	Unmodified	_ALLLGRTWP_					0	0	0		ENST00000529281.5_1_11:102933090-102962462:-|nuORF;ENSG00000137692|ENST00000260247|DCUN1D5;ENST00000531571.5_1_11:102933090-102962381:-|nuORF	ENST00000529281.5_1_11:102933090-102962462:-|nuORF	ENST00000529281.5_1_11:102933090-102962462:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8085327148438	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.7932	1	4346	4346		24.203	1.1603	1	926440			1302	4225	913	914	1566	1566					0.0904234343945518
ALLLLCPGGG	10	Unmodified	_ALLLLCPGGG_					0	0	0		ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2636413574219	2	457.262413	912.510274	0.43756	0.00020008	3.6399	0.0016644	4.0774	0.0018645	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.70264	1	8493	8493		44.531	3.7529	1	4814400			1303	11549	914	915	1567	1567					0.05051917030777986
ALLLLCPGGG	10	Unmodified	_ALLLLCPGGG_					0	0	0		ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.263671875	2	457.262413	912.510274	0.72888	0.00033329	3.7293	0.0017053	4.4582	0.0020386	457.2639625766656	94.898	1.4046	95.33	94.801	96.206	0.4324					63	33	3	0	0	0	0.70264	1	11324	11324		44.531	0	1	601830			1304	11549	914	915	1568	1568					0.05051917030777986
ALLLLCPGGG	10	Unmodified	_ALLLLCPGGG_					0	0	0		ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	457.262413	912.510274	-1.0543	-0.00048207	5.6329	0.0025757	4.5786	0.0020936	457.264828131541	95.464	1.1692	95.464	95.008	96.177	0	0.14691	0.0011755	NaN	44.531	62	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	518470			1305	11549	914	915							0.05051917030777986
ALLLLCPGGG	10	Unmodified	_ALLLLCPGGG_					0	0	0		ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	457.262413	912.510274	-0.13058	-5.9708E-05	4.7707	0.0021815	4.6401	0.0021218	457.26443630735923	95.336	1.6028	95.404	94.882	96.485	0.068336	0.086881	0.00038708	NaN	44.531	92	37	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	838550			1306	11549	914	915							0.05051917030777986
ALLLLCPGGG	10	Unmodified	_ALLLLCPGGG_					0	0	0		ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	457.262413	912.510274	-1.1398	-0.00052117	5.6237	0.0025715	4.4839	0.0020503	457.2648417811629	95.068	1.4488	95.299	94.818	96.267	0.23103	-0.01864	0.0011671	NaN	44.531	74	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	751590			1307	11549	914	915							0.05051917030777986
ALLLLCPGGG	10	Unmodified	_ALLLLCPGGG_					0	0	0		ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	457.262413	912.510274	0.71084	0.00032504	3.8171	0.0017454	4.528	0.0020705	457.2640205435371	95.129	1.8322	95.292	94.743	96.575	0.16308	-0.025238	-0.00048499	NaN	44.531	81	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	671400			1308	11549	914	915							0.05051917030777986
ALLLLCPGGG	10	Unmodified	_ALLLLCPGGG_					0	0	0		ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	457.262413	912.510274	-1.7542	-0.00080212	6.1441	0.0028095	4.39	0.0020074	457.26506744322273	95.117	1.6676	95.319	94.735	96.403	0.20242	0.0014338	0.0016431	NaN	44.531	78	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	587850			1309	11549	914	915							0.05051917030777986
ALLLLCPGGG	10	Unmodified	_ALLLLCPGGG_					0	0	0		ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	ENST00000426231.5_2_X:153641633-153647973:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	457.262413	912.510274	0.21447	9.8071E-05	4.0499	0.0018518	4.2643	0.0019499	457.26416988778584	94.958	1.2504	95.378	95.02	96.27	0.41964	0.06048	-0.00027216	NaN	44.531	67	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	629320			1310	11549	914	915							0.05051917030777986
ALLLLLISESM	11	Unmodified	_ALLLLLISESM_					0	0	0		ENST00000484061.5_1_2:47221411-47251446:+|nuORF;ENST00000491786.5_1_2:47205894-47301059:+|nuORF;ENST00000409825.5_1_2:47184044-47301059:+|nuORF;ENSG00000165914|ENST00000328459|TTC7B;ENSG00000068724|ENST00000319190|TTC7A;nc|ENSG00000165914|Q86TV6-2|TTC7B;nc|ENSG00000068724|Q9ULT0-4|TTC7A	ENST00000484061.5_1_2:47221411-47251446:+|nuORF	ENST00000484061.5_1_2:47221411-47251446:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.8577880859375	2	601.856875	1201.6992	1.0107	0.00060827	0.38398	0.0002311	1.3946	0.00083938	601.8569689467788	103.23	2.1882	103.41	103.08	105.27	0.18297					123	54	4	0	0	0	0.7342	1	10904	10904		25.574	2.0514	1	2928900			1311	1205	915	916	1569	1569					0.10641524813581782
ALLLLLLGLL	10	Unmodified	_ALLLLLLGLL_					0	0	0			REV__ENSG00000134757|ENST00000257189|DSG3	REV__ENSG00000134757|ENST00000257189|DSG3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3609619140625	2	526.378103	1050.74165	-0.0060515	-3.1854E-06	2.2259	0.0011717	2.2199	0.0011685	526.3772798175805	33.333	0.31964	33.331	33.262	33.581	-0.0016365					9	6	2	0	0	0	0.37624	1	1957	1957		7.6903	0	1	20635	+		1312	19161	916	917	1570	1570					0.21831288004136695
ALLLLWRWPR	10	Unmodified	_ALLLLWRWPR_					0	0	0			REV__nc|ENSG00000140479|P29122-3|PCSK6	REV__nc|ENSG00000140479|P29122-3|PCSK6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9398193359375	3	441.939792	1322.79755	-0.63553	-0.00028087	0.70997	0.00031376	0.074437	3.2897E-05	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.86802	1	4647	4647		27.047	2.8155	1	409610	+		1313	19624	917	918	1571	1571					0.14905933964269025
ALLLMLMWVI	10	Unmodified	_ALLLMLMWVI_					0	0	0			REV__ENSG00000174944|ENST00000309170|P2RY14	REV__ENSG00000174944|ENST00000309170|P2RY14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.8568115234375	2	601.855624	1201.69669	-0.24099	-0.00014504	3.6887	0.0022201	3.4477	0.002075	601.8577844533773	103.4	2.3202	103.45	103.07	105.39	0.041481					122	55	4	0	0	0	0.85976	1	11319	11319		35.201	3.2459	1	1412200	+		1314	22028	918	919	1572	1572					0.10391397874946051
ALLLPDLDL	9	Unmodified	_ALLLPDLDL_					0	0	0			REV__nc|ENSG00000112294|P51649-2|ALDH5A1	REV__nc|ENSG00000112294|P51649-2|ALDH5A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7955627441406	2	491.794601	981.574648	0.29464	0.0001449	1.917	0.00094276	2.2116	0.0010877	491.7954245147593	45.248	1.2335	45.291	44.693	45.927	0.042599					75	30	3	0	0	0	0.69914	1	3308	3308		40.573	5.3719	1	440250	+		1315	29781	919	920	1573	1573					0.08312395388554705
ALLLVANIN	9	Unmodified	_ALLLVANIN_					0	0	0			REV__ENSG00000117834|ENST00000438567|SLC5A9	REV__ENSG00000117834|ENST00000438567|SLC5A9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7709655761719	2	470.794935	939.575317	-0.13142	-6.1873E-05	0.1429	6.7274E-05	0.011472	5.4011E-06	470.79478064573937	51.679	0.37152	52.347	52.105	52.477	0.6673					13	8	2	0	0	0	0.20789	1	5181	5181		31.955	0	1	239290	+		1316	18283	920	921	1574	1574					0.10311234828282068
ALLLVPVN	8	Unmodified	_ALLLVPVN_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10;ENST00000443426.2_1_6:43395621-43402667:+|nuORF	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7740783691406	2	419.773471	837.53239	-1.7976	-0.00075458	3.9115	0.0016419	2.1139	0.00088736	419.77504327395843	41.402	2.6775	41.816	41.329	44.007	0.4139					184	68	5	0	0	0	0.86791	1	3561	3561		28.254	0	1	169320000			1317	3344	921	922	1575	1575					0.10712464770847419
ALLLYQYLIR	10	Unmodified	_ALLLYQYLIR_					0	0	0			REV__ENSG00000100532|ENST00000216420|CGRRF1	REV__ENSG00000100532|ENST00000216420|CGRRF1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5928649902344	3	422.592058	1264.75434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.253	1	53.25	52.75	53.75	-0.0033035								0	0	0	0.45132	1	4646	4646		28.081	8.0847	1		+		1318	17201	922	923	1576	1576					0.13255699396358978
ALLLYQYLIR	10	Unmodified	_ALLLYQYLIR_					0	0	0			REV__ENSG00000100532|ENST00000216420|CGRRF1	REV__ENSG00000100532|ENST00000216420|CGRRF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5926818847656	3	422.592058	1264.75434	-0.68255	-0.00028844	2.8706	0.0012131	2.188	0.00092464	422.59313934575044	54.378	2.61	54.329	53.535	56.145	-0.049271					161	81	4	0	0	0	0.85633	2	4509	4509;4537		23.523	1.8369	1	1116400	+		1319	17201	922	923	1577;1578	1577					0.13255699396358978
ALLMPRVGGI	10	Unmodified	_ALLMPRVGGI_					0	0	0		nc|ENSG00000255408|Q9Y5H8-2|PCDHA3;ENSG00000255408|ENST00000522353|PCDHA3	nc|ENSG00000255408|Q9Y5H8-2|PCDHA3	nc|ENSG00000255408|Q9Y5H8-2|PCDHA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8087158203125	2	513.810062	1025.60557	-0.47161	-0.00024232	-1.6761	-0.00086122	-2.1478	-0.0011035	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.86452	1	4064	4064		30.504	1.3541	1	1552900			1320	8886	923	924	1579	1579					0.09379270221825209
ALLNALMK	8	Unmodified	_ALLNALMK_					0	0	0			REV__ENSG00000165204|ENST00000277309|OR1K1	REV__ENSG00000165204|ENST00000277309|OR1K1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2653503417969	2	437.264956	872.515359	-0.36505	-0.00015962	2.0195	0.00088307	1.6545	0.00072345	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.80706	1	928	928		19.36	0	1	1300600	+		1321	21162	924	925	1580	1580					0.0740022089340755
ALLPDLEILP	10	Unmodified	_ALLPDLEILP_					0	0	0		nc|ENSG00000103222|P33527-7|ABCC1;nc|ENSG00000103222|P33527-4|ABCC1;nc|ENSG00000103222|P33527-3|ABCC1;ENSG00000103222|ENST00000399410|ABCC1;nc|ENSG00000103222|P33527-9|ABCC1	nc|ENSG00000103222|P33527-7|ABCC1	nc|ENSG00000103222|P33527-7|ABCC1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3317260742188	2	547.328808	1092.64306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.36	1	119.23	118.73	119.73	-0.12704								0	0	0	0.45132	1	14148	14148		16.473	4.2663	1				1322	2065	925	926	1581	1581					0.10044639968418778
ALLPEAQLVRR	11	Unmodified	_ALLPEAQLVRR_					0	0	0			REV__ENST00000602783.1_1_19:49653221-49653392:+|nuORF	REV__ENST00000602783.1_1_19:49653221-49653392:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5927734375	3	422.594461	1264.76155	-0.12961	-5.4774E-05	-3.0685	-0.0012967	-3.1981	-0.0013515	422.59301325163335	54.438	1.5298	54.43	53.553	55.082	-0.0077057					142	48	4	0	0	0	0.76251	1	4839	4839		19.263	0	1	1173800	+		1323	29337	926	927	1582	1582					0.13976431996775318
ALLPIQLPTPT	11	Unmodified	_ALLPIQLPTPT_					0	0	0			REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3536376953125	2	582.355357	1162.69616	0.15829	9.2184E-05	-3.0082	-0.0017518	-2.8499	-0.0016597	582.3534714256248	107.11	1.1934	107.15	106.63	107.82	0.035622					78	27	4	0	0	0	0.6921	1	11781	11781		32.812	0	1	791140	+		1324	25968	927	928	1583	1583					0.1213201775105972
ALLPIQLPTPT	11	Unmodified	_ALLPIQLPTPT_					0	0	0			REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3534545898438	2	582.355357	1162.69616	-1.3468	-0.00078429	-1.8918	-0.0011017	-3.2386	-0.001886	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.71452	1	11339	11339		29.15	1.2673	1	120000000	+		1325	25968	927	928	1584	1584					0.1213201775105972
ALLPIQLPTPT	11	Unmodified	_ALLPIQLPTPT_					0	0	0			REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3527221679688	2	582.355357	1162.69616	0.75692	0.00044079	-3.4476	-0.0020077	-2.6906	-0.0015669	582.3532376593708	103.08	2.584	103.3	103	105.58	0.22556					189	68	3	0	0	0	0.6921	1	12691	12691		32.812	12.816	1	7736200	+		1326	25968	927	928	1585	1585					0.1213201775105972
ALLPIQLPTPT	11	Unmodified	_ALLPIQLPTPT_					0	0	0			REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	582.355357	1162.69616	0.94865	0.00055245	-3.844	-0.0022386	-2.8953	-0.0016861	582.3532129015966	107.39	0.52921	107.5	107.09	107.62	0.10396	0.28951	-0.00032207	NaN	32.812	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123380	+		1327	25968	927	928							0.1213201775105972
ALLPIQLPTPT	11	Unmodified	_ALLPIQLPTPT_					0	0	0			REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	582.355357	1162.69616	4.0634	0.0023663	-6.5337	-0.0038049	-2.4703	-0.0014386	582.3515960813871	107.08	0.90086	107.23	106.83	107.73	0.14929	0.019696	-0.0034548	NaN	32.812	50	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149640	+		1328	25968	927	928							0.1213201775105972
ALLPPGGLV	9	Unmodified	_ALLPPGGLV_					0	0	0			REV__ENST00000339728.5_1_2:235404101-235404395:-|nuORF	REV__ENST00000339728.5_1_2:235404101-235404395:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.7642822265625	2	418.765646	835.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.109	1	33.321	32.821	33.821	0.21168								0	0	0	0.32542	1	2380	2380		21.702	0	1		+		1329	25237	928	929	1586	1586					0.09240178253799058
ALLPPSALT	9	Unmodified	_ALLPPSALT_					0	0	0		ENST00000497377.5_1_6:31322262-31322491:-|nuORF	ENST00000497377.5_1_6:31322262-31322491:-|nuORF	ENST00000497377.5_1_6:31322262-31322491:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7679138183594	2	441.768386	881.522219	1.5192	0.00067115	-2.2878	-0.0010107	-0.76859	-0.00033954	441.7673408334102	107.1	1.0458	107.2	106.82	107.87	0.10395					97	38	4	0	0	0	0.76996	1	13060	13060		33.516	1.5607	1	2679600			1330	12802	929	930	1587	1587					0.07671857045602337
ALLPRHLY	8	Unmodified	_ALLPRHLY_					0	0	0			REV__nc|ENSG00000089505|Q8IZ96-12|CMTM1	REV__nc|ENSG00000089505|Q8IZ96-12|CMTM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7962951660156	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.86791	1	4136	4136		28.254	1.4582	1	581270	+		1331	29721	930	931	1588	1588					0.08446074267988024
ALLPVPQVRYL	11	Unmodified	_ALLPVPQVRYL_					0	0	0		ENST00000592703.1_1_19:16344886-16345243:+|nuORF	ENST00000592703.1_1_19:16344886-16345243:+|nuORF	ENST00000592703.1_1_19:16344886-16345243:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5978088378906	3	423.595691	1267.76524	2.8995	0.0012282	1.7133	0.00072574	4.6128	0.0019539	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.75041	1	11672	11672		19.263	5.1767	1	6928400			1332	14293	931	932	1589	1589					0.14207101770671215
ALLPWWGKVRK	11	Unmodified	_ALLPWWGKVRK_					0	0	0			REV__nc|ENSG00000115155|Q9HC10-5|OTOF	REV__nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9433288574219	3	451.943313	1352.80811	-1.6541	-0.00074756	1.7865	0.00080741	0.13242	5.9847E-05	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.76579	1	4741	4741		18.531	0.69791	1	430100	+		1333	18089	932	933	1590	1590					0.1458191661872661
ALLPWWGKVRK	11	Unmodified	_ALLPWWGKVRK_					0	0	0			REV__nc|ENSG00000115155|Q9HC10-5|OTOF	REV__nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9431457519531	3	451.943313	1352.80811	-1.2962	-0.0005858	0.89181	0.00040305	-0.40436	-0.00018275	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.76251	1	4307	4307		19.263	3.342	1	734340	+		1334	18089	932	933	1591	1591					0.1458191661872661
ALLPWWGKVRK	11	Unmodified	_ALLPWWGKVRK_					0	0	0			REV__nc|ENSG00000115155|Q9HC10-5|OTOF	REV__nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.94329833984375	3	451.943313	1352.80811	0.3266	0.00014761	-0.75952	-0.00034326	-0.43292	-0.00019565	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.78391	1	4388	4388		14.694	0.60766	1	721610	+		1335	18089	932	933	1592	1592					0.1458191661872661
ALLPWWGKVRK	11	Unmodified	_ALLPWWGKVRK_					0	0	0			REV__nc|ENSG00000115155|Q9HC10-5|OTOF	REV__nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.943359375	3	451.943313	1352.80811	-0.56282	-0.00025436	0.17242	7.7922E-05	-0.39041	-0.00017644	451.9432961289507	50.995	2.7237	51.43	49.805	52.529	0.43505					150	65	3	0	0	0	0.76579	1	5041	5041		18.531	0	1	757900	+		1336	18089	932	933	1593	1593					0.1458191661872661
ALLQALELLLI	11	Unmodified	_ALLQALELLLI_					0	0	0		nc|ENSG00000162877|Q6GTS8-2|PM20D1;ENST00000460624.5_1_1:205801865-205819200:-|nuORF;ENSG00000162877|ENST00000367136|PM20D1	nc|ENSG00000162877|Q6GTS8-2|PM20D1	nc|ENSG00000162877|Q6GTS8-2|PM20D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.929443359375	3	403.93208	1208.77441	-1.8895	-0.00076324	-4.4403	-0.0017936	-6.3298	-0.0025568	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.76892	1	3503	3503		17.833	3.1395	1	2300300			1337	5743	933	934	1594	1594					0.1783745033633295
ALLQCHQV	8	Unmodified	_ALLQCHQV_					0	0	0		ENSG00000187609|ENST00000340951|EXD3;ENST00000478344.6_1_9:140240296-140248823:-|nuORF;nc|ENSG00000187609|Q8N9H8-3|EXD3;ENST00000491734.6_1_9:140201404-140249090:-|nuORF;nc|ENSG00000187609|Q8N9H8-2|EXD3;ENST00000487745.5_1_9:140201404-140247406:-|nuORF	ENSG00000187609|ENST00000340951|EXD3	ENSG00000187609|ENST00000340951|EXD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6085510253906	2	456.242012	910.469472	-0.74068	-0.00033793	-2.8595	-0.0013046	-3.6001	-0.0016425	456.2404808141392	65.258	0.95435	65.644	64.863	65.817	0.38615					38	23	2	0	0	0	0.4196	1	7014	7014		18.324	6.8134	1	300210			1338	7865	934	935	1595	1595					0.01065575711152178
ALLQKFDLQQ	10	Unmodified	_ALLQKFDLQQ_					0	0	0			REV__ENSG00000163214|ENST00000457308|DHX57	REV__ENSG00000163214|ENST00000457308|DHX57	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.2452697753906	3	401.895917	1202.66592	-0.16859	-6.7755E-05	-1.5053	-0.00060496	-1.6738	-0.00067271	401.89524105344515	21.15	0.50852	20.521	20.254	20.762	-0.62834					29	13	3	0	0	0	0.37624	1	749	749		58.23	6.0628	1	114790	+		1339	20890	935	936	1596	1596					0.07269659085886815
ALLQLRRG	8	Unmodified	_ALLQLRRG_					0	0	0		ENSG00000215912|ENST00000401095|TTC34;nc|ENSG00000215912|A8MYJ7|TTC34	ENSG00000215912|ENST00000401095|TTC34	ENSG00000215912|ENST00000401095|TTC34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8002014160156	2	463.798343	925.582134	0.28206	0.00013082	4.2188	0.0019567	4.5009	0.0020875	463.8001612881591	41.523	1.5134	41.492	41.236	42.75	-0.030991					87	37	3	0	0	0	0.7961	1	3080	3080		17.365	0	1	527400			1340	8657	936	937	1597	1597					0.1163659249950797
ALLRSPLPRV	10	Unmodified	_ALLRSPLPRV_					0	0	0			REV__ENST00000409200.7_1_12:56231120-56232389:-|nuORF	REV__ENST00000409200.7_1_12:56231120-56232389:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.3619384765625	2	561.361308	1120.70806	0.36083	0.00020256	3.644	0.0020456	4.0049	0.0022482	561.3631992343464	46.11	1.1029	46.106	45.577	46.68	-0.0041618					45	26	2	0	0	0	0.86444	1	3690	3690		14.865	1.0895	1	163920	+		1341	26340	937	938	1598	1598					0.15253679284933241
ALLSLSPLP	9	Unmodified	_ALLSLSPLP_					0	0	0			REV__ENST00000584871.5_1_17:80015993-80017016:-|nuORF	REV__ENST00000584871.5_1_17:80015993-80017016:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	455.7843933105469	2	455.784036	909.553519	-1.8164	-0.00082788	3.166	0.001443	1.3496	0.00061515	455.785318563311	43.535	2.2148	43.535	42.918	45.133	0					85	53	2	0	0	0	0.7932	1	3123	3123		24.203	1.1603	1	247130	+		1342	29086	938	939	1599	1599					0.09512430079701062
ALLSPVLLT	9	Unmodified	_ALLSPVLLT_					0	0	0		ENST00000268719.8_1_17:17968924-17969182:+|nuORF	ENST00000268719.8_1_17:17968924-17969182:+|nuORF	ENST00000268719.8_1_17:17968924-17969182:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8005676269531	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3201	3201		23.042	4.7181	1	942760			1343	9542	939	940	1600	1600					0.11905003113804469
ALLSVWVL	8	Unmodified	_ALLSVWVL_					0	0	0		ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.7819519042969	2	450.781296	899.54804	2.0752	0.00093547	-1.847	-0.00083258	0.22826	0.00010289	450.7803121682169	100.02	0.91292	100.37	99.985	100.9	0.3459					49	22	3	0	0	0	0.52826	1	12142	12142		74.517	3.2209	1	893820			1344	6566	940	941	1601	1601					0.09424751287883737
ALLTALPSFV	10	Unmodified	_ALLTALPSFV_					0	0	0			REV__ENSG00000182170|ENST00000332314|MRGPRG	REV__ENSG00000182170|ENST00000332314|MRGPRG	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3132934570312	2	516.310418	1030.60628	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.48	1	114.49	113.99	114.99	0.0094528								0	0	0	0.45132	1	13815	13815		24.203	0.68005	1		+		1345	22505	941	942	1602	1602					0.09220388142512093
ALLTLSYC	8	Unmodified	_ALLTLSYC_					0	0	0			REV__ENST00000323927.2_1_9:140082284-140082365:-|nuORF	REV__ENST00000323927.2_1_9:140082284-140082365:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2312927246094	2	442.233322	882.45209	-0.42296	-0.00018705	-3.5766	-0.0015817	-3.9995	-0.0017687	442.23162529974314	45.532	0.67482	46.427	46.169	46.843	0.89542					39	16	4	0	0	0	0.86791	1	4259	4259		28.254	1.4582	1	1245100	+		1346	25038	942	943	1603	1603					0.006162353854961111
ALLTLSYC	8	Unmodified	_ALLTLSYC_					0	0	0			REV__ENST00000323927.2_1_9:140082284-140082365:-|nuORF	REV__ENST00000323927.2_1_9:140082284-140082365:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	442.233322	882.45209	-1.131	-0.00050016	-2.8462	-0.0012587	-3.9772	-0.0017588	442.2319485871131	45.768	0.64709	46.239	45.928	46.575	0.47139	-0.094154	0.00034894	NaN	28.254	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1321300	+		1347	25038	942	943							0.006162353854961111
ALLTLSYC	8	Unmodified	_ALLTLSYC_					0	0	0			REV__ENST00000323927.2_1_9:140082284-140082365:-|nuORF	REV__ENST00000323927.2_1_9:140082284-140082365:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	442.233322	882.45209	-0.42296	-0.00018705	-3.5766	-0.0015817	-3.9995	-0.0017687	442.23162529974314	45.532	0.67482	46.427	46.169	46.843	0.89542	0.094154	-0.00029704	NaN	28.254	39	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1245100	+		1348	25038	942	943							0.006162353854961111
ALLTVPKP	8	Unmodified	_ALLTVPKP_					0	0	0			REV__nc|ENSG00000072756|Q96Q11-2|TRNT1	REV__nc|ENSG00000072756|Q96Q11-2|TRNT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.77484130859375	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.87922	1	3303	3303		31.955	0	1	10965000	+		1349	16654	943	944	1604	1604					0.10712464770847419
ALLTVPKP	8	Unmodified	_ALLTVPKP_					0	0	0			REV__nc|ENSG00000072756|Q96Q11-2|TRNT1	REV__nc|ENSG00000072756|Q96Q11-2|TRNT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7749328613281	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.84341	1	3315	3315		24.203	0	1	10266000	+		1350	16654	943	944	1605	1605					0.10712464770847419
ALLTVPKP	8	Unmodified	_ALLTVPKP_					0	0	0			REV__nc|ENSG00000072756|Q96Q11-2|TRNT1	REV__nc|ENSG00000072756|Q96Q11-2|TRNT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7749328613281	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.82658	1	3668	3668		21.96	0	1	184570000	+		1351	16654	943	944	1606	1606					0.10712464770847419
ALLVGSIIP	9	Unmodified	_ALLVGSIIP_					0	0	0			REV__ENSG00000127526|ENST00000595753|SLC35E1	REV__ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7882385253906	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.7932	1	3180	3180		18.324	4.5491	1	448230	+		1352	18737	944	945	1607	1607					0.11308733942325944
ALLVIEKSF	9	Unmodified	_ALLVIEKSF_					0	0	0			REV__chr3:177765833-177766683|31|11.74|0.0|20.16|+|1|LINC00578,LINC00578|1	REV__chr3:177765833-177766683|31|11.74|0.0|20.16|+|1|LINC00578,LINC00578|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.3106689453125	2	510.310418	1018.60628	-1.2754	-0.00065085	1.5317	0.00078164	0.25629	0.00013079	510.3110295003225	79.313	0.80144	79.412	79.114	79.915	0.098694					56	25	3	0	0	0	0.25483	1	7493	7493		68.787	10.005	1	419210	+		1353	15803	945	946	1608	1608					0.09772388142528143
ALLVIRKG	8	Unmodified	_ALLVIRKG_					0	0	0			REV__nc|ENSG00000158467|Q96HN2-4|AHCYL2	REV__nc|ENSG00000158467|Q96HN2-4|AHCYL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3004150390625	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.81548	1	8345	8345		20.482	5.8177	1	5485100	+		1354	20608	946	947	1609	1609					0.14627262273370434
ALLVIVTPG	9	Unmodified	_ALLVIVTPG_					0	0	0		ENSG00000204922|ENST00000377953|UQCC3	ENSG00000204922|ENST00000377953|UQCC3	ENSG00000204922|ENST00000377953|UQCC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7876281738281	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.76402	1	3037	3037		35.201	0	1	12471000			1355	8497	947	948	1610	1610					0.11308733942337312
ALLVIVTPG	9	Unmodified	_ALLVIVTPG_					0	0	0		ENSG00000204922|ENST00000377953|UQCC3	ENSG00000204922|ENST00000377953|UQCC3	ENSG00000204922|ENST00000377953|UQCC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7875061035156	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.7932	1	3564	3564		13.775	0.81615	1	539980			1356	8497	947	948	1611	1611					0.11308733942337312
ALLVIVTPG	9	Unmodified	_ALLVIVTPG_					0	0	0		ENSG00000204922|ENST00000377953|UQCC3	ENSG00000204922|ENST00000377953|UQCC3	ENSG00000204922|ENST00000377953|UQCC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78790283203125	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.7932	1	3218	3218		25.45	1.2474	1	403970			1357	8497	947	948	1612	1612					0.11308733942337312
ALLVLGAPP	9	Unmodified	_ALLVLGAPP_					0	0	0		ENST00000299954.13_1_17:65373938-65374277:+|nuORF	ENST00000299954.13_1_17:65373938-65374277:+|nuORF	ENST00000299954.13_1_17:65373938-65374277:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.7749938964844	2	425.773471	849.53239	-0.11951	-5.0886E-05	3.5324	0.001504	3.4129	0.0014531	425.7748940405711	39.012	1.3083	38.959	38.379	39.687	-0.052731					144	37	5	0	0	0	0.7932	1	2421	2421		21.702	6.0661	1	13488000			1358	9786	948	949	1613	1613					0.10160464770854105
ALLVLPLTS	9	Unmodified	_ALLVLPLTS_					0	0	0		nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9;ENSG00000086848|ENST00000616540|ALG9	nc|ENSG00000086848|Q9H6U8-2|ALG9	nc|ENSG00000086848|Q9H6U8-2|ALG9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8011779785156	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.78058	1	3326	3326		30.504	5.0535	1	279560			1359	1562	949	950	1614	1614					0.11905003113804469
ALLVPEKL	8	Unmodified	_ALLVPEKL_					0	0	0		nc|ENSG00000164308|Q6P179-3|ERAP2;ENSG00000164308|ENST00000437043|ERAP2;nc|ENSG00000164308|Q6P179-4|ERAP2;nc|ENSG00000164308|Q6P179-2|ERAP2	nc|ENSG00000164308|Q6P179-3|ERAP2	nc|ENSG00000164308|Q6P179-3|ERAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7879638671875	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.80706	1	3176	3176		19.36	1.0356	1	54520000			1360	5952	950	951	1615	1615					0.11308733942325944
ALLVPTLIS	9	Unmodified	_ALLVPTLIS_					0	0	0		ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B	ENSG00000008869|ENST00000233099|HEATR5B	ENSG00000008869|ENST00000233099|HEATR5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.799560546875	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3329	3329		12.959	1.4482	1	1516700			1361	751	951	952	1616	1616					0.11905003113804469
ALLVRVCV	8	Unmodified	_ALLVRVCV_					0	0	0		ENST00000515320.5_1_5:118788206-118809606:+|nuORF	ENST00000515320.5_1_5:118788206-118809606:+|nuORF	ENST00000515320.5_1_5:118788206-118809606:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.77484130859375	2	436.772948	871.531344	1.4332	0.00062597	2.8008	0.0012233	4.234	0.0018493	436.7740845812963	90.925	2.5794	90.858	90.135	92.715	-0.067085					212	61	5	0	0	0	0.87276	6	9515	9515;9526;9538;9550;9574;9587		29.842	1.5873	1	18772000			1362	13080	952	953	1617;1618;1619;1620;1621;1622	1617					0.0904392713028983
ALLVRVCV	8	Unmodified	_ALLVRVCV_					0	0	0		ENST00000515320.5_1_5:118788206-118809606:+|nuORF	ENST00000515320.5_1_5:118788206-118809606:+|nuORF	ENST00000515320.5_1_5:118788206-118809606:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7748107910156	2	436.772948	871.531344	2.1516	0.00093975	2.1059	0.00091981	4.2575	0.0018596	436.7737664406362	90.685	2.706	90.731	90.049	92.755	0.046448					226	64	5	0	0	0	0.87276	7	9373	9373;9383;9395;9407;9419;9431;9443		37.028	8.7742	1	18180000			1363	13080	952	953	1623;1624;1625;1626;1627;1628;1629	1623					0.0904392713028983
ALLVRVCV	8	Unmodified	_ALLVRVCV_					0	0	0		ENST00000515320.5_1_5:118788206-118809606:+|nuORF	ENST00000515320.5_1_5:118788206-118809606:+|nuORF	ENST00000515320.5_1_5:118788206-118809606:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.77471923828125	2	436.772948	871.531344	0.64809	0.00028307	3.6793	0.001607	4.3274	0.0018901	436.77446931538566	90.701	2.4445	90.855	90.26	92.704	0.15388					187	58	4	0	0	0	0.87276	2	9098	9098;9158		29.842	1.5873	1	11761000			1364	13080	952	953	1630;1631	1630					0.0904392713028983
ALLVRVCV	8	Unmodified	_ALLVRVCV_					0	0	0		ENST00000515320.5_1_5:118788206-118809606:+|nuORF	ENST00000515320.5_1_5:118788206-118809606:+|nuORF	ENST00000515320.5_1_5:118788206-118809606:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.77490234375	2	436.772948	871.531344	0.9016	0.00039379	3.4833	0.0015214	4.3849	0.0019152	436.7743718767523	90.506	2.2468	90.957	90.49	92.737	0.45058					142	53	4	0	0	0	0.87276	1	10705	10705		29.842	1.5873	1	8766100			1365	13080	952	953	1632	1632					0.0904392713028983
ALLVWRGPA	9	Unmodified	_ALLVWRGPA_					0	0	0		ENSG00000183454|ENST00000330684|GRIN2A;nc|ENSG00000183454|Q12879-2|GRIN2A;ENST00000566665.1_1_16:10273773-10274277:-|nuORF	ENSG00000183454|ENST00000330684|GRIN2A	ENSG00000183454|ENST00000330684|GRIN2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7958984375	2	491.795269	981.575986	-0.62954	-0.00030961	1.7556	0.00086339	1.126	0.00055378	491.79606037186466	51.204	1.5616	51.18	50.34	51.902	-0.02343					100	43	3	0	0	0	0.76996	1	4551	4551		33.516	1.5607	1	394140			1366	7533	953	954	1633	1633					0.08446074267988024
ALLVWRGPA	9	Unmodified	_ALLVWRGPA_					0	0	0		ENSG00000183454|ENST00000330684|GRIN2A;nc|ENSG00000183454|Q12879-2|GRIN2A;ENST00000566665.1_1_16:10273773-10274277:-|nuORF	ENSG00000183454|ENST00000330684|GRIN2A	ENSG00000183454|ENST00000330684|GRIN2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.29705810546875	2	491.795269	981.575986	-0.68146	-0.00033514	1.4858	0.00073072	0.80436	0.00039558	491.79593734879836	67.092	0.42995	67.225	67.062	67.492	0.13326					25	17	2	0	0	0	0.7932	1	5980	5980		25.45	4.9683	1	65278			1367	7533	953	954	1634	1634					0.08446074267988024
ALLYFFMRKNF	11	Unmodified	_ALLYFFMRKNF_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.9293518066406	3	483.928564	1448.76386	0.11537	5.583E-05	1.965	0.00095091	2.0803	0.0010067	483.92948716936945	26.29	0.71645	26.395	26.013	26.73	0.1054					81	32	3	0	0	0	0.73621	1	994	994		25.126	0.89417	1	319080			1368	4062	954	955	1635	1635					0.057431444102348905
ALLYFFMRKNF	11	Unmodified	_ALLYFFMRKNF_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.9305114746094	3	483.928564	1448.76386	0.52608	0.00025459	1.5394	0.00074498	2.0655	0.00099957	483.92928533828615	26.367	0.78899	26.396	26.029	26.818	0.028172					85	35	3	0	0	0	0.76251	1	1003	1003		19.263	0.73163	1	331160			1369	4062	954	955	1636	1636					0.057431444102348905
ALLYFFMRKNF	11	Unmodified	_ALLYFFMRKNF_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.9297790527344	3	483.928564	1448.76386	-0.098239	-4.7541E-05	2.2074	0.0010682	2.1092	0.0010207	483.9295237103021	27.053	0.88755	26.878	26.523	27.41	-0.17559					51	19	4	0	0	0	0.6493	1	1523	1523		38.754	16.192	1	929160			1370	4062	954	955	1637	1637					0.057431444102348905
ALLYFFMRKNF	11	Unmodified	_ALLYFFMRKNF_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.9296875	3	483.928564	1448.76386	1.3901	0.00067269	0.56586	0.00027383	1.9559	0.00094653	483.9288208181716	27.066	1.0024	26.726	26.323	27.325	-0.34035					60	22	4	0	0	0	0.73621	1	1525	1525		25.126	6.5949	1	894520			1371	4062	954	955	1638	1638					0.057431444102348905
ALLYFFMRKNF	11	Unmodified	_ALLYFFMRKNF_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	483.928564	1448.76386	-1.1342	-0.00054887	3.2222	0.0015593	2.088	0.0010105	483.93004544508364	26.94	1.2073	26.912	26.557	27.764	-0.027706	0.10403	0.0011212	NaN	38.754	65	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138540			1372	4062	954	955							0.057431444102348905
ALLYFFMRKNF	11	Unmodified	_ALLYFFMRKNF_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	483.928564	1448.76386	-0.87151	-0.00042175	2.9453	0.0014253	2.0738	0.0010036	483.92996305305127	26.737	0.71714	26.803	26.419	27.136	0.066875	-0.0044198	0.00071926	NaN	38.754	82	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	283730			1373	4062	954	955							0.057431444102348905
ALLYFFMRKNF	11	Unmodified	_ALLYFFMRKNF_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	483.928564	1448.76386	0.11907	5.762E-05	3.646	0.0017644	3.7651	0.001822	484.26408669797667	26.734	0.13731	26.843	26.733	26.871	0.10901	0.034835	0.0017365	NaN	38.754	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54361			1374	4062	954	955							0.057431444102348905
ALMCPSQLV	9	Unmodified	_ALMCPSQLV_					0	0	0		ENST00000495183.5_1_6:29910749-29913287:+|nuORF;chr6:29945281-30492749|18|12.83|0.15|6.42|+|0|HLA-A,HLA-E|1	ENST00000495183.5_1_6:29910749-29913287:+|nuORF	ENST00000495183.5_1_6:29910749-29913287:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.245849609375	2	481.245906	960.477259	-1.9639	-0.00094514	1.4205	0.00068359	-0.54348	-0.00026155	481.2464659109781	24.432	0.7729	24.432	24.034	24.807	0					53	33	3	0	0	0	0.76255	1	836	836		35.618	4.0885	1	66817			1375	12762	955	956	1639	1639					-0.004560330835715831
ALMGRMPPFL	10	Unmodified	_ALMGRMPPFL_					0	0	0		ENST00000574957.1_1_16:3075861-3075963:+|nuORF	ENST00000574957.1_1_16:3075861-3075963:+|nuORF	ENST00000574957.1_1_16:3075861-3075963:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.8051147460938	2	566.803922	1131.59329	-0.52899	-0.00029983	3.1302	0.0017742	2.6012	0.0014744	566.8055131198089	62.726	2.3736	63.113	62.36	64.733	0.38779					117	54	3	0	0	0	0.37951	3	6754	6742;6754;6808		65.803	16.362	1	633890			1376	14041	956	957	1640;1641;1642	1641					0.03275910487127476
ALMGRMPPFL	10	Unmodified	_ALMGRMPPFL_					0	0	0		ENST00000574957.1_1_16:3075861-3075963:+|nuORF	ENST00000574957.1_1_16:3075861-3075963:+|nuORF	ENST00000574957.1_1_16:3075861-3075963:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.8052368164062	2	566.803922	1131.59329	0.86268	0.00048897	1.8327	0.0010388	2.6954	0.0015277	566.804831631569	62.733	2.0024	63.288	62.559	64.561	0.55449					102	46	4	0	0	0	0.47599	2	6714	6714;6749		57.811	8.3697	1	716580			1377	14041	956	957	1643;1644	1643					0.03275910487127476
ALMHFCQI	8	Unmodified	_ALMHFCQI_					0	0	0		ENST00000582077.5_1_18:66382817-66385349:+|nuORF	ENST00000582077.5_1_18:66382817-66385349:+|nuORF	ENST00000582077.5_1_18:66382817-66385349:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.8109130859375	2	481.732966	961.451379	-0.5682	-0.00027372	-3.0638	-0.0014759	-3.632	-0.0017497	481.7308896923529	29.917	0.57113	29.945	29.791	30.362	0.028618					16	12	2	0	0	0	0.4196	1	1971	1971		28.254	3.7503	1	70827			1378	14109	957	958	1645	1645					-0.030888825352008098
ALMHFCQI	8	Unmodified	_ALMHFCQI_					0	0	0		ENST00000582077.5_1_18:66382817-66385349:+|nuORF	ENST00000582077.5_1_18:66382817-66385349:+|nuORF	ENST00000582077.5_1_18:66382817-66385349:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.8109130859375	2	481.732966	961.451379	-0.65575	-0.0003159	0.82487	0.00039737	0.16911	8.1468E-05	481.7325873081224	30.464	0.26472	30.493	30.274	30.538	0.028618					6	5	2	0	0	0	0.4196	1	1971	1971		28.254	3.7503	1	13075			1379	14109	957	958	1646	1646					-0.030888825352008098
ALMHLPSA	8	Unmodified	_ALMHLPSA_					0	0	0			REV__ENST00000571989.1_1_17:80551586-80559372:+|nuORF	REV__ENST00000571989.1_1_17:80551586-80559372:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2272644042969	2	420.225831	838.437109	2.3003	0.00096666	2.5371	0.0010662	4.8374	0.0020328	420.2267541958877	76.314	2.1809	76.362	74.634	76.815	0.047974					151	68	3	0	0	0	0.86791	1	7365	7365		28.254	0.37203	1	250270	+		1380	19698	958	959	1647	1647					0.01142788308152376
ALMLINIPK	9	Unmodified	_ALMLINIPK_					0	0	0		ENST00000224756.12_1_10:86230212-86274020:+|nuORF	ENST00000224756.12_1_10:86230212-86274020:+|nuORF	ENST00000224756.12_1_10:86230212-86274020:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.77130126953125	2	506.814813	1011.61507	0.45976	0.00023301	4.0799	0.0020677	4.5396	0.0023008	506.81619916623185	17.224	0.22606	16.742	16.625	16.851	-0.48256					6	4	2	0	0	0	0.20789	1	217	217		12.959	0	1	44904			1381	9183	959	960	1648	1648					0.10973038507336241
ALMLINIPK	9	Unmodified	_ALMLINIPK_					0	0	0		ENST00000224756.12_1_10:86230212-86274020:+|nuORF	ENST00000224756.12_1_10:86230212-86274020:+|nuORF	ENST00000224756.12_1_10:86230212-86274020:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	506.814813	1011.61507	1.1151	0.00056515	2.1448	0.001087	3.2598	0.0016521	506.81571784812905	17.261	0.27758	16.65	16.52	16.798	-0.6107	-0.045838	-0.00081301	NaN	24.203	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46952			1382	9183	959	960							0.10973038507336241
ALMVPLLSAS	10	Unmodified	_ALMVPLLSAS_					0	0	0		ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.290283203125	2	501.288628	1000.5627	-0.064942	-3.2555E-05	3.6163	0.0018128	3.5513	0.0017802	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.81018	2	8529	8445;8529		38.806	2.6214	1	2854100			1383	10983	960	961	1649;1650	1650					0.06244455373746405
ALMVPLLSAS	10	Unmodified	_ALMVPLLSAS_					0	0	0		ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2903137207031	2	501.288628	1000.5627	0.83893	0.00042055	2.6202	0.0013135	3.4591	0.001734	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.86452	1	8596	8596		30.504	1.3541	1	2850500			1384	10983	960	961	1651	1651					0.06244455373746405
ALMVPLLSAS	10	Unmodified	_ALMVPLLSAS_					0	0	0		ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2902526855469	2	501.288628	1000.5627	1.1291	0.00056599	2.4986	0.0012525	3.6277	0.0018185	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.81018	4	8956	8956;8992;9040;9283		38.806	10.924	1	9883700			1385	10983	960	961	1652;1653;1654;1655	1652					0.06244455373746405
ALMVPLLSAS	10	Unmodified	_ALMVPLLSAS_					0	0	0		ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2901306152344	2	501.288628	1000.5627	-0.52378	-0.00026256	3.9973	0.0020038	3.4736	0.0017413	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.85934	1	8489	8489		35.618	4.0885	1	2929300			1386	10983	960	961	1656	1656					0.06244455373746405
ALMVPLLSAS	10	Unmodified	_ALMVPLLSAS_					0	0	0		ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.290283203125	2	501.288628	1000.5627	-0.50775	-0.00025453	3.985	0.0019976	3.4772	0.0017431	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.81018	2	8237	8237;8309		38.806	3.1879	1	3014100			1387	10983	960	961	1657;1658	1657					0.06244455373746405
ALMVPLLSAS	10	Unmodified	_ALMVPLLSAS_					0	0	0		ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.29046630859375	2	501.288628	1000.5627	-0.50311	-0.0002522	4.0857	0.0020481	3.5826	0.0017959	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.71042	6	8596	8464;8500;8512;8524;8596;8893		44.117	3.1879	1	10459000			1388	10983	960	961	1659;1660;1661;1662;1663;1664	1663					0.06244455373746405
ALMVPLLSAS	10	Unmodified	_ALMVPLLSAS_					0	0	0		ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29034423828125	2	501.288628	1000.5627	0.65623	0.00032896	2.7707	0.0013889	3.4269	0.0017179	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.84112	1	8235	8235		37.159	2.9866	1	2931000			1389	10983	960	961	1665	1665					0.06244455373746405
ALMVPLLSAS	10	Unmodified	_ALMVPLLSAS_					0	0	0		ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29046630859375	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.84112	6	8617	8402;8474;8486;8605;8617;8641		37.159	2.4222	1	9566900			1390	10983	960	961	1666;1667;1668;1669;1670;1671	1670					0.06244455373746405
ALMVPLLSAS	10	Unmodified	_ALMVPLLSAS_					0	0	0		ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2902526855469	2	501.288628	1000.5627	-0.28392	-0.00014233	3.869	0.0019395	3.5851	0.0017972	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.84112	1	10075	10075		37.159	9.2769	1	9038000			1391	10983	960	961	1672	1672					0.06244455373746405
ALMVPLLSAS	10	Unmodified	_ALMVPLLSAS_					0	0	0		ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	ENST00000383729.8_2_3:49027379-49027721:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29046630859375	2	501.288628	1000.5627	-0.45424	-0.0002277	3.9764	0.0019933	3.5222	0.0017656	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.81018	3	10108	10108;10204;10360		38.806	8.3025	1	9727400			1392	10983	960	961	1673;1674;1675	1673					0.06244455373746405
ALNKHRSRRK	10	Unmodified	_ALNKHRSRRK_					0	0	0		ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.59307861328125	3	422.593566	1264.75887	-1.6666	-0.00070429	0.81967	0.00034639	-0.84691	-0.0003579	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.86409	2	4674	4565;4674		26.063	5.2262	1	771770			1393	1275	961	962	1676;1677	1677					0.13708021382490188
ALNKHRSRRK	10	Unmodified	_ALNKHRSRRK_					0	0	0		ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.593017578125	3	422.593566	1264.75887	1.8674	0.00078915	-2.9587	-0.0012503	-1.0913	-0.00046117	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.86225	2	4836	4836;4871		32.751	9.3726	1	997830			1394	1275	961	962	1678;1679	1678					0.13708021382490188
ALNKHRSRRK	10	Unmodified	_ALNKHRSRRK_					0	0	0		ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5926818847656	3	422.593566	1264.75887	0.31839	0.00013455	-1.7233	-0.00072828	-1.405	-0.00059372	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.85086	1	4481	4481		19.263	0	1	1249100			1395	1275	961	962	1680	1680					0.13708021382490188
ALNKHRSRRK	10	Unmodified	_ALNKHRSRRK_					0	0	0		ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.59246826171875	3	422.593566	1264.75887	-0.68255	-0.00028844	-0.69889	-0.00029535	-1.3814	-0.00058379	422.59313934575044	54.378	2.61	54.329	53.535	56.145	-0.049271					161	81	4	0	0	0	0.86621	2	4452	4452;4519		26.063	3.5018	1	1116400			1396	1275	961	962	1681;1682	1681					0.13708021382490188
ALNKRLEV	8	Unmodified	_ALNKRLEV_					0	0	0			REV__ENSG00000256525|ENST00000539111|POLG2	REV__ENSG00000256525|ENST00000539111|POLG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2370300292969	2	471.790184	941.565815	0.35514	0.00016755	-1.781	-0.00084024	-1.4258	-0.00067268	471.7894028635897	33.621	0.45656	33.926	33.702	34.159	0.30494					15	10	2	0	0	0	0.4196	1	2477	2477		12.207	0	1	109270	+		1397	23909	962	963	1683	1683					0.0926946654275298
ALNKRLEV	8	Unmodified	_ALNKRLEV_					0	0	0			REV__ENSG00000256525|ENST00000539111|POLG2	REV__ENSG00000256525|ENST00000539111|POLG2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	471.790184	941.565815	0.59242	0.0002795	-1.1708	-0.00055237	-0.57837	-0.00027287	471.7894578950775	33.613	0.5005	33.783	33.484	33.984	0.16971	-0.071253	0.00028873	NaN	7.1934	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92648	+		1398	23909	962	963							0.0926946654275298
ALNLFKHLA	9	Unmodified	_ALNLFKHLA_					0	0	0		ENSG00000197632|ENST00000299502|SERPINB2	ENSG00000197632|ENST00000299502|SERPINB2	ENSG00000197632|ENST00000299502|SERPINB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.80859375	2	513.808377	1025.6022	-0.18035	-9.2668E-05	1.1688	0.00060056	0.98848	0.00050789	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.7932	1	4265	4265		25.45	1.2474	1	1777300			1399	8185	963	964	1684	1684					0.09042343439477918
ALNRTHRPVF	10	Unmodified	_ALNRTHRPVF_					0	0	0			REV__ENSG00000150456|ENST00000382758|EEF1AKMT1	REV__ENSG00000150456|ENST00000382758|EEF1AKMT1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.840576171875	2	605.843813	1209.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.361	1	44.811	44.311	45.311	0.45025								0	0	0	0.45132	1	4065	4065		40.058	3.6114	1		+		1400	20210	964	965	1685	1685					0.0766243647697138
ALNRTHRPVF	10	Unmodified	_ALNRTHRPVF_					0	0	0			REV__ENSG00000150456|ENST00000382758|EEF1AKMT1	REV__ENSG00000150456|ENST00000382758|EEF1AKMT1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.8363647460938	2	605.843813	1209.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.617	1	44.39	43.89	44.89	0.7738								0	0	0	0.45132	1	3970	3970		31.53	16.665	1		+		1401	20210	964	965	1686	1686					0.0766243647697138
ALNTLHES	8	Unmodified	_ALNTLHES_					0	0	0		ENSG00000142599|ENST00000400908|RERE;ENST00000480342.5_1_1:8525723-8716473:-|nuORF	ENSG00000142599|ENST00000400908|RERE	ENSG00000142599|ENST00000400908|RERE	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.787841796875	2	442.727249	883.439946	-0.80468	-0.00035625	0.96843	0.00042875	0.16374	7.2494E-05	442.72756044537925	38.363	0.5587	38.705	38.379	38.938	0.34187					19	13	2	0	0	0	0.4196	1	3164	3164		45.952	0	1	101430			1402	4572	965	966	1687	1687					-0.006436650333284888
ALNVRPDL	8	Unmodified	_ALNVRPDL_					0	0	0			REV__chr7:101549223-101553326|33|17.09|0.05|8.53|+|1|COL26A1,COL26A1|1	REV__chr7:101549223-101553326|33|17.09|0.05|8.53|+|1|COL26A1,COL26A1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.260498046875	2	449.261259	896.507966	-0.13632	-6.1244E-05	-1.331	-0.00059798	-1.4674	-0.00065923	449.26055039529075	68.162	1.4065	68.547	67.946	69.352	0.38483					66	33	3	0	0	0	0.87479	1	7466	7466		30.504	0	1	1822600	+		1403	15896	966	967	1688	1688					0.055572046173210765
ALPAAIIWGRI	11	Unmodified	_ALPAAIIWGRI_					0	0	0		ENST00000520289.1_1_8:117661133-117668119:-|nuORF	ENST00000520289.1_1_8:117661133-117668119:-|nuORF	ENST00000520289.1_1_8:117661133-117668119:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8670043945312	2	590.863683	1179.71281	3.3796	0.0019969	0.94842	0.00056039	4.328	0.0025573	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.67493	1	11506	11506		35.618	5.3006	1	52150000			1404	13158	967	968	1689	1689					0.13014563427714165
ALPAAIIWGRI	11	Unmodified	_ALPAAIIWGRI_					0	0	0		ENST00000520289.1_1_8:117661133-117668119:-|nuORF	ENST00000520289.1_1_8:117661133-117668119:-|nuORF	ENST00000520289.1_1_8:117661133-117668119:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8672485351562	2	590.863683	1179.71281	0.84845	0.00050132	3.6717	0.0021695	4.5201	0.0026708	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.68378	2	11059	11059;11080		34.173	13.226	1	94771000			1405	13158	967	968	1690;1691	1690					0.13014563427714165
ALPAAIIWGRI	11	Unmodified	_ALPAAIIWGRI_					0	0	0		ENST00000520289.1_1_8:117661133-117668119:-|nuORF	ENST00000520289.1_1_8:117661133-117668119:-|nuORF	ENST00000520289.1_1_8:117661133-117668119:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.866943359375	2	590.863683	1179.71281	0.89156	0.00052679	3.7018	0.0021873	4.5934	0.0027141	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.60283	2	11077	11065;11077		44.117	19.914	1	84183000			1406	13158	967	968	1692;1693	1693					0.13014563427714165
ALPAAIIWGRI	11	Unmodified	_ALPAAIIWGRI_					0	0	0		ENST00000520289.1_1_8:117661133-117668119:-|nuORF	ENST00000520289.1_1_8:117661133-117668119:-|nuORF	ENST00000520289.1_1_8:117661133-117668119:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8671264648438	2	590.863683	1179.71281	1.3812	0.0008161	3.8747	0.0022894	5.2559	0.0031055	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.61774	8	12672	12540;12565;12620;12631;12642;12672;12708;12714		42.396	16.822	1	6168400			1407	13158	967	968	1694;1695;1696;1697;1698;1699;1700;1701	1699					0.13014563427714165
ALPAAIIWGRI	11	Unmodified	_ALPAAIIWGRI_					0	0	0		ENST00000520289.1_1_8:117661133-117668119:-|nuORF	ENST00000520289.1_1_8:117661133-117668119:-|nuORF	ENST00000520289.1_1_8:117661133-117668119:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8678588867188	2	590.863683	1179.71281	3.2055	0.001894	2.0239	0.0011959	5.2294	0.0030899	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.60283	5	12736	12630;12641;12736;12748;12755		44.117	23.17	1	6398400			1408	13158	967	968	1702;1703;1704;1705;1706	1704					0.13014563427714165
ALPAARLRLR	10	Unmodified	_ALPAARLRLR_					0	0	0		ENST00000366600.7_1_1:235658098-235667703:-|nuORF	ENST00000366600.7_1_1:235658098-235667703:-|nuORF	ENST00000366600.7_1_1:235658098-235667703:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8532104492188	2	568.872374	1135.73019	-1.3908	-0.00079118	-2.3404	-0.0013314	-3.7312	-0.0021226	568.8708776637442	102.56	0.29057	102.7	102.61	102.9	0.13569					9	6	2	0	0	0	0.37624	1	10736	10736		15.642	0	1	64962			1409	10513	968	969	1707	1707					0.1677590375334148
ALPAFQSSA	9	Unmodified	_ALPAFQSSA_					0	0	0			REV__ENST00000311573.9_1_1:155649295-155658075:-|nuORF	REV__ENST00000311573.9_1_1:155649295-155658075:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	446.23138427734375	2	446.232168	890.449782	-0.14666	-6.5446E-05	-0.91184	-0.00040689	-1.0585	-0.00047234	446.2316665805217	103.94	1.9863	103.93	103.31	105.29	-0.0035706					126	47	4	0	0	0	0.78536	1	11184	11184		29.15	2.4566	1	2023800	+		1410	24906	969	970	1708	1708					0.00017522972052574914
ALPAFQSSA	9	Unmodified	_ALPAFQSSA_					0	0	0			REV__ENST00000311573.9_1_1:155649295-155658075:-|nuORF	REV__ENST00000311573.9_1_1:155649295-155658075:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	446.2315979003906	2	446.232168	890.449782	1.573	0.00070191	-2.5471	-0.0011366	-0.97411	-0.00043468	446.230954277814	103.74	1.7619	103.78	103.07	104.83	0.041481					107	42	3	0	0	0	0.78536	1	11263	11263		29.15	4.9468	1	1977800	+		1411	24906	969	970	1709	1709					0.00017522972052574914
ALPANPIPVI	10	Unmodified	_ALPANPIPVI_					0	0	0		ENSG00000090060|ENST00000216277|PAPOLA;ENST00000555508.1_1_14:97029095-97031384:+|nuORF	ENSG00000090060|ENST00000216277|PAPOLA	ENSG00000090060|ENST00000216277|PAPOLA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.81396484375	2	502.810585	1003.60662	2.3403	0.0011767	3.7237	0.0018723	6.064	0.003049	502.8125095454433	97.334	3.7238	97.279	96.672	100.4	-0.055542					261	86	6	0	0	0	0.53935	5	10560	10426;10450;10560;10573;10584		53.351	9.2347	1	22474000			1412	1638	970	971	1710;1711;1712;1713;1714	1712					0.10495807862366746
ALPAPAHQSL	10	Unmodified	_ALPAPAHQSL_					0	0	0		ENSG00000179698|ENST00000323662|WDR97;nc|ENSG00000179698|A6NE52-2|WDR97	ENSG00000179698|ENST00000323662|WDR97	ENSG00000179698|ENST00000323662|WDR97	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.8137512207031	2	502.779816	1003.54508	-0.061807	-3.1075E-05	-2.9936	-0.0015051	-3.0554	-0.0015362	502.7790959985225	97.627	0.54758	97.683	97.59	98.138	0.056839					16	12	2	0	0	0	0.37624	1	10299	10299		32.812	0	1	57813			1413	7288	971	972	1715	1715					0.04344876163088429
ALPAPKQPLQ	10	Unmodified	_ALPAPKQPLQ_					0	0	0		chr11:60935443-60936747|30|20.93|0.08|8.05|+|0|TMEM132A,TMEM132A|1	chr11:60935443-60936747|30|20.93|0.08|8.05|+|0|TMEM132A,TMEM132A|1	chr11:60935443-60936747|30|20.93|0.08|8.05|+|0|TMEM132A,TMEM132A|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8170776367188	2	531.818941	1061.62333	-0.57494	-0.00030576	-2.9667	-0.0015777	-3.5416	-0.0018835	531.8173324364058	101.39	0.86312	101.39	101.04	101.9	0					47	20	3	0	0	0	0.86589	1	10314	10314		29.15	3.5755	1	388100			1414	104	972	973	1716	1716					0.09498308748334239
ALPASPIKPVN	11	Unmodified	_ALPASPIKPVN_					0	0	0		ENST00000398022.6_1_20:30754611-30754836:+|nuORF	ENST00000398022.6_1_20:30754611-30754836:+|nuORF	ENST00000398022.6_1_20:30754611-30754836:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8297119140625	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.68532	1	9011	9011		33.922	2.3918	1	6402500			1415	11170	973	974	1717	1717					0.10094577919812764
ALPAVVLE	8	Unmodified	_ALPAVVLE_					0	0	0		ENSG00000223601|ENST00000422359|EBLN1	ENSG00000223601|ENST00000422359|EBLN1	ENSG00000223601|ENST00000422359|EBLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2485656738281	2	406.249829	810.485105	-1.791	-0.00072759	-1.0283	-0.00041774	-2.8193	-0.0011453	406.2492919418848	111.27	0.62435	111.39	111.04	111.66	0.11118					49	21	3	0	0	0	0.88915	1	11995	11995		35.201	13.498	1	128170			1416	8700	974	975	1718	1718					0.07228185499843676
ALPAWRSL	8	Unmodified	_ALPAWRSL_					0	0	0			REV__ENST00000326317.10_1_17:78183109-78183520:-|nuORF	REV__ENST00000326317.10_1_17:78183109-78183520:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.263916015625	2	457.266345	912.518136	-1.2409	-0.00056743	-3.1044	-0.0014196	-4.3454	-0.001987	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.89043	1	7782	7782		35.618	2.1027	1	2957200	+		1417	25077	975	976	1719	1719					0.05837812342565485
ALPDLTALLHT	11	Unmodified	_ALPDLTALLHT_					0	0	0			REV__nc|ENSG00000166359|Q6ZMY6-2|WDR88	REV__nc|ENSG00000166359|Q6ZMY6-2|WDR88	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8322143554688	2	582.834788	1163.65502	-0.83199	-0.00048491	-2.8678	-0.0016715	-3.6998	-0.0021564	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.72918	1	9894	9894		26.693	6.6961	1	796430	+		1418	21284	976	977	1720	1720					0.07974256711599992
ALPFRPLQA	9	Unmodified	_ALPFRPLQA_					0	0	0		ENST00000564946.5_1_16:30666019-30666073:+|nuORF	ENST00000564946.5_1_16:30666019-30666073:+|nuORF	ENST00000564946.5_1_16:30666019-30666073:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8008117675781	2	506.800552	1011.58655	0.3226	0.0001635	1.0842	0.00054946	1.4068	0.00071296	506.80101494321997	46.369	1.6079	46.407	46.092	47.7	0.038181					96	46	3	0	0	0	0.7932	1	3507	3507		18.324	0.95945	1	231410			1419	13898	977	978	1721	1721					0.08122056922422871
ALPGRQCF	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ALPGRQCF_					1	0	0		ENST00000372703.1_1_1:40974852-40974987:+|nuORF	ENST00000372703.1_1_1:40974852-40974987:+|nuORF	ENST00000372703.1_1_1:40974852-40974987:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2330017089844	2	467.234187	932.453822	-0.45838	-0.00021417	-1.9039	-0.00088959	-2.3623	-0.0011038	467.23359025373514	64.723	2.0657	65.109	64.482	66.548	0.38615					153	52	5	0	0	0	0.92774	3	6961	6961;6996;7007		49.211	14.01	1	8112800			1420	10712	978	979	1722;1723;1724	1722					-0.015107108058941776
ALPGRQCF	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ALPGRQCF_					1	0	0		ENST00000372703.1_1_1:40974852-40974987:+|nuORF	ENST00000372703.1_1_1:40974852-40974987:+|nuORF	ENST00000372703.1_1_1:40974852-40974987:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.23394775390625	2	467.234187	932.453822	-0.26264	-0.00012271	-2.1411	-0.0010004	-2.4037	-0.0011231	467.23346633413524	64.606	2.155	65.159	64.517	66.672	0.55386					169	56	5	0	0	0	0.92774	2	6986	6986;7066		49.211	10.405	1	8508300			1421	10712	978	979	1725;1726	1725					-0.015107108058941776
ALPKINSH	8	Unmodified	_ALPKINSH_					0	0	0		ENST00000496538.1_1_1:156693891-156697171:-|nuORF;ENSG00000143319|ENST00000368219|ISG20L2	ENST00000496538.1_1_1:156693891-156697171:-|nuORF	ENST00000496538.1_1_1:156693891-156697171:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2558898925781	2	440.255977	878.497401	-0.82974	-0.0003653	-0.76393	-0.00033632	-1.5937	-0.00070162	440.2556367977485	60.313	1.0519	60.313	60.031	61.083	0.00051117					60	36	3	0	0	0	0.87479	1	5234	5234		30.504	5.0535	1	290170			1422	4617	979	980	1727	1727					0.05329221962892916
ALPKSARLLP	10	Unmodified	_ALPKSARLLP_					0	0	0			REV__ENST00000476365.2_1_20:30777007-30778297:-|nuORF	REV__ENST00000476365.2_1_20:30777007-30778297:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.3399658203125	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.86589	1	10108	10108		29.15	6.1071	1	1199500	+		1423	27328	980	981	1728	1728					0.1408658801931324
ALPKSARLLP	10	Unmodified	_ALPKSARLLP_					0	0	0			REV__ENST00000476365.2_1_20:30777007-30778297:-|nuORF	REV__ENST00000476365.2_1_20:30777007-30778297:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.3404541015625	2	533.342584	1064.67061	-1.5064	-0.00080343	-2.9287	-0.001562	-4.4351	-0.0023654	533.3409139496441	99.132	2.1048	99.317	98.763	100.87	0.18582					141	48	4	0	0	0	0.8608	1	10299	10299		34.173	3.6689	1	1837700	+		1424	27328	980	981	1729	1729					0.1408658801931324
ALPLFFELL	9	Unmodified	_ALPLFFELL_					0	0	0			REV__ENSG00000162881|ENST00000378661|OXER1	REV__ENSG00000162881|ENST00000378661|OXER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8170776367188	2	531.815336	1061.61612	-0.69524	-0.00036974	3.5815	0.0019047	2.8863	0.001535	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.76996	1	10183	10183		33.516	3.0119	1	1296000	+		1425	20858	981	982	1730	1730					0.08777576147895161
ALPLRGSAR	9	Unmodified	_ALPLRGSAR_					0	0	0			REV__ENSG00000196872|ENST00000397899|CRACDL	REV__ENSG00000196872|ENST00000397899|CRACDL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7902526855469	2	470.787976	939.561398	0.22344	0.00010519	4.4293	0.0020853	4.6527	0.0021905	470.78980973205034	44.363	1.3298	44.34	43.809	45.139	-0.023079					53	30	2	0	0	0	0.69624	1	3446	3446		40.778	3.7497	1	151650	+		1426	23177	982	983	1731	1731					0.08920002119850778
ALPPRPPPPA	10	Unmodified	_ALPPRPPPPA_					0	0	0		ENST00000494981.1_1_14:105935406-105936549:+|nuORF;ENST00000481635.1_1_14:105935922-105936549:+|nuORF;ENST00000552286.5_1_14:105932689-105936549:+|nuORF;ENST00000481206.1_1_14:105935538-105936549:+|nuORF;nc|ENSG00000182979|Q13330-3|MTA1;ENSG00000182979|ENST00000331320|MTA1	ENST00000494981.1_1_14:105935406-105936549:+|nuORF	ENST00000494981.1_1_14:105935406-105936549:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8027648925781	2	506.800552	1011.58655	-0.1225	-6.2083E-05	1.1991	0.00060769	1.0766	0.00054561	506.8011249172422	46.216	2.1586	46.137	45.418	47.576	-0.079006					85	63	2	0	0	0	0.86201	1	3317	3317		24.203	3.2558	1	271040			1427	7489	983	984	1732	1732					0.08122056922411502
ALPPTLTTS	9	Unmodified	_ALPPTLTTS_					0	0	0		ENST00000450804.3_1_11:72281759-72282275:+|nuORF	ENST00000450804.3_1_11:72281759-72282275:+|nuORF	ENST00000450804.3_1_11:72281759-72282275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7543640136719	2	450.755475	899.496398	-1.4711	-0.00066312	-1.5388	-0.00069364	-3.01	-0.0013568	450.7547246648738	79.827	2.1578	79.926	78.179	80.337	0.098701					99	70	2	0	0	0	0.77546	1	7550	7550		31.955	7.7521	1	155440			1428	11895	984	985	1733	1733					0.0426296280331826
ALPPVLTT	8	Unmodified	_ALPPVLTT_					0	0	0		ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24853515625	2	406.249829	810.485105	-0.18598	-7.5555E-05	-2.5531	-0.0010372	-2.7391	-0.0011128	406.2487203598378	111.64	0.79961	111.58	111.26	112.06	-0.059937					46	25	2	0	0	0	0.80963	1	12169	12169		15.636	0	1	69533			1429	5325	985	986	1734	1734					0.07228185499832307
ALPRIWEK	8	Unmodified	_ALPRIWEK_					0	0	0			REV__ENSG00000037637|ENST00000375592|FBXO42	REV__ENSG00000037637|ENST00000375592|FBXO42	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8015441894531	2	506.800552	1011.58655	-0.50987	-0.0002584	1.9226	0.00097437	1.4127	0.00071597	506.80138378201497	51.594	1.2506	51.571	50.944	52.195	-0.02343					45	30	2	0	0	0	0.80706	2	4540	4540;4563		31.955	6.5047	1	100870	+		1430	16297	986	987	1735;1736	1735					0.08122056922411502
ALPRRWPL	8	Unmodified	_ALPRRWPL_					0	0	0		ENSG00000205832|ENST00000444310|C16orf96	ENSG00000205832|ENST00000444310|C16orf96	ENSG00000205832|ENST00000444310|C16orf96	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3480529785156	2	504.808711	1007.60287	2.0861	0.0010531	-2.9802	-0.0015044	-0.89415	-0.00045137	504.8070233405885	35.877	1.0731	36.317	35.959	37.033	0.44043					37	26	3	0	0	0	0.4196	1	2895	2895		35.201	6.9464	1	314500			1431	8542	987	988	1737	1737					0.09937182879173179
ALPRSRGPRP	10	Unmodified	_ALPRSRGPRP_					0	0	0		ENST00000496873.1_1_13:114144983-114145259:-|nuORF	ENST00000496873.1_1_13:114144983-114145259:-|nuORF	ENST00000496873.1_1_13:114144983-114145259:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.829833984375	2	553.830706	1105.64686	1.7761	0.00098364	-2.9855	-0.0016535	-1.2094	-0.00066981	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.86272	1	9134	9134		24.519	0.99649	1	1628400			1432	12797	988	989	1738	1738					0.09826167305527633
ALPSALLAS	9	Unmodified	_ALPSALLAS_					0	0	0			REV__ENSG00000185149|ENST00000329476|NPY2R	REV__ENSG00000185149|ENST00000329476|NPY2R	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7515563964844	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.806	1	76.856	76.356	77.356	0.049194								0	0	0	0.31828	1	7431	7431		24.203	1.1603	1		+		1433	22740	989	990	1739	1739					0.06383284011519663
ALPSAMCD	8	Unmodified	_ALPSAMCD_					0	0	0			REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.1703796386719	2	404.172407	806.330261	-1.5918	-0.00064335	-4.3613	-0.0017627	-5.953	-0.0024061	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.86288	1	7400	7400		26.796	3.7594	1	6183600	+		1434	29828	990	991	1740	1740					-0.08065129968531437
ALPSCTHHES	10	Unmodified	_ALPSCTHHES_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	541.58251953125	2	541.240198	1080.46584	0.16477	8.918E-05	-4.2738	-0.0023132	-4.109	-0.002224	541.2393274702299	25.611	0.35926	25.716	25.479	25.839	0.1054					22	17	2	0	0	0	0.37624	1	933	933		14.865	0	1	45910	+		1435	16905	991	992	1741	1741					-0.07117138853368488
ALPSRILLWK	10	Unmodified	_ALPSRILLWK_					0	0	0		nc|ENSG00000162576|Q9BRK3-2|MXRA8;ENSG00000162576|ENST00000309212|MXRA8;nc|ENSG00000162576|Q9BRK3-4|MXRA8	nc|ENSG00000162576|Q9BRK3-2|MXRA8;ENSG00000162576|ENST00000309212|MXRA8	nc|ENSG00000162576|Q9BRK3-2|MXRA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.8802490234375	2	598.879333	1195.74411	-0.39152	-0.00023447	-0.42446	-0.0002542	-0.81598	-0.00048867	598.8789120433614	60.901	1.3306	61.29	60.9	62.23	0.38945					78	37	3	0	0	0	0.30286	2	6485	6475;6485		72.243	20.076	1	2011500			1436	15045;5698	992	993	1742;1743	1743					0.15407136461794835
ALPSRILLWK	10	Unmodified	_ALPSRILLWK_					0	0	0		nc|ENSG00000162576|Q9BRK3-2|MXRA8;ENSG00000162576|ENST00000309212|MXRA8;nc|ENSG00000162576|Q9BRK3-4|MXRA8	nc|ENSG00000162576|Q9BRK3-2|MXRA8;ENSG00000162576|ENST00000309212|MXRA8	nc|ENSG00000162576|Q9BRK3-2|MXRA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.8780517578125	2	598.879333	1195.74411	-0.59232	-0.00035473	-0.23099	-0.00013833	-0.82331	-0.00049306	598.8790492821305	60.727	1.1173	61.28	60.965	62.082	0.55323					70	32	3	0	0	0	0.49268	2	6495	6463;6495		56.434	15.007	1	2825300			1437	15045;5698	992	993	1744;1745	1745					0.15407136461794835
ALPTFLTL	8	Unmodified	_ALPTFLTL_					0	0	0			REV__nc|ENSG00000112337|O00624-2|SLC17A2	REV__nc|ENSG00000112337|O00624-2|SLC17A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2633972167969	2	438.265479	874.516405	-1.9277	-0.00084486	-2.8186	-0.0012353	-4.7463	-0.0020801	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.85277	1	2260	2260		25.45	0	1	3507500	+		1438	17942	993	994	1746	1746					0.07412758533939723
ALPTYISTYQ	10	Unmodified	_ALPTYISTYQ_					0	0	0			REV__nc|ENSG00000182670|P53804-3|TTC3	REV__nc|ENSG00000182670|P53804-3|TTC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.7949829101562	2	578.797872	1155.58119	-0.36215	-0.00020961	-2.7242	-0.0015768	-3.0863	-0.0017864	578.796099045331	35.151	0.72892	35.398	35.091	35.82	0.24769					44	18	3	0	0	0	0.77314	1	2657	2657		40.778	0.20554	1	725970	+		1439	22541	994	995	1747	1747					0.009622885492944988
ALQIVELHA	9	Unmodified	_ALQIVELHA_					0	0	0			REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.2896423339844	2	497.290017	992.565481	-0.24856	-0.0001236	-0.98177	-0.00048823	-1.2303	-0.00061183	497.2896308564966	71.699	0.57545	72.249	71.99	72.565	0.55008					30	13	3	0	0	0	0.39977	1	8033	8033		57.811	8.2752	1	266610	+		1440	20201	995	996	1748	1748					0.06890046822888962
ALQKANNRLLK	11	Unmodified	_ALQKANNRLLK_					0	0	0		nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	nc|ENSG00000127914|Q99996-5|AKAP9	nc|ENSG00000127914|Q99996-5|AKAP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5979919433594	3	423.598094	1267.77245	2.8995	0.0012282	-3.9608	-0.0016778	-1.0614	-0.0004496	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.7342	1	11649	11649		22.562	6.0317	1	6928400			1441	3517	996	997	1749	1749					0.1492783437106482
ALQKEKGKPLK	11	Unmodified	_ALQKEKGKPLK_					0	0	0			REV__ENSG00000124143|ENST00000373345|ARHGAP40	REV__ENSG00000124143|ENST00000373345|ARHGAP40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9325256347656	3	413.930962	1238.77106	1.6433	0.00068023	2.1649	0.00089611	3.8082	0.0015763	413.9318142026393	43.114	2.2589	43.114	42.157	44.416	0.00016785					149	54	3	0	0	0	0.72374	1	3390	3390		27.644	5.0823	1	500010	+		1442	18561	997	998	1750	1750					0.161222002823024
ALQLLFLILPP	11	Unmodified	_ALQLLFLILPP_					0	0	0		nc|ENSG00000213390|Q14CB8-6|ARHGAP19;nc|ENSG00000213390|Q14CB8-7|ARHGAP19;nc|ENSG00000213390|Q14CB8-3|ARHGAP19;ENSG00000213390|ENST00000358531|ARHGAP19;nc|ENSG00000213390|Q14CB8-2|ARHGAP19;nc|ENSG00000213390|Q14CB8-5|ARHGAP19	nc|ENSG00000213390|Q14CB8-6|ARHGAP19	nc|ENSG00000213390|Q14CB8-6|ARHGAP19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.266845703125	3	413.268804	1236.78458	0.21308	8.806E-05	-1.6446	-0.00067965	-1.4315	-0.00059159	413.2670936743631	41.866	2.062	41.835	40.73	42.792	-0.030991					122	53	4	0	0	0	0.7896	1	2962	2962		13.508	0.053899	1	252870			1443	8587	998	999	1751	1751					0.17566058061561307
ALQLSRHN	8	Unmodified	_ALQLSRHN_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.7562255859375	2	469.761958	937.509363	-0.023436	-1.1009E-05	-3.1496	-0.0014796	-3.173	-0.0014906	469.76032512029695	40.348	1.0077	40.3	40.046	41.054	-0.04789					61	38	2	0	0	0	0.86677	1	2608	2608		27.882	2.3082	1	392540			1444	1741	999	1000	1752	1752					0.03810838706078812
ALQNHELWAL	10	Unmodified	_ALQNHELWAL_					0	0	0			REV__ENSG00000173110|ENST00000309758|HSPA6	REV__ENSG00000173110|ENST00000309758|HSPA6	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.858154296875	2	597.81693	1193.61931	-1.4057	-0.00084037	-1.7326	-0.0010358	-3.1383	-0.0018762	597.8152100299982	18.105	0.081705	18.105	18.068	18.149	0					6	3	2	0	0	0	0.37624	1	271	271		20.947	0	1	12575	+		1445	21889	1000	1001	1753	1753					0.0302421925462113
ALQPPVLGLQA	11	Unmodified	_ALQPPVLGLQA_					0	0	0		ENST00000549198.1_1_12:53342525-53343518:-|nuORF;ENST00000551318.1_1_12:53342525-53343546:-|nuORF	ENST00000549198.1_1_12:53342525-53343518:-|nuORF	ENST00000549198.1_1_12:53342525-53343518:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8303833007812	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.7342	1	9184	9184		25.574	1.3713	1	5453100			1446	13631	1001	1002	1754	1754					0.10094577919812764
ALQQCHGDP	9	Unmodified	_ALQQCHGDP_					0	0	0		ENST00000315150.9_1_3:128808380-128808617:-|nuORF	ENST00000315150.9_1_3:128808380-128808617:-|nuORF	ENST00000315150.9_1_3:128808380-128808617:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71795654296875	2	484.716359	967.418164	1.0671	0.00051723	2.8185	0.0013662	3.8855	0.0018834	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.76255	1	11794	11794		35.618	1.4457	1	7522200			1447	9969	1002	1003	1755	1755					-0.06684793053545945
ALQRHGAS	8	Unmodified	_ALQRHGAS_					0	0	0		nc|ENSG00000131779|O96011-2|PEX11B;ENSG00000131779|ENST00000369306|PEX11B	nc|ENSG00000131779|O96011-2|PEX11B	nc|ENSG00000131779|O96011-2|PEX11B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2273864746094	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.884	1	7891	7891		33.516	0	1	743780			1448	3747	1003	1004	1756	1756					0.015265941262327942
ALQRHRAAYSA	11	Unmodified	_ALQRHRAAYSA_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54;ENST00000342887.1_1_12:97043703-97159031:+|nuORF	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3359375	2	622.336353	1242.65815	0.74466	0.00046343	-0.51938	-0.00032323	0.22528	0.0001402	622.3359336056161	110.94	1.6886	110.97	110.28	111.96	0.031738					155	57	4	0	0	0	0.74405	1	12183	12183		9.1829	0	1	299380			1449	7939	1004	1005	1757	1757					0.046529446090062265
ALQSTPSIL	9	Unmodified	_ALQSTPSIL_					0	0	0			REV__nc|ENSG00000196277|Q14831-2|GRM7	REV__nc|ENSG00000196277|Q14831-2|GRM7	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2677307128906	2	465.26875	928.522947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.366	1	80.366	79.866	80.866	0								0	0	0	0.28009	1	7415	7415		39.253	4.1008	1		+		1450	30128	1005	1006	1758	1758					0.05582651694669494
ALQVALGAH	9	Unmodified	_ALQVALGAH_					0	0	0		nc|ENSG00000130299|Q969Y2-3|GTPBP3;ENSG00000130299|ENST00000324894|GTPBP3;ENST00000598038.5_1_19:17448347-17452509:+|nuORF;nc|ENSG00000130299|Q969Y2-4|GTPBP3;nc|ENSG00000130299|Q969Y2-2|GTPBP3	REV__ENST00000412962.4_3_1:16950806-16950896:-|nuORF	REV__ENST00000412962.4_3_1:16950806-16950896:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2545166015625	2	440.255977	878.497401	-1.0794	-0.00047521	-0.44173	-0.00019447	-1.5211	-0.00066968	440.25573050255707	67.457	0.77168	67.51	67.2	67.972	0.052368					65	27	4	0	0	0	0.67235	1	5989	5989		42.474	5.3154	1	460120			1451	3631	1006	1007	1759	1759					0.05329221962904285
ALQVALGAH	9	Unmodified	_ALQVALGAH_					0	0	0		nc|ENSG00000130299|Q969Y2-3|GTPBP3;ENSG00000130299|ENST00000324894|GTPBP3;ENST00000598038.5_1_19:17448347-17452509:+|nuORF;nc|ENSG00000130299|Q969Y2-4|GTPBP3;nc|ENSG00000130299|Q969Y2-2|GTPBP3	REV__ENST00000412962.4_3_1:16950806-16950896:-|nuORF	REV__ENST00000412962.4_3_1:16950806-16950896:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	440.255977	878.497401	0.53539	0.00023571	-2.119	-0.00093291	-1.5836	-0.0006972	440.254928206011	67.151	0.53613	67.179	66.911	67.447	0.02858	-0.11725	-0.00098906	NaN	42.474	46	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118370			1452	3631	1006	1007							0.05329221962904285
ALRFVVPI	8	Unmodified	_ALRFVVPI_					0	0	0			REV__ENSG00000130159|ENST00000270517|ECSIT	REV__ENSG00000130159|ENST00000270517|ECSIT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26397705078125	2	457.794738	913.574923	-0.1308	-5.988E-05	1.3077	0.00059864	1.1769	0.00053876	457.7961030553291	81.55	0.37332	81.614	81.491	81.865	0.064392					10	8	2	0	0	0	0.4196	1	8018	8018		14.664	1.7049	1	24180	+		1453	18851	1007	1008	1760	1760					0.11467859899096311
ALRFVVPI	8	Unmodified	_ALRFVVPI_					0	0	0			REV__ENSG00000130159|ENST00000270517|ECSIT	REV__ENSG00000130159|ENST00000270517|ECSIT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.2779541015625	2	457.794738	913.574923	-2.4045	-0.0011008	4.3453	0.0019893	1.9408	0.00088848	457.7969934231136	42.007	0.50834	42.421	42.237	42.745	0.4139					19	12	2	0	0	0	0.4196	1	3737	3737		20.482	2.1574	1	123370	+		1454	18851	1007	1008	1761	1761					0.11467859899096311
ALRHALAKESL	11	Unmodified	_ALRHALAKESL_					0	0	0		ENSG00000182472|ENST00000328867|CAPN12	ENSG00000182472|ENST00000328867|CAPN12	ENSG00000182472|ENST00000328867|CAPN12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8587036132812	2	604.859129	1207.70371	0.10436	6.3124E-05	-1.1371	-0.00068781	-1.0328	-0.00062468	604.8584167241106	82.662	2.6581	83.136	82.878	85.536	0.47383					100	64	2	0	0	0	0.72374	1	9679	9679		18.262	0	1	1770100			1455	7457	1008	1009	1762	1762					0.10816170071370834
ALRKSLPDKKL	11	Unmodified	_ALRKSLPDKKL_					0	0	0		ENSG00000221947|ENST00000408926|XKR9	ENSG00000221947|ENST00000408926|XKR9	ENSG00000221947|ENST00000408926|XKR9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.60662841796875	3	423.606478	1267.79761	0.012697	5.3787E-06	0.73162	0.00030992	0.74431	0.0003153	423.60665539685334	15.736	0.19708	15.794	15.7	15.898	0.057872					11	5	3	0	0	0	0.74771	1	70	70		22.562	4.0305	1	289490			1456	8688	1009	1010	1763	1763					0.17441889173642267
ALRKSLPDKKL	11	Unmodified	_ALRKSLPDKKL_					0	0	0		ENSG00000221947|ENST00000408926|XKR9	ENSG00000221947|ENST00000408926|XKR9	ENSG00000221947|ENST00000408926|XKR9	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	423.606478	1267.79761	-1.863	-0.00078916	2.2869	0.00096876	0.42397	0.0001796	423.60735739277055	15.512	0.27237	15.561	15.404	15.677	0.04908	-0.12447	0.00097023	NaN	22.562	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153350			1457	8688	1009	1010							0.17441889173642267
ALRKSLPDKKL	11	Unmodified	_ALRKSLPDKKL_					0	0	0		ENSG00000221947|ENST00000408926|XKR9	ENSG00000221947|ENST00000408926|XKR9	ENSG00000221947|ENST00000408926|XKR9	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	423.606478	1267.79761	0.51522	0.00021825	-0.11299	-4.7862E-05	0.40224	0.00017039	423.60620249603153	15.725	0.23169	15.701	15.595	15.827	-0.024035	0.015501	-0.0020796	NaN	22.562	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	234820			1458	8688	1009	1010							0.17441889173642267
ALRLELRRTP	10	Unmodified	_ALRLELRRTP_					0	0	0			REV__ENST00000266671.9_1_12:76426245-76426365:-|nuORF	REV__ENST00000266671.9_1_12:76426245-76426365:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.92205810546875	3	408.922689	1223.74624	-1.7912	-0.00073246	0.82572	0.00033766	-0.96547	-0.0003948	408.92296036119325	104.35	2.8249	104.52	103.85	106.67	0.17096					215	70	5	0	0	0	0.8651	1	11144	11144		37.508	19.675	1	5290200	+		1459	24503	1010	1011	1764	1764					0.1433156519960903
ALRLGPPRRG	10	Unmodified	_ALRLGPPRRG_					0	0	0			REV__ENSG00000234965|ENST00000621082|SHISA8	REV__ENSG00000234965|ENST00000621082|SHISA8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.8400268554688	2	546.841074	1091.66759	0.19665	0.00010754	-2.8678	-0.0015682	-2.6712	-0.0014607	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.86589	1	10644	10644		29.15	0	1	55511000	+		1460	23781	1011	1012	1765	1765					0.12542757685150718
ALRLLFRY	8	Unmodified	_ALRLLFRY_					0	0	0		ENST00000552421.5_1_14:75230143-75230275:+|nuORF	ENST00000552421.5_1_14:75230143-75230275:+|nuORF	ENST00000552421.5_1_14:75230143-75230275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3246459960938	2	526.324194	1050.63383	-0.53497	-0.00028157	1.5071	0.00079323	0.97214	0.00051166	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.81548	1	5126	5126		20.482	1.1219	1	220370			1461	13680	1012	1013	1766	1766					0.110543361934333
ALRPPPPLGT	10	Unmodified	_ALRPPPPLGT_					0	0	0		ENSG00000126562|ENST00000246914|WNK4;nc|ENSG00000126562|Q96J92-3|WNK4	ENSG00000126562|ENST00000246914|WNK4	ENSG00000126562|ENST00000246914|WNK4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8039245605469	2	509.805834	1017.59712	-0.93407	-0.00047619	-3.0736	-0.0015669	-4.0077	-0.0020431	509.8042014095356	84.682	2.4835	84.682	83.134	85.618	0					128	59	3	0	0	0	0.85939	1	8070	8070		23.042	0.46283	1	609880			1462	3457	1013	1014	1767	1767					0.08902039576844345
ALRPSTSRSLY	11	Unmodified	_ALRPSTSRSLY_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.56671142578125	3	417.566571	1249.67788	1.0829	0.00045217	-0.83306	-0.00034786	0.2498	0.00010431	417.56618935661135	36.21	0.97444	36.492	36.077	37.052	0.28173					69	23	4	0	0	0	0.48313	2	2828	2816;2828		79.07	42.542	1	3475800			1463	869	1014	1015	1768;1769	1769					0.0630327582910013
ALRPSTSRSLY	11	Unmodified	_ALRPSTSRSLY_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.5667419433594	3	417.566571	1249.67788	1.5563	0.00064986	-1.3028	-0.000544	0.25351	0.00010586	417.566009299332	36.081	1.0477	36.521	36.149	37.197	0.44043					71	25	5	0	0	0	0.50531	3	2829	2829;2840;2855		86.189	62.811	1	3022200			1464	869	1014	1015	1770;1771;1772	1770					0.0630327582910013
ALRPSTSRSLY	11	Unmodified	_ALRPSTSRSLY_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	417.566571	1249.67788	-0.091467	-3.8194E-05	1.5597	0.00065128	1.4682	0.00061308	417.5668699410541	36.682	0.35708	36.664	36.509	36.866	-0.018673	0.10634	0.0031784	NaN	79.07	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20032			1465	869	1014	1015							0.0630327582910013
ALRPSTSRSLY	11	Unmodified	_ALRPSTSRSLY_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	417.566571	1249.67788	1.1422	0.00047694	-1.0147	-0.00042372	0.12745	5.3219E-05	417.56626743134655	36.673	0.40264	36.684	36.436	36.839	0.011173	0.12654	-4.6616E-05	NaN	79.07	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17431			1466	869	1014	1015							0.0630327582910013
ALRPSTSRSLY	11	Unmodified	_ALRPSTSRSLY_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	417.566571	1249.67788	0.1539	6.4262E-05	0.16263	6.791E-05	0.31653	0.00013217	417.5666344929893	36.4	0.39453	36.503	36.346	36.74	0.10306	-0.053964	0.0014283	NaN	79.07	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94588			1467	869	1014	1015							0.0630327582910013
ALRPSTSRSLY	11	Unmodified	_ALRPSTSRSLY_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	417.566571	1249.67788	-0.065053	-2.7164E-05	0.072199	3.0148E-05	0.0071461	2.984E-06	417.5665785965888	36.541	0.61128	36.48	36.127	36.738	-0.060333	-0.077031	0.001315	NaN	79.07	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78033			1468	869	1014	1015							0.0630327582910013
ALRQLRSPRRA	11	Unmodified	_ALRQLRSPRRA_					0	0	0		ENSG00000168118|ENST00000366690|RAB4A	ENSG00000168118|ENST00000366690|RAB4A	ENSG00000168118|ENST00000366690|RAB4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.94000244140625	3	441.940855	1322.80073	0.44003	0.00019447	-2.9046	-0.0012837	-2.4646	-0.0010892	441.9393914889037	56.404	2.26	56.437	55.731	57.991	0.033184					145	81	3	0	0	0	0.77511	1	5132	5132		16.53	1.1924	1	750870			1469	6372	1015	1016	1773	1773					0.15224577071035128
ALRRLPCT	8	Unmodified	_ALRRLPCT_					0	0	0			REV__ENST00000517806.5_1_8:101157694-101158003:-|nuORF	REV__ENST00000517806.5_1_8:101157694-101158003:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2684326171875	2	465.271104	928.527655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.809	1	80.809	80.309	81.309	0								0	0	0	0.29755	1	7472	7472		24.203	1.1603	1		+		1470	28050	1016	1017	1774	1774					0.060532573564501035
ALRSVLFQIF	10	Unmodified	_ALRSVLFQIF_					0	0	0		ENSG00000145569|ENST00000274217|OTULINL	ENSG00000145569|ENST00000274217|OTULINL	ENSG00000145569|ENST00000274217|OTULINL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3587036132812	2	597.355691	1192.69683	1.8736	0.0011192	1.6831	0.0010054	3.5566	0.0021246	597.3562887169959	99.941	2.3701	100.27	99.147	101.52	0.33294					172	60	4	0	0	0	0.86718	1	12035	12035		27.882	3.3631	1	4830100			1471	4777	1017	1018	1775	1775					0.10818857190793096
ALRVSDWFQQ	10	Unmodified	_ALRVSDWFQQ_					0	0	0			REV__ENSG00000198092|ENST00000356291|TMPRSS11F	REV__ENSG00000198092|ENST00000356291|TMPRSS11F	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.8223876953125	2	625.319837	1248.62512	-0.61694	-0.00038578	1.0323	0.00064554	0.4154	0.00025976	625.3204345211741	64.692	1.0387	64.692	64.408	65.447	0					102	48	3	0	0	0	0.37624	1	5678	5678		47.96	3.5823	1	308710	+		1472	23298	1018	1019	1776	1776					0.010753177662763846
ALRWRKRRWEW	11	Unmodified	_ALRWRKRRWEW_					0	0	0		ENST00000456291.1_3_9:123638279-123638699:-|nuORF	ENST00000456291.1_3_9:123638279-123638699:-|nuORF	ENST00000456291.1_3_9:123638279-123638699:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.5843811035156	4	411.485197	1641.91168	1.001	0.00041188	-3.0472	-0.0012539	-2.0462	-0.00084199	411.48407588104436	25.868	0.77176	25.611	25.218	25.99	-0.2572					42	17	3	0	0	0	0.18258	1	1315	1315		8.7993	7.3806	1	124720			1473	11965	1019	1020	1777	1777					0.1164021677909659
ALRWRKRRWEW	11	Unmodified	_ALRWRKRRWEW_					0	0	0		ENST00000456291.1_3_9:123638279-123638699:-|nuORF	ENST00000456291.1_3_9:123638279-123638699:-|nuORF	ENST00000456291.1_3_9:123638279-123638699:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		4	411.485197	1641.91168	-1.9297	-0.00079402	-0.25326	-0.00010421	-2.1829	-0.00089824	411.48507590928324	25.38	0.89121	25.443	24.965	25.857	0.063122	-0.033067	0.0027625	NaN	12.957	92	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139510			1474	11965	1019	1020							0.1164021677909659
ALRYKIVAE	9	Unmodified	_ALRYKIVAE_					0	0	0			REV__L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|30|1|sense	REV__L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|30|1|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8184814453125	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.78983	1	8148	8148		27.882	1.0861	1	859730	+		1475	29475	1020	1021	1778	1778					0.09498308748334239
ALRYVDLI	8	Unmodified	_ALRYVDLI_					0	0	0			REV__nc|ENSG00000099910|Q53GT1-3|KLHL22	REV__nc|ENSG00000099910|Q53GT1-3|KLHL22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.7867736816406	2	481.78711	961.559667	0.30532	0.0001471	-0.31173	-0.00015019	-0.0064033	-3.0851E-06	481.7867427588549	49.578	0.48924	50.038	49.748	50.237	0.45983					26	11	3	0	0	0	0.91977	1	4832	4832		45.952	1.8352	1	518600	+		1476	17116	1021	1022	1779	1779					0.07734948311224343
ALRYVDLI	8	Unmodified	_ALRYVDLI_					0	0	0			REV__nc|ENSG00000099910|Q53GT1-3|KLHL22	REV__nc|ENSG00000099910|Q53GT1-3|KLHL22	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	481.78711	961.559667	0.30532	0.0001471	-0.31173	-0.00015019	-0.0064033	-3.0851E-06	481.7867427588549	49.578	0.48924	50.038	49.748	50.237	0.45983	-0.094094	-0.00015483	NaN	45.952	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	518600	+		1477	17116	1021	1022							0.07734948311224343
ALRYVDLI	8	Unmodified	_ALRYVDLI_					0	0	0			REV__nc|ENSG00000099910|Q53GT1-3|KLHL22	REV__nc|ENSG00000099910|Q53GT1-3|KLHL22	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	481.78711	961.559667	0.0054869	2.6435E-06	0.097116	4.6789E-05	0.1026	4.9433E-05	481.7869348235545	49.381	0.56478	50.226	49.952	50.517	0.84501	0.094094	0.00023912	NaN	45.952	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	630670	+		1478	17116	1021	1022							0.07734948311224343
ALSAFLVLVF	10	Unmodified	_ALSAFLVLVF_					0	0	0		ENSG00000128039|ENST00000264228|SRD5A3	ENSG00000128039|ENST00000264228|SRD5A3	ENSG00000128039|ENST00000264228|SRD5A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3304443359375	2	540.328611	1078.64267	1.1739	0.0006343	1.7793	0.00096142	2.9532	0.0015957	540.3294613152358	88.6	3.7458	88.65	87.166	90.912	0.050415					224	88	3	0	0	0	0.86305	1	9087	9087		31.955	2.8053	1	423560			1479	3527	1022	1023	1780	1780					0.1064926503922834
ALSDLEITL	9	Unmodified	_ALSDLEITL_					0	0	0		nc|ENSG00000073712|Q96AC1-2|FERMT2;ENSG00000073712|ENST00000341590|FERMT2;nc|ENSG00000073712|Q96AC1-3|FERMT2	nc|ENSG00000073712|Q96AC1-2|FERMT2	nc|ENSG00000073712|Q96AC1-2|FERMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7728576660156	2	487.773865	973.533177	-1.6537	-0.00080662	2.0865	0.0010177	0.4328	0.00021111	487.7745996241761	87.916	0.83461	88.085	87.781	88.615	0.16922					50	19	4	0	0	0	0.09311	1	8647	8647		94.006	3.2298	1	732030			1480	1296	1023	1024	1781	1781					0.04535214629231632
ALSESKIH	8	Unmodified	_ALSESKIH_					0	0	0		ENST00000315367.3_1_8:96166742-96166778:+|nuORF	ENST00000315367.3_1_8:96166742-96166778:+|nuORF	ENST00000315367.3_1_8:96166742-96166778:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7447814941406	2	442.745442	883.476331	0.70525	0.00031225	-2.1241	-0.00094045	-1.4189	-0.0006282	442.7443686579111	91.271	2.0811	91.72	90.611	92.692	0.44958					87	49	3	0	0	0	0.87479	2	10829	10829;10866		38.806	2.6214	1	3166400			1481	9976	1024	1025	1782;1783	1782					0.02993211863383749
ALSESKIH	8	Unmodified	_ALSESKIH_					0	0	0		ENST00000315367.3_1_8:96166742-96166778:+|nuORF	ENST00000315367.3_1_8:96166742-96166778:+|nuORF	ENST00000315367.3_1_8:96166742-96166778:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.74493408203125	2	442.745442	883.476331	-0.84967	-0.00037619	-0.44682	-0.00019783	-1.2965	-0.00057401	442.74508565704974	91.361	1.8975	91.832	90.855	92.753	0.47068					98	45	4	0	0	0	0.88944	1	10859	10859		57.811	7.7867	1	3563500			1482	9976	1024	1025	1784	1784					0.02993211863383749
ALSESKIH	8	Unmodified	_ALSESKIH_					0	0	0		ENST00000315367.3_1_8:96166742-96166778:+|nuORF	ENST00000315367.3_1_8:96166742-96166778:+|nuORF	ENST00000315367.3_1_8:96166742-96166778:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	442.745442	883.476331	0.66357	0.00029379	-1.7617	-0.00078	-1.0982	-0.00048621	442.74446013454883	91.838	0.77042	91.994	91.638	92.408	0.15614	0.13445	-0.0004492	NaN	57.811	40	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	460360			1483	9976	1024	1025							0.02993211863383749
ALSGITASSAY	11	Unmodified	_ALSGITASSAY_					0	0	0		ENST00000480479.5_1_1:1324040-1326370:-|nuORF;ENST00000505849.5_1_1:1324040-1326969:-|nuORF	ENST00000480479.5_1_1:1324040-1326370:-|nuORF	ENST00000480479.5_1_1:1324040-1326370:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.7686767578125	2	520.766571	1039.51859	0.081424	4.2403E-05	3.4183	0.0017802	3.4998	0.0018226	520.7681061740968	83.04	1.3308	83.471	82.795	84.126	0.43108					78	31	4	0	0	0	0.29693	1	9645	9645		74.255	2.8771	1	1676400			1484	12438	1025	1026	1785	1785					0.0004114248110909102
ALSIRLPAP	9	Unmodified	_ALSIRLPAP_					0	0	0			REV__ENSG00000135973|ENST00000258456|GPR45	REV__ENSG00000135973|ENST00000258456|GPR45	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.7730712890625	2	469.295102	936.575651	0.67051	0.00031467	0.10839	5.0867E-05	0.7789	0.00036554	469.297669590123	20.981	0.12647	20.965	20.914	21.04	-0.016428					9	4	3	0	0	0	0.20789	1	533	533		12.207	0	1	58041	+		1485	19276	1026	1027	1786	1786					0.10482654548127357
ALSLPLAAS	9	Unmodified	_ALSLPLAAS_					0	0	0			REV__ENST00000345990.8_2_5:122848044-122848200:+|nuORF	REV__ENST00000345990.8_2_5:122848044-122848200:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7516784667969	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.811	1	77.864	77.364	78.364	0.052696								0	0	0	0.32469	1	7537	7537		21.96	2.5999	1		+		1486	25318	1027	1028	1787	1787					0.06383284011519663
ALSLRRRGER	10	Unmodified	_ALSLRRRGER_					0	0	0		ENST00000435805.6_1_10:43047647-43047983:-|nuORF	ENST00000435805.6_1_10:43047647-43047983:-|nuORF	ENST00000435805.6_1_10:43047647-43047983:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.24798583984375	3	405.246055	1212.71634	1.0635	0.00043097	1.5645	0.000634	2.628	0.001065	405.2465768037405	23.434	2.4302	22.86	22.409	24.839	-0.57415					118	56	3	0	0	0	0.71918	1	1127	1127		43.651	0	1	383090			1487	11716	1028	1029	1788	1788					0.11848626254254668
ALSLSTTF	8	Unmodified	_ALSLSTTF_					0	0	0		ENSG00000112796|ENST00000371383|ENPP5	ENSG00000112796|ENST00000371383|ENPP5	ENSG00000112796|ENST00000371383|ENPP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.2279052734375	2	420.229094	838.443634	0.042435	1.7832E-05	-3.1023	-0.0013037	-3.0599	-0.0012859	420.2277069932212	78.969	5.8282	79.518	76.332	82.16	0.54945					273	145	3	0	0	0	0.90465	1	9110	9110		40.573	3.4135	1	581780			1488	2682	1029	1030	1789	1789					0.017950047405292935
ALSLVLPRPG	10	Unmodified	_ALSLVLPRPG_					0	0	0		ENST00000534680.5_1_8:145751978-145752622:-|nuORF	ENST00000534680.5_1_8:145751978-145752622:-|nuORF	ENST00000534680.5_1_8:145751978-145752622:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.83306884765625	2	511.821484	1021.62842	0.092977	4.7587E-05	3.5533	0.0018187	3.6463	0.0018662	512.3272754539908	17.177	0.091305	17.239	17.165	17.256	0.062601					5	3	2	0	0	0	0.37624	1	225	225		44.377	16.495	1	38864			1489	13414	1030	1031	1790	1790					0.11846612610952434
ALSLVLPRPG	10	Unmodified	_ALSLVLPRPG_					0	0	0		ENST00000534680.5_1_8:145751978-145752622:-|nuORF	ENST00000534680.5_1_8:145751978-145752622:-|nuORF	ENST00000534680.5_1_8:145751978-145752622:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	511.821484	1021.62842	-1.8578	-0.00095088	7.7054	0.0039438	5.8476	0.0029929	512.3263795517149	17.342	0.18118	17.342	17.228	17.409	0	0.051141	0.0041212	NaN	44.377	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19257			1490	13414	1030	1031							0.11846612610952434
ALSPLLLELL	10	Unmodified	_ALSPLLLELL_					0	0	0			REV__ENST00000599788.1_2_19:50414393-50432585:-|nuORF	REV__ENST00000599788.1_2_19:50414393-50432585:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	541.7332153320312	2	541.347	1080.67945	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.502	1	74.629	74.129	75.129	0.12711								0	0	0	0.45132	1	6889	6889		15.642	2.6826	1		+		1491	29257	1031	1032	1791	1791					0.1423351686512433
ALSPSLKNK	9	Unmodified	_ALSPSLKNK_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2901916503906	2	479.290017	956.565481	1.0247	0.00049114	-1.0115	-0.0004848	0.013214	6.3332E-06	479.2893864866619	25.144	0.57979	24.816	24.567	25.147	-0.32825					22	12	2	0	0	0	0.21969	1	1267	1267		71.877	17.101	1	197560			1492	2342	1032	1033	1792	1792					0.08546046822903008
ALSPVPSH	8	Unmodified	_ALSPVPSH_					0	0	0		ENST00000558969.1_1_17:62008689-62009627:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B;ENSG00000007312|ENST00000006750|CD79B;nc|ENSG00000007312|P40259-3|CD79B	ENST00000558969.1_1_17:62008689-62009627:-|nuORF	ENST00000558969.1_1_17:62008689-62009627:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2328796386719	2	404.221603	806.428653	2.8713	0.0011606	1.3524	0.00054667	4.2237	0.0017073	404.2222245660653	84.913	0.34726	84.972	84.806	85.153	0.05925					12	7	2	0	0	0	0.4196	1	8579	8579		8.2313	0	1	29671			1493	724	1033	1034	1793	1793					0.01769557663192245
ALSRHIRHCV	10	Unmodified	_ALSRHIRHCV_					0	0	0			REV__ENSG00000108591|ENST00000225729|DRG2	REV__ENSG00000108591|ENST00000225729|DRG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.3323974609375	2	596.330016	1190.64548	0.92115	0.00054931	3.8986	0.0023249	4.8197	0.0028742	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.85934	1	10010	10010		35.618	4.0885	1	1402200	+		1494	17724	1034	1035	1794	1794					0.0577820994508329
ALSRLQLQVTH	11	Unmodified	_ALSRLQLQVTH_					0	0	0			REV__ENST00000529001.5_1_11:118402516-118404307:+|nuORF	REV__ENST00000529001.5_1_11:118402516-118404307:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3703002929688	2	633.369861	1264.72517	-0.087569	-5.5464E-05	-0.98413	-0.00062332	-1.0717	-0.00067878	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.6921	1	9730	9730		32.812	3.6424	1	7059800	+		1495	20182	1035	1036	1795	1795					0.1033955510006308
ALSTGSVPVL	10	Unmodified	_ALSTGSVPVL_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.27655029296875	2	472.276575	942.538597	0.52277	0.00024689	-0.32885	-0.00015531	0.19392	9.1582E-05	472.2762486632179	37.09	1.1608	37.403	37.002	38.163	0.31312					63	28	4	0	0	0	0.43769	1	2939	2939		60.972	6.1956	1	1415200	+		1496	18541	1036	1037	1796	1796					0.06502938211713172
ALSTGSVPVL	10	Unmodified	_ALSTGSVPVL_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.276611328125	2	472.276575	942.538597	0.18837	8.8961E-05	0.021278	1.0049E-05	0.20964	9.901E-05	472.2764071960003	36.972	1.2427	37.458	37.078	38.321	0.48581					62	30	4	0	0	0	0.28443	1	2965	2965		73.975	2.679	1	1333500	+		1497	18541	1036	1037	1797	1797					0.06502938211713172
ALSTPVVEK	9	Unmodified	_ALSTPVVEK_					0	0	0		ENSG00000197265|ENST00000355904|GTF2E2	ENSG00000197265|ENST00000355904|GTF2E2	ENSG00000197265|ENST00000355904|GTF2E2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.276123046875	2	472.276575	942.538597	0.52277	0.00024689	-0.32885	-0.00015531	0.19392	9.1582E-05	472.2762486632179	37.09	1.1608	37.403	37.002	38.163	0.31312					63	28	4	0	0	0	0.15959	1	2960	2960		82.241	21.269	1	1415200			1498	8149	1037	1038	1798	1798					0.06502938211713172
ALSTVEKK	8	Unmodified	_ALSTVEKK_					0	0	0			REV__ENST00000508671.1_1_12:92875821-92875986:+|nuORF	REV__ENST00000508671.1_1_12:92875821-92875986:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26226806640625	2	438.263468	874.512382	0.15263	6.689E-05	-0.38156	-0.00016722	-0.22893	-0.00010033	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.7961	1	2102	2102		17.365	0.89182	1	11370000	+		1499	27930	1038	1039	1799	1799					0.07010669040232642
ALSTVTPRI	9	Unmodified	_ALSTVTPRI_					0	0	0		ENSG00000145375|ENST00000274008|SPATA5	ENSG00000145375|ENST00000274008|SPATA5	ENSG00000145375|ENST00000274008|SPATA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.289306640625	2	479.290017	956.565481	1.5188	0.00072796	-1.6014	-0.00076755	-0.082601	-3.959E-05	479.2891487430285	25.118	0.61746	24.687	24.408	25.026	-0.4311					22	13	2	0	0	0	0.25483	1	1274	1274		68.787	0	1	159010			1500	4767	1039	1040	1800	1800					0.0854604682289164
ALSVGKHFV	9	Unmodified	_ALSVGKHFV_					0	0	0		ENSG00000181396|ENST00000313056|OGFOD3;nc|ENSG00000181396|Q6PK18-2|OGFOD3	ENSG00000181396|ENST00000313056|OGFOD3	ENSG00000181396|ENST00000313056|OGFOD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2774353027344	2	479.279452	956.544351	-0.95082	-0.00045571	-3.0433	-0.0014586	-3.9941	-0.0019143	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.64555	1	10087	10087		44.377	3.8046	1	6350300			1501	7386	1040	1041	1801	1801					0.0643408151404401
ALSVHRSN	8	Unmodified	_ALSVHRSN_					0	0	0		chr1:32481069-32485101|47|14.87|0.41|5.17|+|0|ZBTB8B,ZBTB8B|1;ENSG00000273274|ENST00000609129|ZBTB8B;nc|ENSG00000273274|Q8NAP8-2|ZBTB8B	chr1:32481069-32485101|47|14.87|0.41|5.17|+|0|ZBTB8B,ZBTB8B|1	chr1:32481069-32485101|47|14.87|0.41|5.17|+|0|ZBTB8B,ZBTB8B|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2407531738281	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.89043	1	8161	8161		35.618	1.4457	1	1238700			1502	48	1041	1042	1802	1802					0.021228632977113193
ALSVHRSN	8	Unmodified	_ALSVHRSN_					0	0	0		chr1:32481069-32485101|47|14.87|0.41|5.17|+|0|ZBTB8B,ZBTB8B|1;ENSG00000273274|ENST00000609129|ZBTB8B;nc|ENSG00000273274|Q8NAP8-2|ZBTB8B	chr1:32481069-32485101|47|14.87|0.41|5.17|+|0|ZBTB8B,ZBTB8B|1	chr1:32481069-32485101|47|14.87|0.41|5.17|+|0|ZBTB8B,ZBTB8B|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24090576171875	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.89494	1	7998	7998		37.159	6.6555	1	1094000			1503	48	1041	1042	1803	1803					0.021228632977113193
ALSVLIKKSG	10	Unmodified	_ALSVLIKKSG_					0	0	0			REV__nc|ENSG00000166783|Q9Y4F3-3|MARF1	REV__nc|ENSG00000166783|Q9Y4F3-3|MARF1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.3265075683594	2	508.329142	1014.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.136	1	30.148	29.648	30.648	0.01123								0	0	0	0.45132	1	1312	1312		32.812	6.0163	1		+		1504	21317	1042	1043	1804	1804					0.13699479408148818
ALSVPLSLCV	10	Unmodified	_ALSVPLSLCV_					0	0	0		ENST00000546079.5_1_19:45496243-45496414:+|nuORF	ENST00000546079.5_1_19:45496243-45496414:+|nuORF	ENST00000546079.5_1_19:45496243-45496414:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.29010009765625	2	501.288628	1000.5627	-0.52378	-0.00026256	3.9973	0.0020038	3.4736	0.0017413	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.85934	1	8420	8420		35.618	5.1146	1	2929300			1505	13584	1043	1044	1805	1805					0.06244455373735036
ALSVPLSLCV	10	Unmodified	_ALSVPLSLCV_					0	0	0		ENST00000546079.5_1_19:45496243-45496414:+|nuORF	ENST00000546079.5_1_19:45496243-45496414:+|nuORF	ENST00000546079.5_1_19:45496243-45496414:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2904052734375	2	501.288628	1000.5627	-0.28392	-0.00014233	3.869	0.0019395	3.5851	0.0017972	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.77314	1	10342	10342		40.778	6.6056	1	9038000			1506	13584	1043	1044	1806	1806					0.06244455373735036
ALSVPLSLCV	10	Unmodified	_ALSVPLSLCV_					0	0	0		ENST00000546079.5_1_19:45496243-45496414:+|nuORF	ENST00000546079.5_1_19:45496243-45496414:+|nuORF	ENST00000546079.5_1_19:45496243-45496414:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2905578613281	2	501.288628	1000.5627	-0.45424	-0.0002277	3.9764	0.0019933	3.5222	0.0017656	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.74274	2	10399	10013;10399		42.396	5.7767	1	9727400			1507	13584	1043	1044	1807;1808	1808					0.06244455373735036
ALSVRRPD	8	Unmodified	_ALSVRRPD_					0	0	0			REV__nc|ENSG00000042832|P01266-2|TG	REV__nc|ENSG00000042832|P01266-2|TG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.263671875	2	457.264333	912.514114	0.21557	9.8573E-05	-0.19878	-9.0895E-05	0.016791	7.678E-06	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.8537	1	7922	7922		25.574	1.3713	1	1366100	+		1508	16331	1044	1045	1809	1809					0.05435722848858404
ALSVSSLLPG	10	Unmodified	_ALSVSSLLPG_					0	0	0		ENST00000463637.1_1_6:142723947-142725137:+|nuORF;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;ENSG00000112414|ENST00000367609|ADGRG6	ENST00000463637.1_1_6:142723947-142725137:+|nuORF	ENST00000463637.1_1_6:142723947-142725137:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2763671875	2	472.276575	942.538597	0.52277	0.00024689	-0.32885	-0.00015531	0.19392	9.1582E-05	472.2762486632179	37.09	1.1608	37.403	37.002	38.163	0.31312					63	28	4	0	0	0	0.4094	1	2950	2950		63.306	6.5852	1	1415200			1509	2663	1045	1046	1810	1810					0.0650293821172454
ALSVSSLLPG	10	Unmodified	_ALSVSSLLPG_					0	0	0		ENST00000463637.1_1_6:142723947-142725137:+|nuORF;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;ENSG00000112414|ENST00000367609|ADGRG6	ENST00000463637.1_1_6:142723947-142725137:+|nuORF	ENST00000463637.1_1_6:142723947-142725137:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2764587402344	2	472.276575	942.538597	0.18837	8.8961E-05	0.021278	1.0049E-05	0.20964	9.901E-05	472.2764071960003	36.972	1.2427	37.458	37.078	38.321	0.48581					62	30	4	0	0	0	0.4094	1	2954	2954		63.306	8.53	1	1333500			1510	2663	1045	1046	1811	1811					0.0650293821172454
ALSVWVLP	8	Unmodified	_ALSVWVLP_					0	0	0			REV__ENSG00000181656|ENST00000315033|GPR88	REV__ENSG00000181656|ENST00000315033|GPR88	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7450866699219	2	442.765646	883.516739	-1.2518	-0.00055427	2.525	0.001118	1.2732	0.00056372	442.7653555198602	89.481	0.21127	89.951	89.803	90.015	0.47068					6	4	2	0	0	0	0.4196	1	10595	10595		29.842	0	1	31663	+		1511	22472	1046	1047	1812	1812					0.07032178253814436
ALTCKLKP	8	Unmodified	_ALTCKLKP_					0	0	0		nc|ENSG00000134028|O15204-2|ADAMDEC1;ENSG00000134028|ENST00000256412|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2654113769531	2	437.264956	872.515359	-2.1366	-0.00093428	3.8525	0.0016846	1.7158	0.00075028	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.87479	1	675	675		30.504	1.3541	1	999210			1512	3907	1047	1048	1813	1813					0.07400220893396181
ALTCKLKP	8	Unmodified	_ALTCKLKP_					0	0	0		nc|ENSG00000134028|O15204-2|ADAMDEC1;ENSG00000134028|ENST00000256412|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26617431640625	2	437.264956	872.515359	-0.37471	-0.00016385	2.1781	0.00095241	1.8034	0.00078857	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.87922	1	815	815		31.955	5.1588	1	970200			1513	3907	1047	1048	1814	1814					0.07400220893396181
ALTCKLKP	8	Unmodified	_ALTCKLKP_					0	0	0		nc|ENSG00000134028|O15204-2|ADAMDEC1;ENSG00000134028|ENST00000256412|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26544189453125	2	437.264956	872.515359	1.7902	0.0007828	0.24809	0.00010848	2.0383	0.00089128	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.8347	1	712	712		23.042	0	1	738160			1514	3907	1047	1048	1815	1815					0.07400220893396181
ALTCKLKP	8	Unmodified	_ALTCKLKP_					0	0	0		nc|ENSG00000134028|O15204-2|ADAMDEC1;ENSG00000134028|ENST00000256412|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2654724121094	2	437.264956	872.515359	1.7524	0.00076626	-0.40991	-0.00017924	1.3425	0.00058702	437.264848658338	24.04	1.4327	23.526	22.938	24.371	-0.51365					98	32	5	0	0	0	0.84341	1	1171	1171		24.203	0	1	13559000			1515	3907	1047	1048	1816	1816					0.07400220893396181
ALTERVAKTG	10	Unmodified	_ALTERVAKTG_					0	0	0			REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.30322265625	2	523.303655	1044.59276	-0.041393	-2.1661E-05	-0.20594	-0.00010777	-0.24734	-0.00012943	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.8545	1	8865	8865		36.447	0.82846	1	3850300	+		1516	22616	1048	1049	1817	1817					0.07224530363282611
ALTGDLYG	8	Unmodified	_ALTGDLYG_					0	0	0			REV__ENST00000494720.5_1_2:219129258-219130297:-|nuORF	REV__ENST00000494720.5_1_2:219129258-219130297:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.20391845703125	2	405.205618	808.396684	-0.0495	-2.0058E-05	-2.1856	-0.00088563	-2.2351	-0.00090569	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.86288	1	7729	7729		26.796	0	1	162370	+		1517	18748	1049	1050	1818	1818					-0.0151785481062916
ALTGLKRALWL	11	Unmodified	_ALTGLKRALWL_					0	0	0		nc|ENSG00000175764|Q8NHH1-2|TTLL11	nc|ENSG00000175764|Q8NHH1-2|TTLL11	nc|ENSG00000175764|Q8NHH1-2|TTLL11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3924560546875	2	621.390065	1240.76558	2.9766	0.0018496	1.2761	0.00079293	4.2527	0.0026426	621.3907359645153	104.71	2.7313	104.66	104.1	106.83	-0.04039					247	64	5	0	0	0	0.6921	1	11505	11505		32.812	4.9302	1	12926000			1518	15110	1050	1051	1819	1819					0.15482521490503132
ALTGREVPIP	10	Unmodified	_ALTGREVPIP_					0	0	0		ENST00000284292.10_1_11:124616777-124616888:+|nuORF	ENST00000284292.10_1_11:124616777-124616888:+|nuORF	ENST00000284292.10_1_11:124616777-124616888:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.228759765625	2	526.808574	1051.60259	1.6634	0.00087629	-3.2264	-0.0016997	-1.563	-0.0008234	526.8070438212924	90.457	1.1035	90.908	90.57	91.673	0.45058					43	26	2	0	0	0	0.37624	1	10658	10658		31.53	20.019	1	303540			1519	9646	1051	1052	1820	1820					0.07885718368675043
ALTGRSLR	8	Unmodified	_ALTGRSLR_					0	0	0			REV__nc|ENSG00000177426|Q15583|TGIF1	REV__nc|ENSG00000177426|Q15583|TGIF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2652587890625	2	437.266876	872.519199	0.72217	0.00031578	-3.1375	-0.0013719	-2.4154	-0.0010562	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.85277	1	669	669		25.45	3.4903	1	944940	+		1520	30056	1052	1053	1821	1821					0.07784026711476599
ALTGRSLR	8	Unmodified	_ALTGRSLR_					0	0	0			REV__nc|ENSG00000177426|Q15583|TGIF1	REV__nc|ENSG00000177426|Q15583|TGIF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2657775878906	2	437.266876	872.519199	0.03062	1.3389E-05	-2.6363	-0.0011528	-2.6057	-0.0011394	437.2656144717129	22.266	1.1262	22.354	22.073	23.199	0.088013					130	57	3	0	0	0	0.80706	1	690	690		19.36	4.4951	1	2198600	+		1521	30056	1052	1053	1822	1822					0.07784026711476599
ALTHRKIEAKT	11	Unmodified	_ALTHRKIEAKT_					0	0	0		nc|ENSG00000174527|Q8N1T3-3|MYO1H;nc|ENSG00000174527|Q8N1T3|MYO1H;ENSG00000174527|ENST00000310903|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3772583007812	2	634.377686	1266.74082	-0.13799	-8.754E-05	-0.83355	-0.00052878	-0.97154	-0.00061633	634.3769981917211	117.62	0.35755	117.55	117.34	117.69	-0.07531					32	12	3	0	0	0	0.69248	1	12609	12609		32.751	10.171	1	1153300			1522	6943	1053	1054	1823	1823					0.11811841617122809
ALTHRKIEAKT	11	Unmodified	_ALTHRKIEAKT_					0	0	0		nc|ENSG00000174527|Q8N1T3-3|MYO1H;nc|ENSG00000174527|Q8N1T3|MYO1H;ENSG00000174527|ENST00000310903|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3761596679688	2	634.377686	1266.74082	1.3188	0.00083664	-1.7871	-0.0011337	-0.46828	-0.00029707	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.6493	2	12317	12317;12828		38.754	9.5835	1	12917000			1523	6943	1053	1054	1824;1825	1824					0.11811841617122809
ALTHRKIEAKT	11	Unmodified	_ALTHRKIEAKT_					0	0	0		nc|ENSG00000174527|Q8N1T3-3|MYO1H;nc|ENSG00000174527|Q8N1T3|MYO1H;ENSG00000174527|ENST00000310903|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.374755859375	2	634.377686	1266.74082	1.4899	0.00094515	-2.6111	-0.0016564	-1.1213	-0.0007113	634.3759288253121	109.92	1.3103	110.04	109.37	110.68	0.12289					100	52	2	0	0	0	0.60687	1	11855	11855		43.651	9.4782	1	14976000			1524	6943	1053	1054	1826	1826					0.11811841617122809
ALTHRKIEAKT	11	Unmodified	_ALTHRKIEAKT_					0	0	0		nc|ENSG00000174527|Q8N1T3-3|MYO1H;nc|ENSG00000174527|Q8N1T3|MYO1H;ENSG00000174527|ENST00000310903|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3733520507812	2	634.377686	1266.74082	1.4895	0.00094493	-2.7559	-0.0017483	-1.2664	-0.00080335	634.3758226680864	110.81	0.81062	110.93	110.67	111.48	0.11659					64	33	2	0	0	0	0.68532	1	11935	11935		33.922	0	1	300080			1525	6943	1053	1054	1827	1827					0.11811841617122809
ALTHRKIEAKT	11	Unmodified	_ALTHRKIEAKT_					0	0	0		nc|ENSG00000174527|Q8N1T3-3|MYO1H;nc|ENSG00000174527|Q8N1T3|MYO1H;ENSG00000174527|ENST00000310903|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3724365234375	2	634.377686	1266.74082	1.4914	0.00094611	-2.8382	-0.0018005	-1.3468	-0.00085438	634.3756552594748	112.2	0.31043	112.3	112.17	112.48	0.10638					42	11	4	0	0	0	0.68532	3	12086	12086;12094;12104		33.922	10.399	1	11155000			1526	6943	1053	1054	1828;1829;1830	1828					0.11811841617122809
ALTHRKIEAKT	11	Unmodified	_ALTHRKIEAKT_					0	0	0		nc|ENSG00000174527|Q8N1T3-3|MYO1H;nc|ENSG00000174527|Q8N1T3|MYO1H;ENSG00000174527|ENST00000310903|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3743896484375	2	634.377686	1266.74082	-1.1774	-0.00074689	0.2391	0.00015168	-0.93826	-0.00059521	634.3776925529805	109.87	1.6182	109.87	109.32	110.94	0.0060425					148	63	3	0	0	0	0.66929	1	11752	11752		36.447	3.6343	1	2778200			1527	6943	1053	1054	1831	1831					0.11811841617122809
ALTHRKIEAKT	11	Unmodified	_ALTHRKIEAKT_					0	0	0		nc|ENSG00000174527|Q8N1T3-3|MYO1H;nc|ENSG00000174527|Q8N1T3|MYO1H;ENSG00000174527|ENST00000310903|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3768310546875	2	634.377686	1266.74082	-1.1771	-0.0007467	3.3722	0.0021392	2.1951	0.0013925	635.385879469902	113.12	0.2589	113.09	112.96	113.22	-0.032333					22	7	4	0	0	0	0.57736	1	12068	12068		46.457	5.0302	1	5240800			1528	6943	1053	1054	1832	1832					0.11811841617122809
ALTHRKIEAKT	11	Unmodified	_ALTHRKIEAKT_					0	0	0		nc|ENSG00000174527|Q8N1T3-3|MYO1H;nc|ENSG00000174527|Q8N1T3|MYO1H;ENSG00000174527|ENST00000310903|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.87841796875	2	634.377686	1266.74082	2.1873	0.0013876	-2.6623	-0.0016889	-0.47502	-0.00030134	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.7144	1	13447	13447		29.17	4.6509	1	6886400			1529	6943	1053	1054	1833	1833					0.11811841617122809
ALTKEKSV	8	Unmodified	_ALTKEKSV_					0	0	0		ENSG00000143641|ENST00000366672|GALNT2	ENSG00000143641|ENST00000366672|GALNT2	ENSG00000143641|ENST00000366672|GALNT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2632751464844	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.84341	1	2859	2859		24.203	2.5004	1	22924000			1530	4654	1054	1055	1834	1834					0.07010669040232642
ALTLGSRR	8	Unmodified	_ALTLGSRR_					0	0	0		ENST00000396884.6_1_22:38368385-38368778:-|nuORF	ENST00000396884.6_1_22:38368385-38368778:-|nuORF	ENST00000396884.6_1_22:38368385-38368778:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2655334472656	2	437.266876	872.519199	-2.1366	-0.00093428	-0.53823	-0.00023535	-2.6749	-0.0011696	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.85277	1	700	700		25.45	0	1	999210			1531	11123	1055	1056	1835	1835					0.0778402671146523
ALTLGSRR	8	Unmodified	_ALTLGSRR_					0	0	0		ENST00000396884.6_1_22:38368385-38368778:-|nuORF	ENST00000396884.6_1_22:38368385-38368778:-|nuORF	ENST00000396884.6_1_22:38368385-38368778:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26531982421875	2	437.266876	872.519199	0.27465	0.0001201	-3.2994	-0.0014427	-3.0248	-0.0013226	437.2655143696572	24.107	1.3602	23.725	23.153	24.514	-0.38178					100	30	5	0	0	0	0.85277	1	1186	1186		25.45	0	1	12963000			1532	11123	1055	1056	1836	1836					0.0778402671146523
ALTLRGSR	8	Unmodified	_ALTLRGSR_					0	0	0			REV__nc|ENSG00000136099|O95206-2|PCDH8	REV__nc|ENSG00000136099|O95206-2|PCDH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26544189453125	2	437.266876	872.519199	-1.6247	-0.00071044	-1.1033	-0.00048243	-2.728	-0.0011929	437.26636390033156	24.021	1.8701	24.079	23.417	25.287	0.058165					191	86	4	0	0	0	0.86677	1	832	832		27.882	0	1	2248600	+		1533	19286	1056	1057	1837	1837					0.07784026711476599
ALTLRGSR	8	Unmodified	_ALTLRGSR_					0	0	0			REV__nc|ENSG00000136099|O95206-2|PCDH8	REV__nc|ENSG00000136099|O95206-2|PCDH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2654113769531	2	437.266876	872.519199	1.5079	0.00065936	-3.8592	-0.0016875	-2.3513	-0.0010282	437.26518584977657	27.503	2.0915	27.248	26.544	28.636	-0.25465					92	49	2	0	0	0	0.9283	1	1549	1549		49.442	8.6634	1	428760	+		1534	19286	1056	1057	1838	1838					0.07784026711476599
ALTLVDLIDM	10	Unmodified	_ALTLVDLIDM_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.3070678710938	2	552.304475	1102.5944	0.7768	0.00042903	2.8438	0.0015706	3.6206	0.0019997	552.3060097260034	92.551	2.2776	92.998	91.922	94.2	0.44661					137	53	3	0	0	0	0.8608	1	10946	10946		34.173	1.3601	1	579750	+		1535	17216	1057	1058	1839	1839					0.04720403337000789
ALTPTEVVI	9	Unmodified	_ALTPTEVVI_					0	0	0			REV__nc|ENSG00000158062|Q5T124-5|UBXN11	REV__nc|ENSG00000158062|Q5T124-5|UBXN11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.779052734375	2	471.778951	941.543348	-0.65012	-0.00030671	0.67197	0.00031702	0.021851	1.0309E-05	471.77898452212014	81.892	1.4081	82.392	81.953	83.361	0.49967					75	34	4	0	0	0	0.3636	1	9497	9497		60.294	4.7898	1	2439200	+		1536	20584	1058	1059	1840	1840					0.070238223544834
ALTPWFLPWL	10	Unmodified	_ALTPWFLPWL_					0	0	0		ENST00000373109.6_1_10:73822018-73822120:-|nuORF	ENST00000373109.6_1_10:73822018-73822120:-|nuORF	ENST00000373109.6_1_10:73822018-73822120:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	622.3471069335938	2	622.347335	1242.68012	-1.2166	-0.00075714	0.38471	0.00023943	-0.83187	-0.00051771	622.3475745875962	95.767	2.795	95.97	95.191	97.986	0.20242					140	65	3	0	0	0	0.85694	1	9796	9796		21.96	1.013	1	410920			1537	10731	1059	1060	1841	1841					0.06848356304840308
ALTRKNQLISF	11	Unmodified	_ALTRKNQLISF_					0	0	0		ENSG00000181544|ENST00000650831|FANCB	ENSG00000181544|ENST00000650831|FANCB	ENSG00000181544|ENST00000650831|FANCB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	645.8841552734375	2	645.880062	1289.74557	2.6479	0.0017102	2.8586	0.0018463	5.5065	0.0035565	645.8818448298974	105.88	1.6011	105.84	105.23	106.83	-0.03714					97	37	3	0	0	0	0.75121	1	11676	11676		18.262	6.0554	1	1766900			1538	7392	1060	1061	1842	1842					0.11228725759883673
ALTRLKHL	8	Unmodified	_ALTRLKHL_					0	0	0		ENSG00000174373|ENST00000680220|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1	ENSG00000174373|ENST00000680220|RALGAPA1	ENSG00000174373|ENST00000680220|RALGAPA1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.5321350097656	2	476.308544	950.602535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.645	1	78.645	78.145	79.145	0								0	0	0	0.2939	1	7202	7202		27.882	11.177	1				1539	6929	1061	1062	1843	1843					0.12525763159305825
ALTRNVPVRDI	11	Unmodified	_ALTRNVPVRDI_					0	0	0		ENST00000574501.1_1_17:1964788-1964956:-|nuORF;ENST00000573153.5_1_17:1964788-1969297:-|nuORF;nc|ENSG00000070366|Q86US8-2|SMG6;ENST00000573166.5_1_17:1964788-1990458:-|nuORF;nc|ENSG00000070366|Q86US8-3|SMG6;ENSG00000070366|ENST00000263073|SMG6	ENST00000574501.1_1_17:1964788-1964956:-|nuORF	ENST00000574501.1_1_17:1964788-1964956:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3676147460938	2	627.369861	1252.72517	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.28	1	119.19	118.69	119.69	-0.088509								0	0	0	0.56276	1	12878	12878		27.047	4.4677	1				1540	1237	1062	1063	1844	1844					0.10891555100079131
ALTSEIALL	9	Unmodified	_ALTSEIALL_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774658203125	2	465.778951	929.543348	0.52254	0.00024339	-3.5179	-0.0016386	-2.9953	-0.0013952	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.76996	1	8179	8179		33.516	3.0119	1	1330400			1541	5880	1063	1064	1845	1845					0.07575822354453976
ALTVAKRSH	9	Unmodified	_ALTVAKRSH_					0	0	0		ENST00000532828.6_1_19:37677585-37677789:-|nuORF	ENST00000532828.6_1_19:37677585-37677789:-|nuORF	ENST00000532828.6_1_19:37677585-37677789:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.796142578125	2	491.793258	981.571963	0.72275	0.00035544	4.2539	0.002092	4.9766	0.0024475	491.79524952616435	50.532	2.1367	51.283	50.465	52.601	0.75174					133	51	3	0	0	0	0.76255	1	5006	5006		35.618	2.1027	1	1359500			1542	13386	1064	1065	1846	1846					0.08043984774269575
ALTVTVVIP	9	Unmodified	_ALTVTVVIP_					0	0	0			REV__nc|ENSG00000017260|P98194-2|ATP2C1	REV__nc|ENSG00000017260|P98194-2|ATP2C1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79241943359375	2	456.791861	911.569169	-0.5708	-0.00026074	3.3989	0.0015526	2.8281	0.0012919	456.79332762585267	37.831	1.4155	38.144	37.663	39.079	0.31312					135	35	5	0	0	0	0.78058	1	3088	3088		30.504	3.7075	1	9282000	+		1543	16219	1065	1066	1847	1847					0.10984716596738053
ALTVVPSII	9	Unmodified	_ALTVVPSII_					0	0	0			REV__nc|ENSG00000290724|O14609|XKRY	REV__nc|ENSG00000290724|O14609|XKRY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79254150390625	2	456.791861	911.569169	-0.85953	-0.00039263	3.5719	0.0016316	2.7123	0.001239	456.7934335420697	36.323	3.5767	36.267	33.824	37.401	-0.055901					213	80	5	0	0	0	0.67235	1	2368	2368		42.474	8.9589	1	4833100	+		1544	30297	1066	1067	1848	1848					0.10984716596760791
ALVAAAIGLL	10	Unmodified	_ALVAAAIGLL_					0	0	0			REV__ENSG00000188051|ENST00000341130|TMEM221	REV__ENSG00000188051|ENST00000341130|TMEM221	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3011474609375	2	456.299853	910.585153	-1.8518	-0.00084499	3.0889	0.0014095	1.237	0.00056446	456.30111396702245	40.968	1.2974	40.968	40.595	41.892	0					95	40	3	0	0	0	0.85976	1	2710	2710		35.201	7.3185	1	438450	+		1545	22974	1067	1068	1849	1849					0.1262842283365444
ALVAAAIGLL	10	Unmodified	_ALVAAAIGLL_					0	0	0			REV__ENSG00000188051|ENST00000341130|TMEM221	REV__ENSG00000188051|ENST00000341130|TMEM221	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30072021484375	2	456.299853	910.585153	-1.6896	-0.00077098	4.4336	0.0020231	2.744	0.0012521	456.30174360814857	51.937	1.2506	51.937	51.624	52.874	0					54	32	2	0	0	0	0.85976	1	4235	4235		35.201	6.0512	1	89537	+		1546	22974	1067	1068	1850	1850					0.1262842283365444
ALVAAAIGLL	10	Unmodified	_ALVAAAIGLL_					0	0	0			REV__ENSG00000188051|ENST00000341130|TMEM221	REV__ENSG00000188051|ENST00000341130|TMEM221	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3012390136719	2	456.299853	910.585153	-0.11111	-5.0701E-05	2.9884	0.0013636	2.8773	0.0013129	456.3010566410468	35.268	1.48	35.256	34.768	36.248	-0.012203					106	34	4	0	0	0	0.85976	1	2165	2165		35.201	8.4046	1	794600	+		1547	22974	1067	1068	1851	1851					0.1262842283365444
ALVAAAIGLL	10	Unmodified	_ALVAAAIGLL_					0	0	0			REV__ENSG00000188051|ENST00000341130|TMEM221	REV__ENSG00000188051|ENST00000341130|TMEM221	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3010559082031	2	456.299853	910.585153	-0.75416	-0.00034412	3.5877	0.0016371	2.8336	0.001293	456.3012900851617	35.065	1.7041	35.071	34.727	36.431	0.0063934					112	39	4	0	0	0	0.85976	1	2183	2183		35.201	1.6851	1	634200	+		1548	22974	1067	1068	1852	1852					0.1262842283365444
ALVAAAIGLL	10	Unmodified	_ALVAAAIGLL_					0	0	0			REV__ENSG00000188051|ENST00000341130|TMEM221	REV__ENSG00000188051|ENST00000341130|TMEM221	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3000793457031	2	456.299853	910.585153	0.11124	5.0758E-05	2.4046	0.0010972	2.5159	0.001148	456.3008660757633	48.327	3.035	48.325	47.755	50.79	-0.002449					136	76	2	0	0	0	0.86786	1	4003	4003		26.796	3.7536	1	254750	+		1549	22974	1067	1068	1853	1853					0.1262842283365444
ALVAAAIGLL	10	Unmodified	_ALVAAAIGLL_					0	0	0			REV__ENSG00000188051|ENST00000341130|TMEM221	REV__ENSG00000188051|ENST00000341130|TMEM221	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3012390136719	2	456.299853	910.585153	-1.267	-0.00057813	4.2907	0.0019578	3.0237	0.0013797	456.3016565043114	33.346	1.5471	33.392	33.095	34.642	0.045853					160	67	4	0	0	0	0.85108	1	1619	1619		19.36	1.0356	1	1558600	+		1550	22974	1067	1068	1854	1854					0.1262842283365444
ALVAAAIGLL	10	Unmodified	_ALVAAAIGLL_					0	0	0			REV__ENSG00000188051|ENST00000341130|TMEM221	REV__ENSG00000188051|ENST00000341130|TMEM221	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30126953125	2	456.299853	910.585153	-1.2643	-0.00057689	4.2328	0.0019314	2.9685	0.0013545	456.30161744594176	35.005	1.68	35.044	34.605	36.285	0.038643					125	54	3	0	0	0	0.70264	1	1799	1799		44.531	9.3304	1	565550	+		1551	22974	1067	1068	1855	1855					0.1262842283365444
ALVAAAIGLL	10	Unmodified	_ALVAAAIGLL_					0	0	0			REV__ENSG00000188051|ENST00000341130|TMEM221	REV__ENSG00000188051|ENST00000341130|TMEM221	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3011169433594	2	456.299853	910.585153	0.12298	5.6116E-05	2.7993	0.0012773	2.9223	0.0013334	456.30098509136985	34.994	1.698	34.939	34.615	36.313	-0.055149					136	59	3	0	0	0	0.70264	2	1795	1780;1795		44.531	9.7505	1	657240	+		1552	22974	1067	1068	1856;1857	1857					0.1262842283365444
ALVAAAIGLL	10	Unmodified	_ALVAAAIGLL_					0	0	0			REV__ENSG00000188051|ENST00000341130|TMEM221	REV__ENSG00000188051|ENST00000341130|TMEM221	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3011169433594	2	456.299853	910.585153	-0.032958	-1.5039E-05	2.9428	0.0013428	2.9098	0.0013278	456.3010618832383	34.27	2.0114	34.48	34.107	36.119	0.21003					105	50	4	0	0	0	0.85976	1	2547	2547		35.201	1.6851	1	1566600	+		1553	22974	1067	1068	1858	1858					0.1262842283365444
ALVAEKEKRRI	11	Unmodified	_ALVAEKEKRRI_					0	0	0			REV__nc|ENSG00000143622|Q92963-2|RIT1	REV__nc|ENSG00000143622|Q92963-2|RIT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2729187011719	3	438.273499	1311.79867	-1.813	-0.00079457	0.59005	0.0002586	-1.2229	-0.00053597	438.2736679941031	107.15	1.2018	107.19	106.63	107.83	0.036118					118	28	5	0	0	0	0.71207	1	11471	11471		29.551	2.801	1	2816400	+		1554	19827	1068	1069	1859	1859					0.15524103542543344
ALVALVLNV	9	Unmodified	_ALVALVLNV_					0	0	0		nc|ENSG00000172046|O94966|USP19;nc|ENSG00000172046|O94966-5|USP19	nc|ENSG00000172046|O94966|USP19	nc|ENSG00000172046|O94966|USP19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3009338378906	2	456.299853	910.585153	-1.7927	-0.00081802	3.97	0.0018115	2.1773	0.00099349	456.30151188064457	45.052	1.9056	45.052	44.154	46.06	0					117	46	3	0	0	0	0.69914	1	3290	3290		40.573	3.4135	1	498210			1555	15095	1069	1070	1860	1860					0.1262842283365444
ALVARLLPFLP	11	Unmodified	_ALVARLLPFLP_					0	0	0		ENSG00000229474|ENST00000682850|PATL2	ENSG00000229474|ENST00000682850|PATL2	ENSG00000229474|ENST00000682850|PATL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9306335449219	3	403.928781	1208.76451	2.3249	0.0009391	-0.14576	-5.8878E-05	2.1792	0.00088023	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.732	1	3937	3937		26.063	1.8316	1	2948200			1556	8726	1070	1071	1861	1861					0.16848307121586004
ALVARPRRGP	10	Unmodified	_ALVARPRRGP_					0	0	0		ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.8405151367188	2	546.841074	1091.66759	0.19665	0.00010754	-2.8678	-0.0015682	-2.6712	-0.0014607	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.71042	1	10656	10656		44.117	1.6423	1	55511000			1557	7970	1071	1072	1862	1862					0.12542757685173456
ALVASIQPLKL	11	Unmodified	_ALVASIQPLKL_					0	0	0			REV__nc|ENSG00000162976|Q8N755-2|SLC66A3	REV__nc|ENSG00000162976|Q8N755-2|SLC66A3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.873291015625	2	576.871174	1151.72779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.624	1	42.629	42.129	43.129	0.0057487								0	0	0	0.56276	1	2879	2879		26.063	2.5407	1		+		1558	20868	1072	1073	1863	1863					0.15800010505040518
ALVAVVGPV	9	Unmodified	_ALVAVVGPV_					0	0	0		ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;ENSG00000108846|ENST00000285238|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	ENST00000502426.5_1_17:48736553-48755440:+|nuORF	ENST00000502426.5_1_17:48736553-48755440:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2669372558594	2	412.765646	823.516739	-0.024773	-1.0226E-05	2.7576	0.0011383	2.7329	0.001128	412.7671753724154	37.892	4.8812	37.868	35.596	40.477	-0.023979					267	113	4	0	0	0	0.78292	1	2714	2714		29.842	0	1	1546000			1559	2436	1073	1074	1864	1864					0.09792178253815109
ALVDEIPL	8	Unmodified	_ALVDEIPL_					0	0	0			REV__nc|ENSG00000179456|Q99592|ZBTB18	REV__nc|ENSG00000179456|Q99592|ZBTB18	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25323486328125	2	435.252569	868.490584	-1.2943	-0.00056337	-1.5363	-0.00066866	-2.8306	-0.001232	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.86288	1	7910	7910		26.796	0.10319	1	1788100	+		1560	22338	1074	1075	1865	1865					0.05107864291676378
ALVDEIPL	8	Unmodified	_ALVDEIPL_					0	0	0			REV__nc|ENSG00000179456|Q99592|ZBTB18	REV__nc|ENSG00000179456|Q99592|ZBTB18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2528991699219	2	435.252569	868.490584	-0.16595	-7.2231E-05	-2.6833	-0.0011679	-2.8492	-0.0012401	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.884	1	8312	8312		33.516	5.2613	1	2823900	+		1561	22338	1074	1075	1866	1866					0.05107864291676378
ALVDEIPL	8	Unmodified	_ALVDEIPL_					0	0	0			REV__nc|ENSG00000179456|Q99592|ZBTB18	REV__nc|ENSG00000179456|Q99592|ZBTB18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.251953125	2	435.252569	868.490584	-1.5314	-0.00066653	-1.3352	-0.00058116	-2.8666	-0.0012477	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.86288	1	7814	7814		26.796	2.5934	1	2494100	+		1562	22338	1074	1075	1867	1867					0.05107864291676378
ALVEILIDP	9	Unmodified	_ALVEILIDP_					0	0	0		ENSG00000138031|ENST00000679454|ADCY3;nc|ENSG00000138031|O60266-2|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.796875	2	491.794601	981.574648	-2.4952	-0.0012271	4.297	0.0021132	1.8018	0.00088611	491.79691795705514	63.228	1.9612	63.256	62.751	64.712	0.02813					100	71	2	0	0	0	0.72402	1	5994	5994		38.806	3.6054	1	93294			1563	4257	1075	1076	1868	1868					0.08312395388577443
ALVEILIPD	9	Unmodified	_ALVEILIPD_					0	0	0		ENSG00000080298|ENST00000617270|RFX3;nc|ENSG00000080298|P48380-2|RFX3;nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	ENSG00000080298|ENST00000617270|RFX3;nc|ENSG00000087903|P48378-2|RFX2	ENSG00000080298|ENST00000617270|RFX3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7961730957031	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.181	1	62.148	61.648	62.648	-0.033173								0	0	0	0.32159	1	5888	5888		23.042	1.0826	1				1564	1438;1581	1076	1077	1869	1869					0.08312395388577443
ALVEILIPD	9	Unmodified	_ALVEILIPD_					0	0	0		ENSG00000080298|ENST00000617270|RFX3;nc|ENSG00000080298|P48380-2|RFX3;nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	ENSG00000080298|ENST00000617270|RFX3;nc|ENSG00000087903|P48378-2|RFX2	ENSG00000080298|ENST00000617270|RFX3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79705810546875	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.045	1	62.06	61.56	62.56	0.015724								0	0	0	0.30613	1	5405	5405		42.396	6.7778	1				1565	1438;1581	1076	1077	1870	1870					0.08312395388577443
ALVGGVLLIG	10	Unmodified	_ALVGGVLLIG_					0	0	0		ENSG00000069696|ENST00000176183|DRD4	ENSG00000069696|ENST00000176183|DRD4	ENSG00000069696|ENST00000176183|DRD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30126953125	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.86786	1	2026	2026		26.796	0	1	1057300			1566	1223	1077	1078	1871	1871					0.1262842283366581
ALVGKRLI	8	Unmodified	_ALVGKRLI_					0	0	0			REV__ENSG00000148803|ENST00000278025|FUOM	REV__ENSG00000148803|ENST00000278025|FUOM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3001403808594	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.81548	1	6359	6359		20.482	1.1219	1	1072400	+		1567	20138	1078	1079	1872	1872					0.14627262273359065
ALVGKRLI	8	Unmodified	_ALVGKRLI_					0	0	0			REV__ENSG00000148803|ENST00000278025|FUOM	REV__ENSG00000148803|ENST00000278025|FUOM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3001708984375	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.83466	1	6953	6953		23.037	1.3344	1	1702600	+		1568	20138	1078	1079	1873	1873					0.14627262273359065
ALVGKRLI	8	Unmodified	_ALVGKRLI_					0	0	0			REV__ENSG00000148803|ENST00000278025|FUOM	REV__ENSG00000148803|ENST00000278025|FUOM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.29998779296875	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.80963	1	6472	6472		15.636	0.97212	1	1852500	+		1569	20138	1078	1079	1874	1874					0.14627262273359065
ALVGKRLI	8	Unmodified	_ALVGKRLI_					0	0	0			REV__ENSG00000148803|ENST00000278025|FUOM	REV__ENSG00000148803|ENST00000278025|FUOM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3013916015625	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.82464	1	7702	7702		21.702	7.0382	1	6323600	+		1570	20138	1078	1079	1875	1875					0.14627262273359065
ALVGTQGRH	9	Unmodified	_ALVGTQGRH_					0	0	0		nc|ENSG00000204580|Q08345-4|DDR1;ENST00000431373.1_1_6:30853540-30859007:+|nuORF;nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1	nc|ENSG00000204580|Q08345-4|DDR1	nc|ENSG00000204580|Q08345-4|DDR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.7590026855469	2	469.761958	937.509363	-0.023436	-1.1009E-05	-3.1496	-0.0014796	-3.173	-0.0014906	469.76032512029695	40.348	1.0077	40.3	40.046	41.054	-0.04789					61	38	2	0	0	0	0.78983	1	2542	2542		27.882	1.0861	1	392540			1571	8462	1079	1080	1876	1876					0.038108387060901805
ALVHLFVGR	9	Unmodified	_ALVHLFVGR_					0	0	0			REV__nc|ENSG00000145740|Q8TAD4-2|SLC30A5	REV__nc|ENSG00000145740|Q8TAD4-2|SLC30A5	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3091125488281	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.581	1	60.682	60.182	61.182	0.10082								0	0	0	0.30053	1	5247	5247		30.504	2.2494	1		+		1572	19965	1080	1081	1877	1877					0.09765763159327889
ALVIGGLVLG	10	Unmodified	_ALVIGGLVLG_					0	0	0			REV__ENSG00000135740|ENST00000299798|SLC9A5	REV__ENSG00000135740|ENST00000299798|SLC9A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30078125	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.85108	1	1909	1909		19.36	0	1	1057300	+		1573	19243	1081	1082	1878	1878					0.1262842283366581
ALVIIGADE	9	Unmodified	_ALVIIGADE_					0	0	0			REV__nc|ENSG00000140798|Q96J65|ABCC12	REV__nc|ENSG00000140798|Q96J65|ABCC12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7527160644531	2	450.755475	899.496398	0.5597	0.00025229	-3.4679	-0.0015632	-2.9082	-0.0013109	450.7538239580323	79.562	2.1146	79.701	78.151	80.265	0.13883					102	73	2	0	0	0	0.77546	1	7433	7433		31.955	1.4512	1	128600	+		1574	19641	1082	1083	1879	1879					0.042629628033296285
ALVIPPQPPTT	11	Unmodified	_ALVIPPQPPTT_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.328125	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.69995	1	11242	11242		31.53	2.3598	1	6007000			1575	3009	1083	1084	1880	1880					0.08819158199935373
ALVITGKPL	9	Unmodified	_ALVITGKPL_					0	0	0			REV__nc|ENSG00000106853|Q14914-2|PTGR1	REV__nc|ENSG00000106853|Q14914-2|PTGR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3009948730469	2	456.299853	910.585153	-0.39388	-0.00017973	3.0173	0.0013768	2.6234	0.001197	456.3011476839791	49.644	1.4417	49.55	48.811	50.252	-0.093182					60	34	2	0	0	0	0.76255	1	3833	3833		35.618	0.41757	1	144660	+		1576	17634	1084	1085	1881	1881					0.1262842283365444
ALVITSIPI	9	Unmodified	_ALVITSIPI_					0	0	0		nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10;nc|ENSG00000154263|Q8WWZ4-5|ABCA10;nc|ENSG00000154263|Q8WWZ4-4|ABCA10	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8002624511719	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3168	3168		17.365	0.89182	1	890090			1577	5269	1085	1086	1882	1882					0.11905003113804469
ALVITSIPI	9	Unmodified	_ALVITSIPI_					0	0	0		nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10;nc|ENSG00000154263|Q8WWZ4-5|ABCA10;nc|ENSG00000154263|Q8WWZ4-4|ABCA10	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8004150390625	2	463.799686	925.584819	-1.356	-0.00062891	2.7368	0.0012693	1.3808	0.00064042	463.8008126700971	41.516	1.4901	41.52	41.125	42.615	0.003418					87	36	3	0	0	0	0.77546	1	3128	3128		31.955	1.4512	1	533600			1578	5269	1085	1086	1883	1883					0.11905003113804469
ALVITSIPI	9	Unmodified	_ALVITSIPI_					0	0	0		nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10;nc|ENSG00000154263|Q8WWZ4-5|ABCA10;nc|ENSG00000154263|Q8WWZ4-4|ABCA10	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.7994689941406	2	463.799686	925.584819	0.23374	0.00010841	1.7317	0.00080317	1.9655	0.00091158	463.8003055874184	41.421	1.4891	41.495	41.009	42.498	0.073418					84	40	3	0	0	0	0.7932	1	2668	2668		25.45	1.2474	1	378670			1579	5269	1085	1086	1884	1884					0.11905003113804469
ALVITSIPI	9	Unmodified	_ALVITSIPI_					0	0	0		nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10;nc|ENSG00000154263|Q8WWZ4-5|ABCA10;nc|ENSG00000154263|Q8WWZ4-4|ABCA10	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.79986572265625	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	3039	3039		12.959	0.75233	1	1231300			1580	5269	1085	1086	1885	1885					0.11905003113804469
ALVITSIPI	9	Unmodified	_ALVITSIPI_					0	0	0		nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10;nc|ENSG00000154263|Q8WWZ4-5|ABCA10;nc|ENSG00000154263|Q8WWZ4-4|ABCA10	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.7998046875	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.7932	1	3039	3039		17.365	0.89182	1	1091400			1581	5269	1085	1086	1886	1886					0.11905003113804469
ALVKRVTWNL	10	Unmodified	_ALVKRVTWNL_					0	0	0		nc|ENSG00000070047|Q9P1Y6-2|PHRF1;ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1	nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1	nc|ENSG00000070047|Q9P1Y6-3|PHRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5805358886719	3	400.580152	1198.71863	3.4037	0.0013634	-2.3356	-0.00093561	1.068	0.00042784	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.86207	1	13651	13651		24.232	6.3987	1	5321000			1582	14772;14773	1086	1087	1887	1887					0.12721661939372098
ALVKVKIQPPF	11	Unmodified	_ALVKVKIQPPF_					0	0	0		ENST00000592946.1_1_19:44611552-44611663:-|nuORF	ENST00000592946.1_1_19:44611552-44611663:-|nuORF	ENST00000592946.1_1_19:44611552-44611663:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.93243408203125	3	413.932303	1238.77508	-1.8077	-0.00074828	2.8525	0.0011808	1.0448	0.00043248	413.9334753019912	44.718	2.8382	44.718	44.154	46.992	0					147	70	3	0	0	0	0.74022	1	3223	3223		24.232	2.4514	1	588320			1583	14300	1087	1088	1888	1888					0.16524289776043588
ALVKVKIQPPF	11	Unmodified	_ALVKVKIQPPF_					0	0	0		ENST00000592946.1_1_19:44611552-44611663:-|nuORF	ENST00000592946.1_1_19:44611552-44611663:-|nuORF	ENST00000592946.1_1_19:44611552-44611663:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.9329528808594	3	413.932303	1238.77508	-1.1382	-0.00047114	1.8741	0.00077574	0.73585	0.00030459	413.9330056480743	43.336	2.2043	43.3	41.98	44.184	-0.03582					131	52	3	0	0	0	0.76251	1	3358	3358		19.263	0	1	471060			1584	14300	1087	1088	1889	1889					0.16524289776043588
ALVKVKIQPPF	11	Unmodified	_ALVKVKIQPPF_					0	0	0		ENST00000592946.1_1_19:44611552-44611663:-|nuORF	ENST00000592946.1_1_19:44611552-44611663:-|nuORF	ENST00000592946.1_1_19:44611552-44611663:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9324951171875	3	413.932303	1238.77508	1.9789	0.00081913	-0.83989	-0.00034766	1.139	0.00047147	413.9318701140447	44.846	2.3922	44.842	44.201	46.593	-0.0041618					170	56	4	0	0	0	0.75906	1	3668	3668		20.03	6.5225	1	713740			1585	14300	1087	1088	1890	1890					0.16524289776043588
ALVLAEAPE	9	Unmodified	_ALVLAEAPE_					0	0	0			REV__ENST00000561933.1_1_16:68344571-68344829:-|nuORF	REV__ENST00000561933.1_1_16:68344571-68344829:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3000793457031	2	456.755475	911.496398	0.10396	4.7486E-05	3.916	0.0017887	4.02	0.0018362	456.75656626416827	48.19	0.21502	48.187	48.058	48.273	-0.0024452					6	4	2	0	0	0	0.20789	1	4003	4003		38.806	6.8513	1	25103	+		1586	17384	1088	1089	1891	1891					0.03710962803336315
ALVLGGVDVT	10	Unmodified	_ALVLGGVDVT_					0	0	0		ENSG00000136930|ENST00000259457|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2874755859375	2	472.276575	942.538597	-1.7052	-0.00080533	-3.4444	-0.0016267	-5.1497	-0.0024321	472.27478288440483	94.877	0.24812	95.08	94.862	95.11	0.20242					8	5	2	0	0	0	0.37624	1	9656	9656		16.473	0.83134	1	104220			1587	4158	1089	1090	1892	1892					0.06502938211713172
ALVLLADLV	9	Unmodified	_ALVLLADLV_					0	0	0			REV__nc|ENSG00000122986|Q96D96-2|HVCN1	REV__nc|ENSG00000122986|Q96D96-2|HVCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8001708984375	2	463.799686	925.584819	-0.080206	-3.7199E-05	1.9522	0.00090541	1.8719	0.00086821	463.80040731335265	41.41	1.3196	41.365	40.954	42.273	-0.045467					80	38	3	0	0	0	0.7932	1	2729	2729		17.365	0.89182	1	417210	+		1588	18523	1090	1091	1893	1893					0.119050031137931
ALVLLDLLG	9	Unmodified	_ALVLLDLLG_					0	0	0		ENST00000372748.7_1_1:40776930-40778265:-|nuORF	ENST00000372748.7_1_1:40776930-40778265:-|nuORF	ENST00000372748.7_1_1:40776930-40778265:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7986145019531	2	463.799686	925.584819	-2.5644	-0.0011894	3.5074	0.0016267	0.94293	0.00043733	463.80118382898894	40.741	0.9326	41.133	40.832	41.765	0.39209					70	26	3	0	0	0	0.77546	1	3515	3515		31.955	1.4512	1	5806600			1589	10717	1091	1092	1894	1894					0.11905003113815837
ALVLLDLLG	9	Unmodified	_ALVLLDLLG_					0	0	0		ENST00000372748.7_1_1:40776930-40778265:-|nuORF	ENST00000372748.7_1_1:40776930-40778265:-|nuORF	ENST00000372748.7_1_1:40776930-40778265:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.79974365234375	2	463.799686	925.584819	-1.7032	-0.00078997	2.9558	0.0013709	1.2525	0.00058091	463.8008996094523	40.729	0.89679	41.318	40.908	41.805	0.58916					67	25	3	0	0	0	0.7932	1	3485	3485		18.324	0.95945	1	5530000			1590	10717	1091	1092	1895	1895					0.11905003113815837
ALVLLKRG	8	Unmodified	_ALVLLKRG_					0	0	0		nc|ENSG00000171174|Q9H477-2|RBKS;ENSG00000171174|ENST00000302188|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3001403808594	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.86906	1	6571	6571		8.2313	0.54101	1	1072400			1591	6641	1092	1093	1896	1896					0.14627262273370434
ALVLLKRG	8	Unmodified	_ALVLLKRG_					0	0	0		nc|ENSG00000171174|Q9H477-2|RBKS;ENSG00000171174|ENST00000302188|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.30023193359375	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.82464	2	7012	7012;7036		21.702	6.0661	1	1702600			1592	6641	1092	1093	1897;1898	1897					0.14627262273370434
ALVLLKRG	8	Unmodified	_ALVLLKRG_					0	0	0		nc|ENSG00000171174|Q9H477-2|RBKS;ENSG00000171174|ENST00000302188|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.30010986328125	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.81724	1	7333	7333		14.664	0.88877	1	881780			1593	6641	1092	1093	1899	1899					0.14627262273370434
ALVLLKRG	8	Unmodified	_ALVLLKRG_					0	0	0		nc|ENSG00000171174|Q9H477-2|RBKS;ENSG00000171174|ENST00000302188|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30023193359375	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81724	1	6920	6920		14.664	5.1935	1	1921500			1594	6641	1092	1093	1900	1900					0.14627262273370434
ALVLLKRG	8	Unmodified	_ALVLLKRG_					0	0	0		nc|ENSG00000171174|Q9H477-2|RBKS;ENSG00000171174|ENST00000302188|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.300048828125	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.86791	1	6893	6893		28.254	5.2176	1	1852500			1595	6641	1092	1093	1901	1901					0.14627262273370434
ALVLLKRG	8	Unmodified	_ALVLLKRG_					0	0	0		nc|ENSG00000171174|Q9H477-2|RBKS;ENSG00000171174|ENST00000302188|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2997131347656	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.85277	2	8508	8508;8655		28.254	7.7724	1	5485100			1596	6641	1092	1093	1902;1903	1902					0.14627262273370434
ALVLLKRG	8	Unmodified	_ALVLLKRG_					0	0	0		nc|ENSG00000171174|Q9H477-2|RBKS;ENSG00000171174|ENST00000302188|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2998352050781	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.86288	1	7710	7710		26.796	6.3143	1	6323600			1597	6641	1092	1093	1904	1904					0.14627262273370434
ALVLPGCHPF	10	Unmodified	_ALVLPGCHPF_					0	0	0			REV__ENST00000497918.5_1_2:220033318-220033813:-|nuORF	REV__ENST00000497918.5_1_2:220033318-220033813:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3611450195312	2	527.281137	1052.54772	1.0501	0.00055371	0.87465	0.00046119	1.9248	0.0010149	527.2816163225509	32.742	1.1013	32.954	32.55	33.651	0.21168					59	25	4	0	0	0	0.37624	1	2276	2276		44.531	23.694	1	2180500	+		1598	23634	1093	1094	1905	1905					0.023550082963765817
ALVLPSILVM	10	Oxidation (M)	_ALVLPSILVM(Oxidation (M))_		ALVLPSILVM(1)		ALVLPSILVM(46)	0	0	1			REV__nc|ENSG00000074416|Q99685-2|MGLL	REV__nc|ENSG00000074416|Q99685-2|MGLL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.3289794921875	2	536.327753	1070.64095	0.096434	5.172E-05	3.0688	0.0016459	3.1652	0.0016976	536.3291981076486	31.673	0.59839	31.781	31.548	32.146	0.10707					29	13	3	0	0	0	0.67608	1	2170	2170		45.952	13.201	1	417060	+		1599	16690	1094	1095	1906	1906		240			0.10845887958976164
ALVLPSRGPLD	11	Unmodified	_ALVLPSRGPLD_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8529052734375	2	569.334956	1136.65536	0.5271	0.0003001	3.6214	0.0020618	4.1485	0.0023619	569.3362762951762	101.94	0.27916	102.13	101.97	102.25	0.19484					8	6	2	0	0	0	0.17478	1	10716	10716		32.812	10.853	1	303860			1600	4078	1095	1096	1907	1907					0.09249676431477383
ALVLPTINS	9	Unmodified	_ALVLPTINS_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2795715332031	2	464.279118	926.543683	0.32303	0.00014997	0.058601	2.7207E-05	0.38163	0.00017718	464.2791736750263	51.466	0.7576	51.526	51.064	51.822	0.059719					32	20	2	0	0	0	0.43338	1	4085	4085		55.504	6.0627	1	169530	+		1601	23536	1096	1097	1908	1908					0.07747242074322003
ALVLPTINS	9	Unmodified	_ALVLPTINS_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2813720703125	2	464.279118	926.543683	-0.4312	-0.0002002	0.8974	0.00041664	0.4662	0.00021645	464.27927604960144	51.423	0.73845	51.339	50.935	51.674	-0.084534					31	18	2	0	0	0	0.51307	1	4106	4106		51.335	8.9393	1	128270	+		1602	23536	1096	1097	1909	1909					0.07747242074322003
ALVLREKST	9	Unmodified	_ALVLREKST_					0	0	0		nc|ENSG00000046651|O75665-3|OFD1;ENSG00000046651|ENST00000340096|OFD1;nc|ENSG00000046651|O75665-2|OFD1;ENST00000490265.5_1_X:13753187-13770868:+|nuORF	nc|ENSG00000046651|O75665-3|OFD1	nc|ENSG00000046651|O75665-3|OFD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.8076171875	2	508.808574	1015.60259	-1.4188	-0.00072192	-0.25381	-0.00012914	-1.6726	-0.00085106	508.8083690833738	83.198	1.9743	83.336	82.638	84.612	0.13811					103	45	4	0	0	0	0.7932	1	7972	7972		20.947	0.95016	1	3643200			1603	952	1097	1098	1910	1910					0.09541718368666352
ALVLRNNSA	9	Unmodified	_ALVLRNNSA_					0	0	0		ENST00000456057.5_2_6:41757526-41757607:+|nuORF	ENST00000456057.5_2_6:41757526-41757607:+|nuORF	ENST00000456057.5_2_6:41757526-41757607:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2770690917969	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.78058	1	9080	9080		30.504	2.6214	1	7289200			1604	11962	1098	1099	1911	1911					0.06031992020314192
ALVLTPVIS	9	Unmodified	_ALVLTPVIS_					0	0	0			REV__ENSG00000186603|ENST00000334815|HPDL	REV__ENSG00000186603|ENST00000334815|HPDL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.78564453125	2	456.791861	911.569169	-1.2294	-0.00056156	2.5606	0.0011697	1.3313	0.00060812	456.79289004576646	40.059	1.2176	40.068	39.557	40.774	0.0092773					97	29	4	0	0	0	0.72402	1	2937	2937		38.806	5.2906	1	1129600	+		1605	22868	1099	1100	1912	1912					0.10984716596760791
ALVLTVPTL	9	Unmodified	_ALVLTVPTL_					0	0	0			REV__nc|ENSG00000160049|O00273-2|DFFA	REV__nc|ENSG00000160049|O00273-2|DFFA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.79998779296875	2	463.799686	925.584819	-0.080206	-3.7199E-05	1.9522	0.00090541	1.8719	0.00086821	463.80040731335265	41.41	1.3196	41.365	40.954	42.273	-0.045467					80	38	3	0	0	0	0.7932	1	2696	2696		23.042	2.0956	1	417210	+		1606	20690	1100	1101	1913	1913					0.11905003113804469
ALVLTVPTL	9	Unmodified	_ALVLTVPTL_					0	0	0			REV__nc|ENSG00000160049|O00273-2|DFFA	REV__nc|ENSG00000160049|O00273-2|DFFA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.8004455566406	2	463.799686	925.584819	-1.9529	-0.00090576	3.5624	0.0016523	1.6095	0.0007465	463.801178460678	42.067	1.8831	42.764	41.947	43.83	0.69754					154	47	4	0	0	0	0.77546	2	3850	3665;3850		31.955	5.1588	1	6253400	+		1607	20690	1100	1101	1914;1915	1915					0.11905003113804469
ALVLVQQQPRN	11	Unmodified	_ALVLVQQQPRN_					0	0	0			REV__ENSG00000136002|ENST00000409359|ARHGEF4	REV__ENSG00000136002|ENST00000409359|ARHGEF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5823059082031	3	422.582333	1264.72517	-0.18543	-7.8358E-05	-0.58125	-0.00024563	-0.76668	-0.00032399	422.58203704906714	97.831	3.5899	97.888	96.517	100.11	0.056831					202	83	4	0	0	0	0.72918	1	10327	10327		23.378	7.4573	1	436660	+		1608	19279	1101	1102	1916	1916					0.10339555100085818
ALVNIRLA	8	Unmodified	_ALVNIRLA_					0	0	0			REV__ENST00000546999.5_1_12:96374470-96386548:-|nuORF	REV__ENST00000546999.5_1_12:96374470-96386548:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.78094482421875	2	435.281995	868.549437	0.58498	0.00025463	-1.5996	-0.00069628	-1.0146	-0.00044165	435.2812045809477	63.09	0.81279	63.118	62.521	63.334	0.028133					50	36	2	0	0	0	0.4196	1	5889	5889		35.201	0	1	78381	+		1609	16869	1102	1103	1917	1917					0.10990385376658196
ALVNIRLA	8	Unmodified	_ALVNIRLA_					0	0	0			REV__ENST00000546999.5_1_12:96374470-96386548:-|nuORF	REV__ENST00000546999.5_1_12:96374470-96386548:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	435.281995	868.549437	0.39366	0.00017135	-1.7101	-0.00074437	-1.3164	-0.00057302	435.2813426828259	62.653	0.60141	62.774	62.613	63.214	0.1209	-0.16536	-0.00059628	NaN	35.201	48	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133970	+		1610	16869	1102	1103							0.10990385376658196
ALVNKFIGYLK	11	Unmodified	_ALVNKFIGYLK_					0	0	0		nc|ENSG00000165219|Q14C86-3|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;nc|ENSG00000165219|Q14C86-5|GAPVD1;ENSG00000165219|ENST00000297933|GAPVD1;nc|ENSG00000165219|Q14C86|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1	nc|ENSG00000165219|Q14C86-3|GAPVD1	nc|ENSG00000165219|Q14C86-3|GAPVD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.9270935058594	3	422.592058	1264.75434	0.3184	0.00013455	1.8461	0.00078016	2.1645	0.00091471	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.76579	1	4472	4472		18.531	0.69791	1	1249100			1611	6062	1103	1104	1918	1918					0.13255699396381715
ALVPLSLLLL	10	Unmodified	_ALVPLSLLLL_					0	0	0			REV__ENSG00000198804|ENST00000361624|MT-CO1	REV__ENSG00000198804|ENST00000361624|MT-CO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3612060546875	2	526.359911	1050.70527	-1.5923	-0.00083811	3.7176	0.0019568	2.1254	0.0011187	526.3617428180578	33.41	1.543	33.41	33.111	34.654	0					182	44	5	0	0	0	0.81018	1	1691	1691		38.806	1.647	1	7280900	+		1612	23387	1104	1105	1919	1919					0.18194411107424457
ALVPLSLLLL	10	Unmodified	_ALVPLSLLLL_					0	0	0			REV__ENSG00000198804|ENST00000361624|MT-CO1	REV__ENSG00000198804|ENST00000361624|MT-CO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3599853515625	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.85438	1	2355	2355		16.473	0	1	2706400	+		1613	23387	1104	1105	1920	1920					0.18194411107424457
ALVPLSLLLL	10	Unmodified	_ALVPLSLLLL_					0	0	0			REV__ENSG00000198804|ENST00000361624|MT-CO1	REV__ENSG00000198804|ENST00000361624|MT-CO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.361328125	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.86201	1	1798	1798		24.203	1.1603	1	1497200	+		1614	23387	1104	1105	1921	1921					0.18194411107424457
ALVPPVSSL	9	Unmodified	_ALVPPVSSL_					0	0	0		nc|ENSG00000179219|Q8N616|LINC00311	nc|ENSG00000179219|Q8N616|LINC00311	nc|ENSG00000179219|Q8N616|LINC00311	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.76800537109375	2	441.768386	881.522219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.344	1	63.367	62.867	63.867	0.022984								0	0	0	0.33301	1	5544	5544		19.36	0	1				1615	15125	1105	1106	1922	1922					0.07671857045625075
ALVPRHIFV	9	Unmodified	_ALVPRHIFV_					0	0	0			REV__ENST00000571963.5_1_16:3181818-3184710:-|nuORF	REV__ENST00000571963.5_1_16:3181818-3184710:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.321533203125	2	526.324194	1050.63383	-0.53497	-0.00028157	1.5071	0.00079323	0.97214	0.00051166	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.7932	1	5189	5189		25.45	3.7478	1	220370	+		1616	28935	1106	1107	1923	1923					0.110543361934333
ALVPSLGLI	9	Unmodified	_ALVPSLGLI_					0	0	0		ENST00000393931.7_1_17:39911314-39911869:-|nuORF	ENST00000393931.7_1_17:39911314-39911869:-|nuORF	ENST00000393931.7_1_17:39911314-39911869:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.787109375	2	441.786579	881.558604	-1.2332	-0.00054481	3.5907	0.0015863	2.3575	0.0010415	441.7880163081002	41.793	3.3981	41.755	40.553	43.951	-0.038223					227	85	5	0	0	0	0.77546	1	3336	3336		31.955	6.5047	1	13573000			1617	11055	1107	1108	1924	1924					0.11308733942325944
ALVPSLGLI	9	Unmodified	_ALVPSLGLI_					0	0	0		ENST00000393931.7_1_17:39911314-39911869:-|nuORF	ENST00000393931.7_1_17:39911314-39911869:-|nuORF	ENST00000393931.7_1_17:39911314-39911869:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.78802490234375	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.64338	1	2941	2941		44.531	9.3304	1	10128000			1618	11055	1107	1108	1925	1925					0.11308733942325944
ALVPVLSN	8	Unmodified	_ALVPVLSN_					0	0	0		ENST00000251582.11_1_5:178549682-178552025:-|nuORF	ENST00000251582.11_1_5:178549682-178552025:-|nuORF	ENST00000251582.11_1_5:178549682-178552025:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.78509521484375	2	406.747453	811.480354	-0.72566	-0.00029516	3.9008	0.0015866	3.1752	0.0012915	406.74930189771305	35.285	0.77904	35.228	34.962	35.741	-0.056385					23	17	2	0	0	0	0.4196	1	2339	2339		38.806	1.647	1	30785			1619	9303	1108	1109	1926	1926					0.06707301357096185
ALVPVLSN	8	Unmodified	_ALVPVLSN_					0	0	0		ENST00000251582.11_1_5:178549682-178552025:-|nuORF	ENST00000251582.11_1_5:178549682-178552025:-|nuORF	ENST00000251582.11_1_5:178549682-178552025:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.747453	811.480354	-1.9523	-0.00079411	5.298	0.0021549	3.3456	0.0013608	406.7496574593153	35.013	0.92248	35.013	34.762	35.684	0	-0.09621	0.00083331	NaN	38.806	38	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44200			1620	9303	1108	1109							0.06707301357096185
ALVQHGAAI	9	Unmodified	_ALVQHGAAI_					0	0	0		ENSG00000104881|ENST00000360957|PPP1R13L	ENSG00000104881|ENST00000360957|PPP1R13L	ENSG00000104881|ENST00000360957|PPP1R13L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.25482177734375	2	440.255977	878.497401	0.13015	5.7301E-05	-1.6838	-0.00074131	-1.5537	-0.00068401	440.2551148846597	60.577	0.73638	60.608	60.275	61.012	0.0312					48	22	3	0	0	0	0.7932	1	5638	5638		26.796	5.0938	1	201780			1621	2159	1109	1110	1927	1927					0.05329221962904285
ALVRALWK	8	Unmodified	_ALVRALWK_					0	0	0		ENSG00000086506|ENST00000199708|HBQ1	ENSG00000086506|ENST00000199708|HBQ1	ENSG00000086506|ENST00000199708|HBQ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8048400878906	2	478.805637	955.596721	0.18646	8.928E-05	0.43935	0.00021037	0.62582	0.00029964	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.80706	1	2657	2657		19.36	4.6959	1	371600			1622	1555	1110	1111	1928	1928					0.11714664647649897
ALVRALWK	8	Unmodified	_ALVRALWK_					0	0	0		ENSG00000086506|ENST00000199708|HBQ1	ENSG00000086506|ENST00000199708|HBQ1	ENSG00000086506|ENST00000199708|HBQ1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.80364990234375	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.377	1	42.442	41.942	42.942	0.065037								0	0	0	0.29631	1	2845	2845		25.45	4.9683	1				1623	1555	1110	1111	1929	1929					0.11714664647649897
ALVRDPRVLI	10	Unmodified	_ALVRDPRVLI_					0	0	0		nc|ENSG00000204267|Q03519-2|TAP2;ENSG00000204267|ENST00000374897|TAP2	nc|ENSG00000204267|Q03519-2|TAP2	nc|ENSG00000204267|Q03519-2|TAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	576.3682861328125	2	576.36659	1150.71863	-0.59734	-0.00034429	4.2032	0.0024226	3.6059	0.0020783	576.3688660240562	41.302	0.99789	41.271	40.993	41.991	-0.030987					63	25	3	0	0	0	0.86272	1	3022	3022		24.519	0.31644	1	277840			1624	8426	1111	1112	1930	1930					0.14929661939368088
ALVRKAIV	8	Unmodified	_ALVRKAIV_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3003845214844	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.81724	1	7023	7023		14.664	0	1	1680500			1625	720	1112	1113	1931	1931					0.14627262273370434
ALVRKAIV	8	Unmodified	_ALVRKAIV_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3003234863281	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81548	1	8425	8425		20.482	5.8177	1	6323600			1626	720	1112	1113	1932	1932					0.14627262273370434
ALVRMCSSM	9	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))ALVRM(Oxidation (M))CSSM_		ALVRM(0.999)CSSM(0.001)		ALVRM(31)CSSM(-31)	1	0	1		chr10:131973943-131977684|18|14.39|0.16|6.53|-|0|TE_info:MLT1A0,MLT1A0_dup14030,ERVL-MaLR,LTR,donor,-,131977684,131977735|BNIP3,None|1	chr10:131973943-131977684|18|14.39|0.16|6.53|-|0|TE_info:MLT1A0,MLT1A0_dup14030,ERVL-MaLR,LTR,donor,-,131977684,131977735|BNIP3,None|1	chr10:131973943-131977684|18|14.39|0.16|6.53|-|0|TE_info:MLT1A0,MLT1A0_dup14030,ERVL-MaLR,LTR,donor,-,131977684,131977735|BNIP3,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.2373046875	2	528.237755	1054.46096	0.23275	0.00012295	-0.72134	-0.00038104	-0.48859	-0.00025809	528.237509942909	70.47	0.70879	70.854	70.585	71.294	0.38416					40	16	3	0	0	0	0.55097	1	7818	7818		49.442	7.0454	2	564830			1627	68	1113	1114	1933	1933		1			-0.06409482311983083
ALVSLEPLLA	10	Unmodified	_ALVSLEPLLA_					0	0	0			REV__nc|ENSG00000125844|Q9P2E9-3|RRBP1	REV__nc|ENSG00000125844|Q9P2E9-3|RRBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3165283203125	2	513.3157	1024.61685	-0.78904	-0.00040502	2.024	0.0010389	1.2349	0.00063391	513.316563461299	43.382	2.0824	43.347	42.842	44.924	-0.035816					87	48	3	0	0	0	0.85934	1	3367	3367		35.618	5.1146	1	377070	+		1628	18673	1114	1115	1934	1934					0.10552370796972355
ALVSLLLLLP	10	Unmodified	_ALVSLLLLLP_					0	0	0		ENSG00000095587|ENST00000357947|TLL2	ENSG00000095587|ENST00000357947|TLL2	ENSG00000095587|ENST00000357947|TLL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3605346679688	2	526.359911	1050.70527	0.086645	4.5607E-05	2.1771	0.0011459	2.2637	0.0011915	526.3609236587663	33.368	2.0596	33.371	32.762	34.822	0.0030785					171	48	5	0	0	0	0.85438	1	1906	1906		16.473	0.83134	1	3096800			1629	1732	1115	1116	1935	1935					0.18194411107424457
ALVSLLLLLP	10	Unmodified	_ALVSLLLLLP_					0	0	0		ENSG00000095587|ENST00000357947|TLL2	ENSG00000095587|ENST00000357947|TLL2	ENSG00000095587|ENST00000357947|TLL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3602294921875	2	526.359911	1050.70527	-0.46682	-0.00024572	2.8843	0.0015182	2.4174	0.0012724	526.3612792747932	37.192	2.9497	37.138	36.203	39.152	-0.053555					173	66	5	0	0	0	0.85939	1	2448	2448		23.042	0	1	2681300			1630	1732	1115	1116	1936	1936					0.18194411107424457
ALVSLLLLLP	10	Unmodified	_ALVSLLLLLP_					0	0	0		ENSG00000095587|ENST00000357947|TLL2	ENSG00000095587|ENST00000357947|TLL2	ENSG00000095587|ENST00000357947|TLL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3617553710938	2	526.359911	1050.70527	0.41493	0.0002184	1.9977	0.0010515	2.4127	0.0012699	526.3608149931753	33.292	1.7707	33.259	32.845	34.615	-0.032677					246	76	5	0	0	0	0.8488	1	1689	1689		17.365	0	1	5110100			1631	1732	1115	1116	1937	1937					0.18194411107424457
ALVSLLLLLP	10	Unmodified	_ALVSLLLLLP_					0	0	0		ENSG00000095587|ENST00000357947|TLL2	ENSG00000095587|ENST00000357947|TLL2	ENSG00000095587|ENST00000357947|TLL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3612670898438	2	526.359911	1050.70527	0.76967	0.00040513	1.4348	0.00075522	2.2045	0.0011603	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.86482	1	2416	2416		25.45	1.2474	1	7968500			1632	1732	1115	1116	1938	1938					0.18194411107424457
ALVSPKAK	8	Unmodified	_ALVSPKAK_					0	0	0			REV__nc|ENSG00000138764|Q16589-2|CCNG2	REV__nc|ENSG00000138764|Q16589-2|CCNG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.2682800292969	2	407.263271	812.511988	-0.1146	-4.6671E-05	3.967	0.0016156	3.8524	0.001569	407.264800655995	36.283	1.5728	36.264	35.692	37.265	-0.018673					54	34	2	0	0	0	0.8347	1	2310	2310		23.042	0	1	126190	+		1633	19503	1116	1117	1939	1939					0.09823294111038194
ALVSTLVPL	9	Unmodified	_ALVSTLVPL_					0	0	0		ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79150390625	2	456.791861	911.569169	0.23747	0.00010847	2.1705	0.00099146	2.408	0.0010999	456.79269786067573	42.365	2.4539	42.43	41.781	44.235	0.065037					168	63	3	0	0	0	0.7932	2	2899	2899;3051		23.042	3.6825	1	556840			1634	5747	1117	1118	1940;1941	1940					0.10984716596760791
ALVSTLVPL	9	Unmodified	_ALVSTLVPL_					0	0	0		ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7922668457031	2	456.791861	911.569169	0.30037	0.00013721	2.5195	0.0011509	2.8199	0.0012881	456.79289757972145	49.9	2.3678	49.942	48.602	50.969	0.04224					107	64	2	0	0	0	0.7932	1	3891	3891		24.203	0	1	208080			1635	5747	1117	1118	1942	1942					0.10984716596760791
ALVSTLVPL	9	Unmodified	_ALVSTLVPL_					0	0	0		ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7922668457031	2	456.791861	911.569169	0.14837	6.7774E-05	2.6615	0.0012157	2.8099	0.0012835	456.79297860960025	37.636	1.5872	38.122	37.704	39.291	0.48581					149	39	5	0	0	0	0.72402	1	3107	3107		38.806	0	1	8942200			1636	5747	1117	1118	1943	1943					0.10984716596760791
ALVSTPVRTK	10	Unmodified	_ALVSTPVRTK_					0	0	0		nc|ENSG00000141027|O75376-2|NCOR1;ENSG00000141027|ENST00000268712|NCOR1;ENST00000470782.5_1_17:15935612-15971511:-|nuORF;ENST00000464381.5_1_17:15935612-15961439:-|nuORF;ENST00000472189.1_1_17:15960700-15961247:-|nuORF	nc|ENSG00000141027|O75376-2|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.3306274414062	2	536.329673	1070.64479	-0.54217	-0.00029078	0.49658	0.00026633	-0.045582	-2.4447E-05	536.3298194759121	31.773	0.55525	31.873	31.578	32.133	0.099632					28	12	3	0	0	0	0.42897	2	2164	2164;2180		61.691	20.913	1	323310			1637	4476	1118	1119	1944;1945	1944					0.11229693777045213
ALVSTPVRTK	10	Unmodified	_ALVSTPVRTK_					0	0	0		nc|ENSG00000141027|O75376-2|NCOR1;ENSG00000141027|ENST00000268712|NCOR1;ENST00000470782.5_1_17:15935612-15971511:-|nuORF;ENST00000464381.5_1_17:15935612-15961439:-|nuORF;ENST00000472189.1_1_17:15960700-15961247:-|nuORF	nc|ENSG00000141027|O75376-2|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.32958984375	2	536.329673	1070.64479	0.096434	5.172E-05	-0.51092	-0.00027402	-0.41449	-0.0002223	536.3291981076486	31.673	0.59839	31.781	31.548	32.146	0.10707					29	13	3	0	0	0	0.4503	1	2180	2180		59.931	6.5793	1	417060			1638	4476	1118	1119	1946	1946					0.11229693777045213
ALVTAALLP	9	Unmodified	_ALVTAALLP_					0	0	0			REV__ENSG00000154447|ENST00000284637|SH3RF1	REV__ENSG00000154447|ENST00000284637|SH3RF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7796325683594	2	434.778754	867.542954	-0.097946	-4.2585E-05	2.9953	0.0013023	2.8973	0.0012597	434.7799034741548	53.402	2.1549	53.397	52.578	54.733	-0.0053673					128	65	3	0	0	0	0.7932	1	4727	4727		24.203	1.1603	1	357680	+		1639	20388	1119	1120	1947	1947					0.10388447425293634
ALVTAALLP	9	Unmodified	_ALVTAALLP_					0	0	0			REV__ENSG00000154447|ENST00000284637|SH3RF1	REV__ENSG00000154447|ENST00000284637|SH3RF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77984619140625	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.7932	1	2851	2851		25.45	1.2474	1	2537300	+		1640	20388	1119	1120	1948	1948					0.10388447425293634
ALVTAALLP	9	Unmodified	_ALVTAALLP_					0	0	0			REV__ENSG00000154447|ENST00000284637|SH3RF1	REV__ENSG00000154447|ENST00000284637|SH3RF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78009033203125	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.76996	1	2213	2213		33.516	0	1	2486400	+		1641	20388	1119	1120	1949	1949					0.10388447425293634
ALVTAALLP	9	Unmodified	_ALVTAALLP_					0	0	0			REV__ENSG00000154447|ENST00000284637|SH3RF1	REV__ENSG00000154447|ENST00000284637|SH3RF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7787170410156	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.7932	1	3569	3569		18.324	0	1	6567600	+		1642	20388	1119	1120	1950	1950					0.10388447425293634
ALVTGILPK	9	Unmodified	_ALVTGILPK_					0	0	0			REV__ENSG00000179776|ENST00000341529|CDH5	REV__ENSG00000179776|ENST00000341529|CDH5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.301025390625	2	456.299853	910.585153	-1.7466	-0.00079699	4.271	0.0019489	2.5244	0.0011519	456.30164650413656	48.155	1.4761	48.155	47.668	49.144	0					86	41	3	0	0	0	0.78058	1	3741	3741		30.504	7.4612	1	227150	+		1643	22354	1120	1121	1951	1951					0.1262842283366581
ALVTGILPK	9	Unmodified	_ALVTGILPK_					0	0	0			REV__ENSG00000179776|ENST00000341529|CDH5	REV__ENSG00000179776|ENST00000341529|CDH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3011779785156	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.77546	1	2083	2083		31.955	5.1588	1	1715600	+		1644	22354	1120	1121	1952	1952					0.1262842283366581
ALVTGILPK	9	Unmodified	_ALVTGILPK_					0	0	0			REV__ENSG00000179776|ENST00000341529|CDH5	REV__ENSG00000179776|ENST00000341529|CDH5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.301513671875	2	456.299853	910.585153	-0.34519	-0.00015751	3.1038	0.0014163	2.7586	0.0012588	456.30112978669194	48.146	1.4143	48.053	47.615	49.029	-0.093178					75	35	3	0	0	0	0.64922	1	3682	3682		44.117	5.3107	1	317120	+		1645	22354	1120	1121	1953	1953					0.1262842283366581
ALVTGILPK	9	Unmodified	_ALVTGILPK_					0	0	0			REV__ENSG00000179776|ENST00000341529|CDH5	REV__ENSG00000179776|ENST00000341529|CDH5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3009338378906	2	456.299853	910.585153	-0.032958	-1.5039E-05	2.9428	0.0013428	2.9098	0.0013278	456.3010618832383	34.27	2.0114	34.48	34.107	36.119	0.21003					105	50	4	0	0	0	0.78058	1	2570	2570		30.504	3.7075	1	1566600	+		1646	22354	1120	1121	1954	1954					0.1262842283366581
ALVTGILPK	9	Unmodified	_ALVTGILPK_					0	0	0			REV__ENSG00000179776|ENST00000341529|CDH5	REV__ENSG00000179776|ENST00000341529|CDH5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.3008728027344	2	456.299853	910.585153	1.12	0.00051105	1.6845	0.00076862	2.8045	0.0012797	456.3004764571391	34.144	1.6348	34.449	34.076	35.711	0.30495					98	40	4	0	0	0	0.78058	1	2561	2561		30.504	6.3009	1	1747200	+		1647	22354	1120	1121	1955	1955					0.1262842283366581
ALVTIITVP	9	Unmodified	_ALVTIITVP_					0	0	0		ENSG00000197635|ENST00000360534|DPP4;ENST00000461836.5_1_2:162903409-162929972:-|nuORF	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80072021484375	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.7932	1	3393	3393		19.36	1.0356	1	279560			1648	8186	1121	1122	1956	1956					0.119050031137931
ALVTIITVP	9	Unmodified	_ALVTIITVP_					0	0	0		ENSG00000197635|ENST00000360534|DPP4;ENST00000461836.5_1_2:162903409-162929972:-|nuORF	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8009948730469	2	463.799686	925.584819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.111	1	46.083	45.583	46.583	-0.028782								0	0	0	0.32159	1	3771	3771		23.042	4.7181	1				1649	8186	1121	1122	1957	1957					0.119050031137931
ALVTIITVP	9	Unmodified	_ALVTIITVP_					0	0	0		ENSG00000197635|ENST00000360534|DPP4;ENST00000461836.5_1_2:162903409-162929972:-|nuORF	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8024597167969	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.7932	1	3315	3315		18.324	0.95945	1	210360			1650	8186	1121	1122	1958	1958					0.119050031137931
ALVTLALAP	9	Unmodified	_ALVTLALAP_					0	0	0		ENST00000373615.8_2_9:126774341-126774419:+|nuORF	ENST00000373615.8_2_9:126774341-126774419:+|nuORF	ENST00000373615.8_2_9:126774341-126774419:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7786560058594	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.7932	1	2960	2960		26.796	1.3459	1	2938700			1651	10747	1122	1123	1959	1959					0.10388447425282266
ALVTLALAP	9	Unmodified	_ALVTLALAP_					0	0	0		ENST00000373615.8_2_9:126774341-126774419:+|nuORF	ENST00000373615.8_2_9:126774341-126774419:+|nuORF	ENST00000373615.8_2_9:126774341-126774419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.780029296875	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.76996	1	3833	3833		33.516	8.0654	1	6567600			1652	10747	1122	1123	1960	1960					0.10388447425282266
ALVTLGSSK	9	Unmodified	_ALVTLGSSK_					0	0	0		ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2677917480469	2	438.263468	874.512382	-1.2243	-0.00053657	1.2123	0.00053132	-0.011973	-5.2472E-06	438.26393038892036	47.513	0.89539	47.984	47.693	48.589	0.47139					32	22	2	0	0	0	0.20789	1	4617	4617		27.882	8.7787	1	305820			1653	3770	1123	1124	1961	1961					0.07010669040244011
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3610229492188	2	526.359911	1050.70527	-1.5923	-0.00083811	3.7176	0.0019568	2.1254	0.0011187	526.3617428180578	33.41	1.543	33.41	33.111	34.654	0					182	44	5	0	0	0	0.86201	3	1783	1723;1744;1783		30.504	3.7075	1	7280900			1654	2433	1124	1125	1962;1963;1964	1964					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3609619140625	2	526.359911	1050.70527	-1.5676	-0.00082514	3.904	0.0020549	2.3364	0.0012298	526.3617973555264	35.031	1.6441	35.031	34.615	36.259	0					148	43	4	0	0	0	0.8488	2	2011	1950;2011		29.15	6.1071	1	1307600			1655	2433	1124	1125	1965;1966	1966					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3609619140625	2	526.359911	1050.70527	-1.5421	-0.00081169	4.0218	0.0021169	2.4797	0.0013052	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.85694	3	2218	2170;2218;2242		29.15	4.5949	1	788470			1656	2433	1124	1125	1967;1968;1969	1968					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3611450195312	2	526.359911	1050.70527	0.086645	4.5607E-05	2.1771	0.0011459	2.2637	0.0011915	526.3609236587663	33.368	2.0596	33.371	32.762	34.822	0.0030785					171	48	5	0	0	0	0.81018	2	1990	1990;2025		38.806	8.3025	1	3096800			1657	2433	1124	1125	1970;1971	1970					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3609619140625	2	526.359911	1050.70527	-0.016718	-8.7995E-06	2.2479	0.0011832	2.2312	0.0011744	526.3609420824897	35.324	1.4285	35.312	34.729	36.157	-0.012199					134	33	5	0	0	0	0.777	4	2217	2160;2181;2217;2229		40.573	6.3009	1	5338900			1658	2433	1124	1125	1972;1973;1974;1975	1974					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3612060546875	2	526.359911	1050.70527	0.054232	2.8545E-05	1.9819	0.0010432	2.0362	0.0010718	526.3608595612541	33.548	1.6551	33.491	33.113	34.768	-0.056385					153	37	5	0	0	0	0.6398	6	2088	2029;2065;2088;2123;2144;2156		47.916	15.961	1	7840300			1659	2433	1124	1125	1976;1977;1978;1979;1980;1981	1978					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.35986328125	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.85939	2	2423	2267;2423		24.203	5.8783	1	2871800			1660	2433	1124	1125	1982;1983	1983					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3607788085938	2	526.359911	1050.70527	-0.46682	-0.00024572	2.8843	0.0015182	2.4174	0.0012724	526.3612792747932	37.192	2.9497	37.138	36.203	39.152	-0.053555					173	66	5	0	0	0	0.86452	1	2616	2616		30.504	6.3009	1	2681300			1661	2433	1124	1125	1984	1984					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3610229492188	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.67608	2	2048	1945;2048		45.952	21.749	1	5020100			1662	2433	1124	1125	1985;1986	1986					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3607788085938	2	526.359911	1050.70527	-0.47346	-0.00024921	2.7476	0.0014462	2.2741	0.001197	526.3612126681783	35.14	1.5704	35.146	34.727	36.297	0.0063934					147	36	5	0	0	0	0.86201	3	2209	2178;2209;2232		30.504	6.3009	1	2682400			1663	2433	1124	1125	1987;1988;1989	1988					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3604125976562	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.86201	2	2330	2330;2343		30.504	6.8378	1	2706400			1664	2433	1124	1125	1990;1991	1990					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3613891601562	2	526.359911	1050.70527	-0.23001	-0.00012107	2.5809	0.0013585	2.3509	0.0012374	526.3611422284945	33.372	1.4852	33.418	33.076	34.561	0.045849					221	65	5	0	0	0	0.777	2	1599	1599;1607		40.573	10.069	1	5657100			1665	2433	1124	1125	1992;1993	1992					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3612060546875	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.86201	3	1791	1791;1839;1921		30.504	6.3009	1	1497200			1666	2433	1124	1125	1994;1995;1996	1994					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3609008789062	2	526.359911	1050.70527	-0.2233	-0.00011753	2.7139	0.0014285	2.4906	0.0013109	526.3612023516472	37.188	2.125	37.212	36.022	38.147	0.023624					163	60	4	0	0	0	0.85958	2	2162	2119;2162		30.504	6.3009	1	1504200			1667	2433	1124	1125	1997;1998	1998					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3613891601562	2	526.359911	1050.70527	0.22046	0.00011604	2.2181	0.0011675	2.4386	0.0012836	526.3609252843382	33.187	1.6469	33.296	32.993	34.64	0.10991					241	72	5	0	0	0	0.81018	7	1612	1580;1588;1596;1605;1612;1620;1646		38.806	14.603	1	5657400			1668	2433	1124	1125	1999;2000;2001;2002;2003;2004;2005	2003					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3611450195312	2	526.359911	1050.70527	0.41493	0.0002184	1.9977	0.0010515	2.4127	0.0012699	526.3608149931753	33.292	1.7707	33.259	32.845	34.615	-0.032677					246	76	5	0	0	0	0.81018	5	1612	1585;1612;1639;1664;1671		38.806	11.785	1	5110100			1669	2433	1124	1125	2006;2007;2008;2009;2010	2007					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3610229492188	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.86305	1	1839	1839		31.955	6.5047	1	1221500			1670	2433	1124	1125	2011	2011					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3612670898438	2	526.359911	1050.70527	0.76967	0.00040513	1.4348	0.00075522	2.2045	0.0011603	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.67608	2	2353	2353;2389		45.952	8.7928	1	7968500			1671	2433	1124	1125	2012;2013	2012					0.1819441110740172
ALVTLLVPLL	10	Unmodified	_ALVTLLVPLL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.361083984375	2	526.359911	1050.70527	1.0713	0.00056389	1.2303	0.0006476	2.3016	0.0012115	526.360423923534	32.788	1.6436	32.999	32.422	34.066	0.21168					152	38	5	0	0	0	0.86201	3	2359	2359;2407;2421		31.955	6.5047	1	7743700			1672	2433	1124	1125	2014;2015;2016	2014					0.1819441110740172
ALVTPLLPTS	10	Unmodified	_ALVTPLLPTS_					0	0	0			REV__ENST00000296506.7_1_4:174320275-174320425:-|nuORF	REV__ENST00000296506.7_1_4:174320275-174320425:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3073425292969	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.656	1	50.564	50.064	51.064	-0.091797								0	0	0	0.45132	1	3993	3993		20.947	2.6225	1		+		1673	24714	1125	1126	2017	2017					0.0963208427989457
ALVTSTLPPL	10	Unmodified	_ALVTSTLPPL_					0	0	0		nc|ENSG00000065883|Q14004-2|CDK13;ENSG00000065883|ENST00000181839|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3092956542969	2	506.307875	1010.6012	-0.51799	-0.00026226	3.1236	0.0015815	2.6057	0.0013193	506.3093718182139	39.546	1.0298	39.553	39.041	40.071	0.0065002					44	26	2	0	0	0	0.85694	1	2457	2457		21.96	1.013	1	125680			1674	1144	1126	1127	2018	2018					0.09632084279917308
ALVTSTLPPL	10	Unmodified	_ALVTSTLPPL_					0	0	0		nc|ENSG00000065883|Q14004-2|CDK13;ENSG00000065883|ENST00000181839|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.308837890625	2	506.307875	1010.6012	0.3191	0.00016156	2.0004	0.0010128	2.3195	0.0011744	506.3087607672274	46.383	1.7392	46.421	45.728	47.467	0.038181					61	47	2	0	0	0	0.85694	1	3412	3412		21.96	1.013	1	157780			1675	1144	1126	1127	2019	2019					0.09632084279917308
ALVTSTLPPL	10	Unmodified	_ALVTSTLPPL_					0	0	0		nc|ENSG00000065883|Q14004-2|CDK13;ENSG00000065883|ENST00000181839|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3089599609375	2	506.307875	1010.6012	0.34662	0.0001755	1.6254	0.00082296	1.972	0.00099845	506.81007684679236	49.469	1.8985	49.512	48.558	50.457	0.04224					78	46	2	0	0	0	0.74274	1	3828	3828		42.396	0	1	315680			1676	1144	1126	1127	2020	2020					0.09632084279917308
ALVTSTLPPL	10	Unmodified	_ALVTSTLPPL_					0	0	0		nc|ENSG00000065883|Q14004-2|CDK13;ENSG00000065883|ENST00000181839|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3053894042969	2	506.307875	1010.6012	0.36813	0.00018639	1.8165	0.00091972	2.1847	0.0011061	506.3087401275949	51.82	1.4912	51.879	51.289	52.78	0.059719					73	45	2	0	0	0	0.85939	1	4241	4241		23.042	1.0826	1	160650			1677	1144	1126	1127	2021	2021					0.09632084279917308
ALVTSTLPPL	10	Unmodified	_ALVTSTLPPL_					0	0	0		nc|ENSG00000065883|Q14004-2|CDK13;ENSG00000065883|ENST00000181839|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.308837890625	2	506.307875	1010.6012	-0.22503	-0.00011393	2.1509	0.001089	1.9259	0.00097507	506.3089485725691	49.441	1.8113	49.348	48.371	50.182	-0.093182					75	43	2	0	0	0	0.86718	2	3817	3817;3844		27.882	4.8398	1	253850			1678	1144	1126	1127	2022;2023	2022					0.09632084279917308
ALVVIVKA	8	Unmodified	_ALVVIVKA_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7853698730469	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.82419	1	1686	1686		13.775	4.3048	1	1965300	+		1679	29448	1127	1128	2024	2024					0.1398105515052066
ALVVIVKA	8	Unmodified	_ALVVIVKA_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7846374511719	2	406.783839	811.553125	1.6742	0.00068103	2.1022	0.00085513	3.7764	0.0015362	406.78458476785784	34.278	1.4525	34.281	33.794	35.247	0.0026054					117	34	4	0	0	0	0.86791	1	2188	2188		28.254	0	1	2275400	+		1680	29448	1127	1128	2025	2025					0.1398105515052066
ALVVIVKA	8	Unmodified	_ALVVIVKA_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78521728515625	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.86294	1	1769	1769		8.8223	0	1	1756100	+		1681	29448	1127	1128	2026	2026					0.1398105515052066
ALVVIVKA	8	Unmodified	_ALVVIVKA_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.785400390625	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.846	1	30.958	30.458	31.458	0.11198								0	0	0	0.31173	1	1386	1386		4.6817	0	1		+		1682	29448	1127	1128	2027	2027					0.1398105515052066
ALVVIVKA	8	Unmodified	_ALVVIVKA_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78515625	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.81724	1	1395	1395		14.664	0	1	1817700	+		1683	29448	1127	1128	2028	2028					0.1398105515052066
ALVVIVKA	8	Unmodified	_ALVVIVKA_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7848815917969	2	406.783839	811.553125	0.022938	9.3307E-06	3.6731	0.0014942	3.696	0.0015035	406.7851827724374	33.215	0.93484	33.182	32.78	33.715	-0.032677					97	42	3	0	0	0	0.81548	1	1586	1586		20.482	5.8177	1	368720	+		1684	29448	1127	1128	2029	2029					0.1398105515052066
ALVVIVKA	8	Unmodified	_ALVVIVKA_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.784912109375	2	406.783839	811.553125	1.1655	0.00047412	2.3762	0.00096659	3.5417	0.0014407	406.7846691604622	32.902	0.76672	33.072	32.59	33.356	0.16971					56	17	4	0	0	0	0.80706	1	2307	2307		19.36	0	1	1453200	+		1685	29448	1127	1128	2030	2030					0.1398105515052066
ALVVIVKA	8	Unmodified	_ALVVIVKA_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78521728515625	2	406.783839	811.553125	0.12711	5.1707E-05	3.399	0.0013826	3.5261	0.0014344	406.78513803821613	31.106	0.82648	31.109	30.404	31.23	0.0037212					29	18	2	0	0	0	0.82419	1	2101	2101		13.775	4.953	1	2249400	+		1686	29448	1127	1128	2031	2031					0.1398105515052066
ALVVKHAM	8	Unmodified	_ALVVKHAM_					0	0	0			REV__ENSG00000079999|ENST00000171111|KEAP1	REV__ENSG00000079999|ENST00000171111|KEAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7597351074219	2	434.757298	867.500044	1.0426	0.00045328	2.9807	0.0012959	4.0233	0.0017492	434.7588689622068	87.637	3.2918	87.563	86.012	89.304	-0.073997					167	77	4	0	0	0	0.88915	1	9083	9083		35.201	8.4046	1	1572200	+		1687	16794	1128	1129	2032	2032					0.06099354096204479
ALVVPEELL	9	Unmodified	_ALVVPEELL_					0	0	0			REV__ENSG00000117448|ENST00000351829|AKR1A1	REV__ENSG00000117448|ENST00000351829|AKR1A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7953796386719	2	491.794601	981.574648	0.16895	8.3091E-05	2.0671	0.0010166	2.2361	0.0010997	491.795491652363	46.653	1.8507	46.639	45.976	47.827	-0.013821					152	52	4	0	0	0	0.77546	1	3885	3885		31.955	1.4512	1	2674700	+		1688	18262	1129	1130	2033	2033					0.08312395388577443
ALVYQDYQYL	10	Unmodified	_ALVYQDYQYL_					0	0	0		nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	638.3168334960938	2	638.316428	1274.6183	1.2406	0.0007919	-0.85069	-0.00054301	0.38992	0.00024889	638.3157834446171	71.864	1.5253	72.415	72.071	73.597	0.55009					104	36	5	0	0	0	0.80179	1	8092	8092		39.253	2.8061	1	7237600			1689	15323	1130	1131	2034	2034					-0.00802039904965568
ALVYVISG	8	Unmodified	_ALVYVISG_					0	0	0			REV__ENSG00000122550|ENST00000339077|KLHL7	REV__ENSG00000122550|ENST00000339077|KLHL7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.24395751953125	2	411.242004	820.469455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.71	1	103	102.5	103.5	0.29865								0	0	0	0.29498	1	12521	12521		26.796	5.0938	1		+		1690	18504	1131	1132	2035	2035					0.05203898982813371
ALWAGLWP	8	Unmodified	_ALWAGLWP_					0	0	0		ENST00000493076.5_1_22:35806581-35817581:+|nuORF	ENST00000493076.5_1_22:35806581-35817581:+|nuORF	ENST00000493076.5_1_22:35806581-35817581:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.26397705078125	2	457.250163	912.485774	0.38399	0.00017558	1.7915	0.00081918	2.1755	0.00099476	457.25071183841595	81.531	0.98915	81.589	81.04	82.029	0.057816					28	22	2	0	0	0	0.4196	1	8172	8172		24.504	0	1	41251			1691	12716	1132	1133	2036	2036					0.026030249395603278
ALWCIKGRV	9	Unmodified	_ALWCIKGRV_					0	0	0			REV__ENST00000458113.6_1_17:15983677-15983818:-|nuORF	REV__ENST00000458113.6_1_17:15983677-15983818:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3026123046875	2	523.302404	1044.59026	1.2403	0.00064907	1.1984	0.00062712	2.4387	0.0012762	523.302929168532	91.415	2.5669	91.46	91.141	93.708	0.045448					111	60	2	0	0	0	0.77546	1	9483	9483		31.955	0.42505	1	1018700	+		1692	26981	1133	1134	2037	2037					0.06974403424624143
ALWGGYGLVLA	11	Unmodified	_ALWGGYGLVLA_					0	0	0			REV__ENST00000603132.1_1_12:55196819-55197167:-|nuORF	REV__ENST00000603132.1_1_12:55196819-55197167:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3403930664062	2	560.313492	1118.61243	-1.1184	-0.00062663	4.007	0.0022452	2.8887	0.0016186	560.3163731539709	102.6	0.19824	102.61	102.47	102.67	0.0082016					5	4	2	0	0	0	0.17378	1	10986	10986		31.955	5.2619	1	368510	+		1693	29344	1134	1135	2038	2038					0.057869063740326965
ALWHGALTLLL	11	Unmodified	_ALWHGALTLLL_					0	0	0			REV__nc|ENSG00000104133|Q96JI7-2|SPG11	REV__nc|ENSG00000104133|Q96JI7-2|SPG11	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3670043945312	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.62	1	117.6	117.1	118.1	-0.02433								0	0	0	0.56276	1	13023	13023		2.9294	0	1		+		1694	17438	1135	1136	2039	2039					0.11739143707859512
ALWKDAVPPVI	11	Unmodified	_ALWKDAVPPVI_					0	0	0		ENST00000505189.5_3_4:159133255-159133342:+|nuORF	ENST00000505189.5_3_4:159133255-159133342:+|nuORF	ENST00000505189.5_3_4:159133255-159133342:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.57470703125	3	403.572775	1207.69649	0.92254	0.00037231	3.7444	0.0015112	4.667	0.0018835	403.57437110018327	80.894	0.89915	81.316	80.891	81.79	0.4215					88	21	5	0	0	0	0.56641	1	9284	9284		47.228	5.8011	1	18400000			1695	12919	1136	1137	2040	2040					0.10095437470931756
ALWNLSAH	8	Unmodified	_ALWNLSAH_					0	0	0		nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000115266|O95996-3|APC2;ENSG00000115266|ENST00000590469|APC2;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC;ENSG00000134982|ENST00000257430|APC	nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000134982|P25054-2|APC	nc|ENSG00000115266|O95996-2|APC2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6083984375	2	456.240327	910.466101	-1.2053	-0.00054991	3.5178	0.001605	2.3125	0.0010551	456.2417371702084	68.307	0.80339	68.443	68	68.804	0.13522					48	29	2	0	0	0	0.4196	1	6117	6117		24.203	10.427	1	80629			1696	2826;3976	1137	1138	2041	2041					0.007286489287935183
ALWNPVSL	8	Unmodified	_ALWNPVSL_					0	0	0		nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1;ENSG00000131149|ENST00000253458|GSE1	nc|ENSG00000131149|Q14687-2|GSE1	nc|ENSG00000131149|Q14687-2|GSE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2742004394531	2	450.252903	898.491253	1.327	0.00059751	3.1338	0.001411	4.4609	0.0020085	450.2538246447936	93.167	0.73981	93.213	92.795	93.535	0.045448					32	17	3	0	0	0	0.4196	1	9761	9761		30.504	0	1	291350			1697	3718	1138	1139	2042	2042					0.03794703731375648
ALWYRKTNLFL	11	Unmodified	_ALWYRKTNLFL_					0	0	0		ENST00000466194.1_1_1:26801759-26802014:+|nuORF	ENST00000466194.1_1_1:26801759-26802014:+|nuORF	ENST00000466194.1_1_1:26801759-26802014:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.6082458496094	3	475.606478	1423.79761	0.65792	0.00031291	3.7649	0.0017906	4.4229	0.0021035	475.60800202742337	50.088	0.53911	50.535	50.266	50.805	0.44761					31	12	3	0	0	0	0.74405	1	4915	4915		23.378	2.5408	1	1184700			1698	12127	1139	1140	2043	2043					0.1026588917366098
ALYDATYETK	10	Unmodified	_ALYDATYETK_					0	0	0		ENSG00000172757|ENST00000308162|CFL1;nc|ENSG00000165410|Q9Y281-3|CFL2;ENSG00000165410|ENST00000298159|CFL2;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;ENST00000508046.1_1_5:68609355-68609532:-|nuORF	ENSG00000172757|ENST00000308162|CFL1	ENSG00000172757|ENST00000308162|CFL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.7822875976562	2	587.784961	1173.55537	-1.5011	-0.00088235	-0.46988	-0.00027619	-1.971	-0.0011585	587.78449991227	43.736	0.44906	44.51	44.343	44.792	0.7738					19	10	3	0	0	0	0.40664	1	3995	3995		63.534	27.087	1	370540			1699	6791	1140	1141	2044	2044					-0.024466056930350533
ALYDATYETK	10	Unmodified	_ALYDATYETK_					0	0	0		ENSG00000172757|ENST00000308162|CFL1;nc|ENSG00000165410|Q9Y281-3|CFL2;ENSG00000165410|ENST00000298159|CFL2;ENST00000530945.1_1_11:65623404-65625570:-|nuORF;ENST00000508046.1_1_5:68609355-68609532:-|nuORF	ENSG00000172757|ENST00000308162|CFL1	ENSG00000172757|ENST00000308162|CFL1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	587.784961	1173.55537	-1.1691	-0.0006872	-0.87659	-0.00051524	-2.0457	-0.0012024	587.784282191929	43.999	0.36872	44.45	44.281	44.649	0.45025	-0.030324	-0.00016517	NaN	63.534	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	422340			1700	6791	1140	1141							-0.024466056930350533
ALYLAIKS	8	Unmodified	_ALYLAIKS_					0	0	0		ENSG00000206557|ENST00000383763|TRIM71	ENSG00000206557|ENST00000383763|TRIM71	ENSG00000206557|ENST00000383763|TRIM71	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	439.7705993652344	2	439.770929	877.527304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.059	1	62.18	61.68	62.68	0.1209								0	0	0	0.30478	1	5409	5409		17.365	0	1				1701	8561	1141	1142	2045	2045					0.08364160908240592
ALYWRNNRG	9	Unmodified	_ALYWRNNRG_					0	0	0			REV__ENSG00000136040|ENST00000258526|PLXNC1	REV__ENSG00000136040|ENST00000258526|PLXNC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.2966918945312	2	575.299239	1148.58392	-0.68021	-0.00039132	-2.903	-0.0016701	-3.5832	-0.0020614	575.2974888485829	42.739	0.6573	42.739	42.41	43.067	0.00016785					36	15	3	0	0	0	0.7932	1	3231	3231		24.203	3.2558	1	252980	+		1702	19282	1142	1143	2046	2046					0.015576015174474378
AMAADGLFFQV	11	Unmodified	_AMAADGLFFQV_					0	0	0		ENSG00000099960|ENST00000382932|SLC7A4	ENSG00000099960|ENST00000382932|SLC7A4	ENSG00000099960|ENST00000382932|SLC7A4	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	584.8640747070312	2	585.286617	1168.55868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.135	1	68.135	67.635	68.635	0								0	0	0	0.56276	1	6042	6042		30.318	1.1477	1				1703	1779	1143	1144	2047	2047					-0.018856341199807503
AMAKPNLVP	9	Unmodified	_AMAKPNLVP_					0	0	0		ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7688293457031	2	470.767863	939.521173	-0.0020308	-9.5605E-07	2.67	0.0012569	2.6679	0.001256	470.76898045127206	50.765	1.7665	50.763	50.349	52.115	-0.0020447					99	47	3	0	0	0	0.39977	1	4347	4347		57.811	3.035	1	678630			1704	9768	1144	1145	2048	2048					0.048993194050581224
AMAKPNLVP	9	Unmodified	_AMAKPNLVP_					0	0	0		ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7688903808594	2	470.767863	939.521173	-0.039118	-1.8416E-05	2.4696	0.0011626	2.4305	0.0011442	470.76888428229023	53.107	1.8265	53.104	52.614	54.44	-0.0033035					119	53	3	0	0	0	0.72402	1	4607	4607		38.806	0	1	1606400			1705	9768	1144	1145	2049	2049					0.048993194050581224
AMAKPNLVP	9	Unmodified	_AMAKPNLVP_					0	0	0		ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.76922607421875	2	470.767863	939.521173	-0.06159	-2.8994E-05	2.8246	0.0013297	2.763	0.0013007	470.7690565543328	55.059	1.681	55.051	54.414	56.095	-0.0077095					114	49	3	0	0	0	0.72402	1	4873	4873		38.806	0	1	1601200			1706	9768	1144	1145	2050	2050					0.048993194050581224
AMAKPNLVP	9	Unmodified	_AMAKPNLVP_					0	0	0		ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.76898193359375	2	470.767863	939.521173	-0.68241	-0.00032125	3.1894	0.0015015	2.507	0.0011802	470.7692716154138	50.88	1.3539	50.856	50.427	51.781	-0.02343					91	38	3	0	0	0	0.58151	2	4398	4398;4446		47.916	8.3025	1	670480			1707	9768	1144	1145	2051;2052	2051					0.048993194050581224
AMAKPNLVP	9	Unmodified	_AMAKPNLVP_					0	0	0		ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7693176269531	2	470.767863	939.521173	-0.93673	-0.00044098	3.3148	0.0015605	2.3781	0.0011195	470.7692759714824	53.261	1.827	53.278	52.753	54.58	0.017487					126	54	3	0	0	0	0.58151	1	4743	4743		47.916	9.1095	1	1396300			1708	9768	1144	1145	2053	2053					0.048993194050581224
AMAKPNLVP	9	Unmodified	_AMAKPNLVP_					0	0	0		ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7694091796875	2	470.767863	939.521173	-1.0178	-0.00047915	3.0761	0.0014481	2.0583	0.00096897	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.69914	1	4419	4419		40.573	3.4135	1	1648400			1709	9768	1144	1145	2054	2054					0.048993194050581224
AMAKPNLVP	9	Unmodified	_AMAKPNLVP_					0	0	0		ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7691345214844	2	470.767863	939.521173	0.3438	0.00016185	1.592	0.00074944	1.9357	0.00091129	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.58151	2	4345	4345;4399		47.916	7.1374	1	1863100			1710	9768	1144	1145	2055;2056	2055					0.048993194050581224
AMAKPNLVP	9	Unmodified	_AMAKPNLVP_					0	0	0		ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	ENST00000297792.9_1_6:18161585-18171663:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7696228027344	2	470.767863	939.521173	-0.45506	-0.00021423	2.8694	0.0013508	2.4143	0.0011366	470.7691067247387	52.317	1.9749	52.984	52.189	54.164	0.6673					112	47	4	0	0	0	0.39977	1	5191	5191		57.811	3.035	1	18701000			1711	9768	1144	1145	2057	2057					0.048993194050581224
AMAPKGAPP	9	Unmodified	_AMAPKGAPP_					0	0	0			REV__ENSG00000130940|ENST00000377022|CASZ1	REV__ENSG00000130940|ENST00000377022|CASZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.22808837890625	2	420.225831	838.437109	2.4843	0.001044	2.4469	0.0010283	4.9312	0.0020722	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.67235	1	8003	8003		42.474	3.6683	1	961790	+		1712	18921	1145	1146	2058	2058					0.01142788308152376
AMAPRAVGR	9	Unmodified	_AMAPRAVGR_					0	0	0			REV__ENSG00000149485|ENST00000350997|FADS1	REV__ENSG00000149485|ENST00000350997|FADS1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.76055908203125	2	464.760904	927.507254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.333	1	78.897	78.397	79.397	0.56332								0	0	0	0.29134	1	8974	8974		34.173	2.2177	1		+		1713	20172	1146	1147	2059	2059					0.04060086696631515
AMETAVIGVVV	11	Unmodified	_AMETAVIGVVV_					0	0	0		nc|ENSG00000235387|A0A1B0GVQ0|SPAAR	nc|ENSG00000235387|A0A1B0GVQ0|SPAAR	nc|ENSG00000235387|A0A1B0GVQ0|SPAAR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	544.8065185546875	2	544.804642	1087.59473	0.15928	8.6776E-05	3.3558	0.0018283	3.5151	0.001915	544.8063612053201	24.541	0.98756	24.642	24.281	25.269	0.10045					123	49	4	0	0	0	0.64498	1	838	838		39.253	1.4413	1	1023100			1714	15273	1147	1148	2060	2060					0.05443823056884867
AMHLAKGCF	9	Unmodified	_AMHLAKGCF_					0	0	0			REV__ENST00000526600.1_1_11:12963207-12963294:+|nuORF	REV__ENST00000526600.1_1_11:12963207-12963294:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.2364501953125	2	489.238415	976.462278	-0.71864	-0.00035159	-3.3907	-0.0016589	-4.1093	-0.0020104	489.2367667655941	86.159	1.8924	86.606	85.945	87.837	0.44736					116	45	5	0	0	0	0.76402	1	10127	10127		35.201	1.7077	1	3138400	+		1715	28214	1148	1149	2061	2061					-0.026894801609159913
AMHPLRSGLLN	11	Unmodified	_AMHPLRSGLLN_					0	0	0		nc|ENSG00000055118|Q12809-5|KCNH2	nc|ENSG00000055118|Q12809-5|KCNH2	nc|ENSG00000055118|Q12809-5|KCNH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3662719726562	2	604.832057	1207.64956	0.90478	0.00054724	-1.0601	-0.0006412	-0.15534	-9.3956E-05	604.8324848652617	104.23	0.20863	104.34	104.15	104.36	0.11685					7	4	2	0	0	0	0.17365	1	11029	11029		17.468	4.014	1	83600			1716	14758	1149	1150	2062	2062					0.05404254648169626
AMKKDPVKK	9	Oxidation (M)	_AM(Oxidation (M))KKDPVKK_		AM(1)KKDPVKK		AM(55)KKDPVKK	0	0	1		nc|ENSG00000197451|Q99729-3|HNRNPAB;nc|ENSG00000197451|Q99729-4|HNRNPAB;nc|ENSG00000197451|Q99729|HNRNPAB;ENSG00000197451|ENST00000358344|HNRNPAB;ENST00000406003.2_1_12:10264431-10264902:+|nuORF	nc|ENSG00000197451|Q99729-3|HNRNPAB	nc|ENSG00000197451|Q99729-3|HNRNPAB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8128051757812	2	530.812802	1059.61105	0.95748	0.00050825	-1.8608	-0.00098774	-0.90332	-0.00047949	530.8116217832264	15.64	0.27984	15.151	15.06	15.34	-0.48917					14	10	2	0	0	0	0.44421	1	32	32		54.776	8.8244	1	98187			1717	8167	1150	1151	2063	2063		141			0.08362949013621801
AMKKDPVKK	9	Unmodified	_AMKKDPVKK_					0	0	0		nc|ENSG00000197451|Q99729-3|HNRNPAB;nc|ENSG00000197451|Q99729-4|HNRNPAB;nc|ENSG00000197451|Q99729|HNRNPAB;ENSG00000197451|ENST00000358344|HNRNPAB;ENST00000406003.2_1_12:10264431-10264902:+|nuORF	nc|ENSG00000197451|Q99729-3|HNRNPAB	nc|ENSG00000197451|Q99729-3|HNRNPAB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.8150024414062	2	522.815344	1043.61614	0.98171	0.00051325	-0.92515	-0.00048368	0.056564	2.9572E-05	522.8148612312101	16.164	0.57083	15.676	15.342	15.913	-0.48719					20	12	3	0	0	0	0.044173	1	96	96		110.12	49.148	1	219450			1718	8167	1150	1152	2064	2064					0.0960725287625337
AMKKDPVKK	9	Unmodified	_AMKKDPVKK_					0	0	0		nc|ENSG00000197451|Q99729-3|HNRNPAB;nc|ENSG00000197451|Q99729-4|HNRNPAB;nc|ENSG00000197451|Q99729|HNRNPAB;ENSG00000197451|ENST00000358344|HNRNPAB;ENST00000406003.2_1_12:10264431-10264902:+|nuORF	nc|ENSG00000197451|Q99729-3|HNRNPAB	nc|ENSG00000197451|Q99729-3|HNRNPAB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.8153076171875	2	522.815344	1043.61614	0.46007	0.00024053	-0.31455	-0.00016445	0.14552	7.6079E-05	522.8149962633219	16.165	0.31777	15.566	15.422	15.74	-0.59873					12	6	3	0	0	0	0.039957	1	94	94		112.41	32.96	1	269260			1719	8167	1150	1152	2065	2065					0.0960725287625337
AMKKGGIF	8	Unmodified	_AMKKGGIF_					0	0	0		nc|ENSG00000104765|O60238-2|BNIP3L;ENSG00000104765|ENST00000380629|BNIP3L	nc|ENSG00000104765|O60238-2|BNIP3L	nc|ENSG00000104765|O60238-2|BNIP3L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.2459716796875	2	426.244024	850.473494	0.61593	0.00026254	4.191	0.0017864	4.8069	0.0020489	426.24572360202285	87.518	4.0945	87.668	85.602	89.696	0.14956					180	96	4	0	0	0	0.86791	1	8666	8666		28.254	1.4582	1	3688500			1720	2146	1151	1153	2066	2066					0.042276652048713004
AMKKLWRRKKD	11	Unmodified	_AMKKLWRRKKD_					0	0	0		ENSG00000171014|ENST00000307033|OR4D5	ENSG00000171014|ENST00000307033|OR4D5	ENSG00000171014|ENST00000307033|OR4D5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.958740234375	3	487.294129	1458.86056	-0.93928	-0.00045771	-0.02102	-1.0243E-05	-0.9603	-0.00046795	487.2940586627321	102.7	1.0572	102.74	101.89	102.94	0.043198					36	25	2	0	0	0	0.18159	1	11118	11118		8.4073	0	1	165650			1721	6632	1152	1154	2067	2067					0.14948131690016453
AMKLSGKLFR	10	Unmodified	_AMKLSGKLFR_					0	0	0			REV__nc|ENSG00000121797|O00421-2|CCRL2	REV__nc|ENSG00000121797|O00421-2|CCRL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.843017578125	2	575.841894	1149.66923	-0.49921	-0.00028747	2.3914	0.0013771	1.8922	0.0010896	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.86348	1	8782	8782		31.53	3.6476	1	1518700	+		1722	29817	1153	1155	2068	2068					0.10038630658914371
AMKPQSVLTRV	11	Unmodified	_AMKPQSVLTRV_					0	0	0		nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1;ENSG00000104067|ENST00000614355|TJP1	nc|ENSG00000104067|Q07157-2|TJP1	nc|ENSG00000104067|Q07157-2|TJP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.3573608398438	2	615.355365	1228.69618	-0.35839	-0.00022054	3.6819	0.0022657	3.3235	0.0020451	615.3576084899992	104.75	2.3818	104.73	104.28	106.66	-0.014809					147	56	4	0	0	0	0.69995	1	11370	11370		31.53	3.4483	1	1933000			1723	2113	1154	1156	2069	2069					0.0909769447941926
AMKRRKLRARW	11	Unmodified	_AMKRRKLRARW_					0	0	0			REV__ENSG00000109920|ENST00000263773|FNBP4	REV__ENSG00000109920|ENST00000263773|FNBP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.3019104003906	3	491.301618	1470.88302	-0.76352	-0.00037512	-4.1052	-0.0020169	-4.8687	-0.002392	491.2995386028914	111.52	0.67294	111.52	111.3	111.98	0					49	24	3	0	0	0	0.81021	1	11617	11617		9.2118	2.5522	1	27267	+		1724	17781	1155	1157	2070	2070					0.16641775878315457
AMKRVDHKL	9	Unmodified	_AMKRVDHKL_					0	0	0		ENSG00000214097|ENST00000397537|SMCO1	ENSG00000214097|ENST00000397537|SMCO1	ENSG00000214097|ENST00000397537|SMCO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.3178100585938	2	549.316043	1096.61753	-0.54476	-0.00029924	3.512	0.0019292	2.9672	0.0016299	549.3179138519522	101.15	1.9875	101.19	100.7	102.69	0.031036					127	47	4	0	0	0	0.7932	1	10810	10810		26.693	5.0072	1	2171100			1725	8617	1156	1158	2071	2071					0.07308886965006423
AMLAWHCLS	9	Unmodified	_AMLAWHCLS_					0	0	0			REV__ENST00000429751.6_1_16:15155497-15155548:-|nuORF	REV__ENST00000429751.6_1_16:15155497-15155548:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3137817382812	2	516.243698	1030.47284	-0.26136	-0.00013493	-3.8181	-0.0019711	-4.0794	-0.002106	516.2418308025622	98.86	0.33493	99.083	98.833	99.168	0.22263					10	7	2	0	0	0	0.20789	1	10276	10276		33.516	0	1	73476	+		1726	26593	1157	1159	2072	2072					-0.041174975064905084
AMLKLGELL	9	Unmodified	_AMLKLGELL_					0	0	0			REV__ENSG00000124177|ENST00000373233|CHD6	REV__ENSG00000124177|ENST00000373233|CHD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.30084228515625	2	494.298996	986.583439	2.3073	0.0011405	1.1641	0.0005754	3.4713	0.0017159	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.77546	1	10666	10666		31.955	1.4512	1	53958000	+		1727	18564	1158	1160	2073	2073					0.08961045753414965
AMLLRHVVI	9	Unmodified	_AMLLRHVVI_					0	0	0			REV__nc|ENSG00000166938|Q8TF46-2|DIS3L	REV__nc|ENSG00000166938|Q8TF46-2|DIS3L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3258056640625	2	526.325879	1050.63721	0.4429	0.00023311	-2.5073	-0.0013196	-2.0644	-0.0010865	526.3244429703017	58.009	1.7686	58.119	57.259	59.028	0.11027					159	84	2	0	0	0	0.7932	1	4850	4850		25.45	5.4534	1	230600	+		1728	21341	1159	1161	2074	2074					0.11391262975757854
AMLVNILPS	9	Unmodified	_AMLVNILPS_					0	0	0			REV__ENSG00000205496|ENST00000380371|OR51A2;REV__ENSG00000205497|ENST00000641898|OR51A4	REV__ENSG00000205496|ENST00000380371|OR51A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27752685546875	2	479.275521	956.536489	0.61468	0.0002946	3.1717	0.0015201	3.7864	0.0018147	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.76255	1	7895	7895		35.618	4.0885	1	1802300	+		1729	23561;23562	1160	1162	2075	2075					0.05648186202256511
AMMFADDASLK	11	Oxidation (M)	_AM(Oxidation (M))MFADDASLK_		AM(0.944)M(0.056)FADDASLK		AM(12)M(-12)FADDASLK	0	0	1			REV__ENSG00000173376|ENST00000379692|NDNF	REV__ENSG00000173376|ENST00000379692|NDNF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.2705078125	2	608.272849	1214.53115	-0.44302	-0.00026948	-0.15793	-9.6066E-05	-0.60096	-0.00036555	608.2726380221598	67.152	0.5586	67.168	66.965	67.524	0.016197					52	24	3	0	0	0	0.62614	1	6322	6322		41.427	9.7923	2	127700	+		1730	21918	1161	1163	2076	2076		330			-0.06753905442565156
AMMIGRSFY	9	Oxidation (M)	_AM(Oxidation (M))MIGRSFY_		AM(0.999)M(0.001)IGRSFY		AM(31)M(-31)IGRSFY	0	0	1			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2586059570312	2	546.254262	1090.49397	-0.7007	-0.00038276	3.4455	0.0018821	2.7448	0.0014994	546.2566964393708	59.557	1.7236	60.11	59.536	61.26	0.55323					92	45	4	0	0	0	0.0092756	3	6334	6285;6297;6334		133.81	54.362	2	4076000	+		1731	23145	1162	1164	2077;2078;2079	2079		352			-0.04765532197620814
AMNRVLTP	8	Unmodified	_AMNRVLTP_					0	0	0			REV__ENSG00000197208|ENST00000200652|SLC22A4	REV__ENSG00000197208|ENST00000200652|SLC22A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.2483825683594	2	451.249837	900.485122	-0.14168	-6.3933E-05	-1.9647	-0.00088658	-2.1064	-0.00095051	451.2488328539834	65.707	0.84668	65.718	65.246	66.093	0.010452					75	44	3	0	0	0	0.84341	1	6177	6177		24.203	2.2429	1	804770	+		1732	23208	1163	1165	2080	2080					0.0308986222820522
AMPALAPPE	9	Unmodified	_AMPALAPPE_					0	0	0		ENST00000455094.1_1_6:30454046-30454364:+|nuORF;ENSG00000132341|ENST00000543796|RAN	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.30816650390625	2	448.730946	895.447339	0.04675	2.0978E-05	-0.10785	-4.8397E-05	-0.061103	-2.7419E-05	448.7310975512093	79.962	0.54652	80.488	80.275	80.822	0.52676					18	12	2	0	0	0	0.20789	1	9174	9174		40.573	5.3719	1	153170			1733	3784	1164	1166	2081	2081					-0.004566487572674305
AMRGASRG	8	Unmodified	_AMRGASRG_					0	0	0		ENST00000252699.6_1_19:39220380-39220722:+|nuORF	ENST00000252699.6_1_19:39220380-39220722:+|nuORF	ENST00000252699.6_1_19:39220380-39220722:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.20880126953125	2	403.208504	804.402455	-1.8542	-0.00074762	3.2893	0.0013263	1.4351	0.00057864	403.2097445210388	85.667	2.0538	85.825	85.416	87.47	0.15851					103	47	4	0	0	0	0.8347	1	8382	8382		23.042	1.3402	1	1256500			1734	9311	1165	1167	2082	2082					-0.007570347799287447
AMRILGGV	8	Unmodified	_AMRILGGV_					0	0	0		ENSG00000126247|ENST00000246533|CAPNS1	ENSG00000126247|ENST00000246533|CAPNS1	ENSG00000126247|ENST00000246533|CAPNS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.7392883300781	2	408.741648	815.468743	-1.0833	-0.00044277	-3.5311	-0.0014433	-4.6144	-0.0018861	408.74010288341543	37.409	2.2746	37.356	36.961	39.236	-0.053558					112	51	3	0	0	0	0.89457	1	2653	2653		37.028	1.8278	1	289290			1735	3449	1166	1168	2083	2083					0.053627810621151184
AMSSGGSSK	9	Unmodified	_AMSSGGSSK_					0	0	0		ENST00000609672.5_3_X:64808305-64808455:+|nuORF	ENST00000609672.5_3_X:64808305-64808455:+|nuORF	ENST00000609672.5_3_X:64808305-64808455:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.1825866699219	2	406.18436	810.354167	0.058799	2.3883E-05	-3.7248	-0.001513	-3.666	-0.0014891	406.18265058514055	25.838	0.93217	25.944	25.442	26.374	0.1054					58	44	2	0	0	0	0.7932	1	962	962		25.574	0.12388	1	53576			1736	14487	1167	1169	2084	2084					-0.058595732104890885
AMTNSTIH	8	Unmodified	_AMTNSTIH_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7093505859375	2	437.708002	873.401452	0.2226	9.7435E-05	2.884	0.0012624	3.1066	0.0013598	437.70928815941755	84.049	0.9811	84.505	83.979	84.961	0.45556					54	23	4	0	0	0	0.90465	1	9805	9805		40.573	1.7665	1	925950	+		1737	17348	1168	1170	2085	2085					-0.04031293939488023
AMVIGLILTT	10	Unmodified	_AMVIGLILTT_					0	0	0			REV__ENSG00000169507|ENST00000685975|SLC38A11	REV__ENSG00000169507|ENST00000685975|SLC38A11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3141479492188	2	516.312103	1030.60965	-0.047196	-2.4368E-05	3.3567	0.0017331	3.3095	0.0017087	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.86305	1	10809	10809		31.955	1.4512	1	63062000	+		1738	21582	1169	1171	2086	2086					0.09557314924882121
AMVIGLILTT	10	Unmodified	_AMVIGLILTT_					0	0	0			REV__ENSG00000169507|ENST00000685975|SLC38A11	REV__ENSG00000169507|ENST00000685975|SLC38A11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3138427734375	2	516.312103	1030.60965	1.791	0.00092474	1.8914	0.00097654	3.6824	0.0019013	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.86305	1	11988	11988		31.955	2.8053	1	24820000	+		1739	21582	1169	1171	2087	2087					0.09557314924882121
AMVLNATKVFK	11	Unmodified	_AMVLNATKVFK_					0	0	0		ENST00000485134.1_1_1:158911778-158914889:+|nuORF;nc|ENSG00000163564|Q6K0P9-4|PYHIN1;nc|ENSG00000163564|Q6K0P9-3|PYHIN1;nc|ENSG00000163564|Q6K0P9-2|PYHIN1;ENSG00000163564|ENST00000368140|PYHIN1	ENST00000485134.1_1_1:158911778-158914889:+|nuORF	ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.355712890625	2	611.354834	1220.69511	0.21646	0.00013233	2.3298	0.0014243	2.5463	0.0015567	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.70737	1	10097	10097		30.318	4.7437	1	12399000			1740	5826	1170	1172	2088	2088					0.09359480110515506
AMYDKGPFRSK	11	Unmodified	_AMYDKGPFRSK_					0	0	0		ENSG00000181019|ENST00000320623|NQO1	ENSG00000181019|ENST00000320623|NQO1	ENSG00000181019|ENST00000320623|NQO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.888671875	3	433.888657	1298.64414	-0.57204	-0.0002482	0.79493	0.00034491	0.22288	9.6706E-05	433.88884749146075	31.816	1.1169	31.942	31.3	32.417	0.12643					42	25	2	0	0	0	0.69071	1	2188	2188		33.039	0.28887	1	278180			1741	7368	1171	1173	2089	2089					0.006765310656646761
AMYDKGPFRSK	11	Unmodified	_AMYDKGPFRSK_					0	0	0		ENSG00000181019|ENST00000320623|NQO1	ENSG00000181019|ENST00000320623|NQO1	ENSG00000181019|ENST00000320623|NQO1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	433.888657	1298.64414	0.06858	2.9756E-05	-3.0002	-0.0013017	-2.9316	-0.001272	433.8878948486516	31.945	0.40321	31.956	31.764	32.167	0.0109	0.048644	-0.0037446	NaN	33.039	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33141			1742	7368	1171	1173							0.006765310656646761
AMYFAWLGF	9	Unmodified	_AMYFAWLGF_					0	0	0		ENSG00000074855|ENST00000159087|ANO8;nc|ENSG00000074855|Q9HCE9-2|ANO8	ENSG00000074855|ENST00000159087|ANO8	ENSG00000074855|ENST00000159087|ANO8	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.8268432617188	2	553.262413	1104.51027	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.16	1	65.286	64.786	65.786	0.12545								0	0	0	0.30219	1	5770	5770		29.842	5.6388	1				1743	1316	1172	1174	2090	2090					-0.03780082969228715
ANALAHKYH	9	Unmodified	_ANALAHKYH_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.7693481445312	2	512.769783	1023.52501	0.31103	0.00015949	-0.11926	-6.1153E-05	0.19177	9.8336E-05	512.7694620417714	30.122	0.60137	30.147	29.882	30.483	0.025013					36	14	3	0	0	0	0.22631	3	1536	1528;1536;1555		71.296	21.854	1	151100			1744	8826	1173	1175	2091;2092;2093	2092					0.014191252231285034
ANALAHKYH	9	Unmodified	_ANALAHKYH_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.76953125	2	512.769783	1023.52501	0.1162	5.9582E-05	-0.4366	-0.00022388	-0.32041	-0.00016429	512.7692913700915	49.157	1.1049	49.152	48.693	49.798	-0.0056419					48	24	3	0	0	0	0.17307	2	4105	4096;4105		79.451	24.729	1	252440			1745	8826	1173	1175	2094;2095	2095					0.014191252231285034
ANALAHKYH	9	Unmodified	_ANALAHKYH_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.7689819335938	2	512.769783	1023.52501	-0.0082937	-4.2528E-06	0.1544	7.9172E-05	0.14611	7.4919E-05	512.7695513621228	30.134	0.87141	30.091	29.824	30.696	-0.043095					46	20	4	0	0	0	0.22631	1	1623	1623		71.296	18.359	1	166890			1746	8826	1173	1175	2096	2096					0.014191252231285034
ANALAHKYH	9	Unmodified	_ANALAHKYH_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.7691650390625	2	512.769783	1023.52501	-0.46864	-0.0002403	0.39629	0.0002032	-0.072355	-3.7101E-05	512.7695295082201	49.164	0.97045	49.14	48.751	49.721	-0.024029					41	21	3	0	0	0	0.17307	2	4191	4191;4203		79.451	16.595	1	170240			1747	8826	1173	1175	2097;2098	2097					0.014191252231285034
ANALAHKYH	9	Unmodified	_ANALAHKYH_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.7698974609375	2	512.769783	1023.52501	0.15873	8.1392E-05	-0.26285	-0.00013478	-0.10412	-5.3389E-05	512.76945041	30.19	0.77853	30.175	29.843	30.622	-0.015167					37	18	3	0	0	0	0.073112	1	1566	1566		99.375	43.871	1	129150			1748	8826	1173	1175	2099	2099					0.014191252231285034
ANALAHKYH	9	Unmodified	_ANALAHKYH_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	512.769783	1023.52501	-0.77112	-0.00039541	0.93718	0.00048056	0.16606	8.5152E-05	512.7698627694293	30.229	0.4864	30.257	30.052	30.538	0.028618	0.042341	0.0011187	NaN	99.375	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91589			1749	8826	1173	1175							0.014191252231285034
ANALAHKYH	9	Unmodified	_ANALAHKYH_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	512.769783	1023.52501	0.51605	0.00026461	-1.7048	-0.00087416	-1.1887	-0.00060955	512.7690403866956	30.402	0.3061	30.406	30.185	30.491	0.0037212	0.19047	-0.0015907	NaN	99.375	12	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99801			1750	8826	1173	1175							0.014191252231285034
ANASMRNTDEQ	11	Unmodified	_ANASMRNTDEQ_					0	0	0			REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.7649536132812	2	618.767308	1235.52006	-0.24876	-0.00015393	-2.4844	-0.0015372	-2.7331	-0.0016912	618.7657540181829	31.683	0.63522	31.677	31.311	31.946	-0.0061474					30	14	3	0	0	0	0.62614	1	1753	1753		41.427	7.2541	1	133270	+		1751	16532	1174	1176	2100	2100					-0.08827591492467945
ANASMRNTDEQ	11	Unmodified	_ANASMRNTDEQ_					0	0	0			REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	618.767308	1235.52006	1.131	0.00069985	-4.0045	-0.0024778	-2.8734	-0.001778	618.7648471218474	31.832	0.36278	31.89	31.644	32.007	0.058317	0.17262	-0.00086572	NaN	41.427	22	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121650	+		1752	16532	1174	1176							-0.08827591492467945
ANASMRNTDEQ	11	Unmodified	_ANASMRNTDEQ_					0	0	0			REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	618.767308	1235.52006	0.29214	0.00018077	-4.4587	-0.0027589	-4.1666	-0.0025782	619.2678124388807	31.303	0.099937	31.415	31.332	31.432	0.11198	-0.30259	-0.0014279	NaN	41.427	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50523	+		1753	16532	1174	1176							-0.08827591492467945
ANASMRNTDEQ	11	Unmodified	_ANASMRNTDEQ_					0	0	0			REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	618.767308	1235.52006	-0.11604	-7.1804E-05	-3.2841	-0.0020321	-3.4002	-0.0021039	618.7652361210185	31.755	0.33919	31.835	31.644	31.983	0.079834	0.11781	2.5702E-05	NaN	41.427	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97506	+		1754	16532	1174	1176							-0.08827591492467945
ANASMRNTDEQ	11	Unmodified	_ANASMRNTDEQ_					0	0	0			REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	618.767308	1235.52006	1.037	0.00064167	-4.3809	-0.0027107	-3.3439	-0.0020691	618.7646120177297	31.759	0.34164	31.866	31.675	32.016	0.10707	0.14842	-0.0013315	NaN	41.427	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121400	+		1755	16532	1174	1176							-0.08827591492467945
ANATKKHN	8	Unmodified	_ANATKKHN_					0	0	0			REV__ENST00000565120.1_1_17:42015742-42016079:+|nuORF	REV__ENST00000565120.1_1_17:42015742-42016079:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.24072265625	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.93293	1	7746	7746		51.335	3.6781	1	1219900	+		1756	28848	1175	1177	2101	2101					0.021228632976999506
ANCIVLALE	9	Unmodified	_ANCIVLALE_					0	0	0		nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;ENSG00000141837|ENST00000360228|CACNA1A;ENST00000533229.1_1_1:181452799-181620578:+|nuORF;ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000198216|Q15878-2|CACNA1E;nc|ENSG00000198216|Q15878-3|CACNA1E;ENSG00000198216|ENST00000367573|CACNA1E;nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000141837|O00555-5|CACNA1A;ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000198216|Q15878-2|CACNA1E;nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.2589111328125	2	473.257328	944.500103	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.496	1	50.494	49.994	50.994	-0.0020447								0	0	0	0.35186	1	4279	4279		47.916	3.7988	1				1757	14984;4960;4530;8256	1176	1178	2102	2102					0.02563309305526218
ANDIELII	8	Unmodified	_ANDIELII_					0	0	0			REV__CON__P08730-1	REV__CON__P08730-1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.75433349609375	2	450.755475	899.496398	0.58167	0.00026219	-3.5127	-0.0015834	-2.9311	-0.0013212	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.87479	1	7788	7788		30.504	1.3541	1	285810	+	+	1758	15981	1177	1179	2103	2103					0.04262962803340997
ANDPHDPIV	9	Unmodified	_ANDPHDPIV_					0	0	0		ENSG00000166938|ENST00000319212|DIS3L;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L	ENSG00000166938|ENST00000319212|DIS3L	ENSG00000166938|ENST00000319212|DIS3L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.23724365234375	2	489.237981	976.461409	-0.77305	-0.00037821	-2.5786	-0.0012615	-3.3516	-0.0016398	489.23682963313604	63.081	1.9408	63.104	62.828	64.768	0.022984					241	80	5	0	0	0	0.78058	1	5652	5652		30.504	1.3541	1	3852300			1759	6250	1178	1180	2104	2104					-0.02776280004616183
ANEEQHGGH	9	Unmodified	_ANEEQHGGH_					0	0	0			REV__ENST00000344824.10_2_19:16178370-16178520:+|nuORF	REV__ENST00000344824.10_2_19:16178370-16178520:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.7069396972656	2	489.704837	977.395121	-0.010641	-5.2108E-06	2.2746	0.0011139	2.2639	0.0011087	489.7065332968669	94.543	0.77744	94.979	94.709	95.487	0.43539					36	18	3	0	0	0	0.38563	1	11350	11350		58.782	25.266	1	463900	+		1760	25308	1179	1181	2105	2105					-0.09448095846664728
ANGPIIGEM	9	Unmodified	_ANGPIIGEM_					0	0	0			REV__nc|ENSG00000013016|Q9NZN3-2|EHD3	REV__nc|ENSG00000013016|Q9NZN3-2|EHD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.7780456542969	2	451.226028	900.437503	1.3852	0.00062503	-3.9118	-0.0017651	-2.5266	-0.0011401	451.2250199364922	27.57	0.50903	27.316	27.078	27.587	-0.25465					25	11	3	0	0	0	0.20789	1	1588	1588		23.042	0	1	59737	+		1761	16192	1180	1182	2106	2106					-0.016698367626418076
ANGQLFILGI	10	Unmodified	_ANGQLFILGI_					0	0	0			REV__ENSG00000008283|ENST00000360793|CYB561	REV__ENSG00000008283|ENST00000360793|CYB561	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.305667	1044.59678	-0.041393	-2.1661E-05	-4.0495	-0.0021191	-4.0909	-0.0021408	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.71042	2	8782	8782;8829		44.117	5.3107	1	3850300	+		1762	16132	1181	1183	2107;2108	2107					0.0762661985700106
ANGQLFILGI	10	Unmodified	_ANGQLFILGI_					0	0	0			REV__ENSG00000008283|ENST00000360793|CYB561	REV__ENSG00000008283|ENST00000360793|CYB561	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3033447265625	2	523.305667	1044.59678	-0.178	-9.3149E-05	-4.0857	-0.0021381	-4.2637	-0.0022312	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.85934	1	8585	8585		35.618	1.6967	1	4158500	+		1763	16132	1181	1183	2109	2109					0.0762661985700106
ANGQLFILGI	10	Unmodified	_ANGQLFILGI_					0	0	0			REV__ENSG00000008283|ENST00000360793|CYB561	REV__ENSG00000008283|ENST00000360793|CYB561	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3034057617188	2	523.305667	1044.59678	-1.0823	-0.0005664	-2.8643	-0.0014989	-3.9466	-0.0020653	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.85934	1	10546	10546		35.618	3.6634	1	13160000	+		1764	16132	1181	1183	2110	2110					0.0762661985700106
ANISQSHKD	9	Unmodified	_ANISQSHKD_					0	0	0		ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.2491149902344	2	500.246338	998.478122	0.40098	0.00020059	-0.73816	-0.00036926	-0.33719	-0.00016868	500.24573835289385	28.587	0.57655	28.623	28.367	28.944	0.03607					28	19	2	0	0	0	0.7932	1	1373	1373		25.574	0	1	39891			1765	8626	1182	1184	2111	2111					-0.0211777911866875
ANKILHQH	8	Unmodified	_ANKILHQH_					0	0	0		nc|ENSG00000138119|Q9NZM1-5|MYOF;nc|ENSG00000138119|Q9NZM1-2|MYOF;nc|ENSG00000138119|Q9NZM1-6|MYOF;nc|ENSG00000138119|Q9NZM1-3|MYOF;ENSG00000138119|ENST00000359263|MYOF;ENST00000485212.1_1_10:95084294-95089482:-|nuORF	nc|ENSG00000138119|Q9NZM1-5|MYOF	nc|ENSG00000138119|Q9NZM1-5|MYOF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.7711486816406	2	480.772326	959.530098	0.24382	0.00011722	-1.3425	-0.00064542	-1.0986	-0.0005282	480.7714939481177	40.905	0.58658	40.986	40.702	41.288	0.081345					34	21	2	0	0	0	0.90465	1	2637	2637		40.573	3.5441	1	275580			1766	4274	1183	1185	2112	2112					0.04871429085744694
ANKKDLRSD	9	Unmodified	_ANKKDLRSD_					0	0	0		ENSG00000143878|ENST00000272233|RHOB	ENSG00000143878|ENST00000272233|RHOB	ENSG00000143878|ENST00000272233|RHOB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.783087	1045.55162	0.71133	0.00037258	1.5692	0.00082191	2.2805	0.0011945	523.7838807073892	88.348	0.99855	88.499	87.683	88.682	0.15055					36	23	2	0	0	0	0.20789	1	8738	8738		27.882	16.371	1	132030			1767	4672	1184	1186	2113	2113					0.030667693238001448
ANKLNQVPILR	11	Unmodified	_ANKLNQVPILR_					0	0	0		nc|ENSG00000145734|A6H8Y1-7|BDP1;nc|ENSG00000145734|A6H8Y1-6|BDP1;ENSG00000145734|ENST00000358731|BDP1;nc|ENSG00000145734|A6H8Y1-2|BDP1;ENST00000508917.6_1_5:70751704-70841064:+|nuORF;nc|ENSG00000145734|A6H8Y1-5|BDP1;ENST00000508157.3_1_5:70790975-70807035:+|nuORF;nc|ENSG00000145734|A6H8Y1-4|BDP1;nc|ENSG00000145734|A6H8Y1-3|BDP1	nc|ENSG00000145734|A6H8Y1-7|BDP1	nc|ENSG00000145734|A6H8Y1-7|BDP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.3839721679688	2	633.388054	1264.76155	-0.65878	-0.00041726	-3.6646	-0.0023211	-4.3234	-0.0027384	633.3855323611931	51.152	1.3899	51.128	50.512	51.902	-0.02343					67	39	2	0	0	0	0.72374	1	4506	4506		18.262	2.6203	1	102910			1768	4789	1185	1187	2114	2114					0.13976431996798055
ANLFFLEVTTK	11	Unmodified	_ANLFFLEVTTK_					0	0	0			REV__ENSG00000114541|ENST00000398540|FRMD4B	REV__ENSG00000114541|ENST00000398540|FRMD4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3616333007812	2	641.855721	1281.69689	1.7061	0.001095	4.3829	0.0028132	6.089	0.0039082	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.7144	1	12998	12998		29.17	2.4771	1	27133000	+		1769	18053	1186	1188	2115	2115					0.06730812400110153
ANLLKANGP	9	Unmodified	_ANLLKANGP_					0	0	0			REV__ENST00000606788.5_1_20:44518901-44519711:+|nuORF	REV__ENST00000606788.5_1_20:44518901-44519711:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.26055908203125	2	449.261259	896.507966	-0.031705	-1.4244E-05	-1.4161	-0.00063622	-1.4478	-0.00065046	449.26046135217877	71.325	1.0336	71.873	71.284	72.317	0.54756					58	24	3	0	0	0	0.7932	1	7937	7937		24.203	0	1	1233100	+		1770	29375	1187	1189	2116	2116					0.055572046173210765
ANLQAQKLKSN	11	Unmodified	_ANLQAQKLKSN_					0	0	0		nc|ENSG00000151892|P56159-2|GFRA1;ENSG00000151892|ENST00000355422|GFRA1	nc|ENSG00000151892|P56159-2|GFRA1	nc|ENSG00000151892|P56159-2|GFRA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5656433105469	3	405.566571	1213.67788	-1.5366	-0.00062318	-2.7212	-0.0011036	-4.2578	-0.0017268	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.73277	1	5613	5613		25.892	0.82393	1	187890			1771	5148	1188	1190	2117	2117					0.0795927582908007
ANLRLTLSSA	10	Unmodified	_ANLRLTLSSA_					0	0	0		nc|ENSG00000075702|O43379|WDR62;ENSG00000075702|ENST00000401500|WDR62	nc|ENSG00000075702|O43379|WDR62	nc|ENSG00000075702|O43379|WDR62	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3032836914062	2	523.303655	1044.59276	1.4247	0.00074556	-1.721	-0.00090062	-0.29632	-0.00015507	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.86471	1	9066	9066		30.318	2.4355	1	3882100			1772	1341	1189	1191	2118	2118					0.07224530363305348
ANLVSKKYIVF	11	Unmodified	_ANLVSKKYIVF_					0	0	0			REV__nc|ENSG00000134249|Q9UKF2-2|ADAM30	REV__nc|ENSG00000134249|Q9UKF2-2|ADAM30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.3831787109375	2	641.381906	1280.74926	2.7088	0.0017374	1.2627	0.00080988	3.9716	0.0025473	641.3824552667398	102.77	1.4212	102.72	102.34	103.76	-0.046997					84	34	4	0	0	0	0.66929	1	11260	11260		36.447	0	1	1908400	+		1773	19124	1190	1192	2119	2119					0.12011395533727409
ANNLSFPLEP	10	Unmodified	_ANNLSFPLEP_					0	0	0		nc|ENSG00000108100|Q8ND76-3|CCNY;nc|ENSG00000108100|Q8ND76-2|CCNY;ENSG00000108100|ENST00000374704|CCNY	nc|ENSG00000108100|Q8ND76-3|CCNY	nc|ENSG00000108100|Q8ND76-3|CCNY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.2835693359375	2	551.282389	1100.55022	0.77804	0.00042892	2.4216	0.001335	3.1997	0.0017639	551.2835921377737	60.477	1.0057	60.445	59.982	60.987	-0.03223					48	28	2	0	0	0	0.54701	1	5756	5756		52.937	0	1	132690			1774	2394	1191	1193	2120	2120					0.003971352350617963
ANPDQKKSK	9	Unmodified	_ANPDQKKSK_					0	0	0			REV__nc|ENSG00000148835|Q15542-2|TAF5	REV__nc|ENSG00000148835|Q15542-2|TAF5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.28240966796875	2	508.28018	1014.54581	-0.0026912	-1.3679E-06	3.9883	0.0020272	3.9857	0.0020258	508.282055825422	21.65	0.96109	21.593	21.341	22.302	-0.057203					83	38	3	0	0	0	0.33718	1	621	621		62.107	3.3255	1	252740	+		1775	20140	1192	1194	2121	2121					0.039116708121468946
ANPKESGRLVE	11	Unmodified	_ANPKESGRLVE_					0	0	0		ENST00000393094.6_1_11:107879697-107879871:+|nuORF	ENST00000393094.6_1_11:107879697-107879871:+|nuORF	ENST00000393094.6_1_11:107879697-107879871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	600.323486328125	2	600.322576	1198.6306	3.2593	0.0019566	-1.3318	-0.00079952	1.9274	0.0011571	600.3216126915729	110.56	1.6446	110.54	110.28	111.92	-0.027641					135	53	3	0	0	0	0.7144	1	12337	12337		29.17	3.596	1	1767300			1776	11039	1193	1195	2122	2122					0.03922996558071645
ANPKKKCVYP	10	Unmodified	_ANPKKKCVYP_					0	0	0			REV__ENSG00000011028|ENST00000303375|MRC2	REV__ENSG00000011028|ENST00000303375|MRC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3187866210938	2	574.318251	1146.62195	-1.3729	-0.0007885	3.5235	0.0020236	2.1506	0.0012351	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.80179	1	9622	9622		39.253	6.4404	1	1586900	+		1777	16174	1194	1196	2123	2123					0.05450351387912633
ANPLKHSIKR	10	Unmodified	_ANPLKHSIKR_					0	0	0			REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|59|2|sense	REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|59|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.353515625	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.8545	1	10766	10766		36.447	4.9169	1	61091000	+		1778	29490	1195	1197	2124	2124					0.11863607136797327
ANPLKHSIKR	10	Unmodified	_ANPLKHSIKR_					0	0	0			REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|59|2|sense	REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|59|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353759765625	2	582.354014	1162.69348	3.1803	0.0018521	-4.2471	-0.0024733	-1.0667	-0.00062122	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.86225	1	11330	11330		32.751	2.2469	1	77008000	+		1779	29490	1195	1197	2125	2125					0.11863607136797327
ANPLLRIF	8	Unmodified	_ANPLLRIF_					0	0	0		nc|ENSG00000124171|Q9BYG5-2|PARD6B;ENSG00000124171|ENST00000371610|PARD6B	nc|ENSG00000124171|Q9BYG5-2|PARD6B	nc|ENSG00000124171|Q9BYG5-2|PARD6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28765869140625	2	472.28982	942.565087	-1.7052	-0.00080534	-2.46	-0.0011618	-4.1652	-0.0019672	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.86288	1	12885	12885		26.796	2.2921	1	3080300			1780	3310	1196	1198	2126	2126					0.09150671893689832
ANPNHITYLL	10	Unmodified	_ANPNHITYLL_					0	0	0			REV__ENSG00000203837|ENST00000369230|PNLIPRP3	REV__ENSG00000203837|ENST00000369230|PNLIPRP3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3106079101562	2	578.31148	1154.60841	-0.30541	-0.00017662	-1.2607	-0.00072908	-1.5661	-0.0009057	578.3105993918314	110.37	1.6265	110.37	110.02	111.65	0					155	51	5	0	0	0	0.86348	1	11453	11453		31.53	7.0106	1	2787700	+		1781	23440	1197	1199	2127	2127					0.037288168803115695
ANPNVRDMY	9	Unmodified	_ANPNVRDMY_					0	0	0		ENSG00000181626|ENST00000587848|ANKRD62	ENSG00000181626|ENST00000587848|ANKRD62	ENSG00000181626|ENST00000587848|ANKRD62	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.2710571289062	2	540.250566	1078.48658	-0.83706	-0.00045222	-3.3791	-0.0018256	-4.2162	-0.0022778	540.2487993199784	82.761	0.5323	83.192	82.962	83.495	0.43108					18	12	2	0	0	0	0.20789	1	9550	9550		54.776	26.894	1	257700			1782	7396	1198	1200	2128	2128					-0.04952548473693241
ANPRKWMLPKL	11	Unmodified	_ANPRKWMLPKL_					0	0	0			REV__ENST00000518382.1_2_8:48887414-48887465:+|nuORF	REV__ENST00000518382.1_2_8:48887414-48887465:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.2662658691406	3	451.932309	1352.7751	1.2214	0.000552	-0.42897	-0.00019387	0.79246	0.00035814	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.76579	1	10729	10729		18.531	0.69791	1	1043200	+		1783	28063	1199	1201	2129	2129					0.112819665043844
ANPRKWMLPKL	11	Unmodified	_ANPRKWMLPKL_					0	0	0			REV__ENST00000518382.1_2_8:48887414-48887465:+|nuORF	REV__ENST00000518382.1_2_8:48887414-48887465:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.9335632324219	3	451.932309	1352.7751	0.82688	0.0003737	-0.0088081	-3.9807E-06	0.81808	0.00036972	451.9322387117762	100.27	1.763	100.6	99.729	101.49	0.33295					121	44	4	0	0	0	0.74405	1	12169	12169		23.378	2.5408	1	816050	+		1784	28063	1199	1201	2130	2130					0.112819665043844
ANPSAMSTTAK	11	Unmodified	_ANPSAMSTTAK_					0	0	0		ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.765625	2	539.763506	1077.51246	1.2854	0.0006938	-1.0391	-0.00056089	0.24625	0.00013292	539.7629593423914	82.004	0.69088	81.942	81.681	82.372	-0.062935					29	15	3	0	0	0	0.60687	1	8286	8286		43.651	4.398	1	130390			1785	8529	1200	1202	2131	2131					-0.02319699022086752
ANQALQEY	8	Unmodified	_ANQALQEY_					0	0	0		ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.7231750488281	2	468.724707	935.43486	-1.001	-0.0004692	-2.092	-0.00098057	-3.093	-0.0014498	468.7237111234843	78.023	1.0772	78.15	77.878	78.955	0.12695					84	33	4	0	0	0	0.85277	1	7368	7368		25.45	1.2474	1	786850			1786	3698	1201	1203	2132	2132					-0.03543968895951366
ANQASMDA	8	Unmodified	_ANQASMDA_					0	0	0			REV__ENSG00000162105|ENST00000601538|SHANK2	REV__ENSG00000162105|ENST00000601538|SHANK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.1705627441406	2	404.16871	806.322867	-0.2371	-9.5827E-05	2.8329	0.001145	2.5958	0.0010491	404.170169463804	77.716	2.6143	78.284	77.489	80.104	0.56836					167	61	5	0	0	0	0.89043	1	8990	8990		35.618	3.6634	1	22410000	+		1787	20796	1202	1204	2133	2133					-0.08804146244597177
ANRSILFKLTS	11	Unmodified	_ANRSILFKLTS_					0	0	0			REV__ENSG00000179399|ENST00000377067|GPC5	REV__ENSG00000179399|ENST00000377067|GPC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.3677368164062	2	625.366787	1248.71902	0.88461	0.0005532	-1.7778	-0.0011118	-0.8932	-0.00055858	625.3655601309232	102.93	0.5733	102.97	102.71	103.28	0.043198					33	13	3	0	0	0	0.39278	1	11144	11144		59.931	6.8418	1	3200700	+		1788	22336	1203	1205	2134	2134					0.10461036868582596
ANRSILFKLTS	11	Unmodified	_ANRSILFKLTS_					0	0	0			REV__ENSG00000179399|ENST00000377067|GPC5	REV__ENSG00000179399|ENST00000377067|GPC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	625.3678588867188	2	625.366787	1248.71902	0.92517	0.00057857	-1.6522	-0.0010333	-0.72707	-0.00045469	625.365449326419	102.94	0.59602	103.07	102.81	103.4	0.12622					40	14	4	0	0	0	0.57736	1	10853	10853		46.457	3.5925	1	6481300	+		1789	22336	1203	1205	2135	2135					0.10461036868582596
ANRVYGPPSD	10	Unmodified	_ANRVYGPPSD_					0	0	0		ENSG00000100802|ENST00000299088|C14orf93	ENSG00000100802|ENST00000299088|C14orf93	ENSG00000100802|ENST00000299088|C14orf93	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3268432617188	2	538.261988	1074.50942	0.069557	3.744E-05	-3.3009	-0.0017768	-3.2314	-0.0017393	538.2600630310949	100.93	0.31936	101.14	100.96	101.28	0.2058					12	7	3	0	0	0	0.37624	1	10543	10543		54.776	6.8607	1	123210			1790	1871	1204	1206	2136	2136					-0.024852060845660162
ANSLGLPALK	10	Unmodified	_ANSLGLPALK_					0	0	0		nc|ENSG00000120805|P40616-2|ARL1;ENSG00000120805|ENST00000261636|ARL1	nc|ENSG00000120805|P40616-2|ARL1	nc|ENSG00000120805|P40616-2|ARL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.29913330078125	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.41	1	59.41	58.91	59.91	0								0	0	0	0.45132	1	5166	5166		29.17	0	1				1791	3153	1205	1207	2137	2137					0.08914333339919267
ANSVLFPCKY	10	Carbamidomethyl (C)	_ANSVLFPC(Carbamidomethyl (C))KY_	ANSVLFPC(1)KY		ANSVLFPC(44)KY		0	1	0		nc|ENSG00000196470|Q8IUQ4-2|SIAH1;ENSG00000196470|ENST00000394725|SIAH1;nc|ENSG00000196470|Q8IUQ4-3|SIAH1	nc|ENSG00000196470|Q8IUQ4-2|SIAH1	nc|ENSG00000196470|Q8IUQ4-2|SIAH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.7954711914062	2	599.799891	1197.58523	-0.48595	-0.00029147	-1.8739	-0.0011239	-2.3598	-0.0014154	599.798633522002	54.581	0.37048	54.574	54.385	54.756	-0.0077057					21	13	2	0	0	0	0.70553	1	4826	4826		44.377	7.2181	1	80551			1792	8062	1206	1208	2138	2138	96				-0.005659452286636224
ANSVLFPCKY	10	Carbamidomethyl (C)	_ANSVLFPC(Carbamidomethyl (C))KY_					0	1	0		nc|ENSG00000196470|Q8IUQ4-2|SIAH1;ENSG00000196470|ENST00000394725|SIAH1;nc|ENSG00000196470|Q8IUQ4-3|SIAH1	nc|ENSG00000196470|Q8IUQ4-2|SIAH1	nc|ENSG00000196470|Q8IUQ4-2|SIAH1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	599.799891	1197.58523	-1.4535	-0.00087183	-1.1835	-0.00070987	-2.637	-0.0015817	599.7990302496783	54.628	0.40671	54.655	54.351	54.758	0.027138	0.099178	0.00082888	NaN	44.377	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91001			1793	8062	1206	1208			96				-0.005659452286636224
ANTILGRKS	9	Unmodified	_ANTILGRKS_					0	0	0		nc|ENSG00000168116|Q9HCI6-2|KIAA1586;ENSG00000168116|ENST00000370733|KIAA1586	nc|ENSG00000168116|Q9HCI6-2|KIAA1586	nc|ENSG00000168116|Q9HCI6-2|KIAA1586	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.289306640625	2	480.285266	958.555979	1.5334	0.00073649	-0.84197	-0.00040439	0.69147	0.0003321	480.2847627897493	24.997	0.57834	24.483	24.19	24.768	-0.51365					27	12	3	0	0	0	0.20789	1	1274	1274		28.081	0	1	173720			1794	6371	1207	1209	2139	2139					0.0750427853738529
ANVKHLKILNT	11	Unmodified	_ANVKHLKILNT_					0	0	0		ENST00000488591.1_1_10:44876209-44880453:-|nuORF;ENSG00000107562|ENST00000343575|CXCL12;nc|ENSG00000107562|P48061-5|CXCL12;nc|ENSG00000107562|P48061|CXCL12;nc|ENSG00000107562|P48061-6|CXCL12;nc|ENSG00000107562|P48061-3|CXCL12;nc|ENSG00000107562|P48061-4|CXCL12;ENST00000496375.1_1_10:44874083-44881535:-|nuORF	ENST00000488591.1_1_10:44876209-44880453:-|nuORF	ENST00000488591.1_1_10:44876209-44880453:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.2977600097656	3	417.590828	1249.75066	-1.0799	-0.00045095	3.7947	0.0015846	2.7148	0.0011337	417.92632259974715	64.998	0.16808	65.036	64.982	65.15	0.037849					5	4	2	0	0	0	0.17289	1	5760	5760		21.78	9.8481	1	39121			1795	2351	1208	1210	2140	2140					0.13577029622501868
ANVTLLRTGVP	11	Unmodified	_ANVTLLRTGVP_					0	0	0			REV__nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3	REV__nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.8383178710938	2	570.840405	1139.66626	1.4099	0.00080484	-3.9627	-0.0022621	-2.5528	-0.0014572	570.8381986387325	50.383	0.69075	51.148	50.854	51.545	0.76494					40	16	3	0	0	0	0.69931	1	5001	5001		31.634	4.9414	1	2916800	+		1796	23889	1209	1211	2141	2141					0.10201078805766883
ANVYQLAKV	9	Unmodified	_ANVYQLAKV_					0	0	0			REV__ENSG00000185013|ENST00000304081|NT5C1B	REV__ENSG00000185013|ENST00000304081|NT5C1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	503.28802490234375	2	503.290017	1004.56548	0.80608	0.00040569	2.1927	0.0011036	2.9988	0.0015092	503.2909725186853	109.68	1.4053	109.76	109.44	110.85	0.078552					88	52	3	0	0	0	0.64922	1	11789	11789		44.117	3.3386	1	1533800	+		1797	22727	1210	1212	2142	2142					0.0633804682288428
APAAARRV	8	Unmodified	_APAAARRV_					0	0	0		ENSG00000228594|ENST00000422725|FNDC10	ENSG00000228594|ENST00000422725|FNDC10	ENSG00000228594|ENST00000422725|FNDC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2484130859375	2	406.248486	810.48242	3.1449	0.0012776	-2.7889	-0.001133	0.35606	0.00014465	406.24727030482205	114.56	0.97545	114.57	114.14	115.12	0.0094528					67	46	2	0	0	0	0.884	1	13806	13806		33.516	11.813	1	78189			1798	8722	1211	1213	2143	2143					0.06959774885558545
APAAARRV	8	Unmodified	_APAAARRV_					0	0	0		ENSG00000228594|ENST00000422725|FNDC10	ENSG00000228594|ENST00000422725|FNDC10	ENSG00000228594|ENST00000422725|FNDC10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	406.248486	810.48242	0.73411	0.00029823	-1.2434	-0.00050514	-0.50931	-0.00020691	406.2478354448143	114.56	0.087685	114.62	114.55	114.64	0.061073	0.027913	0.0012224	NaN	33.516	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14681			1799	8722	1211	1213							0.06959774885558545
APAALLLLPL	10	Unmodified	_APAALLLLPL_					0	0	0			REV__ENST00000493548.5_1_6:32122153-32123690:+|nuORF	REV__ENST00000493548.5_1_6:32122153-32123690:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.33258056640625	2	496.331153	990.647754	-1.3548	-0.00067244	4.1362	0.0020529	2.7813	0.0013805	496.3331234696485	60.849	0.87923	60.849	60.216	61.095	0					55	36	2	0	0	0	0.85108	1	5338	5338		19.36	0	1	67017	+		1800	23723	1212	1214	2144	2144					0.15205568901853894
APAEDVFKKPL	11	Unmodified	_APAEDVFKKPL_					0	0	0		ENST00000454079.5_1_3:50099373-50114563:+|nuORF;ENST00000434592.5_1_3:50097096-50127827:+|nuORF;ENST00000441115.5_1_3:50012785-50103056:+|nuORF;nc|ENSG00000004534|P78332-2|RBM6;ENSG00000004534|ENST00000266022|RBM6	ENST00000454079.5_1_3:50099373-50114563:+|nuORF	ENST00000454079.5_1_3:50099373-50114563:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5638122558594	3	405.564168	1213.67067	-1.8603	-0.00075448	3.3649	0.0013647	1.5046	0.00061022	405.5653949658049	63.143	1.4987	63.257	62.721	64.22	0.11388					139	74	3	0	0	0	0.73893	1	5543	5543		16.53	0.6092	1	273590			1801	662	1213	1215	2145	2145					0.07238543228686467
APAKLIVY	8	Unmodified	_APAKLIVY_					0	0	0		ENST00000556354.5_1_14:23983477-24028046:+|nuORF;ENSG00000259431|ENST00000288014|THTPA	ENST00000556354.5_1_14:23983477-24028046:+|nuORF	ENST00000556354.5_1_14:23983477-24028046:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7708740234375	2	437.773471	873.53239	-1.5883	-0.00069529	-3.2181	-0.0014088	-4.8063	-0.0021041	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.83466	1	2287	2287		23.037	1.3344	1	1227500			1802	8914	1214	1216	2146	2146					0.09056464770844741
APAKLIVY	8	Unmodified	_APAKLIVY_					0	0	0		ENST00000556354.5_1_14:23983477-24028046:+|nuORF;ENSG00000259431|ENST00000288014|THTPA	ENST00000556354.5_1_14:23983477-24028046:+|nuORF	ENST00000556354.5_1_14:23983477-24028046:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.77117919921875	2	437.773471	873.53239	-1.5858	-0.00069423	-3.2177	-0.0014086	-4.8035	-0.0021029	437.77200270373476	39.973	1.5307	39.98	39.296	40.827	0.0065002					71	45	3	0	0	0	0.83466	1	2494	2494		23.037	1.3344	1	3015800			1803	8914	1214	1216	2147	2147					0.09056464770844741
APAKLIVY	8	Unmodified	_APAKLIVY_					0	0	0		ENST00000556354.5_1_14:23983477-24028046:+|nuORF;ENSG00000259431|ENST00000288014|THTPA	ENST00000556354.5_1_14:23983477-24028046:+|nuORF	ENST00000556354.5_1_14:23983477-24028046:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7716064453125	2	437.773471	873.53239	-0.60382	-0.00026434	-3.2012	-0.0014014	-3.8051	-0.0016658	437.771905353534	38.344	0.47827	38.686	38.418	38.896	0.34187					32	11	3	0	0	0	0.83466	1	3159	3159		23.037	3.6767	1	1117700			1804	8914	1214	1216	2148	2148					0.09056464770844741
APAKLIVY	8	Unmodified	_APAKLIVY_					0	0	0		ENST00000556354.5_1_14:23983477-24028046:+|nuORF;ENSG00000259431|ENST00000288014|THTPA	ENST00000556354.5_1_14:23983477-24028046:+|nuORF	ENST00000556354.5_1_14:23983477-24028046:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77197265625	2	437.773471	873.53239	-0.032548	-1.4248E-05	-3.9212	-0.0017166	-3.9537	-0.0017308	437.77161269438426	38.189	0.59097	38.711	38.32	38.911	0.52235					36	14	3	0	0	0	0.87276	1	3130	3130		29.842	3.0454	1	1204300			1805	8914	1214	1216	2149	2149					0.09056464770844741
APAKPPPR	8	Unmodified	_APAKPPPR_					0	0	0			REV__ENSG00000156860|ENST00000356166|FBRS	REV__ENSG00000156860|ENST00000356166|FBRS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2544250488281	2	417.253237	832.491922	-1.8958	-0.00079101	1.4773	0.0006164	-0.41848	-0.00017461	417.2537348130364	35.472	1.6692	35.503	35.168	36.838	0.031132					80	49	2	0	0	0	0.81724	1	1857	1857		14.664	0	1	197380	+		1806	20510	1215	1217	2150	2150					0.06897543171089637
APALPPPH	8	Unmodified	_APALPPPH_					0	0	0		chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1;ENSG00000144711|ENST00000613206|IQSEC1	chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1	chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2283020019531	2	400.226688	798.438824	-0.058285	-2.3327E-05	2.876	0.0011511	2.8177	0.0011277	400.2280059844884	52.237	1.9334	52.905	52.23	54.164	0.66729					76	46	3	0	0	0	0.80127	1	5244	5244		16.705	6.5202	1	9506900			1807	389	1216	1218	2151	2151					0.0315416538842328
APALTKKME	9	Unmodified	_APALTKKME_					0	0	0		ENST00000515326.5_1_5:43120988-43121222:+|nuORF	ENST00000515326.5_1_5:43120988-43121222:+|nuORF	ENST00000515326.5_1_5:43120988-43121222:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7804260253906	2	494.778428	987.542302	-0.074951	-3.7084E-05	4.0919	0.0020246	4.017	0.0019875	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.58668	1	8821	8821		47.657	11.211	1	651380			1808	13081	1217	1219	2152	2152					0.0480328471392113
APAPAPALVP	10	Unmodified	_APAPAPALVP_					0	0	0			REV__ENSG00000129757|ENST00000440480|CDKN1C	REV__ENSG00000129757|ENST00000440480|CDKN1C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2391052246094	2	452.268553	902.522553	-0.36852	-0.00016667	-0.62689	-0.00028352	-0.99541	-0.00045019	452.269958537054	25.213	0.17842	24.884	24.793	24.972	-0.32825					5	3	2	0	0	0	0.37624	1	1273	1273		12.959	0	1	7706.4	+		1809	18833	1218	1220	2153	2153					0.06739276765472368
APAPCVPALI	10	Unmodified	_APAPCVPALI_					0	0	0			REV__ENST00000444772.3_1_10:21805118-21806168:-|nuORF	REV__ENST00000444772.3_1_10:21805118-21806168:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.2727966308594	2	476.270238	950.525924	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.812	1	25.771	25.271	26.271	-0.04117								0	0	0	0.45132	1	1117	1117		35.201	8.4046	1		+		1810	26791	1219	1221	2154	2154					0.048682035478236685
APAPIHNQF	9	Unmodified	_APAPIHNQF_					0	0	0		nc|ENSG00000051108|Q15011-4|HERPUD1;nc|ENSG00000051108|Q15011-2|HERPUD1;ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF	nc|ENSG00000051108|Q15011-4|HERPUD1	nc|ENSG00000051108|Q15011-4|HERPUD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.759033203125	2	497.758884	993.503215	-2.0194	-0.0010052	0.93632	0.00046606	-1.083	-0.0005391	497.75912725977514	39.916	1.0062	40.284	39.729	40.736	0.36797					59	24	3	0	0	0	0.021904	3	3363	3363;3375;3389		123.99	76.073	1	1103400			1811	997	1220	1222	2155;2156;2157	2155					0.006203204745702351
APAPIHNQF	9	Unmodified	_APAPIHNQF_					0	0	0		nc|ENSG00000051108|Q15011-4|HERPUD1;nc|ENSG00000051108|Q15011-2|HERPUD1;ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF	nc|ENSG00000051108|Q15011-4|HERPUD1	nc|ENSG00000051108|Q15011-4|HERPUD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7589416503906	2	497.758884	993.503215	-1.4507	-0.00072211	0.097248	4.8406E-05	-1.3535	-0.0006737	497.75876705006965	39.74	1.3147	40.295	39.485	40.8	0.55449					81	30	4	0	0	0	0.1211	3	3362	3362;3375;3389		88.643	48.07	1	1149900			1812	997	1220	1222	2158;2159;2160	2158					0.006203204745702351
APAPSTVHF	9	Unmodified	_APAPSTVHF_					0	0	0		nc|ENSG00000155090|Q13118-2|KLF10;ENSG00000155090|ENST00000285407|KLF10	nc|ENSG00000155090|Q13118-2|KLF10	nc|ENSG00000155090|Q13118-2|KLF10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7394714355469	2	463.74016	925.465767	-1.0083	-0.00046758	-0.97895	-0.00045398	-1.9872	-0.00092156	463.7395007544385	43.9	0.68911	44.35	44.043	44.732	0.45024					38	16	3	0	0	0	0.043636	2	4000	4000;4011		110.34	47.031	1	1775700			1813	5311	1221	1223	2161;2162	2161					5.229208954915521E-05
APAPSTVHF	9	Unmodified	_APAPSTVHF_					0	0	0		nc|ENSG00000155090|Q13118-2|KLF10;ENSG00000155090|ENST00000285407|KLF10	nc|ENSG00000155090|Q13118-2|KLF10	nc|ENSG00000155090|Q13118-2|KLF10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.73748779296875	2	463.74016	925.465767	-1.7625	-0.00081733	-0.80013	-0.00037105	-2.5626	-0.0011884	463.7396210992119	43.688	0.64988	44.462	44.183	44.833	0.7738					35	15	3	0	0	0	0.027997	3	3986	3968;3986;3998		119.56	59.263	1	1631900			1814	5311	1221	1223	2163;2164;2165	2164					5.229208954915521E-05
APASSLSGFV	10	Unmodified	_APASSLSGFV_					0	0	0			REV__nc|ENSG00000198718|Q9Y4F4|TOGARAM1	REV__nc|ENSG00000198718|Q9Y4F4|TOGARAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.24481201171875	2	468.245275	934.475997	0.22264	0.00010425	-1.244	-0.0005825	-1.0214	-0.00047825	468.24455399922584	105.74	1.8615	105.78	105.17	107.03	0.038322					109	43	4	0	0	0	0.74274	1	11577	11577		42.396	7.1954	1	1899000	+		1815	23361	1222	1224	2166	2166					0.006137921435424687
APAVRAAR	8	Unmodified	_APAVRAAR_					0	0	0			REV__nc|ENSG00000168502|Q9Y4B5|MTCL1	REV__nc|ENSG00000168502|Q9Y4B5|MTCL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2488098144531	2	406.248486	810.48242	3.1798	0.0012918	-2.835	-0.0011517	0.34482	0.00014008	406.2472019608831	118.01	0.77022	118.03	117.4	118.17	0.026466					37	25	2	0	0	0	0.82419	1	12963	12963		13.775	0.81615	1	37448	+		1816	21494	1223	1225	2167	2167					0.06959774885558545
APAYFLCI	8	Unmodified	_APAYFLCI_					0	0	0		ENSG00000177108|ENST00000319374|ZDHHC22	ENSG00000177108|ENST00000319374|ZDHHC22	ENSG00000177108|ENST00000319374|ZDHHC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2320251464844	2	449.230582	896.446611	-1.2863	-0.00057784	1.2985	0.00058334	0.012238	5.4976E-06	449.2311264032564	83.242	4.4752	83.407	81.466	85.941	0.1651					199	104	3	0	0	0	0.91333	1	8072	8072		43.626	14.476	1	231800			1817	7118	1224	1226	2168	2168					-0.005754434063192093
APDRKGFRLL	10	Unmodified	_APDRKGFRLL_					0	0	0		ENSG00000159339|ENST00000375448|PADI4	ENSG00000159339|ENST00000375448|PADI4	ENSG00000159339|ENST00000375448|PADI4	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.8224487304688	2	586.848564	1171.68258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.3	1	113.3	112.8	113.8	0								0	0	0	0.45132	1	11708	11708		19.997	5.1319	1				1818	5524	1225	1227	2169	2169					0.1036020476253725
APDSVLRL	8	Unmodified	_APDSVLRL_					0	0	0		ENST00000462833.5_1_3:123167964-123168408:-|nuORF	ENST00000462833.5_1_3:123167964-123168408:-|nuORF	ENST00000462833.5_1_3:123167964-123168408:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7545471191406	2	435.75581	869.497067	-0.098992	-4.3136E-05	-2.3128	-0.0010078	-2.4118	-0.0010509	435.75462599362015	78.181	0.86222	78.586	77.977	78.839	0.40531					45	20	3	0	0	0	0.87479	1	8938	8938		30.504	2.6214	1	792420			1819	12052	1226	1228	2170	2170					0.05709802243052309
APEEHPVLL	9	Unmodified	_APEEHPVLL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.7738952636719	2	502.7742	1003.53385	-1.3346	-0.00067101	0.46357	0.00023307	-0.87105	-0.00043794	502.7743598071184	47.783	1.2213	48.253	47.733	48.954	0.46941					90	30	5	0	0	0	0.0096923	6	4555	4544;4555;4566;4578;4589;4602		133.47	56.695	1	13070000			1820	1338;8080;12043	1227	1229	2171;2172;2173;2174;2175;2176	2172					0.032220540689422705
APEEHPVLL	9	Unmodified	_APEEHPVLL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.7738037109375	2	502.7742	1003.53385	-0.32001	-0.00016089	-0.61269	-0.00030805	-0.9327	-0.00046894	502.7738165502655	47.638	1.2677	48.561	48.12	49.388	0.92315					104	31	5	0	0	0	0.0096923	5	4561	4534;4550;4561;4592;4605		133.47	51.164	1	13228000			1821	1338;8080;12043	1227	1229	2177;2178;2179;2180;2181	2179					0.032220540689422705
APEPLSRK	8	Unmodified	_APEPLSRK_					0	0	0			REV__ENSG00000112159|ENST00000369393|MDN1	REV__ENSG00000112159|ENST00000369393|MDN1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2607421875	2	449.261259	896.507966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.281	1	73.365	72.865	73.865	0.083138								0	0	0	0.29747	1	6725	6725		37.812	0.65241	1		+		1822	17920	1228	1230	2182	2182					0.05557204617332445
APFDKTANITF	11	Unmodified	_APFDKTANITF_					0	0	0		ENST00000586690.1_1_19:55748009-55750864:-|nuORF;ENSG00000105063|ENST00000412770|PPP6R1	ENST00000586690.1_1_19:55748009-55750864:-|nuORF	ENST00000586690.1_1_19:55748009-55750864:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.8797607421875	3	408.880156	1223.61864	-2.1156	-0.00086504	0.68771	0.00028119	-1.4279	-0.00058385	408.8803002562497	23.885	1.1542	23.885	23.413	24.568	0					112	51	3	0	0	0	0.69071	1	803	803		33.039	3.4886	1	176940			1823	2182	1229	1231	2183	2183					0.015773798148757123
APFIVRLALVP	11	Unmodified	_APFIVRLALVP_					0	0	0			REV__nc|ENSG00000130270|O60423-3|ATP8B3	REV__nc|ENSG00000130270|O60423-3|ATP8B3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3803100585938	2	598.381709	1194.74886	-0.19422	-0.00011622	-0.05868	-3.5113E-05	-0.25291	-0.00015133	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.71452	1	2925	2925		29.15	1.0681	1	825320	+		1824	18862	1230	1232	2184	2184					0.15928020604542326
APFKVLMKVRH	11	Unmodified	_APFKVLMKVRH_					0	0	0			REV__ENST00000562539.1_1_16:74946047-74949971:-|nuORF	REV__ENST00000562539.1_1_16:74946047-74949971:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.5992126464844	3	442.60067	1324.78018	0.94149	0.00041671	-3.5774	-0.0015834	-2.6359	-0.0011667	442.59892389076134	48.942	1.6202	48.942	48.276	49.896	0.00016785					103	36	4	0	0	0	0.69931	1	4127	4127		31.634	1.0654	1	343460	+		1825	28801	1231	1233	2185	2185					0.13078270366986544
APFLGPLPT	9	Unmodified	_APFLGPLPT_					0	0	0		ENST00000489952.5_1_11:64559674-64566943:-|nuORF;nc|ENSG00000168067|Q12851-2|MAP4K2;ENSG00000168067|ENST00000294066|MAP4K2	ENST00000489952.5_1_11:64559674-64566943:-|nuORF	ENST00000489952.5_1_11:64559674-64566943:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7611389160156	2	456.763104	911.511654	0.16213	7.4054E-05	-3.8695	-0.0017675	-3.7074	-0.0016934	456.7608771100702	34.381	0.51115	34.489	34.229	34.74	0.10829					32	21	2	0	0	0	0.67235	1	1731	1731		42.474	6.8562	1	94464			1826	6364	1232	1234	2186	2186					0.05235874391166817
APFRRPLY	8	Unmodified	_APFRRPLY_					0	0	0		nc|ENSG00000159363|Q9NQ11-3|ATP13A2;ENSG00000159363|ENST00000326735|ATP13A2;nc|ENSG00000159363|Q9NQ11-2|ATP13A2;ENST00000466561.1_1_1:17313027-17318334:-|nuORF	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.29071044921875	2	510.292894	1018.57123	0.26746	0.00013648	-1.795	-0.00091599	-1.5276	-0.00077951	510.2918455179726	53.31	1.1574	53.724	52.92	54.077	0.4139					73	27	4	0	0	0	0.9159	1	5336	5336		44.531	0	1	3524900			1827	5527	1233	1235	2187	2187					0.06269190125215118
APFSKVLTF	9	Unmodified	_APFSKVLTF_					0	0	0		nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;ENSG00000170606|ENST00000304858|HSPA4;ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1	nc|ENSG00000120694|Q92598-2|HSPH1	nc|ENSG00000120694|Q92598-2|HSPH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.2901916503906	2	505.289485	1008.56442	0.2119	0.00010707	-0.25017	-0.00012641	-0.038277	-1.9341E-05	505.28913897148243	68.622	0.82584	69.007	68.611	69.437	0.38483					45	19	3	0	0	0	0.19437	2	7573	7573;7586		75.043	0	1	386840			1828	3145	1234	1236	2188;2189	2188					0.06047832453987212
APFSKVLTF	9	Unmodified	_APFSKVLTF_					0	0	0		nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;ENSG00000170606|ENST00000304858|HSPA4;ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1	nc|ENSG00000120694|Q92598-2|HSPH1	nc|ENSG00000120694|Q92598-2|HSPH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.2900695800781	2	505.289485	1008.56442	0.47262	0.00023881	0.18781	9.4901E-05	0.66044	0.00033371	505.28921932813995	68.542	0.793	69.089	68.699	69.492	0.54694					48	18	4	0	0	0	0.36616	1	7588	7588		60.118	0	1	410390			1829	3145	1234	1236	2190	2190					0.06047832453987212
APFVDVIGKTG	11	Unmodified	_APFVDVIGKTG_					0	0	0			REV__ENST00000392238.2_1_2:203630974-203631079:+|nuORF	REV__ENST00000392238.2_1_2:203630974-203631079:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.3065185546875	2	552.308406	1102.60226	-0.69245	-0.00038245	-2.6095	-0.0014412	-3.3019	-0.0018237	552.3068506755722	92.408	2.4109	92.871	91.891	94.302	0.46249					185	56	4	0	0	0	0.7342	1	10993	10993		25.574	0	1	607550	+		1830	26017	1235	1237	2191	2191					0.05506298648788288
APGACGGRH	9	Unmodified	_APGACGGRH_					0	0	0			REV__chr11:122100406-122101447|62|20.84|0.91|4.51|-|2|MIR100HG,MIR100HG|1	REV__chr11:122100406-122101447|62|20.84|0.91|4.51|-|2|MIR100HG,MIR100HG|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1839294433594	2	413.192854	824.371155	1.7359	0.00071726	1.0544	0.00043568	2.7903	0.0011529	413.19335657705454	99.179	0.2283	99.542	99.447	99.676	0.36292					8	5	2	0	0	0	0.20789	1	12013	12013		20.482	0	1	121300	+		1831	15488	1236	1238	2192	2192					-0.04805607814034829
APGAPPRTL	9	Unmodified	_APGAPPRTL_					0	0	0		ENSG00000182768|ENST00000379095|NGRN;ENST00000561573.1_1_15:90806992-90815017:+|nuORF	ENSG00000182768|ENST00000379095|NGRN	ENSG00000182768|ENST00000379095|NGRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2555847167969	2	440.255977	878.497401	0.40701	0.00017919	-1.6183	-0.00071247	-1.2113	-0.00053328	440.25507557275375	63.556	1.6285	64.111	63.598	65.226	0.55449					91	38	4	0	0	0	0.7932	1	6918	6918		25.45	4.9683	1	1465000			1832	7472	1237	1239	2193	2193					0.05329221962904285
APGGGKQKG	9	Unmodified	_APGGGKQKG_					0	0	0		ENSG00000112293|ENST00000230036|GPLD1	ENSG00000112293|ENST00000230036|GPLD1	ENSG00000112293|ENST00000230036|GPLD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.2257080078125	2	400.224677	798.434801	-0.40518	-0.00016216	2.6947	0.0010785	2.2895	0.0009163	400.2256113330208	16.522	0.22395	16.442	16.327	16.551	-0.080017					12	8	2	0	0	0	0.78058	1	131	131		30.504	3.7075	1	101260			1833	2651	1238	1240	2194	2194					0.027520758947161994
APGHHLLLGPP	11	Unmodified	_APGHHLLLGPP_					0	0	0		ENST00000592895.5_1_19:1986234-1986456:-|nuORF	ENST00000592895.5_1_19:1986234-1986456:-|nuORF	ENST00000592895.5_1_19:1986234-1986456:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.8008422851562	2	554.816733	1107.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.903	1	19.903	19.403	20.403	0								0	0	0	0.56276	1	450	450		24.203	0	1				1834	14297	1239	1241	2195	2195					0.06940844325436046
APGKRAQLLKK	11	Unmodified	_APGKRAQLLKK_					0	0	0		ENST00000545893.5_1_17:38345052-38350037:+|nuORF;nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1;nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1;nc|ENSG00000108352|Q9UHV5|RAPGEFL1;ENSG00000108352|ENST00000620260|RAPGEFL1	ENST00000545893.5_1_17:38345052-38350037:+|nuORF	ENST00000545893.5_1_17:38345052-38350037:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.92938232421875	3	403.931185	1208.77173	0.25098	0.00010138	-4.1453	-0.0016744	-3.8943	-0.001573	403.92942319004646	47.073	4.6899	47.112	45.811	50.501	0.038181					268	130	4	0	0	0	0.76699	1	3615	3615		16.53	4.8939	1	2178500			1835	2400	1240	1242	2196	2196					0.17569039722025082
APGLYGWCLL	10	Carbamidomethyl (C)	_APGLYGWC(Carbamidomethyl (C))LL_	APGLYGWC(1)LL		APGLYGWC(55)LL		0	1	0			REV__ENST00000367511.3_1_1:184761771-184761879:-|nuORF	REV__ENST00000367511.3_1_1:184761771-184761879:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2955932617188	2	575.291702	1148.56885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.719	1	77.119	76.619	77.619	0.39969								0	0	0	0.45132	1	8716	8716		54.765	6.8051	1		+		1836	25567	1241	1243	2197	2197	312				0.0005097360526633565
APGMKKIK	8	Unmodified	_APGMKKIK_					0	0	0		ENSG00000083635|ENST00000379161|NUFIP1	ENSG00000083635|ENST00000379161|NUFIP1	ENSG00000083635|ENST00000379161|NUFIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7741394042969	2	436.772948	871.531344	-0.34986	-0.00015281	1.4315	0.00062523	1.0816	0.00047242	436.77383375696394	27.418	1.1225	27.379	27.041	28.164	-0.038523					45	25	2	0	0	0	0.81724	1	1292	1292		14.664	0.88877	1	85606			1837	1503	1242	1244	2198	2198					0.09043927130301199
APGRLAKH	8	Unmodified	_APGRLAKH_					0	0	0		chr10:70885929-70887665|22|50.36|0.84|5.9|-|1|PCBD1,None|1	chr10:70885929-70887665|22|50.36|0.84|5.9|-|1|PCBD1,None|1	chr10:70885929-70887665|22|50.36|0.84|5.9|-|1|PCBD1,None|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.5751953125	2	425.256311	848.49807	0.46125	0.00019615	-1.7163	-0.00072986	-1.255	-0.00053371	425.2554512187513	31.18	0.56235	31.184	30.84	31.402	0.0037212					18	12	2	0	0	0	0.4196	1	2075	2075		20.482	0	1	89291			1838	82	1243	1245	2199	2199					0.06776061402615596
APGSATMKECN	11	Unmodified	_APGSATMKECN_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.74365234375	2	554.741716	1107.46888	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.409	1	23.895	23.395	24.395	-0.51365								0	0	0	0.56276	1	1181	1181		35.152	1.2304	1				1839	15193	1244	1246	2200	2200					-0.08055631790853113
APGTHGSVMQL	11	Unmodified	_APGTHGSVMQL_					0	0	0			REV__ENST00000467719.5_1_11:2937762-2940985:+|nuORF	REV__ENST00000467719.5_1_11:2937762-2940985:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.2721557617188	2	549.274041	1096.53353	-0.1749	-9.6065E-05	-4.3707	-0.0024007	-4.5456	-0.0024968	549.2716195145375	43.695	0.73362	43.668	43.317	44.05	-0.026764					25	17	2	0	0	0	0.34641	1	3364	3364		63.534	10.182	1	227470	+		1840	27164	1245	1247	2201	2201					-0.01087688922552843
APGTKRSPSA	10	Unmodified	_APGTKRSPSA_					0	0	0		nc|ENSG00000132128|Q15345-3|LRRC41;ENSG00000132128|ENST00000617190|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.2667236328125	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.80179	1	8645	8645		39.253	2.8061	1	1702800			1841	3765	1246	1248	2202	2202					0.03315401640657001
APGTKRSPSA	10	Unmodified	_APGTKRSPSA_					0	0	0		nc|ENSG00000132128|Q15345-3|LRRC41;ENSG00000132128|ENST00000617190|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.26806640625	2	486.267073	970.519593	-0.74239	-0.000361	0.70437	0.00034251	-0.038029	-1.8492E-05	486.2673170980509	86.118	3.9821	86.565	85.471	89.453	0.44736					252	97	4	0	0	0	0.8545	1	10316	10316		36.447	0.82846	1	1474100			1842	3765	1246	1248	2203	2203					0.03315401640657001
APGTPPRR	8	Unmodified	_APGTPPRR_					0	0	0		ENSG00000171794|ENST00000304477|UTF1	ENSG00000171794|ENST00000304477|UTF1	ENSG00000171794|ENST00000304477|UTF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2458801269531	2	426.245944	850.477334	0.55579	0.0002369	-0.29201	-0.00012447	0.26378	0.00011243	426.24575751127946	87.37	3.4516	87.816	85.746	89.198	0.44628					161	83	2	0	0	0	0.84341	1	10294	10294		24.203	2.2429	1	2779100			1843	6710	1247	1249	2204	2204					0.046114710229517186
APGTPPRR	8	Unmodified	_APGTPPRR_					0	0	0		ENSG00000171794|ENST00000304477|UTF1	ENSG00000171794|ENST00000304477|UTF1	ENSG00000171794|ENST00000304477|UTF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.245849609375	2	426.245944	850.477334	-0.71681	-0.00030554	0.86718	0.00036963	0.15037	6.4093E-05	426.24624802256477	87.382	3.0594	87.845	86.168	89.227	0.46312					121	74	2	0	0	0	0.87064	2	10282	10282;10306		37.159	5.2042	1	3022100			1844	6710	1247	1249	2205;2206	2205					0.046114710229517186
APHFAGLH	8	Unmodified	_APHFAGLH_					0	0	0			REV__nc|ENSG00000140488|Q96J87-4|CELF6	REV__nc|ENSG00000140488|Q96J87-4|CELF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.2220764160156	2	425.221937	848.429321	0.81045	0.00034462	-0.90657	-0.00038549	-0.096111	-4.0868E-05	425.221458343279	88.16	1.4255	88.609	88.143	89.569	0.44893					71	34	3	0	0	0	0.88393	1	10377	10377		33.493	0	1	943770	+		1845	19625	1248	1250	2207	2207					-0.0009560289711316727
APHLPQPAPV	10	Unmodified	_APHLPQPAPV_					0	0	0			REV__ENST00000589553.5_1_17:76116732-76116969:-|nuORF	REV__ENST00000589553.5_1_17:76116732-76116969:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.9755249023438	2	513.790184	1025.56581	0.40532	0.00020825	-0.77769	-0.00039957	-0.37238	-0.00019132	513.7900412833727	19.572	0.45741	18.942	18.711	19.168	-0.6296					14	9	2	0	0	0	0.37624	1	518	518		37.159	19.691	1	23132	+		1846	29164	1249	1251	2208	2208					0.05405466542742943
APIEKRIIKGF	11	Unmodified	_APIEKRIIKGF_					0	0	0			REV__ENSG00000169567|ENST00000304043|HINT1	REV__ENSG00000169567|ENST00000304043|HINT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	636.3970947265625	2	636.395348	1270.77614	-0.01464	-9.3171E-06	2.9395	0.0018707	2.9248	0.0018614	636.3974001587258	101.99	0.74551	101.99	101.57	102.32	0					40	18	3	0	0	0	0.76699	1	10400	10400		18.262	0.89712	1	242290	+		1847	21587	1250	1252	2209	2209					0.1515850414491524
APIFRITLPVL	11	Unmodified	_APIFRITLPVL_					0	0	0		ENST00000430145.3_1_19:49166463-49183997:+|nuORF;ENSG00000176920|ENST00000425340|FUT2	ENST00000430145.3_1_19:49166463-49183997:+|nuORF	ENST00000430145.3_1_19:49166463-49183997:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.93267822265625	3	413.932303	1238.77508	-1.0065	-0.00041663	2.0357	0.00084266	1.0292	0.00042603	413.93306098265026	44.954	2.5911	44.923	43.876	46.467	-0.031067					192	60	4	0	0	0	0.77511	1	3604	3604		16.53	0.52308	1	748080			1848	11626	1251	1253	2210	2210					0.16524289776043588
APIKGYII	8	Unmodified	_APIKGYII_					0	0	0			REV__ENSG00000138379|ENST00000260950|MSTN	REV__ENSG00000138379|ENST00000260950|MSTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7713623046875	2	437.773471	873.53239	-0.99724	-0.00043656	-4.0891	-0.0017901	-5.0864	-0.0022267	437.77179407937126	38.831	0.76415	39.173	38.896	39.661	0.34187					66	17	5	0	0	0	0.92176	1	3267	3267		46.766	7.7449	1	15326000	+		1849	19466	1252	1254	2211	2211					0.09056464770844741
APILRLRE	8	Unmodified	_APILRLRE_					0	0	0		ENST00000589292.1_1_18:57677720-57677828:-|nuORF	ENST00000589292.1_1_18:57677720-57677828:-|nuORF	ENST00000589292.1_1_18:57677720-57677828:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.3077697753906	2	484.306001	966.597449	-0.09098	-4.4062E-05	4.0405	0.0019568	3.9495	0.0019128	484.3078570958868	81.122	1.1991	81.187	80.799	81.998	0.064384					70	27	4	0	0	0	0.66521	1	7954	7954		68.787	10.976	1	905260			1850	14235	1253	1255	2212	2212					0.11281459296708363
APIPHDGNLY	10	Unmodified	_APIPHDGNLY_					0	0	0		ENST00000522843.5_1_8:59477592-59488665:+|nuORF;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;nc|ENSG00000137575|O00560-3|SDCBP;nc|ENSG00000137575|O00560-2|SDCBP;ENSG00000137575|ENST00000260130|SDCBP	ENST00000522843.5_1_8:59477592-59488665:+|nuORF	ENST00000522843.5_1_8:59477592-59488665:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.7750244140625	2	548.774731	1095.53491	-1.6127	-0.00088502	1.3393	0.00073496	-0.27345	-0.00015006	548.7753397191622	47.284	1.1601	47.756	47.388	48.548	0.47139					59	28	3	0	0	0	0.017804	4	4477	4466;4477;4489;4502		124.08	52.702	1	2400700			1851	4216	1254	1256	2213;2214;2215;2216	2214					-0.009037315621299058
APIPHDGNLY	10	Unmodified	_APIPHDGNLY_					0	0	0		ENST00000522843.5_1_8:59477592-59488665:+|nuORF;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;nc|ENSG00000137575|O00560-3|SDCBP;nc|ENSG00000137575|O00560-2|SDCBP;ENSG00000137575|ENST00000260130|SDCBP	ENST00000522843.5_1_8:59477592-59488665:+|nuORF	ENST00000522843.5_1_8:59477592-59488665:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.7747802734375	2	548.774731	1095.53491	-1.1408	-0.00062604	0.86526	0.00047483	-0.27553	-0.00015121	548.7751043795978	47.042	1.0928	47.965	47.651	48.744	0.92315					54	26	3	0	0	0	0.029561	5	4480	4457;4467;4480;4493;4505		115.49	49.065	1	2365900			1852	4216	1254	1256	2217;2218;2219;2220;2221	2219					-0.009037315621299058
APIPPSRYL	9	Unmodified	_APIPPSRYL_					0	0	0		ENST00000477143.5_1_16:319270-321397:-|nuORF	ENST00000477143.5_1_16:319270-321397:-|nuORF	ENST00000477143.5_1_16:319270-321397:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.29034423828125	2	507.292559	1012.57057	-1.7442	-0.0008848	-2.4253	-0.0012303	-4.1695	-0.0021151	507.29114569123766	30.055	0.55795	30.055	29.764	30.322	0					28	16	2	0	0	0	0.7932	1	1360	1360		23.042	1.0826	1	125300			1853	12352	1255	1257	2222	2222					0.06478350685517853
APIRLREL	8	Unmodified	_APIRLREL_					0	0	0		ENSG00000166747|ENST00000299980|AP1G1;ENST00000566161.5_1_16:71808369-71823382:-|nuORF;nc|ENSG00000166747|O43747-2|AP1G1	ENSG00000166747|ENST00000299980|AP1G1	ENSG00000166747|ENST00000299980|AP1G1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.3074035644531	2	484.306001	966.597449	-0.09098	-4.4062E-05	4.0405	0.0019568	3.9495	0.0019128	484.3078570958868	81.122	1.1991	81.187	80.799	81.998	0.064384					70	27	4	0	0	0	0.79403	2	8003	8003;8015		63.306	4.9468	1	905260			1854	6226	1256	1258	2223;2224	2223					0.11281459296708363
APIRPDIVNF	10	Unmodified	_APIRPDIVNF_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.3217163085938	2	571.321848	1140.62914	-0.37115	-0.00021205	0.23852	0.00013627	-0.13263	-7.5772E-05	571.321732381747	64.551	0.91113	64.937	64.482	65.393	0.38615					59	21	4	0	0	0	0.57305	2	6978	6967;6978		51.528	7.9748	1	927120			1855	6934	1257	1259	2225;2226	2226					0.0644540725998013
APIRPDIVNF	10	Unmodified	_APIRPDIVNF_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.3221435546875	2	571.321848	1140.62914	0.53951	0.00030824	-0.82417	-0.00047086	-0.28465	-0.00016263	571.3212757910784	64.451	0.72825	65.004	64.641	65.37	0.55386					52	17	4	0	0	0	0.49027	2	6999	6999;7012		56.632	16.06	1	859150			1856	6934	1257	1259	2227;2228	2227					0.0644540725998013
APISPKDSFP	10	Unmodified	_APISPKDSFP_					0	0	0			REV__ENSG00000043462|ENST00000046794|LCP2	REV__ENSG00000043462|ENST00000046794|LCP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7808227539062	2	529.779482	1057.54441	0.48299	0.00025588	2.5534	0.0013527	3.0364	0.0016086	529.7808329578639	51.683	0.82608	52.119	51.781	52.607	0.43505					46	19	4	0	0	0	0.86348	1	5168	5168		31.53	1.0262	1	952840	+		1857	16337	1258	1260	2229	2229					0.017940367233904908
APIYSLIV	8	Unmodified	_APIYSLIV_					0	0	0			REV__nc|ENSG00000165115|Q86VH2-4|KIF27	REV__nc|ENSG00000165115|Q86VH2-4|KIF27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633972167969	2	438.265479	874.516405	-1.0936	-0.00047928	-3.4121	-0.0014954	-4.5057	-0.0019747	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.81548	1	2734	2734		20.482	2.1574	1	2862500	+		1858	29999	1259	1261	2230	2230					0.07412758533951092
APKASKLH	8	Unmodified	_APKASKLH_					0	0	0		ENST00000489602.1_1_3:157213259-157223189:-|nuORF	ENST00000489602.1_1_3:157213259-157223189:-|nuORF	ENST00000489602.1_1_3:157213259-157223189:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.2948913574219	2	426.25852	850.502486	-1.7278	-0.00073651	0.3488	0.00014868	-1.379	-0.00058783	426.2579770046078	74.548	0.10229	74.675	74.625	74.727	0.12711					4	2	2	0	0	0	0.4196	1	6892	6892		47.916	3.3845	1	17096			1859	12655	1260	1262	2231	2231					0.07125525825506429
APKGTVKI	8	Unmodified	_APKGTVKI_					0	0	0		ENSG00000163092|ENST00000409195|XIRP2;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.24176025390625	2	407.263271	812.511988	0.27407	0.00011162	-4.4514	-0.0018129	-4.1773	-0.0017013	407.2612805002943	15.92	0.16319	15.321	15.212	15.375	-0.59873					5	3	2	0	0	0	0.4196	1	63	63		17.365	0	1	27690			1860	5765	1261	1263	2232	2232					0.09823294111038194
APKKHQVN	8	Unmodified	_APKKHQVN_					0	0	0			REV__ENSG00000118579|ENST00000237380|MED28	REV__ENSG00000118579|ENST00000237380|MED28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	461.264892578125	2	461.266876	920.519199	-0.1247	-5.752E-05	-3.7143	-0.0017133	-3.839	-0.0017708	461.2649815864835	93.17	1.5107	93.239	92.756	94.266	0.06987					100	35	4	0	0	0	0.85277	1	9684	9684		25.45	2.4077	1	1215800	+		1861	18322	1262	1264	2233	2233					0.0557602671146924
APKKSVYR	8	Unmodified	_APKKSVYR_					0	0	0			REV__nc|ENSG00000102043|Q96EF0-2|MTMR8	REV__nc|ENSG00000102043|Q96EF0-2|MTMR8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.7821044921875	2	474.784902	947.55525	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.983	1	26.944	26.444	27.444	-0.038523								0	0	0	0.29498	1	1258	1258		26.796	0.10319	1		+		1862	17321	1263	1265	2234	2234					0.07937483888326824
APKLAVELELK	11	Unmodified	_APKLAVELELK_					0	0	0		ENST00000446309.1_1_7:86780824-86781686:-|nuORF	ENST00000446309.1_1_7:86780824-86781686:-|nuORF	ENST00000446309.1_1_7:86780824-86781686:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.91204833984375	3	404.251701	1209.73327	-0.043855	-1.7728E-05	1.4935	0.00060376	1.4497	0.00058603	404.2522594763602	30.701	0.47951	30.704	30.36	30.84	0.0037193					15	10	2	0	0	0	0.1747	1	2035	2035		34.087	0	1	68996			1863	11833	1264	1266	2235	2235					0.13679689296827746
APKLLIYG	8	Unmodified	_APKLLIYG_					0	0	0		nc|ENSG00000211653|P01703|IGLV1-40;nc|ENSG00000211645|A0A075B6I6|IGLV1-50	nc|ENSG00000211653|P01703|IGLV1-40	nc|ENSG00000211653|P01703|IGLV1-40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.771240234375	2	437.773471	873.53239	-1.5883	-0.00069529	-3.2181	-0.0014088	-4.8063	-0.0021041	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.86791	2	2228	2217;2228		39.021	15.985	1	1227500			1864	15228	1265	1267	2236;2237	2237					0.09056464770844741
APKLLIYG	8	Unmodified	_APKLLIYG_					0	0	0		nc|ENSG00000211653|P01703|IGLV1-40;nc|ENSG00000211645|A0A075B6I6|IGLV1-50	nc|ENSG00000211653|P01703|IGLV1-40	nc|ENSG00000211653|P01703|IGLV1-40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77166748046875	2	437.773471	873.53239	-0.60382	-0.00026434	-3.2012	-0.0014014	-3.8051	-0.0016658	437.771905353534	38.344	0.47827	38.686	38.418	38.896	0.34187					32	11	3	0	0	0	0.86791	1	3146	3146		28.254	4.0515	1	1117700			1865	15228	1265	1267	2238	2238					0.09056464770844741
APKLLIYG	8	Unmodified	_APKLLIYG_					0	0	0		nc|ENSG00000211653|P01703|IGLV1-40;nc|ENSG00000211645|A0A075B6I6|IGLV1-50	nc|ENSG00000211653|P01703|IGLV1-40	nc|ENSG00000211653|P01703|IGLV1-40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7709045410156	2	437.773471	873.53239	-2.0028	-0.00087676	-4.2532	-0.0018619	-6.256	-0.0027387	437.7717477191302	40.214	2.554	40.591	39.609	42.163	0.3765					138	67	4	0	0	0	0.82464	4	3451	3415;3427;3439;3451		39.021	22.317	1	10119000			1866	15228	1265	1267	2239;2240;2241;2242	2242					0.09056464770844741
APKSPILV	8	Unmodified	_APKSPILV_					0	0	0		nc|ENSG00000185013|Q96P26-3|NT5C1B;ENSG00000185013|ENST00000304081|NT5C1B;nc|ENSG00000185013|Q96P26-4|NT5C1B;nc|ENSG00000185013|Q96P26|NT5C1B	nc|ENSG00000185013|Q96P26-3|NT5C1B	nc|ENSG00000185013|Q96P26-3|NT5C1B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.766845703125	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.233	1	42.203	41.703	42.703	-0.029461								0	0	0	0.29816	1	3140	3140		38.806	0	1				1867	7668	1266	1268	2243	2243					0.0979217825380374
APKWGSTG	8	Unmodified	_APKWGSTG_					0	0	0			REV__ENST00000369124.4_1_1:150122230-150123238:+|nuORF	REV__ENST00000369124.4_1_1:150122230-150123238:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.20538330078125	2	402.205953	802.397353	-0.18632	-7.4938E-05	-0.51168	-0.0002058	-0.698	-0.00028074	402.20569515988933	98.659	2.0984	98.708	97.873	99.972	0.04982					129	48	4	0	0	0	0.89494	1	10456	10456		37.159	1.9584	1	1555200	+		1868	25614	1267	1269	2244	2244					-0.011750153709044753
APLALTPLPR	10	Unmodified	_APLALTPLPR_					0	0	0		ENST00000563592.5_1_15:73075590-73075839:+|nuORF	ENST00000563592.5_1_15:73075590-73075839:+|nuORF	ENST00000563592.5_1_15:73075590-73075839:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8282470703125	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.86763	1	10367	10367		26.693	2.4902	1	15330000			1869	13873	1268	1270	2245	2245					0.12214899127957324
APLARLNLRNN	11	Unmodified	_APLARLNLRNN_					0	0	0		ENSG00000179542|ENST00000356928|SLITRK4	ENSG00000179542|ENST00000356928|SLITRK4	ENSG00000179542|ENST00000356928|SLITRK4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92254638671875	3	417.914194	1250.72075	-1.8945	-0.00079174	-3.2546	-0.0013601	-5.149	-0.0021519	417.91207852758987	105.63	0.352	105.7	105.65	106	0.073112					15	8	3	0	0	0	0.17305	1	11201	11201		37.508	19.675	1	191820			1870	7277	1269	1271	2246	2246					0.1054209067717693
APLARRATG	9	Unmodified	_APLARRATG_					0	0	0			REV__ENST00000398645.6_1_11:66887172-66887355:+|nuORF	REV__ENST00000398645.6_1_11:66887172-66887355:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7725830078125	2	456.772326	911.530098	0.92134	0.00042084	-0.6003	-0.0002742	0.32104	0.00014664	456.77176380852353	89.91	2.1934	89.958	88.794	90.987	0.048164					112	51	4	0	0	0	0.78124	1	9283	9283		30.318	1.1682	1	1119200	+		1871	26211	1270	1272	2247	2247					0.07079429085740685
APLASVLVRLE	11	Unmodified	_APLASVLVRLE_					0	0	0			REV__ENST00000249373.7_1_7:128852402-128852711:+|nuORF	REV__ENST00000249373.7_1_7:128852402-128852711:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.3567504882812	2	584.358431	1166.70231	-0.075702	-4.4237E-05	-4.1912	-0.0024491	-4.2669	-0.0024934	584.3560423589818	92.438	3.1079	92.483	91.102	94.21	0.045448					194	73	3	0	0	0	0.732	1	9668	9668		26.063	1.5442	1	588330	+		1872	24277	1271	1273	2248	2248					0.12562535982624468
APLEPKSA	8	Unmodified	_APLEPKSA_					0	0	0			REV__ENST00000562955.2_2_1:43919018-43919642:+|nuORF	REV__ENST00000562955.2_2_1:43919018-43919642:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7286071777344	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.87064	1	7563	7563		29.15	0	1	159770	+		1873	28810	1272	1274	2249	2249					0.030704244603725783
APLERTKVY	9	Unmodified	_APLERTKVY_					0	0	0		ENSG00000157211|ENST00000530059|CDCP2	ENSG00000157211|ENST00000530059|CDCP2	ENSG00000157211|ENST00000530059|CDCP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8062744140625	2	538.808574	1075.60259	-1.7158	-0.0009245	-1.7822	-0.00096029	-3.4981	-0.0018848	538.8077132058876	90.429	2.6922	90.899	89.762	92.454	0.47068					154	66	4	0	0	0	0.78983	1	10652	10652		27.882	1.1893	1	808590			1874	5416	1273	1275	2250	2250					0.06781718368665679
APLGLGLAL	9	Unmodified	_APLGLGLAL_					0	0	0			REV__ENST00000417456.1_1_1:35442444-35442927:-|nuORF	REV__ENST00000417456.1_1_1:35442444-35442927:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2739562988281	2	412.765646	823.516739	-1.7521	-0.00072319	3.4462	0.0014225	1.6941	0.00069928	412.7678061230934	49.11	3.161	49.11	47.72	50.881	0					177	80	4	0	0	0	0.78292	1	3853	3853		29.842	0	1	570960	+		1875	26445	1274	1276	2251	2251					0.09792178253792372
APLKDLLLASL	11	Unmodified	_APLKDLLLASL_					0	0	0			REV__ENSG00000066735|ENST00000423312|KIF26A	REV__ENSG00000066735|ENST00000423312|KIF26A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.3672485351562	2	577.363182	1152.71181	2.1383	0.0012346	4.0903	0.0023616	6.2285	0.0035961	577.3654203694961	102.01	1.0705	102.33	101.93	103.01	0.32511					73	24	4	0	0	0	0.69248	1	12450	12450		32.751	4.669	1	1980600	+		1876	16527	1275	1277	2252	2252					0.141563042681355
APLKKTLC	8	Unmodified	_APLKKTLC_					0	0	0			REV__ENSG00000154736|ENST00000284987|ADAMTS5	REV__ENSG00000154736|ENST00000284987|ADAMTS5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2640380859375	2	437.264956	872.515359	-0.77238	-0.00033773	2.8096	0.0012285	2.0372	0.0008908	437.26614393764254	27.409	1.8866	27.234	26.703	28.59	-0.17559					105	43	3	0	0	0	0.81724	1	1559	1559		14.664	1.7049	1	457600	+		1877	20398	1276	1278	2253	2253					0.07400220893396181
APLKSKMIY	9	Unmodified	_APLKSKMIY_					0	0	0		ENSG00000172757|ENST00000308162|CFL1;nc|ENSG00000165410|Q9Y281-3|CFL2;ENSG00000165410|ENST00000298159|CFL2;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;ENSG00000125868|ENST00000246069|DSTN	ENSG00000172757|ENST00000308162|CFL1	ENSG00000172757|ENST00000308162|CFL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8055419921875	2	525.804445	1049.59434	1.081	0.00056841	-0.58279	-0.00030643	0.49824	0.00026198	525.8039522005927	35.505	1.2457	35.753	35.359	36.604	0.24769					70	31	3	0	0	0	0.065196	3	2705	2705;2716;2728		101.6	40.629	1	2077100			1878	6791	1277	1279	2254;2255;2256	2254					0.07152448127681055
APLKSKMIY	9	Unmodified	_APLKSKMIY_					0	0	0		ENSG00000172757|ENST00000308162|CFL1;nc|ENSG00000165410|Q9Y281-3|CFL2;ENSG00000165410|ENST00000298159|CFL2;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;ENSG00000125868|ENST00000246069|DSTN	ENSG00000172757|ENST00000308162|CFL1	ENSG00000172757|ENST00000308162|CFL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.8052368164062	2	525.804445	1049.59434	1.5637	0.00082219	-1.0865	-0.00057129	0.47719	0.00025091	525.803694485177	35.452	1.0651	35.833	35.288	36.353	0.3812					64	22	4	0	0	0	0.086373	3	2740	2717;2728;2740		95.815	47.9	1	2789400			1879	6791	1277	1279	2257;2258;2259	2259					0.07152448127681055
APLLEKNILGL	11	Unmodified	_APLLEKNILGL_					0	0	0			REV__ENST00000567644.5_1_15:74212283-74217700:-|nuORF	REV__ENST00000567644.5_1_15:74212283-74217700:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8670043945312	2	590.868631	1179.72271	-1.319	-0.00077937	-2.4341	-0.0014383	-3.7532	-0.0022176	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.65746	1	10920	10920		37.812	1.3648	1	81379000	+		1880	28881	1278	1280	2260	2260					0.14003706642415636
APLLRGLVLN	10	Unmodified	_APLLRGLVLN_					0	0	0			REV__ENSG00000178814|ENST00000618853|OPLAH	REV__ENSG00000178814|ENST00000618853|OPLAH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3403930664062	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.85939	1	10611	10611		23.042	2.0956	1	2530900	+		1881	22296	1279	1281	2261	2261					0.1408658801931324
APLLRGLVLN	10	Unmodified	_APLLRGLVLN_					0	0	0			REV__ENSG00000178814|ENST00000618853|OPLAH	REV__ENSG00000178814|ENST00000618853|OPLAH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.3401489257812	2	533.342584	1064.67061	-1.5064	-0.00080343	-2.9287	-0.001562	-4.4351	-0.0023654	533.3409139496441	99.132	2.1048	99.317	98.763	100.87	0.18582					141	48	4	0	0	0	0.86452	1	10238	10238		30.504	1.3541	1	1837700	+		1882	22296	1279	1281	2262	2262					0.1408658801931324
APLLRHSWP	9	Unmodified	_APLLRHSWP_					0	0	0			REV__ENST00000471540.5_1_21:46685245-46685350:-|nuORF	REV__ENST00000471540.5_1_21:46685245-46685350:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.8067626953125	2	538.803626	1075.5927	1.2439	0.00067023	4.4381	0.0023913	5.6821	0.0030615	538.8059653540298	90.569	3.7366	90.615	89.222	92.959	0.046448					245	88	4	0	0	0	0.7932	1	9381	9381		25.45	1.2474	1	805100	+		1883	27234	1280	1282	2263	2263					0.057925751539414705
APLLRWVL	8	Unmodified	_APLLRWVL_					0	0	0		ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.3078918457031	2	484.308013	966.601472	-0.09098	-4.4062E-05	-0.1126	-5.4535E-05	-0.20358	-9.8597E-05	484.3078570958868	81.122	1.1991	81.187	80.799	81.998	0.064384					70	27	4	0	0	0	0.41376	4	7976	7943;7964;7976;7989		79.939	14.136	1	905260			1884	1821	1281	1283	2264;2265;2266;2267	2266					0.11683548790404075
APLLRWVL	8	Unmodified	_APLLRWVL_					0	0	0		ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.3079528808594	2	484.308013	966.601472	0.42451	0.00020559	-0.80277	-0.00038879	-0.37826	-0.00018319	484.3075413936151	81.231	1.0947	81.171	80.797	81.892	-0.059692					66	25	3	0	0	0	0.41376	5	8198	8164;8198;8211;8223;8240		79.939	18.967	1	917240			1885	1821	1281	1283	2268;2269;2270;2271;2272	2269					0.11683548790404075
APLLRWVL	8	Unmodified	_APLLRWVL_					0	0	0		ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.30706787109375	2	484.308013	966.601472	-1.3098	-0.00063437	0.9731	0.00047128	-0.33674	-0.00016309	484.30838751003296	81.01	1.2956	81.066	80.732	82.028	0.055916					77	29	4	0	0	0	0.67263	6	8045	8034;8045;8057;8069;8080;8093		68.485	18.46	1	804700			1886	1821	1281	1283	2273;2274;2275;2276;2277;2278	2274					0.11683548790404075
APLLSIYV	8	Unmodified	_APLLSIYV_					0	0	0			REV__ENSG00000170276|ENST00000304298|HSPB2	REV__ENSG00000170276|ENST00000304298|HSPB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2604064941406	2	438.265479	874.516405	-1.5833	-0.00069392	-3.2181	-0.0014104	-4.8014	-0.0021043	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.86791	1	2191	2191		28.254	1.4582	1	11160000	+		1887	21645	1282	1284	2279	2279					0.07412758533939723
APLLSIYV	8	Unmodified	_APLLSIYV_					0	0	0			REV__ENSG00000170276|ENST00000304298|HSPB2	REV__ENSG00000170276|ENST00000304298|HSPB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26373291015625	2	438.265479	874.516405	-0.087987	-3.8562E-05	-3.7772	-0.0016554	-3.8652	-0.001694	438.2637207814046	39.241	0.97984	39.189	38.905	39.885	-0.052727					39	26	2	0	0	0	0.87276	1	2462	2462		29.842	1.5873	1	79258	+		1888	21645	1282	1284	2280	2280					0.07412758533939723
APLLSIYV	8	Unmodified	_APLLSIYV_					0	0	0			REV__ENSG00000170276|ENST00000304298|HSPB2	REV__ENSG00000170276|ENST00000304298|HSPB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7711486816406	2	438.265479	874.516405	-0.89092	-0.00039046	-2.2683	-0.00099411	-3.1592	-0.0013846	438.26402913335613	38.734	0.7003	39.076	38.658	39.358	0.34187					31	16	3	0	0	0	0.4196	1	3205	3205		37.028	7.1869	1	373570	+		1889	21645	1282	1284	2281	2281					0.07412758533939723
APLLSIYV	8	Unmodified	_APLLSIYV_					0	0	0			REV__ENSG00000170276|ENST00000304298|HSPB2	REV__ENSG00000170276|ENST00000304298|HSPB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77130126953125	2	438.265479	874.516405	-0.35618	-0.0001561	-3.1635	-0.0013865	-3.5197	-0.0015426	438.263821675976	38.561	0.45098	39.084	38.711	39.162	0.52235					19	10	3	0	0	0	0.4196	1	3205	3205		39.021	10.767	1	323480	+		1890	21645	1282	1284	2282	2282					0.07412758533939723
APLMILSGP	9	Unmodified	_APLMILSGP_					0	0	0		ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.7571716308594	2	449.756964	897.499375	0.20634	9.2801E-05	3.1537	0.0014184	3.36	0.0015112	449.7581894357544	52.275	0.61437	52.942	52.596	53.211	0.66729					27	14	2	0	0	0	0.76402	1	5218	5218		35.201	1.6851	1	726600			1891	13025	1283	1285	2283	2283					0.04652514656504536
APLMILSGP	9	Unmodified	_APLMILSGP_					0	0	0		ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	449.756964	897.499375	-1.6922	-0.0007611	4.6743	0.0021023	2.982	0.0013412	449.75915270773197	53.085	0.56852	53.085	52.716	53.285	0	0.022787	0.001067	NaN	35.201	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51511			1892	13025	1283	1285							0.04652514656504536
APLMILSGP	9	Unmodified	_APLMILSGP_					0	0	0		ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	449.756964	897.499375	-0.68255	-0.00030698	4.6124	0.0020745	3.9298	0.0017675	449.7588528795407	53.176	0.32476	53.152	52.98	53.305	-0.024754	0.089092	0.0010113	NaN	35.201	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44851			1893	13025	1283	1285							0.04652514656504536
APLMILSGP	9	Unmodified	_APLMILSGP_					0	0	0		ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	449.756964	897.499375	0.36016	0.00016199	2.4305	0.0010931	2.7906	0.0012551	449.7578097103451	53.316	0.63305	53.333	52.901	53.534	0.01749	0.2708	-0.00095133	NaN	35.201	24	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44238			1894	13025	1283	1285							0.04652514656504536
APLMILSGP	9	Unmodified	_APLMILSGP_					0	0	0		ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	449.756964	897.499375	0.32138	0.00014454	2.6111	0.0011744	2.9325	0.0013189	449.75794167765895	52.815	0.55614	52.886	52.755	53.311	0.070709	-0.17679	-0.00078887	NaN	35.201	19	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66106			1895	13025	1283	1285							0.04652514656504536
APLMILSGP	9	Unmodified	_APLMILSGP_					0	0	0		ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	ENST00000511805.5_1_4:3344715-3380011:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	449.756964	897.499375	-0.9214	-0.0004144	4.4247	0.00199	3.5033	0.0015756	449.7587933103912	52.554	0.81987	52.977	52.481	53.301	0.42348	-0.085217	0.00084252	NaN	35.201	34	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	607410			1896	13025	1283	1285							0.04652514656504536
APLPELSVKPN	11	Unmodified	_APLPELSVKPN_					0	0	0			REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8330078125	2	582.834788	1163.65502	0.11318	6.5963E-05	-3.7555	-0.0021889	-3.6424	-0.0021229	582.8325626554922	94.252	3.4585	94.298	93.323	96.781	0.046173					208	81	3	0	0	0	0.7144	1	9878	9878		29.17	1.0886	1	743970	+		1897	20560	1284	1286	2284	2284					0.07974256711622729
APLPELSVKPN	11	Unmodified	_APLPELSVKPN_					0	0	0			REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.8328247070312	2	582.834788	1163.65502	0.82789	0.00048252	-4.392	-0.0025598	-3.5641	-0.0020773	582.8322150120989	94.225	3.555	94.386	93.365	96.92	0.16119					184	84	3	0	0	0	0.68532	1	9617	9617		33.922	2.3918	1	780120	+		1898	20560	1284	1286	2285	2285					0.07974256711622729
APLPKHPL	8	Unmodified	_APLPKHPL_					0	0	0			REV__ENSG00000142949|ENST00000359947|PTPRF	REV__ENSG00000142949|ENST00000359947|PTPRF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.77374267578125	2	436.771263	871.527973	1.4261	0.00062287	3.9463	0.0017236	5.3724	0.0023465	436.7729940973578	27.77	1.2677	27.515	27.282	28.55	-0.25465					51	30	3	0	0	0	0.86791	1	1654	1654		28.254	8.8943	1	1148800	+		1899	19763	1285	1287	2286	2286					0.08707000347931171
APLPPPRASL	10	Unmodified	_APLPPPRASL_					0	0	0		ENST00000531472.1_1_19:52901204-52901724:+|nuORF	ENST00000531472.1_1_19:52901204-52901724:+|nuORF	ENST00000531472.1_1_19:52901204-52901724:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8037109375	2	509.805834	1017.59712	-0.054339	-2.7702E-05	-4.0902	-0.0020852	-4.1445	-0.0021129	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.86348	1	8561	8561		31.53	2.3598	1	2906900			1900	13361	1286	1288	2287	2287					0.08902039576844345
APLPPVAPL	9	Unmodified	_APLPPVAPL_					0	0	0		ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN;nc|ENSG00000188157|O00468-2|AGRN	ENSG00000188157|ENST00000379370|AGRN	ENSG00000188157|ENST00000379370|AGRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77117919921875	2	437.773471	873.53239	-0.99724	-0.00043656	-4.0891	-0.0017901	-5.0864	-0.0022267	437.77179407937126	38.831	0.76415	39.173	38.896	39.661	0.34187					66	17	5	0	0	0	0.7932	1	3229	3229		21.702	0	1	15326000			1901	7909	1287	1289	2288	2288					0.09056464770844741
APLQAIFKHM	10	Unmodified	_APLQAIFKHM_					0	0	0		nc|ENSG00000124782|Q92766-5|RREB1;nc|ENSG00000124782|Q92766-3|RREB1;nc|ENSG00000124782|Q92766|RREB1;ENSG00000124782|ENST00000379938|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.32080078125	2	578.320794	1154.62703	-0.45444	-0.00026281	0.42665	0.00024674	-0.027788	-1.607E-05	578.3212868289457	92.787	2.7225	92.787	91.761	94.484	0					150	62	3	0	0	0	0.8608	1	9070	9070		34.173	3.6689	1	310260			1902	3359	1288	1290	2289	2289					0.055906552505121
APLRLPPSPA	10	Unmodified	_APLRLPPSPA_					0	0	0		ENST00000579128.1_1_18:657682-669175:+|nuORF	ENST00000579128.1_1_18:657682-669175:+|nuORF	ENST00000579128.1_1_18:657682-669175:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8039855957031	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.8651	1	8437	8437		25.574	0	1	1874600			1903	14083	1289	1291	2290	2290					0.08902039576832976
APLRPPPAPP	10	Unmodified	_APLRPPPAPP_					0	0	0			REV__ENST00000261038.5_1_3:122513707-122513983:+|nuORF	REV__ENST00000261038.5_1_3:122513707-122513983:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8005676269531	2	506.800552	1011.58655	-0.49867	-0.00025273	1.4784	0.00074926	0.97973	0.00049653	506.80125930962566	45.611	0.78478	45.623	45.395	46.179	0.012058					40	21	2	0	0	0	0.86452	1	3344	3344		30.504	0	1	207840	+		1904	24377	1290	1292	2291	2291					0.08122056922411502
APLSRRLQAR	10	Unmodified	_APLSRRLQAR_					0	0	0			REV__ENSG00000134830|ENST00000595464|C5AR2	REV__ENSG00000134830|ENST00000595464|C5AR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	584.3562622070312	2	584.357088	1166.69962	-1.3402	-0.00078317	-0.53401	-0.00031205	-1.8742	-0.0010952	584.3568464329793	92.429	3.0691	92.615	91.162	94.231	0.18582					184	72	3	0	0	0	0.8651	1	9271	9271		25.574	1.0549	1	728420	+		1905	19171	1291	1293	2292	2292					0.122941253683166
APLTRLLLAAA	11	Unmodified	_APLTRLLLAAA_					0	0	0		ENST00000485682.6_2_11:2422258-2422552:+|nuORF	ENST00000485682.6_2_11:2422258-2422552:+|nuORF	ENST00000485682.6_2_11:2422258-2422552:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.3531494140625	2	555.355691	1108.69683	-0.45068	-0.00025029	-3.7051	-0.0020576	-4.1558	-0.0023079	555.3535032243398	101.3	2.2254	101.3	100.77	103	0					164	54	4	0	0	0	0.7342	1	10312	10312		25.574	3.6142	1	2945100			1906	12565	1292	1294	2293	2293					0.14682857190791765
APLYTLKGR	9	Unmodified	_APLYTLKGR_					0	0	0			REV__ENST00000477538.1_1_3:10184451-10184685:+|nuORF	REV__ENST00000477538.1_1_3:10184451-10184685:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8036193847656	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.78983	1	8192	8192		27.882	0	1	1874600	+		1907	27359	1293	1295	2294	2294					0.08902039576855714
APMQMELLGMA	11	Unmodified	_APMQMELLGMA_					0	0	0		ENST00000524031.1_1_6:109739377-109752485:-|nuORF	ENST00000524031.1_1_6:109739377-109752485:-|nuORF	ENST00000524031.1_1_6:109739377-109752485:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.2800903320312	2	596.282163	1190.54977	0.89644	0.00053453	-3.3678	-0.0020082	-2.4714	-0.0014737	596.2800276649783	104.38	3.1216	104.49	103.2	106.32	0.11684					143	78	2	0	0	0	0.50804	1	11011	11011		51.335	19.806	1	271760			1908	13210	1294	1296	2295	2295					-0.037880670723097865
APNLYVGN	8	Unmodified	_APNLYVGN_					0	0	0			REV__ENSG00000114374|ENST00000338981|USP9Y	REV__ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.2184753417969	2	424.21906	846.423567	-0.1837	-7.7928E-05	-1.1351	-0.00048152	-1.3188	-0.00055944	424.2185287134354	101.66	1.8082	101.68	101.04	102.85	0.01989					87	43	4	0	0	0	0.87922	1	10864	10864		31.955	1.4512	1	1878300	+		1909	18042	1295	1297	2296	2296					-0.005787461994259502
APPAESQVFL	10	Unmodified	_APPAESQVFL_					0	0	0			REV__ENST00000444184.5_1_9:132250990-132251182:+|nuORF	REV__ENST00000444184.5_1_9:132250990-132251182:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.7811279296875	2	529.779482	1057.54441	0.42447	0.00022488	2.5743	0.0013638	2.9988	0.0015887	529.7806756835065	55.443	1.0138	55.534	55.225	56.239	0.091167					76	34	3	0	0	0	0.86471	1	4637	4637		30.318	2.2362	1	514560	+		1910	26783	1296	1298	2297	2297					0.017940367233904908
APPFLKQV	8	Unmodified	_APPFLKQV_					0	0	0			REV__ENST00000246657.2_1_17:38710643-38710763:-|nuORF	REV__ENST00000246657.2_1_17:38710643-38710763:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2711486816406	2	450.271096	898.527639	-1.2372	-0.00055708	-0.035217	-1.5857E-05	-1.2724	-0.00057294	450.2709514885662	109.62	0.86229	109.74	109.65	110.51	0.12289					49	33	2	0	0	0	0.82464	1	11806	11806		21.702	0	1	789160	+		1911	24261	1297	1299	2298	2298					0.07431580628076517
APPHLGRK	8	Unmodified	_APPHLGRK_					0	0	0		ENST00000430767.8_1_17:75210489-75210606:+|nuORF	ENST00000430767.8_1_17:75210489-75210606:+|nuORF	ENST00000430767.8_1_17:75210489-75210606:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2634582519531	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.83466	1	3468	3468		23.037	2.0898	1	4268300			1912	11637	1298	1300	2299	2299					0.07144347919654592
APPIIVAPP	9	Unmodified	_APPIIVAPP_					0	0	0			REV__nc|ENSG00000060237|Q9H4A3-5|WNK1	REV__nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.770751953125	2	437.773471	873.53239	-1.5883	-0.00069529	-3.2181	-0.0014088	-4.8063	-0.0021041	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.7932	1	2266	2266		21.702	0	1	1227500	+		1913	29696	1299	1301	2300	2300					0.09056464770833372
APPKLHGR	8	Unmodified	_APPKLHGR_					0	0	0			REV__ENST00000481436.5_1_5:177642388-177652501:-|nuORF	REV__ENST00000481436.5_1_5:177642388-177652501:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2643127441406	2	438.264136	874.51372	-1.9277	-0.00084486	0.24503	0.00010739	-1.6827	-0.00073747	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.86288	1	2432	2432		26.796	10.323	1	3507500	+		1914	27439	1300	1302	2301	2301					0.07144347919643224
APPKLHGR	8	Unmodified	_APPKLHGR_					0	0	0			REV__ENST00000481436.5_1_5:177642388-177652501:-|nuORF	REV__ENST00000481436.5_1_5:177642388-177652501:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2623596191406	2	438.264136	874.51372	0.15263	6.689E-05	-1.9074	-0.00083592	-1.7547	-0.00076903	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.81548	1	2157	2157		20.482	0	1	11370000	+		1915	27439	1300	1302	2302	2302					0.07144347919643224
APPKPPLPG	9	Unmodified	_APPKPPLPG_					0	0	0		nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;ENSG00000107263|ENST00000683357|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.265625	2	437.263271	872.511988	1.7524	0.00076626	3.4445	0.0015062	5.1969	0.0022724	437.264848658338	24.04	1.4327	23.526	22.938	24.371	-0.51365					98	32	5	0	0	0	0.77546	1	1196	1196		31.955	1.4512	1	13559000			1916	2339	1301	1303	2303	2303					0.07063294111026153
APPKPPLPG	9	Unmodified	_APPKPPLPG_					0	0	0		nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;ENSG00000107263|ENST00000683357|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.265625	2	437.263271	872.511988	2.8534	0.0012477	2.2102	0.00096646	5.0637	0.0022142	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.69914	1	1332	1332		40.573	1.7665	1	21873000			1917	2339	1301	1303	2304	2304					0.07063294111026153
APPKPRVL	8	Unmodified	_APPKPRVL_					0	0	0			REV__ENST00000343217.6_1_2:241499837-241500047:+|nuORF	REV__ENST00000343217.6_1_2:241499837-241500047:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.255126953125	2	439.284537	876.554522	-1.507	-0.000662	-4.4245	-0.0019436	-5.9315	-0.0026056	439.28189323108995	67.471	0.16217	67.604	67.466	67.628	0.13326					6	5	2	0	0	0	0.4196	1	6009	6009		13.775	3.5906	1	26545	+		1918	25290	1302	1304	2305	2305					0.11130689239269032
APPKRKRKRVK	11	Unmodified	_APPKRKRKRVK_					0	0	0		ENST00000519559.1_1_8:52732913-52752014:-|nuORF;nc|ENSG00000168300|Q96MG8-2|PCMTD1;ENSG00000168300|ENST00000522514|PCMTD1	ENST00000519559.1_1_8:52732913-52752014:-|nuORF	ENST00000519559.1_1_8:52732913-52752014:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30224609375	3	455.308878	1362.90481	0.24103	0.00010974	-0.46068	-0.00020975	-0.21965	-0.00010001	455.3072969745237	43.311	0.25539	43.367	43.227	43.482	0.056744					7	5	2	0	0	0	0.18216	1	2989	2989		3.2113	1.6883	1	33347			1919	6390	1303	1305	2306	2306					0.2378690389853091
APPLPLPVA	9	Unmodified	_APPLPLPVA_					0	0	0			REV__ENSG00000141034|ENST00000268719|GID4	REV__ENSG00000141034|ENST00000268719|GID4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7707214355469	2	437.773471	873.53239	-1.5883	-0.00069529	-3.2181	-0.0014088	-4.8063	-0.0021041	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.7932	1	2276	2276		21.702	0	1	1227500	+		1920	19659	1304	1306	2307	2307					0.09056464770844741
APPLVCFK	8	Unmodified	_APPLVCFK_					0	0	0			REV__ENST00000555523.5_3_14:94547739-94567099:+|nuORF	REV__ENST00000555523.5_3_14:94547739-94567099:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7710876464844	2	437.746399	873.478245	-0.12183	-5.3332E-05	4.0147	0.0017574	3.8929	0.0017041	437.7482034853567	37.789	1.2156	38.102	37.453	38.669	0.31312					38	30	2	0	0	0	0.4196	1	3065	3065		37.028	34.099	1	287240	+		1921	28685	1305	1307	2308	2308					0.036445493476321644
APPPPRVV	8	Unmodified	_APPPPRVV_					0	0	0		nc|ENSG00000204116|Q5VXU3-2|CHIC1;ENSG00000204116|ENST00000373502|CHIC1	nc|ENSG00000204116|Q5VXU3-2|CHIC1	nc|ENSG00000204116|Q5VXU3-2|CHIC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.75494384765625	2	416.755613	831.496673	-0.10213	-4.2565E-05	-1.4773	-0.00061569	-1.5795	-0.00065826	416.75501653690895	52.816	0.66201	53.43	53.116	53.778	0.61436					50	15	4	0	0	0	0.82464	1	5342	5342		21.702	0	1	1457300			1922	8414	1306	1308	2309	2309					0.07418427313848497
APPRKVAML	9	Unmodified	_APPRKVAML_					0	0	0			REV__ENST00000306357.8_1_17:9153808-9153898:-|nuORF	REV__ENST00000306357.8_1_17:9153808-9153898:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7948913574219	2	491.796955	981.579357	-2.6015	-0.0012794	-1.6005	-0.00078712	-4.202	-0.0020665	491.7965338036507	61.872	0.72826	61.902	61.614	62.342	0.029575					42	30	2	0	0	0	0.77546	1	5767	5767		31.955	2.1133	1	169920	+		1923	24832	1307	1309	2310	2310					0.08783001050335315
APPSEGCF	8	Unmodified	_APPSEGCF_					0	0	0		ENST00000378566.5_1_9:35106854-35108271:-|nuORF	ENST00000378566.5_1_9:35106854-35108271:-|nuORF	ENST00000378566.5_1_9:35106854-35108271:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.17010498046875	2	404.170721	806.32689	-1.5918	-0.00064335	-0.19123	-7.7291E-05	-1.783	-0.00072064	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.82464	1	7329	7329		21.702	2.3424	1	6183600			1924	10871	1308	1310	2311	2311					-0.08402056750878728
APPSPPGRPI	10	Unmodified	_APPSPPGRPI_					0	0	0			REV__ENST00000553565.1_1_14:78197307-78203348:-|nuORF	REV__ENST00000553565.1_1_14:78197307-78203348:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7801208496094	2	494.782359	987.550165	-0.3637	-0.00017995	-3.733	-0.001847	-4.0967	-0.002027	494.78036117734723	86.114	3.3197	86.558	85.468	88.787	0.44331					170	80	3	0	0	0	0.80179	1	9989	9989		39.253	0	1	514260	+		1925	17206	1309	1311	2312	2312					0.05589180025708629
APPTRTVLC	9	Unmodified	_APPTRTVLC_					0	0	0		ENST00000450050.6_1_9:132399402-132399723:-|nuORF	ENST00000450050.6_1_9:132399402-132399723:-|nuORF	ENST00000450050.6_1_9:132399402-132399723:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.7178039550781	2	479.262945	956.511337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.52	1	78.614	78.114	79.114	0.0942								0	0	0	0.30053	1	7374	7374		30.504	0	1				1926	11887	1310	1312	2313	2313					0.031341313996676945
APQRPLSTFSP	11	Unmodified	_APQRPLSTFSP_					0	0	0		ENSG00000137310|ENST00000376257|TCF19	ENSG00000137310|ENST00000376257|TCF19	ENSG00000137310|ENST00000376257|TCF19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8240356445312	2	600.822212	1199.62987	-0.59314	-0.00035637	4.4207	0.002656	3.8275	0.0022997	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.68532	1	6762	6762		33.922	1.1711	1	825510			1927	4188	1311	1313	2314	2314					0.038042019090198664
APQRYKRD	8	Unmodified	_APQRYKRD_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7937622070312	2	517.280515	1032.54648	1.4833	0.00076727	1.6221	0.00083906	3.1053	0.0016063	517.2814481585972	88.026	0.51959	87.952	87.638	88.158	-0.074005					24	11	3	0	0	0	0.4196	1	9151	9151		31.955	0	1	101490	+		1928	22575	1312	1314	2315	2315					0.03150510251839478
APQTRLQGG	9	Unmodified	_APQTRLQGG_					0	0	0		ENST00000478135.1_1_7:150264503-150267091:+|nuORF	ENST00000478135.1_1_7:150264503-150267091:+|nuORF	ENST00000478135.1_1_7:150264503-150267091:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.25384521484375	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.64922	1	8489	8489		44.117	3.3386	1	1578600			1929	12375	1313	1315	2316	2316					0.027191324691784757
APRGPAKLTT	10	Unmodified	_APRGPAKLTT_					0	0	0		ENST00000249014.4_2_22:37964988-37965255:+|nuORF	ENST00000249014.4_2_22:37964988-37965255:+|nuORF	ENST00000249014.4_2_22:37964988-37965255:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.30029296875	2	506.300916	1010.58728	2.2899	0.0011594	-2.1661	-0.0010967	0.12389	6.2724E-05	506.2997439327226	96.465	1.166	96.408	95.894	97.06	-0.056389					72	26	3	0	0	0	0.86218	1	10351	10351		32.812	4.9302	1	446160			1930	9284	1314	1316	2317	2317					0.08240851571463281
APRKHPAV	8	Unmodified	_APRKHPAV_					0	0	0		nc|ENSG00000089505|Q8IZ96-8|CMTM1;ENSG00000089505|ENST00000379500|CMTM1	nc|ENSG00000089505|Q8IZ96-8|CMTM1	nc|ENSG00000089505|Q8IZ96-8|CMTM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2628173828125	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.81548	1	2815	2815		20.482	4.0087	1	3384400			1931	1625	1315	1317	2318	2318					0.07144347919643224
APRKKPIPKRS	11	Unmodified	_APRKKPIPKRS_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.2947998046875	3	426.610334	1276.80917	0.50751	0.00021651	-2.9912	-0.0012761	-2.4837	-0.0010596	426.94363100259295	75.658	0.15198	75.791	75.683	75.835	0.13326					5	3	2	0	0	0	0.17289	1	7053	7053		21.78	3.9473	1	25122	+		1932	23536	1316	1318	2319	2319					0.18184130987606295
APRKPGIFP	9	Unmodified	_APRKPGIFP_					0	0	0		ENSG00000174720|ENST00000344442|LARP7;nc|ENSG00000174720|Q4G0J3-3|LARP7	ENSG00000174720|ENST00000344442|LARP7	ENSG00000174720|ENST00000344442|LARP7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7961730957031	2	491.795269	981.575986	-0.86128	-0.00042357	1.3952	0.00068615	0.53392	0.00026258	491.79583711541846	45.285	1.262	45.254	44.708	45.97	-0.031067					74	28	3	0	0	0	0.76996	1	3725	3725		33.516	1.5607	1	480390			1933	6957	1317	1319	2320	2320					0.08446074267988024
APRLFMVL	8	Unmodified	_APRLFMVL_					0	0	0			REV__ENST00000420588.5_1_3:47476424-47476547:-|nuORF	REV__ENST00000420588.5_1_3:47476424-47476547:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.78240966796875	2	473.780773	945.546994	0.85611	0.00040561	3.719	0.001762	4.5751	0.0021676	473.78229812116575	21.435	0.72224	21.503	21.23	21.953	0.068251					45	22	3	0	0	0	0.86791	1	578	578		28.254	1.4582	1	91763	+		1934	26488	1318	1320	2321	2321					0.07204213647332836
APRPLPPHRC	10	Carbamidomethyl (C)	_APRPLPPHRC(Carbamidomethyl (C))_	APRPLPPHRC(1)		APRPLPPHRC(46)		0	1	0		ENST00000354386.10_1_14:58955358-58955499:+|nuORF	ENST00000354386.10_1_14:58955358-58955499:+|nuORF	ENST00000354386.10_1_14:58955358-58955499:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8240356445312	2	600.824566	1199.63458	-0.59314	-0.00035637	0.50251	0.00030192	-0.090624	-5.4449E-05	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.67571	1	6802	6802		45.972	7.2186	1	825510			1935	10337	1319	1321	2322	2322	134				0.04274807570800476
APRRLRRRRLL	11	Unmodified	_APRRLRRRRLL_					0	0	0		ENST00000377813.5_2_20:17660668-17662761:-|nuORF;ENST00000360807.8_2_20:17641169-17662761:-|nuORF	ENST00000377813.5_2_20:17660668-17662761:-|nuORF	ENST00000377813.5_2_20:17660668-17662761:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	488.7779846191406	3	488.327043	1461.9593	-0.81623	-0.00039858	-0.26201	-0.00012795	-1.0782	-0.00052653	488.66162007578436	21.28	0.30735	21.326	21.057	21.364	0.045401					28	13	3	0	0	0	0.18238	1	560	560		9.2118	3.513	1	75050			1936	10847	1320	1322	2323	2323					0.24679915769957006
APRRPVRPGG	10	Unmodified	_APRRPVRPGG_					0	0	0			REV__ENST00000301618.8_1_17:74865029-74878335:+|nuORF	REV__ENST00000301618.8_1_17:74865029-74878335:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8169555664062	2	531.817599	1061.62064	-0.033207	-1.766E-05	-0.82835	-0.00044053	-0.86155	-0.00045819	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.85438	1	8832	8832		16.473	0	1	1254600	+		1937	24768	1321	1323	2324	2324					0.09229898134049108
APRRRRPL	8	Unmodified	_APRRRRPL_					0	0	0			REV__nc|ENSG00000164338|Q8TED0-2|UTP15	REV__nc|ENSG00000164338|Q8TED0-2|UTP15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.3273620605469	2	511.328134	1020.64171	-0.73647	-0.00037658	-1.0633	-0.00054367	-1.7997	-0.00092025	511.3274858429374	97.597	1.7759	97.597	97.074	98.849	0					91	42	3	0	0	0	0.88915	1	9781	9781		35.201	1.6851	1	585290	+		1938	21073	1322	1324	2325	2325					0.13221908233549584
APRRTPKRK	9	Unmodified	_APRRTPKRK_					0	0	0			REV__ENST00000450873.6_2_7:66236917-66240338:+|nuORF	REV__ENST00000450873.6_2_7:66236917-66240338:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3532104492188	2	555.354348	1108.69414	0.32258	0.00017915	-2.3709	-0.0013167	-2.0484	-0.0011376	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.78983	1	10627	10627		27.882	9.5578	1	7708500	+		1939	26877	1323	1325	2326	2326					0.14414446576483897
APRRTPKRK	9	Unmodified	_APRRTPKRK_					0	0	0			REV__ENST00000450873.6_2_7:66236917-66240338:+|nuORF	REV__ENST00000450873.6_2_7:66236917-66240338:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3533325195312	2	555.354348	1108.69414	0.85673	0.00047579	-2.8194	-0.0015658	-1.9627	-0.00109	555.3526695275054	100.86	2.5278	101	100.46	102.99	0.14352					194	61	5	0	0	0	0.7932	1	10537	10537		23.042	0	1	5097700	+		1940	26877	1323	1325	2327	2327					0.14414446576483897
APRSIHKS	8	Unmodified	_APRSIHKS_					0	0	0		ENST00000529357.5_1_17:43475293-43487738:-|nuORF;ENST00000531735.5_1_17:43481393-43507645:-|nuORF;nc|ENSG00000159314|Q6ZUM4-2|ARHGAP27;nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27;ENSG00000159314|ENST00000685559|ARHGAP27	ENST00000529357.5_1_17:43475293-43487738:-|nuORF	ENST00000529357.5_1_17:43475293-43487738:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.2589416503906	2	448.259051	894.503549	-0.14447	-6.4758E-05	0.22166	9.9363E-05	0.077198	3.4605E-05	448.2590229245312	90.101	3.0472	90.17	88.225	91.272	0.068695					215	72	5	0	0	0	0.82658	1	9239	9239		21.96	1.9631	1	2722700			1941	5521	1324	1326	2328	2328					0.05207740194418875
APRSIHKS	8	Unmodified	_APRSIHKS_					0	0	0		ENST00000529357.5_1_17:43475293-43487738:-|nuORF;ENST00000531735.5_1_17:43481393-43507645:-|nuORF;nc|ENSG00000159314|Q6ZUM4-2|ARHGAP27;nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27;ENSG00000159314|ENST00000685559|ARHGAP27	ENST00000529357.5_1_17:43475293-43487738:-|nuORF	ENST00000529357.5_1_17:43475293-43487738:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.2589416503906	2	448.259051	894.503549	0.65386	0.0002931	-0.54104	-0.00024253	0.11282	5.0571E-05	448.25866214707224	89.921	4.4379	90.073	86.786	91.224	0.1519					231	105	5	0	0	0	0.82658	1	8995	8995		21.96	1.4781	1	2709200			1942	5521	1324	1326	2329	2329					0.05207740194418875
APRSSRVAP	9	Unmodified	_APRSSRVAP_					0	0	0			REV__AluSq2_dup55667|chr19:18682586-18682892:+|1.6297259041784136|0.0215574957983999|6.24|55.0|1|1|sense	REV__AluSq2_dup55667|chr19:18682586-18682892:+|1.6297259041784136|0.0215574957983999|6.24|55.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.76904296875	2	470.769783	939.525013	-0.0020308	-9.5605E-07	-1.4083	-0.00066297	-1.4103	-0.00066393	470.76898045127206	50.765	1.7665	50.763	50.349	52.115	-0.0020447					99	47	3	0	0	0	0.64922	1	4335	4335		44.117	2.6902	1	678630	+		1943	15390	1325	1327	2330	2330					0.052831252231385406
APRTDIPLKRL	11	Unmodified	_APRTDIPLKRL_					0	0	0		ENST00000368178.3_1_1:157716528-157737507:-|nuORF	ENST00000368178.3_1_1:157716528-157737507:-|nuORF	ENST00000368178.3_1_1:157716528-157737507:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3942260742188	2	640.395879	1278.7772	-0.70367	-0.00045063	-3.5698	-0.0022861	-4.2735	-0.0027367	640.3935337179228	53.682	0.9059	53.657	53.238	54.144	-0.024754					44	21	3	0	0	0	0.69248	1	4830	4830		32.751	2.4328	1	128690			1944	10583	1326	1328	2331	2331					0.1489671851386447
APRTTYLASCK	11	Carbamidomethyl (C)	_APRTTYLASC(Carbamidomethyl (C))K_	APRTTYLASC(1)K		APRTTYLASC(71)K		0	1	0		ENSG00000161996|ENST00000293879|WDR90;ENST00000547407.5_1_16:706280-710806:+|nuORF;ENST00000552683.5_1_16:707859-713132:+|nuORF;ENST00000546516.5_1_16:705169-713132:+|nuORF	ENSG00000161996|ENST00000293879|WDR90	ENSG00000161996|ENST00000293879|WDR90	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.324951171875	2	634.326805	1266.63906	0.5602	0.00035535	-3.0011	-0.0019037	-2.4409	-0.0015483	634.3248294256873	59.288	1.3651	59.402	58.945	60.31	0.11396					111	43	4	0	0	0	0.31977	1	5054	5054		70.816	24.844	1	2141400			1945	5661	1327	1329	2332	2332	70				0.016402272030290987
APSGPEPRTS	10	Unmodified	_APSGPEPRTS_					0	0	0			REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|158|3|sense	REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|158|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.746826171875	2	499.748713	997.482873	-0.10704	-5.3491E-05	-3.7851	-0.0018916	-3.8921	-0.0019451	499.74668293371275	68.165	0.87857	68.713	68.072	68.951	0.54819					48	20	3	0	0	0	0.85981	1	7504	7504		35.152	1.6364	1	737660	+		1946	29566	1328	1330	2333	2333					-0.015968949758985218
APSGRVACVSL	11	Unmodified	_APSGRVACVSL_					0	0	0			REV__ENST00000361320.4_1_10:68685815-68685899:+|nuORF	REV__ENST00000361320.4_1_10:68685815-68685899:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2816162109375	2	530.284408	1058.55426	-0.095665	-5.073E-05	-4.3682	-0.0023164	-4.4639	-0.0023671	530.2819114752125	76.375	0.64755	76.5	76.185	76.833	0.12485					36	21	2	0	0	0	0.32928	1	7153	7153		67.494	1.0644	1	146950	+		1947	25498	1329	1331	2334	2334					0.027329014571023436
APSITRQKLS	10	Unmodified	_APSITRQKLS_					0	0	0			REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF	REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8060913085938	2	550.824755	1099.63496	0.057763	3.1817E-05	1.389	0.0007651	1.4468	0.00079692	550.8256149093095	30.321	0.61164	30.231	29.875	30.486	-0.089544					22	13	2	0	0	0	0.37624	1	1947	1947		23.523	0	1	89849	+		1948	19933	1330	1332	2335	2335					0.0891250577167284
APSKLPVVRRE	11	Unmodified	_APSKLPVVRRE_					0	0	0		ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.8763427734375	2	626.380229	1250.7459	-0.22914	-0.00014353	-3.7311	-0.0023371	-3.9602	-0.0024806	626.3781425975275	58.421	0.84326	58.407	57.946	58.789	-0.013641					37	28	2	0	0	0	0.74002	1	5338	5338		15.333	9.7753	1	48648			1949	14183	1331	1333	2336	2336					0.13056145479754377
APSPAPTPTP	10	Unmodified	_APSPAPTPTP_					0	0	0			REV__ENSG00000108773|ENST00000225916|KAT2A	REV__ENSG00000108773|ENST00000225916|KAT2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2447509765625	2	468.245275	934.475997	-0.1136	-5.3193E-05	-0.96692	-0.00045276	-1.0805	-0.00050595	468.2447176903105	105.86	1.9486	105.84	105.27	107.22	-0.025146					119	45	4	0	0	0	0.85934	2	11455	11455;11491		35.618	6.4687	1	1917000	+		1950	17729	1332	1334	2337;2338	2337					0.006137921435083626
APSPAPTPTP	10	Unmodified	_APSPAPTPTP_					0	0	0			REV__ENSG00000108773|ENST00000225916|KAT2A	REV__ENSG00000108773|ENST00000225916|KAT2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2448425292969	2	468.245275	934.475997	2.7938	0.0013082	-3.9178	-0.0018345	-1.124	-0.00052631	468.2433163822993	105.83	2.1976	105.79	104.81	107.01	-0.03714					128	51	4	0	0	0	0.86452	1	11705	11705		30.504	2.6214	1	2085200	+		1951	17729	1332	1334	2339	2339					0.006137921435083626
APSPNQPTKHG	11	Unmodified	_APSPNQPTKHG_					0	0	0		nc|ENSG00000175029|P56545|CTBP2;nc|ENSG00000175029|P56545-3|CTBP2;ENSG00000175029|ENST00000309035|CTBP2	nc|ENSG00000175029|P56545|CTBP2	nc|ENSG00000175029|P56545|CTBP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.289794921875	2	567.288537	1132.56252	-0.36402	-0.0002065	-0.090658	-5.143E-05	-0.45467	-0.00025793	567.2884336656869	109.89	0.82098	109.89	109.64	110.46	0					54	33	2	0	0	0	0.68532	1	11413	11413		33.922	4.7516	1	469710			1952	6983	1333	1335	2340	2340					0.0015417169809097686
APSPPPPATT	10	Unmodified	_APSPPPPATT_					0	0	0			REV__nc|ENSG00000174938|Q6UXD5-6|SEZ6L2	REV__nc|ENSG00000174938|Q6UXD5-6|SEZ6L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.24468994140625	2	468.245275	934.475997	-0.1136	-5.3193E-05	-0.96692	-0.00045276	-1.0805	-0.00050595	468.2447176903105	105.86	1.9486	105.84	105.27	107.22	-0.025146					119	45	4	0	0	0	0.85934	1	11515	11515		35.618	7.736	1	1917000	+		1953	22027	1334	1336	2341	2341					0.006137921435083626
APSRWVRCHS	10	Unmodified	_APSRWVRCHS_					0	0	0			REV__nc|nan|Q96LS8|C2orf48	REV__nc|nan|Q96LS8|C2orf48	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.8011474609375	2	599.798549	1197.58254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.9	1	116.82	116.32	117.32	-0.075027								0	0	0	0.45132	1	12546	12546		13.454	0.64233	1		+		1954	30329	1335	1337	2342	2342					-0.00834355842948753
APSVVKISY	9	Unmodified	_APSVVKISY_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.2824401855469	2	482.279118	962.543683	0.6307	0.00030417	-0.34446	-0.00016612	0.28624	0.00013805	482.2786638500924	50.036	0.58035	50.483	50.225	50.805	0.44761					30	13	3	0	0	0	0.051853	1	4911	4911		107.01	44.029	1	797630			1955	1442	1336	1338	2343	2343					0.06091242074319325
APSVVKISY	9	Unmodified	_APSVVKISY_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.2834777832031	2	482.279118	962.543683	0.2306	0.00011122	-0.076067	-3.6686E-05	0.15454	7.453E-05	482.27887021649104	49.877	0.57741	50.722	50.477	51.055	0.84501					30	13	3	0	0	0	0.026116	1	4901	4901		120.87	44.094	1	777450			1956	1442	1336	1338	2344	2344					0.06091242074319325
APTIETVVL	9	Unmodified	_APTIETVVL_					0	0	0		ENSG00000106591|ENST00000223324|MRPL32	ENSG00000106591|ENST00000223324|MRPL32	ENSG00000106591|ENST00000223324|MRPL32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.77960205078125	2	471.778951	941.543348	-0.44647	-0.00021064	0.5048	0.00023815	0.058328	2.7518E-05	471.7790174036812	82.614	0.85271	82.673	82.295	83.148	0.059166					41	19	3	0	0	0	0.69914	1	8283	8283		40.573	1.7665	1	250090			1957	2304	1337	1339	2345	2345					0.070238223544834
APTLLRDRPLG	11	Unmodified	_APTLLRDRPLG_					0	0	0		ENST00000263512.5_1_X:153717326-153718904:-|nuORF	ENST00000263512.5_1_X:153717326-153718904:-|nuORF	ENST00000263512.5_1_X:153717326-153718904:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8587646484375	2	604.859129	1207.70371	0.082073	4.9642E-05	-1.0653	-0.00064433	-0.98318	-0.00059469	604.8584757159402	82.084	1.3276	82.558	81.718	83.045	0.47383					56	29	2	0	0	0	0.71921	1	9475	9475		19.263	0	1	3105600			1958	9462	1338	1340	2346	2346					0.10816170071370834
APTPLQLL	8	Unmodified	_APTPLQLL_					0	0	0			REV__ENST00000265351.11_1_6:43543606-43543798:-|nuORF	REV__ENST00000265351.11_1_6:43543606-43543798:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	427.3026428222656	2	426.763104	851.511654	-0.18243	-7.7853E-05	3.578	0.001527	3.3956	0.0014491	426.7646047622463	73.089	0.75597	73.129	72.712	73.468	0.040024					43	25	2	0	0	0	0.4196	1	6938	6938		26.796	0	1	100380	+		1959	24491	1339	1341	2347	2347					0.07995874391190227
APTPLQLL	8	Unmodified	_APTPLQLL_					0	0	0			REV__ENST00000265351.11_1_6:43543606-43543798:-|nuORF	REV__ENST00000265351.11_1_6:43543606-43543798:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.3026123046875	2	426.763104	851.511654	-0.63629	-0.00027155	4.0908	0.0017458	3.4545	0.0014742	426.76478337886203	72.96	0.79129	72.919	72.437	73.228	-0.040382					58	28	3	0	0	0	0.4196	1	7116	7116		26.796	5.0938	1	133150	+		1960	24491	1339	1341	2348	2348					0.07995874391190227
APTPPPHH	8	Unmodified	_APTPPPHH_					0	0	0			REV__nc|ENSG00000166145|O43278|SPINT1	REV__nc|ENSG00000166145|O43278|SPINT1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.294677734375	2	427.219395	852.424236	-0.2147	-9.1725E-05	0.94838	0.00040517	0.73368	0.00031344	427.2217870368271	76.66	0.11262	76.612	76.528	76.641	-0.048264					5	3	2	0	0	0	0.4196	1	7601	7601		15.636	12.226	1	15501	+		1961	21255	1340	1342	2349	2349					-0.007879067597286848
APTPSQFDG	9	Unmodified	_APTPSQFDG_					0	0	0		ENST00000483032.1_1_1:155726496-155726922:-|nuORF	ENST00000483032.1_1_1:155726496-155726922:-|nuORF	ENST00000483032.1_1_1:155726496-155726922:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.2147216796875	2	460.211432	918.408311	1.4166	0.00065195	3.9366	0.0018117	5.3533	0.0024636	460.21371182580657	107.11	0.79639	107.22	106.86	107.65	0.10396					90	28	5	0	0	0	0.78536	1	13052	13052		29.15	1.2673	1	1570100			1962	12500	1341	1343	2350	2350					-0.05415657787273176
APVEVTHNF	9	Unmodified	_APVEVTHNF_					0	0	0		nc|ENSG00000005007|Q92900|UPF1;ENSG00000005007|ENST00000262803|UPF1	nc|ENSG00000005007|Q92900|UPF1	nc|ENSG00000005007|Q92900|UPF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.253662109375	2	507.256174	1012.49779	-1.0958	-0.00055586	-0.68081	-0.00034534	-1.7766	-0.0009012	507.25566771598574	43.174	0.57211	43.607	43.295	43.867	0.4334					29	13	3	0	0	0	0.24527	1	3897	3897		69.628	27.231	1	1377100			1963	671	1342	1344	2351	2351					-0.007954031079066226
APVEVTHNF	9	Unmodified	_APVEVTHNF_					0	0	0		nc|ENSG00000005007|Q92900|UPF1;ENSG00000005007|ENST00000262803|UPF1	nc|ENSG00000005007|Q92900|UPF1	nc|ENSG00000005007|Q92900|UPF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.2559814453125	2	507.256174	1012.49779	-1.0233	-0.00051909	-0.12933	-6.5602E-05	-1.1527	-0.00058469	507.2558979317375	42.994	0.68537	43.691	43.422	44.107	0.69754					29	16	3	0	0	0	0.14236	2	3879	3868;3879		85.161	24.22	1	1347400			1964	671	1342	1344	2352;2353	2353					-0.007954031079066226
APVGHSGIWSF	11	Unmodified	_APVGHSGIWSF_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.2901611328125	2	579.290548	1156.56654	-1.064	-0.00061636	0.98881	0.00057281	-0.075174	-4.3548E-05	579.2908761033775	65.185	0.64348	65.571	65.075	65.719	0.38615					35	15	3	0	0	0	0.29693	3	7063	7052;7063;7074		74.255	16.025	1	418800			1965	14916	1343	1345	2354;2355;2356	2355					-0.005477388081999379
APVILLPQ	8	Unmodified	_APVILLPQ_					0	0	0		chr14:73091357-73096915|23|12.7|0.14|6.49|+|0|TE_info:AluJb,AluJb_dup93368,Alu,SINE,donor,-,73091245,73091357|None,RBM25|2	chr14:73091357-73096915|23|12.7|0.14|6.49|+|0|TE_info:AluJb,AluJb_dup93368,Alu,SINE,donor,-,73091245,73091357|None,RBM25|2	chr14:73091357-73096915|23|12.7|0.14|6.49|+|0|TE_info:AluJb,AluJb_dup93368,Alu,SINE,donor,-,73091245,73091357|None,RBM25|2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2949523925781	2	425.773471	849.53239	-0.18359	-7.8168E-05	-1.8721	-0.0007971	-2.0557	-0.00087526	425.77485842849785	76.443	0.35523	76.492	76.296	76.652	0.049194					12	11	2	0	0	0	0.4196	1	7384	7384		13.775	0	1	21431			1966	176	1344	1346	2357	2357					0.10160464770854105
APVLAKLR	8	Unmodified	_APVLAKLR_					0	0	0		nc|ENSG00000106290|P49848-4|TAF6;nc|ENSG00000106290|P49848-2|TAF6;ENSG00000106290|ENST00000453269|TAF6;nc|ENSG00000106290|P49848-3|TAF6	nc|ENSG00000106290|P49848-4|TAF6	nc|ENSG00000106290|P49848-4|TAF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.289306640625	2	434.292362	866.570172	0.055393	2.4057E-05	3.1394	0.0013634	3.1948	0.0013875	434.2922901424792	77.385	1.709	77.791	77.3	79.009	0.4053					103	41	4	0	0	0	0.85277	1	8831	8831		25.45	1.2474	1	514170			1967	2288	1345	1347	2358	2358					0.13154975756310705
APVLAKLR	8	Unmodified	_APVLAKLR_					0	0	0		nc|ENSG00000106290|P49848-4|TAF6;nc|ENSG00000106290|P49848-2|TAF6;ENSG00000106290|ENST00000453269|TAF6;nc|ENSG00000106290|P49848-3|TAF6	nc|ENSG00000106290|P49848-4|TAF6	nc|ENSG00000106290|P49848-4|TAF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.2912902832031	2	434.292362	866.570172	0.20945	9.0961E-05	-0.029853	-1.2965E-05	0.17959	7.7996E-05	434.2922426111118	76.525	1.2695	77.093	76.184	77.453	0.56836					55	36	2	0	0	0	0.884	1	8711	8711		33.516	5.2613	1	779900			1968	2288	1345	1347	2359	2359					0.13154975756310705
APVLLRGSPL	10	Unmodified	_APVLLRGSPL_					0	0	0			REV__ENSG00000204099|ENST00000407683|NEU4	REV__ENSG00000204099|ENST00000407683|NEU4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.8201904296875	2	511.821484	1021.62842	-0.12593	-6.4454E-05	-1.4771	-0.00075603	-1.6031	-0.00082048	511.8205326826124	82.197	0.9657	82.623	82.159	83.124	0.42646					55	23	3	0	0	0	0.86718	1	9491	9491		27.882	3.3631	1	1502000	+		1969	23455	1346	1348	2360	2360					0.11846612610952434
APVLRAKL	8	Unmodified	_APVLRAKL_					0	0	0			REV__nc|ENSG00000144369|Q6P995-2|FAM171B	REV__nc|ENSG00000144369|Q6P995-2|FAM171B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.2896423339844	2	434.292362	866.570172	0.19803	8.6003E-05	2.6646	0.0011572	2.8627	0.0012432	434.2922263287595	77.142	1.7516	77.711	77.417	79.168	0.56836					96	41	4	0	0	0	0.884	1	8846	8846		33.516	3.0119	1	559930	+		1970	19885	1347	1349	2361	2361					0.13154975756299336
APVPTGEVY	9	Unmodified	_APVPTGEVY_					0	0	0		nc|ENSG00000127022|P27824-2|CANX;ENSG00000127022|ENST00000247461|CANX	nc|ENSG00000127022|P27824-2|CANX	nc|ENSG00000127022|P27824-2|CANX	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.24542236328125	2	466.739825	931.465098	-0.46846	-0.00021865	-0.68972	-0.00032192	-1.1582	-0.00054057	466.73979063808383	52.687	0.78474	53.111	52.765	53.55	0.42348					30	18	3	0	0	0	0.18372	1	5291	5291		88.643	46.168	1	1354700			1971	3481	1348	1350	2362	2362					-0.0033761023076976926
APVPVELD	8	Unmodified	_APVPVELD_					0	0	0			REV__ENSG00000147174|ENST00000373696|GCNA	REV__ENSG00000147174|ENST00000373696|GCNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.22540283203125	2	420.229094	838.443634	-0.26172	-0.00010998	-2.7119	-0.0011396	-2.9737	-0.0012496	420.2278427718772	76.28	2.2676	76.231	74.595	76.863	-0.048271					136	69	3	0	0	0	0.87922	1	7449	7449		31.955	5.1588	1	253020	+		1972	20059	1349	1351	2363	2363					0.017950047405179248
APVQGKRNRLA	11	Unmodified	_APVQGKRNRLA_					0	0	0			REV__ENSG00000105270|ENST00000360535|CLIP3	REV__ENSG00000105270|ENST00000360535|CLIP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9091796875	3	403.910672	1208.71019	1.6372	0.00066129	-2.878	-0.0011624	-1.2408	-0.00050115	403.90940390905183	68.69	2.5103	69.075	67.299	69.809	0.38482					145	63	3	0	0	0	0.70584	2	7381	7381;7574		30.569	3.4874	1	351280	+		1973	17522	1350	1352	2364;2365	2364					0.11418108022735396
APVRRWRHRKR	11	Unmodified	_APVRRWRHRKR_					0	0	0			REV__ENST00000460670.5_1_19:37096371-37096590:+|nuORF	REV__ENST00000460670.5_1_19:37096371-37096590:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.9740905761719	3	506.643143	1516.9076	2.951	0.0014951	-2.9662	-0.0015028	-0.01519	-7.6958E-06	506.64177152117765	112.34	0.54541	112.31	112.19	112.73	-0.025421					20	11	3	0	0	0	0.18216	1	12406	12406		14.086	12.938	1	379820	+		1974	27010	1351	1353	2366	2366					0.16982172076041024
APVYSPYTPI	10	Unmodified	_APVYSPYTPI_					0	0	0			REV__nc|ENSG00000179348|P23769-2|GATA2	REV__nc|ENSG00000179348|P23769-2|GATA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.2869873046875	2	554.289682	1106.56481	-1.378	-0.00076384	-1.117	-0.00061917	-2.4951	-0.001383	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.86589	1	2492	2492		29.15	3.6994	1	328550	+		1975	30066	1352	1354	2367	2367					0.01579207383178982
APWLLGRAV	9	Unmodified	_APWLLGRAV_					0	0	0		ENST00000373055.5_1_1:38158222-38158438:+|nuORF	ENST00000373055.5_1_1:38158222-38158438:+|nuORF	ENST00000373055.5_1_1:38158222-38158438:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7960510253906	2	491.795269	981.575986	-0.17405	-8.5598E-05	1.0809	0.00053159	0.90686	0.00044599	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.7932	1	3393	3393		25.45	0	1	2994900			1976	10725	1353	1355	2368	2368					0.08446074267999393
APWMEREGP	9	Unmodified	_APWMEREGP_					0	0	0		nc|ENSG00000206341|P01893|HLA-H	nc|ENSG00000206341|P01893|HLA-H	nc|ENSG00000206341|P01893|HLA-H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7464599609375	2	536.747659	1071.48076	-0.65993	-0.00035422	-2.9397	-0.0015779	-3.5996	-0.0019321	536.7459714608132	69.256	1.875	69.803	69.324	71.199	0.54694					117	48	5	0	0	0	0.7932	1	7724	7724		26.693	1.1189	1	5310600			1977	15225	1354	1356	2369	2369					-0.05211646985367224
APYQGPALYVY	11	Unmodified	_APYQGPALYVY_					0	0	0		ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3196411132812	2	621.313689	1240.61282	-0.2911	-0.00018087	0.50684	0.00031491	0.21574	0.00013404	621.3138090299801	68.828	0.73877	68.854	68.562	69.301	0.02636					77	31	4	0	0	0	0.61774	1	6486	6486		42.396	1.618	1	456890			1978	5146	1355	1357	2370	2370					0.0021428130326057726
AQAGPGWLPG	10	Unmodified	_AQAGPGWLPG_					0	0	0		ENST00000395008.6_1_3:52005483-52005546:-|nuORF	ENST00000395008.6_1_3:52005483-52005546:-|nuORF	ENST00000395008.6_1_3:52005483-52005546:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2475280761719	2	477.245609	952.476666	0.42784	0.00020419	1.5249	0.00072774	1.9527	0.00093193	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.84112	1	7102	7102		37.159	1.9584	1	2278400			1979	11084	1356	1358	2371	2371					-0.0014736841676494805
AQAVTSLLRLH	11	Unmodified	_AQAVTSLLRLH_					0	0	0			REV__ENSG00000065485|ENST00000316218|PDIA5	REV__ENSG00000065485|ENST00000316218|PDIA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5748291015625	3	403.575178	1207.70371	-1.7546	-0.00070812	0.79854	0.00032227	-0.95608	-0.00038585	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.56641	1	7954	7954		47.228	8.4741	1	1090300	+		1980	16501	1357	1359	2372	2372					0.10816170071370834
AQAVTSLLRLH	11	Unmodified	_AQAVTSLLRLH_					0	0	0			REV__ENSG00000065485|ENST00000316218|PDIA5	REV__ENSG00000065485|ENST00000316218|PDIA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5748291015625	3	403.575178	1207.70371	0.82597	0.00033334	-2.2428	-0.00090514	-1.4168	-0.0005718	403.5742849619775	82.098	2.6206	82.524	81.753	84.373	0.42646					188	63	3	0	0	0	0.6396	1	9499	9499		39.873	2.365	1	14382000	+		1981	16501	1357	1359	2373	2373					0.10816170071370834
AQAVTSLLRLH	11	Unmodified	_AQAVTSLLRLH_					0	0	0			REV__ENSG00000065485|ENST00000316218|PDIA5	REV__ENSG00000065485|ENST00000316218|PDIA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57476806640625	3	403.575178	1207.70371	-0.098768	-3.986E-05	-1.4245	-0.00057487	-1.5232	-0.00061473	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.69071	1	9635	9635		33.039	0.28887	1	16485000	+		1982	16501	1357	1359	2374	2374					0.10816170071370834
AQAYHRLR	8	Unmodified	_AQAYHRLR_					0	0	0		ENSG00000276231|ENST00000619866|PIK3R6	ENSG00000276231|ENST00000619866|PIK3R6	ENSG00000276231|ENST00000619866|PIK3R6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.784912109375	2	507.783225	1013.5519	1.1228	0.00057015	2.1573	0.0010955	3.2801	0.0016656	507.7842156196741	16.847	0.61078	16.236	16.048	16.659	-0.6107					30	13	3	0	0	0	0.89962	1	180	180		38.806	1.647	1	1020700			1983	9011	1358	1360	2375	2375					0.04566233834327704
AQDTKADGNEV	11	Unmodified	_AQDTKADGNEV_					0	0	0			REV__ENST00000555320.1_1_14:81288942-81289137:+|nuORF	REV__ENST00000555320.1_1_14:81288942-81289137:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.0604248046875	2	574.264924	1146.5153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.48	1	78.48	77.98	78.98	0								0	0	0	0.56276	1	7180	7180		40.058	2.2467	1		+		1984	28681	1359	1361	2376	2376					-0.05210152363565612
AQELSNMDPPL	11	Unmodified	_AQELSNMDPPL_					0	0	0			REV__ENST00000569647.1_1_16:50059214-50060668:+|nuORF	REV__ENST00000569647.1_1_16:50059214-50060668:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	607.7865600585938	2	607.789721	1213.56489	-0.99677	-0.00060583	-1.5932	-0.00096834	-2.59	-0.0015742	607.7886398141796	54.019	0.6017	54.041	53.745	54.346	0.022537					41	16	3	0	0	0	0.36477	1	4807	4807		62.107	3.8775	1	517990	+		1985	28916	1360	1362	2377	2377					-0.03335160679125693
AQFKKSILVYL	11	Unmodified	_AQFKKSILVYL_					0	0	0			REV__ENSG00000183671|ENST00000621141|CMKLR2	REV__ENSG00000183671|ENST00000621141|CMKLR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.267578125	3	437.267463	1308.78056	0.29718	0.00012995	0.67877	0.0002968	0.97595	0.00042675	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.74022	1	4207	4207		24.232	2.4514	1	4533800	+		1986	22620	1361	1363	2378	2378					0.1385196856786024
AQGPVSGNH	9	Unmodified	_AQGPVSGNH_					0	0	0		ENST00000493892.5_1_1:26310515-26324519:-|nuORF	ENST00000493892.5_1_1:26310515-26324519:-|nuORF	ENST00000493892.5_1_1:26310515-26324519:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.7093811035156	2	433.709391	865.404229	2.0792	0.00090175	-1.7988	-0.00078014	0.2804	0.00012161	433.70846338863225	18.813	1.3077	18.738	18.445	19.753	-0.074974					100	50	3	0	0	0	0.12652	1	369	369		87.754	5.4493	1	1070700			1987	12741	1362	1364	2379	2379					-0.033857024903227284
AQGPVSGNH	9	Unmodified	_AQGPVSGNH_					0	0	0		ENST00000493892.5_1_1:26310515-26324519:-|nuORF	ENST00000493892.5_1_1:26310515-26324519:-|nuORF	ENST00000493892.5_1_1:26310515-26324519:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	433.709391	865.404229	-2.1644	-0.0009387	2.3932	0.001038	0.22887	9.9262E-05	433.7103012846013	18.76	0.59038	18.76	18.488	19.078	0	0.044547	0.0017858	NaN	87.754	44	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	177000			1988	12741	1362	1364							-0.033857024903227284
AQGPVSGNH	9	Unmodified	_AQGPVSGNH_					0	0	0		ENST00000493892.5_1_1:26310515-26324519:-|nuORF	ENST00000493892.5_1_1:26310515-26324519:-|nuORF	ENST00000493892.5_1_1:26310515-26324519:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	433.709391	865.404229	-1.7003	-0.00073742	2.0093	0.00087143	0.30899	0.00013401	433.71010653206514	18.655	0.86544	18.699	18.348	19.214	0.044048	-0.016516	0.0014527	NaN	87.754	86	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310750			1989	12741	1362	1364							-0.033857024903227284
AQGPVSGNH	9	Unmodified	_AQGPVSGNH_					0	0	0		ENST00000493892.5_1_1:26310515-26324519:-|nuORF	ENST00000493892.5_1_1:26310515-26324519:-|nuORF	ENST00000493892.5_1_1:26310515-26324519:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	433.709391	865.404229	0.013911	6.0335E-06	0.21278	9.2286E-05	0.22669	9.8319E-05	433.7093420145401	18.624	0.63335	18.69	18.464	19.097	0.066296	-0.02552	-0.0001056	NaN	87.754	67	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	640620			1990	12741	1362	1364							-0.033857024903227284
AQGPVSGNH	9	Unmodified	_AQGPVSGNH_					0	0	0		ENST00000493892.5_1_1:26310515-26324519:-|nuORF	ENST00000493892.5_1_1:26310515-26324519:-|nuORF	ENST00000493892.5_1_1:26310515-26324519:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	433.709391	865.404229	0.43508	0.0001887	-0.045136	-1.9576E-05	0.38994	0.00016912	433.7091690770371	19.33	0.90084	18.701	18.358	19.259	-0.62961	-0.014558	-0.00032932	NaN	87.754	44	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	324290			1991	12741	1362	1364							-0.033857024903227284
AQIHMRARRLL	11	Unmodified	_AQIHMRARRLL_					0	0	0			REV__chr5:177310006-177310426|59|12.49|0.49|4.66|-|0|None,MXD3|1	REV__chr5:177310006-177310426|59|12.49|0.49|4.66|-|0|None,MXD3|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6079406738281	3	455.606707	1363.79829	-0.02024	-9.2214E-06	3.7646	0.0017152	3.7444	0.001706	455.608304720296	65.806	3.5163	66.359	63.877	67.393	0.5526					173	94	4	0	0	0	0.68431	1	7221	7221		34.087	3.0184	1	1863500	+		1992	15853	1363	1365	2380	2380					0.13094405341712445
AQILKDMVDE	10	Unmodified	_AQILKDMVDE_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	581.2922973632812	2	581.294639	1160.57472	-0.5716	-0.00033227	-1.1147	-0.00064796	-1.6863	-0.00098023	581.2926594990687	36.852	0.7402	37.134	36.724	37.464	0.28173					52	17	4	0	0	0	0.86106	1	2908	2908		33.922	2.3918	1	489060	+		1993	19832	1364	1366	2381	2381					0.0008602732623330667
AQKENSYPW	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))AQKENSYPW_					1	0	0		ENST00000582368.5_1_17:8113355-8113542:-|nuORF;chr17:8206639-8207318|57|16.14|0.16|6.63|-|ENST00000580998|AURKB,AURKB;nc|ENSG00000178999|Q96GD4-3|AURKB;ENST00000584561.1_1_17:8110402-8113858:-|nuORF;nc|ENSG00000178999|Q96GD4-2|AURKB;chr17:8206934-8207318|62|33.32|0.54|5.95|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB	ENST00000582368.5_1_17:8113355-8113542:-|nuORF	ENST00000582368.5_1_17:8113355-8113542:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.7694702148438	2	582.769645	1163.52474	-0.85917	-0.0005007	0.63435	0.00036968	-0.22482	-0.00013102	582.7699033994918	52.338	0.66209	52.351	52.086	52.748	0.012436					33	14	3	0	0	0	0.35373	1	4559	4559		60.972	9.6365	1	167640			1994	245	1365	1367	2382	2382					-0.05048339287372983
AQKLAKKSH	9	Unmodified	_AQKLAKKSH_					0	0	0			REV__ENSG00000143970|ENST00000435504|ASXL2	REV__ENSG00000143970|ENST00000435504|ASXL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.8095397949219	2	505.808908	1009.60326	0.96123	0.0004862	-0.61337	-0.00031025	0.34786	0.00017595	505.808486899562	22.428	0.48369	21.817	21.592	22.076	-0.6107					25	10	3	0	0	0	0.41566	1	918	918		56.721	8.8055	1	239310	+		1995	19860	1366	1368	2383	2383					0.098845578083683
AQKLVLPSQSA	11	Unmodified	_AQKLVLPSQSA_					0	0	0			REV__nc|ENSG00000182979|Q13330-3|MTA1	REV__nc|ENSG00000182979|Q13330-3|MTA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	571.3309326171875	2	571.332413	1140.65027	1.4665	0.00083786	-3.9942	-0.002282	-2.5277	-0.0014442	571.3301291539012	102.21	2.4124	102.26	101.34	103.75	0.043198					126	58	4	0	0	0	0.732	1	11039	11039		26.063	3.0209	1	2089600	+		1996	22564	1367	1369	2384	2384					0.08557372568861865
AQLFAPKT	8	Unmodified	_AQLFAPKT_					0	0	0		nc|ENSG00000100241|O95248|SBF1;ENSG00000100241|ENST00000380817|SBF1;nc|ENSG00000100241|O95248-4|SBF1	nc|ENSG00000100241|O95248|SBF1	nc|ENSG00000100241|O95248|SBF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77081298828125	2	438.252903	874.491253	-1.6369	-0.00071739	2.2347	0.00097938	0.59781	0.00026199	438.2536823626638	42.643	0.61996	43.077	42.924	43.544	0.4334					20	14	2	0	0	0	0.4196	1	3808	3808		11.511	0	1	192720			1997	1812	1368	1370	2385	2385					0.048987037313850124
AQLGIGRKLRL	11	Unmodified	_AQLGIGRKLRL_					0	0	0		ENST00000522240.1_1_8:87526921-87540804:+|nuORF	ENST00000522240.1_1_8:87526921-87540804:+|nuORF	ENST00000522240.1_1_8:87526921-87540804:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.9346618652344	3	408.934818	1223.78262	-0.40513	-0.00016567	-1.2775	-0.0005224	-1.6826	-0.00068807	408.93419492765196	16.398	0.31886	16.318	16.169	16.488	-0.080017					13	11	2	0	0	0	0.77205	1	114	114		17.167	1.16	1	27997			1998	13185	1369	1371	2386	2386					0.17968442096298531
AQLIKTYTIL	10	Unmodified	_AQLIKTYTIL_					0	0	0			REV__ENSG00000172209|ENST00000304402|GPR22	REV__ENSG00000172209|ENST00000304402|GPR22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3541870117188	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.86899	1	12923	12923		14.137	1.3254	1	3937500	+		1999	21811	1370	1372	2387	2387					0.12132017751082458
AQLLQGYRWCL	11	Unmodified	_AQLLQGYRWCL_					0	0	0		nc|ENSG00000100241|O95248|SBF1;ENSG00000100241|ENST00000380817|SBF1;nc|ENSG00000100241|O95248-4|SBF1	nc|ENSG00000100241|O95248|SBF1	nc|ENSG00000100241|O95248|SBF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.9053039550781	3	450.904419	1349.69143	0.12315	5.5528E-05	1.8219	0.00082148	1.945	0.00087701	450.90517030653115	20.017	0.68983	19.388	19.028	19.718	-0.62961					35	14	4	0	0	0	0.67762	1	594	594		35.178	6.6015	1	101040			2000	1812	1371	1373	2388	2388					0.03056810336693161
AQLLRDIFVF	10	Unmodified	_AQLLRDIFVF_					0	0	0		ENSG00000165923|ENST00000525123|AGBL2;ENST00000529712.5_1_11:47690447-47736202:-|nuORF;nc|ENSG00000165923|Q5U5Z8-2|AGBL2	ENSG00000165923|ENST00000525123|AGBL2	ENSG00000165923|ENST00000525123|AGBL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.35498046875	2	611.353148	1220.69174	0.21559	0.0001318	4.4197	0.002702	4.6352	0.0028338	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.86218	1	9787	9787		32.812	1.2826	1	5379900			2001	6138	1372	1374	2389	2389					0.09022553328168215
AQLQRKRH	8	Unmodified	_AQLQRKRH_					0	0	0		nc|ENSG00000076864|P47736-3|RAP1GAP	nc|ENSG00000076864|P47736-3|RAP1GAP	nc|ENSG00000076864|P47736-3|RAP1GAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	518.809326171875	2	518.809774	1035.60499	2.7738	0.0014391	-1.6324	-0.00084691	1.1414	0.00059215	518.8088155699829	99.047	1.3978	98.992	98.555	99.953	-0.054817					74	32	3	0	0	0	0.884	1	10715	10715		33.516	0	1	909010			2002	14781	1373	1375	2390	2390					0.08861611616998744
AQLQRKRH	8	Unmodified	_AQLQRKRH_					0	0	0		nc|ENSG00000076864|P47736-3|RAP1GAP	nc|ENSG00000076864|P47736-3|RAP1GAP	nc|ENSG00000076864|P47736-3|RAP1GAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	518.8108520507812	2	518.809774	1035.60499	0.81759	0.00042417	0.35417	0.00018374	1.1718	0.00060792	518.8098125693833	100.34	1.3535	100.5	99.984	101.34	0.15073					78	31	4	0	0	0	0.93529	1	10485	10485		52.299	4.3836	1	1621700			2003	14781	1373	1375	2391	2391					0.08861611616998744
AQMNEVPDSNV	11	Unmodified	_AQMNEVPDSNV_					0	0	0			REV__ENST00000518242.5_1_8:40554805-40644221:-|nuORF	REV__ENST00000518242.5_1_8:40554805-40644221:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	601.2938842773438	2	602.269152	1202.52375	-0.12739	-7.6721E-05	1.1065	0.00066643	0.97914	0.00058971	602.2697232546561	78.617	0.50626	79.181	78.868	79.374	0.56332					23	11	3	0	0	0	0.17339	1	8977	8977		46.457	11.305	1	120730	+		2004	28060	1374	1376	2392	2392					-0.06940921718592108
AQNAKVIEK	9	Unmodified	_AQNAKVIEK_					0	0	0		ENST00000469448.1_1_X:118673692-118676584:-|nuORF;nc|ENSG00000018610|Q9H5V9-2|STEEP1;nc|ENSG00000018610|Q9H5V9-3|STEEP1;ENSG00000018610|ENST00000644802|STEEP1	ENST00000469448.1_1_X:118673692-118676584:-|nuORF	ENST00000469448.1_1_X:118673692-118676584:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.79388427734375	2	500.792924	999.571294	0.35761	0.00017909	-0.096537	-4.8345E-05	0.26107	0.00013074	500.79263517323824	18.801	0.47218	18.172	18.018	18.49	-0.62961					21	10	4	0	0	0	0.58063	1	435	435		47.96	4.3087	1	262270			2005	833	1375	1377	2393	2393					0.07149145334562945
AQNPYQFNFT	10	Unmodified	_AQNPYQFNFT_					0	0	0			REV__ENSG00000116711|ENST00000367466|PLA2G4A	REV__ENSG00000116711|ENST00000367466|PLA2G4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.2822875976562	2	615.28292	1228.55129	-0.33218	-0.00020438	1.1811	0.00072672	0.84893	0.00052233	615.2836152967006	56.482	0.98592	56.47	56.226	57.212	-0.012203					72	40	2	0	0	0	0.77314	1	5121	5121		40.778	2.9666	1	2193600	+		2006	18217	1376	1378	2394	2394					-0.053846503960585324
AQPCRRWA	8	Unmodified	_AQPCRRWA_					0	0	0			REV__ENST00000464728.5_1_16:841010-841472:+|nuORF	REV__ENST00000464728.5_1_16:841010-841472:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.25286865234375	2	494.250703	986.486853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.876	1	38.965	38.465	39.465	0.089558								0	0	0	0.30316	1	2338	2338		42.474	13.304	1		+		2007	27098	1377	1379	2395	2395					-0.006930839631877461
AQPHPMQHRP	10	Unmodified	_AQPHPMQHRP_					0	0	0			REV__ENST00000314891.10_1_15:34651206-34652316:-|nuORF	REV__ENST00000314891.10_1_15:34651206-34652316:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.796630859375	2	599.798549	1197.58254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.907	1	73.992	73.492	74.492	0.085907								0	0	0	0.45132	1	6788	6788		14.865	0	1		+		2008	24939	1378	1380	2396	2396					-0.00834355842948753
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7688903808594	2	470.769783	939.525013	-1.6346	-0.00076952	0.1281	6.0304E-05	-1.5065	-0.00070922	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.76764	1	4103	4103		34.173	0	1	1359900	+		2009	23139	1379	1381	2397	2397					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7691650390625	2	470.769783	939.525013	-0.63239	-0.00029771	-1.0756	-0.00050635	-1.708	-0.00080406	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.76764	1	4804	4804		34.173	1.3601	1	1468500	+		2010	23139	1379	1381	2398	2398					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.76934814453125	2	470.769783	939.525013	-1.1264	-0.00053028	-0.32286	-0.00015199	-1.4493	-0.00068228	470.76946359217703	55.205	1.5206	55.232	54.59	56.111	0.027142					94	39	3	0	0	0	0.51307	1	4904	4904		51.335	3.6781	1	1443000	+		2011	23139	1379	1381	2399	2399					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7688293457031	2	470.769783	939.525013	-1.0178	-0.00047915	-1.0022	-0.0004718	-2.02	-0.00095095	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.51307	1	4329	4329		51.335	1.3109	1	1648400	+		2012	23139	1379	1381	2400	2400					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7693176269531	2	470.769783	939.525013	-0.5306	-0.00024979	-0.82903	-0.00039028	-1.3596	-0.00064007	470.76924692266675	54.862	1.6397	54.812	54.113	55.753	-0.049274					122	51	3	0	0	0	0.47272	1	4577	4577		53.351	5.6941	1	2604200	+		2013	23139	1379	1381	2401	2401					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7690124511719	2	470.769783	939.525013	0.25998	0.00012239	-1.8077	-0.000851	-1.5477	-0.00072861	470.7687399956873	50.307	1.239	50.754	50.307	51.546	0.4476					93	29	5	0	0	0	0.35373	2	4949	4949;4973		60.972	9.7792	1	9098100	+		2014	23139	1379	1381	2402;2403	2402					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76873779296875	2	470.769783	939.525013	-0.0079822	-3.7578E-06	-1.8362	-0.00086443	-1.8442	-0.00086819	470.7688392361173	51.36	0.75376	51.795	51.534	52.288	0.43505					46	17	4	0	0	0	0.51307	1	5072	5072		51.335	1.7994	1	3116800	+		2015	23139	1379	1381	2404	2404					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76837158203125	2	470.769783	939.525013	-0.26642	-0.00012542	-1.5501	-0.00072973	-1.8165	-0.00085516	470.76897416042203	52.548	1.7695	52.972	52.234	54.003	0.42348					108	42	4	0	0	0	0.62081	1	5202	5202		45.952	1.5748	1	18288000	+		2016	23139	1379	1381	2405	2405					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7689514160156	2	470.769783	939.525013	-0.23699	-0.00011157	-1.3396	-0.00063064	-1.5766	-0.00074221	470.7690852138792	80.179	2.0778	80.595	78.892	80.97	0.41621					101	48	4	0	0	0	0.51307	3	9201	9138;9201;9213		51.335	5.3632	1	1333300	+		2017	23139	1379	1381	2406;2407;2408	2407					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7691345214844	2	470.769783	939.525013	-0.38204	-0.00017986	-1.0263	-0.00048316	-1.4084	-0.00066301	470.769153299195	81.635	1.0784	82.062	81.671	82.749	0.42646					51	26	2	0	0	0	0.67345	1	9436	9436		42.396	1.618	1	1307200	+		2018	23139	1379	1381	2409	2409					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7693176269531	2	470.769783	939.525013	0.24256	0.00011419	-1.7466	-0.00082224	-1.504	-0.00070805	470.7687464868604	50.117	1.1073	50.962	50.641	51.748	0.84501					94	26	5	0	0	0	0.67345	2	4963	4963;4975		42.396	1.618	1	10800000	+		2019	23139	1379	1381	2410;2411	2410					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7698059082031	2	470.769783	939.525013	-0.45506	-0.00021423	-1.2089	-0.00056911	-1.664	-0.00078334	470.7691067247387	52.317	1.9749	52.984	52.189	54.164	0.6673					112	47	4	0	0	0	0.51307	1	5203	5203		51.335	1.8939	1	18701000	+		2020	23139	1379	1381	2412	2412					0.052831252231385406
AQPKRGANV	9	Unmodified	_AQPKRGANV_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7694396972656	2	470.769783	939.525013	-0.58113	-0.00027358	-0.70229	-0.00033062	-1.2834	-0.00060419	470.76930204103803	81.63	1.1182	82.13	81.661	82.779	0.49967					51	27	2	0	0	0	0.67345	1	9433	9433		42.396	1.618	1	1330700	+		2021	23139	1379	1381	2413	2413					0.052831252231385406
AQPKVGGRAG	10	Unmodified	_AQPKVGGRAG_					0	0	0		chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76898193359375	2	470.769783	939.525013	-1.6346	-0.00076952	0.1281	6.0304E-05	-1.5065	-0.00070922	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.4892	1	4085	4085		56.721	5.3856	1	1359900			2022	216	1380	1382	2414	2414					0.05283125223149909
AQPKVGGRAG	10	Unmodified	_AQPKVGGRAG_					0	0	0		chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7688293457031	2	470.769783	939.525013	-0.93673	-0.00044098	-0.76345	-0.00035941	-1.7002	-0.00080039	470.7692759714824	53.261	1.827	53.278	52.753	54.58	0.017487					126	54	3	0	0	0	0.77314	1	4732	4732		40.778	3.6191	1	1396300			2023	216	1380	1382	2415	2415					0.05283125223149909
AQPKVGGRAG	10	Unmodified	_AQPKVGGRAG_					0	0	0		chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7690124511719	2	470.769783	939.525013	0.34379	0.00016185	-2.4863	-0.0011705	-2.1425	-0.0010086	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.67571	1	4336	4336		45.972	5.1941	1	1863100			2024	216	1380	1382	2416	2416					0.05283125223149909
AQPKVGGRAG	10	Unmodified	_AQPKVGGRAG_					0	0	0		chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7713317871094	2	470.769783	939.525013	-0.26642	-0.00012542	-1.5501	-0.00072973	-1.8165	-0.00085516	470.76897416042203	52.548	1.7695	52.972	52.234	54.003	0.42348					108	42	4	0	0	0	0.67571	1	5191	5191		45.972	3.108	1	18288000			2025	216	1380	1382	2417	2417					0.05283125223149909
AQPKVGGRAG	10	Unmodified	_AQPKVGGRAG_					0	0	0		chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	chr17:18099093-18100363|19|10.21|0.33|4.96|+|2|DRG2,DRG2|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7697448730469	2	470.769783	939.525013	0.24256	0.00011419	-1.7466	-0.00082224	-1.504	-0.00070805	470.7687464868604	50.117	1.1073	50.962	50.641	51.748	0.84501					94	26	5	0	0	0	0.4892	1	5035	5035		56.721	1.2168	1	10800000			2026	216	1380	1382	2418	2418					0.05283125223149909
AQPQPGLHAPA	11	Unmodified	_AQPQPGLHAPA_					0	0	0		nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;ENSG00000050820|ENST00000162330|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-2|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	nc|ENSG00000050820|P56945-6|BCAR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.7896728515625	2	543.788173	1085.56179	0.44304	0.00024092	-0.65602	-0.00035673	-0.21297	-0.00011581	543.7876407845769	33.288	0.85064	33.234	32.936	33.787	-0.054337					45	20	3	0	0	0	0.72918	1	1989	1989		26.693	0	1	354110			2027	14751;14752	1381	1383	2419	2419					0.02243377049035189
AQPRLRVRGRG	11	Unmodified	_AQPRLRVRGRG_					0	0	0			REV__ENST00000391854.6_1_1:235812975-235813251:-|nuORF	REV__ENST00000391854.6_1_1:235812975-235813251:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.8832397460938	2	633.386711	1264.75887	-0.76688	-0.00048573	-1.356	-0.0008589	-2.1229	-0.0013446	633.3857297307702	51.44	1.7579	51.44	50.814	52.572	0					77	46	2	0	0	0	0.75121	1	4187	4187		12.812	0	1	76099	+		2028	26006	1382	1384	2420	2420					0.13708021382490188
AQQAKGSSVHV	11	Unmodified	_AQQAKGSSVHV_					0	0	0		ENSG00000104774|ENST00000456935|MAN2B1	ENSG00000104774|ENST00000456935|MAN2B1	ENSG00000104774|ENST00000456935|MAN2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	556.2957763671875	2	556.296362	1110.57817	-0.7551	-0.00042006	3.9695	0.0022082	3.2144	0.0017882	556.29824001144	68.93	0.60598	68.996	68.648	69.254	0.065506					41	26	2	0	0	0	0.70737	1	6200	6200		30.318	2.4355	1	90041			2029	2147	1383	1385	2421	2421					0.027304582151373324
AQQIRLHHFNS	11	Unmodified	_AQQIRLHHFNS_					0	0	0		ENSG00000164976|ENST00000297625|MYORG	ENSG00000164976|ENST00000297625|MYORG	ENSG00000164976|ENST00000297625|MYORG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.9047546386719	3	450.905698	1349.69527	-0.093361	-4.2097E-05	-0.68209	-0.00030756	-0.77545	-0.00034966	450.905309306263	19.736	0.74767	19.266	18.928	19.676	-0.46967					40	15	4	0	0	0	0.60687	1	568	568		43.651	8.4726	1	96158			2030	6033	1384	1386	2422	2422					0.03440616154739473
AQQKAPTRK	9	Unmodified	_AQQKAPTRK_					0	0	0		ENSG00000198046|ENST00000504904|ZNF667	ENSG00000198046|ENST00000504904|ZNF667	ENSG00000198046|ENST00000504904|ZNF667	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.3060913085938	2	514.30399	1026.59343	1.0205	0.00052485	2.5049	0.0012883	3.5254	0.0018131	514.3051031223731	22.342	0.32138	21.923	21.741	22.062	-0.41879					9	6	2	0	0	0	0.78536	1	896	896		29.15	0.89528	1	29029			2031	8229	1385	1387	2423	2423					0.0811936980298924
AQQKAPTRK	9	Unmodified	_AQQKAPTRK_					0	0	0		ENSG00000198046|ENST00000504904|ZNF667	ENSG00000198046|ENST00000504904|ZNF667	ENSG00000198046|ENST00000504904|ZNF667	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	514.30399	1026.59343	0.77628	0.00039924	2.3867	0.0012275	3.1629	0.0016267	514.3063534778156	22.115	0.057608	22.106	22.069	22.127	-0.0088234	0.091544	-4.6124E-05	NaN	29.15	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18565			2032	8229	1385	1387							0.0811936980298924
AQQPCPNPG	9	Carbamidomethyl (C)	_AQQPC(Carbamidomethyl (C))PNPG_	AQQPC(1)PNPG		AQQPC(63)PNPG		0	1	0			REV__nc|ENSG00000111087|P08151-3|GLI1	REV__nc|ENSG00000111087|P08151-3|GLI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.71832275390625	2	484.716359	967.418164	0.76608	0.00037133	3.3413	0.0016196	4.1074	0.0019909	484.71784448733064	98.881	4.1852	99.038	95.672	99.857	0.15659					143	97	2	0	0	0	0.31972	1	10253	10253		63.306	24.053	1	472970	+		2033	17849	1386	1388	2424	2424	233				-0.06684793053545945
AQQPCPNPG	9	Carbamidomethyl (C)	_AQQPC(Carbamidomethyl (C))PNPG_	AQQPC(1)PNPG		AQQPC(46)PNPG		0	1	0			REV__nc|ENSG00000111087|P08151-3|GLI1	REV__nc|ENSG00000111087|P08151-3|GLI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.718017578125	2	484.716359	967.418164	1.6171	0.00078385	2.2868	0.0011084	3.9039	0.0018923	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.62081	2	11617	11617;11844		45.952	13.14	1	7541600	+		2034	17849	1386	1388	2425;2426	2425	233				-0.06684793053545945
AQQPCPNPG	9	Carbamidomethyl (C)	_AQQPC(Carbamidomethyl (C))PNPG_	AQQPC(1)PNPG		AQQPC(46)PNPG		0	1	0			REV__nc|ENSG00000111087|P08151-3|GLI1	REV__nc|ENSG00000111087|P08151-3|GLI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7187194824219	2	484.716359	967.418164	1.7202	0.00083382	1.1811	0.00057251	2.9014	0.0014063	484.71724999015095	100.07	1.5114	100.41	100.06	101.57	0.33295					128	39	5	0	0	0	0.62081	1	12060	12060		45.952	10.334	1	10028000	+		2035	17849	1386	1388	2427	2427	233				-0.06684793053545945
AQQPCPNPG	9	Carbamidomethyl (C)	_AQQPC(Carbamidomethyl (C))PNPG_	AQQPC(1)PNPG		AQQPC(63)PNPG		0	1	0			REV__nc|ENSG00000111087|P08151-3|GLI1	REV__nc|ENSG00000111087|P08151-3|GLI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.718017578125	2	484.716359	967.418164	1.0671	0.00051723	2.8185	0.0013662	3.8855	0.0018834	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.31972	3	11901	11692;11704;11901		63.306	22.528	1	7522200	+		2036	17849	1386	1388	2428;2429;2430	2430	233				-0.06684793053545945
AQQRALPQ	8	Unmodified	_AQQRALPQ_					0	0	0		ENSG00000148297|ENST00000343730|MED22;nc|ENSG00000148297|Q15528-2|MED22;ENST00000482295.1_1_9:136213358-136213517:-|nuORF	ENSG00000148297|ENST00000343730|MED22	ENSG00000148297|ENST00000343730|MED22	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7915954589844	2	456.256508	910.498464	-1.238	-0.00056485	-0.94651	-0.00043185	-2.1845	-0.00099671	456.2557626099676	50.027	0.20413	50.056	49.948	50.152	0.029633					6	4	2	0	0	0	0.4196	1	3903	3903		25.45	10.786	1	16925			2037	4944	1387	1389	2431	2431					0.039634363317986754
AQQRRPYRR	9	Unmodified	_AQQRRPYRR_					0	0	0		ENSG00000065978|ENST00000321358|YBX1	ENSG00000065978|ENST00000321358|YBX1	ENSG00000065978|ENST00000321358|YBX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	410.8995666503906	3	410.9024	1229.68537	-0.3824	-0.00015713	-4.4709	-0.0018371	-4.8533	-0.0019942	411.2349693387629	22.797	0.73568	22.738	22.419	23.154	-0.05867					43	24	2	0	0	0	0.7932	1	757	757		22.58	0.018069	1	44235			2038	1147	1388	1390	2432	2432					0.0797147294001661
AQQSGFPYPP	10	Unmodified	_AQQSGFPYPP_					0	0	0			REV__ENSG00000198646|ENST00000359003|NCOA6	REV__ENSG00000198646|ENST00000359003|NCOA6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.2593383789062	2	546.261456	1090.50836	-1.5113	-0.00082559	-4.4802	-0.0024473	-5.9915	-0.0032729	546.2596201303288	59.665	1.0379	60.055	59.609	60.646	0.39077					64	26	3	0	0	0	0.51302	1	6331	6331		54.776	1.8396	1	2812900	+		2039	23350	1389	1391	2433	2433					-0.03327420453479135
AQRCQHYKFRY	11	Unmodified	_AQRCQHYKFRY_					0	0	0		ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.5833740234375	3	500.582338	1498.72519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.67	1	111.65	111.15	112.15	-0.019882								0	0	0	0.56276	1	11900	11900		13.508	0.55046	1				2040	8983	1390	1392	2434	2434					-0.004227681715747167
AQRFIETVF	9	Unmodified	_AQRFIETVF_					0	0	0			REV__ENSG00000174373|ENST00000680220|RALGAPA1	REV__ENSG00000174373|ENST00000680220|RALGAPA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.8004150390625	2	555.800749	1109.58694	-0.68057	-0.00037826	1.1891	0.00066089	0.5085	0.00028263	555.8013013120557	48.198	0.42183	48.189	48.005	48.427	-0.0093269					15	9	2	0	0	0	0.64922	1	3971	3971		44.117	1.7207	1	141670	+		2041	21989	1391	1393	2435	2435					0.0365343185162601
AQRLHVLARMA	11	Unmodified	_AQRLHVLARMA_					0	0	0		ENSG00000105429|ENST00000251268|MEGF8	ENSG00000105429|ENST00000251268|MEGF8	ENSG00000105429|ENST00000251268|MEGF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3679809570312	2	633.366598	1264.71864	1.4675	0.00092945	2.4291	0.0015385	3.8966	0.002468	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.71803	1	9910	9910		13.454	0	1	5460600			2042	2217	1392	1394	2436	2436					0.096873386677089
AQRLVRKPGG	10	Unmodified	_AQRLVRKPGG_					0	0	0		ENST00000336798.11_2_1:31343892-31344021:-|nuORF	ENST00000336798.11_2_1:31343892-31344021:-|nuORF	ENST00000336798.11_2_1:31343892-31344021:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.3378295898438	2	541.333082	1080.65161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.236	1	25.26	24.76	25.76	0.024021								0	0	0	0.45132	1	904	904		27.882	4.8398	1				2043	10177	1393	1395	2437	2437					0.11451051448261751
AQRSHTLE	8	Unmodified	_AQRSHTLE_					0	0	0		ENSG00000168672|ENST00000304916|LRATD2	ENSG00000168672|ENST00000304916|LRATD2	ENSG00000168672|ENST00000304916|LRATD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.2428283691406	2	471.243598	940.472643	-0.21882	-0.00010312	0.58326	0.00027486	0.36444	0.00017174	471.24368623226155	85.627	3.5823	85.685	84.499	88.081	0.057899					161	82	3	0	0	0	0.89494	1	8625	8625		37.159	4.3467	1	246480			2044	6423	1394	1396	2438	2438					2.5420895326533355E-05
AQRTAAHLLM	10	Oxidation (M)	_AQRTAAHLLM(Oxidation (M))_		AQRTAAHLLM(1)		AQRTAAHLLM(49)	0	0	1			REV__ENST00000539757.1_1_12:9440801-9462940:+|nuORF	REV__ENST00000539757.1_1_12:9440801-9462940:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.1883544921875	2	564.303133	1126.59171	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.011	1	67.011	66.511	67.511	0								0	0	0	0.45132	1	5918	5918		49.442	20.292	1		+		2045	28454	1395	1397	2439	2439		420			0.03347992722729032
AQRWGYTNI	9	Unmodified	_AQRWGYTNI_					0	0	0			REV__nc|ENSG00000143324|Q9UBH6-2|XPR1	REV__nc|ENSG00000143324|Q9UBH6-2|XPR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2586669921875	2	554.780348	1107.54614	-0.71661	-0.00039756	0.34561	0.00019174	-0.371	-0.00020582	554.7803059094236	71.306	0.33122	71.69	71.461	71.793	0.38449					14	7	3	0	0	0	0.20789	1	7920	7920		45.972	0	1	122470	+		2046	19791	1396	1398	2440	2440					-0.003329094680111666
AQSKATVRP	9	Unmodified	_AQSKATVRP_					0	0	0		ENSG00000122735|ENST00000242317|DNAI1;nc|ENSG00000122735|Q9UI46-2|DNAI1	ENSG00000122735|ENST00000242317|DNAI1	ENSG00000122735|ENST00000242317|DNAI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2775573730469	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.78035	2	7986	7820;7986		30.569	2.6313	1	2142700			2047	3244	1397	1399	2441;2442	2442					0.06031992020314192
AQSKATVRP	9	Unmodified	_AQSKATVRP_					0	0	0		ENSG00000122735|ENST00000242317|DNAI1;nc|ENSG00000122735|Q9UI46-2|DNAI1	ENSG00000122735|ENST00000242317|DNAI1	ENSG00000122735|ENST00000242317|DNAI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27734375	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.75725	1	8282	8282		36.447	1.2947	1	6593200			2048	3244	1397	1399	2443	2443					0.06031992020314192
AQSLCKKSA	9	Unmodified	_AQSLCKKSA_					0	0	0			REV__ENST00000473270.1_1_9:33016115-33025020:-|nuORF	REV__ENST00000473270.1_1_9:33016115-33025020:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2552185058594	2	468.252577	934.490601	0.516	0.00024162	4.3034	0.0020151	4.8194	0.0022567	468.25439307684206	81.814	3.5851	81.751	80.618	84.204	-0.062943					157	83	2	0	0	0	0.71772	1	8447	8447		39.253	1.4413	1	180670	+		2049	27280	1398	1400	2444	2444					0.020735410200245497
AQSRKRGLRH	10	Unmodified	_AQSRKRGLRH_					0	0	0			REV__ENSG00000135392|ENST00000678005|DNAJC14	REV__ENSG00000135392|ENST00000678005|DNAJC14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.574462890625	3	403.574283	1207.70102	2.7142	0.0010954	-1.4746	-0.00059509	1.2396	0.00050028	403.5735867782374	82.542	1.5525	82.601	81.516	83.068	0.059158					87	35	3	0	0	0	0.86338	1	8290	8290		31.634	2.0835	1	371500	+		2050	19215	1399	1401	2445	2445					0.10547759457085704
AQSRKRGLRH	10	Unmodified	_AQSRKRGLRH_					0	0	0			REV__ENSG00000135392|ENST00000678005|DNAJC14	REV__ENSG00000135392|ENST00000678005|DNAJC14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.858642578125	2	604.857786	1207.70102	0.73307	0.0004434	0.32301	0.00019537	1.0561	0.00063878	604.857969611277	81.761	1.4227	81.906	80.909	82.331	0.14551					61	32	3	0	0	0	0.86802	1	7855	7855		15.642	0	1	397570	+		2051	19215	1399	1401	2446	2446					0.10547759457085704
AQSRKRGLRHR	11	Unmodified	_AQSRKRGLRHR_					0	0	0			REV__ENSG00000135392|ENST00000678005|DNAJC14	REV__ENSG00000135392|ENST00000678005|DNAJC14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6079406738281	3	455.607987	1363.80213	-1.1702	-0.00053316	2.0234	0.00092186	0.85314	0.0003887	455.6088473881977	71.256	2.1835	71.333	70.628	72.811	0.076225					206	91	3	0	0	0	0.70278	1	6592	6592		31.068	6.0004	1	589510	+		2052	19215	1400	1402	2447	2447					0.13478211159781495
AQSRKRGLRHR	11	Unmodified	_AQSRKRGLRHR_					0	0	0			REV__ENSG00000135392|ENST00000678005|DNAJC14	REV__ENSG00000135392|ENST00000678005|DNAJC14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.60870361328125	3	455.607987	1363.80213	-0.20528	-9.3526E-05	1.115	0.00050802	0.90976	0.0004145	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.78683	1	7373	7373		14.086	0.57807	1	1835000	+		2053	19215	1400	1402	2448	2448					0.13478211159781495
AQTIPQMLA	9	Unmodified	_AQTIPQMLA_					0	0	0		nc|ENSG00000065150|O00410-2|IPO5;ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-3|IPO5;ENST00000470493.1_1_13:98645409-98652946:+|nuORF	nc|ENSG00000065150|O00410-2|IPO5	nc|ENSG00000065150|O00410-2|IPO5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.7613830566406	2	486.762778	971.511002	0.0078128	3.803E-06	-3.4757	-0.0016918	-3.4678	-0.001688	486.76094746193235	37.226	3.175	37.539	36.88	40.055	0.31312					217	77	4	0	0	0	0.71772	1	3197	3197		39.253	5.7372	1	1950900			2054	1121	1401	1403	2449	2449					0.02410711679817723
AQVFWSGR	8	Unmodified	_AQVFWSGR_					0	0	0			REV__nc|ENSG00000165806|P55210-4|CASP7	REV__nc|ENSG00000165806|P55210-4|CASP7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.24871826171875	2	475.745776	949.477	0.3059	0.00014553	-0.28356	-0.0001349	0.022342	1.0629E-05	475.74437079870773	29.504	0.44273	29.535	29.296	29.739	0.030947					20	13	2	0	0	0	0.89962	1	1453	1453		38.806	1.7777	1	21493	+		2055	21220	1402	1404	2450	2450					0.00024051303091709997
AQVFWSGR	8	Unmodified	_AQVFWSGR_					0	0	0			REV__nc|ENSG00000165806|P55210-4|CASP7	REV__nc|ENSG00000165806|P55210-4|CASP7	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	475.745776	949.477	0.3059	0.00014553	-0.28356	-0.0001349	0.022342	1.0629E-05	475.74437079870773	29.504	0.44273	29.535	29.296	29.739	0.030947	0	0	NaN	38.806	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21493	+		2056	21220	1402	1404							0.00024051303091709997
AQVLEHKA	8	Unmodified	_AQVLEHKA_					0	0	0		nc|ENSG00000118729|O14958-2|CASQ2;ENSG00000118729|ENST00000261448|CASQ2	nc|ENSG00000118729|O14958-2|CASQ2	nc|ENSG00000118729|O14958-2|CASQ2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.3069152832031	2	448.253434	894.492316	0.08141	3.6492E-05	0.50997	0.00022859	0.59138	0.00026509	448.25350021841854	21.08	0.58133	20.62	20.395	20.976	-0.4591					24	13	3	0	0	0	0.4196	1	728	728		30.504	5.0535	1	47846			2057	3043	1403	1405	2451	2451					0.04084918100284085
ARAAPAGRTGA	11	Unmodified	_ARAAPAGRTGA_					0	0	0		ENST00000482812.1_1_7:151722842-151791409:+|nuORF;ENST00000430044.6_2_7:151722842-151791279:+|nuORF	ENST00000482812.1_1_7:151722842-151791409:+|nuORF	ENST00000482812.1_1_7:151722842-151791409:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.803466796875	2	499.778139	997.541725	0.36581	0.00018283	3.8668	0.0019325	4.2326	0.0021154	500.2818237165551	52.301	0.1199	52.36	52.327	52.447	0.059719					5	4	2	0	0	0	0.17347	1	4216	4216		16.717	6.5326	1	23881			2058	11624	1404	1406	2452	2452					0.042856261090946646
ARAARVARVAI	11	Unmodified	_ARAARVARVAI_					0	0	0			REV__ENST00000320892.10_1_2:7057533-7081179:+|nuORF	REV__ENST00000320892.10_1_2:7057533-7081179:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3663330078125	2	577.367456	1152.72036	0.64818	0.00037424	-2.4151	-0.0013944	-1.7669	-0.0010202	577.3659582171192	102.04	3.0704	102.23	101.84	104.91	0.19484					206	76	5	0	0	0	0.75921	2	10741	10741;10753		19.997	0.89325	1	17266000	+		2059	25004	1405	1407	2453;2454	2453					0.1501071574798516
ARAARVARVAI	11	Unmodified	_ARAARVARVAI_					0	0	0			REV__ENST00000320892.10_1_2:7057533-7081179:+|nuORF	REV__ENST00000320892.10_1_2:7057533-7081179:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3662719726562	2	577.367456	1152.72036	-1.363	-0.00078696	-0.38938	-0.00022481	-1.7524	-0.0010118	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.72918	1	10681	10681		26.693	0	1	14386000	+		2060	25004	1405	1407	2455	2455					0.1501071574798516
ARAASLRRLTP	11	Unmodified	_ARAASLRRLTP_					0	0	0		ENST00000382882.7_2_4:2011010-2011436:-|nuORF	ENST00000382882.7_2_4:2011010-2011436:-|nuORF	ENST00000382882.7_2_4:2011010-2011436:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	606.3695678710938	2	606.370195	1210.72584	0.84903	0.00051483	-1.9782	-0.0011995	-1.1292	-0.00068469	606.3688643769136	94.076	3.4223	94.237	93.324	96.746	0.16118					202	81	3	0	0	0	0.732	1	9532	9532		26.063	0.48933	1	934800			2061	10978	1406	1408	2456	2456					0.12890394539795125
ARAASLRRLTP	11	Unmodified	_ARAASLRRLTP_					0	0	0		ENST00000382882.7_2_4:2011010-2011436:-|nuORF	ENST00000382882.7_2_4:2011010-2011436:-|nuORF	ENST00000382882.7_2_4:2011010-2011436:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.368896484375	2	606.370195	1210.72584	-1.2685	-0.00076921	0.17559	0.00010647	-1.0929	-0.00066273	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.7434	1	9575	9575		23.523	2.6855	1	823240			2062	10978	1406	1408	2457	2457					0.12890394539795125
ARAATRAR	8	Unmodified	_ARAATRAR_					0	0	0		ENST00000391812.5_1_19:51305829-51307876:-|nuORF;ENST00000345523.8_1_19:51305499-51307975:-|nuORF	ENST00000391812.5_1_19:51305829-51307876:-|nuORF	ENST00000391812.5_1_19:51305829-51307876:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.7747497558594	2	436.762292	871.510031	-1.0629	-0.00046422	-3.0726	-0.001342	-4.1354	-0.0018062	436.75994691507253	90.522	0.23169	90.993	90.816	91.048	0.47068					7	5	2	0	0	0	0.4196	1	10744	10744		12.207	0.69583	1	50899			2063	10305	1407	1409	2458	2458					0.06913678145792801
ARAEARMDE	9	Unmodified	_ARAEARMDE_					0	0	0			REV__ENSG00000197241|ENST00000400906|SLC2A7	REV__ENSG00000197241|ENST00000400906|SLC2A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.7447509765625	2	524.745647	1047.47674	0.14982	7.8618E-05	-3.6583	-0.0019197	-3.5085	-0.0018411	524.7437165379287	25.809	0.79892	25.768	25.295	26.094	-0.041168					35	21	2	0	0	0	0.71772	1	1113	1113		39.253	0.49923	1	42596	+		2064	23211	1408	1410	2459	2459					-0.045097364790763095
ARAEGNSF	8	Unmodified	_ARAEGNSF_					0	0	0		ENST00000522941.5_2_8:130916790-130951872:-|nuORF	ENST00000522941.5_2_8:130916790-130951872:-|nuORF	ENST00000522941.5_2_8:130916790-130951872:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.202392578125	2	426.203941	850.39333	-0.12894	-5.4956E-05	-4.1821	-0.0017824	-4.311	-0.0018374	426.2020164864717	81.871	1.0375	82.298	81.962	83	0.42646					55	25	3	0	0	0	0.92394	1	9442	9442		47.657	0.8909	1	1144500			2065	13196	1409	1411	2460	2460					-0.037851048646189156
ARAFHHVGSL	10	Unmodified	_ARAFHHVGSL_					0	0	0			REV__nc|ENSG00000171603|O94985-2|CLSTN1	REV__nc|ENSG00000171603|O94985-2|CLSTN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3734130859375	2	547.796332	1093.57811	-0.51915	-0.00028439	-0.65033	-0.00035625	-1.1695	-0.00064064	547.7957749077788	35.605	0.86988	35.614	35.295	36.165	0.0092773					39	18	3	0	0	0	0.37624	1	2287	2287		32.812	0	1	196450	+		2066	21754	1410	1412	2461	2461					0.03506503005792183
ARAFYADLLK	10	Unmodified	_ARAFYADLLK_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.3284301757812	2	584.329673	1166.64479	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.88	1	113.88	113.38	114.38	0.0011978								0	0	0	0.45132	1	13744	13744		18.262	1.7889	1		+		2067	19832	1411	1413	2462	2462					0.06813693777007757
ARAIFLLLTLV	11	Unmodified	_ARAIFLLLTLV_					0	0	0			REV__ENSG00000166111|ENST00000610966|SVOP	REV__ENSG00000166111|ENST00000610966|SVOP	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	615.404052734375	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.587	1	51.647	51.147	52.147	0.059719								0	0	0	0.56276	1	4115	4115		36.447	13.404	1		+		2068	21251	1412	1414	2463	2463					0.18548576293073893
ARAIKRGT	8	Unmodified	_ARAIKRGT_					0	0	0			REV__ENSG00000237441|ENST00000497454|RGL2	REV__ENSG00000237441|ENST00000497454|RGL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7750244140625	2	436.774868	871.535184	-1.8179	-0.00079401	1.75	0.00076436	-0.067879	-2.9648E-05	436.77554812926275	90.686	2.546	90.866	90.262	92.808	0.18029					181	60	4	0	0	0	0.85277	1	9199	9199		25.45	0	1	8965000	+		2069	23797	1413	1415	2464	2464					0.09427732948381617
ARAIQRKPNP	10	Unmodified	_ARAIQRKPNP_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8428955078125	2	575.843813	1149.67307	-0.99734	-0.00057431	-0.59372	-0.00034189	-1.5911	-0.00091621	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.77314	1	9622	9622		40.778	3.6191	1	5638300			2070	5245	1414	1416	2465	2465					0.10422436476983421
ARAIQRKPNP	10	Unmodified	_ARAIQRKPNP_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8425903320312	2	575.843813	1149.67307	0.80402	0.00046299	-2.4364	-0.001403	-1.6324	-0.00094001	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.64457	1	9220	9220		47.657	15.702	1	6947200			2071	5245	1414	1416	2466	2466					0.10422436476983421
ARAKADGVD	9	Unmodified	_ARAKADGVD_					0	0	0			REV__ENSG00000169184|ENST00000302326|MN1	REV__ENSG00000169184|ENST00000302326|MN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.6338806152344	2	451.738148	901.461744	0.29685	0.0001341	-1.4429	-0.0006518	-1.146	-0.0005177	451.73794294663907	32.209	0.58588	32.203	31.764	32.35	-0.0061455					17	13	2	0	0	0	0.20789	1	1811	1811		27.882	0	1	21557	+		2072	21559	1415	1417	2467	2467					0.007071397152230929
ARAKGKGKG	9	Unmodified	_ARAKGKGKG_					0	0	0			REV__ENSG00000107829|ENST00000331272|FBXW4	REV__ENSG00000107829|ENST00000331272|FBXW4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7691650390625	2	436.774868	871.535184	-0.35354	-0.00015442	-2.6501	-0.0011575	-3.0037	-0.0013119	436.77386062542524	26.841	0.59137	26.803	26.483	27.075	-0.038525					26	14	2	0	0	0	0.7932	1	1267	1267		15.642	1.8665	1	55158	+		2073	17677	1416	1418	2468	2468					0.09427732948370249
ARAKLIWA	8	Unmodified	_ARAKLIWA_					0	0	0			REV__nc|ENSG00000165533|Q8TAM2-6|TTC8	REV__nc|ENSG00000165533|Q8TAM2-6|TTC8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7227783203125	2	464.789987	927.565421	-1.8726	-0.00087039	3.328	0.0015468	1.4553	0.00067641	464.79142205700754	36.889	1.6787	36.889	35.761	37.439	0					76	39	3	0	0	0	0.81724	1	2045	2045		14.664	0	1	196040	+		2074	21194	1417	1419	2469	2469					0.09874091613539804
ARAKSVPTK	9	Unmodified	_ARAKSVPTK_					0	0	0		ENST00000506489.1_1_1:205496975-205497827:+|nuORF;ENST00000550971.5_1_12:96677414-96688846:-|nuORF;ENST00000489617.5_1_1:205496852-205498898:+|nuORF;ENST00000505932.5_1_1:205492708-205498898:+|nuORF;ENST00000504648.5_1_1:205492597-205500503:+|nuORF;ENSG00000117266|ENST00000429964|CDK18;nc|ENSG00000117266|Q07002-3|CDK18;nc|ENSG00000059758|Q00537-2|CDK17;ENSG00000059758|ENST00000261211|CDK17	ENST00000506489.1_1_1:205496975-205497827:+|nuORF	ENST00000506489.1_1_1:205496975-205497827:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2956848144531	2	479.295633	956.576714	1.3942	0.00066824	-1.1885	-0.00056966	0.20568	9.858E-05	479.29486413212527	21.566	0.66916	21.123	20.825	21.494	-0.44324					27	15	2	0	0	0	0.51592	1	796	796		51.193	3.5354	1	189080			2075	1056	1418	1420	2470	2470					0.0966886891702643
ARAKSVPTK	9	Unmodified	_ARAKSVPTK_					0	0	0		ENST00000506489.1_1_1:205496975-205497827:+|nuORF;ENST00000550971.5_1_12:96677414-96688846:-|nuORF;ENST00000489617.5_1_1:205496852-205498898:+|nuORF;ENST00000505932.5_1_1:205492708-205498898:+|nuORF;ENST00000504648.5_1_1:205492597-205500503:+|nuORF;ENSG00000117266|ENST00000429964|CDK18;nc|ENSG00000117266|Q07002-3|CDK18;nc|ENSG00000059758|Q00537-2|CDK17;ENSG00000059758|ENST00000261211|CDK17	ENST00000506489.1_1_1:205496975-205497827:+|nuORF	ENST00000506489.1_1_1:205496975-205497827:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	479.295633	956.576714	-0.83134	-0.00039846	1.0973	0.00052595	0.266	0.00012749	479.2960295639838	21.833	0.53513	21.205	20.887	21.422	-0.62835	0.040933	0.00085095	NaN	51.193	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	163700			2076	1056	1418	1420							0.0966886891702643
ARAMELLQ	8	Unmodified	_ARAMELLQ_					0	0	0		CON__P01030;CON__ENSEMBL:ENSBTAP00000007350	CON__P01030	CON__P01030	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2543029785156	2	466.25512	930.495686	-1.4812	-0.00069062	-0.75102	-0.00035017	-2.2322	-0.0010408	466.2546647596287	63.114	1.6104	63.114	62.32	63.93	0					124	75	2	0	0	0	0.87064	1	5582	5582		29.15	2.3535	1	225480		+	2077	562	1419	1421	2471	2471					0.027658448826400672
ARANKLVQ	8	Unmodified	_ARANKLVQ_					0	0	0			REV__nc|ENSG00000182199|P34897-3|SHMT2	REV__nc|ENSG00000182199|P34897-3|SHMT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7541809082031	2	450.274701	898.534849	-1.2698	-0.00057176	1.7705	0.00079719	0.50065	0.00022543	450.27518849943823	83.182	0.60574	83.347	83.018	83.624	0.1651					28	13	3	0	0	0	0.4196	1	7995	7995		11.511	0	1	176720	+		2078	22508	1420	1422	2472	2472					0.08152313228515595
ARANTLAPGT	10	Unmodified	_ARANTLAPGT_					0	0	0		ENST00000372980.3_1_20:42815125-42815341:-|nuORF	ENST00000372980.3_1_20:42815125-42815341:-|nuORF	ENST00000372980.3_1_20:42815125-42815341:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.26708984375	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.70553	1	8403	8403		44.377	3.599	1	1182200			2079	10723	1421	1423	2473	2473					0.03315401640657001
ARAPLRASA	9	Unmodified	_ARAPLRASA_					0	0	0			REV__ENST00000504771.2_1_5:118691243-118691579:+|nuORF	REV__ENST00000504771.2_1_5:118691243-118691579:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.77252197265625	2	456.772326	911.530098	-1.1318	-0.00051697	1.567	0.00071576	0.43521	0.00019879	456.7727770907754	90.264	1.662	90.264	89.603	91.265	0					93	38	4	0	0	0	0.7932	1	8746	8746		25.574	0.12388	1	669440	+		2080	27866	1422	1424	2474	2474					0.07079429085740685
ARAPPRTG	8	Unmodified	_ARAPPRTG_					0	0	0			REV__ENST00000590064.1_1_19:3754191-3754320:-|nuORF	REV__ENST00000590064.1_1_19:3754191-3754320:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2372131347656	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.8347	1	6888	6888		23.042	1.3402	1	1341700	+		2081	24956	1423	1425	2475	2475					0.04243184505901354
ARAPRAASLRV	11	Unmodified	_ARAPRAASLRV_					0	0	0		ENST00000400087.7_1_21:27102104-27107872:-|nuORF;ENST00000400093.3_1_21:27107512-27107872:-|nuORF	ENST00000400087.7_1_21:27102104-27107872:-|nuORF	ENST00000400087.7_1_21:27102104-27107872:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	584.3570556640625	2	584.357088	1166.69962	0.73696	0.00043065	-2.5462	-0.0014879	-1.8092	-0.0010572	584.3556286390271	92.429	3.0487	92.654	91.107	94.155	0.22547					201	72	4	0	0	0	0.7144	1	9337	9337		29.17	8.2231	1	730880			2082	11220	1424	1426	2476	2476					0.12294125368271125
ARARFPPRG	9	Unmodified	_ARARFPPRG_					0	0	0		ENST00000356244.7_2_22:41670730-41682075:-|nuORF	ENST00000356244.7_2_22:41670730-41682075:-|nuORF	ENST00000356244.7_2_22:41670730-41682075:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.29736328125	2	514.299042	1026.58353	-1.5684	-0.00080663	-0.55866	-0.00028732	-2.1271	-0.001094	514.2990007980452	96.402	2.2846	96.604	95.027	97.312	0.20242					111	53	3	0	0	0	0.78536	1	9892	9892		29.15	2.3535	1	524360			2083	10363	1425	1427	2477	2477					0.07130226588265032
ARARPPSA	8	Unmodified	_ARARPPSA_					0	0	0		ENST00000529503.5_1_8:145137494-145138312:+|nuORF	ENST00000529503.5_1_8:145137494-145138312:+|nuORF	ENST00000529503.5_1_8:145137494-145138312:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2377624511719	2	413.238119	824.461684	-1.33	-0.0005496	2.1463	0.00088694	0.81635	0.00033735	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.89494	1	7271	7271		37.159	0	1	895630			2084	13326	1426	1428	2478	2478					0.04243184505889985
ARARPPSA	8	Unmodified	_ARARPPSA_					0	0	0		ENST00000529503.5_1_8:145137494-145138312:+|nuORF	ENST00000529503.5_1_8:145137494-145138312:+|nuORF	ENST00000529503.5_1_8:145137494-145138312:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2379455566406	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.89043	1	7552	7552		35.618	1.4457	1	1747900			2085	13326	1426	1428	2479	2479					0.04243184505889985
ARARPPSA	8	Unmodified	_ARARPPSA_					0	0	0		ENST00000529503.5_1_8:145137494-145138312:+|nuORF	ENST00000529503.5_1_8:145137494-145138312:+|nuORF	ENST00000529503.5_1_8:145137494-145138312:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2377624511719	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.87479	1	7267	7267		30.504	0	1	1341700			2086	13326	1426	1428	2480	2480					0.04243184505889985
ARARPRALPGT	11	Unmodified	_ARARPRALPGT_					0	0	0		ENST00000464873.5_2_3:127872492-127872603:-|nuORF	ENST00000464873.5_2_3:127872492-127872603:-|nuORF	ENST00000464873.5_2_3:127872492-127872603:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.3263549804688	2	583.349263	1164.68397	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.99	1	113.01	112.51	113.51	0.016953								0	0	0	0.56276	1	13680	13680		8.6937	0	1				2087	12100	1427	1429	2481	2481					0.10821838851234133
ARARRRGLNLL	11	Unmodified	_ARARRRGLNLL_					0	0	0			REV__ENST00000488949.1_1_20:56884861-56920492:+|nuORF	REV__ENST00000488949.1_1_20:56884861-56920492:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59765625	3	432.609216	1294.80582	0.73476	0.00031786	-2.0291	-0.00087781	-1.2944	-0.00055995	432.6089483474919	106.13	0.35693	106.23	105.99	106.35	0.099007					14	8	3	0	0	0	0.17729	1	11326	11326		12.957	0	1	304560			2088	27609	1428	1430	2482	2482					0.1702088093366001
ARASAPRP	8	Unmodified	_ARASAPRP_					0	0	0			REV__ENST00000481599.1_1_6:39081481-39082817:-|nuORF	REV__ENST00000481599.1_1_6:39081481-39082817:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2369079589844	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.87479	1	7022	7022		30.504	2.2494	1	1341700	+		2089	17922	1429	1431	2483	2483					0.04243184505889985
ARASIRPLRWK	11	Unmodified	_ARASIRPLRWK_					0	0	0			REV__nc|ENSG00000168397|Q9Y4P1-2|ATG4B	REV__nc|ENSG00000168397|Q9Y4P1-2|ATG4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9429626464844	3	451.945717	1352.81532	-1.2962	-0.0005858	-4.4264	-0.0020005	-5.7226	-0.0025863	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.72892	3	4349	4333;4341;4349		26.75	6.5367	1	734340	+		2090	30014	1430	1432	2484;2485;2486	2486					0.1530264921914295
ARASRCPRAP	10	Unmodified	_ARASRCPRAP_					0	0	0			REV__ENST00000377103.2_1_20:23029966-23030299:-|nuORF	REV__ENST00000377103.2_1_20:23029966-23030299:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.7931518554688	2	542.793266	1083.57198	-0.041719	-2.2645E-05	0.96234	0.00052235	0.92062	0.00049971	542.7933110759859	54.272	0.67086	54.678	54.319	54.99	0.40663					31	15	3	0	0	0	0.51302	1	5522	5522		54.776	0	1	632310	+		2091	25855	1431	1433	2487	2487					0.033536615026150685
ARASRCPRAP	10	Unmodified	_ARASRCPRAP_					0	0	0			REV__ENST00000377103.2_1_20:23029966-23030299:-|nuORF	REV__ENST00000377103.2_1_20:23029966-23030299:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	542.793266	1083.57198	-0.041719	-2.2645E-05	0.96234	0.00052235	0.92062	0.00049971	542.7933110759859	54.272	0.67086	54.678	54.319	54.99	0.40663	0.038631	-0.00038261	NaN	54.776	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	632310	+		2092	25855	1431	1433							0.033536615026150685
ARASRCPRAP	10	Unmodified	_ARASRCPRAP_					0	0	0			REV__ENST00000377103.2_1_20:23029966-23030299:-|nuORF	REV__ENST00000377103.2_1_20:23029966-23030299:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	542.793266	1083.57198	-0.6828	-0.00037062	1.5147	0.00082214	0.83186	0.00045153	542.7938046877849	54.016	0.49883	54.601	54.418	54.917	0.58474	-0.038631	0.00021697	NaN	54.776	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	630740	+		2093	25855	1431	1433							0.033536615026150685
ARATKGRI	8	Unmodified	_ARATKGRI_					0	0	0		ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENSG00000163931|ENST00000462138|TKT;nc|ENSG00000163931|P29401-2|TKT;ENST00000460343.5_1_3:53260493-53260973:-|nuORF	ENST00000461139.5_1_3:53259774-53265639:-|nuORF	ENST00000461139.5_1_3:53259774-53265639:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7748718261719	2	436.774868	871.535184	-1.136	-0.00049617	1.2009	0.00052453	0.064932	2.8361E-05	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.87922	1	9040	9040		31.955	0	1	8774400			2094	5884	1432	1434	2488	2488					0.09427732948381617
ARCQGPGH	8	Unmodified	_ARCQGPGH_					0	0	0		nc|ENSG00000103199|O60304-2|ZNF500;ENSG00000103199|ENST00000219478|ZNF500	nc|ENSG00000103199|O60304-2|ZNF500	nc|ENSG00000103199|O60304-2|ZNF500	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1939697265625	2	413.192854	824.371155	-0.086313	-3.5664E-05	0.8817	0.00036431	0.79539	0.00032865	413.1936016248627	77.941	2.7232	78.504	78.093	80.816	0.56332					177	64	5	0	0	0	0.88915	1	8908	8908		35.201	6.9464	1	6380300			2095	2063	1433	1435	2489	2489					-0.048056078140234604
ARDELREIEL	10	Unmodified	_ARDELREIEL_					0	0	0			REV__ENST00000269347.10_1_17:80654322-80654481:-|nuORF	REV__ENST00000269347.10_1_17:80654322-80654481:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3359375	2	622.335684	1242.65681	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.77	1	110.8	110.3	111.3	0.031738								0	0	0	0.45132	1	12134	12134		9.7057	0	1		+		2096	24524	1434	1436	2490	2490					0.04519265729595645
ARDELREIEL	10	Unmodified	_ARDELREIEL_					0	0	0			REV__ENST00000269347.10_1_17:80654322-80654481:-|nuORF	REV__ENST00000269347.10_1_17:80654322-80654481:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	622.3367309570312	2	622.335684	1242.65681	1.3137	0.00081755	-0.6407	-0.00039873	0.67298	0.00041882	622.3350869567015	110.38	0.61507	110.5	110.27	110.88	0.11658					50	19	3	0	0	0	0.86207	1	11881	11881		19.104	0	1	758400	+		2097	24524	1434	1436	2491	2491					0.04519265729595645
ARDLHCLLVTV	11	Unmodified	_ARDLHCLLVTV_					0	0	0		ENST00000592937.1_1_19:2476862-2477408:+|nuORF	ENST00000592937.1_1_19:2476862-2477408:+|nuORF	ENST00000592937.1_1_19:2476862-2477408:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	620.3585205078125	2	620.34754	1238.68053	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.165	1	72.165	71.665	72.665	0								0	0	0	0.56276	1	6463	6463		27.047	0.98393	1				2098	14298	1435	1437	2492	2492					0.07073407962366218
ARDLQTSCIM	10	Unmodified	_ARDLQTSCIM_					0	0	0			REV__nc|ENSG00000130164|P01130-2|LDLR	REV__nc|ENSG00000130164|P01130-2|LDLR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.274169921875	2	569.273183	1136.53181	-1.155	-0.0006575	4.1415	0.0023576	2.9865	0.0017001	569.2755945956161	58.672	0.65927	58.659	58.318	58.977	-0.013729					50	23	3	0	0	0	0.40664	1	5344	5344		63.534	1.8426	1	186800	+		2099	18852	1436	1438	2493	2493					-0.03099066002823747
ARDLQTSCIM	10	Unmodified	_ARDLQTSCIM_					0	0	0			REV__nc|ENSG00000130164|P01130-2|LDLR	REV__nc|ENSG00000130164|P01130-2|LDLR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.7763671875	2	569.273183	1136.53181	0.087819	4.9993E-05	2.6523	0.0015099	2.7401	0.0015599	569.2748918434346	58.626	0.62676	58.595	58.209	58.836	-0.030888					43	19	3	0	0	0	0.86338	1	5471	5471		31.634	5.5709	1	198820	+		2100	18852	1436	1438	2494	2494					-0.03099066002823747
ARDLQTSCIM	10	Unmodified	_ARDLQTSCIM_					0	0	0			REV__nc|ENSG00000130164|P01130-2|LDLR	REV__nc|ENSG00000130164|P01130-2|LDLR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.2744750976562	2	569.273183	1136.53181	-0.11342	-6.4567E-05	2.7499	0.0015655	2.6365	0.0015009	569.2748468020036	58.534	0.62846	58.568	58.24	58.869	0.033905					49	21	3	0	0	0	0.66675	3	5365	5358;5365;5396		46.457	8.9486	1	202570	+		2101	18852	1436	1438	2495;2496;2497	2496					-0.03099066002823747
ARDLQTSCIM	10	Unmodified	_ARDLQTSCIM_					0	0	0			REV__nc|ENSG00000130164|P01130-2|LDLR	REV__nc|ENSG00000130164|P01130-2|LDLR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.27490234375	2	569.273183	1136.53181	0.45077	0.00025661	2.5113	0.0014296	2.9621	0.0016862	569.274532960243	58.596	0.96936	58.683	58.327	59.296	0.087002					138	45	4	0	0	0	0.12134	2	5003	4980;5003		98.582	23.539	1	2576000	+		2102	18852	1436	1438	2498;2499	2499					-0.03099066002823747
ARDLQTSCIM	10	Unmodified	_ARDLQTSCIM_					0	0	0			REV__nc|ENSG00000130164|P01130-2|LDLR	REV__nc|ENSG00000130164|P01130-2|LDLR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.2747192382812	2	569.273183	1136.53181	0.4898	0.00027883	2.3934	0.0013625	2.8832	0.0016413	569.2744694870318	58.537	1.2979	58.647	58.343	59.641	0.11027					132	48	4	0	0	0	0.24988	1	5013	5013		78.264	12.798	1	2907600	+		2103	18852	1436	1438	2500	2500					-0.03099066002823747
ARDLQTSCIM	10	Unmodified	_ARDLQTSCIM_					0	0	0			REV__nc|ENSG00000130164|P01130-2|LDLR	REV__nc|ENSG00000130164|P01130-2|LDLR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.2747802734375	2	569.273183	1136.53181	-0.34666	-0.00019734	3.3159	0.0018877	2.9693	0.0016903	569.2749940936244	58.625	1.0905	58.617	58.275	59.365	-0.0074425					124	43	4	0	0	0	0.081281	4	4998	4972;4998;5025;5039		104.06	13.296	1	2598100	+		2104	18852	1436	1438	2501;2502;2503;2504	2502					-0.03099066002823747
ARDLQTSCIM	10	Unmodified	_ARDLQTSCIM_					0	0	0			REV__nc|ENSG00000130164|P01130-2|LDLR	REV__nc|ENSG00000130164|P01130-2|LDLR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.2753295898438	2	569.273183	1136.53181	0.84528	0.0004812	2.2099	0.001258	3.0552	0.0017392	569.2743528897015	58.33	0.66	58.883	58.597	59.257	0.55323					39	15	4	0	0	0	0.66675	1	6128	6128		46.457	5.0302	1	551550	+		2105	18852	1436	1438	2505	2505					-0.03099066002823747
ARDLSQGG	8	Unmodified	_ARDLSQGG_					0	0	0			REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.20526123046875	2	402.203941	802.39333	3.1805	0.0012792	1.1816	0.00047524	4.3621	0.0017545	402.20435516833464	98.401	2.1792	98.45	97.455	99.634	0.048157					140	50	4	0	0	0	0.87064	1	10459	10459		29.15	0	1	1692900	+		2106	18653	1437	1439	2506	2506					-0.01577104864611556
AREAKLLR	8	Unmodified	_AREAKLLR_					0	0	0			REV__ENSG00000261150|ENST00000615648|EPPK1	REV__ENSG00000261150|ENST00000615648|EPPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.80517578125	2	478.803626	955.592698	-0.025303	-1.2115E-05	4.3741	0.0020944	4.3488	0.0020822	478.80566496431277	41.493	1.1693	41.447	40.834	42.003	-0.045471					50	34	2	0	0	0	0.81897	1	2679	2679		20.947	0.95016	1	322860	+		2107	23941	1438	1440	2507	2507					0.11312575153942817
AREGSLTK	8	Unmodified	_AREGSLTK_					0	0	0		nc|ENSG00000137936|O75815-3|BCAR3;ENSG00000137936|ENST00000260502|BCAR3	nc|ENSG00000137936|O75815-3|BCAR3	nc|ENSG00000137936|O75815-3|BCAR3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.5129699707031	2	431.243067	860.47158	0.50042	0.0002158	-0.39529	-0.00017046	0.10513	4.5337E-05	431.2428503731435	22.432	0.4866	21.822	21.633	22.12	-0.6107					17	11	2	0	0	0	0.4196	1	905	905		37.159	9.2769	1	63353			2108	4245	1439	1441	2508	2508					0.03576327720611516
AREKVLQTLGV	11	Unmodified	_AREKVLQTLGV_					0	0	0		ENSG00000120725|ENST00000394817|SIL1	ENSG00000120725|ENST00000394817|SIL1	ENSG00000120725|ENST00000394817|SIL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.2461853027344	3	405.24695	1212.71902	1.0635	0.00043097	-0.64433	-0.00026111	0.41915	0.00016986	405.2465768037405	23.434	2.4302	22.86	22.409	24.839	-0.57415					118	56	3	0	0	0	0.53461	1	1030	1030		49.466	4.4436	1	383090			2109	3149	1440	1442	2509	2509					0.12117036868539799
ARERPAALG	9	Unmodified	_ARERPAALG_					0	0	0			REV__ENST00000572585.5_1_17:909322-915797:-|nuORF	REV__ENST00000572585.5_1_17:909322-915797:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7691345214844	2	470.769783	939.525013	-1.6002	-0.00075333	-0.071841	-3.3821E-05	-1.6721	-0.00078715	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.78983	1	4478	4478		27.882	1.0861	1	1490800	+		2110	28948	1441	1443	2510	2510					0.05283125223127172
AREVGLVRKL	10	Unmodified	_AREVGLVRKL_					0	0	0			REV__ENSG00000243896|ENST00000641841|OR2A7	REV__ENSG00000243896|ENST00000641841|OR2A7	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.712646484375	2	570.864215	1139.71388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.658	1	15.716	15.216	16.216	0.057872								0	0	0	0.45132	1	59	59		19.997	2.5288	1		+		2111	22407	1442	1444	2511	2511					0.1496077779661391
AREYEKII	8	Unmodified	_AREYEKII_					0	0	0			REV__nc|ENSG00000133115|Q8TAV4-2|STOML3	REV__nc|ENSG00000133115|Q8TAV4-2|STOML3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.2850036621094	2	511.287474	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.68	1	36.704	36.204	37.204	0.023624								0	0	0	0.29816	1	2040	2040		38.806	6.8513	1		+		2112	19059	1443	1445	2512	2512					0.05093742960275449
ARFLPTHK	8	Unmodified	_ARFLPTHK_					0	0	0			REV__nc|ENSG00000119509|Q9Y283-2|INVS	REV__nc|ENSG00000119509|Q9Y283-2|INVS	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2857971191406	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.132	1	58.242	57.742	58.742	0.11027								0	0	0	0.29816	1	4945	4945		38.806	3.6054	1		+		2113	18355	1444	1446	2513	2513					0.07004903608174118
ARFLPTHK	8	Unmodified	_ARFLPTHK_					0	0	0			REV__nc|ENSG00000119509|Q9Y283-2|INVS	REV__nc|ENSG00000119509|Q9Y283-2|INVS	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2863464355469	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.713	1	74.845	74.345	75.345	0.13208								0	0	0	0.29344	1	6922	6922		31.955	0	1		+		2114	18355	1444	1446	2514	2514					0.07004903608174118
ARFPFRVGL	9	Unmodified	_ARFPFRVGL_					0	0	0		nc|ENSG00000081842|Q9UN73-3|PCDHA6;ENSG00000081842|ENST00000529310|PCDHA6	nc|ENSG00000081842|Q9UN73-3|PCDHA6	nc|ENSG00000081842|Q9UN73-3|PCDHA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.81689453125	2	531.813993	1061.61343	1.595	0.00084823	3.7944	0.0020179	5.3894	0.0028661	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.78536	1	8804	8804		29.15	0	1	1345000			2115	1471	1445	1447	2515	2515					0.0850916553361003
ARFPGVGVLP	10	Unmodified	_ARFPGVGVLP_					0	0	0		nc|ENSG00000049540|P15502-8|ELN;nc|ENSG00000049540|P15502-7|ELN;nc|ENSG00000049540|P15502-6|ELN;nc|ENSG00000049540|P15502-12|ELN;nc|ENSG00000049540|P15502-13|ELN;nc|ENSG00000049540|P15502-5|ELN;ENSG00000049540|ENST00000252034|ELN;nc|ENSG00000049540|P15502-1|ELN;nc|ENSG00000049540|P15502-4|ELN;nc|ENSG00000049540|P15502-10|ELN;nc|ENSG00000049540|P15502|ELN;nc|ENSG00000049540|P15502-9|ELN	nc|ENSG00000049540|P15502-8|ELN	nc|ENSG00000049540|P15502-8|ELN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8014221191406	2	506.800552	1011.58655	-0.82989	-0.00042059	1.9991	0.0010131	1.1692	0.00059253	506.80152875358044	53.728	1.1104	53.75	53.327	54.438	0.022541					49	31	2	0	0	0	0.8608	1	4765	4765		34.173	3.6689	1	190510			2116	986	1446	1448	2516	2516					0.0812205692243424
ARFPGVGVLP	10	Unmodified	_ARFPGVGVLP_					0	0	0		nc|ENSG00000049540|P15502-8|ELN;nc|ENSG00000049540|P15502-7|ELN;nc|ENSG00000049540|P15502-6|ELN;nc|ENSG00000049540|P15502-12|ELN;nc|ENSG00000049540|P15502-13|ELN;nc|ENSG00000049540|P15502-5|ELN;ENSG00000049540|ENST00000252034|ELN;nc|ENSG00000049540|P15502-1|ELN;nc|ENSG00000049540|P15502-4|ELN;nc|ENSG00000049540|P15502-10|ELN;nc|ENSG00000049540|P15502|ELN;nc|ENSG00000049540|P15502-9|ELN	nc|ENSG00000049540|P15502-8|ELN	nc|ENSG00000049540|P15502-8|ELN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80084228515625	2	506.800552	1011.58655	0.39221	0.00019877	1.0694	0.00054199	1.4616	0.00074076	506.8009595344728	54.462	0.67477	54.543	54.255	54.93	0.081524					28	18	2	0	0	0	0.85939	1	4507	4507		23.042	0	1	169100			2117	986	1446	1448	2517	2517					0.0812205692243424
ARGAALDNVLF	11	Unmodified	_ARGAALDNVLF_					0	0	0			REV__ENSG00000128011|ENST00000248668|LRFN1	REV__ENSG00000128011|ENST00000248668|LRFN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.2608642578125	2	573.81693	1145.61931	-0.71474	-0.00041013	-0.51757	-0.00029699	-1.2323	-0.00070712	574.3179377323949	37.037	0.22182	36.983	36.828	37.049	-0.053558					6	4	2	0	0	0	0.17387	1	2501	2501		23.523	7.0495	1	23582	+		2118	18759	1447	1449	2518	2518					0.052322192545943835
ARGAEPALL	9	Unmodified	_ARGAEPALL_					0	0	0			REV__nc|ENSG00000185963|Q8TD16|BICD2	REV__nc|ENSG00000185963|Q8TD16|BICD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.2607116699219	2	449.261259	896.507966	0.086224	3.8737E-05	-2.0246	-0.00090958	-1.9384	-0.00087084	449.2601788042096	68.841	0.73721	68.874	68.516	69.253	0.033005					47	30	2	0	0	0	0.77244	1	6575	6575		32.812	2.3088	1	184640	+		2119	22814	1448	1450	2519	2519					0.055572046173210765
ARGAFRFVKR	10	Unmodified	_ARGAFRFVKR_					0	0	0			REV__ENST00000502408.1_1_5:76326323-76330256:+|nuORF	REV__ENST00000502408.1_1_5:76326323-76330256:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3650512695312	2	604.362173	1206.70979	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.55	1	115.53	115.03	116.03	-0.02433								0	0	0	0.45132	1	12796	12796		3.1592	0	1		+		2120	24918	1449	1451	2520	2520					0.11470733093551644
ARGARLSPAA	10	Unmodified	_ARGARLSPAA_					0	0	0			REV__ENST00000608517.1_1_1:178694567-178695308:-|nuORF	REV__ENST00000608517.1_1_1:178694567-178695308:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.286376953125	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.19	1	71.32	70.82	71.82	0.12965								0	0	0	0.45132	1	6485	6485		25.574	2.5373	1		+		2121	29398	1450	1452	2521	2521					0.06602814114467037
ARGAVSGW	8	Unmodified	_ARGAVSGW_					0	0	0		ENST00000286091.8_1_7:148700270-148700423:-|nuORF	ENST00000286091.8_1_7:148700270-148700423:-|nuORF	ENST00000286091.8_1_7:148700270-148700423:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.211181640625	2	402.211569	802.408586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.328	1	77.42	76.92	77.92	0.091438								0	0	0	0.29344	1	7226	7226		31.955	0	1				2122	9653	1451	1453	2522	2522					-0.0005219327675831664
ARGCRPARPL	10	Unmodified	_ARGCRPARPL_					0	0	0			REV__ENST00000328668.7_1_5:149682042-149682378:-|nuORF	REV__ENST00000328668.7_1_5:149682042-149682378:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.3743286132812	2	548.811459	1095.60837	-0.74986	-0.00041153	1.0152	0.00055713	0.26531	0.00014561	548.8126846758094	37.868	0.18457	38.181	38.127	38.312	0.31312					6	4	2	0	0	0	0.37624	1	3077	3077		39.253	9.4113	1	44534	+		2123	25096	1452	1454	2523	2523					0.06438538399333993
ARGCRPARPL	10	Unmodified	_ARGCRPARPL_					0	0	0			REV__ENST00000328668.7_1_5:149682042-149682378:-|nuORF	REV__ENST00000328668.7_1_5:149682042-149682378:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	548.811459	1095.60837	-0.097601	-5.3564E-05	1.5429	0.00084678	1.4453	0.00079322	548.8121169910285	37.91	0.38274	38.433	38.21	38.593	0.52236	0.12574	0.00023146	NaN	39.253	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67453	+		2124	25096	1452	1454							0.06438538399333993
ARGEEACEC	9	Unmodified	_ARGEEACEC_					0	0	0		ENST00000522792.1_1_5:138268134-138269775:+|nuORF	ENST00000522792.1_1_5:138268134-138269775:+|nuORF	ENST00000522792.1_1_5:138268134-138269775:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23602294921875	2	484.184034	966.353515	-0.55127	-0.00026692	1.8405	0.00089113	1.2892	0.00062421	484.1833132136198	84.868	0.3136	85.315	85.196	85.509	0.44736					12	7	3	0	0	0	0.20789	1	9940	9940		37.159	0	1	130620			2125	13192	1453	1455	2524	2524					-0.1310073592186427
ARGEPPHSEL	10	Unmodified	_ARGEPPHSEL_					0	0	0		nc|ENSG00000102572|Q9Y6E0|STK24;ENSG00000102572|ENST00000539966|STK24	nc|ENSG00000102572|Q9Y6E0|STK24	nc|ENSG00000102572|Q9Y6E0|STK24	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8401489257812	2	546.775262	1091.53597	3.3746	0.0018452	-0.26662	-0.00014578	3.108	0.0016994	546.775412905898	101.07	0.20054	101.02	100.92	101.12	-0.052116					7	4	2	0	0	0	0.37624	1	10990	10990		54.776	10.66	1	93091			2126	14824	1454	1456	2525	2525					-0.006135171932328376
ARGIITLIYLF	11	Unmodified	_ARGIITLIYLF_					0	0	0			REV__ENSG00000178719|ENST00000395068|GRINA	REV__ENSG00000178719|ENST00000395068|GRINA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3931274414062	2	640.392273	1278.76999	2.3199	0.0014856	-1.2982	-0.00083133	1.0217	0.00065431	640.3913086567981	50.89	1.1946	51.642	51.12	52.315	0.75174					85	28	4	0	0	0	0.732	1	5037	5037		26.063	5.1165	1	1438200	+		2127	22290	1455	1457	2526	2526					0.14175985913402656
ARGKPLLL	8	Unmodified	_ARGKPLLL_					0	0	0		ENSG00000104976|ENST00000221573|SNAPC2	ENSG00000104976|ENST00000221573|SNAPC2	ENSG00000104976|ENST00000221573|SNAPC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25152587890625	2	434.292362	866.570172	0.27401	0.000119	0.010011	4.3479E-06	0.28402	0.00012335	434.2922288385926	79.979	0.92997	80.506	80.148	81.078	0.52676					30	21	2	0	0	0	0.4196	1	9286	9286		28.254	7.7724	1	220430			2128	2177	1456	1458	2527	2527					0.13154975756322074
ARGKWRRP	8	Unmodified	_ARGKWRRP_					0	0	0		ENST00000497423.1_1_2:30670257-30682528:+|nuORF	ENST00000497423.1_1_2:30670257-30682528:+|nuORF	ENST00000497423.1_1_2:30670257-30682528:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8085327148438	2	513.807034	1025.59952	-0.38907	-0.00019991	4.2671	0.0021925	3.8781	0.0019926	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.884	1	3710	3710		33.516	1.5607	1	1358900			2129	12805	1457	1459	2528	2528					0.08773932825192787
ARGLGQLH	8	Unmodified	_ARGLGQLH_					0	0	0			REV__ENST00000319551.12_1_7:149412416-149417105:+|nuORF	REV__ENST00000319551.12_1_7:149412416-149417105:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.1914978027344	2	426.245944	850.477334	-1.096	-0.00046718	1.4975	0.0006383	0.40146	0.00017112	426.2464995636383	90.072	1.9998	90.543	90.243	92.243	0.47068					81	49	2	0	0	0	0.4196	1	10888	10888		50.025	5.4935	1	302490	+		2130	24988	1458	1460	2529	2529					0.046114710229517186
ARGLLPKI	8	Unmodified	_ARGLLPKI_					0	0	0		ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.2907409667969	2	434.292362	866.570172	0.055393	2.4057E-05	3.1394	0.0013634	3.1948	0.0013875	434.2922901424792	77.385	1.709	77.791	77.3	79.009	0.4053					103	41	4	0	0	0	0.84341	2	8801	8801;8814		30.504	5.0535	1	514170			2131	5236	1459	1461	2530;2531	2530					0.13154975756322074
ARGLLPKI	8	Unmodified	_ARGLLPKI_					0	0	0		ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.291015625	2	434.292362	866.570172	0.19803	8.6003E-05	2.6646	0.0011572	2.8627	0.0012432	434.2922263287595	77.142	1.7516	77.711	77.417	79.168	0.56836					96	41	4	0	0	0	0.87479	1	8809	8809		30.504	3.7075	1	559930			2132	5236	1459	1461	2532	2532					0.13154975756322074
ARGLPEDL	8	Unmodified	_ARGLPEDL_					0	0	0			REV__nc|ENSG00000140481|Q8N5R6|CCDC33	REV__nc|ENSG00000140481|Q8N5R6|CCDC33	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799377441406	2	435.737617	869.460681	0.024669	1.0749E-05	0.42791	0.00018646	0.45258	0.0001972	435.73761072151166	36.091	0.52064	36.03	35.752	36.272	-0.060333					22	13	2	0	0	0	0.4196	1	1979	1979		44.117	12.162	1	108420	+		2133	29891	1460	1462	2533	2533					0.020729253463287023
ARGLRLASI	9	Unmodified	_ARGLRLASI_					0	0	0		ENST00000568980.1_1_15:34781792-34782686:-|nuORF	ENST00000568980.1_1_15:34781792-34782686:-|nuORF	ENST00000568980.1_1_15:34781792-34782686:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.80615234375	2	478.803626	955.592698	0.24724	0.00011838	4.3933	0.0021035	4.6405	0.0022219	478.8055593968592	41.183	1.271	41.256	40.938	42.209	0.073414					62	33	2	0	0	0	0.76764	1	2684	2684		34.173	2.2177	1	199990			2134	13974	1461	1463	2534	2534					0.11312575153931448
ARGLSIFLIS	10	Unmodified	_ARGLSIFLIS_					0	0	0			REV__ENST00000284617.6_1_1:229460549-229460678:-|nuORF	REV__ENST00000284617.6_1_1:229460549-229460678:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8274536132812	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.68	1	118.66	118.16	119.16	-0.024208								0	0	0	0.45132	1	13150	13150		25.574	3.6142	1		+		2135	24629	1462	1464	2535	2535					0.1041859526535518
ARGLVVKP	8	Unmodified	_ARGLVVKP_					0	0	0		nc|ENSG00000176406|Q9UQ26-3|RIMS2;nc|ENSG00000176406|Q9UQ26-1|RIMS2;nc|ENSG00000176406|Q9UQ26-8|RIMS2;nc|ENSG00000176406|Q9UQ26|RIMS2;ENSG00000176406|ENST00000696799|RIMS2;nc|ENSG00000176406|Q9UQ26-7|RIMS2	nc|ENSG00000176406|Q9UQ26-3|RIMS2	nc|ENSG00000176406|Q9UQ26-3|RIMS2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77471923828125	2	420.276712	838.538872	-0.73746	-0.00030994	0.56046	0.00023555	-0.177	-7.4388E-05	420.2770061382636	52.127	1.3657	52.103	51.652	53.018	-0.023849					35	32	2	0	0	0	0.4196	1	4627	4627		18.324	5.3652	1	98839			2136	7079	1463	1465	2536	2536					0.11314402722223349
ARGPAERL	8	Unmodified	_ARGPAERL_					0	0	0		ENST00000321751.9_1_1:1309740-1310526:-|nuORF	ENST00000321751.9_1_1:1309740-1310526:-|nuORF	ENST00000321751.9_1_1:1309740-1310526:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.251708984375	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.89043	1	9252	9252		35.618	0	1	2235800			2137	10041	1464	1466	2537	2537					0.048394536773685104
ARGPGCGAH	9	Unmodified	_ARGPGCGAH_					0	0	0			REV__ENST00000301327.4_1_8:145734706-145735743:+|nuORF	REV__ENST00000301327.4_1_8:145734706-145735743:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1940002441406	2	413.192854	824.371155	0.80605	0.00033306	0.72513	0.00029962	1.5312	0.00063267	413.1932379055747	78.047	2.9824	78.452	77.977	80.959	0.4053					181	70	5	0	0	0	0.77546	1	9052	9052		31.955	2.1133	1	5554900	+		2138	24762	1465	1467	2538	2538					-0.048056078140234604
ARGPGCGAH	9	Unmodified	_ARGPGCGAH_					0	0	0			REV__ENST00000301327.4_1_8:145734706-145735743:+|nuORF	REV__ENST00000301327.4_1_8:145734706-145735743:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1935119628906	2	413.192854	824.371155	0.37594	0.00015534	0.49279	0.00020362	0.86873	0.00035895	413.1933424358141	82.469	1.3874	82.896	82.352	83.74	0.42663					91	33	5	0	0	0	0.76996	1	9572	9572		33.516	3.674	1	2821200	+		2139	24762	1465	1467	2539	2539					-0.048056078140234604
ARGPGCGAH	9	Unmodified	_ARGPGCGAH_					0	0	0			REV__ENST00000301327.4_1_8:145734706-145735743:+|nuORF	REV__ENST00000301327.4_1_8:145734706-145735743:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.1828308105469	2	413.192854	824.371155	0.47446	0.00019604	0.7555	0.00031217	1.23	0.00050821	413.1932234322015	81.187	1.8263	81.609	80.637	82.464	0.4215					96	44	5	0	0	0	0.20789	1	9459	9459		12.959	0	1	768830	+		2140	24762	1465	1467	2540	2540					-0.048056078140234604
ARGPGGRH	8	Unmodified	_ARGPGGRH_					0	0	0		nc|ENSG00000073670|O75078-2|ADAM11	nc|ENSG00000073670|O75078-2|ADAM11	nc|ENSG00000073670|O75078-2|ADAM11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9104919433594	2	404.22026	806.425967	-0.32854	-0.0001328	3.059	0.0012365	2.7305	0.0011037	404.22148660205556	68.014	0.58316	68.562	68.409	68.993	0.54819					20	13	2	0	0	0	0.4196	1	7542	7542		7.1934	0	1	79348			2141	14777	1466	1468	2541	2541					0.015011470488957457
ARGPMQAL	8	Unmodified	_ARGPMQAL_					0	0	0			REV__ENST00000393721.5_2_X:153172840-153173077:-|nuORF	REV__ENST00000393721.5_2_X:153172840-153173077:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.22808837890625	2	422.228905	842.443257	-0.13065	-5.5165E-05	-2.0488	-0.00086508	-2.1795	-0.00092024	422.22796406117556	54.637	1.4643	55.205	54.858	56.322	0.56836					63	34	3	0	0	0	0.87922	1	5575	5575		31.955	1.4512	1	943930	+		2142	26062	1467	1469	2542	2542					0.01573306539683017
ARGPPPLP	8	Unmodified	_ARGPPPLP_					0	0	0			REV__ENST00000394480.6_1_15:88690622-88799253:-|nuORF	REV__ENST00000394480.6_1_15:88690622-88799253:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.7392578125	2	402.739963	803.465373	-1.9105	-0.00076942	0.90285	0.00036361	-1.0076	-0.00040581	402.74023585359686	35.547	1.7419	35.578	35.255	36.997	0.031132					93	49	3	0	0	0	0.81548	1	1903	1903		20.482	1.1219	1	194790	+		2143	26082	1468	1470	2543	2543					0.05577854279761141
ARGPRPQS	8	Unmodified	_ARGPRPQS_					0	0	0		ENST00000432853.1_1_2:132592224-132593771:-|nuORF	ENST00000432853.1_1_2:132592224-132593771:-|nuORF	ENST00000432853.1_1_2:132592224-132593771:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30023193359375	2	434.741025	867.467498	0.048721	2.1181E-05	4.3263	0.0018808	4.375	0.001902	434.742432789779	68.858	0.12573	69.405	69.324	69.45	0.54694					4	2	2	0	0	0	0.4196	1	7607	7607		23.042	3.6825	1	15482			2144	11675	1469	1471	2544	2544					0.028462830175726594
ARGPTAPR	8	Unmodified	_ARGPTAPR_					0	0	0		ENST00000478256.6_1_X:1407516-1407782:+|nuORF;nc|ENSG00000292357|P15509-6|CSF2RA;nc|ENSG00000292357|P15509-8|CSF2RA;nc|ENSG00000292357|P15509-4|CSF2RA;nc|ENSG00000292357|P15509-3|CSF2RA;nc|ENSG00000292357|P15509-5|CSF2RA;ENSG00000198223|ENST00000381529|CSF2RA;nc|ENSG00000292357|P15509-2|CSF2RA;nc|ENSG00000292357|P15509-7|CSF2RA	ENST00000478256.6_1_X:1407516-1407782:+|nuORF	ENST00000478256.6_1_X:1407516-1407782:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2384338378906	2	413.238119	824.461684	-0.091267	-3.7715E-05	0.27761	0.00011472	0.18635	7.7005E-05	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.86677	1	8701	8701		27.882	5.9224	1	1247200			2145	8258	1470	1472	2545	2545					0.04243184505901354
ARGPVALW	8	Unmodified	_ARGPVALW_					0	0	0			REV__nc|ENSG00000167889|Q3V5L5-5|MGAT5B	REV__nc|ENSG00000167889|Q3V5L5-5|MGAT5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2524108886719	2	435.253237	868.491922	-1.5314	-0.00066653	-2.8716	-0.0012499	-4.4029	-0.0019164	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.89457	1	7277	7277		37.028	1.4102	1	2494100	+		2146	15667	1471	1473	2546	2546					0.0524154317108696
ARGQLFRLRRH	11	Unmodified	_ARGQLFRLRRH_					0	0	0		nc|ENSG00000223519|B7ZC32|KIF28P	nc|ENSG00000223519|B7ZC32|KIF28P	nc|ENSG00000223519|B7ZC32|KIF28P	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.6156921386719	3	470.616482	1408.82762	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.739	1	62.733	62.233	63.233	-0.0055504								0	0	0	0.56276	1	5822	5822		12.957	2.3707	1				2147	15262	1472	1474	2547	2547					0.1395568568220824
ARGRIPVAQKR	11	Unmodified	_ARGRIPVAQKR_					0	0	0		ENSG00000163563|ENST00000368141|MNDA	ENSG00000163563|ENST00000368141|MNDA	ENSG00000163563|ENST00000368141|MNDA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3912963867188	2	626.391462	1250.76837	6.325	0.0039619	2.012	0.0012603	8.337	0.0052222	626.3925398868604	109.87	0.514	109.94	109.72	110.23	0.068001					34	23	3	0	0	0	0.6921	1	13343	13343		32.812	3.6629	1	960900			2148	5825	1473	1475	2548	2548					0.1530178966800122
ARGRSHGA	8	Unmodified	_ARGRSHGA_					0	0	0		ENSG00000102901|ENST00000562787|CENPT;ENST00000436104.6_1_16:67865250-67867798:-|nuORF;nc|ENSG00000102901|Q96BT3-2|CENPT;ENST00000565157.5_1_16:67864257-67867798:-|nuORF;nc|ENSG00000102901|Q96BT3-3|CENPT;ENST00000564128.1_1_16:67866129-67867804:-|nuORF;ENST00000569862.5_1_16:67865986-67867804:-|nuORF	ENSG00000102901|ENST00000562787|CENPT;nc|ENSG00000102901|Q96BT3-3|CENPT	nc|ENSG00000102901|Q96BT3-3|CENPT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.21759033203125	2	406.217717	810.420882	2.9241	0.0011878	-3.1263	-0.0012699	-0.20219	-8.2134E-05	406.2163885181213	85.735	1.3725	85.793	85.282	86.655	0.057899					48	31	2	0	0	0	0.80959	1	8709	8709		15.642	1.8665	1	240170			2149	2030;13882	1474	1476	2549	2549					0.008088431862802281
ARGRVPPTS	9	Unmodified	_ARGRVPPTS_					0	0	0			REV__nc|ENSG00000134222|Q6PGN9-3|PSRC1	REV__nc|ENSG00000134222|Q6PGN9-3|PSRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7688903808594	2	470.769783	939.525013	-0.46989	-0.00022121	-1.5944	-0.00075061	-2.0643	-0.00097182	470.768898093518	52.94	1.6168	52.866	52.471	54.088	-0.074509					101	42	3	0	0	0	0.47272	1	4323	4323		53.351	2.016	1	1875900	+		2150	29856	1475	1477	2550	2550					0.052831252231385406
ARGSFSPELD	10	Unmodified	_ARGSFSPELD_					0	0	0		ENST00000502586.5_3_4:146019510-146025602:+|nuORF	ENST00000502586.5_3_4:146019510-146025602:+|nuORF	ENST00000502586.5_3_4:146019510-146025602:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.7648315429688	2	539.76182	1077.50909	0.40301	0.00021753	3.2938	0.0017778	3.6968	0.0019954	539.7636263325178	76.329	0.47797	76.377	76.104	76.582	0.047981					31	18	2	0	0	0	0.86218	1	7463	7463		32.812	3.6629	1	87616			2151	12858	1476	1478	2551	2551					-0.026566258044113056
ARGSGLAPA	9	Unmodified	_ARGSGLAPA_					0	0	0			REV__nc|ENSG00000196689|Q8NER1-3|TRPV1	REV__nc|ENSG00000196689|Q8NER1-3|TRPV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.22625732421875	2	400.224677	798.434801	1.8836	0.00075385	2.9405	0.0011769	4.8241	0.0019307	400.22567128573456	34.872	1.5031	35.082	34.854	36.357	0.21003					89	38	3	0	0	0	0.58668	1	2747	2747		47.657	3.5405	1	1257500	+		2152	28966	1477	1479	2552	2552					0.027520758947048307
ARGSLKPKS	9	Unmodified	_ARGSLKPKS_					0	0	0		AluJo_dup65419|chr17:39969075-39969366:+|19.918482376258485|0.0005811066129645|15.06|60.0|9|3|sense	AluJo_dup65419|chr17:39969075-39969366:+|19.918482376258485|0.0005811066129645|15.06|60.0|9|3|sense	AluJo_dup65419|chr17:39969075-39969366:+|19.918482376258485|0.0005811066129645|15.06|60.0|9|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2884216308594	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.7932	1	10134	10134		21.96	1.013	1	40161000			2153	1	1478	1480	2553	2553					0.0874858239999412
ARGSLSVED	9	Unmodified	_ARGSLSVED_					0	0	0		nc|ENSG00000162946|Q9NRI5-2|DISC1;ENSG00000162946|ENST00000439617|DISC1;ENST00000422590.6_1_1:231829618-232144897:+|nuORF	nc|ENSG00000162946|Q9NRI5-2|DISC1	nc|ENSG00000162946|Q9NRI5-2|DISC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.2353820800781	2	467.235439	932.456324	-1.0422	-0.00048693	-3.449	-0.0016115	-4.4912	-0.0020984	467.23380164983837	67.827	1.4777	67.962	67.582	69.06	0.13521					154	58	4	0	0	0	0.78536	1	6148	6148		29.15	1.2673	1	2802800			2154	5753	1479	1481	2554	2554					-0.012605838672357095
ARGTHVKG	8	Unmodified	_ARGTHVKG_					0	0	0			REV__ENST00000599380.5_1_19:17581362-17608411:+|nuORF	REV__ENST00000599380.5_1_19:17581362-17608411:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2378845214844	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.87922	1	7194	7194		31.955	3.7006	1	2127000	+		2155	29298	1480	1482	2555	2555					0.04243184505901354
ARGTLVPWSQH	11	Unmodified	_ARGTLVPWSQH_					0	0	0		ENST00000532739.1_1_16:16453883-16454575:+|nuORF	ENST00000532739.1_1_16:16453883-16454575:+|nuORF	ENST00000532739.1_1_16:16453883-16454575:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.89154052734375	3	417.891278	1250.652	2.3929	0.00099997	-2.0347	-0.0008503	0.35815	0.00014967	417.89037407921217	31.56	0.8986	31.553	31.142	32.04	-0.0061455					48	20	3	0	0	0	0.69687	1	1740	1740		32.034	3.4574	1	148180			2156	13383	1481	1483	2556	2556					0.03670426377448166
ARGVDVRP	8	Unmodified	_ARGVDVRP_					0	0	0			REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2515869140625	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.89043	2	7368	7368;7435		44.117	5.3107	1	1788100	+		2157	20556	1482	1484	2557;2558	2557					0.04839453677379879
ARGVDVRP	8	Unmodified	_ARGVDVRP_					0	0	0			REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2513427734375	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.8537	6	7740	7740;7821;7958;7982;8162;8174		38.806	5.0535	1	2823900	+		2158	20556	1482	1484	2559;2560;2561;2562;2563;2564	2559					0.04839453677379879
ARGVDVRP	8	Unmodified	_ARGVDVRP_					0	0	0			REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2516174316406	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.87479	1	7788	7788		30.504	2.6214	1	3292300	+		2159	20556	1482	1484	2565	2565					0.04839453677379879
ARGVDVRP	8	Unmodified	_ARGVDVRP_					0	0	0			REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2514343261719	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.86677	1	8084	8084		27.882	1.0861	1	3370400	+		2160	20556	1482	1484	2566	2566					0.04839453677379879
ARGVDVRP	8	Unmodified	_ARGVDVRP_					0	0	0			REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25164794921875	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.87479	1	7871	7871		30.504	1.3541	1	3322700	+		2161	20556	1482	1484	2567	2567					0.04839453677379879
ARGVDVRP	8	Unmodified	_ARGVDVRP_					0	0	0			REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2513732910156	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.86677	2	7536	7536;8011		37.159	2.4321	1	2743300	+		2162	20556	1482	1484	2568;2569	2568					0.04839453677379879
ARGVDVRP	8	Unmodified	_ARGVDVRP_					0	0	0			REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	REV__nc|ENSG00000157617|Q9Y426-2|C2CD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2514953613281	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87479	3	7685	7685;7838;7850		40.778	5.1599	1	2494100	+		2163	20556	1482	1484	2570;2571;2572	2570					0.04839453677379879
ARGVKGSPVP	10	Unmodified	_ARGVKGSPVP_					0	0	0			REV__ENST00000471490.1_1_21:45539071-45541135:+|nuORF	REV__ENST00000471490.1_1_21:45539071-45541135:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7186584472656	2	484.287808	966.561064	2.0526	0.00099403	-1.7673	-0.00085588	0.28525	0.00013814	484.2887450952596	100.93	0.24438	101.28	101.14	101.38	0.34591					7	5	2	0	0	0	0.37624	1	12273	12273		32.812	0	1	43065	+		2164	27232	1483	1485	2573	2573					0.07644582400007494
ARGVRGLN	8	Unmodified	_ARGVRGLN_					0	0	0			REV__ENST00000325404.2_1_3:181431262-181431475:+|nuORF	REV__ENST00000325404.2_1_3:181431262-181431475:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7513732910156	2	421.751393	841.488233	-0.10002	-4.2183E-05	0.32598	0.00013748	0.22596	9.5298E-05	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.87479	1	7704	7704		30.504	0	1	579450	+		2165	25062	1484	1486	2574	2574					0.061148733972345326
ARGVWKVGP	9	Unmodified	_ARGVWKVGP_					0	0	0			REV__ENST00000568043.5_1_16:30007580-30007859:+|nuORF	REV__ENST00000568043.5_1_16:30007580-30007859:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.28656005859375	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.063	1	75.109	74.609	75.609	0.045959								0	0	0	0.30053	1	7200	7200		30.504	3.7075	1		+		2166	28891	1485	1487	2575	2575					0.07004903608185487
ARGWLVAP	8	Unmodified	_ARGWLVAP_					0	0	0			REV__ENST00000546023.1_1_6:160210088-160210586:-|nuORF	REV__ENST00000546023.1_1_6:160210088-160210586:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2531433105469	2	435.253237	868.491922	-0.16621	-7.2343E-05	-4.2181	-0.0018359	-4.3843	-0.0019083	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.89457	1	7386	7386		37.028	1.4102	1	768200	+		2167	28535	1486	1488	2576	2576					0.0524154317108696
ARHLASQT	8	Unmodified	_ARHLASQT_					0	0	0			REV__ENSG00000163156|ENST00000368905|SCNM1	REV__ENSG00000163156|ENST00000368905|SCNM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2409973144531	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.87064	1	7194	7194		29.15	3.6994	1	716910	+		2168	20886	1487	1489	2577	2577					0.021228632976999506
ARHLYLPI	8	Unmodified	_ARHLYLPI_					0	0	0			REV__ENSG00000183018|ENST00000329078|SPNS2	REV__ENSG00000183018|ENST00000329078|SPNS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7955017089844	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.83466	1	4711	4711		23.037	2.5549	1	2075300	+		2169	22566	1488	1490	2578	2578					0.08446074267999393
ARHPALGAG	9	Unmodified	_ARHPALGAG_					0	0	0		ENST00000310924.6_1_17:77984337-77984529:-|nuORF	ENST00000310924.6_1_17:77984337-77984529:-|nuORF	ENST00000310924.6_1_17:77984337-77984529:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.30572509765625	2	425.238119	848.461684	0.8884	0.00037778	-0.77484	-0.00032949	0.11356	4.8291E-05	425.237612303466	22.968	0.74524	22.549	22.105	22.85	-0.41879					19	17	2	0	0	0	0.20789	1	996	996		30.504	24.583	1	28756			2170	9916	1489	1491	2579	2579					0.031391845059033585
ARHPHPVSPK	10	Unmodified	_ARHPHPVSPK_					0	0	0			REV__ENST00000473243.5_1_19:19756247-19758388:-|nuORF	REV__ENST00000473243.5_1_19:19756247-19758388:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	563.3157348632812	2	563.317432	1124.62031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.143	1	56.106	55.606	56.606	-0.036827								0	0	0	0.45132	1	4737	4737		32.812	0.85756	1		+		2171	27198	1490	1492	2580	2580					0.0629847841416904
ARHSDSPA	8	Unmodified	_ARHSDSPA_					0	0	0		ENSG00000189325|ENST00000437635|BNIP5	ENSG00000189325|ENST00000437635|BNIP5	ENSG00000189325|ENST00000437635|BNIP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.70379638671875	2	420.701566	839.388579	1.2206	0.00051351	4.1	0.0017249	5.3206	0.0022384	420.7031344648382	36.012	0.90686	36.021	35.705	36.612	0.0092773					38	19	3	0	0	0	0.90465	1	2320	2320		40.573	4.9543	1	139740			2172	8003	1491	1493	2581	2581					-0.03753989007384462
ARHSTCKDSGH	11	Unmodified	_ARHSTCKDSGH_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2;ENST00000527850.5_1_11:65029833-65063521:+|nuORF	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.776611328125	2	599.772728	1197.5309	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.108	1	44.075	43.575	44.575	-0.033474								0	0	0	0.56276	1	3495	3495		29.17	1.2878	1				2173	13378;814	1492	1494	2582	2582					-0.0599614432751423
ARIATGPPP	9	Unmodified	_ARIATGPPP_					0	0	0			REV__nc|ENSG00000078900|O15350-12|TP73	REV__nc|ENSG00000078900|O15350-12|TP73	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2567443847656	2	440.255977	878.497401	-1.2748	-0.00056124	0.7584	0.00033389	-0.51639	-0.00022734	440.2563782510852	72.993	0.8905	73.076	72.548	73.438	0.083145					44	30	2	0	0	0	0.72402	1	6708	6708		38.806	3.6054	1	106400	+		2174	16775	1493	1495	2583	2583					0.05329221962892916
ARIATGPPP	9	Unmodified	_ARIATGPPP_					0	0	0			REV__nc|ENSG00000078900|O15350-12|TP73	REV__nc|ENSG00000078900|O15350-12|TP73	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	440.255977	878.497401	-0.15763	-6.9398E-05	-1.6454	-0.00072438	-1.803	-0.00079378	440.25484524424064	73.298	0.40173	73.338	73.046	73.447	0.040024	0.25523	-0.0010515	NaN	38.806	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73900	+		2175	16775	1493	1495							0.05329221962892916
ARIATGPPP	9	Unmodified	_ARIATGPPP_					0	0	0			REV__nc|ENSG00000078900|O15350-12|TP73	REV__nc|ENSG00000078900|O15350-12|TP73	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	440.255977	878.497401	-0.60063	-0.00026443	0.27886	0.00012277	-0.32177	-0.00014166	440.25539034692684	73.23	0.51779	73.188	72.743	73.261	-0.042007	0.1045	0.00064284	NaN	38.806	27	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76349	+		2176	16775	1493	1495							0.05329221962892916
ARIATGPPP	9	Unmodified	_ARIATGPPP_					0	0	0			REV__nc|ENSG00000078900|O15350-12|TP73	REV__nc|ENSG00000078900|O15350-12|TP73	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	440.255977	878.497401	-1.478	-0.00065068	0.47522	0.00020922	-1.0027	-0.00044147	440.2561195137012	72.782	0.87558	72.911	72.417	73.293	0.1292	-0.17169	0.00081574	NaN	38.806	39	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128000	+		2177	16775	1493	1495							0.05329221962892916
ARIATGPPP	9	Unmodified	_ARIATGPPP_					0	0	0			REV__nc|ENSG00000078900|O15350-12|TP73	REV__nc|ENSG00000078900|O15350-12|TP73	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	440.255977	878.497401	-1.2748	-0.00056124	0.7584	0.00033389	-0.51639	-0.00022734	440.2563782510852	72.993	0.8905	73.076	72.548	73.438	0.083145	-0.0070632	0.0010651	NaN	38.806	44	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106400	+		2178	16775	1493	1495							0.05329221962892916
ARIGSDPQTQG	11	Unmodified	_ARIGSDPQTQG_					0	0	0			REV__ENST00000431489.5_1_2:62932928-62934072:+|nuORF	REV__ENST00000431489.5_1_2:62932928-62934072:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	565.280517578125	2	565.283451	1128.55235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.795	1	63.915	63.415	64.415	0.12004								0	0	0	0.56276	1	5593	5593		30.569	2.6866	1		+		2179	26617	1494	1496	2584	2584					-0.006784360271467449
ARIIRVTQ	8	Unmodified	_ARIIRVTQ_					0	0	0			REV__ENSG00000278540|ENST00000616317|ACACA	REV__ENSG00000278540|ENST00000616317|ACACA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8048095703125	2	478.803626	955.592698	0.30032	0.0001438	4.0728	0.0019501	4.3731	0.0020939	478.8054155827557	41.804	1.1764	41.773	41.067	42.244	-0.030991					72	29	3	0	0	0	0.87064	1	3118	3118		29.15	1.2673	1	345190	+		2180	24037	1495	1497	2585	2585					0.11312575153931448
ARIKERQHAL	10	Unmodified	_ARIKERQHAL_					0	0	0			REV__nc|ENSG00000102904|Q2TAA8|TSNAXIP1	REV__nc|ENSG00000102904|Q2TAA8|TSNAXIP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	407.5791931152344	3	407.910672	1220.71019	0.46014	0.0001877	-2.0071	-0.00081871	-1.5469	-0.00063101	407.90987748389716	16.111	0.20723	16.087	15.958	16.165	-0.024035					12	8	2	0	0	0	0.37624	1	99	99		22.58	11.993	1	59782	+		2181	17371	1496	1498	2586	2586					0.1086610802276482
ARIKLAPG	8	Unmodified	_ARIKLAPG_					0	0	0			REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2667541503906	2	413.268887	824.523222	0.16242	6.7124E-05	-1.5091	-0.00062368	-1.3467	-0.00055655	413.2682034631166	37.562	2.2059	37.661	35.983	38.189	0.099277					142	69	3	0	0	0	0.86288	1	2073	2073		26.796	6.3143	1	615840	+		2182	22929	1497	1499	2587	2587					0.1039411620519104
ARIMLLLM	8	Oxidation (M)	_ARIMLLLM(Oxidation (M))_		ARIMLLLM(1)		ARIM(-52)LLLM(52)	0	0	1			REV__nc|ENSG00000284723|Q8NH09|OR8S1	REV__nc|ENSG00000284723|Q8NH09|OR8S1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7891540527344	2	488.787741	975.560929	1.4412	0.00070445	1.6028	0.00078341	3.044	0.0014879	488.78836786844454	102.14	0.87674	102.4	102.03	102.91	0.26323					61	21	5	0	0	0	0.84634	1	12376	12376		60.294	10.269	2	1967000	+		2183	30279	1498	1500	2588	2588		442			0.07217123084160448
ARINALKES	9	Unmodified	_ARINALKES_					0	0	0		ENSG00000169933|ENST00000675598|FRMPD4	ENSG00000169933|ENST00000675598|FRMPD4	ENSG00000169933|ENST00000675598|FRMPD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2905578613281	2	501.290548	1000.56654	2.5474	0.001277	-2.2268	-0.0011163	0.32064	0.00016074	501.28923830834384	99.451	1.7073	99.397	98.735	100.44	-0.053741					93	39	4	0	0	0	0.75725	1	10794	10794		36.447	3.6343	1	1105700			2184	6544	1499	1501	2589	2589					0.06628261191792717
ARISMKMWKL	10	Unmodified	_ARISMKMWKL_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1;ENST00000584897.5_1_18:2726458-2784452:+|nuORF;nc|ENSG00000101596|A6NHR9-3|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	632.3627319335938	2	632.356854	1262.69915	4.0902	0.0025865	2.5994	0.0016437	6.6896	0.0042302	632.3582632957089	102.71	0.67924	103.01	102.81	103.49	0.29865					65	22	3	0	0	0	0.67571	3	12539	12539;12546;12555		45.972	9.5255	1	22472000			2185	1951	1500	1502	2590;2591;2592	2590					0.07831246332602859
ARIWTRIH	8	Unmodified	_ARIWTRIH_					0	0	0		ENST00000450704.1_1_9:46843946-46845151:+|nuORF	ENST00000450704.1_1_9:46843946-46845151:+|nuORF	ENST00000450704.1_1_9:46843946-46845151:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.808349609375	2	526.809242	1051.60393	-0.037043	-1.9515E-05	-2.2057	-0.001162	-2.2427	-0.0011815	526.8079411043393	101.16	2.0772	101.19	100.26	102.33	0.031029					128	48	4	0	0	0	0.47906	2	10808	10808;10820		76.847	12.639	1	2562600			2186	11892	1501	1503	2593;2594	2593					0.08019397248085625
ARIWTRIH	8	Unmodified	_ARIWTRIH_					0	0	0		ENST00000450704.1_1_9:46843946-46845151:+|nuORF	ENST00000450704.1_1_9:46843946-46845151:+|nuORF	ENST00000450704.1_1_9:46843946-46845151:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.8080444335938	2	526.809242	1051.60393	1.2418	0.00065418	-3.7046	-0.0019516	-2.4628	-0.0012974	526.8072201508533	100.99	2.1143	101.03	100.03	102.14	0.046349					121	49	4	0	0	0	0.9295	1	10860	10860		55.504	0.72789	1	2474600			2187	11892	1501	1503	2595	2595					0.08019397248085625
ARIWTRIH	8	Unmodified	_ARIWTRIH_					0	0	0		ENST00000450704.1_1_9:46843946-46845151:+|nuORF	ENST00000450704.1_1_9:46843946-46845151:+|nuORF	ENST00000450704.1_1_9:46843946-46845151:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.8084716796875	2	526.809242	1051.60393	0.8285	0.00043646	-2.9233	-0.00154	-2.0948	-0.0011036	526.8075886317766	100.77	1.8367	100.92	100.51	102.34	0.14352					113	44	4	0	0	0	0.36381	3	10538	10514;10538;10586		82.305	7.7884	1	2715400			2188	11892	1501	1503	2596;2597;2598	2597					0.08019397248085625
ARIWTRIH	8	Unmodified	_ARIWTRIH_					0	0	0		ENST00000450704.1_1_9:46843946-46845151:+|nuORF	ENST00000450704.1_1_9:46843946-46845151:+|nuORF	ENST00000450704.1_1_9:46843946-46845151:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.8084716796875	2	526.809242	1051.60393	-1.5277	-0.0008048	-0.73876	-0.00038919	-2.2664	-0.001194	526.8087430402255	100.83	1.7886	101	100.55	102.33	0.17199					107	43	4	0	0	0	0.47906	5	10470	10447;10470;10495;10507;10519		76.847	5.5509	1	3074100			2189	11892	1501	1503	2599;2600;2601;2602;2603	2600					0.08019397248085625
ARKAVRKRPNQ	11	Unmodified	_ARKAVRKRPNQ_					0	0	0		nc|ENSG00000110619|P49589-2|CARS1;nc|ENSG00000110619|P49589|CARS1;ENST00000531387.5_1_11:3022346-3069017:-|nuORF;ENSG00000110619|ENST00000380525|CARS1;ENST00000526890.5_1_11:3022346-3038536:-|nuORF	nc|ENSG00000110619|P49589-2|CARS1	nc|ENSG00000110619|P49589-2|CARS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.93939208984375	3	441.940855	1322.80073	-1.4755	-0.00065207	-0.86005	-0.00038009	-2.3355	-0.0010322	441.9403125343586	55.224	1.199	55.287	54.704	55.903	0.063725					106	39	3	0	0	0	0.74771	1	4664	4664		22.562	1.5294	1	485540			2190	2533	1502	1504	2604	2604					0.15224577071035128
ARKAVRKRPNQ	11	Unmodified	_ARKAVRKRPNQ_					0	0	0		nc|ENSG00000110619|P49589-2|CARS1;nc|ENSG00000110619|P49589|CARS1;ENST00000531387.5_1_11:3022346-3069017:-|nuORF;ENSG00000110619|ENST00000380525|CARS1;ENST00000526890.5_1_11:3022346-3038536:-|nuORF	nc|ENSG00000110619|P49589-2|CARS1	nc|ENSG00000110619|P49589-2|CARS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9400329589844	3	441.940855	1322.80073	0.33265	0.00014701	-2.7256	-0.0012046	-2.393	-0.0010575	441.9395069624772	55.282	1.2267	55.373	54.736	55.962	0.091167					101	37	4	0	0	0	0.75121	1	4659	4659		21.78	4.6137	1	451030			2191	2533	1502	1504	2605	2605					0.15224577071035128
ARKAVVLL	8	Unmodified	_ARKAVVLL_					0	0	0		nc|ENSG00000117899|Q14696-2|MESD;ENSG00000117899|ENST00000261758|MESD	nc|ENSG00000117899|Q14696-2|MESD	nc|ENSG00000117899|Q14696-2|MESD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3002014160156	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.80706	1	6696	6696		19.36	1.0356	1	1072400			2192	3005	1503	1505	2606	2606					0.14627262273359065
ARKAVVLL	8	Unmodified	_ARKAVVLL_					0	0	0		nc|ENSG00000117899|Q14696-2|MESD;ENSG00000117899|ENST00000261758|MESD	nc|ENSG00000117899|Q14696-2|MESD	nc|ENSG00000117899|Q14696-2|MESD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3000793457031	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81724	1	7210	7210		14.664	0.88877	1	1921500			2193	3005	1503	1505	2607	2607					0.14627262273359065
ARKAVVLL	8	Unmodified	_ARKAVVLL_					0	0	0		nc|ENSG00000117899|Q14696-2|MESD;ENSG00000117899|ENST00000261758|MESD	nc|ENSG00000117899|Q14696-2|MESD	nc|ENSG00000117899|Q14696-2|MESD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002624511719	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.81724	1	8297	8297		14.664	1.7049	1	5485100			2194	3005	1503	1505	2608	2608					0.14627262273359065
ARKAVVLL	8	Unmodified	_ARKAVVLL_					0	0	0		nc|ENSG00000117899|Q14696-2|MESD;ENSG00000117899|ENST00000261758|MESD	nc|ENSG00000117899|Q14696-2|MESD	nc|ENSG00000117899|Q14696-2|MESD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30029296875	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.80963	3	8197	8197;8353;8537		21.702	2.3424	1	6323600			2195	3005	1503	1505	2609;2610;2611	2609					0.14627262273359065
ARKEKKIKSK	10	Unmodified	_ARKEKKIKSK_					0	0	0		ENSG00000253797|ENST00000521776|UTP14C	ENSG00000253797|ENST00000521776|UTP14C	ENSG00000253797|ENST00000521776|UTP14C	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2960205078125	3	405.934706	1214.78229	-1.9303	-0.0007836	-2.4362	-0.00098893	-4.3665	-0.0017725	405.9336697648599	36.689	1.1703	36.689	36.137	37.307	0					50	26	2	0	0	0	0.37624	1	2219	2219		30.569	13.402	1	156880			2196	8868	1504	1506	2612	2612					0.18349022376423818
ARKFASIARN	10	Unmodified	_ARKFASIARN_					0	0	0		ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.329345703125	2	567.330539	1132.64652	1.497	0.00084932	-2.8559	-0.0016202	-1.3589	-0.00077092	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.86218	1	9744	9744		32.812	4.9302	1	15259000			2197	7340	1505	1507	2613	2613					0.0855074758567298
ARKFASIARN	10	Unmodified	_ARKFASIARN_					0	0	0		ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3296508789062	2	567.330539	1132.64652	0.79571	0.00045143	-2.2136	-0.0012558	-1.4178	-0.00080439	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.86587	1	9796	9796		29.17	2.1227	1	18145000			2198	7340	1505	1507	2614	2614					0.0855074758567298
ARKIGVLI	8	Unmodified	_ARKIGVLI_					0	0	0		nc|ENSG00000111799|Q99715-2|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1;ENSG00000111799|ENST00000322507|COL12A1	nc|ENSG00000111799|Q99715-2|COL12A1	nc|ENSG00000111799|Q99715-2|COL12A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.29986572265625	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81724	1	6833	6833		14.664	0	1	1921500			2199	2613	1506	1508	2615	2615					0.14627262273359065
ARKKAFPPP	9	Unmodified	_ARKKAFPPP_					0	0	0		ENSG00000158352|ENST00000376020|SHROOM4;nc|ENSG00000158352|Q9ULL8-2|SHROOM4	ENSG00000158352|ENST00000376020|SHROOM4	ENSG00000158352|ENST00000376020|SHROOM4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.30914306640625	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.471	1	44.413	43.913	44.913	-0.058262								0	0	0	0.27974	1	3135	3135		38.806	4.6336	1				2200	5473	1507	1509	2616	2616					0.0976576315931652
ARKKAQTAPPL	11	Unmodified	_ARKKAQTAPPL_					0	0	0		ENSG00000167476|ENST00000300961|JSRP1	ENSG00000167476|ENST00000300961|JSRP1	ENSG00000167476|ENST00000300961|JSRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8668823242188	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.60058	2	11573	11573;11585		44.377	8.7589	1	52150000			2201	6293	1508	1510	2617;2618	2617					0.12612473933995716
ARKKELVKID	10	Unmodified	_ARKKELVKID_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.5877380371094	3	400.587195	1198.73976	0.18537	7.4256E-05	0.41784	0.00016738	0.60321	0.00024164	400.5871088639427	16.252	0.32049	15.653	15.465	15.786	-0.59873					15	6	3	0	0	0	0.34329	1	112	112		68.846	7.0816	1	117070	+		2202	20437;29946;29947	1509	1511	2619	2619					0.14833627248231096
ARKKELVKID	10	Unmodified	_ARKKELVKID_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	400.587195	1198.73976	1.8013	0.00072159	-1.1968	-0.00047943	0.6045	0.00024216	400.58659535755095	16.247	0.39933	15.759	15.607	16.006	-0.48718	0.053145	-0.00076577	NaN	68.846	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	131560	+		2203	20437;29946;29947	1509	1511							0.14833627248231096
ARKKKKSA	8	Unmodified	_ARKKKKSA_					0	0	0			REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF	REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.78759765625	2	458.806168	915.597784	-1.7491	-0.00080249	-2.9271	-0.001343	-4.6762	-0.0021455	458.8048120284099	93.096	0.41459	93.289	93.147	93.562	0.19239					10	9	2	0	0	0	0.4196	1	9435	9435		13.775	0	1	61965	+		2204	20148	1510	1512	2620	2620					0.13660879016561012
ARKKNLSG	8	Unmodified	_ARKKNLSG_					0	0	0		nc|ENSG00000185513|Q9Y468-3|L3MBTL1;nc|ENSG00000185513|Q9Y468-2|L3MBTL1;nc|ENSG00000185513|Q9Y468-4|L3MBTL1;nc|ENSG00000185513|Q9Y468-1|L3MBTL1;nc|ENSG00000185513|Q9Y468|L3MBTL1;ENSG00000185513|ENST00000418998|L3MBTL1	nc|ENSG00000185513|Q9Y468-3|L3MBTL1	nc|ENSG00000185513|Q9Y468-3|L3MBTL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.265869140625	2	437.266876	872.519199	1.7622	0.00077054	-4.3406	-0.001898	-2.5785	-0.0011275	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.84341	1	1040	1040		24.203	1.1603	1	1079000			2205	7720	1511	1513	2621	2621					0.07784026711476599
ARKLGPKP	8	Unmodified	_ARKLGPKP_					0	0	0			REV__ENST00000455528.5_1_21:34941370-34944872:+|nuORF	REV__ENST00000455528.5_1_21:34941370-34944872:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77978515625	2	433.782162	865.549771	-0.79116	-0.00034319	-1.3768	-0.00059725	-2.168	-0.00094044	433.7815212812287	49.412	1.5016	49.388	48.794	50.296	-0.024033					70	33	3	0	0	0	0.4196	1	4159	4159		8.2313	4.2461	1	3762600	+		2206	26942	1512	1514	2622	2622					0.11161805096503485
ARKLGPKP	8	Unmodified	_ARKLGPKP_					0	0	0			REV__ENST00000455528.5_1_21:34941370-34944872:+|nuORF	REV__ENST00000455528.5_1_21:34941370-34944872:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77923583984375	2	433.782162	865.549771	-0.51515	-0.00022346	-1.6535	-0.00071724	-2.1686	-0.00094071	433.78142852026133	55.383	1.0525	55.355	54.83	55.883	-0.027279					42	28	2	0	0	0	0.4196	1	5025	5025		18.324	4.5491	1	118990	+		2207	26942	1512	1514	2623	2623					0.11161805096503485
ARKLGPKP	8	Unmodified	_ARKLGPKP_					0	0	0			REV__ENST00000455528.5_1_21:34941370-34944872:+|nuORF	REV__ENST00000455528.5_1_21:34941370-34944872:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.2228088378906	2	433.782162	865.549771	0.59356	0.00025748	1.4585	0.00063269	2.0521	0.00089016	433.78106939168435	61.765	0.12308	61.794	61.738	61.861	0.029575					8	5	2	0	0	0	0.4196	1	5758	5758		16.473	12.789	1	80797	+		2208	26942	1512	1514	2624	2624					0.11161805096503485
ARKLGPKP	8	Unmodified	_ARKLGPKP_					0	0	0			REV__ENST00000455528.5_1_21:34941370-34944872:+|nuORF	REV__ENST00000455528.5_1_21:34941370-34944872:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77996826171875	2	433.782162	865.549771	0.28843	0.00012512	-3.8544	-0.001672	-3.566	-0.0015469	433.78110763255734	50.946	4.0891	50.995	50.343	54.432	0.049896					422	122	5	0	0	0	0.86288	1	4356	4356		26.796	6.3143	1	4871400	+		2209	26942	1512	1514	2625	2625					0.11161805096503485
ARKLILIQALH	11	Unmodified	_ARKLILIQALH_					0	0	0			REV__ENST00000373344.9_1_X:76938343-76938427:-|nuORF	REV__ENST00000373344.9_1_X:76938343-76938427:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.2945861816406	3	425.946835	1274.81868	-1.7331	-0.00073819	-3.6902	-0.0015718	-5.4233	-0.00231	426.28089757201394	73.828	0.11311	73.955	73.908	74.021	0.12711					6	4	2	0	0	0	0.1747	1	6805	6805		41.08	16.848	1	54585	+		2210	25758	1513	1515	2626	2626					0.1922589927316949
ARKLWIQEGP	10	Unmodified	_ARKLWIQEGP_					0	0	0		ENSG00000182902|ENST00000327451|SLC25A18	ENSG00000182902|ENST00000327451|SLC25A18	ENSG00000182902|ENST00000327451|SLC25A18	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3821411132812	2	599.340572	1196.66659	-1.1821	-0.00070849	0.02682	1.6074E-05	-1.1553	-0.00069241	599.3405662194507	42.318	0.31746	42.736	42.509	42.826	0.41746					12	7	2	0	0	0	0.37624	1	3755	3755		40.778	16.259	1	185110			2211	7481	1514	1516	2627	2627					0.07612498525600131
ARKSHLTG	8	Unmodified	_ARKSHLTG_					0	0	0		nc|ENSG00000204179|Q4JDL3-5|PTPN20;nc|ENSG00000204179|Q4JDL3-6|PTPN20;nc|ENSG00000204179|Q4JDL3-11|PTPN20;nc|ENSG00000204179|Q4JDL3-4|PTPN20;nc|ENSG00000204179|Q4JDL3-3|PTPN20;nc|ENSG00000204179|Q4JDL3-2|PTPN20;ENSG00000204179|ENST00000374339|PTPN20	nc|ENSG00000204179|Q4JDL3-5|PTPN20	nc|ENSG00000204179|Q4JDL3-5|PTPN20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2518005371094	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.89962	1	9106	9106		38.806	5.2906	1	2235800			2212	8421	1515	1517	2628	2628					0.04839453677379879
ARKSQIPAS	9	Unmodified	_ARKSQIPAS_					0	0	0		ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2774963378906	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.78536	1	7996	7996		29.15	3.5755	1	4644500			2213	9157	1516	1518	2629	2629					0.060319920203255606
ARKSQIPAS	9	Unmodified	_ARKSQIPAS_					0	0	0		ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2774658203125	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.78983	1	8002	8002		27.882	3.6795	1	1929800			2214	9157	1516	1518	2630	2630					0.060319920203255606
ARKSQIPAS	9	Unmodified	_ARKSQIPAS_					0	0	0		ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2774658203125	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.76255	1	8234	8234		35.618	6.4687	1	2070000			2215	9157	1516	1518	2631	2631					0.060319920203255606
ARKSQIPAS	9	Unmodified	_ARKSQIPAS_					0	0	0		ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2782897949219	2	479.277441	956.540328	2.2671	0.0010866	-1.7134	-0.0008212	0.55373	0.00026539	479.2765493533754	97.406	1.666	97.351	96.889	98.555	-0.055542					99	38	4	0	0	0	0.76764	1	10532	10532		34.173	8.5985	1	975730			2216	9157	1516	1518	2632	2632					0.060319920203255606
ARKSQIPAS	9	Unmodified	_ARKSQIPAS_					0	0	0		ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2762756347656	2	479.277441	956.540328	2.817	0.0013501	-2.8251	-0.001354	-0.0081471	-3.9047E-06	479.2759456818491	112.87	1.6654	112.84	112.19	113.85	-0.024811					57	42	2	0	0	0	0.78983	1	12456	12456		27.882	3.6795	1	640150			2217	9157	1516	1518	2633	2633					0.060319920203255606
ARKSQIPAS	9	Unmodified	_ARKSQIPAS_					0	0	0		ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2772216796875	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.48102	1	8226	8226		52.937	17.736	1	2046100			2218	9157	1516	1518	2634	2634					0.060319920203255606
ARKSQIPAS	9	Unmodified	_ARKSQIPAS_					0	0	0		ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	ENST00000218516.3_1_X:100658806-100662812:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2773742675781	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.76764	2	8103	8103;8638		34.173	7.4796	1	6593200			2219	9157	1516	1518	2635;2636	2635					0.060319920203255606
ARKVKLRKVK	10	Unmodified	_ARKVKLRKVK_					0	0	0			REV__ENSG00000183246|ENST00000433039|RIMBP3C	REV__ENSG00000183246|ENST00000433039|RIMBP3C	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	409.2923889160156	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.897	1	71.934	71.434	72.434	0.037148								0	0	0	0.45132	1	6826	6826		6.3209	1.9821	1		+		2220	22587	1517	1519	2637	2637					0.2472131174695278
ARKYVRNISA	10	Unmodified	_ARKYVRNISA_					0	0	0		ENST00000496153.5_1_7:73097949-73108381:+|nuORF	ENST00000496153.5_1_7:73097949-73108381:+|nuORF	ENST00000496153.5_1_7:73097949-73108381:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3439331054688	2	589.343646	1176.67274	0.66189	0.00039008	-1.7255	-0.0010169	-1.0636	-0.00062683	589.3425006699924	91.235	1.3572	91.685	90.611	91.968	0.44958					101	32	4	0	0	0	0.85981	1	10767	10767		35.152	3.6222	1	1778100			2221	12778	1518	1520	2638	2638					0.09147016757151505
ARLAGILSSAS	11	Unmodified	_ARLAGILSSAS_					0	0	0			REV__ENST00000321599.8_2_3:49764036-49764180:-|nuORF	REV__ENST00000321599.8_2_3:49764036-49764180:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3060913085938	2	523.303655	1044.59276	-0.83282	-0.00043582	0.63031	0.00032984	-0.2025	-0.00010597	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.7144	1	8123	8123		29.17	0.91578	1	2778600	+		2222	25016	1519	1521	2639	2639					0.07224530363282611
ARLAITSSLAS	11	Unmodified	_ARLAITSSLAS_					0	0	0		ENST00000425441.5_1_3:46963417-46963543:-|nuORF	ENST00000425441.5_1_3:46963417-46963543:-|nuORF	ENST00000425441.5_1_3:46963417-46963543:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.320556640625	2	545.316763	1088.61897	-1.4651	-0.00079892	1.2838	0.00070007	-0.18127	-9.8847E-05	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.72106	1	8515	8515		28.081	3.5623	1	4998200			2223	11534	1520	1522	2640	2640					0.07820799534761136
ARLAQGLATG	10	Unmodified	_ARLAQGLATG_					0	0	0			REV__nc|ENSG00000100842|O43281-3|EFS	REV__nc|ENSG00000100842|O43281-3|EFS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2776794433594	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.82886	1	7728	7728		37.812	8.6415	1	2142700	+		2224	29740	1521	1523	2641	2641					0.060319920203255606
ARLARRLRPLL	11	Unmodified	_ARLARRLRPLL_					0	0	0		ENSG00000205116|ENST00000378821|TMEM88B	ENSG00000205116|ENST00000378821|TMEM88B	ENSG00000205116|ENST00000378821|TMEM88B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.6359558105469	3	445.633362	1333.87826	1.3928	0.00062067	4.2688	0.0019023	5.6616	0.002523	445.6352024508616	36.513	1.0806	36.953	36.745	37.825	0.44043					121	25	6	0	0	0	0.79224	2	2881	2881;2941		12.957	2.8536	1	12493000			2225	8512	1522	1524	2642;2643	2642					0.2246721500721378
ARLCPKKI	8	Unmodified	_ARLCPKKI_					0	0	0		ENST00000530523.1_1_8:42580956-42581139:-|nuORF	ENST00000530523.1_1_8:42580956-42581139:-|nuORF	ENST00000530523.1_1_8:42580956-42581139:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7986755371094	2	464.791672	927.568792	-1.6424	-0.00076336	-0.52072	-0.00024202	-2.1631	-0.0010054	464.79130074195194	36.947	2.0594	36.958	35.753	37.812	0.011173					99	45	3	0	0	0	0.84634	1	2414	2414		60.294	7.9948	1	317960			2226	13347	1523	1525	2644	2644					0.10211018395921201
ARLEAAAELS	10	Unmodified	_ARLEAAAELS_					0	0	0			REV__ENST00000461041.1_1_9:15423144-15433670:+|nuORF	REV__ENST00000461041.1_1_9:15423144-15433670:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.4566650390625	2	515.780013	1029.54547	1.3495	0.00069605	-2.4356	-0.0012562	-1.0861	-0.00056019	516.2802345911751	36.678	0.24685	37.145	37.059	37.306	0.46702					7	5	2	0	0	0	0.37624	1	2903	2903		33.922	3.6039	1	37200	+		2227	21135	1524	1526	2645	2645					0.03188251092274186
ARLEKLTVHCT	11	Unmodified	_ARLEKLTVHCT_					0	0	0			REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8929443359375	2	635.850447	1269.68634	1.5119	0.00096137	1.6331	0.0010384	3.145	0.0019998	635.8508031401294	105.76	0.15621	105.92	105.81	105.96	0.15924					5	3	2	0	0	0	0.16822	1	11286	11286		36.447	7.2972	1	26702	+		2228	18928	1525	1527	2646	2646					0.062285064740535745
ARLGCLVALH	10	Unmodified	_ARLGCLVALH_					0	0	0			REV__ENST00000417954.5_1_21:46945848-46950845:-|nuORF	REV__ENST00000417954.5_1_21:46945848-46950845:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8074340820312	2	526.805311	1051.59607	4.93	0.0025972	-0.16074	-8.4677E-05	4.7693	0.0025125	526.8050513194519	107.7	0.2365	107.82	107.65	107.88	0.11716					12	6	3	0	0	0	0.84112	1	13169	13169		37.159	1.5408	1	365150	+		2229	26451	1526	1528	2647	2647					0.07233501936298126
ARLGQGCP	8	Unmodified	_ARLGQGCP_					0	0	0		ENST00000313431.13_2_1:144931535-144931775:-|nuORF	ENST00000313431.13_2_1:144931535-144931775:-|nuORF	ENST00000313431.13_2_1:144931535-144931775:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2436218261719	2	401.20543	800.396307	2.0745	0.00083231	-3.7452	-0.0015026	-1.6707	-0.00067028	401.2038713246101	21.655	0.25624	21.212	21.069	21.326	-0.44324					7	5	2	0	0	0	0.4196	1	794	794		20.482	1.1219	1	21730			2230	9953	1527	1529	2648	2648					-0.011875530114593857
ARLGRARAI	9	Unmodified	_ARLGRARAI_					0	0	0		ENSG00000139370|ENST00000266771|SLC15A4	ENSG00000139370|ENST00000266771|SLC15A4	ENSG00000139370|ENST00000266771|SLC15A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.3170166015625	2	492.314692	982.614831	-0.59598	-0.00029341	2.9167	0.0014359	2.3207	0.0011425	492.3159808682073	48.009	0.56541	48.932	48.622	49.187	0.92315					30	13	3	0	0	0	0.76255	1	4625	4625		35.618	2.8059	1	734030			2231	4367	1528	1530	2649	2649					0.12282799622346374
ARLHLKKKKN	10	Unmodified	_ARLHLKKKKN_					0	0	0		ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76678466796875	3	412.606813	1234.79861	2.3514	0.00097021	-0.52442	-0.00021638	1.827	0.00075383	412.60660874759475	48.323	0.94818	48.321	47.93	48.878	-0.002449					30	22	2	0	0	0	0.37624	1	4079	4079		10.587	1.375	1	104090			2232	14442	1529	1531	2650	2650					0.19060148333232974
ARLHLKKKKN	10	Unmodified	_ARLHLKKKKN_					0	0	0		ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	412.606813	1234.79861	0.25701	0.00010605	2.1959	0.00090603	2.4529	0.0010121	412.6080063810125	47.89	0.13146	47.928	47.828	47.96	0.037731	-0.19631	0.0025942	NaN	10.587	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91013			2233	14442	1529	1531							0.19060148333232974
ARLHLLCLL	9	Unmodified	_ARLHLLCLL_					0	0	0		ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.7942504882812	2	526.325879	1050.63721	-0.037655	-1.9819E-05	-2.141	-0.0011269	-2.1786	-0.0011467	526.3246477672391	58.947	2.3385	58.934	57.813	60.152	-0.013729					134	71	2	0	0	0	0.20789	1	5424	5424		15.642	0	1	114610			2234	8876	1530	1532	2651	2651					0.11391262975757854
ARLKARGG	8	Unmodified	_ARLKARGG_					0	0	0		ENST00000308020.5_1_11:490627-491155:+|nuORF	ENST00000308020.5_1_11:490627-491155:+|nuORF	ENST00000308020.5_1_11:490627-491155:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	414.7617492675781	2	414.761761	827.508969	1.1509	0.00047736	-1.3485	-0.00055931	-0.19758	-8.1948E-05	414.76116269619223	88.453	2.5747	88.379	87.811	90.386	-0.074005					210	60	5	0	0	0	0.86791	1	9374	9374		28.254	6.5519	1	17562000			2235	9881	1531	1533	2652	2652					0.08831463776903092
ARLKLGLV	8	Unmodified	_ARLKLGLV_					0	0	0		ENSG00000171811|ENST00000368586|CFAP46	ENSG00000171811|ENST00000368586|CFAP46	ENSG00000171811|ENST00000368586|CFAP46	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2997131347656	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81548	1	7316	7316		20.482	0	1	1921500			2236	6713	1532	1534	2653	2653					0.14627262273370434
ARLKSRKFTG	10	Unmodified	_ARLKSRKFTG_					0	0	0			REV__ENSG00000173327|ENST00000309100|MAP3K11	REV__ENSG00000173327|ENST00000309100|MAP3K11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3536987304688	2	582.354014	1162.69348	-1.3468	-0.00078429	0.41376	0.00024096	-0.93299	-0.00054333	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.86272	1	11327	11327		24.519	0.31644	1	120000000	+		2237	21915	1533	1535	2654	2654					0.11863607136797327
ARLLEATP	8	Unmodified	_ARLLEATP_					0	0	0		nc|ENSG00000142733|O95382-3|MAP3K6;ENSG00000142733|ENST00000357582|MAP3K6	nc|ENSG00000142733|O95382-3|MAP3K6	nc|ENSG00000142733|O95382-3|MAP3K6	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.7546081542969	2	435.75581	869.497067	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.808	1	75.941	75.441	76.441	0.13325								0	0	0	0.29498	1	7069	7069		26.796	2.5934	1				2238	4582	1534	1536	2655	2655					0.05709802243052309
ARLLFFLF	8	Unmodified	_ARLLFFLF_					0	0	0			REV__ENST00000373825.6_1_6:35800833-35800920:-|nuORF	REV__ENST00000373825.6_1_6:35800833-35800920:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8082885742188	2	513.810388	1025.60622	-0.38547	-0.00019806	-2.1955	-0.001128	-2.5809	-0.0013261	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.86791	1	3936	3936		28.254	0	1	1377600	+		2239	25772	1535	1537	2656	2656					0.0944443293317363
ARLLKPLWL	9	Unmodified	_ARLLKPLWL_					0	0	0			REV__ENST00000555228.5_1_14:74318578-74325566:+|nuORF	REV__ENST00000555228.5_1_14:74318578-74325566:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.8168334960938	2	555.363319	1108.71209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.184	1	47.203	46.703	47.703	0.018967								0	0	0	0.33676	1	3514	3514		18.324	1.8513	1		+		2240	28678	1536	1538	2657	2657					0.16207768778645004
ARLLLSGLPG	10	Unmodified	_ARLLLSGLPG_					0	0	0			REV__ENST00000606448.1_1_13:103047077-103047416:+|nuORF	REV__ENST00000606448.1_1_13:103047077-103047416:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.8132629394531	2	498.813659	995.612765	-0.29906	-0.00014917	-0.21923	-0.00010935	-0.51828	-0.00025853	498.8134282165123	76.279	0.67809	76.679	76.367	77.045	0.39969					25	16	2	0	0	0	0.77314	1	8658	8658		40.778	5.1599	1	316160	+		2241	29370	1537	1539	2658	2658					0.11478326093902069
ARLLLSGLPG	10	Unmodified	_ARLLLSGLPG_					0	0	0			REV__ENST00000606448.1_1_13:103047077-103047416:+|nuORF	REV__ENST00000606448.1_1_13:103047077-103047416:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	498.813659	995.612765	-0.29906	-0.00014917	-0.21923	-0.00010935	-0.51828	-0.00025853	498.8134282165123	76.279	0.67809	76.679	76.367	77.045	0.39969	-0.038166	6.1475E-05	NaN	40.778	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	316160	+		2242	29370	1537	1539							0.11478326093902069
ARLLLSGLPG	10	Unmodified	_ARLLLSGLPG_					0	0	0			REV__ENST00000606448.1_1_13:103047077-103047416:+|nuORF	REV__ENST00000606448.1_1_13:103047077-103047416:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	498.813659	995.612765	-0.10162	-5.0691E-05	-0.36141	-0.00018027	-0.46303	-0.00023097	498.81327147047574	76.187	0.64577	76.755	76.392	77.038	0.56835	0.038166	-8.0367E-05	NaN	40.778	27	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224370	+		2243	29370	1537	1539							0.11478326093902069
ARLLQSYIH	9	Unmodified	_ARLLQSYIH_					0	0	0			REV__nc|ENSG00000107938|Q3B7T1-5|EDRF1	REV__nc|ENSG00000107938|Q3B7T1-5|EDRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.813720703125	2	550.81419	1099.61383	-0.002921	-1.6089E-06	-3.573	-0.001968	-3.5759	-0.0019697	550.8119720585922	26.519	0.44167	26.565	26.301	26.743	0.045507					18	12	2	0	0	0	0.76764	1	1128	1128		34.173	0.25091	1	38797	+		2244	17683	1538	1540	2659	2659					0.06800540462791105
ARLLQSYIH	9	Unmodified	_ARLLQSYIH_					0	0	0			REV__nc|ENSG00000107938|Q3B7T1-5|EDRF1	REV__nc|ENSG00000107938|Q3B7T1-5|EDRF1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	550.81419	1099.61383	-0.002921	-1.6089E-06	-3.573	-0.001968	-3.5759	-0.0019697	550.8119720585922	26.519	0.44167	26.565	26.301	26.743	0.045507	0	0	NaN	34.173	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38797	+		2245	17683	1538	1540							0.06800540462791105
ARLLRLSYR	9	Unmodified	_ARLLRLSYR_					0	0	0			REV__ENST00000451029.5_1_7:89905415-89916830:+|nuORF	REV__ENST00000451029.5_1_7:89905415-89916830:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3565063476562	2	574.356557	1146.69856	2.697	0.001549	-3.8251	-0.002197	-1.1282	-0.00064797	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.7932	1	10870	10870		24.519	0.31644	1	738540	+		2246	17570	1539	1541	2660	2660					0.13107910999406158
ARLNLRKNY	9	Unmodified	_ARLNLRKNY_					0	0	0		ENSG00000121871|ENST00000475390|SLITRK3;chr3:165190851-165196592|21|16.81|0.87|4.27|-|ENST00000241274|SLITRK3,SLITRK3	ENSG00000121871|ENST00000475390|SLITRK3	ENSG00000121871|ENST00000475390|SLITRK3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3570556640625	2	574.338364	1146.66217	-1.373	-0.00078858	-0.59208	-0.00034006	-1.9651	-0.0011286	574.3379251429561	99.639	0.21107	99.825	99.687	99.898	0.18582					6	4	2	0	0	0	0.20789	1	10313	10313		11.511	0	1	32378			2247	394	1540	1542	2661	2661					0.0947103410269392
ARLPRRRQR	9	Unmodified	_ARLPRRRQR_					0	0	0			REV__ENST00000568394.1_1_16:1030490-1030955:-|nuORF	REV__ENST00000568394.1_1_16:1030490-1030955:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5896911621094	3	403.590156	1207.74864	0.45649	0.00018424	-0.098781	-3.9867E-05	0.35771	0.00014437	403.5899247221592	16.197	0.22531	16.173	16.046	16.271	-0.024035					19	9	3	0	0	0	0.7932	1	127	127		24.519	0	1	183800	+		2248	28898	1541	1543	2662	2662					0.1530745844793273
ARLQHTSA	8	Unmodified	_ARLQHTSA_					0	0	0			REV__ENST00000547694.2_1_12:110390821-110397718:-|nuORF	REV__ENST00000547694.2_1_12:110390821-110397718:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2406921386719	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.89043	1	7952	7952		35.618	2.1027	1	1068200	+		2249	28558	1542	1544	2663	2663					0.021228632977113193
ARLQHTSA	8	Unmodified	_ARLQHTSA_					0	0	0			REV__ENST00000547694.2_1_12:110390821-110397718:-|nuORF	REV__ENST00000547694.2_1_12:110390821-110397718:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.24102783203125	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.88601	1	8302	8302		34.173	3.6689	1	1238700	+		2250	28558	1542	1544	2664	2664					0.021228632977113193
ARLQHTSA	8	Unmodified	_ARLQHTSA_					0	0	0			REV__ENST00000547694.2_1_12:110390821-110397718:-|nuORF	REV__ENST00000547694.2_1_12:110390821-110397718:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2406921386719	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.90089	1	7746	7746		39.253	2.0937	1	1094000	+		2251	28558	1542	1544	2665	2665					0.021228632977113193
ARLQQIPNIVN	11	Unmodified	_ARLQQIPNIVN_					0	0	0			REV__nc|ENSG00000153237|Q8NFR7-3|CCDC148	REV__nc|ENSG00000153237|Q8NFR7-3|CCDC148	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5816345214844	3	422.582333	1264.72517	-1.8745	-0.00079214	1.022	0.00043188	-0.85252	-0.00036026	422.58264285495795	97.6	3.2584	97.802	96.488	99.746	0.20206					167	75	4	0	0	0	0.77061	1	10090	10090		15.921	4.9225	1	303430	+		2252	20340	1543	1545	2666	2666					0.1033955510006308
ARLRGRMPVPL	11	Unmodified	_ARLRGRMPVPL_					0	0	0			REV__ENST00000377996.5_1_9:35846336-35847153:+|nuORF	REV__ENST00000377996.5_1_9:35846336-35847153:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.8929443359375	2	633.384791	1264.75503	-0.76688	-0.00048573	1.6752	0.001061	0.90827	0.00057528	633.3857297307702	51.44	1.7579	51.44	50.814	52.572	0					77	46	2	0	0	0	0.73621	1	4133	4133		5.9211	0	1	76099	+		2253	25882	1544	1546	2667	2667					0.13324215564443875
ARLRQLWHIL	10	Unmodified	_ARLRQLWHIL_					0	0	0			REV__ENST00000334166.8_1_2:150325168-150325279:+|nuORF	REV__ENST00000334166.8_1_2:150325168-150325279:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.7095031738281	3	435.934929	1304.78296	0.48126	0.0002098	-0.081267	-3.5427E-05	0.4	0.00017437	435.9348328149334	30.989	0.43412	30.993	30.753	31.187	0.0037212					13	9	2	0	0	0	0.37624	1	2086	2086		16.717	7.9181	1	91378	+		2254	25152	1545	1547	2668	2668					0.14275861816190627
ARLRRSLATPA	11	Unmodified	_ARLRRSLATPA_					0	0	0			REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5824890136719	3	404.582556	1210.72584	2.5442	0.0010293	-2.1363	-0.00086432	0.40789	0.00016503	404.5815915077912	30.915	0.71748	30.904	30.626	31.344	-0.010656					46	17	3	0	0	0	0.7342	1	1671	1671		28.577	9.3141	1	137840	+		2255	16706	1546	1548	2669	2669					0.12890394539795125
ARLSPPAPPL	10	Unmodified	_ARLSPPAPPL_					0	0	0		ENSG00000185950|ENST00000375856|IRS2	ENSG00000185950|ENST00000375856|IRS2	ENSG00000185950|ENST00000375856|IRS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8038635253906	2	509.805834	1017.59712	-0.93407	-0.00047619	-3.0736	-0.0015669	-4.0077	-0.0020431	509.8042014095356	84.682	2.4835	84.682	83.134	85.618	0					128	59	3	0	0	0	0.82886	1	7943	7943		37.812	3.639	1	609880			2256	7761	1547	1549	2670	2670					0.08902039576844345
ARLSRIDI	8	Unmodified	_ARLSRIDI_					0	0	0		ENSG00000006704|ENST00000424337|GTF2IRD1;nc|ENSG00000006704|Q9UHL9|GTF2IRD1;nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1	ENSG00000006704|ENST00000424337|GTF2IRD1	ENSG00000006704|ENST00000424337|GTF2IRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2875061035156	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.87479	1	11608	11608		30.504	2.2494	1	24731000			2257	709	1548	1550	2671	2671					0.08748582400005489
ARLSRPQR	8	Unmodified	_ARLSRPQR_					0	0	0		nc|ENSG00000167702|Q96AC6|KIFC2	nc|ENSG00000167702|Q96AC6|KIFC2	nc|ENSG00000167702|Q96AC6|KIFC2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.29339599609375	2	492.296499	982.578445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.52	1	65.525	65.025	66.025	0.0046997								0	0	0	0.29245	1	6166	6166		30.504	0	1				2258	15076	1549	1551	2672	2672					0.08645922725656874
ARLTSTGLTF	10	Unmodified	_ARLTSTGLTF_					0	0	0		ENSG00000176165|ENST00000313071|FOXG1	ENSG00000176165|ENST00000313071|FOXG1	ENSG00000176165|ENST00000313071|FOXG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.7991943359375	2	533.798206	1065.58186	-0.53486	-0.00028551	0.4856	0.00025921	-0.049257	-2.6293E-05	533.7982996473613	38.841	1.1106	38.794	38.465	39.576	-0.047001					58	25	3	0	0	0	0.8608	1	2802	2802		34.173	3.6689	1	583460			2259	7059	1550	1552	2673	2673					0.05169127988983746
ARLTVLEELLP	11	Unmodified	_ARLTVLEELLP_					0	0	0			REV__ENSG00000161652|ENST00000293405|IZUMO2	REV__ENSG00000161652|ENST00000293405|IZUMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3843383789062	2	627.37682	1252.73909	6.5832	0.0041301	2.6289	0.0016493	9.2121	0.0057794	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.72228	2	13789	13755;13789		27.882	6.6961	1	94412	+		2260	20774	1551	1553	2674;2675	2675					0.12282787808521789
ARLTVLEELLP	11	Unmodified	_ARLTVLEELLP_					0	0	0			REV__ENSG00000161652|ENST00000293405|IZUMO2	REV__ENSG00000161652|ENST00000293405|IZUMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3860473632812	2	627.37682	1252.73909	6.5843	0.0041309	2.7627	0.0017332	9.347	0.0058641	627.3785206095984	117.88	0.78392	117.8	117.55	118.33	-0.077652					52	36	2	0	0	0	0.72918	2	14070	14054;14070		26.693	8.4308	1	44020	+		2261	20774	1551	1553	2676;2677	2677					0.12282787808521789
ARLWALSPV	9	Unmodified	_ARLWALSPV_					0	0	0			REV__ENST00000360001.10_1_1:1164082-1164292:-|nuORF	REV__ENST00000360001.10_1_1:1164082-1164292:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8009033203125	2	506.800552	1011.58655	-1.5362	-0.00077856	2.1529	0.0010911	0.61671	0.00031255	506.8015777288388	44.442	2.8102	44.442	42.605	45.415	0					120	68	3	0	0	0	0.78983	1	3235	3235		27.882	1.0861	1	386210	+		2262	25468	1552	1554	2678	2678					0.08122056922422871
ARNGLLLL	8	Unmodified	_ARNGLLLL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25152587890625	2	435.281995	868.549437	-0.36604	-0.00015933	-1.1323	-0.00049286	-1.4983	-0.00065219	435.28123639385683	80.194	1.2661	80.611	79.997	81.263	0.41621					51	29	3	0	0	0	0.4196	1	9122	9122		26.796	0	1	215270			2263	2675	1553	1555	2679	2679					0.10990385376669565
ARNPAFQPQTL	11	Unmodified	_ARNPAFQPQTL_					0	0	0		nc|ENSG00000165792|Q9H7H0-2|METTL17;ENSG00000165792|ENST00000339374|METTL17;nc|ENSG00000165792|Q9H7H0-3|METTL17;ENST00000553441.5_1_14:21458218-21461351:+|nuORF;ENST00000555902.6_1_14:21458708-21463066:+|nuORF	nc|ENSG00000165792|Q9H7H0-2|METTL17	nc|ENSG00000165792|Q9H7H0-2|METTL17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.832275390625	2	621.833111	1241.65167	-0.059885	-3.7238E-05	-0.48468	-0.00030139	-0.54457	-0.00033863	621.8326229533526	64.162	0.85619	64.549	64.178	65.034	0.3868					35	19	2	0	0	0	0.50531	1	6922	6922		51.528	0.33506	1	377770			2264	6122	1554	1556	2680	2680					0.0405100665759619
ARNTAAPATV	10	Unmodified	_ARNTAAPATV_					0	0	0		ENSG00000185737|ENST00000372141|NRG3;nc|ENSG00000185737|P56975-2|NRG3;nc|ENSG00000185737|P56975|NRG3	ENSG00000185737|ENST00000372141|NRG3	ENSG00000185737|ENST00000372141|NRG3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.26678466796875	2	486.267073	970.519593	-1.0662	-0.00051845	1.1715	0.00056965	0.10528	5.1192E-05	486.2675130911451	84.089	3.5556	84.089	81.847	85.402	0					191	86	3	0	0	0	0.86218	1	7852	7852		32.812	4.9302	1	458040			2265	7739	1555	1557	2681	2681					0.03315401640645632
ARNTGLIH	8	Unmodified	_ARNTGLIH_					0	0	0			REV__ENST00000338372.6_1_19:54567073-54567187:-|nuORF	REV__ENST00000338372.6_1_19:54567073-54567187:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.24951171875	2	441.251226	880.487899	0.32417	0.00014304	-2.7866	-0.0012296	-2.4624	-0.0010865	441.24991412668464	48.695	0.51625	49.599	49.33	49.846	0.90424					32	12	4	0	0	0	0.92973	1	4738	4738		50.025	0.81375	1	839260	+		2266	25219	1556	1558	2682	2682					0.04287453677386566
ARNVVLATGT	10	Unmodified	_ARNVVLATGT_					0	0	0		ENSG00000140961|ENST00000393306|OSGIN1	ENSG00000140961|ENST00000393306|OSGIN1	ENSG00000140961|ENST00000393306|OSGIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29058837890625	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.64457	1	8943	8943		47.657	11.211	1	9565500			2267	4469	1557	1559	2683	2683					0.06628261191815454
ARPAAGALH	9	Unmodified	_ARPAAGALH_					0	0	0			REV__ENST00000400147.6_1_18:3498882-3499149:-|nuORF	REV__ENST00000400147.6_1_18:3498882-3499149:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.24652099609375	2	432.245944	862.477334	-1.0325	-0.00044629	3.2826	0.0014189	2.2501	0.00097258	432.2475175582521	98.287	1.1701	98.287	97.806	98.976	0					69	28	4	0	0	0	0.67235	1	9881	9881		42.474	5.446	1	659880	+		2268	26244	1558	1560	2684	2684					0.04059471022924299
ARPAAGALH	9	Unmodified	_ARPAAGALH_					0	0	0			REV__ENST00000400147.6_1_18:3498882-3499149:-|nuORF	REV__ENST00000400147.6_1_18:3498882-3499149:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.2460632324219	2	432.245944	862.477334	2.2492	0.0009722	0.66992	0.00028957	2.9191	0.0012618	432.24608940248754	98.153	1.1777	98.098	97.645	98.823	-0.054825					59	26	3	0	0	0	0.77546	2	10574	10574;10596		31.955	4.5032	1	400370	+		2269	26244	1558	1560	2685;2686	2685					0.04059471022924299
ARPAAGALH	9	Unmodified	_ARPAAGALH_					0	0	0			REV__ENST00000400147.6_1_18:3498882-3499149:-|nuORF	REV__ENST00000400147.6_1_18:3498882-3499149:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.24700927734375	2	432.245944	862.477334	-1.5831	-0.0006843	4.1398	0.0017894	2.5567	0.0011051	432.2477437889501	97.848	1.4004	98.075	97.569	98.969	0.22788					76	31	5	0	0	0	0.7932	1	10158	10158		25.45	3.7478	1	626180	+		2270	26244	1558	1560	2687	2687					0.04059471022924299
ARPAAGALH	9	Unmodified	_ARPAAGALH_					0	0	0			REV__ENST00000400147.6_1_18:3498882-3499149:-|nuORF	REV__ENST00000400147.6_1_18:3498882-3499149:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.2451477050781	2	432.245944	862.477334	0.71048	0.0003071	1.7126	0.00074026	2.4231	0.0010474	432.2467662501791	97.978	1.1971	98.139	97.71	98.908	0.16073					69	26	4	0	0	0	0.69914	2	10211	10148;10211		40.573	12.318	1	628050	+		2271	26244	1558	1560	2688;2689	2689					0.04059471022924299
ARPAGRSR	8	Unmodified	_ARPAGRSR_					0	0	0		ENST00000521657.5_1_5:67511644-67522118:+|nuORF	ENST00000521657.5_1_5:67511644-67522118:+|nuORF	ENST00000521657.5_1_5:67511644-67522118:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25189208984375	2	435.754467	869.494381	-1.4407	-0.00062781	-2.2653	-0.0009871	-3.706	-0.0016149	435.7535444567358	77.07	1.7034	77.162	76.19	77.893	0.091438					113	77	2	0	0	0	0.4196	1	7146	7146		12.207	0	1	299970			2272	13174	1559	1561	2690	2690					0.05441391628744441
ARPARGSR	8	Unmodified	_ARPARGSR_					0	0	0		chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.29901123046875	2	435.754467	869.494381	-1.3459	-0.00058648	-2.1496	-0.00093671	-3.4955	-0.0015232	435.753593974604	77.012	0.95712	77.012	76.126	77.084	0					66	39	2	0	0	0	0.4196	1	6949	6949		10.866	3.6722	1	117850			2273	39	1560	1562	2691	2691					0.054413916287558095
ARPARGSR	8	Unmodified	_ARPARGSR_					0	0	0		chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002014160156	2	435.754467	869.494381	-0.50804	-0.00022138	1.8694	0.00081459	1.3613	0.00059321	435.7552607532758	74.711	0.86363	75.102	74.706	75.57	0.3911					43	20	4	0	0	0	0.4196	1	8392	8392		53.351	0	1	510140			2274	39	1560	1562	2692	2692					0.054413916287558095
ARPARGSR	8	Unmodified	_ARPARGSR_					0	0	0		chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3002014160156	2	435.754467	869.494381	0.25474	0.00011101	1.0303	0.00044895	1.285	0.00055996	435.7549601556188	74.567	0.94218	75.126	74.717	75.659	0.55891					49	22	4	0	0	0	0.4196	1	8439	8439		20.947	0	1	515610			2275	39	1560	1562	2693	2693					0.054413916287558095
ARPARGSR	8	Unmodified	_ARPARGSR_					0	0	0		chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	chr1:211830330-211830573|56|26.71|0.84|4.99|-|2|LPGAT1,LPGAT1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3002014160156	2	435.754467	869.494381	0.14032	6.1144E-05	1.9496	0.00084953	2.0899	0.00091067	435.7551679153033	70.964	0.81493	71.511	71.049	71.864	0.54756					30	19	2	0	0	0	0.4196	1	7873	7873		27.882	4.8398	1	132310			2276	39	1560	1562	2694	2694					0.054413916287558095
ARPEARVVRP	10	Unmodified	_ARPEARVVRP_					0	0	0			REV__nc|ENSG00000182648|Q8NI28|RNF32-DT	REV__nc|ENSG00000182648|Q8NI28|RNF32-DT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8428344726562	2	575.843813	1149.67307	0.78302	0.0004509	-2.2721	-0.0013084	-1.4891	-0.0008575	575.8423757005949	90.383	2.7025	90.537	88.725	91.427	0.15388					214	64	4	0	0	0	0.86272	1	9009	9009		24.519	1.4767	1	2399100	+		2277	30080	1561	1563	2695	2695					0.10422436476960684
ARPGLFRFV	9	Unmodified	_ARPGLFRFV_					0	0	0			REV__ENST00000316292.13_1_6:74229958-74230393:-|nuORF	REV__ENST00000316292.13_1_6:74229958-74230393:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8168334960938	2	531.813993	1061.61343	1.0705	0.00056928	4.463	0.0023735	5.5334	0.0029427	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.78536	1	10526	10526		29.15	2.3535	1	4490200	+		2278	24952	1562	1564	2696	2696					0.08509165533587293
ARPGLKLL	8	Unmodified	_ARPGLKLL_					0	0	0		chr10:73074915-73077721|44|23.75|0.95|4.65|-|2|TE_info:AluJo,AluJo_dup44225,Alu,SINE,donor,+,73077721,73078015|P4HA1,None|4	chr10:73074915-73077721|44|23.75|0.95|4.65|-|2|TE_info:AluJo,AluJo_dup44225,Alu,SINE,donor,+,73077721,73078015|P4HA1,None|4	chr10:73074915-73077721|44|23.75|0.95|4.65|-|2|TE_info:AluJo,AluJo_dup44225,Alu,SINE,donor,+,73077721,73078015|P4HA1,None|4	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2524108886719	2	434.292362	866.570172	-1.3222	-0.00057421	3.2983	0.0014324	1.9762	0.00085823	434.29302825048035	78.334	0.73957	78.334	78.083	78.823	0					56	26	3	0	0	0	0.4196	1	7219	7219		24.203	15.971	1	83884			2279	84	1563	1565	2697	2697					0.13154975756322074
ARPGPGRRRR	10	Unmodified	_ARPGPGRRRR_					0	0	0		ENST00000592217.2_1_19:46271832-46273041:+|nuORF	ENST00000592217.2_1_19:46271832-46273041:+|nuORF	ENST00000592217.2_1_19:46271832-46273041:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3427124023438	2	589.858121	1177.70169	-0.62736	-0.00037005	1.6214	0.0009564	0.99405	0.00058635	590.360394491733	92.366	0.17254	92.828	92.701	92.874	0.46249					5	3	2	0	0	0	0.37624	1	11019	11019		19.104	0	1	29866			2280	14286	1564	1566	2698	2698					0.11994598896785647
ARPIFFTP	8	Unmodified	_ARPIFFTP_					0	0	0		nc|ENSG00000066933|B2RTY4-5|MYO9A;nc|ENSG00000066933|B2RTY4-2|MYO9A;ENSG00000066933|ENST00000356056|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A;ENST00000563542.5_1_15:72185266-72338904:-|nuORF;ENST00000568781.1_1_15:72185941-72190124:-|nuORF	nc|ENSG00000066933|B2RTY4-5|MYO9A	nc|ENSG00000066933|B2RTY4-5|MYO9A	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.77203369140625	2	474.76872	947.522887	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.843	1	27.82	27.32	28.32	-0.023556								0	0	0	0.29452	1	1295	1295		33.516	6.7195	1				2281	1172	1565	1567	2699	2699					0.04702696485310298
ARPIWLLTG	9	Unmodified	_ARPIWLLTG_					0	0	0			REV__nc|ENSG00000196141|Q9NUQ6-3|SPATS2L	REV__nc|ENSG00000196141|Q9NUQ6-3|SPATS2L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8074340820312	2	513.808377	1025.6022	-1.3396	-0.00068828	2.9957	0.0015392	1.6561	0.00085093	513.8097904108414	55.315	1.3714	55.315	54.869	56.24	0					65	40	2	0	0	0	0.7932	1	4680	4680		25.574	0	1	101120	+		2282	30122	1566	1568	2700	2700					0.0904234343945518
ARPLLHLL	8	Unmodified	_ARPLLHLL_					0	0	0		ENST00000532554.5_1_11:45935680-45939362:-|nuORF;ENSG00000121680|ENST00000378750|PEX16;nc|ENSG00000121680|Q9Y5Y5-2|PEX16	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.8058776855469	2	466.805637	931.596721	-1.9392	-0.00090521	3.4764	0.0016228	1.5372	0.00071757	466.8071062107657	31.294	1.1887	31.294	30.953	32.141	0					86	41	3	0	0	0	0.80706	1	1497	1497		19.36	4.6959	1	152630			2283	13381	1567	1569	2701	2701					0.12818664647659261
ARPLLHLL	8	Unmodified	_ARPLLHLL_					0	0	0		ENST00000532554.5_1_11:45935680-45939362:-|nuORF;ENSG00000121680|ENST00000378750|PEX16;nc|ENSG00000121680|Q9Y5Y5-2|PEX16	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	466.805637	931.596721	0.16497	7.7009E-05	1.4372	0.00067089	1.6022	0.0007479	466.80616642977617	31.211	1.1526	31.23	30.902	32.055	0.01836	-0.040057	-0.00061842	NaN	19.36	47	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77482			2284	13381	1567	1569							0.12818664647659261
ARPLLHLL	8	Unmodified	_ARPLLHLL_					0	0	0		ENST00000532554.5_1_11:45935680-45939362:-|nuORF;ENSG00000121680|ENST00000378750|PEX16;nc|ENSG00000121680|Q9Y5Y5-2|PEX16	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	466.805637	931.596721	-0.25933	-0.00012106	1.8679	0.00087195	1.6086	0.00075089	466.80631326130225	31.324	1.1632	31.272	30.944	32.108	-0.051033	0.0028603	-0.00021628	NaN	19.36	55	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77668			2285	13381	1567	1569							0.12818664647659261
ARPLLHLL	8	Unmodified	_ARPLLHLL_					0	0	0		ENST00000532554.5_1_11:45935680-45939362:-|nuORF;ENSG00000121680|ENST00000378750|PEX16;nc|ENSG00000121680|Q9Y5Y5-2|PEX16	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	466.805637	931.596721	-0.42331	-0.0001976	1.7714	0.00082692	1.3481	0.00062932	466.80638372377126	31.219	1.3209	31.208	30.668	31.989	-0.010656	-0.061406	-0.00030634	NaN	19.36	63	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69250			2286	13381	1567	1569							0.12818664647659261
ARPLLHLL	8	Unmodified	_ARPLLHLL_					0	0	0		ENST00000532554.5_1_11:45935680-45939362:-|nuORF;ENSG00000121680|ENST00000378750|PEX16;nc|ENSG00000121680|Q9Y5Y5-2|PEX16	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	466.805637	931.596721	-1.1174	-0.00052162	2.5895	0.0012088	1.4721	0.00068719	466.80683086923796	31.168	0.58613	31.228	30.944	31.531	0.059631	-0.041902	0.00045743	NaN	19.36	47	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110700			2287	13381	1567	1569							0.12818664647659261
ARPLLHLL	8	Unmodified	_ARPLLHLL_					0	0	0		ENST00000532554.5_1_11:45935680-45939362:-|nuORF;ENSG00000121680|ENST00000378750|PEX16;nc|ENSG00000121680|Q9Y5Y5-2|PEX16	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	466.805637	931.596721	0.28589	0.00013346	0.66247	0.00030924	0.94836	0.0004427	466.8061243307883	31.546	0.35457	31.529	31.305	31.66	-0.017466	0.25916	-0.0013417	NaN	19.36	23	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58158			2288	13381	1567	1569							0.12818664647659261
ARPLLPHFA	9	Unmodified	_ARPLLPHFA_					0	0	0			REV__ENST00000394426.5_1_12:53604612-53604810:-|nuORF	REV__ENST00000394426.5_1_12:53604612-53604810:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.3025207519531	2	511.300719	1020.58688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.109	1	35.109	34.609	35.609	0								0	0	0	0.2969	1	1936	1936		31.955	2.8053	1		+		2289	26079	1568	1570	2702	2702					0.07741476642263478
ARPLPLPPGG	10	Unmodified	_ARPLPLPPGG_					0	0	0		ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.78997802734375	2	487.792727	973.5709	-0.48923	-0.00023864	-3.7823	-0.001845	-4.2716	-0.0020836	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.84112	1	9903	9903		37.159	3.6435	1	1599600			2290	10687	1569	1571	2703	2703					0.08305770405377189
ARPLPLPPGG	10	Unmodified	_ARPLPLPPGG_					0	0	0		ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.791015625	2	487.792727	973.5709	-0.24073	-0.00011743	-3.9662	-0.0019347	-4.2069	-0.0020521	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.84112	1	9984	9984		37.159	0.13063	1	1981400			2291	10687	1569	1571	2704	2704					0.08305770405377189
ARPLPPPG	8	Unmodified	_ARPLPPPG_					0	0	0		ENST00000447878.6_1_12:110034697-110034970:+|nuORF	ENST00000447878.6_1_12:110034697-110034970:+|nuORF	ENST00000447878.6_1_12:110034697-110034970:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.7386779785156	2	402.739963	803.465373	-1.9023	-0.00076612	-0.36046	-0.00014517	-2.2627	-0.00091129	402.73969487917356	40.397	0.80037	40.404	40.114	40.914	0.0065041					72	28	4	0	0	0	0.86791	1	2548	2548		28.254	6.5519	1	562560			2292	11852	1570	1572	2705	2705					0.05577854279749772
ARPLQLPGP	9	Unmodified	_ARPLQLPGP_					0	0	0		ENST00000512737.5_1_17:49243812-49244306:+|nuORF	ENST00000512737.5_1_17:49243812-49244306:+|nuORF	ENST00000512737.5_1_17:49243812-49244306:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	474.7860107421875	2	474.784902	947.55525	0.4921	0.00023364	-1.3828	-0.00065655	-0.89073	-0.00042291	474.7841747430564	26.75	0.38884	26.791	26.607	26.996	0.040834					17	11	2	0	0	0	0.7932	1	1168	1168		24.203	2.2429	1	28806			2293	13041	1571	1573	2706	2706					0.07937483888326824
ARPLQLPLLLI	11	Unmodified	_ARPLQLPLLLI_					0	0	0			REV__nc|ENSG00000174791|Q13671-2|RIN1	REV__nc|ENSG00000174791|Q13671-2|RIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.9171142578125	2	623.915916	1245.81728	1.3365	0.00083387	-0.15632	-9.7533E-05	1.1802	0.00073634	623.9155943953253	109.95	0.81959	110.08	109.65	110.46	0.12289					62	32	3	0	0	0	0.78986	1	11842	11842		13.454	2.5885	1	2359700	+		2294	22014	1572	1574	2707	2707					0.2042026518442981
ARPQGGQDI	9	Unmodified	_ARPQGGQDI_					0	0	0		nc|ENSG00000175792|Q9Y265-2|RUVBL1;ENSG00000175792|ENST00000322623|RUVBL1	nc|ENSG00000175792|Q9Y265-2|RUVBL1	nc|ENSG00000175792|Q9Y265-2|RUVBL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.24267578125	2	471.243598	940.472643	0.94832	0.00044689	-0.73063	-0.0003443	0.21769	0.00010258	471.243171462268	85.882	3.6525	85.808	84.627	88.28	-0.073761					151	84	2	0	0	0	0.77244	1	8846	8846		32.812	3.6629	1	287660			2295	7035	1573	1575	2708	2708					2.5420895212846517E-05
ARPRLLLRRLA	11	Unmodified	_ARPRLLLRRLA_					0	0	0			REV__ENSG00000204839|ENST00000398882|MROH6	REV__ENSG00000204839|ENST00000398882|MROH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.6360168457031	3	445.633362	1333.87826	1.3928	0.00062067	4.2688	0.0019023	5.6616	0.002523	445.6352024508616	36.513	1.0806	36.953	36.745	37.825	0.44043					121	25	6	0	0	0	0.81219	1	2953	2953		8.7993	0	1	12493000	+		2296	23521	1574	1576	2709	2709					0.22467215007236518
ARPRLLRLRL	10	Unmodified	_ARPRLLRLRL_					0	0	0			REV__ENST00000270357.9_2_2:241508179-241513275:+|nuORF	REV__ENST00000270357.9_2_2:241508179-241513275:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	632.4336547851562	2	632.427848	1262.84114	-0.16111	-0.00010189	3.5728	0.0022595	3.4117	0.0021577	632.4298123182796	108.36	0.78529	108.31	108.01	108.8	-0.042404					66	29	3	0	0	0	0.85251	1	11835	11835		19.997	5.1319	1	4385300	+		2297	24530	1575	1577	2710	2710					0.2202354346145512
ARPSHLHLPM	10	Unmodified	_ARPSHLHLPM_					0	0	0		ENSG00000184675|ENST00000374869|AMER1	ENSG00000184675|ENST00000374869|AMER1	ENSG00000184675|ENST00000374869|AMER1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	579.8444213867188	2	579.813667	1157.61278	-0.30661	-0.00017778	0.958	0.00055546	0.65139	0.00037769	579.8134896097921	102.54	0.5044	102.54	102.28	102.79	0					21	12	2	0	0	0	0.37624	1	10447	10447		24.519	0	1	89311			2298	7637	1576	1578	2711	2711					0.040280028222241526
ARPTKVKAEPP	11	Unmodified	_ARPTKVKAEPP_					0	0	0		ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12	ENSG00000126464|ENST00000418929|PRR12	ENSG00000126464|ENST00000418929|PRR12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.85595703125	2	597.35368	1192.69281	2.4166	0.0014436	0.49195	0.00029387	2.9086	0.0017374	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.68532	1	10090	10090		33.922	1.1711	1	8047600			2299	3455	1577	1579	2712	2712					0.10416767697074647
ARPTLLTT	8	Unmodified	_ARPTLLTT_					0	0	0		ENST00000480654.5_1_22:31686494-31686635:-|nuORF	ENST00000480654.5_1_22:31686494-31686635:-|nuORF	ENST00000480654.5_1_22:31686494-31686635:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26556396484375	2	436.763635	871.512717	1.7626	0.00076985	-0.96852	-0.00042301	0.79409	0.00034683	436.7629205376576	26.512	1.1482	26.479	25.815	26.963	-0.032125					62	27	3	0	0	0	0.85277	1	1090	1090		25.45	1.2474	1	159520			2300	12445	1578	1580	2713	2713					0.07182088760066563
ARPVAPPLVSN	11	Unmodified	_ARPVAPPLVSN_					0	0	0		ENST00000219069.5_1_16:3333246-3333393:+|nuORF	ENST00000219069.5_1_16:3333246-3333393:+|nuORF	ENST00000219069.5_1_16:3333246-3333393:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.8250122070312	2	560.827298	1119.64004	0.41234	0.00023125	-2.2425	-0.0012576	-1.8301	-0.0010264	560.825892688675	50.894	0.58826	50.944	50.645	51.233	0.0499					49	18	3	0	0	0	0.73893	1	4005	4005		24.519	0.31644	1	1036600			2301	9158	1579	1581	2714	2714					0.08500809634256257
ARPVVKRPE	9	Unmodified	_ARPVVKRPE_					0	0	0			REV__ENST00000597578.1_1_16:86524111-86542471:-|nuORF	REV__ENST00000597578.1_1_16:86524111-86542471:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3262329101562	2	526.322183	1050.62981	0.37769	0.00019879	4.4657	0.0023504	4.8434	0.0025492	526.3243897315671	50.946	0.73737	50.996	50.541	51.279	0.049896					35	23	2	0	0	0	0.20789	1	4044	4044		10.866	0	1	115060	+		2302	29269	1580	1582	2715	2715					0.10652246699692114
ARQKGIFYLTL	11	Unmodified	_ARQKGIFYLTL_					0	0	0		ENSG00000188706|ENST00000357166|ZDHHC9	ENSG00000188706|ENST00000357166|ZDHHC9	ENSG00000188706|ENST00000357166|ZDHHC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2562561035156	3	437.259079	1308.75541	-1.4866	-0.00065002	-2.4798	-0.0010843	-3.9663	-0.0017343	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.71803	1	10416	10416		28.577	1.827	1	981430			2303	7949	1581	1583	2716	2716					0.11337913765282792
ARQQPLGDLVL	11	Unmodified	_ARQQPLGDLVL_					0	0	0		ENST00000268483.7_1_16:72127358-72127508:-|nuORF	ENST00000268483.7_1_16:72127358-72127508:-|nuORF	ENST00000268483.7_1_16:72127358-72127508:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.1738891601562	2	605.351137	1208.68772	1.012	0.00061263	1.5696	0.00095016	2.5816	0.0015628	605.3523162695612	54.501	0.54497	54.908	54.573	55.118	0.40663					16	12	2	0	0	0	0.17432	1	5508	5508		17.468	0	1	195530			2304	9539	1582	1584	2717	2717					0.09172463834443079
ARQSLALGK	9	Unmodified	_ARQSLALGK_					0	0	0			REV__ENSG00000178917|ENST00000436261|ZNF852	REV__ENSG00000178917|ENST00000436261|ZNF852	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.287841796875	2	472.287808	942.561064	-0.90688	-0.00042831	0.99653	0.00047065	0.08965	4.2341E-05	472.288236121891	103.17	0.98251	103.35	103.08	104.07	0.18298					53	24	3	0	0	0	0.7932	1	10996	10996		26.693	2.4902	1	568190	+		2305	22300	1583	1585	2718	2718					0.08748582399982752
ARQSLALGK	9	Unmodified	_ARQSLALGK_					0	0	0			REV__ENSG00000178917|ENST00000436261|ZNF852	REV__ENSG00000178917|ENST00000436261|ZNF852	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	472.287808	942.561064	-0.8634	-0.00040777	1.1381	0.00053752	0.27472	0.00012975	472.28836334210547	103.74	1.056	103.74	103.34	104.39	0	0.23104	0.0010656	NaN	26.693	42	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	174830	+		2306	22300	1583	1585							0.08748582399982752
ARQSLALGK	9	Unmodified	_ARQSLALGK_					0	0	0			REV__ENSG00000178917|ENST00000436261|ZNF852	REV__ENSG00000178917|ENST00000436261|ZNF852	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	472.287808	942.561064	-0.10761	-5.0821E-05	0.31759	0.00014999	0.20998	9.9172E-05	472.28789729485084	103.57	1.0249	103.57	103.26	104.29	-0.0035706	0.05674	0.00029057	NaN	26.693	48	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	382810	+		2307	22300	1583	1585							0.08748582399982752
ARQSLALGK	9	Unmodified	_ARQSLALGK_					0	0	0			REV__ENSG00000178917|ENST00000436261|ZNF852	REV__ENSG00000178917|ENST00000436261|ZNF852	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	472.287808	942.561064	2.8021	0.0013234	-2.7393	-0.0012937	0.062775	2.9648E-05	472.28644984937114	103.52	0.97939	103.48	103.16	104.14	-0.043755	-0.031894	-0.0025969	NaN	26.693	45	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	345270	+		2308	22300	1583	1585							0.08748582399982752
ARQSLALGK	9	Unmodified	_ARQSLALGK_					0	0	0			REV__ENSG00000178917|ENST00000436261|ZNF852	REV__ENSG00000178917|ENST00000436261|ZNF852	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	472.287808	942.561064	-0.021412	-1.0113E-05	0.21243	0.00010033	0.19102	9.0216E-05	472.28785620400754	103.4	1.0621	103.44	103.07	104.13	0.041489	-0.067604	0.00019124	NaN	26.693	46	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	376850	+		2309	22300	1583	1585							0.08748582399982752
ARQSLALGK	9	Unmodified	_ARQSLALGK_					0	0	0			REV__ENSG00000178917|ENST00000436261|ZNF852	REV__ENSG00000178917|ENST00000436261|ZNF852	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	472.287808	942.561064	-0.90688	-0.00042831	0.99653	0.00047065	0.08965	4.2341E-05	472.288236121891	103.17	0.98251	103.35	103.08	104.07	0.18298	-0.15887	0.00093188	NaN	26.693	53	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	568190	+		2310	22300	1583	1585							0.08748582399982752
ARQSLALGK	9	Unmodified	_ARQSLALGK_					0	0	0			REV__ENSG00000178917|ENST00000436261|ZNF852	REV__ENSG00000178917|ENST00000436261|ZNF852	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	472.287808	942.561064	0.77569	0.00036635	-0.63395	-0.00029941	0.14174	6.6944E-05	472.2874576904681	103.4	0.90387	103.52	103.17	104.08	0.12622	0.011019	-0.00060823	NaN	26.693	49	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	543010	+		2311	22300	1583	1585							0.08748582399982752
ARQSLALGK	9	Unmodified	_ARQSLALGK_					0	0	0			REV__ENSG00000178917|ENST00000436261|ZNF852	REV__ENSG00000178917|ENST00000436261|ZNF852	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	472.287808	942.561064	-1.7052	-0.00080535	1.8888	0.00089205	0.18358	8.6701E-05	472.2885866874759	103.36	0.89517	103.47	103.19	104.08	0.11494	-0.040429	0.0017747	NaN	26.693	42	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	389150	+		2312	22300	1583	1585							0.08748582399982752
ARRADPGP	8	Unmodified	_ARRADPGP_					0	0	0			REV__ENST00000294428.7_1_1:65210812-65211007:+|nuORF	REV__ENST00000294428.7_1_1:65210812-65211007:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.22735595703125	2	420.227751	838.440949	0.042435	1.7832E-05	0.092754	3.8978E-05	0.13519	5.681E-05	420.2277069932212	78.969	5.8282	79.518	76.332	82.16	0.54945					273	145	3	0	0	0	0.93293	1	9199	9199		51.335	5.3835	1	581780	+		2313	24692	1584	1586	2719	2719					0.015265941262214255
ARRAEAGPGQ	10	Unmodified	_ARRAEAGPGQ_					0	0	0		ENST00000215906.5_1_22:26839168-26839342:+|nuORF	ENST00000215906.5_1_22:26839168-26839342:+|nuORF	ENST00000215906.5_1_22:26839168-26839342:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.25244140625	2	506.767771	1011.52099	1.4623	0.00074106	-2.4769	-0.0012552	-1.0146	-0.00051415	507.2675646617252	49.626	0.68858	50.471	49.952	50.641	0.845					27	16	3	0	0	0	0.37624	1	4808	4808		23.523	12.657	1	229830			2314	9120	1585	1587	2720	2720					0.015690357294261048
ARRAGPDP	8	Unmodified	_ARRAGPDP_					0	0	0			REV__ENST00000533050.5_2_11:126081479-126104922:+|nuORF	REV__ENST00000533050.5_2_11:126081479-126104922:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2273254394531	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.90465	1	7200	7200		40.573	5.3719	1	419890	+		2315	28336	1586	1588	2721	2721					0.015265941262214255
ARRAGPDP	8	Unmodified	_ARRAGPDP_					0	0	0			REV__ENST00000533050.5_2_11:126081479-126104922:+|nuORF	REV__ENST00000533050.5_2_11:126081479-126104922:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2274475097656	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.89962	1	7615	7615		38.806	1.647	1	743780	+		2316	28336	1586	1588	2722	2722					0.015265941262214255
ARRAGPDP	8	Unmodified	_ARRAGPDP_					0	0	0			REV__ENST00000533050.5_2_11:126081479-126104922:+|nuORF	REV__ENST00000533050.5_2_11:126081479-126104922:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2272644042969	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.87922	1	7660	7660		31.955	4.0726	1	961790	+		2317	28336	1586	1588	2723	2723					0.015265941262214255
ARRAGPDP	8	Unmodified	_ARRAGPDP_					0	0	0			REV__ENST00000533050.5_2_11:126081479-126104922:+|nuORF	REV__ENST00000533050.5_2_11:126081479-126104922:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.22796630859375	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.89494	1	7690	7690		37.159	5.2042	1	831720	+		2318	28336	1586	1588	2724	2724					0.015265941262214255
ARRAHWIF	8	Unmodified	_ARRAHWIF_					0	0	0		ENSG00000160505|ENST00000301295|NLRP4;nc|ENSG00000160505|Q96MN2-2|NLRP4;nc|ENSG00000160505|Q96MN2-3|NLRP4	ENSG00000160505|ENST00000301295|NLRP4	ENSG00000160505|ENST00000301295|NLRP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.3062744140625	2	528.796135	1055.57772	0.5028	0.00026588	1.1802	0.0006241	1.683	0.00088998	528.7968220846096	51.684	0.46585	52.119	51.906	52.372	0.43505					17	10	2	0	0	0	0.4196	1	5161	5161		26.796	0	1	172620			2319	5591	1587	1589	2725	2725					0.05215128076588371
ARRAIAPN	8	Unmodified	_ARRAIAPN_					0	0	0		ENSG00000278803|ENST00000458091|PWWP4	ENSG00000278803|ENST00000458091|PWWP4	ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7604675292969	2	434.759218	867.503883	1.0426	0.00045328	-1.4353	-0.00062401	-0.39271	-0.00017073	434.7588689622068	87.637	3.2918	87.563	86.012	89.304	-0.073997					167	77	4	0	0	0	0.884	1	9146	9146		33.516	0	1	1572200			2320	9035	1588	1590	2726	2726					0.0648315991426216
ARRAIAPN	8	Unmodified	_ARRAIAPN_					0	0	0		ENSG00000278803|ENST00000458091|PWWP4	ENSG00000278803|ENST00000458091|PWWP4	ENSG00000278803|ENST00000458091|PWWP4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7802429199219	2	434.759218	867.503883	0.13901	6.0436E-05	0.2956	0.00012851	0.43461	0.00018895	434.76081726702967	34.569	0.062599	34.677	34.639	34.701	0.10829					4	2	2	0	0	0	0.4196	1	1760	1760		31.955	7.7521	1	18095			2321	9035	1588	1590	2727	2727					0.0648315991426216
ARRAPGTP	8	Unmodified	_ARRAPGTP_					0	0	0		ENST00000378827.4_1_20:6748503-6748725:+|nuORF	ENST00000378827.4_1_20:6748503-6748725:+|nuORF	ENST00000378827.4_1_20:6748503-6748725:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2380065917969	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.884	1	7640	7640		33.516	0	1	1747900			2322	10877	1589	1591	2728	2728					0.04243184505889985
ARRDAGPP	8	Unmodified	_ARRDAGPP_					0	0	0		nc|ENSG00000106003|Q8NES3-3|LFNG;ENSG00000106003|ENST00000222725|LFNG	nc|ENSG00000106003|Q8NES3-3|LFNG	nc|ENSG00000106003|Q8NES3-3|LFNG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22760009765625	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.89962	1	7522	7522		38.806	4.6336	1	678130			2323	2272	1590	1592	2729	2729					0.015265941262214255
ARREGPGP	8	Unmodified	_ARREGPGP_					0	0	0		ENST00000549412.5_2_12:49760692-49761130:+|nuORF	ENST00000549412.5_2_12:49760692-49761130:+|nuORF	ENST00000549412.5_2_12:49760692-49761130:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.22747802734375	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.90465	1	7605	7605		40.573	4.9543	1	743780			2324	13636	1591	1593	2730	2730					0.015265941262327942
ARREGPGP	8	Unmodified	_ARREGPGP_					0	0	0		ENST00000549412.5_2_12:49760692-49761130:+|nuORF	ENST00000549412.5_2_12:49760692-49761130:+|nuORF	ENST00000549412.5_2_12:49760692-49761130:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2275390625	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.88915	1	7721	7721		35.201	1.6851	1	961790			2325	13636	1591	1593	2731	2731					0.015265941262327942
ARREKAGKG	9	Unmodified	_ARREKAGKG_					0	0	0			REV__ENST00000483034.1_1_2:12857046-12857593:+|nuORF	REV__ENST00000483034.1_1_2:12857046-12857593:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.2810363769531	2	486.788507	971.562461	-0.2098	-0.00010213	3.0684	0.0014937	2.8586	0.0013915	486.7896839680831	49.504	0.57267	49.964	49.623	50.196	0.45983					29	13	3	0	0	0	0.20789	1	4778	4778		31.955	11.473	1	611100	+		2326	24074	1592	1594	2732	2732					0.07554216488756538
ARRGHVPRR	9	Unmodified	_ARRGHVPRR_					0	0	0		ENST00000356518.6_1_20:3654099-3654460:-|nuORF	ENST00000356518.6_1_20:3654099-3654460:-|nuORF	ENST00000356518.6_1_20:3654099-3654460:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8341064453125	2	552.834114	1103.65368	-0.71064	-0.00039287	0.84717	0.00046834	0.13653	7.5479E-05	552.8343973070275	84.083	2.0319	84.083	83.586	85.618	0					122	47	3	0	0	0	0.74721	1	8024	8024		37.159	1.5408	1	300740			2327	10369	1593	1595	2733	2733					0.10599524976714747
ARRGSRKGSA	10	Unmodified	_ARRGSRKGSA_					0	0	0			REV__ENST00000335565.4_2_X:144899448-144902015:+|nuORF	REV__ENST00000335565.4_2_X:144899448-144902015:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3035888671875	2	523.302313	1044.59007	0.71899	0.00037625	1.6069	0.00084091	2.3259	0.0012172	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.8608	1	8810	8810		34.173	2.6427	1	13442000	+		2328	25170	1594	1596	2734	2734					0.0695611974899748
ARRILAGLG	9	Unmodified	_ARRILAGLG_					0	0	0		nc|ENSG00000204574|Q8NE71-2|ABCF1;ENSG00000204574|ENST00000326195|ABCF1	nc|ENSG00000204574|Q8NE71-2|ABCF1	nc|ENSG00000204574|Q8NE71-2|ABCF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8000183105469	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.7932	1	3307	3307		25.45	1.2474	1	1570500			2329	8461	1595	1597	2735	2735					0.11636592499530707
ARRIRGERA	9	Unmodified	_ARRIRGERA_					0	0	0		ENSG00000168148|ENST00000366696|H3-4;ENSG00000203852|ENST00000403683|H3C15;ENSG00000278828|ENST00000685041|H3C10;ENSG00000277775|ENST00000618052|H3C7;ENSG00000275714|ENST00000613854|H3C1;ENSG00000275379|ENST00000616365|H3C11;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;ENSG00000197153|ENST00000359303|H3C12;ENSG00000183598|ENST00000331491|H3C13;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000132475|ENST00000254810|H3-3B;ENSG00000203811|ENST00000369158|H3C14;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197409|ENST00000356476|H3C4	ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.8255615234375	2	542.825955	1083.63736	0.015829	8.5924E-06	0.35992	0.00019537	0.37575	0.00020397	542.8258091839693	16.682	0.3931	16.071	15.912	16.305	-0.6107					19	8	3	0	0	0	0.25483	1	166	166		68.787	17.451	1	390380			2330	6377	1596	1598	2736	2736					0.09888399019996541
ARRIRGERA	9	Unmodified	_ARRIRGERA_					0	0	0		ENSG00000168148|ENST00000366696|H3-4;ENSG00000203852|ENST00000403683|H3C15;ENSG00000278828|ENST00000685041|H3C10;ENSG00000277775|ENST00000618052|H3C7;ENSG00000275714|ENST00000613854|H3C1;ENSG00000275379|ENST00000616365|H3C11;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;ENSG00000197153|ENST00000359303|H3C12;ENSG00000183598|ENST00000331491|H3C13;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000132475|ENST00000254810|H3-3B;ENSG00000203811|ENST00000369158|H3C14;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197409|ENST00000356476|H3C4	ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	542.825955	1083.63736	-1.6948	-0.00091998	1.6708	0.00090696	-0.023982	-1.3018E-05	542.8273486878869	16.33	0.14809	16.33	16.227	16.375	0	0.078557	0.0018265	NaN	68.787	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31437			2331	6377	1596	1598							0.09888399019996541
ARRIRGERA	9	Unmodified	_ARRIRGERA_					0	0	0		ENSG00000168148|ENST00000366696|H3-4;ENSG00000203852|ENST00000403683|H3C15;ENSG00000278828|ENST00000685041|H3C10;ENSG00000277775|ENST00000618052|H3C7;ENSG00000275714|ENST00000613854|H3C1;ENSG00000275379|ENST00000616365|H3C11;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;ENSG00000197153|ENST00000359303|H3C12;ENSG00000183598|ENST00000331491|H3C13;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000132475|ENST00000254810|H3-3B;ENSG00000203811|ENST00000369158|H3C14;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197409|ENST00000356476|H3C4	ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	542.825955	1083.63736	0.82903	0.00045002	-1.5015	-0.00081508	-0.67252	-0.00036506	542.8257489587461	16.177	0.22546	16.255	16.158	16.383	0.077959	0.0032296	-0.0016176	NaN	68.787	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48941			2332	6377	1596	1598							0.09888399019996541
ARRIRGERA	9	Unmodified	_ARRIRGERA_					0	0	0		ENSG00000168148|ENST00000366696|H3-4;ENSG00000203852|ENST00000403683|H3C15;ENSG00000278828|ENST00000685041|H3C10;ENSG00000277775|ENST00000618052|H3C7;ENSG00000275714|ENST00000613854|H3C1;ENSG00000275379|ENST00000616365|H3C11;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;ENSG00000197153|ENST00000359303|H3C12;ENSG00000183598|ENST00000331491|H3C13;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000132475|ENST00000254810|H3-3B;ENSG00000203811|ENST00000369158|H3C14;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197409|ENST00000356476|H3C4	ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	542.825955	1083.63736	0.49681	0.00026968	-0.32542	-0.00017665	0.1714	9.3038E-05	542.8259159441658	16.423	0.18896	16.343	16.216	16.405	-0.080017	0.091464	-0.00034076	NaN	68.787	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71429			2333	6377	1596	1598							0.09888399019996541
ARRIRGERA	9	Unmodified	_ARRIRGERA_					0	0	0		ENSG00000168148|ENST00000366696|H3-4;ENSG00000203852|ENST00000403683|H3C15;ENSG00000278828|ENST00000685041|H3C10;ENSG00000277775|ENST00000618052|H3C7;ENSG00000275714|ENST00000613854|H3C1;ENSG00000275379|ENST00000616365|H3C11;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;ENSG00000197153|ENST00000359303|H3C12;ENSG00000183598|ENST00000331491|H3C13;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000132475|ENST00000254810|H3-3B;ENSG00000203811|ENST00000369158|H3C14;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197409|ENST00000356476|H3C4	ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	542.825955	1083.63736	1.0288	0.00055848	-1.5587	-0.00084609	-0.52984	-0.00028761	542.8254046836117	16.395	0.17424	16.311	16.194	16.368	-0.083363	0.059512	-0.0016796	NaN	68.787	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36113			2334	6377	1596	1598							0.09888399019996541
ARRIRGERA	9	Unmodified	_ARRIRGERA_					0	0	0		ENSG00000168148|ENST00000366696|H3-4;ENSG00000203852|ENST00000403683|H3C15;ENSG00000278828|ENST00000685041|H3C10;ENSG00000277775|ENST00000618052|H3C7;ENSG00000275714|ENST00000613854|H3C1;ENSG00000275379|ENST00000616365|H3C11;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;ENSG00000197153|ENST00000359303|H3C12;ENSG00000183598|ENST00000331491|H3C13;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000132475|ENST00000254810|H3-3B;ENSG00000203811|ENST00000369158|H3C14;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197409|ENST00000356476|H3C4	ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	542.825955	1083.63736	0.90945	0.00049367	0.17325	9.4047E-05	1.0827	0.00058772	542.8261473730337	16.308	0.17109	16.284	16.225	16.396	-0.024035	0.031877	0.00020063	NaN	68.787	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60635			2335	6377	1596	1598							0.09888399019996541
ARRKALGP	8	Unmodified	_ARRKALGP_					0	0	0			REV__ENST00000456950.6_1_17:40821512-40828020:-|nuORF	REV__ENST00000456950.6_1_17:40821512-40828020:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30023193359375	2	434.777411	867.540269	0.17546	7.6284E-05	-4.3307	-0.0018829	-4.1553	-0.0018066	434.77505649144365	71.202	0.28972	71.749	71.532	71.822	0.54756					9	6	2	0	0	0	0.4196	1	7933	7933		28.254	0	1	79858	+		2336	16555	1597	1599	2737	2737					0.10120036810985766
ARRKARRRR	9	Unmodified	_ARRKARRRR_					0	0	0			REV__ENST00000393279.2_1_2:96192443-96192602:+|nuORF	REV__ENST00000393279.2_1_2:96192443-96192602:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	409.2660217285156	3	409.269417	1224.78642	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.682	1	16.727	16.227	17.227	0.0457								0	0	0	0.32292	1	178	178		22.58	0.018069	1		+		2337	26051	1598	1600	2738	2738					0.18301969433377963
ARRKCIKHE	9	Unmodified	_ARRKCIKHE_					0	0	0		ENST00000449141.2_1_20:17585804-17587788:+|nuORF	ENST00000449141.2_1_20:17585804-17587788:+|nuORF	ENST00000449141.2_1_20:17585804-17587788:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.8241577148438	2	570.824566	1139.63458	-0.44856	-0.00025605	0.18319	0.00010457	-0.26537	-0.00015148	570.8243844075674	61.574	0.9001	61.59	61.334	62.234	0.015724					68	38	2	0	0	0	0.77696	1	5352	5352		31.53	2.3598	1	801440			2338	11870	1599	1601	2739	2739					0.07034807570812518
ARRLIIPRLR	10	Unmodified	_ARRLIIPRLR_					0	0	0			REV__ENSG00000132825|ENST00000370996|PPP1R3D	REV__ENSG00000132825|ENST00000370996|PPP1R3D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	632.4276733398438	2	632.427848	1262.84114	2.8292	0.0017893	0.50757	0.000321	3.3368	0.0021103	632.4278485771309	108.34	0.724	108.31	108	108.72	-0.031487					56	31	3	0	0	0	0.85958	1	12027	12027		15.642	4.1308	1	2849900	+		2339	19037	1600	1602	2740	2740					0.2202354346145512
ARRPGEAL	8	Unmodified	_ARRPGEAL_					0	0	0			REV__ENST00000536459.6_1_19:58978535-58978598:+|nuORF	REV__ENST00000536459.6_1_19:58978535-58978598:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2516174316406	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.84341	1	8024	8024		24.203	0	1	2743300	+		2340	28410	1601	1603	2741	2741					0.048394536773685104
ARRPPHAPP	9	Unmodified	_ARRPPHAPP_					0	0	0			REV__ENST00000262525.5_1_16:30794287-30794599:-|nuORF	REV__ENST00000262525.5_1_16:30794287-30794599:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.9579162597656	2	499.785767	997.556982	0.13762	6.8781E-05	-1.1919	-0.00059571	-1.0543	-0.00052693	499.7848972129623	22.235	0.86917	21.624	21.295	22.164	-0.6107					38	21	3	0	0	0	0.20789	1	845	845		19.36	3.7182	1	416620	+		2341	24424	1602	1604	2742	2742					0.058105376969251665
ARRPSSPV	8	Unmodified	_ARRPSSPV_					0	0	0			REV__ENST00000528813.1_1_11:56099435-56099735:-|nuORF	REV__ENST00000528813.1_1_11:56099435-56099735:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2520446777344	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.884	1	7192	7192		33.516	0.70317	1	1788100	+		2342	28256	1603	1605	2743	2743					0.04839453677379879
ARRPSSPV	8	Unmodified	_ARRPSSPV_					0	0	0			REV__ENST00000528813.1_1_11:56099435-56099735:-|nuORF	REV__ENST00000528813.1_1_11:56099435-56099735:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2515563964844	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.884	1	7641	7641		33.516	0	1	2494100	+		2343	28256	1603	1605	2744	2744					0.04839453677379879
ARRQQEREQRR	11	Unmodified	_ARRQQEREQRR_					0	0	0		nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;ENSG00000071054|ENST00000324219|MAP4K4;ENST00000476609.1_1_2:102441885-102476398:+|nuORF	nc|ENSG00000071054|O95819-4|MAP4K4	nc|ENSG00000071054|O95819-4|MAP4K4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3450012207031	3	504.945327	1511.81415	0.6352	0.00032074	3.7035	0.0018701	4.3387	0.0021908	505.28102414860285	55.001	0.71356	55.569	55.236	55.95	0.56836					23	15	2	0	0	0	0.17955	1	5684	5684		12.957	0.52465	1	277880			2344	14775	1604	1606	2745	2745					0.07871783112318553
ARRQRAAARWR	11	Unmodified	_ARRQRAAARWR_					0	0	0		ENST00000284548.15_1_1:228401330-228402045:+|nuORF	ENST00000284548.15_1_1:228401330-228402045:+|nuORF	ENST00000284548.15_1_1:228401330-228402045:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.60784912109375	3	466.608098	1396.80247	-1.7237	-0.0008043	1.4346	0.00066938	-0.28915	-0.00013492	466.60870138635494	100.22	2.0707	100.39	99.305	101.38	0.17199					124	48	3	0	0	0	0.77803	1	10366	10366		15.921	0.58754	1	463800			2345	9649	1605	1607	2746	2746					0.11993630879601369
ARRRLARRP	9	Unmodified	_ARRRLARRP_					0	0	0		ENSG00000011132|ENST00000316757|APBA3;ENST00000588984.5_1_19:3751026-3754498:-|nuORF;ENST00000590064.1_1_19:3753732-3753969:-|nuORF	ENSG00000011132|ENST00000316757|APBA3	ENSG00000011132|ENST00000316757|APBA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3693237304688	2	576.370864	1150.72718	0.41559	0.00023954	-3.2236	-0.001858	-2.808	-0.0016185	576.3688772331659	49.515	1.7464	49.558	48.71	50.457	0.04224					101	42	3	0	0	0	0.78058	1	3880	3880		30.504	1.3541	1	371290			2346	781	1606	1608	2747	2747					0.1578407341919501
ARRRLARRP	9	Unmodified	_ARRRLARRP_					0	0	0		ENSG00000011132|ENST00000316757|APBA3;ENST00000588984.5_1_19:3751026-3754498:-|nuORF;ENST00000590064.1_1_19:3753732-3753969:-|nuORF	ENSG00000011132|ENST00000316757|APBA3	ENSG00000011132|ENST00000316757|APBA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3682250976562	2	576.370864	1150.72718	-1.8889	-0.0010887	-2.5062	-0.0014445	-4.3951	-0.0025332	576.3692460621713	40.332	1.1916	40.921	40.26	41.451	0.58915					99	31	4	0	0	0	0.7932	1	3503	3503		24.203	0	1	6057000			2347	781	1606	1608	2748	2748					0.1578407341919501
ARRRPPRNKT	10	Unmodified	_ARRRPPRNKT_					0	0	0			REV__ENSG00000180535|ENST00000609256|BHLHA15	REV__ENSG00000180535|ENST00000609256|BHLHA15	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2978515625	3	417.921683	1250.74322	-0.065103	-2.7208E-05	-1.6143	-0.00067464	-1.6794	-0.00070185	417.92047712453257	61.88	0.21545	62.434	62.299	62.515	0.55386					6	4	2	0	0	0	0.37624	1	6611	6611		1.4188	0	1	35742	+		2348	22402	1607	1609	2749	2749					0.1278773486544651
ARRRQGRARRA	11	Unmodified	_ARRRQGRARRA_					0	0	0			REV__nc|ENSG00000132510|O15054-1|KDM6B	REV__nc|ENSG00000132510|O15054-1|KDM6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.943359375	3	451.943481	1352.80861	-0.57993	-0.00026209	0.23285	0.00010523	-0.34708	-0.00015686	451.9434686963914	54.414	0.67409	54.364	54.07	54.744	-0.049271					51	21	3	0	0	0	0.75779	1	4517	4517		20.315	0.28454	1	176770	+		2349	29847	1608	1610	2750	2750					0.14632149111162107
ARRRQGRARRA	11	Unmodified	_ARRRQGRARRA_					0	0	0			REV__nc|ENSG00000132510|O15054-1|KDM6B	REV__nc|ENSG00000132510|O15054-1|KDM6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.9430847167969	3	451.943481	1352.80861	0.93902	0.00042438	-1.6182	-0.00073133	-0.67918	-0.00030695	451.94264736171164	50.689	2.054	51.44	50.261	52.315	0.75174					139	49	4	0	0	0	0.76892	1	4984	4984		17.833	4.8757	1	756920	+		2350	29847	1608	1610	2751	2751					0.14632149111162107
ARRRRAGT	8	Unmodified	_ARRRRAGT_					0	0	0			REV__ENST00000481904.5_1_6:35744395-35744569:+|nuORF	REV__ENST00000481904.5_1_6:35744395-35744569:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28662109375	2	472.286466	942.558379	2.4783	0.0011705	1.165	0.00055024	3.6433	0.0017207	472.28709322712206	99.355	1.7964	99.301	98.824	100.62	-0.053734					80	41	2	0	0	0	0.84341	1	10746	10746		24.203	1.1603	1	447940	+		2351	27455	1609	1611	2752	2752					0.08480171785697621
ARRRRRLGLA	10	Unmodified	_ARRRRRLGLA_					0	0	0			REV__ENST00000529368.5_1_11:502124-504456:-|nuORF	REV__ENST00000529368.5_1_11:502124-504456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9338073730469	3	408.933923	1223.77994	0.46238	0.00018908	-0.37134	-0.00015185	0.091042	3.723E-05	408.9337641207	16.291	0.68274	16.267	16.091	16.773	-0.024035					86	29	4	0	0	0	0.85834	1	126	126		22.58	0	1	1069300	+		2352	28266	1610	1612	2753	2753					0.177000314820134
ARRRRRLPA	9	Unmodified	_ARRRRRLPA_					0	0	0		ENST00000270792.9_1_1:26606524-26606650:+|nuORF	ENST00000270792.9_1_1:26606524-26606650:+|nuORF	ENST00000270792.9_1_1:26606524-26606650:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.370361328125	2	576.370864	1150.72718	0.52808	0.00030437	-4.0624	-0.0023414	-3.5343	-0.0020371	576.368351063032	43.383	1.3544	43.388	42.868	44.222	0.0057526					70	33	3	0	0	0	0.7932	1	2996	2996		23.042	3.0457	1	281870			2353	9556	1611	1613	2754	2754					0.15784073419217748
ARRRRRLPA	9	Unmodified	_ARRRRRLPA_					0	0	0		ENST00000270792.9_1_1:26606524-26606650:+|nuORF	ENST00000270792.9_1_1:26606524-26606650:+|nuORF	ENST00000270792.9_1_1:26606524-26606650:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3681640625	2	576.370864	1150.72718	0.10953	6.313E-05	-2.9717	-0.0017128	-2.8622	-0.0016497	576.3689741250236	46.486	1.2914	46.407	45.799	47.091	-0.079006					89	36	3	0	0	0	0.78536	1	3404	3404		29.15	4.6304	1	317790			2354	9556	1611	1613	2755	2755					0.15784073419217748
ARRRRRLWLKE	11	Unmodified	_ARRRRRLWLKE_					0	0	0		ENST00000606621.1_1_6:85472779-85472989:-|nuORF	ENST00000606621.1_1_6:85472779-85472989:-|nuORF	ENST00000606621.1_1_6:85472779-85472989:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.6564331054688	3	513.986687	1538.93823	0.81653	0.00041968	1.5215	0.00078203	2.338	0.0012017	514.3220287516579	15.582	0.30255	15.558	15.417	15.72	-0.024207					14	8	3	0	0	0	0.88916	1	48	48		3.4087	0.19739	1	54375			2355	14451	1612	1614	2756	2756					0.19031905670453853
ARRRRRRLLGV	11	Unmodified	_ARRRRRRLLGV_					0	0	0		ENST00000446845.5_1_3:38207005-38207431:+|nuORF	ENST00000446845.5_1_3:38207005-38207431:+|nuORF	ENST00000446845.5_1_3:38207005-38207431:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.310791015625	3	470.311393	1407.91235	0.052453	2.4669E-05	-0.23181	-0.00010902	-0.17936	-8.4354E-05	470.31115274102893	16.418	0.33107	16.478	16.38	16.711	0.059269					27	13	3	0	0	0	0.76892	1	152	152		17.833	3.5899	1	207220			2356	11840	1613	1615	2757	2757					0.22471056218819285
ARRRRRRRRWR	11	Unmodified	_ARRRRRRRRWR_					0	0	0		ENST00000510148.1_1_5:179921418-179921547:+|nuORF	ENST00000510148.1_1_5:179921418-179921547:+|nuORF	ENST00000510148.1_1_5:179921418-179921547:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3402099609375	3	561.019607	1680.03699	0.40523	0.00022734	3.6455	0.0020452	4.0507	0.0022725	561.3565367881622	102.11	0.22868	102.31	102.21	102.44	0.19484					6	5	2	0	0	0	0.18372	1	10746	10746		3.4087	1.99	1	117110			2357	13002	1614	1616	2758	2758					0.22417366478680378
ARRRRTKKKT	10	Unmodified	_ARRRRTKKKT_					0	0	0			REV__nc|ENSG00000109685|O96028-4|NSD2	REV__nc|ENSG00000109685|O96028-4|NSD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.251708984375	3	434.284733	1299.83237	-1.5779	-0.00068527	-3.4456	-0.0014964	-5.0236	-0.0021817	434.28283496184855	81.32	0.21037	81.466	81.319	81.529	0.14513					5	4	2	0	0	0	0.37624	1	7786	7786		14.694	0	1	14887	+		2358	17768	1615	1617	2759	2759					0.19444569824963764
ARRRSPRPGP	10	Unmodified	_ARRRSPRPGP_					0	0	0			REV__ENST00000345662.5_1_2:32288779-32289037:+|nuORF	REV__ENST00000345662.5_1_2:32288779-32289037:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.33935546875	2	575.33923	1148.66391	-1.4031	-0.00080726	3.7732	0.0021709	2.3701	0.0013636	575.341163197935	38.821	0.945	38.832	38.358	39.303	0.011173					51	21	3	0	0	0	0.67571	1	2667	2667		45.972	14.442	1	287500	+		2359	25316	1616	1618	2760	2760					0.09552087911310991
ARRSGRTP	8	Unmodified	_ARRSGRTP_					0	0	0		ENST00000477081.1_1_17:59477759-59482423:+|nuORF	ENST00000477081.1_1_17:59477759-59482423:+|nuORF	ENST00000477081.1_1_17:59477759-59482423:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.79730224609375	2	450.759749	899.504946	1.1042	0.00049772	2.1039	0.00094838	3.2081	0.0014461	450.76047020922516	33.711	0.79038	34.016	33.575	34.366	0.30494					37	18	4	0	0	0	0.4196	1	2476	2476		24.203	6.8378	1	581490			2360	12351	1617	1619	2761	2761					0.05117374283179288
ARRSKGKNKHS	11	Unmodified	_ARRSKGKNKHS_					0	0	0		ENSG00000250844|ENST00000504209|USP17L18;ENSG00000223569|ENST00000456464|USP17L15;ENSG00000232264|ENST00000504481|USP17L24;ENSG00000250745|ENST00000506151|USP17L20;ENSG00000249811|ENST00000506414|USP17L21;ENSG00000249104|ENST00000511568|USP17L17;ENSG00000248933|ENST00000511280|USP17L22;ENSG00000248920|ENST00000515566|USP17L19;ENSG00000233136|ENST00000457736|USP17L11;ENSG00000232399|ENST00000429667|USP17L13;ENSG00000235780|ENST00000515574|USP17L27;ENSG00000231637|ENST00000511681|USP17L29;ENSG00000231051|ENST00000504543|USP17L28;ENSG00000230430|ENST00000509271|USP17L25;ENSG00000229579|ENST00000509660|USP17L26;ENSG00000228856|ENST00000504104|USP17L30;ENSG00000227551|ENST00000415041|USP17L12;ENSG00000227140|ENST00000507227|USP17L5	ENSG00000250844|ENST00000504209|USP17L18	ENSG00000250844|ENST00000504209|USP17L18	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.89306640625	2	634.868351	1267.72215	0.93455	0.00059332	0.74827	0.00047505	1.6828	0.0010684	635.3699233940281	106.08	0.97115	106.18	106.03	107	0.099007					32	22	2	0	0	0	0.15701	1	11395	11395		54.722	28.029	1	345590			2361	8851	1618	1620	2762	2762					0.0989972476593266
ARRSPLPG	8	Unmodified	_ARRSPLPG_					0	0	0		ENST00000397118.7_1_14:24041109-24044930:-|nuORF	ENST00000397118.7_1_14:24041109-24044930:-|nuORF	ENST00000397118.7_1_14:24041109-24044930:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	427.3029479980469	2	427.253769	852.492984	-0.18229	-7.7882E-05	1.609	0.00068745	1.4267	0.00060957	427.25426819551996	64.236	0.78483	64.235	63.88	64.665	-0.00078583					36	24	2	0	0	0	0.4196	1	6032	6032		47.916	0	1	55898			2362	11140	1619	1621	2763	2763					0.06083757540000079
ARRSPVPS	8	Unmodified	_ARRSPVPS_					0	0	0			REV__ENST00000397358.7_1_8:28747965-28748196:+|nuORF	REV__ENST00000397358.7_1_8:28747965-28748196:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2547302246094	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.87479	1	8083	8083		30.504	4.9296	1	2743300	+		2363	24645	1620	1622	2764	2764					0.04839453677379879
ARRTPHLPL	9	Unmodified	_ARRTPHLPL_					0	0	0			REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.8206787109375	2	530.82235	1059.63015	0.78061	0.00041437	-3.4184	-0.0018145	-2.6378	-0.0014002	530.820404965767	82.475	1.248	82.534	82.031	83.279	0.059166					76	28	4	0	0	0	0.7932	1	8263	8263		23.042	2.0956	1	1356800	+		2364	25231	1621	1623	2765	2765					0.10271666419566827
ARRTPHLPL	9	Unmodified	_ARRTPHLPL_					0	0	0			REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8206787109375	2	530.82235	1059.63015	-0.07706	-4.0905E-05	-1.1778	-0.00062518	-1.2548	-0.00066609	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.78536	1	7599	7599		29.15	2.4566	1	1032800	+		2365	25231	1621	1623	2766	2766					0.10271666419566827
ARRTPHLPL	9	Unmodified	_ARRTPHLPL_					0	0	0			REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.820556640625	2	530.82235	1059.63015	0.64668	0.00034327	-3.3293	-0.0017672	-2.6826	-0.001424	530.8205589668217	80.04	1.1775	80.181	79.815	80.992	0.14118					115	43	3	0	0	0	0.78124	1	7627	7627		30.318	2.0634	1	892800	+		2366	25231	1621	1623	2767	2767					0.10271666419566827
ARRTPHLPL	9	Unmodified	_ARRTPHLPL_					0	0	0			REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8209228515625	2	530.82235	1059.63015	0.66638	0.00035373	-3.2295	-0.0017143	-2.5631	-0.0013606	530.8204640085535	82.305	1.3281	82.45	81.982	83.31	0.14551					83	30	4	0	0	0	0.64922	1	7931	7931		44.117	3.3386	1	1921600	+		2367	25231	1621	1623	2768	2768					0.10271666419566827
ARRTPLRLASA	11	Unmodified	_ARRTPLRLASA_					0	0	0		ENST00000359933.5_1_14:96829454-96829655:-|nuORF	ENST00000359933.5_1_14:96829454-96829655:-|nuORF	ENST00000359933.5_1_14:96829454-96829655:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	606.37060546875	2	606.370195	1210.72584	0.84903	0.00051483	-1.9782	-0.0011995	-1.1292	-0.00068469	606.3688643769136	94.076	3.4223	94.237	93.324	96.746	0.16118					202	81	3	0	0	0	0.72106	1	9569	9569		28.081	0	1	934800			2368	10439	1622	1624	2769	2769					0.12890394539795125
ARRVPPESKAK	11	Unmodified	_ARRVPPESKAK_					0	0	0		ENST00000592551.5_1_19:10196860-10198099:+|nuORF	ENST00000592551.5_1_19:10196860-10198099:+|nuORF	ENST00000592551.5_1_19:10196860-10198099:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8695068359375	2	619.870028	1237.7255	-0.18236	-0.00011304	-0.59862	-0.00037106	-0.78097	-0.0004841	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.7434	1	9725	9725		23.523	1.8369	1	2627900			2369	14290	1623	1625	2770	2770					0.11614974819917734
ARSAAKYRESH	11	Unmodified	_ARSAAKYRESH_					0	0	0			REV__ENST00000485984.1_1_1:3389348-3394597:+|nuORF;REV__ENSG00000130762|ENST00000378378|ARHGEF16	REV__ENST00000485984.1_1_1:3389348-3394597:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747802734375	3	425.889937	1274.64798	0.339	0.00014438	3.7391	0.0015924	4.0781	0.0017368	426.2266351084078	37.674	0.26684	37.987	37.825	38.091	0.31312					9	6	2	0	0	0	0.17396	1	3049	3049		20.315	2.4819	1	39968	+		2370	27537;18903	1624	1626	2771	2771					0.021643368837658272
ARSARQSVLR	10	Unmodified	_ARSARQSVLR_					0	0	0		ENSG00000161791|ENST00000335154|FMNL3;nc|ENSG00000161791|Q8IVF7|FMNL3	ENSG00000161791|ENST00000335154|FMNL3	ENSG00000161791|ENST00000335154|FMNL3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.34814453125	2	572.338895	1142.66324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.956	1	71.089	70.589	71.589	0.13356								0	0	0	0.45132	1	6441	6441		29.17	1.2878	1				2371	5654	1625	1627	2772	2772					0.09761248471613726
ARSEASLLL	9	Unmodified	_ARSEASLLL_					0	0	0		ENST00000551050.6_2_12:42866355-42876857:-|nuORF	ENST00000551050.6_2_12:42866355-42876857:-|nuORF	ENST00000551050.6_2_12:42866355-42876857:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.28106689453125	2	480.279649	958.544745	-0.79233	-0.00038054	3.3399	0.0016041	2.5475	0.0012235	480.2810198106101	99.29	1.2094	99.513	99.088	100.3	0.22262					43	28	2	0	0	0	0.76764	1	10356	10356		34.173	3.6689	1	316870			2372	13666	1626	1628	2773	2773					0.06381456443239131
ARSGQPASPLQ	11	Unmodified	_ARSGQPASPLQ_					0	0	0			REV__nc|ENSG00000170473|Q9BRP8-2|PYM1	REV__nc|ENSG00000170473|Q9BRP8-2|PYM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	556.295654296875	2	556.296362	1110.57817	-0.20822	-0.00011583	3.4599	0.0019247	3.2517	0.0018089	556.2980482880266	68.895	0.60339	68.858	68.522	69.126	-0.036957					34	21	2	0	0	0	0.59499	1	6680	6680		45.022	2.6261	1	116990	+		2373	21665	1627	1629	2774	2774					0.027304582151373324
ARSISLTHK	9	Unmodified	_ARSISLTHK_					0	0	0			REV__ENSG00000135953|ENST00000258436|MFSD9	REV__ENSG00000135953|ENST00000258436|MFSD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8021240234375	2	506.79854	1011.58253	0.2762	0.00013998	4.2956	0.002177	4.5718	0.002317	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.77266	1	3507	3507		32.751	7.1765	1	416790	+		2374	19273	1628	1630	2775	2775					0.07719967428704422
ARSLRRPPAL	10	Unmodified	_ARSLRRPPAL_					0	0	0		chr3:147412681-147413375|18|83.33|0.95|6.45|+|1|ZIC1,None|2	chr3:147412681-147413375|18|83.33|0.95|6.45|+|1|ZIC1,None|2	chr3:147412681-147413375|18|83.33|0.95|6.45|+|1|ZIC1,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8538208007812	2	568.854181	1135.69381	-1.3907	-0.00079112	-0.55616	-0.00031637	-1.9469	-0.0011075	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.86218	1	10966	10966		32.812	2.4947	1	72465000			2375	391	1629	1631	2776	2776					0.13139026856629243
ARSPDHKDH	9	Unmodified	_ARSPDHKDH_					0	0	0		ENSG00000142621|ENST00000688493|FHAD1;nc|ENSG00000142621|B1AJZ9-4|FHAD1;nc|ENSG00000142621|B1AJZ9|FHAD1;nc|ENSG00000142621|B1AJZ9-3|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.75927734375	2	531.757404	1061.50025	-0.0035221	-1.8729E-06	2.7104	0.0014413	2.7069	0.0014394	531.7587300416486	83.002	0.86864	83.433	83.087	83.956	0.43108					51	20	3	0	0	0	0.64555	1	9603	9603		44.377	5.1244	1	1395300			2376	4576	1630	1632	2777	2777					-0.028035546502451325
ARSQGKGI	8	Unmodified	_ARSQGKGI_					0	0	0		nc|ENSG00000131044|Q3SXZ7-2|TTLL9;ENSG00000131044|ENST00000535842|TTLL9	nc|ENSG00000131044|Q3SXZ7-2|TTLL9	nc|ENSG00000131044|Q3SXZ7-2|TTLL9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.73931884765625	2	408.737951	815.46135	0.14715	6.0146E-05	4.0233	0.0016445	4.1704	0.0017046	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.8621	1	1936	1936		26.693	0	1	1448600			2377	14912	1631	1633	2778	2778					0.04623764786060747
ARSSAHLK	8	Unmodified	_ARSSAHLK_					0	0	0		ENST00000585812.5_1_17:59431721-59456358:+|nuORF;ENST00000592702.5_1_17:59431721-59469483:+|nuORF;chr17:61084564-61354362|56|14.27|0.71|4.34|+|ENST00000587002|BCAS3,BCAS3	ENST00000585812.5_1_17:59431721-59456358:+|nuORF	ENST00000585812.5_1_17:59431721-59456358:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.28662109375	2	435.251226	868.487899	-0.46043	-0.0002004	3.5611	0.00155	3.1006	0.0013496	435.2532776472741	49.441	0.92778	49.901	49.064	49.992	0.45983					50	22	4	0	0	0	0.4196	1	4807	4807		23.042	1.0826	1	404180			2378	237	1632	1634	2779	2779					0.04839453677379879
ARSTSVLQQRK	11	Unmodified	_ARSTSVLQQRK_					0	0	0			REV__chr19:54106011-54110788|13|144.92|0.46|8.31|+|1|TE_info:L2a,L2a_dup159755,L2,LINE,acceptor,+,54110788,54110963|NDUFA3,None|3	REV__chr19:54106011-54110788|13|144.92|0.46|8.31|+|1|TE_info:L2a,L2a_dup159755,L2,LINE,acceptor,+,54110788,54110963|NDUFA3,None|3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	637.3687133789062	2	637.370392	1272.72623	0.0096069	6.1232E-06	0.1516	9.6623E-05	0.1612	0.00010275	637.3704089191367	105.98	2.6955	105.98	104.5	107.2	0					156	62	4	0	0	0	0.77061	1	10942	10942		17.468	1.4612	1	1384300	+		2379	15722	1633	1635	2780	2780					0.10077769468966835
ARTAIHGN	8	Unmodified	_ARTAIHGN_					0	0	0			REV__ENSG00000115020|ENST00000264380|PIKFYVE	REV__ENSG00000115020|ENST00000264380|PIKFYVE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2273864746094	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.88601	1	7689	7689		34.173	0.65696	1	961790	+		2380	18080	1634	1636	2781	2781					0.015265941262214255
ARTAIHGN	8	Unmodified	_ARTAIHGN_					0	0	0			REV__ENSG00000115020|ENST00000264380|PIKFYVE	REV__ENSG00000115020|ENST00000264380|PIKFYVE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2276916503906	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.89043	2	7368	7368;7436		42.396	0.41757	1	678130	+		2381	18080	1634	1636	2782;2783	2782					0.015265941262214255
ARTCCWPWP	9	Unmodified	_ARTCCWPWP_					0	0	0		ENST00000569796.1_1_16:2278422-2280215:+|nuORF	ENST00000569796.1_1_16:2278422-2280215:+|nuORF	ENST00000569796.1_1_16:2278422-2280215:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2906494140625	2	560.246772	1118.47899	0.032342	1.8119E-05	-1.1935	-0.00066866	-1.1612	-0.00065054	560.2461243097971	77.723	0.91048	78.291	77.879	78.789	0.56836					25	21	2	0	0	0	0.20789	1	8826	8826		9.7057	0	1	149130			2382	13985	1635	1637	2784	2784					-0.07550979274969905
ARTHACQAPW	10	Unmodified	_ARTHACQAPW_					0	0	0		ENST00000361756.7_1_11:71668304-71671834:+|nuORF;ENST00000530655.5_1_11:71640086-71671834:+|nuORF	ENST00000361756.7_1_11:71668304-71671834:+|nuORF	ENST00000361756.7_1_11:71668304-71671834:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.2706298828125	2	570.772	1139.52945	-0.22386	-0.00012777	-1.0736	-0.00061277	-1.2974	-0.00074054	571.2729180638593	56.225	0.48462	56.198	55.748	56.232	-0.027279					26	16	2	0	0	0	0.6116	1	5123	5123		49.442	10.635	1	314580			2383	10492	1636	1638	2785	2785					-0.03473733625605746
ARTLRIGVA	9	Unmodified	_ARTLRIGVA_					0	0	0			REV__chr1:17438522-17439085|23|14.48|0.02|9.23|-|2|RCC2,None|1	REV__chr1:17438522-17439085|23|14.48|0.02|9.23|-|2|RCC2,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.805908203125	2	478.803626	955.592698	0.24724	0.00011838	4.3933	0.0021035	4.6405	0.0022219	478.8055593968592	41.183	1.271	41.256	40.938	42.209	0.073414					62	33	2	0	0	0	0.7932	1	2672	2672		19.104	1.7386	1	199990	+		2384	15432	1637	1639	2786	2786					0.11312575153942817
ARTLRILKIIP	11	Unmodified	_ARTLRILKIIP_					0	0	0		ENSG00000136546|ENST00000643258|SCN7A	ENSG00000136546|ENST00000643258|SCN7A	ENSG00000136546|ENST00000643258|SCN7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.29644775390625	3	431.962485	1292.86563	-0.44437	-0.00019195	0.50686	0.00021894	0.062491	2.6994E-05	431.9626192042432	82.999	2.6147	83.43	82.279	84.894	0.43108					155	63	3	0	0	0	0.77205	1	9635	9635		17.167	8.7595	1	420940			2385	4120	1638	1640	2787	2787					0.23090758824309887
ARTLRILKIIP	11	Unmodified	_ARTLRILKIIP_					0	0	0		ENSG00000136546|ENST00000643258|SCN7A	ENSG00000136546|ENST00000643258|SCN7A	ENSG00000136546|ENST00000643258|SCN7A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	431.962485	1292.86563	-1.616	-0.00069804	1.8072	0.00078064	0.19122	8.2599E-05	431.96330152923656	83.275	2.092	83.441	82.644	84.736	0.1651	-0.019754	0.0019506	NaN	17.167	95	48	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89176			2386	4120	1638	1640							0.23090758824309887
ARTLRILKIIP	11	Unmodified	_ARTLRILKIIP_					0	0	0		ENSG00000136546|ENST00000643258|SCN7A	ENSG00000136546|ENST00000643258|SCN7A	ENSG00000136546|ENST00000643258|SCN7A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	431.962485	1292.86563	0.57794	0.00024965	-0.59075	-0.00025518	-0.012815	-5.5354E-06	431.96229212065526	83.345	1.2895	83.492	82.925	84.214	0.14694	0.031451	-0.0011569	NaN	17.167	45	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92314			2387	4120	1638	1640							0.23090758824309887
ARTLRILKIIP	11	Unmodified	_ARTLRILKIIP_					0	0	0		ENSG00000136546|ENST00000643258|SCN7A	ENSG00000136546|ENST00000643258|SCN7A	ENSG00000136546|ENST00000643258|SCN7A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	431.962485	1292.86563	-1.6784	-0.00072502	1.4669	0.00063367	-0.21148	-9.1352E-05	431.9631579998677	83.424	1.8088	83.562	82.759	84.568	0.13811	0.10215	0.0015096	NaN	17.167	68	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62795			2388	4120	1638	1640							0.23090758824309887
ARTQGVPA	8	Unmodified	_ARTQGVPA_					0	0	0		nc|ENSG00000172534|P51610-2|HCFC1;ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2257080078125	2	400.224677	798.434801	1.8836	0.00075385	2.9405	0.0011769	4.8241	0.0019307	400.22567128573456	34.872	1.5031	35.082	34.854	36.357	0.21003					89	38	3	0	0	0	0.87479	1	2638	2638		30.504	0	1	1257500			2389	6775	1639	1641	2788	2788					0.027520758947161994
ARTREPAL	8	Unmodified	_ARTREPAL_					0	0	0		ENST00000286648.9_1_4:71859257-71859437:+|nuORF	ENST00000286648.9_1_4:71859257-71859437:+|nuORF	ENST00000286648.9_1_4:71859257-71859437:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.26220703125	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.89494	1	9244	9244		37.159	5.6293	1	3505500			2390	9654	1640	1642	2789	2789					0.054357228488470355
ARTRFALG	8	Unmodified	_ARTRFALG_					0	0	0			REV__ENSG00000008300|ENST00000164024|CELSR3	REV__ENSG00000008300|ENST00000164024|CELSR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2603454589844	2	446.261594	890.508634	0.512	0.00022848	-3.1418	-0.0014021	-2.6298	-0.0011736	446.2599769742479	37.571	2.373	38.057	36.341	38.714	0.48581					136	58	5	0	0	0	0.87479	2	2996	2996;3022		30.504	4.9296	1	3317300	+		2391	16134	1641	1643	2790;2791	2790					0.059000440570343926
ARTRPTAR	8	Unmodified	_ARTRPTAR_					0	0	0			REV__ENST00000587296.1_1_19:12805448-12807039:-|nuORF	REV__ENST00000587296.1_1_19:12805448-12807039:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.77960205078125	2	464.7754	927.536246	-0.79118	-0.00036772	1.414	0.00065718	0.62279	0.00028946	464.77513213044955	38.428	0.2063	38.95	38.83	39.036	0.52236					7	4	2	0	0	0	0.4196	1	3165	3165		32.812	0.85756	1	46524	+		2392	29125	1642	1644	2792	2792					0.06957947317278013
ARVAAPAWLLP	11	Unmodified	_ARVAAPAWLLP_					0	0	0			REV__ENSG00000134851|ENST00000381334|TMEM165	REV__ENSG00000134851|ENST00000381334|TMEM165	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.84228515625	2	582.848033	1163.68151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.77	1	113.87	113.37	114.37	0.10217								0	0	0	0.56276	1	12197	12197		14.865	0.72775	1		+		2393	19172	1643	1645	2793	2793					0.10621990393588021
ARVAEARP	8	Unmodified	_ARVAEARP_					0	0	0			REV__ENST00000526177.5_1_11:75155472-75160957:-|nuORF	REV__ENST00000526177.5_1_11:75155472-75160957:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25164794921875	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87922	1	7556	7556		31.955	1.4512	1	1788100	+		2394	28201	1644	1646	2794	2794					0.048394536773685104
ARVAEARP	8	Unmodified	_ARVAEARP_					0	0	0			REV__ENST00000526177.5_1_11:75155472-75160957:-|nuORF	REV__ENST00000526177.5_1_11:75155472-75160957:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2516174316406	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.91977	1	7817	7817		45.952	7.1458	1	2743300	+		2395	28201	1644	1646	2795	2795					0.048394536773685104
ARVAEPPL	8	Unmodified	_ARVAEPPL_					0	0	0		ENST00000536835.2_1_15:29967218-29969404:+|nuORF	ENST00000536835.2_1_15:29967218-29969404:+|nuORF	ENST00000536835.2_1_15:29967218-29969404:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3023986816406	2	426.750527	851.486502	-0.15083	-6.4365E-05	-0.89554	-0.00038217	-1.0464	-0.00044654	426.7498328749898	81.876	0.95488	82.303	81.753	82.708	0.42646					35	23	2	0	0	0	0.4196	1	9437	9437		44.117	0	1	126560			2396	13441	1645	1647	2796	2796					0.054818195886127796
ARVAKKIRQLI	11	Unmodified	_ARVAKKIRQLI_					0	0	0			REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3934936523438	2	648.435338	1294.85612	1.6034	0.0010397	0.84504	0.00054795	2.4485	0.0015877	648.4364556567526	107.12	0.19802	107.26	107.2	107.4	0.13866					6	4	2	0	0	0	0.17586	1	11496	11496		18.262	6.0554	1	118060	+		2397	16940	1646	1648	2797	2797					0.2204899053876943
ARVAPCLYKL	10	Unmodified	_ARVAPCLYKL_					0	0	0			REV__ENSG00000198853|ENST00000361226|RUSC2	REV__ENSG00000198853|ENST00000361226|RUSC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3297119140625	2	567.328619	1132.64269	0.79571	0.00045143	1.1706	0.0006641	1.9663	0.0011155	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.86348	1	9707	9707		31.53	0	1	18145000	+		2398	23398	1647	1649	2798	2798					0.08166941767581193
ARVASAPW	8	Unmodified	_ARVASAPW_					0	0	0		nc|ENSG00000204267|Q03519-2|TAP2;ENSG00000204267|ENST00000374897|TAP2	nc|ENSG00000204267|Q03519-2|TAP2	nc|ENSG00000204267|Q03519-2|TAP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	429.2356872558594	2	429.235045	856.455536	-1.5383	-0.00066028	3.1941	0.001371	1.6559	0.00071075	429.23631228522396	63.563	2.4446	63.563	62.881	65.325	0					341	112	4	0	0	0	0.92457	1	5571	5571		47.916	9.1095	1	5885000			2399	8426	1648	1650	2799	2799					0.021566662743680354
ARVDPHVRIA	10	Unmodified	_ARVDPHVRIA_					0	0	0			REV__ENSG00000182601|ENST00000331351|HS3ST4	REV__ENSG00000182601|ENST00000331351|HS3ST4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.33056640625	2	567.330539	1132.64652	0.79571	0.00045143	-2.2136	-0.0012558	-1.4178	-0.00080439	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.86218	1	9225	9225		32.812	3.6629	1	18145000	+		2400	22533	1649	1651	2800	2800					0.0855074758567298
ARVDQKPGT	9	Unmodified	_ARVDQKPGT_					0	0	0			REV__ENSG00000156049|ENST00000341700|GNA14	REV__ENSG00000156049|ENST00000341700|GNA14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2674255371094	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.77244	2	8140	8140;8175		32.812	2.3088	1	1182200	+		2401	20465	1650	1652	2801;2802	2801					0.03315401640657001
ARVEEIKRLVP	11	Unmodified	_ARVEEIKRLVP_					0	0	0			REV__ENSG00000073067|ENST00000308919|CYP2W1	REV__ENSG00000073067|ENST00000308919|CYP2W1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2677001953125	3	437.269866	1308.78777	-1.7045	-0.00074531	-2.8139	-0.0012304	-4.5184	-0.0019757	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.75457	1	4185	4185		21.032	1.7696	1	3449100	+		2402	16665	1651	1653	2803	2803					0.1457270116827658
ARVEKSQPSLE	11	Unmodified	_ARVEKSQPSLE_					0	0	0		ENST00000558857.5_1_15:81589342-81591660:+|nuORF	ENST00000558857.5_1_15:81589342-81591660:+|nuORF	ENST00000558857.5_1_15:81589342-81591660:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.3357543945312	2	622.335684	1242.65681	2.3783	0.0014801	-2.0525	-0.0012774	0.32575	0.00020272	622.3342365871133	110.19	0.38945	110.24	110.14	110.52	0.054062					28	12	3	0	0	0	0.71207	1	13341	13341		14.137	0	1	822300			2403	13797	1652	1654	2804	2804					0.04519265729595645
ARVFRKVFVK	10	Unmodified	_ARVFRKVFVK_					0	0	0			REV__ENSG00000165816|ENST00000392982|VWA2	REV__ENSG00000165816|ENST00000392982|VWA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2583312988281	3	417.267909	1248.7819	-1.9219	-0.00080196	2.5653	0.0010704	0.64332	0.00026844	417.6029995212055	21.486	0.18523	21.531	21.382	21.567	0.045399					11	8	2	0	0	0	0.37624	1	572	572		10.104	3.783	1	29637	+		2404	21224	1653	1655	2805	2805					0.16745647447260126
ARVGFGPL	8	Unmodified	_ARVGFGPL_					0	0	0			REV__ENST00000590550.6_1_19:1585310-1585520:-|nuORF	REV__ENST00000590550.6_1_19:1585310-1585520:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.7390441894531	2	408.739963	815.465373	-1.9297	-0.00078873	1.2966	0.00052999	-0.63302	-0.00025874	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.9159	1	2195	2195		44.531	14.69	1	521170	+		2405	29184	1654	1656	2806	2806					0.05025854279756459
ARVGPGWL	8	Unmodified	_ARVGPGWL_					0	0	0			REV__ENSG00000182512|ENST00000331334|GLRX5	REV__ENSG00000182512|ENST00000331334|GLRX5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2613220214844	2	428.245412	854.476272	2.6359	0.0011288	3.4871	0.0014933	6.123	0.0026222	428.24697220198726	90.722	0.59979	90.769	90.347	90.947	0.046448					29	14	3	0	0	0	0.4196	1	9356	9356		29.842	10.482	1	566650	+		2406	22530	1655	1657	2807	2807					0.043212566540205444
ARVGPLLACL	10	Unmodified	_ARVGPLLACL_					0	0	0		ENSG00000121053|ENST00000225371|EPX	ENSG00000121053|ENST00000225371|EPX	ENSG00000121053|ENST00000225371|EPX	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8034973144531	2	506.802237	1011.58992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.738	1	54.765	54.265	55.265	0.027142								0	0	0	0.45132	1	4879	4879		23.042	1.0826	1				2407	3162	1656	1658	2808	2808					0.08458983704770162
ARVGRGSPLI	10	Unmodified	_ARVGRGSPLI_					0	0	0		ENST00000416640.2_3_22:21698217-21699360:+|nuORF	ENST00000416640.2_3_22:21698217-21699360:+|nuORF	ENST00000416640.2_3_22:21698217-21699360:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3157348632812	2	513.314358	1024.61416	0.3202	0.00016436	3.49	0.0017915	3.8102	0.0019558	513.3159908318282	43.284	1.4208	43.257	42.839	44.259	-0.026768					81	33	4	0	0	0	0.86718	1	3359	3359		27.882	0	1	394850			2408	11397	1657	1659	2809	2809					0.10283960182664487
ARVGVAAVGN	10	Unmodified	_ARVGVAAVGN_					0	0	0		ENST00000466300.1_1_1:898262-899729:+|nuORF;ENSG00000187961|ENST00000338591|KLHL17	ENST00000466300.1_1_1:898262-899729:+|nuORF	ENST00000466300.1_1_1:898262-899729:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26361083984375	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.86348	1	8112	8112		31.53	1.0262	1	4732500			2409	7896	1658	1660	2810	2810					0.054357228488470355
ARVGVAAVGN	10	Unmodified	_ARVGVAAVGN_					0	0	0		ENST00000466300.1_1_1:898262-899729:+|nuORF;ENSG00000187961|ENST00000338591|KLHL17	ENST00000466300.1_1_1:898262-899729:+|nuORF	ENST00000466300.1_1_1:898262-899729:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.26422119140625	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.80179	1	9491	9491		39.253	3.6345	1	4402400			2410	7896	1658	1660	2811	2811					0.054357228488470355
ARVHNKLAAAN	11	Unmodified	_ARVHNKLAAAN_					0	0	0			REV__nc|ENSG00000167395|O15015-1|ZNF646	REV__nc|ENSG00000167395|O15015-1|ZNF646	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8319091796875	2	582.833446	1163.65234	-0.83199	-0.00048491	-0.56412	-0.00032879	-1.3961	-0.0008137	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.7144	1	9751	9751		29.17	2.4771	1	796430	+		2411	21385	1659	1661	2812	2812					0.07705846097337599
ARVIEEMPT	9	Unmodified	_ARVIEEMPT_					0	0	0			REV__nc|ENSG00000169282|Q14722-2|KCNAB1	REV__nc|ENSG00000169282|Q14722-2|KCNAB1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3033447265625	2	523.270967	1044.52738	1.3976	0.0007313	3.8547	0.0020171	5.2523	0.0027484	523.2726269912255	86.314	0.76207	86.241	85.884	86.646	-0.073769					23	17	2	0	0	0	0.20789	1	8873	8873		27.882	5.9224	1	51027	+		2412	21566	1660	1662	2813	2813					0.006897928459011382
ARVIQKRVPN	10	Unmodified	_ARVIQKRVPN_					0	0	0		ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8663940429688	2	590.867289	1179.72002	-0.64255	-0.00037966	-1.0172	-0.00060105	-1.6598	-0.00098071	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.74274	1	11134	11134		42.396	8.2236	1	52912000			2413	6274	1661	1663	2814	2814					0.13735296028130506
ARVIQKRVPN	10	Unmodified	_ARVIQKRVPN_					0	0	0		ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8665771484375	2	590.867289	1179.72002	-0.76513	-0.00045209	-0.7988	-0.00047199	-1.5639	-0.00092408	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.74274	2	11190	11190;11202		42.396	13.247	1	54208000			2414	6274	1661	1663	2815;2816	2815					0.13735296028130506
ARVIQKRVPN	10	Unmodified	_ARVIQKRVPN_					0	0	0		ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8673706054688	2	590.867289	1179.72002	0.84845	0.00050132	-2.4301	-0.0014359	-1.5816	-0.00093454	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.8608	1	11116	11116		34.173	3.8548	1	94771000			2415	6274	1661	1663	2817	2817					0.13735296028130506
ARVIQKRVPN	10	Unmodified	_ARVIQKRVPN_					0	0	0		ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8665161132812	2	590.867289	1179.72002	0.89156	0.00052679	-2.3999	-0.001418	-1.5084	-0.00089125	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.74274	3	11027	11003;11027;11101		42.396	8.2236	1	84183000			2416	6274	1661	1663	2818;2819;2820	2819					0.13735296028130506
ARVIQKRVPN	10	Unmodified	_ARVIQKRVPN_					0	0	0		ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8672485351562	2	590.867289	1179.72002	-1.319	-0.00077937	-0.16176	-9.558E-05	-1.4808	-0.00087495	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.77314	1	10884	10884		40.778	5.1599	1	81379000			2417	6274	1661	1663	2821	2821					0.13735296028130506
ARVISATKH	9	Unmodified	_ARVISATKH_					0	0	0		ENST00000319041.6_1_1:26607416-26607611:+|nuORF	ENST00000319041.6_1_1:26607416-26607611:+|nuORF	ENST00000319041.6_1_1:26607416-26607611:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7953186035156	2	491.793258	981.571963	0.28747	0.00014138	3.582	0.0017616	3.8695	0.001903	491.7949445341918	43.378	1.3778	43.351	42.925	44.303	-0.026764					56	32	2	0	0	0	0.7932	1	3297	3297		24.519	0.31644	1	173750			2418	10015	1662	1664	2822	2822					0.08043984774258206
ARVIVTTQN	9	Unmodified	_ARVIVTTQN_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.29095458984375	2	501.290548	1000.56654	-1.5697	-0.00078686	1.3648	0.00068414	-0.20492	-0.00010273	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.77244	1	8316	8316		32.812	2.3088	1	9242300	+		2419	23227	1663	1665	2823	2823					0.06628261191781348
ARVIVTTQN	9	Unmodified	_ARVIVTTQN_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29046630859375	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.64555	1	10354	10354		44.377	1.981	1	9038000	+		2420	23227	1663	1665	2824	2824					0.06628261191781348
ARVKATHRKG	10	Unmodified	_ARVKATHRKG_					0	0	0			REV__ENST00000263640.7_1_2:158674937-158731406:-|nuORF	REV__ENST00000263640.7_1_2:158674937-158731406:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	562.343017578125	2	562.343981	1122.67341	0.77292	0.00043465	-1.4167	-0.00079666	-0.64375	-0.00036201	562.3430494101636	90.476	3.0468	90.629	89.657	92.704	0.15388					171	72	3	0	0	0	0.85251	1	9083	9083		19.997	0	1	591570	+		2421	24452	1664	1666	2825	2825					0.11697856196815337
ARVKEYARN	9	Unmodified	_ARVKEYARN_					0	0	0		ENSG00000181555|ENST00000409792|SETD2;nc|ENSG00000181555|Q9BYW2-2|SETD2	ENSG00000181555|ENST00000409792|SETD2	ENSG00000181555|ENST00000409792|SETD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8298950195312	2	553.806897	1105.59924	1.9396	0.0010742	-0.10215	-5.6571E-05	1.8375	0.0010176	554.3086916749755	90.191	0.38964	90.121	89.786	90.175	-0.069977					10	8	2	0	0	0	0.20789	1	9431	9431		51.335	12.083	1	25442			2422	7393	1665	1667	2826	2826					0.05066468314657868
ARVKGLII	8	Unmodified	_ARVKGLII_					0	0	0		ENSG00000185915|ENST00000379499|KLHL34	ENSG00000185915|ENST00000379499|KLHL34	ENSG00000185915|ENST00000379499|KLHL34	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2518310546875	2	435.300188	868.585822	0.2319	0.00010094	0.47495	0.00020675	0.70685	0.00030769	435.30044682986994	79.289	0.72467	79.838	79.615	80.34	0.54945					23	16	2	0	0	0	0.4196	1	9154	9154		40.573	7.057	1	58901			2423	7755	1666	1668	2827	2827					0.14627262273381803
ARVKGLII	8	Unmodified	_ARVKGLII_					0	0	0		ENSG00000185915|ENST00000379499|KLHL34	ENSG00000185915|ENST00000379499|KLHL34	ENSG00000185915|ENST00000379499|KLHL34	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2509765625	2	435.300188	868.585822	0.30197	0.00013145	1.7741	0.00077226	2.0761	0.00090371	435.30067022756674	81.162	0.16428	81.662	81.58	81.744	0.49967					5	3	2	0	0	0	0.4196	1	9373	9373		19.36	0	1	34636			2424	7755	1666	1668	2828	2828					0.14627262273381803
ARVKVVVV	8	Unmodified	_ARVKVVVV_					0	0	0			REV__ENST00000522245.1_1_8:27311571-27312006:+|nuORF	REV__ENST00000522245.1_1_8:27311571-27312006:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3001708984375	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.82419	1	6609	6609		13.775	4.953	1	1819800	+		2425	28131	1667	1669	2829	2829					0.14627262273370434
ARVLAVLCFI	10	Unmodified	_ARVLAVLCFI_					0	0	0			REV__ENSG00000175893|ENST00000380916|ZDHHC21	REV__ENSG00000175893|ENST00000380916|ZDHHC21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.8323364257812	2	552.833537	1103.65252	0.25245	0.00013956	0.41546	0.00022968	0.66791	0.00036924	552.8337647587357	83.48	1.9763	83.645	83.104	85.081	0.1651					82	45	2	0	0	0	0.86452	1	8115	8115		30.504	11.144	1	227090	+		2426	22088	1668	1670	2830	2830					0.10484129772976303
ARVLKLTFD	9	Unmodified	_ARVLKLTFD_					0	0	0		ENST00000603132.1_1_12:55196819-55197167:-|nuORF	ENST00000603132.1_1_12:55196819-55197167:-|nuORF	ENST00000603132.1_1_12:55196819-55197167:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8165283203125	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.76255	1	9154	9154		35.618	1.4457	1	4208000			2427	14421	1669	1671	2831	2831					0.09498308748334239
ARVLKVFEVF	10	Unmodified	_ARVLKVFEVF_					0	0	0			REV__ENSG00000137198|ENST00000259727|GMPR	REV__ENSG00000137198|ENST00000259727|GMPR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3667602539062	2	604.363516	1206.71248	3.2045	0.0019367	1.6316	0.00098609	4.8361	0.0029228	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.74383	3	11668	11668;11739;11874		30.318	0	1	63446000	+		2428	19367	1670	1672	2832;2833;2834	2832					0.11739143707836774
ARVLKVFEVF	10	Unmodified	_ARVLKVFEVF_					0	0	0			REV__ENSG00000137198|ENST00000259727|GMPR	REV__ENSG00000137198|ENST00000259727|GMPR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3666381835938	2	604.363516	1206.71248	1.0484	0.00063359	3.8594	0.0023325	4.9078	0.0029661	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.86338	1	11166	11166		26.693	0	1	105850000	+		2429	19367	1670	1672	2835	2835					0.11739143707836774
ARVLKVFEVF	10	Unmodified	_ARVLKVFEVF_					0	0	0			REV__ENSG00000137198|ENST00000259727|GMPR	REV__ENSG00000137198|ENST00000259727|GMPR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.36669921875	2	604.363516	1206.71248	0.90474	0.00054679	3.9121	0.0023643	4.8168	0.0029111	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.86446	3	11292	11134;11219;11292		31.53	2.3598	1	105740000	+		2430	19367	1670	1672	2836;2837;2838	2838					0.11739143707836774
ARVLLEQARR	10	Unmodified	_ARVLLEQARR_					0	0	0		ENSG00000115504|ENST00000431489|EHBP1;nc|ENSG00000115504|Q8NDI1-2|EHBP1;nc|ENSG00000115504|Q8NDI1|EHBP1;ENST00000469591.1_1_2:63169876-63182810:+|nuORF	ENSG00000115504|ENST00000431489|EHBP1	ENSG00000115504|ENST00000431489|EHBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.3698120117188	2	606.370195	1210.72584	-0.02762	-1.6748E-05	-1.0617	-0.00064376	-1.0893	-0.0006605	606.3694476526515	94.093	3.5324	94.139	93.078	96.61	0.045456					200	83	3	0	0	0	0.86763	1	9889	9889		26.693	1.1189	1	863170			2431	2850	1671	1673	2839	2839					0.12890394539772387
ARVLPLMQIPT	11	Unmodified	_ARVLPLMQIPT_					0	0	0		ENST00000311177.6_1_17:46699388-46699802:-|nuORF	ENST00000311177.6_1_17:46699388-46699802:-|nuORF	ENST00000311177.6_1_17:46699388-46699802:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8700561523438	2	619.868108	1237.72166	1.2689	0.00078657	0.89125	0.00055246	2.1602	0.001339	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.7144	1	10046	10046		29.17	0	1	6493200			2432	9922	1672	1674	2840	2840					0.11231169001871422
ARVLRATS	8	Unmodified	_ARVLRATS_					0	0	0		ENSG00000146950|ENST00000380913|SHROOM2	ENSG00000146950|ENST00000380913|SHROOM2	ENSG00000146950|ENST00000380913|SHROOM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2649230957031	2	437.266876	872.519199	1.7902	0.0007828	-4.1426	-0.0018114	-2.3524	-0.0010286	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.8347	1	808	808		23.042	0.0057756	1	738160			2433	4872	1673	1675	2841	2841					0.0778402671146523
ARVLVLCVFN	10	Unmodified	_ARVLVLCVFN_					0	0	0		nc|ENSG00000057252|P35610-3|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;ENSG00000057252|ENST00000367619|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.330078125	2	567.328619	1132.64269	2.936	0.0016657	-0.81844	-0.00046433	2.1176	0.0012014	567.3279847475538	112.89	1.1902	112.87	112.7	113.89	-0.024811					63	32	3	0	0	0	0.85251	1	12604	12604		19.997	0	1	1057400			2434	1036	1674	1676	2842	2842					0.08166941767581193
ARVNRSPLLIL	11	Unmodified	_ARVNRSPLLIL_					0	0	0		ENST00000486147.1_1_6:26091287-26093193:+|nuORF	ENST00000486147.1_1_6:26091287-26093193:+|nuORF	ENST00000486147.1_1_6:26091287-26093193:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3912353515625	2	626.398422	1250.78229	-0.23069	-0.00014451	-3.9945	-0.0025022	-4.2252	-0.0026467	626.8976589228391	108.34	0.20885	108.3	108.17	108.38	-0.042404					11	7	2	0	0	0	0.75495	1	11796	11796		20.947	6.0821	1	439820			2435	12572	1675	1677	2843	2843					0.16693022376489353
ARVPLISN	8	Unmodified	_ARVPLISN_					0	0	0			REV__nc|ENSG00000164329|Q6PIY7-2|TENT2	REV__nc|ENSG00000164329|Q6PIY7-2|TENT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2514953613281	2	435.263802	868.513051	0.55627	0.00024212	-0.74848	-0.00032579	-0.19222	-8.3665E-05	435.2628227971482	80.759	0.25079	80.902	80.825	81.076	0.14352					7	5	2	0	0	0	0.4196	1	7734	7734		52.937	0	1	13381	+		2436	21071	1676	1678	2844	2844					0.07353508479957327
ARVPQIHD	8	Unmodified	_ARVPQIHD_					0	0	0			REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2559814453125	2	468.256508	934.498464	-0.24701	-0.00011566	-3.3298	-0.0015592	-3.5768	-0.0016749	468.25479155810393	81.956	2.8945	82.014	80.909	83.803	0.057808					126	66	2	0	0	0	0.88944	1	8117	8117		57.811	15.337	1	193290	+		2437	23119	1677	1679	2845	2845					0.0285943633180068
ARVPQIHD	8	Unmodified	_ARVPQIHD_					0	0	0			REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	468.256508	934.498464	-0.39609	-0.00018547	-3.0884	-0.0014462	-3.4845	-0.0016316	468.25493712111034	81.754	1.7371	82.253	81.419	83.156	0.49967	0.095695	-0.0001053	NaN	57.811	77	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	242290	+		2438	23119	1677	1679							0.0285943633180068
ARVPYPKN	8	Unmodified	_ARVPYPKN_					0	0	0			REV__ENST00000587561.1_1_18:57020403-57026476:-|nuORF	REV__ENST00000587561.1_1_18:57020403-57026476:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7668762207031	2	472.769252	943.52395	-0.93003	-0.00043969	-3.4036	-0.0016091	-4.3336	-0.0020488	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.85277	1	8282	8282		25.45	0	1	526610	+		2439	16694	1678	1680	2846	2846					0.04992910854218735
ARVQHSATLQ	10	Unmodified	_ARVQHSATLQ_					0	0	0		chr9:129719418-129722217|48|28.69|0.95|4.92|+|0|PRRX2,PRRX2|1	chr9:129719418-129722217|48|28.69|0.95|4.92|+|0|PRRX2,PRRX2|1	chr9:129719418-129722217|48|28.69|0.95|4.92|+|0|PRRX2,PRRX2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.8068237304688	2	555.804354	1109.59415	0.2531	0.00014067	3.3715	0.0018739	3.6246	0.0020146	555.8062035865635	59.386	0.70735	59.48	59.191	59.898	0.094059					50	20	3	0	0	0	0.5442	1	5106	5106		53.089	12.311	1	269860			2440	526	1679	1681	2847	2847					0.043741644520423506
ARVQPRRY	8	Unmodified	_ARVQPRRY_					0	0	0		nc|ENSG00000196547|P49641-1|MAN2A2	nc|ENSG00000196547|P49641-1|MAN2A2	nc|ENSG00000196547|P49641-1|MAN2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3035888671875	2	523.304324	1044.5941	1.4247	0.00074556	-2.9989	-0.0015693	-1.5742	-0.00082377	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.87922	1	8802	8802		31.955	8.4322	1	3882100			2441	15185	1680	1682	2848	2848					0.0735820924271593
ARVQVVATGG	10	Unmodified	_ARVQVVATGG_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27764892578125	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.86471	1	7755	7755		30.318	4.8675	1	1311100	+		2442	17672	1681	1683	2849	2849					0.06031992020336929
ARVQVVATGG	10	Unmodified	_ARVQVVATGG_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2773742675781	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.8545	3	8080	7861;8008;8080		36.447	2.2742	1	4644500	+		2443	17672	1681	1683	2850;2851;2852	2852					0.06031992020336929
ARVQVVATGG	10	Unmodified	_ARVQVVATGG_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27734375	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.86272	1	8129	8129		24.519	0.31644	1	1929800	+		2444	17672	1681	1683	2853	2853					0.06031992020336929
ARVQVVATGG	10	Unmodified	_ARVQVVATGG_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27740478515625	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.86272	3	8639	8471;8483;8639		31.53	1.0262	1	7040000	+		2445	17672	1681	1683	2854;2855;2856	2856					0.06031992020336929
ARVQVVATGG	10	Unmodified	_ARVQVVATGG_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2773132324219	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.86272	2	8248	8248;8351		31.53	3.6476	1	7438100	+		2446	17672	1681	1683	2857;2858	2857					0.06031992020336929
ARVQVVATGG	10	Unmodified	_ARVQVVATGG_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2775573730469	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.85981	1	7926	7926		35.152	3.6222	1	1785900	+		2447	17672	1681	1683	2859	2859					0.06031992020336929
ARVQVVATGG	10	Unmodified	_ARVQVVATGG_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.277587890625	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.82886	1	8399	8399		37.812	3.639	1	6441000	+		2448	17672	1681	1683	2860	2860					0.06031992020336929
ARVQVVATGG	10	Unmodified	_ARVQVVATGG_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27764892578125	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.82886	1	9715	9715		37.812	0.65241	1	5642300	+		2449	17672	1681	1683	2861	2861					0.06031992020336929
ARVRATSL	8	Unmodified	_ARVRATSL_					0	0	0		ENSG00000027644|ENST00000368195|INSRR	ENSG00000027644|ENST00000368195|INSRR	ENSG00000027644|ENST00000368195|INSRR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2657470703125	2	437.266876	872.519199	0.72217	0.00031578	-3.1375	-0.0013719	-2.4154	-0.0010562	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.79929	1	733	733		18.324	0.95945	1	944940			2450	874	1682	1684	2862	2862					0.0778402671146523
ARVRFLGG	8	Unmodified	_ARVRFLGG_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2632751464844	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.81548	1	3115	3115		20.482	1.1219	1	3384400			2451	2259	1683	1685	2863	2863					0.07144347919665961
ARVRGRPSKPK	11	Unmodified	_ARVRGRPSKPK_					0	0	0			REV__nc|ENSG00000183784|Q5T8R8|DOCK8-AS1	REV__nc|ENSG00000183784|Q5T8R8|DOCK8-AS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.9223937988281	3	417.930067	1250.76837	0.73392	0.00030673	2.5476	0.0010647	3.2815	0.0013715	417.930858820161	105.19	0.15667	105.3	105.23	105.39	0.10766					5	3	2	0	0	0	0.17521	1	11206	11206		17.167	0	1	228200	+		2452	30089	1684	1686	2864	2864					0.15301789668023957
ARVSASHGV	9	Unmodified	_ARVSASHGV_					0	0	0		ENST00000374023.7_2_6:34555827-34556031:-|nuORF	ENST00000374023.7_2_6:34555827-34556031:-|nuORF	ENST00000374023.7_2_6:34555827-34556031:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.24163818359375	2	442.240858	882.467164	1.1524	0.00050963	-0.96747	-0.00042785	0.18491	8.1777E-05	442.24031897086877	78.91	2.9149	78.962	77.3	80.215	0.051682					176	101	2	0	0	0	0.62081	1	7691	7691		45.952	3.5558	1	354610			2453	10763	1685	1687	2865	2865					0.021228632977113193
ARVSPKGVSMV	11	Oxidation (M)	_ARVSPKGVSM(Oxidation (M))V_		ARVSPKGVSM(1)V		ARVSPKGVSM(48)V	0	0	1			REV__ENST00000399070.3_2_18:32886088-32886400:+|nuORF	REV__ENST00000399070.3_2_18:32886088-32886400:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	573.8172607421875	2	573.818615	1145.62268	0.47187	0.00027077	-3.3234	-0.001907	-2.8516	-0.0016363	573.8166375827257	36.087	1.0388	36.026	35.489	36.528	-0.060337					75	29	4	0	0	0	0.55601	1	1927	1927		47.96	8.7067	1	912290	+		2454	26219	1686	1688	2866	2866		404			0.05569146036964412
ARVSSIHN	8	Unmodified	_ARVSSIHN_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24090576171875	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.90089	1	7740	7740		39.253	3.6345	1	716910	+		2455	22270	1687	1689	2867	2867					0.021228632977113193
ARVSSIHN	8	Unmodified	_ARVSSIHN_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.24072265625	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.88601	1	8198	8198		34.173	3.6689	1	1244000	+		2456	22270	1687	1689	2868	2868					0.021228632977113193
ARVSSIHN	8	Unmodified	_ARVSSIHN_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24078369140625	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.89494	2	7884	7884;8029		38.806	3.6054	1	968500	+		2457	22270	1687	1689	2869;2870	2869					0.021228632977113193
ARVSSIHN	8	Unmodified	_ARVSSIHN_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2406005859375	2	442.240858	882.467164	-0.73522	-0.00032514	0.71434	0.00031591	-0.020876	-9.2322E-06	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.93293	1	9288	9288		51.335	15.717	1	866900	+		2458	22270	1687	1689	2871	2871					0.021228632977113193
ARVSSIHN	8	Unmodified	_ARVSSIHN_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2407531738281	2	442.240858	882.467164	0.21245	9.3954E-05	-0.1421	-6.2841E-05	0.070351	3.1112E-05	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.91977	1	9451	9451		45.952	1.8352	1	1030200	+		2459	22270	1687	1689	2872	2872					0.021228632977113193
ARVSVWVAVF	10	Unmodified	_ARVSVWVAVF_					0	0	0			REV__ENSG00000160801|ENST00000449590|PTH1R	REV__ENSG00000160801|ENST00000449590|PTH1R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3297729492188	2	567.326934	1132.63931	1.5887	0.00090129	3.6924	0.0020948	5.2811	0.0029961	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.67571	1	9413	9413		45.972	1.8554	1	5459400	+		2460	20742	1688	1690	2873	2873					0.07830014985211164
ARVSVWVAVF	10	Unmodified	_ARVSVWVAVF_					0	0	0			REV__ENSG00000160801|ENST00000449590|PTH1R	REV__ENSG00000160801|ENST00000449590|PTH1R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3302612304688	2	567.326934	1132.63931	1.8589	0.0010546	3.176	0.0018018	5.0349	0.0028564	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.82886	1	9694	9694		37.812	3.8899	1	15439000	+		2461	20742	1688	1690	2874	2874					0.07830014985211164
ARVSVWVAVF	10	Unmodified	_ARVSVWVAVF_					0	0	0			REV__ENSG00000160801|ENST00000449590|PTH1R	REV__ENSG00000160801|ENST00000449590|PTH1R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3292236328125	2	567.326934	1132.63931	2.937	0.0016662	2.4805	0.0014072	5.4174	0.0030735	567.3281928791553	117.74	0.69537	117.71	117.25	117.94	-0.02433					30	23	2	0	0	0	0.86047	1	13017	13017		23.523	1.5628	1	79498	+		2462	20742	1688	1690	2875	2875					0.07830014985211164
ARVSVWVAVF	10	Unmodified	_ARVSVWVAVF_					0	0	0			REV__ENSG00000160801|ENST00000449590|PTH1R	REV__ENSG00000160801|ENST00000449590|PTH1R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.330078125	2	567.326934	1132.63931	1.492	0.00084643	3.8266	0.002171	5.3186	0.0030174	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.85934	4	9397	9264;9289;9359;9397		35.618	7.736	1	5346500	+		2463	20742	1688	1690	2876;2877;2878;2879	2879					0.07830014985211164
ARVSVWVAVF	10	Unmodified	_ARVSVWVAVF_					0	0	0			REV__ENSG00000160801|ENST00000449590|PTH1R	REV__ENSG00000160801|ENST00000449590|PTH1R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3302612304688	2	567.326934	1132.63931	1.497	0.00084932	3.499	0.0019851	4.9961	0.0028344	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.71042	1	9540	9540		44.117	13.613	1	15259000	+		2464	20742	1688	1690	2880	2880					0.07830014985211164
ARVSVWVAVF	10	Unmodified	_ARVSVWVAVF_					0	0	0			REV__ENSG00000160801|ENST00000449590|PTH1R	REV__ENSG00000160801|ENST00000449590|PTH1R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.32958984375	2	567.326934	1132.63931	0.79571	0.00045143	4.1414	0.0023495	4.9371	0.0028009	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.64457	2	9761	9683;9761		47.657	10.498	1	18145000	+		2465	20742	1688	1690	2881;2882	2882					0.07830014985211164
ARVSVWVAVF	10	Unmodified	_ARVSVWVAVF_					0	0	0			REV__ENSG00000160801|ENST00000449590|PTH1R	REV__ENSG00000160801|ENST00000449590|PTH1R	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3300170898438	2	567.326934	1132.63931	1.3743	0.0007797	3.9991	0.0022688	5.3735	0.0030485	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.86471	1	10895	10895		30.318	1.1682	1	6182600	+		2466	20742	1688	1690	2883	2883					0.07830014985211164
ARVTKGETLTR	11	Unmodified	_ARVTKGETLTR_					0	0	0		nc|ENSG00000254999|Q8WUW1-2|BRK1	nc|ENSG00000254999|Q8WUW1-2|BRK1	nc|ENSG00000254999|Q8WUW1-2|BRK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	411.2432861328125	3	411.242088	1230.70443	2.7172	0.0011174	0.95472	0.00039262	3.6719	0.0015101	411.2422057573565	103.06	0.41344	103.01	102.83	103.24	-0.047005					16	9	2	0	0	0	0.73277	1	11279	11279		25.892	1.6158	1	859060			2467	15294	1689	1691	2884	2884					0.09830964720413249
ARVTLTNNL	9	Unmodified	_ARVTLTNNL_					0	0	0		ENSG00000183090|ENST00000329798|FREM3	ENSG00000183090|ENST00000329798|FREM3	ENSG00000183090|ENST00000329798|FREM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2901611328125	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.75725	1	10111	10111		36.447	2.2742	1	9038000			2468	7500	1690	1692	2885	2885					0.06628261191792717
ARVVLQNN	8	Unmodified	_ARVVLQNN_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.263916015625	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.89043	2	7850	7748;7850		37.159	2.1027	1	2957200	+		2469	29748	1691	1693	2886;2887	2887					0.054357228488470355
ARVVLQNN	8	Unmodified	_ARVVLQNN_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2637939453125	2	457.264333	912.514114	-0.13162	-6.0186E-05	0.19173	8.7669E-05	0.060104	2.7483E-05	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.87922	1	7807	7807		31.955	0.42505	1	1194000	+		2470	29748	1691	1693	2888	2888					0.054357228488470355
ARVVLQNN	8	Unmodified	_ARVVLQNN_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2638244628906	2	457.264333	912.514114	0.21557	9.8573E-05	-0.19878	-9.0895E-05	0.016791	7.678E-06	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.87922	1	7939	7939		31.955	2.8053	1	1366100	+		2471	29748	1691	1693	2889	2889					0.054357228488470355
ARVVLQNN	8	Unmodified	_ARVVLQNN_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.263916015625	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.84341	2	7890	7829;7890		37.159	10.466	1	1458600	+		2472	29748	1691	1693	2890;2891	2891					0.054357228488470355
ARVVLQNN	8	Unmodified	_ARVVLQNN_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.263916015625	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.87064	2	7566	7490;7566		31.955	0	1	1262800	+		2473	29748	1691	1693	2892;2893	2893					0.054357228488470355
ARVVLQNN	8	Unmodified	_ARVVLQNN_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2642822265625	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.87064	2	7882	7882;8177		29.15	2.3535	1	4597500	+		2474	29748	1691	1693	2894;2895	2894					0.054357228488470355
ARVVLQNN	8	Unmodified	_ARVVLQNN_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26361083984375	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.89494	1	7466	7466		37.159	5.2042	1	1032000	+		2475	29748	1691	1693	2896	2896					0.054357228488470355
ARVVLQNN	8	Unmodified	_ARVVLQNN_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26361083984375	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.87064	2	8050	7948;8050		30.504	3.5755	1	4061400	+		2476	29748	1691	1693	2897;2898	2898					0.054357228488470355
ARVVLQNN	8	Unmodified	_ARVVLQNN_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2639465332031	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.87064	4	9469	9434;9457;9469;9591		38.806	4.6336	1	3505500	+		2477	29748	1691	1693	2899;2900;2901;2902	2901					0.054357228488470355
ARVVPGPMPLP	11	Unmodified	_ARVVPGPMPLP_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.32958984375	2	567.328619	1132.64269	0.77491	0.00043963	1.7436	0.00098922	2.5185	0.0014288	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.6921	1	9080	9080		32.812	1.2826	1	6344600	+		2478	20085	1692	1694	2903	2903					0.08166941767581193
ARVVPGPMPLP	11	Unmodified	_ARVVPGPMPLP_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3304443359375	2	567.328619	1132.64269	1.3743	0.0007797	1.0283	0.00058341	2.4027	0.0013631	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.6921	1	10943	10943		32.812	6.1195	1	6182600	+		2479	20085	1692	1694	2904	2904					0.08166941767581193
ARVVRGPD	8	Unmodified	_ARVVRGPD_					0	0	0		ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2518005371094	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.89962	1	7589	7589		38.806	6.8513	1	1788100			2480	1959	1693	1695	2905	2905					0.04839453677379879
ARVVRGPD	8	Unmodified	_ARVVRGPD_					0	0	0		ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2521667480469	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.87922	1	8376	8376		31.955	3.7006	1	3292300			2481	1959	1693	1695	2906	2906					0.04839453677379879
ARVVRGPD	8	Unmodified	_ARVVRGPD_					0	0	0		ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2514953613281	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.87479	1	7723	7723		30.504	0	1	2743300			2482	1959	1693	1695	2907	2907					0.04839453677379879
ARVVRGPD	8	Unmodified	_ARVVRGPD_					0	0	0		ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2517395019531	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.88601	3	9316	9266;9293;9316		53.351	17.733	1	2020200			2483	1959	1693	1695	2908;2909;2910	2910					0.04839453677379879
ARVVVRVN	8	Unmodified	_ARVVVRVN_					0	0	0		ENSG00000165323|ENST00000525166|FAT3;nc|ENSG00000165323|Q8TDW7|FAT3	ENSG00000165323|ENST00000525166|FAT3	ENSG00000165323|ENST00000525166|FAT3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7721862792969	2	456.790518	911.566484	1.3689	0.00062531	-2.8753	-0.0013134	-1.5064	-0.00068811	456.79085162416794	90.07	0.17285	90	89.874	90.047	-0.069969					5	3	2	0	0	0	0.4196	1	9414	9414		23.042	3.0457	1	21357			2484	6072	1694	1696	2911	2911					0.10716305982464291
ARWAEAPP	8	Unmodified	_ARWAEAPP_					0	0	0			REV__ENST00000346693.8_1_X:149935131-149935296:-|nuORF	REV__ENST00000346693.8_1_X:149935131-149935296:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.23321533203125	2	449.232502	896.450451	-1.2863	-0.00057784	-2.9752	-0.0013366	-4.2615	-0.0019144	449.2311264032564	83.242	4.4752	83.407	81.466	85.941	0.1651					199	104	3	0	0	0	0.86791	1	8085	8085		28.254	3.7503	1	231800	+		2485	25321	1695	1697	2912	2912					-0.0019163758826152844
ARWAPGVL	8	Unmodified	_ARWAPGVL_					0	0	0		ENST00000465256.5_1_1:32193589-32201220:-|nuORF	ENST00000465256.5_1_1:32193589-32201220:-|nuORF	ENST00000465256.5_1_1:32193589-32201220:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2518615722656	2	435.253237	868.491922	-1.5606	-0.00067925	-2.838	-0.0012352	-4.3985	-0.0019145	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.86288	1	7834	7834		26.796	0.10319	1	3322700			2486	12106	1696	1698	2913	2913					0.0524154317108696
ARWAQPAL	8	Unmodified	_ARWAQPAL_					0	0	0		ENST00000323013.6_1_22:42908285-42908810:-|nuORF	ENST00000323013.6_1_22:42908285-42908810:-|nuORF	ENST00000323013.6_1_22:42908285-42908810:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30126953125	2	456.756144	911.497735	-0.73843	-0.00033728	-3.5037	-0.0016004	-4.2422	-0.0019376	456.7544824252051	35.709	0.63042	35.654	35.295	35.925	-0.055901					21	13	2	0	0	0	0.4196	1	2322	2322		31.955	17.291	1	40232			2487	10049	1697	1699	2914	2914					0.03844641682735528
ARWFLKSN	8	Unmodified	_ARWFLKSN_					0	0	0			REV__nc|ENSG00000084734|Q14397|GCKR	REV__nc|ENSG00000084734|Q14397|GCKR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.292236328125	2	511.282526	1020.5505	0.35155	0.00017974	-1.7369	-0.00088803	-1.3853	-0.00070828	511.2814673547693	53.403	0.61983	53.817	53.499	54.119	0.4139					33	14	3	0	0	0	0.4196	1	5392	5392		14.137	0.36179	1	515720	+		2488	16881	1698	1700	2915	2915					0.04104599745562609
ARWLPLGLG	9	Unmodified	_ARWLPLGLG_					0	0	0		nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2;ENSG00000175166|ENST00000310118|PSMD2	nc|ENSG00000175166|Q13200-2|PSMD2	nc|ENSG00000175166|Q13200-2|PSMD2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.797607421875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.064	1	60.051	59.551	60.551	-0.013729								0	0	0	0.32894	1	5539	5539		20.482	0	1				2489	6993	1699	1701	2916	2916					0.08446074267988024
ARWLPLGLG	9	Unmodified	_ARWLPLGLG_					0	0	0		nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2;ENSG00000175166|ENST00000310118|PSMD2	nc|ENSG00000175166|Q13200-2|PSMD2	nc|ENSG00000175166|Q13200-2|PSMD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7942199707031	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.7932	1	4332	4332		24.203	3.7209	1	1111900			2490	6993	1699	1701	2917	2917					0.08446074267988024
ARWLTPGIPAL	11	Unmodified	_ARWLTPGIPAL_					0	0	0		ENST00000366264.6_1_3:10028614-10028719:+|nuORF	ENST00000366264.6_1_3:10028614-10028719:+|nuORF	ENST00000366264.6_1_3:10028614-10028719:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.85595703125	2	597.853316	1193.69208	0.93582	0.00055948	3.9067	0.0023357	4.8426	0.0028951	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.61369	1	9294	9294		42.864	5.0528	1	2638300			2491	10505	1700	1702	2918	2918					0.10297973048022868
ARWLVPALLL	10	Unmodified	_ARWLVPALLL_					0	0	0			REV__ENST00000491166.1_1_13:114201574-114203850:+|nuORF	REV__ENST00000491166.1_1_13:114201574-114203850:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3689575195312	2	576.368601	1150.72265	0.35965	0.00020729	0.12398	7.1455E-05	0.48363	0.00027875	576.3684427135254	43.121	1.8301	43.178	42.557	44.387	0.056744					99	45	3	0	0	0	0.8488	1	2957	2957		17.365	0.89182	1	329330	+		2492	20209	1701	1703	2919	2919					0.15331751433086538
ARYFIGLISII	11	Unmodified	_ARYFIGLISII_					0	0	0		ENSG00000104290|ENST00000240093|FZD3	ENSG00000104290|ENST00000240093|FZD3	ENSG00000104290|ENST00000240093|FZD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5927429199219	3	422.592058	1264.75434	-1.8214	-0.00076972	3.2668	0.0013805	1.4454	0.00061079	422.5933529014654	49.394	1.9735	49.419	48.567	50.541	0.025574					182	52	4	0	0	0	0.74405	1	3889	3889		23.378	0.81632	1	2033600			2493	2122	1702	1704	2920	2920					0.13255699396381715
ARYFIGLISII	11	Unmodified	_ARYFIGLISII_					0	0	0		ENSG00000104290|ENST00000240093|FZD3	ENSG00000104290|ENST00000240093|FZD3	ENSG00000104290|ENST00000240093|FZD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5926208496094	3	422.592058	1264.75434	-1.8117	-0.0007656	4.0069	0.0016933	2.1952	0.00092767	422.59357864263933	54.504	2.542	54.559	53.757	56.299	0.055611					235	90	4	0	0	0	0.76892	1	4453	4453		17.833	0.6664	1	1177200			2494	2122	1702	1704	2921	2921					0.13255699396381715
ARYHKEVVFMH	11	Unmodified	_ARYHKEVVFMH_					0	0	0		nc|ENSG00000112303|O95498-4|VNN2	nc|ENSG00000112303|O95498-4|VNN2	nc|ENSG00000112303|O95498-4|VNN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.2148132324219	3	472.911685	1415.71322	-0.55712	-0.00026347	1.7779	0.0008408	1.2208	0.00057733	472.9124407197964	48.751	0.72017	49.211	48.779	49.499	0.45983					35	17	3	0	0	0	0.17305	1	4724	4724		30.569	14.648	1	553250			2495	14851	1703	1705	2922	2922					0.021996150852146457
ARYHKEVVFMH	11	Unmodified	_ARYHKEVVFMH_					0	0	0		nc|ENSG00000112303|O95498-4|VNN2	nc|ENSG00000112303|O95498-4|VNN2	nc|ENSG00000112303|O95498-4|VNN2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	472.911685	1415.71322	-0.77779	-0.00036783	2.0256	0.00095792	1.2478	0.00059009	472.91258009929106	48.587	0.63838	49.491	49.126	49.765	0.90424	0.13984	0.00015175	NaN	24.232	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	503170			2496	14851	1703	1705							0.021996150852146457
ARYKIKNKLK	10	Unmodified	_ARYKIKNKLK_					0	0	0			REV__nc|ENSG00000196586|Q9UM54-5|MYO6	REV__nc|ENSG00000196586|Q9UM54-5|MYO6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.57708740234375	3	421.274952	1260.80303	1.142	0.0004811	-1.0367	-0.00043674	0.10531	4.4364E-05	421.2743661754429	20.827	0.527	20.368	20.1	20.627	-0.4591					18	12	2	0	0	0	0.37624	1	693	693		25.126	9.7929	1	25455	+		2497	23150	1704	1706	2923	2923					0.18305612756103073
ASAAPGPGVQF	11	Unmodified	_ASAAPGPGVQF_					0	0	0			REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2573547363281	2	501.256174	1000.49779	-1.1292	-0.00056602	2.4311	0.0012186	1.3019	0.00065257	501.25733123430626	74.453	1.2528	74.453	74.007	75.26	0					113	50	3	0	0	0	0.69995	1	6715	6715		31.53	0	1	578760	+		2498	26425	1705	1707	2924	2924					-0.0024340310789057185
ASAAPGPGVQF	11	Unmodified	_ASAAPGPGVQF_					0	0	0			REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	501.256174	1000.49779	-0.065742	-3.2954E-05	1.1872	0.00059507	1.1214	0.00056212	501.25670766222777	74.045	0.78558	74.088	73.832	74.617	0.0429	0.087041	-0.00064303	NaN	31.53	84	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	607420	+		2499	26425	1705	1707							-0.0024340310789057185
ASAAPGPGVQF	11	Unmodified	_ASAAPGPGVQF_					0	0	0			REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	501.256174	1000.49779	-0.36517	-0.00018305	1.5239	0.00076386	1.1587	0.00058081	501.2568380880825	73.964	1.0461	73.922	73.585	74.631	-0.042007	-0.078667	-0.00030545	NaN	31.53	89	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	708100	+		2500	26425	1705	1707							-0.0024340310789057185
ASAAPGPGVQF	11	Unmodified	_ASAAPGPGVQF_					0	0	0			REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	501.256174	1000.49779	-1.1826	-0.00059281	2.2728	0.0011393	1.0902	0.00054647	501.25723645305027	73.791	0.95151	73.835	73.576	74.528	0.043648	-0.16579	0.00044539	NaN	31.53	99	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	616410	+		2501	26425	1705	1707							-0.0024340310789057185
ASAAPGPGVQF	11	Unmodified	_ASAAPGPGVQF_					0	0	0			REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	501.256174	1000.49779	-0.52813	-0.00026473	1.754	0.00087921	1.2259	0.00061448	501.2569410473003	73.752	1.0389	73.879	73.549	74.588	0.12711	-0.12148	-7.4756E-05	NaN	31.53	100	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	729760	+		2502	26425	1705	1707							-0.0024340310789057185
ASAAPGPGVQF	11	Unmodified	_ASAAPGPGVQF_					0	0	0			REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	501.256174	1000.49779	0.56044	0.00028092	0.53812	0.00026974	1.0986	0.00055066	501.2563374455258	73.691	0.933	73.822	73.543	74.476	0.13126	-0.17833	-0.0012937	NaN	31.53	92	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	606480	+		2503	26425	1705	1707							-0.0024340310789057185
ASAAPGPGVQF	11	Unmodified	_ASAAPGPGVQF_					0	0	0			REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	REV__ENST00000485432.1_1_3:17665388-17784150:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	501.256174	1000.49779	-1.1133	-0.00055806	2.3256	0.0011657	1.2123	0.00060765	501.25724351341563	73.92	0.83861	74.006	73.721	74.56	0.085907	0.0047265	0.00049825	NaN	31.53	92	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	612520	+		2504	26425	1705	1707							-0.0024340310789057185
ASAGEPAPGPT	11	Unmodified	_ASAGEPAPGPT_					0	0	0			REV__ENST00000373758.4_1_10:65281135-65281300:+|nuORF	REV__ENST00000373758.4_1_10:65281135-65281300:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	477.7305908203125	2	477.729989	953.445425	-0.68246	-0.00032603	1.2463	0.00059537	0.56379	0.00026934	477.7302920495723	22.91	0.42686	22.86	22.662	23.089	-0.050077					17	13	2	0	0	0	0.64498	1	714	714		39.253	0.44669	1	23300	+		2505	25770	1706	1708	2925	2925					-0.03315986241511837
ASAGEPAPGPT	11	Unmodified	_ASAGEPAPGPT_					0	0	0			REV__ENST00000373758.4_1_10:65281135-65281300:+|nuORF	REV__ENST00000373758.4_1_10:65281135-65281300:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	477.729989	953.445425	-0.28514	-0.00013622	0.92141	0.00044018	0.63626	0.00030396	477.7301516578541	22.924	0.44676	22.872	22.657	23.104	-0.052114	0.0059695	-0.00017369	NaN	39.253	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27379	+		2506	25770	1706	1708							-0.03315986241511837
ASAGEPAPGPT	11	Unmodified	_ASAGEPAPGPT_					0	0	0			REV__ENST00000373758.4_1_10:65281135-65281300:+|nuORF	REV__ENST00000373758.4_1_10:65281135-65281300:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	477.729989	953.445425	-0.68246	-0.00032603	1.2463	0.00059537	0.56379	0.00026934	477.7302920495723	22.91	0.42686	22.86	22.662	23.089	-0.050077	-0.0059695	0.00013669	NaN	39.253	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23300	+		2507	25770	1706	1708							-0.03315986241511837
ASALVVLIP	9	Unmodified	_ASALVVLIP_					0	0	0			REV__nc|ENSG00000172752|A8TX70-2|COL6A5	REV__nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7872314453125	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.7932	1	3649	3649		18.324	0	1	493390	+		2508	21854	1707	1709	2926	2926					0.11308733942325944
ASAPPSRPP	9	Unmodified	_ASAPPSRPP_					0	0	0			REV__ENSG00000232434|ENST00000436881|AJM1	REV__ENSG00000232434|ENST00000436881|AJM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.88629150390625	2	440.237784	878.461016	0.27217	0.00011982	0.094844	4.1754E-05	0.36701	0.00016157	440.2377973012696	18.892	0.43093	18.415	18.171	18.602	-0.47694					14	9	2	0	0	0	0.20789	1	422	422		30.504	1.3541	1	49221	+		2509	23771	1708	1710	2927	2927					0.016923450661806783
ASAPPSRPP	9	Unmodified	_ASAPPSRPP_					0	0	0			REV__ENSG00000232434|ENST00000436881|AJM1	REV__ENSG00000232434|ENST00000436881|AJM1	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	440.237784	878.461016	-2.1641	-0.00095272	2.7837	0.0012255	0.6196	0.00027277	440.23883327013453	18.302	0.34579	18.302	18.177	18.523	0	-0.027467	0.0020097	NaN	30.504	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38593	+		2510	23771	1708	1710							0.016923450661806783
ASAPPSRPP	9	Unmodified	_ASAPPSRPP_					0	0	0			REV__ENSG00000232434|ENST00000436881|AJM1	REV__ENSG00000232434|ENST00000436881|AJM1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	440.237784	878.461016	0.94186	0.00041464	-0.30074	-0.0001324	0.64113	0.00028225	440.23748516276834	18.134	0.355	18.21	18.063	18.418	0.075441	-0.11968	-0.00070604	NaN	30.504	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75602	+		2511	23771	1708	1710							0.016923450661806783
ASAPPSRPP	9	Unmodified	_ASAPPSRPP_					0	0	0			REV__ENSG00000232434|ENST00000436881|AJM1	REV__ENSG00000232434|ENST00000436881|AJM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	440.237784	878.461016	-1.5741	-0.00069298	1.8946	0.00083409	0.32053	0.00014111	440.2385529809531	18.315	0.29972	18.359	18.239	18.539	0.044048	0.030166	0.0012269	NaN	30.504	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98901	+		2512	23771	1708	1710							0.016923450661806783
ASAPPSRPP	9	Unmodified	_ASAPPSRPP_					0	0	0			REV__ENSG00000232434|ENST00000436881|AJM1	REV__ENSG00000232434|ENST00000436881|AJM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	440.237784	878.461016	0.0197	8.6728E-06	0.46163	0.00020323	0.48133	0.0002119	440.2379084629319	18.241	0.25112	18.308	18.136	18.387	0.066296	-0.021425	-3.4793E-05	NaN	30.504	18	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59747	+		2513	23771	1708	1710							0.016923450661806783
ASAPRLMV	8	Unmodified	_ASAPRLMV_					0	0	0		nc|ENSG00000009307|O75534-2|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.7378845214844	2	422.739105	843.463658	-0.059522	-2.5162E-05	-3.1491	-0.0013312	-3.2086	-0.0013564	422.7376129425624	50.332	0.66045	50.33	49.95	50.61	-0.0020447					33	15	3	0	0	0	0.88944	2	4247	4247;4270		57.811	12.715	1	383010			2514	752	1709	1711	2928;2929	2928					0.03566477199490237
ASAPRLMV	8	Unmodified	_ASAPRLMV_					0	0	0		nc|ENSG00000009307|O75534-2|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.73748779296875	2	422.739105	843.463658	-0.77621	-0.00032813	-2.4781	-0.0010476	-3.2543	-0.0013757	422.7378951126444	50.312	0.74002	50.289	49.9	50.64	-0.02343					38	16	3	0	0	0	0.92457	1	4356	4356		47.916	3.3845	1	448720			2515	752	1709	1711	2930	2930					0.03566477199490237
ASAPRLMV	8	Unmodified	_ASAPRLMV_					0	0	0		nc|ENSG00000009307|O75534-2|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.7379150390625	2	422.739105	843.463658	-0.53791	-0.00022739	-2.7254	-0.0011521	-3.2633	-0.0013795	422.7377416558333	50.417	0.70982	50.325	49.976	50.685	-0.091793					51	20	4	0	0	0	0.92457	1	3970	3970		47.916	3.3845	1	324900			2516	752	1709	1711	2931	2931					0.03566477199490237
ASAPRQSH	8	Unmodified	_ASAPRQSH_					0	0	0			REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3028869628906	2	427.217383	852.420213	-0.029782	-1.2723E-05	-0.84834	-0.00036243	-0.87813	-0.00037515	427.2167345423385	80.042	0.21051	80.459	80.296	80.506	0.41621					7	4	2	0	0	0	0.4196	1	9165	9165		31.955	12.595	1	102650	+		2517	27299	1710	1712	2932	2932					-0.011899962534357655
ASAPRQSH	8	Unmodified	_ASAPRQSH_					0	0	0			REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	427.217383	852.420213	-1.2864	-0.00054957	-0.072308	-3.0891E-05	-1.3587	-0.00058046	427.216977353682	80.88	1.8393	80.88	79.553	81.392	0	0.21936	0.00018005	NaN	31.955	91	71	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128850	+		2518	27299	1710	1712							-0.011899962534357655
ASAPRQSH	8	Unmodified	_ASAPRQSH_					0	0	0			REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	427.217383	852.420213	-0.18128	-7.7448E-05	-0.44218	-0.00018891	-0.62347	-0.00026636	427.21701222187795	80.637	3.545	80.7	79.448	82.993	0.062233	0.039412	-0.00013598	NaN	31.955	121	95	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	187630	+		2519	27299	1710	1712							-0.011899962534357655
ASAPRQSH	8	Unmodified	_ASAPRQSH_					0	0	0			REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	427.217383	852.420213	0.25234	0.0001078	-0.28865	-0.00012332	-0.036306	-1.5511E-05	427.21711091259107	80.651	3.748	80.591	79.02	82.768	-0.059692	-0.068802	-4.7975E-06	NaN	31.955	191	104	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186100	+		2520	27299	1710	1712							-0.011899962534357655
ASAPRQSH	8	Unmodified	_ASAPRQSH_					0	0	0			REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	427.217383	852.420213	2.1032	0.00089851	-2.0031	-0.00085578	0.10003	4.2734E-05	427.216336836768	80.492	3.0251	80.548	79.267	82.292	0.055916	-0.11265	-0.0014697	NaN	31.955	153	83	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	215490	+		2521	27299	1710	1712							-0.011899962534357655
ASAPRQSH	8	Unmodified	_ASAPRQSH_					0	0	0			REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	427.217383	852.420213	-1.702	-0.00072712	1.5145	0.00064703	-0.18746	-8.0087E-05	427.2178596806221	80.628	3.6893	80.765	78.965	82.654	0.13702	0.10429	0.0015359	NaN	31.955	181	102	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	198460	+		2522	27299	1710	1712							-0.011899962534357655
ASAPRQSH	8	Unmodified	_ASAPRQSH_					0	0	0			REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	REV__ENST00000474383.1_1_7:151534428-151573717:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	427.217383	852.420213	0.55255	0.00023606	-0.90777	-0.00038781	-0.35522	-0.00015176	427.21682733607605	80.539	2.7986	80.68	79.572	82.371	0.14117	0.020123	-0.0005338	NaN	31.955	132	85	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189860	+		2523	27299	1710	1712							-0.011899962534357655
ASAQHVIQQV	10	Unmodified	_ASAQHVIQQV_					0	0	0			REV__ENSG00000167967|ENST00000301727|E4F1	REV__ENSG00000167967|ENST00000301727|E4F1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.6799926757812	2	540.793455	1079.57236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.838	1	20.379	19.879	20.879	-0.4591								0	0	0	0.45132	1	698	698		44.377	7.9304	1		+		2524	21439	1711	1713	2933	2933					0.035753597034727136
ASASVKTSAGT	11	Unmodified	_ASASVKTSAGT_					0	0	0		nc|ENSG00000135525|Q14244-5|MAP7;nc|ENSG00000135525|Q14244-3|MAP7;nc|ENSG00000135525|Q14244-2|MAP7;nc|ENSG00000135525|Q14244-6|MAP7;nc|ENSG00000135525|Q14244-4|MAP7;ENSG00000135525|ENST00000354570|MAP7;nc|ENSG00000135525|Q14244-7|MAP7	nc|ENSG00000135525|Q14244-5|MAP7	nc|ENSG00000135525|Q14244-5|MAP7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.2587585449219	2	490.256371	978.498189	1.5736	0.00077149	1.8059	0.00088537	3.3796	0.0016569	490.25714425919216	107.1	2.1346	107.2	105.77	107.9	0.10396					168	84	3	0	0	0	0.67778	1	13096	13096		35.152	1.6364	1	1431500			2525	4031	1712	1714	2934	2934					0.008079718212911757
ASAWTVSPR	9	Unmodified	_ASAWTVSPR_					0	0	0		ENST00000473964.5_1_1:2433496-2434522:+|nuORF;nc|ENSG00000149527|O75038-5|PLCH2;ENST00000343889.8_1_1:2411150-2434522:+|nuORF;nc|ENSG00000149527|O75038-4|PLCH2	ENST00000473964.5_1_1:2433496-2434522:+|nuORF	ENST00000473964.5_1_1:2433496-2434522:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.757080078125	2	487.756341	973.498129	1.4212	0.0006932	2.2137	0.0010798	3.6349	0.001773	487.7571849290329	24.126	0.72989	23.612	23.238	23.968	-0.51365					31	16	3	0	0	0	0.6204	1	1151	1151		45.972	0.020292	1	134680			2526	10283	1713	1715	2935	2935					0.01032016611952713
ASCFFTKY	8	Carbamidomethyl (C)	_ASC(Carbamidomethyl (C))FFTKY_	ASC(1)FFTKY		ASC(51)FFTKY		0	1	0		ENST00000486831.5_1_3:138189538-138191915:+|nuORF	ENST00000486831.5_1_3:138189538-138191915:+|nuORF	ENST00000486831.5_1_3:138189538-138191915:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.234619140625	2	512.233853	1022.45315	-0.047414	-2.4287E-05	2.236	0.0011453	2.1885	0.001121	512.2348746592111	58.375	1.001	58.361	57.946	58.947	-0.013641					89	34	4	0	0	0	0.93293	1	5313	5313		51.335	12.083	1	1104700			2527	12588	1714	1716	2936	2936	163				-0.057175502455947935
ASCLLDLA	8	Unmodified	_ASCLLDLA_					0	0	0			REV__nc|ENSG00000104133|Q96JI7-2|SPG11	REV__nc|ENSG00000104133|Q96JI7-2|SPG11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2087707519531	2	403.209847	804.40514	-0.18721	-7.5483E-05	-1.9947	-0.00080429	-2.1819	-0.00087978	403.20895430476565	85.948	2.3712	86.015	85.029	87.4	0.067268					117	54	4	0	0	0	0.91005	1	8694	8694		42.474	0	1	1482400	+		2528	17438	1715	1717	2937	2937					-0.004886241656549828
ASCLPITT	8	Unmodified	_ASCLPITT_					0	0	0		ENSG00000056586|ENST00000357244|RC3H2	ENSG00000056586|ENST00000357244|RC3H2	ENSG00000056586|ENST00000357244|RC3H2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2091064453125	2	403.209847	804.40514	-1.8542	-0.00074762	-0.040711	-1.6415E-05	-1.8949	-0.00076404	403.2097445210388	85.667	2.0538	85.825	85.416	87.47	0.15851					103	47	4	0	0	0	0.884	1	8395	8395		33.516	5.2613	1	1256500			2529	1035	1716	1718	2938	2938					-0.004886241656663515
ASDDHCCQMQ	10	Unmodified	_ASDDHCCQMQ_					0	0	0		ENST00000545724.2_1_12:68718988-68726025:-|nuORF	ENST00000545724.2_1_12:68718988-68726025:-|nuORF	ENST00000545724.2_1_12:68718988-68726025:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.1890869140625	2	569.191533	1136.36851	0.071584	4.0745E-05	-3.6801	-0.0020947	-3.6085	-0.0020539	569.1893340514938	34.219	0.80494	34.222	33.918	34.723	0.0026054					45	17	4	0	0	0	0.87326	1	2075	2075		13.454	0.49486	1	240690			2530	13579	1717	1719	2939	2939					-0.19421612116161668
ASDFITKMDY	10	Unmodified	_ASDFITKMDY_					0	0	0		ENSG00000148180|ENST00000432226|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396|GSN;ENST00000373807.5_1_9:124074589-124093809:+|nuORF	ENSG00000148180|ENST00000432226|GSN	ENSG00000148180|ENST00000432226|GSN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	595.773193359375	2	595.773539	1189.53253	-0.59023	-0.00035165	0.093527	5.5721E-05	-0.49671	-0.00029592	595.7734997476008	61.184	0.2674	61.172	60.94	61.208	-0.012203					19	12	2	0	0	0	0.30286	1	5677	5677		72.243	30.817	1	343240			2531	4936	1718	1720	2940	2940					-0.05465948082132854
ASDFITKMDY	10	Unmodified	_ASDFITKMDY_					0	0	0		ENSG00000148180|ENST00000432226|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396|GSN;ENST00000373807.5_1_9:124074589-124093809:+|nuORF	ENSG00000148180|ENST00000432226|GSN	ENSG00000148180|ENST00000432226|GSN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	595.7743530273438	2	595.773539	1189.53253	0.65508	0.00039028	-1.4509	-0.00086442	-0.79583	-0.00047414	595.7725203729575	61.006	0.32545	60.973	60.747	61.072	-0.032509					19	12	2	0	0	0	0.20518	1	5772	5772		84.817	44.039	1	245730			2532	4936	1718	1720	2941	2941					-0.05465948082132854
ASDFITKMDY	10	Unmodified	_ASDFITKMDY_					0	0	0		ENSG00000148180|ENST00000432226|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396|GSN;ENST00000373807.5_1_9:124074589-124093809:+|nuORF	ENSG00000148180|ENST00000432226|GSN	ENSG00000148180|ENST00000432226|GSN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	595.7720336914062	2	595.773539	1189.53253	-2.3347	-0.001391	1.3959	0.00083167	-0.93877	-0.0005593	595.7742428980665	60.964	0.34229	60.996	60.741	61.083	0.0312					21	13	2	0	0	0	0.078892	1	5693	5693		104.42	56.766	1	312710			2533	4936	1718	1720	2942	2942					-0.05465948082132854
ASDFITKMDY	10	Oxidation (M)	_ASDFITKM(Oxidation (M))DY_		ASDFITKM(1)DY		ASDFITKM(50)DY	0	0	1		ENSG00000148180|ENST00000432226|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396|GSN;ENST00000373807.5_1_9:124074589-124093809:+|nuORF	ENSG00000148180|ENST00000432226|GSN	ENSG00000148180|ENST00000432226|GSN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	603.7706909179688	2	603.770997	1205.52744	-0.29468	-0.00017792	0.031936	1.9282E-05	-0.26275	-0.00015864	603.7710148662644	49.603	0.61957	49.579	49.191	49.811	-0.024033					24	13	2	0	0	0	0.60066	1	4257	4257		50.034	9.4609	1	125680			2534	4936	1718	1721	2943	2943		86			-0.06710251944741685
ASDFITKMDY	10	Oxidation (M)	_ASDFITKM(Oxidation (M))DY_					0	0	1		ENSG00000148180|ENST00000432226|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396|GSN;ENST00000373807.5_1_9:124074589-124093809:+|nuORF	ENSG00000148180|ENST00000432226|GSN	ENSG00000148180|ENST00000432226|GSN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	603.770997	1205.52744	-1.0223	-0.00061725	0.6801	0.00041062	-0.34223	-0.00020663	603.7712207444737	49.625	0.66382	49.629	49.235	49.899	0.0035973	0.054231	0.00043369	NaN	50.034	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104150			2535	4936	1718	1721				86			-0.06710251944741685
ASDGGDPPR	9	Unmodified	_ASDGGDPPR_					0	0	0		nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;ENSG00000253537|ENST00000518325|PCDHGA7	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.77471923828125	2	436.198856	870.383159	2.1883	0.00095455	4.3605	0.001902	6.5488	0.0028566	436.2016722234638	90.664	0.11679	90.71	90.634	90.751	0.04644					4	2	2	0	0	0	0.20789	1	9407	9407		16.473	0	1	20916			2536	8861	1719	1722	2944	2944					-0.05721712589854633
ASDGQKRKV	9	Unmodified	_ASDGQKRKV_					0	0	0			REV__ENST00000533135.1_1_11:117078559-117089797:-|nuORF	REV__ENST00000533135.1_1_11:117078559-117089797:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.2777404785156	2	494.780348	987.546142	-1.0197	-0.00050453	0.84608	0.00041862	-0.17362	-8.5904E-05	494.78063343938777	84.197	2.1372	84.197	83.134	85.271	0					93	51	2	0	0	0	0.78983	1	7876	7876		27.882	1.1893	1	184680	+		2537	28337	1720	1723	2945	2945					0.05187090532001548
ASFLKLPISGT	11	Unmodified	_ASFLKLPISGT_					0	0	0		ENSG00000144136|ENST00000272542|SLC20A1	ENSG00000144136|ENST00000272542|SLC20A1	ENSG00000144136|ENST00000272542|SLC20A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3310546875	2	567.331882	1132.64921	-1.3957	-0.00079181	-1.9666	-0.0011157	-3.3623	-0.0019075	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.72739	1	8821	8821		27.047	2.5281	1	5956400			2538	4693	1721	1724	2946	2946					0.08819158199935373
ASFLVVEGN	9	Unmodified	_ASFLVVEGN_					0	0	0			REV__ENST00000379477.5_1_13:41835935-41837507:-|nuORF	REV__ENST00000379477.5_1_13:41835935-41837507:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.244873046875	2	468.245275	934.475997	-0.1136	-5.3193E-05	-0.96692	-0.00045276	-1.0805	-0.00050595	468.2447176903105	105.86	1.9486	105.84	105.27	107.22	-0.025146					119	45	4	0	0	0	0.76764	1	11467	11467		34.173	0	1	1917000	+		2539	25921	1722	1725	2947	2947					0.006137921435197313
ASFVFGEKY	9	Unmodified	_ASFVFGEKY_					0	0	0		nc|ENSG00000197506|Q9HAS3-2|SLC28A3;ENSG00000197506|ENST00000376238|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2598876953125	2	524.260925	1046.5073	-0.088826	-4.6568E-05	-4.3789	-0.0022957	-4.4677	-0.0023423	524.2584805190936	44.67	0.72921	45.133	44.865	45.595	0.46313					31	17	3	0	0	0	0.18601	1	4103	4103		76.774	17.992	1	691240			2540	8171	1723	1726	2948	2948					-0.01409634822357475
ASGALRPW	8	Unmodified	_ASGALRPW_					0	0	0		ENST00000318782.8_1_16:3022603-3022840:+|nuORF	ENST00000318782.8_1_16:3022603-3022840:+|nuORF	ENST00000318782.8_1_16:3022603-3022840:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	429.2358703613281	2	429.235045	856.455536	-0.18423	-7.9079E-05	1.7315	0.00074323	1.5473	0.00066416	429.2356552162288	63.259	2.3661	63.225	62.64	65.006	-0.03371					245	81	5	0	0	0	0.87922	1	6040	6040		31.955	0	1	5881100			2541	10011	1724	1727	2949	2949					0.021566662743680354
ASGALRPW	8	Unmodified	_ASGALRPW_					0	0	0		ENST00000318782.8_1_16:3022603-3022840:+|nuORF	ENST00000318782.8_1_16:3022603-3022840:+|nuORF	ENST00000318782.8_1_16:3022603-3022840:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.2356872558594	2	429.235045	856.455536	-1.7002	-0.00072977	3.2929	0.0014134	1.5927	0.00068365	429.23632496484737	63.188	2.3667	63.302	62.678	65.045	0.11389					282	104	4	0	0	0	0.92457	1	5527	5527		47.916	12.715	1	6358600			2542	10011	1724	1727	2950	2950					0.021566662743680354
ASGDCIIKKLI	11	Unmodified	_ASGDCIIKKLI_					0	0	0			REV__ENST00000466459.5_1_7:112097053-112108063:+|nuORF	REV__ENST00000466459.5_1_7:112097053-112108063:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.8400268554688	2	580.839017	1159.66348	0.60129	0.00034925	1.964	0.0011407	2.5653	0.00149	580.839949137506	69.631	0.83281	69.76	69.457	70.29	0.1291					104	40	3	0	0	0	0.72106	1	6325	6325		28.081	0	1	14222000	+		2543	16108	1725	1728	2951	2951					0.09003487356608275
ASGEKQPWAE	10	Unmodified	_ASGEKQPWAE_					0	0	0		ENSG00000104888|ENST00000221485|SLC17A7;nc|ENSG00000104888|Q9P2U7-2|SLC17A7;nc|ENSG00000104888|Q9P2U7-3|SLC17A7	ENSG00000104888|ENST00000221485|SLC17A7	ENSG00000104888|ENST00000221485|SLC17A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.7618408203125	2	551.76182	1101.50909	0.61129	0.00033728	-0.40486	-0.00022339	0.20643	0.0001139	551.7614785938176	58.708	0.71088	58.677	58.367	59.078	-0.030888					47	23	3	0	0	0	0.8651	1	5490	5490		25.574	0	1	212330			2544	2162	1726	1729	2952	2952					-0.03760625804443407
ASGGTRNH	8	Unmodified	_ASGGTRNH_					0	0	0			REV__CON__P15636	REV__CON__P15636	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.1967468261719	2	400.193908	798.373263	0.91791	0.00036734	2.5215	0.0010091	3.4394	0.0013764	400.1951514766141	86.536	1.7122	86.462	86.013	87.725	-0.073769					84	39	4	0	0	0	0.87479	2	8921	8898;8921		47.916	1.9636	1	3325200	+	+	2545	15984	1727	1730	2953;2954	2954					-0.03398855804573486
ASGGTRNH	8	Unmodified	_ASGGTRNH_					0	0	0			REV__CON__P15636	REV__CON__P15636	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1963806152344	2	400.193908	798.373263	1.1195	0.00044802	1.6036	0.00064177	2.7232	0.0010898	400.194879000031	85.082	1.7417	85.522	85.026	86.768	0.43967					94	42	4	0	0	0	0.90465	1	9985	9985		40.573	3.4135	1	30482000	+	+	2546	15984	1727	1730	2955	2955					-0.03398855804573486
ASGGTRNH	8	Unmodified	_ASGGTRNH_					0	0	0			REV__CON__P15636	REV__CON__P15636	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.197021484375	2	400.193908	798.373263	-0.4695	-0.00018789	3.6706	0.001469	3.2011	0.0012811	400.1956755271944	85.113	2.0219	85.561	85.155	87.177	0.44736					102	49	4	0	0	0	0.91472	1	9923	9923		44.117	6.9577	1	34648000	+	+	2547	15984	1727	1730	2956	2956					-0.03398855804573486
ASGIPWRG	8	Unmodified	_ASGIPWRG_					0	0	0		ENST00000513440.5_1_4:56413129-56413264:-|nuORF	ENST00000513440.5_1_4:56413129-56413264:-|nuORF	ENST00000513440.5_1_4:56413129-56413264:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.2276306152344	2	422.22722	842.439886	1.5461	0.00065279	0.34016	0.00014362	1.8862	0.00079642	422.22724496849196	56.714	2.4167	56.747	56.356	58.772	0.033184					164	84	3	0	0	0	0.84341	1	5108	5108		24.203	2.5004	1	1096200			2548	13050	1728	1731	2957	2957					0.012363797573243573
ASGKMQGTLE	10	Unmodified	_ASGKMQGTLE_					0	0	0		ENSG00000264424|ENST00000255381|MYH4	ENSG00000264424|ENST00000255381|MYH4	ENSG00000264424|ENST00000255381|MYH4	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.25299072265625	2	511.252774	1020.491	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.547	1	78.547	78.047	79.047	0								0	0	0	0.45132	1	7189	7189		28.081	0.19925	1				2549	8943	1729	1732	2958	2958					-0.01843084050778998
ASGLRLGMP	9	Unmodified	_ASGLRLGMP_					0	0	0			REV__ENST00000367161.7_1_1:205156682-205156769:-|nuORF	REV__ENST00000367161.7_1_1:205156682-205156769:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.2483825683594	2	451.249837	900.485122	0.4368	0.00019711	-2.3688	-0.0010689	-1.932	-0.00087182	451.2486012382637	65.524	1.1913	65.65	65.09	66.281	0.12532					110	62	3	0	0	0	0.78536	1	5809	5809		29.15	2.3535	1	1138900	+		2550	25555	1730	1733	2959	2959					0.0308986222820522
ASGPFFGK	8	Unmodified	_ASGPFFGK_					0	0	0			REV__ENSG00000066135|ENST00000372396|KDM4A	REV__ENSG00000066135|ENST00000372396|KDM4A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5531311035156	2	405.710871	809.407189	0.37892	0.00015373	0.68263	0.00027695	1.0615	0.00043068	405.7107165921907	28.291	0.44613	28.194	28.011	28.458	-0.096945					17	10	3	0	0	0	0.4196	1	1721	1721		30.504	0.6621	1	58970	+		2551	16517	1731	1734	2960	2960					-0.005138273655120429
ASGPWIRG	8	Unmodified	_ASGPWIRG_					0	0	0		ENSG00000165526|ENST00000298317|RPUSD4;nc|ENSG00000165526|Q96CM3-2|RPUSD4	ENSG00000165526|ENST00000298317|RPUSD4	ENSG00000165526|ENST00000298317|RPUSD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.22802734375	2	422.22722	842.439886	-0.188	-7.9378E-05	2.0882	0.00088171	1.9002	0.00080234	422.22800326383765	64.571	1.1453	64.57	64.134	65.279	-0.00078583					74	34	3	0	0	0	0.89494	1	6038	6038		37.159	0	1	496030			2552	6092	1732	1735	2961	2961					0.012363797573243573
ASGPWIRG	8	Unmodified	_ASGPWIRG_					0	0	0		ENSG00000165526|ENST00000298317|RPUSD4;nc|ENSG00000165526|Q96CM3-2|RPUSD4	ENSG00000165526|ENST00000298317|RPUSD4	ENSG00000165526|ENST00000298317|RPUSD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2279357910156	2	422.22722	842.439886	0.40511	0.00017105	1.6054	0.00067786	2.0105	0.00084891	422.2277865836404	64.332	1.1229	64.456	64.031	65.154	0.12397					101	41	4	0	0	0	0.87922	1	5673	5673		31.955	0	1	502100			2553	6092	1732	1735	2962	2962					0.012363797573243573
ASHKACKL	8	Unmodified	_ASHKACKL_					0	0	0		nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA;ENST00000521080.5_1_8:95511544-95524374:-|nuORF	nc|ENSG00000164944|Q69YN4-2|VIRMA	nc|ENSG00000164944|Q69YN4-2|VIRMA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.2355041503906	2	429.23673	856.458907	0.92962	0.00039903	-3.3729	-0.0014478	-2.4433	-0.0010487	429.2351427168519	63.189	2.3191	63.218	62.635	64.954	0.028133					251	82	4	0	0	0	0.89962	1	5913	5913		38.806	1.7777	1	5799800			2554	6028	1733	1736	2963	2963					0.02493593056726695
ASHRRRRRRRR	11	Unmodified	_ASHRRRRRRRR_					0	0	0			REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	521.6569213867188	3	521.656445	1561.94751	0.011985	6.2519E-06	0.95178	0.0004965	0.96376	0.00050275	521.6568251732957	55.332	1.3019	55.36	54.888	56.19	0.027672					121	33	5	0	0	0	0.84494	1	4987	4987		6.3209	0.31984	1	1506400	+		2555	25399	1734	1737	2964	2964					0.18901111799300452
ASIKIRWKHSK	11	Unmodified	_ASIKIRWKHSK_					0	0	0		ENST00000588219.5_1_19:44732617-44738899:+|nuORF	ENST00000588219.5_1_19:44732617-44738899:+|nuORF	ENST00000588219.5_1_19:44732617-44738899:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.94305419921875	3	451.941973	1352.80409	0.3266	0.00014761	2.2075	0.00099765	2.5341	0.0011453	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.73647	2	4355	4322;4355		25.068	9.7303	1	721610			2556	14210	1735	1738	2965;2966	2966					0.1417982712500816
ASIKIRWKHSK	11	Unmodified	_ASIKIRWKHSK_					0	0	0		ENST00000588219.5_1_19:44732617-44738899:+|nuORF	ENST00000588219.5_1_19:44732617-44738899:+|nuORF	ENST00000588219.5_1_19:44732617-44738899:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.94317626953125	3	451.941973	1352.80409	-0.53385	-0.00024127	3.0718	0.0013883	2.538	0.001147	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.76384	1	4307	4307		18.966	2.4365	1	920720			2557	14210	1735	1738	2967	2967					0.1417982712500816
ASILVSPRKLR	11	Unmodified	_ASILVSPRKLR_					0	0	0			REV__ENSG00000171450|ENST00000302625|CDK5R2	REV__ENSG00000171450|ENST00000302625|CDK5R2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.9327697753906	3	413.934706	1238.78229	-1.8356	-0.0007598	-3.1712	-0.0013127	-5.0068	-0.0020725	413.93335322974514	43.048	2.0933	43.048	42.061	44.154	0					130	51	3	0	0	0	0.74405	1	3003	3003		23.378	4.8469	1	494810	+		2558	21728	1736	1739	2968	2968					0.1724502237645993
ASIPTHRLFVH	11	Unmodified	_ASIPTHRLFVH_					0	0	0		ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	639.35888671875	2	639.359296	1276.70404	2.7366	0.0017496	2.9999	0.001918	5.7365	0.0036677	639.3612614110287	110.74	0.74019	110.71	110.56	111.3	-0.026314					52	22	3	0	0	0	0.69995	1	12260	12260		31.53	2.3598	1	215130			2559	2713	1737	1740	2969	2969					0.07675589791188031
ASIPTHRLFVH	11	Unmodified	_ASIPTHRLFVH_					0	0	0		ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	639.359296	1276.70404	0.93847	0.00060002	4.2473	0.0027155	5.1857	0.0033155	639.3620049706543	110.42	0.40034	110.5	110.31	110.71	0.073685	-0.030168	0.00010384	NaN	31.53	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	350030			2560	2713	1737	1740							0.07675589791188031
ASIPTHRLFVH	11	Unmodified	_ASIPTHRLFVH_					0	0	0		ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	639.359296	1276.70404	-1.1618	-0.00074281	7.1025	0.0045411	5.9407	0.0037983	639.3636812549566	110.45	0.34657	110.44	110.31	110.66	-0.0074387	-0.082326	0.0037549	NaN	31.53	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125790			2561	2713	1737	1740							0.07675589791188031
ASIPTHRLFVH	11	Unmodified	_ASIPTHRLFVH_					0	0	0		ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	639.359296	1276.70404	2.1303	0.001362	2.9313	0.0018742	5.0616	0.0032362	639.361427088957	110.23	0.29942	110.29	110.14	110.43	0.054062	-0.24123	-0.0015789	NaN	31.53	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	352940			2562	2713	1737	1740							0.07675589791188031
ASIPTHRLFVH	11	Unmodified	_ASIPTHRLFVH_					0	0	0		ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	639.359296	1276.70404	6.9115	0.004419	-1.1634	-0.00074381	5.7482	0.0036751	639.3586364299821	110.18	0.33231	110.24	110.08	110.41	0.068001	-0.2841	-0.0068149	NaN	31.53	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	253790			2563	2713	1737	1740							0.07675589791188031
ASIQHLQEMD	10	Unmodified	_ASIQHLQEMD_					0	0	0		ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.426025390625	2	586.274238	1170.53392	-0.44293	-0.00025968	0.80395	0.00047133	0.36101	0.00021165	586.2746450033402	93.393	0.63866	93.843	93.524	94.163	0.44988					22	14	2	0	0	0	0.37624	1	11151	11151		44.377	24.38	1	194190			2564	1054	1738	1741	2970	2970					-0.044523139933517086
ASIVPTLLL	9	Unmodified	_ASIVPTLLL_					0	0	0			REV__nc|ENSG00000090889|O95239-2|KIF4A	REV__nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.80023193359375	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	2969	2969		16.473	0	1	1231300	+		2565	29725	1739	1742	2971	2971					0.11905003113827206
ASIVPTLLL	9	Unmodified	_ASIVPTLLL_					0	0	0			REV__nc|ENSG00000090889|O95239-2|KIF4A	REV__nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.8004455566406	2	463.799686	925.584819	-1.9529	-0.00090576	3.5624	0.0016523	1.6095	0.0007465	463.801178460678	42.067	1.8831	42.764	41.947	43.83	0.69754					154	47	4	0	0	0	0.7932	1	3699	3699		16.473	0	1	6253400	+		2566	29725	1739	1742	2972	2972					0.11905003113827206
ASKGKGLRG	9	Unmodified	_ASKGKGLRG_					0	0	0		ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2653503417969	2	437.266876	872.519199	-2.1128	-0.00092385	-0.58974	-0.00025787	-2.7025	-0.0011817	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.7932	1	777	777		17.365	2.7009	1	1366900			2567	2595	1740	1743	2973	2973					0.0778402671146523
ASKGKGLRG	9	Unmodified	_ASKGKGLRG_					0	0	0		ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26556396484375	2	437.266876	872.519199	1.7902	0.0007828	-4.1426	-0.0018114	-2.3524	-0.0010286	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.77244	2	726	726;747		32.812	3.6629	1	738160			2568	2595	1740	1743	2974;2975	2974					0.0778402671146523
ASKGRRSP	8	Unmodified	_ASKGRRSP_					0	0	0		ENSG00000095015|ENST00000399503|MAP3K1	ENSG00000095015|ENST00000399503|MAP3K1	ENSG00000095015|ENST00000399503|MAP3K1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.750732421875	2	429.74885	857.483148	1.5892	0.00068294	2.5388	0.001091	4.128	0.001774	429.74995933180253	34.855	1.9588	35.237	34.934	36.893	0.3812					144	49	4	0	0	0	0.93293	1	2731	2731		51.335	5.3632	1	5947200			2569	1717	1741	1744	2976	2976					0.04870569534602964
ASKIIKTD	8	Unmodified	_ASKIIKTD_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2638854980469	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.82658	1	3057	3057		21.96	1.9631	1	22029000			2570	1462	1742	1745	2977	2977					0.07010669040232642
ASKINTKI	8	Unmodified	_ASKINTKI_					0	0	0			REV__nc|ENSG00000159479|Q96G25-3|MED8	REV__nc|ENSG00000159479|Q96G25-3|MED8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7714538574219	2	437.77146	873.528367	-2.0028	-0.00087676	0.34136	0.00014944	-1.6614	-0.00072733	437.7717477191302	40.214	2.554	40.591	39.609	42.163	0.3765					138	67	4	0	0	0	0.83831	1	3391	3391		23.523	1.8204	1	10119000	+		2571	20664	1743	1746	2978	2978					0.08654375277126292
ASKKKKEKFVF	11	Unmodified	_ASKKKKEKFVF_					0	0	0			REV__ENSG00000112308|ENST00000378119|C6orf62	REV__ENSG00000112308|ENST00000378119|C6orf62	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2726745605469	3	447.274729	1338.80236	-1.2893	-0.00057667	-3.0438	-0.0013614	-4.3331	-0.0019381	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.74405	1	11455	11455		23.378	1.5975	1	31263000	+		2572	17940	1744	1747	2979	2979					0.14650773316384402
ASKKLLWAE	9	Unmodified	_ASKKLLWAE_					0	0	0		ENST00000286657.9_2_4:73434696-73434942:-|nuORF	ENST00000286657.9_2_4:73434696-73434942:-|nuORF	ENST00000286657.9_2_4:73434696-73434942:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3032836914062	2	523.305667	1044.59678	-0.041393	-2.1661E-05	-4.0495	-0.0021191	-4.0909	-0.0021408	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.77696	1	8649	8649		31.53	1.0262	1	3850300			2573	9655	1745	1748	2980	2980					0.0762661985700106
ASKKPWQG	8	Unmodified	_ASKKPWQG_					0	0	0			REV__ENST00000446498.1_1_1:26781156-26781564:-|nuORF	REV__ENST00000446498.1_1_1:26781156-26781564:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.24920654296875	2	451.248152	900.481751	-1.4974	-0.0006757	3.0718	0.0013862	1.5744	0.00071045	451.2494003851712	63.042	1.3844	63.429	62.881	64.266	0.38779					66	31	3	0	0	0	0.87064	1	6803	6803		29.15	2.3535	1	494160	+		2574	26807	1746	1749	2981	2981					0.02752935445857929
ASKKTARAAA	10	Unmodified	_ASKKTARAAA_					0	0	0		ENST00000454858.1_1_3:195281775-195281898:+|nuORF	ENST00000454858.1_1_3:195281775-195281898:+|nuORF	ENST00000454858.1_1_3:195281775-195281898:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7906494140625	2	487.790715	973.566878	-0.71211	-0.00034736	0.24728	0.00012062	-0.46484	-0.00022674	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.85834	1	7876	7876		22.58	0.87732	1	678280			2575	11947	1747	1750	2982	2982					0.07903680911636002
ASKLVVTK	8	Unmodified	_ASKLVVTK_					0	0	0		ENSG00000132716|ENST00000368074|DCAF8	ENSG00000132716|ENST00000368074|DCAF8	ENSG00000132716|ENST00000368074|DCAF8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.30010986328125	2	423.276378	844.538203	-0.95326	-0.00040349	-2.184	-0.00092442	-3.1372	-0.0013279	423.27537225044745	88.11	1.3252	88.574	88.143	89.469	0.46312					56	32	3	0	0	0	0.4196	1	10410	10410		42.396	15.703	1	363770			2576	3822	1748	1751	2983	2983					0.10971563282510033
ASKRPWRFL	9	Unmodified	_ASKRPWRFL_					0	0	0			REV__ENST00000394133.2_1_10:95043842-95044274:-|nuORF	REV__ENST00000394133.2_1_10:95043842-95044274:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.8416137695312	2	580.838	1159.66145	0.64193	0.00037286	3.7639	0.0021862	4.4058	0.0025591	580.8399997377094	69.658	0.88029	69.793	69.47	70.351	0.13506					122	43	4	0	0	0	0.7932	1	6335	6335		23.042	4.7181	1	14396000	+		2577	26074	1749	1752	2984	2984					0.08800239453648828
ASKRYLTKLST	11	Unmodified	_ASKRYLTKLST_					0	0	0			REV__nc|ENSG00000111912|Q8NI08-2|NCOA7	REV__nc|ENSG00000111912|Q8NI08-2|NCOA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3765869140625	2	634.372069	1266.72959	6.8438	0.0043415	0.99176	0.00062915	7.8355	0.0049706	634.3726570495403	111.53	0.41818	111.58	111.29	111.71	0.046539					29	15	2	0	0	0	0.7144	1	13508	13508		29.17	2.1227	1	6115700	+		2578	17906	1750	1753	2985	2985					0.10689019522965282
ASKRYLTKLST	11	Unmodified	_ASKRYLTKLST_					0	0	0			REV__nc|ENSG00000111912|Q8NI08-2|NCOA7	REV__nc|ENSG00000111912|Q8NI08-2|NCOA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3766479492188	2	634.372069	1266.72959	6.8506	0.0043458	0.67679	0.00042934	7.5274	0.0047751	634.3723115389404	111.82	0.6669	111.85	111.67	112.34	0.032715					57	24	4	0	0	0	0.74763	1	13552	13552		22.58	2.5829	1	3829000	+		2579	17906	1750	1753	2986	2986					0.10689019522965282
ASKRYLTKLST	11	Unmodified	_ASKRYLTKLST_					0	0	0			REV__nc|ENSG00000111912|Q8NI08-2|NCOA7	REV__nc|ENSG00000111912|Q8NI08-2|NCOA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3750610351562	2	634.372069	1266.72959	6.8434	0.0043413	1.2949	0.00082147	8.1384	0.0051628	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.7434	2	13722	13722;13805		23.523	1.5628	1	75725	+		2580	17906	1750	1753	2987;2988	2987					0.10689019522965282
ASKVEKLT	8	Unmodified	_ASKVEKLT_					0	0	0		ENSG00000072274|ENST00000360110|TFRC;chr3:196074125-196077064|44|10.11|0.63|4.01|-|ENST00000420415|TFRC,TFRC;ENST00000463356.5_1_3:195785139-195787086:-|nuORF	ENSG00000072274|ENST00000360110|TFRC	ENSG00000072274|ENST00000360110|TFRC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26318359375	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.86677	1	2324	2324		27.882	0	1	3507500			2581	399	1751	1754	2989	2989					0.07010669040232642
ASKVVTVF	8	Unmodified	_ASKVVTVF_					0	0	0		ENST00000515743.5_1_4:10078742-10093271:-|nuORF;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1;ENSG00000071127|ENST00000499869|WDR1	ENST00000515743.5_1_4:10078742-10093271:-|nuORF	ENST00000515743.5_1_4:10078742-10093271:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747497558594	2	425.755278	849.496004	0.41107	0.00017501	-1.5871	-0.0006757	-1.176	-0.00050069	425.7539745486435	37.636	0.72144	37.949	37.37	38.091	0.31312					29	17	3	0	0	0	0.4196	1	3025	3025		55.504	16.698	1	150730			2582	1256	1752	1755	2990	2990					0.06523587874153236
ASLAFADM	8	Unmodified	_ASLAFADM_					0	0	0		ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.19366455078125	2	413.194196	824.37384	-0.086313	-3.5664E-05	-2.3678	-0.00097836	-2.4541	-0.001014	413.1936016248627	77.941	2.7232	78.504	78.093	80.816	0.56332					177	64	5	0	0	0	0.86791	1	9030	9030		28.254	0	1	6380300			2583	2641	1753	1756	2991	2991					-0.0453719719973833
ASLLFSTT	8	Unmodified	_ASLLFSTT_					0	0	0			REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22698974609375	2	420.229094	838.443634	-1.3082	-0.00054975	-1.524	-0.00064043	-2.8322	-0.0011902	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.884	1	7426	7426		33.516	8.0654	1	419890	+		2584	28400	1754	1757	2992	2992					0.017950047405179248
ASLLFSTT	8	Unmodified	_ASLLFSTT_					0	0	0			REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2272644042969	2	420.229094	838.443634	-0.18765	-7.8855E-05	-2.6467	-0.0011122	-2.8344	-0.0011911	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.884	2	7774	7597;7774		40.573	5.3719	1	743780	+		2585	28400	1754	1757	2993;2994	2994					0.017950047405179248
ASLLFSTT	8	Unmodified	_ASLLFSTT_					0	0	0			REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2274475097656	2	420.229094	838.443634	0.089833	3.775E-05	-2.9174	-0.001226	-2.8276	-0.0011882	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.91005	1	7917	7917		42.474	0	1	888480	+		2586	28400	1754	1757	2995	2995					0.017950047405179248
ASLLFSTT	8	Unmodified	_ASLLFSTT_					0	0	0			REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2276916503906	2	420.229094	838.443634	0.53933	0.00022664	-3.4769	-0.0014611	-2.9375	-0.0012344	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.86791	1	7643	7643		28.254	4.0515	1	678130	+		2587	28400	1754	1757	2996	2996					0.017950047405179248
ASLLFSTT	8	Unmodified	_ASLLFSTT_					0	0	0			REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.2276916503906	2	420.229094	838.443634	0.39025	0.000164	-3.4243	-0.001439	-3.034	-0.001275	420.2275761359418	78.73	4.4768	79.141	77.509	81.986	0.4106					178	106	2	0	0	0	0.89962	1	9072	9072		38.806	3.6054	1	423290	+		2588	28400	1754	1757	2997	2997					0.017950047405179248
ASLLLPLVG	9	Unmodified	_ASLLLPLVG_					0	0	0			REV__ENSG00000080200|ENST00000389622|CRYBG3	REV__ENSG00000080200|ENST00000389622|CRYBG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7878112792969	2	441.786579	881.558604	-1.0238	-0.0004523	3.7443	0.0016542	2.7205	0.0012019	441.78803518939543	44.741	1.2608	45.205	44.578	45.839	0.46313					68	30	3	0	0	0	0.7932	1	4114	4114		25.45	6.0902	1	1232600	+		2589	16797	1755	1758	2998	2998					0.11308733942325944
ASLLLPSLL	9	Unmodified	_ASLLLPSLL_					0	0	0		ENST00000502843.5_1_4:15779904-15780093:+|nuORF	ENST00000502843.5_1_4:15779904-15780093:+|nuORF	ENST00000502843.5_1_4:15779904-15780093:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.8004150390625	2	463.799686	925.584819	-1.9529	-0.00090576	3.5624	0.0016523	1.6095	0.0007465	463.801178460678	42.067	1.8831	42.764	41.947	43.83	0.69754					154	47	4	0	0	0	0.7932	1	3687	3687		16.473	3.514	1	6253400			2590	12865	1756	1759	2999	2999					0.11905003113804469
ASLLPEDV	8	Unmodified	_ASLLPEDV_					0	0	0		ENST00000311956.8_1_11:46700251-46700590:-|nuORF	ENST00000311956.8_1_11:46700251-46700590:-|nuORF	ENST00000311956.8_1_11:46700251-46700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2278137207031	2	422.226551	842.438549	-0.93887	-0.00039642	3.7277	0.001574	2.7889	0.0011775	422.2280284167546	61.398	1.0667	61.414	61.239	62.306	0.015724					73	47	2	0	0	0	0.87922	1	5400	5400		31.955	0.37597	1	807210			2591	9935	1757	1760	3000	3000					0.011027008779024072
ASLLSLRTLS	10	Unmodified	_ASLLSLRTLS_					0	0	0			REV__ENST00000598563.5_1_19:39408497-39408710:-|nuORF	REV__ENST00000598563.5_1_19:39408497-39408710:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8206787109375	2	530.821681	1059.62881	0.66638	0.00035373	-1.9698	-0.0010456	-1.3034	-0.00069187	530.8204640085535	82.305	1.3281	82.45	81.982	83.31	0.14551					83	30	4	0	0	0	0.8545	1	7945	7945		36.447	2.2742	1	1921600	+		2592	29286	1758	1761	3001	3001					0.10137987540133508
ASLLVTLPI	9	Unmodified	_ASLLVTLPI_					0	0	0		ENSG00000132671|ENST00000255008|SSTR4	ENSG00000132671|ENST00000255008|SSTR4	ENSG00000132671|ENST00000255008|SSTR4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80078125	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3020	3020		16.473	0	1	890090			2593	3818	1759	1762	3002	3002					0.11905003113804469
ASLVARASLGT	11	Unmodified	_ASLVARASLGT_					0	0	0			REV__ENST00000570699.1_1_17:636236-644807:+|nuORF	REV__ENST00000570699.1_1_17:636236-644807:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303955078125	2	523.303655	1044.59276	1.0264	0.00053713	-1.3248	-0.00069329	-0.29841	-0.00015616	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.68532	1	8675	8675		33.922	1.1092	1	3817300	+		2594	28928	1760	1763	3003	3003					0.07224530363305348
ASLVARASLGT	11	Unmodified	_ASLVARASLGT_					0	0	0			REV__ENST00000570699.1_1_17:636236-644807:+|nuORF	REV__ENST00000570699.1_1_17:636236-644807:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3036499023438	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.6493	2	10357	10321;10357		38.754	3.1353	1	11944000	+		2595	28928	1760	1763	3004;3005	3005					0.07224530363305348
ASLVGQTSPK	10	Unmodified	_ASLVGQTSPK_					0	0	0		ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.2776794433594	2	494.277106	986.53966	-1.4854	-0.00073421	0.90629	0.00044796	-0.57913	-0.00028625	494.2776697703326	30.367	0.75211	30.395	29.964	30.716	0.028618					45	16	5	0	0	0	0.34592	2	1975	1975;1988		68.626	21.506	1	402990			2596	1023	1761	1764	3006;3007	3006					0.04585152580625618
ASLVGQTSPK	10	Unmodified	_ASLVGQTSPK_					0	0	0		ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.2776184082031	2	494.277106	986.53966	-0.091625	-4.5288E-05	0.062815	3.1048E-05	-0.028811	-1.424E-05	494.2769615841226	30.513	0.69884	30.517	30.229	30.928	0.0037193					31	15	3	0	0	0	0.22362	2	2007	2007;2017		81.525	21.594	1	453700			2597	1023	1761	1764	3008;3009	3008					0.04585152580625618
ASLVIFMQLR	10	Unmodified	_ASLVIFMQLR_					0	0	0		ENSG00000159461|ENST00000290649|AMFR;ENST00000492830.5_1_16:56419897-56437006:-|nuORF	ENSG00000159461|ENST00000290649|AMFR	ENSG00000159461|ENST00000290649|AMFR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3438720703125	2	589.341726	1176.6689	-0.3676	-0.00021664	2.4536	0.001446	2.086	0.0012294	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.86218	2	9549	9524;9549		32.812	1.2826	1	11103000			2598	5533	1762	1765	3010;3011	3011					0.08763210939059718
ASLVIFMQLR	10	Unmodified	_ASLVIFMQLR_					0	0	0		ENSG00000159461|ENST00000290649|AMFR;ENST00000492830.5_1_16:56419897-56437006:-|nuORF	ENSG00000159461|ENST00000290649|AMFR	ENSG00000159461|ENST00000290649|AMFR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3431396484375	2	589.341726	1176.6689	0.15554	9.1664E-05	1.9962	0.0011764	2.1517	0.0012681	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.8651	1	11493	11493		25.574	1.0549	1	10540000			2599	5533	1762	1765	3012	3012					0.08763210939059718
ASLVRRPT	8	Unmodified	_ASLVRRPT_					0	0	0			REV__chr7:158875082-158876609|13|15.38|0.21|6.19|+|1|TE_info:L2a,L2a_dup80656,L2,LINE,donor,+,158875022,158875082|None,DYNC2I1|1	REV__chr7:158875082-158876609|13|15.38|0.21|6.19|+|1|TE_info:L2a,L2a_dup80656,L2,LINE,donor,+,158875022,158875082|None,DYNC2I1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2743225097656	2	450.274701	898.534849	-1.7763	-0.00079984	1.0964	0.00049366	-0.67999	-0.00030618	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.89043	1	9345	9345		35.618	6.4687	1	35178000	+		2600	15905	1763	1766	3013	3013					0.08152313228526964
ASLVSTAQRI	10	Unmodified	_ASLVSTAQRI_					0	0	0		ENSG00000196417|ENST00000396408|ZNF765;ENSG00000160336|ENST00000684525|ZNF761	ENSG00000196417|ENST00000396408|ZNF765	ENSG00000196417|ENST00000396408|ZNF765	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035888671875	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.8545	1	8828	8828		36.447	3.6343	1	9288900			2601	5583	1764	1767	3014	3014					0.07224530363305348
ASLVSTAQRI	10	Unmodified	_ASLVSTAQRI_					0	0	0		ENSG00000196417|ENST00000396408|ZNF765;ENSG00000160336|ENST00000684525|ZNF761	ENSG00000196417|ENST00000396408|ZNF765	ENSG00000196417|ENST00000396408|ZNF765	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.85981	1	8571	8571		35.152	4.8343	1	3566700			2602	5583	1764	1767	3015	3015					0.07224530363305348
ASLVSTAQRI	10	Unmodified	_ASLVSTAQRI_					0	0	0		ENSG00000196417|ENST00000396408|ZNF765;ENSG00000160336|ENST00000684525|ZNF761	ENSG00000196417|ENST00000396408|ZNF765	ENSG00000196417|ENST00000396408|ZNF765	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.303466796875	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.86698	1	10573	10573		28.081	1.3886	1	11944000			2603	5583	1764	1767	3016	3016					0.07224530363305348
ASLVSTAQRI	10	Unmodified	_ASLVSTAQRI_					0	0	0		ENSG00000196417|ENST00000396408|ZNF765;ENSG00000160336|ENST00000684525|ZNF761	ENSG00000196417|ENST00000396408|ZNF765	ENSG00000196417|ENST00000396408|ZNF765	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3041381835938	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.8545	1	10861	10861		36.447	2.9312	1	13160000			2604	5583	1764	1767	3017	3017					0.07224530363305348
ASLVTIPLL	9	Unmodified	_ASLVTIPLL_					0	0	0			REV__ENST00000433117.6_1_22:39910519-39910582:+|nuORF	REV__ENST00000433117.6_1_22:39910519-39910582:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.80059814453125	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.7932	1	3723	3723		11.511	3.2797	1	5050800	+		2605	26645	1765	1768	3018	3018					0.11905003113804469
ASLVTIPLL	9	Unmodified	_ASLVTIPLL_					0	0	0			REV__ENST00000433117.6_1_22:39910519-39910582:+|nuORF	REV__ENST00000433117.6_1_22:39910519-39910582:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7995300292969	2	463.799686	925.584819	-1.7032	-0.00078997	2.9558	0.0013709	1.2525	0.00058091	463.8008996094523	40.729	0.89679	41.318	40.908	41.805	0.58916					67	25	3	0	0	0	0.7932	1	3556	3556		16.473	0	1	5530000	+		2606	26645	1765	1768	3019	3019					0.11905003113804469
ASLVVPSDI	9	Unmodified	_ASLVVPSDI_					0	0	0		ENSG00000075539|ENST00000358350|FRYL	ENSG00000075539|ENST00000358350|FRYL	ENSG00000075539|ENST00000358350|FRYL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7537536621094	2	450.755475	899.496398	-1.264	-0.00056978	-1.5875	-0.00071559	-2.8516	-0.0012854	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.62081	1	7514	7514		45.952	7.1458	1	414240			2607	1336	1766	1769	3020	3020					0.04262962803340997
ASMAAPRVV	9	Unmodified	_ASMAAPRVV_					0	0	0		ENST00000564003.5_1_15:75182396-75183760:+|nuORF	ENST00000564003.5_1_15:75182396-75183760:+|nuORF	ENST00000564003.5_1_15:75182396-75183760:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.24835205078125	2	451.249837	900.485122	0.1709	7.7119E-05	-2.215	-0.00099951	-2.0441	-0.0009224	451.24869628583264	62.968	1.2225	63.523	62.907	64.129	0.55449					64	28	3	0	0	0	0.78536	1	6802	6802		29.15	1.2673	1	464750			2608	13879	1767	1770	3021	3021					0.0308986222820522
ASNVTNKTD	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASNVTNKTD_					1	0	0		nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.2376403808594	2	496.238178	990.461803	-0.19806	-9.8285E-05	0.39232	0.00019468	0.19426	9.6399E-05	496.2381223206561	30.903	0.94662	30.856	30.347	31.293	-0.047064					49	24	3	0	0	0	0.51592	1	1703	1703		51.193	6.8155	1	221780			2609	1694	1768	1771	3022	3022					-0.033809050754143755
ASNVTNKTD	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASNVTNKTD_					1	0	0		nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	496.237548828125	2	496.238178	990.461803	-1.1591	-0.00057517	1.339	0.00066446	0.17994	8.9292E-05	496.238618590653	30.86	0.93819	30.85	30.405	31.344	-0.010656					47	23	4	0	0	0	0.30689	2	1642	1642;1649		64.207	14.766	1	242080			2610	1694	1768	1771	3023;3024	3023					-0.033809050754143755
ASNVTNKTD	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASNVTNKTD_					1	0	0		nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.23779296875	2	496.238178	990.461803	-1.3435	-0.00066668	1.2193	0.00060507	-0.12415	-6.161E-05	496.23868570674875	31.024	1.2712	31.103	30.457	31.728	0.079834					63	28	4	0	0	0	0.076066	3	2066	2055;2066;2078		98.582	28.871	1	1668700			2611	1694	1768	1771	3025;3026;3027	3026					-0.033809050754143755
ASNVTNKTD	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASNVTNKTD_					1	0	0		nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2378234863281	2	496.238178	990.461803	0.044181	2.1924E-05	-0.1185	-5.8803E-05	-0.074317	-3.6879E-05	496.23798670369024	31.087	1.204	31.091	30.623	31.827	0.0037212					56	27	4	0	0	0	0.045756	1	2096	2096		109.48	32.161	1	1990100			2612	1694	1768	1771	3028	3028					-0.033809050754143755
ASNVTNKTD	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASNVTNKTD_					1	0	0		nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	496.238178	990.461803	-0.68235	-0.00033861	0.89079	0.00044204	0.20844	0.00010344	496.23841813491765	30.93	0.46745	30.993	30.783	31.251	0.063122	0.095103	0.00032628	NaN	109.48	36	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130730			2613	1694	1768	1771							-0.033809050754143755
ASNVTNKTD	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASNVTNKTD_					1	0	0		nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	496.238178	990.461803	0.16684	8.2794E-05	-0.21806	-0.00010821	-0.051219	-2.5417E-05	496.2379691765779	30.659	0.53007	30.771	30.518	31.048	0.11198	-0.12778	-0.00077423	NaN	109.48	40	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128800			2614	1694	1768	1771							-0.033809050754143755
ASNVTNKTD	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASNVTNKTD_					1	0	0		nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	nc|ENSG00000092199|P07910-3|HNRNPC	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	496.238178	990.461803	0.40812	0.00020253	-0.44942	-0.00022302	-0.041297	-2.0493E-05	496.2379145076127	30.811	0.5335	30.809	30.524	31.057	-0.0022545	-0.08932	-0.0010038	NaN	109.48	44	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134440			2615	1694	1768	1771							-0.033809050754143755
ASPAGIRKN	9	Unmodified	_ASPAGIRKN_					0	0	0			REV__ENST00000484159.5_1_9:6434093-6493966:+|nuORF	REV__ENST00000484159.5_1_9:6434093-6493966:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2618103027344	2	457.264333	912.514114	-1.2803	-0.00058543	1.4305	0.00065413	0.15023	6.8693E-05	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.7932	1	7259	7259		21.96	1.013	1	812040	+		2616	20088	1769	1772	3029	3029					0.054357228488470355
ASPAGIRKN	9	Unmodified	_ASPAGIRKN_					0	0	0			REV__ENST00000484159.5_1_9:6434093-6493966:+|nuORF	REV__ENST00000484159.5_1_9:6434093-6493966:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2635192871094	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.78983	1	8448	8448		27.882	3.3631	1	4511100	+		2617	20088	1769	1772	3030	3030					0.054357228488470355
ASPAGIRKN	9	Unmodified	_ASPAGIRKN_					0	0	0			REV__ENST00000484159.5_1_9:6434093-6493966:+|nuORF	REV__ENST00000484159.5_1_9:6434093-6493966:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.263671875	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.78536	1	7820	7820		29.15	0	1	1458600	+		2618	20088	1769	1772	3031	3031					0.054357228488470355
ASPAGIRKN	9	Unmodified	_ASPAGIRKN_					0	0	0			REV__ENST00000484159.5_1_9:6434093-6493966:+|nuORF	REV__ENST00000484159.5_1_9:6434093-6493966:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2640380859375	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.67345	2	8244	8148;8244		42.396	5.237	1	4814400	+		2619	20088	1769	1772	3032;3033	3033					0.054357228488470355
ASPFLKVHK	9	Unmodified	_ASPFLKVHK_					0	0	0		ENST00000320631.7_1_11:64621709-64621808:-|nuORF	ENST00000320631.7_1_11:64621709-64621808:-|nuORF	ENST00000320631.7_1_11:64621709-64621808:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.80859375	2	513.808377	1025.6022	-0.47161	-0.00024232	1.6041	0.00082419	1.1325	0.00058187	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.7932	1	4111	4111		25.574	1.3713	1	1552900			2620	10029	1770	1773	3034	3034					0.0904234343945518
ASPFLKVHK	9	Unmodified	_ASPFLKVHK_					0	0	0		ENST00000320631.7_1_11:64621709-64621808:-|nuORF	ENST00000320631.7_1_11:64621709-64621808:-|nuORF	ENST00000320631.7_1_11:64621709-64621808:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.80859375	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.7932	1	3923	3923		26.693	3.6504	1	1550000			2621	10029	1770	1773	3035	3035					0.0904234343945518
ASPGGARGH	9	Unmodified	_ASPGGARGH_					0	0	0		nc|ENSG00000120885|P10909-2|CLU	nc|ENSG00000120885|P10909-2|CLU	nc|ENSG00000120885|P10909-2|CLU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.2026672363281	2	405.204276	808.393999	-0.0495	-2.0058E-05	1.1279	0.00045704	1.0784	0.00043698	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.7932	1	7673	7673		26.693	0	1	162370			2622	14876	1771	1774	3036	3036					-0.017862654249142906
ASPGWLGR	8	Unmodified	_ASPGWLGR_					0	0	0			REV__ENST00000263382.7_1_19:14231048-14231270:-|nuORF	REV__ENST00000263382.7_1_19:14231048-14231270:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.22723388671875	2	422.22722	842.439886	-0.74187	-0.00031324	2.4502	0.0010345	1.7083	0.00072129	422.22815757108447	56.228	1.1679	56.202	55.178	56.346	-0.026108					95	44	3	0	0	0	0.90465	1	4748	4748		40.573	0	1	764250	+		2623	24448	1772	1775	3037	3037					0.012363797573243573
ASPLFLHF	8	Unmodified	_ASPLFLHF_					0	0	0		nc|ENSG00000136205|Q68CZ2-2|TNS3;ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-4|TNS3;nc|ENSG00000136205|Q68CZ2-3|TNS3	nc|ENSG00000136205|Q68CZ2-2|TNS3	nc|ENSG00000136205|Q68CZ2-2|TNS3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2550964355469	2	466.255446	930.496338	-1.4812	-0.00069062	-1.4501	-0.00067613	-2.9313	-0.0013668	466.2546647596287	63.114	1.6104	63.114	62.32	63.93	0					124	75	2	0	0	0	0.86791	1	5501	5501		28.254	2.8041	1	225480			2624	4096	1773	1776	3038	3038					0.028310075939884882
ASPPVRRVRV	10	Unmodified	_ASPPVRRVRV_					0	0	0		nc|ENSG00000168807|Q13425-2|SNTB2;ENSG00000168807|ENST00000336278|SNTB2	nc|ENSG00000168807|Q13425-2|SNTB2	nc|ENSG00000168807|Q13425-2|SNTB2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8530883789062	2	568.854181	1135.69381	-0.36185	-0.00020584	-1.2386	-0.0007046	-1.6005	-0.00091044	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.85251	1	10883	10883		19.997	0	1	34546000			2625	6438	1774	1777	3039	3039					0.13139026856629243
ASPPVRRVRV	10	Unmodified	_ASPPVRRVRV_					0	0	0		nc|ENSG00000168807|Q13425-2|SNTB2;ENSG00000168807|ENST00000336278|SNTB2	nc|ENSG00000168807|Q13425-2|SNTB2	nc|ENSG00000168807|Q13425-2|SNTB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8530883789062	2	568.854181	1135.69381	0.52259	0.00029728	-2.4856	-0.0014139	-1.963	-0.0011166	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.8608	2	10788	10788;10837		34.173	3.6689	1	84800000			2626	6438	1774	1777	3040;3041	3040					0.13139026856629243
ASPPVVKLEVF	11	Unmodified	_ASPPVVKLEVF_					0	0	0		ENSG00000126821|ENST00000247225|SGPP1	ENSG00000126821|ENST00000247225|SGPP1	ENSG00000126821|ENST00000247225|SGPP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.343505859375	2	593.347532	1184.68051	-1.311	-0.00077786	-3.8239	-0.0022689	-5.1349	-0.0030468	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.7434	1	10956	10956		23.523	1.5628	1	3957400			2627	3472	1775	1778	3042	3042					0.09555731234036102
ASPQRFVP	8	Unmodified	_ASPQRFVP_					0	0	0		ENST00000538170.6_1_18:32621413-32677455:+|nuORF	ENST00000538170.6_1_18:32621413-32677455:+|nuORF	ENST00000538170.6_1_18:32621413-32677455:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.2500305175781	2	451.248152	900.481751	-0.97999	-0.00044222	2.5923	0.0011698	1.6123	0.00072755	451.24921015554173	65.724	1.4568	65.769	65.089	66.546	0.045113					104	74	2	0	0	0	0.81548	1	5827	5827		20.482	0	1	906430			2628	13460	1776	1779	3043	3043					0.02752935445857929
ASPRKTKSL	9	Unmodified	_ASPRKTKSL_					0	0	0		nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA;ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.2999572753906	2	494.300916	986.587279	-0.7737	-0.00038244	0.64363	0.00031815	-0.13007	-6.4295E-05	494.3011465997647	101.19	1.3573	101.19	100.82	102.17	0					71	32	4	0	0	0	0.78983	1	10297	10297		27.882	1.1893	1	465620			2629	4661	1777	1780	3044	3044					0.09344851571461277
ASPRKTKSL	9	Unmodified	_ASPRKTKSL_					0	0	0		nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA;ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.2987976074219	2	494.300916	986.587279	-0.75857	-0.00037496	2.5696	0.0012702	1.811	0.00089519	494.3025063263964	102.4	1.4235	102.4	101.53	102.96	0					71	35	3	0	0	0	0.20789	1	10344	10344		26.693	0	1	359110			2630	4661	1777	1780	3045	3045					0.09344851571461277
ASPRKTKSL	9	Unmodified	_ASPRKTKSL_					0	0	0		nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA;ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.30084228515625	2	494.300916	986.587279	2.3073	0.0011405	-2.72	-0.0013445	-0.41277	-0.00020403	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.67345	1	10420	10420		42.396	5.237	1	53958000			2631	4661	1777	1780	3046	3046					0.09344851571461277
ASPRKTKSL	9	Unmodified	_ASPRKTKSL_					0	0	0		nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA;ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.30084228515625	2	494.300916	986.587279	-0.67103	-0.00033169	0.2629	0.00012995	-0.40813	-0.00020174	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.64922	2	10517	10469;10517		44.117	3.6345	1	54981000			2632	4661	1777	1780	3047;3048	3048					0.09344851571461277
ASPRKTKSL	9	Unmodified	_ASPRKTKSL_					0	0	0		nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA;ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3009033203125	2	494.300916	986.587279	-0.58723	-0.00029027	0.13313	6.5808E-05	-0.4541	-0.00022446	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.76255	2	10318	10217;10318		35.618	2.3088	1	65263000			2633	4661	1777	1780	3049;3050	3050					0.09344851571461277
ASPRKTKSL	9	Unmodified	_ASPRKTKSL_					0	0	0		nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA;ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30108642578125	2	494.300916	986.587279	-0.58165	-0.00028751	0.50872	0.00025146	-0.072933	-3.6051E-05	494.30110008283356	100.79	1.5343	100.99	100.36	101.9	0.2058					82	36	3	0	0	0	0.76764	1	10540	10540		34.173	2.2177	1	820880			2634	4661	1777	1780	3051	3051					0.09344851571461277
ASPRKTKSL	9	Unmodified	_ASPRKTKSL_					0	0	0		nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA;ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3009338378906	2	494.300916	986.587279	0.76681	0.00037903	-1.1549	-0.00057088	-0.38812	-0.00019185	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.55097	1	10238	10238		49.442	10.189	1	52135000			2635	4661	1777	1780	3052	3052					0.09344851571461277
ASPRKTKSL	9	Unmodified	_ASPRKTKSL_					0	0	0		nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA;ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3006286621094	2	494.300916	986.587279	-1.6335	-0.00080746	1.1761	0.00058136	-0.4574	-0.0002261	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.64922	4	10263	9932;10118;10263;10298		44.117	7.723	1	46933000			2636	4661	1777	1780	3053;3054;3055;3056	3055					0.09344851571461277
ASPRKTKSL	9	Unmodified	_ASPRKTKSL_					0	0	0		nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA;ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.2999267578125	2	494.300916	986.587279	-1.6335	-0.00080746	1.3844	0.00068432	-0.24911	-0.00012313	494.30150238478427	100.99	1.3749	101.14	100.57	101.95	0.15505					78	33	3	0	0	0	0.74721	1	10544	10544		37.159	8.0096	1	773220			2637	4661	1777	1780	3057	3057					0.09344851571461277
ASPRKTKSL	9	Unmodified	_ASPRKTKSL_					0	0	0		nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA;ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.3008117675781	2	494.300916	986.587279	0.88078	0.00043537	-1.0905	-0.00053901	-0.20967	-0.00010364	494.3002880194073	97.072	3.8769	97.462	96.82	100.7	0.39066					309	95	6	0	0	0	0.66686	1	11766	11766		42.864	5.7052	1	27149000			2638	4661	1777	1780	3058	3058					0.09344851571461277
ASQKIVTK	8	Unmodified	_ASQKIVTK_					0	0	0			REV__nc|ENSG00000039319|Q7Z3T8-3|ZFYVE16	REV__nc|ENSG00000039319|Q7Z3T8-3|ZFYVE16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7712707519531	2	437.77146	873.528367	-0.10723	-4.6943E-05	-0.31102	-0.00013615	-0.41825	-0.0001831	437.7713100510169	39.948	1.5972	39.9	38.972	40.569	-0.04789					99	48	4	0	0	0	0.80308	1	2492	2492		16.473	3.0191	1	3032300	+		2639	16311	1778	1781	3059	3059					0.0865437527713766
ASQKRPLGG	9	Unmodified	_ASQKRPLGG_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2640380859375	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.77696	1	7726	7726		31.53	1.0262	1	2957200			2640	1560	1779	1782	3060	3060					0.05435722848869773
ASQKRPLGG	9	Unmodified	_ASQKRPLGG_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2640075683594	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.6204	1	8208	8208		45.972	3.5761	1	4511100			2641	1560	1779	1782	3061	3061					0.05435722848869773
ASQKRPLGG	9	Unmodified	_ASQKRPLGG_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2638244628906	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.77244	1	8032	8032		32.812	0.85756	1	4597500			2642	1560	1779	1782	3062	3062					0.05435722848869773
ASQKRPLGG	9	Unmodified	_ASQKRPLGG_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2640380859375	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.76764	2	9503	9503;9688		34.173	5.023	1	4402400			2643	1560	1779	1782	3063;3064	3063					0.05435722848869773
ASQLITIRVHK	11	Unmodified	_ASQLITIRVHK_					0	0	0			REV__ENSG00000186130|ENST00000373659|ZBTB6	REV__ENSG00000186130|ENST00000373659|ZBTB6	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.592041015625	3	422.594461	1264.76155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.201	1	53.198	52.698	53.698	-0.0033035								0	0	0	0.56276	1	4639	4639		21.78	0.94327	1		+		2644	22825	1780	1783	3065	3065					0.13976431996798055
ASQLITIRVHK	11	Unmodified	_ASQLITIRVHK_					0	0	0			REV__ENSG00000186130|ENST00000373659|ZBTB6	REV__ENSG00000186130|ENST00000373659|ZBTB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59283447265625	3	422.594461	1264.76155	-0.62547	-0.00026432	-2.6174	-0.0011061	-3.2429	-0.0013704	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.74405	1	4910	4910		23.378	3.3474	1	1069500	+		2645	22825	1780	1783	3066	3066					0.13976431996798055
ASQLITIRVHK	11	Unmodified	_ASQLITIRVHK_					0	0	0			REV__ENSG00000186130|ENST00000373659|ZBTB6	REV__ENSG00000186130|ENST00000373659|ZBTB6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.9266052246094	3	422.594461	1264.76155	-0.63509	-0.00026839	-3.8418	-0.0016235	-4.4769	-0.0018919	422.59269266623227	53.26	1.1275	53.198	52.52	53.647	-0.062061					70	30	3	0	0	0	0.74405	1	4308	4308		23.378	2.5408	1	161760	+		2646	22825	1780	1783	3067	3067					0.13976431996798055
ASQLTSLKKTT	11	Unmodified	_ASQLTSLKKTT_					0	0	0			REV__nc|ENSG00000118058|Q03164-2|KMT2A	REV__nc|ENSG00000118058|Q03164-2|KMT2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3431396484375	2	589.342978	1176.6714	-0.6745	-0.00039751	0.48348	0.00028493	-0.19103	-0.00011258	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.67778	1	10146	10146		35.152	8.4591	1	16185000	+		2647	18291	1781	1784	3068	3068					0.09013337877695449
ASQPLLRRRGR	11	Unmodified	_ASQPLLRRRGR_					0	0	0			REV__ENST00000282388.3_2_2:43451527-43452328:-|nuORF	REV__ENST00000282388.3_2_2:43451527-43452328:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2680969238281	3	437.268971	1308.78508	-1.7231	-0.00075344	-0.84838	-0.00037097	-2.5714	-0.0011244	437.26850375985913	50.916	1.5264	50.916	50.06	51.586	0					171	39	5	0	0	0	0.72374	1	4124	4124		27.644	10.927	1	3001200	+		2648	24613	1782	1785	3069	3069					0.14304290553968713
ASQPLLRRRGR	11	Unmodified	_ASQPLLRRRGR_					0	0	0			REV__ENST00000282388.3_2_2:43451527-43452328:-|nuORF	REV__ENST00000282388.3_2_2:43451527-43452328:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.267822265625	3	437.268971	1308.78508	1.089	0.00047619	-3.8083	-0.0016652	-2.7193	-0.001189	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.76892	1	4741	4741		17.833	1.3033	1	2745300	+		2649	24613	1782	1785	3070	3070					0.14304290553968713
ASQPLLRRRGR	11	Unmodified	_ASQPLLRRRGR_					0	0	0			REV__ENST00000282388.3_2_2:43451527-43452328:-|nuORF	REV__ENST00000282388.3_2_2:43451527-43452328:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26751708984375	3	437.268971	1308.78508	-1.5693	-0.00068621	-1.1187	-0.00048918	-2.688	-0.0011754	437.2683683670783	53.718	2.085	53.765	52.872	54.957	0.047806					225	71	5	0	0	0	0.75457	1	4433	4433		21.032	3.8655	1	2544700	+		2650	24613	1782	1785	3071	3071					0.14304290553968713
ASQPLLRRRGR	11	Unmodified	_ASQPLLRRRGR_					0	0	0			REV__ENST00000282388.3_2_2:43451527-43452328:-|nuORF	REV__ENST00000282388.3_2_2:43451527-43452328:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2677307128906	3	437.268971	1308.78508	0.28665	0.00012534	-2.7691	-0.0012109	-2.4825	-0.0010855	437.2676689275105	50.631	1.3868	50.681	50.015	51.402	0.049896					192	41	5	0	0	0	0.75121	1	4073	4073		21.78	2.5177	1	2963500	+		2651	24613	1782	1785	3072	3072					0.14304290553968713
ASQPLLRRRGR	11	Unmodified	_ASQPLLRRRGR_					0	0	0			REV__ENST00000282388.3_2_2:43451527-43452328:-|nuORF	REV__ENST00000282388.3_2_2:43451527-43452328:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2681884765625	3	437.268971	1308.78508	-1.0895	-0.00047642	-1.5359	-0.00067161	-2.6255	-0.001148	437.2682076309449	48.376	1.4718	48.845	48.119	49.591	0.46941					123	36	4	0	0	0	0.74771	1	4661	4661		22.562	1.5294	1	3096400	+		2652	24613	1782	1785	3073	3073					0.14304290553968713
ASRGLPWG	8	Unmodified	_ASRGLPWG_					0	0	0		ENST00000371417.3_1_9:140510343-140510466:-|nuORF	ENST00000371417.3_1_9:140510343-140510466:-|nuORF	ENST00000371417.3_1_9:140510343-140510466:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2295837402344	2	422.22722	842.439886	-0.15892	-6.7102E-05	1.6884	0.00071288	1.5295	0.00064578	422.2279069450433	56.51	0.46441	56.498	56.448	56.912	-0.012203					32	19	2	0	0	0	0.82658	1	5092	5092		21.96	2.5999	1	609110			2653	10664	1783	1786	3074	3074					0.012363797573243573
ASRGPGLW	8	Unmodified	_ASRGPGLW_					0	0	0		ENST00000291442.3_1_19:17342996-17343158:-|nuORF	ENST00000291442.3_1_19:17342996-17343158:-|nuORF	ENST00000291442.3_1_19:17342996-17343158:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2283630371094	2	422.22722	842.439886	-1.8139	-0.00076587	3.7149	0.0015685	1.9011	0.00080268	422.22869976881793	56.252	1.7834	56.323	54.854	56.638	0.071831					143	72	3	0	0	0	0.87064	1	4731	4731		29.15	1.2673	1	800100			2654	9682	1784	1787	3075	3075					0.012363797573243573
ASRHFHNK	8	Unmodified	_ASRHFHNK_					0	0	0			REV__nc|ENSG00000205277|Q9UKN1|MUC12	REV__nc|ENSG00000205277|Q9UKN1|MUC12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.8033447265625	2	498.759749	995.504946	0.36238	0.00018074	-1.373	-0.00068478	-1.0106	-0.00050404	498.759157217304	52.084	0.45482	52.144	51.894	52.349	0.059719					21	13	2	0	0	0	0.4196	1	4198	4198		57.811	28.662	1	89019	+		2655	30170	1785	1788	3076	3076					0.007013742831759373
ASRLAESN	8	Unmodified	_ASRLAESN_					0	0	0			REV__ENSG00000064989|ENST00000392370|CALCRL	REV__ENSG00000064989|ENST00000392370|CALCRL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.2186279296875	2	424.217049	846.419545	-0.1837	-7.7928E-05	3.6063	0.0015299	3.4226	0.0014519	424.2185287134354	101.66	1.8082	101.68	101.04	102.85	0.01989					87	43	4	0	0	0	0.87792	1	10900	10900		31.53	2.3803	1	1878300	+		2656	16487	1786	1789	3077	3077					-0.009808356931443996
ASRLWPLREGP	11	Unmodified	_ASRLWPLREGP_					0	0	0		ENST00000575427.1_1_17:7306368-7306464:-|nuORF	ENST00000575427.1_1_17:7306368-7306464:-|nuORF	ENST00000575427.1_1_17:7306368-7306464:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.85986328125	2	641.356754	1280.69895	2.1015	0.0013478	-2.0497	-0.0013146	0.051767	3.3201E-05	641.8572268612736	114.29	2.4777	114.3	113.86	116.34	0.0094528					148	121	2	0	0	0	0.7434	1	13957	13957		23.523	0.94304	1	210520			2657	14050	1787	1790	3078	3078					0.06983285928595251
ASSGKSSVC	9	Unmodified	_ASSGKSSVC_					0	0	0			REV__ENSG00000122547|ENST00000242108|EEPD1	REV__ENSG00000122547|ENST00000242108|EEPD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.19378662109375	2	413.192185	824.369817	-0.086314	-3.5664E-05	2.5001	0.001033	2.4138	0.00099735	413.1936016248627	77.941	2.7232	78.504	78.093	80.816	0.56332					177	64	5	0	0	0	0.71772	1	9006	9006		39.253	10.999	1	6380300	+		2658	18503	1788	1791	3079	3079					-0.04939286693456779
ASSGTYIGDL	10	Unmodified	_ASSGTYIGDL_					0	0	0			REV__nc|ENSG00000042781|O75445-3|USH2A	REV__nc|ENSG00000042781|O75445-3|USH2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.795654296875	2	492.237647	982.460741	-0.75717	-0.00037271	1.5697	0.00077265	0.8125	0.00039994	492.23838608949114	45.6	0.43849	46.495	46.129	46.567	0.89542					15	10	2	0	0	0	0.37624	1	4219	4219		32.812	16.107	1	177710	+		2659	16330	1789	1792	3080	3080					-0.03119119444329499
ASSGWPGGR	9	Unmodified	_ASSGWPGGR_					0	0	0			REV__ENST00000464088.5_1_1:117087172-117113587:-|nuORF	REV__ENST00000464088.5_1_1:117087172-117113587:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2679748535156	2	437.711934	873.409314	-0.43029	-0.00018834	-1.434	-0.00062767	-1.8643	-0.00081602	437.7114129554668	49.315	0.86082	49.775	49.459	50.32	0.45983					25	20	2	0	0	0	0.20789	1	4824	4824		35.618	0	1	97544	+		2660	27087	1790	1793	3081	3081					-0.03245398627711893
ASSIATVFPKL	11	Unmodified	_ASSIATVFPKL_					0	0	0			REV__nc|ENSG00000141556|Q9BTW9-5|TBCD	REV__nc|ENSG00000141556|Q9BTW9-5|TBCD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3302612304688	2	567.331882	1132.64921	1.2029	0.00068247	-3.4414	-0.0019524	-2.2385	-0.00127	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.75164	1	10586	10586		21.686	0.73882	1	4990000	+		2661	19695	1791	1794	3082	3082					0.0881915819995811
ASSLGLFST	9	Unmodified	_ASSLGLFST_					0	0	0		ENSG00000121039|ENST00000240285|RDH10	ENSG00000121039|ENST00000240285|RDH10	ENSG00000121039|ENST00000240285|RDH10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7879943847656	2	441.732	881.449448	-0.36739	-0.00016229	-1.409	-0.00062239	-1.7764	-0.00078467	441.7315646212372	37.797	0.1825	38.11	37.98	38.163	0.31312					6	4	2	0	0	0	0.20789	1	3055	3055		21.96	8.1846	1	41054			2662	3161	1792	1795	3083	3083					0.0039810325220059894
ASSLIPLLL	9	Unmodified	_ASSLIPLLL_					0	0	0			REV__ENSG00000162733|ENST00000367921|DDR2	REV__ENSG00000162733|ENST00000367921|DDR2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80047607421875	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3270	3270		19.36	1.0356	1	890090	+		2663	20842	1793	1796	3084	3084					0.11905003113804469
ASSLIPLLL	9	Unmodified	_ASSLIPLLL_					0	0	0			REV__ENSG00000162733|ENST00000367921|DDR2	REV__ENSG00000162733|ENST00000367921|DDR2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8007507324219	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.7932	1	3383	3383		12.959	0.75233	1	279560	+		2664	20842	1793	1796	3085	3085					0.11905003113804469
ASSLVPHVW	9	Unmodified	_ASSLVPHVW_					0	0	0		ENST00000392547.6_1_2:175427025-175427217:-|nuORF	ENST00000392547.6_1_2:175427025-175427217:-|nuORF	ENST00000392547.6_1_2:175427025-175427217:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.27008056640625	2	498.269084	994.523616	0.24388	0.00012152	3.5149	0.0017514	3.7588	0.0018729	498.2703144125386	38.968	1.0565	39.056	38.555	39.611	0.088375					41	29	2	0	0	0	0.7932	1	2295	2295		25.45	1.2474	1	122500			2665	11026	1794	1797	3086	3086					0.02613491134366086
ASSRRVRQS	9	Unmodified	_ASSRRVRQS_					0	0	0			REV__ENST00000318782.8_1_16:3019515-3019740:+|nuORF	REV__ENST00000318782.8_1_16:3019515-3019740:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.7927856445312	2	523.794321	1045.57409	0.099108	5.1912E-05	-0.97977	-0.0005132	-0.88066	-0.00046128	523.7937036505126	19.091	1.2071	19.017	18.843	20.05	-0.073702					63	35	3	0	0	0	0.7932	1	391	391		19.997	0.6368	1	115810	+		2666	24978	1795	1798	3087	3087					0.05312413512092462
ASSTSSVIL	9	Unmodified	_ASSTSSVIL_					0	0	0		ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.22222900390625	2	432.737283	863.460012	-0.91883	-0.00039761	2.0601	0.00089148	1.1413	0.00049387	432.73970322951124	39.201	0.7816	39.755	39.401	40.183	0.55449					16	17	2	0	0	0	0.20789	1	3319	3319		29.15	4.9468	1	52084			2667	11082	1796	1799	3088	3088					0.022820859066200683
ASSTSSVIL	9	Unmodified	_ASSTSSVIL_					0	0	0		ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	432.737283	863.460012	-1.8926	-0.00081898	5.3557	0.0023176	3.4632	0.0014987	432.7395910707115	39.274	1.7468	39.274	38.225	39.972	0	-0.17333	0.0009701	NaN	29.15	62	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46735			2668	11082	1796	1799							0.022820859066200683
ASSTSSVIL	9	Unmodified	_ASSTSSVIL_					0	0	0		ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	432.737283	863.460012	0.08898	3.8505E-05	3.8602	0.0016704	3.9491	0.0017089	432.73886036026244	39.611	1.4687	39.581	38.296	39.765	-0.03027	0.13356	-0.0003243	NaN	29.15	43	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59747			2669	11082	1796	1799							0.022820859066200683
ASSTSSVIL	9	Unmodified	_ASSTSSVIL_					0	0	0		ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	432.737283	863.460012	-1.3127	-0.00056806	4.897	0.0021191	3.5843	0.0015511	432.73940412948315	39.42	2.0593	39.373	38.12	40.179	-0.047001	-0.074825	0.00057307	NaN	29.15	71	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67479			2670	11082	1796	1799							0.022820859066200683
ASSTSSVIL	9	Unmodified	_ASSTSSVIL_					0	0	0		ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	432.737283	863.460012	0.10014	4.3334E-05	3.4365	0.0014871	3.5366	0.0015304	432.7386931739803	39.397	2.0321	39.408	38.207	40.239	0.011173	-0.03943	-0.00069096	NaN	29.15	59	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89445			2671	11082	1796	1799							0.022820859066200683
ASSTSSVIL	9	Unmodified	_ASSTSSVIL_					0	0	0		ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	432.737283	863.460012	-1.6835	-0.00072849	5.5928	0.0024202	3.9094	0.0016917	432.7397446100551	39.455	1.0972	39.466	38.658	39.755	0.010708	0.01819	0.0011753	NaN	29.15	38	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97111			2672	11082	1796	1799							0.022820859066200683
ASSTSSVIL	9	Unmodified	_ASSTSSVIL_					0	0	0		ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	432.737283	863.460012	0.17963	7.7734E-05	3.8573	0.0016692	4.037	0.0017469	432.7389775526737	39.349	1.1277	39.438	38.525	39.652	0.088375	-0.0099163	-0.00032674	NaN	29.15	37	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122370			2673	11082	1796	1799							0.022820859066200683
ASSTSSVIL	9	Unmodified	_ASSTSSVIL_					0	0	0		ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	ENST00000394951.5_1_16:31123602-31123854:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	432.737283	863.460012	-0.10003	-4.3288E-05	3.8757	0.0016772	3.7757	0.0016339	432.73901187244707	39.339	0.92409	39.286	38.637	39.561	-0.052731	-0.16182	-0.00031085	NaN	29.15	37	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106920			2674	11082	1796	1799							0.022820859066200683
ASTLVLLPL	9	Unmodified	_ASTLVLLPL_					0	0	0			REV__ENST00000416860.2_2_1:2486942-2487152:-|nuORF	REV__ENST00000416860.2_2_1:2486942-2487152:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.79986572265625	2	463.799686	925.584819	0.23374	0.00010841	1.7317	0.00080317	1.9655	0.00091158	463.8003055874184	41.421	1.4891	41.495	41.009	42.498	0.073418					84	40	3	0	0	0	0.7932	1	2735	2735		18.324	0.95945	1	378670	+		2675	26439	1797	1800	3089	3089					0.11905003113804469
ASTLVLLPL	9	Unmodified	_ASTLVLLPL_					0	0	0			REV__ENST00000416860.2_2_1:2486942-2487152:-|nuORF	REV__ENST00000416860.2_2_1:2486942-2487152:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8019714355469	2	463.799686	925.584819	-0.24475	-0.00011352	3.0643	0.0014212	2.8195	0.0013077	463.8008545525102	46.185	0.71794	46.106	45.759	46.477	-0.079006					36	20	2	0	0	0	0.7932	1	3383	3383		11.511	1.2458	1	192340	+		2676	26439	1797	1800	3090	3090					0.11905003113804469
ASTSTTIRSH	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASTSTTIRSH_					1	0	0		ENSG00000205420|ENST00000330722|KRT6A;ENSG00000185479|ENST00000252252|KRT6B;ENSG00000170465|ENST00000252250|KRT6C;CON__P48668;CON__P04259;CON__P02538	ENSG00000205420|ENST00000330722|KRT6A	ENSG00000205420|ENST00000330722|KRT6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.7782592773438	2	551.778002	1101.54145	-0.32157	-0.00017743	0.63954	0.00035288	0.31798	0.00017545	551.7780212693134	30.336	0.54678	30.361	30.135	30.681	0.025013					23	14	2	0	0	0	0.74383	1	1560	1560		42.338	7.1861	1	84239		+	2677	580	1798	1801	3091	3091					-0.005258384014268813
ASTSTTIRSH	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASTSTTIRSH_					1	0	0		ENSG00000205420|ENST00000330722|KRT6A;ENSG00000185479|ENST00000252252|KRT6B;ENSG00000170465|ENST00000252250|KRT6C;CON__P48668;CON__P04259;CON__P02538	ENSG00000205420|ENST00000330722|KRT6A	ENSG00000205420|ENST00000330722|KRT6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.777587890625	2	551.778002	1101.54145	0.77112	0.00042549	-0.026324	-1.4525E-05	0.7448	0.00041096	551.7773819026168	30.418	0.49939	30.403	30.164	30.663	-0.015167					22	12	2	0	0	0	0.50904	1	1594	1594		55.084	15.831	1	79494		+	2678	580	1798	1801	3092	3092					-0.005258384014268813
ASTSTTIRSH	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ASTSTTIRSH_					1	0	0		ENSG00000205420|ENST00000330722|KRT6A;ENSG00000185479|ENST00000252252|KRT6B;ENSG00000170465|ENST00000252250|KRT6C;CON__P48668;CON__P04259;CON__P02538	ENSG00000205420|ENST00000330722|KRT6A	ENSG00000205420|ENST00000330722|KRT6A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	551.778002	1101.54145	-0.019289	-1.0644E-05	-1.1303	-0.00062368	-1.1496	-0.00063433	551.777503456097	30.534	0.26262	30.538	30.404	30.667	0.0037212	0.096968	-0.0016732	NaN	55.084	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51316		+	2679	580	1798	1801							-0.005258384014268813
ASTTTLPPTT	10	Unmodified	_ASTTTLPPTT_					0	0	0		nc|ENSG00000198788|Q02817|MUC2	nc|ENSG00000198788|Q02817|MUC2	nc|ENSG00000198788|Q02817|MUC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2582092285156	2	495.261122	988.507691	-2.6631	-0.0013189	-1.4049	-0.00069578	-4.068	-0.0020147	495.26028573461133	40.858	1.9733	41.25	40.867	42.841	0.39209					105	53	3	0	0	0	0.86763	1	3566	3566		26.693	0	1	8396000			2680	15201	1799	1802	3093	3093					0.012977401068042127
ASVARPGW	8	Unmodified	_ASVARPGW_					0	0	0			REV__ENST00000354921.7_1_1:177913774-177917075:-|nuORF	REV__ENST00000354921.7_1_1:177913774-177917075:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.22735595703125	2	422.22722	842.439886	-1.5313	-0.00064655	3.5232	0.0014876	1.9919	0.00084104	422.228628241818	64.101	0.62197	64.101	63.67	64.292	0					53	29	2	0	0	0	0.87064	1	5635	5635		29.15	2.4566	1	218720	+		2681	25365	1800	1803	3094	3094					0.012363797573243573
ASVIKRRP	8	Unmodified	_ASVIKRRP_					0	0	0		ENST00000225873.8_2_17:33905416-33905620:-|nuORF	ENST00000225873.8_2_17:33905416-33905620:-|nuORF	ENST00000225873.8_2_17:33905416-33905620:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8006591796875	2	463.798343	925.582134	0.28206	0.00013082	4.2188	0.0019567	4.5009	0.0020875	463.8001612881591	41.523	1.5134	41.492	41.236	42.75	-0.030991					87	37	3	0	0	0	0.83058	1	3142	3142		12.959	0.75233	1	527400			2682	9191	1801	1804	3095	3095					0.1163659249950797
ASVIYLKPKS	10	Unmodified	_ASVIYLKPKS_					0	0	0		ENSG00000186723|ENST00000641419|OR10H1	ENSG00000186723|ENST00000641419|OR10H1	ENSG00000186723|ENST00000641419|OR10H1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.33251953125	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.82886	1	9724	9724		37.812	4.9991	1	2365500			2683	7815	1802	1805	3096	3096					0.10615462062582992
ASVKCAHK	8	Unmodified	_ASVKCAHK_					0	0	0			REV__ENST00000581424.1_1_17:61228485-61228857:+|nuORF	REV__ENST00000581424.1_1_17:61228485-61228857:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.22772216796875	2	422.228905	842.443257	-0.18805	-7.94E-05	-1.9096	-0.00080628	-2.0976	-0.00088568	422.2279917800992	63.929	0.72619	63.928	63.441	64.167	-0.00078583					51	28	3	0	0	0	0.87922	1	5952	5952		31.955	2.8053	1	195170	+		2684	29050	1803	1806	3097	3097					0.015733065396716484
ASVKCAHK	8	Unmodified	_ASVKCAHK_					0	0	0			REV__ENST00000581424.1_1_17:61228485-61228857:+|nuORF	REV__ENST00000581424.1_1_17:61228485-61228857:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.22625732421875	2	422.228905	842.443257	-0.032306	-1.364E-05	-2.6521	-0.0011198	-2.6844	-0.0011334	422.2276832627875	61.725	1.2193	61.692	61.376	62.595	-0.033173					71	53	2	0	0	0	0.86677	1	5831	5831		27.882	1.0861	1	435140	+		2685	29050	1803	1806	3098	3098					0.015733065396716484
ASVKCAHK	8	Unmodified	_ASVKCAHK_					0	0	0			REV__ENST00000581424.1_1_17:61228485-61228857:+|nuORF	REV__ENST00000581424.1_1_17:61228485-61228857:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2283020019531	2	422.228905	842.443257	-1.8115	-0.00076488	-0.36746	-0.00015515	-2.179	-0.00092003	422.2286507629438	57.274	2.0296	57.354	56.645	58.675	0.079643					188	95	3	0	0	0	0.8347	1	4864	4864		23.042	1.3402	1	748250	+		2686	29050	1803	1806	3099	3099					0.015733065396716484
ASVKCAHK	8	Unmodified	_ASVKCAHK_					0	0	0			REV__ENST00000581424.1_1_17:61228485-61228857:+|nuORF	REV__ENST00000581424.1_1_17:61228485-61228857:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.22979736328125	2	422.228905	842.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.69	1	61.797	61.297	62.297	0.10743								0	0	0	0.2939	1	5362	5362		27.882	2.4321	1		+		2687	29050	1803	1806	3100	3100					0.015733065396716484
ASVLGPRR	8	Unmodified	_ASVLGPRR_					0	0	0		ENSG00000100985|ENST00000372330|MMP9	ENSG00000100985|ENST00000372330|MMP9	ENSG00000100985|ENST00000372330|MMP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.26165771484375	2	428.261594	854.508634	-1.6655	-0.00071328	1.873	0.00080211	0.20742	8.8832E-05	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.89494	1	9100	9100		37.159	1.9584	1	44776000			2688	1889	1804	1807	3101	3101					0.0755604405703707
ASVLLPLY	8	Unmodified	_ASVLLPLY_					0	0	0			REV__ENSG00000187688|ENST00000338560|TRPV2	REV__ENSG00000187688|ENST00000338560|TRPV2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2620544433594	2	438.265479	874.516405	-1.5746	-0.00069011	-4.2502	-0.0018627	-5.8249	-0.0025528	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.87276	1	3024	3024		29.842	0.69198	1	22924000	+		2689	22932	1805	1808	3102	3102					0.07412758533951092
ASVLRLVSSSA	11	Unmodified	_ASVLRLVSSSA_					0	0	0		ENST00000265062.7_1_3:128445042-128514207:+|nuORF	ENST00000265062.7_1_3:128445042-128514207:+|nuORF	ENST00000265062.7_1_3:128445042-128514207:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3173217773438	2	545.316763	1088.61897	-0.0069207	-3.774E-06	0.033442	1.8237E-05	0.026521	1.4463E-05	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.53361	1	10316	10316		49.536	8.1094	1	4868200			2690	9495	1806	1809	3103	3103					0.07820799534761136
ASVLRREI	8	Unmodified	_ASVLRREI_					0	0	0		ENSG00000154814|ENST00000285083|OXNAD1	ENSG00000154814|ENST00000285083|OXNAD1	ENSG00000154814|ENST00000285083|OXNAD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2874755859375	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.88601	1	9721	9721		34.173	2.6427	1	48696000			2691	5298	1807	1810	3104	3104					0.08748582399982752
ASVLVAIVP	9	Unmodified	_ASVLVAIVP_					0	0	0			REV__ENST00000541712.5_1_12:123343395-123344723:+|nuORF	REV__ENST00000541712.5_1_12:123343395-123344723:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.7932	1	2361	2361		23.042	1.3402	1	2486400	+		2692	28488	1808	1811	3105	3105					0.10388447425282266
ASWPLARG	8	Unmodified	_ASWPLARG_					0	0	0		ENSG00000009830|ENST00000261534|POMT2	ENSG00000009830|ENST00000261534|POMT2	ENSG00000009830|ENST00000261534|POMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	429.2356262207031	2	429.235045	856.455536	-0.18423	-7.9079E-05	1.7315	0.00074323	1.5473	0.00066416	429.2356552162288	63.259	2.3661	63.225	62.64	65.006	-0.03371					245	81	5	0	0	0	0.87922	1	6004	6004		31.955	3.7006	1	5881100			2693	757	1809	1812	3106	3106					0.02156666274379404
ASYGVSKGK	9	Unmodified	_ASYGVSKGK_					0	0	0		ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.7467346191406	2	448.745442	895.476331	0.29395	0.00013191	-0.13503	-6.0595E-05	0.15892	7.1313E-05	448.74523337437955	18.06	0.50177	17.438	17.265	17.767	-0.62141					26	10	4	0	0	0	0.36616	1	338	338		60.118	4.6141	1	569890			2694	5219	1810	1813	3107	3107					0.024412118633904356
ASYGVSKGK	9	Unmodified	_ASYGVSKGK_					0	0	0		ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	448.745442	895.476331	-0.10547	-4.7331E-05	0.31823	0.0001428	0.21275	9.5472E-05	448.74540878807505	17.925	0.55865	17.442	17.279	17.838	-0.48256	0.0019796	0.00022246	NaN	60.118	27	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	579020			2695	5219	1810	1813							0.024412118633904356
ATAARARRYVQ	11	Unmodified	_ATAARARRYVQ_					0	0	0		ENST00000352480.9_1_9:133320329-133327701:+|nuORF	ENST00000352480.9_1_9:133320329-133327701:+|nuORF	ENST00000352480.9_1_9:133320329-133327701:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.6872863769531	3	421.57406	1261.70035	2.6263	0.0011072	-0.26122	-0.00011012	2.3651	0.00099706	421.57387911137397	28.574	0.39856	28.555	28.398	28.796	-0.019405					13	9	2	0	0	0	0.17245	1	1371	1371		26.75	16.646	1	14062			2696	10326	1811	1814	3108	3108					0.07996920017353659
ATAASSSSLEK	11	Unmodified	_ATAASSSSLEK_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2	ENSG00000075624|ENST00000646664|ACTB;ENSG00000159251|ENST00000290378|ACTC1	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2674560546875	2	526.266936	1050.51932	1.1325	0.00059601	-1.332	-0.000701	-0.19951	-0.000105	526.2662002748589	23.412	0.60332	23.03	22.762	23.365	-0.38178					30	13	3	0	0	0	0.41445	2	1038	1027;1038		58.246	14.129	1	214500			2697	1338;2370	1812	1815	3109;3110	3110					-0.003920628698551809
ATAASSSSLEK	11	Unmodified	_ATAASSSSLEK_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000423183.1_1_3:12112396-12112453:+|nuORF;ENST00000417985.1_1_X:46147855-46148119:-|nuORF;ENST00000450451.1_1_1:238090483-238090852:+|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2	ENSG00000075624|ENST00000646664|ACTB;ENSG00000159251|ENST00000290378|ACTC1	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2681274414062	2	526.266936	1050.51932	1.1618	0.00061142	-1.2747	-0.00067084	-0.1129	-5.9418E-05	526.2662101994201	23.388	0.56042	22.814	22.575	23.136	-0.57415					27	12	3	0	0	0	0.56641	1	1043	1043		47.228	1.2554	1	259670			2698	1338;2370	1812	1815	3111	3111					-0.003920628698551809
ATACCLPE	8	Unmodified	_ATACCLPE_					0	0	0		ENST00000508276.1_1_4:2933242-2933551:-|nuORF;ENST00000514031.5_1_4:2932567-2933551:-|nuORF	ENST00000508276.1_1_4:2933242-2933551:-|nuORF	ENST00000508276.1_1_4:2933242-2933551:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.17010498046875	2	404.172407	806.330261	-1.5918	-0.00064335	-4.3613	-0.0017627	-5.953	-0.0024061	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.8347	1	7390	7390		23.042	2.5607	1	6183600			2699	12974	1813	1816	3112	3112					-0.08065129968531437
ATAEPSEY	8	Unmodified	_ATAEPSEY_					0	0	0		ENST00000361740.8_1_22:43015298-43015643:-|nuORF	ENST00000361740.8_1_22:43015298-43015643:-|nuORF	ENST00000361740.8_1_22:43015298-43015643:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.1887512207031	2	434.190165	866.365778	1.2813	0.00055634	-2.086	-0.0009057	-0.80463	-0.00034936	434.1882648441819	96.398	0.96023	96.803	96.299	97.259	0.40498					54	22	4	0	0	0	0.87479	1	11558	11558		30.504	0	1	519340			2700	10491	1814	1817	3113	3113					-0.07275052915520064
ATAEPSEY	8	Unmodified	_ATAEPSEY_					0	0	0		ENST00000361740.8_1_22:43015298-43015643:-|nuORF	ENST00000361740.8_1_22:43015298-43015643:-|nuORF	ENST00000361740.8_1_22:43015298-43015643:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	434.190165	866.365778	1.1034	0.00047907	-1.2675	-0.00055032	-0.16411	-7.1255E-05	434.1882877075577	96.462	1.4427	96.866	96.416	97.859	0.40452	0.031567	0.0003661	NaN	30.504	72	34	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	491260			2701	10491	1814	1817							-0.07275052915520064
ATAGRPRP	8	Unmodified	_ATAGRPRP_					0	0	0			REV__ENSG00000204779|ENST00000377420|FOXD4L5	REV__ENSG00000204779|ENST00000377420|FOXD4L5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.23773193359375	2	413.238119	824.461684	-0.12335	-5.0972E-05	0.56146	0.00023202	0.43812	0.00018105	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.87479	1	7299	7299		30.504	3.7075	1	1978800	+		2702	21631	1815	1818	3114	3114					0.04243184505889985
ATALALTF	8	Unmodified	_ATALALTF_					0	0	0		nc|ENSG00000153093|Q9NUZ1-2|ACOXL;nc|ENSG00000153093|Q9NUZ1|ACOXL;ENSG00000153093|ENST00000439055|ACOXL	nc|ENSG00000153093|Q9NUZ1-2|ACOXL	nc|ENSG00000153093|Q9NUZ1-2|ACOXL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.1701965332031	2	404.234179	806.453805	-1.8322	-0.00074066	4.1743	0.0016874	2.342	0.00094673	404.2368689325314	78.49	0.156	78.617	78.542	78.698	0.12695					6	4	2	0	0	0	0.4196	1	7411	7411		10.866	0	1	14738			2703	5213	1816	1819	3115	3115					0.042836124657469554
ATALPTGTSK	10	Unmodified	_ATALPTGTSK_					0	0	0		nc|ENSG00000196470|Q8IUQ4-2|SIAH1;ENSG00000196470|ENST00000394725|SIAH1;nc|ENSG00000196470|Q8IUQ4-3|SIAH1	nc|ENSG00000196470|Q8IUQ4-2|SIAH1	nc|ENSG00000196470|Q8IUQ4-2|SIAH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.7637634277344	2	473.763832	945.513111	-0.295	-0.00013976	0.2352	0.00011143	-0.059808	-2.8335E-05	473.7638393269968	29.315	0.94589	29.225	28.887	29.833	-0.089546					57	21	4	0	0	0	0.2953	1	1861	1861		72.879	1.0018	1	1134800			2704	8062	1817	1820	3116	3116					0.038174636892904346
ATALVSAHSL	10	Unmodified	_ATALVSAHSL_					0	0	0		nc|ENSG00000197062|Q16670|ZSCAN26;ENSG00000197062|ENST00000421553|ZSCAN26	nc|ENSG00000197062|Q16670|ZSCAN26	nc|ENSG00000197062|Q16670|ZSCAN26	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.2672424316406	2	485.271824	968.529095	-1.0794	-0.00052381	-0.90344	-0.00043841	-1.9828	-0.00096222	485.2702189891836	85.61	0.34686	85.668	85.501	85.848	0.057899					10	7	2	0	0	0	0.37624	1	8671	8671		9.1829	0	1	26503			2705	8129	1818	1821	3117	3117					0.0435716992617472
ATALVTSAAAA	11	Unmodified	_ATALVTSAAAA_					0	0	0			REV__nc|ENSG00000104415|O95388-3|CCN4	REV__nc|ENSG00000104415|O95388-3|CCN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.76348876953125	2	473.763832	945.513111	-0.6507	-0.00030828	0.67422	0.00031942	0.02352	1.1143E-05	473.7640658991687	29.193	1.2558	29.164	28.65	29.906	-0.029207					55	28	3	0	0	0	0.31674	1	1831	1831		71.877	3.3928	1	1250200	+		2706	17456	1819	1822	3118	3118					0.038174636892563285
ATAMCCMQMV	10	Unmodified	_ATAMCCMQMV_					0	0	0		ENSG00000104059|ENST00000261275|ENTREP2	ENSG00000104059|ENST00000261275|ENTREP2	ENSG00000104059|ENST00000261275|ENTREP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.70361328125	2	544.706919	1087.39928	-0.064362	-3.5058E-05	-3.5562	-0.0019371	-3.6206	-0.0019722	544.7050091974189	31.654	0.69953	31.672	31.384	32.084	0.018362					34	16	3	0	0	0	0.8651	1	1756	1756		25.574	0.12388	1	61660			2707	2111	1820	1823	3119	3119					-0.14091873327129179
ATAPLLPRQN	10	Unmodified	_ATAPLLPRQN_					0	0	0		ENST00000569852.1_1_16:2613469-2613655:-|nuORF	ENST00000569852.1_1_16:2613469-2613655:-|nuORF	ENST00000569852.1_1_16:2613469-2613655:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.8136596679688	2	540.811648	1079.60874	0.11952	6.4638E-05	4.0799	0.0022065	4.1995	0.0022711	540.813674930169	34.68	1.5274	34.89	34.065	35.593	0.21002					91	37	3	0	0	0	0.6116	1	2555	2555		49.442	1.5259	1	1016600			2708	13987	1821	1824	3120	3120					0.07212236600184951
ATAPMDTT	8	Unmodified	_ATAPMDTT_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.1701965332031	2	404.181286	806.348019	2.4702	0.00099839	0.72332	0.00029235	3.1935	0.0012907	404.18212904999854	78.506	0.51558	78.557	78.268	78.783	0.051674					20	12	2	0	0	0	0.4196	1	7715	7715		21.96	0	1	38049			2709	7373	1822	1825	3121	3121					-0.0629009144201973
ATAPMDTT	8	Unmodified	_ATAPMDTT_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.17010498046875	2	404.181286	806.348019	-1.8321	-0.00074048	3.9281	0.0015877	2.096	0.00084718	404.18206098772805	78.355	0.44925	78.482	78.29	78.739	0.12695					18	14	2	0	0	0	0.4196	1	7376	7376		14.865	0	1	81826			2710	7373	1822	1825	3122	3122					-0.0629009144201973
ATAPSYPAGL	10	Unmodified	_ATAPSYPAGL_					0	0	0		ENSG00000105287|ENST00000291281|PRKD2;nc|ENSG00000105287|Q9BZL6-3|PRKD2	ENSG00000105287|ENST00000291281|PRKD2	ENSG00000105287|ENST00000291281|PRKD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2349548339844	2	474.245275	946.475997	-0.65487	-0.00031057	4.247	0.0020141	3.5922	0.0017036	474.2470773089234	29.431	0.43367	29.402	29.257	29.691	-0.029207					16	9	3	0	0	0	0.37624	1	1852	1852		35.618	7.364	1	63112			2711	2199	1823	1826	3123	3123					0.0006179214351504925
ATAPTHCQH	9	Unmodified	_ATAPTHCQH_					0	0	0		ENST00000436105.1_1_7:43551434-43551587:-|nuORF	ENST00000436105.1_1_7:43551434-43551587:-|nuORF	ENST00000436105.1_1_7:43551434-43551587:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2182312011719	2	483.216526	964.418499	1.5048	0.00072714	2.0355	0.0009836	3.5403	0.0017107	483.2173493133452	92.876	1.1325	93.323	92.904	94.037	0.44662					63	26	3	0	0	0	0.69624	1	11046	11046		40.778	3.6191	1	748980			2712	11720	1824	1827	3124	3124					-0.06513373333712025
ATAPVNQIQ	9	Unmodified	_ATAPVNQIQ_					0	0	0		ENSG00000023572|ENST00000367439|GLRX2;nc|ENSG00000023572|Q9NS18-2|GLRX2	ENSG00000023572|ENST00000367439|GLRX2	ENSG00000023572|ENST00000367439|GLRX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.25665283203125	2	471.256174	940.497795	-0.96244	-0.00045355	0.69954	0.00032966	-0.2629	-0.00012389	471.2564956140925	29.771	2.7125	29.799	28.794	31.507	0.028618					148	61	5	0	0	0	0.44421	1	1995	1995		54.776	5.3348	1	7198000			2713	860	1825	1828	3125	3125					0.025165968920987325
ATAQPELWVGK	11	Unmodified	_ATAQPELWVGK_					0	0	0		ENST00000409858.7_1_9:139977177-139977723:+|nuORF	ENST00000409858.7_1_9:139977177-139977723:+|nuORF	ENST00000409858.7_1_9:139977177-139977723:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.55535888671875	3	400.552151	1198.63462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.826	1	16.744	16.244	17.244	-0.0821								0	0	0	0.56276	1	177	177		28.577	8.9498	1				2714	11315	1826	1829	3126	3126					0.043250860517900946
ATARLVSP	8	Unmodified	_ATARLVSP_					0	0	0			REV__ENST00000263274.11_1_19:48673626-48673824:-|nuORF	REV__ENST00000263274.11_1_19:48673626-48673824:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.7419128417969	2	407.742702	813.470852	1.2989	0.00052962	-3.1403	-0.0012805	-1.8414	-0.00075083	407.74125603889695	25.528	1.2143	25.271	24.909	26.123	-0.2572					49	27	3	0	0	0	0.87259	1	1340	1340		58.782	3.2778	1	568780	+		2715	24444	1827	1830	3127	3127					0.05665533071567097
ATASRLPW	8	Unmodified	_ATASRLPW_					0	0	0		ENST00000419804.5_3_X:152937579-152953009:-|nuORF	ENST00000419804.5_3_X:152937579-152953009:-|nuORF	ENST00000419804.5_3_X:152937579-152953009:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2470397949219	2	451.248152	900.481751	-0.10221	-4.6121E-05	1.3002	0.00058673	1.198	0.00054061	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.85277	1	6379	6379		25.45	0	1	178200			2716	11442	1828	1831	3128	3128					0.027529354458465605
ATATFPTT	8	Unmodified	_ATATFPTT_					0	0	0			REV__nc|ENSG00000241935|Q86XE5-3|HOGA1	REV__nc|ENSG00000241935|Q86XE5-3|HOGA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.2048645019531	2	405.205618	808.396684	-0.18782	-7.6105E-05	-1.9721	-0.00079909	-2.1599	-0.0008752	405.20481127463523	77.736	2.7861	77.788	77.332	80.118	0.052696					165	97	3	0	0	0	0.87479	1	7546	7546		30.504	3.7075	1	140160	+		2717	23826	1829	1832	3129	3129					-0.0151785481062916
ATATFPTT	8	Unmodified	_ATATFPTT_					0	0	0			REV__nc|ENSG00000241935|Q86XE5-3|HOGA1	REV__nc|ENSG00000241935|Q86XE5-3|HOGA1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	405.205618	808.396684	-0.18782	-7.6105E-05	-1.9721	-0.00079909	-2.1599	-0.0008752	405.20481127463523	77.736	2.7861	77.788	77.332	80.118	0.052696	0.041568	0.0001433	NaN	30.504	165	97	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140160	+		2718	23826	1829	1832							-0.0151785481062916
ATATKKRG	8	Unmodified	_ATATKKRG_					0	0	0			REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	416.7546691894531	2	416.753601	831.49265	-0.18833	-7.8488E-05	3.7014	0.0015426	3.5131	0.0014641	416.75501517654936	69.335	0.60887	69.362	69.067	69.676	0.02636					48	32	2	0	0	0	0.85277	1	6565	6565		25.45	2.4077	1	213130	+		2719	17512	1830	1833	3130	3130					0.07016337820130047
ATATKKRG	8	Unmodified	_ATATKKRG_					0	0	0			REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.7549133300781	2	416.753601	831.49265	0.44827	0.00018682	3.2079	0.0013369	3.6562	0.0015237	416.75482420878427	69.04	0.8387	69.169	68.79	69.629	0.12838					83	36	3	0	0	0	0.79403	2	6247	6239;6247		63.306	32.803	1	1117600	+		2720	17512	1830	1833	3131;3132	3132					0.07016337820130047
ATATKKRG	8	Unmodified	_ATATKKRG_					0	0	0			REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.75482177734375	2	416.753601	831.49265	0.85655	0.00035697	2.7214	0.0011341	3.5779	0.0014911	416.7546905427035	66.077	1.7412	66.462	65.937	67.678	0.38581					138	48	4	0	0	0	0.87479	1	7201	7201		30.504	0.6621	1	3980900	+		2721	17512	1830	1833	3133	3133					0.07016337820130047
ATATKKRG	8	Unmodified	_ATATKKRG_					0	0	0			REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	416.753601	831.49265	-0.18833	-7.8488E-05	3.7014	0.0015426	3.5131	0.0014641	416.75501517654936	69.335	0.60887	69.362	69.067	69.676	0.02636	0.054215	-0.00035742	NaN	63.306	48	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	213130	+		2722	17512	1830	1833							0.07016337820130047
ATATVRVP	8	Unmodified	_ATATVRVP_					0	0	0		ENSG00000184601|ENST00000557649|C14orf180	ENSG00000184601|ENST00000557649|C14orf180	ENSG00000184601|ENST00000557649|C14orf180	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.7413635253906	2	407.742702	813.470852	1.2989	0.00052962	-3.1403	-0.0012805	-1.8414	-0.00075083	407.74125603889695	25.528	1.2143	25.271	24.909	26.123	-0.2572					49	27	3	0	0	0	0.91977	1	1332	1332		45.952	12.436	1	568780			2723	7627	1831	1834	3134	3134					0.05665533071567097
ATAVQTCN	8	Unmodified	_ATAVQTCN_					0	0	0			REV__ENSG00000032389|ENST00000382125|EIPR1	REV__ENSG00000032389|ENST00000382125|EIPR1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.5748596191406	2	404.186903	806.359253	2.7976	0.0011308	0.56687	0.00022912	3.3645	0.0013599	404.18695826337	83.782	0.61298	83.841	83.498	84.111	0.059258					22	13	2	0	0	0	0.4196	1	8397	8397		10.866	0	1	69267	+		2724	16277	1832	1835	3135	3135					-0.051672693478849396
ATAWRAARSPL	11	Unmodified	_ATAWRAARSPL_					0	0	0		ENSG00000154079|ENST00000370474|SDHAF4	ENSG00000154079|ENST00000370474|SDHAF4	ENSG00000154079|ENST00000370474|SDHAF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	600.3326416015625	2	600.335821	1198.65709	0.14163	8.5026E-05	-3.3017	-0.0019821	-3.1601	-0.0018971	600.333887960337	19.56	0.38957	19.487	19.3	19.69	-0.073704					14	10	2	0	0	0	0.68532	1	445	445		33.922	3.6039	1	34586			2725	5251	1833	1836	3136	3136					0.06570730240082412
ATDFDVLSY	9	Unmodified	_ATDFDVLSY_					0	0	0		ENST00000463347.5_1_3:45730948-45748420:+|nuORF;ENST00000445499.2_1_3:45730957-45754662:+|nuORF;ENST00000463237.5_1_3:45730948-45754703:+|nuORF;ENSG00000211456|ENST00000389061|SACM1L	ENST00000463347.5_1_3:45730948-45748420:+|nuORF	ENST00000463347.5_1_3:45730948-45748420:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.241455078125	2	515.740022	1029.46549	0.2252	0.00011614	-0.047391	-2.4441E-05	0.17781	9.1703E-05	515.7397895883646	80.223	0.54773	80.279	80.096	80.644	0.055916					27	16	2	0	0	0	0.76255	1	7969	7969		35.618	0	1	85071			2726	8565	1834	1837	3137	3137					-0.048062353015666304
ATDFDVLSY	9	Unmodified	_ATDFDVLSY_					0	0	0		ENST00000463347.5_1_3:45730948-45748420:+|nuORF;ENST00000445499.2_1_3:45730957-45754662:+|nuORF;ENST00000463237.5_1_3:45730948-45754703:+|nuORF;ENSG00000211456|ENST00000389061|SACM1L	ENST00000463347.5_1_3:45730948-45748420:+|nuORF	ENST00000463347.5_1_3:45730948-45748420:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	515.740022	1029.46549	-0.049197	-2.5373E-05	0.14359	7.4057E-05	0.094396	4.8684E-05	515.7397390419466	80.381	0.49744	80.443	80.259	80.756	0.062233	0.079293	0.00015071	NaN	35.618	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85897			2727	8565	1834	1837							-0.048062353015666304
ATDFDVLSY	9	Unmodified	_ATDFDVLSY_					0	0	0		ENST00000463347.5_1_3:45730948-45748420:+|nuORF;ENST00000445499.2_1_3:45730957-45754662:+|nuORF;ENST00000463237.5_1_3:45730948-45754703:+|nuORF;ENSG00000211456|ENST00000389061|SACM1L	ENST00000463347.5_1_3:45730948-45748420:+|nuORF	ENST00000463347.5_1_3:45730948-45748420:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	515.740022	1029.46549	0.59578	0.00030727	-0.088783	-4.5789E-05	0.507	0.00026148	516.2417003210753	80.429	0.50871	80.369	80.157	80.666	-0.059685	0.0054716	-8.8978E-05	NaN	35.618	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70533			2728	8565	1834	1837							-0.048062353015666304
ATDKSFVEK	9	Unmodified	_ATDKSFVEK_					0	0	0		ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;ENSG00000105357|ENST00000642316|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14	ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000105357|Q7Z406-4|MYH14	nc|ENSG00000133392|P35749-4|MYH11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7689208984375	2	512.769114	1023.52368	0.92826	0.00047598	-0.98997	-0.00050762	-0.061706	-3.1641E-05	512.7684512724358	22.716	0.75475	22.297	21.97	22.725	-0.41879					42	17	4	0	0	0	0.17181	1	933	933		79.713	19.594	1	536540			2729	14928;1829;2207	1835	1838	3138	3138					0.01285446343717922
ATDKSFVEK	9	Unmodified	_ATDKSFVEK_					0	0	0		ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;ENSG00000105357|ENST00000642316|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14	ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000105357|Q7Z406-4|MYH14	nc|ENSG00000133392|P35749-4|MYH11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.768310546875	2	512.769114	1023.52368	0.87728	0.00044984	-0.94824	-0.00048623	-0.070962	-3.6387E-05	512.7684517764806	22.796	1.0179	22.185	21.865	22.883	-0.6107					53	24	4	0	0	0	0.0358	1	958	958		114.89	40.64	1	625090			2730	14928;1829;2207	1835	1838	3139	3139					0.01285446343717922
ATDPDDTHAY	10	Unmodified	_ATDPDDTHAY_					0	0	0		nc|ENSG00000111799|Q99715-2|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1;ENSG00000111799|ENST00000322507|COL12A1	nc|ENSG00000111799|Q99715-2|COL12A1	nc|ENSG00000111799|Q99715-2|COL12A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.2227172851562	2	553.225268	1104.43598	0.74256	0.0004108	-0.81184	-0.00044913	-0.069282	-3.8329E-05	553.2246578864133	30.532	0.44304	30.52	30.333	30.776	-0.012024					22	11	3	0	0	0	0.86348	1	1616	1616		31.53	6.4038	1	58975			2731	2613	1836	1839	3140	3140					-0.11205799317713172
ATDRWYDEY	9	Unmodified	_ATDRWYDEY_					0	0	0		nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-4|PEX5;ENST00000539304.1_1_12:7344181-7354515:+|nuORF	nc|ENSG00000139197|P50542-2|PEX5	nc|ENSG00000139197|P50542-2|PEX5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	609.7570190429688	2	609.756735	1217.49892	-1.0666	-0.00065035	1.2809	0.00078106	0.21436	0.00013071	609.7575735801338	55.24	0.58977	55.267	55.03	55.62	0.027142					26	13	3	0	0	0	0.41984	1	4947	4947		56.434	3.0823	1	211270			2732	4354	1837	1840	3141	3141					-0.10113233529659738
ATDTMPGNL	9	Oxidation (M)	_ATDTM(Oxidation (M))PGNL_		ATDTM(1)PGNL		ATDTM(44)PGNL	0	0	1			REV__ENSG00000180998|ENST00000321662|GPR137C	REV__ENSG00000180998|ENST00000321662|GPR137C	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2124938964844	2	468.210575	934.406597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.314	1	70.276	69.776	70.776	-0.037865								0	0	0	0.32039	1	6818	6818		44.117	7.0883	1		+		2733	22432	1838	1841	3142	3142		340			-0.06323034867534716
ATDYTFAMY	9	Unmodified	_ATDYTFAMY_					0	0	0		ENST00000513956.5_1_6:41904284-42016364:-|nuORF;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3;ENSG00000112576|ENST00000372991|CCND3	ENST00000513956.5_1_6:41904284-42016364:-|nuORF	ENST00000513956.5_1_6:41904284-42016364:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7279663085938	2	541.7286	1081.44265	0.71007	0.00038466	-0.5587	-0.00030266	0.15137	8.2003E-05	541.7283145476214	76.628	0.48163	76.579	76.248	76.73	-0.048264					26	16	2	0	0	0	0.62081	1	7606	7606		45.952	11.779	1	110600			2734	2670	1839	1842	3143	3143					-0.09481577690712584
ATDYTFAMY	9	Unmodified	_ATDYTFAMY_					0	0	0		ENST00000513956.5_1_6:41904284-42016364:-|nuORF;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3;ENSG00000112576|ENST00000372991|CCND3	ENST00000513956.5_1_6:41904284-42016364:-|nuORF	ENST00000513956.5_1_6:41904284-42016364:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	541.7286	1081.44265	-0.24282	-0.00013154	0.29682	0.0001608	0.054007	2.9257E-05	541.7287097176741	76.734	0.39921	76.784	76.562	76.961	0.049194	0.14155	0.00049232	NaN	45.952	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93071			2735	2670	1839	1842							-0.09481577690712584
ATDYTFAMY	9	Unmodified	_ATDYTFAMY_					0	0	0		ENST00000513956.5_1_6:41904284-42016364:-|nuORF;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3;ENSG00000112576|ENST00000372991|CCND3	ENST00000513956.5_1_6:41904284-42016364:-|nuORF	ENST00000513956.5_1_6:41904284-42016364:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	541.7286	1081.44265	0.41622	0.00022548	-0.25201	-0.00013652	0.16421	8.8959E-05	541.7283396454573	76.515	0.38651	76.563	76.324	76.71	0.047974	-0.078976	-0.00010232	NaN	45.952	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90219			2736	2670	1839	1842							-0.09481577690712584
ATEGEHSRFKT	11	Unmodified	_ATEGEHSRFKT_					0	0	0			REV__ENSG00000136450|ENST00000258962|SRSF1	REV__ENSG00000136450|ENST00000258962|SRSF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	631.8077392578125	2	631.809833	1261.60511	-0.21418	-0.00013532	-2.7511	-0.0017382	-2.9652	-0.0018735	631.8081718479416	30.832	0.5972	30.785	30.497	31.094	-0.047062					23	15	2	0	0	0	0.74763	1	1713	1713		22.58	0.61977	1	30988	+		2737	19311	1840	1843	3144	3144					-0.015224779643403963
ATEKVRVGK	9	Unmodified	_ATEKVRVGK_					0	0	0			REV__ENSG00000196924|ENST00000369850|FLNA	REV__ENSG00000196924|ENST00000369850|FLNA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3011169433594	2	494.300916	986.587279	-0.58723	-0.00029027	0.13313	6.5808E-05	-0.4541	-0.00022446	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.77696	1	10266	10266		31.53	2.3803	1	65263000	+		2738	23181	1841	1844	3145	3145					0.09344851571484014
ATEPAIKI	8	Unmodified	_ATEPAIKI_					0	0	0			REV__nc|ENSG00000085491|Q6NUK1-2|SLC25A24	REV__nc|ENSG00000085491|Q6NUK1-2|SLC25A24	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.75177001953125	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.351	1	77.442	76.942	77.942	0.091438								0	0	0	0.30045	1	7229	7229		40.573	0	1		+		2739	16891	1842	1845	3146	3146					0.06383284011508294
ATERLKKFVF	10	Unmodified	_ATERLKKFVF_					0	0	0			REV__ENSG00000134070|ENST00000256458|IRAK2	REV__ENSG00000134070|ENST00000256458|IRAK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8673095703125	2	619.866423	1237.71829	1.6172	0.0010025	2.9706	0.0018414	4.5878	0.0028438	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.8651	1	11221	11221		25.574	2.0514	1	1541100	+		2740	19114	1843	1846	3147	3147					0.10894242219501393
ATESVSLYY	9	Unmodified	_ATESVSLYY_					0	0	0		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7474975585938	2	516.747847	1031.48114	0.0088494	4.5729E-06	-0.41412	-0.000214	-0.40527	-0.00020942	516.7476049705497	65.241	0.49527	65.206	64.933	65.428	-0.034798					42	22	2	0	0	0	0.74721	1	6250	6250		37.159	1.9584	1	469650			2741	1177	1844	1847	3148	3148					-0.03333948784529639
ATETDEPL	8	Unmodified	_ATETDEPL_					0	0	0			REV__nc|ENSG00000129691|Q9UBL3-2|ASH2L	REV__nc|ENSG00000129691|Q9UBL3-2|ASH2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.7052307128906	2	438.203273	874.391992	-0.94704	-0.000415	-3.6268	-0.0015893	-4.5738	-0.0020043	438.2018307937962	63.586	0.42773	63.616	63.444	63.872	0.030243					25	18	2	0	0	0	0.89962	1	5571	5571		38.806	0	1	62829	+		2742	18831	1845	1848	3149	3149					-0.050227837440274925
ATETDEPL	8	Unmodified	_ATETDEPL_					0	0	0			REV__nc|ENSG00000129691|Q9UBL3-2|ASH2L	REV__nc|ENSG00000129691|Q9UBL3-2|ASH2L	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	438.203273	874.391992	0.44428	0.00019469	-3.7874	-0.0016596	-3.3431	-0.0014649	438.2017089974572	63.663	0.39492	63.69	63.515	63.91	0.027138	0.036759	-9.6306E-05	NaN	38.806	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41205	+		2743	18831	1845	1848							-0.050227837440274925
ATETDEPL	8	Unmodified	_ATETDEPL_					0	0	0			REV__nc|ENSG00000129691|Q9UBL3-2|ASH2L	REV__nc|ENSG00000129691|Q9UBL3-2|ASH2L	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	438.203273	874.391992	-0.94704	-0.000415	-3.6268	-0.0015893	-4.5738	-0.0020043	438.2018307937962	63.586	0.42773	63.616	63.444	63.872	0.030243	-0.036759	4.4419E-05	NaN	38.806	25	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62829	+		2744	18831	1845	1848							-0.050227837440274925
ATEVELLNARV	11	Unmodified	_ATEVELLNARV_					0	0	0		ENSG00000131242|ENST00000621161|RAB11FIP4;nc|ENSG00000131242|Q86YS3-2|RAB11FIP4	ENSG00000131242|ENST00000621161|RAB11FIP4	ENSG00000131242|ENST00000621161|RAB11FIP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5639953613281	3	405.562827	1213.66665	0.39528	0.00016031	4.3969	0.0017832	4.7922	0.0019435	405.56450530615757	63.272	1.3532	63.394	62.754	64.107	0.12253					138	58	3	0	0	0	0.70737	1	5517	5517		21.032	1.7696	1	242080			2745	3721	1846	1849	3150	3150					0.0683645373494528
ATEVQFPVKPV	11	Unmodified	_ATEVQFPVKPV_					0	0	0		nc|ENSG00000198586|Q9UKI8-3|TLK1;nc|ENSG00000198586|Q9UKI8-4|TLK1;nc|ENSG00000198586|Q9UKI8-5|TLK1;ENSG00000198586|ENST00000431350|TLK1;nc|ENSG00000198586|Q9UKI8-2|TLK1	nc|ENSG00000198586|Q9UKI8-3|TLK1	nc|ENSG00000198586|Q9UKI8-3|TLK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5635986328125	3	405.564168	1213.67067	1.5319	0.00062128	-0.097166	-3.9407E-05	1.4347	0.00058187	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.6921	1	5904	5904		22.562	0	1	245170			2746	8291	1847	1850	3151	3151					0.0723854322866373
ATFFGIQLLK	10	Unmodified	_ATFFGIQLLK_					0	0	0		ENST00000562439.5_1_16:57238447-57238567:+|nuORF	ENST00000562439.5_1_16:57238447-57238567:+|nuORF	ENST00000562439.5_1_16:57238447-57238567:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.33740234375	2	569.336967	1136.65938	-0.23835	-0.0001357	0.097967	5.5776E-05	-0.14038	-7.9924E-05	569.3368993275722	84.832	0.6385	85.272	84.903	85.541	0.43967					35	15	3	0	0	0	0.099622	2	9893	9893;9905		101.25	37.045	1	575610			2747	13849	1848	1851	3152;3153	3152					0.09651765925195832
ATFFGIQLLK	10	Unmodified	_ATFFGIQLLK_					0	0	0		ENST00000562439.5_1_16:57238447-57238567:+|nuORF	ENST00000562439.5_1_16:57238447-57238567:+|nuORF	ENST00000562439.5_1_16:57238447-57238567:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.3380126953125	2	569.336967	1136.65938	0.51696	0.00029432	-0.30799	-0.00017535	0.20897	0.00011897	569.3366320750325	84.96	0.55266	85.408	85.033	85.586	0.44736					34	13	3	0	0	0	0.045977	1	9938	9938		109.48	35.223	1	766440			2748	13849	1848	1851	3154	3154					0.09651765925195832
ATFPLSVQK	9	Unmodified	_ATFPLSVQK_					0	0	0		ENSG00000110367|ENST00000534980|DDX6	ENSG00000110367|ENST00000534980|DDX6	ENSG00000110367|ENST00000534980|DDX6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.7840881347656	2	495.784567	989.554582	-0.95097	-0.00047148	0.47817	0.00023707	-0.4728	-0.00023441	495.7847227959132	49.007	0.76762	49.467	49.104	49.871	0.45983					41	18	3	0	0	0	0.64555	1	4760	4760		44.377	5.1244	1	1143300			2749	2524	1849	1852	3155	3155					0.05938644448622199
ATGAPPRR	8	Unmodified	_ATGAPPRR_					0	0	0		ENST00000479644.1_1_6:31939773-31940810:+|nuORF;nc|ENSG00000204344|P49842-2|STK19;nc|ENSG00000204344|P49842-1|STK19	ENST00000479644.1_1_6:31939773-31940810:+|nuORF	ENST00000479644.1_1_6:31939773-31940810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2370300292969	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.84341	1	7531	7531		24.203	4.8428	1	1341700			2750	12412	1850	1853	3156	3156					0.04243184505901354
ATGDGAKTLAI	11	Unmodified	_ATGDGAKTLAI_					0	0	0		nc|ENSG00000126500|Q9NZU1-1|FLRT1;ENSG00000126500|ENST00000682287|FLRT1;chr11:64104181-64116219|39|12.23|0.03|8.9|+|ENST00000246841|FLRT1,FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.2831726074219	2	509.282389	1016.55022	-1.6332	-0.00083176	1.4774	0.00075239	-0.15586	-7.9376E-05	509.2829787451453	36.928	0.52848	36.928	36.69	37.218	0					22	11	3	0	0	0	0.66009	1	2183	2183		37.508	3.3356	1	71812			2751	105	1851	1854	3157	3157					0.04261135235049096
ATGEQVCEV	9	Unmodified	_ATGEQVCEV_					0	0	0		ENST00000559266.5_1_15:58285255-58306437:-|nuORF;ENST00000558595.5_1_15:58304322-58357848:-|nuORF;nc|ENSG00000128918|O94788-2|ALDH1A2;nc|ENSG00000128918|O94788-3|ALDH1A2;ENSG00000128918|ENST00000249750|ALDH1A2	ENST00000559266.5_1_15:58285255-58306437:-|nuORF	ENST00000559266.5_1_15:58285255-58306437:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.20928955078125	2	468.210575	934.406597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.425	1	70.497	69.997	70.997	0.071037								0	0	0	0.29475	1	6373	6373		32.812	2.9709	1				2752	3567	1852	1855	3158	3158					-0.06323034867546085
ATGGRALALQ	10	Unmodified	_ATGGRALALQ_					0	0	0		ENSG00000164530|ENST00000373674|PI16	ENSG00000164530|ENST00000373674|PI16	ENSG00000164530|ENST00000373674|PI16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2783203125	2	479.277441	956.540328	-0.90579	-0.00043413	1.2321	0.00059054	0.32635	0.00015641	479.2779542538447	97.646	1.4109	97.646	97.118	98.528	0					77	33	3	0	0	0	0.8545	1	9800	9800		36.447	0.82846	1	589630			2753	5972	1853	1856	3159	3159					0.06031992020314192
ATGGRALALQ	10	Unmodified	_ATGGRALALQ_					0	0	0		ENSG00000164530|ENST00000373674|PI16	ENSG00000164530|ENST00000373674|PI16	ENSG00000164530|ENST00000373674|PI16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2773742675781	2	479.277441	956.540328	0.28639	0.00013726	-0.32449	-0.00015552	-0.038098	-1.826E-05	479.27712266759204	81.87	2.8073	82.296	80.642	83.45	0.42646					178	68	3	0	0	0	0.80179	1	9587	9587		39.253	5.0803	1	1790000			2754	5972	1853	1856	3160	3160					0.06031992020314192
ATGHILLYEVQ	11	Unmodified	_ATGHILLYEVQ_					0	0	0			REV__ENSG00000197635|ENST00000360534|DPP4;REV__ENST00000434918.6_1_2:162849795-162888681:-|nuORF	REV__ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3363647460938	2	622.337695	1242.66084	-0.073789	-4.5921E-05	-1.977	-0.0012304	-2.0508	-0.0012763	622.3363752507829	111.19	1.2568	111.19	110.57	111.83	0					110	41	4	0	0	0	0.77061	1	11585	11585		17.468	2.6031	1	190840	+		2755	23254;26672	1854	1857	3161	3161					0.0492135522326862
ATGKISKLG	9	Unmodified	_ATGKISKLG_					0	0	0		nc|ENSG00000183207|Q9Y230-2|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF	nc|ENSG00000183207|Q9Y230-2|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF	nc|ENSG00000183207|Q9Y230-2|RUVBL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.771240234375	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.7932	1	2306	2306		24.519	3.5723	1	1041500			2756	7508;14313	1855	1858	3162	3162					0.0865437527713766
ATGKKSSK	8	Unmodified	_ATGKKSSK_					0	0	0		nc|ENSG00000198301|Q9NVU7-2|SDAD1;ENST00000395710.5_1_4:76871905-76902632:-|nuORF;ENSG00000198301|ENST00000356260|SDAD1;ENST00000513089.5_1_4:76886972-76894529:-|nuORF	nc|ENSG00000198301|Q9NVU7-2|SDAD1	nc|ENSG00000198301|Q9NVU7-2|SDAD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2113037109375	2	403.74016	805.465767	-1.8502	-0.00074702	0.443	0.00017886	-1.4072	-0.00056816	403.74048504849185	85.725	0.55486	85.884	85.59	86.145	0.15851					15	12	2	0	0	0	0.4196	1	8331	8331		2.9294	2.9294	1	67313			2757	8263	1856	1859	3163	3163					0.055252292089562616
ATGLSASIVK	10	Unmodified	_ATGLSASIVK_					0	0	0			REV__ENSG00000112624|ENST00000314073|BICRAL	REV__ENSG00000112624|ENST00000314073|BICRAL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.7831115722656	2	473.782025	945.549496	-0.42615	-0.0002019	2.2552	0.0010685	1.829	0.00086657	473.7828976830325	21.758	0.79819	21.7	21.484	22.282	-0.057203					55	31	3	0	0	0	0.86471	1	651	651		30.318	1.1682	1	107510	+		2758	17956	1857	1860	3164	3164					0.07454340586002672
ATGNQGLRG	9	Unmodified	_ATGNQGLRG_					0	0	0			REV__ENSG00000118197|ENST00000331314|DDX59	REV__ENSG00000118197|ENST00000331314|DDX59	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2654113769531	2	437.230491	872.446428	2.5968	0.0011354	1.8919	0.00082719	4.4887	0.0019626	437.23086422105575	25.188	0.31157	24.757	24.627	24.939	-0.4311					10	6	3	0	0	0	0.20789	1	1308	1308		39.253	5.7599	1	24884	+		2759	18295	1858	1861	3165	3165					0.00510272918040755
ATGPRLAR	8	Unmodified	_ATGPRLAR_					0	0	0			REV__ENSG00000178971|ENST00000651323|CTC1	REV__ENSG00000178971|ENST00000651323|CTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.2538757324219	2	421.253769	840.492984	-0.18708	-7.8807E-05	0.65223	0.00027475	0.46515	0.00019595	421.25387987106194	84.393	1.9611	84.46	83.811	85.772	0.067177					92	44	3	0	0	0	0.91977	1	8417	8417		45.952	3.4775	1	712040	+		2760	22304	1859	1862	3166	3166					0.06635757539982023
ATGSWDSFLK	10	Unmodified	_ATGSWDSFLK_					0	0	0		nc|ENSG00000172354|P62879-2|GNB2;nc|ENSG00000111664|P16520-2|GNB3;ENSG00000172354|ENST00000303210|GNB2;ENSG00000111664|ENST00000229264|GNB3;ENSG00000078369|ENST00000378609|GNB1	nc|ENSG00000172354|P62879-2|GNB2	nc|ENSG00000172354|P62879-2|GNB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.278076171875	2	556.274564	1110.53457	-0.21442	-0.00011928	0.73505	0.00040889	0.52062	0.00028961	556.2745471630165	64.355	1.7191	64.742	63.919	65.638	0.38681					80	40	3	0	0	0	0.26675	2	6949	6938;6949		76.17	23.081	1	812590			2761	1397	1860	1863	3167;3168	3168					-0.016271512820139833
ATGSWDSFLK	10	Unmodified	_ATGSWDSFLK_					0	0	0		nc|ENSG00000172354|P62879-2|GNB2;nc|ENSG00000111664|P16520-2|GNB3;ENSG00000172354|ENST00000303210|GNB2;ENSG00000111664|ENST00000229264|GNB3;ENSG00000078369|ENST00000378609|GNB1	nc|ENSG00000172354|P62879-2|GNB2	nc|ENSG00000172354|P62879-2|GNB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.275390625	2	556.274564	1110.53457	0.065676	3.6534E-05	0.5748	0.00031975	0.64048	0.00035628	556.274462722407	64.264	1.6945	64.818	63.96	65.654	0.55386					83	40	3	0	0	0	0.28289	1	6939	6939		74.165	32.738	1	796650			2762	1397	1860	1863	3169	3169					-0.016271512820139833
ATHGAQQETHQ	11	Unmodified	_ATHGAQQETHQ_					0	0	0			REV__chr15:64366075-64373698|61|12.08|0.33|5.19|-|ENST00000558008|PCLAF,PCLAF	REV__chr15:64366075-64373698|61|12.08|0.33|5.19|-|ENST00000558008|PCLAF,PCLAF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.2763671875	2	604.276158	1206.53776	0.79346	0.00047947	2.4479	0.0014792	3.2414	0.0019587	604.2774646397876	28.744	0.43819	28.571	28.365	28.803	-0.17336					23	10	3	0	0	0	0.66929	1	1781	1781		36.447	2.2742	1	124450	+		2763	15618	1861	1864	3170	3170					-0.057245081752853366
ATHIARKAVEL	11	Unmodified	_ATHIARKAVEL_					0	0	0		ENSG00000137947|ENST00000370500|GTF2B	ENSG00000137947|ENST00000370500|GTF2B	ENSG00000137947|ENST00000370500|GTF2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5743408203125	3	403.575178	1207.70371	-1.8273	-0.00073744	0.97702	0.0003943	-0.85025	-0.00034314	403.5755152703731	81.064	0.6007	81.209	80.845	81.446	0.14513					41	13	4	0	0	0	0.72374	1	7719	7719		27.644	5.0823	1	520100			2764	4247	1862	1865	3171	3171					0.10816170071393572
ATHIARKAVEL	11	Unmodified	_ATHIARKAVEL_					0	0	0		ENSG00000137947|ENST00000370500|GTF2B	ENSG00000137947|ENST00000370500|GTF2B	ENSG00000137947|ENST00000370500|GTF2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.360107421875	2	604.859129	1207.70371	0.082073	4.9642E-05	-1.0653	-0.00064433	-0.98318	-0.00059469	604.8584757159402	82.084	1.3276	82.558	81.718	83.045	0.47383					56	29	2	0	0	0	0.67762	1	9425	9425		8.6937	0	1	3105600			2765	4247	1862	1865	3172	3172					0.10816170071393572
ATHIARKAVEL	11	Unmodified	_ATHIARKAVEL_					0	0	0		ENSG00000137947|ENST00000370500|GTF2B	ENSG00000137947|ENST00000370500|GTF2B	ENSG00000137947|ENST00000370500|GTF2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747985839844	3	403.575178	1207.70371	-0.098768	-3.986E-05	-1.4245	-0.00057487	-1.5232	-0.00061473	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.68431	1	9683	9683		34.087	0.16487	1	16485000			2766	4247	1862	1865	3173	3173					0.10816170071393572
ATHLLVAPLP	10	Unmodified	_ATHLLVAPLP_					0	0	0			REV__ENST00000428443.7_1_2:179967411-179967483:-|nuORF	REV__ENST00000428443.7_1_2:179967411-179967483:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3143920898438	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86305	1	12093	12093		31.955	2.8053	1	4038100	+		2767	26582	1863	1866	3174	3174					0.10343210236646883
ATHRLLPSLLP	11	Unmodified	_ATHRLLPSLLP_					0	0	0			REV__ENSG00000274209|ENST00000620264|ANTXRL	REV__ENSG00000274209|ENST00000620264|ANTXRL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.5843811035156	3	406.583674	1216.72919	-1.7909	-0.00072813	2.626	0.0010677	0.83517	0.00033957	406.5846406101276	111.69	0.38136	111.8	111.59	111.97	0.11118					29	11	3	0	0	0	0.75121	2	12022	12022;12054		21.78	4.6137	1	6428000	+		2768	23997	1864	1867	3175;3176	3175					0.12949644593822995
ATHRRLRI	8	Unmodified	_ATHRRLRI_					0	0	0			REV__ENST00000498134.1_1_13:33528197-33528527:-|nuORF	REV__ENST00000498134.1_1_13:33528197-33528527:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.8207092285156	2	511.820141	1021.62573	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.585	1	78.153	77.653	78.653	0.56836								0	0	0	0.28375	1	8864	8864		54.776	10.399	1		+		2769	27781	1865	1868	3177	3177					0.11578201996644566
ATHRRSRSR	9	Unmodified	_ATHRRSRSR_					0	0	0		ENSG00000167978|ENST00000301740|SRRM2;nc|ENSG00000167978|Q9UQ35-2|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	563.81591796875	2	563.818661	1125.62277	-1.0971	-0.00061854	-2.1832	-0.0012309	-3.2803	-0.0018495	564.3187451766267	54.029	0.89402	54.029	53.649	54.543	0					44	25	2	0	0	0	0.77696	1	4480	4480		31.53	1.0262	1	134080			2770	6348	1866	1869	3178	3178					0.0649832687183789
ATICTKLMKR	10	Unmodified	_ATICTKLMKR_					0	0	0		nc|ENSG00000100614|P35813-3|PPM1A	nc|ENSG00000100614|P35813-3|PPM1A	nc|ENSG00000100614|P35813-3|PPM1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.8338012695312	2	582.833211	1163.65187	-0.40613	-0.0002367	-0.56205	-0.00032758	-0.96818	-0.00056429	582.832911894326	94.456	2.7605	94.456	93.622	96.382	0					111	64	3	0	0	0	0.86047	1	9349	9349		23.523	0	1	367730			2771	14816	1867	1870	3179	3179					0.07658967061593103
ATIENIVN	8	Unmodified	_ATIENIVN_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2654113769531	2	437.23745	872.460347	2.8896	0.0012635	0.2106	9.2084E-05	3.1003	0.0013555	437.2372750971364	25.602	0.42519	25.171	24.806	25.231	-0.4311					15	9	2	0	0	0	0.4196	1	1308	1308		42.396	10.866	1	158410			2772	7954	1868	1871	3180	3180					0.019015056264720442
ATIENIVN	8	Unmodified	_ATIENIVN_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	437.23745	872.460347	0.053504	2.3394E-05	3.1612	0.0013822	3.2147	0.0014056	437.2373772505765	24.869	0.081076	24.969	24.924	25.005	0.10045	-0.1008	7.4162E-05	NaN	42.396	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15883			2773	7954	1868	1871							0.019015056264720442
ATIIRVTT	8	Unmodified	_ATIIRVTT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-5|CDH23;REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77105712890625	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.82658	1	2227	2227		21.96	1.013	1	1041500	+		2774	17672;29767	1869	1872	3181	3181					0.08654375277126292
ATIIRVTT	8	Unmodified	_ATIIRVTT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-5|CDH23;REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7676696777344	2	437.77146	873.528367	-1.5161	-0.00066369	0.60596	0.00026527	-0.91011	-0.00039842	437.77165455530013	42.195	1.723	42.892	42.344	44.067	0.69754					85	42	3	0	0	0	0.92394	1	3759	3759		47.657	7.0847	1	1268100	+		2775	17672;29767	1869	1872	3182	3182					0.08654375277126292
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3529663085938	2	582.355357	1162.69616	-0.28407	-0.00016543	-2.8357	-0.0016514	-3.1197	-0.0018168	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.64498	6	10898	10736;10756;10873;10898;10960;10984		39.253	7.0106	1	61091000			2776	4793	1870	1873	3183;3184;3185;3186;3187;3188	3186					0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3536376953125	2	582.355357	1162.69616	-0.28408	-0.00016544	-2.4923	-0.0014514	-2.7764	-0.0016168	582.3539590095555	107.8	1.0319	107.8	106.84	107.87	0					66	24	3	0	0	0	0.64498	1	11159	11159		39.253	7.723	1	7275300			2777	4793	1870	1873	3189	3189					0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.354248046875	2	582.355357	1162.69616	-0.84093	-0.00048972	-2.4295	-0.0014149	-3.2705	-0.0019046	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.5603	7	11507	11448;11460;11497;11507;11580;11592;11616		47.657	10.083	1	77752000			2778	4793	1870	1873	3190;3191;3192;3193;3194;3195;3196	3193					0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3538818359375	2	582.355357	1162.69616	0.15817	9.2113E-05	-3.4182	-0.0019906	-3.26	-0.0018985	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.60058	6	11389	11172;11340;11389;11449;11535;11571		44.377	14.734	1	78004000			2779	4793	1870	1873	3197;3198;3199;3200;3201;3202	3199					0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3540649414062	2	582.355357	1162.69616	0.72244	0.00042072	-3.9804	-0.002318	-3.258	-0.0018973	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.5603	5	11320	11247;11259;11281;11320;11356		47.657	19.775	1	132960000			2780	4793	1870	1873	3203;3204;3205;3206;3207	3206					0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3546142578125	2	582.355357	1162.69616	0.72221	0.00042058	-3.8205	-0.0022249	-3.0982	-0.0018043	582.3530452596038	106.74	1.0212	106.89	106.39	107.41	0.14843					77	24	4	0	0	0	0.72918	1	11404	11404		26.693	3.6504	1	1470000			2781	4793	1870	1873	3208	3208					0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3533935546875	2	582.355357	1162.69616	0.88325	0.00051437	-4.1095	-0.0023932	-3.2263	-0.0018788	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.53361	7	11210	11210;11270;11282;11294;11318;11330;11341		49.536	16.786	1	125340000			2782	4793	1870	1873	3209;3210;3211;3212;3213;3214;3215	3209					0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3530883789062	2	582.355357	1162.69616	-1.3468	-0.00078429	-1.8918	-0.0011017	-3.2386	-0.001886	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.5603	4	11134	11134;11171;11219;11231		47.657	16.128	1	120000000			2783	4793	1870	1873	3216;3217;3218;3219	3216					0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353271484375	2	582.355357	1162.69616	-1.3467	-0.00078427	-0.46555	-0.00027112	-1.8123	-0.0010554	582.3543799246081	113.19	0.23484	113.16	112.99	113.22	-0.032333					15	6	3	0	0	0	0.61369	1	12080	12080		42.864	10.052	1	2714600			2784	4793	1870	1873	3220	3220					0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3540649414062	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.64498	3	12095	12095;12106;12118		39.253	8.0071	1	3937500			2785	4793	1870	1873	3221;3222;3223	3221					0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3533325195312	2	582.355357	1162.69616	0.75692	0.00044079	-3.4476	-0.0020077	-2.6906	-0.0015669	582.3532376593708	103.08	2.584	103.3	103	105.58	0.22556					189	68	3	0	0	0	0.64498	9	12546	12498;12525;12546;12557;12582;12604;12615;12630;12702		39.253	10.083	1	7736200			2786	4793	1870	1873	3224;3225;3226;3227;3228;3229;3230;3231;3232	3226					0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	582.355357	1162.69616	-0.8425	-0.00049064	-3.4695	-0.0020205	-4.312	-0.0025111	582.3530264976896	107.88	0.31844	107.84	107.61	107.93	-0.042404	-0.068512	0.0007406	NaN	39.253	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7805700			2787	4793	1870	1873							0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	582.355357	1162.69616	0.1705	9.9293E-05	-3.734	-0.0021745	-3.5635	-0.0020752	582.3530429165567	107.88	0.3661	107.92	107.6	107.97	0.035622	0.012199	0.00043255	NaN	39.253	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5811800			2788	4793	1870	1873							0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	582.355357	1162.69616	0.7203	0.00041947	-4.7999	-0.0027952	-4.0796	-0.0023758	582.3524298661342	107.84	0.6711	107.98	107.36	108.03	0.13866	0.07365	-0.0008089	NaN	39.253	46	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12863000			2789	4793	1870	1873							0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	582.355357	1162.69616	0.88303	0.00051424	-4.2729	-0.0024883	-3.3899	-0.0019741	582.3527288295596	107.88	0.55867	107.96	107.45	108.01	0.084412	0.055846	-0.00019512	NaN	39.253	36	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11294000			2790	4793	1870	1873							0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6908	-0.00098465	-3.0376	-0.001769	582.3541021681893	107.87	0.5209	107.91	107.45	107.97	0.036118	0.0017807	0.0028123	NaN	39.253	34	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13174000			2791	4793	1870	1873							0.12132017751082458
ATIKDPPVLIP	11	Unmodified	_ATIKDPPVLIP_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	582.355357	1162.69616	4.2918	0.0024994	-9.3938	-0.0054705	-5.102	-0.0029712	582.8515411277373	107.86	0.30885	107.97	107.69	107.99	0.11715	0.069668	-0.0061595	NaN	39.253	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	536980			2792	4793	1870	1873							0.12132017751082458
ATIPLLVF	8	Unmodified	_ATIPLLVF_					0	0	0		ENSG00000179934|ENST00000326306|CCR8;nc|ENSG00000179934|P51685-2|CCR8	ENSG00000179934|ENST00000326306|CCR8	ENSG00000179934|ENST00000326306|CCR8	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26995849609375	2	437.275847	872.537141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.978	1	55.978	55.478	56.478	0								0	0	0	0.30928	1	4778	4778		46.766	9.738	1				2793	7307	1871	1874	3233	3233					0.09577348913614969
ATIVVPPK	8	Unmodified	_ATIVVPPK_					0	0	0			REV__nc|ENSG00000158636|Q7Z589-6|EMSY	REV__nc|ENSG00000158636|Q7Z589-6|EMSY	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.766845703125	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.649	1	48.643	48.143	49.143	-0.0056419								0	0	0	0.29498	1	4028	4028		26.796	5.0938	1		+		2794	20616	1872	1875	3234	3234					0.0979217825380374
ATIVVPPK	8	Unmodified	_ATIVVPPK_					0	0	0			REV__nc|ENSG00000158636|Q7Z589-6|EMSY	REV__nc|ENSG00000158636|Q7Z589-6|EMSY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76654052734375	2	412.765646	823.516739	-0.80567	-0.00033255	3.6306	0.0014986	2.8249	0.001166	412.76743574244557	48.894	3.0852	48.869	47.646	50.731	-0.025112					171	74	4	0	0	0	0.85277	2	4153	4129;4153		33.516	11.813	1	642490	+		2795	20616	1872	1875	3235;3236	3236					0.0979217825380374
ATIVVPPK	8	Unmodified	_ATIVVPPK_					0	0	0			REV__nc|ENSG00000158636|Q7Z589-6|EMSY	REV__nc|ENSG00000158636|Q7Z589-6|EMSY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.76641845703125	2	412.765646	823.516739	-1.8859	-0.00077844	3.9578	0.0016337	2.0719	0.00085522	412.7678129581843	48.855	3.3742	48.881	47.541	50.915	0.025574					176	94	2	0	0	0	0.86288	1	3730	3730		26.796	5.0938	1	621000	+		2796	20616	1872	1875	3237	3237					0.0979217825380374
ATIWVVKG	8	Unmodified	_ATIWVVKG_					0	0	0			REV__ENSG00000142319|ENST00000270349|SLC6A3;REV__nc|ENSG00000103546|P23975-3|SLC6A2	REV__ENSG00000142319|ENST00000270349|SLC6A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26580810546875	2	437.263271	872.511988	2.8534	0.0012477	2.2102	0.00096646	5.0637	0.0022142	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.8347	1	1467	1467		23.042	3.6825	1	21873000	+		2797	19736;17421	1873	1876	3238	3238					0.07063294111037521
ATIWVVKG	8	Unmodified	_ATIWVVKG_					0	0	0			REV__ENSG00000142319|ENST00000270349|SLC6A3;REV__nc|ENSG00000103546|P23975-3|SLC6A2	REV__ENSG00000142319|ENST00000270349|SLC6A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26568603515625	2	437.263271	872.511988	1.5079	0.00065936	4.3859	0.0019178	5.8938	0.0025772	437.26518584977657	27.503	2.0915	27.248	26.544	28.636	-0.25465					92	49	2	0	0	0	0.8347	1	1540	1540		23.042	2.5607	1	428760	+		2798	19736;17421	1873	1876	3239	3239					0.07063294111037521
ATKALTML	8	Unmodified	_ATKALTML_					0	0	0		ENSG00000100218|ENST00000216036|RSPH14	ENSG00000100218|ENST00000216036|RSPH14	ENSG00000100218|ENST00000216036|RSPH14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.7505187988281	2	424.749139	847.483725	0.12997	5.5206E-05	2.5285	0.001074	2.6585	0.0011292	424.7500871713905	40.264	0.96405	40.233	39.693	40.657	-0.030991					53	25	3	0	0	0	0.85277	1	2842	2842		25.45	8.0852	1	826790			2799	1809	1874	1877	3240	3240					0.05388228139452167
ATKAQQYV	8	Unmodified	_ATKAQQYV_					0	0	0		nc|ENSG00000138741|Q13507-3|TRPC3;ENSG00000138741|ENST00000379645|TRPC3	nc|ENSG00000138741|Q13507-3|TRPC3	nc|ENSG00000138741|Q13507-3|TRPC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.7451477050781	2	454.745442	907.476331	1.0531	0.00047889	-2.1634	-0.00098381	-1.1103	-0.00050492	454.74431898752607	103.74	1.4301	103.79	103.32	104.75	0.041489					80	34	3	0	0	0	0.87922	1	11289	11289		31.955	6.5047	1	827910			2800	4324	1875	1878	3241	3241					0.01889211863374385
ATKEHRNKRK	10	Unmodified	_ATKEHRNKRK_					0	0	0			REV__ENST00000389467.3_16:18871006-18872062:-|nuORF	REV__ENST00000389467.3_16:18871006-18872062:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3763427734375	2	634.370727	1266.7269	6.6614	0.0042258	3.2315	0.0020499	9.8928	0.0062757	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.64457	1	13428	13428		47.657	1.6851	1	7041100	+		2801	25995	1876	1879	3242	3242					0.10420608908680151
ATKERRGL	8	Unmodified	_ATKERRGL_					0	0	0		ENST00000571872.1_1_17:77925300-77925844:-|nuORF	ENST00000571872.1_1_17:77925300-77925844:-|nuORF	ENST00000571872.1_1_17:77925300-77925844:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7773132324219	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.535	1	79.478	78.978	79.978	-0.056503								0	0	0	0.29816	1	7964	7964		38.806	3.1879	1				2802	14005	1877	1880	3243	3243					0.07307411740191583
ATKGLTRQN	9	Unmodified	_ATKGLTRQN_					0	0	0			REV__ENST00000507028.1_1_4:6382026-6473314:-|nuORF	REV__ENST00000507028.1_1_4:6382026-6473314:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7802429199219	2	494.780348	987.546142	-0.074951	-3.7084E-05	0.21159	0.00010469	0.13664	6.7607E-05	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.69624	1	8662	8662		40.778	5.5774	1	651380	+		2803	27898	1878	1881	3244	3244					0.051870905319901794
ATKGSKPVR	9	Unmodified	_ATKGSKPVR_					0	0	0		ENSG00000100139|ENST00000215957|MICALL1	ENSG00000100139|ENST00000215957|MICALL1	ENSG00000100139|ENST00000215957|MICALL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28729248046875	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.7932	1	12316	12316		21.96	1.4781	1	3080300			2804	1801	1879	1882	3245	3245					0.0874858239999412
ATKGVKSSGLI	11	Unmodified	_ATKGVKSSGLI_					0	0	0			REV__nc|ENSG00000108551|Q9Y272-2|RASD1	REV__nc|ENSG00000108551|Q9Y272-2|RASD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.8202514648438	2	530.821681	1059.62881	-0.034622	-1.8378E-05	-1.4405	-0.00076466	-1.4751	-0.00078304	530.820933749492	80.358	1.1642	80.42	79.976	81.14	0.062225					91	34	3	0	0	0	0.7144	1	7920	7920		29.17	2.1227	1	600980	+		2805	17717	1880	1883	3246	3246					0.10137987540133508
ATKGVKSSGLI	11	Unmodified	_ATKGVKSSGLI_					0	0	0			REV__nc|ENSG00000108551|Q9Y272-2|RASD1	REV__nc|ENSG00000108551|Q9Y272-2|RASD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.8206176757812	2	530.821681	1059.62881	-0.034444	-1.8284E-05	-1.2984	-0.00068923	-1.3329	-0.00070751	530.8208487478996	82.524	1.2472	82.59	82.132	83.379	0.065918					77	28	4	0	0	0	0.69931	2	8154	8154;8177		31.634	4.9414	1	1479900	+		2806	17717	1880	1883	3247;3248	3247					0.10137987540133508
ATKGVKSSGLI	11	Unmodified	_ATKGVKSSGLI_					0	0	0			REV__nc|ENSG00000108551|Q9Y272-2|RASD1	REV__nc|ENSG00000108551|Q9Y272-2|RASD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8209228515625	2	530.821681	1059.62881	-0.07706	-4.0905E-05	0.081983	4.3518E-05	0.0049226	2.613E-06	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.72106	1	7632	7632		28.081	2.5074	1	1032800	+		2807	17717	1880	1883	3249	3249					0.10137987540133508
ATKGVKSSGLI	11	Unmodified	_ATKGVKSSGLI_					0	0	0			REV__nc|ENSG00000108551|Q9Y272-2|RASD1	REV__nc|ENSG00000108551|Q9Y272-2|RASD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8209838867188	2	530.821681	1059.62881	-1.2397	-0.00065807	-0.29687	-0.00015758	-1.5366	-0.00081565	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.61824	1	7597	7597		42.338	1.5599	1	869100	+		2808	17717	1880	1883	3250	3250					0.10137987540133508
ATKGVKSSGLI	11	Unmodified	_ATKGVKSSGLI_					0	0	0			REV__nc|ENSG00000108551|Q9Y272-2|RASD1	REV__nc|ENSG00000108551|Q9Y272-2|RASD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8211669921875	2	530.821681	1059.62881	-0.047896	-2.5424E-05	-1.0165	-0.0005396	-1.0644	-0.00056502	530.8209770202351	79.275	0.97966	79.825	79.318	80.298	0.54945					57	22	3	0	0	0	0.74022	1	9090	9090		24.232	2.5295	1	876930	+		2809	17717	1880	1883	3251	3251					0.10137987540133508
ATKHTSRSH	9	Unmodified	_ATKHTSRSH_					0	0	0			REV__chr16:65285439-65311414|13|14.46|0.25|5.83|-|1|LINC00922,LINC00922|1	REV__chr16:65285439-65311414|13|14.46|0.25|5.83|-|1|LINC00922,LINC00922|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.769775390625	2	512.767771	1023.52099	0.31104	0.00015949	3.8033	0.0019502	4.1144	0.0021097	512.7694620417714	30.122	0.60137	30.147	29.882	30.483	0.025013					36	14	3	0	0	0	0.58668	1	1545	1545		47.657	5.2612	1	151100	+		2810	15637	1881	1884	3252	3252					0.010170357294214227
ATKKPAPEK	9	Unmodified	_ATKKPAPEK_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;ENST00000567229.5_1_15:66791747-66793486:-|nuORF;ENST00000422486.1_1_3:185135285-185135612:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2898254394531	2	485.290017	968.565481	0.52696	0.00025573	-0.23378	-0.00011345	0.29317	0.00014227	485.28957286690087	15.76	0.13638	15.271	15.204	15.34	-0.48917					8	3	3	0	0	0	0.41984	1	47	47		56.434	3.4971	1	85872			2811	6934	1882	1885	3253	3253					0.07994046822898326
ATKKPAPEK	9	Unmodified	_ATKKPAPEK_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;ENST00000567229.5_1_15:66791747-66793486:-|nuORF;ENST00000422486.1_1_3:185135285-185135612:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	485.290017	968.565481	0.16502	8.0083E-05	0.30118	0.00014616	0.4662	0.00022624	485.28988206787017	15.798	0.12844	15.199	15.119	15.248	-0.59873	-0.035836	0.00033467	NaN	56.434	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54754			2812	6934	1882	1885							0.07994046822898326
ATKQGNAVTLG	11	Unmodified	_ATKQGNAVTLG_					0	0	0		nc|ENSG00000105699|Q86X29-6|LSR;nc|ENSG00000105699|Q86X29-5|LSR;nc|ENSG00000105699|Q86X29-2|LSR;ENSG00000105699|ENST00000605618|LSR;nc|ENSG00000105699|Q86X29-3|LSR;nc|ENSG00000105699|Q86X29-4|LSR;nc|ENSG00000105699|Q86X29|LSR	nc|ENSG00000105699|Q86X29-6|LSR	nc|ENSG00000105699|Q86X29-6|LSR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2930908203125	2	530.293288	1058.57202	0.74166	0.0003933	-0.55232	-0.00029289	0.18935	0.00010041	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.69248	1	9004	9004		32.751	1.1163	1	2081200			2813	2243	1883	1886	3254	3254					0.04507939983614051
ATKQRSRKKN	10	Unmodified	_ATKQRSRKKN_					0	0	0			REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2480163574219	3	406.245944	1215.716	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.92	1	110.96	110.46	111.46	0.049095								0	0	0	0.45132	1	13460	13460		19.263	1.7947	1		+		2814	29873	1884	1887	3255	3255					0.11677206534432116
ATKRIPDP	8	Unmodified	_ATKRIPDP_					0	0	0		nc|ENSG00000171804|Q6ZQQ6|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;ENSG00000171804|ENST00000447313|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2593078613281	2	449.261259	896.507966	-1.1655	-0.00052364	-0.32901	-0.00014781	-1.4946	-0.00067145	449.26086608568033	70.705	0.68031	70.776	70.454	71.134	0.071037					61	34	2	0	0	0	0.87064	1	6403	6403		29.15	0	1	315510			2815	6711	1885	1888	3256	3256					0.055572046173210765
ATKRIQPSD	9	Unmodified	_ATKRIQPSD_					0	0	0			REV__ENSG00000266028|ENST00000573034|SRGAP2	REV__ENSG00000266028|ENST00000573034|SRGAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.280029296875	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.64555	1	9185	9185		44.377	1.5129	1	1903500	+		2816	23961	1886	1889	3257	3257					0.03911670812135526
ATKRKMLF	8	Unmodified	_ATKRKMLF_					0	0	0			REV__nc|ENSG00000278023|Q8NG50-12|RDM1	REV__nc|ENSG00000278023|Q8NG50-12|RDM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.79541015625	2	497.796955	993.579357	0.12484	6.2144E-05	-2.2112	-0.0011007	-2.0864	-0.0010386	497.7955900071464	48.374	0.68279	48.369	47.966	48.649	-0.0056381					42	15	3	0	0	0	0.8347	1	3988	3988		23.042	0	1	381930	+		2817	24029	1887	1890	3258	3258					0.08231001050342002
ATKRKMLF	8	Unmodified	_ATKRKMLF_					0	0	0			REV__nc|ENSG00000278023|Q8NG50-12|RDM1	REV__nc|ENSG00000278023|Q8NG50-12|RDM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.7950439453125	2	497.796955	993.579357	-1.2593	-0.00062688	-0.71711	-0.00035698	-1.9764	-0.00098385	497.79616758279207	48.708	1.9058	48.709	47.99	49.896	0.00017166					121	43	4	0	0	0	0.87479	1	4133	4133		30.504	0	1	500820	+		2818	24029	1887	1890	3259	3259					0.08231001050342002
ATKRKMLF	8	Unmodified	_ATKRKMLF_					0	0	0			REV__nc|ENSG00000278023|Q8NG50-12|RDM1	REV__nc|ENSG00000278023|Q8NG50-12|RDM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7955322265625	2	497.796955	993.579357	-0.92593	-0.00046092	-1.3157	-0.00065495	-2.2416	-0.0011159	497.79610236473553	46.294	0.72507	47.217	46.794	47.519	0.92315					52	17	4	0	0	0	0.87064	2	4349	4349;4371		31.955	3.6994	1	1386700	+		2819	24029	1887	1890	3260;3261	3260					0.08231001050342002
ATKRKMLF	8	Unmodified	_ATKRKMLF_					0	0	0			REV__nc|ENSG00000278023|Q8NG50-12|RDM1	REV__nc|ENSG00000278023|Q8NG50-12|RDM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.79541015625	2	497.796955	993.579357	-1.1205	-0.0005578	-0.94797	-0.0004719	-2.0685	-0.0010297	497.79623460886916	46.969	0.95358	47.892	47.476	48.429	0.92315					58	22	4	0	0	0	0.85277	1	4475	4475		25.45	1.2474	1	771250	+		2820	24029	1887	1890	3262	3262					0.08231001050342002
ATKRKMLF	8	Unmodified	_ATKRKMLF_					0	0	0			REV__nc|ENSG00000278023|Q8NG50-12|RDM1	REV__nc|ENSG00000278023|Q8NG50-12|RDM1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	497.796955	993.579357	-1.1205	-0.0005578	-0.94797	-0.0004719	-2.0685	-0.0010297	497.79623460886916	46.969	0.95358	47.892	47.476	48.429	0.92315	0.1015	-8.6148E-05	NaN	25.45	58	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	771250	+		2821	24029	1887	1890							0.08231001050342002
ATKTKVIN	8	Unmodified	_ATKTKVIN_					0	0	0		chr12:18088956-18198401|14|92.57|0.0|23.14|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|98;chr12:18143293-18198304|14|75.14|0.0|22.84|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198304,18203231|RERGL,None|98;chr12:18143293-18197336|19|33.89|0.0|21.69|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|98;chr12:18088956-18197336|15|76.93|0.0|22.88|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|98;chr12:18143293-18198401|18|114.39|0.0|23.45|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|98	chr12:18088956-18198401|14|92.57|0.0|23.14|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|98	chr12:18088956-18198401|14|92.57|0.0|23.14|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|98	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.770263671875	2	437.77146	873.528367	-1.5161	-0.00066369	0.60596	0.00026527	-0.91011	-0.00039842	437.77165455530013	42.195	1.723	42.892	42.344	44.067	0.69754					85	42	3	0	0	0	0.81897	1	3791	3791		20.947	1.587	1	1268100			2822	119	1888	1891	3263	3263					0.0865437527713766
ATLALAPIL	9	Unmodified	_ATLALAPIL_					0	0	0		ENSG00000180155|ENST00000652477|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.787841796875	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.7932	1	3171	3171		25.45	1.2474	1	403970			2823	7315	1889	1892	3264	3264					0.11308733942325944
ATLASNEKL	9	Unmodified	_ATLASNEKL_					0	0	0			REV__nc|ENSG00000153266|Q8TBJ5-2|FEZF2	REV__nc|ENSG00000153266|Q8TBJ5-2|FEZF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.76348876953125	2	473.763832	945.513111	-0.6507	-0.00030828	0.67422	0.00031942	0.02352	1.1143E-05	473.7640658991687	29.193	1.2558	29.164	28.65	29.906	-0.029207					55	28	3	0	0	0	0.14386	1	1819	1819		84.916	0	1	1250200	+		2824	20342	1890	1893	3265	3265					0.03817463689279066
ATLCKKLP	8	Unmodified	_ATLCKKLP_					0	0	0			REV__ENST00000464326.1_1_9:19116415-19116484:-|nuORF	REV__ENST00000464326.1_1_9:19116415-19116484:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26519775390625	2	437.264956	872.515359	-1.6274	-0.00071159	3.2998	0.0014429	1.6724	0.00073129	437.2663457196616	22.467	1.2654	22.516	22.142	23.407	0.048553					168	64	5	0	0	0	0.82658	1	652	652		21.96	1.4781	1	1779900	+		2825	27090	1891	1894	3266	3266					0.07400220893384812
ATLEQAHQAL	10	Unmodified	_ATLEQAHQAL_					0	0	0		nc|ENSG00000164116|Q02108-2|GUCY1A1;ENSG00000164116|ENST00000506455|GUCY1A1	nc|ENSG00000164116|Q02108-2|GUCY1A1	nc|ENSG00000164116|Q02108-2|GUCY1A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	541.2861938476562	2	541.285463	1080.55637	-1.7029	-0.00092177	1.6465	0.00089123	-0.056423	-3.0541E-05	541.2862100780545	20.29	0.5934	20.29	20.067	20.66	0					57	27	3	0	0	0	0.85981	1	482	482		35.152	1.2304	1	123340			2826	5921	1892	1895	3267	3267					0.01931653466544958
ATLEQAHQAL	10	Unmodified	_ATLEQAHQAL_					0	0	0		nc|ENSG00000164116|Q02108-2|GUCY1A1;ENSG00000164116|ENST00000506455|GUCY1A1	nc|ENSG00000164116|Q02108-2|GUCY1A1	nc|ENSG00000164116|Q02108-2|GUCY1A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.2857666015625	2	541.285463	1080.55637	0.95607	0.00051751	-1.076	-0.00058242	-0.11992	-6.4911E-05	541.2847282396424	20.535	0.58039	20.465	20.183	20.763	-0.070011					63	26	3	0	0	0	0.6116	1	519	519		49.442	8.0149	1	207610			2827	5921	1892	1895	3268	3268					0.01931653466544958
ATLEVSFVG	9	Unmodified	_ATLEVSFVG_					0	0	0			REV__ENSG00000130158|ENST00000294618|DOCK6	REV__ENSG00000130158|ENST00000294618|DOCK6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.7470397949219	2	461.74765	921.480748	0.2189	0.00010108	-2.9386	-0.0013569	-2.7197	-0.0012558	461.74617064702255	20.12	0.73787	19.651	19.397	20.135	-0.46967					28	15	3	0	0	0	0.58151	1	628	628		47.916	3.3845	1	433790	+		2828	18850	1893	1896	3269	3269					0.016866762862946416
ATLFFNPQ	8	Unmodified	_ATLFFNPQ_					0	0	0		nc|ENSG00000011021|P51797-6|CLCN6;ENSG00000011021|ENST00000346436|CLCN6;nc|ENSG00000011021|P51797-5|CLCN6	nc|ENSG00000011021|P51797-6|CLCN6	nc|ENSG00000011021|P51797-6|CLCN6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.25469970703125	2	469.242535	936.470518	0.59757	0.00028041	-1.3021	-0.00061102	-0.70457	-0.00033062	469.24125822955517	81.408	1.1559	81.551	80.737	81.893	0.14352					37	26	2	0	0	0	0.4196	1	7844	7844		29.15	8.2026	1	50501			2829	777	1894	1897	3270	3270					-0.00025886648290907033
ATLFVKISLQ	10	Unmodified	_ATLFVKISLQ_					0	0	0		ENST00000461445.5_1_3:38049266-38050137:-|nuORF;ENST00000417185.6_1_3:38049266-38049721:-|nuORF;nc|ENSG00000187091|P51178-2|PLCD1;ENSG00000187091|ENST00000334661|PLCD1	ENST00000461445.5_1_3:38049266-38050137:-|nuORF;nc|ENSG00000187091|P51178-2|PLCD1	nc|ENSG00000187091|P51178-2|PLCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3401489257812	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.8545	1	12618	12618		36.447	10.873	1	4071000			2830	7838;12023	1895	1898	3271	3271					0.11535748579603933
ATLGALKPE	9	Unmodified	_ATLGALKPE_					0	0	0		ENST00000414198.5_1_3:18486636-18505828:+|nuORF	ENST00000414198.5_1_3:18486636-18505828:+|nuORF	ENST00000414198.5_1_3:18486636-18505828:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.26324462890625	2	450.263468	898.512382	-1.6704	-0.00075212	2.2112	0.00099561	0.54079	0.0002435	450.26422275635036	29.694	0.8719	29.717	29.352	30.224	0.022985					48	19	4	0	0	0	0.19818	1	1892	1892		74.255	5.4682	1	347100			2831	11361	1896	1899	3272	3272					0.05906669040234647
ATLGKVGTK	9	Unmodified	_ATLGKVGTK_					0	0	0			REV__ENSG00000083720|ENST00000196371|OXCT1	REV__ENSG00000083720|ENST00000196371|OXCT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7710876464844	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.7932	1	3044	3044		24.519	8.046	1	9763800	+		2832	16859	1897	1900	3273	3273					0.0865437527713766
ATLGLTQLGL	10	Unmodified	_ATLGLTQLGL_					0	0	0			REV__ENSG00000026559|ENST00000371571|KCNG1	REV__ENSG00000026559|ENST00000371571|KCNG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.79779052734375	2	493.797675	985.580796	-0.94135	-0.00046483	1.0038	0.00049565	0.062405	3.0816E-05	493.7979750871814	74.201	0.62273	74.592	74.248	74.87	0.39111					33	14	3	0	0	0	0.2953	1	8359	8359		72.879	22.855	1	422680	+		2833	16260	1898	1901	3274	3274					0.08742913620085346
ATLGLTQLGL	10	Unmodified	_ATLGLTQLGL_					0	0	0			REV__ENSG00000026559|ENST00000371571|KCNG1	REV__ENSG00000026559|ENST00000371571|KCNG1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	493.797675	985.580796	-0.94135	-0.00046483	1.0038	0.00049565	0.062405	3.0816E-05	493.7979750871814	74.201	0.62273	74.592	74.248	74.87	0.39111	0.031099	0.00039019	NaN	72.879	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	422680	+		2834	16260	1898	1901							0.08742913620085346
ATLGNVWGH	9	Unmodified	_ATLGNVWGH_					0	0	0			REV__ENST00000437322.2_1_X:49642981-49643347:-|nuORF	REV__ENST00000437322.2_1_X:49642981-49643347:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7286376953125	2	477.743234	953.471915	0.33385	0.00015949	-3.6768	-0.0017566	-3.343	-0.0015971	477.740574758503	97.85	0.24578	98.227	98.081	98.327	0.37679					9	5	2	0	0	0	0.20789	1	11792	11792		35.618	13.039	1	59230	+		2835	26703	1899	1902	3275	3275					-0.006682525595238076
ATLIPVPT	8	Unmodified	_ATLIPVPT_					0	0	0		ENST00000538029.1_1_12:9162377-9162479:+|nuORF	ENST00000538029.1_1_12:9162377-9162479:+|nuORF	ENST00000538029.1_1_12:9162377-9162479:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2485046386719	2	406.249829	810.485105	1.4359	0.00058334	-3.9293	-0.0015963	-2.4934	-0.0010129	406.24811193904833	90.886	2.3214	90.819	90.264	92.586	-0.067085					123	55	4	0	0	0	0.87922	1	9518	9518		31.955	5.1588	1	1147600			2836	13458	1900	1903	3276	3276					0.07228185499855044
ATLKCKAIG	9	Unmodified	_ATLKCKAIG_					0	0	0		ENSG00000156564|ENST00000338305|LRFN2	ENSG00000156564|ENST00000338305|LRFN2	ENSG00000156564|ENST00000338305|LRFN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.76837158203125	2	452.767863	903.521173	-1.6999	-0.00076965	3.2319	0.0014633	1.532	0.00069366	452.76922459739603	29.888	2.1263	29.917	28.5	30.627	0.028618					94	48	4	0	0	0	0.69624	1	1915	1915		40.778	0.20554	1	831070			2837	5382	1901	1904	3277	3277					0.065553194050608
ATLKCKAIG	9	Unmodified	_ATLKCKAIG_					0	0	0		ENSG00000156564|ENST00000338305|LRFN2	ENSG00000156564|ENST00000338305|LRFN2	ENSG00000156564|ENST00000338305|LRFN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.7684631347656	2	452.767863	903.521173	0.29423	0.00013322	1.2543	0.0005679	1.5485	0.00070112	452.76829397496084	30.028	2.0344	29.938	28.887	30.921	-0.089544					86	46	3	0	0	0	0.69624	1	1937	1937		40.778	11.629	1	1023800			2838	5382	1901	1904	3278	3278					0.065553194050608
ATLKCKAIG	9	Unmodified	_ATLKCKAIG_					0	0	0		ENSG00000156564|ENST00000338305|LRFN2	ENSG00000156564|ENST00000338305|LRFN2	ENSG00000156564|ENST00000338305|LRFN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	452.767863	903.521173	-1.3272	-0.0006009	4.2423	0.0019208	2.9151	0.0013199	452.76887564127634	29.552	0.88074	29.619	29.321	30.201	0.066727	-0.22245	0.0020957	NaN	40.778	58	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123350			2839	5382	1901	1904							0.065553194050608
ATLKEKAH	8	Unmodified	_ATLKEKAH_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2604064941406	2	449.261259	896.507966	-0.031705	-1.4244E-05	-1.4161	-0.00063622	-1.4478	-0.00065046	449.26046135217877	71.325	1.0336	71.873	71.284	72.317	0.54756					58	24	3	0	0	0	0.86677	1	7959	7959		27.882	1.1893	1	1233100	+		2840	16877	1902	1905	3279	3279					0.055572046173210765
ATLKLRTPLP	10	Unmodified	_ATLKLRTPLP_					0	0	0		ENST00000243498.9_1_4:122722566-122723007:+|nuORF	ENST00000243498.9_1_4:122722566-122723007:+|nuORF	ENST00000243498.9_1_4:122722566-122723007:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.3532104492188	2	555.355691	1108.69683	-0.45068	-0.00025029	-3.7051	-0.0020576	-4.1558	-0.0023079	555.3535032243398	101.3	2.2254	101.3	100.77	103	0					164	54	4	0	0	0	0.82886	2	10276	10276;10300		37.812	12.237	1	2945100			2841	9260	1903	1906	3280;3281	3280					0.14682857190791765
ATLKLRTPLP	10	Unmodified	_ATLKLRTPLP_					0	0	0		ENST00000243498.9_1_4:122722566-122723007:+|nuORF	ENST00000243498.9_1_4:122722566-122723007:+|nuORF	ENST00000243498.9_1_4:122722566-122723007:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.3535766601562	2	555.355691	1108.69683	-0.86355	-0.00047958	-3.4797	-0.0019325	-4.3433	-0.0024121	555.3536421650435	101.16	2.3681	101.19	100.7	103.07	0.031036					166	56	5	0	0	0	0.80179	1	10853	10853		39.253	11.371	1	6361400			2842	9260	1903	1906	3282	3282					0.14682857190791765
ATLKWILENK	10	Unmodified	_ATLKWILENK_					0	0	0		nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I;nc|ENSG00000196275|Q86UP8-2|GTF2IRD2;nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B;ENST00000457594.2_7:74237150-74267816:-|nuORF;nc|ENSG00000196275|Q86UP8-5|GTF2IRD2;nc|ENSG00000196275|Q86UP8-3|GTF2IRD2;ENSG00000174428|ENST00000472837|GTF2IRD2B;ENSG00000196275|ENST00000451013|GTF2IRD2	nc|ENSG00000263001|P78347-2|GTF2I;ENSG00000174428|ENST00000472837|GTF2IRD2B	nc|ENSG00000263001|P78347-2|GTF2I	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.359375	2	608.358431	1214.70231	-0.12181	-7.4104E-05	0.082882	5.0422E-05	-0.038927	-2.3681E-05	608.3584086998155	53.576	0.54563	54.161	53.872	54.418	0.58474					23	12	3	0	0	0	0.17795	1	5439	5439		91.265	20.449	1	479440			2843	8936;6931	1904	1907	3283	3283					0.10354535982583002
ATLKWILENK	10	Unmodified	_ATLKWILENK_					0	0	0		nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I;nc|ENSG00000196275|Q86UP8-2|GTF2IRD2;nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B;ENST00000457594.2_7:74237150-74267816:-|nuORF;nc|ENSG00000196275|Q86UP8-5|GTF2IRD2;nc|ENSG00000196275|Q86UP8-3|GTF2IRD2;ENSG00000174428|ENST00000472837|GTF2IRD2B;ENSG00000196275|ENST00000451013|GTF2IRD2	nc|ENSG00000263001|P78347-2|GTF2I;ENSG00000174428|ENST00000472837|GTF2IRD2B	nc|ENSG00000263001|P78347-2|GTF2I	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	608.358431	1214.70231	0.81366	0.000495	-0.20804	-0.00012657	0.60561	0.00036843	608.3577073626187	53.753	0.58554	54.166	53.951	54.537	0.4139	0.0029191	-0.00023704	NaN	91.265	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	565560			2844	8936;6931	1904	1907							0.10354535982583002
ATLLCLVF	8	Unmodified	_ATLLCLVF_					0	0	0		nc|ENSG00000136933|Q7Z6M1-2|RABEPK;ENSG00000136933|ENST00000373538|RABEPK	nc|ENSG00000136933|Q7Z6M1-2|RABEPK	nc|ENSG00000136933|Q7Z6M1-2|RABEPK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2554016113281	2	440.254057	878.493561	-0.15815	-6.9625E-05	3.1321	0.0013789	2.974	0.0013093	440.25528143106743	67.722	0.75465	67.743	67.424	68.179	0.021599					73	33	3	0	0	0	0.83466	1	6369	6369		23.037	1.3344	1	271080			2845	4161	1905	1908	3284	3284					0.049454161448238665
ATLLDLTQ	8	Unmodified	_ATLLDLTQ_					0	0	0			REV__nc|ENSG00000160752|P14324-2|FDPS	REV__nc|ENSG00000160752|P14324-2|FDPS	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77105712890625	2	437.74765	873.480748	-0.045657	-1.9986E-05	0.61786	0.00027047	0.57221	0.00025048	437.7479129511007	38.218	1.068	38.16	37.673	38.741	-0.057915					48	33	2	0	0	0	0.4196	1	2227	2227		25.574	5.5773	1	82371	+		2846	20736	1906	1909	3285	3285					0.03894676286279264
ATLLLSRM	8	Unmodified	_ATLLLSRM_					0	0	0			REV__ENST00000517956.5_1_8:124511968-124512073:-|nuORF	REV__ENST00000517956.5_1_8:124511968-124512073:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.767822265625	2	452.767863	903.521173	0.2516	0.00011392	1.1299	0.00051159	1.3815	0.00062551	452.7682264428771	29.782	1.1421	29.809	29.156	30.298	0.026833					41	32	2	0	0	0	0.87479	1	1512	1512		30.504	0	1	71812	+		2847	28057	1907	1910	3286	3286					0.06555319405072169
ATLLRNSP	8	Unmodified	_ATLLRNSP_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.25396728515625	2	436.253434	870.492316	0.73685	0.00032145	2.2612	0.00098647	2.9981	0.0013079	436.25437799492886	109.98	0.6684	110.05	109.85	110.52	0.073685					29	23	2	0	0	0	0.8347	1	11814	11814		23.042	1.0826	1	1402700			2848	8292	1908	1911	3287	3287					0.051889181002820806
ATLNLPGMH	9	Unmodified	_ATLNLPGMH_					0	0	0		ENSG00000154217|ENST00000581322|PITPNC1	ENSG00000154217|ENST00000581322|PITPNC1	ENSG00000154217|ENST00000581322|PITPNC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	477.24627685546875	2	477.247295	952.480036	0.48847	0.00023312	-1.9411	-0.00092637	-1.4526	-0.00069325	477.24619345386253	68.431	1.3932	68.559	67.916	69.309	0.12839					120	53	3	0	0	0	0.72402	1	6114	6114		38.806	1.647	1	594020			2849	5261	1909	1912	3288	3288					0.0018955836559371164
ATLPALLGL	9	Unmodified	_ATLPALLGL_					0	0	0		ENST00000472157.1_1_1:46806507-46807258:+|nuORF	ENST00000472157.1_1_1:46806507-46807258:+|nuORF	ENST00000472157.1_1_1:46806507-46807258:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7804870605469	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.7932	1	3782	3782		26.796	0	1	6567600			2850	12257	1910	1913	3289	3289					0.10388447425293634
ATLPALLGL	9	Unmodified	_ATLPALLGL_					0	0	0		ENST00000472157.1_1_1:46806507-46807258:+|nuORF	ENST00000472157.1_1_1:46806507-46807258:+|nuORF	ENST00000472157.1_1_1:46806507-46807258:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7781982421875	2	434.778754	867.542954	-1.4872	-0.00064659	2.9694	0.001291	1.4823	0.00064445	434.7799081673859	43.398	0.96524	44.172	43.498	44.463	0.7738					64	23	3	0	0	0	0.7932	1	3898	3898		20.482	1.1219	1	2227600			2851	12257	1910	1913	3290	3290					0.10388447425293634
ATLPPLYPKSQ	11	Unmodified	_ATLPPLYPKSQ_					0	0	0		ENSG00000174718|ENST00000312561|RESF1	ENSG00000174718|ENST00000312561|RESF1	ENSG00000174718|ENST00000312561|RESF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5646057128906	3	405.564168	1213.67067	-1.8662	-0.00075687	3.2637	0.0013236	1.3975	0.00056676	405.5653987385133	59.885	1.7634	59.979	59.006	60.769	0.094059					140	62	3	0	0	0	0.75544	1	5208	5208		14.243	0	1	349460			2852	6956	1911	1914	3291	3291					0.0723854322866373
ATLQALVAC	9	Unmodified	_ATLQALVAC_					0	0	0		nc|ENSG00000103194|Q14694-2|USP10;ENSG00000103194|ENST00000219473|USP10;nc|ENSG00000103194|Q14694-3|USP10	nc|ENSG00000103194|Q14694-2|USP10	nc|ENSG00000103194|Q14694-2|USP10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.6358642578125	2	445.244221	888.473888	-0.80449	-0.00035819	-0.66391	-0.0002956	-1.4684	-0.0006538	445.24390666207745	38.284	0.35475	38.626	38.303	38.658	0.34187					9	8	2	0	0	0	0.20789	1	3104	3104		35.618	11.416	1	43988			2853	14825	1912	1915	3292	3292					0.025190401340410062
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2655334472656	2	437.266876	872.519199	-2.1366	-0.00093428	-0.53823	-0.00023535	-2.6749	-0.0011696	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.90523	1	665	665		40.778	3.7497	1	999210	+		2854	30032;29702;27945	1913	1916	3293	3293					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26556396484375	2	437.266876	872.519199	-2.1128	-0.00092385	-0.58974	-0.00025787	-2.7025	-0.0011817	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.89043	2	813	792;813		44.117	10.601	1	1366900	+		2855	30032;29702;27945	1913	1916	3294;3295	3295					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26556396484375	2	437.266876	872.519199	0.72217	0.00031578	-3.1375	-0.0013719	-2.4154	-0.0010562	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.87479	1	703	703		30.504	2.6214	1	944940	+		2856	30032;29702;27945	1913	1916	3296	3296					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2655944824219	2	437.266876	872.519199	0.61137	0.00026733	-3.2	-0.0013992	-2.5886	-0.0011319	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.89043	2	874	850;874		49.442	10.189	1	1313200	+		2857	30032;29702;27945	1913	1916	3297;3298	3298					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.265625	2	437.266876	872.519199	-0.37471	-0.00016385	-2.2126	-0.0009675	-2.5873	-0.0011313	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.91982	1	785	785		45.972	5.3996	1	970200	+		2858	30032;29702;27945	1913	1916	3299	3299					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2655334472656	2	437.266876	872.519199	1.7902	0.0007828	-4.1426	-0.0018114	-2.3524	-0.0010286	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.91472	1	718	718		44.117	6.9577	1	738160	+		2859	30032;29702;27945	1913	1916	3300	3300					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.265625	2	437.266876	872.519199	1.7622	0.00077054	-4.3406	-0.001898	-2.5785	-0.0011275	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.88185	2	887	887;931		35.618	5.7767	1	1079000	+		2860	30032;29702;27945	1913	1916	3301;3302	3301					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26556396484375	2	437.266876	872.519199	-1.6274	-0.00071159	-1.0909	-0.00047703	-2.7183	-0.0011886	437.2663457196616	22.467	1.2654	22.516	22.142	23.407	0.048553					168	64	5	0	0	0	0.87479	1	664	664		30.504	1.3541	1	1779900	+		2861	30032;29702;27945	1913	1916	3303	3303					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2655029296875	2	437.266876	872.519199	-1.6247	-0.00071044	-1.1033	-0.00048243	-2.728	-0.0011929	437.26636390033156	24.021	1.8701	24.079	23.417	25.287	0.058165					191	86	4	0	0	0	0.9283	1	808	808		49.442	6.9671	1	2248600	+		2862	30032;29702;27945	1913	1916	3304	3304					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.265625	2	437.266876	872.519199	0.03062	1.3389E-05	-2.6363	-0.0011528	-2.6057	-0.0011394	437.2656144717129	22.266	1.1262	22.354	22.073	23.199	0.088013					130	57	3	0	0	0	0.91472	2	665	660;665		49.442	8.6634	1	2198600	+		2863	30032;29702;27945	1913	1916	3305;3306	3306					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2650146484375	2	437.266876	872.519199	0.044355	1.9395E-05	-2.8438	-0.0012435	-2.7995	-0.0012241	437.26562029129207	23.787	1.9639	23.882	23.206	25.169	0.094501					226	94	5	0	0	0	0.86677	5	766	766;777;784;791;795		53.351	17.733	1	2622700	+		2864	30032;29702;27945	1913	1916	3307;3308;3309;3310;3311	3307					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26544189453125	2	437.266876	872.519199	0.51664	0.00022591	-3.1072	-0.0013587	-2.5906	-0.0011328	437.26538540238977	22.419	1.3051	22.41	21.975	23.28	-0.0088234					141	67	4	0	0	0	0.89043	2	650	650;655		40.778	7.364	1	1945900	+		2865	30032;29702;27945	1913	1916	3312;3313	3312					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2655334472656	2	437.266876	872.519199	0.46111	0.00020163	-3.2258	-0.0014106	-2.7647	-0.0012089	437.2654513325837	23.967	1.9466	23.969	23.291	25.237	0.0018959					213	95	5	0	0	0	0.89043	3	792	780;792;796		49.442	15.926	1	2561300	+		2866	30032;29702;27945	1913	1916	3314;3315;3316	3315					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26556396484375	2	437.266876	872.519199	0.27465	0.0001201	-3.2994	-0.0014427	-3.0248	-0.0013226	437.2655143696572	24.107	1.3602	23.725	23.153	24.514	-0.38178					100	30	5	0	0	0	0.87259	3	1150	1126;1150;1162		58.782	21.261	1	12963000	+		2867	30032;29702;27945	1913	1916	3317;3318;3319	3318					0.0778402671146523
ATLRSRAV	8	Unmodified	_ATLRSRAV_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF;REV__nc|ENSG00000067182|P19438-5|TNFRSF1A;REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2657775878906	2	437.266876	872.519199	0.051124	2.2355E-05	-3.1793	-0.0013902	-3.1282	-0.0013678	437.26563820123806	25.538	2.1653	25.281	24.501	26.666	-0.25721					170	48	6	0	0	0	0.89679	4	1404	1306;1318;1342;1404		53.351	11.015	1	21512000	+		2868	30032;29702;27945	1913	1916	3320;3321;3322;3323	3323					0.0778402671146523
ATLSAIGKH	9	Unmodified	_ATLSAIGKH_					0	0	0			REV__nc|ENSG00000143493|Q9NVH2-4|INTS7	REV__nc|ENSG00000143493|Q9NVH2-4|INTS7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.26055908203125	2	449.261259	896.507966	0.057954	2.6037E-05	-1.3536	-0.00060812	-1.2956	-0.00058208	449.2605008010548	66.1	1.0485	66.652	66.2	67.248	0.5526					65	29	3	0	0	0	0.7932	1	7213	7213		25.574	0	1	957500	+		2869	19816	1914	1917	3324	3324					0.055572046173210765
ATLTKRRE	8	Unmodified	_ATLTKRRE_					0	0	0			REV__ENST00000459722.1_3_X:102840533-102840984:+|nuORF	REV__ENST00000459722.1_3_X:102840533-102840984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7905578613281	2	487.790715	973.566878	-1.4694	-0.00071678	1.0759	0.00052482	-0.39353	-0.00019196	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.88185	1	8162	8162		32.812	2.3088	1	607090	+		2870	26989	1915	1918	3325	3325					0.07903680911658739
ATLVALTEG	9	Unmodified	_ATLVALTEG_					0	0	0			REV__ENST00000416144.5_1_7:99160096-99161679:+|nuORF	REV__ENST00000416144.5_1_7:99160096-99161679:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7486572265625	2	437.74765	873.480748	0.21288	9.3186E-05	-0.29208	-0.00012786	-0.079208	-3.4673E-05	437.74740591023846	42.455	0.83459	42.52	42.201	43.035	0.065037					38	24	2	0	0	0	0.76255	1	2863	2863		35.618	1.4457	1	158810	+		2871	26430	1916	1919	3326	3326					0.03894676286279264
ATLVTAGHK	9	Unmodified	_ATLVTAGHK_					0	0	0			REV__ENSG00000198125|ENST00000397326|MB	REV__ENSG00000198125|ENST00000397326|MB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.26080322265625	2	449.261259	896.507966	-0.13632	-6.1244E-05	-1.331	-0.00059798	-1.4674	-0.00065923	449.26055039529075	68.162	1.4065	68.547	67.946	69.352	0.38483					66	33	3	0	0	0	0.74721	1	7515	7515		37.159	1.5408	1	1822600	+		2872	23301	1917	1920	3327	3327					0.05557204617332445
ATLYIITT	8	Unmodified	_ATLYIITT_					0	0	0		ENST00000474820.5_1_2:161129726-161129813:-|nuORF	ENST00000474820.5_1_2:161129726-161129813:-|nuORF	ENST00000474820.5_1_2:161129726-161129813:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.2616271972656	2	448.260394	894.506234	0.30626	0.00013729	-3.2698	-0.0014657	-2.9635	-0.0013284	448.2588270898945	89.76	2.8105	90.21	89.202	92.013	0.45058					113	70	4	0	0	0	0.85277	1	10630	10630		25.45	3.7478	1	1731800			2873	12312	1918	1921	3328	3328					0.05476150808715374
ATMLRSLL	8	Unmodified	_ATMLRSLL_					0	0	0		ENSG00000197406|ENST00000510508|DIO3	ENSG00000197406|ENST00000510508|DIO3	ENSG00000197406|ENST00000510508|DIO3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.76885986328125	2	452.767863	903.521173	-2.0307	-0.00091944	3.8225	0.0017307	1.7918	0.00081129	452.7693705732477	29.816	0.72486	29.816	29.483	30.208	0					42	24	2	0	0	0	0.86288	1	1325	1325		26.796	2.2921	1	85883			2874	8160	1919	1922	3329	3329					0.06555319405072169
ATNDSVVADK	10	Unmodified	_ATNDSVVADK_					0	0	0		ENST00000575556.1_1_16:67970119-67970555:-|nuORF;ENSG00000205220|ENST00000358514|PSMB10	ENST00000575556.1_1_16:67970119-67970555:-|nuORF	ENST00000575556.1_1_16:67970119-67970555:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2532958984375	2	510.253828	1018.4931	0.72823	0.00037158	-1.531	-0.00078121	-0.8028	-0.00040963	510.2529887289039	23.767	0.55502	23.385	23.108	23.663	-0.38178					27	12	3	0	0	0	0.32482	2	1084	1075;1084		70.399	10.468	1	297170			2875	8517	1920	1923	3330;3331	3331					-0.015403320413270194
ATNDSVVADK	10	Unmodified	_ATNDSVVADK_					0	0	0		ENST00000575556.1_1_16:67970119-67970555:-|nuORF;ENSG00000205220|ENST00000358514|PSMB10	ENST00000575556.1_1_16:67970119-67970555:-|nuORF	ENST00000575556.1_1_16:67970119-67970555:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2527770996094	2	510.253828	1018.4931	1.8251	0.00093124	-2.6117	-0.0013326	-0.78668	-0.00040141	510.2523862232492	23.754	0.59693	23.18	22.836	23.433	-0.57415					27	13	3	0	0	0	0.42897	1	1085	1085		61.691	13.732	1	224690			2876	8517	1920	1923	3332	3332					-0.015403320413270194
ATNGKVLKK	9	Unmodified	_ATNGKVLKK_					0	0	0		ENSG00000115008|ENST00000263339|IL1A	ENSG00000115008|ENST00000263339|IL1A	ENSG00000115008|ENST00000263339|IL1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.8055114746094	2	479.805834	957.597115	-0.3896	-0.00018693	0.44181	0.00021198	0.052203	2.5047E-05	479.80596198547045	16.364	0.22998	15.765	15.648	15.878	-0.59873					10	4	3	0	0	0	0.36616	1	126	126		60.118	3.3972	1	152180			2877	2806	1921	1924	3333	3333					0.11662039576845018
ATNGKVLKK	9	Unmodified	_ATNGKVLKK_					0	0	0		ENSG00000115008|ENST00000263339|IL1A	ENSG00000115008|ENST00000263339|IL1A	ENSG00000115008|ENST00000263339|IL1A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	479.805834	957.597115	1.0605	0.00050883	-1.2306	-0.00059043	-0.17006	-8.1595E-05	479.80512582229665	16.376	0.27293	15.889	15.779	16.052	-0.48718	0.061746	-0.001162	NaN	60.118	9	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129230			2878	2806	1921	1924							0.11662039576845018
ATNKDTKIAK	10	Unmodified	_ATNKDTKIAK_					0	0	0		ENSG00000138039|ENST00000294954|LHCGR;nc|ENSG00000138039|P22888-2|LHCGR	ENSG00000138039|ENST00000294954|LHCGR	ENSG00000138039|ENST00000294954|LHCGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3171997070312	2	545.316763	1088.61897	0.15577	8.4944E-05	-0.048112	-2.6236E-05	0.10766	5.8708E-05	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.86106	1	9118	9118		33.922	1.1092	1	17220000			2879	4260	1922	1925	3334	3334					0.07820799534761136
ATNLDLIV	8	Unmodified	_ATNLDLIV_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.7504577636719	2	429.750193	857.485833	-1.7422	-0.0007487	2.3085	0.00099207	0.56632	0.00024338	429.7510562737313	35.44	2.4929	35.471	35.255	37.748	0.031132					176	69	3	0	0	0	0.81485	2	1925	1925;1934		62.107	3.3696	1	1409200	+		2880	22167	1923	1926	3335;3336	3335					0.05138980148922201
ATNLDLIV	8	Unmodified	_ATNLDLIV_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.75030517578125	2	429.750193	857.485833	0.14732	6.3313E-05	0.46597	0.00020025	0.6133	0.00026357	429.7502450669041	35.27	2.574	35.376	35.139	37.713	0.10604					195	79	3	0	0	0	0.77771	2	1852	1852;1892		64.207	3.2353	1	1419900	+		2881	22167	1923	1926	3337;3338	3337					0.05138980148922201
ATNLDLIV	8	Unmodified	_ATNLDLIV_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7506408691406	2	429.750193	857.485833	0.60427	0.00025969	0.37111	0.00015949	0.97539	0.00041917	429.75036736011566	34.927	1.9228	35.138	34.854	36.777	0.21003					152	48	4	0	0	0	0.88185	2	2743	2647;2743		37.812	3.639	1	5113100	+		2882	22167	1923	1926	3339;3340	3340					0.05138980148922201
ATNLDLIV	8	Unmodified	_ATNLDLIV_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.74981689453125	2	429.750193	857.485833	-2.154	-0.00092569	1.0157	0.0004365	-1.1383	-0.00048919	429.75051038702645	40.625	2.1327	41.017	40.832	42.965	0.39209					111	57	2	0	0	0	0.88601	2	3608	3560;3608		37.812	3.6689	1	10174000	+		2883	22167	1923	1926	3341;3342	3342					0.05138980148922201
ATNLDLIV	8	Unmodified	_ATNLDLIV_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.75042724609375	2	429.750193	857.485833	1.5892	0.00068294	-0.58551	-0.00025162	1.0037	0.00043132	429.74995933180253	34.855	1.9588	35.237	34.934	36.893	0.3812					144	49	4	0	0	0	0.90523	2	2793	2781;2793		49.442	3.4896	1	5947200	+		2884	22167	1923	1926	3343;3344	3344					0.05138980148922201
ATNLDLIV	8	Unmodified	_ATNLDLIV_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7485046386719	2	429.750193	857.485833	-1.2651	-0.00054369	0.44911	0.000193	-0.81601	-0.00035068	429.7502304021701	40.953	2.5169	41.587	40.841	43.358	0.6339					165	67	3	0	0	0	0.94135	1	3591	3591		54.776	3.4409	1	8697100	+		2885	22167	1923	1926	3345	3345					0.05138980148922201
ATNLDLIV	8	Unmodified	_ATNLDLIV_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	429.750193	857.485833	0.22203	9.5419E-05	-0.89178	-0.00038324	-0.66975	-0.00028783	429.7496633357104	41.442	2.1799	41.411	41.176	43.356	-0.030987	-0.21401	-0.00044275	NaN	54.776	108	53	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1016800	+		2886	22167	1923	1926							0.05138980148922201
ATNLDLIV	8	Unmodified	_ATNLDLIV_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	429.750193	857.485833	-1.2327	-0.00052974	0.55609	0.00023898	-0.67657	-0.00029076	429.7502532862173	41.715	2.2501	41.677	41.368	43.618	-0.038223	0.0523	0.00080169	NaN	54.776	123	53	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	719780	+		2887	22167	1923	1926							0.05138980148922201
ATNLDLIV	8	Unmodified	_ATNLDLIV_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	429.750193	857.485833	0.80134	0.00034437	-1.3818	-0.00059385	-0.58051	-0.00024947	429.74938599459927	41.821	3.0032	41.825	41.503	44.506	0.0034142	0.19996	-0.00086396	NaN	54.776	129	72	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	698500	+		2888	22167	1923	1926							0.05138980148922201
ATNQDFIQ	8	Unmodified	_ATNQDFIQ_					0	0	0		ENSG00000010322|ENST00000345716|NISCH;nc|ENSG00000010322|Q9Y2I1-2|NISCH;ENST00000489895.5_1_3:52514938-52524786:+|nuORF	ENSG00000010322|ENST00000345716|NISCH	ENSG00000010322|ENST00000345716|NISCH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.72308349609375	2	468.724707	935.43486	-1.0822	-0.00050726	-1.9959	-0.00093555	-3.0782	-0.0014428	468.7236147293877	70.106	0.76979	70.177	69.93	70.7	0.071037					66	37	3	0	0	0	0.87479	1	6352	6352		30.504	2.6214	1	1251800			2889	767	1924	1927	3346	3346					-0.03543968895951366
ATPGAPRIE	9	Unmodified	_ATPGAPRIE_					0	0	0		ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.2530822753906	2	456.250892	910.48723	-0.6868	-0.00031335	1.8327	0.00083617	1.1459	0.00052282	456.2522848412093	52.226	1.3217	52.202	51.696	53.018	-0.023849					71	31	3	0	0	0	0.77696	1	4603	4603		31.53	1.0262	1	153970			2890	8983	1925	1928	3347	3347					0.02840614237675254
ATPGKNRR	8	Unmodified	_ATPGKNRR_					0	0	0		ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.27435302734375	2	450.262125	898.509697	0.47914	0.00021574	3.4803	0.0015671	3.9595	0.0017828	450.26323606886007	92.574	0.25391	93.021	92.819	93.073	0.44661					10	5	3	0	0	0	0.4196	1	11016	11016		35.618	0	1	64306			2891	3851	1926	1929	3348	3348					0.056382584259381474
ATPKGLLLLQR	11	Unmodified	_ATPKGLLLLQR_					0	0	0		nc|ENSG00000146350|Q96NH3-4|TBC1D32;ENSG00000146350|ENST00000398212|TBC1D32	nc|ENSG00000146350|Q96NH3-4|TBC1D32	nc|ENSG00000146350|Q96NH3-4|TBC1D32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9295349121094	3	403.92744	1208.76049	2.3249	0.0009391	3.1739	0.001282	5.4989	0.0022211	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.76892	1	3773	3773		17.833	0	1	2948200			2892	4836	1927	1930	3349	3349					0.16446217627890292
ATPKKPLL	8	Unmodified	_ATPKKPLL_					0	0	0			REV__nc|ENSG00000047849|P27816-6|MAP4	REV__nc|ENSG00000047849|P27816-6|MAP4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.28607177734375	2	434.286746	866.558939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.837	1	57.808	57.308	58.308	-0.029865								0	0	0	0.2939	1	5352	5352		27.882	3.6795	1		+		2893	29685	1928	1931	3350	3350					0.12032153662175915
ATPKKSIKK	9	Unmodified	_ATPKKSIKK_					0	0	0		ENSG00000124575|ENST00000244534|H1-3	ENSG00000124575|ENST00000244534|H1-3	ENSG00000124575|ENST00000244534|H1-3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.8291931152344	2	500.829309	999.644065	0.56584	0.00028339	-0.48406	-0.00024243	0.081782	4.0959E-05	500.828939397558	15.823	0.25575	15.224	15.119	15.375	-0.59873					10	6	2	0	0	0	0.41566	1	52	52		56.721	6.6965	1	248480			2894	3345	1929	1932	3351	3351					0.1442289912798742
ATPKKTVPK	9	Unmodified	_ATPKKTVPK_					0	0	0		ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.3094787597656	2	485.30821	968.601866	0.57726	0.00028015	-0.38029	-0.00018456	0.19697	9.5591E-05	485.3078756488088	16.562	0.32374	16.075	15.959	16.283	-0.48718					10	6	2	0	0	0	0.55097	1	145	145		49.442	5.3247	1	318290			2895	6169	1930	1933	3352	3352					0.11630923719621933
ATPKKTVPK	9	Unmodified	_ATPKKTVPK_					0	0	0		ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.30828857421875	2	485.30821	968.601866	0.11808	5.7303E-05	0.03528	1.7122E-05	0.15336	7.4425E-05	485.30812319263094	16.548	0.22868	15.95	15.832	16.06	-0.59873					10	4	3	0	0	0	0.26953	1	148	148		67.494	8.7117	1	285000			2896	6169	1930	1933	3353	3353					0.11630923719621933
ATPLWVRAPLK	11	Unmodified	_ATPLWVRAPLK_					0	0	0			REV__nc|ENSG00000143393|Q9UBF8-3|PI4KB	REV__nc|ENSG00000143393|Q9UBF8-3|PI4KB	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3798217773438	2	626.38224	1250.74993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115	1	114.94	114.44	115.44	-0.05722								0	0	0	0.56276	1	12315	12315		23.523	3.5259	1		+		2897	19806	1931	1934	3354	3354					0.13458234973427352
ATPPPVIAPR	10	Unmodified	_ATPPPVIAPR_					0	0	0		ENSG00000149269|ENST00000356341|PAK1;nc|ENSG00000149269|Q13153-2|PAK1;ENST00000533568.5_1_11:77069900-77103583:-|nuORF	ENSG00000149269|ENST00000356341|PAK1	ENSG00000149269|ENST00000356341|PAK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8050537109375	2	509.805834	1017.59712	-1.583	-0.00080704	-1.6708	-0.0008518	-3.2539	-0.0016588	509.80484162681256	99.325	0.8737	99.51	99.157	100.03	0.18582					48	20	3	0	0	0	0.80179	1	10271	10271		39.253	5.0803	1	244060			2898	5012	1932	1935	3355	3355					0.08902039576844345
ATPPQQRKK	9	Unmodified	_ATPPQQRKK_					0	0	0			REV__ENST00000420509.1_1_2:206950883-206951051:+|nuORF	REV__ENST00000420509.1_1_2:206950883-206951051:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3097534179688	2	527.311815	1052.60908	0.29221	0.00015408	-1.3979	-0.00073715	-1.1057	-0.00058307	527.3109426709796	80.891	0.85687	81.312	80.891	81.748	0.4215					62	20	4	0	0	0	0.74721	1	9334	9334		37.159	3.2375	1	2260400	+		2899	26486	1933	1936	3356	3356					0.08487656320039605
ATPQPVVL	8	Unmodified	_ATPQPVVL_					0	0	0		ENST00000484252.5_1_2:128397991-128398141:-|nuORF	ENST00000484252.5_1_2:128397991-128398141:-|nuORF	ENST00000484252.5_1_2:128397991-128398141:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.74615478515625	2	412.747453	823.480354	-0.18726	-7.729E-05	-2.5941	-0.0010707	-2.7813	-0.001148	412.74629807731793	85.159	3.9764	85.226	83.424	87.4	0.067261					139	91	3	0	0	0	0.90465	1	8544	8544		40.573	1.7665	1	1290300			2900	12532	1934	1937	3357	3357					0.06155301357091503
ATPTGPAAN	9	Unmodified	_ATPTGPAAN_					0	0	0		nc|ENSG00000128283|Q00587-2|CDC42EP1;ENSG00000128283|ENST00000249014|CDC42EP1	nc|ENSG00000128283|Q00587-2|CDC42EP1	nc|ENSG00000128283|Q00587-2|CDC42EP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2006530761719	2	400.200867	798.387182	1.235	0.00049424	-3.6984	-0.0014801	-2.4635	-0.00098588	400.2007500976596	65.261	1.216	65.647	64.776	65.992	0.38615					58	31	3	0	0	0	0.55097	1	7015	7015		49.442	1.5259	1	302440			2901	3535	1935	1938	3358	3358					-0.020076230961535657
ATPTTYGT	8	Unmodified	_ATPTTYGT_					0	0	0			REV__ENST00000483415.5_1_22:29664325-29684776:+|nuORF	REV__ENST00000483415.5_1_22:29664325-29684776:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2485046386719	2	406.195251	810.375948	0.62317	0.00025313	2.2478	0.00091306	2.871	0.0011662	406.19606563839585	88.407	0.43912	88.557	88.445	88.884	0.15054					17	10	2	0	0	0	0.4196	1	8773	8773		42.474	0	1	58800	+		2902	22560	1936	1939	3359	3359					-0.03682445190281669
ATPVLPLT	8	Unmodified	_ATPVLPLT_					0	0	0			REV__ENSG00000196531|ENST00000454682|NACA	REV__ENSG00000196531|ENST00000454682|NACA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2477722167969	2	406.249829	810.485105	-1.9277	-0.00078311	-1.0996	-0.00044672	-3.0273	-0.0012298	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.7961	1	8904	8904		17.365	0	1	31099000	+		2903	23140	1937	1940	3360	3360					0.07228185499855044
ATPVPLLARTG	11	Unmodified	_ATPVPLLARTG_					0	0	0			REV__ENST00000482850.1_1_17:19281831-19284064:+|nuORF	REV__ENST00000482850.1_1_17:19281831-19284064:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.6264038085938	2	548.329673	1094.64479	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.795	1	67.855	67.355	68.355	0.059288								0	0	0	0.56276	1	6056	6056		28.081	4.5588	1		+		2904	27476	1938	1941	3361	3361					0.10125693777035849
ATQAPNFV	8	Unmodified	_ATQAPNFV_					0	0	0			REV__ENSG00000118491|ENST00000237275|ZC2HC1B	REV__ENSG00000118491|ENST00000237275|ZC2HC1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.21826171875	2	424.21906	846.423567	2.8621	0.0012142	-4.1607	-0.001765	-1.2985	-0.00055086	424.2172299005605	101.48	1.8959	101.53	100.85	102.75	0.044823					89	45	3	0	0	0	0.92457	1	10943	10943		47.916	5.5195	1	2047000	+		2905	18315	1939	1942	3362	3362					-0.005787461994259502
ATQEKLLLAVR	11	Unmodified	_ATQEKLLLAVR_					0	0	0			REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.3832397460938	2	621.382437	1240.75032	0.89064	0.00055343	0.12299	7.6425E-05	1.0136	0.00062986	621.3824533727919	18.116	0.69889	17.639	17.425	18.124	-0.47694					28	14	3	0	0	0	0.63837	1	353	353		37.508	0	1	515430	+		2906	16949	1940	1943	3363	3363					0.13957609902649892
ATQGVHLWDLQ	11	Unmodified	_ATQGVHLWDLQ_					0	0	0		nc|ENSG00000162923|Q9H7D7-2|WDR26;nc|ENSG00000162923|Q9H7D7|WDR26;ENSG00000162923|ENST00000414423|WDR26;ENST00000479727.1_1_1:224585697-224586694:-|nuORF;ENST00000486652.5_1_1:224577539-224589708:-|nuORF	nc|ENSG00000162923|Q9H7D7-2|WDR26	nc|ENSG00000162923|Q9H7D7-2|WDR26	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.3255004882812	2	634.325119	1266.63569	-0.64623	-0.00040992	0.75695	0.00048015	0.11072	7.0233E-05	634.3256591213016	59.511	1.0707	59.511	59.145	60.216	0					116	43	4	0	0	0	0.26196	1	5204	5204		76.17	3.2904	1	1731800			2907	5749	1941	1944	3364	3364					0.013033004207045451
ATQGVHLWDLQ	11	Unmodified	_ATQGVHLWDLQ_					0	0	0		nc|ENSG00000162923|Q9H7D7-2|WDR26;nc|ENSG00000162923|Q9H7D7|WDR26;ENSG00000162923|ENST00000414423|WDR26;ENST00000479727.1_1_1:224585697-224586694:-|nuORF;ENST00000486652.5_1_1:224577539-224589708:-|nuORF	nc|ENSG00000162923|Q9H7D7-2|WDR26	nc|ENSG00000162923|Q9H7D7-2|WDR26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3248901367188	2	634.325119	1266.63569	-0.14098	-8.9429E-05	0.072529	4.6007E-05	-0.068454	-4.3422E-05	634.325157778093	59.492	2.055	59.479	58.833	60.888	-0.013729					119	56	4	0	0	0	0.13035	2	5453	5434;5453		85.862	9.0877	1	2671900			2908	5749	1941	1944	3365;3366	3366					0.013033004207045451
ATQGVHLWDLQ	11	Unmodified	_ATQGVHLWDLQ_					0	0	0		nc|ENSG00000162923|Q9H7D7-2|WDR26;nc|ENSG00000162923|Q9H7D7|WDR26;ENSG00000162923|ENST00000414423|WDR26;ENST00000479727.1_1_1:224585697-224586694:-|nuORF;ENST00000486652.5_1_1:224577539-224589708:-|nuORF	nc|ENSG00000162923|Q9H7D7-2|WDR26	nc|ENSG00000162923|Q9H7D7-2|WDR26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.3251342773438	2	634.325119	1266.63569	0.1237	7.8469E-05	-0.22265	-0.00014123	-0.098947	-6.2765E-05	634.325003697221	59.4	2.1536	59.369	58.786	60.939	-0.030888					122	59	4	0	0	0	0.05483	3	5564	5552;5564;5576		101.25	16.092	1	2917300			2909	5749	1941	1944	3367;3368;3369	3368					0.013033004207045451
ATQGVHLWDLQ	11	Unmodified	_ATQGVHLWDLQ_					0	0	0		nc|ENSG00000162923|Q9H7D7-2|WDR26;nc|ENSG00000162923|Q9H7D7|WDR26;ENSG00000162923|ENST00000414423|WDR26;ENST00000479727.1_1_1:224585697-224586694:-|nuORF;ENST00000486652.5_1_1:224577539-224589708:-|nuORF	nc|ENSG00000162923|Q9H7D7-2|WDR26	nc|ENSG00000162923|Q9H7D7-2|WDR26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3255004882812	2	634.325119	1266.63569	-0.43105	-0.00027343	0.46525	0.00029512	0.0342	2.1694E-05	634.3254652292756	59.323	2.4593	59.357	58.521	60.98	0.033905					136	70	4	0	0	0	0.13035	2	5501	5501;5514		85.862	10.819	1	3076800			2910	5749	1941	1944	3370;3371	3370					0.013033004207045451
ATQGVHLWDLQ	11	Unmodified	_ATQGVHLWDLQ_					0	0	0		nc|ENSG00000162923|Q9H7D7-2|WDR26;nc|ENSG00000162923|Q9H7D7|WDR26;ENSG00000162923|ENST00000414423|WDR26;ENST00000479727.1_1_1:224585697-224586694:-|nuORF;ENST00000486652.5_1_1:224577539-224589708:-|nuORF	nc|ENSG00000162923|Q9H7D7-2|WDR26	nc|ENSG00000162923|Q9H7D7-2|WDR26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3259887695312	2	634.325119	1266.63569	0.5602	0.00035535	-0.34411	-0.00021828	0.21609	0.00013707	634.3248294256873	59.288	1.3651	59.402	58.945	60.31	0.11396					111	43	4	0	0	0	0.1837	3	5063	5063;5072;5104		80.455	16.921	1	2141400			2911	5749	1941	1944	3372;3373;3374	3372					0.013033004207045451
ATQGVHLWDLQ	11	Unmodified	_ATQGVHLWDLQ_					0	0	0		nc|ENSG00000162923|Q9H7D7-2|WDR26;nc|ENSG00000162923|Q9H7D7|WDR26;ENSG00000162923|ENST00000414423|WDR26;ENST00000479727.1_1_1:224585697-224586694:-|nuORF;ENST00000486652.5_1_1:224577539-224589708:-|nuORF	nc|ENSG00000162923|Q9H7D7-2|WDR26	nc|ENSG00000162923|Q9H7D7-2|WDR26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3250122070312	2	634.325119	1266.63569	-0.16269	-0.0001032	0.20488	0.00012996	0.042185	2.6759E-05	634.3251860671769	59.374	1.1226	59.374	59.025	60.147	0.00051117					97	36	4	0	0	0	0.1837	2	5093	5066;5093		80.455	8.7546	1	1865700			2912	5749	1941	1944	3375;3376	3376					0.013033004207045451
ATQRRWKTRRN	11	Unmodified	_ATQRRWKTRRN_					0	0	0			REV__chr2:74515870-74515973|27|22.3|0.56|5.32|+|1|TLX2,TLX2|1	REV__chr2:74515870-74515973|27|22.3|0.56|5.32|+|1|TLX2,TLX2|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.18603515625	3	491.61503	1471.82326	-0.18757	-9.2211E-05	-3.1943	-0.0015703	-3.3818	-0.0016626	491.94773999331863	64.599	0.42648	64.565	64.337	64.763	-0.034248					16	10	2	0	0	0	0.17835	1	6140	6140		21.78	10.326	1	55614	+		2913	15767	1942	1945	3377	3377					0.1062217646863246
ATRKLPHF	8	Unmodified	_ATRKLPHF_					0	0	0		nc|ENSG00000172478|Q08AI8-3|MAB21L4;nc|ENSG00000172478|Q08AI8-2|MAB21L4;ENSG00000172478|ENST00000388934|MAB21L4	nc|ENSG00000172478|Q08AI8-3|MAB21L4	nc|ENSG00000172478|Q08AI8-3|MAB21L4	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2868957519531	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.691	1	41.695	41.195	42.195	0.0043983								0	0	0	0.29694	1	2745	2745		37.028	1.8278	1				2914	6772	1943	1946	3378	3378					0.07004903608174118
ATRRLRAL	8	Unmodified	_ATRRLRAL_					0	0	0		ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.30438232421875	2	478.809242	955.603932	-2.2401	-0.0010726	1.6907	0.00080951	-0.54947	-0.00026309	478.81133412030596	60.113	0.79904	60.146	59.514	60.313	0.032825					25	20	2	0	0	0	0.91472	1	5562	5562		44.117	1.7207	1	60656			2915	10765	1944	1947	3379	3379					0.12435397248077606
ATRRPVGVA	9	Unmodified	_ATRRPVGVA_					0	0	0			REV__ENST00000206595.10_1_14:31028388-31028445:+|nuORF	REV__ENST00000206595.10_1_14:31028388-31028445:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7791442871094	2	463.780151	925.545748	-2.226	-0.0010324	-1.7375	-0.00080582	-3.9635	-0.0018382	463.77924988782166	40.526	1.7931	40.918	39.408	41.202	0.39209					79	45	2	0	0	0	0.77244	1	3351	3351		32.812	0.85756	1	9649600	+		2916	24107	1945	1948	3380	3380					0.079997156028071
ATRRPVSL	8	Unmodified	_ATRRPVSL_					0	0	0		ENSG00000173894|ENST00000310942|CBX2	ENSG00000173894|ENST00000310942|CBX2	ENSG00000173894|ENST00000310942|CBX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27392578125	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.8347	1	9918	9918		23.042	1.0826	1	47650000			2917	6895	1946	1949	3381	3381					0.08152313228526964
ATRRPVSL	8	Unmodified	_ATRRPVSL_					0	0	0		ENSG00000173894|ENST00000310942|CBX2	ENSG00000173894|ENST00000310942|CBX2	ENSG00000173894|ENST00000310942|CBX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2741394042969	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.87479	1	10225	10225		30.504	1.3541	1	51820000			2918	6895	1946	1949	3382	3382					0.08152313228526964
ATRRPVSL	8	Unmodified	_ATRRPVSL_					0	0	0		ENSG00000173894|ENST00000310942|CBX2	ENSG00000173894|ENST00000310942|CBX2	ENSG00000173894|ENST00000310942|CBX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.27398681640625	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.86677	1	9992	9992		27.882	3.6795	1	51698000			2919	6895	1946	1949	3383	3383					0.08152313228526964
ATRRPVSL	8	Unmodified	_ATRRPVSL_					0	0	0		ENSG00000173894|ENST00000310942|CBX2	ENSG00000173894|ENST00000310942|CBX2	ENSG00000173894|ENST00000310942|CBX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2744445800781	2	450.274701	898.534849	-1.7763	-0.00079984	1.0964	0.00049366	-0.67999	-0.00030618	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.8347	1	9490	9490		23.042	0	1	35178000			2920	6895	1946	1949	3384	3384					0.08152313228526964
ATRRPVSL	8	Unmodified	_ATRRPVSL_					0	0	0		ENSG00000173894|ENST00000310942|CBX2	ENSG00000173894|ENST00000310942|CBX2	ENSG00000173894|ENST00000310942|CBX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.27398681640625	2	450.274701	898.534849	-1.7763	-0.00079983	1.9054	0.00085797	0.12912	5.8138E-05	450.2754829150514	95.155	2.0569	95.357	94.777	96.834	0.20242					114	48	3	0	0	0	0.81897	1	9738	9738		20.947	0	1	856850			2921	6895	1946	1949	3385	3385					0.08152313228526964
ATRTTILV	8	Unmodified	_ATRTTILV_					0	0	0			REV__nc|ENSG00000064933|P54277-2|PMS1	REV__nc|ENSG00000064933|P54277-2|PMS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77081298828125	2	437.77146	873.528367	-1.7749	-0.000777	0.95051	0.0004161	-0.82439	-0.00036089	437.7717830608177	42.434	1.7664	42.867	42.22	43.986	0.4334					93	43	3	0	0	0	0.79929	1	3808	3808		18.324	0.95945	1	1098100	+		2922	16486	1947	1950	3386	3386					0.0865437527713766
ATRVEGAYR	9	Unmodified	_ATRVEGAYR_					0	0	0			REV__nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4	REV__nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.8207092285156	2	511.772522	1021.53049	0.37861	0.00019376	2.6511	0.0013568	3.0298	0.0015505	511.77313519619577	77.715	0.48941	78.284	78.012	78.502	0.56836					15	11	2	0	0	0	0.20789	1	8864	8864		49.536	0	1	68759	+		2923	23831	1948	1951	3387	3387					0.020588040149505105
ATRVIKLAH	9	Unmodified	_ATRVIKLAH_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.8175964355469	2	504.819276	1007.624	1.3418	0.00067735	-4.2381	-0.0021395	-2.8963	-0.0014621	504.8170047325148	99.257	0.71672	99.619	99.369	100.09	0.36136					43	17	3	0	0	0	0.7932	1	11983	11983		25.574	0.12388	1	986030			2924	2649	1949	1952	3388	3388					0.12049148188020808
ATRVNVVKG	9	Unmodified	_ATRVNVVKG_					0	0	0			REV__ENST00000604504.5_1_19:35607238-35610445:+|nuORF	REV__ENST00000604504.5_1_19:35607238-35610445:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.28790283203125	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.78536	1	11595	11595		29.15	0	1	24731000	+		2925	29357	1950	1953	3389	3389					0.08748582400005489
ATRVRDLL	8	Unmodified	_ATRVRDLL_					0	0	0			REV__ENSG00000184363|ENST00000331563|PKP3	REV__ENSG00000184363|ENST00000331563|PKP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28759765625	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.85277	1	12930	12930		25.45	4.5032	1	3080300	+		2926	22668	1951	1954	3390	3390					0.08748582400005489
ATSAKILRN	9	Unmodified	_ATSAKILRN_					0	0	0		nc|ENSG00000122335|Q96JX3-3|SERAC1;ENST00000607742.5_1_6:158538757-158579378:-|nuORF;nc|ENSG00000122335|Q96JX3-2|SERAC1;ENSG00000122335|ENST00000647468|SERAC1	nc|ENSG00000122335|Q96JX3-3|SERAC1	nc|ENSG00000122335|Q96JX3-3|SERAC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.29266357421875	2	487.293091	972.571629	-0.95487	-0.0004653	1.1127	0.0005422	0.1578	7.6897E-05	487.2935206291715	91.355	2.0771	91.355	90.861	92.938	0					114	48	4	0	0	0	0.7932	1	8954	8954		23.042	0	1	1437600			2927	3219	1952	1955	3391	3391					0.08424565054417599
ATSLLVPLL	9	Unmodified	_ATSLLVPLL_					0	0	0			REV__ENST00000558780.5_2_14:24649650-24651621:-|nuORF	REV__ENST00000558780.5_2_14:24649650-24651621:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8007507324219	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3107	3107		18.324	0	1	942760	+		2928	23136	1953	1956	3392	3392					0.11905003113804469
ATSSSSSGQ	9	Unmodified	_ATSSSSSGQ_					0	0	0		ENSG00000103184|ENST00000251170|SEC14L5	ENSG00000103184|ENST00000251170|SEC14L5	ENSG00000103184|ENST00000251170|SEC14L5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.17584228515625	2	406.175047	810.33554	2.4718	0.001004	-1.455	-0.000591	1.0168	0.00041301	406.17475072554515	96.427	1.6527	96.832	96.34	97.993	0.40498					89	39	4	0	0	0	0.76255	1	11573	11573		35.618	1.4457	1	1443200			2929	2060	1954	1957	3393	3393					-0.07721411580689619
ATTLKNRPL	9	Unmodified	_ATTLKNRPL_					0	0	0		nc|ENSG00000169129|Q8N4X5-3|AFAP1L2;ENST00000491814.1_1_10:116056685-116061337:-|nuORF;nc|ENSG00000169129|Q8N4X5-2|AFAP1L2;ENSG00000169129|ENST00000304129|AFAP1L2;nc|ENSG00000169129|Q8N4X5-4|AFAP1L2	nc|ENSG00000169129|Q8N4X5-3|AFAP1L2	nc|ENSG00000169129|Q8N4X5-3|AFAP1L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.30853271484375	2	507.308741	1012.60293	-0.73911	-0.00037496	0.84418	0.00042826	0.10507	5.3304E-05	507.3090651329104	28.358	0.65179	28.261	27.974	28.626	-0.096947					38	15	3	0	0	0	0.55097	1	1722	1722		49.442	7.0454	1	309510			2930	6472	1955	1958	3394	3394					0.0971313808852301
ATTLKNRPL	9	Unmodified	_ATTLKNRPL_					0	0	0		nc|ENSG00000169129|Q8N4X5-3|AFAP1L2;ENST00000491814.1_1_10:116056685-116061337:-|nuORF;nc|ENSG00000169129|Q8N4X5-2|AFAP1L2;ENSG00000169129|ENST00000304129|AFAP1L2;nc|ENSG00000169129|Q8N4X5-4|AFAP1L2	nc|ENSG00000169129|Q8N4X5-3|AFAP1L2	nc|ENSG00000169129|Q8N4X5-3|AFAP1L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.30804443359375	2	507.308741	1012.60293	1.7512	0.00088841	-1.6339	-0.00082888	0.11735	5.9535E-05	507.3077698105232	28.448	0.69688	28.275	27.934	28.631	-0.17336					37	17	3	0	0	0	0.77244	1	1757	1757		32.812	1.2826	1	310230			2931	6472	1955	1958	3395	3395					0.0971313808852301
ATTRRRAR	8	Unmodified	_ATTRRRAR_					0	0	0			REV__ENSG00000214107|ENST00000397548|MAGEB1	REV__ENSG00000214107|ENST00000397548|MAGEB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3009033203125	2	494.299573	986.584593	-0.58723	-0.00029027	2.8494	0.0014085	2.2622	0.0011182	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.87479	1	10228	10228		30.504	2.2494	1	65263000	+		2932	23647	1956	1959	3396	3396					0.09076440957176146
ATVAVPLVGK	10	Unmodified	_ATVAVPLVGK_					0	0	0		nc|ENSG00000136986|Q9BUN8-2|DERL1;ENSG00000136986|ENST00000259512|DERL1	nc|ENSG00000136986|Q9BUN8-2|DERL1	nc|ENSG00000136986|Q9BUN8-2|DERL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.80194091796875	2	477.80276	953.590967	0.80048	0.00038247	-0.89821	-0.00042917	-0.097733	-4.6697E-05	477.8021374235212	50.741	0.906	51.188	50.682	51.588	0.4476					52	21	3	0	0	0	0.23822	4	4989	4989;5001;5012;5024		79.713	19.594	1	957760			2933	4166	1957	1960	3397;3398;3399;3400	3397					0.11231521345337114
ATVAVPLVGK	10	Unmodified	_ATVAVPLVGK_					0	0	0		nc|ENSG00000136986|Q9BUN8-2|DERL1;ENSG00000136986|ENST00000259512|DERL1	nc|ENSG00000136986|Q9BUN8-2|DERL1	nc|ENSG00000136986|Q9BUN8-2|DERL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.80218505859375	2	477.80276	953.590967	0.017832	8.52E-06	0.077815	3.718E-05	0.095646	4.57E-05	477.8025245816942	50.458	0.97669	51.21	50.841	51.818	0.75174					48	23	3	0	0	0	0.12096	4	4996	4973;4982;4996;5008		98.629	43.853	1	1001800			2934	4166	1957	1960	3401;3402;3403;3404	3403					0.11231521345337114
ATVHVRVN	8	Unmodified	_ATVHVRVN_					0	0	0		nc|ENSG00000139182|Q9BQT9-2|CLSTN3;ENSG00000139182|ENST00000266546|CLSTN3	nc|ENSG00000139182|Q9BQT9-2|CLSTN3	nc|ENSG00000139182|Q9BQT9-2|CLSTN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.2589416503906	2	448.259051	894.503549	0.30626	0.00013729	-0.27451	-0.00012305	0.031752	1.4233E-05	448.2588270898945	89.76	2.8105	90.21	89.202	92.013	0.45058					113	70	4	0	0	0	0.86677	1	10587	10587		27.882	0	1	1731800			2935	14956	1958	1961	3405	3405					0.05207740194430244
ATVKLVSTG	9	Unmodified	_ATVKLVSTG_					0	0	0			REV__ENST00000502926.1_2_5:140806427-140807822:+|nuORF	REV__ENST00000502926.1_2_5:140806427-140807822:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2629699707031	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.7932	1	3261	3261		25.574	4.6271	1	4268300	+		2936	27831	1959	1962	3406	3406					0.07010669040244011
ATVLGNALVM	10	Unmodified	_ATVLGNALVM_					0	0	0		nc|ENSG00000101180|Q9Y5N1-3|HRH3;nc|ENSG00000101180|Q9Y5N1-4|HRH3;ENSG00000101180|ENST00000340177|HRH3;nc|ENSG00000101180|Q9Y5N1-2|HRH3;nc|ENSG00000101180|Q9Y5N1-5|HRH3;nc|ENSG00000101180|Q9Y5N1-6|HRH3;nc|ENSG00000101180|Q9Y5N1-7|HRH3	nc|ENSG00000101180|Q9Y5N1-3|HRH3	nc|ENSG00000101180|Q9Y5N1-3|HRH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.78021240234375	2	494.778428	987.542302	1.0619	0.0005254	2.8604	0.0014153	3.9223	0.0019407	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.77314	1	8839	8839		40.778	6.6056	1	657500			2937	1903	1960	1963	3407	3407					0.0480328471392113
ATVLKAVH	8	Unmodified	_ATVLKAVH_					0	0	0		ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60214444-60217453:-|nuORF	ENSG00000099821|ENST00000588649|POLRMT	ENSG00000099821|ENST00000588649|POLRMT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7740783691406	2	419.760895	837.507237	-1.9002	-0.00079761	3.9726	0.0016675	2.0725	0.00086994	419.7618156173068	41.114	0.17493	41.506	41.45	41.625	0.39209					6	4	2	0	0	0	0.4196	1	3561	3561		25.45	0	1	442190			2938	1769	1961	1964	3408	3408					0.08198409968269971
ATVLRIIMKAM	11	Unmodified	_ATVLRIIMKAM_					0	0	0			REV__ENSG00000068976|ENST00000164139|PYGM	REV__ENSG00000068976|ENST00000164139|PYGM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	623.8712158203125	2	623.872336	1245.73012	0.81494	0.00050842	-3.8725	-0.0024159	-3.0575	-0.0019075	623.869854859963	104.57	2.157	104.61	104.13	106.28	0.039856					135	51	4	0	0	0	0.69995	1	11439	11439		31.53	3.4483	1	1612700	+		2939	16572	1962	1965	3409	3409					0.11708399646840917
ATVLTGSRPN	10	Unmodified	_ATVLTGSRPN_					0	0	0			REV__nc|ENSG00000261934|Q9Y5G4-2|PCDHGA9	REV__nc|ENSG00000261934|Q9Y5G4-2|PCDHGA9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2798767089844	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.73395	1	8696	8696		42.864	6.4175	1	1954800	+		2940	23946	1963	1966	3410	3410					0.039116708121468946
ATVPEQRTVTL	11	Unmodified	_ATVPEQRTVTL_					0	0	0		nc|ENSG00000100150|O75140-5|DEPDC5;nc|ENSG00000100150|O75140-8|DEPDC5;nc|ENSG00000100150|O75140-4|DEPDC5;ENSG00000100150|ENST00000651528|DEPDC5;nc|ENSG00000100150|O75140-1|DEPDC5;nc|ENSG00000100150|O75140-9|DEPDC5	nc|ENSG00000100150|O75140-5|DEPDC5	nc|ENSG00000100150|O75140-5|DEPDC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5647277832031	3	405.562827	1213.66665	0.39528	0.00016031	4.3969	0.0017832	4.7922	0.0019435	405.56450530615757	63.272	1.3532	63.394	62.754	64.107	0.12253					138	58	3	0	0	0	0.7342	1	5561	5561		22.562	0	1	242080			2941	14808	1964	1967	3411	3411					0.06836453734968018
ATVTPSPVK	9	Unmodified	_ATVTPSPVK_					0	0	0		nc|ENSG00000069275|Q9H1E3-2|NUCKS1;ENSG00000069275|ENST00000367142|NUCKS1	nc|ENSG00000069275|Q9H1E3-2|NUCKS1	nc|ENSG00000069275|Q9H1E3-2|NUCKS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2637023925781	2	450.263468	898.512382	-1.6704	-0.00075212	2.2112	0.00099561	0.54079	0.0002435	450.26422275635036	29.694	0.8719	29.717	29.352	30.224	0.022985					48	19	4	0	0	0	0.24527	1	1882	1882		69.628	0.8408	1	347100			2942	1217	1965	1968	3412	3412					0.05906669040234647
ATVTPSPVK	9	Unmodified	_ATVTPSPVK_					0	0	0		nc|ENSG00000069275|Q9H1E3-2|NUCKS1;ENSG00000069275|ENST00000367142|NUCKS1	nc|ENSG00000069275|Q9H1E3-2|NUCKS1	nc|ENSG00000069275|Q9H1E3-2|NUCKS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2633056640625	2	450.263468	898.512382	0.39557	0.00017811	-0.049026	-2.2075E-05	0.34654	0.00015603	450.26326803543515	29.807	1.2073	29.718	29.191	30.398	-0.089544					38	27	2	0	0	0	0.096131	1	1918	1918		93.195	21.318	1	338790			2943	1217	1965	1968	3413	3413					0.05906669040234647
ATVTTRLI	8	Unmodified	_ATVTTRLI_					0	0	0			REV__ENST00000472558.6_1_12:6657673-6657703:-|nuORF	REV__ENST00000472558.6_1_12:6657673-6657703:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7703552246094	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.83646	1	2249	2249		12.207	0.69583	1	1151500	+		2944	27262	1966	1969	3414	3414					0.08654375277149029
ATVVLKSKFSA	11	Unmodified	_ATVVLKSKFSA_					0	0	0		nc|ENSG00000143554|Q5K4L6-2|SLC27A3;ENSG00000143554|ENST00000624995|SLC27A3;ENST00000468403.1_1_1:153750160-153750403:+|nuORF;ENST00000461269.1_1_1:153749094-153750403:+|nuORF;ENST00000484014.5_1_1:153748462-153751189:+|nuORF	nc|ENSG00000143554|Q5K4L6-2|SLC27A3	nc|ENSG00000143554|Q5K4L6-2|SLC27A3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8433227539062	2	575.845156	1149.67576	-0.46596	-0.00026832	-3.1419	-0.0018092	-3.6078	-0.0020776	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.55601	3	9086	8991;9086;9098		47.96	12.807	1	3411000			2945	4645	1967	1970	3415;3416;3417	3416					0.10690847091291289
ATVVLKSKFSA	11	Unmodified	_ATVVLKSKFSA_					0	0	0		nc|ENSG00000143554|Q5K4L6-2|SLC27A3;ENSG00000143554|ENST00000624995|SLC27A3;ENST00000468403.1_1_1:153750160-153750403:+|nuORF;ENST00000461269.1_1_1:153749094-153750403:+|nuORF;ENST00000484014.5_1_1:153748462-153751189:+|nuORF	nc|ENSG00000143554|Q5K4L6-2|SLC27A3	nc|ENSG00000143554|Q5K4L6-2|SLC27A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.843017578125	2	575.845156	1149.67576	-0.99796	-0.00057467	-2.8602	-0.001647	-3.8582	-0.0022217	575.8433464319414	90.672	2.8412	90.741	88.754	91.595	0.069328					215	67	4	0	0	0	0.62614	2	9319	9319;9331		41.427	7.2541	1	1885000			2946	4645	1967	1970	3418;3419	3418					0.10690847091291289
ATVVLKSKFSA	11	Unmodified	_ATVVLKSKFSA_					0	0	0		nc|ENSG00000143554|Q5K4L6-2|SLC27A3;ENSG00000143554|ENST00000624995|SLC27A3;ENST00000468403.1_1_1:153750160-153750403:+|nuORF;ENST00000461269.1_1_1:153749094-153750403:+|nuORF;ENST00000484014.5_1_1:153748462-153751189:+|nuORF	nc|ENSG00000143554|Q5K4L6-2|SLC27A3	nc|ENSG00000143554|Q5K4L6-2|SLC27A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8430786132812	2	575.845156	1149.67576	-0.99734	-0.00057431	-2.9254	-0.0016846	-3.9227	-0.0022589	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.68532	1	9742	9742		33.922	1.9668	1	5638300			2947	4645	1967	1970	3420	3420					0.10690847091291289
ATVVLKSKFSA	11	Unmodified	_ATVVLKSKFSA_					0	0	0		nc|ENSG00000143554|Q5K4L6-2|SLC27A3;ENSG00000143554|ENST00000624995|SLC27A3;ENST00000468403.1_1_1:153750160-153750403:+|nuORF;ENST00000461269.1_1_1:153749094-153750403:+|nuORF;ENST00000484014.5_1_1:153748462-153751189:+|nuORF	nc|ENSG00000143554|Q5K4L6-2|SLC27A3	nc|ENSG00000143554|Q5K4L6-2|SLC27A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8426513671875	2	575.845156	1149.67576	0.60609	0.00034901	-4.3948	-0.0025308	-3.7888	-0.0021817	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.69248	1	8990	8990		32.751	7.1765	1	2381900			2948	4645	1967	1970	3421	3421					0.10690847091291289
ATVVLKSKFSA	11	Unmodified	_ATVVLKSKFSA_					0	0	0		nc|ENSG00000143554|Q5K4L6-2|SLC27A3;ENSG00000143554|ENST00000624995|SLC27A3;ENST00000468403.1_1_1:153750160-153750403:+|nuORF;ENST00000461269.1_1_1:153749094-153750403:+|nuORF;ENST00000484014.5_1_1:153748462-153751189:+|nuORF	nc|ENSG00000143554|Q5K4L6-2|SLC27A3	nc|ENSG00000143554|Q5K4L6-2|SLC27A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8429565429688	2	575.845156	1149.67576	-1.368	-0.00078773	-2.557	-0.0014725	-3.925	-0.0022602	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.68532	3	9310	9310;9395;9419		33.922	4.9414	1	6121300			2949	4645	1967	1970	3422;3423;3424	3422					0.10690847091291289
ATWTLPGR	8	Unmodified	_ATWTLPGR_					0	0	0		ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.7502746582031	2	451.248152	900.481751	-0.97999	-0.00044222	2.5923	0.0011698	1.6123	0.00072755	451.24921015554173	65.724	1.4568	65.769	65.089	66.546	0.045113					104	74	2	0	0	0	0.91005	1	5836	5836		42.474	1.9018	1	906430			2950	7762	1968	1971	3425	3425					0.02752935445857929
ATYETKESK	9	Unmodified	_ATYETKESK_					0	0	0		ENSG00000172757|ENST00000308162|CFL1;nc|ENSG00000165410|Q9Y281-3|CFL2;ENSG00000165410|ENST00000298159|CFL2;ENST00000530945.1_1_11:65623404-65625570:-|nuORF	ENSG00000172757|ENST00000308162|CFL1	ENSG00000172757|ENST00000308162|CFL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.764404296875	2	528.764029	1055.5135	1.0855	0.00057397	-1.3071	-0.00069115	-0.22161	-0.00011718	528.7632565284684	17.098	0.45142	16.615	16.493	16.944	-0.48256					11	9	2	0	0	0	0.54908	1	219	219		49.536	1.8787	1	191970			2951	6791	1969	1972	3426	3426					-0.012031613815224773
ATYETKESK	9	Unmodified	_ATYETKESK_					0	0	0		ENSG00000172757|ENST00000308162|CFL1;nc|ENSG00000165410|Q9Y281-3|CFL2;ENSG00000165410|ENST00000298159|CFL2;ENST00000530945.1_1_11:65623404-65625570:-|nuORF	ENSG00000172757|ENST00000308162|CFL1	ENSG00000172757|ENST00000308162|CFL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7661743164062	2	528.764029	1055.5135	0.43523	0.00023013	-0.48117	-0.00025443	-0.045939	-2.4291E-05	528.7635937083112	17.112	0.27273	16.501	16.386	16.659	-0.6107					12	5	3	0	0	0	0.50922	2	217	217;229		51.528	17.355	1	204360			2952	6791	1969	1972	3427;3428	3427					-0.012031613815224773
ATYGKPVHH	9	Unmodified	_ATYGKPVHH_					0	0	0		nc|ENSG00000174748|P61313-2|RPL15;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENSG00000174748|ENST00000307839|RPL15	nc|ENSG00000174748|P61313-2|RPL15	nc|ENSG00000174748|P61313-2|RPL15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.2640075683594	2	505.264333	1008.51411	0.37146	0.00018769	-0.63236	-0.00031951	-0.26089	-0.00013182	505.2638876254135	17.537	0.66119	17.055	16.851	17.512	-0.48256					34	14	4	0	0	0	0.33718	1	268	268		62.107	8.756	1	1133500			2953	6961	1970	1973	3429	3429					0.01019722848843685
ATYGKPVHH	9	Unmodified	_ATYGKPVHH_					0	0	0		nc|ENSG00000174748|P61313-2|RPL15;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENSG00000174748|ENST00000307839|RPL15	nc|ENSG00000174748|P61313-2|RPL15	nc|ENSG00000174748|P61313-2|RPL15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.2641906738281	2	505.264333	1008.51411	0.92957	0.00046968	-1.3877	-0.00070114	-0.4581	-0.00023146	505.2635322376317	17.662	0.6595	17.051	16.798	17.457	-0.6107					40	16	4	0	0	0	0.28163	2	292	284;292		66.429	14.13	1	1313300			2954	6961	1970	1973	3430;3431	3431					0.01019722848843685
ATYLSRKGDYV	11	Unmodified	_ATYLSRKGDYV_					0	0	0			REV__ENSG00000126070|ENST00000373191|AGO3	REV__ENSG00000126070|ENST00000373191|AGO3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.30584716796875	3	424.890944	1271.651	0.4418	0.00018772	4.0149	0.0017059	4.4567	0.0018936	424.8919649802089	26.406	1.6497	26.451	25.388	27.038	0.045507					67	54	2	0	0	0	0.17365	1	1054	1054		11.455	2.2428	1	49570	+		2955	18694	1971	1974	3432	3432					0.02604167217896247
ATYLSRKGDYV	11	Unmodified	_ATYLSRKGDYV_					0	0	0			REV__ENSG00000126070|ENST00000373191|AGO3	REV__ENSG00000126070|ENST00000373191|AGO3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	424.890944	1271.651	-0.36163	-0.00015365	4.5017	0.0019127	4.1401	0.0017591	424.89245736103766	26.4	1.462	26.361	25.438	26.9	-0.038523	-0.069449	0.0016563	NaN	11.455	44	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81664	+		2956	18694	1971	1974							0.02604167217896247
ATYLSRKGDYV	11	Unmodified	_ATYLSRKGDYV_					0	0	0			REV__ENSG00000126070|ENST00000373191|AGO3	REV__ENSG00000126070|ENST00000373191|AGO3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	424.890944	1271.651	2.4343	0.0010343	1.3271	0.00056387	3.7614	0.0015982	424.8911020073703	26.512	1.1145	26.479	25.815	26.929	-0.032125	0.0487	-0.0023903	NaN	11.455	37	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71089	+		2957	18694	1971	1974							0.02604167217896247
AVAALLLLLL	10	Unmodified	_AVAALLLLLL_					0	0	0			REV__ENSG00000136770|ENST00000376980|DNAJC1	REV__ENSG00000136770|ENST00000376980|DNAJC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3157653808594	2	505.354628	1008.6947	0.19349	9.7783E-05	-1.9122	-0.00096634	-1.7187	-0.00086855	505.35386686309374	58.992	0.40031	58.961	58.786	59.186	-0.030888					21	12	2	0	0	0	0.37624	1	5527	5527		19.36	0	1	47447	+		2958	19333	1972	1975	3433	3433					0.19070428452994292
AVAAPAYSR	9	Unmodified	_AVAAPAYSR_					0	0	0		ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.2464294433594	2	453.245609	904.476666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.934	1	83.934	83.434	84.434	0								0	0	0	0.31117	1	7893	7893		26.693	2.4902	1				2959	2284	1973	1976	3434	3434					0.02060631583231043
AVAARPLL	8	Unmodified	_AVAARPLL_					0	0	0			REV__ENST00000274000.9_2_4:113152930-113153059:+|nuORF	REV__ENST00000274000.9_2_4:113152930-113153059:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.565185546875	2	405.763438	809.512323	1.5498	0.00062885	-2.9788	-0.0012087	-1.429	-0.00057984	405.7623723843978	63.604	0.084496	63.631	63.6	63.684	0.027142					4	2	2	0	0	0	0.4196	1	5963	5963		1.619	0.1542	1	35222	+		2960	24561	1974	1977	3435	3435					0.09994713830894852
AVAEEEARKAH	11	Unmodified	_AVAEEEARKAH_					0	0	0		nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-4|IMMT;ENSG00000132305|ENST00000410111|IMMT	nc|ENSG00000132305|Q16891-3|IMMT	nc|ENSG00000132305|Q16891-3|IMMT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9295349121094	3	404.210676	1209.6102	-0.85802	-0.00034682	0.96317	0.00038932	0.10515	4.2501E-05	404.2105734236965	47.217	0.2371	47.19	47.027	47.264	-0.026737					9	6	2	0	0	0	0.17305	1	3922	3922		18.531	0	1	34325			2961	3778	1975	1978	3436	3436					0.013778258982711122
AVAEYSRV	8	Unmodified	_AVAEYSRV_					0	0	0			REV__ENSG00000173914|ENST00000310046|RBM4B	REV__ENSG00000173914|ENST00000310046|RBM4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7376708984375	2	447.737617	893.460681	-1.6918	-0.00075749	1.9358	0.00086674	0.244	0.00010925	447.73831786549874	30.443	1.1502	30.471	30.052	31.202	0.028618					60	25	4	0	0	0	0.60155	1	2014	2014		71.378	0	1	871910	+		2962	21962	1976	1979	3437	3437					0.009689253463420755
AVAIKAMAK	9	Unmodified	_AVAIKAMAK_					0	0	0		ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	ENSG00000132507|ENST00000336458|EIF5A	ENSG00000132507|ENST00000336458|EIF5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.778076171875	2	451.778231	901.541908	-1.2182	-0.00055037	1.2719	0.00057463	0.053702	2.4261E-05	451.77869133263124	27.386	1.3548	27.211	26.792	28.147	-0.17559					69	30	4	0	0	0	0.09311	4	1564	1554;1564;1576;1589		94.006	28.109	1	1806400			2963	3802	1977	1980	3438;3439;3440;3441	3439					0.08719909784724678
AVAIKAMAK	9	Unmodified	_AVAIKAMAK_					0	0	0		ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	ENSG00000132507|ENST00000336458|EIF5A	ENSG00000132507|ENST00000336458|EIF5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.7780456542969	2	451.778231	901.541908	1.4663	0.00066243	-1.6606	-0.00075023	-0.19434	-8.78E-05	451.77742947217075	27.437	1.507	27.182	26.811	28.318	-0.25465					78	35	4	0	0	0	0.062302	5	1588	1568;1578;1588;1600;1615		102.77	15.193	1	2203000			2964	3802	1977	1980	3442;3443;3444;3445;3446	3444					0.08719909784724678
AVAIWIQP	8	Unmodified	_AVAIWIQP_					0	0	0		ENST00000540430.5_1_11:18424437-18424488:+|nuORF	ENST00000540430.5_1_11:18424437-18424488:+|nuORF	ENST00000540430.5_1_11:18424437-18424488:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2502746582031	2	449.263271	896.511988	0.37591	0.00016888	2.5293	0.0011363	2.9052	0.0013052	449.26536251731767	31.267	0.30058	31.271	31.144	31.444	0.0037212					8	6	2	0	0	0	0.4196	1	2110	2110		29.842	3.0454	1	31527			2965	13496	1978	1981	3447	3447					0.05959294111039526
AVAKMLAK	8	Unmodified	_AVAKMLAK_					0	0	0			REV__nc|ENSG00000135047|P07711-3|CTSL	REV__nc|ENSG00000135047|P07711-3|CTSL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.2599792480469	2	416.259674	830.504795	0.19222	8.0012E-05	0.66212	0.00027562	0.85434	0.00035563	416.2597428980766	27.393	0.61468	27.217	26.926	27.54	-0.17559					27	13	3	0	0	0	0.91005	1	1572	1572		42.474	1.9018	1	229630	+		2966	19183	1979	1982	3448	3448					0.08276238238966016
AVAKMLAK	8	Unmodified	_AVAKMLAK_					0	0	0			REV__nc|ENSG00000135047|P07711-3|CTSL	REV__nc|ENSG00000135047|P07711-3|CTSL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.2598571777344	2	416.259674	830.504795	1.4914	0.00062082	-0.82375	-0.00034289	0.66766	0.00027792	416.25919141995917	27.429	0.82053	27.174	26.811	27.632	-0.25465					31	18	2	0	0	0	0.92973	1	1592	1592		50.025	4.0726	1	324790	+		2967	19183	1979	1982	3449	3449					0.08276238238966016
AVAKMLAK	8	Unmodified	_AVAKMLAK_					0	0	0			REV__nc|ENSG00000135047|P07711-3|CTSL	REV__nc|ENSG00000135047|P07711-3|CTSL	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	416.259674	830.504795	0.19222	8.0012E-05	0.66212	0.00027562	0.85434	0.00035563	416.2597428980766	27.393	0.61468	27.217	26.926	27.54	-0.17559	0.021351	0.00069053	NaN	50.025	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	229630	+		2968	19183	1979	1982							0.08276238238966016
AVAKMLAK	8	Unmodified	_AVAKMLAK_					0	0	0			REV__nc|ENSG00000135047|P07711-3|CTSL	REV__nc|ENSG00000135047|P07711-3|CTSL	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	416.259674	830.504795	1.4914	0.00062082	-0.82375	-0.00034289	0.66766	0.00027792	416.25919141995917	27.429	0.82053	27.174	26.811	27.632	-0.25465	-0.021351	-0.00054648	NaN	50.025	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	324790	+		2969	19183	1979	1982							0.08276238238966016
AVALFIRE	8	Unmodified	_AVALFIRE_					0	0	0			REV__nc|ENSG00000175894|Q8WU66-2|TSPEAR	REV__nc|ENSG00000175894|Q8WU66-2|TSPEAR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.7752685546875	2	459.774003	917.533452	-0.11372	-5.2287E-05	4.0317	0.0018537	3.918	0.0018014	459.7757031479285	20.873	0.86124	20.245	19.901	20.762	-0.62835					44	21	3	0	0	0	0.93786	2	698	698;710		53.351	7.3995	1	238860	+		2970	22089	1980	1983	3450;3451	3450					0.07138679139745818
AVALPLQTK	9	Unmodified	_AVALPLQTK_					0	0	0		ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1;ENSG00000171566|ENST00000499023|PLRG1	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7944030761719	2	470.794935	939.575317	-0.78	-0.00036722	0.14755	6.9466E-05	-0.63245	-0.00029775	470.7948980449829	46.006	0.76551	46.477	46.173	46.938	0.47139					47	18	4	0	0	0	0.12688	3	4309	4288;4297;4309		87.696	23.489	1	7840400			2971	6684	1981	1984	3452;3453;3454	3454					0.10311234828282068
AVALPLQTK	9	Unmodified	_AVALPLQTK_					0	0	0		ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1;ENSG00000171566|ENST00000499023|PLRG1	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.79486083984375	2	470.794935	939.575317	-1.2981	-0.00061112	0.84029	0.0003956	-0.45776	-0.00021551	470.7951790395644	45.812	0.83734	46.707	46.367	47.205	0.89542					51	20	4	0	0	0	0.096326	2	4297	4285;4297		93.143	24.356	1	6173100			2972	6684	1981	1984	3455;3456	3456					0.10311234828282068
AVALRAGWQQR	11	Unmodified	_AVALRAGWQQR_					0	0	0		ENSG00000132671|ENST00000255008|SSTR4	ENSG00000132671|ENST00000255008|SSTR4	ENSG00000132671|ENST00000255008|SSTR4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.8550415039062	2	628.354545	1254.69454	0.66323	0.00041674	3.5365	0.0022222	4.1998	0.0026389	628.3566872264779	15.76	0.18293	15.271	15.204	15.387	-0.48917					7	4	2	0	0	0	0.17385	1	43	43		32.812	1.2826	1	82806			2973	3818	1982	1985	3457	3457					0.07737821505679676
AVALVDSDN	9	Unmodified	_AVALVDSDN_					0	0	0			REV__nc|ENSG00000090512|Q9UGM5-2|FETUB	REV__nc|ENSG00000090512|Q9UGM5-2|FETUB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.2283935546875	2	452.224539	902.434526	4.5148	0.0020417	1.6899	0.0007642	6.2046	0.0028059	452.2261030001731	107	0.85062	107.15	106.81	107.66	0.14929					69	29	5	0	0	0	0.76764	1	13130	13130		34.173	2.2177	1	2327200	+		2974	16989	1983	1986	3458	3458					-0.020593886158053465
AVAQRKPRA	9	Unmodified	_AVAQRKPRA_					0	0	0		nc|ENSG00000185567|Q8IVF2-3|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2	nc|ENSG00000185567|Q8IVF2-3|AHNAK2	nc|ENSG00000185567|Q8IVF2-3|AHNAK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.24609375	2	498.8067	995.598846	0.030331	1.513E-05	-2.5194	-0.0012567	-2.4891	-0.0012416	498.805848781783	20.255	0.27464	19.626	19.443	19.718	-0.62961					6	5	2	0	0	0	0.20789	1	630	630		17.365	10.629	1	25861			2975	7725	1984	1987	3459	3459					0.10087093385459411
AVAQRKPRA	9	Unmodified	_AVAQRKPRA_					0	0	0		nc|ENSG00000185567|Q8IVF2-3|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2	nc|ENSG00000185567|Q8IVF2-3|AHNAK2	nc|ENSG00000185567|Q8IVF2-3|AHNAK2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	498.8067	995.598846	0.152	7.5821E-05	-5.5745	-0.0027806	-5.4225	-0.0027048	498.80367928836756	20.019	0.14004	19.549	19.444	19.584	-0.46967	-0.038147	-0.0019671	NaN	17.365	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15513			2976	7725	1984	1987							0.10087093385459411
AVARRKNWKKF	11	Unmodified	_AVARRKNWKKF_					0	0	0		ENST00000589009.5_1_19:10227257-10229639:-|nuORF;ENSG00000130811|ENST00000253108|EIF3G	ENST00000589009.5_1_19:10227257-10229639:-|nuORF	ENST00000589009.5_1_19:10227257-10229639:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.61810302734375	3	468.6176	1402.83097	0.23239	0.0001089	-0.41717	-0.00019549	-0.18478	-8.6591E-05	468.6173072299361	16.211	0.34229	15.723	15.571	15.913	-0.48718					16	7	3	0	0	0	0.76579	1	109	109		18.531	3.1979	1	130940			2977	3687	1985	1988	3460	3460					0.1456693573618395
AVARVARKVNE	11	Unmodified	_AVARVARKVNE_					0	0	0		nc|ENSG00000172731|Q8TCA0-3|LRRC20;nc|ENSG00000172731|Q8TCA0-2|LRRC20;ENSG00000172731|ENST00000446961|LRRC20	nc|ENSG00000172731|Q8TCA0-3|LRRC20	nc|ENSG00000172731|Q8TCA0-3|LRRC20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.91204833984375	3	404.910561	1211.70985	0.071013	2.8754E-05	3.4821	0.0014099	3.5531	0.0014387	404.91191633695087	30.689	1.6693	30.718	30.008	31.677	0.028618					77	37	4	0	0	0	0.71207	1	1994	1994		29.551	2.5034	1	1936500			2978	6788	1986	1989	3461	3461					0.11246688302912844
AVASWGPSLA	10	Unmodified	_AVASWGPSLA_					0	0	0			REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.7507629394531	2	479.753267	957.491981	-1.8721	-0.00089814	-2.3221	-0.001114	-4.1941	-0.0020122	479.75202472836827	31.259	0.37741	31.259	31.066	31.444	0					19	12	2	0	0	0	0.71042	1	1488	1488		44.117	10.601	1	49932	+		2979	30032	1987	1990	3462	3462					0.011534983804153853
AVDDRDFYY	9	Unmodified	_AVDDRDFYY_					0	0	0			REV__ENSG00000167996|ENST00000273550|FTH1	REV__ENSG00000167996|ENST00000273550|FTH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.2513427734375	2	582.253828	1162.4931	0.84515	0.00049209	-4.3704	-0.0025447	-3.5253	-0.0020526	582.2513600168936	34.842	1.6633	35.223	34.811	36.474	0.3812					134	42	4	0	0	0	0.74721	1	2627	2627		37.159	2.9866	1	1023800	+		2980	21447	1988	1991	3463	3463					-0.0816433204133773
AVDLPSPSH	9	Unmodified	_AVDLPSPSH_					0	0	0			REV__ENST00000468428.1_1_20:17594377-17594461:-|nuORF	REV__ENST00000468428.1_1_20:17594377-17594461:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.7352600097656	2	461.735074	921.455596	0.66231	0.00030581	-0.53789	-0.00024836	0.12442	5.7447E-05	461.73461810636286	32.744	0.63437	32.956	32.636	33.271	0.21168					33	14	3	0	0	0	0.64922	1	2330	2330		44.117	4.864	1	643540	+		2981	27184	1989	1992	3464	3464					-0.008273785162828062
AVDTDTFS	8	Unmodified	_AVDTDTFS_					0	0	0		ENST00000477274.1_1_X:153276255-153284091:-|nuORF;nc|ENSG00000184216|P51617-4|IRAK1;nc|ENSG00000184216|P51617-2|IRAK1;nc|ENSG00000184216|P51617-3|IRAK1;ENSG00000184216|ENST00000369980|IRAK1	ENST00000477274.1_1_X:153276255-153284091:-|nuORF	ENST00000477274.1_1_X:153276255-153284091:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.1887512207031	2	428.190165	854.365778	0.13282	5.6873E-05	-3.1465	-0.0013473	-3.0137	-0.0012904	428.18872922690895	94.107	1.8536	94.542	93.224	95.077	0.43539					86	46	2	0	0	0	0.86791	1	11209	11209		28.254	1.4582	1	1237400			2982	7592	1990	1993	3465	3465					-0.06723052915515382
AVDVPRLQ	8	Unmodified	_AVDVPRLQ_					0	0	0		nc|ENSG00000139445|Q96NZ1-2|FOXN4;ENSG00000139445|ENST00000299162|FOXN4	nc|ENSG00000139445|Q96NZ1-2|FOXN4	nc|ENSG00000139445|Q96NZ1-2|FOXN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2607727050781	2	449.261259	896.507966	-0.43537	-0.0001956	-1.0183	-0.0004575	-1.4537	-0.00065309	449.26067669224085	66.168	1.0089	66.554	66.153	67.162	0.38581					54	26	3	0	0	0	0.86288	1	7228	7228		26.796	2.5934	1	1011600			2983	4371	1991	1994	3466	3466					0.055572046173210765
AVEAARPR	8	Unmodified	_AVEAARPR_					0	0	0			REV__nc|nan|Q2M2W7-2|C17orf58	REV__nc|nan|Q2M2W7-2|C17orf58	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2514343261719	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87479	1	7811	7811		30.504	1.3541	1	2823900	+		2984	22872	1992	1995	3467	3467					0.048394536773685104
AVEAARPR	8	Unmodified	_AVEAARPR_					0	0	0			REV__nc|nan|Q2M2W7-2|C17orf58	REV__nc|nan|Q2M2W7-2|C17orf58	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2513427734375	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87479	1	7897	7897		30.504	1.3541	1	3370400	+		2985	22872	1992	1995	3468	3468					0.048394536773685104
AVEAARPR	8	Unmodified	_AVEAARPR_					0	0	0			REV__nc|nan|Q2M2W7-2|C17orf58	REV__nc|nan|Q2M2W7-2|C17orf58	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25152587890625	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.89043	2	9122	9122;9158		37.159	1.9584	1	2020200	+		2986	22872	1992	1995	3469;3470	3469					0.048394536773685104
AVEDKASPK	9	Unmodified	_AVEDKASPK_					0	0	0			REV__ENSG00000179695|ENST00000641202|OR6C2	REV__ENSG00000179695|ENST00000641202|OR6C2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7547302246094	2	472.756007	943.497461	0.52859	0.00024989	-0.37629	-0.00017789	0.1523	7.2002E-05	472.7557311192579	25.279	0.4759	25.303	25.048	25.524	0.024021					38	24	2	0	0	0	0.67345	1	907	907		42.396	8.2236	1	81508	+		2987	22349	1993	1996	3471	3471					0.023451771722307058
AVEGVGPRL	9	Unmodified	_AVEGVGPRL_					0	0	0		ENST00000574924.6_1_17:79849610-79851460:+|nuORF;ENST00000579978.5_1_17:79849598-79852367:+|nuORF	ENST00000574924.6_1_17:79849610-79851460:+|nuORF	ENST00000574924.6_1_17:79849610-79851460:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2603759765625	2	449.261259	896.507966	0.037787	1.6976E-05	-1.6093	-0.00072298	-1.5715	-0.000706	449.260464463793	72.138	1.197	72.688	72.279	73.476	0.55008					69	28	4	0	0	0	0.77546	1	8068	8068		31.955	1.4512	1	1304500			2988	14038	1994	1997	3472	3472					0.055572046173210765
AVEKRPSR	8	Unmodified	_AVEKRPSR_					0	0	0		ENSG00000105613|ENST00000251472|MAST1	ENSG00000105613|ENST00000251472|MAST1	ENSG00000105613|ENST00000251472|MAST1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.77593994140625	2	471.777608	941.540663	-0.41023	-0.00019354	0.4534	0.00021391	0.043171	2.0367E-05	471.77765730903536	17.083	0.4468	16.472	16.305	16.752	-0.6107					15	9	2	0	0	0	0.87479	1	224	224		30.504	0	1	77633			2989	2229	1995	1998	3473	3473					0.06755411740186901
AVFLKGFPL	9	Unmodified	_AVFLKGFPL_					0	0	0		ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	496.3050231933594	2	496.302396	990.590239	-0.5818	-0.00028875	3.668	0.0018204	3.0862	0.0015317	496.30410595026353	84.014	3.2455	84.179	83.276	86.522	0.1651					146	75	3	0	0	0	0.7932	1	8234	8234		25.45	4.9683	1	213760			2990	10510	1996	1999	3474	3474					0.09456726696282658
AVFLKGFPL	9	Unmodified	_AVFLKGFPL_					0	0	0		ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	496.302396	990.590239	-1.0029	-0.00049776	4.2842	0.0021263	3.2813	0.0016285	496.30441345290296	84.417	3.0946	84.417	83.509	86.604	0	-0.018925	0.00083367	NaN	25.45	132	72	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97295			2991	10510	1996	1999							0.09456726696282658
AVFLKGFPL	9	Unmodified	_AVFLKGFPL_					0	0	0		ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	496.302396	990.590239	0.85253	0.00042311	2.3551	0.0011689	3.2077	0.001592	496.30340447909066	84.47	3.757	84.4	83.323	87.08	-0.069786	-0.035775	-0.0010811	NaN	25.45	162	86	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178950			2992	10510	1996	1999							0.09456726696282658
AVFLKGFPL	9	Unmodified	_AVFLKGFPL_					0	0	0		ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	496.302396	990.590239	-0.8617	-0.00042767	4.002	0.0019862	3.1403	0.0015586	496.3042574912054	84.396	4.2689	84.456	82.732	87.001	0.05925	0.019651	0.00055359	NaN	25.45	195	98	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164130			2993	10510	1996	1999							0.09456726696282658
AVFLKGFPL	9	Unmodified	_AVFLKGFPL_					0	0	0		ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	496.302396	990.590239	0.65412	0.00032464	2.465	0.0012234	3.1191	0.001548	496.30353345008956	84.518	3.4309	84.666	82.969	86.4	0.14793	0.22973	-0.00097209	NaN	25.45	130	79	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188630			2994	10510	1996	1999							0.09456726696282658
AVFLKGFPL	9	Unmodified	_AVFLKGFPL_					0	0	0		ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	496.302396	990.590239	-1.5091	-0.00074895	4.5844	0.0022752	3.0753	0.0015263	496.3046081393129	84.402	3.0206	84.552	83.32	86.34	0.14951	0.11595	0.0011316	NaN	25.45	126	69	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134190			2995	10510	1996	1999							0.09456726696282658
AVFLKGFPL	9	Unmodified	_AVFLKGFPL_					0	0	0		ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	496.302396	990.590239	-0.88325	-0.00043836	4.3531	0.0021605	3.4698	0.0017221	496.30440613132237	84.276	1.8761	84.712	83.622	85.498	0.43538	0.2758	0.00090206	NaN	25.45	74	45	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	154470			2996	10510	1996	1999							0.09456726696282658
AVFLKGFPL	9	Unmodified	_AVFLKGFPL_					0	0	0		ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	ENST00000366582.7_1_1:236736097-236737533:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	496.302396	990.590239	-0.32731	-0.00016245	3.6638	0.0018183	3.3365	0.0016559	496.3041461210243	83.908	2.9758	84.363	83.559	86.535	0.45556	-0.072587	0.00021784	NaN	25.45	115	72	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	180150			2997	10510	1996	1999							0.09456726696282658
AVFPVRLH	8	Unmodified	_AVFPVRLH_					0	0	0			REV__ENSG00000156395|ENST00000369701|SORCS3	REV__ENSG00000156395|ENST00000369701|SORCS3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	469.7831726074219	2	469.782162	937.549771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.065	1	18.99	18.49	19.49	-0.074974								0	0	0	0.30553	1	382	382		16.705	2.0409	1		+		2998	20483	1997	2000	3475	3475					0.07849805096520868
AVFSLIRWK	9	Unmodified	_AVFSLIRWK_					0	0	0		nc|ENSG00000172005|P21145-4|MAL;nc|ENSG00000172005|P21145-3|MAL;nc|ENSG00000172005|P21145-2|MAL;ENSG00000172005|ENST00000309988|MAL	nc|ENSG00000172005|P21145-4|MAL	nc|ENSG00000172005|P21145-4|MAL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3378295898438	2	560.337301	1118.66005	1.3844	0.00077575	3.8445	0.0021542	5.2289	0.00293	560.3393459744692	117.94	0.74445	117.97	117.54	118.29	0.026466					39	25	2	0	0	0	0.78536	1	12962	12962		29.15	6.1071	1	42658			2999	6733	1998	2001	3476	3476					0.10546605364902462
AVFTDLEI	8	Unmodified	_AVFTDLEI_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000285188|Q08493-2|PDE4C;nc|ENSG00000285188|Q08493|PDE4C;nc|ENSG00000065989|P27815-5|PDE4A;ENST00000590407.1_1_19:10569976-10577573:+|nuORF;nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;chr19:10417865-10446218|46|10.09|0.27|5.21|+|ENST00000592685|PDE4A,PDE4A;ENSG00000065989|ENST00000380702|PDE4A;nc|ENSG00000184588|Q07343-4|PDE4B;nc|ENSG00000184588|Q07343-2|PDE4B;nc|ENSG00000184588|Q07343-3|PDE4B;ENSG00000184588|ENST00000341517|PDE4B	nc|ENSG00000113448|Q08499-5|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000184588|Q07343-4|PDE4B	ENSG00000105650|ENST00000262805|PDE4C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	454.24188232421875	2	454.242201	906.469849	-1.2476	-0.00056673	1.4252	0.00064741	0.1776	8.0674E-05	454.24278433345404	83.268	0.765	83.268	82.933	83.698	0					27	19	2	0	0	0	0.60155	1	7809	7809		71.378	2.8932	1	150500			3000	2233;449;7626	1999	2002	3477	3477					0.012872739119870857
AVFTDLEI	8	Unmodified	_AVFTDLEI_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000285188|Q08493-2|PDE4C;nc|ENSG00000285188|Q08493|PDE4C;nc|ENSG00000065989|P27815-5|PDE4A;ENST00000590407.1_1_19:10569976-10577573:+|nuORF;nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;chr19:10417865-10446218|46|10.09|0.27|5.21|+|ENST00000592685|PDE4A,PDE4A;ENSG00000065989|ENST00000380702|PDE4A;nc|ENSG00000184588|Q07343-4|PDE4B;nc|ENSG00000184588|Q07343-2|PDE4B;nc|ENSG00000184588|Q07343-3|PDE4B;ENSG00000184588|ENST00000341517|PDE4B	nc|ENSG00000113448|Q08499-5|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000184588|Q07343-4|PDE4B	ENSG00000105650|ENST00000262805|PDE4C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.2423095703125	2	454.242201	906.469849	-0.13611	-6.1827E-05	0.36885	0.00016755	0.23274	0.00010572	454.2422343635793	83.137	1.2007	83.204	82.829	84.03	0.066727					41	27	2	0	0	0	0.93529	1	8276	8276		52.299	7.7681	1	327010			3001	2233;449;7626	1999	2002	3478	3478					0.012872739119870857
AVFTDLEI	8	Unmodified	_AVFTDLEI_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000285188|Q08493-2|PDE4C;nc|ENSG00000285188|Q08493|PDE4C;nc|ENSG00000065989|P27815-5|PDE4A;ENST00000590407.1_1_19:10569976-10577573:+|nuORF;nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;chr19:10417865-10446218|46|10.09|0.27|5.21|+|ENST00000592685|PDE4A,PDE4A;ENSG00000065989|ENST00000380702|PDE4A;nc|ENSG00000184588|Q07343-4|PDE4B;nc|ENSG00000184588|Q07343-2|PDE4B;nc|ENSG00000184588|Q07343-3|PDE4B;ENSG00000184588|ENST00000341517|PDE4B	nc|ENSG00000113448|Q08499-5|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000184588|Q07343-4|PDE4B	ENSG00000105650|ENST00000262805|PDE4C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.2418518066406	2	454.242201	906.469849	0.58822	0.00026719	-0.30957	-0.00014062	0.27864	0.00012657	454.24194486416434	83.253	0.79051	83.187	82.887	83.677	-0.066185					31	18	2	0	0	0	0.12901	3	8485	8462;8473;8485		114.59	22.395	1	353910			3002	2233;449;7626	1999	2002	3479;3480;3481	3481					0.012872739119870857
AVFTDLEI	8	Unmodified	_AVFTDLEI_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000285188|Q08493-2|PDE4C;nc|ENSG00000285188|Q08493|PDE4C;nc|ENSG00000065989|P27815-5|PDE4A;ENST00000590407.1_1_19:10569976-10577573:+|nuORF;nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;chr19:10417865-10446218|46|10.09|0.27|5.21|+|ENST00000592685|PDE4A,PDE4A;ENSG00000065989|ENST00000380702|PDE4A;nc|ENSG00000184588|Q07343-4|PDE4B;nc|ENSG00000184588|Q07343-2|PDE4B;nc|ENSG00000184588|Q07343-3|PDE4B;ENSG00000184588|ENST00000341517|PDE4B	nc|ENSG00000113448|Q08499-5|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000184588|Q07343-4|PDE4B	ENSG00000105650|ENST00000262805|PDE4C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.2421875	2	454.242201	906.469849	0.66034	0.00029996	-0.77657	-0.00035275	-0.11623	-5.2796E-05	454.2418835385992	83.038	0.85704	83.097	82.816	83.673	0.059158					36	19	3	0	0	0	0.35733	3	8330	8330;8341;8355		83.287	3.348	1	299190			3003	2233;449;7626	1999	2002	3482;3483;3484	3482					0.012872739119870857
AVFTDLEI	8	Unmodified	_AVFTDLEI_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000285188|Q08493-2|PDE4C;nc|ENSG00000285188|Q08493|PDE4C;nc|ENSG00000065989|P27815-5|PDE4A;ENST00000590407.1_1_19:10569976-10577573:+|nuORF;nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;chr19:10417865-10446218|46|10.09|0.27|5.21|+|ENST00000592685|PDE4A,PDE4A;ENSG00000065989|ENST00000380702|PDE4A;nc|ENSG00000184588|Q07343-4|PDE4B;nc|ENSG00000184588|Q07343-2|PDE4B;nc|ENSG00000184588|Q07343-3|PDE4B;ENSG00000184588|ENST00000341517|PDE4B	nc|ENSG00000113448|Q08499-5|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000184588|Q07343-4|PDE4B	ENSG00000105650|ENST00000262805|PDE4C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	454.2425537109375	2	454.242201	906.469849	-1.2081	-0.00054875	1.3597	0.00061761	0.1516	6.8863E-05	454.24273056729567	82.949	0.99055	83.104	82.71	83.7	0.15474					33	22	2	0	0	0	0.60155	2	8012	8001;8012		71.378	8.3995	1	256350			3004	2233;449;7626	1999	2002	3485;3486	3486					0.012872739119870857
AVFTDLEI	8	Unmodified	_AVFTDLEI_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000285188|Q08493-2|PDE4C;nc|ENSG00000285188|Q08493|PDE4C;nc|ENSG00000065989|P27815-5|PDE4A;ENST00000590407.1_1_19:10569976-10577573:+|nuORF;nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;chr19:10417865-10446218|46|10.09|0.27|5.21|+|ENST00000592685|PDE4A,PDE4A;ENSG00000065989|ENST00000380702|PDE4A;nc|ENSG00000184588|Q07343-4|PDE4B;nc|ENSG00000184588|Q07343-2|PDE4B;nc|ENSG00000184588|Q07343-3|PDE4B;ENSG00000184588|ENST00000341517|PDE4B	nc|ENSG00000113448|Q08499-5|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000184588|Q07343-4|PDE4B	ENSG00000105650|ENST00000262805|PDE4C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	454.24310302734375	2	454.242201	906.469849	0.59788	0.00027158	-0.75801	-0.00034432	-0.16013	-7.2738E-05	454.24185023807564	83.009	0.7692	83.156	82.756	83.525	0.14694					34	17	3	0	0	0	0.84634	2	8018	8018;8040		60.294	10.269	1	231200			3005	2233;449;7626	1999	2002	3487;3488	3487					0.012872739119870857
AVFTDLEI	8	Unmodified	_AVFTDLEI_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000285188|Q08493-2|PDE4C;nc|ENSG00000285188|Q08493|PDE4C;nc|ENSG00000065989|P27815-5|PDE4A;ENST00000590407.1_1_19:10569976-10577573:+|nuORF;nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;chr19:10417865-10446218|46|10.09|0.27|5.21|+|ENST00000592685|PDE4A,PDE4A;ENSG00000065989|ENST00000380702|PDE4A;nc|ENSG00000184588|Q07343-4|PDE4B;nc|ENSG00000184588|Q07343-2|PDE4B;nc|ENSG00000184588|Q07343-3|PDE4B;ENSG00000184588|ENST00000341517|PDE4B	nc|ENSG00000113448|Q08499-5|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000184588|Q07343-4|PDE4B	ENSG00000105650|ENST00000262805|PDE4C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	454.241455078125	2	454.242201	906.469849	-1.5907	-0.00072257	1.8874	0.00085735	0.29673	0.00013479	454.2428961536622	82.982	1.1143	83.108	82.747	83.862	0.12601					33	25	2	0	0	0	0.84634	1	7986	7986		60.294	10.269	1	218330			3006	2233;449;7626	1999	2002	3489	3489					0.012872739119870857
AVFTDLEI	8	Unmodified	_AVFTDLEI_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000285188|Q08493-2|PDE4C;nc|ENSG00000285188|Q08493|PDE4C;nc|ENSG00000065989|P27815-5|PDE4A;ENST00000590407.1_1_19:10569976-10577573:+|nuORF;nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;chr19:10417865-10446218|46|10.09|0.27|5.21|+|ENST00000592685|PDE4A,PDE4A;ENSG00000065989|ENST00000380702|PDE4A;nc|ENSG00000184588|Q07343-4|PDE4B;nc|ENSG00000184588|Q07343-2|PDE4B;nc|ENSG00000184588|Q07343-3|PDE4B;ENSG00000184588|ENST00000341517|PDE4B	nc|ENSG00000113448|Q08499-5|PDE4D;ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000184588|Q07343-4|PDE4B	ENSG00000105650|ENST00000262805|PDE4C	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	454.242201	906.469849	0.069826	3.1718E-05	0.0088539	4.0218E-06	0.07868	3.574E-05	454.2421806199528	82.688	0.78257	83.162	82.836	83.619	0.47383	0.0013456	-0.00028826	NaN	114.59	39	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	514180			3007	2233;449;7626	1999	2002							0.012872739119870857
AVGFAMET	8	Unmodified	_AVGFAMET_					0	0	0			REV__ENSG00000185950|ENST00000375856|IRS2	REV__ENSG00000185950|ENST00000375856|IRS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1814880371094	2	413.194196	824.37384	2.2643	0.00093562	4.3638	0.0018031	6.6281	0.0027387	413.1961931431876	98.419	0.90049	98.78	98.155	99.056	0.36136					26	21	2	0	0	0	0.4196	1	11786	11786		23.037	2.5549	1	87807	+		3008	22811	2000	2003	3490	3490					-0.0453719719973833
AVGFRPGL	8	Unmodified	_AVGFRPGL_					0	0	0			REV__ENST00000392144.5_1_19:38145708-38146127:-|nuORF	REV__ENST00000392144.5_1_19:38145708-38146127:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.73974609375	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.82464	1	2014	2014		21.702	0	1	1364200	+		3009	26015	2001	2004	3491	3491					0.05025854279756459
AVGGALVVK	9	Unmodified	_AVGGALVVK_					0	0	0			REV__ENSG00000149781|ENST00000345728|FERMT3	REV__ENSG00000149781|ENST00000345728|FERMT3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.74884033203125	2	407.263271	812.511988	-0.1146	-4.6671E-05	3.967	0.0016156	3.8524	0.001569	407.264800655995	36.283	1.5728	36.264	35.692	37.265	-0.018673					54	34	2	0	0	0	0.20789	1	2357	2357		16.473	5.6076	1	126190	+		3010	20193	2002	2005	3492	3492					0.09823294111038194
AVGGAVLVSP	10	Unmodified	_AVGGAVLVSP_					0	0	0		nc|ENSG00000111554|Q8TC05-4|MDM1;nc|ENSG00000111554|Q8TC05|MDM1;ENSG00000111554|ENST00000682720|MDM1	nc|ENSG00000111554|Q8TC05-4|MDM1	nc|ENSG00000111554|Q8TC05-4|MDM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7805480957031	2	435.258185	868.501818	1.7591	0.00076564	-0.42492	-0.00018495	1.3341	0.00058069	435.25788708745137	35.901	0.67997	36.342	36.149	36.829	0.44043					29	16	2	0	0	0	0.37624	1	2780	2780		55.504	2.1528	1	180200			3011	2584	2003	2006	3493	3493					0.06230686385811168
AVGGFATPPH	10	Unmodified	_AVGGFATPPH_					0	0	0		ENST00000394804.6_1_4:103747817-103748756:-|nuORF;ENST00000343106.9_1_4:103747817-103748066:-|nuORF;ENST00000321805.11_1_4:103747817-103748687:-|nuORF;ENST00000508249.1_2_4:103747817-103749216:-|nuORF	ENST00000394804.6_1_4:103747817-103748756:-|nuORF	ENST00000394804.6_1_4:103747817-103748756:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.244873046875	2	477.245609	952.476666	0.42784	0.00020419	1.5249	0.00072774	1.9527	0.00093193	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.86452	1	7126	7126		30.504	0	1	2278400			3012	10042	2004	2007	3494	3494					-0.0014736841677631674
AVGGFATPPH	10	Unmodified	_AVGGFATPPH_					0	0	0		ENST00000394804.6_1_4:103747817-103748756:-|nuORF;ENST00000343106.9_1_4:103747817-103748066:-|nuORF;ENST00000321805.11_1_4:103747817-103748687:-|nuORF;ENST00000508249.1_2_4:103747817-103749216:-|nuORF	ENST00000394804.6_1_4:103747817-103748756:-|nuORF	ENST00000394804.6_1_4:103747817-103748756:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2468566894531	2	477.245609	952.476666	-0.88369	-0.00042174	2.6697	0.0012741	1.786	0.00085235	477.24693641483543	64.828	2.6891	65.382	64.729	67.418	0.55386					152	75	5	0	0	0	0.60083	1	6998	6998		50.025	4.0726	1	2295100			3013	10042	2004	2007	3495	3495					-0.0014736841677631674
AVGGIRVPE	9	Unmodified	_AVGGIRVPE_					0	0	0		ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.261474609375	2	449.261259	896.507966	0.49762	0.00022356	-1.9183	-0.00086184	-1.4207	-0.00063828	449.260034439117	72.458	0.67605	72.588	72.308	72.984	0.13063					46	23	3	0	0	0	0.78536	1	6643	6643		29.15	2.3535	1	180930			3014	10801	2005	2008	3496	3496					0.05557204617332445
AVGGRVRP	8	Unmodified	_AVGGRVRP_					0	0	0		ENST00000442670.5_1_3:23848580-23848652:+|nuORF	ENST00000442670.5_1_3:23848580-23848652:+|nuORF	ENST00000442670.5_1_3:23848580-23848652:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.248046875	2	406.248486	810.48242	0.62319	0.00025317	-0.33604	-0.00013652	0.28715	0.00011666	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.80706	1	8955	8955		19.36	0	1	38001000			3015	11795	2006	2009	3497	3497					0.06959774885558545
AVGLVLPAK	9	Unmodified	_AVGLVLPAK_					0	0	0		nc|ENSG00000162496|O75911-2|DHRS3;ENSG00000162496|ENST00000616661|DHRS3	nc|ENSG00000162496|O75911-2|DHRS3	nc|ENSG00000162496|O75911-2|DHRS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.28692626953125	2	434.286746	866.558939	-0.30416	-0.00013209	0.27728	0.00012042	-0.026885	-1.1676E-05	434.2867942921172	49.406	0.90239	49.866	49.499	50.401	0.45983					46	21	3	0	0	0	0.19953	1	4818	4818		73.975	18.471	1	1426500			3016	5694	2007	2010	3498	3498					0.12032153662175915
AVGLVLPAK	9	Unmodified	_AVGLVLPAK_					0	0	0		nc|ENSG00000162496|O75911-2|DHRS3;ENSG00000162496|ENST00000616661|DHRS3	nc|ENSG00000162496|O75911-2|DHRS3	nc|ENSG00000162496|O75911-2|DHRS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.28643798828125	2	434.286746	866.558939	0.79915	0.00034706	-0.75584	-0.00032825	0.043304	1.8806E-05	434.28631634541284	49.231	0.85115	50.135	49.725	50.576	0.90424					42	20	3	0	0	0	0.18566	2	4815	4797;4815		76.847	19.035	1	1649200			3017	5694	2007	2010	3499;3500	3500					0.12032153662175915
AVGRFVKV	8	Unmodified	_AVGRFVKV_					0	0	0		nc|ENSG00000119326|Q9UBT7-3|CTNNAL1;nc|ENSG00000119326|Q9UBT7-2|CTNNAL1;ENSG00000119326|ENST00000325551|CTNNAL1	nc|ENSG00000119326|Q9UBT7-3|CTNNAL1	nc|ENSG00000119326|Q9UBT7-3|CTNNAL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26318359375	2	438.276712	874.538872	-1.2508	-0.00054821	-1.9954	-0.00087452	-3.2462	-0.0014227	438.27752635540406	41.633	0.12278	41.592	41.489	41.612	-0.04081					4	2	2	0	0	0	0.4196	1	3146	3146		31.955	17.291	1	48133			3018	3061	2008	2011	3501	3501					0.09658402722220671
AVGRFVPA	8	Unmodified	_AVGRFVPA_					0	0	0			REV__ENST00000308018.8_1_19:39423336-39423570:+|nuORF	REV__ENST00000308018.8_1_19:39423336-39423570:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.7394104003906	2	408.739963	815.465373	-1.9297	-0.00078873	1.2966	0.00052999	-0.63302	-0.00025874	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.86791	1	2075	2075		28.254	6.5519	1	521170	+		3019	24857	2009	2012	3502	3502					0.0502585427974509
AVGRGPPKPLW	11	Unmodified	_AVGRGPPKPLW_					0	0	0			REV__ENST00000526524.5_1_8:145579333-145580709:-|nuORF	REV__ENST00000526524.5_1_8:145579333-145580709:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3421630859375	2	589.345658	1176.67676	-1.324	-0.00078029	-3.6035	-0.0021237	-4.9275	-0.002904	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.6921	1	9352	9352		32.812	4.7309	1	5946500	+		3020	22517	2010	2013	3503	3503					0.09549106250847217
AVGRWGPP	8	Unmodified	_AVGRWGPP_					0	0	0			REV__ENST00000592882.1_1_19:13264640-13264931:-|nuORF	REV__ENST00000592882.1_1_19:13264640-13264931:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.227294921875	2	420.229762	838.444972	-1.5729	-0.000661	-2.974	-0.0012498	-4.5469	-0.0019108	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.9159	1	7472	7472		44.531	3.7529	1	634680	+		3021	29220	2011	2014	3504	3504					0.01928683619939875
AVGVERRAS	9	Unmodified	_AVGVERRAS_					0	0	0		ENST00000571245.5_1_17:3831457-3831952:-|nuORF	ENST00000571245.5_1_17:3831457-3831952:-|nuORF	ENST00000571245.5_1_17:3831457-3831952:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7672424316406	2	472.76724	943.519927	0.62555	0.00029574	-0.6042	-0.00028565	0.02135	1.0094E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.78983	1	8226	8226		27.882	0	1	508030			3022	13998	2012	2015	3505	3505					0.045908213605116543
AVGVGPASRGG	11	Unmodified	_AVGVGPASRGG_					0	0	0		ENST00000356892.3_1_X:128927809-128927905:+|nuORF	ENST00000356892.3_1_X:128927809-128927905:+|nuORF	ENST00000356892.3_1_X:128927809-128927905:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.25408935546875	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.64498	1	8584	8584		39.253	1.4413	1	1578600			3023	10373	2013	2016	3506	3506					0.027191324691898444
AVGVIDILP	9	Unmodified	_AVGVIDILP_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.77734375	2	448.776211	895.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.475	1	67.527	67.027	68.027	0.052368								0	0	0	0.29299	1	6013	6013		33.516	5.6333	1				3024	2358	2014	2017	3507	3507					0.08592143562668753
AVGVYSAKN	9	Unmodified	_AVGVYSAKN_					0	0	0		ENST00000485748.5_1_1:1420203-1425183:+|nuORF;nc|ENSG00000160072|Q5T9A4-3|ATAD3B;ENST00000472194.6_1_1:1413873-1431194:+|nuORF;ENSG00000160072|ENST00000673477|ATAD3B;ENST00000474481.1_1_1:1420233-1421362:+|nuORF;ENSG00000215915|ENST00000378785|ATAD3C;nc|ENSG00000197785|Q9NVI7-3|ATAD3A;ENSG00000197785|ENST00000378756|ATAD3A;nc|ENSG00000197785|Q9NVI7|ATAD3A	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	454.74517822265625	2	454.745442	907.476331	-0.95504	-0.0004343	-0.04441	-2.0195E-05	-0.99945	-0.00045449	454.7452227087754	103.32	0.93487	103.32	103.11	104.04	0					29	22	2	0	0	0	0.77546	1	10621	10621		31.955	0.42505	1	296540			3025	5553	2015	2018	3508	3508					0.01889211863374385
AVGVYSAKN	9	Unmodified	_AVGVYSAKN_					0	0	0		ENST00000485748.5_1_1:1420203-1425183:+|nuORF;nc|ENSG00000160072|Q5T9A4-3|ATAD3B;ENST00000472194.6_1_1:1413873-1431194:+|nuORF;ENSG00000160072|ENST00000673477|ATAD3B;ENST00000474481.1_1_1:1420233-1421362:+|nuORF;ENSG00000215915|ENST00000378785|ATAD3C;nc|ENSG00000197785|Q9NVI7-3|ATAD3A;ENSG00000197785|ENST00000378756|ATAD3A;nc|ENSG00000197785|Q9NVI7|ATAD3A	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.7448425292969	2	454.745442	907.476331	2.7644	0.0012571	-3.8708	-0.0017602	-1.1064	-0.00050315	454.74355172728065	103.83	1.5253	103.79	103.16	104.69	-0.043755					91	36	4	0	0	0	0.78058	1	11411	11411		30.504	8.5438	1	836250			3026	5553	2015	2018	3509	3509					0.01889211863374385
AVGVYSAKN	9	Unmodified	_AVGVYSAKN_					0	0	0		ENST00000485748.5_1_1:1420203-1425183:+|nuORF;nc|ENSG00000160072|Q5T9A4-3|ATAD3B;ENST00000472194.6_1_1:1413873-1431194:+|nuORF;ENSG00000160072|ENST00000673477|ATAD3B;ENST00000474481.1_1_1:1420233-1421362:+|nuORF;ENSG00000215915|ENST00000378785|ATAD3C;nc|ENSG00000197785|Q9NVI7-3|ATAD3A;ENSG00000197785|ENST00000378756|ATAD3A;nc|ENSG00000197785|Q9NVI7|ATAD3A	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.74481201171875	2	454.745442	907.476331	1.0531	0.00047889	-2.1634	-0.00098381	-1.1103	-0.00050492	454.74431898752607	103.74	1.4301	103.79	103.32	104.75	0.041489					80	34	3	0	0	0	0.77546	2	11277	11252;11277		31.955	2.6214	1	827910			3027	5553	2015	2018	3510;3511	3511					0.01889211863374385
AVGVYSAKN	9	Unmodified	_AVGVYSAKN_					0	0	0		ENST00000485748.5_1_1:1420203-1425183:+|nuORF;nc|ENSG00000160072|Q5T9A4-3|ATAD3B;ENST00000472194.6_1_1:1413873-1431194:+|nuORF;ENSG00000160072|ENST00000673477|ATAD3B;ENST00000474481.1_1_1:1420233-1421362:+|nuORF;ENSG00000215915|ENST00000378785|ATAD3C;nc|ENSG00000197785|Q9NVI7-3|ATAD3A;ENSG00000197785|ENST00000378756|ATAD3A;nc|ENSG00000197785|Q9NVI7|ATAD3A	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	454.7445983886719	2	454.745442	907.476331	-1.1674	-0.00053087	-0.044215	-2.0106E-05	-1.2116	-0.00055098	454.7453088336953	103.87	1.2348	104.04	103.57	104.81	0.17095					57	30	3	0	0	0	0.76255	1	11001	11001		35.618	10.168	1	408010			3028	5553	2015	2018	3512	3512					0.01889211863374385
AVGVYSAKN	9	Unmodified	_AVGVYSAKN_					0	0	0		ENST00000485748.5_1_1:1420203-1425183:+|nuORF;nc|ENSG00000160072|Q5T9A4-3|ATAD3B;ENST00000472194.6_1_1:1413873-1431194:+|nuORF;ENSG00000160072|ENST00000673477|ATAD3B;ENST00000474481.1_1_1:1420233-1421362:+|nuORF;ENSG00000215915|ENST00000378785|ATAD3C;nc|ENSG00000197785|Q9NVI7-3|ATAD3A;ENSG00000197785|ENST00000378756|ATAD3A;nc|ENSG00000197785|Q9NVI7|ATAD3A	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	454.745442	907.476331	1.0574	0.00048087	-3.5811	-0.0016285	-2.5236	-0.0011476	454.74368159753845	103.13	0.16962	103.17	103.07	103.24	0.041481	-0.07088	-0.0028233	NaN	31.955	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34885			3029	5553	2015	2018							0.01889211863374385
AVHKLERNLK	10	Unmodified	_AVHKLERNLK_					0	0	0		ENST00000548322.1_1_14:23424385-23424601:+|nuORF	ENST00000548322.1_1_14:23424385-23424601:+|nuORF	ENST00000548322.1_1_14:23424385-23424601:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3665771484375	2	604.367121	1206.71969	3.6458	0.0022034	-4.4074	-0.0026637	-0.76167	-0.00046033	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.86763	1	12862	12862		26.693	2.1737	1	5883900			3030	13618	2016	2019	3513	3513					0.12459876308253115
AVIFLGMLEK	10	Unmodified	_AVIFLGMLEK_					0	0	0		ENST00000562946.5_1_15:42519884-42565596:-|nuORF;ENSG00000103978|ENST00000389834|TMEM87A;ENST00000569075.5_1_15:42525398-42565582:-|nuORF;nc|ENSG00000103978|Q8NBN3-3|TMEM87A;nc|ENSG00000153214|Q96K49-2|TMEM87B;ENSG00000153214|ENST00000283206|TMEM87B	ENST00000562946.5_1_15:42519884-42565596:-|nuORF	ENST00000562946.5_1_15:42519884-42565596:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8259887695312	2	560.825378	1119.6362	-0.34947	-0.00019599	1.5694	0.00088014	1.2199	0.00068415	560.8260618873793	51.029	0.61336	51.005	50.792	51.405	-0.02343					42	18	3	0	0	0	0.86272	1	4445	4445		24.519	0.31644	1	494230			3031	2107	2017	2020	3514	3514					0.08117003816232682
AVIGADSVTLK	11	Unmodified	_AVIGADSVTLK_					0	0	0		ENST00000477860.1_1_17:30200326-30200766:-|nuORF;ENSG00000108651|ENST00000261708|UTP6	ENST00000477860.1_1_17:30200326-30200766:-|nuORF	ENST00000477860.1_1_17:30200326-30200766:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.314453125	2	537.313689	1072.61282	-0.24714	-0.00013279	-0.20337	-0.00010927	-0.45051	-0.00024207	537.3133643064616	49.552	0.65517	50.012	49.623	50.278	0.45983					30	15	3	0	0	0	0.48313	1	4831	4831		53.089	11.662	1	930150			3032	2423	2018	2021	3515	3515					0.07942281303235177
AVIGADSVTLK	11	Unmodified	_AVIGADSVTLK_					0	0	0		ENST00000477860.1_1_17:30200326-30200766:-|nuORF;ENSG00000108651|ENST00000261708|UTP6	ENST00000477860.1_1_17:30200326-30200766:-|nuORF	ENST00000477860.1_1_17:30200326-30200766:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.313720703125	2	537.313689	1072.61282	0.11043	5.9335E-05	-0.45166	-0.00024268	-0.34123	-0.00018335	537.3133848538682	49.403	0.52514	50.248	49.911	50.436	0.84501					29	12	3	0	0	0	0.45992	2	4834	4821;4834		54.722	11.662	1	955030			3033	2423	2018	2021	3516;3517	3517					0.07942281303235177
AVIGILPILV	10	Unmodified	_AVIGILPILV_					0	0	0			REV__nc|ENSG00000038945|P21757-2|MSR1	REV__nc|ENSG00000038945|P21757-2|MSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	504.34783935546875	2	504.346803	1006.67905	-0.0086847	-4.3801E-06	2.6166	0.0013197	2.6079	0.0013153	504.347924900534	35.919	1.624	35.9	35.375	36.999	-0.018673					117	35	5	0	0	0	0.86786	1	2277	2277		26.796	7.4361	1	1089900	+		3034	16307	2019	2022	3518	3518					0.17598141935945932
AVIGILPILV	10	Unmodified	_AVIGILPILV_					0	0	0			REV__nc|ENSG00000038945|P21757-2|MSR1	REV__nc|ENSG00000038945|P21757-2|MSR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3477478027344	2	504.346803	1006.67905	0.25279	0.00012749	2.2254	0.0011224	2.4782	0.0012499	504.3477701271758	36.647	1.9451	36.928	36.004	37.949	0.28173					113	47	4	0	0	0	0.86786	1	2866	2866		26.796	0	1	1998100	+		3035	16307	2019	2022	3519	3519					0.17598141935945932
AVIGILPILV	10	Unmodified	_AVIGILPILV_					0	0	0			REV__nc|ENSG00000038945|P21757-2|MSR1	REV__nc|ENSG00000038945|P21757-2|MSR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3480529785156	2	504.346803	1006.67905	2.0026	0.00101	0.50234	0.00025335	2.5049	0.0012633	504.34690233028635	36.516	1.5993	36.956	36.186	37.785	0.44043					102	38	4	0	0	0	0.86786	1	2895	2895		26.796	6.3143	1	2044400	+		3036	16307	2019	2022	3520	3520					0.17598141935945932
AVIGVIPVT	9	Unmodified	_AVIGVIPVT_					0	0	0			REV__nc|ENSG00000206341|P01893|HLA-H	REV__nc|ENSG00000206341|P01893|HLA-H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7793884277344	2	434.778754	867.542954	0.023581	1.0252E-05	2.6379	0.0011469	2.6615	0.0011571	434.7797629333649	48.108	2.6391	48.098	47.574	50.213	-0.0093269					205	68	4	0	0	0	0.7932	1	3920	3920		24.203	2.5004	1	2315200	+		3037	23780	2020	2023	3521	3521					0.10388447425293634
AVIHMRSV	8	Unmodified	_AVIHMRSV_					0	0	0		ENSG00000148215|ENST00000373680|OR5C1	ENSG00000148215|ENST00000373680|OR5C1	ENSG00000148215|ENST00000373680|OR5C1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7915954589844	2	456.75783	911.501106	-1.7446	-0.00079686	-0.65393	-0.00029869	-2.3985	-0.0010955	456.7571282115105	48.37	0.82642	48.37	47.911	48.737	0					31	20	2	0	0	0	0.4196	1	3796	3796		20.482	0	1	51932			3038	4939	2021	2024	3522	3522					0.04181568465116925
AVIILKNKFGY	11	Unmodified	_AVIILKNKFGY_					0	0	0			REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.8869018554688	2	633.384448	1264.75434	-0.15105	-9.5672E-05	2.0276	0.0012843	1.8766	0.0011886	633.3858677964031	58.829	0.87076	58.815	58.288	59.159	-0.013729					44	29	2	0	0	0	0.74022	1	5380	5380		20.947	0	1	53343	+		3039	20834	2022	2025	3523	3523					0.13255699396381715
AVIILKNKFGY	11	Unmodified	_AVIILKNKFGY_					0	0	0			REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59228515625	3	422.592058	1264.75434	-0.25442	-0.00010752	1.599	0.00067572	1.3446	0.0005682	422.59266079937345	57.115	1.709	57.086	56.583	58.292	-0.02866					127	51	4	0	0	0	0.73621	1	5322	5322		25.126	3.4402	1	391180	+		3040	20834	2022	2025	3524	3524					0.13255699396381715
AVIILKNKFGY	11	Unmodified	_AVIILKNKFGY_					0	0	0			REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.9272155761719	3	422.592058	1264.75434	1.1457	0.00048418	-0.030848	-1.3036E-05	1.1149	0.00047114	422.5919438969776	60.061	0.9755	60.094	59.647	60.623	0.032822					42	25	2	0	0	0	0.76251	1	5640	5640		19.263	2.0959	1	98194	+		3041	20834	2022	2025	3525	3525					0.13255699396381715
AVIILKNKFGY	11	Unmodified	_AVIILKNKFGY_					0	0	0			REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.59375	3	422.592058	1264.75434	-0.6351	-0.00026839	1.8458	0.00078002	1.2107	0.00051163	422.59269266623227	53.26	1.1275	53.198	52.52	53.647	-0.062061					70	30	3	0	0	0	0.73621	1	4334	4334		25.126	4.0938	1	161760	+		3042	20834	2022	2025	3526	3526					0.13255699396381715
AVIILKNKFGY	11	Unmodified	_AVIILKNKFGY_					0	0	0			REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	422.592058	1264.75434	-1.5924	-0.00067294	2.5911	0.001095	0.99872	0.00042205	422.92736970827565	59.87	0.11205	59.87	59.806	59.918	0	-0.16743	0.0020173	NaN	19.263	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36764	+		3043	20834	2022	2025							0.13255699396381715
AVIILKNKFGY	11	Unmodified	_AVIILKNKFGY_					0	0	0			REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	422.592058	1264.75434	1.1457	0.00048418	-0.030848	-1.3036E-05	1.1149	0.00047114	422.5919438969776	60.061	0.9755	60.094	59.647	60.623	0.032822	0.056289	-0.0013068	NaN	19.263	42	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98194	+		3044	20834	2022	2025							0.13255699396381715
AVIILKNKFGY	11	Unmodified	_AVIILKNKFGY_					0	0	0			REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	422.592058	1264.75434	-1.8031	-0.00076199	3.8516	0.0016277	2.0485	0.00086568	422.59346514933276	59.898	0.55216	59.992	59.76	60.312	0.094059	-0.046075	0.0036153	NaN	19.263	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101930	+		3045	20834	2022	2025							0.13255699396381715
AVIILKNKFGY	11	Unmodified	_AVIILKNKFGY_					0	0	0			REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	422.592058	1264.75434	0.36812	0.00015556	1.5323	0.00064754	1.9004	0.0008031	422.59246727389103	60.078	0.44569	60.195	60.055	60.501	0.11676	0.15722	0.0006749	NaN	19.263	28	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105380	+		3046	20834	2022	2025							0.13255699396381715
AVIILVPVR	9	Unmodified	_AVIILVPVR_					0	0	0		ENSG00000125703|ENST00000317868|ATG4C	ENSG00000125703|ENST00000317868|ATG4C	ENSG00000125703|ENST00000317868|ATG4C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	490.3338623046875	2	490.33677	978.658987	-0.70583	-0.00034609	-0.92387	-0.00045301	-1.6297	-0.0007991	490.3361563467807	65.561	0.40634	65.691	65.507	65.913	0.12995					36	20	2	0	0	0	0.7932	1	5814	5814		12.959	0.75233	1	1004700			3047	3408	2023	2026	3527	3527					0.16880390995993366
AVIKIRFFK	9	Unmodified	_AVIKIRFFK_					0	0	0		ENSG00000101850|ENST00000467482|GPR143	ENSG00000101850|ENST00000467482|GPR143	ENSG00000101850|ENST00000467482|GPR143	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.3624267578125	2	561.363319	1120.71209	-1.2272	-0.00068889	2.0811	0.0011683	0.85392	0.00047936	561.3643862619919	45.972	0.98896	45.972	45.502	46.491	0					58	25	3	0	0	0	0.7932	1	3438	3438		25.45	6.0902	1	208060			3048	1965	2024	2027	3528	3528					0.1565576877865169
AVIKIRFFKI	10	Unmodified	_AVIKIRFFKI_					0	0	0		ENSG00000101850|ENST00000467482|GPR143	ENSG00000101850|ENST00000467482|GPR143	ENSG00000101850|ENST00000467482|GPR143	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7666015625	3	412.27266	1233.79615	-1.2298	-0.00050703	1.7432	0.00071868	0.51337	0.00021165	412.273252644864	44.235	1.4245	45.08	44.612	46.037	0.84438					83	34	3	0	0	0	0.37624	1	4028	4028		11.636	5.6349	1	1661900			3049	1965	2025	2028	3529	3529					0.18860299875564124
AVILDLEGA	9	Unmodified	_AVILDLEGA_					0	0	0		ENST00000553607.1_1_16:30102588-30102927:-|nuORF	ENST00000553607.1_1_16:30102588-30102927:-|nuORF	ENST00000553607.1_1_16:30102588-30102927:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7546081542969	2	450.755475	899.496398	-1.264	-0.00056978	-1.5875	-0.00071559	-2.8516	-0.0012854	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.69914	1	7772	7772		40.573	4.9543	1	414240			3050	13701	2026	2029	3530	3530					0.042629628033296285
AVILDVVPAM	10	Unmodified	_AVILDVVPAM_					0	0	0			REV__ENST00000438412.5_1_6:30262390-30262420:-|nuORF	REV__ENST00000438412.5_1_6:30262390-30262420:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	514.2978515625	2	514.296453	1026.57835	0.77641	0.0003993	1.9944	0.0010257	2.7708	0.001425	514.2978580513103	96.313	2.149	96.476	95.152	97.301	0.16316					118	50	3	0	0	0	0.86452	1	9927	9927		30.504	7.4612	1	671130	+		3051	26721	2027	2030	3531	3531					0.06612741890762663
AVILKDSKVF	10	Unmodified	_AVILKDSKVF_					0	0	0		nc|ENSG00000105928|O60443-3|GSDME;ENSG00000105928|ENST00000645220|GSDME;nc|ENSG00000105928|O60443-2|GSDME	nc|ENSG00000105928|O60443-3|GSDME	nc|ENSG00000105928|O60443-3|GSDME	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3394775390625	2	560.342249	1118.66995	-0.40673	-0.00022791	-3.2012	-0.0017938	-3.608	-0.0020217	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.82886	3	10851	10682;10851;10876		37.812	9.5699	1	60162000			3052	2264	2028	2031	3532;3533;3534	3533					0.11535748579603933
AVILKDSKVF	10	Unmodified	_AVILKDSKVF_					0	0	0		nc|ENSG00000105928|O60443-3|GSDME;ENSG00000105928|ENST00000645220|GSDME;nc|ENSG00000105928|O60443-2|GSDME	nc|ENSG00000105928|O60443-3|GSDME	nc|ENSG00000105928|O60443-3|GSDME	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.34033203125	2	560.342249	1118.66995	-0.39995	-0.00022411	-2.8037	-0.001571	-3.2037	-0.0017952	560.3405930635428	105.99	1.5593	105.99	105.37	106.93	0					97	35	4	0	0	0	0.86348	2	10888	10888;11020		31.53	7.3271	1	744480			3053	2264	2028	2031	3535;3536	3535					0.11535748579603933
AVILKDSKVF	10	Unmodified	_AVILKDSKVF_					0	0	0		nc|ENSG00000105928|O60443-3|GSDME;ENSG00000105928|ENST00000645220|GSDME;nc|ENSG00000105928|O60443-2|GSDME	nc|ENSG00000105928|O60443-3|GSDME	nc|ENSG00000105928|O60443-3|GSDME	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3400268554688	2	560.342249	1118.66995	-1.4184	-0.0007948	-1.6522	-0.00092581	-3.0706	-0.0017206	560.3412485593329	105.6	1.2349	105.67	104.77	106	0.073112					105	30	5	0	0	0	0.80179	1	11220	11220		39.253	1.4413	1	1607400			3054	2264	2028	2031	3537	3537					0.11535748579603933
AVILKDSKVF	10	Unmodified	_AVILKDSKVF_					0	0	0		nc|ENSG00000105928|O60443-3|GSDME;ENSG00000105928|ENST00000645220|GSDME;nc|ENSG00000105928|O60443-2|GSDME	nc|ENSG00000105928|O60443-3|GSDME	nc|ENSG00000105928|O60443-3|GSDME	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402709960938	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.85694	2	12681	12275;12681		27.882	3.6795	1	4071000			3055	2264	2028	2031	3538;3539	3539					0.11535748579603933
AVILKEFKGT	10	Unmodified	_AVILKEFKGT_					0	0	0			REV__ENST00000513428.5_1_4:122602814-122617744:-|nuORF	REV__ENST00000513428.5_1_4:122602814-122617744:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.33203125	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.86348	1	9691	9691		31.53	1.0262	1	2365500	+		3056	21034	2029	2032	3540	3540					0.10615462062582992
AVILKPQV	8	Unmodified	_AVILKPQV_					0	0	0		ENST00000357430.7_1_2:223806358-223806715:+|nuORF	ENST00000357430.7_1_2:223806358-223806715:+|nuORF	ENST00000357430.7_1_2:223806358-223806715:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7775573730469	2	434.286746	866.558939	-0.82268	-0.00035728	3.8304	0.0016635	3.0077	0.0013062	434.2883847183106	35.903	1.6622	35.847	35.385	37.047	-0.055904					75	36	4	0	0	0	0.4196	1	2356	2356		24.203	0	1	293280			3057	10387	2030	2033	3541	3541					0.12032153662175915
AVILKRREEPV	11	Unmodified	_AVILKRREEPV_					0	0	0			REV__nc|ENSG00000113649|O14776-2|TCERG1	REV__nc|ENSG00000113649|O14776-2|TCERG1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26776123046875	3	437.269866	1308.78777	-1.6775	-0.00073351	-2.9878	-0.0013065	-4.6653	-0.00204	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.77511	1	4492	4492		16.53	1.1967	1	2305800	+		3058	18006	2031	2034	3542	3542					0.1457270116827658
AVILPKDL	8	Unmodified	_AVILPKDL_					0	0	0		ENSG00000005189|ENST00000261377|REXO5;nc|ENSG00000005189|Q96IC2-2|REXO5	ENSG00000005189|ENST00000261377|REXO5	ENSG00000005189|ENST00000261377|REXO5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.252685546875	2	434.778754	867.542954	-1.6064	-0.00069843	4.4384	0.0019297	2.832	0.0012313	434.78082519883714	81.791	2.6305	81.905	80.444	83.075	0.11426					99	63	2	0	0	0	0.4196	1	7874	7874		30.504	0	1	78357			3059	676	2032	2035	3543	3543					0.10388447425270897
AVIPGLWAR	9	Unmodified	_AVIPGLWAR_					0	0	0		nc|ENSG00000153487|Q9UK53|ING1	nc|ENSG00000153487|Q9UK53|ING1	nc|ENSG00000153487|Q9UK53|ING1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.795654296875	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.7932	1	3518	3518		24.203	2.2429	1	3201400			3060	15000	2033	2036	3544	3544					0.08446074267988024
AVIPLGVTV	9	Unmodified	_AVIPLGVTV_					0	0	0		nc|ENSG00000178950|O14976-2|GAK;ENSG00000178950|ENST00000314167|GAK	nc|ENSG00000178950|O14976-2|GAK	nc|ENSG00000178950|O14976-2|GAK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77972412109375	2	434.778754	867.542954	-1.3516	-0.00058764	3.9223	0.0017053	2.5707	0.0011177	434.78034506978366	39.667	1.8641	39.623	39.121	40.985	-0.043697					176	46	5	0	0	0	0.7932	1	3037	3037		20.482	1.1219	1	3943300			3061	7233	2034	2037	3545	3545					0.10388447425282266
AVIPLGVTV	9	Unmodified	_AVIPLGVTV_					0	0	0		nc|ENSG00000178950|O14976-2|GAK;ENSG00000178950|ENST00000314167|GAK	nc|ENSG00000178950|O14976-2|GAK	nc|ENSG00000178950|O14976-2|GAK	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7789611816406	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.597	1	61.705	61.205	62.205	0.10743								0	0	0	0.31088	1	5352	5352		26.796	1.3459	1				3062	7233	2034	2037	3546	3546					0.10388447425282266
AVIPLKKM	8	Unmodified	_AVIPLKKM_					0	0	0			REV__nc|ENSG00000124422|Q9UPT9-2|USP22;REV__ENSG00000247746|ENST00000500968|USP51	REV__ENSG00000247746|ENST00000500968|USP51	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.75311279296875	2	450.290974	898.567395	0.5626	0.00025334	1.7722	0.00079802	2.3348	0.0010514	450.29115505658814	79.608	0.14023	79.747	79.673	79.814	0.13974					8	5	2	0	0	0	0.4196	1	7553	7553		28.254	1.4582	1	27782	+		3063	23858;15649	2035	2038	3547	3547					0.11405384307147415
AVIPLSPK	8	Unmodified	_AVIPLSPK_					0	0	0		ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2671203613281	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.87922	1	2479	2479		31.955	1.4512	1	1649400			3064	8069	2036	2039	3548	3548					0.0979217825380374
AVIPWLGAR	9	Unmodified	_AVIPWLGAR_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7966003417969	2	491.795269	981.575986	-1.6329	-0.00080306	1.561	0.00076767	-0.071965	-3.5392E-05	491.7959208879528	43.173	1.2305	43.173	42.794	44.024	0					52	29	2	0	0	0	0.7932	1	3034	3034		24.203	0	1	189890	+		3065	21204	2037	2040	3549	3549					0.08446074267988024
AVIPWLGAR	9	Unmodified	_AVIPWLGAR_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79559326171875	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.77546	2	3847	3847;4077		31.955	6.5047	1	1240000	+		3066	21204	2037	2040	3550;3551	3550					0.08446074267988024
AVIPWLGAR	9	Unmodified	_AVIPWLGAR_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7962951660156	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.721	1	56.709	56.209	57.209	-0.012203								0	0	0	0.32159	1	5094	5094		23.042	0	1		+		3067	21204	2037	2040	3552	3552					0.08446074267988024
AVIPWLGAR	9	Unmodified	_AVIPWLGAR_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7945556640625	2	491.795269	981.575986	-0.99617	-0.00048991	0.64691	0.00031815	-0.34926	-0.00017177	491.7955324242566	43.442	1.556	43.406	42.885	44.441	-0.035816					74	36	3	0	0	0	0.7932	1	3408	3408		25.45	1.2474	1	171190	+		3068	21204	2037	2040	3553	3553					0.08446074267988024
AVIPWLGAR	9	Unmodified	_AVIPWLGAR_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7947082519531	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.7932	1	4344	4344		26.796	1.3459	1	1111900	+		3069	21204	2037	2040	3554	3554					0.08446074267988024
AVIPWLGAR	9	Unmodified	_AVIPWLGAR_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7955627441406	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.77546	2	3465	3465;3537		31.955	6.5047	1	2747400	+		3070	21204	2037	2040	3555;3556	3555					0.08446074267988024
AVIPWLGAR	9	Unmodified	_AVIPWLGAR_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7955017089844	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.7932	1	3728	3728		17.365	0.89182	1	1219600	+		3071	21204	2037	2040	3557	3557					0.08446074267988024
AVIPWLGAR	9	Unmodified	_AVIPWLGAR_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958068847656	2	491.795269	981.575986	-0.70573	-0.00034708	1.5523	0.0007634	0.84654	0.00041632	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.77546	1	4257	4257		31.955	4.0726	1	772710	+		3072	21204	2037	2040	3558	3558					0.08446074267988024
AVIPWLGAR	9	Unmodified	_AVIPWLGAR_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79595947265625	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.7932	1	4054	4054		25.45	1.2474	1	581270	+		3073	21204	2037	2040	3559	3559					0.08446074267988024
AVIPWLGAR	9	Unmodified	_AVIPWLGAR_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7967529296875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.678	1	62.799	62.299	63.299	0.1209								0	0	0	0.30053	1	5469	5469		30.504	0	1		+		3074	21204	2037	2040	3560	3560					0.08446074267988024
AVIRAPKA	8	Unmodified	_AVIRAPKA_					0	0	0			REV__nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	REV__nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26629638671875	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.86288	1	2434	2434		26.796	6.3143	1	268720	+		3075	23457	2038	2041	3561	3561					0.10394116205179671
AVISLVMF	8	Unmodified	_AVISLVMF_					0	0	0		chr5:78459362-78467445|19|15.42|0.52|4.88|+|0|SCAMP1,None|1;ENSG00000085365|ENST00000621999|SCAMP1	chr5:78459362-78467445|19|15.42|0.52|4.88|+|0|SCAMP1,None|1	chr5:78459362-78467445|19|15.42|0.52|4.88|+|0|SCAMP1,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2554931640625	2	440.254057	878.493561	-0.82975	-0.0003653	3.597	0.0015836	2.7672	0.0012183	440.2556367977485	60.313	1.0519	60.313	60.031	61.083	0.00051117					60	36	3	0	0	0	0.82464	1	5217	5217		21.702	4.9974	1	290170			3076	458	2039	2042	3562	3562					0.04945416144835235
AVISPAKLL	9	Unmodified	_AVISPAKLL_					0	0	0			REV__ENSG00000124177|ENST00000373233|CHD6	REV__ENSG00000124177|ENST00000373233|CHD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3011779785156	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.7932	1	2071	2071		25.45	6.0902	1	1715600	+		3077	18564	2040	2043	3563	3563					0.1262842283365444
AVISVLMH	8	Unmodified	_AVISVLMH_					0	0	0		nc|ENSG00000017260|P98194-2|ATP2C1;nc|ENSG00000017260|P98194-4|ATP2C1;ENSG00000017260|ENST00000510168|ATP2C1;nc|ENSG00000017260|P98194-3|ATP2C1;nc|ENSG00000017260|P98194-5|ATP2C1;nc|ENSG00000017260|P98194-8|ATP2C1;nc|ENSG00000017260|P98194-9|ATP2C1;nc|ENSG00000017260|P98194-6|ATP2C1;nc|ENSG00000017260|P98194-7|ATP2C1	nc|ENSG00000017260|P98194-2|ATP2C1	nc|ENSG00000017260|P98194-2|ATP2C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25177001953125	2	435.249306	868.484059	1.6099	0.00070073	2.9528	0.0012852	4.5628	0.001986	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.86791	5	7638	7424;7638;7646;8240;8367		46.766	16.925	1	3370400			3078	829	2041	2044	3564;3565;3566;3567;3568	3565					0.044556478593108295
AVISVLMH	8	Unmodified	_AVISVLMH_					0	0	0		nc|ENSG00000017260|P98194-2|ATP2C1;nc|ENSG00000017260|P98194-4|ATP2C1;ENSG00000017260|ENST00000510168|ATP2C1;nc|ENSG00000017260|P98194-3|ATP2C1;nc|ENSG00000017260|P98194-5|ATP2C1;nc|ENSG00000017260|P98194-8|ATP2C1;nc|ENSG00000017260|P98194-9|ATP2C1;nc|ENSG00000017260|P98194-6|ATP2C1;nc|ENSG00000017260|P98194-7|ATP2C1	nc|ENSG00000017260|P98194-2|ATP2C1	nc|ENSG00000017260|P98194-2|ATP2C1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2516174316406	2	435.249306	868.484059	0.52341	0.00022781	4.0632	0.0017685	4.5866	0.0019963	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.86791	2	7328	7101;7328		35.201	1.4582	1	712390			3079	829	2041	2044	3569;3570	3570					0.044556478593108295
AVITPCSHFFH	11	Unmodified	_AVITPCSHFFH_					0	0	0		ENSG00000145860|ENST00000424310|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145;ENST00000519985.1_1_5:158585348-158586040:-|nuORF	ENSG00000145860|ENST00000424310|RNF145	ENSG00000145860|ENST00000424310|RNF145	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	629.8043823242188	2	629.805508	1257.59646	0.11625	7.3214E-05	-1.3349	-0.00084074	-1.2187	-0.00076753	629.8045908375641	30.944	0.75718	30.963	30.675	31.432	0.01836					59	20	4	0	0	0	0.68378	1	1653	1653		34.173	1.3601	1	716840			3080	4798	2042	2045	3571	3571					-0.022031231345181368
AVITRLLQNLI	11	Unmodified	_AVITRLLQNLI_					0	0	0		ENSG00000138075|ENST00000405322|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.60577392578125	3	418.602845	1252.78671	0.27529	0.00011524	4.3507	0.0018212	4.6259	0.0019364	418.604626684704	50.079	2.9767	50.122	47.918	50.895	0.042236					100	78	2	0	0	0	0.77205	1	3943	3943		17.167	1.2461	1	77871			3081	4264	2043	2046	3572	3572					0.17042486799391554
AVIVEKPL	8	Unmodified	_AVIVEKPL_					0	0	0		ENST00000453839.5_1_2:61014200-61024278:+|nuORF;ENST00000496283.5_1_2:61002191-61021341:+|nuORF;nc|ENSG00000115421|Q9BWT3-2|PAPOLG;ENSG00000115421|ENST00000238714|PAPOLG	ENST00000453839.5_1_2:61014200-61024278:+|nuORF	ENST00000453839.5_1_2:61014200-61024278:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77996826171875	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.9159	1	3533	3533		44.531	2.0566	1	1294000			3082	2843	2044	2047	3573	3573					0.10388447425293634
AVIVEKPL	8	Unmodified	_AVIVEKPL_					0	0	0		ENST00000453839.5_1_2:61014200-61024278:+|nuORF;ENST00000496283.5_1_2:61002191-61021341:+|nuORF;nc|ENSG00000115421|Q9BWT3-2|PAPOLG;ENSG00000115421|ENST00000238714|PAPOLG	ENST00000453839.5_1_2:61014200-61024278:+|nuORF	ENST00000453839.5_1_2:61014200-61024278:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7793884277344	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.93529	1	3454	3454		52.299	9.8247	1	2165200			3083	2843	2044	2047	3574	3574					0.10388447425293634
AVIVPVTAV	9	Unmodified	_AVIVPVTAV_					0	0	0			REV__ENSG00000001626|ENST00000003084|CFTR	REV__ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7803955078125	2	434.778754	867.542954	0.085891	3.7343E-05	2.526	0.0010983	2.6119	0.0011356	434.77973178522114	39.697	1.6335	39.706	39.141	40.774	0.0092812					137	39	4	0	0	0	0.5393	1	2766	2766		50.025	7.5501	1	4100400	+		3084	16042	2045	2048	3575	3575					0.10388447425293634
AVIVPVTAV	9	Unmodified	_AVIVPVTAV_					0	0	0			REV__ENSG00000001626|ENST00000003084|CFTR	REV__ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.780029296875	2	434.778754	867.542954	0.12026	5.2288E-05	3.2796	0.0014259	3.3998	0.0014782	434.78004408406343	33.259	0.88562	33.227	32.891	33.776	-0.032677					85	40	3	0	0	0	0.7932	1	1576	1576		25.45	1.2474	1	316820	+		3085	16042	2045	2048	3576	3576					0.10388447425293634
AVIVPVTAV	9	Unmodified	_AVIVPVTAV_					0	0	0			REV__ENSG00000001626|ENST00000003084|CFTR	REV__ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7799377441406	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.76996	1	3265	3265		33.516	5.2613	1	17256000	+		3086	16042	2045	2048	3577	3577					0.10388447425293634
AVIVPVTAV	9	Unmodified	_AVIVPVTAV_					0	0	0			REV__ENSG00000001626|ENST00000003084|CFTR	REV__ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.780029296875	2	434.778754	867.542954	-0.7455	-0.00032413	3.1434	0.0013667	2.3979	0.0010426	434.7799642778913	44.364	1.5041	44.814	44.322	45.826	0.45025					111	36	4	0	0	0	0.67235	1	4046	4046		42.474	1.9018	1	4473900	+		3087	16042	2045	2048	3578	3578					0.10388447425293634
AVIVPVTAV	9	Unmodified	_AVIVPVTAV_					0	0	0			REV__ENSG00000001626|ENST00000003084|CFTR	REV__ENSG00000001626|ENST00000003084|CFTR	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.8869	-0.00082038	4.9733	0.0021623	3.0864	0.0013419	434.78082327110417	39.514	1.9331	39.514	38.686	40.619	0	-0.13118	0.0010568	NaN	50.025	161	49	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4947400	+		3088	16042	2045	2048							0.10388447425293634
AVIVPVTAV	9	Unmodified	_AVIVPVTAV_					0	0	0			REV__ENSG00000001626|ENST00000003084|CFTR	REV__ENSG00000001626|ENST00000003084|CFTR	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.778754	867.542954	-1.6431	-0.00071436	4.7803	0.0020784	3.1373	0.001364	434.78070094435526	39.699	1.9137	39.705	38.842	40.755	0.0065002	0.060158	0.00088897	NaN	50.025	170	55	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4689000	+		3089	16042	2045	2048							0.10388447425293634
AVIYVLSTPAH	11	Unmodified	_AVIYVLSTPAH_					0	0	0		nc|ENSG00000278535|Q6UWP2-2|DHRS11;nc|ENSG00000278535|Q6UWP2-3|DHRS11;ENSG00000278535|ENST00000618403|DHRS11	nc|ENSG00000278535|Q6UWP2-2|DHRS11	nc|ENSG00000278535|Q6UWP2-2|DHRS11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.8308715820312	2	585.829506	1169.64446	-0.92321	-0.00054084	2.3767	0.0013923	1.4535	0.00085149	585.8307293050794	57.888	1.4017	57.888	57.479	58.881	0					105	56	3	0	0	0	0.72228	1	5019	5019		27.882	1.1893	1	164040			3090	9031	2046	2049	3579	3579					0.06642274057185205
AVKKRPSGG	9	Unmodified	_AVKKRPSGG_					0	0	0			REV__ENSG00000162402|ENST00000294383|USP24	REV__ENSG00000162402|ENST00000294383|USP24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.274658203125	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.7932	1	9845	9845		26.693	4.733	1	47650000	+		3091	20809	2047	2050	3580	3580					0.08152313228526964
AVKLIIGR	8	Unmodified	_AVKLIIGR_					0	0	0		ENST00000486986.6_1_1:151752280-151755498:-|nuORF;nc|ENSG00000182134|Q9Y2W6-3|TDRKH;ENSG00000182134|ENST00000368824|TDRKH	ENST00000486986.6_1_1:151752280-151755498:-|nuORF	ENST00000486986.6_1_1:151752280-151755498:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3006896972656	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.83058	1	8517	8517		12.959	0	1	6323600			3092	7423	2048	2051	3581	3581					0.14627262273359065
AVKLSHLMK	9	Unmodified	_AVKLSHLMK_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8091430664062	2	513.810062	1025.60557	0.090876	4.6693E-05	-2.2226	-0.001142	-2.1317	-0.0010953	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.7932	1	4252	4252		19.997	0.6368	1	1448700	+		3093	22575	2049	2052	3582	3582					0.09379270221802471
AVKPKAAKPKA	11	Unmodified	_AVKPKAAKPKA_					0	0	0		ENSG00000184357|ENST00000331442|H1-5	ENSG00000184357|ENST00000331442|H1-5	ENSG00000184357|ENST00000331442|H1-5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	554.866455078125	2	554.863683	1107.71281	0.13477	7.4779E-05	-1.7932	-0.00099499	-1.6585	-0.00092021	554.8627788210109	16.338	0.10009	16.397	16.338	16.438	0.059269					6	4	2	0	0	0	0.73893	1	138	138		24.519	5.4157	1	78394			3094	7602	2050	2053	3583	3583					0.16326563427696783
AVKPKAAKPKA	11	Unmodified	_AVKPKAAKPKA_					0	0	0		ENSG00000184357|ENST00000331442|H1-5	ENSG00000184357|ENST00000331442|H1-5	ENSG00000184357|ENST00000331442|H1-5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	554.863683	1107.71281	0.16429	9.1156E-05	-2.0452	-0.0011348	-1.8809	-0.0010436	554.8620231212674	16.345	0.089405	16.393	16.33	16.419	0.047804	-0.0020765	-0.000194	NaN	24.519	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62340			3095	7602	2050	2053							0.16326563427696783
AVKTALLDRKP	11	Unmodified	_AVKTALLDRKP_					0	0	0		ENSG00000184677|ENST00000375647|ZBTB40	ENSG00000184677|ENST00000375647|ZBTB40	ENSG00000184677|ENST00000375647|ZBTB40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5891418457031	3	404.587195	1210.73976	0.88744	0.00035905	4.0818	0.0016514	4.9692	0.0020105	404.58872084181826	39.368	1.6571	39.379	38.582	40.239	0.011173					116	38	4	0	0	0	0.75457	1	2761	2761		21.032	0.71722	1	391440			3096	7638	2051	2054	3584	3584					0.14281627248237783
AVLAELPAL	9	Unmodified	_AVLAELPAL_					0	0	0		ENSG00000144712|ENST00000456430|CAND2;nc|ENSG00000144712|O75155-2|CAND2	ENSG00000144712|ENST00000456430|CAND2	ENSG00000144712|ENST00000456430|CAND2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2542419433594	2	448.776211	895.537869	-1.3697	-0.00061469	3.5494	0.0015929	2.1797	0.00097822	448.776587733698	43.731	1.3267	44.181	43.686	45.012	0.45025					49	32	2	0	0	0	0.20789	1	4013	4013		40.573	8.6178	1	297260			3097	4727	2052	2055	3585	3585					0.08592143562646015
AVLAGAPLL	9	Unmodified	_AVLAGAPLL_					0	0	0			REV__ENSG00000275023|ENST00000621332|MLLT6	REV__ENSG00000275023|ENST00000621332|MLLT6	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.76678466796875	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.325	1	42.296	41.796	42.796	-0.029461								0	0	0	0.30219	1	3153	3153		29.842	0	1		+		3098	24007	2053	2056	3586	3586					0.09792178253815109
AVLDKVKTKKS	11	Unmodified	_AVLDKVKTKKS_					0	0	0		ENSG00000051382|ENST00000674063|PIK3CB	ENSG00000051382|ENST00000674063|PIK3CB	ENSG00000051382|ENST00000674063|PIK3CB	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2573547363281	3	406.258967	1215.75507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.048	1	67.101	66.601	67.601	0.052368								0	0	0	0.56276	1	5959	5959		21.78	8.8229	1				3099	1000	2054	2057	3587	3587					0.15582494045429485
AVLDQLPI	8	Unmodified	_AVLDQLPI_					0	0	0			REV__ENSG00000170892|ENST00000396388|TSEN34	REV__ENSG00000170892|ENST00000396388|TSEN34	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2575378417969	2	434.760561	867.506569	-1.1839	-0.00051471	-1.2859	-0.00055904	-2.4698	-0.0010738	434.7597390953803	87.854	3.3898	87.854	86.125	89.515	0					151	78	4	0	0	0	0.89962	1	8398	8398		38.806	0	1	789230	+		3100	21696	2055	2058	3588	3588					0.06751570528570028
AVLEILAAL	9	Unmodified	_AVLEILAAL_					0	0	0		ENST00000522311.1_1_8:103848756-103855898:-|nuORF;ENSG00000155096|ENST00000337198|AZIN1	ENST00000522311.1_1_8:103848756-103855898:-|nuORF	ENST00000522311.1_1_8:103848756-103855898:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7895812988281	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.76996	1	3653	3653		33.516	1.5607	1	608260			3101	5312	2056	2059	3589	3589					0.10984716596760791
AVLEILAAL	9	Unmodified	_AVLEILAAL_					0	0	0		ENST00000522311.1_1_8:103848756-103855898:-|nuORF;ENSG00000155096|ENST00000337198|AZIN1	ENST00000522311.1_1_8:103848756-103855898:-|nuORF	ENST00000522311.1_1_8:103848756-103855898:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79315185546875	2	456.791861	911.569169	-0.16145	-7.375E-05	3.0967	0.0014145	2.9352	0.0013408	456.79315790298426	37.204	0.82482	37.517	36.88	37.705	0.31312					71	19	4	0	0	0	0.77546	1	2965	2965		31.955	5.1588	1	4730400			3102	5312	2056	2059	3590	3590					0.10984716596760791
AVLEILAAL	9	Unmodified	_AVLEILAAL_					0	0	0		ENST00000522311.1_1_8:103848756-103855898:-|nuORF;ENSG00000155096|ENST00000337198|AZIN1	ENST00000522311.1_1_8:103848756-103855898:-|nuORF	ENST00000522311.1_1_8:103848756-103855898:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7929382324219	2	456.791861	911.569169	1.3225	0.00060413	1.789	0.00081719	3.1115	0.0014213	456.79255750887523	35.219	1.7546	35.6	35.098	36.853	0.3812					157	44	4	0	0	0	0.7932	1	2667	2667		25.45	1.2474	1	7423700			3103	5312	2056	2059	3591	3591					0.10984716596760791
AVLEPLLVIL	10	Unmodified	_AVLEPLLVIL_					0	0	0		L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.3595581054688	2	540.357368	1078.70018	-0.017297	-9.3466E-06	2.5708	0.0013891	2.5535	0.0013798	540.3585627881598	36.881	1.2861	36.905	36.409	37.695	0.023624					76	34	3	0	0	0	0.85438	1	2090	2090		16.473	4.9621	1	515190			3104	14665	2057	2060	3592	3592					0.16398107244822313
AVLEPLLVIL	10	Unmodified	_AVLEPLLVIL_					0	0	0		L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.3588256835938	2	540.357368	1078.70018	0.33888	0.00018312	2.2349	0.0012076	2.5738	0.0013908	540.3583651603944	36.668	1.2319	36.608	36.237	37.469	-0.060333					76	35	3	0	0	0	0.88945	1	2062	2062		10.866	4.13	1	376760			3105	14665	2057	2060	3593	3593					0.16398107244822313
AVLGTLLPV	9	Unmodified	_AVLGTLLPV_					0	0	0		ENST00000357635.9_1_15:75194880-75195063:-|nuORF	ENST00000357635.9_1_15:75194880-75195063:-|nuORF	ENST00000357635.9_1_15:75194880-75195063:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7878112792969	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.7932	1	2490	2490		14.664	0	1	12467000			3106	10392	2058	2061	3594	3594					0.11308733942337312
AVLHNLRIRFA	11	Unmodified	_AVLHNLRIRFA_					0	0	0		nc|ENSG00000128833|Q9NQX4-2|MYO5C;ENSG00000128833|ENST00000261839|MYO5C;ENST00000541028.5_1_15:52553308-52587917:-|nuORF	nc|ENSG00000128833|Q9NQX4-2|MYO5C	nc|ENSG00000128833|Q9NQX4-2|MYO5C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2667236328125	3	437.266568	1308.77787	0.31383	0.00013723	2.5449	0.0011128	2.8587	0.00125	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.7896	1	4343	4343		13.508	0.55046	1	2521600			3107	3563	2059	2062	3595	3595					0.13583557953529635
AVLIAVPAA	9	Unmodified	_AVLIAVPAA_					0	0	0			REV__ENSG00000060642|ENST00000674202|PIGV	REV__ENSG00000060642|ENST00000674202|PIGV	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7672424316406	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.72098	1	2608	2608		39.021	0	1	2097300	+		3108	16449	2060	2063	3596	3596					0.0979217825380374
AVLIAVPAA	9	Unmodified	_AVLIAVPAA_					0	0	0			REV__ENSG00000060642|ENST00000674202|PIGV	REV__ENSG00000060642|ENST00000674202|PIGV	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7671203613281	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.72098	2	2526	2526;2562		39.021	0	1	2034000	+		3109	16449	2060	2063	3597;3598	3597					0.0979217825380374
AVLIIPQIRDN	11	Unmodified	_AVLIIPQIRDN_					0	0	0			REV__ENSG00000001561|ENST00000321037|ENPP4	REV__ENSG00000001561|ENST00000321037|ENPP4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.6054382324219	3	417.918834	1250.73467	2.3021	0.00096208	1.7796	0.00074371	4.0816	0.0017058	417.9196904089325	50.362	2.6464	50.366	48.15	50.796	0.0038681					92	62	2	0	0	0	0.17375	1	4242	4242		13.508	7.1871	1	75228	+		3110	16040	2061	2064	3599	3599					0.11933323385642325
AVLIPVLSYT	10	Unmodified	_AVLIPVLSYT_					0	0	0		ENST00000361505.9_1_14:20944805-20945120:+|nuORF	ENST00000361505.9_1_14:20944805-20945120:+|nuORF	ENST00000361505.9_1_14:20944805-20945120:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3272094726562	2	538.323525	1074.6325	3.4335	0.0018483	2.8142	0.001515	6.2477	0.0033633	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.86305	1	11254	11254		31.955	1.4512	1	75550000			3111	10479	2062	2065	3600	3600					0.09816657313990618
AVLIPVLSYT	10	Unmodified	_AVLIPVLSYT_					0	0	0		ENST00000361505.9_1_14:20944805-20945120:+|nuORF	ENST00000361505.9_1_14:20944805-20945120:+|nuORF	ENST00000361505.9_1_14:20944805-20945120:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3258666992188	2	538.323525	1074.6325	3.5618	0.0019174	3.4053	0.0018331	6.967	0.0037505	538.3252790877391	103.43	1.149	103.39	103.04	104.18	-0.043755					64	27	3	0	0	0	0.86589	1	11315	11315		29.15	3.5755	1	1012900			3112	10479	2062	2065	3601	3601					0.09816657313990618
AVLIPVLSYT	10	Unmodified	_AVLIPVLSYT_					0	0	0		ENST00000361505.9_1_14:20944805-20945120:+|nuORF	ENST00000361505.9_1_14:20944805-20945120:+|nuORF	ENST00000361505.9_1_14:20944805-20945120:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3270263671875	2	538.323525	1074.6325	3.5632	0.0019181	3.6305	0.0019544	7.1937	0.0038725	538.3254567289116	104.65	1.3425	104.61	103.89	105.23	-0.04039					91	31	4	0	0	0	0.86589	1	11550	11550		29.15	6.1071	1	777430			3113	10479	2062	2065	3602	3602					0.09816657313990618
AVLIYPDKL	9	Unmodified	_AVLIYPDKL_					0	0	0			REV__nc|ENSG00000036565|P54219-2|SLC18A1	REV__nc|ENSG00000036565|P54219-2|SLC18A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.314453125	2	516.310418	1030.60628	3.1012	0.0016012	3.8274	0.0019761	6.9286	0.0035773	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.74721	1	12844	12844		37.159	5.2042	1	1162600	+		3114	16294	2063	2066	3603	3603					0.09220388142512093
AVLKDHTKIRA	11	Unmodified	_AVLKDHTKIRA_					0	0	0		nc|ENSG00000137337|Q14676-3|MDC1;ENSG00000137337|ENST00000376406|MDC1;nc|ENSG00000137337|Q14676-2|MDC1;nc|ENSG00000137337|Q14676-4|MDC1	nc|ENSG00000137337|Q14676-3|MDC1	nc|ENSG00000137337|Q14676-3|MDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.92205810546875	3	417.922578	1250.7459	2.409	0.0010068	-3.2333	-0.0013513	-0.82426	-0.00034448	417.9211491012133	105.29	1.9486	105.45	104.96	106.91	0.15584					170	67	4	0	0	0	0.74022	1	12801	12801		24.232	9.453	1	526200			3115	4191	2064	2067	3604	3604					0.1305614547973164
AVLKILAPS	9	Unmodified	_AVLKILAPS_					0	0	0		nc|ENSG00000211821|A0JD36|TRDV2	nc|ENSG00000211821|A0JD36|TRDV2	nc|ENSG00000211821|A0JD36|TRDV2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3015441894531	2	456.299853	910.585153	0.11809	5.3885E-05	2.2455	0.0010246	2.3636	0.0010785	456.3007564830729	46.759	1.8735	46.745	45.791	47.665	-0.013821					101	50	3	0	0	0	0.74721	1	3765	3765		37.159	1.9584	1	299420			3116	15239	2065	2068	3605	3605					0.1262842283366581
AVLKKGRWLE	10	Unmodified	_AVLKKGRWLE_					0	0	0			REV__ENSG00000099331|ENST00000682292|MYO9B	REV__ENSG00000099331|ENST00000682292|MYO9B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.57989501953125	3	400.580152	1198.71863	3.4049	0.0013639	-2.6085	-0.0010449	0.79644	0.00031904	400.5790813057724	111.94	0.27284	111.98	111.85	112.12	0.041832					15	8	2	0	0	0	0.86621	1	13540	13540		26.063	4.3776	1	217270	+		3117	17092	2066	2069	3606	3606					0.1272166193934936
AVLKKSREG	9	Unmodified	_AVLKKSREG_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.3009033203125	2	494.300916	986.587279	-0.0748	-3.6974E-05	-0.3174	-0.00015689	-0.3922	-0.00019387	494.30075143902303	97.483	4.0876	97.54	96.775	100.86	0.056839					393	94	6	0	0	0	0.76255	1	10426	10426		35.618	2.8059	1	54076000			3118	2816	2067	2070	3607	3607					0.09344851571484014
AVLKKSREG	9	Unmodified	_AVLKKSREG_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30072021484375	2	494.300916	986.587279	-0.58723	-0.00029027	0.13313	6.5808E-05	-0.4541	-0.00022446	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.78058	1	10242	10242		30.504	0	1	65263000			3119	2816	2067	2070	3608	3608					0.09344851571484014
AVLKKSREG	9	Unmodified	_AVLKKSREG_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.3008728027344	2	494.300916	986.587279	0.88078	0.00043537	-1.0905	-0.00053901	-0.20967	-0.00010364	494.3002880194073	97.072	3.8769	97.462	96.82	100.7	0.39066					309	95	6	0	0	0	0.78536	1	11790	11790		29.15	0	1	27149000			3120	2816	2067	2070	3609	3609					0.09344851571484014
AVLKLQDWEL	10	Unmodified	_AVLKLQDWEL_					0	0	0		ENSG00000151422|ENST00000281092|FER;ENST00000502752.1_1_5:108133871-108177539:+|nuORF	ENSG00000151422|ENST00000281092|FER	ENSG00000151422|ENST00000281092|FER	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5645446777344	3	405.564168	1213.67067	-1.5858	-0.00064316	2.9135	0.0011816	1.3277	0.00053847	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.85939	1	5209	5209		21.686	0	1	181560			3121	5116	2068	2071	3610	3610					0.07238543228686467
AVLKPGAWSRK	11	Unmodified	_AVLKPGAWSRK_					0	0	0		ENST00000308521.9_1_22:39436844-39436913:+|nuORF	ENST00000308521.9_1_22:39436844-39436913:+|nuORF	ENST00000308521.9_1_22:39436844-39436913:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.9120178222656	3	404.911902	1211.71388	0.071013	2.8754E-05	0.17042	6.9006E-05	0.24143	9.776E-05	404.91191633695087	30.689	1.6693	30.718	30.008	31.677	0.028618					77	37	4	0	0	0	0.34435	2	2017	2005;2017		63.694	16.466	1	1936500			3122	9889	2069	2072	3611;3612	3612					0.11648777796585819
AVLKPGAWSRK	11	Unmodified	_AVLKPGAWSRK_					0	0	0		ENST00000308521.9_1_22:39436844-39436913:+|nuORF	ENST00000308521.9_1_22:39436844-39436913:+|nuORF	ENST00000308521.9_1_22:39436844-39436913:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.9120178222656	3	404.911902	1211.71388	-0.012951	-5.244E-06	0.33498	0.00013564	0.32202	0.00013039	404.9119506129139	30.734	0.95654	30.737	30.36	31.317	0.0037212					58	21	5	0	0	0	0.33092	2	2047	2025;2047		66.92	8.2403	1	2307500			3123	9889	2069	2072	3613;3614	3614					0.11648777796585819
AVLLEALAL	9	Unmodified	_AVLLEALAL_					0	0	0		ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7930603027344	2	456.791861	911.569169	0.90302	0.00041249	1.9801	0.00090447	2.8831	0.001317	456.792654311578	37.107	0.83018	37.593	36.916	37.747	0.48581					79	19	5	0	0	0	0.67235	1	2961	2961		42.474	5.446	1	4180400			3124	2595	2070	2073	3615	3615					0.10984716596738053
AVLLKSPP	8	Unmodified	_AVLLKSPP_					0	0	0		nc|ENSG00000134326|Q5EBM0-3|CMPK2;nc|ENSG00000134326|Q5EBM0-4|CMPK2;ENSG00000134326|ENST00000256722|CMPK2	nc|ENSG00000134326|Q5EBM0-3|CMPK2	nc|ENSG00000134326|Q5EBM0-3|CMPK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7668762207031	2	412.765646	823.516739	-0.21056	-8.6912E-05	2.569	0.0010604	2.3584	0.00097348	412.76685422643334	40.116	1.6377	40.068	39.082	40.719	-0.04789					115	51	3	0	0	0	0.8347	1	2493	2493		23.042	1.0826	1	699640			3125	3930	2071	2074	3616	3616					0.0979217825380374
AVLLLDGLL	9	Unmodified	_AVLLLDGLL_					0	0	0		ENST00000321599.8_2_3:49763572-49763743:-|nuORF	ENST00000321599.8_2_3:49763572-49763743:-|nuORF	ENST00000321599.8_2_3:49763572-49763743:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.8007507324219	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.7932	1	3705	3705		19.36	1.0356	1	5050800			3126	10040	2072	2075	3617	3617					0.11905003113804469
AVLLLSLPS	9	Unmodified	_AVLLLSLPS_					0	0	0		ENSG00000139540|ENST00000454355|SLC39A5	ENSG00000139540|ENST00000454355|SLC39A5	ENSG00000139540|ENST00000454355|SLC39A5	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79095458984375	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.692	1	45.706	45.206	46.206	0.013306								0	0	0	0.31472	1	3307	3307		25.45	2.4077	1				3127	4376	2073	2076	3618	3618					0.10984716596760791
AVLLLVSFSSK	11	Unmodified	_AVLLLVSFSSK_					0	0	0			REV__ENST00000459971.1_1_22:17565981-17578023:+|nuORF	REV__ENST00000459971.1_1_22:17565981-17578023:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3534545898438	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.73893	1	12495	12495		24.519	0.99649	1	3937500	+		3128	26993	2074	2077	3619	3619					0.12132017751082458
AVLLPIGAA	9	Unmodified	_AVLLPIGAA_					0	0	0			REV__nc|ENSG00000197430|Q96PE5-3|OPALIN	REV__nc|ENSG00000197430|Q96PE5-3|OPALIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.766845703125	2	412.765646	823.516739	0.2674	0.00011037	3.4179	0.0014108	3.6853	0.0015212	412.76694459903433	48.848	3.1893	48.886	47.742	50.932	0.037731					149	88	4	0	0	0	0.7932	1	3751	3751		21.702	2.3424	1	734040	+		3129	23230	2075	2078	3620	3620					0.0979217825380374
AVLLSLLLLP	10	Unmodified	_AVLLSLLLLP_					0	0	0			REV__ENST00000475124.1_1_3:53892553-53899332:+|nuORF	REV__ENST00000475124.1_1_3:53892553-53899332:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3605346679688	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.86452	1	2350	2350		30.504	0	1	2871800	+		3130	16422	2076	2079	3621	3621					0.18194411107424457
AVLLVGALGV	10	Unmodified	_AVLLVGALGV_					0	0	0			REV__nc|ENSG00000185920|Q13635-2|PTCH1;REV__nc|ENSG00000117425|Q9Y6C5-2|PTCH2	REV__nc|ENSG00000185920|Q13635-2|PTCH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.8725891113281	2	456.299853	910.585153	-0.16045	-7.3211E-05	2.2597	0.0010311	2.0993	0.0009579	456.300722434816	36.697	1.2435	36.978	36.511	37.755	0.28173					45	29	3	0	0	0	0.37624	1	2894	2894		35.201	8.4046	1	414490	+		3131	30103;18261	2077	2080	3622	3622					0.1262842283365444
AVLLYVSS	8	Unmodified	_AVLLYVSS_					0	0	0		ENSG00000108797|ENST00000264638|CNTNAP1	ENSG00000108797|ENST00000264638|CNTNAP1	ENSG00000108797|ENST00000264638|CNTNAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.2454528808594	2	426.247286	850.48002	0.61593	0.00026254	-3.4632	-0.0014762	-2.8473	-0.0012137	426.24572360202285	87.518	4.0945	87.668	85.602	89.696	0.14956					180	96	4	0	0	0	0.86791	1	8609	8609		28.254	4.0515	1	3688500			3132	2431	2078	2081	3623	3623					0.04879881637248218
AVLNPWKLS	9	Unmodified	_AVLNPWKLS_					0	0	0			REV__ENST00000568712.1_1_15:79063704-79103562:-|nuORF	REV__ENST00000568712.1_1_15:79063704-79103562:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.2974853515625	2	514.300384	1026.58622	-0.73299	-0.00037698	-2.7471	-0.0014128	-3.4801	-0.0017898	514.2990191535417	96.746	3.1495	96.746	95.529	98.678	0					118	74	2	0	0	0	0.76764	1	9648	9648		34.173	5.0025	1	424760	+		3133	28903	2079	2082	3624	3624					0.07398637202550162
AVLPRIWQ	8	Unmodified	_AVLPRIWQ_					0	0	0			REV__ENSG00000164168|ENST00000296582|TMEM184C	REV__ENSG00000164168|ENST00000296582|TMEM184C	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7964782714844	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.709	1	66.835	66.335	67.335	0.12649								0	0	0	0.29452	1	5937	5937		33.516	5.2613	1		+		3134	21043	2080	2083	3625	3625					0.08446074267999393
AVLPSPVE	8	Unmodified	_AVLPSPVE_					0	0	0		ENSG00000149243|ENST00000539798|KLHL35;ENST00000460787.1_1_11:75133626-75136632:-|nuORF	ENSG00000149243|ENST00000539798|KLHL35	ENSG00000149243|ENST00000539798|KLHL35	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7850646972656	2	406.231636	810.448719	2.7293	0.0011087	-0.4122	-0.00016745	2.3171	0.00094129	406.2312386485519	30.092	0.39016	30.077	29.891	30.281	-0.015167					13	8	2	0	0	0	0.4196	1	1551	1551		12.207	0	1	14236			3135	5008	2081	2084	3626	3626					0.035913086031428065
AVLPTAIPL	9	Unmodified	_AVLPTAIPL_					0	0	0			REV__nc|ENSG00000172782|Q8N9I5-2|FADS6	REV__nc|ENSG00000172782|Q8N9I5-2|FADS6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.78759765625	2	447.786579	893.558604	-0.98945	-0.00044306	3.8599	0.0017284	2.8705	0.0012854	447.7882068509446	38.313	0.55577	38.655	38.341	38.896	0.34187					32	13	3	0	0	0	0.7932	1	3167	3167		19.36	1.0356	1	805840	+		3136	21856	2082	2085	3627	3627					0.1075673394233263
AVLQLERRRWA	11	Unmodified	_AVLQLERRRWA_					0	0	0			REV__ENST00000305850.9_1_16:81040735-81040858:+|nuORF	REV__ENST00000305850.9_1_16:81040735-81040858:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.60772705078125	3	466.608993	1396.80515	0.32068	0.00014963	-2.4743	-0.0011545	-2.1536	-0.0010049	466.60769889886956	100.37	2.2833	100.42	99.018	101.3	0.046356					147	53	4	0	0	0	0.76579	1	10688	10688		18.531	2.0012	1	458180	+		3137	24821	2083	2086	3628	3628					0.12262041493931974
AVLQLYHFLLE	11	Unmodified	_AVLQLYHFLLE_					0	0	0			REV__ENSG00000175294|ENST00000312106|CATSPER1	REV__ENSG00000175294|ENST00000312106|CATSPER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2542419433594	3	449.255334	1344.74417	-1.272	-0.00057144	3.8552	0.001732	2.5832	0.0011605	449.2569549387688	43.967	0.61199	44.418	44.12	44.732	0.45024					35	14	3	0	0	0	0.71207	1	4013	4013		29.551	3.659	1	1142000	+		3138	22057	2084	2087	3629	3629					0.08559091671122587
AVLQLYHFLLE	11	Unmodified	_AVLQLYHFLLE_					0	0	0			REV__ENSG00000175294|ENST00000312106|CATSPER1	REV__ENSG00000175294|ENST00000312106|CATSPER1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	449.255334	1344.74417	-1.272	-0.00057144	3.8552	0.001732	2.5832	0.0011605	449.2569549387688	43.967	0.61199	44.418	44.12	44.732	0.45024	-0.032587	4.5285E-05	NaN	29.551	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1142000	+		3139	22057	2084	2087							0.08559091671122587
AVLQLYHFLLE	11	Unmodified	_AVLQLYHFLLE_					0	0	0			REV__ENSG00000175294|ENST00000312106|CATSPER1	REV__ENSG00000175294|ENST00000312106|CATSPER1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	449.255334	1344.74417	-1.4593	-0.00065558	3.7896	0.0017025	2.3304	0.0010469	449.2569623624977	43.709	0.61015	44.483	44.223	44.833	0.7738	0.032587	-4.306E-05	NaN	29.551	36	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1208000	+		3140	22057	2084	2087							0.08559091671122587
AVLRCLLQP	9	Unmodified	_AVLRCLLQP_					0	0	0		nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80;ENSG00000144406|ENST00000673920|UNC80;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80	nc|ENSG00000144406|Q8N2C7-7|UNC80	nc|ENSG00000144406|Q8N2C7-7|UNC80	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7994079589844	2	506.802237	1011.58992	-1.5362	-0.00077856	-1.1726	-0.0005943	-2.7089	-0.0013729	506.8015777288388	44.442	2.8102	44.442	42.605	45.415	0					120	68	3	0	0	0	0.51307	2	3267	3267;3322		51.335	15.717	1	386210			3141	4705	2085	2088	3630;3631	3630					0.08458983704770162
AVLRCLLQP	9	Unmodified	_AVLRCLLQP_					0	0	0		nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80;ENSG00000144406|ENST00000673920|UNC80;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80	nc|ENSG00000144406|Q8N2C7-7|UNC80	nc|ENSG00000144406|Q8N2C7-7|UNC80	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8003234863281	2	506.802237	1011.58992	0.2762	0.00013998	-2.9987	-0.0015198	-2.7225	-0.0013798	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.78058	1	3578	3578		30.504	3.4563	1	416790			3142	4705	2085	2088	3632	3632					0.08458983704770162
AVLRCLLQP	9	Unmodified	_AVLRCLLQP_					0	0	0		nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80;ENSG00000144406|ENST00000673920|UNC80;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80	nc|ENSG00000144406|Q8N2C7-7|UNC80	nc|ENSG00000144406|Q8N2C7-7|UNC80	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.7987976074219	2	506.802237	1011.58992	-0.70541	-0.0003575	-0.85615	-0.0004339	-1.5616	-0.0007914	506.80168753367127	50.605	0.95612	50.613	49.947	50.903	0.0077438					42	26	2	0	0	0	0.7932	1	4303	4303		23.042	0	1	134860			3143	4705	2085	2088	3633	3633					0.08458983704770162
AVLRPSRSP	9	Unmodified	_AVLRPSRSP_					0	0	0			REV__ENSG00000116539|ENST00000392403|ASH1L	REV__ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7955627441406	2	491.793258	981.571963	0.28747	0.00014138	3.582	0.0017616	3.8695	0.001903	491.7949445341918	43.378	1.3778	43.351	42.925	44.303	-0.026764					56	32	2	0	0	0	0.7932	1	3337	3337		20.947	0	1	173750	+		3144	18201	2086	2089	3634	3634					0.08043984774280943
AVLRRPVAPG	10	Unmodified	_AVLRRPVAPG_					0	0	0			REV__ENST00000371370.7_1_1:54411767-54412118:+|nuORF	REV__ENST00000371370.7_1_1:54411767-54412118:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.81103515625	2	518.324725	1034.6349	2.1254	0.0011016	4.4905	0.0023275	6.6159	0.0034292	518.8262130832794	100.37	0.20345	100.71	100.53	100.73	0.34591					6	4	2	0	0	0	0.37624	1	12175	12175		66.429	18.514	1	46348	+		3145	25684	2087	2090	3635	3635					0.11896550562323682
AVLSGLIVP	9	Unmodified	_AVLSGLIVP_					0	0	0		ENSG00000107518|ENST00000355044|ATRNL1;nc|ENSG00000107518|Q5VV63-2|ATRNL1	ENSG00000107518|ENST00000355044|ATRNL1	ENSG00000107518|ENST00000355044|ATRNL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.78033447265625	2	434.778754	867.542954	-0.14051	-6.1091E-05	3.4383	0.0014949	3.2978	0.0014338	434.7801225093181	38.257	1.3722	38.268	37.812	39.184	0.011173					116	31	4	0	0	0	0.76996	1	2719	2719		33.516	6.7195	1	2138600			3146	2347	2088	2091	3636	3636					0.10388447425282266
AVLSKPFAVSA	11	Unmodified	_AVLSKPFAVSA_					0	0	0			REV__ENSG00000174197|ENST00000703841|MGA	REV__ENSG00000174197|ENST00000703841|MGA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3172607421875	2	545.318774	1088.623	-0.68757	-0.00037494	-3.0506	-0.0016636	-3.7382	-0.0020385	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.67778	1	8438	8438		35.152	1.2304	1	3608000	+		3147	21979	2089	2092	3637	3637					0.08222889028479585
AVLSKPFAVSA	11	Unmodified	_AVLSKPFAVSA_					0	0	0			REV__ENSG00000174197|ENST00000703841|MGA	REV__ENSG00000174197|ENST00000703841|MGA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3184204101562	2	545.318774	1088.623	-1.3538	-0.00073823	-2.3594	-0.0012866	-3.7132	-0.0020249	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.638	1	10278	10278		40.058	6.1365	1	5184000	+		3148	21979	2089	2092	3638	3638					0.08222889028479585
AVLSLGELIEE	11	Unmodified	_AVLSLGELIEE_					0	0	0		ENST00000316509.10_2_17:8062733-8062859:-|nuORF	ENST00000316509.10_2_17:8062733-8062859:-|nuORF	ENST00000316509.10_2_17:8062733-8062859:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.82421875	2	586.824086	1171.63362	-0.26066	-0.00015296	-0.23691	-0.00013902	-0.49757	-0.00029198	586.8238105998267	110.35	1.3355	110.35	110.09	111.43	0					132	40	5	0	0	0	0.6921	1	11448	11448		32.812	2.3088	1	4860400			3149	9985	2090	2093	3639	3639					0.05466826892256904
AVLSLVIWYFV	11	Unmodified	_AVLSLVIWYFV_					0	0	0			REV__nc|ENSG00000198216|Q15878-2|CACNA1E	REV__nc|ENSG00000198216|Q15878-2|CACNA1E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2567138671875	3	437.256675	1308.7482	-0.16089	-7.0349E-05	1.662	0.00072671	1.5011	0.00065636	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.59499	1	10553	10553		45.022	15.471	1	727380	+		3150	23309	2091	2094	3640	3640					0.10617181164820977
AVLSPAARAR	10	Unmodified	_AVLSPAARAR_					0	0	0		ENST00000329421.7_1_1:32800654-32801959:-|nuORF	ENST00000329421.7_1_1:32800654-32801959:-|nuORF	ENST00000329421.7_1_1:32800654-32801959:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3103942871094	2	506.306532	1010.59851	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.348	1	43.405	42.905	43.905	0.056744								0	0	0	0.45132	1	2983	2983		25.574	1.3713	1				3151	10098	2092	2095	3641	3641					0.09363673665598071
AVLSWKLAK	9	Unmodified	_AVLSWKLAK_					0	0	0		ENSG00000188725|ENST00000339020|SMIM15	ENSG00000188725|ENST00000339020|SMIM15	ENSG00000188725|ENST00000339020|SMIM15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.3180847167969	2	508.318577	1014.6226	-0.81803	-0.00041582	1.0194	0.00051819	0.20139	0.00010237	508.3187822423311	46.996	0.39294	47.468	47.257	47.65	0.4714					15	8	3	0	0	0	0.48102	1	4453	4453		52.937	8.8199	1	667760			3152	7951	2093	2096	3642	3642					0.11587514099278451
AVLSWKLAK	9	Unmodified	_AVLSWKLAK_					0	0	0		ENSG00000188725|ENST00000339020|SMIM15	ENSG00000188725|ENST00000339020|SMIM15	ENSG00000188725|ENST00000339020|SMIM15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.31982421875	2	508.318577	1014.6226	-0.18833	-9.5733E-05	0.44833	0.00022789	0.26	0.00013216	508.31845403860007	46.767	0.4386	47.69	47.519	47.958	0.92315					13	9	2	0	0	0	0.48102	1	4438	4438		52.937	3.4952	1	629090			3153	7951	2093	2096	3643	3643					0.11587514099278451
AVLTDDPL	8	Unmodified	_AVLTDDPL_					0	0	0		nc|ENSG00000117245|Q9P2E2|KIF17;ENSG00000117245|ENST00000400463|KIF17;ENST00000477167.5_1_1:20991079-21011627:-|nuORF	nc|ENSG00000117245|Q9P2E2|KIF17	nc|ENSG00000117245|Q9P2E2|KIF17	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2308044433594	2	422.226551	842.438549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.029	1	62.136	61.636	62.636	0.10743								0	0	0	0.29452	1	5400	5400		33.516	1.5607	1				3154	2968	2094	2097	3644	3644					0.011027008779137759
AVLTFCLL	8	Unmodified	_AVLTFCLL_					0	0	0		ENSG00000169359|ENST00000643144|SLC33A1	ENSG00000169359|ENST00000643144|SLC33A1	ENSG00000169359|ENST00000643144|SLC33A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2553405761719	2	440.254057	878.493561	0.40702	0.00017919	2.7426	0.0012074	3.1496	0.0013866	440.25507557275375	63.556	1.6285	64.111	63.598	65.226	0.55449					91	38	4	0	0	0	0.87276	1	6930	6930		29.842	0	1	1465000			3155	6489	2095	2098	3645	3645					0.049454161448238665
AVLTKQLLH	9	Unmodified	_AVLTKQLLH_					0	0	0		nc|ENSG00000118816|Q14094-2|CCNI;ENSG00000118816|ENST00000237654|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.8211669921875	2	511.821484	1021.62842	-0.5682	-0.00029082	0.6085	0.00031144	0.040297	2.0625E-05	511.82158181874644	38.906	0.59342	39.46	39.153	39.746	0.5545					30	13	3	0	0	0	0.55097	1	3245	3245		49.442	5.3247	1	455470			3156	14868	2096	2099	3646	3646					0.11846612610952434
AVLTKRKRHA	10	Unmodified	_AVLTKRKRHA_					0	0	0			REV__ENSG00000167654|ENST00000450849|ATCAY	REV__ENSG00000167654|ENST00000450849|ATCAY	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.3731689453125	2	590.375281	1178.73601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.083	1	46.099	45.599	46.599	0.015514								0	0	0	0.45132	1	3361	3361		24.519	5.1592	1		+		3157	21411	2097	2100	3647	3647					0.15379002265058261
AVLTTVYC	8	Unmodified	_AVLTTVYC_					0	0	0		ENSG00000267221|ENST00000587304|C17orf113	ENSG00000267221|ENST00000587304|C17orf113	ENSG00000267221|ENST00000587304|C17orf113	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78057861328125	2	435.225497	868.43644	0.40527	0.00017638	2.1285	0.0009264	2.5338	0.0011028	435.2260341489967	37.756	0.25951	38.278	38.174	38.434	0.52236					9	6	2	0	0	0	0.4196	1	3097	3097		44.531	7.5026	1	44598			3158	8956	2098	2101	3648	3648					-0.003040511315475669
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7802429199219	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.89494	1	2493	2493		37.159	6.6555	1	3714500			3159	8677	2099	2102	3649	3649					0.10388447425293634
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801513671875	2	434.778754	867.542954	-0.97237	-0.00042277	4.234	0.0018408	3.2616	0.0014181	434.7805193577322	37.104	1.6925	37.05	36.066	37.758	-0.053555					155	37	5	0	0	0	0.884	1	2488	2488		33.516	0	1	5510500			3160	8677	2099	2102	3650	3650					0.10388447425293634
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77984619140625	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.89962	1	3872	3872		38.806	0	1	2468400			3161	8677	2099	2102	3651	3651					0.10388447425293634
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801513671875	2	434.778754	867.542954	0.15311	6.6568E-05	3.0229	0.0013143	3.176	0.0013809	434.7799826029187	37.007	1.7817	37.018	36.075	37.857	0.011173					164	39	5	0	0	0	0.884	1	2424	2424		33.516	0	1	5259900			3162	8677	2099	2102	3652	3652					0.10388447425293634
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7798767089844	2	434.778754	867.542954	1.3776	0.00059897	1.1215	0.0004876	2.4991	0.0010866	434.7791184687597	46.776	1.6866	46.772	46.112	47.798	-0.0041618					148	47	4	0	0	0	0.87479	1	3857	3857		30.504	0	1	2109000			3163	8677	2099	2102	3653	3653					0.10388447425293634
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799072265625	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.92457	1	2665	2665		47.916	0	1	2513700			3164	8677	2099	2102	3654	3654					0.10388447425293634
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77984619140625	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.9159	1	2934	2934		44.531	0	1	2537300			3165	8677	2099	2102	3655	3655					0.10388447425293634
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.884	1	2120	2120		33.516	0	1	4750000			3166	8677	2099	2102	3656	3656					0.10388447425293634
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799987792969	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.9159	1	3402	3402		44.531	0	1	2833200			3167	8677	2099	2102	3657	3657					0.10388447425293634
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7802734375	2	434.778754	867.542954	0.35961	0.00015635	3.3799	0.0014695	3.7395	0.0016259	434.78011136196255	36.165	2.4395	36.447	35.432	37.871	0.28173					211	60	5	0	0	0	0.884	1	2815	2815		33.516	0	1	8602100			3168	8677	2099	2102	3658	3658					0.10388447425293634
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7797546386719	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.87922	1	3722	3722		31.955	0	1	6567600			3169	8677	2099	2102	3659	3659					0.10388447425293634
AVLVEPKL	8	Unmodified	_AVLVEPKL_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7802734375	2	434.778754	867.542954	1.5094	0.00065624	1.8704	0.00081321	3.3798	0.0014694	434.7794635539601	36.504	1.1186	36.944	36.745	37.863	0.44043					77	26	3	0	0	0	0.92457	2	2864	2864;2900		50.025	0	1	5607300			3170	8677	2099	2102	3660;3661	3660					0.10388447425293634
AVLVGAVVP	9	Unmodified	_AVLVGAVVP_					0	0	0			REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.26800537109375	2	412.765646	823.516739	0.083741	3.4565E-05	3.0645	0.0012649	3.1483	0.0012995	412.7674653286621	46.16	3.1119	46.144	44.619	47.731	-0.016136					179	80	3	0	0	0	0.78292	1	3867	3867		29.842	4.3914	1	669160	+		3171	19188	2100	2103	3662	3662					0.09792178253815109
AVLVGAVVP	9	Unmodified	_AVLVGAVVP_					0	0	0			REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7660217285156	2	412.765646	823.516739	-1.0958	-0.00045233	2.7086	0.001118	1.6128	0.0006657	412.76710496522145	44.033	1.9061	43.999	42.844	44.75	-0.03347					106	44	3	0	0	0	0.7932	1	3396	3396		21.702	3.3779	1	328990	+		3172	19188	2100	2103	3663	3663					0.09792178253815109
AVLVGAVVP	9	Unmodified	_AVLVGAVVP_					0	0	0			REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7669372558594	2	412.765646	823.516739	-0.21056	-8.6912E-05	2.569	0.0010604	2.3584	0.00097348	412.76685422643334	40.116	1.6377	40.068	39.082	40.719	-0.04789					115	51	3	0	0	0	0.72098	1	2505	2505		39.021	0	1	699640	+		3173	19188	2100	2103	3664	3664					0.09792178253815109
AVLVGAVVP	9	Unmodified	_AVLVGAVVP_					0	0	0			REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7671203613281	2	412.765646	823.516739	0.89717	0.00037032	3.4112	0.001408	4.3084	0.0017783	412.7668074651512	37.697	0.64875	38.01	37.663	38.312	0.31312					30	16	2	0	0	0	0.20789	1	2992	2992		14.664	5.8418	1	670690	+		3174	19188	2100	2103	3665	3665					0.09792178253815109
AVLVGAVVP	9	Unmodified	_AVLVGAVVP_					0	0	0			REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	412.765646	823.516739	0.083741	3.4565E-05	3.0645	0.0012649	3.1483	0.0012995	412.7674653286621	46.16	3.1119	46.144	44.619	47.731	-0.016136	0.087821	-0.00064767	NaN	29.842	179	80	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	669160	+		3175	19188	2100	2103							0.09792178253815109
AVLVGAVVP	9	Unmodified	_AVLVGAVVP_					0	0	0			REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	412.765646	823.516739	-1.9069	-0.00078712	4.9608	0.0020477	3.0539	0.0012605	412.76786281101386	37.785	2.7778	37.802	36.528	39.306	0.016563	-0.026768	0.0010525	NaN	14.664	211	80	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1420800	+		3176	19188	2100	2103							0.09792178253815109
AVLVGAVVP	9	Unmodified	_AVLVGAVVP_					0	0	0			REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	412.765646	823.516739	-1.8913	-0.00078067	5.3808	0.002221	3.4895	0.0014403	412.76825028511877	46.022	3.0664	46.038	44.596	47.662	0.015511	-0.01868	0.0012645	NaN	29.842	171	83	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	630040	+		3177	19188	2100	2103							0.09792178253815109
AVLVGAVVP	9	Unmodified	_AVLVGAVVP_					0	0	0			REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	412.765646	823.516739	0.1009	4.1647E-05	4.4064	0.0018188	4.5072	0.0018604	412.7671097186311	45.501	0.73296	45.969	45.518	46.251	0.46813	-0.087168	0.00046006	NaN	29.842	22	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224750	+		3178	19188	2100	2103							0.09792178253815109
AVLVGAVVP	9	Unmodified	_AVLVGAVVP_					0	0	0			REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	412.765646	823.516739	0.33095	0.0001366	3.9933	0.0016483	4.3243	0.0017849	412.7670475176369	37.656	0.61684	38.142	37.704	38.321	0.48581	0.31307	0.00025379	NaN	14.664	38	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	613440	+		3179	19188	2100	2103							0.09792178253815109
AVLVGAVVP	9	Unmodified	_AVLVGAVVP_					0	0	0			REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	412.765646	823.516739	-0.74062	-0.0003057	4.6488	0.0019189	3.9082	0.0016132	412.76741266632587	45.243	0.93542	46.139	45.512	46.447	0.89542	0.082319	0.00066022	NaN	29.842	38	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	314570	+		3180	19188	2100	2103							0.09792178253815109
AVLVGNLLI	9	Unmodified	_AVLVGNLLI_					0	0	0		ENSG00000189181|ENST00000342623|OR14I1	ENSG00000189181|ENST00000342623|OR14I1	ENSG00000189181|ENST00000342623|OR14I1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30194091796875	2	456.299853	910.585153	-0.57201	-0.00026101	1.7645	0.00080516	1.1925	0.00054415	456.30048255320696	43.187	1.813	43.187	42.808	44.621	0.00016785					104	43	4	0	0	0	0.77546	1	3326	3326		31.955	0	1	672310			3181	7996	2101	2104	3666	3666					0.12628422833677178
AVLVKGLL	8	Unmodified	_AVLVKGLL_					0	0	0			REV__ENSG00000117868|ENST00000275418|ESYT2	REV__ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852783203125	2	406.783839	811.553125	0.20394	8.2959E-05	3.6434	0.0014821	3.8473	0.001565	406.7851787446003	29.647	1.7935	29.678	29.075	30.869	0.030947					149	52	4	0	0	0	0.87276	1	1476	1476		29.842	1.5873	1	789640	+		3182	18285	2102	2105	3667	3667					0.1398105515053203
AVLVKGLL	8	Unmodified	_AVLVKGLL_					0	0	0			REV__ENSG00000117868|ENST00000275418|ESYT2	REV__ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.785400390625	2	406.783839	811.553125	-0.34246	-0.00013931	4.1924	0.0017054	3.85	0.0015661	406.78540084150717	29.66	1.7951	29.616	28.901	30.696	-0.043095					140	52	4	0	0	0	0.82464	1	1568	1568		21.702	0	1	985720	+		3183	18285	2102	2105	3668	3668					0.1398105515053203
AVLVKGLL	8	Unmodified	_AVLVKGLL_					0	0	0			REV__ENSG00000117868|ENST00000275418|ESYT2	REV__ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853698730469	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.80963	1	1800	1800		15.636	0	1	1953100	+		3184	18285	2102	2105	3669	3669					0.1398105515053203
AVLVKGLL	8	Unmodified	_AVLVKGLL_					0	0	0			REV__ENSG00000117868|ENST00000275418|ESYT2	REV__ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7851867675781	2	406.783839	811.553125	2.7329	0.0011117	1.0571	0.00043001	3.79	0.0015417	406.7841375125675	29.651	1.9122	29.636	28.895	30.807	-0.015167					147	57	4	0	0	0	0.82464	1	1486	1486		21.702	1.2205	1	914260	+		3185	18285	2102	2105	3670	3670					0.1398105515053203
AVLVKGLL	8	Unmodified	_AVLVKGLL_					0	0	0			REV__ENSG00000117868|ENST00000275418|ESYT2	REV__ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853088378906	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.81548	1	1265	1265		20.482	0	1	1410200	+		3186	18285	2102	2105	3671	3671					0.1398105515053203
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78009033203125	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.89962	2	2373	2373;2397		45.952	12.436	1	3714500	+		3187	23503	2103	2106	3672;3673	3672					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77960205078125	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.90465	1	3078	3078		40.573	1.7665	1	2938700	+		3188	23503	2103	2106	3674	3674					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77960205078125	2	434.778754	867.542954	0.20501	8.9135E-05	2.1081	0.00091654	2.3131	0.0010057	434.77952396468385	43.343	2.099	43.316	42.291	44.39	-0.026768					151	50	4	0	0	0	0.91977	1	3253	3253		45.952	5.3793	1	2133200	+		3189	23503	2103	2106	3675	3675					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77935791015625	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.85277	3	3628	3509;3628;3640		50.025	2.1089	1	1294000	+		3190	23503	2103	2106	3676;3677;3678	3677					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7799377441406	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.91472	1	3801	3801		44.117	1.6423	1	2017500	+		3191	23503	2103	2106	3679	3679					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7775573730469	2	434.778754	867.542954	-0.72462	-0.00031505	3.8898	0.0016912	3.1652	0.0013761	434.78037611122505	35.149	1.2526	35.093	34.81	36.063	-0.056381					100	28	4	0	0	0	0.85277	1	2356	2356		25.45	1.2474	1	2671400	+		3192	23503	2103	2106	3680	3680					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796936035156	2	434.778754	867.542954	-1.2494	-0.00054321	3.5325	0.0015359	2.2831	0.00099266	434.7801616022163	41.477	1.7868	41.436	40.922	42.709	-0.04081					147	45	4	0	0	0	0.87922	3	3139	3139;3163;3272		44.117	5.3107	1	2800900	+		3193	23503	2103	2106	3681;3682;3683	3681					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7802429199219	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.91005	1	2096	2096		42.474	1.9018	1	3951300	+		3194	23503	2103	2106	3684	3684					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801513671875	2	434.778754	867.542954	0.15311	6.6568E-05	3.0229	0.0013143	3.176	0.0013809	434.7799826029187	37.007	1.7817	37.018	36.075	37.857	0.011173					164	39	5	0	0	0	0.90465	1	2436	2436		40.573	1.7665	1	5259900	+		3195	23503	2103	2106	3685	3685					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.779052734375	2	434.778754	867.542954	0.085891	3.7343E-05	2.526	0.0010983	2.6119	0.0011356	434.77973178522114	39.697	1.6335	39.706	39.141	40.774	0.0092812					137	39	4	0	0	0	0.89494	1	2883	2883		37.159	0.13063	1	4100400	+		3196	23503	2103	2106	3686	3686					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7799377441406	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.90465	1	3121	3121		40.573	1.7665	1	2766200	+		3197	23503	2103	2106	3687	3687					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7790222167969	2	434.778754	867.542954	1.0906	0.00047416	1.4824	0.00064451	2.573	0.0011187	434.77927379886756	45.133	1.9101	45.129	44.288	46.198	-0.0041618					129	44	4	0	0	0	0.89962	1	3679	3679		38.806	6.8513	1	1333000	+		3198	23503	2103	2106	3688	3688					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77984619140625	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.884	1	3256	3256		33.516	1.5607	1	1177900	+		3199	23503	2103	2106	3689	3689					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7797546386719	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.87479	1	3341	3341		30.504	5.0535	1	2364100	+		3200	23503	2103	2106	3690	3690					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.778564453125	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.8347	3	1921	1880;1907;1921		31.955	1.4512	1	2251100	+		3201	23503	2103	2106	3691;3692;3693	3693					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7803955078125	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.884	1	2045	2045		33.516	1.5607	1	4737100	+		3202	23503	2103	2106	3694	3694					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78021240234375	2	434.778754	867.542954	0.18498	8.0427E-05	2.9584	0.0012863	3.1434	0.0013667	434.7799222967292	39.501	1.6389	39.589	38.953	40.592	0.088375					151	45	4	0	0	0	0.92973	1	2442	2442		50.025	2.1089	1	4736600	+		3203	23503	2103	2106	3695	3695					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7798767089844	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.87922	2	3243	3150;3243		33.516	1.5607	1	1327200	+		3204	23503	2103	2106	3696;3697	3697					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.87922	1	3468	3468		31.955	1.4512	1	2750200	+		3205	23503	2103	2106	3698	3698					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77984619140625	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.884	1	3766	3766		33.516	1.5607	1	1986600	+		3206	23503	2103	2106	3699	3699					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7800598144531	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.87922	2	2332	2193;2332		33.516	2.8053	1	2486400	+		3207	23503	2103	2106	3700;3701	3701					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7802429199219	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.90465	2	3447	3343;3447		42.396	10.441	1	2833200	+		3208	23503	2103	2106	3702;3703	3703					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7807922363281	2	434.778754	867.542954	0.35961	0.00015635	3.3799	0.0014695	3.7395	0.0016259	434.78011136196255	36.165	2.4395	36.447	35.432	37.871	0.28173					211	60	5	0	0	0	0.91977	1	2733	2733		45.952	1.4209	1	8602100	+		3209	23503	2103	2106	3704	3704					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77752685546875	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.87922	1	3470	3470		31.955	1.4512	1	17256000	+		3210	23503	2103	2106	3705	3705					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77972412109375	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.87479	2	3587	3587;3616		31.955	1.4512	1	6567600	+		3211	23503	2103	2106	3706;3707	3706					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7789306640625	2	434.778754	867.542954	-0.97799	-0.00042521	2.2819	0.00099211	1.3039	0.0005669	434.7796012796187	43.693	1.006	44.143	43.436	44.442	0.45024					66	24	3	0	0	0	0.87479	1	4001	4001		30.504	6.3009	1	2290300	+		3212	23503	2103	2106	3708	3708					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78033447265625	2	434.778754	867.542954	1.7459	0.00075909	2.0876	0.00090764	3.8335	0.0016667	434.7795583562852	36.032	2.5113	36.473	35.233	37.744	0.44043					149	62	4	0	0	0	0.89962	2	2827	2733;2827		40.573	1.7665	1	9979000	+		3213	23503	2103	2106	3709;3710	3710					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7802429199219	2	434.778754	867.542954	1.5094	0.00065624	1.8704	0.00081321	3.3798	0.0014694	434.7794635539601	36.504	1.1186	36.944	36.745	37.863	0.44043					77	26	3	0	0	0	0.91005	1	2888	2888		42.474	1.9018	1	5607300	+		3214	23503	2103	2106	3711	3711					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7798767089844	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.89962	1	3838	3838		38.806	1.7777	1	6824500	+		3215	23503	2103	2106	3712	3712					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77923583984375	2	434.778754	867.542954	-1.4872	-0.00064659	2.9694	0.001291	1.4823	0.00064445	434.7799081673859	43.398	0.96524	44.172	43.498	44.463	0.7738					64	23	3	0	0	0	0.84341	1	3874	3874		24.203	1.1603	1	2227600	+		3216	23503	2103	2106	3713	3713					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78009033203125	2	434.778754	867.542954	-0.91901	-0.00039957	3.2028	0.0013925	2.2837	0.00099292	434.7800246732522	44.2	1.4198	45.044	44.534	45.954	0.84437					118	34	4	0	0	0	0.89962	1	4046	4046		38.806	5.2906	1	4932000	+		3217	23503	2103	2106	3714	3714					0.10388447425282266
AVLVKLEP	8	Unmodified	_AVLVKLEP_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7800598144531	2	434.778754	867.542954	-0.35442	-0.0001541	2.9005	0.0012611	2.5461	0.001107	434.7798953065686	45.578	1.4443	46.473	45.883	47.327	0.89542					104	35	4	0	0	0	0.884	1	4273	4273		33.516	1.5607	1	4040300	+		3218	23503	2103	2106	3715	3715					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7796630859375	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.87922	1	2767	2767		31.955	3.7006	1	2581600	+		3219	22567	2104	2107	3716	3716					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7796936035156	2	434.778754	867.542954	-1.8344	-0.00079754	4.3253	0.0018805	2.4909	0.001083	434.7805085345101	43.07	1.706	43.07	42.535	44.241	0					126	41	4	0	0	0	0.90465	1	3037	3037		40.573	0	1	2514600	+		3220	22567	2104	2107	3717	3717					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801208496094	2	434.778754	867.542954	-0.14252	-6.1964E-05	3.501	0.0015222	3.3585	0.0014602	434.78017454908985	35.066	1.262	35.054	34.849	36.111	-0.012203					110	29	4	0	0	0	0.87479	1	2194	2194		30.504	1.3541	1	2804500	+		3221	22567	2104	2107	3718	3718					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7802429199219	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.87922	2	2409	2409;2421		33.516	1.5607	1	3714500	+		3222	22567	2104	2107	3719;3720	3719					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77996826171875	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.89494	1	3473	3473		37.159	1.9584	1	1294000	+		3223	22567	2104	2107	3721	3721					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7800598144531	2	434.778754	867.542954	0.023581	1.0252E-05	2.6379	0.0011469	2.6615	0.0011571	434.7797629333649	48.108	2.6391	48.098	47.574	50.213	-0.0093269					205	68	4	0	0	0	0.90465	1	3985	3985		40.573	5.3719	1	2315200	+		3224	22567	2104	2107	3722	3722					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801208496094	2	434.778754	867.542954	-0.97237	-0.00042277	4.234	0.0018408	3.2616	0.0014181	434.7805193577322	37.104	1.6925	37.05	36.066	37.758	-0.053555					155	37	5	0	0	0	0.87922	2	2500	2500;2512		40.573	0	1	5510500	+		3225	22567	2104	2107	3723;3724	3723					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801818847656	2	434.778754	867.542954	0.15311	6.6568E-05	3.0229	0.0013143	3.176	0.0013809	434.7799826029187	37.007	1.7817	37.018	36.075	37.857	0.011173					164	39	5	0	0	0	0.87922	2	2412	2412;2448		31.955	0	1	5259900	+		3226	22567	2104	2107	3725;3726	3725					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7794494628906	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.87922	1	3442	3442		31.955	0	1	2165200	+		3227	22567	2104	2107	3727	3727					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77978515625	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.91005	1	2956	2956		42.474	1.9018	1	2537300	+		3228	22567	2104	2107	3728	3728					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77978515625	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.85277	1	3220	3220		25.45	1.2474	1	1327200	+		3229	22567	2104	2107	3729	3729					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78009033203125	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.92457	1	3489	3489		47.916	1.9636	1	2750200	+		3230	22567	2104	2107	3730	3730					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.87922	1	3633	3633		31.955	0	1	1986600	+		3231	22567	2104	2107	3731	3731					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799377441406	2	434.778754	867.542954	-0.29603	-0.00012871	3.1388	0.0013647	2.8428	0.001236	434.77998100939635	44.91	1.6932	44.842	44.077	45.77	-0.068634					139	41	4	0	0	0	0.884	1	3165	3165		33.516	1.5607	1	1190800	+		3232	22567	2104	2107	3732	3732					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77960205078125	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.884	1	3614	3614		33.516	1.5607	1	2175000	+		3233	22567	2104	2107	3733	3733					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.780029296875	2	434.778754	867.542954	-0.61408	-0.00026699	3.3286	0.0014472	2.7146	0.0011802	434.78015323105376	52.924	3.3917	52.849	52.471	55.862	-0.074512					147	100	2	0	0	0	0.89043	1	4371	4371		35.618	10.168	1	526750	+		3234	22567	2104	2107	3734	3734					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7806701660156	2	434.778754	867.542954	0.35961	0.00015635	3.3799	0.0014695	3.7395	0.0016259	434.78011136196255	36.165	2.4395	36.447	35.432	37.871	0.28173					211	60	5	0	0	0	0.87479	3	2770	2770;2839;2901		42.474	2.2494	1	8602100	+		3235	22567	2104	2107	3735;3736;3737	3735					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801818847656	2	434.778754	867.542954	1.7459	0.00075909	2.0876	0.00090764	3.8335	0.0016667	434.7795583562852	36.032	2.5113	36.473	35.233	37.744	0.44043					149	62	4	0	0	0	0.884	2	2815	2815;2851		33.516	1.5607	1	9979000	+		3236	22567	2104	2107	3738;3739	3738					0.10388447425282266
AVLVKPIE	8	Unmodified	_AVLVKPIE_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7795715332031	2	434.778754	867.542954	-0.35442	-0.0001541	2.9005	0.0012611	2.5461	0.001107	434.7798953065686	45.578	1.4443	46.473	45.883	47.327	0.89542					104	35	4	0	0	0	0.85277	1	4310	4310		25.45	1.2474	1	4040300	+		3237	22567	2104	2107	3740	3740					0.10388447425282266
AVLVLGKL	8	Unmodified	_AVLVLGKL_					0	0	0		ENST00000590152.1_1_19:9267386-9267698:+|nuORF	ENST00000590152.1_1_19:9267386-9267698:+|nuORF	ENST00000590152.1_1_19:9267386-9267698:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.785400390625	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.82464	1	1229	1229		21.702	0	1	1286900			3238	14252	2105	2108	3741	3741					0.1398105515053203
AVLVLLLLIWI	11	Unmodified	_AVLVLLLLIWI_					0	0	0			REV__ENSG00000198398|ENST00000354905|TMEM207	REV__ENSG00000198398|ENST00000354905|TMEM207	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3263549804688	2	633.43341	1264.85227	-0.96036	-0.00060832	-3.1985	-0.002026	-4.1589	-0.0026344	633.9306785651634	57.669	0.11459	58.063	57.967	58.081	0.39407					4	2	2	0	0	0	0.17959	1	5993	5993		11.511	1.8054	1	119840	+		3239	23323	2106	2109	3742	3742					0.23043507992383638
AVLVLLTPS	9	Unmodified	_AVLVLLTPS_					0	0	0			REV__ENST00000510890.1_1_5:102595280-102611616:+|nuORF	REV__ENST00000510890.1_1_5:102595280-102611616:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79180908203125	2	456.791861	911.569169	-1.3117	-0.00059915	2.7647	0.0012629	1.4531	0.00066375	456.79301301178594	40.135	1.4029	40.092	39.45	40.853	-0.043697					111	34	4	0	0	0	0.69914	1	2947	2947		40.573	7.057	1	1093900	+		3240	27966	2107	2110	3743	3743					0.10984716596760791
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7798156738281	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.76996	1	2777	2777		33.516	0	1	2581600			3241	645	2108	2111	3744	3744					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7796325683594	2	434.778754	867.542954	-1.8344	-0.00079754	4.3253	0.0018805	2.4909	0.001083	434.7805085345101	43.07	1.706	43.07	42.535	44.241	0					126	41	4	0	0	0	0.76402	1	3117	3117		35.201	0	1	2514600			3242	645	2108	2111	3745	3745					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	2	434.778754	867.542954	-0.10471	-4.5526E-05	3.4241	0.0014887	3.3194	0.0014432	434.7801797688748	34.455	0.9535	34.45	33.903	34.857	-0.0047417					93	22	5	0	0	0	0.76402	3	2056	2056;2086;2108		35.201	0	1	2846000			3243	645	2108	2111	3746;3747;3748	3746					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801208496094	2	434.778754	867.542954	-0.14252	-6.1964E-05	3.501	0.0015222	3.3585	0.0014602	434.78017454908985	35.066	1.262	35.054	34.849	36.111	-0.012203					110	29	4	0	0	0	0.76996	1	2206	2206		33.516	0	1	2804500			3244	645	2108	2111	3749	3749					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.69914	1	2337	2337		40.573	6.4001	1	3714500			3245	645	2108	2111	3750	3750					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78021240234375	2	434.778754	867.542954	0.048931	2.1274E-05	3.263	0.0014187	3.312	0.00144	434.780055906595	38.381	1.4097	38.353	37.994	39.403	-0.027843					122	32	4	0	0	0	0.67235	2	2617	2574;2617		42.474	7.2737	1	2404700			3246	645	2108	2111	3751;3752	3752					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7794494628906	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.67235	1	2990	2990		42.474	0	1	2938700			3247	645	2108	2111	3753	3753					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77972412109375	2	434.778754	867.542954	0.20501	8.9135E-05	2.1081	0.00091654	2.3131	0.0010057	434.77952396468385	43.343	2.099	43.316	42.291	44.39	-0.026768					151	50	4	0	0	0	0.76402	2	3264	3264;3300		35.201	0	1	2133200			3248	645	2108	2111	3754;3755	3754					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7796325683594	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.76996	2	3449	3449;3521		33.516	0	1	1294000			3249	645	2108	2111	3756;3757	3756					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77996826171875	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.67235	3	3719	3683;3719;3824		42.474	7.2737	1	2017500			3250	645	2108	2111	3758;3759;3760	3759					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77947998046875	2	434.778754	867.542954	0.023581	1.0252E-05	2.6379	0.0011469	2.6615	0.0011571	434.7797629333649	48.108	2.6391	48.098	47.574	50.213	-0.0093269					205	68	4	0	0	0	0.7932	1	4045	4045		26.796	0	1	2315200			3251	645	2108	2111	3761	3761					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78021240234375	2	434.778754	867.542954	-0.61894	-0.0002691	3.8256	0.0016633	3.2067	0.0013942	434.7803762451805	34.577	0.94073	34.521	33.912	34.853	-0.056381					81	20	5	0	0	0	0.7932	1	2221	2221		25.45	0	1	3842800			3252	645	2108	2111	3762	3762					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801208496094	2	434.778754	867.542954	-0.97237	-0.00042277	4.234	0.0018408	3.2616	0.0014181	434.7805193577322	37.104	1.6925	37.05	36.066	37.758	-0.053555					155	37	5	0	0	0	0.76402	2	2464	2407;2464		35.201	0	1	5510500			3253	645	2108	2111	3763;3764	3764					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.780029296875	2	434.778754	867.542954	-1.3516	-0.00058764	3.9223	0.0017053	2.5707	0.0011177	434.78034506978366	39.667	1.8641	39.623	39.121	40.985	-0.043697					176	46	5	0	0	0	0.76402	2	2894	2894;2930		35.201	0	1	3943300			3254	645	2108	2111	3765;3766	3765					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7795104980469	2	434.778754	867.542954	-1.1228	-0.00048815	3.4102	0.0014827	2.2874	0.00099453	434.7801032015678	43.351	2.0206	43.315	42.595	44.616	-0.035816					155	47	4	0	0	0	0.67235	3	3482	3365;3471;3482		42.474	0	1	2016300			3255	645	2108	2111	3767;3768;3769	3769					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7799072265625	2	434.778754	867.542954	-1.003	-0.00043608	3.6101	0.0015696	2.6071	0.0011335	434.7801973515074	45.237	1.8216	45.206	44.189	46.01	-0.031067					113	41	4	0	0	0	0.67235	3	3563	3563;3622;3634		42.474	0	1	1431800			3256	645	2108	2111	3770;3771;3772	3770					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77996826171875	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.76402	4	3825	3802;3825;3848;3917		35.201	0	1	2468400			3257	645	2108	2111	3773;3774;3775;3776	3774					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7800598144531	2	434.778754	867.542954	-0.81007	-0.0003522	3.4341	0.0014931	2.624	0.0011409	434.7801064754335	48.077	2.7534	48.052	47.541	50.295	-0.025112					179	68	4	0	0	0	0.76996	2	4098	4018;4098		33.516	0	1	1940000			3258	645	2108	2111	3777;3778	3778					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77685546875	2	434.778754	867.542954	-0.041698	-1.813E-05	2.7567	0.0011986	2.715	0.0011804	434.7799495779998	61.609	1.1389	61.576	61.414	62.553	-0.033173					78	49	2	0	0	0	0.7932	1	5822	5822		26.796	0	1	301770			3259	645	2108	2111	3779	3779					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801513671875	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.69914	5	2131	2072;2084;2131;2156;2166		40.573	7.057	1	3951300			3260	645	2108	2111	3780;3781;3782;3783;3784	3782					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801818847656	2	434.778754	867.542954	0.15311	6.6568E-05	3.0229	0.0013143	3.176	0.0013809	434.7799826029187	37.007	1.7817	37.018	36.075	37.857	0.011173					164	39	5	0	0	0	0.76402	1	2388	2388		35.201	0	1	5259900			3261	645	2108	2111	3785	3785					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.780029296875	2	434.778754	867.542954	-0.14051	-6.1091E-05	3.4383	0.0014949	3.2978	0.0014338	434.7801225093181	38.257	1.3722	38.268	37.812	39.184	0.011173					116	31	4	0	0	0	0.76402	2	2602	2602;2611		35.201	0	1	2138600			3262	645	2108	2111	3786;3787	3786					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801208496094	2	434.778754	867.542954	0.085891	3.7343E-05	2.526	0.0010983	2.6119	0.0011356	434.77973178522114	39.697	1.6335	39.706	39.141	40.774	0.0092812					137	39	4	0	0	0	0.76402	1	2814	2814		35.201	0	1	4100400			3263	645	2108	2111	3788	3788					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7793273925781	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.76402	2	3035	3035;3047		35.201	0	1	2766200			3264	645	2108	2111	3789;3790	3789					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7795104980469	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.76996	5	3378	3272;3368;3378;3466;3477		33.516	3.0119	1	2165200			3265	645	2108	2111	3791;3792;3793;3794;3795	3793					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77960205078125	2	434.778754	867.542954	1.0906	0.00047416	1.4824	0.00064451	2.573	0.0011187	434.77927379886756	45.133	1.9101	45.129	44.288	46.198	-0.0041618					129	44	4	0	0	0	0.76996	2	3511	3511;3608		33.516	3.674	1	1333000			3266	645	2108	2111	3796;3797	3796					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7799987792969	2	434.778754	867.542954	1.3776	0.00059897	1.1215	0.0004876	2.4991	0.0010866	434.7791184687597	46.776	1.6866	46.772	46.112	47.798	-0.0041618					148	47	4	0	0	0	0.76402	1	3847	3847		35.201	0	1	2109000			3267	645	2108	2111	3798	3798					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7796936035156	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.76402	3	3994	3994;4018;4077		35.201	1.4512	1	1803700			3268	645	2108	2111	3799;3800;3801	3799					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7803649902344	2	434.778754	867.542954	1.0771	0.00046829	1.5251	0.00066307	2.6021	0.0011314	434.77937950289305	55.096	1.7211	55.123	54.502	56.224	0.027138					70	48	2	0	0	0	0.7932	1	4927	4927		19.36	0	1	299790			3269	645	2108	2111	3802	3802					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.78167724609375	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.095	1	66.122	65.622	66.622	0.027321								0	0	0	0.29299	1	6253	6253		33.516	0	1				3270	645	2108	2111	3803	3803					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7796630859375	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.76996	3	2744	2721;2744;2891		33.516	5.1588	1	2524800			3271	645	2108	2111	3804;3805;3806	3805					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7798156738281	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.76402	2	3175	3175;3200		35.201	0	1	1177900			3272	645	2108	2111	3807;3808	3807					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77972412109375	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.67235	5	3380	3372;3380;3389;3459;3513		42.474	7.2737	1	2364100			3273	645	2108	2111	3809;3810;3811;3812;3813	3810					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.779296875	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.7932	1	3596	3596		26.796	0	1	1959200			3274	645	2108	2111	3814	3814					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.12745	5.5413E-05	3.4254	0.0014893	3.5528	0.0015447	434.7800727481765	33.235	0.77096	33.345	33.052	33.823	0.10991					78	32	3	0	0	0	0.7932	1	1598	1598		25.45	0	1	320750			3275	645	2108	2111	3815	3815					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.13638	5.9295E-05	3.2501	0.0014131	3.3864	0.0014724	434.7800361226264	34.243	0.88012	34.352	33.821	34.701	0.10829					118	39	4	0	0	0	0.7932	1	1701	1701		18.324	0	1	2838300			3276	645	2108	2111	3816	3816					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.76996	1	1819	1819		33.516	0	1	2251100			3277	645	2108	2111	3817	3817					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78009033203125	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.5393	3	1986	1986;1994;2010		50.025	14.824	1	4737100			3278	645	2108	2111	3818;3819;3820	3818					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801818847656	2	434.778754	867.542954	0.17139	7.4517E-05	3.201	0.0013917	3.3724	0.0014663	434.7800235008866	37.854	1.477	37.948	37.639	39.116	0.094318					162	48	4	0	0	0	0.67235	5	2202	2182;2192;2202;2212;2262		42.474	7.2737	1	2203700			3279	645	2108	2111	3821;3822;3823;3824;3825	3823					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.18498	8.0427E-05	2.9584	0.0012863	3.1434	0.0013667	434.7799222967292	39.501	1.6389	39.589	38.953	40.592	0.088375					151	45	4	0	0	0	0.64338	2	2409	2409;2500		44.531	0	1	4736600			3280	645	2108	2111	3826;3827	3826					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7798767089844	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.7932	1	2720	2720		19.36	0	1	2513700			3281	645	2108	2111	3828	3828					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77972412109375	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.76402	2	3385	3385;3407		35.201	0	1	2750200			3282	645	2108	2111	3829;3830	3829					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7787170410156	2	434.778754	867.542954	0.3261	0.00014178	2.4294	0.0010563	2.7555	0.0011981	434.77975339221	54.99	1.8925	55.081	54.473	56.365	0.091167					101	62	2	0	0	0	0.7932	1	4502	4502		13.775	0	1	456330			3283	645	2108	2111	3831	3831					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7802734375	2	434.778754	867.542954	0.083396	3.6259E-05	3.2514	0.0014137	3.3348	0.0014499	434.78005466270537	34.317	1.0002	34.271	33.763	34.763	-0.045815					125	41	4	0	0	0	0.7932	1	1765	1765		25.45	4.9683	1	3033400			3284	645	2108	2111	3832	3832					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.76402	2	1802	1802;1833		35.201	0	1	2158200			3285	645	2108	2111	3833;3834	3833					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7802429199219	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.77546	2	2076	2076;2167		31.955	1.4512	1	4750000			3286	645	2108	2111	3835;3836	3835					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78009033203125	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.76996	1	2201	2201		33.516	0	1	2486400			3287	645	2108	2111	3837	3837					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801513671875	2	434.778754	867.542954	-0.10818	-4.7034E-05	3.1846	0.0013846	3.0765	0.0013376	434.7800213108271	39.594	1.7303	39.546	38.941	40.672	-0.04789					162	53	5	0	0	0	0.76402	2	2408	2408;2465		35.201	0	1	5065300			3288	645	2108	2111	3838;3839	3838					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7798156738281	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.76402	2	2774	2726;2774		35.201	0	1	2793300			3289	645	2108	2111	3840;3841	3841					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7796630859375	2	434.778754	867.542954	-0.23402	-0.00010175	2.835	0.0012326	2.601	0.0011308	434.77987896985167	43.157	1.7547	43.107	42.38	44.135	-0.050308					136	44	4	0	0	0	0.69914	5	3064	2884;2937;2948;2984;3064		40.573	3.7478	1	2479900			3290	645	2108	2111	3842;3843;3844;3845;3846	3846					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801208496094	2	434.778754	867.542954	-0.29603	-0.00012871	3.1388	0.0013647	2.8428	0.001236	434.77998100939635	44.91	1.6932	44.842	44.077	45.77	-0.068634					139	41	4	0	0	0	0.67235	2	3236	3212;3236		42.474	0	1	1190800			3291	645	2108	2111	3847;3848	3848					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77947998046875	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.76402	3	3524	3362;3498;3524		35.201	0	1	2833200			3292	645	2108	2111	3849;3850;3851	3851					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7803039550781	2	434.778754	867.542954	-0.61408	-0.00026699	3.3286	0.0014472	2.7146	0.0011802	434.78015323105376	52.924	3.3917	52.849	52.471	55.862	-0.074512					147	100	2	0	0	0	0.7932	4	4298	4298;4329;4453;4476		26.796	0	1	526750			3293	645	2108	2111	3852;3853;3854;3855	3852					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7791442871094	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.383	1	66.429	65.929	66.929	0.045113								0	0	0	0.33301	1	5880	5880		19.36	0	1				3294	645	2108	2111	3856	3856					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7802429199219	2	434.778754	867.542954	0.35961	0.00015635	3.3799	0.0014695	3.7395	0.0016259	434.78011136196255	36.165	2.4395	36.447	35.432	37.871	0.28173					211	60	5	0	0	0	0.69914	1	2985	2985		40.573	0	1	8602100			3295	645	2108	2111	3857	3857					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7803955078125	2	434.778754	867.542954	-0.30995	-0.00013476	4.1464	0.0018027	3.8364	0.001668	434.78044491218617	37.836	1.2567	38.149	37.864	39.121	0.31312					114	31	4	0	0	0	0.76402	1	3109	3109		35.201	0	1	8178800			3296	645	2108	2111	3858	3858					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7798156738281	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.7932	2	3209	3209;3519		25.45	0	1	17256000			3297	645	2108	2111	3859;3860	3859					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7796630859375	2	434.778754	867.542954	-0.7455	-0.00032413	3.1434	0.0013667	2.3979	0.0010426	434.7799642778913	44.364	1.5041	44.814	44.322	45.826	0.45025					111	36	4	0	0	0	0.7932	1	4144	4144		26.796	0	1	4473900			3298	645	2108	2111	3861	3861					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	434.778754	867.542954	1.5094	0.00065624	1.8704	0.00081321	3.3798	0.0014694	434.7794635539601	36.504	1.1186	36.944	36.745	37.863	0.44043					77	26	3	0	0	0	0.76996	1	3005	3005		33.516	0	1	5607300			3299	645	2108	2111	3862	3862					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801818847656	2	434.778754	867.542954	0.24981	0.00010861	3.5134	0.0015276	3.7632	0.0016362	434.78017285768743	37.739	1.2173	38.259	37.943	39.16	0.51989					114	30	4	0	0	0	0.76402	2	3049	3049;3061		35.201	0	1	8689200			3300	645	2108	2111	3863;3864	3863					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7789306640625	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.76996	1	3752	3752		33.516	0	1	6824500			3301	645	2108	2111	3865	3865					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77484130859375	2	434.778754	867.542954	-1.4872	-0.00064659	2.9694	0.001291	1.4823	0.00064445	434.7799081673859	43.398	0.96524	44.172	43.498	44.463	0.7738					64	23	3	0	0	0	0.76996	1	3939	3939		33.516	0	1	2227600			3302	645	2108	2111	3866	3866					0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.9277	-0.00083814	5.2869	0.0022986	3.3592	0.0014605	434.7809483599131	37.001	1.6402	37.001	35.921	37.561	0	-0.015336	0.0013541	NaN	50.025	142	38	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4420100			3303	645	2108	2111							0.10388447425305003
AVLVSLLGP	9	Unmodified	_AVLVSLLGP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.778754	867.542954	-1.6484	-0.0007167	5.0134	0.0021797	3.365	0.001463	434.7808256728397	37.033	1.8448	37.057	36.022	37.867	0.023621	0.040038	0.0011162	NaN	50.025	180	50	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4310800			3304	645	2108	2111							0.10388447425305003
AVMVCTGF	8	Unmodified	_AVMVCTGF_					0	0	0		ENSG00000010932|ENST00000617670|FMO1;nc|ENSG00000010932|Q01740-2|FMO1;ENST00000469112.5_2_1:171244541-171251486:+|nuORF	ENSG00000010932|ENST00000617670|FMO1	ENSG00000010932|ENST00000617670|FMO1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.1943664550781	2	414.193142	826.371732	-1.5826	-0.00065552	-0.29253	-0.00012116	-1.8752	-0.00077668	414.19293787691356	78.674	0.76385	78.768	78.447	79.21	0.0942					30	22	2	0	0	0	0.4196	1	7436	7436		35.201	6.9464	1	121100			3305	775	2109	2112	3867	3867					-0.04839949209201677
AVNAHSNILK	10	Unmodified	_AVNAHSNILK_					0	0	0		nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-4|IMMT;ENSG00000132305|ENST00000410111|IMMT;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF	nc|ENSG00000132305|Q16891-3|IMMT	nc|ENSG00000132305|Q16891-3|IMMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.803466796875	2	533.803823	1065.59309	-0.28826	-0.00015387	0.049615	2.6485E-05	-0.23864	-0.00012739	533.8037365554084	27.478	0.99946	27.303	27.016	28.015	-0.17559					58	22	4	0	0	0	0.025248	5	1606	1573;1582;1594;1606;1622		117.81	35.571	1	1600700			3306	3778	2110	2113	3868;3869;3870;3871;3872	3871					0.06291950083118536
AVNAHSNILK	10	Unmodified	_AVNAHSNILK_					0	0	0		nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-4|IMMT;ENSG00000132305|ENST00000410111|IMMT;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF	nc|ENSG00000132305|Q16891-3|IMMT	nc|ENSG00000132305|Q16891-3|IMMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.8036499023438	2	533.803823	1065.59309	1.1771	0.00062834	-1.3486	-0.0007199	-0.17152	-9.1556E-05	533.8029863469801	27.515	0.90827	27.261	26.945	27.853	-0.25465					57	20	4	0	0	0	0.025779	4	1613	1589;1602;1613;1625		117.53	34.775	1	1619800			3307	3778	2110	2113	3873;3874;3875;3876	3875					0.06291950083118536
AVNALPLL	8	Unmodified	_AVNALPLL_					0	0	0			REV__ENST00000491144.5_1_3:183853173-183855624:+|nuORF	REV__ENST00000491144.5_1_3:183853173-183855624:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.7579650878906	2	405.757821	809.501089	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.123	1	66.249	65.749	66.749	0.12649								0	0	0	0.30004	1	5869	5869		21.702	0	1		+		3308	19928	2111	2114	3877	3877					0.08871891736771431
AVNVAVLLL	9	Unmodified	_AVNVAVLLL_					0	0	0		ENSG00000099203|ENST00000214869|TMED1	ENSG00000099203|ENST00000214869|TMED1	ENSG00000099203|ENST00000214869|TMED1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3010559082031	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.76996	1	2105	2105		33.516	1.5607	1	1715600			3309	1747	2112	2115	3878	3878					0.1262842283365444
AVPLHQRH	8	Unmodified	_AVPLHQRH_					0	0	0		ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27392578125	2	479.272493	956.530432	2.0858	0.00099966	-1.2282	-0.00058867	0.85754	0.000411	479.2717566012235	97.527	1.0344	97.913	97.598	98.632	0.38548					64	24	4	0	0	0	0.92176	1	11711	11711		46.766	0	1	1495600			3310	10397	2113	2116	3879	3879					0.05042848805601352
AVPLHQRH	8	Unmodified	_AVPLHQRH_					0	0	0		ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27294921875	2	479.272493	956.530432	2.2912	0.0010981	-1.8257	-0.00087499	0.46557	0.00022314	479.2714500709969	101.78	0.95604	102.04	101.69	102.65	0.26322					54	23	3	0	0	0	0.92176	2	12345	12345;12357		46.766	2.3892	1	2783100			3311	10397	2113	2116	3880;3881	3880					0.05042848805601352
AVPLHQRH	8	Unmodified	_AVPLHQRH_					0	0	0		ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2730407714844	2	479.272493	956.530432	1.8674	0.00089498	-1.3746	-0.0006588	0.49279	0.00023618	479.2716678975305	101.7	1.185	102.03	101.74	102.92	0.32511					59	27	4	0	0	0	0.52826	2	12408	12396;12408		74.517	17.064	1	2945200			3312	10397	2113	2116	3882;3883	3883					0.05042848805601352
AVPLHQRH	8	Unmodified	_AVPLHQRH_					0	0	0		ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	479.272493	956.530432	-0.80356	-0.00038512	1.797	0.00086124	0.99342	0.00047612	479.2732909838055	101.84	0.50735	102.03	101.67	102.18	0.19484	0.0030448	0.0022706	NaN	74.517	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	212080			3313	10397	2113	2116							0.05042848805601352
AVPLHQRH	8	Unmodified	_AVPLHQRH_					0	0	0		ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	479.272493	956.530432	0.78233	0.00037495	-0.13596	-6.5161E-05	0.64637	0.00030979	479.2723679727606	101.85	0.4958	101.99	101.8	102.3	0.13523	-0.040598	0.00041783	NaN	74.517	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211240			3314	10397	2113	2116							0.05042848805601352
AVPLHQRH	8	Unmodified	_AVPLHQRH_					0	0	0		ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	ENST00000357869.7_2_12:49171906-49176363:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	479.272493	956.530432	-1.6824	-0.00080635	2.706	0.0012969	1.0236	0.00049058	479.2736927101352	101.92	0.54419	102.05	101.75	102.3	0.13569	0.023169	0.003142	NaN	74.517	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	194610			3315	10397	2113	2116							0.05042848805601352
AVPLLATES	9	Unmodified	_AVPLLATES_					0	0	0		nc|ENSG00000152291|O43493-6|TGOLN2;nc|ENSG00000152291|O43493-4|TGOLN2;ENSG00000152291|ENST00000377386|TGOLN2;nc|ENSG00000152291|O43493-5|TGOLN2;nc|ENSG00000152291|O43493-3|TGOLN2;nc|ENSG00000152291|O43493-7|TGOLN2	nc|ENSG00000152291|O43493-6|TGOLN2	nc|ENSG00000152291|O43493-6|TGOLN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.75469970703125	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.7932	1	8036	8036		24.203	0	1	394230			3316	5167	2114	2117	3884	3884					0.042629628033296285
AVPSSPRRA	9	Unmodified	_AVPSSPRRA_					0	0	0		ENST00000528813.1_1_11:56099435-56099735:-|nuORF	ENST00000528813.1_1_11:56099435-56099735:-|nuORF	ENST00000528813.1_1_11:56099435-56099735:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7692565917969	2	470.769783	939.525013	-0.93673	-0.00044098	-0.76345	-0.00035941	-1.7002	-0.00080039	470.7692759714824	53.261	1.827	53.278	52.753	54.58	0.017487					126	54	3	0	0	0	0.76255	1	4771	4771		35.618	5.1146	1	1396300			3317	13313	2115	2118	3885	3885					0.052831252231385406
AVPTLLYS	8	Unmodified	_AVPTLLYS_					0	0	0			REV__ENST00000316846.2_11:65545618-65547282:-|nuORF	REV__ENST00000316846.2_11:65545618-65547282:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.2464599609375	2	432.247286	862.48002	-1.0325	-0.00044629	0.17629	7.6202E-05	-0.8562	-0.00037009	432.2475175582521	98.287	1.1701	98.287	97.806	98.976	0					69	28	4	0	0	0	0.884	1	9901	9901		33.516	5.2613	1	659880	+		3318	23891	2116	2119	3886	3886					0.043278816372207984
AVPTLLYS	8	Unmodified	_AVPTLLYS_					0	0	0			REV__ENST00000316846.2_11:65545618-65547282:-|nuORF	REV__ENST00000316846.2_11:65545618-65547282:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2467041015625	2	432.247286	862.48002	1.4323	0.0006191	-2.1406	-0.00092526	-0.70829	-0.00030616	432.2464138290426	97.895	1.475	98.281	97.765	99.24	0.38548					115	35	5	0	0	0	0.91005	3	11832	11759;11832;11845		52.299	7.7681	1	6652700	+		3319	23891	2116	2119	3887;3888;3889	3888					0.043278816372207984
AVPTLLYS	8	Unmodified	_AVPTLLYS_					0	0	0			REV__ENST00000316846.2_11:65545618-65547282:-|nuORF	REV__ENST00000316846.2_11:65545618-65547282:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.24664306640625	2	432.247286	862.48002	1.6286	0.00070397	-2.2133	-0.00095671	-0.58472	-0.00025274	432.24636827465696	97.973	1.4306	98.35	97.873	99.304	0.37679					103	34	5	0	0	0	0.79972	2	11895	11882;11895		62.978	16.212	1	6519900	+		3320	23891	2116	2119	3890;3891	3891					0.043278816372207984
AVPVRSIQS	9	Unmodified	_AVPVRSIQS_					0	0	0			REV__ENSG00000150394|ENST00000577390|CDH8	REV__ENSG00000150394|ENST00000577390|CDH8	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.7789306640625	2	478.779816	955.545079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.642	1	70.642	70.142	71.142	0								0	0	0	0.36422	1	6294	6294		49.536	8.1094	1		+		3321	20208	2117	2120	3892	3892					0.0655287616308442
AVQAARRRPRE	11	Unmodified	_AVQAARRRPRE_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2554931640625	3	437.256843	1308.7487	-1.0127	-0.0004428	2.1448	0.00093782	1.1321	0.00049502	437.25769841228777	99.435	2.9287	99.435	98.234	101.16	0					165	70	3	0	0	0	0.74771	1	10003	10003		22.562	4.7284	1	385900	+		3322	18092	2118	2121	3893	3893					0.10667413657256475
AVQRKKNQVK	10	Unmodified	_AVQRKKNQVK_					0	0	0			REV__ENSG00000113211|ENST00000231136|PCDHB6	REV__ENSG00000113211|ENST00000231136|PCDHB6	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.25201416015625	3	400.250806	1197.73059	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.961	1	66.006	65.506	66.506	0.045113								0	0	0	0.45132	1	5851	5851		21.686	2.0588	1		+		3323	17982	2119	2122	3894	3894					0.13963278682558666
AVQVRDKWLGE	11	Unmodified	_AVQVRDKWLGE_					0	0	0			REV__ENSG00000101213|ENST00000542869|PTK6	REV__ENSG00000101213|ENST00000542869|PTK6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7804260253906	3	434.238455	1299.69353	0.92732	0.00040268	-0.55965	-0.00024302	0.36767	0.00015966	434.23787286756243	67.632	0.36658	67.662	67.353	67.72	0.030571					14	11	2	0	0	0	0.1745	1	6433	6433		23.378	13.732	1	31675	+		3324	17256	2120	2123	3895	3895					0.055675623461411305
AVRAAKAVN	9	Unmodified	_AVRAAKAVN_					0	0	0		ENSG00000078070|ENST00000265594|MCCC1;ENST00000495767.5_1_3:182740340-182790239:-|nuORF	ENSG00000078070|ENST00000265594|MCCC1	ENSG00000078070|ENST00000265594|MCCC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.27435302734375	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.78536	1	9386	9386		29.15	0	1	41438000			3325	1390	2121	2124	3896	3896					0.08152313228504227
AVRATLPVF	9	Unmodified	_AVRATLPVF_					0	0	0		ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-4|BCAT1;ENSG00000060982|ENST00000261192|BCAT1;nc|ENSG00000060982|P54687-5|BCAT1	ENST00000544418.1_1_12:24987681-25055019:-|nuORF	ENST00000544418.1_1_12:24987681-25055019:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.29278564453125	2	487.295102	972.575651	-0.95486	-0.0004653	-3.015	-0.0014692	-3.9698	-0.0019345	487.2935206291715	91.355	2.0771	91.355	90.861	92.938	0					114	48	4	0	0	0	0.72402	1	8906	8906		38.806	6.8513	1	1437600			3326	1071	2122	2125	3897	3897					0.08826654548136048
AVRDLDNLYY	10	Unmodified	_AVRDLDNLYY_					0	0	0			REV__ENSG00000156052|ENST00000286548|GNAQ	REV__ENSG00000156052|ENST00000286548|GNAQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3140869140625	2	621.311677	1240.6088	-0.62332	-0.00038727	4.0504	0.0025166	3.4271	0.0021293	621.3140085474115	68.614	0.80863	68.647	68.364	69.173	0.033005					72	32	3	0	0	0	0.70553	1	6556	6556		44.377	1.981	1	488350	+		3327	20466	2123	2126	3898	3898					-0.0018780819048060948
AVRDLLPVWL	10	Unmodified	_AVRDLLPVWL_					0	0	0		ENSG00000156381|ENST00000286918|ANKRD9	ENSG00000156381|ENST00000286918|ANKRD9	ENSG00000156381|ENST00000286918|ANKRD9	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.3663330078125	2	591.355691	1180.69683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.5	1	107.6	107.1	108.1	0.10396								0	0	0	0.45132	1	13114	13114		20.947	0.95016	1				3328	5375	2124	2127	3899	3899					0.11370857190809147
AVRFGLGR	8	Unmodified	_AVRFGLGR_					0	0	0			REV__ENST00000504821.1_1_5:175813909-175815568:-|nuORF	REV__ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2633361816406	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.87064	1	2800	2800		29.15	3.6994	1	22924000	+		3329	27868	2125	2128	3900	3900					0.07144347919665961
AVRFGLGR	8	Unmodified	_AVRFGLGR_					0	0	0			REV__ENST00000504821.1_1_5:175813909-175815568:-|nuORF	REV__ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.262939453125	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.84341	1	2811	2811		24.203	2.5004	1	22029000	+		3330	27868	2125	2128	3901	3901					0.07144347919665961
AVRFGLGR	8	Unmodified	_AVRFGLGR_					0	0	0			REV__ENST00000504821.1_1_5:175813909-175815568:-|nuORF	REV__ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2628173828125	2	438.264136	874.51372	-2.4769	-0.0010856	-1.2978	-0.00056879	-3.7748	-0.0016543	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.90465	1	3613	3613		40.573	1.3198	1	246320000	+		3331	27868	2125	2128	3902	3902					0.07144347919665961
AVRFGLGR	8	Unmodified	_AVRFGLGR_					0	0	0			REV__ENST00000504821.1_1_5:175813909-175815568:-|nuORF	REV__ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2636413574219	2	438.264136	874.51372	1.5783	0.00069171	-3.9402	-0.0017268	-2.3619	-0.0010351	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.92457	1	2605	2605		47.916	5.4411	1	92475000	+		3332	27868	2125	2128	3903	3903					0.07144347919665961
AVRFGLGR	8	Unmodified	_AVRFGLGR_					0	0	0			REV__ENST00000504821.1_1_5:175813909-175815568:-|nuORF	REV__ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	438.264136	874.51372	0.067362	2.9522E-05	1.3047	0.0005718	1.3721	0.00060132	438.2635260260304	35.141	0.1153	35.085	35.031	35.146	-0.055149	-0.053087	0.0040762	NaN	47.916	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35086	+		3333	27868	2125	2128							0.07144347919665961
AVRGEQRRRLL	11	Unmodified	_AVRGEQRRRLL_					0	0	0		ENST00000379937.6_3_14:105695225-105767012:-|nuORF;ENST00000548421.2_1_14:105722813-105767174:-|nuORF	ENST00000379937.6_3_14:105695225-105767012:-|nuORF	ENST00000379937.6_3_14:105695225-105767012:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9430847167969	3	451.944376	1352.8113	-0.066969	-3.0266E-05	-2.5026	-0.001131	-2.5695	-0.0011613	451.9431207678107	53.546	2.822	53.541	51.391	54.213	-0.0053711					204	73	4	0	0	0	0.77205	1	4581	4581		17.167	0	1	724120			3334	10904	2126	2129	3904	3904					0.14900559725469975
AVRGTKSN	8	Unmodified	_AVRGTKSN_					0	0	0			REV__ENSG00000110042|ENST00000227451|DTX4	REV__ENSG00000110042|ENST00000227451|DTX4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.228271484375	2	416.735409	831.456264	0.86947	0.00036234	2.7515	0.0011466	3.6209	0.001509	416.73647540770315	50.286	1.8103	50.734	49.569	51.38	0.44761					56	43	2	0	0	0	0.4196	1	4920	4920		20.947	0	1	496660	+		3335	17788	2127	2130	3905	3905					0.0337946092341781
AVRKRGRGY	9	Unmodified	_AVRKRGRGY_					0	0	0			REV__ENST00000336180.6_1_7:73498316-73500123:+|nuORF	REV__ENST00000336180.6_1_7:73498316-73500123:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.817599	1061.62064	-0.033042	-1.7573E-05	-1.3513	-0.00071863	-1.3843	-0.0007362	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.69914	1	9131	9131		40.573	7.7602	1	4208000	+		3336	25181	2128	2131	3906	3906					0.09229898134049108
AVRKRGRGY	9	Unmodified	_AVRKRGRGY_					0	0	0			REV__ENST00000336180.6_1_7:73498316-73500123:+|nuORF	REV__ENST00000336180.6_1_7:73498316-73500123:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8165893554688	2	531.817599	1061.62064	-1.4587	-0.00077575	0.042507	2.2606E-05	-1.4162	-0.00075314	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.77546	1	8470	8470		31.955	0.42505	1	1159800	+		3337	25181	2128	2131	3907	3907					0.09229898134049108
AVRNHPEL	8	Unmodified	_AVRNHPEL_					0	0	0		ENSG00000215912|ENST00000401095|TTC34	ENSG00000215912|ENST00000401095|TTC34	ENSG00000215912|ENST00000401095|TTC34	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.25714111328125	2	468.256508	934.498464	-1.1861	-0.00055538	-2.7398	-0.0012829	-3.9258	-0.0018383	468.2551087994404	82.125	3.0486	82.125	81.258	84.307	0					145	81	2	0	0	0	0.87479	1	7724	7724		30.504	2.2494	1	128510			3338	8657	2129	2132	3908	3908					0.0285943633180068
AVRNHPEL	8	Unmodified	_AVRNHPEL_					0	0	0		ENSG00000215912|ENST00000401095|TTC34	ENSG00000215912|ENST00000401095|TTC34	ENSG00000215912|ENST00000401095|TTC34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2563781738281	2	468.256508	934.498464	-0.11516	-5.3922E-05	-3.5335	-0.0016546	-3.6487	-0.0017085	468.25473552954975	82.299	3.2758	82.365	81.1	84.376	0.06591					140	75	2	0	0	0	0.89962	1	8084	8084		38.806	1.647	1	190410			3339	8657	2129	2132	3909	3909					0.0285943633180068
AVRNHPEL	8	Unmodified	_AVRNHPEL_					0	0	0		ENSG00000215912|ENST00000401095|TTC34	ENSG00000215912|ENST00000401095|TTC34	ENSG00000215912|ENST00000401095|TTC34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2550964355469	2	468.256508	934.498464	0.51599	0.00024162	-4.0923	-0.0019162	-3.5763	-0.0016746	468.25439307684206	81.814	3.5851	81.751	80.618	84.204	-0.062943					157	83	2	0	0	0	0.89962	2	8274	8274;8316		55.504	10.973	1	180670			3340	8657	2129	2132	3910;3911	3910					0.0285943633180068
AVRPALPSS	9	Unmodified	_AVRPALPSS_					0	0	0		nc|ENSG00000065600|Q9H813-2|PACC1	nc|ENSG00000065600|Q9H813-2|PACC1	nc|ENSG00000065600|Q9H813-2|PACC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2602844238281	2	449.261259	896.507966	-0.43537	-0.0001956	-1.0183	-0.0004575	-1.4537	-0.00065309	449.26067669224085	66.168	1.0089	66.554	66.153	67.162	0.38581					54	26	3	0	0	0	0.7932	1	7217	7217		24.203	1.1603	1	1011600			3341	14765	2130	2133	3912	3912					0.055572046173210765
AVRPNSKIKVK	11	Unmodified	_AVRPNSKIKVK_					0	0	0		ENSG00000010072|ENST00000295050|SPRTN	ENSG00000010072|ENST00000295050|SPRTN	ENSG00000010072|ENST00000295050|SPRTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.9329528808594	3	413.934706	1238.78229	-0.38357	-0.00015877	-4.3232	-0.0017895	-4.7068	-0.0019483	413.9328988978551	44.689	3.4482	44.631	43.515	46.963	-0.058262					186	88	3	0	0	0	0.76892	1	3254	3254		17.833	2.4957	1	587780			3342	761	2131	2134	3913	3913					0.1724502237645993
AVRQDLYC	8	Unmodified	_AVRQDLYC_					0	0	0		ENSG00000182308|ENST00000333141|DCAF4L1	ENSG00000182308|ENST00000333141|DCAF4L1	ENSG00000182308|ENST00000333141|DCAF4L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.23590087890625	2	484.236927	966.459301	-0.090856	-4.3996E-05	-1.4767	-0.00071509	-1.5676	-0.00075909	484.2361457331885	85.202	0.6129	85.269	84.853	85.466	0.067261					42	13	4	0	0	0	0.89962	1	8520	8520		38.806	0	1	1388800			3343	7445	2132	2135	3914	3914					-0.025270320140862168
AVRQDLYC	8	Unmodified	_AVRQDLYC_					0	0	0		ENSG00000182308|ENST00000333141|DCAF4L1	ENSG00000182308|ENST00000333141|DCAF4L1	ENSG00000182308|ENST00000333141|DCAF4L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.236328125	2	484.236927	966.459301	-0.75569	-0.00036593	-1.3204	-0.00063937	-2.076	-0.0010053	484.236466994467	87.234	1.2703	87.435	87.155	88.425	0.20105					73	29	4	0	0	0	0.47906	1	8598	8598		76.847	26.822	1	1269300			3344	7445	2132	2135	3915	3915					-0.025270320140862168
AVRQDLYC	8	Unmodified	_AVRQDLYC_					0	0	0		ENSG00000182308|ENST00000333141|DCAF4L1	ENSG00000182308|ENST00000333141|DCAF4L1	ENSG00000182308|ENST00000333141|DCAF4L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.2361145019531	2	484.236927	966.459301	0.66686	0.00032292	-2.1647	-0.0010482	-1.4978	-0.00072529	484.23582109862673	87.322	1.153	87.471	87.251	88.404	0.14956					65	26	4	0	0	0	0.9295	1	8624	8624		55.504	7.5886	1	1122200			3345	7445	2132	2135	3916	3916					-0.025270320140862168
AVRQDLYC	8	Unmodified	_AVRQDLYC_					0	0	0		ENSG00000182308|ENST00000333141|DCAF4L1	ENSG00000182308|ENST00000333141|DCAF4L1	ENSG00000182308|ENST00000333141|DCAF4L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.23614501953125	2	484.236927	966.459301	0.39551	0.00019152	-2.3516	-0.0011387	-1.9561	-0.00094721	484.23583864352696	86.77	1.4541	87.217	86.978	88.432	0.44629					87	34	4	0	0	0	0.73851	1	10215	10215		65.803	10.299	1	8816400			3346	7445	2132	2135	3917	3917					-0.025270320140862168
AVRQDLYC	8	Unmodified	_AVRQDLYC_					0	0	0		ENSG00000182308|ENST00000333141|DCAF4L1	ENSG00000182308|ENST00000333141|DCAF4L1	ENSG00000182308|ENST00000333141|DCAF4L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.236083984375	2	484.236927	966.459301	-1.0641	-0.00051528	-0.85776	-0.00041536	-1.9219	-0.00093064	484.2366198797029	86.871	1.6056	87.325	87.019	88.625	0.45429					96	38	4	0	0	0	0.89494	1	10274	10274		37.159	5.2042	1	9271700			3347	7445	2132	2135	3918	3918					-0.025270320140862168
AVRRARTRFL	10	Unmodified	_AVRRARTRFL_					0	0	0			REV__ENST00000525599.1_1_1:46088625-46089102:-|nuORF	REV__ENST00000525599.1_1_1:46088625-46089102:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.3888549804688	2	623.38618	1244.75781	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.17	1	119.26	118.76	119.76	0.087753								0	0	0	0.45132	1	12547	12547		18.262	1.5447	1		+		3348	20667	2133	2136	3919	3919					0.14521807013602483
AVRRERRQLL	10	Unmodified	_AVRRERRQLL_					0	0	0		ENST00000245046.6_1_3:10004387-10004693:-|nuORF	ENST00000245046.6_1_3:10004387-10004693:-|nuORF	ENST00000245046.6_1_3:10004387-10004693:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7528991699219	3	432.937221	1295.78984	-0.88271	-0.00038216	2.3661	0.0010244	1.4834	0.00064223	433.27308513686484	61.962	0.22026	62.351	62.184	62.404	0.38846					6	4	2	0	0	0	0.37624	1	6598	6598		21.686	5.7651	1	22357			3349	9266	2134	2137	3920	3920					0.15377174696754992
AVRSLRDP	8	Unmodified	_AVRSLRDP_					0	0	0			REV__ENSG00000140323|ENST00000267889|DISP2	REV__ENSG00000140323|ENST00000267889|DISP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26373291015625	2	457.264333	912.514114	-0.13162	-6.0186E-05	0.19173	8.7669E-05	0.060104	2.7483E-05	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.89962	1	7726	7726		38.806	1.647	1	1194000	+		3350	19606	2135	2138	3921	3921					0.05435722848858404
AVRSMKRKAS	10	Unmodified	_AVRSMKRKAS_					0	0	0		ENST00000245441.9_2_14:51243851-51259488:-|nuORF	ENST00000245441.9_2_14:51243851-51259488:-|nuORF	ENST00000245441.9_2_14:51243851-51259488:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3303833007812	2	567.332224	1132.6499	-0.54401	-0.00030863	-3.2405	-0.0018384	-3.7845	-0.002147	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.86106	1	8678	8678		33.922	6.0394	1	4477200			3351	9268	2136	2139	3922	3922					0.08887674368020271
AVRSMKRKAS	10	Unmodified	_AVRSMKRKAS_					0	0	0		ENST00000245441.9_2_14:51243851-51259488:-|nuORF	ENST00000245441.9_2_14:51243851-51259488:-|nuORF	ENST00000245441.9_2_14:51243851-51259488:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.329345703125	2	567.332224	1132.6499	-0.468	-0.00026551	-3.4974	-0.0019842	-3.9654	-0.0022497	567.330130226139	95.712	2.0668	95.712	95.357	97.424	0					107	47	3	0	0	0	0.86106	1	9531	9531		33.922	3.6039	1	608220			3352	9268	2136	2139	3923	3923					0.08887674368020271
AVRSPAASDRV	11	Unmodified	_AVRSPAASDRV_					0	0	0			REV__ENST00000530167.1_1_11:118965174-118965585:-|nuORF	REV__ENST00000530167.1_1_11:118965174-118965585:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	564.8101806640625	2	564.809636	1127.60472	-1.2607	-0.00071205	2.862	0.0016165	1.6014	0.00090446	564.8111502403638	109.93	1.6377	109.87	109.63	111.26	-0.055077					173	65	5	0	0	0	0.69248	1	11995	11995		32.751	2.4328	1	6827300	+		3353	28279	2137	2140	3924	3924					0.04602147106447774
AVRSPAASDRV	11	Unmodified	_AVRSPAASDRV_					0	0	0			REV__ENST00000530167.1_1_11:118965174-118965585:-|nuORF	REV__ENST00000530167.1_1_11:118965174-118965585:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.8096923828125	2	564.809636	1127.60472	3.0107	0.0017004	-1.5824	-0.00089378	1.4282	0.00080667	564.8086416193407	110	1.6919	109.97	109.64	111.33	-0.027641					152	59	3	0	0	0	0.72106	1	12171	12171		28.081	0	1	4099500	+		3354	28279	2137	2140	3925	3925					0.04602147106447774
AVRTPSRAS	9	Unmodified	_AVRTPSRAS_					0	0	0			REV__L1M2_dup9102|chr21:15781465-15783675:+|2.176233979814302|0.1805436335784144|3.59|63.0|47|3|sense	REV__L1M2_dup9102|chr21:15781465-15783675:+|2.176233979814302|0.1805436335784144|3.59|63.0|47|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7671203613281	2	472.76724	943.519927	-0.93004	-0.00043969	0.85085	0.00040225	-0.079188	-3.7437E-05	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.7932	1	8054	8054		26.693	2.4902	1	526610	+		3355	29455	2138	2141	3926	3926					0.045908213605116543
AVRWLARGQTG	11	Unmodified	_AVRWLARGQTG_					0	0	0		nc|ENSG00000170379|A6NFQ2-3|TCAF2;ENSG00000283528|ENST00000636941|TCAF2C;nc|ENSG00000170379|A6NFQ2-2|TCAF2;ENSG00000170379|ENST00000684770|TCAF2	nc|ENSG00000170379|A6NFQ2-3|TCAF2	nc|ENSG00000170379|A6NFQ2-3|TCAF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5641174316406	3	405.563273	1213.66799	1.3822	0.00056055	1.7193	0.00069727	3.1014	0.0012578	405.89828618709805	61.013	0.68465	61.044	60.43	61.114	0.0312					51	24	3	0	0	0	0.73893	1	5696	5696		16.53	0	1	508750			3356	15088	2139	2142	3927	3927					0.06970132614355862
AVSGSELTI	9	Unmodified	_AVSGSELTI_					0	0	0			REV__chr19:3425177-3426952|17|26.94|0.17|7.3|+|2|NFIC,None|1	REV__chr19:3425177-3426952|17|26.94|0.17|7.3|+|2|NFIC,None|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2628173828125	2	438.737283	875.460012	-0.076977	-3.3773E-05	-0.55436	-0.00024322	-0.63133	-0.00027699	438.73488221718833	39.263	0.22715	39.21	39.039	39.266	-0.052731					9	6	2	0	0	0	0.20789	1	2395	2395		11.511	0	1	50237	+		3357	15696	2140	2143	3928	3928					0.01730085906626755
AVSGSLESLG	10	Unmodified	_AVSGSLESLG_					0	0	0			REV__ENSG00000142655|ENST00000356607|PEX14	REV__ENSG00000142655|ENST00000356607|PEX14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.2400207519531	2	460.24019	918.465826	-0.87904	-0.00040457	1.3085	0.00060221	0.42942	0.00019764	460.2406355194744	27.262	0.92603	27.087	26.658	27.584	-0.17559					41	20	3	0	0	0	0.53935	1	1543	1543		53.351	8.9743	1	288190	+		3358	19750	2141	2144	3929	3929					0.0033318441827532297
AVSIHRSTG	9	Unmodified	_AVSIHRSTG_					0	0	0			REV__nc|ENSG00000225697|Q9BXS9-7|SLC26A6	REV__nc|ENSG00000225697|Q9BXS9-7|SLC26A6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2530517578125	2	464.253966	926.493378	-1.0637	-0.00049381	0.90249	0.00041899	-0.16118	-7.4827E-05	464.25425647374504	80.528	1.4241	80.665	79.54	80.965	0.13702					81	45	3	0	0	0	0.7932	1	7669	7669		26.693	0	1	413450	+		3359	30208	2142	2145	3930	3930					0.027191324691898444
AVSSGKRGIN	10	Unmodified	_AVSSGKRGIN_					0	0	0		chr15:41351147-41356039|45|10.87|0.12|6.49|+|2|None,NUSAP1|1	chr15:41351147-41356039|45|10.87|0.12|6.49|+|2|None,NUSAP1|1	chr15:41351147-41356039|45|10.87|0.12|6.49|+|2|None,NUSAP1|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.78021240234375	2	494.780348	987.546142	-0.98597	-0.00048784	1.2423	0.00061469	0.25638	0.00012685	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.8608	1	8296	8296		34.173	0.65696	1	385180			3360	187	2143	2146	3931	3931					0.05187090532001548
AVSSGKRGIN	10	Unmodified	_AVSSGKRGIN_					0	0	0		chr15:41351147-41356039|45|10.87|0.12|6.49|+|2|None,NUSAP1|1	chr15:41351147-41356039|45|10.87|0.12|6.49|+|2|None,NUSAP1|1	chr15:41351147-41356039|45|10.87|0.12|6.49|+|2|None,NUSAP1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7798767089844	2	494.780348	987.546142	-1.0037	-0.00049663	0.6697	0.00033135	-0.33405	-0.00016528	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.85981	1	8438	8438		35.152	0.97948	1	265620			3361	187	2143	2146	3932	3932					0.05187090532001548
AVSSLIRNKIH	11	Unmodified	_AVSSLIRNKIH_					0	0	0		ENST00000546531.5_1_12:49396684-49399341:-|nuORF;nc|ENSG00000181929|P54619-2|PRKAG1;ENSG00000181929|ENST00000548065|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1;ENST00000550448.5_1_12:49398244-49398481:-|nuORF	ENST00000546531.5_1_12:49396684-49399341:-|nuORF;ENST00000550448.5_1_12:49398244-49398481:-|nuORF	ENST00000550448.5_1_12:49398244-49398481:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.372314453125	2	619.372404	1236.73025	-0.10661	-6.6034E-05	-0.5997	-0.00037144	-0.70632	-0.00043747	619.3719649656875	101.89	1.4654	101.89	101.45	102.91	0					98	36	4	0	0	0	0.7434	1	10405	10405		23.523	1.5628	1	1989800			3362	7415;13655	2144	2147	3933	3933					0.12135858962687962
AVSSNRKIHLL	11	Unmodified	_AVSSNRKIHLL_					0	0	0		ENSG00000241322|ENST00000395906|FBXW10B;nc|ENSG00000171931|Q5XX13-3|FBXW10;nc|ENSG00000171931|Q5XX13-4|FBXW10;ENSG00000171931|ENST00000395665|FBXW10;nc|ENSG00000171931|Q5XX13-2|FBXW10;ENST00000574478.1_1_17:18651366-18682393:+|nuORF	ENSG00000241322|ENST00000395906|FBXW10B	ENSG00000241322|ENST00000395906|FBXW10B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.3720703125	2	619.372404	1236.73025	0.91931	0.0005694	-1.0988	-0.00068059	-0.17952	-0.00011119	619.3720836676316	101.53	1.7011	101.67	101.29	102.99	0.14102					92	41	4	0	0	0	0.72739	1	10649	10649		27.047	3.5246	1	2053400			3363	6724	2145	2148	3934	3934					0.121358589627107
AVTCSFSH	8	Unmodified	_AVTCSFSH_					0	0	0		ENSG00000164099|ENST00000296498|PRSS12	ENSG00000164099|ENST00000296498|PRSS12	ENSG00000164099|ENST00000296498|PRSS12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.1911926269531	2	426.189445	850.364338	0.69802	0.00029749	4.267	0.0018185	4.965	0.002116	426.19107388612673	96.62	2.0495	96.783	96.233	98.282	0.16316					76	47	3	0	0	0	0.884	1	9983	9983		33.516	1.5607	1	262680			3364	5917	2146	2149	3935	3935					-0.06682965485254044
AVTIQGVLRRK	11	Unmodified	_AVTIQGVLRRK_					0	0	0		ENST00000480743.1_1_1:178855116-178863183:+|nuORF;ENST00000478871.1_1_1:178863027-178885491:+|nuORF;nc|ENSG00000116191|Q86X27-3|RALGPS2;ENSG00000116191|ENST00000367635|RALGPS2	ENST00000480743.1_1_1:178855116-178863183:+|nuORF	ENST00000480743.1_1_1:178855116-178863183:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9327392578125	3	414.266456	1239.77754	-1.8935	-0.00078442	2.7793	0.0011514	0.88581	0.00036696	414.26757309021684	43.855	0.8775	43.863	43.391	44.269	0.0084534					32	20	2	0	0	0	0.17305	1	3052	3052		18.531	0	1	212060			3365	2907	2147	2150	3936	3936					0.167241382336897
AVTKTLSAS	9	Unmodified	_AVTKTLSAS_					0	0	0		ENSG00000213199|ENST00000349064|ASIC3	ENSG00000213199|ENST00000349064|ASIC3	ENSG00000213199|ENST00000349064|ASIC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2519226074219	2	439.2531	876.491647	0.81271	0.00035698	-1.2672	-0.0005566	-0.45445	-0.00019962	439.2525507024124	90.643	2.1669	91.094	90.57	92.737	0.45058					91	51	3	0	0	0	0.77244	1	10713	10713		32.812	4.9302	1	929460			3366	8581	2148	2151	3937	3937					0.04846078660591502
AVTKYTSAK	9	Unmodified	_AVTKYTSAK_					0	0	0		ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000124635|ENST00000339812|H2BC11	ENSG00000197903|ENST00000356950|H2BC12	ENSG00000197903|ENST00000356950|H2BC12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.77410888671875	2	484.7742	967.533846	0.75767	0.0003673	-0.3973	-0.0001926	0.36038	0.0001747	484.7737576059385	19.131	0.74899	18.661	18.412	19.161	-0.46967					38	16	4	0	0	0	0.12394	1	469	469		88.177	22.712	1	678250			3367	8212	2149	2152	3938	3938					0.04878054068944948
AVTKYTSAK	9	Unmodified	_AVTKYTSAK_					0	0	0		ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000124635|ENST00000339812|H2BC11	ENSG00000197903|ENST00000356950|H2BC12	ENSG00000197903|ENST00000356950|H2BC12	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	484.7742	967.533846	-0.12904	-6.2557E-05	0.66195	0.0003209	0.53291	0.00025834	484.7742911727836	19.346	0.72466	18.716	18.444	19.168	-0.62961	0.027808	0.00055389	NaN	88.177	37	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	622870			3368	8212	2149	2152							0.04878054068944948
AVTKYTSSK	9	Unmodified	_AVTKYTSSK_					0	0	0		chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15;chr6:27841661-27852109|62|16.63|0.85|4.28|+|ENST00000606613|H2BC15,H2BC15;ENSG00000203814|ENST00000369167|H2BC18;nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000146047|ENST00000274764|H2BC1;nc|ENSG00000285480|A0A2R8Y619|H2BK1;ENSG00000196890|ENST00000693095|H2BC26;ENST00000436555.1_1_1:228651916-228652012:-|nuORF	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.7716369628906	2	492.771657	983.528761	0.17468	8.608E-05	-0.16213	-7.9893E-05	0.012554	6.186E-06	492.7714422679862	18.203	0.6993	17.726	17.471	18.171	-0.47694					34	14	4	0	0	0	0.026876	3	360	348;360;371		120.31	56.099	1	968200			3369	473	2150	2153	3939;3940;3941	3940					0.03633750206336117
AVTKYTSSK	9	Unmodified	_AVTKYTSSK_					0	0	0		chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15;chr6:27841661-27852109|62|16.63|0.85|4.28|+|ENST00000606613|H2BC15,H2BC15;ENSG00000203814|ENST00000369167|H2BC18;nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000146047|ENST00000274764|H2BC1;nc|ENSG00000285480|A0A2R8Y619|H2BK1;ENSG00000196890|ENST00000693095|H2BC26;ENST00000436555.1_1_1:228651916-228652012:-|nuORF	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.77154541015625	2	492.771657	983.528761	0.029772	1.4671E-05	-0.13695	-6.7487E-05	-0.10718	-5.2816E-05	492.7714306041698	18.362	0.7488	17.741	17.493	18.241	-0.62141					39	16	4	0	0	0	0.045853	3	384	373;384;396		109.44	42.292	1	862500			3370	473	2150	2153	3942;3943;3944	3943					0.03633750206336117
AVTLTVPIV	9	Unmodified	_AVTLTVPIV_					0	0	0		ENSG00000139209|ENST00000266579|SLC38A4;ENSG00000188338|ENST00000614032|SLC38A3	ENSG00000139209|ENST00000266579|SLC38A4	ENSG00000139209|ENST00000266579|SLC38A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7930603027344	2	456.791861	911.569169	-0.85953	-0.00039263	3.5719	0.0016316	2.7123	0.001239	456.7934335420697	36.323	3.5767	36.267	33.824	37.401	-0.055901					213	80	5	0	0	0	0.76996	2	2380	2380;2392		33.516	6.7195	1	4833100			3371	4355	2151	2154	3945;3946	3945					0.10984716596749422
AVTLTVPIV	9	Unmodified	_AVTLTVPIV_					0	0	0		ENSG00000139209|ENST00000266579|SLC38A4;ENSG00000188338|ENST00000614032|SLC38A3	ENSG00000139209|ENST00000266579|SLC38A4	ENSG00000139209|ENST00000266579|SLC38A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7930603027344	2	456.791861	911.569169	-1.09	-0.00049788	3.7703	0.0017222	2.6803	0.0012244	456.7935086768371	36.547	3.494	36.558	33.881	37.375	0.011173					215	79	5	0	0	0	0.58151	3	2340	2317;2328;2340		47.916	8.0654	1	4477500			3372	4355	2151	2154	3947;3948;3949	3949					0.10984716596749422
AVTLTVPIV	9	Unmodified	_AVTLTVPIV_					0	0	0		ENSG00000139209|ENST00000266579|SLC38A4;ENSG00000188338|ENST00000614032|SLC38A3	ENSG00000139209|ENST00000266579|SLC38A4	ENSG00000139209|ENST00000266579|SLC38A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7933044433594	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.77546	1	1993	1993		31.955	1.4512	1	3484100			3373	4355	2151	2154	3950	3950					0.10984716596749422
AVTPIIPV	8	Unmodified	_AVTPIIPV_					0	0	0			REV__nc|ENSG00000163531|O94856-7|NFASC	REV__nc|ENSG00000163531|O94856-7|NFASC	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.2361145019531	2	405.260197	808.50584	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.194	1	63.316	62.816	63.816	0.12252								0	0	0	0.29199	1	5533	5533		29.842	1.5873	1		+		3374	29984	2152	2155	3951	3951					0.09392775879518922
AVTPIKRAED	10	Unmodified	_AVTPIKRAED_					0	0	0			REV__ENSG00000103599|ENST00000335894|IQCH	REV__ENSG00000103599|ENST00000335894|IQCH	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.304931640625	2	550.308938	1098.60332	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.065	1	58.048	57.548	58.548	-0.01643								0	0	0	0.45132	1	4929	4929		35.152	0.97948	1		+		3375	17424	2153	2156	3952	3952					0.05796513017708094
AVVDTINLIKR	11	Unmodified	_AVVDTINLIKR_					0	0	0			REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.3831176757812	2	621.382437	1240.75032	0.85949	0.00053407	0.24028	0.00014931	1.0998	0.00068338	621.3825030626452	18.28	0.53683	17.658	17.447	17.983	-0.62141					28	11	4	0	0	0	0.42858	1	363	363		56.434	1.6575	1	645220	+		3376	21050	2154	2157	3953	3953					0.13957609902627155
AVVEADYRWPP	11	Unmodified	_AVVEADYRWPP_					0	0	0			REV__ENSG00000164976|ENST00000297625|MYORG	REV__ENSG00000164976|ENST00000297625|MYORG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.8848571777344	3	434.887422	1301.64044	-0.82415	-0.00035841	-1.0723	-0.00046633	-1.8965	-0.00082474	434.8872435327256	28.163	0.52786	28.066	27.885	28.413	-0.096947					27	12	3	0	0	0	0.732	1	1689	1689		26.063	1.8316	1	138640	+		3377	21136	2155	2158	3954	3954					0.001681845634493584
AVVEELLSE	9	Unmodified	_AVVEELLSE_					0	0	0		ENSG00000214941|ENST00000399277|ZSWIM7	ENSG00000214941|ENST00000399277|ZSWIM7	ENSG00000214941|ENST00000399277|ZSWIM7	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7849426269531	2	494.763497	987.512442	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.639	1	38.586	38.086	39.086	-0.052731								0	0	0	0.2969	1	2302	2302		31.955	0	1				3378	8642	2156	2159	3955	3955					0.018186242495858096
AVVKGRKP	8	Unmodified	_AVVKGRKP_					0	0	0			REV__ENST00000370982.3_1_1:68168774-68168837:-|nuORF	REV__ENST00000370982.3_1_1:68168774-68168837:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.302734375	2	427.782162	853.549771	-0.68766	-0.00029417	-0.69775	-0.00029848	-1.3854	-0.00059265	427.78110407031886	68.253	0.14098	68.216	68.096	68.237	-0.036301					5	4	2	0	0	0	0.4196	1	6569	6569		12.959	0	1	12863	+		3379	25674	2157	2160	3956	3956					0.11713805096508167
AVVKLVKWPIS	11	Unmodified	_AVVKLVKWPIS_					0	0	0			REV__ENSG00000149218|ENST00000278505|ENDOD1	REV__ENSG00000149218|ENST00000278505|ENDOD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9326171875	3	413.932303	1238.77508	1.9789	0.00081913	-0.83989	-0.00034766	1.139	0.00047147	413.9318701140447	44.846	2.3922	44.842	44.201	46.593	-0.0041618					170	56	4	0	0	0	0.74771	1	3509	3509		22.562	1.7244	1	713740	+		3380	20154	2158	2161	3957	3957					0.16524289776043588
AVVKRGAF	8	Unmodified	_AVVKRGAF_					0	0	0			REV__nc|ENSG00000179950|Q9UHX1-4|PUF60	REV__nc|ENSG00000179950|Q9UHX1-4|PUF60	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.2502746582031	2	424.261062	846.507572	4.6747	0.0019833	-0.41439	-0.00017581	4.2603	0.0018075	424.2613020016501	107.01	0.3233	107.16	107.07	107.39	0.14929					10	8	2	0	0	0	0.4196	1	13118	13118		9.4706	0.64823	1	105150	+		3381	22370	2159	2162	3958	3958					0.07817829688133315
AVVMVEVI	8	Unmodified	_AVVMVEVI_					0	0	0		nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.9219970703125	2	430.251514	858.488476	0.59768	0.00025715	3.0312	0.0013042	3.6288	0.0015613	430.2527956895731	33.584	0.37585	33.753	33.526	33.902	0.16971					10	8	2	0	0	0	0.4196	1	2431	2431		37.028	1.8278	1	49587			3382	15321	2160	2163	3959	3959					0.05357112282217713
AVVQLLPE	8	Unmodified	_AVVQLLPE_					0	0	0			REV__ENST00000535325.5_1_3:45960546-45960702:-|nuORF	REV__ENST00000535325.5_1_3:45960546-45960702:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.761962890625	2	434.760561	867.506569	0.15252	6.6311E-05	1.8637	0.00081025	2.0162	0.00087656	434.760660552279	87.036	1.2069	87.482	87.061	88.268	0.44628					53	28	4	0	0	0	0.86288	1	10209	10209		26.796	3.7536	1	1015900	+		3383	28384	2161	2164	3960	3960					0.06751570528581397
AVVRLGVFSNG	11	Unmodified	_AVVRLGVFSNG_					0	0	0			REV__nc|ENSG00000067369|Q12888|TP53BP1;REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.8471069335938	2	559.819473	1117.62439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.93	1	112.95	112.45	113.45	0.016953								0	0	0	0.56276	1	13675	13675		14.865	0.72775	1		+		3384	16542;28939	2162	2165	3961	3961					0.07028523117219265
AVVRLSARIRP	11	Unmodified	_AVVRLSARIRP_					0	0	0		nc|ENSG00000100242|Q9UH99-3|SUN2;ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2672424316406	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.493	1	68.621	68.121	69.121	0.12838								0	0	0	0.56276	1	6167	6167		25.126	8.4086	1				3385	14812	2163	2166	3962	3962					0.1689555795353499
AVVTETTRLSA	11	Unmodified	_AVVTETTRLSA_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3194580078125	2	574.319502	1146.62445	1.0954	0.0006291	-1.1095	-0.00063718	-0.01407	-8.0805E-06	574.3187099892803	94.307	4.5457	94.353	93.159	97.704	0.046173					261	107	4	0	0	0	0.67778	1	9990	9990		35.152	4.8343	1	1593500			3386	8534	2164	2167	3963	3963					0.05700478326571101
AVVTETTRLSA	11	Unmodified	_AVVTETTRLSA_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3191528320312	2	574.319502	1146.62445	0.59155	0.00033974	-0.58489	-0.00033592	0.0066607	3.8253E-06	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.67778	1	9664	9664		35.152	0	1	1777600			3387	8534	2164	2167	3964	3964					0.05700478326571101
AVVTIIVIEY	10	Unmodified	_AVVTIIVIEY_					0	0	0			REV__ENSG00000090339|ENST00000264832|ICAM1	REV__ENSG00000090339|ENST00000264832|ICAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3406372070312	2	560.336633	1118.65871	3.1454	0.0017625	3.4672	0.0019428	6.6126	0.0037053	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.85694	1	13015	13015		21.96	1.4781	1	151040	+		3388	16984	2165	2168	3965	3965					0.10412926485469143
AVWQLSALDLV	11	Unmodified	_AVWQLSALDLV_					0	0	0			REV__ENSG00000011028|ENST00000303375|MRC2	REV__ENSG00000011028|ENST00000303375|MRC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5651550292969	3	405.564168	1213.67067	1.3715	0.00055625	-0.0084413	-3.4235E-06	1.3631	0.00055283	405.5640303977856	59.974	1.644	60.007	59.019	60.663	0.032822					112	41	3	0	0	0	0.72106	1	5600	5600		25.068	0	1	297440	+		3389	16174	2166	2169	3966	3966					0.07238543228640992
AVWQLSALDLV	11	Unmodified	_AVWQLSALDLV_					0	0	0			REV__ENSG00000011028|ENST00000303375|MRC2	REV__ENSG00000011028|ENST00000303375|MRC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5653991699219	3	405.564168	1213.67067	-1.8603	-0.00075448	3.3649	0.0013647	1.5046	0.00061022	405.5653949658049	63.143	1.4987	63.257	62.721	64.22	0.11388					139	74	3	0	0	0	0.7342	2	5553	5523;5553		17.167	0	1	273590	+		3390	16174	2166	2169	3967;3968	3968					0.07238543228640992
AVWQLSALDLV	11	Unmodified	_AVWQLSALDLV_					0	0	0			REV__ENSG00000011028|ENST00000303375|MRC2	REV__ENSG00000011028|ENST00000303375|MRC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.565185546875	3	405.564168	1213.67067	-1.0529	-0.00042701	2.5673	0.0010412	1.5144	0.00061418	405.5651485487608	63.261	1.4207	63.284	62.805	64.225	0.022984					129	62	3	0	0	0	0.72918	2	5552	5521;5552		23.378	0	1	264990	+		3391	16174	2166	2169	3969;3970	3970					0.07238543228640992
AVYDRPGASPK	11	Unmodified	_AVYDRPGASPK_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8060302734375	2	580.806562	1159.59857	-1.5698	-0.00091173	1.5661	0.0009096	-0.0036676	-2.1302E-06	580.8073350815711	27.478	0.52384	27.303	27.06	27.584	-0.17559					28	11	3	0	0	0	0.13035	1	1585	1585		85.862	27.632	1	403530			3392	880	2167	2170	3971	3971					0.02515628874948561
AVYDRPGASPK	11	Unmodified	_AVYDRPGASPK_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	580.806562	1159.59857	0.77584	0.00045062	-0.95886	-0.00055691	-0.18302	-0.0001063	580.8059010855591	27.491	0.5087	27.237	27.034	27.543	-0.25465	-0.033142	-0.0014442	NaN	85.862	31	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	370950			3393	880	2167	2170							0.02515628874948561
AVYENAREK	9	Unmodified	_AVYENAREK_					0	0	0		ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8;ENSG00000164941|ENST00000523731|INTS8	ENST00000523321.5_1_8:95835614-95871872:+|nuORF	ENST00000523321.5_1_8:95835614-95871872:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.27685546875	2	540.277638	1078.54072	0.2419	0.00013069	-0.19813	-0.00010705	0.04377	2.3648E-05	540.277467226308	20.169	0.59767	19.71	19.502	20.1	-0.4591					25	12	3	0	0	0	0.72476	1	609	609		38.754	2.3069	1	218590			3394	6027	2168	2171	3972	3972					0.004593669495079666
AVYETPTAH	9	Unmodified	_AVYETPTAH_					0	0	0		nc|ENSG00000078902|Q9H0E2-2|TOLLIP;ENSG00000078902|ENST00000317204|TOLLIP	nc|ENSG00000078902|Q9H0E2-2|TOLLIP	nc|ENSG00000078902|Q9H0E2-2|TOLLIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7401123046875	2	494.740357	987.46616	0.1749	8.653E-05	-0.10396	-5.1433E-05	0.070941	3.5097E-05	494.7401236922403	33.748	0.75209	33.918	33.526	34.278	0.16971					37	17	3	0	0	0	0.18566	3	2465	2441;2453;2465		76.847	29.858	1	702090			3395	1408	2169	2172	3973;3974;3975	3975					-0.028073958618620054
AVYETPTAH	9	Unmodified	_AVYETPTAH_					0	0	0		nc|ENSG00000078902|Q9H0E2-2|TOLLIP;ENSG00000078902|ENST00000317204|TOLLIP	nc|ENSG00000078902|Q9H0E2-2|TOLLIP	nc|ENSG00000078902|Q9H0E2-2|TOLLIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7400817871094	2	494.740357	987.46616	0.87477	0.00043278	-0.83337	-0.0004123	0.041403	2.0484E-05	494.73966957219454	33.751	0.78719	34.056	33.66	34.447	0.30494					38	18	3	0	0	0	0.18566	1	2468	2468		76.847	11.043	1	704510			3396	1408	2169	2172	3976	3976					-0.028073958618620054
AVYKTHVEK	9	Unmodified	_AVYKTHVEK_					0	0	0		ENSG00000196954|ENST00000444739|CASP4;ENST00000529565.1_1_11:104819221-104819389:-|nuORF;ENST00000534356.1_1_11:104817674-104819389:-|nuORF;nc|ENSG00000196954|P49662-2|CASP4	ENSG00000196954|ENST00000444739|CASP4	ENSG00000196954|ENST00000444739|CASP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.8010864257812	2	537.800749	1073.58694	0.40157	0.00021597	-0.41932	-0.00022551	-0.017752	-9.547E-06	537.8003055193618	18.811	0.38504	18.334	18.171	18.556	-0.47694					19	8	3	0	0	0	0.39367	2	446	432;446		58.23	15.21	1	179670			3397	8118	2170	2173	3977;3978	3978					0.0530943185160595
AVYKVLGT	8	Unmodified	_AVYKVLGT_					0	0	0		nc|ENSG00000141934|O43688-3|PLPP2;ENSG00000141934|ENST00000434325|PLPP2;nc|ENSG00000141934|O43688-2|PLPP2	nc|ENSG00000141934|O43688-3|PLPP2	nc|ENSG00000141934|O43688-3|PLPP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.2220764160156	2	425.755278	849.496004	-1.8605	-0.00079212	-3.9534	-0.0016832	-5.8139	-0.0024753	425.75359602558444	88.238	0.86636	88.407	88.083	88.95	0.16922					31	20	2	0	0	0	0.4196	1	8706	8706		18.324	4.5491	1	71096			3398	4533	2171	2174	3979	3979					0.06523587874153236
AWDLIPLRRR	10	Unmodified	_AWDLIPLRRR_					0	0	0			REV__ENSG00000147606|ENST00000276609|SLC26A7	REV__ENSG00000147606|ENST00000276609|SLC26A7	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3924560546875	2	648.388388	1294.76222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.67	1	116.64	116.14	117.14	-0.02433								0	0	0	0.45132	1	12923	12923		6.3127	0	1		+		3399	20078	2172	2175	3980	3980					0.12663271436508694
AWGAVPSR	8	Unmodified	_AWGAVPSR_					0	0	0		ENST00000480574.1_1_1:45212216-45212429:+|nuORF	ENST00000480574.1_1_1:45212216-45212429:+|nuORF	ENST00000480574.1_1_1:45212216-45212429:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.22747802734375	2	422.22722	842.439886	-1.6467	-0.00069529	3.5886	0.0015152	1.9419	0.00081991	422.2286089277903	56.345	1.4516	56.345	54.998	56.45	0					98	47	3	0	0	0	0.79929	1	4834	4834		18.324	2.6882	1	495340			3400	12441	2173	2176	3981	3981					0.012363797573243573
AWKSAFVAT	9	Unmodified	_AWKSAFVAT_					0	0	0		ENST00000511056.1_1_5:180480165-180482232:+|nuORF;ENST00000511589.1_1_5:180479790-180480560:+|nuORF;ENST00000509395.1_1_5:180480078-180480560:+|nuORF;nc|ENSG00000165810|Q6UXG8-2|BTNL9;nc|ENSG00000165810|Q6UXG8-3|BTNL9;ENSG00000165810|ENST00000327705|BTNL9	ENST00000511056.1_1_5:180480165-180482232:+|nuORF	ENST00000511056.1_1_5:180480165-180482232:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.24261474609375	2	490.763635	979.512717	-1.969	-0.0009663	-2.0138	-0.00098831	-3.9828	-0.0019546	490.762449773505	19.368	0.28389	19.368	19.242	19.526	0					14	10	2	0	0	0	0.20789	1	400	400		10.866	0	1	24114			3401	6127	2174	2177	3982	3982					0.022140887600926362
AWLSYRLLK	9	Unmodified	_AWLSYRLLK_					0	0	0		nc|ENSG00000253485|Q9Y5G8-2|PCDHGA5;ENSG00000253485|ENST00000518069|PCDHGA5;nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8;ENSG00000253767|ENST00000398604|PCDHGA8;nc|ENSG00000253873|Q9Y5H2-3|PCDHGA11;nc|ENSG00000253873|Q9Y5H2-2|PCDHGA11;ENSG00000253873|ENST00000398587|PCDHGA11;nc|ENSG00000253159|O60330-2|PCDHGA12;ENSG00000253159|ENST00000252085|PCDHGA12;nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6;ENSG00000253731|ENST00000517434|PCDHGA6	nc|ENSG00000253485|Q9Y5G8-2|PCDHGA5;nc|ENSG00000253159|O60330-2|PCDHGA12;nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6	nc|ENSG00000253159|O60330-2|PCDHGA12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3453979492188	2	575.342584	1148.67061	2.6142	0.0015041	2.7738	0.0015959	5.388	0.0031	575.3441275619858	98.676	2.5508	98.621	98.113	100.66	-0.054825					162	58	5	0	0	0	0.78058	1	10647	10647		30.504	2.6214	1	4409300			3402	8854;8859;8867	2175	2178	3983	3983					0.10222588019314571
AWMRLLPLLRF	11	Unmodified	_AWMRLLPLLRF_					0	0	0			REV__ENST00000488639.6_1_19:43013263-43015500:-|nuORF	REV__ENST00000488639.6_1_19:43013263-43015500:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.287353515625	3	472.61632	1414.82713	-0.10739	-5.0754E-05	3.7351	0.0017653	3.6277	0.0017145	472.6180628890527	100.52	1.3031	100.55	99.827	101.13	0.031036					41	29	2	0	0	0	0.18028	1	10603	10603		14.694	1.1857	1	70281	+		3403	27599	2176	2179	3984	3984					0.13631129918144325
AWNESLALDA	10	Unmodified	_AWNESLALDA_					0	0	0			REV__ENST00000400933.2_1_1:247348476-247348617:-|nuORF	REV__ENST00000400933.2_1_1:247348476-247348617:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.26318359375	2	545.264196	1088.51384	-0.25462	-0.00013883	-0.1898	-0.00010349	-0.44442	-0.00024233	545.2639698481355	52.782	0.64312	52.779	52.51	53.153	-0.0033035					32	18	2	0	0	0	0.30722	1	4583	4583		71.877	7.6702	1	171760	+		3404	19523	2177	2180	3985	3985					-0.026877416616798655
AWPLVLPS	8	Unmodified	_AWPLVLPS_					0	0	0			REV__ENST00000321287.12_1_19:52839700-52851056:+|nuORF	REV__ENST00000321287.12_1_19:52839700-52851056:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879943847656	2	441.757821	881.501089	-0.45476	-0.00020089	3.584	0.0015832	3.1292	0.0013823	441.7593210984219	39.117	0.88226	39.129	38.893	39.775	0.011173					24	20	2	0	0	0	0.4196	1	2765	2765		20.482	0	1	103800	+		3405	25009	2178	2181	3986	3986					0.055598917367547074
AWRAAVLGG	9	Unmodified	_AWRAAVLGG_					0	0	0		ENST00000513371.1_1_4:128886637-128887203:+|nuORF;ENST00000388795.9_1_4:128886616-128922876:+|nuORF	ENST00000513371.1_1_4:128886637-128887203:+|nuORF	ENST00000513371.1_1_4:128886637-128887203:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7556457519531	2	450.756144	899.497735	-0.14135	-6.3713E-05	-4.1513	-0.0018712	-4.2927	-0.0019349	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.76996	1	8205	8205		33.516	3.0119	1	337080			3406	10985	2179	2182	3987	3987					0.043966416827515786
AWRAAVLGG	9	Unmodified	_AWRAAVLGG_					0	0	0		ENST00000513371.1_1_4:128886637-128887203:+|nuORF;ENST00000388795.9_1_4:128886616-128922876:+|nuORF	ENST00000513371.1_1_4:128886637-128887203:+|nuORF	ENST00000513371.1_1_4:128886637-128887203:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7546691894531	2	450.756144	899.497735	-1.264	-0.00056978	-3.0711	-0.0013843	-4.3351	-0.0019541	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.77546	1	7688	7688		31.955	2.8053	1	414240			3407	10985	2179	2182	3988	3988					0.043966416827515786
AWRAAVLI	8	Unmodified	_AWRAAVLI_					0	0	0		ENST00000514698.5_1_4:980866-997838:+|nuORF;ENSG00000127415|ENST00000514224|IDUA;nc|ENSG00000127415|P35475-2|IDUA	ENST00000514698.5_1_4:980866-997838:+|nuORF	ENST00000514698.5_1_4:980866-997838:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.27435302734375	2	450.276712	898.538872	-1.7763	-0.00079984	-3.3706	-0.0015177	-5.147	-0.0023176	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.89457	2	9417	9417;9465		37.028	7.1869	1	35178000			3408	3495	2180	2183	3989;3990	3989					0.08554402722222676
AWSKAVILN	9	Unmodified	_AWSKAVILN_					0	0	0			REV__nc|ENSG00000148773|P46013-2|MKI67	REV__nc|ENSG00000148773|P46013-2|MKI67	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.28985595703125	2	501.292559	1000.57057	-1.4828	-0.00074334	-2.8745	-0.001441	-4.3573	-0.0021843	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.7932	1	8052	8052		26.693	1.1189	1	2793500	+		3409	15466	2181	2184	3991	3991					0.07030350685511166
AWVLLILGF	9	Unmodified	_AWVLLILGF_					0	0	0		ENSG00000178033|ENST00000368599|CALHM5	ENSG00000178033|ENST00000368599|CALHM5	ENSG00000178033|ENST00000368599|CALHM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3168334960938	2	516.318046	1030.62154	-0.2877	-0.00014854	-4.0257	-0.0020785	-4.3134	-0.0022271	516.3159037753348	84.02	1.328	84.185	83.926	85.255	0.1651					41	30	2	0	0	0	0.36201	1	8155	8155		60.404	14.452	1	291560			3410	7178	2182	2185	3992	3992					0.10745299730388069
AWVLLILGF	9	Unmodified	_AWVLLILGF_					0	0	0		ENSG00000178033|ENST00000368599|CALHM5	ENSG00000178033|ENST00000368599|CALHM5	ENSG00000178033|ENST00000368599|CALHM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3161010742188	2	516.318046	1030.62154	-1.4284	-0.00073751	-2.7993	-0.0014453	-4.2277	-0.0021829	516.316409958008	84.135	0.73714	84.273	83.961	84.698	0.13811					42	16	3	0	0	0	0.55559	2	8142	8142;8155		49.211	7.0666	1	238630			3411	7178	2182	2185	3993;3994	3993					0.10745299730388069
AWWCWRTCWCW	11	Unmodified	_AWWCWRTCWCW_					0	0	0		ENST00000246115.4_1_19:3178863-3179049:+|nuORF	ENST00000246115.4_1_19:3178863-3179049:+|nuORF	ENST00000246115.4_1_19:3178863-3179049:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.7935791015625	3	529.547472	1585.62059	0.24823	0.00013145	-0.27489	-0.00014557	-0.026656	-1.4115E-05	529.8821865035932	36.083	0.10093	36.186	36.116	36.217	0.10306					4	2	2	0	0	0	0.18066	1	1962	1962		19.263	10.463	1	49417			3412	9271	2183	2186	3995	3995					-0.14879929244125378
AWYWRRRPKRL	11	Unmodified	_AWYWRRRPKRL_					0	0	0		ENSG00000172935|ENST00000309099|MRGPRF	ENSG00000172935|ENST00000309099|MRGPRF	ENSG00000172935|ENST00000309099|MRGPRF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.9762573242188	3	529.975899	1586.90587	0.2077	0.00011008	3.0573	0.0016203	3.265	0.0017304	529.9775180342994	27.152	1.0147	26.976	26.658	27.673	-0.17559					66	22	5	0	0	0	0.84494	1	1526	1526		6.3209	2.7018	1	826980			3413	6805	2184	2187	3996	3996					0.13589118267418598
AWYWRRRPKRL	11	Unmodified	_AWYWRRRPKRL_					0	0	0		ENSG00000172935|ENST00000309099|MRGPRF	ENSG00000172935|ENST00000309099|MRGPRF	ENSG00000172935|ENST00000309099|MRGPRF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	529.975899	1586.90587	0.54036	0.00028638	2.8743	0.0015233	3.4147	0.0018097	529.9767582098913	27.093	0.28598	27.134	26.915	27.201	0.040834	0.16664	0.00050278	NaN	6.3209	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15769			3414	6805	2184	2187							0.13589118267418598
AYDPIHHIK	9	Unmodified	_AYDPIHHIK_					0	0	0			REV__ENST00000550851.5_1_12:71833860-71960711:+|nuORF	REV__ENST00000550851.5_1_12:71833860-71960711:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.2916259765625	2	547.293091	1092.57163	-0.44655	-0.00024439	0.30023	0.00016432	-0.14631	-8.0077E-05	547.2931896620789	62.26	0.53449	62.289	62.102	62.636	0.029575					34	26	2	0	0	0	0.72402	1	5816	5816		38.806	0	1	81635	+		3415	19531	2185	2188	3997	3997					0.029045650544276214
AYEEYIRPL	9	Unmodified	_AYEEYIRPL_					0	0	0		ENSG00000168306|ENST00000302819|ACOX2;ENST00000467738.1_1_3:58490953-58512473:-|nuORF	ENSG00000168306|ENST00000302819|ACOX2	ENSG00000168306|ENST00000302819|ACOX2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.7902221679688	2	577.298039	1152.58152	-1.0364	-0.00059831	1.5116	0.00087263	0.47517	0.00027432	577.3005882906535	60.633	0.25482	61.186	61.07	61.325	0.55323					11	6	3	0	0	0	0.20789	1	6476	6476		38.806	4.6336	1	319300			3416	6391	2186	2189	3998	3998					0.011337082691397882
AYEIFGLVN	9	Unmodified	_AYEIFGLVN_					0	0	0		ENSG00000158828|ENST00000321556|PINK1;ENST00000492302.1_1_1:20975445-20977181:+|nuORF;nc|ENSG00000158828|Q9BXM7-2|PINK1;ENST00000400490.2_1_1:20972014-20977181:+|nuORF	ENSG00000158828|ENST00000321556|PINK1	ENSG00000158828|ENST00000321556|PINK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.2715454101562	2	513.26875	1024.52295	-1.151	-0.00059076	0.76189	0.00039105	-0.38908	-0.0001997	513.2690269456646	76.087	0.70016	76.176	75.74	76.44	0.089363					38	21	3	0	0	0	0.76996	1	7088	7088		33.516	1.5607	1	120320			3417	5499	2187	2190	3999	3999					0.011666516946661432
AYELLGVLRS	10	Unmodified	_AYELLGVLRS_					0	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8208618164062	2	560.821681	1119.62881	-0.40201	-0.00022545	-2.9229	-0.0016392	-3.3249	-0.0018647	560.8199126084926	92.305	2.2839	92.767	91.977	94.26	0.46249					128	53	3	0	0	0	0.86763	1	11059	11059		26.693	2.1737	1	273790			3418	8803	2188	2191	4000	4000					0.07377987540144204
AYFKGTPLY	9	Unmodified	_AYFKGTPLY_					0	0	0			REV__ENST00000593731.1_3_19:18288727-18288919:+|nuORF	REV__ENST00000593731.1_3_19:18288727-18288919:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2791748046875	2	530.279118	1058.54368	0.60487	0.00032075	-0.30853	-0.00016361	0.29634	0.00015714	530.2794405918029	59.156	1.3576	59.126	58.133	59.49	-0.030888					75	39	3	0	0	0	0.31972	1	5517	5517		63.306	9.9548	1	335700	+		3419	29229	2189	2192	4001	4001					0.01675242074338712
AYFRRRKRR	9	Unmodified	_AYFRRRKRR_					0	0	0			REV__ENST00000565493.1_1_20:34637734-34637854:-|nuORF	REV__ENST00000565493.1_1_20:34637734-34637854:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.93389892578125	3	436.933923	1307.77994	0.49799	0.00021759	-0.39775	-0.00017379	0.10024	4.3799E-05	436.93369927878706	20.732	2.5953	20.273	19.595	22.19	-0.4591					152	59	4	0	0	0	0.7932	1	684	684		23.523	3.8958	1	492360	+		3420	28856	2190	2193	4002	4002					0.13836031481991995
AYGEIYYDSN	10	Unmodified	_AYGEIYYDSN_					0	0	0		nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.7506713867188	2	597.751118	1193.48768	-0.5661	-0.00033839	1.6511	0.00098696	1.085	0.00064858	597.7515208228368	71.723	0.417	71.757	71.633	72.05	0.033997					28	15	2	0	0	0	0.64457	1	6805	6805		47.657	14.845	1	91860			3421	14976	2191	2194	4003	4003					-0.10132055623807901
AYIDIQLRIAS	11	Unmodified	_AYIDIQLRIAS_					0	0	0		ENSG00000113889|ENST00000644859|KNG1;nc|ENSG00000113889|P01042-3|KNG1;nc|ENSG00000113889|P01042-2|KNG1	ENSG00000113889|ENST00000644859|KNG1	ENSG00000113889|ENST00000644859|KNG1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	631.399169921875	2	631.858795	1261.70304	1.4533	0.00091826	-3.6974	-0.0023362	-2.2441	-0.001418	632.3579376017345	104.36	1.0809	104.53	104.14	105.22	0.17096					44	26	2	0	0	0	0.17552	1	11146	11146		17.468	0	1	202520			3422	2750	2192	2195	4004	4004					0.08265330631661527
AYKGGRLV	8	Unmodified	_AYKGGRLV_					0	0	0			REV__nc|ENSG00000211899|P01871-1|IGHM	REV__nc|ENSG00000211899|P01871-1|IGHM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.25830078125	2	432.25852	862.502486	0.095672	4.1355E-05	-1.4893	-0.00064377	-1.3936	-0.00060241	432.25767954187023	68.33	1.4604	68.877	68.284	69.744	0.54722					66	34	3	0	0	0	0.88915	1	7552	7552		35.201	1.6851	1	472160	+		3423	30194	2193	2196	4005	4005					0.06573525825513116
AYKNVVGARR	10	Unmodified	_AYKNVVGARR_					0	0	0		ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENSG00000128245|ENST00000248975|YWHAH;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;nc|ENSG00000166913|P31946-2|YWHAB;ENSG00000164924|ENST00000395958|YWHAZ;ENSG00000166913|ENST00000353703|YWHAB;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;ENSG00000170027|ENST00000307630|YWHAG	ENST00000397492.1_1_22:32346295-32352776:+|nuORF	ENST00000397492.1_1_22:32346295-32352776:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.33056640625	2	567.330539	1132.64652	-0.50942	-0.00028901	0.5149	0.00029212	0.0054817	3.1099E-06	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.88945	1	10713	10713		10.866	3.1753	1	5685000			3424	11153	2194	2197	4006	4006					0.08550747585650242
AYKRGLVG	8	Unmodified	_AYKRGLVG_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.25830078125	2	432.25852	862.502486	0.40609	0.00017553	-1.8282	-0.00079027	-1.4221	-0.00061473	432.2575947247643	68.412	1.5069	68.797	68.224	69.731	0.38482					60	35	2	0	0	0	0.86288	1	7539	7539		26.796	1.3459	1	399210			3425	1742	2195	2198	4007	4007					0.06573525825524484
AYKRGLVG	8	Unmodified	_AYKRGLVG_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.25836181640625	2	432.25852	862.502486	0.095672	4.1355E-05	-1.4893	-0.00064377	-1.3936	-0.00060241	432.25767954187023	68.33	1.4604	68.877	68.284	69.744	0.54722					66	34	3	0	0	0	0.884	1	7529	7529		33.516	5.2613	1	472160			3426	1742	2195	2198	4008	4008					0.06573525825524484
AYKYFEGID	9	Unmodified	_AYKYFEGID_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.2472534179688	2	553.263665	1104.51278	-0.69392	-0.00038392	-2.3077	-0.0012768	-3.0017	-0.0016607	553.2624697402579	36.025	0.27494	36.006	35.83	36.105	-0.018677					9	5	2	0	0	0	0.20789	1	2284	2284		12.207	0	1	23920			3427	2259	2196	2199	4009	4009					-0.03529956030570247
AYLDKKHTIF	10	Unmodified	_AYLDKKHTIF_					0	0	0		ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2	ENSG00000100023|ENST00000398831|PPIL2	ENSG00000100023|ENST00000398831|PPIL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	618.345947265625	2	618.342781	1234.67101	1.2492	0.00077242	3.7041	0.0022904	4.9533	0.0030628	618.344978551102	97.744	3.3917	97.971	96.779	100.17	0.22787					230	79	4	0	0	0	0.85981	2	10175	10068;10175		35.152	7.3622	1	960930			3428	1785	2197	2200	4010;4011	4011					0.06305962948522392
AYLPRSPLPS	10	Unmodified	_AYLPRSPLPS_					0	0	0			REV__ENST00000465335.1_1_1:6260785-6269413:-|nuORF	REV__ENST00000465335.1_1_1:6260785-6269413:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8058471679688	2	550.808574	1099.60259	0.24565	0.0001353	-3.6935	-0.0020344	-3.4479	-0.0018991	550.8063464981013	29.888	1.5118	29.799	29.104	30.616	-0.089546					94	34	5	0	0	0	0.70553	1	1898	1898		44.377	9.2252	1	1346500	+		3429	27107	2198	2201	4012	4012					0.05677718368656315
AYPVSFSAS	9	Unmodified	_AYPVSFSAS_					0	0	0			REV__ENSG00000082397|ENST00000341928|EPB41L3	REV__ENSG00000082397|ENST00000341928|EPB41L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7222595214844	2	464.724175	927.433798	-0.33703	-0.00015663	-2.376	-0.0011042	-2.7131	-0.0012608	464.72291150494004	16.53	0.24507	16.45	16.327	16.572	-0.080017					15	9	2	0	0	0	0.7932	1	130	130		25.45	1.2474	1	121370	+		3430	16839	2199	2202	4013	4013					-0.03282183264843752
AYQNLRQRV	9	Unmodified	_AYQNLRQRV_					0	0	0		ENSG00000038219|ENST00000040738|BOD1L1	ENSG00000038219|ENST00000040738|BOD1L1	ENSG00000038219|ENST00000040738|BOD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3179931640625	2	574.320171	1146.62579	-1.3729	-0.0007885	0.18056	0.0001037	-1.1924	-0.0006848	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.7932	1	9798	9798		24.203	0.68005	1	1586900			3431	913	2200	2203	4014	4014					0.058341572059816826
AYRKLALK	8	Unmodified	_AYRKLALK_					0	0	0		ENSG00000086061|ENST00000330899|DNAJA1;nc|ENSG00000086061|P31689-2|DNAJA1;nc|ENSG00000140403|Q8WW22-2|DNAJA4;ENSG00000140403|ENST00000394852|DNAJA4;ENST00000398991.3_1_4:100831524-100867699:-|nuORF;nc|ENSG00000168724|Q5F1R6-3|DNAJC21;ENSG00000168724|ENST00000648817|DNAJC21;ENSG00000164031|ENST00000442697|DNAJB14;ENSG00000170464|ENST00000302060|DNAJC18;ENST00000567680.1_1_15:66064063-66064450:-|nuORF;nc|ENSG00000164031|Q8TBM8-2|DNAJB14;ENST00000507405.5_1_5:138755893-138773164:-|nuORF;nc|ENSG00000293135|Q8WWF6|DNAJB3;ENST00000474664.5_1_4:100844167-100867674:-|nuORF;nc|ENSG00000168724|Q5F1R6-2|DNAJC21;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6;ENST00000488001.5_1_7:157151266-157161444:+|nuORF	ENSG00000086061|ENST00000330899|DNAJA1;ENST00000526843.2_1_11:127810983-127811547:-|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.8105773925781	2	481.810919	961.607286	-0.63948	-0.00030811	1.0703	0.00051569	0.43083	0.00020758	481.81105254343703	30.272	0.70796	30.3	30.008	30.716	0.028618					25	15	3	0	0	0	0.89962	1	1983	1983		38.806	1.647	1	224660			3432	2271;1551	2201	2204	4015	4015					0.12494647302060002
AYRLHLGA	8	Unmodified	_AYRLHLGA_					0	0	0		nc|ENSG00000110013|Q9HAT2-2|SIAE;ENSG00000110013|ENST00000263593|SIAE	nc|ENSG00000110013|Q9HAT2-2|SIAE	nc|ENSG00000110013|Q9HAT2-2|SIAE	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.7554626464844	2	450.756144	899.497735	-1.2719	-0.00057332	-3.1375	-0.0014143	-4.4094	-0.0019876	450.7546758979468	81.682	3.9504	81.682	80.4	84.351	0					234	110	3	0	0	0	0.90465	1	7719	7719		40.573	1.7665	1	177450			3433	2500	2202	2205	4016	4016					0.043966416827515786
AYSKTQLY	8	Unmodified	_AYSKTQLY_					0	0	0			REV__nc|ENSG00000144642|Q6XE24-3|RBMS3	REV__nc|ENSG00000144642|Q6XE24-3|RBMS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.25262451171875	2	487.2531	972.491647	0.64569	0.00031461	0.84492	0.00041169	1.4906	0.0007263	487.25338430429883	28.873	0.79298	28.699	28.399	29.192	-0.17336					52	18	4	0	0	0	0.87922	1	1767	1767		31.955	0	1	1461400	+		3434	29907	2203	2206	4017	4017					0.004300786605654139
AYVHMVTHF	9	Unmodified	_AYVHMVTHF_					0	0	0		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.2374877929688	2	552.768394	1103.52224	-1.2914	-0.00071383	0.74131	0.00040977	-0.55006	-0.00030406	552.7686803025249	47.243	0.4892	47.715	47.52	48.009	0.47139					17	11	2	0	0	0	0.20789	1	4509	4509		25.45	13.243	1	398010			3435	4387	2204	2207	4018	4018					-0.025384662260421464
AYVHMVTHF	9	Unmodified	_AYVHMVTHF_					0	0	0		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	552.768394	1103.52224	-1.1285	-0.00062381	1.0174	0.00056238	-0.11114	-6.1436E-05	552.7685629963399	47.038	0.49923	47.961	47.739	48.238	0.92315	0.12321	0.00015372	NaN	31.955	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	503400			3436	4387	2204	2207							-0.025384662260421464
AYVLEDIL	8	Unmodified	_AYVLEDIL_					0	0	0		nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000559367.1_1_4:74034679-74088744:-|nuORF	nc|ENSG00000132466|O75179-7|ANKRD17	nc|ENSG00000132466|O75179-7|ANKRD17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.25848388671875	2	468.257851	934.501149	1.2711	0.00059521	-1.0589	-0.00049582	0.21224	9.9384E-05	468.2571965377802	99.097	1.615	99.46	99.055	100.67	0.36292					90	40	3	0	0	0	0.52826	1	12034	12034		74.517	3.1387	1	3646500			3437	14922	2205	2208	4019	4019					0.031278469460858105
AYVRGYSDSY	10	Unmodified	_AYVRGYSDSY_					0	0	0			REV__nc|ENSG00000167281|A6NFN3|RBFOX3	REV__nc|ENSG00000167281|A6NFN3|RBFOX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.7664794921875	2	590.767103	1179.51965	-0.050007	-2.9542E-05	0.12657	7.4772E-05	0.076561	4.523E-05	590.7669689449548	53.54	0.46074	53.515	53.272	53.732	-0.02475					26	10	3	0	0	0	0.6116	1	4782	4782		49.442	3.4896	1	174010	+		3438	16763	2206	2209	4020	4020					-0.06292643150004551
AYVTVLHLQP	10	Unmodified	_AYVTVLHLQP_					0	0	0			REV__ENSG00000148734|ENST00000277942|NPFFR1	REV__ENSG00000148734|ENST00000277942|NPFFR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.8228759765625	2	570.824224	1139.63389	0.51778	0.00029556	-0.34598	-0.0001975	0.1718	9.8065E-05	570.8238767890401	61.345	0.78047	61.464	61.349	62.129	0.11901					67	35	2	0	0	0	0.86218	1	5341	5341		32.812	1.2826	1	786490	+		3439	20134	2207	2210	4021	4021					0.06966291402773095
AYWGITLIWL	10	Unmodified	_AYWGITLIWL_					0	0	0		nc|ENSG00000293504|Q99463|NPY6R	nc|ENSG00000293504|Q99463|NPY6R	nc|ENSG00000293504|Q99463|NPY6R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	618.34619140625	2	618.344792	1234.67503	-1.2296	-0.00076029	3.0494	0.0018856	1.8198	0.0011253	618.3465539597456	97.787	3.3462	97.982	96.915	100.26	0.19585					219	77	4	0	0	0	0.85934	1	10180	10180		35.618	2.8059	1	806570			3440	15355	2208	2211	4022	4022					0.06708052442240842
AYYPSPPG	8	Unmodified	_AYYPSPPG_					0	0	0		nc|ENSG00000104413|Q6NXG1-5|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;ENSG00000104413|ENST00000433389|ESRP1	nc|ENSG00000104413|Q6NXG1-5|ESRP1	nc|ENSG00000104413|Q6NXG1-5|ESRP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.20172119140625	2	426.200336	850.386119	0.24178	0.00010305	4.0457	0.0017243	4.2875	0.0018273	426.2019146237618	81.797	1.1184	82.296	81.953	83.071	0.49966					56	27	3	0	0	0	0.89567	2	9464	9464;9488		57.453	7.9603	1	870140			3441	2130	2209	2212	4023;4024	4023					-0.04505837465046625
AYYYFLGRSV	10	Unmodified	_AYYYFLGRSV_					0	0	0			REV__nc|ENSG00000141293|Q86WV1-2|SKAP1	REV__nc|ENSG00000141293|Q86WV1-2|SKAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8121948242188	2	619.813856	1237.61316	1.1883	0.00073655	-0.52867	-0.00032768	0.65967	0.00040887	619.8130616287558	54.182	0.67599	54.238	53.825	54.501	0.055614					33	21	2	0	0	0	0.86225	1	4448	4448		20.947	0	1	159180	+		3442	19670	2210	2213	4025	4025					0.0038570102308312926
CAAAVQPGPF	10	Unmodified	_CAAAVQPGPF_					0	0	0			REV__ENST00000369681.9_1_6:84569383-84569569:+|nuORF	REV__ENST00000369681.9_1_6:84569383-84569569:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.7340393066406	2	480.73402	959.453487	1.0522	0.00050583	-0.72054	-0.00034639	0.33166	0.00015944	480.7336024129339	23.759	0.64035	23.377	23.153	23.794	-0.38178					20	14	2	0	0	0	0.84112	1	1100	1100		37.159	11.709	1	77887	+		3443	25627	2211	2214	4026	4026					-0.027861305257374624
CAAAVQPGPF	10	Unmodified	_CAAAVQPGPF_					0	0	0			REV__ENST00000369681.9_1_6:84569383-84569569:+|nuORF	REV__ENST00000369681.9_1_6:84569383-84569569:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	480.73402	959.453487	0.5805	0.00027906	-0.42934	-0.0002064	0.15115	7.2664E-05	480.73378590368134	23.776	0.59212	23.201	22.92	23.512	-0.57415	-0.087795	0.00012606	NaN	37.159	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100530	+		3444	25627	2211	2214							-0.027861305257374624
CADNQGLEY	9	Unmodified	_CADNQGLEY_					0	0	0			REV__nc|ENSG00000164654|Q9NXC5-2|MIOS	REV__nc|ENSG00000164654|Q9NXC5-2|MIOS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.703857421875	2	506.705657	1011.39676	0.14844	7.5213E-05	-4.0427	-0.0020484	-3.8942	-0.0019732	506.70375791444656	32.425	0.42076	32.436	32.241	32.662	0.010899					19	11	2	0	0	0	0.76255	1	1822	1822		35.618	2.8059	1	60905	+		3445	21101	2212	2215	4027	4027					-0.10848222872914448
CAEAYLKH	8	Unmodified	_CAEAYLKH_					0	0	0			REV__nc|ENSG00000135476|Q14674-2|ESPL1	REV__nc|ENSG00000135476|Q14674-2|ESPL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.72540283203125	2	467.726195	933.437837	-1.0737	-0.00050218	-0.27654	-0.00012935	-1.3502	-0.00063153	467.72591085184155	62.432	1.4312	62.82	62.273	63.704	0.38779					65	32	3	0	0	0	0.90465	1	6714	6714		40.573	1.7665	1	686640	+		3446	19228	2213	2216	4028	4028					-0.03154417042799196
CAEVPEQKNY	10	Unmodified	_CAEVPEQKNY_					0	0	0		nc|ENSG00000257594|Q8N4A0-2|GALNT4;ENST00000547474.1_3_12:89916592-89919989:-|nuORF;ENSG00000257594|ENST00000529983|GALNT4	nc|ENSG00000257594|Q8N4A0-2|GALNT4	nc|ENSG00000257594|Q8N4A0-2|GALNT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.7679443359375	2	590.768788	1179.52302	-1.7809	-0.0010521	-1.074	-0.00063447	-2.8549	-0.0016866	590.7680215416999	53.66	0.60393	53.683	53.384	53.988	0.022541					31	15	3	0	0	0	0.37206	1	4725	4725		66.429	2.222	1	164490			3447	8907	2214	2217	4029	4029					-0.059557163676345226
CAFLILIF	8	Unmodified	_CAFLILIF_					0	0	0			REV__ENSG00000137860|ENST00000347644|SLC28A2	REV__ENSG00000137860|ENST00000347644|SLC28A2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	471.2425537109375	2	470.27225	938.529947	0.64448	0.00030308	-0.78081	-0.00036719	-0.13634	-6.4115E-05	470.27204581207155	86.579	2.1238	86.728	85.515	87.639	0.14902					61	49	3	0	0	0	0.4196	1	8400	8400		24.504	0	1	82434	+		3448	19419	2215	2218	4030	4030					0.058222930415240626
CAGLLPPPT	9	Unmodified	_CAGLLPPPT_					0	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.9180603027344	2	434.733489	867.452425	-0.32102	-0.00013956	3.2075	0.0013944	2.8865	0.0012549	434.73522369890253	26.697	0.49514	26.521	26.386	26.881	-0.17559					13	10	2	0	0	0	0.20789	1	1500	1500		18.324	3.4595	1	33382			3449	8803	2216	2219	4031	4031					0.013396551053460826
CAHLKKVVV	9	Unmodified	_CAHLKKVVV_					0	0	0			REV__chr6:132817061-132817450|32|31.91|0.25|7.02|+|0|RPS12,None|1	REV__chr6:132817061-132817450|32|31.91|0.25|7.02|+|0|RPS12,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.80340576171875	2	498.80478	995.595007	-0.49025	-0.00024454	-1.6444	-0.00082021	-2.1346	-0.0010648	498.8037935233339	49.549	1.6037	50.009	49.582	51.185	0.45983					103	38	4	0	0	0	0.7932	1	4889	4889		24.203	0	1	5854700	+		3450	15872	2217	2220	4032	4032					0.09703287567390362
CAILQIQS	8	Unmodified	_CAILQIQS_					0	0	0		ENSG00000243896|ENST00000641841|OR2A7;ENSG00000180658|ENST00000315453|OR2A4	ENSG00000243896|ENST00000641841|OR2A7	ENSG00000243896|ENST00000641841|OR2A7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2654724121094	2	438.236396	874.458238	0.20478	8.9744E-05	1.1172	0.00048961	1.322	0.00057935	438.235637642279	24.357	0.44798	23.975	23.837	24.285	-0.38178					10	9	2	0	0	0	0.4196	1	1162	1162		44.117	5.3107	1	12400			3451	7339	2218	2221	4033	4033					0.015987536170200656
CAILYYEF	8	Unmodified	_CAILYYEF_					0	0	0		chr1:172256345-172308728|16|19.06|0.0|20.86|+|0|TE_info:L1M5,L1M5_dup2687,L1,LINE,donor,-,172255742,172256345|None,DNM3|11	chr1:172256345-172308728|16|19.06|0.0|20.86|+|0|TE_info:L1M5,L1M5_dup2687,L1,LINE,donor,-,172255742,172256345|None,DNM3|11	chr1:172256345-172308728|16|19.06|0.0|20.86|+|0|TE_info:L1M5,L1M5_dup2687,L1,LINE,donor,-,172255742,172256345|None,DNM3|11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.23834228515625	2	511.238604	1020.46266	0.048272	2.4679E-05	0.50128	0.00025627	0.54955	0.00028095	511.2387137603172	51.185	0.92873	51.183	50.685	51.614	-0.0020447					42	27	2	0	0	0	0.9159	1	4378	4378		44.531	7.372	1	108680			3452	32	2219	2222	4034	4034					-0.046757819600770745
CAINLLRLH	9	Unmodified	_CAINLLRLH_					0	0	0			REV__nc|ENSG00000109756|Q9Y4G8|RAPGEF2	REV__nc|ENSG00000109756|Q9Y4G8|RAPGEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.806640625	2	526.805311	1051.59607	2.4511	0.0012913	1.6759	0.00088286	4.127	0.0021741	526.8063545435555	100.49	2.2675	100.83	100.38	102.64	0.34591					144	58	4	0	0	0	0.25826	1	12373	12373		68.485	13.72	1	37709000	+		3453	17771	2220	2223	4035	4035					0.07233501936298126
CAIYGTQRLFQ	11	Unmodified	_CAIYGTQRLFQ_					0	0	0		ENSG00000253649|ENST00000647727|PRSS51	ENSG00000253649|ENST00000647727|PRSS51	ENSG00000253649|ENST00000647727|PRSS51	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.88897705078125	3	433.888657	1298.64414	0.76766	0.00033308	-0.50065	-0.00021723	0.26701	0.00011585	433.888297847271	31.717	1.3706	31.824	31.205	32.575	0.10707					55	31	3	0	0	0	0.72374	1	2177	2177		27.644	0	1	305350			3454	8863	2221	2224	4036	4036					0.006765310656646761
CAKVAGLVL	9	Unmodified	_CAKVAGLVL_					0	0	0		nc|ENSG00000135931|Q7Z3E5-2|ARMC9;ENSG00000135931|ENST00000611582|ARMC9	nc|ENSG00000135931|Q7Z3E5-2|ARMC9	nc|ENSG00000135931|Q7Z3E5-2|ARMC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2654724121094	2	437.264956	872.515359	-0.37471	-0.00016385	2.1781	0.00095241	1.8034	0.00078857	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.7932	1	891	891		25.45	3.7478	1	970200			3455	4072	2222	2225	4037	4037					0.07400220893384812
CALHVGSI	8	Unmodified	_CALHVGSI_					0	0	0		ENST00000513036.5_1_4:24529438-24529501:-|nuORF	ENST00000513036.5_1_4:24529438-24529501:-|nuORF	ENST00000513036.5_1_4:24529438-24529501:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.23876953125	2	400.210181	798.405809	1.8897	0.00075629	2.6344	0.0010543	4.5241	0.0018106	400.212232988178	17.872	0.55206	17.389	17.192	17.744	-0.48256					16	11	3	0	0	0	0.4196	1	317	317		13.775	0	1	23700			3456	13044	2223	2226	4038	4038					-0.00145784725930298
CALLLLLL	8	Unmodified	_CALLLLLL_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2;REV__ENSG00000215644|ENST00000400723|GCGR	REV__ENSG00000054654|ENST00000555002|SYNE2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.28741455078125	2	436.2879	870.561247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.306	1	65.692	65.192	66.192	0.38615								0	0	0	0.2945	1	7087	7087		33.493	0	1		+		3457	16404;23689	2224	2227	4039	4039					0.12078866075637507
CALPVHSH	8	Unmodified	_CALPVHSH_					0	0	0			REV__nc|ENSG00000237693|A1A4Y4-3|IRGM	REV__nc|ENSG00000237693|A1A4Y4-3|IRGM	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	431.30523681640625	2	432.213255	862.411957	-1.4258	-0.00061626	-0.51159	-0.00022112	-1.9374	-0.00083738	432.21220052048375	76.604	1.0304	76.693	75.888	76.918	0.089363					67	36	3	0	0	0	0.4196	1	7149	7149		28.254	0	1	92443	+		3458	30228	2225	2228	4040	4040					-0.024752664944116987
CANGLRPL	8	Unmodified	_CANGLRPL_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2283630371094	2	422.228905	842.443257	-1.6467	-0.00069529	-0.40314	-0.00017022	-2.0498	-0.0008655	422.2286089277903	56.345	1.4516	56.345	54.998	56.45	0					98	47	3	0	0	0	0.85277	1	4829	4829		25.45	1.2474	1	495340			3459	688	2226	2229	4041	4041					0.015733065396602797
CANVYGSYQCY	11	Unmodified	_CANVYGSYQCY_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1;nc|ENSG00000077942|P23142-2|FBLN1;nc|ENSG00000077942|P23142-3|FBLN1;ENST00000476366.1_1_22:45937122-45946826:+|nuORF;CON__ENSEMBL:ENSBTAP00000016046	nc|ENSG00000077942|P23142-4|FBLN1;CON__ENSEMBL:ENSBTAP00000016046	CON__ENSEMBL:ENSBTAP00000016046	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	635.7432250976562	2	635.746998	1269.47944	0.52062	0.00033098	-4.0559	-0.0025785	-3.5353	-0.0022476	635.7443382974756	26.064	0.83999	26.109	25.795	26.635	0.045509					56	24	3	0	0	0	0.76322	1	1061	1061		19.104	0.84144	1	137630		+	3460	14782;564	2227	2230	4042	4042					-0.14451649136412925
CAPLLKVP	8	Unmodified	_CAPLLKVP_					0	0	0			REV__ENST00000409085.8_1_2:69769656-69769722:-|nuORF	REV__ENST00000409085.8_1_2:69769656-69769722:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.75634765625	2	420.754224	839.493896	0.5028	0.00021155	1.6757	0.00070504	2.1785	0.00091659	420.754847228136	20.716	1.1231	20.695	19.83	20.953	-0.020922					79	56	2	0	0	0	0.82464	1	491	491		21.702	1.2205	1	122120	+		3461	26331	2228	2231	4043	4043					0.06772835864671833
CAPLVRAL	8	Unmodified	_CAPLVRAL_					0	0	0			REV__ENST00000489730.1_1_1:6478935-6479280:-|nuORF	REV__ENST00000489730.1_1_1:6478935-6479280:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.751708984375	2	421.749473	841.484393	2.261	0.00095358	2.5621	0.0010806	4.8232	0.0020342	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.88915	1	7569	7569		35.201	5.3592	1	532850	+		3462	16587	2229	2232	4044	4044					0.057310675791541144
CAPLVRLVLLL	11	Unmodified	_CAPLVRLVLLL_					0	0	0			REV__nc|ENSG00000053747|Q16787-3|LAMA3	REV__nc|ENSG00000053747|Q16787-3|LAMA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9292907714844	3	403.929905	1208.76789	0.41682	0.00016837	-1.4098	-0.00056947	-0.99301	-0.00040111	403.92919444194524	46.164	0.84489	46.636	46.254	47.099	0.47139					60	20	4	0	0	0	0.78391	1	4342	4342		14.694	2.487	1	1771500	+		3463	16391	2230	2233	4045	4045					0.17185233903956032
CAQFSKLH	8	Unmodified	_CAQFSKLH_					0	0	0		ENSG00000133597|ENST00000072869|ADCK2	ENSG00000133597|ENST00000072869|ADCK2	ENSG00000133597|ENST00000072869|ADCK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.2338562011719	2	467.234187	932.453822	-0.11758	-5.4936E-05	-1.4524	-0.0006786	-1.5699	-0.00073353	467.2333042677725	68.306	1.2873	68.328	67.991	69.278	0.021599					130	57	3	0	0	0	0.92457	1	6473	6473		47.916	0	1	1529800			3464	3881	2231	2234	4046	4046					-0.015107108058941776
CARLALLG	8	Unmodified	_CARLALLG_					0	0	0			REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.73944091796875	2	408.741648	815.468743	-1.9297	-0.00078873	-2.8268	-0.0011554	-4.7564	-0.0019441	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.82464	1	2255	2255		21.702	0	1	521170	+		3465	20776	2232	2235	4047	4047					0.0536278106210375
CASSPEKIE	9	Unmodified	_CASSPEKIE_					0	0	0		ENSG00000164022|ENST00000672341|AIMP1;nc|ENSG00000164022|Q12904-2|AIMP1	ENSG00000164022|ENST00000672341|AIMP1	ENSG00000164022|ENST00000672341|AIMP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.2681884765625	2	482.226225	962.437897	-0.22439	-0.00010821	0.81539	0.0003932	0.591	0.00028499	482.2265058811966	31.701	0.91326	31.65	31.053	31.966	-0.051033					25	20	2	0	0	0	0.20789	1	1791	1791		26.693	9.3279	1	20430			3466	5901	2233	2236	4048	4048					-0.044824618334587285
CAVALWRREL	10	Unmodified	_CAVALWRREL_					0	0	0		nc|ENSG00000005206|Q8TCT7-4|SPPL2B;ENSG00000005206|ENST00000613503|SPPL2B;ENST00000589515.2_1_19:2343134-2351610:+|nuORF	nc|ENSG00000005206|Q8TCT7-4|SPPL2B	nc|ENSG00000005206|Q8TCT7-4|SPPL2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	608.8367309570312	2	608.8346	1215.65465	0.90898	0.00055342	3.5385	0.0021544	4.4475	0.0027078	608.8366424121912	110.3	0.86794	110.38	110.18	111.05	0.073685					55	25	4	0	0	0	0.85466	1	11872	11872		20.947	1.6843	1	2642000			3467	678	2234	2237	4049	4049					0.05544558510746356
CCAPQCCSG	9	Unmodified	_CCAPQCCSG_					0	0	0			REV__ENSG00000272804|ENST00000609664|KRTAP10-7	REV__ENSG00000272804|ENST00000609664|KRTAP10-7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.13134765625	2	436.131901	870.24925	0.27935	0.00012183	-0.26991	-0.00011771	0.0094394	4.1168E-06	436.1318015323301	28.796	1.7808	28.827	28.067	29.848	0.030947					112	61	2	0	0	0	0.7932	1	1473	1473		23.042	0	1	41453	+		3468	23988	2235	2238	4050	4050					-0.19106477274578992
CCAPYLPG	8	Unmodified	_CCAPYLPG_					0	0	0		ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.17578125	2	412.177492	822.340431	-0.18655	-7.6891E-05	-4.0617	-0.0016742	-4.2483	-0.001751	412.17579267785936	95.368	1.8182	95.435	94.838	96.656	0.066727					99	42	3	0	0	0	0.91333	1	9982	9982		43.626	15.744	1	1871100			3469	2216	2236	2239	4051	4051					-0.07784522243287029
CCAPYLPG	8	Unmodified	_CCAPYLPG_					0	0	0		ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.1757507324219	2	412.177492	822.340431	-1.8024	-0.00074289	-2.9753	-0.0012263	-4.7776	-0.0019692	412.1764055196895	94.607	2.9265	94.838	94.324	97.25	0.23103					168	69	5	0	0	0	0.88393	1	9708	9708		33.493	3.6514	1	14636000			3470	2216	2236	2239	4052	4052					-0.07784522243287029
CCCCFCEQKAQ	11	Unmodified	_CCCCFCEQKAQ_					0	0	0			REV__chr16:18784853-18788063|23|64.17|0.23|8.11|-|2|None,RPS15A|1	REV__chr16:18784853-18788063|23|64.17|0.23|8.11|-|2|None,RPS15A|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.217529296875	2	633.215639	1264.41673	0.2565	0.00016242	1.6653	0.0010545	1.9218	0.0012169	633.216575094084	29.451	0.55871	29.481	29.209	29.768	0.030945					29	17	2	0	0	0	0.78986	1	1457	1457		13.454	0.64233	1	64430	+		3471	15628	2237	2240	4053	4053					-0.2049057779213399
CCCGFDFGQC	10	Unmodified	_CCCGFDFGQC_					0	0	0		ENST00000256367.2_1_14:71137928-71138198:+|nuORF	ENST00000256367.2_1_14:71137928-71138198:+|nuORF	ENST00000256367.2_1_14:71137928-71138198:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.733642578125	2	541.663566	1081.31258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.951	1	26.979	26.479	27.479	0.02817								0	0	0	0.45132	1	1054	1054		10.265	1.4429	1				3472	9337	2238	2241	4054	4054					-0.2248253655732242
CCCIGKDD	8	Unmodified	_CCCIGKDD_					0	0	0		nc|ENSG00000164535|Q8NCG7-3|DAGLB;ENSG00000164535|ENST00000297056|DAGLB	nc|ENSG00000164535|Q8NCG7-3|DAGLB	nc|ENSG00000164535|Q8NCG7-3|DAGLB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.26165771484375	2	428.653524	855.292495	-1.6599	-0.0007115	1.0924	0.00046824	-0.5675	-0.00024326	428.65524989691386	90.628	0.11752	90.845	90.787	90.905	0.21736					4	2	2	0	0	0	0.4196	1	9100	9100		18.324	8.8539	1	37229			3473	5974	2239	2242	4055	4055					-0.14093964225662603
CCCSHPCC	8	Unmodified	_CCCSHPCC_					0	0	0			REV__ENSG00000143195|ENST00000271417|ILDR2	REV__ENSG00000143195|ENST00000271417|ILDR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.261474609375	2	428.107372	854.200191	-1.8504	-0.00079215	-2.5925	-0.0011099	-4.4429	-0.001902	428.10622073540156	90.663	0.19849	90.843	90.72	90.919	0.18029					5	4	2	0	0	0	0.4196	1	9045	9045		4.6817	3.0627	1	15330	+		3474	19781	2240	2243	4056	4056					-0.23274088835194107
CCEPESETEPE	11	Unmodified	_CCEPESETEPE_					0	0	0			REV__nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	REV__nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.72314453125	2	626.720843	1251.42713	-0.18956	-0.0001188	-1.2458	-0.00078078	-1.4354	-0.00089958	626.7200818514914	23.555	0.60053	23.503	23.311	23.912	-0.052114					31	17	3	0	0	0	0.78658	1	850	850		14.137	0.68308	1	45701	+		3475	16892	2241	2244	4057	4057					-0.18852277060705092
CCFAVITAM	9	Oxidation (M)	_CCFAVITAM(Oxidation (M))_		CCFAVITAM(1)		CCFAVITAM(48)	0	0	1			REV__nc|ENSG00000149571|Q8IZU9-2|KIRREL3	REV__nc|ENSG00000149571|Q8IZU9-2|KIRREL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7081604003906	2	487.710842	973.407131	-2.5327	-0.0012352	-1.7802	-0.00086824	-4.313	-0.0021035	487.70987427828743	64.75	0.60141	64.777	64.593	65.195	0.027138					21	16	2	0	0	0	0.58151	1	6121	6121		47.916	10.756	1	114670	+		3476	20179	2242	2245	4058	4058		302			-0.08063654743705229
CCFAVITAM	9	Oxidation (M)	_CCFAVITAM(Oxidation (M))_					0	0	1			REV__nc|ENSG00000149571|Q8IZU9-2|KIRREL3	REV__nc|ENSG00000149571|Q8IZU9-2|KIRREL3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	487.710842	973.407131	-2.5327	-0.0012352	-1.7802	-0.00086824	-4.313	-0.0021035	487.70987427828743	64.75	0.60141	64.777	64.593	65.195	0.027138	-0.11982	0.0015392	NaN	47.916	21	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114670	+		3477	20179	2242	2245				302			-0.08063654743705229
CCFCCCCCFC	10	Unmodified	_CCFCCCCCFC_					0	0	0		ENSG00000163793|ENST00000296097|DNAJC5G	REV__ENSG00000163793|ENST00000296097|DNAJC5G	REV__ENSG00000163793|ENST00000296097|DNAJC5G	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.1188354492188	2	569.117711	1136.22087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.606	1	28.606	28.106	29.106	0								0	0	0	0.45132	1	1203	1203		1.0954	0	1				3478	5864	2243	2246	4059	4059					-0.34179325833702023
CCFLTSAVTH	10	Unmodified	_CCFLTSAVTH_					0	0	0		ENST00000394628.2_1_10:79492006-79493143:+|nuORF	ENST00000394628.2_1_10:79492006-79493143:+|nuORF	ENST00000394628.2_1_10:79492006-79493143:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.242431640625	2	541.243895	1080.47324	0.52671	0.00028508	-3.6565	-0.001979	-3.1297	-0.001694	541.2418064264428	20.876	0.50395	20.812	20.611	21.115	-0.064743					29	20	2	0	0	0	0.8608	1	563	563		34.173	1.3601	1	43838			3479	11071	2244	2247	4060	4060					-0.06378122577302747
CCPPECWCRN	10	Unmodified	_CCPPECWCRN_					0	0	0		ENST00000524846.5_1_8:144643499-144644514:+|nuORF	ENST00000524846.5_1_8:144643499-144644514:+|nuORF	ENST00000524846.5_1_8:144643499-144644514:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.7154541015625	2	605.716664	1209.41877	0.2474	0.00014986	-1.6764	-0.0010154	-1.429	-0.00086559	605.715503707981	27.833	0.59239	27.944	27.574	28.167	0.11117					46	29	2	0	0	0	0.85251	1	1123	1123		19.997	2.6318	1	146890			3480	13226	2245	2248	4061	4061					-0.17755780992024484
CCRRRRARLRF	11	Unmodified	_CCRRRRARLRF_					0	0	0		ENSG00000254126|ENST00000643224|CD8B2;ENSG00000172116|ENST00000390655|CD8B;nc|ENSG00000172116|P10966-2|CD8B;nc|ENSG00000172116|P10966-6|CD8B;nc|ENSG00000172116|P10966-4|CD8B	ENSG00000254126|ENST00000643224|CD8B2	ENSG00000254126|ENST00000643224|CD8B2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.6162414550781	3	498.28234	1491.82519	0.32624	0.00016256	0.39577	0.00019721	0.72201	0.00035977	498.28263458981064	33.289	0.68958	33.256	32.916	33.606	-0.032677					52	31	2	0	0	0	0.76579	1	1590	1590		18.531	1.8137	1	223550			3481	8873	2246	2249	4062	4062					0.09895190681231725
CCVSLHYLVL	10	Unmodified	_CCVSLHYLVL_					0	0	0			REV__ENSG00000112511|ENST00000374516|PHF1	REV__ENSG00000112511|ENST00000374516|PHF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.2866821289062	2	575.293388	1148.57222	-0.38737	-0.00022285	-1.4661	-0.00084343	-1.8535	-0.0010663	575.2938552163392	76.272	2.3519	76.672	75.494	77.846	0.3997					143	62	4	0	0	0	0.86452	1	8580	8580		30.504	1.3336	1	1387300	+		3482	17949	2247	2250	4063	4063					0.003879003875908893
CCVSLHYLVL	10	Unmodified	_CCVSLHYLVL_					0	0	0			REV__ENSG00000112511|ENST00000374516|PHF1	REV__ENSG00000112511|ENST00000374516|PHF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2987670898438	2	575.293388	1148.57222	-0.40049	-0.0002304	-1.7178	-0.00098825	-2.1183	-0.0012186	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.67608	1	8575	8575		45.952	1.8352	1	1396200	+		3483	17949	2247	2250	4064	4064					0.003879003875908893
CCWTSHEEE	9	Carbamidomethyl (C)	_C(Carbamidomethyl (C))CWTSHEEE_	C(0.972)C(0.028)WTSHEEE		C(15)C(-15)WTSHEEE		0	1	0		ENST00000412898.5_3_22:25006393-25007149:+|nuORF	ENST00000412898.5_3_22:25006393-25007149:+|nuORF	ENST00000412898.5_3_22:25006393-25007149:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.7056274414062	2	590.705331	1179.39611	0.89565	0.00052907	-2.6151	-0.0015448	-1.7195	-0.0010157	590.703647311871	25.698	0.76314	25.722	25.369	26.132	0.024021					58	36	2	0	0	0	0.62081	1	943	943		45.952	16.802	2	107850			3484	11342	2248	2251	4065	4065	144				-0.1864138558430568
CDAGLFLKY	9	Unmodified	_CDAGLFLKY_					0	0	0			REV__ENSG00000160796|ENST00000450053|NBEAL2	REV__ENSG00000160796|ENST00000450053|NBEAL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.25830078125	2	515.257328	1028.5001	0.17955	9.2515E-05	3.7434	0.0019288	3.9229	0.0020213	515.2590970344206	30.802	0.50757	30.792	30.585	31.093	-0.010656					23	12	2	0	0	0	0.76996	1	1643	1643		33.516	0.76505	1	53048	+		3485	20741	2249	2252	4066	4066					-0.013006906944610819
CDCYTSGGC	9	Unmodified	_CDCYTSGGC_					0	0	0			REV__ENST00000483805.1_1_5:137501718-137501781:-|nuORF	REV__ENST00000483805.1_1_5:137501718-137501781:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7552490234375	2	454.632788	907.251024	-1.288	-0.00058555	-1.6388	-0.00074507	-2.9268	-0.0013306	454.6332864965526	44.538	1.8703	45.001	44.578	46.449	0.46313					118	45	4	0	0	0	0.20789	1	4275	4275		11.511	0	1	15269000	+		3486	27499	2250	2253	4067	4067					-0.20631144984963612
CDDLKELPEPT	11	Unmodified	_CDDLKELPEPT_					0	0	0		ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.798583984375	2	630.294836	1258.57512	1.2871	0.00081123	2.0747	0.0013077	3.3618	0.0021189	630.2960473873329	23.81	0.6923	23.863	23.602	24.294	0.05291					51	30	2	0	0	0	0.60058	1	802	802		44.377	10.456	1	159760			3487	8294	2251	2254	4068	4068					-0.04382597744552186
CDEHGYPDSP	10	Unmodified	_CDEHGYPDSP_					0	0	0			REV__ENSG00000184374|ENST00000332843|COLEC10	REV__ENSG00000184374|ENST00000332843|COLEC10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.34033203125	2	560.206021	1118.39749	-1.1144	-0.00062428	2.5269	0.0014156	1.4126	0.00079133	560.2085126222843	102.34	0.24018	102.36	102.24	102.48	0.01989					6	5	2	0	0	0	0.37624	1	10950	10950		42.396	13.247	1	56746	+		3488	22670	2252	2255	4069	4069					-0.1569742822389344
CDEKFLSKL	9	Unmodified	_CDEKFLSKL_					0	0	0			REV__ENSG00000117148|ENST00000375406|ACTL8	REV__ENSG00000117148|ENST00000375406|ACTL8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.7796630859375	2	541.781167	1081.54778	-0.26373	-0.00014288	-2.7354	-0.001482	-2.9991	-0.0016249	541.7795266795115	62.674	1.2689	63.228	62.82	64.089	0.5545					70	29	4	0	0	0	0.030919	1	6746	6746		117.81	2.9165	1	1704100	+		3489	18248	2253	2256	4070	4070					0.010269635057284177
CDPEKEASC	9	Unmodified	_CDPEKEASC_					0	0	0		ENSG00000156869|ENST00000646001|FRRS1;nc|ENSG00000156869|Q6ZNA5-2|FRRS1	ENSG00000156869|ENST00000646001|FRRS1	ENSG00000156869|ENST00000646001|FRRS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.18603515625	2	491.186242	980.357932	-0.16814	-8.2586E-05	-1.4334	-0.00070408	-1.6016	-0.00078667	491.18544321590446	64.613	1.5883	64.579	63.461	65.049	-0.034256					90	46	2	0	0	0	0.76764	1	6140	6140		34.173	7.4796	1	131650			3490	5397	2254	2257	4071	4071					-0.13303271498955382
CDPVIERRPR	10	Unmodified	_CDPVIERRPR_					0	0	0		ENSG00000160447|ENST00000291906|PKN3;ENST00000483521.1_1_9:131475404-131482989:+|nuORF	ENSG00000160447|ENST00000291906|PKN3;ENST00000483521.1_1_9:131475404-131482989:+|nuORF	ENSG00000160447|ENST00000291906|PKN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.83447265625	2	620.832588	1239.65062	0.34747	0.00021572	-1.5936	-0.00098937	-1.2461	-0.00077364	620.831501884774	61.24	0.7449	61.794	61.511	62.256	0.55386					46	19	3	0	0	0	0.3985	1	6554	6554		64.207	5.9773	1	675170			3491	5589;12516	2255	2258	4072	4072					0.040384690170412796
CDRDSRCNLAL	11	Unmodified	_CDRDSRCNLAL_					0	0	0		ENSG00000180447|ENST00000298743|GAS1	ENSG00000180447|ENST00000298743|GAS1	ENSG00000180447|ENST00000298743|GAS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.2919921875	2	633.289896	1264.56524	0.32515	0.00020591	2.246	0.0014224	2.5712	0.0016283	633.2913803529098	33.397	0.57442	33.507	33.248	33.823	0.10991					37	22	2	0	0	0	0.72739	1	1630	1630		27.047	4.4677	1	140050			3492	7330	2256	2259	4073	4073					-0.056460642309048126
CDTFRAGA	8	Unmodified	_CDTFRAGA_					0	0	0		nc|ENSG00000182934|P08240-2|SRPRA;ENSG00000182934|ENST00000332118|SRPRA	nc|ENSG00000182934|P08240-2|SRPRA	nc|ENSG00000182934|P08240-2|SRPRA	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.6872863769531	2	420.68707	839.359587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.47	1	28.447	27.947	28.947	-0.023556								0	0	0	0.29596	1	1371	1371		35.618	2.1027	1				3493	7484	2257	2260	4074	4074					-0.06651849628030959
CEARDALLSQ	10	Unmodified	_CEARDALLSQ_					0	0	0		nc|ENSG00000273777|Q6UY09-4|CEACAM20;nc|ENSG00000273777|Q6UY09-3|CEACAM20;nc|ENSG00000273777|Q6UY09-2|CEACAM20;nc|ENSG00000273777|Q6UY09-5|CEACAM20;ENSG00000273777|ENST00000614924|CEACAM20	nc|ENSG00000273777|Q6UY09-4|CEACAM20	nc|ENSG00000273777|Q6UY09-4|CEACAM20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.26708984375	2	553.268955	1104.52336	-0.82693	-0.00045751	-2.3659	-0.001309	-3.1928	-0.0017665	553.2675507536138	27.578	0.87235	27.481	27.139	28.011	-0.096947					39	19	3	0	0	0	0.27582	1	1609	1609		75.043	10.836	1	447490			3494	8989	2258	2261	4075	4075					-0.02472296647783878
CEDIGVAH	8	Unmodified	_CEDIGVAH_					0	0	0		nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L;ENSG00000103494|ENST00000647211|RPGRIP1L	nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.189453125	2	422.186903	842.359253	2.1271	0.00089804	2.7151	0.0011463	4.8422	0.0020443	422.1879436838742	103.41	0.96365	103.64	103.27	104.23	0.22555					42	23	2	0	0	0	0.92176	1	12594	12594		46.766	0	1	1970500			3495	2085	2259	2262	4076	4076					-0.06823269347876249
CEEEGDEGE	9	Unmodified	_CEEEGDEGE_					0	0	0		ENSG00000158545|ENST00000301011|ZC3H18	ENSG00000158545|ENST00000301011|ZC3H18	ENSG00000158545|ENST00000301011|ZC3H18	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.6554870605469	2	498.658569	995.302585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.678	1	50.655	50.155	51.155	-0.02343								0	0	0	0.33676	1	4401	4401		18.324	5.3652	1				3496	5486	2260	2263	4077	4077					-0.19525406485718122
CEFCGRAFS	9	Unmodified	_CEFCGRAFS_					0	0	0		nc|ENSG00000148143|Q96JM2-3|ZNF462;ENSG00000148143|ENST00000277225|ZNF462;nc|ENSG00000148143|Q96JM2-2|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.2023010253906	2	510.207312	1018.40007	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.415	1	18.338	17.838	18.838	-0.07671								0	0	0	0.31117	1	302	302		26.693	4.733	1				3497	4934	2261	2264	4078	4078					-0.10839251299910302
CEGFEPCKGDW	11	Unmodified	_CEGFEPCKGDW_					0	0	0		nc|ENSG00000073146|Q9BXT6-5|MOV10L1;nc|ENSG00000073146|Q9BXT6-4|MOV10L1;ENSG00000073146|ENST00000262794|MOV10L1	nc|ENSG00000073146|Q9BXT6-5|MOV10L1	nc|ENSG00000073146|Q9BXT6-5|MOV10L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	635.7442016601562	2	635.746998	1269.47944	-0.29339	-0.00018652	-3.3074	-0.0021026	-3.6008	-0.0022892	635.7448049611166	26.505	1.2881	26.466	26.017	27.305	-0.038523					56	29	3	0	0	0	0.76322	1	1212	1212		19.104	0.84144	1	171400			3498	1288	2262	2265	4079	4079					-0.14451649136412925
CEGRGSCN	8	Unmodified	_CEGRGSCN_					0	0	0			REV__nc|ENSG00000088812|O75882-3|ATRN	REV__nc|ENSG00000088812|O75882-3|ATRN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1938171386719	2	413.152537	824.290521	0.096921	4.0043E-05	-2.9632	-0.0012243	-2.8663	-0.0011842	413.1512770135462	83.418	0.4647	83.874	83.767	84.232	0.45555					12	10	2	0	0	0	0.4196	1	9726	9726		25.574	14.063	1	50190	+		3499	16947	2263	2266	4080	4080					-0.12865256919235435
CEKRQKRIPG	10	Unmodified	_CEKRQKRIPG_					0	0	0			REV__ENST00000407426.7_1_2:29137071-29140818:+|nuORF	REV__ENST00000407426.7_1_2:29137071-29140818:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5647888183594	3	405.564396	1213.67136	-1.5366	-0.00062318	2.6418	0.0010714	1.1052	0.00044823	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.86763	1	5602	5602		19.263	0	1	187890	+		3500	26318	2264	2267	4081	4081					0.07307059396703153
CEKRQKRIPG	10	Unmodified	_CEKRQKRIPG_					0	0	0			REV__ENST00000407426.7_1_2:29137071-29140818:+|nuORF	REV__ENST00000407426.7_1_2:29137071-29140818:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.565185546875	3	405.564396	1213.67136	-1.8603	-0.00075448	2.8015	0.0011362	0.94123	0.00038173	405.5653949658049	63.143	1.4987	63.257	62.721	64.22	0.11388					139	74	3	0	0	0	0.86763	1	5521	5521		19.263	0	1	273590	+		3501	26318	2264	2267	4082	4082					0.07307059396703153
CELFVCSKF	9	Unmodified	_CELFVCSKF_					0	0	0			REV__ENSG00000090432|ENST00000264198|MUL1	REV__ENSG00000090432|ENST00000264198|MUL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7850952148438	2	538.251188	1074.48782	-0.62002	-0.00033372	0.38928	0.00020953	-0.23074	-0.00012419	538.2511566179562	67.716	0.54217	68.264	68.117	68.659	0.54819					18	12	2	0	0	0	0.20789	1	7492	7492		18.262	0	1	161030	+		3502	16986	2265	2268	4083	4083					-0.04644050429146773
CELPCQDGTY	10	Unmodified	_CELPCQDGTY_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10;nc|ENSG00000145794|Q96KG7-2|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	564.7237548828125	2	564.720449	1127.42635	0.36992	0.0002089	2.5048	0.0014145	2.8747	0.0016234	564.7219030272195	51.148	0.9402	51.182	50.611	51.551	0.034584					57	27	4	0	0	0	0.74274	1	4086	4086		42.396	8.2236	1	659470			3503	4793	2266	2269	4084	4084					-0.1322702691907125
CEVCSDGDDE	10	Unmodified	_CEVCSDGDDE_					0	0	0			REV__ENSG00000278311|ENST00000613102|GGNBP2	REV__ENSG00000278311|ENST00000613102|GGNBP2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.1634521484375	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.346	1	25.37	24.87	25.87	0.024021								0	0	0	0.45132	1	913	913		9.7057	2.5123	1		+		3504	24034	2267	2270	4085	4085					-0.21549077329109423
CEVNDLLIPGR	11	Unmodified	_CEVNDLLIPGR_					0	0	0			REV__nc|ENSG00000146700|Q8WTU2-2|SSC4D	REV__nc|ENSG00000146700|Q8WTU2-2|SSC4D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	614.348388671875	2	614.821355	1227.62816	-0.24345	-0.00014968	0.32992	0.00020284	0.086475	5.3167E-05	614.8216874166059	71.257	1.3712	71.642	71.126	72.497	0.38449					42	32	2	0	0	0	0.17347	1	7862	7862		29.17	3.596	1	274440	+		3505	20027	2268	2271	4086	4086					0.02344824828765013
CEVQEGGSPAE	11	Unmodified	_CEVQEGGSPAE_					0	0	0		ENST00000590501.5_3_18:11902269-11906227:-|nuORF	ENST00000590501.5_3_18:11902269-11906227:-|nuORF	ENST00000590501.5_3_18:11902269-11906227:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.224853515625	2	553.226953	1104.43935	0.29822	0.00016498	-3.8558	-0.0021331	-3.5575	-0.0019681	553.2247748985499	30.545	0.56795	30.498	30.274	30.842	-0.047064					23	14	2	0	0	0	0.732	1	1686	1686		26.063	4.1035	1	54039			3506	14258	2269	2272	4087	4087					-0.10868872535343144
CFAFVHDVCDD	11	Unmodified	_CFAFVHDVCDD_					0	0	0		ENST00000438609.5_1_2:172180771-172195744:-|nuORF;ENST00000428182.2_1_12:15408356-15408710:-|nuORF;nc|ENSG00000123600|Q9H825-2|METTL8;nc|ENSG00000123600|Q9H825|METTL8;ENSG00000123600|ENST00000375258|METTL8	ENST00000438609.5_1_2:172180771-172195744:-|nuORF	ENST00000438609.5_1_2:172180771-172195744:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	635.7530517578125	2	635.746998	1269.47944	1.0211	0.00064916	-4.4113	-0.0028045	-3.3902	-0.0021553	635.7441604867082	26.262	0.45121	26.291	26.136	26.587	0.02817					37	19	2	0	0	0	0.7342	1	1009	1009		25.574	3.8883	1	104690			3507	11753	2270	2273	4088	4088					-0.14451649136435663
CFCFCFCRS	9	Unmodified	_CFCFCFCRS_					0	0	0		ENST00000373115.4_1_10:73769153-73769792:+|nuORF	ENST00000373115.4_1_10:73769153-73769792:+|nuORF	ENST00000373115.4_1_10:73769153-73769792:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.44873046875	2	558.200118	1114.38568	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.65	1	19.58	19.08	20.08	-0.070013								0	0	0	0.30053	1	444	444		30.504	8.5438	1				3508	10732	2271	2274	4089	4089					-0.1669336304407807
CFCSSFLPTY	10	Unmodified	_CFCSSFLPTY_					0	0	0		ENST00000554157.5_1_14:20757788-20760378:-|nuORF	ENST00000554157.5_1_14:20757788-20760378:-|nuORF	ENST00000554157.5_1_14:20757788-20760378:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.239990234375	2	584.246103	1166.47765	-0.91096	-0.00053223	-2.7888	-0.0016293	-3.6998	-0.0021616	584.2443398968256	59.966	1.1406	60.519	60.119	61.26	0.55323					79	30	3	0	0	0	0.86589	1	6466	6466		29.15	2.4566	1	4658100			3509	13716	2272	2275	4090	4090					-0.09892658154399214
CFEGLLFL	8	Unmodified	_CFEGLLFL_					0	0	0		ENST00000479314.1_1_3:44968183-44974766:-|nuORF;ENSG00000163812|ENST00000424952|ZDHHC3;nc|ENSG00000163812|Q9NYG2-2|ZDHHC3	ENST00000479314.1_1_3:44968183-44974766:-|nuORF	ENST00000479314.1_1_3:44968183-44974766:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	471.2409362792969	2	471.243689	940.472826	0.64062	0.00030189	-0.52929	-0.00024942	0.11134	5.2467E-05	471.2433603925791	85.886	4.3657	86.035	83.833	88.198	0.14884					167	101	2	0	0	0	0.90024	1	8412	8412		39.021	0	1	231870			3510	5868	2273	2276	4091	4091					0.0002082576515931578
CFFLMKLLL	9	Unmodified	_CFFLMKLLL_					0	0	0		ENST00000356218.8_1_14:51955989-52156529:+|nuORF	ENST00000356218.8_1_14:51955989-52156529:+|nuORF	ENST00000356218.8_1_14:51955989-52156529:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.3142700195312	2	564.321417	1126.62828	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.106	1	57.078	56.578	57.578	-0.02866								0	0	0	0.30672	1	5254	5254		28.254	3.7351	1				3511	10360	2274	2277	4092	4092					0.0700315329509067
CFLQHINPK	9	Unmodified	_CFLQHINPK_					0	0	0		ENSG00000205108|ENST00000378788|FAM205A	ENSG00000205108|ENST00000378788|FAM205A	ENSG00000205108|ENST00000378788|FAM205A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.2869262695312	2	550.289494	1098.56443	0.39664	0.00021827	-4.1537	-0.0022857	-3.7571	-0.0020675	550.2870812764359	90.364	0.93704	90.815	90.528	91.465	0.45058					59	22	4	0	0	0	0.43338	1	10710	10710		55.504	2.5675	1	2468700			3512	8511	2275	2278	4093	4093					0.019095091823373878
CFLRIPILIKK	11	Unmodified	_CFLRIPILIKK_					0	0	0		ENST00000539909.5_1_10:76468199-76468310:+|nuORF	ENST00000539909.5_1_10:76468199-76468310:+|nuORF	ENST00000539909.5_1_10:76468199-76468310:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.6222229003906	3	448.624704	1342.85228	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.254	1	65.379	64.879	65.879	0.12545								0	0	0	0.56276	1	5781	5781		19.263	0.73163	1				3513	13486	2276	2279	4094	4094					0.1945718472070439
CFLSGTYCCND	11	Unmodified	_CFLSGTYCCND_					0	0	0			REV__ENSG00000174898|ENST00000381624|CATSPERD	REV__ENSG00000174898|ENST00000381624|CATSPERD	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.9389953613281	3	409.148932	1224.42497	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.011	1	17.057	16.557	17.557	0.0457								0	0	0	0.56276	1	211	211		21.032	0.19508	1		+		3514	22022	2277	2280	4095	4095					-0.17826984279508906
CFMNNIFSY	9	Unmodified	_CFMNNIFSY_					0	0	0		nc|ENSG00000250120|Q9Y5I2-3|PCDHA10	nc|ENSG00000250120|Q9Y5I2-3|PCDHA10	nc|ENSG00000250120|Q9Y5I2-3|PCDHA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.73779296875	2	569.738445	1137.46234	0.49785	0.00028364	-1.4771	-0.00084154	-0.97921	-0.00055789	569.7375632765535	59.388	0.55659	59.502	59.284	59.84	0.11396					27	15	3	0	0	0	0.51307	1	5088	5088		51.335	10.557	1	252520			3515	15288	2278	2281	4096	4096					-0.10089524951581552
CFPCQTLMIED	11	Unmodified	_CFPCQTLMIED_					0	0	0			REV__ENST00000413848.1_1_2:201827991-201873805:+|nuORF	REV__ENST00000413848.1_1_2:201827991-201873805:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.2550964355469	3	433.852115	1298.53452	4.8104	0.002087	1.4427	0.00062594	6.2531	0.0027129	434.187838589863	107.05	0.41006	107.2	106.99	107.4	0.14929					18	11	3	0	0	0	0.17273	1	13117	13117		43.651	2.5707	1	193820	+		3516	26399	2279	2282	4097	4097					-0.10280978660171058
CFPLISLIL	9	Unmodified	_CFPLISLIL_					0	0	0		nc|ENSG00000197121|Q75T13-2|PGAP1;ENSG00000197121|ENST00000354764|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8041687011719	2	509.803914	1017.59328	0.79945	0.00040756	-0.42739	-0.00021788	0.37206	0.00018968	509.8035075360295	99.292	1.0934	99.448	99.074	100.17	0.15659					54	25	3	0	0	0	0.78851	1	10331	10331		28.254	1.4582	1	232530			3517	8136	2280	2283	4098	4098					0.08518233758786664
CFPRCGSR	8	Carbamidomethyl (C)	_C(Carbamidomethyl (C))FPRCGSR_	C(0.996)FPRC(0.004)GSR		C(24)FPRC(-24)GSR		0	1	0			REV__nc|ENSG00000178950|O14976-2|GAK	REV__nc|ENSG00000178950|O14976-2|GAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.72064208984375	2	491.720921	981.427289	0.33071	0.00016262	-1.0682	-0.00052524	-0.73746	-0.00036263	491.72029450634733	20.64	0.62511	20.181	19.915	20.54	-0.4591					23	14	2	0	0	0	0.91005	1	666	666		42.474	10.52	2	132540	+		3518	22302	2281	2284	4099	4099	271				-0.06416722968856448
CFRKERLHRKL	11	Unmodified	_CFRKERLHRKL_					0	0	0			REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337	REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.958740234375	3	495.957628	1484.85106	1.2158	0.00060298	0.76165	0.00037775	1.9774	0.00098073	495.9579229143924	102.13	1.1478	102.39	101.73	102.88	0.26322					71	28	3	0	0	0	0.75121	1	12443	12443		21.78	8.2725	1	308830	+		3519	18890	2282	2285	4100	4100					0.1280236340448937
CFRKERLHRKL	11	Unmodified	_CFRKERLHRKL_					0	0	0			REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337	REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	495.957628	1484.85106	-0.55481	-0.00027516	2.7881	0.0013828	2.2333	0.0011076	495.9589612829652	102.47	1.4778	102.51	101.59	103.07	0.043198	-0.097367	0.0012292	NaN	21.78	96	35	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	395240	+		3520	18890	2282	2285							0.1280236340448937
CFRKERLHRKL	11	Unmodified	_CFRKERLHRKL_					0	0	0			REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337	REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	495.957628	1484.85106	-1.6281	-0.00080749	3.8211	0.0018951	2.193	0.0010876	495.9594624164535	102.46	1.3044	102.6	101.71	103.02	0.13569	-0.011069	0.0027663	NaN	21.78	94	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	430300	+		3521	18890	2282	2285							0.1280236340448937
CFRKERLHRKL	11	Unmodified	_CFRKERLHRKL_					0	0	0			REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337	REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	495.957628	1484.85106	1.2158	0.00060298	0.76165	0.00037775	1.9774	0.00098073	495.9579229143924	102.13	1.1478	102.39	101.73	102.88	0.26322	-0.22221	-0.0017858	NaN	21.78	71	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	308830	+		3522	18890	2282	2285							0.1280236340448937
CFRTEGNLIK	10	Unmodified	_CFRTEGNLIK_					0	0	0		ENST00000427814.5_1_7:27870244-27870370:-|nuORF	ENST00000427814.5_1_7:27870244-27870370:-|nuORF	ENST00000427814.5_1_7:27870244-27870370:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8096313476562	2	590.81079	1179.60703	-0.32322	-0.00019096	-2.5449	-0.0015035	-2.8681	-0.0016945	590.8092533729065	59.928	1.5542	59.928	59.528	61.083	0.00051117					123	53	3	0	0	0	0.30722	1	5221	5221		71.877	3.0906	1	4758100			3523	11583	2283	2286	4101	4101					0.024408595199020056
CFSAIVLH	8	Unmodified	_CFSAIVLH_					0	0	0			REV__nc|ENSG00000185792|Q7RTR0-2|NLRP9	REV__nc|ENSG00000185792|Q7RTR0-2|NLRP9	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	444.2457275390625	2	445.233656	888.452759	-0.96161	-0.00042814	0.22167	9.8697E-05	-0.73994	-0.00032945	445.2336242278391	107.19	0.67893	107.19	106.89	107.57	0					19	15	2	0	0	0	0.4196	1	11146	11146		21.702	12.519	1	61025	+		3524	22792	2284	2287	4102	4102					0.004070748252047451
CFSVALGAW	9	Unmodified	_CFSVALGAW_					0	0	0		ENST00000409863.5_1_7:24873782-24873917:-|nuORF	ENST00000409863.5_1_7:24873782-24873917:-|nuORF	ENST00000409863.5_1_7:24873782-24873917:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7355041503906	2	477.231113	952.447674	-0.96053	-0.00045839	4.4797	0.0021379	3.5192	0.0016795	477.23284916044145	65.771	0.54585	66.324	66.125	66.671	0.5526					27	14	3	0	0	0	0.5393	1	7192	7192		50.025	2.065	1	353370			3525	11317	2285	2288	4103	4103					-0.03045229037422814
CFTPHTEEGCL	11	Unmodified	_CFTPHTEEGCL_					0	0	0		ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	618.7509765625	2	618.754824	1235.49509	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.55	1	55.614	55.114	56.114	0.063725								0	0	0	0.56276	1	4656	4656		26.693	4.733	1				3526	6518	2286	2289	4104	4104					-0.11323362619373256
CFVLEGTG	8	Unmodified	_CFVLEGTG_					0	0	0		ENST00000412918.1_1_1:226862643-226862754:-|nuORF	ENST00000412918.1_1_1:226862643-226862754:-|nuORF	ENST00000412918.1_1_1:226862643-226862754:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.1945495605469	2	413.194196	824.37384	-1.7624	-0.00072821	-0.23098	-9.5439E-05	-1.9934	-0.00082365	413.19417749191615	83.551	1.9743	83.689	82.638	84.612	0.13811					89	45	3	0	0	0	0.85277	1	8057	8057		25.45	3.7478	1	313770			3527	11344	2287	2290	4105	4105					-0.04537197199726961
CFVVKKKVMTT	11	Unmodified	_CFVVKKKVMTT_					0	0	0			REV__nc|ENSG00000142230|Q9UBE0-2|SAE1	REV__nc|ENSG00000142230|Q9UBE0-2|SAE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.3638916015625	2	642.364344	1282.71414	-1.1506	-0.00073908	-1.4032	-0.00090137	-2.5538	-0.0016405	642.3639567174044	110.02	1.5274	110.03	109.72	111.24	0.0060425					172	55	4	0	0	0	0.63176	1	11727	11727		40.778	1.5253	1	1394500	+		3528	19732	2288	2291	4106	4106					0.08408693409933221
CFVVKKKVMTT	11	Unmodified	_CFVVKKKVMTT_					0	0	0			REV__nc|ENSG00000142230|Q9UBE0-2|SAE1	REV__nc|ENSG00000142230|Q9UBE0-2|SAE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3636474609375	2	642.364344	1282.71414	2.0845	0.001339	-3.9233	-0.0025202	-1.8388	-0.0011812	642.361819653108	110.23	1.6844	110.29	109.66	111.35	0.054062					109	58	2	0	0	0	0.58425	1	13305	13305		45.972	3.5761	1	2848100	+		3529	19732	2288	2291	4107	4107					0.08408693409933221
CGCAGWGVC	9	Unmodified	_CGCAGWGVC_					0	0	0		ENST00000348035.8_1_7:6442739-6442802:+|nuORF	ENST00000348035.8_1_7:6442739-6442802:+|nuORF	ENST00000348035.8_1_7:6442739-6442802:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2616271972656	2	428.150951	854.28735	-0.17889	-7.6594E-05	2.9278	0.0012535	2.7489	0.0011769	428.15204957575975	90.855	0.23607	90.924	90.804	91.041	0.069328					8	5	2	0	0	0	0.20789	1	9327	9327		21.702	2.3424	1	31796			3530	10316	2289	2292	4108	4108					-0.14562223297605215
CGFASLLD	8	Unmodified	_CGFASLLD_					0	0	0		ENST00000439581.1_1_X:108872738-108877913:-|nuORF	ENST00000439581.1_1_X:108872738-108877913:-|nuORF	ENST00000439581.1_1_X:108872738-108877913:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.19390869140625	2	413.194196	824.37384	0.36856	0.00015229	-1.5039	-0.00062141	-1.1354	-0.00046913	413.19353569569154	84.288	3.3037	84.723	83.664	86.967	0.43538					144	80	2	0	0	0	0.86288	1	9875	9875		26.796	0	1	9340100			3531	11763	2290	2293	4109	4109					-0.0453719719973833
CGGRSRGL	8	Unmodified	_CGGRSRGL_					0	0	0		nc|ENSG00000184792|Q969R2-2|OSBP2;ENSG00000184792|ENST00000332585|OSBP2	nc|ENSG00000184792|Q969R2-2|OSBP2	nc|ENSG00000184792|Q969R2-2|OSBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.20867919921875	2	403.208504	804.402455	-0.18721	-7.5483E-05	1.3352	0.00053838	1.148	0.00046289	403.20895430476565	85.948	2.3712	86.015	85.029	87.4	0.067268					117	54	4	0	0	0	0.82464	1	8683	8683		21.702	0	1	1482400			3532	7642	2291	2294	4110	4110					-0.007570347799287447
CGLLVVSD	8	Unmodified	_CGLLVVSD_					0	0	0			REV__ENSG00000228570|ENST00000429984|NUTM2E	REV__ENSG00000228570|ENST00000429984|NUTM2E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.20831298828125	2	403.209847	804.40514	0.59952	0.00024173	-2.8003	-0.0011291	-2.2008	-0.00088739	403.20865750603866	85.732	1.8224	85.881	85.428	87.25	0.14857					100	42	4	0	0	0	0.86791	1	8453	8453		28.254	2.8041	1	1321000	+		3533	22987	2292	2295	4111	4111					-0.004886241656436141
CGLMLFTL	8	Unmodified	_CGLMLFTL_					0	0	0			REV__ENSG00000213625|ENST00000371065|LEPROT	REV__ENSG00000213625|ENST00000371065|LEPROT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.23162841796875	2	449.232267	896.449982	0.59617	0.00026782	-4.3791	-0.0019672	-3.7829	-0.0016994	449.2302610410389	83.151	3.4859	83.298	82.027	85.513	0.14694					178	80	3	0	0	0	0.92176	1	8076	8076		46.766	9.738	1	225870	+		3534	23624	2293	2296	4112	4112					-0.0023851662396054962
CGPDPVLH	8	Unmodified	_CGPDPVLH_					0	0	0			REV__ENSG00000100412|ENST00000216254|ACO2	REV__ENSG00000100412|ENST00000216254|ACO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.19677734375	2	419.199813	836.385073	0.74886	0.00031392	2.9977	0.0012566	3.7466	0.0015706	419.20134698598764	86.864	0.95348	87.31	86.978	87.932	0.44628					47	22	3	0	0	0	0.86791	1	10175	10175		28.254	5.2176	1	332090	+		3535	17190	2294	2297	4113	4113					-0.03966375105596853
CGPGGHVTC	9	Unmodified	_CGPGGHVTC_					0	0	0		ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	ENSG00000275395|ENST00000616721|FCGBP	ENSG00000275395|ENST00000616721|FCGBP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	414.7615661621094	2	415.667823	829.321093	-1.8081	-0.00075158	0.07591	3.1553E-05	-1.7322	-0.00072003	415.66507076295636	87.745	1.2446	87.947	87.457	88.701	0.20115					53	29	2	0	0	0	0.20789	1	8741	8741		18.324	0	1	115100			3536	9002	2295	2298	4114	4114					-0.10039478534190494
CGPKVPIK	8	Unmodified	_CGPKVPIK_					0	0	0		ENST00000527005.5_1_6:135286419-135303731:-|nuORF;nc|ENSG00000112339|Q9Y450-4|HBS1L;ENSG00000112339|ENST00000367837|HBS1L	ENST00000527005.5_1_6:135286419-135303731:-|nuORF	ENST00000527005.5_1_6:135286419-135303731:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.2541198730469	2	421.251849	840.489145	2.7224	0.0011468	2.4777	0.0010437	5.2001	0.0021906	421.25268060933485	84.188	1.829	84.247	83.761	85.59	0.059258					100	41	4	0	0	0	0.81548	1	8469	8469		20.482	2.1574	1	871350			3537	2659	2296	2299	4115	4115					0.06251951721912974
CGPPVEDH	8	Unmodified	_CGPPVEDH_					0	0	0			REV__ENST00000320895.9_1_5:1344528-1345152:-|nuORF	REV__ENST00000320895.9_1_5:1344528-1345152:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.1806945800781	2	427.179078	852.343602	1.8599	0.00079452	2.5741	0.0010996	4.434	0.0018941	427.1801609884198	102.54	0.57593	102.8	102.43	103	0.25452					35	15	4	0	0	0	0.90024	1	12440	12440		39.021	5.5059	1	1638100	+		3538	25005	2297	2300	4116	4116					-0.0884755586492929
CGPPVEDH	8	Unmodified	_CGPPVEDH_					0	0	0			REV__ENST00000320895.9_1_5:1344528-1345152:-|nuORF	REV__ENST00000320895.9_1_5:1344528-1345152:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	427.179078	852.343602	-1.666	-0.00071169	2.7942	0.0011936	1.1282	0.00048195	427.17989741956023	102.49	0.4536	102.68	102.48	102.94	0.19484	-0.056771	0.00037501	NaN	39.021	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55673	+		3539	25005	2297	2300							-0.0884755586492929
CGPPVEDH	8	Unmodified	_CGPPVEDH_					0	0	0			REV__ENST00000320895.9_1_5:1344528-1345152:-|nuORF	REV__ENST00000320895.9_1_5:1344528-1345152:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	427.179078	852.343602	0.7338	0.00031347	2.4036	0.0010268	3.1374	0.0013402	427.17992290958233	102.52	0.28973	102.65	102.57	102.86	0.13523	-0.086846	4.1285E-05	NaN	39.021	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109970	+		3540	25005	2297	2300							-0.0884755586492929
CGPRDPPAS	9	Unmodified	_CGPRDPPAS_					0	0	0		nc|ENSG00000226950|P0C864|DANCR	nc|ENSG00000226950|P0C864|DANCR	nc|ENSG00000226950|P0C864|DANCR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2742004394531	2	450.205627	898.396701	1.3359	0.00060142	2.107	0.00094859	3.4429	0.00155	450.20658399405914	93.307	0.42266	93.352	93.198	93.621	0.045456					10	9	2	0	0	0	0.20789	1	9785	9785		44.117	18.667	1	29972			3541	15265	2298	2301	4117	4117					-0.056561780822676155
CGRFCVPPV	9	Unmodified	_CGRFCVPPV_					0	0	0		ENSG00000124116|ENST00000243938|WFDC3;ENST00000474942.5_1_20:44403069-44408499:-|nuORF	ENSG00000124116|ENST00000243938|WFDC3	ENSG00000124116|ENST00000243938|WFDC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.2367858886719	2	489.238415	976.462278	-0.72549	-0.00035494	-3.3458	-0.0016369	-4.0713	-0.0019918	489.23682827265793	62.903	2.2218	63.017	62.721	64.943	0.11388					298	98	5	0	0	0	0.5393	1	5505	5505		50.025	5.9077	1	3506900			3542	3305	2299	2302	4118	4118					-0.026894801609159913
CGRPAGLLL	9	Unmodified	_CGRPAGLLL_					0	0	0			REV__ENSG00000153246|ENST00000283243|PLA2R1	REV__ENSG00000153246|ENST00000283243|PLA2R1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2741394042969	2	450.260205	898.505857	-1.1074	-0.00049864	2.0482	0.00092223	0.94077	0.00042359	450.2618590809045	93.176	0.26049	93.176	92.981	93.242	0					7	5	2	0	0	0	0.20789	1	9152	9152		24.203	0	1	31992	+		3543	20341	2300	2303	4119	4119					0.05254452607891835
CGRPAGLLL	9	Unmodified	_CGRPAGLLL_					0	0	0			REV__ENSG00000153246|ENST00000283243|PLA2R1	REV__ENSG00000153246|ENST00000283243|PLA2R1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2742614746094	2	450.260205	898.505857	-0.14139	-6.3662E-05	-0.85265	-0.00038391	-0.99403	-0.00044757	450.2597822498281	93.125	0.28886	93.195	92.927	93.216	0.06987					10	6	2	0	0	0	0.20789	1	9639	9639		33.516	0	1	291310	+		3544	20341	2300	2303	4120	4120					0.05254452607891835
CGRPAGLLL	9	Unmodified	_CGRPAGLLL_					0	0	0			REV__ENSG00000153246|ENST00000283243|PLA2R1	REV__ENSG00000153246|ENST00000283243|PLA2R1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2742919921875	2	450.260205	898.505857	1.7505	0.00078819	0.0017217	7.752E-07	1.7522	0.00078896	450.26046022902335	93.371	0.59563	93.309	93.246	93.842	-0.061432					21	13	2	0	0	0	0.20789	1	9940	9940		33.516	1.5607	1	142850	+		3545	20341	2300	2303	4121	4121					0.05254452607891835
CGRVMKKRR	9	Unmodified	_CGRVMKKRR_					0	0	0		ENST00000358731.8_2_5:70751498-70751573:+|nuORF	ENST00000358731.8_2_5:70751498-70751573:+|nuORF	ENST00000358731.8_2_5:70751498-70751573:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3294677734375	2	567.328962	1132.64337	-0.51077	-0.00028978	2.0742	0.0011767	1.5634	0.00088697	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.78983	1	9192	9192		27.882	4.3595	1	11042000			3546	10414	2301	2304	4122	4122					0.08235457935643353
CGYLPGCP	8	Unmodified	_CGYLPGCP_					0	0	0		ENSG00000011422|ENST00000340093|PLAUR;nc|ENSG00000011422|Q03405-2|PLAUR	ENSG00000011422|ENST00000340093|PLAUR	ENSG00000011422|ENST00000340093|PLAUR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.1716613769531	2	405.169667	808.324781	2.7756	0.0011246	2.5404	0.0010293	5.3161	0.0021539	405.1705677561798	27.457	1.1104	27.429	26.654	27.764	-0.027704					39	27	2	0	0	0	0.84567	1	1259	1259		24.504	0.30126	1	47405			3547	791	2302	2305	4123	4123					-0.08704808760330707
CHACHPGETHH	11	Unmodified	_CHACHPGETHH_					0	0	0			REV__ENSG00000172037|ENST00000305544|LAMB2	REV__ENSG00000172037|ENST00000305544|LAMB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	615.3129272460938	2	614.740373	1227.46619	0.37048	0.00022775	2.1252	0.0013064	2.4957	0.0015342	614.741792824687	79.959	0.41953	80.485	80.275	80.695	0.52677					15	9	2	0	0	0	0.17431	1	9196	9196		18.262	3.3972	1	171690	+		3548	21798	2303	2306	4124	4124					-0.1384404240513959
CHAPPVLAQ	9	Unmodified	_CHAPPVLAQ_					0	0	0		ENST00000416860.2_2_1:2486942-2487152:-|nuORF	ENST00000416860.2_2_1:2486942-2487152:-|nuORF	ENST00000416860.2_2_1:2486942-2487152:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.2410583496094	2	468.242012	934.469472	-1.1975	-0.00056073	-0.16125	-7.5502E-05	-1.3588	-0.00063623	468.24180543904555	38.577	0.67142	39.099	38.911	39.582	0.52235					30	15	3	0	0	0	0.5393	1	3196	3196		50.025	9.4519	1	1100100			3549	11403	2304	2307	4125	4125					-0.000384242888458175
CHCCTSDDT	9	Unmodified	_CHCCTSDDT_					0	0	0		ENST00000463441.5_1_7:150020582-150023090:+|nuORF	ENST00000463441.5_1_7:150020582-150023090:+|nuORF	ENST00000463441.5_1_7:150020582-150023090:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.8055725097656	2	492.646427	983.278301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.774	1	68.903	68.403	69.403	0.12838								0	0	0	0.34024	1	6206	6206		17.365	0.89182	1				3550	12064	2305	2308	4126	4126					-0.21400661444590696
CHCDGICD	8	Unmodified	_CHCDGICD_					0	0	0		chr2:165163709-165164392|39|52.64|0.63|6.38|-|0|SCN3A,SCN3A|1	chr2:165163709-165164392|39|52.64|0.63|6.38|-|0|SCN3A,SCN3A|1	chr2:165163709-165164392|39|52.64|0.63|6.38|-|0|SCN3A,SCN3A|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.2555236816406	2	433.135498	864.256444	-1.8305	-0.00079286	-4.3279	-0.0018746	-6.1584	-0.0026674	433.13447615542674	107.27	0.40506	107.31	107.18	107.58	0.036125					12	9	2	0	0	0	0.4196	1	11462	11462		3.6843	2.3567	1	98327			3551	312	2306	2309	4127	4127					-0.18111421402511496
CHCQCAGMD	9	Unmodified	_CHCQCAGMD_					0	0	0		nc|ENSG00000104918|Q9HD89-2|RETN;ENSG00000104918|ENST00000221515|RETN	nc|ENSG00000104918|Q9HD89-2|RETN	nc|ENSG00000104918|Q9HD89-2|RETN	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.1502380371094	2	484.148083	966.281613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.236	1	17.759	17.259	18.259	-0.47694								0	0	0	0.34348	1	362	362		16.473	5.6076	1				3552	2168	2307	2310	4128	4128					-0.20287689871588555
CHELAKAVLQ	10	Unmodified	_CHELAKAVLQ_					0	0	0			REV__ENST00000556729.1_1_14:24108037-24109131:+|nuORF	REV__ENST00000556729.1_1_14:24108037-24109131:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	556.2982788085938	2	556.300059	1110.58556	0.56899	0.00031653	-3.9787	-0.0022133	-3.4097	-0.0018968	556.2977506736099	68.73	0.66137	68.859	68.573	69.235	0.12839					33	25	2	0	0	0	0.54701	1	6199	6199		52.937	12.159	1	114330	+		3553	17225	2308	2311	4129	4129					0.03469474491203073
CHGALPLCHPG	11	Unmodified	_CHGALPLCHPG_					0	0	0		nc|ENSG00000293543|Q6B8I1-4|DUSP13A	nc|ENSG00000293543|Q6B8I1-4|DUSP13A	nc|ENSG00000293543|Q6B8I1-4|DUSP13A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.7579956054688	2	552.757504	1103.50045	0.42294	0.00023378	2.151	0.001189	2.5739	0.0014228	552.7585218072531	49.286	1.1436	49.286	48.486	49.63	0.00016785					48	25	3	0	0	0	0.69735	1	4139	4139		31.955	4.0726	1	244780			3554	15357	2309	2312	4130	4130					-0.04715594246249566
CHHVVLSF	8	Carbamidomethyl (C)	_C(Carbamidomethyl (C))HHVVLSF_	C(1)HHVVLSF		C(78)HHVVLSF		0	1	0			REV__ENSG00000137812|ENST00000399668|KNL1	REV__ENSG00000137812|ENST00000399668|KNL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7472839355469	2	499.747462	997.480371	0.048924	2.445E-05	-1.0293	-0.00051438	-0.98036	-0.00048993	499.74682857522964	74.518	3.0175	75.077	74.05	77.067	0.55891					154	74	3	0	0	0	0.45589	1	8426	8426		77.944	6.6481	1	1021700	+		3555	19410	2310	2313	4131	4131	247				-0.018470219145456213
CHLLRQKRLRR	11	Unmodified	_CHLLRQKRLRR_					0	0	0			REV__ENST00000263119.9_1_22:24432555-24437617:+|nuORF	REV__ENST00000263119.9_1_22:24432555-24437617:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.2773132324219	3	493.636889	1477.88884	0.21555	0.0001064	-2.9445	-0.0014535	-2.729	-0.0013471	493.9698450049421	29.799	1.7727	29.709	28.844	30.616	-0.089546					93	40	3	0	0	0	0.18216	1	2017	2017		6.001	1.1149	1	223350	+		3556	24440	2311	2314	4132	4132					0.16900874389966702
CHLYVRLKRRK	11	Unmodified	_CHLYVRLKRRK_					0	0	0			REV__nc|ENSG00000173083|Q9Y251-3|HPSE	REV__nc|ENSG00000173083|Q9Y251-3|HPSE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.3005065917969	3	491.297873	1470.87179	2.8436	0.001397	-0.34153	-0.00016779	2.502	0.0012292	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.80813	1	13078	13078		9.6461	0.84683	1	3274400	+		3557	21887	2312	2315	4133	4133					0.15518953784135192
CHNAAEKYR	9	Unmodified	_CHNAAEKYR_					0	0	0			REV__ENST00000470139.1_2_1:43893713-43894182:+|nuORF	REV__ENST00000470139.1_2_1:43893713-43894182:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3167114257812	2	546.256182	1090.49781	0.49933	0.00027276	-1.0453	-0.00057102	-0.546	-0.00029826	546.2553735492553	90.773	0.68574	91.224	90.904	91.59	0.45058					32	16	3	0	0	0	0.20789	1	10775	10775		32.812	0	1	318810	+		3558	23307	2313	2316	4134	4134					-0.04381726379551765
CHQRCFNA	8	Unmodified	_CHQRCFNA_					0	0	0		nc|ENSG00000143341|Q96RW7-2|HMCN1;ENSG00000143341|ENST00000271588|HMCN1	nc|ENSG00000143341|Q96RW7-2|HMCN1	nc|ENSG00000143341|Q96RW7-2|HMCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.7059326171875	2	489.705271	977.395989	0.38477	0.00018842	0.72755	0.00035628	1.1123	0.00054471	489.70553421478036	95.642	0.89525	96.062	95.744	96.639	0.41964					40	21	2	0	0	0	0.884	1	11500	11500		33.516	3.0119	1	702040			3559	4621	2314	2317	4135	4135					-0.09361296002975905
CHVGKVVVC	9	Unmodified	_CHVGKVVVC_					0	0	0		ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	ENSG00000275395|ENST00000616721|FCGBP	ENSG00000275395|ENST00000616721|FCGBP	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2875671386719	2	472.24624	942.477928	-0.97349	-0.00045973	-2.0615	-0.00097354	-3.035	-0.0014333	472.245378902652	95.593	0.2132	95.593	95.529	95.742	0					5	4	2	0	0	0	0.20789	1	9529	9529		42.474	14.592	1	52732			3560	9002	2315	2318	4136	4136					0.004388063561236777
CHVPSGRLD	9	Unmodified	_CHVPSGRLD_					0	0	0			REV__ENSG00000156395|ENST00000369701|SORCS3	REV__ENSG00000156395|ENST00000369701|SORCS3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2696228027344	2	492.240001	982.465449	-0.11883	-5.8492E-05	-3.4624	-0.0017044	-3.5813	-0.0017628	492.2382018120931	53.779	0.45828	54.193	53.868	54.326	0.4139					16	10	2	0	0	0	0.20789	1	5424	5424		45.972	1.5951	1	199260	+		3561	20483	2316	2319	4137	4137					-0.026485137825602578
CHVPSGRLD	9	Unmodified	_CHVPSGRLD_					0	0	0			REV__ENSG00000156395|ENST00000369701|SORCS3	REV__ENSG00000156395|ENST00000369701|SORCS3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.777099609375	2	492.240001	982.465449	-0.42837	-0.00021086	-4.3641	-0.0021482	-4.7925	-0.002359	492.23773753054866	53.519	0.5016	54.132	53.818	54.32	0.61352					18	11	2	0	0	0	0.20789	1	5410	5410		31.53	0	1	232460	+		3562	20483	2316	2319	4138	4138					-0.026485137825602578
CHYLLLELSD	10	Unmodified	_CHYLLLELSD_					0	0	0			REV__ENSG00000136367|ENST00000419474|ZFHX2	REV__ENSG00000136367|ENST00000419474|ZFHX2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.7051086425781	3	402.53388	1204.57981	2.3167	0.00093255	0.53089	0.0002137	2.8476	0.0011463	402.53462719516006	25.363	0.4784	24.932	24.672	25.15	-0.4311					16	10	2	0	0	0	0.37624	1	1299	1299		11.636	0	1	43118	+		3563	19304	2317	2320	4139	4139					-0.01429668811101692
CIAGVPLLF	9	Unmodified	_CIAGVPLLF_					0	0	0			REV__ENSG00000139874|ENST00000267377|SSTR1	REV__ENSG00000139874|ENST00000267377|SSTR1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.76885986328125	2	466.767332	931.52011	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.23	1	75.362	74.862	75.862	0.13208								0	0	0	0.30219	1	6991	6991		29.842	1.5873	1		+		3564	19577	2318	2321	4140	4140					0.05161105036165736
CIAKDVPR	8	Unmodified	_CIAKDVPR_					0	0	0			REV__nc|ENSG00000137807|Q02241-2|KIF23	REV__nc|ENSG00000137807|Q02241-2|KIF23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.24761962890625	2	451.249837	900.485122	0.4368	0.00019711	-2.3688	-0.0010689	-1.932	-0.00087182	451.2486012382637	65.524	1.1913	65.65	65.09	66.281	0.12532					110	62	3	0	0	0	0.88185	1	5842	5842		32.812	0.85756	1	1138900	+		3565	19408	2319	2322	4141	4141					0.0308986222820522
CIASSSLTSF	10	Unmodified	_CIASSSLTSF_					0	0	0			REV__ENSG00000165816|ENST00000392982|VWA2	REV__ENSG00000165816|ENST00000392982|VWA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2374572753906	2	508.241875	1014.4692	-1.0081	-0.00051235	-3.5346	-0.0017964	-4.5426	-0.0023088	508.2398804839846	41.451	0.51683	41.411	41.215	41.732	-0.04081					26	12	3	0	0	0	0.67608	1	3137	3137		45.952	1.8352	1	186540	+		3566	21224	2320	2323	4142	4142					-0.03745888799357999
CIDCYYEG	8	Unmodified	_CIDCYYEG_					0	0	0			REV__ENST00000514589.5_1_4:76416932-76439505:-|nuORF	REV__ENST00000514589.5_1_4:76416932-76439505:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.2375793457031	2	483.172604	964.330655	-2.8757	-0.0013895	4.3556	0.0021045	1.4799	0.00071504	483.17495529083845	39.877	0.12752	39.887	39.815	39.943	0.0092773					4	2	2	0	0	0	0.4196	1	2825	2825		28.254	7.7724	1	31095	+		3567	20965	2321	2324	4143	4143					-0.1529375503934034
CIFNLPIIL	9	Unmodified	_CIFNLPIIL_					0	0	0			REV__ENST00000400000.6_1_18:9954209-9954779:+|nuORF	REV__ENST00000400000.6_1_18:9954209-9954779:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.7367553710938	2	523.309364	1044.60417	-0.029091	-1.5224E-05	3.6411	0.0019054	3.612	0.0018902	523.3111484485588	38.012	0.70575	38.534	38.247	38.952	0.52235					32	17	2	0	0	0	0.20789	1	3137	3137		38.806	10.924	1	914930	+		3568	26242	2322	2325	4144	4144					0.08365636133089538
CIIRLVPVN	9	Unmodified	_CIIRLVPVN_					0	0	0			REV__ENST00000468865.6_1_1:43829752-43830910:-|nuORF	REV__ENST00000468865.6_1_1:43829752-43830910:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8082885742188	2	513.810062	1025.60557	-0.38907	-0.00019991	-1.6263	-0.0008356	-2.0153	-0.0010355	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.78058	2	3721	3702;3721		30.504	5.0535	1	1358900	+		3569	27189	2323	2326	4145;4146	4146					0.09379270221825209
CIIRLVPVN	9	Unmodified	_CIIRLVPVN_					0	0	0			REV__ENST00000468865.6_1_1:43829752-43830910:-|nuORF	REV__ENST00000468865.6_1_1:43829752-43830910:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8087158203125	2	513.810062	1025.60557	0.34332	0.0001764	-2.5254	-0.0012976	-2.182	-0.0011212	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.7932	1	3753	3753		18.324	4.5491	1	1306000	+		3570	27189	2323	2326	4147	4147					0.09379270221825209
CIITGLRRD	9	Unmodified	_CIITGLRRD_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.7933959960938	2	523.792401	1045.57025	0.099109	5.1912E-05	2.6856	0.0014067	2.7847	0.0014586	523.7937036505126	19.091	1.2071	19.017	18.843	20.05	-0.073702					63	35	3	0	0	0	0.77244	1	381	381		32.812	4.9302	1	115810	+		3571	17579	2324	2327	4148	4148					0.04928607694000675
CIKFLFHLL	9	Unmodified	_CIKFLFHLL_					0	0	0		ENST00000443035.7_1_15:66025097-66030063:-|nuORF	ENST00000443035.7_1_15:66025097-66030063:-|nuORF	ENST00000443035.7_1_15:66025097-66030063:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3303833007812	2	567.33063	1132.64671	-1.2006	-0.00068114	-0.32659	-0.00018529	-1.5272	-0.00086642	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.7932	1	9442	9442		19.36	0.25645	1	15673000			3572	11800	2325	2328	4149	4149					0.08569031261299642
CIKLIKMYT	9	Oxidation (M)	_CIKLIKM(Oxidation (M))YT_		CIKLIKM(1)YT		CIKLIKM(46)YT	0	0	1		ENSG00000121270|ENST00000356608|ABCC11;nc|ENSG00000121270|Q96J66-2|ABCC11;ENST00000567385.5_1_16:48244807-48265838:-|nuORF	ENSG00000121270|ENST00000356608|ABCC11	ENSG00000121270|ENST00000356608|ABCC11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	564.810546875	2	564.811413	1127.60827	-1.2607	-0.00071205	-0.28391	-0.00016036	-1.5446	-0.00087241	564.8111502403638	109.93	1.6377	109.87	109.63	111.26	-0.055077					173	65	5	0	0	0	0.62081	1	11987	11987		45.952	10.334	1	6827300			3573	3171	2326	2329	4150	4150		62			0.04957357564467202
CILFIDEI	8	Unmodified	_CILFIDEI_					0	0	0		ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.23748779296875	2	483.254254	964.493955	-1.2529	-0.00060548	3.446	0.0016653	2.1931	0.0010598	483.2561521642775	39.644	0.2583	39.601	39.493	39.752	-0.043694					7	5	2	0	0	0	0.4196	1	2869	2869		35.201	0	1	38160			3574	4496	2327	2330	4151	4151					0.010287910740089501
CILITNPVE	9	Carbamidomethyl (C)	_C(Carbamidomethyl (C))ILITNPVE_	C(1)ILITNPVE		C(41)ILITNPVE		0	1	0			REV__ENSG00000149596|ENST00000372980|JPH2	REV__ENSG00000149596|ENST00000372980|JPH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.781982421875	2	529.781167	1057.54778	-0.26256	-0.0001391	-0.11955	-6.3334E-05	-0.38211	-0.00020243	529.7809232100764	52.644	0.70679	52.569	52.293	53	-0.074509					42	20	3	0	0	0	0.69624	1	4270	4270		40.778	6.6056	1	513400	+		3575	20184	2328	2331	4152	4152	256				0.021309635057377818
CILWFAWIM	9	Unmodified	_CILWFAWIM_					0	0	0			REV__ENST00000554981.1_1_14:57060026-57070625:+|nuORF	REV__ENST00000554981.1_1_14:57060026-57070625:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	591.865234375	2	591.795566	1181.57658	1.1816	0.00069929	-2.7047	-0.0016006	-1.523	-0.00090132	591.7940522856334	36.712	0.49321	37.198	36.958	37.451	0.48581					25	11	3	0	0	0	0.20789	1	2891	2891		29.842	10.738	1	243990	+		3576	28675	2329	2332	4153	4153					-0.0069459039882531215
CIPLPLVFKGK	11	Unmodified	_CIPLPLVFKGK_					0	0	0			REV__ENSG00000132623|ENST00000378392|ANKEF1	REV__ENSG00000132623|ENST00000378392|ANKEF1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.7134094238281	3	405.582505	1213.72569	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.562	1	27.59	27.09	28.09	0.02817								0	0	0	0.56276	1	1106	1106		28.577	4.3449	1		+		3577	19017	2330	2333	4154	4154					0.1273725849555376
CIQGKLVL	8	Unmodified	_CIQGKLVL_					0	0	0			REV__nc|ENSG00000087237|P11597-2|CETP	REV__nc|ENSG00000087237|P11597-2|CETP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2679138183594	2	437.264956	872.515359	-0.37471	-0.00016385	2.1781	0.00095241	1.8034	0.00078857	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.80706	1	828	828		19.36	1.0356	1	970200	+		3578	16927	2331	2334	4155	4155					0.07400220893384812
CIQGKLVL	8	Unmodified	_CIQGKLVL_					0	0	0			REV__nc|ENSG00000087237|P11597-2|CETP	REV__nc|ENSG00000087237|P11597-2|CETP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2657165527344	2	437.264956	872.515359	-0.36505	-0.00015962	2.0195	0.00088307	1.6545	0.00072345	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.80706	2	918	918;1053		26.796	4.8362	1	1300600	+		3579	16927	2331	2334	4156;4157	4156					0.07400220893384812
CIQGNLFDVNH	11	Unmodified	_CIQGNLFDVNH_					0	0	0			REV__chr4:177360677-177362289|63|35.84|0.97|5.2|+|1|NEIL3,NEIL3|1	REV__chr4:177360677-177362289|63|35.84|0.97|5.2|+|1|NEIL3,NEIL3|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.8023071289062	2	630.295504	1258.57646	0.64029	0.00040357	1.7724	0.0011171	2.4127	0.0015207	630.2965544942194	23.374	0.99222	23.435	23.057	24.05	0.060431					84	35	3	0	0	0	0.73893	1	826	826		24.519	6.2571	1	334210	+		3580	15827	2332	2335	4158	4158					-0.042489188650961296
CIQIQLQREI	10	Unmodified	_CIQIQLQREI_					0	0	0		ENSG00000166398|ENST00000299505|GARRE1	ENSG00000166398|ENST00000299505|GARRE1	ENSG00000166398|ENST00000299505|GARRE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	622.3463134765625	2	622.344997	1242.67544	1.3041	0.0008116	2.4739	0.0015396	3.778	0.0023512	622.3465977924652	95.841	2.6338	96.072	95.148	97.782	0.23103					155	62	3	0	0	0	0.86718	1	9847	9847		27.882	0.83493	1	379700			3581	6190	2333	2336	4159	4159					0.06381104099773438
CIRCAYPK	8	Unmodified	_CIRCAYPK_					0	0	0			REV__ENSG00000141040|ENST00000395825|ZNF287	REV__ENSG00000141040|ENST00000395825|ZNF287	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.9925537109375	2	477.238415	952.462278	-0.94688	-0.00045189	-2.9283	-0.0013975	-3.8752	-0.0018494	477.2367748273804	73.092	0.19584	73.646	73.52	73.716	0.55386					6	4	2	0	0	0	0.4196	1	8225	8225		24.203	7.7296	1	179740	+		3582	19660	2334	2337	4160	4160					-0.015854801609293645
CIVLSFVF	8	Unmodified	_CIVLSFVF_					0	0	0		ENST00000395290.6_1_11:47489658-47490021:-|nuORF	ENST00000395290.6_1_11:47489658-47490021:-|nuORF	ENST00000395290.6_1_11:47489658-47490021:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.25238037109375	2	464.254057	926.493561	-1.467	-0.00068104	1.2482	0.00057946	-0.21881	-0.00010158	464.25450213652135	80.516	0.77847	80.621	80.13	80.909	0.10526					59	23	4	0	0	0	0.87276	1	7625	7625		29.842	3.1486	1	320700			3583	11089	2335	2338	4161	4161					0.027374161448278755
CIVNGDEITF	10	Unmodified	_CIVNGDEITF_					0	0	0			REV__ENST00000323571.8_1_17:38437179-38437275:+|nuORF	REV__ENST00000323571.8_1_17:38437179-38437275:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.758544921875	2	555.760432	1109.50631	0.054838	3.0477E-05	-3.081	-0.0017123	-3.0262	-0.0016818	555.7586137373056	64.35	0.80875	64.904	64.561	65.37	0.55386					58	19	4	0	0	0	0.27582	1	6958	6958		75.043	1.0686	1	870100	+		3584	25032	2336	2339	4162	4162					-0.04406217253608702
CKDSLLGGVL	10	Unmodified	_CKDSLLGGVL_					0	0	0		nc|ENSG00000107099|Q8NF50-4|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;ENSG00000107099|ENST00000432829|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.7731628417969	2	502.775885	1003.53722	-0.85708	-0.00043092	-2.9883	-0.0015024	-3.8453	-0.0019333	502.77425388470994	48.976	1.1303	49.436	48.862	49.992	0.45983					53	27	3	0	0	0	0.18001	1	4765	4765		90.777	2.1338	1	1610400			3585	2330	2337	2340	4163	4163					0.0355898085130093
CKDVAVRRLV	10	Unmodified	_CKDVAVRRLV_					0	0	0			REV__nc|ENSG00000114982|Q9P2N6-8|KANSL3;REV__ENST00000487070.5_1_2:97281260-97297069:-|nuORF	REV__ENST00000487070.5_1_2:97281260-97297069:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	579.8441772460938	2	579.842425	1157.6703	0.68543	0.00039744	2.1926	0.0012714	2.878	0.0016688	579.8435684562951	102.05	1.3312	102.24	101.84	103.17	0.19483					96	32	4	0	0	0	0.86587	1	10834	10834		29.17	5.6474	1	2191200	+		3586	18077;27569	2338	2341	4164	4164					0.09776845027818126
CKEPFRPG	8	Unmodified	_CKEPFRPG_					0	0	0		ENSG00000204613|ENST00000449742|TRIM10;nc|ENSG00000204613|Q9UDY6-2|TRIM10	ENSG00000204613|ENST00000449742|TRIM10	ENSG00000204613|ENST00000449742|TRIM10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.23333740234375	2	467.234187	932.453822	-0.26264	-0.00012271	-2.1411	-0.0010004	-2.4037	-0.0011231	467.23346633413524	64.606	2.155	65.159	64.517	66.672	0.55386					169	56	5	0	0	0	0.89043	1	7009	7009		35.618	1.4457	1	8508300			3587	8467	2339	2342	4165	4165					-0.01510710805882809
CKEVKVAIQ	9	Unmodified	_CKEVKVAIQ_					0	0	0			REV__ENSG00000137812|ENST00000399668|KNL1	REV__ENSG00000137812|ENST00000399668|KNL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.7908630371094	2	509.291702	1016.56885	-1.3961	-0.000711	-2.0808	-0.0010598	-3.4769	-0.0017708	509.2906137003978	53.27	0.57617	53.27	52.908	53.484	0					27	15	2	0	0	0	0.6204	1	4430	4430		45.972	5.1941	1	67955	+		3588	19410	2340	2343	4166	4166					0.06122973605260995
CKFPKEESHI	10	Unmodified	_CKFPKEESHI_					0	0	0			REV__ENSG00000198046|ENST00000504904|ZNF667	REV__ENSG00000198046|ENST00000504904|ZNF667	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852783203125	3	406.537624	1216.59104	0.036523	1.4848E-05	3.3068	0.0013443	3.3433	0.0013592	406.538878921445	32.786	0.31805	32.753	32.598	32.916	-0.032677					21	14	2	0	0	0	0.37624	1	1545	1545		21.686	0	1	57878	+		3589	23292	2341	2344	4167	4167					-0.008588467169829528
CKFPKNEM	8	Unmodified	_CKFPKNEM_					0	0	0			REV__ENSG00000197372|ENST00000359788|ZNF675	REV__ENSG00000197372|ENST00000359788|ZNF675	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.7377014160156	2	498.735706	995.456858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.596	1	25.555	25.055	26.055	-0.04117								0	0	0	0.29631	1	1091	1091		25.45	0	1		+		3590	23223	2342	2345	4168	4168					-0.04105203743392849
CKGKNVRA	8	Unmodified	_CKGKNVRA_					0	0	0		ENST00000556703.1_1_14:57507861-57508260:+|nuORF	ENST00000556703.1_1_14:57507861-57508260:+|nuORF	ENST00000556703.1_1_14:57507861-57508260:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2630310058594	2	438.247629	874.480705	0.19274	8.4468E-05	0.49191	0.00021558	0.68465	0.00030005	438.24603243801283	40.111	0.38319	40.192	40.046	40.429	0.081345					20	11	3	0	0	0	0.4196	1	2516	2516		31.955	5.1588	1	115530			3591	13753	2343	2346	4169	4169					0.038443978052896455
CKGKNVRA	8	Unmodified	_CKGKNVRA_					0	0	0		ENST00000556703.1_1_14:57507861-57508260:+|nuORF	ENST00000556703.1_1_14:57507861-57508260:+|nuORF	ENST00000556703.1_1_14:57507861-57508260:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2635192871094	2	438.247629	874.480705	1.6543	0.00072497	2.5007	0.0010959	4.155	0.0018209	438.24969245066086	35.73	0.64249	36.17	35.769	36.412	0.44043					35	16	3	0	0	0	0.4196	1	2737	2737		24.203	0	1	636400			3592	13753	2343	2346	4170	4170					0.038443978052896455
CKIRRRWFLP	10	Unmodified	_CKIRRRWFLP_					0	0	0		ENST00000560857.1_1_15:60318033-60328380:+|nuORF	ENST00000560857.1_1_15:60318033-60328380:+|nuORF	ENST00000560857.1_1_15:60318033-60328380:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.758544921875	3	458.936164	1373.78666	1.0184	0.00046737	0.90719	0.00041634	1.9256	0.00088372	458.93617965758835	27.904	0.39905	27.65	27.454	27.853	-0.25465					10	8	2	0	0	0	0.37624	1	1663	1663		3.8434	0.99161	1	37209			3593	13821	2344	2347	4171	4171					0.11472208318377852
CKIRRRWFLP	10	Unmodified	_CKIRRRWFLP_					0	0	0		ENST00000560857.1_1_15:60318033-60328380:+|nuORF	ENST00000560857.1_1_15:60318033-60328380:+|nuORF	ENST00000560857.1_1_15:60318033-60328380:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	458.936164	1373.78666	-1.1647	-0.00053454	3.3772	0.0015499	2.2124	0.0010154	459.2719813506111	27.871	0.35377	27.774	27.576	27.929	-0.096947	0.062005	0.00061093	NaN	3.8434	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49667			3594	13821	2344	2347							0.11472208318377852
CKKCVVVGN	9	Unmodified	_CKKCVVVGN_					0	0	0		ENSG00000064225|ENST00000483910|ST3GAL6	ENSG00000064225|ENST00000483910|ST3GAL6	ENSG00000064225|ENST00000483910|ST3GAL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	475.2514953613281	2	475.251523	948.488493	-0.49216	-0.0002339	1.0843	0.00051531	0.59214	0.00028141	475.25180957980297	20.249	0.49515	20.179	19.964	20.46	-0.070011					40	21	3	0	0	0	0.74721	1	494	494		37.159	0	1	115120			3595	1098	2345	2348	4172	4172					0.012187890105678889
CKKCVVVGN	9	Unmodified	_CKKCVVVGN_					0	0	0		ENSG00000064225|ENST00000483910|ST3GAL6	ENSG00000064225|ENST00000483910|ST3GAL6	ENSG00000064225|ENST00000483910|ST3GAL6	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	475.251523	948.488493	-2.0503	-0.00097439	2.5248	0.0011999	0.47452	0.00022551	475.2526576119572	20.069	0.35871	20.069	19.855	20.214	0	0.0061517	0.001574	NaN	37.159	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48377			3596	1098	2345	2348							0.012187890105678889
CKKCVVVGN	9	Unmodified	_CKKCVVVGN_					0	0	0		ENSG00000064225|ENST00000483910|ST3GAL6	ENSG00000064225|ENST00000483910|ST3GAL6	ENSG00000064225|ENST00000483910|ST3GAL6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	475.251523	948.488493	-1.0121	-0.00048101	1.6156	0.00076781	0.60346	0.00028679	475.2522207475689	20.079	0.4436	20.123	19.972	20.415	0.043747	0.059527	0.00070984	NaN	37.159	30	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79072			3597	1098	2345	2348							0.012187890105678889
CKKCVVVGN	9	Unmodified	_CKKCVVVGN_					0	0	0		ENSG00000064225|ENST00000483910|ST3GAL6	ENSG00000064225|ENST00000483910|ST3GAL6	ENSG00000064225|ENST00000483910|ST3GAL6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	475.251523	948.488493	0.057292	2.7228E-05	0.82012	0.00038976	0.87741	0.00041699	475.2517314458472	19.895	0.29975	19.965	19.84	20.14	0.070711	-0.097783	-4.6255E-05	NaN	37.159	23	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79113			3598	1098	2345	2348							0.012187890105678889
CKKCVVVGN	9	Unmodified	_CKKCVVVGN_					0	0	0		ENSG00000064225|ENST00000483910|ST3GAL6	ENSG00000064225|ENST00000483910|ST3GAL6	ENSG00000064225|ENST00000483910|ST3GAL6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	475.251523	948.488493	0.68964	0.00032775	0.055857	2.6546E-05	0.7455	0.0003543	475.2513283533613	20.003	0.29123	19.982	19.852	20.143	-0.020922	-0.081117	-0.00077269	NaN	37.159	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77367			3599	1098	2345	2348							0.012187890105678889
CKKHDLSQ	8	Unmodified	_CKKHDLSQ_					0	0	0		ENST00000449866.2_1_12:105322449-105352514:-|nuORF	ENST00000449866.2_1_12:105322449-105352514:-|nuORF	ENST00000449866.2_1_12:105322449-105352514:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2757568359375	2	479.742376	957.4702	-0.39583	-0.0001899	-3.8513	-0.0018477	-4.2472	-0.0020376	479.7403246641751	57.282	0.67007	57.676	57.411	58.081	0.39407					27	16	2	0	0	0	0.4196	1	5913	5913		64.207	0	1	656510			3600	11881	2346	2349	4173	4173					-0.010236296397920341
CKKKAAAL	8	Unmodified	_CKKKAAAL_					0	0	0		ENSG00000187147|ENST00000361799|RNF220	ENSG00000187147|ENST00000361799|RNF220	ENSG00000187147|ENST00000361799|RNF220	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	416.75482177734375	2	416.757298	831.500044	-1.8373	-0.00076571	-3.781	-0.0015758	-5.6183	-0.0023415	416.7557703392063	69.009	0.92305	69.144	68.682	69.606	0.13521					98	39	4	0	0	0	0.85277	3	6211	6196;6211;6266		26.796	9.814	1	1065300			3601	7845	2347	2350	4174;4175;4176	4175					0.07755354096195788
CKKKAAAL	8	Unmodified	_CKKKAAAL_					0	0	0		ENSG00000187147|ENST00000361799|RNF220	ENSG00000187147|ENST00000361799|RNF220	ENSG00000187147|ENST00000361799|RNF220	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	416.7552795410156	2	416.757298	831.500044	-1.2346	-0.00051453	-4.0432	-0.001685	-5.2778	-0.0021996	416.7554996796795	69.232	0.75401	69.298	68.944	69.698	0.065506					85	35	3	0	0	0	0.86288	3	6215	6215;6224;6268		30.504	5.0938	1	1082800			3602	7845	2347	2350	4177;4178;4179	4177					0.07755354096195788
CKKLATVM	8	Unmodified	_CKKLATVM_					0	0	0			REV__ENST00000454679.6_2_10:19569053-19613005:+|nuORF	REV__ENST00000454679.6_2_10:19569053-19613005:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7615051269531	2	447.250991	892.48743	-0.0887	-3.9671E-05	-1.9982	-0.00089371	-2.0869	-0.00093338	447.25021484574364	24.078	0.34513	23.696	23.449	23.794	-0.38178					10	7	2	0	0	0	0.4196	1	1139	1139		3.9852	0	1	72346	+		3603	26927	2348	2351	4180	4180					0.03688574641660125
CKKLLVVCF	9	Unmodified	_CKKLLVVCF_					0	0	0			REV__ENST00000487064.1_1_19:33832314-33832719:+|nuORF	REV__ENST00000487064.1_1_19:33832314-33832719:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.306884765625	2	526.803391	1051.59223	-0.036904	-1.9441E-05	2.4598	0.0012958	2.4229	0.0012764	527.3054504644606	99.375	1.7033	99.425	98.884	100.59	0.04982					129	39	5	0	0	0	0.78058	1	10516	10516		30.504	2.6214	1	1726400	+		3604	27568	2349	2352	4181	4181					0.06849696118206339
CKKLLVVCF	9	Unmodified	_CKKLLVVCF_					0	0	0			REV__ENST00000487064.1_1_19:33832314-33832719:+|nuORF	REV__ENST00000487064.1_1_19:33832314-33832719:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.8153686523438	2	526.803391	1051.59223	0.81509	0.00042939	2.4976	0.0013157	3.3126	0.0017451	526.8069736704849	99.203	1.8022	99.359	98.454	100.26	0.15659					134	41	5	0	0	0	0.58151	2	10241	10241;10281		47.916	9.1095	1	2351200	+		3605	27568	2349	2352	4182;4183	4182					0.06849696118206339
CKLARGKVAM	10	Unmodified	_CKLARGKVAM_					0	0	0			REV__ENSG00000197748|ENST00000357060|CFAP43	REV__ENSG00000197748|ENST00000357060|CFAP43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.8067016601562	2	538.806996	1075.59944	-1.4886	-0.00080208	0.95382	0.00051392	-0.5348	-0.00028815	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.71042	1	8971	8971		44.117	1.7207	1	783690	+		3606	23265	2350	2353	4184	4184					0.0646642871865879
CKLFRTVK	8	Unmodified	_CKLFRTVK_					0	0	0			REV__ENST00000519180.1_1_5:178349154-178349586:+|nuORF	REV__ENST00000519180.1_1_5:178349154-178349586:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.79498291015625	2	497.796955	993.579357	-0.66885	-0.00033295	-1.4191	-0.00070643	-2.088	-0.0010394	497.7958642477004	48.816	1.5297	48.791	47.88	49.41	-0.025112					123	35	4	0	0	0	0.8621	1	4183	4183		26.693	1.2427	1	502690	+		3607	28073	2351	2354	4185	4185					0.08231001050330633
CKLLEKQL	8	Unmodified	_CKLLEKQL_					0	0	0			REV__ENST00000526500.5_1_11:111859671-111889757:+|nuORF	REV__ENST00000526500.5_1_11:111859671-111889757:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7906494140625	2	487.788795	973.563038	0.84663	0.00041298	2.8765	0.0014031	3.7232	0.0018161	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.87479	1	8734	8734		30.504	1.3541	1	2238600	+		3608	28208	2352	2355	4186	4186					0.0751987509358969
CKLLLKHGA	9	Unmodified	_CKLLLKHGA_					0	0	0		ENSG00000173273|ENST00000310430|TNKS	ENSG00000173273|ENST00000310430|TNKS	ENSG00000173273|ENST00000310430|TNKS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958984375	2	491.796955	981.579357	-1.5463	-0.00076044	-0.86884	-0.00042729	-2.4151	-0.0011877	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.72402	1	4087	4087		38.806	3.1879	1	1240000			3609	6847	2353	2356	4187	4187					0.08783001050346684
CKLLLKHGA	9	Unmodified	_CKLLLKHGA_					0	0	0		ENSG00000173273|ENST00000310430|TNKS	ENSG00000173273|ENST00000310430|TNKS	ENSG00000173273|ENST00000310430|TNKS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7950134277344	2	491.796955	981.579357	-2.0246	-0.0009957	-0.84007	-0.00041315	-2.8647	-0.0014088	491.79643169128343	45.478	1.3283	45.474	44.66	45.989	-0.0041618					90	30	4	0	0	0	0.7932	1	3661	3661		24.203	4.8428	1	433340			3610	6847	2353	2356	4188	4188					0.08783001050346684
CKLVKLPN	8	Unmodified	_CKLVKLPN_					0	0	0			REV__ENSG00000181552|ENST00000326783|EDDM3B	REV__ENSG00000181552|ENST00000326783|EDDM3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.759765625	2	457.778231	913.541908	0.54492	0.00024945	-0.39381	-0.00018028	0.15111	6.9173E-05	457.77810968877066	29.121	0.90037	28.948	28.547	29.448	-0.17336					33	20	3	0	0	0	0.4196	1	1805	1805		25.45	10.786	1	99584	+		3611	22466	2354	2357	4189	4189					0.08167909784719996
CKNKKAVR	8	Unmodified	_CKNKKAVR_					0	0	0		L1M5_dup25852|chr8:27806947-27807562:-|1.0541310341095722|0.0589088323365446|4.16|63.0|4|1|sense	L1M5_dup25852|chr8:27806947-27807562:-|1.0541310341095722|0.0589088323365446|4.16|63.0|4|1|sense	L1M5_dup25852|chr8:27806947-27807562:-|1.0541310341095722|0.0589088323365446|4.16|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.7821044921875	2	473.784379	945.554204	-0.66538	-0.00031525	-2.8948	-0.0013715	-3.5602	-0.0016867	473.78284544270895	18.667	0.51439	18.046	17.813	18.327	-0.62141					18	11	2	0	0	0	0.87922	1	430	430		31.955	2.8053	1	131450			3612	14528	2355	2358	4190	4190					0.07924946247771913
CKNVALII	8	Unmodified	_CKNVALII_					0	0	0			REV__ENSG00000085760|ENST00000263629|MTIF2	REV__ENSG00000085760|ENST00000263629|MTIF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2658386230469	2	437.264956	872.515359	-2.1366	-0.00093428	3.8525	0.0016846	1.7158	0.00075028	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.81548	1	709	709		20.482	0	1	999210	+		3613	16897	2356	2359	4191	4191					0.0740022089340755
CKPLGNCQVMM	11	Unmodified	_CKPLGNCQVMM_					0	0	0		ENST00000549143.5_1_12:56665515-56665584:-|nuORF	ENST00000549143.5_1_12:56665515-56665584:-|nuORF	ENST00000549143.5_1_12:56665515-56665584:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3328857421875	2	612.273815	1222.53308	0.37384	0.00022889	-0.99266	-0.00060778	-0.61883	-0.00037889	612.2728685291265	78.489	0.36183	78.436	78.195	78.556	-0.053558					14	9	2	0	0	0	0.17564	1	7828	7828		27.882	7.8855	1	39769			3614	13630	2357	2360	4192	4192					-0.0692889122994984
CKPLKIVR	8	Unmodified	_CKPLKIVR_					0	0	0			REV__ENST00000395841.6_1_20:55931574-55941920:+|nuORF	REV__ENST00000395841.6_1_20:55931574-55941920:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.8059387207031	2	478.807322	955.600092	0.22693	0.00010865	-2.3074	-0.0011048	-2.0804	-0.00099613	478.8061448766097	39.22	1.8064	39.308	38.205	40.011	0.088375					88	52	2	0	0	0	0.84341	1	2416	2416		24.203	3.7209	1	295310	+		3615	26124	2358	2361	4193	4193					0.12051591429997188
CKPLKIVR	8	Unmodified	_CKPLKIVR_					0	0	0			REV__ENST00000395841.6_1_20:55931574-55941920:+|nuORF	REV__ENST00000395841.6_1_20:55931574-55941920:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8067321777344	2	478.807322	955.600092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.58	1	39.532	39.032	40.032	-0.04789								0	0	0	0.3037	1	2437	2437		18.324	6.1176	1		+		3616	26124	2358	2361	4194	4194					0.12051591429997188
CKPPPDIR	8	Unmodified	_CKPPPDIR_					0	0	0		ENSG00000123838|ENST00000367070|C4BPA	ENSG00000123838|ENST00000367070|C4BPA	ENSG00000123838|ENST00000367070|C4BPA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.25640869140625	2	463.249837	924.485122	-0.06051	-2.8031E-05	-0.67978	-0.00031491	-0.74029	-0.00034294	463.24944035338217	50.377	0.53362	50.825	50.515	51.049	0.44761					20	12	2	0	0	0	0.4196	1	4951	4951		37.159	12.956	1	475230			3617	3291	2359	2362	4195	4195					0.01985862228195856
CKQHFIYTL	9	Unmodified	_CKQHFIYTL_					0	0	0		chr2:162147514-162148135|16|2335.19|0.0|27.8|-|1|TE_info:L1ME4a,L1ME4a_dup4813,L1,LINE,donor,+,162148135,162148554|GCG,None|3	chr2:162147514-162148135|16|2335.19|0.0|27.8|-|1|TE_info:L1ME4a,L1ME4a_dup4813,L1,LINE,donor,+,162148135,162148554|GCG,None|3	chr2:162147514-162148135|16|2335.19|0.0|27.8|-|1|TE_info:L1ME4a,L1ME4a_dup4813,L1,LINE,donor,+,162148135,162148554|GCG,None|3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3101806640625	2	576.797152	1151.57975	-0.53614	-0.00030924	-2.0385	-0.0011758	-2.5747	-0.0014851	576.7938599346348	74.952	0.89621	75.516	74.927	75.823	0.56458					29	21	2	0	0	0	0.20789	1	8438	8438		19.997	0	1	120390			3618	308	2360	2363	4196	4196					0.010023759795558362
CKSFIRLGR	9	Unmodified	_CKSFIRLGR_					0	0	0			REV__ENST00000556639.5_1_14:90302986-90416480:-|nuORF	REV__ENST00000556639.5_1_14:90302986-90416480:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3117065429688	2	540.310761	1078.60697	1.0096	0.00054552	0.52346	0.00028283	1.5331	0.00082835	540.3108265870129	17.184	0.38091	17.102	16.966	17.347	-0.0821					33	15	3	0	0	0	0.47272	1	209	209		53.351	7.3995	1	134770	+		3619	28704	2361	2364	4197	4197					0.07080904310578262
CKSLKIFR	8	Unmodified	_CKSLKIFR_					0	0	0		ENSG00000204856|ENST00000377673|FAM216A	ENSG00000204856|ENST00000377673|FAM216A	ENSG00000204856|ENST00000377673|FAM216A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.7955017089844	2	497.796955	993.579357	-0.66885	-0.00033295	-1.4191	-0.00070643	-2.088	-0.0010394	497.7958642477004	48.816	1.5297	48.791	47.88	49.41	-0.025112					123	35	4	0	0	0	0.84341	1	4059	4059		24.203	2.5004	1	502690			3620	8492	2362	2365	4198	4198					0.08231001050330633
CKTVFVGGL	9	Unmodified	_CKTVFVGGL_					0	0	0		ENSG00000120658|ENST00000690772|ENOX1;ENST00000482207.1_1_13:43933927-43935475:-|nuORF;ENSG00000165675|ENST00000394363|ENOX2;nc|ENSG00000165675|Q16206|ENOX2	ENSG00000120658|ENST00000690772|ENOX1	ENSG00000120658|ENST00000690772|ENOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	462.2560119628906	2	462.254588	922.494624	-0.015062	-6.9626E-06	2.4085	0.0011133	2.3934	0.0011064	462.2554929256428	50.74	1.3088	50.738	50.349	51.657	-0.0020447					51	36	2	0	0	0	0.78983	1	4296	4296		27.882	1.0861	1	155350			3621	3140	2363	2366	4199	4199					0.030276305137363124
CKVFRKTRKS	10	Unmodified	_CKVFRKTRKS_					0	0	0		ENST00000482932.5_1_1:156377658-156383882:-|nuORF	ENST00000482932.5_1_1:156377658-156383882:-|nuORF	ENST00000482932.5_1_1:156377658-156383882:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.25335693359375	3	418.248408	1251.72339	0.14948	6.2521E-05	1.6891	0.00070646	1.8386	0.00076898	418.24877617455115	35.832	0.67265	35.935	35.721	36.393	0.10306					35	21	2	0	0	0	0.37624	1	1917	1917		34.087	14.824	1	74724			3622	12497	2364	2367	4200	4200					0.10760222810472442
CKVFRKTRKS	10	Unmodified	_CKVFRKTRKS_					0	0	0		ENST00000482932.5_1_1:156377658-156383882:-|nuORF	ENST00000482932.5_1_1:156377658-156383882:-|nuORF	ENST00000482932.5_1_1:156377658-156383882:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.25335693359375	3	418.248408	1251.72339	-0.043549	-1.8214E-05	1.6741	0.00070019	1.6305	0.00068197	418.24895118036636	35.762	0.88089	35.701	35.527	36.408	-0.060337					31	24	2	0	0	0	0.37624	1	1896	1896		21.78	0	1	84714			3623	12497	2364	2367	4201	4201					0.10760222810472442
CKVNQTLKQVI	11	Unmodified	_CKVNQTLKQVI_					0	0	0		ENSG00000152527|ENST00000282406|PLEKHH2;nc|ENSG00000152527|Q8IVE3-2|PLEKHH2	ENSG00000152527|ENST00000282406|PLEKHH2	ENSG00000152527|ENST00000282406|PLEKHH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.3687133789062	2	637.368472	1272.72239	1.5361	0.00097909	1.6779	0.0010695	3.2141	0.0020485	637.3694440717433	105.45	2.1927	105.61	104.92	107.11	0.15924					169	54	4	0	0	0	0.72739	1	11257	11257		27.047	4.4677	1	2533600			3624	5181	2365	2368	4202	4202					0.09693963650920523
CKVNQTLKQVI	11	Unmodified	_CKVNQTLKQVI_					0	0	0		ENSG00000152527|ENST00000282406|PLEKHH2;nc|ENSG00000152527|Q8IVE3-2|PLEKHH2	ENSG00000152527|ENST00000282406|PLEKHH2	ENSG00000152527|ENST00000282406|PLEKHH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	637.3679809570312	2	637.368472	1272.72239	0.93683	0.0005971	2.1969	0.0014002	3.1337	0.0019973	637.3697894840569	105.65	2.5352	105.76	104.94	107.48	0.10766					185	62	4	0	0	0	0.75164	1	11269	11269		21.686	0.8486	1	2641200			3625	5181	2365	2368	4203	4203					0.09693963650920523
CLAEAPDH	8	Unmodified	_CLAEAPDH_					0	0	0			REV__ENSG00000175175|ENST00000308249|PPM1E	REV__ENSG00000175175|ENST00000308249|PPM1E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.1889953613281	2	428.186903	854.359253	1.3941	0.00059693	3.0677	0.0013135	4.4618	0.0019105	428.18814561679375	93.816	1.6244	94.257	93.23	94.854	0.441					80	42	2	0	0	0	0.86288	1	11206	11206		26.796	1.3459	1	1318500	+		3626	22045	2366	2369	4204	4204					-0.07375269347892299
CLAIIIFMNFA	11	Unmodified	_CLAIIIFMNFA_					0	0	0			REV__nc|ENSG00000183023|P32418-3|SLC8A1	REV__nc|ENSG00000183023|P32418-3|SLC8A1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	628.3277587890625	2	628.332513	1254.65047	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.082	1	49.99	49.49	50.49	-0.091797								0	0	0	0.56276	1	3915	3915		34.173	2.6427	1		+		3627	22568	2367	2370	4205	4205					0.033333329728520766
CLALKHLKG	9	Unmodified	_CLALKHLKG_					0	0	0		nc|ENSG00000042062|Q96MK2|RIPOR3;ENSG00000042062|ENST00000327979|RIPOR3	nc|ENSG00000042062|Q96MK2|RIPOR3	nc|ENSG00000042062|Q96MK2|RIPOR3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7955627441406	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.044	1	59.037	58.537	59.537	-0.0074387								0	0	0	0.31828	1	5050	5050		24.203	1.1603	1				3628	935	2368	2371	4206	4206					0.08783001050335315
CLALLTHLG	9	Unmodified	_CLALLTHLG_					0	0	0			REV__nc|ENSG00000183530|Q5THK1-2|PRR14L	REV__nc|ENSG00000183530|Q5THK1-2|PRR14L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.76959228515625	2	470.767863	939.521173	-0.63239	-0.00029771	3.0027	0.0014136	2.3703	0.0011159	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.76996	1	4846	4846		33.516	1.5607	1	1468500	+		3629	22612	2369	2372	4207	4207					0.048993194050581224
CLCFHVQRHGY	11	Unmodified	_CLCFHVQRHGY_					0	0	0		ENST00000287396.2_1_8:124515615-124544254:-|nuORF	ENST00000287396.2_1_8:124515615-124544254:-|nuORF	ENST00000287396.2_1_8:124515615-124544254:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	454.22601318359375	3	454.877986	1361.61213	-1.2039	-0.00054761	-4.2533	-0.0019347	-5.4572	-0.0024823	455.2092888875659	79.901	0.095024	80.032	79.96	80.055	0.13086					4	2	2	0	0	0	0.17606	1	7588	7588		14.086	3.9821	1	27542			3630	9657	2370	2373	4208	4208					-0.054211598891015456
CLCIYHKG	8	Unmodified	_CLCIYHKG_					0	0	0		ENSG00000180233|ENST00000323037|ZNRF2	ENSG00000180233|ENST00000323037|ZNRF2	ENSG00000180233|ENST00000323037|ZNRF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.7234191894531	2	468.725141	935.435729	-0.97836	-0.00045858	-2.8459	-0.0013339	-3.8242	-0.0017925	468.72380700596386	90.622	0.66643	90.84	90.551	91.217	0.21736					37	16	4	0	0	0	0.87276	1	9098	9098		29.842	0.69198	1	725090			3631	7318	2371	2374	4209	4209					-0.03457169052239806
CLDGSDEDDC	10	Unmodified	_CLDGSDEDDC_					0	0	0		ENSG00000157131|ENST00000361249|C8A	ENSG00000157131|ENST00000361249|C8A	ENSG00000157131|ENST00000361249|C8A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.165283203125	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.445	1	40.526	40.026	41.026	0.081345								0	0	0	0.45132	1	2568	2568		10.265	0.080485	1				3632	5413	2372	2375	4210	4210					-0.21549077329109423
CLDSLIDGY	9	Unmodified	_CLDSLIDGY_					0	0	0			REV__nc|ENSG00000166411|P50213-2|IDH3A	REV__nc|ENSG00000166411|P50213-2|IDH3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.7286682128906	2	499.7286	997.442648	-0.068469	-3.4216E-05	-0.097404	-4.8675E-05	-0.16587	-8.2891E-05	499.72846689901934	73.394	0.4699	73.434	73.104	73.574	0.040024					29	18	2	0	0	0	0.43338	1	7012	7012		55.504	14.932	1	214570	+		3633	21291	2373	2376	4211	4211					-0.05617577690679809
CLDSLIDGY	9	Unmodified	_CLDSLIDGY_					0	0	0			REV__nc|ENSG00000166411|P50213-2|IDH3A	REV__nc|ENSG00000166411|P50213-2|IDH3A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	499.7286	997.442648	-0.068469	-3.4216E-05	-0.097404	-4.8675E-05	-0.16587	-8.2891E-05	499.72846689901934	73.394	0.4699	73.434	73.104	73.574	0.040024	0.13419	-0.00070946	NaN	55.504	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	214570	+		3634	21291	2373	2376							-0.05617577690679809
CLDSLIDGY	9	Unmodified	_CLDSLIDGY_					0	0	0			REV__nc|ENSG00000166411|P50213-2|IDH3A	REV__nc|ENSG00000166411|P50213-2|IDH3A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	499.7286	997.442648	-0.45613	-0.00022794	0.56438	0.00028204	0.10825	5.4093E-05	499.7286925165346	73.379	0.46216	73.337	72.952	73.414	-0.042015	0.036824	-4.8044E-05	NaN	55.504	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	268650	+		3635	21291	2373	2376							-0.05617577690679809
CLECRKAF	8	Unmodified	_CLECRKAF_					0	0	0		nc|ENSG00000196150|P15622|ZNF250;nc|ENSG00000196150|P15622-2|ZNF250;ENSG00000196150|ENST00000417550|ZNF250	nc|ENSG00000196150|P15622|ZNF250	nc|ENSG00000196150|P15622|ZNF250	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2370910644531	2	485.235873	968.457192	0.24888	0.00012076	2.8448	0.0013804	3.0937	0.0015012	485.2370223529383	77.388	1.7116	77.793	77.425	79.137	0.40531					96	40	4	0	0	0	0.36381	1	8862	8862		82.305	8.05	1	1559200			3636	15176	2374	2377	4212	4212					-0.028297840235381955
CLEDEASALR	10	Unmodified	_CLEDEASALR_					0	0	0		nc|ENSG00000157954|Q9Y4P8-3|WIPI2;nc|ENSG00000157954|Q9Y4P8-5|WIPI2;ENST00000479690.1_1_7:5269116-5270575:+|nuORF;ENST00000471851.1_1_7:5266712-5270575:+|nuORF;ENST00000466014.5_1_7:5232953-5270575:+|nuORF;nc|ENSG00000157954|Q9Y4P8-2|WIPI2;nc|ENSG00000157954|Q9Y4P8-4|WIPI2;nc|ENSG00000157954|Q9Y4P8-6|WIPI2;ENSG00000157954|ENST00000288828|WIPI2	nc|ENSG00000157954|Q9Y4P8-3|WIPI2	nc|ENSG00000157954|Q9Y4P8-3|WIPI2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.76220703125	2	553.760963	1105.50737	0.82081	0.00045453	-0.45597	-0.0002525	0.36484	0.00020204	553.7601341760092	30.255	0.51008	30.239	29.891	30.401	-0.015165					18	11	2	0	0	0	0.77314	1	1582	1582		40.778	1.5253	1	27647			3637	15025	2375	2378	4213	4213					-0.04116002884711634
CLELILARRAC	11	Unmodified	_CLELILARRAC_					0	0	0		ENST00000373622.9_1_20:35807565-35812612:+|nuORF	ENST00000373622.9_1_20:35807565-35812612:+|nuORF	ENST00000373622.9_1_20:35807565-35812612:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	630.8490600585938	2	630.849393	1259.68423	-1.1888	-0.00074997	1.3463	0.00084932	0.15749	9.9353E-05	630.8500523700144	110.47	0.76814	110.46	110.16	110.92	-0.0074387					58	23	5	0	0	0	0.65746	1	11784	11784		37.812	2.6595	1	2040200			3638	10748	2376	2379	4214	4214					0.06477754464617647
CLERKGPV	8	Unmodified	_CLERKGPV_					0	0	0		ENST00000268097.9_1_15:72636250-72636385:-|nuORF	ENST00000268097.9_1_15:72636250-72636385:-|nuORF	ENST00000268097.9_1_15:72636250-72636385:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.2486572265625	2	451.249837	900.485122	0.1709	7.7119E-05	-2.215	-0.00099951	-2.0441	-0.0009224	451.24869628583264	62.968	1.2225	63.523	62.907	64.129	0.55449					64	28	3	0	0	0	0.88915	1	6789	6789		35.201	0	1	464750			3639	9535	2377	2380	4215	4215					0.03089862228216589
CLESVTIGD	9	Unmodified	_CLESVTIGD_					0	0	0		nc|ENSG00000162782|Q8NAT2|TDRD5;ENSG00000162782|ENST00000444136|TDRD5	nc|ENSG00000162782|Q8NAT2|TDRD5	nc|ENSG00000162782|Q8NAT2|TDRD5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7265319824219	2	468.720775	935.426998	3.3572	0.0015736	2.301	0.0010785	5.6582	0.0026521	468.721690644152	105.13	1.3066	105.36	104.6	105.91	0.22681					63	31	3	0	0	0	0.77546	1	12899	12899		31.955	5.2619	1	868630			3640	5738	2378	2381	4216	4216					-0.04329864207727496
CLETGIVSD	9	Unmodified	_CLETGIVSD_					0	0	0			REV__nc|nan|A6NFR6|C5orf60;REV__nc|nan|A6NFR6-3|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.72576904296875	2	468.720775	935.426998	3.3572	0.0015736	2.301	0.0010785	5.6582	0.0026521	468.721690644152	105.13	1.3066	105.36	104.6	105.91	0.22681					63	31	3	0	0	0	0.78536	1	12852	12852		29.15	2.3535	1	868630	+		3641	30324;30323	2379	2382	4217	4217					-0.04329864207727496
CLETIPKHLQ	10	Unmodified	_CLETIPKHLQ_					0	0	0			REV__ENSG00000248905|ENST00000616417|FMN1	REV__ENSG00000248905|ENST00000616417|FMN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	591.3184814453125	2	591.320991	1180.62743	0.58504	0.00034595	-2.3662	-0.0013992	-1.7812	-0.0010532	591.3198270351554	66.674	0.81735	66.801	66.48	67.297	0.1265					65	36	2	0	0	0	0.77314	1	5954	5954		40.778	4.3314	1	190160	+		3642	23863	2380	2383	4218	4218					0.044340301797319626
CLGKHLAKL	9	Unmodified	_CLGKHLAKL_					0	0	0		nc|ENSG00000003137|Q9NR63-2|CYP26B1;nc|ENSG00000003137|Q9NR63-3|CYP26B1;ENSG00000003137|ENST00000001146|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7955017089844	2	491.796955	981.579357	0.29464	0.0001449	-2.8698	-0.0014114	-2.5751	-0.0012664	491.7954245147593	45.248	1.2335	45.291	44.693	45.927	0.042599					75	30	3	0	0	0	0.7932	1	3283	3283		26.796	5.0938	1	440250			3643	656	2381	2384	4219	4219					0.08783001050335315
CLGKHLAKL	9	Unmodified	_CLGKHLAKL_					0	0	0		nc|ENSG00000003137|Q9NR63-2|CYP26B1;nc|ENSG00000003137|Q9NR63-3|CYP26B1;ENSG00000003137|ENST00000001146|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7953796386719	2	491.796955	981.579357	0.32756	0.00016109	-2.8578	-0.0014055	-2.5302	-0.0012444	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.7932	1	3855	3855		24.203	2.2429	1	1346800			3644	656	2381	2384	4220	4220					0.08783001050335315
CLGKHLAKL	9	Unmodified	_CLGKHLAKL_					0	0	0		nc|ENSG00000003137|Q9NR63-2|CYP26B1;nc|ENSG00000003137|Q9NR63-3|CYP26B1;ENSG00000003137|ENST00000001146|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79583740234375	2	491.796955	981.579357	-0.22794	-0.0001121	-2.3551	-0.0011582	-2.583	-0.0012703	491.795700180553	50.73	2.2718	51.177	50.348	52.62	0.4476					135	54	3	0	0	0	0.78058	1	5047	5047		30.504	7.4612	1	1342800			3645	656	2381	2384	4221	4221					0.08783001050335315
CLGKHLAKL	9	Unmodified	_CLGKHLAKL_					0	0	0		nc|ENSG00000003137|Q9NR63-2|CYP26B1;nc|ENSG00000003137|Q9NR63-3|CYP26B1;ENSG00000003137|ENST00000001146|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7894287109375	2	491.796955	981.579357	-1.9178	-0.00094317	-2.7431	-0.0013491	-4.6609	-0.0022922	491.795512765235	43.373	1.1256	44.147	43.54	44.665	0.77379					67	27	3	0	0	0	0.78058	1	3928	3928		30.504	5.0535	1	1540600			3646	656	2381	2384	4222	4222					0.08783001050335315
CLGLPMPL	8	Unmodified	_CLGLPMPL_					0	0	0			REV__ENSG00000145975|ENST00000274673|FAM217A	REV__ENSG00000145975|ENST00000274673|FAM217A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.22784423828125	2	422.226985	842.439417	-0.032306	-1.364E-05	1.895	0.00080012	1.8627	0.00078648	422.2276832627875	61.725	1.2193	61.692	61.376	62.595	-0.033173					71	53	2	0	0	0	0.84567	1	5848	5848		24.504	1.4615	1	435140	+		3647	19979	2382	2385	4223	4223					0.011895007216025988
CLGPLYCLRY	10	Unmodified	_CLGPLYCLRY_					0	0	0		ENST00000549588.5_1_12:60098582-60157842:+|nuORF	ENST00000549588.5_1_12:60098582-60157842:+|nuORF	ENST00000549588.5_1_12:60098582-60157842:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	600.7976684570312	2	600.798837	1199.58312	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.804	1	60.835	60.335	61.335	0.0312								0	0	0	0.45132	1	5676	5676		53.351	0	1				3648	13640	2383	2386	4224	4224					-0.00868697238115601
CLHGQCIYLV	10	Unmodified	_CLHGQCIYLV_					0	0	0		ENST00000507603.1_1_4:75230965-75246855:+|nuORF;ENSG00000124882|ENST00000244869|EREG	ENST00000507603.1_1_4:75230965-75246855:+|nuORF	ENST00000507603.1_1_4:75230965-75246855:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2954711914062	2	574.783187	1147.55182	-0.62575	-0.00035967	2.9488	0.0016949	2.3231	0.0013353	575.284941522103	75.356	0.50449	75.751	75.489	75.994	0.39507					23	11	3	0	0	0	0.37624	1	8550	8550		29.15	4.9468	1	385890			3649	3367	2384	2387	4225	4225					-0.016052702722390677
CLHIQLKSQ	9	Unmodified	_CLHIQLKSQ_					0	0	0			REV__nc|ENSG00000168944|Q8N960-2|CEP120	REV__nc|ENSG00000168944|Q8N960-2|CEP120	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.29345703125	2	535.294776	1068.575	-0.14794	-7.919E-05	-2.8105	-0.0015044	-2.9584	-0.0015836	535.2931287950377	26.772	0.5403	26.597	26.341	26.881	-0.17559					28	11	3	0	0	0	0.78058	1	1481	1481		30.504	2.6214	1	202840	+		3650	21538	2385	2388	4226	4226					0.04345491836761539
CLHLISRSTLC	11	Unmodified	_CLHLISRSTLC_					0	0	0			REV__ENST00000495820.5_1_2:182982086-182982179:+|nuORF	REV__ENST00000495820.5_1_2:182982086-182982179:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	623.341064453125	2	623.32575	1244.63695	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.505	1	94.703	94.203	95.203	0.19827								0	0	0	0.56276	1	9600	9600		36.447	4.9169	1		+		3651	27743	2386	2389	4227	4227					0.024414751936092216
CLHLKCNFF	9	Unmodified	_CLHLKCNFF_					0	0	0		ENST00000266659.7_2_12:75893342-75893732:+|nuORF	ENST00000266659.7_2_12:75893342-75893732:+|nuORF	ENST00000266659.7_2_12:75893342-75893732:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	562.772216796875	2	562.772622	1123.53069	0.1168	6.573E-05	2.2016	0.001239	2.3184	0.0013047	562.7737807030672	63.866	0.63213	63.831	63.511	64.143	-0.034256					41	19	3	0	0	0	0.69914	1	6075	6075		40.573	3.4135	1	236840			3652	9524	2387	2390	4228	4228					-0.026132355810659647
CLHLVILLH	9	Unmodified	_CLHLVILLH_					0	0	0		ENST00000435675.5_1_2:216198165-216200773:+|nuORF	ENST00000435675.5_1_2:216198165-216200773:+|nuORF	ENST00000435675.5_1_2:216198165-216200773:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8209838867188	2	530.82043	1059.62631	-0.81981	-0.00043517	-3.1247	-0.0016587	-3.9445	-0.0020938	531.3179945463662	84.982	1.0952	84.982	84.395	85.49	0					45	24	2	0	0	0	0.78292	1	8052	8052		29.842	5.6388	1	216850			3653	11713	2388	2391	4229	4229					0.09887860601497778
CLHLVILLH	9	Unmodified	_CLHLVILLH_					0	0	0		ENST00000435675.5_1_2:216198165-216200773:+|nuORF	ENST00000435675.5_1_2:216198165-216200773:+|nuORF	ENST00000435675.5_1_2:216198165-216200773:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8201904296875	2	530.82043	1059.62631	-1.2397	-0.00065807	2.0603	0.0010936	0.82054	0.00043556	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.78292	1	7560	7560		29.842	0	1	869100			3654	11713	2388	2391	4230	4230					0.09887860601497778
CLKIAVYF	8	Unmodified	_CLKIAVYF_					0	0	0		ENST00000267615.10_1_14:93406548-93406620:-|nuORF	ENST00000267615.10_1_14:93406548-93406620:-|nuORF	ENST00000267615.10_1_14:93406548-93406620:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80511474609375	2	478.767332	955.52011	0.29911	0.00014321	-0.58079	-0.00027806	-0.28167	-0.00013486	478.76649408727656	41.663	0.56519	41.632	41.303	41.868	-0.030991					15	13	2	0	0	0	0.4196	1	3020	3020		46.766	25.064	1	75336			3655	9529	2389	2392	4231	4231					0.04057105036156372
CLKWNQKLPN	10	Unmodified	_CLKWNQKLPN_					0	0	0		nc|ENSG00000100697|Q9UPY3-2|DICER1	nc|ENSG00000100697|Q9UPY3-2|DICER1	nc|ENSG00000100697|Q9UPY3-2|DICER1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3364868164062	2	622.334433	1242.65431	2.9643	0.0018448	0.18551	0.00011545	3.1498	0.0019602	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.85694	1	12326	12326		21.96	3.6978	1	435720			3656	14817	2390	2393	4232	4232					0.042691387909144396
CLLCGKTFTQK	11	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))LLC(Carbamidomethyl (C))GKTFTQK_	C(1)LLC(1)GKTFTQK		C(54)LLC(54)GKTFTQK		0	2	0		ENSG00000171448|ENST00000373656|ZBTB26	ENSG00000171448|ENST00000373656|ZBTB26	ENSG00000171448|ENST00000373656|ZBTB26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.5652770996094	3	452.565186	1354.67373	0.034982	1.5832E-05	0.46687	0.00021129	0.50186	0.00022712	452.56530230982224	17.693	0.38687	17.755	17.623	18.01	0.062603					49	20	3	0	0	0	0.47591	1	268	268		53.597	6.3692	1	505310			3657	6663	2391	2394	4233	4233	82;83				0.010577270195199162
CLLGRAAQAQ	10	Unmodified	_CLLGRAAQAQ_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1;nc|ENSG00000077942|P23142-2|FBLN1;nc|ENSG00000077942|P23142-3|FBLN1;CON__ENSEMBL:ENSBTAP00000016046	nc|ENSG00000077942|P23142-4|FBLN1;CON__ENSEMBL:ENSBTAP00000016046	CON__ENSEMBL:ENSBTAP00000016046	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	515.7796630859375	2	515.776751	1029.53895	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.379	1	18.454	17.954	18.954	0.075441								0	0	0	0.45132	1	283	283		27.882	0	1			+	3658	14782;564	2392	2395	4234	4234					0.025360346599200057
CLLKELKHK	9	Unmodified	_CLLKELKHK_					0	0	0		ENST00000442838.2_1_8:123781530-123781986:+|nuORF;ENST00000469108.1_1_7:150753939-150754935:-|nuORF;ENSG00000164885|ENST00000485972|CDK5;nc|ENSG00000164885|Q00535-2|CDK5	ENST00000442838.2_1_8:123781530-123781986:+|nuORF;ENSG00000164885|ENST00000485972|CDK5	ENSG00000164885|ENST00000485972|CDK5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	556.0567626953125	2	556.336444	1110.65834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.146	1	70.275	69.775	70.775	0.1291								0	0	0	0.28386	1	6370	6370		37.159	2.0071	1				3659	6016;11797	2393	2396	4235	4235					0.10743228284627548
CLLLALFF	8	Unmodified	_CLLLALFF_					0	0	0			REV__ENSG00000017483|ENST00000620913|SLC38A5	REV__ENSG00000017483|ENST00000620913|SLC38A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.2688903808594	2	470.27225	938.529947	1.0926	0.00051384	-1.313	-0.00061747	-0.22037	-0.00010363	470.27159576530556	91.919	2.3675	92.368	91.756	94.123	0.44959					104	55	3	0	0	0	0.84567	1	10916	10916		24.504	0.30126	1	778610	+		3660	16220	2394	2397	4236	4236					0.05822293041535431
CLLMEHASVAW	11	Unmodified	_CLLMEHASVAW_					0	0	0		ENST00000407073.5_2_2:149216331-149221335:+|nuORF	ENST00000407073.5_2_2:149216331-149221335:+|nuORF	ENST00000407073.5_2_2:149216331-149221335:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	630.2966918945312	2	630.299201	1258.58385	-0.23568	-0.00014855	-3.5394	-0.0022309	-3.7751	-0.0023794	630.2969318273362	23.876	1.3048	23.827	23.49	24.795	-0.049152					78	30	4	0	0	0	0.67493	1	857	857		35.618	1.4457	1	407500			3661	11282	2395	2398	4237	4237					-0.03509902589075864
CLLPGPQPV	9	Unmodified	_CLLPGPQPV_					0	0	0			REV__ENST00000481499.5_1_6:43028310-43029102:+|nuORF	REV__ENST00000481499.5_1_6:43028310-43029102:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	462.25665283203125	2	462.254588	922.494624	-1.1479	-0.0005306	3.7205	0.0017198	2.5727	0.0011892	462.2561316010427	50.7	0.93532	50.73	50.218	51.154	0.029629					48	30	3	0	0	0	0.64338	1	3986	3986		44.531	3.9584	1	309990	+		3662	27444	2396	2399	4238	4238					0.030276305137249437
CLLRKLLKF	9	Unmodified	_CLLRKLLKF_					0	0	0			REV__ENST00000428135.7_1_7:17833628-17833766:-|nuORF	REV__ENST00000428135.7_1_7:17833628-17833766:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3632202148438	2	567.365004	1132.71546	-0.87429	-0.00049604	-1.7403	-0.00098738	-2.6146	-0.0014834	567.3638800486743	44.538	2.1986	44.515	43.895	46.093	-0.023079					155	51	5	0	0	0	0.7932	1	3455	3455		18.324	0.95945	1	2273000	+		3663	26579	2397	2400	4239	4239					0.15440695561005668
CLLRLNVVP	9	Unmodified	_CLLRLNVVP_					0	0	0		nc|ENSG00000154639|P78310-2|CXADR;nc|ENSG00000154639|P78310-6|CXADR;ENSG00000154639|ENST00000284878|CXADR	nc|ENSG00000154639|P78310-2|CXADR	nc|ENSG00000154639|P78310-2|CXADR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.80908203125	2	513.810062	1025.60557	0.14837	7.6233E-05	-2.2121	-0.0011366	-2.0637	-0.0010603	513.8088134492856	48.067	1.4161	48.057	47.714	49.13	-0.0093269					122	36	4	0	0	0	0.76996	1	3975	3975		33.516	3.0119	1	1557500			3664	5286	2398	2401	4240	4240					0.09379270221802471
CLLTANEGELY	11	Unmodified	_CLLTANEGELY_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	613.2910766601562	2	613.292096	1224.56964	-1.3794	-0.000846	-0.79696	-0.00048877	-2.1764	-0.0013348	613.2915277669886	62.628	1.114	62.656	62.34	63.454	0.028133					142	52	4	0	0	0	0.11202	1	5842	5842		90.601	11.15	1	983250	+		3665	21199	2399	2402	4241	4241					-0.03366276536348778
CLLTANEGELY	11	Unmodified	_CLLTANEGELY_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	613.292096	1224.56964	-1.3794	-0.000846	-0.79696	-0.00048877	-2.1764	-0.0013348	613.2915277669886	62.628	1.114	62.656	62.34	63.454	0.028133	-0.037365	0.0013228	NaN	90.601	142	52	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	983250	+		3666	21199	2399	2402							-0.03366276536348778
CLLTANEGELY	11	Unmodified	_CLLTANEGELY_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	613.292096	1224.56964	1.1096	0.0006805	-3.4481	-0.0021147	-2.3385	-0.0014342	613.2899007318308	62.567	0.55157	62.681	62.452	63.003	0.11389	-0.012441	-0.001929	NaN	90.601	61	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	291270	+		3667	21199	2399	2402							-0.03366276536348778
CLLTANEGELY	11	Unmodified	_CLLTANEGELY_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	613.292096	1224.56964	0.56892	0.00034891	-2.8629	-0.0017558	-2.294	-0.0014069	613.2903053415371	62.567	0.5937	62.688	62.419	63.013	0.1209	-0.005518	-0.0012113	NaN	90.601	65	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	279370	+		3668	21199	2399	2402							-0.03366276536348778
CLLTANEGELY	11	Unmodified	_CLLTANEGELY_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	613.292096	1224.56964	-0.34877	-0.0002139	-1.8623	-0.0011422	-2.2111	-0.0013561	613.2908424075753	62.677	0.54015	62.7	62.495	63.035	0.022984	0.0066265	1.602E-05	NaN	90.601	58	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	287680	+		3669	21199	2399	2402							-0.03366276536348778
CLLTVRVLQAH	11	Unmodified	_CLLTVRVLQAH_					0	0	0		ENSG00000243708|ENST00000458483|PLA2G4B;nc|ENSG00000243708|P0C869-8|PLA2G4B;nc|ENSG00000243708|P0C869-7|PLA2G4B;nc|ENSG00000243708|P0C869-6|PLA2G4B;ENST00000461382.5_1_15:42131111-42133534:+|nuORF;ENST00000487292.1_3_15:42132349-42136005:+|nuORF;ENST00000491746.5_1_15:42132349-42135875:+|nuORF;ENST00000490848.5_1_15:42132349-42134687:+|nuORF	ENSG00000243708|ENST00000458483|PLA2G4B	ENSG00000243708|ENST00000458483|PLA2G4B	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.240234375	3	418.244664	1251.71216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.656	1	32.624	32.124	33.124	-0.032677								0	0	0	0.56276	1	1533	1533		21.78	8.8229	1				3670	8812	2400	2403	4242	4242					0.09637400716337652
CLLWTTCEVTK	11	Unmodified	_CLLWTTCEVTK_					0	0	0			REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.25482177734375	3	432.882403	1295.62538	4.954	0.0021445	2.6885	0.0011638	7.6425	0.0033083	432.8833770696476	107.44	0.70293	107.56	107.18	107.88	0.11716					47	28	2	0	0	0	0.17243	1	13136	13136		48.602	16.567	1	142250	+		3671	15561	2401	2404	4243	4243					-0.010607666204350608
CLNGTRPSWN	10	Unmodified	_CLNGTRPSWN_					0	0	0		nc|ENSG00000174938|Q6UXD5-2|SEZ6L2;nc|ENSG00000174938|Q6UXD5-3|SEZ6L2;nc|ENSG00000174938|Q6UXD5-5|SEZ6L2;nc|ENSG00000174938|Q6UXD5|SEZ6L2;ENSG00000174938|ENST00000617533|SEZ6L2;nc|ENSG00000174938|Q6UXD5-4|SEZ6L2;nc|ENSG00000174938|Q6UXD5-6|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.2675170898438	2	574.26929	1146.52403	0.84086	0.00048288	-4.3784	-0.0025144	-3.5375	-0.0020315	574.2666801981707	96.876	5.0715	97.039	94.33	99.401	0.16316					175	119	3	0	0	0	0.67571	1	10138	10138		45.972	3.5761	1	185070			3672	6973	2402	2405	4244	4244					-0.04337457208066553
CLNGTRPSWN	10	Unmodified	_CLNGTRPSWN_					0	0	0		nc|ENSG00000174938|Q6UXD5-2|SEZ6L2;nc|ENSG00000174938|Q6UXD5-3|SEZ6L2;nc|ENSG00000174938|Q6UXD5-5|SEZ6L2;nc|ENSG00000174938|Q6UXD5|SEZ6L2;ENSG00000174938|ENST00000617533|SEZ6L2;nc|ENSG00000174938|Q6UXD5-4|SEZ6L2;nc|ENSG00000174938|Q6UXD5-6|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	574.26929	1146.52403	0.59264	0.00034034	-4.2602	-0.0024465	-3.6676	-0.0021062	574.2667664713669	96.939	0.79028	97.17	96.782	97.572	0.23103	0.065243	0.00011192	NaN	45.972	34	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183950			3673	6973	2402	2405							-0.04337457208066553
CLNMCTLIYVS	11	Unmodified	_CLNMCTLIYVS_					0	0	0		ENST00000406263.5_1_7:90492567-90528666:+|nuORF	ENST00000406263.5_1_7:90492567-90528666:+|nuORF	ENST00000406263.5_1_7:90492567-90528666:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	630.2965698242188	2	630.29527	1258.57599	0.77751	0.00049006	1.8336	0.0011557	2.6111	0.0016458	630.2963652604675	23.87	1.0195	23.826	23.466	24.486	-0.043221					83	28	4	0	0	0	0.62614	1	840	840		41.427	3.6151	1	436810			3674	11269	2403	2406	4245	4245					-0.04295797900817888
CLNMCTLIYVS	11	Unmodified	_CLNMCTLIYVS_					0	0	0		ENST00000406263.5_1_7:90492567-90528666:+|nuORF	ENST00000406263.5_1_7:90492567-90528666:+|nuORF	ENST00000406263.5_1_7:90492567-90528666:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	630.3023681640625	2	630.29527	1258.57599	1.0969	0.00069134	1.728	0.0010891	2.8248	0.0017805	630.2963342926464	23.71	0.66888	23.712	23.388	24.057	0.0018959					67	32	3	0	0	0	0.60058	1	777	777		44.377	11.627	1	196440			3675	11269	2403	2406	4246	4246					-0.04295797900817888
CLNVIDALL	9	Unmodified	_CLNVIDALL_					0	0	0			REV__ENSG00000273749|ENST00000617928|CYFIP1	REV__ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.2740173339844	2	487.272978	972.531403	0.97044	0.00047287	4.3898	0.002139	5.3602	0.0026119	487.27497842050246	28.074	0.58061	27.819	27.543	28.123	-0.25465					33	13	4	0	0	0	0.7932	1	1675	1675		25.574	0	1	159730	+		3676	23992	2404	2407	4247	4247					0.044038823396363114
CLNVIDALL	9	Unmodified	_CLNVIDALL_					0	0	0			REV__ENSG00000273749|ENST00000617928|CYFIP1	REV__ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	487.272978	972.531403	0.97044	0.00047287	4.3898	0.002139	5.3602	0.0026119	487.27497842050246	28.074	0.58061	27.819	27.543	28.123	-0.25465	-0.023653	-0.00020963	NaN	25.574	33	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	159730	+		3677	23992	2404	2407							0.044038823396363114
CLPGAQFAIY	10	Unmodified	_CLPGAQFAIY_					0	0	0			REV__ENST00000275364.7_1_7:2769435-2769543:-|nuORF	REV__ENST00000275364.7_1_7:2769435-2769543:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.772216796875	2	541.770603	1081.52665	0.83771	0.00045385	1.387	0.00075145	2.2247	0.0012053	541.771205607692	27.847	0.64547	27.824	27.422	28.067	-0.023556					29	15	3	0	0	0	0.86305	1	1294	1294		31.955	2.1133	1	49361	+		3678	24571	2405	2408	4248	4248					-0.010850018031078434
CLPHIRFY	8	Unmodified	_CLPHIRFY_					0	0	0		nc|ENSG00000140848|Q96FN4-2|CPNE2;ENSG00000140848|ENST00000290776|CPNE2	nc|ENSG00000140848|Q96FN4-2|CPNE2	nc|ENSG00000140848|Q96FN4-2|CPNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.7745361328125	2	524.77348	1047.53241	0.31757	0.00016665	1.3961	0.00073266	1.7137	0.00089931	524.7742180643073	46.698	0.71379	46.694	46.413	47.127	-0.0041618					38	17	3	0	0	0	0.86791	1	3775	3775		28.254	1.207	1	419590			3679	4459	2406	2409	4249	4249					0.01054141499207617
CLPKSKGF	8	Unmodified	_CLPKSKGF_					0	0	0		chr3:109330812-109331734|22|183.82|0.27|9.4|-|2|DPPA4,DPPA4|1	chr3:109330812-109331734|22|183.82|0.27|9.4|-|2|DPPA4,DPPA4|1	chr3:109330812-109331734|22|183.82|0.27|9.4|-|2|DPPA4,DPPA4|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	439.2525939941406	2	440.241481	878.468409	-0.15661	-6.8948E-05	-2.1432	-0.00094354	-2.2998	-0.0010125	440.2404781982739	90.972	0.72055	91.042	90.513	91.234	0.069328					30	17	2	0	0	0	0.4196	1	9366	9366		18.324	5.3652	1	278210			3680	386	2407	2410	4250	4250					0.02431361342269156
CLPKSKGF	8	Unmodified	_CLPKSKGF_					0	0	0		chr3:109330812-109331734|22|183.82|0.27|9.4|-|2|DPPA4,DPPA4|1	chr3:109330812-109331734|22|183.82|0.27|9.4|-|2|DPPA4,DPPA4|1	chr3:109330812-109331734|22|183.82|0.27|9.4|-|2|DPPA4,DPPA4|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2522277832031	2	440.241481	878.468409	-1.0533	-0.00046371	-0.64113	-0.00028225	-1.6945	-0.00074597	440.24091363898367	90.557	1.0457	91.028	90.644	91.69	0.47068					36	25	2	0	0	0	0.4196	1	10788	10788		18.324	0	1	189870			3681	386	2407	2410	4251	4251					0.02431361342269156
CLPLASTT	8	Unmodified	_CLPLASTT_					0	0	0		nc|ENSG00000135636|O75923-3|DYSF;nc|ENSG00000135636|O75923-9|DYSF;nc|ENSG00000135636|O75923|DYSF;nc|ENSG00000135636|O75923-14|DYSF;nc|ENSG00000135636|O75923-6|DYSF;nc|ENSG00000135636|O75923-12|DYSF;nc|ENSG00000135636|O75923-5|DYSF;nc|ENSG00000135636|O75923-11|DYSF;nc|ENSG00000135636|O75923-4|DYSF;nc|ENSG00000135636|O75923-10|DYSF;nc|ENSG00000135636|O75923-2|DYSF;nc|ENSG00000135636|O75923-8|DYSF;nc|ENSG00000135636|O75923-7|DYSF;ENSG00000135636|ENST00000410020|DYSF;nc|ENSG00000135636|O75923-15|DYSF	nc|ENSG00000135636|O75923-3|DYSF	nc|ENSG00000135636|O75923-3|DYSF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2089538574219	2	403.209847	804.40514	-1.2088	-0.00048741	-0.91536	-0.00036908	-2.1242	-0.00085649	403.20939277352	86.047	3.2334	86.047	85.315	88.548	0					134	74	4	0	0	0	0.89457	1	8255	8255		37.028	7.1869	1	1412000			3682	4041	2408	2411	4252	4252					-0.004886241656436141
CLPRSELLFQQ	11	Carbamidomethyl (C)	_C(Carbamidomethyl (C))LPRSELLFQQ_	C(1)LPRSELLFQQ		C(59)LPRSELLFQQ		0	1	0		nc|ENSG00000196811|P07510-2|CHRNG;ENSG00000196811|ENST00000651502|CHRNG	nc|ENSG00000196811|P07510-2|CHRNG	nc|ENSG00000196811|P07510-2|CHRNG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.24176025390625	3	464.2431	1389.70747	0.29313	0.00013608	-3.0971	-0.0014378	-2.8039	-0.0013017	464.241588360812	20.059	0.60054	19.589	19.35	19.95	-0.46967					36	12	4	0	0	0	0.40952	1	601	601		58.63	10.028	1	453210			3683	8104	2409	2412	4253	4253	97				0.02820471782911227
CLQKDSEDVNH	11	Unmodified	_CLQKDSEDVNH_					0	0	0		ENSG00000085185|ENST00000540052|BCORL1;nc|ENSG00000085185|Q5H9F3-1|BCORL1;nc|ENSG00000085185|Q5H9F3-4|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	644.2888793945312	2	644.285334	1286.55611	1.4334	0.00092354	3.7458	0.0024134	5.1792	0.0033369	644.2876534496306	26.705	0.43338	26.677	26.459	26.893	-0.027706					17	8	3	0	0	0	0.69248	1	1170	1170		32.751	5.7032	1	56118			3684	1527	2410	2413	4254	4254					-0.07570134315596988
CLQMLVRY	8	Unmodified	_CLQMLVRY_					0	0	0			REV__ENSG00000198837|ENST00000361217|DENND4B	REV__ENSG00000198837|ENST00000361217|DENND4B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2811889648438	2	513.267173	1024.51979	0.46111	0.00023667	3.9699	0.0020376	4.431	0.0022743	513.269080053021	86.715	2.1049	86.771	85.932	88.037	0.055641					81	48	2	0	0	0	0.4196	1	8869	8869		44.531	28.058	1	81106	+		3685	23392	2411	2414	4255	4255					0.00851362044659254
CLRALLNLP	9	Unmodified	_CLRALLNLP_					0	0	0			REV__ENST00000374279.3_1_9:114696562-114696673:+|nuORF	REV__ENST00000374279.3_1_9:114696562-114696673:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8011474609375	2	506.802237	1011.58992	0.3226	0.0001635	-2.2414	-0.0011359	-1.9188	-0.00097245	506.80101494321997	46.369	1.6079	46.407	46.092	47.7	0.038181					96	46	3	0	0	0	0.78058	1	3439	3439		30.504	1.3541	1	231410	+		3686	25784	2412	2415	4256	4256					0.08458983704770162
CLRATPYHG	9	Unmodified	_CLRATPYHG_					0	0	0		ENST00000520757.1_1_8:96047742-96087920:+|nuORF;ENST00000517976.5_1_8:96047742-96070162:+|nuORF;nc|ENSG00000156170|Q330K2-2|NDUFAF6;ENSG00000156170|ENST00000396124|NDUFAF6	ENST00000520757.1_1_8:96047742-96087920:+|nuORF	ENST00000520757.1_1_8:96047742-96087920:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7742614746094	2	509.250369	1016.48618	0.67827	0.00034541	2.5146	0.0012805	3.1928	0.001626	509.2516149098433	74.478	0.28168	75.037	74.881	75.162	0.5589					10	6	2	0	0	0	0.20789	1	8427	8427		16.473	0	1	104320			3687	5365	2413	2416	4257	4257					-0.021399234028990577
CLRGKVTRV	9	Unmodified	_CLRGKVTRV_					0	0	0		ENST00000561122.1_1_15:57179569-57180061:-|nuORF	ENST00000561122.1_1_15:57179569-57180061:-|nuORF	ENST00000561122.1_1_15:57179569-57180061:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3133544921875	2	516.310761	1030.60697	3.1033	0.0016022	3.7624	0.0019426	6.8656	0.0035448	516.312736387189	103.55	1.1906	103.5	102.99	104.18	-0.043755					71	28	3	0	0	0	0.7932	1	11364	11364		23.523	1.5628	1	574770			3688	13827	2414	2417	4258	4258					0.0928890431059699
CLRKCVPLPL	10	Unmodified	_CLRKCVPLPL_					0	0	0			REV__nc|ENSG00000187627|P0DJD0|RGPD1	REV__nc|ENSG00000187627|P0DJD0|RGPD1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	571.5261840820312	2	571.332847	1140.65114	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.5	1	18.421	17.921	18.921	-0.078943								0	0	0	0.45132	1	329	329		40.573	10.255	1		+		3689	22758	2415	2418	4259	4259					0.08644172412573425
CLRRTGSG	8	Unmodified	_CLRRTGSG_					0	0	0		ENST00000356232.8_1_3:132379015-132379228:+|nuORF;ENST00000480955.1_1_3:132378791-132379228:+|nuORF	ENST00000356232.8_1_3:132379015-132379228:+|nuORF	ENST00000356232.8_1_3:132379015-132379228:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.2220458984375	2	425.221611	848.42867	0.62259	0.00026474	-0.28275	-0.00012023	0.33984	0.00014451	425.2213667883707	88.31	1.2374	88.461	88.071	89.309	0.15055					70	29	3	0	0	0	0.80706	1	8770	8770		19.36	1.0356	1	909990			3690	10362	2416	2419	4260	4260					-0.0016076560845021959
CLRRTSGG	8	Unmodified	_CLRRTSGG_					0	0	0		ENST00000491348.5_1_20:57416812-57475007:+|nuORF;ENST00000493744.5_1_20:57416812-57475007:+|nuORF	ENST00000491348.5_1_20:57416812-57475007:+|nuORF	ENST00000491348.5_1_20:57416812-57475007:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	425.2219543457031	2	425.221611	848.42867	-1.1718	-0.00049826	1.8771	0.00079818	0.70532	0.00029992	425.2222867734936	88.655	1.3102	88.655	88.249	89.559	0					69	30	3	0	0	0	0.87479	1	8571	8571		30.504	8.5438	1	896950			3691	12681	2417	2420	4261	4261					-0.0016076560845021959
CLRRTSGG	8	Unmodified	_CLRRTSGG_					0	0	0		ENST00000491348.5_1_20:57416812-57475007:+|nuORF;ENST00000493744.5_1_20:57416812-57475007:+|nuORF	ENST00000491348.5_1_20:57416812-57475007:+|nuORF	ENST00000491348.5_1_20:57416812-57475007:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.22210693359375	2	425.221611	848.42867	-0.18345	-7.8007E-05	0.72937	0.00031014	0.54592	0.00023214	425.22178484975404	88.514	1.3777	88.582	88.093	89.471	0.068161					86	32	4	0	0	0	0.87479	1	9001	9001		30.504	7.4612	1	955500			3692	12681	2417	2420	4262	4262					-0.0016076560845021959
CLRVLYFIVL	10	Unmodified	_CLRVLYFIVL_					0	0	0		ENST00000490339.1_1_1:236737366-236737993:-|nuORF	ENST00000490339.1_1_1:236737366-236737993:-|nuORF	ENST00000490339.1_1_1:236737366-236737993:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	620.4217529296875	2	619.87012	1237.72569	-0.12479	-7.7351E-05	-0.5389	-0.00033405	-0.66369	-0.0004114	620.3712118702064	100.57	0.70139	100.57	100.16	100.86	0					18	15	2	0	0	0	0.37624	1	10188	10188		37.159	20.442	1	58754			3693	12669	2418	2421	4263	4263					0.11633258495589871
CLRVLYFIVL	10	Unmodified	_CLRVLYFIVL_					0	0	0		ENST00000490339.1_1_1:236737366-236737993:-|nuORF	ENST00000490339.1_1_1:236737366-236737993:-|nuORF	ENST00000490339.1_1_1:236737366-236737993:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	619.87012	1237.72569	0.9165	0.00056811	-1.7649	-0.001094	-0.84837	-0.00052588	619.8686790873708	100.22	0.98767	100.37	100.03	101.02	0.15073	-0.11056	-0.00083894	NaN	37.159	27	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80227			3694	12669	2418	2421							0.11633258495589871
CLRVLYFIVL	10	Unmodified	_CLRVLYFIVL_					0	0	0		ENST00000490339.1_1_1:236737366-236737993:-|nuORF	ENST00000490339.1_1_1:236737366-236737993:-|nuORF	ENST00000490339.1_1_1:236737366-236737993:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	619.87012	1237.72569	-1.2248	-0.00075924	-0.40745	-0.00025257	-1.6323	-0.0010118	619.8700909572234	100.32	0.44273	100.5	100.37	100.81	0.17199	0.0164	0.00084392	NaN	37.159	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51434			3695	12669	2418	2421							0.11633258495589871
CLSDHWFHL	9	Unmodified	_CLSDHWFHL_					0	0	0		chr5:179766741-179771147|37|17.11|0.57|4.92|+|1|MAML1,MAML1|1	chr5:179766741-179771147|37|17.11|0.57|4.92|+|1|MAML1,MAML1|1	chr5:179766741-179771147|37|17.11|0.57|4.92|+|1|MAML1,MAML1|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.7529907226562	2	579.263476	1156.5124	0.41278	0.00023911	-4.4895	-0.0026006	-4.0767	-0.0023615	579.2613926195745	78.758	0.96129	78.704	78.102	79.063	-0.053558					40	25	3	0	0	0	0.20789	1	7807	7807		33.516	6.8227	1	131210			3696	448	2419	2422	4264	4264					-0.05959654231423883
CLSHRYGLYVC	11	Unmodified	_CLSHRYGLYVC_					0	0	0		ENSG00000111670|ENST00000299314|GNPTAB;nc|ENSG00000111670|Q3T906-2|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.87701416015625	3	438.542492	1312.60565	-0.53515	-0.00023468	0.39189	0.00017186	-0.14325	-6.2823E-05	438.87721321115936	33.998	0.56614	33.942	33.743	34.309	-0.056385					19	12	2	0	0	0	0.74022	1	2115	2115		24.232	0	1	29030			3697	2599	2420	2423	4265	4265					-0.03815097840492854
CLSHRYGLYVC	11	Unmodified	_CLSHRYGLYVC_					0	0	0		ENSG00000111670|ENST00000299314|GNPTAB;nc|ENSG00000111670|Q3T906-2|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	438.542492	1312.60565	0.6811	0.00029869	-1.3677	-0.00059979	-0.6866	-0.0003011	438.5415734995322	33.903	0.44463	33.906	33.706	34.15	0.0026016	-0.017821	-0.0013751	NaN	24.232	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27969			3698	2599	2420	2423							-0.03815097840492854
CLSLVFRK	8	Unmodified	_CLSLVFRK_					0	0	0		ENST00000473989.7_2_7:138992529-138992664:+|nuORF	ENST00000473989.7_2_7:138992529-138992664:+|nuORF	ENST00000473989.7_2_7:138992529-138992664:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.2373962402344	2	483.28368	964.552807	0.20051	9.6904E-05	2.03	0.00098107	2.2305	0.001078	483.2853341375006	39.868	0.23761	39.837	39.765	40.002	-0.03027					8	5	2	0	0	0	0.4196	1	2818	2818		29.15	16.943	1	21287			3699	12296	2421	2424	4266	4266					0.06911312159013505
CLSLYFGY	8	Unmodified	_CLSLYFGY_					0	0	0		ENSG00000119714|ENST00000650645|GPR68	ENSG00000119714|ENST00000650645|GPR68	ENSG00000119714|ENST00000650645|GPR68	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.2377014160156	2	483.225497	964.43644	-0.85866	-0.00041493	-4.4846	-0.0021671	-5.3432	-0.002582	483.2224749930433	39.966	0.20313	39.972	39.91	40.114	0.0065002					6	4	2	0	0	0	0.4196	1	2488	2488		37.028	4.2161	1	52177			3700	3092	2422	2425	4267	4267					-0.04720051131539549
CLTALDTL	8	Unmodified	_CLTALDTL_					0	0	0		nc|ENSG00000088387|Q9BZ29-3|DOCK9;nc|ENSG00000088387|Q9BZ29-5|DOCK9;nc|ENSG00000088387|Q9BZ29|DOCK9;ENSG00000088387|ENST00000682017|DOCK9;nc|ENSG00000088387|Q9BZ29-4|DOCK9	nc|ENSG00000088387|Q9BZ29-3|DOCK9	nc|ENSG00000088387|Q9BZ29-3|DOCK9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	425.2216796875	2	425.222954	848.431355	-1.1718	-0.00049826	-1.2805	-0.00054449	-2.4523	-0.0010428	425.2222867734936	88.655	1.3102	88.655	88.249	89.559	0					69	30	3	0	0	0	0.86791	1	8583	8583		28.254	4.0515	1	896950			3701	1589	2423	2426	4268	4268					0.00107645005834911
CLTERIHQME	10	Unmodified	_CLTERIHQME_					0	0	0		nc|ENSG00000100014|Q69YQ0-2|SPECC1L;ENSG00000100014|ENST00000314328|SPECC1L	nc|ENSG00000100014|Q69YQ0-2|SPECC1L	nc|ENSG00000100014|Q69YQ0-2|SPECC1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	630.2974853515625	2	630.29719	1258.57983	1.0969	0.00069134	-1.3181	-0.00083079	-0.22124	-0.00013945	630.2963342926464	23.71	0.66888	23.712	23.388	24.057	0.0018959					67	32	3	0	0	0	0.86587	1	771	771		29.17	1.2878	1	196440			3702	1784	2424	2427	4269	4269					-0.03911992082771576
CLTVRPRAEY	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))CLTVRPRAEY_					1	0	0			REV__ENST00000354752.5_1_9:99922575-99942308:-|nuORF	REV__ENST00000354752.5_1_9:99922575-99942308:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	625.8206787109375	2	625.321522	1248.62849	-0.3765	-0.00023544	-2.2202	-0.0013883	-2.5967	-0.0016238	625.3199036039578	64.522	1.0153	64.56	64.22	65.236	0.037849					73	33	3	0	0	0	0.54701	1	5702	5702		52.937	10.541	1	320220	+		3703	25362	2425	2428	4270	4270					0.014122445486236757
CLVKFRCEGG	10	Unmodified	_CLVKFRCEGG_					0	0	0			REV__ENST00000531608.1_1_11:130781387-130786189:-|nuORF	REV__ENST00000531608.1_1_11:130781387-130786189:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	556.7744140625	2	556.272986	1110.53142	-0.28	-0.00015576	3.4673	0.0019288	3.1873	0.001773	556.2745083738072	47.867	0.66684	47.841	47.644	48.311	-0.026737					35	18	3	0	0	0	0.49268	1	4011	4011		56.434	4.1346	1	346340	+		3704	28306	2426	2429	4271	4271					-0.019424409320208724
CLVLLLLVLIL	11	Unmodified	_CLVLLLLVLIL_					0	0	0		nc|ENSG00000113763|Q6ZN44-3|UNC5A;ENSG00000113763|ENST00000329542|UNC5A	nc|ENSG00000113763|Q6ZN44-3|UNC5A	nc|ENSG00000113763|Q6ZN44-3|UNC5A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.9506530761719	3	408.950306	1223.82909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.564	1	18.638	18.138	19.138	0.073465								0	0	0	0.56276	1	305	305		10.587	3.9272	1				3705	2744	2427	2430	4272	4272					0.22612745883407115
CLVNLRVPL	9	Unmodified	_CLVNLRVPL_					0	0	0			REV__ENSG00000157119|ENST00000287777|KLHL40	REV__ENSG00000157119|ENST00000287777|KLHL40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8084716796875	2	513.810062	1025.60557	0.34332	0.0001764	-2.5254	-0.0012976	-2.182	-0.0011212	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.76996	1	3727	3727		33.516	4.366	1	1306000	+		3706	20529	2428	2431	4273	4273					0.09379270221825209
CLVNLRVPL	9	Unmodified	_CLVNLRVPL_					0	0	0			REV__ENSG00000157119|ENST00000287777|KLHL40	REV__ENSG00000157119|ENST00000287777|KLHL40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8091430664062	2	513.810062	1025.60557	-0.15906	-8.1728E-05	-1.9421	-0.00099788	-2.1012	-0.0010796	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.72402	1	3612	3612		38.806	8.3025	1	1484700	+		3707	20529	2428	2431	4274	4274					0.09379270221825209
CLVVPRQS	8	Unmodified	_CLVVPRQS_					0	0	0			REV__ENST00000379731.4_1_9:33110684-33110912:-|nuORF	REV__ENST00000379731.4_1_9:33110684-33110912:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.24896240234375	2	451.249837	900.485122	-1.4974	-0.0006757	-0.66318	-0.00029926	-2.1606	-0.00097496	451.2494003851712	63.042	1.3844	63.429	62.881	64.266	0.38779					66	31	3	0	0	0	0.85277	1	6790	6790		25.45	0.94616	1	494160	+		3708	25928	2429	2432	4275	4275					0.03089862228216589
CLWVGDNEPRA	11	Unmodified	_CLWVGDNEPRA_					0	0	0			REV__ENST00000597691.5_1_19:12721808-12723065:+|nuORF	REV__ENST00000597691.5_1_19:12721808-12723065:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	630.7960815429688	2	630.295504	1258.57646	1.0969	0.00069134	1.3559	0.00085462	2.4528	0.001546	630.2963342926464	23.71	0.66888	23.712	23.388	24.057	0.0018959					67	32	3	0	0	0	0.6493	1	748	748		38.754	10.672	1	196440	+		3709	29270	2430	2433	4276	4276					-0.04248918865118867
CLWYHHPL	8	Unmodified	_CLWYHHPL_					0	0	0			REV__ENST00000064778.8_1_11:73113059-73113341:-|nuORF	REV__ENST00000064778.8_1_11:73113059-73113341:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.341552734375	2	534.75783	1067.50111	0.27301	0.00014599	0.39402	0.0002107	0.66702	0.0003567	534.7579247689077	65.845	0.48036	66.231	66.067	66.547	0.38581					17	11	2	0	0	0	0.4196	1	7158	7158		24.504	0	1	214530	+		3710	24070	2431	2434	4277	4277					-0.029944315348984674
CLYMWPSVP	9	Unmodified	_CLYMWPSVP_					0	0	0		ENSG00000171608|ENST00000377346|PIK3CD	ENSG00000171608|ENST00000377346|PIK3CD	ENSG00000171608|ENST00000377346|PIK3CD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.3740844726562	2	548.253731	1094.49291	1.3858	0.00075976	3.2412	0.001777	4.627	0.0025368	548.2556778840457	36.14	0.25017	36.581	36.451	36.702	0.44043					7	5	2	0	0	0	0.20789	1	2824	2824		12.959	0	1	71750			3711	6687	2432	2435	4278	4278					-0.050557465665178825
CMAAGCDH	8	Unmodified	_CMAAGCDH_					0	0	0		nc|ENSG00000173157|P59510|ADAMTS20;ENSG00000173157|ENST00000389420|ADAMTS20;chr12:43446712-43452274|30|16.83|0.0|13.78|-|0|ADAMTS20,ADAMTS20|1	nc|ENSG00000173157|P59510|ADAMTS20	nc|ENSG00000173157|P59510|ADAMTS20	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.1336364746094	2	404.132759	806.250964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.93	1	118.99	118.49	119.49	0.060577								0	0	0	0.30674	1	12502	12502		15.636	5.4514	1				3712	6834	2433	2436	4279	4279					-0.15991100194321461
CMAECLTPAIY	11	Carbamidomethyl (C),Oxidation (M)	_CM(Oxidation (M))AEC(Carbamidomethyl (C))LTPAIY_	C(0.01)MAEC(0.99)LTPAIY	CM(1)AECLTPAIY	C(-20)MAEC(20)LTPAIY	CM(41)AECLTPAIY	0	1	1		ENSG00000131730|ENST00000254035|CKMT2	ENSG00000131730|ENST00000254035|CKMT2	ENSG00000131730|ENST00000254035|CKMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	644.2738037109375	2	644.274535	1286.53452	0.13639	8.7873E-05	-3.4148	-0.0022001	-3.2785	-0.0021122	644.2723096308424	49.504	0.57583	49.501	49.225	49.8	-0.0030327					21	12	2	0	0	0	0.63176	1	4143	4143		40.778	11.608	2	120260			3713	3744	2434	2437	4280	4280	51	67			-0.09728978660177745
CMAECLTPAIY	11	Carbamidomethyl (C),Oxidation (M)	_CM(Oxidation (M))AEC(Carbamidomethyl (C))LTPAIY_					0	1	1		ENSG00000131730|ENST00000254035|CKMT2	ENSG00000131730|ENST00000254035|CKMT2	ENSG00000131730|ENST00000254035|CKMT2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	644.274535	1286.53452	-0.84685	-0.0005456	-2.6244	-0.0016908	-3.4712	-0.0022364	644.2726784936511	49.445	0.66412	49.421	49.191	49.855	-0.024033	-0.070961	0.001001	NaN	40.778	23	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129980			3714	3744	2434	2437			51	67			-0.09728978660177745
CMAECLTPAIY	11	Carbamidomethyl (C),Oxidation (M)	_CM(Oxidation (M))AEC(Carbamidomethyl (C))LTPAIY_					0	1	1		ENSG00000131730|ENST00000254035|CKMT2	ENSG00000131730|ENST00000254035|CKMT2	ENSG00000131730|ENST00000254035|CKMT2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	644.274535	1286.53452	0.95641	0.00061619	-4.023	-0.0025919	-3.0666	-0.0019757	644.2716076288885	49.55	0.57585	49.554	49.279	49.855	0.0035934	0.061696	-0.00080122	NaN	40.778	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107020			3715	3744	2434	2437			51	67			-0.09728978660177745
CMCGREDGG	9	Unmodified	_CMCGREDGG_					0	0	0		ENST00000540269.6_1_16:84733601-84733685:+|nuORF	ENST00000540269.6_1_16:84733601-84733685:+|nuORF	ENST00000540269.6_1_16:84733601-84733685:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.16156005859375	2	464.159505	926.304457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.277	1	73.317	72.817	73.817	0.040024								0	0	0	0.32469	1	7001	7001		21.96	0.25755	1				3716	13491	2435	2438	4281	4281					-0.16164347482458652
CMILFLMI	8	Unmodified	_CMILFLMI_					0	0	0		ENSG00000148841|ENST00000337478|ITPRIP	ENSG00000148841|ENST00000337478|ITPRIP	ENSG00000148841|ENST00000337478|ITPRIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.2617492675781	2	492.259971	982.505388	0.76318	0.00037569	3.9136	0.0019265	4.6767	0.0023022	492.2615692970932	28.4	0.53399	28.227	27.934	28.468	-0.17336					21	13	2	0	0	0	0.91333	1	1734	1734		43.626	0.76178	1	123000			3717	4986	2436	2439	4282	4282					0.013435735721373021
CMTCTKRY	8	Carbamidomethyl (C),Oxidation (M)	_CM(Oxidation (M))TC(Carbamidomethyl (C))TKRY_	CMTC(1)TKRY	CM(1)TCTKRY	C(-39)MTC(39)TKRY	CM(52)TCTKRY	0	1	1			REV__ENST00000462523.5_1_9:100437723-100444509:-|nuORF	REV__ENST00000462523.5_1_9:100437723-100444509:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.7240600585938	2	539.727555	1077.44056	0.51126	0.00027594	-4.2722	-0.0023058	-3.761	-0.0020299	539.7251084666202	24.772	0.68965	24.726	24.458	25.147	-0.04598					31	15	3	0	0	0	0.93529	1	1012	1012		52.299	8.6731	2	97663	+		3718	19351	2437	2440	4283	4283	245	285			-0.09506652971799667
CMTCTKRY	8	Carbamidomethyl (C),Oxidation (M)	_CM(Oxidation (M))TC(Carbamidomethyl (C))TKRY_	CMTC(1)TKRY	CM(1)TCTKRY	C(-36)MTC(36)TKRY	CM(71)TCTKRY	0	1	1			REV__ENST00000462523.5_1_9:100437723-100444509:-|nuORF	REV__ENST00000462523.5_1_9:100437723-100444509:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.7237548828125	2	539.727555	1077.44056	0.15283	8.2487E-05	-3.8836	-0.0020961	-3.7308	-0.0020136	539.7254197099079	24.362	0.49944	24.463	24.239	24.738	0.10045					50	24	3	0	0	0	0.60155	1	832	832		71.378	27.001	2	183770	+		3719	19351	2437	2440	4284	4284	245	285			-0.09506652971799667
CMVGLKFEL	9	Unmodified	_CMVGLKFEL_					0	0	0			REV__nc|ENSG00000196083|Q9NPH3-5|IL1RAP	REV__nc|ENSG00000196083|Q9NPH3-5|IL1RAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.269775390625	2	520.269381	1038.52421	0.84711	0.00044072	-1.6354	-0.00085084	-0.78828	-0.00041012	520.2683733158087	53.921	0.54391	54.334	54.036	54.58	0.4139					22	12	2	0	0	0	0.62081	1	5460	5460		45.952	0	1	1010700	+		3720	30121	2438	2441	4285	4285					0.006488264675454047
CMWEGLLY	8	Unmodified	_CMWEGLLY_					0	0	0		ENST00000602063.5_1_19:52497291-52497378:-|nuORF	ENST00000602063.5_1_19:52497291-52497378:-|nuORF	ENST00000602063.5_1_19:52497291-52497378:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	507.72509765625	2	507.724806	1013.43506	-0.057682	-2.9287E-05	2.5235	0.0012813	2.4659	0.001252	507.7259576910305	68.057	1.2232	68.079	67.673	68.896	0.021599					77	53	2	0	0	0	0.89457	1	6416	6416		37.028	1.8765	1	90908			3721	14396	2439	2442	4286	4286					-0.07112008491958477
CNAERCRSSP	10	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))NAERC(Carbamidomethyl (C))RSSP_	C(1)NAERC(1)RSSP		C(46)NAERC(46)RSSP		0	2	0		ENST00000559000.5_1_15:56945523-56946605:-|nuORF	ENST00000559000.5_1_15:56945523-56946605:-|nuORF	ENST00000559000.5_1_15:56945523-56946605:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.765869140625	2	618.764046	1235.51354	-0.056916	-3.5218E-05	2.6348	0.0016303	2.5779	0.0015951	618.7656465057197	31.606	0.61924	31.624	31.29	31.909	0.018362					28	13	3	0	0	0	0.67571	1	1731	1731		45.972	9.5255	1	99905			3722	13799	2440	2443	4287	4287	184;185				-0.09479807924822126
CNAKKCIGL	9	Unmodified	_CNAKKCIGL_					0	0	0			REV__ENST00000163416.6_1_14:93305818-93305962:+|nuORF	REV__ENST00000163416.6_1_14:93305818-93305962:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	475.25189208984375	2	475.251523	948.488493	0.96474	0.00045849	-0.28064	-0.00013337	0.6841	0.00032512	475.25122648477344	19.889	0.3994	19.96	19.767	20.166	0.071127					36	15	3	0	0	0	0.72402	1	442	442		38.806	3.6054	1	97265	+		3723	24077	2441	2444	4288	4288					0.012187890105678889
CNCNEHSISCH	11	Unmodified	_CNCNEHSISCH_					0	0	0		ENSG00000091136|ENST00000222399|LAMB1	ENSG00000091136|ENST00000222399|LAMB1	ENSG00000091136|ENST00000222399|LAMB1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.7244873046875	2	623.723532	1245.43251	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.54	1	112.57	112.07	113.07	0.030602								0	0	0	0.56276	1	13612	13612		25.574	1.0549	1				3724	1668	2442	2445	4289	4289					-0.18038831959211166
CNDEGLECV	9	Unmodified	_CNDEGLECV_					0	0	0		nc|ENSG00000112715|P15692-10|VEGFA;ENST00000476772.5_1_6:43738443-43746274:+|nuORF;ENSG00000112715|ENST00000672860|VEGFA;nc|ENSG00000112715|P15692-16|VEGFA;nc|ENSG00000112715|P15692-11|VEGFA;nc|ENSG00000112715|P15692-15|VEGFA;nc|ENSG00000112715|P15692-17|VEGFA;nc|ENSG00000112715|P15692-12|VEGFA;nc|ENSG00000112715|P15692-18|VEGFA;nc|ENSG00000112715|P15692-1|VEGFA;ENST00000518538.5_1_6:43738983-43746656:+|nuORF;nc|ENSG00000112715|P15692-2|VEGFA;nc|ENSG00000112715|P15692-3|VEGFA;nc|ENSG00000112715|P15692-8|VEGFA;nc|ENSG00000112715|P15692-4|VEGFA;nc|ENSG00000112715|P15692-5|VEGFA;nc|ENSG00000112715|P15692-6|VEGFA;nc|ENSG00000112715|P15692-9|VEGFA;nc|ENSG00000112715|P15692-14|VEGFA	nc|ENSG00000112715|P15692-10|VEGFA	nc|ENSG00000112715|P15692-10|VEGFA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.1820373535156	2	491.186242	980.357932	-1.1534	-0.00056653	-0.20865	-0.00010248	-1.362	-0.00066901	491.18602985671697	74.119	0.82298	74.205	73.877	74.7	0.085907					65	36	2	0	0	0	0.76764	1	6787	6787		34.173	1.3601	1	232930			3725	2678	2443	2446	4290	4290					-0.13303271498932645
CNKAFVTPSV	10	Unmodified	_CNKAFVTPSV_					0	0	0		nc|ENSG00000138738|Q9NQX1-4|PRDM5;nc|ENSG00000138738|Q9NQX1-2|PRDM5;ENSG00000138738|ENST00000264808|PRDM5;ENST00000505484.5_1_4:121652936-121737791:-|nuORF	nc|ENSG00000138738|Q9NQX1-4|PRDM5	nc|ENSG00000138738|Q9NQX1-4|PRDM5	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.2715454101562	2	533.273509	1064.53247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.882	1	56.87	56.37	57.37	-0.012203								0	0	0	0.092001	1	5115	5115		77.318	15.21	1				3726	4323	2444	2447	4291	4291					0.00278096708530029
CNKRKRVW	8	Unmodified	_CNKRKRVW_					0	0	0			REV__ENSG00000135999|ENST00000258484|EPC2	REV__ENSG00000135999|ENST00000258484|EPC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3059692382812	2	545.308552	1088.60255	-0.48126	-0.00026244	-3.9505	-0.0021542	-4.4318	-0.0024167	545.3063656741804	60.206	0.53917	60.207	59.973	60.512	0.00051498					29	16	2	0	0	0	0.85277	1	5195	5195		25.45	1.2474	1	128560	+		3727	19278	2445	2448	4292	4292					0.0617943988766001
CNNFGNCQCFP	11	Unmodified	_CNNFGNCQCFP_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.7230834960938	2	623.725543	1245.43653	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.26	1	112.32	111.82	112.82	0.066025								0	0	0	0.56276	1	12097	12097		9.7057	2.5123	1				3728	6419	2446	2449	4293	4293					-0.17636742465515454
CNNGTAEV	8	Unmodified	_CNNGTAEV_					0	0	0			REV__nc|ENSG00000215301|O00571-2|DDX3X	REV__nc|ENSG00000215301|O00571-2|DDX3X	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.17034912109375	2	404.16871	806.322867	2.4772	0.0010012	0.73353	0.00029647	3.2107	0.0012977	404.16914392538314	78.456	2.0058	78.508	78.086	80.092	0.051682					179	62	5	0	0	0	0.86677	1	7841	7841		27.882	1.0861	1	6709200	+		3729	23681	2447	2450	4294	4294					-0.08804146244585809
CNQIEFLN	8	Unmodified	_CNQIEFLN_					0	0	0		ENSG00000119917|ENST00000371818|IFIT3	ENSG00000119917|ENST00000371818|IFIT3	ENSG00000119917|ENST00000371818|IFIT3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	490.7061767578125	2	490.728935	979.443317	-1.3899	-0.00068204	-2.088	-0.0010246	-3.4778	-0.0017067	490.7273342666612	28.356	0.18254	28.333	28.211	28.393	-0.023556					5	3	2	0	0	0	0.4196	1	1355	1355		31.955	8.9124	1	7875.4			3730	3103	2448	2451	4295	4295					-0.047227382509845484
CNQSLMKLV	9	Unmodified	_CNQSLMKLV_					0	0	0		ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.2506713867188	2	518.269912	1034.52527	1.0557	0.00054712	-1.7651	-0.00091479	-0.70943	-0.00036767	518.2688170346615	33.907	0.53886	34.107	33.85	34.389	0.19934					21	12	3	0	0	0	0.20789	1	2459	2459		25.574	1.0549	1	290190			3731	2046	2449	2452	4296	4296					0.009390408364652103
CNSDCNCDESQ	11	Unmodified	_CNSDCNCDESQ_					0	0	0		ENSG00000134538|ENST00000256958|SLCO1B1	ENSG00000134538|ENST00000256958|SLCO1B1	ENSG00000134538|ENST00000256958|SLCO1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	609.1817626953125	2	609.17882	1216.34309	0.30138	0.0001836	3.7033	0.002256	4.0047	0.0024396	609.1811592316869	33.358	0.56106	33.468	33.21	33.771	0.10991					32	22	2	0	0	0	0.79858	1	1638	1638		11.636	1.3707	1	110940			3732	3941	2450	2453	4297	4297					-0.25643131429274035
CNSGPALNDV	10	Unmodified	_CNSGPALNDV_					0	0	0		ENSG00000157881|ENST00000378466|PANK4;ENST00000502512.1_3_1:2441299-2442819:-|nuORF	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	495.21929931640625	2	495.221474	988.428395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.756	1	70.833	70.333	71.333	0.076225								0	0	0	0.45132	1	6404	6404		31.634	3.38	1				3733	5452	2451	2454	4298	4298					-0.06628230118985812
CPAAVESH	8	Unmodified	_CPAAVESH_					0	0	0			REV__ENSG00000163964|ENST00000392391|PIGX	REV__ENSG00000163964|ENST00000392391|PIGX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.18377685546875	2	407.18162	812.348688	0.90789	0.00036968	3.3539	0.0013657	4.2618	0.0017353	407.183259835082	97.08	1.3079	97.471	97.073	98.381	0.39065					91	31	5	0	0	0	0.9159	1	11702	11702		44.531	0	1	3974100	+		3734	21005	2452	2455	4299	4299					-0.06499252002311096
CPACLLAGALR	11	Unmodified	_CPACLLAGALR_					0	0	0		ENST00000241041.7_1_11:45931313-45931427:-|nuORF	ENST00000241041.7_1_11:45931313-45931427:-|nuORF	ENST00000241041.7_1_11:45931313-45931427:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.4954223632812	2	544.291179	1086.56781	-0.95345	-0.00051896	-0.16762	-9.1231E-05	-1.1211	-0.00061019	544.2910100772176	38.583	0.45738	39.106	38.87	39.328	0.52235					24	10	3	0	0	0	0.14847	1	3208	3208		47.657	0	1	229630			3735	9248	2453	2456	4300	4300					0.02798435964677992
CPACSLDV	8	Unmodified	_CPACSLDV_					0	0	0		ENSG00000129646|ENST00000680821|QRICH2;nc|ENSG00000129646|Q9H0J4-3|QRICH2;ENST00000524722.1_2_17:74270319-74300575:-|nuORF;nc|ENSG00000129646|Q9H0J4|QRICH2;nc|ENSG00000129646|Q9H0J4-2|QRICH2	ENSG00000129646|ENST00000680821|QRICH2	ENSG00000129646|ENST00000680821|QRICH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.17022705078125	2	404.172407	806.330261	-1.8319	-0.00074042	-3.7939	-0.0015334	-5.6259	-0.0022738	404.17089024317255	78.364	3.0861	78.491	77.697	80.783	0.12695					160	99	2	0	0	0	0.80706	1	7522	7522		19.36	0	1	7642900			3736	3598	2454	2457	4301	4301					-0.08065129968531437
CPAFWDIGE	9	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PAFWDIGE_	C(1)PAFWDIGE		C(50)PAFWDIGE		0	1	0		ENSG00000187720|ENST00000261862|THSD4;ENST00000567838.1_1_15:71952820-72059070:+|nuORF;nc|ENSG00000187720|Q6ZMP0-4|THSD4	ENSG00000187720|ENST00000261862|THSD4	ENSG00000187720|ENST00000261862|THSD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.733154296875	2	547.734217	1093.45388	0.42179	0.00023103	3.4014	0.0018631	3.8232	0.0020941	547.7356987472967	27.714	0.44574	27.676	27.434	27.88	-0.038523					17	10	2	0	0	0	0.5393	1	1342	1342		50.025	12.213	1	31426			3737	7875	2455	2458	4302	4302	93				-0.0891075559654837
CPAFWDIGE	9	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PAFWDIGE_					0	1	0		ENSG00000187720|ENST00000261862|THSD4;ENST00000567838.1_1_15:71952820-72059070:+|nuORF;nc|ENSG00000187720|Q6ZMP0-4|THSD4	ENSG00000187720|ENST00000261862|THSD4	ENSG00000187720|ENST00000261862|THSD4	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	547.734217	1093.45388	0.85518	0.00046841	2.5041	0.0013716	3.3593	0.00184	547.735472557621	27.757	0.45891	27.733	27.56	28.019	-0.023558	0.037554	-0.0002337	NaN	50.025	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32474			3738	7875	2455	2458			93				-0.0891075559654837
CPCLPSHD	8	Unmodified	_CPCLPSHD_					0	0	0		ENST00000296873.11_1_5:132093085-132093202:-|nuORF	ENST00000296873.11_1_5:132093085-132093202:-|nuORF	ENST00000296873.11_1_5:132093085-132093202:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.173583984375	2	436.175481	870.336409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.391	1	62.512	62.012	63.012	0.1209								0	0	0	0.29353	1	5437	5437		28.254	2.6802	1				3739	9751	2456	2459	4303	4303					-0.10394611737012838
CPDMHRPF	8	Unmodified	_CPDMHRPF_					0	0	0		ENSG00000151012|ENST00000280612|SLC7A11	ENSG00000151012|ENST00000280612|SLC7A11	ENSG00000151012|ENST00000280612|SLC7A11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.72601318359375	2	501.717847	1001.42114	-1.108	-0.00055589	-1.1531	-0.00057855	-2.2611	-0.0011344	501.7171752242582	56.868	0.59113	57.265	56.985	57.576	0.39672					24	13	2	0	0	0	0.86288	1	5891	5891		26.796	1.3459	1	327230			3740	5089	2457	2460	4304	4304					-0.07951241200385084
CPDTMWLGP	9	Unmodified	_CPDTMWLGP_					0	0	0		nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;nc|ENSG00000157193|Q14114-3|LRP8;ENSG00000157193|ENST00000306052|LRP8;ENST00000460214.5_1_1:53723708-53728160:-|nuORF	nc|ENSG00000157193|Q14114-2|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.22271728515625	2	510.219888	1018.42522	1.4058	0.00071727	4.4528	0.0022719	5.8586	0.0029892	510.22200691810997	92.893	1.7711	93.34	92.349	94.12	0.44661					97	41	3	0	0	0	0.77546	1	11090	11090		31.955	8.4322	1	1371800			3741	5415	2458	2461	4305	4305					-0.08325196497332854
CPERIITLT	9	Unmodified	_CPERIITLT_					0	0	0		ENSG00000169564|ENST00000303577|PCBP1	ENSG00000169564|ENST00000303577|PCBP1	ENSG00000169564|ENST00000303577|PCBP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7882690429688	2	523.289159	1044.56377	-0.16297	-8.5281E-05	2.5165	0.0013168	2.3535	0.0012316	523.2905601282732	45.365	0.77156	45.828	45.554	46.326	0.46313					25	18	2	0	0	0	0.20789	1	4241	4241		54.776	19.624	1	836990			3742	6506	2459	2462	4306	4306					0.043266697426361134
CPERIITLT	9	Unmodified	_CPERIITLT_					0	0	0		ENSG00000169564|ENST00000303577|PCBP1	ENSG00000169564|ENST00000303577|PCBP1	ENSG00000169564|ENST00000303577|PCBP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	523.289159	1044.56377	-0.04351	-2.2768E-05	5.6761	0.0029702	5.6326	0.0029475	523.2928994141031	45.888	0.2132	45.809	45.719	45.933	-0.079002	-0.0096558	0.0018804	NaN	54.776	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35172			3743	6506	2459	2462							0.043266697426361134
CPGAGPWLPG	10	Unmodified	_CPGAGPWLPG_					0	0	0		ENST00000303277.6_1_4:1718369-1718675:-|nuORF	ENST00000303277.6_1_4:1718369-1718675:-|nuORF	ENST00000303277.6_1_4:1718369-1718675:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.72833251953125	2	477.728738	953.442923	-1.6875	-0.00080617	1.2904	0.00061644	-0.39714	-0.00018972	477.72916912562187	95.352	0.78807	95.555	95.232	96.02	0.20242					42	18	3	0	0	0	0.85976	1	9737	9737		35.201	3.2459	1	640610			3744	9829	2460	2463	4307	4307					-0.03566113180181674
CPGCRCSLAVP	11	Unmodified	_CPGCRCSLAVP_					0	0	0			REV__ENSG00000104826|ENST00000649238|LHB	REV__ENSG00000104826|ENST00000649238|LHB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.24755859375	2	553.251197	1104.48784	-0.68731	-0.00038025	-3.2597	-0.0018034	-3.947	-0.0021837	553.2492219230396	36.217	0.94708	36.198	35.784	36.731	-0.018673					48	20	4	0	0	0	0.32318	1	2334	2334		69.628	13.194	1	674130	+		3745	17477	2461	2464	4308	4308					-0.06022373700807293
CPHLPAFMLP	10	Unmodified	_CPHLPAFMLP_					0	0	0			REV__ENST00000432854.5_1_7:44103291-44103480:+|nuORF	REV__ENST00000432854.5_1_7:44103291-44103480:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.2785034179688	2	563.282823	1124.55109	-1.1311	-0.00063716	-3.3381	-0.0018803	-4.4692	-0.0025174	563.2807362382775	37.631	0.51399	37.607	37.35	37.864	-0.023979					22	11	3	0	0	0	0.51323	1	2491	2491		54.765	16.011	1	100060	+		3746	26640	2462	2465	4309	4309					-0.00620064921258745
CPICCSEYIK	10	Unmodified	_CPICCSEYIK_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.7537231445312	2	579.753238	1157.49192	-0.27607	-0.00016005	0.53558	0.00031051	0.25951	0.00015045	579.7534821789302	78.131	0.87527	78.181	77.655	78.53	0.04969					85	32	4	0	0	0	0.86589	1	7692	7692		29.15	0	1	547020			3747	8381	2463	2466	4310	4310					-0.08052328997769109
CPIDQLGPDQL	11	Unmodified	_CPIDQLGPDQL_					0	0	0			REV__ENSG00000168453|ENST00000381418|HR	REV__ENSG00000168453|ENST00000381418|HR	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.1966857910156	3	400.197268	1197.56997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.876	1	86.024	85.524	86.524	0.14874								0	0	0	0.56276	1	8421	8421		43.651	14.1	1		+		3748	21489	2464	2467	4311	4311					-0.020908568164941244
CPIDQLGPDQL	11	Unmodified	_CPIDQLGPDQL_					0	0	0			REV__ENSG00000168453|ENST00000381418|HR	REV__ENSG00000168453|ENST00000381418|HR	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.1976013183594	3	400.197268	1197.56997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.419	1	81.919	81.419	82.419	0.49967								0	0	0	0.56276	1	9415	9415		41.08	10.511	1		+		3749	21489	2464	2467	4312	4312					-0.020908568164941244
CPIDQLGPDQL	11	Unmodified	_CPIDQLGPDQL_					0	0	0			REV__ENSG00000168453|ENST00000381418|HR	REV__ENSG00000168453|ENST00000381418|HR	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.19635009765625	3	400.197268	1197.56997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.575	1	86.022	85.522	86.522	0.44736								0	0	0	0.56276	1	10031	10031		50.034	5.3941	1		+		3750	21489	2464	2467	4313	4313					-0.020908568164941244
CPIKPLRSL	9	Unmodified	_CPIKPLRSL_					0	0	0			REV__nc|ENSG00000107242|O14986-2|PIP5K1B	REV__nc|ENSG00000107242|O14986-2|PIP5K1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8099365234375	2	513.810062	1025.60557	-0.43911	-0.00022562	-1.7271	-0.0008874	-2.1662	-0.001113	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.69624	1	4404	4404		40.778	3.6191	1	1606900	+		3751	29766	2465	2468	4314	4314					0.09379270221802471
CPKAPRTDKL	10	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PKAPRTDKL_	C(1)PKAPRTDKL		C(48)PKAPRTDKL		0	1	0		L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|3|1|sense	L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|3|1|sense	L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|3|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.32177734375	2	593.324065	1184.63358	0.35221	0.00020898	-4.4607	-0.0026467	-4.1085	-0.0024377	593.3214955496583	41.16	1.5019	41.115	40.771	42.273	-0.045467					105	44	3	0	0	0	0.63899	1	2695	2695		47.96	6.5329	1	2608700			3752	14618	2466	2469	4315	4315	193				0.048645484112284976
CPKCARLSL	9	Carbamidomethyl (C)	_CPKC(Carbamidomethyl (C))ARLSL_	C(0.007)PKC(0.993)ARLSL		C(-22)PKC(22)ARLSL		0	1	0		nc|ENSG00000140995|Q6ZN54-4|DEF8;nc|ENSG00000140995|Q6ZN54-6|DEF8;nc|ENSG00000140995|Q6ZN54-3|DEF8;ENSG00000140995|ENST00000563594|DEF8;nc|ENSG00000140995|Q6ZN54|DEF8	nc|ENSG00000140995|Q6ZN54-4|DEF8	nc|ENSG00000140995|Q6ZN54-4|DEF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2770385742188	2	524.275529	1046.53651	2.3129	0.0012126	4.061	0.0021291	6.3739	0.0033417	524.277483096121	104.22	0.66258	104.41	104.2	104.86	0.18888					28	15	3	0	0	0	0.55097	1	12684	12684		49.442	7.0454	2	245990			3753	4473	2467	2470	4316	4316	59				0.015098629306066869
CPLGRAVV	8	Unmodified	_CPLGRAVV_					0	0	0			REV__ENST00000437626.5_1_21:46645550-46645877:+|nuORF	REV__ENST00000437626.5_1_21:46645550-46645877:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.785400390625	2	407.733823	813.453093	0.14204	5.7913E-05	-1.6175	-0.00065951	-1.4755	-0.00060159	407.73170570505494	35.134	0.20437	35.24	35.11	35.314	0.10603					7	5	2	0	0	0	0.4196	1	1821	1821		29.842	15.177	1	37060	+		3754	26711	2468	2471	4317	4317					0.038904945450553896
CPLPAFHQL	9	Unmodified	_CPLPAFHQL_					0	0	0		ENST00000607044.1_1_3:158519393-158519720:-|nuORF	ENST00000607044.1_1_3:158519393-158519720:-|nuORF	ENST00000607044.1_1_3:158519393-158519720:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8099365234375	2	513.265487	1024.51642	-0.4307	-0.00022106	2.2158	0.0011373	1.7851	0.00091621	513.2663481736075	50.722	0.59933	50.699	50.427	51.027	-0.02343					29	20	2	0	0	0	0.20789	1	4404	4404		50.025	5.6474	1	113220			3755	14456	2469	2472	4318	4318					0.00514435262311963
CPPDEAIH	8	Unmodified	_CPPDEAIH_					0	0	0			REV__ENSG00000139354|ENST00000547754|GAS2L3	REV__ENSG00000139354|ENST00000547754|GAS2L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.19549560546875	2	441.194728	880.374903	1.3728	0.00060569	3.186	0.0014057	4.5589	0.0020114	441.19600127736516	103.65	0.51379	103.84	103.6	104.11	0.18888					28	12	3	0	0	0	0.92973	1	12621	12621		50.025	2.1089	1	649240	+		3756	19536	2470	2473	4319	4319					-0.07006982830841935
CPPDEAIH	8	Unmodified	_CPPDEAIH_					0	0	0			REV__ENSG00000139354|ENST00000547754|GAS2L3	REV__ENSG00000139354|ENST00000547754|GAS2L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.1927795410156	2	441.194728	880.374903	1.4	0.00061767	2.1395	0.00094395	3.5395	0.0015616	441.1959759041456	104.26	0.74777	104.45	104.11	104.86	0.18888					31	17	3	0	0	0	0.884	1	12668	12668		33.516	6.7195	1	328410	+		3757	19536	2470	2473	4320	4320					-0.07006982830841935
CPPDEAIH	8	Unmodified	_CPPDEAIH_					0	0	0			REV__ENSG00000139354|ENST00000547754|GAS2L3	REV__ENSG00000139354|ENST00000547754|GAS2L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.1942138671875	2	441.194728	880.374903	1.4887	0.00065681	3.2225	0.0014218	4.7112	0.0020786	441.1959717407178	97.924	0.99309	98.3	97.873	98.866	0.37679					54	23	4	0	0	0	0.90024	1	11848	11848		39.021	3.8208	1	480390	+		3758	19536	2470	2473	4321	4321					-0.07006982830841935
CPPDEAIH	8	Unmodified	_CPPDEAIH_					0	0	0			REV__ENSG00000139354|ENST00000547754|GAS2L3	REV__ENSG00000139354|ENST00000547754|GAS2L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.1958923339844	2	441.194728	880.374903	3.1436	0.0013869	1.2199	0.0005382	4.3635	0.0019251	441.1952815384194	102.68	0.39136	102.98	102.64	103.03	0.29864					14	9	3	0	0	0	0.92176	1	12512	12512		46.766	4.292	1	669200	+		3759	19536	2470	2473	4322	4322					-0.07006982830841935
CPPDEAIH	8	Unmodified	_CPPDEAIH_					0	0	0			REV__ENSG00000139354|ENST00000547754|GAS2L3	REV__ENSG00000139354|ENST00000547754|GAS2L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.1933898925781	2	441.194728	880.374903	3.4968	0.0015428	1.0106	0.00044586	4.5074	0.0019886	441.19511689467936	103.62	0.69962	103.88	103.54	104.24	0.26524					27	16	2	0	0	0	0.92973	1	12670	12670		50.025	5.4935	1	651080	+		3760	19536	2470	2473	4323	4323					-0.07006982830841935
CPPDEAIH	8	Unmodified	_CPPDEAIH_					0	0	0			REV__ENSG00000139354|ENST00000547754|GAS2L3	REV__ENSG00000139354|ENST00000547754|GAS2L3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	441.194728	880.374903	-1.408	-0.00062122	-1.3868	-0.00061184	-2.7948	-0.0012331	441.19298203353105	102.63	0.41422	102.82	102.52	102.94	0.19484	-0.066101	-0.0027456	NaN	46.766	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64784	+		3761	19536	2470	2473							-0.07006982830841935
CPPDEAIH	8	Unmodified	_CPPDEAIH_					0	0	0			REV__ENSG00000139354|ENST00000547754|GAS2L3	REV__ENSG00000139354|ENST00000547754|GAS2L3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	441.194728	880.374903	1.3246	0.00058439	3.3522	0.001479	4.6768	0.0020634	441.196101236538	102.63	0.31786	102.86	102.61	102.93	0.22556	-0.027837	0.0014361	NaN	46.766	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	315080	+		3762	19536	2470	2473							-0.07006982830841935
CPPDEAIH	8	Unmodified	_CPPDEAIH_					0	0	0			REV__ENSG00000139354|ENST00000547754|GAS2L3	REV__ENSG00000139354|ENST00000547754|GAS2L3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	441.194728	880.374903	3.1436	0.0013869	1.2199	0.0005382	4.3635	0.0019251	441.1952815384194	102.68	0.39136	102.98	102.64	103.03	0.29864	0.093939	-0.00044548	NaN	46.766	14	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	669200	+		3763	19536	2470	2473							-0.07006982830841935
CPPLLVGLPG	10	Unmodified	_CPPLLVGLPG_					0	0	0			REV__ENST00000484749.5_1_1:228360905-228363211:+|nuORF	REV__ENST00000484749.5_1_1:228360905-228363211:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.2787780761719	2	483.278063	964.541574	-0.091589	-4.4263E-05	1.604	0.00077519	1.5124	0.00073093	483.2788975333247	95.387	2.1171	95.453	94.837	96.954	0.06591					117	49	3	0	0	0	0.86786	1	10067	10067		26.796	0.10319	1	1245700	+		3764	27516	2471	2474	4324	4324					0.05788490064890084
CPPLPLPLPL	10	Unmodified	_CPPLPLPLPL_					0	0	0		ENST00000562350.1_1_16:58541595-58541769:+|nuORF	ENST00000562350.1_1_16:58541595-58541769:+|nuORF	ENST00000562350.1_1_16:58541595-58541769:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.6317138671875	2	530.317189	1058.61982	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.918	1	67.303	66.803	67.803	0.38515								0	0	0	0.45132	1	7317	7317		35.201	1.6851	1				3765	13847	2472	2475	4325	4325					0.09285922650110479
CPPLQNLASTI	11	Unmodified	_CPPLQNLASTI_					0	0	0			REV__ENSG00000133056|ENST00000684373|PIK3C2B	REV__ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.302490234375	2	578.805174	1155.59579	-1.7201	-0.0009956	-1.0567	-0.00061164	-2.7768	-0.0016072	578.8042777679676	46.615	0.64941	47.087	46.695	47.344	0.47139					25	15	2	0	0	0	0.60058	1	4396	4396		44.377	0.26039	1	1251000	+		3766	19053	2473	2476	4326	4326					0.024220374257765798
CPPPAVSRR	9	Unmodified	_CPPPAVSRR_					0	0	0			REV__ENST00000472852.1_1_9:138392577-138393711:+|nuORF	REV__ENST00000472852.1_1_9:138392577-138393711:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.3041687011719	2	491.766186	981.517819	-0.78559	-0.00038633	-4.4117	-0.0021695	-5.1973	-0.0025559	491.76404017316463	63.827	0.57457	63.857	63.658	64.233	0.030243					42	23	2	0	0	0	0.77244	1	5631	5631		32.812	4.9302	1	123660	+		3767	27270	2474	2477	4327	4327					0.026320693510683668
CPPQCACQIR	10	Unmodified	_CPPQCACQIR_					0	0	0		ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.8238525390625	2	559.748821	1117.48309	0.1256	7.0304E-05	-2.9191	-0.001634	-2.7935	-0.0015637	559.7468782688355	81.89	0.38906	82.39	82.188	82.577	0.49966					15	9	2	0	0	0	0.37624	1	9480	9480		58.782	27.148	1	123410			3768	6581	2475	2478	4328	4328					-0.07095257843593572
CPPSPCPEP	9	Carbamidomethyl (C)	_CPPSPC(Carbamidomethyl (C))PEP_	CPPSPC(1)PEP		C(-50)PPSPC(50)PEP		0	1	0		ENSG00000135253|ENST00000610776|KCP;nc|ENSG00000135253|Q6ZWJ8-4|KCP;nc|ENSG00000135253|Q6ZWJ8|KCP	ENSG00000135253|ENST00000610776|KCP	ENSG00000135253|ENST00000610776|KCP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2012939453125	2	492.201696	982.388838	-0.69223	-0.00034072	0.55708	0.00027419	-0.13515	-6.6523E-05	492.20187562901464	58.205	0.84068	58.292	58.02	58.86	0.087002					63	36	2	0	0	0	0.47272	1	4946	4946		53.351	14.099	2	345760			3769	3997	2476	2479	4329	4329	54				-0.10306073394053783
CPPTALHGAL	10	Unmodified	_CPPTALHGAL_					0	0	0		ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60214444-60217453:-|nuORF	ENSG00000099821|ENST00000588649|POLRMT	ENSG00000099821|ENST00000588649|POLRMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.2578125	2	490.25512	978.495686	4.4093	0.0021617	1.3805	0.0006768	5.7898	0.0028385	490.2556618815464	107.13	2.0845	107.27	105.83	107.92	0.14929					167	83	3	0	0	0	0.85934	1	13129	13129		35.618	0	1	1494000			3770	1769	2477	2480	4330	4330					0.005578448826440763
CPQARVRERRL	11	Unmodified	_CPQARVRERRL_					0	0	0			REV__ENSG00000171119|ENST00000303212|NRTN	REV__ENSG00000171119|ENST00000303212|NRTN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.9483642578125	3	461.92985	1382.76772	0.7652	0.00035347	-3.7561	-0.0017351	-2.9909	-0.0013816	461.92737933675954	107.6	0.41357	107.69	107.5	107.92	0.091255					13	9	2	0	0	0	0.1767	1	11560	11560		18.531	2.0012	1	196520	+		3771	21714	2478	2481	4331	4331					0.0916462695665814
CPRKLGEILIL	11	Unmodified	_CPRKLGEILIL_					0	0	0			REV__ENST00000514690.5_1_4:11401702-11430093:-|nuORF	REV__ENST00000514690.5_1_4:11401702-11430093:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	627.3764038085938	2	627.883758	1253.75296	2.8915	0.0018155	-2.4098	-0.0015131	0.48168	0.00030244	627.8819908475259	112.19	0.57758	112.17	112.07	112.65	-0.025414					31	12	3	0	0	0	0.1729	1	12388	12388		34.173	11.593	1	5035800	+		3772	28019	2479	2482	4332	4332					0.13623742035997566
CPRLCLVIGSR	11	Unmodified	_CPRLCLVIGSR_					0	0	0		nc|ENSG00000132394|P57772-2|EEFSEC;ENSG00000132394|ENST00000254730|EEFSEC	nc|ENSG00000132394|P57772-2|EEFSEC	nc|ENSG00000132394|P57772-2|EEFSEC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.8364868164062	2	608.836285	1215.65802	-0.1449	-8.8218E-05	1.5979	0.00097285	1.453	0.00088463	608.8371154069557	110.53	1.2053	110.53	110.28	111.48	0					111	36	5	0	0	0	0.7144	1	11549	11549		29.17	2.1227	1	1502000			3773	3792	2480	2483	4333	4333					0.05881485293116384
CPRLDDPAW	9	Unmodified	_CPRLDDPAW_					0	0	0		ENSG00000140521|ENST00000268124|POLG	ENSG00000140521|ENST00000268124|POLG	ENSG00000140521|ENST00000268124|POLG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7450561523438	2	536.747659	1071.48076	-0.65993	-0.00035422	-2.9397	-0.0015779	-3.5996	-0.0019321	536.7459714608132	69.256	1.875	69.803	69.324	71.199	0.54694					117	48	5	0	0	0	0.7932	1	7682	7682		25.45	1.2474	1	5310600			3774	4440	2481	2484	4334	4334					-0.05211646985367224
CPRWPPAPGAP	11	Unmodified	_CPRWPPAPGAP_					0	0	0			REV__ENST00000420069.3_3_11:67195969-67200219:+|nuORF	REV__ENST00000420069.3_3_11:67195969-67200219:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.26220703125	2	574.787118	1147.55968	-1.5099	-0.00086789	-0.4074	-0.00023417	-1.9173	-0.0011021	574.7867845756953	30.276	0.57474	30.305	30.096	30.671	0.028618					16	12	2	0	0	0	0.17289	1	1953	1953		15.642	0	1	69678	+		3775	26484	2482	2485	4335	4335					-0.008193749604288314
CPSAEPAH	8	Unmodified	_CPSAEPAH_					0	0	0		ENSG00000166860|ENST00000300101|ZBTB39	ENSG00000166860|ENST00000300101|ZBTB39	ENSG00000166860|ENST00000300101|ZBTB39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.17620849609375	2	406.173795	810.333038	0.71022	0.00028847	3.9683	0.0016118	4.6785	0.0019003	406.1754560618925	96.49	1.6931	96.894	96.458	98.151	0.40451					82	40	3	0	0	0	0.89457	3	11606	11606;11616;11628		37.028	5.0736	1	1730200			3776	6238	2483	2486	4336;4337;4338	4336					-0.07971538519370824
CPSIHPMCL	9	Oxidation (M)	_CPSIHPM(Oxidation (M))CL_		CPSIHPM(1)CL		CPSIHPM(60)CL	0	0	1		ENST00000589882.1_1_6:41248622-41249060:-|nuORF	ENST00000589882.1_1_6:41248622-41249060:-|nuORF	ENST00000589882.1_1_6:41248622-41249060:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.7191162109375	2	508.721741	1015.42893	-0.2649	-0.00013476	-3.9844	-0.002027	-4.2493	-0.0021617	508.71957936194843	34.017	0.47836	33.961	33.651	34.13	-0.056385					22	10	3	0	0	0	0.3636	1	2102	2102		60.294	6.9425	1	76706			3777	14249	2484	2487	4339	4339		208			-0.07816849995117536
CPSPATLLL	9	Carbamidomethyl (C)	_C(Carbamidomethyl (C))PSPATLLL_	C(1)PSPATLLL		C(46)PSPATLLL		0	1	0			REV__ENST00000368069.7_1_1:160259783-160259930:-|nuORF	REV__ENST00000368069.7_1_1:160259783-160259930:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.267333984375	2	486.265153	970.515753	1.0382	0.00050483	3.0908	0.0015029	4.1289	0.0020078	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.62081	1	8807	8807		45.952	6.6991	1	1819100	+		3778	25586	2485	2488	4340	4340	313				0.029315958226106886
CPSPSPSH	8	Unmodified	_CPSPSPSH_					0	0	0			REV__ENST00000586847.1_1_18:77794393-77797276:+|nuORF	REV__ENST00000586847.1_1_18:77794393-77797276:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.1763610839844	2	406.173795	810.333038	2.4719	0.001004	1.6254	0.00066021	4.0973	0.0016642	406.17475072554515	96.427	1.6527	96.832	96.34	97.993	0.40498					89	39	4	0	0	0	0.91005	1	11539	11539		42.474	5.446	1	1443200	+		3779	29114	2486	2489	4341	4341					-0.07971538519359456
CPSPSPSH	8	Unmodified	_CPSPSPSH_					0	0	0			REV__ENST00000586847.1_1_18:77794393-77797276:+|nuORF	REV__ENST00000586847.1_1_18:77794393-77797276:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.1764221191406	2	406.173795	810.333038	1.6845	0.0006842	2.4464	0.00099367	4.1309	0.0016779	406.1750996382843	99.289	1.0283	99.652	99.329	100.36	0.36292					64	25	4	0	0	0	0.86288	1	12073	12073		26.796	1.3459	1	2334600	+		3780	29114	2486	2489	4342	4342					-0.07971538519359456
CPSVCESSHF	10	Unmodified	_CPSVCESSHF_					0	0	0		ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.2923583984375	2	548.215334	1094.41612	-0.19554	-0.0001072	-0.019296	-1.0578E-05	-0.21483	-0.00011778	548.2153148897706	54.3	0.37706	54.707	54.53	54.907	0.40663					14	8	2	0	0	0	0.37624	1	5518	5518		23.042	10.836	1	215320			3781	4549	2487	2490	4343	4343					-0.12731589853660807
CPTLNWLLVPL	11	Unmodified	_CPTLNWLLVPL_					0	0	0		ENST00000260585.11_1_2:26569100-26611935:+|nuORF;ENSG00000138018|ENST00000260585|SELENOI	ENST00000260585.11_1_2:26569100-26611935:+|nuORF	ENST00000260585.11_1_2:26569100-26611935:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8924560546875	2	634.857209	1267.69987	1.4979	0.00095097	3.5097	0.0022282	5.0077	0.0031792	634.8601443809537	105.59	0.33662	105.75	105.55	105.88	0.15924					16	8	3	0	0	0	0.17383	1	11262	11262		31.53	0	1	620490			3782	4254	2488	2491	4344	4344					0.0767236425331248
CPTPPSSSAHT	11	Unmodified	_CPTPPSSSAHT_					0	0	0		ENST00000597661.5_1_19:19206933-19217139:+|nuORF	ENST00000597661.5_1_19:19206933-19217139:+|nuORF	ENST00000597661.5_1_19:19206933-19217139:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7708740234375	2	542.740031	1083.46551	0.54826	0.00029756	-1.2644	-0.00068623	-0.71612	-0.00038867	542.7393885130282	27.622	0.44986	27.584	27.345	27.795	-0.038525					16	10	2	0	0	0	0.1728	1	1340	1340		39.253	20.928	1	27814			3783	14363	2489	2492	4345	4345					-0.07288558573213777
CPVKIIRK	8	Unmodified	_CPVKIIRK_					0	0	0			REV__nc|ENSG00000278023|Q8NG50-11|RDM1	REV__nc|ENSG00000278023|Q8NG50-11|RDM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.805419921875	2	478.807322	955.600092	-2.669	-0.0012779	-0.055798	-2.6716E-05	-2.7248	-0.0013047	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.80706	1	2620	2620		19.36	0	1	370420	+		3784	30273	2490	2493	4346	4346					0.12051591430019926
CPVLKRTIP	9	Unmodified	_CPVLKRTIP_					0	0	0		ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8091430664062	2	513.810062	1025.60557	0.090876	4.6693E-05	-2.2226	-0.001142	-2.1317	-0.0010953	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.76255	1	4344	4344		35.618	11.416	1	1448700			3785	5781	2491	2494	4347	4347					0.09379270221802471
CPYRLPILSR	10	Unmodified	_CPYRLPILSR_					0	0	0			REV__ENST00000493115.1_1_20:30451708-30457369:-|nuORF	REV__ENST00000493115.1_1_20:30451708-30457369:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.91204833984375	3	406.565626	1216.67505	1.4551	0.00059159	3.4807	0.0014151	4.9358	0.0020067	406.5673145661931	37.249	0.49573	37.563	37.329	37.825	0.31312					20	11	3	0	0	0	0.37624	1	3015	3015		58.246	18.373	1	49426	+		3786	27684	2492	2495	4348	4348					0.07537729170576313
CPYRLPILSR	10	Unmodified	_CPYRLPILSR_					0	0	0			REV__ENST00000493115.1_1_20:30451708-30457369:-|nuORF	REV__ENST00000493115.1_1_20:30451708-30457369:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	406.565626	1216.67505	0.7014	0.00028517	5.9057	0.0024011	6.6071	0.0026862	406.5674208871404	37.114	0.33855	37.6	37.451	37.789	0.48581	0.01884	0.0011252	NaN	58.246	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54100	+		3787	27684	2492	2495							0.07537729170576313
CQCKLGDWT	9	Unmodified	_CQCKLGDWT_					0	0	0			REV__nc|ENSG00000169876|Q685J3-2|MUC17	REV__nc|ENSG00000169876|Q685J3-2|MUC17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.2313842773438	2	527.228245	1052.44194	0.15164	7.995E-05	1.949	0.0010276	2.1007	0.0011075	527.2292357505893	19.527	0.46033	19.454	19.263	19.724	-0.073702					17	12	2	0	0	0	0.78536	1	452	452		29.15	2.4566	1	33525	+		3788	21610	2493	2496	4349	4349					-0.08218695611390103
CQCTNCDD	8	Unmodified	_CQCTNCDD_					0	0	0			REV__nc|ENSG00000101384|P78504-2|JAG1	REV__nc|ENSG00000101384|P78504-2|JAG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.2889404296875	2	451.12787	900.241188	-1.785	-0.00080527	0.52424	0.0002365	-1.2608	-0.00056878	451.12872030137197	43.191	0.47527	43.965	43.708	44.183	0.7738					19	11	2	0	0	0	0.4196	1	3877	3877		10.866	2.0432	1	291320	+		3789	17275	2494	2497	4350	4350					-0.21292332990367413
CQCVRIRI	8	Unmodified	_CQCVRIRI_					0	0	0		ENST00000556469.5_1_14:50649281-50666455:-|nuORF	ENST00000556469.5_1_14:50649281-50666455:-|nuORF	ENST00000556469.5_1_14:50649281-50666455:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2353515625	2	495.770414	989.526275	-1.1451	-0.00056771	2.6597	0.0013186	1.5146	0.00075092	495.7726442486345	46.684	0.56307	47.607	47.395	47.958	0.92315					16	12	2	0	0	0	0.4196	1	4448	4448		30.504	0	1	783230			3790	13748	2495	2498	4351	4351					0.031092999960151246
CQEKDTGFVCS	11	Unmodified	_CQEKDTGFVCS_					0	0	0		ENSG00000136014|ENST00000258499|USP44	ENSG00000136014|ENST00000258499|USP44	ENSG00000136014|ENST00000258499|USP44	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5643310546875	3	406.170613	1215.49001	-0.18905	-7.6785E-05	-3.8224	-0.0015525	-4.0114	-0.0016293	406.5027602356164	59.881	0.17645	59.867	59.719	59.896	-0.013733					6	4	2	0	0	0	0.17648	1	5502	5502		11.455	0	1	46426			3791	4082	2496	2499	4352	4352					-0.10911666482002147
CQGVVRVE	8	Unmodified	_CQGVVRVE_					0	0	0			REV__ENST00000527193.1_1_19:46878896-46886865:+|nuORF	REV__ENST00000527193.1_1_19:46878896-46886865:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	444.2454528808594	2	445.231645	888.448736	1.3811	0.0006149	1.5938	0.00070961	2.9749	0.0013245	445.2330292034741	107.04	0.64464	107.15	106.82	107.47	0.10396					48	19	4	0	0	0	0.4196	1	13025	13025		30.504	7.4612	1	1086000	+		3792	28223	2497	2500	4353	4353					4.985331497664447E-05
CQIATRRL	8	Unmodified	_CQIATRRL_					0	0	0		nc|ENSG00000079156|Q9BZF3-6|OSBPL6	nc|ENSG00000079156|Q9BZF3-6|OSBPL6	nc|ENSG00000079156|Q9BZF3-6|OSBPL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.770263671875	2	480.774011	959.533469	-2.5003	-0.0012021	-2.9045	-0.0013964	-5.4048	-0.0025985	480.7724817241375	41.101	0.70321	41.107	40.803	41.506	0.0065727					33	18	2	0	0	0	0.87259	1	2999	2999		58.782	2.0609	1	446290			3793	14786	2498	2501	4354	4354					0.052083558681147224
CQILPMNG	8	Unmodified	_CQILPMNG_					0	0	0			REV__chr1:45688303-45690974|55|18.96|0.46|5.35|+|1|None,TMEM69|1	REV__chr1:45688303-45690974|55|18.96|0.46|5.35|+|1|None,TMEM69|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26318359375	2	438.209324	874.404094	0.27161	0.00011902	-2.0451	-0.00089617	-1.7735	-0.00077714	438.2089884630818	35.526	0.72031	35.774	35.398	36.118	0.24769					30	18	3	0	0	0	0.4196	1	2737	2737		50.025	12.865	1	237740	+		3794	15452	2499	2502	4355	4355					-0.03813161806192511
CQILPMNG	8	Unmodified	_CQILPMNG_					0	0	0			REV__chr1:45688303-45690974|55|18.96|0.46|5.35|+|1|None,TMEM69|1	REV__chr1:45688303-45690974|55|18.96|0.46|5.35|+|1|None,TMEM69|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2635803222656	2	438.209324	874.404094	0.30201	0.00013234	-1.5912	-0.00069728	-1.2892	-0.00056494	438.2080700759826	34.896	0.46373	35.106	34.897	35.36	0.21003					20	11	3	0	0	0	0.4196	1	2641	2641		57.811	22.193	1	265390	+		3795	15452	2499	2502	4356	4356					-0.03813161806192511
CQKRMHLN	8	Unmodified	_CQKRMHLN_					0	0	0		ENST00000586314.5_1_18:31432808-31708839:-|nuORF;nc|ENSG00000101746|O94818-2|NOL4;nc|ENSG00000101746|O94818-3|NOL4;ENSG00000101746|ENST00000261592|NOL4	ENST00000586314.5_1_18:31432808-31708839:-|nuORF	ENST00000586314.5_1_18:31432808-31708839:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.28662109375	2	515.257671	1028.50079	-0.64932	-0.00033457	2.5413	0.0013094	1.892	0.00097485	515.2590943253022	72.907	0.20647	73.292	73.207	73.413	0.38581					5	4	2	0	0	0	0.4196	1	8167	8167		35.201	0	1	31469			3796	1957	2500	2503	4357	4357					-0.012321745263989214
CQLGVKLL	8	Unmodified	_CQLGVKLL_					0	0	0		ENSG00000135476|ENST00000257934|ESPL1	ENSG00000135476|ENST00000257934|ESPL1	ENSG00000135476|ENST00000257934|ESPL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2653503417969	2	437.264956	872.515359	-2.1128	-0.00092385	3.801	0.001662	1.6882	0.00073819	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.86288	1	764	764		26.796	2.5934	1	1366900			3797	4028	2501	2504	4358	4358					0.0740022089340755
CQLLDAAVTAY	11	Unmodified	_CQLLDAAVTAY_					0	0	0		nc|ENSG00000132003|Q9H7M6|ZSWIM4;ENSG00000132003|ENST00000590508|ZSWIM4	nc|ENSG00000132003|Q9H7M6|ZSWIM4	nc|ENSG00000132003|Q9H7M6|ZSWIM4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.2901000976562	2	584.289356	1166.56416	-0.75898	-0.00044346	1.804	0.0010541	1.045	0.0006106	584.2902769632242	75.979	0.99621	76.374	75.532	76.528	0.39507					33	23	2	0	0	0	0.39037	1	8590	8590		60.118	8.9256	1	525770			3798	3759	2502	2505	4359	4359					-0.01245955328204218
CQLLVKLSQ	9	Unmodified	_CQLLVKLSQ_					0	0	0		ENST00000376560.7_2_6:30530414-30530753:+|nuORF	ENST00000376560.7_2_6:30530414-30530753:+|nuORF	ENST00000376560.7_2_6:30530414-30530753:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.8004760742188	2	516.299527	1030.5845	-0.58657	-0.00030285	2.6779	0.0013826	2.0913	0.0010798	516.3016574074306	57.099	1.4441	57.132	56.795	58.239	0.033184					114	45	4	0	0	0	0.6204	1	5169	5169		45.972	3.5761	1	705170			3799	10820	2503	2506	4360	4360					0.07043260122304673
CQNSLLCR	8	Unmodified	_CQNSLLCR_					0	0	0		nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2;ENST00000521126.1_1_5:167589722-167617553:+|nuORF	nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.7225646972656	2	468.723129	935.431706	0.4939	0.0002315	-0.12315	-5.7725E-05	0.37074	0.00017378	468.72287741489856	69.82	0.72598	69.949	69.77	70.496	0.1291					62	36	2	0	0	0	0.87792	1	6343	6343		31.53	3.6476	1	1036600			3800	14976	2504	2507	4361	4361					-0.03859258545969624
CQNTCCQPT	9	Unmodified	_CQNTCCQPT_					0	0	0		ENSG00000241595|ENST00000334109|KRTAP9-4	ENSG00000241595|ENST00000334109|KRTAP9-4	ENSG00000241595|ENST00000334109|KRTAP9-4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	499.2745361328125	2	499.180437	996.346321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.722	1	16.64	16.14	17.14	-0.0821								0	0	0	0.30613	1	166	166		42.396	9.5837	1				3801	8794	2505	2508	4362	4362					-0.1519979179394113
CQRAILIAVF	10	Unmodified	_CQRAILIAVF_					0	0	0			REV__nc|ENSG00000184634|Q93074-3|MED12	REV__nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3292236328125	2	567.328619	1132.64269	-0.51077	-0.00028978	2.6783	0.0015195	2.1675	0.0012297	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.86452	1	9453	9453		30.504	0.18592	1	11042000	+		3802	22696	2506	2509	4363	4363					0.08166941767581193
CQRRLEAAY	9	Carbamidomethyl (C)	_C(Carbamidomethyl (C))QRRLEAAY_	C(1)QRRLEAAY		C(51)QRRLEAAY		0	1	0		ENST00000436520.1_1_X:33059580-33059835:+|nuORF;ENSG00000171530|ENST00000380377|TBCA;nc|ENSG00000171530|O75347-2|TBCA	ENST00000436520.1_1_X:33059580-33059835:+|nuORF	ENST00000436520.1_1_X:33059580-33059835:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.7884521484375	2	583.790389	1165.56623	-0.18074	-0.00010551	-3.5396	-0.0020664	-3.7203	-0.0021719	583.7881372408947	68.118	0.63609	68.082	67.798	68.434	-0.036301					59	24	3	0	0	0	0.51307	1	6540	6540		51.335	7.2187	1	436950			3803	6679	2507	2510	4364	4364	84				-0.009934817997191203
CQRVRLLVLI	10	Unmodified	_CQRVRLLVLI_					0	0	0			REV__ENSG00000254656|ENST00000649591|RTL1	REV__ENSG00000254656|ENST00000649591|RTL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.2550048828125	3	404.925154	1211.75363	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.031	1	26.031	25.531	26.531	0								0	0	0	0.45132	1	978	978		36.447	2.5251	1		+		3804	23893	2508	2511	4365	4365					0.15622581475668085
CQYFLLDI	8	Unmodified	_CQYFLLDI_					0	0	0		ENSG00000174607|ENST00000310836|UGT8	ENSG00000174607|ENST00000310836|UGT8	ENSG00000174607|ENST00000310836|UGT8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.7530822753906	2	507.751879	1013.4892	0.84789	0.00043052	1.7009	0.00086363	2.5488	0.0012941	507.7524998605722	62.525	1.3198	63.08	62.559	63.879	0.55449					81	30	4	0	0	0	0.83456	1	6728	6728		60.972	5.4677	1	1695100			3805	6951	2509	2512	4366	4366					-0.017000930687345317
CRACRGTVKLM	11	Oxidation (M)	_CRACRGTVKLM(Oxidation (M))_		CRACRGTVKLM(1)		CRACRGTVKLM(48)	0	0	1			REV__ENST00000409980.5_1_7:27868299-27868437:+|nuORF	REV__ENST00000409980.5_1_7:27868299-27868437:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.319580078125	2	627.317402	1252.62025	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.786	1	61.815	61.315	62.315	0.029575								0	0	0	0.56276	1	5759	5759		47.96	6.5329	1		+		3806	26362	2510	2513	4367	4367		406			0.0040465103600126895
CRAGTTAY	8	Unmodified	_CRAGTTAY_					0	0	0			REV__ENST00000233630.10_1_2:74735069-74735567:-|nuORF	REV__ENST00000233630.10_1_2:74735069-74735567:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.69256591796875	2	421.694895	841.375237	-1.8233	-0.00076886	-2.2572	-0.00095186	-4.0805	-0.0017207	421.69368199516344	44.003	0.45446	44.003	43.787	44.241	0					17	10	2	0	0	0	0.90465	1	3165	3165		40.573	1.7665	1	102090	+		3807	24205	2511	2514	4368	4368					-0.05179563110982599
CRATLEQDVQ	10	Unmodified	_CRATLEQDVQ_					0	0	0			REV__ENST00000562846.1_1_16:67595386-67595647:-|nuORF	REV__ENST00000562846.1_1_16:67595386-67595647:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.803466796875	2	581.779687	1161.54482	-0.86197	-0.00050148	1.2637	0.00073522	0.40177	0.00023374	581.7800616099026	65.125	0.28332	65.129	65.023	65.307	0.0046921					10	8	2	0	0	0	0.37624	1	6103	6103		88.177	0	1	54623	+		3808	28808	2512	2515	4369	4369					-0.029489116190688947
CRDAVEVLI	9	Unmodified	_CRDAVEVLI_					0	0	0		ENST00000560523.5_1_15:70964229-70991966:-|nuORF;nc|ENSG00000137831|Q9BZF9-2|UACA;ENSG00000137831|ENST00000322954|UACA	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.8102111816406	2	509.273509	1016.53247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.071	1	72.202	71.702	72.702	0.13145								0	0	0	0.301	1	6582	6582		30.318	1.1682	1				3809	4240	2513	2516	4370	4370					0.024860967085373886
CRDCCEDF	8	Unmodified	_CRDCCEDF_					0	0	0		ENSG00000147130|ENST00000314425|ZMYM3;nc|ENSG00000147130|Q14202-2|ZMYM3;ENST00000489332.1_1_X:70467340-70473105:-|nuORF	ENSG00000147130|ENST00000314425|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.5972900390625	2	495.659338	989.304122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.801	1	67.352	66.852	67.852	0.55071								0	0	0	0.30252	1	7325	7325		19.36	1.0356	1				3810	4884	2514	2517	4371	4371					-0.19095767202327352
CRDLSLAALL	10	Unmodified	_CRDLSLAALL_					0	0	0			REV__ENSG00000175514|ENST00000312457|GPR152	REV__ENSG00000175514|ENST00000312457|GPR152	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.800048828125	2	537.802434	1073.59032	-0.31613	-0.00017001	-2.8357	-0.0015251	-3.1519	-0.0016951	537.8006138106188	19.034	0.52099	18.405	18.19	18.711	-0.6296					20	11	3	0	0	0	0.80179	1	458	458		39.253	1.4413	1	132070	+		3811	22070	2515	2518	4372	4372					0.056463586339759786
CRELSVLKLLH	11	Unmodified	_CRELSVLKLLH_					0	0	0		ENST00000549866.5_1_12:100377893-100378199:-|nuORF	ENST00000549866.5_1_12:100377893-100378199:-|nuORF	ENST00000549866.5_1_12:100377893-100378199:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.5941162109375	3	437.591952	1309.75403	0.016944	7.4144E-06	3.9691	0.0017368	3.986	0.0017442	437.59358898344584	17.111	0.51696	17.173	16.92	17.437	0.062601					54	22	4	0	0	0	0.74405	1	210	210		23.378	2.3457	1	287190			3812	13645	2516	2519	4373	4373					0.11153956404859855
CRGDNRFNY	9	Unmodified	_CRGDNRFNY_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.7508544921875	2	572.751264	1143.48798	-0.70601	-0.00040437	2.6325	0.0015078	1.9265	0.0011034	572.7529881567372	56.524	0.69558	56.92	56.676	57.371	0.39672					25	15	2	0	0	0	0.44421	1	5855	5855		54.776	3.5836	1	662010	+		3813	20437;29946	2517	2520	4374	4374					-0.07802914384933501
CRKKLPVL	8	Unmodified	_CRKKLPVL_					0	0	0		ENST00000377813.5_2_20:17660668-17662761:-|nuORF	ENST00000377813.5_2_20:17660668-17662761:-|nuORF	ENST00000377813.5_2_20:17660668-17662761:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8060607910156	2	478.807322	955.600092	-1.2024	-0.0005757	-0.89347	-0.0004278	-2.0958	-0.0010035	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.80963	1	2723	2723		15.636	0.97212	1	361300			3814	10847	2518	2521	4375	4375					0.12051591429997188
CRKKLPVL	8	Unmodified	_CRKKLPVL_					0	0	0		ENST00000377813.5_2_20:17660668-17662761:-|nuORF	ENST00000377813.5_2_20:17660668-17662761:-|nuORF	ENST00000377813.5_2_20:17660668-17662761:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8070373535156	2	478.807322	955.600092	-0.92451	-0.00044266	-1.2507	-0.00059887	-2.1753	-0.0010415	478.80664804898805	39.433	1.9403	39.444	38.3	40.24	0.010708					89	52	2	0	0	0	0.86288	1	2497	2497		26.796	6.3143	1	287670			3815	10847	2518	2521	4376	4376					0.12051591429997188
CRLAGTAL	8	Unmodified	_CRLAGTAL_					0	0	0		ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2127685546875	2	402.723455	803.432358	0.19062	7.6769E-05	-3.9055	-0.0015728	-3.7149	-0.0014961	402.72170155931406	39.21	0.97642	39.578	39.134	40.11	0.36797					38	22	2	0	0	0	0.4196	1	3281	3281		40.573	1.7665	1	103720			3816	3419	2519	2522	4377	4377					0.02277904165396194
CRLAGTAL	8	Unmodified	_CRLAGTAL_					0	0	0		ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	402.723455	803.432358	0.1017	4.0957E-05	-2.0193	-0.00081323	-1.9176	-0.00077227	402.72170035877394	39.965	0.80757	39.935	39.322	40.13	-0.030273	0.22766	0.00053979	NaN	40.573	30	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65590			3817	3419	2519	2522							0.02277904165396194
CRLAGTAL	8	Unmodified	_CRLAGTAL_					0	0	0		ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	402.723455	803.432358	-1.3644	-0.00054948	-2.3171	-0.00093314	-3.6815	-0.0014826	402.72235077947556	39.788	0.67748	39.744	39.287	39.965	-0.043694	0.036801	0.00029997	NaN	40.573	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80045			3818	3419	2519	2522							0.02277904165396194
CRLAGTAL	8	Unmodified	_CRLAGTAL_					0	0	0		ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	402.723455	803.432358	-1.9039	-0.00076674	-1.5472	-0.00062311	-3.4511	-0.0013899	402.7227085707351	39.788	0.65325	39.794	39.337	39.99	0.0065002	0.087141	0.00092003	NaN	40.573	29	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59072			3819	3419	2519	2522							0.02277904165396194
CRLAGTAL	8	Unmodified	_CRLAGTAL_					0	0	0		ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	402.723455	803.432358	-0.20943	-8.4341E-05	-3.6231	-0.0014591	-3.8326	-0.0015435	402.72180060555144	39.634	0.59361	39.586	39.381	39.975	-0.04789	-0.12061	-0.00075198	NaN	40.573	17	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82041			3820	3419	2519	2522							0.02277904165396194
CRLAGTAL	8	Unmodified	_CRLAGTAL_					0	0	0		ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	ENSG00000125841|ENST00000382285|NRSN2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	402.723455	803.432358	-1.2999	-0.00052351	-2.248	-0.00090531	-3.5479	-0.0014288	402.72238811476524	39.051	0.86091	39.605	39.236	40.097	0.5545	-0.10162	0.00035563	NaN	40.573	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127560			3821	3419	2519	2522							0.02277904165396194
CRLDTTRLQ	9	Carbamidomethyl (C)	_C(Carbamidomethyl (C))RLDTTRLQ_	C(1)RLDTTRLQ		C(93)RLDTTRLQ		0	1	0			REV__ENST00000550944.5_1_14:31028438-31050286:+|nuORF	REV__ENST00000550944.5_1_14:31028438-31050286:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.8037719726562	2	581.803497	1161.59244	0.11403	6.6344E-05	0.29242	0.00017013	0.40646	0.00023648	581.8035838058198	64.735	1.1415	64.7	64.269	65.41	-0.034798					108	38	4	0	0	0	0.096131	1	6202	6202		93.195	10.955	1	2150000	+		3822	28602	2520	2523	4378	4378	348				0.018107873717553957
CRLGPGGPF	9	Unmodified	_CRLGPGGPF_					0	0	0			REV__ENST00000510104.5_1_5:140071123-140075505:+|nuORF	REV__ENST00000510104.5_1_5:140071123-140075505:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.228759765625	2	452.228905	902.443257	1.1697	0.00052896	-3.091	-0.0013978	-1.9213	-0.00086888	452.22766943283847	107.06	0.98818	107.17	106.77	107.76	0.10396					98	37	5	0	0	0	0.7932	1	13063	13063		26.796	1.3459	1	2682300	+		3823	27946	2521	2524	4379	4379					-0.01186693460317656
CRLRSLRLRIW	11	Unmodified	_CRLRSLRLRIW_					0	0	0		chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.299560546875	3	491.297873	1470.87179	2.8436	0.001397	-0.34153	-0.00016779	2.502	0.0012292	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.7896	1	13069	13069		13.508	0	1	3274400			3824	423	2522	2525	4380	4380					0.1551895378415793
CRLRSLRLRIW	11	Unmodified	_CRLRSLRLRIW_					0	0	0		chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.2991638183594	3	491.297873	1470.87179	-1.6433	-0.00080736	4.0801	0.0020045	2.4368	0.0011972	491.29989994229794	112.5	0.70615	112.47	112.28	112.99	-0.032333					41	19	3	0	0	0	0.8498	1	12036	12036		6.001	2.5923	1	409620			3825	423	2522	2525	4381	4381					0.1551895378415793
CRLTVKGG	8	Unmodified	_CRLTVKGG_					0	0	0			REV__ENST00000444199.1_1_19:55208384-55209490:+|nuORF	REV__ENST00000444199.1_1_19:55208384-55209490:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.23968505859375	2	417.23673	832.458907	3.0856	0.0012874	3.1331	0.0013073	6.2187	0.0025947	417.2376917787685	88.314	2.8848	88.365	87.296	90.181	0.050415					161	67	3	0	0	0	0.84341	1	9080	9080		24.203	0	1	1607200	+		3826	26785	2523	2526	4382	4382					0.03597593056736059
CRPKDYKVIR	10	Unmodified	_CRPKDYKVIR_					0	0	0		ENST00000603831.5_1_1:48764387-48865024:-|nuORF;nc|ENSG00000132122|Q9NWH7-2|SPATA6;ENSG00000132122|ENST00000371847|SPATA6	ENST00000603831.5_1_1:48764387-48865024:-|nuORF	ENST00000603831.5_1_1:48764387-48865024:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	639.3584594726562	2	639.360982	1276.70741	-0.079049	-5.0541E-05	3.5791	0.0022883	3.5	0.0022378	639.3630825016428	110.79	0.6934	110.73	110.5	111.2	-0.059937					49	22	3	0	0	0	0.84816	1	12042	12042		17.468	1.8262	1	140760			3827	3764	2524	2527	4383	4383					0.0801251657355806
CRPNGLKLNL	10	Unmodified	_CRPNGLKLNL_					0	0	0		ENSG00000243244|ENST00000404752|STON1;nc|ENSG00000243244|Q9Y6Q2-3|STON1;nc|ENSG00000243244|Q9Y6Q2-2|STON1;ENSG00000068781|ENST00000394754|STON1-GTF2A1L	ENSG00000243244|ENST00000404752|STON1	ENSG00000243244|ENST00000404752|STON1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.3140869140625	2	564.321325	1126.6281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.901	1	56.873	56.373	57.373	-0.02866								0	0	0	0.45132	1	5225	5225		27.882	0	1				3828	1206	2525	2528	4384	4384					0.06984869619418532
CRQNVVSDLL	10	Unmodified	_CRQNVVSDLL_					0	0	0			REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	573.8054809570312	2	573.800423	1145.58629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.915	1	68.981	68.481	69.481	0.065506								0	0	0	0.45132	1	6201	6201		26.693	1.1189	1		+		3829	18928	2526	2529	4385	4385					0.019322691402749115
CRRALRVLRER	11	Unmodified	_CRRALRVLRER_					0	0	0			REV__ENSG00000215045|ENST00000457091|GRID2IP	REV__ENSG00000215045|ENST00000457091|GRID2IP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6236267089844	3	476.621127	1426.84155	2.8112	0.0013399	2.5746	0.0012271	5.3858	0.002567	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.76892	1	12411	12411		17.833	0	1	2689700	+		3830	23675	2527	2530	4386	4386					0.14520595118983692
CRRLPLQLL	9	Unmodified	_CRRLPLQLL_					0	0	0		ENST00000264638.8_1_17:40842913-40843191:+|nuORF	ENST00000264638.8_1_17:40842913-40843191:+|nuORF	ENST00000264638.8_1_17:40842913-40843191:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	556.3442993164062	2	556.342061	1110.66957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.96	1	113.07	112.57	113.57	0.10638								0	0	0	0.35896	1	12144	12144		12.207	0.69583	1				3831	9483	2528	2531	4387	4387					0.11866050378785076
CRRLYDLA	8	Unmodified	_CRRLYDLA_					0	0	0			REV__ENSG00000112379|ENST00000251691|ARFGEF3	REV__ENSG00000112379|ENST00000251691|ARFGEF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.457275390625	2	505.266019	1008.51748	-0.79453	-0.00040145	-3.1654	-0.0015994	-3.9599	-0.0020008	505.2643360860931	44.643	0.43874	45.107	44.825	45.264	0.46313					14	10	2	0	0	0	0.4196	1	4083	4083		30.504	1.3541	1	172300	+		3832	17944	2529	2532	4388	4388					0.01356649631190976
CRSCNFCRDL	10	Unmodified	_CRSCNFCRDL_					0	0	0		ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF;ENST00000534922.5_1_12:133202008-133209092:-|nuORF	ENSG00000177084|ENST00000320574|POLE	ENSG00000177084|ENST00000320574|POLE	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.8789367675781	3	406.172182	1215.49472	-1.9384	-0.00078732	-3.946	-0.0016028	-5.8844	-0.0023901	406.1715775927871	18.531	0.35083	18.575	18.375	18.726	0.044048					20	15	2	0	0	0	0.37624	1	331	331		12.957	4.5502	1	25765			3833	7117	2530	2533	4389	4389					-0.10441060820221537
CRSFQSWMRIR	11	Unmodified	_CRSFQSWMRIR_					0	0	0		ENST00000452075.7_1_10:43046018-43047669:-|nuORF	ENST00000452075.7_1_10:43046018-43047669:-|nuORF	ENST00000452075.7_1_10:43046018-43047669:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.5787658691406	3	490.57994	1468.71799	0.038769	1.9019E-05	-1.0293	-0.00050496	-0.99054	-0.00048594	490.57945164998375	18.626	1.042	18.005	17.767	18.809	-0.62141					64	23	6	0	0	0	0.76892	1	446	446		17.833	1.3033	1	1664800			3834	11913	2531	2534	4390	4390					0.0023817595633772726
CRSLILLFTK	10	Unmodified	_CRSLILLFTK_					0	0	0			REV__ENST00000274000.9_2_4:113189899-113190001:+|nuORF	REV__ENST00000274000.9_2_4:113189899-113190001:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3626098632812	2	597.357376	1192.7002	3.0849	0.0018428	-1.397	-0.00083449	1.688	0.0010083	597.3562180293547	100.36	3.052	100.31	99.202	102.25	-0.052116					175	71	4	0	0	0	0.85834	1	10975	10975		22.58	1.6327	1	3981300	+		3835	24562	2532	2535	4391	4391					0.11155783973163125
CRSRIRKAS	9	Unmodified	_CRSRIRKAS_					0	0	0		ENST00000300056.7_1_15:90226032-90226200:-|nuORF	ENST00000300056.7_1_15:90226032-90226200:-|nuORF	ENST00000300056.7_1_15:90226032-90226200:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.806396484375	2	538.808916	1075.60328	-0.69163	-0.00037266	-3.4267	-0.0018464	-4.1184	-0.002219	538.8070299475025	90.865	3.8094	90.865	89.559	93.368	0					216	88	3	0	0	0	0.73802	1	8770	8770		37.812	2.6595	1	563820			3836	9788	2533	2536	4392	4392					0.0685023453672784
CRSRPRPVAKL	11	Unmodified	_CRSRPRPVAKL_					0	0	0			REV__ENSG00000131910|ENST00000254227|NR0B2	REV__ENSG00000131910|ENST00000254227|NR0B2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8817749023438	2	641.879873	1281.74519	1.6835	0.0010806	2.3587	0.001514	4.0421	0.0025946	641.8812254430574	95.773	2.4493	95.82	94.333	96.782	0.046989					202	57	5	0	0	0	0.70737	1	10082	10082		30.318	2.2362	1	1550900	+		3837	18977	2534	2537	4393	4393					0.11559027559064816
CRSTLKVVGS	10	Unmodified	_CRSTLKVVGS_					0	0	0			REV__nc|ENSG00000100258|Q9BU23-3|LMF2	REV__nc|ENSG00000100258|Q9BU23-3|LMF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.29052734375	2	525.292233	1048.56991	0.36636	0.00019244	-3.555	-0.0018674	-3.1887	-0.001675	525.2902266523242	18.32	0.44437	17.699	17.539	17.983	-0.62141					19	9	3	0	0	0	0.86587	1	378	378		29.17	0.020503	1	195600	+		3838	17159	2535	2538	4394	4394					0.04757187974155386
CRVSPFRCPGK	11	Unmodified	_CRVSPFRCPGK_					0	0	0		ENST00000488968.1_1_8:21952029-21952221:+|nuORF	ENST00000488968.1_1_8:21952029-21952221:+|nuORF	ENST00000488968.1_1_8:21952029-21952221:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	625.3245849609375	2	625.31826	1248.62197	-0.37651	-0.00023544	2.9973	0.0018743	2.6208	0.0016388	625.3199036039578	64.522	1.0153	64.56	64.22	65.236	0.037849					73	33	3	0	0	0	0.53361	1	5725	5725		49.536	3.5638	1	320220			3839	12643	2536	2539	4395	4395					0.0076002811624675815
CRYSASAHPA	10	Unmodified	_CRYSASAHPA_					0	0	0			REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.74267578125	2	531.742908	1061.47126	0.37984	0.00020198	-1.2968	-0.00068954	-0.91692	-0.00048757	531.7420122242892	41.862	0.6606	41.831	41.583	42.244	-0.030991					32	15	3	0	0	0	0.57924	1	3093	3093		51.193	20.689	1	422650	+		3840	24288	2537	2540	4396	4396					-0.0570141527089163
CRYSASAHPA	10	Unmodified	_CRYSASAHPA_					0	0	0			REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.7420043945312	2	531.742908	1061.47126	-0.58341	-0.00031022	-0.44401	-0.0002361	-1.0274	-0.00054632	531.7424675349406	41.841	0.61122	41.802	41.491	42.103	-0.038223					36	14	3	0	0	0	0.6116	1	3184	3184		49.442	1.482	1	453650	+		3841	24288	2537	2540	4397	4397					-0.0570141527089163
CRYSASAHPA	10	Unmodified	_CRYSASAHPA_					0	0	0			REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.7421264648438	2	531.742908	1061.47126	-0.59028	-0.00031388	-0.6334	-0.00033681	-1.2237	-0.00065068	531.742394862597	41.771	0.82603	41.774	41.461	42.287	0.0034142					40	19	3	0	0	0	0.51302	1	3099	3099		54.776	3.5836	1	539690	+		3842	24288	2537	2540	4398	4398					-0.0570141527089163
CRYSASAHPA	10	Unmodified	_CRYSASAHPA_					0	0	0			REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.7425537109375	2	531.742908	1061.47126	0.30096	0.00016003	-0.83247	-0.00044266	-0.53151	-0.00028263	531.742361967694	41.682	0.65017	41.755	41.474	42.124	0.073418					24	15	2	0	0	0	0.77314	1	2747	2747		40.778	1.5253	1	288370	+		3843	24288	2537	2540	4399	4399					-0.0570141527089163
CSAQLVIPRH	10	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SAQLVIPRH_	C(1)SAQLVIPRH		C(46)SAQLVIPRH		0	1	0			REV__ENST00000370647.8_1_10:99344420-99361731:+|nuORF	REV__ENST00000370647.8_1_10:99344420-99361731:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8143310546875	2	590.816407	1179.61826	-0.47583	-0.00028113	-3.0548	-0.0018048	-3.5306	-0.002086	590.8146636802912	49.04	1.1924	49.035	48.561	49.754	-0.0056419					55	26	3	0	0	0	0.67571	1	4083	4083		45.972	8.1607	1	226240	+		3844	25659	2538	2541	4400	4400	314				0.035636816140367955
CSCGHWAEGQ	10	Unmodified	_CSCGHWAEGQ_					0	0	0		nc|ENSG00000050820|P56945-6|BCAR1	nc|ENSG00000050820|P56945-6|BCAR1	nc|ENSG00000050820|P56945-6|BCAR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.1993408203125	2	539.197476	1076.3804	0.15478	8.3455E-05	2.7543	0.0014851	2.9091	0.0015686	539.198904374278	33.499	0.62766	33.668	33.356	33.984	0.16971					39	14	4	0	0	0	0.86589	1	2419	2419		29.15	3.5755	1	977430			3845	14751	2539	2542	4401	4401					-0.15473627310689153
CSEAGGFLLG	10	Unmodified	_CSEAGGFLLG_					0	0	0		ENST00000450728.1_1_2:200334820-200335477:+|nuORF	ENST00000450728.1_1_2:200334820-200335477:+|nuORF	ENST00000450728.1_1_2:200334820-200335477:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	477.21990966796875	2	477.223485	952.432418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.471	1	25.576	25.076	26.076	0.1054								0	0	0	0.45132	1	923	923		37.159	6.6555	1				3846	11894	2540	2543	4402	4402					-0.04570140625253316
CSELLFCLDW	10	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SELLFCLDW_	C(1)SELLFCLDW		C(51)SELLFC(-51)LDW		0	1	0		ENST00000577238.1_1_17:71202306-71202865:+|nuORF	ENST00000577238.1_1_17:71202306-71202865:+|nuORF	ENST00000577238.1_1_17:71202306-71202865:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.2879638671875	2	643.283217	1284.55188	-0.34774	-0.0002237	1.8308	0.0011777	1.483	0.000954	643.2846354000742	75.717	0.83273	75.671	75.418	76.251	-0.045982					43	21	3	0	0	0	0.43769	1	7476	7476		60.972	8.0352	2	538010			3847	14064	2541	2544	4403	4403	188				-0.07901315062872527
CSELLFCLDW	10	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SELLFCLDW_					0	1	0		ENST00000577238.1_1_17:71202306-71202865:+|nuORF	ENST00000577238.1_1_17:71202306-71202865:+|nuORF	ENST00000577238.1_1_17:71202306-71202865:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	643.283217	1284.55188	-0.37371	-0.0002404	5.3178	0.0034209	4.9441	0.0031805	643.2887581820826	75.945	1.0844	75.945	75.103	76.187	0	0.04701	0.0059866	NaN	60.972	61	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162650			3848	14064	2541	2544			188				-0.07901315062872527
CSELLFCLDW	10	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SELLFCLDW_					0	1	0		ENST00000577238.1_1_17:71202306-71202865:+|nuORF	ENST00000577238.1_1_17:71202306-71202865:+|nuORF	ENST00000577238.1_1_17:71202306-71202865:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	643.283217	1284.55188	-0.031704	-2.0395E-05	3.0657	0.0019721	3.034	0.0019517	643.2864993617029	75.84	1.5313	75.886	74.829	76.361	0.045959	-0.012395	0.0030891	NaN	60.972	77	45	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	494530			3849	14064	2541	2544			188				-0.07901315062872527
CSELLFCLDW	10	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SELLFCLDW_					0	1	0		ENST00000577238.1_1_17:71202306-71202865:+|nuORF	ENST00000577238.1_1_17:71202306-71202865:+|nuORF	ENST00000577238.1_1_17:71202306-71202865:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	643.283217	1284.55188	-0.032765	-2.1077E-05	-0.12241	-7.8746E-05	-0.15518	-9.9823E-05	643.2833583231892	75.61	0.66291	76.005	75.658	76.321	0.39507	0.10613	-0.0010126	NaN	60.972	24	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	295900			3850	14064	2541	2544			188				-0.07901315062872527
CSELLFCLDW	10	Carbamidomethyl (C)	_C(Carbamidomethyl (C))SELLFCLDW_					0	1	0		ENST00000577238.1_1_17:71202306-71202865:+|nuORF	ENST00000577238.1_1_17:71202306-71202865:+|nuORF	ENST00000577238.1_1_17:71202306-71202865:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	643.283217	1284.55188	1.4123	0.00090849	-1.1368	-0.00073128	0.27549	0.00017722	643.2824959544681	75.666	0.68737	76.23	75.742	76.429	0.56458	0.33163	-0.0023177	NaN	60.972	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	343730			3851	14064	2541	2544			188				-0.07901315062872527
CSFDDCECYKG	11	Unmodified	_CSFDDCECYKG_					0	0	0			REV__nc|ENSG00000259207|P05106-2|ITGB3	REV__nc|ENSG00000259207|P05106-2|ITGB3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	635.2133178710938	2	635.214674	1268.41479	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.277	1	18.277	17.777	18.777	0								0	0	0	0.56276	1	289	289		16.007	3.1951	1		+		3852	23932	2542	2545	4404	4404					-0.20867592004765356
CSFIYLLL	8	Unmodified	_CSFIYLLL_					0	0	0		chr20:52088643-52096958|39|17.92|0.01|11.17|-|1|TE_info:MER58B,MER58B_dup6592,hAT-Charlie,DNA,donor,-,52096958,52097006|ZFP64,None|1	chr20:52088643-52096958|39|17.92|0.01|11.17|-|1|TE_info:MER58B,MER58B_dup6592,hAT-Charlie,DNA,donor,-,52096958,52097006|ZFP64,None|1	chr20:52088643-52096958|39|17.92|0.01|11.17|-|1|TE_info:MER58B,MER58B_dup6592,hAT-Charlie,DNA,donor,-,52096958,52097006|ZFP64,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.2666320800781	2	486.267164	970.519776	0.080189	3.8993E-05	-0.3258	-0.00015843	-0.24562	-0.00011943	486.2668793256364	86.146	4.4086	86.59	84.867	89.275	0.44331					281	107	4	0	0	0	0.93529	1	9994	9994		52.299	13.493	1	1279400			3853	364	2543	2546	4405	4405					0.03333685316317769
CSFSNGGH	8	Unmodified	_CSFSNGGH_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.1701965332031	2	404.65577	807.296987	0.0089631	3.627E-06	-4.3929	-0.0017776	-4.3839	-0.001774	404.65370217368064	78.567	0.19531	78.513	78.44	78.635	-0.053558					7	4	2	0	0	0	0.4196	1	7841	7841		18.324	3.6603	1	13546			3854	8813	2544	2547	4406	4406					-0.11436995696203667
CSGCKIKA	8	Unmodified	_CSGCKIKA_					0	0	0			REV__ENSG00000273820|ENST00000621775|USP27X	REV__ENSG00000273820|ENST00000621775|USP27X	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.2037048339844	2	405.204041	808.39353	-0.18782	-7.6105E-05	1.9202	0.00077808	1.7324	0.00070198	405.20481127463523	77.736	2.7861	77.788	77.332	80.118	0.052696					165	97	3	0	0	0	0.84341	1	7568	7568		24.203	2.2429	1	140160	+		3855	23993	2545	2548	4407	4407					-0.018331444606360492
CSGPQWVSI	9	Unmodified	_CSGPQWVSI_					0	0	0			REV__ENST00000561606.1_1_5:10353285-10353384:-|nuORF	REV__ENST00000561606.1_1_5:10353285-10353384:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7323913574219	2	488.731477	975.448402	-0.043524	-2.1272E-05	2.6133	0.0012772	2.5698	0.0012559	488.7325875921595	55.647	0.61892	56.048	55.74	56.359	0.40102					36	14	3	0	0	0	0.073112	1	5711	5711		99.375	1.9023	1	1402500	+		3856	28784	2546	2549	4408	4408					-0.04030434388369031
CSHARLLQF	9	Unmodified	_CSHARLLQF_					0	0	0			REV__nc|ENSG00000143845|Q9NVF9-3|ETNK2	REV__nc|ENSG00000143845|Q9NVF9-3|ETNK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.7772216796875	2	537.779293	1073.54403	-0.29975	-0.0001612	-4.1309	-0.0022215	-4.4306	-0.0023827	537.7769840887917	85.641	0.82797	86.083	85.702	86.53	0.44236					54	19	4	0	0	0	0.58151	1	10001	10001		47.916	1.9434	1	804190	+		3857	19846	2547	2550	4409	4409					0.010203385225395323
CSHLGLIP	8	Unmodified	_CSHLGLIP_					0	0	0		ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENST00000482433.1_1_19:2216201-2220604:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.22698974609375	2	420.225831	838.437109	2.3003	0.00096666	2.5371	0.0010662	4.8374	0.0020328	420.2267541958877	76.314	2.1809	76.362	74.634	76.815	0.047974					151	68	3	0	0	0	0.86791	1	7311	7311		28.254	1.4582	1	250270			3858	12487	2548	2551	4410	4410					0.011427883081637447
CSIMKTSRR	9	Unmodified	_CSIMKTSRR_					0	0	0			REV__ENST00000377918.7_1_13:58208937-58209021:+|nuORF	REV__ENST00000377918.7_1_13:58208937-58209021:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.2860107421875	2	541.283886	1080.55322	0.28155	0.0001524	2.511	0.0013592	2.7926	0.0015116	541.2850882224766	21.553	0.80586	21.11	20.734	21.54	-0.44324					49	18	3	0	0	0	0.44421	1	790	790		54.776	1.8396	1	332750	+		3859	25879	2549	2552	4411	4411					0.016163638165608063
CSITGYTH	8	Unmodified	_CSITGYTH_					0	0	0		ENSG00000159461|ENST00000290649|AMFR	ENSG00000159461|ENST00000290649|AMFR	ENSG00000159461|ENST00000290649|AMFR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.1946105957031	2	441.194728	880.374903	1.4	0.00061767	2.1395	0.00094395	3.5395	0.0015616	441.1959759041456	104.26	0.74777	104.45	104.11	104.86	0.18888					31	17	3	0	0	0	0.884	1	12703	12703		33.516	4.3455	1	328410			3860	5533	2550	2553	4412	4412					-0.07006982830841935
CSLGAPEH	8	Unmodified	_CSLGAPEH_					0	0	0		ENST00000554757.1_1_14:104198706-104199352:+|nuORF	ENST00000554757.1_1_14:104198706-104199352:+|nuORF	ENST00000554757.1_1_14:104198706-104199352:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.1839904785156	2	407.18162	812.348688	2.5373	0.0010332	1.4352	0.00058439	3.9725	0.0016175	407.1824492627928	98.594	1.3554	98.956	98.525	99.88	0.36136					76	33	4	0	0	0	0.92973	1	11869	11869		50.025	9.4519	1	2813800			3861	13725	2551	2554	4413	4413					-0.06499252002322464
CSLLRLLFLN	10	Unmodified	_CSLLRLLFLN_					0	0	0			REV__ENST00000462978.1_1_1:155697409-155701908:+|nuORF	REV__ENST00000462978.1_1_1:155697409-155701908:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3447875976562	2	596.349551	1190.68455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.215	1	69.215	68.715	69.715	0								0	0	0	0.45132	1	6165	6165		20.947	0.95016	1		+		3862	27069	2552	2555	4414	4414					0.09683497456126133
CSMLVLLY	8	Unmodified	_CSMLVLLY_					0	0	0		nc|ENSG00000005206|Q8TCT7-4|SPPL2B;ENSG00000005206|ENST00000613503|SPPL2B;nc|ENSG00000005206|Q8TCT7-2|SPPL2B	nc|ENSG00000005206|Q8TCT7-4|SPPL2B	nc|ENSG00000005206|Q8TCT7-4|SPPL2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	471.24114990234375	2	471.245375	940.476197	-0.95009	-0.00044772	-2.4252	-0.0011429	-3.3753	-0.0015906	471.24408596775964	85.692	3.2441	85.877	84.627	87.871	0.18523					176	75	3	0	0	0	0.86288	1	8480	8480		26.796	3.7536	1	288030			3863	678	2553	2556	4415	4415					0.003577525475066068
CSPPADLH	8	Unmodified	_CSPPADLH_					0	0	0		ENSG00000170852|ENST00000304056|KBTBD2	ENSG00000170852|ENST00000304056|KBTBD2	ENSG00000170852|ENST00000304056|KBTBD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.19140625	2	420.189445	838.364338	0.67269	0.00028266	3.9981	0.0016799	4.6708	0.0019626	420.19102587354894	93.944	2.1015	94.105	93.532	95.634	0.16118					67	50	2	0	0	0	0.884	1	9568	9568		33.516	3.0119	1	1208700			3864	6618	2554	2557	4416	4416					-0.06130965485283468
CSPPADLH	8	Unmodified	_CSPPADLH_					0	0	0		ENSG00000170852|ENST00000304056|KBTBD2	ENSG00000170852|ENST00000304056|KBTBD2	ENSG00000170852|ENST00000304056|KBTBD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.1909484863281	2	420.189445	838.364338	1.7374	0.00073004	2.0855	0.00087629	3.8229	0.0016063	420.1905572526673	93.928	4.8779	94.369	91.96	96.838	0.44099					240	120	3	0	0	0	0.89962	6	11048	11048;11119;11130;11142;11204;11266		52.299	5.5327	1	4179400			3865	6618	2554	2557	4417;4418;4419;4420;4421;4422	4417					-0.06130965485283468
CSRHCPCPLHL	11	Unmodified	_CSRHCPCPLHL_					0	0	0			REV__ENST00000513868.6_1_8:129001487-129082505:+|nuORF	REV__ENST00000513868.6_1_8:129001487-129082505:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.291748046875	2	633.288645	1264.56274	0.32515	0.00020591	4.2218	0.0026736	4.5469	0.0028795	633.2913803529098	33.397	0.57442	33.507	33.248	33.823	0.10991					37	22	2	0	0	0	0.67778	1	1644	1644		35.152	5.982	1	140050	+		3866	27998	2555	2558	4423	4423					-0.05896191169586018
CTGCISWVRRA	11	Unmodified	_CTGCISWVRRA_					0	0	0		ENST00000370691.6_1_20:60889408-60889477:-|nuORF	ENST00000370691.6_1_20:60889408-60889477:-|nuORF	ENST00000370691.6_1_20:60889408-60889477:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.28948974609375	3	417.874353	1250.60123	2.2369	0.00093474	3.5642	0.0014894	5.8011	0.0024241	418.21139147078463	74.698	0.087303	74.743	74.685	74.772	0.04509					4	2	2	0	0	0	0.17273	1	7242	7242		29.551	12.384	1	21221			3867	10642	2556	2559	4424	4424					-0.014045622634057509
CTGPGHVQIHG	11	Unmodified	_CTGPGHVQIHG_					0	0	0			REV__ENSG00000147912|ENST00000432825|FBXO10	REV__ENSG00000147912|ENST00000432825|FBXO10	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.2642822265625	2	553.264007	1104.51346	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.23	1	73.188	72.688	73.688	-0.042015								0	0	0	0.56276	1	7180	7180		32.812	0.85756	1		+		3868	20091	2557	2560	4425	4425					-0.03461439862530824
CTHAHSISP	9	Unmodified	_CTHAHSISP_					0	0	0			REV__nc|ENSG00000071967|Q53TN4-2|CYBRD1	REV__nc|ENSG00000071967|Q53TN4-2|CYBRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	476.7208251953125	2	476.718901	951.42325	1.2436	0.00059287	2.8966	0.0013809	4.1403	0.0019737	476.72013818854134	89.073	0.91069	89.523	89.202	90.113	0.45058					47	21	3	0	0	0	0.74721	1	10511	10511		37.159	0.71236	1	743070	+		3869	29709	2558	2561	4426	4426					-0.05440489190925746
CTHQPPLPSLI	11	Unmodified	_CTHQPPLPSLI_					0	0	0			REV__nc|ENSG00000177873|Q8N2I2-2|ZNF619	REV__nc|ENSG00000177873|Q8N2I2-2|ZNF619	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	603.3219604492188	2	603.320991	1204.62743	1.0246	0.00061818	1.2971	0.00078259	2.3218	0.0014008	603.32161212346	97.932	2.0108	98.16	97.123	99.133	0.22788					77	46	2	0	0	0	0.732	1	10154	10154		26.063	0.48933	1	101920	+		3870	22233	2559	2562	4427	4427					0.03330030179745336
CTHRLLLLGRK	11	Unmodified	_CTHRLLLLGRK_					0	0	0		chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS;nc|ENSG00000087460|Q5JWF2-3|GNAS	chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS	chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2678527832031	3	437.267691	1308.78124	-1.5729	-0.00068777	2.064	0.00090252	0.49113	0.00021475	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.77205	1	4175	4175		17.167	0	1	4358700			3871	368	2560	2563	4428	4428					0.13920484735899663
CTHRLLLLGRK	11	Unmodified	_CTHRLLLLGRK_					0	0	0		chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS;nc|ENSG00000087460|Q5JWF2-3|GNAS	chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS	chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2679748535156	3	437.267691	1308.78124	0.29718	0.00012995	0.15623	6.8312E-05	0.4534	0.00019826	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.76892	1	4149	4149		17.833	0.36513	1	4533800			3872	368	2560	2563	4429	4429					0.13920484735899663
CTHRLLLLGRK	11	Unmodified	_CTHRLLLLGRK_					0	0	0		chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS;nc|ENSG00000087460|Q5JWF2-3|GNAS	chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS	chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2676696777344	3	437.267691	1308.78124	0.78044	0.00034126	-0.62366	-0.00027271	0.15677	6.8551E-05	437.26733211231357	49.246	1.5472	50.15	49.725	51.272	0.90424					125	37	5	0	0	0	0.74771	1	4843	4843		22.562	1.7244	1	5667400			3873	368	2560	2563	4430	4430					0.13920484735899663
CTLKISAGLL	10	Unmodified	_CTLKISAGLL_					0	0	0			REV__nc|ENSG00000211672|A0A075B6K6|IGLV4-3	REV__nc|ENSG00000211672|A0A075B6K6|IGLV4-3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8035583496094	2	509.801903	1017.58925	0.66528	0.00033916	2.8054	0.0014302	3.4706	0.0017693	509.80330176373235	84.326	2.5006	84.474	83.057	85.557	0.14794					163	57	4	0	0	0	0.8651	1	8304	8304		25.574	0.12388	1	928020	+		3874	30181	2561	2564	4431	4431					0.08116144265068215
CTNCAFRH	8	Unmodified	_CTNCAFRH_					0	0	0			REV__ENSG00000161980|ENST00000293860|POLR3K	REV__ENSG00000161980|ENST00000293860|POLR3K	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.19586181640625	2	476.199822	950.38509	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.98	1	113.04	112.54	113.54	0.066025								0	0	0	0.30478	1	12141	12141		17.365	1.7232	1		+		3875	20787	2562	2565	4432	4432					-0.09208698377256042
CTPGKAKRKA	10	Unmodified	_CTPGKAKRKA_					0	0	0		ENST00000576764.1_1_17:3807220-3807855:-|nuORF;ENST00000572418.1_1_17:3807220-3819678:-|nuORF;ENSG00000108405|ENST00000225538|P2RX1	ENST00000576764.1_1_17:3807220-3807855:-|nuORF	ENST00000576764.1_1_17:3807220-3807855:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8110961914062	2	530.308218	1058.60188	-1.5162	-0.00080408	-1.2874	-0.00068271	-2.8036	-0.0014868	530.811105038982	98.264	1.7761	98.459	97.177	98.953	0.19585					71	40	3	0	0	0	0.8651	1	10146	10146		25.574	0.12388	1	81500			3876	2404	2563	2566	4433	4433					0.07492600447972109
CTPIKVGVP	9	Unmodified	_CTPIKVGVP_					0	0	0			REV__nc|ENSG00000100591|O95433-2|AHSA1	REV__nc|ENSG00000100591|O95433-2|AHSA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26348876953125	2	457.262413	912.510274	-0.13162	-6.0186E-05	4.3904	0.0020076	4.2588	0.0019474	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.72402	1	7947	7947		38.806	1.647	1	1194000	+		3877	17203	2564	2567	4434	4434					0.05051917030777986
CTPIKVGVP	9	Unmodified	_CTPIKVGVP_					0	0	0			REV__nc|ENSG00000100591|O95433-2|AHSA1	REV__nc|ENSG00000100591|O95433-2|AHSA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26409912109375	2	457.262413	912.510274	0.21557	9.8573E-05	3.9999	0.001829	4.2155	0.0019276	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.64922	1	7990	7990		44.117	3.3386	1	1366100	+		3878	17203	2564	2567	4435	4435					0.05051917030777986
CTPIKVGVP	9	Unmodified	_CTPIKVGVP_					0	0	0			REV__nc|ENSG00000100591|O95433-2|AHSA1	REV__nc|ENSG00000100591|O95433-2|AHSA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.263916015625	2	457.262413	912.510274	0.52869	0.00024175	3.5661	0.0016306	4.0948	0.0018724	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.76255	1	8426	8426		35.618	2.8059	1	4885100	+		3879	17203	2564	2567	4436	4436					0.05051917030777986
CTPLKLVLHAL	11	Unmodified	_CTPLKLVLHAL_					0	0	0			REV__ENST00000267205.6_1_12:122216327-122216612:-|nuORF	REV__ENST00000267205.6_1_12:122216327-122216612:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.36669921875	2	604.365201	1206.71585	2.3603	0.0014265	0.029722	1.7963E-05	2.39	0.0014444	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.70737	1	12733	12733		30.318	0	1	5984800	+		3880	24505	2565	2568	4437	4437					0.12076070490184065
CTPPDTLP	8	Unmodified	_CTPPDTLP_					0	0	0		nc|ENSG00000127124|Q5T1R4-2|HIVEP3;ENSG00000127124|ENST00000372583|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.1990051269531	2	422.199479	842.384405	-0.033932	-1.4326E-05	-1.7909	-0.00075611	-1.8248	-0.00077043	422.19882034448597	84.27	3.1417	84.705	82.967	86.108	0.43538					155	76	3	0	0	0	0.86288	1	9795	9795		26.796	0	1	930850			3881	3484	2566	2569	4438	4438					-0.04309214545298801
CTRMHCQEP	9	Unmodified	_CTRMHCQEP_					0	0	0			REV__nc|ENSG00000147852|P98155-2|VLDLR	REV__nc|ENSG00000147852|P98155-2|VLDLR	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.7213134765625	2	552.722804	1103.43105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.681	1	70.814	70.314	71.314	0.13356								0	0	0	0.31738	1	6415	6415		24.519	0.31644	1		+		3882	20087	2567	2570	4439	4439					-0.1165242125732675
CTRQESGRL	9	Unmodified	_CTRQESGRL_					0	0	0			REV__CON__Q3KUS7	REV__CON__Q3KUS7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.2637329101562	2	525.261465	1048.50838	-0.36547	-0.00019197	-0.89024	-0.00046761	-1.2557	-0.00065958	525.2607851235975	63.929	0.51808	63.956	63.761	64.279	0.027142					30	13	3	0	0	0	0.73802	1	6024	6024		37.812	2.1932	1	113640	+	+	3883	16009	2568	2571	4440	4440					-0.013937437251115625
CTRQESGRL	9	Unmodified	_CTRQESGRL_					0	0	0			REV__CON__Q3KUS7	REV__CON__Q3KUS7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	525.261465	1048.50838	-0.041047	-2.156E-05	-1.3679	-0.00071849	-1.4089	-0.00074005	525.2605650016301	64.241	0.45039	64.241	63.954	64.404	-0.00078583	0.15223	-0.00022675	NaN	37.812	35	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99906	+	+	3884	16009	2568	2571							-0.013937437251115625
CTRQESGRL	9	Unmodified	_CTRQESGRL_					0	0	0			REV__CON__Q3KUS7	REV__CON__Q3KUS7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	525.261465	1048.50838	0.26224	0.00013774	-0.97261	-0.00051088	-0.71038	-0.00037313	525.2603986770199	64.103	0.5937	64.068	63.743	64.337	-0.034256	-0.019925	0.00018849	NaN	37.812	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106340	+	+	3885	16009	2568	2571							-0.013937437251115625
CTRQESGRL	9	Unmodified	_CTRQESGRL_					0	0	0			REV__CON__Q3KUS7	REV__CON__Q3KUS7	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	525.261465	1048.50838	-0.36547	-0.00019197	-0.89024	-0.00046761	-1.2557	-0.00065958	525.2607851235975	63.929	0.51808	63.956	63.761	64.279	0.027142	-0.13231	0.00027502	NaN	37.812	30	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113640	+	+	3886	16009	2568	2571							-0.013937437251115625
CTRRIKAIFG	10	Unmodified	_CTRRIKAIFG_					0	0	0			REV__ENST00000500358.6_1_4:100010048-100010204:+|nuORF	REV__ENST00000500358.6_1_4:100010048-100010204:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.7743530273438	2	582.837143	1163.65973	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.903	1	21.903	21.403	22.403	0								0	0	0	0.45132	1	621	621		29.15	1.2673	1		+		3887	27805	2569	2572	4441	4441					0.08444862373380602
CTTHIFSH	8	Unmodified	_CTTHIFSH_					0	0	0			REV__nc|ENSG00000135100|P20823-6|HNF1A	REV__nc|ENSG00000135100|P20823-6|HNF1A	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.30609130859375	2	473.215995	944.417436	-1.6313	-0.00077195	-1.8301	-0.00086602	-3.4613	-0.001638	473.21495281216806	50.086	0.45309	50.086	49.883	50.336	0					15	10	2	0	0	0	0.4196	1	3984	3984		25.45	8.977	1	45388	+		3888	29861	2570	2573	4442	4442					-0.05699587702599729
CTTLIPTK	8	Unmodified	_CTTLIPTK_					0	0	0		nc|ENSG00000171502|Q17RW2-2|COL24A1;ENSG00000171502|ENST00000370571|COL24A1	nc|ENSG00000171502|Q17RW2-2|COL24A1	nc|ENSG00000171502|Q17RW2-2|COL24A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.25927734375	2	438.746596	875.478639	-1.3099	-0.0005747	3.7466	0.0016438	2.4368	0.0010691	438.7478623934869	40.998	0.49154	41.632	41.461	41.952	0.6339					20	13	2	0	0	0	0.4196	1	3577	3577		37.159	0	1	529930			3889	6675	2571	2574	4443	4443					0.035919242768159165
CTTPCQPIQ	9	Unmodified	_CTTPCQPIQ_					0	0	0			REV__nc|ENSG00000042832|P01266-2|TG	REV__nc|ENSG00000042832|P01266-2|TG	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	495.7122802734375	2	495.722795	989.431037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.219	1	70.354	69.854	70.854	0.13506								0	0	0	0.31117	1	6365	6365		26.693	1.2427	1		+		3890	16331	2572	2575	4444	4444					-0.06410097985667562
CTVCDKAFVRN	11	Unmodified	_CTVCDKAFVRN_					0	0	0		nc|ENSG00000198482|Q8N4W9-2|ZNF808;ENSG00000198482|ENST00000359798|ZNF808;nc|ENSG00000189190|Q6ZNG1|ZNF600;ENSG00000189190|ENST00000692063|ZNF600	nc|ENSG00000198482|Q8N4W9-2|ZNF808	nc|ENSG00000198482|Q8N4W9-2|ZNF808	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	628.2976684570312	2	628.299733	1254.58491	-0.78884	-0.00049563	3.147	0.0019773	2.3582	0.0014817	628.3015459313211	60.618	0.66589	60.649	60.311	60.977	0.0312					43	19	3	0	0	0	0.39037	1	5646	5646		60.118	7.1816	1	370500			3891	8276	2573	2576	4445	4445					-0.03219688220133321
CTVIKRQKQS	10	Carbamidomethyl (C)	_C(Carbamidomethyl (C))TVIKRQKQS_	C(1)TVIKRQKQS		C(53)TVIKRQKQS		0	1	0		nc|ENSG00000107937|Q9BZE4-3|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;ENSG00000107937|ENST00000360803|GTPBP4;ENST00000491635.1_1_10:1042067-1042223:+|nuORF	nc|ENSG00000107937|Q9BZE4-3|GTPBP4	nc|ENSG00000107937|Q9BZE4-3|GTPBP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.56451416015625	3	416.567806	1246.68159	-1.5524	-0.00064669	-3.0983	-0.0012906	-4.6507	-0.0019373	416.5663766323255	43.632	0.72833	44.406	44.064	44.792	0.7738					38	17	3	0	0	0	0.5442	1	3974	3974		53.089	15.489	1	2032400			3892	2380	2574	2577	4446	4446	28				0.0681162233129271
CTVTAASTTLL	11	Unmodified	_CTVTAASTTLL_					0	0	0			REV__ENST00000368357.7_1_6:126102451-126102514:+|nuORF	REV__ENST00000368357.7_1_6:126102451-126102514:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.7824096679688	2	540.783907	1079.55326	-0.075341	-4.0743E-05	-2.1469	-0.001161	-2.2222	-0.0012017	540.7828052730213	57.817	1.1383	58.371	58.076	59.215	0.55323					39	27	2	0	0	0	0.48529	1	6088	6088		52.937	0	1	317830	+		3893	25593	2575	2578	4447	4447					0.016666422975504247
CTVTAASTTLL	11	Unmodified	_CTVTAASTTLL_					0	0	0			REV__ENST00000368357.7_1_6:126102451-126102514:+|nuORF	REV__ENST00000368357.7_1_6:126102451-126102514:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	540.783907	1079.55326	-1.5179	-0.00082084	-0.43012	-0.0002326	-1.948	-0.0010534	540.7835763653392	58.123	0.81571	58.517	58.043	58.859	0.39407	0.073441	0.00098663	NaN	52.937	35	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	439060	+		3894	25593	2575	2578							0.016666422975504247
CTWTDQGR	8	Unmodified	_CTWTDQGR_					0	0	0		ENST00000493772.5_1_20:62372609-62373703:+|nuORF	ENST00000493772.5_1_20:62372609-62373703:+|nuORF	ENST00000493772.5_1_20:62372609-62373703:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.27886962890625	2	483.708534	965.402514	1.5648	0.00075693	1.8499	0.00089479	3.4147	0.0016517	483.70963071856266	95.035	1.1367	95.467	95.069	96.206	0.4324					55	27	3	0	0	0	0.4196	1	11330	11330		24.203	3.7209	1	310000			3895	12738	2576	2579	4448	4448					-0.08157079570582937
CVCECMKSF	9	3 Carbamidomethyl (C),Oxidation (M)	_C(Carbamidomethyl (C))VC(Carbamidomethyl (C))EC(Carbamidomethyl (C))M(Oxidation (M))KSF_	C(1)VC(1)EC(1)MKSF	CVCECM(1)KSF	C(48)VC(48)EC(48)MKSF	CVCECM(48)KSF	0	3	1		ENST00000396137.4_1_5:78621635-78621827:+|nuORF	ENST00000396137.4_1_5:78621635-78621827:+|nuORF	ENST00000396137.4_1_5:78621635-78621827:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.7328491210938	2	618.729437	1235.44432	-0.32244	-0.0001995	2.9019	0.0017955	2.5795	0.001596	618.7313321355182	79.434	0.58856	79.493	79.172	79.76	0.059349					26	17	2	0	0	0	0.58668	1	7747	7747		47.657	16.128	1	93937			3896	11111	2577	2580	4449	4449	140;141;142	181			-0.1639835126024991
CVDQRRNRDPR	11	Unmodified	_CVDQRRNRDPR_					0	0	0		chr11:1929828-1933721|21|19.33|0.57|5.09|+|2|TNNT3,TNNT3|1	chr11:1929828-1933721|21|19.33|0.57|5.09|+|2|TNNT3,TNNT3|1	chr11:1929828-1933721|21|19.33|0.57|5.09|+|2|TNNT3,TNNT3|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2393798828125	3	472.240864	1413.70076	-0.41686	-0.00019686	-2.8505	-0.0013461	-3.2674	-0.001543	472.2394384657612	26.966	1.1189	26.938	26.104	27.223	-0.027706					44	26	3	0	0	0	0.71803	1	1201	1201		28.577	5.1988	1	132230			3897	98	2578	2581	4450	4450					0.010459716748982828
CVEEDNIVNYA	11	Unmodified	_CVEEDNIVNYA_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.7777709960938	2	634.77681	1267.53907	0.47901	0.00030407	0.3805	0.00024153	0.85951	0.0005456	634.7769229054138	50.349	0.97601	50.394	49.77	50.746	0.044327					46	28	2	0	0	0	0.70737	1	3947	3947		30.318	0	1	173620			3898	1239	2579	2582	4451	4451					-0.0840005492138971
CVFPKEGRHR	10	Unmodified	_CVFPKEGRHR_					0	0	0			REV__ENSG00000198081|ENST00000651870|ZBTB14	REV__ENSG00000198081|ENST00000651870|ZBTB14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	410.2181701660156	3	410.217108	1227.62949	-0.40522	-0.00016623	3.9606	0.0016247	3.5554	0.0014585	410.21866762821935	16.847	0.32242	16.768	16.659	16.982	-0.079054					24	10	3	0	0	0	0.5442	1	160	160		53.089	5.1294	1	167510	+		3899	23296	2580	2583	4452	4452					0.02478503708198332
CVGLSPHGLLS	11	Unmodified	_CVGLSPHGLLS_					0	0	0			REV__ENST00000567436.1_1_16:30204298-30204508:-|nuORF	REV__ENST00000567436.1_1_16:30204298-30204508:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.281494140625	2	541.786784	1081.55902	-0.57437	-0.00031119	-1.3653	-0.00073971	-1.9397	-0.0010509	541.7849051157797	59.956	0.37338	59.989	59.728	60.102	0.032822					12	9	2	0	0	0	0.17387	1	5572	5572		30.318	0	1	43713	+		3900	28878	2581	2584	4453	4453					0.02149785599885945
CVHGAAELH	9	Unmodified	_CVHGAAELH_					0	0	0			REV__nc|ENSG00000151948|Q96MS3-3|GLT1D1	REV__nc|ENSG00000151948|Q96MS3-3|GLT1D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7231750488281	2	468.721444	935.428335	-0.013184	-6.1798E-06	3.638	0.0017052	3.6249	0.001699	468.7232380662735	77.148	2.5429	77.547	77.268	79.811	0.3997					145	61	5	0	0	0	0.5393	2	8768	8768;8804		50.025	11.218	1	15095000	+		3901	20279	2582	2585	4454;4455	4454					-0.041961853283282835
CVHVRRLRLS	10	Unmodified	_CVHVRRLRLS_					0	0	0			REV__ENSG00000116176|ENST00000234798|TPSG1	REV__ENSG00000116176|ENST00000234798|TPSG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8695068359375	2	619.866766	1237.71898	0.62564	0.00038782	3.7113	0.0023005	4.337	0.0026884	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.8651	1	10265	10265		25.574	1.0549	1	4779100	+		3902	18185	2583	2586	4456	4456					0.10962758387586291
CVISKVLTF	9	Unmodified	_CVISKVLTF_					0	0	0		ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	505.2938537597656	2	505.291171	1008.56779	-0.058143	-2.9379E-05	0.7286	0.00036815	0.67046	0.00033878	505.291445253125	97.476	2.5316	97.533	97.032	99.564	0.056831					136	58	3	0	0	0	0.69624	1	10369	10369		40.778	0.20554	1	1323100			3903	1276	2584	2587	4457	4457					0.06384759236345872
CVKKKKKKT	9	Unmodified	_CVKKKKKKT_					0	0	0		nc|ENSG00000163814|Q9H5V8-2|CDCP1;ENSG00000163814|ENST00000296129|CDCP1	nc|ENSG00000163814|Q9H5V8-2|CDCP1	nc|ENSG00000163814|Q9H5V8-2|CDCP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.316650390625	2	545.860086	1089.70562	-1.4657	-0.00080006	-1.6165	-0.00088238	-3.0822	-0.0016824	545.8575090701786	89.915	0.1732	90.091	89.956	90.129	0.17579					6	3	2	0	0	0	0.20789	1	8937	8937		7.1934	4.2639	1	23168			3904	5869	2585	2588	4458	4458					0.1643550755563865
CVKLGTELPP	10	Unmodified	_CVKLGTELPP_					0	0	0			REV__ENSG00000181544|ENST00000650831|FANCB	REV__ENSG00000181544|ENST00000650831|FANCB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.7926025390625	2	528.791535	1055.56852	0.035781	1.8921E-05	3.428	0.0018127	3.4637	0.0018316	528.79326255139	36.295	1.3449	36.276	35.876	37.221	-0.018673					75	29	5	0	0	0	0.71042	1	2365	2365		44.117	5.3107	1	1122800	+		3905	22465	2586	2589	4459	4459					0.04295553885390291
CVKRLAPTVF	10	Unmodified	_CVKRLAPTVF_					0	0	0			REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.329833984375	2	567.328619	1132.64269	1.8589	0.0010546	0.20517	0.0001164	2.0641	0.001171	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.80179	1	10008	10008		39.253	11.371	1	15439000	+		3906	20219	2587	2590	4460	4460					0.08166941767581193
CVKRLAPTVF	10	Unmodified	_CVKRLAPTVF_					0	0	0			REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3351440429688	2	567.328619	1132.64269	0.85539	0.00048528	2.0596	0.0011684	2.9149	0.0016537	567.3298267796688	98.987	3.1921	99.144	98.232	101.42	0.15659					95	74	2	0	0	0	0.8651	1	10235	10235		25.574	2.9944	1	135500	+		3907	20219	2587	2590	4461	4461					0.08166941767581193
CVKRLAPTVF	10	Unmodified	_CVKRLAPTVF_					0	0	0			REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.329345703125	2	567.328619	1132.64269	1.3743	0.0007797	1.0283	0.00058341	2.4027	0.0013631	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.82886	1	11184	11184		37.812	2.1932	1	6182600	+		3908	20219	2587	2590	4462	4462					0.08166941767581193
CVKRLAPTVF	10	Unmodified	_CVKRLAPTVF_					0	0	0			REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	567.328619	1132.64269	-0.41381	-0.00023477	3.0423	0.001726	2.6285	0.0014912	567.3303626251034	99.59	0.77114	99.59	99.348	100.12	0	0.2486	-0.00031919	NaN	25.574	25	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66129	+		3909	20219	2587	2590							0.08166941767581193
CVKRLAPTVF	10	Unmodified	_CVKRLAPTVF_					0	0	0			REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	567.328619	1132.64269	-1.2039	-0.000683	3.4679	0.0019674	2.264	0.0012844	567.3304966006361	99.325	1.1711	99.374	98.928	100.1	0.04982	0.032696	0.00016369	NaN	25.574	43	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119210	+		3910	20219	2587	2590							0.08166941767581193
CVKRLAPTVF	10	Unmodified	_CVKRLAPTVF_					0	0	0			REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	567.328619	1132.64269	0.85539	0.00048528	2.0596	0.0011684	2.9149	0.0016537	567.3298267796688	98.987	3.1921	99.144	98.232	101.42	0.15659	-0.198	-0.0014343	NaN	25.574	95	74	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135500	+		3911	20219	2587	2590							0.08166941767581193
CVKRLAPTVF	10	Unmodified	_CVKRLAPTVF_					0	0	0			REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	REV__ENST00000510052.5_1_5:10227736-10249985:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	567.328619	1132.64269	-1.3958	-0.00079188	4.1385	0.0023479	2.7427	0.001556	567.3309230931134	99.073	1.5755	99.258	98.367	99.942	0.18582	-0.08329	0.0009246	NaN	25.574	60	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104820	+		3912	20219	2587	2590							0.08166941767581193
CVKWADWDKT	10	Unmodified	_CVKWADWDKT_					0	0	0			REV__ENSG00000065154|ENST00000368845|OAT	REV__ENSG00000065154|ENST00000368845|OAT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.24957275390625	3	417.865741	1250.57539	2.0696	0.0008648	3.7515	0.0015676	5.821	0.0024324	417.8671962932603	45.706	0.42941	45.702	45.49	45.92	-0.0041618					15	9	2	0	0	0	0.37624	1	3651	3651		24.232	3.3947	1	78630	+		3913	16493	2588	2591	4463	4463					-0.03987133234045359
CVKWADWDKT	10	Unmodified	_CVKWADWDKT_					0	0	0			REV__ENSG00000065154|ENST00000368845|OAT	REV__ENSG00000065154|ENST00000368845|OAT	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	417.865741	1250.57539	-0.96653	-0.00040388	6.3569	0.0026563	5.3903	0.0022524	417.868218592675	45.677	0.68546	45.646	45.365	46.05	-0.031067	-0.027998	0.0024945	NaN	24.232	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139600	+		3914	16493	2588	2591							-0.03987133234045359
CVLGIAAIIVS	11	Unmodified	_CVLGIAAIIVS_					0	0	0		ENSG00000006831|ENST00000357103|ADIPOR2	ENSG00000006831|ENST00000357103|ADIPOR2	ENSG00000006831|ENST00000357103|ADIPOR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.78955078125	2	529.817553	1057.62055	-1.769	-0.00093726	-0.57172	-0.00030291	-2.3407	-0.0012402	529.8171495449227	42.797	0.29109	43.495	43.381	43.672	0.69754					9	6	2	0	0	0	0.17404	1	3835	3835		35.618	6.4687	1	119260			3915	715	2589	2592	4464	4464					0.0940471729913952
CVLGVRLL	8	Unmodified	_CVLGVRLL_					0	0	0			REV__ENST00000465154.1_1_9:130272232-130272589:-|nuORF	REV__ENST00000465154.1_1_9:130272232-130272589:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7740783691406	2	436.772948	871.531344	0.39754	0.00017364	0.64314	0.00028091	1.0407	0.00045454	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.86791	1	1220	1220		28.254	1.4582	1	81327	+		3916	27106	2590	2593	4465	4465					0.0904392713028983
CVLTAIHL	8	Unmodified	_CVLTAIHL_					0	0	0		ENSG00000168621|ENST00000326524|GDNF;nc|ENSG00000168621|P39905-3|GDNF;nc|ENSG00000168621|P39905-5|GDNF;nc|ENSG00000168621|P39905-2|GDNF;nc|ENSG00000168621|P39905-4|GDNF	ENSG00000168621|ENST00000326524|GDNF	ENSG00000168621|ENST00000326524|GDNF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2513732910156	2	435.249306	868.484059	1.6099	0.00070073	2.9528	0.0012852	4.5628	0.001986	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87276	1	7947	7947		29.842	0.69198	1	3370400			3917	6420	2591	2594	4466	4466					0.04455647859299461
CVLVKSAVF	9	Unmodified	_CVLVKSAVF_					0	0	0		ENST00000493713.1_1_2:165549153-165551207:-|nuORF	ENST00000493713.1_1_2:165549153-165551207:-|nuORF	ENST00000493713.1_1_2:165549153-165551207:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.2785339355469	2	483.278063	964.541574	-0.69726	-0.00033697	2.2408	0.0010829	1.5435	0.00074595	483.2791425455724	95.175	1.9923	95.222	94.662	96.654	0.046982					116	46	3	0	0	0	0.7932	1	10117	10117		25.45	1.2474	1	1260700			3918	12736	2592	2595	4467	4467					0.057884900648673465
CVMQFCLH	8	Unmodified	_CVMQFCLH_					0	0	0			REV__ENST00000599145.1_1_19:58928156-58928222:+|nuORF	REV__ENST00000599145.1_1_19:58928156-58928222:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.7138671875	2	490.711176	979.407799	0.46701	0.00022917	4.1151	0.0020193	4.5821	0.0022485	490.7133417262937	95.947	1.8864	96.351	95.769	97.655	0.40451					153	45	6	0	0	0	0.89457	1	11506	11506		37.028	1.4102	1	6523800	+		3919	29291	2593	2596	4468	4468					-0.08272815303985226
CVPGALQWL	9	Unmodified	_CVPGALQWL_					0	0	0		ENST00000341418.9_1_15:68114320-68117168:+|nuORF	ENST00000341418.9_1_15:68114320-68117168:+|nuORF	ENST00000341418.9_1_15:68114320-68117168:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.7563781738281	2	493.760038	985.505523	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.126	1	60.517	60.017	61.017	0.39077								0	0	0	0.35186	1	6365	6365		47.916	0.25827	1				3920	10247	2594	2597	4469	4469					0.012190328880137713
CVQIANPILR	10	Unmodified	_CVQIANPILR_					0	0	0			REV__ENSG00000023171|ENST00000635736|GRAMD1B	REV__ENSG00000023171|ENST00000635736|GRAMD1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.8995971679688	2	563.823701	1125.63285	0.2288	0.000129	-0.65567	-0.00036968	-0.42687	-0.00024068	564.3251440134649	30.246	0.46784	30.359	30.05	30.518	0.11225					26	22	2	0	0	0	0.37624	1	1344	1344		26.693	0	1	90984	+		3921	16246	2595	2598	4470	4470					0.0750575376218876
CVQNILKL	8	Unmodified	_CVQNILKL_					0	0	0		nc|ENSG00000172175|Q9UDY8-2|MALT1;ENSG00000172175|ENST00000649217|MALT1	nc|ENSG00000172175|Q9UDY8-2|MALT1	nc|ENSG00000172175|Q9UDY8-2|MALT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7769775390625	2	465.775688	929.536823	0.5788	0.00026959	3.5248	0.0016418	4.1036	0.0019114	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.85277	1	7637	7637		25.45	1.2474	1	344270			3922	6749	2596	2599	4471	4471					0.06923605922111165
CVQRSRGFL	9	Unmodified	_CVQRSRGFL_					0	0	0			REV__ENST00000261758.5_1_15:81271719-81271764:-|nuORF	REV__ENST00000261758.5_1_15:81271719-81271764:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.2849731445312	2	533.284743	1064.55493	1.3498	0.00071983	-1.666	-0.00088844	-0.31617	-0.00016861	533.2836426407571	90.388	0.81444	90.839	90.528	91.342	0.45058					42	19	3	0	0	0	0.51307	1	10701	10701		51.335	1.8939	1	920780	+		3923	24403	2597	2600	4472	4472					0.025237408968223463
CVRKVPEA	8	Unmodified	_CVRKVPEA_					0	0	0		ENST00000480658.5_1_7:45067303-45109452:+|nuORF	ENST00000480658.5_1_7:45067303-45109452:+|nuORF	ENST00000480658.5_1_7:45067303-45109452:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.2491760253906	2	451.249837	900.485122	-0.97999	-0.00044222	-1.1427	-0.00051564	-2.1227	-0.00095786	451.24921015554173	65.724	1.4568	65.769	65.089	66.546	0.045113					104	74	2	0	0	0	0.86288	1	5789	5789		26.796	1.3459	1	906430			3924	12446	2598	2601	4473	4473					0.0308986222820522
CVRLRKHRQ	9	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VRLRKHRQ_	C(1)VRLRKHRQ		C(46)VRLRKHRQ		0	1	0		L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|165|3|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|165|3|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|165|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2421875	3	418.243769	1251.70948	0.34366	0.00014373	-4.0456	-0.001692	-3.7019	-0.0015483	418.24199984171395	17.362	0.69825	16.752	16.305	17.003	-0.6107					35	15	4	0	0	0	0.6204	1	250	250		45.972	7.2186	1	327120			3925	14549	2599	2602	4474	4474	192				0.09368990102029784
CVRWPSLLA	9	Carbamidomethyl (C)	_C(Carbamidomethyl (C))VRWPSLLA_	C(1)VRWPSLLA		C(44)VRWPSLLA		0	1	0		ENSG00000162396|ENST00000371279|PARS2	ENSG00000162396|ENST00000371279|PARS2	ENSG00000162396|ENST00000371279|PARS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	551.2975463867188	2	551.297319	1100.58008	-1.4835	-0.00081786	3.7105	0.0020456	2.227	0.0012277	551.299268794571	32.001	0.65455	32.001	31.801	32.456	0					57	24	3	0	0	0	0.64922	1	1556	1556		44.117	6.3053	1	214540			3926	5683	2600	2603	4475	4475	71				0.033817956993971166
CVSVPPCVY	9	Carbamidomethyl (C)	_CVSVPPC(Carbamidomethyl (C))VY_	C(0.001)VSVPPC(0.999)VY		C(-33)VSVPPC(33)VY		0	1	0			REV__ENST00000475306.1_1_1:24410803-24434643:-|nuORF	REV__ENST00000475306.1_1_1:24410803-24434643:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2345581054688	2	512.235538	1022.45652	-0.047414	-2.4287E-05	-1.0544	-0.00054008	-1.1018	-0.00056436	512.2348746592111	58.375	1.001	58.361	57.946	58.947	-0.013641					89	34	4	0	0	0	0.49378	1	5329	5329		52.299	6.3269	2	1104700	+		3927	27316	2601	2604	4476	4476	332				-0.053806234632475025
CVVKRVFPI	9	Unmodified	_CVVKRVFPI_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8207397460938	2	530.82043	1059.62631	-0.88248	-0.00046844	2.1749	0.0011545	1.2924	0.00068604	530.821384723199	80.761	1.5978	80.761	80.141	81.738	0					159	57	4	0	0	0	0.76996	1	7452	7452		33.516	9.3128	1	2196600	+		3928	17368	2602	2605	4477	4477					0.09887860601497778
CVVKRVFPI	9	Unmodified	_CVVKRVFPI_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.8207397460938	2	530.82043	1059.62631	0.86442	0.00045885	0.023028	1.2224E-05	0.88744	0.00047107	530.8204450676391	80.434	1.3535	80.374	79.998	81.352	-0.059692					100	39	4	0	0	0	0.76402	1	8068	8068		35.201	4.6971	1	626610	+		3929	17368	2602	2605	4478	4478					0.09887860601497778
CVVKRVFPI	9	Unmodified	_CVVKRVFPI_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.82080078125	2	530.82043	1059.62631	0.64608	0.00034295	0.13277	7.0476E-05	0.77885	0.00041343	530.820506018963	80.205	1.3856	80.261	79.781	81.166	0.055916					85	34	3	0	0	0	0.76996	1	7942	7942		33.516	3.674	1	627060	+		3930	17368	2602	2605	4479	4479					0.09887860601497778
CVVKRVFPI	9	Unmodified	_CVVKRVFPI_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8204345703125	2	530.82043	1059.62631	0.64668	0.00034327	0.28761	0.00015267	0.93429	0.00049594	530.8205589668217	80.04	1.1775	80.181	79.815	80.992	0.14118					115	43	3	0	0	0	0.7932	5	7587	7587;7595;7603;7646;7685		26.796	3.7536	1	892800	+		3931	17368	2602	2605	4480;4481;4482;4483;4484	4480					0.09887860601497778
CVVKRVFPI	9	Unmodified	_CVVKRVFPI_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8209838867188	2	530.82043	1059.62631	0.66638	0.00035373	0.38734	0.00020561	1.0537	0.00055934	530.8204640085535	82.305	1.3281	82.45	81.982	83.31	0.14551					83	30	4	0	0	0	0.77546	1	7886	7886		31.955	8.9124	1	1921600	+		3932	17368	2602	2605	4485	4485					0.09887860601497778
CVVKRVFPI	9	Unmodified	_CVVKRVFPI_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.821044921875	2	530.82043	1059.62631	0.37544	0.00019929	0.98153	0.00052102	1.357	0.00072031	530.8207758612427	79.518	0.93618	79.934	79.317	80.253	0.41621					53	21	3	0	0	0	0.76996	1	9058	9058		33.516	3.674	1	1028200	+		3933	17368	2602	2605	4486	4486					0.09887860601497778
CVVKRVFPI	9	Unmodified	_CVVKRVFPI_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8214111328125	2	530.82043	1059.62631	0.17632	9.3593E-05	0.90859	0.0004823	1.0849	0.00057589	530.8207586851681	81.706	1.2049	82.133	81.753	82.958	0.42646					68	29	3	0	0	0	0.78058	1	9405	9405		30.504	5.9844	1	1750400	+		3934	17368	2602	2605	4487	4487					0.09887860601497778
CVVKRVFPI	9	Unmodified	_CVVKRVFPI_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8206787109375	2	530.82043	1059.62631	-0.047896	-2.5424E-05	1.3406	0.00071161	1.2927	0.00068619	530.8209770202351	79.275	0.97966	79.825	79.318	80.298	0.54945					57	22	3	0	0	0	0.5393	1	9080	9080		50.025	11.003	1	876930	+		3935	17368	2602	2605	4488	4488					0.09887860601497778
CVVKRVFPI	9	Unmodified	_CVVKRVFPI_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8204956054688	2	530.82043	1059.62631	0.050778	2.6954E-05	1.0607	0.00056306	1.1115	0.00059002	530.8208672887664	81.729	0.99429	82.229	81.744	82.738	0.49966					64	24	3	0	0	0	0.7932	1	9427	9427		24.203	1.6231	1	2056300	+		3936	17368	2602	2605	4489	4489					0.09887860601497778
CVVKRVFPI	9	Unmodified	_CVVKRVFPI_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	530.82043	1059.62631	0.17632	9.3593E-05	0.90859	0.0004823	1.0849	0.00057589	530.8207586851681	81.706	1.2049	82.133	81.753	82.958	0.42646	-0.048007	-8.1395E-05	NaN	30.504	68	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1750400	+		3937	17368	2602	2605							0.09887860601497778
CVVKRVFPI	9	Unmodified	_CVVKRVFPI_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	530.82043	1059.62631	0.050778	2.6954E-05	1.0607	0.00056306	1.1115	0.00059002	530.8208672887664	81.729	0.99429	82.229	81.744	82.738	0.49966	0.048007	8.0133E-05	NaN	30.504	64	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2056300	+		3938	17368	2602	2605							0.09887860601497778
CWAWLPRRR	9	Unmodified	_CWAWLPRRR_					0	0	0		ENSG00000261794|ENST00000566740|GOLGA8H;nc|ENSG00000215252|A8MQT2-2|GOLGA8B;ENSG00000215252|ENST00000683415|GOLGA8B;ENSG00000175265|ENST00000359187|GOLGA8A;nc|ENSG00000175265|A7E2F4|GOLGA8A;ENSG00000188626|ENST00000563027|GOLGA8M;ENSG00000179938|ENST00000567927|GOLGA8J;ENSG00000186399|ENST00000327271|GOLGA8R;ENSG00000232653|ENST00000448387|GOLGA8N;ENSG00000206127|ENST00000509311|GOLGA8O;ENSG00000178115|ENST00000562783|GOLGA8Q;ENSG00000249931|ENST00000512626|GOLGA8K;ENSG00000261247|ENST00000569052|GOLGA8T;ENSG00000261739|ENST00000562295|GOLGA8S;nc|ENSG00000290359|Q0D2H9|GOLGA8DP;nc|ENSG00000291004|A6NC78|GOLGA8IP;ENSG00000153684|ENST00000526619|GOLGA8F;ENSG00000183629|ENST00000525590|GOLGA8G	ENSG00000261794|ENST00000566740|GOLGA8H;ENSG00000186399|ENST00000327271|GOLGA8R;ENSG00000249931|ENST00000512626|GOLGA8K;ENSG00000261739|ENST00000562295|GOLGA8S	ENSG00000261739|ENST00000562295|GOLGA8S	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3358154296875	2	622.335101	1242.65565	-0.27733	-0.0001726	2.2373	0.0013923	1.9599	0.0012197	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.77244	1	12156	12156		18.324	0	1	419280			3939	8928;8929;7185;8841	2603	2606	4490	4490					0.04402817670325021
CWGHPGVARA	10	Unmodified	_CWGHPGVARA_					0	0	0		ENST00000359491.1_1_14:64804910-64805033:-|nuORF	ENST00000359491.1_1_14:64804910-64805033:-|nuORF	ENST00000359491.1_1_14:64804910-64805033:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.2556762695312	2	527.255985	1052.49742	0.66214	0.00034912	1.7208	0.00090731	2.383	0.0012564	527.2567706615374	25.253	0.8396	25.303	24.898	25.737	0.050451					79	32	4	0	0	0	0.86482	1	1016	1016		25.45	4.5032	1	313920			3940	10427	2604	2607	4491	4491					-0.026731013087555766
CWHCPFSGNVC	11	Unmodified	_CWHCPFSGNVC_					0	0	0			REV__ENSG00000114554|ENST00000393409|PLXNA1	REV__ENSG00000114554|ENST00000393409|PLXNA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.7373046875	2	626.738454	1251.46235	0.50069	0.0003138	1.2248	0.00076763	1.7255	0.0010814	626.7391438458341	29.852	0.6804	29.837	29.601	30.281	-0.015167					20	15	2	0	0	0	0.7342	1	1534	1534		25.574	2.0514	1	31520	+		3941	18055	2605	2608	4492	4492					-0.15331848223195266
CWHCPFSGNVC	11	Unmodified	_CWHCPFSGNVC_					0	0	0			REV__ENSG00000114554|ENST00000393409|PLXNA1	REV__ENSG00000114554|ENST00000393409|PLXNA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	626.738454	1251.46235	-0.15202	-9.5275E-05	1.7653	0.0011064	1.6132	0.0010111	626.7393989590494	29.892	0.50702	29.849	29.555	30.062	-0.043095	0.0060979	0.00045315	NaN	25.574	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47687	+		3942	18055	2605	2608							-0.15331848223195266
CWHCPFSGNVC	11	Unmodified	_CWHCPFSGNVC_					0	0	0			REV__ENSG00000114554|ENST00000393409|PLXNA1	REV__ENSG00000114554|ENST00000393409|PLXNA1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	626.738454	1251.46235	0.50069	0.0003138	1.2248	0.00076763	1.7255	0.0010814	626.7391438458341	29.852	0.6804	29.837	29.601	30.281	-0.015167	-0.0060979	-0.0002243	NaN	25.574	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31520	+		3943	18055	2605	2608							-0.15331848223195266
CWKEKEEDL	9	Unmodified	_CWKEKEEDL_					0	0	0		chr16:29900885-29901552|32|11.38|0.36|4.96|+|2|None,ASPHD1|1	chr16:29900885-29901552|32|11.38|0.36|4.96|+|2|None,ASPHD1|1	chr16:29900885-29901552|32|11.38|0.36|4.96|+|2|None,ASPHD1|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.30908203125	2	590.271164	1178.52777	0.3176	0.00018747	-2.7383	-0.0016163	-2.4207	-0.0014289	590.2695242278786	32.438	0.6156	32.383	32.104	32.72	-0.054337					17	13	2	0	0	0	0.20789	1	1919	1919		26.693	4.1133	1	33043			3944	206	2606	2609	4493	4493					-0.054348322248642944
CWLASRAP	8	Unmodified	_CWLASRAP_					0	0	0			REV__ENSG00000141699|ENST00000309428|RETREG3	REV__ENSG00000141699|ENST00000309428|RETREG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2284240722656	2	452.228905	902.443257	1.1697	0.00052896	-3.091	-0.0013978	-1.9213	-0.00086888	452.22766943283847	107.06	0.98818	107.17	106.77	107.76	0.10396					98	37	5	0	0	0	0.8347	1	13086	13086		23.042	2.5607	1	2682300	+		3945	19707	2607	2610	4494	4494					-0.011866934603290247
CWMRSCSC	8	Unmodified	_CWMRSCSC_					0	0	0		chr20:58993112-58993482|16|17.06|0.63|4.77|+|1|NELFCD,None|1	chr20:58993112-58993482|16|17.06|0.63|4.77|+|1|NELFCD,None|1	chr20:58993112-58993482|16|17.06|0.63|4.77|+|1|NELFCD,None|1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.205078125	2	488.168818	974.323084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.662	1	65.048	64.548	65.548	0.38615								0	0	0	0.30673	1	6994	6994		15.642	0.0055962	1				3946	369	2608	2611	4495	4495					-0.16510509112254113
CWQPSGTSFRP	11	Unmodified	_CWQPSGTSFRP_					0	0	0		ENST00000215570.7_1_19:2426444-2426798:-|nuORF	ENST00000215570.7_1_19:2426444-2426798:-|nuORF	ENST00000215570.7_1_19:2426444-2426798:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.2908325195312	2	633.290222	1264.56589	1.3491	0.00085435	0.77066	0.00048805	2.1197	0.0013424	633.2906545663215	33.595	0.45135	33.641	33.438	33.889	0.045849					27	17	2	0	0	0	0.73621	1	1637	1637		25.126	0.92324	1	153290			3947	9114	2609	2612	4496	4496					-0.05580901519533654
CYALLYPC	8	Unmodified	_CYALLYPC_					0	0	0		ENSG00000151117|ENST00000280734|TMEM86A	ENSG00000151117|ENST00000280734|TMEM86A	ENSG00000151117|ENST00000280734|TMEM86A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.2148132324219	2	473.214075	944.413596	-0.50602	-0.00023946	0.55471	0.00026249	0.048681	2.3037E-05	473.2139753868401	48.782	0.47343	49.242	48.985	49.459	0.45983					25	11	3	0	0	0	0.88393	1	4724	4724		33.493	2.9893	1	511780			3948	5095	2610	2613	4497	4497					-0.06083393520680147
CYALLYPC	8	Unmodified	_CYALLYPC_					0	0	0		ENSG00000151117|ENST00000280734|TMEM86A	ENSG00000151117|ENST00000280734|TMEM86A	ENSG00000151117|ENST00000280734|TMEM86A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	473.214075	944.413596	-0.78015	-0.00036918	0.60457	0.00028609	-0.17559	-8.309E-05	473.2139355915717	48.567	0.51531	49.471	49.21	49.725	0.90424	0.11476	2.3582E-05	NaN	33.493	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	511680			3949	5095	2610	2613							-0.06083393520680147
CYALTGAKW	9	Unmodified	_CYALTGAKW_					0	0	0			REV__ENST00000524249.5_1_2:46769237-46769306:-|nuORF	REV__ENST00000524249.5_1_2:46769237-46769306:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.75286865234375	2	506.74967	1011.48479	2.3756	0.0012038	3.8853	0.0019689	6.2609	0.0031727	506.7515182161224	98.592	3.0666	98.969	97.268	100.33	0.37679					111	75	2	0	0	0	0.76996	1	11904	11904		33.516	1.5607	1	6133500	+		3950	28158	2611	2614	4498	4498					-0.02049557491648102
CYCGKRISS	9	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))YC(Carbamidomethyl (C))GKRISS_	C(1)YC(1)GKRISS		C(44)YC(44)GKRISS		0	2	0		ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	565.7572631835938	2	565.757701	1129.50085	-1.0965	-0.00062034	-1.8258	-0.001033	-2.9223	-0.0016533	565.7563701882639	53.395	0.43136	53.395	53.218	53.649	0					23	14	2	0	0	0	0.64922	1	4431	4431		44.117	8.4985	1	81304			3951	5659	2612	2615	4499	4499	68;69				-0.058722193170524406
CYCGKRISS	9	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))YC(Carbamidomethyl (C))GKRISS_					0	2	0		ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	565.757701	1129.50085	-0.45049	-0.00025487	-2.467	-0.0013958	-2.9175	-0.0016506	565.7562027575168	53.185	0.48589	53.16	52.947	53.433	-0.024754	-0.15245	0.00063283	NaN	44.117	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80461			3952	5659	2612	2615			68;69				-0.058722193170524406
CYCGKRISS	9	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))YC(Carbamidomethyl (C))GKRISS_					0	2	0		ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	565.757701	1129.50085	0.47148	0.00026674	-3.6086	-0.0020416	-3.1371	-0.0017748	565.7555432256772	53.234	0.46477	53.252	53.043	53.508	0.01749	-0.060579	-0.00065882	NaN	44.117	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54791			3953	5659	2612	2615			68;69				-0.058722193170524406
CYCGKRISS	9	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))YC(Carbamidomethyl (C))GKRISS_					0	2	0		ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	565.757701	1129.50085	0.38651	0.00021867	-3.4464	-0.0019498	-3.0599	-0.0017312	565.7556213590972	53.367	0.34924	53.415	53.203	53.552	0.047802	0.10201	-0.00047532	NaN	44.117	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107350			3954	5659	2612	2615			68;69				-0.058722193170524406
CYCGKRISS	9	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))YC(Carbamidomethyl (C))GKRISS_					0	2	0		ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	565.757701	1129.50085	0.43877	0.00024824	-3.2273	-0.0018259	-2.7886	-0.0015776	565.755828927771	53.299	0.31926	53.37	53.159	53.478	0.070713	0.057164	-0.00022744	NaN	44.117	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60656			3955	5659	2612	2615			68;69				-0.058722193170524406
CYCGKRISS	9	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))YC(Carbamidomethyl (C))GKRISS_					0	2	0		ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	ENSG00000161921|ENST00000293778|CXCL16	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	565.757701	1129.50085	-0.16901	-9.5621E-05	-3.4638	-0.0019597	-3.6328	-0.0020553	565.7556181187078	53.346	0.47253	53.284	53.049	53.522	-0.062061	-0.028928	-0.00049501	NaN	44.117	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	117430			3956	5659	2612	2615			68;69				-0.058722193170524406
CYCSWSGHD	9	Unmodified	_CYCSWSGHD_					0	0	0		ENST00000397054.7_1_1:43212112-43212304:-|nuORF	ENST00000397054.7_1_1:43212112-43212304:-|nuORF	ENST00000397054.7_1_1:43212112-43212304:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	529.17529296875	2	529.178752	1056.34295	-1.6186	-0.00085651	-2.9482	-0.0015601	-4.5667	-0.0024166	529.1771294341809	30.823	0.49447	30.823	30.597	31.091	0					21	16	2	0	0	0	0.7932	1	1425	1425		17.365	0	1	30389			3957	11134	2613	2616	4500	4500					-0.18296718576289095
CYCSWSGHD	9	Unmodified	_CYCSWSGHD_					0	0	0		ENST00000397054.7_1_1:43212112-43212304:-|nuORF	ENST00000397054.7_1_1:43212112-43212304:-|nuORF	ENST00000397054.7_1_1:43212112-43212304:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	529.178752	1056.34295	-0.49151	-0.0002601	-3.3317	-0.001763	-3.8232	-0.0020231	529.6782188336053	30.444	0.2644	30.472	30.318	30.582	0.028618	-0.17522	-0.00022093	NaN	17.365	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31979			3958	11134	2613	2616							-0.18296718576289095
CYECDEKLST	10	Unmodified	_CYECDEKLST_					0	0	0		ENST00000369232.2_1_6:99949817-99958096:-|nuORF;nc|ENSG00000123552|Q70EL2-2|USP45;ENSG00000123552|ENST00000500704|USP45	ENST00000369232.2_1_6:99949817-99958096:-|nuORF	ENST00000369232.2_1_6:99949817-99958096:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	595.7382202148438	2	595.738839	1189.46313	-0.023521	-1.4012E-05	0.55981	0.0003335	0.53629	0.00031949	595.7391207757992	27.209	0.63194	27.25	26.955	27.587	0.040834					30	21	2	0	0	0	0.86348	1	1217	1217		31.53	6.0796	1	79535			3959	3278	2614	2617	4501	4501					-0.12402775093187302
CYHRRGVR	8	Unmodified	_CYHRRGVR_					0	0	0			REV__ENSG00000198626|ENST00000366574|RYR2	REV__ENSG00000198626|ENST00000366574|RYR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3032836914062	2	523.774877	1045.5352	0.71725	0.00037568	-2.3732	-0.001243	-1.656	-0.00086737	523.7733778065912	86.757	0.82234	87.203	86.734	87.556	0.44628					38	19	3	0	0	0	0.4196	1	10106	10106		19.36	6.4008	1	530190	+		3960	23347	2615	2618	4502	4502					0.014254096767217561
CYHRRGVR	8	Unmodified	_CYHRRGVR_					0	0	0			REV__ENSG00000198626|ENST00000366574|RYR2	REV__ENSG00000198626|ENST00000366574|RYR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3033447265625	2	523.774877	1045.5352	-0.60826	-0.00031859	-0.6173	-0.00032333	-1.2256	-0.00064192	523.7742884048411	86.819	1.0641	87.274	86.655	87.719	0.4543					47	25	3	0	0	0	0.4196	1	10145	10145		35.201	24.335	1	445170	+		3961	23347	2615	2618	4503	4503					0.014254096767217561
CYLLWFPLPG	10	Unmodified	_CYLLWFPLPG_					0	0	0			REV__ENST00000536017.1_1_11:64053906-64055433:+|nuORF	REV__ENST00000536017.1_1_11:64053906-64055433:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8583984375	2	604.81227	1207.60999	0.40136	0.00024275	2.9832	0.0018043	3.3846	0.0020471	605.3160821307449	79.63	0.46828	80.047	79.785	80.253	0.41621					19	10	2	0	0	0	0.37624	1	9107	9107		19.36	1.995	1	126240	+		3962	21911	2616	2619	4504	4504					0.014487346447140226
CYLLWFPLPG	10	Unmodified	_CYLLWFPLPG_					0	0	0			REV__ENST00000536017.1_1_11:64053906-64055433:+|nuORF	REV__ENST00000536017.1_1_11:64053906-64055433:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	604.81227	1207.60999	-0.014336	-8.6704E-06	3.2341	0.001956	3.2197	0.0019473	604.8135798531507	79.508	0.46912	80.058	79.871	80.34	0.54945	0.0054968	0.00018446	NaN	19.36	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141210	+		3963	21911	2616	2619							0.014487346447140226
CYLTLPLPL	9	Unmodified	_CYLTLPLPL_					0	0	0		nc|ENSG00000114316|Q13107-2|USP4;ENSG00000114316|ENST00000265560|USP4;ENST00000485450.5_1_3:49315728-49349110:-|nuORF	nc|ENSG00000114316|Q13107-2|USP4	nc|ENSG00000114316|Q13107-2|USP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7941284179688	2	516.793546	1031.57254	-1.1229	-0.00058032	0.76862	0.00039722	-0.35431	-0.0001831	516.7939356050468	88.475	2.4458	88.946	87.694	90.139	0.47068					178	59	4	0	0	0	0.67235	1	10447	10447		42.474	10.52	1	833210			3964	2767	2617	2620	4505	4505					0.05801643379095367
CYPFSYSD	8	Unmodified	_CYPFSYSD_					0	0	0		nc|ENSG00000084693|Q8NDL9-3|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;ENSG00000084693|ENST00000360131|AGBL5;ENST00000477136.5_1_2:27275826-27278122:+|nuORF;ENST00000489683.5_1_2:27275826-27279072:+|nuORF	nc|ENSG00000084693|Q8NDL9-3|AGBL5	nc|ENSG00000084693|Q8NDL9-3|AGBL5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.296142578125	2	491.186568	980.358584	-0.07976	-3.9177E-05	-3.181	-0.0015625	-3.2608	-0.0016016	491.18478085467814	58.717	0.42715	58.703	58.436	58.863	-0.013729					21	15	2	0	0	0	0.4196	1	5367	5367		20.482	0	1	27565			3965	1522	2618	2621	4506	4506					-0.13238108787595593
CYQCQYPKEG	10	Carbamidomethyl (C)	_CYQC(Carbamidomethyl (C))QYPKEG_	C(0.013)YQC(0.987)QYPKEG		C(-19)YQC(19)QYPKEG		0	1	0			REV__ENSG00000067646|ENST00000155093|ZFY;REV__nc|ENSG00000005889|P17010-2|ZFX;REV__nc|ENSG00000147180|Q9Y462|ZNF711	REV__nc|ENSG00000005889|P17010-2|ZFX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	638.2590942382812	2	638.260273	1274.50599	-0.94164	-0.00060101	1.0195	0.00065074	0.07791	4.9727E-05	638.260785708912	81.621	0.8294	81.735	81.352	82.181	0.11426					43	18	3	0	0	0	0.77314	1	7790	7790		40.778	6.8565	2	517350	+		3966	16092;16546;20060	2619	2622	4507	4507	212				-0.12027960245131908
CYSGLVAR	8	Unmodified	_CYSGLVAR_					0	0	0			REV__ENST00000573005.1_1_16:48398925-48399497:-|nuORF	REV__ENST00000573005.1_1_16:48398925-48399497:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.291015625	2	434.720913	867.427273	0.19829	8.6201E-05	0.88913	0.00038652	1.0874	0.00047273	434.7211982111816	77.382	0.71901	77.95	77.661	78.38	0.56835					25	16	2	0	0	0	0.4196	1	8809	8809		17.365	0	1	87225	+		3967	28954	2620	2623	4508	4508					-0.011743996972313653
CYSKKLKKLP	10	Unmodified	_CYSKKLKKLP_					0	0	0			REV__nc|ENSG00000241721|G2XKQ0|SUMO1P1	REV__nc|ENSG00000241721|G2XKQ0|SUMO1P1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.367431640625	2	604.365201	1206.71585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.43	1	114.49	113.99	114.99	0.061073								0	0	0	0.45132	1	12232	12232		11.511	1.2458	1		+		3968	30231	2621	2624	4509	4509					0.12076070490184065
CYSKKLKKLP	10	Unmodified	_CYSKKLKKLP_					0	0	0			REV__nc|ENSG00000241721|G2XKQ0|SUMO1P1	REV__nc|ENSG00000241721|G2XKQ0|SUMO1P1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3679809570312	2	604.365201	1206.71585	-1.2751	-0.00077064	4.1148	0.0024869	2.8397	0.0017162	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85251	1	12696	12696		19.997	3.5236	1	3346600	+		3969	30231	2621	2624	4510	4510					0.12076070490184065
CYSTQVNGQI	10	Unmodified	_CYSTQVNGQI_					0	0	0			REV__ENST00000604509.5_1_10:122663607-122664201:+|nuORF	REV__ENST00000604509.5_1_10:122663607-122664201:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.7578125	2	556.755681	1111.49681	-1.1808	-0.00065742	4.3113	0.0024003	3.1305	0.0017429	556.7579565354125	38.992	0.81724	39.547	39.236	40.053	0.55449					39	18	3	0	0	0	0.8545	1	3266	3266		36.447	3.6343	1	713790	+		3970	29358	2622	2625	4511	4511					-0.05447985539126421
CYSWESYQLMP	11	Unmodified	_CYSWESYQLMP_					0	0	0		ENST00000438609.5_1_2:172180771-172195744:-|nuORF	ENST00000438609.5_1_2:172180771-172195744:-|nuORF	ENST00000438609.5_1_2:172180771-172195744:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.7699279785156	3	469.530029	1405.56826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.409	1	32.52	32.02	33.02	0.11117								0	0	0	0.56276	1	1522	1522		23.378	8.6842	1				3971	11753	2623	2626	4512	4512					-0.11830233896785103
CYYGTWDSDC	10	Unmodified	_CYYGTWDSDC_					0	0	0			REV__nc|ENSG00000259207|P05106-2|ITGB3	REV__nc|ENSG00000259207|P05106-2|ITGB3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	606.7882690429688	2	606.702257	1211.38996	0.05406	3.2798E-05	-2.1628	-0.0013122	-2.1087	-0.0012794	606.7013062823066	79.46	0.34191	80.01	79.871	80.213	0.54945					12	7	2	0	0	0	0.37624	1	9139	9139		6.3127	0	1	93986	+		3972	23932	2624	2627	4513	4513					-0.20727903815804893
DAAALHKGR	9	Unmodified	_DAAALHKGR_					0	0	0		ENST00000597330.1_1_19:58556424-58557021:+|nuORF	ENST00000597330.1_1_19:58556424-58557021:+|nuORF	ENST00000597330.1_1_19:58556424-58557021:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7605285644531	2	469.761958	937.509363	-1.0651	-0.00050035	-0.060913	-2.8615E-05	-1.126	-0.00052896	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.77546	1	1888	1888		31.955	2.8053	1	219920			3973	14351	2625	2628	4514	4514					0.03810838706078812
DAADIRFVY	9	Unmodified	_DAADIRFVY_					0	0	0		ENSG00000102265|ENST00000218388|TIMP1	ENSG00000102265|ENST00000218388|TIMP1	ENSG00000102265|ENST00000218388|TIMP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.26953125	2	535.269281	1068.52401	-0.44513	-0.00023827	0.52224	0.00027954	0.077104	4.1271E-05	535.2694373179344	67.767	0.87857	68.315	68.072	68.951	0.54819					53	20	4	0	0	0	0.15708	1	7444	7444		82.75	22.632	1	1414700			3974	1996	2626	2629	4515	4515					-0.007511339364327796
DAADIRFVY	9	Unmodified	_DAADIRFVY_					0	0	0		ENSG00000102265|ENST00000218388|TIMP1	ENSG00000102265|ENST00000218388|TIMP1	ENSG00000102265|ENST00000218388|TIMP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	535.269281	1068.52401	0.69845	0.00037386	-0.62743	-0.00033584	0.071016	3.8013E-05	535.2687215425955	67.862	0.96434	68.247	67.983	68.947	0.38482	-0.034246	-0.00094181	NaN	82.75	53	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1280200			3975	1996	2626	2629							-0.007511339364327796
DAAKNQVAM	9	Unmodified	_DAAKNQVAM_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2	ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2349548339844	2	474.234384	946.454216	-0.6635	-0.00031465	-0.24424	-0.00011583	-0.90774	-0.00043048	474.23411561623965	29.405	0.56163	29.375	29.214	29.775	-0.029209					19	12	2	0	0	0	0.44421	1	1852	1852		54.776	2.4771	1	239540			3976	2497;8438	2627	2630	4516	4516					-0.021153358766923702
DAALLCLVVN	10	Unmodified	_DAALLCLVVN_					0	0	0			REV__nc|ENSG00000116717|P24522-2|GADD45A	REV__nc|ENSG00000116717|P24522-2|GADD45A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.7817993164062	2	515.78371	1029.55287	0.49912	0.00025744	-3.1158	-0.0016071	-2.6167	-0.0013496	515.781994279127	15.95	0.34297	15.351	15.212	15.555	-0.59873					12	7	2	0	0	0	0.8608	1	78	78		34.173	1.3601	1	250790	+		3977	18218	2628	2631	4517	4517					0.039272673683626635
DAALLCLVVN	10	Unmodified	_DAALLCLVVN_					0	0	0			REV__nc|ENSG00000116717|P24522-2|GADD45A	REV__nc|ENSG00000116717|P24522-2|GADD45A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	515.78371	1029.55287	0.49912	0.00025744	-3.1158	-0.0016071	-2.6167	-0.0013496	515.781994279127	15.95	0.34297	15.351	15.212	15.555	-0.59873	-0.053236	0.00019052	NaN	34.173	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	250790	+		3978	18218	2628	2631							0.039272673683626635
DAAQVIII	8	Unmodified	_DAAQVIII_					0	0	0			REV__ENSG00000136237|ENST00000665637|RAPGEF5	REV__ENSG00000136237|ENST00000665637|RAPGEF5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7518005371094	2	421.752736	841.490919	-1.7853	-0.00075295	-1.0169	-0.00042889	-2.8022	-0.0011818	421.75222562050067	74.965	1.8809	75.091	73.889	75.77	0.12545					84	60	2	0	0	0	0.86791	1	7012	7012		28.254	1.4582	1	102790	+		3979	19296	2629	2632	4518	4518					0.06383284011531032
DADADCMD	8	Unmodified	_DADADCMD_					0	0	0		ENSG00000123384|ENST00000243077|LRP1;ENST00000451724.6_1_12:57597195-57598570:+|nuORF	ENSG00000123384|ENST00000243077|LRP1	ENSG00000123384|ENST00000243077|LRP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2615661621094	2	428.128393	854.242233	2.6441	0.001132	-0.2212	-9.4701E-05	2.4229	0.0010373	428.128593054973	90.582	0.19566	90.628	90.555	90.751	0.046448					5	4	2	0	0	0	0.4196	1	9389	9389		20.482	0	1	34363			3980	3271	2630	2633	4519	4519					-0.19071795349805143
DADRANDVLEA	11	Unmodified	_DADRANDVLEA_					0	0	0			REV__ENSG00000133422|ENST00000397641|MORC2	REV__ENSG00000133422|ENST00000397641|MORC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.7787475585938	2	594.778199	1187.54184	0.63175	0.00037575	2.6293	0.0015639	3.2611	0.0019396	594.7796487925674	34.389	0.61836	34.6	34.359	34.978	0.21002					39	14	4	0	0	0	0.60058	1	2571	2571		44.377	5.1244	1	1526100	+		3981	19077	2631	2634	4520	4520					-0.044424634722190603
DAEKKEGQEKE	11	Unmodified	_DAEKKEGQEKE_					0	0	0		ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	646.313720703125	2	645.812239	1289.60992	-1.097	-0.00070848	1.1849	0.00076519	0.08782	5.6715E-05	645.8129719767265	26.17	0.35815	26.17	26.022	26.38	0					29	15	2	0	0	0	0.58516	1	990	990		45.908	3.57	1	61421			3982	2044	2632	2635	4521	4521					-0.02329638612263807
DAEKKEGQEKE	11	Unmodified	_DAEKKEGQEKE_					0	0	0		ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	646.3120727539062	2	645.812239	1289.60992	1.0677	0.00068953	-0.74177	-0.00047905	0.32592	0.00021048	645.811490367663	25.892	0.38939	25.916	25.783	26.173	0.024021					37	17	3	0	0	0	0.32541	1	959	959		68.846	1.8842	1	116810			3983	2044	2632	2635	4522	4522					-0.02329638612263807
DAEKKEGQEKE	11	Unmodified	_DAEKKEGQEKE_					0	0	0		ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	645.8138427734375	2	645.812239	1289.60992	3.6117	0.0023325	-3.3203	-0.0021443	0.29142	0.0001882	645.8099826646117	26.608	0.49811	26.267	26.051	26.549	-0.34035					23	10	3	0	0	0	0.34641	1	1484	1484		63.534	1.4264	1	241700			3984	2044	2632	2635	4523	4523					-0.02329638612263807
DAEKTPAVSI	10	Unmodified	_DAEKTPAVSI_					0	0	0		ENSG00000170385|ENST00000367001|SLC30A1	ENSG00000170385|ENST00000367001|SLC30A1	ENSG00000170385|ENST00000367001|SLC30A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3097534179688	2	515.774396	1029.53424	-0.72887	-0.00037593	1.1073	0.00057111	0.37842	0.00019518	515.7751534333056	57.804	0.62725	58.198	57.856	58.484	0.39408					33	15	3	0	0	0	0.37624	1	6023	6023		30.318	0	1	550160			3985	6582	2633	2636	4524	4524					0.020654289981621332
DAFKKMIKLAD	11	Unmodified	_DAFKKMIKLAD_					0	0	0		nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;ENSG00000080493|ENST00000264485|SLC4A4;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4;nc|ENSG00000080493|Q9Y6R1-4|SLC4A4;nc|ENSG00000080493|Q9Y6R1-3|SLC4A4	nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3577880859375	2	640.357573	1278.70059	1.5852	0.0010151	0.3139	0.00020101	1.8991	0.0012161	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.61369	1	10304	10304		42.864	2.8061	1	616450			3986	1441	2634	2637	4525	4525					0.07239158902348208
DAFKKMIKLAD	11	Unmodified	_DAFKKMIKLAD_					0	0	0		nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;ENSG00000080493|ENST00000264485|SLC4A4;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4;nc|ENSG00000080493|Q9Y6R1-4|SLC4A4;nc|ENSG00000080493|Q9Y6R1-3|SLC4A4	nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3585815429688	2	640.357573	1278.70059	1.5776	0.0010102	0.38375	0.00024574	1.9614	0.001256	640.3576428069522	98.956	2.793	99.317	98.237	101.03	0.36136					173	69	3	0	0	0	0.57736	1	11953	11953		46.457	7.2039	1	1011800			3987	1441	2634	2637	4526	4526					0.07239158902348208
DAGGRHGACEQ	11	Unmodified	_DAGGRHGACEQ_					0	0	0			REV__ENST00000318430.9_1_17:76133438-76134232:+|nuORF	REV__ENST00000318430.9_1_17:76133438-76134232:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.7343139648438	2	550.730529	1099.4465	2.5643	0.0014122	1.668	0.00091863	4.2323	0.0023309	550.7310212057594	25.674	0.67299	25.242	24.895	25.568	-0.4311					43	15	4	0	0	0	0.57736	1	1347	1347		46.457	3.5925	1	329660	+		3988	24973	2635	2638	4527	4527					-0.09924095144265266
DAGIRGTPKV	10	Unmodified	_DAGIRGTPKV_					0	0	0		ENSG00000107957|ENST00000369774|SH3PXD2A;nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A;nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A	ENSG00000107957|ENST00000369774|SH3PXD2A	ENSG00000107957|ENST00000369774|SH3PXD2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.3077697753906	2	507.290548	1012.56654	0.11561	5.8646E-05	-0.97934	-0.00049681	-0.86373	-0.00043816	507.290000608787	49.029	0.61785	49.023	48.693	49.311	-0.0056419					24	13	3	0	0	0	0.37624	1	4073	4073		9.1829	0	1	136890			3989	2383	2636	2639	4528	4528					0.06076261191822141
DAGIYPRFLR	10	Unmodified	_DAGIYPRFLR_					0	0	0			REV__ENST00000231498.7_1_5:37299070-37299611:-|nuORF	REV__ENST00000231498.7_1_5:37299070-37299611:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2468566894531	3	403.224257	1206.65094	-1.7907	-0.00072206	-4.1772	-0.0016843	-5.9679	-0.0024064	403.2227051643717	104.27	0.3437	104.44	104.38	104.73	0.17096					9	8	2	0	0	0	0.37624	1	11089	11089		9.6461	0	1	83365	+		3990	24198	2637	2640	4529	4529					0.05588212008547089
DAGPPTHAF	9	Unmodified	_DAGPPTHAF_					0	0	0		ENSG00000197329|ENST00000358912|PELI1;ENSG00000139946|ENST00000267460|PELI2	ENSG00000197329|ENST00000358912|PELI1	ENSG00000197329|ENST00000358912|PELI1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79205322265625	2	456.714142	911.413731	-2.8573	-0.001305	0.95367	0.00043555	-1.9037	-0.00086943	456.7144369756787	41.402	0.66027	41.816	41.576	42.237	0.4139					31	17	2	0	0	0	0.20752	1	3639	3639		27.882	0	1	854830			3991	4403	2638	2641	4530	4530					-0.04551934204812369
DAGSIPGVV	9	Unmodified	_DAGSIPGVV_					0	0	0			REV__nc|ENSG00000134760|Q02413-2|DSG1	REV__nc|ENSG00000134760|Q02413-2|DSG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.7210693359375	2	407.718893	813.423233	2.6827	0.0010938	1.362	0.00055532	4.0447	0.0016491	407.7196256873708	102.15	0.80925	102.41	102.07	102.88	0.26322					65	19	4	0	0	0	0.7932	1	12385	12385		25.45	2.4077	1	5496600	+		3992	19163	2639	2642	4531	4531					0.009058340807200693
DAHPTLVTY	9	Unmodified	_DAHPTLVTY_					0	0	0		ENST00000396522.6_1_14:21967741-21972178:-|nuORF;ENST00000536201.5_1_14:21969853-21979446:-|nuORF;ENSG00000165819|ENST00000298717|METTL3	ENST00000396522.6_1_14:21967741-21972178:-|nuORF	ENST00000396522.6_1_14:21967741-21972178:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7552185058594	2	508.756007	1015.49746	0.36101	0.00018367	-0.99793	-0.0005077	-0.63692	-0.00032403	508.7554155569599	50.026	0.6628	50.474	50.143	50.805	0.44761					40	14	4	0	0	0	0.47272	1	4905	4905		53.351	3.9099	1	1061900			3993	6130	2640	2643	4532	4532					-0.009668228277405433
DAIADACQALV	11	Unmodified	_DAIADACQALV_					0	0	0		ENSG00000173064|ENST00000682272|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.26416015625	2	545.265881	1088.51721	0.27833	0.00015177	-3.5816	-0.0019529	-3.3032	-0.0018011	545.2636578829265	52.758	0.64317	52.776	52.4	53.043	0.017487					31	15	3	0	0	0	0.53495	1	4605	4605		49.442	1.482	1	246060			3994	6820	2641	2644	4533	4533					-0.023508148793325745
DAIGPREQW	9	Unmodified	_DAIGPREQW_					0	0	0		ENST00000514482.1_1_4:190862182-190882061:+|nuORF;ENSG00000109536|ENST00000226798|FRG1;ENST00000278882.8_1_20:29623179-29633907:+|nuORF	ENST00000514482.1_1_4:190862182-190882061:+|nuORF	ENST00000514482.1_1_4:190862182-190882061:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	536.2638549804688	2	536.26453	1070.51451	-1.2784	-0.00068558	1.3701	0.00073471	0.091623	4.9134E-05	536.2650926636344	51.576	0.80385	51.576	51.219	52.023	0					45	20	3	0	0	0	0.066118	6	4180	4158;4163;4172;4180;4189;4199		101.25	29.629	1	479160			3995	2467	2642	2645	4534;4535;4536;4537;4538;4539	4537					-0.01792902221973236
DAIKESLSSA	10	Unmodified	_DAIKESLSSA_					0	0	0			REV__nc|ENSG00000139350|Q8NHV4-3|NEDD1	REV__nc|ENSG00000139350|Q8NHV4-3|NEDD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2232666015625	2	510.764029	1019.5135	1.4097	0.00072004	4.0614	0.0020744	5.4711	0.0027944	510.7656491736294	92.7	0.41449	93.146	92.862	93.276	0.44662					11	9	2	0	0	0	0.37624	1	11010	11010		32.812	20.606	1	50674	+		3996	19535	2643	2646	4540	4540					0.004528386184915689
DAKIRIFDL	9	Unmodified	_DAKIRIFDL_					0	0	0		ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENSG00000165496|ENST00000298283|RPL10L;ENSG00000147403|ENST00000369817|RPL10;ENST00000482732.1_1_X:153627802-153628024:+|nuORF	ENST00000489200.5_1_X:153627802-153628283:+|nuORF	ENST00000489200.5_1_X:153627802-153628283:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.8164672851562	2	545.816399	1089.61824	0.11328	6.183E-05	-0.0090844	-4.9584E-06	0.1042	5.6872E-05	545.8161499984518	68.441	0.82027	68.404	68.067	68.887	-0.036301					63	27	3	0	0	0	0.076066	3	6599	6592;6599;6627		98.582	9.573	1	496740			3997	4899	2644	2647	4541;4542;4543	4542					0.07702004885709357
DAKIRIFDL	9	Unmodified	_DAKIRIFDL_					0	0	0		ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENSG00000165496|ENST00000298283|RPL10L;ENSG00000147403|ENST00000369817|RPL10;ENST00000482732.1_1_X:153627802-153628024:+|nuORF	ENST00000489200.5_1_X:153627802-153628283:+|nuORF	ENST00000489200.5_1_X:153627802-153628283:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.8167724609375	2	545.816399	1089.61824	-0.075285	-4.1092E-05	0.18415	0.00010051	0.10887	5.9423E-05	545.8162740804513	68.285	0.858	68.317	68.023	68.881	0.032249					72	31	3	0	0	0	0.15708	5	6514	6506;6514;6523;6531;6541		82.75	16.321	1	490730			3998	4899	2644	2647	4544;4545;4546;4547;4548	4545					0.07702004885709357
DAKIRIFDL	9	Unmodified	_DAKIRIFDL_					0	0	0		ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENSG00000165496|ENST00000298283|RPL10L;ENSG00000147403|ENST00000369817|RPL10;ENST00000482732.1_1_X:153627802-153628024:+|nuORF	ENST00000489200.5_1_X:153627802-153628283:+|nuORF	ENST00000489200.5_1_X:153627802-153628283:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	545.816399	1089.61824	-0.35493	-0.00019373	0.57861	0.00031582	0.22368	0.00012209	545.8165070253756	68.484	0.66158	68.505	68.201	68.862	0.021591	0.096278	0.00032148	NaN	98.582	70	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	488120			3999	4899	2644	2647							0.07702004885709357
DALENSERLL	10	Unmodified	_DALENSERLL_					0	0	0			REV__ENST00000502875.1_1_4:141566092-141566329:-|nuORF	REV__ENST00000502875.1_1_4:141566092-141566329:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.3016967773438	2	580.30131	1158.58807	-0.047463	-2.7543E-05	0.33566	0.00019478	0.2882	0.00016724	580.3014620786945	49.57	0.81506	50.415	49.993	50.809	0.84501					45	19	3	0	0	0	0.33399	1	4855	4855		69.628	2.134	1	2193500	+		4000	27830	2645	2648	4549	4549					0.0151160142986555
DALGHFFQY	9	Unmodified	_DALGHFFQY_					0	0	0		ENSG00000131788|ENST00000393045|PIAS3	ENSG00000131788|ENST00000393045|PIAS3	ENSG00000131788|ENST00000393045|PIAS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.2572021484375	2	549.256174	1096.49779	-0.4244	-0.0002331	0.33208	0.0001824	-0.092315	-5.0705E-05	549.2563216652526	76.503	0.54519	76.903	76.574	77.119	0.39969					23	14	2	0	0	0	0.35373	1	8676	8676		60.972	20.399	1	414500			4001	3749	2646	2649	4550	4550					-0.046594031078939224
DALGHFFQY	9	Unmodified	_DALGHFFQY_					0	0	0		ENSG00000131788|ENST00000393045|PIAS3	ENSG00000131788|ENST00000393045|PIAS3	ENSG00000131788|ENST00000393045|PIAS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.2562866210938	2	549.256174	1096.49779	-0.19675	-0.00010807	0.7512	0.0004126	0.55445	0.00030453	549.2561095018983	76.349	0.53191	76.917	76.599	77.131	0.56835					43	14	4	0	0	0	0.17307	1	8698	8698		79.451	11.957	1	428480			4002	3749	2646	2649	4551	4551					-0.046594031078939224
DALPLTRLQA	10	Unmodified	_DALPLTRLQA_					0	0	0			REV__ENST00000569787.1_1_16:22328322-22336592:+|nuORF	REV__ENST00000569787.1_1_16:22328322-22336592:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3223876953125	2	549.319306	1096.62406	0.85078	0.00046735	-3.9097	-0.0021477	-3.0589	-0.0016803	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.86698	1	10694	10694		28.081	2.0181	1	2023500	+		4003	16438	2647	2650	4552	4552					0.0796110339738334
DALRHGDEP	9	Unmodified	_DALRHGDEP_					0	0	0			REV__ENSG00000130052|ENST00000374599|STARD8	REV__ENSG00000130052|ENST00000374599|STARD8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.6058044433594	2	505.238513	1008.46247	-0.6868	-0.000347	4.1441	0.0020938	3.4573	0.0017468	505.2404897778126	46.668	0.58316	46.639	46.355	46.938	-0.028782					20	13	2	0	0	0	0.20789	1	3879	3879		29.15	7.1897	1	102820	+		4004	18844	2648	2651	4553	4553					-0.041420656357104235
DALRHGDEP	9	Unmodified	_DALRHGDEP_					0	0	0			REV__ENSG00000130052|ENST00000374599|STARD8	REV__ENSG00000130052|ENST00000374599|STARD8	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	505.238513	1008.46247	0.19307	9.7544E-05	3.3885	0.001712	3.5816	0.0018096	505.24016101888486	46.815	0.58001	46.801	46.495	47.075	-0.013821	0.078009	-0.00049533	NaN	29.15	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84023	+		4005	18844	2648	2651							-0.041420656357104235
DALVITHY	8	Unmodified	_DALVITHY_					0	0	0		ENSG00000109917|ENST00000227322|ZPR1	ENSG00000109917|ENST00000227322|ZPR1	ENSG00000109917|ENST00000227322|ZPR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.248046875	2	466.247818	930.481082	-0.046845	-2.1841E-05	0.37094	0.00017295	0.3241	0.00015111	466.24790957253805	55.276	0.58589	55.677	55.405	55.991	0.40101					23	13	2	0	0	0	0.93786	1	5666	5666		53.351	10.955	1	480590			4006	2491	2649	2652	4554	4554					0.013060960061238802
DAMNNIHQSGC	11	Unmodified	_DAMNNIHQSGC_					0	0	0		nc|ENSG00000144130|Q86YG4|NT5DC4;ENSG00000144130|ENST00000688554|NT5DC4	nc|ENSG00000144130|Q86YG4|NT5DC4	nc|ENSG00000144130|Q86YG4|NT5DC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	595.2423095703125	2	595.239872	1188.46519	-0.59546	-0.00035444	4.356	0.0025928	3.7605	0.0022384	595.2423120609167	64.87	0.63185	64.875	64.544	65.176	0.0046997					42	17	3	0	0	0	0.65746	1	6071	6071		37.812	2.1932	1	350880			4007	4692	2650	2653	4555	4555					-0.12150301564702204
DANKKKRA	8	Unmodified	_DANKKKRA_					0	0	0		nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906|ILF3;ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10792469-10795138:+|nuORF	nc|ENSG00000129351|Q12906-5|ILF3	nc|ENSG00000129351|Q12906-5|ILF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7782287597656	2	465.777608	929.540663	-0.25577	-0.00011913	0.16818	7.8335E-05	-0.08759	-4.0797E-05	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.87479	1	7771	7771		30.504	1.3541	1	451640			4008	3584	2651	2654	4556	4556					0.07307411740180214
DANRVIRT	8	Unmodified	_DANRVIRT_					0	0	0			REV__ENSG00000172716|ENST00000685675|SLFN11	REV__ENSG00000172716|ENST00000685675|SLFN11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7668762207031	2	472.76724	943.519927	-1.568	-0.00074129	1.5546	0.00073498	-0.013349	-6.3108E-06	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.91977	1	8021	8021		45.952	5.3793	1	404330	+		4009	21848	2652	2655	4557	4557					0.04590821360534392
DAPAPAARGW	10	Unmodified	_DAPAPAARGW_					0	0	0		ENST00000334049.10_1_18:11689618-11752858:+|nuORF	ENST00000334049.10_1_18:11689618-11752858:+|nuORF	ENST00000334049.10_1_18:11689618-11752858:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.25048828125	2	506.253966	1010.49338	-1.6382	-0.00082933	0.20971	0.00010617	-1.4285	-0.00072317	506.25395587471024	37.705	1.0151	37.705	37.395	38.41	0					69	24	5	0	0	0	0.3985	1	2326	2326		64.207	14.183	1	1276600			4010	10141	2653	2656	4558	4558					-0.011448675308201928
DAPAPAARGW	10	Unmodified	_DAPAPAARGW_					0	0	0		ENST00000334049.10_1_18:11689618-11752858:+|nuORF	ENST00000334049.10_1_18:11689618-11752858:+|nuORF	ENST00000334049.10_1_18:11689618-11752858:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	506.253966	1010.49338	-0.5211	-0.00026381	-0.27924	-0.00014137	-0.80034	-0.00040518	506.2535775066462	37.925	0.35033	37.942	37.76	38.11	0.016563	0.039543	-0.00026958	NaN	64.207	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78751			4011	10141	2653	2656							-0.011448675308201928
DAPAPAARGW	10	Unmodified	_DAPAPAARGW_					0	0	0		ENST00000334049.10_1_18:11689618-11752858:+|nuORF	ENST00000334049.10_1_18:11689618-11752858:+|nuORF	ENST00000334049.10_1_18:11689618-11752858:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	506.253966	1010.49338	0.077772	3.9373E-05	-0.9047	-0.00045801	-0.82692	-0.00041863	506.25341384407653	37.602	0.46418	37.915	37.663	38.127	0.31312	0.012978	-0.00090286	NaN	64.207	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109250			4012	10141	2653	2656							-0.011448675308201928
DAPAPAARGW	10	Unmodified	_DAPAPAARGW_					0	0	0		ENST00000334049.10_1_18:11689618-11752858:+|nuORF	ENST00000334049.10_1_18:11689618-11752858:+|nuORF	ENST00000334049.10_1_18:11689618-11752858:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	506.253966	1010.49338	1.2066	0.00061084	-2.7295	-0.0013818	-1.5229	-0.00077099	506.25236650067836	37.561	0.42703	38.047	37.747	38.174	0.48581	0.14447	-0.0027505	NaN	64.207	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132370			4013	10141	2653	2656							-0.011448675308201928
DAPAPMEL	8	Unmodified	_DAPAPMEL_					0	0	0			REV__ENSG00000225614|ENST00000565624|ZNF469	REV__ENSG00000225614|ENST00000565624|ZNF469	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.19891357421875	2	422.199479	842.384405	0.088661	3.7433E-05	-1.7622	-0.00074401	-1.6736	-0.00070657	422.198858438519	84.305	3.2598	84.752	82.851	86.111	0.44736					161	79	3	0	0	0	0.84341	1	9806	9806		24.203	1.166	1	1051400	+		4014	23739	2654	2657	4559	4559					-0.04309214545298801
DAPGPGTSVKL	11	Unmodified	_DAPGPGTSVKL_					0	0	0			REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.28125	2	521.282389	1040.55022	-1.7498	-0.00091212	0.86531	0.00045107	-0.88446	-0.00046105	521.2827715356772	42.58	0.70127	43.278	42.97	43.672	0.69754					29	16	2	0	0	0	0.33509	1	3826	3826		65.465	7.2355	1	1219500	+		4015	18180	2655	2658	4560	4560					0.031571352350511006
DAPLFISH	8	Unmodified	_DAPLFISH_					0	0	0			REV__ENSG00000118804|ENST00000237642|STBD1	REV__ENSG00000118804|ENST00000237642|STBD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2742004394531	2	450.23471	898.454868	-1.7764	-0.00079978	-0.44209	-0.00019904	-2.2185	-0.00099883	450.23485327843457	93.057	0.32687	93.25	93.107	93.434	0.19239					12	7	2	0	0	0	0.4196	1	9405	9405		19.36	0	1	108460	+		4016	18328	2656	2659	4561	4561					0.001578268346634104
DAPLHLKY	8	Unmodified	_DAPLHLKY_					0	0	0			REV__ENSG00000052795|ENST00000264433|FNIP2	REV__ENSG00000052795|ENST00000264433|FNIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.763916015625	2	478.763635	955.512717	-0.019765	-9.4628E-06	-0.19455	-9.3141E-05	-0.21431	-0.0001026	478.76333815385567	51.126	0.7417	51.878	51.614	52.356	0.75174					42	17	3	0	0	0	0.93786	1	5085	5085		53.351	8.8204	1	1765200	+		4017	16384	2657	2660	4562	4562					0.03318088760090632
DAPLRLRSIH	10	Unmodified	_DAPLRLRSIH_					0	0	0		ENST00000495417.5_1_19:55105185-55110756:+|nuORF;nc|ENSG00000131042|Q8N423-4|LILRB2;ENSG00000104974|ENST00000251372|LILRA1;nc|ENSG00000131042|Q8N423-3|LILRB2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2	ENST00000495417.5_1_19:55105185-55110756:+|nuORF	ENST00000495417.5_1_19:55105185-55110756:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3430786132812	2	589.343646	1176.67274	-0.65438	-0.00038565	-0.61013	-0.00035958	-1.2645	-0.00074523	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.57924	1	10151	10151		51.193	14.746	1	16804000			4018	2176	2658	2661	4563	4563					0.09147016757128767
DAPSDSRVW	9	Unmodified	_DAPSDSRVW_					0	0	0			REV__ENST00000367203.8_1_1:204042386-204042737:+|nuORF	REV__ENST00000367203.8_1_1:204042386-204042737:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3136596679688	2	516.740888	1031.46722	0.89377	0.00046185	0.51237	0.00026476	1.4061	0.00072661	516.7416517575283	99.305	0.3268	99.352	99.22	99.546	0.047523					9	7	2	0	0	0	0.20789	1	10636	10636		27.882	0	1	47357	+		4019	25557	2659	2662	4564	4564					-0.04725181492926822
DAPTQLVIL	9	Unmodified	_DAPTQLVIL_					0	0	0		ENSG00000266074|ENST00000675386|BAHCC1;nc|ENSG00000266074|Q9P281|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2850646972656	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.105	1	78.231	77.731	78.731	0.12695								0	0	0	0.30053	1	7352	7352		30.504	1.3541	1				4020	8950	2660	2663	4565	4565					0.06871224728752168
DAPTQLVIL	9	Unmodified	_DAPTQLVIL_					0	0	0		ENSG00000266074|ENST00000675386|BAHCC1;nc|ENSG00000266074|Q9P281|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.28521728515625	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.23	1	78.357	77.857	78.857	0.12695								0	0	0	0.28223	1	7369	7369		37.812	8.662	1				4021	8950	2660	2663	4566	4566					0.06871224728752168
DAPVVATIIL	10	Unmodified	_DAPVVATIIL_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3100280761719	2	506.307875	1010.6012	-1.6116	-0.00081596	4.0929	0.0020723	2.4813	0.0012563	506.3098944096933	39.424	1.5109	39.424	38.73	40.241	0					81	36	3	0	0	0	0.8651	1	2500	2500		25.574	1.3713	1	128650	+		4022	20385;29943	2661	2664	4567	4567					0.09632084279917308
DARAIVRGS	9	Unmodified	_DARAIVRGS_					0	0	0			REV__ENST00000261647.9_2_17:15903016-15903175:+|nuORF	REV__ENST00000261647.9_2_17:15903016-15903175:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7671813964844	2	472.76724	943.519927	-1.568	-0.00074129	1.5546	0.00073498	-0.013349	-6.3108E-06	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.7932	1	8141	8141		24.519	1.4767	1	404330	+		4023	24400	2662	2665	4568	4568					0.04590821360523023
DARARLVV	8	Unmodified	_DARARLVV_					0	0	0			REV__ENST00000396623.7_1_8:67380599-67380680:+|nuORF	REV__ENST00000396623.7_1_8:67380599-67380680:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2744445800781	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.84341	1	9551	9551		24.203	0	1	26247000	+		4024	26148	2663	2666	4569	4569					0.08152313228526964
DARLFRLLQVL	11	Unmodified	_DARLFRLLQVL_					0	0	0			REV__ENST00000555171.1_1_14:60622706-60632135:-|nuORF	REV__ENST00000555171.1_1_14:60622706-60632135:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.60906982421875	3	448.610111	1342.8085	-1.3621	-0.00061104	-0.21826	-9.7912E-05	-1.5803	-0.00070895	448.6097970890054	75.668	1.3969	75.668	74.988	76.385	0					143	49	4	0	0	0	0.75457	1	6898	6898		21.032	1.0018	1	388770	+		4025	17207	2664	2667	4570	4570					0.15081291547926412
DARTETLLL	9	Unmodified	_DARTETLLL_					0	0	0		ENSG00000243449|ENST00000409248|C4orf48;nc|ENSG00000243449|Q5BLP8-3|NICOL1;nc|ENSG00000243449|Q5BLP8-2|NICOL1	ENSG00000243449|ENST00000409248|C4orf48	ENSG00000243449|ENST00000409248|C4orf48	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8007202148438	2	516.290214	1030.56587	0.77896	0.00040217	-0.83749	-0.00043239	-0.058534	-3.022E-05	516.289714148057	54.695	0.5062	55.101	54.822	55.328	0.40663					18	11	2	0	0	0	0.20012	1	5556	5556		82.305	0	1	168010			4026	8807	2665	2668	4571	4571					0.05181421752104143
DASAAKNPKL	10	Unmodified	_DASAAKNPKL_					0	0	0		ENSG00000004399|ENST00000324093|PLXND1;nc|ENSG00000004399|Q9Y4D7-2|PLXND1	ENSG00000004399|ENST00000324093|PLXND1	ENSG00000004399|ENST00000324093|PLXND1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.7818908691406	2	507.782556	1013.55056	0.88571	0.00044975	-1.5407	-0.00078236	-0.65502	-0.00033261	507.78156278549454	48.627	0.55497	49.532	49.25	49.805	0.90424					34	13	3	0	0	0	0.4503	1	4737	4737		59.931	10.395	1	1346600			4027	660	2666	2669	4572	4572					0.04432554954905754
DASAKSFL	8	Unmodified	_DASAKSFL_					0	0	0			REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7174987792969	2	419.718893	837.423233	-1.1151	-0.00046801	0.58547	0.00024573	-0.52959	-0.00022228	419.71903347482083	43.584	0.95621	43.548	43.145	44.101	-0.03582					46	22	3	0	0	0	0.9295	1	3430	3430		55.504	13.108	1	300650	+		4028	21170	2667	2670	4573	4573					-0.0019816591926655747
DASAKSFL	8	Unmodified	_DASAKSFL_					0	0	0			REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.7185974121094	2	419.718893	837.423233	-1.8624	-0.0007817	1.6945	0.0007112	-0.16797	-7.0499E-05	419.71948576487165	43.657	1.1512	43.665	43.227	44.378	0.0082664					62	27	3	0	0	0	0.91977	1	3015	3015		45.952	5.1738	1	963550	+		4029	21170	2667	2670	4574	4574					-0.0019816591926655747
DASAKSFL	8	Unmodified	_DASAKSFL_					0	0	0			REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7183837890625	2	419.718893	837.423233	0.21807	9.1526E-05	-0.48356	-0.00020296	-0.26549	-0.00011143	419.718555621952	43.498	1.1548	43.555	43.112	44.267	0.056744					66	27	3	0	0	0	0.79403	1	2976	2976		63.306	0.32785	1	860890	+		4030	21170	2667	2670	4575	4575					-0.0019816591926655747
DASAKSFL	8	Unmodified	_DASAKSFL_					0	0	0			REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.71844482421875	2	419.718893	837.423233	-0.30679	-0.00012876	0.071293	2.9923E-05	-0.23549	-9.8841E-05	419.71878265740355	43.537	1.2327	43.487	43.018	44.25	-0.050308					64	29	3	0	0	0	0.83456	1	2997	2997		60.972	0	1	823700	+		4031	21170	2667	2670	4576	4576					-0.0019816591926655747
DASDGSRPQS	10	Unmodified	_DASDGSRPQS_					0	0	0			REV__ENSG00000107554|ENST00000324109|DNMBP	REV__ENSG00000107554|ENST00000324109|DNMBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.22283935546875	2	510.223059	1018.43157	0.81379	0.00041522	-0.80234	-0.00040937	0.011449	5.8417E-06	510.2224882601542	88.451	1.4617	88.9	88.27	89.732	0.44893					86	35	4	0	0	0	0.8651	1	10443	10443		25.574	0	1	3535700	+		4032	17661	2668	2671	4577	4577					-0.07691263740605336
DASGAKLDY	9	Unmodified	_DASGAKLDY_					0	0	0		nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF	nc|ENSG00000082153|Q7L1Q6-2|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.2237548828125	2	470.224539	938.434526	-1.0744	-0.00050522	1.0548	0.000496	-0.019626	-9.2286E-06	470.22492522554853	39.087	0.80906	39.429	39.191	40	0.34187					35	18	3	0	0	0	0.33718	2	3261	3261;3275		62.107	1.8554	1	364610			4033	1479	2669	2672	4578;4579	4578					-0.03715388615819393
DASKLTYIY	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DASKLTYIY_					1	0	0		ENST00000383746.7_2_3:44396236-44396287:+|nuORF	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.2835083007812	2	558.284597	1114.55464	0.6293	0.00035133	-0.25186	-0.00014061	0.37743	0.00021071	558.2840698392147	75.208	0.67989	75.34	75.039	75.719	0.13208					41	18	3	0	0	0	0.67345	1	6998	6998		42.396	7.1954	1	144330			4034	10984	2670	2673	4580	4580					0.0019459965794794698
DASKVVTVF	9	Unmodified	_DASKVVTVF_					0	0	0		ENST00000515743.5_1_4:10078742-10093271:-|nuORF;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1;ENSG00000071127|ENST00000499869|WDR1	ENST00000515743.5_1_4:10078742-10093271:-|nuORF	ENST00000515743.5_1_4:10078742-10093271:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2689514160156	2	483.26875	964.522947	-0.79088	-0.00038221	1.1223	0.0005424	0.33147	0.00016019	483.269114465979	57.44	0.98806	57.834	57.411	58.399	0.39407					62	24	4	0	0	0	0.059135	3	5990	5967;5979;5990		104.06	8.2416	1	3790800			4035	1256	2671	2674	4581;4582;4583	4583					0.03926651694678185
DASKVVTVF	9	Unmodified	_DASKVVTVF_					0	0	0		ENST00000515743.5_1_4:10078742-10093271:-|nuORF;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1;ENSG00000071127|ENST00000499869|WDR1	ENST00000515743.5_1_4:10078742-10093271:-|nuORF	ENST00000515743.5_1_4:10078742-10093271:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.2689208984375	2	483.26875	964.522947	0.15939	7.7029E-05	0.10329	4.9919E-05	0.26269	0.00012695	483.2686398073137	57.331	1.4006	57.886	57.438	58.839	0.55512					68	34	4	0	0	0	0.026116	2	5959	5959;5984		120.87	16.337	1	3840500			4036	1256	2671	2674	4584;4585	4584					0.03926651694678185
DATRFKHL	8	Unmodified	_DATRFKHL_					0	0	0		ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.27130126953125	2	494.272158	986.529764	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.206	1	56.603	56.103	57.103	0.39672								0	0	0	0.30811	1	5795	5795		45.952	7.1458	1				4037	1521	2672	2675	4586	4586					0.03596009365901409
DAVVKHVL	8	Unmodified	_DAVVKHVL_					0	0	0		ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	ENSG00000122218|ENST00000241704|COPA	ENSG00000122218|ENST00000241704|COPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.7659606933594	2	440.766178	879.517802	-0.12651	-5.5762E-05	0.78336	0.00034528	0.65685	0.00028952	440.7663163090519	35.605	0.90321	35.593	35.208	36.111	-0.012203					56	19	4	0	0	0	0.3646	4	2236	2213;2224;2236;2251		85.359	10.668	1	292160			4038	3214	2673	2676	4587;4588;4589;4590	4589					0.07322392622711504
DAVVKHVL	8	Unmodified	_DAVVKHVL_					0	0	0		ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	ENSG00000122218|ENST00000241704|COPA	ENSG00000122218|ENST00000241704|COPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.7662048339844	2	440.766178	879.517802	-0.76695	-0.00033804	1.196	0.00052714	0.42902	0.0001891	440.76652816860985	35.673	1.0842	35.617	35.25	36.334	-0.055904					63	23	4	0	0	0	0.37266	3	2321	2311;2321;2333		97.473	18.471	1	450250			4039	3214	2673	2676	4591;4592;4593	4592					0.07322392622711504
DAVVKHVL	8	Unmodified	_DAVVKHVL_					0	0	0		ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	ENSG00000122218|ENST00000241704|COPA	ENSG00000122218|ENST00000241704|COPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.7661437988281	2	440.766178	879.517802	0.12011	5.294E-05	0.38781	0.00017093	0.50792	0.00022387	440.7661237364338	35.556	1.0405	35.565	35.17	36.211	0.0092812					64	22	4	0	0	0	0.3646	3	2262	2250;2262;2275		97.473	25.066	1	415040			4040	3214	2673	2676	4594;4595;4596	4595					0.07322392622711504
DAWGPPLLL	9	Unmodified	_DAWGPPLLL_					0	0	0		ENST00000485125.1_1_1:43768153-43770946:+|nuORF;nc|ENSG00000066056|P35590-3|TIE1;nc|ENSG00000066056|P35590-2|TIE1;ENSG00000066056|ENST00000372476|TIE1	ENST00000485125.1_1_1:43768153-43770946:+|nuORF	ENST00000485125.1_1_1:43768153-43770946:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2687683105469	2	491.273835	980.533118	-0.41025	-0.00020154	-3.7928	-0.0018633	-4.2031	-0.0020649	491.27177465944953	53.462	0.70897	54.076	53.696	54.405	0.61436					38	16	3	0	0	0	0.3636	1	5420	5420		60.294	6.9425	1	812070			4041	1149	2674	2677	4597	4597					0.04207259419922593
DAYTKKEL	8	Unmodified	_DAYTKKEL_					0	0	0		nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.25830078125	2	484.258382	966.502212	0.54374	0.00026331	-0.44125	-0.00021368	0.10249	4.9632E-05	484.25803837349594	26.204	0.58086	26.25	25.967	26.548	0.045509					23	14	2	0	0	0	0.88185	1	1092	1092		32.812	4.9302	1	51199			4042	4170	2675	2678	4598	4598					0.017620613149915698
DCCLLTFSVD	10	Unmodified	_DCCLLTFSVD_					0	0	0		ENSG00000123595|ENST00000464506|RAB9A;ENSG00000123570|ENST00000243298|RAB9B	ENSG00000123595|ENST00000464506|RAB9A	ENSG00000123595|ENST00000464506|RAB9A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.7962036132812	2	558.241018	1114.46748	-0.69395	-0.00038739	0.082793	4.6219E-05	-0.61116	-0.00034117	558.2409245311982	42.635	0.35623	42.597	42.44	42.796	-0.038223					15	8	2	0	0	0	0.37624	1	3280	3280		26.693	4.733	1	62504			4043	3280	2676	2679	4599	4599					-0.08517265879640945
DCDDGSDE	8	Unmodified	_DCDDGSDE_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2616271972656	2	428.11908	854.223607	1.4136	0.00060518	-1.0604	-0.00045396	0.35323	0.00015122	428.11909934287644	90.93	0.55265	90.863	90.603	91.155	-0.067093					16	13	2	0	0	0	0.4196	1	9520	9520		4.3163	0	1	44699			4044	1466	2677	2680	4600	4600					-0.20933633720005673
DCFSQPGYCS	10	Unmodified	_DCFSQPGYCS_					0	0	0		ENST00000372435.8_1_X:106882629-106882698:+|nuORF	ENST00000372435.8_1_X:106882629-106882698:+|nuORF	ENST00000372435.8_1_X:106882629-106882698:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.7009887695312	2	553.699517	1105.38448	-0.39934	-0.00022112	3.3269	0.0018421	2.9276	0.001621	553.7012476301234	44.972	1.0476	44.941	44.577	45.624	-0.031067					45	23	3	0	0	0	0.86047	1	3602	3602		23.523	1.5628	1	157970			4045	10700	2678	2681	4601	4601					-0.16399582607618868
DCGEWQWSV	9	Unmodified	_DCGEWQWSV_					0	0	0		ENSG00000105894|ENST00000348225|PTN	ENSG00000105894|ENST00000348225|PTN	ENSG00000105894|ENST00000348225|PTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.2222290039062	2	555.221474	1108.42839	0.37021	0.00020555	3.1704	0.0017603	3.5406	0.0019658	555.2232075144943	76.646	0.52357	76.597	76.339	76.863	-0.048264					31	20	3	0	0	0	0.48102	1	7598	7598		52.937	2.9122	1	120400			4046	2263	2679	2682	4602	4602					-0.12148230118987158
DCGEWQWSV	9	Unmodified	_DCGEWQWSV_					0	0	0		ENSG00000105894|ENST00000348225|PTN	ENSG00000105894|ENST00000348225|PTN	ENSG00000105894|ENST00000348225|PTN	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	555.221474	1108.42839	-0.85148	-0.00047276	4.036	0.0022409	3.1845	0.0017681	555.2235183697628	76.842	0.49582	76.891	76.517	77.013	0.049194	0.14872	0.00080225	NaN	52.937	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101980			4047	2263	2679	2682							-0.12148230118987158
DCKIPLFLAFL	11	Unmodified	_DCKIPLFLAFL_					0	0	0		ENSG00000230301|ENST00000615035|OR5H6;nc|ENSG00000230301|Q8NGV6|OR5H6	ENSG00000230301|ENST00000615035|OR5H6	ENSG00000230301|ENST00000615035|OR5H6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3589477539062	2	640.359585	1278.70462	1.5852	0.0010151	-2.8271	-0.0018104	-1.2419	-0.00079525	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.66929	1	10362	10362		36.447	1.2947	1	616450			4048	8729	2680	2683	4603	4603					0.0764124839604392
DCLLIGPQC	9	Unmodified	_DCLLIGPQC_					0	0	0		nc|ENSG00000115221|P18564-2|ITGB6;ENSG00000115221|ENST00000283249|ITGB6	nc|ENSG00000115221|P18564-2|ITGB6	nc|ENSG00000115221|P18564-2|ITGB6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.7867736816406	2	481.227713	960.440874	0.39717	0.00019113	-1.7669	-0.00085028	-1.3697	-0.00065915	481.22667368547246	49.619	0.36588	50.079	49.83	50.196	0.45983					12	8	2	0	0	0	0.20789	1	4832	4832		34.173	8.7224	1	153310			4049	2819	2681	2684	4604	4604					-0.040929099802951896
DCQEGPEVFMN	11	Unmodified	_DCQEGPEVFMN_					0	0	0			REV__ENSG00000143537|ENST00000356955|ADAM15	REV__ENSG00000143537|ENST00000356955|ADAM15	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8925170898438	2	634.749738	1267.48492	1.4952	0.00094906	2.7213	0.0017273	4.2165	0.0026764	634.7501210483392	105.18	0.22293	105.34	105.25	105.47	0.15924					6	5	2	0	0	0	0.17245	1	11190	11190		17.468	0	1	103170	+		4050	19820	2682	2685	4605	4605					-0.13811970344590918
DCSISRVLRR	10	Carbamidomethyl (C)	_DC(Carbamidomethyl (C))SISRVLRR_	DC(1)SISRVLRR		DC(52)SISRVLRR		0	1	0		ENST00000482371.5_1_7:107224374-107269308:+|nuORF	ENST00000482371.5_1_7:107224374-107269308:+|nuORF	ENST00000482371.5_1_7:107224374-107269308:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2306823730469	3	421.231306	1260.67209	-1.0077	-0.00042446	1.452	0.00061162	0.4443	0.00018715	421.23184113292746	42.657	0.61056	43.091	42.725	43.336	0.4334					35	14	3	0	0	0	0.57305	1	3815	3815		51.528	24.48	1	917350			4051	12485	2683	2686	4606	4606	161				0.05217854045736203
DCVTYQTEYRW	11	Unmodified	_DCVTYQTEYRW_					0	0	0		nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1;ENSG00000008710|ENST00000262304|PKD1;ENST00000532415.5_1_16:18477017-18479494:-|nuORF	nc|ENSG00000008710|P98161-2|PKD1;ENST00000532415.5_1_16:18477017-18479494:-|nuORF	nc|ENSG00000008710|P98161-2|PKD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7323913574219	3	488.546848	1462.61871	0.033727	1.6477E-05	-0.12541	-6.127E-05	-0.091687	-4.4793E-05	488.54767163643277	55.407	0.41911	55.808	55.614	56.033	0.40101					20	9	3	0	0	0	0.17606	1	5711	5711		25.126	16.327	1	205890			4052	14737;13377	2684	2687	4607	4607					-0.09408988247423622
DDAGAFYGVT	10	Unmodified	_DDAGAFYGVT_					0	0	0		nc|ENSG00000187079|P28347-2|TEAD1;ENSG00000187079|ENST00000527636|TEAD1	nc|ENSG00000187079|P28347-2|TEAD1	nc|ENSG00000187079|P28347-2|TEAD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2259521484375	2	508.221997	1014.42944	-0.11621	-5.9059E-05	3.2532	0.0016533	3.137	0.0015943	508.22353226508767	27.974	0.70197	27.951	27.606	28.308	-0.023556					25	16	2	0	0	0	0.86218	1	1319	1319		32.812	4.9302	1	43254			4053	7837	2685	2688	4608	4608					-0.0771969247840616
DDAGAFYGVT	10	Unmodified	_DDAGAFYGVT_					0	0	0		nc|ENSG00000187079|P28347-2|TEAD1;ENSG00000187079|ENST00000527636|TEAD1	nc|ENSG00000187079|P28347-2|TEAD1	nc|ENSG00000187079|P28347-2|TEAD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	508.221997	1014.42944	0.47628	0.00024206	2.8932	0.0014704	3.3695	0.0017124	508.22336173140394	27.708	0.45548	27.745	27.476	27.932	0.036858	-0.082826	-0.00020292	NaN	32.812	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30030			4054	7837	2685	2688							-0.0771969247840616
DDAKLRHIIL	10	Unmodified	_DDAKLRHIIL_					0	0	0			REV__nc|ENSG00000124006|O75147-2|OBSL1	REV__nc|ENSG00000124006|O75147-2|OBSL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.8568115234375	2	597.35368	1192.69281	1.5032	0.00089792	2.5027	0.001495	4.0059	0.0023929	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.85939	1	10923	10923		23.042	3.939	1	1501500	+		4055	18552	2686	2689	4609	4609					0.10416767697097384
DDALARPL	8	Unmodified	_DDALARPL_					0	0	0			REV__nc|ENSG00000141556|Q9BTW9-5|TBCD	REV__nc|ENSG00000141556|Q9BTW9-5|TBCD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.78021240234375	2	435.737617	869.460681	-1.5128	-0.00065919	1.1675	0.00050871	-0.34534	-0.00015048	435.7379996348544	39.666	0.8674	40.034	39.643	40.511	0.36797					32	20	2	0	0	0	0.4196	1	3374	3374		26.796	3.7536	1	343440	+		4056	19695	2687	2690	4610	4610					0.020729253463287023
DDCKYECMW	9	Unmodified	_DDCKYECMW_					0	0	0		nc|ENSG00000161395|Q96FM1-2|PGAP3;nc|ENSG00000161395|Q96FM1-3|PGAP3;ENSG00000161395|ENST00000300658|PGAP3;ENST00000309862.10_1_17:37830244-37844267:-|nuORF	nc|ENSG00000161395|Q96FM1-2|PGAP3	nc|ENSG00000161395|Q96FM1-2|PGAP3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.7099609375	2	596.709027	1191.4035	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.599	1	28.635	28.135	29.135	0.03607								0	0	0	0.31437	1	1370	1370		25.574	2.5316	1				4057	5635	2688	2691	4611	4611					-0.18454369308210516
DDDDDCDDDES	11	Unmodified	_DDDDDCDDDES_					0	0	0			REV__ENSG00000189269|ENST00000317749|DRICH1	REV__ENSG00000189269|ENST00000317749|DRICH1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	629.6630859375	2	629.662234	1257.30991	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.753	1	18.125	17.625	18.625	-0.6284								0	0	0	0.56276	1	432	432		2.7184	0.37295	1		+		4058	23074	2689	2692	4612	4612					-0.30844763466598124
DDDDDDSSSE	10	Unmodified	_DDDDDDSSSE_					0	0	0		nc|ENSG00000077782|P11362-21|FGFR1;ENSG00000077782|ENST00000447712|FGFR1;nc|ENSG00000077782|P11362-19|FGFR1;nc|ENSG00000077782|P11362-2|FGFR1;nc|ENSG00000077782|P11362-7|FGFR1;nc|ENSG00000077782|P11362-8|FGFR1;nc|ENSG00000077782|P11362-20|FGFR1;nc|ENSG00000077782|P11362-3|FGFR1;nc|ENSG00000077782|P11362-4|FGFR1;nc|ENSG00000077782|P11362-14|FGFR1;nc|ENSG00000077782|P11362-9|FGFR1;nc|ENSG00000077782|P11362-10|FGFR1;nc|ENSG00000077782|P11362-11|FGFR1;nc|ENSG00000077782|P11362-18|FGFR1;chr8:38457534-38466542|54|22.02|0.22|6.65|-|ENST00000530568|FGFR1,FGFR1;ENST00000496296.5_1_8:38281789-38325791:-|nuORF;nc|ENSG00000077782|P11362-16|FGFR1;ENST00000470826.5_1_8:38281789-38325791:-|nuORF;ENST00000474970.1_1_8:38285813-38287302:-|nuORF;ENST00000526570.5_1_8:38285813-38285975:-|nuORF	nc|ENSG00000077782|P11362-21|FGFR1	nc|ENSG00000077782|P11362-21|FGFR1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.0560302734375	2	550.162727	1098.3109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.114	1	69.242	68.742	69.742	0.12838								0	0	0	0.45132	1	6245	6245		20.947	6.2828	1				4059	1386	2690	2693	4613	4613					-0.23432181035377653
DDDDDSDDQGD	11	Unmodified	_DDDDDSDDQGD_					0	0	0		nc|ENSG00000226266|Q9UIF8-4|BAZ2B;nc|ENSG00000226266|Q9UIF8-2|BAZ2B;nc|ENSG00000226266|Q9UIF8-5|BAZ2B;nc|ENSG00000226266|Q9UIF8-3|BAZ2B;ENSG00000123636|ENST00000392783|BAZ2B	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.1737060546875	2	606.176366	1210.33818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.533	1	33.535	33.035	34.035	0.0026054								0	0	0	0.56276	1	1982	1982		7.8045	0.61117	1				4060	3286	2691	2694	4614	4614					-0.2585769749503015
DDDDFETNQ	9	Unmodified	_DDDDFETNQ_					0	0	0		ENSG00000142959|ENST00000372207|BEST4	ENSG00000142959|ENST00000372207|BEST4	ENSG00000142959|ENST00000372207|BEST4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.6939086914062	2	549.69654	1097.37853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.845	1	44.776	44.276	45.276	-0.068634								0	0	0	0.31117	1	3186	3186		26.693	8.4308	1				4061	4592	2692	2695	4615	4615					-0.16626686313952632
DDDGDGDD	8	Unmodified	_DDDGDGDD_					0	0	0		nc|ENSG00000130939|O95155-4|UBE4B	nc|ENSG00000130939|O95155-4|UBE4B	nc|ENSG00000130939|O95155-4|UBE4B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.1759338378906	2	412.114852	822.21515	0.30074	0.00012394	-3.6372	-0.0014989	-3.3364	-0.001375	412.11344155548585	95.108	0.55021	95.528	95.274	95.824	0.41963					26	13	3	0	0	0	0.4196	1	11378	11378		1.2052	0	1	370250			4062	14910	2693	2696	4616	4616					-0.20306864364977173
DDDIAALVVD	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DDDIAALVVD_					1	0	0		ENSG00000075624|ENST00000646664|ACTB;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.260986328125	2	544.261319	1086.50808	1.2744	0.00069359	-1.0797	-0.00058763	0.1947	0.00010597	544.260431236819	105.36	0.63087	105.52	105.27	105.9	0.15583					29	15	3	0	0	0	0.64457	1	12838	12838		47.657	17.154	1	234730			4063	1338;12043	2694	2697	4617	4617					-0.03170884963969911
DDDMDENSM	9	Unmodified	_DDDMDENSM_					0	0	0		nc|ENSG00000256463|Q9BXA9-3|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3;nc|ENSG00000256463|Q9BXA9-2|SALL3;ENSG00000256463|ENST00000537592|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	536.1663208007812	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.897	1	83.897	83.397	84.397	0								0	0	0	0.36247	1	7888	7888		10.866	0	1				4064	8897	2695	2698	4618	4618					-0.21549077329086685
DDDSMNEMD	9	Unmodified	_DDDSMNEMD_					0	0	0			REV__nc|ENSG00000065150|O00410-2|IPO5	REV__nc|ENSG00000065150|O00410-2|IPO5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.1635131835938	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.084	1	57.056	56.556	57.556	-0.02866								0	0	0	0.32758	1	5251	5251		20.947	4.242	1		+		4065	16492	2696	2699	4619	4619					-0.21549077329086685
DDDSMNEMD	9	Unmodified	_DDDSMNEMD_					0	0	0			REV__nc|ENSG00000065150|O00410-2|IPO5	REV__nc|ENSG00000065150|O00410-2|IPO5	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1669921875	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.464	1	22.513	22.013	23.013	0.048553								0	0	0	0.34024	1	670	670		17.365	5.8539	1		+		4066	16492	2696	2699	4620	4620					-0.21549077329086685
DDDSMNEMD	9	Unmodified	_DDDSMNEMD_					0	0	0			REV__nc|ENSG00000065150|O00410-2|IPO5	REV__nc|ENSG00000065150|O00410-2|IPO5	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1636962890625	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.666	1	71.798	71.298	72.298	0.13145								0	0	0	0.32758	1	6532	6532		20.947	8.7401	1		+		4067	16492	2696	2699	4621	4621					-0.21549077329086685
DDESDYDDMD	10	Unmodified	_DDESDYDDMD_					0	0	0			REV__ENST00000490957.5_1_7:11013950-11101713:+|nuORF	REV__ENST00000490957.5_1_7:11013950-11101713:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	610.1849975585938	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.937	1	26.043	25.543	26.543	0.1054								0	0	0	0.45132	1	966	966		10.866	0.6003	1		+		4068	17613	2697	2700	4622	4622					-0.24978377356342207
DDETCRNGYKP	11	Unmodified	_DDETCRNGYKP_					0	0	0		nc|ENSG00000005483|Q8IZD2-5|KMT2E;nc|ENSG00000005483|Q8IZD2-8|KMT2E;nc|ENSG00000005483|Q8IZD2-6|KMT2E;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000005483|Q8IZD2-7|KMT2E;ENSG00000005483|ENST00000311117|KMT2E	nc|ENSG00000005483|Q8IZD2-5|KMT2E	nc|ENSG00000005483|Q8IZD2-5|KMT2E	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7713928222656	3	433.187431	1296.54046	-0.025023	-1.084E-05	2.602	0.0011271	2.5769	0.0011163	433.18861299106214	32.727	0.46983	32.854	32.59	33.06	0.12642					14	10	2	0	0	0	0.16358	1	2301	2301		33.039	3.4886	1	43270			4069	14732	2698	2701	4623	4623					-0.09594420832627293
DDEYSDDDDM	10	Unmodified	_DDEYSDDDDM_					0	0	0		ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1;nc|ENSG00000111530|Q86VP6-3|CAND1	ENSG00000111530|ENST00000545606|CAND1	ENSG00000111530|ENST00000545606|CAND1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	610.181884765625	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.04	1	114.96	114.46	115.46	-0.072342								0	0	0	0.45132	1	12420	12420		10.866	4.5529	1				4070	2583	2699	2702	4624	4624					-0.24978377356342207
DDGALRKRC	9	Unmodified	_DDGALRKRC_					0	0	0		ENSG00000184163|ENST00000330388|C1QTNF12	ENSG00000184163|ENST00000330388|C1QTNF12	ENSG00000184163|ENST00000330388|C1QTNF12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2637939453125	2	517.264007	1032.51346	0.52386	0.00027097	-2.4274	-0.0012556	-1.9036	-0.00098464	517.2633068603601	77.898	1.2034	78.303	77.763	78.967	0.4053					88	28	5	0	0	0	0.67345	1	8890	8890		42.396	3.1433	1	1429900			4071	7584	2700	2703	4625	4625					-0.0014943986250273156
DDGGEDSDDE	10	Unmodified	_DDGGEDSDDE_					0	0	0			REV__ENSG00000115267|ENST00000649979|IFIH1	REV__ENSG00000115267|ENST00000649979|IFIH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.1593627929688	2	527.159987	1052.30542	0.23584	0.00012432	-4.1218	-0.0021729	-3.886	-0.0020485	527.1577876875921	31.482	1.24	31.5	30.879	32.119	0.01836					56	30	2	0	0	0	0.85438	1	1724	1724		16.473	0.83134	1	82396	+		4072	18101	2701	2704	4626	4626					-0.2186385982720367
DDGRDCSC	8	Unmodified	_DDGRDCSC_					0	0	0		nc|ENSG00000168615|Q13443-2|ADAM9;ENSG00000168615|ENST00000487273|ADAM9	nc|ENSG00000168615|Q13443-2|ADAM9	nc|ENSG00000168615|Q13443-2|ADAM9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3001403808594	2	435.639459	869.264366	-0.44824	-0.00019527	-0.75906	-0.00033068	-1.2073	-0.00052595	435.63904788652496	74.835	0.61977	75.226	74.993	75.612	0.3911					21	14	2	0	0	0	0.4196	1	8417	8417		12.959	0	1	183650			4073	6418	2702	2705	4627	4627					-0.17549570881385534
DDIDGIQAI	9	Unmodified	_DDIDGIQAI_					0	0	0		ENSG00000196611|ENST00000315274|MMP1;ENST00000528662.6_1_11:102584081-102593757:-|nuORF;ENSG00000118113|ENST00000236826|MMP8	ENSG00000196611|ENST00000315274|MMP1	ENSG00000196611|ENST00000315274|MMP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.23748779296875	2	480.237647	958.460741	0.33199	0.00015943	-0.6108	-0.00029333	-0.27881	-0.00013389	480.23727660675127	52.385	0.82967	52.809	52.596	53.426	0.42348					35	19	2	0	0	0	0.15928	1	5240	5240		82.305	5.5309	1	955710			4074	8081	2703	2706	4628	4628					-0.020151194443315035
DDIGHGVKVD	10	Unmodified	_DDIGHGVKVD_					0	0	0		chr2:203380384-203383243|31|17.58|0.82|4.42|+|0|ABI2,None|1	chr2:203380384-203383243|31|17.58|0.82|4.42|+|0|ABI2,None|1	chr2:203380384-203383243|31|17.58|0.82|4.42|+|0|ABI2,None|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.779541015625	2	527.76182	1053.50909	-0.31788	-0.00016777	3.9684	0.0020944	3.6505	0.0019266	527.7638435667433	60.062	0.48377	60.452	60.055	60.538	0.39077					16	12	2	0	0	0	0.37624	1	6324	6324		36.447	0	1	216260			4075	325	2704	2707	4629	4629					-0.015526258044246788
DDIIEALRTR	10	Unmodified	_DDIIEALRTR_					0	0	0			REV__nc|ENSG00000124496|Q96PN7-3|TRERF1	REV__nc|ENSG00000124496|Q96PN7-3|TRERF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.8577270507812	2	601.330402	1200.64625	1.0008	0.00060182	2.4632	0.0014812	3.464	0.002083	601.3317009678069	103.18	1.1104	103.37	103.08	104.19	0.18298					35	27	2	0	0	0	0.37624	1	10882	10882		42.864	5.0528	1	439260	+		4076	18591	2705	2708	4630	4630					0.05395283075131374
DDINNVGLRG	10	Unmodified	_DDINNVGLRG_					0	0	0		ENSG00000157379|ENST00000288111|DHRS1;ENST00000561273.5_1_14:24761833-24768312:-|nuORF	ENSG00000157379|ENST00000288111|DHRS1	ENSG00000157379|ENST00000288111|DHRS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7711181640625	2	536.772719	1071.53089	-0.4637	-0.0002489	-2.6385	-0.0014163	-3.1022	-0.0016652	536.7711509744508	70.637	0.75162	71.021	70.668	71.419	0.38416					27	17	2	0	0	0	0.35939	1	7831	7831		67.494	7.1997	1	430810			4077	5425	2706	2709	4631	4631					-0.002018210558617284
DDLDVPLDL	9	Unmodified	_DDLDVPLDL_					0	0	0			REV__ENSG00000171951|ENST00000305409|SCG2	REV__ENSG00000171951|ENST00000305409|SCG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.75323486328125	2	507.75313	1013.49171	0.84789	0.00043052	-0.76332	-0.00038758	0.084565	4.2938E-05	507.7524998605722	62.525	1.3198	63.08	62.559	63.879	0.55449					81	30	4	0	0	0	0.35373	1	6740	6740		60.972	8.6728	1	1695100	+		4078	21790	2707	2710	4632	4632					-0.014499661300874322
DDLIGRAD	8	Unmodified	_DDLIGRAD_					0	0	0		nc|ENSG00000113649|O14776-2|TCERG1;nc|ENSG00000113649|O14776|TCERG1;ENSG00000113649|ENST00000679501|TCERG1;ENST00000507175.5_1_5:145826912-145859658:+|nuORF	nc|ENSG00000113649|O14776-2|TCERG1	nc|ENSG00000113649|O14776-2|TCERG1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7723693847656	2	437.716882	873.41921	1.6876	0.0007387	-2.4891	-0.0010895	-0.80145	-0.00035081	437.7160499269284	27.625	0.53328	27.602	27.347	27.881	-0.023556					22	12	2	0	0	0	0.4196	1	1260	1260		11.511	0	1	25962			4079	2737	2708	2711	4633	4633					-0.022562554130104218
DDLLTVLFQW	10	Unmodified	_DDLLTVLFQW_					0	0	0			REV__ENSG00000244405|ENST00000306376|ETV5	REV__ENSG00000244405|ENST00000306376|ETV5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	624.3336791992188	2	625.326796	1248.63904	-0.26308	-0.00016451	-3.2906	-0.0020577	-3.5537	-0.0022222	625.828212682567	63.722	0.21667	64.109	64.004	64.221	0.3868					6	4	2	0	0	0	0.37624	1	6868	6868		37.812	0	1	147110	+		4080	23849	2709	2712	4634	4634					0.02466550474696305
DDLSKIPVGDL	11	Unmodified	_DDLSKIPVGDL_					0	0	0			REV__nc|ENSG00000163714|O15042-3|U2SURP	REV__nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.3134155273438	2	586.313886	1170.61322	-0.85676	-0.00050233	0.45939	0.00026934	-0.39737	-0.00023299	586.3144173087796	85.346	0.89909	85.785	85.464	86.363	0.43967					39	21	2	0	0	0	0.43778	1	9988	9988		56.434	0.92959	1	1035900	+		4081	29986	2710	2713	4635	4635					0.034736562324496845
DDLVAPRALK	10	Unmodified	_DDLVAPRALK_					0	0	0			REV__nc|ENSG00000019991|P14210-3|HGF	REV__nc|ENSG00000019991|P14210-3|HGF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.3192138671875	2	549.319306	1096.62406	-0.48303	-0.00026534	-2.2746	-0.0012495	-2.7576	-0.0015148	549.3179926126767	101.27	2.2263	101.27	100.73	102.96	0					128	54	4	0	0	0	0.8651	1	10331	10331		25.574	0.12388	1	1196600	+		4082	16231	2711	2714	4636	4636					0.07961103397360603
DDLVWSPLQ	9	Unmodified	_DDLVWSPLQ_					0	0	0			REV__ENSG00000134070|ENST00000256458|IRAK2	REV__ENSG00000134070|ENST00000256458|IRAK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7706298828125	2	536.769114	1071.52368	-0.55748	-0.00029924	4.3099	0.0023134	3.7524	0.0020142	536.7712654963615	70.523	0.64537	71.07	70.762	71.408	0.54756					26	15	2	0	0	0	0.28163	1	7859	7859		66.429	6.311	1	550880	+		4083	19114	2712	2715	4637	4637					-0.00922553656278069
DDMAGFSGREA	11	Unmodified	_DDMAGFSGREA_					0	0	0			REV__nc|ENSG00000127527|Q9UBC2-3|EPS15L1	REV__nc|ENSG00000127527|Q9UBC2-3|EPS15L1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.303955078125	2	578.240395	1154.46624	-0.84894	-0.00049089	1.605	0.00092809	0.75608	0.0004372	578.2412292463216	51.471	0.48143	51.469	51.22	51.701	-0.0020447					16	10	2	0	0	0	0.17376	1	4436	4436		32.751	0	1	57029	+		4084	18738	2713	2716	4638	4638					-0.10481763924144616
DDPCFLPK	8	Unmodified	_DDPCFLPK_					0	0	0		nc|ENSG00000183230|Q9UI47-2|CTNNA3;ENSG00000183230|ENST00000433211|CTNNA3	nc|ENSG00000183230|Q9UI47-2|CTNNA3	nc|ENSG00000183230|Q9UI47-2|CTNNA3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.2341613769531	2	467.720578	933.426604	-0.26284	-0.00012294	4.3429	0.0020313	4.08	0.0019083	467.7226582668662	30.526	0.54484	30.479	30.181	30.726	-0.047062					21	13	2	0	0	0	0.4196	1	1681	1681		30.504	8.5438	1	25430			4085	7510	2714	2717	4639	4639					-0.04277239136922617
DDPCFLPK	8	Unmodified	_DDPCFLPK_					0	0	0		nc|ENSG00000183230|Q9UI47-2|CTNNA3;ENSG00000183230|ENST00000433211|CTNNA3	nc|ENSG00000183230|Q9UI47-2|CTNNA3	nc|ENSG00000183230|Q9UI47-2|CTNNA3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	467.720578	933.426604	-0.28218	-0.00013198	4.6614	0.0021802	4.3792	0.0020483	467.7226923444269	30.569	0.53299	30.559	30.244	30.777	-0.010656	0.034166	-0.0041537	NaN	30.504	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23651			4086	7510	2714	2717							-0.04277239136922617
DDPCFLPK	8	Unmodified	_DDPCFLPK_					0	0	0		nc|ENSG00000183230|Q9UI47-2|CTNNA3;ENSG00000183230|ENST00000433211|CTNNA3	nc|ENSG00000183230|Q9UI47-2|CTNNA3	nc|ENSG00000183230|Q9UI47-2|CTNNA3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	467.720578	933.426604	-0.33075	-0.0001547	10.393	0.0048609	10.062	0.0047062	467.7232483247974	30.532	0.13167	30.536	30.448	30.579	0.0037212	0.011203	0.0012076	NaN	30.504	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15993			4087	7510	2714	2717							-0.04277239136922617
DDPLLEFAE	9	Unmodified	_DDPLLEFAE_					0	0	0			REV__nc|ENSG00000012817|Q9BY66-2|KDM5D;REV__nc|ENSG00000126012|P41229-2|KDM5C	REV__nc|ENSG00000126012|P41229-2|KDM5C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7545776367188	2	524.745305	1047.47606	-0.30646	-0.00016081	-3.3766	-0.0017719	-3.6831	-0.0019327	524.7432675990273	46.781	0.83652	47.253	47.021	47.857	0.47139					28	19	3	0	0	0	0.20789	1	4419	4419		10.265	0	1	952180	+		4088	18692;16191	2715	2718	4640	4640					-0.0457825264713847
DDPLLEFAE	9	Unmodified	_DDPLLEFAE_					0	0	0			REV__nc|ENSG00000012817|Q9BY66-2|KDM5D;REV__nc|ENSG00000126012|P41229-2|KDM5C	REV__nc|ENSG00000126012|P41229-2|KDM5C	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	524.745305	1047.47606	-0.74349	-0.00039014	-3.854	-0.0020224	-4.5975	-0.0024125	524.743103945542	46.529	0.6801	47.452	47.191	47.871	0.92315	0.099743	-0.00039863	NaN	10.265	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	660880	+		4089	18692;16191	2715	2718							-0.0457825264713847
DDPLTTATK	9	Unmodified	_DDPLTTATK_					0	0	0			REV__ENSG00000136770|ENST00000376980|DNAJC1	REV__ENSG00000136770|ENST00000376980|DNAJC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.2456970214844	2	481.245472	960.476391	-1.9639	-0.00094514	2.3227	0.0011178	0.35876	0.00017265	481.2464659109781	24.432	0.7729	24.432	24.034	24.807	0					53	33	3	0	0	0	0.69624	1	817	817		40.778	5.1599	1	66817	+		4090	19333	2716	2719	4641	4641					-0.005428329272831434
DDQSGSVVIF	10	Unmodified	_DDQSGSVVIF_					0	0	0		ENSG00000229859|ENST00000325558|PGA3;ENSG00000229183|ENST00000378149|PGA4	ENSG00000229859|ENST00000325558|PGA3	ENSG00000229859|ENST00000325558|PGA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.2376708984375	2	533.756204	1065.49785	1.2671	0.00067632	-1.3733	-0.00073301	-0.1062	-5.6687E-05	533.7550181519043	35.89	0.37702	36.331	36.074	36.451	0.44043					18	9	3	0	0	0	0.37624	1	2758	2758		34.173	5.023	1	490410			4091	8725	2717	2720	4642	4642					-0.03227447898552782
DDSLSWTSCD	10	Unmodified	_DDSLSWTSCD_					0	0	0		nc|ENSG00000267508|Q96NJ3-2|ZNF285;ENSG00000267508|ENST00000614994|ZNF285	nc|ENSG00000267508|Q96NJ3-2|ZNF285	nc|ENSG00000267508|Q96NJ3-2|ZNF285	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	564.6542358398438	2	564.711136	1127.40772	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.806	1	66.932	66.432	67.432	0.12649								0	0	0	0.45132	1	5950	5950		25.574	2.0514	1				4092	8957	2718	2721	4643	4643					-0.15088865289294517
DDSSICYEKDG	11	Unmodified	_DDSSICYEKDG_					0	0	0			REV__nc|ENSG00000198431|Q16881-3|TXNRD1	REV__nc|ENSG00000198431|Q16881-3|TXNRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	616.2417602539062	2	616.2428	1230.47105	0.74853	0.00046128	-1.9034	-0.0011729	-1.1548	-0.00071166	616.2417797697477	17.774	0.22597	17.85	17.742	17.968	0.075443					14	6	3	0	0	0	0.66929	1	220	220		36.447	4.4919	1	72945	+		4093	30148	2719	2722	4644	4644					-0.13496924572086755
DDTGCWDMN	9	Unmodified	_DDTGCWDMN_					0	0	0		nc|ENSG00000078549|P41586-5|ADCYAP1R1;nc|ENSG00000078549|P41586-3|ADCYAP1R1;ENSG00000078549|ENST00000304166|ADCYAP1R1;nc|ENSG00000078549|P41586-4|ADCYAP1R1;nc|ENSG00000078549|P41586-2|ADCYAP1R1	nc|ENSG00000078549|P41586-5|ADCYAP1R1	nc|ENSG00000078549|P41586-5|ADCYAP1R1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.3854370117188	2	528.673499	1055.33245	0.16399	8.6695E-05	1.9915	0.0010529	2.1555	0.0011396	528.674366074465	26.887	0.4244	26.996	26.753	27.178	0.10901					29	19	2	0	0	0	0.20789	1	1039	1039		24.203	10.749	1	39901			4094	1401	2720	2723	4645	4645					-0.19300746021372106
DDTGCWDMN	9	Unmodified	_DDTGCWDMN_					0	0	0		nc|ENSG00000078549|P41586-5|ADCYAP1R1;nc|ENSG00000078549|P41586-3|ADCYAP1R1;ENSG00000078549|ENST00000304166|ADCYAP1R1;nc|ENSG00000078549|P41586-4|ADCYAP1R1;nc|ENSG00000078549|P41586-2|ADCYAP1R1	nc|ENSG00000078549|P41586-5|ADCYAP1R1	nc|ENSG00000078549|P41586-5|ADCYAP1R1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	528.673499	1055.33245	-0.20904	-0.00011051	-1.496	-0.0007909	-1.705	-0.00090141	528.6713694255501	27.216	0.12589	27.285	27.183	27.309	0.06868	0.14439	-0.0024042	NaN	24.203	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28302			4095	1401	2720	2723							-0.19300746021372106
DDTGPDKAGNR	11	Unmodified	_DDTGPDKAGNR_					0	0	0		ENST00000319023.6_1_11:71175173-71184379:+|nuORF	ENST00000319023.6_1_11:71175173-71184379:+|nuORF	ENST00000319023.6_1_11:71175173-71184379:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.260009765625	2	573.262716	1144.51088	-0.72002	-0.00041276	-2.5355	-0.0014535	-3.2555	-0.0018662	573.2610107147898	36.931	0.48856	36.877	36.649	37.137	-0.053558					26	10	3	0	0	0	0.61369	1	2490	2490		42.864	1.4377	1	157170			4096	10014	2721	2724	4646	4646					-0.05559616786467814
DDVDKLKE	8	Unmodified	_DDVDKLKE_					0	0	0		ENSG00000152193|ENST00000282003|OBI1	ENSG00000152193|ENST00000282003|OBI1	ENSG00000152193|ENST00000282003|OBI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.24346923828125	2	481.245472	960.476391	-1.9639	-0.00094514	2.3227	0.0011178	0.35876	0.00017265	481.2464659109781	24.432	0.7729	24.432	24.034	24.807	0					53	33	3	0	0	0	0.9283	1	831	831		49.442	7.0454	1	66817			4097	5159	2722	2725	4647	4647					-0.005428329272717747
DDVNHISLI	9	Unmodified	_DDVNHISLI_					0	0	0		nc|ENSG00000172139|Q4G0N8-2|SLC9C1;ENSG00000172139|ENST00000305815|SLC9C1	nc|ENSG00000172139|Q4G0N8-2|SLC9C1	nc|ENSG00000172139|Q4G0N8-2|SLC9C1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.2664184570312	2	513.266739	1024.51892	0.46405	0.00023818	-1.0453	-0.00053651	-0.58124	-0.00029833	513.2660016412625	50.87	0.66415	51.305	50.994	51.659	0.43505					24	15	2	0	0	0	0.38563	1	5042	5042		58.782	14.665	1	448560			4098	6745	2723	2726	4648	4648					0.0076456220097043115
DDVPSAAPQL	10	Unmodified	_DDVPSAAPQL_					0	0	0		ENSG00000103742|ENST00000352385|IGDCC4;ENST00000559327.1_1_15:65676349-65688574:-|nuORF;nc|ENSG00000103742|Q8TDY8-2|IGDCC4	ENSG00000103742|ENST00000352385|IGDCC4	ENSG00000103742|ENST00000352385|IGDCC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.7528991699219	2	506.750921	1011.48729	0.83502	0.00042315	-1.3137	-0.00066571	-0.47865	-0.00024256	506.7501621718062	52.428	0.82746	53.096	52.881	53.708	0.66729					28	19	2	0	0	0	0.76096	1	5277	5277		41.427	0.64845	1	384550			4099	2100	2724	2727	4649	4649					-0.017994305530010024
DDVRDNIL	8	Unmodified	_DDVRDNIL_					0	0	0		nc|ENSG00000170558|P19022-2|CDH2;ENSG00000170558|ENST00000269141|CDH2;nc|ENSG00000179242|P55283-2|CDH4;ENSG00000179242|ENST00000614565|CDH4	nc|ENSG00000170558|P19022-2|CDH2;nc|ENSG00000179242|P55283-2|CDH4	nc|ENSG00000170558|P19022-2|CDH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.24261474609375	2	480.243264	958.471974	-0.26606	-0.00012778	-0.2399	-0.00011521	-0.50597	-0.00024299	480.24316227273624	32.835	0.74734	32.78	32.401	33.148	-0.05434					33	17	3	0	0	0	0.91977	1	1970	1970		45.952	0	1	181300			4100	6601;7258	2725	2728	4650	4650					-0.008922973501853448
DDYERQDHK	9	Unmodified	_DDYERQDHK_					0	0	0			REV__ENSG00000180611|ENST00000392452|MB21D2	REV__ENSG00000180611|ENST00000392452|MB21D2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	603.2589721679688	2	603.262716	1204.51088	-0.56841	-0.0003429	0.5883	0.0003549	0.019896	1.2002E-05	603.2629982026436	26.081	2.5205	26.049	25.031	27.552	-0.032125					87	66	2	0	0	0	0.78124	1	1092	1092		30.318	4.7437	1	26577	+		4101	22403	2726	2729	4651	4651					-0.08319616786502593
DDYKEICS	8	Unmodified	_DDYKEICS_					0	0	0		ENSG00000249437|ENST00000517649|NAIP;ENST00000512908.2_1_5:70398727-70422449:-|nuORF;ENST00000315147.8_1_5:70265933-70281744:-|nuORF;ENST00000511830.2_1_5:69390488-69422514:-|nuORF;nc|ENSG00000249437|Q13075-2|NAIP	ENSG00000249437|ENST00000517649|NAIP	ENSG00000249437|ENST00000517649|NAIP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.2669982910156	2	486.702583	971.390612	-0.55193	-0.00026863	-3.2269	-0.0015706	-3.7789	-0.0018392	486.7011412307227	85.709	0.54156	86.157	85.945	86.486	0.44736					20	12	2	0	0	0	0.4196	1	10055	10055		24.203	0	1	85934			4102	8837	2727	2730	4652	4652					-0.0962274110445378
DDYSPTVTYY	10	Unmodified	_DDYSPTVTYY_					0	0	0			REV__ENSG00000118292|ENST00000369099|C1orf54	REV__ENSG00000118292|ENST00000369099|C1orf54	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	612.3349609375	2	612.258776	1222.503	0.35336	0.00021635	-3.2688	-0.0020013	-2.9154	-0.001785	612.2564536575558	52.753	0.66167	53.177	52.97	53.632	0.42348					31	15	4	0	0	0	0.37624	1	5333	5333		26.693	9.9755	1	415080	+		4103	18301	2728	2731	4653	4653					-0.09935188826580088
DEAAKLFQAV	10	Unmodified	_DEAAKLFQAV_					0	0	0			REV__ENST00000533863.1_2_11:117074025-117074655:+|nuORF	REV__ENST00000533863.1_2_11:117074025-117074655:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.2883911132812	2	546.290214	1090.56587	-0.3732	-0.00020388	0.21184	0.00011572	-0.16137	-8.8154E-05	546.290162777225	62.855	0.44324	62.85	62.615	63.058	-0.0055504					31	17	2	0	0	0	0.67571	1	5833	5833		45.972	3.108	1	95199	+		4104	20183	2729	2732	4654	4654					0.02421421752092101
DEAGPLSK	8	Unmodified	_DEAGPLSK_					0	0	0			REV__ENSG00000170275|ENST00000320954|CRTAP	REV__ENSG00000170275|ENST00000320954|CRTAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.70947265625	2	408.708525	815.402498	1.4661	0.00059922	0.8827	0.00036077	2.3488	0.00095999	408.708811250267	16.833	0.25226	16.346	16.236	16.488	-0.48718					8	5	2	0	0	0	0.90523	1	185	185		40.778	1.972	1	137760	+		4105	21644	2730	2733	4655	4655					-0.012587562989438084
DEALSTRPS	9	Unmodified	_DEALSTRPS_					0	0	0			REV__nc|ENSG00000101096|Q13469-5|NFATC2	REV__nc|ENSG00000101096|Q13469-5|NFATC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	488.2384033203125	2	488.240721	974.466889	-0.74489	-0.00036368	-3.5832	-0.0017495	-4.3281	-0.0021132	488.2389720091914	60.599	0.73972	60.7	60.395	61.135	0.10082					93	32	4	0	0	0	0.76255	1	5244	5244		35.618	0.41757	1	1383100	+		4106	15780	2731	2734	4656	4656					-0.021366012127941758
DEASQEESS	9	Unmodified	_DEASQEESS_					0	0	0			REV__nc|ENSG00000182872|P98175-2|RBM10	REV__nc|ENSG00000182872|P98175-2|RBM10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.1839599609375	2	491.185808	980.357064	0.55334	0.00027179	-1.3772	-0.00067646	-0.82386	-0.00040467	491.18514969245695	73.95	0.81865	74.081	73.85	74.669	0.13126					71	31	3	0	0	0	0.7932	1	6807	6807		24.203	0	1	196840	+		4107	22558	2732	2735	4657	4657					-0.13390071342632837
DECANGHHDCN	11	Unmodified	_DECANGHHDCN_					0	0	0		ENSG00000105429|ENST00000251268|MEGF8;nc|ENSG00000105429|Q7Z7M0-2|MEGF8	ENSG00000105429|ENST00000251268|MEGF8	ENSG00000105429|ENST00000251268|MEGF8	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	607.6961059570312	2	607.701111	1213.38767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.157	1	62.173	61.673	62.673	0.015724								0	0	0	0.56276	1	5420	5420		24.232	8.5956	1				4108	2217	2733	2736	4658	4658					-0.21048939500883534
DECHSADP	8	Unmodified	_DECHSADP_					0	0	0			REV__nc|ENSG00000170776|Q12802-4|AKAP13	REV__nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.1562805175781	2	437.1558	872.297046	0.10397	4.545E-05	1.3356	0.00058386	1.4396	0.00062931	437.15629753172794	31.525	1.0115	31.544	31.044	32.055	0.018362					43	23	2	0	0	0	0.80706	1	1706	1706		19.36	4.6959	1	58925	+		4109	21686	2734	2737	4659	4659					-0.14421040486888614
DEDDDDDEDED	11	Unmodified	_DEDDDDDEDED_					0	0	0			REV__ENST00000461347.5_1_2:232323706-232327997:-|nuORF	REV__ENST00000461347.5_1_2:232323706-232327997:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7900085449219	3	442.791906	1325.35389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.613	1	76.008	75.508	76.508	0.39507								0	0	0	0.56276	1	8557	8557		3.026	0	1		+		4110	18082	2735	2738	4660	4660					-0.29577455768639993
DEDDDDDGSEM	11	Unmodified	_DEDDDDDGSEM_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	414.7616271972656	3	414.791072	1241.35139	0.62094	0.00025756	1.5893	0.00065921	2.2102	0.00091677	414.7907399685638	88.153	0.32065	88.304	88.242	88.563	0.15055					10	7	2	0	0	0	0.17606	1	8767	8767		19.263	7.6268	1	22835			4111	1560	2736	2739	4661	4661					-0.25963582707277055
DEDDGASRIF	10	Unmodified	_DEDDGASRIF_					0	0	0		ENSG00000118160|ENST00000236877|SLC8A2	ENSG00000118160|ENST00000236877|SLC8A2	ENSG00000118160|ENST00000236877|SLC8A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.7453002929688	2	562.746367	1123.47818	-0.38529	-0.00021682	-2.6006	-0.0014635	-2.9859	-0.0016803	562.744783142017	45.226	2.0107	46.122	45.235	47.246	0.89542					91	49	2	0	0	0	0.33399	1	4191	4191		69.628	18.435	1	597700			4112	3013	2737	2740	4662	4662					-0.07861823909320265
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	610.18701171875	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.854	1	24.868	24.368	25.368	0.013996								0	0	0	0.45132	1	872	872		10.265	0.5596	1				4113	933	2738	2741	4663	4663					-0.2497837735631947
DEDDYDGEEY	10	Unmodified	_DEDDYDGEEY_					0	0	0		ENST00000435954.2_1_6:54350144-54350642:-|nuORF	ENST00000435954.2_1_6:54350144-54350642:-|nuORF	ENST00000435954.2_1_6:54350144-54350642:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	624.8549194335938	2	625.204395	1248.39424	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.722	1	65.722	65.222	66.222	0								0	0	0	0.45132	1	5804	5804		34.173	18.531	1				4114	11717	2739	2742	4664	4664					-0.22002444587519676
DEDFMKGQY	9	Oxidation (M)	_DEDFM(Oxidation (M))KGQY_		DEDFM(1)KGQY		DEDFM(79)KGQY	0	0	1			REV__ENST00000568218.2_1_15:32605934-32606516:-|nuORF	REV__ENST00000568218.2_1_15:32605934-32606516:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.7427978515625	2	574.731871	1147.44919	-0.52652	-0.00030261	-0.070987	-4.0798E-05	-0.59751	-0.00034341	574.7316291882688	48.929	0.48412	48.903	48.661	49.146	-0.025112					17	10	2	0	0	0	0.17307	1	4168	4168		79.451	13.648	1	131390	+		4115	17108	2740	2743	4665	4665		247			-0.11863684529953389
DEDGDDGDDT	10	Unmodified	_DEDGDDGDDT_					0	0	0		ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5;ENST00000518145.1_1_8:103358389-103359193:-|nuORF	ENSG00000104517|ENST00000520539|UBR5	ENSG00000104517|ENST00000520539|UBR5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.569091796875	2	527.159987	1052.30542	0.27127	0.000143	-4.1554	-0.0021906	-3.8841	-0.0020476	527.1576314529859	32.296	1.0577	32.29	31.764	32.822	-0.0061455					62	24	3	0	0	0	0.37624	1	1759	1759		2.7184	0	1	108410			4116	2136	2741	2744	4666	4666					-0.2186385982720367
DEDNTDDEEET	11	Unmodified	_DEDNTDDEEET_					0	0	0			REV__nc|ENSG00000069020|O15021-2|MAST4	REV__nc|ENSG00000069020|O15021-2|MAST4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2633361816406	3	437.816274	1310.42699	0.055905	2.4476E-05	1.6806	0.00073579	1.7365	0.00076027	437.8186256373677	35.418	0.1715	35.36	35.286	35.457	-0.05769					5	4	2	0	0	0	0.17375	1	1858	1858		9.2118	0	1	28299	+		4117	16574	2742	2745	4667	4667					-0.21580282255354177
DEDQVRARI	9	Unmodified	_DEDQVRARI_					0	0	0		ENSG00000136931|ENST00000373588|NR5A1	ENSG00000136931|ENST00000373588|NR5A1	ENSG00000136931|ENST00000373588|NR5A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.2816772460938	2	551.285994	1100.55744	-0.64318	-0.00035458	-2.6635	-0.0014684	-3.3067	-0.0018229	551.2844574783772	60.788	1.1006	60.775	60.038	61.139	-0.012203					50	33	2	0	0	0	0.51307	1	5641	5641		51.335	5.3632	1	132100			4118	4159	2743	2746	4668	4668					0.011178678354781368
DEEAEQERLSC	11	Unmodified	_DEEAEQERLSC_					0	0	0		ENSG00000188994|ENST00000369577|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.3884582519531	3	436.850596	1307.52996	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.8	1	113.73	113.23	114.23	-0.067215								0	0	0	0.56276	1	12328	12328		26.75	5.9126	1				4119	7979	2744	2747	4669	4669					-0.11150448277703617
DEEDKLTEM	9	Oxidation (M)	_DEEDKLTEM(Oxidation (M))_		DEEDKLTEM(1)		DEEDKLTEM(49)	0	0	1			REV__ENSG00000198286|ENST00000396946|CARD11	REV__ENSG00000198286|ENST00000396946|CARD11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.2317504882812	2	563.234444	1124.45433	0.50287	0.00028323	-2.5857	-0.0014564	-2.0829	-0.0011731	563.2328344134445	78.052	1.0349	78.458	78.059	79.094	0.4053					56	24	3	0	0	0	0.55097	1	8931	8931		49.442	15.269	1	1336800	+		4120	23314	2745	2748	4670	4670		356			-0.10291425458012782
DEEECCIC	8	Unmodified	_DEEECCIC_					0	0	0		ENSG00000110315|ENST00000265981|RNF141	ENSG00000110315|ENST00000265981|RNF141	ENSG00000110315|ENST00000265981|RNF141	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28765869140625	2	472.145729	942.276904	0.72402	0.00034184	-2.9124	-0.0013751	-2.1884	-0.0010332	472.1446380007394	95.07	0.15934	95.233	95.151	95.311	0.16308					6	3	2	0	0	0	0.4196	1	9733	9733		21.702	0	1	37140			4121	2519	2746	2749	4671	4671					-0.196542955333598
DEEEEFDYLS	10	Unmodified	_DEEEEFDYLS_					0	0	0		ENSG00000182224|ENST00000332439|CYB5D1	ENSG00000182224|ENST00000332439|CYB5D1	ENSG00000182224|ENST00000332439|CYB5D1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2460021972656	3	425.834829	1274.48266	-0.18274	-7.7817E-05	3.3074	0.0014084	3.1247	0.0013306	426.17044563722425	87.916	0.17427	87.984	87.918	88.093	0.067711					5	3	2	0	0	0	0.37624	1	8920	8920		20.03	0	1	11464			4122	7437	2747	2750	4672	4672					-0.14360404277067573
DEEPPPRR	8	Unmodified	_DEEPPPRR_					0	0	0		nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	nc|ENSG00000148337|Q9ULV3-5|CIZ1	nc|ENSG00000148337|Q9ULV3-5|CIZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.2492980957031	2	498.24888	994.483208	0.84359	0.00042032	2.7736	0.001382	3.6172	0.0018023	498.2504129619651	84.553	2.4341	84.481	83.409	85.843	-0.07196					123	55	3	0	0	0	0.93786	1	8576	8576		53.351	8.8204	1	102680			4123	4951	2748	2751	4673	4673					-0.014254752560418638
DEEQLLEMARA	11	Unmodified	_DEEQLLEMARA_					0	0	0			REV__CON__P01030	REV__CON__P01030	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7803039550781	3	435.543215	1303.60782	1.7172	0.00074791	-0.47603	-0.00020733	1.2412	0.00054058	435.54290844219366	36.508	0.49331	36.949	36.745	37.238	0.44043					17	11	2	0	0	0	0.17334	1	2924	2924		27.644	8.017	1	112550	+	+	4124	15959	2749	2752	4674	4674					-0.031843906216863616
DEERIPMLV	9	Unmodified	_DEERIPMLV_					0	0	0		ENSG00000011275|ENST00000389902|RNF216;nc|ENSG00000011275|Q9NWF9|RNF216	ENSG00000011275|ENST00000389902|RNF216	ENSG00000011275|ENST00000389902|RNF216	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.2820434570312	2	551.284074	1100.5536	0.77804	0.00042892	-0.63561	-0.0003504	0.14243	7.8518E-05	551.2835921377737	60.477	1.0057	60.445	59.982	60.987	-0.03223					48	28	2	0	0	0	0.39977	1	5726	5726		57.811	2.3071	1	132690			4125	786	2750	2753	4675	4675					0.007340620173863499
DEERKALETK	10	Unmodified	_DEERKALETK_					0	0	0		ENSG00000131437|ENST00000403231|KIF3A;nc|ENSG00000131437|Q9Y496|KIF3A;ENST00000487055.1_1_5:132036305-132039285:-|nuORF	ENSG00000131437|ENST00000403231|KIF3A	ENSG00000131437|ENST00000403231|KIF3A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.9119873046875	3	406.882337	1217.62518	0.67706	0.00027548	4.0832	0.0016614	4.7602	0.0019369	406.8839553356127	37.09	0.46228	37.576	37.408	37.87	0.48581					16	10	2	0	0	0	0.37624	1	3009	3009		36.318	10.254	1	73964			4126	3731	2751	2754	4676	4676					0.02507272975617525
DEERLSGF	8	Unmodified	_DEERLSGF_					0	0	0			REV__ENSG00000133056|ENST00000684373|PIK3C2B	REV__ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2468566894531	2	476.722164	951.429775	-0.87119	-0.00041532	-1.4596	-0.00069581	-2.3308	-0.0011111	476.7212093600626	64.288	0.75908	64.842	64.343	65.102	0.55386					30	17	2	0	0	0	0.4196	1	6998	6998		30.504	0	1	96108	+		4127	19053	2752	2755	4677	4677					-0.04788272758560197
DEFEDRGY	8	Unmodified	_DEFEDRGY_					0	0	0			REV__ENSG00000173013|ENST00000310085|CCDC96	REV__ENSG00000173013|ENST00000310085|CCDC96	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.7091674804688	2	515.709254	1029.40395	0.3793	0.00019561	-0.45136	-0.00023277	-0.07206	-3.7162E-05	515.708926489124	30.012	0.98	29.997	29.601	30.581	-0.015167					58	23	4	0	0	0	0.9159	1	1568	1568		44.531	0.41427	1	333030	+		4128	21879	2753	2756	4678	4678					-0.10957167000833579
DEFGYLFPS	9	Unmodified	_DEFGYLFPS_					0	0	0		ENST00000538010.5_1_12:122499032-122499182:+|nuORF	ENST00000538010.5_1_12:122499032-122499182:+|nuORF	ENST00000538010.5_1_12:122499032-122499182:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7515258789062	2	537.742565	1073.47058	-0.11158	-6.0001E-05	1.3047	0.00070161	1.1932	0.00064161	537.7429631368459	57.767	0.88784	58.32	58.077	58.964	0.55354					31	21	3	0	0	0	0.20789	1	6009	6009		11.511	0	1	271740			4129	13457	2754	2757	4679	4679					-0.06321931438969841
DEFLVLSKN	9	Unmodified	_DEFLVLSKN_					0	0	0			REV__nc|ENSG00000182010|Q8IZC4-2|RTKN2	REV__nc|ENSG00000182010|Q8IZC4-2|RTKN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.7716064453125	2	532.784764	1063.55498	-0.65138	-0.00034704	-0.5087	-0.00027103	-1.1601	-0.00061807	532.7844525944507	47.552	0.85492	48.023	47.693	48.548	0.47139					32	21	3	0	0	0	0.20789	1	4496	4496		30.504	2.6214	1	601370	+		4130	30075	2755	2758	4680	4680					0.025740193777892273
DEGINAYVK	9	Unmodified	_DEGINAYVK_					0	0	0			REV__ENSG00000177485|ENST00000557385|ZBTB33	REV__ENSG00000177485|ENST00000557385|ZBTB33	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.347900390625	2	504.753464	1007.49238	2.1453	0.0010829	-2.5354	-0.0012798	-0.39007	-0.00019689	504.75202401325924	36.325	0.29757	36.766	36.573	36.871	0.44043					11	6	2	0	0	0	0.20789	1	2848	2848		27.882	4.8398	1	120740	+		4131	22210	2756	2759	4681	4681					-0.011071266903741162
DEGLFLRSQ	9	Unmodified	_DEGLFLRSQ_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.7731323242188	2	532.772188	1063.52982	0.40969	0.00021827	-0.80466	-0.0004287	-0.39496	-0.00021043	532.7716693432346	48.491	0.73569	48.492	48.189	48.925	0.00016785					27	16	2	0	0	0	0.74721	1	4062	4062		37.159	6.8414	1	306420			4132	6708	2757	2760	4682	4682					0.0005996457521177945
DEGRQLSKTLP	11	Unmodified	_DEGRQLSKTLP_					0	0	0			REV__ENSG00000073910|ENST00000542859|FRY	REV__ENSG00000073910|ENST00000542859|FRY	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3361206054688	2	622.335684	1242.65681	-0.073789	-4.5921E-05	1.2549	0.00078099	1.1811	0.00073506	622.3363752507829	111.19	1.2568	111.19	110.57	111.83	0					110	41	4	0	0	0	0.74022	1	11552	11552		14.865	0	1	190840	+		4133	16683	2758	2761	4683	4683					0.04519265729595645
DEGRVEIGF	9	Unmodified	_DEGRVEIGF_					0	0	0			REV__ENSG00000065060|ENST00000192788|BLTP3A	REV__ENSG00000065060|ENST00000192788|BLTP3A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.8570556640625	2	511.251089	1020.48762	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.18	1	64.3	63.8	64.8	0.12004								0	0	0	0.27974	1	5639	5639		38.806	0	1		+		4134	16491	2759	2762	4684	4684					-0.02180010833126289
DEGSVASLLV	10	Unmodified	_DEGSVASLLV_					0	0	0			REV__nc|ENSG00000107581|Q14152-2|EIF3A	REV__nc|ENSG00000107581|Q14152-2|EIF3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.25970458984375	2	495.261122	988.507691	1.1508	0.00056992	-3.3281	-0.0016483	-2.1773	-0.0010783	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.8608	1	2704	2704		34.173	4.331	1	3842700	+		4135	17664	2760	2763	4685	4685					0.012977401068155814
DEGSYDPL	8	Unmodified	_DEGSYDPL_					0	0	0		ENSG00000139352|ENST00000266744|ASCL1	ENSG00000139352|ENST00000266744|ASCL1	ENSG00000139352|ENST00000266744|ASCL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.1863098144531	2	448.187623	894.360692	0.89737	0.00040219	-4.2374	-0.0018992	-3.3401	-0.001497	448.18579739658765	99.321	0.87592	99.682	99.407	100.28	0.36136					46	21	3	0	0	0	0.88915	1	12002	12002		35.201	0	1	724790			4136	4365	2761	2764	4686	4686					-0.09071356778133577
DEIGLLGS	8	Unmodified	_DEIGLLGS_					0	0	0		ENST00000449297.6_1_6:56818586-56819281:-|nuORF	ENST00000449297.6_1_6:56818586-56819281:-|nuORF	ENST00000449297.6_1_6:56818586-56819281:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.2132873535156	2	402.210901	802.407249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.542	1	74.498	73.998	74.998	-0.043877								0	0	0	0.29344	1	7319	7319		31.955	6.5047	1				4137	11873	2762	2765	4687	4687					-0.0018587215618026676
DEIIFFAY	8	Unmodified	_DEIIFFAY_					0	0	0		nc|ENSG00000133962|Q9H7T0-2|CATSPERB;ENSG00000133962|ENST00000256343|CATSPERB	nc|ENSG00000133962|Q9H7T0-2|CATSPERB	nc|ENSG00000133962|Q9H7T0-2|CATSPERB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7708740234375	2	509.250026	1016.4855	1.1421	0.00058162	3.9451	0.002009	5.0872	0.0025907	509.2516251328234	49.087	0.81007	49.991	49.686	50.496	0.90424					31	19	3	0	0	0	0.4196	1	4839	4839		31.579	10.632	1	336230			4138	3902	2763	2766	4688	4688					-0.02208439570961218
DEIKPGPIVIE	11	Unmodified	_DEIKPGPIVIE_					0	0	0		nc|ENSG00000186063|Q96BJ3-2|AIDA;ENST00000514881.1_1_4:159199390-159199825:+|nuORF;nc|ENSG00000186063|Q96BJ3-3|AIDA;ENSG00000186063|ENST00000340020|AIDA	nc|ENSG00000186063|Q96BJ3-2|AIDA	nc|ENSG00000186063|Q96BJ3-2|AIDA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.727294921875	3	403.895695	1208.66525	-1.9337	-0.00078101	0.30452	0.00012299	-1.6292	-0.00065802	403.89572816951636	23.091	0.32196	23.143	22.897	23.219	0.05291					27	16	2	0	0	0	0.17334	1	712	712		27.644	0	1	36055			4139	7770	2764	2767	4689	4689					0.06926819646196236
DEIMDRIVK	9	Unmodified	_DEIMDRIVK_					0	0	0		nc|ENSG00000134775|Q2V2M9-2|FHOD3;nc|ENSG00000134775|Q2V2M9|FHOD3;nc|ENSG00000134775|Q2V2M9-3|FHOD3;ENSG00000134775|ENST00000590592|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.3525390625	2	559.797349	1117.58014	0.92056	0.00051533	-2.3423	-0.0013112	-1.4217	-0.00079587	559.7950259347922	53.961	0.58629	54.37	54.032	54.618	0.40924					19	13	2	0	0	0	0.20789	1	5495	5495		34.173	0	1	120160			4140	3958	2765	2768	4690	4690					0.02605750908742266
DEIVALPLL	9	Unmodified	_DEIVALPLL_					0	0	0			REV__ENST00000054666.10_1_1:7831420-7833566:+|nuORF	REV__ENST00000054666.10_1_1:7831420-7833566:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7964782714844	2	491.794601	981.574648	0.38495	0.00018932	2.0164	0.00099166	2.4014	0.001181	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.7932	1	4517	4517		25.45	1.2474	1	2075300	+		4141	24068	2766	2769	4691	4691					0.08312395388577443
DEKEPLIN	8	Unmodified	_DEKEPLIN_					0	0	0			REV__nc|ENSG00000126838|P20742-2|PZP	REV__nc|ENSG00000126838|P20742-2|PZP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97552490234375	2	479.248015	956.481476	-0.67174	-0.00032193	-0.9209	-0.00044134	-1.5926	-0.00076327	479.2475364357215	50.536	0.33997	50.512	50.34	50.68	-0.02343					10	7	2	0	0	0	0.4196	1	4372	4372		21.96	0	1	59059	+		4142	18715	2767	2770	4692	4692					0.001494709353437429
DEKLNPYY	8	Unmodified	_DEKLNPYY_					0	0	0			REV__ENST00000534358.5_2_11:118394338-118394506:+|nuORF	REV__ENST00000534358.5_2_11:118394338-118394506:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	521.7977905273438	2	521.248015	1040.48148	-1.6242	-0.00084659	-3.1717	-0.0016532	-4.7958	-0.0024998	521.745987410651	33.243	0.096626	33.243	33.196	33.293	0					4	2	2	0	0	0	0.4196	1	1694	1694		23.042	8.9054	1	13394	+		4143	28366	2768	2771	4693	4693					-0.03714529064677663
DEKLSGKLDDV	11	Unmodified	_DEKLSGKLDDV_					0	0	0			REV__ENSG00000164056|ENST00000651917|SPRY1	REV__ENSG00000164056|ENST00000651917|SPRY1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.8791198730469	3	406.878592	1217.61395	-2.1643	-0.00088061	3.7652	0.001532	1.6009	0.00065137	406.88003973926544	18.414	0.41613	18.414	18.223	18.639	0					39	16	3	0	0	0	0.70278	1	300	300		31.068	1.5174	1	262240	+		4144	21018	2769	2772	4694	4694					0.013844508814599976
DEKRRKRGV	9	Unmodified	_DEKRRKRGV_					0	0	0			REV__ENSG00000186416|ENST00000688521|NKRF;REV__nc|ENSG00000186416|O15226-2|NKRF	REV__ENSG00000186416|ENST00000688521|NKRF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.3388061523438	2	572.338895	1142.66324	0.5725	0.00032767	1.4452	0.00082713	2.0177	0.0011548	572.3396541914032	101.39	0.82917	101.6	101.2	102.03	0.2058					35	19	2	0	0	0	0.78983	1	10636	10636		27.882	2.3082	1	407040	+		4145	22850;30107	2770	2773	4695	4695					0.09761248471613726
DEKYTPSEQL	10	Unmodified	_DEKYTPSEQL_					0	0	0			REV__ENSG00000147082|ENST00000376042|CCNB3	REV__ENSG00000147082|ENST00000376042|CCNB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.2860107421875	2	605.285325	1208.5561	0.98247	0.00059468	0.45991	0.00027838	1.4424	0.00087305	605.2852052046003	58.208	1.6782	58.295	57.834	59.512	0.087002					167	73	3	0	0	0	0.67689	1	4958	4958		41.427	2.1738	1	1590000	+		4146	20049	2771	2774	4696	4696					-0.039838110439632146
DEKYTPSEQL	10	Unmodified	_DEKYTPSEQL_					0	0	0			REV__ENSG00000147082|ENST00000376042|CCNB3	REV__ENSG00000147082|ENST00000376042|CCNB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.2840576171875	2	605.285325	1208.5561	-0.21892	-0.00013251	1.1649	0.00070509	0.94597	0.00057258	605.285887959875	58.271	1.5426	58.263	57.785	59.328	-0.0074387					123	65	2	0	0	0	0.76747	1	4915	4915		29.17	0	1	1563500	+		4147	20049	2771	2774	4697	4697					-0.039838110439632146
DELCTKQV	8	Unmodified	_DELCTKQV_					0	0	0			REV__ENST00000559082.5_1_15:78832772-78834893:+|nuORF	REV__ENST00000559082.5_1_15:78832772-78834893:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.2333068847656	2	468.228768	934.442982	0.4891	0.00022901	3.7789	0.0017694	4.268	0.0019984	468.2300187593416	69.47	0.48917	69.599	69.261	69.75	0.1291					38	22	2	0	0	0	0.4196	1	6257	6257		11.511	0	1	368920	+		4148	24064	2772	2775	4698	4698					-0.02686157970822478
DELGGVYLQF	10	Unmodified	_DELGGVYLQF_					0	0	0		nc|ENSG00000118705|P04844-2|RPN2;ENSG00000118705|ENST00000237530|RPN2	nc|ENSG00000118705|P04844-2|RPN2	nc|ENSG00000118705|P04844-2|RPN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.7796630859375	2	570.782222	1139.54989	-0.36907	-0.00021066	-3.0388	-0.0017345	-3.4078	-0.0019451	570.7803128361679	24.518	0.87242	24.574	24.135	25.007	0.055485					44	22	3	0	0	0	0.8608	1	921	921		34.173	5.023	1	98944			4149	3042	2773	2776	4699	4699					-0.014302844848316454
DELGIRVR	8	Unmodified	_DELGIRVR_					0	0	0			REV__ENSG00000143443|ENST00000368926|C1orf56	REV__ENSG00000143443|ENST00000368926|C1orf56	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2778015136719	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.87479	1	9018	9018		30.504	1.3541	1	7289200	+		4150	19812	2774	2777	4700	4700					0.060319920203255606
DELGPLHPLKM	11	Unmodified	_DELGPLHPLKM_					0	0	0			REV__ENSG00000139180|ENST00000266544|NDUFA9	REV__ENSG00000139180|ENST00000266544|NDUFA9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	624.4093017578125	2	625.334098	1248.65364	0.52152	0.00032613	-3.4322	-0.0021463	-2.9106	-0.0018201	625.833462775907	56.05	0.13755	56.149	56.027	56.165	0.09919					6	4	2	0	0	0	0.17714	1	4715	4715		8.6937	0	1	43315	+		4151	19520	2775	2778	4701	4701					0.03926299351178386
DELIDFTEY	9	Unmodified	_DELIDFTEY_					0	0	0			REV__ENST00000405027.1_1_6:3978829-3979330:+|nuORF	REV__ENST00000405027.1_1_6:3978829-3979330:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.751708984375	2	572.755869	1143.49719	-0.15515	-8.8864E-05	-2.106	-0.0012062	-2.2611	-0.0012951	572.7541433842922	51.166	0.5799	51.601	51.326	51.906	0.43505					28	13	3	0	0	0	0.43338	1	5055	5055		55.504	2.1528	1	849170	+		4152	17689	2776	2779	4702	4702					-0.06882287338271453
DELILEGND	9	Unmodified	_DELILEGND_					0	0	0		ENST00000464118.2_1_19:30447279-30447516:-|nuORF;ENST00000475906.1_1_14:35732014-35732239:+|nuORF;ENST00000511643.5_1_4:39456165-39456631:-|nuORF;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENSG00000163682|ENST00000295955|RPL9	ENST00000464118.2_1_19:30447279-30447516:-|nuORF	ENST00000464118.2_1_19:30447279-30447516:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.75616455078125	2	509.240386	1016.46622	1.4702	0.00074868	-0.95544	-0.00048655	0.51475	0.00026213	509.2397318965805	50.083	0.49031	50.928	50.683	51.173	0.84501					21	11	3	0	0	0	0.20789	1	4898	4898		8.6937	0	1	307220			4153	12083	2777	2780	4703	4703					-0.041354406525101695
DELIMSKY	8	Unmodified	_DELIMSKY_					0	0	0			REV__nc|ENSG00000106459|Q16656-2|NRF1	REV__nc|ENSG00000106459|Q16656-2|NRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.746826171875	2	499.746793	997.479033	-0.85273	-0.00042615	1.1589	0.00057914	0.30615	0.000153	499.74724797378053	74.742	3.1094	75.133	73.907	77.016	0.3911					155	76	3	0	0	0	0.87479	1	8495	8495		30.504	0	1	1032200	+		4154	17614	2778	2781	4704	4704					-0.0198070079397894
DELKSKKRG	9	Unmodified	_DELKSKKRG_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7946166992188	2	530.809105	1059.60366	2.8792	0.0015283	1.0812	0.0005739	3.9604	0.0021022	530.8086334321874	102.4	1.0794	102.69	101.95	103.03	0.29865					60	25	4	0	0	0	0.20789	1	12392	12392		20.947	0	1	672210	+		4155	21394	2779	2782	4705	4705					0.0762393273755606
DELKVLKIHIN	11	Unmodified	_DELKVLKIHIN_					0	0	0		ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7881164550781	3	441.266122	1320.77654	-0.84436	-0.00037259	0.077204	3.4067E-05	-0.76716	-0.00033852	441.26610648062194	38.459	0.40305	38.8	38.577	38.98	0.34187					23	9	4	0	0	0	0.17536	1	3151	3151		45.908	25.071	1	194700			4156	1102	2780	2783	4706	4706					0.12897879074148477
DELLFGIF	8	Unmodified	_DELLFGIF_					0	0	0			REV__ENSG00000104290|ENST00000240093|FZD3	REV__ENSG00000104290|ENST00000240093|FZD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2331237792969	2	477.252569	952.490584	-1.0851	-0.00051785	-2.6013	-0.0012415	-3.6864	-0.0017593	477.2512611672547	67.212	0.45862	67.763	67.572	68.03	0.55071					16	10	2	0	0	0	0.89457	1	7353	7353		37.028	7.1869	1	180900	+		4157	17444	2781	2784	4707	4707					0.012438642916663412
DELLSSGIIN	10	Unmodified	_DELLSSGIIN_					0	0	0		nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758|PTBP3;ENST00000343327.6_1_9:115030452-115095785:-|nuORF	nc|ENSG00000119314|O95758-4|PTBP3	nc|ENSG00000119314|O95758-4|PTBP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2761840820312	2	530.779679	1059.5448	-0.11884	-6.3077E-05	-0.59816	-0.00031749	-0.717	-0.00038057	531.2818641323214	58.654	0.091663	58.741	58.682	58.774	0.087002					6	4	2	0	0	0	0.37624	1	4991	4991		24.519	0	1	38304			4158	14869	2782	2785	4708	4708					0.017414116525969803
DELNRLKHKL	10	Unmodified	_DELNRLKHKL_					0	0	0			REV__ENSG00000153157|ENST00000283141|SYCP2L	REV__ENSG00000153157|ENST00000283141|SYCP2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3687744140625	2	633.369861	1264.72517	1.4714	0.00093196	-2.6119	-0.0016543	-1.1404	-0.0007223	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.85692	1	10049	10049		24.519	7.1542	1	11430000	+		4159	20334	2783	2786	4709	4709					0.10339555100085818
DELNRWDSQM	10	Unmodified	_DELNRWDSQM_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	647.2797241210938	2	647.280051	1292.54555	-1.0404	-0.00067345	1.3933	0.00090188	0.3529	0.00022843	647.2810878546856	58.803	1.0008	59.195	58.651	59.652	0.39209					69	23	4	0	0	0	0.8545	1	6162	6162		36.447	2.5251	1	2569500			4160	1132	2784	2787	4710	4710					-0.08902116970034513
DELQVSIV	8	Unmodified	_DELQVSIV_					0	0	0			REV__ENSG00000197056|ENST00000359858|ZMYM1	REV__ENSG00000197056|ENST00000359858|ZMYM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7455749511719	2	451.745108	901.475663	-0.34142	-0.00015424	1.894	0.00085561	1.5526	0.00070137	451.7457899922303	34.694	1.135	34.701	34.293	35.428	0.0063934					58	27	3	0	0	0	0.79403	1	2136	2136		63.306	3.0123	1	280890	+		4161	23190	2785	2788	4711	4711					0.020983724236771195
DELRQLLF	8	Unmodified	_DELRQLLF_					0	0	0			REV__ENSG00000059588|ENST00000040877|TARBP1	REV__ENSG00000059588|ENST00000040877|TARBP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2972412109375	2	517.287474	1032.5604	0.044139	2.2833E-05	0.64065	0.0003314	0.68479	0.00035423	517.2870196168893	62.565	0.95092	63.119	62.69	63.641	0.5545					33	21	2	0	0	0	0.4196	1	6744	6744		15.642	0	1	188980	+		4162	16445	2786	2789	4712	4712					0.04541742960282136
DELRRLAVK	9	Unmodified	_DELRRLAVK_					0	0	0			REV__ENST00000604175.5_1_9:90586022-90589430:-|nuORF;REV__ENST00000603475.1_1_9:90586022-90589145:-|nuORF	REV__ENST00000603475.1_1_9:90586022-90589145:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.3375244140625	2	550.332747	1098.65094	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.37	1	109.45	108.95	109.95	0.078552								0	0	0	0.30613	1	11759	11759		42.396	13.247	1		+		4163	20482;29345	2787	2790	4713	4713					0.10556212008555121
DELVVLVN	8	Unmodified	_DELVVLVN_					0	0	0			REV__ENSG00000132854|ENST00000371153|KANK4	REV__ENSG00000132854|ENST00000371153|KANK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7542419433594	2	450.755475	899.496398	0.58167	0.00026219	-3.5127	-0.0015834	-2.9311	-0.0013212	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.92457	1	7813	7813		47.916	10.756	1	285810	+		4164	19038	2788	2791	4714	4714					0.04262962803340997
DEMEFNPVQQ	10	Unmodified	_DEMEFNPVQQ_					0	0	0		ENSG00000084463|ENST00000261167|WBP11	ENSG00000084463|ENST00000261167|WBP11	ENSG00000084463|ENST00000261167|WBP11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.7669677734375	2	618.763703	1235.51285	-0.049781	-3.0802E-05	3.3352	0.0020637	3.2854	0.0020329	618.7656627131156	29.344	0.96056	29.301	29.054	30.015	-0.043095					56	29	3	0	0	0	0.86471	1	1522	1522		30.318	3.6248	1	73539			4165	1518	2789	2792	4715	4715					-0.09548324092884286
DEMGDDCNCPC	11	Unmodified	_DEMGDDCNCPC_					0	0	0		ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC;nc|ENSG00000135272|Q9P1T7-1|MDFIC	ENST00000431629.5_2_7:114654517-114655986:+|nuORF	ENST00000431629.5_2_7:114654517-114655986:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.8288879394531	3	401.11367	1200.31918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.731	1	20.807	20.307	21.307	0.075848								0	0	0	0.56276	1	530	530		9.2118	2.1931	1				4166	3999	2790	2793	4716	4716					-0.27296688187288964
DENKKIKNV	9	Unmodified	_DENKKIKNV_					0	0	0			REV__ENSG00000131747|ENST00000423485|TOP2A	REV__ENSG00000131747|ENST00000423485|TOP2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.1624145507812	2	544.308938	1086.60332	-1.2198	-0.00066393	-0.50471	-0.00027472	-1.7245	-0.00093865	544.3086673454704	44.78	0.16562	45.625	45.501	45.667	0.84438					5	3	2	0	0	0	0.20789	1	4135	4135		21.96	18.276	1	142090	+		4167	18961	2791	2794	4717	4717					0.0634851301767867
DENKKVGL	8	Unmodified	_DENKKVGL_					0	0	0		nc|ENSG00000013374|Q9Y5A7-2|NUB1;ENSG00000013374|ENST00000568733|NUB1	nc|ENSG00000013374|Q9Y5A7-2|NUB1	nc|ENSG00000013374|Q9Y5A7-2|NUB1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.74658203125	2	451.750724	901.486896	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.149	1	34.093	33.593	34.593	-0.056385								0	0	0	0.29264	1	2124	2124		29.15	0	1				4168	809	2792	2795	4718	4718					0.03221194517800541
DENLIQFYL	9	Unmodified	_DENLIQFYL_					0	0	0		nc|ENSG00000122966|O14578-2|CIT;nc|ENSG00000122966|O14578|CIT;ENSG00000122966|ENST00000392521|CIT	nc|ENSG00000122966|O14578-2|CIT	nc|ENSG00000122966|O14578-2|CIT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.787841796875	2	577.790047	1153.56554	0.021645	1.2506E-05	-3.2422	-0.0018733	-3.2205	-0.0018608	577.7880770174522	49.842	0.6616	50.687	50.313	50.974	0.84501					41	15	4	0	0	0	0.39977	1	4881	4881		57.811	2.3071	1	1350900			4169	3256	2793	2796	4719	4719					-0.0050999796776523
DENTTVRVP	9	Unmodified	_DENTTVRVP_					0	0	0		ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3094482421875	2	515.76182	1029.50909	-0.2789	-0.00014385	2.6708	0.0013775	2.3919	0.0012336	515.7638882844105	59.29	0.26377	59.843	59.775	60.038	0.55323					9	6	2	0	0	0	0.20789	1	6249	6249		21.96	12.254	1	151530			4170	1860	2794	2797	4720	4720					-0.00448625804438052
DENYENDS	8	Unmodified	_DENYENDS_					0	0	0		ENSG00000134769|ENST00000444659|DTNA;nc|ENSG00000134769|Q9Y4J8|DTNA;nc|ENSG00000134769|Q9Y4J8-15|DTNA;nc|ENSG00000134769|Q9Y4J8-14|DTNA;nc|ENSG00000134769|Q9Y4J8-2|DTNA;nc|ENSG00000134769|Q9Y4J8-13|DTNA;nc|ENSG00000134769|Q9Y4J8-11|DTNA;nc|ENSG00000134769|Q9Y4J8-10|DTNA;nc|ENSG00000134769|Q9Y4J8-6|DTNA	ENSG00000134769|ENST00000444659|DTNA	ENSG00000134769|ENST00000444659|DTNA	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.1690368652344	2	493.172701	984.330849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.783	1	79.914	79.414	80.414	0.13086								0	0	0	0.29264	1	7578	7578		29.15	3.5755	1				4171	3957	2795	2798	4721	4721					-0.1619434051413009
DEPIPNNSIWG	11	Unmodified	_DEPIPNNSIWG_					0	0	0			REV__ENSG00000102174|ENST00000379374|PHEX	REV__ENSG00000102174|ENST00000379374|PHEX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.2930908203125	2	621.293485	1240.57242	0.33695	0.00020934	-3.9002	-0.0024231	-3.5632	-0.0022138	621.291387826647	23.89	0.61201	23.847	23.629	24.241	-0.043221					23	17	2	0	0	0	0.75164	1	826	826		21.686	0.8486	1	26913	+		4172	17329	2796	2799	4722	4722					-0.03824685087192847
DEPLQPVAL	9	Unmodified	_DEPLQPVAL_					0	0	0			REV__ENST00000487903.5_1_13:113526059-113532532:+|nuORF	REV__ENST00000487903.5_1_13:113526059-113532532:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7961120605469	2	491.266207	980.517862	-1.8202	-0.00089418	2.878	0.0014139	1.0579	0.0005197	491.26755359498867	50.086	0.90754	50.089	49.81	50.718	0.0035973					29	20	2	0	0	0	0.20789	1	4295	4295		34.173	13.226	1	63689	+		4173	27585	2797	2800	4723	4723					0.026823478320466165
DEPNELPPIN	10	Unmodified	_DEPNELPPIN_					0	0	0			REV__ENSG00000124827|ENST00000379491|GCM2	REV__ENSG00000124827|ENST00000379491|GCM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.27587890625	2	569.274761	1136.53497	-1.0015	-0.00057015	1.1111	0.0006325	0.10954	6.2356E-05	569.2753008923387	58.655	0.52158	58.655	58.377	58.898	0					56	23	3	0	0	0	0.82886	1	5078	5078		37.812	3.8899	1	173440	+		4174	18618	2798	2801	4724	4724					-0.027837763527941206
DEPQPGAHV	9	Unmodified	_DEPQPGAHV_					0	0	0		ENST00000345664.10_1_1:173769357-173769537:-|nuORF	ENST00000345664.10_1_1:173769357-173769537:-|nuORF	ENST00000345664.10_1_1:173769357-173769537:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.22271728515625	2	475.222331	948.430109	0.16074	7.6388E-05	3.6697	0.0017439	3.8304	0.0018203	475.2239634085171	26.709	1.9087	26.533	25.72	27.628	-0.17559					69	42	2	0	0	0	0.77546	1	1447	1447		31.955	1.4512	1	124270			4175	10307	2799	2802	4725	4725					-0.046168530387149076
DEPSPTGLH	9	Unmodified	_DEPSPTGLH_					0	0	0			REV__nc|ENSG00000168067|Q12851-2|MAP4K2	REV__nc|ENSG00000168067|Q12851-2|MAP4K2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.7205505371094	2	476.722164	951.429775	-2.36	-0.001125	-0.34494	-0.00016444	-2.7049	-0.0012895	476.72188156607797	89.101	0.90321	89.572	89.195	90.098	0.47068					46	21	3	0	0	0	0.72402	1	10544	10544		38.806	2.3594	1	1072700	+		4176	21459	2800	2803	4726	4726					-0.04788272758582934
DEPSPTGLH	9	Unmodified	_DEPSPTGLH_					0	0	0			REV__nc|ENSG00000168067|Q12851-2|MAP4K2	REV__nc|ENSG00000168067|Q12851-2|MAP4K2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	476.722164	951.429775	1.2436	0.00059287	-3.9472	-0.0018817	-2.7036	-0.0012888	476.72013818854134	89.073	0.91069	89.523	89.202	90.113	0.45058	-0.024264	-0.0017064	NaN	38.806	47	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	743070	+		4177	21459	2800	2803							-0.04788272758582934
DEPWFTKTR	9	Unmodified	_DEPWFTKTR_					0	0	0		nc|ENSG00000137872|Q8NFY4-7|SEMA6D;nc|ENSG00000137872|Q8NFY4-8|SEMA6D;nc|ENSG00000137872|Q8NFY4-3|SEMA6D;nc|ENSG00000137872|Q8NFY4-2|SEMA6D;nc|ENSG00000137872|Q8NFY4-4|SEMA6D;nc|ENSG00000137872|Q8NFY4-5|SEMA6D;nc|ENSG00000137872|Q8NFY4-6|SEMA6D;ENSG00000137872|ENST00000536845|SEMA6D	nc|ENSG00000137872|Q8NFY4-7|SEMA6D	nc|ENSG00000137872|Q8NFY4-7|SEMA6D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.2948608398438	2	590.293288	1178.57202	-0.22915	-0.00013527	0.44018	0.00025983	0.21102	0.00012456	590.2952274720436	76.046	1.3615	76.441	75.658	77.02	0.39507					127	32	6	0	0	0	0.77244	1	8642	8642		32.812	0	1	3248400			4178	4243	2801	2804	4727	4727					-0.01012060016387295
DEQFGEVY	8	Unmodified	_DEQFGEVY_					0	0	0			REV__ENSG00000179409|ENST00000319004|GEMIN4	REV__ENSG00000179409|ENST00000319004|GEMIN4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.27716064453125	2	493.708722	985.402892	-1.4802	-0.00073081	-2.5377	-0.0012529	-4.018	-0.0019837	493.7070461123458	30.468	0.44152	30.496	30.185	30.627	0.028618					12	9	2	0	0	0	0.4196	1	2002	2002		26.796	0	1	35450	+		4179	22337	2802	2805	4728	4728					-0.09039381369746025
DEQHLSQDH	9	Unmodified	_DEQHLSQDH_					0	0	0		ENST00000457750.1_1_3:195346984-195347101:+|nuORF	ENST00000457750.1_1_3:195346984-195347101:+|nuORF	ENST00000457750.1_1_3:195346984-195347101:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.73486328125	2	554.736334	1107.45811	-0.48565	-0.00026941	0.774	0.00042937	0.28835	0.00015996	554.7365693043627	30.549	0.41855	30.574	30.337	30.755	0.025013					19	11	2	0	0	0	0.7932	1	1588	1588		26.693	0	1	43566			4180	11984	2803	2806	4729	4729					-0.09131574849288882
DEQIDSESLI	10	Unmodified	_DEQIDSESLI_					0	0	0			REV__ENSG00000138658|ENST00000505019|ZGRF1	REV__ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.76806640625	2	574.769508	1147.52446	-0.78612	-0.00045184	0.48388	0.00027812	-0.30224	-0.00017372	574.7696176678855	59.825	1.2222	60.378	59.958	61.18	0.55323					89	32	4	0	0	0	0.35939	1	6406	6406		67.494	6.5217	1	4150300	+		4181	19490	2804	2807	4730	4730					-0.043398037978931825
DEQLERLTQ	9	Unmodified	_DEQLERLTQ_					0	0	0		ENST00000561302.5_1_15:76430142-76521275:+|nuORF;nc|ENSG00000169758|Q2M3C6-2|TMEM266;ENSG00000169758|ENST00000388942|TMEM266	ENST00000561302.5_1_15:76430142-76521275:+|nuORF	ENST00000561302.5_1_15:76430142-76521275:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.7473754882812	2	566.28566	1130.55677	-0.75399	-0.00042697	4.3713	0.0024754	3.6173	0.0020484	566.287994846096	72.217	0.9144	72.602	72.251	73.166	0.38581					48	21	3	0	0	0	0.20789	1	8084	8084		42.864	0	1	654660			4182	6521	2805	2808	4731	4731					-0.003289716042445434
DEQLERLTQ	9	Unmodified	_DEQLERLTQ_					0	0	0		ENST00000561302.5_1_15:76430142-76521275:+|nuORF;nc|ENSG00000169758|Q2M3C6-2|TMEM266;ENSG00000169758|ENST00000388942|TMEM266	ENST00000561302.5_1_15:76430142-76521275:+|nuORF	ENST00000561302.5_1_15:76430142-76521275:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	566.28566	1130.55677	0.6682	0.00037839	3.1411	0.0017787	3.8093	0.0021571	566.28721413171	72.082	0.99185	72.632	72.195	73.187	0.55009	0.014904	-0.0008325	NaN	35.152	49	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	763350			4183	6521	2805	2808							-0.003289716042445434
DEQRMTKLK	9	Unmodified	_DEQRMTKLK_					0	0	0			REV__ENSG00000096696|ENST00000379802|DSP	REV__ENSG00000096696|ENST00000379802|DSP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.80517578125	2	574.808248	1147.60194	-0.92196	-0.00052995	-1.368	-0.00078634	-2.29	-0.0013163	574.8069824667461	33.956	0.7061	33.951	33.628	34.334	-0.0047379					37	16	4	0	0	0	0.78528	1	1996	1996		29.17	0	1	142260	+		4184	17077	2806	2809	4732	4732					0.034045556572891655
DERATELAE	9	Unmodified	_DERATELAE_					0	0	0		ENST00000501652.5_1_5:127302595-127417754:-|nuORF;ENST00000508878.5_1_5:127359968-127417754:-|nuORF	ENST00000501652.5_1_5:127302595-127417754:-|nuORF	ENST00000501652.5_1_5:127302595-127417754:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2401733398438	2	517.24346	1032.47237	0.16158	8.3577E-05	0.42534	0.00022	0.58692	0.00030358	517.2435463550286	32.148	0.68988	32.275	31.988	32.677	0.12643					44	15	4	0	0	0	0.64555	1	2258	2258		44.377	2.9506	1	1147000			4185	12845	2807	2810	4733	4733					-0.042569224210183165
DEREQQLTKIQ	11	Unmodified	_DEREQQLTKIQ_					0	0	0			REV__nc|ENSG00000143776|Q5VT25-3|CDC42BPA	REV__nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.800048828125	3	463.244045	1386.71031	-1.9899	-0.00092183	3.2908	0.0015244	1.3008	0.0006026	463.24552900730407	42.481	0.32816	43.179	42.97	43.299	0.69754					18	7	3	0	0	0	0.17244	1	3775	3775		25.068	15.422	1	412370	+		4186	19840	2808	2811	4734	4734					0.032420184414149844
DERRHFSI	8	Unmodified	_DERRHFSI_					0	0	0			REV__ENST00000590158.1_1_19:10225792-10226817:-|nuORF	REV__ENST00000590158.1_1_19:10225792-10226817:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8292236328125	2	530.270147	1058.52574	0.025093	1.3306E-05	-2.7638	-0.0014655	-2.7387	-0.0014522	530.2692623085816	74.263	0.5766	74.654	74.376	74.952	0.39111					21	13	3	0	0	0	0.4196	1	8328	8328		37.812	7.4938	1	174660	+		4187	18911	2809	2812	4735	4735					-0.001180801278223953
DERTKRLT	8	Unmodified	_DERTKRLT_					0	0	0		ENST00000471474.5_1_7:84001357-84001414:-|nuORF	ENST00000471474.5_1_7:84001357-84001414:-|nuORF	ENST00000471474.5_1_7:84001357-84001414:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.250732421875	2	509.78563	1017.55671	-0.1194	-6.0868E-05	2.791	0.0014228	2.6716	0.001362	509.78690123385417	46.167	0.36137	47.09	46.871	47.233	0.92315					14	8	2	0	0	0	0.4196	1	4355	4355		31.53	0	1	254040			4188	12243	2810	2813	4736	4736					0.048630731864250265
DESDSDSDSD	10	Unmodified	_DESDSDSDSD_					0	0	0			REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1657104492188	2	536.16527	1070.31599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.43	1	21.476	20.976	21.976	0.045401								0	0	0	0.45132	1	583	583		14.865	0	1		+		4189	21050	2811	2814	4737	4737					-0.21635877172798246
DESDSDSDSD	10	Unmodified	_DESDSDSDSD_					0	0	0			REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.1647338867188	2	536.16527	1070.31599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.163	1	25.187	24.687	25.687	0.024021								0	0	0	0.45132	1	898	898		10.265	0	1		+		4190	21050	2811	2814	4738	4738					-0.21635877172798246
DESFCFALD	9	Unmodified	_DESFCFALD_					0	0	0			REV__LTR16B_dup677|chr19:37736477-37736832:-|1.2651633122408763|0.3034561894388717|2.06|63.0|7|2|sense	REV__LTR16B_dup677|chr19:37736477-37736832:-|1.2651633122408763|0.3034561894388717|2.06|63.0|7|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7105102539062	2	523.710408	1045.40626	0.9846	0.00051564	2.8875	0.0015122	3.8721	0.0020279	523.7116170205757	24.512	0.58571	24.184	23.936	24.521	-0.32825					20	12	2	0	0	0	0.7932	1	1189	1189		24.203	2.2429	1	89583	+		4191	29640	2812	2815	4739	4739					-0.11462454587399407
DESIGEKVSPL	11	Unmodified	_DESIGEKVSPL_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.328125	2	587.303518	1172.59248	-1.6614	-0.00097572	0.26568	0.00015604	-1.3957	-0.00081968	587.3041587897352	72.411	1.4111	72.797	72.084	73.495	0.38581					37	33	2	0	0	0	0.17574	1	8049	8049		33.922	0	1	179250	+		4192	16090	2813	2816	4740	4740					0.013090658527517007
DESITGRLTRL	11	Unmodified	_DESITGRLTRL_					0	0	0			REV__ENSG00000213445|ENST00000534313|SIPA1	REV__ENSG00000213445|ENST00000534313|SIPA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	630.8494262695312	2	630.848958	1259.68336	2.2532	0.0014214	-1.6442	-0.0010372	0.60896	0.00038416	630.8477428055293	110.22	0.49098	110.27	110.09	110.58	0.054062					43	16	4	0	0	0	0.58425	2	13340	13340;13348		45.972	3.108	1	2854200	+		4193	23617	2814	2817	4741;4742	4741					0.06390954620906086
DESITGRLTRL	11	Unmodified	_DESITGRLTRL_					0	0	0			REV__ENSG00000213445|ENST00000534313|SIPA1	REV__ENSG00000213445|ENST00000534313|SIPA1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	630.848958	1259.68336	1.1522	0.00072686	0.085153	5.3719E-05	1.2373	0.00078057	630.848836753028	110.73	1.3896	110.76	110.4	111.79	0.031746	0.24195	0.00039588	NaN	45.972	141	46	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	700180	+		4194	23617	2814	2817							0.06390954620906086
DESIYGCMVKE	11	Unmodified	_DESIYGCMVKE_					0	0	0			REV__nc|ENSG00000100150|O75140-6|DEPDC5	REV__nc|ENSG00000100150|O75140-6|DEPDC5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	637.271484375	2	637.275589	1272.53662	-0.35273	-0.00022479	0.19399	0.00012362	-0.15875	-0.00010117	637.2757632523374	83.318	0.88019	83.749	83.414	84.294	0.43108					50	20	4	0	0	0	0.60058	1	9675	9675		44.377	1.5129	1	1275500	+		4195	17143	2815	2818	4743	4743					-0.08874226650709716
DESSDDDSDS	10	Unmodified	_DESSDDDSDS_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.1636352539062	2	536.16527	1070.31599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.021	1	57.126	56.626	57.626	0.1055								0	0	0	0.45132	1	4822	4822		19.997	5.1319	1				4196	1462	2816	2819	4744	4744					-0.21635877172798246
DESSEDEGSGS	11	Unmodified	_DESSEDEGSGS_					0	0	0			REV__ENSG00000006712|ENST00000221265|PAF1	REV__ENSG00000006712|ENST00000221265|PAF1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.6902465820312	2	549.688912	1097.36327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.792	1	15.85	15.35	16.35	0.057872								0	0	0	0.56276	1	76	76		19.997	0.89325	1		+		4197	16110	2817	2820	4745	4745					-0.18151597901783134
DETAMLEKLKV	11	Oxidation (M)	_DETAM(Oxidation (M))LEKLKV_		DETAM(1)LEKLKV		DETAM(47)LEKLKV	0	0	1		ENST00000295112.13_1_2:55509501-55511570:+|nuORF;nc|ENSG00000293422|A6NEY8|PRORSD1P	ENST00000295112.13_1_2:55509501-55511570:+|nuORF	ENST00000295112.13_1_2:55509501-55511570:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	646.845947265625	2	646.841953	1291.66935	2.4198	0.0015652	4.3845	0.0028361	6.8042	0.0044013	646.8447423255587	50.153	0.53041	50.999	50.683	51.213	0.84501					29	12	3	0	0	0	0.56641	1	4937	4937		47.228	8.4741	1	1013000			4198	9714	2818	2821	4746	4746		164			0.035185410775739
DEVAILSTPRV	11	Unmodified	_DEVAILSTPRV_					0	0	0		ENST00000437877.1_2_7:1979960-1980038:-|nuORF	ENST00000437877.1_2_7:1979960-1980038:-|nuORF	ENST00000437877.1_2_7:1979960-1980038:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	600.337158203125	2	600.335153	1198.65575	0.97496	0.0005853	-3.1335	-0.0018811	-2.1585	-0.0012958	600.3333001736194	93.972	2.6072	94.2	93.361	95.968	0.22863					134	62	3	0	0	0	0.65746	1	9631	9631		37.812	2.6595	1	602950			4199	11743	2819	2822	4747	4747					0.06437051360649093
DEVCFEMFV	9	Unmodified	_DEVCFEMFV_					0	0	0			REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3402709960938	2	559.730286	1117.44602	2.2454	0.0012568	-2.5645	-0.0014355	-0.31912	-0.00017862	559.728534459941	102.44	0.4101	102.7	102.44	102.85	0.26322					15	9	2	0	0	0	0.20789	1	12439	12439		38.806	18.809	1	107060	+		4200	30256	2820	2823	4748	4748					-0.10800650908345233
DEVDRPVAS	9	Unmodified	_DEVDRPVAS_					0	0	0			REV__ENSG00000112578|ENST00000230340|BYSL	REV__ENSG00000112578|ENST00000230340|BYSL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3009338378906	2	494.240721	986.466889	-0.6843	-0.00033821	-2.8902	-0.0014284	-3.5745	-0.0017666	494.2398851295883	97.181	0.16138	97.23	97.17	97.331	0.048157					5	3	2	0	0	0	0.20789	1	10330	10330		32.812	16.339	1	39720	+		4201	17954	2821	2824	4749	4749					-0.026886012128102266
DEVFGFVQTL	10	Unmodified	_DEVFGFVQTL_					0	0	0		nc|ENSG00000185513|Q9Y468-3|L3MBTL1;nc|ENSG00000185513|Q9Y468-2|L3MBTL1;nc|ENSG00000185513|Q9Y468-4|L3MBTL1;nc|ENSG00000185513|Q9Y468-1|L3MBTL1;nc|ENSG00000185513|Q9Y468|L3MBTL1;ENSG00000185513|ENST00000418998|L3MBTL1;ENST00000494117.1_1_20:42168615-42169765:+|nuORF	nc|ENSG00000185513|Q9Y468-3|L3MBTL1	nc|ENSG00000185513|Q9Y468-3|L3MBTL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.7905883789062	2	577.790047	1153.56554	0.021645	1.2506E-05	-3.2422	-0.0018733	-3.2205	-0.0018608	577.7880770174522	49.842	0.6616	50.687	50.313	50.974	0.84501					41	15	4	0	0	0	0.60985	1	4907	4907		49.536	1.8787	1	1350900			4202	7720	2822	2825	4750	4750					-0.005099979677424926
DEVGGEALGRL	11	Unmodified	_DEVGGEALGRL_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.2877197265625	2	558.288202	1114.56185	0.15134	8.449E-05	-0.12199	-6.8103E-05	0.029353	1.6387E-05	558.2881501365999	56.249	0.80859	56.646	56.394	57.203	0.39672					43	20	3	0	0	0	1.2294E-05	3	5799	5788;5799;5813		142.36	51.991	1	1872700		+	4203	8826;620	2823	2826	4751;4752;4753	4752					0.00915332258387025
DEVGGEALGRL	11	Unmodified	_DEVGGEALGRL_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.2884521484375	2	558.288202	1114.56185	0.37583	0.00020982	0.16453	9.1855E-05	0.54036	0.00030168	558.2880985699294	56.082	0.74506	56.641	56.395	57.141	0.55954					40	18	3	0	0	0	0.00046781	3	5797	5787;5797;5810		131.12	59.82	1	2357500		+	4204	8826;620	2823	2826	4754;4755;4756	4755					0.00915332258387025
DEVLVPVPLS	10	Unmodified	_DEVLVPVPLS_					0	0	0			REV__ENSG00000197442|ENST00000359015|MAP3K5	REV__ENSG00000197442|ENST00000359015|MAP3K5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.3031616210938	2	534.30279	1066.59103	-0.31695	-0.00016935	0.49316	0.00026349	0.17621	9.4149E-05	534.3029107286292	76.827	0.6277	77.395	77.077	77.704	0.56836					32	19	2	0	0	0	0.6116	1	8762	8762		49.442	6.5773	1	594010	+		4205	23231	2824	2827	4757	4757					0.06039476554656176
DEVMKETY	8	Unmodified	_DEVMKETY_					0	0	0			REV__ENSG00000090863|ENST00000422840|GLG1	REV__ENSG00000090863|ENST00000422840|GLG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	507.72650146484375	2	507.726058	1013.43756	-0.011027	-5.5987E-06	0.30183	0.00015325	0.29081	0.00014765	507.72602074388385	64.082	0.69483	64.048	63.709	64.404	-0.034256					34	19	3	0	0	0	0.87259	1	6093	6093		58.782	6.4828	1	205940	+		4206	16998	2825	2828	4758	4758					-0.06861881553311378
DEVQVRGQR	9	Unmodified	_DEVQVRGQR_					0	0	0			REV__ENSG00000197780|ENST00000338366|TAF13	REV__ENSG00000197780|ENST00000338366|TAF13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	543.787841796875	2	543.786161	1085.55777	-0.13722	-7.462E-05	3.6951	0.0020093	3.5578	0.0019347	543.7880009644933	33.057	0.747	33.06	32.762	33.509	0.0030785					35	16	3	0	0	0	0.19818	1	1889	1889		74.255	10.048	1	283920	+		4207	23269	2826	2829	4759	4759					0.018412875553167396
DEVRDEPSL	9	Unmodified	_DEVRDEPSL_					0	0	0			REV__ENSG00000140398|ENST00000355059|NEIL1	REV__ENSG00000140398|ENST00000355059|NEIL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2610473632812	2	530.251286	1058.48802	0.82692	0.00043848	-3.235	-0.0017154	-2.4081	-0.0012769	530.2493399949888	53.648	1.1661	54.062	53.581	54.747	0.4139					32	27	2	0	0	0	0.20789	1	5472	5472		54.776	0	1	382590	+		4208	19613	2827	2830	4760	4760					-0.038886359039452145
DEVRKEEW	8	Unmodified	_DEVRKEEW_					0	0	0		ENSG00000105851|ENST00000496166|PIK3CG	ENSG00000105851|ENST00000496166|PIK3CG	ENSG00000105851|ENST00000496166|PIK3CG	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.7608642578125	2	545.76182	1089.50909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.767	1	49.764	49.264	50.264	-0.0030327								0	0	0	0.29	1	4180	4180		53.351	8.9743	1				4209	2256	2828	2831	4761	4761					-0.03208625804450094
DEVRVLVYK	9	Unmodified	_DEVRVLVYK_					0	0	0			REV__ENST00000424426.1_1_6:49518739-49519689:+|nuORF	REV__ENST00000424426.1_1_6:49518739-49519689:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8201293945312	2	560.821681	1119.62881	-1.4169	-0.00079462	-1.874	-0.001051	-3.2909	-0.0018456	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.76764	1	9305	9305		34.173	3.8548	1	758020	+		4210	23213	2829	2832	4762	4762					0.07377987540121467
DEVRVRKK	8	Unmodified	_DEVRVRKK_					0	0	0			REV__ENST00000592491.1_3_19:5789163-5789688:-|nuORF	REV__ENST00000592491.1_3_19:5789163-5789688:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3134765625	2	515.311815	1028.60908	-0.66357	-0.00034194	-3.4853	-0.001796	-4.1489	-0.002138	515.3099504894494	58.588	1.2483	58.98	58.194	59.443	0.39209					90	29	4	0	0	0	0.91977	1	6194	6194		45.952	1.8352	1	3770900	+		4211	29214	2830	2833	4763	4763					0.09591656320048969
DEVSVVKV	8	Unmodified	_DEVSVVKV_					0	0	0			REV__ENSG00000151952|ENST00000422113|TMEM132D	REV__ENSG00000151952|ENST00000422113|TMEM132D	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26324462890625	2	437.74765	873.480748	0.055911	2.4475E-05	-0.7564	-0.00033111	-0.70049	-0.00030664	437.7474360747118	35.459	0.48718	35.399	35.118	35.605	-0.060337					25	15	3	0	0	0	0.4196	1	1888	1888		42.396	0	1	109490	+		4212	20280	2831	2834	4764	4764					0.038946762862906326
DEVTKDYMVI	10	Unmodified	_DEVTKDYMVI_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.7922973632812	2	606.794472	1211.57439	0.36314	0.00022035	-2.7509	-0.0016693	-2.3878	-0.0014489	606.7926939641687	79.695	0.84825	80.111	79.742	80.59	0.41621					54	19	4	0	0	0	0.4892	1	9142	9142		56.721	0	1	1157800			4213	5333	2832	2835	4765	4765					-0.022933923936079736
DEWDELPA	8	Unmodified	_DEWDELPA_					0	0	0		ENSG00000164659|ENST00000450689|ELAPOR2	ENSG00000164659|ENST00000450689|ELAPOR2	ENSG00000164659|ENST00000450689|ELAPOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7102355957031	2	487.708722	973.402892	-0.22938	-0.00011187	0.4141	0.00020196	0.18472	9.0088E-05	487.70867151631876	64.917	0.56174	64.882	64.524	65.086	-0.034798					23	15	2	0	0	0	0.86288	1	6223	6223		26.796	1.3459	1	104870			4214	5986	2833	2836	4766	4766					-0.08487381369752711
DEWMEKLNN	9	Unmodified	_DEWMEKLNN_					0	0	0		ENSG00000101193|ENST00000266069|GID8	ENSG00000101193|ENST00000266069|GID8	ENSG00000101193|ENST00000266069|GID8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.8009643554688	2	589.760963	1177.50737	-0.28145	-0.00016599	-2.4814	-0.0014635	-2.7629	-0.0016294	589.7594557356471	53.737	0.62875	54.322	53.914	54.543	0.58474					21	14	2	0	0	0	0.20789	1	5437	5437		32.812	0	1	516600			4215	1909	2834	2837	4767	4767					-0.07428002884671514
DEWTWLGLS	9	Unmodified	_DEWTWLGLS_					0	0	0			REV__ENST00000474787.1_1_9:139974763-139976621:+|nuORF	REV__ENST00000474787.1_1_9:139974763-139976621:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.7122192382812	2	553.761289	1105.50803	0.28249	0.00015643	-0.85136	-0.00047145	-0.56887	-0.00031502	553.76067683859	30.129	0.62175	30.086	29.92	30.542	-0.043095					18	14	2	0	0	0	0.20789	1	1620	1620		15.642	0	1	25317	+		4216	27311	2835	2838	4768	4768					-0.04050840173340475
DEYARYND	8	Unmodified	_DEYARYND_					0	0	0			REV__ENSG00000029559|ENST00000226284|IBSP	REV__ENSG00000029559|ENST00000226284|IBSP	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3038940429688	2	523.214703	1044.41485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.498	1	15.414	14.914	15.914	-0.083363								0	0	0	0.29264	1	48	48		29.15	6.1071	1		+		4217	16269	2836	2839	4769	4769					-0.10557764626560129
DEYATKMKY	9	Unmodified	_DEYATKMKY_					0	0	0			REV__ENST00000399720.4_1_4:49489055-49490575:-|nuORF	REV__ENST00000399720.4_1_4:49489055-49490575:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.7662963867188	2	574.768257	1147.52196	-0.52162	-0.00029981	0.04812	2.7658E-05	-0.4735	-0.00027215	574.7682046946875	49.221	2.3014	49.197	47.906	50.207	-0.024029					95	52	2	0	0	0	0.55097	1	4240	4240		49.442	1.7842	1	267810	+		4218	26234	2837	2840	4770	4770					-0.045899307365516506
DEYEQAFDI	9	Unmodified	_DEYEQAFDI_					0	0	0			REV__nc|ENSG00000048140|Q96FV3-2|TSPAN17	REV__nc|ENSG00000048140|Q96FV3-2|TSPAN17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.2650756835938	2	565.237844	1128.46113	-0.11217	-6.3404E-05	-2.5602	-0.0014471	-2.6724	-0.0015105	565.7386075384699	56.457	0.48387	56.854	56.632	57.116	0.39672					12	10	2	0	0	0	0.20789	1	5805	5805		16.473	0	1	109170	+		4219	29686	2838	2841	4771	4771					-0.09795744515145088
DEYSSSET	8	Unmodified	_DEYSSSET_					0	0	0		ENSG00000038219|ENST00000040738|BOD1L1	ENSG00000038219|ENST00000040738|BOD1L1	ENSG00000038219|ENST00000040738|BOD1L1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	459.171630859375	2	459.17217	916.329786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.573	1	37.515	37.015	38.015	-0.057915								0	0	0	0.29452	1	2160	2160		33.516	6.7195	1				4220	913	2839	2842	4772	4772					-0.13172554883010434
DEYWAHTRWHH	11	Unmodified	_DEYWAHTRWHH_					0	0	0		nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF	nc|ENSG00000001036|Q9BTY2-2|FUCA2	nc|ENSG00000001036|Q9BTY2-2|FUCA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.2922973632812	3	513.228841	1536.66469	0.64688	0.000332	-1.4426	-0.00074039	-0.79574	-0.0004084	513.5624163228895	53.991	0.58629	54.397	54.029	54.615	0.40663					22	13	2	0	0	0	0.18131	1	5471	5471		8.7993	0	1	324470			4221	10558	2840	2843	4773	4773					-0.0821716223031217
DFAYRYILK	9	Unmodified	_DFAYRYILK_					0	0	0			REV__nc|ENSG00000109184|Q92564-3|DCUN1D4	REV__nc|ENSG00000109184|Q92564-3|DCUN1D4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.3233032226562	2	594.824224	1187.63389	-0.61913	-0.00036827	-1.501	-0.00089283	-2.1201	-0.0012611	594.8220625497296	44.955	0.20847	45.418	45.304	45.513	0.46313					7	4	2	0	0	0	0.20789	1	4157	4157		45.952	19.889	1	121090	+		4222	29773	2841	2844	4774	4774					0.04758291402731629
DFCSSHQECH	10	Unmodified	_DFCSSHQECH_					0	0	0		ENSG00000204583|ENST00000376608|LRCOL1	ENSG00000204583|ENST00000376608|LRCOL1	ENSG00000204583|ENST00000376608|LRCOL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.7113647460938	2	596.710947	1191.40734	0.23738	0.00014165	-0.80263	-0.00047894	-0.56525	-0.00033729	596.7101927690849	27.922	0.59105	27.883	27.713	28.305	-0.038525					25	12	3	0	0	0	0.85466	1	1367	1367		20.947	7.1716	1	59923			4223	8463	2842	2845	4775	4775					-0.18070563490141467
DFDCPDHSD	9	Unmodified	_DFDCPDHSD_					0	0	0		ENSG00000168702|ENST00000389484|LRP1B	ENSG00000168702|ENST00000389484|LRP1B	ENSG00000168702|ENST00000389484|LRP1B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.1470336914062	2	525.677096	1049.33964	0.23276	0.00012236	0.94943	0.00049909	1.1822	0.00062145	525.6773825761161	31.437	0.74091	31.456	31.121	31.862	0.01836					21	16	2	0	0	0	0.20789	1	1669	1669		29.15	10.825	1	24627			4224	6428	2843	2846	4776	4776					-0.1830569014930461
DFDVAVVTF	9	Unmodified	_DFDVAVVTF_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.7528991699219	2	506.752933	1011.49131	1.4444	0.00073194	-1.449	-0.00073427	-0.004602	-2.3321E-06	506.75204042720367	98.5	2.1767	98.861	97.949	100.13	0.36137					121	53	5	0	0	0	0.38563	1	11843	11843		58.782	9.3404	1	5114500			4225	6838	2844	2847	4777	4777					-0.013973410592939217
DFDVAVVTF	9	Unmodified	_DFDVAVVTF_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.75274658203125	2	506.752933	1011.49131	2.3756	0.0012038	-2.553	-0.0012937	-0.17736	-8.9878E-05	506.7515182161224	98.592	3.0666	98.969	97.268	100.33	0.37679					111	75	2	0	0	0	0.38563	2	11916	11894;11916		58.782	14.251	1	6133500			4226	6838	2844	2847	4778;4779	4779					-0.013973410592939217
DFEKLLPHK	9	Unmodified	_DFEKLLPHK_					0	0	0		CON__Q3ZBD7	CON__Q3ZBD7	CON__Q3ZBD7	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	563.8128662109375	2	563.816399	1125.61824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.121	1	62.137	61.637	62.637	0.015724								0	0	0	0.29796	1	5415	5415		31.53	1.2121	1			+	4227	625	2845	2848	4780	4780					0.060460048857066795
DFFENEDD	8	Unmodified	_DFFENEDD_					0	0	0			REV__ENSG00000110048|ENST00000263847|OSBP	REV__ENSG00000110048|ENST00000263847|OSBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.682861328125	2	515.685444	1029.35634	0.022294	1.1497E-05	-2.5325	-0.001306	-2.5102	-0.0012945	515.6840336135236	27.99	0.67249	27.951	27.632	28.305	-0.038523					22	14	2	0	0	0	0.80706	1	1396	1396		19.36	1.995	1	42475	+		4228	17790	2846	2849	4781	4781					-0.15716865991703344
DFGIVVVPR	9	Unmodified	_DFGIVVVPR_					0	0	0		nc|ENSG00000157064|Q9BZQ4-2|NMNAT2;ENSG00000157064|ENST00000287713|NMNAT2	nc|ENSG00000157064|Q9BZQ4-2|NMNAT2	nc|ENSG00000157064|Q9BZQ4-2|NMNAT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.29034423828125	2	501.292559	1000.57057	-0.97974	-0.00049113	-3.1223	-0.0015652	-4.1021	-0.0020563	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.51307	1	8033	8033		51.335	16.183	1	2111000			4229	5409	2847	2850	4782	4782					0.07030350685522535
DFHYVLTT	8	Unmodified	_DFHYVLTT_					0	0	0		ENST00000318789.8_1_3:71008247-71008307:-|nuORF	ENST00000318789.8_1_3:71008247-71008307:-|nuORF	ENST00000318789.8_1_3:71008247-71008307:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.26678466796875	2	498.245275	994.475997	1.1297	0.00056287	-2.3496	-0.0011707	-1.2199	-0.00060782	498.24380317728367	27.666	0.52409	27.411	27.196	27.72	-0.25465					14	11	2	0	0	0	0.4196	1	1643	1643		35.201	3.2459	1	31388			4230	10012	2848	2851	4783	4783					-0.021462078564923104
DFKAGKALVI	10	Unmodified	_DFKAGKALVI_					0	0	0		nc|ENSG00000065548|Q8WU90-2|ZC3H15;ENSG00000065548|ENST00000337859|ZC3H15	nc|ENSG00000065548|Q8WU90-2|ZC3H15	nc|ENSG00000065548|Q8WU90-2|ZC3H15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.3190307617188	2	531.321317	1060.62808	0.78202	0.00041551	-4.4328	-0.0023553	-3.6508	-0.0019397	531.3186205937698	94.916	2.6028	95.079	94.616	97.219	0.16307					179	61	5	0	0	0	0.86589	1	9689	9689		29.15	5.6269	1	2661600			4231	1134	2849	2852	4784	4784					0.1001919289108173
DFLEYAAL	8	Unmodified	_DFLEYAAL_					0	0	0			REV__ENSG00000086200|ENST00000325324|IPO11	REV__ENSG00000086200|ENST00000325324|IPO11	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.234130859375	2	471.234376	940.454199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.168	1	73.722	73.222	74.222	0.55386								0	0	0	0.28381	1	8236	8236		54.765	0	1		+		4232	16908	2850	2853	4785	4785					-0.018410126050753206
DFLLLCFLAG	10	Unmodified	_DFLLLCFLAG_					0	0	0			REV__nc|ENSG00000176225|Q86VV8-3|RTTN	REV__nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.29541015625	2	556.296453	1110.57835	0.020707	1.1519E-05	3.5776	0.0019902	3.5984	0.0020018	556.2982403934259	75.405	0.62208	75.8	75.574	76.196	0.39507					30	14	3	0	0	0	0.50394	1	8515	8515		55.504	6.0627	1	508580	+		4233	22116	2851	2854	4786	4786					0.02748741890763995
DFLTFVKMT	9	Unmodified	_DFLTFVKMT_					0	0	0		ENST00000295112.13_1_2:55509501-55511570:+|nuORF;nc|ENSG00000293422|A6NEY8|PRORSD1P	ENST00000295112.13_1_2:55509501-55511570:+|nuORF	ENST00000295112.13_1_2:55509501-55511570:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.2830200195312	2	551.286085	1100.55762	-0.64318	-0.00035458	-2.8294	-0.0015598	-3.4726	-0.0019144	551.2844574783772	60.788	1.1006	60.775	60.038	61.139	-0.012203					50	33	2	0	0	0	0.73802	1	5624	5624		37.812	7.97	1	132100			4234	9714	2852	2855	4787	4787					0.011361515111047993
DFLVNHQPC	9	Unmodified	_DFLVNHQPC_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1;REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7459106445312	2	536.747659	1071.48076	-0.65993	-0.00035422	-2.9397	-0.0015779	-3.5996	-0.0019321	536.7459714608132	69.256	1.875	69.803	69.324	71.199	0.54694					117	48	5	0	0	0	0.76996	1	7715	7715		33.516	1.5607	1	5310600	+		4235	21140;17656	2853	2856	4788	4788					-0.05211646985367224
DFMKPKRLP	9	Oxidation (M)	_DFM(Oxidation (M))KPKRLP_		DFM(1)KPKRLP		DFM(44)KPKRLP	0	0	1		ENST00000521736.5_1_8:74652013-74654479:-|nuORF	ENST00000521736.5_1_8:74652013-74654479:-|nuORF	ENST00000521736.5_1_8:74652013-74654479:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3179931640625	2	574.318251	1146.62195	-1.3729	-0.0007885	3.5235	0.0020236	2.1506	0.0012351	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.64922	1	9762	9762		44.117	6.3053	1	1586900			4236	13175	2854	2857	4789	4789		196			0.05450351387912633
DFMTEHERK	9	Unmodified	_DFMTEHERK_					0	0	0		nc|ENSG00000165240|Q04656-5|ATP7A;ENSG00000165240|ENST00000341514|ATP7A;nc|ENSG00000165240|Q04656-2|ATP7A;nc|ENSG00000165240|Q04656-3|ATP7A;nc|ENSG00000165240|Q04656-4|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.25537109375	2	596.774405	1191.53426	-0.1354	-8.0801E-05	-4.3915	-0.0026207	-4.5269	-0.0027016	596.771375435627	73.566	0.4952	74.12	73.999	74.494	0.55386					18	12	2	0	0	0	0.72402	1	8297	8297		38.806	0.99462	1	380050			4237	6063	2855	2858	4790	4790					-0.053848942735157834
DFNEAKGVY	9	Unmodified	_DFNEAKGVY_					0	0	0		nc|ENSG00000196296|O14983-3|ATP2A1;ENSG00000196296|ENST00000395503|ATP2A1;nc|ENSG00000196296|O14983|ATP2A1	nc|ENSG00000196296|O14983-3|ATP2A1	nc|ENSG00000196296|O14983-3|ATP2A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	521.74462890625	2	521.745639	1041.47673	-0.26132	-0.00013634	-0.097567	-5.0905E-05	-0.35889	-0.00018725	521.745523614706	57.52	0.58964	57.554	57.273	57.862	0.033905					36	19	3	0	0	0	0.39977	1	5230	5230		57.811	0	1	195910			4238	8035	2856	2859	4791	4791					-0.04235413207425154
DFQCISNCHK	10	Unmodified	_DFQCISNCHK_					0	0	0			REV__ENSG00000129810|ENST00000412997|SGO1	REV__ENSG00000129810|ENST00000412997|SGO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.7532958984375	2	597.755158	1193.49576	-0.28658	-0.0001713	-0.39372	-0.00023535	-0.6803	-0.00040665	597.7549277115289	73.862	1.0699	74.25	74.041	75.11	0.38779					46	25	3	0	0	0	0.80179	1	8310	8310		39.253	0	1	1089800	+		4239	18834	2857	2860	4792	4792					-0.09324523179702737
DFQCQHRW	8	Unmodified	_DFQCQHRW_					0	0	0		nc|ENSG00000185697|P10243-2|MYBL1;ENSG00000185697|ENST00000522677|MYBL1	nc|ENSG00000185697|P10243-2|MYBL1	nc|ENSG00000185697|P10243-2|MYBL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.2476806640625	2	560.243075	1118.4716	0.98186	0.00055008	1.3979	0.00078318	2.3798	0.0013333	560.2437469662866	27.215	0.57136	27.188	26.893	27.464	-0.027706					29	15	2	0	0	0	0.90465	1	1237	1237		40.573	0	1	74056			4240	7735	2858	2861	4793	4793					-0.08289995551035645
DFRAQLAR	8	Unmodified	_DFRAQLAR_					0	0	0			REV__nc|ENSG00000178149|Q5D0E6-3|DALRD3	REV__nc|ENSG00000178149|Q5D0E6-3|DALRD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.76995849609375	2	488.769783	975.525013	1.2346	0.00060346	-1.4817	-0.00072421	-0.24706	-0.00012076	488.7688982981539	27.58	0.99786	27.326	26.767	27.765	-0.25465					51	22	4	0	0	0	0.47906	1	1618	1618		76.847	8.3619	1	613740	+		4241	22257	2859	2862	4794	4794					0.03627125223135863
DFRAQLAR	8	Unmodified	_DFRAQLAR_					0	0	0			REV__nc|ENSG00000178149|Q5D0E6-3|DALRD3	REV__nc|ENSG00000178149|Q5D0E6-3|DALRD3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	488.769783	975.525013	1.2346	0.00060346	-1.4817	-0.00072421	-0.24706	-0.00012076	488.7688982981539	27.58	0.99786	27.326	26.767	27.765	-0.25465	-0.027648	-0.00114	NaN	76.847	51	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	613740	+		4242	22257	2859	2862							0.03627125223135863
DFRLHEAPDNS	11	Unmodified	_DFRLHEAPDNS_					0	0	0		nc|ENSG00000149639|O94964-4|MTCL2;nc|ENSG00000149639|O94964-1|MTCL2;ENSG00000149639|ENST00000237536|SOGA1	nc|ENSG00000149639|O94964-4|MTCL2	nc|ENSG00000149639|O94964-4|MTCL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7795715332031	3	434.202069	1299.58438	-1.2983	-0.00056371	0.78398	0.0003404	-0.5143	-0.00022331	434.20250825783376	43.047	0.374	43.481	43.253	43.627	0.4334					10	8	2	0	0	0	0.17536	1	3855	3855		45.908	29.987	1	75974			4243	5042	2860	2863	4795	4795					-0.05343068343995583
DFRVLRVR	8	Unmodified	_DFRVLRVR_					0	0	0			REV__nc|ENSG00000110497|Q9C0C7-4|AMBRA1	REV__nc|ENSG00000110497|Q9C0C7-4|AMBRA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8170166015625	2	530.82235	1059.63015	1.1216	0.00059536	-3.6313	-0.0019276	-2.5097	-0.0013322	530.8203538418214	88.354	0.92792	88.803	88.435	89.363	0.44893					36	21	2	0	0	0	0.4196	1	10454	10454		29.15	0	1	1279700	+		4244	17819	2861	2864	4796	4796					0.10271666419566827
DFSCVGKKT	9	Unmodified	_DFSCVGKKT_					0	0	0		nc|ENSG00000147316|Q8NEM0-2|MCPH1;nc|ENSG00000147316|Q8NEM0-3|MCPH1;ENSG00000147316|ENST00000344683|MCPH1	nc|ENSG00000147316|Q8NEM0-2|MCPH1	nc|ENSG00000147316|Q8NEM0-2|MCPH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7491455078125	2	492.744585	983.474617	-0.12405	-6.1125E-05	0.53317	0.00026272	0.40912	0.00020159	492.74455797623875	81.725	0.58383	82.225	81.993	82.577	0.49966					18	14	2	0	0	0	0.20789	1	9461	9461		36.447	12.244	1	127390			4245	4896	2862	2865	4797	4797					-0.017781652168764595
DFTSFHGAGW	10	Unmodified	_DFTSFHGAGW_					0	0	0			REV__ENSG00000184956|ENST00000421673|MUC6	REV__ENSG00000184956|ENST00000421673|MUC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.7417602539062	2	562.743431	1123.47231	-1.1289	-0.00063527	-2.1315	-0.0011995	-3.2604	-0.0018348	562.7420463479946	37.258	0.58012	37.234	37.037	37.617	-0.023979					28	12	3	0	0	0	0.777	1	2454	2454		40.573	2.7611	1	139270	+		4246	22716	2863	2866	4798	4798					-0.08448877630326024
DFTSIDNPQ	9	Unmodified	_DFTSIDNPQ_					0	0	0			REV__chr17:61245371-61368327|35|116.51|0.08|10.57|+|2|BCAS3,BCAS3|1	REV__chr17:61245371-61368327|35|116.51|0.08|10.57|+|2|BCAS3,BCAS3|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8103637695312	2	518.732729	1035.4509	1.5174	0.00078713	-3.0219	-0.0015676	-1.5045	-0.00078042	518.7311301269302	98.587	0.53243	98.963	98.616	99.149	0.37679					21	12	2	0	0	0	0.20789	1	11898	11898		21.96	0	1	153260	+		4247	15660	2864	2867	4799	4799					-0.06540307449722604
DFTWHCLTF	9	Unmodified	_DFTWHCLTF_					0	0	0		ENST00000557385.1_1_X:119384768-119386573:+|nuORF	ENST00000557385.1_1_X:119384768-119386573:+|nuORF	ENST00000557385.1_1_X:119384768-119386573:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.2711181640625	2	585.257859	1168.50117	-0.7758	-0.00045404	2.8873	0.0016898	2.1115	0.0012358	585.2599157057949	80.818	0.33664	80.88	80.672	81.009	0.062225					14	7	2	0	0	0	0.20789	1	7937	7937		38.806	12.01	1	24842			4248	13771	2865	2868	4800	4800					-0.07634476325597461
DFTWHCLTF	9	Unmodified	_DFTWHCLTF_					0	0	0		ENST00000557385.1_1_X:119384768-119386573:+|nuORF	ENST00000557385.1_1_X:119384768-119386573:+|nuORF	ENST00000557385.1_1_X:119384768-119386573:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	585.257859	1168.50117	0.78755	0.00046092	0.78739	0.00046083	1.5749	0.00092175	585.2583252129217	80.795	0.26341	80.736	80.578	80.841	-0.059685	-0.072081	-0.001782	NaN	38.806	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30104			4249	13771	2865	2868							-0.07634476325597461
DFVLRVGIN	9	Unmodified	_DFVLRVGIN_					0	0	0		ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7931518554688	2	516.795466	1031.57638	-0.047501	-2.4548E-05	-3.81	-0.001969	-3.8575	-0.0019935	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.77244	1	8928	8928		32.812	0.85756	1	692890			4250	5998	2866	2869	4801	4801					0.06185449197187154
DFWKVKEF	8	Unmodified	_DFWKVKEF_					0	0	0		ENST00000471105.5_1_1:201965436-201974841:+|nuORF;ENSG00000176393|ENST00000295640|RNPEP	ENST00000471105.5_1_1:201965436-201974841:+|nuORF	ENST00000471105.5_1_1:201965436-201974841:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.7830200195312	2	549.784567	1097.55458	1.2732	0.0007	2.8622	0.0015736	4.1354	0.0022736	549.7860869616688	110.33	0.93375	110.36	110.1	111.04	0.031746					41	28	2	0	0	0	0.87922	1	12093	12093		31.955	4.0726	1	208930			4251	7076	2867	2870	4802	4802					0.009706444486027976
DFYHSKRRL	9	Unmodified	_DFYHSKRRL_					0	0	0		ENSG00000124762|ENST00000244741|CDKN1A	ENSG00000124762|ENST00000244741|CDKN1A	ENSG00000124762|ENST00000244741|CDKN1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3307495117188	2	611.327996	1220.64144	0.41561	0.00025408	1.8067	0.0011045	2.2223	0.0013585	611.3290637952541	78.627	1.0378	78.573	78.292	79.329	-0.053558					59	27	3	0	0	0	0.51307	1	7871	7871		51.335	0.14276	1	333110			4252	3357	2868	2871	4803	4803					0.03994443723036056
DGAAKRSK	8	Unmodified	_DGAAKRSK_					0	0	0			REV__nc|ENSG00000115464|Q70CQ2-3|USP34	REV__nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7367248535156	2	416.735409	831.456264	-0.50287	-0.00020956	4.189	0.0017457	3.6861	0.0015361	416.73707926585416	38.454	0.98293	38.977	38.513	39.496	0.52235					52	23	3	0	0	0	0.87792	1	3188	3188		31.53	4.8369	1	1833100	+		4253	18123	2869	2872	4804	4804					0.0337946092341781
DGALDSTPAL	10	Unmodified	_DGALDSTPAL_					0	0	0			REV__nc|ENSG00000167741|Q6P531-2|GGT6	REV__nc|ENSG00000167741|Q6P531-2|GGT6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.237548828125	2	480.237647	958.460741	0.31099	0.00014935	-0.50741	-0.00024368	-0.19642	-9.4329E-05	480.23734733400903	33.378	0.79589	33.59	33.228	34.024	0.21168					43	18	3	0	0	0	0.24032	1	2433	2433		79.451	15.917	1	886210	+		4254	21426	2870	2873	4805	4805					-0.020151194443315035
DGALPLLTF	9	Unmodified	_DGALPLLTF_					0	0	0			REV__ENST00000521369.2_1_8:107282449-107284274:+|nuORF	REV__ENST00000521369.2_1_8:107282449-107284274:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.7635498046875	2	473.765843	945.517133	-0.6507	-0.00030828	-3.5713	-0.001692	-4.222	-0.0020002	473.7640658991687	29.193	1.2558	29.164	28.65	29.906	-0.029207					55	28	3	0	0	0	0.14115	1	1808	1808		85.359	5.6469	1	1250200	+		4255	28117	2871	2874	4806	4806					0.04219553182997515
DGALPLLTF	9	Unmodified	_DGALPLLTF_					0	0	0			REV__ENST00000521369.2_1_8:107282449-107284274:+|nuORF	REV__ENST00000521369.2_1_8:107282449-107284274:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2349548339844	2	473.765843	945.517133	-0.6507	-0.00030828	-3.5713	-0.001692	-4.222	-0.0020002	473.7640658991687	29.193	1.2558	29.164	28.65	29.906	-0.029207					55	28	3	0	0	0	0.20789	1	1852	1852		35.618	0	1	1250200	+		4256	28117	2871	2874	4807	4807					0.04219553182997515
DGALPLLTF	9	Unmodified	_DGALPLLTF_					0	0	0			REV__ENST00000521369.2_1_8:107282449-107284274:+|nuORF	REV__ENST00000521369.2_1_8:107282449-107284274:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.76348876953125	2	473.765843	945.517133	-0.295	-0.00013976	-4.0103	-0.0018999	-4.3053	-0.0020397	473.7638393269968	29.315	0.94589	29.225	28.887	29.833	-0.089546					57	21	4	0	0	0	0.10807	1	1849	1849		90.777	16.802	1	1134800	+		4257	28117	2871	2874	4808	4808					0.04219553182997515
DGAQRDPLL	9	Unmodified	_DGAQRDPLL_					0	0	0		ENST00000594629.1_1_19:58382130-58400344:-|nuORF	ENST00000594629.1_1_19:58382130-58400344:-|nuORF	ENST00000594629.1_1_19:58382130-58400344:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.7590026855469	2	492.759081	983.503609	0.21633	0.0001066	0.02132	1.0506E-05	0.23765	0.0001171	492.75891451108805	18.952	0.47666	18.475	18.171	18.647	-0.47694					17	10	2	0	0	0	0.66686	1	459	459		42.864	2.0861	1	129600			4258	14318	2872	2875	4809	4809					0.01119695403770038
DGARRRAH	8	Unmodified	_DGARRRAH_					0	0	0		ENST00000330143.7_1_8:144373903-144375203:+|nuORF	ENST00000330143.7_1_8:144373903-144375203:+|nuORF	ENST00000330143.7_1_8:144373903-144375203:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.3266296386719	2	469.754998	937.495444	-0.10596	-4.9774E-05	-1.0382	-0.00048768	-1.1441	-0.00053745	469.7542862807882	56.27	0.56897	56.829	56.616	57.185	0.55954					18	12	2	0	0	0	0.4196	1	5792	5792		3.9852	0	1	458480			4259	10105	2873	2876	4810	4810					0.024196059976475226
DGCMHCDAD	9	Unmodified	_DGCMHCDAD_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.64031982421875	2	483.641145	965.267737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.87	1	117.9	117.4	118.4	0.026466								0	0	0	0.36199	1	12960	12960		7.6903	0.49693	1				4260	2871	2874	2877	4811	4811					-0.21628644099030225
DGEASSSKG	9	Unmodified	_DGEASSSKG_					0	0	0			REV__ENSG00000179300|ENST00000321110|RTL3	REV__ENSG00000179300|ENST00000321110|RTL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.18292236328125	2	419.182872	836.35119	0.44186	0.00018522	0.87126	0.00036522	1.3131	0.00055044	419.18312093882525	95.189	1.5012	95.608	94.89	96.391	0.41964					67	36	2	0	0	0	0.75725	1	11440	11440		36.447	1.246	1	742590	+		4261	22330	2875	2878	4812	4812					-0.07353125063650623
DGEASSSKG	9	Unmodified	_DGEASSSKG_					0	0	0			REV__ENSG00000179300|ENST00000321110|RTL3	REV__ENSG00000179300|ENST00000321110|RTL3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	419.182872	836.35119	0.44186	0.00018522	0.87126	0.00036522	1.3131	0.00055044	419.18312093882525	95.189	1.5012	95.608	94.89	96.391	0.41964	0.0097568	0.00073939	NaN	36.447	67	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	742590	+		4262	22330	2875	2878							-0.07353125063650623
DGEKLTSET	9	Unmodified	_DGEKLTSET_					0	0	0		ENSG00000182272|ENST00000329962|B4GALNT4;ENST00000530717.1_1_11:369803-372772:+|nuORF	ENSG00000182272|ENST00000329962|B4GALNT4	ENSG00000182272|ENST00000329962|B4GALNT4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.2364807128906	2	490.232561	978.45057	-1.4125	-0.00069245	2.8447	0.0013946	1.4322	0.00070212	490.2332922672592	57.463	0.8232	57.857	57.535	58.358	0.39407					36	20	2	0	0	0	0.20789	1	5965	5965		30.318	13.845	1	827460			4263	7444	2876	2879	4813	4813					-0.03951727169555852
DGERDKVE	8	Unmodified	_DGERDKVE_					0	0	0			REV__ENSG00000073910|ENST00000542859|FRY	REV__ENSG00000073910|ENST00000542859|FRY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	474.2231750488281	2	474.225071	946.435589	0.49089	0.00023279	-4.3301	-0.0020534	-3.8392	-0.0018207	474.2228867992903	68.938	0.71165	69.067	68.79	69.502	0.12838					54	30	3	0	0	0	0.89043	1	6228	6228		35.618	5.1146	1	323050	+		4264	16683	2877	2880	4814	4814					-0.039771742468929006
DGEVDMEE	8	Unmodified	_DGEVDMEE_					0	0	0		nc|ENSG00000107745|Q9BPX6-2|MICU1;ENSG00000107745|ENST00000361114|MICU1;nc|ENSG00000107745|Q9BPX6-3|MICU1;nc|ENSG00000107745|Q9BPX6-6|MICU1;nc|ENSG00000107745|Q9BPX6-5|MICU1;nc|ENSG00000107745|Q9BPX6-4|MICU1	nc|ENSG00000107745|Q9BPX6-2|MICU1	nc|ENSG00000107745|Q9BPX6-2|MICU1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.168701171875	2	462.168573	922.322592	0.94925	0.00043871	-0.18026	-8.3309E-05	0.769	0.00035541	462.168686326136	96.253	1.1964	96.658	96.34	97.536	0.40498					65	28	5	0	0	0	0.87064	1	11527	11527		29.15	3.6994	1	1414800			4265	2365	2878	2881	4815	4815					-0.14167610755100668
DGGCDEWFH	9	Unmodified	_DGGCDEWFH_					0	0	0		ENSG00000073614|ENST00000399788|KDM5A	ENSG00000073614|ENST00000399788|KDM5A	ENSG00000073614|ENST00000399788|KDM5A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	533.1917724609375	2	533.190174	1064.36579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.322	1	36.425	35.925	36.925	0.10306								0	0	0	0.32469	1	1995	1995		21.96	4.5949	1				4266	1294	2879	2882	4816	4816					-0.16381376187155183
DGGFLQPK	8	Unmodified	_DGGFLQPK_					0	0	0			REV__ENSG00000173421|ENST00000452691|IHO1	REV__ENSG00000173421|ENST00000452691|IHO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2269592285156	2	431.226885	860.439217	0.2459	0.00010604	0.35379	0.00015256	0.59969	0.0002586	431.22697269182805	25.663	1.9834	25.406	24.638	26.622	-0.25721					115	44	5	0	0	0	0.83456	1	1374	1374		60.972	4.2509	1	5038700	+		4267	21922	2880	2883	4817	4817					0.0034154031760635917
DGGFTVKTR	9	Unmodified	_DGGFTVKTR_					0	0	0		ENST00000564259.1_1_16:48382051-48395504:+|nuORF;nc|ENSG00000102910|Q86WA8-2|LONP2;ENSG00000102910|ENST00000285737|LONP2	ENST00000564259.1_1_16:48382051-48395504:+|nuORF	ENST00000564259.1_1_16:48382051-48395504:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.76373291015625	2	490.761623	979.508694	-0.27625	-0.00013557	0.46708	0.00022923	0.19083	9.3654E-05	490.76161664802436	19.481	0.56101	19.407	19.198	19.759	-0.073702					25	15	3	0	0	0	0.69624	1	420	420		40.778	1.972	1	49076			4268	2033	2881	2884	4818	4818					0.01811999266374187
DGGHLSGRG	9	Unmodified	_DGGHLSGRG_					0	0	0			REV__ENST00000311635.11_3_16:87362804-87362930:-|nuORF	REV__ENST00000311635.11_3_16:87362804-87362930:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3030090332031	2	428.207015	854.399478	-0.66647	-0.00028539	-3.6329	-0.0015556	-4.2994	-0.001841	428.20551913566095	62.699	0.64996	63.087	62.752	63.402	0.38779					22	14	2	0	0	0	0.20789	1	6680	6680		29.15	16.943	1	80721	+		4269	24910	2882	2885	4819	4819					-0.033545866330882745
DGGIKIIYLLL	11	Unmodified	_DGGIKIIYLLL_					0	0	0			REV__ENSG00000084073|ENST00000372759|ZMPSTE24	REV__ENSG00000084073|ENST00000372759|ZMPSTE24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.9211730957031	3	406.588313	1216.74311	2.8188	0.0011461	-4.4266	-0.0017998	-1.6078	-0.00065372	406.58643454203246	24.703	1.6586	24.666	24.201	25.86	-0.037178					110	42	4	0	0	0	0.71803	1	890	890		28.577	0.49524	1	337090	+		4270	16865	2883	2886	4820	4820					0.14340877302220179
DGGRGNEH	8	Unmodified	_DGGRGNEH_					0	0	0			REV__ENST00000339381.5_1_1:1266907-1267125:+|nuORF	REV__ENST00000339381.5_1_1:1266907-1267125:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.1807556152344	2	421.180998	840.347442	1.9424	0.00081809	-2.817	-0.0011865	-0.87463	-0.00036838	421.1800746062362	98.792	1.025	99.154	98.855	99.88	0.36137					50	25	3	0	0	0	0.8537	1	11911	11911		25.574	0.12388	1	772580	+		4271	25229	2884	2887	4821	4821					-0.07911750046855559
DGGRGNEH	8	Unmodified	_DGGRGNEH_					0	0	0			REV__ENST00000339381.5_1_1:1266907-1267125:+|nuORF	REV__ENST00000339381.5_1_1:1266907-1267125:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.1814270019531	2	421.180998	840.347442	-1.2937	-0.00054486	0.20877	8.7929E-05	-1.0849	-0.00045693	421.18157163521545	89.45	0.49945	89.921	89.64	90.139	0.47068					32	11	4	0	0	0	0.88185	1	10609	10609		32.812	0.85756	1	817620	+		4272	25229	2884	2887	4822	4822					-0.07911750046855559
DGGRGNEH	8	Unmodified	_DGGRGNEH_					0	0	0			REV__ENST00000339381.5_1_1:1266907-1267125:+|nuORF	REV__ENST00000339381.5_1_1:1266907-1267125:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.1811828613281	2	421.180998	840.347442	1.7498	0.00073698	-2.5526	-0.0010751	-0.80279	-0.00033812	421.18017939989363	98.873	0.70571	99.248	98.905	99.611	0.37554					37	17	3	0	0	0	0.90523	1	11955	11955		40.778	3.7497	1	793150	+		4273	25229	2884	2887	4823	4823					-0.07911750046855559
DGGRRGRRQR	10	Unmodified	_DGGRRGRRQR_					0	0	0		ENST00000458587.6_1_X:152989216-152989369:-|nuORF	ENST00000458587.6_1_X:152989216-152989369:-|nuORF	ENST00000458587.6_1_X:152989216-152989369:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.2267150878906	3	405.229287	1212.66603	-1.9262	-0.00078053	-3.6563	-0.0014816	-5.5825	-0.0022622	405.22779901784565	27.286	0.62692	27.354	27.093	27.72	0.068678					56	30	3	0	0	0	0.86446	1	1079	1079		30.569	3.5215	1	87420			4274	11990	2885	2888	4824	4824					0.06820516649099773
DGHAADGAR	9	Unmodified	_DGHAADGAR_					0	0	0			REV__ENST00000391694.4_1_19:58988585-58991546:+|nuORF	REV__ENST00000391694.4_1_19:58988585-58991546:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.19720458984375	2	435.196648	868.378742	1.3077	0.00056912	-1.4877	-0.00064742	-0.17993	-7.8303E-05	435.19568083899765	97.692	1.1588	98.077	97.557	98.716	0.38548					37	27	2	0	0	0	0.69624	1	11738	11738		40.778	5.1599	1	158360	+		4275	26004	2886	2889	4825	4825					-0.06071177012768203
DGICLLKIVS	10	Unmodified	_DGICLLKIVS_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8103637695312	2	530.807185	1059.59982	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.419	1	95.839	95.339	96.339	0.42051								0	0	0	0.45132	1	11414	11414		54.776	7.119	1				4276	14756	2887	2890	4826	4826					0.07240126919487011
DGIFKENN	8	Unmodified	_DGIFKENN_					0	0	0			REV__nc|ENSG00000152404|Q2TBE0-3|CWF19L2	REV__nc|ENSG00000152404|Q2TBE0-3|CWF19L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7231140136719	2	468.724707	935.43486	-0.013184	-6.1798E-06	-3.3225	-0.0015574	-3.3357	-0.0015635	468.7232380662735	77.148	2.5429	77.547	77.268	79.811	0.3997					145	61	5	0	0	0	0.88601	1	8780	8780		34.173	0.65696	1	15095000	+		4277	20295	2888	2891	4827	4827					-0.03543968895951366
DGIFKENN	8	Unmodified	_DGIFKENN_					0	0	0			REV__nc|ENSG00000152404|Q2TBE0-3|CWF19L2	REV__nc|ENSG00000152404|Q2TBE0-3|CWF19L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7230224609375	2	468.724707	935.43486	-1.2296	-0.00057635	-1.9244	-0.000902	-3.154	-0.0014784	468.7238369987016	86.792	1.5636	87.247	86.655	88.219	0.4543					99	37	4	0	0	0	0.87422	1	10256	10256		30.318	2.0634	1	4103600	+		4278	20295	2888	2891	4828	4828					-0.03543968895951366
DGIFKENN	8	Unmodified	_DGIFKENN_					0	0	0			REV__nc|ENSG00000152404|Q2TBE0-3|CWF19L2	REV__nc|ENSG00000152404|Q2TBE0-3|CWF19L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7239990234375	2	468.724707	935.43486	1.545	0.00072417	-4.2552	-0.0019945	-2.7102	-0.0012703	468.7225274565174	99.973	1.2778	100.32	99.78	101.06	0.3473					62	31	3	0	0	0	0.88185	2	12117	12117;12129		39.253	6.0163	1	1356300	+		4279	20295	2888	2891	4829;4830	4829					-0.03543968895951366
DGIGSTREP	9	Unmodified	_DGIGSTREP_					0	0	0			REV__ENST00000572285.5_1_17:7133284-7137536:-|nuORF	REV__ENST00000572285.5_1_17:7133284-7137536:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.22552490234375	2	466.227613	930.440674	-0.37216	-0.00017351	-3.3149	-0.0015455	-3.6871	-0.001719	466.2257410081479	78.872	0.89133	79.422	79.066	79.957	0.55032					62	20	5	0	0	0	0.78983	1	9079	9079		27.882	0.83493	1	1159300	+		4280	16071	2889	2892	4831	4831					-0.027328703842840696
DGIPLPVN	8	Unmodified	_DGIPLPVN_					0	0	0			REV__nc|ENSG00000112200|Q9Y4E5-4|ZNF451	REV__nc|ENSG00000112200|Q9Y4E5-4|ZNF451	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.19384765625	2	412.729261	823.443968	0.044401	1.8326E-05	0.99235	0.00040957	1.0367	0.0004279	412.72911093494616	82.121	0.72157	82.595	82.239	82.961	0.47383					23	17	2	0	0	0	0.4196	1	9568	9568		24.203	3.2558	1	180550	+		4281	29780	2890	2893	4832	4832					0.02518424460379265
DGIRRNLP	8	Unmodified	_DGIRRNLP_					0	0	0		ENST00000374270.7_1_9:114840952-114842376:-|nuORF	ENST00000374270.7_1_9:114840952-114842376:-|nuORF	ENST00000374270.7_1_9:114840952-114842376:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7688903808594	2	470.769783	939.525013	0.34379	0.00016185	-2.4863	-0.0011705	-2.1425	-0.0010086	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.92973	1	4274	4274		50.025	0.48849	1	1863100			4282	10771	2891	2894	4833	4833					0.052831252231385406
DGIRSAVCF	9	Unmodified	_DGIRSAVCF_					0	0	0		ENSG00000184194|ENST00000332582|GPR173	ENSG00000184194|ENST00000332582|GPR173	ENSG00000184194|ENST00000332582|GPR173	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.2361145019531	2	484.236927	966.459301	-0.75871	-0.00036739	-0.5484	-0.00026556	-1.3071	-0.00063295	484.2367477050762	85.41	1.1411	85.595	85.231	86.372	0.18523					85	26	5	0	0	0	0.51307	1	8327	8327		51.335	1.3109	1	7171700			4283	7587	2892	2895	4834	4834					-0.025270320140862168
DGKFELLN	8	Unmodified	_DGKFELLN_					0	0	0		ENSG00000117477|ENST00000367806|CCDC181;nc|ENSG00000117477|Q5TID7-2|CCDC181;nc|ENSG00000117477|Q5TID7-3|CCDC181	ENSG00000117477|ENST00000367806|CCDC181	ENSG00000117477|ENST00000367806|CCDC181	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.2448425292969	2	468.245275	934.475997	-1.7184	-0.00080463	0.58552	0.00027416	-1.1329	-0.00053046	468.24544693372513	105.87	0.94327	105.94	105.42	106.36	0.073112					61	23	4	0	0	0	0.88185	1	11256	11256		32.812	4.9302	1	1174400			4284	2980	2893	2896	4835	4835					0.006137921435197313
DGKKHILVI	9	Unmodified	_DGKKHILVI_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.8207092285156	2	511.821484	1021.62842	0.084132	4.306E-05	-1.1749	-0.00060134	-1.0908	-0.00055828	511.82074825057515	79.493	0.72359	79.91	79.614	80.338	0.41621					50	16	4	0	0	0	0.78058	1	9118	9118		30.504	2.6214	1	1233800			4285	5333	2894	2897	4836	4836					0.11846612610952434
DGKQNKRV	8	Unmodified	_DGKQNKRV_					0	0	0		nc|ENSG00000187950|Q7RTY7|OVCH1	nc|ENSG00000187950|Q7RTY7|OVCH1	nc|ENSG00000187950|Q7RTY7|OVCH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.76715087890625	2	472.76724	943.519927	-0.93004	-0.00043969	0.85085	0.00040225	-0.079188	-3.7437E-05	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.89494	1	8066	8066		37.159	4.3467	1	526610			4286	15167	2895	2898	4837	4837					0.04590821360523023
DGKSAKQN	8	Unmodified	_DGKSAKQN_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2189636230469	2	424.217049	846.419545	1.9084	0.00080956	1.8334	0.00077778	3.7418	0.0015873	424.21773029200483	100.79	1.277	101.09	100.26	101.54	0.2999					57	33	3	0	0	0	0.89494	1	12193	12193		37.159	5.2042	1	900380			4287	1742	2896	2899	4838	4838					-0.009808356931443996
DGKTKSLS	8	Unmodified	_DGKTKSLS_					0	0	0		ENSG00000168702|ENST00000389484|LRP1B	ENSG00000168702|ENST00000389484|LRP1B	ENSG00000168702|ENST00000389484|LRP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.2290954589844	2	418.229625	834.444697	2.7763	0.0011611	-2.0801	-0.00086995	0.69625	0.00029119	418.2285479248724	27.365	1.3218	27.337	26.934	28.255	-0.027704					47	33	3	0	0	0	0.90523	1	1225	1225		40.778	0	1	65913			4288	6428	2897	2900	4839	4839					0.020852191094377304
DGKVTVRR	8	Unmodified	_DGKVTVRR_					0	0	0		nc|ENSG00000183337|Q6W2J9-4|BCOR;nc|ENSG00000183337|Q6W2J9-2|BCOR;ENSG00000183337|ENST00000378444|BCOR	nc|ENSG00000183337|Q6W2J9-4|BCOR	nc|ENSG00000183337|Q6W2J9-4|BCOR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7771301269531	2	465.777608	929.540663	-1.4399	-0.00067067	1.3241	0.00061674	-0.1158	-5.3938E-05	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.88601	1	7461	7461		34.173	2.6427	1	287800			4289	15142	2898	2901	4840	4840					0.07307411740180214
DGLAPTCH	8	Unmodified	_DGLAPTCH_					0	0	0			REV__AluSx1_dup46174|chr7:130522874-130523137:+|1.1487858062526226|0.0974559312168593|3.56|60.0|9|3|sense	REV__AluSx1_dup46174|chr7:130522874-130523137:+|1.1487858062526226|0.0974559312168593|3.56|60.0|9|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.1838073730469	2	407.18162	812.348688	2.4545	0.00099941	1.62	0.00065963	4.0744	0.001659	407.1826090336494	96.976	1.3902	97.381	97.011	98.402	0.40498					85	33	5	0	0	0	0.92973	2	11627	11627;11662		50.025	7.5501	1	3412500	+		4290	15396	2899	2902	4841;4842	4841					-0.06499252002311096
DGLAPTCH	8	Unmodified	_DGLAPTCH_					0	0	0			REV__AluSx1_dup46174|chr7:130522874-130523137:+|1.1487858062526226|0.0974559312168593|3.56|60.0|9|3|sense	REV__AluSx1_dup46174|chr7:130522874-130523137:+|1.1487858062526226|0.0974559312168593|3.56|60.0|9|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.1838684082031	2	407.18162	812.348688	0.90789	0.00036968	3.3539	0.0013657	4.2618	0.0017353	407.183259835082	97.08	1.3079	97.471	97.073	98.381	0.39065					91	31	5	0	0	0	0.92973	1	11715	11715		50.025	3.2581	1	3974100	+		4291	15396	2899	2902	4843	4843					-0.06499252002311096
DGLCRPFF	8	Unmodified	_DGLCRPFF_					0	0	0			REV__ENST00000547760.1_3_14:31897374-31926552:-|nuORF	REV__ENST00000547760.1_3_14:31897374-31926552:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7285461425781	2	477.728738	953.442923	0.36854	0.00017606	-1.1127	-0.00053158	-0.74418	-0.00035552	477.7283055731362	97.887	2.0378	98.264	97.227	99.265	0.37679					128	49	5	0	0	0	0.9159	1	11802	11802		44.531	0.41427	1	10499000	+		4292	28559	2900	2903	4844	4844					-0.03566113180181674
DGLDPESE	8	Unmodified	_DGLDPESE_					0	0	0			REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.51300048828125	2	431.177255	860.339957	0.67122	0.00028941	2.5681	0.0011073	3.2393	0.0013967	431.17824625600565	22.664	0.29823	22.053	21.91	22.209	-0.6107					10	6	2	0	0	0	0.4196	1	928	928		18.324	0	1	52737	+		4293	18653	2901	2904	4845	4845					-0.09579947157794777
DGLIPRLSQ	9	Unmodified	_DGLIPRLSQ_					0	0	0			REV__nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	REV__nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	499.78375244140625	2	499.785099	997.555644	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.732	1	61.732	61.232	62.232	0								0	0	0	0.30613	1	5406	5406		42.396	0	1		+		4294	17938	2902	2905	4846	4846					0.05676858817525954
DGLLGDYS	8	Unmodified	_DGLLGDYS_					0	0	0			REV__ENSG00000268606|ENST00000684311|MAGEA2;REV__ENSG00000156009|ENST00000286482|MAGEA8	REV__ENSG00000268606|ENST00000684311|MAGEA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1913146972656	2	420.192708	838.370863	-0.017504	-7.3551E-06	-3.0933	-0.0012998	-3.1109	-0.0013072	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.90465	1	11306	11306		40.573	7.057	1	4147200	+		4295	22594;20461	2903	2906	4847	4847					-0.05478749052895182
DGLPECTH	8	Unmodified	_DGLPECTH_					0	0	0			REV__ENST00000500358.6_1_4:100054800-100075776:+|nuORF	REV__ENST00000500358.6_1_4:100054800-100075776:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.18621826171875	2	436.18436	870.354167	1.2907	0.000563	2.9543	0.0012886	4.2451	0.0018516	436.18570707398186	97.04	1.64	97.43	97.073	98.713	0.39065					78	39	5	0	0	0	0.91005	1	11707	11707		42.474	1.9018	1	1221700	+		4296	27806	2904	2907	4848	4848					-0.0861957321050113
DGLPECTH	8	Unmodified	_DGLPECTH_					0	0	0			REV__ENST00000500358.6_1_4:100054800-100075776:+|nuORF	REV__ENST00000500358.6_1_4:100054800-100075776:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.18524169921875	2	436.18436	870.354167	2.4896	0.0010859	1.8375	0.0008015	4.3271	0.0018874	436.18528994796645	100.53	0.76816	100.87	100.57	101.34	0.3459					37	18	3	0	0	0	0.88915	1	12226	12226		35.201	3.2459	1	402580	+		4297	27806	2904	2907	4849	4849					-0.0861957321050113
DGLPILAL	8	Unmodified	_DGLPILAL_					0	0	0		nc|ENSG00000181282|Q8NH89|OR5AK3P	nc|ENSG00000181282|Q8NH89|OR5AK3P	nc|ENSG00000181282|Q8NH89|OR5AK3P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2480163574219	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.86791	1	8916	8916		28.254	0	1	50007000			4298	15133	2905	2908	4850	4850					0.07228185499832307
DGLPRVQL	8	Unmodified	_DGLPRVQL_					0	0	0		ENST00000563441.5_1_15:75651254-75660924:-|nuORF;nc|ENSG00000140400|Q9NTJ4-3|MAN2C1;nc|ENSG00000140400|Q9NTJ4-2|MAN2C1;ENSG00000140400|ENST00000267978|MAN2C1;nc|ENSG00000140400|Q9NTJ4-4|MAN2C1	ENST00000563441.5_1_15:75651254-75660924:-|nuORF	ENST00000563441.5_1_15:75651254-75660924:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2607421875	2	449.261259	896.507966	-0.43537	-0.0001956	-1.0183	-0.0004575	-1.4537	-0.00065309	449.26067669224085	66.168	1.0089	66.554	66.153	67.162	0.38581					54	26	3	0	0	0	0.884	1	7185	7185		33.516	1.5607	1	1011600			4299	4431	2906	2909	4851	4851					0.055572046173210765
DGLRRGPGL	9	Unmodified	_DGLRRGPGL_					0	0	0			REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7691650390625	2	470.769783	939.525013	0.34379	0.00016185	-2.4863	-0.0011705	-2.1425	-0.0010086	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.58668	1	4259	4259		47.657	1.6851	1	1863100	+		4300	29761	2907	2910	4852	4852					0.052831252231385406
DGLRRGPGL	9	Unmodified	_DGLRRGPGL_					0	0	0			REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7691955566406	2	470.769783	939.525013	-0.46989	-0.00022121	-1.5944	-0.00075061	-2.0643	-0.00097182	470.768898093518	52.94	1.6168	52.866	52.471	54.088	-0.074509					101	42	3	0	0	0	0.64922	1	4367	4367		44.117	5.3107	1	1875900	+		4301	29761	2907	2910	4853	4853					0.052831252231385406
DGLRRGVVELT	11	Unmodified	_DGLRRGVVELT_					0	0	0			REV__chr11:65455581-65456638|55|12.33|0.35|5.13|+|2|TE_info:Charlie8,Charlie8_dup1923,hAT-Charlie,DNA,acceptor,+,65456638,65456979|FAUP4,None|1	REV__chr11:65455581-65456638|55|12.33|0.35|5.13|+|2|TE_info:Charlie8,Charlie8_dup1923,hAT-Charlie,DNA,acceptor,+,65456638,65456979|FAUP4,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5652770996094	3	405.566571	1213.67788	-0.18878	-7.6562E-05	-4.1815	-0.0016959	-4.3703	-0.0017724	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.72374	1	5889	5889		27.644	0.59661	1	257140	+		4302	15501	2908	2911	4854	4854					0.0795927582908007
DGLRVPRQ	8	Unmodified	_DGLRVPRQ_					0	0	0		nc|ENSG00000123243|Q86UX2|ITIH5;ENSG00000123243|ENST00000397146|ITIH5;nc|ENSG00000123243|Q86UX2-2|ITIH5	nc|ENSG00000123243|Q86UX2|ITIH5	nc|ENSG00000123243|Q86UX2|ITIH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7687072753906	2	470.769783	939.525013	-0.63239	-0.00029771	-1.0756	-0.00050635	-1.708	-0.00080406	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.89494	1	4779	4779		37.159	1.9584	1	1468500			4303	3266	2909	2912	4855	4855					0.052831252231385406
DGLTLQLV	8	Unmodified	_DGLTLQLV_					0	0	0			REV__CON__Q2KIU3	REV__CON__Q2KIU3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.7503356933594	2	429.750193	857.485833	-1.7422	-0.0007487	2.3085	0.00099207	0.56632	0.00024338	429.7510562737313	35.44	2.4929	35.471	35.255	37.748	0.031132					176	69	3	0	0	0	0.91472	3	1908	1855;1908;1916		51.335	3.4896	1	1409200	+	+	4304	16004	2910	2913	4856;4857;4858	4857					0.05138980148922201
DGLTLQLV	8	Unmodified	_DGLTLQLV_					0	0	0			REV__CON__Q2KIU3	REV__CON__Q2KIU3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.750244140625	2	429.750193	857.485833	-1.7334	-0.00074493	0.77902	0.00033479	-0.95437	-0.00041014	429.7503701051042	40.361	2.4974	40.367	40.029	42.526	0.0065002					186	77	3	0	0	0	0.87259	1	2542	2542		58.782	3.2778	1	3826800	+	+	4305	16004	2910	2913	4859	4859					0.05138980148922201
DGLTLQLV	8	Unmodified	_DGLTLQLV_					0	0	0			REV__CON__Q2KIU3	REV__CON__Q2KIU3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.750244140625	2	429.750193	857.485833	0.14732	6.3313E-05	0.46597	0.00020025	0.6133	0.00026357	429.7502450669041	35.27	2.574	35.376	35.139	37.713	0.10604					195	79	3	0	0	0	0.93293	1	1833	1833		51.335	0.14276	1	1419900	+	+	4306	16004	2910	2913	4860	4860					0.05138980148922201
DGLTLQLV	8	Unmodified	_DGLTLQLV_					0	0	0			REV__CON__Q2KIU3	REV__CON__Q2KIU3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.7503662109375	2	429.750193	857.485833	0.008359	3.5923E-06	0.60443	0.00025975	0.61279	0.00026335	429.7502794012024	35.489	2.8966	35.429	35.209	38.105	-0.060337					197	86	4	0	0	0	0.48059	2	1931	1931;1943		76.774	10.345	1	1630800	+	+	4307	16004	2910	2913	4861;4862	4861					0.05138980148922201
DGLTLQLV	8	Unmodified	_DGLTLQLV_					0	0	0			REV__CON__Q2KIU3	REV__CON__Q2KIU3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7505187988281	2	429.750193	857.485833	0.60427	0.00025969	0.37111	0.00015949	0.97539	0.00041917	429.75036736011566	34.927	1.9228	35.138	34.854	36.777	0.21003					152	48	4	0	0	0	0.53378	4	2684	2684;2696;2769;2782		74.255	7.9894	1	5113100	+	+	4308	16004	2910	2913	4863;4864;4865;4866	4863					0.05138980148922201
DGLVAPRGR	9	Unmodified	_DGLVAPRGR_					0	0	0		nc|ENSG00000160703|Q86UT6-2|NLRX1	nc|ENSG00000160703|Q86UT6-2|NLRX1	nc|ENSG00000160703|Q86UT6-2|NLRX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7704162597656	2	470.769783	939.525013	-1.0178	-0.00047915	-1.0022	-0.0004718	-2.02	-0.00095095	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.51307	1	4258	4258		51.335	3.6781	1	1648400			4309	15040	2911	2914	4867	4867					0.052831252231385406
DGLVENKKPSK	11	Unmodified	_DGLVENKKPSK_					0	0	0		nc|ENSG00000102904|Q2TAA8-2|TSNAXIP1;ENST00000466164.5_1_16:67859786-67861893:+|nuORF;ENST00000568990.5_1_16:67859786-67861893:+|nuORF;nc|ENSG00000102904|Q2TAA8|TSNAXIP1;ENSG00000102904|ENST00000561639|TSNAXIP1;ENST00000569504.5_1_16:67859786-67861483:+|nuORF	nc|ENSG00000102904|Q2TAA8-2|TSNAXIP1	nc|ENSG00000102904|Q2TAA8-2|TSNAXIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5646057128906	3	405.562827	1213.66665	1.5319	0.00062128	3.2091	0.0013015	4.741	0.0019228	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.69931	1	5891	5891		22.781	3.1544	1	245170			4310	2031	2912	2915	4868	4868					0.0683645373494528
DGLVHLPPV	9	Unmodified	_DGLVHLPPV_					0	0	0			REV__nc|ENSG00000141576|Q96PX1-2|RNF157	REV__nc|ENSG00000141576|Q96PX1-2|RNF157	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.9708251953125	2	473.77146	945.528367	-1.0099	-0.00047848	0.96235	0.00045593	-0.047596	-2.255E-05	473.77167964398575	50.447	0.57037	50.455	50.081	50.651	0.0077438					21	12	2	0	0	0	0.20789	1	4260	4260		18.324	0	1	188170	+		4311	19700	2913	2916	4869	4869					0.05342375277143674
DGLVKGPQ	8	Unmodified	_DGLVKGPQ_					0	0	0			REV__nc|ENSG00000097007|P00519-2|ABL1	REV__nc|ENSG00000097007|P00519-2|ABL1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2569580078125	2	407.226885	812.439217	-1.8805	-0.00076579	1.0955	0.00044613	-0.78497	-0.00031966	407.2266605453439	40.158	0.34684	40.158	39.931	40.278	0					12	8	2	0	0	0	0.4196	1	2615	2615		11.511	0	1	16539	+		4312	29733	2914	2917	4870	4870					0.025495403176250875
DGNSLQGY	8	Unmodified	_DGNSLQGY_					0	0	0			REV__ENSG00000149658|ENST00000370339|YTHDF1	REV__ENSG00000149658|ENST00000370339|YTHDF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3024597167969	2	427.187957	852.361361	0.43135	0.00018427	-2.6612	-0.0011368	-2.2298	-0.00095255	427.18793651888996	66.285	0.18742	66.671	66.547	66.735	0.38581					6	4	2	0	0	0	0.4196	1	7221	7221		40.573	1.7665	1	41780	+		4313	20190	2915	2918	4871	4871					-0.07072517338428952
DGNVRHLV	8	Unmodified	_DGNVRHLV_					0	0	0		ENSG00000171388|ENST00000429967|APLN	ENSG00000171388|ENST00000429967|APLN	ENSG00000171388|ENST00000429967|APLN	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.24896240234375	2	455.248683	908.482814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.808	1	52.784	52.284	53.284	-0.023849								0	0	0	0.29264	1	4687	4687		29.15	1.2673	1				4314	6662	2916	2919	4872	4872					0.024911498147503153
DGPPGPDGKE	10	Unmodified	_DGPPGPDGKE_					0	0	0			REV__ENSG00000081052|ENST00000396625|COL4A4	REV__ENSG00000081052|ENST00000396625|COL4A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7181701660156	2	484.719621	967.42469	1.6171	0.00078385	-4.4441	-0.0021542	-2.827	-0.0013703	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.73395	1	11568	11568		42.864	4.0581	1	7541600	+		4315	16816	2917	2920	4873	4873					-0.06032576621191765
DGPTLPILRQR	11	Unmodified	_DGPTLPILRQR_					0	0	0		ENSG00000170145|ENST00000304987|SIK2	ENSG00000170145|ENST00000304987|SIK2	ENSG00000170145|ENST00000304987|SIK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5816955566406	3	422.582333	1264.72517	-1.733	-0.00073233	0.89401	0.00037779	-0.83897	-0.00035453	422.5826240153895	97.352	3.8291	97.583	96.825	100.65	0.23103					216	89	4	0	0	0	0.732	1	10099	10099		18.332	2.411	1	506650			4316	6562	2918	2921	4874	4874					0.1033955510006308
DGPVCLCSM	9	Carbamidomethyl (C),Oxidation (M)	_DGPVCLC(Carbamidomethyl (C))SM(Oxidation (M))_	DGPVC(0.168)LC(0.832)SM	DGPVCLCSM(1)	DGPVC(-7)LC(7)SM	DGPVCLCSM(44)	0	1	1		ENST00000475415.5_1_7:2414943-2418434:+|nuORF	ENST00000475415.5_1_7:2414943-2418434:+|nuORF	ENST00000475415.5_1_7:2414943-2418434:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.19488525390625	2	499.193013	996.371474	1.0141	0.00050624	-1.2776	-0.00063776	-0.26347	-0.00013152	499.19249980997125	99.397	1.2635	99.73	99.417	100.68	0.33295					73	31	4	0	0	0	0.64922	1	12036	12036		44.117	14.967	2	1416900			4317	12321	2919	2922	4875	4875	154	190			-0.12685736991352314
DGQRAPLAN	9	Unmodified	_DGQRAPLAN_					0	0	0		nc|ENSG00000123901|Q9NYM4-2|GPR83;ENSG00000123901|ENST00000243673|GPR83	nc|ENSG00000123901|Q9NYM4-2|GPR83	nc|ENSG00000123901|Q9NYM4-2|GPR83	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	471.2427062988281	2	471.243598	940.472643	0.64062	0.00030189	-0.3352	-0.00015796	0.30542	0.00014393	471.2433603925791	85.886	4.3657	86.035	83.833	88.198	0.14884					167	101	2	0	0	0	0.64555	1	8388	8388		44.377	13.874	1	231870			4318	3293	2920	2923	4876	4876					2.5420895212846517E-05
DGQRVKLK	8	Unmodified	_DGQRVKLK_					0	0	0		ENSG00000172476|ENST00000304236|RAB40A;ENSG00000102128|ENST00000218249|RAB40AL	ENSG00000172476|ENST00000304236|RAB40A	ENSG00000172476|ENST00000304236|RAB40A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2890930175781	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.86288	1	10651	10651		26.796	1.3459	1	50843000			4319	1991	2921	2924	4877	4877					0.0874858239999412
DGQVQIYN	8	Unmodified	_DGQVQIYN_					0	0	0		nc|ENSG00000150893|Q5SZK8-2|FREM2	nc|ENSG00000150893|Q5SZK8-2|FREM2	nc|ENSG00000150893|Q5SZK8-2|FREM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7236328125	2	468.724707	935.43486	0.11016	5.1635E-05	-2.9585	-0.0013867	-2.8484	-0.0013351	468.7232430408737	87.316	0.58432	87.763	87.556	88.141	0.44628					25	13	2	0	0	0	0.89494	2	10262	10250;10262		42.396	7.3176	1	785520			4320	14988	2922	2925	4878;4879	4879					-0.03543968895951366
DGQVQIYN	8	Unmodified	_DGQVQIYN_					0	0	0		nc|ENSG00000150893|Q5SZK8-2|FREM2	nc|ENSG00000150893|Q5SZK8-2|FREM2	nc|ENSG00000150893|Q5SZK8-2|FREM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232666015625	2	468.724707	935.43486	-0.94379	-0.00044238	-1.8848	-0.00088346	-2.8286	-0.0013258	468.7236903113572	85.734	0.90586	86.181	85.782	86.688	0.44736					54	21	3	0	0	0	0.90983	1	10034	10034		42.396	3.59	1	829770			4321	14988	2922	2925	4880	4880					-0.03543968895951366
DGRLFMKS	8	Unmodified	_DGRLFMKS_					0	0	0			REV__nc|ENSG00000125743|P62316-2|SNRPD2	REV__nc|ENSG00000125743|P62316-2|SNRPD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	477.24676513671875	2	477.247295	952.480036	0.48847	0.00023312	-1.9411	-0.00092637	-1.4526	-0.00069325	477.24619345386253	68.431	1.3932	68.559	67.916	69.309	0.12839					120	53	3	0	0	0	0.88185	1	6132	6132		32.812	0.85756	1	594020	+		4322	15708	2923	2926	4881	4881					0.0018955836559371164
DGRNVWVL	8	Unmodified	_DGRNVWVL_					0	0	0			REV__ENST00000519724.1_1_8:71157374-71157476:-|nuORF	REV__ENST00000519724.1_1_8:71157374-71157476:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.7594299316406	2	479.758884	957.503215	0.71712	0.00034405	-1.2264	-0.00058836	-0.50924	-0.00024431	479.75815181939663	76.043	0.78616	76.438	76.077	76.863	0.39507					54	18	4	0	0	0	0.89043	1	8609	8609		35.618	1.4457	1	460820	+		4323	28087	2924	2927	4882	4882					0.022763204745729126
DGRRVPPL	8	Unmodified	_DGRRVPPL_					0	0	0		nc|ENSG00000130589|Q9BYK8|HELZ2;ENSG00000130589|ENST00000467148|HELZ2	nc|ENSG00000130589|Q9BYK8|HELZ2	nc|ENSG00000130589|Q9BYK8|HELZ2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.9641418457031	2	455.266876	908.519199	-1.4383	-0.00065481	-3.0374	-0.0013828	-4.4757	-0.0020376	455.2654118505115	40.302	1.1696	40.892	40.044	41.214	0.58915					51	29	2	0	0	0	0.4196	1	3416	3416		25.45	8.0852	1	1549500			4324	3658	2925	2928	4883	4883					0.06128026711462553
DGRWRRWRRRR	11	Unmodified	_DGRWRRWRRRR_					0	0	0		ENST00000396912.1_1_7:5085705-5085882:+|nuORF	ENST00000396912.1_1_7:5085705-5085882:+|nuORF	ENST00000396912.1_1_7:5085705-5085882:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.6485595703125	3	552.649068	1654.92537	-1.071	-0.00059189	0.95682	0.00052878	-0.11419	-6.3106E-05	552.6497041005003	59.904	0.53189	59.904	59.57	60.102	0					27	19	2	0	0	0	0.92084	1	5230	5230		1.3219	0.95051	1	68519			4325	11126	2926	2929	4884	4884					0.1241088733088418
DGSGPCRAHAD	11	Unmodified	_DGSGPCRAHAD_					0	0	0			REV__ENST00000433972.1_1_3:9885183-9885729:-|nuORF	REV__ENST00000433972.1_1_3:9885183-9885729:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.2227783203125	2	543.225079	1084.43561	0.52378	0.00028453	-3.2108	-0.0017442	-2.687	-0.0014596	543.2232350717135	26.042	0.74612	26.003	25.689	26.435	-0.038523					29	16	3	0	0	0	0.69248	1	1156	1156		32.751	6.0576	1	58266	+		4326	26659	2927	2930	4885	4885					-0.10323497518538716
DGSLTVAPLL	10	Unmodified	_DGSLTVAPLL_					0	0	0			REV__ENST00000540732.3_1_19:41930587-41930716:+|nuORF	REV__ENST00000540732.3_1_19:41930587-41930716:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.7264709472656	2	493.281857	984.549162	-0.63767	-0.00031455	1.3409	0.00066143	0.7032	0.00034687	493.2823623862532	80.42	0.59072	80.841	80.511	81.102	0.4215					24	13	3	0	0	0	0.37624	1	9240	9240		54.776	0	1	208990	+		4327	28469	2928	2931	4886	4886					0.056269208661547054
DGSPRTSLT	9	Unmodified	_DGSPRTSLT_					0	0	0		ENST00000585439.1_1_19:10446311-10450252:-|nuORF;ENST00000587992.1_1_19:10446311-10450332:-|nuORF;ENSG00000076662|ENST00000160262|ICAM3	ENST00000585439.1_1_19:10446311-10450252:-|nuORF	ENST00000585439.1_1_19:10446311-10450252:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2237548828125	2	467.235439	932.456324	-0.95129	-0.00044448	-3.4225	-0.0015991	-4.3738	-0.0020436	467.2337078119893	69.729	1.4716	69.765	69.399	70.87	0.035614					135	74	2	0	0	0	0.69624	1	6753	6753		40.778	3.6191	1	2912300			4328	1363	2929	2932	4887	4887					-0.012605838672243408
DGSRVHLLY	9	Unmodified	_DGSRVHLLY_					0	0	0		nc|ENSG00000204681|Q9UBS5-3|GABBR1;nc|ENSG00000204681|Q9UBS5-4|GABBR1;ENSG00000204681|ENST00000377034|GABBR1;nc|ENSG00000204681|Q9UBS5-2|GABBR1	nc|ENSG00000204681|Q9UBS5-3|GABBR1	nc|ENSG00000204681|Q9UBS5-3|GABBR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2799682617188	2	530.282723	1058.55089	-0.48747	-0.0002585	-4.3886	-0.0023272	-4.8761	-0.0025857	530.2810875098063	59.125	0.77987	59.118	58.652	59.432	-0.0074387					63	30	3	0	0	0	0.55097	1	5053	5053		49.442	5.0644	1	188850			4329	8477	2930	2933	4888	4888					0.0239597467477779
DGVHGGARW	9	Unmodified	_DGVHGGARW_					0	0	0		ENST00000510241.5_2_5:139943677-139944139:-|nuORF	ENST00000510241.5_2_5:139943677-139944139:-|nuORF	ENST00000510241.5_2_5:139943677-139944139:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.7286071777344	2	477.730658	953.446762	-1.6875	-0.00080617	-2.7285	-0.0013035	-4.416	-0.0021096	477.72916912562187	95.352	0.78807	95.555	95.232	96.02	0.20242					42	18	3	0	0	0	0.76764	1	9749	9749		34.173	7.3764	1	640610			4330	13005	2931	2934	4889	4889					-0.031823073621012554
DGVRKIIFA	9	Unmodified	_DGVRKIIFA_					0	0	0		nc|ENSG00000171723|Q9NQX3|GPHN;ENSG00000171723|ENST00000478722|GPHN	nc|ENSG00000171723|Q9NQX3|GPHN	nc|ENSG00000171723|Q9NQX3|GPHN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80352783203125	2	509.805834	1017.59712	-0.054506	-2.7787E-05	-4.0835	-0.0020818	-4.1381	-0.0021096	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.78536	1	8364	8364		29.15	2.3535	1	828920			4331	6701	2932	2935	4890	4890					0.08902039576844345
DGVSEAHRLK	10	Unmodified	_DGVSEAHRLK_					0	0	0			REV__ENSG00000163956|ENST00000650182|LRPAP1	REV__ENSG00000163956|ENST00000650182|LRPAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	556.296142578125	2	556.296362	1110.57817	0.27636	0.00015374	3.2377	0.0018011	3.514	0.0019548	556.2978932187805	68.74	0.54688	68.875	68.563	69.11	0.13522					37	22	2	0	0	0	0.70553	1	6184	6184		44.377	0	1	99761	+		4332	21003	2933	2936	4891	4891					0.027304582151373324
DGVVKRAVAS	10	Unmodified	_DGVVKRAVAS_					0	0	0		ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2904052734375	2	501.290548	1000.56654	-0.97974	-0.00049113	0.89004	0.00044617	-0.089695	-4.4963E-05	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.86272	1	7985	7985		24.519	0.31644	1	2111000			4333	5452	2934	2937	4892	4892					0.06628261191804086
DGVVKRAVAS	10	Unmodified	_DGVVKRAVAS_					0	0	0		ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.29058837890625	2	501.290548	1000.56654	-0.9424	-0.00047241	0.84818	0.00042518	-0.094216	-4.7229E-05	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.86587	1	8412	8412		29.17	2.4771	1	6939200			4334	5452	2934	2937	4893	4893					0.06628261191804086
DGVVKRAVAS	10	Unmodified	_DGVVKRAVAS_					0	0	0		ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29058837890625	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.86348	1	8727	8727		31.53	4.8369	1	9565500			4335	5452	2934	2937	4894	4894					0.06628261191804086
DGVVKRAVAS	10	Unmodified	_DGVVKRAVAS_					0	0	0		ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29046630859375	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.70553	2	9100	8920;9100		44.377	2.2742	1	9883700			4336	5452	2934	2937	4895;4896	4896					0.06628261191804086
DGVVKRAVAS	10	Unmodified	_DGVVKRAVAS_					0	0	0		ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.29034423828125	2	501.290548	1000.56654	-1.5697	-0.00078686	1.3648	0.00068414	-0.20492	-0.00010273	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.76096	1	8778	8778		41.427	4.9799	1	9242300			4337	5452	2934	2937	4897	4897					0.06628261191804086
DGYLEVIGF	9	Unmodified	_DGYLEVIGF_					0	0	0		nc|ENSG00000149091|Q13574-6|DGKZ;ENSG00000149091|ENST00000456247|DGKZ;nc|ENSG00000149091|Q13574-4|DGKZ;nc|ENSG00000149091|Q13574-7|DGKZ;nc|ENSG00000149091|Q13574-5|DGKZ;nc|ENSG00000149091|Q13574-3|DGKZ;nc|ENSG00000149091|Q13574-1|DGKZ;ENST00000528173.5_1_11:46391373-46400221:+|nuORF;ENST00000531879.5_1_11:46367016-46400221:+|nuORF	nc|ENSG00000149091|Q13574-6|DGKZ	nc|ENSG00000149091|Q13574-6|DGKZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.75341796875	2	506.752933	1011.49131	1.6242	0.00082308	-0.12498	-6.3335E-05	1.4992	0.00075974	506.7519441995842	102.21	1.1478	102.47	101.73	102.88	0.26322					46	28	3	0	0	0	0.69624	1	12401	12401		40.778	0	1	529330			4338	4995	2935	2938	4898	4898					-0.01397341059282553
DGYLEVIGF	9	Unmodified	_DGYLEVIGF_					0	0	0		nc|ENSG00000149091|Q13574-6|DGKZ;ENSG00000149091|ENST00000456247|DGKZ;nc|ENSG00000149091|Q13574-4|DGKZ;nc|ENSG00000149091|Q13574-7|DGKZ;nc|ENSG00000149091|Q13574-5|DGKZ;nc|ENSG00000149091|Q13574-3|DGKZ;nc|ENSG00000149091|Q13574-1|DGKZ;ENST00000528173.5_1_11:46391373-46400221:+|nuORF;ENST00000531879.5_1_11:46367016-46400221:+|nuORF	nc|ENSG00000149091|Q13574-6|DGKZ	nc|ENSG00000149091|Q13574-6|DGKZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.7532653808594	2	506.752933	1011.49131	3.6378	0.0018435	-3.2803	-0.0016623	0.35755	0.00018119	506.75081779142084	102.19	0.67956	102.49	102.22	102.9	0.29864					32	15	3	0	0	0	0.51307	1	12452	12452		51.335	0	1	713010			4339	4995	2935	2938	4899	4899					-0.01397341059282553
DGYTMITSG	9	Unmodified	_DGYTMITSG_					0	0	0		ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.7081604003906	2	472.705125	943.395698	3.0948	0.0014629	1.7682	0.00083582	4.8629	0.0022987	472.7059613501473	105.23	0.61919	105.42	105.12	105.74	0.19079					22	14	2	0	0	0	0.78983	1	12869	12869		27.882	4.8455	1	110270			4340	4081	2936	2939	4900	4900					-0.07826437241828899
DGYYNEQCES	10	Unmodified	_DGYYNEQCES_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.7244567871094	3	403.145121	1206.41353	0.40713	0.00016413	-0.96621	-0.00038952	-0.55907	-0.00022539	403.1446951721041	64.592	0.59032	64.716	64.389	64.98	0.12397					23	18	2	0	0	0	0.37624	1	5693	5693		26.063	15.477	1	86626	+		4341	17006	2937	2940	4901	4901					-0.18141766777648627
DHACIPIKP	9	Unmodified	_DHACIPIKP_					0	0	0		chr19:3978396-3979329|23|11.48|0.64|4.17|-|0|None,EEF2|1	chr19:3978396-3979329|23|11.48|0.64|4.17|-|0|None,EEF2|1	chr19:3978396-3979329|23|11.48|0.64|4.17|-|0|None,EEF2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.75927734375	2	497.262945	992.511337	-0.95902	-0.00047689	-1.1378	-0.00056579	-2.0968	-0.0010427	497.2624829507844	43.87	0.44455	43.836	43.623	44.067	-0.033474					15	10	2	0	0	0	0.7932	1	3475	3475		24.203	1.1603	1	80088			4342	276	2938	2941	4902	4902					0.014781313996877543
DHACIPIKP	9	Unmodified	_DHACIPIKP_					0	0	0		chr19:3978396-3979329|23|11.48|0.64|4.17|-|0|None,EEF2|1	chr19:3978396-3979329|23|11.48|0.64|4.17|-|0|None,EEF2|1	chr19:3978396-3979329|23|11.48|0.64|4.17|-|0|None,EEF2|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	497.262945	992.511337	-1.9313	-0.00096036	-0.41792	-0.00020781	-2.3492	-0.0011682	497.2628838664525	43.833	0.58998	43.83	43.541	44.131	-0.0024452	-0.0031083	0.00042164	NaN	24.203	17	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61143			4343	276	2938	2941							0.014781313996877543
DHALFCQFP	9	Unmodified	_DHALFCQFP_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.24169921875	2	539.244752	1076.47495	-0.18037	-9.7262E-05	-4.3063	-0.0023221	-4.4867	-0.0024194	539.2422804629531	62.076	0.71587	62.066	61.697	62.413	-0.0094147					58	29	3	0	0	0	0.35373	1	5757	5757		60.972	7.6205	1	516380	+		4344	18092	2939	2942	4903	4903					-0.06022745497011783
DHALFCQFP	9	Unmodified	_DHALFCQFP_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.2431030273438	2	539.244752	1076.47495	-0.49303	-0.00026586	-4.1471	-0.0022363	-4.6401	-0.0025021	539.2423567514398	61.882	0.81338	61.912	61.473	62.287	0.029579					71	34	3	0	0	0	0.35373	1	5754	5754		60.972	0.67798	1	661710	+		4345	18092	2939	2942	4904	4904					-0.06022745497011783
DHALFCQFP	9	Unmodified	_DHALFCQFP_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	539.244752	1076.47495	-1.1098	-0.00059846	-2.6757	-0.0014429	-3.7855	-0.0020413	539.2431805334498	62.033	0.41284	62.033	61.864	62.277	0	0.051981	0.0018303	NaN	60.972	28	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95696	+		4346	18092	2939	2942							-0.06022745497011783
DHALLQLQ	8	Unmodified	_DHALLQLQ_					0	0	0			REV__ENSG00000166341|ENST00000299441|DCHS1	REV__ENSG00000166341|ENST00000299441|DCHS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	469.25860595703125	2	469.258717	936.50288	-0.28783	-0.00013506	0.62934	0.00029532	0.34151	0.00016026	469.25892183391403	25.64	0.64706	25.599	25.332	25.979	-0.04117					41	17	3	0	0	0	0.884	1	1089	1089		33.516	1.5607	1	153890	+		4347	21281	2940	2943	4905	4905					0.0320890075471425
DHAWSWLY	8	Unmodified	_DHAWSWLY_					0	0	0		nc|ENSG00000133895|O00255-3|MEN1	nc|ENSG00000133895|O00255-3|MEN1	nc|ENSG00000133895|O00255-3|MEN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.242431640625	2	539.243067	1076.47158	-0.18037	-9.7262E-05	-1.1808	-0.00063674	-1.3612	-0.000734	539.2422804629531	62.076	0.71587	62.066	61.697	62.413	-0.0094147					58	29	3	0	0	0	0.88944	1	5736	5736		57.811	7.7867	1	516380			4348	14930	2941	2944	4906	4906					-0.06359672279381812
DHAWSWLY	8	Unmodified	_DHAWSWLY_					0	0	0		nc|ENSG00000133895|O00255-3|MEN1	nc|ENSG00000133895|O00255-3|MEN1	nc|ENSG00000133895|O00255-3|MEN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.2431030273438	2	539.243067	1076.47158	0.82613	0.00044549	-2.2984	-0.0012394	-1.4722	-0.00079389	539.2416577167436	61.906	0.75049	61.873	61.511	62.261	-0.033169					56	28	3	0	0	0	0.67263	2	5860	5860;5882		68.485	17.898	1	574740			4349	14930	2941	2944	4907;4908	4907					-0.06359672279381812
DHAWSWLY	8	Unmodified	_DHAWSWLY_					0	0	0		nc|ENSG00000133895|O00255-3|MEN1	nc|ENSG00000133895|O00255-3|MEN1	nc|ENSG00000133895|O00255-3|MEN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.2431640625	2	539.243067	1076.47158	-0.49303	-0.00026586	-1.0216	-0.00055087	-1.5146	-0.00081674	539.2423567514398	61.882	0.81338	61.912	61.473	62.287	0.029579					71	34	3	0	0	0	0.84634	1	5795	5795		60.294	14.342	1	661710			4350	14930	2941	2944	4909	4909					-0.06359672279381812
DHAWSWLY	8	Unmodified	_DHAWSWLY_					0	0	0		nc|ENSG00000133895|O00255-3|MEN1	nc|ENSG00000133895|O00255-3|MEN1	nc|ENSG00000133895|O00255-3|MEN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.243896484375	2	539.243067	1076.47158	0.01069	5.7646E-06	-1.3954	-0.00075245	-1.3847	-0.00074668	539.2422023240468	61.908	0.64518	62.016	61.631	62.276	0.10743					51	28	3	0	0	0	0.60155	1	5408	5408		71.378	27.261	1	504150			4351	14930	2941	2944	4910	4910					-0.06359672279381812
DHCLCLVLY	9	Unmodified	_DHCLCLVLY_					0	0	0		ENST00000528307.5_1_11:14535957-14539209:-|nuORF	ENST00000528307.5_1_11:14535957-14539209:-|nuORF	ENST00000528307.5_1_11:14535957-14539209:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.7570190429688	2	539.756638	1077.49872	-1.3334	-0.00071971	0.8182	0.00044163	-0.5152	-0.00027808	539.7567988116976	29.655	0.606	29.626	29.3	29.906	-0.029207					30	13	3	0	0	0	0.76402	1	1877	1877		35.201	6.0512	1	328180			4352	13298	2942	2945	4911	4911					-0.0369264805488001
DHCLHSDSL	9	Unmodified	_DHCLHSDSL_					0	0	0			REV__ENST00000493734.5_1_22:20749431-20759943:+|nuORF	REV__ENST00000493734.5_1_22:20749431-20759943:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.716796875	2	513.719098	1025.42364	0.29617	0.00015215	-3.9269	-0.0020173	-3.6307	-0.0018652	513.7168946108734	78.116	0.54802	78.066	77.854	78.402	-0.050797					29	18	2	0	0	0	0.72402	1	7765	7765		38.806	6.8513	1	114550	+		4353	27701	2943	2946	4912	4912					-0.0880511426173598
DHDLAYVMGM	10	Oxidation (M)	_DHDLAYVMGM(Oxidation (M))_		DHDLAYVM(0.003)GM(0.997)		DHDLAYVM(-26)GM(26)	0	0	1			REV__nc|ENSG00000138798|P01133-2|EGF	REV__nc|ENSG00000138798|P01133-2|EGF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.2438354492188	2	584.244092	1166.47363	-1.7222	-0.0010062	1.574	0.0009196	-0.14819	-8.658E-05	584.2448524221044	60.063	1.1625	60.453	60.095	61.257	0.39077					80	31	3	0	0	0	0.47599	2	6336	6336;6390		57.811	16.386	2	4634700	+		4354	19508	2944	2947	4913;4914	4913		289			-0.10294747648094926
DHDLAYVMGM	10	Oxidation (M)	_DHDLAYVMGM(Oxidation (M))_		DHDLAYVM(0.093)GM(0.907)		DHDLAYVM(-9.9)GM(9.9)	0	0	1			REV__nc|ENSG00000138798|P01133-2|EGF	REV__nc|ENSG00000138798|P01133-2|EGF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.2435913085938	2	584.244092	1166.47363	-0.91097	-0.00053223	0.6539	0.00038203	-0.25707	-0.00015019	584.2443398968256	59.966	1.1406	60.519	60.119	61.26	0.55323					79	30	3	0	0	0	0.47599	2	6350	6350;6374		57.811	11.859	2	4658100	+		4355	19508	2944	2947	4915;4916	4915		289			-0.10294747648094926
DHDPQRRFDDY	11	Unmodified	_DHDPQRRFDDY_					0	0	0			REV__ENSG00000183354|ENST00000399933|KIAA2026	REV__ENSG00000183354|ENST00000399933|KIAA2026	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7322692871094	3	488.548128	1462.62255	0.0044717	2.1847E-06	-0.56556	-0.0002763	-0.56109	-0.00027412	488.54766282483246	55.252	0.41853	55.82	55.573	55.992	0.56836					15	9	2	0	0	0	0.18028	1	5696	5696		10.104	1.3046	1	228860	+		4356	22601	2945	2948	4917	4917					-0.09025182429331835
DHEIINCSNC	10	Carbamidomethyl (C)	_DHEIINC(Carbamidomethyl (C))SNC_	DHEIINC(0.982)SNC(0.018)		DHEIINC(17)SNC(-17)		0	1	0		nc|ENSG00000123473|Q15468|STIL;ENSG00000123473|ENST00000371877|STIL	nc|ENSG00000123473|Q15468|STIL	nc|ENSG00000123473|Q15468|STIL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.7416381835938	2	602.739705	1203.46486	1.2536	0.00075561	2.3682	0.0014274	3.6218	0.002183	602.740947907369	85.029	0.95467	84.957	84.498	85.453	-0.07196					58	21	4	0	0	0	0.54701	1	8725	8725		52.937	6.9645	2	406200			4357	3275	2946	2949	4918	4918	40				-0.12873721284563544
DHFCEEEGQD	10	Unmodified	_DHFCEEEGQD_					0	0	0			REV__ENSG00000113312|ENST00000231238|TTC1	REV__ENSG00000113312|ENST00000231238|TTC1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.7109375	2	604.711667	1207.40878	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.56	1	118.49	117.99	118.99	-0.07531								0	0	0	0.45132	1	12723	12723		9.7057	1.012	1		+		4358	17989	2947	2950	4919	4919					-0.18662650920396118
DHGPLWAART	10	Unmodified	_DHGPLWAART_					0	0	0			REV__ENST00000561069.5_1_15:29409547-29409850:+|nuORF	REV__ENST00000561069.5_1_15:29409547-29409850:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	562.2861328125	2	562.285797	1122.55704	-0.40654	-0.00022859	-0.76529	-0.00043031	-1.1718	-0.0006589	562.2850640587922	50.302	0.73635	50.278	49.944	50.68	-0.02343					32	16	3	0	0	0	0.82886	1	4383	4383		37.812	4.2959	1	216280	+		4359	28776	2948	2951	4920	4920					0.0006649290628502058
DHGVPSDPGG	10	Unmodified	_DHGVPSDPGG_					0	0	0		nc|ENSG00000179295|Q06124-3|PTPN11;ENSG00000179295|ENST00000351677|PTPN11;nc|ENSG00000179295|Q06124-1|PTPN11	nc|ENSG00000179295|Q06124-3|PTPN11	nc|ENSG00000179295|Q06124-3|PTPN11	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.205322265625	2	469.204138	936.393724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.66	1	104.89	104.39	105.39	0.2268								0	0	0	0.45132	1	12787	12787		27.882	3.6795	1				4360	7262	2949	2952	4921	4921					-0.07701729935411095
DHHGCLVG	8	Unmodified	_DHHGCLVG_					0	0	0		ENST00000511537.1_1_11:43284173-43284311:-|nuORF	ENST00000511537.1_1_11:43284173-43284311:-|nuORF	ENST00000511537.1_1_11:43284173-43284311:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.29736328125	2	419.187237	836.359921	-0.68571	-0.00028744	-3.4284	-0.0014372	-4.1141	-0.0017246	419.18554575089695	72.531	0.42675	72.491	72.246	72.672	-0.040382					23	16	2	0	0	0	0.4196	1	7067	7067		37.028	23.253	1	32105			4361	13021	2950	2953	4922	4922					-0.06480429908174301
DHIQASGTCQ	10	Unmodified	_DHIQASGTCQ_					0	0	0		ENST00000467100.1_1_9:133454530-133454824:+|nuORF	ENST00000467100.1_1_9:133454530-133454824:+|nuORF	ENST00000467100.1_1_9:133454530-133454824:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2285766601562	2	530.22983	1058.44511	0.80248	0.0004255	-3.9036	-0.0020698	-3.1011	-0.0016443	530.2276638551339	29.573	1.0489	29.557	29.281	30.33	-0.015167					72	29	4	0	0	0	0.85981	1	1516	1516		35.152	1.6364	1	294480			4362	12145	2951	2954	4923	4923					-0.0817772923303437
DHKKGTKN	8	Unmodified	_DHKKGTKN_					0	0	0			REV__ENSG00000136866|ENST00000374227|ZFP37	REV__ENSG00000136866|ENST00000374227|ZFP37	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2534484863281	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.8537	1	8411	8411		25.574	1.07	1	1482000	+		4363	19342	2952	2955	4924	4924					0.027191324691784757
DHKRDLGG	8	Unmodified	_DHKRDLGG_					0	0	0		nc|ENSG00000160179|P45844-7|ABCG1;nc|ENSG00000160179|P45844-6|ABCG1;nc|ENSG00000160179|P45844-5|ABCG1;ENSG00000160179|ENST00000398449|ABCG1;nc|ENSG00000160179|P45844-3|ABCG1;nc|ENSG00000160179|P45844-2|ABCG1;nc|ENSG00000160179|P45844|ABCG1;ENST00000472587.5_1_21:43696971-43716499:+|nuORF;nc|ENSG00000160179|P45844-8|ABCG1	nc|ENSG00000160179|P45844-7|ABCG1	nc|ENSG00000160179|P45844-7|ABCG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2308654785156	2	449.230491	896.446428	0.59617	0.00026782	-0.42374	-0.00019036	0.17243	7.7459E-05	449.2302610410389	83.151	3.4859	83.298	82.027	85.513	0.14694					178	80	3	0	0	0	0.87922	1	8159	8159		31.955	1.4512	1	225870			4364	5558	2953	2956	4925	4925					-0.0059372708195724044
DHKSDSHKAED	11	Unmodified	_DHKSDSHKAED_					0	0	0			REV__ENSG00000048405|ENST00000265827|ZNF800	REV__ENSG00000048405|ENST00000265827|ZNF800	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.7763061523438	2	634.77873	1267.54291	-0.77864	-0.00049427	-1.1548	-0.00073302	-1.9334	-0.0012273	634.7779253510707	50.329	1.0292	50.329	49.705	50.734	0					42	24	3	0	0	0	0.59499	1	4023	4023		45.022	2.1579	1	100280	+		4365	16365	2954	2957	4926	4926					-0.08016249103343398
DHKSDSHKAED	11	Unmodified	_DHKSDSHKAED_					0	0	0			REV__ENSG00000048405|ENST00000265827|ZNF800	REV__ENSG00000048405|ENST00000265827|ZNF800	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.7777099609375	2	634.77873	1267.54291	0.47901	0.00030407	-2.644	-0.0016784	-2.165	-0.0013743	634.7769229054138	50.349	0.97601	50.394	49.77	50.746	0.044327					46	28	2	0	0	0	0.6493	1	3955	3955		38.754	5.9412	1	173620	+		4366	16365	2954	2957	4927	4927					-0.08016249103343398
DHLVRNLARL	10	Unmodified	_DHLVRNLARL_					0	0	0			REV__nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	REV__nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.2525939941406	3	402.907039	1205.69929	-0.1606	-6.4706E-05	0.50248	0.00020245	0.34188	0.00013775	402.9073258892494	22.166	0.4497	21.555	21.332	21.782	-0.6107					28	11	4	0	0	0	0.37624	1	856	856		11.097	0	1	113920	+		4367	18274	2955	2958	4928	4928					0.10466705648468633
DHNDGLGNAF	10	Unmodified	_DHNDGLGNAF_					0	0	0		ENSG00000271447|ENST00000605424|MMP28	ENSG00000271447|ENST00000605424|MMP28	ENSG00000271447|ENST00000605424|MMP28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.22802734375	2	530.228145	1058.44174	0.80248	0.0004255	-0.72495	-0.00038439	0.077532	4.1109E-05	530.2276638551339	29.573	1.0489	29.557	29.281	30.33	-0.015167					72	29	4	0	0	0	0.4892	2	1487	1487;1495		56.721	3.5405	1	294480			4368	8978	2956	2959	4929;4930	4929					-0.08514656015358923
DHPLSLTPRR	10	Unmodified	_DHPLSLTPRR_					0	0	0		ENST00000381222.8_2_X:2406450-2406666:-|nuORF	ENST00000381222.8_2_X:2406450-2406666:-|nuORF	ENST00000381222.8_2_X:2406450-2406666:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3330078125	2	596.333279	1190.652	-0.30561	-0.00018224	-0.32296	-0.00019259	-0.62857	-0.00037483	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.86763	1	9592	9592		26.693	1.1189	1	740920			4369	10948	2957	2960	4931	4931					0.0643042637743747
DHPRKLKTKA	10	Unmodified	_DHPRKLKTKA_					0	0	0		ENST00000342665.4_2_20:308281-308551:+|nuORF	ENST00000342665.4_2_20:308281-308551:+|nuORF	ENST00000342665.4_2_20:308281-308551:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.3587036132812	2	597.359296	1192.70404	-0.24184	-0.00014447	-1.7236	-0.0010296	-1.9655	-0.0011741	597.3578636523395	100.56	3.0718	100.56	99.06	102.13	0					172	73	4	0	0	0	0.8651	1	10181	10181		25.574	2.5316	1	2923800			4370	10265	2958	2961	4932	4932					0.11539589791209437
DHQGPEGSDLR	11	Unmodified	_DHQGPEGSDLR_					0	0	0		ENST00000565278.1_1_16:72762644-72762974:+|nuORF	ENST00000565278.1_1_16:72762644-72762974:+|nuORF	ENST00000565278.1_1_16:72762644-72762974:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.7760009765625	2	605.77599	1209.53743	1.1109	0.00067294	-3.029	-0.0018349	-1.9182	-0.001162	605.7737986436906	67.189	0.98923	67.574	67.235	68.225	0.38515					66	27	4	0	0	0	0.62614	1	7335	7335		41.427	6.2746	1	2138800			4371	13908	2959	2962	4933	4933					-0.05895927895130626
DHRFKRNT	8	Unmodified	_DHRFKRNT_					0	0	0			REV__ENSG00000174231|ENST00000304992|PRPF8	REV__ENSG00000174231|ENST00000304992|PRPF8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.292724609375	2	537.283589	1072.55262	-2.1818	-0.0011723	-0.46965	-0.00025233	-2.6515	-0.0014246	537.2831711701839	42.213	0.52541	42.911	42.731	43.257	0.69754					19	12	2	0	0	0	0.4196	1	3749	3749		12.207	0	1	478290	+		4372	21981	2960	2963	4934	4934					0.019250284833560727
DHRSDFLTGDM	11	Unmodified	_DHRSDFLTGDM_					0	0	0			REV__chr17:41819399-41820947|28|14.68|0.06|7.98|+|1|FKBP10,FKBP10|1	REV__chr17:41819399-41820947|28|14.68|0.06|7.98|+|1|FKBP10,FKBP10|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	647.2806396484375	2	647.280051	1292.54555	-1.0404	-0.00067345	1.3933	0.00090188	0.3529	0.00022843	647.2810878546856	58.803	1.0008	59.195	58.651	59.652	0.39209					69	23	4	0	0	0	0.65746	1	6174	6174		37.812	0.30334	1	2569500	+		4373	15653	2961	2964	4935	4935					-0.0890211697005725
DHSASFSNSSY	11	Unmodified	_DHSASFSNSSY_					0	0	0		ENSG00000133812|ENST00000256190|SBF2	ENSG00000133812|ENST00000256190|SBF2	ENSG00000133812|ENST00000256190|SBF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.2454223632812	2	601.241449	1200.46835	0.15963	9.5974E-05	-0.40878	-0.00024578	-0.24915	-0.0001498	601.240885345995	24.992	0.46951	24.951	24.72	25.19	-0.04117					20	10	3	0	0	0	0.62614	1	1007	1007		41.427	0	1	74268			4374	3895	2962	2965	4936	4936					-0.12387011914688628
DHSRALSTY	9	Unmodified	_DHSRALSTY_					0	0	0		nc|ENSG00000033800|O75925-3|PIAS1;ENST00000564009.1_1_15:68445936-68446074:+|nuORF	nc|ENSG00000033800|O75925-3|PIAS1	nc|ENSG00000033800|O75925-3|PIAS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.253173828125	2	525.254163	1048.49377	0.12758	6.7012E-05	-0.36247	-0.00019039	-0.23489	-0.00012338	525.2538167979219	20.496	0.47339	20.427	20.175	20.648	-0.069735					35	20	2	0	0	0	0.78058	1	532	532		30.504	0.18592	1	61036			4375	14743	2963	2966	4937	4937					-0.02853492601616381
DHSYVIAGY	9	Unmodified	_DHSYVIAGY_					0	0	0		nc|ENSG00000131148|O43402-2|EMC8;ENSG00000131148|ENST00000253457|EMC8	nc|ENSG00000131148|O43402-2|EMC8	nc|ENSG00000131148|O43402-2|EMC8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.2922973632812	2	512.740357	1023.46616	0.60726	0.00031137	-0.3543	-0.00018166	0.25296	0.0001297	512.7398610931114	53.874	0.50265	54.288	54.077	54.58	0.4139					20	11	2	0	0	0	0.20789	1	5471	5471		26.796	4.8362	1	289800			4376	3717	2964	2967	4938	4938					-0.04463395861864683
DHSYVPSRAEI	11	Unmodified	_DHSYVPSRAEI_					0	0	0		ENSG00000213213|ENST00000338005|CCDC183;ENST00000484858.1_1_9:139701238-139702139:+|nuORF;ENST00000481601.5_1_9:139700881-139702139:+|nuORF	ENSG00000213213|ENST00000338005|CCDC183	ENSG00000213213|ENST00000338005|CCDC183	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	637.3137817382812	2	637.312209	1272.60986	-0.22879	-0.00014581	3.8937	0.0024815	3.6649	0.0023357	637.3146066499098	64.321	1.8341	64.708	63.919	65.753	0.3868					73	43	3	0	0	0	0.61369	1	6942	6942		42.864	1.7842	1	464870			4377	8582	2965	2968	4939	4939					-0.015535938215407441
DHVKKEKREK	10	Unmodified	_DHVKKEKREK_					0	0	0		ENSG00000277149|ENST00000620995|TYW1B;ENSG00000198874|ENST00000359626|TYW1;nc|ENSG00000198874|Q9NV66-2|TYW1	ENSG00000277149|ENST00000620995|TYW1B	ENSG00000277149|ENST00000620995|TYW1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.8726196289062	2	648.872768	1295.73098	2.3415	0.0015193	-3.4932	-0.0022666	-1.1517	-0.0007473	648.8704740715605	99.639	2.1468	99.585	98.646	100.79	-0.053734					125	49	3	0	0	0	0.86763	1	10843	10843		26.693	1.5669	1	323740			4378	8354	2966	2969	4940	4940					0.09494653611727699
DHVPAQPGCGP	11	Unmodified	_DHVPAQPGCGP_					0	0	0		ENST00000488383.5_1_6:30614935-30617552:+|nuORF	ENST00000488383.5_1_6:30614935-30617552:+|nuORF	ENST00000488383.5_1_6:30614935-30617552:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.2427978515625	2	539.242741	1076.47093	0.82613	0.00044549	-1.6939	-0.00091341	-0.86774	-0.00046792	539.2416577167436	61.906	0.75049	61.873	61.511	62.261	-0.033169					56	28	3	0	0	0	0.63176	1	5852	5852		40.778	0.20554	1	574740			4379	12626	2967	2970	4941	4941					-0.0642483499075297
DHWPASYPEC	10	Unmodified	_DHWPASYPEC_					0	0	0		ENSG00000118298|ENST00000369111|CA14;chr1:150257328-150258080|34|10.38|0.03|8.39|+|ENST00000647854|CA14,CA14	ENSG00000118298|ENST00000369111|CA14	ENSG00000118298|ENST00000369111|CA14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	602.7417602539062	2	602.740031	1203.46551	-1.1695	-0.00070491	4.2121	0.0025388	3.0426	0.0018339	602.7423420873305	84.857	1.087	85.007	84.363	85.451	0.14952					55	24	3	0	0	0	0.74274	1	8239	8239		42.396	0.058059	1	343720			4380	21	2968	2971	4942	4942					-0.12808558573192386
DHYKINNCA	9	Unmodified	_DHYKINNCA_					0	0	0			REV__ENSG00000187699|ENST00000340623|C2orf88	REV__ENSG00000187699|ENST00000340623|C2orf88	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.24267578125	2	539.242741	1076.47093	0.48952	0.00026397	-1.2956	-0.00069867	-0.80613	-0.0004347	539.2418908615597	61.858	0.64476	61.978	61.607	62.252	0.11957					47	27	2	0	0	0	0.62081	1	5397	5397		45.952	0	1	434680	+		4381	22935	2969	2972	4943	4943					-0.0642483499075297
DIAALLIKYN	10	Unmodified	_DIAALLIKYN_					0	0	0		ENSG00000173273|ENST00000310430|TNKS	ENSG00000173273|ENST00000310430|TNKS	ENSG00000173273|ENST00000310430|TNKS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3290405273438	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.86348	1	9842	9842		31.53	5.4664	1	18558000			4382	6847	2970	2973	4944	4944					0.0881915819995811
DIAALLIKYN	10	Unmodified	_DIAALLIKYN_					0	0	0		ENSG00000173273|ENST00000310430|TNKS	ENSG00000173273|ENST00000310430|TNKS	ENSG00000173273|ENST00000310430|TNKS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3299560546875	2	567.331882	1132.64921	-1.3957	-0.00079181	-1.9666	-0.0011157	-3.3623	-0.0019075	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.77314	1	8903	8903		40.778	1.5253	1	5956400			4383	6847	2970	2973	4945	4945					0.0881915819995811
DIAHGKGKEL	10	Unmodified	_DIAHGKGKEL_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	534.2943115234375	2	534.29583	1066.57711	1.1668	0.00062344	-3.747	-0.002002	-2.5802	-0.0013786	534.293983772734	88.366	3.44	88.416	87.079	90.519	0.050415					160	80	3	0	0	0	0.78666	1	9099	9099		40.058	1.252	1	385550			4384	5146	2971	2974	4946	4946					0.04648243846236255
DIARHQAS	8	Unmodified	_DIARHQAS_					0	0	0		ENSG00000117724|ENST00000366955|CENPF	ENSG00000117724|ENST00000366955|CENPF	ENSG00000117724|ENST00000366955|CENPF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.2314147949219	2	449.230491	896.446428	0.9656	0.00043378	-0.74303	-0.00033379	0.22258	9.9988E-05	449.2301030462438	83.133	5.5992	83.192	80.121	85.72	0.059158					204	132	2	0	0	0	0.87922	1	8342	8342		31.955	1.4512	1	221730			4385	2999	2972	2975	4947	4947					-0.0059372708195724044
DIEILIQPE	9	Unmodified	_DIEILIQPE_					0	0	0		ENSG00000144357|ENST00000272793|UBR3;nc|ENSG00000144357|Q6ZT12-4|UBR3	ENSG00000144357|ENST00000272793|UBR3	ENSG00000144357|ENST00000272793|UBR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.292236328125	2	535.292422	1068.57029	-0.34034	-0.00018218	0.43641	0.00023361	0.096068	5.1425E-05	535.2925962525737	82.685	0.70068	83.116	82.754	83.454	0.43108					40	16	3	0	0	0	0.30689	1	9575	9575		64.207	14.766	1	636250			4386	4703	2973	2976	4948	4948					0.03874886175003667
DIELALPVL	9	Unmodified	_DIELALPVL_					0	0	0			REV__ENSG00000161850|ENST00000257974|KRT82	REV__ENSG00000161850|ENST00000257974|KRT82	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7960510253906	2	491.794601	981.574648	-0.41148	-0.00020237	2.6813	0.0013187	2.2699	0.0011163	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.77546	1	4469	4469		31.955	1.4512	1	887820	+	+	4387	16033	2974	2977	4949	4949					0.08312395388554705
DIETHKLY	8	Unmodified	_DIETHKLY_					0	0	0			REV__ENSG00000158186|ENST00000423968|MRAS	REV__ENSG00000158186|ENST00000423968|MRAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.7622985839844	2	509.763832	1017.51311	0.11756	5.9929E-05	-0.80509	-0.00041041	-0.68753	-0.00035048	509.76323659133084	49.029	0.79582	49.023	48.693	49.489	-0.0056419					37	17	3	0	0	0	0.91977	1	4066	4066		45.952	3.4775	1	403370	+		4388	20595	2975	2978	4950	4950					0.005054636892737108
DIEVRFYE	8	Unmodified	_DIEVRFYE_					0	0	0		ENST00000336486.5_1_10:104157832-104159780:+|nuORF;ENST00000467116.5_1_10:104155716-104158713:+|nuORF;nc|ENSG00000077150|Q00653-3|NFKB2;nc|ENSG00000077150|Q00653-4|NFKB2;ENSG00000077150|ENST00000661543|NFKB2	ENST00000336486.5_1_10:104157832-104159780:+|nuORF	ENST00000336486.5_1_10:104157832-104159780:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.822021484375	2	535.761289	1069.50803	0.028283	1.5153E-05	1.1971	0.00064138	1.2254	0.00065654	535.7615962554692	50.614	0.20632	50.612	50.479	50.685	-0.0020447					6	4	2	0	0	0	0.4196	1	4302	4302		26.693	2.1889	1	73309			4389	1373	2976	2979	4951	4951					-0.023948401733150604
DIGCGSTGAEH	11	Unmodified	_DIGCGSTGAEH_					0	0	0			REV__nc|ENSG00000143702|Q5SW79-2|CEP170	REV__nc|ENSG00000143702|Q5SW79-2|CEP170	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.7123413085938	2	523.714013	1045.41347	0.89468	0.00046855	-3.9933	-0.0020914	-3.0987	-0.0016228	523.7117291461819	23.83	0.65189	23.787	23.543	24.195	-0.043222					44	19	3	0	0	0	0.7342	1	812	812		25.574	1.0549	1	77684	+		4390	19834	2977	2980	4952	4952					-0.10741721986960329
DIGSESTEDQ	10	Unmodified	_DIGSESTEDQ_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.7196655273438	2	540.720015	1079.42548	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.409	1	33.408	32.908	33.908	-0.0016365								0	0	0	0.45132	1	1966	1966		41.427	2.1738	1			+	4391	581	2978	2981	4953	4953					-0.11105826762809556
DIHHKVLSL	9	Unmodified	_DIHHKVLSL_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2;chr4:75673298-75673364|52|10.21|0.42|4.59|-|ENST00000677201|G3BP2,G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3084716796875	2	531.308741	1060.60293	-0.3677	-0.00019536	0.13947	7.4101E-05	-0.22823	-0.00012126	531.3086656054257	37.269	0.66434	37.215	36.961	37.625	-0.053558					34	14	3	0	0	0	0.44421	1	2540	2540		54.776	8.8041	1	150080			4392	432	2979	2982	4954	4954					0.07505138088527019
DIHHKVLSL	9	Unmodified	_DIHHKVLSL_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2;chr4:75673298-75673364|52|10.21|0.42|4.59|-|ENST00000677201|G3BP2,G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.3079833984375	2	531.308741	1060.60293	-0.95465	-0.00050721	0.65914	0.00035021	-0.29551	-0.00015701	531.3089149242114	37.247	0.75082	37.258	36.973	37.724	0.011173					37	16	3	0	0	0	0.3164	1	2474	2474		63.534	24.281	1	208570			4393	432	2979	2982	4955	4955					0.07505138088527019
DIHVAGGAM	9	Unmodified	_DIHVAGGAM_					0	0	0			REV__nc|ENSG00000091140|P09622-2|DLD	REV__nc|ENSG00000091140|P09622-2|DLD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7104187011719	2	435.710545	869.406537	-1.1188	-0.00048749	1.2571	0.00054775	0.13831	6.0263E-05	435.7109701629178	30.887	0.88081	30.967	30.634	31.514	0.079834					32	19	2	0	0	0	0.3636	2	2051	2051;2063		60.294	8.9585	1	210470	+		4394	17009	2980	2983	4956;4957	4956					-0.033389900768725056
DIHVAGGAM	9	Unmodified	_DIHVAGGAM_					0	0	0			REV__nc|ENSG00000091140|P09622-2|DLD	REV__nc|ENSG00000091140|P09622-2|DLD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.7095031738281	2	435.710545	869.406537	0.47746	0.00020803	-0.29822	-0.00012994	0.17924	7.8098E-05	435.71025050255366	30.946	0.65066	30.949	30.623	31.274	0.0037212					22	14	2	0	0	0	0.49378	1	2086	2086		52.299	6.3472	1	252480	+		4395	17009	2980	2983	4958	4958					-0.033389900768725056
DIHVAGGAM	9	Unmodified	_DIHVAGGAM_					0	0	0			REV__nc|ENSG00000091140|P09622-2|DLD	REV__nc|ENSG00000091140|P09622-2|DLD	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	435.710545	869.406537	-1.1188	-0.00048749	1.2571	0.00054775	0.13831	6.0263E-05	435.7109701629178	30.887	0.88081	30.967	30.634	31.514	0.079834	0.0089927	0.00068842	NaN	60.294	32	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	210470	+		4396	17009	2980	2983							-0.033389900768725056
DIHVAGGAM	9	Unmodified	_DIHVAGGAM_					0	0	0			REV__nc|ENSG00000091140|P09622-2|DLD	REV__nc|ENSG00000091140|P09622-2|DLD	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	435.710545	869.406537	0.47746	0.00020803	-0.29822	-0.00012994	0.17924	7.8098E-05	435.71025050255366	30.946	0.65066	30.949	30.623	31.274	0.0037212	-0.0089927	-0.00066695	NaN	60.294	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252480	+		4397	17009	2980	2983							-0.033389900768725056
DIIKKTPAIPN	11	Unmodified	_DIIKKTPAIPN_					0	0	0			REV__ENST00000577978.1_1_17:61877821-61882415:+|nuORF	REV__ENST00000577978.1_1_17:61877821-61882415:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9115905761719	3	403.911568	1208.71287	-0.34293	-0.00013851	-3.0849	-0.001246	-3.4279	-0.0013846	403.9102188126006	68.233	2.7499	68.781	67.193	69.943	0.54819					138	70	3	0	0	0	0.74002	1	7393	7393		24.276	0.89802	1	253300	+		4398	23311	2981	2984	4959	4959					0.11686518637020527
DIKKLFLVSD	10	Unmodified	_DIKKLFLVSD_					0	0	0			REV__nc|ENSG00000158290|Q13620-3|CUL4B	REV__nc|ENSG00000158290|Q13620-3|CUL4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3433227539062	2	589.344989	1176.67542	-1.324	-0.0007803	-2.248	-0.0013248	-3.572	-0.0021051	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86763	1	9794	9794		26.693	0.62953	1	17904000	+		4399	20599	2982	2985	4960	4960					0.09415427371413898
DIKLQATVPRL	11	Unmodified	_DIKLQATVPRL_					0	0	0			REV__ENSG00000130158|ENST00000294618|DOCK6	REV__ENSG00000130158|ENST00000294618|DOCK6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3832397460938	2	627.382437	1252.75032	0.9271	0.00058164	-0.91787	-0.00057585	0.0092291	5.7902E-06	627.3816040296016	111.26	0.49553	111.33	110.97	111.47	0.069542					53	19	3	0	0	0	0.68532	1	11953	11953		33.922	1.1711	1	2019600	+		4400	18850	2983	2986	4961	4961					0.1340560990265658
DIKLTDEMV	9	Unmodified	_DIKLTDEMV_					0	0	0		ENSG00000241973|ENST00000255882|PI4KA;nc|ENSG00000183506|A4QPH2-4|PI4KAP2;nc|ENSG00000183506|A4QPH2|PI4KAP2;ENST00000360806.9_2_22:21827645-21842641:-|nuORF;nc|ENSG00000241973|P42356-2|PI4KA;ENST00000492581.5_1_22:21064985-21065135:-|nuORF	ENSG00000241973|ENST00000255882|PI4KA	ENSG00000241973|ENST00000255882|PI4KA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2957763671875	2	532.270632	1062.52671	0.18404	9.7959E-05	-3.1217	-0.0016616	-2.9376	-0.0015636	532.2685697780792	75.145	1.2046	75.54	75.158	76.363	0.39507					55	28	3	0	0	0	0.20789	1	8584	8584		51.335	33.97	1	248360			4401	8798	2984	2987	4962	4962					-0.002050465937827539
DIKLTQLAM	9	Unmodified	_DIKLTQLAM_					0	0	0		nc|ENSG00000174606|Q5VTE6-2|ANGEL2;ENSG00000174606|ENST00000366962|ANGEL2	nc|ENSG00000174606|Q5VTE6-2|ANGEL2	nc|ENSG00000174606|Q5VTE6-2|ANGEL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.79345703125	2	516.791535	1031.56852	-0.27075	-0.00013992	3.9455	0.002039	3.6748	0.0018991	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.69624	1	8714	8714		40.778	3.6191	1	817800			4402	6950	2985	2988	4963	4963					0.05399553885399655
DIKTITIKLQH	11	Unmodified	_DIKTITIKLQH_					0	0	0			REV__ENST00000325192.7_1_14:45369651-45369789:+|nuORF	REV__ENST00000325192.7_1_14:45369651-45369789:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677307128906	3	437.266122	1308.77654	-0.071192	-3.113E-05	4.1078	0.0017962	4.0366	0.0017651	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.77205	1	4539	4539		17.167	3.0807	1	3270700	+		4403	25057	2986	2989	4964	4964					0.13449879074119053
DILKLLLKQN	10	Unmodified	_DILKLLLKQN_					0	0	0		ENSG00000101752|ENST00000261537|MIB1;ENST00000577749.5_1_18:19378098-19392361:+|nuORF	ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3776245117188	2	599.381906	1196.74926	0.89992	0.0005394	-3.8863	-0.0023293	-2.9863	-0.00179	599.379410135585	103.38	3.1227	103.51	103.01	106.14	0.12621					246	78	5	0	0	0	0.85251	1	11066	11066		19.997	0.89325	1	20012000			4404	1959	2987	2990	4965	4965					0.15875395533748815
DILKPILRTLN	11	Unmodified	_DILKPILRTLN_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.59759521484375	3	432.606367	1294.79727	2.7172	0.0011755	3.8782	0.0016777	6.5954	0.0028532	432.6085783910663	106.81	0.39728	106.78	106.53	106.93	-0.034134					11	8	2	0	0	0	0.73277	1	11817	11817		25.892	8.4237	1	89984			4405	6039	2988	2991	4966	4966					0.1616646945381035
DILTILCLK	9	Unmodified	_DILTILCLK_					0	0	0		nc|ENSG00000164691|Q8N103-4|TAGAP;ENSG00000164691|ENST00000367066|TAGAP	nc|ENSG00000164691|Q8N103-4|TAGAP	nc|ENSG00000164691|Q8N103-4|TAGAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3119506835938	2	516.312103	1030.60965	0.96654	0.00049903	2.5474	0.0013153	3.514	0.0018143	516.3133887311924	32.644	2.0073	32.856	32.593	34.6	0.21168					79	47	2	0	0	0	0.71772	1	2368	2368		39.253	1.4413	1	535970			4406	5991	2989	2992	4967	4967					0.09557314924859384
DILTILCLK	9	Unmodified	_DILTILCLK_					0	0	0		nc|ENSG00000164691|Q8N103-4|TAGAP;ENSG00000164691|ENST00000367066|TAGAP	nc|ENSG00000164691|Q8N103-4|TAGAP	nc|ENSG00000164691|Q8N103-4|TAGAP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	516.312103	1030.60965	0.20337	0.000105	3.141	0.0016217	3.3444	0.0017267	516.3143145982659	32.513	0.235	32.624	32.535	32.77	0.11117	-0.11584	0.00059986	NaN	39.253	16	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77963			4407	5991	2989	2992							0.09557314924859384
DIMFVVDIVI	10	Unmodified	_DIMFVVDIVI_					0	0	0		nc|ENSG00000173826|Q9H252-3|KCNH6;nc|ENSG00000173826|Q9H252-2|KCNH6;ENSG00000173826|ENST00000314672|KCNH6;nc|ENSG00000173826|Q9H252-1|KCNH6	nc|ENSG00000173826|Q9H252-3|KCNH6	nc|ENSG00000173826|Q9H252-3|KCNH6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	581.3649291992188	2	582.322668	1162.63078	0.71901	0.00041869	-2.3864	-0.0013896	-1.6674	-0.00097095	582.3211291097697	102.05	0.71158	102.25	101.97	102.69	0.19483					30	17	2	0	0	0	0.37624	1	10696	10696		20.947	0	1	208600			4408	6889	2990	2993	4968	4968					0.055972802337237226
DIQEFLVKQ	9	Unmodified	_DIQEFLVKQ_					0	0	0			REV__ENSG00000215474|ENST00000425639|SKOR2	REV__ENSG00000215474|ENST00000425639|SKOR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.2803344726562	2	560.305864	1118.59717	1.0163	0.00056946	-0.91533	-0.00051286	0.10102	5.6599E-05	560.3051197965466	87.645	0.41982	88.091	87.89	88.31	0.44628					16	9	2	0	0	0	0.20789	1	10325	10325		60.972	13.315	1	141310	+		4409	23686	2991	2994	4969	4969					0.04261994786179457
DIRLPASA	8	Unmodified	_DIRLPASA_					0	0	0		ENSG00000115361|ENST00000233710|ACADL	ENSG00000115361|ENST00000233710|ACADL	ENSG00000115361|ENST00000233710|ACADL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7391662597656	2	421.74016	841.465767	-0.50848	-0.00021444	4.4027	0.0018568	3.8943	0.0016424	421.7421959827543	74.065	0.47587	74.022	73.808	74.284	-0.042984					32	18	2	0	0	0	0.91472	2	7257	7257;7264		53.351	7.3995	1	141780			4410	2836	2992	2995	4970;4971	4970					0.03869229208953584
DISKPRKTT	9	Unmodified	_DISKPRKTT_					0	0	0			REV__nc|ENSG00000008441|Q14938-6|NFIX	REV__nc|ENSG00000008441|Q14938-6|NFIX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3032836914062	2	523.303655	1044.59276	1.4247	0.00074556	-1.721	-0.00090062	-0.29632	-0.00015507	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.78124	1	8885	8885		30.318	2.2362	1	3882100	+		4411	16138	2993	2996	4972	4972					0.07224530363282611
DISMLKVLI	9	Unmodified	_DISMLKVLI_					0	0	0			REV__ENST00000237281.4_1_6:146127357-146127429:-|nuORF	REV__ENST00000237281.4_1_6:146127357-146127429:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3139038085938	2	516.312103	1030.60965	1.9037	0.0009829	1.7854	0.00092181	3.6891	0.0019047	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.78058	1	12205	12205		30.504	0	1	22616000	+		4412	24213	2994	2997	4973	4973					0.09557314924904858
DISPPRKKQAK	11	Unmodified	_DISPPRKKQAK_					0	0	0		ENSG00000137656|ENST00000260210|BUD13	ENSG00000137656|ENST00000260210|BUD13	ENSG00000137656|ENST00000260210|BUD13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3795776367188	2	634.377686	1266.74082	2.2046	0.0013986	-2.88	-0.001827	-0.67536	-0.00042843	634.3758788529967	118.51	0.88211	118.46	118	118.89	-0.051674					57	42	2	0	0	0	0.7342	1	14097	14097		25.574	2.9944	1	50079			4413	4221	2995	2998	4974	4974					0.11811841617145546
DITIDEPNA	9	Unmodified	_DITIDEPNA_					0	0	0		ENSG00000110076|ENST00000265459|NRXN2;nc|ENSG00000110076|Q9P2S2-2|NRXN2;nc|ENSG00000110076|P58401|NRXN2	ENSG00000110076|ENST00000265459|NRXN2	ENSG00000110076|ENST00000265459|NRXN2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.2447509765625	2	494.235104	986.455655	-1.1109	-0.00054907	1.4848	0.00073383	0.37384	0.00018477	494.2356414934842	28.653	0.44108	28.634	28.355	28.796	-0.019405					15	10	2	0	0	0	0.20789	1	1369	1369		35.618	0	1	13228			4414	2508	2996	2999	4975	4975					-0.03811423306956385
DITLPLNSD	9	Unmodified	_DITLPLNSD_					0	0	0		nc|ENSG00000130939|O95155-4|UBE4B;nc|ENSG00000130939|O95155-3|UBE4B;nc|ENSG00000130939|O95155-2|UBE4B;ENSG00000130939|ENST00000343090|UBE4B	nc|ENSG00000130939|O95155-4|UBE4B	nc|ENSG00000130939|O95155-4|UBE4B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.30072021484375	2	494.253297	986.492041	0.76221	0.00037673	4.2557	0.0021034	5.0179	0.0024801	494.2553335295798	96.965	0.34394	97.128	96.835	97.179	0.16316					10	7	2	0	0	0	0.20789	1	9997	9997		42.396	7.1954	1	35666			4415	14910	2997	3000	4976	4976					-0.001745464102441474
DIVGKRCY	8	Unmodified	_DIVGKRCY_					0	0	0		nc|ENSG00000151322|Q8IXF0-4|NPAS3;nc|ENSG00000151322|Q8IXF0-2|NPAS3;nc|ENSG00000151322|Q8IXF0-3|NPAS3;ENSG00000151322|ENST00000356141|NPAS3;chr14:32935003-33215182|13|21.85|0.31|6.14|+|ENST00000551634|NPAS3,NPAS3;chr14:33215426-33367192|18|10.78|0.44|4.62|+|ENST00000551492|NPAS3,NPAS3;chr14:32935003-33055905|21|18.76|0.18|6.7|+|ENST00000551492|NPAS3,NPAS3	nc|ENSG00000151322|Q8IXF0-4|NPAS3	nc|ENSG00000151322|Q8IXF0-4|NPAS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.24639892578125	2	477.247295	952.480036	-0.8935	-0.00042642	-0.51654	-0.00024652	-1.41	-0.00067294	477.2468568382562	68.342	1.3917	68.478	67.814	69.206	0.13522					122	54	3	0	0	0	0.89962	1	6091	6091		38.806	3.6054	1	604720			4416	167	2998	3001	4977	4977					0.0018955836558234296
DIVGKRCY	8	Unmodified	_DIVGKRCY_					0	0	0		nc|ENSG00000151322|Q8IXF0-4|NPAS3;nc|ENSG00000151322|Q8IXF0-2|NPAS3;nc|ENSG00000151322|Q8IXF0-3|NPAS3;ENSG00000151322|ENST00000356141|NPAS3;chr14:32935003-33215182|13|21.85|0.31|6.14|+|ENST00000551634|NPAS3,NPAS3;chr14:33215426-33367192|18|10.78|0.44|4.62|+|ENST00000551492|NPAS3,NPAS3;chr14:32935003-33055905|21|18.76|0.18|6.7|+|ENST00000551492|NPAS3,NPAS3	nc|ENSG00000151322|Q8IXF0-4|NPAS3	nc|ENSG00000151322|Q8IXF0-4|NPAS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2459411621094	2	477.247295	952.480036	-0.88369	-0.00042174	-0.86186	-0.00041132	-1.7455	-0.00083306	477.24693641483543	64.828	2.6891	65.382	64.729	67.418	0.55386					152	75	5	0	0	0	0.93786	1	6977	6977		53.351	5.4358	1	2295100			4417	167	2998	3001	4978	4978					0.0018955836558234296
DIVLILTSA	9	Unmodified	_DIVLILTSA_					0	0	0		ENSG00000214978|ENST00000399363|GSG1L2	ENSG00000214978|ENST00000399363|GSG1L2	ENSG00000214978|ENST00000399363|GSG1L2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.78875732421875	2	472.786776	943.558998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.07	1	118.05	117.55	118.55	-0.024208								0	0	0	0.34348	1	13075	13075		16.473	1.809	1				4418	8643	2999	3002	4979	4979					0.08496108871509023
DIVLYTPEGL	10	Unmodified	_DIVLYTPEGL_					0	0	0			REV__ENST00000557056.5_1_14:24792528-24800258:-|nuORF	REV__ENST00000557056.5_1_14:24792528-24800258:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.340087890625	2	560.300247	1118.58594	3.1403	0.0017595	-0.53571	-0.00030016	2.6046	0.0014594	560.3019619449146	102.37	0.65688	102.32	101.88	102.54	-0.047005					30	15	3	0	0	0	0.37624	1	11127	11127		32.812	9.7699	1	661980	+		4419	28712	3000	3003	4980	4980					0.031391726920674046
DIWDSPEGSD	10	Unmodified	_DIWDSPEGSD_					0	0	0		nc|ENSG00000148362|Q9BUH6-2|PAXX	nc|ENSG00000148362|Q9BUH6-2|PAXX	nc|ENSG00000148362|Q9BUH6-2|PAXX	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3401489257812	2	560.725101	1119.43565	0.8619	0.00048329	-3.2267	-0.0018093	-2.3648	-0.001326	560.722652947946	102.43	0.11977	102.57	102.49	102.61	0.13523					4	2	2	0	0	0	0.37624	1	10786	10786		27.882	0	1	27754			4420	14983	3001	3004	4981	4981					-0.11929219037551775
DIYKFQRKFLK	11	Unmodified	_DIYKFQRKFLK_					0	0	0		nc|ENSG00000228741|Q96N96-5|SPATA13;nc|ENSG00000228741|Q96N96-2|SPATA13;nc|ENSG00000228741|Q96N96-3|SPATA13;nc|ENSG00000228741|Q96N96-4|SPATA13;nc|ENSG00000228741|Q96N96|SPATA13;ENSG00000182957|ENST00000382108|SPATA13	nc|ENSG00000228741|Q96N96-5|SPATA13	nc|ENSG00000228741|Q96N96-5|SPATA13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.9611511230469	3	495.9574	1484.85037	2.5901	0.0012846	-0.088898	-4.4089E-05	2.5012	0.0012405	495.9572429901521	102.14	1.1863	102.44	101.79	102.98	0.29864					72	27	3	0	0	0	0.77205	1	12507	12507		17.167	3.0807	1	327260			4421	7487	3002	3005	4982	4982					0.12733847236449947
DIYLHRHEKP	10	Unmodified	_DIYLHRHEKP_					0	0	0			REV__ENSG00000169933|ENST00000675598|FRMPD4	REV__ENSG00000169933|ENST00000675598|FRMPD4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2659912109375	3	436.566683	1306.67822	0.046574	2.0333E-05	1.9299	0.00084255	1.9765	0.00086288	436.9009737195091	24.17	0.10231	24.264	24.192	24.294	0.094501					5	4	2	0	0	0	0.37624	1	815	815		11.097	0	1	30496	+		4422	21618	3003	3006	4983	4983					0.03714695548933378
DKAAKNALI	9	Unmodified	_DKAAKNALI_					0	0	0			REV__ENSG00000214814|ENST00000522917|FER1L6	REV__ENSG00000214814|ENST00000522917|FER1L6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7547912597656	2	472.282192	942.549831	-1.717	-0.0008109	1.394	0.00065836	-0.32297	-0.00015254	472.28270893921444	47.334	0.46603	48.257	47.999	48.466	0.92315					21	11	2	0	0	0	0.20789	1	4540	4540		39.253	7.298	1	571060	+		4423	23665	3004	3007	4984	4984					0.07625760305836593
DKAEVYKTQVV	11	Unmodified	_DKAEVYKTQVV_					0	0	0			REV__ENST00000550069.1_1_12:53689351-53689733:+|nuORF	REV__ENST00000550069.1_1_12:53689351-53689733:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3450317382812	2	640.34826	1278.68197	0.023456	1.502E-05	-2.2118	-0.0014164	-2.1884	-0.0014013	640.3467925312829	103.68	0.57704	103.68	103.38	103.96	0					38	13	4	0	0	0	0.50531	1	10667	10667		51.528	15.081	1	848260	+		4424	18537	3005	3008	4985	4985					0.05377320532124941
DKAKAEALL	9	Unmodified	_DKAKAEALL_					0	0	0			REV__nc|ENSG00000128487|Q5M775-5|SPECC1	REV__nc|ENSG00000128487|Q5M775-5|SPECC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3075256347656	2	479.782025	957.549496	-2.1758	-0.0010439	0.19996	9.5937E-05	-1.9758	-0.00094796	479.78192902932966	43.887	0.45177	44.66	44.463	44.915	0.7738					18	10	3	0	0	0	0.20789	1	4025	4025		25.574	0	1	310300	+		4425	18772	3006	3009	4986	4986					0.06902340585986622
DKARPPFA	8	Unmodified	_DKARPPFA_					0	0	0			REV__ENSG00000136193|ENST00000242059|SCRN1	REV__ENSG00000136193|ENST00000242059|SCRN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2480773925781	2	451.248152	900.481751	-0.60944	-0.00027501	2.0486	0.00092444	1.4392	0.00064943	451.24890898084885	67.67	1.2739	67.634	67.25	68.524	-0.035698					111	49	3	0	0	0	0.884	1	6552	6552		33.516	8.0654	1	185140	+		4426	19293	3007	3010	4987	4987					0.027529354458465605
DKASVHVI	8	Unmodified	_DKASVHVI_					0	0	0			REV__ENSG00000113013|ENST00000297185|HSPA9	REV__ENSG00000113013|ENST00000297185|HSPA9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7802734375	2	434.747985	867.481417	0.37303	0.00016217	-3.5665	-0.0015505	-3.1934	-0.0013883	434.74538582257026	36.212	0.20488	36.493	36.348	36.553	0.28173					6	4	2	0	0	0	0.4196	1	2815	2815		11.511	4.3177	1	59269	+		4427	17975	3008	3011	4988	4988					0.0423751572599258
DKATCVEKI	9	Unmodified	_DKATCVEKI_					0	0	0		CON__Q29443;CON__Q0IIK2	CON__Q29443	CON__Q29443	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.457275390625	2	503.765517	1005.51648	-0.87898	-0.0004428	-3.3818	-0.0017036	-4.2608	-0.0021464	503.76367380545236	44.397	0.72752	44.848	44.523	45.251	0.45025					29	17	2	0	0	0	0.20789	1	4083	4083		51.193	3.2771	1	307900		+	4428	603	3009	3012	4989	4989					0.013943904716484212
DKAWLKSKDVK	11	Unmodified	_DKAWLKSKDVK_					0	0	0		ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENST00000523019.1_1_8:30778611-30778848:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.9455871582031	3	439.922355	1316.74524	0.042945	1.8893E-05	1.0645	0.00046829	1.1074	0.00048718	439.9234476390588	23.389	0.14163	23.483	23.436	23.578	0.094501					6	5	2	0	0	0	0.17925	1	752	752		4.4131	0	1	26009			4429	13197	3010	3013	4990	4990					0.09953306040006282
DKCEYGAPCGQ	11	2 Carbamidomethyl (C)	_DKC(Carbamidomethyl (C))EYGAPC(Carbamidomethyl (C))GQ_	DKC(1)EYGAPC(1)GQ		DKC(80)EYGAPC(80)GQ		0	2	0			REV__nc|ENSG00000198216|Q15878-2|CACNA1E	REV__nc|ENSG00000198216|Q15878-2|CACNA1E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.7530517578125	2	642.752812	1283.49107	-0.76535	-0.00049193	1.0854	0.00069767	0.32009	0.00020574	642.7533636052166	52.144	0.88099	52.12	51.821	52.702	-0.023853					49	20	3	0	0	0	0.1837	1	4583	4583		80.455	7.5754	1	1141900	+		4430	23309	3011	3014	4991	4991	281;282				-0.13933452113110434
DKCYTVATQ	9	Unmodified	_DKCYTVATQ_					0	0	0			REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3095703125	2	514.739499	1027.46445	-0.65598	-0.00033766	-1.1358	-0.00058462	-1.7917	-0.00092228	514.7383991909519	58.778	0.4182	59.17	58.983	59.401	0.39209					13	9	2	0	0	0	0.20789	1	6156	6156		19.104	6.1443	1	127960	+		4431	20162	3012	3015	4992	4992					-0.04818772942144278
DKDEAAAL	8	Unmodified	_DKDEAAAL_					0	0	0			REV__nc|ENSG00000095383|Q9BYX2-4|TBC1D2	REV__nc|ENSG00000095383|Q9BYX2-4|TBC1D2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7368469238281	2	416.705983	831.397412	-0.036481	-1.5202E-05	1.0117	0.00042158	0.97523	0.00040638	416.70634835621615	38.645	0.88034	38.987	38.737	39.617	0.34187					28	20	2	0	0	0	0.4196	1	3181	3181		53.351	14.545	1	97472	+		4432	17058	3013	3016	4993	4993					-0.025030601615753767
DKDKLINA	8	Unmodified	_DKDKLINA_					0	0	0			REV__ENSG00000155660|ENST00000652332|PDIA4	REV__ENSG00000155660|ENST00000652332|PDIA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7582092285156	2	458.758549	915.502546	-1.3238	-0.00060732	1.9426	0.00089121	0.61882	0.00028389	458.7591125380311	28.706	1.1347	28.677	28.251	29.386	-0.029207					48	26	4	0	0	0	0.92457	1	1750	1750		47.916	1.9636	1	426660	+		4433	20439	3014	3017	4994	4994					0.04141481034844219
DKDPLLRRID	10	Unmodified	_DKDPLLRRID_					0	0	0			REV__nc|ENSG00000167210|Q8IVV2|LOXHD1	REV__nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.26617431640625	3	414.238455	1239.69353	-0.40522	-0.00016786	-1.3537	-0.00056076	-1.7589	-0.00072862	414.2378196074977	16.46	0.13523	16.38	16.299	16.434	-0.080017					7	4	2	0	0	0	0.37624	1	112	112		17.167	4.7339	1	20717	+		4434	21369	3015	3018	4995	4995					0.08327562346153172
DKEKRVPF	8	Unmodified	_DKEKRVPF_					0	0	0		nc|ENSG00000197057|Q6ZMT9-2|DTHD1;nc|ENSG00000197057|Q6ZMT9|DTHD1;ENSG00000197057|ENST00000639862|DTHD1	nc|ENSG00000197057|Q6ZMT9-2|DTHD1	nc|ENSG00000197057|Q6ZMT9-2|DTHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.2889404296875	2	509.787641	1017.56073	-0.49411	-0.00025189	3.7326	0.0019028	3.2385	0.0016509	510.2907867562299	23.644	1.341	23.696	23.031	24.372	0.05291					78	64	2	0	0	0	0.86791	1	786	786		28.254	2.8041	1	116410			4435	8128	3016	3019	4996	4996					0.05265162680143476
DKEPAIAY	8	Unmodified	_DKEPAIAY_					0	0	0			REV__ENSG00000142319|ENST00000270349|SLC6A3	REV__ENSG00000142319|ENST00000270349|SLC6A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7323913574219	2	453.732	905.449448	-0.25805	-0.00011709	0.71198	0.00032305	0.45393	0.00020596	453.73217599550503	54.692	1.132	55.261	54.651	55.783	0.56836					63	26	3	0	0	0	0.93293	1	5587	5587		51.335	1.3109	1	1968900	+		4436	19736	3017	3020	4997	4997					-0.007058967478201339
DKEPARFFE	9	Unmodified	_DKEPARFFE_					0	0	0			REV__nc|ENSG00000169994|Q6PIF6-2|MYO7B	REV__nc|ENSG00000169994|Q6PIF6-2|MYO7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.7777709960938	2	569.780013	1137.54547	-0.34656	-0.00019746	-3.0575	-0.0017421	-3.404	-0.0019396	569.7780779655194	23.853	0.60036	23.908	23.63	24.23	0.055487					40	15	3	0	0	0	0.44421	1	814	814		54.776	7.119	1	132980	+		4437	21624	3018	3021	4998	4998					-0.017797489077111095
DKFFPSPT	8	Unmodified	_DKFFPSPT_					0	0	0			REV__ENST00000406961.5_1_2:24991652-24991949:+|nuORF	REV__ENST00000406961.5_1_2:24991652-24991949:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	469.27880859375	2	469.734543	937.454533	-1.2137	-0.00057011	1.4429	0.00067776	0.22918	0.00010765	469.7349749719843	72.499	0.66553	72.885	72.541	73.207	0.38582					18	15	2	0	0	0	0.4196	1	8101	8101		18.324	0.95945	1	185000	+		4438	26312	3019	3022	4999	4999					-0.016695928851959252
DKFGRRSSY	9	Unmodified	_DKFGRRSSY_					0	0	0		ENST00000560357.5_1_8:28821384-28828064:+|nuORF;nc|ENSG00000147421|Q6NT76-4|HMBOX1;nc|ENSG00000147421|Q6NT76-2|HMBOX1;nc|ENSG00000147421|Q6NT76-3|HMBOX1;ENSG00000147421|ENST00000287701|HMBOX1;nc|ENSG00000147421|Q6NT76-5|HMBOX1	ENST00000560357.5_1_8:28821384-28828064:+|nuORF	ENST00000560357.5_1_8:28821384-28828064:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.2838745117188	2	558.283254	1114.55196	0.6293	0.00035133	2.1531	0.0012021	2.7824	0.0015534	558.2840698392147	75.208	0.67989	75.34	75.039	75.719	0.13208					41	18	3	0	0	0	0.64555	1	6980	6980		44.377	3.599	1	144330			4439	4902	3020	3023	5000	5000					-0.000738109563371836
DKFLADDI	8	Unmodified	_DKFLADDI_					0	0	0			REV__ENSG00000144452|ENST00000272895|ABCA12	REV__ENSG00000144452|ENST00000272895|ABCA12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	469.2390441894531	2	468.737283	935.460012	-0.11485	-5.3835E-05	0.73154	0.0003429	0.61669	0.00028906	468.73712660648437	74.635	0.65882	74.678	74.408	75.067	0.042908					32	22	2	0	0	0	0.89494	1	7143	7143		37.159	2.9866	1	47953	+		4440	19890	3021	3024	5001	5001					-0.010299140933966555
DKFLASVSTVL	11	Unmodified	_DKFLASVSTVL_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.334228515625	2	590.334621	1178.65469	-0.39493	-0.00023314	0.58469	0.00034516	0.18976	0.00011202	590.3348083495117	78.54	0.67831	78.95	78.675	79.354	0.4106					35	15	3	0	0	0	0.1264	2	8974	8963;8974		86.882	26.397	1	733200			4441	7934	3022	3025	5002;5003	5003					0.07250836991738652
DKFLASVSTVL	11	Unmodified	_DKFLASVSTVL_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.3341064453125	2	590.334621	1178.65469	-0.055016	-3.2478E-05	0.21135	0.00012476	0.15633	9.2287E-05	590.334545628042	78.466	0.80212	79.03	78.742	79.544	0.56332					38	18	3	0	0	0	0.00060184	1	8983	8983		128.6	59.756	1	645810			4442	7934	3022	3025	5004	5004					0.07250836991738652
DKFLASVSTVL	11	Unmodified	_DKFLASVSTVL_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	590.334621	1178.65469	-0.65423	-0.00038621	0.68659	0.00040532	0.032357	1.9102E-05	590.3347220071597	79.149	0.44881	79.208	78.962	79.411	0.059349	0.14953	0.00065535	NaN	128.6	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64038			4443	7934	3022	3025							0.07250836991738652
DKFLASVSTVL	11	Unmodified	_DKFLASVSTVL_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	590.334621	1178.65469	0.72025	0.00042519	-0.73848	-0.00043595	-0.01822	-1.0756E-05	590.3340429445042	79.118	0.42796	79.065	78.838	79.266	-0.053558	0.0062027	-0.0010272	NaN	128.6	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58418			4444	7934	3022	3025							0.07250836991738652
DKFLASVSTVL	11	Unmodified	_DKFLASVSTVL_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	590.334621	1178.65469	-1.4313	-0.00084497	1.6867	0.00099572	0.25536	0.00015075	590.3354380196809	78.989	0.6741	79.041	78.659	79.333	0.051674	-0.01776	0.0018362	NaN	128.6	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76674			4445	7934	3022	3025							0.07250836991738652
DKFLASVSTVL	11	Unmodified	_DKFLASVSTVL_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	590.334621	1178.65469	0.79941	0.00047192	-1.2526	-0.00073946	-0.4532	-0.00026754	590.3338703566526	78.944	0.52554	79.075	78.82	79.345	0.13085	0.01619	-0.0016342	NaN	128.6	36	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	152900			4446	7934	3022	3025							0.07250836991738652
DKFLASVSTVL	11	Unmodified	_DKFLASVSTVL_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	590.334621	1178.65469	0.69388	0.00040962	-0.84433	-0.00049844	-0.15045	-8.8815E-05	590.3342326071833	78.897	0.66958	79.036	78.672	79.341	0.13883	-0.02285	-0.0011522	NaN	128.6	38	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142060			4447	7934	3022	3025							0.07250836991738652
DKFLASVSTVL	11	Unmodified	_DKFLASVSTVL_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	590.334621	1178.65469	-1.0023	-0.00059168	0.56669	0.00033454	-0.43559	-0.00025715	590.334928735514	78.97	0.60733	79.064	78.742	79.35	0.094208	0.0053647	0.0005138	NaN	128.6	39	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	148220			4448	7934	3022	3025							0.07250836991738652
DKFLSVFYTV	10	Unmodified	_DKFLSVFYTV_					0	0	0		ENSG00000155249|ENST00000641172|OR4K1	ENSG00000155249|ENST00000641172|OR4K1	ENSG00000155249|ENST00000641172|OR4K1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2485046386719	3	406.885018	1217.63323	-0.18703	-7.61E-05	0.61432	0.00024996	0.42729	0.00017386	407.21872458643963	88.726	0.24133	88.795	88.673	88.914	0.068161					7	5	2	0	0	0	0.37624	1	9033	9033		6.001	0.30226	1	53803			4449	5315	3023	3026	5005	5005					0.03311451963031686
DKFVYTDMSY	10	Unmodified	_DKFVYTDMSY_					0	0	0			REV__ENST00000535340.5_1_11:18591643-18610207:-|nuORF	REV__ENST00000535340.5_1_11:18591643-18610207:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.7766723632812	2	634.778822	1267.54309	-0.70053	-0.00044468	-1.3148	-0.00083463	-2.0154	-0.0012793	634.7779069574395	50.185	1.0969	50.162	49.456	50.553	-0.02343					52	24	3	0	0	0	0.86698	1	4333	4333		28.081	1.0342	1	158060	+		4450	28385	3024	3027	5006	5006					-0.07997965427693998
DKGAIKFVLS	10	Unmodified	_DKGAIKFVLS_					0	0	0		ENST00000487133.1_1_X:119739298-119742228:+|nuORF;nc|ENSG00000232119|Q9ULC4-2|MCTS1;ENSG00000232119|ENST00000371317|MCTS1;ENSG00000101898|ENST00000394552|MCTS2;nc|ENSG00000232119|Q9ULC4-3|MCTS1	ENST00000487133.1_1_X:119739298-119742228:+|nuORF	ENST00000487133.1_1_X:119739298-119742228:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.3171997070312	2	539.318774	1076.623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.913	1	80.044	79.544	80.544	0.13086								0	0	0	0.45132	1	7594	7594		35.152	0.97948	1				4451	1969	3025	3028	5007	5007					0.08774889028472899
DKGGIILGASF	11	Unmodified	_DKGGIILGASF_					0	0	0			REV__ENSG00000178105|ENST00000322536|DDX10	REV__ENSG00000178105|ENST00000322536|DDX10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.3006591796875	2	539.300581	1076.58661	-1.2259	-0.00066112	0.43156	0.00023274	-0.79432	-0.00042838	539.30071096102	60.728	0.53766	61.117	60.784	61.322	0.38945					33	14	3	0	0	0	0.37012	2	6459	6459;6472		61.691	3.4614	1	718290	+		4452	22255	3026	3029	5008;5009	5008					0.05138012131760661
DKGGRRLRLRP	11	Unmodified	_DKGGRRLRLRP_					0	0	0			REV__ENST00000466082.1_3_9:34660594-34661492:+|nuORF	REV__ENST00000466082.1_3_9:34660594-34661492:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.9397277832031	3	441.940855	1322.80073	0.44003	0.00019447	-2.9046	-0.0012837	-2.4646	-0.0010892	441.9393914889037	56.404	2.26	56.437	55.731	57.991	0.033184					145	81	3	0	0	0	0.77205	1	5175	5175		17.167	0.63689	1	750870	+		4453	27119	3027	3030	5010	5010					0.1522457707101239
DKGHLRGG	8	Unmodified	_DKGHLRGG_					0	0	0		ENST00000495220.5_1_9:140500199-140508117:+|nuORF	ENST00000495220.5_1_9:140500199-140508117:+|nuORF	ENST00000495220.5_1_9:140500199-140508117:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2278137207031	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.87479	1	7942	7942		30.504	1.3541	1	888480			4454	12764	3028	3031	5011	5011					0.015265941262327942
DKGHLRGG	8	Unmodified	_DKGHLRGG_					0	0	0		ENST00000495220.5_1_9:140500199-140508117:+|nuORF	ENST00000495220.5_1_9:140500199-140508117:+|nuORF	ENST00000495220.5_1_9:140500199-140508117:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2276306152344	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.89962	1	7710	7710		38.806	1.647	1	961790			4455	12764	3028	3031	5012	5012					0.015265941262327942
DKGLVVAQM	9	Unmodified	_DKGLVVAQM_					0	0	0		ENSG00000123684|ENST00000366997|LPGAT1	ENSG00000123684|ENST00000366997|LPGAT1	ENSG00000123684|ENST00000366997|LPGAT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.9552307128906	2	480.762778	959.511002	1.1107	0.00053399	3.1166	0.0014984	4.2273	0.0020323	480.7641483656359	18.811	0.29906	18.334	18.218	18.517	-0.47694					11	6	2	0	0	0	0.20789	1	445	445		40.778	0	1	60376			4456	3288	3029	3032	5013	5013					0.02962711679822405
DKGNELRAL	9	Unmodified	_DKGNELRAL_					0	0	0			REV__ENST00000520160.1_1_8:98900282-98900426:+|nuORF	REV__ENST00000520160.1_1_8:98900282-98900426:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.27978515625	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.77244	1	8913	8913		32.812	1.2826	1	1954800	+		4457	28096	3030	3033	5014	5014					0.03911670812135526
DKGNGKKH	8	Unmodified	_DKGNGKKH_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2405700683594	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.90465	1	7960	7960		40.573	6.4001	1	1094000			4458	3009	3031	3034	5015	5015					0.021228632976999506
DKGPILLL	8	Unmodified	_DKGPILLL_					0	0	0			REV__ENST00000275072.4_1_6:89862778-89862823:+|nuORF	REV__ENST00000275072.4_1_6:89862778-89862823:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.76007080078125	2	434.778754	867.542954	-0.16638	-7.2338E-05	-2.8861	-0.0012548	-3.0524	-0.0013271	434.78011077548354	89.032	2.7536	89.1	88.05	90.803	0.068161					82	64	2	0	0	0	0.4196	1	8923	8923		26.796	0	1	83128	+		4459	24570	3032	3035	5016	5016					0.10388447425293634
DKGPILLL	8	Unmodified	_DKGPILLL_					0	0	0			REV__ENST00000275072.4_1_6:89862778-89862823:+|nuORF	REV__ENST00000275072.4_1_6:89862778-89862823:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7606201171875	2	434.778754	867.542954	0.33448	0.00014542	-4.2792	-0.0018605	-3.9448	-0.0017151	434.77969012102756	87.73	0.90013	88.178	87.891	88.791	0.4472					28	21	2	0	0	0	0.4196	1	10282	10282		12.959	0	1	55400	+		4460	24570	3032	3035	5017	5017					0.10388447425293634
DKGPRAKT	8	Unmodified	_DKGPRAKT_					0	0	0			REV__chr13:31786454-31789122|15|18.4|0.03|9.2|+|0|RXFP2,RXFP2|2	REV__chr13:31786454-31789122|15|18.4|0.03|9.2|+|0|RXFP2,RXFP2|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.9335632324219	2	436.751059	871.487565	0.25878	0.00011302	4.3237	0.0018884	4.5824	0.0020014	436.7527834408516	21.183	0.37957	20.555	20.296	20.676	-0.62835					19	10	2	0	0	0	0.4196	1	750	750		9.1829	6.4645	1	39489	+		4461	15565	3033	3036	5018	5018					0.046680339575118523
DKGQRPWGLW	10	Unmodified	_DKGQRPWGLW_					0	0	0			REV__ENST00000610122.1_1_7:5467202-5467424:-|nuORF	REV__ENST00000610122.1_1_7:5467202-5467424:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.5608215332031	3	414.884123	1241.63054	0.20652	8.5684E-05	2.0384	0.0008457	2.2449	0.00093139	414.88457596096214	30.234	0.56906	30.144	29.917	30.486	-0.089546					26	12	3	0	0	0	0.37624	1	2021	2021		21.686	0	1	161670	+		4462	29425	3034	3037	5019	5019					0.01939041348759929
DKGRINKGT	9	Unmodified	_DKGRINKGT_					0	0	0			REV__ENST00000547108.5_1_12:39726520-39726704:-|nuORF	REV__ENST00000547108.5_1_12:39726520-39726704:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.78021240234375	2	494.780348	987.546142	-0.98597	-0.00048784	1.2423	0.00061469	0.25638	0.00012685	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.78912	1	8188	8188		28.081	0.19925	1	385180	+		4463	28545	3035	3038	5020	5020					0.051870905319901794
DKGRLIRAP	9	Unmodified	_DKGRLIRAP_					0	0	0			REV__nc|ENSG00000172752|A8TX70-2|COL6A5	REV__nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3172607421875	2	513.314358	1024.61416	0.39078	0.00020059	4.0535	0.0020807	4.4443	0.0022813	513.3164630994114	53.539	1.8096	53.62	52.959	54.769	0.081528					78	48	3	0	0	0	0.76255	1	4349	4349		35.618	8.9254	1	262680	+		4464	21854	3036	3039	5021	5021					0.10283960182641749
DKGWTGLGLI	10	Unmodified	_DKGWTGLGLI_					0	0	0			REV__ENST00000587411.5_1_19:5925055-5932565:-|nuORF	REV__ENST00000587411.5_1_19:5925055-5932565:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2932739257812	2	530.295299	1058.57605	-0.066725	-3.5384E-05	-3.5889	-0.0019032	-3.6556	-0.0019386	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.86225	1	9175	9175		32.751	2.909	1	2084800	+		4465	29128	3037	3040	5022	5022					0.049100294773325004
DKHAKVVDLVK	11	Unmodified	_DKHAKVVDLVK_					0	0	0			REV__nc|ENSG00000099954|Q9BXF3-2|CECR2	REV__nc|ENSG00000099954|Q9BXF3-2|CECR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.922119140625	3	417.918834	1250.73467	4.0685	0.0017003	4.0974	0.0017124	8.1659	0.0034127	417.9204504044182	105.51	2.6111	105.69	104.89	107.5	0.18647					199	86	4	0	0	0	0.74763	2	12874	12874;12897		25.068	4.2306	1	601650	+		4466	29736	3038	3041	5023;5024	5023					0.1193332338559685
DKHHLADL	8	Unmodified	_DKHHLADL_					0	0	0		nc|ENSG00000166532|Q9ULI2-2|RIMKLB;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;ENSG00000166532|ENST00000535829|RIMKLB	nc|ENSG00000166532|Q9ULI2-2|RIMKLB	nc|ENSG00000166532|Q9ULI2-2|RIMKLB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.7821044921875	2	474.748516	947.482479	0.37587	0.00017844	-0.071097	-3.3753E-05	0.30477	0.00014469	474.74831025108665	34.945	0.4603	35.327	35.136	35.597	0.3812					21	11	3	0	0	0	0.4196	1	2691	2691		6.7355	0	1	298520			4467	6205	3039	3042	5025	5025					0.006637300948909797
DKHLVKQVI	9	Unmodified	_DKHLVKQVI_					0	0	0			REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.2579956054688	2	540.332216	1078.64988	-0.34296	-0.00018532	-3.8786	-0.0020958	-4.2216	-0.0022811	540.3304458273881	86.243	1.8062	86.687	85.663	87.469	0.44331					61	43	3	0	0	0	0.20789	1	10157	10157		14.137	0	1	168950	+		4468	18631	3040	3043	5026	5026					0.11369997639667417
DKHWTIDPPP	10	Unmodified	_DKHWTIDPPP_					0	0	0			REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	603.3178100585938	2	603.301113	1204.58767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.22	1	114.22	113.72	114.72	0								0	0	0	0.45132	1	11783	11783		21.96	1.013	1		+		4469	19793	3041	3044	5027	5027					-0.006437734993596678
DKHYGLHIK	9	Unmodified	_DKHYGLHIK_					0	0	0			REV__nc|ENSG00000177888|Q5SVQ8-2|ZBTB41	REV__nc|ENSG00000177888|Q5SVQ8-2|ZBTB41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.8069458007812	2	555.806365	1109.59818	-0.89307	-0.00049637	0.60808	0.00033797	-0.28499	-0.0001584	555.806604901083	59.553	0.91605	59.54	59.196	60.112	-0.013729					63	24	4	0	0	0	0.71772	1	5499	5499		39.253	0.49923	1	365910	+		4470	22235	3042	3045	5028	5028					0.047762539457608
DKHYGLHIK	9	Unmodified	_DKHYGLHIK_					0	0	0			REV__nc|ENSG00000177888|Q5SVQ8-2|ZBTB41	REV__nc|ENSG00000177888|Q5SVQ8-2|ZBTB41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.80615234375	2	555.806365	1109.59818	0.60306	0.00033519	-0.9158	-0.00050901	-0.31274	-0.00017382	555.8058596717976	59.48	0.90499	59.448	59.077	59.982	-0.031731					51	22	3	0	0	0	0.22631	1	5553	5553		71.296	10.324	1	344520	+		4471	22235	3042	3045	5029	5029					0.047762539457608
DKIELLIL	8	Unmodified	_DKIELLIL_					0	0	0		chr18:54361891-54362771|43|10.67|0.56|4.26|+|ENST00000648616|C18orf54,C18orf54;nc|ENSG00000166845|Q8IYD9|LAS2;ENSG00000166845|ENST00000620105|C18orf54	chr18:54361891-54362771|43|10.67|0.56|4.26|+|ENST00000648616|C18orf54,C18orf54	chr18:54361891-54362771|43|10.67|0.56|4.26|+|ENST00000648616|C18orf54,C18orf54	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8058776855469	2	478.804968	955.595384	-1.7281	-0.00082743	3.3413	0.0015998	1.6132	0.00077242	478.806439205216	41.295	1.2034	41.295	40.815	42.018	0					75	35	3	0	0	0	0.7961	1	2854	2854		17.365	0	1	280900			4472	254	3043	3046	5030	5030					0.11580985768239316
DKIELLIL	8	Unmodified	_DKIELLIL_					0	0	0		chr18:54361891-54362771|43|10.67|0.56|4.26|+|ENST00000648616|C18orf54,C18orf54;nc|ENSG00000166845|Q8IYD9|LAS2;ENSG00000166845|ENST00000620105|C18orf54	chr18:54361891-54362771|43|10.67|0.56|4.26|+|ENST00000648616|C18orf54,C18orf54	chr18:54361891-54362771|43|10.67|0.56|4.26|+|ENST00000648616|C18orf54,C18orf54	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8058166503906	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.8347	1	2599	2599		23.042	4.7181	1	371600			4473	254	3043	3046	5031	5031					0.11580985768239316
DKIGVKEILAR	11	Unmodified	_DKIGVKEILAR_					0	0	0			REV__chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	REV__chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.5916442871094	3	414.590717	1240.75032	0.66329	0.00027499	0.68121	0.00028242	1.3445	0.00055741	414.59086540346516	32.474	0.93912	32.6	32.289	33.228	0.12643					54	21	4	0	0	0	0.69687	1	2260	2260		32.034	0.39986	1	671550	+		4474	15748	3044	3047	5032	5032					0.13957609902649892
DKIIPTLL	8	Unmodified	_DKIIPTLL_					0	0	0			REV__ENST00000477173.3_1_11:35006185-35041800:+|nuORF	REV__ENST00000477173.3_1_11:35006185-35041800:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7917175292969	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.86677	1	3667	3667		27.882	1.1893	1	662040	+		4475	17813	3045	3048	5033	5033					0.10984716596760791
DKIKTFNILND	11	Unmodified	_DKIKTFNILND_					0	0	0		ENSG00000172167|ENST00000305949|MTBP	ENSG00000172167|ENST00000305949|MTBP	ENSG00000172167|ENST00000305949|MTBP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7879943847656	3	440.910115	1319.70852	-1.524	-0.00067195	0.084003	3.7038E-05	-1.44	-0.00063491	441.2447552329192	40.044	0.1237	40.05	39.99	40.114	0.0065002					4	2	2	0	0	0	0.17272	1	2496	2496		15.337	0	1	22969			4476	6747	3046	3049	5034	5034					0.061450094234714925
DKILPDVNL	9	Unmodified	_DKILPDVNL_					0	0	0		nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;ENSG00000135317|ENST00000314673|SNX14;ENST00000503608.5_1_6:86227446-86235949:-|nuORF	nc|ENSG00000135317|Q9Y5W7-2|SNX14	nc|ENSG00000135317|Q9Y5W7-2|SNX14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.809814453125	2	513.795132	1025.57571	0.051309	2.6362E-05	2.2101	0.0011355	2.2614	0.0011619	514.297723739301	51.039	0.12431	51.037	50.93	51.055	-0.0020447					4	2	2	0	0	0	0.20789	1	4333	4333		30.318	12.056	1	19725			4477	4004	3047	3050	5035	5035					0.06394609757467151
DKIQKHRKRLK	11	Unmodified	_DKIQKHRKRLK_					0	0	0		ENSG00000081923|ENST00000648908|ATP8B1	ENSG00000081923|ENST00000648908|ATP8B1	ENSG00000081923|ENST00000648908|ATP8B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.97454833984375	3	483.975676	1448.9052	0.71828	0.00034763	-2.7633	-0.0013374	-2.045	-0.00098972	483.9743432550441	16.535	0.41935	16.511	16.337	16.757	-0.024035					37	17	3	0	0	0	0.76087	1	167	167		19.627	1.7938	1	771450			4478	1475	3048	3051	5036	5036					0.19870278827715993
DKIQQPDLRKL	11	Unmodified	_DKIQQPDLRKL_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9326477050781	3	451.933143	1352.7776	-0.99129	-0.000448	-0.032148	-1.4529E-05	-1.0234	-0.00046253	451.9330862164875	100.92	2.2384	100.92	100.04	102.28	0					149	53	4	0	0	0	0.72892	1	10222	10222		26.75	3.3718	1	534780	+		4479	19491	3049	3052	5037	5037					0.11532093442997393
DKIQQPDLRKL	11	Unmodified	_DKIQQPDLRKL_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9324951171875	3	451.933143	1352.7776	2.5866	0.001169	-3.6315	-0.0016412	-1.0449	-0.00047222	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.73647	1	10948	10948		25.068	0.79185	1	1152500	+		4480	19491	3049	3052	5038	5038					0.11532093442997393
DKIQQPDLRKL	11	Unmodified	_DKIQQPDLRKL_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9325866699219	3	451.933143	1352.7776	1.2214	0.000552	-2.2747	-0.001028	-1.0533	-0.000476	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.74771	1	10775	10775		22.562	4.0305	1	1043200	+		4481	19491	3049	3052	5039	5039					0.11532093442997393
DKIQQPDLRKL	11	Unmodified	_DKIQQPDLRKL_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9327697753906	3	451.933143	1352.7776	-1.2127	-0.00054806	0.13589	6.1412E-05	-1.0768	-0.00048665	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.74771	1	10249	10249		22.562	2.5311	1	518100	+		4482	19491	3049	3052	5040	5040					0.11532093442997393
DKIQQPDLRKL	11	Unmodified	_DKIQQPDLRKL_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.93267822265625	3	451.933143	1352.7776	-1.2099	-0.00054677	0.20074	9.0723E-05	-1.0091	-0.00045605	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.69071	1	10559	10559		33.039	4.4627	1	1176100	+		4483	19491	3049	3052	5041	5041					0.11532093442997393
DKIQQPDLRKL	11	Unmodified	_DKIQQPDLRKL_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.2669677734375	3	451.933143	1352.7776	0.73764	0.00033337	-1.7723	-0.00080097	-1.0347	-0.00046761	451.932241061631	98.904	2.3627	99.06	97.538	99.901	0.15659					136	54	4	0	0	0	0.69071	1	10277	10277		33.039	5.3955	1	302530	+		4484	19491	3049	3052	5042	5042					0.11532093442997393
DKIQQPDLRKL	11	Unmodified	_DKIQQPDLRKL_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9330749511719	3	451.933143	1352.7776	-1.7713	-0.0008005	0.78925	0.00035669	-0.98202	-0.00044381	451.93340802352935	100.57	2.3737	100.74	99.884	102.26	0.17199					164	56	4	0	0	0	0.74771	1	10390	10390		22.562	6.0317	1	618930	+		4485	19491	3049	3052	5043	5043					0.11532093442997393
DKIQQPDLRKL	11	Unmodified	_DKIQQPDLRKL_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.9331970214844	3	451.933143	1352.7776	0.82688	0.0003737	-1.8545	-0.00083812	-1.0276	-0.00046443	451.9322387117762	100.27	1.763	100.6	99.729	101.49	0.33295					121	44	4	0	0	0	0.72892	1	12145	12145		26.75	0.68632	1	816050	+		4486	19491	3049	3052	5044	5044					0.11532093442997393
DKIQQPDLRKL	11	Unmodified	_DKIQQPDLRKL_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.93280029296875	3	451.933143	1352.7776	2.1819	0.00098608	-3.1717	-0.0014334	-0.98977	-0.00044731	451.9316131706083	100.36	1.9025	100.71	99.62	101.52	0.3459					138	47	4	0	0	0	0.74344	1	12250	12250		23.514	3.8874	1	885260	+		4487	19491	3049	3052	5045	5045					0.11532093442997393
DKIQQPDLRKL	11	Unmodified	_DKIQQPDLRKL_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	451.933143	1352.7776	0.74485	0.00033662	-1.5128	-0.00068369	-0.76797	-0.00034707	451.93230719280706	98.643	1.9312	99.004	97.949	99.88	0.36136	-0.066107	-0.00034962	NaN	33.039	97	47	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299880	+		4488	19491	3049	3052							0.11532093442997393
DKKASEDF	8	Unmodified	_DKKASEDF_					0	0	0			REV__ENSG00000152208|ENST00000282020|GRID2	REV__ENSG00000152208|ENST00000282020|GRID2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.22662353515625	2	470.224539	938.434526	-0.29675	-0.00013954	-3.8273	-0.0017997	-4.124	-0.0019392	470.22271364487864	23.81	1.415	23.758	23.13	24.545	-0.052114					47	37	2	0	0	0	0.87479	1	847	847		30.504	4.9296	1	30544	+		4489	20289	3050	3053	5046	5046					-0.03715388615808024
DKKFEIVKL	9	Unmodified	_DKKFEIVKL_					0	0	0		ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3406982421875	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	1	12766	12766		20.947	0.95016	1	4071000			4490	1446	3051	3054	5047	5047					0.11535748579603933
DKKFHVLLNIL	11	Unmodified	_DKKFHVLLNIL_					0	0	0		nc|ENSG00000154839|Q96BD8-2|SKA1;ENSG00000154839|ENST00000285116|SKA1	nc|ENSG00000154839|Q96BD8-2|SKA1	nc|ENSG00000154839|Q96BD8-2|SKA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.273681640625	3	447.274729	1338.80236	-1.7854	-0.00079855	-2.3253	-0.0010401	-4.1107	-0.0018386	447.27362843006824	106.96	1.1721	107.02	106.47	107.64	0.053757					124	27	6	0	0	0	0.77511	1	11433	11433		16.53	3.0219	1	15545000			4491	5300	3052	3055	5048	5048					0.14650773316429877
DKKGRAPIPP	10	Unmodified	_DKKGRAPIPP_					0	0	0		ENSG00000266074|ENST00000675386|BAHCC1;nc|ENSG00000266074|Q9P281|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.816162109375	2	539.822015	1077.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.341	1	44.115	43.615	44.615	0.7738								0	0	0	0.45132	1	3929	3929		36.447	4.9169	1				4492	8950	3053	3056	5049	5049					0.0937682697983746
DKKILKQQAPP	11	Unmodified	_DKKILKQQAPP_					0	0	0		ENSG00000254122|ENST00000398594|PCDHGB7	ENSG00000254122|ENST00000398594|PCDHGB7	ENSG00000254122|ENST00000398594|PCDHGB7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5927734375	3	422.590717	1264.75032	1.8674	0.00078915	3.7839	0.001599	5.6513	0.0023882	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.69331	1	4827	4827		32.616	2.0469	1	997830			4493	8872	3054	3057	5050	5050					0.12853609902640528
DKKILKQQAPP	11	Unmodified	_DKKILKQQAPP_					0	0	0		ENSG00000254122|ENST00000398594|PCDHGB7	ENSG00000254122|ENST00000398594|PCDHGB7	ENSG00000254122|ENST00000398594|PCDHGB7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59259033203125	3	422.590717	1264.75032	0.33778	0.00014274	3.9713	0.0016782	4.309	0.001821	422.5923327549996	56.605	1.259	56.704	56.541	57.8	0.099186					96	58	2	0	0	0	0.75457	1	4795	4795		21.032	0.71722	1	698260			4494	8872	3054	3057	5051	5051					0.12853609902640528
DKKKVLVKV	9	Unmodified	_DKKKVLVKV_					0	0	0		ENST00000579147.5_1_17:61906826-61909326:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5;ENSG00000087191|ENST00000310144|PSMC5;ENST00000581764.1_1_17:61907183-61907321:+|nuORF	ENST00000579147.5_1_17:61906826-61909326:+|nuORF	ENST00000579147.5_1_17:61906826-61909326:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.8551635742188	2	528.860609	1055.70667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.53	1	113.63	113.13	114.13	0.10217								0	0	0	0.36148	1	12178	12178		11.511	0.64546	1				4495	1570	3055	3058	5052	5052					0.18104045196173502
DKKKVLVKV	9	Unmodified	_DKKKVLVKV_					0	0	0		ENST00000579147.5_1_17:61906826-61909326:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5;ENSG00000087191|ENST00000310144|PSMC5;ENST00000581764.1_1_17:61907183-61907321:+|nuORF	ENST00000579147.5_1_17:61906826-61909326:+|nuORF	ENST00000579147.5_1_17:61906826-61909326:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.8611450195312	2	528.860609	1055.70667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.6	1	115.66	115.16	116.16	0.05954								0	0	0	0.32469	1	12310	12310		21.96	5.4867	1				4496	1570	3055	3058	5053	5053					0.18104045196173502
DKKLKELFV	9	Unmodified	_DKKLKELFV_					0	0	0			REV__nc|ENSG00000150867|P48426-2|PIP4K2A	REV__nc|ENSG00000150867|P48426-2|PIP4K2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3404541015625	2	560.342249	1118.66995	-0.40673	-0.00022791	-3.2012	-0.0017938	-3.608	-0.0020217	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.7932	1	10737	10737		23.042	1.0826	1	60162000	+		4497	20222	3056	3059	5054	5054					0.11535748579603933
DKKLKELFV	9	Unmodified	_DKKLKELFV_					0	0	0			REV__nc|ENSG00000150867|P48426-2|PIP4K2A	REV__nc|ENSG00000150867|P48426-2|PIP4K2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3406982421875	2	560.342249	1118.66995	-1.1297	-0.00063301	-2.5217	-0.001413	-3.6514	-0.002046	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.48102	1	11091	11091		52.937	11.51	1	84412000	+		4498	20222	3056	3059	5055	5055					0.11535748579603933
DKKLKELFV	9	Unmodified	_DKKLKELFV_					0	0	0			REV__nc|ENSG00000150867|P48426-2|PIP4K2A	REV__nc|ENSG00000150867|P48426-2|PIP4K2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3399047851562	2	560.342249	1118.66995	0.39664	0.00022225	-3.4771	-0.0019484	-3.0805	-0.0017261	560.3401597045467	105.5	0.96318	105.66	104.96	105.92	0.15924					88	24	4	0	0	0	0.64922	1	11236	11236		44.117	1.2525	1	1617200	+		4499	20222	3056	3059	5056	5056					0.11535748579603933
DKKLKELFV	9	Unmodified	_DKKLKELFV_					0	0	0			REV__nc|ENSG00000150867|P48426-2|PIP4K2A	REV__nc|ENSG00000150867|P48426-2|PIP4K2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.340576171875	2	560.342249	1118.66995	-1.4184	-0.00079481	-2.3281	-0.0013045	-3.7465	-0.0020993	560.3408991920513	102.18	3.487	102.32	101.71	105.2	0.13569					387	86	7	0	0	0	0.64922	1	11046	11046		44.117	0	1	120110000	+		4500	20222	3056	3059	5057	5057					0.11535748579603933
DKKLKELFV	9	Unmodified	_DKKLKELFV_					0	0	0			REV__nc|ENSG00000150867|P48426-2|PIP4K2A	REV__nc|ENSG00000150867|P48426-2|PIP4K2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3395385742188	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.76764	4	12474	12130;12323;12474;12882		34.173	5.023	1	4071000	+		4501	20222	3056	3059	5058;5059;5060;5061	5060					0.11535748579603933
DKKPEYGGG	9	Unmodified	_DKKPEYGGG_					0	0	0			REV__ENSG00000170561|ENST00000302057|IRX2	REV__ENSG00000170561|ENST00000302057|IRX2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.7342224121094	2	475.732532	949.45051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.816	1	70.363	69.863	70.863	0.54693								0	0	0	0.33576	1	7747	7747		45.972	0.020292	1		+		4502	21671	3057	3060	5062	5062					-0.026236823788963193
DKKRIIDSA	9	Unmodified	_DKKRIIDSA_					0	0	0		nc|ENSG00000175793|P31947-2|SFN;ENSG00000175793|ENST00000339276|SFN	nc|ENSG00000175793|P31947-2|SFN	nc|ENSG00000175793|P31947-2|SFN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3036499023438	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.77244	1	8655	8655		32.812	0.85756	1	13442000			4503	7036	3058	3061	5063	5063					0.07224530363305348
DKKRKKSA	8	Unmodified	_DKKRKKSA_					0	0	0			REV__ENSG00000147364|ENST00000350302|FBXO25;REV__ENST00000352684.2_1_8:356980-385646:+|nuORF	REV__ENSG00000147364|ENST00000350302|FBXO25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.80096435546875	2	480.801083	959.587613	2.0445	0.00098299	-2.6609	-0.0012794	-0.61641	-0.00029637	480.7997098356697	95.287	4.3541	95.23	94.639	98.993	-0.057526					326	101	5	0	0	0	0.79929	1	10602	10602		18.324	0.95945	1	19210000	+		4504	20066;25348	3059	3062	5064	5064					0.10620271291327299
DKKSVTSIL	9	Unmodified	_DKKSVTSIL_					0	0	0			REV__ENSG00000067533|ENST00000366932|RRP15	REV__ENSG00000067533|ENST00000366932|RRP15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.796875	2	495.795132	989.575711	3.6416	0.0018055	0.32996	0.00016359	3.9716	0.0019691	495.7951678077777	105.11	0.93385	105.34	105.01	105.95	0.2268					55	22	3	0	0	0	0.24527	1	12842	12842		69.628	0.8408	1	568440	+		4505	16544	3060	3063	5065	5065					0.08050609757481197
DKKVTRTAN	9	Unmodified	_DKKVTRTAN_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7930297851562	2	516.793455	1031.57236	1.2878	0.00066555	-1.5079	-0.00077927	-0.22004	-0.00011372	516.7925520505679	86.358	2.7525	86.284	84.67	87.423	-0.073761					114	63	3	0	0	0	0.78983	1	8906	8906		27.882	0	1	275120			4506	6825	3061	3064	5066	5066					0.057833597034687045
DKLCPPLLL	9	Unmodified	_DKLCPPLLL_					0	0	0			REV__ENST00000485008.1_1_22:24563230-24569157:+|nuORF	REV__ENST00000485008.1_1_22:24563230-24569157:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.9395751953125	2	506.298996	1010.58344	0.78624	0.00039807	-0.80215	-0.00040613	-0.015911	-8.0556E-06	506.8007979116511	62.319	0.25943	62.873	62.733	62.993	0.5545					6	5	2	0	0	0	0.20752	1	6675	6675		44.117	12.162	1	67372	+		4507	27520	3062	3065	5067	5067					0.07857045753394232
DKLDIDADEP	10	Unmodified	_DKLDIDADEP_					0	0	0			REV__ENSG00000171497|ENST00000307720|PPID	REV__ENSG00000171497|ENST00000307720|PPID	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.7473754882812	2	565.764226	1129.5139	-0.8044	-0.0004551	-3.8605	-0.0021841	-4.6649	-0.0026392	565.7616990039783	72.441	0.41632	72.826	72.583	72.999	0.38581					20	9	3	0	0	0	0.37624	1	8084	8084		45.972	10.82	1	126710	+		4508	21740	3063	3066	5068	5068					-0.04567786452321343
DKLIDLCIR	9	Unmodified	_DKLIDLCIR_					0	0	0			REV__ENSG00000177889|ENST00000318066|UBE2N	REV__ENSG00000177889|ENST00000318066|UBE2N	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.7644653320312	2	544.810259	1087.60597	-1.007	-0.0005486	0.58393	0.00031813	-0.42302	-0.00023047	544.8103494907374	31.84	0.47003	31.967	31.733	32.203	0.12642					15	10	2	0	0	0	0.20789	1	2163	2163		26.693	0	1	155670	+		4509	22236	3064	3067	5069	5069					0.06566645150974182
DKLIEKLIID	10	Unmodified	_DKLIEKLIID_					0	0	0		ENSG00000117751|ENST00000311772|PPP1R8;ENST00000236412.11_1_1:28157683-28169749:+|nuORF	ENSG00000117751|ENST00000311772|PPP1R8	ENSG00000117751|ENST00000311772|PPP1R8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.915283203125	3	400.579706	1198.71729	3.1805	0.001274	-1.4901	-0.00059689	1.6904	0.00067715	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.86802	1	12447	12447		27.047	1.9213	1	4827300			4510	3001	3065	3068	5070	5070					0.1258798305993878
DKLKHGVVTSG	11	Unmodified	_DKLKHGVVTSG_					0	0	0		ENSG00000125686|ENST00000300651|MED1	ENSG00000125686|ENST00000300651|MED1	ENSG00000125686|ENST00000300651|MED1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.8228759765625	2	570.822212	1139.62987	0.51778	0.00029556	3.1777	0.0018139	3.6954	0.0021094	570.8238767890401	61.345	0.78047	61.464	61.349	62.129	0.11901					67	35	2	0	0	0	0.69931	1	5345	5345		31.634	3.752	1	786490			4511	3406	3066	3069	5071	5071					0.06564201909031908
DKLKISSL	8	Unmodified	_DKLKISSL_					0	0	0			REV__nc|ENSG00000118307|Q6TDU7-4|DNAI7	REV__nc|ENSG00000118307|Q6TDU7-4|DNAI7	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.2784423828125	2	452.279118	902.543683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.562	1	54.536	54.036	55.036	-0.025955								0	0	0	0.29747	1	4927	4927		37.812	6.2817	1		+		4512	18302	3067	3070	5072	5072					0.08851242074331367
DKLKLFLKQH	10	Unmodified	_DKLKLFLKQH_					0	0	0		ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8927001953125	2	635.387522	1268.76049	5.133	0.0032614	4.1163	0.0026154	9.2492	0.0058769	635.3896138681998	105.51	3.0388	105.7	103.9	106.93	0.18647					181	93	4	0	0	0	0.37624	1	12866	12866		14.137	0	1	1354000			4513	8294	3068	3071	5073	5073					0.1368621762787825
DKLKPLIDL	9	Unmodified	_DKLKPLIDL_					0	0	0			REV__ENSG00000155816|ENST00000319653|FMN2	REV__ENSG00000155816|ENST00000319653|FMN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.8574829101562	2	527.828975	1053.6434	0.26435	0.00013953	-3.9954	-0.0021089	-3.731	-0.0019693	528.3273044269309	37.812	1.0387	37.911	37.623	38.661	0.099277					64	36	2	0	0	0	0.20789	1	2167	2167		18.262	3.3972	1	251460	+		4514	20446	3069	3072	5074	5074					0.11872059688289482
DKLKTINKT	9	Unmodified	_DKLKTINKT_					0	0	0			REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.820556640625	2	530.821681	1059.62881	1.1117	0.00059012	-2.5221	-0.0013388	-1.4104	-0.00074865	530.8202358745281	82.61	1.5277	82.544	82.018	83.546	-0.066185					83	35	4	0	0	0	0.71772	1	8373	8373		39.253	6.4404	1	1339600	+		4515	19568	3070	3073	5075	5075					0.10137987540110771
DKLKTINKT	9	Unmodified	_DKLKTINKT_					0	0	0			REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8203735351562	2	530.821681	1059.62881	0.37543	0.00019929	-1.3756	-0.00073019	-1.0002	-0.0005309	530.8207758612427	79.518	0.93618	79.934	79.317	80.253	0.41621					53	21	3	0	0	0	0.54908	1	9119	9119		49.536	3.0793	1	1028200	+		4516	19568	3070	3073	5076	5076					0.10137987540110771
DKLLLPVA	8	Unmodified	_DKLLLPVA_					0	0	0			REV__ENST00000530275.2_1_1:39875496-39875574:+|nuORF	REV__ENST00000530275.2_1_1:39875496-39875574:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30010986328125	2	434.778754	867.542954	1.1505	0.00050022	2.0146	0.00087592	3.1651	0.0013761	434.779601195486	72.086	1.3688	72.126	70.999	72.368	0.040222					94	63	2	0	0	0	0.4196	1	6818	6818		18.324	0	1	110420	+		4517	28281	3071	3074	5077	5077					0.10388447425270897
DKLLPALL	8	Unmodified	_DKLLPALL_					0	0	0			REV__ENST00000487195.5_1_13:46917522-46924493:-|nuORF	REV__ENST00000487195.5_1_13:46917522-46924493:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.2705993652344	2	441.786579	881.558604	-0.22405	-9.8982E-05	0.17697	7.8182E-05	-0.04708	-2.0799E-05	441.7864951799453	60.749	1.0406	61.302	60.965	62.006	0.55323					55	30	3	0	0	0	0.4196	1	6555	6555		0.90815	0	1	1546800	+		4518	17340	3072	3075	5078	5078					0.11308733942325944
DKLPILLLILV	11	Unmodified	_DKLPILLLILV_					0	0	0			REV__nc|ENSG00000139370|Q8N697-2|SLC15A4	REV__nc|ENSG00000139370|Q8N697-2|SLC15A4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.28924560546875	3	417.287975	1248.8421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.675	1	72.717	72.217	73.217	0.042114								0	0	0	0.56276	1	7000	7000		8.7993	1.3996	1		+		4519	19538	3073	3076	5079	5079					0.22762900267116493
DKLPILLLILV	11	Unmodified	_DKLPILLLILV_					0	0	0			REV__nc|ENSG00000139370|Q8N697-2|SLC15A4	REV__nc|ENSG00000139370|Q8N697-2|SLC15A4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2879333496094	3	417.287975	1248.8421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.17	1	73.212	72.712	73.712	0.042114								0	0	0	0.56276	1	7063	7063		17.833	1.8264	1		+		4520	19538	3073	3076	5080	5080					0.22762900267116493
DKLPIRGIKR	10	Unmodified	_DKLPIRGIKR_					0	0	0			REV__nc|ENSG00000169851|O60245|PCDH7	REV__nc|ENSG00000169851|O60245|PCDH7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	599.3108520507812	2	598.385314	1194.75608	-1.9026	-0.0011385	-3.9964	-0.0023914	-5.8991	-0.0035299	598.382916950216	41.981	1.3246	42.679	42.307	43.632	0.69754					74	32	4	0	0	0	0.37624	1	3711	3711		12.207	0	1	1992800	+		4521	21605	3074	3077	5081	5081					0.16648753204958666
DKLQNALEKMD	11	Unmodified	_DKLQNALEKMD_					0	0	0			REV__ENSG00000141469|ENST00000321925|SLC14A1	REV__ENSG00000141469|ENST00000321925|SLC14A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.779541015625	3	435.555344	1303.6442	0.16693	7.2709E-05	3.6879	0.0016063	3.8548	0.001679	435.5568887945998	40.549	0.85238	40.518	40.215	41.067	-0.030991					54	24	4	0	0	0	0.17243	1	2875	2875		17.167	2.3879	1	968040	+		4522	19689	3075	3078	5082	5082					0.004524862749804015
DKLQPVLRKL	10	Unmodified	_DKLQPVLRKL_					0	0	0		nc|ENSG00000188916|Q6ZSG2-2|INSYN2A;ENSG00000188916|ENST00000522781|INSYN2A	nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9296569824219	3	403.92744	1208.76049	2.3249	0.0009391	3.1739	0.001282	5.4989	0.0022211	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.8492	3	3882	3820;3882;3978		24.232	6.3987	1	2948200			4523	7972	3076	3079	5083;5084;5085	5084					0.16446217627890292
DKLQPVLRKL	10	Unmodified	_DKLQPVLRKL_					0	0	0		nc|ENSG00000188916|Q6ZSG2-2|INSYN2A;ENSG00000188916|ENST00000522781|INSYN2A	nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9295349121094	3	403.92744	1208.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.233	1	48.23	47.73	48.73	-0.002449								0	0	0	0.45132	1	4002	4002		25.126	7.9592	1				4524	7972	3076	3079	5086	5086					0.16446217627890292
DKLQPVLRKL	10	Unmodified	_DKLQPVLRKL_					0	0	0		nc|ENSG00000188916|Q6ZSG2-2|INSYN2A;ENSG00000188916|ENST00000522781|INSYN2A	nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.92938232421875	3	403.92744	1208.76049	0.5143	0.00020774	4.1381	0.0016715	4.6524	0.0018792	403.92898888715627	45.158	1.872	45.621	44.495	46.367	0.46313					165	45	4	0	0	0	0.85783	2	4160	4160;4171		15.921	2.4127	1	5214800			4525	7972	3076	3079	5087;5088	5087					0.16446217627890292
DKLRISTK	8	Unmodified	_DKLRISTK_					0	0	0		nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;ENSG00000136848|ENST00000408936|DAB2IP	nc|ENSG00000136848|Q5VWQ8-3|DAB2IP	nc|ENSG00000136848|Q5VWQ8-3|DAB2IP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2435302734375	2	480.795466	959.57638	0.77608	0.00037313	3.4646	0.0016658	4.2407	0.0020389	480.7970934430099	33.097	0.25338	33.267	33.103	33.356	0.16971					9	5	2	0	0	0	0.4196	1	2338	2338		20.947	0	1	70750			4526	4143	3077	3080	5089	5089					0.0949744919718114
DKLTKVYKD	9	Unmodified	_DKLTKVYKD_					0	0	0		nc|ENSG00000107331|Q9BZC7|ABCA2;ENSG00000107331|ENST00000341511|ABCA2;nc|ENSG00000107331|Q9BZC7-4|ABCA2;ENST00000487109.5_1_9:139906084-139911410:-|nuORF;ENST00000459850.5_1_9:139905575-139923366:-|nuORF;nc|ENSG00000107331|Q9BZC7-2|ABCA2	nc|ENSG00000107331|Q9BZC7|ABCA2	nc|ENSG00000107331|Q9BZC7|ABCA2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.3107299804688	2	555.313689	1108.61282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.119	1	60.51	60.01	61.01	0.39077								0	0	0	0.29796	1	6364	6364		31.53	3.6476	1				4527	2343	3078	3081	5090	5090					0.062862813032325
DKLWRKRKPP	10	Unmodified	_DKLWRKRKPP_					0	0	0		nc|ENSG00000126261|Q9UBT2-2|UBA2;ENSG00000126261|ENST00000246548|UBA2	nc|ENSG00000126261|Q9UBT2-2|UBA2	nc|ENSG00000126261|Q9UBT2-2|UBA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9382629394531	3	441.938451	1322.79352	-0.63554	-0.00028087	3.7441	0.0016547	3.1086	0.0013738	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.86446	1	4680	4680		30.569	10.538	1	409610			4528	3451	3079	3082	5091	5091					0.1450384447059605
DKLYFACKHLQ	11	Unmodified	_DKLYFACKHLQ_					0	0	0			REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.792724609375	3	455.904307	1364.69109	-1.2668	-0.00057753	4.0684	0.0018548	2.8016	0.0012773	455.907221127981	37.613	0.10667	37.629	37.545	37.651	0.016563					4	2	2	0	0	0	0.17567	1	2166	2166		24.276	3.9609	1	18121	+		4529	28012	3080	3083	5092	5092					0.023333906168090834
DKLYWCDAKQS	11	Unmodified	_DKLYWCDAKQS_					0	0	0		nc|ENSG00000138798|P01133-2|EGF;nc|ENSG00000138798|P01133-3|EGF;ENSG00000138798|ENST00000265171|EGF	nc|ENSG00000138798|P01133-2|EGF	nc|ENSG00000138798|P01133-2|EGF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.8817443847656	3	452.879939	1355.61799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.211	1	18.286	17.786	18.786	0.075441								0	0	0	0.56276	1	263	263		21.78	3.2494	1				4530	4335	3081	3084	5093	5093					-0.04559782896467368
DKMEVDLSEPP	11	Unmodified	_DKMEVDLSEPP_					0	0	0		nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.2960205078125	2	630.294836	1258.57512	0.64029	0.00040357	2.8333	0.0017858	3.4736	0.0021894	630.2965544942194	23.374	0.99222	23.435	23.057	24.05	0.060431					84	35	3	0	0	0	0.70737	1	781	781		30.318	1.1477	1	334210			4531	2507	3082	3085	5094	5094					-0.043825977445294484
DKMPGRVV	8	Unmodified	_DKMPGRVV_					0	0	0		ENSG00000128965|ENST00000617768|CHAC1;nc|ENSG00000128965|Q9BUX1-2|CHAC1	ENSG00000128965|ENST00000617768|CHAC1	ENSG00000128965|ENST00000617768|CHAC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.2481384277344	2	451.249837	900.485122	-0.14165	-6.3919E-05	-2.2206	-0.0010021	-2.3623	-0.001066	451.24867992302364	67.749	1.1743	67.771	67.401	68.576	0.021599					102	53	2	0	0	0	0.90465	1	6378	6378		40.573	1.7665	1	167670			4532	3569	3083	3086	5095	5095					0.03089862228216589
DKMPGRVV	8	Unmodified	_DKMPGRVV_					0	0	0		ENSG00000128965|ENST00000617768|CHAC1;nc|ENSG00000128965|Q9BUX1-2|CHAC1	ENSG00000128965|ENST00000617768|CHAC1	ENSG00000128965|ENST00000617768|CHAC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2483215332031	2	451.249837	900.485122	-0.60944	-0.00027501	-1.6864	-0.00076097	-2.2958	-0.001036	451.24890898084885	67.67	1.2739	67.634	67.25	68.524	-0.035698					111	49	3	0	0	0	0.884	1	6522	6522		33.516	8.0654	1	185140			4533	3569	3083	3086	5096	5096					0.03089862228216589
DKMRKRRVL	9	Unmodified	_DKMRKRRVL_					0	0	0			REV__ENST00000446425.2_1_2:24150475-24181223:+|nuORF	REV__ENST00000446425.2_1_2:24150475-24181223:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2530517578125	3	401.24852	1200.72373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.76	1	113.78	113.28	114.28	0.020027								0	0	0	0.30721	1	13734	13734		28.081	6.3957	1		+		4534	26806	3084	3087	5097	5097					0.1313964253033646
DKNDHLYI	8	Unmodified	_DKNDHLYI_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.250732421875	2	509.253631	1016.49271	0.0098394	5.0107E-06	-3.3	-0.0016805	-3.2901	-0.0016755	509.2517561622594	45.726	0.99979	46.621	46.327	47.327	0.89542					60	24	3	0	0	0	0.93786	1	4355	4355		53.351	2.016	1	2046500			4535	2000	3085	3088	5098	5098					-0.014877069705448775
DKNEVAAEVA	10	Unmodified	_DKNEVAAEVA_					0	0	0		ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENSG00000166986|ENST00000262027|MARS1;ENST00000545888.6_1_12:57909994-57910361:+|nuORF	ENST00000537638.6_1_12:57905855-57911076:+|nuORF	ENST00000537638.6_1_12:57905855-57911076:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.2599487304688	2	523.261653	1044.50875	0.5992	0.00031354	-3.2901	-0.0017216	-2.6909	-0.001408	523.7604804784513	60.52	0.95633	60.487	59.981	60.938	-0.032513					74	26	4	0	0	0	0.86471	1	5714	5714		30.318	0	1	391710			4536	6257	3086	3089	5099	5099					-0.011720455242993921
DKNLTVSVH	9	Unmodified	_DKNLTVSVH_					0	0	0		nc|ENSG00000244731|P0C0L4-2|C4A;ENSG00000244731|ENST00000428956|C4A;ENSG00000224389|ENST00000435363|C4B	nc|ENSG00000244731|P0C0L4-2|C4A	nc|ENSG00000244731|P0C0L4-2|C4A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.28936767578125	2	506.774731	1011.53491	-1.0014	-0.00050746	0.82826	0.00041974	-0.17309	-8.772E-05	506.7748505131262	29.698	0.52073	29.726	29.487	30.008	0.028618					16	11	2	0	0	0	0.20789	1	1883	1883		32.812	0	1	76684			4537	8825	3087	3090	5100	5100					0.02960268437857394
DKNNQRLKSL	10	Unmodified	_DKNNQRLKSL_					0	0	0			REV__nc|ENSG00000151575|Q8N6V9-2|TEX9	REV__nc|ENSG00000151575|Q8N6V9-2|TEX9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.90289306640625	3	405.898321	1214.67313	-0.38703	-0.00015709	3.9527	0.0016044	3.5656	0.0014473	405.89983412596115	21.954	0.58343	21.895	21.71	22.293	-0.058668					24	20	2	0	0	0	0.83456	1	685	685		37.508	9.4267	1	26802	+		4538	20259	3088	3091	5101	5101					0.07438391686309842
DKNNQRLKSL	10	Unmodified	_DKNNQRLKSL_					0	0	0			REV__nc|ENSG00000151575|Q8N6V9-2|TEX9	REV__nc|ENSG00000151575|Q8N6V9-2|TEX9	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	405.898321	1214.67313	-0.38703	-0.00015709	3.9527	0.0016044	3.5656	0.0014473	405.89983412596115	21.954	0.58343	21.895	21.71	22.293	-0.058668	0.12394	0.0001924	NaN	37.508	24	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26802	+		4539	20259	3088	3091							0.07438391686309842
DKNRRAVL	8	Unmodified	_DKNRRAVL_					0	0	0		ENST00000375290.6_3_9:98215758-98232201:-|nuORF;nc|ENSG00000185920|Q13635-4|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-2|PTCH1;ENSG00000185920|ENST00000331920|PTCH1	ENST00000375290.6_3_9:98215758-98232201:-|nuORF	ENST00000375290.6_3_9:98215758-98232201:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.35675048828125	2	486.290882	970.567212	0.17712	8.6133E-05	-0.29602	-0.00014395	-0.1189	-5.7818E-05	486.2916008967729	32.907	0.11227	33.017	32.921	33.034	0.10991					8	5	2	0	0	0	0.4196	1	1564	1564		26.796	0	1	44578			4540	7757	3089	3092	5102	5102					0.08075100631504029
DKPFLAPN	8	Unmodified	_DKPFLAPN_					0	0	0		ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000198513|Q8WXF7-2|ATL1	ENSG00000198513|ENST00000358385|ATL1	ENSG00000198513|ENST00000358385|ATL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.75830078125	2	451.242535	900.470518	0.86152	0.00038875	2.2392	0.0010104	3.1007	0.0013992	451.2434509161675	27.841	0.92795	27.817	27.187	28.115	-0.023556					34	22	2	0	0	0	0.4196	1	1296	1296		24.203	0	1	14483			4541	8279	3090	3093	5103	5103					0.01630113351700402
DKPHKKLF	8	Unmodified	_DKPHKKLF_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8011474609375	2	506.800552	1011.58655	-0.49395	-0.00025034	1.9681	0.00099743	1.4741	0.0007471	506.80151845061806	48.096	1.8847	48.118	47.669	49.554	0.02227					69	50	2	0	0	0	0.8621	1	3652	3652		26.693	1.1189	1	219330	+		4542	22445	3091	3094	5104	5104					0.08122056922422871
DKPILGPRR	9	Unmodified	_DKPILGPRR_					0	0	0			REV__ENST00000338230.3_2_19:53270898-53289983:-|nuORF	REV__ENST00000338230.3_2_19:53270898-53289983:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3164672851562	2	526.322183	1050.62981	0.52357	0.00027557	4.317	0.0022721	4.8406	0.0025477	526.3243374031125	58.87	2.4429	58.839	57.806	60.249	-0.030884					126	67	2	0	0	0	0.47272	1	5538	5538		53.351	2.016	1	105880	+		4543	25214	3092	3095	5105	5105					0.10652246699692114
DKPLADGIRAL	11	Unmodified	_DKPLADGIRAL_					0	0	0		nc|ENSG00000109111|Q7KZ85-3|SUPT6H;ENSG00000109111|ENST00000314616|SUPT6H	nc|ENSG00000109111|Q7KZ85-3|SUPT6H	nc|ENSG00000109111|Q7KZ85-3|SUPT6H	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.8390502929688	2	584.837862	1167.66117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.075	1	56.473	55.973	56.973	0.39872								0	0	0	0.56276	1	5777	5777		48.602	13.45	1				4544	2449	3093	3096	5106	5106					0.08404774943142002
DKPLCQHMP	9	Unmodified	_DKPLCQHMP_					0	0	0		nc|ENSG00000171509|Q9HBX9-5|RXFP1;nc|ENSG00000171509|Q9HBX9-2|RXFP1;ENSG00000171509|ENST00000307765|RXFP1;nc|ENSG00000171509|Q9HBX9-4|RXFP1	nc|ENSG00000171509|Q9HBX9-5|RXFP1	nc|ENSG00000171509|Q9HBX9-5|RXFP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.7926635742188	2	534.751887	1067.48922	-2.0757	-0.00111	4.478	0.0023946	2.4023	0.0012846	534.7540066145476	42.637	0.53991	43.334	43.132	43.672	0.69754					18	12	2	0	0	0	0.20789	1	3808	3808		24.203	4.206	1	189010			4545	6677	3094	3097	5107	5107					-0.04182416340381678
DKPLVIVK	8	Unmodified	_DKPLVIVK_					0	0	0			REV__nc|ENSG00000001617|Q13275-2|SEMA3F	REV__nc|ENSG00000001617|Q13275-2|SEMA3F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30084228515625	2	456.299853	910.585153	0.11124	5.0758E-05	2.4046	0.0010972	2.5159	0.001148	456.3008660757633	48.327	3.035	48.325	47.755	50.79	-0.002449					136	76	2	0	0	0	0.87922	1	4075	4075		31.955	1.4512	1	254750	+		4546	16041	3095	3098	5108	5108					0.1262842283365444
DKPQLGFAR	9	Unmodified	_DKPQLGFAR_					0	0	0			REV__nc|ENSG00000135636|O75923-3|DYSF	REV__nc|ENSG00000135636|O75923-3|DYSF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.6898193359375	2	516.285266	1030.55598	0.007295	3.7663E-06	-3.9283	-0.0020281	-3.921	-0.0020244	516.2830908236223	23.689	0.30262	23.637	23.487	23.79	-0.052113					11	7	2	0	0	0	0.20789	1	853	853		24.519	5.4157	1	12402	+		4547	29867	3096	3099	5109	5109					0.04192278537379934
DKPSAHRK	8	Unmodified	_DKPSAHRK_					0	0	0		ENST00000233055.8_1_2:224740449-224740497:-|nuORF	ENST00000233055.8_1_2:224740449-224740497:-|nuORF	ENST00000233055.8_1_2:224740449-224740497:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7620544433594	2	469.761958	937.509363	-1.0651	-0.00050035	-0.060913	-2.8615E-05	-1.126	-0.00052896	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.87922	1	1952	1952		31.955	0.42505	1	219920			4548	9221	3097	3100	5110	5110					0.03810838706078812
DKPSLVPL	8	Unmodified	_DKPSLVPL_					0	0	0		nc|ENSG00000127124|Q5T1R4-2|HIVEP3;ENSG00000127124|ENST00000372583|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.76116943359375	2	434.760561	867.506569	-0.5629	-0.00024473	1.0676	0.00046413	0.50466	0.00021941	434.76067973092415	87.168	2.0805	87.623	86.978	89.058	0.45429					87	50	3	0	0	0	0.80706	1	10270	10270		19.36	0	1	1032200			4549	3484	3098	3101	5111	5111					0.06751570528570028
DKPTKKTR	8	Unmodified	_DKPTKKTR_					0	0	0		ENSG00000130508|ENST00000252804|PXDN	ENSG00000130508|ENST00000252804|PXDN	ENSG00000130508|ENST00000252804|PXDN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.2927551269531	2	487.293091	972.571629	-0.95023	-0.00046304	1.0703	0.00052155	0.12007	5.8511E-05	487.2934854308046	90.996	2.8908	91.042	90.474	93.365	0.046448					155	69	4	0	0	0	0.8537	1	9512	9512		25.574	1.0549	1	2321800			4550	3648	3099	3102	5112	5112					0.0842456505440623
DKPTKVTVRIP	11	Unmodified	_DKPTKVTVRIP_					0	0	0			REV__nc|ENSG00000160803|Q9NRR5-2|UBQLN4	REV__nc|ENSG00000160803|Q9NRR5-2|UBQLN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3851318359375	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.68532	1	12850	12850		33.922	3.6039	1	19815000	+		4551	20743	3100	3103	5113	5113					0.1340560990265658
DKQDFKNK	8	Unmodified	_DKQDFKNK_					0	0	0		ENSG00000104375|ENST00000419617|STK3;nc|ENSG00000104375|Q13188-2|STK3;ENST00000517832.1_1_8:99446484-99539107:-|nuORF;ENST00000520440.1_1_8:99538957-99560377:-|nuORF	ENSG00000104375|ENST00000419617|STK3	ENSG00000104375|ENST00000419617|STK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.7661437988281	2	511.766906	1021.51926	-0.093892	-4.8051E-05	-0.42741	-0.00021874	-0.52131	-0.00026679	511.7666852667124	30.917	0.35998	30.907	30.777	31.137	-0.010656					14	8	2	0	0	0	0.90465	1	1667	1667		40.573	0	1	34394			4552	2128	3101	3104	5114	5114					0.009359819208043518
DKQGYAESSF	10	Unmodified	_DKQGYAESSF_					0	0	0			REV__ENSG00000163975|ENST00000296350|MELTF	REV__ENSG00000163975|ENST00000296350|MELTF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.25146484375	2	566.251286	1130.48802	0.032224	1.8247E-05	3.8189	0.0021625	3.8511	0.0021807	566.2532861911172	85.184	0.75889	85.624	85.269	86.028	0.43967					51	18	4	0	0	0	0.6116	1	9971	9971		49.442	1.5259	1	1450800	+		4553	21006	3102	3105	5115	5115					-0.0720063590395057
DKQKDNSNLY	10	Unmodified	_DKQKDNSNLY_					0	0	0		nc|ENSG00000142875|P22694-10|PRKACB	nc|ENSG00000142875|P22694-10|PRKACB	nc|ENSG00000142875|P22694-10|PRKACB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.800048828125	2	612.796392	1223.57823	1.0971	0.0006723	1.9252	0.0011798	3.0224	0.0018521	612.7975558435289	60.093	0.81431	60.187	59.879	60.693	0.094059					69	30	4	0	0	0	0.78666	1	5155	5155		40.058	0.80534	1	761730			4554	14971	3103	3106	5116	5116					-0.024615865755322375
DKQYMRVLQ	9	Unmodified	_DKQYMRVLQ_					0	0	0			REV__nc|ENSG00000174514|Q8N468-2|MFSD4A	REV__nc|ENSG00000174514|Q8N468-2|MFSD4A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8096313476562	2	590.81079	1179.60703	-0.8677	-0.00051265	-2.4314	-0.0014365	-3.2991	-0.0019492	590.8092605790742	59.99	1.6283	59.99	59.57	61.199	0					167	67	3	0	0	0	0.25483	1	5220	5220		68.787	0	1	3570000	+		4555	22000	3104	3107	5117	5117					0.02440859519924743
DKQYMRVLQ	9	Unmodified	_DKQYMRVLQ_					0	0	0			REV__nc|ENSG00000174514|Q8N468-2|MFSD4A	REV__nc|ENSG00000174514|Q8N468-2|MFSD4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8093872070312	2	590.81079	1179.60703	-1.4475	-0.00085521	-1.6233	-0.00095904	-3.0708	-0.0018143	590.8098678631684	57.766	1.8735	58.16	57.738	59.612	0.39408					109	45	3	0	0	0	0.073112	4	6025	6001;6025;6037;6049		99.375	8.5983	1	12390000	+		4556	22000	3104	3107	5118;5119;5120;5121	5119					0.02440859519924743
DKREQLKKSK	10	Unmodified	_DKREQLKKSK_					0	0	0		nc|ENSG00000118557|Q8TBY8-4|PMFBP1;ENSG00000118557|ENST00000237353|PMFBP1;nc|ENSG00000118557|Q8TBY8-1|PMFBP1	nc|ENSG00000118557|Q8TBY8-4|PMFBP1	nc|ENSG00000118557|Q8TBY8-4|PMFBP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.5574645996094	3	420.585854	1258.73573	0.97717	0.00041099	2.7845	0.0011711	3.7617	0.0015821	420.5868764427815	23.915	0.68401	23.533	23.153	23.837	-0.38178					36	15	4	0	0	0	0.37624	1	1064	1064		4.6433	0	1	82980			4557	3037	3105	3108	5122	5122					0.11671537754500605
DKRPRGRPRK	10	Unmodified	_DKRPRGRPRK_					0	0	0		ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;ENST00000558085.6_1_22:17082945-17119521:+|nuORF;ENST00000591299.1_2_22:17082945-17094937:+|nuORF	REV__ENSG00000055609|ENST00000262189|KMT2C;ENSG00000055609|ENST00000262189|KMT2C;ENST00000558085.6_1_22:17082945-17119521:+|nuORF	ENSG00000055609|ENST00000262189|KMT2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5924072265625	3	422.593566	1264.75887	0.27263	0.00011521	-2.376	-0.0010041	-2.1034	-0.00088887	422.5924825344156	49.575	1.8502	49.617	48.754	50.604	0.04224					166	47	4	0	0	0	0.85259	1	3775	3775		20.03	5.9445	1	2165700			4558	1027;16413;13785	3106	3109	5123	5123					0.13708021382490188
DKRPRGRPRK	10	Unmodified	_DKRPRGRPRK_					0	0	0		ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;ENST00000558085.6_1_22:17082945-17119521:+|nuORF;ENST00000591299.1_2_22:17082945-17094937:+|nuORF	REV__ENSG00000055609|ENST00000262189|KMT2C;ENSG00000055609|ENST00000262189|KMT2C;ENST00000558085.6_1_22:17082945-17119521:+|nuORF	ENSG00000055609|ENST00000262189|KMT2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59295654296875	3	422.593566	1264.75887	0.34868	0.00014735	-2.6313	-0.001112	-2.2826	-0.00096462	422.5923689571847	58.01	1.1959	58.12	57.495	58.691	0.11027					112	57	3	0	0	0	0.86151	1	4983	4983		15.333	0	1	286690			4559	1027;16413;13785	3106	3109	5124	5124					0.13708021382490188
DKRQPRLL	8	Unmodified	_DKRQPRLL_					0	0	0		ENSG00000177370|ENST00000327158|TIMM22	ENSG00000177370|ENST00000327158|TIMM22	ENSG00000177370|ENST00000327158|TIMM22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3162841796875	2	513.314358	1024.61416	0.29738	0.00015265	3.9397	0.0020223	4.2371	0.002175	513.3163353757171	43.153	1.1401	43.209	42.87	44.01	0.056744					71	27	3	0	0	0	0.86288	1	2943	2943		26.796	4.8362	1	375110			4560	7135	3107	3110	5125	5125					0.10283960182664487
DKRRFVKLYVQ	11	Unmodified	_DKRRFVKLYVQ_					0	0	0			REV__ENST00000443173.5_1_4:53612066-53617778:-|nuORF	REV__ENST00000443173.5_1_4:53612066-53617778:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7663879394531	3	484.620899	1450.84087	1.2283	0.00059526	3.6641	0.0017757	4.8924	0.002371	484.62262843643657	36.419	0.33413	36.859	36.658	36.992	0.44043					11	7	2	0	0	0	0.181	1	2869	2869		4.4131	0	1	61680	+		4561	26776	3108	3111	5126	5126					0.13348078950934905
DKRRGGPP	8	Unmodified	_DKRRGGPP_					0	0	0		ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	ENST00000442406.5_1_3:184038690-184052693:+|nuORF	ENST00000442406.5_1_3:184038690-184052693:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.8072814941406	2	441.74885	881.483148	0.23007	0.00010163	-0.072352	-3.1962E-05	0.15771	6.967E-05	441.74870081899627	19.064	0.93799	18.589	18.359	19.297	-0.47555					30	20	2	0	0	0	0.4196	1	520	520		11.511	0	1	61249			4562	2796	3109	3112	5127	5127					0.037665695346163375
DKRRHETHRHP	11	Unmodified	_DKRRHETHRHP_					0	0	0		nc|ENSG00000165246|Q8NFZ3-2|NLGN4Y;nc|ENSG00000165246|Q8NFZ3|NLGN4Y;ENSG00000165246|ENST00000684976|NLGN4Y;chrY:14522941-14622009|15|32.93|0.27|6.92|+|ENST00000643089|NLGN4Y,NLGN4Y	nc|ENSG00000165246|Q8NFZ3-2|NLGN4Y	nc|ENSG00000165246|Q8NFZ3-2|NLGN4Y	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.28155517578125	3	490.259135	1467.75557	-0.77037	-0.00037768	4.1928	0.0020556	3.4224	0.0016779	490.26297000455975	31.161	0.11051	31.222	31.138	31.248	0.060659					6	4	2	0	0	0	0.18131	1	1402	1402		12.957	0.52465	1	35176			4563	558	3110	3113	5128	5128					0.040407265378235024
DKRTIAAR	8	Unmodified	_DKRTIAAR_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7773742675781	2	465.777608	929.540663	-1.4399	-0.00067067	1.3241	0.00061674	-0.1158	-5.3938E-05	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.86677	1	7514	7514		27.882	2.3082	1	287800			4564	1611	3111	3114	5129	5129					0.07307411740180214
DKRTPKTSRA	10	Unmodified	_DKRTPKTSRA_					0	0	0		nc|nan|Q8NEG2-2|C7orf57;ENSG00000164746|ENST00000348904|C7orf57	nc|nan|Q8NEG2-2|C7orf57	nc|nan|Q8NEG2-2|C7orf57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.33251953125	2	580.330736	1158.64692	0.33139	0.00019231	2.8328	0.001644	3.1642	0.0018363	580.3322507801092	39.778	0.78229	39.866	39.53	40.312	0.088375					57	19	4	0	0	0	0.54701	1	2481	2481		52.937	5.2794	1	1035100			4565	6000	3112	3115	5130	5130					0.07394122514847368
DKRTSSEKIA	10	Unmodified	_DKRTSSEKIA_					0	0	0		nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000100731|Q96RV3-3|PCNX1;ENSG00000100731|ENST00000304743|PCNX1;nc|ENSG00000100731|Q96RV3-2|PCNX1;ENST00000554879.5_1_14:71374480-71476401:+|nuORF	nc|ENSG00000100731|Q96RV3-4|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.329833984375	2	567.809302	1133.60405	-1.3943	-0.00079167	1.5469	0.00087837	0.15269	8.6696E-05	567.8102020140273	94.336	1.6103	94.534	94.363	95.973	0.19827					49	38	2	0	0	0	0.37624	1	9744	9744		19.104	0.84144	1	140350			4566	1864	3113	3116	5131	5131					0.04259307666779932
DKRWGIKEK	9	Unmodified	_DKRWGIKEK_					0	0	0			REV__ENSG00000082781|ENST00000296181|ITGB5	REV__ENSG00000082781|ENST00000296181|ITGB5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.3330688476562	2	580.332747	1158.65094	0.57992	0.00033655	-0.80327	-0.00046616	-0.22335	-0.00012961	580.33221961555	39.911	0.8952	39.917	39.495	40.39	0.0065002					58	22	4	0	0	0	0.77696	1	2514	2514		31.53	1.0262	1	1007900	+		4567	16843	3114	3117	5132	5132					0.07796212008565817
DKSELVNITPT	11	Unmodified	_DKSELVNITPT_					0	0	0			REV__ENST00000492143.5_1_7:148514900-148516105:-|nuORF	REV__ENST00000492143.5_1_7:148514900-148516105:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7855224609375	3	406.218837	1215.63468	0.10065	4.0884E-05	4.4296	0.0017994	4.5302	0.0018403	406.22090582173445	29.869	0.61122	29.897	29.618	30.23	0.028618					16	13	2	0	0	0	0.17396	1	1911	1911		20.315	0	1	51296	+		4568	15904	3115	3118	5133	5133					0.03549041261135244
DKSGELYY	8	Unmodified	_DKSGELYY_					0	0	0			REV__nc|ENSG00000169432|Q15858-4|SCN9A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7269287109375	2	487.726915	973.439277	-0.23229	-0.00011329	-0.084196	-4.1065E-05	-0.31648	-0.00015436	487.72675271300585	51.747	1.3653	52.182	51.7	53.065	0.43505					69	32	4	0	0	0	0.67263	1	5124	5124		68.485	5.1784	1	7588700	+		4569	15736	3116	3119	5134	5134					-0.048505044730404734
DKSKHGKQRAE	11	Unmodified	_DKSKHGKQRAE_					0	0	0		nc|ENSG00000277363|Q9C0H9-2|SRCIN1;ENSG00000277363|ENST00000617146|SRCIN1	nc|ENSG00000277363|Q9C0H9-2|SRCIN1	nc|ENSG00000277363|Q9C0H9-2|SRCIN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2616882324219	3	428.565342	1282.6742	-0.17818	-7.6362E-05	-2.6193	-0.0011225	-2.7975	-0.0011989	428.8991834998797	90.991	0.1171	91.06	90.962	91.079	0.069328					4	2	2	0	0	0	0.17359	1	9351	9351		40.015	18.235	1	37783			4570	9018	3117	3120	5135	5135					0.044166060552242925
DKSKKKKSGT	10	Unmodified	_DKSKKKKSGT_					0	0	0			REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8303833007812	2	553.830037	1105.64552	-0.64284	-0.00035603	0.67277	0.0003726	0.02993	1.6576E-05	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.86471	1	8464	8464		30.318	3.6248	1	1181400	+		4571	15830	3118	3121	5136	5136					0.09692488426094314
DKSKKKKSGT	10	Unmodified	_DKSKKKKSGT_					0	0	0			REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8298950195312	2	553.830037	1105.64552	-0.78391	-0.00043415	0.76172	0.00042186	-0.02219	-1.2289E-05	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.86225	1	9036	9036		32.751	2.2469	1	1489800	+		4572	15830	3118	3121	5137	5137					0.09692488426094314
DKSKKKKSGT	10	Unmodified	_DKSKKKKSGT_					0	0	0			REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8299560546875	2	553.830037	1105.64552	-0.7821	-0.00043315	1.1388	0.00063072	0.35673	0.00019757	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.86218	2	9249	9249;9417		32.812	1.2826	1	5219600	+		4573	15830	3118	3121	5138;5139	5138					0.09692488426094314
DKSKKKKSGT	10	Unmodified	_DKSKKKKSGT_					0	0	0			REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8297729492188	2	553.830037	1105.64552	1.7761	0.00098364	-1.7781	-0.00098475	-0.0020078	-1.112E-06	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.78666	3	9182	9121;9182;9194		40.058	7.3079	1	1628400	+		4574	15830	3118	3121	5140;5141;5142	5141					0.09692488426094314
DKSKKKKSGT	10	Unmodified	_DKSKKKKSGT_					0	0	0			REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8298950195312	2	553.830037	1105.64552	1.198	0.00066348	-1.199	-0.00066405	-0.0010373	-5.7448E-07	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.78666	2	9026	9026;9206		40.058	8.1033	1	1689700	+		4575	15830	3118	3121	5143;5144	5143					0.09692488426094314
DKSKKKKSGT	10	Unmodified	_DKSKKKKSGT_					0	0	0			REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8302001953125	2	553.830037	1105.64552	1.287	0.00071279	-1.0408	-0.00057645	0.24619	0.00013635	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.8651	2	9420	9420;9578		25.574	1.3713	1	5348100	+		4576	15830	3118	3121	5145;5146	5145					0.09692488426094314
DKSKKKKSGT	10	Unmodified	_DKSKKKKSGT_					0	0	0			REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8300170898438	2	553.830037	1105.64552	0.27729	0.00015357	-0.37605	-0.00020827	-0.098758	-5.4695E-05	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.85981	1	8857	8857		35.152	3.6222	1	1844500	+		4577	15830	3118	3121	5147	5147					0.09692488426094314
DKSKKKKSGT	10	Unmodified	_DKSKKKKSGT_					0	0	0			REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	REV__chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8302001953125	2	553.830037	1105.64552	-1.3791	-0.00076379	2.0785	0.0011512	0.69944	0.00038737	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.85981	1	10793	10793		35.152	2.3396	1	5911200	+		4578	15830	3118	3121	5148	5148					0.09692488426094314
DKSKQLLSSK	10	Unmodified	_DKSKQLLSSK_					0	0	0			REV__nc|ENSG00000131351|Q9BT25-3|HAUS8	REV__nc|ENSG00000131351|Q9BT25-3|HAUS8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3305053710938	2	567.32987	1132.64519	0.4851	0.00027521	-0.68315	-0.00038757	-0.19806	-0.00011236	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.86338	1	9593	9593		31.634	0.10446	1	18558000	+		4579	29842	3119	3122	5149	5149					0.08417068706239661
DKSKSVLAR	9	Unmodified	_DKSKSVLAR_					0	0	0		ENSG00000166268|ENST00000552032|MYRFL	ENSG00000166268|ENST00000552032|MYRFL	ENSG00000166268|ENST00000552032|MYRFL	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	502.8140563964844	2	502.298373	1002.58219	-0.78552	-0.00039456	1.8006	0.00090442	1.015	0.00050985	502.79937545425935	97.665	0.5555	97.665	97.293	97.848	0					19	12	2	0	0	0	0.20789	1	9784	9784		30.318	0	1	118760			4580	6174	3120	3123	5150	5150					0.08100547708852446
DKSRQGEET	9	Unmodified	_DKSRQGEET_					0	0	0			REV__ENST00000595784.1_1_19:58598271-58598791:-|nuORF	REV__ENST00000595784.1_1_19:58598271-58598791:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.2484130859375	2	525.246535	1048.47852	0.59697	0.00031355	3.5764	0.0018785	4.1734	0.0021921	525.2482352365844	26.176	0.81921	26.221	25.836	26.655	0.045507					58	23	4	0	0	0	0.33718	1	1096	1096		62.107	7.3851	1	219750	+		4581	29252	3121	3124	5151	5151					-0.0437840418946962
DKSTRLNFRV	10	Unmodified	_DKSTRLNFRV_					0	0	0			REV__nc|ENSG00000101670|Q9Y5X9-2|LIPG	REV__nc|ENSG00000101670|Q9Y5X9-2|LIPG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3460083007812	2	618.346386	1234.67822	-0.1645	-0.00010172	-0.48965	-0.00030278	-0.65415	-0.00040449	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.8545	1	9960	9960		36.447	2.2742	1	511870	+		4582	17295	3122	3125	5152	5152					0.07026695548915995
DKSVSRRP	8	Unmodified	_DKSVSRRP_					0	0	0			REV__ENST00000467189.1_1_3:72136574-72136808:+|nuORF	REV__ENST00000467189.1_1_3:72136574-72136808:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7670593261719	2	472.76724	943.519927	0.62555	0.00029574	-0.6042	-0.00028565	0.02135	1.0094E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.89494	1	8028	8028		37.159	1.5408	1	508030	+		4583	27149	3123	3126	5153	5153					0.04590821360523023
DKTKLLCPAD	10	Unmodified	_DKTKLLCPAD_					0	0	0			REV__nc|ENSG00000135506|Q13438-6|OS9	REV__nc|ENSG00000135506|Q13438-6|OS9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.3052978515625	2	552.291899	1102.56925	0.31677	0.00017495	-3.5234	-0.0019459	-3.2066	-0.001771	552.2899341323911	64.848	0.35697	64.814	64.648	65.005	-0.034798					11	8	2	0	0	0	0.37624	1	6217	6217		32.812	0	1	72836	+		4584	19230	3124	3127	5154	5154					0.022063485344233413
DKTNFKTY	8	Unmodified	_DKTNFKTY_					0	0	0			REV__ENST00000465541.1_1_13:51524391-51530607:+|nuORF	REV__ENST00000465541.1_1_13:51524391-51530607:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.75616455078125	2	508.756007	1015.49746	1.4516	0.00073849	-1.8781	-0.00095551	-0.42655	-0.00021701	508.7548888969632	49.846	0.6993	50.691	50.395	51.094	0.84501					29	13	3	0	0	0	0.90523	1	4898	4898		40.778	1.7567	1	1081700	+		4585	19287	3125	3128	5155	5155					-0.009668228277632807
DKTQKLLEY	9	Unmodified	_DKTQKLLEY_					0	0	0		ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.3138427734375	2	569.311146	1136.60774	-0.92395	-0.00052601	0.97382	0.00055441	0.04987	2.8391E-05	569.3116655952493	38.361	0.72662	38.372	38.166	38.893	0.011173					35	16	3	0	0	0	0.24527	1	2637	2637		69.628	7.5202	1	190290			4586	6206	3126	3129	5156	5156					0.044899774406076176
DKTQKLLEY	9	Unmodified	_DKTQKLLEY_					0	0	0		ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	569.311146	1136.60774	-1.0206	-0.00058106	1.1672	0.00066449	0.14654	8.3428E-05	569.3117125739304	38.438	0.6608	38.388	38.072	38.733	-0.050369	-0.036148	0.00044872	NaN	69.628	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185860			4587	6206	3126	3129							0.044899774406076176
DKTQKLLEY	9	Unmodified	_DKTQKLLEY_					0	0	0		ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	569.311146	1136.60774	0.41202	0.00023457	-0.57588	-0.00032785	-0.16386	-9.3286E-05	569.3105608141776	38.535	0.42796	38.545	38.263	38.691	0.010708	0.12154	-0.001536	NaN	69.628	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104320			4588	6206	3126	3129							0.044899774406076176
DKTQKLLEY	9	Unmodified	_DKTQKLLEY_					0	0	0		ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	569.311146	1136.60774	0.30672	0.00017462	-0.37759	-0.00021497	-0.070872	-4.0348E-05	569.3111353367983	38.322	0.50639	38.416	38.087	38.594	0.094322	-0.0075817	-0.0013102	NaN	69.628	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100260			4589	6206	3126	3129							0.044899774406076176
DKTQKLLEY	9	Unmodified	_DKTQKLLEY_					0	0	0		ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	569.311146	1136.60774	0.37594	0.00021402	-0.41582	-0.00023673	-0.039882	-2.2705E-05	569.3110524639765	38.374	0.4283	38.316	38.108	38.536	-0.057915	-0.10779	-0.0013537	NaN	69.628	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85417			4590	6206	3126	3129							0.044899774406076176
DKTQTRTF	8	Unmodified	_DKTQTRTF_					0	0	0			REV__ENSG00000167384|ENST00000592529|ZNF180	REV__ENSG00000167384|ENST00000592529|ZNF180	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.8436584472656	2	498.759081	995.503609	-0.84098	-0.00041945	-0.030795	-1.5359E-05	-0.87178	-0.00043481	498.75900641649406	47.529	0.58643	48.452	48.238	48.824	0.92315					31	14	3	0	0	0	0.4196	1	4570	4570		37.159	0	1	895230	+		4591	21383	3127	3130	5157	5157					0.005676954037539872
DKTRKIQHII	10	Unmodified	_DKTRKIQHII_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|23|1|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|23|1|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.60528564453125	3	417.922578	1250.7459	-0.049881	-2.0846E-05	-4.2463	-0.0017746	-4.2961	-0.0017955	417.92084475998405	49.703	1.2068	49.7	49.447	50.654	-0.0030327					39	28	2	0	0	0	0.37624	1	4175	4175		16.53	6.8837	1	79735	+		4592	29612	3128	3131	5158	5158					0.13056145479754377
DKTRKIQHII	10	Unmodified	_DKTRKIQHII_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|23|1|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|23|1|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	417.922578	1250.7459	0.48651	0.00020332	-4.3021	-0.001798	-3.8156	-0.0015946	417.9208706294357	49.552	0.24276	50.012	49.871	50.114	0.45983	0.15604	-6.6257E-05	NaN	16.53	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106760	+		4593	29612	3128	3131							0.13056145479754377
DKVAAFVF	8	Unmodified	_DKVAAFVF_					0	0	0			REV__ENSG00000156049|ENST00000341700|GNA14;REV__ENSG00000156052|ENST00000286548|GNAQ	REV__ENSG00000156052|ENST00000286548|GNAQ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.7877502441406	2	448.747453	895.480354	-1.0425	-0.00046782	-3.7971	-0.0017039	-4.8396	-0.0021717	448.74580373476323	38.994	0.51513	39.549	39.319	39.834	0.55449					18	11	3	0	0	0	0.4196	1	3259	3259		31.955	0	1	122400	+		4594	20465;20466	3129	3132	5159	5159					0.028433013570861476
DKVDFVHKRVK	11	Unmodified	_DKVDFVHKRVK_					0	0	0		ENSG00000089163|ENST00000202967|SIRT4	ENSG00000089163|ENST00000202967|SIRT4	ENSG00000089163|ENST00000202967|SIRT4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7922668457031	3	457.601616	1369.78302	0.056152	2.5695E-05	3.6472	0.001669	3.7034	0.0016947	457.9373959311366	37.158	0.11402	37.098	36.999	37.113	-0.060333					4	2	2	0	0	0	0.1745	1	2101	2101		17.833	0	1	28255			4595	1614	3130	3133	5160	5160					0.11291817025471573
DKVGILQH	8	Unmodified	_DKVGILQH_					0	0	0		ENSG00000151151|ENST00000373935|IPMK	ENSG00000151151|ENST00000373935|IPMK	ENSG00000151151|ENST00000373935|IPMK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.2578125	2	455.261259	908.507966	0.60812	0.00027686	-0.66045	-0.00030068	-0.052325	-2.3821E-05	455.2608738193709	28.221	0.66887	28.197	27.944	28.613	-0.023556					20	15	2	0	0	0	0.89494	1	1356	1356		37.159	0	1	40331			4596	5099	3131	3134	5161	5161					0.050052046173163944
DKVLAPELI	9	Unmodified	_DKVLAPELI_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.29931640625	2	499.30005	996.585547	-0.40722	-0.00020332	0.62647	0.0003128	0.21926	0.00010948	499.30018703173744	77.713	0.78247	78.118	77.763	78.546	0.40531					42	18	3	0	0	0	0.6204	1	8855	8855		45.972	1.8554	1	721860			4597	7613	3132	3135	5162	5162					0.08711797762850892
DKVLHFGDR	9	Unmodified	_DKVLHFGDR_					0	0	0			REV__nc|ENSG00000173821|Q63HN8|RNF213	REV__nc|ENSG00000173821|Q63HN8|RNF213	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.78857421875	2	543.788173	1085.56179	0.086849	4.7227E-05	-0.24507	-0.00013327	-0.15822	-8.6039E-05	543.7878508528075	33.084	0.99409	33.082	32.75	33.744	-0.0016327					48	23	3	0	0	0	0.38563	1	1949	1949		58.782	4.0056	1	324090	+		4598	21953	3133	3136	5163	5163					0.02243377049035189
DKVLSVLIKKL	11	Unmodified	_DKVLSVLIKKL_					0	0	0		nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1;ENSG00000138688|ENST00000679879|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.28253173828125	3	419.283113	1254.82751	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.204	1	20.183	19.683	20.683	-0.020922								0	0	0	0.56276	1	469	469		16.53	4.3232	1				4599	14953	3134	3137	5164	5164					0.21028828118983256
DKVNRTLHIGL	11	Unmodified	_DKVNRTLHIGL_					0	0	0			REV__L1PA7_dup10097|chr11:121781424-121785258:-|1.4322006190095613|0.0265596336256901|5.75|58.0|21|1|sense	REV__L1PA7_dup10097|chr11:121781424-121785258:-|1.4322006190095613|0.0265596336256901|5.75|58.0|21|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.58148193359375	3	422.582333	1264.72517	0.70592	0.00029831	-1.5007	-0.00063419	-0.79483	-0.00033588	422.58159999345827	97.435	2.4101	97.596	96.789	99.199	0.16074					159	55	4	0	0	0	0.74763	1	10109	10109		20.315	0.28454	1	461560	+		4600	29583	3135	3138	5165	5165					0.10339555100085818
DKVNVDVNK	9	Unmodified	_DKVNVDVNK_					0	0	0			REV__ENSG00000230124|ENST00000367595|ACBD6	REV__ENSG00000230124|ENST00000367595|ACBD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.7803344726562	2	515.780013	1029.54547	0.049472	2.5516E-05	0.26703	0.00013773	0.3165	0.00016325	515.7799810559526	31.551	0.49365	31.544	31.271	31.764	-0.0061455					16	11	2	0	0	0	0.6204	1	1724	1724		45.972	6.7194	1	37196	+		4601	23754	3136	3139	5166	5166					0.03188251092274186
DKVNVDVNK	9	Unmodified	_DKVNVDVNK_					0	0	0			REV__ENSG00000230124|ENST00000367595|ACBD6	REV__ENSG00000230124|ENST00000367595|ACBD6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	515.780013	1029.54547	0.21799	0.00011243	0.08151	4.2041E-05	0.2995	0.00015448	515.7800843120455	31.544	0.52468	31.563	31.337	31.862	0.01836	0.10893	0.00031142	NaN	45.972	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32507	+		4602	23754	3136	3139							0.03188251092274186
DKVNVDVNK	9	Unmodified	_DKVNVDVNK_					0	0	0			REV__ENSG00000230124|ENST00000367595|ACBD6	REV__ENSG00000230124|ENST00000367595|ACBD6	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	515.780013	1029.54547	0.044715	2.3063E-05	-1.0354	-0.00053403	-0.99068	-0.00051097	515.7798871030025	31.661	0.53569	31.61	31.289	31.825	-0.051033	0.15592	-0.00084073	NaN	45.972	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36527	+		4603	23754	3136	3139							0.03188251092274186
DKVNVDVNK	9	Unmodified	_DKVNVDVNK_					0	0	0			REV__ENSG00000230124|ENST00000367595|ACBD6	REV__ENSG00000230124|ENST00000367595|ACBD6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	515.780013	1029.54547	-0.40762	-0.00021024	-0.096393	-4.9718E-05	-0.50401	-0.00025996	515.7799497371639	31.263	0.4363	31.343	31.121	31.558	0.079836	-0.11089	0.0001279	NaN	45.972	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49402	+		4604	23754	3136	3139							0.03188251092274186
DKVNVDVNK	9	Unmodified	_DKVNVDVNK_					0	0	0			REV__ENSG00000230124|ENST00000367595|ACBD6	REV__ENSG00000230124|ENST00000367595|ACBD6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	515.780013	1029.54547	0.4044	0.00020858	-2.0515	-0.0010581	-1.6471	-0.00084953	515.7794236505645	31.206	0.42953	31.21	31.015	31.444	0.0037212	-0.24441	-0.0018889	NaN	45.972	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86699	+		4605	23754	3136	3139							0.03188251092274186
DKVSLYKLI	9	Unmodified	_DKVSLYKLI_					0	0	0			REV__ENSG00000204952|ENST00000378079|FBXO47	REV__ENSG00000204952|ENST00000378079|FBXO47	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.8307495117188	2	539.828975	1077.6434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.676	1	43.374	42.874	43.874	0.69754								0	0	0	0.40008	1	3830	3830		58.782	0	1		+		4606	23531	3137	3140	5167	5167					0.10768059688280118
DKVSLYKLI	9	Unmodified	_DKVSLYKLI_					0	0	0			REV__ENSG00000204952|ENST00000378079|FBXO47	REV__ENSG00000204952|ENST00000378079|FBXO47	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.8296508789062	2	539.828975	1077.6434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.801	1	43.499	42.999	43.999	0.69754								0	0	0	0.19249	1	3848	3848		68.787	12.066	1		+		4607	23531	3137	3140	5168	5168					0.10768059688280118
DKVVQFFI	8	Unmodified	_DKVVQFFI_					0	0	0			REV__ENST00000407257.5_1_2:38231358-38244379:+|nuORF	REV__ENST00000407257.5_1_2:38231358-38244379:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2777099609375	2	498.28166	994.548768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.116	1	67.502	67.002	68.002	0.38515								0	0	0	0.30811	1	7341	7341		45.952	3.4775	1		+		4608	26314	3138	3141	5169	5169					0.051275459369549026
DKWDRFVK	8	Unmodified	_DKWDRFVK_					0	0	0		ENST00000572919.1_3_17:3488830-3495572:-|nuORF;ENSG00000196689|ENST00000572705|TRPV1;nc|ENSG00000196689|Q8NER1-3|TRPV1;ENST00000574085.5_1_17:3470111-3495610:-|nuORF	ENST00000572919.1_3_17:3488830-3495572:-|nuORF	ENST00000572919.1_3_17:3488830-3495572:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.288818359375	2	547.293091	1092.57163	-0.44655	-0.00024439	0.30023	0.00016432	-0.14631	-8.0077E-05	547.2931896620789	62.26	0.53449	62.289	62.102	62.636	0.029575					34	26	2	0	0	0	0.90523	1	5808	5808		40.778	0.20554	1	81635			4609	8093	3139	3142	5170	5170					0.029045650544276214
DKWDRFVK	8	Unmodified	_DKWDRFVK_					0	0	0		ENST00000572919.1_3_17:3488830-3495572:-|nuORF;ENSG00000196689|ENST00000572705|TRPV1;nc|ENSG00000196689|Q8NER1-3|TRPV1;ENST00000574085.5_1_17:3470111-3495610:-|nuORF	ENST00000572919.1_3_17:3488830-3495572:-|nuORF	ENST00000572919.1_3_17:3488830-3495572:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	547.293091	1092.57163	-0.4365	-0.00023889	0.67667	0.00037034	0.24017	0.00013144	547.292983864341	62.477	0.24897	62.467	62.287	62.536	-0.0094147	0.088952	0.00027545	NaN	40.778	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54685			4610	8093	3139	3142							0.029045650544276214
DKWLVLKDS	9	Unmodified	_DKWLVLKDS_					0	0	0			REV__ENSG00000204186|ENST00000374423|ZDBF2	REV__ENSG00000204186|ENST00000374423|ZDBF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3056640625	2	552.308406	1102.60226	0.26261	0.00014504	-3.8233	-0.0021116	-3.5607	-0.0019666	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.76255	1	9493	9493		35.618	2.8678	1	1950800	+		4611	23469	3140	3143	5171	5171					0.05506298648788288
DKWVPHELT	9	Unmodified	_DKWVPHELT_					0	0	0		ENST00000425046.1_1_3:4345037-4358927:+|nuORF;nc|ENSG00000170364|Q53H47-3|SETMAR;ENSG00000170364|ENST00000358065|SETMAR	ENST00000425046.1_1_3:4345037-4358927:+|nuORF	ENST00000425046.1_1_3:4345037-4358927:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	562.7876586914062	2	562.790381	1123.56621	-1.163	-0.00065455	1.1695	0.00065816	0.006413	3.6092E-06	562.7911139498766	49.976	0.60409	49.976	49.616	50.22	0					23	13	2	0	0	0	0.78536	1	3986	3986		29.15	1.2673	1	104650			4612	6579	3141	3144	5172	5172					0.009368414719347129
DKYAMYVQ	8	Unmodified	_DKYAMYVQ_					0	0	0			REV__ENST00000511535.1_1_4:5823489-5889136:-|nuORF	REV__ENST00000511535.1_1_4:5823489-5889136:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.24053955078125	2	509.239135	1016.46372	-0.71317	-0.00036317	3.7699	0.0019198	3.0567	0.0015566	509.2409670422204	38.376	2.2154	38.718	38.458	40.673	0.34187					95	53	2	0	0	0	0.91472	1	3273	3273		44.117	1.6423	1	937320	+		4613	15835	3142	3145	5173	5173					-0.04385567591180006
DLAEVVRHAQ	10	Unmodified	_DLAEVVRHAQ_					0	0	0		nc|ENSG00000156345|Q8IZL9-2|CDK20;ENST00000604175.5_1_9:90586022-90589430:-|nuORF;ENST00000603475.1_1_9:90586022-90589145:-|nuORF;ENST00000459720.5_1_9:90585689-90589466:-|nuORF;nc|ENSG00000156345|Q8IZL9-3|CDK20;nc|ENSG00000156345|Q8IZL9-5|CDK20;nc|ENSG00000156345|Q8IZL9-4|CDK20;ENSG00000156345|ENST00000325303|CDK20	nc|ENSG00000156345|Q8IZL9-2|CDK20	nc|ENSG00000156345|Q8IZL9-2|CDK20	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.7659912109375	2	569.304187	1136.59382	-0.31936	-0.00018181	4.288	0.0024412	3.9686	0.0022594	569.306559477976	84.486	0.55926	84.922	84.666	85.225	0.43538					26	13	3	0	0	0	0.37624	1	9796	9796		24.519	0	1	404660			4614	15013	3143	3146	5174	5174					0.030987447321649597
DLAHVVEIY	9	Unmodified	_DLAHVVEIY_					0	0	0		nc|ENSG00000104679|Q9Y3T6-3|R3HCC1;ENSG00000104679|ENST00000265806|R3HCC1	nc|ENSG00000104679|Q9Y3T6-3|R3HCC1	nc|ENSG00000104679|Q9Y3T6-3|R3HCC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.7789916992188	2	529.779482	1057.54441	0.30806	0.0001632	-0.16672	-8.8323E-05	0.14134	7.4879E-05	529.7792376545807	64.462	0.86823	64.428	63.938	64.807	-0.034256					51	22	3	0	0	0	0.39977	1	6154	6154		57.811	4.8746	1	324590			4615	2139	3144	3147	5175	5175					0.017940367233904908
DLAPLLTSA	9	Unmodified	_DLAPLLTSA_					0	0	0		ENST00000226230.7_1_17:26646143-26652544:+|nuORF	ENST00000226230.7_1_17:26646143-26652544:+|nuORF	ENST00000226230.7_1_17:26646143-26652544:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.754150390625	2	450.755475	899.496398	0.64847	0.0002923	-3.528	-0.0015903	-2.8795	-0.001298	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.76255	1	7817	7817		35.618	0.41757	1	162850			4616	9195	3145	3148	5176	5176					0.042629628033296285
DLAPLLTSA	9	Unmodified	_DLAPLLTSA_					0	0	0		ENST00000226230.7_1_17:26646143-26652544:+|nuORF	ENST00000226230.7_1_17:26646143-26652544:+|nuORF	ENST00000226230.7_1_17:26646143-26652544:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7542419433594	2	450.755475	899.496398	-1.5537	-0.00070033	-1.298	-0.00058508	-2.8517	-0.0012854	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.7932	1	7722	7722		23.042	2.0956	1	298090			4617	9195	3145	3148	5177	5177					0.042629628033296285
DLAPPSLVVLL	11	Unmodified	_DLAPPSLVVLL_					0	0	0			REV__ENSG00000204301|ENST00000375023|NOTCH4	REV__ENSG00000204301|ENST00000375023|NOTCH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.8536987304688	2	568.849907	1135.68526	1.5207	0.00086506	4.083	0.0023226	5.6038	0.0031877	568.8521463691729	102.21	3.6255	102.25	101.63	105.26	0.04319					340	87	6	0	0	0	0.69995	1	11114	11114		31.53	2.3803	1	51352000	+		4618	23479	3146	3149	5178	5178					0.12284615376825059
DLAWQARLS	9	Unmodified	_DLAWQARLS_					0	0	0			REV__ENST00000354700.9_1_1:1227787-1227973:-|nuORF	REV__ENST00000354700.9_1_1:1227787-1227973:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.281494140625	2	530.282723	1058.55089	-0.94277	-0.00049994	-0.24559	-0.00013023	-1.1884	-0.00063017	530.2823999418666	76.854	0.63409	76.854	76.429	77.063	0					42	27	2	0	0	0	0.66686	1	7005	7005		42.864	3.6114	1	109900	+		4619	25360	3147	3150	5179	5179					0.023959746747550525
DLDNFNGQ	8	Unmodified	_DLDNFNGQ_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN;ENST00000309900.11_1_16:70928350-70955090:-|nuORF	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.5652160644531	2	461.698689	921.382825	0.019888	9.1824E-06	-1.677	-0.00077429	-1.6572	-0.00076511	461.6979932364218	36.577	0.49763	36.859	36.595	37.093	0.28173					18	11	2	0	0	0	0.4196	1	2896	2896		23.042	4.7181	1	54761			4620	5428	3148	3151	5180	5180					-0.08101132309707282
DLDTMPFELG	10	Unmodified	_DLDTMPFELG_					0	0	0			REV__ENST00000404284.6_1_22:35717823-35727385:+|nuORF	REV__ENST00000404284.6_1_22:35717823-35727385:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.7614135742188	2	569.260265	1136.50598	-0.99519	-0.00056652	2.2613	0.0012873	1.2661	0.00072076	569.7625900096699	42.995	0.88801	42.959	42.56	43.448	-0.035816					59	20	4	0	0	0	0.85934	1	3320	3320		35.618	4.0885	1	332400	+		4621	26281	3149	3152	5181	5181					-0.056816369734633554
DLEASSEG	8	Unmodified	_DLEASSEG_					0	0	0			REV__ENSG00000136274|ENST00000490531|NACAD	REV__ENSG00000136274|ENST00000490531|NACAD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.1703796386719	2	404.171973	806.329392	-1.8319	-0.00074042	-2.7196	-0.0010992	-4.5516	-0.0018396	404.17089024317255	78.364	3.0861	78.491	77.697	80.783	0.12695					160	99	2	0	0	0	0.85277	1	7459	7459		25.45	2.4077	1	7642900	+		4622	19303	3150	3153	5182	5182					-0.0815192981222026
DLEQMSGRSV	10	Unmodified	_DLEQMSGRSV_					0	0	0			REV__ENSG00000102057|ENST00000218176|KCND1	REV__ENSG00000102057|ENST00000218176|KCND1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3392944335938	2	561.266413	1120.51827	-1.1945	-0.00067041	2.7351	0.0015351	1.5407	0.00086472	561.2675234581967	89.596	0.3363	90.067	89.762	90.098	0.47068					13	7	3	0	0	0	0.37624	1	10610	10610		35.152	0	1	92994	+		4623	17322	3151	3154	5183	5183					-0.03716600510392709
DLERKVESL	9	Unmodified	_DLERKVESL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.8002319335938	2	544.800946	1087.58734	-0.015943	-8.6856E-06	-0.57127	-0.00031123	-0.58721	-0.00031991	544.800461923779	45.176	0.99371	45.157	44.793	45.787	-0.018585					55	22	4	0	0	0	0.059241	5	3545	3524;3534;3545;3558;3571		104.01	28.936	1	1456500			4624	869	3152	3155	5184;5185;5186;5187;5188	5186					0.04704806780819126
DLERKVESL	9	Unmodified	_DLERKVESL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.8002319335938	2	544.800946	1087.58734	-0.15846	-8.6328E-05	-0.67191	-0.00036606	-0.83036	-0.00045238	544.8004802081173	45.113	0.87101	45.082	44.797	45.668	-0.031067					44	19	3	0	0	0	0.034797	4	3623	3613;3623;3635;3647		115.49	28.936	1	1546100			4625	869	3152	3155	5189;5190;5191;5192	5190					0.04704806780819126
DLERKVESL	9	Unmodified	_DLERKVESL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.8003540039062	2	544.800946	1087.58734	0.042384	2.3091E-05	-0.81257	-0.00044269	-0.77018	-0.0004196	544.8003545630257	45.126	0.87073	45.121	44.792	45.663	-0.0041618					49	19	4	0	0	0	0.026116	5	3571	3549;3559;3571;3584;3597		120.87	38.118	1	1563200			4626	869	3152	3155	5193;5194;5195;5196;5197	5195					0.04704806780819126
DLERKVESL	9	Unmodified	_DLERKVESL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	544.800946	1087.58734	0.059698	3.2524E-05	1.5653	0.00085279	1.625	0.00088531	545.3046552367754	45.028	0.20949	44.959	44.812	45.021	-0.06863	-0.12088	0.0024071	NaN	120.87	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43406			4627	869	3152	3155							0.04704806780819126
DLFCPHPH	8	Unmodified	_DLFCPHPH_					0	0	0			REV__ENST00000602410.1_1_2:233387240-233387915:+|nuORF	REV__ENST00000602410.1_1_2:233387240-233387915:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2182922363281	2	483.218537	964.422522	1.5048	0.00072714	-2.1269	-0.0010278	-0.62216	-0.00030064	483.2173493133452	92.876	1.1325	93.323	92.904	94.037	0.44662					63	26	3	0	0	0	0.88915	1	11070	11070		35.201	0	1	748980	+		4628	29327	3153	3156	5198	5198					-0.06111283839982207
DLFLECMPGYP	11	Unmodified	_DLFLECMPGYP_					0	0	0		ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1	ENSG00000185722|ENST00000341657|ANKFY1	ENSG00000185722|ENST00000341657|ANKFY1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	642.7819213867188	2	642.785592	1283.55663	-0.89372	-0.00057447	-2.795	-0.0017966	-3.6888	-0.0023711	642.7837003710583	40.122	0.62832	40.122	39.846	40.475	0					44	16	4	0	0	0	0.75041	1	2607	2607		21.96	0.27414	1	298990			4629	7737	3154	3157	5199	5199					-0.07380430920102299
DLFSRIRTL	9	Unmodified	_DLFSRIRTL_					0	0	0			REV__ENSG00000273749|ENST00000617928|CYFIP1	REV__ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.826416015625	2	560.827298	1119.64004	0.31128	0.00017458	-2.2307	-0.001251	-1.9194	-0.0010765	560.8258290332603	50.891	0.60448	50.923	50.638	51.243	0.032314					47	18	3	0	0	0	0.77696	1	4033	4033		31.53	3.6476	1	550950	+		4630	23992	3155	3158	5200	5200					0.08500809634278994
DLGEPFGVMRC	11	Unmodified	_DLGEPFGVMRC_					0	0	0		nc|ENSG00000090539|Q9H2X0-4|CHRD;ENST00000470150.5_1_3:184098136-184100834:+|nuORF;nc|ENSG00000090539|Q9H2X0-5|CHRD;ENSG00000090539|ENST00000204604|CHRD;nc|ENSG00000090539|Q9H2X0-2|CHRD;nc|ENSG00000090539|Q9H2X0-3|CHRD;ENST00000496527.1_1_3:184098136-184098919:+|nuORF;ENST00000460627.5_1_3:184098106-184099814:+|nuORF	nc|ENSG00000090539|Q9H2X0-4|CHRD	nc|ENSG00000090539|Q9H2X0-4|CHRD	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3313598632812	2	612.281008	1222.54746	-0.39477	-0.00024171	1.0556	0.00064634	0.66085	0.00040463	612.2818589663673	78.9	0.73285	78.956	78.675	79.408	0.056114					45	19	3	0	0	0	0.17551	1	7657	7657		30.318	4.7437	1	57787			4631	1649	3156	3159	5201	5201					-0.05490779485762687
DLGFRFDVAWF	11	Unmodified	_DLGFRFDVAWF_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44440655-44442052:+|nuORF	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.2159118652344	3	458.227667	1371.66117	0.012351	5.6594E-06	2.0973	0.00096106	2.1097	0.00096672	458.22859038037103	30.473	0.74045	30.476	29.926	30.667	0.0037212					27	16	3	0	0	0	0.17404	1	1954	1954		36.318	16.003	1	174510			4632	2976	3157	3160	5202	5202					-0.009792250568807503
DLGFRFDVAWF	11	Unmodified	_DLGFRFDVAWF_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44440655-44442052:+|nuORF	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	458.227667	1371.66117	-2.0009	-0.00091689	4.4114	0.0020214	2.4105	0.0011046	458.22963759366104	30.246	0.47089	30.246	30.063	30.534	0	-0.05766	0.0012572	NaN	36.318	38	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133510			4633	2976	3157	3160							-0.009792250568807503
DLGFRFDVAWF	11	Unmodified	_DLGFRFDVAWF_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44440655-44442052:+|nuORF	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	458.227667	1371.66117	0.22331	0.00010233	2.0462	0.00093765	2.2696	0.00104	458.22855404254375	30.266	0.41187	30.291	30.135	30.546	0.025013	-0.012417	-0.0019942	NaN	36.318	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50422			4634	2976	3157	3160							-0.009792250568807503
DLGFRFDVAWF	11	Unmodified	_DLGFRFDVAWF_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44440655-44442052:+|nuORF	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	458.227667	1371.66117	-0.28479	-0.0001305	2.7447	0.0012577	2.4599	0.0011272	458.2290445676307	30.309	0.74517	30.262	29.916	30.661	-0.047064	-0.041618	-0.0010341	NaN	36.318	32	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79039			4635	2976	3157	3160							-0.009792250568807503
DLGFRFDVAWF	11	Unmodified	_DLGFRFDVAWF_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44440655-44442052:+|nuORF	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	458.227667	1371.66117	0.35613	0.00016319	1.9836	0.00090893	2.3397	0.0010721	458.22857719236475	30.284	0.69076	30.269	30.082	30.773	-0.015167	-0.034077	-0.0020804	NaN	36.318	30	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68329			4636	2976	3157	3160							-0.009792250568807503
DLGFRFDVAWF	11	Unmodified	_DLGFRFDVAWF_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44440655-44442052:+|nuORF	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	458.227667	1371.66117	-1.2459	-0.00057089	3.7344	0.0017112	2.4885	0.0011403	458.22935978179027	30.387	0.31067	30.45	30.224	30.535	0.063122	0.14657	0.00032647	NaN	36.318	19	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50014			4637	2976	3157	3160							-0.009792250568807503
DLGFRFDVAWF	11	Unmodified	_DLGFRFDVAWF_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44440655-44442052:+|nuORF	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	458.227667	1371.66117	0.30924	0.0001417	3.493	0.0016006	3.8023	0.0017423	458.22894600584266	30.053	0.23958	30.064	30.001	30.241	0.01123	-0.23911	-5.3401E-06	NaN	36.318	11	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40065			4638	2976	3157	3160							-0.009792250568807503
DLGGARSSSS	10	Unmodified	_DLGGARSSSS_					0	0	0			REV__ENSG00000184363|ENST00000331563|PKP3	REV__ENSG00000184363|ENST00000331563|PKP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232360839844	2	468.722695	935.430838	2.8837	0.0013516	-1.6552	-0.00077582	1.2285	0.00057583	468.7218949032731	103.72	1.0883	103.99	103.67	104.76	0.26524					69	25	4	0	0	0	0.86471	1	12706	12706		30.318	2.4355	1	2233300	+		4639	22668	3158	3161	5203	5203					-0.03946058389658447
DLGGSAPLAI	10	Unmodified	_DLGGSAPLAI_					0	0	0		nc|ENSG00000240583|P29972-4|AQP1;nc|ENSG00000240583|P29972-2|AQP1;nc|ENSG00000240583|P29972-3|AQP1;ENSG00000240583|ENST00000311813|AQP1	nc|ENSG00000240583|P29972-4|AQP1	nc|ENSG00000240583|P29972-4|AQP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2538757324219	2	457.2531	912.491647	0.39374	0.00018004	-0.058535	-2.6765E-05	0.3352	0.00015327	457.25287569992605	31.678	1.0685	31.785	31.377	32.446	0.10707					47	24	3	0	0	0	0.5766	1	2168	2168		51.335	7.2187	1	574200			4640	8781	3159	3162	5204	5204					0.03190078660554718
DLGIPLEL	8	Unmodified	_DLGIPLEL_					0	0	0		ENSG00000166997|ENST00000262932|CNPY4	ENSG00000166997|ENST00000262932|CNPY4	ENSG00000166997|ENST00000262932|CNPY4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25128173828125	2	435.252569	868.490584	-1.5606	-0.00067925	-1.3016	-0.00056653	-2.8622	-0.0012458	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.884	1	7846	7846		33.516	0	1	3322700			4641	6259	3160	3163	5205	5205					0.05107864291653641
DLGLFTRGFN	10	Unmodified	_DLGLFTRGFN_					0	0	0			REV__ENSG00000147113|ENST00000398000|DIPK2B	REV__ENSG00000147113|ENST00000398000|DIPK2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.2952270507812	2	570.29583	1138.57711	-1.1333	-0.00064634	0.7585	0.00043257	-0.37484	-0.00021377	570.2960554675205	62.126	0.61243	62.116	61.801	62.413	-0.0094185					53	24	3	0	0	0	0.3985	1	5770	5770		64.207	8.7031	1	798940	+		4642	20050	3161	3164	5206	5206					0.013362438462309001
DLGLNRRSRKT	11	Unmodified	_DLGLNRRSRKT_					0	0	0			REV__ENSG00000135414|ENST00000257868|GDF11	REV__ENSG00000135414|ENST00000257868|GDF11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2376708984375	3	439.25662	1314.74803	0.94013	0.00041296	1.386	0.00060879	2.3261	0.0010218	439.2572439098686	18.367	0.18727	18.442	18.298	18.485	0.075441					6	4	2	0	0	0	0.17996	1	265	265		8.4073	2.4062	1	15227	+		4643	19218	3162	3165	5207	5207					0.10324574217543159
DLGRLRGPG	9	Unmodified	_DLGRLRGPG_					0	0	0		ENST00000559260.5_1_14:24616732-24617218:+|nuORF;ENST00000560875.1_1_14:24616681-24616891:+|nuORF	ENST00000559260.5_1_14:24616732-24617218:+|nuORF	ENST00000559260.5_1_14:24616732-24617218:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7693176269531	2	470.769783	939.525013	-0.85112	-0.00040068	-0.72759	-0.00034253	-1.5787	-0.00074321	470.7693717184576	51.01	1.4748	51.018	50.607	52.082	0.0077438					99	42	3	0	0	0	0.55097	1	4414	4414		49.442	10.189	1	770790			4644	13806	3163	3166	5208	5208					0.05283125223149909
DLGRLRGPG	9	Unmodified	_DLGRLRGPG_					0	0	0		ENST00000559260.5_1_14:24616732-24617218:+|nuORF;ENST00000560875.1_1_14:24616681-24616891:+|nuORF	ENST00000559260.5_1_14:24616732-24617218:+|nuORF	ENST00000559260.5_1_14:24616732-24617218:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7687072753906	2	470.769783	939.525013	0.25998	0.00012239	-1.8077	-0.000851	-1.5477	-0.00072861	470.7687399956873	50.307	1.239	50.754	50.307	51.546	0.4476					93	29	5	0	0	0	0.55097	1	5045	5045		49.442	1.7842	1	9098100			4645	13806	3163	3166	5209	5209					0.05283125223149909
DLGRLVLIPRN	11	Unmodified	_DLGRLVLIPRN_					0	0	0			REV__ENSG00000186765|ENST00000417245|FSCN2	REV__ENSG00000186765|ENST00000417245|FSCN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.592529296875	3	422.594461	1264.76155	-1.7406	-0.00073557	-2.5077	-0.0010597	-4.2483	-0.0017953	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.70278	1	3866	3866		31.068	5.9422	1	1126900	+		4646	22877	3164	3167	5210	5210					0.13976431996798055
DLHRYRYK	8	Unmodified	_DLHRYRYK_					0	0	0			REV__ENSG00000100116|ENST00000248924|GCAT	REV__ENSG00000100116|ENST00000248924|GCAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8087158203125	2	575.809439	1149.60433	-0.72954	-0.00042008	-0.52951	-0.00030489	-1.259	-0.00072497	575.8091320270833	37.446	0.75306	37.394	37.05	37.803	-0.052689					39	16	4	0	0	0	0.81548	1	2576	2576		20.482	0.48506	1	242790	+		4647	17141	3165	3168	5211	5211					0.03550772177277395
DLHVALHLA	9	Unmodified	_DLHVALHLA_					0	0	0			REV__ENSG00000146232|ENST00000619360|NFKBIE	REV__ENSG00000146232|ENST00000619360|NFKBIE	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7801818847656	2	494.782359	987.550165	-1.0197	-0.00050453	-3.2191	-0.0015927	-4.2388	-0.0020973	494.78063343938777	84.197	2.1372	84.197	83.134	85.271	0					93	51	2	0	0	0	0.7932	1	8041	8041		25.45	3.7478	1	184680	+		4648	19997	3166	3169	5212	5212					0.0558918002569726
DLIDVVTLV	9	Unmodified	_DLIDVVTLV_					0	0	0			REV__ENSG00000157653|ENST00000374165|C9orf43	REV__ENSG00000157653|ENST00000374165|C9orf43	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7918701171875	2	493.792058	985.569563	-1.0082	-0.00049786	0.99365	0.00049066	-0.014583	-7.2009E-06	493.79239689427686	91.796	2.3688	92.259	91.807	94.176	0.46249					119	55	4	0	0	0	0.74721	1	10914	10914		37.159	5.2042	1	3049900	+		4649	20557	3167	3170	5213	5213					0.07620091525973294
DLIHLGAKFS	10	Unmodified	_DLIHLGAKFS_					0	0	0		ENSG00000129667|ENST00000675367|RHBDF2;nc|ENSG00000129667|Q6PJF5|RHBDF2;ENST00000589582.5_1_17:74470406-74470762:-|nuORF;ENST00000590168.5_1_17:74469085-74473795:-|nuORF	ENSG00000129667|ENST00000675367|RHBDF2	ENSG00000129667|ENST00000675367|RHBDF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.8084716796875	2	550.808574	1099.60259	-0.24393	-0.00013436	-3.2508	-0.0017906	-3.4947	-0.0019249	550.8066637941864	29.97	0.60428	29.995	29.733	30.337	0.025013					23	14	2	0	0	0	0.80179	1	1543	1543		39.253	6.4404	1	101140			4650	3600	3168	3171	5214	5214					0.05677718368656315
DLIIHLNY	8	Unmodified	_DLIIHLNY_					0	0	0		nc|ENSG00000188089|Q3MJ16|PLA2G4E;ENSG00000188089|ENST00000696112|PLA2G4E;nc|ENSG00000188089|Q3MJ16-2|PLA2G4E	nc|ENSG00000188089|Q3MJ16|PLA2G4E	nc|ENSG00000188089|Q3MJ16|PLA2G4E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7749938964844	2	500.776742	999.538931	0.61522	0.00030809	-4.3169	-0.0021618	-3.7017	-0.0018537	500.7740443164604	49.06	0.68516	49.964	49.646	50.331	0.90424					39	16	3	0	0	0	0.84634	1	4795	4795		60.294	2.064	1	5673200			4651	7903	3169	3172	5215	5215					0.03914357931569157
DLIIKGISV	9	Unmodified	_DLIIKGISV_					0	0	0		ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	ENSG00000120948|ENST00000240185|TARDBP	ENSG00000120948|ENST00000240185|TARDBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.30340576171875	2	479.302593	956.590633	-0.3493	-0.00016742	0.90368	0.00043314	0.55439	0.00026572	479.3029775707549	74.562	0.48936	74.518	74.305	74.795	-0.043877					26	15	2	0	0	0	0.76419	1	7334	7334		35.152	0	1	122770			4652	3160	3170	3173	5216	5216					0.11060101625480456
DLIIKGISV	9	Unmodified	_DLIIKGISV_					0	0	0		ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	ENSG00000120948|ENST00000240185|TARDBP	ENSG00000120948|ENST00000240185|TARDBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3033752441406	2	479.302593	956.590633	-1.4101	-0.00067588	2.0913	0.0010024	0.68119	0.0003265	479.30353073423163	74.422	0.48284	74.467	74.256	74.739	0.045097					29	16	2	0	0	0	0.58063	1	7206	7206		47.96	5.0953	1	109810			4653	3160	3170	3173	5217	5217					0.11060101625480456
DLIIKGISV	9	Unmodified	_DLIIKGISV_					0	0	0		ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP	ENSG00000120948|ENST00000240185|TARDBP	ENSG00000120948|ENST00000240185|TARDBP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	479.302593	956.590633	-0.099095	-4.7496E-05	0.89645	0.00042967	0.79736	0.00038217	479.303056154607	74.673	0.44744	74.715	74.528	74.976	0.0429	0.14865	-0.00024047	NaN	47.96	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92636			4654	3160	3170	3173							0.11060101625480456
DLILNCGRPSL	11	Unmodified	_DLILNCGRPSL_					0	0	0		ENST00000395366.2_1_2:29001896-29004669:+|nuORF	ENST00000395366.2_1_2:29001896-29004669:+|nuORF	ENST00000395366.2_1_2:29001896-29004669:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8240966796875	2	600.823898	1199.63324	-0.59314	-0.00035637	1.6155	0.00097062	1.0224	0.00061425	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.47591	1	6786	6786		53.597	0.50791	1	825510			4655	11091	3171	3174	5218	5218					0.04141128691412632
DLILPTPK	8	Unmodified	_DLILPTPK_					0	0	0			REV__nc|ENSG00000117360|O43395-3|PRPF3	REV__nc|ENSG00000117360|O43395-3|PRPF3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.7774353027344	2	448.776211	895.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.335	1	67.335	66.835	67.835	0								0	0	0	0.29344	1	5953	5953		31.955	5.1588	1		+		4656	18258	3172	3175	5219	5219					0.08592143562657384
DLIQSAVLY	9	Unmodified	_DLIQSAVLY_					0	0	0		ENST00000467733.1_1_3:156262080-156272878:-|nuORF;ENSG00000114850|ENST00000265044|SSR3;nc|ENSG00000114850|Q9UNL2-2|SSR3	ENST00000467733.1_1_3:156262080-156272878:-|nuORF	ENST00000467733.1_1_3:156262080-156272878:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.7616882324219	2	511.281857	1020.54916	0.17068	8.7266E-05	-2.3922	-0.0012231	-2.2216	-0.0011358	511.2799697632269	53.907	0.46101	54.492	54.206	54.667	0.58474					15	10	2	0	0	0	0.20789	1	5481	5481		49.442	5.3247	1	160830			4657	2793	3173	3176	5220	5220					0.03970920866140659
DLIQSAVLY	9	Unmodified	_DLIQSAVLY_					0	0	0		ENST00000467733.1_1_3:156262080-156272878:-|nuORF;ENSG00000114850|ENST00000265044|SSR3;nc|ENSG00000114850|Q9UNL2-2|SSR3	ENST00000467733.1_1_3:156262080-156272878:-|nuORF	ENST00000467733.1_1_3:156262080-156272878:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	511.281857	1020.54916	0.6662	0.00034062	-0.0026725	-1.3664E-06	0.66353	0.00033925	511.28142820902235	54.12	0.50455	54.527	54.277	54.781	0.40663	0.017659	0.0012177	NaN	49.442	15	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	158520			4658	2793	3173	3176							0.03970920866140659
DLIRSQVQQLI	11	Unmodified	_DLIRSQVQQLI_					0	0	0		ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2580261230469	3	438.257626	1311.75105	-0.33086	-0.000145	0.51274	0.00022471	0.18188	7.9711E-05	438.2577888562839	29.898	1.7233	29.855	29.533	31.256	-0.043093					114	42	4	0	0	0	0.74405	1	1677	1677		23.378	0	1	610700			4659	849	3174	3177	5221	5221					0.10764404551719053
DLITEAMEIK	10	Unmodified	_DLITEAMEIK_					0	0	0		ENSG00000104375|ENST00000419617|STK3;nc|ENSG00000104375|Q13188-2|STK3;ENST00000518627.5_1_8:99565614-99613766:-|nuORF	ENSG00000104375|ENST00000419617|STK3	ENSG00000104375|ENST00000419617|STK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.8062133789062	2	581.804839	1161.59513	-0.38859	-0.00022608	-1.2941	-0.00075289	-1.6827	-0.00097897	581.8039278699252	62.852	1.4375	63.407	62.993	64.43	0.55449					85	33	4	0	0	0	0.54701	1	6796	6796		52.937	1.6012	1	1607100			4660	2128	3175	3178	5222	5222					0.020791979860632637
DLITIVAVSF	10	Unmodified	_DLITIVAVSF_					0	0	0			REV__ENSG00000164199|ENST00000405460|ADGRV1	REV__ENSG00000164199|ENST00000405460|ADGRV1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.791015625	2	539.313158	1076.61176	-0.43962	-0.00023709	1.9899	0.0010732	1.5503	0.00083608	539.3138799477491	66.105	0.44894	66.657	66.449	66.898	0.5526					17	11	3	0	0	0	0.37624	1	7216	7216		42.396	14.514	1	131210	+		4661	21051	3176	3179	5223	5223					0.07652066934338109
DLIVSALLL	9	Unmodified	_DLIVSALLL_					0	0	0		ENSG00000111254|ENST00000228850|AKAP3	ENSG00000111254|ENST00000228850|AKAP3	ENSG00000111254|ENST00000228850|AKAP3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8028259277344	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.248	1	38.19	37.69	38.69	-0.057915								0	0	0	0.31472	1	2249	2249		25.45	0	1				4662	2564	3177	3180	5224	5224					0.11580985768239316
DLIVVVASM	9	Unmodified	_DLIVVVASM_					0	0	0		nc|ENSG00000053918|P51787-2|KCNQ1;ENSG00000053918|ENST00000155840|KCNQ1	nc|ENSG00000053918|P51787-2|KCNQ1	nc|ENSG00000053918|P51787-2|KCNQ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.7693176269531	2	473.767529	945.520504	-0.26148	-0.00012388	3.7284	0.0017664	3.4669	0.0016425	473.76948167571226	28.498	0.63564	28.458	28.116	28.752	-0.039906					26	15	2	0	0	0	0.76255	1	1450	1450		35.618	5.1146	1	72176			4663	1013	3178	3181	5225	5225					0.04556479965356175
DLKEVTEEDLN	11	Unmodified	_DLKEVTEEDLN_					0	0	0		ENSG00000198130|ENST00000359678|HIBCH	ENSG00000198130|ENST00000359678|HIBCH	ENSG00000198130|ENST00000359678|HIBCH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78033447265625	3	435.54539	1303.61434	1.7902	0.00077972	-1.0385	-0.00045231	0.75174	0.00032741	435.54370672084406	36.201	0.20866	36.642	36.493	36.702	0.44043					7	4	2	0	0	0	0.17437	1	2827	2827		20.315	10.211	1	36002			4664	8242	3179	3182	5226	5226					-0.02532174189309444
DLKMKGEDL	9	Unmodified	_DLKMKGEDL_					0	0	0			REV__ENSG00000170889|ENST00000302907|RPS9	REV__ENSG00000170889|ENST00000302907|RPS9	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.7689208984375	2	524.7708	1047.52705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.753	1	49.75	49.25	50.25	-0.0030327								0	0	0	0.4027	1	4178	4178		54.776	6.8168	1		+		4665	21694	3180	3183	5227	5227					0.005183731260785862
DLKVRSVSK	9	Unmodified	_DLKVRSVSK_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.8133544921875	2	516.314023	1030.61349	-0.046988	-2.426E-05	0.67067	0.00034627	0.62368	0.00032201	516.3143957799225	103.64	1.2184	103.63	103.07	104.29	-0.0035706					70	29	3	0	0	0	0.76419	1	11233	11233		35.152	0.97948	1	638740			4666	5333	3181	3184	5228	5228					0.0994112074295117
DLLAALPLA	9	Unmodified	_DLLAALPLA_					0	0	0		ENST00000557925.1_1_19:8315741-8320784:+|nuORF;ENSG00000090661|ENST00000251363|CERS4	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.77783203125	2	448.776211	895.537869	-1.2107	-0.00054331	4.2721	0.0019172	3.0615	0.0013739	448.7780530522161	71.86	0.93866	71.94	71.575	72.514	0.080025					46	35	2	0	0	0	0.67235	1	6546	6546		42.474	0	1	128990			4667	1653	3182	3185	5229	5229					0.08592143562657384
DLLAALPLA	9	Unmodified	_DLLAALPLA_					0	0	0		ENST00000557925.1_1_19:8315741-8320784:+|nuORF;ENSG00000090661|ENST00000251363|CERS4	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	448.776211	895.537869	-0.14509	-6.5115E-05	3.2109	0.001441	3.0658	0.0013759	448.777526324872	71.979	1.0552	72.017	71.533	72.588	0.037148	0.10958	-0.00057917	NaN	42.474	62	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97446			4668	1653	3182	3185							0.08592143562657384
DLLAALPLA	9	Unmodified	_DLLAALPLA_					0	0	0		ENST00000557925.1_1_19:8315741-8320784:+|nuORF;ENSG00000090661|ENST00000251363|CERS4	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	448.776211	895.537869	0.29579	0.00013274	2.9558	0.0013265	3.2516	0.0014592	448.7772905878242	71.698	0.98316	71.739	71.299	72.282	0.040222	-0.16839	-0.00080816	NaN	42.474	63	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77650			4669	1653	3182	3185							0.08592143562657384
DLLAALPLA	9	Unmodified	_DLLAALPLA_					0	0	0		ENST00000557925.1_1_19:8315741-8320784:+|nuORF;ENSG00000090661|ENST00000251363|CERS4	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	448.776211	895.537869	-1.3158	-0.00059049	4.492	0.0020159	3.1763	0.0014254	448.7780182128123	71.676	1.032	71.807	71.417	72.449	0.13145	-0.09964	0.00057068	NaN	42.474	74	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121200			4670	1653	3182	3185							0.08592143562657384
DLLAVVVPA	9	Unmodified	_DLLAVVVPA_					0	0	0		nc|ENSG00000101298|O15079|SNPH;ENSG00000101298|ENST00000381867|SNPH	nc|ENSG00000101298|O15079|SNPH	nc|ENSG00000101298|O15079|SNPH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.7761535644531	2	448.776211	895.537869	0.48906	0.00021948	2.689	0.0012068	3.1781	0.0014262	448.77727459064977	71.648	0.93057	71.778	71.32	72.25	0.1301					72	37	2	0	0	0	0.72402	1	6540	6540		38.806	6.8513	1	133700			4671	1926	3183	3186	5230	5230					0.08592143562668753
DLLGRLVRIVS	11	Unmodified	_DLLGRLVRIVS_					0	0	0			REV__nc|ENSG00000163629|Q12923-2|PTPN13	REV__nc|ENSG00000163629|Q12923-2|PTPN13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	414.2611999511719	3	414.262712	1239.76631	0.012697	5.2598E-06	-1.7284	-0.00071601	-1.7157	-0.00071075	414.2619633265219	17.904	0.49121	17.967	17.792	18.284	0.062601					57	26	3	0	0	0	0.75121	1	288	288		21.78	0.94327	1	554770	+		4672	20947	3184	3187	5231	5231					0.1560131613955491
DLLLEPALV	9	Unmodified	_DLLLEPALV_					0	0	0			REV__ENSG00000100263|ENST00000216085|RHBDD3	REV__ENSG00000100263|ENST00000216085|RHBDD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7948303222656	2	491.794601	981.574648	-2.0246	-0.0009957	3.9467	0.001941	1.9221	0.00094526	491.79643169128343	45.478	1.3283	45.474	44.66	45.989	-0.0041618					90	30	4	0	0	0	0.7932	1	3684	3684		24.203	2.5004	1	433340	+		4673	17160	3185	3188	5232	5232					0.08312395388566074
DLLLSSIL	8	Unmodified	_DLLLSSIL_					0	0	0		ENST00000605833.1_1_10:17258201-17271901:-|nuORF	ENST00000605833.1_1_10:17258201-17271901:-|nuORF	ENST00000605833.1_1_10:17258201-17271901:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2652587890625	2	437.268219	872.521884	-2.1128	-0.00092385	-3.6603	-0.0016005	-5.7731	-0.0025244	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.86288	1	871	871		26.796	0	1	1366900			4674	14436	3186	3189	5233	5233					0.08052437325773099
DLLLYHSGGL	10	Unmodified	_DLLLYHSGGL_					0	0	0			REV__ENSG00000145626|ENST00000274278|UGT3A1	REV__ENSG00000145626|ENST00000274278|UGT3A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.3327026367188	2	544.292756	1086.57096	0.91697	0.0004991	2.5549	0.0013906	3.4719	0.0018897	544.293953956386	98.118	0.61917	98.503	98.139	98.758	0.38548					27	14	2	0	0	0	0.37624	1	11778	11778		49.442	10.635	1	212960	+		4675	19954	3187	3190	5234	5234					0.031137256147076187
DLLPQYVSL	9	Unmodified	_DLLPQYVSL_					0	0	0		ENSG00000167191|ENST00000300571|GPRC5B;nc|ENSG00000167191|Q9NZH0-2|GPRC5B	ENSG00000167191|ENST00000300571|GPRC5B	ENSG00000167191|ENST00000300571|GPRC5B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.826904296875	2	524.289682	1046.56481	1.241	0.00065063	2.9329	0.0015377	4.1738	0.0021883	524.2905594585559	99.478	1.1025	99.525	99.059	100.16	0.047523					58	25	3	0	0	0	0.20789	1	10666	10666		26.693	4.1133	1	619500			4676	6273	3188	3191	5235	5235					0.04339207383191024
DLLPVLYL	8	Unmodified	_DLLPVLYL_					0	0	0		nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1;ENSG00000105486|ENST00000263274|LIG1	nc|ENSG00000105486|P18858-2|LIG1	nc|ENSG00000105486|P18858-2|LIG1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.5785827636719	2	473.286411	944.55827	-1.4924	-0.00070635	2.2675	0.0010732	0.77504	0.00036681	473.2870272941558	34.039	0.89743	34.041	33.706	34.603	0.0026054					34	19	3	0	0	0	0.4196	1	2018	2018		20.482	11.66	1	46937			4677	2221	3189	3192	5236	5236					0.08377314222445875
DLLRKYRLRKY	11	Unmodified	_DLLRKYRLRKY_					0	0	0			REV__nc|ENSG00000183530|Q5THK1-2|PRR14L	REV__nc|ENSG00000183530|Q5THK1-2|PRR14L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.80340576171875	3	508.643815	1522.90962	0.70585	0.00035902	-2.9662	-0.0015087	-2.2603	-0.0011497	508.6424968234786	19.339	0.41279	18.869	18.7	19.113	-0.46967					11	8	2	0	0	0	0.18159	1	494	494		12.433	9.4069	1	31136	+		4678	22612	3190	3193	5237	5237					0.16907743250635576
DLLRKYRLRKY	11	Unmodified	_DLLRKYRLRKY_					0	0	0			REV__nc|ENSG00000183530|Q5THK1-2|PRR14L	REV__nc|ENSG00000183530|Q5THK1-2|PRR14L	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	508.643815	1522.90962	0.86497	0.00043996	-2.8323	-0.0014406	-1.9674	-0.0010007	508.6421965825033	19.454	0.5471	18.824	18.575	19.122	-0.6296	-0.022457	0.00012606	NaN	12.433	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57591	+		4679	22612	3190	3193							0.16907743250635576
DLLRQGHRHGS	11	Unmodified	_DLLRQGHRHGS_					0	0	0			REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|57|1|sense	REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|57|1|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	425.7748107910156	3	425.893681	1274.65921	0.42134	0.00017944	-0.49108	-0.00020915	-0.06974	-2.9702E-05	425.8937870432316	39.118	0.24977	39.129	38.935	39.184	0.011173					8	5	2	0	0	0	0.17294	1	2700	2700		14.086	2.1536	1	19348	+		4680	29621	3191	3194	5238	5238					0.03287158977900617
DLLSDEYL	8	Unmodified	_DLLSDEYL_					0	0	0			REV__ENST00000580209.1_1_18:29617215-29646074:+|nuORF	REV__ENST00000580209.1_1_18:29617215-29646074:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2364807128906	2	484.234573	966.454593	-0.25899	-0.00012541	3.3532	0.0016238	3.0943	0.0014983	484.2362631686429	84.254	0.98042	84.689	83.918	84.898	0.43537					86	23	5	0	0	0	0.91005	1	9799	9799		42.474	3.6683	1	12890000	+		4681	17297	3192	3195	5239	5239					-0.02997637675855458
DLLSLQEKVF	10	Unmodified	_DLLSLQEKVF_					0	0	0			REV__ENSG00000196136|ENST00000393078|SERPINA3	REV__ENSG00000196136|ENST00000393078|SERPINA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.332763671875	2	596.334621	1190.65469	0.85589	0.0005104	-3.7538	-0.0022385	-2.8979	-0.0017281	596.3322598839247	96.043	3.1049	96.206	95.311	98.416	0.16316					228	72	4	0	0	0	0.8608	1	9879	9879		34.173	0	1	1469100	+		4682	23094	3193	3196	5240	5240					0.06698836991745338
DLLVLAALV	9	Unmodified	_DLLVLAALV_					0	0	0			REV__ENST00000497497.1_1_10:119013719-119036774:+|nuORF	REV__ENST00000497497.1_1_10:119013719-119036774:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.79962158203125	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3415	3415		26.796	4.8362	1	1516700	+		4683	21200	3194	3197	5241	5241					0.119050031137931
DLLWPPCL	8	Unmodified	_DLLWPPCL_					0	0	0			REV__ENST00000286523.9_2_14:74206798-74226821:-|nuORF	REV__ENST00000286523.9_2_14:74206798-74226821:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.29437255859375	2	478.749139	955.483725	-0.35808	-0.00017143	1.7172	0.00082212	1.3591	0.00065069	478.749652412632	58.928	0.50207	59.32	58.983	59.485	0.39209					24	11	3	0	0	0	0.4196	1	6172	6172		37.028	0	1	501390	+		4684	24641	3195	3198	5242	5242					0.004202281394213969
DLLWSQLTLL	10	Unmodified	_DLLWSQLTLL_					0	0	0			REV__ENST00000498214.5_1_3:9965818-9972589:+|nuORF	REV__ENST00000498214.5_1_3:9965818-9972589:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.80401611328125	3	401.232418	1200.67542	-0.06229	-2.4993E-05	2.1902	0.00087878	2.1279	0.00085379	401.5675284667091	19.656	0.23012	19.027	18.892	19.122	-0.62961					6	4	2	0	0	0	0.37624	1	556	556		20.03	0.7678	1	28931	+		4685	20961	3196	3199	5243	5243					0.08311427371427271
DLMFEEMRET	10	Unmodified	_DLMFEEMRET_					0	0	0		ENSG00000240563|ENST00000498273|L1TD1	ENSG00000240563|ENST00000498273|L1TD1	ENSG00000240563|ENST00000498273|L1TD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.888671875	3	434.189784	1299.54752	-0.63083	-0.0002739	1.8469	0.00080188	1.216	0.00052799	434.19058921020184	31.721	0.51215	31.801	31.471	31.983	0.079834					19	11	2	0	0	0	0.37624	1	2188	2188		14.086	2.6314	1	90921			4686	8780	3197	3200	5244	5244					-0.09026824276429579
DLNSTSAVP	9	Unmodified	_DLNSTSAVP_					0	0	0			REV__nc|ENSG00000100979|P55058-4|PLTP	REV__nc|ENSG00000100979|P55058-4|PLTP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.2281494140625	2	452.224539	902.434526	4.5148	0.0020417	1.6899	0.0007642	6.2046	0.0028059	452.2261030001731	107	0.85062	107.15	106.81	107.66	0.14929					69	29	5	0	0	0	0.74721	1	13095	13095		37.159	4.3467	1	2327200	+		4687	17232	3198	3201	5245	5245					-0.020593886158053465
DLPEPERS	8	Unmodified	_DLPEPERS_					0	0	0		ENST00000490837.1_1_2:239103269-239112329:-|nuORF;ENST00000467133.5_1_2:239098583-239112329:-|nuORF;ENSG00000132323|ENST00000254654|ILKAP	ENST00000490837.1_1_2:239103269-239112329:-|nuORF	ENST00000490837.1_1_2:239103269-239112329:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.75494384765625	2	471.729989	941.445425	-0.9484	-0.00044739	2.0293	0.0009573	1.0809	0.00050991	471.73093778742395	47.669	0.53254	48.138	47.933	48.466	0.46941					23	13	2	0	0	0	0.4196	1	4550	4550		23.042	2.0956	1	222120			4688	3781	3199	3202	5246	5246					-0.027639862415185235
DLPERVTIL	9	Unmodified	_DLPERVTIL_					0	0	0			REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.3062744140625	2	528.308406	1054.60226	0.49305	0.00026048	-0.85328	-0.0004508	-0.36024	-0.00019032	528.3077809942157	51.713	0.6302	52.148	51.822	52.452	0.43505					38	14	3	0	0	0	0.30689	1	5161	5161		64.207	3.2353	1	1299700	+		4689	23096	3200	3203	5247	5247					0.07714298648807016
DLPKIIQLTEL	11	Unmodified	_DLPKIIQLTEL_					0	0	0			REV__ENSG00000142224|ENST00000659997|IL19	REV__ENSG00000142224|ENST00000659997|IL19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8823852539062	2	641.884478	1281.7544	-0.050098	-3.2157E-05	-3.0613	-0.001965	-3.1114	-0.0019972	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.55601	1	10230	10230		47.96	5.0953	1	3644700	+		4690	19731	3201	3204	5248	5248					0.12479654605704127
DLPLVIELA	9	Unmodified	_DLPLVIELA_					0	0	0		ENSG00000155249|ENST00000641172|OR4K1	ENSG00000155249|ENST00000641172|OR4K1	ENSG00000155249|ENST00000641172|OR4K1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957458496094	2	491.794601	981.574648	0.32756	0.00016109	1.929	0.00094865	2.2565	0.0011097	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.78536	1	3912	3912		29.15	4.9468	1	1346800			4691	5315	3202	3205	5249	5249					0.08312395388543337
DLPPKKSKDK	10	Unmodified	_DLPPKKSKDK_					0	0	0		ENSG00000125812|ENST00000338121|GZF1	ENSG00000125812|ENST00000338121|GZF1	ENSG00000125812|ENST00000338121|GZF1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.3396606445312	2	578.340238	1154.66592	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.456	1	69.522	69.022	70.022	0.065506								0	0	0	0.45132	1	6266	6266		29.17	1.0886	1				4692	3417	3203	3206	5250	5250					0.09477659085882806
DLPPTASPEPN	11	Unmodified	_DLPPTASPEPN_					0	0	0			REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.7772216796875	2	569.274761	1136.53497	0.4898	0.00027883	-0.3771	-0.00021467	0.1127	6.4158E-05	569.2744694870318	58.537	1.2979	58.647	58.343	59.641	0.11027					132	48	4	0	0	0	0.57736	1	5049	5049		46.457	1.4346	1	2907600	+		4693	18722	3204	3207	5251	5251					-0.027837763527941206
DLPSVITFG	9	Unmodified	_DLPSVITFG_					0	0	0			REV__nc|ENSG00000131374|Q92609|TBC1D5	REV__nc|ENSG00000131374|Q92609|TBC1D5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2341003417969	2	474.755475	947.496398	-0.82292	-0.00039069	1.5388	0.00073057	0.71592	0.00033989	474.7560999353742	19.757	0.46074	19.128	18.983	19.443	-0.6296					14	9	2	0	0	0	0.20789	1	581	581		40.573	16.37	1	46948	+		4694	18946	3205	3208	5252	5252					0.020549628033450063
DLPVVKKNIK	10	Unmodified	_DLPVVKKNIK_					0	0	0			REV__ENSG00000122512|ENST00000265849|PMS2	REV__ENSG00000122512|ENST00000265849|PMS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3663940429688	2	577.368798	1152.72304	-0.31736	-0.00018324	-3.4769	-0.0020075	-3.7943	-0.0021907	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.85934	1	10443	10443		35.618	4.0885	1	6617600	+		4695	18501	3206	3209	5253	5253					0.1527912636227029
DLQEGYQSTG	10	Unmodified	_DLQEGYQSTG_					0	0	0		chr2:127481169-127486553|28|11.36|0.7|4.02|-|2|None,IWS1|1	chr2:127481169-127486553|28|11.36|0.7|4.02|-|2|None,IWS1|1	chr2:127481169-127486553|28|11.36|0.7|4.02|-|2|None,IWS1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.238037109375	2	549.240918	1096.46728	0.40902	0.00022465	0.1581	8.6836E-05	0.56712	0.00031149	549.2408821601733	56.714	0.92148	56.685	56.397	57.318	-0.02866					52	33	2	0	0	0	0.21391	1	5181	5181		82.75	8.4954	1	614600			4696	306	3207	3210	5254	5254					-0.07709226283623138
DLQEGYQSTG	10	Unmodified	_DLQEGYQSTG_					0	0	0		chr2:127481169-127486553|28|11.36|0.7|4.02|-|2|None,IWS1|1	chr2:127481169-127486553|28|11.36|0.7|4.02|-|2|None,IWS1|1	chr2:127481169-127486553|28|11.36|0.7|4.02|-|2|None,IWS1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.2428588867188	2	549.240918	1096.46728	-0.12487	-6.8586E-05	0.7112	0.00039062	0.58632	0.00032203	549.241206528311	56.572	1.1472	56.605	56.484	57.632	0.033184					61	42	2	0	0	0	0.19099	2	5125	5125;5165		88.177	23.97	1	802230			4697	306	3207	3210	5255;5256	5255					-0.07709226283623138
DLQGSRVLY	9	Unmodified	_DLQGSRVLY_					0	0	0		nc|ENSG00000073350|Q6P1M3-3|LLGL2;nc|ENSG00000073350|Q6P1M3-2|LLGL2;ENSG00000073350|ENST00000392550|LLGL2;ENST00000545227.6_1_17:73554011-73570984:+|nuORF	nc|ENSG00000073350|Q6P1M3-3|LLGL2	nc|ENSG00000073350|Q6P1M3-3|LLGL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.7815551757812	2	525.782556	1049.55056	-0.2585	-0.00013591	-0.31346	-0.00016481	-0.57195	-0.00030072	525.7823128170928	49.629	0.70844	49.605	49.235	49.943	-0.024029					34	15	3	0	0	0	0.6204	1	4256	4256		45.972	5.3996	1	247480			4698	1291	3208	3211	5257	5257					0.027765549549030766
DLQLPLSLI	9	Unmodified	_DLQLPLSLI_					0	0	0			REV__ENST00000525898.5_1_11:44609032-44626629:+|nuORF	REV__ENST00000525898.5_1_11:44609032-44626629:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.31304931640625	2	506.307875	1010.6012	-0.31621	-0.0001601	2.6085	0.0013207	2.2923	0.0011606	506.30917765432565	52.06	1.3701	51.984	51.238	52.608	-0.075367					75	42	2	0	0	0	0.7932	1	4129	4129		26.693	2.4902	1	144070	+		4699	28192	3209	3212	5258	5258					0.09632084279917308
DLQLVLIL	8	Unmodified	_DLQLVLIL_					0	0	0		ENST00000534624.5_1_11:122931950-122932924:-|nuORF	ENST00000534624.5_1_11:122931950-122932924:-|nuORF	ENST00000534624.5_1_11:122931950-122932924:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8005065917969	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.84341	1	2963	2963		24.203	2.2429	1	942760			4700	13412	3210	3213	5259	5259					0.11905003113804469
DLQQQALHS	9	Unmodified	_DLQQQALHS_					0	0	0		nc|ENSG00000186272|P17021-3|ZNF17;ENST00000602050.1_1_19:57930944-57932846:+|nuORF;nc|ENSG00000186272|P17021|ZNF17;ENSG00000186272|ENST00000307658|ZNF17	nc|ENSG00000186272|P17021-3|ZNF17	nc|ENSG00000186272|P17021-3|ZNF17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8018798828125	2	520.261988	1038.50942	0.75093	0.00039068	3.2631	0.0016977	4.0141	0.0020884	520.2637120801378	87.052	0.62263	87.498	87.102	87.724	0.44628					24	14	2	0	0	0	0.20789	1	10161	10161		20.947	0	1	97846			4701	7788	3211	3214	5260	5260					-0.008292060845633387
DLRGGLPRMR	10	Unmodified	_DLRGGLPRMR_					0	0	0			REV__ENSG00000089116|ENST00000261731|LHX5	REV__ENSG00000089116|ENST00000261731|LHX5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	586.380126953125	2	585.829849	1169.64514	0.49853	0.00029205	0.2335	0.00013679	0.73203	0.00042884	585.8298665984416	57.52	1.1205	57.626	57.378	58.498	0.1055					94	54	2	0	0	0	0.37624	1	4887	4887		24.519	0	1	190780	+		4702	16962	3212	3215	5261	5261					0.06710790225224628
DLRGTNAYTE	10	Unmodified	_DLRGTNAYTE_					0	0	0			REV__ENST00000405257.1_1_6:4703010-4703685:+|nuORF	REV__ENST00000405257.1_1_6:4703010-4703685:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.2763671875	2	570.27001	1138.52547	0.0095359	5.4381E-06	3.2981	0.0018808	3.3077	0.0018863	570.2721146473531	57.865	0.8409	57.836	57.527	58.368	-0.029861					60	21	5	0	0	0	0.73395	1	5389	5389		42.864	2.0861	1	270170	+		4703	26287	3213	3216	5262	5262					-0.03825544638334577
DLRISINTF	9	Unmodified	_DLRISINTF_					0	0	0		ENSG00000152402|ENST00000526355|GUCY1A2;nc|ENSG00000152402|P33402-3|GUCY1A2;nc|ENSG00000152402|P33402-2|GUCY1A2	ENSG00000152402|ENST00000526355|GUCY1A2	ENSG00000152402|ENST00000526355|GUCY1A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.3584594726562	2	539.798206	1077.58186	-0.18302	-9.8792E-05	0.23188	0.00012517	0.048865	2.6377E-05	539.7982028260989	37.514	0.93634	37.828	37.453	38.389	0.31312					45	23	3	0	0	0	0.20789	1	2990	2990		27.882	2.3082	1	394620			4704	5171	3214	3217	5263	5263					0.0461712798901317
DLRKLLEP	8	Unmodified	_DLRKLLEP_					0	0	0			REV__nc|ENSG00000164818|Q86Y56-2|DNAAF5	REV__nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2980041503906	2	492.297842	982.581131	0.010803	5.3184E-06	-0.45723	-0.0002251	-0.44643	-0.00021978	492.2974871625459	54.049	1.8007	54.456	53.861	55.661	0.40663					79	42	3	0	0	0	0.9283	1	5466	5466		49.442	3.4693	1	1817100	+		4705	21118	3215	3218	5264	5264					0.08914333339942004
DLRLALKEQLN	11	Unmodified	_DLRLALKEQLN_					0	0	0			REV__ENSG00000186103|ENST00000334384|ARGFX	REV__ENSG00000186103|ENST00000334384|ARGFX	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2652587890625	3	438.257626	1311.75105	-1.1023	-0.00048311	3.1201	0.0013674	2.0178	0.00088432	438.25928198419734	29.189	0.56355	29.16	28.736	29.3	-0.029207					18	12	2	0	0	0	0.17567	1	1810	1810		24.276	10.768	1	63500	+		4706	22822	3216	3219	5265	5265					0.10764404551719053
DLRREEGF	8	Unmodified	_DLRREEGF_					0	0	0			REV__nc|ENSG00000215193|Q7Z412-2|PEX26	REV__nc|ENSG00000215193|Q7Z412-2|PEX26	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.80865478515625	2	511.256705	1020.49886	-0.67683	-0.00034603	-2.6632	-0.0013616	-3.34	-0.0017076	511.2549583747209	59.675	0.52779	60.066	59.727	60.254	0.39077					22	12	3	0	0	0	0.4196	1	6267	6267		31.955	2.8053	1	154210	+		4707	23678	3217	3220	5266	5266					-0.010571887389914991
DLRTTPETT	9	Unmodified	_DLRTTPETT_					0	0	0		nc|ENSG00000116690|Q92954-5|PRG4;nc|ENSG00000116690|Q92954-4|PRG4;nc|ENSG00000116690|Q92954-3|PRG4;nc|ENSG00000116690|Q92954-6|PRG4;nc|ENSG00000116690|Q92954-2|PRG4;ENSG00000116690|ENST00000445192|PRG4	nc|ENSG00000116690|Q92954-5|PRG4	nc|ENSG00000116690|Q92954-5|PRG4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3023071289062	2	517.261653	1032.50875	0.54038	0.00027952	3.2643	0.0016885	3.8046	0.001968	517.2631955415875	57.066	0.84631	57.621	57.27	58.116	0.55512					43	20	3	0	0	0	0.20789	1	5907	5907		34.173	3.6689	1	1185900			4708	2934	3218	3221	5267	5267					-0.006200455242833414
DLRVEEPTSE	10	Unmodified	_DLRVEEPTSE_					0	0	0			REV__ENSG00000187021|ENST00000358834|PNLIPRP1	REV__ENSG00000187021|ENST00000358834|PNLIPRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	587.779296875	2	587.78295	1173.55135	-2.076	-0.0012202	-3.0184	-0.0017741	-5.0943	-0.0029943	587.7813286876826	63.678	0.45704	63.705	63.453	63.91	0.027138					30	16	2	0	0	0	0.60985	1	5984	5984		49.536	5.4192	1	147640	+		4709	22896	3219	3222	5268	5268					-0.028486951866852905
DLSDLGVIL	9	Unmodified	_DLSDLGVIL_					0	0	0		nc|ENSG00000144045|Q8TE96-2|DQX1;ENSG00000144045|ENST00000404568|DQX1	nc|ENSG00000144045|Q8TE96-2|DQX1	nc|ENSG00000144045|Q8TE96-2|DQX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.76715087890625	2	472.768583	943.522613	-1.568	-0.00074129	-1.2854	-0.00060769	-2.8534	-0.001349	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.72402	1	8213	8213		38.806	1.647	1	404330			4710	4685	3220	3223	5269	5269					0.04859231974819522
DLSGRQYV	8	Unmodified	_DLSGRQYV_					0	0	0		ENSG00000023171|ENST00000635736|GRAMD1B;nc|ENSG00000023171|Q3KR37-3|GRAMD1B;nc|ENSG00000023171|Q3KR37-2|GRAMD1B;nc|ENSG00000023171|Q3KR37|GRAMD1B;nc|ENSG00000023171|Q3KR37-4|GRAMD1B;ENST00000532581.5_1_11:123431173-123490076:+|nuORF	ENSG00000023171|ENST00000635736|GRAMD1B	ENSG00000023171|ENST00000635736|GRAMD1B	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.244140625	2	469.240524	936.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.3	1	71.434	70.934	71.934	0.13356								0	0	0	0.29245	1	6485	6485		30.504	5.0535	1				4711	854	3221	3224	5270	5270					-0.004279761419979877
DLSLFDSVQP	10	Unmodified	_DLSLFDSVQP_					0	0	0			REV__ENST00000457668.1_1_2:60578942-60579098:-|nuORF	REV__ENST00000457668.1_1_2:60578942-60579098:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.7778930664062	2	560.779679	1119.5448	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.875	1	31.869	31.369	32.369	-0.0061455								0	0	0	0.45132	1	1772	1772		30.318	2.4355	1		+		4712	26972	3222	3225	5271	5271					-0.010185883474150614
DLSLGGVLLF	10	Unmodified	_DLSLGGVLLF_					0	0	0		nc|ENSG00000131778|Q86WJ1-5|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L;nc|ENSG00000131778|Q86WJ1-2|CHD1L;ENSG00000131778|ENST00000369258|CHD1L	nc|ENSG00000131778|Q86WJ1-5|CHD1L	nc|ENSG00000131778|Q86WJ1-5|CHD1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.2506713867188	2	517.30005	1032.58555	1.0186	0.00052694	-3.556	-0.0018395	-2.5374	-0.0013126	517.2980467925505	33.992	0.53895	34.202	33.983	34.522	0.21003					21	12	3	0	0	0	0.37624	1	2459	2459		45.952	0	1	113850			4713	3746	3223	3226	5272	5272					0.07055797762859584
DLSLLILQKLP	11	Unmodified	_DLSLLILQKLP_					0	0	0			REV__ENSG00000162621|ENST00000294635|LRRC53	REV__ENSG00000162621|ENST00000294635|LRRC53	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.8936767578125	2	626.897389	1251.78022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.64	1	109.72	109.22	110.22	0.078552								0	0	0	0.56276	1	11777	11777		19.997	7.1851	1		+		4714	20829	3224	3227	5273	5273					0.16440548848004255
DLSLLQIQMR	10	Unmodified	_DLSLLQIQMR_					0	0	0		nc|ENSG00000172766|Q6N069-5|NAA16;ENST00000476980.5_1_13:41885589-41929305:+|nuORF;nc|ENSG00000172766|Q6N069-4|NAA16;nc|ENSG00000172766|Q6N069-3|NAA16;nc|ENSG00000164134|Q9BXJ9-4|NAA15;nc|ENSG00000172766|Q6N069-2|NAA16;ENSG00000172766|ENST00000379406|NAA16;ENSG00000164134|ENST00000296543|NAA15	nc|ENSG00000172766|Q6N069-5|NAA16	nc|ENSG00000172766|Q6N069-5|NAA16	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24639892578125	3	406.228791	1215.66454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.689	1	15.606	15.106	16.106	-0.083363								0	0	0	0.45132	1	67	67		20.03	0.7678	1				4715	5924	3225	3228	5274	5274					0.06533701725470564
DLSLTPKT	8	Unmodified	_DLSLTPKT_					0	0	0		nc|ENSG00000111731|Q86YS7|C2CD5;ENSG00000111731|ENST00000446597|C2CD5	nc|ENSG00000111731|Q86YS7|C2CD5	nc|ENSG00000111731|Q86YS7|C2CD5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7715759277344	2	437.74765	873.480748	1.7037	0.00074579	3.4055	0.0014907	5.1092	0.0022365	437.7492996476214	36.556	0.4111	36.996	36.745	37.156	0.44043					10	9	2	0	0	0	0.4196	1	2863	2863		31.955	8.9124	1	35919			4716	2609	3226	3229	5275	5275					0.03894676286279264
DLSRMSQLVEV	11	Unmodified	_DLSRMSQLVEV_					0	0	0			REV__ENSG00000185634|ENST00000332408|SHC4	REV__ENSG00000185634|ENST00000332408|SHC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	638.834716796875	2	638.83192	1275.64929	1.5107	0.00096509	4.399	0.0028102	5.9097	0.0037753	638.8343540273713	74.714	0.84661	74.841	74.555	75.402	0.1271					66	22	4	0	0	0	0.43522	1	6940	6940		56.632	0.19845	1	652180	+		4717	22782	3227	3230	5276	5276					0.022487901376052832
DLSVLVEQ	8	Unmodified	_DLSVLVEQ_					0	0	0			REV__ENSG00000152467|ENST00000282326|ZSCAN1	REV__ENSG00000152467|ENST00000282326|ZSCAN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7430725097656	2	451.745108	901.475663	0.00016611	7.5038E-08	0.28443	0.00012849	0.2846	0.00012857	451.7450667794695	33.328	0.79413	33.331	32.989	33.783	0.0030785					41	18	3	0	0	0	0.88601	1	1968	1968		34.173	0	1	260270	+		4718	20301	3228	3231	5277	5277					0.020983724236884882
DLVFSGMPQGE	11	Oxidation (M)	_DLVFSGM(Oxidation (M))PQGE_		DLVFSGM(1)PQGE		DLVFSGM(45)PQGE	0	0	1			REV__ENST00000560702.1_1_15:37184376-37188970:-|nuORF	REV__ENST00000560702.1_1_15:37184376-37188970:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.9743041992188	2	598.268621	1194.52269	-0.68772	-0.00041144	-1.5967	-0.00095524	-2.2844	-0.0013667	598.7695095504597	69.726	0.33182	69.726	69.478	69.81	0					36	16	3	0	0	0	0.59499	1	6210	6210		45.022	6.2161	1	119760	+		4719	19118	3229	3232	5278	5278		281			-0.06679136087473125
DLVKPLLA	8	Unmodified	_DLVKPLLA_					0	0	0			REV__ENST00000261739.8_1_12:110477068-110477323:+|nuORF	REV__ENST00000261739.8_1_12:110477068-110477323:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7796936035156	2	434.778754	867.542954	-1.8344	-0.00079754	4.3253	0.0018805	2.4909	0.001083	434.7805085345101	43.07	1.706	43.07	42.535	44.241	0					126	41	4	0	0	0	0.86288	1	3094	3094		26.796	0	1	2514600	+		4720	24402	3230	3233	5279	5279					0.10388447425282266
DLVLILIQ	8	Unmodified	_DLVLILIQ_					0	0	0			REV__ENSG00000113248|ENST00000231173|PCDHB15	REV__ENSG00000113248|ENST00000231173|PCDHB15	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8009033203125	2	463.799686	925.584819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.032	1	46.003	45.503	46.503	-0.028782								0	0	0	0.29245	1	3760	3760		30.504	0	1		+		4721	17985	3231	3234	5280	5280					0.11905003113804469
DLVLLRVRSH	10	Unmodified	_DLVLLRVRSH_					0	0	0			REV__ENSG00000196090|ENST00000373187|PTPRT	REV__ENSG00000196090|ENST00000373187|PTPRT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.36669921875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.8545	1	12362	12362		36.447	9.7538	1	3346600	+		4722	23087	3232	3235	5281	5281					0.12459876308275852
DLVLTVLIA	9	Unmodified	_DLVLTVLIA_					0	0	0		ENST00000588439.1_1_19:36395473-36398510:-|nuORF;nc|ENSG00000011600|O43914-3|TYROBP;nc|ENSG00000011600|O43914-2|TYROBP;ENSG00000011600|ENST00000262629|TYROBP;ENST00000585626.1_1_19:36398336-36399184:-|nuORF	ENST00000588439.1_1_19:36395473-36398510:-|nuORF	ENST00000588439.1_1_19:36395473-36398510:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8050842285156	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.78058	1	2365	2365		30.504	2.2494	1	336090			4723	795	3233	3236	5282	5282					0.11580985768227947
DLVLVRTYDM	10	Unmodified	_DLVLVRTYDM_					0	0	0			REV__ENSG00000108846|ENST00000285238|ABCC3	REV__ENSG00000108846|ENST00000285238|ABCC3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.879150390625	2	612.818281	1223.62201	-1.2476	-0.00076457	-0.40281	-0.00024685	-1.6504	-0.0010114	612.81821222112	104.42	0.23159	104.51	104.44	104.67	0.093857					14	5	3	0	0	0	0.37624	1	11013	11013		65.465	0	1	211590	+		4724	17737	3234	3237	5283	5283					0.01914306597268478
DLVLVRTYDM	10	Unmodified	_DLVLVRTYDM_					0	0	0			REV__ENSG00000108846|ENST00000285238|ABCC3	REV__ENSG00000108846|ENST00000285238|ABCC3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.8795776367188	2	612.818281	1223.62201	-1.2477	-0.00076462	-2.952	-0.0018091	-4.1997	-0.0025737	612.8144012159489	104.63	0.31962	104.73	104.67	104.99	0.093857					9	7	2	0	0	0	0.37624	1	11049	11049		65.465	0	1	87825	+		4725	17737	3234	3237	5284	5284					0.01914306597268478
DLVMMEATLD	10	Unmodified	_DLVMMEATLD_					0	0	0		ENST00000599047.1_1_19:42334540-42334855:+|nuORF	ENST00000599047.1_1_19:42334540-42334855:+|nuORF	ENST00000599047.1_1_19:42334540-42334855:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.759765625	2	569.26195	1136.50935	-0.078089	-4.4453E-05	-1.7784	-0.0010124	-1.8565	-0.0010568	569.2617381424325	43.014	0.88065	43.014	42.577	43.458	0.00016785					56	20	4	0	0	0	0.46422	1	3269	3269		58.782	12.83	1	331900			4726	14369	3235	3238	5285	5285					-0.05344710191093327
DLVQERTFWRA	11	Unmodified	_DLVQERTFWRA_					0	0	0			REV__nc|ENSG00000112874|Q9BQG2-2|NUDT12	REV__nc|ENSG00000112874|Q9BQG2-2|NUDT12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.25201416015625	3	474.249242	1419.7259	-0.26251	-0.00012449	-2.1197	-0.0010053	-2.3822	-0.0011298	474.24833494801027	28.135	0.56339	28.095	27.831	28.394	-0.039906					18	11	2	0	0	0	0.74022	1	1391	1391		24.232	0.85391	1	65290	+		4727	17969	3236	3239	5286	5286					0.032823497491108355
DLVSILITVF	10	Unmodified	_DLVSILITVF_					0	0	0			REV__ENST00000343526.8_1_7:138269713-138269824:+|nuORF	REV__ENST00000343526.8_1_7:138269713-138269824:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3399658203125	2	560.336633	1118.65871	3.1377	0.0017581	3.0866	0.0017295	6.2243	0.0034877	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.85934	3	11416	11211;11416;11477		35.618	8.9254	1	83033000	+		4728	25293	3237	3240	5287;5288;5289	5288					0.1041292648549188
DLVSKLLI	8	Unmodified	_DLVSKLLI_					0	0	0			REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2742919921875	2	450.791861	899.569169	1.2989	0.00058551	-0.66481	-0.00029969	0.63405	0.00028582	450.7921621855095	93.133	0.82411	93.178	92.711	93.535	0.045448					27	19	2	0	0	0	0.4196	1	9713	9713		25.45	0	1	144920	+		4729	18928	3238	3241	5290	5290					0.11536716596765473
DLVSWVLI	8	Unmodified	_DLVSWVLI_					0	0	0			REV__ENST00000438489.6_1_19:16849058-16926137:+|nuORF	REV__ENST00000438489.6_1_19:16849058-16926137:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28759765625	2	472.776211	943.537869	-0.91198	-0.00043116	-0.50969	-0.00024097	-1.4217	-0.00067213	472.77656935499664	94.976	0.48782	95.207	94.9	95.388	0.23103					18	11	2	0	0	0	0.4196	1	9700	9700		20.482	13.288	1	128430	+		4730	26723	3239	3242	5291	5291					0.06384143562661393
DLVTALIVL	9	Unmodified	_DLVTALIVL_					0	0	0		ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8055114746094	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.78536	1	2831	2831		29.15	4.9468	1	371600			4731	1670	3240	3243	5292	5292					0.11580985768239316
DLVTKRQK	8	Unmodified	_DLVTKRQK_					0	0	0			REV__ENST00000284154.9_1_17:18950268-18950400:-|nuORF	REV__ENST00000284154.9_1_17:18950268-18950400:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3017272949219	2	494.300916	986.587279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.737	1	15.654	15.154	16.154	-0.083363								0	0	0	0.29245	1	73	73		30.504	0	1		+		4732	24622	3241	3244	5293	5293					0.09344851571472645
DLVVEQAH	8	Unmodified	_DLVVEQAH_					0	0	0			REV__ENSG00000080608|ENST00000397885|PUM3	REV__ENSG00000080608|ENST00000397885|PUM3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.7362060546875	2	455.735074	909.455596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.19	1	32.184	31.684	32.684	-0.0061455								0	0	0	0.30811	1	1812	1812		45.952	8.7928	1		+		4733	16808	3242	3245	5294	5294					-0.0027537851627812415
DLVVILKIL	9	Unmodified	_DLVVILKIL_					0	0	0		ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3504028320312	2	513.352086	1024.68962	-0.1171	-6.0112E-05	-2.5819	-0.0013254	-2.699	-0.0013856	513.3505527624555	55.868	0.97111	55.841	55.17	56.141	-0.027279					45	26	2	0	0	0	0.7932	1	5124	5124		18.324	1.8513	1	81557			4734	4651	3243	3246	5295	5295					0.17826124590374093
DLWGQGMTESD	11	Unmodified	_DLWGQGMTESD_					0	0	0			REV__ENST00000441769.3_1_9:21967254-21967470:+|nuORF	REV__ENST00000441769.3_1_9:21967254-21967470:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8695068359375	2	619.753335	1237.49212	-0.30826	-0.00019104	-2.6436	-0.0016384	-2.9519	-0.0018294	619.7516395808391	93.925	0.64251	93.994	93.624	94.266	0.069603					37	14	3	0	0	0	0.17574	1	9803	9803		33.922	0	1	347080	+		4735	26760	3244	3247	5296	5296					-0.11712914472536795
DLWLHWVVHWR	11	Unmodified	_DLWLHWVVHWR_					0	0	0			REV__ENST00000538886.5_1_17:73233291-73233537:-|nuORF	REV__ENST00000538886.5_1_17:73233291-73233537:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3137817382812	3	516.273722	1545.79934	-0.047402	-2.4472E-05	4.3043	0.0022222	4.2569	0.0021977	516.2752676970292	99.733	0.25089	99.774	99.629	99.88	0.041107					7	5	2	0	0	0	0.18131	1	10605	10605		8.7993	0	1	57898	+		4736	28441	3245	3248	5297	5297					0.04826942982253968
DLWNIGISVF	10	Unmodified	_DLWNIGISVF_					0	0	0		ENST00000507507.1_1_10:63170082-63173364:-|nuORF;ENSG00000196932|ENST00000399298|TMEM26	ENST00000507507.1_1_10:63170082-63173364:-|nuORF	ENST00000507507.1_1_10:63170082-63173364:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3538208007812	2	582.308406	1162.60226	0.71795	0.00041807	-2.5097	-0.0014614	-1.7917	-0.0010433	582.3068270951094	103.63	0.16081	103.82	103.74	103.9	0.18297					6	3	2	0	0	0	0.37624	1	10968	10968		39.253	0	1	95912			4737	8115	3246	3249	5298	5298					0.02746298648821721
DLWQKKKVM	9	Oxidation (M)	_DLWQKKKVM(Oxidation (M))_		DLWQKKKVM(1)		DLWQKKKVM(48)	0	0	1			REV__L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|24|3|sense	REV__L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|24|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.3325805664062	2	596.331359	1190.64816	2.639	0.0015737	-0.18675	-0.00011137	2.4522	0.0014623	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.58668	1	10422	10422		47.657	6.5773	1	1305600	+		4738	29541	3247	3250	5299	5299		429			0.06046620559368421
DLYHTKRS	8	Unmodified	_DLYHTKRS_					0	0	0		ENSG00000261739|ENST00000562295|GOLGA8S;nc|ENSG00000181984|A6NN73|GOLGA8CP;ENSG00000153684|ENST00000526619|GOLGA8F;ENSG00000183629|ENST00000525590|GOLGA8G	ENSG00000261739|ENST00000562295|GOLGA8S	ENSG00000261739|ENST00000562295|GOLGA8S	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.27215576171875	2	510.267073	1018.51959	-0.84337	-0.00043035	3.6908	0.0018833	2.8474	0.0014529	510.26866493988206	57.351	0.39321	57.745	57.574	57.967	0.39407					13	9	2	0	0	0	0.4196	1	5947	5947		35.618	2.8059	1	241340			4739	8928	3248	3251	5300	5300					0.011074016406610099
DLYLNELSEI	10	Unmodified	_DLYLNELSEI_					0	0	0			REV__ENSG00000128915|ENST00000261520|ICE2	REV__ENSG00000128915|ENST00000261520|ICE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8055419921875	2	604.805894	1207.59723	-0.029454	-1.7814E-05	0.35966	0.00021752	0.33021	0.00019971	604.8059425597291	78.892	0.76372	79.441	79.107	79.871	0.54945					43	17	4	0	0	0	0.14384	1	9048	9048		95.815	8.1187	1	656990	+		4740	18799	3249	3252	5301	5301					0.0017394999551925139
DLYYILKHSK	10	Unmodified	_DLYYILKHSK_					0	0	0		ENST00000508918.5_1_4:16504706-16675844:-|nuORF;nc|ENSG00000169744|O43679-2|LDB2;nc|ENSG00000169744|O43679-3|LDB2;ENSG00000169744|ENST00000304523|LDB2	ENST00000508918.5_1_4:16504706-16675844:-|nuORF	ENST00000508918.5_1_4:16504706-16675844:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3607788085938	2	640.355888	1278.69722	1.6035	0.0010268	3.0485	0.0019521	4.652	0.0029789	640.3577368030512	99.407	2.6879	99.454	98.409	101.1	0.047531					162	62	4	0	0	0	0.86348	1	10772	10772		31.53	1.2121	1	584870			4741	6520	3250	3253	5302	5302					0.0690223211997818
DMADNAFDDE	10	Unmodified	_DMADNAFDDE_					0	0	0		nc|ENSG00000156219|Q13508-2|ART3;ENST00000513494.5_1_4:76997042-77020397:+|nuORF;nc|ENSG00000156219|Q13508-3|ART3;ENSG00000156219|ENST00000355810|ART3	nc|ENSG00000156219|Q13508-2|ART3	nc|ENSG00000156219|Q13508-2|ART3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.7011108398438	2	571.700768	1141.38698	-0.81187	-0.00046415	4.2777	0.0024456	3.4659	0.0019814	571.70322581514	31.227	0.38118	31.246	31.121	31.502	0.01836					13	8	3	0	0	0	0.8505	1	1678	1678		19.104	1.7386	1	20738			4742	5368	3251	3254	5303	5303					-0.17805455668963077
DMDDDMDS	8	Unmodified	_DMDDDMDS_					0	0	0			REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2874450683594	2	472.136415	942.258277	1.9996	0.00094408	0.33354	0.00015748	2.3331	0.0011016	472.13770318343717	95.291	0.24252	95.233	95.145	95.387	-0.057526					6	5	2	0	0	0	0.4196	1	10180	10180		20.482	6.7065	1	50695	+		4743	30095	3252	3255	5304	5304					-0.2151613390356033
DMDDSGDEMG	10	Unmodified	_DMDDSGDEMG_					0	0	0			REV__nc|ENSG00000115464|Q70CQ2-3|USP34	REV__nc|ENSG00000115464|Q70CQ2-3|USP34	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1661376953125	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.685	1	24.744	24.244	25.244	0.058167								0	0	0	0.45132	1	867	867		9.7057	0.88332	1		+		4744	18123	3253	3256	5305	5305					-0.21549077329086685
DMDDSGDEMG	10	Unmodified	_DMDDSGDEMG_					0	0	0			REV__nc|ENSG00000115464|Q70CQ2-3|USP34	REV__nc|ENSG00000115464|Q70CQ2-3|USP34	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.165283203125	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.526	1	76.615	76.115	77.115	0.089363								0	0	0	0.45132	1	7132	7132		20.947	1.8434	1		+		4745	18123	3253	3256	5306	5306					-0.21549077329086685
DMEAIPVKQFV	11	Unmodified	_DMEAIPVKQFV_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF;ENST00000468576.1_1_3:62229532-62248574:+|nuORF	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	638.8345947265625	2	638.833931	1275.65331	0.70348	0.0004494	1.9691	0.0012579	2.6725	0.0017073	638.8348170860995	74.695	1.1442	74.827	74.537	75.682	0.13208					77	32	4	0	0	0	0.53361	1	6952	6952		49.536	1.5765	1	682170			4746	4728	3254	3257	5307	5307					0.0265087963134647
DMEAIPVKQFV	11	Unmodified	_DMEAIPVKQFV_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF;ENST00000468576.1_1_3:62229532-62248574:+|nuORF	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	639.334716796875	2	638.833931	1275.65331	-0.69863	-0.00044631	3.3587	0.0021457	2.6601	0.0016994	638.835717832915	74.828	1.0238	74.914	74.628	75.651	0.085907					67	27	4	0	0	0	0.32928	1	6940	6940		67.494	3.9598	1	647960			4747	4728	3254	3257	5308	5308					0.0265087963134647
DMENMSDDD	9	Unmodified	_DMENMSDDD_					0	0	0		nc|ENSG00000065150|O00410-2|IPO5;ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-3|IPO5	nc|ENSG00000065150|O00410-2|IPO5	nc|ENSG00000065150|O00410-2|IPO5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.1639404296875	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.565	1	21.647	21.147	22.147	0.081615								0	0	0	0.32469	1	610	610		21.96	5.4867	1				4748	1121	3255	3258	5309	5309					-0.21549077329086685
DMENMSDDD	9	Unmodified	_DMENMSDDD_					0	0	0		nc|ENSG00000065150|O00410-2|IPO5;ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-3|IPO5	nc|ENSG00000065150|O00410-2|IPO5	nc|ENSG00000065150|O00410-2|IPO5	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.16455078125	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.364	1	22.355	21.855	22.855	-0.0088215								0	0	0	0.36247	1	656	656		10.866	1.1599	1				4749	1121	3255	3258	5310	5310					-0.21549077329086685
DMENMSDDD	9	Unmodified	_DMENMSDDD_					0	0	0		nc|ENSG00000065150|O00410-2|IPO5;ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-3|IPO5	nc|ENSG00000065150|O00410-2|IPO5	nc|ENSG00000065150|O00410-2|IPO5	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.1649780273438	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.681	1	22.672	22.172	23.172	-0.0088215								0	0	0	0.34348	1	680	680		16.473	0	1				4750	1121	3255	3258	5311	5311					-0.21549077329086685
DMEWFFKWLRK	11	Unmodified	_DMEWFFKWLRK_					0	0	0			REV__nc|ENSG00000070182|P11277-3|SPTB	REV__nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.6077270507812	3	529.27099	1584.79114	-0.036706	-1.9428E-05	4.1509	0.002197	4.1142	0.0021775	529.2730968301188	71.514	1.1317	71.548	71.148	72.279	0.034004					161	46	5	0	0	0	0.75121	1	6769	6769		21.78	3.9473	1	1262700	+		4751	16597	3256	3259	5312	5312					0.02213627950618502
DMEWFFKWLRK	11	Unmodified	_DMEWFFKWLRK_					0	0	0			REV__nc|ENSG00000070182|P11277-3|SPTB	REV__nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.2720336914062	3	529.27099	1584.79114	-0.03642	-1.9276E-05	3.8755	0.0020512	3.8391	0.0020319	529.6073842966563	75.93	0.75759	75.979	75.606	76.364	0.049194					66	21	4	0	0	0	0.80813	1	7314	7314		9.6461	2.9865	1	322850	+		4752	16597	3256	3259	5313	5313					0.02213627950618502
DMEWFFKWLRK	11	Unmodified	_DMEWFFKWLRK_					0	0	0			REV__nc|ENSG00000070182|P11277-3|SPTB	REV__nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.6078491210938	3	529.27099	1584.79114	0.2965	0.00015693	3.6501	0.0019319	3.9466	0.0020888	529.272782493992	75.879	0.9494	75.833	75.455	76.404	-0.045975					62	25	3	0	0	0	0.77803	2	7516	7491;7516		15.921	7.1871	1	371590	+		4753	16597	3256	3259	5314;5315	5315					0.02213627950618502
DMEWFFKWLRK	11	Unmodified	_DMEWFFKWLRK_					0	0	0			REV__nc|ENSG00000070182|P11277-3|SPTB	REV__nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.2720947265625	3	529.27099	1584.79114	0.60484	0.00032013	3.3137	0.0017538	3.9185	0.002074	529.2726734817443	75.667	0.94073	75.8	75.355	76.295	0.13325					87	26	5	0	0	0	0.78683	2	7010	7010;7068		14.086	4.8742	1	827280	+		4754	16597	3256	3259	5316;5317	5316					0.02213627950618502
DMFLAVMRF	9	Unmodified	_DMFLAVMRF_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A;nc|ENSG00000091536|Q9UKN7-2|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.3084716796875	2	565.28028	1128.54601	0.18412	0.00010408	1.7876	0.0010105	1.9717	0.0011145	565.2812321141677	75.373	0.462	75.768	75.532	75.994	0.39507					17	10	2	0	0	0	0.20789	1	8493	8493		27.882	0	1	90743			4755	1679	3257	3260	5318	5318					-0.013123687838742626
DMHFSSLGCI	10	Unmodified	_DMHFSSLGCI_					0	0	0		nc|ENSG00000003402|O15519-7|CFLAR;nc|ENSG00000003402|O15519-3|CFLAR;nc|ENSG00000003402|O15519-11|CFLAR	nc|ENSG00000003402|O15519-7|CFLAR	nc|ENSG00000003402|O15519-7|CFLAR	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.957275390625	2	555.241352	1108.46815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.591	1	63.591	63.091	64.091	0								0	0	0	0.45132	1	5579	5579		42.396	5.9494	1				4756	14729	3258	3261	5319	5319					-0.08174426439904892
DMIAEKLAPS	10	Unmodified	_DMIAEKLAPS_					0	0	0		nc|ENSG00000186496|Q96N95-2|ZNF396;nc|ENSG00000186496|Q96N95-3|ZNF396;ENSG00000186496|ENST00000589332|ZNF396	nc|ENSG00000186496|Q96N95-2|ZNF396	nc|ENSG00000186496|Q96N95-2|ZNF396	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.31396484375	2	537.778625	1073.5427	-0.3953	-0.00021258	1.5205	0.00081769	1.1252	0.0006051	537.7788584409222	49.422	0.24573	49.882	49.707	49.952	0.45983					9	5	2	0	0	0	0.37624	1	4821	4821		30.318	0	1	103160			4757	7799	3259	3262	5320	5320					0.008866596431062135
DMKFSESE	8	Unmodified	_DMKFSESE_					0	0	0			REV__ENST00000489043.1_1_3:184082752-184082845:+|nuORF	REV__ENST00000489043.1_1_3:184082752-184082845:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.266845703125	2	486.702583	971.390612	-0.099819	-4.8582E-05	-3.8762	-0.0018866	-3.976	-0.0019352	486.7007116028445	85.694	0.66634	86.137	85.824	86.49	0.44331					26	15	2	0	0	0	0.4196	1	9980	9980		18.324	0	1	175110	+		4758	20990	3260	3263	5321	5321					-0.09622741104442412
DMKKFEAEL	9	Unmodified	_DMKKFEAEL_					0	0	0		ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-2|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;nc|ENSG00000131018|Q8NF91-8|SYNE1	ENSG00000131018|ENST00000367255|SYNE1	ENSG00000131018|ENST00000367255|SYNE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.77734375	2	555.778625	1109.5427	-0.16725	-9.2954E-05	-2.8883	-0.0016052	-3.0555	-0.0016982	555.776990924581	78.04	1.0719	78.604	78.007	79.079	0.56332					56	25	4	0	0	0	0.44421	1	8905	8905		54.776	1.8396	1	858780			4759	3707	3261	3264	5322	5322					-0.007693403568737267
DMKKLKARM	9	Unmodified	_DMKKLKARM_					0	0	0		ENST00000532247.5_1_16:3115647-3117689:+|nuORF;ENST00000532086.1_1_16:3115767-3117689:+|nuORF;ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001-7|IL32	ENST00000532247.5_1_16:3115647-3117689:+|nuORF;ENSG00000008517|ENST00000525643|IL32	ENSG00000008517|ENST00000525643|IL32	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.8201293945312	2	560.820104	1119.62565	0.78776	0.00044179	-1.3165	-0.00073831	-0.52872	-0.00029652	560.8192753742564	92.439	2.8901	92.598	91.192	94.082	0.15874					209	68	4	0	0	0	0.77696	1	9323	9323		31.53	2.3803	1	872010			4760	749;13372	3262	3265	5323	5323					0.07062697890137315
DMNRLIWDFWE	11	Unmodified	_DMNRLIWDFWE_					0	0	0			REV__nc|ENSG00000166548|O00142-5|TK2	REV__nc|ENSG00000166548|O00142-5|TK2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.8961181640625	3	508.902855	1523.68673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.32	1	114.32	113.82	114.82	0								0	0	0	0.56276	1	11791	11791		6.001	2.382	1		+		4761	21304	3263	3266	5324	5324					-0.054161185967359415
DMPAKIIQYY	10	Unmodified	_DMPAKIIQYY_					0	0	0			REV__nc|ENSG00000099954|Q9BXF3-2|CECR2	REV__nc|ENSG00000099954|Q9BXF3-2|CECR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3145141601562	2	621.315374	1240.6162	-0.48747	-0.00030287	-2.2051	-0.0013701	-2.6926	-0.001673	621.3138017387486	68.778	0.94327	68.741	68.457	69.4	-0.036301					71	37	3	0	0	0	0.6116	3	6676	6621;6631;6676		49.442	5.3247	1	439870	+		4762	29736	3264	3267	5325;5326;5327	5327					0.005512080856078683
DMPDLNDCVS	10	Unmodified	_DMPDLNDCVS_					0	0	0		ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.718017578125	2	554.717907	1107.42126	0.2226	0.00012348	0.5844	0.00032418	0.807	0.00044765	554.7181138197201	24.832	0.79422	24.786	24.312	25.107	-0.04598					37	17	3	0	0	0	0.86471	1	983	983		30.318	3.5216	1	73033			4763	4077	3265	3268	5328	5328					-0.12815330781722878
DMPDYTVF	8	Unmodified	_DMPDYTVF_					0	0	0			REV__ENST00000487440.5_1_3:47281337-47324087:-|nuORF	REV__ENST00000487440.5_1_3:47281337-47324087:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.30084228515625	2	494.210043	986.405534	-0.075006	-3.7069E-05	0.6004	0.00029672	0.52539	0.00025965	494.2114026817987	97.739	0.16495	97.796	97.715	97.88	0.056839					5	3	2	0	0	0	0.4196	1	10305	10305		37.028	1.4102	1	23289	+		4764	16944	3266	3269	5329	5329					-0.08821249236450512
DMPNVIVKYY	10	Unmodified	_DMPNVIVKYY_					0	0	0			REV__nc|ENSG00000147133|P21675-25|TAF1	REV__nc|ENSG00000147133|P21675-25|TAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3137817382812	2	621.315374	1240.6162	-0.2911	-0.00018087	-2.2058	-0.0013705	-2.4969	-0.0015514	621.3138090299801	68.828	0.73877	68.854	68.562	69.301	0.02636					77	31	4	0	0	0	0.64457	1	6513	6513		47.657	8.4045	1	456890	+		4765	20054	3267	3270	5330	5330					0.005512080856078683
DMPNVIVKYY	10	Unmodified	_DMPNVIVKYY_					0	0	0			REV__nc|ENSG00000147133|P21675-25|TAF1	REV__nc|ENSG00000147133|P21675-25|TAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3143310546875	2	621.315374	1240.6162	-0.62331	-0.00038727	-1.8996	-0.0011802	-2.5229	-0.0015675	621.3140085474115	68.614	0.80863	68.647	68.364	69.173	0.033005					72	32	3	0	0	0	0.344	1	6564	6564		68.787	1.2932	1	488350	+		4766	20054	3267	3270	5331	5331					0.005512080856078683
DMPNVIVKYY	10	Unmodified	_DMPNVIVKYY_					0	0	0			REV__nc|ENSG00000147133|P21675-25|TAF1	REV__nc|ENSG00000147133|P21675-25|TAF1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	621.315374	1240.6162	-0.62331	-0.00038727	-1.8996	-0.0011802	-2.5229	-0.0015675	621.3140085474115	68.614	0.80863	68.647	68.364	69.173	0.033005	-0.1255	0.00047157	NaN	68.787	72	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	488350	+		4767	20054	3267	3270							0.005512080856078683
DMPNWAIRVL	10	Unmodified	_DMPNWAIRVL_					0	0	0			REV__ENSG00000206422|ENST00000383467|LRRC30	REV__ENSG00000206422|ENST00000383467|LRRC30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	607.82275390625	2	607.821158	1213.62776	-0.44775	-0.00027215	1.7987	0.0010933	1.3509	0.00082113	607.8226477968577	58.739	0.43401	58.725	58.466	58.9	-0.013729					24	15	2	0	0	0	0.33399	1	5360	5360		69.628	6.0938	1	94081	+		4768	23588	3268	3271	5332	5332					0.029494498995973117
DMPNWAIRVL	10	Unmodified	_DMPNWAIRVL_					0	0	0			REV__ENSG00000206422|ENST00000383467|LRRC30	REV__ENSG00000206422|ENST00000383467|LRRC30	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	607.821158	1213.62776	-0.44775	-0.00027215	1.7987	0.0010933	1.3509	0.00082113	607.8226477968577	58.739	0.43401	58.725	58.466	58.9	-0.013729	0.093471	-0.0012573	NaN	69.628	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94081	+		4769	23588	3268	3271							0.029494498995973117
DMRILTIL	8	Unmodified	_DMRILTIL_					0	0	0			REV__ENSG00000172154|ENST00000302124|OR8I2	REV__ENSG00000172154|ENST00000302124|OR8I2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7906799316406	2	487.788795	973.563038	0.6235	0.00030414	2.5998	0.0012681	3.2233	0.0015723	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.87479	1	7832	7832		30.504	1.3541	1	479320	+		4770	21806	3269	3272	5333	5333					0.0751987509358969
DMSDDEMDN	9	Unmodified	_DMSDDEMDN_					0	0	0			REV__nc|ENSG00000005194|Q6FI81-3|CIAPIN1	REV__nc|ENSG00000005194|Q6FI81-3|CIAPIN1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.166748046875	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.81	1	110.8	110.3	111.3	-0.0074387								0	0	0	0.33394	1	11817	11817		19.104	1.7386	1		+		4771	16080	3270	3273	5334	5334					-0.21549077329086685
DMSNFDRFSEM	11	2 Oxidation (M)	_DM(Oxidation (M))SNFDRFSEM(Oxidation (M))_		DM(1)SNFDRFSEM(1)		DM(46)SNFDRFSEM(46)	0	0	2		nc|ENSG00000110958|Q15185-2|PTGES3;ENSG00000110958|ENST00000262033|PTGES3;ENST00000537473.2_1_12:57059942-57081218:-|nuORF	nc|ENSG00000110958|Q15185-2|PTGES3	nc|ENSG00000110958|Q15185-2|PTGES3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.84808349609375	3	470.848198	1409.52277	-0.26745	-0.00012593	-0.33356	-0.00015706	-0.60101	-0.00028299	470.8479679891761	48.972	0.52817	49.877	49.646	50.174	0.90424					35	12	4	0	0	0	0.58516	1	4786	4786		45.908	14.274	1	1654600			4772	2556	3271	3274	5335	5335		53;54			-0.1656150414980857
DMTRRGEERC	10	Oxidation (M)	_DM(Oxidation (M))TRRGEERC_		DM(1)TRRGEERC		DM(44)TRRGEERC	0	0	1			REV__ENST00000382357.3_1_21:34400138-34400483:+|nuORF	REV__ENST00000382357.3_1_21:34400138-34400483:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.77734375	2	634.777153	1267.53975	-0.0023067	-1.4642E-06	0.4855	0.00030818	0.48319	0.00030672	634.7774228738218	50.229	0.98591	50.226	49.624	50.609	-0.0030327					51	23	3	0	0	0	0.70553	1	4242	4242		44.377	6.5657	1	200210	+		4773	25977	3272	3275	5336	5336		402			-0.0833153875332755
DMVIGLPLTI	10	Unmodified	_DMVIGLPLTI_					0	0	0			REV__nc|ENSG00000167703|Q8N370-2|SLC43A2;REV__ENST00000575944.1_1_17:1519839-1531078:-|nuORF	REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	535.8140258789062	2	536.309561	1070.60457	1.2452	0.00066781	2.5184	0.0013506	3.7636	0.0020184	536.3111133217641	98.269	1.4811	98.318	97.579	99.06	0.048157					68	33	3	0	0	0	0.37624	1	10586	10586		19.997	0.6368	1	286330	+		4774	28940;28989	3273	3276	5337	5337					0.07209011062241188
DMVIGLPLTI	10	Unmodified	_DMVIGLPLTI_					0	0	0			REV__nc|ENSG00000167703|Q8N370-2|SLC43A2;REV__ENST00000575944.1_1_17:1519839-1531078:-|nuORF	REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	536.309561	1070.60457	-0.59155	-0.00031725	4.2036	0.0022544	3.612	0.0019372	536.3120161464789	98.707	1.7951	98.707	97.552	99.348	0	0.23804	0.00096281	NaN	19.997	73	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	229960	+		4775	28940;28989	3273	3276							0.07209011062241188
DMVIGLPLTI	10	Unmodified	_DMVIGLPLTI_					0	0	0			REV__nc|ENSG00000167703|Q8N370-2|SLC43A2;REV__ENST00000575944.1_1_17:1519839-1531078:-|nuORF	REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	536.309561	1070.60457	-0.10216	-5.4787E-05	3.7665	0.00202	3.6643	0.0019652	536.311697249244	98.503	2.0329	98.553	97.2	99.233	0.04982	0.083705	0.00049397	NaN	19.997	84	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	313970	+		4776	28940;28989	3273	3276							0.07209011062241188
DMVIGLPLTI	10	Unmodified	_DMVIGLPLTI_					0	0	0			REV__nc|ENSG00000167703|Q8N370-2|SLC43A2;REV__ENST00000575944.1_1_17:1519839-1531078:-|nuORF	REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	536.309561	1070.60457	3.0623	0.0016424	0.39702	0.00021293	3.4594	0.0018553	536.3100413086446	98.472	1.6816	98.417	97.314	98.996	-0.054817	-0.052648	-0.0031202	NaN	19.997	72	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	269350	+		4777	28940;28989	3273	3276							0.07209011062241188
DMVIGLPLTI	10	Unmodified	_DMVIGLPLTI_					0	0	0			REV__nc|ENSG00000167703|Q8N370-2|SLC43A2;REV__ENST00000575944.1_1_17:1519839-1531078:-|nuORF	REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	536.309561	1070.60457	0.035418	1.8995E-05	3.3774	0.0018114	3.4129	0.0018304	536.3115374400554	98.142	1.5616	98.37	97.408	98.969	0.22787	-0.09955	7.669E-05	NaN	19.997	73	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	360500	+		4778	28940;28989	3273	3276							0.07209011062241188
DMVIGLPLTI	10	Unmodified	_DMVIGLPLTI_					0	0	0			REV__nc|ENSG00000167703|Q8N370-2|SLC43A2;REV__ENST00000575944.1_1_17:1519839-1531078:-|nuORF	REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	536.309561	1070.60457	1.4279	0.00076578	1.7224	0.00092374	3.1503	0.0016895	536.3103578466499	98.058	1.9642	98.443	97.076	99.04	0.38548	-0.026043	-0.0016985	NaN	19.997	65	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	340120	+		4779	28940;28989	3273	3276							0.07209011062241188
DMVIGLPLTI	10	Unmodified	_DMVIGLPLTI_					0	0	0			REV__nc|ENSG00000167703|Q8N370-2|SLC43A2;REV__ENST00000575944.1_1_17:1519839-1531078:-|nuORF	REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	536.309561	1070.60457	1.0355	0.00055537	2.7549	0.0014775	3.7904	0.0020328	536.3109999551893	98.165	1.2295	98.542	97.998	99.227	0.37679	0.072485	-0.00059107	NaN	19.997	50	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	364450	+		4780	28940;28989	3273	3276							0.07209011062241188
DMVKVKGQVS	10	Unmodified	_DMVKVKGQVS_					0	0	0		ENSG00000010292|ENST00000315579|NCAPD2;ENST00000535804.1_1_12:6637788-6638275:+|nuORF	ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3069458007812	2	545.799891	1089.58523	0.27314	0.00014908	-3.3863	-0.0018482	-3.1132	-0.0016992	545.7980089246931	57.632	0.70835	58.187	57.848	58.557	0.55512					36	17	3	0	0	0	0.37624	1	6070	6070		58.23	15.834	1	538300			4781	765	3274	3277	5338	5338					0.044020547713671476
DMVKVKGQVS	10	Unmodified	_DMVKVKGQVS_					0	0	0		ENSG00000010292|ENST00000315579|NCAPD2;ENST00000535804.1_1_12:6637788-6638275:+|nuORF	ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	545.799891	1089.58523	-1.7058	-0.00093101	-1.6518	-0.00090155	-3.3576	-0.0018326	545.7987103582665	57.691	0.53877	58.085	57.819	58.358	0.39408	-0.050877	0.0013937	NaN	56.434	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	491240			4782	765	3274	3277							0.044020547713671476
DMVLATDMSKH	11	Unmodified	_DMVLATDMSKH_					0	0	0		ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000285188|Q08493-2|PDE4C;nc|ENSG00000285188|Q08493|PDE4C;nc|ENSG00000065989|P27815-5|PDE4A;ENST00000590407.1_1_19:10569976-10577573:+|nuORF;nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;chr19:10417865-10446218|46|10.09|0.27|5.21|+|ENST00000592685|PDE4A,PDE4A;ENSG00000065989|ENST00000380702|PDE4A;ENST00000483863.2_1_1:66833392-66833766:+|nuORF;nc|ENSG00000184588|Q07343-4|PDE4B;nc|ENSG00000184588|Q07343-2|PDE4B;nc|ENSG00000184588|Q07343-3|PDE4B;ENSG00000184588|ENST00000341517|PDE4B	ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000184588|Q07343-4|PDE4B	ENSG00000105650|ENST00000262805|PDE4C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	624.2938842773438	2	624.291573	1246.56859	0.6414	0.00040042	1.9348	0.0012079	2.5762	0.0016083	624.292686131425	69.433	0.66615	69.562	69.21	69.876	0.1291					83	31	4	0	0	0	0.45992	1	6300	6300		54.722	3.1946	1	3312300			4783	2233;7626	3275	3278	5339	5339					-0.044828141769130525
DMVLTPGLVL	10	Unmodified	_DMVLTPGLVL_					0	0	0			REV__ENSG00000206150|ENST00000382951|RNASE13	REV__ENSG00000206150|ENST00000382951|RNASE13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.2998657226562	2	529.301736	1056.58892	0.13219	6.9967E-05	-3.0545	-0.0016168	-2.9223	-0.0015468	529.2996849049168	58.481	1.0948	59.034	58.597	59.692	0.55323					63	26	4	0	0	0	0.5766	1	6142	6142		51.335	14.176	1	1371900	+		4784	23586	3276	3279	5340	5340					0.06288724545220248
DMVLWKVVF	9	Unmodified	_DMVLWKVVF_					0	0	0		ENSG00000133657|ENST00000645319|ATP13A3	ENSG00000133657|ENST00000645319|ATP13A3	ENSG00000133657|ENST00000645319|ATP13A3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.853271484375	2	568.81227	1135.60999	-1.1652	-0.00066279	-1.273	-0.00072412	-2.4383	-0.0013869	569.3145361106031	102.48	0.60573	102.5	102.24	102.85	0.01989					21	14	2	0	0	0	0.20789	1	10999	10999		30.504	0	1	168110			4785	3887	3277	3280	5341	5341					0.04760734644719378
DNAHEAIVL	9	Unmodified	_DNAHEAIVL_					0	0	0			REV__ENST00000559075.5_1_15:76523658-76603729:-|nuORF	REV__ENST00000559075.5_1_15:76523658-76603729:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2533264160156	2	491.253631	980.49271	-1.382	-0.00067894	0.71889	0.00035316	-0.66316	-0.00032578	491.2541265661837	47.952	0.78971	48.422	48.082	48.871	0.46941					44	19	3	0	0	0	0.30689	2	4599	4587;4599		64.207	6.396	1	957090	+		4786	19608	3278	3281	5342;5343	5343					0.0016829302946916869
DNAHEAIVL	9	Unmodified	_DNAHEAIVL_					0	0	0			REV__ENST00000559075.5_1_15:76523658-76603729:-|nuORF	REV__ENST00000559075.5_1_15:76523658-76603729:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.25335693359375	2	491.253631	980.49271	-0.77477	-0.00038061	0.2665	0.00013092	-0.50828	-0.00024969	491.25385460040826	47.762	0.5917	48.685	48.429	49.021	0.92315					35	14	3	0	0	0	0.19818	2	4577	4577;4601		74.255	2.9593	1	1026700	+		4787	19608	3278	3281	5344;5345	5344					0.0016829302946916869
DNAHEAIVL	9	Unmodified	_DNAHEAIVL_					0	0	0			REV__ENST00000559075.5_1_15:76523658-76603729:-|nuORF	REV__ENST00000559075.5_1_15:76523658-76603729:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	491.253631	980.49271	-1.382	-0.00067894	0.71889	0.00035316	-0.66316	-0.00032578	491.2541265661837	47.952	0.78971	48.422	48.082	48.871	0.46941	-0.13175	0.00019129	NaN	74.255	44	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	957090	+		4788	19608	3278	3281							0.0016829302946916869
DNAHEAIVL	9	Unmodified	_DNAHEAIVL_					0	0	0			REV__ENST00000559075.5_1_15:76523658-76603729:-|nuORF	REV__ENST00000559075.5_1_15:76523658-76603729:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	491.253631	980.49271	-0.77477	-0.00038061	0.2665	0.00013092	-0.50828	-0.00024969	491.25385460040826	47.762	0.5917	48.685	48.429	49.021	0.92315	0.13175	-0.00025319	NaN	74.255	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1026700	+		4789	19608	3278	3281							0.0016829302946916869
DNAKLFCSD	9	Unmodified	_DNAKLFCSD_					0	0	0			REV__chr3:100160501-100166335|20|18.15|0.39|5.55|+|2|CMSS1,CMSS1|1	REV__chr3:100160501-100166335|20|18.15|0.39|5.55|+|2|CMSS1,CMSS1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.25244140625	2	506.723849	1011.43315	1.2844	0.00065086	-1.9513	-0.00098879	-0.66689	-0.00033793	506.7226871037278	49.128	0.40722	50.032	49.846	50.253	0.90424					15	9	2	0	0	0	0.20789	1	4808	4808		20.947	3.582	1	225380	+		4790	15791	3279	3282	5346	5346					-0.07211345976213579
DNAPALLVPRV	11	Unmodified	_DNAPALLVPRV_					0	0	0		nc|ENSG00000204965|Q9Y5H7-2|PCDHA5;nc|ENSG00000204965|Q9Y5H7-3|PCDHA5;ENSG00000204965|ENST00000529859|PCDHA5	nc|ENSG00000204965|Q9Y5H7-2|PCDHA5	nc|ENSG00000204965|Q9Y5H7-2|PCDHA5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.838134765625	2	582.840405	1163.66626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.76	1	15.68	15.18	16.18	-0.080017								0	0	0	0.56276	1	49	49		27.047	5.0874	1				4791	8504	3280	3283	5347	5347					0.09097078805734782
DNAPAVLH	8	Unmodified	_DNAPAVLH_					0	0	0		nc|ENSG00000240764|Q9Y5F6-2|PCDHGC5;ENSG00000240764|ENST00000252087|PCDHGC5	nc|ENSG00000240764|Q9Y5F6-2|PCDHGC5	nc|ENSG00000240764|Q9Y5F6-2|PCDHGC5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2972717285156	2	418.716685	835.418816	-0.28625	-0.00011986	-2.5988	-0.0010882	-2.8851	-0.001208	418.71563883682677	61.951	0.49071	62.34	61.957	62.447	0.38846					15	10	2	0	0	0	0.4196	1	6618	6618		33.516	0	1	76408			4792	8784	3281	3284	5348	5348					-0.005476303421914963
DNASGIYLN	9	Unmodified	_DNASGIYLN_					0	0	0			REV__ENSG00000169933|ENST00000675598|FRMPD4	REV__ENSG00000169933|ENST00000675598|FRMPD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7284851074219	2	483.729989	965.445425	-0.32675	-0.00015806	-2.37	-0.0011464	-2.6967	-0.0013045	483.72872071539695	73.085	0.99957	73.639	72.943	73.942	0.55386					71	26	4	0	0	0	0.39367	1	8182	8182		58.23	15.834	1	1309200	+		4793	21618	3282	3285	5349	5349					-0.038679862415278876
DNDLPVVQG	9	Unmodified	_DNDLPVVQG_					0	0	0		nc|ENSG00000137699|Q14134-2|TRIM29;ENSG00000137699|ENST00000341846|TRIM29	nc|ENSG00000137699|Q14134-2|TRIM29	nc|ENSG00000137699|Q14134-2|TRIM29	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.7361755371094	2	478.737814	955.461075	0.56453	0.00027026	-3.5236	-0.0016869	-2.9591	-0.0014166	478.7360434706385	78.907	1.1045	79.318	78.929	80.034	0.4106					57	25	4	0	0	0	0.6204	1	9034	9034		45.972	9.5255	1	847080			4794	4226	3283	3286	5350	5350					-0.018436997244634767
DNEEYIRAA	9	Unmodified	_DNEEYIRAA_					0	0	0			REV__ENSG00000104112|ENST00000220478|SCG3	REV__ENSG00000104112|ENST00000220478|SCG3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	541.2860107421875	2	540.751453	1079.48835	0.12115	6.5513E-05	4.334	0.0023436	4.4552	0.0024091	540.7531705190713	20.234	0.085823	20.31	20.258	20.344	0.07585					5	3	2	0	0	0	0.20789	1	483	483		15.642	12.923	1	23634	+		4795	17436	3284	3287	5351	5351					-0.04821216184086552
DNEGSDDDG	9	Unmodified	_DNEGSDDDG_					0	0	0		ENST00000556808.1_1_X:53114705-53115656:+|nuORF;ENSG00000184205|ENST00000375442|TSPYL2	ENST00000556808.1_1_X:53114705-53115656:+|nuORF	ENST00000556808.1_1_X:53114705-53115656:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	462.1474914550781	2	462.146683	922.278813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.184	1	75.138	74.638	75.638	-0.045982								0	0	0	0.36247	1	7405	7405		10.866	2.0432	1				4796	7589	3285	3288	5352	5352					-0.18543503927890015
DNFDTIAQF	9	Unmodified	_DNFDTIAQF_					0	0	0			REV__ENSG00000172348|ENST00000371374|RCAN2	REV__ENSG00000172348|ENST00000371374|RCAN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.742919921875	2	535.743096	1069.47164	-0.816	-0.00043717	0.65728	0.00035214	-0.15872	-8.5034E-05	535.7433567835764	61.922	1.4059	62.31	61.866	63.272	0.38846					81	31	4	0	0	0	0.64555	1	6644	6644		44.377	1.981	1	3172900	+		4797	21822	3286	3289	5353	5353					-0.060317170700500355
DNFDTIAQF	9	Unmodified	_DNFDTIAQF_					0	0	0			REV__ENSG00000172348|ENST00000371374|RCAN2	REV__ENSG00000172348|ENST00000371374|RCAN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7435302734375	2	535.743096	1069.47164	-0.46507	-0.00024916	0.37743	0.0002022	-0.087645	-4.6955E-05	535.7432029938302	61.809	1.1157	62.363	62.006	63.122	0.55386					82	25	4	0	0	0	0.3164	1	6639	6639		63.534	4.7519	1	3479600	+		4798	21822	3286	3289	5354	5354					-0.060317170700500355
DNFNFKPDK	9	Unmodified	_DNFNFKPDK_					0	0	0		ENSG00000140396|ENST00000452400|NCOA2	ENSG00000140396|ENST00000452400|NCOA2	ENSG00000140396|ENST00000452400|NCOA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.7694091796875	2	562.772188	1123.52982	-0.13096	-7.3702E-05	0.35028	0.00019713	0.21932	0.00012343	562.7724374182261	60.392	0.63914	60.945	60.621	61.26	0.55323					36	17	3	0	0	0	0.77696	1	6441	6441		31.53	0	1	1147400			4799	4429	3287	3290	5355	5355					-0.02700035424777525
DNGIVLKV	8	Unmodified	_DNGIVLKV_					0	0	0		nc|ENSG00000170381|O15041-2|SEMA3E;ENSG00000170381|ENST00000643230|SEMA3E	nc|ENSG00000170381|O15041-2|SEMA3E	nc|ENSG00000170381|O15041-2|SEMA3E	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.7499694824219	2	429.258185	856.501818	-1.7431	-0.00074825	2.1275	0.00091325	0.38438	0.000165	429.2590129250548	39.979	0.40479	39.986	39.831	40.236	0.0065041					14	9	2	0	0	0	0.4196	1	2530	2530		32.812	11.865	1	56230			4800	6580	3288	3291	5356	5356					0.06782686385793113
DNGKLKKVS	9	Unmodified	_DNGKLKKVS_					0	0	0			REV__ENSG00000136928|ENST00000259455|GABBR2	REV__ENSG00000136928|ENST00000259455|GABBR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.79339599609375	2	494.792924	987.571294	-0.22625	-0.00011195	0.3002	0.00014854	0.07395	3.659E-05	494.7928986334224	26.563	0.76746	26.524	26.237	27.004	-0.038525					33	17	3	0	0	0	0.78528	1	1201	1201		29.17	5.6474	1	99666	+		4801	19347	3289	3292	5357	5357					0.07701145334578996
DNGKSVQD	8	Unmodified	_DNGKSVQD_					0	0	0			REV__ENSG00000215704|ENST00000375910|CELA2B	REV__ENSG00000215704|ENST00000375910|CELA2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.698974609375	2	431.698689	861.382825	5.0231	0.0021685	-3.473	-0.0014993	1.5502	0.00066921	431.697108352617	107.75	0.40053	107.87	107.54	107.94	0.11715					29	17	2	0	0	0	0.89494	1	13182	13182		37.159	1.5408	1	2661600	+		4802	23690	3290	3293	5358	5358					-0.05341132309706609
DNGPMQPP	8	Unmodified	_DNGPMQPP_					0	0	0			REV__nc|ENSG00000136944|O60663-2|LMX1B	REV__nc|ENSG00000136944|O60663-2|LMX1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.69085693359375	2	428.186903	854.359253	0.13282	5.6873E-05	4.473	0.0019153	4.6058	0.0019722	428.18872922690895	94.107	1.8536	94.542	93.224	95.077	0.43539					86	46	2	0	0	0	0.88185	1	11274	11274		32.812	2.3088	1	1237400	+		4803	29876	3291	3294	5359	5359					-0.0737526934788093
DNGSGKSKR	9	Unmodified	_DNGSGKSKR_					0	0	0			REV__ENSG00000146038|ENST00000378454|DCDC2	REV__ENSG00000146038|ENST00000378454|DCDC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.7822570800781	2	474.746505	947.478456	0.8406	0.00039907	3.453	0.0016393	4.2936	0.0020384	474.74809378285954	35.024	0.49996	35.271	35.015	35.515	0.2477					20	12	2	0	0	0	0.20789	1	2679	2679		65.465	26.213	1	395630	+		4804	19983	3292	3295	5360	5360					0.0026164060119526766
DNIIRGGKILL	11	Unmodified	_DNIIRGGKILL_					0	0	0			REV__ENST00000511535.1_1_4:5823489-5889136:-|nuORF	REV__ENST00000511535.1_1_4:5823489-5889136:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5892639160156	3	404.587195	1210.73976	0.88744	0.00035905	4.0818	0.0016514	4.9692	0.0020105	404.58872084181826	39.368	1.6571	39.379	38.582	40.239	0.011173					116	38	4	0	0	0	0.76251	1	2721	2721		19.263	1.4295	1	391440	+		4805	15835	3293	3296	5361	5361					0.14281627248237783
DNINKTEN	8	Unmodified	_DNINKTEN_					0	0	0			REV__ENSG00000204361|ENST00000389586|NXPE2	REV__ENSG00000204361|ENST00000389586|NXPE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2228698730469	2	474.225071	946.435589	-0.93499	-0.00044339	-3.7911	-0.0017978	-4.7261	-0.0022412	474.2234010405558	66.547	1.5603	67.098	66.602	68.163	0.55071					86	44	4	0	0	0	0.8537	1	7313	7313		25.574	0	1	724640	+		4806	23486	3294	3297	5362	5362					-0.03977174246904269
DNISHGLL	8	Unmodified	_DNISHGLL_					0	0	0		ENST00000534047.5_1_11:10518329-10527428:+|nuORF;nc|ENSG00000133805|Q01432-6|AMPD3;ENSG00000133805|ENST00000396553|AMPD3;nc|ENSG00000133805|Q01432-5|AMPD3;nc|ENSG00000133805|Q01432-4|AMPD3;nc|ENSG00000133805|Q01432-3|AMPD3	ENST00000534047.5_1_11:10518329-10527428:+|nuORF	ENST00000534047.5_1_11:10518329-10527428:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801208496094	2	434.729792	867.445031	0.46319	0.00020136	0.010917	4.7457E-06	0.47411	0.00020611	434.72966265791496	34.365	0.82838	34.575	34.149	34.978	0.21003					41	19	3	0	0	0	0.4196	1	2539	2539		29.15	0	1	1187100			4807	3894	3295	3298	5363	5363					0.006006388292917109
DNKQLQGY	8	Unmodified	_DNKQLQGY_					0	0	0		nc|ENSG00000143199|Q96PN6-4|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;ENSG00000143199|ENST00000367851|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.728515625	2	483.237981	964.461409	-0.45594	-0.00022033	-2.2318	-0.0010785	-2.6878	-0.0012988	483.236828385835	73.616	0.61022	74.004	73.762	74.372	0.38779					25	16	2	0	0	0	0.4196	1	8305	8305		31.955	0	1	313160			4808	4611	3296	3299	5364	5364					-0.022242800046228695
DNLAQKPV	8	Unmodified	_DNLAQKPV_					0	0	0		nc|ENSG00000128815|Q6ZS81-3|WDFY4	nc|ENSG00000128815|Q6ZS81-3|WDFY4	nc|ENSG00000128815|Q6ZS81-3|WDFY4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.7447814941406	2	442.745442	883.476331	-1.7989	-0.00079645	0.64724	0.00028656	-1.1517	-0.00050989	442.7455184969909	89.936	0.89783	90.111	89.737	90.635	0.17579					46	20	3	0	0	0	0.89494	1	8953	8953		37.159	1.5408	1	505310			4809	14900	3297	3300	5365	5365					0.029932118633723803
DNLDEGPPL	9	Unmodified	_DNLDEGPPL_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.2843933105469	2	485.229822	968.445091	-0.090001	-4.3671E-05	1.8468	0.00089614	1.7568	0.00085247	485.2342746413772	72.226	0.42516	72.263	72.053	72.478	0.037148					29	16	3	0	0	0	0.20789	1	6874	6874		76.774	25.439	1	50463	+		4810	21801	3298	3301	5366	5366					-0.04039405961373177
DNLDSSGTSGR	11	Unmodified	_DNLDSSGTSGR_					0	0	0			REV__ENSG00000147041|ENST00000297875|SYTL5	REV__ENSG00000147041|ENST00000297875|SYTL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.7500610351562	2	554.746899	1107.47924	-0.50925	-0.00028251	3.9194	0.0021743	3.4102	0.0018918	554.7489661631395	35.684	0.73286	35.694	35.34	36.073	0.0092773					36	15	3	0	0	0	0.48313	1	2290	2290		53.089	11.662	1	225980	+		4811	20047	3299	3302	5367	5367					-0.07019609540407146
DNLIISLCKF	10	Unmodified	_DNLIISLCKF_					0	0	0		nc|ENSG00000107862|Q92538-3|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-1|GBF1;ENSG00000107862|ENST00000369983|GBF1	nc|ENSG00000107862|Q92538-3|GBF1	nc|ENSG00000107862|Q92538-3|GBF1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	583.318115234375	2	583.317917	1164.62128	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.73	1	119.82	119.32	120.32	0.087753								0	0	0	0.45132	1	12579	12579		10.866	0.6003	1				4812	2375	3300	3303	5368	5368					0.04555511948183266
DNLLDGHHFA	10	Unmodified	_DNLLDGHHFA_					0	0	0			REV__ENSG00000153822|ENST00000392671|KCNJ16	REV__ENSG00000153822|ENST00000392671|KCNJ16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.7666625976562	2	569.767437	1137.52032	0.45975	0.00026195	-1.6229	-0.0009247	-1.1632	-0.00066275	569.7664341566348	60.58	0.57011	60.681	60.319	60.889	0.10082					44	24	2	0	0	0	0.86348	1	5267	5267		31.53	1.2121	1	542490	+		4813	20359	3301	3304	5369	5369					-0.0429380371026582
DNLLNDLTGY	10	Unmodified	_DNLLNDLTGY_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.2755126953125	2	569.274761	1136.53497	-1.0015	-0.00057015	1.1111	0.0006325	0.10954	6.2356E-05	569.2753008923387	58.655	0.52158	58.655	58.377	58.898	0					56	23	3	0	0	0	0.85981	2	5075	5075;5105		35.152	5.982	1	173440	+		4814	21064	3302	3305	5370;5371	5370					-0.02783776352816858
DNLLNDLTGY	10	Unmodified	_DNLLNDLTGY_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.2733764648438	2	569.274761	1136.53497	-1.155	-0.0006575	1.371	0.00078046	0.21599	0.00012296	569.2755945956161	58.672	0.65927	58.659	58.318	58.977	-0.013729					50	23	3	0	0	0	0.67571	1	5337	5337		45.972	4.5456	1	186800	+		4815	21064	3302	3305	5372	5372					-0.02783776352816858
DNLLNDLTGY	10	Unmodified	_DNLLNDLTGY_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.274658203125	2	569.274761	1136.53497	-0.11342	-6.4567E-05	-0.020574	-1.1712E-05	-0.13399	-7.6279E-05	569.2748468020036	58.534	0.62846	58.568	58.24	58.869	0.033905					49	21	3	0	0	0	0.31985	1	5375	5375		70.816	12.586	1	202570	+		4816	21064	3302	3305	5373	5373					-0.02783776352816858
DNLLNDLTGY	10	Unmodified	_DNLLNDLTGY_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.2747802734375	2	569.274761	1136.53497	0.45077	0.00025661	-0.25919	-0.00014755	0.19158	0.00010906	569.274532960243	58.596	0.96936	58.683	58.327	59.296	0.087002					138	45	4	0	0	0	0.14384	5	4988	4972;4988;5009;5017;5023		95.815	4.906	1	2576000	+		4817	21064	3302	3305	5374;5375;5376;5377;5378	5375					-0.02783776352816858
DNLLNDLTGY	10	Unmodified	_DNLLNDLTGY_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.275146484375	2	569.274761	1136.53497	0.4898	0.00027883	-0.3771	-0.00021467	0.1127	6.4158E-05	569.2744694870318	58.537	1.2979	58.647	58.343	59.641	0.11027					132	48	4	0	0	0	0.062066	2	4982	4982;5006		107.01	13.864	1	2907600	+		4818	21064	3302	3305	5379;5380	5379					-0.02783776352816858
DNLLNDLTGY	10	Unmodified	_DNLLNDLTGY_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.2749633789062	2	569.274761	1136.53497	-0.34666	-0.00019734	0.54542	0.00031049	0.19876	0.00011315	569.2749940936244	58.625	1.0905	58.617	58.275	59.365	-0.0074425					124	43	4	0	0	0	0.14384	3	5004	4981;5004;5017		95.815	7.8432	1	2598100	+		4819	21064	3302	3305	5381;5382;5383	5382					-0.02783776352816858
DNLRKLLLL	9	Unmodified	_DNLRKLLLL_					0	0	0			REV__nc|ENSG00000146966|Q9ULE3-2|DENND2A	REV__nc|ENSG00000146966|Q9ULE3-2|DENND2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.7505493164062	2	549.355691	1096.69683	-0.49777	-0.00027345	0.48305	0.00026537	-0.014718	-8.0854E-06	549.3558237922598	54.094	0.66765	54.679	54.333	55.001	0.58474					39	15	3	0	0	0	0.20789	1	5552	5552		40.778	8.8233	1	785990	+		4820	29919	3303	3306	5384	5384					0.15234857190807816
DNLVEQNVL	9	Unmodified	_DNLVEQNVL_					0	0	0		ENSG00000196954|ENST00000444739|CASP4;ENST00000529183.5_1_11:104820451-104839261:-|nuORF;ENST00000531333.5_1_11:104821760-104839261:-|nuORF;nc|ENSG00000196954|P49662-3|CASP4;ENST00000533730.5_1_11:104822704-104839261:-|nuORF;nc|ENSG00000196954|P49662-5|CASP4;ENST00000531546.1_1_11:104822523-104839261:-|nuORF;nc|ENSG00000196954|P49662-4|CASP4;ENST00000524843.5_1_11:104820261-104839261:-|nuORF	ENSG00000196954|ENST00000444739|CASP4	ENSG00000196954|ENST00000444739|CASP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.272216796875	2	522.272021	1042.52949	-0.37409	-0.00019538	-1.733	-0.00090511	-2.1071	-0.0011005	522.270722987466	47.085	0.78327	47.556	47.3	48.084	0.47139					26	18	2	0	0	0	0.36616	1	4471	4471		60.118	8.9256	1	1291500			4821	8118	3304	3307	5385	5385					0.009925448553985916
DNMPSHIASEL	11	Unmodified	_DNMPSHIASEL_					0	0	0			REV__ENSG00000174718|ENST00000312561|RESF1	REV__ENSG00000174718|ENST00000312561|RESF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	607.2791748046875	2	607.27952	1212.54449	-0.75772	-0.00046015	0.32849	0.00019949	-0.42923	-0.00026066	607.279446198653	42.848	0.57951	43.281	43.006	43.586	0.4334					34	13	3	0	0	0	0.55601	1	3838	3838		47.96	0.30219	1	1499600	+		4822	22009	3305	3308	5386	5386					-0.05328331338932912
DNNQYASVLN	10	Unmodified	_DNNQYASVLN_					0	0	0			REV__ENSG00000166200|ENST00000388901|COPS2	REV__ENSG00000166200|ENST00000388901|COPS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.7614135742188	2	569.262185	1136.50982	-0.99519	-0.00056652	-1.1113	-0.00063263	-2.1065	-0.0011992	569.7625900096699	42.995	0.88801	42.959	42.56	43.448	-0.035816					59	20	4	0	0	0	0.85981	1	3307	3307		35.152	3.1972	1	332400	+		4823	21267	3306	3309	5387	5387					-0.052978311553715685
DNPLKSSSQ	9	Unmodified	_DNPLKSSSQ_					0	0	0			REV__ENSG00000023516|ENST00000025301|AKAP11	REV__ENSG00000023516|ENST00000025301|AKAP11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	488.23870849609375	2	488.240721	974.466889	-0.68617	-0.00033502	-3.2974	-0.0016099	-3.9835	-0.0019449	488.23901315682974	60.731	0.68857	60.739	60.422	61.11	0.0081215					89	25	5	0	0	0	0.76764	1	5254	5254		34.173	3.6689	1	1290700	+		4824	16251	3307	3310	5388	5388					-0.021366012127941758
DNPVCCGCNM	10	Unmodified	_DNPVCCGCNM_					0	0	0			REV__ENST00000272645.8_1_2:128604526-128604598:-|nuORF	REV__ENST00000272645.8_1_2:128604526-128604598:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	527.8380737304688	2	528.174298	1054.33404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.016	1	69.151	68.651	69.651	0.13522								0	0	0	0.45132	1	6225	6225		19.997	2.6318	1		+		4825	24549	3308	3311	5389	5389					-0.19095151528631504
DNQPCLDLI	9	Unmodified	_DNQPCLDLI_					0	0	0		nc|ENSG00000278259|Q96H55-3|MYO19;ENSG00000278259|ENST00000614623|MYO19	nc|ENSG00000278259|Q96H55-3|MYO19	nc|ENSG00000278259|Q96H55-3|MYO19	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2247924804688	2	515.747324	1029.4801	0.59374	0.00030622	-1.1846	-0.00061093	-0.59081	-0.00030471	515.7466236612161	51.687	0.6517	52.354	52.063	52.715	0.66729					17	15	2	0	0	0	0.20789	1	5200	5200		25.574	0	1	169280			4826	9029	3309	3312	5390	5390					-0.033464864250845494
DNQPCLDLI	9	Unmodified	_DNQPCLDLI_					0	0	0		nc|ENSG00000278259|Q96H55-3|MYO19;ENSG00000278259|ENST00000614623|MYO19	nc|ENSG00000278259|Q96H55-3|MYO19	nc|ENSG00000278259|Q96H55-3|MYO19	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	515.747324	1029.4801	0.23311	0.00012022	-0.088901	-4.585E-05	0.14421	7.4374E-05	515.7471107101968	51.847	0.37703	52.278	52.071	52.448	0.43081	-0.038273	0.00089669	NaN	13.454	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146790			4827	9029	3309	3312							-0.033464864250845494
DNQSYNLI	8	Unmodified	_DNQSYNLI_					0	0	0			REV__ENST00000497429.5_1_11:13380020-13391245:+|nuORF	REV__ENST00000497429.5_1_11:13380020-13391245:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7287292480469	2	483.729989	965.445425	-0.76587	-0.00037047	-1.8588	-0.00089915	-2.6247	-0.0012696	483.72888486758	72.257	0.87394	72.643	72.125	72.999	0.38581					43	20	3	0	0	0	0.93293	1	8069	8069		51.335	10.763	1	1359000	+		4828	19096	3310	3313	5391	5391					-0.03867986241516519
DNRRKPVL	8	Unmodified	_DNRRKPVL_					0	0	0		ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.29949951171875	2	499.298707	996.582862	-0.066828	-3.3367E-05	2.828	0.001412	2.7612	0.0013787	499.30004992188253	77.651	1.036	78.219	77.879	78.915	0.56835					52	24	3	0	0	0	0.90837	1	8863	8863		56.721	9.0637	1	653260			4829	2653	3311	3314	5392	5392					0.08443387148565762
DNRVQTDPQKP	11	Unmodified	_DNRVQTDPQKP_					0	0	0		nc|ENSG00000168743|Q6UXI9-2|NPNT;nc|ENSG00000168743|Q6UXI9-5|NPNT;ENSG00000168743|ENST00000379987|NPNT;nc|ENSG00000168743|Q6UXI9-4|NPNT;nc|ENSG00000168743|Q6UXI9-6|NPNT;nc|ENSG00000168743|Q6UXI9-3|NPNT	nc|ENSG00000168743|Q6UXI9-2|NPNT	nc|ENSG00000168743|Q6UXI9-2|NPNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.2231750488281	3	433.221352	1296.64223	-0.17127	-7.4197E-05	3.2997	0.0014295	3.1284	0.0013553	433.2226408831067	61.937	1.0279	61.927	61.564	62.591	-0.0094147					54	18	4	0	0	0	0.69687	1	5731	5731		32.034	3.9526	1	814390			4830	6430	3312	3315	5393	5393					0.005771935813982054
DNVAENIRGLP	11	Unmodified	_DNVAENIRGLP_					0	0	0			REV__nc|ENSG00000143643|Q8NBP0-2|TTC13	REV__nc|ENSG00000143643|Q8NBP0-2|TTC13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	599.3108520507812	2	599.314751	1196.61495	-1.8597	-0.0011146	-3.935	-0.0023583	-5.7947	-0.0034728	599.3121904542354	41.828	0.5064	42.462	42.28	42.786	0.6339					30	12	3	0	0	0	0.43522	1	3711	3711		56.632	12.255	1	1243400	+		4831	19830	3313	3316	5394	5394					0.024507100410573912
DNVAYAQGV	9	Unmodified	_DNVAYAQGV_					0	0	0		nc|ENSG00000166961|Q8N5U1-2|MS4A15;nc|ENSG00000166961|Q8N5U1-3|MS4A15;ENSG00000166961|ENST00000405633|MS4A15	nc|ENSG00000166961|Q8N5U1-2|MS4A15	nc|ENSG00000166961|Q8N5U1-2|MS4A15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.72412109375	2	468.724707	935.43486	-1.0176	-0.000477	-1.941	-0.00090978	-2.9586	-0.0013868	468.7236481671381	70.265	0.71931	70.303	70.071	70.79	0.038055					54	36	2	0	0	0	0.71772	1	6719	6719		39.253	5.7372	1	311830			4832	6253	3314	3317	5395	5395					-0.03543968895951366
DNVDAEYIWVS	11	Unmodified	_DNVDAEYIWVS_					0	0	0		ENST00000447061.2_1_2:38512560-38513046:+|nuORF	ENST00000447061.2_1_2:38512560-38513046:+|nuORF	ENST00000447061.2_1_2:38512560-38513046:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.22967529296875	3	437.534825	1309.58265	-0.93663	-0.00040981	-1.1	-0.00048129	-2.0366	-0.0008911	437.534233700212	28.281	0.21137	28.184	28.049	28.261	-0.096947					5	4	2	0	0	0	0.17354	1	1705	1705		35.496	17.663	1	13639			4833	11843	3315	3318	5396	5396					-0.059761221526287045
DNVLGDGGVK	10	Unmodified	_DNVLGDGGVK_					0	0	0		ENSG00000158077|ENST00000299481|NLRP14	ENSG00000158077|ENST00000299481|NLRP14	ENSG00000158077|ENST00000299481|NLRP14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	488.17645263671875	2	487.251089	972.487624	-1.7315	-0.00084369	1.6518	0.00080486	-0.079677	-3.8823E-05	487.2518053876809	31.551	0.75801	31.544	31.142	31.9	-0.0061455					26	17	2	0	0	0	0.37624	1	1741	1741		27.047	0	1	66247			4834	5460	3316	3319	5397	5397					0.0002798916685833319
DNVVVRTACC	10	Carbamidomethyl (C)	_DNVVVRTACC(Carbamidomethyl (C))_	DNVVVRTAC(0.119)C(0.881)		DNVVVRTAC(-8.7)C(8.7)		0	1	0		ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.7651977539062	2	568.762983	1135.51141	0.77918	0.00044317	3.3268	0.0018921	4.106	0.0023353	568.7647838120163	83.726	1.9818	83.657	83.085	85.067	-0.069313					114	45	4	0	0	0	0.47091	1	8538	8538		58.23	7.0372	2	1633100			4835	7925	3317	3320	5398	5398	94				-0.05092236662630967
DNYSEEEY	8	Unmodified	_DNYSEEEY_					0	0	0		nc|ENSG00000179364|Q86VP3-4|PACS2;nc|ENSG00000179364|Q86VP3|PACS2;ENSG00000179364|ENST00000447393|PACS2;ENST00000552138.5_1_14:105821400-105836438:+|nuORF	nc|ENSG00000179364|Q86VP3-4|PACS2	nc|ENSG00000179364|Q86VP3-4|PACS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.6884765625	2	524.690726	1047.3669	0.84821	0.00044505	-3.4203	-0.0017946	-2.5721	-0.0013496	524.6888228565127	26.684	0.8567	26.656	26.191	27.048	-0.027706					40	19	3	0	0	0	0.8347	1	1175	1175		23.042	4.7181	1	95922			4836	7267	3318	3321	5399	5399					-0.15488883337275183
DPAALTLILH	10	Unmodified	_DPAALTLILH_					0	0	0			REV__ENST00000324333.14_1_9:3827742-3827916:-|nuORF	REV__ENST00000324333.14_1_9:3827742-3827916:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.758544921875	2	532.310949	1062.60735	-0.05156	-2.7446E-05	3.6978	0.0019684	3.6462	0.0019409	532.3127229875743	82.883	0.65547	83.315	82.962	83.618	0.43108					27	15	2	0	0	0	0.37624	1	9628	9628		10.265	0	1	317660	+		4837	25044	3319	3322	5400	5400					0.0785460251142922
DPAAPASEMNK	11	Unmodified	_DPAAPASEMNK_					0	0	0			REV__ENST00000560300.1_1_15:61333313-61521429:-|nuORF	REV__ENST00000560300.1_1_15:61333313-61521429:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.2842407226562	2	565.760963	1129.50737	0.5698	0.00032237	2.0452	0.0011571	2.615	0.0014795	566.264524748891	76.239	0.60222	76.807	76.474	77.077	0.56835					22	15	2	0	0	0	0.1731	1	8638	8638		28.081	9.7571	1	141930	+		4838	28723	3320	3323	5401	5401					-0.052200028846982605
DPADIIHDF	9	Unmodified	_DPADIIHDF_					0	0	0		nc|ENSG00000135916|Q9NQX7-2|ITM2C;nc|ENSG00000135916|Q9NQX7-3|ITM2C;ENSG00000135916|ENST00000326427|ITM2C	nc|ENSG00000135916|Q9NQX7-2|ITM2C	nc|ENSG00000135916|Q9NQX7-2|ITM2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.7453002929688	2	521.745639	1041.47673	0.54261	0.0002831	-1.337	-0.00069759	-0.79443	-0.00041449	521.7447942771344	75.747	1.2054	76.143	75.532	76.737	0.39507					68	28	3	0	0	0	3.1417E-05	4	8583	8566;8583;8601;8613		152.47	66.333	1	1275900			4839	4066	3321	3324	5402;5403;5404;5405	5403					-0.04235413207447891
DPADIIHDF	9	Unmodified	_DPADIIHDF_					0	0	0		nc|ENSG00000135916|Q9NQX7-2|ITM2C;nc|ENSG00000135916|Q9NQX7-3|ITM2C;ENSG00000135916|ENST00000326427|ITM2C	nc|ENSG00000135916|Q9NQX7-2|ITM2C	nc|ENSG00000135916|Q9NQX7-2|ITM2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7445068359375	2	521.745639	1041.47673	0.018013	9.3983E-06	-0.72037	-0.00037585	-0.70236	-0.00036645	521.7451251099496	75.602	1.3414	76.166	75.626	76.967	0.56458					78	32	4	0	0	0	1.3366E-20	5	8572	8567;8572;8594;8606;8628		181.81	88.61	1	1339300			4840	4066	3321	3324	5406;5407;5408;5409;5410	5407					-0.04235413207447891
DPAEELEVL	9	Unmodified	_DPAEELEVL_					0	0	0			REV__ENST00000355977.10_1_1:67390609-67423761:+|nuORF	REV__ENST00000355977.10_1_1:67390609-67423761:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.75323486328125	2	507.75313	1013.49171	-0.78055	-0.00039633	0.61029	0.00030988	-0.17026	-8.645E-05	507.75333135770444	62.615	1.2565	63.002	62.534	63.791	0.3878					81	28	4	0	0	0	0.25483	1	6736	6736		68.787	2.9837	1	1463300	+		4841	25384	3322	3325	5411	5411					-0.014499661300874322
DPAILDLI	8	Unmodified	_DPAILDLI_					0	0	0		nc|ENSG00000239474|O60662-2|KLHL41;ENSG00000239474|ENST00000284669|KLHL41	nc|ENSG00000239474|O60662-2|KLHL41	nc|ENSG00000239474|O60662-2|KLHL41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25146484375	2	435.252569	868.490584	0.1561	6.7942E-05	-3.024	-0.0013162	-2.8679	-0.0012483	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.85277	1	7556	7556		25.45	3.4903	1	3292300			4842	8770	3323	3326	5412	5412					0.05107864291676378
DPAILDLII	9	Unmodified	_DPAILDLII_					0	0	0		nc|ENSG00000239474|O60662-2|KLHL41;ENSG00000239474|ENST00000284669|KLHL41	nc|ENSG00000239474|O60662-2|KLHL41	nc|ENSG00000239474|O60662-2|KLHL41	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7956848144531	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.203	1	59.19	58.69	59.69	-0.013729								0	0	0	0.30053	1	5422	5422		30.504	5.0535	1				4843	8770	3324	3327	5413	5413					0.08312395388577443
DPAILDLII	9	Unmodified	_DPAILDLII_					0	0	0		nc|ENSG00000239474|O60662-2|KLHL41;ENSG00000239474|ENST00000284669|KLHL41	nc|ENSG00000239474|O60662-2|KLHL41	nc|ENSG00000239474|O60662-2|KLHL41	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.796630859375	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.264	1	59.25	58.75	59.75	-0.013729								0	0	0	0.31828	1	5430	5430		24.203	2.5004	1				4844	8770	3324	3327	5414	5414					0.08312395388577443
DPAILDLII	9	Unmodified	_DPAILDLII_					0	0	0		nc|ENSG00000239474|O60662-2|KLHL41;ENSG00000239474|ENST00000284669|KLHL41	nc|ENSG00000239474|O60662-2|KLHL41	nc|ENSG00000239474|O60662-2|KLHL41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7958679199219	2	491.794601	981.574648	-0.67834	-0.0003336	2.9863	0.0014686	2.3079	0.001135	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.7932	1	4297	4297		21.96	1.013	1	1111900			4845	8770	3324	3327	5415	5415					0.08312395388577443
DPAILDLII	9	Unmodified	_DPAILDLII_					0	0	0		nc|ENSG00000239474|O60662-2|KLHL41;ENSG00000239474|ENST00000284669|KLHL41	nc|ENSG00000239474|O60662-2|KLHL41	nc|ENSG00000239474|O60662-2|KLHL41	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79644775390625	2	491.794601	981.574648	-0.71316	-0.00035073	3.1449	0.0015467	2.4318	0.0011959	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.78536	1	3932	3932		29.15	2.3535	1	1219600			4846	8770	3324	3327	5416	5416					0.08312395388577443
DPAILPLQ	8	Unmodified	_DPAILPLQ_					0	0	0		ENST00000451894.6_1_5:43041964-43043654:+|nuORF	ENST00000451894.6_1_5:43041964-43043654:+|nuORF	ENST00000451894.6_1_5:43041964-43043654:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.23883056640625	2	433.752736	865.490919	-1.5963	-0.00069238	-0.3993	-0.0001732	-1.9956	-0.00086558	433.752475666729	76.629	0.75999	76.754	76.027	76.787	0.12485					35	23	2	0	0	0	0.4196	1	7166	7166		18.324	0	1	35098			4847	11909	3325	3328	5417	5417					0.052792840115330364
DPAKEIKKQVR	11	Unmodified	_DPAKEIKKQVR_					0	0	0		nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;ENSG00000082397|ENST00000341928|EPB41L3;nc|ENSG00000082397|Q9Y2J2-3|EPB41L3	nc|ENSG00000082397|Q9Y2J2-2|EPB41L3	nc|ENSG00000082397|Q9Y2J2-2|EPB41L3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2638854980469	3	437.929621	1310.76703	0.23602	0.00010336	-2.9682	-0.0012998	-2.7321	-0.0011965	438.2630794988371	45.346	1.3309	45.389	44.445	45.776	0.042599					44	32	2	0	0	0	0.74022	1	3218	3218		24.232	6.3987	1	183310			4848	1484	3326	3329	5418	5418					0.12408110788578597
DPALARLL	8	Unmodified	_DPALARLL_					0	0	0			REV__nc|ENSG00000109794|A5PLN7-4|FAM149A	REV__nc|ENSG00000109794|A5PLN7-4|FAM149A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77996826171875	2	434.766178	867.517802	0.024371	1.0596E-05	3.1789	0.0013821	3.2033	0.0013927	434.76781306071143	38.286	0.2146	38.258	38.084	38.299	-0.027843					6	4	2	0	0	0	0.4196	1	2563	2563		38.806	6.8513	1	17111	+		4849	17774	3327	3330	5419	5419					0.07874392622716186
DPALGQVILRR	11	Unmodified	_DPALGQVILRR_					0	0	0			REV__ENST00000424094.6_1_20:57394171-57417508:-|nuORF	REV__ENST00000424094.6_1_20:57394171-57417508:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.3780517578125	2	619.372404	1236.73025	1.9872	0.0012308	-2.1821	-0.0013515	-0.19486	-0.00012069	619.3705755303217	101.25	1.7847	101.55	101.13	102.91	0.2999					90	48	3	0	0	0	0.74763	1	12247	12247		22.58	0	1	2252000	+		4850	26514	3328	3331	5420	5420					0.12135858962687962
DPALGQVILRR	11	Unmodified	_DPALGQVILRR_					0	0	0			REV__ENST00000424094.6_1_20:57394171-57417508:-|nuORF	REV__ENST00000424094.6_1_20:57394171-57417508:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3704833984375	2	619.372404	1236.73025	3.0782	0.0019065	-4.3798	-0.0027127	-1.3016	-0.00080619	619.8710459081657	101.29	0.9677	101.61	101.32	102.29	0.32511					61	26	3	0	0	0	0.72739	1	12358	12358		27.047	0.3544	1	2930100	+		4851	26514	3328	3331	5421	5421					0.12135858962687962
DPALLKVL	8	Unmodified	_DPALLKVL_					0	0	0		nc|ENSG00000158163|Q8IYY4-2|DZIP1L;ENSG00000158163|ENST00000327532|DZIP1L	nc|ENSG00000158163|Q8IYY4-2|DZIP1L	nc|ENSG00000158163|Q8IYY4-2|DZIP1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77996826171875	2	434.778754	867.542954	-0.097946	-4.2585E-05	2.9953	0.0013023	2.8973	0.0012597	434.7799034741548	53.402	2.1549	53.397	52.578	54.733	-0.0053673					128	65	3	0	0	0	0.86791	1	4813	4813		28.254	0	1	357680			4852	5465	3329	3332	5422	5422					0.10388447425293634
DPALLKVL	8	Unmodified	_DPALLKVL_					0	0	0		nc|ENSG00000158163|Q8IYY4-2|DZIP1L;ENSG00000158163|ENST00000327532|DZIP1L	nc|ENSG00000158163|Q8IYY4-2|DZIP1L	nc|ENSG00000158163|Q8IYY4-2|DZIP1L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.251708984375	2	434.778754	867.542954	-1.5667	-0.00068117	4.3952	0.001911	2.8285	0.0012298	434.78077547023094	81.722	1.5522	81.867	81.232	82.784	0.14513					62	36	2	0	0	0	0.4196	1	7893	7893		40.573	1.7665	1	68583			4853	5465	3329	3332	5423	5423					0.10388447425293634
DPAPICFC	8	Unmodified	_DPAPICFC_					0	0	0			REV__ENSG00000167880|ENST00000301607|EVPL	REV__ENSG00000167880|ENST00000301607|EVPL	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.2801208496094	2	433.182774	864.350996	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.34	1	66.304	65.804	66.804	-0.035217								0	0	0	0.29353	1	6341	6341		28.254	1.4582	1		+		4854	21433	3330	3333	5424	5424					-0.08660539588856864
DPAPPVVGLP	10	Unmodified	_DPAPPVVGLP_					0	0	0			REV__ENST00000320442.8_1_12:58014065-58016599:+|nuORF	REV__ENST00000320442.8_1_12:58014065-58016599:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.267333984375	2	481.271293	960.528032	-1.0166	-0.00048927	-2.9798	-0.0014341	-3.9964	-0.0019234	481.26964636333344	29.702	0.51017	29.687	29.476	29.987	-0.015165					26	13	3	0	0	0	0.86452	1	1510	1510		30.504	0.6621	1	29642	+		4855	24998	3331	3334	5425	5425					0.046189555572937024
DPAPPVVGLP	10	Unmodified	_DPAPPVVGLP_					0	0	0			REV__ENST00000320442.8_1_12:58014065-58016599:+|nuORF	REV__ENST00000320442.8_1_12:58014065-58016599:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	481.271293	960.528032	0.30134	0.00014503	-4.7054	-0.0022646	-4.4041	-0.0021196	481.2690100757908	29.576	0.30421	29.607	29.544	29.848	0.030945	-0.040095	-0.00056402	NaN	30.504	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25772	+		4856	24998	3331	3334							0.046189555572937024
DPAPPVVGLP	10	Unmodified	_DPAPPVVGLP_					0	0	0			REV__ENST00000320442.8_1_12:58014065-58016599:+|nuORF	REV__ENST00000320442.8_1_12:58014065-58016599:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	481.271293	960.528032	-1.0166	-0.00048927	-2.9798	-0.0014341	-3.9964	-0.0019234	481.26964636333344	29.702	0.51017	29.687	29.476	29.987	-0.015165	0.040095	0.001097	NaN	30.504	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29642	+		4857	24998	3331	3334							0.046189555572937024
DPAQRVVL	8	Unmodified	_DPAQRVVL_					0	0	0		ENST00000460980.5_1_7:150773814-150775027:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-4|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;ENSG00000164896|ENST00000297532|FASTK	ENST00000460980.5_1_7:150773814-150775027:-|nuORF	ENST00000460980.5_1_7:150773814-150775027:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2601318359375	2	449.261259	896.507966	0.47902	0.00021521	-2.0825	-0.00093559	-1.6035	-0.00072038	449.2601268412696	70.509	0.67209	70.638	70.305	70.977	0.12965					54	34	2	0	0	0	0.86288	1	6405	6405		26.796	2.2769	1	260720			4858	6019	3332	3335	5426	5426					0.05557204617343814
DPAQRVVLVLR	11	Unmodified	_DPAQRVVLVLR_					0	0	0		ENST00000460980.5_1_7:150773814-150775027:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-4|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;ENSG00000164896|ENST00000297532|FASTK	ENST00000460980.5_1_7:150773814-150775027:-|nuORF	ENST00000460980.5_1_7:150773814-150775027:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.59234619140625	3	422.594461	1264.76155	-0.026175	-1.1061E-05	-4.2947	-0.0018149	-4.3209	-0.001826	422.59256755528145	49.138	2.4235	49.133	48.474	50.898	-0.0056419					208	62	5	0	0	0	0.77205	1	4043	4043		17.167	0.44936	1	1959300			4859	6019	3333	3336	5427	5427					0.13976431996798055
DPAQVKLLPGR	11	Unmodified	_DPAQVKLLPGR_					0	0	0		nc|ENSG00000250510|Q16538-2|GPR162;ENSG00000250510|ENST00000311268|GPR162	nc|ENSG00000250510|Q16538-2|GPR162	nc|ENSG00000250510|Q16538-2|GPR162	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3572998046875	2	597.35368	1192.69281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.1	1	95.532	95.032	96.032	0.4324								0	0	0	0.56276	1	11366	11366		36.447	3.6343	1				4860	8846	3334	3337	5428	5428					0.10416767697074647
DPASCVPL	8	Unmodified	_DPASCVPL_					0	0	0		ENST00000262428.4_1_16:84599953-84600082:-|nuORF	ENST00000262428.4_1_16:84599953-84600082:-|nuORF	ENST00000262428.4_1_16:84599953-84600082:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	401.1940002441406	2	401.194196	800.37384	-1.2617	-0.00050619	-1.7284	-0.00069341	-2.9901	-0.0011996	401.193516495884	82.58	1.097	82.58	82.077	83.174	0					52	26	3	0	0	0	0.884	1	7689	7689		33.516	1.5607	1	110510			4861	9438	3335	3338	5429	5429					-0.03433197199740334
DPASGICTLLY	11	Unmodified	_DPASGICTLLY_					0	0	0		ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1	ENSG00000067177|ENST00000373542|PHKA1	ENSG00000067177|ENST00000373542|PHKA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8431396484375	2	576.783907	1151.55326	-1.759	-0.0010146	-1.8268	-0.0010536	-3.5857	-0.0020682	576.782675922612	90.582	0.50513	91.053	90.855	91.36	0.47069					24	12	2	0	0	0	0.16958	1	10764	10764		58.782	22.335	1	306680			4862	1178	3336	3339	5430	5430					-0.01645357702432193
DPASIVLR	8	Unmodified	_DPASIVLR_					0	0	0			REV__ENSG00000108510|ENST00000397786|MED13	REV__ENSG00000108510|ENST00000397786|MED13	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25323486328125	2	435.75581	869.497067	-1.3916	-0.00060639	-1.7051	-0.000743	-3.0967	-0.0013494	435.75536514591766	75.799	0.57358	75.887	75.613	76.186	0.087639					21	14	2	0	0	0	0.4196	1	7070	7070		20.947	0	1	77156	+		4863	17715	3337	3340	5431	5431					0.0570980224304094
DPASLAVFRFL	11	Unmodified	_DPASLAVFRFL_					0	0	0		ENSG00000115486|ENST00000233838|GGCX;ENST00000496962.1_1_2:85786016-85788551:-|nuORF	ENSG00000115486|ENST00000233838|GGCX	ENSG00000115486|ENST00000233838|GGCX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.345703125	2	618.342781	1234.67101	2.5351	0.0015676	2.4621	0.0015224	4.9972	0.00309	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.65746	1	10564	10564		37.812	0.30334	1	980120			4864	2849	3338	3341	5432	5432					0.0630596294854513
DPASLAVFRFL	11	Unmodified	_DPASLAVFRFL_					0	0	0		ENSG00000115486|ENST00000233838|GGCX;ENST00000496962.1_1_2:85786016-85788551:-|nuORF	ENSG00000115486|ENST00000233838|GGCX	ENSG00000115486|ENST00000233838|GGCX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.3463745117188	2	618.342781	1234.67101	0.89263	0.00055195	4.1677	0.002577	5.0603	0.003129	618.3452359789501	97.829	3.1632	97.989	96.92	100.08	0.16073					214	73	4	0	0	0	0.67778	1	10143	10143		35.152	3.6222	1	874220			4865	2849	3338	3341	5433	5433					0.0630596294854513
DPASPRAR	8	Unmodified	_DPASPRAR_					0	0	0			REV__ENST00000306072.9_1_15:89182098-89182164:+|nuORF	REV__ENST00000306072.9_1_15:89182098-89182164:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2512512207031	2	435.233033	868.451513	0.54442	0.00023695	-2.5636	-0.0011158	-2.0192	-0.00087881	435.2347050626983	79.545	0.51151	79.684	79.301	79.813	0.13883					41	18	3	0	0	0	0.4196	1	7526	7526		15.642	4.7763	1	83017	+		4866	24827	3339	3342	5434	5434					0.012025767806676413
DPASTQRRPKL	11	Unmodified	_DPASTQRRPKL_					0	0	0			REV__ENST00000563284.3_1_16:2141543-2142958:+|nuORF	REV__ENST00000563284.3_1_16:2141543-2142958:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.85791015625	2	634.857118	1267.69968	0.65551	0.00041615	1.5749	0.00099983	2.2304	0.001416	634.8583430041269	59.573	0.43571	60.126	59.843	60.279	0.55323					23	10	3	0	0	0	0.68177	1	6301	6301		31.634	3.0575	1	419010	+		4867	28817	3340	3343	5435	5435					0.07654080577640343
DPASTQRRPKL	11	Unmodified	_DPASTQRRPKL_					0	0	0			REV__ENST00000563284.3_1_16:2141543-2142958:+|nuORF	REV__ENST00000563284.3_1_16:2141543-2142958:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	634.857118	1267.69968	-0.76934	-0.00048842	3.82	0.0024251	3.0506	0.0019367	634.8592640627174	59.625	0.56767	60.016	59.727	60.294	0.39077	-0.054874	0.0022769	NaN	31.634	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	222500	+		4868	28817	3340	3343							0.07654080577640343
DPASTQRRPKL	11	Unmodified	_DPASTQRRPKL_					0	0	0			REV__ENST00000563284.3_1_16:2141543-2142958:+|nuORF	REV__ENST00000563284.3_1_16:2141543-2142958:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	634.857118	1267.69968	0.65551	0.00041615	1.5749	0.00099983	2.2304	0.001416	634.8583430041269	59.573	0.43571	60.126	59.843	60.279	0.55323	0.054874	-0.00057372	NaN	31.634	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	419010	+		4869	28817	3340	3343							0.07654080577640343
DPATTQSTSLI	11	Unmodified	_DPATTQSTSLI_					0	0	0			REV__ENSG00000115414|ENST00000354785|FN1	REV__ENSG00000115414|ENST00000354785|FN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.2906494140625	2	567.287868	1132.56118	-0.36402	-0.0002065	1.0881	0.00061727	0.7241	0.00041077	567.2884336656869	109.89	0.82098	109.89	109.64	110.46	0					54	33	2	0	0	0	0.62614	1	11392	11392		41.427	0.64845	1	469710	+		4870	18116	3341	3344	5436	5436					0.0002049281868039543
DPAVILKL	8	Unmodified	_DPAVILKL_					0	0	0			REV__ENSG00000162695|ENST00000357650|SLC30A7	REV__ENSG00000162695|ENST00000357650|SLC30A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801818847656	2	434.778754	867.542954	-0.14051	-6.1091E-05	3.4383	0.0014949	3.2978	0.0014338	434.7801225093181	38.257	1.3722	38.268	37.812	39.184	0.011173					116	31	4	0	0	0	0.86288	1	2568	2568		26.796	1.3459	1	2138600	+		4871	20837	3342	3345	5437	5437					0.10388447425293634
DPAVRSLR	8	Unmodified	_DPAVRSLR_					0	0	0			REV__nc|ENSG00000185133|Q15735-3|INPP5J	REV__nc|ENSG00000185133|Q15735-3|INPP5J	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26263427734375	2	457.264333	912.514114	-0.13162	-6.0186E-05	0.19173	8.7669E-05	0.060104	2.7483E-05	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.88601	1	7692	7692		34.173	0	1	1194000	+		4872	22739	3343	3346	5438	5438					0.05435722848858404
DPCVSADGSM	10	Unmodified	_DPCVSADGSM_					0	0	0			REV__ENSG00000187764|ENST00000422704|SEMA4D	REV__ENSG00000187764|ENST00000422704|SEMA4D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.1869812011719	2	491.186242	980.357932	-1.1534	-0.00056653	-0.20865	-0.00010248	-1.362	-0.00066901	491.18602985671697	74.119	0.82298	74.205	73.877	74.7	0.085907					65	36	2	0	0	0	0.86218	1	6826	6826		32.812	0.85756	1	232930	+		4873	22944	3344	3347	5439	5439					-0.13303271498944014
DPDETHAFK	9	Unmodified	_DPDETHAFK_					0	0	0		ENSG00000083457|ENST00000263087|ITGAE	ENSG00000083457|ENST00000263087|ITGAE	ENSG00000083457|ENST00000263087|ITGAE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2416381835938	2	530.240721	1058.46689	-0.033627	-1.783E-05	0.58581	0.00031062	0.55219	0.00029279	530.240968765566	111.53	2.3024	111.47	110.12	112.42	-0.059937					158	81	3	0	0	0	0.7932	1	12194	12194		23.042	0	1	182550			4874	1500	3345	3348	5440	5440					-0.06000601212804213
DPDGRALYDS	10	Unmodified	_DPDGRALYDS_					0	0	0			REV__ENST00000396846.7_1_16:3447222-3447375:-|nuORF	REV__ENST00000396846.7_1_16:3447222-3447375:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.776611328125	2	554.74891	1107.48327	-0.39357	-0.00021833	3.3128	0.0018378	2.9193	0.0016195	554.7508984044628	49.267	0.45336	49.727	49.499	49.952	0.45983					21	10	3	0	0	0	0.37624	1	4809	4809		36.447	18.122	1	463960	+		4875	26149	3346	3349	5441	5441					-0.06617520046734171
DPDNLNLPG	9	Unmodified	_DPDNLNLPG_					0	0	0			REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.72857666015625	2	477.729989	953.445425	-1.6875	-0.00080617	-1.149	-0.0005489	-2.8365	-0.0013551	477.72927840585464	97.94	1.0527	98.136	97.721	98.773	0.19585					50	23	3	0	0	0	0.67345	2	10074	10074;10085		42.396	8.2236	1	460730	+		4876	18507	3347	3350	5442;5443	5442					-0.033159862415232055
DPDNLNLPG	9	Unmodified	_DPDNLNLPG_					0	0	0			REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.72869873046875	2	477.729989	953.445425	-0.36177	-0.00017283	-3.034	-0.0014494	-3.3957	-0.0016222	477.7286664031754	95.828	1.4042	96.232	95.809	97.213	0.40451					90	33	5	0	0	0	0.28163	1	11544	11544		66.429	20.477	1	7034800	+		4877	18507	3347	3350	5444	5444					-0.033159862415232055
DPDNLNLPG	9	Unmodified	_DPDNLNLPG_					0	0	0			REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7286682128906	2	477.729989	953.445425	0.36854	0.00017606	-3.7318	-0.0017828	-3.3633	-0.0016067	477.7283055731362	97.887	2.0378	98.264	97.227	99.265	0.37679					128	49	5	0	0	0	0.58668	3	11864	11792;11826;11864		47.657	9.8458	1	10499000	+		4878	18507	3347	3350	5445;5446;5447	5447					-0.033159862415232055
DPDNLNLPG	9	Unmodified	_DPDNLNLPG_					0	0	0			REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	477.729989	953.445425	-0.099889	-4.772E-05	-2.7456	-0.0013117	-2.8455	-0.0013594	477.7285011008073	95.973	0.72344	96.039	95.63	96.353	0.06591	-0.024371	0.0010861	NaN	66.429	32	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129080	+		4879	18507	3347	3350							-0.033159862415232055
DPDNLNLPG	9	Unmodified	_DPDNLNLPG_					0	0	0			REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	477.729989	953.445425	2.0992	0.0010029	-5.3798	-0.0025701	-3.2806	-0.0015672	477.72748390920185	96.059	0.64836	96.003	95.678	96.327	-0.056381	-0.060318	-0.0014308	NaN	66.429	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121620	+		4880	18507	3347	3350							-0.033159862415232055
DPDNLNLPG	9	Unmodified	_DPDNLNLPG_					0	0	0			REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	REV__ENST00000485620.1_1_7:6851426-6854399:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	477.729989	953.445425	-0.35121	-0.00016778	-2.7931	-0.0013344	-3.1443	-0.0015022	477.72863865434164	95.85	0.77245	95.896	95.495	96.268	0.046982	-0.16664	0.0010407	NaN	66.429	31	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90679	+		4881	18507	3347	3350							-0.033159862415232055
DPEARRGP	8	Unmodified	_DPEARRGP_					0	0	0			REV__ENST00000590160.1_1_19:44529519-44531212:+|nuORF	REV__ENST00000590160.1_1_19:44529519-44531212:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.2314147949219	2	449.230491	896.446428	0.9656	0.00043378	-0.74303	-0.00033379	0.22258	9.9988E-05	449.2301030462438	83.133	5.5992	83.192	80.121	85.72	0.059158					204	132	2	0	0	0	0.884	1	8487	8487		33.516	3.0119	1	221730	+		4882	29175	3348	3351	5448	5448					-0.005937270819458718
DPEFAVYLSY	10	Unmodified	_DPEFAVYLSY_					0	0	0			REV__ENST00000361534.6_1_21:35013512-35014031:-|nuORF	REV__ENST00000361534.6_1_21:35013512-35014031:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	602.2777709960938	2	602.282054	1202.54956	-2.3357	-0.0014067	-3.0813	-0.0018558	-5.417	-0.0032626	602.2799940981067	40.289	0.70148	40.298	39.986	40.687	0.0092773					46	16	4	0	0	0	0.6116	1	2914	2914		49.442	13.823	1	842130	+		4883	25502	3349	3352	5449	5449					-0.04361704204666239
DPFCWTIEVLG	11	Unmodified	_DPFCWTIEVLG_					0	0	0			REV__ENSG00000132357|ENST00000254691|CARD6	REV__ENSG00000132357|ENST00000254691|CARD6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3585815429688	2	640.305007	1278.59546	-1.1591	-0.00074217	3.5215	0.0022548	2.3624	0.0015126	640.3071973300111	98.734	1.0049	98.93	98.244	99.248	0.19585					32	22	2	0	0	0	0.1728	1	10229	10229		24.519	5.4157	1	148650	+		4884	18996	3350	3353	5450	5450					-0.032693822940700557
DPFCWTIEVLG	11	Unmodified	_DPFCWTIEVLG_					0	0	0			REV__ENSG00000132357|ENST00000254691|CARD6	REV__ENSG00000132357|ENST00000254691|CARD6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	640.305007	1278.59546	-0.070201	-4.495E-05	1.9184	0.0012283	1.8482	0.0011834	640.3059040618651	98.714	1.3167	98.764	97.832	99.148	0.049828	-0.16389	0.00099556	NaN	24.519	40	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47949	+		4885	18996	3350	3353							-0.032693822940700557
DPFDCPKVQ	9	Unmodified	_DPFDCPKVQ_					0	0	0			REV__nc|ENSG00000116785|Q02985-2|CFHR3	REV__nc|ENSG00000116785|Q02985-2|CFHR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.2489013671875	2	524.742042	1047.46953	0.6925	0.00036338	2.9239	0.0015343	3.6164	0.0018977	524.743544278018	24.742	0.77218	24.792	24.47	25.242	0.050451					35	23	2	0	0	0	0.28163	1	954	954		66.429	16.893	1	32886	+		4886	18224	3351	3354	5451	5451					-0.052304690795153874
DPFKDIILY	9	Unmodified	_DPFKDIILY_					0	0	0		nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.3065795898438	2	562.305332	1122.59611	0.035051	1.9709E-05	0.28553	0.00016056	0.32058	0.00018026	562.305399043402	84.25	1.2874	84.686	84.172	85.46	0.43538					98	31	5	0	0	0	0.029359	4	9805	9781;9793;9805;9818		118.74	32.96	1	6203300			4887	1479	3352	3355	5452;5453;5454;5455	5454					0.03971780417282389
DPFKDIILY	9	Unmodified	_DPFKDIILY_					0	0	0		nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.3059692382812	2	562.305332	1122.59611	0.25151	0.00014143	0.31839	0.00017903	0.5699	0.00032046	562.30544290986	84.247	1.205	84.695	84.266	85.471	0.44736					97	29	5	0	0	0	0.059135	6	9851	9804;9815;9826;9838;9851;9863		104.06	18.948	1	6511800			4888	1479	3352	3355	5456;5457;5458;5459;5460;5461	5460					0.03971780417282389
DPFPDHVVF	9	Unmodified	_DPFPDHVVF_					0	0	0		ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF	ENSG00000149311|ENST00000675843|ATM	ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7583618164062	2	536.758549	1071.50255	0.16624	8.9229E-05	0.0056893	3.0538E-06	0.17193	9.2282E-05	536.7583941729528	76.896	1.0181	77.296	76.784	77.802	0.3997					75	30	3	0	0	0	0.021904	5	8739	8706;8714;8729;8739;8751		123.99	38.629	1	1832400			4889	5019	3353	3356	5462;5463;5464;5465;5466	5465					-0.030345189651598048
DPFPDHVVF	9	Unmodified	_DPFPDHVVF_					0	0	0		ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF	ENSG00000149311|ENST00000675843|ATM	ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7583618164062	2	536.758549	1071.50255	-0.49033	-0.00026319	0.69157	0.0003712	0.20124	0.00010801	536.7587435809163	76.742	1.0271	77.31	76.852	77.879	0.56836					69	30	3	0	0	0	0.043636	5	8750	8718;8724;8732;8750;8761		110.34	36.362	1	1923700			4890	5019	3353	3356	5467;5468;5469;5470;5471	5470					-0.030345189651598048
DPFPQREY	8	Unmodified	_DPFPQREY_					0	0	0			REV__ENSG00000135845|ENST00000344529|PIGC	REV__ENSG00000135845|ENST00000344529|PIGC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.7761840820312	2	526.245806	1050.47706	0.37402	0.00019683	3.9961	0.0021029	4.3701	0.0022998	526.2494036523369	63.109	0.15038	63.075	63.017	63.168	-0.033714					9	6	2	0	0	0	0.4196	1	5981	5981		42.396	15.6	1	25285	+		4891	19259	3354	3357	5472	5472					-0.04615993487573178
DPFVKAAKVE	10	Unmodified	_DPFVKAAKVE_					0	0	0		ENSG00000122687|ENST00000242257|MRM2;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;ENST00000486040.1_1_7:2278405-2281804:-|nuORF	ENSG00000122687|ENST00000242257|MRM2	ENSG00000122687|ENST00000242257|MRM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.30615234375	2	552.308406	1102.60226	0.78014	0.00043088	-4.3887	-0.0024239	-3.6085	-0.001993	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.86106	1	9369	9369		33.922	2.3918	1	1841700			4892	3239	3355	3358	5473	5473					0.05506298648788288
DPFWGRTF	8	Unmodified	_DPFWGRTF_					0	0	0			REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.2498779296875	2	513.245609	1024.47667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.684	1	27.66	27.16	28.16	-0.023556								0	0	0	0.29703	1	1276	1276		37.159	1.9584	1		+		4893	28899	3356	3359	5474	5474					-0.03459368416770303
DPGEQIFN	8	Unmodified	_DPGEQIFN_					0	0	0		nc|ENSG00000166974|Q15555-2|MAPRE2;ENSG00000166974|ENST00000300249|MAPRE2;nc|ENSG00000166974|Q15555-4|MAPRE2;nc|ENSG00000166974|Q15555-5|MAPRE2;nc|ENSG00000166974|Q15555-3|MAPRE2	nc|ENSG00000166974|Q15555-2|MAPRE2	nc|ENSG00000166974|Q15555-2|MAPRE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.2138671875	2	460.211432	918.408311	1.4166	0.00065195	3.9366	0.0018117	5.3533	0.0024636	460.21371182580657	107.11	0.79639	107.22	106.86	107.65	0.10396					90	28	5	0	0	0	0.90983	1	13088	13088		42.396	13.247	1	1570100			4894	6256	3357	3360	5475	5475					-0.054156577872845446
DPGLLHTLRR	10	Unmodified	_DPGLLHTLRR_					0	0	0			REV__ENSG00000006118|ENST00000453848|TMEM132A	REV__ENSG00000006118|ENST00000453848|TMEM132A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3430786132812	2	589.343646	1176.67274	0.71715	0.00042265	-1.4797	-0.00087205	-0.76255	-0.0004494	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.8651	1	10980	10980		25.574	0	1	2439600	+		4895	16097	3358	3361	5476	5476					0.09147016757151505
DPGPEPKL	8	Unmodified	_DPGPEPKL_					0	0	0		ENST00000539921.5_1_11:62619710-62619788:-|nuORF	ENST00000539921.5_1_11:62619710-62619788:-|nuORF	ENST00000539921.5_1_11:62619710-62619788:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3026123046875	2	426.726718	851.438883	0.010654	4.5464E-06	2.1273	0.00090777	2.1379	0.00091232	426.7270313063834	70.298	0.12163	70.845	70.762	70.883	0.54693					4	2	2	0	0	0	0.4196	1	7816	7816		26.796	13.837	1	20727			4896	13487	3359	3362	5477	5477					0.007221205977657519
DPGPVPII	8	Unmodified	_DPGPVPII_					0	0	0		nc|ENSG00000172349|Q14005-2|IL16;ENSG00000172349|ENST00000683961|IL16	nc|ENSG00000172349|Q14005-2|IL16	nc|ENSG00000172349|Q14005-2|IL16	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.574951171875	2	404.234179	806.453805	-0.18744	-7.5772E-05	-3.1815	-0.0012861	-3.3689	-0.0013618	404.2327577866721	82.438	2.1481	82.504	81.362	83.51	0.06591					99	49	3	0	0	0	0.4196	1	8102	8102		20.482	0	1	347110			4897	6765	3360	3363	5478	5478					0.04283612465758324
DPGSRPVR	8	Unmodified	_DPGSRPVR_					0	0	0		ENSG00000108556|ENST00000649488|CHRNE	ENSG00000108556|ENST00000649488|CHRNE	ENSG00000108556|ENST00000649488|CHRNE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.241455078125	2	442.240858	882.467164	0.21245	9.3954E-05	-0.1421	-6.2841E-05	0.070351	3.1112E-05	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.89962	1	9354	9354		38.806	0	1	1030200			4898	2416	3361	3364	5479	5479					0.021228632977113193
DPGTKQGP	8	Unmodified	_DPGTKQGP_					0	0	0			REV__ENST00000549913.6_1_12:113307544-113334582:+|nuORF	REV__ENST00000549913.6_1_12:113307544-113334582:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2011413574219	2	400.200867	798.387182	-0.072413	-2.898E-05	-3.5103	-0.0014048	-3.5827	-0.0014338	400.2011984622312	64.759	1.0181	65.313	64.852	65.87	0.55386					57	25	3	0	0	0	0.88944	1	7007	7007		57.811	4.4598	1	265310	+		4899	15514	3362	3365	5480	5480					-0.02007623096142197
DPHIYVCSPAQ	11	Unmodified	_DPHIYVCSPAQ_					0	0	0			REV__nc|ENSG00000164458|O15178-2|TBXT	REV__nc|ENSG00000164458|O15178-2|TBXT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	410.52362060546875	3	410.525496	1228.55466	-0.35453	-0.00014554	0.96231	0.00039505	0.60778	0.00024951	410.52573183171756	56.468	1.2873	56.439	56.212	57.499	-0.028664					114	50	3	0	0	0	0.78309	1	5164	5164		9.2118	0.5181	1	2655000	+		4900	21083	3363	3366	5481	5481					-0.05047723613688504
DPIDPPKLEL	10	Unmodified	_DPIDPPKLEL_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.8531494140625	2	568.813522	1135.61249	2.8842	0.0016406	-1.3324	-0.00075787	1.5518	0.00088271	568.8125980746324	102.33	1.295	102.29	101.53	102.83	-0.047005					43	30	2	0	0	0	0.37624	1	11229	11229		52.937	3.4952	1	413170	+		4901	20437;29946	3364	3367	5482	5482					0.05010861583377846
DPIGGHIHSY	10	Unmodified	_DPIGGHIHSY_					0	0	0		ENSG00000136286|ENST00000258787|MYO1G;nc|ENSG00000136286|B0I1T2-2|MYO1G;ENST00000483585.5_1_7:45011810-45018578:-|nuORF;ENST00000480503.5_1_7:45014700-45018578:-|nuORF;nc|ENSG00000136286|B0I1T2-3|MYO1G;nc|ENSG00000136286|B0I1T2-4|MYO1G	ENSG00000136286|ENST00000258787|MYO1G	ENSG00000136286|ENST00000258787|MYO1G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.2659301757812	2	548.26453	1094.51451	-1.6257	-0.00089129	1.3072	0.00071668	-0.31848	-0.00017461	548.265121455476	39.168	1.0976	39.536	38.843	39.94	0.36797					53	25	3	0	0	0	0.14079	3	3251	3251;3259;3280		96.19	28.889	1	550160			4902	4104	3365	3368	5483;5484;5485	5483					-0.028969022219371254
DPIGGHIHSY	10	Unmodified	_DPIGGHIHSY_					0	0	0		ENSG00000136286|ENST00000258787|MYO1G;nc|ENSG00000136286|B0I1T2-2|MYO1G;ENST00000483585.5_1_7:45011810-45018578:-|nuORF;ENST00000480503.5_1_7:45014700-45018578:-|nuORF;nc|ENSG00000136286|B0I1T2-3|MYO1G;nc|ENSG00000136286|B0I1T2-4|MYO1G	ENSG00000136286|ENST00000258787|MYO1G	ENSG00000136286|ENST00000258787|MYO1G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.2646484375	2	548.26453	1094.51451	-1.0131	-0.00055543	0.86681	0.00047524	-0.14625	-8.0183E-05	548.2648732791297	38.599	1.1431	39.121	38.79	39.934	0.52235					64	26	3	0	0	0	0.44803	1	3202	3202		60.118	8.9256	1	520760			4903	4104	3365	3368	5486	5486					-0.028969022219371254
DPIGSYVS	8	Unmodified	_DPIGSYVS_					0	0	0			REV__nc|ENSG00000134686|Q8IXK0-4|PHC2	REV__nc|ENSG00000134686|Q8IXK0-4|PHC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.18402099609375	2	419.203076	836.391599	-0.69359	-0.00029075	-3.5963	-0.0015076	-4.2899	-0.0017983	419.20195081025554	86.926	1.3196	87.38	86.815	88.135	0.45429					51	31	3	0	0	0	0.4196	1	10201	10201		18.324	0	1	353910	+		4904	19156	3366	3369	5487	5487					-0.033141586732313044
DPIQLINKLKP	11	Unmodified	_DPIQLINKLKP_					0	0	0			REV__nc|ENSG00000131781|P49326-3|FMO5	REV__nc|ENSG00000131781|P49326-3|FMO5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	427.30291748046875	3	426.930851	1277.77072	-1.7389	-0.00074237	-4.112	-0.0017555	-5.8509	-0.0024979	426.9288962942585	63.077	0.35976	63.19	62.974	63.334	0.11388					28	17	2	0	0	0	0.17586	1	5494	5494		27.644	19.237	1	96580	+		4905	29844	3367	3370	5488	5488					0.14294780562454434
DPIRRVAS	8	Unmodified	_DPIRRVAS_					0	0	0			REV__ENST00000499217.6_1_15:74753754-74753877:+|nuORF	REV__ENST00000499217.6_1_15:74753754-74753877:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2636413574219	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.89494	1	8148	8148		37.159	3.6435	1	4061400	+		4906	27798	3368	3371	5489	5489					0.05435722848858404
DPKEDIDH	8	Unmodified	_DPKEDIDH_					0	0	0			REV__ENSG00000198924|ENST00000361384|DCLRE1A	REV__ENSG00000198924|ENST00000361384|DCLRE1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.7181701660156	2	484.719621	967.42469	0.78283	0.00037946	-3.5837	-0.0017371	-2.8008	-0.0013576	484.71775432526266	100.23	1.3654	100.38	99.851	101.22	0.15073					55	31	3	0	0	0	0.884	1	10451	10451		33.516	0.70317	1	505140	+		4907	23417	3369	3372	5490	5490					-0.06032576621203134
DPKEDIDH	8	Unmodified	_DPKEDIDH_					0	0	0			REV__ENSG00000198924|ENST00000361384|DCLRE1A	REV__ENSG00000198924|ENST00000361384|DCLRE1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.718505859375	2	484.719621	967.42469	1.6171	0.00078385	-4.4441	-0.0021542	-2.827	-0.0013703	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.91005	2	11868	11868;11890		42.474	3.6683	1	7541600	+		4908	23417	3369	3372	5491;5492	5491					-0.06032576621203134
DPKEDIDH	8	Unmodified	_DPKEDIDH_					0	0	0			REV__ENSG00000198924|ENST00000361384|DCLRE1A	REV__ENSG00000198924|ENST00000361384|DCLRE1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7182312011719	2	484.719621	967.42469	1.0671	0.00051723	-3.9124	-0.0018964	-2.8453	-0.0013792	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.91005	2	11947	11923;11947		50.025	4.0726	1	7522200	+		4909	23417	3369	3372	5493;5494	5494					-0.06032576621203134
DPKPRLIKMI	10	Unmodified	_DPKPRLIKMI_					0	0	0			REV__ENST00000523351.5_1_5:169188379-169509859:+|nuORF	REV__ENST00000523351.5_1_5:169188379-169509859:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.8718872070312	2	605.870651	1209.72675	0.90131	0.00054608	1.5322	0.00092832	2.4335	0.0014744	605.871436730015	100.15	1.5268	100.3	99.851	101.38	0.15073					77	35	3	0	0	0	0.86763	1	10430	10430		26.693	0	1	806450	+		4910	19148	3370	3373	5495	5495					0.13027472864496303
DPKVPLTAM	9	Unmodified	_DPKVPLTAM_					0	0	0			REV__nc|ENSG00000178965|Q5RHP9-2|ERICH3	REV__nc|ENSG00000178965|Q5RHP9-2|ERICH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.2669982910156	2	486.265153	970.515753	1.0382	0.00050483	3.0908	0.0015029	4.1289	0.0020078	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.74721	1	8975	8975		37.159	0.13063	1	1819100	+		4911	22303	3371	3374	5496	5496					0.029315958225765826
DPLALREP	8	Unmodified	_DPLALREP_					0	0	0			REV__nc|ENSG00000149179|Q9H6J7-3|CSTPP1;REV__ENST00000532840.5_1_11:46958356-47159359:+|nuORF	REV__ENST00000532840.5_1_11:46958356-47159359:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.301025390625	2	455.753267	909.491981	-0.36472	-0.00016622	-3.1321	-0.0014275	-3.4969	-0.0015937	455.75358451816226	33.063	0.21161	33.233	33.145	33.356	0.16971					7	4	2	0	0	0	0.4196	1	2360	2360		27.882	3.3631	1	33907	+		4912	20153;28333	3372	3375	5497	5497					0.03361498380422745
DPLAPLQLLI	10	Unmodified	_DPLAPLQLLI_					0	0	0		nc|ENSG821|P63135|ERVK-7_pol;nc|ENSG851|Q9QC07|ERVK-18_pol;nc|ENSG855|P10266|ERVK-10_pol;nc|ENSG853|Q9UQG0|ERVK-11;nc|ENSG844|Q9WJR5|ERVK-19_pol;nc|ENSG826|Q9BXR3|ERVK-6_gag;nc|ENSG832|P63136|ERVK-25_pol;nc|ENSG814|P63133|ERVK-8_pol	nc|ENSG821|P63135|ERVK-7_pol	nc|ENSG821|P63135|ERVK-7_pol	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8405151367188	2	546.8368	1091.65905	1.265	0.00069175	4.2188	0.002307	5.4838	0.0029987	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.8608	1	10983	10983		34.173	0	1	39577000			4913	15361	3373	3376	5498	5498					0.11688346205346534
DPLELSVAAL	10	Unmodified	_DPLELSVAAL_					0	0	0			REV__ENSG00000023516|ENST00000025301|AKAP11	REV__ENSG00000023516|ENST00000025301|AKAP11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.285888671875	2	514.28714	1026.55973	0.17645	9.0748E-05	-0.50852	-0.00026152	-0.33206	-0.00017078	514.2867610962213	80.961	0.99719	81.017	80.6	81.597	0.055916					45	22	3	0	0	0	0.86218	2	8088	8076;8088		32.812	2.3082	1	361220	+		4914	16251	3374	3377	5499;5500	5500					0.04750903520562133
DPLKKLLEVVE	11	Unmodified	_DPLKKLLEVVE_					0	0	0			REV__nc|ENSG00000116062|P52701-4|MSH6	REV__nc|ENSG00000116062|P52701-4|MSH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8820190429688	2	641.884478	1281.7544	-1.1528	-0.00073997	-2.0452	-0.0013128	-3.198	-0.0020528	641.8829970841505	95.709	2.5048	95.911	94.329	96.834	0.20242					216	59	5	0	0	0	0.6493	1	9724	9724		38.754	2.3069	1	1922900	+		4915	18176	3375	3378	5501	5501					0.12479654605704127
DPLKKLLEVVE	11	Unmodified	_DPLKKLLEVVE_					0	0	0			REV__nc|ENSG00000116062|P52701-4|MSH6	REV__nc|ENSG00000116062|P52701-4|MSH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8828125	2	641.884478	1281.7544	-1.1529	-0.00074004	-2.0582	-0.0013212	-3.2112	-0.0020612	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.70737	1	10216	10216		30.318	5.7985	1	3521600	+		4916	18176	3375	3378	5502	5502					0.12479654605704127
DPLLPRGEW	9	Unmodified	_DPLLPRGEW_					0	0	0			REV__nc|ENSG00000124006|O75147-2|OBSL1	REV__nc|ENSG00000124006|O75147-2|OBSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.7855834960938	2	541.785099	1081.55564	-0.22268	-0.00012064	0.56378	0.00030545	0.3411	0.0001848	541.7852590351226	56.903	1.7601	56.891	56.59	58.35	-0.012203					157	62	4	0	0	0	0.78983	1	5273	5273		27.882	0	1	5602900	+		4917	18552	3376	3379	5503	5503					0.01812858817538654
DPLNQEGEQSL	11	Unmodified	_DPLNQEGEQSL_					0	0	0			REV__ENST00000536447.6_1_22:42487490-42520529:+|nuORF	REV__ENST00000536447.6_1_22:42487490-42520529:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	410.52496337890625	3	410.52633	1228.55716	-0.35453	-0.00014554	-1.0696	-0.00043909	-1.4241	-0.00058463	410.52573183171756	56.468	1.2873	56.439	56.212	57.499	-0.028664					114	50	3	0	0	0	0.78658	1	5183	5183		8.7993	0	1	2655000	+		4918	28409	3377	3380	5504	5504					-0.04797596675030036
DPLSKLVE	8	Unmodified	_DPLSKLVE_					0	0	0			REV__nc|ENSG00000144191|Q16281-2|CNGA3	REV__nc|ENSG00000144191|Q16281-2|CNGA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7543029785156	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.87422	1	8023	8023		30.318	1.1682	1	394230	+		4919	19875	3378	3381	5505	5505					0.04262962803340997
DPLTASGFHD	10	Unmodified	_DPLTASGFHD_					0	0	0			REV__ENST00000555284.1_1_14:81736911-81745120:-|nuORF	REV__ENST00000555284.1_1_14:81736911-81745120:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2404174804688	2	530.240721	1058.46689	-0.033627	-1.783E-05	0.58581	0.00031062	0.55219	0.00029279	530.240968765566	111.53	2.3024	111.47	110.12	112.42	-0.059937					158	81	3	0	0	0	0.85934	1	12173	12173		35.618	5.3006	1	182550	+		4920	19592	3379	3382	5506	5506					-0.060006012127814756
DPLTPLISKH	10	Unmodified	_DPLTPLISKH_					0	0	0		ENST00000496157.5_1_7:99775584-99786236:+|nuORF	ENST00000496157.5_1_7:99775584-99786236:+|nuORF	ENST00000496157.5_1_7:99775584-99786236:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8204956054688	2	560.821681	1119.62881	-1.1548	-0.00064764	-2.2174	-0.0012436	-3.3722	-0.0018912	560.8203192234314	92.561	2.9962	92.631	91.312	94.308	0.06987					218	70	4	0	0	0	0.86047	1	9553	9553		23.523	3.5259	1	775670			4921	12779	3380	3383	5507	5507					0.07377987540144204
DPLTTPLLI	9	Unmodified	_DPLTTPLLI_					0	0	0		nc|ENSG00000154134|Q96MS0-2|ROBO3	nc|ENSG00000154134|Q96MS0-2|ROBO3	nc|ENSG00000154134|Q96MS0-2|ROBO3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7947082519531	2	491.794601	981.574648	0.09879	4.8585E-05	2.3098	0.001136	2.4086	0.0011846	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.7932	1	4227	4227		25.45	1.2474	1	1349600			4922	15002	3381	3384	5508	5508					0.08312395388577443
DPLVKALQLL	10	Unmodified	_DPLVKALQLL_					0	0	0		ENSG00000169291|ENST00000304760|SHE	ENSG00000169291|ENST00000304760|SHE	ENSG00000169291|ENST00000304760|SHE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.3541259765625	2	555.350074	1108.6856	2.1967	0.00122	4.1632	0.0023121	6.36	0.003532	555.3522704950425	100.68	0.92799	101.03	100.57	101.5	0.3459					69	22	4	0	0	0	0.74274	1	12280	12280		42.396	0	1	1353700			4923	6485	3382	3385	5509	5509					0.13560035096679712
DPMDDCSSCT	10	Unmodified	_DPMDDCSSCT_					0	0	0		ENSG00000151474|ENST00000357447|FRMD4A	ENSG00000151474|ENST00000357447|FRMD4A	ENSG00000151474|ENST00000357447|FRMD4A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.6660766601562	2	537.16465	1072.31475	-0.48517	-0.00026062	0.62593	0.00033623	0.14076	7.5613E-05	537.6653480678389	75.151	0.68248	75.716	75.456	76.138	0.56458					68	16	5	0	0	0	0.37624	1	8557	8557		19.997	13.684	1	1124900			4924	5120	3383	3386	5510	5510					-0.21851829338561402
DPNFLVTGKL	10	Unmodified	_DPNFLVTGKL_					0	0	0			REV__ENSG00000169297|ENST00000378970|NR0B1	REV__ENSG00000169297|ENST00000378970|NR0B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3065795898438	2	552.308406	1102.60226	-0.59209	-0.00032702	-2.8479	-0.0015729	-3.44	-0.0018999	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.85981	1	9138	9138		35.152	2.3396	1	1102700	+		4925	21568	3384	3387	5511	5511					0.055062986488110255
DPNIVDVYGN	10	Unmodified	_DPNIVDVYGN_					0	0	0		nc|ENSG00000163046|A7E2S9-2|ANKRD30BL;ENSG00000163046|ENST00000409867|ANKRD30BL	nc|ENSG00000163046|A7E2S9-2|ANKRD30BL	nc|ENSG00000163046|A7E2S9-2|ANKRD30BL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.3326416015625	2	553.261653	1104.50875	0.75495	0.00041769	3.1422	0.0017385	3.8972	0.0021562	553.2632534886856	96.645	0.66742	97.049	96.75	97.417	0.40451					24	15	2	0	0	0	0.37624	1	11672	11672		33.922	1.1092	1	262950			4926	5759	3385	3388	5512	5512					-0.03932045524265959
DPNLAFLRFV	10	Unmodified	_DPNLAFLRFV_					0	0	0		ENSG00000197943|ENST00000564138|PLCG2	ENSG00000197943|ENST00000564138|PLCG2	ENSG00000197943|ENST00000564138|PLCG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.3325805664062	2	596.329673	1190.64479	2.639	0.0015737	2.6396	0.001574	5.2785	0.0031477	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.86218	1	10297	10297		32.812	2.4947	1	1305600			4927	8216	3386	3389	5513	5513					0.05709693777043867
DPNLAFLRFV	10	Unmodified	_DPNLAFLRFV_					0	0	0		ENSG00000197943|ENST00000564138|PLCG2	ENSG00000197943|ENST00000564138|PLCG2	ENSG00000197943|ENST00000564138|PLCG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.3335571289062	2	596.329673	1190.64479	0.92115	0.00054931	4.4733	0.0026676	5.3945	0.0032169	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.86587	1	9946	9946		29.17	1.2878	1	1402200			4928	8216	3386	3389	5514	5514					0.05709693777043867
DPNLEFVAM	9	Oxidation (M)	_DPNLEFVAM(Oxidation (M))_		DPNLEFVAM(1)		DPNLEFVAM(61)	0	0	1		ENST00000455094.1_1_6:30454046-30454364:+|nuORF;ENSG00000132341|ENST00000543796|RAN	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2410888671875	2	526.241875	1050.4692	0.18829	9.9087E-05	-0.58617	-0.00030847	-0.39788	-0.00020938	526.2412314877313	74.357	2.6099	74.748	74.081	76.691	0.3911					105	62	3	0	0	0	0.35373	1	8346	8346		60.972	8.0352	1	679770			4929	3784	3387	3390	5515	5515		68			-0.05401888799360677
DPNLEFVAM	9	Oxidation (M)	_DPNLEFVAM(Oxidation (M))_		DPNLEFVAM(1)		DPNLEFVAM(72)	0	0	1		ENST00000455094.1_1_6:30454046-30454364:+|nuORF;ENSG00000132341|ENST00000543796|RAN	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2420043945312	2	526.241875	1050.4692	0.18236	9.5965E-05	-0.36906	-0.00019422	-0.1867	-9.825E-05	526.2413883520911	74.228	1.2939	74.787	74.326	75.62	0.55891					65	30	3	0	0	0	0.21969	2	8411	8375;8411		71.877	7.6702	1	666510			4930	3784	3387	3390	5516;5517	5517		68			-0.05401888799360677
DPNQFIGEEV	10	Unmodified	_DPNQFIGEEV_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000025008	REV__CON__ENSEMBL:ENSBTAP00000025008	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.2691040039062	2	574.266936	1146.51932	0.84087	0.00048288	-0.27906	-0.00016026	0.5618	0.00032262	574.2666801981707	96.876	5.0715	97.039	94.33	99.401	0.16316					175	119	3	0	0	0	0.80179	1	10150	10150		39.253	5.7372	1	185070	+	+	4931	15965	3388	3391	5518	5518					-0.04808062869847163
DPNRPIARPSL	11	Unmodified	_DPNRPIARPSL_					0	0	0			REV__ENSG00000088888|ENST00000428216|MAVS	REV__ENSG00000088888|ENST00000428216|MAVS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	618.3461303710938	2	618.346386	1234.67822	-1.2296	-0.00076029	0.47164	0.00029164	-0.75792	-0.00046865	618.3465539597456	97.787	3.3462	97.982	96.915	100.26	0.19585					219	77	4	0	0	0	0.68532	1	10168	10168		33.922	1.1092	1	806570	+		4932	16952	3389	3392	5519	5519					0.07026695548938733
DPNVLLICH	9	Unmodified	_DPNVLLICH_					0	0	0			REV__ENSG00000166816|ENST00000450168|LDHD	REV__ENSG00000166816|ENST00000450168|LDHD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.2697143554688	2	512.268227	1022.5219	4.8773	0.0024985	0.28155	0.00014423	5.1589	0.0026427	512.2679964843359	106.96	1.075	107.11	106.6	107.68	0.14929					66	41	3	0	0	0	0.74721	1	13046	13046		37.159	0	1	226660	+		4933	21323	3390	3393	5520	5520					0.011541140541112327
DPPAAGAGHPQ	11	Unmodified	_DPPAAGAGHPQ_					0	0	0		ENST00000270502.6_1_19:11039810-11040236:+|nuORF	ENST00000270502.6_1_19:11039810-11040236:+|nuORF	ENST00000270502.6_1_19:11039810-11040236:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2388610839844	2	509.241055	1016.46756	-0.12162	-6.1934E-05	-0.55782	-0.00028406	-0.67944	-0.000346	509.2406534616815	38.33	2.3682	38.852	38.473	40.841	0.52236					103	56	2	0	0	0	0.60058	1	3353	3353		44.377	5.571	1	906030			4934	9555	3391	3394	5521	5521					-0.04001761773088219
DPPLYELISAQ	11	Unmodified	_DPPLYELISAQ_					0	0	0			REV__ENSG00000116198|ENST00000378230|CEP104	REV__ENSG00000116198|ENST00000378230|CEP104	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.3211669921875	2	623.321711	1244.62887	-0.74016	-0.00046135	1.5822	0.00098625	0.84209	0.00052489	623.3225358169732	57.039	0.54884	57.039	56.823	57.372	0					53	23	3	0	0	0	0.31977	1	4876	4876		70.816	10.698	1	309880	+		4935	18188	3392	3395	5522	5522					0.016339427494813208
DPPPRRDRRRE	11	Unmodified	_DPPPRRDRRRE_					0	0	0			REV__ENST00000556433.5_1_14:69445007-69445439:-|nuORF	REV__ENST00000556433.5_1_14:69445007-69445439:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.92901611328125	3	483.930907	1448.77089	-0.87151	-0.00042175	-1.8954	-0.00091724	-2.7669	-0.001339	483.92996305305127	26.737	0.71714	26.803	26.419	27.136	0.066875					82	33	3	0	0	0	0.72374	1	1021	1021		27.644	2.5179	1	283730	+		4936	28699	3393	3396	5523	5523					0.06445593335024569
DPQEDPDIT	9	Unmodified	_DPQEDPDIT_					0	0	0		ENST00000505076.1_1_11:48967299-48973146:+|nuORF	ENST00000505076.1_1_11:48967299-48973146:+|nuORF	ENST00000505076.1_1_11:48967299-48973146:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8181762695312	2	515.222194	1028.42983	1.8421	0.00094908	-0.15179	-7.8204E-05	1.6903	0.00087088	515.221702298149	24.29	0.60406	23.776	23.408	24.012	-0.51365					17	13	2	0	0	0	0.20789	1	1138	1138		32.812	21.947	1	35443			4937	12917	3394	3397	5524	5524					-0.0832431754922709
DPQEDPDIT	9	Unmodified	_DPQEDPDIT_					0	0	0		ENST00000505076.1_1_11:48967299-48973146:+|nuORF	ENST00000505076.1_1_11:48967299-48973146:+|nuORF	ENST00000505076.1_1_11:48967299-48973146:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	515.222194	1028.42983	-0.41291	-0.00021274	4.4497	0.0022926	4.0368	0.0020798	515.7241046471097	24.045	0.061131	24.103	24.06	24.121	0.058167	0.16354	0.00013918	NaN	32.812	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12711			4938	12917	3394	3397							-0.0832431754922709
DPQMRLKLF	9	Unmodified	_DPQMRLKLF_					0	0	0		nc|ENSG00000164818|Q86Y56-2|DNAAF5;ENSG00000164818|ENST00000297440|DNAAF5;ENST00000491496.1_1_7:803580-810256:+|nuORF	nc|ENSG00000164818|Q86Y56-2|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3193969726562	2	574.318251	1146.62195	-1.0331	-0.00059332	3.0688	0.0017625	2.0358	0.0011692	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.74721	1	9816	9816		37.159	2.9866	1	1380900			4939	6006	3395	3398	5525	5525					0.05450351387889896
DPRLARRFL	9	Unmodified	_DPRLARRFL_					0	0	0			REV__ENSG00000185905|ENST00000329410|C16orf54	REV__ENSG00000185905|ENST00000329410|C16orf54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	572.3399658203125	2	572.340907	1142.66726	-1.3795	-0.00078952	-0.22039	-0.00012614	-1.5998	-0.00091566	572.3408207070221	101.5	0.80199	101.66	101.28	102.08	0.15505					42	19	3	0	0	0	0.58668	1	10588	10588		47.657	4.7931	1	345060	+		4940	22803	3396	3399	5526	5526					0.10163337965332175
DPRLARRFL	9	Unmodified	_DPRLARRFL_					0	0	0			REV__ENSG00000185905|ENST00000329410|C16orf54	REV__ENSG00000185905|ENST00000329410|C16orf54	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	572.340907	1142.66726	-0.35528	-0.00020334	-0.74436	-0.00042603	-1.0996	-0.00062937	572.3403907523227	101.89	0.94362	101.89	101.45	102.39	0	0.28173	0.0011895	NaN	47.657	40	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	249100	+		4941	22803	3396	3399							0.10163337965332175
DPRLARRFL	9	Unmodified	_DPRLARRFL_					0	0	0			REV__ENSG00000185905|ENST00000329410|C16orf54	REV__ENSG00000185905|ENST00000329410|C16orf54	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	572.340907	1142.66726	0.5725	0.00032767	-2.0691	-0.0011842	-1.4966	-0.00085657	572.3396541914032	101.39	0.82917	101.6	101.2	102.03	0.2058	-0.0089685	-0.00032697	NaN	47.657	35	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	407040	+		4942	22803	3396	3399							0.10163337965332175
DPRLARRFL	9	Unmodified	_DPRLARRFL_					0	0	0			REV__ENSG00000185905|ENST00000329410|C16orf54	REV__ENSG00000185905|ENST00000329410|C16orf54	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	572.340907	1142.66726	0.87335	0.00049985	-1.4784	-0.00084615	-0.60505	-0.0003463	572.3395530255622	101.42	0.82366	101.56	101.29	102.11	0.14352	-0.041839	0.00034921	NaN	47.657	44	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	286080	+		4943	22803	3396	3399							0.10163337965332175
DPRLARRFL	9	Unmodified	_DPRLARRFL_					0	0	0			REV__ENSG00000185905|ENST00000329410|C16orf54	REV__ENSG00000185905|ENST00000329410|C16orf54	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	572.340907	1142.66726	1.4245	0.00081532	-3.1793	-0.0018197	-1.7548	-0.0010043	572.3392329646668	101.11	0.3093	101.41	101.13	101.44	0.2999	-0.19889	-0.0015978	NaN	47.657	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	273690	+		4944	22803	3396	3399							0.10163337965332175
DPRLARRFL	9	Unmodified	_DPRLARRFL_					0	0	0			REV__ENSG00000185905|ENST00000329410|C16orf54	REV__ENSG00000185905|ENST00000329410|C16orf54	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	572.340907	1142.66726	2.6439	0.0015132	-4.0039	-0.0022916	-1.36	-0.00077841	572.3383999975811	101.06	0.2488	101.38	101.2	101.44	0.32511	-0.2251	-0.0025417	NaN	47.657	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99569	+		4945	22803	3396	3399							0.10163337965332175
DPRLRLVCW	9	Unmodified	_DPRLRLVCW_					0	0	0			REV__ENST00000479668.5_1_7:150070169-150070337:+|nuORF	REV__ENST00000479668.5_1_7:150070169-150070337:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.3134155273438	2	579.316043	1156.61753	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.68	1	110.73	110.23	111.23	0.054062								0	0	0	0.30053	1	13394	13394		30.504	1.3336	1		+		4946	27402	3397	3400	5527	5527					0.04548886964994381
DPRRRRRRRRP	11	Unmodified	_DPRRRRRRRRP_					0	0	0		chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3253173828125	3	526.324584	1575.95192	1.2417	0.00065353	0.11543	6.0751E-05	1.3571	0.00071429	526.3245218728347	107.88	0.23429	107.92	107.74	107.97	0.035622					20	5	5	0	0	0	0.84494	1	11865	11865		6.3209	0.90796	1	66235000			4947	217	3398	3401	5528	5528					0.18698576222232077
DPRRRRRRRRP	11	Unmodified	_DPRRRRRRRRP_					0	0	0		chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.6600952148438	3	526.324584	1575.95192	-0.10918	-5.7462E-05	1.5967	0.00084039	1.4875	0.00078293	526.3253457782059	108.92	1.0597	109.05	108.28	109.34	0.13026					52	28	2	0	0	0	0.8498	1	11693	11693		6.001	0.30226	1	2107400			4948	217	3398	3401	5529	5529					0.18698576222232077
DPRRRRRRRRP	11	Unmodified	_DPRRRRRRRRP_					0	0	0		chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	526.324584	1575.95192	0.82842	0.00043602	0.74328	0.0003912	1.5717	0.00082722	526.3248886899916	108.93	1.1269	109.01	108.24	109.37	0.078552	-0.052176	-0.0009123	NaN	6.001	109	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1486700			4949	217	3398	3401							0.18698576222232077
DPRRRRRRRRP	11	Unmodified	_DPRRRRRRRRP_					0	0	0		chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	chr17:18673055-18680741|53|17.51|0.79|4.47|-|1|FOXO3B,ZNF286B|1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	526.324584	1575.95192	-1.5293	-0.00080491	3.0748	0.0016184	1.5455	0.00081345	526.3261019230473	109.11	0.58746	109.13	108.67	109.26	0.020569	0.062368	0.0027692	NaN	6.001	42	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1164200			4950	217	3398	3401							0.18698576222232077
DPRWLLPVTP	10	Unmodified	_DPRWLLPVTP_					0	0	0		ENSG00000167077|ENST00000401548|MEI1;nc|ENSG00000167077|Q5TIA1-6|MEI1;nc|ENSG00000167077|Q5TIA1-4|MEI1	ENSG00000167077|ENST00000401548|MEI1	ENSG00000167077|ENST00000401548|MEI1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.85595703125	2	597.337498	1192.66044	0.92858	0.00055467	-3.9154	-0.0023388	-2.9869	-0.0017842	597.335345847382	94.479	0.61915	94.708	94.566	95.185	0.22863					21	14	2	0	0	0	0.37624	1	9709	9709		31.53	0	1	242850			4951	6264	3399	3402	5530	5530					0.07181980294103596
DPSAMNQSIP	10	Unmodified	_DPSAMNQSIP_					0	0	0		ENST00000488569.5_1_7:128577991-128586617:+|nuORF	ENST00000488569.5_1_7:128577991-128586617:+|nuORF	ENST00000488569.5_1_7:128577991-128586617:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2410278320312	2	530.242406	1058.47026	-0.033627	-1.783E-05	-2.5928	-0.0013748	-2.6264	-0.0013926	530.240968765566	111.53	2.3024	111.47	110.12	112.42	-0.059937					158	81	3	0	0	0	0.80179	1	12144	12144		39.253	5.0803	1	182550			4952	12634	3400	3403	5531	5531					-0.05663674430456922
DPSAQFHYL	9	Unmodified	_DPSAQFHYL_					0	0	0		ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.1996459960938	2	539.253631	1076.49271	0.5554	0.0002995	-3.9856	-0.0021492	-3.4302	-0.0018497	539.2514927514161	33.263	0.42303	33.475	33.313	33.736	0.21168					16	9	3	0	0	0	0.20789	1	2431	2431		17.365	0	1	108430			4953	9022	3401	3404	5532	5532					-0.04247706970522813
DPSASAPPDS	10	Unmodified	_DPSASAPPDS_					0	0	0			REV__chr11:68441340-68446436|13|12.92|0.8|4.01|+|2|TE_info:AluJr,AluJr_dup52550,Alu,SINE,donor,-,68441068,68441340|None,LRP5|3	REV__chr11:68441340-68446436|13|12.92|0.8|4.01|+|2|TE_info:AluJr,AluJr_dup52550,Alu,SINE,donor,-,68441068,68441340|None,LRP5|3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2874755859375	2	472.203804	942.393055	2.0217	0.00095467	1.1797	0.00055707	3.2015	0.0015117	472.20418137732304	95.465	0.24639	95.408	95.347	95.593	-0.057526					6	5	2	0	0	0	0.37624	1	10216	10216		40.778	21.418	1	47665	+		4954	15504	3402	3405	5533	5533					-0.08044569375147148
DPSAWPLR	8	Unmodified	_DPSAWPLR_					0	0	0			REV__ENST00000600178.5_1_19:39307593-39308076:-|nuORF	REV__ENST00000600178.5_1_19:39307593-39308076:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	471.2414855957031	2	471.245609	940.476666	-1.6339	-0.00076995	-2.1185	-0.00099833	-3.7523	-0.0017683	471.24439943443156	85.663	2.966	85.821	84.632	87.598	0.15851					150	68	3	0	0	0	0.86288	1	8353	8353		26.796	2.5934	1	239090	+		4955	29309	3403	3406	5534	5534					0.0040463158322836534
DPSDKLAEIP	10	Unmodified	_DPSDKLAEIP_					0	0	0			REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	542.7796630859375	2	542.779679	1083.5448	-0.20343	-0.00011042	0.21327	0.00011576	0.0098399	5.3409E-06	542.7796400144206	34.431	0.88705	34.427	34.044	34.931	-0.0047417					51	21	4	0	0	0	0.70553	1	2077	2077		44.377	1.981	1	360540	+		4956	20880	3404	3407	5535	5535					0.0063741165256487875
DPSGLCPL	8	Unmodified	_DPSGLCPL_					0	0	0		nc|ENSG00000162576|Q9BRK3-2|MXRA8;ENST00000474033.5_1_1:1288683-1288722:-|nuORF	nc|ENSG00000162576|Q9BRK3-2|MXRA8	nc|ENSG00000162576|Q9BRK3-2|MXRA8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	401.1929931640625	2	401.194196	800.37384	-1.2617	-0.00050619	-1.7284	-0.00069341	-2.9901	-0.0011996	401.193516495884	82.58	1.097	82.58	82.077	83.174	0					52	26	3	0	0	0	0.90024	1	7718	7718		39.021	5.5059	1	110510			4957	15045	3405	3408	5536	5536					-0.03433197199740334
DPSKQELK	8	Unmodified	_DPSKQELK_					0	0	0			REV__ENSG00000169740|ENST00000374433|ZNF32	REV__ENSG00000169740|ENST00000374433|ZNF32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.75579833984375	2	472.756007	943.497461	-0.28077	-0.00013274	0.4154	0.00019638	0.13463	6.3647E-05	472.7560511356496	25.548	0.77612	25.507	25.111	25.888	-0.04117					46	21	3	0	0	0	0.90837	1	1072	1072		56.721	12.344	1	114310	+		4958	21600	3406	3409	5537	5537					0.023451771722307058
DPSSGLGKLA	10	Unmodified	_DPSSGLGKLA_					0	0	0			REV__nc|ENSG00000080189|Q9NQQ7-2|SLC35C2	REV__nc|ENSG00000080189|Q9NQQ7-2|SLC35C2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7555236816406	2	472.756007	943.497461	-0.42571	-0.00020126	0.70012	0.00033099	0.27441	0.00012973	472.756162330355	25.453	0.69131	25.416	25.118	25.81	-0.037176					45	20	3	0	0	0	0.82886	1	1025	1025		37.812	4.2959	1	115270	+		4959	16796	3407	3410	5538	5538					0.023451771722307058
DPTLPPCT	8	Unmodified	_DPTLPPCT_					0	0	0			REV__ENST00000517543.1_1_8:4645759-4645930:+|nuORF	REV__ENST00000517543.1_1_8:4645759-4645930:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.1998596191406	2	422.199479	842.384405	-0.033932	-1.4326E-05	-1.7909	-0.00075611	-1.8248	-0.00077043	422.19882034448597	84.27	3.1417	84.705	82.967	86.108	0.43538					155	76	3	0	0	0	0.87922	1	9807	9807		31.955	7.7521	1	930850	+		4960	28047	3408	3411	5539	5539					-0.04309214545298801
DPTTLFLLTI	10	Unmodified	_DPTTLFLLTI_					0	0	0			REV__nc|ENSG00000188467|Q71RS6-2|SLC24A5	REV__nc|ENSG00000188467|Q71RS6-2|SLC24A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3295288085938	2	567.326265	1132.63798	1.8589	0.0010546	4.3547	0.0024705	6.2136	0.0035251	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.8608	2	9886	9886;9898		34.173	3.6689	1	15439000	+		4961	23003	3409	3412	5540;5541	5540					0.07696336105800583
DPVALRVM	8	Unmodified	_DPVALRVM_					0	0	0			REV__ENSG00000214872|ENST00000527972|SMTNL1	REV__ENSG00000214872|ENST00000527972|SMTNL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.75439453125	2	450.752213	899.489873	0.5597	0.00025229	3.7702	0.0016994	4.3299	0.0019517	450.7538239580323	79.562	2.1146	79.701	78.151	80.265	0.13883					102	73	2	0	0	0	0.86288	1	7534	7534		26.796	2.5934	1	128600	+		4962	23667	3410	3413	5542	5542					0.0361074637096408
DPVAPGRMD	9	Unmodified	_DPVAPGRMD_					0	0	0		ENSG00000169258|ENST00000303991|GPRIN1;nc|ENSG00000169258|Q7Z2K8-2|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2779541015625	2	479.226559	956.438566	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.981	1	15.897	15.397	16.397	-0.083363								0	0	0	0.30778	1	98	98		27.882	1.0861	1				4963	6483	3411	3414	5543	5543					-0.041396223937454124
DPVAPGRMD	9	Unmodified	_DPVAPGRMD_					0	0	0		ENSG00000169258|ENST00000303991|GPRIN1;nc|ENSG00000169258|Q7Z2K8-2|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2776794433594	2	479.226559	956.438566	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.165	1	16.082	15.582	16.582	-0.083363								0	0	0	0.31117	1	114	114		26.693	1.1189	1				4964	6483	3411	3414	5544	5544					-0.041396223937454124
DPVGLPLP	8	Unmodified	_DPVGLPLP_					0	0	0			REV__ENST00000492361.1_1_1:12227075-12267074:+|nuORF	REV__ENST00000492361.1_1_1:12227075-12267074:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.23175048828125	2	404.234179	806.453805	-0.18723	-7.5686E-05	-2.7376	-0.0011067	-2.9249	-0.0011823	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.89457	1	8401	8401		37.028	8.7742	1	4185000	+		4965	16266	3412	3415	5545	5545					0.04283612465758324
DPVLEVTK	8	Unmodified	_DPVLEVTK_					0	0	0		ENSG00000170160|ENST00000399273|CCDC144A	ENSG00000170160|ENST00000399273|CCDC144A	ENSG00000170160|ENST00000399273|CCDC144A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7545471191406	2	450.755475	899.496398	-0.14135	-6.3713E-05	-2.6678	-0.0012025	-2.8092	-0.0012662	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.89043	2	8026	8026;8163		35.618	6.4687	1	337080			4966	6564	3413	3416	5546;5547	5546					0.042629628033296285
DPVLEVTK	8	Unmodified	_DPVLEVTK_					0	0	0		ENSG00000170160|ENST00000399273|CCDC144A	ENSG00000170160|ENST00000399273|CCDC144A	ENSG00000170160|ENST00000399273|CCDC144A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.75714111328125	2	450.755475	899.496398	-1.264	-0.00056978	-1.5875	-0.00071559	-2.8516	-0.0012854	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.89043	1	7854	7854		35.618	3.6634	1	414240			4967	6564	3413	3416	5548	5548					0.042629628033296285
DPVLEVTK	8	Unmodified	_DPVLEVTK_					0	0	0		ENSG00000170160|ENST00000399273|CCDC144A	ENSG00000170160|ENST00000399273|CCDC144A	ENSG00000170160|ENST00000399273|CCDC144A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7563781738281	2	450.755475	899.496398	0.58167	0.00026219	-3.5127	-0.0015834	-2.9311	-0.0013212	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.89962	1	7885	7885		38.806	1.647	1	285810			4968	6564	3413	3416	5549	5549					0.042629628033296285
DPVLEVTK	8	Unmodified	_DPVLEVTK_					0	0	0		ENSG00000170160|ENST00000399273|CCDC144A	ENSG00000170160|ENST00000399273|CCDC144A	ENSG00000170160|ENST00000399273|CCDC144A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7555236816406	2	450.755475	899.496398	-1.5537	-0.00070033	-1.298	-0.00058508	-2.8517	-0.0012854	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.86677	1	7905	7905		27.882	0	1	298090			4969	6564	3413	3416	5550	5550					0.042629628033296285
DPVLFRKN	8	Unmodified	_DPVLFRKN_					0	0	0			REV__ENST00000441072.3_1_12:75057561-75057783:-|nuORF	REV__ENST00000441072.3_1_12:75057561-75057783:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7804260253906	2	494.782359	987.550165	-0.074951	-3.7084E-05	-3.8536	-0.0019067	-3.9285	-0.0019438	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.90465	1	8833	8833		40.573	1.7665	1	651380	+		4970	26748	3414	3417	5551	5551					0.0558918002569726
DPVLRQIKTPV	11	Unmodified	_DPVLRQIKTPV_					0	0	0		ENST00000504432.5_2_4:99830936-99831074:-|nuORF	ENST00000504432.5_2_4:99830936-99831074:-|nuORF	ENST00000504432.5_2_4:99830936-99831074:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.9266662597656	3	422.590717	1264.75032	1.1648	0.00049224	3.2597	0.0013775	4.4245	0.0018698	422.5921738900282	60.838	0.56422	60.869	60.43	60.994	0.0312					33	17	3	0	0	0	0.77511	1	5663	5663		16.53	1.751	1	55860			4971	12903	3415	3418	5552	5552					0.12853609902640528
DPVLRQIKTPV	11	Unmodified	_DPVLRQIKTPV_					0	0	0		ENST00000504432.5_2_4:99830936-99831074:-|nuORF	ENST00000504432.5_2_4:99830936-99831074:-|nuORF	ENST00000504432.5_2_4:99830936-99831074:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	422.590717	1264.75032	-1.802	-0.00076151	6.8077	0.0028769	5.0057	0.0021153	422.5934414713081	60.471	0.64102	60.572	60.373	61.014	0.10082	-0.23177	0.0018557	NaN	16.53	42	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	145930			4972	12903	3415	3418							0.12853609902640528
DPVLRQIKTPV	11	Unmodified	_DPVLRQIKTPV_					0	0	0		ENST00000504432.5_2_4:99830936-99831074:-|nuORF	ENST00000504432.5_2_4:99830936-99831074:-|nuORF	ENST00000504432.5_2_4:99830936-99831074:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	422.590717	1264.75032	0.37348	0.00015783	5.1627	0.0021817	5.5361	0.0023395	422.592676656622	60.769	0.39022	60.886	60.687	61.077	0.11676	0.082941	-0.00022978	NaN	16.53	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101770			4973	12903	3415	3418							0.12853609902640528
DPVLRQIKTPV	11	Unmodified	_DPVLRQIKTPV_					0	0	0		ENST00000504432.5_2_4:99830936-99831074:-|nuORF	ENST00000504432.5_2_4:99830936-99831074:-|nuORF	ENST00000504432.5_2_4:99830936-99831074:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	422.590717	1264.75032	-0.91211	-0.00038545	5.9336	0.0025075	5.0215	0.002122	422.59314194152034	60.878	0.44956	60.887	60.617	61.066	0.0081177	0.083226	0.00074763	NaN	16.53	24	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99623			4974	12903	3415	3418							0.12853609902640528
DPVLYYQLP	9	Unmodified	_DPVLYYQLP_					0	0	0			REV__nc|ENSG00000119335|Q01105|SET;REV__ENSG00000230667|ENST00000596516|SETSIP	REV__nc|ENSG00000119335|Q01105|SET	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.7892456054688	2	554.289682	1106.56481	-0.53856	-0.00029852	-3.4861	-0.0019323	-4.0246	-0.0022308	554.2876480394447	59.978	1.0198	60.01	59.603	60.623	0.032822					78	26	4	0	0	0	0.58151	1	5628	5628		47.916	3.5384	1	1883900	+		4975	29807;23757	3416	3419	5553	5553					0.01579207383178982
DPVPQSGASP	10	Unmodified	_DPVPQSGASP_					0	0	0			REV__nc|ENSG00000130768|Q92485-2|SMPDL3B	REV__nc|ENSG00000130768|Q92485-2|SMPDL3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.728515625	2	477.729989	953.445425	-0.83237	-0.00039765	-1.8574	-0.00088733	-2.6898	-0.001285	477.728935327791	97.786	0.95603	98.014	97.569	98.525	0.22788					49	21	3	0	0	0	0.80179	1	10116	10116		39.253	2.8061	1	466620	+		4976	18905	3417	3420	5554	5554					-0.03315986241511837
DPWLAHTAVLL	11	Unmodified	_DPWLAHTAVLL_					0	0	0			REV__ENSG00000180758|ENST00000377411|GPR157	REV__ENSG00000180758|ENST00000377411|GPR157	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.345947265625	2	618.342781	1234.67101	2.5351	0.0015676	2.4621	0.0015224	4.9972	0.00309	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.7342	1	10517	10517		25.574	2.0514	1	980120	+		4977	22414	3418	3421	5555	5555					0.06305962948522392
DPYSLPRVN	9	Unmodified	_DPYSLPRVN_					0	0	0			REV__ENSG00000115963|ENST00000263895|RND3	REV__ENSG00000115963|ENST00000263895|RND3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7843627929688	2	530.774731	1059.53491	0.41889	0.00022234	0.13621	7.2299E-05	0.55511	0.00029464	530.7757907205375	52.913	0.82532	53.333	52.803	53.629	0.42008					40	19	3	0	0	0	0.20789	1	5344	5344		26.693	3.1702	1	175270	+		4978	18164	3419	3422	5556	5556					0.0075226843787277176
DQADNLNNV	9	Unmodified	_DQADNLNNV_					0	0	0			REV__nc|ENSG00000147852|P98155-2|VLDLR	REV__nc|ENSG00000147852|P98155-2|VLDLR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7743835449219	2	501.727978	1001.4414	0.73402	0.00036828	2.9992	0.0015048	3.7332	0.001873	501.72923579305973	49.087	0.48844	49.991	49.765	50.253	0.90424					19	11	2	0	0	0	0.20789	1	4763	4763		51.193	16.041	1	408550	+		4979	20087	3420	3423	5557	5557					-0.059260757352490145
DQAPEARKH	9	Unmodified	_DQAPEARKH_					0	0	0			REV__chr19:58557157-58557571|17|46.88|0.06|9.68|-|1|UBE2M,None|2	REV__chr19:58557157-58557571|17|46.88|0.06|9.68|-|1|UBE2M,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2682495117188	2	526.267604	1050.52066	1.1618	0.00061142	-2.5454	-0.0013395	-1.3836	-0.00072812	526.2662101994201	23.388	0.56042	22.814	22.575	23.136	-0.57415					27	12	3	0	0	0	0.64555	1	1055	1055		44.377	1.5129	1	259670	+		4980	15727	3421	3424	5558	5558					-0.0025838399044459948
DQAQAWVQ	8	Unmodified	_DQAQAWVQ_					0	0	0		ENST00000490563.5_1_1:44457877-44459596:+|nuORF;ENST00000486064.5_1_1:44457112-44459637:+|nuORF;nc|ENSG00000159214|Q8N4L8-2|CCDC24;ENSG00000159214|ENST00000372318|CCDC24	ENST00000490563.5_1_1:44457877-44459596:+|nuORF	ENST00000490563.5_1_1:44457877-44459596:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.27197265625	2	473.224874	944.435195	-0.88914	-0.00042076	0.83813	0.00039662	-0.05101	-2.4139E-05	473.22519446131764	30.379	0.79753	30.408	30.096	30.894	0.028618					21	17	2	0	0	0	0.4196	1	1973	1973		19.997	0	1	41485			4981	5517	3422	3425	5559	5559					-0.0392454917609939
DQAQAWVQ	8	Unmodified	_DQAQAWVQ_					0	0	0		ENST00000490563.5_1_1:44457877-44459596:+|nuORF;ENST00000486064.5_1_1:44457112-44459637:+|nuORF;nc|ENSG00000159214|Q8N4L8-2|CCDC24;ENSG00000159214|ENST00000372318|CCDC24	ENST00000490563.5_1_1:44457877-44459596:+|nuORF	ENST00000490563.5_1_1:44457877-44459596:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	473.224874	944.435195	-0.68157	-0.00032254	-0.075785	-3.5863E-05	-0.75736	-0.0003584	473.22481445672094	30.378	0.52458	30.382	30.185	30.71	0.0037212	-0.013044	-0.00057207	NaN	23.523	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69388			4982	5517	3422	3425							-0.0392454917609939
DQATEPGRR	9	Unmodified	_DQATEPGRR_					0	0	0		ENST00000367384.6_1_6:150070602-150070716:+|nuORF	ENST00000367384.6_1_6:150070602-150070716:+|nuORF	ENST00000367384.6_1_6:150070602-150070716:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.2597045898438	2	515.257237	1028.49992	0.17955	9.2515E-05	3.9209	0.0020203	4.1004	0.0021128	515.2590970344206	30.802	0.50757	30.792	30.585	31.093	-0.010656					23	12	2	0	0	0	0.7932	1	1666	1666		25.574	1.3713	1	53048			4983	10543	3423	3426	5560	5560					-0.013189743701104817
DQCHCAHCPS	10	Unmodified	_DQCHCAHCPS_					0	0	0			REV__nc|ENSG00000135253|Q6ZWJ8-4|KCP	REV__nc|ENSG00000135253|Q6ZWJ8-4|KCP	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.6890258789062	2	550.688961	1099.36337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.707	1	15.765	15.265	16.265	0.057872								0	0	0	0.45132	1	65	65		32.812	8.6097	1		+		4984	19203	3424	3427	5561	5561					-0.18233871188158446
DQCSHRDASL	10	Unmodified	_DQCSHRDASL_					0	0	0			REV__nc|ENSG00000167992|Q96DN2-2|VWCE	REV__nc|ENSG00000167992|Q96DN2-2|VWCE	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	566.248046875	2	566.246012	1130.47747	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.579	1	18.579	18.079	19.079	0								0	0	0	0.45132	1	319	319		31.53	1.0262	1		+		4985	21446	3425	3428	5562	5562					-0.08254941830023199
DQGHGARHNA	10	Unmodified	_DQGHGARHNA_					0	0	0			REV__ENST00000536447.6_1_22:42487490-42520529:+|nuORF	REV__ENST00000536447.6_1_22:42487490-42520529:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.7420654296875	2	531.744828	1061.4751	-0.5834	-0.00031022	-4.0546	-0.002156	-4.638	-0.0024662	531.7424675349406	41.841	0.61122	41.802	41.491	42.103	-0.038223					36	14	3	0	0	0	0.86348	1	3197	3197		31.53	1.0262	1	453650	+		4986	28409	3426	3429	5563	5563					-0.053176094528225804
DQGKITEYGK	10	Unmodified	_DQGKITEYGK_					0	0	0		ENSG00000135776|ENST00000344517|ABCB10	ENSG00000135776|ENST00000344517|ABCB10	ENSG00000135776|ENST00000344517|ABCB10	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.8370361328125	2	569.790578	1137.5666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.88	1	112.98	112.48	113.48	0.10638								0	0	0	0.45132	1	12137	12137		24.519	3.5723	1				4987	4054	3427	3430	5564	5564					0.0033221640114788897
DQGLPPLS	8	Unmodified	_DQGLPPLS_					0	0	0			REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000171914|ENST00000636159|TLN2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2369079589844	2	413.718893	825.423233	-0.34727	-0.00014367	-1.7956	-0.00074286	-2.1428	-0.00088653	413.718071336443	75.468	0.68063	75.422	75.059	75.739	-0.045982					20	17	2	0	0	0	0.4196	1	7466	7466		11.511	0	1	29299	+		4988	21784	3428	3431	5565	5565					0.0035383408070401856
DQGPPERVV	9	Unmodified	_DQGPPERVV_					0	0	0		ENST00000503671.2_1_4:110737056-110740318:+|nuORF;nc|ENSG00000109534|Q9NY12-2|GAR1;ENST00000506840.5_1_4:110736915-110743667:+|nuORF;ENSG00000109534|ENST00000226796|GAR1	ENST00000503671.2_1_4:110737056-110740318:+|nuORF	ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8034973144531	2	498.759081	995.503609	-1.3205	-0.00065862	1.4899	0.00074308	0.16936	8.4468E-05	498.7597591557199	51.994	0.66822	52.007	51.682	52.351	0.012436					27	15	2	0	0	0	0.20789	1	4509	4509		34.173	14.813	1	106220			4989	12889	3429	3432	5566	5566					0.005676954037653559
DQGTMQYFRR	10	Unmodified	_DQGTMQYFRR_					0	0	0			REV__ENSG00000162040|ENST00000454677|HS3ST6	REV__ENSG00000162040|ENST00000454677|HS3ST6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77972412109375	3	434.540028	1300.59825	0.63261	0.0002749	-4.2827	-0.001861	-3.6501	-0.0015861	434.5382041263929	42.786	0.40172	42.787	42.535	42.937	0.00016785					14	9	2	0	0	0	0.37624	1	3260	3260		12.957	0	1	55271	+		4990	20792	3430	3433	5567	5567					-0.04002114116565281
DQGYPAAS	8	Unmodified	_DQGYPAAS_					0	0	0		ENSG00000187720|ENST00000261862|THSD4;nc|ENSG00000187720|Q6ZMP0-2|THSD4	ENSG00000187720|ENST00000261862|THSD4	ENSG00000187720|ENST00000261862|THSD4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.56500244140625	2	404.677225	807.339897	-0.1888	-7.6401E-05	-2.6069	-0.001055	-2.7957	-0.0011314	404.6772789157507	63.115	0.15221	63.109	63.013	63.165	-0.0055504					8	6	2	0	0	0	0.4196	1	5871	5871		3.41	0	1	22108			4991	7875	3431	3434	5568	5568					-0.07147902367148617
DQGYVGEES	9	Unmodified	_DQGYVGEES_					0	0	0			REV__ENSG00000133135|ENST00000255499|RNF128	REV__ENSG00000133135|ENST00000255499|RNF128	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.2965393066406	2	492.201261	982.38797	-0.58605	-0.00028845	1.4193	0.00069859	0.83327	0.00041014	492.20177357844017	58.229	1.2673	58.213	57.861	59.128	-0.016426					105	54	3	0	0	0	0.20789	1	5037	5037		40.778	0	1	335890	+		4992	19063	3432	3435	5569	5569					-0.10392873237742606
DQHGPPQVLPI	11	Unmodified	_DQHGPPQVLPI_					0	0	0			REV__ENST00000475684.2_1_6:31124506-31125946:-|nuORF	REV__ENST00000475684.2_1_6:31124506-31125946:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.824462890625	2	600.822212	1199.62987	-0.59314	-0.00035637	4.4207	0.002656	3.8275	0.0022997	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.57736	1	6793	6793		46.457	2.0796	1	825510	+		4993	23502	3433	3436	5570	5570					0.03804201909042604
DQHLQRLKS	9	Unmodified	_DQHLQRLKS_					0	0	0		nc|ENSG00000273540|Q96MI9|AGBL1	nc|ENSG00000273540|Q96MI9|AGBL1	nc|ENSG00000273540|Q96MI9|AGBL1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	562.9219970703125	2	562.812179	1123.60981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.722	1	23.775	23.275	24.275	0.05291								0	0	0	0.31117	1	771	771		26.693	0	1				4994	15313	3434	3437	5571	5571					0.05294450969063291
DQIKVLQQRIL	11	Unmodified	_DQIKVLQQRIL_					0	0	0		ENSG00000159256|ENST00000400485|MORC3	ENSG00000159256|ENST00000400485|MORC3	ENSG00000159256|ENST00000400485|MORC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9430236816406	3	451.945271	1352.81398	-0.094243	-4.2593E-05	-4.1136	-0.0018591	-4.2078	-0.0019017	451.9433078192179	55.499	2.0176	55.489	54.191	56.208	-0.010136					136	62	4	0	0	0	0.75457	1	4901	4901		21.032	3.1991	1	381010			4995	5518	3435	3438	5572	5572					0.15168970339755106
DQISHRASL	9	Unmodified	_DQISHRASL_					0	0	0		nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1;ENSG00000105939|ENST00000242351|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-3|ZC3HAV1	nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1	nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7718505859375	2	513.76998	1025.52541	0.25741	0.00013225	2.4974	0.0012831	2.7548	0.0014153	513.7715293722142	51.58	0.67187	52.015	51.7	52.372	0.43505					39	15	3	0	0	0	0.14236	1	5126	5126		85.161	10.906	1	933180			4996	2266	3436	3439	5573	5573					0.013665001523349929
DQKASRNE	8	Unmodified	_DQKASRNE_					0	0	0		ENSG00000186184|ENST00000302979|POLR1D	ENSG00000186184|ENST00000302979|POLR1D	ENSG00000186184|ENST00000302979|POLR1D	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.2335510253906	2	474.230687	946.446822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.843	1	22.793	22.293	23.293	-0.050077								0	0	0	0.29857	1	715	715		39.253	2.0937	1				4997	7780	3437	3440	5574	5574					-0.028543521527581106
DQKILLLL	8	Unmodified	_DQKILLLL_					0	0	0		ENSG00000142207|ENST00000382751|URB1;nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	ENSG00000142207|ENST00000382751|URB1;nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9747619628906	2	478.312961	954.611368	-1.6324	-0.0007808	3.8277	0.0018308	2.1953	0.00105	478.3144784519838	45.01	0.61337	45.006	44.66	45.274	-0.0041618					18	13	2	0	0	0	0.4196	1	3568	3568		13.454	0	1	54067			4998	6613;4549	3438	3441	5575	5575					0.13224692005132965
DQKKEVPKRIL	11	Unmodified	_DQKKEVPKRIL_					0	0	0		nc|ENSG00000204138|Q8IZ21-3|PHACTR4;ENSG00000204138|ENST00000373839|PHACTR4;nc|ENSG00000204138|Q8IZ21-2|PHACTR4;ENST00000493669.2_1_1:28733953-28817463:+|nuORF	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9431457519531	3	451.945271	1352.81398	-1.6861	-0.00076203	-2.8168	-0.0012731	-4.5029	-0.0020351	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.77205	1	4370	4370		17.167	0.63689	1	792670			4999	8418	3439	3442	5576	5576					0.15168970339755106
DQKKEVPKRIL	11	Unmodified	_DQKKEVPKRIL_					0	0	0		nc|ENSG00000204138|Q8IZ21-3|PHACTR4;ENSG00000204138|ENST00000373839|PHACTR4;nc|ENSG00000204138|Q8IZ21-2|PHACTR4;ENST00000493669.2_1_1:28733953-28817463:+|nuORF	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9435119628906	3	451.945271	1352.81398	-0.47573	-0.000215	-3.838	-0.0017346	-4.3138	-0.0019496	451.9434025086026	55.358	2.0218	55.331	54.102	56.123	-0.027275					115	58	3	0	0	0	0.6593	1	5068	5068		37.6	6.5317	1	431630			5000	8418	3439	3442	5577	5577					0.15168970339755106
DQKKEVPKRIL	11	Unmodified	_DQKKEVPKRIL_					0	0	0		nc|ENSG00000204138|Q8IZ21-3|PHACTR4;ENSG00000204138|ENST00000373839|PHACTR4;nc|ENSG00000204138|Q8IZ21-2|PHACTR4;ENST00000493669.2_1_1:28733953-28817463:+|nuORF	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.27825927734375	3	451.945271	1352.81398	-1.2917	-0.0005838	-3.0438	-0.0013756	-4.3355	-0.0019594	451.94377054874303	55.311	1.3656	55.375	54.704	56.07	0.063725					141	47	4	0	0	0	0.73277	1	4606	4606		25.892	8.0586	1	457030			5001	8418	3439	3442	5578	5578					0.15168970339755106
DQKKEVPKRIL	11	Unmodified	_DQKKEVPKRIL_					0	0	0		nc|ENSG00000204138|Q8IZ21-3|PHACTR4;ENSG00000204138|ENST00000373839|PHACTR4;nc|ENSG00000204138|Q8IZ21-2|PHACTR4;ENST00000493669.2_1_1:28733953-28817463:+|nuORF	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9432373046875	3	451.945271	1352.81398	-0.53384	-0.00024127	-4.227	-0.0019104	-4.7608	-0.0021516	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.76087	2	4288	4288;4355		19.627	1.7938	1	920720			5002	8418	3439	3442	5579;5580	5579					0.15168970339755106
DQKTQRLLSR	10	Unmodified	_DQKTQRLLSR_					0	0	0		ENSG00000177453|ENST00000326035|NIM1K	ENSG00000177453|ENST00000326035|NIM1K	ENSG00000177453|ENST00000326035|NIM1K	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.5903625488281	3	415.573837	1243.69968	1.1633	0.00048346	2.5341	0.0010531	3.6975	0.0015366	415.5747480122736	33.444	0.41948	33.614	33.442	33.861	0.16971					24	9	3	0	0	0	0.37624	1	2411	2411		24.232	0	1	245820			5003	7140	3440	3443	5581	5581					0.08758080577649707
DQKTQRLLSR	10	Unmodified	_DQKTQRLLSR_					0	0	0		ENSG00000177453|ENST00000326035|NIM1K	ENSG00000177453|ENST00000326035|NIM1K	ENSG00000177453|ENST00000326035|NIM1K	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.5892333984375	3	415.573837	1243.69968	1.0476	0.00043535	2.3175	0.00096311	3.3651	0.0013985	415.5747214942992	33.468	0.58431	33.68	33.44	34.024	0.21168					30	13	3	0	0	0	0.37624	1	2439	2439		18.531	0	1	273640			5004	7140	3440	3443	5582	5582					0.08758080577649707
DQKVIRNH	8	Unmodified	_DQKVIRNH_					0	0	0			REV__ENSG00000237452|ENST00000457052|MEIOSIN	REV__ENSG00000237452|ENST00000457052|MEIOSIN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34527587890625	2	505.280515	1008.54648	0.11031	5.5739E-05	2.1694	0.0010962	2.2798	0.0011519	505.2813338517615	55.234	0.41926	55.635	55.446	55.866	0.40101					14	9	2	0	0	0	0.4196	1	5683	5683		25.45	0	1	163850	+		5005	23798	3441	3444	5583	5583					0.04254510251837473
DQKYGGKGY	9	Unmodified	_DQKYGGKGY_					0	0	0		ENSG00000145220|ENST00000343470|LYAR	ENSG00000145220|ENST00000343470|LYAR	ENSG00000145220|ENST00000343470|LYAR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.77081298828125	2	508.245806	1014.47706	1.8919	0.00096157	-1.3257	-0.0006738	0.5662	0.00028777	508.2455295023839	34.09	0.32937	34.395	34.159	34.488	0.30494					13	7	3	0	0	0	0.20789	1	2507	2507		14.865	0	1	93826			5006	4755	3442	3445	5584	5584					-0.029599934875591316
DQLEKMQGD	9	Unmodified	_DQLEKMQGD_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.237060546875	2	532.239864	1062.46517	-0.7	-0.00037257	-2.9156	-0.0015518	-3.6156	-0.0019244	532.2381204164618	39.876	0.77567	39.833	39.45	40.226	-0.043694					41	17	3	0	0	0	0.71772	1	2873	2873		39.253	5.0803	1	279060	+		5007	19132	3443	3446	5585	5585					-0.0635597829307244
DQLGKIFDLI	10	Unmodified	_DQLGKIFDLI_					0	0	0		nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	581.3270874023438	2	581.329339	1160.64412	-0.79895	-0.00046445	0.93616	0.00054422	0.13721	7.9764E-05	581.3296672747548	76.382	0.53358	76.781	76.491	77.025	0.3997					19	12	2	0	0	0	0.66675	1	8682	8682		46.457	13.644	1	207520			5008	4021	3444	3447	5586	5586					0.07022854337333229
DQLGKIFDLI	10	Unmodified	_DQLGKIFDLI_					0	0	0		nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.3287963867188	2	581.329339	1160.64412	-0.66527	-0.00038674	1.0092	0.00058665	0.34388	0.00019991	581.3298772402775	76.241	0.54275	76.809	76.557	77.1	0.56836					24	14	2	0	0	0	0.5442	1	8688	8688		53.089	15.277	1	260850			5009	4021	3444	3447	5587	5587					0.07022854337333229
DQLHSLVPL	9	Unmodified	_DQLHSLVPL_					0	0	0			REV__ENST00000491293.1_1_1:228290129-228290330:-|nuORF	REV__ENST00000491293.1_1_1:228290129-228290330:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.2863464355469	2	511.287474	1020.5604	-1.5518	-0.0007934	0.65042	0.00033255	-0.90135	-0.00046085	511.28763661664226	41.815	1.2851	41.815	41.359	42.644	0					75	31	4	0	0	0	0.084975	1	2882	2882		96.19	13.95	1	1825200	+		5010	27655	3445	3448	5588	5588					0.05093742960275449
DQLHSLVPL	9	Unmodified	_DQLHSLVPL_					0	0	0			REV__ENST00000491293.1_1_1:228290129-228290330:-|nuORF	REV__ENST00000491293.1_1_1:228290129-228290330:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.2865905761719	2	511.287474	1020.5604	0.36299	0.00018559	-1.6305	-0.00083365	-1.2675	-0.00064806	511.28657650841876	42.002	2.0595	41.971	41.461	43.521	-0.030987					111	49	5	0	0	0	0.073112	1	3120	3120		99.375	3.1845	1	6140800	+		5011	27655	3445	3448	5589	5589					0.05093742960275449
DQLHSLVPL	9	Unmodified	_DQLHSLVPL_					0	0	0			REV__ENST00000491293.1_1_1:228290129-228290330:-|nuORF	REV__ENST00000491293.1_1_1:228290129-228290330:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2867736816406	2	511.287474	1020.5604	-0.92708	-0.000474	-0.33784	-0.00017274	-1.2649	-0.00064674	511.2872429876972	41.91	2.375	41.872	41.45	43.825	-0.038223					133	56	5	0	0	0	0.073112	2	3212	3164;3212		99.375	3.1845	1	7049200	+		5012	27655	3445	3448	5590;5591	5591					0.05093742960275449
DQLHSLVPL	9	Unmodified	_DQLHSLVPL_					0	0	0			REV__ENST00000491293.1_1_1:228290129-228290330:-|nuORF	REV__ENST00000491293.1_1_1:228290129-228290330:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.2867126464844	2	511.287474	1020.5604	-0.43839	-0.00022414	-0.24891	-0.00012726	-0.68729	-0.0003514	511.2870812500734	41.969	0.73903	41.973	41.619	42.358	0.0043983					43	18	3	0	0	0	0.58668	1	2801	2801		47.657	0	1	753980	+		5013	27655	3445	3448	5592	5592					0.05093742960275449
DQLHSLVPL	9	Unmodified	_DQLHSLVPL_					0	0	0			REV__ENST00000491293.1_1_1:228290129-228290330:-|nuORF	REV__ENST00000491293.1_1_1:228290129-228290330:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.2862243652344	2	511.287474	1020.5604	0.062378	3.1893E-05	-1.1131	-0.00056911	-1.0507	-0.00053722	511.28662483602045	41.834	0.71769	41.788	41.434	42.152	-0.045467					37	17	3	0	0	0	0.28163	1	2759	2759		66.429	2.222	1	644920	+		5014	27655	3445	3448	5593	5593					0.05093742960275449
DQLKKVTN	8	Unmodified	_DQLKKVTN_					0	0	0			REV__nc|ENSG00000100014|Q69YQ0-2|SPECC1L	REV__nc|ENSG00000100014|Q69YQ0-2|SPECC1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.28216552734375	2	473.271824	944.529095	0.26749	0.0001266	-3.3647	-0.0015924	-3.0972	-0.0014658	473.2696780146913	33.716	0.45403	34.021	33.787	34.241	0.30495					12	10	2	0	0	0	0.4196	1	2492	2492		34.173	6.2903	1	79916	+		5015	17125	3446	3449	5594	5594					0.05461169926184084
DQLKQIFLR	9	Unmodified	_DQLKQIFLR_					0	0	0			REV__ENST00000394662.2_1_1:89887573-89889825:+|nuORF	REV__ENST00000394662.2_1_1:89887573-89889825:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.84130859375	2	580.842948	1159.67134	-0.90693	-0.00052678	-3.2677	-0.001898	-4.1746	-0.0024248	580.8407767096548	69.755	0.8518	69.79	69.548	70.399	0.035622					124	41	4	0	0	0	0.7932	1	6721	6721		25.574	1.0549	1	14836000	+		5016	26088	3447	3450	5595	5595					0.097893826683503
DQLLLILV	8	Unmodified	_DQLLLILV_					0	0	0		nc|ENSG00000163026|Q9H6R7-2|WDCP;ENSG00000163026|ENST00000295148|WDCP	nc|ENSG00000163026|Q9H6R7-2|WDCP	nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80169677734375	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.83646	1	3315	3315		12.207	0	1	279560			5017	5758	3448	3451	5596	5596					0.11905003113815837
DQLLLILV	8	Unmodified	_DQLLLILV_					0	0	0		nc|ENSG00000163026|Q9H6R7-2|WDCP;ENSG00000163026|ENST00000295148|WDCP	nc|ENSG00000163026|Q9H6R7-2|WDCP	nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8008117675781	2	463.799686	925.584819	-1.1343	-0.00052608	3.785	0.0017555	2.6507	0.0012294	463.8012667988253	46.183	0.63174	46.199	45.791	46.422	0.015514					31	18	2	0	0	0	0.884	1	3386	3386		33.516	8.0654	1	155340			5018	5758	3448	3451	5597	5597					0.11905003113815837
DQLLLILV	8	Unmodified	_DQLLLILV_					0	0	0		nc|ENSG00000163026|Q9H6R7-2|WDCP;ENSG00000163026|ENST00000295148|WDCP	nc|ENSG00000163026|Q9H6R7-2|WDCP	nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8002624511719	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.81724	1	3205	3205		14.664	0.88877	1	1091400			5019	5758	3448	3451	5598	5598					0.11905003113815837
DQLLLLRGE	9	Unmodified	_DQLLLLRGE_					0	0	0			REV__nc|ENSG00000102977|Q96AP0-2|ACD	REV__nc|ENSG00000102977|Q96AP0-2|ACD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.6577758789062	2	528.806031	1055.59751	0.40681	0.00021513	0.22558	0.00011929	0.63239	0.00033441	529.3081857639992	26.575	0.54177	26.399	26.25	26.792	-0.17559					18	11	2	0	0	0	0.20789	1	1508	1508		14.865	0	1	71450	+		5020	17376	3449	3452	5599	5599					0.07193414506059526
DQLQKAPKGVG	11	Unmodified	_DQLQKAPKGVG_					0	0	0			REV__ENSG00000116903|ENST00000366645|EXOC8	REV__ENSG00000116903|ENST00000366645|EXOC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.8228759765625	2	570.822212	1139.62987	0.47648	0.00027199	3.3136	0.0018915	3.7901	0.0021635	570.824103297056	61.379	0.88304	61.486	61.341	62.225	0.10743					65	40	2	0	0	0	0.732	1	5350	5350		26.063	0.48933	1	1285800	+		5021	18232	3450	3453	5600	5600					0.06564201909009171
DQLQKFVQY	9	Unmodified	_DQLQKFVQY_					0	0	0		ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000132003|Q9H7M6|ZSWIM4;ENSG00000132003|ENST00000590508|ZSWIM4	ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000132003|Q9H7M6|ZSWIM4	ENSG00000130449|ENST00000252744|ZSWIM6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.2683715820312	2	584.803488	1167.59242	-0.11512	-6.7323E-05	0.012901	7.5448E-06	-0.10222	-5.9778E-05	584.8034081447156	54.428	0.43533	54.402	54.242	54.678	-0.025955					17	13	2	0	0	0	0.20789	1	4899	4899		47.657	0	1	111070			5022	3646;3759	3451	3454	5601	5601					0.01533110643413238
DQLQKFVQY	9	Unmodified	_DQLQKFVQY_					0	0	0		ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000132003|Q9H7M6|ZSWIM4;ENSG00000132003|ENST00000590508|ZSWIM4	ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000132003|Q9H7M6|ZSWIM4	ENSG00000130449|ENST00000252744|ZSWIM6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	584.803488	1167.59242	-0.73131	-0.00042767	1.0509	0.00061454	0.31955	0.00018687	584.8041641461132	54.486	0.34558	54.478	54.385	54.731	-0.0077057	-0.061737	0.000242	NaN	47.657	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125610			5023	3646;3759	3451	3454							0.01533110643413238
DQLQKFVQY	9	Unmodified	_DQLQKFVQY_					0	0	0		ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000132003|Q9H7M6|ZSWIM4;ENSG00000132003|ENST00000590508|ZSWIM4	ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000132003|Q9H7M6|ZSWIM4	ENSG00000130449|ENST00000252744|ZSWIM6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	584.803488	1167.59242	-1.213	-0.00070934	1.4203	0.00083061	0.20737	0.00012127	584.8043309648867	54.504	0.50582	54.532	54.288	54.794	0.027142	-0.0085224	0.00067414	NaN	47.657	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113540			5024	3646;3759	3451	3454							0.01533110643413238
DQLQKFVQY	9	Unmodified	_DQLQKFVQY_					0	0	0		ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000132003|Q9H7M6|ZSWIM4;ENSG00000132003|ENST00000590508|ZSWIM4	ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000132003|Q9H7M6|ZSWIM4	ENSG00000130449|ENST00000252744|ZSWIM6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	584.803488	1167.59242	-0.33278	-0.00019461	0.30088	0.00017596	-0.031904	-1.8658E-05	584.8033828602738	54.272	0.71382	54.678	54.361	55.075	0.40663	0.13829	-0.00063517	NaN	47.657	30	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254000			5025	3646;3759	3451	3454							0.01533110643413238
DQLQKFVQY	9	Unmodified	_DQLQKFVQY_					0	0	0		ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000132003|Q9H7M6|ZSWIM4;ENSG00000132003|ENST00000590508|ZSWIM4	ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000132003|Q9H7M6|ZSWIM4	ENSG00000130449|ENST00000252744|ZSWIM6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	584.803488	1167.59242	-0.65749	-0.0003845	0.9667	0.00056533	0.30922	0.00018083	584.8037894108943	54.025	0.70988	54.61	54.376	55.085	0.58474	0.069897	0.00014358	NaN	47.657	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	275630			5026	3646;3759	3451	3454							0.01533110643413238
DQLRERAHE	9	Unmodified	_DQLRERAHE_					0	0	0			REV__ENSG00000257365|ENST00000246166|FNTB	REV__ENSG00000257365|ENST00000246166|FNTB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.2750244140625	2	577.289068	1152.56358	-0.50686	-0.0002926	3.2125	0.0018545	2.7056	0.0015619	577.2901351321476	76.375	0.41876	76.775	76.532	76.951	0.39969					12	9	2	0	0	0	0.20789	1	8668	8668		30.318	0	1	117600	+		5027	23920	3452	3455	5602	5602					-0.006596139330213191
DQLSSKKNIN	10	Unmodified	_DQLSSKKNIN_					0	0	0			REV__ENSG00000095203|ENST00000374566|EPB41L4B	REV__ENSG00000095203|ENST00000374566|EPB41L4B	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	573.8135986328125	2	573.809302	1145.60405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.19	1	51.105	50.605	51.605	-0.084538								0	0	0	0.45132	1	4067	4067		41.427	4.9799	1		+		5028	17054	3453	3456	5603	5603					0.037073076667638816
DQLTVELF	8	Unmodified	_DQLTVELF_					0	0	0			REV__ENST00000377503.6_1_5:159681329-159707642:-|nuORF	REV__ENST00000377503.6_1_5:159681329-159707642:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.7519226074219	2	482.752933	963.491313	0.5946	0.00028705	-0.30748	-0.00014844	0.28712	0.00013861	482.7527032442209	76.482	0.66589	76.881	76.491	77.157	0.39969					42	18	3	0	0	0	0.5397	1	8674	8674		73.975	5.49	1	681060	+		5029	19190	3454	3457	5604	5604					0.00810658940713438
DQNCCYTTT	9	Unmodified	_DQNCCYTTT_					0	0	0			REV__nc|ENSG00000106799|P36897-3|TGFBR1	REV__nc|ENSG00000106799|P36897-3|TGFBR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.6895751953125	2	524.689149	1047.36375	0.84821	0.00044505	-0.41443	-0.00021745	0.43378	0.0002276	524.6888228565127	26.684	0.8567	26.656	26.191	27.048	-0.027706					40	19	3	0	0	0	0.7932	1	1188	1188		26.693	4.1133	1	95922	+		5030	17630	3455	3458	5605	5605					-0.1580417298730481
DQNDYYSPPGE	11	Unmodified	_DQNDYYSPPGE_					0	0	0			REV__ENSG00000178719|ENST00000395068|GRINA	REV__ENSG00000178719|ENST00000395068|GRINA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.7525024414062	2	642.754389	1283.49423	0.046508	2.9893E-05	-2.1736	-0.0013971	-2.1271	-0.0013672	642.7527988076217	52.206	0.94975	52.204	51.833	52.783	-0.0020447					58	23	4	0	0	0	0.31977	1	4493	4493		70.816	12.586	1	917140	+		5031	22290	3456	3459	5606	5606					-0.13618162463103545
DQNDYYSPPGE	11	Unmodified	_DQNDYYSPPGE_					0	0	0			REV__ENSG00000178719|ENST00000395068|GRINA	REV__ENSG00000178719|ENST00000395068|GRINA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.753173828125	2	642.754389	1283.49423	-0.76535	-0.00049193	-1.3683	-0.00087951	-2.1337	-0.0013714	642.7533636052166	52.144	0.88099	52.12	51.821	52.702	-0.023853					49	20	3	0	0	0	0.1214	1	4606	4606		88.177	10.859	1	1141900	+		5032	22290	3456	3459	5607	5607					-0.13618162463103545
DQNEFIGLL	9	Unmodified	_DQNEFIGLL_					0	0	0			REV__ENSG00000173598|ENST00000415493|NUDT4	REV__ENSG00000173598|ENST00000415493|NUDT4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2503051757812	2	524.769114	1047.52368	0.97941	0.00051396	1.3258	0.00069572	2.3052	0.0012097	524.7694977625725	50.231	0.69577	51.076	50.599	51.295	0.84501					25	16	2	0	0	0	0.20789	1	4970	4970		44.117	3.3386	1	523190	+		5033	21936	3457	3460	5608	5608					0.001814463437312952
DQPENLAEGTL	11	Unmodified	_DQPENLAEGTL_					0	0	0		ENST00000493703.1_1_1:120465142-120466525:-|nuORF;ENSG00000134250|ENST00000256646|NOTCH2	ENST00000493703.1_1_1:120465142-120466525:-|nuORF	ENST00000493703.1_1_1:120465142-120466525:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	593.7864990234375	2	593.78295	1185.55135	-0.29661	-0.00017612	3.131	0.0018591	2.8344	0.001683	593.7845042831175	68.621	0.62668	69.168	68.908	69.534	0.54693					29	14	3	0	0	0	0.58516	1	7581	7581		45.908	7.1545	1	223100			5034	3919	3458	3461	5609	5609					-0.03400695186701341
DQPGTNCA	8	Unmodified	_DQPGTNCA_					0	0	0		ENSG00000197859|ENST00000651351|ADAMTSL2	ENSG00000197859|ENST00000651351|ADAMTSL2	ENSG00000197859|ENST00000651351|ADAMTSL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5749816894531	2	403.160885	804.307217	-0.22945	-9.2506E-05	3.8934	0.0015697	3.664	0.0014772	403.1623070744288	78.99	0.59451	79.539	79.276	79.871	0.54945					18	13	2	0	0	0	0.4196	1	9107	9107		12.959	0	1	127960			5035	8207	3459	3462	5610	5610					-0.10276432761656906
DQPKKFLEV	9	Unmodified	_DQPKKFLEV_					0	0	0			REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.3090209960938	2	552.308406	1102.60226	-1.438	-0.0007942	0.89915	0.00049661	-0.53882	-0.00029759	552.3085003822913	30.078	0.52868	30.107	29.833	30.362	0.028618					21	11	3	0	0	0	0.20789	1	1924	1924		9.1829	0	1	87372	+		5036	19957	3460	3463	5611	5611					0.055062986488110255
DQPLNKVLIKR	11	Unmodified	_DQPLNKVLIKR_					0	0	0			REV__nc|ENSG00000162437|Q9HCJ3-2|RAVER2	REV__nc|ENSG00000162437|Q9HCJ3-2|RAVER2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2748718261719	3	441.94175	1322.80342	-0.1083	-4.7863E-05	-4.2447	-0.0018759	-4.353	-0.0019238	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.75457	1	4866	4866		21.032	2.5012	1	447080	+		5037	20816	3461	3464	5612	5612					0.15492987685320259
DQPVKMNSL	9	Unmodified	_DQPVKMNSL_					0	0	0		ENST00000590114.5_1_17:43138721-43173651:+|nuORF;ENSG00000136448|ENST00000258960|NMT1	ENST00000590114.5_1_17:43138721-43173651:+|nuORF	ENST00000590114.5_1_17:43138721-43173651:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7626953125	2	516.263142	1030.51173	0.63705	0.00032889	2.7953	0.0014431	3.4323	0.001772	516.2647189136951	53.684	0.66801	54.098	53.827	54.495	0.4139					23	15	2	0	0	0	0.20789	1	5461	5461		26.693	0	1	808240			5038	4111	3462	3465	5613	5613					-0.0023049367111980246
DQQCELQLWPP	11	Unmodified	_DQQCELQLWPP_					0	0	0			REV__ENST00000454784.8_2_12:40953042-40955390:+|nuORF	REV__ENST00000454784.8_2_12:40953042-40955390:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.881103515625	3	452.879939	1355.61799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.988	1	17.988	17.488	18.488	0								0	0	0	0.56276	1	259	259		27.644	3.4121	1		+		5039	26930	3463	3466	5614	5614					-0.04559782896467368
DQQDEHPKLDR	11	Unmodified	_DQQDEHPKLDR_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.74639892578125	3	460.888262	1379.64296	-0.080456	-3.7081E-05	0.20452	9.426E-05	0.12406	5.7179E-05	460.88814629152256	20.203	0.54975	19.573	19.214	19.764	-0.6296					14	11	2	0	0	0	0.17365	1	645	645		15.921	0	1	24771	+		5040	17968	3464	3467	5615	5615					-0.03168011769548684
DQQRNLSSRSY	11	Unmodified	_DQQRNLSSRSY_					0	0	0			REV__nc|ENSG00000102710|Q8NEM7-2|SUPT20H	REV__nc|ENSG00000102710|Q8NEM7-2|SUPT20H	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9429016113281	3	451.888373	1352.64329	-1.6879	-0.00076274	0.7978	0.00036052	-0.89011	-0.00040223	452.2230273460587	53.291	0.23981	53.291	53.218	53.458	0					9	6	2	0	0	0	0.17504	1	4421	4421		10.562	4.8631	1	34050	+		5041	17349	3465	3468	5616	5616					-0.018925920496712934
DQQVMEMCQ	9	Oxidation (M)	_DQQVM(Oxidation (M))EMCQ_		DQQVM(0.5)EM(0.5)CQ		DQQVM(0)EM(0)CQ	0	0	1			REV__ENST00000318220.10_1_1:21771676-21793562:+|nuORF	REV__ENST00000318220.10_1_1:21771676-21793562:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.2118530273438	2	564.211934	1126.40932	1.0973	0.00061908	-0.91795	-0.00051792	0.1793	0.00010116	564.2112650469574	29.202	0.861	29.029	28.674	29.535	-0.17336					40	19	3	0	0	0	0.47272	1	1832	1832		53.351	7.3792	2	1359100	+		5042	24972	3466	3469	5617	5617		388;389			-0.14883270796553916
DQQVRYNAL	9	Unmodified	_DQQVRYNAL_					0	0	0		nc|ENSG00000047249|Q9UI12-2|ATP6V1H;ENSG00000047249|ENST00000359530|ATP6V1H	nc|ENSG00000047249|Q9UI12-2|ATP6V1H	nc|ENSG00000047249|Q9UI12-2|ATP6V1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.782958984375	2	553.783087	1105.55162	0.19695	0.00010907	0.14464	8.0102E-05	0.3416	0.00018917	553.7827806657732	45.729	0.38831	45.744	45.523	45.911	0.015511					17	10	3	0	0	0	0.58668	1	3304	3304		47.657	0	1	179120			5043	956	3467	3470	5618	5618					0.0030676932381084043
DQQVRYNAL	9	Unmodified	_DQQVRYNAL_					0	0	0		nc|ENSG00000047249|Q9UI12-2|ATP6V1H;ENSG00000047249|ENST00000359530|ATP6V1H	nc|ENSG00000047249|Q9UI12-2|ATP6V1H	nc|ENSG00000047249|Q9UI12-2|ATP6V1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.782958984375	2	553.783087	1105.55162	0.064323	3.5621E-05	-0.34141	-0.00018907	-0.27709	-0.00015345	553.7827715084053	45.714	0.59673	45.645	45.317	45.914	-0.068634					21	15	2	0	0	0	0.66686	1	3309	3309		42.864	1.4377	1	151340			5044	956	3467	3470	5619	5619					0.0030676932381084043
DQQVRYNAL	9	Unmodified	_DQQVRYNAL_					0	0	0		nc|ENSG00000047249|Q9UI12-2|ATP6V1H;ENSG00000047249|ENST00000359530|ATP6V1H	nc|ENSG00000047249|Q9UI12-2|ATP6V1H	nc|ENSG00000047249|Q9UI12-2|ATP6V1H	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	553.783087	1105.55162	0.3583	0.00019842	-0.34632	-0.00019179	0.011972	6.63E-06	553.7826285467613	45.646	0.46501	45.688	45.523	45.988	0.042599	0.058271	-0.0014584	NaN	47.657	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	168330			5045	956	3467	3470							0.0030676932381084043
DQQVRYNAL	9	Unmodified	_DQQVRYNAL_					0	0	0		nc|ENSG00000047249|Q9UI12-2|ATP6V1H;ENSG00000047249|ENST00000359530|ATP6V1H	nc|ENSG00000047249|Q9UI12-2|ATP6V1H	nc|ENSG00000047249|Q9UI12-2|ATP6V1H	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	553.783087	1105.55162	-0.89905	-0.00049788	3.281	0.0018169	2.3819	0.0013191	553.7847981722991	45.018	0.93644	45.481	45.145	46.082	0.46313	-0.1492	0.0025591	NaN	47.657	32	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211890			5046	956	3467	3470							0.0030676932381084043
DQQVRYNAL	9	Unmodified	_DQQVRYNAL_					0	0	0		nc|ENSG00000047249|Q9UI12-2|ATP6V1H;ENSG00000047249|ENST00000359530|ATP6V1H	nc|ENSG00000047249|Q9UI12-2|ATP6V1H	nc|ENSG00000047249|Q9UI12-2|ATP6V1H	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	553.783087	1105.55162	-1.0568	-0.00058522	3.2967	0.0018257	2.24	0.0012405	553.7847544419557	44.747	0.5714	45.591	45.3	45.872	0.84438	-0.038621	0.0025765	NaN	47.657	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	236990			5047	956	3467	3470							0.0030676932381084043
DQRETDSL	8	Unmodified	_DQRETDSL_					0	0	0			REV__nc|ENSG00000187741|O15360-3|FANCA	REV__nc|ENSG00000187741|O15360-3|FANCA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.2199401855469	2	482.222528	962.430503	-0.40832	-0.0001969	-3.4646	-0.0016707	-3.8729	-0.0018676	482.22073831413036	56.996	0.58132	57.393	57.16	57.741	0.39672					24	13	2	0	0	0	0.89291	1	5895	5895		36.447	0.82846	1	472980	+		5048	22940	3468	3471	5620	5620					-0.052214781095131
DQRHSKLV	8	Unmodified	_DQRHSKLV_					0	0	0			REV__ENSG00000182793|ENST00000370989|GSTA5	REV__ENSG00000182793|ENST00000370989|GSTA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7759704589844	2	491.775065	981.535577	-1.0869	-0.00053451	3.7943	0.0018659	2.7074	0.0013314	491.77681648122257	71.442	1.0777	71.827	71.42	72.497	0.38449					55	25	3	0	0	0	0.92394	1	7947	7947		47.657	5.2612	1	555920	+		5049	22552	3469	3472	5621	5621					0.04407107877557337
DQRKRRATE	9	Unmodified	_DQRKRRATE_					0	0	0			REV__ENST00000397703.6_1_8:22942023-22947676:+|nuORF	REV__ENST00000397703.6_1_8:22942023-22947676:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.1746826171875	2	580.31816	1158.62177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.859	1	52.93	52.43	53.43	0.070713								0	0	0	0.301	1	4286	4286		30.318	1.1477	1		+		5050	26174	3470	3473	5622	5622					0.0488006771226992
DQRRPQKILR	10	Unmodified	_DQRRPQKILR_					0	0	0			REV__ENSG00000131386|ENST00000339732|GALNT15	REV__ENSG00000131386|ENST00000339732|GALNT15	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26690673828125	3	437.265227	1308.77385	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.275	1	23.335	22.835	23.835	0.060431								0	0	0	0.45132	1	762	762		31.634	13.103	1		+		5051	18949	3471	3474	5623	5623					0.13181468459833923
DQSKIYSR	8	Unmodified	_DQSKIYSR_					0	0	0		ENSG00000108932|ENST00000580666|SLC16A6	ENSG00000108932|ENST00000580666|SLC16A6	ENSG00000108932|ENST00000580666|SLC16A6	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.75933837890625	2	498.759081	995.503609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.467	1	78.604	78.104	79.104	0.13667								0	0	0	0.3055	1	7406	7406		44.117	0	1				5052	2440	3472	3475	5624	5624					0.005676954037653559
DQSLQRQLKV	10	Unmodified	_DQSLQRQLKV_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.56475830078125	3	405.566571	1213.67788	-0.19603	-7.9504E-05	-4.3601	-0.0017683	-4.5562	-0.0018478	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.86742	1	6058	6058		27.644	0	1	328790	+		5053	16905	3473	3476	5625	5625					0.07959275829057333
DQSSSDESWET	11	Unmodified	_DQSSSDESWET_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	635.7420654296875	2	635.738936	1269.46332	-0.74252	-0.00047205	4.4747	0.0028447	3.7322	0.0023727	635.7417565321673	52.368	1.3441	52.368	51.493	52.837	0					66	35	3	0	0	0	0.72739	1	4311	4311		27.047	2.8446	1	270690			5054	8381	3474	3477	5626	5626					-0.16063360567977725
DQSTLDPAI	9	Unmodified	_DQSTLDPAI_					0	0	0			REV__ENSG00000102967|ENST00000219240|DHODH	REV__ENSG00000102967|ENST00000219240|DHODH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.23779296875	2	480.237647	958.460741	0.31099	0.00014935	-0.50741	-0.00024368	-0.19642	-9.4329E-05	480.23734733400903	33.378	0.79589	33.59	33.228	34.024	0.21168					43	18	3	0	0	0	0.049188	1	2420	2420		108.09	3.3409	1	886210	+		5055	17375	3475	3478	5627	5627					-0.020151194443315035
DQVEQRLL	8	Unmodified	_DQVEQRLL_					0	0	0			REV__ENSG00000102189|ENST00000322349|EEA1	REV__ENSG00000102189|ENST00000322349|EEA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.7749328613281	2	500.774731	999.534909	-1.48	-0.00074115	0.77459	0.0003879	-0.70542	-0.00035326	500.77520179835545	50.501	0.59034	50.501	50.257	50.848	0					34	14	3	0	0	0	0.79403	1	4028	4028		63.306	5.495	1	183120	+		5056	17330	3476	3479	5628	5628					0.03512268437862076
DQVLGVLRRPL	11	Unmodified	_DQVLGVLRRPL_					0	0	0		ENSG00000185215|ENST00000560869|TNFAIP2	ENSG00000185215|ENST00000560869|TNFAIP2	ENSG00000185215|ENST00000560869|TNFAIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59246826171875	3	422.594461	1264.76155	-0.79538	-0.00033612	-3.4348	-0.0014515	-4.2302	-0.0017876	422.592922669687	49.251	2.9518	49.227	47.881	50.833	-0.024033					246	71	5	0	0	0	0.75457	1	4218	4218		21.032	1.0018	1	2205000			5057	7688	3477	3480	5629	5629					0.13976431996798055
DQWPRQQN	8	Unmodified	_DQWPRQQN_					0	0	0			REV__ENST00000452837.6_1_3:9406940-9408611:+|nuORF	REV__ENST00000452837.6_1_3:9406940-9408611:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7744750976562	2	536.251954	1070.48936	-1.0725	-0.00057511	1.1344	0.00060833	0.061938	3.3214E-05	536.2525731563854	48.179	0.36287	48.648	48.426	48.788	0.46941					13	8	2	0	0	0	0.4196	1	4645	4645		23.042	0	1	205490	+		5058	26904	3478	3481	5630	5630					-0.043069570245279465
DQWPRQQN	8	Unmodified	_DQWPRQQN_					0	0	0			REV__ENST00000452837.6_1_3:9406940-9408611:+|nuORF	REV__ENST00000452837.6_1_3:9406940-9408611:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	536.251954	1070.48936	-0.84549	-0.00045339	-0.3116	-0.00016709	-1.1571	-0.00062049	536.2520833704408	47.975	0.28045	48.899	48.663	48.944	0.92315	0.12516	-0.00063011	NaN	23.042	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	221140	+		5059	26904	3478	3481							-0.043069570245279465
DQWQRTETD	9	Unmodified	_DQWQRTETD_					0	0	0			REV__ENSG00000178502|ENST00000319121|KLHL11	REV__ENSG00000178502|ENST00000319121|KLHL11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	588.80029296875	2	589.757266	1177.49998	-0.076533	-4.5136E-05	4.3445	0.0025622	4.268	0.0025171	589.7596101438664	53.959	0.37716	54.368	54.156	54.533	0.40954					21	8	3	0	0	0	0.20789	1	5453	5453		31.53	15.057	1	513270	+		5060	22283	3479	3482	5631	5631					-0.08167019160759992
DQYMRRMY	8	Unmodified	_DQYMRRMY_					0	0	0			REV__ENST00000484626.1_1_6:7404210-7405259:+|nuORF	REV__ENST00000484626.1_1_6:7404210-7405259:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.7579956054688	2	581.760243	1161.50593	-0.056076	-3.2623E-05	-3.7324	-0.0021714	-3.7885	-0.002204	581.7579371182112	56.459	1.4283	57.019	56.541	57.97	0.55953					89	31	5	0	0	0	0.90983	1	5914	5914		42.396	4.5846	1	8603500	+		5061	18612	3480	3483	5632	5632					-0.06835915454416863
DRAGEAGADKR	11	Unmodified	_DRAGEAGADKR_					0	0	0			REV__ENST00000441363.1_1_6:74009094-74009619:+|nuORF	REV__ENST00000441363.1_1_6:74009094-74009619:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	573.2877197265625	2	573.286525	1144.5585	-1.3935	-0.00079889	1.3656	0.00078287	-0.027932	-1.6013E-05	573.2873936717183	30.268	1.1577	30.268	29.824	30.981	0					60	39	2	0	0	0	0.66009	1	1379	1379		37.508	3.3356	1	122110	+		5062	26756	3481	3484	5633	5633					-0.007999177956435233
DRARDGHKTLL	11	Unmodified	_DRARDGHKTLL_					0	0	0			REV__nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	REV__nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8609008789062	2	641.354742	1280.69493	2.1015	0.0013478	1.0864	0.00069677	3.1879	0.0020446	641.8572268612736	114.29	2.4777	114.3	113.86	116.34	0.0094528					148	121	2	0	0	0	0.68532	2	13911	13911;13920		33.922	5.8401	1	210520	+		5063	16892	3482	3485	5634;5635	5634					0.06581196434899539
DRARRPHFDQL	11	Unmodified	_DRARRPHFDQL_					0	0	0		nc|ENSG00000106123|O15197-2|EPHB6;nc|ENSG00000106123|O15197|EPHB6;ENSG00000106123|ENST00000652003|EPHB6	nc|ENSG00000106123|O15197-2|EPHB6	nc|ENSG00000106123|O15197-2|EPHB6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.5837707519531	3	470.916486	1409.72763	0.33092	0.00015584	2.2762	0.0010719	2.6071	0.0012277	470.9183390376316	51.607	0.29397	51.667	51.503	51.797	0.059715					12	9	2	0	0	0	0.17586	1	4126	4126		21.78	0	1	97357			5064	2281	3483	3486	5636	5636					0.03915403557743957
DRATKGEPF	9	Unmodified	_DRATKGEPF_					0	0	0			REV__ENSG00000004534|ENST00000266022|RBM6	REV__ENSG00000004534|ENST00000266022|RBM6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.7607727050781	2	510.759081	1019.50361	-0.053174	-2.7159E-05	1.9553	0.00099868	1.9021	0.00097152	510.7592868679248	28.392	0.48716	28.352	28.116	28.603	-0.039907					13	11	2	0	0	0	0.78058	1	1434	1434		30.504	1.3541	1	18275	+		5065	16058	3484	3487	5637	5637					-0.005363045962440083
DRDTLIGL	8	Unmodified	_DRDTLIGL_					0	0	0			REV__ENSG00000049769|ENST00000055335|PPP1R3F	REV__ENSG00000049769|ENST00000055335|PPP1R3F	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7469482421875	2	451.750724	901.486896	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.892	1	33.836	33.336	34.336	-0.056385								0	0	0	0.30316	1	2091	2091		42.474	3.6683	1		+		5066	16373	3485	3488	5638	5638					0.03221194517800541
DRDWIPWKAW	10	Unmodified	_DRDWIPWKAW_					0	0	0			REV__ENST00000423538.6_1_1:156180242-156180479:+|nuORF	REV__ENST00000423538.6_1_1:156180242-156180479:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.732421875	3	458.231412	1371.67241	-1.6191	-0.00074191	-4.1145	-0.0018854	-5.7336	-0.0026273	458.2294373360852	30.34	0.57461	30.369	30.052	30.627	0.028618					25	12	3	0	0	0	0.37624	1	1948	1948		33.922	0	1	133360	+		5067	26508	3486	3489	5639	5639					0.001435970372540396
DREKRVFTE	9	Unmodified	_DREKRVFTE_					0	0	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.3093872070312	2	590.309469	1178.60439	-1.7703	-0.001045	1.5027	0.00088708	-0.26753	-0.00015792	590.3101530818265	32.444	0.60775	32.438	32.214	32.822	-0.0061455					35	14	3	0	0	0	0.41566	1	1844	1844		56.721	13.857	1	138260			5068	2636	3487	3490	5640	5640					0.022227273866292308
DREKRVKPKL	10	Unmodified	_DREKRVKPKL_					0	0	0			REV__ENSG00000155754|ENST00000439140|C2CD6	REV__ENSG00000155754|ENST00000439140|C2CD6	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8933715820312	2	634.893503	1267.77245	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.56	1	107.59	107.09	108.09	0.035622								0	0	0	0.45132	1	11813	11813		44.377	9.199	1		+		5069	20443	3488	3491	5641	5641					0.14927834371087556
DREVYPLVVH	10	Unmodified	_DREVYPLVVH_					0	0	0		nc|ENSG00000141576|Q96PX1-2|RNF157;ENSG00000141576|ENST00000269391|RNF157	nc|ENSG00000141576|Q96PX1-2|RNF157	nc|ENSG00000141576|Q96PX1-2|RNF157	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	613.8304443359375	2	613.830037	1225.64552	-1.3218	-0.00081137	-0.92658	-0.00056876	-2.2484	-0.0013801	613.8292917155297	19.686	0.61468	19.686	19.351	19.966	0					43	27	2	0	0	0	0.8608	1	438	438		34.173	0.25091	1	49196			5070	4514	3489	3492	5642	5642					0.04172488426070231
DRFALPLRRPL	11	Unmodified	_DRFALPLRRPL_					0	0	0			REV__nc|ENSG00000105204|Q9Y463-2|DYRK1B	REV__nc|ENSG00000105204|Q9Y463-2|DYRK1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9430236816406	3	451.941973	1352.80409	0.347	0.00015682	2.6456	0.0011957	2.9926	0.0013525	451.94308439808714	55.355	1.4573	55.446	54.835	56.292	0.091167					122	48	4	0	0	0	0.66858	1	4617	4617		36.528	0	1	477300	+		5071	17513	3490	3493	5643	5643					0.14179827125030897
DRGLFALY	8	Unmodified	_DRGLFALY_					0	0	0		ENSG00000149930|ENST00000308893|TAOK2;nc|ENSG00000149930|Q9UL54-3|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2	ENSG00000149930|ENST00000308893|TAOK2	ENSG00000149930|ENST00000308893|TAOK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.2041015625	2	477.75581	953.497067	-0.52639	-0.00025149	-3.5652	-0.0017033	-4.0916	-0.0019548	477.7538243536124	30.553	0.66411	30.582	30.318	30.982	0.028618					21	14	2	0	0	0	0.4196	1	2038	2038		37.159	18.835	1	62013			5072	5055	3491	3494	5644	5644					0.018458022430422716
DRGLRRNG	8	Unmodified	_DRGLRRNG_					0	0	0			REV__ENST00000411552.5_1_7:30498788-30515497:-|nuORF	REV__ENST00000411552.5_1_7:30498788-30515497:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.2475280761719	2	472.262656	942.51076	-0.46232	-0.00021834	3.1989	0.0015107	2.7366	0.0012924	472.2639747269525	29.902	0.45675	29.887	29.625	30.082	-0.015167					11	9	2	0	0	0	0.4196	1	1511	1511		7.6903	0	1	19697	+		5073	26369	3492	3495	5645	5645					0.03720472794850593
DRGTVKVR	8	Unmodified	_DRGTVKVR_					0	0	0			REV__ENST00000472427.5_1_9:129677191-129778941:+|nuORF	REV__ENST00000472427.5_1_9:129677191-129778941:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7776794433594	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.834	1	79.964	79.464	80.464	0.13086								0	0	0	0.29497	1	7583	7583		34.173	0.67956	1		+		5074	25760	3493	3496	5646	5646					0.07307411740180214
DRGTVKVR	8	Unmodified	_DRGTVKVR_					0	0	0			REV__ENST00000472427.5_1_9:129677191-129778941:+|nuORF	REV__ENST00000472427.5_1_9:129677191-129778941:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.77783203125	2	465.777608	929.540663	-0.69238	-0.0003225	0.76957	0.00035845	0.077191	3.5954E-05	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.82658	1	9569	9569		21.96	1.013	1	927810	+		5075	25760	3493	3496	5647	5647					0.07307411740180214
DRGVDLGVAV	10	Unmodified	_DRGVDLGVAV_					0	0	0		ENST00000498192.5_1_1:145588480-145589073:-|nuORF;ENST00000477878.5_1_1:145588480-145589427:-|nuORF;ENSG00000186364|ENST00000334513|NUDT17	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.7762145996094	2	500.774731	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.576	1	50.485	49.985	50.985	-0.091797								0	0	0	0.45132	1	3982	3982		58.23	0	1				5076	7793	3494	3497	5648	5648					0.03512268437839339
DRHIIHYRQLY	11	Unmodified	_DRHIIHYRQLY_					0	0	0			REV__nc|ENSG00000152953|Q9NY57-2|STK32B	REV__nc|ENSG00000152953|Q9NY57-2|STK32B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.60577392578125	3	505.27227	1512.79498	-0.8306	-0.00041968	-0.46864	-0.00023679	-1.2992	-0.00065647	505.2717068482311	45.184	0.53436	45.647	45.385	45.92	0.46313					33	12	4	0	0	0	0.78683	1	4193	4193		14.086	0	1	938060	+		5077	20324	3495	3498	5649	5649					0.05909433768715644
DRHPNNKLEKL	11	Unmodified	_DRHPNNKLEKL_					0	0	0			REV__nc|ENSG00000116748|P23109-2|AMPD1	REV__nc|ENSG00000116748|P23109-2|AMPD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.7169494628906	3	455.252875	1362.7368	0.52528	0.00023914	-0.25313	-0.00011524	0.27215	0.0001239	455.252889113402	29.295	0.73193	29.194	28.875	29.607	-0.10117					24	16	2	0	0	0	0.17784	1	1899	1899		22.562	10.129	1	56204	+		5078	18221	3496	3499	5650	5650					0.06993752123412378
DRHPNNKLEKL	11	Unmodified	_DRHPNNKLEKL_					0	0	0			REV__nc|ENSG00000116748|P23109-2|AMPD1	REV__nc|ENSG00000116748|P23109-2|AMPD1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	455.252875	1362.7368	-2.0315	-0.00092487	1.9482	0.00088691	-0.083373	-3.7956E-05	455.25386297383466	29.066	0.46231	29.066	28.933	29.395	0	-0.019192	0.0020834	NaN	22.562	24	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25760	+		5079	18221	3496	3499							0.06993752123412378
DRHPNNKLEKL	11	Unmodified	_DRHPNNKLEKL_					0	0	0			REV__nc|ENSG00000116748|P23109-2|AMPD1	REV__nc|ENSG00000116748|P23109-2|AMPD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	455.252875	1362.7368	-1.2922	-0.00058826	1.4324	0.00065211	0.14026	6.3853E-05	455.2535454116328	29.059	0.73767	29.127	28.85	29.588	0.068678	0.042628	0.001379	NaN	22.562	51	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72524	+		5080	18221	3496	3499							0.06993752123412378
DRHPNNKLEKL	11	Unmodified	_DRHPNNKLEKL_					0	0	0			REV__nc|ENSG00000116748|P23109-2|AMPD1	REV__nc|ENSG00000116748|P23109-2|AMPD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	455.252875	1362.7368	0.34281	0.00015606	0.19724	8.9796E-05	0.54005	0.00024586	455.25292766519516	28.877	0.54774	28.899	28.61	29.157	0.021948	-0.18562	-0.00030795	NaN	22.562	42	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95009	+		5081	18221	3496	3499							0.06993752123412378
DRHPNNKLEKL	11	Unmodified	_DRHPNNKLEKL_					0	0	0			REV__nc|ENSG00000116748|P23109-2|AMPD1	REV__nc|ENSG00000116748|P23109-2|AMPD1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	455.252875	1362.7368	-1.4956	-0.00068088	1.9402	0.00088327	0.44458	0.00020239	455.25365740465963	29.092	0.52056	29.063	28.779	29.3	-0.029207	-0.021568	0.0020725	NaN	22.562	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112250	+		5082	18221	3496	3499							0.06993752123412378
DRIAGFIIKHI	11	Unmodified	_DRIAGFIIKHI_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8839721679688	2	641.885147	1281.75574	-1.1529	-0.00074004	-3.1	-0.0019899	-4.2529	-0.0027299	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.72739	1	9916	9916		27.047	0.3544	1	3521600			5083	7954	3497	3500	5651	5651					0.12613333485114708
DRIGVHAA	8	Unmodified	_DRIGVHAA_					0	0	0			REV__ENSG00000102313|ENST00000218436|ITIH6	REV__ENSG00000102313|ENST00000218436|ITIH6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7751159667969	2	419.730126	837.4457	-1.791	-0.00075175	3.1591	0.001326	1.3681	0.00057421	419.7312702520326	41.391	0.36444	41.805	41.647	42.011	0.4139					13	9	2	0	0	0	0.4196	1	3595	3595		24.203	4.8428	1	470770	+		5084	17335	3498	3501	5652	5652					0.02047478268980285
DRILRITG	8	Unmodified	_DRILRITG_					0	0	0		ENSG00000151812|ENST00000556826|SLC35F4	ENSG00000151812|ENST00000556826|SLC35F4	ENSG00000151812|ENST00000556826|SLC35F4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2872314453125	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.86677	1	12772	12772		27.882	4.8398	1	3080300			5085	5145	3499	3502	5653	5653					0.0874858239999412
DRISLIHSKPN	11	Unmodified	_DRISLIHSKPN_					0	0	0			REV__ENSG00000054219|ENST00000263636|LY75	REV__ENSG00000054219|ENST00000263636|LY75	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.35888671875	2	640.359493	1278.70443	2.419	0.001549	-3.4406	-0.0022032	-1.0216	-0.00065422	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.67041	1	10752	10752		36.318	8.4354	1	625580	+		5086	16397	3500	3503	5654	5654					0.07622964720417258
DRKFKKSD	8	Unmodified	_DRKFKKSD_					0	0	0			REV__nc|ENSG00000119314|O95758-1|PTBP3	REV__nc|ENSG00000119314|O95758-1|PTBP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2804565429688	2	512.282723	1022.55089	-1.5312	-0.00078441	-1.1667	-0.00059769	-2.6979	-0.0013821	512.2820384248688	86.195	3.9563	86.353	85.285	89.241	0.15851					164	92	2	0	0	0	0.89962	1	8514	8514		38.806	3.1879	1	356130	+		5087	18348	3501	3504	5655	5655					0.0405197467475773
DRKKMQLIEFS	11	Unmodified	_DRKKMQLIEFS_					0	0	0			REV__ENST00000334344.10_1_12:46287306-46287434:+|nuORF	REV__ENST00000334344.10_1_12:46287306-46287434:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.5835266113281	3	465.586867	1393.73877	-1.1206	-0.00052173	-4.0851	-0.001902	-5.2057	-0.0024237	465.58478300967374	38.693	0.82275	38.704	38.3	39.122	0.010708					48	23	3	0	0	0	0.74405	1	2314	2314		23.378	0.81632	1	219760	+		5088	25155	3502	3505	5656	5656					0.05765044817007947
DRKRLRKRPPI	11	Unmodified	_DRKRLRKRPPI_					0	0	0			REV__nc|ENSG00000171606|Q96GC6-3|ZNF274	REV__nc|ENSG00000171606|Q96GC6-3|ZNF274	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.30938720703125	3	478.975788	1433.90553	-1.3988	-0.00066997	-1.3058	-0.00062544	-2.7046	-0.0012954	478.9750520037149	52.203	1.7713	52.215	51.267	53.038	0.012436					94	42	3	0	0	0	0.79224	1	4480	4480		12.957	0.52465	1	183680	+		5089	21755	3503	3506	5657	5657					0.2059369854760007
DRLDYRLPT	9	Unmodified	_DRLDYRLPT_					0	0	0			REV__nc|ENSG00000009694|Q9UKZ4-2|TENM1;REV__ENSG00000218336|ENST00000511685|TENM3	REV__ENSG00000218336|ENST00000511685|TENM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.8062133789062	2	574.806562	1147.59857	-0.26346	-0.00015144	0.47146	0.000271	0.208	0.00011956	574.8065326924051	34.066	0.74987	34.009	33.651	34.401	-0.056385					37	16	3	0	0	0	0.58668	1	2106	2106		47.657	0	1	189990	+		5090	16149;23698	3504	3507	5658	5658					0.030676288749418745
DRLGFLVVN	9	Unmodified	_DRLGFLVVN_					0	0	0		ENST00000608763.1_1_13:114524697-114525165:-|nuORF	ENST00000608763.1_1_13:114524697-114525165:-|nuORF	ENST00000608763.1_1_13:114524697-114525165:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7935180664062	2	516.795466	1031.57638	-1.5587	-0.00080555	-2.3442	-0.0012115	-3.9029	-0.002017	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.7932	1	8694	8694		23.042	1.0826	1	755180			5091	14477	3505	3508	5659	5659					0.06185449197187154
DRLLEQKSA	9	Unmodified	_DRLLEQKSA_					0	0	0			REV__ENSG00000214491|ENST00000402034|SEC14L6	REV__ENSG00000214491|ENST00000402034|SEC14L6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2927856445312	2	530.293288	1058.57202	0.74166	0.0003933	-0.55232	-0.00029289	0.18935	0.00010041	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.73802	1	9239	9239		37.812	1.3648	1	2081200	+		5092	23654	3506	3509	5660	5660					0.04507939983614051
DRLRALVVIP	10	Unmodified	_DRLRALVVIP_					0	0	0		ENSG00000101017|ENST00000372285|CD40	ENSG00000101017|ENST00000372285|CD40	ENSG00000101017|ENST00000372285|CD40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3698120117188	2	576.36659	1150.71863	0.5205	0.0003	4.1404	0.0023864	4.6609	0.0026864	576.3688108191589	39.411	1.3074	39.422	39.01	40.317	0.010704					81	33	3	0	0	0	0.86763	1	2434	2434		26.693	2.4902	1	325270			5093	1894	3507	3510	5661	5661					0.14929661939368088
DRLRALVVIP	10	Unmodified	_DRLRALVVIP_					0	0	0		ENSG00000101017|ENST00000372285|CD40	ENSG00000101017|ENST00000372285|CD40	ENSG00000101017|ENST00000372285|CD40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.368896484375	2	576.36659	1150.71863	0.38706	0.00022309	4.0536	0.0023364	4.4407	0.0025595	576.3687857053872	46.409	2.2039	46.447	45.362	47.565	0.038181					117	60	3	0	0	0	0.86763	1	3496	3496		26.693	10.22	1	342020			5094	1894	3507	3510	5662	5662					0.14929661939368088
DRLVFLVAFK	10	Unmodified	_DRLVFLVAFK_					0	0	0			REV__ENST00000531489.1_1_11:34356761-34356935:-|nuORF	REV__ENST00000531489.1_1_11:34356761-34356935:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3673095703125	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.54	1	117.52	117.02	118.02	-0.02433								0	0	0	0.45132	1	13012	13012		14.137	0	1		+		5095	28304	3508	3511	5663	5663					0.11739143707814037
DRNMERLR	8	Unmodified	_DRNMERLR_					0	0	0			REV__nc|ENSG00000116852|O75037-3|KIF21B	REV__nc|ENSG00000116852|O75037-3|KIF21B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.8275146484375	2	545.282731	1088.55091	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.201	1	72.238	71.738	72.738	0.037148								0	0	0	0.30712	1	6865	6865		49.442	1.5259	1		+		5096	18229	3509	3512	5664	5664					0.010176514030945327
DRPAGTTVVLI	11	Unmodified	_DRPAGTTVVLI_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3319091796875	2	571.332413	1140.65027	0.55864	0.00031917	-3.1127	-0.0017784	-2.554	-0.0014592	571.3306168800059	102.04	2.573	102.24	101.51	104.08	0.19484					133	63	4	0	0	0	0.61369	1	10822	10822		42.864	8.9426	1	4021100			5097	4602	3510	3513	5665	5665					0.08557372568861865
DRPAGTTVVLI	11	Unmodified	_DRPAGTTVVLI_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	571.332413	1140.65027	3.1647	0.0018081	-5.7637	-0.003293	-2.599	-0.0014849	571.329239729347	102.04	1.2274	102.36	101.73	102.96	0.31452	0.036114	-0.00286	NaN	42.864	55	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	633240			5098	4602	3510	3513							0.08557372568861865
DRPLDSLSI	9	Unmodified	_DRPLDSLSI_					0	0	0			REV__ENST00000377918.7_1_13:58206088-58206214:+|nuORF	REV__ENST00000377918.7_1_13:58206088-58206214:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.27337646484375	2	508.274564	1014.53457	1.283	0.00065209	-1.1418	-0.00058037	0.14111	7.1723E-05	508.7755670844352	31.83	0.59983	31.937	31.675	32.274	0.10707					28	13	3	0	0	0	0.74721	1	2201	2201		37.159	2.9866	1	252220	+		5099	25878	3511	3514	5666	5666					0.027888487180121047
DRPLDSLSI	9	Unmodified	_DRPLDSLSI_					0	0	0			REV__ENST00000377918.7_1_13:58206088-58206214:+|nuORF	REV__ENST00000377918.7_1_13:58206088-58206214:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	508.274564	1014.53457	0.41743	0.00021217	5.2791	0.0026832	5.6965	0.0028954	508.2785150097277	31.627	0.09914	31.61	31.561	31.66	-0.017466	-0.24173	0.0013779	NaN	37.159	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32064	+		5100	25878	3511	3514							0.027888487180121047
DRPVPIIFV	9	Unmodified	_DRPVPIIFV_					0	0	0		nc|ENSG00000092529|P20807-3|CAPN3	nc|ENSG00000092529|P20807-3|CAPN3	nc|ENSG00000092529|P20807-3|CAPN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.314453125	2	528.316035	1054.61752	-0.63246	-0.00033414	-2.9689	-0.0015685	-3.6013	-0.0019026	528.3145655024048	98.746	1.1121	98.746	98.15	99.262	0					55	27	3	0	0	0	0.74721	1	9941	9941		37.159	5.2042	1	337340			5101	14800	3512	3515	5667	5667					0.09239210236660256
DRPVVRYLLE	10	Unmodified	_DRPVVRYLLE_					0	0	0			REV__ENSG00000203697|ENST00000366872|CAPN8	REV__ENSG00000203697|ENST00000366872|CAPN8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.5752868652344	3	420.575067	1258.70337	-0.87872	-0.00036957	1.7212	0.00072391	0.84251	0.00035434	420.57568384090274	46.88	0.74535	46.852	46.55	47.295	-0.027752					51	18	4	0	0	0	0.86549	1	3890	3890		29.551	1.9068	1	789730	+		5102	23436	3513	3516	5668	5668					0.08436750351506817
DRQRLTTV	8	Unmodified	_DRQRLTTV_					0	0	0		nc|ENSG00000196235|O00267-2|SUPT5H;ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF	nc|ENSG00000196235|O00267-2|SUPT5H	nc|ENSG00000196235|O00267-2|SUPT5H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7802734375	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.82658	1	8485	8485		21.96	0.25755	1	569520			5103	8031	3514	3517	5669	5669					0.05187090531978811
DRRGIAVL	8	Unmodified	_DRRGIAVL_					0	0	0			REV__nc|ENSG00000166839|Q495B1-2|ANKDD1A	REV__nc|ENSG00000166839|Q495B1-2|ANKDD1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2752380371094	2	450.274701	898.534849	1.3502	0.00060798	-1.5153	-0.00068229	-0.16504	-7.4311E-05	450.2740564660656	112.56	0.39562	112.59	112.42	112.81	0.030602					22	15	2	0	0	0	0.80706	1	13630	13630		19.36	1.0356	1	71369	+		5104	21329	3515	3518	5670	5670					0.08152313228504227
DRRLAVTN	8	Unmodified	_DRRLAVTN_					0	0	0		ENST00000474610.1_1_2:33952107-33952842:-|nuORF	ENST00000474610.1_1_2:33952107-33952842:-|nuORF	ENST00000474610.1_1_2:33952107-33952842:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.76678466796875	2	472.76724	943.519927	-1.1355	-0.00053681	1.1341	0.00053614	-0.0014011	-6.6241E-07	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.89494	1	7801	7801		37.159	1.5408	1	292450			5105	12307	3516	3519	5671	5671					0.04590821360500286
DRRRRDKFRRE	11	Unmodified	_DRRRRDKFRRE_					0	0	0		nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT	nc|ENSG00000087087|Q9BXP5-4|SRRT	nc|ENSG00000087087|Q9BXP5-4|SRRT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.63232421875	3	530.632972	1588.87709	0.2751	0.00014598	1.1453	0.00060772	1.4204	0.0007537	530.6336077917714	38.923	0.74314	39.011	38.684	39.427	0.088375					40	20	3	0	0	0	0.77511	1	2356	2356		16.53	4.097	1	323340			5106	1566	3517	3520	5672	5672					0.1062034890032919
DRRRRDKFRRE	11	Unmodified	_DRRRRDKFRRE_					0	0	0		nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT	nc|ENSG00000087087|Q9BXP5-4|SRRT	nc|ENSG00000087087|Q9BXP5-4|SRRT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.9656982421875	3	530.632972	1588.87709	0.26126	0.00013863	0.99147	0.0005261	1.2527	0.00066474	530.6332780122804	38.087	0.63107	38.029	37.743	38.374	-0.057915					38	19	3	0	0	0	0.8498	1	2230	2230		6.001	0.30226	1	144660			5107	1566	3517	3520	5673	5673					0.1062034890032919
DRRRRDKFRRE	11	Unmodified	_DRRRRDKFRRE_					0	0	0		nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT	nc|ENSG00000087087|Q9BXP5-4|SRRT	nc|ENSG00000087087|Q9BXP5-4|SRRT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.6329956054688	3	530.632972	1588.87709	0.22672	0.0001203	1.068	0.00056672	1.2947	0.00068702	530.6335626505213	39.05	0.59222	38.997	38.674	39.266	-0.052727					43	17	3	0	0	0	0.78683	1	2336	2336		14.086	4.4399	1	338380			5108	1566	3517	3520	5674	5674					0.1062034890032919
DRRRWNFRQKL	11	Unmodified	_DRRRWNFRQKL_					0	0	0		ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	525.6299438476562	3	525.63068	1573.87021	-1.7853	-0.00093843	-1.3305	-0.00069936	-3.1159	-0.0016378	525.630099752315	19.204	0.44818	19.204	19.016	19.464	0					29	14	3	0	0	0	0.74022	1	391	391		24.232	17.911	1	70348			5109	11865	3518	3521	5675	5675					0.1062303601977419
DRRRWNFRQKL	11	Unmodified	_DRRRWNFRQKL_					0	0	0		ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	525.63068	1573.87021	1.0593	0.00055681	-4.0057	-0.0021055	-2.9464	-0.0015487	525.6286030975202	19.19	0.31118	19.264	19.049	19.36	0.073465	0.018479	-0.0023305	NaN	24.232	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22607			5110	11865	3518	3521							0.1062303601977419
DRRRWNFRQKL	11	Unmodified	_DRRRWNFRQKL_					0	0	0		ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	525.63068	1573.87021	0.96509	0.00050728	-4.176	-0.002195	-3.2109	-0.0016877	525.9629493913392	19.585	0.23402	19.515	19.398	19.632	-0.070013	0.27031	-0.0025989	NaN	24.232	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17523			5111	11865	3518	3521							0.1062303601977419
DRRRWNFRQKL	11	Unmodified	_DRRRWNFRQKL_					0	0	0		ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	525.63068	1573.87021	-0.2671	-0.0001404	-2.4628	-0.0012945	-2.7299	-0.0014349	525.629353025901	19.209	0.38481	19.252	19.108	19.492	0.043749	0.0072334	0.0001026	NaN	24.232	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66824			5112	11865	3518	3521							0.1062303601977419
DRRRWNFRQKL	11	Unmodified	_DRRRWNFRQKL_					0	0	0		ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	525.63068	1573.87021	0.10643	5.5944E-05	-2.5922	-0.0013626	-2.4858	-0.0013066	525.6290622958333	19.068	0.31467	19.138	18.965	19.28	0.070713	-0.10677	-0.00010157	NaN	24.232	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92003			5113	11865	3518	3521							0.1062303601977419
DRRRWNFRQKL	11	Unmodified	_DRRRWNFRQKL_					0	0	0		ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	ENST00000448841.5_1_10:104575113-104575296:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	525.63068	1573.87021	0.85389	0.00044883	-3.9022	-0.0020511	-3.0483	-0.0016023	525.6288355520397	19.121	0.46461	19.097	18.826	19.29	-0.023342	-0.14778	-0.0021672	NaN	24.232	41	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92117			5114	11865	3518	3521							0.1062303601977419
DRRRWWVRVFR	11	Unmodified	_DRRRWWVRVFR_					0	0	0			REV__ENST00000477680.5_1_7:4815294-4829561:+|nuORF	REV__ENST00000477680.5_1_7:4815294-4829561:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.3327026367188	3	544.64292	1630.90693	0.91302	0.00049727	3.0495	0.0016609	3.9625	0.0021582	544.6443078863877	98.177	0.53725	98.563	98.22	98.758	0.38548					15	12	2	0	0	0	0.18293	1	11778	11778		8.0344	2.3356	1	69262	+		5115	27364	3519	3522	5676	5676					0.11671332636296938
DRRSLRLH	8	Unmodified	_DRRSLRLH_					0	0	0			REV__ENST00000262947.7_1_19:4668610-4668646:-|nuORF	REV__ENST00000262947.7_1_19:4668610-4668646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.8081665039062	2	526.807231	1051.59991	-0.10054	-5.2966E-05	1.6997	0.0008954	1.5991	0.00084244	526.80805153199	100.65	1.7806	100.86	100.42	102.2	0.21511					97	42	4	0	0	0	0.79403	1	10569	10569		63.306	2.3343	1	2744500	+		5116	24435	3520	3523	5677	5677					0.07617307754367175
DRRSLRLH	8	Unmodified	_DRRSLRLH_					0	0	0			REV__ENST00000262947.7_1_19:4668610-4668646:-|nuORF	REV__ENST00000262947.7_1_19:4668610-4668646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8079223632812	2	526.807231	1051.59991	2.0214	0.0010649	-1.5737	-0.00082904	0.44768	0.00023584	526.8066755630937	97.885	1.3091	98.27	97.24	98.549	0.38548					64	31	4	0	0	0	0.3646	2	11784	11772;11784		85.359	11.385	1	2611300	+		5117	24435	3520	3523	5678;5679	5679					0.07617307754367175
DRRSLRLH	8	Unmodified	_DRRSLRLH_					0	0	0			REV__ENST00000262947.7_1_19:4668610-4668646:-|nuORF	REV__ENST00000262947.7_1_19:4668610-4668646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8082885742188	2	526.807231	1051.59991	2.1591	0.0011374	-1.7045	-0.00089792	0.45462	0.00023949	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.67263	1	12269	12269		68.485	2.0554	1	36320000	+		5118	24435	3520	3523	5680	5680					0.07617307754367175
DRRSLRLH	8	Unmodified	_DRRSLRLH_					0	0	0			REV__ENST00000262947.7_1_19:4668610-4668646:-|nuORF	REV__ENST00000262947.7_1_19:4668610-4668646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8078002929688	2	526.807231	1051.59991	1.4964	0.00078833	-1.0075	-0.00053077	0.48892	0.00025757	526.8069621242416	97.94	1.6392	98.317	97.185	98.824	0.37678					70	34	4	0	0	0	0.79403	2	11859	11823;11859		63.306	1.0902	1	2595400	+		5119	24435	3520	3523	5681;5682	5682					0.07617307754367175
DRRSLRLH	8	Unmodified	_DRRSLRLH_					0	0	0			REV__ENST00000262947.7_1_19:4668610-4668646:-|nuORF	REV__ENST00000262947.7_1_19:4668610-4668646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8082885742188	2	526.807231	1051.59991	2.4511	0.0012913	-1.9686	-0.001037	0.48256	0.00025421	526.8063545435555	100.49	2.2675	100.83	100.38	102.64	0.34591					144	58	4	0	0	0	0.67263	2	12163	12163;12337		68.485	2.0554	1	37709000	+		5120	24435	3520	3523	5683;5684	5683					0.07617307754367175
DRRTELAK	8	Unmodified	_DRRTELAK_					0	0	0		ENST00000490762.5_1_16:240794-277276:-|nuORF;nc|ENSG00000007392|Q9NQ29-2|LUC7L;nc|ENSG00000007392|Q9NQ29-3|LUC7L;ENSG00000007392|ENST00000293872|LUC7L	ENST00000490762.5_1_16:240794-277276:-|nuORF	ENST00000490762.5_1_16:240794-277276:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.78045654296875	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.90089	1	8544	8544		39.253	11.371	1	569520			5121	727	3521	3524	5685	5685					0.051870905319901794
DRRVQITG	8	Unmodified	_DRRVQITG_					0	0	0		ENST00000377102.5_1_13:80913253-80913610:-|nuORF	ENST00000377102.5_1_13:80913253-80913610:-|nuORF	ENST00000377102.5_1_13:80913253-80913610:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7674865722656	2	472.76724	943.519927	-0.93004	-0.00043969	0.85085	0.00040225	-0.079188	-3.7437E-05	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.92457	1	8006	8006		47.916	5.5195	1	526610			5122	10827	3522	3525	5686	5686					0.04590821360523023
DRSTLDSKLQ	10	Unmodified	_DRSTLDSKLQ_					0	0	0			REV__ENSG00000144395|ENST00000389175|CCDC150	REV__ENSG00000144395|ENST00000389175|CCDC150	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.8036499023438	2	581.806759	1161.59897	-1.3384	-0.00077869	-3.8411	-0.0022348	-5.1795	-0.0030135	581.804412877013	64.652	1.1795	64.679	64.1	65.279	0.027138					99	35	4	0	0	0	0.31985	1	6076	6076		70.816	2.0294	1	1830900	+		5123	19886	3523	3526	5687	5687					0.024630038041323132
DRTTLFYTPQ	10	Unmodified	_DRTTLFYTPQ_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|13|1|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|13|1|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|13|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3131103515625	2	621.311677	1240.6088	-0.48748	-0.00030287	3.7448	0.0023267	3.2573	0.0020238	621.3138017387486	68.778	0.94327	68.741	68.457	69.4	-0.036301					71	37	3	0	0	0	0.57305	1	6667	6667		51.528	9.1316	1	439870			5124	14688	3524	3527	5688	5688					-0.0018780819050334685
DRVAELHRLL	10	Unmodified	_DRVAELHRLL_					0	0	0		ENST00000464285.5_1_20:25434089-25439234:-|nuORF;nc|ENSG00000101004|Q9Y2I6-2|NINL;ENSG00000101004|ENST00000278886|NINL	ENST00000464285.5_1_20:25434089-25439234:-|nuORF	ENST00000464285.5_1_20:25434089-25439234:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3528442382812	2	611.356754	1220.69895	-0.25906	-0.00015838	-0.90242	-0.0005517	-1.1615	-0.00071008	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.8545	1	9295	9295		36.447	3.6962	1	3360200			5125	1893	3525	3528	5689	5689					0.09743285928584555
DRVAELHRLL	10	Unmodified	_DRVAELHRLL_					0	0	0		ENST00000464285.5_1_20:25434089-25439234:-|nuORF;nc|ENSG00000101004|Q9Y2I6-2|NINL;ENSG00000101004|ENST00000278886|NINL	ENST00000464285.5_1_20:25434089-25439234:-|nuORF	ENST00000464285.5_1_20:25434089-25439234:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3519287109375	2	611.356754	1220.69895	2.1766	0.0013307	-3.4744	-0.0021241	-1.2977	-0.00079338	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.70553	1	10135	10135		44.377	3.599	1	5823000			5126	1893	3525	3528	5690	5690					0.09743285928584555
DRVAELHRLL	10	Unmodified	_DRVAELHRLL_					0	0	0		ENST00000464285.5_1_20:25434089-25439234:-|nuORF;nc|ENSG00000101004|Q9Y2I6-2|NINL;ENSG00000101004|ENST00000278886|NINL	ENST00000464285.5_1_20:25434089-25439234:-|nuORF	ENST00000464285.5_1_20:25434089-25439234:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3538208007812	2	611.356754	1220.69895	0.21558	0.0001318	-1.4776	-0.00090335	-1.262	-0.00077155	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.54701	1	10014	10014		52.937	6.9645	1	5379900			5127	1893	3525	3528	5691	5691					0.09743285928584555
DRVKRITMA	9	Unmodified	_DRVKRITMA_					0	0	0		nc|ENSG00000140563|Q6DN12-3|MCTP2;ENST00000456504.5_1_15:94858078-95022260:+|nuORF;ENSG00000140563|ENST00000357742|MCTP2;nc|ENSG00000140563|Q6DN12-2|MCTP2;nc|ENSG00000140563|Q6DN12-4|MCTP2;chr15:94402019-94402486|53|211.72|0.71|8.23|+|ENST00000557742|MCTP2,MCTP2	nc|ENSG00000140563|Q6DN12-3|MCTP2	nc|ENSG00000140563|Q6DN12-3|MCTP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3169555664062	2	545.3135	1088.61245	1.9901	0.0010853	3.8799	0.0021158	5.87	0.003201	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.73802	3	9096	9096;9118;9144		37.812	3.639	1	4704900			5128	4448	3526	3529	5692;5693;5694	5692					0.07168583102384218
DRVLFKQL	8	Unmodified	_DRVLFKQL_					0	0	0			REV__ENST00000321437.8_1_15:63558938-63559025:+|nuORF	REV__ENST00000321437.8_1_15:63558938-63559025:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8036193847656	2	509.805834	1017.59712	0.31699	0.0001616	-4.4775	-0.0022826	-4.1605	-0.002121	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.90983	1	10245	10245		42.396	1.618	1	2635100	+		5129	25011	3527	3530	5695	5695					0.08902039576844345
DRVLLSSSISA	11	Unmodified	_DRVLLSSSISA_					0	0	0			REV__nc|ENSG00000123096|Q14714-2|SSPN	REV__nc|ENSG00000123096|Q14714-2|SSPN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3189086914062	2	574.319502	1146.62445	-1.3729	-0.0007885	1.3449	0.0007724	-0.028038	-1.6103E-05	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.61369	1	9527	9527		42.864	2.8061	1	1586900	+		5130	18525	3528	3531	5696	5696					0.057004783265938386
DRVLQIVRLDL	11	Unmodified	_DRVLQIVRLDL_					0	0	0			REV__ENSG00000122863|ENST00000373115|CHST3	REV__ENSG00000122863|ENST00000373115|CHST3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.2732849121094	3	447.273388	1338.79833	-1.7854	-0.00079855	1.2257	0.00054822	-0.55967	-0.00025032	447.27387124439326	107.85	0.39288	107.89	107.58	107.97	0.036125					35	9	5	0	0	0	0.73647	1	11516	11516		25.068	5.8051	1	27978000	+		5131	18518	3529	3532	5697	5697					0.14248683822711428
DRVLRPAS	8	Unmodified	_DRVLRPAS_					0	0	0			REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.26373291015625	2	457.264333	912.514114	-1.2803	-0.00058543	1.4305	0.00065413	0.15023	6.8693E-05	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.90523	1	7344	7344		40.778	1.972	1	812040	+		5132	26568	3530	3533	5698	5698					0.054357228488470355
DRVLRPAS	8	Unmodified	_DRVLRPAS_					0	0	0			REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2632141113281	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.91472	1	7986	7986		44.117	1.6423	1	2957200	+		5133	26568	3530	3533	5699	5699					0.054357228488470355
DRVLRPAS	8	Unmodified	_DRVLRPAS_					0	0	0			REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2638244628906	2	457.264333	912.514114	-0.13162	-6.0186E-05	0.19173	8.7669E-05	0.060104	2.7483E-05	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.89043	1	7780	7780		35.618	2.1027	1	1194000	+		5134	26568	3530	3533	5700	5700					0.054357228488470355
DRVLRPAS	8	Unmodified	_DRVLRPAS_					0	0	0			REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2631530761719	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.86677	1	8190	8190		27.882	0	1	4885100	+		5135	26568	3530	3533	5701	5701					0.054357228488470355
DRVLRPAS	8	Unmodified	_DRVLRPAS_					0	0	0			REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2639465332031	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.86677	1	7857	7857		27.882	0	1	1458600	+		5136	26568	3530	3533	5702	5702					0.054357228488470355
DRVLRPAS	8	Unmodified	_DRVLRPAS_					0	0	0			REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26336669921875	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.86677	5	7733	7733;7932;7944;8160;8185		37.812	7.3079	1	4732500	+		5137	26568	3530	3533	5703;5704;5705;5706;5707	5703					0.054357228488470355
DRVLRPAS	8	Unmodified	_DRVLRPAS_					0	0	0			REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2640686035156	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.88185	1	7943	7943		32.812	0.85756	1	4597500	+		5138	26568	3530	3533	5708	5708					0.054357228488470355
DRVLRPAS	8	Unmodified	_DRVLRPAS_					0	0	0			REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26422119140625	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.8537	2	7902	7793;7902		37.812	3.639	1	4061400	+		5139	26568	3530	3533	5709;5710	5710					0.054357228488470355
DRVLRPAS	8	Unmodified	_DRVLRPAS_					0	0	0			REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.263916015625	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.86677	5	9529	9300;9446;9493;9529;9553		40.778	7.364	1	3505500	+		5140	26568	3530	3533	5711;5712;5713;5714;5715	5714					0.054357228488470355
DRVLRPAS	8	Unmodified	_DRVLRPAS_					0	0	0			REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2641296386719	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.86677	5	9575	9455;9468;9479;9575;9612		49.442	12.282	1	4402400	+		5141	26568	3530	3533	5716;5717;5718;5719;5720	5719					0.054357228488470355
DRVNLRKHL	9	Unmodified	_DRVNLRKHL_					0	0	0		ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8425903320312	2	575.843813	1149.67307	1.9391	0.0011166	-3.5988	-0.0020723	-1.6596	-0.00095569	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.77244	1	9808	9808		32.812	1.2826	1	5986700			5142	3698	3531	3534	5721	5721					0.10422436476983421
DRVNLRKHL	9	Unmodified	_DRVNLRKHL_					0	0	0		ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8429565429688	2	575.843813	1149.67307	0.78302	0.0004509	-2.2721	-0.0013084	-1.4891	-0.0008575	575.8423757005949	90.383	2.7025	90.537	88.725	91.427	0.15388					214	64	4	0	0	0	0.69624	1	9129	9129		40.778	1.5253	1	2399100			5143	3698	3531	3534	5722	5722					0.10422436476983421
DRVPNVRVLLA	11	Unmodified	_DRVPNVRVLLA_					0	0	0		ENST00000582594.5_1_18:9547789-9550464:-|nuORF;ENST00000285124.12_1_18:9547789-9562973:-|nuORF;nc|ENSG00000154845|Q8TF05-2|PPP4R1;ENSG00000154845|ENST00000400556|PPP4R1	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3800048828125	2	626.380229	1250.7459	-0.052521	-3.2898E-05	-1.0676	-0.00066873	-1.1201	-0.00070162	626.37954025277	107.79	0.47346	107.79	107.4	107.87	0					35	11	4	0	0	0	0.67778	1	11182	11182		35.152	1.2304	1	13895000			5144	5301	3532	3535	5723	5723					0.13056145479754377
DRVQNKLRPL	10	Unmodified	_DRVQNKLRPL_					0	0	0			REV__ENSG00000198707|ENST00000552810|CEP290	REV__ENSG00000198707|ENST00000552810|CEP290	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8696899414062	2	619.870028	1237.7255	-1.2246	-0.00075908	0.04402	2.7286E-05	-1.1806	-0.0007318	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.86218	1	9557	9557		32.812	1.2826	1	3118800	+		5145	23359	3533	3536	5724	5724					0.11614974819917734
DRVRRGDDLR	10	Unmodified	_DRVRRGDDLR_					0	0	0			REV__ENSG00000010322|ENST00000345716|NISCH	REV__ENSG00000010322|ENST00000345716|NISCH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.8992004394531	3	419.897203	1256.66978	-0.2186	-9.179E-05	2.7792	0.001167	2.5606	0.0010752	419.8985626522357	28.279	0.91564	28.182	27.796	28.711	-0.096947					45	21	3	0	0	0	0.74383	1	1690	1690		42.338	18.96	1	105270	+		5146	16165	3534	3537	5725	5725					0.05171141632308718
DRVSQARR	8	Unmodified	_DRVSQARR_					0	0	0		ENST00000330292.4_17:80208760-80208973:+|nuORF	ENST00000330292.4_17:80208760-80208973:+|nuORF	ENST00000330292.4_17:80208760-80208973:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.27716064453125	2	494.275764	986.536974	-1.4854	-0.00073421	3.6227	0.0017906	2.1373	0.0010564	494.2776697703326	30.367	0.75211	30.395	29.964	30.716	0.028618					45	16	5	0	0	0	0.91982	1	2002	2002		45.972	3.4978	1	402990			5147	10110	3535	3538	5726	5726					0.043167419663291184
DRVTGRLL	8	Unmodified	_DRVTGRLL_					0	0	0		ENST00000544718.1_1_12:132403795-132404230:+|nuORF	ENST00000544718.1_1_12:132403795-132404230:+|nuORF	ENST00000544718.1_1_12:132403795-132404230:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.27978515625	2	465.279983	928.545414	1.2805	0.00059581	-1.2104	-0.00056316	0.070176	3.2652E-05	465.27931677409214	88.976	2.3969	88.903	88.477	90.874	-0.07238					118	56	4	0	0	0	0.8621	1	9269	9269		26.693	1.2427	1	1648000			5148	13571	3536	3539	5727	5727					0.07828295882939074
DRVVPLFSL	9	Unmodified	_DRVVPLFSL_					0	0	0			REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|2|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|27	REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|2|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|27	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035888671875	2	523.305667	1044.59678	-0.7542	-0.00039468	-3.0063	-0.0015732	-3.7605	-0.0019679	523.3039964981095	91.826	2.332	91.826	91.507	93.839	0					135	53	3	0	0	0	0.6204	1	9008	9008		45.972	3.5761	1	769560	+		5149	15525	3537	3540	5728	5728					0.0762661985700106
DRVVPLFSL	9	Unmodified	_DRVVPLFSL_					0	0	0			REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|2|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|27	REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|2|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3035278320312	2	523.305667	1044.59678	-0.041134	-2.1526E-05	-3.7481	-0.0019614	-3.7892	-0.0019829	523.30361738985	91.645	2.4487	91.714	91.431	93.88	0.06987					99	57	2	0	0	0	0.6204	1	9499	9499		45.972	9.5255	1	1067500	+		5150	15525	3537	3540	5729	5729					0.0762661985700106
DRVVPLFSL	9	Unmodified	_DRVVPLFSL_					0	0	0			REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|2|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|27	REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|2|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|27	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.66686	2	8895	8895;8968		42.864	8.9426	1	12189000	+		5151	15525	3537	3540	5730;5731	5730					0.0762661985700106
DRVVPLFSL	9	Unmodified	_DRVVPLFSL_					0	0	0			REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|2|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|27	REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|2|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3032836914062	2	523.305667	1044.59678	-0.50611	-0.00026485	-3.5572	-0.0018615	-4.0633	-0.0021264	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.66686	2	10206	10052;10206		42.864	8.6917	1	3970100	+		5152	15525	3537	3540	5732;5733	5733					0.0762661985700106
DRVVPLFSL	9	Unmodified	_DRVVPLFSL_					0	0	0			REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|2|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|27	REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|2|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3035888671875	2	523.305667	1044.59678	-1.0823	-0.0005664	-2.8643	-0.0014989	-3.9466	-0.0020653	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.73802	2	10342	10342;10885		37.812	2.5316	1	13160000	+		5153	15525	3537	3540	5734;5735	5734					0.0762661985700106
DRWITCKSLQ	10	Unmodified	_DRWITCKSLQ_					0	0	0		nc|ENSG00000184307|Q8IYP9|ZDHHC23;ENSG00000184307|ENST00000638807|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	625.32177734375	2	625.321522	1248.62849	-0.24573	-0.00015366	-2.299	-0.0014376	-2.5447	-0.0015913	625.3199751264785	64.714	1.3394	64.719	64.245	65.584	0.0046997					92	46	4	0	0	0	0.49268	1	6081	6081		56.434	6.8977	1	486230			5154	7599	3538	3541	5736	5736					0.014122445486236757
DRWITCKSLQ	10	Unmodified	_DRWITCKSLQ_					0	0	0		nc|ENSG00000184307|Q8IYP9|ZDHHC23;ENSG00000184307|ENST00000638807|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.3207397460938	2	625.321522	1248.62849	-0.68478	-0.00042821	-1.9062	-0.001192	-2.5909	-0.0016202	625.3201576946594	64.459	1.2974	64.486	64.064	65.361	0.027138					89	41	4	0	0	0	0.27582	1	6069	6069		75.043	2.1641	1	457250			5155	7599	3538	3541	5737	5737					0.014122445486236757
DRWKFFEETSK	11	Unmodified	_DRWKFFEETSK_					0	0	0		ENSG00000146950|ENST00000380913|SHROOM2	ENSG00000146950|ENST00000380913|SHROOM2	ENSG00000146950|ENST00000380913|SHROOM2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79620361328125	3	491.577136	1471.70958	-0.081177	-3.9905E-05	2.9495	0.0014499	2.8683	0.00141	491.91301994492443	67.04	0.49016	67.056	66.752	67.242	0.016205					36	21	2	0	0	0	0.17835	1	6262	6262		11.932	0	1	90870			5156	4872	3539	3542	5738	5738					-0.007407762076354629
DRWNKQLI	8	Unmodified	_DRWNKQLI_					0	0	0			REV__nc|ENSG00000166938|Q8TF46-2|DIS3L	REV__nc|ENSG00000166938|Q8TF46-2|DIS3L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7989501953125	2	536.79854	1071.58253	0.13037	6.9984E-05	1.1246	0.0006037	1.255	0.00067368	536.7974000429033	56.942	0.95939	57.497	57.006	57.965	0.55513					55	22	4	0	0	0	0.93293	1	5932	5932		51.335	1.7994	1	1016200	+		5157	21341	3540	3543	5739	5739					0.04959967428703749
DRWRFYWKMVY	11	Unmodified	_DRWRFYWKMVY_					0	0	0		ENSG00000206579|ENST00000327381|XKR4	ENSG00000206579|ENST00000327381|XKR4	ENSG00000206579|ENST00000327381|XKR4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.6017456054688	3	550.606373	1648.79729	-1.5741	-0.00086674	-4.3897	-0.002417	-5.9639	-0.0032837	550.6038872801544	26.083	0.59474	26.083	25.871	26.466	0					67	25	4	0	0	0	0.8398	1	970	970		6.6596	3.2509	1	207780			5158	8564	3541	3544	5740	5740					-0.001158538178742674
DRYRDSDY	8	Unmodified	_DRYRDSDY_					0	0	0			REV__nc|ENSG00000063046|P23588-2|EIF4B	REV__nc|ENSG00000063046|P23588-2|EIF4B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.22607421875	2	545.233427	1088.4523	-1.1678	-0.00063672	-2.4444	-0.0013328	-3.6122	-0.0019695	545.232007279963	55.929	0.43286	55.929	55.662	56.095	0					19	11	2	0	0	0	0.91977	1	4780	4780		45.952	10.334	1	89972	+		5159	16467	3542	3545	5741	5741					-0.08838673360946814
DSARKIKPKPQ	11	Unmodified	_DSARKIKPKPQ_					0	0	0		nc|ENSG00000048342|Q9P2K1-2|CC2D2A;ENSG00000048342|ENST00000424120|CC2D2A;ENST00000514450.2_1_4:15471657-15513157:+|nuORF;ENST00000513811.5_1_4:15471657-15545375:+|nuORF	nc|ENSG00000048342|Q9P2K1-2|CC2D2A	nc|ENSG00000048342|Q9P2K1-2|CC2D2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3753051757812	2	634.377686	1266.74082	2.2045	0.0013985	-3.4604	-0.0021952	-1.2558	-0.00079667	634.3753873618351	111.94	0.24531	111.98	111.85	112.1	0.041832					13	7	2	0	0	0	0.74763	1	13530	13530		22.58	1.6327	1	525050			5160	973	3543	3546	5742	5742					0.11811841617145546
DSATQLKESI	10	Unmodified	_DSATQLKESI_					0	0	0			REV__nc|ENSG00000197694|Q13813-3|SPTAN1	REV__nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8407592773438	2	546.282586	1090.55062	0.96659	0.00052803	2.339	0.0012778	3.3056	0.0018058	546.2835781191435	100.2	0.32117	100.53	100.44	100.76	0.33295					12	7	2	0	0	0	0.37624	1	12154	12154		21.686	0	1	75900	+		5161	23259	3544	3547	5743	5743					0.008965101642388618
DSDEKMETHF	10	Unmodified	_DSDEKMETHF_					0	0	0			REV__ENST00000598164.2_1_19:40172096-40174784:+|nuORF	REV__ENST00000598164.2_1_19:40172096-40174784:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.7515258789062	2	619.753335	1237.49212	0.63076	0.00039091	-3.3755	-0.0020919	-2.7447	-0.001701	619.7510263476051	94.34	0.69038	94.775	94.514	95.204	0.43539					41	17	3	0	0	0	0.82886	1	11302	11302		37.812	3.639	1	1516200	+		5162	26383	3545	3548	5744	5744					-0.11712914472536795
DSDPAQPCEA	10	Unmodified	_DSDPAQPCEA_					0	0	0			REV__ENST00000494080.5_1_11:64109984-64120281:+|nuORF	REV__ENST00000494080.5_1_11:64109984-64120281:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3135375976562	2	516.700571	1031.38659	2.7581	0.0014251	-2.3362	-0.0012071	0.42192	0.000218	516.6991055964389	99.25	0.2002	99.197	99.12	99.32	-0.053741					5	4	2	0	0	0	0.37624	1	10743	10743		27.882	10.517	1	90520	+		5163	27710	3546	3549	5745	5745					-0.12784830598161534
DSDPQSRPLLL	11	Unmodified	_DSDPQSRPLLL_					0	0	0		nc|ENSG00000215440|Q8NDH3-3|NPEPL1;nc|ENSG00000215440|Q8NDH3-2|NPEPL1;ENSG00000215440|ENST00000356091|NPEPL1	nc|ENSG00000215440|Q8NDH3-3|NPEPL1	nc|ENSG00000215440|Q8NDH3-3|NPEPL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.8336181640625	2	620.830234	1239.64592	0.34747	0.00021572	2.1983	0.0013647	2.5457	0.0015805	620.831501884774	61.24	0.7449	61.794	61.511	62.256	0.55386					46	19	3	0	0	0	0.39037	1	6543	6543		60.118	0	1	675170			5164	15254	3547	3550	5746	5746					0.035678633553061445
DSEDGSSDDDS	11	Unmodified	_DSEDGSSDDDS_					0	0	0			REV__chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS;REV__nc|ENSG00000087460|Q5JWF2-2|GNAS	REV__nc|ENSG00000087460|Q5JWF2-2|GNAS	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.6762084960938	2	564.676002	1127.33745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.5	1	112.47	111.97	112.97	-0.032333								0	0	0	0.56276	1	11999	11999		13.454	1.943	1		+		5165	15781;29717	3548	3551	5747	5747					-0.22112492144060525
DSFESIESY	9	Unmodified	_DSFESIESY_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-4|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.7241821289062	2	538.724569	1075.43459	-0.98524	-0.00053077	1.2276	0.00066136	0.2424	0.00013059	538.7250438414814	71.432	0.62085	71.817	71.503	72.124	0.38449					33	14	3	0	0	0	0.15928	3	7941	7941;7952;7965		82.305	8.3303	1	588160			5166	3973	3549	3552	5748;5749;5750	5748					-0.1001143340647559
DSFESIESY	9	Unmodified	_DSFESIESY_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-4|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7239990234375	2	538.724569	1075.43459	-0.54815	-0.0002953	0.61326	0.00033038	0.06511	3.5076E-05	538.7248489829792	71.283	0.70205	71.83	71.574	72.276	0.54756					45	16	4	0	0	0	0.55097	1	7972	7972		49.442	1.5259	1	688920			5167	3973	3549	3552	5751	5751					-0.1001143340647559
DSFIFARPR	9	Unmodified	_DSFIFARPR_					0	0	0			REV__ENST00000484945.5_1_3:75472114-75480048:-|nuORF	REV__ENST00000484945.5_1_3:75472114-75480048:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.7968139648438	2	554.79854	1107.58253	0.9008	0.00049976	-4.4429	-0.0024649	-3.5421	-0.0019651	554.7958908144287	26.927	0.75191	26.899	26.557	27.309	-0.027706					40	18	3	0	0	0	0.25483	1	1178	1178		68.787	10.541	1	237050	+		5168	26992	3550	3553	5752	5752					0.03303967428678334
DSFYLEIF	8	Unmodified	_DSFYLEIF_					0	0	0		nc|ENSG00000078902|Q9H0E2-2|TOLLIP;ENSG00000078902|ENST00000317204|TOLLIP	nc|ENSG00000078902|Q9H0E2-2|TOLLIP	nc|ENSG00000078902|Q9H0E2-2|TOLLIP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2643432617188	2	517.247483	1032.48041	-0.089262	-4.617E-05	-3.844	-0.0019883	-3.9333	-0.0020345	517.2452142213186	78.011	0.86869	78.574	78.295	79.163	0.56332					28	20	2	0	0	0	0.4196	1	8904	8904		18.324	0	1	149820			5169	1408	3551	3554	5753	5753					-0.03452743433604155
DSGAKKISVKT	11	Unmodified	_DSGAKKISVKT_					0	0	0		ENSG00000128849|ENST00000281282|CGNL1	ENSG00000128849|ENST00000281282|CGNL1	ENSG00000128849|ENST00000281282|CGNL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3294067382812	2	567.32987	1132.64519	-1.2006	-0.00068114	1.0133	0.00057488	-0.1873	-0.00010626	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.69248	1	9693	9693		32.751	3.5805	1	15673000			5170	3564	3552	3555	5754	5754					0.08417068706239661
DSGPLCCL	8	Unmodified	_DSGPLCCL_					0	0	0			REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.1701354980469	2	404.172407	806.330261	-1.8319	-0.00074042	-3.7939	-0.0015334	-5.6259	-0.0022738	404.17089024317255	78.364	3.0861	78.491	77.697	80.783	0.12695					160	99	2	0	0	0	0.86791	1	7359	7359		28.254	2.8041	1	7642900	+		5171	26621	3553	3556	5755	5755					-0.08065129968520068
DSGSLTLKDVQ	11	Unmodified	_DSGSLTLKDVQ_					0	0	0			REV__nc|ENSG00000132824|Q13530-2|SERINC3	REV__nc|ENSG00000132824|Q13530-2|SERINC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.8038940429688	2	581.801143	1161.58773	0.55662	0.00032384	4.184	0.0024342	4.7406	0.0027581	581.8034623871067	64.587	0.91196	64.711	64.307	65.219	0.12396					103	32	4	0	0	0	0.1214	1	5692	5692		88.177	9.9132	1	1348900	+		5172	19036	3554	3557	5756	5756					0.013401817100202607
DSHQDCDV	8	Unmodified	_DSHQDCDV_					0	0	0			REV__ENSG00000023318|ENST00000262455|ERP44	REV__ENSG00000023318|ENST00000262455|ERP44	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	459.2830505371094	2	459.666531	917.31851	-1.1768	-0.00054095	-1.3723	-0.00063079	-2.5491	-0.0011717	459.6658067993534	56.246	0.66079	56.318	55.745	56.406	0.071835					54	32	2	0	0	0	0.4196	1	4734	4734		10.265	3.5297	1	384230	+		5173	16249	3555	3558	5757	5757					-0.1434565545816895
DSHQDCDV	8	Unmodified	_DSHQDCDV_					0	0	0			REV__ENSG00000023318|ENST00000262455|ERP44	REV__ENSG00000023318|ENST00000262455|ERP44	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	459.666531	917.31851	-0.094008	-4.3212E-05	-2.6041	-0.001197	-2.6981	-0.0012402	459.6652791915647	56.316	0.839	56.305	55.575	56.414	-0.010136	0.06659	-0.00045214	NaN	10.265	42	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	670340	+		5174	16249	3555	3558							-0.1434565545816895
DSHQDCDV	8	Unmodified	_DSHQDCDV_					0	0	0			REV__ENSG00000023318|ENST00000262455|ERP44	REV__ENSG00000023318|ENST00000262455|ERP44	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	459.666531	917.31851	-0.35878	-0.00016492	-2.5212	-0.0011589	-2.88	-0.0013238	459.6653576606945	56.179	0.76556	56.152	55.431	56.196	-0.027279	-0.086826	-0.00037593	NaN	10.265	43	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	497310	+		5175	16249	3555	3558							-0.1434565545816895
DSHQDCDV	8	Unmodified	_DSHQDCDV_					0	0	0			REV__ENSG00000023318|ENST00000262455|ERP44	REV__ENSG00000023318|ENST00000262455|ERP44	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	459.666531	917.31851	-0.55434	-0.00025481	-2.1699	-0.00099742	-2.7242	-0.0012522	459.6655091082607	56.165	0.7033	56.196	55.594	56.297	0.030838	-0.04269	-5.2911E-05	NaN	10.265	36	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	538300	+		5176	16249	3555	3558							-0.1434565545816895
DSHSQEHH	8	Unmodified	_DSHSQEHH_					0	0	0			REV__ENSG00000198795|ENST00000361524|ZNF521	REV__ENSG00000198795|ENST00000361524|ZNF521	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.6983642578125	2	488.697012	975.379471	-0.93324	-0.00045607	2.0493	0.0010015	1.116	0.0005454	488.6983813235857	87.196	0.58092	87.65	87.304	87.885	0.4543					28	13	4	0	0	0	0.92457	1	10262	10262		47.916	12.297	1	475810	+		5177	23384	3556	3559	5758	5758					-0.10920382363713088
DSHSQEHH	8	Unmodified	_DSHSQEHH_					0	0	0			REV__ENSG00000198795|ENST00000361524|ZNF521	REV__ENSG00000198795|ENST00000361524|ZNF521	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	488.697012	975.379471	0.67314	0.00032896	1.9902	0.00097259	2.6633	0.0013016	488.69751446280407	87.689	0.42952	87.838	87.554	87.984	0.14956	0.11677	-0.0010607	NaN	47.916	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59344	+		5178	23384	3556	3559							-0.10920382363713088
DSHSQEHH	8	Unmodified	_DSHSQEHH_					0	0	0			REV__ENSG00000198795|ENST00000361524|ZNF521	REV__ENSG00000198795|ENST00000361524|ZNF521	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	488.697012	975.379471	-1.639	-0.00080097	3.6905	0.0018035	2.0515	0.0010025	488.69879386713853	87.507	0.43123	87.676	87.523	87.955	0.16923	-0.045394	0.00060119	NaN	47.916	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67977	+		5179	23384	3556	3559							-0.10920382363713088
DSHSQEHH	8	Unmodified	_DSHSQEHH_					0	0	0			REV__ENSG00000198795|ENST00000361524|ZNF521	REV__ENSG00000198795|ENST00000361524|ZNF521	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	488.697012	975.379471	-0.93324	-0.00045607	2.0493	0.0010015	1.116	0.0005454	488.6983813235857	87.196	0.58092	87.65	87.304	87.885	0.4543	-0.071381	-0.0010029	NaN	47.916	28	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	475810	+		5180	23384	3556	3559							-0.10920382363713088
DSILVLLSA	9	Unmodified	_DSILVLLSA_					0	0	0			REV__ENST00000541960.5_1_12:10366379-10366556:+|nuORF	REV__ENST00000541960.5_1_12:10366379-10366556:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7774658203125	2	465.778951	929.543348	-0.1189	-5.538E-05	-2.6882	-0.0012521	-2.8071	-0.0013075	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.76255	1	7856	7856		35.618	0.41757	1	345200	+		5181	28391	3557	3560	5759	5759					0.07575822354465345
DSILVLLSA	9	Unmodified	_DSILVLLSA_					0	0	0			REV__ENST00000541960.5_1_12:10366379-10366556:+|nuORF	REV__ENST00000541960.5_1_12:10366379-10366556:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7774963378906	2	465.778951	929.543348	-0.11871	-5.5291E-05	-2.8407	-0.0013231	-2.9594	-0.0013784	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.78983	1	8057	8057		27.882	3.3782	1	1083800	+		5182	28391	3557	3560	5760	5760					0.07575822354465345
DSIRIRAL	8	Unmodified	_DSIRIRAL_					0	0	0		ENST00000554481.1_1_15:91489865-91490237:+|nuORF;ENST00000556704.1_1_15:91490006-91491606:+|nuORF;nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A	ENST00000554481.1_1_15:91489865-91490237:+|nuORF	ENST00000554481.1_1_15:91489865-91490237:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2879943847656	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.884	1	11344	11344		33.516	0.70317	1	24731000			5183	4447	3558	3561	5761	5761					0.08748582400005489
DSKKQKVLDS	10	Unmodified	_DSKKQKVLDS_					0	0	0			REV__ENSG00000162105|ENST00000601538|SHANK2;REV__nc|ENSG00000162105|Q9UPX8-1|SHANK2	REV__nc|ENSG00000162105|Q9UPX8-1|SHANK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3194580078125	2	574.319502	1146.62445	-0.44784	-0.0002572	0.5081	0.00029181	0.060262	3.461E-05	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.85692	2	9377	9366;9377		36.318	0.69936	1	1099700	+		5184	20796;29973	3559	3562	5762;5763	5763					0.05700478326571101
DSKKQKVLDS	10	Unmodified	_DSKKQKVLDS_					0	0	0			REV__ENSG00000162105|ENST00000601538|SHANK2;REV__nc|ENSG00000162105|Q9UPX8-1|SHANK2	REV__nc|ENSG00000162105|Q9UPX8-1|SHANK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3187255859375	2	574.319502	1146.62445	0.81882	0.00047026	-0.83061	-0.00047704	-0.011797	-6.7755E-06	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.81117	1	9637	9637		38.754	3.6016	1	1866200	+		5185	20796;29973	3559	3562	5764	5764					0.05700478326571101
DSKRHLTPE	9	Unmodified	_DSKRHLTPE_					0	0	0		nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C;ENSG00000126012|ENST00000375401|KDM5C;ENST00000497100.5_1_X:53227940-53240837:-|nuORF	nc|ENSG00000126012|P41229-4|KDM5C	nc|ENSG00000126012|P41229-4|KDM5C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.8243408203125	2	541.783087	1081.55162	-0.069154	-3.7467E-05	-0.2606	-0.00014119	-0.32975	-0.00017865	541.7830075285477	33.319	0.67592	33.489	33.145	33.821	0.16971					26	15	3	0	0	0	0.20789	1	2373	2373		40.778	0	1	191530			5186	3437	3560	3563	5765	5765					0.014107693237974672
DSKSITTIKGK	11	Unmodified	_DSKSITTIKGK_					0	0	0		ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.342529296875	2	589.342978	1176.6714	-0.67475	-0.00039766	0.32554	0.00019186	-0.34921	-0.0002058	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.72106	1	9449	9449		28.081	2.5074	1	5429300			5187	4219	3561	3564	5766	5766					0.09013337877695449
DSLIRQTTGE	10	Unmodified	_DSLIRQTTGE_					0	0	0		ENSG00000186871|ENST00000334463|ERCC6L	ENSG00000186871|ENST00000334463|ERCC6L	ENSG00000186871|ENST00000334463|ERCC6L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.2902221679688	2	560.28566	1118.55677	0.42319	0.00023711	3.2516	0.0018218	3.6748	0.0020589	560.2873712822919	78.48	0.92073	78.426	78.068	78.989	-0.053558					67	24	4	0	0	0	0.57305	1	7795	7795		51.528	1.9917	1	844600			5188	7825	3562	3565	5767	5767					0.0022302839577150735
DSLLAEGAGL	10	Unmodified	_DSLLAEGAGL_					0	0	0		nc|ENSG00000067840|Q76G19-2|PDZD4;nc|ENSG00000067840|Q76G19|PDZD4;ENSG00000067840|ENST00000393758|PDZD4	nc|ENSG00000067840|Q76G19-2|PDZD4	nc|ENSG00000067840|Q76G19-2|PDZD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.24713134765625	2	473.248015	944.481476	-1.9871	-0.00094038	0.18846	8.9186E-05	-1.7986	-0.0008512	473.2482803218518	36.12	0.59232	36.13	35.797	36.389	0.0092773					18	12	2	0	0	0	0.86348	1	2332	2332		31.53	0	1	61041			5189	1189	3563	3566	5768	5768					0.00701470935348425
DSLLAEGAGL	10	Unmodified	_DSLLAEGAGL_					0	0	0		nc|ENSG00000067840|Q76G19-2|PDZD4;nc|ENSG00000067840|Q76G19|PDZD4;ENSG00000067840|ENST00000393758|PDZD4	nc|ENSG00000067840|Q76G19-2|PDZD4	nc|ENSG00000067840|Q76G19-2|PDZD4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	473.248015	944.481476	-0.044381	-2.1003E-05	-2.2303	-0.0010555	-2.2746	-0.0010765	473.24692037080297	36.192	0.45456	36.173	35.922	36.376	-0.018673	0.013278	-0.00113	NaN	31.53	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64090			5190	1189	3563	3566							0.00701470935348425
DSLLKLIE	8	Unmodified	_DSLLKLIE_					0	0	0			REV__nc|ENSG00000153815|Q8IY22-3|CMIP	REV__nc|ENSG00000153815|Q8IY22-3|CMIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7774963378906	2	465.778951	929.543348	-0.69238	-0.0003225	-2.1131	-0.00098422	-2.8054	-0.0013067	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.89962	1	9406	9406		38.806	0	1	927810	+		5191	20358	3564	3567	5769	5769					0.07575822354465345
DSLQNQYT	8	Unmodified	_DSLQNQYT_					0	0	0		ENST00000382038.6_1_5:34911808-34913609:-|nuORF;ENST00000325577.8_1_5:34911808-34914834:-|nuORF	ENST00000382038.6_1_5:34911808-34913609:-|nuORF	ENST00000382038.6_1_5:34911808-34913609:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7185974121094	2	484.719621	967.42469	-1.6647	-0.00080693	-1.1726	-0.0005684	-2.8374	-0.0013753	484.71886476647086	100.24	1.3318	100.42	99.843	101.18	0.17199					60	30	3	0	0	0	0.86677	1	10370	10370		27.882	1.1893	1	492530			5192	10071	3565	3568	5770	5770					-0.060325766211803966
DSLRSRAPM	9	Unmodified	_DSLRSRAPM_					0	0	0		ENSG00000076356|ENST00000367033|PLXNA2;ENST00000493546.1_1_X:153697446-153699024:+|nuORF;ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000076356|ENST00000367033|PLXNA2;ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000076356|ENST00000367033|PLXNA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8007202148438	2	516.766383	1031.51821	0.86331	0.00044613	-3.5528	-0.001836	-2.6895	-0.0013899	516.7619862061895	54.364	0.54477	54.771	54.488	55.032	0.40663					23	12	3	0	0	0	0.20789	1	5556	5556		68.787	4.5796	1	158630			5193	1356;3691	3566	3569	5771	5771					0.003714442802447593
DSLRWTPIL	9	Unmodified	_DSLRWTPIL_					0	0	0		nc|ENSG00000156650|Q8WYB5-2|KAT6B;ENSG00000156650|ENST00000287239|KAT6B;ENST00000490365.1_1_10:76744849-76785012:+|nuORF;nc|ENSG00000156650|Q8WYB5-3|KAT6B	nc|ENSG00000156650|Q8WYB5-2|KAT6B	nc|ENSG00000156650|Q8WYB5-2|KAT6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.806396484375	2	550.808574	1099.60259	-1.5611	-0.00085986	-1.905	-0.0010493	-3.4661	-0.0019092	550.8073038939729	29.672	1.5276	29.666	29.02	30.547	-0.0064812					96	34	5	0	0	0	0.69624	1	1855	1855		40.778	2.9666	1	1060600			5194	5387	3567	3570	5772	5772					0.05677718368656315
DSLVLDKRAS	10	Unmodified	_DSLVLDKRAS_					0	0	0			REV__ENST00000494360.5_1_3:50144211-50147205:+|nuORF	REV__ENST00000494360.5_1_3:50144211-50147205:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3064575195312	2	552.306395	1102.59824	1.2817	0.0007079	-1.3256	-0.00073213	-0.043866	-2.4228E-05	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.82886	1	9595	9595		37.812	1.3648	1	1712700	+		5195	16054	3568	3571	5773	5773					0.05104209155092576
DSLVQRTK	8	Unmodified	_DSLVQRTK_					0	0	0		ENST00000406477.7_1_22:44395197-44395427:+|nuORF	ENST00000406477.7_1_22:44395197-44395427:+|nuORF	ENST00000406477.7_1_22:44395197-44395427:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.2901916503906	2	473.769448	945.524344	0.53808	0.00025493	-1.4703	-0.00069657	-0.93218	-0.00044164	473.7697349894093	82.273	0.91573	82.21	81.933	82.848	-0.062935					27	20	2	0	0	0	0.4196	1	8382	8382		10.265	0	1	33649			5196	11271	3569	3572	5774	5774					0.04940285783436593
DSPFVPIGI	9	Unmodified	_DSPFVPIGI_					0	0	0		ENSG00000214511|ENST00000695931|HIGD1C	ENSG00000214511|ENST00000695931|HIGD1C	ENSG00000214511|ENST00000695931|HIGD1C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.75579833984375	2	472.758018	943.501483	-0.28077	-0.00013274	-3.8392	-0.001815	-4.1199	-0.0019477	472.7560511356496	25.548	0.77612	25.507	25.111	25.888	-0.04117					46	21	3	0	0	0	0.69914	1	1098	1098		40.573	0	1	114310			5197	8628	3570	3573	5775	5775					0.02747266665949155
DSPPTLVRLRK	11	Unmodified	_DSPPTLVRLRK_					0	0	0		nc|ENSG00000100099|Q9NQG7-3|HPS4;ENSG00000100099|ENST00000398145|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4;ENST00000481910.1_1_22:26872952-26875347:-|nuORF;ENST00000466781.5_1_22:26864510-26877728:-|nuORF;ENST00000496385.5_1_22:26862186-26875401:-|nuORF;nc|ENSG00000100099|Q9NQG7-2|HPS4	nc|ENSG00000100099|Q9NQG7-3|HPS4	nc|ENSG00000100099|Q9NQG7-3|HPS4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.3841552734375	2	641.385511	1280.75647	-1.1549	-0.00074073	-0.56975	-0.00036543	-1.7246	-0.0011062	641.3847498029768	102.62	1.032	102.75	102.41	103.44	0.13569					59	25	4	0	0	0	0.67778	1	10733	10733		35.152	0	1	1426400			5198	1796	3571	3574	5776	5776					0.12732128134166487
DSPYGDPID	9	Unmodified	_DSPYGDPID_					0	0	0		ENSG00000177613|ENST00000331173|CSTF2T	ENSG00000177613|ENST00000331173|CSTF2T	ENSG00000177613|ENST00000331173|CSTF2T	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.3137512207031	2	489.70618	977.397806	-0.66141	-0.0003239	-1.0966	-0.000537	-1.758	-0.00086089	489.70559890304264	95.29	0.65179	95.521	95.108	95.759	0.23103					21	15	2	0	0	0	0.20789	1	9746	9746		19.997	0	1	57243			5199	7151	3572	3575	5777	5777					-0.09179685232379597
DSPYGDPID	9	Unmodified	_DSPYGDPID_					0	0	0		ENSG00000177613|ENST00000331173|CSTF2T	ENSG00000177613|ENST00000331173|CSTF2T	ENSG00000177613|ENST00000331173|CSTF2T	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.31390380859375	2	489.70618	977.397806	0.74415	0.00036441	-2.3242	-0.0011382	-1.58	-0.00077375	489.7049233268197	95.435	0.6603	95.598	95.231	95.891	0.16316					18	15	2	0	0	0	0.20789	1	9742	9742		20.947	0	1	64127			5200	7151	3572	3575	5778	5778					-0.09179685232379597
DSQAPLLLN	9	Unmodified	_DSQAPLLLN_					0	0	0			REV__ENST00000553343.5_1_14:24910101-24911445:-|nuORF	REV__ENST00000553343.5_1_14:24910101-24911445:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.28570556640625	2	485.763832	969.513111	-0.97918	-0.00047565	1.1247	0.00054634	0.14552	7.0691E-05	485.7642084781629	30.192	0.70718	30.22	29.92	30.627	0.028618					28	15	2	0	0	0	0.20789	1	1936	1936		52.937	15.429	1	306330	+		5201	28643	3573	3576	5779	5779					0.02713463689292439
DSQDGSYYESD	11	Unmodified	_DSQDGSYYESD_					0	0	0			REV__ENST00000436740.1_1_2:128264289-128283784:-|nuORF	REV__ENST00000436740.1_1_2:128264289-128283784:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3687744140625	2	633.225662	1264.43677	2.611	0.0016534	3.2852	0.0020803	5.8963	0.0037337	633.2271946607206	98.562	0.204	98.938	98.824	99.028	0.37678					6	4	2	0	0	0	0.17484	1	11906	11906		46.457	11.305	1	42095	+		5202	20889	3574	3577	5780	5780					-0.18487049459304217
DSQRWKKSIK	10	Unmodified	_DSQRWKKSIK_					0	0	0		ENSG00000198576|ENST00000356613|ARC	ENSG00000198576|ENST00000356613|ARC	ENSG00000198576|ENST00000356613|ARC	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	638.360107421875	2	638.362036	1274.70952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.165	1	57.165	56.665	57.665	0								0	0	0	0.45132	1	4904	4904		33.922	2.2874	1				5203	8290	3575	3578	5781	5781					0.08315268583032775
DSRLFVFGLQ	10	Unmodified	_DSRLFVFGLQ_					0	0	0		nc|ENSG00000167632|Q96Q05-3|TRAPPC9;ENSG00000167632|ENST00000438773|TRAPPC9;nc|ENSG00000167632|Q96Q05-2|TRAPPC9	nc|ENSG00000167632|Q96Q05-3|TRAPPC9	nc|ENSG00000167632|Q96Q05-3|TRAPPC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	591.3187866210938	2	591.319306	1180.62406	0.11826	6.9931E-05	0.88304	0.00052216	1.0013	0.00059209	591.3195203707345	66.847	0.7553	66.811	66.494	67.25	-0.035698					74	33	3	0	0	0	0.60985	1	6390	6390		49.536	3.5638	1	235530			5204	6310	3576	3579	5782	5782					0.040971033973846716
DSRLRHRRL	9	Unmodified	_DSRLRHRRL_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5758056640625	3	403.574283	1207.70102	0.82175	0.00033164	0.77865	0.00031424	1.6004	0.00064588	403.57443762701166	84.285	1.6836	84.72	84.382	86.066	0.43538					93	41	3	0	0	0	0.78528	1	9808	9808		29.17	2.4204	1	859640	+		5205	18883	3577	3580	5783	5783					0.10547759457085704
DSRPPVAIFEL	11	Unmodified	_DSRPPVAIFEL_					0	0	0		ENST00000519737.1_1_8:29885889-29886273:+|nuORF	ENST00000519737.1_1_8:29885889-29886273:+|nuORF	ENST00000519737.1_1_8:29885889-29886273:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3363037109375	2	622.337695	1242.66084	-0.073789	-4.5921E-05	-1.977	-0.0012304	-2.0508	-0.0012763	622.3363752507829	111.19	1.2568	111.19	110.57	111.83	0					110	41	4	0	0	0	0.76322	1	11603	11603		19.104	2.3861	1	190840			5206	13143	3578	3581	5784	5784					0.04921355223291357
DSSALLNLSLK	11	Unmodified	_DSSALLNLSLK_					0	0	0			REV__nc|ENSG00000211898|P01880-1|IGHD	REV__nc|ENSG00000211898|P01880-1|IGHD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8311767578125	2	580.829703	1159.64485	-1.9881	-0.0011547	3.2987	0.001916	1.3107	0.00076128	580.8312794976786	59.527	0.91995	59.918	59.525	60.445	0.39077					48	22	3	0	0	0	0.05483	1	6277	6277		101.25	5.4375	1	1069200	+		5207	30193	3579	3582	5785	5785					0.07141648986385007
DSSAPLQGRR	10	Unmodified	_DSSAPLQGRR_					0	0	0		nc|ENSG00000251692|Q96A99-2|PTX4;ENSG00000251692|ENST00000447419|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.7885131835938	2	543.786161	1085.55777	0.086849	4.7227E-05	3.4538	0.0018781	3.5406	0.0019253	543.7878508528075	33.084	0.99409	33.082	32.75	33.744	-0.0016327					48	23	3	0	0	0	0.67571	1	1908	1908		45.972	6.7194	1	324090			5208	8853	3580	3583	5786	5786					0.018412875553167396
DSSRFEQM	8	Unmodified	_DSSRFEQM_					0	0	0			REV__nc|ENSG00000130396|P55196-2|AFDN	REV__nc|ENSG00000130396|P55196-2|AFDN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.2161560058594	2	500.213649	998.412745	1.1024	0.00055141	2.275	0.001138	3.3773	0.0016894	500.2146759357686	23.402	0.47427	22.828	22.62	23.094	-0.57415					21	10	3	0	0	0	0.87479	1	1056	1056		30.504	0	1	219000	+		5209	29839	3581	3584	5787	5787					-0.08652516636016117
DSSYAGLTDIP	11	Unmodified	_DSSYAGLTDIP_					0	0	0			REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.7665405273438	2	569.766768	1137.51898	-0.41688	-0.00023753	0.51575	0.00029385	0.098861	5.6328E-05	569.7669206629952	60.707	0.52001	60.716	60.36	60.88	0.0081215					45	17	3	0	0	0	0.60058	1	5265	5265		44.377	0	1	499530	+		5210	20880	3582	3585	5788	5788					-0.04427482589699139
DSTIPVLG	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))DSTIPVLG_					1	0	0		ENSG00000179826|ENST00000621697|MRGPRX3	ENSG00000179826|ENST00000621697|MRGPRX3	ENSG00000179826|ENST00000621697|MRGPRX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2285461425781	2	422.226551	842.438549	-0.20925	-8.8352E-05	3.7401	0.0015792	3.5309	0.0014908	422.22805369258475	53.827	1.2075	54.412	53.667	54.874	0.58474					78	28	4	0	0	0	0.90465	1	5462	5462		40.573	7.057	1	942960			5211	7294	3583	3586	5789	5789					0.011027008779137759
DSTLIAEIIL	10	Unmodified	_DSTLIAEIIL_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2;ENST00000574518.1_1_17:7674005-7689702:+|nuORF	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.3131713867188	2	544.315897	1086.61724	-0.40246	-0.00021907	-3.1473	-0.0017131	-3.5498	-0.0019322	544.3140404635302	41.605	0.52026	41.564	41.292	41.812	-0.040806					25	12	3	0	0	0	0.86218	1	3130	3130		32.812	2.3088	1	222290			5212	7573	3584	3587	5790	5790					0.07739745726144065
DSTPELPAPP	10	Unmodified	_DSTPELPAPP_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2347412109375	2	512.253297	1022.49204	0.20309	0.00010403	0.08073	4.1354E-05	0.28382	0.00014539	512.2533062359137	58.311	0.4929	58.281	57.979	58.472	-0.029861					18	12	2	0	0	0	0.37624	1	5416	5416		27.882	4.8398	1	58181			5213	7058	3585	3588	5791	5791					-0.01830546410246825
DSVKKLGT	8	Unmodified	_DSVKKLGT_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.250244140625	2	424.247818	846.481082	2.718	0.0011531	2.5033	0.001062	5.2214	0.0022152	424.24890535908264	107.33	0.96184	107.3	106.88	107.84	-0.034134					71	22	4	0	0	0	0.89494	1	11907	11907		37.159	0	1	4480000			5214	2924	3586	3589	5792	5792					0.05170096006156655
DSVLAVAIVPL	11	Unmodified	_DSVLAVAIVPL_					0	0	0			REV__ENST00000379391.7_2_12:57452318-57452450:-|nuORF	REV__ENST00000379391.7_2_12:57452318-57452450:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3742065429688	2	548.834257	1095.65396	-0.28791	-0.00015801	-2.3857	-0.0013094	-2.6736	-0.0014674	548.8328103517962	37.434	0.53164	37.381	37.094	37.625	-0.053558					16	11	2	0	0	0	0.16958	1	2545	2545		40.778	0	1	57250	+		5215	25919	3587	3590	5793	5793					0.10996042342708279
DSVLFLKKID	10	Unmodified	_DSVLFLKKID_					0	0	0		nc|ENSG00000158290|Q13620|CUL4B;ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620-3|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3424682617188	2	589.344989	1176.67542	-1.324	-0.00078029	-2.4688	-0.001455	-3.7928	-0.0022353	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.76096	1	9388	9388		41.427	7.2541	1	5946500			5216	5469	3588	3591	5794	5794					0.09415427371436635
DSVLFLKKID	10	Unmodified	_DSVLFLKKID_					0	0	0		nc|ENSG00000158290|Q13620|CUL4B;ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620-3|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.343017578125	2	589.344989	1176.67542	-1.324	-0.0007803	-2.248	-0.0013248	-3.572	-0.0021051	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.70553	2	9543	9543;9890		44.377	10.205	1	17904000			5217	5469	3588	3591	5795;5796	5795					0.09415427371436635
DSVLFLKKID	10	Unmodified	_DSVLFLKKID_					0	0	0		nc|ENSG00000158290|Q13620|CUL4B;ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620-3|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.343017578125	2	589.344989	1176.67542	-0.63667	-0.00037522	-2.3968	-0.0014126	-3.0335	-0.0017878	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.86587	1	11007	11007		29.17	1.0886	1	2236100			5218	5469	3588	3591	5797	5797					0.09415427371436635
DSVLLAFGN	9	Unmodified	_DSVLLAFGN_					0	0	0		ENSG00000174567|ENST00000308302|GOLT1A	ENSG00000174567|ENST00000308302|GOLT1A	ENSG00000174567|ENST00000308302|GOLT1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.2447204589844	2	468.245275	934.475997	-0.88554	-0.00041465	-0.24046	-0.00011259	-1.126	-0.00052724	468.2450126988005	105.41	2.3732	105.41	104.2	106.57	0					115	56	4	0	0	0	0.76255	1	10875	10875		35.618	0	1	874040			5219	6946	3589	3592	5798	5798					0.006137921435197313
DSVLPTPVA	9	Unmodified	_DSVLPTPVA_					0	0	0		nc|ENSG00000171877|Q7Z6J6-2|FRMD5;ENSG00000171877|ENST00000417257|FRMD5	nc|ENSG00000171877|Q7Z6J6-2|FRMD5	nc|ENSG00000171877|Q7Z6J6-2|FRMD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.7466125488281	2	449.74765	897.480748	0.17268	7.7663E-05	0.11581	5.2087E-05	0.2885	0.00012975	449.74756618958105	36.411	0.59432	36.514	36.253	36.847	0.10306					44	19	3	0	0	0	0.72402	1	2013	2013		38.806	0	1	153600			5220	6722	3590	3593	5799	5799					0.027906762862812684
DSVLPTPVA	9	Unmodified	_DSVLPTPVA_					0	0	0		nc|ENSG00000171877|Q7Z6J6-2|FRMD5;ENSG00000171877|ENST00000417257|FRMD5	nc|ENSG00000171877|Q7Z6J6-2|FRMD5	nc|ENSG00000171877|Q7Z6J6-2|FRMD5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	449.74765	897.480748	-0.67835	-0.00030509	0.34738	0.00015624	-0.33096	-0.00014885	449.74766729008894	36.621	0.5367	36.632	36.347	36.883	0.011173	0.10346	2.7135E-06	NaN	38.806	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26587			5221	6722	3590	3593							0.027906762862812684
DSVLPTPVA	9	Unmodified	_DSVLPTPVA_					0	0	0		nc|ENSG00000171877|Q7Z6J6-2|FRMD5;ENSG00000171877|ENST00000417257|FRMD5	nc|ENSG00000171877|Q7Z6J6-2|FRMD5	nc|ENSG00000171877|Q7Z6J6-2|FRMD5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	449.74765	897.480748	-0.19886	-8.9437E-05	-0.42905	-0.00019297	-0.62791	-0.0002824	449.7482874575155	36.162	0.20488	36.444	36.348	36.553	0.28173	-0.085268	-0.00069569	NaN	38.806	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43852			5222	6722	3590	3593							0.027906762862812684
DSVYNTAWWSK	11	Unmodified	_DSVYNTAWWSK_					0	0	0			REV__nc|ENSG00000110090|P50416-2|CPT1A	REV__nc|ENSG00000110090|P50416-2|CPT1A	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.8807678222656	3	452.878815	1355.61462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.512	1	17.429	16.929	17.929	-0.0821								0	0	0	0.56276	1	236	236		16.53	1.1967	1		+		5223	17795	3591	3594	5800	5800					-0.04896709678814659
DSWDRGIPR	9	Unmodified	_DSWDRGIPR_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8;ENST00000572445.1_1_17:1564459-1565038:-|nuORF	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.27490234375	2	551.275429	1100.53631	0.8757	0.00048275	-0.93134	-0.00051342	-0.055636	-3.0671E-05	551.2747934781779	27.265	1.266	27.237	26.749	28.015	-0.027706					88	32	4	0	0	0	0.58668	1	1210	1210		47.657	3.5405	1	621530			5224	6918	3592	3595	5801	5801					-0.00994097473403599
DSWLLPKKAPQ	11	Unmodified	_DSWLLPKKAPQ_					0	0	0			REV__nc|ENSG00000196482|P62508-3|ESRRG	REV__nc|ENSG00000196482|P62508-3|ESRRG	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8632202148438	2	641.861338	1281.70812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.12	1	119.04	118.54	119.54	-0.07531								0	0	0	0.56276	1	12777	12777		12.812	0	1		+		5225	30132	3593	3596	5802	5802					0.07853634494290418
DSYFSVLNAFI	11	Unmodified	_DSYFSVLNAFI_					0	0	0		nc|ENSG00000168397|Q9Y4P1-2|ATG4B;ENST00000494465.5_1_2:242592964-242606150:+|nuORF;ENST00000483778.5_1_2:242577129-242598587:+|nuORF;ENST00000465399.5_1_2:242577129-242594780:+|nuORF;ENST00000475195.5_1_2:242577129-242594181:+|nuORF;ENST00000493618.5_1_2:242577129-242598937:+|nuORF;nc|ENSG00000168397|Q9Y4P1-3|ATG4B;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;nc|ENSG00000168397|Q9Y4P1-6|ATG4B;ENSG00000168397|ENST00000404914|ATG4B	nc|ENSG00000168397|Q9Y4P1-2|ATG4B	nc|ENSG00000168397|Q9Y4P1-2|ATG4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	638.3167114257812	2	638.316428	1274.6183	-0.84859	-0.00054167	1.0313	0.00065831	0.18273	0.00011664	638.3170070427124	72.018	1.5366	72.403	71.877	73.413	0.38581					96	36	5	0	0	0	0.26196	2	8028	8028;8039		76.17	7.3829	1	6693700			5226	15079	3594	3597	5803;5804	5803					-0.00802039904965568
DTAALMAL	8	Unmodified	_DTAALMAL_					0	0	0			REV__ENSG00000171944|ENST00000307388|OR52A5	REV__ENSG00000171944|ENST00000307388|OR52A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2094421386719	2	403.209847	804.40514	0.85516	0.00034481	-2.9281	-0.0011806	-2.0729	-0.00083583	403.2085877273137	85.891	2.1457	85.817	85.277	87.423	-0.073761					115	49	4	0	0	0	0.86791	1	8930	8930		28.254	2.8041	1	1526100	+		5227	21789	3595	3598	5805	5805					-0.004886241656663515
DTAALMAL	8	Unmodified	_DTAALMAL_					0	0	0			REV__ENSG00000171944|ENST00000307388|OR52A5	REV__ENSG00000171944|ENST00000307388|OR52A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2091979980469	2	403.209847	804.40514	-1.8186	-0.00073328	-0.268	-0.00010806	-2.0866	-0.00084134	403.20969687299277	85.674	2.1245	85.86	85.144	87.269	0.18523					94	49	3	0	0	0	0.86288	1	8408	8408		26.796	0	1	1250400	+		5228	21789	3595	3598	5806	5806					-0.004886241656663515
DTAALMAL	8	Unmodified	_DTAALMAL_					0	0	0			REV__ENSG00000171944|ENST00000307388|OR52A5	REV__ENSG00000171944|ENST00000307388|OR52A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.2091064453125	2	403.209847	804.40514	1.1408	0.00046	-3.5043	-0.001413	-2.3635	-0.00095298	403.208345572438	85.63	1.9726	86.071	85.621	87.594	0.44144					91	47	3	0	0	0	0.86288	1	9982	9982		26.796	0	1	1218200	+		5229	21789	3595	3598	5807	5807					-0.004886241656663515
DTAAQITQR	9	Unmodified	_DTAAQITQR_					0	0	0		nc|ENSG00000204525|P10321-2|HLA-C;ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;ENST00000494367.1_1_6:29974674-29976922:+|nuORF	nc|ENSG00000204525|P10321-2|HLA-C	nc|ENSG00000204525|P10321-2|HLA-C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	502.2618103027344	2	502.261988	1002.50942	-1.7613	-0.00088465	1.7641	0.00088606	0.0028008	1.4067E-06	502.26273632290423	30.719	0.84208	30.719	30.426	31.268	0					69	30	3	0	0	0	2.8557E-39	2	1421	1414;1421		199.7	86.293	1	657970			5230	8454	3596	3599	5808;5809	5809					0.008267939154279702
DTAAQITQR	9	Unmodified	_DTAAQITQR_					0	0	0		nc|ENSG00000204525|P10321-2|HLA-C;ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;ENST00000494367.1_1_6:29974674-29976922:+|nuORF	nc|ENSG00000204525|P10321-2|HLA-C	nc|ENSG00000204525|P10321-2|HLA-C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	502.261988	1002.50942	-0.17701	-8.8905E-05	0.51058	0.00025644	0.33357	0.00016754	502.26177274567937	30.638	0.41663	30.59	30.388	30.804	-0.047062	-0.11458	-0.0011231	NaN	199.7	17	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46855			5231	8454	3596	3599							0.008267939154279702
DTAAQITQR	9	Unmodified	_DTAAQITQR_					0	0	0		nc|ENSG00000204525|P10321-2|HLA-C;ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;ENST00000494367.1_1_6:29974674-29976922:+|nuORF	nc|ENSG00000204525|P10321-2|HLA-C	nc|ENSG00000204525|P10321-2|HLA-C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	502.261988	1002.50942	-0.68765	-0.00034538	0.67745	0.00034026	-0.010205	-5.1258E-06	502.2620344979093	30.661	0.54548	30.65	30.372	30.917	-0.010656	-0.054553	-0.00095545	NaN	199.7	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31344			5232	8454	3596	3599							0.008267939154279702
DTAAQITQR	9	Unmodified	_DTAAQITQR_					0	0	0		nc|ENSG00000204525|P10321-2|HLA-C;ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;ENSG00000234745|ENST00000412585|HLA-B;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;ENST00000494367.1_1_6:29974674-29976922:+|nuORF	nc|ENSG00000204525|P10321-2|HLA-C	nc|ENSG00000204525|P10321-2|HLA-C	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	502.261988	1002.50942	-1.4192	-0.00071281	0.63607	0.00031947	-0.78314	-0.00039334	502.2619541588437	30.78	0.44368	30.86	30.634	31.077	0.079834	0.1547	-0.00099701	NaN	199.7	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33980			5233	8454	3596	3599							0.008267939154279702
DTAPRILFW	9	Unmodified	_DTAPRILFW_					0	0	0		ENSG00000071553|ENST00000369762|ATP6AP1	ENSG00000071553|ENST00000369762|ATP6AP1	ENSG00000071553|ENST00000369762|ATP6AP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	559.80322265625	2	559.803291	1117.59203	-0.63937	-0.00035792	0.78561	0.00043979	0.14624	8.1866E-05	559.8035328499079	86.861	0.95203	86.861	86.517	87.469	0					62	21	4	0	0	0	0.073112	5	8290	8278;8290;8302;8313;8325		99.375	36.419	1	647940			5234	1258	3597	3600	5810;5811;5812;5813;5814	5811					0.03793735714248214
DTARLRVL	8	Unmodified	_DTARLRVL_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2880554199219	2	472.287808	942.561064	-0.91361	-0.00043149	1.3293	0.00062781	0.41567	0.00019632	472.2883987984471	99.414	1.6316	99.414	99.097	100.73	0					84	38	3	0	0	0	0.87479	1	10111	10111		30.504	1.3541	1	360760	+		5235	17672	3598	3601	5815	5815					0.08748582400005489
DTAVLITRYDI	11	Unmodified	_DTAVLITRYDI_					0	0	0		nc|ENSG00000142303|Q9H324|ADAMTS10;ENSG00000142303|ENST00000597188|ADAMTS10;ENST00000601163.1_1_19:8661189-8662174:-|nuORF	nc|ENSG00000142303|Q9H324|ADAMTS10	nc|ENSG00000142303|Q9H324|ADAMTS10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3461303710938	2	640.34826	1278.68197	0.93986	0.00060184	-3.8166	-0.002444	-2.8768	-0.0018421	640.3460312358319	102.96	0.59602	103.09	102.81	103.4	0.12622					50	14	5	0	0	0	0.66929	1	10891	10891		36.447	1.2947	1	4886000			5236	4556	3599	3602	5816	5816					0.05377320532147678
DTCFSTIKL	9	Unmodified	_DTCFSTIKL_					0	0	0		ENSG00000115392|ENST00000233741|FANCL;nc|ENSG00000115392|Q9NW38-2|FANCL	ENSG00000115392|ENST00000233741|FANCL	ENSG00000115392|ENST00000233741|FANCL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.2861328125	2	514.260068	1026.50558	0.23239	0.00011951	-2.3266	-0.0011965	-2.0942	-0.001077	514.7588584549634	80.572	0.21286	81.098	80.907	81.12	0.52676					5	4	2	0	0	0	0.20789	1	9278	9278		47.657	10.498	1	34464			5237	2839	3600	3603	5817	5817					-0.006610119026390748
DTCLEIFLITI	11	Unmodified	_DTCLEIFLITI_					0	0	0			REV__ENSG00000105675|ENST00000262623|ATP4A	REV__ENSG00000105675|ENST00000262623|ATP4A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3927612304688	2	640.843964	1279.67338	0.065502	4.1976E-05	-0.30831	-0.00019758	-0.24281	-0.0001556	641.3463071618469	53.621	0.16521	53.559	53.443	53.608	-0.062065					5	3	2	0	0	0	0.17387	1	4385	4385		23.523	4.4192	1	68143	+		5238	17561	3601	3604	5818	5818					0.044726305713084
DTDHYFLRY	9	Unmodified	_DTDHYFLRY_					0	0	0		nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;ENSG00000124155|ENST00000279036|PIGT;chr20:45420223-45420312|24|15.25|0.9|4.09|+|ENST00000638387|PIGT,PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT	nc|ENSG00000124155|Q969N2-4|PIGT	nc|ENSG00000124155|Q969N2-4|PIGT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.283203125	2	615.28292	1228.55129	-0.33218	-0.00020438	1.1811	0.00072672	0.84893	0.00052233	615.2836152967006	56.482	0.98592	56.47	56.226	57.212	-0.012203					72	40	2	0	0	0	0.11055	7	5073	5056;5061;5067;5073;5079;5084;5091		90.37	18.492	1	2193600			5239	3309	3602	3605	5819;5820;5821;5822;5823;5824;5825	5822					-0.053846503960585324
DTDHYFLRY	9	Unmodified	_DTDHYFLRY_					0	0	0		nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;ENSG00000124155|ENST00000279036|PIGT;chr20:45420223-45420312|24|15.25|0.9|4.09|+|ENST00000638387|PIGT,PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT	nc|ENSG00000124155|Q969N2-4|PIGT	nc|ENSG00000124155|Q969N2-4|PIGT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	615.28271484375	2	615.28292	1228.55129	-0.017081	-1.051E-05	1.0333	0.00063576	1.0162	0.00062525	615.2834344079891	56.472	1.0554	56.443	56.212	57.267	-0.028664					100	41	3	0	0	0	0.065196	6	5178	5162;5167;5172;5178;5186;5195		101.6	16.685	1	2171100			5240	3309	3602	3605	5826;5827;5828;5829;5830;5831	5829					-0.053846503960585324
DTDHYFLRY	9	Unmodified	_DTDHYFLRY_					0	0	0		nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;ENSG00000124155|ENST00000279036|PIGT;chr20:45420223-45420312|24|15.25|0.9|4.09|+|ENST00000638387|PIGT,PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT	nc|ENSG00000124155|Q969N2-4|PIGT	nc|ENSG00000124155|Q969N2-4|PIGT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	615.2844848632812	2	615.28292	1228.55129	-0.9644	-0.00059338	2.1751	0.0013383	1.2107	0.00074495	615.284163846832	56.47	0.89928	56.503	56.264	57.163	0.033184					82	36	3	0	0	0	0.01944	4	5103	5090;5095;5103;5122		125.81	46.101	1	1761300			5241	3309	3602	3605	5832;5833;5834;5835	5834					-0.053846503960585324
DTDLEKKLSEV	11	Unmodified	_DTDLEKKLSEV_					0	0	0			REV__nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1	REV__nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	638.8351440429688	2	638.835182	1275.65581	0.70348	0.0004494	0.010481	6.6959E-06	0.71396	0.0004561	638.8348170860995	74.695	1.1442	74.827	74.537	75.682	0.13208					77	32	4	0	0	0	0.084046	1	6924	6924		96.034	16.321	1	682170	+		5242	22700	3603	3606	5836	5836					0.02901006570004938
DTDLEKKLSEV	11	Unmodified	_DTDLEKKLSEV_					0	0	0			REV__nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1	REV__nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	639.3345947265625	2	638.835182	1275.65581	-0.69863	-0.00044631	1.4002	0.00089447	0.70153	0.00044816	638.835717832915	74.828	1.0238	74.914	74.628	75.651	0.085907					67	27	4	0	0	0	0.34641	1	6885	6885		63.534	3.4156	1	647960	+		5243	22700	3603	3606	5837	5837					0.02901006570004938
DTEEKPYKCQ	10	Unmodified	_DTEEKPYKCQ_					0	0	0		ENSG00000171970|ENST00000306908|ZNF57	ENSG00000171970|ENST00000306908|ZNF57	ENSG00000171970|ENST00000306908|ZNF57	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.21539306640625	3	414.188661	1239.54415	1.2021	0.00049792	1.4751	0.00061098	2.6773	0.0011089	414.1891558924095	34.41	0.37209	34.715	34.571	34.943	0.30494					13	8	2	0	0	0	0.37624	1	2554	2554		20.03	0.7678	1	118200			5244	6729	3604	3607	5838	5838					-0.06603751058787566
DTELAISIQ	9	Unmodified	_DTELAISIQ_					0	0	0			REV__nc|ENSG00000168944|Q8N960-2|CEP120	REV__nc|ENSG00000168944|Q8N960-2|CEP120	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2593994140625	2	495.261122	988.507691	-1.7096	-0.00084669	-2.5715	-0.0012736	-4.2811	-0.0021203	495.25992726495855	40.741	2.1466	41.33	40.797	42.943	0.58915					138	58	4	0	0	0	0.73802	1	3561	3561		37.812	4.2959	1	7011700	+		5245	21538	3605	3608	5839	5839					0.0129774010682695
DTFCGSPPY	9	Unmodified	_DTFCGSPPY_					0	0	0		nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;ENSG00000072518|ENST00000402010|MARK2;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2;ENSG00000075413|ENST00000429436|MARK3;nc|ENSG00000075413|P27448-7|MARK3;ENST00000558223.5_1_14:103852366-103932133:+|nuORF;nc|ENSG00000075413|P27448-2|MARK3;nc|ENSG00000075413|P27448-4|MARK3;nc|ENSG00000075413|P27448-3|MARK3;nc|ENSG00000075413|P27448-6|MARK3;ENSG00000007047|ENST00000262891|MARK4;nc|ENSG00000116141|Q9P0L2-3|MARK1;nc|ENSG00000116141|Q9P0L2-2|MARK1;nc|ENSG00000007047|Q96L34-2|MARK4;ENSG00000116141|ENST00000366917|MARK1;ENST00000588621.5_1_19:45767955-45791108:+|nuORF	nc|ENSG00000072518|Q7KZI7-12|MARK2;ENST00000588621.5_1_19:45767955-45791108:+|nuORF	nc|ENSG00000072518|Q7KZI7-12|MARK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.697265625	2	493.699843	985.385133	0.16233	8.014E-05	-4.4636	-0.0022037	-4.3013	-0.0021235	493.69751957924177	31.324	1.503	31.328	30.796	32.299	0.0037212					89	34	4	0	0	0	0.39977	1	2093	2093		57.811	3.0466	1	3976300			5246	1278;14216	3606	3609	5840	5840					-0.10814419896257732
DTFGPRAQGW	10	Unmodified	_DTFGPRAQGW_					0	0	0		nc|ENSG00000011243|Q9ULX6-2|AKAP8L;ENSG00000011243|ENST00000397410|AKAP8L;ENST00000594893.5_1_19:15511079-15529746:-|nuORF;ENST00000593845.5_1_19:15510111-15529746:-|nuORF	nc|ENSG00000011243|Q9ULX6-2|AKAP8L	nc|ENSG00000011243|Q9ULX6-2|AKAP8L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.7672729492188	2	567.76998	1133.52541	-1.0242	-0.00058149	1.297	0.0007364	0.27284	0.00015491	567.7704116617856	57.67	0.46568	57.67	57.392	57.857	0					32	17	3	0	0	0	0.86802	1	4964	4964		27.047	0.3544	1	93386			5247	784	3607	3610	5841	5841					-0.0360149984767304
DTFTIRGPR	9	Unmodified	_DTFTIRGPR_					0	0	0		ENST00000542265.5_1_12:120644402-120647718:+|nuORF	ENST00000542265.5_1_12:120644402-120647718:+|nuORF	ENST00000542265.5_1_12:120644402-120647718:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8103637695312	2	531.788173	1061.56179	0.96098	0.00051104	1.4755	0.00078463	2.4364	0.0012957	531.7888644700887	97.105	1.0206	97.496	97.157	98.178	0.39065					45	24	3	0	0	0	0.20789	1	11776	11776		37.812	0	1	556450			5248	13528	3608	3611	5842	5842					0.03347377049044553
DTGCEEDEAC	10	Unmodified	_DTGCEEDEAC_					0	0	0			REV__ENSG00000107984|ENST00000373970|DKK1	REV__ENSG00000107984|ENST00000373970|DKK1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	536.5006103515625	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.761	1	69.761	69.261	70.261	0								0	0	0	0.45132	1	6221	6221		10.866	3.6722	1		+		5249	17687	3609	3612	5843	5843					-0.21549077329109423
DTGKTKIL	8	Unmodified	_DTGKTKIL_					0	0	0		ENSG00000158417|ENST00000289371|EIF5B	ENSG00000158417|ENST00000289371|EIF5B	ENSG00000158417|ENST00000289371|EIF5B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2630920410156	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.87479	1	2459	2459		30.504	3.8107	1	3507500			5250	5475	3610	3613	5844	5844					0.07010669040232642
DTGLKLQH	8	Unmodified	_DTGLKLQH_					0	0	0		ENSG00000145642|ENST00000389074|SHISAL2B	ENSG00000145642|ENST00000389074|SHISAL2B	ENSG00000145642|ENST00000389074|SHISAL2B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.792724609375	2	456.250892	910.48723	-1.2606	-0.00057513	1.4342	0.00065436	0.17367	7.9236E-05	456.2518790588009	37.594	0.1433	37.611	37.545	37.688	0.016567					5	3	2	0	0	0	0.4196	1	2166	2166		37.159	8.9048	1	21257			5251	4781	3611	3614	5845	5845					0.028406142376638854
DTGSHELRKL	10	Unmodified	_DTGSHELRKL_					0	0	0			REV__ENSG00000170037|ENST00000563694|CNTROB	REV__ENSG00000170037|ENST00000563694|CNTROB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	578.3107299804688	2	578.309469	1154.60439	0.66204	0.00038287	1.3221	0.00076457	1.9841	0.0011474	578.3100530437905	110.07	1.6087	110.19	110.03	111.64	0.11946					88	58	4	0	0	0	0.86763	1	11848	11848		26.693	0.62953	1	2568100	+		5252	21627	3612	3615	5846	5846					0.033267273866158575
DTHTVIISP	9	Unmodified	_DTHTVIISP_					0	0	0		ENSG00000019549|ENST00000020945|SNAI2	ENSG00000019549|ENST00000020945|SNAI2	ENSG00000019549|ENST00000020945|SNAI2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7962951660156	2	491.763832	981.513111	-0.36014	-0.0001771	0.051842	2.5494E-05	-0.3083	-0.00015161	491.7639879901984	53.167	0.45541	53.782	53.531	53.986	0.61436					13	10	2	0	0	0	0.20789	1	5367	5367		34.173	0	1	114210			5253	840	3613	3616	5847	5847					0.02161463689287757
DTHVRKHKI	9	Unmodified	_DTHVRKHKI_					0	0	0			REV__ENSG00000125945|ENST00000314011|ZNF436	REV__ENSG00000125945|ENST00000314011|ZNF436	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3297729492188	2	567.330539	1132.64652	0.77491	0.00043963	-1.6405	-0.0009307	-0.86557	-0.00049107	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.78983	1	8983	8983		27.882	0.83493	1	6344600	+		5254	18683	3614	3617	5848	5848					0.0855074758567298
DTIAQLRGK	9	Unmodified	_DTIAQLRGK_					0	0	0			REV__ENSG00000099260|ENST00000263174|PALMD	REV__ENSG00000099260|ENST00000263174|PALMD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2901306152344	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.76255	1	9921	9921		35.618	0	1	9038000	+		5255	17086	3615	3618	5849	5849					0.06628261191804086
DTIEIITDR	9	Unmodified	_DTIEIITDR_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.2854614257812	2	538.285128	1074.5557	-1.1855	-0.00063813	1.5528	0.00083586	0.36733	0.00019773	538.2858172241826	57.197	0.57536	57.197	56.957	57.533	0					40	24	2	0	0	0	0.13808	4	4909	4900;4909;4917;4924		85.862	29.428	1	143720			5256	3232	3616	3619	5850;5851;5852;5853	5851					0.021408140268476927
DTIKQISEF	9	Unmodified	_DTIKQISEF_					0	0	0			REV__nc|ENSG00000008838|O75448-2|MED24	REV__nc|ENSG00000008838|O75448-2|MED24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.28125	2	540.782222	1079.54989	-0.2214	-0.00011973	-0.37981	-0.00020539	-0.60121	-0.00032512	540.7819318864873	60.029	0.56477	60.015	59.789	60.354	-0.013729					37	14	3	0	0	0	0.48102	1	5523	5523		52.937	1.4089	1	212540	+		5257	16143	3617	3620	5854	5854					0.013297155152031337
DTIKQISEF	9	Unmodified	_DTIKQISEF_					0	0	0			REV__nc|ENSG00000008838|O75448-2|MED24	REV__nc|ENSG00000008838|O75448-2|MED24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.284423828125	2	540.782222	1079.54989	1.0157	0.00054928	-1.4517	-0.00078503	-0.43594	-0.00023575	540.7813808375619	59.963	0.80314	59.932	59.445	60.248	-0.031727					33	20	2	0	0	0	0.28163	2	5646	5646;5663		66.429	6.311	1	212770	+		5258	16143	3617	3620	5855;5856	5855					0.013297155152031337
DTIPLSLAL	9	Unmodified	_DTIPLSLAL_					0	0	0		nc|ENSG00000106853|Q14914-2|PTGR1;ENSG00000106853|ENST00000407693|PTGR1	nc|ENSG00000106853|Q14914-2|PTGR1	nc|ENSG00000106853|Q14914-2|PTGR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.77947998046875	2	471.778951	941.543348	-0.44647	-0.00021064	0.5048	0.00023815	0.058328	2.7518E-05	471.7790174036812	82.614	0.85271	82.673	82.295	83.148	0.059166					41	19	3	0	0	0	0.58151	1	8295	8295		47.916	1.9636	1	250090			5259	2321	3618	3621	5857	5857					0.07023822354460663
DTIYEELVNL	10	Unmodified	_DTIYEELVNL_					0	0	0			REV__ENSG00000177138|ENST00000327220|FAM9B	REV__ENSG00000177138|ENST00000327220|FAM9B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8070678710938	2	604.805894	1207.59723	-0.029454	-1.7814E-05	0.35966	0.00021752	0.33021	0.00019971	604.8059425597291	78.892	0.76372	79.441	79.107	79.871	0.54945					43	17	4	0	0	0	0.51302	1	9074	9074		54.776	1.8396	1	656990	+		5260	22183	3619	3622	5858	5858					0.0017394999551925139
DTKCHLQF	8	Unmodified	_DTKCHLQF_					0	0	0			REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__ENSG00000140836|ENST00000268489|ZFHX3	REV__ENSG00000140836|ENST00000268489|ZFHX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.2375793457031	2	496.236927	990.459301	-0.19806	-9.8285E-05	2.9137	0.0014459	2.7157	0.0013476	496.2381223206561	30.903	0.94662	30.856	30.347	31.293	-0.047064					49	24	3	0	0	0	0.89494	1	1712	1712		37.159	1.5408	1	221780	+		5261	15640;17023	3620	3623	5859	5859					-0.036310320140728436
DTKDKVELR	9	Unmodified	_DTKDKVELR_					0	0	0			REV__nc|ENSG00000127914|Q99996-5|AKAP9	REV__nc|ENSG00000127914|Q99996-5|AKAP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3062744140625	2	552.306395	1102.59824	0.78014	0.00043088	-0.74693	-0.00041253	0.033219	1.8347E-05	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.71772	1	9310	9310		39.253	5.0803	1	1841700	+		5262	18753	3621	3624	5860	5860					0.05104209155092576
DTKKMRNK	8	Unmodified	_DTKKMRNK_					0	0	0			REV__ENSG00000019995|ENST00000359653|ZRANB1	REV__ENSG00000019995|ENST00000359653|ZRANB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2227783203125	2	510.784576	1019.5546	0.23189	0.00011845	-2.0378	-0.0010409	-1.8059	-0.00092243	510.7839965506258	93.293	0.2557	93.743	93.608	93.864	0.44988					9	5	2	0	0	0	0.4196	1	11140	11140		34.173	6.2903	1	38802	+		5263	16232	3622	3625	5861	5861					0.04560321176973048
DTKKMRNK	8	Unmodified	_DTKKMRNK_					0	0	0			REV__ENSG00000019995|ENST00000359653|ZRANB1	REV__ENSG00000019995|ENST00000359653|ZRANB1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	510.784576	1019.5546	2.0754	0.0010601	-3.0543	-0.0015601	-0.97883	-0.00049997	510.7827467956102	94.096	0.38487	94.037	93.801	94.186	-0.059212	0.13886	-0.00089514	NaN	34.173	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79706	+		5264	16232	3622	3625							0.04560321176973048
DTKKMRNK	8	Unmodified	_DTKKMRNK_					0	0	0			REV__ENSG00000019995|ENST00000359653|ZRANB1	REV__ENSG00000019995|ENST00000359653|ZRANB1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	510.784576	1019.5546	0.4824	0.0002464	-0.92167	-0.00047077	-0.43927	-0.00022437	510.7836956854044	93.869	0.30054	93.914	93.751	94.052	0.045448	0.016116	0.0012835	NaN	34.173	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62669	+		5265	16232	3622	3625							0.04560321176973048
DTKMRIRAF	9	Unmodified	_DTKMRIRAF_					0	0	0		nc|ENSG00000036257|Q13618-3|CUL3;ENSG00000036257|ENST00000264414|CUL3	nc|ENSG00000036257|Q13618-3|CUL3	nc|ENSG00000036257|Q13618-3|CUL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.8094482421875	2	569.3135	1136.61245	-0.92394	-0.00052601	-3.1612	-0.0017997	-4.0851	-0.0023257	569.3116655952493	38.361	0.72662	38.372	38.166	38.893	0.011173					35	16	3	0	0	0	0.7932	1	2656	2656		20.947	1.8434	1	190290			5266	901	3623	3626	5862	5862					0.049605831023882274
DTKPTLKRHI	10	Unmodified	_DTKPTLKRHI_					0	0	0		nc|ENSG00000125388|P32298-3|GRK4;nc|ENSG00000125388|P32298-4|GRK4;nc|ENSG00000125388|P32298-2|GRK4;ENSG00000125388|ENST00000398052|GRK4	nc|ENSG00000125388|P32298-3|GRK4	nc|ENSG00000125388|P32298-3|GRK4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.8587646484375	2	604.859129	1207.70371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.288	1	81.403	80.903	81.903	0.11426								0	0	0	0.45132	1	7736	7736		18.262	0	1				5267	3386	3624	3627	5863	5863					0.10816170071393572
DTKPTLKRHI	10	Unmodified	_DTKPTLKRHI_					0	0	0		nc|ENSG00000125388|P32298-3|GRK4;nc|ENSG00000125388|P32298-4|GRK4;nc|ENSG00000125388|P32298-2|GRK4;ENSG00000125388|ENST00000398052|GRK4	nc|ENSG00000125388|P32298-3|GRK4	nc|ENSG00000125388|P32298-3|GRK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8585205078125	2	604.859129	1207.70371	0.22273	0.00013472	-1.1358	-0.00068697	-0.91302	-0.00055225	604.8583327420461	82.105	1.1205	82.531	81.753	82.873	0.42645					96	27	4	0	0	0	0.81191	1	9410	9410		33.922	6.0394	1	3330300			5268	3386	3624	3627	5864	5864					0.10816170071393572
DTKPTLKRHI	10	Unmodified	_DTKPTLKRHI_					0	0	0		nc|ENSG00000125388|P32298-3|GRK4;nc|ENSG00000125388|P32298-4|GRK4;nc|ENSG00000125388|P32298-2|GRK4;ENSG00000125388|ENST00000398052|GRK4	nc|ENSG00000125388|P32298-3|GRK4	nc|ENSG00000125388|P32298-3|GRK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8588256835938	2	604.859129	1207.70371	0.044967	2.7199E-05	-0.8945	-0.00054104	-0.84953	-0.00051385	604.8584867584212	80.792	1.0733	81.319	80.907	81.98	0.52676					69	21	4	0	0	0	0.36622	1	9316	9316		54.722	9.7001	1	4362400			5269	3386	3624	3627	5865	5865					0.10816170071393572
DTKSSKMPTKV	11	Unmodified	_DTKSSKMPTKV_					0	0	0			REV__ENSG00000175115|ENST00000320580|PACS1	REV__ENSG00000175115|ENST00000320580|PACS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3319091796875	2	611.329013	1220.64347	-0.91836	-0.00056142	1.2223	0.00074726	0.30398	0.00018583	611.32977638209	78.511	1.062	78.605	78.288	79.35	0.0942					75	32	4	0	0	0	0.66009	1	7351	7351		37.508	4.6958	1	422640	+		5270	22041	3625	3628	5866	5866					0.04197691625972766
DTLARDEF	8	Unmodified	_DTLARDEF_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7293395996094	2	483.729989	965.445425	-0.32675	-0.00015806	-2.37	-0.0011464	-2.6967	-0.0013045	483.72872071539695	73.085	0.99957	73.639	72.943	73.942	0.55386					71	26	4	0	0	0	0.93786	1	8217	8217		53.351	7.3995	1	1309200			5271	3498	3626	3629	5867	5867					-0.03867986241516519
DTLHGIVWQI	10	Unmodified	_DTLHGIVWQI_					0	0	0			REV__ENSG00000148335|ENST00000372483|NTMT1	REV__ENSG00000148335|ENST00000372483|NTMT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	591.3212280273438	2	591.319306	1180.62406	-2.1672	-0.0012815	3.0968	0.0018312	0.92953	0.00054965	591.320992459415	66.799	0.86491	66.827	66.467	67.332	0.02858					92	41	3	0	0	0	0.82886	1	6328	6328		37.812	2.6595	1	233490	+		5272	20107	3627	3630	5868	5868					0.040971033973846716
DTLKALSHML	10	Unmodified	_DTLKALSHML_					0	0	0			REV__nc|ENSG00000047644|Q9ULE0-2|WWC3	REV__nc|ENSG00000047644|Q9ULE0-2|WWC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.8106079101562	2	564.807716	1127.60088	3.0107	0.0017004	1.8168	0.0010261	4.8274	0.0027266	564.8086416193407	110	1.6919	109.97	109.64	111.33	-0.027641					152	59	3	0	0	0	0.80179	1	12198	12198		39.253	2.0937	1	4099500	+		5273	16357	3628	3631	5869	5869					0.04218341288378724
DTLLDIMRR	9	Oxidation (M)	_DTLLDIM(Oxidation (M))RR_		DTLLDIM(1)RR		DTLLDIM(69)RR	0	0	1		nc|ENSG00000156510|Q2TB90-2|HKDC1;ENSG00000156510|ENST00000354624|HKDC1;nc|ENSG00000156510|Q2TB90-3|HKDC1	nc|ENSG00000156510|Q2TB90-2|HKDC1;nc|ENSG00000156510|Q2TB90-3|HKDC1	nc|ENSG00000156510|Q2TB90-3|HKDC1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.8062744140625	2	574.808248	1147.60194	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.392	1	33.562	33.062	34.062	0.16971								0	0	0	0.19249	1	2402	2402		68.787	7.0955	1				5274	15016;15015	3629	3632	5870	5870		217			0.034045556572891655
DTLTKDHS	8	Unmodified	_DTLTKDHS_					0	0	0			REV__ENSG00000221944|ENST00000408957|TIGD1	REV__ENSG00000221944|ENST00000408957|TIGD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7204284667969	2	458.722164	915.429775	1.7357	0.00079621	-1.367	-0.00062708	0.36869	0.00016913	458.7213703010642	26.883	0.40254	26.542	26.323	26.725	-0.34035					15	8	2	0	0	0	0.884	1	1528	1528		33.516	1.9858	1	72825	+		5275	23717	3630	3633	5871	5871					-0.03132272758568888
DTLTKDHS	8	Unmodified	_DTLTKDHS_					0	0	0			REV__ENSG00000221944|ENST00000408957|TIGD1	REV__ENSG00000221944|ENST00000408957|TIGD1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	458.722164	915.429775	-0.78544	-0.0003603	0.87157	0.00039981	0.086134	3.9512E-05	458.72242816578495	26.844	0.58429	26.668	26.431	27.016	-0.17559	0.06303	0.0010486	NaN	33.516	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60586	+		5276	23717	3630	3633							-0.03132272758568888
DTLTKDHS	8	Unmodified	_DTLTKDHS_					0	0	0			REV__ENSG00000221944|ENST00000408957|TIGD1	REV__ENSG00000221944|ENST00000408957|TIGD1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	458.722164	915.429775	1.7357	0.00079621	-1.367	-0.00062708	0.36869	0.00016913	458.7213703010642	26.883	0.40254	26.542	26.323	26.725	-0.34035	-0.06303	-0.0010051	NaN	33.516	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72825	+		5277	23717	3630	3633							-0.03132272758568888
DTLVFFFFL	9	Unmodified	_DTLVFFFFL_					0	0	0		ENST00000479872.5_1_1:165877514-165877814:+|nuORF	ENST00000479872.5_1_1:165877514-165877814:+|nuORF	ENST00000479872.5_1_1:165877514-165877814:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.8070678710938	2	574.804968	1147.59538	-0.92197	-0.00052995	4.3372	0.002493	3.4152	0.0019631	574.8069824667461	33.956	0.7061	33.951	33.628	34.334	-0.0047379					37	16	4	0	0	0	0.67235	1	2021	2021		42.474	4.6629	1	142260			5278	12423	3631	3634	5872	5872					0.027489857682439833
DTNIYFPGIII	11	Unmodified	_DTNIYFPGIII_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3688354492188	2	633.342446	1264.67034	0.90211	0.00057134	-4.256	-0.0026955	-3.3539	-0.0021242	633.3390279973215	97.362	0.1656	97.525	97.463	97.628	0.16316					5	3	2	0	0	0	0.17226	1	10082	10082		35.152	7.0705	1	52544	+		5279	18069	3632	3635	5873	5873					0.048591235088224494
DTNQLCHA	8	Unmodified	_DTNQLCHA_					0	0	0			REV__ENSG00000086570|ENST00000261800|FAT2	REV__ENSG00000086570|ENST00000261800|FAT2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.8595886230469	2	451.195259	900.375965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.381	1	71.512	71.012	72.012	0.1301								0	0	0	0.3055	1	6508	6508		44.117	5.3107	1		+		5280	16912	3633	3636	5874	5874					-0.07820768461942862
DTPASKRKCT	10	Unmodified	_DTPASKRKCT_					0	0	0			REV__ENSG00000111046|ENST00000228641|MYF6	REV__ENSG00000111046|ENST00000228641|MYF6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.8316650390625	2	553.784773	1105.55499	-1.3071	-0.00072388	1.9526	0.0010813	0.64545	0.00035744	553.7857368394277	84.146	0.56338	84.284	84.005	84.568	0.13811					23	12	3	0	0	0	0.37624	1	8095	8095		21.686	0	1	63993	+		5281	17845	3634	3637	5875	5875					0.006436961061581314
DTPLLVLLL	9	Unmodified	_DTPLLVLLL_					0	0	0			REV__ENSG00000175899|ENST00000318602|A2M	REV__ENSG00000175899|ENST00000318602|A2M	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.81805419921875	2	498.820618	995.626684	0.17031	8.4956E-05	-3.1042	-0.0015484	-2.9338	-0.0014635	498.8189067868914	38.993	0.98392	38.963	38.538	39.522	-0.03027					63	22	4	0	0	0	0.7932	1	2729	2729		26.796	4.8362	1	875250	+		5282	22090	3635	3638	5876	5876					0.12869558802344727
DTPLRPAR	8	Unmodified	_DTPLRPAR_					0	0	0		nc|ENSG00000122224|Q9HBG7-2|LY9;nc|ENSG00000122224|Q9HBG7-4|LY9;ENSG00000122224|ENST00000263285|LY9	nc|ENSG00000122224|Q9HBG7-2|LY9	nc|ENSG00000122224|Q9HBG7-2|LY9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.7412414550781	2	463.264333	924.514114	-0.29955	-0.00013877	-1.6733	-0.00077516	-1.9728	-0.00091393	463.26373695781797	51.122	0.70479	51.557	51.243	51.948	0.43505					17	16	2	0	0	0	0.4196	1	5039	5039		29.15	14.285	1	90832			5283	3215	3636	3639	5877	5877					0.048837228488423534
DTPTQQLD	8	Unmodified	_DTPTQQLD_					0	0	0			REV__nc|ENSG00000138119|Q9NZM1-2|MYOF	REV__nc|ENSG00000138119|Q9NZM1-2|MYOF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.2779541015625	2	459.214172	916.413791	-2.4102	-0.0011068	-2.199	-0.0010098	-4.6092	-0.0021166	459.21320850552576	41.994	0.46582	42.407	42.2	42.666	0.4139					14	11	2	0	0	0	0.4196	1	3737	3737		39.253	4.0521	1	189700	+		5284	29884	3637	3640	5878	5878					-0.04775978995473906
DTQTFGSKYG	10	Unmodified	_DTQTFGSKYG_					0	0	0			REV__ENSG00000141449|ENST00000424526|GREB1L	REV__ENSG00000141449|ENST00000424526|GREB1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.25341796875	2	552.253828	1102.4931	1.2806	0.00070722	-0.73852	-0.00040785	0.5421	0.00029938	552.2532948797596	111.44	1.2081	111.47	110.85	112.06	0.030388					69	46	2	0	0	0	0.86218	2	12236	12217;12236		32.812	4.9673	1	33256	+		5285	19687	3638	3641	5879;5880	5880					-0.05404332041325688
DTQTKISQGHH	11	Unmodified	_DTQTKISQGHH_					0	0	0			REV__ENSG00000188033|ENST00000311437|ZNF490	REV__ENSG00000188033|ENST00000311437|ZNF490	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.28948974609375	3	417.874064	1250.60036	0.50847	0.00021248	0.41039	0.00017149	0.91886	0.00038397	418.2083085995724	75.795	0.42877	75.928	75.645	76.074	0.13325					15	11	2	0	0	0	0.17432	1	7063	7063		39.873	18.841	1	41467	+		5286	22972	3639	3642	5881	5881					-0.014913621071173111
DTQTQCKAV	9	Unmodified	_DTQTQCKAV_					0	0	0			REV__ENSG00000169951|ENST00000395091|ZNF764	REV__ENSG00000169951|ENST00000395091|ZNF764	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.2350769042969	2	497.237124	992.459695	-0.19864	-9.8772E-05	-3.1466	-0.0015646	-3.3452	-0.0016634	497.23537485452226	30.419	0.8618	30.372	30.011	30.873	-0.047064					55	21	4	0	0	0	0.33718	1	1669	1669		62.107	1.9892	1	283960	+		5287	21619	3640	3643	5882	5882					-0.036836570848890915
DTRAPRSLVAS	11	Unmodified	_DTRAPRSLVAS_					0	0	0		ENST00000606285.1_1_6:711150-711348:-|nuORF	ENST00000606285.1_1_6:711150-711348:-|nuORF	ENST00000606285.1_1_6:711150-711348:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.82421875	2	586.822744	1171.63093	-0.26066	-0.00015296	2.0511	0.0012036	1.7905	0.0010507	586.8238105998267	110.35	1.3355	110.35	110.09	111.43	0					132	40	5	0	0	0	0.72106	1	11506	11506		28.081	1.3886	1	4860400			5288	14446	3641	3644	5883	5883					0.05198416277949036
DTSRLPSFPHC	11	Unmodified	_DTSRLPSFPHC_					0	0	0		ENST00000392025.5_1_19:41081416-41081590:+|nuORF	ENST00000392025.5_1_19:41081416-41081590:+|nuORF	ENST00000392025.5_1_19:41081416-41081590:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.295166015625	2	630.295504	1258.57646	0.64029	0.00040357	1.7724	0.0011171	2.4127	0.0015207	630.2965544942194	23.374	0.99222	23.435	23.057	24.05	0.060431					84	35	3	0	0	0	0.74763	1	755	755		22.58	0.89391	1	334210			5289	11006	3642	3645	5884	5884					-0.042489188650961296
DTTHSPWH	8	Unmodified	_DTTHSPWH_					0	0	0		ENSG00000185085|ENST00000330574|INTS5	ENSG00000185085|ENST00000330574|INTS5	ENSG00000185085|ENST00000330574|INTS5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.7137756347656	2	490.714673	979.414794	0.74837	0.00036723	-3.0758	-0.0015094	-2.3275	-0.0011421	490.71321219313154	95.724	0.92799	95.887	95.433	96.361	0.16317					54	21	4	0	0	0	0.93529	1	9850	9850		52.299	20.344	1	350100			5290	7678	3643	3646	5885	5885					-0.07573719835909287
DTTHSPWH	8	Unmodified	_DTTHSPWH_					0	0	0		ENSG00000185085|ENST00000330574|INTS5	ENSG00000185085|ENST00000330574|INTS5	ENSG00000185085|ENST00000330574|INTS5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	490.714673	979.414794	-0.64401	-0.00031603	-1.1443	-0.00056153	-1.7883	-0.00087756	490.71392114118055	95.493	0.92154	95.724	95.388	96.31	0.23103	-0.13257	4.6624E-05	NaN	52.299	46	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	335050			5291	7678	3643	3646							-0.07573719835909287
DTTHSPWH	8	Unmodified	_DTTHSPWH_					0	0	0		ENSG00000185085|ENST00000330574|INTS5	ENSG00000185085|ENST00000330574|INTS5	ENSG00000185085|ENST00000330574|INTS5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	490.714673	979.414794	-1.6452	-0.00080733	-0.025719	-1.2621E-05	-1.6709	-0.00081995	490.7144244996112	95.756	0.93005	95.958	95.515	96.445	0.20242	0.10209	0.0011444	NaN	52.299	48	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	322810			5292	7678	3643	3646							-0.07573719835909287
DTTIEKKTTVM	11	Unmodified	_DTTIEKKTTVM_					0	0	0			REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|15|1|sense	REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|15|1|sense	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.8324584960938	2	633.834128	1265.6537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.998	1	68.998	68.498	69.498	0								0	0	0	0.56276	1	6141	6141		41.427	5.109	1		+		5293	29504	3644	3647	5886	5886					0.031502545605235355
DTTKMWKLLK	10	Unmodified	_DTTKMWKLLK_					0	0	0			REV__ENST00000377989.8_2_6:25115289-25137913:-|nuORF	REV__ENST00000377989.8_2_6:25115289-25137913:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	632.3643798828125	2	632.360116	1262.70568	0.93196	0.00058934	0.84189	0.00053238	1.7739	0.0011217	632.3603742027793	102.95	0.59602	103.08	102.81	103.4	0.12622					46	14	4	0	0	0	0.80179	1	10885	10885		39.253	2.8061	1	10639000	+		5294	25880	3645	3648	5887	5887					0.0848346276495704
DTTPKKPLWGT	11	Unmodified	_DTTPKKPLWGT_					0	0	0		L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|71|2|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|71|2|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|71|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3358764648438	2	622.337695	1242.66084	0.74466	0.00046343	-2.6768	-0.0016659	-1.9322	-0.0012025	622.3359336056161	110.94	1.6886	110.97	110.28	111.96	0.031738					155	57	4	0	0	0	0.67778	1	12176	12176		35.152	2.3396	1	299380			5295	14568	3646	3649	5888	5888					0.0492135522326862
DTTQLGTTI	9	Unmodified	_DTTQLGTTI_					0	0	0			REV__ENSG00000134569|ENST00000378623|LRP4	REV__ENSG00000134569|ENST00000378623|LRP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.2430725097656	2	475.245472	948.476391	-0.38989	-0.00018529	0.038415	1.8257E-05	-0.35147	-0.00016703	475.2453614828435	32.061	0.60071	32.168	31.888	32.488	0.10707					23	13	2	0	0	0	0.58668	1	2219	2219		47.657	1.7054	1	266400	+		5296	19151	3647	3650	5889	5889					9.1670727329074E-05
DTVFTCIIF	9	Unmodified	_DTVFTCIIF_					0	0	0		ENSG00000148331|ENST00000277458|ASB6	ENSG00000148331|ENST00000277458|ASB6	ENSG00000148331|ENST00000277458|ASB6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.277587890625	2	529.764986	1057.51542	0.5412	0.00028671	2.2821	0.001209	2.8233	0.0014957	529.7661461022229	62.13	0.4599	62.096	61.801	62.261	-0.033173					18	14	2	0	0	0	0.20789	1	5845	5845		12.207	0	1	240270			5297	4948	3648	3651	5890	5890					-0.01103823897278744
DTVGSVRN	8	Unmodified	_DTVGSVRN_					0	0	0			REV__ENST00000590839.5_1_19:12885462-12889138:-|nuORF	REV__ENST00000590839.5_1_19:12885462-12889138:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.218505859375	2	424.217049	846.419545	2.8621	0.0012142	0.58071	0.00024635	3.4428	0.0014605	424.2172299005605	101.48	1.8959	101.53	100.85	102.75	0.044823					89	45	3	0	0	0	0.84341	1	11003	11003		24.203	0	1	2047000	+		5298	29190	3649	3652	5891	5891					-0.009808356931443996
DTVKDCVDI	9	Unmodified	_DTVKDCVDI_					0	0	0		nc|ENSG00000124831|Q32MZ4-3|LRRFIP1;nc|ENSG00000124831|Q32MZ4-2|LRRFIP1;nc|ENSG00000124831|Q32MZ4|LRRFIP1	nc|ENSG00000124831|Q32MZ4-3|LRRFIP1	nc|ENSG00000124831|Q32MZ4-3|LRRFIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.23846435546875	2	504.239332	1006.46411	-0.14012	-7.0655E-05	-0.54578	-0.0002752	-0.6859	-0.00034586	504.2389281783913	47.666	0.74471	48.589	48.317	49.062	0.92315					36	18	3	0	0	0	0.30689	1	4569	4569		64.207	6.396	1	1344900			5299	14890	3650	3653	5892	5892					-0.03886192661968835
DTVKDCVDI	9	Unmodified	_DTVKDCVDI_					0	0	0		nc|ENSG00000124831|Q32MZ4-3|LRRFIP1;nc|ENSG00000124831|Q32MZ4-2|LRRFIP1;nc|ENSG00000124831|Q32MZ4|LRRFIP1	nc|ENSG00000124831|Q32MZ4-3|LRRFIP1	nc|ENSG00000124831|Q32MZ4-3|LRRFIP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	504.239332	1006.46411	-1.2441	-0.0006273	0.58718	0.00029608	-0.65688	-0.00033122	504.2394950836119	47.854	0.62617	48.324	48.082	48.708	0.46941	-0.13277	0.00056272	NaN	64.207	38	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1147800			5300	14890	3650	3653							-0.03886192661968835
DTVKLCQLL	9	Unmodified	_DTVKLCQLL_					0	0	0			REV__nc|ENSG00000176225|Q86VV8-3|RTTN	REV__nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.793212890625	2	516.791535	1031.56852	0.6767	0.00034971	2.7491	0.0014207	3.4258	0.0017704	516.7929283696592	86.202	2.6305	86.258	84.584	87.215	0.055641					143	60	4	0	0	0	0.76764	1	8774	8774		34.173	3.8548	1	319120	+		5301	22116	3651	3654	5893	5893					0.05399553885399655
DTVVFDPARGQ	11	Unmodified	_DTVVFDPARGQ_					0	0	0		ENST00000494418.1_1_1:161068255-161069412:+|nuORF;nc|ENSG00000162755|Q8NEP7-3|KLHDC9;nc|ENSG00000162755|Q8NEP7-2|KLHDC9;ENSG00000162755|ENST00000368011|KLHDC9	ENST00000494418.1_1_1:161068255-161069412:+|nuORF	ENST00000494418.1_1_1:161068255-161069412:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	602.8026123046875	2	602.801477	1203.5884	0.65075	0.00039227	-1.1905	-0.00071761	-0.53971	-0.00032534	602.8006043046089	72.774	0.78786	72.904	72.521	73.309	0.13064					71	26	4	0	0	0	0.58425	1	6714	6714		45.972	5.1941	1	436040			5302	5732	3652	3655	5894	5894					-0.005249788502851516
DTVVGDTLIL	10	Unmodified	_DTVVGDTLIL_					0	0	0			REV__nc|ENSG00000178773|Q9UBL6|CPNE7	REV__nc|ENSG00000178773|Q9UBL6|CPNE7	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3033447265625	2	523.292422	1044.57029	-0.79711	-0.00041712	-4.0388	-0.0021135	-4.8359	-0.0025306	523.2900613520414	89.279	0.17205	89.279	89.215	89.387	0					5	3	2	0	0	0	0.37624	1	8634	8634		19.104	0	1	58355	+		5303	30060	3653	3656	5895	5895					0.04978886175035768
DTVVRVRV	8	Unmodified	_DTVVRVRV_					0	0	0			REV__ENSG00000179598|ENST00000321560|PLD6	REV__ENSG00000179598|ENST00000321560|PLD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2878723144531	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.85277	1	10129	10129		25.45	0	1	50946000	+		5304	22344	3654	3657	5896	5896					0.08748582400005489
DTYTYPYFH	9	Unmodified	_DTYTYPYFH_					0	0	0			REV__ENSG00000165923|ENST00000525123|AGBL2	REV__ENSG00000165923|ENST00000525123|AGBL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	603.7606811523438	2	603.758746	1205.50294	1.0371	0.00062618	-0.34035	-0.00020549	0.69678	0.00042069	603.759267276611	112.18	0.092255	112.28	112.2	112.29	0.10638					6	2	3	0	0	0	0.7932	1	12079	12079		13.775	0	1	2754600	+		5305	21235	3655	3658	5897	5897					-0.09159144035970712
DTYTYPYFH	9	Unmodified	_DTYTYPYFH_					0	0	0			REV__ENSG00000165923|ENST00000525123|AGBL2	REV__ENSG00000165923|ENST00000525123|AGBL2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	603.758746	1205.50294	1.0371	0.00062618	-0.34035	-0.00020549	0.69678	0.00042069	603.759267276611	112.18	0.092255	112.28	112.2	112.29	0.10638	0.19538	0.00047363	NaN	13.775	6	2	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2754600	+		5306	21235	3655	3658							-0.09159144035970712
DTYTYPYFH	9	Unmodified	_DTYTYPYFH_					0	0	0			REV__ENSG00000165923|ENST00000525123|AGBL2	REV__ENSG00000165923|ENST00000525123|AGBL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	603.758746	1205.50294	-1.2772	-0.00077113	-1.0168	-0.00061388	-2.294	-0.001385	603.7590273932284	111.91	0.072159	111.89	111.83	111.9	-0.019882	-0.19538	-0.00034314	NaN	13.775	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	780430	+		5307	21235	3655	3658							-0.09159144035970712
DVATLQIV	8	Unmodified	_DVATLQIV_					0	0	0			REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.75030517578125	2	429.750193	857.485833	-1.7422	-0.0007487	2.3085	0.00099207	0.56632	0.00024338	429.7510562737313	35.44	2.4929	35.471	35.255	37.748	0.031132					176	69	3	0	0	0	0.60357	2	1865	1865;1895		71.296	12.514	1	1409200	+		5308	20205	3656	3659	5898;5899	5898					0.05138980148922201
DVATLQIV	8	Unmodified	_DVATLQIV_					0	0	0			REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.7499694824219	2	429.750193	857.485833	-1.7334	-0.00074493	0.77902	0.00033479	-0.95437	-0.00041014	429.7503701051042	40.361	2.4974	40.367	40.029	42.526	0.0065002					186	77	3	0	0	0	0.79403	1	2530	2530		63.306	2.3343	1	3826800	+		5309	20205	3656	3659	5900	5900					0.05138980148922201
DVATLQIV	8	Unmodified	_DVATLQIV_					0	0	0			REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.7501525878906	2	429.750193	857.485833	0.14732	6.3313E-05	0.46597	0.00020025	0.6133	0.00026357	429.7502450669041	35.27	2.574	35.376	35.139	37.713	0.10604					195	79	3	0	0	0	0.66521	4	1883	1843;1861;1872;1883		68.787	7.3995	1	1419900	+		5310	20205	3656	3659	5901;5902;5903;5904	5904					0.05138980148922201
DVATLQIV	8	Unmodified	_DVATLQIV_					0	0	0			REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.7503662109375	2	429.750193	857.485833	0.008359	3.5923E-06	0.60443	0.00025975	0.61279	0.00026335	429.7502794012024	35.489	2.8966	35.429	35.209	38.105	-0.060337					197	86	4	0	0	0	0.42407	6	1878	1859;1869;1878;1890;1902;1921		79.451	10.664	1	1630800	+		5311	20205	3656	3659	5905;5906;5907;5908;5909;5910	5907					0.05138980148922201
DVATLQIV	8	Unmodified	_DVATLQIV_					0	0	0			REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.749755859375	2	429.750193	857.485833	-0.15763	-6.7743E-05	-0.95449	-0.00041019	-1.1121	-0.00047794	429.7496181624476	40.277	2.7409	40.229	39.975	42.716	-0.04789					188	88	4	0	0	0	0.72312	1	2524	2524		66.429	0	1	4300300	+		5312	20205	3656	3659	5911	5911					0.05138980148922201
DVATLQIV	8	Unmodified	_DVATLQIV_					0	0	0			REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7489929199219	2	429.750193	857.485833	-2.154	-0.00092569	1.0157	0.0004365	-1.1383	-0.00048919	429.75051038702645	40.625	2.1327	41.017	40.832	42.965	0.39209					111	57	2	0	0	0	0.87064	2	3548	3548;3573		58.782	3.2778	1	10174000	+		5313	20205	3656	3659	5912;5913	5912					0.05138980148922201
DVATLQIV	8	Unmodified	_DVATLQIV_					0	0	0			REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7506408691406	2	429.750193	857.485833	1.5892	0.00068294	-0.58551	-0.00025162	1.0037	0.00043132	429.74995933180253	34.855	1.9588	35.237	34.934	36.893	0.3812					144	49	4	0	0	0	0.91472	1	2695	2695		44.117	0	1	5947200	+		5314	20205	3656	3659	5914	5914					0.05138980148922201
DVATLQIV	8	Unmodified	_DVATLQIV_					0	0	0			REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	429.750193	857.485833	-1.8662	-0.00080199	0.79188	0.00034031	-1.0743	-0.00046168	429.7503427915854	40.882	1.8878	40.882	40.647	42.535	0	-0.067175	-9.0759E-05	NaN	58.782	112	54	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	674540	+		5315	20205	3656	3659							0.05138980148922201
DVATVIQI	8	Unmodified	_DVATVIQI_					0	0	0			REV__ENST00000475707.5_1_3:15045421-15079667:+|nuORF	REV__ENST00000475707.5_1_3:15045421-15079667:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7512512207031	2	429.750193	857.485833	1.5892	0.00068294	-0.58551	-0.00025162	1.0037	0.00043132	429.74995933180253	34.855	1.9588	35.237	34.934	36.893	0.3812					144	49	4	0	0	0	0.89494	1	2659	2659		37.159	1.5408	1	5947200	+		5316	22205	3657	3660	5915	5915					0.05138980148910832
DVAVCFVC	8	Unmodified	_DVAVCFVC_					0	0	0		ENST00000530023.5_2_11:31484759-31531097:-|nuORF	ENST00000530023.5_2_11:31484759-31531097:-|nuORF	ENST00000530023.5_2_11:31484759-31531097:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.18798828125	2	428.1906	854.366646	0.13282	5.6873E-05	-4.1605	-0.0017815	-4.0277	-0.0017246	428.18872922690895	94.107	1.8536	94.542	93.224	95.077	0.43539					86	46	2	0	0	0	0.87276	2	11243	11221;11243		31.579	4.3914	1	1237400			5317	13337	3658	3661	5916;5917	5917					-0.0663625307181519
DVAVDRFMV	9	Unmodified	_DVAVDRFMV_					0	0	0			REV__ENST00000477900.6_1_19:38135418-38138750:-|nuORF	REV__ENST00000477900.6_1_19:38135418-38138750:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7817993164062	2	526.265684	1050.51682	-0.38955	-0.00020501	0.47183	0.00024831	0.082282	4.3302E-05	526.2660636176722	47.367	0.38632	47.838	47.735	48.121	0.47139					11	9	2	0	0	0	0.20789	1	4547	4547		42.396	9.5837	1	616170	+		5318	18430	3659	3662	5918	5918					-0.00642189808513649
DVAVFEAVSS	10	Unmodified	_DVAVFEAVSS_					0	0	0		ENST00000479587.1_1_2:207024402-207025435:+|nuORF;ENST00000460760.1_1_2:207024637-207025435:+|nuORF;ENSG00000114942|ENST00000392222|EEF1B2	ENST00000479587.1_1_2:207024402-207025435:+|nuORF	ENST00000479587.1_1_2:207024402-207025435:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2617797851562	2	512.253297	1022.49204	-0.38169	-0.00019552	1.3498	0.00069142	0.96807	0.0004959	512.2538769688313	54.312	1.3388	54.263	53.816	55.154	-0.049274					65	39	2	0	0	0	0.8608	1	4562	4562		34.173	1.3601	1	691410			5319	2800	3660	3663	5919	5919					-0.018305464102354563
DVCKKLLGKYP	11	Unmodified	_DVCKKLLGKYP_					0	0	0		ENSG00000148154|ENST00000374279|UGCG	ENSG00000148154|ENST00000374279|UGCG	ENSG00000148154|ENST00000374279|UGCG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.3636474609375	2	632.360116	1262.70568	-0.02147	-1.3577E-05	1.836	0.001161	1.8145	0.0011474	632.3610016649177	103.12	0.68491	103.12	102.79	103.47	0					54	16	4	0	0	0	0.48529	1	10587	10587		52.937	8.5595	1	23395000			5320	4935	3661	3664	5920	5920					0.08483462764979777
DVCKKLLGKYP	11	Unmodified	_DVCKKLLGKYP_					0	0	0		ENSG00000148154|ENST00000374279|UGCG	ENSG00000148154|ENST00000374279|UGCG	ENSG00000148154|ENST00000374279|UGCG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	632.3624267578125	2	632.360116	1262.70568	2.8299	0.0017895	-1.2832	-0.00081145	1.5467	0.00097805	632.3591459550191	103.07	0.58058	103.02	102.74	103.32	-0.047005					42	13	4	0	0	0	0.64498	1	11276	11276		39.253	0	1	4964300			5321	4935	3661	3664	5921	5921					0.08483462764979777
DVCKKLLGKYP	11	Unmodified	_DVCKKLLGKYP_					0	0	0		ENSG00000148154|ENST00000374279|UGCG	ENSG00000148154|ENST00000374279|UGCG	ENSG00000148154|ENST00000374279|UGCG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.3632202148438	2	632.360116	1262.70568	1.4622	0.00092464	0.32319	0.00020437	1.7854	0.001129	632.3600041091405	102.87	1.0018	103.05	102.35	103.36	0.18298					61	24	4	0	0	0	0.58425	1	10868	10868		45.972	0	1	9578200			5322	4935	3661	3664	5922	5922					0.08483462764979777
DVCKKLLGKYP	11	Unmodified	_DVCKKLLGKYP_					0	0	0		ENSG00000148154|ENST00000374279|UGCG	ENSG00000148154|ENST00000374279|UGCG	ENSG00000148154|ENST00000374279|UGCG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	632.3622436523438	2	632.360116	1262.70568	0.93196	0.00058934	0.84189	0.00053238	1.7739	0.0011217	632.3603742027793	102.95	0.59602	103.08	102.81	103.4	0.12622					46	14	4	0	0	0	0.43778	2	10871	10859;10871		56.434	3.4971	1	10639000			5323	4935	3661	3664	5923;5924	5924					0.08483462764979777
DVCPRKAL	8	Unmodified	_DVCPRKAL_					0	0	0			REV__ENSG00000172123|ENST00000304905|SLFN12	REV__ENSG00000172123|ENST00000304905|SLFN12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.24822998046875	2	451.249837	900.485122	-0.97999	-0.00044222	-1.1427	-0.00051564	-2.1227	-0.00095786	451.24921015554173	65.724	1.4568	65.769	65.089	66.546	0.045113					104	74	2	0	0	0	0.87479	1	5797	5797		30.504	0.6621	1	906430	+		5324	21803	3662	3665	5925	5925					0.0308986222820522
DVDECSDGLP	10	Unmodified	_DVDECSDGLP_					0	0	0			REV__ENSG00000119681|ENST00000261978|LTBP2	REV__ENSG00000119681|ENST00000261978|LTBP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.277099609375	2	525.208229	1048.40191	0.75182	0.00039486	4.079	0.0021423	4.8308	0.0025372	525.2102550199025	77.207	0.38226	77.612	77.425	77.807	0.40531					13	8	2	0	0	0	0.37624	1	8776	8776		20.947	0	1	166860	+		5325	18367	3663	3666	5926	5926					-0.12035963800963145
DVDFNCLDVLI	11	Unmodified	_DVDFNCLDVLI_					0	0	0		nc|ENSG00000048707|Q5THJ4-2|VPS13D;ENSG00000048707|ENST00000620676|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.3687744140625	2	633.307746	1264.60094	1.2637	0.00080033	1.3482	0.00085381	2.6119	0.0016541	633.3077650214163	97.699	0.17413	97.748	97.663	97.837	0.048164					5	3	2	0	0	0	0.17376	1	10409	10409		26.063	0	1	16529			5326	977	3664	3667	5927	5927					-0.020777035022774726
DVDHPPTLVR	10	Unmodified	_DVDHPPTLVR_					0	0	0			REV__ENSG00000076826|ENST00000160298|CAMSAP3	REV__ENSG00000076826|ENST00000160298|CAMSAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.8033447265625	2	574.806562	1147.59857	0.48446	0.00027847	-0.40177	-0.00023094	0.082685	4.7528E-05	574.8061834619125	33.892	0.55391	33.938	33.653	34.207	0.045853					44	25	2	0	0	0	0.86348	1	1696	1696		31.53	0	1	186370	+		5327	16731	3665	3668	5928	5928					0.030676288749418745
DVDPMSINPAK	11	Unmodified	_DVDPMSINPAK_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.7787475585938	2	593.792263	1185.56997	0.50342	0.00029893	-2.8212	-0.0016752	-2.3178	-0.0013763	593.7906122430434	34.679	0.44018	34.889	34.687	35.127	0.21003					16	10	2	0	0	0	0.17347	1	2571	2571		29.17	18.905	1	120950	+		5328	18623	3666	3669	5929	5929					-0.015388568165235483
DVDPMSINPAK	11	Unmodified	_DVDPMSINPAK_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	593.792263	1185.56997	1.1656	0.00069214	-3.8269	-0.0022724	-2.6613	-0.0015802	593.7897915656313	34.673	0.39672	35.054	34.852	35.249	0.3812	0.082575	-0.00084541	NaN	29.17	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129100	+		5329	18623	3666	3669							-0.015388568165235483
DVDRRKDE	8	Unmodified	_DVDRRKDE_					0	0	0			REV__nc|ENSG00000151849|Q9HC77-2|CENPJ	REV__nc|ENSG00000151849|Q9HC77-2|CENPJ	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7544555664062	2	516.757069	1031.49959	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.192	1	28.228	27.728	28.728	0.03607								0	0	0	0.29264	1	1323	1323		29.15	0.89528	1		+		5330	20273	3667	3670	5930	5930					-0.01490394089955771
DVEKLKPY	8	Unmodified	_DVEKLKPY_					0	0	0			REV__ENSG00000161980|ENST00000293860|POLR3K	REV__ENSG00000161980|ENST00000293860|POLR3K	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.27362060546875	2	496.276575	990.538597	-0.24206	-0.00012013	-1.8596	-0.0009229	-2.1017	-0.001043	496.2753499826284	23.354	0.63107	23.302	23.043	23.674	-0.052114					23	20	2	0	0	0	0.89494	1	825	825		37.159	1.5408	1	36494	+		5331	20787	3668	3671	5931	5931					0.04294938211717181
DVEKLKPY	8	Unmodified	_DVEKLKPY_					0	0	0			REV__ENSG00000161980|ENST00000293860|POLR3K	REV__ENSG00000161980|ENST00000293860|POLR3K	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	496.276575	990.538597	-0.87503	-0.00043426	-1.4692	-0.00072915	-2.3443	-0.0011634	496.27576716345703	23.363	0.56978	23.313	23.053	23.623	-0.050077	0.0056484	0.00012262	NaN	37.159	27	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28366	+		5332	20787	3668	3671							0.04294938211717181
DVELERIL	8	Unmodified	_DVELERIL_					0	0	0		nc|ENSG00000164327|Q6R327-3|RICTOR;ENSG00000164327|ENST00000357387|RICTOR;ENST00000510711.5_1_5:38971963-39074479:-|nuORF	nc|ENSG00000164327|Q6R327-3|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.7786560058594	2	493.779482	985.544411	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.404	1	80.51	80.01	81.01	0.10527								0	0	0	0.3055	1	7616	7616		44.117	6.9577	1				5333	15058	3669	3672	5932	5932					0.05106036723384477
DVELKLLKQR	10	Unmodified	_DVELKLLKQR_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.5912170410156	3	414.590717	1240.75032	0.21654	8.9776E-05	0.82894	0.00034367	1.0455	0.00043345	414.5911015658191	18.275	1.4533	17.654	17.447	18.9	-0.62141					70	32	3	0	0	0	0.71918	1	383	383		43.651	0.78652	1	4091800	+		5334	18307	3670	3673	5933	5933					0.13957609902627155
DVFSIIQEY	9	Unmodified	_DVFSIIQEY_					0	0	0		nc|ENSG00000168016|O15050|TRANK1;ENSG00000168016|ENST00000645898|TRANK1	nc|ENSG00000168016|O15050|TRANK1	nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	557.2770385742188	2	557.276772	1112.53899	1.8955	0.0010563	0.60912	0.00033945	2.5046	0.0013958	557.275594461144	100.94	0.50897	101.24	100.93	101.44	0.2999					44	12	5	0	0	0	0.039957	3	12246	12235;12246;12259		112.41	24.657	1	717600			5335	6357	3671	3674	5934;5935;5936	5935					-0.012776868590890444
DVFSIIQEY	9	Unmodified	_DVFSIIQEY_					0	0	0		nc|ENSG00000168016|O15050|TRANK1;ENSG00000168016|ENST00000645898|TRANK1	nc|ENSG00000168016|O15050|TRANK1	nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	557.2767333984375	2	557.276772	1112.53899	2.2979	0.0012806	0.25128	0.00014003	2.5492	0.0014206	557.2753899764856	100.99	0.52825	101.33	100.93	101.46	0.33736					43	12	5	0	0	0	0.010555	2	12285	12285;12296		132.76	45.004	1	692810			5336	6357	3671	3674	5937;5938	5937					-0.012776868590890444
DVFYLQPERSC	11	Unmodified	_DVFYLQPERSC_					0	0	0		nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ENSG00000146463|ENST00000314607|ZMYM4;ENSG00000147130|ENST00000314425|ZMYM3;nc|ENSG00000147130|Q14202-2|ZMYM3	nc|ENSG00000146463|Q5VZL5-3|ZMYM4;ENSG00000147130|ENST00000314425|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.8800048828125	3	452.879939	1355.61799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.527	1	18.601	18.101	19.101	0.073465								0	0	0	0.56276	1	300	300		23.378	3.0629	1				5337	4884;4849	3672	3675	5939	5939					-0.04559782896444631
DVGVPLRIRQL	11	Unmodified	_DVGVPLRIRQL_					0	0	0			REV__ENST00000357461.6_1_14:67937818-67938346:-|nuORF	REV__ENST00000357461.6_1_14:67937818-67938346:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.8880615234375	2	633.388054	1264.76155	-0.79334	-0.00050249	-3.6185	-0.0022919	-4.4118	-0.0027944	633.3858115557084	49.904	1.4514	49.904	49.018	50.469	0					50	33	2	0	0	0	0.66858	1	3920	3920		33.922	11.962	1	147250	+		5338	25413	3673	3676	5940	5940					0.13976431996798055
DVGVPLRIRQL	11	Unmodified	_DVGVPLRIRQL_					0	0	0			REV__ENST00000357461.6_1_14:67937818-67938346:-|nuORF	REV__ENST00000357461.6_1_14:67937818-67938346:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5928039550781	3	422.594461	1264.76155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.628	1	55.601	55.101	56.101	-0.027279								0	0	0	0.56276	1	5073	5073		22.562	0.78116	1		+		5339	25413	3673	3676	5941	5941					0.13976431996798055
DVGVPLRIRQL	11	Unmodified	_DVGVPLRIRQL_					0	0	0			REV__ENST00000357461.6_1_14:67937818-67938346:-|nuORF	REV__ENST00000357461.6_1_14:67937818-67938346:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	633.388054	1264.76155	0.47121	0.00029846	-5.067	-0.0032094	-4.5958	-0.0029109	633.3847257792735	49.766	1.2109	49.808	49.087	50.298	0.042236	-0.048234	-0.00082325	NaN	33.922	47	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144270	+		5340	25413	3673	3676							0.13976431996798055
DVIALNQK	8	Unmodified	_DVIALNQK_					0	0	0		ENSG00000182378|ENST00000381657|PLCXD1	ENSG00000182378|ENST00000381657|PLCXD1	ENSG00000182378|ENST00000381657|PLCXD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.76104736328125	2	450.761092	899.507631	1.2323	0.00055546	-1.3685	-0.00061685	-0.13621	-6.1398E-05	450.76030899885507	36.683	1.0386	37.156	36.819	37.858	0.47306					58	24	3	0	0	0	0.38363	1	2908	2908		90.777	0	1	680950			5341	7453	3674	3677	5942	5942					0.053857848974644185
DVIGSYKKW	9	Unmodified	_DVIGSYKKW_					0	0	0		ENSG00000182636|ENST00000649030|NDN	ENSG00000182636|ENST00000649030|NDN	ENSG00000182636|ENST00000649030|NDN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.2950439453125	2	548.295299	1094.57605	-1.2455	-0.00068291	1.0706	0.00058698	-0.17494	-9.5922E-05	548.2957876892873	49.467	0.69822	49.467	49.229	49.927	0					25	15	2	0	0	0	0.21969	2	3901	3901;3913		71.877	17.101	1	126160			5342	7466	3675	3678	5943;5944	5943					0.032540294773070855
DVILLTAIV	9	Unmodified	_DVILLTAIV_					0	0	0		ENST00000563168.1_1_16:67262616-67262820:+|nuORF;ENST00000562235.5_1_16:67262534-67263013:+|nuORF;ENST00000563271.5_1_16:67262538-67263013:+|nuORF;ENST00000567193.5_1_16:67262538-67263013:+|nuORF;ENSG00000168701|ENST00000304800|TMEM208	ENST00000563168.1_1_16:67262616-67262820:+|nuORF	ENST00000563168.1_1_16:67262616-67262820:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8049011230469	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.74721	1	2559	2559		37.159	1.5408	1	336090			5343	6427	3676	3679	5945	5945					0.11580985768227947
DVILTIRHKSK	11	Unmodified	_DVILTIRHKSK_					0	0	0			REV__ENSG00000101680|ENST00000389658|LAMA1	REV__ENSG00000101680|ENST00000389658|LAMA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26788330078125	3	437.269866	1308.78777	-1.7231	-0.00075344	-2.8954	-0.0012661	-4.6185	-0.0020195	437.26850375985913	50.916	1.5264	50.916	50.06	51.586	0					171	39	5	0	0	0	0.73647	1	4052	4052		25.068	4.0355	1	3001200	+		5344	17296	3677	3680	5946	5946					0.1457270116827658
DVILTIRHKSK	11	Unmodified	_DVILTIRHKSK_					0	0	0			REV__ENSG00000101680|ENST00000389658|LAMA1	REV__ENSG00000101680|ENST00000389658|LAMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.267822265625	3	437.269866	1308.78777	-0.071191	-3.113E-05	-4.4555	-0.0019482	-4.5267	-0.0019794	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.59831	1	4399	4399		44.639	4.7663	1	3270700	+		5345	17296	3677	3680	5947	5947					0.1457270116827658
DVILTIRHKSK	11	Unmodified	_DVILTIRHKSK_					0	0	0			REV__ENSG00000101680|ENST00000389658|LAMA1	REV__ENSG00000101680|ENST00000389658|LAMA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2677917480469	3	437.269866	1308.78777	-0.49223	-0.00021524	-4.0286	-0.0017616	-4.5208	-0.0019768	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.73277	1	3967	3967		25.892	2.5138	1	3262400	+		5346	17296	3677	3680	5948	5948					0.1457270116827658
DVILTIRHKSK	11	Unmodified	_DVILTIRHKSK_					0	0	0			REV__ENSG00000101680|ENST00000389658|LAMA1	REV__ENSG00000101680|ENST00000389658|LAMA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2680969238281	3	437.269866	1308.78777	-0.53561	-0.00023421	-3.9588	-0.0017311	-4.4944	-0.0019653	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.78083	1	4121	4121		15.337	0.64381	1	4132000	+		5347	17296	3677	3680	5949	5949					0.1457270116827658
DVIRLIMQY	9	Oxidation (M)	_DVIRLIM(Oxidation (M))QY_		DVIRLIM(1)QY		DVIRLIM(77)QY	0	0	1		ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.815185546875	2	583.815541	1165.61653	-1.0756	-0.00062793	1.3379	0.00078109	0.26235	0.00015316	583.8161840620558	75.076	0.75337	75.468	75.195	75.948	0.39145					38	17	3	0	0	0	0.18338	2	8489	8478;8489		77.318	30.861	1	684800			5348	3240	3678	3681	5950;5951	5951		64			0.040346278054357754
DVIRLIMQY	9	Oxidation (M)	_DVIRLIM(Oxidation (M))QY_		DVIRLIM(1)QY		DVIRLIM(93)QY	0	0	1		ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.8148803710938	2	583.815541	1165.61653	-0.38468	-0.00022458	0.37588	0.00021945	-0.0088001	-5.1376E-06	583.8156604816535	74.933	0.69255	75.498	75.208	75.901	0.56458					35	16	3	0	0	0	0.096326	1	8489	8489		93.143	45.486	1	676070			5349	3240	3678	3681	5952	5952		64			0.040346278054357754
DVIRLIMQY	9	Unmodified	_DVIRLIMQY_					0	0	0		ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.8180541992188	2	575.818084	1149.62162	-0.34592	-0.00019918	0.63431	0.00036525	0.2884	0.00016606	575.818255962873	87.002	1.2904	87.448	87.02	88.31	0.44628					71	30	4	0	0	0	0.039957	5	10191	10180;10191;10202;10213;10227		112.41	42.783	1	3283600			5350	3240	3678	3682	5953;5954;5955;5956;5957	5954					0.05278931668067344
DVIRLIMQY	9	Unmodified	_DVIRLIMQY_					0	0	0		ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8178100585938	2	575.818084	1149.62162	-1.1595	-0.00066766	1.351	0.00077791	0.19147	0.00011025	575.8186615346356	87.054	1.2431	87.508	87.144	88.387	0.45429					67	29	4	0	0	0	0.034797	5	10246	10225;10235;10246;10258;10271		115.49	40.533	1	3480000			5351	3240	3678	3682	5958;5959;5960;5961;5962	5960					0.05278931668067344
DVISNIETF	9	Unmodified	_DVISNIETF_					0	0	0		ENSG00000125398|ENST00000245479|SOX9	ENSG00000125398|ENST00000245479|SOX9	ENSG00000125398|ENST00000245479|SOX9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	519.2609252929688	2	519.261122	1036.50769	-0.85645	-0.00044472	0.58191	0.00030216	-0.27453	-0.00014256	519.2613776428908	86.614	2.5537	86.614	85.826	88.38	0					157	58	5	0	0	0	4.3053E-138	5	8258	8233;8246;8258;8270;8282		258.1	100.89	1	5384700			5352	3387	3679	3683	5963;5964;5965;5966;5967	5965					-0.00910259893203147
DVISSIRNF	9	Unmodified	_DVISSIRNF_					0	0	0		ENSG00000175768|ENST00000321301|TOMM5;nc|ENSG00000175768|Q8N4H5-3|TOMM5;nc|ENSG00000175768|Q8N4H5-2|TOMM5	ENSG00000175768|ENST00000321301|TOMM5	ENSG00000175768|ENST00000321301|TOMM5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	525.7822265625	2	525.782556	1049.55056	-1.0446	-0.00054924	1.1188	0.00058822	0.074135	3.8979E-05	525.7830438319411	71.34	0.76671	71.34	71.091	71.858	0					75	31	4	0	0	0	0.034797	6	6353	6346;6353;6361;6371;6379;6388		115.49	49.065	1	697060			5353	7033	3680	3684	5968;5969;5970;5971;5972;5973	5969					0.027765549549030766
DVITLLIPE	9	Unmodified	_DVITLLIPE_					0	0	0		ENSG00000006453|ENST00000005260|BAIAP2L1	ENSG00000006453|ENST00000005260|BAIAP2L1	ENSG00000006453|ENST00000005260|BAIAP2L1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.3099365234375	2	506.799883	1011.58521	0.069929	3.544E-05	2.6282	0.001332	2.6981	0.0013674	506.8012448436958	50.379	1.4088	50.377	49.492	50.901	-0.0020447					63	39	2	0	0	0	0.20789	1	4166	4166		16.473	4.2663	1	123380			5354	699	3681	3685	5974	5974					0.0798837804301229
DVITLLIPE	9	Unmodified	_DVITLLIPE_					0	0	0		ENSG00000006453|ENST00000005260|BAIAP2L1	ENSG00000006453|ENST00000005260|BAIAP2L1	ENSG00000006453|ENST00000005260|BAIAP2L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.7989501953125	2	506.799883	1011.58521	-1.1816	-0.00059884	2.7931	0.0014155	1.6114	0.00081668	506.8012726682809	44.534	3.0875	44.53	42.489	45.577	-0.0041618					139	73	2	0	0	0	0.78983	1	3611	3611		27.882	2.4321	1	459990			5355	699	3681	3685	5975	5975					0.0798837804301229
DVITLLIPE	9	Unmodified	_DVITLLIPE_					0	0	0		ENSG00000006453|ENST00000005260|BAIAP2L1	ENSG00000006453|ENST00000005260|BAIAP2L1	ENSG00000006453|ENST00000005260|BAIAP2L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.7997741699219	2	506.799883	1011.58521	-0.49009	-0.00024838	3.66	0.0018549	3.1699	0.0016065	506.80171853826346	50.706	1.8822	50.736	49.561	51.443	0.029629					72	54	2	0	0	0	0.76255	1	4072	4072		35.618	6.4687	1	171430			5356	699	3681	3685	5976	5976					0.0798837804301229
DVIVGKIY	8	Unmodified	_DVIVGKIY_					0	0	0		nc|ENSG00000122958|O75436-2|VPS26A;ENSG00000122958|ENST00000263559|VPS26A;ENST00000527586.1_1_11:134109936-134113358:+|nuORF;ENSG00000151502|ENST00000281187|VPS26B	nc|ENSG00000122958|O75436-2|VPS26A;ENST00000527586.1_1_11:134109936-134113358:+|nuORF	nc|ENSG00000122958|O75436-2|VPS26A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.76611328125	2	453.768386	905.522219	-1.8618	-0.00084484	-4.196	-0.001904	-6.0578	-0.0027489	453.76637939924865	41.209	0.88986	41.209	40.877	41.766	0					61	26	3	0	0	0	0.88915	1	2799	2799		35.201	1.6851	1	304750			5357	3254;5123	3682	3686	5977	5977					0.0656785704561571
DVIVKCPISRN	11	Unmodified	_DVIVKCPISRN_					0	0	0			REV__ENSG00000141431|ENST00000269197|ASXL3	REV__ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3455810546875	2	622.344997	1242.67544	0.74038	0.00046077	1.6288	0.0010137	2.3692	0.0014745	622.3461915832663	95.989	2.2851	96.036	95.209	97.494	0.046989					118	53	3	0	0	0	0.7144	1	10154	10154		29.17	0	1	363580	+		5358	19683	3683	3687	5978	5978					0.06381104099773438
DVKAAVRRLLR	11	Unmodified	_DVKAAVRRLLR_					0	0	0		ENSG00000278889|ENST00000341959|OR2S2	ENSG00000278889|ENST00000341959|OR2S2	ENSG00000278889|ENST00000341959|OR2S2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.59771728515625	3	432.945606	1295.81499	-0.96202	-0.0004165	-1.9233	-0.0008327	-2.8854	-0.0012492	433.2788181491382	107.39	0.36929	107.39	107.28	107.65	0					15	8	3	0	0	0	0.17382	1	11185	11185		25.068	15.422	1	64627			5359	9038	3684	3688	5979	5979					0.17891229499309702
DVKDYIQEY	9	Unmodified	_DVKDYIQEY_					0	0	0		ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.7765502929688	2	586.777136	1171.53972	-0.84338	-0.00049488	1.181	0.00069298	0.33762	0.00019811	586.7775427285374	63.148	0.50481	63.148	62.926	63.431	0					47	21	3	0	0	0	0.44529	3	5540	5526;5533;5540		54.722	5.5634	1	128630			5360	6887	3685	3689	5980;5981;5982	5982					-0.03918892210049307
DVKELKVAM	9	Unmodified	_DVKELKVAM_					0	0	0		ENSG00000147400|ENST00000370277|CETN2	ENSG00000147400|ENST00000370277|CETN2	ENSG00000147400|ENST00000370277|CETN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7930297851562	2	516.791535	1031.56852	1.2879	0.00066555	2.2072	0.0011406	3.495	0.0018062	516.7925520505679	86.358	2.7525	86.284	84.67	87.423	-0.073761					114	63	3	0	0	0	0.55097	1	8875	8875		49.442	0	1	275120			5361	4898	3686	3690	5983	5983					0.05399553885399655
DVKELKVAM	9	Unmodified	_DVKELKVAM_					0	0	0		ENSG00000147400|ENST00000370277|CETN2	ENSG00000147400|ENST00000370277|CETN2	ENSG00000147400|ENST00000370277|CETN2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	516.791535	1031.56852	0.46845	0.00024209	2.8303	0.0014627	3.2988	0.0017048	516.7929399624511	86.064	1.9379	86.507	85.784	87.721	0.44331	0.11429	-0.00060409	NaN	49.442	97	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	266430			5362	4898	3686	3690							0.05399553885399655
DVKELKVAM	9	Unmodified	_DVKELKVAM_					0	0	0		ENSG00000147400|ENST00000370277|CETN2	ENSG00000147400|ENST00000370277|CETN2	ENSG00000147400|ENST00000370277|CETN2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	516.791535	1031.56852	-0.59712	-0.00030858	3.8764	0.0020033	3.2793	0.0016947	516.7934516818608	86.129	2.0929	86.577	85.703	87.796	0.44736	0.18354	0.00047717	NaN	49.442	118	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	294650			5363	4898	3686	3690							0.05399553885399655
DVKGKRVV	8	Unmodified	_DVKGKRVV_					0	0	0		ENSG00000102144|ENST00000373316|PGK1	ENSG00000102144|ENST00000373316|PGK1	ENSG00000102144|ENST00000373316|PGK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.7864990234375	2	450.784902	899.55525	1.332	0.00060045	2.5851	0.0011653	3.9171	0.0017658	450.7859133744062	110.66	0.74295	110.71	110.49	111.24	0.054062					31	25	2	0	0	0	0.884	1	13378	13378		33.516	8.9964	1	99517			5364	1992	3687	3691	5984	5984					0.10145483888322815
DVKPLMKL	8	Unmodified	_DVKPLMKL_					0	0	0			REV__ENST00000367876.8_1_1:166822250-166822319:+|nuORF	REV__ENST00000367876.8_1_1:166822250-166822319:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2880554199219	2	472.285889	942.557224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.78	1	119.76	119.26	120.26	-0.024033								0	0	0	0.29631	1	13267	13267		25.45	0	1		+		5365	25581	3688	3692	5985	5985					0.08364776581913702
DVLAGMSGKAI	11	Oxidation (M)	_DVLAGM(Oxidation (M))SGKAI_		DVLAGM(1)SGKAI		DVLAGM(67)SGKAI	0	0	1		nc|ENSG00000077097|Q02880-2|TOP2B;ENSG00000077097|ENST00000264331|TOP2B	nc|ENSG00000077097|Q02880-2|TOP2B	nc|ENSG00000077097|Q02880-2|TOP2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.2821655273438	2	539.284074	1076.5536	-0.025946	-1.3992E-05	-4.4339	-0.0023911	-4.4598	-0.0024051	539.2814842127906	41.019	0.63779	41.023	40.753	41.391	0.0043983					55	23	3	0	0	0	0.32928	1	2637	2637		67.494	8.7117	1	583750			5366	1372	3689	3693	5986	5986		25			0.01838062017395714
DVLALAKIEIK	11	Unmodified	_DVLALAKIEIK_					0	0	0		ENSG00000169021|ENST00000304863|UQCRFS1;nc|ENSG00000226085|P0C7P4|UQCRFS1P1	ENSG00000169021|ENST00000304863|UQCRFS1	ENSG00000169021|ENST00000304863|UQCRFS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.9228210449219	3	404.923585	1211.74892	-0.36148	-0.00014637	-1.2453	-0.00050425	-1.6068	-0.00065062	404.9229767423174	26.33	2.0851	26.291	25.89	27.975	-0.038523					105	48	5	0	0	0	0.69071	1	1183	1183		33.039	6.2897	1	394560			5367	6459	3690	3694	5987	5987					0.15151975813864738
DVLCLVHHHR	10	Unmodified	_DVLCLVHHHR_					0	0	0		nc|ENSG00000198885|Q6GPH6-3|ITPRIPL1;ENSG00000198885|ENST00000439118|ITPRIPL1;nc|ENSG00000198885|Q6GPH6-2|ITPRIPL1	nc|ENSG00000198885|Q6GPH6-3|ITPRIPL1	nc|ENSG00000198885|Q6GPH6-3|ITPRIPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	410.21807861328125	3	410.217108	1227.62949	2.9493	0.0012098	0.54634	0.00022412	3.4956	0.001434	410.217291685665	16.833	0.30132	16.751	16.62	16.921	-0.0821					25	12	3	0	0	0	0.66675	1	175	175		46.457	7.7427	1	143500			5368	8357	3691	3695	5988	5988					0.024785037081755945
DVLGGTRFC	9	Unmodified	_DVLGGTRFC_					0	0	0		ENSG00000196227|ENST00000360816|FAM217B	ENSG00000196227|ENST00000360816|FAM217B	ENSG00000196227|ENST00000360816|FAM217B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2363586425781	2	484.236927	966.459301	-0.53754	-0.00026029	-2.2523	-0.0010907	-2.7899	-0.001351	484.2362894528465	84.849	1.2824	85.296	84.912	86.194	0.44736					130	31	5	0	0	0	0.36616	1	9976	9976		60.118	2.307	1	48085000			5369	8028	3692	3696	5989	5989					-0.02527032014074848
DVLLLFTH	8	Unmodified	_DVLLLFTH_					0	0	0		ENST00000266069.4_1_20:61577212-61577404:+|nuORF	ENST00000266069.4_1_20:61577212-61577404:+|nuORF	ENST00000266069.4_1_20:61577212-61577404:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2721862792969	2	479.273835	956.533118	1.8674	0.00089498	-4.1761	-0.0020015	-2.3087	-0.0011065	479.2716678975305	101.7	1.185	102.03	101.74	102.92	0.32511					59	27	4	0	0	0	0.91005	1	12372	12372		42.474	1.2661	1	2945200			5370	9518	3693	3697	5990	5990					0.05311259419897851
DVLLQIVHFLL	11	Unmodified	_DVLLQIVHFLL_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2679138183594	3	437.267463	1308.78056	-0.040503	-1.7711E-05	0.93992	0.000411	0.89941	0.00039328	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.71207	1	4342	4342		29.551	5.2748	1	2735300			5371	2693	3694	3698	5991	5991					0.1385196856786024
DVLLQIVHFLL	11	Unmodified	_DVLLQIVHFLL_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677917480469	3	437.267463	1308.78056	-0.071191	-3.113E-05	1.0412	0.0004553	0.97004	0.00042417	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.75906	1	4376	4376		20.03	1.4994	1	3270700			5372	2693	3694	3698	5992	5992					0.1385196856786024
DVLLQIVHFLL	11	Unmodified	_DVLLQIVHFLL_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26800537109375	3	437.267463	1308.78056	-0.73822	-0.0003228	1.6574	0.00072472	0.91917	0.00040192	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.74022	1	4486	4486		24.232	0	1	3639500			5373	2693	3694	3698	5993	5993					0.1385196856786024
DVLLQIVHFLL	11	Unmodified	_DVLLQIVHFLL_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26837158203125	3	437.267463	1308.78056	1.2133	0.00053055	-0.31759	-0.00013887	0.89574	0.00039168	437.2672396896614	50.554	1.7579	50.562	49.504	51.262	0.0077477					187	47	5	0	0	0	0.74022	1	4369	4369		24.232	1.6702	1	3327600			5374	2693	3694	3698	5994	5994					0.1385196856786024
DVLNRNQV	8	Unmodified	_DVLNRNQV_					0	0	0		ENSG00000150457|ENST00000382592|LATS2	ENSG00000150457|ENST00000382592|LATS2	ENSG00000150457|ENST00000382592|LATS2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.8051452636719	2	479.259248	956.503943	0.22931	0.0001099	3.884	0.0018615	4.1133	0.0019714	479.25994523956194	39.447	0.17451	39.535	39.396	39.57	0.088375					5	4	2	0	0	0	0.4196	1	2406	2406		23.042	3.6825	1	31911			5375	5066	3695	3699	5995	5995					0.023951151236246915
DVLPQKEEINQ	11	Unmodified	_DVLPQKEEINQ_					0	0	0		ENSG00000240563|ENST00000498273|L1TD1;chr1:62196528-62207512|15|26.2|0.01|10.86|+|2|TE_info:L1MEd,L1MEd_dup400,L1,LINE,acceptor,+,62207512,62207716|L1TD1,None|1	ENSG00000240563|ENST00000498273|L1TD1	ENSG00000240563|ENST00000498273|L1TD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2294921875	3	438.229625	1311.66705	-0.96395	-0.00042243	2.0157	0.00088335	1.0518	0.00046092	438.23045548456986	28.263	0.78527	28.166	27.84	28.626	-0.096945					42	18	3	0	0	0	0.6593	1	1716	1716		37.6	4.5605	1	591240			5376	8780	3696	3700	5996	5996					0.02367828664159788
DVLQHSPLL	9	Unmodified	_DVLQHSPLL_					0	0	0		ENST00000513973.5_1_6:83878483-83878678:-|nuORF	ENST00000513973.5_1_6:83878483-83878678:-|nuORF	ENST00000513973.5_1_6:83878483-83878678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.286376953125	2	511.287474	1020.5604	-1.2853	-0.00065715	-0.086664	-4.431E-05	-1.3719	-0.00070146	511.2874104215347	41.926	2.0437	41.929	41.503	43.546	0.0034142					109	48	4	0	0	0	0.51307	1	3182	3182		51.335	1.3109	1	7262400			5377	13063	3697	3701	5997	5997					0.050937429602981865
DVLSLVPTD	9	Unmodified	_DVLSLVPTD_					0	0	0		nc|ENSG00000144191|Q16281-2|CNGA3;ENSG00000144191|ENST00000272602|CNGA3;nc|ENSG00000144191|Q16281-3|CNGA3	nc|ENSG00000144191|Q16281-2|CNGA3	nc|ENSG00000144191|Q16281-2|CNGA3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2777099609375	2	479.758215	957.501877	-0.74212	-0.00035604	-1.2856	-0.00061676	-2.0277	-0.0009728	479.75749848169886	85.769	3.4513	85.827	84.238	87.69	0.057899					121	79	2	0	0	0	0.20789	1	8754	8754		34.173	4.331	1	171560			5378	4696	3698	3702	5998	5998					0.021426415951623312
DVLWKALL	8	Unmodified	_DVLWKALL_					0	0	0			REV__ENSG00000170456|ENST00000389082|DENND5B	REV__ENSG00000170456|ENST00000389082|DENND5B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774353027344	2	479.292028	956.569503	-1.5292	-0.00073294	-2.7693	-0.0013273	-4.2985	-0.0020603	479.2905837752679	83.627	0.3048	83.765	83.613	83.918	0.13811					9	6	2	0	0	0	0.4196	1	8073	8073		12.959	0	1	39329	+		5379	21662	3699	3703	5999	5999					0.08948136316621458
DVNGIRHL	8	Unmodified	_DVNGIRHL_					0	0	0		ENSG00000100985|ENST00000372330|MMP9	ENSG00000100985|ENST00000372330|MMP9	ENSG00000100985|ENST00000372330|MMP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	462.2561950683594	2	462.256508	922.498464	-0.59625	-0.00027562	-1.4207	-0.00065672	-2.0169	-0.00093234	462.25575938650974	55.206	0.92735	55.233	54.758	55.685	0.027138					40	23	2	0	0	0	0.89043	1	4971	4971		35.618	0.41757	1	300650			5380	1889	3700	3704	6000	6000					0.03411436331805362
DVNGIRHL	8	Unmodified	_DVNGIRHL_					0	0	0		ENSG00000100985|ENST00000372330|MMP9	ENSG00000100985|ENST00000372330|MMP9	ENSG00000100985|ENST00000372330|MMP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	462.25494384765625	2	462.256508	922.498464	0.31476	0.0001455	-1.9686	-0.00091001	-1.6539	-0.00076451	462.2554437313544	50.747	0.65531	50.797	50.487	51.142	0.049896					38	22	2	0	0	0	0.92457	1	4000	4000		47.916	5.5195	1	260120			5381	1889	3700	3704	6001	6001					0.03411436331805362
DVNRLLIRIK	10	Unmodified	_DVNRLLIRIK_					0	0	0			REV__nc|ENSG00000073146|Q9BXT6-4|MOV10L1	REV__nc|ENSG00000073146|Q9BXT6-4|MOV10L1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.9322814941406	3	413.934706	1238.78229	-1.8356	-0.0007598	-3.1712	-0.0013127	-5.0068	-0.0020725	413.93335322974514	43.048	2.0933	43.048	42.061	44.154	0					130	51	3	0	0	0	0.86446	1	3101	3101		30.569	10.538	1	494810	+		5382	16667	3701	3705	6002	6002					0.1724502237645993
DVPCSNANK	9	Unmodified	_DVPCSNANK_					0	0	0			REV__nc|ENSG00000070047|Q9P1Y6-2|PHRF1	REV__nc|ENSG00000070047|Q9P1Y6-2|PHRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.21807861328125	2	474.216192	946.41783	0.78918	0.00037424	1.7244	0.00081776	2.5136	0.001192	474.21668296694435	23.753	0.77575	23.372	23.018	23.794	-0.38178					42	17	4	0	0	0	0.77244	1	1071	1071		32.812	1.2826	1	342520	+		5383	16594	3702	3706	6003	6003					-0.05752212773415977
DVPNTVILLKC	11	Unmodified	_DVPNTVILLKC_					0	0	0			REV__ENSG00000166800|ENST00000280706|LDHAL6A	REV__ENSG00000166800|ENST00000280706|LDHAL6A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.89898681640625	3	405.565291	1213.67404	0.39528	0.00016031	-1.6799	-0.0006813	-1.2846	-0.00052099	405.56450530615757	63.272	1.3532	63.394	62.754	64.107	0.12253					138	58	3	0	0	0	0.60687	1	5504	5504		43.651	2.5707	1	242080	+		5384	21320	3703	3707	6004	6004					0.0757547001101102
DVPQRRVA	8	Unmodified	_DVPQRRVA_					0	0	0			REV__ENST00000155926.8_1_2:12857892-12858144:+|nuORF	REV__ENST00000155926.8_1_2:12857892-12858144:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7687072753906	2	470.769783	939.525013	-0.51152	-0.00024081	-1.2938	-0.0006091	-1.8054	-0.00084991	470.7691408060053	64.72	1.3934	65.274	64.343	65.736	0.55386					50	33	2	0	0	0	0.9283	1	7019	7019		49.442	7.0454	1	110280	+		5385	24075	3704	3708	6005	6005					0.052831252231385406
DVQVCEGVC	9	Unmodified	_DVQVCEGVC_					0	0	0			REV__ENST00000574370.1_1_17:1957884-1957992:+|nuORF	REV__ENST00000574370.1_1_17:1957884-1957992:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.2001953125	2	476.199153	950.383753	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.89	1	31.949	31.449	32.449	0.058315								0	0	0	0.28772	1	1475	1475		35.618	7.364	1		+		5386	28972	3705	3709	6006	6006					-0.09342377256666623
DVQVFLFLLFL	11	Unmodified	_DVQVFLFLLFL_					0	0	0		ENSG00000181698|ENST00000641665|OR5T1	ENSG00000181698|ENST00000641665|OR5T1	ENSG00000181698|ENST00000641665|OR5T1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.93243408203125	3	451.93208	1352.77441	-1.2127	-0.00054806	2.4872	0.001124	1.2745	0.00057598	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.76579	1	10369	10369		18.531	1.8137	1	518100			5387	7399	3706	3710	6007	6007					0.1121345033632224
DVRCMYTL	8	Unmodified	_DVRCMYTL_					0	0	0			REV__nc|ENSG00000164741|Q96QB1-6|DLC1	REV__nc|ENSG00000164741|Q96QB1-6|DLC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.73284912109375	2	500.733163	999.451773	0.33553	0.00016801	-1.3361	-0.00066903	-1.0006	-0.00050102	500.7323481055169	30.848	0.7394	30.852	30.491	31.23	0.0037212					40	16	3	0	0	0	0.91472	1	2079	2079		44.117	0	1	820900	+		5388	29993	3707	3711	6008	6008					-0.047975076060083666
DVRKDHVKF	9	Unmodified	_DVRKDHVKF_					0	0	0		nc|ENSG00000146828|Q9BXP2-2|SLC12A9;nc|ENSG00000146828|Q9BXP2-3|SLC12A9;nc|ENSG00000146828|Q9BXP2-4|SLC12A9;ENSG00000146828|ENST00000354161|SLC12A9	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.7705078125	2	572.317097	1142.61964	-1.2054	-0.00068985	-0.92166	-0.00052748	-2.127	-0.0012173	572.3165772691276	58.547	0.41392	58.94	58.693	59.107	0.39209					13	9	2	0	0	0	0.20789	1	6111	6111		14.865	0	1	132590			5389	4860	3708	3712	6009	6009					0.0540363897446241
DVRKRSKRPR	10	Unmodified	_DVRKRSKRPR_					0	0	0			REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	649.4005737304688	2	649.399818	1296.78508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.51	1	83.51	83.01	84.01	0								0	0	0	0.45132	1	7835	7835		29.17	2.4771	1		+		5390	21050	3709	3713	6010	6010					0.14856290553962026
DVRPGKKN	8	Unmodified	_DVRPGKKN_					0	0	0			REV__nc|ENSG00000114062|Q05086-2|UBE3A	REV__nc|ENSG00000114062|Q05086-2|UBE3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26409912109375	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.86677	2	8075	8075;8183		35.618	5.1146	1	4511100	+		5391	18028	3710	3714	6011;6012	6011					0.05435722848858404
DVRPGKKN	8	Unmodified	_DVRPGKKN_					0	0	0			REV__nc|ENSG00000114062|Q05086-2|UBE3A	REV__nc|ENSG00000114062|Q05086-2|UBE3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2640380859375	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.89043	1	8294	8294		35.618	1.4457	1	4885100	+		5392	18028	3710	3714	6013	6013					0.05435722848858404
DVRPGKKN	8	Unmodified	_DVRPGKKN_					0	0	0			REV__nc|ENSG00000114062|Q05086-2|UBE3A	REV__nc|ENSG00000114062|Q05086-2|UBE3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2624816894531	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.87922	1	7747	7747		31.955	0.42505	1	1458600	+		5393	18028	3710	3714	6014	6014					0.05435722848858404
DVRPGKKN	8	Unmodified	_DVRPGKKN_					0	0	0			REV__nc|ENSG00000114062|Q05086-2|UBE3A	REV__nc|ENSG00000114062|Q05086-2|UBE3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26397705078125	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.87479	1	7908	7908		30.504	1.3541	1	4732500	+		5394	18028	3710	3714	6015	6015					0.05435722848858404
DVRPGKKN	8	Unmodified	_DVRPGKKN_					0	0	0			REV__nc|ENSG00000114062|Q05086-2|UBE3A	REV__nc|ENSG00000114062|Q05086-2|UBE3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.263427734375	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.87479	1	7447	7447		30.504	1.3541	1	1032000	+		5395	18028	3710	3714	6016	6016					0.05435722848858404
DVRPGKKN	8	Unmodified	_DVRPGKKN_					0	0	0			REV__nc|ENSG00000114062|Q05086-2|UBE3A	REV__nc|ENSG00000114062|Q05086-2|UBE3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2637939453125	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.89043	1	8013	8013		35.618	0	1	4061400	+		5396	18028	3710	3714	6017	6017					0.05435722848858404
DVRPINRA	8	Unmodified	_DVRPINRA_					0	0	0			REV__ENST00000558163.1_1_15:45661708-45670712:-|nuORF	REV__ENST00000558163.1_1_15:45661708-45670712:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7689514160156	2	470.769783	939.525013	-0.38204	-0.00017986	-1.0263	-0.00048316	-1.4084	-0.00066301	470.769153299195	81.635	1.0784	82.062	81.671	82.749	0.42646					51	26	2	0	0	0	0.91977	1	9407	9407		45.952	0	1	1307200	+		5397	28730	3711	3715	6018	6018					0.05283125223127172
DVRPRLAS	8	Unmodified	_DVRPRLAS_					0	0	0		ENSG00000163645|ENST00000295910|ERICH6;nc|ENSG00000163645|Q7L0X2-2|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2635803222656	2	457.264333	912.514114	-1.2803	-0.00058543	1.4305	0.00065413	0.15023	6.8693E-05	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.89043	1	7384	7384		35.618	3.6634	1	812040			5398	5847	3712	3716	6019	6019					0.05435722848858404
DVRPRLAS	8	Unmodified	_DVRPRLAS_					0	0	0		ENSG00000163645|ENST00000295910|ERICH6;nc|ENSG00000163645|Q7L0X2-2|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2638854980469	2	457.264333	912.514114	-0.13162	-6.0186E-05	0.19173	8.7669E-05	0.060104	2.7483E-05	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.89043	1	7798	7798		35.618	2.1027	1	1194000			5399	5847	3712	3716	6020	6020					0.05435722848858404
DVRPRLAS	8	Unmodified	_DVRPRLAS_					0	0	0		ENSG00000163645|ENST00000295910|ERICH6;nc|ENSG00000163645|Q7L0X2-2|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2630310058594	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.90983	1	8178	8178		42.396	1.618	1	4885100			5400	5847	3712	3716	6021	6021					0.05435722848858404
DVRPRLAS	8	Unmodified	_DVRPRLAS_					0	0	0		ENSG00000163645|ENST00000295910|ERICH6;nc|ENSG00000163645|Q7L0X2-2|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2640380859375	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.89494	1	7897	7897		37.159	0	1	4732500			5401	5847	3712	3716	6022	6022					0.05435722848858404
DVRPRLAS	8	Unmodified	_DVRPRLAS_					0	0	0		ENSG00000163645|ENST00000295910|ERICH6;nc|ENSG00000163645|Q7L0X2-2|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26409912109375	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.89494	1	7865	7865		37.159	0	1	4061400			5402	5847	3712	3716	6023	6023					0.05435722848858404
DVRPRLAS	8	Unmodified	_DVRPRLAS_					0	0	0		ENSG00000163645|ENST00000295910|ERICH6;nc|ENSG00000163645|Q7L0X2-2|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.263427734375	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.87064	1	9373	9373		29.15	1.2673	1	3505500			5403	5847	3712	3716	6024	6024					0.05435722848858404
DVRPRLAS	8	Unmodified	_DVRPRLAS_					0	0	0		ENSG00000163645|ENST00000295910|ERICH6;nc|ENSG00000163645|Q7L0X2-2|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2640380859375	2	457.264333	912.514114	-0.11988	-5.4815E-05	0.13028	5.9574E-05	0.010409	4.7595E-06	457.26428644836	79.385	2.7838	79.935	78.442	81.226	0.54945					170	65	4	0	0	0	0.9283	1	9089	9089		49.442	8.6634	1	1064700			5404	5847	3712	3716	6025	6025					0.05435722848858404
DVRPRLAS	8	Unmodified	_DVRPRLAS_					0	0	0		ENSG00000163645|ENST00000295910|ERICH6;nc|ENSG00000163645|Q7L0X2-2|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2640686035156	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.90523	1	9664	9664		40.778	0	1	4402400			5405	5847	3712	3716	6026	6026					0.05435722848858404
DVRSVLSLFH	10	Unmodified	_DVRSVLSLFH_					0	0	0			REV__ENSG00000204740|ENST00000454679|MALRD1	REV__ENSG00000204740|ENST00000454679|MALRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	586.824462890625	2	586.824755	1171.63496	-1.3322	-0.00078178	-0.15529	-9.1126E-05	-1.4875	-0.0008729	586.8245139842418	110.15	1.3506	110.15	109.98	111.33	0.0060501					111	48	4	0	0	0	0.8608	1	11757	11757		34.173	5.0025	1	5492600	+		5406	23519	3713	3717	6027	6027					0.056005057716674855
DVRVNKLLQH	10	Unmodified	_DVRVNKLLQH_					0	0	0		ENST00000547496.5_1_12:89853476-89885774:-|nuORF;ENST00000539190.6_1_12:89855074-89919672:-|nuORF;nc|ENSG00000139323|Q8TC44-2|POC1B;ENSG00000139323|ENST00000313546|POC1B	ENST00000547496.5_1_12:89853476-89885774:-|nuORF	ENST00000547496.5_1_12:89853476-89885774:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3541870117188	2	611.356754	1220.69895	-1.2523	-0.00076561	-0.012793	-7.8212E-06	-1.2651	-0.00077343	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.82886	1	9473	9473		37.812	1.3648	1	5978100			5407	4361	3714	3718	6028	6028					0.09743285928607293
DVRVSSRGKY	10	Unmodified	_DVRVSSRGKY_					0	0	0		ENST00000552259.5_1_12:39040880-39073423:-|nuORF;ENST00000546603.5_1_12:39047686-39073432:-|nuORF;nc|ENSG00000139117|Q86YQ8-2|CPNE8;ENSG00000139117|ENST00000331366|CPNE8	ENST00000552259.5_1_12:39040880-39073423:-|nuORF	ENST00000552259.5_1_12:39040880-39073423:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.818115234375	2	583.817461	1165.62037	-0.42379	-0.00024742	-3.0954	-0.0018071	-3.5192	-0.0020545	583.8154776101471	75.95	0.92014	76.519	76.142	77.062	0.56836					41	22	3	0	0	0	0.49268	1	8651	8651		56.434	8.7765	1	501850			5408	4345	3715	3719	6029	6029					0.04418433623527562
DVSGWQTFLQ	10	Unmodified	_DVSGWQTFLQ_					0	0	0		nc|ENSG00000197818|Q9Y2E8-2|SLC9A8;ENSG00000197818|ENST00000361573|SLC9A8	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8093872070312	2	590.785296	1179.55604	-1.4607	-0.00086295	3.4067	0.0020126	1.9461	0.0011497	591.2869121122291	57.766	0.19294	58.161	58.043	58.236	0.39407					6	4	2	0	0	0	0.37624	1	6025	6025		75.043	3.1658	1	157170			5409	8202	3716	3720	6030	6030					-0.026557662532923132
DVSIGTLALGF	11	Unmodified	_DVSIGTLALGF_					0	0	0			REV__ENST00000264951.8_1_3:142151730-142166889:-|nuORF	REV__ENST00000264951.8_1_3:142151730-142166889:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2626342773438	2	546.800414	1091.58628	-0.13238	-7.2386E-05	2.4554	0.0013426	2.323	0.0012702	546.802048093103	62.461	0.51896	63.015	62.733	63.252	0.55449					20	11	2	0	0	0	0.17318	1	6736	6736		25.574	6.4705	1	105070	+		5410	24484	3717	3721	6031	6031					0.04414592411899321
DVSLPEAR	8	Unmodified	_DVSLPEAR_					0	0	0		ENST00000513237.5_1_4:106164928-106190806:+|nuORF	ENST00000513237.5_1_4:106164928-106190806:+|nuORF	ENST00000513237.5_1_4:106164928-106190806:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7745056152344	2	443.735074	885.455596	0.13564	6.019E-05	1.6936	0.00075151	1.8293	0.0008117	443.735785897685	21.351	0.39273	20.723	20.494	20.887	-0.62834					13	9	3	0	0	0	0.4196	1	781	781		11.511	0	1	30883			5411	13049	3718	3722	6032	6032					0.008286214837198713
DVSMHINH	8	Oxidation (M)	_DVSM(Oxidation (M))HINH_		DVSM(1)HINH		DVSM(52)HINH	0	0	1		ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71875	2	484.716359	967.418164	1.8339	0.00088894	1.6352	0.00079259	3.4691	0.0016815	484.717227769282	100.08	1.4855	100.42	100.11	101.59	0.3459					119	38	5	0	0	0	0.93529	1	12176	12176		52.299	6.3472	1	10268000			5412	7452	3719	3723	6033	6033					-0.06684793053545945
DVSTSLSTPF	10	Unmodified	_DVSTSLSTPF_					0	0	0			REV__ENSG00000180440|ENST00000315190|SERTM1	REV__ENSG00000180440|ENST00000315190|SERTM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2716674804688	2	527.258579	1052.50261	0.32025	0.00016885	-0.99093	-0.00052248	-0.67068	-0.00035362	527.2581301813458	55.142	0.62776	55.711	55.447	56.074	0.56836					21	14	2	0	0	0	0.37624	1	5713	5713		40.778	15.328	1	164740	+		5413	22399	3720	3724	6034	6034					-0.02154563755811978
DVSVMGET	8	Unmodified	_DVSVMGET_					0	0	0			REV__nc|ENSG00000085563|P08183-2|ABCB1	REV__nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.18505859375	2	419.186568	836.358584	0.12889	5.403E-05	1.4685	0.00061556	1.5974	0.00066959	419.1869718908068	31.332	0.42109	31.315	31.042	31.463	-0.017464					33	20	2	0	0	0	0.90465	1	1424	1424		40.573	1.7665	1	82542	+		5414	16894	3721	3725	6035	6035					-0.06614108787584883
DVTDVLLLD	9	Unmodified	_DVTDVLLLD_					0	0	0		ENST00000507097.5_1_5:137893182-137909502:-|nuORF;ENSG00000113013|ENST00000297185|HSPA9;ENST00000508003.1_1_5:137895468-137897466:-|nuORF;ENST00000432228.1_1_2:222827655-222828180:+|nuORF	ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENST00000507097.5_1_5:137893182-137909502:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29052734375	2	501.771322	1001.52809	-0.14097	-7.0733E-05	2.266	0.001137	2.125	0.0010663	502.27591090087014	85.832	0.70399	86.279	85.782	86.486	0.44736					24	16	2	0	0	0	0.20789	1	10036	10036		21.96	9.753	1	112020			5415	2694	3722	3726	6036	6036					0.027389107666408563
DVTFMLFEHA	10	Unmodified	_DVTFMLFEHA_					0	0	0			REV__ENSG00000250913|ENST00000506619|USP17L23	REV__ENSG00000250913|ENST00000506619|USP17L23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.28564453125	2	605.284074	1208.5536	0.52217	0.00031606	2.8738	0.0017395	3.396	0.0020555	605.2854781639707	58.165	1.929	58.276	57.865	59.794	0.11027					166	76	4	0	0	0	0.66675	1	4933	4933		34.173	0	1	1588900	+		5416	23726	3723	3727	6037	6037					-0.042339379825989454
DVTLKVAGRIH	11	Unmodified	_DVTLKVAGRIH_					0	0	0		ENST00000451871.1_1_13:42499863-42500601:+|nuORF	ENST00000451871.1_1_13:42499863-42500601:+|nuORF	ENST00000451871.1_1_13:42499863-42500601:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.57415771484375	3	403.575178	1207.70371	-1.8285	-0.00073793	1.0097	0.0004075	-0.81877	-0.00033043	403.5754909660959	80.353	1.0354	80.49	79.889	80.924	0.13702					64	31	3	0	0	0	0.74771	1	7683	7683		22.562	1.5294	1	264210			5417	11907	3724	3728	6038	6038					0.10816170071370834
DVTLKVAGRIH	11	Unmodified	_DVTLKVAGRIH_					0	0	0		ENST00000451871.1_1_13:42499863-42500601:+|nuORF	ENST00000451871.1_1_13:42499863-42500601:+|nuORF	ENST00000451871.1_1_13:42499863-42500601:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5749816894531	3	403.575178	1207.70371	-0.21515	-8.6831E-05	-0.71244	-0.00028752	-0.9276	-0.00037436	403.57486213587435	79.28	1.3173	79.83	78.938	80.256	0.54945					66	30	3	0	0	0	0.67762	1	9084	9084		35.178	1.2566	1	2125200			5418	11907	3724	3728	6039	6039					0.10816170071370834
DVTLKVAGRIH	11	Unmodified	_DVTLKVAGRIH_					0	0	0		ENST00000451871.1_1_13:42499863-42500601:+|nuORF	ENST00000451871.1_1_13:42499863-42500601:+|nuORF	ENST00000451871.1_1_13:42499863-42500601:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747985839844	3	403.575178	1207.70371	-0.18431	-7.4383E-05	-0.84021	-0.00033909	-1.0245	-0.00041347	403.57480385646164	80.099	0.84451	80.626	80.105	80.949	0.52676					63	19	4	0	0	0	0.60687	1	9169	9169		43.651	8.4726	1	4093300			5419	11907	3724	3728	6040	6040					0.10816170071370834
DVTNPLQIMY	10	Unmodified	_DVTNPLQIMY_					0	0	0		nc|ENSG00000104312|O43353-2|RIPK2;ENST00000522965.1_1_8:90770176-90802641:+|nuORF;ENSG00000104312|ENST00000220751|RIPK2	nc|ENSG00000104312|O43353-2|RIPK2	nc|ENSG00000104312|O43353-2|RIPK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.7990112304688	2	597.297181	1192.57981	-0.12766	-7.6253E-05	3.4246	0.0020455	3.2969	0.0019692	597.2990016489515	72.288	0.55567	72.248	72.009	72.565	-0.04039					37	22	2	0	0	0	0.77314	1	7044	7044		40.778	1.5253	1	149060			5420	2123	3725	3729	6041	6041					-0.008776688111083786
DVTSFNKN	8	Unmodified	_DVTSFNKN_					0	0	0			REV__nc|ENSG00000095002|P43246-2|MSH2	REV__nc|ENSG00000095002|P43246-2|MSH2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	462.7234191894531	2	462.724707	923.43486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.657	1	37.633	37.133	38.133	-0.023979								0	0	0	0.29883	1	2497	2497		51.335	5.3632	1		+		5421	17050	3726	3730	6042	6042					-0.02991968895946684
DVVAPLVK	8	Unmodified	_DVVAPLVK_					0	0	0			REV__ENSG00000080200|ENST00000389622|CRYBG3	REV__ENSG00000080200|ENST00000389622|CRYBG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.7640380859375	2	420.763104	839.511654	0.002899	1.2198E-06	3.4637	0.0014574	3.4666	0.0014586	420.7645329836585	38.319	0.77093	38.292	37.86	38.631	-0.027843					24	17	2	0	0	0	0.87479	1	2583	2583		30.504	0	1	42138	+		5422	16797	3727	3731	6043	6043					0.08547874391183541
DVVEWGHE	8	Unmodified	_DVVEWGHE_					0	0	0			REV__nc|ENSG00000049759|Q96PU5-9|NEDD4L	REV__nc|ENSG00000049759|Q96PU5-9|NEDD4L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.718505859375	2	485.716882	969.41921	2.4912	0.00121	-2.4931	-0.0012109	-0.0018388	-8.9313E-07	485.7139821132064	101.79	0.22078	102.12	102.02	102.24	0.32511					6	4	2	0	0	0	0.4196	1	12403	12403		40.573	10.731	1	78250	+		5423	16372	3728	3732	6044	6044					-0.06672255412991035
DVVGRFNERF	10	Unmodified	_DVVGRFNERF_					0	0	0		nc|ENSG00000135372|Q9H0A0-2|NAT10;ENSG00000135372|ENST00000257829|NAT10	nc|ENSG00000135372|Q9H0A0-2|NAT10	nc|ENSG00000135372|Q9H0A0-2|NAT10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3704833984375	2	619.817461	1237.62037	3.1699	0.0019647	-1.773	-0.001099	1.3968	0.00086577	620.3180918526382	101.52	0.32956	101.84	101.74	102.07	0.32511					11	7	2	0	0	0	0.37624	1	12358	12358		41.427	14.734	1	214350			5424	4012	3729	3733	6045	6045					0.011064336234994698
DVVGSWPQKP	10	Unmodified	_DVVGSWPQKP_					0	0	0			REV__nc|ENSG00000087085|P22303-3|ACHE	REV__nc|ENSG00000087085|P22303-3|ACHE	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.3054809570312	2	556.790381	1111.56621	-0.23591	-0.00013135	3.4099	0.0018986	3.174	0.0017672	556.7925800210237	74.499	0.52962	74.891	74.665	75.194	0.3911					16	12	2	0	0	0	0.37624	1	8433	8433		37.812	0	1	98533	+		5425	16921	3730	3734	6046	6046					0.014888414719507637
DVVLRKGSGL	10	Unmodified	_DVVLRKGSGL_					0	0	0			REV__nc|ENSG00000122507|Q3SYG4-5|BBS9	REV__nc|ENSG00000122507|Q3SYG4-5|BBS9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3031005859375	2	522.314023	1042.61349	2.4295	0.001269	1.6417	0.00085748	4.0712	0.0021265	522.3146089202379	100.93	0.64835	101.27	100.82	101.46	0.3459					35	15	3	0	0	0	0.37624	1	12262	12262		13.454	0	1	611820	+		5426	18500	3731	3735	6047	6047					0.09389120742957857
DVVLSPLMLL	10	Unmodified	_DVVLSPLMLL_					0	0	0			REV__nc|ENSG00000231004|P0C854|CECR9	REV__nc|ENSG00000231004|P0C854|CECR9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3257446289062	2	550.325211	1098.63587	0.24684	0.00013584	3.3396	0.0018378	3.5864	0.0019737	550.327086838159	99.973	1.2029	100.19	99.606	100.81	0.21511					73	27	4	0	0	0	0.84112	1	10381	10381		37.159	7.9891	1	361560	+		5427	30219	3732	3736	6048	6048					0.09049584096351282
DVVPIHHKK	9	Unmodified	_DVVPIHHKK_					0	0	0			REV__ENST00000399449.3_1_10:75487125-75488312:-|nuORF;REV__ENSG00000165733|ENST00000374518|BMS1	REV__ENSG00000165733|ENST00000374518|BMS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.8180541992188	2	536.816733	1071.61891	0.47756	0.00025636	2.599	0.0013952	3.0766	0.0016516	536.8179766266068	18.437	0.37381	17.96	17.75	18.124	-0.47694					21	7	4	0	0	0	0.78058	1	396	396		30.504	0	1	164000	+		5428	26226;21213	3733	3737	6049	6049					0.08596844325415987
DVYVPKKVK	9	Unmodified	_DVYVPKKVK_					0	0	0			REV__ENST00000578114.1_1_18:29202843-29202987:-|nuORF	REV__ENST00000578114.1_1_18:29202843-29202987:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8265991210938	2	538.329142	1074.64373	2.9826	0.0016056	-3.0036	-0.0016169	-0.020937	-1.1271E-05	538.3276069416726	103.89	1.8059	104.16	103.67	105.48	0.26524					68	43	3	0	0	0	0.20789	1	12805	12805		13.454	0	1	283380	+		5429	29019	3734	3738	6050	6050					0.10939479408125408
DWDLRGRYF	9	Unmodified	_DWDLRGRYF_					0	0	0			REV__ENST00000416636.2_1_7:23624683-23625604:-|nuORF	REV__ENST00000416636.2_1_7:23624683-23625604:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	614.2987670898438	2	614.298904	1226.58326	-0.37256	-0.00022886	-0.37505	-0.00023039	-0.74761	-0.00045925	614.2984584382294	76.181	0.6899	76.23	75.962	76.652	0.049194					46	20	3	0	0	0	0.58151	1	7372	7372		47.916	3.5384	1	224410	+		5430	22128	3735	3739	6051	6051					-0.02097237922248496
DWQRERWQIWE	11	Unmodified	_DWQRERWQIWE_					0	0	0		ENSG00000047648|ENST00000337414|ARHGAP6;nc|ENSG00000047648|O43182-4|ARHGAP6;ENST00000489330.6_1_X:11156985-11160533:-|nuORF	ENSG00000047648|ENST00000337414|ARHGAP6	ENSG00000047648|ENST00000337414|ARHGAP6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	409.2785339355469	4	408.698295	1630.76407	2.9275	0.0011965	1.5691	0.00064129	4.4967	0.0018378	408.6989284533172	18.105	0.64272	18.026	17.829	18.471	-0.078943					39	25	3	0	0	0	0.18386	1	325	325		5.6988	2.0797	1	38671			5431	967	3736	3740	6052	6052					-0.026077643362214076
DWRQPVFYYRR	11	Unmodified	_DWRQPVFYYRR_					0	0	0		ENSG00000136770|ENST00000376980|DNAJC1;ENST00000376946.2_1_10:22209591-22217997:-|nuORF	ENSG00000136770|ENST00000376980|DNAJC1	ENSG00000136770|ENST00000376980|DNAJC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.2745971679688	3	529.27227	1584.79498	-0.21869	-0.00011575	2.0039	0.0010606	1.7852	0.00094488	529.2732380924513	71.384	1.1038	71.345	70.966	72.069	-0.039009					157	45	5	0	0	0	0.77205	2	6909	6909;6971		17.167	6.5799	1	1427100			5432	4136	3737	3741	6053;6054	6053					0.025974337686875515
DWRQPVFYYRR	11	Unmodified	_DWRQPVFYYRR_					0	0	0		ENSG00000136770|ENST00000376980|DNAJC1;ENST00000376946.2_1_10:22209591-22217997:-|nuORF	ENSG00000136770|ENST00000376980|DNAJC1	ENSG00000136770|ENST00000376980|DNAJC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.2737426757812	3	529.27227	1584.79498	0.087974	4.6562E-05	1.6282	0.00086176	1.7162	0.00090833	529.6074494906942	71.247	0.96676	71.285	70.943	71.91	0.038055					159	46	4	0	0	0	0.79224	1	6806	6806		12.957	4.1582	1	1379900			5433	4136	3737	3741	6055	6055					0.025974337686875515
DYAYCRYWWRR	11	Unmodified	_DYAYCRYWWRR_					0	0	0			REV__nc|ENSG00000104972|Q8NHL6-5|LILRB1	REV__nc|ENSG00000104972|Q8NHL6-5|LILRB1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.7251586914062	3	546.58586	1636.73575	0.91818	0.00050187	-1.8473	-0.0010097	-0.92911	-0.00050784	546.5848329374876	23.779	0.98037	23.736	23.36	24.34	-0.043221					60	30	3	0	0	0	0.18408	1	870	870		3.4087	1.6524	1	41872	+		5434	17495	3738	3742	6056	6056					-0.057147855171706397
DYDFVYGGVSL	11	Unmodified	_DYDFVYGGVSL_					0	0	0			REV__nc|ENSG00000184672|Q86SE5-2|RALYL	REV__nc|ENSG00000184672|Q86SE5-2|RALYL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	617.3359375	2	617.784961	1233.55537	0.21304	0.00013161	-1.8282	-0.0011295	-1.6152	-0.00099784	617.7842192568866	79.657	0.25496	80.073	79.913	80.168	0.41621					7	5	2	0	0	0	0.1728	1	9137	9137		39.253	2.9352	1	61951	+		5435	30096	3739	3743	6057	6057					-0.05206605692978883
DYDPLVVKL	9	Unmodified	_DYDPLVVKL_					0	0	0		ENSG00000131558|ENST00000253861|EXOC4;ENST00000484397.5_1_7:133682345-133692589:+|nuORF	ENSG00000131558|ENST00000253861|EXOC4	ENSG00000131558|ENST00000253861|EXOC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2957763671875	2	531.297507	1060.58046	0.53914	0.00028644	-1.0678	-0.00056733	-0.52868	-0.00028089	531.2967467976473	75.905	0.74339	76.3	75.952	76.695	0.39507					36	17	3	0	0	0	0.11055	5	8584	8573;8584;8595;8607;8622		90.37	31.263	1	769910			5436	3737	3740	3744	6058;6059;6060;6061;6062	6059					0.05259493900234702
DYDPLVVKL	9	Unmodified	_DYDPLVVKL_					0	0	0		ENSG00000131558|ENST00000253861|EXOC4;ENST00000484397.5_1_7:133682345-133692589:+|nuORF	ENSG00000131558|ENST00000253861|EXOC4	ENSG00000131558|ENST00000253861|EXOC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2969360351562	2	531.297507	1060.58046	-0.083808	-4.4527E-05	-0.44856	-0.00023832	-0.53237	-0.00028285	531.2970838847142	75.754	0.7375	76.322	75.988	76.725	0.56836					39	17	3	0	0	0	0.032438	4	8602	8591;8602;8615;8627		116.9	52.696	1	732050			5437	3737	3740	3744	6063;6064;6065;6066	6064					0.05259493900234702
DYFFTWANND	10	Unmodified	_DYFFTWANND_					0	0	0			REV__nc|ENSG00000182022|Q7LFX5-2|CHST15	REV__nc|ENSG00000182022|Q7LFX5-2|CHST15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	646.767333984375	2	646.76456	1291.51457	1.833	0.0011855	0.74838	0.00048402	2.5814	0.0016695	646.7648108796553	22.453	0.6923	21.842	21.516	22.209	-0.6107					35	16	3	0	0	0	0.86106	1	908	908		33.922	11.962	1	376740	+		5438	22493	3741	3745	6067	6067					-0.11952947012605364
DYLEIILH	8	Unmodified	_DYLEIILH_					0	0	0			REV__ENST00000557380.5_1_14:50304918-50319471:-|nuORF	REV__ENST00000557380.5_1_14:50304918-50319471:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.279541015625	2	508.276575	1014.5386	2.9959	0.0015228	3.7231	0.0018924	6.719	0.0034151	508.27837945353787	26.338	1.1095	25.998	25.616	26.725	-0.34035					74	24	5	0	0	0	0.89567	2	1430	1430;1452		57.453	0	1	2006400	+		5439	21192	3742	3746	6068;6069	6068					0.03190938211730554
DYLLLRQGTN	10	Unmodified	_DYLLLRQGTN_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.8212280273438	2	596.81967	1191.62479	0.20612	0.00012302	-0.30937	-0.00018464	-0.10325	-6.162E-05	596.8191288000403	32.966	0.52197	32.912	32.626	33.148	-0.05434					27	12	4	0	0	0	0.86471	1	1972	1972		30.318	1.1477	1	58608	+		5440	20278	3743	3747	6070	6070					0.03663898046443137
DYLVIQIKK	9	Unmodified	_DYLVIQIKK_					0	0	0		nc|ENSG00000111667|P45974-2|USP5;ENSG00000111667|ENST00000229268|USP5;ENST00000537267.5_1_12:6966716-6975238:+|nuORF;ENST00000541969.1_1_12:6969646-6972391:+|nuORF	nc|ENSG00000111667|P45974-2|USP5	nc|ENSG00000111667|P45974-2|USP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.340087890625	2	560.342249	1118.66995	-1.1297	-0.00063301	-2.5217	-0.001413	-3.6514	-0.002046	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.58668	1	11359	11359		47.657	6.8792	1	84412000			5441	2598	3744	3748	6071	6071					0.11535748579603933
DYMSSLLL	8	Unmodified	_DYMSSLLL_					0	0	0			REV__ENST00000429480.2_1_1:6298805-6299333:+|nuORF	REV__ENST00000429480.2_1_1:6298805-6299333:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2348937988281	2	471.236061	940.45757	-0.88882	-0.00041884	-2.4808	-0.0011691	-3.3697	-0.0015879	471.2346931184247	73.215	1.0351	73.603	73.043	74.078	0.38779					53	27	3	0	0	0	0.91005	1	8244	8244		42.474	5.3154	1	1012600	+		5442	26592	3745	3749	6072	6072					-0.015040858226598175
DYPILRHGH	9	Unmodified	_DYPILRHGH_					0	0	0			REV__nc|ENSG816|P62685|ERVK-8_gag	REV__nc|ENSG816|P62685|ERVK-8_gag	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.2879028320312	2	554.28834	1106.56213	-1.3781	-0.00076384	1.3053	0.00072351	-0.072766	-4.0333E-05	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.76255	1	2314	2314		35.618	3.6634	1	328550	+		5443	30311	3746	3750	6073	6073					0.013107967688938515
DYPSMVILY	9	Unmodified	_DYPSMVILY_					0	0	0			REV__ENST00000312756.4_1_3:158369993-158373740:+|nuORF	REV__ENST00000312756.4_1_3:158369993-158373740:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.7720947265625	2	550.770268	1099.52598	-0.19023	-0.00010477	3.2544	0.0017924	3.0641	0.0016876	550.7718672682902	66.199	1.1831	66.226	65.995	67.179	0.027321					126	60	4	0	0	0	0.3636	1	6314	6314		60.294	17.819	1	1485600	+		5444	24917	3747	3751	6074	6074					-0.01979841242814473
DYRRERWRK	9	Unmodified	_DYRRERWRK_					0	0	0		nc|ENSG00000152404|Q2TBE0-2|CWF19L2;ENSG00000152404|ENST00000282251|CWF19L2;nc|ENSG00000152404|Q2TBE0-3|CWF19L2	nc|ENSG00000152404|Q2TBE0-2|CWF19L2	nc|ENSG00000152404|Q2TBE0-2|CWF19L2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.9402160644531	3	455.581326	1363.72215	-0.0028178	-1.2837E-06	1.7481	0.00079641	1.7453	0.00079513	455.58208447124036	20.601	0.40033	19.971	19.718	20.118	-0.6296					10	8	2	0	0	0	0.20789	1	692	692		17.468	13.055	1	24415			5445	5172	3748	3752	6075	6075					0.05483724765917941
EAAADVANGQP	11	Unmodified	_EAAADVANGQP_					0	0	0		ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	521.7449340820312	2	521.743628	1041.4727	-0.027159	-1.417E-05	3.7916	0.0019782	3.7644	0.0019641	521.7454550117258	57.581	0.4487	57.567	57.338	57.786	-0.013641					31	17	2	0	0	0	0.65746	1	5207	5207		37.812	0.65241	1	180880			5446	6566	3749	3753	6076	6076					-0.04637502701143603
EAAAGSELALR	11	Unmodified	_EAAAGSELALR_					0	0	0		ENSG00000174721|ENST00000311575|FGFBP3	ENSG00000174721|ENST00000311575|FGFBP3	ENSG00000174721|ENST00000311575|FGFBP3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.3245239257812	2	544.290745	1086.56694	-1.1981	-0.00065212	1.1049	0.00060141	-0.093168	-5.071E-05	544.291287581654	38.731	0.41506	39.073	38.817	39.232	0.34187					18	9	2	0	0	0	0.16261	1	3177	3177		49.536	5.1589	1	245260			5447	6958	3750	3754	6077	6077					0.02711636120966432
EAAELLYYFEE	11	Unmodified	_EAAELLYYFEE_					0	0	0			REV__nc|ENSG00000069020|O15021-2|MAST4	REV__nc|ENSG00000069020|O15021-2|MAST4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7582092285156	3	459.546731	1375.61836	-1.2624	-0.00058013	3.1782	0.0014605	1.9158	0.0008804	459.5481893219517	28.467	0.57285	28.37	28.139	28.711	-0.096947					18	13	2	0	0	0	0.17375	1	1750	1750		30.569	9.5366	1	70037	+		5448	16574	3751	3755	6078	6078					-0.0544208469559635
EAAGEVRAM	9	Oxidation (M)	_EAAGEVRAM(Oxidation (M))_		EAAGEVRAM(1)		EAAGEVRAM(53)	0	0	1		ENST00000256015.4_1_12:92539535-92539610:-|nuORF	ENST00000256015.4_1_12:92539535-92539610:-|nuORF	ENST00000256015.4_1_12:92539535-92539610:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.2225341796875	2	475.224017	948.43348	0.16074	7.6388E-05	0.12309	5.8496E-05	0.28383	0.00013488	475.2239634085171	26.709	1.9087	26.533	25.72	27.628	-0.17559					69	42	2	0	0	0	0.48102	1	1459	1459		52.937	6.9847	1	124270			5449	9335	3752	3756	6079	6079		162			-0.04279926256356248
EAAGEVRAM	9	Unmodified	_EAAGEVRAM_					0	0	0		ENST00000256015.4_1_12:92539535-92539610:-|nuORF	ENST00000256015.4_1_12:92539535-92539610:-|nuORF	ENST00000256015.4_1_12:92539535-92539610:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.22503662109375	2	467.226559	932.438566	-1.0001	-0.00046727	1.2477	0.00058294	0.24757	0.00011567	467.22696183985306	31.326	0.69073	31.406	31.165	31.856	0.079834					35	15	3	0	0	0	0.39367	1	2097	2097		58.23	4.8785	1	1186600			5450	9335	3752	3757	6080	6080					-0.030356223937360483
EAAGEVRAM	9	Unmodified	_EAAGEVRAM_					0	0	0		ENST00000256015.4_1_12:92539535-92539610:-|nuORF	ENST00000256015.4_1_12:92539535-92539610:-|nuORF	ENST00000256015.4_1_12:92539535-92539610:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	467.226559	932.438566	-0.035798	-1.6726E-05	-0.053116	-2.4817E-05	-0.088914	-4.1543E-05	467.2263680087748	31.334	0.68438	31.338	31.015	31.699	0.0037212	-0.034045	-0.00062116	NaN	58.23	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1502200			5451	9335	3752	3757							-0.030356223937360483
EAALAAGMQVV	11	Unmodified	_EAALAAGMQVV_					0	0	0		nc|ENSG00000130021|Q08623-2|PUDP;ENSG00000130021|ENST00000381077|PUDP;nc|ENSG00000130021|Q08623-4|PUDP	nc|ENSG00000130021|Q08623-2|PUDP	nc|ENSG00000130021|Q08623-2|PUDP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2799072265625	2	530.278792	1058.54303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.747	1	60.848	60.348	61.348	0.10082								0	0	0	0.56276	1	5270	5270		35.152	0.97948	1				5452	3614	3753	3758	6081	6081					0.016100793629675536
EAALRALGP	9	Unmodified	_EAALRALGP_					0	0	0		ENSG00000130307|ENST00000252597|USHBP1	ENSG00000130307|ENST00000252597|USHBP1	ENSG00000130307|ENST00000252597|USHBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.2583923339844	2	449.261259	896.507966	0.2071	9.3041E-05	-2.3216	-0.001043	-2.1145	-0.00094997	449.2600548275645	70.792	0.56116	70.83	70.579	71.14	0.038055					50	29	2	0	0	0	0.76255	1	6784	6784		35.618	0	1	227980			5453	3635	3754	3759	6082	6082					0.05557204617332445
EAAMKLETEK	10	Unmodified	_EAAMKLETEK_					0	0	0		ENSG00000118492|ENST00000397944|ADGB;nc|ENSG00000118492|Q8N7X0-2|ADGB	ENSG00000118492|ENST00000397944|ADGB	ENSG00000118492|ENST00000397944|ADGB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.292724609375	2	575.294639	1148.57472	-0.40049	-0.0002304	-3.8927	-0.0022395	-4.2932	-0.0024699	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.57924	1	8637	8637		51.193	6.8155	1	1396200			5454	3032	3755	3760	6083	6083					0.006380273262720948
EAAPRAPQAL	10	Unmodified	_EAAPRAPQAL_					0	0	0		nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;ENSG00000168264|ENST00000366609|IRF2BP2	nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2	nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2827758789062	2	512.282723	1022.55089	0.037195	1.9054E-05	0.79928	0.00040946	0.83647	0.00042851	512.2826017379747	34.059	0.51579	34.055	33.818	34.334	-0.0047417					23	11	3	0	0	0	0.82886	1	2043	2043		37.812	1.3648	1	49852			5455	6385	3756	3761	6084	6084					0.0405197467475773
EAAQAVRQLA	10	Unmodified	_EAAQAVRQLA_					0	0	0			REV__ENSG00000136002|ENST00000409359|ARHGEF4	REV__ENSG00000136002|ENST00000409359|ARHGEF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7927856445312	2	528.793455	1055.57236	1.0935	0.00057822	-1.1708	-0.00061909	-0.077289	-4.087E-05	528.7928379036528	35.778	2.2829	36.025	35.438	37.721	0.24769					158	56	6	0	0	0	0.37206	1	2800	2800		66.429	13.34	1	16698000	+		5456	19279	3757	3762	6085	6085					0.04679359703482078
EAAQPAPAQAL	11	Unmodified	_EAAQPAPAQAL_					0	0	0			REV__nc|ENSG00000173638|P41440-2|SLC19A1	REV__nc|ENSG00000173638|P41440-2|SLC19A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.7791748046875	2	533.780013	1065.54547	0.17776	9.4886E-05	-0.40425	-0.00021578	-0.22649	-0.0001209	533.7797939792696	38.597	0.59984	38.569	38.299	38.898	-0.027843					25	13	3	0	0	0	0.62614	1	2626	2626		41.427	2.1738	1	138490	+		5457	21940	3758	3763	6086	6086					0.015322510922715082
EAARALSPQ	9	Unmodified	_EAARALSPQ_					0	0	0		ENSG00000161381|ENST00000315392|PLXDC1;nc|ENSG00000161381|Q8IUK5-3|PLXDC1;nc|ENSG00000161381|Q8IUK5-2|PLXDC1;ENST00000394318.7_1_17:37235696-37307690:-|nuORF	ENSG00000161381|ENST00000315392|PLXDC1	ENSG00000161381|ENST00000315392|PLXDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.75372314453125	2	471.753798	941.493044	-0.22059	-0.00010407	0.19881	9.3787E-05	-0.021789	-1.0279E-05	471.7537183804241	32.173	0.64612	32.299	31.988	32.634	0.12643					34	14	3	0	0	0	0.64555	1	2216	2216		44.377	0	1	578040			5458	5634	3759	3764	6087	6087					0.019957127493285043
EAARGPDATDG	11	Unmodified	_EAARGPDATDG_					0	0	0			REV__ENST00000589123.5_2_19:3462863-3463967:+|nuORF	REV__ENST00000589123.5_2_19:3462863-3463967:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2411499023438	2	530.238709	1058.46287	-0.033627	-1.783E-05	4.3792	0.002322	4.3455	0.0023042	530.240968765566	111.53	2.3024	111.47	110.12	112.42	-0.059937					158	81	3	0	0	0	0.68532	1	12100	12100		33.922	2.3918	1	182550	+		5459	29156	3760	3765	6088	6088					-0.06402690706522662
EAASQGLLK	9	Unmodified	_EAASQGLLK_					0	0	0		ENSG00000160972|ENST00000435887|PPP1R16A	ENSG00000160972|ENST00000435887|PPP1R16A	ENSG00000160972|ENST00000435887|PPP1R16A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.759765625	2	458.758549	915.502546	0.64958	0.000298	-0.6151	-0.00028218	0.03447	1.5814E-05	458.75808970868314	28.836	1.0267	28.663	28.294	29.32	-0.17336					44	24	4	0	0	0	0.51307	1	1805	1805		51.335	1.8939	1	328910			5460	5623	3761	3766	6089	6089					0.04141481034878325
EAAVGAVVAL	10	Unmodified	_EAAVGAVVAL_					0	0	0			REV__ENSG00000182544|ENST00000329548|MFSD5	REV__ENSG00000182544|ENST00000329548|MFSD5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2611999511719	2	450.263468	898.512382	-1.3168	-0.00059292	-1.4351	-0.00064616	-2.7519	-0.0012391	450.26266605332285	40.083	0.97701	40.672	40	40.977	0.58915					56	23	3	0	0	0	0.86482	1	3425	3425		25.45	1.2474	1	1196000	+		5461	22532	3762	3767	6090	6090					0.05906669040234647
EAAWGWLHLL	10	Unmodified	_EAAWGWLHLL_					0	0	0			REV__ENST00000454036.6_2_20:44673649-44676200:+|nuORF	REV__ENST00000454036.6_2_20:44673649-44676200:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.7929077148438	2	598.316566	1194.61858	0.50818	0.00030405	-0.25677	-0.00015363	0.25141	0.00015042	598.3162484804533	53.293	0.57906	53.707	53.457	54.036	0.4139					31	13	3	0	0	0	0.37624	1	5414	5414		24.203	0	1	490210	+		5462	26917	3763	3768	6091	6091					0.02905424605569351
EADAIANQLN	10	Unmodified	_EADAIANQLN_					0	0	0			REV__ENST00000552629.5_1_12:52910419-52914113:-|nuORF	REV__ENST00000552629.5_1_12:52910419-52914113:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.781494140625	2	529.759278	1057.504	0.42758	0.00022651	0.73164	0.00038759	1.1592	0.00061411	529.7592838880411	49.402	0.28368	49.862	49.789	50.073	0.45983					9	6	2	0	0	0	0.37624	1	4835	4835		30.318	6.115	1	174410	+	+	5463	15982	3764	3769	6092	6092					-0.022449296670401964
EADLIAKAGH	10	Unmodified	_EADLIAKAGH_					0	0	0			REV__ENST00000462073.5_1_22:30688366-30689945:-|nuORF	REV__ENST00000462073.5_1_22:30688366-30689945:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.7741088867188	2	512.774731	1023.53491	-0.050404	-2.5846E-05	-0.62987	-0.00032298	-0.68027	-0.00034882	512.7743229859149	45.174	0.62418	45.105	44.768	45.392	-0.06863					30	14	3	0	0	0	0.74274	1	3219	3219		42.396	5.9494	1	318280	+		5464	17122	3765	3770	6093	6093					0.02408268437852712
EADPPCLH	8	Unmodified	_EADPPCLH_					0	0	0			REV__ENST00000576359.1_1_17:80616295-80616565:-|nuORF	REV__ENST00000576359.1_1_17:80616295-80616565:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.1944885253906	2	441.194728	880.374903	1.3728	0.00060569	3.186	0.0014057	4.5589	0.0020114	441.19600127736516	103.65	0.51379	103.84	103.6	104.11	0.18888					28	12	3	0	0	0	0.9159	1	12610	12610		44.531	0	1	649240	+		5465	28994	3766	3771	6094	6094					-0.07006982830841935
EADPPCLH	8	Unmodified	_EADPPCLH_					0	0	0			REV__ENST00000576359.1_1_17:80616295-80616565:-|nuORF	REV__ENST00000576359.1_1_17:80616295-80616565:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.1949157714844	2	441.194728	880.374903	1.4	0.00061767	2.1395	0.00094395	3.5395	0.0015616	441.1959759041456	104.26	0.74777	104.45	104.11	104.86	0.18888					31	17	3	0	0	0	0.9159	1	12680	12680		44.531	0	1	328410	+		5466	28994	3766	3771	6095	6095					-0.07006982830841935
EADPPCLH	8	Unmodified	_EADPPCLH_					0	0	0			REV__ENST00000576359.1_1_17:80616295-80616565:-|nuORF	REV__ENST00000576359.1_1_17:80616295-80616565:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.19488525390625	2	441.194728	880.374903	3.4968	0.0015428	1.0106	0.00044586	4.5074	0.0019886	441.19511689467936	103.62	0.69962	103.88	103.54	104.24	0.26524					27	16	2	0	0	0	0.84634	2	12646	12646;12657		60.294	15.763	1	651080	+		5467	28994	3766	3771	6096;6097	6096					-0.07006982830841935
EADPPCLH	8	Unmodified	_EADPPCLH_					0	0	0			REV__ENST00000576359.1_1_17:80616295-80616565:-|nuORF	REV__ENST00000576359.1_1_17:80616295-80616565:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	441.194728	880.374903	3.4968	0.0015428	1.0106	0.00044586	4.5074	0.0019886	441.19511689467936	103.62	0.69962	103.88	103.54	104.24	0.26524	0.020843	-0.0010881	NaN	60.294	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	651080	+		5468	28994	3766	3771							-0.07006982830841935
EADQTVLLL	9	Unmodified	_EADQTVLLL_					0	0	0			REV__ENST00000498831.1_1_3:183854405-183855259:+|nuORF	REV__ENST00000498831.1_1_3:183854405-183855259:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.2584533691406	2	501.279315	1000.54408	-0.17298	-8.671E-05	0.13563	6.7991E-05	-0.037343	-1.8719E-05	501.27922156971056	54.409	0.67175	54.994	54.749	55.421	0.58474					22	15	2	0	0	0	0.20789	1	5534	5534		27.882	0	1	278810	+		5469	27795	3767	3772	6098	6098					0.04382617003534506
EAEAQRLQGQ	10	Unmodified	_EAEAQRLQGQ_					0	0	0			REV__ENST00000463539.5_1_16:774659-775081:-|nuORF	REV__ENST00000463539.5_1_16:774659-775081:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	565.2864379882812	2	565.283451	1128.55235	-0.47259	-0.00026715	3.7795	0.0021365	3.3069	0.0018693	565.2854068623111	51.357	0.53878	51.334	51.027	51.566	-0.02343					21	12	2	0	0	0	0.51302	1	4500	4500		54.776	1.6874	1	183050	+		5470	20790	3768	3773	6099	6099					-0.006784360271467449
EAEEEVEDGDE	11	Unmodified	_EAEEEVEDGDE_					0	0	0			REV__nc|ENSG00000142192|P05067-10|APP	REV__nc|ENSG00000142192|P05067-10|APP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.73193359375	2	625.730777	1249.447	-0.12245	-7.6622E-05	1.1187	0.00069998	0.99621	0.00062336	625.7314136741637	32.471	0.90553	32.465	32.17	33.076	-0.0061455					50	22	3	0	0	0	0.7434	1	1874	1874		23.523	2.5758	1	190790	+		5471	19728	3769	3774	6100	6100					-0.16774486524741405
EAEGAMVH	8	Unmodified	_EAEGAMVH_					0	0	0		ENST00000526183.5_1_8:145723359-145723767:+|nuORF	ENST00000526183.5_1_8:145723359-145723767:+|nuORF	ENST00000526183.5_1_8:145723359-145723767:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1888732910156	2	422.186903	842.359253	2.6651	0.0011252	0.26686	0.00011267	2.932	0.0012378	422.1875352500893	101.42	0.78451	101.74	101.5	102.29	0.3251					49	21	3	0	0	0	0.89567	1	12379	12379		57.453	5.1535	1	3340500			5472	13253	3770	3775	6101	6101					-0.06823269347876249
EAEGNQVYF	9	Unmodified	_EAEGNQVYF_					0	0	0		ENSG00000107554|ENST00000324109|DNMBP;nc|ENSG00000107554|Q6XZF7-2|DNMBP	ENSG00000107554|ENST00000324109|DNMBP	ENSG00000107554|ENST00000324109|DNMBP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.2725830078125	2	528.735271	1055.45599	0.37336	0.00019741	-0.10669	-5.6411E-05	0.26667	0.000141	528.7350497153994	75.142	0.37923	75.537	75.279	75.658	0.39507					11	8	2	0	0	0	0.20789	1	8459	8459		44.117	16.235	1	108610			5473	2350	3771	3776	6102	6102					-0.06952003587093714
EAEHQRRR	8	Unmodified	_EAEHQRRR_					0	0	0			REV__nc|ENSG00000178209|Q15149-7|PLEC	REV__nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.2862548828125	2	541.28412	1080.55369	0.90507	0.0004899	1.5075	0.00081599	2.4126	0.0013059	541.2848148372841	20.292	0.81443	20.271	20.029	20.843	-0.020922					88	41	3	0	0	0	0.89494	1	484	484		37.159	5.6293	1	521470	+		5474	22265	3772	3777	6103	6103					0.016632428522598275
EAEYHCGESHT	11	Unmodified	_EAEYHCGESHT_					0	0	0		nc|ENSG00000211672|A0A075B6K6|IGLV4-3	nc|ENSG00000211672|A0A075B6K6|IGLV4-3	nc|ENSG00000211672|A0A075B6K6|IGLV4-3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.49615478515625	3	421.496265	1261.46697	-1.0671	-0.00044976	-1.0418	-0.00043913	-2.1089	-0.00088889	421.8287075529137	65.134	0.24265	65.172	65.015	65.257	0.037849					9	7	2	0	0	0	0.72374	1	5775	5775		27.644	0	1	43750			5475	15231	3773	3778	6104	6104					-0.15330969275123607
EAFGDTRHP	9	Unmodified	_EAFGDTRHP_					0	0	0			REV__ENSG00000047410|ENST00000367478|TPR	REV__ENSG00000047410|ENST00000367478|TPR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	515.240966796875	2	515.241055	1028.46756	0.33773	0.00017401	-1.5948	-0.0008217	-1.2571	-0.00064769	515.2401038031029	47.483	0.76162	47.52	47.314	48.076	0.037731					48	27	3	0	0	0	0.17181	1	3566	3566		79.713	10.926	1	705570	+		5476	16352	3774	3779	6105	6105					-0.0455376177310427
EAFREHQQY	9	Unmodified	_EAFREHQQY_					0	0	0		nc|ENSG00000133106|Q96J88-3|EPSTI1;ENST00000535677.5_1_13:43491732-43537592:-|nuORF;ENSG00000133106|ENST00000313624|EPSTI1;nc|ENSG00000133106|Q96J88|EPSTI1	nc|ENSG00000133106|Q96J88-3|EPSTI1	nc|ENSG00000133106|Q96J88-3|EPSTI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.2798461914062	2	604.278169	1206.54179	0.79346	0.00047947	-0.88063	-0.00053214	-0.087169	-5.2674E-05	604.2774646397876	28.744	0.43819	28.571	28.365	28.803	-0.17336					23	10	3	0	0	0	0.75725	1	1768	1768		36.447	1.2947	1	124450			5477	14926	3775	3780	6106	6106					-0.05322418681566887
EAFVRHIL	8	Unmodified	_EAFVRHIL_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000412707.1_1_17:69617202-69617574:+|nuORF	ENSG00000092841|ENST00000550697|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.7842712402344	2	492.784902	983.55525	0.18633	9.182E-05	-0.79077	-0.00038968	-0.60444	-0.00029786	492.78443648654866	46.388	1.4747	46.374	45.748	47.223	-0.013821					98	37	4	0	0	0	6.3068E-08	4	3707	3695;3707;3718;3729		152.63	54.377	1	3328000			5478	1704	3776	3781	6107;6108;6109;6110	6108					0.06281483888335515
EAFVRHIL	8	Unmodified	_EAFVRHIL_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000412707.1_1_17:69617202-69617574:+|nuORF	ENSG00000092841|ENST00000550697|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.7842102050781	2	492.784902	983.55525	-0.78798	-0.0003883	0.11569	5.7012E-05	-0.67228	-0.00033129	492.78488722274767	46.323	1.5481	46.294	45.886	47.434	-0.028782					98	38	4	0	0	0	0.0013561	4	3789	3777;3789;3801;3813		138.24	58.303	1	3713600			5479	1704	3776	3781	6111;6112;6113;6114	6112					0.06281483888335515
EAFVRHIL	8	Unmodified	_EAFVRHIL_					0	0	0		ENSG00000092841|ENST00000550697|MYL6;ENST00000412707.1_1_17:69617202-69617574:+|nuORF	ENSG00000092841|ENST00000550697|MYL6	ENSG00000092841|ENST00000550697|MYL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.7839050292969	2	492.784902	983.55525	-1.7557	-0.00086517	1.1001	0.00054211	-0.65557	-0.00032305	492.7853693728678	46.395	1.5672	46.39	45.989	47.556	-0.0041618					99	39	4	0	0	0	0.0013561	5	3723	3712;3723;3735;3747;3757		138.24	49.599	1	3779300			5480	1704	3776	3781	6115;6116;6117;6118;6119	6116					0.06281483888335515
EAGDDEREL	9	Unmodified	_EAGDDEREL_					0	0	0		nc|ENSG00000116396|Q03721-2|KCNC4;ENST00000489935.1_1_1:110754121-110766653:+|nuORF;ENSG00000116396|ENST00000438661|KCNC4;nc|ENSG00000116396|Q03721|KCNC4	nc|ENSG00000116396|Q03721-2|KCNC4	nc|ENSG00000116396|Q03721-2|KCNC4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.8167724609375	2	517.225268	1032.43598	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.51	1	112.54	112.04	113.04	0.030602								0	0	0	0.28386	1	13608	13608		37.159	6.6555	1				5481	2919	3777	3782	6120	6120					-0.07893799317707817
EAGECKRG	8	Unmodified	_EAGECKRG_					0	0	0			REV__ENST00000412095.1_1_6:32812086-32812371:+|nuORF	REV__ENST00000412095.1_1_6:32812086-32812371:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.1960754394531	2	425.197802	848.381051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.26	1	103.48	102.98	103.98	0.22556								0	0	0	0.29703	1	12550	12550		37.159	5.2042	1		+		5482	26375	3778	3783	6121	6121					-0.04920464599308616
EAGELRKPT	9	Unmodified	_EAGELRKPT_					0	0	0		nc|ENSG00000156194|O14830-2|PPEF2;ENSG00000156194|ENST00000286719|PPEF2	nc|ENSG00000156194|O14830-2|PPEF2	nc|ENSG00000156194|O14830-2|PPEF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.773193359375	2	500.774731	999.534909	-0.62804	-0.00031451	-0.34957	-0.00017506	-0.97762	-0.00048957	500.7747313085481	50.418	0.47705	50.394	50.12	50.597	-0.02343					15	10	2	0	0	0	0.69624	1	4371	4371		40.778	1.5253	1	59241			5483	5366	3779	3784	6122	6122					0.03512268437839339
EAGGDLRRR	9	Unmodified	_EAGGDLRRR_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;ENST00000505306.5_1_17:48133647-48154208:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2783203125	2	515.281046	1028.54754	-0.6986	-0.00035998	1.2502	0.0006442	0.55158	0.00028422	515.281060835213	43.256	0.16581	43.69	43.544	43.71	0.4334					6	3	2	0	0	0	0.20789	1	3899	3899		19.997	0	1	157490			5484	689	3780	3785	6123	6123					0.03440724620736546
EAGNEEEEVV	10	Unmodified	_EAGNEEEEVV_					0	0	0			REV__ENSG00000159335|ENST00000309083|PTMS	REV__ENSG00000159335|ENST00000309083|PTMS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.809814453125	2	552.738208	1103.46186	0.88522	0.00048929	3.5565	0.0019658	4.4417	0.0024551	552.7391449484633	28.292	0.18092	28.119	27.979	28.16	-0.17336					6	4	2	0	0	0	0.37624	1	1710	1710		60.118	38.158	1	23757	+		5485	20654	3781	3786	6124	6124					-0.08572949866083945
EAGPFPLTTL	10	Unmodified	_EAGPFPLTTL_					0	0	0			REV__ENSG00000181751|ENST00000319933|MACIR	REV__ENSG00000181751|ENST00000319933|MACIR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2826538085938	2	523.281857	1044.54916	-0.78803	-0.00041236	-4.1036	-0.0021473	-4.8916	-0.0025597	523.2791520366875	44.856	0.45226	45.7	45.501	45.954	0.84437					18	10	2	0	0	0	0.30722	1	4181	4181		71.877	22.436	1	487830	+		5486	22477	3782	3787	6125	6125					0.02866920866131295
EAGRCLCKG	9	Unmodified	_EAGRCLCKG_					0	0	0			REV__ENST00000302424.11_1_10:104417132-104417561:+|nuORF	REV__ENST00000302424.11_1_10:104417132-104417561:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72283935546875	2	468.723129	935.431706	1.0684	0.00050079	-0.084326	-3.9526E-05	0.98408	0.00046126	468.7229595267066	94.221	0.99142	94.654	94.37	95.361	0.4324					49	25	3	0	0	0	0.78058	1	11234	11234		30.504	0.6621	1	660150	+		5487	24783	3783	3788	6126	6126					-0.03859258545958255
EAGSLTPESTG	11	Unmodified	_EAGSLTPESTG_					0	0	0		CON__Q95121	CON__Q95121	CON__Q95121	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.743896484375	2	524.743293	1047.47203	0.86491	0.00045386	-0.049835	-2.6151E-05	0.81508	0.00042771	524.74331637429	25.624	0.89235	25.592	25.164	26.057	-0.032125					47	27	2	0	0	0	0.60058	1	1044	1044		44.377	5.571	1	45071		+	5488	635	3784	3789	6127	6127					-0.04980342140856919
EAIAEIAEKF	10	Unmodified	_EAIAEIAEKF_					0	0	0			REV__ENST00000558588.5_1_15:40583969-40599873:-|nuORF	REV__ENST00000558588.5_1_15:40583969-40599873:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.796875	2	560.797872	1119.58119	0.65712	0.00036851	-1.0007	-0.0005612	-0.34361	-0.00019269	560.7973334997787	80.631	0.5225	80.571	80.319	80.841	-0.059685					20	12	2	0	0	0	0.74274	1	8124	8124		42.396	1.618	1	133380	+		5489	19416	3785	3790	6128	6128					0.02618288549274439
EAIKLVLDKQP	11	Unmodified	_EAIKLVLDKQP_					0	0	0			REV__nc|ENSG00000187627|P0DJD0|RGPD1	REV__nc|ENSG00000187627|P0DJD0|RGPD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3858032226562	2	627.37682	1252.73909	6.5843	0.0041309	2.7627	0.0017332	9.347	0.0058641	627.3785206095984	117.88	0.78392	117.8	117.55	118.33	-0.077652					52	36	2	0	0	0	0.77061	1	14062	14062		17.468	0.75062	1	44020	+		5490	22758	3786	3791	6129	6129					0.12282787808499052
EAINQIALL	9	Unmodified	_EAINQIALL_					0	0	0			REV__ENST00000509957.5_1_5:37142364-37158376:-|nuORF	REV__ENST00000509957.5_1_5:37142364-37158376:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.78985595703125	2	492.78985	983.565146	-0.8454	-0.0004166	0.47146	0.00023233	-0.37394	-0.00018427	492.7897090609867	31.851	0.9009	31.977	31.431	32.332	0.12642					44	20	3	0	0	0	0.51307	1	2176	2176		51.335	1.7994	1	226950	+		5491	23252	3787	3792	6130	6130					0.07270627103048355
EAIQQLRTE	9	Unmodified	_EAIQQLRTE_					0	0	0		ENST00000512780.2_1_4:4459120-4543730:-|nuORF;ENST00000583091.1_1_17:28395652-28396225:+|nuORF;ENSG00000168818|ENST00000306200|STX18	ENST00000512780.2_1_4:4459120-4543730:-|nuORF	ENST00000512780.2_1_4:4459120-4543730:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.8304443359375	2	544.290745	1086.56694	0.84709	0.00046106	-2.0486	-0.001115	-1.2015	-0.00065398	544.7913803756894	36.756	0.95599	37.242	36.874	37.83	0.4858					41	22	3	0	0	0	0.20789	1	2969	2969		24.519	16.715	1	72032			5492	6441	3788	3793	6131	6131					0.027116361209891693
EAIQRTPK	8	Unmodified	_EAIQRTPK_					0	0	0		ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	ENSG00000166710|ENST00000648006|B2M	ENSG00000166710|ENST00000648006|B2M	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.771484375	2	471.771991	941.529429	-0.19914	-9.3949E-05	-0.44384	-0.00020939	-0.64298	-0.00030334	471.7718032420007	32.184	0.81778	32.31	31.988	32.805	0.12643					30	18	2	0	0	0	0.36305	2	2240	2237;2240		96.19	13.62	1	672510			5493	6222	3789	3794	6132;6133	6133					0.05632589646040742
EAIQRTPK	8	Unmodified	_EAIQRTPK_					0	0	0		ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	ENSG00000166710|ENST00000648006|B2M	ENSG00000166710|ENST00000648006|B2M	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7718505859375	2	471.771991	941.529429	-0.083673	-3.9475E-05	-0.21942	-0.00010352	-0.30309	-0.00014299	471.771717611514	32.104	0.60151	32.211	31.93	32.532	0.10707					25	13	2	0	0	0	0.41855	1	2253	2253		79.713	2.9384	1	710380			5494	6222	3789	3794	6134	6134					0.05632589646040742
EAIRISPTF	9	Unmodified	_EAIRISPTF_					0	0	0		nc|ENSG00000147162|O15294-4|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;ENSG00000147162|ENST00000373719|OGT	nc|ENSG00000147162|O15294-4|OGT	nc|ENSG00000147162|O15294-4|OGT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2879028320312	2	517.287474	1032.5604	-0.49691	-0.00025704	0.64304	0.00033264	0.14613	7.5591E-05	517.2876936673596	59.496	0.8479	59.887	59.525	60.373	0.39077					50	20	3	0	0	0	2.6378E-08	2	6276	6265;6276		157.33	72.14	1	1342100			5495	4886	3790	3795	6135;6136	6136					0.04541742960282136
EAIRISPTF	9	Unmodified	_EAIRISPTF_					0	0	0		nc|ENSG00000147162|O15294-4|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;ENSG00000147162|ENST00000373719|OGT	nc|ENSG00000147162|O15294-4|OGT	nc|ENSG00000147162|O15294-4|OGT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2879638671875	2	517.287474	1032.5604	-0.45226	-0.00023395	0.4597	0.0002378	0.0074406	3.8489E-06	517.2875423693157	59.411	0.96626	59.964	59.536	60.502	0.55323					58	24	4	0	0	0	2.7574E-05	3	6269	6260;6269;6287		153.04	64.393	1	1533200			5496	4886	3790	3795	6137;6138;6139	6138					0.04541742960282136
EAITQEIV	8	Unmodified	_EAITQEIV_					0	0	0		nc|ENSG00000009844|Q9NP79-2|VTA1;ENSG00000009844|ENST00000367630|VTA1	nc|ENSG00000009844|Q9NP79-2|VTA1	nc|ENSG00000009844|Q9NP79-2|VTA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.74652099609375	2	451.745108	901.475663	-0.15926	-7.1944E-05	1.5976	0.0007217	1.4383	0.00064975	451.7456935089162	34.126	0.74651	34.336	34.065	34.812	0.21002					38	17	3	0	0	0	0.60155	2	2504	2504;2517		71.378	0	1	1779600			5497	758	3791	3796	6140;6141	6140					0.020983724236771195
EAITQEIV	8	Unmodified	_EAITQEIV_					0	0	0		nc|ENSG00000009844|Q9NP79-2|VTA1;ENSG00000009844|ENST00000367630|VTA1	nc|ENSG00000009844|Q9NP79-2|VTA1	nc|ENSG00000009844|Q9NP79-2|VTA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.74786376953125	2	451.745108	901.475663	1.1627	0.00052525	0.59431	0.00026848	1.757	0.00079372	451.74501177716866	34.109	0.65865	34.414	34.117	34.776	0.30494					34	15	3	0	0	0	0.84634	1	2513	2513		60.294	0	1	1538300			5498	758	3791	3796	6142	6142					0.020983724236771195
EAKAVKKT	8	Unmodified	_EAKAVKKT_					0	0	0		ENSG00000099290|ENST00000282633|WASHC2A;nc|ENSG00000099290|Q641Q2-2|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C	ENSG00000099290|ENST00000282633|WASHC2A	ENSG00000099290|ENST00000282633|WASHC2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77166748046875	2	437.77146	873.528367	-0.60383	-0.00026434	1.3933	0.00060996	0.7895	0.00034562	437.771905353534	38.344	0.47827	38.686	38.418	38.896	0.34187					32	11	3	0	0	0	0.89043	1	3134	3134		35.618	3.6634	1	1117700			5499	1753	3792	3797	6143	6143					0.08654375277126292
EAKAVKKT	8	Unmodified	_EAKAVKKT_					0	0	0		ENSG00000099290|ENST00000282633|WASHC2A;nc|ENSG00000099290|Q641Q2-2|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C	ENSG00000099290|ENST00000282633|WASHC2A	ENSG00000099290|ENST00000282633|WASHC2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7712707519531	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.80514	1	3007	3007		19.104	3.4617	1	13476000			5500	1753	3792	3797	6144	6144					0.08654375277126292
EAKEYYEVI	9	Unmodified	_EAKEYYEVI_					0	0	0		ENSG00000101542|ENST00000262717|CDH20	ENSG00000101542|ENST00000262717|CDH20	ENSG00000101542|ENST00000262717|CDH20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.2818603515625	2	572.282054	1142.54956	-0.68801	-0.00039374	0.7665	0.00043865	0.07849	4.4918E-05	572.2823535347836	63.879	1.3601	64.266	63.833	65.193	0.3868					66	31	3	0	0	0	0.19818	1	6905	6905		74.255	10.048	1	794650			5501	1947	3793	3798	6145	6145					-0.016017042046769348
EAKEYYEVI	9	Unmodified	_EAKEYYEVI_					0	0	0		ENSG00000101542|ENST00000262717|CDH20	ENSG00000101542|ENST00000262717|CDH20	ENSG00000101542|ENST00000262717|CDH20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.28173828125	2	572.282054	1142.54956	0.43104	0.00024668	-0.24525	-0.00014035	0.1858	0.00010633	572.2816733619766	63.723	1.1033	64.277	63.879	64.982	0.5545					68	25	4	0	0	0	0.26953	1	6894	6894		67.494	3.2864	1	840360			5502	1947	3793	3798	6146	6146					-0.016017042046769348
EAKFIVKATN	10	Unmodified	_EAKFIVKATN_					0	0	0		ENST00000216407.4_1_12:68867655-68868498:+|nuORF	ENST00000216407.4_1_12:68867655-68868498:+|nuORF	ENST00000216407.4_1_12:68867655-68868498:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.8201904296875	2	560.821681	1119.62881	0.78776	0.00044179	-4.1287	-0.0023155	-3.341	-0.0018737	560.8192753742564	92.439	2.8901	92.598	91.192	94.082	0.15874					209	68	4	0	0	0	0.86802	1	9347	9347		27.047	0.3544	1	872010			5503	9135	3794	3799	6147	6147					0.07377987540144204
EAKILKSLH	9	Unmodified	_EAKILKSLH_					0	0	0		ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK;chr8:27833133-27837710|59|20.12|0.78|4.69|-|ENST00000522944|PBK,PBK	ENSG00000168078|ENST00000301905|PBK	ENSG00000168078|ENST00000301905|PBK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.81884765625	2	519.818941	1037.62333	0.10898	5.6647E-05	2.1098	0.0010967	2.2188	0.0011534	519.8179795761217	82.398	1.142	82.825	82.43	83.572	0.42646					88	27	5	0	0	0	0.77696	1	9539	9539		31.53	1.6883	1	614770			5504	513	3795	3800	6148	6148					0.10602308748320866
EAKKLKRKKS	10	Unmodified	_EAKKLKRKKS_					0	0	0			REV__nc|ENSG00000040633|Q9BUL5-3|PHF23	REV__nc|ENSG00000040633|Q9BUL5-3|PHF23	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2960205078125	3	405.934706	1214.78229	-0.083351	-3.3835E-05	-4.2867	-0.0017401	-4.3701	-0.001774	405.93291433548046	36.813	1.293	36.794	36.196	37.489	-0.018677					74	28	3	0	0	0	0.37624	1	2460	2460		14.086	7.4264	1	171790	+		5505	16319	3796	3801	6149	6149					0.18349022376446555
EAKQHGGS	8	Unmodified	_EAKQHGGS_					0	0	0		ENSG00000100603|ENST00000261531|SNW1	ENSG00000100603|ENST00000261531|SNW1	ENSG00000100603|ENST00000261531|SNW1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	2	407.196116	812.37768	-0.55156	-0.00022459	-1.6049	-0.00065351	-2.1565	-0.0008781	407.19850960302733	34.176	0.88734	34.12	33.56	34.447	-0.056381					33	19	3	0	0	0	0.4196	1	2138	2138		32.812	4.5581	1	25285			5506	1855	3797	3802	6150	6150					-0.036013913816532295
EAKVKHKEKE	10	Unmodified	_EAKVKHKEKE_					0	0	0			REV__nc|ENSG00000169925|Q15059-2|BRD3	REV__nc|ENSG00000169925|Q15059-2|BRD3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	613.3474731445312	2	613.348594	1224.68264	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.488	1	76.44	75.94	76.94	-0.048264								0	0	0	0.45132	1	7579	7579		36.447	2.5251	1		+		5507	21617	3798	3803	6151	6151					0.07928159971856985
EALCSLLRR	9	Unmodified	_EALCSLLRR_					0	0	0		ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.80078125	2	530.800226	1059.5859	0.14244	7.5609E-05	2.9158	0.0015477	3.0582	0.0016233	530.8016387973313	19.269	0.77006	18.64	18.444	19.214	-0.6296					30	16	3	0	0	0	0.74721	1	494	494		37.159	1.5408	1	272560			5508	6015	3799	3804	6152	6152					0.058488942110670905
EALCSLLRR	9	Unmodified	_EALCSLLRR_					0	0	0		ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	530.800226	1059.5859	-0.19032	-0.00010102	2.7542	0.0014619	2.5639	0.0013609	530.8013386968169	18.45	0.3133	18.494	18.375	18.689	0.044048	-0.048792	0.00019747	NaN	37.159	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88986			5509	6015	3799	3804							0.058488942110670905
EALCSLLRR	9	Unmodified	_EALCSLLRR_					0	0	0		ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	530.800226	1059.5859	0.1114	5.9132E-05	2.9075	0.0015433	3.0189	0.0016024	530.8013822962496	18.338	0.23183	18.405	18.308	18.54	0.066298	-0.13859	0.00036018	NaN	37.159	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89749			5510	6015	3799	3804							0.058488942110670905
EALDGGTGPAR	11	Unmodified	_EALDGGTGPAR_					0	0	0		ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	522.2606811523438	2	522.259445	1042.50434	-0.62349	-0.00032563	2.4312	0.0012697	1.8077	0.00094408	522.2605969318877	43.841	0.53049	43.807	43.537	44.067	-0.033474					27	12	3	0	0	0	0.638	1	3468	3468		40.058	4.4399	1	122950			5511	8154	3800	3805	6153	6153					-0.015215099472015936
EALDGGTGPAR	11	Unmodified	_EALDGGTGPAR_					0	0	0		ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	522.259445	1042.50434	0.31308	0.00016351	1.717	0.0008967	2.03	0.0010602	522.2601775604577	43.829	0.52546	43.802	43.525	44.05	-0.026764	0.0013473	-0.00045711	NaN	40.058	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109070			5512	8154	3800	3805							-0.015215099472015936
EALDGGTGPAR	11	Unmodified	_EALDGGTGPAR_					0	0	0		ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	522.259445	1042.50434	-0.22454	-0.00011727	2.2499	0.0011751	2.0254	0.0010578	522.2606111661487	43.795	0.67563	43.792	43.455	44.131	-0.002449	-0.0081269	9.9597E-05	NaN	40.058	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125960			5513	8154	3800	3805							-0.015215099472015936
EALDLIESDP	10	Unmodified	_EALDLIESDP_					0	0	0		nc|ENSG00000101057|P10244-2|MYBL2;ENSG00000101057|ENST00000217026|MYBL2	nc|ENSG00000101057|P10244-2|MYBL2	nc|ENSG00000101057|P10244-2|MYBL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.2711791992188	2	551.269144	1100.52373	-0.11534	-6.3584E-05	0.32349	0.00017833	0.20815	0.00011474	551.2691188849162	58.587	0.59031	59.14	58.795	59.385	0.55323					32	13	3	0	0	0	0.42393	1	6155	6155		62.107	7.3311	1	943240			5514	1895	3801	3806	6154	6154					-0.022505984469717077
EALDRQND	8	Unmodified	_EALDRQND_					0	0	0			REV__nc|ENSG00000229715|Q658K8|EEF1DP3	REV__nc|ENSG00000229715|Q658K8|EEF1DP3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.27386474609375	2	480.722695	959.430838	-0.083048	-3.9923E-05	1.8356	0.0008824	1.7525	0.00084248	480.7234854028984	57.202	0.44627	57.757	57.519	57.965	0.55512					18	10	2	0	0	0	0.4196	1	5949	5949		45.972	2.3462	1	134230	+		5515	30217	3802	3807	6155	6155					-0.05050058389667811
EALEQRYRQLQ	11	Unmodified	_EALEQRYRQLQ_					0	0	0			REV__ENST00000491746.5_1_15:42134104-42137535:+|nuORF	REV__ENST00000491746.5_1_15:42134104-42137535:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.58709716796875	3	478.588035	1432.74228	-0.064351	-3.0797E-05	-1.6553	-0.00079222	-1.7197	-0.00082302	478.5874879701833	48.705	1.8625	49.165	48.416	50.278	0.45983					145	45	6	0	0	0	0.54689	1	4767	4767		48.602	14.515	1	22356000	+		5516	27661	3803	3808	6156	6156					0.0432143091522903
EALEQRYRQLQ	11	Unmodified	_EALEQRYRQLQ_					0	0	0			REV__ENST00000491746.5_1_15:42134104-42137535:+|nuORF	REV__ENST00000491746.5_1_15:42134104-42137535:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.5875549316406	3	478.588035	1432.74228	-0.82422	-0.00039446	-0.85372	-0.00040858	-1.6779	-0.00080304	478.5878634148912	48.525	1.45	49.429	48.963	50.413	0.90424					125	35	5	0	0	0	0.47591	1	4757	4757		53.597	13.724	1	21529000	+		5517	27661	3803	3808	6157	6157					0.0432143091522903
EALGLDRPASD	11	Unmodified	_EALGLDRPASD_					0	0	0		nc|ENSG00000183337|Q6W2J9-4|BCOR;nc|ENSG00000183337|Q6W2J9-2|BCOR;ENSG00000183337|ENST00000378444|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF	nc|ENSG00000183337|Q6W2J9-4|BCOR	nc|ENSG00000183337|Q6W2J9-4|BCOR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	572.2904663085938	2	572.28566	1142.55677	-1.0194	-0.0005834	4.2194	0.0024147	3.1999	0.0018313	572.2881114485577	53.875	0.57182	53.87	53.598	54.17	-0.0053711					29	14	3	0	0	0	0.62614	1	4752	4752		41.427	4.2675	1	185200			5518	15142	3804	3809	6158	6158					-0.008809716042605942
EALILVHI	8	Unmodified	_EALILVHI_					0	0	0			REV__chr17:50737026-50738137|21|20.29|0.46|5.46|+|0|LUC7L3,LUC7L3|1	REV__chr17:50737026-50738137|21|20.29|0.46|5.46|+|0|LUC7L3,LUC7L3|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7195129394531	2	454.284203	906.553853	-0.5754	-0.00026139	0.43273	0.00019658	-0.14267	-6.4813E-05	454.28429838020617	32.828	0.59433	32.954	32.634	33.228	0.12643					20	13	2	0	0	0	0.4196	1	2315	2315		26.796	0	1	175450	+		5519	15658	3805	3810	6159	6159					0.0968384979955772
EALKQLRTS	9	Unmodified	_EALKQLRTS_					0	0	0		ENSG00000161647|ENST00000398389|MPP3	ENSG00000161647|ENST00000398389|MPP3	ENSG00000161647|ENST00000398389|MPP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3037719726562	2	523.303655	1044.59276	0.8255	0.00043199	-0.87613	-0.00045848	-0.050623	-2.6491E-05	523.3030798217648	101.17	1.685	101.32	100.51	102.19	0.14352					75	40	3	0	0	0	0.7932	1	10593	10593		19.997	1.6724	1	694620			5520	5647	3806	3811	6160	6160					0.07224530363305348
EALKSSNLFVN	11	Unmodified	_EALKSSNLFVN_					0	0	0			REV__ENSG00000276950|ENST00000621179|GSTT4	REV__ENSG00000276950|ENST00000621179|GSTT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.33203125	2	611.327328	1220.6401	-0.91837	-0.00056142	3.9793	0.0024327	3.061	0.0018712	611.32977638209	78.511	1.062	78.605	78.288	79.35	0.0942					75	32	4	0	0	0	0.6493	1	7359	7359		38.754	2.3069	1	422640	+		5521	24021	3807	3812	6161	6161					0.03860764843625475
EALLDISVEA	10	Unmodified	_EALLDISVEA_					0	0	0			REV__nc|ENSG00000100593|Q6H9L7-5|ISM2	REV__nc|ENSG00000100593|Q6H9L7-5|ISM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2842407226562	2	530.282054	1058.54956	0.40735	0.00021601	-0.51853	-0.00027497	-0.11118	-5.8956E-05	530.2816186259668	76.523	0.6665	76.571	76.104	76.771	0.047981					42	26	2	0	0	0	0.86218	1	7447	7447		32.812	4.9302	1	154180	+		5522	17205	3808	3813	6162	6162					0.02262295795344471
EALLQRKH	8	Unmodified	_EALLQRKH_					0	0	0			REV__nc|ENSG00000154310|Q9UKE5-7|TNIK	REV__nc|ENSG00000154310|Q9UKE5-7|TNIK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7921447753906	2	497.793258	993.571963	0.033882	1.6866E-05	-0.29158	-0.00014514	-0.25769	-0.00012828	497.79294802566244	17.498	0.35384	17.015	16.761	17.115	-0.48256					16	7	3	0	0	0	0.85277	1	252	252		25.45	1.2474	1	193010	+		5523	20382	3809	3814	6163	6163					0.07491984774276261
EALLTQKL	8	Unmodified	_EALLTQKL_					0	0	0			REV__nc|ENSG00000167608|Q7Z404-1|TMC4	REV__nc|ENSG00000167608|Q7Z404-1|TMC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.27923583984375	2	458.279118	914.543683	-0.56135	-0.00025726	-0.50937	-0.00023343	-1.0707	-0.00049069	458.2787173636088	47.978	1.1103	48.901	48.278	49.388	0.92315					53	27	3	0	0	0	0.60357	1	4618	4618		71.296	2.5089	1	1383600	+		5524	21403	3810	3815	6164	6164					0.08299242074338053
EALLTQKL	8	Unmodified	_EALLTQKL_					0	0	0			REV__nc|ENSG00000167608|Q7Z404-1|TMC4	REV__nc|ENSG00000167608|Q7Z404-1|TMC4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	458.279118	914.543683	-0.56135	-0.00025726	-0.50937	-0.00023343	-1.0707	-0.00049069	458.2787173636088	47.978	1.1103	48.901	48.278	49.388	0.92315	0.14122	-0.00049056	NaN	71.296	53	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1383600	+		5525	21403	3810	3815							0.08299242074338053
EALNLLGTDS	10	Unmodified	_EALNLLGTDS_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7634887695312	2	516.764029	1031.5135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.544	1	25.511	25.011	26.011	-0.032972								0	0	0	0.45132	1	1023	1023		25.574	0.12388	1				5526	3344	3811	3816	6165	6165					-0.0009916138149037579
EALPDETEVV	10	Unmodified	_EALPDETEVV_					0	0	0		ENST00000521327.1_1_5:151052612-151066451:-|nuORF;ENSG00000113140|ENST00000231061|SPARC	ENST00000521327.1_1_5:151052612-151066451:-|nuORF	ENST00000521327.1_1_5:151052612-151066451:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.26904296875	2	551.269144	1100.52373	-0.11534	-6.3584E-05	0.32349	0.00017833	0.20815	0.00011474	551.2691188849162	58.587	0.59031	59.14	58.795	59.385	0.55323					32	13	3	0	0	0	0.5766	1	6168	6168		51.335	3.6781	1	943240			5527	2699	3812	3817	6166	6166					-0.022505984469717077
EALPGQTAIY	10	Unmodified	_EALPGQTAIY_					0	0	0			REV__ENSG00000142949|ENST00000359947|PTPRF;REV__nc|ENSG00000153707|P23468-2|PTPRD;REV__nc|ENSG00000153707|P23468-7|PTPRD;REV__nc|ENSG00000105426|Q13332-7|PTPRS	REV__ENSG00000142949|ENST00000359947|PTPRF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7788696289062	2	531.776939	1061.53933	0.4715	0.00025073	-4.065	-0.0021616	-3.5935	-0.0019109	532.2768813815442	56.862	0.45569	57.417	57.27	57.725	0.55512					15	10	2	0	0	0	0.37624	1	5892	5892		49.442	1.7842	1	136710	+		5528	19763;20354;29937;17538	3813	3818	6167	6167					0.011017328607522359
EALRPRYLEI	10	Unmodified	_EALRPRYLEI_					0	0	0		ENSG00000124571|ENST00000265351|XPO5;ENST00000455854.2_1_6:43491608-43492751:-|nuORF	ENSG00000124571|ENST00000265351|XPO5	ENSG00000124571|ENST00000265351|XPO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.57513427734375	3	420.575067	1258.70337	2.2578	0.00094957	-1.5513	-0.00065242	0.70654	0.00029715	420.57436273463946	46.941	0.83286	46.937	46.593	47.426	-0.0041618					58	20	4	0	0	0	0.86338	1	3816	3816		31.634	3.0575	1	858330			5529	3343	3814	3819	6168	6168					0.08436750351506817
EALVKPIL	8	Unmodified	_EALVKPIL_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7880554199219	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.86294	1	2643	2643		8.8223	0	1	15753000	+		5530	17426	3815	3820	6169	6169					0.11308733942325944
EALYGLLALI	10	Unmodified	_EALYGLLALI_					0	0	0		ENSG00000084710|ENST00000403714|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B;nc|ENSG00000084710|Q9Y2G0-2|EFR3B	ENSG00000084710|ENST00000403714|EFR3B	ENSG00000084710|ENST00000403714|EFR3B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267211914062	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.09	1	114.07	113.57	114.57	-0.024452								0	0	0	0.45132	1	12634	12634		38.806	1.647	1				5531	1523	3816	3821	6170	6170					0.09816657313990618
EANFLGVKSEK	11	Unmodified	_EANFLGVKSEK_					0	0	0			REV__ENSG00000129988|ENST00000217407|LBP	REV__ENSG00000129988|ENST00000217407|LBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3307495117188	2	611.327328	1220.6401	1.1116	0.00067957	2.0124	0.0012302	3.1241	0.0019098	611.3286276945797	78.517	1.0448	78.644	78.256	79.301	0.12695					71	31	4	0	0	0	0.67762	1	7427	7427		35.178	4.8605	1	448710	+		5532	18840	3817	3822	6171	6171					0.038607648436027375
EANKEQLIK	9	Unmodified	_EANKEQLIK_					0	0	0			REV__ENSG00000180777|ENST00000690538|ANKRD30B	REV__ENSG00000180777|ENST00000690538|ANKRD30B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.8033447265625	2	536.803488	1071.59242	0.44089	0.00023667	-0.7115	-0.00038194	-0.27062	-0.00014527	536.803069174613	26.4	1.1845	26.361	25.89	27.075	-0.038523					63	27	4	0	0	0	0.086373	1	1182	1182		95.815	0	1	879030	+		5533	22416	3818	3823	6172	6172					0.05949110643427957
EAPAFLVRR	9	Unmodified	_EAPAFLVRR_					0	0	0		ENST00000416640.2_3_22:21698217-21699360:+|nuORF	ENST00000416640.2_3_22:21698217-21699360:+|nuORF	ENST00000416640.2_3_22:21698217-21699360:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.2734375	2	529.808908	1057.60326	-0.10296	-5.4547E-05	-1.271	-0.0006734	-1.374	-0.00072794	529.8081909835753	75.588	0.67183	75.714	75.4	76.072	0.12545					40	18	3	0	0	0	0.20789	1	7023	7023		29.15	2.4566	1	206740			5534	11397	3819	3824	6173	6173					0.07676557808372309
EAPAPALPPTG	11	Unmodified	_EAPAPALPPTG_					0	0	0		ENSG00000158050|ENST00000288943|DUSP2	ENSG00000158050|ENST00000288943|DUSP2	ENSG00000158050|ENST00000288943|DUSP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.771728515625	2	510.771657	1019.52876	-0.64993	-0.00033197	0.63389	0.00032377	-0.016045	-8.1952E-06	510.77187525321716	71.61	0.5751	71.651	71.424	71.999	0.040222					48	23	3	0	0	0	0.60058	1	6857	6857		44.377	7.9304	1	203960			5535	5458	3820	3825	6174	6174					0.019777502063334396
EAPGRLWLE	9	Unmodified	_EAPGRLWLE_					0	0	0		ENSG00000039650|ENST00000322344|PNKP	ENSG00000039650|ENST00000322344|PNKP	ENSG00000039650|ENST00000322344|PNKP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7872924804688	2	535.785099	1069.55564	0.13474	7.2191E-05	3.6882	0.0019761	3.823	0.0020483	535.7869150542037	77.548	2.4284	77.954	77.388	79.816	0.40531					160	57	4	0	0	0	0.55097	1	8951	8951		49.442	1.7842	1	5446200			5536	926	3821	3826	6175	6175					0.023648588175319674
EAPLHGGLPVA	11	Unmodified	_EAPLHGGLPVA_					0	0	0			REV__ENST00000600795.1_1_11:77884868-77885513:+|nuORF	REV__ENST00000600795.1_1_11:77884868-77885513:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.5165405273438	2	530.792924	1059.57129	1.3984	0.00074226	-1.1765	-0.00062445	0.22195	0.00011781	530.7923393547889	36.445	0.61829	36.885	36.745	37.363	0.44043					19	14	2	0	0	0	0.17404	1	2890	2890		20.947	0	1	82888	+		5537	29313	3822	3827	6176	6176					0.04389145334562272
EAPRALIRG	9	Unmodified	_EAPRALIRG_					0	0	0			REV__ENST00000255078.7_1_11:68707195-68707240:+|nuORF	REV__ENST00000255078.7_1_11:68707195-68707240:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7947692871094	2	491.793258	981.571963	0.2769	0.00013618	3.964	0.0019495	4.2409	0.0020856	491.79514627400846	43.393	1.1043	43.45	42.905	44.01	0.056744					45	26	2	0	0	0	0.78536	1	2981	2981		29.15	1.2673	1	192480	+		5538	24316	3823	3828	6177	6177					0.08043984774269575
EAPVFKSN	8	Unmodified	_EAPVFKSN_					0	0	0			REV__nc|ENSG00000067369|Q12888|TP53BP1;REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	446.2314758300781	2	446.232168	890.449782	-0.14666	-6.5446E-05	-0.91184	-0.00040689	-1.0585	-0.00047234	446.2316665805217	103.94	1.9863	103.93	103.31	105.29	-0.0035706					126	47	4	0	0	0	0.8621	1	11196	11196		26.693	3.6504	1	2023800	+		5539	16542;28939	3824	3829	6178	6178					0.00017522972052574914
EAPVFKSN	8	Unmodified	_EAPVFKSN_					0	0	0			REV__nc|ENSG00000067369|Q12888|TP53BP1;REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	446.2315979003906	2	446.232168	890.449782	2.7456	0.0012252	-3.7394	-0.0016687	-0.9938	-0.00044346	446.230433871853	103.85	2.0641	103.81	103.12	105.18	-0.043755					129	49	4	0	0	0	0.88185	1	11391	11391		32.812	2.3088	1	1867400	+		5540	16542;28939	3824	3829	6179	6179					0.00017522972052574914
EAPVLFEF	8	Unmodified	_EAPVLFEF_					0	0	0			REV__nc|ENSG00000092929|Q70J99-3|UNC13D	REV__nc|ENSG00000092929|Q70J99-3|UNC13D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.24542236328125	2	476.244744	950.474934	-0.65424	-0.00031158	-3.2541	-0.0015497	-3.9083	-0.0018613	476.2431785276278	35.429	0.79068	35.373	35.089	35.879	-0.055901					37	17	3	0	0	0	0.92973	1	2276	2276		50.025	0.58299	1	188550	+		5541	17040	3825	3830	6180	6180					-0.0022842222537065027
EAQAKYLMGLN	11	Unmodified	_EAQAKYLMGLN_					0	0	0		ENST00000421020.1_1_1:170486790-170487610:-|nuORF	ENST00000421020.1_1_1:170486790-170487610:-|nuORF	ENST00000421020.1_1_1:170486790-170487610:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.3187866210938	2	619.315906	1236.61726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.807	1	75.895	75.395	76.395	0.087631								0	0	0	0.56276	1	7037	7037		26.063	4.1035	1				5542	11459	3826	3831	6181	6181					0.008414224545049365
EAQGNTIQDAP	11	Unmodified	_EAQGNTIQDAP_					0	0	0		nc|ENSG00000178222|Q495C1-6|RNF212;nc|ENSG00000178222|Q495C1-4|RNF212	nc|ENSG00000178222|Q495C1-6|RNF212	nc|ENSG00000178222|Q495C1-6|RNF212	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.2684326171875	2	572.267467	1142.52038	-0.40078	-0.00022935	3.3656	0.001926	2.9648	0.0016967	572.2691607726102	59.355	0.59389	59.388	59.135	59.729	0.03318					23	13	2	0	0	0	0.62914	1	5486	5486		41.08	1.0219	1	163350			5543	15122	3827	3832	6182	6182					-0.04517848500927357
EAQKKAVTQP	10	Unmodified	_EAQKKAVTQP_					0	0	0			REV__ENSG00000196440|ENST00000423738|ARMCX4	REV__ENSG00000196440|ENST00000423738|ARMCX4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3088989257812	2	550.308938	1098.60332	-1.3837	-0.00076145	1.4645	0.00080594	0.080854	4.4495E-05	550.3096185599048	31.41	0.90482	31.49	31.121	32.026	0.079834					52	20	4	0	0	0	0.16557	2	2121	2109;2121		93.143	5.3889	1	1494500	+		5544	23132	3828	3833	6183;6184	6184					0.05796513017708094
EAQKKAVTQP	10	Unmodified	_EAQKKAVTQP_					0	0	0			REV__ENSG00000196440|ENST00000423738|ARMCX4	REV__ENSG00000196440|ENST00000423738|ARMCX4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3086547851562	2	550.308938	1098.60332	0.22784	0.00012538	-0.30799	-0.00016949	-0.080147	-4.4105E-05	550.3087229601335	31.292	1.3765	31.296	30.71	32.086	0.0037193					63	31	4	0	0	0	0.2575	3	2126	2116;2126;2139		77.318	5.3864	1	1781500	+		5545	23132	3828	3833	6185;6186;6187	6186					0.05796513017708094
EAQKKAVTQP	10	Unmodified	_EAQKKAVTQP_					0	0	0			REV__ENSG00000196440|ENST00000423738|ARMCX4	REV__ENSG00000196440|ENST00000423738|ARMCX4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	550.308938	1098.60332	-1.3837	-0.00076145	1.4645	0.00080594	0.080854	4.4495E-05	550.3096185599048	31.41	0.90482	31.49	31.121	32.026	0.079834	0.097041	0.00081097	NaN	93.143	52	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1494500	+		5546	23132	3828	3833							0.05796513017708094
EAQLDKPL	8	Unmodified	_EAQLDKPL_					0	0	0			REV__ENST00000379707.7_1_9:33255219-33262163:-|nuORF	REV__ENST00000379707.7_1_9:33255219-33262163:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2526550292969	2	457.2531	912.491647	0.39374	0.00018004	-0.058535	-2.6765E-05	0.3352	0.00015327	457.25287569992605	31.678	1.0685	31.785	31.377	32.446	0.10707					47	24	3	0	0	0	0.93786	1	2204	2204		53.351	2.016	1	574200	+		5547	17651	3829	3834	6188	6188					0.031900786605774556
EAQLRGLLA	9	Unmodified	_EAQLRGLLA_					0	0	0			REV__ENSG00000182253|ENST00000336292|SYNM	REV__ENSG00000182253|ENST00000336292|SYNM	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.7806396484375	2	485.787641	969.56073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.842	1	15.9	15.4	16.4	0.057872								0	0	0	0.3041	1	82	82		29.17	3.596	1		+		5548	22511	3830	3835	6189	6189					0.07473162680139467
EARAARPLG	9	Unmodified	_EARAARPLG_					0	0	0		ENST00000592120.5_2_16:4897963-4898116:+|nuORF	ENST00000592120.5_2_16:4897963-4898116:+|nuORF	ENST00000592120.5_2_16:4897963-4898116:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.768310546875	2	470.769783	939.525013	-0.48992	-0.00023064	-1.8607	-0.00087595	-2.3506	-0.0011066	470.7688881667738	48.682	1.1232	49.586	49.29	50.413	0.90424					66	27	4	0	0	0	0.69624	1	4741	4741		40.778	0	1	20692000			5549	14285	3831	3836	6190	6190					0.05283125223127172
EARAARPLG	9	Unmodified	_EARAARPLG_					0	0	0		ENST00000592120.5_2_16:4897963-4898116:+|nuORF	ENST00000592120.5_2_16:4897963-4898116:+|nuORF	ENST00000592120.5_2_16:4897963-4898116:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7691345214844	2	470.769783	939.525013	0.24256	0.00011419	-1.7466	-0.00082224	-1.504	-0.00070805	470.7687464868604	50.117	1.1073	50.962	50.641	51.748	0.84501					94	26	5	0	0	0	0.58668	1	5048	5048		47.657	3.2801	1	10800000			5550	14285	3831	3836	6191	6191					0.05283125223127172
EAREGGHG	8	Unmodified	_EAREGGHG_					0	0	0		ENST00000373053.7_2_10:74647239-74647362:+|nuORF	ENST00000373053.7_2_10:74647239-74647362:+|nuORF	ENST00000373053.7_2_10:74647239-74647362:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.68798828125	2	406.685916	811.357279	2.7533	0.0011197	2.1364	0.00086886	4.8898	0.0019886	406.6868857776059	28.706	1.001	28.686	28.167	29.168	-0.019407					47	28	2	0	0	0	0.87922	1	1387	1387		31.955	2.1133	1	76555			5551	10724	3832	3837	6192	6192					-0.05594562041460449
EARGRRVR	8	Unmodified	_EARGRRVR_					0	0	0		ENSG00000108387|ENST00000672673|SEPTIN4;ENST00000582270.5_1_17:56598597-56598741:-|nuORF;ENST00000426861.5_1_17:56598198-56599363:-|nuORF;nc|ENSG00000108387|O43236-5|SEPTIN4;nc|ENSG00000108387|O43236-2|SEPTIN4;ENST00000577440.5_1_17:56598198-56609324:-|nuORF;nc|ENSG00000108387|O43236-3|SEPTIN4;nc|ENSG00000108387|O43236|SEPTIN4;nc|ENSG00000108387|O43236-4|SEPTIN4;ENST00000584488.5_1_17:56598198-56606616:-|nuORF	ENSG00000108387|ENST00000672673|SEPTIN4	ENSG00000108387|ENST00000672673|SEPTIN4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.73291015625	2	500.299573	998.584593	-1.5947	-0.00079782	2.5615	0.0012815	0.96685	0.00048371	500.801830002818	30.49	0.53111	30.519	30.274	30.805	0.028618					12	11	2	0	0	0	0.4196	1	2023	2023		18.324	0.95945	1	25452			5552	2403	3833	3838	6193	6193					0.08524440957171464
EARLTPCPAI	10	Unmodified	_EARLTPCPAI_					0	0	0		ENST00000473160.6_1_19:35622134-35624715:-|nuORF;nc|ENSG00000153902|Q8N135-2|LGI4	ENST00000473160.6_1_19:35622134-35624715:-|nuORF	ENST00000473160.6_1_19:35622134-35624715:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7872924804688	2	535.786784	1069.55902	0.13474	7.2191E-05	0.54254	0.00029068	0.67728	0.00036288	535.7869150542037	77.548	2.4284	77.954	77.388	79.816	0.40531					160	57	4	0	0	0	0.73395	1	8927	8927		42.864	2.2917	1	5446200			5553	12276	3834	3839	6194	6194					0.02701785599856521
EARLVQGSILK	11	Unmodified	_EARLVQGSILK_					0	0	0		ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.2489318847656	3	405.24695	1212.71902	1.65	0.00066868	-1.1207	-0.00045416	0.52934	0.00021451	405.24639893952656	23.489	3.066	23.108	22.404	25.47	-0.38178					149	70	4	0	0	0	0.68177	1	1129	1129		34.501	1.7504	1	247320			5554	3814	3835	3840	6195	6195					0.12117036868539799
EARLVQGSILK	11	Unmodified	_EARLVQGSILK_					0	0	0		ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.2467956542969	3	405.24695	1212.71902	1.0635	0.00043097	-0.64433	-0.00026111	0.41915	0.00016986	405.2465768037405	23.434	2.4302	22.86	22.409	24.839	-0.57415					118	56	3	0	0	0	0.42858	2	1078	1078;1092		57.149	13.498	1	383090			5555	3814	3835	3840	6196;6197	6196					0.12117036868539799
EARNDPIPIAL	11	Unmodified	_EARNDPIPIAL_					0	0	0			REV__ENSG00000144452|ENST00000272895|ABCA12	REV__ENSG00000144452|ENST00000272895|ABCA12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.56011962890625	3	403.559305	1207.65609	2.8514	0.0011507	-1.0389	-0.00041924	1.8125	0.00073146	403.5587881215693	22.775	1.0826	22.725	22.354	23.437	-0.050077					94	41	3	0	0	0	0.71207	1	719	719		29.551	0.38069	1	140620	+		5556	19890	3836	3841	6198	6198					0.060564710805238064
EASGPAASAPV	11	Unmodified	_EASGPAASAPV_					0	0	0		ENST00000303746.9_1_16:3013978-3014224:+|nuORF	ENST00000303746.9_1_16:3013978-3014224:+|nuORF	ENST00000303746.9_1_16:3013978-3014224:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.7361755371094	2	478.737814	955.461075	-0.90022	-0.00043097	-2.4353	-0.0011659	-3.3356	-0.0015969	478.73679947267	78.748	1.2743	79.311	78.91	80.184	0.56332					63	29	3	0	0	0	0.70737	1	9062	9062		30.318	0	1	1068100			5557	9838	3837	3842	6199	6199					-0.018436997244748454
EASKYIMQY	9	Unmodified	_EASKYIMQY_					0	0	0		ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	566.7713012695312	2	566.7708	1131.52705	-1.1484	-0.00065086	1.2139	0.00068798	0.065503	3.7125E-05	566.7713908970901	53.582	0.90408	53.577	53.244	54.148	-0.0053711					47	22	4	0	0	0	0.41566	1	4730	4730		56.721	0	1	1151400			5558	7093	3838	3843	6200	6200					-0.0334562687394282
EASKYIMQY	9	Oxidation (M)	_EASKYIM(Oxidation (M))QY_		EASKYIM(1)QY		EASKYIM(70)QY	0	0	1		ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.7672729492188	2	574.768257	1147.52196	-0.52162	-0.00029981	0.04812	2.7658E-05	-0.4735	-0.00027215	574.7682046946875	49.221	2.3014	49.197	47.906	50.207	-0.024029					95	52	2	0	0	0	0.24527	1	4195	4195		69.628	7.5202	1	267810			5559	7093	3838	3844	6201	6201		122			-0.04589930736574388
EASLCKSK	8	Unmodified	_EASLCKSK_					0	0	0		nc|ENSG00000133863|Q9BXT5|TEX15;ENSG00000133863|ENST00000643185|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.1960754394531	2	433.226028	864.437503	0.41457	0.0001796	2.2762	0.00098612	2.6908	0.0011657	433.2266627122426	24.257	0.62588	23.875	23.75	24.376	-0.38178					15	13	2	0	0	0	0.4196	1	1140	1140		44.117	17.424	1	129850			5560	3897	3839	3845	6202	6202					-0.0001383676263913003
EASPLVLL	8	Unmodified	_EASPLVLL_					0	0	0		ENST00000606019.5_1_7:96275054-96276828:-|nuORF	ENST00000606019.5_1_7:96275054-96276828:-|nuORF	ENST00000606019.5_1_7:96275054-96276828:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.254150390625	2	421.255111	840.49567	-1.773	-0.00074688	-0.90379	-0.00038073	-2.6768	-0.0011276	421.25456874716457	84.085	1.5006	84.252	83.669	85.17	0.16721					78	34	3	0	0	0	0.87276	1	8210	8210		29.842	1.5873	1	757090			5561	14441	3840	3846	6203	6203					0.06904168154278523
EASPVKRPRLL	11	Unmodified	_EASPVKRPRLL_					0	0	0		ENSG00000156639|ENST00000287218|ZFAND3	ENSG00000156639|ENST00000287218|ZFAND3	ENSG00000156639|ENST00000287218|ZFAND3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.3862915039062	2	633.388054	1264.76155	-0.16034	-0.00010155	-4.169	-0.0026406	-4.3293	-0.0027421	633.3853861154565	57.138	1.3537	57.109	56.711	58.065	-0.02866					59	39	2	0	0	0	0.75121	1	5245	5245		12.812	3.1061	1	143780			5562	5386	3841	3847	6204	6204					0.13976431996798055
EASQLSEGL	9	Unmodified	_EASQLSEGL_					0	0	0			REV__nc|ENSG00000112984|O95235-2|KIF20A	REV__nc|ENSG00000112984|O95235-2|KIF20A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.229736328125	2	467.229822	932.445091	-0.068521	-3.2015E-05	0.36663	0.0001713	0.2981	0.00013928	467.2298152633158	24.377	0.99719	24.334	23.879	24.876	-0.043221					49	22	3	0	0	0	0.18601	1	900	900		76.774	12.567	1	314120	+		5563	17973	3842	3848	6205	6205					-0.023834059613704994
EASTMQHV	8	Unmodified	_EASTMQHV_					0	0	0			REV__ENSG00000198104|ENST00000641644|OR2T6	REV__ENSG00000198104|ENST00000641644|OR2T6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7049255371094	2	451.70546	901.396366	0.64068	0.0002894	-3.9078	-0.0017652	-3.2671	-0.0014758	451.7034112282585	30.799	0.6497	30.788	30.443	31.093	-0.010656					35	16	3	0	0	0	0.91977	1	1644	1644		45.952	0	1	46764	+		5564	23300	3843	3849	6206	6206					-0.058275978021242736
EATGTSPSPL	10	Unmodified	_EATGTSPSPL_					0	0	0		ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-11|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2387390136719	2	480.237647	958.460741	0.33199	0.00015943	-0.6108	-0.00029333	-0.27881	-0.00013389	480.23727660675127	52.385	0.82967	52.809	52.596	53.426	0.42348					35	19	2	0	0	0	0.344	1	5250	5250		68.787	0.30212	1	955710			5565	4207	3844	3850	6207	6207					-0.020151194443315035
EATKKKLKD	9	Unmodified	_EATKKKLKD_					0	0	0			REV__nc|ENSG00000142609|Q9C0B2-2|CFAP74	REV__nc|ENSG00000142609|Q9C0B2-2|CFAP74	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.821044921875	2	530.821681	1059.62881	-0.07706	-4.0905E-05	0.081983	4.3518E-05	0.0049226	2.613E-06	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.7932	1	7604	7604		26.693	1.1189	1	1032800	+		5566	19746	3845	3851	6208	6208					0.10137987540133508
EATKKKLKD	9	Unmodified	_EATKKKLKD_					0	0	0			REV__nc|ENSG00000142609|Q9C0B2-2|CFAP74	REV__nc|ENSG00000142609|Q9C0B2-2|CFAP74	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8206176757812	2	530.821681	1059.62881	-1.2397	-0.00065807	-0.29687	-0.00015758	-1.5366	-0.00081565	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.64555	1	7624	7624		44.377	5.571	1	869100	+		5567	19746	3845	3851	6209	6209					0.10137987540133508
EATKVFQAGP	10	Unmodified	_EATKVFQAGP_					0	0	0		ENST00000488498.2_1_1:156375026-156375068:-|nuORF	ENST00000488498.2_1_1:156375026-156375068:-|nuORF	ENST00000488498.2_1_1:156375026-156375068:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.275390625	2	524.277106	1046.53966	2.7827	0.0014589	-3.2687	-0.0017137	-0.48603	-0.00025482	524.2754281662812	25.682	3.5829	25.251	24.138	27.721	-0.4311					230	81	7	0	0	0	0.6116	1	1270	1270		49.442	1.7842	1	23207000			5568	12629	3846	3852	6210	6210					0.018251525806363134
EATLITGMS	9	Unmodified	_EATLITGMS_					0	0	0		nc|ENSG00000101187|Q96BD0-3|SLCO4A1;nc|ENSG00000101187|Q96BD0-4|SLCO4A1;ENSG00000101187|ENST00000217159|SLCO4A1	nc|ENSG00000101187|Q96BD0-3|SLCO4A1	nc|ENSG00000101187|Q96BD0-3|SLCO4A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.54052734375	2	461.731143	921.447733	-0.90458	-0.00041767	-1.4131	-0.00065249	-2.3177	-0.0010702	461.72939619460266	38.452	0.19905	38.794	38.697	38.896	0.34187					6	4	2	0	0	0	0.20789	1	3160	3160		10.866	0.6003	1	28945			5569	1905	3847	3853	6211	6211					-0.016132738280589365
EATPVHPLKKR	11	Unmodified	_EATPVHPLKKR_					0	0	0		nc|ENSG00000117560|P48023-2|FASLG	nc|ENSG00000117560|P48023-2|FASLG	nc|ENSG00000117560|P48023-2|FASLG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.9225158691406	3	425.922578	1274.7459	0.68256	0.00029072	-0.56848	-0.00024213	0.11408	4.8588E-05	425.92224890220484	31.754	0.81236	31.861	31.548	32.36	0.10707					59	18	5	0	0	0	0.39037	1	2191	2191		60.167	0	1	1255900			5570	14864	3848	3854	6212	6212					0.11952145479745013
EATSPVNAIY	10	Unmodified	_EATSPVNAIY_					0	0	0		nc|ENSG00000163531|O94856-4|NFASC;nc|ENSG00000163531|O94856-12|NFASC;nc|ENSG00000163531|O94856-10|NFASC;nc|ENSG00000163531|O94856-3|NFASC;nc|ENSG00000163531|O94856-8|NFASC;nc|ENSG00000163531|O94856-11|NFASC;nc|ENSG00000163531|O94856-6|NFASC;ENSG00000163531|ENST00000339876|NFASC;nc|ENSG00000163531|O94856-7|NFASC;nc|ENSG00000163531|O94856-13|NFASC;nc|ENSG00000163531|O94856-5|NFASC;nc|ENSG00000163531|O94856|NFASC;ENST00000495396.5_1_1:204956439-204985664:+|nuORF	nc|ENSG00000163531|O94856-4|NFASC	nc|ENSG00000163531|O94856-4|NFASC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.8021240234375	2	532.766571	1063.51859	0.86139	0.00045892	-1.1676	-0.00062203	-0.30616	-0.00016311	532.7663974387266	34.849	0.55157	35.059	34.769	35.321	0.21003					32	13	4	0	0	0	0.37624	1	2585	2585		52.937	8.8199	1	294130			5571	5817	3849	3855	6213	6213					-0.010628575189002731
EAVDWLYDL	9	Unmodified	_EAVDWLYDL_					0	0	0		nc|ENSG00000024526|Q5TB30-2|DEPDC1;chr1:68481612-68483950|63|143.13|0.32|8.79|-|ENST00000370966|DEPDC1,DEPDC1;ENSG00000024526|ENST00000456315|DEPDC1	nc|ENSG00000024526|Q5TB30-2|DEPDC1	nc|ENSG00000024526|Q5TB30-2|DEPDC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.3059692382812	2	562.268947	1122.52334	0.28501	0.00016025	3.3088	0.0018604	3.5938	0.0020207	562.2710982630559	84.112	0.64921	84.563	84.185	84.835	0.45085					24	15	2	0	0	0	0.20789	1	9826	9826		34.173	0	1	86829			5572	55	3850	3856	6214	6214					-0.03301973376164824
EAVGQLLKTY	10	Unmodified	_EAVGQLLKTY_					0	0	0			REV__ENSG00000162852|ENST00000366513|CNST	REV__ENSG00000162852|ENST00000366513|CNST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3101806640625	2	561.313689	1120.61282	0.64954	0.00036459	-3.5472	-0.0019911	-2.8976	-0.0016265	561.3111530718345	55.875	0.60942	56.276	55.866	56.475	0.40102					24	15	2	0	0	0	0.67571	2	5702	5702;5720		45.972	4.5456	1	1178600	+		5573	20856	3851	3857	6215;6216	6215					0.05734281303261923
EAVKEEEE	8	Unmodified	_EAVKEEEE_					0	0	0			REV__chr2:202300813-202302921|18|151.11|0.53|8.15|+|2|None,NOP58|2	REV__chr2:202300813-202302921|18|151.11|0.53|8.15|+|2|None,NOP58|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.7206726074219	2	481.719287	961.424021	-0.27476	-0.00013236	1.8845	0.00090779	1.6097	0.00077543	481.72015082092094	23.182	0.44224	23.13	22.973	23.415	-0.052114					20	14	2	0	0	0	0.87922	1	809	809		31.955	0	1	28005	+		5574	15749	3852	3858	6217	6217					-0.05823416060900399
EAVKKVNR	8	Unmodified	_EAVKKVNR_					0	0	0		ENSG00000166866|ENST00000300119|MYO1A	ENSG00000166866|ENST00000300119|MYO1A	ENSG00000166866|ENST00000300119|MYO1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2877197265625	2	472.287808	942.561064	-0.024015	-1.1342E-05	0.7135	0.00033698	0.68949	0.00032564	472.2881848861931	99.149	1.6194	99.196	98.809	100.43	0.047531					85	37	3	0	0	0	0.9295	1	10615	10615		55.504	2.5675	1	514560			5575	6239	3853	3859	6218	6218					0.0874858239999412
EAVKQYSSY	9	Unmodified	_EAVKQYSSY_					0	0	0		nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3	nc|ENSG00000170525|Q16875-3|PFKFB3	nc|ENSG00000170525|Q16875-3|PFKFB3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	537.7587280273438	2	537.758746	1073.50294	-1.5189	-0.0008168	1.6486	0.00088654	0.12969	6.9741E-05	537.7594798625871	34.479	0.69151	34.479	34.248	34.939	0					43	17	4	0	0	0	0.021781	3	1856	1846;1856;1866		124.08	19.253	1	406800			5576	6598	3854	3860	6219;6220;6221	6220					-0.03087144035930578
EAVKQYSSY	9	Unmodified	_EAVKQYSSY_					0	0	0		nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3	nc|ENSG00000170525|Q16875-3|PFKFB3	nc|ENSG00000170525|Q16875-3|PFKFB3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	537.758746	1073.50294	0.38958	0.0002095	-0.15547	-8.3604E-05	0.23411	0.0001259	537.7586500905418	34.456	0.37254	34.666	34.482	34.854	0.21003	0.032202	-0.0017618	NaN	124.08	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	335690			5577	6598	3854	3860							-0.03087144035930578
EAVKQYSSY	9	Unmodified	_EAVKQYSSY_					0	0	0		nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3	nc|ENSG00000170525|Q16875-3|PFKFB3	nc|ENSG00000170525|Q16875-3|PFKFB3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	537.758746	1073.50294	0.74215	0.0003991	2.2281	0.0011982	2.9703	0.0015973	537.7587083804627	34.452	0.45084	34.757	34.571	35.022	0.30495	0.12323	0.00080177	NaN	124.08	31	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	318930			5578	6598	3854	3860							-0.03087144035930578
EAVVTALNFS	10	Unmodified	_EAVVTALNFS_					0	0	0			REV__nc|ENSG00000101773|Q99708-2|RBBP8	REV__nc|ENSG00000101773|Q99708-2|RBBP8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7770385742188	2	525.776939	1049.53933	-0.31107	-0.00016355	-0.62568	-0.00032897	-0.93675	-0.00049252	525.7764421050882	60.483	0.82246	61.036	60.502	61.325	0.55323					32	17	2	0	0	0	0.73395	1	6410	6410		42.864	6.4175	1	829740	+		5579	17302	3855	3861	6222	6222					0.016537328607682866
EAWKFHLY	8	Unmodified	_EAWKFHLY_					0	0	0		ENST00000467666.2_1_1:85961913-86042365:-|nuORF	ENST00000467666.2_1_1:85961913-86042365:-|nuORF	ENST00000467666.2_1_1:85961913-86042365:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.2804565429688	2	547.276909	1092.53927	0.86735	0.00047468	4.3104	0.002359	5.1777	0.0028336	547.2790276989027	27.014	1.0456	26.987	26.557	27.602	-0.027706					52	25	3	0	0	0	0.89962	1	1215	1215		38.806	4.8845	1	173050			5580	12161	3856	3862	6223	6223					-0.0033022234858890442
EAYPDHTQF	9	Unmodified	_EAYPDHTQF_					0	0	0		nc|ENSG00000151500|Q9P016-2|THYN1;ENST00000533975.1_1_11:134119036-134122923:-|nuORF;ENSG00000151500|ENST00000341541|THYN1	nc|ENSG00000151500|Q9P016-2|THYN1	nc|ENSG00000151500|Q9P016-2|THYN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.2406616210938	2	554.240721	1106.46689	-1.9384	-0.0010743	1.2225	0.00067757	-0.71589	-0.00039678	554.241304360444	43.043	1.0114	43.817	43.291	44.303	0.7738					54	24	4	0	0	0	0.28163	1	3881	3881		66.429	0	1	1252200			5581	5122	3857	3863	6224	6224					-0.08208601212800204
ECANFIRVLQ	10	Carbamidomethyl (C)	_EC(Carbamidomethyl (C))ANFIRVLQ_	EC(1)ANFIRVLQ		EC(77)ANFIRVLQ		0	1	0		chr7:85050750-85055717|20|10.9|0.37|4.89|-|ENST00000444867|SEMA3D,SEMA3D;ENSG00000153993|ENST00000284136|SEMA3D	chr7:85050750-85055717|20|10.9|0.37|4.89|-|ENST00000444867|SEMA3D,SEMA3D	chr7:85050750-85055717|20|10.9|0.37|4.89|-|ENST00000444867|SEMA3D,SEMA3D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	625.3195190429688	2	625.321522	1248.62849	0.59733	0.00037352	-2.9275	-0.0018306	-2.3301	-0.0014571	625.3195366547585	64.365	0.91222	64.489	64.125	65.038	0.12397					75	31	3	0	0	0	0.2575	1	5685	5685		77.318	17.199	1	317080			5582	507	3858	3864	6225	6225	3				0.014122445486236757
ECCHLLVTGVW	11	Unmodified	_ECCHLLVTGVW_					0	0	0			REV__ENST00000534491.5_1_11:3114755-3187956:-|nuORF	REV__ENST00000534491.5_1_11:3114755-3187956:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	630.296875	2	630.299201	1258.58385	-0.23568	-0.00014855	-3.5394	-0.0022309	-3.7751	-0.0023794	630.2969318273362	23.876	1.3048	23.827	23.49	24.795	-0.049152					78	30	4	0	0	0	0.73893	1	912	912		24.519	0.99649	1	407500	+		5583	16241	3859	3865	6226	6226					-0.035099025890531266
ECECVQEIA	9	Unmodified	_ECECVQEIA_					0	0	0		nc|ENSG00000100968|Q14934-5|NFATC4;nc|ENSG00000100968|Q14934-13|NFATC4;nc|ENSG00000100968|Q14934-3|NFATC4;nc|ENSG00000100968|Q14934-20|NFATC4;nc|ENSG00000100968|Q14934-7|NFATC4;nc|ENSG00000100968|Q14934-8|NFATC4;nc|ENSG00000100968|Q14934-10|NFATC4;nc|ENSG00000100968|Q14934-23|NFATC4	nc|ENSG00000100968|Q14934-5|NFATC4	nc|ENSG00000100968|Q14934-5|NFATC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2102661132812	2	512.209718	1022.40488	-0.070945	-3.6339E-05	0.87053	0.00044589	0.79958	0.00040955	512.2100468587475	21.296	0.97677	21.231	20.762	21.739	-0.064743					65	36	2	0	0	0	0.48102	1	615	615		52.937	15.778	1	43822			5584	14819	3860	3866	6227	6227					-0.10542411947824348
ECESLFHS	8	Unmodified	_ECESLFHS_					0	0	0		nc|ENSG00000165617|Q9NYF0|DACT1;ENSG00000165617|ENST00000395153|DACT1;chr14:58639262-58640736|38|14.92|0.81|4.21|+|ENST00000541264|DACT1,DACT1	nc|ENSG00000165617|Q9NYF0|DACT1	nc|ENSG00000165617|Q9NYF0|DACT1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.1981201171875	2	476.197467	950.380382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.56	1	115.65	115.15	116.15	0.094063								0	0	0	0.30252	1	12317	12317		19.36	2.655	1				5585	6100	3861	3867	6228	6228					-0.09679304039013914
ECETGDAWPT	10	Unmodified	_ECETGDAWPT_					0	0	0			REV__nc|ENSG00000163638|Q9P2N4-2|ADAMTS9	REV__nc|ENSG00000163638|Q9P2N4-2|ADAMTS9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7185668945312	2	554.716221	1107.41789	0.2226	0.00012348	3.6227	0.0020096	3.8453	0.0021331	554.7181138197201	24.832	0.79422	24.786	24.312	25.107	-0.04598					37	17	3	0	0	0	0.85466	1	972	972		20.947	1.587	1	73033	+		5586	20952	3862	3868	6229	6229					-0.1315225756407017
ECFELEEQY	9	Unmodified	_ECFELEEQY_					0	0	0			REV__nc|ENSG00000133265|Q9NZL4-2|HSPBP1	REV__nc|ENSG00000133265|Q9NZL4-2|HSPBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	595.7451782226562	2	595.239529	1188.46451	0.56957	0.00033903	4.1291	0.0024578	4.6986	0.0027968	595.2418027090868	64.615	0.54326	64.739	64.494	65.038	0.12397					37	16	3	0	0	0	0.78983	1	5740	5740		27.882	4.8398	1	303960	+		5587	19069	3863	3869	6230	6230					-0.12218817732787102
ECFFSGYE	8	Unmodified	_ECFFSGYE_					0	0	0			REV__ENSG00000043591|ENST00000369295|ADRB1	REV__ENSG00000043591|ENST00000369295|ADRB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.18609619140625	2	491.186568	980.358584	-0.081958	-4.0257E-05	-2.0451	-0.0010045	-2.1271	-0.0010448	491.1854436193473	64.538	1.8054	64.538	63.212	65.018	-0.00078583					113	67	2	0	0	0	0.87922	1	6044	6044		31.955	4.0726	1	132810	+		5588	16339	3864	3870	6231	6231					-0.13238108787584224
ECFSCHPE	8	2 Carbamidomethyl (C)	_EC(Carbamidomethyl (C))FSC(Carbamidomethyl (C))HPE_	EC(1)FSC(1)HPE		EC(41)FSC(41)HPE		0	2	0		ENST00000549205.1_1_12:56487270-56487979:+|nuORF;nc|ENSG00000065361|P21860-4|ERBB3;ENSG00000065361|ENST00000267101|ERBB3	ENST00000549205.1_1_12:56487270-56487979:+|nuORF	ENST00000549205.1_1_12:56487270-56487979:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.1912231445312	2	533.191859	1064.36917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.466	1	37.483	36.983	37.983	0.016563								0	0	0	0.30045	1	2149	2149		40.573	20.091	1				5589	1126	3865	3871	6232	6232	15;16				-0.16044449404807892
ECGDPRNISR	10	Unmodified	_ECGDPRNISR_					0	0	0		ENST00000497591.5_1_1:245254417-245254552:+|nuORF	ENST00000497591.5_1_1:245254417-245254552:+|nuORF	ENST00000497591.5_1_1:245254417-245254552:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.771728515625	2	573.769654	1145.52475	-0.87205	-0.00050036	4.0956	0.0023499	3.2235	0.0018496	573.7718634593974	38.027	0.84522	37.999	37.696	38.541	-0.027843					39	19	3	0	0	0	0.76096	1	2564	2564		41.427	0.64845	1	317510			5590	12811	3866	3872	6233	6233					-0.042186625590375115
ECHESIEKN	9	Unmodified	_ECHESIEKN_					0	0	0		ENSG00000101639|ENST00000506447|CEP192	ENSG00000101639|ENST00000506447|CEP192	ENSG00000101639|ENST00000506447|CEP192	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.7385864257812	2	544.737488	1087.46042	0.0032366	1.7631E-06	3.0082	0.0016387	3.0114	0.0016404	544.7392922159555	40.43	0.35206	40.399	40.172	40.524	-0.030991					15	9	2	0	0	0	0.14386	1	2878	2878		84.916	8.7458	1	111650			5591	1953	3867	3873	6234	6234					-0.07980862435806557
ECHPRDSH	8	Unmodified	_ECHPRDSH_					0	0	0		ENSG00000163092|ENST00000409195|XIRP2;nc|ENSG00000163092|A4UGR9-4|XIRP2;nc|ENSG00000163092|A4UGR9-6|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.7059326171875	2	490.703783	979.393012	0.33775	0.00016573	-0.97965	-0.00048072	-0.64191	-0.00031499	490.7029249099642	95.605	0.28516	96.025	95.864	96.149	0.41963					14	6	3	0	0	0	0.4196	1	11500	11500		18.324	0	1	90322			5592	5765	3868	3874	6235	6235					-0.09750847856128075
ECISTVCGILV	11	Unmodified	_ECISTVCGILV_					0	0	0			REV__ENST00000445718.1_1_X:134345908-134349160:+|nuORF	REV__ENST00000445718.1_1_X:134345908-134349160:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.7844848632812	2	568.788135	1135.56172	0.54347	0.00030912	3.5418	0.0020145	4.0852	0.0023236	568.7899913904585	54.638	0.84172	55.206	54.816	55.658	0.56836					37	19	3	0	0	0	0.14847	1	5624	5624		66.429	29.27	1	530740	+		5593	26798	3869	3875	6236	6236					-0.0006412705747607106
ECKDCGKCFSR	11	Unmodified	_ECKDCGKCFSR_					0	0	0		ENSG00000256223|ENST00000248211|ZNF10	ENSG00000256223|ENST00000248211|ZNF10	ENSG00000256223|ENST00000248211|ZNF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	638.2643432617188	2	638.267575	1274.5206	-0.3229	-0.0002061	-2.9339	-0.0018726	-3.2568	-0.0020787	638.265585923924	27.295	0.53932	27.256	26.934	27.473	-0.038525					25	12	3	0	0	0	0.68532	1	1295	1295		33.922	2.3918	1	84318			5594	8894	3870	3876	6237	6237					-0.1056821136862709
ECKNRQPEQL	10	Unmodified	_ECKNRQPEQL_					0	0	0		ENST00000531716.1_1_11:73996688-73997284:-|nuORF	ENST00000531716.1_1_11:73996688-73997284:-|nuORF	ENST00000531716.1_1_11:73996688-73997284:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.802978515625	2	622.806236	1243.59792	-0.30907	-0.00019249	-3.1355	-0.0019528	-3.4446	-0.0021453	622.8041981667604	56.814	0.55558	57.211	56.942	57.498	0.39672					27	12	3	0	0	0	0.47091	1	5883	5883		58.23	3.146	1	635480			5595	13362	3871	3877	6238	6238					-0.014135338364212657
ECKYEVWLTW	10	Unmodified	_ECKYEVWLTW_					0	0	0			REV__ENST00000232564.7_1_3:179137235-179138714:-|nuORF	REV__ENST00000232564.7_1_3:179137235-179138714:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.8815002441406	3	452.88128	1355.62201	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.836	1	18.359	17.859	18.859	-0.47694								0	0	0	0.45132	1	439	439		32.751	4.1738	1		+		5596	24200	3872	3878	6239	6239					-0.04157693402771656
ECKYEVWLTW	10	Unmodified	_ECKYEVWLTW_					0	0	0			REV__ENST00000232564.7_1_3:179137235-179138714:-|nuORF	REV__ENST00000232564.7_1_3:179137235-179138714:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.8814697265625	3	452.88128	1355.62201	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.938	1	18.461	17.961	18.961	-0.47694								0	0	0	0.45132	1	452	452		31.634	7.4025	1		+		5597	24200	3872	3878	6240	6240					-0.04157693402771656
ECLISQLSRGK	11	Unmodified	_ECLISQLSRGK_					0	0	0		ENSG00000078814|ENST00000262873|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	617.3359375	2	617.33463	1232.65471	0.19514	0.00012047	1.002	0.00061858	1.1972	0.00073904	617.3352235507631	79.813	0.76144	80.229	79.913	80.674	0.41621					48	17	4	0	0	0	0.29858	1	9137	9137		74.165	3.3488	1	1902600			5598	1407	3873	3879	6241	6241					0.04768513720091505
ECLMKATEY	9	Carbamidomethyl (C)	_EC(Carbamidomethyl (C))LMKATEY_	EC(1)LMKATEY		EC(62)LMKATEY		0	1	0			REV__ENSG00000067992|ENST00000379162|PDK3	REV__ENSG00000067992|ENST00000379162|PDK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.7517700195312	2	572.754292	1143.49403	-0.15515	-8.8864E-05	0.64769	0.00037097	0.49254	0.0002821	572.7541433842922	51.166	0.5799	51.601	51.326	51.906	0.43505					28	13	3	0	0	0	0.33718	1	5078	5078		62.107	14.192	1	849170	+		5599	16550	3874	3880	6242	6242	220				-0.0719757698830108
ECLPVPETSLN	11	Unmodified	_ECLPVPETSLN_					0	0	0		ENSG00000051341|ENST00000264233|POLQ;nc|ENSG00000051341|O75417-2|POLQ	ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	601.2940673828125	2	601.292096	1200.56964	0.6413	0.00038561	3.0907	0.0018584	3.732	0.002244	601.2933118496663	78.348	0.7178	78.759	78.551	79.269	0.4106					32	16	3	0	0	0	0.37012	1	8964	8964		61.691	17.574	1	435050			5600	999	3875	3881	6243	6243					-0.022622765363394137
ECLQHELQT	9	Unmodified	_ECLQHELQT_					0	0	0		ENSG00000117724|ENST00000366955|CENPF	ENSG00000117724|ENST00000366955|CENPF	ENSG00000117724|ENST00000366955|CENPF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.7542724609375	2	550.755681	1099.49681	-0.73178	-0.00040303	-2.5665	-0.0014135	-3.2983	-0.0018166	550.754177508086	32.402	0.60229	32.529	32.289	32.891	0.12643					29	13	3	0	0	0	0.51592	1	2259	2259		51.193	1.6567	1	442690			5601	2999	3876	3882	6244	6244					-0.0489598553911037
ECMIAGSKEER	11	Unmodified	_ECMIAGSKEER_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.7887573242188	2	626.786655	1251.55876	-0.20431	-0.00012806	0.06048	3.7908E-05	-0.14383	-9.015E-05	626.7864571269039	20.988	0.45596	20.924	20.72	21.176	-0.064743					27	18	2	0	0	0	0.7144	1	579	579		29.17	4.6509	1	35355	+		5602	21390	3877	3883	6245	6245					-0.05696002182276061
ECMIAGSKEER	11	Unmodified	_ECMIAGSKEER_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	626.786655	1251.55876	-0.20431	-0.00012806	0.06048	3.7908E-05	-0.14383	-9.015E-05	626.7864571269039	20.988	0.45596	20.924	20.72	21.176	-0.064743	-0.054226	0.00047908	NaN	29.17	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35355	+		5603	21390	3877	3883							-0.05696002182276061
ECMIAGSKEER	11	Unmodified	_ECMIAGSKEER_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	626.786655	1251.55876	0.65112	0.00040812	-0.83907	-0.00052592	-0.18795	-0.0001178	626.7860521263638	21.096	0.46326	21.032	20.62	21.084	-0.064058	0.054226	-0.00064858	NaN	29.17	23	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37719	+		5604	21390	3877	3883							-0.05696002182276061
ECPIGASH	8	Unmodified	_ECPIGASH_					0	0	0			REV__nc|ENSG00000069020|O15021-2|MAST4	REV__nc|ENSG00000069020|O15021-2|MAST4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.1836242675781	2	407.18162	812.348688	2.5373	0.0010332	1.4352	0.00058439	3.9725	0.0016175	407.1824492627928	98.594	1.3554	98.956	98.525	99.88	0.36136					76	33	4	0	0	0	0.92973	1	11903	11903		50.025	7.5501	1	2813800	+		5605	16574	3878	3884	6246	6246					-0.06499252002311096
ECQGPFYGLK	10	Unmodified	_ECQGPFYGLK_					0	0	0			REV__ENSG00000113593|ENST00000261308|PPWD1	REV__ENSG00000113593|ENST00000261308|PPWD1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	571.2681884765625	2	571.270967	1140.52738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.971	1	56.002	55.502	56.502	0.030838								0	0	0	0.45132	1	5049	5049		28.081	0.19925	1		+		5606	18000	3879	3885	6247	6247					-0.03726207154090844
ECRKTFSLK	9	Unmodified	_ECRKTFSLK_					0	0	0		ENSG00000254004|ENST00000523638|ZNF260	ENSG00000254004|ENST00000523638|ZNF260	ENSG00000254004|ENST00000523638|ZNF260	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.2952270507812	2	556.300059	1110.58556	-0.91182	-0.00050725	-2.2962	-0.0012774	-3.2081	-0.0017847	556.2983390828923	68.987	0.50521	69.014	68.76	69.265	0.02636					37	21	2	0	0	0	0.48102	1	6516	6516		52.937	3.4952	1	110980			5607	8870	3880	3886	6248	6248					0.03469474491203073
ECRLRQIASGI	11	Unmodified	_ECRLRQIASGI_					0	0	0			REV__ENST00000491834.5_1_3:3195556-3195715:-|nuORF	REV__ENST00000491834.5_1_3:3195556-3195715:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	623.8712158203125	2	623.340246	1244.66594	2.9519	0.00184	3.003	0.0018719	5.9549	0.003712	623.3418611770112	104.67	1.0844	104.63	104.32	105.41	-0.04039					43	25	2	0	0	0	0.17574	1	11502	11502		33.922	12.236	1	237870	+		5608	18020	3881	3887	6249	6249					0.053393358142329816
ECSIIPGICET	11	Unmodified	_ECSIIPGICET_					0	0	0		ENSG00000138829|ENST00000262464|FBN2;nc|ENSG00000138829|P35556-2|FBN2	ENSG00000138829|ENST00000262464|FBN2	ENSG00000138829|ENST00000262464|FBN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.7696533203125	2	582.7674	1163.52025	-0.85917	-0.0005007	4.4882	0.0026156	3.629	0.0021149	582.7699033994918	52.338	0.66209	52.351	52.086	52.748	0.012436					33	14	3	0	0	0	0.7342	1	4583	4583		25.574	1.0549	1	167640			5609	4340	3882	3888	6250	6250					-0.05497307816835928
ECTALVYAL	9	Unmodified	_ECTALVYAL_					0	0	0		nc|ENSG00000008710|P98161-2|PKD1	nc|ENSG00000008710|P98161-2|PKD1	nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7493896484375	2	491.749336	981.484119	-0.10812	-5.3166E-05	-0.014588	-7.1734E-06	-0.1227	-6.0339E-05	491.7492063012243	81.789	1.6129	82.288	81.869	83.482	0.49966					113	39	4	0	0	0	0.14115	1	9438	9438		85.359	8.5128	1	9769300			5610	14737	3883	3889	6251	6251					-0.007363969313814778
ECYQFKFKYT	10	Unmodified	_ECYQFKFKYT_					0	0	0		nc|ENSG00000143452|Q86X24-4|HORMAD1;nc|ENSG00000143452|Q86X24-5|HORMAD1;nc|ENSG00000143452|Q86X24-3|HORMAD1;nc|ENSG00000143452|Q86X24-2|HORMAD1;ENSG00000143452|ENST00000361824|HORMAD1	nc|ENSG00000143452|Q86X24-4|HORMAD1	nc|ENSG00000143452|Q86X24-4|HORMAD1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.8813171386719	3	452.88128	1355.62201	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.119	1	18.195	17.695	18.695	0.075441								0	0	0	0.45132	1	253	253		30.569	1.9921	1				5611	4632	3884	3890	6252	6252					-0.04157693402748919
EDAASYVRKVI	11	Unmodified	_EDAASYVRKVI_					0	0	0		nc|ENSG00000108946|P10644-2|PRKAR1A;ENSG00000108946|ENST00000589228|PRKAR1A	nc|ENSG00000108946|P10644-2|PRKAR1A	nc|ENSG00000108946|P10644-2|PRKAR1A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2581787109375	3	417.562827	1249.66665	1.1058	0.00046175	3.0656	0.0012801	4.1714	0.0017418	417.5641941788762	33.565	0.41414	33.87	33.745	34.159	0.30495					13	9	2	0	0	0	0.17521	1	2458	2458		17.167	1.8336	1	63274			5612	2441	3885	3891	6253	6253					0.05180453734942603
EDAATIAVI	9	Unmodified	_EDAATIAVI_					0	0	0			REV__nc|ENSG00000116783|Q59H18-3|TNNI3K	REV__nc|ENSG00000116783|Q59H18-3|TNNI3K	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.74627685546875	2	451.745108	901.475663	0.15669	7.0785E-05	1.8522	0.0008367	2.0088	0.00090749	451.74584001279584	34.375	0.68409	34.484	34.169	34.853	0.10829					52	30	2	0	0	0	0.67235	1	1756	1756		42.474	3.6683	1	197020	+		5613	29797	3886	3892	6254	6254					0.02098372423665751
EDAAVLLV	8	Unmodified	_EDAAVLLV_					0	0	0		ENSG00000198944|ENST00000378693|SOWAHA	ENSG00000198944|ENST00000378693|SOWAHA	ENSG00000198944|ENST00000378693|SOWAHA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.22906494140625	2	415.236919	828.459284	-1.2772	-0.00053032	1.007	0.00041816	-0.27012	-0.00011216	415.23719686878087	41.943	1.3805	42.357	41.647	43.027	0.4139					45	35	2	0	0	0	0.4196	1	3749	3749		25.45	0	1	167540			5614	8376	3887	3893	6255	6255					0.03819291257582336
EDAGQYLH	8	Unmodified	_EDAGQYLH_					0	0	0		nc|ENSG00000173040|Q86UK5-2|EVC2;nc|ENSG00000173040|Q86UK5-3|EVC2;ENSG00000173040|ENST00000344408|EVC2	nc|ENSG00000173040|Q86UK5-2|EVC2	nc|ENSG00000173040|Q86UK5-2|EVC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.7073669433594	2	466.709057	931.40356	-0.40697	-0.00018993	-2.4586	-0.0011475	-2.8656	-0.0013374	466.7078483852913	76.283	0.69756	76.851	76.433	77.131	0.56836					29	18	2	0	0	0	0.85277	1	8687	8687		25.45	0.94616	1	295150			5615	6819	3888	3894	6256	6256					-0.06488541930059455
EDAHLCPTL	9	Unmodified	_EDAHLCPTL_					0	0	0		nc|ENSG00000172367|Q86UT5-5|NHERF4;nc|ENSG00000172367|Q86UT5-4|NHERF4;nc|ENSG00000172367|Q86UT5-3|NHERF4;ENSG00000172367|ENST00000355547|NHERF4;nc|ENSG00000172367|Q86UT5|NHERF4	nc|ENSG00000172367|Q86UT5-5|NHERF4	nc|ENSG00000172367|Q86UT5-5|NHERF4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.7596740722656	2	499.734217	997.453881	-1.5054	-0.00075228	1.0128	0.00050614	-0.49255	-0.00024614	499.7347505591109	47.601	0.41394	48.072	47.896	48.31	0.47101					21	10	3	0	0	0	0.20789	1	4575	4575		20.947	0	1	455460			5616	6766	3889	3895	6257	6257					-0.044947555965336505
EDAKAPQKKHK	11	Unmodified	_EDAKAPQKKHK_					0	0	0		nc|ENSG00000091428|Q8WZA2-2|RAPGEF4;nc|ENSG00000091428|Q8WZA2-5|RAPGEF4;nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;ENSG00000091428|ENST00000397081|RAPGEF4	nc|ENSG00000091428|Q8WZA2-2|RAPGEF4	nc|ENSG00000091428|Q8WZA2-2|RAPGEF4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.356689453125	2	640.359493	1278.70443	-0.024279	-1.5547E-05	-0.77441	-0.0004959	-0.79869	-0.00051145	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.48529	1	10039	10039		52.937	0	1	448130			5617	1676	3890	3896	6258	6258					0.07622964720417258
EDAKAPQKKHK	11	Unmodified	_EDAKAPQKKHK_					0	0	0		nc|ENSG00000091428|Q8WZA2-2|RAPGEF4;nc|ENSG00000091428|Q8WZA2-5|RAPGEF4;nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;ENSG00000091428|ENST00000397081|RAPGEF4	nc|ENSG00000091428|Q8WZA2-2|RAPGEF4	nc|ENSG00000091428|Q8WZA2-2|RAPGEF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.359619140625	2	640.359493	1278.70443	1.5852	0.0010151	-2.6843	-0.0017189	-1.099	-0.00070379	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.62614	1	10457	10457		41.427	9.4718	1	616450			5618	1676	3890	3896	6259	6259					0.07622964720417258
EDALDHLAF	9	Unmodified	_EDALDHLAF_					0	0	0		nc|ENSG00000149380|Q7Z4N8-2|P4HA3;ENST00000525968.1_1_11:73984627-74015361:-|nuORF;ENSG00000149380|ENST00000331597|P4HA3;nc|ENSG00000149380|Q7Z4N8-3|P4HA3	nc|ENSG00000149380|Q7Z4N8-2|P4HA3	nc|ENSG00000149380|Q7Z4N8-2|P4HA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3094482421875	2	515.745639	1029.47673	-0.28255	-0.00014572	1.0602	0.0005468	0.77766	0.00040107	515.7466315312549	59.334	0.2647	59.888	59.733	59.998	0.55323					10	6	2	0	0	0	0.20789	1	6249	6249		12.959	0	1	132920			5619	5021	3891	3897	6260	6260					-0.03683413207409103
EDALDHLAF	9	Unmodified	_EDALDHLAF_					0	0	0		nc|ENSG00000149380|Q7Z4N8-2|P4HA3;ENST00000525968.1_1_11:73984627-74015361:-|nuORF;ENSG00000149380|ENST00000331597|P4HA3;nc|ENSG00000149380|Q7Z4N8-3|P4HA3	nc|ENSG00000149380|Q7Z4N8-2|P4HA3	nc|ENSG00000149380|Q7Z4N8-2|P4HA3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	515.745639	1029.47673	-0.050576	-2.6085E-05	-0.52507	-0.0002708	-0.57564	-0.00029689	515.745127924898	60.017	0.71549	60.003	59.719	60.435	-0.013729	0.070692	-0.00050407	NaN	12.959	41	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	345140			5620	5021	3891	3897							-0.03683413207409103
EDALDHLAF	9	Unmodified	_EDALDHLAF_					0	0	0		nc|ENSG00000149380|Q7Z4N8-2|P4HA3;ENST00000525968.1_1_11:73984627-74015361:-|nuORF;ENSG00000149380|ENST00000331597|P4HA3;nc|ENSG00000149380|Q7Z4N8-3|P4HA3	nc|ENSG00000149380|Q7Z4N8-2|P4HA3	nc|ENSG00000149380|Q7Z4N8-2|P4HA3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	515.745639	1029.47673	0.47926	0.00024718	-0.76099	-0.00039248	-0.28173	-0.0001453	515.7449917205209	59.933	1.2174	59.901	59.53	60.747	-0.031731	-0.031135	-0.00074742	NaN	12.959	51	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	404740			5621	5021	3891	3897							-0.03683413207409103
EDALDHLAF	9	Unmodified	_EDALDHLAF_					0	0	0		nc|ENSG00000149380|Q7Z4N8-2|P4HA3;ENST00000525968.1_1_11:73984627-74015361:-|nuORF;ENSG00000149380|ENST00000331597|P4HA3;nc|ENSG00000149380|Q7Z4N8-3|P4HA3	nc|ENSG00000149380|Q7Z4N8-2|P4HA3	nc|ENSG00000149380|Q7Z4N8-2|P4HA3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	515.745639	1029.47673	-0.98763	-0.00050936	0.77259	0.00039846	-0.21504	-0.00011091	515.7458352231001	59.885	0.71845	59.918	59.558	60.277	0.032822	-0.014667	0.00083445	NaN	12.959	43	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	377050			5622	5021	3891	3897							-0.03683413207409103
EDANVRVAI	9	Unmodified	_EDANVRVAI_					0	0	0		ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7684631347656	2	493.766906	985.519259	-0.42093	-0.00020784	3.2837	0.0016214	2.8628	0.0014136	493.76840325567446	61.46	0.662	62.014	61.723	62.385	0.55386					27	15	2	0	0	0	0.44421	1	6582	6582		54.776	2.4771	1	194280			5623	1155	3892	3898	6261	6261					0.025919819208070294
EDANVRVAI	9	Unmodified	_EDANVRVAI_					0	0	0		ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	493.766906	985.519259	-1.2476	-0.00061604	4.4806	0.0022124	3.233	0.0015963	493.76913660103617	61.566	0.55843	61.954	61.671	62.229	0.38846	-0.029684	0.00019518	NaN	54.776	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	160760			5624	1155	3892	3898							0.025919819208070294
EDARAGHG	8	Unmodified	_EDARAGHG_					0	0	0			REV__ENST00000573042.1_1_16:4303683-4303770:-|nuORF	REV__ENST00000573042.1_1_16:4303683-4303770:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.6879577636719	2	406.685916	811.357279	2.7533	0.0011197	2.1364	0.00086886	4.8898	0.0019886	406.6868857776059	28.706	1.001	28.686	28.167	29.168	-0.019407					47	28	2	0	0	0	0.87922	1	1406	1406		31.955	1.4512	1	76555	+		5625	28956	3893	3899	6262	6262					-0.05594562041460449
EDASEPLID	9	Unmodified	_EDASEPLID_					0	0	0		ENSG00000148481|ENST00000277632|MINDY3	ENSG00000148481|ENST00000277632|MINDY3	ENSG00000148481|ENST00000277632|MINDY3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.9548034667969	2	494.727112	987.439671	0.034678	1.7156E-05	1.5791	0.00078124	1.6138	0.0007984	494.7276447270974	31.033	0.56326	31.036	30.796	31.36	0.0037212					20	12	2	0	0	0	0.20789	1	2057	2057		29.15	0	1	215460			5626	4964	3894	3900	6263	6263					-0.05455129543850035
EDAVKKLKA	9	Unmodified	_EDAVKKLKA_					0	0	0		ENSG00000105245|ENST00000252891|NUMBL	ENSG00000105245|ENST00000252891|NUMBL	ENSG00000105245|ENST00000252891|NUMBL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29058837890625	2	501.303124	1000.5917	1.1667	0.00058487	1.9687	0.00098691	3.1354	0.0015718	501.3042822707138	87.523	0.64854	87.449	86.99	87.638	-0.074005					18	14	2	0	0	0	0.20789	1	9088	9088		26.693	10.22	1	57647			5627	2193	3895	3901	6264	6264					0.09142315994370165
EDAVQILL	8	Unmodified	_EDAVQILL_					0	0	0		ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000371098.6_1_20:57415898-57475007:+|nuORF	ENST00000313949.11_1_20:57415898-57485881:+|nuORF	ENST00000313949.11_1_20:57415898-57485881:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7546691894531	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.86791	1	7932	7932		28.254	2.8041	1	394230			5628	9958	3896	3902	6265	6265					0.04262962803340997
EDCEESCDVKT	11	Unmodified	_EDCEESCDVKT_					0	0	0		ENSG00000187151|ENST00000334289|ANGPTL5	ENSG00000187151|ENST00000334289|ANGPTL5	ENSG00000187151|ENST00000334289|ANGPTL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	629.2300415039062	2	629.234118	1256.45368	0.088896	5.5936E-05	-1.981	-0.0012465	-1.8921	-0.0011905	629.2327803799166	52.674	0.59188	52.691	52.488	53.08	0.017487					22	14	3	0	0	0	0.70584	1	4622	4622		30.569	4.9948	1	136590			5629	7846	3897	3903	6266	6266					-0.164285881693786
EDDATAKFDY	10	Unmodified	_EDDATAKFDY_					0	0	0			REV__ENST00000577711.1_1_17:73389565-73389709:-|nuORF	REV__ENST00000577711.1_1_17:73389565-73389709:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	587.7491455078125	2	587.748576	1173.4826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.055	1	55.029	54.529	55.529	-0.025955								0	0	0	0.45132	1	4994	4994		56.721	7.185	1		+		5630	22234	3898	3904	6267	6267					-0.09720359486436791
EDDDDDGSNDD	11	Unmodified	_EDDDDDGSNDD_					0	0	0			REV__ENST00000366544.5_2_1:243418347-243418491:-|nuORF	REV__ENST00000366544.5_2_1:243418347-243418491:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.1737060546875	2	606.176366	1210.33818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.212	1	33.211	32.711	33.711	-0.0016365								0	0	0	0.56276	1	1940	1940		18.262	10.027	1		+		5631	25526	3899	3905	6268	6268					-0.25857697495007415
EDDDDDGSNDD	11	Unmodified	_EDDDDDGSNDD_					0	0	0			REV__ENST00000366544.5_2_1:243418347-243418491:-|nuORF	REV__ENST00000366544.5_2_1:243418347-243418491:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.1734008789062	2	606.176366	1210.33818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.304	1	33.303	32.803	33.803	-0.0016365								0	0	0	0.56276	1	1952	1952		16.717	3.9057	1		+		5632	25526	3899	3905	6269	6269					-0.25857697495007415
EDDDDDGSNDD	11	Unmodified	_EDDDDDGSNDD_					0	0	0			REV__ENST00000366544.5_2_1:243418347-243418491:-|nuORF	REV__ENST00000366544.5_2_1:243418347-243418491:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.1734619140625	2	606.176366	1210.33818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.349	1	33.348	32.848	33.848	-0.0016365								0	0	0	0.56276	1	1958	1958		20.03	12.226	1		+		5633	25526	3899	3905	6270	6270					-0.25857697495007415
EDDDDDGSNDD	11	Unmodified	_EDDDDDGSNDD_					0	0	0			REV__ENST00000366544.5_2_1:243418347-243418491:-|nuORF	REV__ENST00000366544.5_2_1:243418347-243418491:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.1734619140625	2	606.176366	1210.33818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.486	1	33.486	32.986	33.986	2.6703E-05								0	0	0	0.56276	1	1976	1976		12.207	4.5164	1		+		5634	25526	3899	3905	6271	6271					-0.25857697495007415
EDDERKKRE	9	Unmodified	_EDDERKKRE_					0	0	0			REV__nc|ENSG00000196586|Q9UM54-5|MYO6	REV__nc|ENSG00000196586|Q9UM54-5|MYO6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	602.8006591796875	2	602.799466	1203.58438	0.97328	0.00058669	1.8523	0.0011166	2.8256	0.0017033	602.8004011190249	72.823	0.83628	72.952	72.522	73.358	0.12921					70	29	3	0	0	0	0.69624	1	6672	6672		40.778	2.9666	1	532890	+		5635	23150	3900	3906	6272	6272					-0.009270683439808636
EDDERKKRE	9	Unmodified	_EDDERKKRE_					0	0	0			REV__nc|ENSG00000196586|Q9UM54-5|MYO6	REV__nc|ENSG00000196586|Q9UM54-5|MYO6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	602.8013305664062	2	602.799466	1203.58438	0.65075	0.00039227	2.1463	0.0012938	2.797	0.001686	602.8006043046089	72.774	0.78786	72.904	72.521	73.309	0.13064					71	26	4	0	0	0	0.69624	1	6674	6674		40.778	2.0246	1	436040	+		5636	23150	3900	3906	6273	6273					-0.009270683439808636
EDDLKLFHI	9	Unmodified	_EDDLKLFHI_					0	0	0		ENSG00000095587|ENST00000357947|TLL2	ENSG00000095587|ENST00000357947|TLL2	ENSG00000095587|ENST00000357947|TLL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.2978515625	2	565.298039	1128.58152	-0.42962	-0.00024286	4.1755	0.0023604	3.7459	0.0021176	565.3004501774564	73.658	0.88351	74.046	73.654	74.538	0.3878					35	23	2	0	0	0	0.64555	1	8239	8239		44.377	1.5129	1	529330			5637	1732	3901	3907	6274	6274					0.02237708269126415
EDDNEMSSE	9	Unmodified	_EDDNEMSSE_					0	0	0			REV__nc|ENSG00000163605|Q9NY27-3|PPP4R2	REV__nc|ENSG00000163605|Q9NY27-3|PPP4R2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.4100952148438	2	528.177126	1054.3397	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.866	1	71.866	71.366	72.366	0								0	0	0	0.3307	1	6427	6427		19.997	0.89325	1		+		5638	20941	3902	3908	6275	6275					-0.1852973493994341
EDDSDEGGDD	10	Unmodified	_EDDSDEGGDD_					0	0	0		ENSG00000115267|ENST00000649979|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.5687866210938	2	527.159987	1052.30542	0.22169	0.00011687	-3.9437	-0.002079	-3.722	-0.0019621	527.1577070325235	32.421	1.3231	32.367	31.683	33.006	-0.05434					62	29	3	0	0	0	0.37624	1	1860	1860		20.947	7.1716	1	139490			5639	2827	3903	3909	6276	6276					-0.2186385982720367
EDDSDEGGDD	10	Unmodified	_EDDSDEGGDD_					0	0	0		ENSG00000115267|ENST00000649979|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	527.159987	1052.30542	-0.22186	-0.00011695	-3.8099	-0.0020084	-4.0318	-0.0021254	527.1579218759471	32.35	1.0178	32.402	31.872	32.89	0.05246	0.078664	0.00020568	NaN	20.947	75	50	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71845			5640	2827	3903	3909							-0.2186385982720367
EDDSDEGGDD	10	Unmodified	_EDDSDEGGDD_					0	0	0		ENSG00000115267|ENST00000649979|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	527.159987	1052.30542	0.20988	0.00011064	-3.8346	-0.0020214	-3.6247	-0.0019108	527.1577288822202	32.124	0.97715	32.235	31.75	32.728	0.11117	-0.088715	0.00017969	NaN	20.947	60	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121050			5641	2827	3903	3909							-0.2186385982720367
EDDSGESDEDL	11	Unmodified	_EDDSGESDEDL_					0	0	0			REV__ENSG00000115816|ENST00000234170|CEBPZ	REV__ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.7153930664062	2	605.715127	1209.4157	-0.47666	-0.00028872	1.7291	0.0010474	1.2525	0.00075864	605.7161403227536	28.106	1.4431	28.082	27.514	28.957	-0.023558					74	36	3	0	0	0	0.72918	1	1324	1324		26.693	4.733	1	302860	+		5642	18152	3904	3910	6277	6277					-0.1806305955881271
EDDSGESDEDL	11	Unmodified	_EDDSGESDEDL_					0	0	0			REV__ENSG00000115816|ENST00000234170|CEBPZ	REV__ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	605.715127	1209.4157	-1.2543	-0.00075974	3.1459	0.0019055	1.8916	0.0011458	605.716832161076	28.232	0.46667	28.232	27.946	28.413	0	0.070967	0.0019241	NaN	26.693	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43704	+		5643	18152	3904	3910							-0.1806305955881271
EDDSGESDEDL	11	Unmodified	_EDDSGESDEDL_					0	0	0			REV__ENSG00000115816|ENST00000234170|CEBPZ	REV__ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	605.715127	1209.4157	-0.13124	-7.9492E-05	1.4483	0.00087723	1.317	0.00079774	605.715895085553	28.179	0.53451	28.082	27.84	28.375	-0.096945	-0.079355	-0.00013247	NaN	26.693	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73674	+		5644	18152	3904	3910							-0.1806305955881271
EDDTWVTK	8	Unmodified	_EDDTWVTK_					0	0	0		ENSG00000237765|ENST00000422728|FAM200B	ENSG00000237765|ENST00000422728|FAM200B	ENSG00000237765|ENST00000422728|FAM200B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.7373046875	2	497.229822	992.445091	-0.073287	-3.644E-05	3.6617	0.0018207	3.5884	0.0017843	497.2320604945194	60.121	0.64142	60.107	59.597	60.238	-0.013729					24	16	2	0	0	0	0.4196	1	5478	5478		31.955	5.2619	1	181750			5645	8762	3905	3911	6278	6278					-0.05143405961359804
EDEAVCVNC	9	Unmodified	_EDEAVCVNC_					0	0	0		ENSG00000105429|ENST00000251268|MEGF8;nc|ENSG00000105429|Q7Z7M0-2|MEGF8	ENSG00000105429|ENST00000251268|MEGF8	ENSG00000105429|ENST00000251268|MEGF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.1888732910156	2	491.186242	980.357932	-0.16814	-8.2586E-05	-1.4334	-0.00070408	-1.6016	-0.00078667	491.18544321590446	64.613	1.5883	64.579	63.461	65.049	-0.034256					90	46	2	0	0	0	0.76764	1	6200	6200		34.173	2.2177	1	131650			5646	2217	3906	3912	6279	6279					-0.13303271498944014
EDEDVGSAVK	10	Unmodified	_EDEDVGSAVK_					0	0	0			REV__ENST00000539757.1_1_12:9440801-9462940:+|nuORF	REV__ENST00000539757.1_1_12:9440801-9462940:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.74072265625	2	524.743293	1047.47203	0.86491	0.00045386	-0.049835	-2.6151E-05	0.81508	0.00042771	524.74331637429	25.624	0.89235	25.592	25.164	26.057	-0.032125					47	27	2	0	0	0	0.86218	1	1028	1028		32.812	7.2384	1	45071	+		5647	28454	3907	3913	6280	6280					-0.04980342140856919
EDEENQEAEA	10	Unmodified	_EDEENQEAEA_					0	0	0			REV__ENSG00000120457|ENST00000529694|KCNJ5	REV__ENSG00000120457|ENST00000529694|KCNJ5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3538818359375	2	582.220379	1162.42621	-1.3473	-0.00078443	-2.4807	-0.0014443	-3.828	-0.0022287	582.2186830842472	103.69	0.20242	103.81	103.73	103.93	0.11495					6	4	2	0	0	0	0.37624	1	10907	10907		30.318	0	1	23545	+		5648	18412	3908	3914	6281	6281					-0.1485103211373371
EDEETYSA	8	Unmodified	_EDEETYSA_					0	0	0			REV__ENSG00000046604|ENST00000261590|DSG2	REV__ENSG00000046604|ENST00000261590|DSG2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28741455078125	2	472.179995	942.345436	-1.7056	-0.00080534	3.8228	0.0018051	2.1172	0.00099972	472.1805452389011	95.152	0.20208	95.354	95.191	95.393	0.20241					6	4	2	0	0	0	0.4196	1	9692	9692		33.516	13.034	1	29531	+		5649	16344	3909	3915	6282	6282					-0.12804268365994176
EDEFKIQNI	9	Unmodified	_EDEFKIQNI_					0	0	0			REV__nc|ENSG00000162627|Q9UNH6-2|SNX7	REV__nc|ENSG00000162627|Q9UNH6-2|SNX7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.2855834960938	2	568.285128	1134.5557	0.10141	5.7628E-05	-0.077619	-4.411E-05	0.023788	1.3518E-05	568.2852200834831	56.763	0.44301	56.796	56.634	57.077	0.033184					29	13	3	0	0	0	0.11055	1	5136	5136		90.37	0	1	342000	+		5650	20830	3910	3916	6283	6283					-0.00619185973164349
EDEHLSLTFS	10	Unmodified	_EDEHLSLTFS_					0	0	0			REV__nc|ENSG00000054983|P54803-5|GALC	REV__nc|ENSG00000054983|P54803-5|GALC	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.2723999023438	2	589.272218	1176.52988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.918	1	58.918	58.418	59.418	0								0	0	0	0.45132	1	5117	5117		40.778	11.608	1		+		5651	29694	3911	3917	6284	6284					-0.05132080215412316
EDEITMSEID	10	Unmodified	_EDEITMSEID_					0	0	0			REV__ENST00000527193.1_1_19:46878896-46886865:+|nuORF	REV__ENST00000527193.1_1_19:46878896-46886865:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	591.2464599609375	2	591.247551	1180.48055	0.086262	5.1002E-05	-0.82286	-0.00048652	-0.7366	-0.00043551	591.2465680041223	19.809	0.78075	19.179	18.892	19.673	-0.6296					35	16	3	0	0	0	0.86718	1	576	576		27.882	4.8398	1	246040	+		5652	28223	3912	3918	6285	6285					-0.1024715628652757
EDEKNLFY	8	Unmodified	_EDEKNLFY_					0	0	0			REV__ENSG00000189227|ENST00000342683|C15orf61	REV__ENSG00000189227|ENST00000342683|C15orf61	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.7506103515625	2	529.245472	1056.47639	0.039178	2.0735E-05	2.8422	0.0015042	2.8814	0.001525	529.2469672779198	66.89	0.29681	66.854	66.718	67.015	-0.035698					15	11	2	0	0	0	0.4196	1	6419	6419		71.296	2.5089	1	77235	+		5653	23071	3913	3919	6286	6286					-0.04958832927286494
EDEPPLTLPKP	11	Unmodified	_EDEPPLTLPKP_					0	0	0		ENSG00000124788|ENST00000436367|ATXN1	ENSG00000124788|ENST00000436367|ATXN1	ENSG00000124788|ENST00000436367|ATXN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.17608642578125	3	412.555449	1234.64452	0.32037	0.00013217	0.85976	0.0003547	1.1801	0.00048687	413.22530574241244	95.168	0.31148	95.588	95.393	95.704	0.41964					13	7	3	0	0	0	0.17396	1	11424	11424		45.908	10.73	1	392530			5654	3361	3914	3920	6287	6287					0.036582292665116256
EDEQEAVQ	8	Unmodified	_EDEQEAVQ_					0	0	0		ENSG00000109920|ENST00000263773|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.7572937011719	2	474.201261	946.38797	1.6404	0.00077786	-0.15298	-7.2542E-05	1.4874	0.00070532	474.20101640088683	96.521	0.71208	96.926	96.547	97.259	0.40498					37	16	3	0	0	0	0.4196	1	11521	11521		31.53	1.2121	1	495020			5655	2493	3915	3921	6288	6288					-0.08736873237751297
EDERSSFPRG	10	Unmodified	_EDERSSFPRG_					0	0	0			REV__ENSG00000155970|ENST00000318063|MICU3	REV__ENSG00000155970|ENST00000318063|MICU3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.3096923828125	2	590.273084	1178.53161	-1.7119	-0.0010105	-3.571	-0.0021079	-5.2829	-0.0031184	590.2708294735763	32.33	0.31046	32.324	32.131	32.441	-0.0061455					13	7	2	0	0	0	0.37624	1	1834	1834		30.318	10.958	1	29383	+		5656	20458	3916	3922	6289	6289					-0.05051026406817982
EDEVWLRA	8	Unmodified	_EDEVWLRA_					0	0	0		ENST00000491136.6_1_1:52823963-52826194:-|nuORF	ENST00000491136.6_1_1:52823963-52826194:-|nuORF	ENST00000491136.6_1_1:52823963-52826194:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.25177001953125	2	509.253631	1016.49271	-0.62819	-0.00031991	-2.549	-0.0012981	-3.1772	-0.001618	509.2521981571704	46.031	0.92618	46.503	46.173	47.099	0.47139					56	22	3	0	0	0	0.89494	1	4317	4317		37.159	2.0071	1	1983200			5657	12677	3917	3923	6290	6290					-0.014877069705221402
EDFDQLGGF	9	Unmodified	_EDFDQLGGF_					0	0	0			REV__ENST00000380559.7_1_9:18706652-18908543:+|nuORF	REV__ENST00000380559.7_1_9:18706652-18908543:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.2201538085938	2	514.221997	1026.42944	0.011526	5.9272E-06	-3.9281	-0.0020199	-3.9165	-0.002014	514.219877561838	29.927	1.1615	29.884	29.339	30.501	-0.043095					61	30	3	0	0	0	0.22631	1	1581	1581		71.296	2.5089	1	394770	+		5658	25948	3918	3924	6291	6291					-0.08271692478433579
EDFDQLGGF	9	Unmodified	_EDFDQLGGF_					0	0	0			REV__ENST00000380559.7_1_9:18706652-18908543:+|nuORF	REV__ENST00000380559.7_1_9:18706652-18908543:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	514.221997	1026.42944	-0.41696	-0.00021441	-3.4233	-0.0017603	-3.8403	-0.0019748	514.220108431148	29.981	0.69284	30.047	29.668	30.361	0.066727	0.11383	0.00035054	NaN	71.296	67	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	329530	+		5659	25948	3918	3924							-0.08271692478433579
EDFIESSTDDI	11	Unmodified	_EDFIESSTDDI_					0	0	0			REV__ENSG00000183578|ENST00000637513|TNFAIP8L3	REV__ENSG00000183578|ENST00000637513|TNFAIP8L3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.52520751953125	3	424.182229	1269.52486	0.74179	0.00031466	-1.7305	-0.00073406	-0.98875	-0.00041941	424.1815494010526	24.644	1.4265	24.316	23.804	25.23	-0.32825					73	31	4	0	0	0	0.17551	1	1174	1174		33.039	1.4051	1	1532000	+		5660	22614	3919	3925	6292	6292					-0.09912428868688039
EDFIKIGGF	9	Unmodified	_EDFIKIGGF_					0	0	0			REV__nc|ENSG00000173406|O75553-2|DAB1	REV__nc|ENSG00000173406|O75553-2|DAB1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2823486328125	2	513.26875	1024.52295	1.2558	0.00064457	0.28079	0.00014412	1.5366	0.00078869	513.2689192724771	86.733	1.4934	86.659	85.712	87.206	-0.074005					60	34	2	0	0	0	0.20789	1	8924	8924		17.365	5.8539	1	79604	+		5661	21921	3920	3926	6293	6293					0.011666516946434058
EDFIKYLGP	9	Unmodified	_EDFIKYLGP_					0	0	0			REV__ENSG00000131747|ENST00000423485|TOP2A;REV__ENSG00000077097|ENST00000264331|TOP2B	REV__ENSG00000077097|ENST00000264331|TOP2B	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	541.2820434570312	2	541.281857	1080.54916	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.101	1	54.156	53.656	54.656	0.055614								0	0	0	0.31472	1	4455	4455		25.45	2.4077	1		+		5662	18961;16735	3921	3927	6294	6294					0.012109208661286175
EDGALFSAHI	10	Unmodified	_EDGALFSAHI_					0	0	0			REV__ENST00000512148.5_2_4:110663706-110667416:-|nuORF	REV__ENST00000512148.5_2_4:110663706-110667416:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2610473632812	2	530.258914	1058.50327	0.88643	0.00047004	1.6623	0.00088146	2.5487	0.0013515	530.2597335184702	53.808	0.67089	54.222	53.994	54.665	0.4139					26	15	2	0	0	0	0.43769	1	5472	5472		60.972	0.85368	1	1698200	+		5663	27977	3922	3928	6295	6295					-0.023637243161147126
EDGEEEDEGE	10	Unmodified	_EDGEEEDEGE_					0	0	0		ENSG00000159335|ENST00000309083|PTMS	ENSG00000159335|ENST00000309083|PTMS	ENSG00000159335|ENST00000309083|PTMS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.1900634765625	2	569.188745	1136.36294	-1.0641	-0.00060568	2.4019	0.0013671	1.3378	0.00076146	569.190043865536	34.023	0.95208	34.019	33.502	34.454	-0.0047417					47	22	3	0	0	0	0.86444	1	2020	2020		14.865	3.3539	1	149340			5664	5522	3923	3929	6296	6296					-0.19979017621653838
EDGFFVPPTK	10	Unmodified	_EDGFFVPPTK_					0	0	0		ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	ENSG00000122218|ENST00000241704|COPA	ENSG00000122218|ENST00000241704|COPA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.3344116210938	2	568.784764	1135.55498	0.72747	0.00041377	-3.8354	-0.0021815	-3.1079	-0.0017677	568.7827350843312	52.834	0.2477	53.449	53.324	53.572	0.61436					7	5	2	0	0	0	0.37624	1	5332	5332		61.691	0	1	102290			5665	3214	3924	3930	6297	6297					-0.0073798062219339045
EDGGTFEV	8	Unmodified	_EDGGTFEV_					0	0	0		CON__Q0VCM5	CON__Q0VCM5	CON__Q0VCM5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.1917419433594	2	427.18234	852.350128	-1.8543	-0.00079213	-0.75756	-0.00032362	-2.6119	-0.0011157	427.18188320327437	96.741	0.60892	96.943	96.66	97.269	0.20207					19	13	2	0	0	0	0.4196	1	9904	9904		7.6903	0	1	72539		+	5666	605	3925	3931	6298	6298					-0.08195339432563742
EDGMTVPRQI	10	Unmodified	_EDGMTVPRQI_					0	0	0			REV__nc|ENSG00000071794|Q14527-2|HLTF	REV__nc|ENSG00000071794|Q14527-2|HLTF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.2864379882812	2	573.284605	1144.55466	-0.09489	-5.4399E-05	4.1677	0.0023893	4.0728	0.0023349	573.2870345413025	30.252	1.1402	30.205	29.551	30.692	-0.047064					39	26	3	0	0	0	0.86272	1	1637	1637		24.519	1.4767	1	89668	+		5667	16628	3926	3932	6299	6299					-0.011837236136898355
EDHEEEDD	8	Unmodified	_EDHEEEDD_					0	0	0		ENSG00000205903|ENST00000382252|ZNF316	ENSG00000205903|ENST00000382252|ZNF316	ENSG00000205903|ENST00000382252|ZNF316	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.168701171875	2	509.167615	1016.32068	0.23148	0.00011786	-0.17246	-8.781E-05	0.059023	3.0053E-05	509.16818017990903	53.313	1.6608	53.727	53.128	54.788	0.4139					111	39	5	0	0	0	0.91005	1	5444	5444		42.474	8.3019	1	3249700			5668	8547	3927	3933	6300	6300					-0.1868294823935912
EDHEEEDD	8	Unmodified	_EDHEEEDD_					0	0	0		ENSG00000205903|ENST00000382252|ZNF316	ENSG00000205903|ENST00000382252|ZNF316	ENSG00000205903|ENST00000382252|ZNF316	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	509.167615	1016.32068	0.48894	0.00024895	0.8654	0.00044063	1.3543	0.00068959	509.16807979648974	53.045	1.3729	53.659	53.2	54.573	0.61436	-0.033731	0.00012092	NaN	42.474	92	32	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2981900			5669	8547	3927	3933							-0.1868294823935912
EDHVEVNGE	9	Unmodified	_EDHVEVNGE_					0	0	0		nc|ENSG00000145725|O43314-2|PPIP5K2;ENSG00000145725|ENST00000358359|PPIP5K2	nc|ENSG00000145725|O43314-2|PPIP5K2	nc|ENSG00000145725|O43314-2|PPIP5K2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.2213134765625	2	514.219985	1026.42542	0.011527	5.9272E-06	-0.016571	-8.5212E-06	-0.0050446	-2.5941E-06	514.219877561838	29.927	1.1615	29.884	29.339	30.501	-0.043095					61	30	3	0	0	0	0.76255	1	1570	1570		35.618	0	1	394770			5670	4787	3928	3934	6301	6301					-0.08673781972129291
EDIAFSFI	8	Unmodified	_EDIAFSFI_					0	0	0		ENST00000466041.1_1_7:55495935-55499010:+|nuORF	ENST00000466041.1_1_7:55495935-55499010:+|nuORF	ENST00000466041.1_1_7:55495935-55499010:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2337646484375	2	471.234376	940.454199	-0.88882	-0.00041884	1.0957	0.00051635	0.20691	9.7502E-05	471.2346931184247	73.215	1.0351	73.603	73.043	74.078	0.38779					53	27	3	0	0	0	0.60155	1	8201	8201		71.378	5.4805	1	1012600			5671	12121	3929	3935	6302	6302					-0.018410126050525832
EDIPREMLM	9	Oxidation (M)	_EDIPREMLM(Oxidation (M))_		EDIPREM(0.012)LM(0.988)		EDIPREM(-19)LM(19)	0	0	1		chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1;ENSG00000144711|ENST00000613206|IQSEC1;nc|ENSG00000144711|Q6DN90-2|IQSEC1;nc|ENSG00000144711|Q6DN90|IQSEC1	chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1	chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2679443359375	2	575.267567	1148.52058	-0.2653	-0.00015262	3.2658	0.0018787	3.0005	0.0017261	575.2692112596873	74.127	0.67583	74.686	74.326	75.002	0.55891					42	15	3	0	0	0	0.39367	1	8357	8357		58.23	8.7884	2	632200			5672	389	3930	3936	6303	6303		4			-0.04773888096974588
EDIQLDYKNN	10	Unmodified	_EDIQLDYKNN_					0	0	0		ENSG00000162576|ENST00000309212|MXRA8;nc|ENSG00000162576|Q9BRK3-4|MXRA8;nc|ENSG00000162576|Q9BRK3-3|MXRA8;ENST00000473097.5_1_1:1288733-1289815:-|nuORF	ENSG00000162576|ENST00000309212|MXRA8	ENSG00000162576|ENST00000309212|MXRA8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.9223327636719	3	417.866575	1250.5779	0.73392	0.00030668	1.2322	0.0005149	1.9661	0.00082158	417.8662152124841	105.91	0.23537	106.01	105.8	106.03	0.099007					6	5	2	0	0	0	0.37624	1	11302	11302		20.03	5.7872	1	25888			5673	5698	3931	3937	6304	6304					-0.037370062953641536
EDIQNWWR	8	Unmodified	_EDIQNWWR_					0	0	0			REV__nc|ENSG00000166676|A6NH52-2|TVP23A	REV__nc|ENSG00000166676|A6NH52-2|TVP23A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.7720947265625	2	573.76998	1145.52541	-0.85757	-0.00049205	3.6425	0.00209	2.785	0.0015979	573.771928991387	37.93	0.96849	37.88	37.584	38.553	-0.050369					43	21	3	0	0	0	0.89962	1	2624	2624		38.806	1.647	1	394790	+		5674	21309	3932	3938	6305	6305					-0.04153499847666353
EDIVNKEDI	9	Unmodified	_EDIVNKEDI_					0	0	0		ENSG00000171495|ENST00000399564|MROH2B	ENSG00000171495|ENST00000399564|MROH2B	ENSG00000171495|ENST00000399564|MROH2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.7689208984375	2	537.769311	1073.52407	0.2234	0.00012014	0.26948	0.00014492	0.49287	0.00026505	537.7692334658091	24.754	0.76684	24.426	24.116	24.883	-0.32825					45	16	4	0	0	0	0.39367	1	1202	1202		58.23	3.5076	1	482240			5675	6673	3933	3939	6306	6306					-0.009751787270943169
EDIVVVLGPS	10	Unmodified	_EDIVVVLGPS_					0	0	0		ENSG00000179630|ENST00000325686|LACC1	ENSG00000179630|ENST00000325686|LACC1	ENSG00000179630|ENST00000325686|LACC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.287353515625	2	514.28714	1026.55973	-0.050448	-2.5945E-05	-0.14695	-7.5575E-05	-0.1974	-0.00010152	514.2869386950687	81.093	0.93762	81.157	80.839	81.777	0.064384					49	21	4	0	0	0	0.344	1	7962	7962		68.787	7.8149	1	381380			5676	7286	3934	3940	6307	6307					0.04750903520562133
EDKETLLVHE	10	Unmodified	_EDKETLLVHE_					0	0	0		nc|ENSG00000186638|Q5T7B8-4|KIF24;nc|ENSG00000186638|Q5T7B8-2|KIF24;ENSG00000186638|ENST00000402558|KIF24	nc|ENSG00000186638|Q5T7B8-4|KIF24	nc|ENSG00000186638|Q5T7B8-4|KIF24	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.876953125	3	404.875071	1211.60338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.37	1	119.37	118.87	119.87	0								0	0	0	0.45132	1	12114	12114		25.126	2.5644	1				5677	7809	3935	3941	6308	6308					0.006044682270612611
EDKILLCY	8	Unmodified	_EDKILLCY_					0	0	0		nc|ENSG00000101901|Q9NP73-4|ALG13;nc|ENSG00000101901|Q9NP73-3|ALG13;ENSG00000101901|ENST00000394780|ALG13	nc|ENSG00000101901|Q9NP73-4|ALG13	nc|ENSG00000101901|Q9NP73-4|ALG13	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.80340576171875	2	498.757161	995.499769	-0.60006	-0.00029929	4.23	0.0021097	3.6299	0.0018104	498.759324502287	51.984	0.5422	51.961	51.653	52.195	-0.02343					20	12	2	0	0	0	0.4196	1	4581	4581		37.028	3.5129	1	97030			5678	1970	3936	3942	6309	6309					0.0018388958568493763
EDKIPLLVV	9	Unmodified	_EDKIPLLVV_					0	0	0		ENSG00000144118|ENST00000272519|RALB;nc|ENSG00000144118|P11234-3|RALB;nc|ENSG00000144118|P11234-2|RALB	ENSG00000144118|ENST00000272519|RALB	ENSG00000144118|ENST00000272519|RALB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.81103515625	2	513.3157	1024.61685	0.058896	3.0232E-05	2.6631	0.001367	2.722	0.0013973	513.3168563695737	57.006	0.73741	56.978	56.69	57.428	-0.028664					29	22	2	0	0	0	0.20789	1	5234	5234		40.778	5.1599	1	125000			5679	4689	3937	3943	6310	6310					0.10552370796949617
EDKIQRLRLLY	11	Unmodified	_EDKIQRLRLLY_					0	0	0			REV__ENST00000483879.5_1_7:108137026-108166538:-|nuORF	REV__ENST00000483879.5_1_7:108137026-108166538:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.77197265625	3	482.952426	1445.83545	-0.16171	-7.8099E-05	0.99922	0.00048257	0.83751	0.00040448	483.28712574595306	27.42	0.70235	27.244	26.971	27.673	-0.17559					25	15	2	0	0	0	0.17911	1	1558	1558		18.531	4.445	1	118700	+		5680	19201	3938	3944	6311	6311					0.13036355368467412
EDKIQRLRLLY	11	Unmodified	_EDKIQRLRLLY_					0	0	0			REV__ENST00000483879.5_1_7:108137026-108166538:-|nuORF	REV__ENST00000483879.5_1_7:108137026-108166538:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7716064453125	3	482.952426	1445.83545	0.9957	0.00048088	0.049961	2.4129E-05	1.0457	0.000505	482.95238448196216	27.424	0.68706	27.169	26.9	27.587	-0.25465					36	15	3	0	0	0	0.18066	1	1596	1596		9.6461	0	1	107600	+		5681	19201	3938	3944	6312	6312					0.13036355368467412
EDKMARNEIV	10	Unmodified	_EDKMARNEIV_					0	0	0			REV__ENST00000604975.1_1_9:35685264-35689844:-|nuORF	REV__ENST00000604975.1_1_9:35685264-35689844:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	602.801025390625	2	602.803162	1203.59177	0.65075	0.00039227	-3.9864	-0.002403	-3.3357	-0.0020107	602.8006043046089	72.774	0.78786	72.904	72.521	73.309	0.13064					71	26	4	0	0	0	0.2953	1	6703	6703		72.879	24.92	1	436040	+	+	5682	16012	3939	3945	6313	6313					-0.0018805206793786056
EDKPLRFLA	9	Unmodified	_EDKPLRFLA_					0	0	0			REV__ENSG00000109436|ENST00000442267|TBC1D9	REV__ENSG00000109436|ENST00000442267|TBC1D9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	544.80712890625	2	544.808574	1087.60259	0.15928	8.6776E-05	-3.8601	-0.002103	-3.7008	-0.0020162	544.8063612053201	24.541	0.98756	24.642	24.281	25.269	0.10045					123	49	4	0	0	0	0.58668	1	865	865		47.657	3.2801	1	1023100	+		5683	17756	3940	3946	6314	6314					0.062297183686723656
EDKVKALLH	9	Unmodified	_EDKVKALLH_					0	0	0		nc|ENSG00000168918|Q92835-2|INPP5D;ENSG00000168918|ENST00000445964|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D	nc|ENSG00000168918|Q92835-2|INPP5D	nc|ENSG00000168918|Q92835-2|INPP5D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8081665039062	2	526.808574	1051.60259	2.1591	0.0011374	-4.2531	-0.0022406	-2.0941	-0.0011032	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.18566	2	12232	12232;12389		76.847	6.5852	1	36320000			5684	6451	3941	3947	6315;6316	6315					0.07885718368675043
EDKVKKMKLPK	11	Unmodified	_EDKVKKMKLPK_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.6073303222656	3	448.607491	1342.80064	-0.14494	-6.5021E-05	4.0842	0.0018322	3.9393	0.0017672	448.9437169224278	77.071	0.84238	77.124	76.655	77.498	0.052704					75	41	2	0	0	0	0.77803	1	7459	7459		15.921	2.4127	1	780830			5685	8298	3942	3948	6317	6317					0.14295396236138913
EDLDYLAALDN	11	Unmodified	_EDLDYLAALDN_					0	0	0		nc|ENSG00000089876|Q7L7V1-2|DHX32;ENSG00000089876|ENST00000284690|DHX32	nc|ENSG00000089876|Q7L7V1-2|DHX32	nc|ENSG00000089876|Q7L7V1-2|DHX32	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92254638671875	3	417.862831	1250.56666	-1.8947	-0.00079171	-1.8674	-0.00078032	-3.7621	-0.001572	417.86224931169176	105.69	0.15356	105.77	105.65	105.8	0.07312					5	3	2	0	0	0	0.17432	1	11201	11201		11.455	0	1	40490			5686	1634	3943	3949	6318	6318					-0.04859828389521681
EDLEAIRLRE	10	Unmodified	_EDLEAIRLRE_					0	0	0		ENST00000518928.1_1_8:143381726-143407541:-|nuORF;nc|ENSG00000171045|Q96NA8-2|TSNARE1;ENSG00000171045|ENST00000524325|TSNARE1	ENST00000518928.1_1_8:143381726-143407541:-|nuORF	ENST00000518928.1_1_8:143381726-143407541:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3355102539062	2	622.335684	1242.65681	0.74466	0.00046343	0.55512	0.00034547	1.2998	0.0008089	622.3359336056161	110.94	1.6886	110.97	110.28	111.96	0.031738					155	57	4	0	0	0	0.85259	1	12230	12230		14.865	0	1	299380			5687	6635	3944	3950	6319	6319					0.045192657295501704
EDLELIAAVN	10	Unmodified	_EDLELIAAVN_					0	0	0			REV__ENST00000566749.5_1_16:30094185-30096380:+|nuORF	REV__ENST00000566749.5_1_16:30094185-30096380:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.347412109375	2	543.787504	1085.56045	-0.30264	-0.00016457	0.15606	8.4861E-05	-0.14659	-7.9712E-05	543.7874716314699	79.926	0.46268	80.459	80.196	80.659	0.53307					16	10	2	0	0	0	0.37624	1	9218	9218		39.253	5.7372	1	110440	+		5688	20196	3945	3951	6320	6320					0.021096981696246075
EDLELIAAVN	10	Unmodified	_EDLELIAAVN_					0	0	0			REV__ENST00000566749.5_1_16:30094185-30096380:+|nuORF	REV__ENST00000566749.5_1_16:30094185-30096380:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	543.787504	1085.56045	-0.74297	-0.00040402	1.0067	0.00054742	0.2637	0.0001434	543.7877750528053	80.011	0.50713	80.427	80.125	80.632	0.41621	-0.015756	0.00065992	NaN	36.447	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133560	+		5689	20196	3945	3951							0.021096981696246075
EDLGLGKVH	9	Unmodified	_EDLGLGKVH_					0	0	0			REV__nc|ENSG00000175792|Q9Y265-2|RUVBL1	REV__nc|ENSG00000175792|Q9Y265-2|RUVBL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.64630126953125	2	484.263999	966.513445	-1.5529	-0.000752	1.4259	0.0006905	-0.12701	-6.1504E-05	484.2645840985918	47.537	0.52742	47.534	47.273	47.8	-0.002449					26	18	2	0	0	0	0.20789	1	3872	3872		35.618	0	1	203130	+		5690	22084	3946	3952	6321	6321					0.02884883409149097
EDLGLLLAG	9	Unmodified	_EDLGLLLAG_					0	0	0		ENSG00000197599|ENST00000389176|CCDC154	ENSG00000197599|ENST00000389176|CCDC154	ENSG00000197599|ENST00000389176|CCDC154	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7542724609375	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.69914	1	8006	8006		40.573	1.5511	1	394230			5691	8180	3947	3953	6322	6322					0.04262962803340997
EDLGLLLAG	9	Unmodified	_EDLGLLLAG_					0	0	0		ENSG00000197599|ENST00000389176|CCDC154	ENSG00000197599|ENST00000389176|CCDC154	ENSG00000197599|ENST00000389176|CCDC154	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7547912597656	2	450.755475	899.496398	0.64847	0.0002923	-3.528	-0.0015903	-2.8795	-0.001298	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.58151	1	7907	7907		47.916	1.9636	1	162850			5692	8180	3947	3953	6323	6323					0.04262962803340997
EDLGRKRTT	9	Unmodified	_EDLGRKRTT_					0	0	0		nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA;ENSG00000174197|ENST00000703841|MGA	nc|ENSG00000174197|Q8IWI9-3|MGA	nc|ENSG00000174197|Q8IWI9-3|MGA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.326904296875	2	538.296362	1074.57817	-0.15214	-8.1898E-05	-0.017472	-9.405E-06	-0.16961	-9.1303E-05	538.2976624549661	100.95	0.25323	100.98	100.84	101.09	0.031036					8	5	2	0	0	0	0.20789	1	10766	10766		32.812	11.865	1	109860			5693	6914	3948	3954	6324	6324					0.0438645821514001
EDLIKPRL	8	Unmodified	_EDLIKPRL_					0	0	0		ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2979736328125	2	492.297842	982.581131	0.010803	5.3184E-06	-0.45723	-0.0002251	-0.44643	-0.00021978	492.2974871625459	54.049	1.8007	54.456	53.861	55.661	0.40663					79	42	3	0	0	0	0.60357	1	5489	5489		71.296	11.002	1	1817100			5694	2231	3949	3955	6325	6325					0.08914333339930636
EDLNKWLN	8	Unmodified	_EDLNKWLN_					0	0	0			REV__ENSG00000112659|ENST00000252050|CUL9	REV__ENSG00000112659|ENST00000252050|CUL9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3128051757812	2	516.261456	1030.50836	-0.071637	-3.6983E-05	1.4427	0.00074481	1.3711	0.00070783	516.26366014858	58.855	0.32602	59.408	59.172	59.498	0.55323					11	7	2	0	0	0	0.4196	1	6204	6204		47.916	13.743	1	86803	+		5695	17958	3950	3956	6326	6326					-0.005674204534670935
EDLPLVRLE	9	Unmodified	_EDLPLVRLE_					0	0	0		ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF	ENSG00000139687|ENST00000267163|RB1	ENSG00000139687|ENST00000267163|RB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.3008422851562	2	542.305864	1082.59717	-0.45975	-0.00024933	1.0799	0.00058563	0.62013	0.0003363	542.8081545709433	67.67	0.76074	68.218	67.773	68.534	0.54819					28	17	2	0	0	0	0.20789	1	7391	7391		74.255	22.92	1	181820			5696	4390	3951	3957	6327	6327					0.05917994786182135
EDLQSKEWLH	10	Unmodified	_EDLQSKEWLH_					0	0	0			REV__nc|ENSG00000188162|Q6ZRI0|OTOG	REV__nc|ENSG00000188162|Q6ZRI0|OTOG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7491455078125	3	428.878815	1283.61462	-2.2873	-0.00098099	-1.2095	-0.00051875	-3.4969	-0.0014997	428.8781109751817	41.129	0.31646	41.521	41.379	41.695	0.39209					11	8	2	0	0	0	0.37624	1	3560	3560		26.063	0	1	341410	+		5697	22983	3952	3958	6328	6328					-0.01584709678809304
EDLQSKEWLH	10	Unmodified	_EDLQSKEWLH_					0	0	0			REV__nc|ENSG00000188162|Q6ZRI0|OTOG	REV__nc|ENSG00000188162|Q6ZRI0|OTOG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.749755859375	3	428.878815	1283.61462	-1.2962	-0.00055591	-1.5915	-0.00068256	-2.8877	-0.0012385	428.87803128620646	40.996	0.24831	41.63	41.461	41.709	0.6339					12	6	3	0	0	0	0.37624	1	3555	3555		25.126	10.347	1	306510	+		5698	22983	3952	3958	6329	6329					-0.01584709678809304
EDLRITKPK	9	Unmodified	_EDLRITKPK_					0	0	0			REV__ENST00000487422.1_1_X:154753982-154774937:-|nuORF	REV__ENST00000487422.1_1_X:154753982-154774937:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3260498046875	2	550.327131	1098.63971	-1.4511	-0.00079856	1.2412	0.00068307	-0.20986	-0.00011549	550.3279242402356	100.07	1.1382	100.24	99.716	100.85	0.17199					63	25	3	0	0	0	0.77696	1	10348	10348		31.53	4.8369	1	345000	+		5699	22815	3953	3959	6330	6330					0.09433389914420331
EDLTMGWFASH	11	Unmodified	_EDLTMGWFASH_					0	0	0			REV__nc|ENSG00000142910|Q9GZM7-3|TINAGL1	REV__nc|ENSG00000142910|Q9GZM7-3|TINAGL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	647.2804565429688	2	647.282063	1292.54957	1.5693	0.0010158	-4.0831	-0.0026429	-2.5137	-0.0016271	647.2794672984256	58.664	1.0563	59.217	58.718	59.775	0.55323					72	25	4	0	0	0	0.61369	1	6138	6138		42.864	10.052	1	2912600	+		5700	19760	3954	3960	6331	6331					-0.08500027476316063
EDMHDSES	8	Unmodified	_EDMHDSES_					0	0	0		ENSG00000131951|ENST00000570145|LRRC9;nc|ENSG00000131951|Q6ZRR7-2|LRRC9;nc|ENSG00000131951|Q6ZRR7|LRRC9	ENSG00000131951|ENST00000570145|LRRC9	ENSG00000131951|ENST00000570145|LRRC9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.27813720703125	2	475.163822	948.31309	-1.0631	-0.00050516	3.1922	0.0015168	2.1291	0.0010117	475.16528186328617	58.768	0.17054	59.321	59.172	59.343	0.55323					5	3	2	0	0	0	0.4196	1	6163	6163		31.955	0	1	63353			5701	3756	3955	3961	6332	6332					-0.1631337904062775
EDNKTLVY	8	Unmodified	_EDNKTLVY_					0	0	0			REV__ENSG00000156650|ENST00000287239|KAT6B	REV__ENSG00000156650|ENST00000287239|KAT6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2471923828125	2	491.248015	980.481476	0.44943	0.00022078	-0.36733	-0.00018045	0.082099	4.0331E-05	491.2476788316303	49.518	0.7767	50.363	50.074	50.851	0.84501					39	18	3	0	0	0	0.93529	1	4858	4858		52.299	0	1	1328800	+		5702	20500	3956	3962	6333	6333					-0.009545290646656213
EDNPRVSKP	9	Unmodified	_EDNPRVSKP_					0	0	0			REV__ENSG00000159763|ENST00000291009|PIP	REV__ENSG00000159763|ENST00000291009|PIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2720336914062	2	521.269813	1040.52507	0.85582	0.00044611	2.8738	0.001498	3.7296	0.0019441	521.2711995930783	55.041	2.3001	55.442	53.939	56.239	0.40101					108	54	3	0	0	0	0.15959	1	5659	5659		82.241	2.5279	1	1444900	+		5703	20681	3957	3963	6334	6334					0.006430804324736528
EDNPRVSKP	9	Unmodified	_EDNPRVSKP_					0	0	0			REV__ENSG00000159763|ENST00000291009|PIP	REV__ENSG00000159763|ENST00000291009|PIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.2722778320312	2	521.269813	1040.52507	-0.13025	-6.7897E-05	3.8445	0.002004	3.7143	0.0019361	521.2716557645425	54.811	2.0064	55.38	54.275	56.281	0.56836					100	47	3	0	0	0	0.045756	1	5588	5588		109.48	7.8776	1	1599700	+		5704	20681	3957	3963	6335	6335					0.006430804324736528
EDPEDLKNE	9	Unmodified	_EDPEDLKNE_					0	0	0		ENST00000556454.1_1_14:95660863-95677170:-|nuORF;ENSG00000165959|ENST00000298912|CLMN	ENST00000556454.1_1_14:95660863-95677170:-|nuORF	ENST00000556454.1_1_14:95660863-95677170:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.7395629882812	2	544.740751	1087.46695	-0.85339	-0.00046487	-1.8331	-0.00099854	-2.6864	-0.0014634	544.7398052961269	40.306	0.49451	40.316	40.074	40.568	0.0092812					16	11	2	0	0	0	0.14236	1	2892	2892		85.161	25.043	1	127030			5705	6142	3958	3964	6336	6336					-0.07328646003475114
EDPKYIIN	8	Unmodified	_EDPKYIIN_					0	0	0		ENST00000460021.1_1_7:102994369-103002536:+|nuORF;ENSG00000161057|ENST00000292644|PSMC2	ENST00000460021.1_1_7:102994369-103002536:+|nuORF	ENST00000460021.1_1_7:102994369-103002536:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.79681396484375	2	496.258382	990.502212	3.6675	0.00182	1.6443	0.000816	5.3118	0.002636	496.25912414442064	105.3	0.15567	105.49	105.36	105.52	0.18647					5	3	2	0	0	0	0.4196	1	12872	12872		45.952	0	1	64686			5706	5629	3959	3965	6337	6337					0.00658061315004943
EDPLSLIQL	9	Unmodified	_EDPLSLIQL_					0	0	0			REV__ENST00000250457.7_1_14:34394881-34395019:-|nuORF	REV__ENST00000250457.7_1_14:34394881-34395019:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.287353515625	2	514.28714	1026.55973	0.17645	9.0748E-05	-0.50852	-0.00026152	-0.33206	-0.00017078	514.2867610962213	80.961	0.99719	81.017	80.6	81.597	0.055916					45	22	3	0	0	0	0.35373	1	8065	8065		60.972	8.6728	1	361220	+		5707	24281	3960	3966	6338	6338					0.047509035205848704
EDPQCPDSVS	10	Unmodified	_EDPQCPDSVS_					0	0	0		nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1;ENSG00000179981|ENST00000580243|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.7695922851562	2	538.713679	1075.4128	0.099288	5.3488E-05	-4.3274	-0.0023313	-4.2282	-0.0022778	539.2123663009527	24.886	0.18335	24.558	24.43	24.613	-0.32825					8	3	3	0	0	0	0.37624	1	1230	1230		32.812	11.865	1	27892			5708	7311	3961	3967	6339	6339					-0.12188561426683009
EDPSLKIV	8	Unmodified	_EDPSLKIV_					0	0	0			REV__ENSG00000198092|ENST00000356291|TMPRSS11F	REV__ENSG00000198092|ENST00000356291|TMPRSS11F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7545471191406	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.85277	1	7960	7960		25.45	0	1	394230	+		5709	23298	3962	3968	6340	6340					0.042629628033296285
EDQHKIQIA	9	Unmodified	_EDQHKIQIA_					0	0	0			REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1	REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.284423828125	2	541.285463	1080.55637	0.81811	0.00044283	-1.0214	-0.00055284	-0.20325	-0.00011001	541.2847834834622	20.168	0.8377	20.239	19.945	20.783	0.071129					65	34	3	0	0	0	0.51307	1	455	455		51.335	6.8044	1	219780	+		5710	17290	3963	3969	6341	6341					0.019316534665676954
EDQQQGEDEHQ	11	Unmodified	_EDQQQGEDEHQ_					0	0	0		ENSG00000135222|ENST00000353151|CSN2	ENSG00000135222|ENST00000353151|CSN2	ENSG00000135222|ENST00000353151|CSN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.6232604980469	3	448.176248	1341.50692	0.4257	0.00019079	2.8401	0.0012729	3.2658	0.0014637	448.5109694504379	64.907	0.69001	65.031	64.464	65.154	0.12397					30	22	2	0	0	0	0.17365	1	5746	5746		33.039	10.46	1	171100			5711	3993	3964	3970	6342	6342					-0.15017751070831764
EDQVKKLR	8	Unmodified	_EDQVKKLR_					0	0	0			REV__nc|ENSG00000151914|Q03001-3|DST	REV__nc|ENSG00000151914|Q03001-3|DST	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.24053955078125	2	508.298373	1014.58219	-1.3212	-0.00067158	3.3226	0.0016889	2.0013	0.0010173	508.29992537666584	39.569	0.83233	39.937	39.6	40.432	0.36797					25	19	2	0	0	0	0.4196	1	3273	3273		25.574	17.884	1	97659	+		5712	29932	3965	3971	6343	6343					0.07548547708847764
EDRDKVRLIQR	11	Unmodified	_EDRDKVRLIQR_					0	0	0			REV__nc|ENSG00000133818|P62070-2|RRAS2	REV__nc|ENSG00000133818|P62070-2|RRAS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.9405212402344	3	476.60743	1426.80046	-2.0432	-0.00097378	0.49154	0.00023427	-1.5516	-0.00073951	476.6076307351805	16.045	0.20598	16.045	15.918	16.124	0					13	9	2	0	0	0	0.75779	1	93	93		20.315	1.0523	1	61908	+		5713	19098	3966	3972	6344	6344					0.10413112560513582
EDREALISL	9	Unmodified	_EDREALISL_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000529821.5_1_11:6587803-6593213:+|nuORF;ENST00000530197.5_1_11:6587352-6593213:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7771606445312	2	523.279846	1044.54514	-0.78804	-0.00041236	-0.25982	-0.00013596	-1.0479	-0.00054832	523.2791520366875	44.856	0.45226	45.7	45.501	45.954	0.84437					18	10	2	0	0	0	0.20789	1	4127	4127		56.721	25.191	1	487830			5714	7276	3967	3973	6345	6345					0.02464831372435583
EDRKWLKEI	9	Unmodified	_EDRKWLKEI_					0	0	0			REV__ENSG00000153207|ENST00000648844|AHCTF1	REV__ENSG00000153207|ENST00000648844|AHCTF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.8370361328125	2	608.837862	1215.66117	-0.43425	-0.00026439	-0.86567	-0.00052705	-1.2999	-0.00079144	608.8372155374379	110.58	1.0111	110.52	110.29	111.3	-0.055084					101	32	4	0	0	0	0.78058	1	12044	12044		30.504	3.8107	1	4475900	+		5715	20337	3968	3974	6346	6346					0.061967749431460106
EDRPPWQGE	9	Unmodified	_EDRPPWQGE_					0	0	0			REV__nc|ENSG00000163704|Q5FWE3-3|PRRT3	REV__nc|ENSG00000163704|Q5FWE3-3|PRRT3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.3034057617188	2	557.25162	1112.48869	-0.40001	-0.00022291	-0.10237	-5.7043E-05	-0.50238	-0.00027995	557.2513507787502	44.568	0.64558	45.032	44.825	45.47	0.46313					22	15	2	0	0	0	0.20789	1	4133	4133		24.519	1.9395	1	379080	+		5716	20962	3969	3975	6347	6347					-0.06305796464221203
EDRPVKDEDY	10	Unmodified	_EDRPVKDEDY_					0	0	0			REV__ENSG00000278540|ENST00000616317|ACACA	REV__ENSG00000278540|ENST00000616317|ACACA	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.4104614257812	2	633.285857	1264.55716	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.484	1	22.476	21.976	22.976	-0.0088215								0	0	0	0.45132	1	666	666		31.53	5.9558	1		+		5717	24037	3970	3976	6348	6348					-0.06453596675032713
EDRYQIPG	8	Unmodified	_EDRYQIPG_					0	0	0			REV__ENST00000493669.2_1_1:28733953-28817463:+|nuORF	REV__ENST00000493669.2_1_1:28733953-28817463:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.23626708984375	2	489.237981	976.461409	0.49831	0.00024379	-3.193	-0.0015621	-2.6947	-0.0013184	489.2364393796821	68.162	0.65366	68.29	67.963	68.617	0.12838					40	24	2	0	0	0	0.87479	1	6137	6137		30.504	3.8107	1	129000	+		5718	23463	3971	3977	6349	6349					-0.02776280004616183
EDSAEETEAK	10	Unmodified	_EDSAEETEAK_					0	0	0		nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906|ILF3;ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10792469-10795138:+|nuORF	nc|ENSG00000129351|Q12906-5|ILF3	nc|ENSG00000129351|Q12906-5|ILF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.73681640625	2	554.735665	1107.45678	0.25262	0.00014014	0.90775	0.00050356	1.1604	0.0006437	554.7359710182415	30.684	0.5824	30.637	30.181	30.763	-0.047062					26	14	3	0	0	0	0.8608	1	1682	1682		34.173	0	1	46030			5719	3584	3972	3978	6350	6350					-0.092652537287222
EDSAEHRH	8	Unmodified	_EDSAEHRH_					0	0	0		ENSG00000130528|ENST00000252825|HRC	ENSG00000130528|ENST00000252825|HRC	ENSG00000130528|ENST00000252825|HRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.71417236328125	2	490.712662	979.410771	1.1619	0.00057018	0.61372	0.00030116	1.7756	0.00087133	490.7130625039328	98.889	1.7535	99.25	98.566	100.32	0.36136					108	43	4	0	0	0	0.90465	1	11935	11935		40.573	0	1	2946000			5720	3651	3973	3979	6351	6351					-0.07975809329616368
EDSIGIHA	8	Unmodified	_EDSIGIHA_					0	0	0		ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.2069091796875	2	421.20615	840.397747	-0.40517	-0.00017066	2.4363	0.0010262	2.0311	0.00085552	421.20707722474685	17.044	0.21802	16.965	16.863	17.081	-0.079056					14	7	2	0	0	0	0.91005	1	181	181		42.474	5.446	1	78928			5721	7452	3974	3980	6352	6352					-0.02883640441712032
EDSIGIHA	8	Unmodified	_EDSIGIHA_					0	0	0		ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.207275390625	2	421.20615	840.397747	0.96076	0.00040468	0.99478	0.00041901	1.9555	0.00082369	421.20645789589787	17.415	0.34892	16.932	16.804	17.153	-0.48256					12	7	2	0	0	0	0.9159	1	256	256		44.531	2.0566	1	222450			5722	7452	3974	3980	6353	6353					-0.02883640441712032
EDSPLEPPAG	10	Unmodified	_EDSPLEPPAG_					0	0	0		ENST00000178640.9_1_15:67835129-67835273:+|nuORF	ENST00000178640.9_1_15:67835129-67835273:+|nuORF	ENST00000178640.9_1_15:67835129-67835273:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.7037353515625	2	506.235104	1010.45566	-0.93004	-0.00047082	1.0988	0.00055623	0.16871	8.5407E-05	506.235370141518	32.772	0.51937	32.77	32.493	33.012	-0.0016365					19	12	2	0	0	0	0.37624	1	1851	1851		21.96	0	1	35227			5723	9088	3975	3981	6354	6354					-0.04915423306943012
EDSTDCSCPD	10	Unmodified	_EDSTDCSCPD_					0	0	0			REV__nc|ENSG00000198369|Q7Z698-2|SPRED2	REV__nc|ENSG00000198369|Q7Z698-2|SPRED2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.1658935546875	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.252	1	72.382	71.882	72.882	0.1301								0	0	0	0.45132	1	6620	6620		19.997	2.6318	1		+		5724	23319	3976	3982	6355	6355					-0.21549077329086685
EDSVSLLQKNP	11	Unmodified	_EDSVSLLQKNP_					0	0	0		ENSG00000050030|ENST00000055682|NEXMIF	ENSG00000050030|ENST00000055682|NEXMIF	ENSG00000050030|ENST00000055682|NEXMIF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	616.3217163085938	2	615.322242	1228.62993	0.058503	3.5998E-05	1.3505	0.00083098	1.409	0.00086697	615.3236708797939	53.979	0.41483	54.564	54.376	54.79	0.58474					14	9	2	0	0	0	0.15252	1	5498	5498		40.058	0	1	155260			5725	991	3977	3983	6356	6356					0.024761571183944397
EDTDDPFY	8	Unmodified	_EDTDDPFY_					0	0	0			REV__nc|ENSG00000137474|Q13402-5|MYO7A	REV__nc|ENSG00000137474|Q13402-5|MYO7A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.257080078125	2	501.190362	1000.36617	-0.010471	-5.2481E-06	-3.2273	-0.0016175	-3.2377	-0.0016227	501.1886494293553	52.918	1.7471	53.532	52.95	54.697	0.61436					52	41	2	0	0	0	0.4196	1	5312	5312		37.028	24.069	1	181630	+		5726	19385	3978	3984	6357	6357					-0.1339967798633097
EDTGMENW	8	Unmodified	_EDTGMENW_					0	0	0			REV__nc|ENSG00000109680|Q8N5T2-2|TBC1D19	REV__nc|ENSG00000109680|Q8N5T2-2|TBC1D19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.1831970214844	2	491.184557	980.354561	-0.67764	-0.00033285	2.5466	0.0012509	1.869	0.00091803	491.18572201502644	73.987	0.77419	74.114	73.851	74.625	0.12711					56	31	2	0	0	0	0.87922	1	6801	6801		31.955	8.9124	1	181110	+		5727	17766	3979	3985	6358	6358					-0.13640198281314042
EDTIAEHCSD	10	Unmodified	_EDTIAEHCSD_					0	0	0			REV__ENSG00000139668|ENST00000298125|WDFY2	REV__ENSG00000139668|ENST00000298125|WDFY2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3401489257812	2	560.216585	1118.41862	1.3817	0.00077404	4.3178	0.0024189	5.6995	0.0031929	560.2178744014763	102.22	0.28157	102.27	102.01	102.3	0.043198					10	6	2	0	0	0	0.37624	1	11036	11036		34.173	0	1	98579	+		5728	19559	3980	3986	6359	6359					-0.13585462915011703
EDTPHFPD	8	Unmodified	_EDTPHFPD_					0	0	0			REV__ENSG00000126461|ENST00000360565|SCAF1	REV__ENSG00000126461|ENST00000360565|SCAF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2779846191406	2	479.201064	956.387576	0.68056	0.00032613	2.1121	0.0010121	2.7927	0.0013383	479.20198216170894	86.129	0.52702	86.573	86.325	86.852	0.44331					18	12	2	0	0	0	0.4196	1	10079	10079		30.504	0	1	139950	+		5729	18701	3981	3987	6360	6360					-0.092362481669511
EDTQKKIH	8	Unmodified	_EDTQKKIH_					0	0	0		ENSG00000154240|ENST00000535342|CEP112	ENSG00000154240|ENST00000535342|CEP112	ENSG00000154240|ENST00000535342|CEP112	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.3113708496094	2	499.766906	997.519259	0.80311	0.00040137	4.3641	0.0021811	5.1673	0.0025824	500.27220237852015	32.403	0.21621	32.51	32.446	32.662	0.10707					5	4	2	0	0	0	0.4196	1	2289	2289		65.803	41.6	1	30095			5730	5265	3982	3988	6361	6361					0.020399819208023473
EDTSCECH	8	Unmodified	_EDTSCECH_					0	0	0			REV__nc|ENSG00000150093|P05556-2|ITGB1	REV__nc|ENSG00000150093|P05556-2|ITGB1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	461.8133544921875	2	462.147117	922.279682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.328	1	72.366	71.866	72.866	0.037148								0	0	0	0.30884	1	6882	6882		13.775	0	1		+		5731	20203	3983	3989	6362	6362					-0.18456704084189823
EDTSCECH	8	Unmodified	_EDTSCECH_					0	0	0			REV__nc|ENSG00000150093|P05556-2|ITGB1	REV__nc|ENSG00000150093|P05556-2|ITGB1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	462.1487121582031	2	462.147117	922.279682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.793	1	74.879	74.379	75.379	0.085907								0	0	0	0.30976	1	6900	6900		12.959	0	1		+		5732	20203	3983	3989	6363	6363					-0.18456704084189823
EDVEAARRYV	10	Unmodified	_EDVEAARRYV_					0	0	0		ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8587036132812	2	604.306926	1206.5993	0.11719	7.0816E-05	3.1125	0.0018809	3.2297	0.0019517	604.3085218939559	83.461	0.75534	83.916	83.519	84.274	0.45556					28	17	2	0	0	0	0.37624	1	9679	9679		12.812	0	1	456470			5733	2876	3984	3990	6364	6364					0.0042642352398161165
EDVEEPSFH	9	Unmodified	_EDVEEPSFH_					0	0	0			REV__ENST00000425494.1_1_10:37812205-37812634:+|nuORF	REV__ENST00000425494.1_1_10:37812205-37812634:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.4959106445312	2	544.730186	1087.44582	-0.037355	-2.0348E-05	0.84717	0.00046148	0.80982	0.00044113	544.7303042060887	35.434	0.3788	35.681	35.554	35.933	0.24769					14	9	2	0	0	0	0.20789	1	2735	2735		27.882	7.8855	1	129860	+		5734	26533	3985	3991	6365	6365					-0.09440611312334113
EDVEEPSFH	9	Unmodified	_EDVEEPSFH_					0	0	0			REV__ENST00000425494.1_1_10:37812205-37812634:+|nuORF	REV__ENST00000425494.1_1_10:37812205-37812634:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	544.730186	1087.44582	1.1468	0.00062471	-0.95772	-0.0005217	0.1891	0.00010301	544.7296632947133	35.537	0.30512	35.919	35.71	36.015	0.3812	0.11869	-0.00049694	NaN	27.882	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120420	+		5735	26533	3985	3991							-0.09440611312334113
EDVEPYGAV	9	Unmodified	_EDVEPYGAV_					0	0	0		ENST00000436996.1_1_22:28318168-28318243:+|nuORF	ENST00000436996.1_1_22:28318168-28318243:+|nuORF	ENST00000436996.1_1_22:28318168-28318243:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.2860412597656	2	489.724372	977.434192	-0.71225	-0.0003488	0.018814	9.2135E-06	-0.69343	-0.00033959	489.72411859003944	60.115	0.32219	60.668	60.428	60.75	0.55323					10	8	2	0	0	0	0.20789	1	6377	6377		37.159	14.117	1	195830			5736	11729	3986	3992	6366	6366					-0.055428083356673596
EDVKIGVL	8	Unmodified	_EDVKIGVL_					0	0	0		ENSG00000187714|ENST00000374115|SLC18A3	ENSG00000187714|ENST00000374115|SLC18A3	ENSG00000187714|ENST00000374115|SLC18A3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7748107910156	2	436.758018	871.501483	2.1571	0.00094212	4.4347	0.0019369	6.5918	0.002879	436.7597322071244	90.647	0.47275	90.693	90.474	90.947	0.046448					16	11	2	0	0	0	0.4196	1	9431	9431		12.959	0	1	200200			5737	7873	3987	3993	6367	6367					0.06059266665965879
EDVKIVILP	9	Unmodified	_EDVKIVILP_					0	0	0		nc|ENSG00000111667|P45974-2|USP5;ENSG00000111667|ENST00000229268|USP5	nc|ENSG00000111667|P45974-2|USP5	nc|ENSG00000111667|P45974-2|USP5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7706909179688	2	513.3157	1024.61685	0.41854	0.00021484	1.4811	0.00076025	1.8996	0.00097509	513.3164344669573	51.025	1.325	51.46	50.793	52.118	0.43505					49	31	3	0	0	0	0.20789	1	5138	5138		30.504	2.4222	1	367070			5738	2598	3988	3994	6368	6368					0.10552370796949617
EDVLGCNVS	9	Unmodified	_EDVLGCNVS_					0	0	0		ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2098693847656	2	468.210575	934.406597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.633	1	70.595	70.095	71.095	-0.037865								0	0	0	0.31117	1	6858	6858		26.693	1.1189	1				5739	2066	3989	3995	6369	6369					-0.06323034867546085
EDVPGAQRELC	11	Unmodified	_EDVPGAQRELC_					0	0	0			REV__ENST00000566303.5_1_15:79059386-79103601:-|nuORF	REV__ENST00000566303.5_1_15:79059386-79103601:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.7825317382812	2	608.78497	1215.55539	0.4097	0.00024942	-1.967	-0.0011975	-1.5573	-0.00094807	608.7830450701787	59.037	1.8079	59.006	58.103	59.911	-0.030888					62	51	2	0	0	0	0.61369	1	5511	5511		42.864	8.7778	1	200150	+		5740	19305	3990	3996	6370	6370					-0.04376928964643412
EDVSACVS	8	Unmodified	_EDVSACVS_					0	0	0			REV__nc|ENSG00000183914|Q9P225-2|DNAH2	REV__nc|ENSG00000183914|Q9P225-2|DNAH2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.25653076171875	2	405.170918	808.327284	-0.35988	-0.00014581	-1.4784	-0.00059902	-1.8383	-0.00074483	405.1695186121612	26.691	0.23315	26.652	26.532	26.765	-0.038523					6	4	2	0	0	0	0.4196	1	1233	1233		24.203	0	1	9858.7	+		5741	22634	3991	3997	6371	6371					-0.08454681821683607
EDVVFLYLI	9	Unmodified	_EDVVFLYLI_					0	0	0		ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1;ENST00000570934.5_1_17:4098183-4145738:-|nuORF	ENSG00000185722|ENST00000341657|ANKFY1	ENSG00000185722|ENST00000341657|ANKFY1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.3069458007812	2	555.807708	1109.60086	-0.89306	-0.00049637	-1.8076	-0.0010047	-2.7007	-0.0015011	555.806604901083	59.553	0.91605	59.54	59.196	60.112	-0.013729					63	24	4	0	0	0	0.72402	1	5514	5514		38.806	0.99462	1	365910			5742	7737	3992	3998	6372	6372					0.050446645600459306
EDVVVVLE	8	Unmodified	_EDVVVVLE_					0	0	0		nc|ENSG00000197062|Q16670|ZSCAN26;ENSG00000197062|ENST00000421553|ZSCAN26	nc|ENSG00000197062|Q16670|ZSCAN26	nc|ENSG00000197062|Q16670|ZSCAN26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.24810791015625	2	451.247483	900.480414	-1.2821	-0.00057856	4.0972	0.0018488	2.815	0.0012703	451.2491871267672	67.547	1.2746	67.683	67.257	68.531	0.13522					88	48	2	0	0	0	0.8347	1	6048	6048		23.042	2.5607	1	186190			5743	8129	3993	3999	6373	6373					0.02619256566435979
EDWFVVNP	8	Unmodified	_EDWFVVNP_					0	0	0		nc|ENSG00000243943|Q96ME7-2|ZNF512;ENSG00000243943|ENST00000355467|ZNF512;ENST00000505973.1_1_2:27821100-27852768:+|nuORF;nc|ENSG00000243943|Q96ME7-3|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.7736511230469	2	503.23745	1004.46035	-0.20344	-0.00010238	-0.30098	-0.00015147	-0.50442	-0.00025384	503.2373544142908	47.72	0.24212	48.643	48.542	48.784	0.92315					8	5	2	0	0	0	0.4196	1	4592	4592		25.45	0	1	118830			5744	8815	3994	4000	6374	6374					-0.04170494373522615
EDWGPASGLV	10	Unmodified	_EDWGPASGLV_					0	0	0			REV__nc|ENSG00000139144|O75747-2|PIK3C2G	REV__nc|ENSG00000139144|O75747-2|PIK3C2G	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.310791015625	2	515.745639	1029.47673	-0.54638	-0.00028179	0.83088	0.00042852	0.2845	0.00014673	515.7465212321364	59.562	0.3651	59.953	59.689	60.055	0.39077					15	8	2	0	0	0	0.37624	1	6289	6289		25.574	3.6142	1	109020	+		5745	15527	3995	4001	6375	6375					-0.036834132074318404
EDYDFEDRVSD	11	Unmodified	_EDYDFEDRVSD_					0	0	0		ENSG00000164066|ENST00000335251|INTU;nc|ENSG00000164066|Q9ULD6-2|INTU;nc|ENSG00000164066|Q9ULD6-3|INTU	ENSG00000164066|ENST00000335251|INTU	ENSG00000164066|ENST00000335251|INTU	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.75836181640625	3	463.852883	1388.53682	0.83024	0.00038511	-3.2914	-0.0015267	-2.4612	-0.0011416	463.85135303083666	33.559	0.37389	33.864	33.702	34.076	0.30494					16	8	2	0	0	0	0.17289	1	2447	2447		27.644	0	1	126840			5746	5908	3996	4002	6376	6376					-0.14190812125525554
EDYGKQPKL	9	Unmodified	_EDYGKQPKL_					0	0	0		ENST00000538768.2_1_16:31138259-31142577:+|nuORF;ENSG00000103510|ENST00000219797|KAT8;nc|ENSG00000103510|Q9H7Z6-2|KAT8	ENST00000538768.2_1_16:31138259-31142577:+|nuORF	ENST00000538768.2_1_16:31138259-31142577:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.2806396484375	2	539.282389	1076.55022	0.30068	0.00016215	-1.3445	-0.00072506	-1.0438	-0.00056291	539.2814888705664	40.82	0.70604	40.901	40.655	41.361	0.081345					54	25	3	0	0	0	0.44421	1	2633	2633		54.776	7.119	1	641090			5747	2087	3997	4003	6377	6377					0.01501135235048423
EDYISVIQS	9	Unmodified	_EDYISVIQS_					0	0	0		nc|ENSG00000153064|Q8NDB2-3|BANK1;nc|ENSG00000153064|Q8NDB2-2|BANK1;ENSG00000153064|ENST00000322953|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.2568359375	2	527.258579	1052.50261	0.86662	0.00045693	-3.5753	-0.0018851	-2.7086	-0.0014282	527.256566104279	25.63	0.81838	25.598	25.164	25.983	-0.032125					65	25	4	0	0	0	0.7932	1	1063	1063		23.523	0.48598	1	358050			5748	5212	3998	4004	6378	6378					-0.021545637557892405
EDYSSTEGSGG	11	Unmodified	_EDYSSTEGSGG_					0	0	0		ENSG00000159110|ENST00000342136|IFNAR2	ENSG00000159110|ENST00000342136|IFNAR2	ENSG00000159110|ENST00000342136|IFNAR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.7044677734375	2	544.704365	1087.39418	-0.064362	-3.5058E-05	1.1322	0.00061671	1.0678	0.00058165	544.7050091974189	31.654	0.69953	31.672	31.384	32.084	0.018362					34	16	3	0	0	0	0.6921	1	1725	1725		32.812	2.3088	1	61660			5749	5510	3999	4005	6379	6379					-0.1460239979689959
EDYYDMRRLYT	11	Unmodified	_EDYYDMRRLYT_					0	0	0		ENSG00000164066|ENST00000335251|INTU;nc|ENSG00000164066|Q9ULD6-4|INTU;ENST00000503952.5_1_4:128606686-128637588:+|nuORF	ENSG00000164066|ENST00000335251|INTU	ENSG00000164066|ENST00000335251|INTU	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8974304199219	3	508.897769	1523.67148	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.61	1	119.49	118.99	119.99	-0.12704								0	0	0	0.56276	1	14161	14161		9.2118	2.8909	1				5750	5908	4000	4006	6380	6380					-0.06941030184589181
EEAAANKFRI	10	Unmodified	_EEAAANKFRI_					0	0	0		nc|ENSG00000136114|Q9NS62-2|THSD1;ENSG00000136114|ENST00000258613|THSD1	nc|ENSG00000136114|Q9NS62-2|THSD1	nc|ENSG00000136114|Q9NS62-2|THSD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.803955078125	2	574.806562	1147.59857	0.48446	0.00027847	-0.40177	-0.00023094	0.082685	4.7528E-05	574.8061834619125	33.892	0.55391	33.938	33.653	34.207	0.045853					44	25	2	0	0	0	0.86763	1	1665	1665		26.693	0	1	186370			5751	4088	4001	4007	6381	6381					0.030676288749418745
EEAAKDLADIA	11	Unmodified	_EEAAKDLADIA_					0	0	0		nc|ENSG00000038382|O75962-5|TRIO;nc|ENSG00000038382|O75962-2|TRIO;ENSG00000038382|ENST00000344204|TRIO	nc|ENSG00000038382|O75962-5|TRIO	nc|ENSG00000038382|O75962-5|TRIO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.2860717773438	2	573.287868	1144.56118	0.75041	0.0004302	-2.3185	-0.0013292	-1.5681	-0.00089897	573.2863798357796	30.252	1.3954	30.237	29.476	30.872	-0.015167					45	36	3	0	0	0	0.72106	1	1563	1563		28.081	1.3886	1	68151			5752	14744	4002	4008	6382	6382					-0.005315071813356553
EEADGGLKSW	10	Unmodified	_EEADGGLKSW_					0	0	0		ENSG00000116489|ENST00000263168|CAPZA1	ENSG00000116489|ENST00000263168|CAPZA1	ENSG00000116489|ENST00000263168|CAPZA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.252685546875	2	546.253828	1090.4931	-0.11797	-6.4443E-05	0.45654	0.00024938	0.33856	0.00018494	546.2539890911438	46.734	1.134	46.72	46.189	47.323	-0.013821					37	29	2	0	0	0	0.40664	1	3741	3741		63.534	10.597	1	177660			5753	2921	4003	4009	6383	6383					-0.048523320413323745
EEADGGLKSW	10	Unmodified	_EEADGGLKSW_					0	0	0		ENSG00000116489|ENST00000263168|CAPZA1	ENSG00000116489|ENST00000263168|CAPZA1	ENSG00000116489|ENST00000263168|CAPZA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.254150390625	2	546.253828	1090.4931	-0.090288	-4.932E-05	0.46439	0.00025368	0.37411	0.00020436	546.2538661097627	46.528	0.75542	46.499	46.182	46.938	-0.028782					36	17	3	0	0	0	0.20077	2	3842	3830;3842		85.862	13.619	1	206570			5754	2921	4003	4009	6384;6385	6385					-0.048523320413323745
EEADGGLKSW	10	Unmodified	_EEADGGLKSW_					0	0	0		ENSG00000116489|ENST00000263168|CAPZA1	ENSG00000116489|ENST00000263168|CAPZA1	ENSG00000116489|ENST00000263168|CAPZA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.2528686523438	2	546.253828	1090.4931	0.3156	0.0001724	-0.37918	-0.00020713	-0.063574	-3.4728E-05	546.2536236760411	46.705	0.77705	46.701	46.155	46.932	-0.0041618					27	18	2	0	0	0	0.31985	3	3770	3770;3781;3792		70.816	14.382	1	198050			5755	2921	4003	4009	6386;6387;6388	6386					-0.048523320413323745
EEAEIIRKY	9	Unmodified	_EEAEIIRKY_					0	0	0		ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226549163-226553858:-|nuORF;ENST00000413631.1_1_13:111591276-111591579:+|nuORF	ENSG00000143799|ENST00000366794|PARP1	ENSG00000143799|ENST00000366794|PARP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8073120117188	2	575.808771	1149.60299	-0.85577	-0.00049276	0.86736	0.00049943	0.011595	6.6765E-06	575.8091876136215	37.501	0.78152	37.477	37.126	37.908	-0.023979					36	17	3	0	0	0	0.17181	3	2467	2467;2479;2489		79.713	28.377	1	271290			5756	4662	4004	4010	6389;6390;6391	6389					0.034170932978668134
EEAEIIRKY	9	Unmodified	_EEAEIIRKY_					0	0	0		ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226549163-226553858:-|nuORF;ENST00000413631.1_1_13:111591276-111591579:+|nuORF	ENSG00000143799|ENST00000366794|PARP1	ENSG00000143799|ENST00000366794|PARP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8087768554688	2	575.808771	1149.60299	-0.72954	-0.00042008	0.63182	0.00036381	-0.097719	-5.6268E-05	575.8091320270833	37.446	0.75306	37.394	37.05	37.803	-0.052689					39	16	4	0	0	0	0.58668	1	2551	2551		47.657	6.8792	1	242790			5757	4662	4004	4010	6392	6392					0.034170932978668134
EEAEIIRKY	9	Unmodified	_EEAEIIRKY_					0	0	0		ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226549163-226553858:-|nuORF;ENST00000413631.1_1_13:111591276-111591579:+|nuORF	ENSG00000143799|ENST00000366794|PARP1	ENSG00000143799|ENST00000366794|PARP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8082275390625	2	575.808771	1149.60299	-1.2947	-0.00074548	1.0339	0.00059531	-0.2608	-0.00015017	575.8093189259149	37.365	0.70636	37.376	37.062	37.768	0.011173					37	15	3	0	0	0	0.15959	2	2486	2486;2500		82.241	21.269	1	250180			5758	4662	4004	4010	6393;6394	6393					0.034170932978668134
EEAELVKGR	9	Unmodified	_EEAELVKGR_					0	0	0		ENSG00000099260|ENST00000263174|PALMD	ENSG00000099260|ENST00000263174|PALMD	ENSG00000099260|ENST00000263174|PALMD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.32080078125	2	515.780013	1029.54547	0.12063	6.2219E-05	1.0965	0.00056556	1.2171	0.00062778	516.2837312317395	72.534	0.20659	73.088	72.984	73.191	0.55386					6	4	2	0	0	0	0.20789	1	8138	8138		19.997	9.7315	1	72523			5759	1751	4005	4011	6395	6395					0.03188251092274186
EEAENTLQSF	10	Unmodified	_EEAENTLQSF_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.2617797851562	2	584.26185	1166.50915	-0.79958	-0.00046717	0.6764	0.0003952	-0.12318	-7.1968E-05	584.2621456928146	60.756	0.74771	60.744	60.356	61.103	-0.012203					72	23	4	0	0	0	3.6510000000000002E-56	7	5636	5605;5615;5627;5636;5644;5652;5660		209.19	77.715	1	1147700			5760	869	4006	4012	6396;6397;6398;6399;6400;6401;6402	6399					-0.06744670595094249
EEAENTLQSF	10	Unmodified	_EEAENTLQSF_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.26171875	2	584.26185	1166.50915	0.59138	0.00034552	-0.47222	-0.0002759	0.11916	6.9618E-05	584.2614789996138	60.626	0.70366	60.593	60.284	60.987	-0.032509					63	20	4	0	0	0	5.7367E-86	7	5743	5708;5719;5729;5736;5743;5751;5760		223.88	88.93	1	1293800			5761	869	4006	4012	6403;6404;6405;6406;6407;6408;6409	6407					-0.06744670595094249
EEAENTLQSF	10	Unmodified	_EEAENTLQSF_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.2615356445312	2	584.26185	1166.50915	-1.8703	-0.0010928	1.6574	0.00096838	-0.21289	-0.00012438	584.2626862461325	60.598	0.73638	60.629	60.275	61.012	0.031197					67	22	4	0	0	0	1.0789E-103	6	5651	5622;5631;5643;5651;5660;5672		233.57	93.595	1	1332500			5762	869	4006	4012	6410;6411;6412;6413;6414;6415	6413					-0.06744670595094249
EEAKRLHRE	9	Unmodified	_EEAKRLHRE_					0	0	0		ENSG00000104738|ENST00000649973|MCM4	ENSG00000104738|ENST00000649973|MCM4	ENSG00000104738|ENST00000649973|MCM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.3176879882812	2	584.315086	1166.61562	-0.24339	-0.00014221	3.1264	0.0018268	2.883	0.0016846	584.316852294161	68.772	0.549	68.736	68.558	69.107	-0.036301					30	19	2	0	0	0	0.7932	1	6660	6660		24.519	1.9395	1	104620			5763	2144	4007	4013	6416	6416					0.03897549480757334
EEALILDNKY	10	Unmodified	_EEALILDNKY_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3146362304688	2	604.313886	1206.61322	-0.4888	-0.00029539	0.81223	0.00049084	0.32343	0.00019545	604.3142218463772	58.914	0.89325	58.9	58.5	59.393	-0.013729					86	29	4	0	0	0	1.092E-32	5	5374	5366;5374;5382;5389;5397		209.19	137.9	1	923680			5764	8189	4008	4014	6417;6418;6419;6420;6421	6418					0.018176562324242695
EEALILDNKY	10	Unmodified	_EEALILDNKY_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3140258789062	2	604.313886	1206.61322	0.44437	0.00026854	-0.13596	-8.2165E-05	0.3084	0.00018637	604.3136464197473	58.821	0.92606	58.791	58.431	59.357	-0.030884					84	28	4	0	0	0	2.3813E-24	5	5483	5468;5476;5483;5493;5504		213.85	123.07	1	1016900			5765	8189	4008	4014	6422;6423;6424;6425;6426	6424					0.018176562324242695
EEALILDNKY	10	Unmodified	_EEALILDNKY_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.31396484375	2	604.313886	1206.61322	-1.7921	-0.001083	2.0838	0.0012592	0.2917	0.00017628	604.3150530616688	58.746	0.90305	58.78	58.434	59.337	0.033905					82	28	4	0	0	0	3.5851E-17	5	5405	5382;5390;5398;5405;5415		204.42	97.417	1	982620			5766	8189	4008	4014	6427;6428;6429;6430;6431	6430					0.018176562324242695
EEALYVNPLDC	11	Unmodified	_EEALYVNPLDC_					0	0	0		ENSG00000113812|ENST00000335754|ACTR8;nc|ENSG00000113812|Q9H981-2|ACTR8	ENSG00000113812|ENST00000335754|ACTR8	ENSG00000113812|ENST00000335754|ACTR8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.7955932617188	2	633.289553	1264.56455	1.3461	0.00085247	1.933	0.0012241	3.2791	0.0020766	633.2906890354107	31.109	0.36106	31.172	30.992	31.353	0.063122					25	16	2	0	0	0	0.68532	1	1393	1393		33.922	3.3528	1	70583			5767	2748	4009	4015	6432	6432					-0.05714580398966973
EEALYVNPLDC	11	Unmodified	_EEALYVNPLDC_					0	0	0		ENSG00000113812|ENST00000335754|ACTR8;nc|ENSG00000113812|Q9H981-2|ACTR8	ENSG00000113812|ENST00000335754|ACTR8	ENSG00000113812|ENST00000335754|ACTR8	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	633.289553	1264.56455	0.3019	0.00019119	3.1273	0.0019805	3.4292	0.0021717	633.2915192525734	30.786	0.44163	30.897	30.679	31.121	0.11198	-0.1541	0.00077896	NaN	33.922	34	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82595			5768	2748	4009	4015							-0.05714580398966973
EEAPGCAQ	8	Unmodified	_EEAPGCAQ_					0	0	0			REV__nc|ENSG00000198788|Q02817|MUC2	REV__nc|ENSG00000198788|Q02817|MUC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.2129211425781	2	402.66326	803.311968	1.5987	0.00064374	0.59512	0.00023963	2.1938	0.00088337	402.66339004825363	33.251	0.38128	33.421	33.187	33.568	0.16971					13	8	2	0	0	0	0.4196	1	2398	2398		7.1934	3.2081	1	90232	+		5769	30151	4010	4016	6433	6433					-0.09755548618886678
EEAQPIVTKY	10	Unmodified	_EEAQPIVTKY_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.8116455078125	2	589.308603	1176.60265	-0.46834	-0.000276	-1.1859	-0.00069888	-1.6543	-0.00097488	589.3075332705231	43.899	0.52414	43.866	43.623	44.147	-0.03347					26	12	3	0	0	0	0.098191	2	3469	3469;3479		101.46	35.031	1	181300			5770	8635	4011	4017	6434;6435	6434					0.0214167357801216
EEAQPIVTKY	10	Unmodified	_EEAQPIVTKY_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3068237304688	2	589.308603	1176.60265	-2.0876	-0.0012303	0.11446	6.745E-05	-1.9732	-0.0011628	589.3084929856454	43.89	0.57647	43.888	43.67	44.246	-0.002449					27	14	3	0	0	0	0.63899	2	3396	3396;3417		47.96	7.514	1	181370			5771	8635	4011	4017	6436;6437	6436					0.0214167357801216
EEASLLHQF	9	Unmodified	_EEASLLHQF_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	537.2669067382812	2	537.266739	1072.51892	-0.12848	-6.903E-05	-0.27867	-0.00014972	-0.40715	-0.00021875	537.2664531140339	59.25	1.1059	59.237	58.717	59.823	-0.013729					58	32	3	0	0	0	0.18601	4	5427	5417;5427;5439;5449		76.774	30.802	1	460930			5772	2832	4012	4018	6438;6439;6440;6441	6439					-0.014434377990482972
EEASLLHQF	9	Unmodified	_EEASLLHQF_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.266357421875	2	537.266739	1072.51892	0.81623	0.00043853	-1.0078	-0.00054145	-0.19155	-0.00010292	537.2660704118458	59.178	1.0894	59.147	58.675	59.765	-0.030888					61	30	3	0	0	0	0.026451	2	5522	5522;5531		120.62	62.81	1	555740			5773	2832	4012	4018	6442;6443	6442					-0.014434377990482972
EEASLLHQF	9	Unmodified	_EEASLLHQF_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.2667236328125	2	537.266739	1072.51892	-0.47322	-0.00025425	0.31995	0.0001719	-0.15328	-8.235E-05	537.2667807229059	59.064	1.4116	59.098	58.581	59.993	0.033905					72	39	4	0	0	0	0.19818	3	5455	5433;5443;5455		74.255	18.751	1	512280			5774	2832	4012	4018	6444;6445;6446	6446					-0.014434377990482972
EEAVAGPWNW	10	Unmodified	_EEAVAGPWNW_					0	0	0		ENSG00000067445|ENST00000173898|TRO;ENST00000492706.5_1_X:54953428-54957450:+|nuORF;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO	ENSG00000067445|ENST00000173898|TRO	ENSG00000067445|ENST00000173898|TRO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.7949829101562	2	579.764363	1157.51417	-0.45922	-0.00026624	-3.6586	-0.0021211	-4.1178	-0.0023874	579.7619839932297	35.086	0.38571	35.334	35.091	35.477	0.24769					16	9	2	0	0	0	0.37624	1	2657	2657		47.657	3.5405	1	207130			5775	1184	4013	4019	6447	6447					-0.05828321941817194
EEAVLTAA	8	Unmodified	_EEAVLTAA_					0	0	0		ENST00000486499.1_1_16:31096429-31097399:-|nuORF;ENST00000533518.5_3_16:31095113-31102425:-|nuORF;ENSG00000151006|ENST00000280606|PRSS53	ENST00000486499.1_1_16:31096429-31097399:-|nuORF	ENST00000486499.1_1_16:31096429-31097399:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.21044921875	2	402.210901	802.407249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.903	1	22.963	22.463	23.463	0.060431								0	0	0	0.29568	1	730	730		35.201	8.4046	1				5776	5088	4014	4020	6448	6448					-0.001858721562143728
EECICSVLFGY	11	Unmodified	_EECICSVLFGY_					0	0	0		chr7:93468806-93472375|22|42.0|0.37|6.84|-|2|CALCR,CALCR|2	chr7:93468806-93472375|22|42.0|0.37|6.84|-|2|CALCR,CALCR|2	chr7:93468806-93472375|22|42.0|0.37|6.84|-|2|CALCR,CALCR|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.5213623046875	3	421.519242	1261.5359	-0.33221	-0.00014003	3.9464	0.0016635	3.6142	0.0015234	421.52073405574936	31.428	0.69798	31.377	31.127	31.825	-0.051031					37	15	4	0	0	0	0.75544	1	1763	1763		20.837	2.3061	1	94572			5777	508	4015	4021	6449	6449					-0.08441021299768181
EECYNVMCTL	10	Unmodified	_EECYNVMCTL_					0	0	0			REV__ENSG00000221926|ENST00000649191|TRIM16	REV__ENSG00000221926|ENST00000649191|TRIM16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	602.7362060546875	2	602.737785	1203.46102	0.44756	0.00026976	-4.2109	-0.002538	-3.7633	-0.0022683	602.7355969950997	38.003	1.3917	38.316	37.98	39.372	0.31312					87	34	5	0	0	0	0.54701	1	3093	3093		52.937	6.9645	1	3322600	+		5778	23716	4016	4022	6450	6450					-0.13257527102632594
EECYNVMCTL	10	Unmodified	_EECYNVMCTL_					0	0	0			REV__ENSG00000221926|ENST00000649191|TRIM16	REV__ENSG00000221926|ENST00000649191|TRIM16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	602.736083984375	2	602.737785	1203.46102	-0.056044	-3.378E-05	-2.9431	-0.0017739	-2.9991	-0.0018077	602.7359164757692	37.879	1.0662	38.402	38.138	39.204	0.52235					58	26	3	0	0	0	0.54701	2	3094	3083;3094		52.937	10.072	1	3412600	+		5779	23716	4016	4022	6451;6452	6452					-0.13257527102632594
EEDCAFEEE	9	Unmodified	_EEDCAFEEE_					0	0	0		ENSG00000162344|ENST00000294312|FGF19	ENSG00000162344|ENST00000294312|FGF19	ENSG00000162344|ENST00000294312|FGF19	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.689453125	2	550.689869	1099.36519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.651	1	15.709	15.209	16.209	0.057872								0	0	0	0.34348	1	58	58		16.473	0.83134	1				5780	5679	4017	4023	6453	6453					-0.18052260417562138
EEDEEDGMA	9	Unmodified	_EEDEEDGMA_					0	0	0			REV__ENSG00000130724|ENST00000312547|CHMP2A	REV__ENSG00000130724|ENST00000312547|CHMP2A	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.6754760742188	2	512.674219	1023.33389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.52	1	15.52	15.02	16.02	0								0	0	0	0.33676	1	37	37		18.324	3.4595	1		+		5781	18899	4018	4024	6454	6454					-0.17684833451630766
EEDEEEEDN	9	Unmodified	_EEDEEEEDN_					0	0	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.1937255859375	2	569.188745	1136.36294	0.40541	0.00023076	1.1268	0.00064138	1.5322	0.00087214	569.1893019499909	34.363	0.49744	34.401	34.183	34.68	0.038643					39	19	3	0	0	0	0.7932	1	1744	1744		25.574	0	1	107750			5782	2636	4019	4025	6455	6455					-0.19979017621653838
EEDFPEES	8	Unmodified	_EEDFPEES_					0	0	0		ENSG00000206559|ENST00000383768|ZCWPW2	ENSG00000206559|ENST00000383768|ZCWPW2	ENSG00000206559|ENST00000383768|ZCWPW2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.1846923828125	2	491.18782	980.361086	-0.80776	-0.00039676	-3.9583	-0.0019443	-4.7661	-0.002341	491.1857359582236	64.612	1.4263	64.649	63.688	65.115	0.037849					82	51	2	0	0	0	0.85277	1	5730	5730		25.45	4.5032	1	104970			5783	8562	4020	4026	6456	6456					-0.12987981848937125
EEDPGTVIPKI	11	Unmodified	_EEDPGTVIPKI_					0	0	0			REV__nc|ENSG00000179397|Q5SY80-2|CATSPERE	REV__nc|ENSG00000179397|Q5SY80-2|CATSPERE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.8309326171875	2	599.321711	1196.62887	0.5273	0.00031602	0.72741	0.00043595	1.2547	0.00075198	599.3217465646096	59.463	0.68615	59.577	59.217	59.903	0.11396					33	19	2	0	0	0	0.53361	1	5095	5095		49.536	1.8787	1	238140	+		5784	22335	4021	4027	6457	6457					0.038419427494545744
EEDPVPQLGRY	11	Unmodified	_EEDPVPQLGRY_					0	0	0			REV__nc|ENSG00000168268|Q9H857-4|NT5DC2	REV__nc|ENSG00000168268|Q9H857-4|NT5DC2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.8821716308594	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.77	1	114.75	114.25	115.25	-0.024452								0	0	0	0.56276	1	12721	12721		21.78	0.94327	1		+		5785	21474	4022	4028	6458	6458					-0.013567270243584062
EEDYAAIKRK	10	Unmodified	_EEDYAAIKRK_					0	0	0			REV__ENSG00000130038|ENST00000440314|CRACR2A	REV__ENSG00000130038|ENST00000440314|CRACR2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.9316101074219	3	408.21906	1221.63535	0.24512	0.00010006	4.1657	0.0017005	4.4109	0.0018006	408.2206682304326	28.577	0.35678	28.48	28.225	28.582	-0.096947					12	8	2	0	0	0	0.37624	1	1712	1712		12.957	0	1	66941	+		5786	18843	4023	4029	6459	6459					0.03339880700832509
EEDYWGARY	9	Unmodified	_EEDYWGARY_					0	0	0			REV__nc|ENSG00000169871|Q9BRZ2-3|TRIM56	REV__nc|ENSG00000169871|Q9BRZ2-3|TRIM56	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	594.7488403320312	2	594.751453	1187.48835	-1.7929	-0.0010663	-2.1128	-0.0012566	-3.9057	-0.0023229	594.7500749736099	45.235	1.1305	45.231	44.576	45.706	-0.0041618					61	25	3	0	0	0	0.78983	1	3591	3591		27.882	2.3082	1	279020	+		5787	21609	4024	4030	6460	6460					-0.09789216184094585
EEEDDHMEYC	10	Unmodified	_EEEDDHMEYC_					0	0	0		nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170004|Q12873-2|CHD3;ENSG00000170004|ENST00000330494|CHD3	nc|ENSG00000170004|Q12873-3|CHD3	nc|ENSG00000170004|Q12873-3|CHD3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.780517578125	3	433.809521	1298.40673	0.10864	4.7128E-05	2.4819	0.0010767	2.5905	0.0011238	434.14625948910094	33.557	0.076668	33.511	33.466	33.542	-0.045815					4	2	2	0	0	0	0.37624	1	1635	1635		7.8045	6.0482	1	21444			5788	15087	4025	4031	6461	6461					-0.23053447720508302
EEEDEEMLSLR	11	Unmodified	_EEEDEEMLSLR_					0	0	0			REV__ENST00000492674.1_1_7:99809286-99811635:+|nuORF	REV__ENST00000492674.1_1_7:99809286-99811635:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.5358581542969	3	460.538018	1378.59223	-1.5756	-0.00072564	-3.5355	-0.0016282	-5.1111	-0.0023539	460.5365320506594	30.612	0.62018	30.641	30.362	30.982	0.028618					39	13	4	0	0	0	0.72892	1	2025	2025		26.75	3.3718	1	516150	+		5789	16531	4026	4032	6462	6462					-0.08192721929412983
EEEDGVPPTSE	11	Unmodified	_EEEDGVPPTSE_					0	0	0		nc|ENSG00000166317|Q9H987-2|SYNPO2L;ENSG00000166317|ENST00000394810|SYNPO2L	nc|ENSG00000166317|Q9H987-2|SYNPO2L	nc|ENSG00000166317|Q9H987-2|SYNPO2L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	594.7485961914062	2	594.748773	1187.48299	-0.38532	-0.00022917	1.3579	0.00080759	0.97256	0.00057843	594.7493560147313	45.255	1.2659	45.224	44.446	45.712	-0.031067					68	28	4	0	0	0	0.7434	1	3680	3680		23.523	0.48021	1	276520			5790	6176	4027	4033	6463	6463					-0.10324984557246353
EEEEARLKYEK	11	Unmodified	_EEEEARLKYEK_					0	0	0		ENST00000557684.5_1_12:25267803-25348012:-|nuORF;nc|ENSG00000118307|Q6TDU7-3|DNAI7;nc|ENSG00000118307|Q6TDU7|DNAI7;ENSG00000118307|ENST00000395987|DNAI7	ENST00000557684.5_1_12:25267803-25348012:-|nuORF	ENST00000557684.5_1_12:25267803-25348012:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	475.23944091796875	3	475.240301	1422.69907	-1.2581	-0.00059788	2.0731	0.00098524	0.81507	0.00038736	475.2412439112862	40.354	0.69707	40.311	39.965	40.662	-0.043697					32	16	3	0	0	0	0.69687	1	2966	2966		32.034	3.4574	1	115330			5791	3021	4028	4034	6464	6464					0.004631963472775169
EEEEEEEEE	9	Unmodified	_EEEEEEEEE_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000204209|Q9UER7-3|DAXX;ENSG00000166483|ENST00000450114|WEE1;ENSG00000189186|ENST00000451261|DCAF8L2;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;ENSG00000184828|ENST00000590800|ZBTB7C;ENSG00000114631|ENST00000342480|PODXL2;nc|ENSG00000114853|Q9UFB7-2|ZBTB47;ENSG00000125817|ENST00000379751|CENPB;ENST00000479481.5_1_10:99116853-99131081:-|nuORF;nc|ENSG00000008130|O95544-2|NADK;ENSG00000100401|ENST00000356244|RANGAP1;ENSG00000178662|ENST00000651982|CSRNP3;nc|ENSG00000204209|Q9UER7-5|DAXX;nc|ENSG00000182606|Q9UPV9-2|TRAK1;nc|ENSG00000204209|Q9UER7-4|DAXX;nc|ENSG00000204209|Q9UER7-2|DAXX;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;ENSG00000204209|ENST00000374542|DAXX;ENSG00000114853|ENST00000232974|ZBTB47;nc|ENSG00000130175|P14314-2|PRKCSH;nc|ENSG00000130175|P14314|PRKCSH;nc|ENSG00000178662|Q8WYN3-2|CSRNP3;ENSG00000105229|ENST00000262971|PIAS4;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000186660|Q96JP5-2|ZFP91;ENSG00000186660|ENST00000316059|ZFP91;nc|ENSG00000100353|O15371-3|EIF3D;ENSG00000130175|ENST00000677123|PRKCSH;nc|ENSG00000176834|Q8N0Z9-2|VSIG10;ENSG00000176834|ENST00000359236|VSIG10;ENSG00000100353|ENST00000216190|EIF3D;ENST00000475066.1_1_7:154759501-154775093:-|nuORF;nc|ENSG00000290292|Q8IX15|HOMEZ;nc|ENSG00000290292|Q8IX15-3|HOMEZ;ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|5|intron;nc|ENSG00000054267|Q4LE39-4|ARID4B;ENSG00000054267|ENST00000264183|ARID4B;ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000052749|Q5JTH9-3|RRP12;nc|ENSG00000052749|Q5JTH9-2|RRP12;ENSG00000186487|ENST00000647738|MYT1L;nc|ENSG00000186487|Q9UL68-4|MYT1L;nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000054267|Q4LE39-3|ARID4B;ENSG00000146216|ENST00000259750|TTBK1;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENSG00000108592|ENST00000427159|FTSJ3;ENSG00000134504|ENST00000580059|KCTD1;ENSG00000119041|ENST00000263956|GTF3C3;nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1;nc|ENSG00000155846|Q86YN6-5|PPARGC1B;nc|ENSG00000155846|Q86YN6-2|PPARGC1B;nc|ENSG00000155846|Q86YN6-6|PPARGC1B;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENSG00000155846|ENST00000309241|PPARGC1B;nc|ENSG00000070729|Q14028-4|CNGB1;ENSG00000141456|ENST00000572293|PELP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000114631|Q9NZ53-2|PODXL2;ENSG00000173660|ENST00000311672|UQCRH;ENST00000497589.1_1_2:220493286-220496728:+|nuORF;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;ENST00000585325.5_1_19:11557144-11558756:+|nuORF;ENST00000461789.1_1_20:23345881-23349399:+|nuORF;chr1:150229114-150235733|62|33.23|0.97|5.1|-|ENST00000629042|ANP32E,ANP32E;ENST00000580376.5_1_17:61901002-61901722:-|nuORF;ENST00000505904.1_1_3:42700310-42703020:+|nuORF;ENST00000477345.1_1_9:140086566-140087185:-|nuORF;ENST00000489842.1_1_9:135931263-135933364:+|nuORF;ENSG00000229674|ENST00000448797|H2AL3;ENST00000451509.5_1_22:37771856-37771958:-|nuORF;nc|ENSG00000143401|Q9BTT0-2|ANP32E;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;ENSG00000131116|ENST00000300811|ZNF428;nc|ENSG00000143401|Q9BTT0-3|ANP32E;ENST00000595368.5_1_19:39936232-39948556:+|nuORF;ENSG00000029993|ENST00000325307|HMGB3;ENST00000225328.9_2_17:3599414-3599678:-|nuORF;ENST00000592445.1_1_19:11558256-11558487:+|nuORF;ENST00000436786.1_1_9:22646290-22682618:+|nuORF;nc|ENSG00000174446|O75971-2|SNAPC5;ENST00000462193.2_1_7:99720491-99722508:+|nuORF;ENST00000568875.1_1_15:66786776-66787321:-|nuORF;ENST00000242505.10_1_10:74928045-74934468:+|nuORF;ENST00000486951.1_1_1:46769438-46774832:+|nuORF;ENST00000557589.1_1_12:56817199-56818568:-|nuORF;ENST00000237654.8_1_4:77987453-77996858:-|nuORF;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;ENST00000585540.1_1_19:11558256-11559107:+|nuORF;ENST00000533654.5_1_1:150192985-150202975:-|nuORF;ENSG00000233954|ENST00000696689|UQCRHL;ENSG00000178257|ENST00000327157|PRM3;ENSG00000174446|ENST00000316634|SNAPC5;ENSG00000197272|ENST00000356897|IL27;nc|ENSG00000105701|Q14318|FKBP8;nc|ENSG00000008130|O95544-3|NADK;ENSG00000198783|ENST00000361952|ZNF830;ENSG00000167525|ENST00000682792|PROCA1;ENSG00000185482|ENST00000332782|STAC3;nc|ENSG00000167525|Q8NCQ7|PROCA1;nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000105701|ENST00000608443|FKBP8;nc|ENSG00000156374|Q9BYE7-3|PCGF6;ENSG00000167778|ENST00000301463|SPRYD3;ENSG00000159387|ENST00000290552|IRX6;nc|ENSG00000105701|Q14318-3|FKBP8;ENSG00000100604|ENST00000216492|CHGA;ENSG00000186462|ENST00000373517|NAP1L2;ENSG00000008130|ENST00000341426|NADK;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;ENSG00000240682|ENST00000393295|ISY1;ENSG00000162992|ENST00000295108|NEUROD1;nc|ENSG00000132716|Q5TAQ9-2|DCAF8;ENSG00000143401|ENST00000583931|ANP32E;ENSG00000284395|ENST00000640283|PERCC1;ENST00000544835.7_1_19:18642981-18654375:-|nuORF;ENST00000491313.5_1_10:99116853-99127090:-|nuORF;nc|ENSG00000240682|Q9ULR0-1|ISY1;ENSG00000156374|ENST00000369847|PCGF6;nc|ENSG00000167525|Q8NCQ7-3|PROCA1;nc|ENSG00000167525|Q8NCQ7-2|PROCA1;ENSG00000183304|ENST00000381003|FAM9A;nc|ENSG00000240682|Q9ULR0-2|ISY1;nc|ENSG00000185482|Q96MF2-2|STAC3;nc|ENSG00000186462|Q9ULW6-2|NAP1L2;ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000170004|Q12873-3|CHD3;ENSG00000140836|ENST00000268489|ZFHX3;chr16:73456258-73680180|53|17.49|0.14|6.93|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73318336-73456003|47|12.38|0.07|7.55|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73257136-73318240|51|12.71|0.0|20.28|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73143831-73257047|49|21.06|0.1|7.71|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73131094-73143752|54|16.8|0.2|6.36|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73093598-73130968|46|12.0|0.08|7.25|-|ENST00000641206|ZFHX3,ZFHX3;ENSG00000158417|ENST00000289371|EIF5B;ENSG00000196132|ENST00000328439|MYT1;nc|ENSG00000196132|Q01538-2|MYT1;nc|ENSG00000114923|P48751-3|SLC4A3;ENSG00000114923|ENST00000358055|SLC4A3;ENSG00000139718|ENST00000604567|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|3|intron;nc|ENSG00000127152|Q9C0K0-2|BCL11B;ENSG00000127152|ENST00000357195|BCL11B;ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2;ENSG00000006118|ENST00000453848|TMEM132A;nc|ENSG00000006118|Q24JP5-2|TMEM132A;ENST00000540112.1_3_11:60703176-60704376:+|nuORF;nc|ENSG00000006118|Q24JP5-4|TMEM132A;ENSG00000161956|ENST00000321337|SENP3;nc|ENSG00000149970|Q8WXI2-4|CNKSR2;nc|ENSG00000149970|Q8WXI2-2|CNKSR2;nc|ENSG00000149970|Q8WXI2-5|CNKSR2;ENSG00000149970|ENST00000379510|CNKSR2;ENSG00000185614|ENST00000333323|INKA1;nc|ENSG00000185614|Q96EL1|INKA1;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-5|EP400;ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91|EP400;nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000008735|Q13387-2|MAPK8IP2;ENSG00000008735|ENST00000329492|MAPK8IP2;nc|ENSG00000008735|Q13387-3|MAPK8IP2;ENSG00000156860|ENST00000356166|FBRS;ENSG00000174348|ENST00000312553|PODN;nc|ENSG00000174348|Q7Z5L7-2|PODN;nc|ENSG00000174348|Q7Z5L7-3|PODN;nc|ENSG00000174348|Q7Z5L7-4|PODN;nc|ENSG00000005379|O95153-2|TSPOAP1;ENSG00000005379|ENST00000343736|TSPOAP1;nc|ENSG00000005379|O95153-3|TSPOAP1;ENST00000498157.1_1_1:109815480-109816293:+|nuORF;nc|ENSG00000116127|Q8TCU4-2|ALMS1;ENSG00000116127|ENST00000613296|ALMS1;nc|ENSG00000116127|Q8TCU4-3|ALMS1;ENSG00000143126|ENST00000271332|CELSR2;ENST00000489018.1_1_1:109815040-109816668:+|nuORF;ENSG00000006432|ENST00000554752|MAP3K9;nc|ENSG00000006432|P80192-4|MAP3K9;nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;ENSG00000008128|ENST00000404249|CDK11A;ENST00000598846.1_1_1:1636463-1654047:-|nuORF;nc|ENSG00000248333|P21127-10|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;ENSG00000248333|ENST00000341832|CDK11B;nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127-5|CDK11B;nc|ENSG00000248333|P21127|CDK11B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B;ENSG00000009954|ENST00000339594|BAZ1B;ENSG00000011451|ENST00000673675|WIZ;nc|ENSG00000011451|O95785|WIZ;nc|ENSG00000040633|Q9BUL5-3|PHF23;nc|ENSG00000040633|Q9BUL5-4|PHF23;ENSG00000040633|ENST00000320316|PHF23;ENSG00000052749|ENST00000370992|RRP12;nc|ENSG00000066248|Q8N5V2-2|NGEF;nc|ENSG00000066248|Q8N5V2-3|NGEF;ENSG00000066248|ENST00000264051|NGEF;nc|ENSG00000074356|Q53F19-2|NCBP3;ENSG00000074356|ENST00000389005|NCBP3;ENST00000434116.6_1_15:65916409-65944223:+|nuORF;nc|ENSG00000074621|O60721-3|SLC24A1;nc|ENSG00000074621|O60721-2|SLC24A1;ENSG00000074621|ENST00000261892|SLC24A1;ENSG00000080224|ENST00000389672|EPHA6;ENST00000511906.5_1_5:37379391-37721408:+|nuORF;ENSG00000082068|ENST00000265107|WDR70;nc|ENSG00000083896|Q96MU7-2|YTHDC1;ENSG00000083896|ENST00000344157|YTHDC1;ENSG00000085185|ENST00000540052|BCORL1;nc|ENSG00000085185|Q5H9F3-1|BCORL1;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN;ENSG00000092853|ENST00000318121|CLSPN;nc|ENSG00000102001|O60840-4|CACNA1F;nc|ENSG00000102001|O60840-6|CACNA1F;ENSG00000102001|ENST00000323022|CACNA1F;nc|ENSG00000102001|O60840|CACNA1F;nc|ENSG00000102001|O60840-5|CACNA1F;nc|ENSG00000102001|O60840-7|CACNA1F;nc|ENSG00000105227|Q9BXM0-3|PRX;ENST00000291825.11_2_19:40899875-40904000:-|nuORF;ENSG00000105227|ENST00000324001|PRX;ENSG00000110092|ENST00000227507|CCND1;ENSG00000110429|ENST00000265651|FBXO3;ENSG00000110811|ENST00000290510|P3H3;nc|ENSG00000110811|Q8I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EEEEEEEEE	9	Unmodified	_EEEEEEEEE_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000204209|Q9UER7-3|DAXX;ENSG00000166483|ENST00000450114|WEE1;ENSG00000189186|ENST00000451261|DCAF8L2;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;ENSG00000184828|ENST00000590800|ZBTB7C;ENSG00000114631|ENST00000342480|PODXL2;nc|ENSG00000114853|Q9UFB7-2|ZBTB47;ENSG00000125817|ENST00000379751|CENPB;ENST00000479481.5_1_10:99116853-99131081:-|nuORF;nc|ENSG00000008130|O95544-2|NADK;ENSG00000100401|ENST00000356244|RANGAP1;ENSG00000178662|ENST00000651982|CSRNP3;nc|ENSG00000204209|Q9UER7-5|DAXX;nc|ENSG00000182606|Q9UPV9-2|TRAK1;nc|ENSG00000204209|Q9UER7-4|DAXX;nc|ENSG00000204209|Q9UER7-2|DAXX;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;ENSG00000204209|ENST00000374542|DAXX;ENSG00000114853|ENST00000232974|ZBTB47;nc|ENSG00000130175|P14314-2|PRKCSH;nc|ENSG00000130175|P14314|PRKCSH;nc|ENSG00000178662|Q8WYN3-2|CSRNP3;ENSG00000105229|ENST00000262971|PIAS4;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000186660|Q96JP5-2|ZFP91;ENSG00000186660|ENST00000316059|ZFP91;nc|ENSG00000100353|O15371-3|EIF3D;ENSG00000130175|ENST00000677123|PRKCSH;nc|ENSG00000176834|Q8N0Z9-2|VSIG10;ENSG00000176834|ENST00000359236|VSIG10;ENSG00000100353|ENST00000216190|EIF3D;ENST00000475066.1_1_7:154759501-154775093:-|nuORF;nc|ENSG00000290292|Q8IX15|HOMEZ;nc|ENSG00000290292|Q8IX15-3|HOMEZ;ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|5|intron;nc|ENSG00000054267|Q4LE39-4|ARID4B;ENSG00000054267|ENST00000264183|ARID4B;ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000052749|Q5JTH9-3|RRP12;nc|ENSG00000052749|Q5JTH9-2|RRP12;ENSG00000186487|ENST00000647738|MYT1L;nc|ENSG00000186487|Q9UL68-4|MYT1L;nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000054267|Q4LE39-3|ARID4B;ENSG00000146216|ENST00000259750|TTBK1;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENSG00000108592|ENST00000427159|FTSJ3;ENSG00000134504|ENST00000580059|KCTD1;ENSG00000119041|ENST00000263956|GTF3C3;nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1;nc|ENSG00000155846|Q86YN6-5|PPARGC1B;nc|ENSG00000155846|Q86YN6-2|PPARGC1B;nc|ENSG00000155846|Q86YN6-6|PPARGC1B;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENSG00000155846|ENST00000309241|PPARGC1B;nc|ENSG00000070729|Q14028-4|CNGB1;ENSG00000141456|ENST00000572293|PELP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000114631|Q9NZ53-2|PODXL2;ENSG00000173660|ENST00000311672|UQCRH;ENST00000497589.1_1_2:220493286-220496728:+|nuORF;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;ENST00000585325.5_1_19:11557144-11558756:+|nuORF;ENST00000461789.1_1_20:23345881-23349399:+|nuORF;chr1:150229114-150235733|62|33.23|0.97|5.1|-|ENST00000629042|ANP32E,ANP32E;ENST00000580376.5_1_17:61901002-61901722:-|nuORF;ENST00000505904.1_1_3:42700310-42703020:+|nuORF;ENST00000477345.1_1_9:140086566-140087185:-|nuORF;ENST00000489842.1_1_9:135931263-135933364:+|nuORF;ENSG00000229674|ENST00000448797|H2AL3;ENST00000451509.5_1_22:37771856-37771958:-|nuORF;nc|ENSG00000143401|Q9BTT0-2|ANP32E;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;ENSG00000131116|ENST00000300811|ZNF428;nc|ENSG00000143401|Q9BTT0-3|ANP32E;ENST00000595368.5_1_19:39936232-39948556:+|nuORF;ENSG00000029993|ENST00000325307|HMGB3;ENST00000225328.9_2_17:3599414-3599678:-|nuORF;ENST00000592445.1_1_19:11558256-11558487:+|nuORF;ENST00000436786.1_1_9:22646290-22682618:+|nuORF;nc|ENSG00000174446|O75971-2|SNAPC5;ENST00000462193.2_1_7:99720491-99722508:+|nuORF;ENST00000568875.1_1_15:66786776-66787321:-|nuORF;ENST00000242505.10_1_10:74928045-74934468:+|nuORF;ENST00000486951.1_1_1:46769438-46774832:+|nuORF;ENST00000557589.1_1_12:56817199-56818568:-|nuORF;ENST00000237654.8_1_4:77987453-77996858:-|nuORF;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;ENST00000585540.1_1_19:11558256-11559107:+|nuORF;ENST00000533654.5_1_1:150192985-150202975:-|nuORF;ENSG00000233954|ENST00000696689|UQCRHL;ENSG00000178257|ENST00000327157|PRM3;ENSG00000174446|ENST00000316634|SNAPC5;ENSG00000197272|ENST00000356897|IL27;nc|ENSG00000105701|Q14318|FKBP8;nc|ENSG00000008130|O95544-3|NADK;ENSG00000198783|ENST00000361952|ZNF830;ENSG00000167525|ENST00000682792|PROCA1;ENSG00000185482|ENST00000332782|STAC3;nc|ENSG00000167525|Q8NCQ7|PROCA1;nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000105701|ENST00000608443|FKBP8;nc|ENSG00000156374|Q9BYE7-3|PCGF6;ENSG00000167778|ENST00000301463|SPRYD3;ENSG00000159387|ENST00000290552|IRX6;nc|ENSG00000105701|Q14318-3|FKBP8;ENSG00000100604|ENST00000216492|CHGA;ENSG00000186462|ENST00000373517|NAP1L2;ENSG00000008130|ENST00000341426|NADK;ENST00000476241.2_2_1:245025757-245027609:-|nuO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EEEEEEEEE	9	Unmodified	_EEEEEEEEE_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000204209|Q9UER7-3|DAXX;ENSG00000166483|ENST00000450114|WEE1;ENSG00000189186|ENST00000451261|DCAF8L2;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;ENSG00000184828|ENST00000590800|ZBTB7C;ENSG00000114631|ENST00000342480|PODXL2;nc|ENSG00000114853|Q9UFB7-2|ZBTB47;ENSG00000125817|ENST00000379751|CENPB;ENST00000479481.5_1_10:99116853-99131081:-|nuORF;nc|ENSG00000008130|O95544-2|NADK;ENSG00000100401|ENST00000356244|RANGAP1;ENSG00000178662|ENST00000651982|CSRNP3;nc|ENSG00000204209|Q9UER7-5|DAXX;nc|ENSG00000182606|Q9UPV9-2|TRAK1;nc|ENSG00000204209|Q9UER7-4|DAXX;nc|ENSG00000204209|Q9UER7-2|DAXX;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;ENSG00000204209|ENST00000374542|DAXX;ENSG00000114853|ENST00000232974|ZBTB47;nc|ENSG00000130175|P14314-2|PRKCSH;nc|ENSG00000130175|P14314|PRKCSH;nc|ENSG00000178662|Q8WYN3-2|CSRNP3;ENSG00000105229|ENST00000262971|PIAS4;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000186660|Q96JP5-2|ZFP91;ENSG00000186660|ENST00000316059|ZFP91;nc|ENSG00000100353|O15371-3|EIF3D;ENSG00000130175|ENST00000677123|PRKCSH;nc|ENSG00000176834|Q8N0Z9-2|VSIG10;ENSG00000176834|ENST00000359236|VSIG10;ENSG00000100353|ENST00000216190|EIF3D;ENST00000475066.1_1_7:154759501-154775093:-|nuORF;nc|ENSG00000290292|Q8IX15|HOMEZ;nc|ENSG00000290292|Q8IX15-3|HOMEZ;ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|5|intron;nc|ENSG00000054267|Q4LE39-4|ARID4B;ENSG00000054267|ENST00000264183|ARID4B;ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000052749|Q5JTH9-3|RRP12;nc|ENSG00000052749|Q5JTH9-2|RRP12;ENSG00000186487|ENST00000647738|MYT1L;nc|ENSG00000186487|Q9UL68-4|MYT1L;nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000054267|Q4LE39-3|ARID4B;ENSG00000146216|ENST00000259750|TTBK1;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENSG00000108592|ENST00000427159|FTSJ3;ENSG00000134504|ENST00000580059|KCTD1;ENSG00000119041|ENST00000263956|GTF3C3;nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1;nc|ENSG00000155846|Q86YN6-5|PPARGC1B;nc|ENSG00000155846|Q86YN6-2|PPARGC1B;nc|ENSG00000155846|Q86YN6-6|PPARGC1B;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENSG00000155846|ENST00000309241|PPARGC1B;nc|ENSG00000070729|Q14028-4|CNGB1;ENSG00000141456|ENST00000572293|PELP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000114631|Q9NZ53-2|PODXL2;ENSG00000173660|ENST00000311672|UQCRH;ENST00000497589.1_1_2:220493286-220496728:+|nuORF;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;ENST00000585325.5_1_19:11557144-11558756:+|nuORF;ENST00000461789.1_1_20:23345881-23349399:+|nuORF;chr1:150229114-150235733|62|33.23|0.97|5.1|-|ENST00000629042|ANP32E,ANP32E;ENST00000580376.5_1_17:61901002-61901722:-|nuORF;ENST00000505904.1_1_3:42700310-42703020:+|nuORF;ENST00000477345.1_1_9:140086566-140087185:-|nuORF;ENST00000489842.1_1_9:135931263-135933364:+|nuORF;ENSG00000229674|ENST00000448797|H2AL3;ENST00000451509.5_1_22:37771856-37771958:-|nuORF;nc|ENSG00000143401|Q9BTT0-2|ANP32E;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;ENSG00000131116|ENST00000300811|ZNF428;nc|ENSG00000143401|Q9BTT0-3|ANP32E;ENST00000595368.5_1_19:39936232-39948556:+|nuORF;ENSG00000029993|ENST00000325307|HMGB3;ENST00000225328.9_2_17:3599414-3599678:-|nuORF;ENST00000592445.1_1_19:11558256-11558487:+|nuORF;ENST00000436786.1_1_9:22646290-22682618:+|nuORF;nc|ENSG00000174446|O75971-2|SNAPC5;ENST00000462193.2_1_7:99720491-99722508:+|nuORF;ENST00000568875.1_1_15:66786776-66787321:-|nuORF;ENST00000242505.10_1_10:74928045-74934468:+|nuORF;ENST00000486951.1_1_1:46769438-46774832:+|nuORF;ENST00000557589.1_1_12:56817199-56818568:-|nuORF;ENST00000237654.8_1_4:77987453-77996858:-|nuORF;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;ENST00000585540.1_1_19:11558256-11559107:+|nuORF;ENST00000533654.5_1_1:150192985-150202975:-|nuORF;ENSG00000233954|ENST00000696689|UQCRHL;ENSG00000178257|ENST00000327157|PRM3;ENSG00000174446|ENST00000316634|SNAPC5;ENSG00000197272|ENST00000356897|IL27;nc|ENSG00000105701|Q14318|FKBP8;nc|ENSG00000008130|O95544-3|NADK;ENSG00000198783|ENST00000361952|ZNF830;ENSG00000167525|ENST00000682792|PROCA1;ENSG00000185482|ENST00000332782|STAC3;nc|ENSG00000167525|Q8NCQ7|PROCA1;nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000105701|ENST00000608443|FKBP8;nc|ENSG00000156374|Q9BYE7-3|PCGF6;ENSG00000167778|ENST00000301463|SPRYD3;ENSG00000159387|ENST00000290552|IRX6;nc|ENSG00000105701|Q14318-3|FKBP8;ENSG00000100604|ENST00000216492|CHGA;ENSG00000186462|ENST00000373517|NAP1L2;ENSG00000008130|ENST00000341426|NADK;ENST00000476241.2_2_1:245025757-245027609:-|nuO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EEEEEEEEE	9	Unmodified	_EEEEEEEEE_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000204209|Q9UER7-3|DAXX;ENSG00000166483|ENST00000450114|WEE1;ENSG00000189186|ENST00000451261|DCAF8L2;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;ENSG00000184828|ENST00000590800|ZBTB7C;ENSG00000114631|ENST00000342480|PODXL2;nc|ENSG00000114853|Q9UFB7-2|ZBTB47;ENSG00000125817|ENST00000379751|CENPB;ENST00000479481.5_1_10:99116853-99131081:-|nuORF;nc|ENSG00000008130|O95544-2|NADK;ENSG00000100401|ENST00000356244|RANGAP1;ENSG00000178662|ENST00000651982|CSRNP3;nc|ENSG00000204209|Q9UER7-5|DAXX;nc|ENSG00000182606|Q9UPV9-2|TRAK1;nc|ENSG00000204209|Q9UER7-4|DAXX;nc|ENSG00000204209|Q9UER7-2|DAXX;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;ENSG00000204209|ENST00000374542|DAXX;ENSG00000114853|ENST00000232974|ZBTB47;nc|ENSG00000130175|P14314-2|PRKCSH;nc|ENSG00000130175|P14314|PRKCSH;nc|ENSG00000178662|Q8WYN3-2|CSRNP3;ENSG00000105229|ENST00000262971|PIAS4;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000186660|Q96JP5-2|ZFP91;ENSG00000186660|ENST00000316059|ZFP91;nc|ENSG00000100353|O15371-3|EIF3D;ENSG00000130175|ENST00000677123|PRKCSH;nc|ENSG00000176834|Q8N0Z9-2|VSIG10;ENSG00000176834|ENST00000359236|VSIG10;ENSG00000100353|ENST00000216190|EIF3D;ENST00000475066.1_1_7:154759501-154775093:-|nuORF;nc|ENSG00000290292|Q8IX15|HOMEZ;nc|ENSG00000290292|Q8IX15-3|HOMEZ;ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|5|intron;nc|ENSG00000054267|Q4LE39-4|ARID4B;ENSG00000054267|ENST00000264183|ARID4B;ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000052749|Q5JTH9-3|RRP12;nc|ENSG00000052749|Q5JTH9-2|RRP12;ENSG00000186487|ENST00000647738|MYT1L;nc|ENSG00000186487|Q9UL68-4|MYT1L;nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000054267|Q4LE39-3|ARID4B;ENSG00000146216|ENST00000259750|TTBK1;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENSG00000108592|ENST00000427159|FTSJ3;ENSG00000134504|ENST00000580059|KCTD1;ENSG00000119041|ENST00000263956|GTF3C3;nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1;nc|ENSG00000155846|Q86YN6-5|PPARGC1B;nc|ENSG00000155846|Q86YN6-2|PPARGC1B;nc|ENSG00000155846|Q86YN6-6|PPARGC1B;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENSG00000155846|ENST00000309241|PPARGC1B;nc|ENSG00000070729|Q14028-4|CNGB1;ENSG00000141456|ENST00000572293|PELP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000114631|Q9NZ53-2|PODXL2;ENSG00000173660|ENST00000311672|UQCRH;ENST00000497589.1_1_2:220493286-220496728:+|nuORF;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;ENST00000585325.5_1_19:11557144-11558756:+|nuORF;ENST00000461789.1_1_20:23345881-23349399:+|nuORF;chr1:150229114-150235733|62|33.23|0.97|5.1|-|ENST00000629042|ANP32E,ANP32E;ENST00000580376.5_1_17:61901002-61901722:-|nuORF;ENST00000505904.1_1_3:42700310-42703020:+|nuORF;ENST00000477345.1_1_9:140086566-140087185:-|nuORF;ENST00000489842.1_1_9:135931263-135933364:+|nuORF;ENSG00000229674|ENST00000448797|H2AL3;ENST00000451509.5_1_22:37771856-37771958:-|nuORF;nc|ENSG00000143401|Q9BTT0-2|ANP32E;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;ENSG00000131116|ENST00000300811|ZNF428;nc|ENSG00000143401|Q9BTT0-3|ANP32E;ENST00000595368.5_1_19:39936232-39948556:+|nuORF;ENSG00000029993|ENST00000325307|HMGB3;ENST00000225328.9_2_17:3599414-3599678:-|nuORF;ENST00000592445.1_1_19:11558256-11558487:+|nuORF;ENST00000436786.1_1_9:22646290-22682618:+|nuORF;nc|ENSG00000174446|O75971-2|SNAPC5;ENST00000462193.2_1_7:99720491-99722508:+|nuORF;ENST00000568875.1_1_15:66786776-66787321:-|nuORF;ENST00000242505.10_1_10:74928045-74934468:+|nuORF;ENST00000486951.1_1_1:46769438-46774832:+|nuORF;ENST00000557589.1_1_12:56817199-56818568:-|nuORF;ENST00000237654.8_1_4:77987453-77996858:-|nuORF;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;ENST00000585540.1_1_19:11558256-11559107:+|nuORF;ENST00000533654.5_1_1:150192985-150202975:-|nuORF;ENSG00000233954|ENST00000696689|UQCRHL;ENSG00000178257|ENST00000327157|PRM3;ENSG00000174446|ENST00000316634|SNAPC5;ENSG00000197272|ENST00000356897|IL27;nc|ENSG00000105701|Q14318|FKBP8;nc|ENSG00000008130|O95544-3|NADK;ENSG00000198783|ENST00000361952|ZNF830;ENSG00000167525|ENST00000682792|PROCA1;ENSG00000185482|ENST00000332782|STAC3;nc|ENSG00000167525|Q8NCQ7|PROCA1;nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000105701|ENST00000608443|FKBP8;nc|ENSG00000156374|Q9BYE7-3|PCGF6;ENSG00000167778|ENST00000301463|SPRYD3;ENSG00000159387|ENST00000290552|IRX6;nc|ENSG00000105701|Q14318-3|FKBP8;ENSG00000100604|ENST00000216492|CHGA;ENSG00000186462|ENST00000373517|NAP1L2;ENSG00000008130|ENST00000341426|NADK;ENST00000476241.2_2_1:245025757-245027609:-|nuO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EEEEEEEEE	9	Unmodified	_EEEEEEEEE_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000204209|Q9UER7-3|DAXX;ENSG00000166483|ENST00000450114|WEE1;ENSG00000189186|ENST00000451261|DCAF8L2;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;ENSG00000184828|ENST00000590800|ZBTB7C;ENSG00000114631|ENST00000342480|PODXL2;nc|ENSG00000114853|Q9UFB7-2|ZBTB47;ENSG00000125817|ENST00000379751|CENPB;ENST00000479481.5_1_10:99116853-99131081:-|nuORF;nc|ENSG00000008130|O95544-2|NADK;ENSG00000100401|ENST00000356244|RANGAP1;ENSG00000178662|ENST00000651982|CSRNP3;nc|ENSG00000204209|Q9UER7-5|DAXX;nc|ENSG00000182606|Q9UPV9-2|TRAK1;nc|ENSG00000204209|Q9UER7-4|DAXX;nc|ENSG00000204209|Q9UER7-2|DAXX;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;ENSG00000204209|ENST00000374542|DAXX;ENSG00000114853|ENST00000232974|ZBTB47;nc|ENSG00000130175|P14314-2|PRKCSH;nc|ENSG00000130175|P14314|PRKCSH;nc|ENSG00000178662|Q8WYN3-2|CSRNP3;ENSG00000105229|ENST00000262971|PIAS4;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000186660|Q96JP5-2|ZFP91;ENSG00000186660|ENST00000316059|ZFP91;nc|ENSG00000100353|O15371-3|EIF3D;ENSG00000130175|ENST00000677123|PRKCSH;nc|ENSG00000176834|Q8N0Z9-2|VSIG10;ENSG00000176834|ENST00000359236|VSIG10;ENSG00000100353|ENST00000216190|EIF3D;ENST00000475066.1_1_7:154759501-154775093:-|nuORF;nc|ENSG00000290292|Q8IX15|HOMEZ;nc|ENSG00000290292|Q8IX15-3|HOMEZ;ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|5|intron;nc|ENSG00000054267|Q4LE39-4|ARID4B;ENSG00000054267|ENST00000264183|ARID4B;ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000052749|Q5JTH9-3|RRP12;nc|ENSG00000052749|Q5JTH9-2|RRP12;ENSG00000186487|ENST00000647738|MYT1L;nc|ENSG00000186487|Q9UL68-4|MYT1L;nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000054267|Q4LE39-3|ARID4B;ENSG00000146216|ENST00000259750|TTBK1;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENSG00000108592|ENST00000427159|FTSJ3;ENSG00000134504|ENST00000580059|KCTD1;ENSG00000119041|ENST00000263956|GTF3C3;nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1;nc|ENSG00000155846|Q86YN6-5|PPARGC1B;nc|ENSG00000155846|Q86YN6-2|PPARGC1B;nc|ENSG00000155846|Q86YN6-6|PPARGC1B;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENSG00000155846|ENST00000309241|PPARGC1B;nc|ENSG00000070729|Q14028-4|CNGB1;ENSG00000141456|ENST00000572293|PELP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000114631|Q9NZ53-2|PODXL2;ENSG00000173660|ENST00000311672|UQCRH;ENST00000497589.1_1_2:220493286-220496728:+|nuORF;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;ENST00000585325.5_1_19:11557144-11558756:+|nuORF;ENST00000461789.1_1_20:23345881-23349399:+|nuORF;chr1:150229114-150235733|62|33.23|0.97|5.1|-|ENST00000629042|ANP32E,ANP32E;ENST00000580376.5_1_17:61901002-61901722:-|nuORF;ENST00000505904.1_1_3:42700310-42703020:+|nuORF;ENST00000477345.1_1_9:140086566-140087185:-|nuORF;ENST00000489842.1_1_9:135931263-135933364:+|nuORF;ENSG00000229674|ENST00000448797|H2AL3;ENST00000451509.5_1_22:37771856-37771958:-|nuORF;nc|ENSG00000143401|Q9BTT0-2|ANP32E;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;ENSG00000131116|ENST00000300811|ZNF428;nc|ENSG00000143401|Q9BTT0-3|ANP32E;ENST00000595368.5_1_19:39936232-39948556:+|nuORF;ENSG00000029993|ENST00000325307|HMGB3;ENST00000225328.9_2_17:3599414-3599678:-|nuORF;ENST00000592445.1_1_19:11558256-11558487:+|nuORF;ENST00000436786.1_1_9:22646290-22682618:+|nuORF;nc|ENSG00000174446|O75971-2|SNAPC5;ENST00000462193.2_1_7:99720491-99722508:+|nuORF;ENST00000568875.1_1_15:66786776-66787321:-|nuORF;ENST00000242505.10_1_10:74928045-74934468:+|nuORF;ENST00000486951.1_1_1:46769438-46774832:+|nuORF;ENST00000557589.1_1_12:56817199-56818568:-|nuORF;ENST00000237654.8_1_4:77987453-77996858:-|nuORF;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;ENST00000585540.1_1_19:11558256-11559107:+|nuORF;ENST00000533654.5_1_1:150192985-150202975:-|nuORF;ENSG00000233954|ENST00000696689|UQCRHL;ENSG00000178257|ENST00000327157|PRM3;ENSG00000174446|ENST00000316634|SNAPC5;ENSG00000197272|ENST00000356897|IL27;nc|ENSG00000105701|Q14318|FKBP8;nc|ENSG00000008130|O95544-3|NADK;ENSG00000198783|ENST00000361952|ZNF830;ENSG00000167525|ENST00000682792|PROCA1;ENSG00000185482|ENST00000332782|STAC3;nc|ENSG00000167525|Q8NCQ7|PROCA1;nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000105701|ENST00000608443|FKBP8;nc|ENSG00000156374|Q9BYE7-3|PCGF6;ENSG00000167778|ENST00000301463|SPRYD3;ENSG00000159387|ENST00000290552|IRX6;nc|ENSG00000105701|Q14318-3|FKBP8;ENSG00000100604|ENST00000216492|CHGA;ENSG00000186462|ENST00000373517|NAP1L2;ENSG00000008130|ENST00000341426|NADK;ENST00000476241.2_2_1:245025757-245027609:-|nuO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EEEEEEEEE	9	Unmodified	_EEEEEEEEE_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000204209|Q9UER7-3|DAXX;ENSG00000166483|ENST00000450114|WEE1;ENSG00000189186|ENST00000451261|DCAF8L2;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;ENSG00000184828|ENST00000590800|ZBTB7C;ENSG00000114631|ENST00000342480|PODXL2;nc|ENSG00000114853|Q9UFB7-2|ZBTB47;ENSG00000125817|ENST00000379751|CENPB;ENST00000479481.5_1_10:99116853-99131081:-|nuORF;nc|ENSG00000008130|O95544-2|NADK;ENSG00000100401|ENST00000356244|RANGAP1;ENSG00000178662|ENST00000651982|CSRNP3;nc|ENSG00000204209|Q9UER7-5|DAXX;nc|ENSG00000182606|Q9UPV9-2|TRAK1;nc|ENSG00000204209|Q9UER7-4|DAXX;nc|ENSG00000204209|Q9UER7-2|DAXX;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;ENSG00000204209|ENST00000374542|DAXX;ENSG00000114853|ENST00000232974|ZBTB47;nc|ENSG00000130175|P14314-2|PRKCSH;nc|ENSG00000130175|P14314|PRKCSH;nc|ENSG00000178662|Q8WYN3-2|CSRNP3;ENSG00000105229|ENST00000262971|PIAS4;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000186660|Q96JP5-2|ZFP91;ENSG00000186660|ENST00000316059|ZFP91;nc|ENSG00000100353|O15371-3|EIF3D;ENSG00000130175|ENST00000677123|PRKCSH;nc|ENSG00000176834|Q8N0Z9-2|VSIG10;ENSG00000176834|ENST00000359236|VSIG10;ENSG00000100353|ENST00000216190|EIF3D;ENST00000475066.1_1_7:154759501-154775093:-|nuORF;nc|ENSG00000290292|Q8IX15|HOMEZ;nc|ENSG00000290292|Q8IX15-3|HOMEZ;ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|5|intron;nc|ENSG00000054267|Q4LE39-4|ARID4B;ENSG00000054267|ENST00000264183|ARID4B;ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000052749|Q5JTH9-3|RRP12;nc|ENSG00000052749|Q5JTH9-2|RRP12;ENSG00000186487|ENST00000647738|MYT1L;nc|ENSG00000186487|Q9UL68-4|MYT1L;nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000054267|Q4LE39-3|ARID4B;ENSG00000146216|ENST00000259750|TTBK1;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENSG00000108592|ENST00000427159|FTSJ3;ENSG00000134504|ENST00000580059|KCTD1;ENSG00000119041|ENST00000263956|GTF3C3;nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1;nc|ENSG00000155846|Q86YN6-5|PPARGC1B;nc|ENSG00000155846|Q86YN6-2|PPARGC1B;nc|ENSG00000155846|Q86YN6-6|PPARGC1B;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENSG00000155846|ENST00000309241|PPARGC1B;nc|ENSG00000070729|Q14028-4|CNGB1;ENSG00000141456|ENST00000572293|PELP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000114631|Q9NZ53-2|PODXL2;ENSG00000173660|ENST00000311672|UQCRH;ENST00000497589.1_1_2:220493286-220496728:+|nuORF;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;ENST00000585325.5_1_19:11557144-11558756:+|nuORF;ENST00000461789.1_1_20:23345881-23349399:+|nuORF;chr1:150229114-150235733|62|33.23|0.97|5.1|-|ENST00000629042|ANP32E,ANP32E;ENST00000580376.5_1_17:61901002-61901722:-|nuORF;ENST00000505904.1_1_3:42700310-42703020:+|nuORF;ENST00000477345.1_1_9:140086566-140087185:-|nuORF;ENST00000489842.1_1_9:135931263-135933364:+|nuORF;ENSG00000229674|ENST00000448797|H2AL3;ENST00000451509.5_1_22:37771856-37771958:-|nuORF;nc|ENSG00000143401|Q9BTT0-2|ANP32E;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;ENSG00000131116|ENST00000300811|ZNF428;nc|ENSG00000143401|Q9BTT0-3|ANP32E;ENST00000595368.5_1_19:39936232-39948556:+|nuORF;ENSG00000029993|ENST00000325307|HMGB3;ENST00000225328.9_2_17:3599414-3599678:-|nuORF;ENST00000592445.1_1_19:11558256-11558487:+|nuORF;ENST00000436786.1_1_9:22646290-22682618:+|nuORF;nc|ENSG00000174446|O75971-2|SNAPC5;ENST00000462193.2_1_7:99720491-99722508:+|nuORF;ENST00000568875.1_1_15:66786776-66787321:-|nuORF;ENST00000242505.10_1_10:74928045-74934468:+|nuORF;ENST00000486951.1_1_1:46769438-46774832:+|nuORF;ENST00000557589.1_1_12:56817199-56818568:-|nuORF;ENST00000237654.8_1_4:77987453-77996858:-|nuORF;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;ENST00000585540.1_1_19:11558256-11559107:+|nuORF;ENST00000533654.5_1_1:150192985-150202975:-|nuORF;ENSG00000233954|ENST00000696689|UQCRHL;ENSG00000178257|ENST00000327157|PRM3;ENSG00000174446|ENST00000316634|SNAPC5;ENSG00000197272|ENST00000356897|IL27;nc|ENSG00000105701|Q14318|FKBP8;nc|ENSG00000008130|O95544-3|NADK;ENSG00000198783|ENST00000361952|ZNF830;ENSG00000167525|ENST00000682792|PROCA1;ENSG00000185482|ENST00000332782|STAC3;nc|ENSG00000167525|Q8NCQ7|PROCA1;nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000105701|ENST00000608443|FKBP8;nc|ENSG00000156374|Q9BYE7-3|PCGF6;ENSG00000167778|ENST00000301463|SPRYD3;ENSG00000159387|ENST00000290552|IRX6;nc|ENSG00000105701|Q14318-3|FKBP8;ENSG00000100604|ENST00000216492|CHGA;ENSG00000186462|ENST00000373517|NAP1L2;ENSG00000008130|ENST00000341426|NADK;ENST00000476241.2_2_1:245025757-245027609:-|nuO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EEEEEEEEE	9	Unmodified	_EEEEEEEEE_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000204209|Q9UER7-3|DAXX;ENSG00000166483|ENST00000450114|WEE1;ENSG00000189186|ENST00000451261|DCAF8L2;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;ENSG00000184828|ENST00000590800|ZBTB7C;ENSG00000114631|ENST00000342480|PODXL2;nc|ENSG00000114853|Q9UFB7-2|ZBTB47;ENSG00000125817|ENST00000379751|CENPB;ENST00000479481.5_1_10:99116853-99131081:-|nuORF;nc|ENSG00000008130|O95544-2|NADK;ENSG00000100401|ENST00000356244|RANGAP1;ENSG00000178662|ENST00000651982|CSRNP3;nc|ENSG00000204209|Q9UER7-5|DAXX;nc|ENSG00000182606|Q9UPV9-2|TRAK1;nc|ENSG00000204209|Q9UER7-4|DAXX;nc|ENSG00000204209|Q9UER7-2|DAXX;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;ENSG00000204209|ENST00000374542|DAXX;ENSG00000114853|ENST00000232974|ZBTB47;nc|ENSG00000130175|P14314-2|PRKCSH;nc|ENSG00000130175|P14314|PRKCSH;nc|ENSG00000178662|Q8WYN3-2|CSRNP3;ENSG00000105229|ENST00000262971|PIAS4;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000186660|Q96JP5-2|ZFP91;ENSG00000186660|ENST00000316059|ZFP91;nc|ENSG00000100353|O15371-3|EIF3D;ENSG00000130175|ENST00000677123|PRKCSH;nc|ENSG00000176834|Q8N0Z9-2|VSIG10;ENSG00000176834|ENST00000359236|VSIG10;ENSG00000100353|ENST00000216190|EIF3D;ENST00000475066.1_1_7:154759501-154775093:-|nuORF;nc|ENSG00000290292|Q8IX15|HOMEZ;nc|ENSG00000290292|Q8IX15-3|HOMEZ;ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|5|intron;nc|ENSG00000054267|Q4LE39-4|ARID4B;ENSG00000054267|ENST00000264183|ARID4B;ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000052749|Q5JTH9-3|RRP12;nc|ENSG00000052749|Q5JTH9-2|RRP12;ENSG00000186487|ENST00000647738|MYT1L;nc|ENSG00000186487|Q9UL68-4|MYT1L;nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000054267|Q4LE39-3|ARID4B;ENSG00000146216|ENST00000259750|TTBK1;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENSG00000108592|ENST00000427159|FTSJ3;ENSG00000134504|ENST00000580059|KCTD1;ENSG00000119041|ENST00000263956|GTF3C3;nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1;nc|ENSG00000155846|Q86YN6-5|PPARGC1B;nc|ENSG00000155846|Q86YN6-2|PPARGC1B;nc|ENSG00000155846|Q86YN6-6|PPARGC1B;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENSG00000155846|ENST00000309241|PPARGC1B;nc|ENSG00000070729|Q14028-4|CNGB1;ENSG00000141456|ENST00000572293|PELP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000114631|Q9NZ53-2|PODXL2;ENSG00000173660|ENST00000311672|UQCRH;ENST00000497589.1_1_2:220493286-220496728:+|nuORF;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;ENST00000585325.5_1_19:11557144-11558756:+|nuORF;ENST00000461789.1_1_20:23345881-23349399:+|nuORF;chr1:150229114-150235733|62|33.23|0.97|5.1|-|ENST00000629042|ANP32E,ANP32E;ENST00000580376.5_1_17:61901002-61901722:-|nuORF;ENST00000505904.1_1_3:42700310-42703020:+|nuORF;ENST00000477345.1_1_9:140086566-140087185:-|nuORF;ENST00000489842.1_1_9:135931263-135933364:+|nuORF;ENSG00000229674|ENST00000448797|H2AL3;ENST00000451509.5_1_22:37771856-37771958:-|nuORF;nc|ENSG00000143401|Q9BTT0-2|ANP32E;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;ENSG00000131116|ENST00000300811|ZNF428;nc|ENSG00000143401|Q9BTT0-3|ANP32E;ENST00000595368.5_1_19:39936232-39948556:+|nuORF;ENSG00000029993|ENST00000325307|HMGB3;ENST00000225328.9_2_17:3599414-3599678:-|nuORF;ENST00000592445.1_1_19:11558256-11558487:+|nuORF;ENST00000436786.1_1_9:22646290-22682618:+|nuORF;nc|ENSG00000174446|O75971-2|SNAPC5;ENST00000462193.2_1_7:99720491-99722508:+|nuORF;ENST00000568875.1_1_15:66786776-66787321:-|nuORF;ENST00000242505.10_1_10:74928045-74934468:+|nuORF;ENST00000486951.1_1_1:46769438-46774832:+|nuORF;ENST00000557589.1_1_12:56817199-56818568:-|nuORF;ENST00000237654.8_1_4:77987453-77996858:-|nuORF;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;ENST00000585540.1_1_19:11558256-11559107:+|nuORF;ENST00000533654.5_1_1:150192985-150202975:-|nuORF;ENSG00000233954|ENST00000696689|UQCRHL;ENSG00000178257|ENST00000327157|PRM3;ENSG00000174446|ENST00000316634|SNAPC5;ENSG00000197272|ENST00000356897|IL27;nc|ENSG00000105701|Q14318|FKBP8;nc|ENSG00000008130|O95544-3|NADK;ENSG00000198783|ENST00000361952|ZNF830;ENSG00000167525|ENST00000682792|PROCA1;ENSG00000185482|ENST00000332782|STAC3;nc|ENSG00000167525|Q8NCQ7|PROCA1;nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000105701|ENST00000608443|FKBP8;nc|ENSG00000156374|Q9BYE7-3|PCGF6;ENSG00000167778|ENST00000301463|SPRYD3;ENSG00000159387|ENST00000290552|IRX6;nc|ENSG00000105701|Q14318-3|FKBP8;ENSG00000100604|ENST00000216492|CHGA;ENSG00000186462|ENST00000373517|NAP1L2;ENSG00000008130|ENST00000341426|NADK;ENST00000476241.2_2_1:245025757-245027609:-|nuO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EEEEEEEEE	9	Unmodified	_EEEEEEEEE_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000204209|Q9UER7-3|DAXX;ENSG00000166483|ENST00000450114|WEE1;ENSG00000189186|ENST00000451261|DCAF8L2;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;ENSG00000184828|ENST00000590800|ZBTB7C;ENSG00000114631|ENST00000342480|PODXL2;nc|ENSG00000114853|Q9UFB7-2|ZBTB47;ENSG00000125817|ENST00000379751|CENPB;ENST00000479481.5_1_10:99116853-99131081:-|nuORF;nc|ENSG00000008130|O95544-2|NADK;ENSG00000100401|ENST00000356244|RANGAP1;ENSG00000178662|ENST00000651982|CSRNP3;nc|ENSG00000204209|Q9UER7-5|DAXX;nc|ENSG00000182606|Q9UPV9-2|TRAK1;nc|ENSG00000204209|Q9UER7-4|DAXX;nc|ENSG00000204209|Q9UER7-2|DAXX;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;ENSG00000204209|ENST00000374542|DAXX;ENSG00000114853|ENST00000232974|ZBTB47;nc|ENSG00000130175|P14314-2|PRKCSH;nc|ENSG00000130175|P14314|PRKCSH;nc|ENSG00000178662|Q8WYN3-2|CSRNP3;ENSG00000105229|ENST00000262971|PIAS4;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000186660|Q96JP5-2|ZFP91;ENSG00000186660|ENST00000316059|ZFP91;nc|ENSG00000100353|O15371-3|EIF3D;ENSG00000130175|ENST00000677123|PRKCSH;nc|ENSG00000176834|Q8N0Z9-2|VSIG10;ENSG00000176834|ENST00000359236|VSIG10;ENSG00000100353|ENST00000216190|EIF3D;ENST00000475066.1_1_7:154759501-154775093:-|nuORF;nc|ENSG00000290292|Q8IX15|HOMEZ;nc|ENSG00000290292|Q8IX15-3|HOMEZ;ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|5|intron;nc|ENSG00000054267|Q4LE39-4|ARID4B;ENSG00000054267|ENST00000264183|ARID4B;ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000052749|Q5JTH9-3|RRP12;nc|ENSG00000052749|Q5JTH9-2|RRP12;ENSG00000186487|ENST00000647738|MYT1L;nc|ENSG00000186487|Q9UL68-4|MYT1L;nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000054267|Q4LE39-3|ARID4B;ENSG00000146216|ENST00000259750|TTBK1;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENSG00000108592|ENST00000427159|FTSJ3;ENSG00000134504|ENST00000580059|KCTD1;ENSG00000119041|ENST00000263956|GTF3C3;nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1;nc|ENSG00000155846|Q86YN6-5|PPARGC1B;nc|ENSG00000155846|Q86YN6-2|PPARGC1B;nc|ENSG00000155846|Q86YN6-6|PPARGC1B;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENSG00000155846|ENST00000309241|PPARGC1B;nc|ENSG00000070729|Q14028-4|CNGB1;ENSG00000141456|ENST00000572293|PELP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000114631|Q9NZ53-2|PODXL2;ENSG00000173660|ENST00000311672|UQCRH;ENST00000497589.1_1_2:220493286-220496728:+|nuORF;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;ENST00000585325.5_1_19:11557144-11558756:+|nuORF;ENST00000461789.1_1_20:23345881-23349399:+|nuORF;chr1:150229114-150235733|62|33.23|0.97|5.1|-|ENST00000629042|ANP32E,ANP32E;ENST00000580376.5_1_17:61901002-61901722:-|nuORF;ENST00000505904.1_1_3:42700310-42703020:+|nuORF;ENST00000477345.1_1_9:140086566-140087185:-|nuORF;ENST00000489842.1_1_9:135931263-135933364:+|nuORF;ENSG00000229674|ENST00000448797|H2AL3;ENST00000451509.5_1_22:37771856-37771958:-|nuORF;nc|ENSG00000143401|Q9BTT0-2|ANP32E;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;ENSG00000131116|ENST00000300811|ZNF428;nc|ENSG00000143401|Q9BTT0-3|ANP32E;ENST00000595368.5_1_19:39936232-39948556:+|nuORF;ENSG00000029993|ENST00000325307|HMGB3;ENST00000225328.9_2_17:3599414-3599678:-|nuORF;ENST00000592445.1_1_19:11558256-11558487:+|nuORF;ENST00000436786.1_1_9:22646290-22682618:+|nuORF;nc|ENSG00000174446|O75971-2|SNAPC5;ENST00000462193.2_1_7:99720491-99722508:+|nuORF;ENST00000568875.1_1_15:66786776-66787321:-|nuORF;ENST00000242505.10_1_10:74928045-74934468:+|nuORF;ENST00000486951.1_1_1:46769438-46774832:+|nuORF;ENST00000557589.1_1_12:56817199-56818568:-|nuORF;ENST00000237654.8_1_4:77987453-77996858:-|nuORF;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;ENST00000585540.1_1_19:11558256-11559107:+|nuORF;ENST00000533654.5_1_1:150192985-150202975:-|nuORF;ENSG00000233954|ENST00000696689|UQCRHL;ENSG00000178257|ENST00000327157|PRM3;ENSG00000174446|ENST00000316634|SNAPC5;ENSG00000197272|ENST00000356897|IL27;nc|ENSG00000105701|Q14318|FKBP8;nc|ENSG00000008130|O95544-3|NADK;ENSG00000198783|ENST00000361952|ZNF830;ENSG00000167525|ENST00000682792|PROCA1;ENSG00000185482|ENST00000332782|STAC3;nc|ENSG00000167525|Q8NCQ7|PROCA1;nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000105701|ENST00000608443|FKBP8;nc|ENSG00000156374|Q9BYE7-3|PCGF6;ENSG00000167778|ENST00000301463|SPRYD3;ENSG00000159387|ENST00000290552|IRX6;nc|ENSG00000105701|Q14318-3|FKBP8;ENSG00000100604|ENST00000216492|CHGA;ENSG00000186462|ENST00000373517|NAP1L2;ENSG00000008130|ENST00000341426|NADK;ENST00000476241.2_2_1:245025757-245027609:-|nuO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EEEEEEEEE	9	Unmodified	_EEEEEEEEE_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000204209|Q9UER7-3|DAXX;ENSG00000166483|ENST00000450114|WEE1;ENSG00000189186|ENST00000451261|DCAF8L2;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;ENSG00000184828|ENST00000590800|ZBTB7C;ENSG00000114631|ENST00000342480|PODXL2;nc|ENSG00000114853|Q9UFB7-2|ZBTB47;ENSG00000125817|ENST00000379751|CENPB;ENST00000479481.5_1_10:99116853-99131081:-|nuORF;nc|ENSG00000008130|O95544-2|NADK;ENSG00000100401|ENST00000356244|RANGAP1;ENSG00000178662|ENST00000651982|CSRNP3;nc|ENSG00000204209|Q9UER7-5|DAXX;nc|ENSG00000182606|Q9UPV9-2|TRAK1;nc|ENSG00000204209|Q9UER7-4|DAXX;nc|ENSG00000204209|Q9UER7-2|DAXX;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;ENSG00000204209|ENST00000374542|DAXX;ENSG00000114853|ENST00000232974|ZBTB47;nc|ENSG00000130175|P14314-2|PRKCSH;nc|ENSG00000130175|P14314|PRKCSH;nc|ENSG00000178662|Q8WYN3-2|CSRNP3;ENSG00000105229|ENST00000262971|PIAS4;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000186660|Q96JP5-2|ZFP91;ENSG00000186660|ENST00000316059|ZFP91;nc|ENSG00000100353|O15371-3|EIF3D;ENSG00000130175|ENST00000677123|PRKCSH;nc|ENSG00000176834|Q8N0Z9-2|VSIG10;ENSG00000176834|ENST00000359236|VSIG10;ENSG00000100353|ENST00000216190|EIF3D;ENST00000475066.1_1_7:154759501-154775093:-|nuORF;nc|ENSG00000290292|Q8IX15|HOMEZ;nc|ENSG00000290292|Q8IX15-3|HOMEZ;ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|5|intron;nc|ENSG00000054267|Q4LE39-4|ARID4B;ENSG00000054267|ENST00000264183|ARID4B;ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000052749|Q5JTH9-3|RRP12;nc|ENSG00000052749|Q5JTH9-2|RRP12;ENSG00000186487|ENST00000647738|MYT1L;nc|ENSG00000186487|Q9UL68-4|MYT1L;nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000054267|Q4LE39-3|ARID4B;ENSG00000146216|ENST00000259750|TTBK1;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENSG00000108592|ENST00000427159|FTSJ3;ENSG00000134504|ENST00000580059|KCTD1;ENSG00000119041|ENST00000263956|GTF3C3;nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1;nc|ENSG00000155846|Q86YN6-5|PPARGC1B;nc|ENSG00000155846|Q86YN6-2|PPARGC1B;nc|ENSG00000155846|Q86YN6-6|PPARGC1B;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENSG00000155846|ENST00000309241|PPARGC1B;nc|ENSG00000070729|Q14028-4|CNGB1;ENSG00000141456|ENST00000572293|PELP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000114631|Q9NZ53-2|PODXL2;ENSG00000173660|ENST00000311672|UQCRH;ENST00000497589.1_1_2:220493286-220496728:+|nuORF;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;ENST00000585325.5_1_19:11557144-11558756:+|nuORF;ENST00000461789.1_1_20:23345881-23349399:+|nuORF;chr1:150229114-150235733|62|33.23|0.97|5.1|-|ENST00000629042|ANP32E,ANP32E;ENST00000580376.5_1_17:61901002-61901722:-|nuORF;ENST00000505904.1_1_3:42700310-42703020:+|nuORF;ENST00000477345.1_1_9:140086566-140087185:-|nuORF;ENST00000489842.1_1_9:135931263-135933364:+|nuORF;ENSG00000229674|ENST00000448797|H2AL3;ENST00000451509.5_1_22:37771856-37771958:-|nuORF;nc|ENSG00000143401|Q9BTT0-2|ANP32E;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;ENSG00000131116|ENST00000300811|ZNF428;nc|ENSG00000143401|Q9BTT0-3|ANP32E;ENST00000595368.5_1_19:39936232-39948556:+|nuORF;ENSG00000029993|ENST00000325307|HMGB3;ENST00000225328.9_2_17:3599414-3599678:-|nuORF;ENST00000592445.1_1_19:11558256-11558487:+|nuORF;ENST00000436786.1_1_9:22646290-22682618:+|nuORF;nc|ENSG00000174446|O75971-2|SNAPC5;ENST00000462193.2_1_7:99720491-99722508:+|nuORF;ENST00000568875.1_1_15:66786776-66787321:-|nuORF;ENST00000242505.10_1_10:74928045-74934468:+|nuORF;ENST00000486951.1_1_1:46769438-46774832:+|nuORF;ENST00000557589.1_1_12:56817199-56818568:-|nuORF;ENST00000237654.8_1_4:77987453-77996858:-|nuORF;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;ENST00000585540.1_1_19:11558256-11559107:+|nuORF;ENST00000533654.5_1_1:150192985-150202975:-|nuORF;ENSG00000233954|ENST00000696689|UQCRHL;ENSG00000178257|ENST00000327157|PRM3;ENSG00000174446|ENST00000316634|SNAPC5;ENSG00000197272|ENST00000356897|IL27;nc|ENSG00000105701|Q14318|FKBP8;nc|ENSG00000008130|O95544-3|NADK;ENSG00000198783|ENST00000361952|ZNF830;ENSG00000167525|ENST00000682792|PROCA1;ENSG00000185482|ENST00000332782|STAC3;nc|ENSG00000167525|Q8NCQ7|PROCA1;nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000105701|ENST00000608443|FKBP8;nc|ENSG00000156374|Q9BYE7-3|PCGF6;ENSG00000167778|ENST00000301463|SPRYD3;ENSG00000159387|ENST00000290552|IRX6;nc|ENSG00000105701|Q14318-3|FKBP8;ENSG00000100604|ENST00000216492|CHGA;ENSG00000186462|ENST00000373517|NAP1L2;ENSG00000008130|ENST00000341426|NADK;ENST00000476241.2_2_1:245025757-245027609:-|nuO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65|ENST00000261741|RBM19;REV__nc|ENSG00000005379|O95153-2|TSPOAP1;nc|ENSG00000005379|O95153-2|TSPOAP1;REV__ENSG00000134504|ENST00000580059|KCTD1;REV__ENSG00000119041|ENST00000263956|GTF3C3;ENST00000498157.1_1_1:109815480-109816293:+|nuORF;nc|ENSG00000116127|Q8TCU4-2|ALMS1;REV__ENSG00000180900|ENST00000356994|SCRIB;REV__ENSG00000237441|ENST00000497454|RGL2;ENSG00000143126|ENST00000271332|CELSR2;ENSG00000006432|ENST00000554752|MAP3K9;nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000009954|Q9UIG0-2|BAZ1B;ENSG00000011451|ENST00000673675|WIZ;nc|ENSG00000040633|Q9BUL5-3|PHF23;ENSG00000052749|ENST00000370992|RRP12;nc|ENSG00000066248|Q8N5V2-2|NGEF;nc|ENSG00000074356|Q53F19-2|NCBP3;ENST00000434116.6_1_15:65916409-65944223:+|nuORF;ENSG00000080224|ENST00000389672|EPHA6;ENST00000511906.5_1_5:37379391-37721408:+|nuORF;nc|ENSG00000083896|Q96MU7-2|YTHDC1;ENSG00000085185|ENST00000540052|BCORL1;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000102001|O60840-4|CACNA1F;nc|ENSG00000105227|Q9BXM0-3|PRX;ENSG00000110092|ENST00000227507|CCND1;ENSG00000110429|ENST00000265651|FBXO3;ENSG00000110811|ENST00000290510|P3H3;nc|ENSG00000111602|Q9UNS1-2|TIMELESS;nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000115053|ENST00000322723|NCL;nc|ENSG00000115310|Q9NQC3-2|RTN4;nc|ENSG00000119866|Q9H165-2|BCL11A;ENSG00000122965|ENST00000261741|RBM19;ENSG00000125812|ENST00000338121|GZF1;ENSG00000126461|ENST00000360565|SCAF1;nc|ENSG00000128596|Q96JN2-3|CCDC136;nc|ENSG00000129951|Q6T4P5-4|PLPPR3;nc|ENSG00000130294|Q12756-2|KIF1A;ENSG00000130528|ENST00000252825|HRC;ENSG00000132716|ENST00000368074|DCAF8;ENSG00000135632|ENST00000389501|SMYD5;ENSG00000136274|ENST00000490531|NACAD;nc|ENSG00000136478|Q8IWB9-2|TEX2;nc|ENSG00000139154|Q6ZN18|AEBP2;ENSG00000141506|ENST00000447110|PIK3R5;ENSG00000146857|ENST00000662584|STRA8;nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;ENSG00000149930|ENST00000308893|TAOK2;ENSG00000150990|ENST00000308736|DHX37;ENSG00000153187|ENST00000640218|HNRNPU;ENSG00000154227|ENST00000679737|CERS3;nc|ENSG00000156650|Q8WYB5-2|KAT6B;ENSG00000158352|ENST00000376020|SHROOM4;nc|ENSG00000163520|P98095|FBLN2;ENSG00000163798|ENST00000326019|SLC4A1AP;ENSG00000166997|ENST00000262932|CNPY4;ENSG00000171532|ENST00000302584|NEUROD2;nc|ENSG00000171680|O94827-4|PLEKHG5;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000176058|Q4KMQ1-2|TPRN;nc|ENSG00000180592|Q1XH10-2|SKIDA1;nc|ENSG00000180900|Q14160-2|SCRIB;ENSG00000181378|ENST00000341552|CFAP65;ENSG00000182255|ENST00000328224|KCNA4;ENSG00000188070|ENST00000433688|ZFTA;nc|ENSG00000196235|O00267-2|SUPT5H;nc|ENSG00000198160|Q8N108-19|MIER1;nc|ENSG00000204116|Q5VXU3-2|CHIC1;ENSG00000234127|ENST00000454678|TRIM26;ENSG00000237441|ENST00000497454|RGL2;ENSG00000243156|ENST00000441493|MICAL3;ENSG00000266714|ENST00000645453|MYO15B;ENSG00000274286|ENST00000620793|ADRA2B;ENSG00000277535|ENST00000620151|CT47C1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000118816|Q14094-2|CCNI;nc|ENSG00000155846|Q86YN6-4|PPARGC1B;nc|ENSG00000248333|P21127-6|CDK11B;REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__ENSG00000006118|ENST00000453848|TMEM132A;REV__ENSG00000006432|ENST00000554752|MAP3K9;REV__ENST00000598846.1_1_1:1636463-1654047:-|nuORF;REV__ENSG00000008130|ENST00000341426|NADK;REV__nc|ENSG00000008735|Q13387-3|MAPK8IP2;REV__nc|ENSG00000009954|Q9UIG0-2|BAZ1B;REV__nc|ENSG00000011451|O95785|WIZ;REV__nc|ENSG00000040633|Q9BUL5-3|PHF23;REV__ENSG00000054267|ENST00000264183|ARID4B;REV__ENSG00000070729|ENST00000251102|CNGB1;REV__ENSG00000074356|ENST00000389005|NCBP3;REV__ENSG00000080224|ENST00000389672|EPHA6;REV__ENSG00000082068|ENST00000265107|WDR70;REV__nc|ENSG00000085224|P46100-2|ATRX;REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN;REV__ENSG00000100401|ENST00000356244|RANGAP1;REV__ENSG00000100813|ENST00000605057|ACIN1;REV__nc|ENSG00000102001|O60840-4|CACNA1F;REV__nc|ENSG00000105227|Q9BXM0-3|PRX;REV__ENSG00000105229|ENST00000262971|PIAS4;REV__ENSG00000108592|ENST00000427159|FTSJ3;REV__ENSG00000110092|ENST00000227507|CCND1;REV__nc|ENSG00000111602|Q9UNS1-2|TIMELESS;REV__ENSG00000112659|ENST00000252050|CUL9;REV__nc|ENSG00000114853|Q9UFB7-2|ZBTB47;REV__ENSG00000114923|ENST00000358055|SLC4A3;REV__ENST00000461347.5_1_2:232323706-232327997:-|nuORF;REV__nc|ENSG00000115310|Q9NQC3-4|RTN4;REV__nc|ENSG00000119866|Q9H165-2|BCL11A;REV__ENSG00000125817|ENST00000379751|CENPB;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__nc|ENSG00000127152|Q9C0K0-2|BCL11B;REV__ENSG00000129951|ENST00000520876|PLPPR3;REV__nc|ENSG00000130175|P14314-2|PRKCSH;REV__ENSG00000130294|ENST00000498729|KIF1A;REV__ENSG00000136274|ENST00000490531|NACAD;REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A;REV__ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|3|intron;REV__ENSG00000143126|ENST00000271332|CELSR2;REV__ENSG00000146216|ENST00000259750|TTBK1;REV__nc|ENSG00000148516|P37275-3|ZEB1;REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2;REV__ENSG00000150990|ENST00000308736|DHX37;REV__ENSG00000154227|ENST00000679737|CERS3;REV__nc|ENSG00000155846|Q86YN6-6|PPARGC1B;REV__ENSG00000156650|ENST00000287239|KAT6B;REV__ENSG00000156860|ENST00000356166|FBRS;REV__ENST00000475066.1_1_7:154759501-154775093:-|nuORF;REV__ENSG00000158417|ENST00000289371|EIF5B;REV__ENSG00000163798|ENST00000326019|SLC4A1AP;REV__nc|ENSG00000167525|Q8NCQ7-2|PROCA1;REV__nc|ENSG00000171603|O94985-2|CLSTN1;REV__nc|ENSG00000173120|Q9Y2K7-2|KDM2A;REV__nc|ENSG00000174348|Q7Z5L7-4|PODN;REV__ENSG00000176058|ENST00000409012|TPRN;REV__nc|ENSG00000176834|Q8N0Z9-2|VSIG10;REV__ENSG00000181378|ENST00000341552|CFAP65;REV__ENSG00000183304|ENST00000381003|FAM9A;REV__nc|ENSG00000183495|Q96L91-4|EP400;REV__nc|ENSG00000186462|Q9ULW6-2|NAP1L2;REV__nc|ENSG00000186487|Q9UL68-4|MYT1L;REV__ENSG00000188070|ENST00000433688|ZFTA;REV__ENSG00000234127|ENST00000454678|TRIM26;REV__ENSG00000266714|ENST00000645453|MYO15B;REV__ENSG00000274286|ENST00000620793|ADRA2B;REV__ENST00000436786.1_1_9:22646290-22682618:+|nuORF;REV__nc|ENSG00000182606|Q9UPV9-2|TRAK1;REV__nc|ENSG00000204209|Q9UER7-5|DAXX;REV__nc|ENSG00000290292|Q8IX15|HOMEZ	nc|ENSG00000114923|P48751-3|SLC4A3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	590.704228	1179.3939	-1.3669	-0.00080743	1.8209	0.0010756	0.45399	0.00026817	590.7053163032613	25.796	0.57251	25.796	25.625	26.197	0	-0.076401	0.0020264	NaN	133.81	37	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35450			5800	15087;5055;14857;208;4602;30022;23797;3511;2943;15640;6926;18220;18180;1527;5475;20604;2809;8437;22423;2899;18701;8031;16101;16097;16186;20201;16084;22454;5219;2192;15285;5473;17222;2675;29691;16398;736;18520;8953;17316;23964;7440;7383;30159;5814;682;17876;17516;19771;4507;6695;14818;7335;7356;19515;5387;18864;19303;3630;20500;5086;20534;694;793;5660;7535;30079;750;5396;19313;18744;4392;19147;16689;8016;29832;698;16884;8759;1705;1310;22146;22104;3100;17725;8805;2833;22609;1980;21890;2529;17796;17517;18070;18082;18074;18108;17958;20972;18671;26695;23999;23776;22976;22858;22855;22593;21987;21754;18381;21392;20448;20373;20228;20122;19994;19563;18854;18838;18725;20510;17189;7054;16830;3651;3611;3550;3454;3417;3255;2587;2544;2511;1510;1477;1437;1306;1154;1004;928;759;12822;18337;7728;5057;23458;3486;3822;17039;4040;4113;16798;16609;16319;16154;16142;16129;16128;15009;14868;9023;8994;8743;8414;8247;7902;6829;6680;6259;5866;5262;4947;4865;4349;4102;30293	4029	4035							-0.18861864307405085
EEEGEDDEDA	10	Unmodified	_EEEGEDDEDA_					0	0	0		nc|ENSG00000198160|Q8N108-19|MIER1;nc|ENSG00000198160|Q8N108-16|MIER1;nc|ENSG00000198160|Q8N108-14|MIER1;nc|ENSG00000198160|Q8N108-18|MIER1;nc|ENSG00000198160|Q8N108-17|MIER1;nc|ENSG00000198160|Q8N108-15|MIER1;nc|ENSG00000198160|Q8N108|MIER1;nc|ENSG00000198160|Q8N108-13|MIER1;ENSG00000198160|ENST00000401041|MIER1	nc|ENSG00000198160|Q8N108-19|MIER1	nc|ENSG00000198160|Q8N108-19|MIER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.1890869140625	2	569.188745	1136.36294	0.5193	0.00029558	0.91832	0.0005227	1.4376	0.00081828	569.1892240067746	34.352	0.53815	34.306	34.026	34.564	-0.045815					33	20	2	0	0	0	0.85958	1	1726	1726		15.642	1.5047	1	155870			5801	8247	4030	4036	6501	6501					-0.199790176216311
EEEGGALL	8	Unmodified	_EEEGGALL_					0	0	0			REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	409.8008117675781	2	409.200533	816.386513	2.9083	0.0011901	-2.8138	-0.0011514	0.094471	3.8657E-05	409.19745064981237	19.402	0.11413	19.327	19.25	19.364	-0.074974					7	3	3	0	0	0	0.4196	1	421	421		20.482	10.297	1	8709.7	+		5802	22001	4031	4037	6502	6502					-0.029024625358488265
EEEKFPTQL	9	Unmodified	_EEEKFPTQL_					0	0	0		ENSG00000122692|ENST00000397149|SMU1;nc|ENSG00000122692|Q2TAY7-2|SMU1	ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.2830810546875	2	560.779679	1119.5448	0.31477	0.00017651	-1.3949	-0.00078222	-1.0801	-0.00060571	560.7791508296577	52.432	0.74635	52.856	52.638	53.384	0.42348					39	17	4	0	0	0	0.066118	1	5251	5251		101.25	5.4375	1	1492600			5803	3240	4032	4038	6503	6503					-0.010185883474150614
EEEKFPTQL	9	Unmodified	_EEEKFPTQL_					0	0	0		ENSG00000122692|ENST00000397149|SMU1;nc|ENSG00000122692|Q2TAY7-2|SMU1	ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.7804565429688	2	560.779679	1119.5448	0.33517	0.00018796	-0.41265	-0.0002314	-0.077477	-4.3447E-05	560.7792556364047	52.218	0.82365	52.885	52.637	53.461	0.66729					36	19	3	0	0	0	0.29259	2	5235	5235;5247		65.465	12.114	1	1272000			5804	3240	4032	4038	6504;6505	6504					-0.010185883474150614
EEEKKKKAN	9	Unmodified	_EEEKKKKAN_					0	0	0			REV__ENST00000406027.2_1_2:216946696-216946852:+|nuORF	REV__ENST00000406027.2_1_2:216946696-216946852:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3069458007812	2	552.306395	1102.59824	-0.70613	-0.00039	0.73262	0.00040463	0.026487	1.4629E-05	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.78983	1	9545	9545		27.882	1.1893	1	1609500	+		5805	26301	4033	4039	6506	6506					0.05104209155092576
EEEKKKKAN	9	Unmodified	_EEEKKKKAN_					0	0	0			REV__ENST00000406027.2_1_2:216946696-216946852:+|nuORF	REV__ENST00000406027.2_1_2:216946696-216946852:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3065795898438	2	552.306395	1102.59824	1.2817	0.0007079	-1.3256	-0.00073213	-0.043866	-2.4228E-05	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.76255	1	9619	9619		35.618	2.8059	1	1712700	+		5806	26301	4033	4039	6507	6507					0.05104209155092576
EEENIYLIVQ	10	Unmodified	_EEENIYLIVQ_					0	0	0			REV__ENSG00000166828|ENST00000300061|SCNN1G	REV__ENSG00000166828|ENST00000300061|SCNN1G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	625.3195190429688	2	625.319168	1248.62378	1.2904	0.0008069	0.086558	5.4126E-05	1.3769	0.00086102	625.3191697784131	64.348	0.83466	64.468	64.114	64.949	0.12005					63	28	3	0	0	0	0.67571	1	5679	5679		45.972	1.5951	1	439280	+		5807	21327	4034	4040	6508	6508					0.009416388868430658
EEEPEEGYRME	11	Unmodified	_EEEPEEGYRME_					0	0	0			REV__nc|ENSG00000121753|O60241-4|ADGRB2	REV__nc|ENSG00000121753|O60241-4|ADGRB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.5392150878906	3	466.522368	1396.54528	-1.3976	-0.000652	0.29516	0.0001377	-1.1024	-0.0005143	466.522083941739	30.57	0.399	30.599	30.406	30.805	0.028618					11	8	2	0	0	0	0.17334	1	2035	2035		41.08	16.804	1	42990	+		5808	18466	4035	4041	6509	6509					-0.13713581480578796
EEERERERRHF	11	Unmodified	_EEERERERRHF_					0	0	0			REV__ENST00000367203.8_1_1:204088192-204088234:+|nuORF	REV__ENST00000367203.8_1_1:204088192-204088234:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8270263671875	3	524.92571	1571.7553	1.241	0.00065144	2.7837	0.0014612	4.0247	0.0021127	525.2609079254693	98.992	0.16263	99.04	98.938	99.1	0.048157					5	3	2	0	0	0	0.181	1	10582	10582		18.531	5.5736	1	41971	+		5809	25558	4036	4042	6510	6510					-0.0077073797269804345
EEERTEWEGP	10	Unmodified	_EEERTEWEGP_					0	0	0			REV__ENST00000517535.5_1_8:22422841-22423627:+|nuORF	REV__ENST00000517535.5_1_8:22422841-22423627:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.1807861328125	3	421.182563	1260.52586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.885	1	45.806	45.306	46.306	-0.079002								0	0	0	0.45132	1	3331	3331		27.047	2.8155	1		+		5810	28045	4037	4043	6511	6511					-0.09398169709129434
EEESSAEDADE	11	Unmodified	_EEESSAEDADE_					0	0	0			REV__nc|ENSG00000185739|Q86TD4-1|SRL	REV__nc|ENSG00000185739|Q86TD4-1|SRL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.7149658203125	2	605.715127	1209.4157	0.06347	3.8444E-05	1.2302	0.00074515	1.2937	0.0007836	605.7158245439867	27.661	0.72188	27.702	27.304	28.026	0.040834					53	23	3	0	0	0	0.76322	1	1265	1265		19.104	1.6355	1	161250	+		5811	30100	4038	4044	6512	6512					-0.1806305955881271
EEEVAWDHH	9	Unmodified	_EEEVAWDHH_					0	0	0			REV__ENST00000273153.9_1_3:39188144-39194934:-|nuORF	REV__ENST00000273153.9_1_3:39188144-39194934:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	576.2412719726562	2	576.241252	1150.46795	-0.5751	-0.0003314	0.2482	0.00014302	-0.32691	-0.00018838	576.2412581993048	70.738	0.54914	70.701	70.457	71.006	-0.037857					45	27	2	0	0	0	0.72402	1	6867	6867		38.806	10.924	1	291680	+		5812	24555	4039	4045	6513	6513					-0.10126386843899127
EEEVLLAEL	9	Unmodified	_EEEVLLAEL_					0	0	0			REV__ENST00000434303.1_1_17:18811899-18812175:+|nuORF	REV__ENST00000434303.1_1_17:18811899-18812175:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7422485351562	2	522.776605	1043.53866	0.42034	0.00021974	1.9389	0.0010136	2.3592	0.0012333	523.2793570619497	48.899	0.56469	49.803	49.529	50.093	0.90424					30	13	3	0	0	0	0.20789	1	4736	4736		45.952	19.156	1	779400	+		5813	26662	4040	4046	6514	6514					0.01862893421048284
EEEVVLLA	8	Unmodified	_EEEVVLLA_					0	0	0		nc|ENSG00000171551|O95672-2|ECEL1;ENSG00000171551|ENST00000304546|ECEL1	nc|ENSG00000171551|O95672-2|ECEL1	nc|ENSG00000171551|O95672-2|ECEL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.24835205078125	2	451.247483	900.480414	-1.0589	-0.00047784	3.7993	0.0017144	2.7403	0.0012366	451.2490578408484	67.679	1.2813	67.739	67.313	68.595	0.059288					106	47	3	0	0	0	0.82464	1	6070	6070		21.702	1.2205	1	166740			5814	6681	4041	4047	6515	6515					0.02619256566435979
EEFGQAFSF	9	Unmodified	_EEFGQAFSF_					0	0	0		ENSG00000231389|ENST00000419277|HLA-DPA1;ENST00000479107.1_1_6:33037343-33041347:-|nuORF	ENSG00000231389|ENST00000419277|HLA-DPA1	ENSG00000231389|ENST00000419277|HLA-DPA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.2352905273438	2	531.232364	1060.45018	-0.033906	-1.8012E-05	0.64763	0.00034404	0.61372	0.00032603	531.2323451235446	85.133	0.78749	85.2	84.81	85.598	0.067261					37	17	3	0	0	0	0.0034731	1	8533	8533		138.83	42.635	1	269680			5815	8734	4042	4048	6516	6516					-0.0776310209876101
EEFGQAFSF	9	Unmodified	_EEFGQAFSF_					0	0	0		ENSG00000231389|ENST00000419277|HLA-DPA1;ENST00000479107.1_1_6:33037343-33041347:-|nuORF	ENSG00000231389|ENST00000419277|HLA-DPA1	ENSG00000231389|ENST00000419277|HLA-DPA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.2360229492188	2	531.232364	1060.45018	1.4176	0.00075309	-1.1909	-0.00063263	0.22677	0.00012047	531.2315526924625	85.249	0.78062	85.177	84.803	85.584	-0.07196					37	17	3	0	0	0	0.029359	1	8744	8744		118.74	39.292	1	328930			5816	8734	4042	4048	6517	6517					-0.0776310209876101
EEFGRFASF	9	Unmodified	_EEFGRFASF_					0	0	0		ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.2535400390625	2	545.253631	1088.49271	0.081856	4.4632E-05	-0.048483	-2.6435E-05	0.033373	1.8197E-05	545.2535786926758	68.87	1.1414	68.833	68.194	69.335	-0.036957					95	44	3	0	0	0	0.0034731	2	6656	6645;6656		138.83	51.071	1	834940			5817	8429	4043	4049	6518;6519	6519					-0.047997069705161266
EEFGRFASF	9	Unmodified	_EEFGRFASF_					0	0	0		ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.75634765625	2	545.253631	1088.49271	-0.18145	-9.8935E-05	-0.39303	-0.0002143	-0.57448	-0.00031324	545.2536071238325	66.647	1.2683	66.676	66.45	67.718	0.028587					88	55	3	0	0	0	0.12652	1	6319	6319		87.754	21.325	1	231750			5818	8429	4043	4049	6520	6520					-0.047997069705161266
EEFGRFASF	9	Unmodified	_EEFGRFASF_					0	0	0		ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.2535400390625	2	545.253631	1088.49271	-0.052327	-2.8531E-05	0.04838	2.6379E-05	-0.003947	-2.1521E-06	545.2535846022798	68.712	0.79516	68.745	68.418	69.213	0.033005					86	32	3	0	0	0	2.4207E-08	4	6571	6555;6563;6571;6581		158.07	67.298	1	808230			5819	8429	4043	4049	6521;6522;6523;6524	6523					-0.047997069705161266
EEFGRFASF	9	Unmodified	_EEFGRFASF_					0	0	0		ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	545.253631	1088.49271	-0.33476	-0.00018253	0.15618	8.5155E-05	-0.17858	-9.7372E-05	545.2536631909838	66.775	0.53688	66.792	66.601	67.138	0.016197	0.091713	0.00031429	NaN	87.754	40	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	190110			5820	8429	4043	4049							-0.047997069705161266
EEFGRFASF	9	Unmodified	_EEFGRFASF_					0	0	0		ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	545.253631	1088.49271	-0.34046	-0.00018564	0.68393	0.00037292	0.34348	0.00018728	545.2538835503511	68.888	0.70255	68.914	68.581	69.283	0.02636	0.083463	0.00046027	NaN	158.07	81	29	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	910640			5821	8429	4043	4049							-0.047997069705161266
EEFGRFASF	9	Unmodified	_EEFGRFASF_					0	0	0		ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	545.253631	1088.49271	0.30601	0.00016685	-0.64318	-0.0003507	-0.33718	-0.00018385	545.25330400119	66.668	0.49597	66.632	66.453	66.949	-0.035217	-0.067575	-0.00055741	NaN	87.754	40	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178470			5822	8429	4043	4049							-0.047997069705161266
EEFHIYTQY	9	Unmodified	_EEFHIYTQY_					0	0	0		ENSG00000120278|ENST00000696526|PLEKHG1	ENSG00000120278|ENST00000696526|PLEKHG1	ENSG00000120278|ENST00000696526|PLEKHG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.2796020507812	2	615.277303	1228.54005	-0.36246	-0.00022301	0.26487	0.00016297	-0.097594	-6.0047E-05	615.2774727169107	62.14	0.35509	62.131	61.969	62.324	-0.0094147					22	11	3	0	0	0	0.51307	1	5774	5774		51.335	8.4712	1	167880			5823	3122	4044	4050	6525	6525					-0.06507472490170585
EEFHIYTQY	9	Unmodified	_EEFHIYTQY_					0	0	0		ENSG00000120278|ENST00000696526|PLEKHG1	ENSG00000120278|ENST00000696526|PLEKHG1	ENSG00000120278|ENST00000696526|PLEKHG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	615.277303	1228.54005	0.27925	0.00017181	-1.0691	-0.00065779	-0.78986	-0.00048598	615.2765437956093	62.126	0.36463	62.093	61.86	62.225	-0.033169	0.0001372	-0.001153	NaN	51.335	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149780			5824	3122	4044	4050							-0.06507472490170585
EEFHIYTQY	9	Unmodified	_EEFHIYTQY_					0	0	0		ENSG00000120278|ENST00000696526|PLEKHG1	ENSG00000120278|ENST00000696526|PLEKHG1	ENSG00000120278|ENST00000696526|PLEKHG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	615.277303	1228.54005	-1.3326	-0.0008199	0.7742	0.00047635	-0.55837	-0.00034355	615.2777618212697	62.025	0.4114	62.054	61.833	62.245	0.029575	-0.038319	0.0011153	NaN	51.335	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	151190			5825	3122	4044	4050							-0.06507472490170585
EEFKQEEPK	9	Unmodified	_EEFKQEEPK_					0	0	0		nc|ENSG00000130182|Q96SZ4|ZSCAN10;ENSG00000130182|ENST00000576985|ZSCAN10;nc|ENSG00000130182|Q96SZ4-3|ZSCAN10	nc|ENSG00000130182|Q96SZ4|ZSCAN10	nc|ENSG00000130182|Q96SZ4|ZSCAN10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3529663085938	2	582.282586	1162.55062	-2.1608	-0.0012582	2.2954	0.0013366	0.13464	7.8396E-05	582.283730076334	39.456	0.76717	39.824	39.384	40.151	0.36797					47	17	3	0	0	0	0.18457	1	3299	3299		110.12	24.959	1	874600			5826	3623	4045	4051	6526	6526					-0.02415489835743756
EEFRPWSHTW	10	Unmodified	_EEFRPWSHTW_					0	0	0		chr14:35294529-35307994|48|45.6|0.0|22.12|+|2|TE_info:MIR,MIR_dup134546,MIR,SINE,donor,+,35294443,35294529|None,PSMA6|1	chr14:35294529-35307994|48|45.6|0.0|22.12|+|2|TE_info:MIR,MIR_dup134546,MIR,SINE,donor,+,35294443,35294529|None,PSMA6|1	chr14:35294529-35307994|48|45.6|0.0|22.12|+|2|TE_info:MIR,MIR_dup134546,MIR,SINE,donor,+,35294443,35294529|None,PSMA6|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.8797607421875	3	458.879038	1373.61528	-0.025887	-1.1879E-05	1.7304	0.00079403	1.7045	0.00078215	458.87985400201757	17.224	0.58286	16.742	16.532	17.115	-0.48256					33	12	5	0	0	0	0.86621	1	239	239		26.063	2.6855	1	687840			5827	168	4046	4052	6527	6527					-0.05657870239110707
EEFSISSNIIQ	11	Unmodified	_EEFSISSNIIQ_					0	0	0		ENSG00000180332|ENST00000379108|KCTD4	ENSG00000180332|ENST00000379108|KCTD4	ENSG00000180332|ENST00000379108|KCTD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.8157958984375	2	633.81425	1265.61395	-0.21836	-0.0001384	1.2394	0.00078556	1.021	0.00064715	633.8149832023514	75.797	0.86972	75.751	75.381	76.251	-0.045975					72	22	4	0	0	0	0.30449	1	7478	7478		75.043	3.1658	1	416850			5828	7324	4047	4053	6528	6528					-0.00823549118513256
EEFTIQVKKKP	11	Unmodified	_EEFTIQVKKKP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.57550048828125	3	449.594127	1345.76055	0.1666	7.4901E-05	-2.7482	-0.0012356	-2.5816	-0.0011607	449.92711045104386	30.776	0.39257	30.779	30.491	30.884	0.0037212					11	8	2	0	0	0	0.17273	1	2032	2032		23.378	6.8481	1	44120			5829	645	4048	4054	6529	6529					0.10150172837211358
EEFTIQVKKKP	11	Unmodified	_EEFTIQVKKKP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	449.594127	1345.76055	0.16541	7.4366E-05	-2.4607	-0.0011063	-2.2953	-0.0010319	449.9280041117176	30.969	0.17812	30.987	30.902	31.081	0.018362	0.13351	-0.00039455	NaN	23.378	7	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13185			5830	645	4048	4054							0.10150172837211358
EEFTIQVKKKP	11	Unmodified	_EEFTIQVKKKP_					0	0	0		ENSG00000000457|ENST00000367771|SCYL3;nc|ENSG00000000457|Q8IZE3|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	ENSG00000000457|ENST00000367771|SCYL3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	449.594127	1345.76055	-1.7675	-0.00079468	-0.48868	-0.00021971	-2.2562	-0.0010144	449.5938677992725	30.736	0.39938	30.795	30.481	30.88	0.059208	-0.058827	0.0022652	NaN	23.378	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32264			5831	645	4048	4054							0.10150172837211358
EEGAILKV	8	Unmodified	_EEGAILKV_					0	0	0		nc|ENSG00000188282|Q6ZNE9-3|RUFY4;ENSG00000188282|ENST00000697321|RUFY4	nc|ENSG00000188282|Q6ZNE9-3|RUFY4	nc|ENSG00000188282|Q6ZNE9-3|RUFY4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.7503662109375	2	429.750193	857.485833	0.14732	6.3313E-05	0.46597	0.00020025	0.6133	0.00026357	429.7502450669041	35.27	2.574	35.376	35.139	37.713	0.10604					195	79	3	0	0	0	0.60155	1	1912	1912		71.378	2.8932	1	1419900			5832	7918	4049	4055	6530	6530					0.05138980148910832
EEGEDSGTSA	10	Unmodified	_EEGEDSGTSA_					0	0	0		nc|ENSG00000171680|O94827-4|PLEKHG5;ENSG00000171680|ENST00000377728|PLEKHG5;nc|ENSG00000171680|O94827-3|PLEKHG5;nc|ENSG00000171680|O94827-7|PLEKHG5	nc|ENSG00000171680|O94827-4|PLEKHG5	nc|ENSG00000171680|O94827-4|PLEKHG5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.18548583984375	2	491.185808	980.357064	-0.081958	-4.0257E-05	-0.49754	-0.00024438	-0.57949	-0.00028464	491.1854436193473	64.538	1.8054	64.538	63.212	65.018	-0.00078583					113	67	2	0	0	0	0.86763	1	6017	6017		26.693	1.1189	1	132810			5833	6695	4050	4056	6531	6531					-0.13390071342644205
EEGFRQISLN	10	Unmodified	_EEGFRQISLN_					0	0	0		ENSG00000197355|ENST00000409858|UAP1L1	ENSG00000197355|ENST00000409858|UAP1L1	ENSG00000197355|ENST00000409858|UAP1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.8003540039062	2	596.801477	1191.5884	0.95699	0.00057113	-2.4999	-0.0014919	-1.5429	-0.0009208	596.799365667397	27.931	1.062	27.676	27.325	28.387	-0.25465					49	25	4	0	0	0	0.73395	1	1678	1678		42.864	7.246	1	630480			5834	8156	4051	4057	6532	6532					0.00027021149730899197
EEGGTDAVVDL	11	Unmodified	_EEGGTDAVVDL_					0	0	0			REV__nc|ENSG00000135636|O75923-3|DYSF	REV__nc|ENSG00000135636|O75923-3|DYSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.7584228515625	2	552.756401	1103.49825	0.42294	0.00023378	4.1463	0.0022919	4.5692	0.0025257	552.7585218072531	49.286	1.1436	49.286	48.486	49.63	0.00016785					48	25	3	0	0	0	0.65746	1	4151	4151		37.812	6.2817	1	244780	+		5835	29867	4052	4058	6533	6533					-0.049360729693717076
EEGKIKVHL	9	Unmodified	_EEGKIKVHL_					0	0	0			REV__ENSG00000130347|ENST00000369063|RTN4IP1	REV__ENSG00000130347|ENST00000369063|RTN4IP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.2305908203125	2	526.808574	1051.60259	-1.0741	-0.00056582	-0.070957	-3.7381E-05	-1.145	-0.0006032	526.8085905165456	90.443	1.0434	90.913	90.562	91.606	0.47068					43	25	2	0	0	0	0.20789	1	10704	10704		21.96	0	1	372980	+		5836	18869	4053	4059	6534	6534					0.07885718368675043
EEGKIKVHL	9	Unmodified	_EEGKIKVHL_					0	0	0			REV__ENSG00000130347|ENST00000369063|RTN4IP1	REV__ENSG00000130347|ENST00000369063|RTN4IP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	526.808574	1051.60259	-1.5277	-0.00080479	-4.1146	-0.0021676	-5.6423	-0.0029724	527.3061301901324	90.657	0.60712	90.837	90.431	91.038	0.18029	-0.048804	-0.0026317	NaN	21.96	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60797	+		5837	18869	4053	4059							0.07885718368675043
EEGPDVLRW	9	Unmodified	_EEGPDVLRW_					0	0	0		ENSG00000100934|ENST00000307712|SEC23A;nc|ENSG00000100934|Q15436-2|SEC23A;ENSG00000101310|ENST00000650089|SEC23B	ENSG00000100934|ENST00000307712|SEC23A;ENSG00000101310|ENST00000650089|SEC23B	ENSG00000100934|ENST00000307712|SEC23A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.77197265625	2	550.772188	1099.52982	-0.62011	-0.00034154	0.22988	0.00012661	-0.39023	-0.00021493	550.7721779787771	66.366	0.79084	66.377	66.169	66.96	0.010452					93	39	3	0	0	0	0.012649	5	6227	6217;6221;6227;6231;6240		131.03	20.694	1	1489500			5838	1886;1928	4054	4060	6535;6536;6537;6538;6539	6537					-0.015960354247681607
EEGPDVLRW	9	Unmodified	_EEGPDVLRW_					0	0	0		ENSG00000100934|ENST00000307712|SEC23A;nc|ENSG00000100934|Q15436-2|SEC23A;ENSG00000101310|ENST00000650089|SEC23B	ENSG00000100934|ENST00000307712|SEC23A;ENSG00000101310|ENST00000650089|SEC23B	ENSG00000100934|ENST00000307712|SEC23A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.2735595703125	2	550.772188	1099.52982	0.20093	0.00011067	-0.64019	-0.0003526	-0.43926	-0.00024193	550.7716334502886	66.287	1.0768	66.252	66.005	67.082	-0.035217					118	49	3	0	0	0	0.044173	7	6322	6322;6324;6329;6333;6338;6354;6366		110.12	41.635	1	1422100			5839	1886;1928	4054	4060	6540;6541;6542;6543;6544;6545;6546	6540					-0.015960354247681607
EEGPDVLRW	9	Unmodified	_EEGPDVLRW_					0	0	0		ENSG00000100934|ENST00000307712|SEC23A;nc|ENSG00000100934|Q15436-2|SEC23A;ENSG00000101310|ENST00000650089|SEC23B	ENSG00000100934|ENST00000307712|SEC23A;ENSG00000101310|ENST00000650089|SEC23B	ENSG00000100934|ENST00000307712|SEC23A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.771728515625	2	550.772188	1099.52982	-0.19023	-0.00010477	-0.2315	-0.0001275	-0.42172	-0.00023227	550.7718672682902	66.199	1.1831	66.226	65.995	67.179	0.027321					126	60	4	0	0	0	0.024351	8	6259	6255;6259;6264;6270;6275;6281;6287;6295		122.18	39.935	1	1485600			5840	1886;1928	4054	4060	6547;6548;6549;6550;6551;6552;6553;6554	6548					-0.015960354247681607
EEGPRDATTI	10	Unmodified	_EEGPRDATTI_					0	0	0		ENST00000600059.5_1_19:48988799-49002658:-|nuORF	ENST00000600059.5_1_19:48988799-49002658:-|nuORF	ENST00000600059.5_1_19:48988799-49002658:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.7637329101562	2	544.76456	1087.51457	-1.0809	-0.00058882	1.1647	0.00063448	0.083823	4.5664E-05	544.7650482422581	31.707	0.59852	31.786	31.514	32.113	0.079834					38	13	4	0	0	0	0.44803	1	2187	2187		60.118	8.7828	1	935830			5841	14377	4055	4061	6555	6555					-0.025689470126280867
EEGPRDATTI	10	Unmodified	_EEGPRDATTI_					0	0	0		ENST00000600059.5_1_19:48988799-49002658:-|nuORF	ENST00000600059.5_1_19:48988799-49002658:-|nuORF	ENST00000600059.5_1_19:48988799-49002658:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.7637329101562	2	544.76456	1087.51457	0.22201	0.00012094	-0.42308	-0.00023048	-0.20107	-0.00010953	544.7642467295972	31.673	0.64062	31.781	31.505	32.146	0.10707					39	14	4	0	0	0	0.42393	1	2186	2186		62.107	0	1	1107600			5842	14377	4055	4061	6556	6556					-0.025689470126280867
EEHILCRLK	9	Carbamidomethyl (C)	_EEHILC(Carbamidomethyl (C))RLK_	EEHILC(1)RLK		EEHILC(57)RLK		0	1	0			REV__ENSG00000174145|ENST00000309447|NWD2	REV__ENSG00000174145|ENST00000309447|NWD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3214111328125	2	599.324065	1196.63358	-0.28402	-0.00017022	-2.4118	-0.0014455	-2.6959	-0.0016157	599.3225591743176	59.55	0.7013	59.55	59.295	59.997	0.00051117					51	21	3	0	0	0	0.41566	1	5120	5120		56.721	7.185	1	234150	+		5843	21975	4056	4062	6557	6557	267				0.04312548411235184
EEHLKQLY	8	Unmodified	_EEHLKQLY_					0	0	0		ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF	ENSG00000119912|ENST00000265986|IDE	ENSG00000119912|ENST00000265986|IDE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2802124023438	2	530.277106	1058.53966	0.60487	0.00032075	3.4845	0.0018478	4.0894	0.0021685	530.2794405918029	59.156	1.3576	59.126	58.133	59.49	-0.030888					75	39	3	0	0	0	0.90465	1	5508	5508		40.573	3.4135	1	335700			5844	3102	4057	4063	6558	6558					0.012731525806202626
EEIAFLKKL	9	Unmodified	_EEIAFLKKL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.828369140625	2	545.828975	1089.6434	-0.35864	-0.00019575	-0.18098	-9.8785E-05	-0.53962	-0.00029454	545.8287539646547	60.31	1.0281	60.296	59.859	60.888	-0.013729					68	27	4	0	0	0	0.014285	5	5563	5551;5563;5575;5585;5596		129.68	45.608	1	1311700			5845	869	4058	4064	6559;6560;6561;6562;6563	6560					0.10216059688286805
EEIAFLKKL	9	Unmodified	_EEIAFLKKL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.82861328125	2	545.828975	1089.6434	0.94398	0.00051525	-1.5968	-0.0008716	-0.65285	-0.00035635	545.827934533518	60.19	1.0873	60.159	59.723	60.811	-0.031727					80	29	4	0	0	0	3.1417E-05	7	5675	5636;5644;5656;5666;5675;5685;5696		152.47	45.845	1	1559100			5846	869	4058	4064	6564;6565;6566;6567;6568;6569;6570	6568					0.10216059688286805
EEIAFLKKL	9	Unmodified	_EEIAFLKKL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.828857421875	2	545.828975	1089.6434	-0.57663	-0.00031474	-0.033697	-1.8393E-05	-0.61033	-0.00033313	545.8288028912038	60.116	1.1634	60.148	59.766	60.929	0.032822					87	32	4	0	0	0	3.1417E-05	7	5589	5551;5560;5570;5579;5589;5598;5608		152.47	35.567	1	1445500			5847	869	4058	4064	6571;6572;6573;6574;6575;6576;6577	6575					0.10216059688286805
EEIDGYRRFL	10	Unmodified	_EEIDGYRRFL_					0	0	0			REV__nc|ENSG00000111880|O60942-4|RNGTT	REV__nc|ENSG00000111880|O60942-4|RNGTT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.222900390625	3	433.222693	1296.64625	-0.043552	-1.8868E-05	0.069855	3.0263E-05	0.026303	1.1395E-05	433.222614821168	61.94	0.78705	61.907	61.546	62.333	-0.033169					48	19	3	0	0	0	0.86587	1	5861	5861		29.17	0.59333	1	852780	+		5848	17904	4059	4065	6578	6578					0.009792830751393922
EEIDLRSVGW	10	Unmodified	_EEIDLRSVGW_					0	0	0		ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	602.3041381835938	2	602.303852	1202.59315	-0.51181	-0.00030827	0.61892	0.00037278	0.1071	6.4509E-05	602.3040637313559	75.099	0.87683	75.145	74.796	75.673	0.045952					76	26	4	0	0	0	3.1513E-24	8	7204	7181;7187;7194;7204;7212;7221;7229;7241		180.87	74.406	1	1225700			5849	2504	4060	4066	6579;6580;6581;6582;6583;6584;6585;6586	6582					-4.0947075376607245E-05
EEIDLRSVGW	10	Unmodified	_EEIDLRSVGW_					0	0	0		ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.3038940429688	2	602.303852	1202.59315	0.11958	7.2026E-05	-0.11848	-7.1363E-05	0.0011006	6.6287E-07	602.3036475876663	75.05	1.0451	75.006	74.659	75.704	-0.043877					82	29	4	0	0	0	6.5442E-24	7	7389	7372;7381;7389;7398;7408;7420;7443		176.44	90.583	1	1186100			5850	2504	4060	4066	6587;6588;6589;6590;6591;6592;6593	6589					-4.0947075376607245E-05
EEIDLRSVGW	10	Unmodified	_EEIDLRSVGW_					0	0	0		ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	602.3040161132812	2	602.303852	1202.59315	-1.1515	-0.00069353	1.2544	0.00075552	0.10292	6.199E-05	602.3045152261253	74.856	0.92805	74.901	74.592	75.52	0.04509					73	27	4	0	0	0	5.2676E-11	6	7251	7243;7251;7260;7269;7280;7299		158.07	67.298	1	1231800			5851	2504	4060	4066	6594;6595;6596;6597;6598;6599	6595					-4.0947075376607245E-05
EEIEGFRY	8	Unmodified	_EEIEGFRY_					0	0	0		ENST00000415758.1_1_7:44608571-44609680:-|nuORF;ENST00000421223.5_1_7:44605603-44609680:-|nuORF;ENST00000446987.5_1_7:44605603-44612175:-|nuORF;nc|ENSG00000136271|Q9NY93-2|DDX56;ENSG00000136271|ENST00000258772|DDX56	ENST00000415758.1_1_7:44608571-44609680:-|nuORF	ENST00000415758.1_1_7:44608571-44609680:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	521.7466430664062	2	521.745639	1041.47673	0.25394	0.00013249	-0.29636	-0.00015462	-0.042421	-2.2133E-05	521.7454439619211	57.549	0.56262	57.52	57.288	57.851	-0.029865					30	17	2	0	0	0	0.60357	1	5311	5311		71.296	0	1	235630			5852	4100	4061	4067	6600	6600					-0.04235413207425154
EEIGSRNFF	9	Unmodified	_EEIGSRNFF_					0	0	0		nc|ENSG00000089159|P49023-4|PXN;ENST00000323871.9_2_12:120650119-120654597:-|nuORF;nc|ENSG00000089159|P49023-2|PXN;nc|ENSG00000089159|P49023|PXN;nc|ENSG00000089159|P49023-3|PXN;ENSG00000089159|ENST00000637617|PXN	nc|ENSG00000089159|P49023-4|PXN	nc|ENSG00000089159|P49023-4|PXN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.7633666992188	2	549.764363	1097.51417	-0.55456	-0.00030487	0.54834	0.00030146	-0.0062171	-3.4179E-06	549.764595561934	58.002	0.6686	57.988	57.65	58.318	-0.013641					44	22	3	0	0	0	0.096131	4	5248	5248;5252;5262;5271		93.195	29.889	1	219500			5853	1613	4062	4068	6601;6602;6603;6604	6601					-0.030683219418278895
EEIGSRNFF	9	Unmodified	_EEIGSRNFF_					0	0	0		nc|ENSG00000089159|P49023-4|PXN;ENST00000323871.9_2_12:120650119-120654597:-|nuORF;nc|ENSG00000089159|P49023-2|PXN;nc|ENSG00000089159|P49023|PXN;nc|ENSG00000089159|P49023-3|PXN;ENSG00000089159|ENST00000637617|PXN	nc|ENSG00000089159|P49023-4|PXN	nc|ENSG00000089159|P49023-4|PXN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.7642822265625	2	549.764363	1097.51417	0.55491	0.00030507	-0.4311	-0.000237	0.12381	6.8069E-05	549.7639018250305	58.021	0.77428	57.991	57.557	58.331	-0.029865					45	19	4	0	0	0	0.084975	3	5381	5358;5370;5381		96.19	34.718	1	208150			5854	1613	4062	4068	6605;6606;6607	6607					-0.030683219418278895
EEIGSRNFF	9	Unmodified	_EEIGSRNFF_					0	0	0		nc|ENSG00000089159|P49023-4|PXN;ENST00000323871.9_2_12:120650119-120654597:-|nuORF;nc|ENSG00000089159|P49023-2|PXN;nc|ENSG00000089159|P49023|PXN;nc|ENSG00000089159|P49023-3|PXN;ENSG00000089159|ENST00000637617|PXN	nc|ENSG00000089159|P49023-4|PXN	nc|ENSG00000089159|P49023-4|PXN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.7644653320312	2	549.764363	1097.51417	-0.27901	-0.00015339	0.1354	7.4437E-05	-0.14362	-7.8954E-05	549.7642870301257	57.844	0.60785	57.878	57.632	58.24	0.033905					34	16	3	0	0	0	0.21969	4	5283	5274;5283;5296;5308		71.877	20.685	1	212620			5855	1613	4062	4068	6608;6609;6610;6611	6609					-0.030683219418278895
EEIHATGFNY	10	Unmodified	_EEIHATGFNY_					0	0	0		nc|ENSG00000274487|A6NEC2-3|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1;ENSG00000141279|ENST00000322157|NPEPPS;nc|ENSG00000141279|P55786-2|NPEPPS	nc|ENSG00000274487|A6NEC2-3|NPEPPSL1	nc|ENSG00000274487|A6NEC2-3|NPEPPSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.7684326171875	2	590.767103	1179.51965	-0.57997	-0.00034262	0.59848	0.00035356	0.018514	1.0937E-05	590.7672318028879	53.638	0.53571	53.633	53.358	53.893	-0.0053711					19	12	2	0	0	0	0.20477	1	4696	4696		84.916	10.66	1	190230			5856	4485	4063	4069	6612	6612					-0.06292643150004551
EEIHATGFNY	10	Unmodified	_EEIHATGFNY_					0	0	0		nc|ENSG00000274487|A6NEC2-3|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1;ENSG00000141279|ENST00000322157|NPEPPS;nc|ENSG00000141279|P55786-2|NPEPPS	nc|ENSG00000274487|A6NEC2-3|NPEPPSL1	nc|ENSG00000274487|A6NEC2-3|NPEPPSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.766845703125	2	590.767103	1179.51965	-1.7809	-0.0010521	1.7789	0.0010509	-0.0019812	-1.1704E-06	590.7680215416999	53.66	0.60393	53.683	53.384	53.988	0.022541					31	15	3	0	0	0	0.30722	1	4738	4738		71.877	17.101	1	164490			5857	4485	4063	4069	6613	6613					-0.06292643150004551
EEILALTSL	9	Unmodified	_EEILALTSL_					0	0	0			REV__ENSG00000164080|ENST00000684192|RAD54L2	REV__ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7801513671875	2	494.78169	987.548827	-0.98597	-0.00048784	-1.4713	-0.00072798	-2.4573	-0.0012158	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.77546	1	8224	8224		31.955	2.8053	1	385180	+		5858	21027	4064	4070	6614	6614					0.0545550114627531
EEINEISYPK	10	Unmodified	_EEINEISYPK_					0	0	0		nc|ENSG00000163629|Q12923-2|PTPN13;nc|ENSG00000163629|Q12923-3|PTPN13;ENSG00000163629|ENST00000411767|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13	nc|ENSG00000163629|Q12923-2|PTPN13	nc|ENSG00000163629|Q12923-2|PTPN13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.2669372558594	3	407.871438	1220.59248	0.58559	0.00023885	-3.4877	-0.0014225	-2.9021	-0.0011837	407.8702001272497	27.265	0.52761	27.09	26.926	27.453	-0.17559					17	11	2	0	0	0	0.37624	1	1560	1560		38.754	16.174	1	65090			5859	5841	4065	4071	6615	6615					-0.008989341472670276
EEIRDTYPE	9	Unmodified	_EEIRDTYPE_					0	0	0		nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3	nc|ENSG00000170525|Q16875-3|PFKFB3	nc|ENSG00000170525|Q16875-3|PFKFB3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2955932617188	2	576.264393	1150.51423	-0.69286	-0.00039927	-3.6342	-0.0020942	-4.327	-0.0024935	576.2620911565242	75.536	0.45703	75.931	75.7	76.157	0.39507					11	10	2	0	0	0	0.20789	1	8563	8563		44.117	1.7207	1	96479			5860	6598	4066	4072	6616	6616					-0.05500366732485418
EEISKYDKICE	11	Unmodified	_EEISKYDKICE_					0	0	0		nc|ENSG00000105953|Q02218-2|OGDH;ENSG00000105953|ENST00000222673|OGDH	nc|ENSG00000105953|Q02218-2|OGDH	nc|ENSG00000105953|Q02218-2|OGDH	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.88116455078125	3	452.883237	1355.62788	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.511	1	18.511	18.011	19.011	0								0	0	0	0.56276	1	310	310		26.75	2.5179	1				5861	2267	4067	4073	6617	6617					-0.035706396817431596
EEIVELHPN	9	Unmodified	_EEIVELHPN_					0	0	0			REV__ENST00000497138.5_1_20:56806828-56807909:-|nuORF	REV__ENST00000497138.5_1_20:56806828-56807909:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.7691650390625	2	540.272021	1078.52949	-0.31884	-0.00017226	-2.5068	-0.0013544	-2.8257	-0.0015266	540.2705945360939	77.84	0.82594	78.245	77.72	78.546	0.4053					35	19	3	0	0	0	0.20789	1	8891	8891		37.159	0	1	751460	+		5862	27764	4068	4074	6618	6618					-0.0066345514460408594
EEIVKFTQI	9	Unmodified	_EEIVKFTQI_					0	0	0			REV__ENSG00000054219|ENST00000263636|LY75	REV__ENSG00000054219|ENST00000263636|LY75	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8077392578125	2	553.808239	1105.60193	-0.015909	-8.8104E-06	-0.13897	-7.6962E-05	-0.15488	-8.5772E-05	553.8079715323117	33.637	0.88436	33.639	33.266	34.15	0.0026016					55	19	4	0	0	0	0.76764	1	2040	2040		34.173	0	1	360760	+		5863	16397	4069	4075	6619	6619					0.05334878928965736
EEIWLAERQEL	11	Unmodified	_EEIWLAERQEL_					0	0	0			REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.5773620605469	3	472.577025	1414.70924	-0.0071393	-3.3739E-06	0.80046	0.00037828	0.79332	0.00037491	472.57740300986404	33.931	0.82567	33.926	33.593	34.419	-0.0047417					29	19	2	0	0	0	0.76579	1	2009	2009		18.531	1.3643	1	142750	+		5864	21795	4070	4076	6620	6620					0.01847804072508552
EEKDYSEQEIQ	11	Unmodified	_EEKDYSEQEIQ_					0	0	0		ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-11|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.5392150878906	3	466.540416	1396.59942	-1.3813	-0.00064444	-1.8531	-0.00086454	-3.2344	-0.001509	466.5398648650698	30.629	1.8414	30.658	29.964	31.805	0.028618					115	41	6	0	0	0	0.54689	1	1999	1999		48.602	7.5215	1	9322400			5865	4207	4071	4077	6621	6621					-0.08301666057332113
EEKPIKELM	9	Unmodified	_EEKPIKELM_					0	0	0			REV__ENSG00000150961|ENST00000280551|SEC24D	REV__ENSG00000150961|ENST00000280551|SEC24D	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8023071289062	2	558.8021	1115.58965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.191	1	31.181	30.681	31.681	-0.010656								0	0	0	0.30416	1	1687	1687		29.15	0.89528	1		+		5866	20225	4072	4078	6622	6622					0.03647519194259985
EEKQRAHLG	9	Unmodified	_EEKQRAHLG_					0	0	0			REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	534.2775268554688	2	534.283254	1066.55196	-0.041397	-2.2117E-05	1.589	0.000849	1.5477	0.00082688	534.2840335710216	109.14	0.481	109.09	108.79	109.27	-0.049332					38	23	2	0	0	0	0.76255	1	11894	11894		35.618	3.984	1	1404000			5867	25178	4073	4079	6623	6623					0.021341890436588073
EEKQRAHLG	9	Unmodified	_EEKQRAHLG_					0	0	0			REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	534.283254	1066.55196	-0.53739	-0.00028712	2.1863	0.0011681	1.6489	0.00088096	534.2842102324114	109.09	0.41521	109.09	108.84	109.26	0	0.016695	0.001659	NaN	35.618	33	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	831720			5868	25178	4073	4079							0.021341890436588073
EEKQRAHLG	9	Unmodified	_EEKQRAHLG_					0	0	0			REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	534.283254	1066.55196	-0.041397	-2.2117E-05	1.589	0.000849	1.5477	0.00082688	534.2840335710216	109.14	0.481	109.09	108.79	109.27	-0.049332	0.015525	0.0010208	NaN	35.618	38	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1404000			5869	25178	4073	4079							0.021341890436588073
EEKQRAHLG	9	Unmodified	_EEKQRAHLG_					0	0	0			REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	534.283254	1066.55196	3.4466	0.0018415	-1.7365	-0.00092781	1.7101	0.00091366	534.2822751928182	109.15	0.53473	109.12	108.81	109.35	-0.029381	0.044032	-0.0025328	NaN	35.618	29	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1362200			5870	25178	4073	4079							0.021341890436588073
EEKQRAHLG	9	Unmodified	_EEKQRAHLG_					0	0	0			REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	534.283254	1066.55196	1.2441	0.00066471	-0.032502	-1.7365E-05	1.2116	0.00064735	534.2831626328042	109.08	0.41547	109.11	108.88	109.29	0.033096	0.03531	-0.0007119	NaN	35.618	28	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1062500			5871	25178	4073	4079							0.021341890436588073
EEKQRAHLG	9	Unmodified	_EEKQRAHLG_					0	0	0			REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	534.283254	1066.55196	0.010096	5.3941E-06	3.6067	0.001927	3.6168	0.0019324	534.2859302808743	108.96	0.77306	109.09	108.51	109.28	0.13026	0.011515	0.0031768	NaN	35.618	29	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1015500			5872	25178	4073	4079							0.021341890436588073
EEKRLWQRRRR	11	Unmodified	_EEKRLWQRRRR_					0	0	0		ENST00000515594.5_1_6:64345874-64401682:+|nuORF	ENST00000515594.5_1_6:64345874-64401682:+|nuORF	ENST00000515594.5_1_6:64345874-64401682:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.2118225097656	4	403.986832	1611.91822	0.83268	0.00033639	2.4423	0.00098667	3.275	0.0013231	404.23850984021163	33.306	0.2114	33.518	33.355	33.566	0.21168					5	4	2	0	0	0	0.18404	1	2404	2404		1.523	1.2107	1	26659			5873	13087	4074	4080	6624	6624					0.13674109939779555
EEKTESEKYRV	11	Unmodified	_EEKTESEKYRV_					0	0	0		ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.53912353515625	3	466.568418	1396.68342	-1.4086	-0.0006572	3.9917	0.0018624	2.5831	0.0012052	466.5702097064347	30.62	0.26571	30.649	30.495	30.76	0.028618					6	5	2	0	0	0	0.17331	1	2011	2011		43.419	5.4789	1	41079			5874	3640	4075	4081	6625	6625					0.0009490983022715227
EELDFQKNI	9	Unmodified	_EELDFQKNI_					0	0	0		nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-6|LMNA;nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA	nc|ENSG00000160789|P02545-5|LMNA	nc|ENSG00000160789|P02545-5|LMNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.787353515625	2	568.285128	1134.5557	-1.1558	-0.00065684	1.5159	0.00086144	0.36003	0.0002046	568.2858652272365	56.829	0.444	56.816	56.609	57.053	-0.012199					23	15	2	0	0	0	0.01944	2	5105	5105;5108		125.81	46.101	1	314260			5875	5606	4076	4082	6626;6627	6626					-0.006191859731416116
EELDFQKNI	9	Unmodified	_EELDFQKNI_					0	0	0		nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-6|LMNA;nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA	nc|ENSG00000160789|P02545-5|LMNA	nc|ENSG00000160789|P02545-5|LMNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.2859497070312	2	568.285128	1134.5557	-0.12793	-7.2699E-05	0.40968	0.00023282	0.28176	0.00016012	568.2853562654882	56.786	0.54734	56.757	56.566	57.113	-0.02866					33	18	3	0	0	0	0.0062975	3	5211	5200;5211;5224		136.27	34.667	1	308280			5876	5606	4076	4082	6628;6629;6630	6629					-0.006191859731416116
EELDFQKNI	9	Unmodified	_EELDFQKNI_					0	0	0		nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-6|LMNA;nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA	nc|ENSG00000160789|P02545-5|LMNA	nc|ENSG00000160789|P02545-5|LMNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.2860107421875	2	568.285128	1134.5557	0.10141	5.7628E-05	-0.077619	-4.411E-05	0.023788	1.3518E-05	568.2852200834831	56.763	0.44301	56.796	56.634	57.077	0.033184					29	13	3	0	0	0	0.051853	1	5146	5146		107.01	22.092	1	342000			5877	5606	4076	4082	6631	6631					-0.006191859731416116
EELEQKYTY	9	Unmodified	_EELEQKYTY_					0	0	0		ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1	ENSG00000115415|ENST00000361099|STAT1	ENSG00000115415|ENST00000361099|STAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.7817993164062	2	601.782418	1201.55028	-0.21089	-0.00012691	-0.097441	-5.8638E-05	-0.30833	-0.00018555	601.7821869254409	45.254	0.65303	45.236	44.837	45.49	-0.018585					28	14	3	0	0	0	0.010555	2	3554	3554;3566		132.76	55.44	1	248680			5878	2841	4077	4083	6632;6633	6632					-0.0424290955561446
EELEQKYTY	9	Unmodified	_EELEQKYTY_					0	0	0		ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1	ENSG00000115415|ENST00000361099|STAT1	ENSG00000115415|ENST00000361099|STAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.2840576171875	2	601.782418	1201.55028	-0.48187	-0.00028998	0.079616	4.7912E-05	-0.40225	-0.00024207	601.7821919626683	45.138	0.52321	45.107	44.885	45.408	-0.031067					25	11	3	0	0	0	0.0062975	1	3642	3642		136.27	37.639	1	230190			5879	2841	4077	4083	6634	6634					-0.0424290955561446
EELEQKYTY	9	Unmodified	_EELEQKYTY_					0	0	0		ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1	ENSG00000115415|ENST00000361099|STAT1	ENSG00000115415|ENST00000361099|STAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.7811279296875	2	601.782418	1201.55028	-1.4548	-0.00087545	0.81629	0.00049123	-0.63847	-0.00038422	601.7827454938068	45.203	0.52204	45.199	44.925	45.447	-0.0041618					28	11	3	0	0	0	0.44421	2	3569	3569;3581		54.776	10.399	1	233320			5880	2841	4077	4083	6635;6636	6635					-0.0424290955561446
EELGFRPEY	9	Unmodified	_EELGFRPEY_					0	0	0		ENSG00000143799|ENST00000366794|PARP1	ENSG00000143799|ENST00000366794|PARP1	ENSG00000143799|ENST00000366794|PARP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.2725830078125	2	570.272021	1138.52949	-0.031427	-1.7922E-05	-0.33118	-0.00018887	-0.36261	-0.00020679	570.2720150954638	57.766	1.2071	57.8	57.475	58.682	0.033905					78	36	5	0	0	0	0.086373	1	5277	5277		95.815	29.386	1	281920			5881	4662	4078	4084	6637	6637					-0.03423455144616128
EELKQQLAL	9	Unmodified	_EELKQQLAL_					0	0	0			REV__ENSG00000168427|ENST00000409223|KLHL30	REV__ENSG00000168427|ENST00000409223|KLHL30	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.80224609375	2	536.305864	1070.59717	-1.1531	-0.0006184	1.1154	0.00059822	-0.037619	-2.0176E-05	536.3062938836811	45.052	0.57086	45.896	45.625	46.196	0.84438					19	13	2	0	0	0	0.20789	1	4169	4169		19.104	0	1	363340	+		5882	21486	4079	4085	6638	6638					0.06469994786175448
EELKSKSKKR	10	Unmodified	_EELKSKSKKR_					0	0	0			REV__nc|ENSG00000131016|Q02952-2|AKAP12	REV__nc|ENSG00000131016|Q02952-2|AKAP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.58380126953125	3	411.582221	1231.72483	1.0715	0.00044102	3.8126	0.0015692	4.8841	0.0020102	411.58372332792885	25.568	2.1598	25.311	24.774	26.934	-0.25721					112	48	3	0	0	0	0.86047	1	1386	1386		17.167	0	1	1250200	+		5883	29841	4080	4086	6639	6639					0.11824135380220469
EELLKRHKGK	10	Unmodified	_EELLKRHKGK_					0	0	0		nc|ENSG00000162267|Q06033-2|ITIH3;ENSG00000162267|ENST00000449956|ITIH3;CON__Q0V8M9	nc|ENSG00000162267|Q06033-2|ITIH3	nc|ENSG00000162267|Q06033-2|ITIH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.3740844726562	2	619.372404	1236.73025	0.60184	0.00037276	-0.93131	-0.00057683	-0.32947	-0.00020406	619.3721424545147	101.51	1.6945	101.55	101.22	102.91	0.044823					109	40	4	0	0	0	0.85466	1	11022	11022		20.947	1.8434	1	2715800		+	5884	604	4081	4087	6640	6640					0.12135858962665225
EELLQLRRN	9	Unmodified	_EELLQLRRN_					0	0	0			REV__nc|ENSG00000168958|Q9GZY8|MFF	REV__nc|ENSG00000168958|Q9GZY8|MFF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.8299560546875	2	585.833111	1169.65167	-0.9232	-0.00054084	-3.7775	-0.002213	-4.7007	-0.0027538	585.8307293050794	57.888	1.4017	57.888	57.479	58.881	0					105	56	3	0	0	0	0.74721	1	5010	5010		37.159	2.0071	1	164040	+		5885	30018	4082	4088	6641	6641					0.07363006657624283
EELNDLIQRF	10	Unmodified	_EELNDLIQRF_					0	0	0		nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-5|PCM1;ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-3|PCM1	nc|ENSG00000078674|Q15154-4|PCM1	nc|ENSG00000078674|Q15154-4|PCM1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	638.8299560546875	2	638.830234	1275.64592	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.441	1	78.497	77.997	78.997	0.056114								0	0	0	0.45132	1	7617	7617		54.722	8.2656	1				5886	1404	4083	4089	6642	6642					0.019118633552807296
EELNDLIQRF	10	Unmodified	_EELNDLIQRF_					0	0	0		nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-5|PCM1;ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-3|PCM1	nc|ENSG00000078674|Q15154-4|PCM1	nc|ENSG00000078674|Q15154-4|PCM1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	638.8304443359375	2	638.830234	1275.64592	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.258	1	78.31	77.81	78.81	0.051674								0	0	0	0.45132	1	7686	7686		46.457	5.0302	1				5887	1404	4083	4089	6643	6643					0.019118633552807296
EELPTLLHF	9	Unmodified	_EELPTLLHF_					0	0	0		nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;ENSG00000155629|ENST00000339364|PIK3AP1	nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1	nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.7944946289062	2	549.795132	1097.57571	-0.56805	-0.00031231	0.36613	0.0002013	-0.20192	-0.00011102	549.7950993088224	82.33	0.78506	82.396	82.043	82.828	0.06591					39	17	3	0	0	0	0.77546	1	8151	8151		31.955	1.4512	1	293430			5888	5331	4084	4090	6644	6644					0.03082609757461796
EELPTLLHF	9	Unmodified	_EELPTLLHF_					0	0	0		nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;ENSG00000155629|ENST00000339364|PIK3AP1	nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1	nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.7946166992188	2	549.795132	1097.57571	1.1659	0.00064098	-1.3673	-0.00075175	-0.20147	-0.00011077	549.7941793027338	82.399	0.7433	82.333	82.019	82.762	-0.065132					37	16	3	0	0	0	0.18566	3	8357	8346;8357;8370		76.847	36.068	1	324950			5889	5331	4084	4090	6645;6646;6647	6646					0.03082609757461796
EELPTLLHF	9	Unmodified	_EELPTLLHF_					0	0	0		nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;ENSG00000155629|ENST00000339364|PIK3AP1	nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1	nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.795166015625	2	549.795132	1097.57571	0.79655	0.00043794	-1.0438	-0.00057389	-0.24727	-0.00013595	549.7943820553005	82.176	0.70215	82.234	81.986	82.688	0.057976					37	15	4	0	0	0	0.1211	2	8212	8212;8224		88.643	28.349	1	337840			5890	5331	4084	4090	6648;6649	6648					0.03082609757461796
EELQQKVSY	9	Unmodified	_EELQQKVSY_					0	0	0		nc|ENSG00000168610|P40763-3|STAT3;nc|ENSG00000168610|P40763-2|STAT3;ENSG00000168610|ENST00000264657|STAT3	nc|ENSG00000168610|P40763-3|STAT3	nc|ENSG00000168610|P40763-3|STAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.2857666015625	2	562.285128	1122.5557	-0.87171	-0.00049015	-0.77855	-0.00043777	-1.6503	-0.00092792	562.284571259443	40.988	0.65017	40.957	40.73	41.38	-0.030991					33	18	3	0	0	0	0.086373	4	2975	2956;2965;2975;2986		95.815	35.878	1	448070			5891	6416	4085	4091	6650;6651;6652;6653	6652					-0.0006718597312556085
EELQQKVSY	9	Unmodified	_EELQQKVSY_					0	0	0		nc|ENSG00000168610|P40763-3|STAT3;nc|ENSG00000168610|P40763-2|STAT3;ENSG00000168610|ENST00000264657|STAT3	nc|ENSG00000168610|P40763-3|STAT3	nc|ENSG00000168610|P40763-3|STAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	562.282958984375	2	562.285128	1122.5557	-0.9429	-0.00053018	-0.75749	-0.00042592	-1.7004	-0.0009561	562.2845141529642	40.879	0.58517	40.838	40.63	41.215	-0.04081					32	17	3	0	0	0	2.0213E-05	4	3042	3033;3042;3051;3064		154.12	68.675	1	521600			5892	6416	4085	4091	6654;6655;6656;6657	6655					-0.0006718597312556085
EELQQKVSY	9	Unmodified	_EELQQKVSY_					0	0	0		nc|ENSG00000168610|P40763-3|STAT3;nc|ENSG00000168610|P40763-2|STAT3;ENSG00000168610|ENST00000264657|STAT3	nc|ENSG00000168610|P40763-3|STAT3	nc|ENSG00000168610|P40763-3|STAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.2865600585938	2	562.285128	1122.5557	-0.59592	-0.00033508	-0.90271	-0.00050758	-1.4986	-0.00084266	562.284430666449	40.861	0.46068	40.868	40.643	41.103	0.0065727					22	12	2	0	0	0	2.4207E-08	4	2969	2960;2969;2980;2993		158.07	59.445	1	497520			5893	6416	4085	4091	6658;6659;6660;6661	6659					-0.0006718597312556085
EELRKRRRGEL	11	Unmodified	_EELRKRRRGEL_					0	0	0		ENST00000367806.7_1_1:169396552-169396627:-|nuORF	ENST00000367806.7_1_1:169396552-169396627:-|nuORF	ENST00000367806.7_1_1:169396552-169396627:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.28302001953125	3	481.283057	1440.82734	0.78447	0.00037755	-0.63085	-0.00030362	0.15362	7.3933E-05	481.2826753418143	101.45	1.7107	101.6	100.6	102.31	0.14352					107	41	3	0	0	0	0.76892	1	10656	10656		17.833	1.9125	1	602290			5894	10571	4086	4092	6662	6662					0.1245622117169205
EELSVRRI	8	Unmodified	_EELSVRRI_					0	0	0			REV__ENST00000549185.5_3_14:31803609-31872202:-|nuORF	REV__ENST00000549185.5_3_14:31803609-31872202:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2903747558594	2	501.290548	1000.56654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.474	1	89.945	89.445	90.445	0.47068								0	0	0	0.29497	1	10604	10604		34.173	5.023	1		+		5895	18823	4087	4093	6663	6663					0.06628261191792717
EELVEICKL	9	Unmodified	_EELVEICKL_					0	0	0		ENST00000452760.2_1_17:20516367-20517318:+|nuORF	ENST00000452760.2_1_17:20516367-20517318:+|nuORF	ENST00000452760.2_1_17:20516367-20517318:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.791015625	2	538.288825	1074.5631	-0.47246	-0.00025432	0.31427	0.00016917	-0.15819	-8.5151E-05	538.7904657837347	66.093	0.48567	66.646	66.412	66.898	0.5526					16	12	2	0	0	0	0.51307	1	7216	7216		51.335	1.8939	1	209260			5896	11926	4088	4094	6664	6664					0.028798303029361705
EELVEICKL	9	Unmodified	_EELVEICKL_					0	0	0		ENST00000452760.2_1_17:20516367-20517318:+|nuORF	ENST00000452760.2_1_17:20516367-20517318:+|nuORF	ENST00000452760.2_1_17:20516367-20517318:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	538.288825	1074.5631	0.020248	1.0899E-05	0.4854	0.00026129	0.50565	0.00027218	538.2888540486003	66.302	0.5346	66.688	66.316	66.851	0.38581	0.021128	9.7935E-05	NaN	51.335	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130850			5897	11926	4088	4094							0.028798303029361705
EELVVMGAPG	10	Oxidation (M)	_EELVVM(Oxidation (M))GAPG_		EELVVM(1)GAPG		EELVVM(44)GAPG	0	0	1		ENSG00000144668|ENST00000264741|ITGA9	ENSG00000144668|ENST00000264741|ITGA9	ENSG00000144668|ENST00000264741|ITGA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.25201416015625	2	509.2497	1016.48485	0.0098395	5.0107E-06	4.4198	0.0022508	4.4296	0.0022558	509.2517561622594	45.726	0.99979	46.621	46.327	47.327	0.89542					60	24	3	0	0	0	0.71042	1	4300	4300		44.117	11.304	1	2046500			5898	4725	4089	4095	6665	6665		83			-0.022736022822982704
EEMPWLLSVPP	11	Unmodified	_EEMPWLLSVPP_					0	0	0			REV__ENST00000374831.8_1_6:32938956-32939746:+|nuORF	REV__ENST00000374831.8_1_6:32938956-32939746:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.222412109375	3	433.221413	1296.64241	0.63159	0.00027362	2.1767	0.00094298	2.8083	0.0012166	433.22224808643284	61.796	0.94312	61.826	61.454	62.397	0.029575					63	25	3	0	0	0	0.73621	1	5769	5769		25.126	0.89417	1	1002700	+		5899	25798	4090	4096	6666	6666					0.005954772570703426
EEMRPAGH	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))EEMRPAGH_					1	0	0		chr1:172453189-172456415|30|65.57|0.87|6.24|+|ENST00000367725|C1orf105,C1orf105	chr1:172453189-172456415|30|65.57|0.87|6.24|+|ENST00000367725|C1orf105,C1orf105	chr1:172453189-172456415|30|65.57|0.87|6.24|+|ENST00000367725|C1orf105,C1orf105	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.71771240234375	2	484.716359	967.418164	1.8013	0.0008731	1.5623	0.00075728	3.3636	0.0016304	484.7169664229347	101.81	0.75056	102.08	101.6	102.35	0.26322					38	19	3	0	0	0	0.79972	1	12361	12361		62.978	9.627	1	841770			5900	34	4091	4097	6667	6667					-0.06684793053545945
EEMTFSGLYLI	11	Unmodified	_EEMTFSGLYLI_					0	0	0			REV__ENST00000529251.1_1_11:59620450-59622140:-|nuORF	REV__ENST00000529251.1_1_11:59620450-59622140:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.8839111328125	3	434.881057	1301.62134	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.31	1	113.33	112.83	113.83	0.020027								0	0	0	0.56276	1	13689	13689		23.378	0.81632	1		+		5901	28263	4092	4098	6668	6668					-0.017405328424274558
EEMVLRLQKE	10	Unmodified	_EEMVLRLQKE_					0	0	0		ENSG00000163440|ENST00000295645|PDCL2	ENSG00000163440|ENST00000295645|PDCL2	ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.8448486328125	2	637.842287	1273.67002	1.438	0.00091722	3.6682	0.0023398	5.1062	0.003257	637.8446527464371	43.773	1.3238	43.781	43.309	44.632	0.0084534					84	31	4	0	0	0	0.34329	1	3016	3016		68.846	15.909	1	2342900			5902	5798	4093	4099	6669	6669					0.044133805172805296
EENMALYF	8	Unmodified	_EENMALYF_					0	0	0			REV__ENST00000441829.2_9:44302237-44303615:+|nuORF	REV__ENST00000441829.2_9:44302237-44303615:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.7239990234375	2	508.723318	1015.43208	-0.056826	-2.8909E-05	2.2505	0.0011449	2.1937	0.001116	508.7241863577969	66.842	0.5735	66.858	66.586	67.159	0.016205					37	26	2	0	0	0	0.89962	1	6275	6275		38.806	1.647	1	108960	+		5903	26762	4094	4100	6670	6670					-0.07501560345122016
EENRQKLSL	9	Unmodified	_EENRQKLSL_					0	0	0		ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.803466796875	2	558.80402	1115.59349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.181	1	31.134	30.634	31.634	-0.047064								0	0	0	0.32039	1	1747	1747		44.117	1.7207	1				5904	1829	4095	4101	6671	6671					0.04031325012351772
EENTNILKF	9	Unmodified	_EENTNILKF_					0	0	0		ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.287109375	2	554.287671	1106.56079	-0.81094	-0.00044949	0.24528	0.00013596	-0.56565	-0.00031354	554.2876595285483	60.14	0.93211	60.127	59.719	60.651	-0.013729					69	23	5	0	0	0	1.2037E-08	5	5547	5536;5547;5558;5571;5581		162.25	40.076	1	1684300			5905	4304	4096	4102	6672;6673;6674;6675;6676	6673					0.011771178894832701
EENTNILKF	9	Unmodified	_EENTNILKF_					0	0	0		ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.2874145507812	2	554.287671	1106.56079	0.7182	0.00039809	-1.2345	-0.00068425	-0.51625	-0.00028615	554.2868521242876	60.037	1.294	60.005	59.612	60.906	-0.031727					86	35	4	0	0	0	1.2037E-08	8	5643	5615;5624;5633;5643;5655;5667;5676;5686		162.25	41.631	1	1840800			5906	4304	4096	4102	6677;6678;6679;6680;6681;6682;6683;6684	6680					0.011771178894832701
EENTNILKF	9	Unmodified	_EENTNILKF_					0	0	0		ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.2874755859375	2	554.287671	1106.56079	-0.53856	-0.00029852	0.14269	7.9089E-05	-0.39588	-0.00021943	554.2876480394447	59.978	1.0198	60.01	59.603	60.623	0.032822					78	26	4	0	0	0	3.7454E-20	6	5569	5530;5537;5549;5559;5569;5580		176.09	55.466	1	1883900			5907	4304	4096	4102	6685;6686;6687;6688;6689;6690	6689					0.011771178894832701
EEPGNGTFTV	10	Unmodified	_EEPGNGTFTV_					0	0	0		ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7822265625	2	525.740554	1049.46655	-0.37987	-0.00019971	-1.5846	-0.00083308	-1.9644	-0.0010328	525.740076119052	47.403	0.24634	47.874	47.65	47.896	0.47139					9	5	2	0	0	0	0.37624	1	4487	4487		39.253	3.6345	1	657590			5908	5747	4097	4103	6691	6691					-0.05620020932656189
EEPHSIEAF	9	Unmodified	_EEPHSIEAF_					0	0	0			REV__nc|ENSG00000138795|Q9UJU2-2|LEF1	REV__nc|ENSG00000138795|Q9UJU2-2|LEF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.7487182617188	2	529.743096	1057.47164	-1.5127	-0.00080137	2.0697	0.0010964	0.55694	0.00029504	529.7440524386839	87.807	0.26021	87.976	87.781	88.041	0.16923					8	5	2	0	0	0	0.20789	1	8633	8633		6.7355	0	1	29873	+		5909	19507	4098	4104	6692	6692					-0.05479717070056722
EEPNKLLVS	9	Unmodified	_EEPNKLLVS_					0	0	0			REV__nc|ENSG00000040487|Q6ZP29-2|SLC66A1	REV__nc|ENSG00000040487|Q6ZP29-2|SLC66A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7996826171875	2	514.784764	1027.55498	0.56035	0.00028846	4.4416	0.0022865	5.002	0.0025749	514.7871138183269	16.283	0.18476	15.685	15.601	15.786	-0.59873					5	3	2	0	0	0	0.20789	1	111	111		32.812	0	1	22235	+		5910	16317	4099	4105	6693	6693					0.04230019377791905
EEPQEEEVY	9	Unmodified	_EEPQEEEVY_					0	0	0			REV__ENST00000577734.1_1_18:46570427-46619646:-|nuORF	REV__ENST00000577734.1_1_18:46570427-46619646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.2429809570312	2	576.240583	1150.46661	-0.30586	-0.00017625	0.90185	0.00051968	0.59599	0.00034343	576.2409934715854	70.623	0.50249	70.661	70.423	70.925	0.038055					47	26	2	0	0	0	0.48102	1	6763	6763		52.937	19.421	1	254570	+		5911	19703	4100	4106	6694	6694					-0.10260065723332445
EEPQEEEVY	9	Unmodified	_EEPQEEEVY_					0	0	0			REV__ENST00000577734.1_1_18:46570427-46619646:-|nuORF	REV__ENST00000577734.1_1_18:46570427-46619646:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	576.240583	1150.46661	-0.99272	-0.00057204	1.7923	0.0010328	0.7996	0.00046076	576.2415705709535	70.867	0.59331	70.901	70.646	71.239	0.034004	0.14666	0.00042573	NaN	52.937	47	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	198760	+		5912	19703	4100	4106							-0.10260065723332445
EEPQEEEVY	9	Unmodified	_EEPQEEEVY_					0	0	0			REV__ENST00000577734.1_1_18:46570427-46619646:-|nuORF	REV__ENST00000577734.1_1_18:46570427-46619646:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	576.240583	1150.46661	-0.30586	-0.00017625	0.90185	0.00051968	0.59599	0.00034343	576.2409934715854	70.623	0.50249	70.661	70.423	70.925	0.038055	-0.09319	-0.00060051	NaN	52.937	47	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254570	+		5913	19703	4100	4106							-0.10260065723332445
EEPTVIKKY	9	Unmodified	_EEPTVIKKY_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF	ENSG00000089006|ENST00000377759|SNX5	ENSG00000089006|ENST00000377759|SNX5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8075561523438	2	553.808239	1105.60193	-0.66564	-0.00036864	0.62911	0.00034841	-0.036522	-2.0226E-05	553.8083797428066	33.72	0.74817	33.723	33.39	34.138	0.0030785					48	17	4	0	0	0	0.041233	4	1972	1964;1972;1992;2005		111.65	48.342	1	326730			5914	1602	4101	4107	6695;6696;6697;6698	6696					0.05334878928965736
EEPTVIKKY	9	Unmodified	_EEPTVIKKY_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF	ENSG00000089006|ENST00000377759|SNX5	ENSG00000089006|ENST00000377759|SNX5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8079833984375	2	553.808239	1105.60193	0.10985	6.0836E-05	-0.060415	-3.3459E-05	0.049435	2.7377E-05	553.8080489034816	33.816	1.012	33.759	33.25	34.262	-0.056385					60	22	4	0	0	0	0.026451	4	2078	2068;2078;2089;2100		120.62	57.315	1	405460			5915	1602	4101	4107	6699;6700;6701;6702	6700					0.05334878928965736
EEPTVIKKY	9	Unmodified	_EEPTVIKKY_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF	ENSG00000089006|ENST00000377759|SNX5	ENSG00000089006|ENST00000377759|SNX5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8077392578125	2	553.808239	1105.60193	-0.015909	-8.8104E-06	-0.13897	-7.6962E-05	-0.15488	-8.5772E-05	553.8079715323117	33.637	0.88436	33.639	33.266	34.15	0.0026016					55	19	4	0	0	0	0.12652	4	1989	1989;1999;2021;2033		87.754	15.943	1	360760			5916	1602	4101	4107	6703;6704;6705;6706	6703					0.05334878928965736
EEPVPGELLK	10	Unmodified	_EEPVPGELLK_					0	0	0			REV__ENSG00000185567|ENST00000333244|AHNAK2	REV__ENSG00000185567|ENST00000333244|AHNAK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.8058471679688	2	555.805697	1109.59684	0.60306	0.00033519	0.28732	0.0001597	0.89039	0.00049488	555.8058596717976	59.48	0.90499	59.448	59.077	59.982	-0.031731					51	22	3	0	0	0	0.5766	1	5543	5543		51.335	1.8939	1	344520	+		5917	22775	4102	4108	6707	6707					0.04642575066327481
EEQAKQLK	8	Unmodified	_EEQAKQLK_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.26904296875	2	487.269281	972.52401	-1.38	-0.00067244	1.2041	0.0005867	-0.17598	-8.5747E-05	487.2698048967584	29.28	1.924	29.261	27.915	29.839	-0.019407					106	57	3	0	0	0	0.38363	1	1452	1452		90.777	3.0802	1	505130	+		5918	20278	4103	4109	6708	6708					0.03664866063559202
EEQEILRQI	9	Unmodified	_EEQEILRQI_					0	0	0			REV__ENST00000462668.5_1_3:160131924-160151594:+|nuORF	REV__ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.3119506835938	2	579.311677	1156.6088	-1.7316	-0.0010032	1.9658	0.0011388	0.2342	0.00013568	579.3128011957193	28.572	0.61462	28.475	28.184	28.798	-0.096945					30	14	3	0	0	0	0.24527	1	1744	1744		69.628	12.907	1	217390	+		5919	18016	4104	4110	6709	6709					0.03676191809518059
EEQEILRQI	9	Unmodified	_EEQEILRQI_					0	0	0			REV__ENST00000462668.5_1_3:160131924-160151594:+|nuORF	REV__ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	579.311677	1156.6088	0.046949	2.7198E-05	0.047184	2.7334E-05	0.094134	5.4533E-05	579.3118617476703	28.702	0.64075	28.529	28.249	28.89	-0.17336	0.026873	-0.00109	NaN	69.628	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	238610	+		5920	18016	4104	4110							0.03676191809518059
EEQIRKVPK	9	Unmodified	_EEQIRKVPK_					0	0	0			REV__ENSG00000096433|ENST00000605930|ITPR3	REV__ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.83251953125	2	563.83258	1125.65061	1.1189	0.00063088	-1.0374	-0.00058491	0.081525	4.5967E-05	563.8318646992443	22.052	0.8838	21.609	21.235	22.119	-0.44324					49	19	3	0	0	0	0.17181	1	881	881		79.713	2.395	1	572300	+		5921	17076	4105	4111	6710	6710					0.09280792288700468
EEQITKFEKL	10	Unmodified	_EEQITKFEKL_					0	0	0			REV__nc|ENSG00000151136|A6QL63-2|ABTB3	REV__nc|ENSG00000151136|A6QL63-2|ABTB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.23077392578125	3	422.230966	1263.67107	1.1419	0.00048216	-0.91254	-0.0003853	0.22938	9.6853E-05	422.2305028676614	33.421	0.66919	33.632	33.355	34.024	0.21168					43	15	4	0	0	0	0.47091	1	2417	2417		53.597	0	1	1004500	+		5922	20237	4106	4112	6711	6711					0.04977918157851491
EEREHGSH	8	Unmodified	_EEREHGSH_					0	0	0			REV__ENSG00000164031|ENST00000442697|DNAJB14	REV__ENSG00000164031|ENST00000442697|DNAJB14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.7143859863281	2	490.712662	979.410771	1.1619	0.00057018	0.61372	0.00030116	1.7756	0.00087133	490.7130625039328	98.889	1.7535	99.25	98.566	100.32	0.36136					108	43	4	0	0	0	0.884	1	11972	11972		33.516	3.0119	1	2946000	+		5923	21010	4107	4113	6712	6712					-0.07975809329604999
EERERLQKE	9	Unmodified	_EERERLQKE_					0	0	0		ENSG00000182827|ENST00000366812|ACBD3	ENSG00000182827|ENST00000366812|ACBD3	ENSG00000182827|ENST00000366812|ACBD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	607.8291015625	2	608.817658	1215.62076	0.98978	0.00060259	-3.1567	-0.0019218	-2.1669	-0.0013192	609.317134880114	16.607	0.18315	16.12	16.006	16.189	-0.48718					5	3	2	0	0	0	0.20789	1	151	151		29.17	2.374	1	26035			5924	7475	4108	4114	6713	6713					0.02157808552692586
EERFQRQAIFP	11	Unmodified	_EERFQRQAIFP_					0	0	0		ENSG00000186094|ENST00000371839|AGBL4;nc|ENSG00000186094|Q5VU57-2|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	474.2500305175781	3	474.249242	1419.7259	0.38785	0.00018394	-3.1584	-0.0014979	-2.7706	-0.0013139	474.2478013564301	28.226	0.59696	28.262	28.021	28.618	0.03607					44	20	3	0	0	0	0.76579	1	1326	1326		18.531	0.69791	1	75066			5925	7772	4109	4115	6714	6714					0.03282349749133573
EERKKQLA	8	Unmodified	_EERKKQLA_					0	0	0			REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2903747558594	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.91472	1	8777	8777		44.117	4.864	1	2850500	+		5926	20827	4110	4116	6715	6715					0.06628261191804086
EERKQRRLE	9	Unmodified	_EERKQRRLE_					0	0	0			REV__ENST00000482470.5_1_7:134552484-134644871:+|nuORF	REV__ENST00000482470.5_1_7:134552484-134644871:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	622.3466186523438	2	622.346917	1242.67928	1.3041	0.0008116	-0.61107	-0.0003803	0.69303	0.00043131	622.3465977924652	95.841	2.6338	96.072	95.148	97.782	0.23103					155	62	3	0	0	0	0.76255	1	9890	9890		35.618	0	1	379700	+		5927	18516	4111	4117	6716	6716					0.06764909917842488
EERLNGEL	8	Unmodified	_EERLNGEL_					0	0	0			REV__nc|ENSG00000167994|Q8TBN0-2|RAB3IL1	REV__nc|ENSG00000167994|Q8TBN0-2|RAB3IL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.24298095703125	2	480.243264	958.471974	-1.848	-0.00088747	2.0889	0.0010032	0.24097	0.00011572	480.24400212311673	32.713	0.57332	32.713	32.476	33.049	0					49	27	3	0	0	0	0.93293	1	1637	1637		51.335	5.3835	1	131570	+		5928	15497	4112	4118	6717	6717					-0.008922973501853448
EERPGLLGA	9	Unmodified	_EERPGLLGA_					0	0	0		ENSG00000122859|ENST00000242462|NEUROG3	ENSG00000122859|ENST00000242462|NEUROG3	ENSG00000122859|ENST00000242462|NEUROG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2561950683594	2	471.256174	940.497795	-0.96244	-0.00045355	0.69954	0.00032966	-0.2629	-0.00012389	471.2564956140925	29.771	2.7125	29.799	28.794	31.507	0.028618					148	61	5	0	0	0	0.30689	1	1959	1959		64.207	3.2353	1	7198000			5929	3248	4113	4119	6718	6718					0.025165968920987325
EERPGLLGA	9	Unmodified	_EERPGLLGA_					0	0	0		ENSG00000122859|ENST00000242462|NEUROG3	ENSG00000122859|ENST00000242462|NEUROG3	ENSG00000122859|ENST00000242462|NEUROG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2559814453125	2	471.256174	940.497795	-0.36059	-0.00016993	-0.0056518	-2.6634E-06	-0.36624	-0.0001726	471.2561536641347	29.907	2.3297	29.817	29.233	31.563	-0.089546					133	53	5	0	0	0	0.24527	1	1996	1996		69.628	0.8408	1	8235200			5930	3248	4113	4119	6719	6719					0.025165968920987325
EERPGLLGPG	10	Unmodified	_EERPGLLGPG_					0	0	0			REV__chr19:49427820-49427946|14|27.64|0.0|21.4|+|2|TE_info:MSR1,MSR1_dup172,Satellite,Satellite,donor,-,49427616,49427820|None,GFY|3	REV__chr19:49427820-49427946|14|27.64|0.0|21.4|+|2|TE_info:MSR1,MSR1_dup172,Satellite,Satellite,donor,-,49427616,49427820|None,GFY|3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.7740478515625	2	512.774731	1023.53491	-1.4965	-0.00076736	0.77005	0.00039486	-0.72642	-0.00037249	512.7750166374884	45.034	0.8504	45.034	44.739	45.589	0					37	20	3	0	0	0	0.64457	1	3338	3338		47.657	0	1	378360	+		5931	15719	4114	4120	6720	6720					0.024082684378640806
EERQVPGV	8	Unmodified	_EERQVPGV_					0	0	0		ENST00000264663.9_1_5:43602840-43609347:+|nuORF	ENST00000264663.9_1_5:43602840-43609347:+|nuORF	ENST00000264663.9_1_5:43602840-43609347:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2638244628906	2	457.240524	912.466495	-0.054652	-2.4989E-05	-2.862	-0.0013086	-2.9166	-0.0013336	457.23909303773314	80.991	1.6049	81.491	81.093	82.697	0.49966					56	39	2	0	0	0	0.4196	1	9455	9455		23.042	0	1	817270			5932	9485	4115	4121	6721	6721					0.006760238580113764
EERRLAAL	8	Unmodified	_EERRLAAL_					0	0	0		nc|ENSG00000181800|Q8N7Q2|CELF2-AS1	nc|ENSG00000181800|Q8N7Q2|CELF2-AS1	nc|ENSG00000181800|Q8N7Q2|CELF2-AS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.278564453125	2	479.277441	956.540328	-0.90579	-0.00043413	1.2321	0.00059054	0.32635	0.00015641	479.2779542538447	97.646	1.4109	97.646	97.118	98.528	0					77	33	3	0	0	0	0.86288	1	9809	9809		26.796	0	1	589630			5933	15137	4116	4122	6722	6722					0.06031992020314192
EERTMKEGRK	10	Unmodified	_EERTMKEGRK_					0	0	0			REV__nc|ENSG00000203965|A8K855-2|EFCAB7	REV__nc|ENSG00000203965|A8K855-2|EFCAB7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.30010986328125	3	421.887316	1262.64012	0.98529	0.00041568	0.8293	0.00034987	1.8146	0.00076555	422.2203291954087	88.324	0.32031	88.773	88.635	88.955	0.44893					9	7	2	0	0	0	0.37624	1	10379	10379		33.922	13.891	1	54337	+		5934	23449	4117	4123	6723	6723					0.019304415719489043
EERTVEEKV	9	Unmodified	_EERTVEEKV_					0	0	0			REV__ENST00000532830.5_1_11:67124306-67124438:-|nuORF	REV__ENST00000532830.5_1_11:67124306-67124438:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	559.7894287109375	2	559.788035	1117.56152	-1.0955	-0.00061324	-4.0635	-0.0022747	-5.159	-0.0028879	559.785750415794	77.907	0.40295	77.959	77.735	78.138	0.052704					27	17	2	0	0	0	0.71772	1	7556	7556		39.253	3.6345	1	100870	+		5935	28332	4118	4124	6724	6724					0.007439125385189982
EESAGLRW	8	Unmodified	_EESAGLRW_					0	0	0		nc|ENSG00000115844|Q07687-2|DLX2	nc|ENSG00000115844|Q07687-2|DLX2	nc|ENSG00000115844|Q07687-2|DLX2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.80560302734375	2	474.232699	946.450845	0.898	0.00042586	3.1218	0.0014805	4.0198	0.0019063	474.2340834245605	19.857	1.6148	19.387	18.655	20.269	-0.46967					52	34	2	0	0	0	0.4196	1	483	483		30.504	3.7075	1	68057			5936	14860	4119	4125	6725	6725					-0.0245226265905103
EESAGLRW	8	Unmodified	_EESAGLRW_					0	0	0		nc|ENSG00000115844|Q07687-2|DLX2	nc|ENSG00000115844|Q07687-2|DLX2	nc|ENSG00000115844|Q07687-2|DLX2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	474.232699	946.450845	-1.0271	-0.00048707	5.7567	0.00273	4.7297	0.002243	474.2353797363979	18.976	0.28535	19.02	18.884	19.169	0.043747	-0.20213	0.0017627	NaN	23.042	14	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24038			5937	14860	4119	4125							-0.0245226265905103
EESDDESTELD	11	Unmodified	_EESDDESTELD_					0	0	0			REV__ENST00000478396.1_1_2:160615857-160623850:+|nuORF	REV__ENST00000478396.1_1_2:160615857-160623850:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.7362060546875	2	634.736059	1267.45757	-0.25236	-0.00016018	1.3603	0.00086341	1.1079	0.00070324	634.7369274198732	31.286	0.71913	31.235	30.8	31.52	-0.051033					34	17	3	0	0	0	0.76322	1	1743	1743		19.104	1.6355	1	69201	+		5938	19318	4120	4126	6726	6726					-0.16546503870335982
EESDLSRQY	9	Unmodified	_EESDLSRQY_					0	0	0		nc|ENSG00000077235|Q12789-3|GTF3C1;ENSG00000077235|ENST00000356183|GTF3C1	nc|ENSG00000077235|Q12789-3|GTF3C1	nc|ENSG00000077235|Q12789-3|GTF3C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.7534790039062	2	563.754192	1125.49383	-1.2767	-0.00071977	1.4852	0.0008373	0.20848	0.00011753	563.7548160979185	35.297	0.63218	35.285	34.976	35.608	-0.012203					34	14	3	0	0	0	0.19818	2	2196	2169;2196		74.255	20.904	1	216460			5939	1375	4121	4127	6727;6728	6728					-0.06389537392283273
EESDLSRQY	9	Unmodified	_EESDLSRQY_					0	0	0		nc|ENSG00000077235|Q12789-3|GTF3C1;ENSG00000077235|ENST00000356183|GTF3C1	nc|ENSG00000077235|Q12789-3|GTF3C1	nc|ENSG00000077235|Q12789-3|GTF3C1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.7522583007812	2	563.754192	1125.49383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.308	1	35.251	34.751	35.751	-0.056385								0	0	0	0.22756	1	2275	2275		66.429	20.477	1				5940	1375	4121	4127	6729	6729					-0.06389537392283273
EESDLSRQY	9	Unmodified	_EESDLSRQY_					0	0	0		nc|ENSG00000077235|Q12789-3|GTF3C1;ENSG00000077235|ENST00000356183|GTF3C1	nc|ENSG00000077235|Q12789-3|GTF3C1	nc|ENSG00000077235|Q12789-3|GTF3C1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.7542114257812	2	563.754192	1125.49383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.398	1	35.341	34.841	35.841	-0.056122								0	0	0	0.069407	1	2287	2287		82.241	32.799	1				5941	1375	4121	4127	6730	6730					-0.06389537392283273
EESDLSRQY	9	Unmodified	_EESDLSRQY_					0	0	0		nc|ENSG00000077235|Q12789-3|GTF3C1;ENSG00000077235|ENST00000356183|GTF3C1	nc|ENSG00000077235|Q12789-3|GTF3C1	nc|ENSG00000077235|Q12789-3|GTF3C1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.753662109375	2	563.754192	1125.49383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.488	1	35.432	34.932	35.932	-0.055904								0	0	0	0.00062554	1	2299	2299		113.41	36.565	1				5942	1375	4121	4127	6731	6731					-0.06389537392283273
EESDLSRQY	9	Unmodified	_EESDLSRQY_					0	0	0		nc|ENSG00000077235|Q12789-3|GTF3C1;ENSG00000077235|ENST00000356183|GTF3C1	nc|ENSG00000077235|Q12789-3|GTF3C1	nc|ENSG00000077235|Q12789-3|GTF3C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.7537841796875	2	563.754192	1125.49383	-0.26959	-0.00015198	0.24845	0.00014007	-0.021135	-1.1915E-05	563.7541318600184	35.276	0.64059	35.283	35.016	35.656	0.0063934					33	14	3	0	0	0	0.044173	4	2216	2194;2205;2216;2229		110.12	38.124	1	217680			5943	1375	4121	4127	6732;6733;6734;6735	6734					-0.06389537392283273
EESFFILKY	9	Unmodified	_EESFFILKY_					0	0	0		ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	ENSG00000184432|ENST00000333188|COPB2	ENSG00000184432|ENST00000333188|COPB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	588.3033447265625	2	588.30279	1174.59103	-0.7012	-0.00041252	1.0224	0.00060147	0.32119	0.00018896	588.3031740612654	80.447	0.8185	80.509	80.19	81.009	0.062225					56	24	3	0	0	0	0.084975	3	7875	7875;7886;7896		96.19	21.951	1	478690			5944	7610	4122	4128	6736;6737;6738	6736					0.010714765546708804
EESFFILKY	9	Unmodified	_EESFFILKY_					0	0	0		ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	ENSG00000184432|ENST00000333188|COPB2	ENSG00000184432|ENST00000333188|COPB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	588.3030395507812	2	588.30279	1174.59103	0.83551	0.00049154	-0.70548	-0.00041504	0.13003	7.6498E-05	588.3022507776642	80.558	0.86015	80.498	80.23	81.09	-0.059692					39	22	2	0	0	0	0.032438	3	8109	8089;8098;8109		116.9	34.599	1	481880			5945	7610	4122	4128	6739;6740;6741	6741					0.010714765546708804
EESFFILKY	9	Unmodified	_EESFFILKY_					0	0	0		ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	ENSG00000184432|ENST00000333188|COPB2	ENSG00000184432|ENST00000333188|COPB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	588.3030395507812	2	588.30279	1174.59103	-1.1324	-0.00066617	1.6735	0.0009845	0.54111	0.00031833	588.3032627670148	80.332	1.0104	80.388	80.072	81.082	0.055916					64	27	4	0	0	0	0.01944	2	7967	7945;7967		125.81	35.037	1	454470			5946	7610	4122	4128	6742;6743	6743					0.010714765546708804
EESIRGHTLIK	11	Unmodified	_EESIRGHTLIK_					0	0	0		nc|ENSG00000134755|Q02487-2|DSC2;nc|ENSG00000134765|Q08554-2|DSC1	nc|ENSG00000134755|Q02487-2|DSC2	nc|ENSG00000134755|Q02487-2|DSC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.860595703125	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.66929	3	12701	12701;12892;13000		36.447	4.7516	1	27133000			5947	14934	4123	4129	6744;6745;6746	6744					0.07451545000549231
EESLIDMR	8	Unmodified	_EESLIDMR_					0	0	0		nc|ENSG00000070748|P28329-3|CHAT;nc|ENSG00000070748|P28329-2|CHAT;ENSG00000070748|ENST00000337653|CHAT	nc|ENSG00000070748|P28329-3|CHAT	nc|ENSG00000070748|P28329-3|CHAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	496.7375183105469	2	496.739499	991.464446	-2.2628	-0.001124	-1.0603	-0.00052668	-3.3231	-0.0016507	496.73875681685496	59.414	0.74281	59.447	59.09	59.833	0.032822					41	17	3	0	0	0	0.89043	1	5521	5521		35.618	1.4457	1	440220			5948	1250	4124	4130	6747	6747					-0.03162772942118863
EESLKARLSA	10	Unmodified	_EESLKARLSA_					0	0	0			REV__ENSG00000118898|ENST00000345988|PPL	REV__ENSG00000118898|ENST00000345988|PPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3062744140625	2	552.306395	1102.59824	-1.4446	-0.00079788	1.6112	0.00088988	0.16659	9.2009E-05	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.86272	1	9228	9228		24.519	1.4767	1	1677300	+		5949	18330	4125	4131	6748	6748					0.05104209155092576
EESPRVKRI	9	Unmodified	_EESPRVKRI_					0	0	0			REV__nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2	REV__nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.3206787109375	2	557.32238	1112.63021	0.16012	8.9236E-05	-0.34617	-0.00019293	-0.18605	-0.00010369	557.3220364322606	27.912	0.56432	27.873	27.553	28.117	-0.038525					24	12	3	0	0	0	0.78983	1	1383	1383		27.882	0	1	42913	+		5950	29954	4126	4132	6749	6749					0.07839621628886562
EESRGNNQW	9	Unmodified	_EESRGNNQW_					0	0	0		ENSG00000099860|ENST00000215631|GADD45B;ENST00000592937.1_1_19:2477233-2477596:+|nuORF	ENSG00000099860|ENST00000215631|GADD45B	ENSG00000099860|ENST00000215631|GADD45B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.2440795898438	2	560.244326	1118.4741	0.071167	3.9871E-05	-0.082269	-4.6091E-05	-0.011102	-6.2199E-06	560.2441559527115	27.069	0.58004	27.03	26.765	27.345	-0.038525					34	14	3	0	0	0	0.38563	3	1284	1265;1273;1284		58.782	18.209	1	81704			5951	1771	4127	4133	6750;6751;6752	6752					-0.0803986861235444
EESSSDQLRPD	11	Unmodified	_EESSSDQLRPD_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.5205078125	3	421.521356	1261.54224	-0.33221	-0.00014003	-1.069	-0.00045061	-1.4012	-0.00059065	421.52073405574936	31.428	0.69798	31.377	31.127	31.825	-0.051031					37	15	4	0	0	0	0.72374	1	1783	1783		27.644	8.3812	1	94572	+		5952	23285	4128	4134	6753	6753					-0.07807088543063401
EESWEKSSV	9	Unmodified	_EESWEKSSV_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.7459716796875	2	540.745836	1079.47712	-0.21758	-0.00011766	0.10719	5.7961E-05	-0.11039	-5.9694E-05	540.7458215820643	60.616	0.40513	60.604	60.356	60.761	-0.012203					16	9	2	0	0	0	0.6204	1	5623	5623		45.972	3.5761	1	96507			5953	15072	4129	4135	6754	6754					-0.05944038278221342
EESWEKSSV	9	Unmodified	_EESWEKSSV_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	540.745836	1079.47712	1.0041	0.00054294	-1.3326	-0.00072062	-0.32859	-0.00017769	540.745124815206	60.527	0.40647	60.495	60.284	60.69	-0.032509	-0.029048	-0.00075256	NaN	45.972	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97221			5954	15072	4129	4135							-0.05944038278221342
EESWEKSSV	9	Unmodified	_EESWEKSSV_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	540.745836	1079.47712	-0.58123	-0.0003143	-0.39341	-0.00021273	-0.97464	-0.00052704	540.745628100806	60.441	0.37877	60.472	60.242	60.621	0.0312	-0.051569	0.00026321	NaN	45.972	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72637			5955	15072	4129	4135							-0.05944038278221342
EETETVTKSY	10	Unmodified	_EETETVTKSY_					0	0	0		ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-6|CALD1;nc|ENSG00000122786|Q05682-2|CALD1;ENSG00000122786|ENST00000361675|CALD1	ENST00000482470.5_1_7:134552484-134644871:+|nuORF	ENST00000482470.5_1_7:134552484-134644871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	593.7767944335938	2	593.777333	1185.54011	-0.45782	-0.00027184	0.45262	0.00026876	-0.0052016	-3.0886E-06	593.7773988583936	33.19	0.75094	33.193	32.85	33.601	0.0030785					45	16	4	0	0	0	0.00048997	3	1923	1901;1911;1923		141.52	67.546	1	582240			5956	3247	4130	4136	6755;6756;6757	6757					-0.045235172808588686
EETETVTKSY	10	Unmodified	_EETETVTKSY_					0	0	0		ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-6|CALD1;nc|ENSG00000122786|Q05682-2|CALD1;ENSG00000122786|ENST00000361675|CALD1	ENST00000482470.5_1_7:134552484-134644871:+|nuORF	ENST00000482470.5_1_7:134552484-134644871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	593.7774658203125	2	593.777333	1185.54011	0.18634	0.00011064	-0.22014	-0.00013071	-0.033799	-2.0069E-05	593.7770276793623	33.365	0.90816	33.309	33.004	33.912	-0.056385					53	21	4	0	0	0	6.5442E-24	4	2017	2009;2017;2031;2044		176.44	78.972	1	677070			5957	3247	4130	4136	6758;6759;6760;6761	6759					-0.045235172808588686
EETETVTKSY	10	Unmodified	_EETETVTKSY_					0	0	0		ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-6|CALD1;nc|ENSG00000122786|Q05682-2|CALD1;ENSG00000122786|ENST00000361675|CALD1	ENST00000482470.5_1_7:134552484-134644871:+|nuORF	ENST00000482470.5_1_7:134552484-134644871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.7771606445312	2	593.777333	1185.54011	-1.8202	-0.0010808	1.8557	0.0011019	0.035517	2.1089E-05	593.7782938780687	33.189	0.87395	33.187	32.87	33.744	-0.0016327					51	20	4	0	0	0	5.0316E-17	3	1934	1924;1934;1947		172.25	84.552	1	627830			5958	3247	4130	4136	6762;6763;6764	6763					-0.045235172808588686
EETLPFLSKM	10	Unmodified	_EETLPFLSKM_					0	0	0			REV__ENST00000264951.8_1_3:142051219-142051342:-|nuORF	REV__ENST00000264951.8_1_3:142051219-142051342:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.335693359375	2	597.807382	1193.60021	0.81866	0.0004894	-4.483	-0.0026799	-3.6643	-0.0021905	597.8055448537003	16.47	0.27586	15.983	15.867	16.143	-0.48718					6	5	2	0	0	0	0.37624	1	146	146		60.118	12.461	1	88763	+		5959	24483	4131	4137	6765	6765					0.011155018486761037
EETPVVLQL	9	Unmodified	_EETPVVLQL_					0	0	0		ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.28759765625	2	514.28714	1026.55973	-0.050448	-2.5945E-05	-0.14695	-7.5575E-05	-0.1974	-0.00010152	514.2869386950687	81.093	0.93762	81.157	80.839	81.777	0.064384					49	21	4	0	0	0	0.049188	4	7972	7949;7972;7984;7998		108.09	13.247	1	381380			5960	7435	4132	4138	6766;6767;6768;6769	6767					0.04750903520562133
EETPVVLQL	9	Unmodified	_EETPVVLQL_					0	0	0		ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.2859497070312	2	514.28714	1026.55973	0.65671	0.00033774	-0.78168	-0.00040201	-0.12497	-6.4273E-05	514.2865472564384	81.168	0.93392	81.108	80.71	81.644	-0.059692					46	21	3	0	0	0	0.18601	2	8176	8163;8176		76.774	25.439	1	381200			5961	7435	4132	4138	6770;6771	6771					0.04750903520562133
EETPVVLQL	9	Unmodified	_EETPVVLQL_					0	0	0		ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.2864990234375	2	514.28714	1026.55973	0.17645	9.0748E-05	-0.50852	-0.00026152	-0.33206	-0.00017078	514.2867610962213	80.961	0.99719	81.017	80.6	81.597	0.055916					45	22	3	0	0	0	0.18601	3	8040	8029;8040;8050		76.774	10.345	1	361220			5962	7435	4132	4138	6772;6773;6774	6773					0.04750903520562133
EETPVVLQL	9	Unmodified	_EETPVVLQL_					0	0	0		ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	514.28714	1026.55973	0.23966	0.00012325	-0.33869	-0.00017418	-0.099028	-5.0929E-05	514.286796709377	80.471	0.79565	80.998	80.611	81.406	0.52677	-0.049161	0.00012852	NaN	108.09	33	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252550			5963	7435	4132	4138							0.04750903520562133
EETSNDMEYE	10	Unmodified	_EETSNDMEYE_					0	0	0		ENSG00000196169|ENST00000389916|KIF19;nc|ENSG00000196169|Q2TAC6-3|KIF19;ENST00000359939.10_1_17:72322488-72347101:+|nuORF;nc|ENSG00000196169|Q2TAC6-2|KIF19;ENST00000547389.1_1_17:72322488-72347101:+|nuORF	ENSG00000196169|ENST00000389916|KIF19	ENSG00000196169|ENST00000389916|KIF19	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.7218017578125	2	623.72444	1245.43433	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.52	1	112.55	112.05	113.05	0.030602								0	0	0	0.45132	1	13610	13610		18.262	1.7889	1				5964	8021	4133	4139	6775	6775					-0.17857221188614858
EEVEAKFKRY	10	Unmodified	_EEVEAKFKRY_					0	0	0		ENSG00000106554|ENST00000262570|CHCHD3	ENSG00000106554|ENST00000262570|CHCHD3	ENSG00000106554|ENST00000262570|CHCHD3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.8812255859375	3	433.562827	1297.66665	-0.32841	-0.00014238	0.76927	0.00033353	0.44086	0.00019114	433.56305996948583	32.475	0.66248	32.421	32.104	32.767	-0.05434					19	14	2	0	0	0	0.37624	1	1917	1917		42.864	15.817	1	71221			5965	2302	4134	4140	6776	6776					0.02972453734969349
EEVFVDGESFS	11	Unmodified	_EEVFVDGESFS_					0	0	0		ENSG00000135253|ENST00000610776|KCP;nc|ENSG00000135253|Q6ZWJ8-4|KCP;nc|ENSG00000135253|Q6ZWJ8|KCP	ENSG00000135253|ENST00000610776|KCP	ENSG00000135253|ENST00000610776|KCP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.5146484375	3	415.515431	1243.52446	-0.35929	-0.00014929	-1.9044	-0.00079131	-2.2637	-0.00094061	415.51454954729803	54.085	0.83603	54.67	54.333	55.169	0.58474					56	19	4	0	0	0	0.74022	1	5502	5502		24.232	5.9002	1	3043000			5966	3997	4135	4141	6777	6777					-0.08755803797885164
EEVFVDGESFS	11	Unmodified	_EEVFVDGESFS_					0	0	0		ENSG00000135253|ENST00000610776|KCP;nc|ENSG00000135253|Q6ZWJ8-4|KCP;nc|ENSG00000135253|Q6ZWJ8|KCP	ENSG00000135253|ENST00000610776|KCP	ENSG00000135253|ENST00000610776|KCP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	415.515431	1243.52446	1.1482	0.00047708	-3.3453	-0.00139	-2.1971	-0.00091294	415.51395326117097	54.314	0.79867	54.721	54.361	55.16	0.40663	0.025472	-0.00087298	NaN	24.232	56	18	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2933900			5967	3997	4135	4141							-0.08755803797885164
EEVGLLQL	8	Unmodified	_EEVGLLQL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1;nc|ENSG00000182871|P39060-1|COL18A1;nc|ENSG00000182871|P39060|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.75323486328125	2	450.755475	899.496398	0.5597	0.00025229	-3.4679	-0.0015632	-2.9082	-0.0013109	450.7538239580323	79.562	2.1146	79.701	78.151	80.265	0.13883					102	73	2	0	0	0	0.89962	1	7585	7585		38.806	3.1879	1	128600			5968	7477	4136	4142	6778	6778					0.04262962803340997
EEVGLLQL	8	Unmodified	_EEVGLLQL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1;nc|ENSG00000182871|P39060-1|COL18A1;nc|ENSG00000182871|P39060|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	450.755475	899.496398	-0.81894	-0.00036914	-2.0553	-0.00092646	-2.8743	-0.0012956	450.75452238257867	79.127	0.89253	79.538	79.014	79.907	0.4106	-0.22088	0.00076296	NaN	38.806	26	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63767			5969	7477	4136	4142							0.04262962803340997
EEVHDLERKY	10	Unmodified	_EEVHDLERKY_					0	0	0		nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000187109|P55209-2|NAP1L1;ENSG00000187109|ENST00000618691|NAP1L1;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;ENSG00000205531|ENST00000380542|NAP1L4;nc|ENSG00000205531|Q99733-2|NAP1L4	nc|ENSG00000187109|P55209-3|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	439.88604736328125	3	439.88597	1316.63608	0.053114	2.3364E-05	0.086758	3.8164E-05	0.13987	6.1528E-05	439.8859982422307	32.365	1.412	32.376	31.72	33.132	0.010902					125	37	5	0	0	0	0.22362	5	1804	1788;1796;1804;1815;1825		81.525	34.297	1	1046100			5970	7841	4137	4143	6779;6780;6781;6782;6783	6781					-0.009573246500849564
EEVHDLERKY	10	Unmodified	_EEVHDLERKY_					0	0	0		nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000187109|P55209-2|NAP1L1;ENSG00000187109|ENST00000618691|NAP1L1;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;ENSG00000205531|ENST00000380542|NAP1L4;nc|ENSG00000205531|Q99733-2|NAP1L4	nc|ENSG00000187109|P55209-3|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.8861999511719	3	439.88597	1316.63608	-0.32244	-0.00014184	0.4441	0.00019536	0.12167	5.352E-05	439.8861485081008	32.569	1.5036	32.515	32.104	33.608	-0.05434					106	35	5	0	0	0	0.21012	5	1912	1901;1912;1923;1934;1947		83.647	35.045	1	1366300			5971	7841	4137	4143	6784;6785;6786;6787;6788	6785					-0.009573246500849564
EEVHDLERKY	10	Unmodified	_EEVHDLERKY_					0	0	0		nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000187109|P55209-2|NAP1L1;ENSG00000187109|ENST00000618691|NAP1L1;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;ENSG00000205531|ENST00000380542|NAP1L4;nc|ENSG00000205531|Q99733-2|NAP1L4	nc|ENSG00000187109|P55209-3|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.8860778808594	3	439.88597	1316.63608	0.96207	0.0004232	-0.83262	-0.00036626	0.12946	5.6947E-05	439.8855790351752	32.361	2.0498	32.355	31.69	33.739	-0.0061455					130	48	5	0	0	0	0.21012	6	1824	1815;1824;1831;1842;1855;1866		83.647	36.419	1	1251000			5972	7841	4137	4143	6789;6790;6791;6792;6793;6794	6790					-0.009573246500849564
EEVHDLERKY	10	Unmodified	_EEVHDLERKY_					0	0	0		nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000187109|P55209-2|NAP1L1;ENSG00000187109|ENST00000618691|NAP1L1;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;ENSG00000205531|ENST00000380542|NAP1L4;nc|ENSG00000205531|Q99733-2|NAP1L4	nc|ENSG00000187109|P55209-3|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	439.88597	1316.63608	-1.5582	-0.00068541	5.0288	0.0022121	3.4706	0.0015267	440.22324293797936	32.407	0.1003	32.46	32.384	32.485	0.05246	0.033456	0.0062633	NaN	83.647	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23331			5973	7841	4137	4143							-0.009573246500849564
EEVIVLAP	8	Unmodified	_EEVIVLAP_					0	0	0		ENST00000546872.1_1_12:51888707-51890959:+|nuORF;nc|ENSG00000050438|Q2Y0W8-4|SLC4A8;nc|ENSG00000050438|Q2Y0W8-3|SLC4A8;ENST00000319957.10_1_12:51818771-51890959:+|nuORF;nc|ENSG00000050438|Q2Y0W8-2|SLC4A8	ENST00000546872.1_1_12:51888707-51890959:+|nuORF	ENST00000546872.1_1_12:51888707-51890959:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2531433105469	2	435.252569	868.490584	-0.32142	-0.0001399	-2.6219	-0.0011412	-2.9433	-0.0012811	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.82464	1	9388	9388		21.702	2.3424	1	2020200			5974	10024	4138	4144	6795	6795					0.0510786429166501
EEVKLIKKM	9	Unmodified	_EEVKLIKKM_					0	0	0		ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	559.3359375	2	559.33611	1116.65767	0.62839	0.00035148	-0.52536	-0.00029385	0.10303	5.7629E-05	559.3355410265135	31.357	0.71754	31.347	31.001	31.719	-0.010656					34	16	3	0	0	0	0.11055	1	1708	1708		90.37	33.649	1	100350			5975	1565	4139	4145	6796	6796					0.10400388844914232
EEVLEQIPGIA	11	Unmodified	_EEVLEQIPGIA_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.3214111328125	2	599.321711	1196.62887	0.61243	0.00036704	0.63613	0.00038125	1.2486	0.00074829	599.3219290455281	59.537	0.68394	59.505	59.226	59.91	-0.031731					40	16	3	0	0	0	0.41466	1	5582	5582		58.23	6.7022	1	331590			5976	7195	4140	4146	6797	6797					0.03841942749477312
EEVLIPDQKY	10	Unmodified	_EEVLIPDQKY_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	617.321533203125	2	617.321711	1232.62887	-0.31186	-0.00019252	1.0606	0.00065475	0.74876	0.00046223	617.3222602322675	56.797	0.39603	56.785	56.59	56.986	-0.012199					27	14	2	0	0	0	0.66675	2	5110	5110;5123		46.457	10.139	1	277380			5977	688	4141	4147	6798;6799	6798					0.021859427494746342
EEVLIPDQKY	10	Unmodified	_EEVLIPDQKY_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	617.322998046875	2	617.321711	1232.62887	-0.89385	-0.0005518	1.7371	0.0010724	0.84327	0.00052057	617.8244722055176	56.65	0.38211	56.683	56.581	56.963	0.033184					21	13	2	0	0	0	0.21012	1	5127	5127		83.647	34.205	1	313540			5978	688	4141	4147	6800	6800					0.021859427494746342
EEVLLLPAY	9	Unmodified	_EEVLLLPAY_					0	0	0			REV__nc|ENSG00000102001|O60840-4|CACNA1F	REV__nc|ENSG00000102001|O60840-4|CACNA1F	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7955932617188	2	523.792058	1045.56956	1.1929	0.00062481	2.3126	0.0012113	3.5055	0.0018361	523.7931742755334	19.706	1.4854	19.236	18.928	20.414	-0.46967					77	32	3	0	0	0	0.7932	1	645	645		26.796	0.10319	1	1002100	+		5979	17316	4142	4148	6801	6801					0.04860091525938515
EEVLNEFELK	10	Unmodified	_EEVLNEFELK_					0	0	0			REV__ENSG00000183098|ENST00000377047|GPC6	REV__ENSG00000183098|ENST00000377047|GPC6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.320556640625	2	625.319168	1248.62378	-0.61694	-0.00038578	2.1017	0.0013142	1.4848	0.00092846	625.3204345211741	64.692	1.0387	64.692	64.408	65.447	0					102	48	3	0	0	0	0.33399	1	5700	5700		69.628	13.194	1	308710	+		5980	22576	4143	4149	6802	6802					0.009416388868658032
EEVLNEFELK	10	Unmodified	_EEVLNEFELK_					0	0	0			REV__ENSG00000183098|ENST00000377047|GPC6	REV__ENSG00000183098|ENST00000377047|GPC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	625.3209228515625	2	625.319168	1248.62378	0.59733	0.00037352	0.83718	0.00052351	1.4345	0.00089703	625.3195366547585	64.365	0.91222	64.489	64.125	65.038	0.12397					75	31	3	0	0	0	0.44803	1	5674	5674		60.118	6.7668	1	317080	+		5981	22576	4143	4149	6803	6803					0.009416388868658032
EEVLNEFELK	10	Unmodified	_EEVLNEFELK_					0	0	0			REV__ENSG00000183098|ENST00000377047|GPC6	REV__ENSG00000183098|ENST00000377047|GPC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	625.31884765625	2	625.319168	1248.62378	-0.37651	-0.00023544	1.5445	0.00096579	1.168	0.00073035	625.3199036039578	64.522	1.0153	64.56	64.22	65.236	0.037849					73	33	3	0	0	0	0.44803	1	5716	5716		60.118	13.661	1	320220	+		5982	22576	4143	4149	6804	6804					0.009416388868658032
EEVPVESAADF	11	Unmodified	_EEVPVESAADF_					0	0	0			REV__nc|ENSG00000111602|Q9UNS1-2|TIMELESS	REV__nc|ENSG00000111602|Q9UNS1-2|TIMELESS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.7532958984375	2	596.772051	1191.52955	-0.45081	-0.00026903	-0.34533	-0.00020608	-0.79614	-0.00047511	596.771340577742	73.825	0.4572	74.212	73.956	74.413	0.38779					18	11	2	0	0	0	0.17226	1	8310	8310		42.864	0	1	328270	+		5983	17876	4144	4150	6805	6805					-0.05855499935296393
EEVVERANNTR	11	Unmodified	_EEVVERANNTR_					0	0	0		ENSG00000137124|ENST00000377698|ALDH1B1	ENSG00000137124|ENST00000377698|ALDH1B1	ENSG00000137124|ENST00000377698|ALDH1B1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.7391357421875	3	439.556623	1315.64804	0.43818	0.00019261	-1.6386	-0.00072025	-1.2004	-0.00052764	440.22385524469564	21.796	0.64709	21.352	21.069	21.716	-0.44324					32	14	3	0	0	0	0.17521	1	866	866		22.562	5.3948	1	123120			5984	4172	4145	4151	6806	6806					0.0028429209307887504
EEWCIEMAEM	10	Unmodified	_EEWCIEMAEM_					0	0	0		nc|ENSG00000090686|Q86UV5-7|USP48;nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-8|USP48	nc|ENSG00000090686|Q86UV5-7|USP48	nc|ENSG00000090686|Q86UV5-7|USP48	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	635.744873046875	2	635.743067	1269.47158	1.0211	0.00064916	1.7724	0.0011268	2.7935	0.001776	635.7441604867082	26.262	0.45121	26.291	26.136	26.587	0.02817					37	19	2	0	0	0	0.8608	1	991	991		34.173	13.335	1	104690			5985	1655	4146	4152	6807	6807					-0.15237544448223161
EEWLLLGW	8	Unmodified	_EEWLLLGW_					0	0	0			REV__ENST00000604157.1_1_4:153457578-153457731:+|nuORF	REV__ENST00000604157.1_1_4:153457578-153457731:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.2936401367188	2	523.271293	1044.52803	-0.042154	-2.2058E-05	-0.34486	-0.00018046	-0.38701	-0.00020251	523.2710639494485	75.927	1.4251	75.976	75.468	76.893	0.049194					76	45	3	0	0	0	0.4196	1	7359	7359		29.842	0	1	160150	+		5986	29354	4147	4153	6808	6808					0.007549555572950339
EEYQSLIRY	9	Unmodified	_EEYQSLIRY_					0	0	0		ENST00000463735.1_1_1:161123865-161127131:+|nuORF;ENST00000473766.5_1_1:161123787-161127484:+|nuORF;ENSG00000143222|ENST00000368003|UFC1	ENST00000463735.1_1_1:161123865-161127131:+|nuORF	ENST00000463735.1_1_1:161123865-161127131:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.3007202148438	2	600.798403	1199.58225	-0.53212	-0.0003197	-0.7357	-0.00044201	-1.2678	-0.00076171	600.798326714982	61.006	0.31325	60.994	60.79	61.103	-0.012203					15	12	2	0	0	0	0.44421	1	5665	5665		54.776	5.3348	1	79271			5987	4612	4148	4154	6809	6809					-0.00955497081804424
EEYQSLIRY	9	Unmodified	_EEYQSLIRY_					0	0	0		ENST00000463735.1_1_1:161123865-161127131:+|nuORF;ENST00000473766.5_1_1:161123787-161127484:+|nuORF;ENSG00000143222|ENST00000368003|UFC1	ENST00000463735.1_1_1:161123865-161127131:+|nuORF	ENST00000463735.1_1_1:161123865-161127131:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.3028564453125	2	600.798403	1199.58225	0.60419	0.000363	-1.1852	-0.00071206	-0.581	-0.00034906	600.7979960265909	60.898	0.33384	60.865	60.604	60.938	-0.032509					15	10	2	0	0	0	0.55097	1	5758	5758		49.442	10.189	1	107040			5988	4612	4148	4154	6810	6810					-0.00955497081804424
EEYQSLIRY	9	Unmodified	_EEYQSLIRY_					0	0	0		ENST00000463735.1_1_1:161123865-161127131:+|nuORF;ENST00000473766.5_1_1:161123787-161127484:+|nuORF;ENSG00000143222|ENST00000368003|UFC1	ENST00000463735.1_1_1:161123865-161127131:+|nuORF	ENST00000463735.1_1_1:161123865-161127131:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	600.7978515625	2	600.798403	1199.58225	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.758	1	60.789	60.289	61.289	0.0312								0	0	0	0.33576	1	5670	5670		45.972	1.5951	1				5989	4612	4148	4154	6811	6811					-0.00955497081804424
EEYRHVRRRRR	11	Unmodified	_EEYRHVRRRRR_					0	0	0			REV__ENSG00000112996|ENST00000507110|MRPS30	REV__ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3059692382812	3	538.304967	1611.89307	3.5626	0.0019178	-2.472	-0.0013307	1.0906	0.00058709	538.3036154864011	110.09	1.3352	110.06	109.77	111.11	-0.027641					122	44	4	0	0	0	0.81219	1	12200	12200		8.7993	5.3906	1	461650	+		5990	17974	4149	4155	6812	6812					0.11160055137224845
EEYRHVRRRRR	11	Unmodified	_EEYRHVRRRRR_					0	0	0			REV__ENSG00000112996|ENST00000507110|MRPS30	REV__ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.6400756835938	3	538.304967	1611.89307	-1.4902	-0.00080218	2.4601	0.0013243	0.96985	0.00052207	538.3061488564512	110.54	0.85041	110.54	110.07	110.92	-0.0074387					67	26	4	0	0	0	0.81219	1	11807	11807		8.7993	2.7983	1	283890	+		5991	17974	4149	4155	6813	6813					0.11160055137224845
EFAQHKLLPK	10	Unmodified	_EFAQHKLLPK_					0	0	0			REV__ENSG00000137877|ENST00000320955|SPTBN5	REV__ENSG00000137877|ENST00000320955|SPTBN5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.2347717285156	3	404.236274	1209.68699	0.32179	0.00013008	-2.9714	-0.0012012	-2.6496	-0.0010711	404.2349641058868	22.759	0.71555	22.148	21.823	22.539	-0.6107					45	17	4	0	0	0	0.78666	1	976	976		40.058	1.3441	1	300260	+		5992	19422	4150	4156	6814	6814					0.09053669185414037
EFARGFFNK	9	Unmodified	_EFARGFFNK_					0	0	0			REV__nc|ENSG00000093009|O75419-2|CDC45	REV__nc|ENSG00000093009|O75419-2|CDC45	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.28515625	2	558.285266	1114.55598	0.44639	0.00024921	-1.6162	-0.00090231	-1.1698	-0.0006531	558.2840615555907	75.271	0.56576	75.318	75.022	75.588	0.04644					35	15	3	0	0	0	0.74721	1	7321	7321		37.159	1.9584	1	94987	+		5993	17043	4151	4157	6815	6815					0.0032827853738126578
EFDAVLADF	9	Unmodified	_EFDAVLADF_					0	0	0		nc|ENSG00000102760|Q9H4X1-2|RGCC;ENSG00000102760|ENST00000379359|RGCC	nc|ENSG00000102760|Q9H4X1-2|RGCC	nc|ENSG00000102760|Q9H4X1-2|RGCC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7423706054688	2	513.742565	1025.47058	1.5547	0.00079874	-2.5144	-0.0012917	-0.95963	-0.000493	513.7411791854225	93.595	0.71108	94.036	93.691	94.402	0.441					41	18	5	0	0	0	0.10807	1	11155	11155		90.777	13.93	1	1190300			5994	2015	4152	4158	6816	6816					-0.0411393143897385
EFDAVLADF	9	Unmodified	_EFDAVLADF_					0	0	0		nc|ENSG00000102760|Q9H4X1-2|RGCC;ENSG00000102760|ENST00000379359|RGCC	nc|ENSG00000102760|Q9H4X1-2|RGCC	nc|ENSG00000102760|Q9H4X1-2|RGCC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7418212890625	2	513.742565	1025.47058	0.12314	6.3263E-05	-0.83602	-0.0004295	-0.71288	-0.00036624	513.7419489251383	93.773	0.646	94.208	93.807	94.453	0.43539					41	15	4	0	0	0	0.47272	1	11212	11212		53.351	0	1	1350700			5995	2015	4152	4158	6817	6817					-0.0411393143897385
EFFLSRRRRAR	11	Unmodified	_EFFLSRRRRAR_					0	0	0		ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.7369079589844	3	498.623525	1492.84875	-0.67498	-0.00033656	-0.26623	-0.00013275	-0.94121	-0.00046931	498.95743778086546	21.079	0.11578	21.015	20.968	21.084	-0.064058					5	4	2	0	0	0	0.18258	1	568	568		5.4129	0	1	8581.9			5996	7583	4153	4159	6818	6818					0.12203650991068571
EFFVLKNW	8	Unmodified	_EFFVLKNW_					0	0	0			REV__nc|ENSG00000087263|Q8N543-2|OGFOD1	REV__nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7868041992188	2	541.78711	1081.55967	0.62478	0.0003385	-4.0365	-0.0021869	-3.4117	-0.0018484	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.35733	1	5190	5190		83.287	0.98216	1	5802700	+		5997	16929	4154	4160	6819	6819					0.02214948311234366
EFGANCVCQFS	11	Unmodified	_EFGANCVCQFS_					0	0	0			REV__ENSG00000142449|ENST00000600128|FBN3	REV__ENSG00000142449|ENST00000600128|FBN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	602.7413940429688	2	602.741716	1203.46888	0.75911	0.00045755	-0.42721	-0.0002575	0.33191	0.00020005	602.7413209486597	84.845	1.0398	84.993	84.431	85.471	0.14824					51	23	3	0	0	0	0.51007	1	8274	8274		51.193	1.7511	1	387480	+		5998	19740	4155	4161	6820	6820					-0.12471631790867832
EFGRDPLDYID	11	Unmodified	_EFGRDPLDYID_					0	0	0			REV__ENSG00000135482|ENST00000257940|ZC3H10	REV__ENSG00000135482|ENST00000257940|ZC3H10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2597351074219	3	447.210342	1338.6092	1.3276	0.00059373	3.2521	0.0014544	4.5797	0.0020481	447.21167462558174	34.595	0.36239	34.977	34.811	35.173	0.3812					11	8	2	0	0	0	0.17289	1	2618	2618		41.08	15.188	1	47263	+		5999	19229	4156	4162	6821	6821					-0.04656433261288839
EFHLKRIAKP	10	Unmodified	_EFHLKRIAKP_					0	0	0			REV__ENSG00000173404|ENST00000310227|INSM1	REV__ENSG00000173404|ENST00000310227|INSM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8695678710938	2	619.87204	1237.72953	-0.18235	-0.00011304	-3.8434	-0.0023824	-4.0258	-0.0024955	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.8651	1	9811	9811		25.574	1.0549	1	2627900	+		6000	21920	4157	4163	6822	6822					0.1201706431365892
EFHRKHGRGGG	11	Unmodified	_EFHRKHGRGGG_					0	0	0		ENST00000463101.1_1_22:24582814-24583423:+|nuORF	ENST00000463101.1_1_22:24582814-24583423:+|nuORF	ENST00000463101.1_1_22:24582814-24583423:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.3212280273438	2	619.318494	1236.62244	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.225	1	58.209	57.709	58.709	-0.01643								0	0	0	0.56276	1	4949	4949		30.318	1.1477	1				6001	12058	4158	4164	6823	6823					0.013589071519618301
EFIIEKLKSA	10	Unmodified	_EFIIEKLKSA_					0	0	0		ENSG00000165325|ENST00000298050|DEUP1	ENSG00000165325|ENST00000298050|DEUP1	ENSG00000165325|ENST00000298050|DEUP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3441772460938	2	589.344989	1176.67542	0.82336	0.00048524	-4.2828	-0.002524	-3.4594	-0.0020388	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.86106	1	11540	11540		33.922	2.3918	1	9460500			6002	6073	4159	4165	6824	6824					0.09415427371436635
EFIVQYFHP	9	Unmodified	_EFIVQYFHP_					0	0	0			REV__ENSG00000196090|ENST00000373187|PTPRT	REV__ENSG00000196090|ENST00000373187|PTPRT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	591.2850952148438	2	590.295299	1178.57605	-2.1271	-0.0012556	-0.69364	-0.00040945	-2.8207	-0.001665	590.2949363589013	67.642	0.48975	67.672	67.426	67.916	0.030571					27	17	2	0	0	0	0.20789	1	6422	6422		29.15	0	1	79851	+		6003	23087	4160	4166	6825	6825					-0.006099705226688457
EFKKKVDLL	9	Unmodified	_EFKKKVDLL_					0	0	0			REV__ENSG00000137831|ENST00000322954|UACA	REV__ENSG00000137831|ENST00000322954|UACA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3406982421875	2	560.342249	1118.66995	-0.60038	-0.00033642	-2.9864	-0.0016734	-3.5868	-0.0020098	560.3405348095038	89.752	2.8802	89.752	87.726	90.606	0					163	66	4	0	0	0	0.74721	1	8716	8716		37.159	4.3467	1	504890	+		6004	19415	4161	4167	6826	6826					0.11535748579603933
EFKKKVDLL	9	Unmodified	_EFKKKVDLL_					0	0	0			REV__ENSG00000137831|ENST00000322954|UACA	REV__ENSG00000137831|ENST00000322954|UACA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3403930664062	2	560.342249	1118.66995	-1.4184	-0.00079481	-2.1655	-0.0012134	-3.584	-0.0020082	560.3409019697357	89.331	3.0544	89.504	87.698	90.752	0.17234					137	71	4	0	0	0	0.76764	1	8857	8857		34.173	3.6689	1	613340	+		6005	19415	4161	4167	6827	6827					0.11535748579603933
EFLDAEGR	8	Unmodified	_EFLDAEGR_					0	0	0		nc|ENSG00000182013|Q86V59-2|PNMA8A;ENSG00000182013|ENST00000313683|PNMA8A	nc|ENSG00000182013|Q86V59-2|PNMA8A	nc|ENSG00000182013|Q86V59-2|PNMA8A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.72174072265625	2	468.724707	935.43486	0.4939	0.0002315	-3.488	-0.0016349	-2.9941	-0.0014034	468.72287741489856	69.82	0.72598	69.949	69.77	70.496	0.1291					62	36	2	0	0	0	0.87064	1	6365	6365		29.15	1.2673	1	1036600			6006	7418	4162	4168	6828	6828					-0.03543968895939997
EFLDQNVVF	9	Unmodified	_EFLDQNVVF_					0	0	0		nc|ENSG00000197653|Q8IVF4|DNAH10;ENSG00000197653|ENST00000673944|DNAH10;nc|ENSG00000197653|Q8IVF4-2|DNAH10	nc|ENSG00000197653|Q8IVF4|DNAH10	nc|ENSG00000197653|Q8IVF4|DNAH10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.777099609375	2	555.776939	1109.53933	-0.16725	-9.2954E-05	0.14425	8.0172E-05	-0.022999	-1.2783E-05	555.776990924581	78.04	1.0719	78.604	78.007	79.079	0.56332					56	25	4	0	0	0	0.64922	1	8882	8882		44.117	1.2525	1	858780			6007	8187	4163	4169	6829	6829					-0.01106267139243755
EFLDVIYWFRQ	11	Unmodified	_EFLDVIYWFRQ_					0	0	0		nc|ENSG00000118707|Q9GZN2-2|TGIF2;ENST00000491113.1_1_20:35234354-35236222:+|nuORF;nc|ENSG00000101084|Q9BUV8-4|RAB5IF;nc|ENSG00000101084|Q9BUV8-3|RAB5IF;ENSG00000101084|ENST00000344795|RAB5IF;nc|ENSG00000101084|Q9BUV8|RAB5IF;nc|ENSG00000101084|Q9BUV8-5|RAB5IF	nc|ENSG00000118707|Q9GZN2-2|TGIF2	nc|ENSG00000118707|Q9GZN2-2|TGIF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8050842285156	3	505.925877	1514.7558	0.34769	0.00017591	-2.3108	-0.0011691	-1.9632	-0.00099321	506.2591164965153	36.845	0.57392	37.127	36.724	37.297	0.28173					18	13	2	0	0	0	0.17925	1	2861	2861		15.337	0	1	98319			6008	14867	4164	4170	6830	6830					0.019012886944437923
EFLKIGGLLDS	11	Unmodified	_EFLKIGGLLDS_					0	0	0			REV__ENST00000318789.8_1_3:71006977-71007181:-|nuORF	REV__ENST00000318789.8_1_3:71006977-71007181:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.332763671875	2	596.334621	1190.65469	0.85589	0.0005104	-3.7538	-0.0022385	-2.8979	-0.0017281	596.3322598839247	96.043	3.1049	96.206	95.311	98.416	0.16316					228	72	4	0	0	0	0.72106	1	9956	9956		28.081	0.19925	1	1469100	+		6009	24979	4165	4171	6831	6831					0.06698836991768076
EFLLEEGNF	9	Unmodified	_EFLLEEGNF_					0	0	0			REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.262451171875	2	549.261122	1096.50769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.101	1	57.656	57.156	58.156	0.55512								0	0	0	0.36353	1	5938	5938		49.442	5.0644	1		+		6010	19119	4166	4172	6832	6832					-0.03670259893192451
EFLNPFQSP	9	Unmodified	_EFLNPFQSP_					0	0	0		ENST00000392133.7_1_2:217070291-217070480:+|nuORF	ENST00000392133.7_1_2:217070291-217070480:+|nuORF	ENST00000392133.7_1_2:217070291-217070480:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.7634887695312	2	539.763832	1077.51311	0.74596	0.00040264	-0.87433	-0.00047193	-0.12837	-6.929E-05	539.7632456702203	81.825	0.61378	81.883	81.636	82.25	0.057808					27	13	3	0	0	0	0.73802	1	8169	8169		37.812	1.3648	1	128900			6011	11013	4167	4173	6833	6833					-0.022545363107155936
EFLRSQVDLIE	11	Unmodified	_EFLRSQVDLIE_					0	0	0			REV__nc|ENSG00000135407|O75366-2|AVIL	REV__nc|ENSG00000135407|O75366-2|AVIL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.57550048828125	3	450.241753	1347.70343	0.15078	6.7888E-05	-2.603	-0.001172	-2.4522	-0.0011041	450.24047292869494	30.625	0.39192	30.628	30.448	30.84	0.0037212					15	8	2	0	0	0	0.61907	1	2032	2032		42.243	4.6427	1	242410	+		6012	19217	4168	4174	6834	6834					0.04348705560846611
EFLRSQVDLIE	11	Unmodified	_EFLRSQVDLIE_					0	0	0			REV__nc|ENSG00000135407|O75366-2|AVIL	REV__nc|ENSG00000135407|O75366-2|AVIL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	450.241753	1347.70343	0.18442	8.3031E-05	-2.6335	-0.0011857	-2.4491	-0.0011027	450.240451957946	30.639	0.63607	30.664	30.414	31.05	0.025013	0.049006	-0.0009065	NaN	42.243	32	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40068	+		6013	19217	4168	4174							0.04348705560846611
EFLRSQVDLIE	11	Unmodified	_EFLRSQVDLIE_					0	0	0			REV__nc|ENSG00000135407|O75366-2|AVIL	REV__nc|ENSG00000135407|O75366-2|AVIL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	450.241753	1347.70343	-0.30015	-0.00013514	-2.0797	-0.00093636	-2.3798	-0.0010715	450.2406190888326	30.668	0.99456	30.621	29.916	30.911	-0.047064	0.005713	-0.00015838	NaN	42.243	50	24	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51526	+		6014	19217	4168	4174							0.04348705560846611
EFLRSQVDLIE	11	Unmodified	_EFLRSQVDLIE_					0	0	0			REV__nc|ENSG00000135407|O75366-2|AVIL	REV__nc|ENSG00000135407|O75366-2|AVIL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	450.241753	1347.70343	0.76342	0.00034372	-3.127	-0.0014079	-2.3636	-0.0010642	450.24013504348096	30.665	0.5959	30.654	30.405	31.001	-0.010656	0.03923	-0.001573	NaN	42.243	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56579	+		6015	19217	4168	4174							0.04348705560846611
EFLRSQVDLIE	11	Unmodified	_EFLRSQVDLIE_					0	0	0			REV__nc|ENSG00000135407|O75366-2|AVIL	REV__nc|ENSG00000135407|O75366-2|AVIL	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	450.241753	1347.70343	-1.3674	-0.00061564	-0.88004	-0.00039623	-2.2474	-0.0010119	450.2412056323409	30.644	0.33444	30.707	30.591	30.925	0.063122	0.092177	0.001462	NaN	42.243	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56404	+		6016	19217	4168	4174							0.04348705560846611
EFLRSQVDLIE	11	Unmodified	_EFLRSQVDLIE_					0	0	0			REV__nc|ENSG00000135407|O75366-2|AVIL	REV__nc|ENSG00000135407|O75366-2|AVIL	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	450.241753	1347.70343	0.11878	5.348E-05	-2.4719	-0.001113	-2.3532	-0.0010595	450.5749561190749	30.356	0.49318	30.468	30.206	30.699	0.11225	-0.14671	-0.00068822	NaN	42.243	30	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57920	+		6017	19217	4168	4174							0.04348705560846611
EFLRSQVDLIE	11	Unmodified	_EFLRSQVDLIE_					0	0	0			REV__nc|ENSG00000135407|O75366-2|AVIL	REV__nc|ENSG00000135407|O75366-2|AVIL	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	450.241753	1347.70343	0.26865	0.00012096	-1.231	-0.00055425	-0.96235	-0.00043329	450.2412854312778	30.588	0.41318	30.585	30.29	30.703	-0.0022526	-0.029712	0.00098796	NaN	42.243	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77852	+		6018	19217	4168	4174							0.04348705560846611
EFLRSQVDLIE	11	Unmodified	_EFLRSQVDLIE_					0	0	0			REV__nc|ENSG00000135407|O75366-2|AVIL	REV__nc|ENSG00000135407|O75366-2|AVIL	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	450.241753	1347.70343	-1.8028	-0.00081169	-0.416	-0.0001873	-2.2188	-0.00099899	450.2414037709843	30.564	0.70809	30.592	30.318	31.026	0.028618	-0.022965	0.0020888	NaN	42.243	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211790	+		6019	19217	4168	4174							0.04348705560846611
EFLRSQVDLIE	11	Unmodified	_EFLRSQVDLIE_					0	0	0			REV__nc|ENSG00000135407|O75366-2|AVIL	REV__nc|ENSG00000135407|O75366-2|AVIL	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	450.241753	1347.70343	0.15078	6.7888E-05	-2.603	-0.001172	-2.4522	-0.0011041	450.24047292869494	30.625	0.39192	30.628	30.448	30.84	0.0037212	0.013262	-0.00086523	NaN	42.243	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	242410	+		6020	19217	4168	4174							0.04348705560846611
EFLTRRRK	8	Unmodified	_EFLTRRRK_					0	0	0			REV__ENSG00000134899|ENST00000652225|ERCC5	REV__ENSG00000134899|ENST00000652225|ERCC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.332275390625	2	553.333082	1104.65161	-0.75754	-0.00041917	-0.44783	-0.0002478	-1.2054	-0.00066697	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.87064	1	10321	10321		29.15	5.6269	1	4355400	+		6021	19175	4169	4175	6835	6835					0.10347051448275124
EFLVRSVLT	9	Unmodified	_EFLVRSVLT_					0	0	0			REV__ENSG00000016391|ENST00000315251|CHDH	REV__ENSG00000016391|ENST00000315251|CHDH	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3069458007812	2	532.310949	1062.60735	0.015671	8.3418E-06	-0.072404	-3.8542E-05	-0.056734	-3.02E-05	532.3108043818899	34.717	0.66647	34.713	34.376	35.043	-0.0047417					28	17	2	0	0	0	0.20789	1	2109	2109		40.573	8.6178	1	105100	+		6022	16214	4170	4176	6836	6836					0.07854602511406483
EFLVRSVLT	9	Unmodified	_EFLVRSVLT_					0	0	0			REV__ENSG00000016391|ENST00000315251|CHDH	REV__ENSG00000016391|ENST00000315251|CHDH	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	532.310949	1062.60735	-0.30981	-0.00016491	0.050604	2.6937E-05	-0.2592	-0.00013798	532.3108519400364	34.628	0.71779	34.635	34.339	35.057	0.0063934	-0.047741	0.0001918	NaN	40.573	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124040	+		6023	16214	4170	4176							0.07854602511406483
EFMTIEKLA	9	Unmodified	_EFMTIEKLA_					0	0	0			REV__ENST00000519719.1_1_5:162930404-162939341:+|nuORF	REV__ENST00000519719.1_1_5:162930404-162939341:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.2855224609375	2	541.283543	1080.55253	0.95607	0.00051751	2.471	0.0013375	3.427	0.001855	541.2847282396424	20.535	0.58039	20.465	20.183	20.763	-0.070011					63	26	3	0	0	0	0.58151	1	514	514		47.916	3.5384	1	207610	+		6024	28086	4171	4177	6837	6837					0.015478476485213832
EFNLSESK	8	Unmodified	_EFNLSESK_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	477.2317810058594	2	477.232364	952.450176	-0.2587	-0.00012346	0.35851	0.00017109	0.099808	4.7632E-05	477.232447667366	27.666	0.52666	27.627	27.305	27.832	-0.038523					29	12	3	0	0	0	0.89494	1	1326	1326		37.159	0	1	76144			6025	3805	4172	4178	6838	6838					-0.027951020987529773
EFPEAKNAPLK	11	Unmodified	_EFPEAKNAPLK_					0	0	0		nc|ENSG00000125675|P42263|GRIA3;ENSG00000125675|ENST00000620443|GRIA3	nc|ENSG00000125675|P42263|GRIA3	nc|ENSG00000125675|P42263|GRIA3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3369140625	2	622.337695	1242.66084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.92	1	110.95	110.45	111.45	0.031738								0	0	0	0.56276	1	12154	12154		25.574	1.0549	1				6026	3404	4173	4179	6839	6839					0.0492135522326862
EFPHLRPVL	9	Unmodified	_EFPHLRPVL_					0	0	0		nc|ENSG00000176510|Q8NH08|OR10AC1	nc|ENSG00000176510|Q8NH08|OR10AC1	nc|ENSG00000176510|Q8NH08|OR10AC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.2747192382812	2	554.319109	1106.62366	0.0090705	5.028E-06	-1.7594	-0.00097525	-1.7503	-0.00097022	554.3183252848906	76.106	0.58305	76.501	76.196	76.779	0.39507					24	13	3	0	0	0	0.20789	1	8598	8598		17.365	0	1	271390			6027	15113	4174	4180	6840	6840					0.07461728468183537
EFPHLRPVL	9	Unmodified	_EFPHLRPVL_					0	0	0		nc|ENSG00000176510|Q8NH08|OR10AC1	nc|ENSG00000176510|Q8NH08|OR10AC1	nc|ENSG00000176510|Q8NH08|OR10AC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.2742309570312	2	554.319109	1106.62366	-0.16075	-8.9109E-05	1.016	0.00056321	0.85528	0.0004741	554.3186126772774	76.008	0.78665	76.576	76.142	76.929	0.56836					30	18	3	0	0	0	0.20789	1	8608	8608		24.203	1.1603	1	347550			6028	15113	4174	4180	6841	6841					0.07461728468183537
EFQKMRRDL	9	Unmodified	_EFQKMRRDL_					0	0	0		ENSG00000264424|ENST00000255381|MYH4;ENSG00000006788|ENST00000252172|MYH13;ENSG00000125414|ENST00000245503|MYH2;ENSG00000109061|ENST00000226207|MYH1;ENSG00000197616|ENST00000405093|MYH6;ENSG00000092054|ENST00000355349|MYH7	ENSG00000264424|ENST00000255381|MYH4;ENSG00000125414|ENST00000245503|MYH2;ENSG00000109061|ENST00000226207|MYH1;ENSG00000197616|ENST00000405093|MYH6	ENSG00000264424|ENST00000255381|MYH4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.22479248046875	3	408.216885	1221.62883	0.54479	0.00022239	2.3979	0.00097887	2.9427	0.0012013	408.21692839625916	38.437	0.36238	38.779	38.618	38.98	0.34187					16	8	3	0	0	0	0.20789	1	3153	3153		19.104	0	1	54667			6029	8943;2445;8183;3389	4175	4181	6842	6842					0.026876642685010665
EFQPFLKKW	9	Unmodified	_EFQPFLKKW_					0	0	0		ENSG00000115267|ENST00000649979|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.8582153320312	2	611.834591	1221.65463	-0.40125	-0.0002455	2.1853	0.0013371	1.7841	0.0010916	611.8359435210261	98.278	1.5662	98.335	97.674	99.24	0.056831					54	35	2	0	0	0	0.20789	1	10331	10331		17.365	5.729	1	54400			6030	2827	4176	4182	6843	6843					0.052668817824269354
EFQRQQVQQER	11	Unmodified	_EFQRQQVQQER_					0	0	0		ENST00000465304.5_1_3:122313378-122329447:+|nuORF	ENST00000465304.5_1_3:122313378-122329447:+|nuORF	ENST00000465304.5_1_3:122313378-122329447:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.5823974609375	3	492.583173	1474.72769	-0.23933	-0.00011789	-2.4982	-0.0012306	-2.7375	-0.0013485	492.58192512611373	25.162	0.66678	25.121	24.844	25.511	-0.04117					39	17	3	0	0	0	0.73277	1	1060	1060		25.892	2.5138	1	133120			6031	12109	4177	4183	6844	6844					0.009313587670931156
EFRDLLEV	8	Unmodified	_EFRDLLEV_					0	0	0		ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.80352783203125	2	510.771657	1019.52876	-0.36222	-0.00018501	0.95769	0.00048916	0.59547	0.00030415	510.7715745983097	87.67	0.25903	87.871	87.714	87.973	0.20114					6	5	2	0	0	0	0.4196	1	8650	8650		23.042	0	1	20672			6032	6230	4178	4184	6845	6845					0.019777502063448082
EFRDSANVVL	10	Unmodified	_EFRDSANVVL_					0	0	0			REV__nc|ENSG00000069018|Q9HCX4-2|TRPC7	REV__nc|ENSG00000069018|Q9HCX4-2|TRPC7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.2979736328125	2	575.29857	1148.58259	-0.88704	-0.00051031	-1.4347	-0.00082539	-2.3217	-0.0013357	575.2975755059318	42.721	0.6556	42.684	42.359	43.014	-0.036293					34	15	3	0	0	0	0.86471	1	3286	3286		30.318	1.1682	1	183420	+		6033	16573	4179	4185	6846	6846					0.014239226380595937
EFRERPPR	8	Unmodified	_EFRERPPR_					0	0	0			REV__ENST00000598846.1_1_1:1636463-1654047:-|nuORF	REV__ENST00000598846.1_1_1:1636463-1654047:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.7954711914062	2	543.793789	1085.57303	0.4756	0.00025863	3.1634	0.0017203	3.639	0.0019789	543.795425902486	28.837	0.74174	28.664	28.365	29.107	-0.17336					38	16	3	0	0	0	0.93786	1	1774	1774		53.351	2.016	1	417870	+		6034	16128	4180	4186	6847	6847					0.03366199143169979
EFRGRDRNVL	10	Unmodified	_EFRGRDRNVL_					0	0	0			REV__ENSG00000118503|ENST00000612899|TNFAIP3	REV__ENSG00000118503|ENST00000612899|TNFAIP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2312927246094	3	421.230182	1260.66872	-1.0077	-0.00042446	4.1194	0.0017352	3.1117	0.0013108	421.23184113292746	42.657	0.61056	43.091	42.725	43.336	0.4334					35	14	3	0	0	0	0.86587	1	3825	3825		27.644	0	1	917350	+		6035	18317	4181	4187	6848	6848					0.048809272634116496
EFRHLLKRL	9	Unmodified	_EFRHLLKRL_					0	0	0			REV__ENSG00000109452|ENST00000262992|INPP4B	REV__ENSG00000109452|ENST00000262992|INPP4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.3697509765625	2	606.372207	1210.72986	-1.2685	-0.00076921	-3.1415	-0.0019049	-4.41	-0.0026741	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.76255	1	9618	9618		35.618	5.3006	1	823240	+		6036	17758	4182	4188	6849	6849					0.13292484033513574
EFRRRKTRE	9	Unmodified	_EFRRRKTRE_					0	0	0		nc|ENSG00000197705|Q9P2G3-2|KLHL14	nc|ENSG00000197705|Q9P2G3-2|KLHL14	nc|ENSG00000197705|Q9P2G3-2|KLHL14	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3056640625	2	639.362902	1276.71125	0.020383	1.3032E-05	-0.32268	-0.00020631	-0.3023	-0.00019328	639.3626705294643	111.16	0.41321	111.16	110.92	111.33	0					22	13	3	0	0	0	0.20789	1	11569	11569		14.137	0	1	19028			6037	15196	4183	4189	6850	6850					0.08396322391672584
EFSPRSVIH	9	Unmodified	_EFSPRSVIH_					0	0	0		ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2525024414062	2	536.282723	1070.55089	-0.11195	-6.0037E-05	0.9426	0.0005055	0.83065	0.00044546	536.2829632884334	31.069	0.60458	31.073	30.84	31.444	0.0037193					21	13	3	0	0	0	0.20789	1	2090	2090		71.296	13.484	1	94057			6038	1231	4184	4190	6851	6851					0.01843974674761739
EFWIRLRKHNV	11	Unmodified	_EFWIRLRKHNV_					0	0	0		nc|ENSG00000180113|O60522-2|TDRD6;ENSG00000180113|ENST00000316081|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	499.9520568847656	3	499.95276	1496.83645	0.15329	7.6639E-05	-2.397	-0.0011984	-2.2437	-0.0011217	499.9517618165755	28.747	0.61972	28.859	28.573	29.192	0.11225					50	32	2	0	0	0	0.78683	1	1194	1194		14.086	0	1	123050			6039	7314	4185	4191	6852	6852					0.10790614528013975
EFWIRLRKHNV	11	Unmodified	_EFWIRLRKHNV_					0	0	0		nc|ENSG00000180113|O60522-2|TDRD6;ENSG00000180113|ENST00000316081|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	499.95276	1496.83645	-0.63086	-0.0003154	-1.5348	-0.00076732	-2.1656	-0.0010827	499.9521459304931	29.074	0.4721	29.143	29.041	29.513	0.06868	0.044166	0.0010173	NaN	14.086	30	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63216			6040	7314	4185	4191							0.10790614528013975
EFWIRLRKHNV	11	Unmodified	_EFWIRLRKHNV_					0	0	0		nc|ENSG00000180113|O60522-2|TDRD6;ENSG00000180113|ENST00000316081|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	499.95276	1496.83645	0.48798	0.00024397	-2.4595	-0.0012296	-1.9715	-0.00098567	499.9514159553052	28.852	0.72558	28.874	28.59	29.316	0.021948	-0.22462	-0.00036971	NaN	14.086	50	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104810			6041	7314	4185	4191							0.10790614528013975
EFWIRLRKHNV	11	Unmodified	_EFWIRLRKHNV_					0	0	0		nc|ENSG00000180113|O60522-2|TDRD6;ENSG00000180113|ENST00000316081|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	499.95276	1496.83645	-1.4219	-0.00071086	-1.4067	-0.00070326	-2.8285	-0.0014141	499.95202768336026	29.256	0.38913	29.227	29.084	29.473	-0.029207	0.12843	0.0012094	NaN	14.086	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41962			6042	7314	4185	4191							0.10790614528013975
EFWIRLRKHNV	11	Unmodified	_EFWIRLRKHNV_					0	0	0		nc|ENSG00000180113|O60522-2|TDRD6;ENSG00000180113|ENST00000316081|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	499.95276	1496.83645	0.57575	0.00028785	-2.9928	-0.0014963	-2.417	-0.0012084	500.28599253535293	29.48	0.64234	29.391	29.191	29.833	-0.089546	0.29197	-0.0011696	NaN	14.086	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61781			6043	7314	4185	4191							0.10790614528013975
EFYERVSGAR	10	Unmodified	_EFYERVSGAR_					0	0	0		ENST00000483804.5_1_1:161179060-161183980:+|nuORF;nc|ENSG00000158864|O75306-2|NDUFS2;ENSG00000158864|ENST00000676972|NDUFS2;ENST00000478866.5_1_1:161172175-161179984:+|nuORF	ENST00000483804.5_1_1:161179060-161183980:+|nuORF	ENST00000483804.5_1_1:161179060-161183980:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	607.3013305664062	2	607.301644	1212.58874	-0.45493	-0.00027628	1.015	0.00061641	0.56007	0.00034013	607.3020290185127	58.773	0.91653	59.166	58.693	59.61	0.39209					43	21	3	0	0	0	0.49268	1	6158	6158		56.434	9.977	1	572780			6044	5502	4186	4192	6853	6853					-0.009055591304331756
EGAGIVLKYI	10	Unmodified	_EGAGIVLKYI_					0	0	0		ENSG00000135476|ENST00000257934|ESPL1;nc|ENSG00000135476|Q14674-2|ESPL1	ENSG00000135476|ENST00000257934|ESPL1	ENSG00000135476|ENST00000257934|ESPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8172607421875	2	531.813325	1061.6121	3.2614	0.0017345	3.9718	0.0021123	7.2332	0.0038467	531.8152553069001	101.24	0.81892	101.19	100.8	101.62	-0.049828					49	19	4	0	0	0	0.86763	1	11009	11009		26.693	1.2427	1	580610			6045	4028	4187	4193	6854	6854					0.08375486654176711
EGAMDSVLHT	10	Unmodified	_EGAMDSVLHT_					0	0	0		ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2421875	2	530.242406	1058.47026	-0.051973	-2.7558E-05	-2.7047	-0.0014342	-2.7567	-0.0014617	530.2409509004085	110.26	1.5296	110.38	110.11	111.63	0.11658					90	54	2	0	0	0	0.86589	1	11986	11986		29.15	3.5755	1	270990			6046	7971	4188	4194	6855	6855					-0.05663674430456922
EGAMDSVLHT	10	Unmodified	_EGAMDSVLHT_					0	0	0		ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2410888671875	2	530.242406	1058.47026	-0.050418	-2.6734E-05	-2.572	-0.0013638	-2.6225	-0.0013905	530.2408868740829	111.88	0.31017	111.99	111.92	112.23	0.11118					19	10	2	0	0	0	0.85694	1	12066	12066		21.96	1.013	1	24573			6047	7971	4188	4194	6856	6856					-0.05663674430456922
EGAYRCVVAE	10	Unmodified	_EGAYRCVVAE_					0	0	0		ENSG00000134256|ENST00000682167|CD101	ENSG00000134256|ENST00000682167|CD101	ENSG00000134256|ENST00000682167|CD101	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.7551879882812	2	548.758223	1095.50189	0.1326	7.2765E-05	-2.7851	-0.0015283	-2.6525	-0.0014556	548.7566408137145	51.642	0.51817	51.676	51.511	52.029	0.034588					27	16	2	0	0	0	0.70553	1	4132	4132		44.377	1.981	1	120810			6048	3921	4189	4195	6857	6857					-0.042036816764948526
EGDPGQIFHP	10	Unmodified	_EGDPGQIFHP_					0	0	0		ENST00000367884.6_1_1:165600502-165604990:+|nuORF	ENST00000367884.6_1_1:165600502-165604990:+|nuORF	ENST00000367884.6_1_1:165600502-165604990:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.7575073242188	2	548.756538	1095.49852	-0.0022886	-1.2559E-06	0.10642	5.84E-05	0.10413	5.7144E-05	548.7564308720259	51.636	0.74102	51.613	51.238	51.979	-0.02343					29	17	2	0	0	0	0.64457	1	4528	4528		47.657	0	1	125100			6049	10572	4190	4196	6858	6858					-0.04540608458864881
EGDPKVFQK	9	Unmodified	_EGDPKVFQK_					0	0	0			REV__ENSG00000135205|ENST00000285871|CCDC146	REV__ENSG00000135205|ENST00000285871|CCDC146	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2766723632812	2	524.277106	1046.53966	0.77594	0.00040681	-1.2066	-0.0006326	-0.43068	-0.00022579	524.2765116769002	25.659	3.3591	25.402	24.41	27.769	-0.25721					213	75	6	0	0	0	0.48102	1	1249	1249		52.937	4.9772	1	20447000	+		6050	19198	4191	4197	6859	6859					0.01825152580613576
EGEEFSLEE	9	Unmodified	_EGEEFSLEE_					0	0	0		nc|ENSG00000158290|Q13620|CUL4B;ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620-3|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.3049926757812	2	534.722027	1067.4295	0.64317	0.00034392	-3.7897	-0.0020265	-3.1466	-0.0016825	534.7197528465678	51.023	0.65688	51.775	51.491	52.147	0.75174					30	15	3	0	0	0	0.20789	1	5092	5092		20.947	1.8434	1	607620			6051	5469	4192	4198	6860	6860					-0.10151737269075056
EGEPQRAVRSK	11	Unmodified	_EGEPQRAVRSK_					0	0	0			REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.7184143066406	3	419.561709	1255.6633	-1.8637	-0.00078195	3.1393	0.0013171	1.2756	0.00053519	419.89697796226085	43.731	0.74763	43.739	43.434	44.182	0.0084534					25	17	2	0	0	0	0.17536	1	3028	3028		25.892	4.8595	1	396670	+		6052	19079	4193	4199	6861	6861					0.04569203680944156
EGEQHEKA	8	Unmodified	_EGEQHEKA_					0	0	0		nc|ENSG00000104863|Q9HAP6-2|LIN7B;ENST00000474252.1_1_19:49618516-49621276:+|nuORF;ENSG00000104863|ENST00000221459|LIN7B;ENST00000469137.5_1_19:49617849-49621627:+|nuORF	nc|ENSG00000104863|Q9HAP6-2|LIN7B	nc|ENSG00000104863|Q9HAP6-2|LIN7B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2128601074219	2	464.211963	926.409374	0.13197	6.126E-05	-0.14935	-6.9328E-05	-0.01738	-8.0682E-06	464.2117411861402	24.022	0.5108	23.641	23.327	23.837	-0.38178					15	11	2	0	0	0	0.90837	1	1124	1124		56.721	7.2795	1	114270			6053	2157	4194	4200	6862	6862					-0.05677443418369421
EGEQHEKA	8	Unmodified	_EGEQHEKA_					0	0	0		nc|ENSG00000104863|Q9HAP6-2|LIN7B;ENST00000474252.1_1_19:49618516-49621276:+|nuORF;ENSG00000104863|ENST00000221459|LIN7B;ENST00000469137.5_1_19:49617849-49621627:+|nuORF	nc|ENSG00000104863|Q9HAP6-2|LIN7B	nc|ENSG00000104863|Q9HAP6-2|LIN7B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	464.211963	926.409374	1.1935	0.00055404	-1.3322	-0.00061844	-0.13874	-6.4404E-05	464.21123927762824	23.956	0.50774	23.382	23.178	23.685	-0.57415	-0.12934	-0.00074233	NaN	56.721	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78229			6054	2157	4194	4200							-0.05677443418369421
EGEQTASAGLR	11	Unmodified	_EGEQTASAGLR_					0	0	0			REV__ENST00000608517.1_1_1:178694567-178695308:-|nuORF	REV__ENST00000608517.1_1_1:178694567-178695308:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.8243408203125	2	559.775459	1117.53637	0.2179	0.00012197	-4.4147	-0.0024712	-4.1968	-0.0023493	559.7728038493294	81.946	0.19404	82.373	82.236	82.43	0.42646					7	4	2	0	0	0	0.17574	1	9445	9445		49.536	1.8787	1	84885	+		6055	29398	4195	4201	6863	6863					-0.017701422640584497
EGGEMSPQ	8	Unmodified	_EGGEMSPQ_					0	0	0		ENSG00000149262|ENST00000534064|INTS4	ENSG00000149262|ENST00000534064|INTS4	ENSG00000149262|ENST00000534064|INTS4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.2290954589844	2	417.668543	833.322533	2.7886	0.0011647	-0.4331	-0.00018089	2.3555	0.00098382	417.66822146579767	26.705	1.6182	26.677	25.725	27.343	-0.027706					58	41	2	0	0	0	0.4196	1	1225	1225		7.1934	0	1	88698			6056	5011	4196	4202	6864	6864					-0.10079565964440462
EGGFEFTTL	9	Unmodified	_EGGFEFTTL_					0	0	0			REV__ENST00000491746.5_1_15:42134104-42137535:+|nuORF	REV__ENST00000491746.5_1_15:42134104-42137535:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7322692871094	2	500.73474	999.454927	0.33553	0.00016801	-4.4858	-0.0022462	-4.1503	-0.0020782	500.7323481055169	30.848	0.7394	30.852	30.491	31.23	0.0037212					40	16	3	0	0	0	0.28875	1	2045	2045		65.803	7.9919	1	820900	+		6057	27661	4197	4203	6865	6865					-0.044822179560014774
EGGGPEPGPAN	11	Unmodified	_EGGGPEPGPAN_					0	0	0		nc|ENSG00000166313|O00213-2|APBB1;ENSG00000166313|ENST00000609360|APBB1	nc|ENSG00000166313|O00213-2|APBB1	nc|ENSG00000166313|O00213-2|APBB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2159729003906	2	491.217246	980.419939	0.43716	0.00021474	-0.40408	-0.00019849	0.033075	1.6247E-05	491.21692699349103	29.205	1.3236	29.032	28.51	29.833	-0.17336					63	30	3	0	0	0	0.48313	1	1870	1870		53.089	8.7118	1	332230			6058	6175	4198	4204	6866	6866					-0.07105460763943938
EGGGSAAG	8	Unmodified	_EGGGSAAG_					0	0	0		ENSG00000167447|ENST00000300917|SMG8;nc|ENSG00000167447|Q8ND04-2|SMG8;nc|ENSG00000167447|Q8ND04-3|SMG8;ENST00000580498.5_1_17:57287412-57290261:+|nuORF	ENSG00000167447|ENST00000300917|SMG8	ENSG00000167447|ENST00000300917|SMG8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8593139648438	1	605.252545	604.245269	0.032574	1.9715E-05	3.6443	0.0022057	3.6769	0.0022255	605.2545582880796	80.118	1.3411	80.644	80.105	81.446	0.52676					48	31	2	0	0	0	0.4196	1	9206	9206		12.959	0	1	333300			6059	6292	4199	4205	6867	6867					-0.07268416118472487
EGGHTWTN	8	Unmodified	_EGGHTWTN_					0	0	0			REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|129|2|sense	REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|129|2|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9432067871094	2	451.193574	900.372594	-0.42832	-0.00019326	-0.083203	-3.7541E-05	-0.51152	-0.0002308	451.1939858135648	55.82	1.8999	55.792	54.241	56.141	-0.027279					77	55	3	0	0	0	0.4196	1	5057	5057		17.365	0	1	175130	+		6060	29546	4200	4206	6868	6868					-0.08157695244290153
EGGKVPIKW	9	Unmodified	_EGGKVPIKW_					0	0	0		ENSG00000146648|ENST00000275493|EGFR	ENSG00000146648|ENST00000275493|EGFR	ENSG00000146648|ENST00000275493|EGFR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	507.29254150390625	2	507.292559	1012.57057	0.47773	0.00024235	-4.2702	-0.0021662	-3.7925	-0.0019239	507.290260767579	29.824	0.49604	29.836	29.625	30.121	0.01123					31	24	2	0	0	0	0.77244	1	1276	1276		32.812	2.3088	1	63524			6061	4854	4201	4207	6869	6869					0.06478350685506484
EGGLRQSTL	9	Unmodified	_EGGLRQSTL_					0	0	0			REV__ENST00000380817.7_1_22:50884833-50884944:-|nuORF	REV__ENST00000380817.7_1_22:50884833-50884944:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.76123046875	2	480.759081	959.503609	2.0148	0.00096864	2.3651	0.0011371	4.3799	0.0021057	480.7600911618307	25.68	1.7408	25.249	24.627	26.368	-0.4311					91	39	4	0	0	0	0.30689	1	1334	1334		64.207	3.2353	1	2778300	+		6062	25955	4202	4208	6870	6870					0.022236954037680334
EGGPRRCNDCR	11	Unmodified	_EGGPRRCNDCR_					0	0	0			REV__ENSG00000115414|ENST00000354785|FN1	REV__ENSG00000115414|ENST00000354785|FN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.7035217285156	3	421.52075	1261.54042	-0.76432	-0.00032218	0.64509	0.00027192	-0.11923	-5.0256E-05	421.5208608177257	35.326	1.2202	35.27	34.889	36.109	-0.056381					37	27	2	0	0	0	0.17432	1	2377	2377		21.032	0	1	49058	+		6063	18116	4203	4209	6871	6871					-0.07988699313659708
EGGPWPGSAR	10	Unmodified	_EGGPWPGSAR_					0	0	0			REV__ENST00000330714.7_1_21:42751998-42754376:+|nuORF	REV__ENST00000330714.7_1_21:42751998-42754376:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8179016113281	2	507.243598	1012.47264	-0.88208	-0.00044743	-2.0345	-0.001032	-2.9166	-0.0014794	507.242125636296	60.715	0.31887	61.105	60.937	61.256	0.38945					10	8	2	0	0	0	0.37624	1	6469	6469		67.494	0	1	107460	+		6064	25114	4204	4210	6872	6872					-0.03309457910472702
EGGRFCSFSPC	11	Unmodified	_EGGRFCSFSPC_					0	0	0		ENSG00000166166|ENST00000389749|TRMT61A	ENSG00000166166|ENST00000389749|TRMT61A	ENSG00000166166|ENST00000389749|TRMT61A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	595.2420654296875	2	595.241883	1188.46921	-0.77427	-0.00046088	1.5292	0.00091025	0.75494	0.00044937	595.2425877787755	64.821	0.56484	64.821	64.585	65.15	0					52	23	3	0	0	0	0.64498	1	5701	5701		39.253	7.723	1	217320			6065	6164	4205	4211	6873	6873					-0.11748212071006492
EGGVLTEPSL	10	Unmodified	_EGGVLTEPSL_					0	0	0			REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000172915|Q8NFP9|NBEA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.7325134277344	2	501.261122	1000.50769	-1.3969	-0.00070019	-4.3766	-0.0021938	-5.7735	-0.002894	501.25940355744103	30.956	0.30941	31.036	30.856	31.165	0.079834					9	6	2	0	0	0	0.37624	1	2061	2061		37.812	8.6415	1	35910	+		6066	21863	4206	4212	6874	6874					0.007457401068108993
EGHARACYL	9	Unmodified	_EGHARACYL_					0	0	0			REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.2391662597656	2	510.240001	1018.46545	0.02879	1.469E-05	-0.11047	-5.6367E-05	-0.081681	-4.1677E-05	510.2397797540504	36.463	0.98129	36.445	36.151	37.132	-0.018673					41	21	3	0	0	0	0.35373	2	2333	2322;2333		60.972	5.4797	1	201220	+		6067	20713	4207	4213	6875;6876	6876					-0.043045137825629354
EGHARACYL	9	Unmodified	_EGHARACYL_					0	0	0			REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.2373962402344	2	510.240001	1018.46545	-0.60685	-0.00030964	0.59827	0.00030526	-0.0085743	-4.375E-06	510.2399579683379	36.416	1.0739	36.36	36.018	37.091	-0.055702					44	23	3	0	0	0	0.35373	1	2413	2413		60.972	20.399	1	212660	+		6068	20713	4207	4213	6877	6877					-0.043045137825629354
EGHARACYL	9	Unmodified	_EGHARACYL_					0	0	0			REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.2384948730469	2	510.240001	1018.46545	-1.5428	-0.0007872	1.615	0.00082403	0.072176	3.6827E-05	510.24046775552324	36.363	0.98667	36.372	36.073	37.06	0.0092812					44	21	3	0	0	0	0.28163	1	2344	2344		66.429	25.857	1	181910	+		6069	20713	4207	4213	6878	6878					-0.043045137825629354
EGHARACYL	9	Unmodified	_EGHARACYL_					0	0	0			REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.24029541015625	2	510.240001	1018.46545	-0.4652	-0.00023736	0.26247	0.00013392	-0.20273	-0.00010344	510.239998618418	36.411	0.68477	36.434	36.145	36.83	0.023624					33	19	2	0	0	0	0.72402	1	2007	2007		38.806	0	1	95252	+		6070	20713	4207	4213	6879	6879					-0.043045137825629354
EGHARACYL	9	Unmodified	_EGHARACYL_					0	0	0			REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	510.240001	1018.46545	0.25586	0.00013055	-0.75101	-0.0003832	-0.49515	-0.00025265	510.2395069472448	36.277	0.59363	36.217	35.934	36.528	-0.060333	-0.14932	-0.0010398	NaN	66.429	31	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136960	+		6071	20713	4207	4213							-0.043045137825629354
EGHAVRFGF	9	Unmodified	_EGHAVRFGF_					0	0	0		ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.2373962402344	2	510.256508	1018.49846	-0.57928	-0.00029558	-4.3924	-0.0022413	-4.9717	-0.0025368	510.25397343803206	36.347	0.36131	36.291	36.017	36.379	-0.055901					10	7	2	0	0	0	0.20789	1	2413	2413		55.504	9.5523	1	19126			6072	3668	4208	4214	6880	6880					-0.010045636681866199
EGHTRWRQ	8	Unmodified	_EGHTRWRQ_					0	0	0		nc|ENSG00000099869|Q6U949|IGF2-AS	nc|ENSG00000099869|Q6U949|IGF2-AS	nc|ENSG00000099869|Q6U949|IGF2-AS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2684326171875	2	535.267939	1068.52132	2.3766	0.0012721	-2.1029	-0.0011256	0.27371	0.00014651	535.2667942353804	25.666	0.80199	25.235	24.895	25.697	-0.4311					44	18	4	0	0	0	0.9295	2	1341	1341;1352		55.504	2.1528	1	495420			6073	14805	4209	4215	6881;6882	6881					-0.010195445507406475
EGIKRVKN	8	Unmodified	_EGIKRVKN_					0	0	0			REV__nc|ENSG00000160710|P55265-5|ADAR	REV__nc|ENSG00000160710|P55265-5|ADAR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2874450683594	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.87922	1	10447	10447		31.955	1.4512	1	48574000	+		6074	20733	4210	4216	6883	6883					0.0874858239999412
EGITAPCIF	9	Carbamidomethyl (C)	_EGITAPC(Carbamidomethyl (C))IF_	EGITAPC(1)IF		EGITAPC(82)IF		0	1	0			REV__nc|ENSG00000010803|Q96GD3-5|SCMH1	REV__nc|ENSG00000010803|Q96GD3-5|SCMH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.2450866699219	2	504.24696	1006.47937	-0.32793	-0.00016536	-4.1687	-0.002102	-4.4966	-0.0022674	504.24460815385413	32.492	0.85933	32.618	32.116	32.975	0.12643					32	19	3	0	0	0	0.15928	1	2273	2273		82.305	9.4258	1	281840	+		6075	16172	4211	4217	6884	6884	217				-0.02361281074126964
EGKAQLLTE	9	Unmodified	_EGKAQLLTE_					0	0	0			REV__nc|ENSG00000111679|P29350-2|PTPN6	REV__nc|ENSG00000111679|P29350-2|PTPN6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.76776123046875	2	494.769114	987.523675	-1.0804	-0.00053455	-1.2985	-0.00064247	-2.3789	-0.001177	494.76831235713274	38.716	0.71983	39.238	38.994	39.714	0.52235					52	16	4	0	0	0	0.76255	1	3207	3207		35.618	1.4457	1	759320	+		6076	17887	4212	4218	6885	6885					0.02941446343709231
EGKKPIRF	8	Unmodified	_EGKKPIRF_					0	0	0			REV__ENSG00000077684|ENST00000226319|JADE1	REV__ENSG00000077684|ENST00000226319|JADE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79034423828125	2	487.792727	973.5709	-1.4694	-0.00071678	-3.0475	-0.0014866	-4.5169	-0.0022033	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.89043	1	8116	8116		35.618	2.1027	1	607090	+		6077	16752	4213	4219	6886	6886					0.08305770405377189
EGKPESET	8	Unmodified	_EGKPESET_					0	0	0			REV__nc|ENSG00000181722|Q9HC78-2|ZBTB20	REV__nc|ENSG00000181722|Q9HC78-2|ZBTB20	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.7033996582031	2	438.700897	875.387241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.806	1	26.768	26.268	27.268	-0.038523								0	0	0	0.29403	1	1237	1237		32.812	0.85756	1		+		6078	22475	4214	4220	6887	6887					-0.05543667886797721
EGKQVMADSGP	11	Unmodified	_EGKQVMADSGP_					0	0	0		ENST00000488355.1_1_6:169617703-169623454:-|nuORF;ENSG00000186340|ENST00000617924|THBS2	ENST00000488355.1_1_6:169617703-169623454:-|nuORF	ENST00000488355.1_1_6:169617703-169623454:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	559.7607421875	2	559.760963	1117.50737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.858	1	50.834	50.334	51.334	-0.02343								0	0	0	0.56276	1	4423	4423		23.523	1.5628	1				6079	7792	4215	4221	6888	6888					-0.0466800288468221
EGLHHQRP	8	Unmodified	_EGLHHQRP_					0	0	0		ENSG00000115232|ENST00000397033|ITGA4	ENSG00000115232|ENST00000397033|ITGA4	ENSG00000115232|ENST00000397033|ITGA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.25372314453125	2	487.251757	972.488962	0.64569	0.00031461	3.6005	0.0017544	4.2462	0.002069	487.25338430429883	28.873	0.79298	28.699	28.399	29.192	-0.17336					52	18	4	0	0	0	0.92973	1	1790	1790		50.025	5.9077	1	1461400			6080	2821	4216	4222	6889	6889					0.001616680462802833
EGLTVALIL	9	Unmodified	_EGLTVALIL_					0	0	0			REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7913513183594	2	464.789318	927.564084	-1.14	-0.00052988	4.1432	0.0019257	3.0031	0.0013958	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.76996	1	1724	1724		33.516	3.0119	1	286820	+		6081	23179	4217	4223	6890	6890					0.09740412734140591
EGLVLLALV	9	Unmodified	_EGLVLLALV_					0	0	0			REV__ENST00000515518.6_1_5:109760554-109978041:-|nuORF	REV__ENST00000515518.6_1_5:109760554-109978041:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8012390136719	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.76996	1	3734	3734		33.516	6.7195	1	1294000	+		6082	22892	4218	4224	6891	6891					0.119050031137931
EGMQKQFFLF	10	Oxidation (M)	_EGM(Oxidation (M))QKQFFLF_		EGM(1)QKQFFLF		EGM(57)QKQFFLF	0	0	1			REV__MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|20|2|sense	REV__MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|20|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	645.8115844726562	2	645.812999	1289.61144	-0.43238	-0.00027924	-0.83476	-0.0005391	-1.2671	-0.00081834	645.8124429375736	26.156	0.49569	26.118	25.89	26.386	-0.038523					26	10	3	0	0	0	0.4892	1	1166	1166		56.721	13.857	1	95559	+		6083	29644	4219	4225	6892	6892		433			-0.021776760571810883
EGNGQLFILG	10	Unmodified	_EGNGQLFILG_					0	0	0			REV__ENST00000583478.1_1_17:61514659-61514908:-|nuORF	REV__ENST00000583478.1_1_17:61514659-61514908:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2779541015625	2	524.277106	1046.53966	2.7827	0.0014589	-3.2687	-0.0017137	-0.48603	-0.00025482	524.2754281662812	25.682	3.5829	25.251	24.138	27.721	-0.4311					230	81	7	0	0	0	0.80179	1	1486	1486		39.253	0.23134	1	23207000	+		6084	29073	4220	4226	6893	6893					0.01825152580613576
EGNHTVYRI	9	Unmodified	_EGNHTVYRI_					0	0	0		nc|ENSG00000108669|Q15438-3|CYTH1;nc|ENSG00000108669|Q15438-2|CYTH1;ENSG00000108669|ENST00000446868|CYTH1	nc|ENSG00000108669|Q15438-3|CYTH1	nc|ENSG00000108669|Q15438-3|CYTH1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.7766723632812	2	544.777805	1087.54106	-1.5482	-0.00084342	-2.3335	-0.0012712	-3.8817	-0.0021146	544.7764407455116	29.996	0.41564	29.996	29.793	30.208	0					18	11	2	0	0	0	0.77244	1	1337	1337		32.812	2.3088	1	45034			6085	2424	4221	4227	6894	6894					0.0007878666935994261
EGNHTVYRI	9	Unmodified	_EGNHTVYRI_					0	0	0		nc|ENSG00000108669|Q15438-3|CYTH1;nc|ENSG00000108669|Q15438-2|CYTH1;ENSG00000108669|ENST00000446868|CYTH1	nc|ENSG00000108669|Q15438-3|CYTH1	nc|ENSG00000108669|Q15438-3|CYTH1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	544.777805	1087.54106	0.058888	3.2081E-05	-3.4588	-0.0018843	-3.3999	-0.0018522	544.7759727833921	29.906	0.40195	29.931	29.733	30.135	0.025013	0.0034505	0.0001255	NaN	32.812	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29532			6086	2424	4221	4227							0.0007878666935994261
EGNHTVYRI	9	Unmodified	_EGNHTVYRI_					0	0	0		nc|ENSG00000108669|Q15438-3|CYTH1;nc|ENSG00000108669|Q15438-2|CYTH1;ENSG00000108669|ENST00000446868|CYTH1	nc|ENSG00000108669|Q15438-3|CYTH1	nc|ENSG00000108669|Q15438-3|CYTH1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	544.777805	1087.54106	0.51037	0.00027804	-4.0132	-0.0021863	-3.5028	-0.0019082	544.7755415858969	29.911	0.64371	29.868	29.634	30.278	-0.043095	-0.059312	-0.00047854	NaN	32.812	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36455			6087	2424	4221	4227							0.0007878666935994261
EGNKDRLAL	9	Unmodified	_EGNKDRLAL_					0	0	0		ENST00000590776.1_1_17:40539205-40539454:-|nuORF	ENST00000590776.1_1_17:40539205-40539454:-|nuORF	ENST00000590776.1_1_17:40539205-40539454:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.27978515625	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.78058	1	8665	8665		30.504	0.18592	1	1814000			6088	14264	4222	4228	6895	6895					0.03911670812135526
EGNSLGPELH	10	Unmodified	_EGNSLGPELH_					0	0	0		ENSG00000121270|ENST00000356608|ABCC11;nc|ENSG00000121270|Q96J66-2|ABCC11;ENST00000567385.5_1_16:48244807-48265838:-|nuORF	ENSG00000121270|ENST00000356608|ABCC11	ENSG00000121270|ENST00000356608|ABCC11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.635498046875	2	526.753995	1051.49344	-0.63588	-0.00033495	-1.6123	-0.00084927	-2.2481	-0.0011842	526.7533353255805	38.454	0.30959	38.404	38.243	38.553	-0.050369					9	6	2	0	0	0	0.37624	1	2698	2698		36.447	9.6506	1	19801			6089	3171	4223	4229	6896	6896					-0.030249123214616702
EGNSLGPELH	10	Unmodified	_EGNSLGPELH_					0	0	0		ENSG00000121270|ENST00000356608|ABCC11;nc|ENSG00000121270|Q96J66-2|ABCC11;ENST00000567385.5_1_16:48244807-48265838:-|nuORF	ENSG00000121270|ENST00000356608|ABCC11	ENSG00000121270|ENST00000356608|ABCC11	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	526.753995	1051.49344	0.26529	0.00013974	0.10771	5.6737E-05	0.373	0.00019648	526.7540784718408	38.283	0.43998	38.377	38.154	38.594	0.094322	-0.013457	0.00071454	NaN	36.447	18	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53914			6090	3171	4223	4229							-0.030249123214616702
EGPALVKV	8	Unmodified	_EGPALVKV_					0	0	0			REV__ENSG00000138756|ENST00000502613|BMP2K	REV__ENSG00000138756|ENST00000502613|BMP2K	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25726318359375	2	406.747453	811.480354	-0.68646	-0.00027922	4.4056	0.001792	3.7192	0.0015128	406.7492563060952	53.2	2.2249	53.138	51.977	54.202	-0.062065					97	62	2	0	0	0	0.4196	1	4470	4470		38.806	22.333	1	136170	+		6091	19501	4224	4230	6897	6897					0.06707301357084816
EGPCIKAR	8	Unmodified	_EGPCIKAR_					0	0	0			REV__ENSG00000122512|ENST00000265849|PMS2	REV__ENSG00000122512|ENST00000265849|PMS2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2674865722656	2	437.234187	872.453822	-1.6896	-0.00073875	-0.91787	-0.00040132	-2.6075	-0.0011401	437.2336320768223	53.226	0.77798	53.226	52.797	53.575	0					36	22	2	0	0	0	0.4196	1	4391	4391		27.882	10.517	1	112020	+		6092	18501	4225	4231	6898	6898					0.012492891941178641
EGPDFTGIY	9	Unmodified	_EGPDFTGIY_					0	0	0			REV__nc|ENSG00000013392|Q9UIY3-2|RWDD2A	REV__nc|ENSG00000013392|Q9UIY3-2|RWDD2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	499.72857666015625	2	499.726915	997.439277	-0.45613	-0.00022794	3.937	0.0019674	3.4809	0.0017395	499.7286925165346	73.379	0.46216	73.337	72.952	73.414	-0.042015					34	20	2	0	0	0	0.62081	1	7169	7169		45.952	7.1458	1	268650	+		6093	16196	4226	4232	6899	6899					-0.059545044730498375
EGPGRILRK	9	Unmodified	_EGPGRILRK_					0	0	0			REV__ENSG00000247596|ENST00000305533|TWF2	REV__ENSG00000247596|ENST00000305533|TWF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3174438476562	2	513.314358	1024.61416	0.017852	9.1639E-06	4.224	0.0021683	4.2419	0.0021774	513.3163616040292	43.268	1.3862	43.218	42.749	44.135	-0.050312					74	33	3	0	0	0	0.78983	1	2952	2952		27.882	1.1893	1	383900	+		6094	23857	4227	4233	6900	6900					0.10283960182664487
EGPKGGQGHT	10	Unmodified	_EGPKGGQGHT_					0	0	0		ENST00000358164.9_1_16:30515497-30516720:+|nuORF	ENST00000358164.9_1_16:30515497-30516720:+|nuORF	ENST00000358164.9_1_16:30515497-30516720:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	484.2332458496094	2	484.23323	966.451907	-1.9791	-0.00095833	2.1887	0.0010598	0.2096	0.0001015	484.2341495051641	22.231	1.0021	22.231	21.894	22.896	0					108	46	3	0	0	0	0.63899	1	644	644		47.96	1.9873	1	364900			6095	10405	4228	4234	6901	6901					-0.032660482901405885
EGPKKLSA	8	Unmodified	_EGPKKLSA_					0	0	0			REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.2442321777344	2	415.242535	828.470518	4.5254	0.0018791	0.48844	0.00020282	5.0138	0.0020819	415.2428634068345	107.07	0.82995	107.22	106.81	107.64	0.14929					51	28	3	0	0	0	0.81184	1	13121	13121		19.997	0.6368	1	2111700	+		6096	28458	4229	4235	6902	6902					0.04942113351705757
EGPLDVRLRKL	11	Unmodified	_EGPLDVRLRKL_					0	0	0		ENST00000496479.5_1_3:37095344-37107514:-|nuORF;nc|ENSG00000093167|Q9Y608-2|LRRFIP2;nc|ENSG00000093167|Q9Y608-4|LRRFIP2;nc|ENSG00000093167|Q9Y608-5|LRRFIP2;ENSG00000093167|ENST00000336686|LRRFIP2	ENST00000496479.5_1_3:37095344-37107514:-|nuORF	ENST00000496479.5_1_3:37095344-37107514:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3924560546875	2	648.393336	1294.77212	1.8787	0.0012181	-2.6701	-0.0017313	-0.7914	-0.00051314	648.3914694260502	106.27	0.88895	106.3	105.79	106.67	0.03688					67	20	4	0	0	0	0.6493	1	11652	11652		38.754	2.3069	1	16251000			6097	1710	4230	4236	6903	6903					0.13652414651210165
EGPLDVRLRKL	11	Unmodified	_EGPLDVRLRKL_					0	0	0		ENST00000496479.5_1_3:37095344-37107514:-|nuORF;nc|ENSG00000093167|Q9Y608-2|LRRFIP2;nc|ENSG00000093167|Q9Y608-4|LRRFIP2;nc|ENSG00000093167|Q9Y608-5|LRRFIP2;ENSG00000093167|ENST00000336686|LRRFIP2	ENST00000496479.5_1_3:37095344-37107514:-|nuORF	ENST00000496479.5_1_3:37095344-37107514:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.392578125	2	648.393336	1294.77212	-1.1413	-0.00074	0.13726	8.8996E-05	-1.004	-0.000651	648.3933115061765	106.13	0.94215	106.19	105.71	106.65	0.053757					81	22	4	0	0	0	0.6493	1	11306	11306		38.754	1.2454	1	40329000			6098	1710	4230	4236	6904	6904					0.13652414651210165
EGPLPLSLIL	10	Unmodified	_EGPLPLSLIL_					0	0	0			REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.324462890625	2	526.323525	1050.6325	-0.53497	-0.00028157	2.7776	0.0014619	2.2427	0.0011804	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.64457	1	5071	5071		47.657	10.498	1	220370	+		6099	26764	4231	4237	6905	6905					0.10920657314022719
EGPLPLSLIL	10	Unmodified	_EGPLPLSLIL_					0	0	0			REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.8265380859375	2	526.323525	1050.6325	-0.67072	-0.00035302	3.1177	0.0016409	2.447	0.0012879	526.3250687277414	64.714	3.1276	64.752	62.47	65.598	0.037849					207	130	2	0	0	0	0.86763	1	5536	5536		26.693	4.733	1	198930	+		6100	26764	4231	4237	6906	6906					0.10920657314022719
EGPLPLSLIL	10	Unmodified	_EGPLPLSLIL_					0	0	0			REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3275146484375	2	526.323525	1050.6325	-1.1167	-0.00058772	3.5242	0.0018549	2.4076	0.0012672	526.3252520860087	76.123	0.86795	76.213	75.973	76.841	0.089363					54	30	2	0	0	0	0.85251	1	7123	7123		19.997	6.2214	1	85783	+		6101	26764	4231	4237	6907	6907					0.10920657314022719
EGPLPLSLIL	10	Unmodified	_EGPLPLSLIL_					0	0	0			REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3251342773438	2	526.323525	1050.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.025	1	55.988	55.488	56.488	-0.036827								0	0	0	0.45132	1	4721	4721		19.997	2.6318	1		+		6102	26764	4231	4237	6908	6908					0.10920657314022719
EGPPAFVE	8	Unmodified	_EGPPAFVE_					0	0	0			REV__ENSG00000112232|ENST00000281156|KHDRBS2	REV__ENSG00000112232|ENST00000281156|KHDRBS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.8982849121094	2	423.205618	844.396684	0.89074	0.00037696	1.0786	0.00045649	1.9694	0.00083346	423.20637926052495	28.796	0.25583	28.623	28.547	28.803	-0.17336					7	5	2	0	0	0	0.4196	1	1799	1799		15.642	4.1308	1	34687	+		6103	17928	4232	4238	6909	6909					-0.031738548106091
EGPSSCSMPS	10	Unmodified	_EGPSSCSMPS_					0	0	0			REV__ENST00000254322.2_1_19:14626237-14626324:-|nuORF	REV__ENST00000254322.2_1_19:14626237-14626324:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.1860046386719	2	491.186242	980.357932	-0.16814	-8.2586E-05	-1.4334	-0.00070408	-1.6016	-0.00078667	491.18544321590446	64.613	1.5883	64.579	63.461	65.049	-0.034256					90	46	2	0	0	0	0.8608	1	6218	6218		34.173	2.2177	1	131650	+		6104	24309	4233	4239	6910	6910					-0.13303271498932645
EGPSVILILA	10	Unmodified	_EGPSVILILA_					0	0	0			REV__ENST00000531819.5_1_1:52251300-52251633:+|nuORF	REV__ENST00000531819.5_1_1:52251300-52251633:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3082580566406	2	506.307875	1010.6012	-1.5415	-0.00078047	2.7011	0.0013676	1.1596	0.00058712	506.3093285794098	44.216	2.5192	44.216	43.58	46.099	0					89	61	3	0	0	0	0.86452	1	3163	3163		30.504	0	1	527690	+		6105	28312	4234	4240	6911	6911					0.09632084279928677
EGPSVILILA	10	Unmodified	_EGPSVILILA_					0	0	0			REV__ENST00000531819.5_1_1:52251300-52251633:+|nuORF	REV__ENST00000531819.5_1_1:52251300-52251633:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3082275390625	2	506.307875	1010.6012	-0.11528	-5.8369E-05	2.3887	0.0012094	2.2734	0.001151	506.30895339856204	46.446	1.9227	46.367	45.268	47.19	-0.079002					66	54	2	0	0	0	0.85466	1	3346	3346		20.947	1.587	1	167080	+		6106	28312	4234	4240	6912	6912					0.09632084279928677
EGPSVILILA	10	Unmodified	_EGPSVILILA_					0	0	0			REV__ENST00000531819.5_1_1:52251300-52251633:+|nuORF	REV__ENST00000531819.5_1_1:52251300-52251633:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.310302734375	2	506.307875	1010.6012	-0.4302	-0.00021782	2.8218	0.0014287	2.3916	0.0012109	506.3092413243001	54.85	1.3019	54.801	54.615	55.917	-0.049271					56	42	2	0	0	0	0.85694	1	4556	4556		21.96	0	1	188390	+		6107	28312	4234	4240	6913	6913					0.09632084279928677
EGPTVIVLLA	10	Unmodified	_EGPTVIVLLA_					0	0	0			REV__ENSG00000204922|ENST00000377953|UQCC3	REV__ENSG00000204922|ENST00000377953|UQCC3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3078308105469	2	506.307875	1010.6012	-1.5415	-0.00078047	2.7011	0.0013676	1.1596	0.00058712	506.3093285794098	44.216	2.5192	44.216	43.58	46.099	0					89	61	3	0	0	0	0.85934	2	3210	3186;3210		35.618	5.1146	1	527690	+		6108	23527	4235	4241	6914;6915	6915					0.09632084279905939
EGPTVIVLLA	10	Unmodified	_EGPTVIVLLA_					0	0	0			REV__ENSG00000204922|ENST00000377953|UQCC3	REV__ENSG00000204922|ENST00000377953|UQCC3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.3093566894531	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.679	1	46.665	46.165	47.165	-0.013821								0	0	0	0.45132	1	3757	3757		40.778	1.5253	1		+		6109	23527	4235	4241	6916	6916					0.09632084279905939
EGPVLTLGL	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))EGPVLTLGL_					1	0	0		nc|ENSG00000135902|Q07001-2|CHRND;ENSG00000135902|ENST00000258385|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76885986328125	2	470.771126	939.527698	-1.6002	-0.00075333	-2.9239	-0.0013765	-4.5241	-0.0021298	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.64922	1	4420	4420		44.117	6.9577	1	1490800			6110	4060	4236	4242	6917	6917					0.0555153583743504
EGPVLTLGL	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))EGPVLTLGL_					1	0	0		nc|ENSG00000135902|Q07001-2|CHRND;ENSG00000135902|ENST00000258385|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7691650390625	2	470.771126	939.527698	-1.0221	-0.00048115	-3.257	-0.0015333	-4.2791	-0.0020145	470.76946116999153	50.688	1.1627	50.718	50.343	51.506	0.029629					82	35	3	0	0	0	0.62081	1	3975	3975		45.952	7.1458	1	1717600			6111	4060	4236	4242	6918	6918					0.0555153583743504
EGQAALEK	8	Unmodified	_EGQAALEK_					0	0	0			REV__nc|ENSG00000115252|P54750-8|PDE1A	REV__nc|ENSG00000115252|P54750-8|PDE1A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.8982849121094	2	423.2218	844.429047	0.89239	0.00037768	-4.1587	-0.0017601	-3.2663	-0.0013824	423.2157689858064	28.887	0.21496	28.713	28.588	28.803	-0.17336					8	4	3	0	0	0	0.4196	1	1799	1799		14.137	0	1	20933	+		6112	18098	4237	4243	6919	6919					0.0006093259237331949
EGQFGKEGKAG	11	Unmodified	_EGQFGKEGKAG_					0	0	0			REV__nc|ENSG00000197467|Q5TAT6-11|COL13A1	REV__nc|ENSG00000197467|Q5TAT6-11|COL13A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.78125	2	554.275095	1106.53564	-0.31344	-0.00017373	3.265	0.0018097	2.9516	0.001636	554.2772058796023	63.977	1.4864	64.004	63.353	64.839	0.027138					74	46	3	0	0	0	0.52654	1	6035	6035		50.034	0.59196	1	282550	+		6113	23234	4238	4244	6920	6920					-0.013369369130941777
EGQHTKQW	8	Unmodified	_EGQHTKQW_					0	0	0			REV__nc|ENSG00000053747|Q16787-3|LAMA3	REV__nc|ENSG00000053747|Q16787-3|LAMA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.81768798828125	2	507.243598	1012.47264	0.39861	0.00020219	-2.6671	-0.0013528	-2.2684	-0.0011507	507.74354863580487	60.65	0.33043	61.203	60.965	61.296	0.55323					15	8	2	0	0	0	0.4196	1	6459	6459		55.504	21.332	1	158950	+		6114	16391	4239	4245	6921	6921					-0.033094579104840705
EGQKPSFLF	9	Unmodified	_EGQKPSFLF_					0	0	0		ENST00000374212.4_1_9:116024351-116024450:+|nuORF	ENST00000374212.4_1_9:116024351-116024450:+|nuORF	ENST00000374212.4_1_9:116024351-116024450:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.778564453125	2	526.7742	1051.53385	-0.3205	-0.00016883	3.5605	0.0018756	3.24	0.0017068	526.7763607898962	48.485	0.32611	48.954	48.748	49.074	0.46941					11	7	2	0	0	0	0.20789	1	4657	4657		24.203	1.1603	1	143690			6115	10768	4240	4246	6922	6922					0.010140540689462796
EGQLAAVVR	9	Unmodified	_EGQLAAVVR_					0	0	0			REV__ENST00000584522.1_1_17:27893363-27893582:+|nuORF	REV__ENST00000584522.1_1_17:27893363-27893582:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.20367431640625	2	471.771991	941.529429	-0.67704	-0.00031941	0.68882	0.00032497	0.011778	5.5567E-06	471.77214537347623	28.373	0.74198	28.276	27.84	28.582	-0.096947					26	17	2	0	0	0	0.20789	1	1739	1739		32.812	0	1	91268	+		6116	29081	4241	4247	6923	6923					0.05632589646040742
EGRDVVIALK	10	Unmodified	_EGRDVVIALK_					0	0	0		ENSG00000162753|ENST00000367714|SLC9C2	ENSG00000162753|ENST00000367714|SLC9C2	ENSG00000162753|ENST00000367714|SLC9C2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.3275146484375	2	550.327131	1098.63971	-0.4914	-0.00027043	0.44675	0.00024586	-0.044654	-2.4574E-05	550.3274966608972	100.46	1.192	100.46	99.887	101.08	0					71	27	3	0	0	0	0.86471	1	10153	10153		30.318	0	1	339490			6117	5731	4242	4248	6924	6924					0.09433389914420331
EGRFGAKCS	9	Unmodified	_EGRFGAKCS_					0	0	0			REV__nc|ENSG00000162591|O75095-2|MEGF6	REV__nc|ENSG00000162591|O75095-2|MEGF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.726806640625	2	477.726726	953.4389	2.2506	0.0010752	1.7118	0.00081776	3.9624	0.0018929	477.72739736159696	103.26	1.4958	103.52	103.26	104.76	0.26524					60	35	3	0	0	0	0.76764	1	12636	12636		34.173	2.2177	1	4216400	+		6118	20822	4243	4249	6925	6925					-0.039682026738887544
EGRFNFSA	8	Unmodified	_EGRFNFSA_					0	0	0		ENSG00000145888|ENST00000274576|GLRA1;nc|ENSG00000145888|P23415|GLRA1	ENSG00000145888|ENST00000274576|GLRA1	ENSG00000145888|ENST00000274576|GLRA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2182922363281	2	464.219591	926.42463	-1.3674	-0.00063479	1.614	0.00074927	0.24659	0.00011447	464.2199850018243	35.798	0.91559	35.807	35.34	36.256	0.0092812					41	19	3	0	0	0	0.89679	1	2272	2272		37.812	0.65241	1	116880			6119	4801	4244	4250	6926	6926					-0.041525318305275505
EGRKRILVIQ	10	Unmodified	_EGRKRILVIQ_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.5893859863281	3	404.59094	1210.75099	0.081752	3.3076E-05	-4.4169	-0.001787	-4.3351	-0.0017539	404.58905474066694	39.518	1.496	39.488	38.762	40.258	-0.03027					92	35	3	0	0	0	0.86621	1	2738	2738		26.063	0	1	403230			6120	5333	4245	4251	6927	6927					0.15404449342349835
EGRKRILVIQ	10	Unmodified	_EGRKRILVIQ_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.5887451171875	3	404.59094	1210.75099	-1.9042	-0.00077041	-2.37	-0.0009589	-4.2742	-0.0017293	404.58983696837504	39.349	1.3734	39.36	38.786	40.16	0.010708					98	36	4	0	0	0	0.85259	1	2396	2396		20.03	0	1	332570			6121	5333	4245	4251	6928	6928					0.15404449342349835
EGRKRKQK	8	Unmodified	_EGRKRKQK_					0	0	0		ENST00000419781.5_1_2:135676117-135676261:+|nuORF	ENST00000419781.5_1_2:135676117-135676261:+|nuORF	ENST00000419781.5_1_2:135676117-135676261:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	515.779296875	2	515.317432	1028.62031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.399	1	69.399	68.899	69.899	0								0	0	0	0.29871	1	6184	6184		23.042	0	1				6122	11440	4246	4252	6929	6929					0.10714478414161022
EGRRWPRWCQP	11	Unmodified	_EGRRWPRWCQP_					0	0	0		ENST00000477826.5_1_6:31939861-31939906:-|nuORF	ENST00000477826.5_1_6:31939861-31939906:-|nuORF	ENST00000477826.5_1_6:31939861-31939906:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7962646484375	3	490.910567	1469.70987	-0.13937	-6.8419E-05	2.8604	0.0014042	2.721	0.0013358	490.91211459155215	50.805	0.41406	51.24	51.036	51.45	0.43505					14	9	2	0	0	0	0.17648	1	5035	5035		15.921	0	1	253150			6123	12364	4247	4253	6930	6930					-0.006196349687343172
EGRSRKSL	8	Unmodified	_EGRSRKSL_					0	0	0		ENST00000419850.1_2_11:5705367-5706176:-|nuORF;ENST00000380034.7_1_11:5701415-5706176:-|nuORF	ENST00000419850.1_2_11:5705367-5706176:-|nuORF	ENST00000419850.1_2_11:5705367-5706176:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2652282714844	2	466.76724	931.519927	-0.015772	-7.3618E-06	-2.603	-0.001215	-2.6187	-0.0012223	466.7656827319864	36.802	0.53479	36.783	36.553	37.087	-0.018673					19	11	2	0	0	0	0.4196	1	2375	2375		31.53	0	1	62485			6124	10911	4248	4254	6931	6931					0.051428213605163364
EGRVNKQLL	9	Unmodified	_EGRVNKQLL_					0	0	0			REV__ENST00000493884.5_1_1:159023280-159024688:+|nuORF	REV__ENST00000493884.5_1_1:159023280-159024688:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3275146484375	2	528.811648	1055.60874	-0.036774	-1.9446E-05	1.144	0.00060495	1.1072	0.00058551	528.8142893348312	46.188	1.7937	46.109	45.268	47.061	-0.079002					71	49	2	0	0	0	0.20789	1	3441	3441		29.15	4.6304	1	199400	+		6125	27704	4249	4255	6932	6932					0.08316236600194316
EGRWQWAMKRQ	11	Unmodified	_EGRWQWAMKRQ_					0	0	0			REV__ENST00000537064.5_1_12:133235217-133253139:-|nuORF	REV__ENST00000537064.5_1_12:133235217-133253139:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.58172607421875	3	492.582338	1474.72519	-0.23933	-0.00011789	-0.80481	-0.00039643	-1.0441	-0.00051433	492.58192512611373	25.162	0.66678	25.121	24.844	25.511	-0.04117					39	17	3	0	0	0	0.75457	1	1043	1043		21.032	3.1991	1	133120	+		6126	22178	4250	4256	6933	6933					0.006812318284119101
EGSGSPVRPPV	11	Unmodified	_EGSGSPVRPPV_					0	0	0		ENSG00000258713|ENST00000603872|C20orf141	ENSG00000258713|ENST00000603872|C20orf141	ENSG00000258713|ENST00000603872|C20orf141	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	541.2880859375	2	541.285463	1080.55637	-1.7029	-0.00092177	1.6465	0.00089123	-0.056423	-3.0541E-05	541.2862100780545	20.29	0.5934	20.29	20.067	20.66	0					57	27	3	0	0	0	0.73893	1	486	486		24.519	0.31644	1	123340			6127	8912	4251	4257	6934	6934					0.019316534665676954
EGSKKGAR	8	Unmodified	_EGSKKGAR_					0	0	0		ENSG00000060558|ENST00000262958|GNA15	ENSG00000060558|ENST00000262958|GNA15	ENSG00000060558|ENST00000262958|GNA15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.73675537109375	2	416.735409	831.456264	-0.50287	-0.00020956	4.189	0.0017457	3.6861	0.0015361	416.73707926585416	38.454	0.98293	38.977	38.513	39.496	0.52235					52	23	3	0	0	0	0.8347	1	3200	3200		23.042	1.0826	1	1833100			6128	1063	4252	4258	6935	6935					0.0337946092341781
EGSKKSLS	8	Unmodified	_EGSKKSLS_					0	0	0		ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.22967529296875	2	418.229625	834.444697	-0.35677	-0.00014921	0.79307	0.00033169	0.4363	0.00018248	418.22978342070365	27.231	0.86749	27.192	26.805	27.673	-0.038523					34	21	3	0	0	0	0.73851	1	1297	1297		65.803	7.0212	1	72905			6129	6665	4253	4259	6936	6936					0.020852191094377304
EGSKKSLS	8	Unmodified	_EGSKKSLS_					0	0	0		ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	418.229625	834.444697	-2.0671	-0.00086454	2.2256	0.00093081	0.15847	6.6275E-05	418.23042574358635	27.314	0.59475	27.314	26.999	27.594	0	0.062831	0.001549	NaN	65.803	31	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36495			6130	6665	4253	4259							0.020852191094377304
EGSKKSLS	8	Unmodified	_EGSKKSLS_					0	0	0		ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	418.229625	834.444697	-1.9049	-0.0007967	2.3557	0.00098521	0.45073	0.00018851	418.2305416167662	27.224	0.65498	27.293	27.027	27.682	0.068678	0.041372	0.0016578	NaN	65.803	43	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77760			6131	6665	4253	4259							0.020852191094377304
EGSLDTIGFPQ	11	Unmodified	_EGSLDTIGFPQ_					0	0	0			REV__nc|ENSG00000157766|P16112-3|ACAN	REV__nc|ENSG00000157766|P16112-3|ACAN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.2814331054688	2	582.282586	1162.55062	-2.1608	-0.0012582	2.2954	0.0013366	0.13464	7.8396E-05	582.283730076334	39.456	0.76717	39.824	39.384	40.151	0.36797					47	17	3	0	0	0	0.12325	1	3305	3305		87.696	2.5356	1	874600	+		6132	20562	4254	4260	6937	6937					-0.02415489835743756
EGSLLLLLLV	10	Unmodified	_EGSLLLLLLV_					0	0	0			REV__ENST00000174618.4_1_17:2289655-2289982:-|nuORF	REV__ENST00000174618.4_1_17:2289655-2289982:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.292236328125	2	535.347	1068.67945	-0.30072	-0.00016099	0.020611	1.1034E-05	-0.2801	-0.00014995	535.3468340052593	82.006	1.0465	82.432	82.12	83.166	0.42645					49	25	3	0	0	0	0.37624	1	9575	9575		15.642	4.7763	1	793200	+		6133	24081	4255	4261	6938	6938					0.1478551686514038
EGSLPCNLLL	10	Unmodified	_EGSLPCNLLL_					0	0	0			REV__ENSG00000135763|ENST00000258243|URB2	REV__ENSG00000135763|ENST00000258243|URB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.7813110351562	2	529.781167	1057.54778	-0.13962	-7.3969E-05	-0.028814	-1.5265E-05	-0.16844	-8.9235E-05	529.7810141350252	55.485	1.008	55.548	55.314	56.322	0.063721					89	41	3	0	0	0	0.86452	1	4666	4666		30.504	1.3541	1	562490	+		6134	19246	4256	4262	6939	6939					0.021309635057377818
EGSQHEEAC	9	Unmodified	_EGSQHEEAC_					0	0	0		nc|ENSG00000138162|O95359-3|TACC2;ENSG00000138162|ENST00000369005|TACC2	nc|ENSG00000138162|O95359-3|TACC2	nc|ENSG00000138162|O95359-3|TACC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.1844482421875	2	495.185088	988.355624	-0.0053616	-2.655E-06	-2.6768	-0.0013255	-2.6822	-0.0013282	495.18363114208614	53.439	0.75228	53.434	53.184	53.936	-0.0053711					30	18	2	0	0	0	0.7932	1	4694	4694		21.96	1.013	1	343430			6135	4278	4257	4263	6940	6940					-0.13901983912410287
EGSRRLGGGP	10	Unmodified	_EGSRRLGGGP_					0	0	0			REV__ENST00000326270.13_1_17:60556483-60558487:+|nuORF	REV__ENST00000326270.13_1_17:60556483-60558487:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.2459716796875	2	493.262322	984.510091	-1.1615	-0.00057293	1.8853	0.00092995	0.7238	0.00035702	493.26253143537855	27.918	0.21418	27.894	27.73	27.944	-0.023556					6	5	2	0	0	0	0.37624	1	1298	1298		39.253	11.371	1	12196	+		6136	25075	4258	4264	6941	6941					0.01721633355157337
EGSTVDCL	8	Unmodified	_EGSTVDCL_					0	0	0		ENSG00000185313|ENST00000449082|SCN10A	ENSG00000185313|ENST00000449082|SCN10A	ENSG00000185313|ENST00000449082|SCN10A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.1796875	2	412.178743	822.342934	2.9113	0.0012	-0.39998	-0.00016486	2.5113	0.0010351	412.1784573510725	19.137	0.54625	19.062	18.847	19.393	-0.074974					30	18	2	0	0	0	0.88915	1	387	387		35.201	0	1	80949			6137	7701	4259	4265	6942	6942					-0.07534395304651298
EGSWNYKLN	9	Unmodified	_EGSWNYKLN_					0	0	0		nc|ENSG00000122432|Q5VX52-4|SPATA1;ENSG00000122432|ENST00000699524|SPATA1;nc|ENSG00000122432|Q5VX52|SPATA1;nc|ENSG00000122432|Q5VX52-2|SPATA1	nc|ENSG00000122432|Q5VX52-4|SPATA1	nc|ENSG00000122432|Q5VX52-4|SPATA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.7667236328125	2	555.764363	1109.51417	-0.23323	-0.00012962	0.10539	5.8572E-05	-0.12784	-7.1048E-05	555.7642241817503	49.391	0.84095	49.367	49.103	49.943	-0.024033					24	18	2	0	0	0	0.51307	1	4234	4234		51.335	6.9583	1	120380			6138	3224	4260	4266	6943	6943					-0.036203219417984656
EGTHIMQH	8	Oxidation (M)	_EGTHIM(Oxidation (M))QH_		EGTHIM(1)QH		EGTHIM(52)QH	0	0	1			REV__nc|ENSG00000197024|Q8TD17-2|ZNF398	REV__nc|ENSG00000197024|Q8TD17-2|ZNF398	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71820068359375	2	484.716359	967.418164	1.0671	0.00051723	2.8185	0.0013662	3.8855	0.0018834	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.93529	1	11767	11767		52.299	7.7681	1	7522200	+		6139	20146	4261	4267	6944	6944		299			-0.06684793053545945
EGTHIMQH	8	Oxidation (M)	_EGTHIM(Oxidation (M))QH_		EGTHIM(1)QH		EGTHIM(41)QH	0	0	1			REV__nc|ENSG00000197024|Q8TD17-2|ZNF398	REV__nc|ENSG00000197024|Q8TD17-2|ZNF398	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7180480957031	2	484.716359	967.418164	1.8339	0.00088894	1.6352	0.00079259	3.4691	0.0016815	484.717227769282	100.08	1.4855	100.42	100.11	101.59	0.3459					119	38	5	0	0	0	0.90465	1	12284	12284		40.573	7.057	1	10268000	+		6140	20146	4261	4267	6945	6945		299			-0.06684793053545945
EGTHIMQH	8	Oxidation (M)	_EGTHIM(Oxidation (M))QH_		EGTHIM(1)QH		EGTHIM(42)QH	0	0	1			REV__nc|ENSG00000197024|Q8TD17-2|ZNF398	REV__nc|ENSG00000197024|Q8TD17-2|ZNF398	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.718505859375	2	484.716359	967.418164	2.3825	0.0011548	0.90536	0.00043884	3.2879	0.0015937	484.7166371301368	101.76	0.68322	102.09	101.69	102.37	0.3251					30	16	3	0	0	0	0.91005	1	12403	12403		42.474	8.9589	1	872220	+		6141	20146	4261	4267	6946	6946		299			-0.06684793053545945
EGTHVRQHSQ	10	Unmodified	_EGTHVRQHSQ_					0	0	0			REV__ENST00000588883.5_1_19:44679604-44681824:+|nuORF	REV__ENST00000588883.5_1_19:44679604-44681824:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.7882080078125	2	589.786693	1177.55883	-0.32914	-0.00019412	2.6205	0.0015455	2.2914	0.0013514	589.7881126572679	30.566	0.63951	30.591	30.296	30.936	0.025013					41	19	3	0	0	0	0.70553	1	1602	1602		44.377	3.599	1	124060	+		6142	29151	4262	4268	6947	6947					-0.02284498075778174
EGVLELLPL	9	Unmodified	_EGVLELLPL_					0	0	0			REV__ENSG00000143384|ENST00000369026|MCL1	REV__ENSG00000143384|ENST00000369026|MCL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7959899902344	2	491.794601	981.574648	-1.7104	-0.00084119	3.9454	0.0019403	2.2349	0.0010991	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.7932	2	3995	3995;4198		23.042	1.3402	1	1232600	+		6143	19803	4263	4269	6948;6949	6948					0.08312395388577443
EGVRGKGP	8	Unmodified	_EGVRGKGP_					0	0	0			REV__ENST00000444537.5_1_2:165636273-165698319:-|nuORF	REV__ENST00000444537.5_1_2:165636273-165698319:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.225830078125	2	400.224677	798.434801	-0.073338	-2.9352E-05	4.3831	0.0017542	4.3097	0.0017249	400.22636614843225	35.501	1.6335	35.44	35.254	36.887	-0.060337					96	46	3	0	0	0	0.87479	1	1891	1891		30.504	0	1	419330	+		6144	26790	4264	4270	6950	6950					0.027520758947161994
EGYGLTTASL	10	Unmodified	_EGYGLTTASL_					0	0	0			REV__ENSG00000029559|ENST00000226284|IBSP	REV__ENSG00000029559|ENST00000226284|IBSP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.2530517578125	2	506.253297	1010.49204	-1.6382	-0.00082933	1.5306	0.00077487	-0.10758	-5.4464E-05	506.25395587471024	37.705	1.0151	37.705	37.395	38.41	0					69	24	5	0	0	0	0.46422	1	2268	2268		58.782	7.4465	1	1276600	+		6145	16269	4265	4271	6951	6951					-0.012785464102535116
EGYNQIEKSPV	11	Unmodified	_EGYNQIEKSPV_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	632.3136596679688	2	632.314417	1262.61428	1.3226	0.0008363	-1.2967	-0.00081991	0.025918	1.6388E-05	632.3135227160251	58.004	0.85824	58.558	58.189	59.047	0.55323					34	20	2	0	0	0	0.50531	1	6075	6075		51.528	7.877	1	525470	+		6146	21064	4266	4272	6952	6952					-0.006521293986679666
EGYNQIEKSPV	11	Unmodified	_EGYNQIEKSPV_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	632.314417	1262.61428	-0.89217	-0.00056413	0.88735	0.00056109	-0.0048172	-3.046E-06	632.3148611185889	58.078	0.7849	58.472	58.158	58.943	0.39408	-0.042819	0.001072	NaN	51.528	39	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	521370	+		6147	21064	4266	4272							-0.006521293986679666
EGYNQIEKSPV	11	Unmodified	_EGYNQIEKSPV_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	REV__nc|ENSG00000164304|Q8TC20-4|CAGE1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	632.314417	1262.61428	1.3226	0.0008363	-1.2967	-0.00081991	0.025918	1.6388E-05	632.3135227160251	58.004	0.85824	58.558	58.189	59.047	0.55323	0.042819	-0.00169	NaN	51.528	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	525470	+		6148	21064	4266	4272							-0.006521293986679666
EHALLVYTL	9	Unmodified	_EHALLVYTL_					0	0	0		ENST00000509116.1_1_4:135966876-135967059:+|nuORF	ENST00000509116.1_1_4:135966876-135967059:+|nuORF	ENST00000509116.1_1_4:135966876-135967059:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.7632446289062	2	529.797675	1057.5808	0.90207	0.00047791	3.4481	0.0018268	4.3502	0.0023047	530.3001521821889	84.386	1.3078	84.445	83.629	84.937	0.05925					31	29	2	0	0	0	0.20789	1	8558	8558		30.504	12.179	1	38634			6149	12985	4267	4273	6953	6953					0.05430913620079991
EHCEKIKRA	9	Unmodified	_EHCEKIKRA_					0	0	0		ENST00000429118.1_1_9:94374035-94374428:+|nuORF	ENST00000429118.1_1_9:94374035-94374428:+|nuORF	ENST00000429118.1_1_9:94374035-94374428:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	556.307373046875	2	557.295307	1112.57606	0.76459	0.0004261	-0.21601	-0.00012038	0.54858	0.00030572	557.2951222152019	90.48	1.3718	90.634	89.701	91.072	0.15388					55	32	2	0	0	0	0.20789	1	9071	9071		20.947	0	1	98808			6150	11602	4268	4274	6954	6954					0.024277062056853538
EHDMLLKAI	9	Unmodified	_EHDMLLKAI_					0	0	0			REV__nc|ENSG00000120498|Q8IYF3-2|TEX11	REV__nc|ENSG00000120498|Q8IYF3-2|TEX11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	535.81396484375	2	535.289159	1068.56377	-1.5	-0.00080296	-3.4674	-0.0018561	-4.9675	-0.002659	535.2871733283913	99.121	2.0608	99.306	98.367	100.43	0.18582					74	47	3	0	0	0	0.20789	1	10277	10277		29.15	3.6994	1	249910	+		6151	18414	4269	4275	6955	6955					0.03222669742626749
EHFPFGECCCA	11	Unmodified	_EHFPFGECCCA_					0	0	0			REV__ENSG00000178295|ENST00000381254|GEN1	REV__ENSG00000178295|ENST00000381254|GEN1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.7197265625	2	621.722469	1241.43039	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.43	1	111.5	111	112	0.069542								0	0	0	0.56276	1	11991	11991		20.947	4.4738	1		+		6152	22272	4270	4276	6956	6956					-0.1806726069701199
EHGARTDICF	10	Unmodified	_EHGARTDICF_					0	0	0		nc|ENSG00000144504|Q9P2S6-3|ANKMY1;nc|ENSG00000144504|Q9P2S6-4|ANKMY1;nc|ENSG00000144504|Q9P2S6-2|ANKMY1;nc|ENSG00000144504|Q9P2S6|ANKMY1;ENSG00000144504|ENST00000401804|ANKMY1	nc|ENSG00000144504|Q9P2S6-3|ANKMY1	nc|ENSG00000144504|Q9P2S6-3|ANKMY1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.761962890625	2	574.761297	1147.50804	-1.5692	-0.00090192	1.8346	0.0010545	0.26538	0.00015253	574.7622021064316	57.79	0.83128	58.184	57.78	58.611	0.39407					43	18	3	0	0	0	0.80179	1	6052	6052		39.253	1.4413	1	1326000			6153	4714	4271	4277	6957	6957					-0.05981163444971571
EHGCCGCC	8	Unmodified	_EHGCCGCC_					0	0	0			REV__ENSG00000169908|ENST00000305366|TM4SF1	REV__ENSG00000169908|ENST00000305366|TM4SF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2487487792969	2	406.103144	810.191735	1.1462	0.00046549	1.0952	0.00044477	2.2414	0.00091026	406.10321228860863	88.561	0.19417	88.487	88.397	88.592	-0.074005					6	4	2	0	0	0	0.4196	1	9214	9214		1.619	1.619	1	21335	+		6154	21614	4272	4278	6958	6958					-0.22095319480149556
EHGLGTLLDH	10	Unmodified	_EHGLGTLLDH_					0	0	0		ENST00000372865.4_2_20:43348730-43356064:+|nuORF	ENST00000372865.4_2_20:43348730-43356064:+|nuORF	ENST00000372865.4_2_20:43348730-43356064:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.250732421875	2	546.277638	1090.54072	0.39116	0.00021368	2.8776	0.001572	3.2688	0.0017857	546.2791140327308	49.579	0.79688	49.583	49.235	50.032	0.0035973					30	17	2	0	0	0	0.37624	1	4225	4225		35.618	13.916	1	127160			6155	10719	4273	4279	6959	6959					-0.0009263305048534676
EHGRQGAPAP	10	Unmodified	_EHGRQGAPAP_					0	0	0		ENSG00000169258|ENST00000303991|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.23834228515625	2	510.254497	1018.49444	-1.508	-0.00076945	-0.6765	-0.00034519	-2.1845	-0.0011146	510.25423368024366	36.278	0.4053	36.288	36.073	36.478	0.0092773					11	8	2	0	0	0	0.37624	1	2356	2356		49.536	3.5638	1	30408			6156	6483	4274	4280	6960	6960					-0.01406653161916438
EHGTNGLAH	9	Unmodified	_EHGTNGLAH_					0	0	0			REV__nc|ENSG00000161249|Q6E0U4-7|DMKN	REV__nc|ENSG00000161249|Q6E0U4-7|DMKN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.72601318359375	2	468.220123	934.425693	-0.074501	-3.4883E-05	-3.0778	-0.0014411	-3.1523	-0.001476	468.2167109232761	55.718	0.16494	56.119	55.991	56.156	0.40101					5	3	2	0	0	0	0.20789	1	5708	5708		14.865	0	1	49055	+	+	6157	15957	4275	4281	6961	6961					-0.044143174616351644
EHHNLRAVL	9	Unmodified	_EHHNLRAVL_					0	0	0		ENST00000400911.7_1_12:6575036-6575099:-|nuORF	ENST00000400911.7_1_12:6575036-6575099:-|nuORF	ENST00000400911.7_1_12:6575036-6575099:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3165893554688	2	544.801614	1087.58868	-1.4691	-0.00080036	4.1166	0.0022428	2.6476	0.0014424	545.3038616802849	88.385	0.16032	88.557	88.458	88.618	0.17234					5	3	2	0	0	0	0.20789	1	8735	8735		44.117	17.424	1	53207			6158	11230	4276	4282	6962	6962					0.048384856602069704
EHIDTHTY	8	Unmodified	_EHIDTHTY_					0	0	0		ENST00000397112.8_1_12:100567303-100567363:-|nuORF	ENST00000397112.8_1_12:100567303-100567363:-|nuORF	ENST00000397112.8_1_12:100567303-100567363:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2278747558594	2	508.227613	1014.44067	-0.081845	-4.1596E-05	-0.037261	-1.8937E-05	-0.11911	-6.0533E-05	508.2275986329524	29.99	0.68885	29.947	29.589	30.278	-0.043095					33	14	3	0	0	0	0.86791	1	1583	1583		28.254	0.37203	1	114440			6159	11139	4277	4283	6963	6963					-0.06596870384294107
EHILRNPVR	9	Unmodified	_EHILRNPVR_					0	0	0			REV__ENST00000512416.5_1_17:48625445-48625815:+|nuORF	REV__ENST00000512416.5_1_17:48625445-48625815:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.32958984375	2	567.330539	1132.64652	1.497	0.00084932	-2.8559	-0.0016202	-1.3589	-0.00077092	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.67345	1	9911	9911		42.396	15.703	1	15259000	+		6160	27837	4278	4284	6964	6964					0.08550747585650242
EHILRNPVR	9	Unmodified	_EHILRNPVR_					0	0	0			REV__ENST00000512416.5_1_17:48625445-48625815:+|nuORF	REV__ENST00000512416.5_1_17:48625445-48625815:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3300170898438	2	567.330539	1132.64652	0.79571	0.00045143	-2.2136	-0.0012558	-1.4178	-0.00080439	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.78983	1	9283	9283		27.882	1.1893	1	18145000	+		6161	27837	4278	4284	6965	6965					0.08550747585650242
EHIWLNLKR	9	Unmodified	_EHIWLNLKR_					0	0	0			REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3666381835938	2	604.848564	1207.68258	1.0513	0.00063585	-2.1814	-0.0013194	-1.1301	-0.00068356	604.8465944434046	104.86	0.33318	105.03	104.81	105.14	0.17096					9	7	2	0	0	0	0.20789	1	11166	11166		16.473	0	1	113380	+		6162	18928	4279	4285	6966	6966					0.08704204762489098
EHKLKWTFKIY	11	Unmodified	_EHKLKWTFKIY_					0	0	0		ENSG00000112599|ENST00000230361|GUCA1B	ENSG00000112599|ENST00000230361|GUCA1B	ENSG00000112599|ENST00000230361|GUCA1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.28240966796875	3	498.281883	1491.82382	0.073269	3.6509E-05	2.0421	0.0010175	2.1154	0.0010541	498.2828337356639	33.35	0.68129	33.353	32.989	33.67	0.0030785					42	15	4	0	0	0	0.76892	1	1943	1943		17.833	1.3033	1	125790			6163	2672	4280	4286	6967	6967					0.09758158345107404
EHLHLVGR	8	Unmodified	_EHLHLVGR_					0	0	0			REV__nc|ENSG00000103546|P23975-3|SLC6A2	REV__nc|ENSG00000103546|P23975-3|SLC6A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.771240234375	2	480.772326	959.530098	-2.5003	-0.0012021	0.60114	0.00028901	-1.8991	-0.00091306	480.7724817241375	41.101	0.70321	41.107	40.803	41.506	0.0065727					33	18	2	0	0	0	0.92973	1	3015	3015		50.025	4.0726	1	446290	+		6164	17421	4281	4287	6968	6968					0.048714290857674314
EHLILQKIPPR	11	Unmodified	_EHLILQKIPPR_					0	0	0		ENST00000419783.1_2_3:49394673-49394790:-|nuORF	ENST00000419783.1_2_3:49394673-49394790:-|nuORF	ENST00000419783.1_2_3:49394673-49394790:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.60980224609375	3	448.610111	1342.8085	-0.14499	-6.5045E-05	-1.4878	-0.00066745	-1.6328	-0.0007325	448.60923938529277	75.242	1.1404	75.288	74.855	75.996	0.045952					95	34	4	0	0	0	0.79224	1	7199	7199		12.957	0.52465	1	303390			6165	11441	4282	4288	6969	6969					0.15081291547903675
EHLISHYFCDI	11	Unmodified	_EHLISHYFCDI_					0	0	0		ENSG00000196119|ENST00000284287|OR8A1;nc|ENSG00000196119|Q8NGG7|OR8A1	ENSG00000196119|ENST00000284287|OR8A1	ENSG00000196119|ENST00000284287|OR8A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.260498046875	3	459.5483	1375.62307	0.71634	0.00032919	-1.832	-0.00084189	-1.1157	-0.0005127	459.54737313252	28.604	0.51454	28.431	28.16	28.674	-0.17336					18	12	2	0	0	0	0.17955	1	1779	1779		8.7993	0	1	59186			6166	8012	4283	4289	6970	6970					-0.04971479033838477
EHLKSFVS	8	Unmodified	_EHLKSFVS_					0	0	0			REV__ENSG00000175175|ENST00000308249|PPM1E	REV__ENSG00000175175|ENST00000308249|PPM1E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.7549133300781	2	473.753267	945.491981	0.68447	0.00032427	3.4813	0.0016493	4.1658	0.0019736	473.75487965089945	15.485	0.29465	15.461	15.325	15.62	-0.024207					10	8	2	0	0	0	0.87064	1	41	41		29.15	2.3535	1	54548	+		6167	22045	4284	4290	6971	6971					0.01705498380431436
EHLRAMFETGP	11	Unmodified	_EHLRAMFETGP_					0	0	0			REV__ENSG00000114127|ENST00000392981|XRN1	REV__ENSG00000114127|ENST00000392981|XRN1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	644.3118896484375	2	644.311155	1286.60776	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.649	1	15.649	15.149	16.149	0								0	0	0	0.56276	1	52	52		41.427	6.2484	1		+		6168	18034	4285	4291	6972	6972					-0.024083458310542483
EHLTQKKIG	9	Unmodified	_EHLTQKKIG_					0	0	0		nc|ENSG00000144452|Q86UK0-2|ABCA12;ENSG00000144452|ENST00000272895|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.305908203125	2	527.306198	1052.59784	-0.62415	-0.00032912	-2.1989	-0.0011595	-2.8231	-0.0014886	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.78983	1	10159	10159		27.882	2.3082	1	949980			6169	4708	4286	4292	6973	6973					0.07364834225904815
EHLTQSIVP	9	Unmodified	_EHLTQSIVP_					0	0	0		nc|ENSG00000134909|A7KAX9|ARHGAP32;ENSG00000134909|ENST00000682385|ARHGAP32;nc|ENSG00000134909|A7KAX9-2|ARHGAP32	nc|ENSG00000134909|A7KAX9|ARHGAP32	nc|ENSG00000134909|A7KAX9|ARHGAP32	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.260009765625	2	512.277106	1022.53966	0.74396	0.00038111	2.122	0.001087	2.8659	0.0014682	512.2771982879	29.942	0.38546	29.853	29.619	30.004	-0.089544					13	8	2	0	0	0	0.20789	1	1912	1912		30.318	10.958	1	60995			6170	3971	4287	4293	6974	6974					0.0292915258062294
EHMITQMIK	9	2 Oxidation (M)	_EHM(Oxidation (M))ITQM(Oxidation (M))IK_		EHM(1)ITQM(1)IK		EHM(96)ITQM(96)IK	0	0	2			REV__ENSG00000121101|ENST00000349033|TEX14	REV__ENSG00000121101|ENST00000349033|TEX14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.8035278320312	2	581.783384	1161.55222	-1.3061	-0.00075986	-4.3549	-0.0025336	-5.661	-0.0032935	581.7806211487484	64.94	0.39584	64.967	64.799	65.195	0.027138					16	11	2	0	0	0	0.12953	1	6129	6129		96.19	27.404	1	81887	+		6171	18446	4288	4294	6975	6975		267;268			-0.022098953430258916
EHMMREMAE	9	Unmodified	_EHMMREMAE_					0	0	0			REV__nc|ENSG00000159625|Q8IY82-2|DRC7	REV__nc|ENSG00000159625|Q8IY82-2|DRC7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.353515625	2	582.235744	1162.45693	-0.84676	-0.00049302	0.015936	9.2786E-06	-0.83083	-0.00048374	582.2359595209153	103.6	0.27666	103.59	103.39	103.67	-0.0035706					11	6	2	0	0	0	0.20789	1	11121	11121		14.865	0	1	68882	+		6172	20670	4289	4295	6976	6976					-0.11779571805686828
EHNVSPGYN	9	Unmodified	_EHNVSPGYN_					0	0	0		ENST00000499638.6_1_12:121661214-121671021:+|nuORF;ENST00000543318.5_1_12:121659934-121671349:+|nuORF;nc|ENSG00000135124|Q99571-3|P2RX4;ENSG00000135124|ENST00000337233|P2RX4;nc|ENSG00000135124|Q99571-2|P2RX4;ENST00000538417.2_3_12:121659934-121670193:+|nuORF;ENST00000543430.5_1_12:121659934-121670518:+|nuORF	ENST00000499638.6_1_12:121661214-121671021:+|nuORF	ENST00000499638.6_1_12:121661214-121671021:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.7231140136719	2	508.725238	1015.43592	-1.1056	-0.00056247	-0.13874	-7.0581E-05	-1.2444	-0.00063305	508.72470773188326	66.605	0.62052	66.634	66.393	67.013	0.028587					48	29	2	0	0	0	0.73802	1	6323	6323		37.812	0.65241	1	137630			6173	3987	4290	4296	6977	6977					-0.07117754527041598
EHQQRILKTL	10	Unmodified	_EHQQRILKTL_					0	0	0			REV__ENSG00000132024|ENST00000318003|CC2D1A	REV__ENSG00000132024|ENST00000318003|CC2D1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5818176269531	3	422.582333	1264.72517	0.70592	0.00029831	-1.5007	-0.00063419	-0.79483	-0.00033588	422.58159999345827	97.435	2.4101	97.596	96.789	99.199	0.16074					159	55	4	0	0	0	0.86047	1	10181	10181		28.577	6.0151	1	461560	+		6174	18982	4291	4297	6978	6978					0.1033955510006308
EHRKKQHVF	9	Unmodified	_EHRKKQHVF_					0	0	0		nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1;ENST00000467056.5_1_3:4536161-4687445:+|nuORF	nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3666381835938	2	604.835988	1207.65742	1.0527	0.00063671	0.85656	0.00051808	1.9093	0.0011548	604.8384751536335	105.01	0.1631	105.17	105.09	105.25	0.15925					5	3	2	0	0	0	0.20789	1	11166	11166		20.947	0	1	35188			6175	5087	4292	4298	6979	6979					0.06190149959934388
EHRQKILKVG	10	Unmodified	_EHRQKILKVG_					0	0	0			REV__ENSG00000197748|ENST00000357060|CFAP43	REV__ENSG00000197748|ENST00000357060|CFAP43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3658447265625	2	604.367121	1206.71969	-0.16822	-0.00010167	-0.91026	-0.00055013	-1.0785	-0.0006518	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.8651	1	11061	11061		25.574	2.5316	1	47715000	+		6176	23265	4293	4299	6980	6980					0.12459876308253115
EHRQKILKVG	10	Unmodified	_EHRQKILKVG_					0	0	0			REV__ENSG00000197748|ENST00000357060|CFAP43	REV__ENSG00000197748|ENST00000357060|CFAP43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3667602539062	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.8651	1	11514	11514		25.574	2.0514	1	63350000	+		6177	23265	4293	4299	6981	6981					0.12459876308253115
EHRQKILKVG	10	Unmodified	_EHRQKILKVG_					0	0	0			REV__ENSG00000197748|ENST00000357060|CFAP43	REV__ENSG00000197748|ENST00000357060|CFAP43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3668212890625	2	604.367121	1206.71969	3.2045	0.0019367	-4.3338	-0.0026192	-1.1294	-0.00068255	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.86348	1	11692	11692		31.53	1.2121	1	63446000	+		6178	23265	4293	4299	6982	6982					0.12459876308253115
EHRQKILKVG	10	Unmodified	_EHRQKILKVG_					0	0	0			REV__ENSG00000197748|ENST00000357060|CFAP43	REV__ENSG00000197748|ENST00000357060|CFAP43	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3665771484375	2	604.367121	1206.71969	3.6458	0.0022034	-4.4074	-0.0026637	-0.76167	-0.00046033	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.86272	1	12740	12740		24.519	0	1	5883900	+		6179	23265	4293	4299	6983	6983					0.12459876308253115
EHRSFAKLL	9	Unmodified	_EHRSFAKLL_					0	0	0			REV__ENSG00000162592|ENST00000294600|CCDC27	REV__ENSG00000162592|ENST00000294600|CCDC27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.8115844726562	2	550.81419	1099.61383	-0.50482	-0.00027806	-4.3901	-0.0024181	-4.8949	-0.0026962	550.8117175069709	61.086	0.80542	61.117	60.898	61.703	0.0312					50	40	2	0	0	0	0.76764	1	5701	5701		34.173	5.0025	1	1025000	+		6180	20823	4294	4300	6984	6984					0.06800540462813842
EHSFTELPR	9	Unmodified	_EHSFTELPR_					0	0	0		nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9;ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9	nc|ENSG00000239732|Q9NR96-2|TLR9	nc|ENSG00000239732|Q9NR96-2|TLR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.2776489257812	2	558.277638	1114.54072	0.7407	0.00041351	2.7078	0.0015117	3.4485	0.0019252	558.2791515824711	80.091	0.60709	80.145	79.779	80.386	0.053841					51	23	3	0	0	0	0.76764	1	7953	7953		34.173	0	1	257970			6181	8772	4295	4301	6985	6985					-0.01196633050494711
EHSGKATH	8	Unmodified	_EHSGKATH_					0	0	0		ENSG00000075213|ENST00000265362|SEMA3A	ENSG00000075213|ENST00000265362|SEMA3A	ENSG00000075213|ENST00000265362|SEMA3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.7093811035156	2	433.709391	865.404229	2.0792	0.00090175	-1.7988	-0.00078014	0.2804	0.00012161	433.70846338863225	18.813	1.3077	18.738	18.445	19.753	-0.074974					100	50	3	0	0	0	0.5397	1	353	353		73.975	2.5968	1	1070700			6182	1322	4296	4302	6986	6986					-0.03385702490345466
EHSKYLVHH	9	Unmodified	_EHSKYLVHH_					0	0	0			REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.2942504882812	2	575.293622	1148.57269	-0.40049	-0.0002304	-2.1254	-0.0012228	-2.5259	-0.0014532	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.64922	1	8697	8697		44.117	8.9648	1	1396200	+		6183	19957	4297	4303	6987	6987					0.004347794233353852
EHSPDILKLL	10	Unmodified	_EHSPDILKLL_					0	0	0		ENST00000472173.5_1_X:118112321-118146861:+|nuORF	ENST00000472173.5_1_X:118112321-118146861:+|nuORF	ENST00000472173.5_1_X:118112321-118146861:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3536376953125	2	582.834788	1163.65502	-0.83421	-0.00048621	-1.6938	-0.0009872	-2.528	-0.0014734	582.8340209687078	103.58	0.4351	103.58	103.51	103.95	-0.0035706					14	10	2	0	0	0	0.37624	1	11181	11181		20.947	11.241	1	329130			6184	12259	4298	4304	6988	6988					0.07974256711622729
EHSVAAQKQL	10	Unmodified	_EHSVAAQKQL_					0	0	0			REV__ENST00000328495.9_1_17:16623938-16667555:+|nuORF	REV__ENST00000328495.9_1_17:16623938-16667555:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.759033203125	2	555.798737	1109.58292	0.057734	3.2089E-05	-1.2451	-0.00069202	-1.1874	-0.00065993	555.7982513736869	64.32	0.12638	64.874	64.812	64.939	0.55386					4	2	2	0	0	0	0.37624	1	6969	6969		19.997	0.6368	1	57645	+		6185	25093	4299	4305	6989	6989					0.03251342357907561
EHTSLTIH	8	Unmodified	_EHTSLTIH_					0	0	0			REV__ENSG00000166228|ENST00000299299|PCBD1	REV__ENSG00000166228|ENST00000299299|PCBD1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.2400207519531	2	469.240524	936.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.456	1	74.542	74.042	75.042	0.085907								0	0	0	0.29344	1	6858	6858		31.955	1.4512	1		+		6186	21269	4300	4306	6990	6990					-0.004279761419979877
EHVFIHPG	8	Unmodified	_EHVFIHPG_					0	0	0		ENSG00000182326|ENST00000360817|C1S;ENST00000443875.5_1_12:7174318-7177952:+|nuORF	ENSG00000182326|ENST00000360817|C1S	ENSG00000182326|ENST00000360817|C1S	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.23992919921875	2	468.240327	934.466101	-0.94328	-0.00044168	3.2011	0.0014989	2.2578	0.0010572	468.2416805322929	38.745	0.58432	39.087	38.817	39.401	0.34187					31	13	4	0	0	0	0.90024	1	3202	3202		39.021	3.8208	1	954080			6187	7448	4301	4307	6991	6991					-0.0037535107118173983
EHVRKTHKV	9	Unmodified	_EHVRKTHKV_					0	0	0			REV__ENSG00000178163|ENST00000326756|ZNF518B	REV__ENSG00000178163|ENST00000326756|ZNF518B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3303833007812	2	567.330539	1132.64652	1.203	0.00068247	-1.0748	-0.00060977	0.12815	7.2702E-05	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.7932	1	10743	10743		21.96	1.013	1	4990000	+		6188	22259	4302	4308	6992	6992					0.08550747585650242
EHVYGIPE	8	Unmodified	_EHVYGIPE_					0	0	0		ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB	ENSG00000089597|ENST00000356638|GANAB	ENSG00000089597|ENST00000356638|GANAB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28753662109375	2	472.229625	942.444697	-1.7054	-0.00080533	-3.4652	-0.0016364	-5.1706	-0.0024417	472.2274294432944	95.008	0.12176	95.211	95.11	95.232	0.20242					4	2	2	0	0	0	0.4196	1	9668	9668		19.36	0	1	48468			6189	1627	4303	4309	6993	6993					-0.028827808905703023
EHYDLSIKKL	10	Unmodified	_EHYDLSIKKL_					0	0	0			REV__nc|ENSG00000129003|Q709C8-4|VPS13C	REV__nc|ENSG00000129003|Q709C8-4|VPS13C	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.8699340820312	2	623.34552	1244.67649	-0.06936	-4.3235E-05	-2.0695	-0.00129	-2.1388	-0.0013332	623.3440506516732	104.78	0.53725	104.78	104.62	105.16	0					17	12	2	0	0	0	0.37624	1	10839	10839		19.997	0	1	152240	+		6190	18801	4304	4310	6994	6994					0.06393641740328349
EHYVVLPWL	9	Unmodified	_EHYVVLPWL_					0	0	0			REV__ENST00000481925.1_1_2:220045424-220045941:+|nuORF	REV__ENST00000481925.1_1_2:220045424-220045941:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3104248046875	2	578.313492	1154.61243	-0.93812	-0.00054253	-4.1401	-0.0023943	-5.0782	-0.0029368	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.76996	1	12062	12062		33.516	1.9858	1	3649700	+		6191	19899	4305	4311	6995	6995					0.04130906374030019
EIAHNLFVTR	10	Unmodified	_EIAHNLFVTR_					0	0	0		ENSG00000183208|ENST00000329600|GDPGP1	ENSG00000183208|ENST00000329600|GDPGP1	ENSG00000183208|ENST00000329600|GDPGP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.55889892578125	3	400.555895	1198.64586	2.9038	0.0011631	3.558	0.0014252	6.4618	0.0025883	400.55722775640623	19.611	0.7765	19.541	19.308	20.084	-0.070013					69	31	4	0	0	0	0.60066	1	430	430		50.034	10.16	1	403570			6192	7509	4306	4312	6996	6996					0.054479081459248846
EIALRKRW	8	Unmodified	_EIALRKRW_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.9578247070312	2	536.324725	1070.6349	-1.8858	-0.0010114	-0.80064	-0.0004294	-2.6864	-0.0014408	536.3242599258183	42.029	0.39182	42.443	42.274	42.666	0.4139					20	9	3	0	0	0	0.4196	1	3753	3753		24.203	8.8696	1	343360			6193	2646	4307	4313	6997	6997					0.10240550562321005
EIAQTHYY	8	Unmodified	_EIAQTHYY_					0	0	0		nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.2930297851562	2	512.740357	1023.46616	0.073595	3.7735E-05	0.16651	8.5375E-05	0.2401	0.00012311	512.7402743189128	53.678	0.62815	54.263	53.998	54.626	0.58474					23	14	2	0	0	0	0.4196	1	5463	5463		17.365	0	1	300400			6194	2532	4308	4314	6998	6998					-0.04463395861853314
EIATQKSRL	9	Unmodified	_EIATQKSRL_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3033447265625	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.77696	1	8682	8682		31.53	3.2755	1	9288900			6195	5201	4309	4315	6999	6999					0.07224530363282611
EICIALILAS	10	Unmodified	_EICIALILAS_					0	0	0		nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3;ENST00000526574.1_1_11:68334490-68338573:+|nuORF	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.301736	1044.58892	-0.83282	-0.00043582	4.2992	0.0022498	3.4663	0.0018139	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.77314	1	8419	8419		40.778	1.5253	1	2778600			6196	2507	4310	4316	7000	7000					0.06840724545213561
EIDECWSQP	9	Unmodified	_EIDECWSQP_					0	0	0		ENST00000475659.1_1_1:197237491-197326220:+|nuORF;nc|ENSG00000134376|P82279-5|CRB1;nc|ENSG00000134376|P82279-2|CRB1;ENSG00000134376|ENST00000367400|CRB1	ENST00000475659.1_1_1:197237491-197326220:+|nuORF	ENST00000475659.1_1_1:197237491-197326220:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.762451171875	2	553.726589	1105.43863	-0.69076	-0.00038249	-2.564	-0.0014197	-3.2547	-0.0018022	553.7249760411465	45.482	0.55938	46.378	46.088	46.647	0.89542					30	13	3	0	0	0	0.20789	1	4271	4271		15.642	0	1	760810			6197	3932	4311	4317	7001	7001					-0.10987667184394923
EIDEQRKTKP	10	Unmodified	_EIDEQRKTKP_					0	0	0		nc|ENSG00000168813|Q8TCN5-2|ZNF507;ENSG00000168813|ENST00000355898|ZNF507	nc|ENSG00000168813|Q8TCN5-2|ZNF507	nc|ENSG00000168813|Q8TCN5-2|ZNF507	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2254333496094	3	415.226215	1242.65681	0.41183	0.000171	-1.4503	-0.00060222	-1.0385	-0.00043122	415.2251511443373	26.925	1.2936	26.749	26.16	27.453	-0.17559					72	28	5	0	0	0	0.81117	1	1529	1529		38.754	5.7142	1	774990			6198	6440	4312	4318	7002	7002					0.04519265729572908
EIDEQRKTKP	10	Unmodified	_EIDEQRKTKP_					0	0	0		nc|ENSG00000168813|Q8TCN5-2|ZNF507;ENSG00000168813|ENST00000355898|ZNF507	nc|ENSG00000168813|Q8TCN5-2|ZNF507	nc|ENSG00000168813|Q8TCN5-2|ZNF507	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.2255859375	3	415.226215	1242.65681	1.8471	0.00076696	-2.9213	-0.001213	-1.0742	-0.00044604	415.2246933890348	26.889	0.89677	26.548	26.096	26.992	-0.34035					67	19	6	0	0	0	0.71918	2	1520	1520;1532		43.651	4.9367	1	829090			6199	6440	4312	4318	7003;7004	7003					0.04519265729572908
EIDGLLGNKPH	11	Unmodified	_EIDGLLGNKPH_					0	0	0		ENST00000572275.1_1_17:7826422-7827118:-|nuORF;ENSG00000170049|ENST00000303790|KCNAB3	ENST00000572275.1_1_17:7826422-7827118:-|nuORF	ENST00000572275.1_1_17:7826422-7827118:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.8192138671875	2	596.81967	1191.62479	-1.5654	-0.00093426	2.0611	0.0012301	0.49572	0.00029585	596.8202575531822	32.726	0.4758	32.725	32.536	33.012	-0.0016365					19	11	3	0	0	0	0.70737	1	1894	1894		30.318	2.2362	1	70082			6200	6556	4313	4319	7005	7005					0.03663898046443137
EIDLSFTFK	9	Unmodified	_EIDLSFTFK_					0	0	0			REV__ENSG00000148358|ENST00000347136|GPR107	REV__ENSG00000148358|ENST00000347136|GPR107	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.2872314453125	2	550.28714	1098.55973	-1.427	-0.00078524	1.9022	0.0010468	0.47525	0.00026153	550.2880047829314	90.476	0.88142	90.947	90.601	91.483	0.47068					54	21	3	0	0	0	0.6204	1	10746	10746		45.972	1.8554	1	2247600	+		6201	20113	4314	4320	7006	7006					0.01438903520556778
EIDQEQVDFEQ	11	Unmodified	_EIDQEQVDFEQ_					0	0	0			REV__ENSG00000104419|ENST00000323851|NDRG1	REV__ENSG00000104419|ENST00000323851|NDRG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.5363464355469	3	460.536895	1378.58885	-0.029902	-1.3771E-05	-2.4891	-0.0011463	-2.519	-0.0011601	460.53576513272907	30.718	0.56711	30.722	30.404	30.971	0.0037212					34	12	4	0	0	0	0.70278	1	2050	2050		31.068	2.4914	1	711380	+		6202	17457	4315	4321	7007	7007					-0.08529648711737536
EIDQIINPY	9	Unmodified	_EIDQIINPY_					0	0	0			REV__ENST00000393804.2_1_21:33000391-33000574:-|nuORF	REV__ENST00000393804.2_1_21:33000391-33000574:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7839965820312	2	552.782222	1103.54989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.166	1	74.724	74.224	75.224	0.55891								0	0	0	0.42198	1	8380	8380		57.811	3.0889	1		+		6203	26065	4316	4322	7008	7008					0.0022571551519376953
EIDTTAAS	8	Unmodified	_EIDTTAAS_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5748596191406	2	404.190165	806.365778	-1.8226	-0.00073669	-3.0883	-0.0012483	-4.911	-0.001985	404.1887297480779	83.438	0.5212	83.603	83.319	83.84	0.1651					21	11	2	0	0	0	0.4196	1	8046	8046		12.207	0	1	124370	+		6204	22442	4317	4323	7009	7009					-0.04515052915519391
EIDVLIFKKL	10	Unmodified	_EIDVLIFKKL_					0	0	0		ENSG00000175707|ENST00000320567|KDF1	ENSG00000175707|ENST00000320567|KDF1	ENSG00000175707|ENST00000320567|KDF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.5875244140625	3	406.588313	1216.74311	0.5758	0.00023411	-2.1697	-0.00088218	-1.5939	-0.00064807	406.5873508642622	24.247	1.5285	24.302	23.869	25.398	0.055485					100	43	4	0	0	0	0.86698	1	875	875		28.081	2.9555	1	404210			6205	7030	4318	4324	7010	7010					0.14340877302220179
EIEDFRLRPQS	11	Unmodified	_EIEDFRLRPQS_					0	0	0		ENST00000554233.1_1_14:76524934-76525784:+|nuORF;nc|ENSG00000119650|Q96FT9-3|IFT43;ENST00000554026.5_1_14:76452129-76542971:+|nuORF;ENST00000555305.5_1_14:76452129-76548711:+|nuORF;ENSG00000119650|ENST00000314067|IFT43	ENST00000554233.1_1_14:76524934-76525784:+|nuORF	ENST00000554233.1_1_14:76524934-76525784:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.80108642578125	3	463.908886	1388.70483	-2.0418	-0.00094721	1.4309	0.00066383	-0.61086	-0.00028339	464.243392661089	42.662	0.20667	43.359	43.257	43.463	0.69754					6	4	2	0	0	0	0.17521	1	3837	3837		17.167	9.8254	1	105230			6206	3082	4319	4325	7011	7011					0.026023396496157147
EIEELQQCLL	10	Unmodified	_EIEELQQCLL_					0	0	0		nc|ENSG00000106665|Q9UDT6-2|CLIP2;ENSG00000106665|ENST00000223398|CLIP2	nc|ENSG00000106665|Q9UDT6-2|CLIP2	nc|ENSG00000106665|Q9UDT6-2|CLIP2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.7852783203125	3	406.540923	1216.60094	-2.0173	-0.00082011	-2.2811	-0.00092734	-4.2984	-0.0017475	406.5398746659545	30.732	0.61575	30.732	30.476	31.091	0					44	22	3	0	0	0	0.37624	1	1454	1454		20.837	0	1	133450			6207	2311	4320	4326	7012	7012					0.0013029649774125573
EIEESVII	8	Unmodified	_EIEESVII_					0	0	0			REV__ENST00000524817.5_1_11:9685687-9762009:+|nuORF	REV__ENST00000524817.5_1_11:9685687-9762009:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2562561035156	2	466.252766	930.490978	-1.4812	-0.00069062	4.298	0.0020039	2.8168	0.0013133	466.2546647596287	63.114	1.6104	63.114	62.32	63.93	0					124	75	2	0	0	0	0.86791	1	5552	5552		28.254	2.8041	1	225480	+		6208	19095	4321	4327	7013	7013					0.02295239220870826
EIEGVYSGF	9	Unmodified	_EIEGVYSGF_					0	0	0		ENSG00000249715|ENST00000624922|FER1L5	ENSG00000249715|ENST00000624922|FER1L5	ENSG00000249715|ENST00000624922|FER1L5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.734619140625	2	500.73474	999.454927	-0.75441	-0.00037776	0.7896	0.00039538	0.03519	1.7621E-05	500.73497410707057	80.886	0.73222	81.307	80.933	81.666	0.42149					37	17	3	0	0	0	0.43338	1	9330	9330		55.504	7.5886	1	473340			6209	8839	4322	4328	7014	7014					-0.04482217955990109
EIEKRESMFVF	11	Unmodified	_EIEKRESMFVF_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2380065917969	3	472.239355	1413.69624	-0.27444	-0.0001296	0.15212	7.1836E-05	-0.12232	-5.7766E-05	472.239438281829	26.798	1.4188	26.759	26.096	27.515	-0.038523					50	32	3	0	0	0	0.62914	1	1231	1231		41.08	12.503	1	131550			6210	1444	4323	4329	7015	7015					0.005936496887670728
EIEKRESMFVF	11	Unmodified	_EIEKRESMFVF_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	472.239355	1413.69624	-1.0459	-0.00049389	2.0655	0.00097539	1.0196	0.0004815	472.2404928792026	26.922	0.2352	26.989	26.856	27.091	0.066877	0.045537	0.0030503	NaN	41.08	12	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42406			6211	1444	4323	4329							0.005936496887670728
EIEKRESMFVF	11	Unmodified	_EIEKRESMFVF_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	472.239355	1413.69624	-0.3237	-0.00015286	-0.19424	-9.1728E-05	-0.51794	-0.00024459	472.23916049539474	27.269	0.39833	27.093	26.926	27.324	-0.17559	0.14952	-0.00015104	NaN	41.08	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110510			6212	1444	4323	4329							0.005936496887670728
EIEKRESMFVF	11	Unmodified	_EIEKRESMFVF_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	472.239355	1413.69624	0.82189	0.00038813	-1.0715	-0.000506	-0.24961	-0.00011788	472.2388366283608	27.304	0.34069	27.049	26.855	27.196	-0.25465	0.10564	-0.0013939	NaN	41.08	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162850			6213	1444	4323	4329							0.005936496887670728
EIEKYFNLVN	10	Unmodified	_EIEKYFNLVN_					0	0	0			REV__ENSG00000150760|ENST00000623213|DOCK1	REV__ENSG00000150760|ENST00000623213|DOCK1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.904541015625	2	634.829703	1267.64485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.776	1	15.834	15.334	16.334	0.057872								0	0	0	0.45132	1	74	74		39.253	5.3312	1		+		6214	20220	4324	4330	7016	7016					0.021736489863769748
EIELKLKFN	9	Unmodified	_EIELKLKFN_					0	0	0		ENST00000565884.5_1_16:20817227-20817407:-|nuORF	ENST00000565884.5_1_16:20817227-20817407:-|nuORF	ENST00000565884.5_1_16:20817227-20817407:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3295288085938	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.76764	1	11194	11194		34.173	1.3601	1	6007000			6215	13925	4325	4331	7017	7017					0.0881915819995811
EIELLLASCV	10	Unmodified	_EIELLLASCV_					0	0	0			REV__ENSG00000276231|ENST00000619866|PIK3R6	REV__ENSG00000276231|ENST00000619866|PIK3R6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.31689453125	2	545.29665	1088.57875	0.74935	0.00040862	-1.4525	-0.00079205	-0.70316	-0.00038343	545.7959179627707	90.059	1.0724	90.212	89.397	90.47	0.15269					34	24	2	0	0	0	0.37624	1	8966	8966		42.396	14.514	1	95436	+		6216	24017	4326	4332	7018	7018					0.03800116819957111
EIELLLASCV	10	Unmodified	_EIELLLASCV_					0	0	0			REV__ENSG00000276231|ENST00000619866|PIK3R6	REV__ENSG00000276231|ENST00000619866|PIK3R6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.316650390625	2	545.29665	1088.57875	0.75502	0.00041171	-2.8357	-0.0015463	-2.0806	-0.0011346	545.7987521336573	90.418	0.85114	90.572	90.26	91.111	0.15388					32	20	2	0	0	0	0.37624	1	9061	9061		44.117	0	1	215250	+		6217	24017	4326	4332	7019	7019					0.03800116819957111
EIERGFEG	8	Unmodified	_EIERGFEG_					0	0	0		nc|ENSG00000143434|Q9H3T2-2|SEMA6C;ENSG00000143434|ENST00000368914|SEMA6C;nc|ENSG00000143434|Q9H3T2-3|SEMA6C	nc|ENSG00000143434|Q9H3T2-2|SEMA6C	nc|ENSG00000143434|Q9H3T2-2|SEMA6C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7234191894531	2	468.724707	935.43486	0.80556	0.00037759	-3.8272	-0.0017939	-3.0216	-0.0014163	468.7228502568121	90.007	1.4889	90.457	90.184	91.673	0.45058					91	38	4	0	0	0	0.884	1	10675	10675		33.516	5.2613	1	5665600			6218	4630	4327	4333	7020	7020					-0.035439688959286286
EIESVFHIEL	10	Unmodified	_EIESVFHIEL_					0	0	0		ENSG00000189139|ENST00000340446|FSCB	ENSG00000189139|ENST00000340446|FSCB	ENSG00000189139|ENST00000340446|FSCB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	607.43994140625	2	608.316428	1214.6183	0.40376	0.00024562	-0.82569	-0.00050228	-0.42193	-0.00025666	608.315999636958	94.891	0.23962	95.311	95.231	95.471	0.41964					6	5	2	0	0	0	0.37624	1	11382	11382		32.812	0	1	45545			6219	7993	4328	4334	7021	7021					0.01957960095069211
EIEVKNTYAED	11	Unmodified	_EIEVKNTYAED_					0	0	0			REV__ENST00000430398.2_1_1:73570714-73571443:+|nuORF	REV__ENST00000430398.2_1_1:73570714-73571443:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26556396484375	3	437.541869	1309.60378	2.9166	0.0012761	3.5594	0.0015574	6.476	0.0028335	437.5432920810628	25.707	0.67088	25.276	25.026	25.697	-0.4311					34	15	4	0	0	0	0.1747	1	1356	1356		34.087	18.753	1	223500	+		6220	26603	4329	4335	7022	7022					-0.03864156843769706
EIFIAVRRPVL	11	Unmodified	_EIFIAVRRPVL_					0	0	0			REV__ENSG00000179051|ENST00000375436|RCC2	REV__ENSG00000179051|ENST00000375436|RCC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.27288818359375	3	438.27484	1311.80269	-0.96199	-0.00042161	-3.3249	-0.0014572	-4.2869	-0.0018788	438.2732841967114	107.57	0.99143	107.57	106.84	107.83	0					91	23	5	0	0	0	0.74771	1	11139	11139		22.562	4.7284	1	3871200	+		6221	22311	4330	4336	7023	7023					0.15926193036261793
EIFIVIRSLYT	11	Unmodified	_EIFIVIRSLYT_					0	0	0			REV__ENSG00000139679|ENST00000620633|LPAR6	REV__ENSG00000139679|ENST00000620633|LPAR6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9324951171875	3	451.930739	1352.77039	2.5866	0.001169	1.6869	0.00076237	4.2735	0.0019313	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.75457	1	11022	11022		21.032	0.19508	1	1152500	+		6222	19560	4331	4337	7024	7024					0.1081136084260379
EIFSVVAD	8	Unmodified	_EIFSVVAD_					0	0	0			REV__ENSG00000072364|ENST00000265343|AFF4	REV__ENSG00000072364|ENST00000265343|AFF4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.2518615722656	2	440.226551	878.438549	1.9443	0.00085591	0.68149	0.00030001	2.6258	0.0011559	440.22686616187605	90.314	1.1779	90.36	89.612	90.79	0.04644					30	27	2	0	0	0	0.4196	1	9393	9393		6.7355	0	1	65654	+		6223	16645	4332	4338	7025	7025					-0.005532991220889016
EIFTKVLG	8	Unmodified	_EIFTKVLG_					0	0	0			REV__ENSG00000023171|ENST00000635736|GRAMD1B	REV__ENSG00000023171|ENST00000635736|GRAMD1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.7658996582031	2	453.768386	905.522219	-1.2895	-0.00058512	-3.8536	-0.0017487	-5.1431	-0.0023338	453.7664319671317	42.031	1.3122	42.035	41.619	42.931	0.0043983					83	36	3	0	0	0	0.89494	1	2766	2766		37.159	3.6435	1	708440	+		6224	16246	4333	4339	7026	7026					0.0656785704561571
EIGELRRAI	9	Unmodified	_EIGELRRAI_					0	0	0			REV__nc|ENSG00000197321|O95425-4|SVIL	REV__nc|ENSG00000197321|O95425-4|SVIL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.2974853515625	2	528.811648	1055.60874	0.06662	3.5229E-05	-2.0235	-0.0010701	-1.9569	-0.0010348	528.8086708293997	58.725	0.25257	59.279	59.047	59.3	0.55323					7	5	2	0	0	0	0.20789	1	6166	6166		39.253	21.888	1	187890	+		6225	23219	4334	4340	7027	7027					0.08316236600194316
EIGLKLYLSK	10	Unmodified	_EIGLKLYLSK_					0	0	0			REV__nc|ENSG00000197653|Q8IVF4|DNAH10	REV__nc|ENSG00000197653|Q8IVF4|DNAH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3532104492188	2	582.355357	1162.69616	0.16989	9.8934E-05	-3.1776	-0.0018505	-3.0077	-0.0017515	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.8651	1	12645	12645		25.574	4.6271	1	635410	+		6226	23257	4335	4341	7028	7028					0.1213201775105972
EIGNAKRRRNV	11	Unmodified	_EIGNAKRRRNV_					0	0	0			REV__ENST00000252674.8_2_19:6210599-6210812:-|nuORF	REV__ENST00000252674.8_2_19:6210599-6210812:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.5858459472656	3	438.256731	1311.74836	-1.1877	-0.00052053	4.1887	0.0018357	3.001	0.0013152	438.2582166388894	30.972	0.96618	31.052	30.678	31.644	0.079834					44	21	3	0	0	0	0.17536	1	2138	2138		32.034	12.004	1	362320	+		6227	24293	4336	4342	7029	7029					0.10495993937411185
EIGNVLLNQK	10	Unmodified	_EIGNVLLNQK_					0	0	0		ENST00000313334.12_1_1:52553412-52553559:+|nuORF	ENST00000313334.12_1_1:52553412-52553559:+|nuORF	ENST00000313334.12_1_1:52553412-52553559:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.32275390625	2	564.324588	1126.63462	0.85504	0.00048252	-3.1434	-0.0017739	-2.2883	-0.0012914	564.3227484395347	16.363	0.50572	15.764	15.555	16.06	-0.59873					26	10	4	0	0	0	0.86587	1	136	136		29.17	1.2878	1	893940			6228	9948	4337	4343	7030	7030					0.07637086051818187
EIGQSPLLL	9	Unmodified	_EIGQSPLLL_					0	0	0			REV__ENST00000256079.8_1_12:30782134-30782350:-|nuORF	REV__ENST00000256079.8_1_12:30782134-30782350:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2835998535156	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.47	1	74.602	74.102	75.102	0.13208								0	0	0	0.29134	1	6889	6889		34.173	6.2903	1		+		6229	24322	4338	4344	7031	7031					0.06871224728774905
EIGRYKAR	8	Unmodified	_EIGRYKAR_					0	0	0			REV__ENSG00000130827|ENST00000369682|PLXNA3	REV__ENSG00000130827|ENST00000369682|PLXNA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.2672119140625	2	496.785433	991.556313	0.91342	0.00045377	-0.81102	-0.0004029	0.1024	5.0871E-05	496.78488172328093	27.908	0.44212	27.654	27.411	27.853	-0.25465					14	9	2	0	0	0	0.4196	1	1632	1632		30.504	5.9844	1	75693	+		6230	18914	4339	4345	7032	7032					0.06019698257227901
EIGSVTPK	8	Unmodified	_EIGSVTPK_					0	0	0		ENST00000573843.1_1_16:72048353-72049628:+|nuORF;ENST00000572003.5_1_16:72048341-72054317:+|nuORF;ENST00000573922.5_1_16:72046155-72057137:+|nuORF;ENSG00000102967|ENST00000219240|DHODH	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.22576904296875	2	415.734543	829.454533	1.8144	0.00075432	-1.3464	-0.00055975	0.46801	0.00019457	415.73371229645034	26.968	0.57981	26.627	26.368	26.948	-0.34035					15	12	2	0	0	0	0.4196	1	1545	1545		25.45	2.4077	1	84054			6231	2037	4340	4346	7033	7033					0.032984071148121075
EIGSVTPK	8	Unmodified	_EIGSVTPK_					0	0	0		ENST00000573843.1_1_16:72048353-72049628:+|nuORF;ENST00000572003.5_1_16:72048341-72054317:+|nuORF;ENST00000573922.5_1_16:72046155-72057137:+|nuORF;ENSG00000102967|ENST00000219240|DHODH	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	415.734543	829.454533	0.4439	0.00018454	0.36254	0.00015072	0.80643	0.00033526	415.7345851072747	26.306	0.77441	26.351	25.931	26.705	0.045509	-0.099501	-9.85E-05	NaN	25.45	33	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62352			6232	2037	4340	4346							0.032984071148121075
EIGSVTPK	8	Unmodified	_EIGSVTPK_					0	0	0		ENST00000573843.1_1_16:72048353-72049628:+|nuORF;ENST00000572003.5_1_16:72048341-72054317:+|nuORF;ENST00000573922.5_1_16:72046155-72057137:+|nuORF;ENSG00000102967|ENST00000219240|DHODH	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	415.734543	829.454533	-0.36119	-0.00015016	1.1987	0.00049836	0.83756	0.0003482	415.73488198770207	26.453	0.71161	26.414	26.053	26.765	-0.038525	-0.036571	0.00059678	NaN	25.45	28	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96920			6233	2037	4340	4346							0.032984071148121075
EIGSVTPK	8	Unmodified	_EIGSVTPK_					0	0	0		ENST00000573843.1_1_16:72048353-72049628:+|nuORF;ENST00000572003.5_1_16:72048341-72054317:+|nuORF;ENST00000573922.5_1_16:72046155-72057137:+|nuORF;ENSG00000102967|ENST00000219240|DHODH	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	415.734543	829.454533	2.79	0.0011599	-2.0246	-0.00084171	0.76541	0.00031821	415.73356447874545	26.508	0.74053	26.476	26.1	26.84	-0.032125	0.025652	-0.0020834	NaN	25.45	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90660			6234	2037	4340	4346							0.032984071148121075
EIGSVTPK	8	Unmodified	_EIGSVTPK_					0	0	0		ENST00000573843.1_1_16:72048353-72049628:+|nuORF;ENST00000572003.5_1_16:72048341-72054317:+|nuORF;ENST00000573922.5_1_16:72046155-72057137:+|nuORF;ENSG00000102967|ENST00000219240|DHODH	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	415.734543	829.454533	-1.9206	-0.00079846	2.1533	0.00089519	0.23268	9.6731E-05	415.7354131816599	26.485	0.62978	26.552	26.251	26.881	0.066877	0.1015	0.0013904	NaN	25.45	68	29	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	155350			6235	2037	4340	4346							0.032984071148121075
EIGSVTPK	8	Unmodified	_EIGSVTPK_					0	0	0		ENST00000573843.1_1_16:72048353-72049628:+|nuORF;ENST00000572003.5_1_16:72048341-72054317:+|nuORF;ENST00000573922.5_1_16:72046155-72057137:+|nuORF;ENSG00000102967|ENST00000219240|DHODH	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	ENST00000573843.1_1_16:72048353-72049628:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	415.734543	829.454533	0.29501	0.00012265	0.23695	9.8507E-05	0.53196	0.00022115	415.73448621874144	26.255	0.72062	26.283	25.805	26.526	0.02817	-0.16778	-0.00020292	NaN	25.45	55	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191290			6236	2037	4340	4346							0.032984071148121075
EIGTLLHDLF	10	Unmodified	_EIGTLLHDLF_					0	0	0			REV__ENST00000374089.5_1_1:27426800-27429818:-|nuORF	REV__ENST00000374089.5_1_1:27426800-27429818:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.3120727539062	2	579.313689	1156.61282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.9	1	109.87	109.37	110.37	-0.027641								0	0	0	0.45132	1	12159	12159		32.812	6.0163	1		+		6237	16980	4341	4347	7034	7034					0.040782813032365084
EIHRHLGV	8	Unmodified	_EIHRHLGV_					0	0	0		ENST00000536995.5_1_11:72537753-72538071:+|nuORF	ENST00000536995.5_1_11:72537753-72538071:+|nuORF	ENST00000536995.5_1_11:72537753-72538071:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.7703857421875	2	480.772326	959.530098	-0.0039102	-1.8799E-06	-1.3974	-0.00067183	-1.4013	-0.00067371	480.77150529803663	40.928	0.46882	40.882	40.674	41.143	-0.045471					33	18	2	0	0	0	0.91977	1	2625	2625		45.952	8.9235	1	279370			6238	13446	4342	4348	7035	7035					0.04871429085756063
EIHRQVTP	8	Unmodified	_EIHRQVTP_					0	0	0		ENST00000472842.1_1_11:13397253-13400122:+|nuORF	ENST00000472842.1_1_11:13397253-13400122:+|nuORF	ENST00000472842.1_1_11:13397253-13400122:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	490.2657165527344	2	490.269616	978.524678	-1.0359	-0.00050789	-1.4324	-0.00070225	-2.4683	-0.0012101	490.26894349416415	84.446	2.9711	84.446	83.546	86.517	0					137	69	2	0	0	0	0.84634	2	8096	8084;8096		60.294	9.6267	1	202680			6239	12272	4343	4349	7036;7037	7037					0.03455705503279205
EIIDKHLFPP	10	Unmodified	_EIIDKHLFPP_					0	0	0			REV__ENSG00000133958|ENST00000695012|UNC79	REV__ENSG00000133958|ENST00000695012|UNC79	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57476806640625	3	403.560646	1207.66011	-0.07686	-3.1018E-05	2.9967	0.0012094	2.9198	0.0011783	403.5620119554234	82.794	0.24568	83.268	83.13	83.376	0.47383					7	5	2	0	0	0	0.37624	1	9635	9635		11.636	0	1	42590	+		6240	19104	4344	4350	7038	7038					0.06458560574242256
EIIEDPRGYK	10	Unmodified	_EIIEDPRGYK_					0	0	0			REV__ENSG00000148225|ENST00000374193|WDR31	REV__ENSG00000148225|ENST00000374193|WDR31	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7853698730469	3	407.215427	1218.62445	0.13332	5.429E-05	-0.22459	-9.1457E-05	-0.091271	-3.7167E-05	407.21537595017537	31.047	0.77615	31.051	30.753	31.529	0.0037212					22	17	2	0	0	0	0.37624	1	2114	2114		20.837	0	1	92929	+		6241	20104	4345	4351	7039	7039					0.02388478326565746
EIIHGDIKP	9	Unmodified	_EIIHGDIKP_					0	0	0		ENSG00000169679|ENST00000302759|BUB1;nc|ENSG00000169679|O43683-3|BUB1	ENSG00000169679|ENST00000302759|BUB1	ENSG00000169679|ENST00000302759|BUB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2860412597656	2	511.287474	1020.5604	-0.92708	-0.000474	-0.33784	-0.00017274	-1.2649	-0.00064674	511.2872429876972	41.91	2.375	41.872	41.45	43.825	-0.038223					133	56	5	0	0	0	0.69624	1	3314	3314		40.778	5.1599	1	7049200			6242	6515	4346	4352	7040	7040					0.05093742960286818
EIIHGDIKP	9	Unmodified	_EIIHGDIKP_					0	0	0		ENSG00000169679|ENST00000302759|BUB1;nc|ENSG00000169679|O43683-3|BUB1	ENSG00000169679|ENST00000302759|BUB1	ENSG00000169679|ENST00000302759|BUB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.2859802246094	2	511.287474	1020.5604	0.28253	0.00014445	-1.1271	-0.00057627	-0.84457	-0.00043182	511.2867408773945	41.845	0.72731	41.919	41.584	42.312	0.073418					40	17	3	0	0	0	0.55097	1	2752	2752		49.442	1.7842	1	605380			6243	6515	4346	4352	7041	7041					0.05093742960286818
EIIIQKDKAIV	11	Unmodified	_EIIIQKDKAIV_					0	0	0		nc|ENSG00000261371|P16284-5|PECAM1;nc|ENSG00000261371|P16284-3|PECAM1;nc|ENSG00000261371|P16284-4|PECAM1;nc|ENSG00000261371|P16284-2|PECAM1;nc|ENSG00000261371|P16284-6|PECAM1;ENSG00000261371|ENST00000563924|PECAM1	nc|ENSG00000261371|P16284-5|PECAM1	nc|ENSG00000261371|P16284-5|PECAM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.25030517578125	3	423.930739	1268.77039	2.7168	0.0011518	1.0018	0.00042468	3.7186	0.0015764	423.9313835907769	107.32	0.66556	107.29	107.1	107.77	-0.034134					20	15	2	0	0	0	0.1729	1	11871	11871		5.4129	0	1	158460			6244	8925	4347	4353	7042	7042					0.14675360842602458
EIILIFRVGKR	11	Unmodified	_EIILIFRVGKR_					0	0	0		ENST00000400011.6_1_15:30065481-30065544:-|nuORF	ENST00000400011.6_1_15:30065481-30065544:-|nuORF	ENST00000400011.6_1_15:30065481-30065544:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.62432861328125	3	448.62224	1342.84489	-1.3317	-0.00059743	1.4669	0.00065806	0.13514	6.0629E-05	448.6226582511657	65.408	0.17323	65.533	65.42	65.593	0.12545					8	6	2	0	0	0	0.77205	1	5794	5794		17.167	2.4731	1	99220			6245	11217	4348	4354	7043	7043					0.1871816844463865
EIILIVQV	8	Unmodified	_EIILIVQV_					0	0	0		ENST00000456360.5_1_Y:23556925-23559248:-|nuORF	ENST00000456360.5_1_Y:23556925-23559248:-|nuORF	ENST00000456360.5_1_Y:23556925-23559248:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8012390136719	2	463.799686	925.584819	-1.1343	-0.00052608	3.785	0.0017555	2.6507	0.0012294	463.8012667988253	46.183	0.63174	46.199	45.791	46.422	0.015514					31	18	2	0	0	0	0.81548	1	3343	3343		20.482	1.1219	1	155340			6246	11967	4349	4355	7044	7044					0.11905003113804469
EIILSLQKTKH	11	Unmodified	_EIILSLQKTKH_					0	0	0		nc|ENSG00000134028|O15204-2|ADAMDEC1;ENSG00000134028|ENST00000256412|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2679443359375	3	437.266122	1308.77654	-0.59734	-0.0002612	4.3837	0.0019168	3.7863	0.0016556	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.72892	1	4326	4326		26.75	1.6819	1	2564600			6247	3907	4350	4356	7045	7045					0.13449879074119053
EIIPLDSG	8	Unmodified	_EIIPLDSG_					0	0	0			REV__ENSG00000198825|ENST00000650623|INPP5F	REV__ENSG00000198825|ENST00000650623|INPP5F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2283630371094	2	422.226551	842.438549	0.38076	0.00016076	2.353	0.0009935	2.7338	0.0011543	422.22752903910396	61.401	1.1417	61.52	61.387	62.529	0.11901					70	54	2	0	0	0	0.884	1	5369	5369		33.516	0	1	712460	+		6248	23389	4351	4357	7046	7046					0.011027008779137759
EIISLLEEQLP	11	Unmodified	_EIISLLEEQLP_					0	0	0		ENSG00000182606|ENST00000327628|TRAK1	ENSG00000182606|ENST00000327628|TRAK1	ENSG00000182606|ENST00000327628|TRAK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3610229492188	2	642.358293	1282.70203	2.6974	0.0017327	3.1005	0.0019916	5.7979	0.0037243	642.359695370679	114.18	2.3126	114.16	113.46	115.77	-0.024452					163	86	2	0	0	0	0.68532	1	12709	12709		33.922	5.8401	1	464940			6249	7464	4352	4358	7047	7047					0.07199071472109608
EIITKKFRRIL	11	Unmodified	_EIITKKFRRIL_					0	0	0			REV__ENSG00000180815|ENST00000338883|MAP3K15	REV__ENSG00000180815|ENST00000338883|MAP3K15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.97076416015625	3	472.973161	1415.89765	-1.6394	-0.00077538	-2.945	-0.0013929	-4.5844	-0.0021683	472.9717127008119	49.434	3.3366	49.434	48.538	51.875	0					243	82	4	0	0	0	0.77205	3	3865	3854;3865;3876		17.167	3.7457	1	1017000	+		6250	22418	4353	4359	7048;7049;7050	7049					0.2063412650745704
EIITKKFRRIL	11	Unmodified	_EIITKKFRRIL_					0	0	0			REV__ENSG00000180815|ENST00000338883|MAP3K15	REV__ENSG00000180815|ENST00000338883|MAP3K15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.9708251953125	3	472.973161	1415.89765	-0.95095	-0.00044977	-3.7122	-0.0017558	-4.6632	-0.0022056	472.971385713144	49.546	3.8081	49.55	48.972	52.78	0.0035973					232	95	4	0	0	0	0.77205	1	4185	4185		17.167	3.6588	1	1400600	+		6251	22418	4353	4359	7051	7051					0.2063412650745704
EIITKKFRRIL	11	Unmodified	_EIITKKFRRIL_					0	0	0			REV__ENSG00000180815|ENST00000338883|MAP3K15	REV__ENSG00000180815|ENST00000338883|MAP3K15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.9706726074219	3	472.973161	1415.89765	-1.5017	-0.00071026	-3.3636	-0.0015909	-4.8653	-0.0023012	472.97146844681254	45.906	1.1209	46.801	46.327	47.448	0.89542					102	27	5	0	0	0	0.7896	1	4328	4328		13.508	0.55046	1	9488500	+		6252	22418	4353	4359	7052	7052					0.2063412650745704
EIITKYVYE	9	Unmodified	_EIITKYVYE_					0	0	0		ENST00000504768.2_1_5:93246475-93410459:-|nuORF;nc|ENSG00000113391|Q8WUF8-2|ARB2A;ENST00000506398.6_1_5:93217085-93410459:-|nuORF;nc|ENSG00000113391|Q8WUF8-4|ARB2A;nc|ENSG00000113391|Q8WUF8-3|ARB2A;ENSG00000113391|ENST00000395965|FAM172A	ENST00000504768.2_1_5:93246475-93410459:-|nuORF	ENST00000504768.2_1_5:93246475-93410459:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	578.3209228515625	2	579.308072	1156.60159	0.50602	0.00029314	-0.99359	-0.00057559	-0.48757	-0.00028245	579.3065966821614	92.137	1.4778	92.182	91.68	93.158	0.045448					65	34	3	0	0	0	0.20789	1	9633	9633		24.203	0	1	63670			6253	2722	4354	4360	7053	7053					0.02955459209078981
EIIVFSCGHLY	11	Unmodified	_EIIVFSCGHLY_					0	0	0		nc|ENSG00000156931|Q8N3P4-2|VPS8;nc|ENSG00000156931|Q8N3P4-3|VPS8;ENSG00000156931|ENST00000625842|VPS8;ENST00000492449.5_1_3:184603882-184769810:+|nuORF	nc|ENSG00000156931|Q8N3P4-2|VPS8	nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.8245239257812	2	640.820824	1279.62709	1.1324	0.00072567	3.7857	0.002426	4.9181	0.0031516	640.8231653406368	90.386	1.814	90.837	90.412	92.226	0.45058					147	43	6	0	0	0	0.33869	1	10656	10656		64.207	0.7808	1	25148000			6254	5402	4355	4361	7054	7054					-0.0015338954012804606
EIIVLILN	8	Unmodified	_EIIVLILN_					0	0	0			REV__ENSG00000184345|ENST00000333127|IQCF2	REV__ENSG00000184345|ENST00000333127|IQCF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80023193359375	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.83058	1	2985	2985		12.959	0	1	890090	+		6255	22665	4356	4362	7055	7055					0.11905003113815837
EIIVLILN	8	Unmodified	_EIIVLILN_					0	0	0			REV__ENSG00000184345|ENST00000333127|IQCF2	REV__ENSG00000184345|ENST00000333127|IQCF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.79986572265625	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.86906	1	3426	3426		8.2313	0	1	1516700	+		6256	22665	4356	4362	7056	7056					0.11905003113815837
EIKAIYKKN	9	Unmodified	_EIKAIYKKN_					0	0	0			REV__chr12:18143293-18198401|18|114.39|0.0|23.45|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|98	REV__chr12:18143293-18198401|18|114.39|0.0|23.45|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|98	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.830078125	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.76764	1	8552	8552		34.173	5.023	1	1181400	+		6257	15526	4357	4363	7057	7057					0.10094577919812764
EIKAPIKPKL	10	Unmodified	_EIKAPIKPKL_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8533325195312	2	568.873717	1135.73288	-1.1636	-0.00066192	-3.88	-0.0022072	-5.0436	-0.0028692	568.8722480589199	102.4	0.56344	102.42	102.24	102.8	0.01989					32	13	4	0	0	0	0.37624	1	10987	10987		39.253	5.0803	1	440990	+		6258	20437;29946	4358	4364	7058	7058					0.17044314367672087
EIKDIKLYSL	10	Unmodified	_EIKDIKLYSL_					0	0	0		nc|ENSG00000048707|Q5THJ4-2|VPS13D;ENSG00000048707|ENST00000620676|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.356201171875	2	611.358096	1220.70164	-0.40504	-0.00024762	-2.2662	-0.0013854	-2.6712	-0.0016331	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.86106	1	10137	10137		33.922	0	1	12417000			6259	977	4359	4365	7059	7059					0.10011696542892423
EIKDRKKDVK	10	Unmodified	_EIKDRKKDVK_					0	0	0			REV__nc|ENSG00000182901|P49802-4|RGS7	REV__nc|ENSG00000182901|P49802-4|RGS7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.59942626953125	3	420.254105	1257.74048	1.3531	0.00056863	-2.4375	-0.0010244	-1.0844	-0.00045572	420.25358263282436	23.762	0.67841	23.187	22.92	23.598	-0.57415					39	15	4	0	0	0	0.37624	1	1142	1142		22.562	0	1	130280	+		6260	15443	4360	4366	7060	7060					0.12192421897248096
EIKEKMKTV	9	Unmodified	_EIKEKMKTV_					0	0	0		ENST00000574137.1_1_16:10837720-10851732:+|nuORF;ENST00000571790.5_1_16:10837720-10857402:+|nuORF;nc|ENSG00000103274|P53384-2|NUBP1;ENSG00000103274|ENST00000283027|NUBP1	ENST00000574137.1_1_16:10837720-10851732:+|nuORF	ENST00000574137.1_1_16:10837720-10851732:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3323364257812	2	553.317917	1104.62128	-0.7498	-0.00041488	-4.4394	-0.0024564	-5.1892	-0.0028713	553.3150145827875	96.953	0.34905	97.016	96.95	97.299	0.062225					9	7	2	0	0	0	0.20789	1	10233	10233		19.997	0	1	53714			6261	2072	4361	4367	7061	7061					0.07315511948218045
EIKFFAKILL	10	Unmodified	_EIKFFAKILL_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3558959960938	2	611.383917	1220.75328	1.1394	0.00069663	0.84151	0.00051449	1.9809	0.0012111	611.3855903073531	95.522	0.16838	95.753	95.675	95.843	0.23103					5	3	2	0	0	0	0.37624	1	9814	9814		9.7057	0	1	67898			6262	8027	4362	4368	7062	7062					0.15173485027480638
EIKFKIKDSVF	11	Unmodified	_EIKFKIKDSVF_					0	0	0			REV__ENSG00000100426|ENST00000216268|ZBED4	REV__ENSG00000100426|ENST00000216268|ZBED4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9325256347656	3	451.930739	1352.77039	0.75363	0.00034059	3.5405	0.0016001	4.2942	0.0019407	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.74344	1	10539	10539		23.514	5.6812	1	952120	+		6263	17194	4363	4369	7063	7063					0.10811360842581053
EIKFKSRIR	9	Unmodified	_EIKFKSRIR_					0	0	0		ENST00000441284.5_2_13:46917522-46942212:-|nuORF;nc|ENSG00000102445|Q9H714-6|RUBCNL;nc|ENSG00000102445|Q9H714-3|RUBCNL;nc|ENSG00000102445|Q9H714-4|RUBCNL;ENSG00000102445|ENST00000429979|RUBCNL	ENST00000441284.5_2_13:46917522-46942212:-|nuORF	ENST00000441284.5_2_13:46917522-46942212:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.8636474609375	2	588.864215	1175.71388	0.17473	0.00010289	-1.2881	-0.00075854	-1.1134	-0.00065564	588.8633833440557	63.17	2.5545	63.724	62.007	64.561	0.55449					106	59	3	0	0	0	0.77696	1	6813	6813		31.53	2.3598	1	275840			6264	2004	4364	4370	7064	7064					0.13304777796611233
EIKFKSRIR	9	Unmodified	_EIKFKSRIR_					0	0	0		ENST00000441284.5_2_13:46917522-46942212:-|nuORF;nc|ENSG00000102445|Q9H714-6|RUBCNL;nc|ENSG00000102445|Q9H714-3|RUBCNL;nc|ENSG00000102445|Q9H714-4|RUBCNL;ENSG00000102445|ENST00000429979|RUBCNL	ENST00000441284.5_2_13:46917522-46942212:-|nuORF	ENST00000441284.5_2_13:46917522-46942212:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	588.864215	1175.71388	-1.1218	-0.00066057	-0.2345	-0.00013809	-1.3563	-0.00079865	588.8641031599972	63.412	1.5922	63.8	63.185	64.777	0.38779	0.037693	0.00047091	NaN	31.53	69	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299030			6265	2004	4364	4370							0.13304777796611233
EIKGIDGET	9	Unmodified	_EIKGIDGET_					0	0	0			REV__ENSG00000080200|ENST00000389622|CRYBG3	REV__ENSG00000080200|ENST00000389622|CRYBG3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.24371337890625	2	481.245472	960.476391	-1.9639	-0.00094514	2.3227	0.0011178	0.35876	0.00017265	481.2464659109781	24.432	0.7729	24.432	24.034	24.807	0					53	33	3	0	0	0	0.67345	1	847	847		42.396	1.618	1	66817	+		6266	16797	4365	4371	7065	7065					-0.005428329272717747
EIKGNVKR	8	Unmodified	_EIKGNVKR_					0	0	0		ENSG00000163092|ENST00000409195|XIRP2;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2878112792969	2	472.287808	942.561064	-0.97076	-0.00045848	0.82719	0.00039067	-0.14357	-6.7805E-05	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.85277	1	9459	9459		25.45	0	1	26024000			6267	5765	4366	4372	7066	7066					0.08748582400005489
EIKGNVKR	8	Unmodified	_EIKGNVKR_					0	0	0		ENSG00000163092|ENST00000409195|XIRP2;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2875671386719	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.8347	1	9808	9808		23.042	0	1	50946000			6268	5765	4366	4372	7067	7067					0.08748582400005489
EIKGRSLFL	9	Unmodified	_EIKGRSLFL_					0	0	0			REV__ENST00000382159.7_1_19:2514511-2514568:-|nuORF	REV__ENST00000382159.7_1_19:2514511-2514568:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.81689453125	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.76764	1	8413	8413		34.173	4.331	1	1422300	+		6269	25972	4367	4373	7068	7068					0.09498308748334239
EIKIKQQLLQT	11	Unmodified	_EIKIKQQLLQT_					0	0	0		nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532|DMD;ENSG00000198947|ENST00000357033|DMD;nc|ENSG00000198947|P11532-3|DMD;nc|ENSG00000198947|P11532-2|DMD	nc|ENSG00000198947|P11532-4|DMD	nc|ENSG00000198947|P11532-4|DMD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.76104736328125	3	447.941527	1340.80275	-0.10456	-4.6838E-05	3.0596	0.0013705	2.955	0.0013237	448.2769906287093	23.886	0.25431	23.504	23.365	23.62	-0.38178					7	5	2	0	0	0	0.17648	1	1090	1090		26.75	5.7175	1	38117			6270	8378	4368	4374	7069	7069					0.1459814824561363
EIKKIRNSA	9	Unmodified	_EIKKIRNSA_					0	0	0			REV__nc|ENSG00000115685|Q15435-2|PPP1R7	REV__nc|ENSG00000115685|Q15435-2|PPP1R7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.820068359375	2	529.819473	1057.62439	3.7419	0.0019825	-1.1876	-0.00062922	2.5543	0.0013533	529.818622535591	104.69	1.1649	104.92	104.12	105.28	0.22681					44	27	3	0	0	0	0.7932	1	12799	12799		26.693	0.62953	1	298560	+		6271	18143	4369	4375	7070	7070					0.09788523117254044
EIKKQLTRRP	10	Unmodified	_EIKKQLTRRP_					0	0	0			REV__ENSG00000106804|ENST00000223642|C5	REV__ENSG00000106804|ENST00000223642|C5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8931274414062	2	634.893503	1267.77245	0.93451	0.00059331	-2.8314	-0.0017976	-1.8969	-0.0012043	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.80179	1	11473	11473		39.253	7.6186	1	69492000	+		6272	17631	4370	4376	7071	7071					0.14927834371087556
EIKKQLTRRP	10	Unmodified	_EIKKQLTRRP_					0	0	0			REV__ENSG00000106804|ENST00000223642|C5	REV__ENSG00000106804|ENST00000223642|C5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8943481445312	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.86348	1	11442	11442		31.53	2.3598	1	66671000	+		6273	17631	4370	4376	7072	7072					0.14927834371087556
EIKLCSLLL	9	Unmodified	_EIKLCSLLL_					0	0	0		ENSG00000186141|ENST00000334163|POLR3C	ENSG00000186141|ENST00000334163|POLR3C	ENSG00000186141|ENST00000334163|POLR3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3135375976562	2	516.312103	1030.60965	0.87307	0.00045078	3.072	0.0015861	3.9451	0.0020369	516.313661473355	102.18	1.1387	102.22	101.81	102.94	0.043198					71	27	3	0	0	0	0.76255	1	11117	11117		35.618	5.1146	1	705960			6274	7777	4371	4377	7073	7073					0.09557314924904858
EIKLKKPVQW	10	Unmodified	_EIKLKKPVQW_					0	0	0			REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|103|3|sense	REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|103|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8927001953125	2	634.889898	1267.76524	-0.0069402	-4.4063E-06	4.0361	0.0025625	4.0292	0.0025581	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.42393	2	10933	10933;10957		62.107	5.6261	1	31286000	+		6275	29515	4372	4378	7074;7075	7074					0.14207101770648478
EIKLKKPVQW	10	Unmodified	_EIKLKKPVQW_					0	0	0			REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|103|3|sense	REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|103|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8926391601562	2	634.889898	1267.76524	-0.13084	-8.307E-05	4.2165	0.002677	4.0856	0.0025939	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.6116	1	11517	11517		49.442	5.0644	1	40768000	+		6276	29515	4372	4378	7076	7076					0.14207101770648478
EIKLKKPVQW	10	Unmodified	_EIKLKKPVQW_					0	0	0			REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|103|3|sense	REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|103|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8929443359375	2	634.889898	1267.76524	1.3476	0.00085558	2.8664	0.0018198	4.214	0.0026754	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.6116	2	11525	11525;11561		49.442	6.7194	1	42647000	+		6277	29515	4372	4378	7077;7078	7077					0.14207101770648478
EIKLKKPVQW	10	Unmodified	_EIKLKKPVQW_					0	0	0			REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|103|3|sense	REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|103|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8927612304688	2	634.889898	1267.76524	1.4999	0.00095225	2.3399	0.0014856	3.8398	0.0024378	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.54701	4	11226	11190;11226;11250;11310		52.937	10.072	1	68597000	+		6278	29515	4372	4378	7079;7080;7081;7082	7080					0.14207101770648478
EIKLKKPVQW	10	Unmodified	_EIKLKKPVQW_					0	0	0			REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|103|3|sense	REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|103|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8928833007812	2	634.889898	1267.76524	0.93451	0.00059331	2.8473	0.0018077	3.7818	0.002401	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.4892	3	11297	11213;11249;11297		56.721	7.185	1	69492000	+		6279	29515	4372	4378	7083;7084;7085	7085					0.14207101770648478
EIKLLKKVAVE	11	Unmodified	_EIKLLKKVAVE_					0	0	0			REV__nc|ENSG00000091436|Q9NYL2-3|MAP3K20	REV__nc|ENSG00000091436|Q9NYL2-3|MAP3K20	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	635.4082641601562	2	635.410663	1268.80677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.867	1	15.867	15.367	16.367	0								0	0	0	0.56276	1	72	72		28.081	1.3886	1		+		6280	17013	4373	4379	7086	7086					0.18312237739337434
EIKMKAKKT	9	Unmodified	_EIKMKAKKT_					0	0	0			REV__nc|ENSG00000006459|Q6ZMT4-2|KDM7A	REV__nc|ENSG00000006459|Q6ZMT4-2|KDM7A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.32763671875	2	538.828452	1075.64235	0.076255	4.1088E-05	0.48119	0.00025928	0.55745	0.00030037	538.8288151873915	103.24	0.85712	103.43	103.08	103.94	0.18298					48	21	3	0	0	0	0.20789	1	10965	10965		25.574	4.6271	1	691890	+		6281	16102	4374	4380	7087	7087					0.10755522047725208
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3794555664062	2	626.380229	1250.7459	-0.052383	-3.2812E-05	-0.93966	-0.00058858	-0.99204	-0.0006214	626.37951872247	106.01	2.3248	106.01	105.2	107.53	0					262	53	6	0	0	0	0.51401	20	11023	10894;10904;10915;10927;10939;10951;10963;10975;10987;10999;11011;11023;11035;11059;11071;11095;11120;11145;11157;11169		54.722	19.218	1	37510000			6282	3870	4375	4381	7088;7089;7090;7091;7092;7093;7094;7095;7096;7097;7098;7099;7100;7101;7102;7103;7104;7105;7106;7107	7099					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.9223937988281	3	417.922578	1250.7459	-0.96194	-0.00040202	0.30568	0.00012775	-0.65627	-0.00027427	417.922646807868	105.95	2.4445	105.95	105.29	107.73	0					194	56	4	0	0	0	0.85834	4	11135	10906;10952;10976;11135		34.087	17.557	1	9358100			6283	3870	4375	4381	7108;7109;7110;7111	7111					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3799438476562	2	626.380229	1250.7459	-0.052521	-3.2898E-05	-1.0676	-0.00066873	-1.1201	-0.00070162	626.37954025277	107.79	0.47346	107.79	107.4	107.87	0					35	11	4	0	0	0	0.71918	1	11193	11193		43.651	8.4988	1	13895000			6284	3870	4375	4381	7112	7112					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3790283203125	2	626.380229	1250.7459	-0.22979	-0.00014393	-0.741	-0.00046415	-0.97079	-0.00060808	626.3796521317021	105.9	2.4813	105.88	105.06	107.54	-0.025146					298	58	6	0	0	0	0.60985	24	11404	11404;11415;11427;11439;11451;11463;11475;11487;11499;11511;11523;11535;11547;11559;11571;11583;11595;11607;11619;11631;11643;11655;11683;11695		49.536	16.907	1	47647000			6285	3870	4375	4381	7113;7114;7115;7116;7117;7118;7119;7120;7121;7122;7123;7124;7125;7126;7127;7128;7129;7130;7131;7132;7133;7134;7135;7136	7113					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3800659179688	2	626.380229	1250.7459	-0.23069	-0.0001445	-1.9163	-0.0012003	-2.147	-0.0013448	626.3789495998162	107.88	0.52493	107.84	107.4	107.93	-0.042404					39	12	4	0	0	0	0.51401	2	11717	11717;11739		54.722	16.911	1	14990000			6286	3870	4375	4381	7137;7138	7137					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3793334960938	2	626.380229	1250.7459	2.9096	0.0018225	-3.8515	-0.0024125	-0.94186	-0.00058996	626.377711482176	105.86	2.6957	105.82	104.89	107.59	-0.03714					304	63	6	0	0	0	0.53481	22	11818	11602;11612;11624;11636;11648;11672;11684;11696;11708;11720;11732;11744;11758;11770;11782;11794;11806;11818;11854;11892;11904;11914		49.536	23.962	1	48616000			6287	3870	4375	4381	7139;7140;7141;7142;7143;7144;7145;7146;7147;7148;7149;7150;7151;7152;7153;7154;7155;7156;7157;7158;7159;7160	7156					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3795166015625	2	626.380229	1250.7459	0.93883	0.00058807	-1.8374	-0.0011509	-0.89857	-0.00056285	626.3789780788948	105.75	2.6569	105.79	104.95	107.61	0.038322					312	62	6	0	0	0	0.47091	25	11689	11475;11483;11495;11507;11519;11531;11543;11555;11567;11579;11591;11603;11615;11629;11641;11653;11677;11689;11713;11725;11738;11763;11774;11786;11799		58.23	24.405	1	47947000			6288	3870	4375	4381	7161;7162;7163;7164;7165;7166;7167;7168;7169;7170;7171;7172;7173;7174;7175;7176;7177;7178;7179;7180;7181;7182;7183;7184;7185	7178					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3793334960938	2	626.380229	1250.7459	0.93843	0.00058782	-2.6341	-0.00165	-1.6957	-0.0010622	626.3785118718172	107.88	0.41002	107.92	107.56	107.97	0.035622					35	9	4	0	0	0	0.85297	2	11822	11822;11833		38.754	8.4359	1	11949000			6289	3870	4375	4381	7186;7187	7186					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3804931640625	2	626.380229	1250.7459	1.3741	0.00086073	-2.3075	-0.0014454	-0.93335	-0.00058463	626.3786910858371	105.48	2.5428	105.64	104.92	107.46	0.15924					334	63	6	0	0	0	0.51401	29	11499	11164;11173;11184;11196;11208;11220;11232;11244;11256;11268;11280;11292;11304;11318;11330;11342;11354;11366;11377;11389;11401;11413;11427;11450;11464;11487;11499;11511;11522		54.722	24.709	1	79850000			6290	3870	4375	4381	7188;7189;7190;7191;7192;7193;7194;7195;7196;7197;7198;7199;7200;7201;7202;7203;7204;7205;7206;7207;7208;7209;7210;7211;7212;7213;7214;7215;7216	7214					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.9224853515625	3	417.922578	1250.7459	-1.7716	-0.00074038	1.1592	0.00048446	-0.61238	-0.00025593	417.92308931399344	105.49	2.9586	105.65	104.79	107.75	0.15925					261	73	4	0	0	0	0.86471	1	11311	11311		28.577	0	1	33626000			6291	3870	4375	4381	7217	7217					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3795166015625	2	626.380229	1250.7459	1.374	0.00086065	-3.3314	-0.0020867	-1.9574	-0.0012261	626.3778876948486	107.84	0.75342	107.98	107.32	108.07	0.13867					64	18	4	0	0	0	0.67689	1	11571	11571		49.536	14.384	1	27248000			6292	3870	4375	4381	7218	7218					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.380615234375	2	626.380229	1250.7459	0.92622	0.00058016	-1.9189	-0.001202	-0.9927	-0.00062181	626.3789411036608	105.61	2.6191	105.72	104.9	107.52	0.10766					334	64	6	0	0	0	0.51401	29	11480	11178;11188;11200;11212;11224;11236;11248;11260;11272;11284;11296;11308;11320;11333;11345;11358;11370;11382;11394;11406;11418;11430;11442;11455;11480;11492;11503;11515;11526		54.722	22.771	1	80450000			6293	3870	4375	4381	7219;7220;7221;7222;7223;7224;7225;7226;7227;7228;7229;7230;7231;7232;7233;7234;7235;7236;7237;7238;7239;7240;7241;7242;7243;7244;7245;7246;7247	7243					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.37939453125	2	626.380229	1250.7459	0.92606	0.00058007	-2.534	-0.0015873	-1.608	-0.0010072	626.3785630608256	107.87	0.55867	107.95	107.45	108.01	0.084412					54	13	5	0	0	0	0.72354	3	11551	11551;11564;11576		46.457	15.853	1	22268000			6294	3870	4375	4381	7248;7249;7250	7248					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.37939453125	2	626.380229	1250.7459	-1.2034	-0.00075376	0.27647	0.00017318	-0.92689	-0.00058058	626.3802975335307	105.63	2.6046	105.7	104.93	107.53	0.073112					329	63	6	0	0	0	0.47091	27	11380	11115;11126;11138;11150;11162;11174;11186;11198;11210;11222;11234;11246;11258;11271;11283;11296;11308;11320;11332;11344;11355;11368;11380;11392;11405;11416;11465		58.23	20.418	1	74722000			6295	3870	4375	4381	7251;7252;7253;7254;7255;7256;7257;7258;7259;7260;7261;7262;7263;7264;7265;7266;7267;7268;7269;7270;7271;7272;7273;7274;7275;7276;7277	7273					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92230224609375	3	417.922578	1250.7459	-1.8945	-0.00079175	1.1534	0.00048205	-0.74105	-0.0003097	417.92301973502657	105.61	2.7753	105.68	104.89	107.66	0.073112					226	67	4	0	0	0	0.86047	1	11213	11213		28.577	3.4507	1	18308000			6296	3870	4375	4381	7278	7278					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3795776367188	2	626.380229	1250.7459	-1.2034	-0.00075379	0.16823	0.00010538	-1.0352	-0.00064842	626.3801652504003	107.85	0.68172	107.89	107.29	107.97	0.036125					50	16	4	0	0	0	0.66675	3	11501	11476;11489;11501		46.457	7.2767	1	22990000			6297	3870	4375	4381	7279;7280;7281	7281					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3792724609375	2	626.380229	1250.7459	2.0982	0.0013142	-3.0036	-0.0018814	-0.90548	-0.00056717	626.3782628803294	105.51	2.7267	105.67	104.93	107.65	0.15583					187	94	2	0	0	0	0.74563	1	12797	12797		37.508	9.4267	1	2939000			6298	3870	4375	4381	7282	7282					0.13056145479754377
EIKNTLRKHI	10	Unmodified	_EIKNTLRKHI_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	626.380229	1250.7459	2.2013	0.0013789	-0.73947	-0.00046319	1.4619	0.00091568	626.3806429365513	107.86	0.44553	107.95	107.57	108.01	0.084457	0.050807	0.0016367	NaN	54.722	38	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1839300			6299	3870	4375	4381							0.13056145479754377
EIKPGPIVIEL	11	Unmodified	_EIKPGPIVIEL_					0	0	0		nc|ENSG00000186063|Q96BJ3-2|AIDA;ENST00000514881.1_1_4:159199390-159199825:+|nuORF;nc|ENSG00000186063|Q96BJ3-3|AIDA;ENSG00000186063|ENST00000340020|AIDA	nc|ENSG00000186063|Q96BJ3-2|AIDA	nc|ENSG00000186063|Q96BJ3-2|AIDA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.36767578125	2	604.368464	1206.72238	-1.2751	-0.00077064	-1.2835	-0.00077571	-2.5586	-0.0015464	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.79294	1	12147	12147		12.812	1.3007	1	3346600			6300	7770	4376	4382	7283	7283					0.1272828692258372
EIKPGQNN	8	Unmodified	_EIKPGQNN_					0	0	0		nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC;ENSG00000134982|ENST00000257430|APC	nc|ENSG00000134982|P25054-2|APC	nc|ENSG00000134982|P25054-2|APC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.27435302734375	2	450.232699	898.450845	1.3313	0.00059939	0.51537	0.00023204	1.8467	0.00083142	450.2326973461984	93.255	0.50973	93.301	93.198	93.708	0.045448					14	11	2	0	0	0	0.4196	1	9821	9821		27.882	4.8398	1	60488			6301	3976	4377	4383	7284	7284					-0.002442626590436703
EIKQQPGAL	9	Unmodified	_EIKQQPGAL_					0	0	0			REV__ENST00000332359.5_1_X:149282682-149283381:+|nuORF	REV__ENST00000332359.5_1_X:149282682-149283381:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.2781982421875	2	492.279649	982.544745	-0.23302	-0.00011471	0.43605	0.00021466	0.20302	9.9943E-05	492.27983484983844	26.363	0.57969	26.325	26.096	26.676	-0.038525					21	11	3	0	0	0	0.55097	1	1177	1177		49.442	3.4693	1	47661	+		6302	25138	4378	4384	7285	7285					0.05277456443241135
EIKRHQEFY	9	Unmodified	_EIKRHQEFY_					0	0	0			REV__ENST00000484852.1_1_3:147884522-147885023:-|nuORF	REV__ENST00000484852.1_1_3:147884522-147885023:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.3245849609375	2	625.319837	1248.62512	-0.61694	-0.00038578	1.0323	0.00064554	0.4154	0.00025976	625.3204345211741	64.692	1.0387	64.692	64.408	65.447	0					102	48	3	0	0	0	0.74721	1	5741	5741		37.159	0	1	308710	+		6303	27518	4379	4385	7286	7286					0.01075317766299122
EIKRKKAHPD	10	Unmodified	_EIKRKKAHPD_					0	0	0		nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA;ENSG00000113360|ENST00000344624|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3543701171875	2	611.356754	1220.69895	1.1383	0.00069592	-2.4619	-0.0015051	-1.3236	-0.0008092	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.8545	1	9685	9685		36.447	3.6343	1	7316900			6304	2716	4380	4386	7287	7287					0.09743285928607293
EIKRKKAHPD	10	Unmodified	_EIKRKKAHPD_					0	0	0		nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA;ENSG00000113360|ENST00000344624|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3545532226562	2	611.356754	1220.69895	-1.2523	-0.00076561	-0.012793	-7.8212E-06	-1.2651	-0.00077343	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.85981	1	9658	9658		35.152	3.5178	1	5978100			6305	2716	4380	4386	7288	7288					0.09743285928607293
EIKRQRIEKL	10	Unmodified	_EIKRQRIEKL_					0	0	0		ENSG00000157856|ENST00000288710|DRC1	ENSG00000157856|ENST00000288710|DRC1	ENSG00000157856|ENST00000288710|DRC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.27252197265625	3	438.273499	1311.79867	2.7278	0.0011955	-3.9418	-0.0017276	-1.2141	-0.00053209	438.27166879991887	107.29	1.1275	107.26	106.75	107.88	-0.034134					106	26	5	0	0	0	0.86647	1	11883	11883		28.577	1.5294	1	5019700			6306	5451	4381	4387	7289	7289					0.1552410354256608
EIKRRKMA	8	Unmodified	_EIKRRKMA_					0	0	0		ENST00000483767.5_1_1:880076-882054:-|nuORF;ENST00000477976.5_1_1:880076-889593:-|nuORF;ENSG00000188976|ENST00000327044|NOC2L	ENST00000483767.5_1_1:880076-882054:-|nuORF	ENST00000483767.5_1_1:880076-882054:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3139038085938	2	516.310761	1030.60697	2.7794	0.001435	3.1012	0.0016012	5.8806	0.0030362	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.87922	6	10779	10743;10755;10779;10803;10875;10971		38.806	8.3025	1	67991000			6307	7974	4382	4388	7290;7291;7292;7293;7294;7295	7292					0.0928890431059699
EIKRRKMA	8	Unmodified	_EIKRRKMA_					0	0	0		ENST00000483767.5_1_1:880076-882054:-|nuORF;ENST00000477976.5_1_1:880076-889593:-|nuORF;ENSG00000188976|ENST00000327044|NOC2L	ENST00000483767.5_1_1:880076-882054:-|nuORF	ENST00000483767.5_1_1:880076-882054:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3145141601562	2	516.310761	1030.60697	1.9037	0.0009829	4.3859	0.0022645	6.2896	0.0032474	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.86288	4	12091	11945;11982;12041;12091		38.806	4.9296	1	22616000			6308	7974	4382	4388	7296;7297;7298;7299	7299					0.0928890431059699
EIKRRYPNRKR	11	Unmodified	_EIKRRYPNRKR_					0	0	0		L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|22|2|sense	L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|22|2|sense	L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|22|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.9746398925781	3	505.970814	1514.89061	2.9436	0.0014894	3.4328	0.0017369	6.3765	0.0032263	505.97247130566444	107.89	0.59716	107.86	107.34	107.94	-0.031487					54	14	6	0	0	0	0.70278	2	11967	11945;11967		31.068	18.111	1	180330000			6309	14617	4383	4389	7300;7301	7301					0.15376206679570714
EIKRRYPNRKR	11	Unmodified	_EIKRRYPNRKR_					0	0	0		L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|22|2|sense	L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|22|2|sense	L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|22|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.9736022949219	3	505.970814	1514.89061	2.9404	0.0014878	4.0115	0.0020297	6.9519	0.0035175	505.97287794220534	112.87	7.7849	112.84	112.19	119.97	-0.024811					550	277	2	0	0	0	0.77803	2	12487	12429;12487		15.921	2.4127	1	2261500			6310	14617	4383	4389	7302;7303	7303					0.15376206679570714
EIKSHSRGKS	10	Unmodified	_EIKSHSRGKS_					0	0	0			REV__ENSG00000206535|ENST00000383693|LNP1	REV__ENSG00000206535|ENST00000383693|LNP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.810546875	2	564.809636	1127.60472	-0.37649	-0.00021265	2.1567	0.0012181	1.7802	0.0010055	564.8107495054859	109.87	1.7926	109.87	109.6	111.4	0					169	64	4	0	0	0	0.78666	2	11427	11394;11427		40.058	3.6114	1	3988700	+		6311	23590	4384	4390	7304;7305	7305					0.046021471064932484
EIKTREKK	8	Unmodified	_EIKTREKK_					0	0	0			REV__ENST00000583329.5_1_17:73699767-73702598:+|nuORF	REV__ENST00000583329.5_1_17:73699767-73702598:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3133544921875	2	516.314023	1030.61349	-0.047196	-2.4368E-05	-0.36182	-0.00018681	-0.40901	-0.00021118	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.91472	1	10893	10893		44.117	8.4985	1	63062000	+		6312	20766	4385	4391	7306	7306					0.09941120742928433
EIKVKVDN	8	Unmodified	_EIKVKVDN_					0	0	0		ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3	ENSG00000118482|ENST00000262043|PHF3	ENSG00000118482|ENST00000262043|PHF3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2875671386719	2	472.7742	943.533846	-0.911	-0.0004307	-0.7041	-0.00033288	-1.6151	-0.00076358	472.77394869962706	95.258	0.66638	95.489	95.388	96.055	0.23103					19	15	2	0	0	0	0.4196	1	9760	9760		34.173	17.699	1	133620			6313	3031	4386	4392	7307	7307					0.05982054068954312
EIKVPEKQVVE	11	Unmodified	_EIKVPEKQVVE_					0	0	0			REV__nc|ENSG00000084093|Q13127-4|REST	REV__nc|ENSG00000084093|Q13127-4|REST	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	649.364501953125	2	649.371735	1296.72892	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.479	1	67.864	67.364	68.364	0.38515								0	0	0	0.56276	1	7390	7390		32.751	1.2207	1		+		6314	16868	4387	4393	7308	7308					0.09242180083288076
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2903747558594	2	501.290548	1000.56654	-0.9424	-0.00047241	0.84818	0.00042518	-0.094216	-4.7229E-05	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.68711	4	8523	8305;8340;8523;8727		41.427	10.923	1	6939200	+		6315	18498	4388	4394	7309;7310;7311;7312	7311					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29034423828125	2	501.290548	1000.56654	-0.064942	-3.2555E-05	-0.21369	-0.00010712	-0.27863	-0.00013967	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.75725	3	8457	8386;8397;8457		36.447	5.9431	1	2854100	+		6316	18498	4388	4394	7313;7314;7315	7315					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29034423828125	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.75725	6	8691	8691;8715;8763;8787;8799;8823		36.447	4.6509	1	9565500	+		6317	18498	4388	4394	7316;7317;7318;7319;7320;7321	7316					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2904052734375	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.68711	2	8644	8644;8754		41.427	7.505	1	2850500	+		6318	18498	4388	4394	7322;7323	7322					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2905578613281	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.68711	7	9137	8800;8884;8908;8968;9028;9052;9137		41.427	7.2972	1	9883700	+		6319	18498	4388	4394	7324;7325;7326;7327;7328;7329;7330	7330					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2900695800781	2	501.290548	1000.56654	-0.52378	-0.00026256	0.16738	8.3908E-05	-0.35639	-0.00017866	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.66686	1	8466	8466		42.864	0.46813	1	2929300	+		6320	18498	4388	4394	7331	7331					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.29052734375	2	501.290548	1000.56654	-0.36653	-0.00018374	0.15869	7.9552E-05	-0.20784	-0.00010419	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.75725	4	8765	8765;8801;8849;8861		36.447	4.9169	1	9903700	+		6321	18498	4388	4394	7332;7333;7334;7335	7332					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904357910156	2	501.290548	1000.56654	0.65622	0.00032896	-1.0593	-0.000531	-0.40304	-0.00020204	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.75725	3	8118	8118;8175;8283		36.447	7.2767	1	2931000	+		6322	18498	4388	4394	7336;7337;7338	7336					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904052734375	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.70638	5	8462	8367;8426;8450;8462;8498		40.058	4.7721	1	9566900	+		6323	18498	4388	4394	7339;7340;7341;7342;7343	7342					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2904052734375	2	501.290548	1000.56654	-1.5697	-0.00078686	1.3648	0.00068414	-0.20492	-0.00010273	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.75725	6	8421	8361;8373;8421;8445;8469;8814		36.447	3.6039	1	9242300	+		6324	18498	4388	4394	7344;7345;7346;7347;7348;7349	7346					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29052734375	2	501.290548	1000.56654	-0.86867	-0.00043546	0.96116	0.00048182	0.092492	4.6365E-05	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.51592	1	9719	9719		51.193	5.2204	1	2445400	+		6325	18498	4388	4394	7350	7350					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2908630371094	2	501.290548	1000.56654	0.16565	8.304E-05	-0.064258	-3.2212E-05	0.10139	5.0828E-05	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.77696	1	9954	9954		31.53	1.0262	1	2717900	+		6326	18498	4388	4394	7351	7351					0.06628261191804086
EIKVQRATG	9	Unmodified	_EIKVQRATG_					0	0	0			REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2906799316406	2	501.290548	1000.56654	-0.45423	-0.0002277	0.14645	7.3413E-05	-0.30779	-0.00015429	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.75725	1	10084	10084		36.447	4.9169	1	9727400	+		6327	18498	4388	4394	7352	7352					0.06628261191804086
EIKYILDKK	9	Unmodified	_EIKYILDKK_					0	0	0			REV__ENSG00000189108|ENST00000372582|IL1RAPL2	REV__ENSG00000189108|ENST00000372582|IL1RAPL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.3456420898438	2	575.347532	1148.68051	0.61456	0.00035358	-3.9136	-0.0022517	-3.299	-0.0018981	575.3451796941858	98.405	2.0882	98.633	98.17	100.26	0.22787					146	48	5	0	0	0	0.76419	1	10198	10198		35.152	1.2304	1	2884500	+		6328	23065	4389	4395	7353	7353					0.11211731234061517
EIKYILDKK	9	Unmodified	_EIKYILDKK_					0	0	0			REV__ENSG00000189108|ENST00000372582|IL1RAPL2	REV__ENSG00000189108|ENST00000372582|IL1RAPL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.3463745117188	2	575.347532	1148.68051	0.94019	0.00054093	-3.6496	-0.0020998	-2.7094	-0.0015588	575.3454322863764	98.249	1.7248	98.634	98.18	99.904	0.38548					107	42	5	0	0	0	0.78058	1	11887	11887		30.504	1.3541	1	3140900	+		6329	23065	4389	4395	7354	7354					0.11211731234061517
EILAQLVCL	9	Unmodified	_EILAQLVCL_					0	0	0			REV__ENST00000287020.6_1_8:97156375-97156525:-|nuORF	REV__ENST00000287020.6_1_8:97156375-97156525:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.28924560546875	2	501.288628	1000.5627	1.9814	0.00099324	2.0395	0.0010224	4.0209	0.0020156	501.2894698327482	99.155	1.1501	99.518	99.094	100.24	0.36292					59	28	3	0	0	0	0.7932	1	11986	11986		26.796	0	1	1034500	+		6330	24644	4390	4396	7355	7355					0.06244455373735036
EILAVTLVAP	10	Unmodified	_EILAVTLVAP_					0	0	0			REV__ENSG00000108576|ENST00000650711|SLC6A4	REV__ENSG00000108576|ENST00000650711|SLC6A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.317626953125	2	513.3157	1024.61685	-0.38471	-0.00019748	2.4513	0.0012583	2.0666	0.0010608	513.3169360200682	55.22	1.0911	55.284	54.878	55.969	0.063721					55	37	2	0	0	0	0.86763	1	4634	4634		26.693	9.3279	1	243480	+		6331	17720	4391	4397	7356	7356					0.10552370796949617
EILCQAVLL	9	Unmodified	_EILCQAVLL_					0	0	0		chr4:98891332-98893166|25|22.28|0.36|5.96|-|1|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|2;chr4:98891332-98895182|23|10.48|0.35|4.89|-|1|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98895182,98895324|EIF4E,None|2	chr4:98891332-98893166|25|22.28|0.36|5.96|-|1|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|2	chr4:98891332-98893166|25|22.28|0.36|5.96|-|1|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2906188964844	2	501.288628	1000.5627	1.1291	0.00056599	2.4986	0.0012525	3.6277	0.0018185	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.64922	2	9307	9125;9307		44.117	6.9577	1	9883700			6332	437	4392	4398	7357;7358	7358					0.06244455373735036
EILDLRRQVLV	11	Unmodified	_EILDLRRQVLV_					0	0	0		ENST00000468571.1_7:111617053-111644151:-|nuORF;ENST00000476846.1_7:111503332-111846439:-|nuORF;nc|ENSG00000128512|Q8N1I0|DOCK4;ENSG00000128512|ENST00000428084|DOCK4;nc|ENSG00000128512|Q8N1I0-2|DOCK4	ENST00000468571.1_7:111617053-111644151:-|nuORF;nc|ENSG00000128512|Q8N1I0|DOCK4	nc|ENSG00000128512|Q8N1I0|DOCK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9427185058594	3	451.945271	1352.81398	-0.53384	-0.00024127	-4.227	-0.0019104	-4.7608	-0.0021516	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.76579	1	4299	4299		18.531	1.3643	1	920720			6333	3544;12181	4393	4399	7359	7359					0.15168970339755106
EILGGQGAH	9	Unmodified	_EILGGQGAH_					0	0	0			REV__nc|ENSG00000135100|P20823-6|HNF1A	REV__nc|ENSG00000135100|P20823-6|HNF1A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25506591796875	2	441.227417	880.44028	-1.2907	-0.00056949	-3.1337	-0.0013827	-4.4244	-0.0019522	441.22588078666854	72.061	0.49921	72.447	72.167	72.667	0.38581					16	11	2	0	0	0	0.20789	1	8037	8037		16.473	2.6978	1	66364	+		6334	29861	4394	4400	7360	7360					-0.004722453134831994
EILGLHQAFL	10	Unmodified	_EILGLHQAFL_					0	0	0		ENSG00000149646|ENST00000373973|CNBD2	ENSG00000149646|ENST00000373973|CNBD2	ENSG00000149646|ENST00000373973|CNBD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.8264770507812	2	570.824224	1139.63389	0.28979	0.00016542	0.98882	0.00056444	1.2786	0.00072986	570.8247161195649	58.881	1.0315	59.435	59.047	60.079	0.55323					56	25	3	0	0	0	0.8651	1	6202	6202		25.574	0	1	762650			6335	5043	4395	4401	7361	7361					0.06966291402773095
EILHRDLKLG	10	Unmodified	_EILHRDLKLG_					0	0	0		ENST00000515415.5_1_5:57754112-57754961:-|nuORF;ENSG00000145632|ENST00000274289|PLK2	ENST00000515415.5_1_5:57754112-57754961:-|nuORF	ENST00000515415.5_1_5:57754112-57754961:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.35693359375	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.86272	1	9625	9625		24.519	1.9395	1	18777000			6336	4780	4396	4402	7362	7362					0.10416767697074647
EILIPEALP	9	Unmodified	_EILIPEALP_					0	0	0		nc|ENSG00000040199|Q6ZVD8-3|PHLPP2;ENSG00000040199|ENST00000568954|PHLPP2;nc|ENSG00000040199|Q6ZVD8-2|PHLPP2	nc|ENSG00000040199|Q6ZVD8-3|PHLPP2	nc|ENSG00000040199|Q6ZVD8-3|PHLPP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.79571533203125	2	497.794601	993.574648	-1.5279	-0.00076056	3.9438	0.0019632	2.4159	0.0012026	497.79634722185193	48.476	0.80991	48.476	47.85	48.66	0					53	20	3	0	0	0	0.7932	1	3773	3773		23.042	1.3402	1	518630			6337	927	4397	4403	7363	7363					0.07760395388561392
EILIPEALP	9	Unmodified	_EILIPEALP_					0	0	0		nc|ENSG00000040199|Q6ZVD8-3|PHLPP2;ENSG00000040199|ENST00000568954|PHLPP2;nc|ENSG00000040199|Q6ZVD8-2|PHLPP2	nc|ENSG00000040199|Q6ZVD8-3|PHLPP2	nc|ENSG00000040199|Q6ZVD8-3|PHLPP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.79510498046875	2	497.794601	993.574648	0.32849	0.00016352	2.1792	0.0010848	2.5077	0.0012483	497.7954109844358	48.391	0.87605	48.429	47.96	48.836	0.037731					54	21	3	0	0	0	0.77546	1	3687	3687		31.955	6.5047	1	407880			6338	927	4397	4403	7364	7364					0.07760395388561392
EILKIRFYAI	10	Unmodified	_EILKIRFYAI_					0	0	0			REV__ENSG00000256162|ENST00000541421|SMLR1	REV__ENSG00000256162|ENST00000541421|SMLR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5919189453125	3	422.592058	1264.75434	-0.026175	-1.1061E-05	1.3929	0.00058863	1.3667	0.00057757	422.59256755528145	49.138	2.4235	49.133	48.474	50.898	-0.0056419					208	62	5	0	0	0	0.85441	1	4030	4030		20.837	0.80668	1	1959300	+		6339	23905	4398	4404	7365	7365					0.13255699396404452
EILKIRFYAI	10	Unmodified	_EILKIRFYAI_					0	0	0			REV__ENSG00000256162|ENST00000541421|SMLR1	REV__ENSG00000256162|ENST00000541421|SMLR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59234619140625	3	422.592058	1264.75434	-0.79538	-0.00033612	2.2528	0.00095203	1.4574	0.00061591	422.592922669687	49.251	2.9518	49.227	47.881	50.833	-0.024033					246	71	5	0	0	0	0.86338	2	4158	4158;4330		31.634	3.5246	1	2205000	+		6340	23905	4398	4404	7366;7367	7366					0.13255699396404452
EILKIRFYAI	10	Unmodified	_EILKIRFYAI_					0	0	0			REV__ENSG00000256162|ENST00000541421|SMLR1	REV__ENSG00000256162|ENST00000541421|SMLR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5928649902344	3	422.592058	1264.75434	-0.62548	-0.00026432	3.0702	0.0012974	2.4447	0.0010331	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.85285	1	4894	4894		16.717	0	1	1069500	+		6341	23905	4398	4404	7368	7368					0.13255699396404452
EILKIRFYAI	10	Unmodified	_EILKIRFYAI_					0	0	0			REV__ENSG00000256162|ENST00000541421|SMLR1	REV__ENSG00000256162|ENST00000541421|SMLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5925598144531	3	422.592058	1264.75434	-0.50953	-0.00021532	1.9207	0.00081167	1.4112	0.00059634	422.59276833389157	49.547	2.3163	49.454	48.483	50.799	-0.093178					199	59	5	0	0	0	0.85086	1	3793	3793		19.263	2.7328	1	1796900	+		6342	23905	4398	4404	7369	7369					0.13255699396404452
EILKIRFYAI	10	Unmodified	_EILKIRFYAI_					0	0	0			REV__ENSG00000256162|ENST00000541421|SMLR1	REV__ENSG00000256162|ENST00000541421|SMLR1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.9266052246094	3	422.592058	1264.75434	-0.6351	-0.00026839	1.8458	0.00078002	1.2107	0.00051163	422.59269266623227	53.26	1.1275	53.198	52.52	53.647	-0.062061					70	30	3	0	0	0	0.37624	1	4308	4308		11.097	0	1	161760	+		6343	23905	4398	4404	7370	7370					0.13255699396404452
EILKIRFYAI	10	Unmodified	_EILKIRFYAI_					0	0	0			REV__ENSG00000256162|ENST00000541421|SMLR1	REV__ENSG00000256162|ENST00000541421|SMLR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5929870605469	3	422.592058	1264.75434	-0.80518	-0.00034026	2.6379	0.0011148	1.8327	0.0007745	422.59310710706274	46.905	2.5172	47.828	47.069	49.587	0.92315					149	61	4	0	0	0	0.85259	1	4453	4453		20.03	4.0237	1	3696000	+		6344	23905	4398	4404	7371	7371					0.13255699396404452
EILKKLNH	8	Unmodified	_EILKKLNH_					0	0	0		nc|ENSG00000183765|O96017-8|CHEK2;nc|ENSG00000183765|O96017-7|CHEK2;nc|ENSG00000183765|O96017-12|CHEK2;ENSG00000183765|ENST00000404276|CHEK2;nc|ENSG00000183765|O96017-9|CHEK2;ENST00000439346.5_1_22:29095780-29107983:-|nuORF;nc|ENSG00000183765|O96017-13|CHEK2;nc|ENSG00000183765|O96017-4|CHEK2	nc|ENSG00000183765|O96017-8|CHEK2	nc|ENSG00000183765|O96017-8|CHEK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.80255126953125	2	497.805834	993.597115	-0.58965	-0.00029353	-1.0818	-0.00053852	-1.6714	-0.00083205	497.80543537633326	68.76	0.49638	68.895	68.654	69.151	0.13522					29	20	2	0	0	0	0.84341	1	6192	6192		24.203	0	1	78562			6345	7557	4399	4405	7372	7372					0.1000603957684234
EILKKLNH	8	Unmodified	_EILKKLNH_					0	0	0		nc|ENSG00000183765|O96017-8|CHEK2;nc|ENSG00000183765|O96017-7|CHEK2;nc|ENSG00000183765|O96017-12|CHEK2;ENSG00000183765|ENST00000404276|CHEK2;nc|ENSG00000183765|O96017-9|CHEK2;ENST00000439346.5_1_22:29095780-29107983:-|nuORF;nc|ENSG00000183765|O96017-13|CHEK2;nc|ENSG00000183765|O96017-4|CHEK2	nc|ENSG00000183765|O96017-8|CHEK2	nc|ENSG00000183765|O96017-8|CHEK2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	497.805834	993.597115	0.51274	0.00025525	-2.5573	-0.0012731	-2.0446	-0.0010178	497.804727324159	68.837	0.53845	68.966	68.65	69.188	0.12838	-0.025938	-0.0013094	NaN	24.203	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67284			6346	7557	4399	4405							0.1000603957684234
EILKKLNH	8	Unmodified	_EILKKLNH_					0	0	0		nc|ENSG00000183765|O96017-8|CHEK2;nc|ENSG00000183765|O96017-7|CHEK2;nc|ENSG00000183765|O96017-12|CHEK2;ENSG00000183765|ENST00000404276|CHEK2;nc|ENSG00000183765|O96017-9|CHEK2;ENST00000439346.5_1_22:29095780-29107983:-|nuORF;nc|ENSG00000183765|O96017-13|CHEK2;nc|ENSG00000183765|O96017-4|CHEK2	nc|ENSG00000183765|O96017-8|CHEK2	nc|ENSG00000183765|O96017-8|CHEK2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	497.805834	993.597115	-0.35718	-0.0001778	3.2668	0.0016262	2.9096	0.0014484	497.80788487531856	68.567	0.20427	69.114	68.95	69.154	0.54693	0.12243	0.0044892	NaN	24.203	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22855			6347	7557	4399	4405							0.1000603957684234
EILKLLSD	8	Unmodified	_EILKLLSD_					0	0	0		nc|ENSG00000153815|Q8IY22-3|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;ENSG00000153815|ENST00000537098|CMIP	nc|ENSG00000153815|Q8IY22-3|CMIP	nc|ENSG00000153815|Q8IY22-3|CMIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7776184082031	2	465.778951	929.543348	-0.1189	-5.538E-05	-2.6882	-0.0012521	-2.8071	-0.0013075	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.89494	1	7902	7902		37.159	1.9584	1	345200			6348	5243	4400	4406	7373	7373					0.07575822354476713
EILKQKELRR	10	Unmodified	_EILKQKELRR_					0	0	0		ENST00000307403.6_1_7:155532339-155538302:+|nuORF;ENSG00000184863|ENST00000401878|RBM33	ENST00000307403.6_1_7:155532339-155538302:+|nuORF	ENST00000307403.6_1_7:155532339-155538302:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.27313232421875	3	438.273499	1311.79867	-0.15875	-6.9576E-05	-0.97566	-0.00042761	-1.1344	-0.00049718	438.2729904466262	106.56	0.95083	106.53	106.1	107.05	-0.025146					93	21	6	0	0	0	0.86446	1	11572	11572		30.569	3.5215	1	4356100			6349	7647	4401	4407	7374	7374					0.15524103542543344
EILKQKELRR	10	Unmodified	_EILKQKELRR_					0	0	0		ENST00000307403.6_1_7:155532339-155538302:+|nuORF;ENSG00000184863|ENST00000401878|RBM33	ENST00000307403.6_1_7:155532339-155538302:+|nuORF	ENST00000307403.6_1_7:155532339-155538302:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.27301025390625	3	438.273499	1311.79867	2.0595	0.00090261	-3.3503	-0.0014684	-1.2909	-0.00056576	438.2719380139852	107.11	1.2259	107.15	106.67	107.9	0.035614					128	28	5	0	0	0	0.86014	1	11798	11798		23.378	1.5975	1	4659700			6350	7647	4401	4407	7375	7375					0.15524103542543344
EILKRNPNVNL	11	Unmodified	_EILKRNPNVNL_					0	0	0		ENST00000471275.1_1_2:8940499-8946457:-|nuORF;nc|ENSG00000134313|Q9ULH0-3|KIDINS220;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;nc|ENSG00000134313|Q9ULH0-4|KIDINS220;ENSG00000134313|ENST00000256707|KIDINS220	ENST00000471275.1_1_2:8940499-8946457:-|nuORF	ENST00000471275.1_1_2:8940499-8946457:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2561950683594	3	437.257738	1308.75138	-1.0127	-0.0004428	0.097666	4.2705E-05	-0.91501	-0.00040009	437.25769841228777	99.435	2.9287	99.435	98.234	101.16	0					165	70	3	0	0	0	0.71803	1	10122	10122		28.577	2.5133	1	385900			6351	3927	4402	4408	7376	7376					0.10935824271564343
EILKSPIL	8	Unmodified	_EILKSPIL_					0	0	0		nc|ENSG00000188158|Q6T4R5-2|NHS;ENSG00000188158|ENST00000676302|NHS;nc|ENSG00000188158|Q6T4R5-4|NHS;nc|ENSG00000188158|Q6T4R5-3|NHS	nc|ENSG00000188158|Q6T4R5-2|NHS	nc|ENSG00000188158|Q6T4R5-2|NHS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7923278808594	2	456.791861	911.569169	-0.27328	-0.00012483	2.9008	0.0013251	2.6275	0.0012002	456.79291204486344	46.231	0.96013	46.152	45.759	46.72	-0.079002					46	26	3	0	0	0	0.91005	1	3344	3344		42.474	7.2737	1	152910			6352	7910	4403	4409	7377	7377					0.10984716596760791
EILQAIRLWK	10	Unmodified	_EILQAIRLWK_					0	0	0		L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|1|1|sense	L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|1|1|sense	L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|1|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.75079345703125	3	423.92744	1268.76049	-1.149	-0.0004871	-2.3632	-0.0010018	-3.5122	-0.0014889	423.9264128122311	39.768	0.98392	40.323	39.702	40.686	0.5545					36	22	2	0	0	0	0.37624	1	3338	3338		23.378	6.2112	1	200780			6353	14546	4404	4410	7378	7378					0.1368621762787825
EILQRPRLQL	10	Unmodified	_EILQRPRLQL_					0	0	0		nc|ENSG00000134571|Q14896-2|MYBPC3;ENSG00000134571|ENST00000545968|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.59259033203125	3	422.594461	1264.76155	-1.7089	-0.00072219	-2.1559	-0.00091106	-3.8648	-0.0016332	422.5934868146553	51.644	2.8751	51.644	50.918	53.793	0					103	79	2	0	0	0	0.85285	1	4398	4398		16.717	0	1	112760			6354	3945	4405	4411	7379	7379					0.13976431996798055
EILQRPRLQL	10	Unmodified	_EILQRPRLQL_					0	0	0		nc|ENSG00000134571|Q14896-2|MYBPC3;ENSG00000134571|ENST00000545968|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	422.594461	1264.76155	-0.087938	-3.7162E-05	-3.8216	-0.001615	-3.9095	-0.0016521	422.59276463200945	51.275	1.2847	51.272	50.749	52.033	-0.0020447	-0.098024	-0.00032212	NaN	16.717	88	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	154920			6355	3945	4405	4411							0.13976431996798055
EILQRPRLQL	10	Unmodified	_EILQRPRLQL_					0	0	0		nc|ENSG00000134571|Q14896-2|MYBPC3;ENSG00000134571|ENST00000545968|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	422.594461	1264.76155	-0.75718	-0.00031998	-3.1268	-0.0013214	-3.884	-0.0016413	422.5930652731721	51.261	1.1505	51.238	50.751	51.902	-0.023426	-0.13283	0.00055877	NaN	16.717	71	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	256160			6356	3945	4405	4411							0.13976431996798055
EILQRPRLQL	10	Unmodified	_EILQRPRLQL_					0	0	0		nc|ENSG00000134571|Q14896-2|MYBPC3;ENSG00000134571|ENST00000545968|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	422.594461	1264.76155	2.0189	0.00085316	-5.8137	-0.0024569	-3.7949	-0.0016037	422.59185620639636	51.639	2.4644	51.651	50.782	53.246	0.012436	0.28051	-0.0028477	NaN	16.717	154	65	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178290			6357	3945	4405	4411							0.13976431996798055
EILQRPRLQL	10	Unmodified	_EILQRPRLQL_					0	0	0		nc|ENSG00000134571|Q14896-2|MYBPC3;ENSG00000134571|ENST00000545968|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	422.594461	1264.76155	-1.8178	-0.00076821	-2.3898	-0.0010099	-4.2076	-0.0017781	422.5934013751848	51.055	2.1301	51.09	50.525	52.655	0.034584	-0.28049	0.0014932	NaN	16.717	143	65	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	278890			6358	3945	4405	4411							0.13976431996798055
EILQRPRLQL	10	Unmodified	_EILQRPRLQL_					0	0	0		nc|ENSG00000134571|Q14896-2|MYBPC3;ENSG00000134571|ENST00000545968|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	422.594461	1264.76155	-0.57867	-0.00024454	-3.606	-0.0015239	-4.1846	-0.0017684	422.59285650480007	51.412	2.0391	51.328	50.458	52.497	-0.084538	-0.042773	-4.8746E-05	NaN	16.717	131	61	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	295990			6359	3945	4405	4411							0.13976431996798055
EILQRTIRVKG	11	Unmodified	_EILQRTIRVKG_					0	0	0			REV__nc|ENSG00000083535|Q8WXW3-3|PIBF1	REV__nc|ENSG00000083535|Q8WXW3-3|PIBF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2728271484375	3	438.273499	1311.79867	2.0595	0.00090261	-3.3503	-0.0014684	-1.2909	-0.00056576	438.2719380139852	107.11	1.2259	107.15	106.67	107.9	0.035614					128	28	5	0	0	0	0.72892	1	11703	11703		26.75	1.6237	1	4659700	+		6360	16856	4406	4412	7380	7380					0.15524103542520606
EILQRTIRVKG	11	Unmodified	_EILQRTIRVKG_					0	0	0			REV__nc|ENSG00000083535|Q8WXW3-3|PIBF1	REV__nc|ENSG00000083535|Q8WXW3-3|PIBF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.273193359375	3	438.273499	1311.79867	-1.4634	-0.00064136	0.1078	4.7245E-05	-1.3556	-0.00059411	438.2734550831373	106.96	1.4325	107.1	106.6	108.03	0.14105					150	35	5	0	0	0	0.72374	1	11498	11498		27.644	0.59661	1	5372900	+		6361	16856	4406	4412	7381	7381					0.15524103542520606
EILRATGKSA	10	Unmodified	_EILRATGKSA_					0	0	0			REV__ENSG00000095574|ENST00000368886|IKZF5	REV__ENSG00000095574|ENST00000368886|IKZF5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3037109375	2	523.303655	1044.59276	3.0919	0.001618	-2.8506	-0.0014917	0.2413	0.00012627	523.3019807160215	101.24	1.6009	101.19	100.54	102.14	-0.049835					80	37	4	0	0	0	0.86587	1	11041	11041		29.17	1.2878	1	999760	+		6362	17062	4407	4413	7382	7382					0.07224530363305348
EILSIELVP	9	Unmodified	_EILSIELVP_					0	0	0			REV__ENST00000518946.1_1_5:153372538-153374550:-|nuORF	REV__ENST00000518946.1_1_5:153372538-153374550:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.7997131347656	2	506.799883	1011.58521	-0.28255	-0.0001432	3.2617	0.001653	2.9791	0.0015098	506.80140373255165	50.862	1.8071	50.77	50.35	52.158	-0.091797					82	54	2	0	0	0	0.7932	1	4102	4102		23.042	1.0826	1	131380	+		6363	16409	4408	4414	7383	7383					0.07988378042989552
EILSISCKK	9	Unmodified	_EILSISCKK_					0	0	0		ENST00000329463.9_3_3:154032896-154032950:-|nuORF	ENST00000329463.9_3_3:154032896-154032950:-|nuORF	ENST00000329463.9_3_3:154032896-154032950:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.7896728515625	2	510.791535	1019.56852	-0.41504	-0.000212	-2.8721	-0.001467	-3.2871	-0.001679	510.78983913698113	59.312	0.57942	59.406	59.221	59.8	0.094059					23	15	2	0	0	0	0.51307	1	5074	5074		51.335	10.763	1	95007			6364	10099	4409	4415	7384	7384					0.059515538853929684
EILTLLQGVHQ	11	Unmodified	_EILTLLQGVHQ_					0	0	0		ENST00000467324.5_1_2:122513466-122522940:+|nuORF;ENSG00000211460|ENST00000389682|TSN;ENST00000483698.5_1_2:122513280-122515022:+|nuORF;nc|ENSG00000211460|Q15631-2|TSN	ENST00000467324.5_1_2:122513466-122522940:+|nuORF	ENST00000467324.5_1_2:122513466-122522940:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.5755310058594	3	417.574955	1249.70304	0.014011	5.8505E-06	1.2442	0.00051954	1.2582	0.0005254	417.57545004424423	21.793	0.92327	21.165	20.804	21.727	-0.62835					70	23	4	0	0	0	0.7144	1	864	864		25.892	0	1	1387700			6365	8566	4410	4416	7385	7385					0.08817330631677578
EINEELKRVR	10	Unmodified	_EINEELKRVR_					0	0	0			REV__nc|ENSG00000164989|Q6TFL3-3|CCDC171	REV__nc|ENSG00000164989|Q6TFL3-3|CCDC171	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.3718872070312	2	643.364776	1284.715	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.27	1	115.22	114.72	115.72	-0.05722								0	0	0	0.45132	1	12352	12352		39.253	5.3312	1		+		6366	21138	4411	4417	7386	7386					0.08402947374838732
EINGKLVKSIF	11	Unmodified	_EINGKLVKSIF_					0	0	0		nc|ENSG00000135457|Q12800-2|TFCP2;nc|ENSG00000135457|Q12800-3|TFCP2;nc|ENSG00000135457|Q12800-4|TFCP2;ENSG00000135457|ENST00000257915|TFCP2	nc|ENSG00000135457|Q12800-2|TFCP2	nc|ENSG00000135457|Q12800-2|TFCP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	625.3681640625	2	624.371538	1246.72852	-0.25475	-0.00015906	-0.30017	-0.00018742	-0.55492	-0.00034648	624.3714125777495	103.16	0.60635	103.17	102.88	103.48	0.0082016					26	14	2	0	0	0	0.17457	1	11093	11093		35.152	0.97948	1	1784800			6367	4025	4412	4418	7387	7387					0.11502805154077578
EINGKLVKSIF	11	Unmodified	_EINGKLVKSIF_					0	0	0		nc|ENSG00000135457|Q12800-2|TFCP2;nc|ENSG00000135457|Q12800-3|TFCP2;nc|ENSG00000135457|Q12800-4|TFCP2;ENSG00000135457|ENST00000257915|TFCP2	nc|ENSG00000135457|Q12800-2|TFCP2	nc|ENSG00000135457|Q12800-2|TFCP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	625.3681640625	2	624.371538	1246.72852	-1.2101	-0.00075553	0.99013	0.00061821	-0.21993	-0.00013732	624.3721821653843	102.95	0.78063	103.07	102.79	103.57	0.11495					31	19	2	0	0	0	0.17387	1	10831	10831		37.812	1.3648	1	3226600			6368	4025	4412	4418	7388	7388					0.11502805154077578
EINHAEDL	8	Unmodified	_EINHAEDL_					0	0	0			REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.2239990234375	2	470.722164	939.429775	-0.31515	-0.00014835	0.96632	0.00045487	0.65117	0.00030652	470.7225235132023	20.393	0.37282	20.324	20.149	20.522	-0.069733					22	15	2	0	0	0	0.85277	1	518	518		25.45	0	1	34459	+		6369	29873	4413	4419	7389	7389					-0.04236272758578252
EINIEFDN	8	Unmodified	_EINIEFDN_					0	0	0			REV__nc|ENSG00000011426|Q9NQW6-2|ANLN	REV__nc|ENSG00000011426|Q9NQW6-2|ANLN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7950439453125	2	497.229822	992.445091	-1.2598	-0.00062641	0.086251	4.2886E-05	-1.1736	-0.00058353	497.22995562482294	46.4	0.36594	46.871	46.614	46.98	0.4714					12	8	2	0	0	0	0.4196	1	4379	4379		20.947	0.95016	1	274720	+		6370	16185	4414	4420	7390	7390					-0.051434059613711725
EINQYSLDNE	10	Unmodified	_EINQYSLDNE_					0	0	0			REV__ENST00000444273.6_1_6:56954967-57015704:+|nuORF	REV__ENST00000444273.6_1_6:56954967-57015704:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.8798217773438	2	612.772582	1223.53061	0.27947	0.00017125	0.66779	0.0004092	0.94726	0.00058045	612.7721276210959	105.06	0.21819	105.1	105.04	105.25	0.038322					5	4	2	0	0	0	0.37624	1	11471	11471		37.812	8.662	1	13948	+		6371	17924	4415	4421	7391	7391					-0.07221285566356528
EIPGTIKSSSD	11	Unmodified	_EIPGTIKSSSD_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3299560546875	2	567.287868	1132.56118	0.48096	0.00027284	4.2599	0.0024166	4.7409	0.0026894	567.2909862892843	92.287	0.12671	92.509	92.404	92.531	0.22157					4	2	2	0	0	0	0.17574	1	9328	9328		41.427	5.8083	1	97602			6372	8534	4416	4422	7392	7392					0.0002049281868039543
EIPIAVKV	8	Unmodified	_EIPIAVKV_					0	0	0			REV__ENSG00000150760|ENST00000623213|DOCK1	REV__ENSG00000150760|ENST00000623213|DOCK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.779541015625	2	434.778754	867.542954	0.62535	0.00027189	2.2611	0.00098306	2.8864	0.0012549	434.77966055046767	57.02	3.6636	57.575	56.537	60.201	0.55513					134	89	2	0	0	0	0.80706	1	5925	5925		19.36	1.995	1	401240	+		6373	20220	4417	4423	7393	7393					0.10388447425293634
EIPLQLVTV	9	Unmodified	_EIPLQLVTV_					0	0	0		ENST00000465379.1_1_2:174774671-174778005:-|nuORF;nc|ENSG00000172845|Q02447-4|SP3;nc|ENSG00000172845|Q02447-3|SP3;nc|ENSG00000172845|Q02447-5|SP3;nc|ENSG00000172845|Q02447-6|SP3;nc|ENSG00000172845|Q02447-2|SP3;ENSG00000172845|ENST00000310015|SP3	ENST00000465379.1_1_2:174774671-174778005:-|nuORF	ENST00000465379.1_1_2:174774671-174778005:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.26641845703125	2	506.307875	1010.6012	1.717	0.00086932	0.68259	0.0003456	2.3996	0.0012149	506.30815312532576	50.926	0.94343	51.678	51.12	52.063	0.75174					31	22	2	0	0	0	0.20789	1	5093	5093		40.778	9.2484	1	190690			6374	6801	4418	4424	7394	7394					0.09632084279905939
EIPQRSQTP	9	Unmodified	_EIPQRSQTP_					0	0	0		ENST00000476577.5_1_22:32010650-32011059:+|nuORF	ENST00000476577.5_1_22:32010650-32011059:+|nuORF	ENST00000476577.5_1_22:32010650-32011059:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.2739868164062	2	528.277638	1054.54072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.629	1	30.654	30.154	31.154	0.025013								0	0	0	0.28772	1	1599	1599		35.618	2.1027	1				6375	12342	4419	4425	7395	7395					0.01563366949540068
EIPRREEKSK	10	Unmodified	_EIPRREEKSK_					0	0	0		nc|ENSG00000149488|Q8TDI7-3|TMC2;ENSG00000149488|ENST00000358864|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.5605163574219	3	424.573726	1270.69935	-0.27491	-0.00011672	-1.9485	-0.00082726	-2.2234	-0.00094398	424.57295770282843	27.651	0.61329	27.554	27.272	27.885	-0.096947					18	13	3	0	0	0	0.37624	1	1649	1649		17.167	0	1	63968			6376	5030	4420	4426	7396	7396					0.07482660857795054
EIQAAIKVRLA	11	Unmodified	_EIQAAIKVRLA_					0	0	0		ENST00000525312.1_1_11:12883807-12886442:+|nuORF	ENST00000525312.1_1_11:12883807-12886442:+|nuORF	ENST00000525312.1_1_11:12883807-12886442:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.92352294921875	3	404.587195	1210.73976	0.19518	7.8965E-05	3.7752	0.0015274	3.9704	0.0016064	404.92321041064025	41.02	1.204	41.094	40.422	41.626	0.073414					55	39	2	0	0	0	0.74771	1	2602	2602		22.562	0.78116	1	249770			6377	13234	4421	4427	7397	7397					0.14281627248237783
EIQCSTAHQYP	11	Unmodified	_EIQCSTAHQYP_					0	0	0			REV__ENST00000420353.6_1_12:53910483-53910921:-|nuORF	REV__ENST00000420353.6_1_12:53910483-53910921:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.19244384765625	3	426.192405	1275.55539	0.012697	5.4114E-06	0.44621	0.00019017	0.4589	0.00019558	426.19255406795077	18.211	0.55684	18.277	18.098	18.655	0.066298					60	28	3	0	0	0	0.54689	1	303	303		48.602	19.051	1	264690	+		6378	26485	4422	4428	7398	7398					-0.07136928964632716
EIQCSTAHQYP	11	Unmodified	_EIQCSTAHQYP_					0	0	0			REV__ENST00000420353.6_1_12:53910483-53910921:-|nuORF	REV__ENST00000420353.6_1_12:53910483-53910921:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	426.192405	1275.55539	-0.40521	-0.0001727	1.487	0.00063376	1.0818	0.00046106	426.1933297912678	18.404	0.22256	18.328	18.182	18.404	-0.076712	-0.018828	0.00082993	NaN	48.602	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14818	+		6379	26485	4422	4428							-0.07136928964632716
EIQCSTAHQYP	11	Unmodified	_EIQCSTAHQYP_					0	0	0			REV__ENST00000420353.6_1_12:53910483-53910921:-|nuORF	REV__ENST00000420353.6_1_12:53910483-53910921:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	426.192405	1275.55539	0.52668	0.00022447	-0.36761	-0.00015667	0.15907	6.7794E-05	426.19224724455324	18.248	0.59749	18.224	18.002	18.6	-0.024033	-0.12258	-0.0015414	NaN	48.602	48	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	245110	+		6380	26485	4422	4428							-0.07136928964632716
EIQCSTAHQYP	11	Unmodified	_EIQCSTAHQYP_					0	0	0			REV__ENST00000420353.6_1_12:53910483-53910921:-|nuORF	REV__ENST00000420353.6_1_12:53910483-53910921:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	426.192405	1275.55539	0.33077	0.00014097	-0.24212	-0.00010319	0.088646	3.778E-05	426.1923152894037	19.196	0.4885	18.566	18.358	18.847	-0.6296	0.21971	-0.0013809	NaN	48.602	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26844	+		6381	26485	4422	4428							-0.07136928964632716
EIQDLSKLMY	10	Unmodified	_EIQDLSKLMY_					0	0	0			REV__ENSG00000160396|ENST00000291823|HIPK4	REV__ENSG00000160396|ENST00000291823|HIPK4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.9324951171875	3	413.881168	1238.62167	0.1493	6.1793E-05	2.4244	0.0010034	2.5737	0.0010652	413.88217997793106	44.395	0.77404	44.371	44.014	44.788	-0.023079					37	17	3	0	0	0	0.37624	1	3493	3493		32.751	10.97	1	228020	+		6382	20716	4423	4429	7399	7399					0.01190886877407138
EIQKIIEVYY	10	Unmodified	_EIQKIIEVYY_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	649.3558959960938	2	649.355554	1296.69655	-0.52187	-0.00033888	1.3082	0.00084948	0.78632	0.0005106	649.356419556826	84.149	0.68206	84.584	84.299	84.981	0.43538					31	16	2	0	0	0	0.6116	1	9797	9797		49.442	15.52	1	863310			6383	14698	4424	4430	7400	7400					0.06007392680294288
EIQKIIEVYY	10	Unmodified	_EIQKIIEVYY_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	649.357421875	2	649.355554	1296.69655	1.604	0.0010416	-0.80793	-0.00052464	0.79604	0.00051691	649.3550433975204	84.215	0.84901	84.662	84.266	85.115	0.44736					35	20	2	0	0	0	0.51302	1	9842	9842		54.776	5.3348	1	867700			6384	14698	4424	4430	7401	7401					0.06007392680294288
EIQKLRNQL	9	Unmodified	_EIQKLRNQL_					0	0	0		nc|ENSG00000066455|Q8TBA6-2|GOLGA5;ENSG00000066455|ENST00000163416|GOLGA5	nc|ENSG00000066455|Q8TBA6-2|GOLGA5	nc|ENSG00000066455|Q8TBA6-2|GOLGA5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.148193359375	2	571.33803	1140.66151	1.8783	0.0010731	-2.4342	-0.0013907	-0.55585	-0.00031758	571.3370173593094	35.986	0.92073	36.426	36.112	37.033	0.44043					52	22	3	0	0	0	0.20789	1	2837	2837		37.812	4.9991	1	173680			6385	1161	4425	4431	7402	7402					0.09680194662996655
EIQKSALQIII	11	Unmodified	_EIQKSALQIII_					0	0	0		nc|ENSG00000145041|Q9Y4B6-3|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;ENSG00000145041|ENST00000684031|DCAF1	nc|ENSG00000145041|Q9Y4B6-3|DCAF1	nc|ENSG00000145041|Q9Y4B6-3|DCAF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.385498046875	2	628.384645	1254.75474	1.0191	0.00064038	0.55467	0.00034855	1.5738	0.00098893	628.3848003182829	112.92	0.77937	112.95	112.71	113.49	0.028847					28	20	2	0	0	0	0.1729	1	12359	12359		14.137	0	1	2883400			6386	4746	4426	4432	7403	7403					0.13755074325581518
EIQKYTKKI	9	Unmodified	_EIQKYTKKI_					0	0	0			REV__ENSG00000119285|ENST00000366582|HEATR1	REV__ENSG00000119285|ENST00000366582|HEATR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8438720703125	2	575.845156	1149.67576	-0.49921	-0.00028747	-3.2743	-0.0018855	-3.7735	-0.002173	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.7932	1	8710	8710		26.693	1.1189	1	1518700	+		6387	18347	4427	4433	7404	7404					0.10690847091291289
EIQLALFVV	9	Unmodified	_EIQLALFVV_					0	0	0		ENSG00000198965|ENST00000641067|OR10R2;nc|ENSG00000198965|Q8NGX6|OR10R2	ENSG00000198965|ENST00000641067|OR10R2	ENSG00000198965|ENST00000641067|OR10R2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3162231445312	2	516.310418	1030.60628	3.1012	0.0016012	3.8274	0.0019761	6.9286	0.0035773	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.7932	1	13227	13227		25.45	3.4903	1	1162600			6388	8384	4428	4434	7405	7405					0.09220388142512093
EIQLDKALVPK	11	Unmodified	_EIQLDKALVPK_					0	0	0		nc|ENSG00000156042|Q5T0N1-2|CFAP70;nc|ENSG00000156042|Q5T0N1|CFAP70;ENSG00000156042|ENST00000355577|CFAP70;ENST00000493787.5_1_10:75056784-75072389:-|nuORF	nc|ENSG00000156042|Q5T0N1-2|CFAP70	nc|ENSG00000156042|Q5T0N1-2|CFAP70	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3854370117188	2	627.37682	1252.73909	6.5832	0.0041301	2.6289	0.0016493	9.2121	0.0057794	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.76322	1	13771	13771		19.104	0.84144	1	94412			6389	5360	4429	4435	7406	7406					0.12282787808499052
EIQLILPTRAR	11	Unmodified	_EIQLILPTRAR_					0	0	0		nc|ENSG00000133256|P35913-3|PDE6B;nc|ENSG00000133256|P35913-2|PDE6B;ENSG00000133256|ENST00000496514|PDE6B	nc|ENSG00000133256|P35913-3|PDE6B	nc|ENSG00000133256|P35913-3|PDE6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.60247802734375	3	437.269866	1308.78777	-0.53561	-0.00023421	-3.9588	-0.0017311	-4.4944	-0.0019653	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.73277	1	4311	4311		25.892	7.3607	1	4132000			6390	3869	4430	4436	7407	7407					0.14572701168253843
EIQLPSLP	8	Unmodified	_EIQLPSLP_					0	0	0			REV__ENST00000477540.1_1_17:21215348-21217539:+|nuORF	REV__ENST00000477540.1_1_17:21215348-21217539:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.2579040527344	2	448.758018	895.501483	1.2659	0.00056808	4.4691	0.0020055	5.735	0.0025736	448.76007851051776	87.275	1.2967	87.328	86.822	88.118	0.053032					36	29	2	0	0	0	0.4196	1	8931	8931		31.955	1.4512	1	161860	+		6391	27360	4431	4437	7408	7408					0.049552666659678835
EIQLSPLN	8	Unmodified	_EIQLSPLN_					0	0	0			REV__ENSG00000074356|ENST00000389005|NCBP3	REV__ENSG00000074356|ENST00000389005|NCBP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2640686035156	2	457.2531	912.491647	0.59507	0.0002721	-1.7032	-0.0007788	-1.1081	-0.0005067	457.2523409397682	82.369	0.25391	82.514	82.418	82.672	0.1455					6	5	2	0	0	0	0.4196	1	7955	7955		37.812	2.1932	1	37858	+		6392	16689	4432	4438	7409	7409					0.03190078660566087
EIQVKTVSDKN	11	Unmodified	_EIQVKTVSDKN_					0	0	0			REV__ENSG00000216937|ENST00000639629|CCDC7	REV__ENSG00000216937|ENST00000639629|CCDC7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	630.8491821289062	2	630.843342	1259.67213	6.6109	0.0041705	2.8483	0.0017968	9.4592	0.0059673	630.8449691217351	110.19	0.61125	110.25	110.05	110.66	0.068001					45	21	3	0	0	0	0.7144	1	13385	13385		29.17	1.0886	1	1789400	+		6393	23696	4433	4439	7410	7410					0.052681325267712964
EIQWGIPI	8	Unmodified	_EIQWGIPI_					0	0	0		ENSG00000205108|ENST00000378788|FAM205A	ENSG00000205108|ENST00000378788|FAM205A	ENSG00000205108|ENST00000378788|FAM205A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.5867614746094	2	478.26601	954.517468	-0.68126	-0.00032582	2.6597	0.001272	1.9784	0.0009462	478.2676537764481	48.813	1.2089	49.718	48.925	50.133	0.90424					47	29	2	0	0	0	0.4196	1	4743	4743		50.025	0	1	729070			6394	8511	4434	4440	7411	7411					0.0383897290286086
EIRDRDGGM	9	Oxidation (M)	_EIRDRDGGM(Oxidation (M))_		EIRDRDGGM(1)		EIRDRDGGM(59)	0	0	1		ENSG00000204941|ENST00000342951|PSG5;ENST00000600817.5_1_19:43679971-43690557:-|nuORF	ENSG00000204941|ENST00000342951|PSG5	ENSG00000204941|ENST00000342951|PSG5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.742919921875	2	532.743105	1063.47166	0.4592	0.00024463	2.1827	0.0011628	2.6419	0.0014074	532.7443523286827	51.024	0.62087	51.459	51.161	51.781	0.43505					23	14	2	0	0	0	0.38563	1	5048	5048		58.782	12.81	1	397360			6395	8499	4435	4441	7412	7412		147			-0.057540403416851404
EIREQWQIL	9	Unmodified	_EIREQWQIL_					0	0	0			REV__nc|ENSG00000115464|Q70CQ2-3|USP34	REV__nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.256591796875	3	405.555784	1213.64552	-1.4148	-0.00057377	3.6782	0.0014917	2.2634	0.00091793	405.5572786566047	44.158	0.84853	45.002	44.653	45.501	0.84438					33	20	2	0	0	0	0.20789	1	4051	4051		18.262	0	1	201560	+		6396	18123	4436	4442	7413	7413					0.04724488426109019
EIREVGPVNK	10	Unmodified	_EIREVGPVNK_					0	0	0		ENSG00000044524|ENST00000336596|EPHA3;nc|ENSG00000044524|P29320-2|EPHA3	ENSG00000044524|ENST00000336596|EPHA3	ENSG00000044524|ENST00000336596|EPHA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.8240966796875	2	570.822212	1139.62987	-0.23349	-0.00013328	3.926	0.0022411	3.6925	0.0021078	570.8242504843668	61.573	0.86258	61.603	61.338	62.201	0.029575					86	37	3	0	0	0	0.8651	1	5733	5733		25.574	2.5316	1	572170			6397	949	4437	4443	7414	7414					0.06564201909031908
EIRIIPAKKYV	11	Unmodified	_EIRIIPAKKYV_					0	0	0		ENSG00000116133|ENST00000371269|DHCR24;nc|ENSG00000116133|Q15392-2|DHCR24	ENSG00000116133|ENST00000371269|DHCR24	ENSG00000116133|ENST00000371269|DHCR24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	443.94873046875	3	443.946612	1328.81801	0.74556	0.00033099	3.6198	0.001607	4.3654	0.001938	443.9481188888374	107.16	1.4993	107.25	106.38	107.88	0.091263					116	35	4	0	0	0	0.74022	1	11540	11540		24.232	1.6702	1	2920200			6398	2901	4438	4444	7415	7415					0.16675059833460182
EIRKPEVL	8	Unmodified	_EIRKPEVL_					0	0	0		ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-2|CASP9;nc|ENSG00000132906|P55211-4|CASP9;nc|ENSG00000132906|P55211-3|CASP9	ENSG00000132906|ENST00000333868|CASP9	ENSG00000132906|ENST00000333868|CASP9	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.2936096191406	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.244	1	62.211	61.711	62.711	-0.033173								0	0	0	0.31054	1	5895	5895		47.657	3.5405	1				6399	3838	4439	4445	7416	7416					0.08914333339953373
EIRPNIGTDT	10	Unmodified	_EIRPNIGTDT_					0	0	0			REV__nc|ENSG00000138798|P01133-2|EGF	REV__nc|ENSG00000138798|P01133-2|EGF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.29150390625	2	558.288202	1114.56185	2.2517	0.0012571	0.070447	3.933E-05	2.3222	0.0012965	558.2897837281895	105.54	0.7603	105.69	105.14	105.9	0.15584					53	18	4	0	0	0	0.86587	1	12857	12857		29.17	2.4771	1	592990	+		6400	19508	4440	4446	7417	7417					0.00915332258387025
EIRVNIRKAL	10	Unmodified	_EIRVNIRKAL_					0	0	0			REV__ENST00000483765.5_1_13:27827977-27830662:+|nuORF	REV__ENST00000483765.5_1_13:27827977-27830662:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.5888366699219	3	404.59094	1210.75099	-1.3096	-0.00052987	-2.8286	-0.0011444	-4.1383	-0.0016743	404.5896495246431	39.318	1.9056	39.271	38.511	40.416	-0.047005					116	44	4	0	0	0	0.85834	1	2846	2846		22.58	3.317	1	380940	+		6401	18477	4441	4447	7418	7418					0.15404449342372573
EIRVNIRKAL	10	Unmodified	_EIRVNIRKAL_					0	0	0			REV__ENST00000483765.5_1_13:27827977-27830662:+|nuORF	REV__ENST00000483765.5_1_13:27827977-27830662:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.5892028808594	3	404.59094	1210.75099	0.17885	7.236E-05	-4.4578	-0.0018036	-4.2789	-0.0017312	404.5890516543303	39.161	1.4029	39.25	38.65	40.053	0.088371					99	37	3	0	0	0	0.86151	1	2370	2370		15.333	1.2471	1	306250	+		6402	18477	4441	4447	7419	7419					0.15404449342372573
EISFGGCL	8	Unmodified	_EISFGGCL_					0	0	0		ENSG00000180974|ENST00000641726|OR52E4;ENSG00000181609|ENST00000322641|OR52D1	ENSG00000180974|ENST00000641726|OR52E4	ENSG00000180974|ENST00000641726|OR52E4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7461853027344	2	413.194196	824.37384	-0.18723	-7.7364E-05	-0.84764	-0.00035024	-1.0349	-0.0004276	413.1937663511514	85.64	2.721	85.707	84.549	87.27	0.067261					129	62	3	0	0	0	0.4196	1	8507	8507		8.8223	0	1	1496400			6403	7363	4442	4448	7420	7420					-0.045371971997155924
EISGLFHF	8	Unmodified	_EISGLFHF_					0	0	0			REV__ENSG00000197309|ENST00000641351|OR10D3	REV__ENSG00000197309|ENST00000641351|OR10D3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.7187194824219	2	475.242535	948.470518	0.30067	0.00014289	0.60107	0.00028566	0.90174	0.00042855	475.2404448429278	23.798	0.38161	23.224	23.052	23.433	-0.57415					21	8	4	0	0	0	0.4196	1	1091	1091		19.36	3.7182	1	102300	+		6404	23218	4443	4449	7421	7421					-0.005778866482842204
EISGLFHF	8	Unmodified	_EISGLFHF_					0	0	0			REV__ENSG00000197309|ENST00000641351|OR10D3	REV__ENSG00000197309|ENST00000641351|OR10D3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	475.242535	948.470518	0.85338	0.00040556	-4.9971	-0.0023748	-4.1437	-0.0019693	475.24015915358615	23.906	0.38036	23.524	23.327	23.707	-0.38178	0.15002	-0.00088948	NaN	19.36	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51721	+		6405	23218	4443	4449							-0.005778866482842204
EISILLLGV	9	Unmodified	_EISILLLGV_					0	0	0		ENST00000573763.1_1_17:1675146-1678370:+|nuORF;ENSG00000132386|ENST00000254722|SERPINF1	ENST00000573763.1_1_17:1675146-1678370:+|nuORF	ENST00000573763.1_1_17:1675146-1678370:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8058166503906	2	478.804968	955.595384	0.30032	0.0001438	1.2686	0.0006074	1.5689	0.0007512	478.8054155827557	41.804	1.1764	41.773	41.067	42.244	-0.030991					72	29	3	0	0	0	0.7932	1	3009	3009		19.36	1.0356	1	345190			6406	3791	4444	4450	7422	7422					0.11580985768239316
EISQAFSKRN	10	Unmodified	_EISQAFSKRN_					0	0	0		nc|ENSG00000109667|Q9NRM0-2|SLC2A9;ENSG00000109667|ENST00000264784|SLC2A9;ENST00000512342.5_1_4:9800851-9889242:-|nuORF;ENST00000503280.5_1_4:9800851-9909967:-|nuORF;ENST00000503803.5_1_4:9781600-9889242:-|nuORF	nc|ENSG00000109667|Q9NRM0-2|SLC2A9	nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.3084106445312	2	590.309469	1178.60439	0.30484	0.00017995	-0.43313	-0.00025568	-0.12829	-7.5732E-05	590.3091273196425	32.679	0.65199	32.625	32.317	32.969	-0.054337					30	14	3	0	0	0	0.86218	1	1941	1941		32.812	0	1	144860			6407	2472	4445	4451	7423	7423					0.022227273866292308
EISSDSHAP	9	Unmodified	_EISSDSHAP_					0	0	0		ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2366638183594	2	471.711796	941.40904	0.59964	0.00028286	-0.95198	-0.00044906	-0.35234	-0.0001662	471.7113686492953	33.593	0.49879	33.763	33.568	34.067	0.16971					17	11	3	0	0	0	0.20789	1	2471	2471		40.573	1.7665	1	160020			6408	8422	4446	4452	7424	7424					-0.06400863138230761
EISSDSHAP	9	Unmodified	_EISSDSHAP_					0	0	0		ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	471.711796	941.40904	0.35357	0.00016678	-0.07266	-3.4275E-05	0.28091	0.00013251	471.7116825813994	33.638	0.501	33.943	33.575	34.076	0.30494	0.090009	0.00063764	NaN	40.573	13	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206130			6409	8422	4446	4452							-0.06400863138230761
EISSLPDGTTF	11	Unmodified	_EISSLPDGTTF_					0	0	0		ENSG00000080298|ENST00000617270|RFX3;nc|ENSG00000080298|P48380-2|RFX3;nc|ENSG00000080298|P48380-3|RFX3	ENSG00000080298|ENST00000617270|RFX3	ENSG00000080298|ENST00000617270|RFX3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	583.2952270507812	2	583.782418	1165.55028	-0.94829	-0.00055359	2.4776	0.0014464	1.5294	0.00089281	583.7842877869075	57.073	0.32693	57.073	56.957	57.284	0					17	13	2	0	0	0	0.17226	1	4895	4895		35.152	15.155	1	59249			6410	1438	4447	4453	7425	7425					-0.025869095556117827
EITAKNGRI	9	Unmodified	_EITAKNGRI_					0	0	0		ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904357910156	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.67345	3	9168	8811;8835;9168		42.396	5.237	1	9565500			6411	4081	4448	4454	7426;7427;7428	7428					0.06628261191815454
EITAKNGRI	9	Unmodified	_EITAKNGRI_					0	0	0		ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2903747558594	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.71772	1	9016	9016		39.253	3.6345	1	9883700			6412	4081	4448	4454	7429	7429					0.06628261191815454
EITAKNGRI	9	Unmodified	_EITAKNGRI_					0	0	0		ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2903137207031	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.76764	1	8702	8702		34.173	1.3601	1	9566900			6413	4081	4448	4454	7430	7430					0.06628261191815454
EITFAKLLKD	10	Unmodified	_EITFAKLLKD_					0	0	0		ENSG00000101846|ENST00000674429|STS;nc|ENSG00000101846|P08842|STS	ENSG00000101846|ENST00000674429|STS	ENSG00000101846|ENST00000674429|STS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3429565429688	2	589.344989	1176.67542	0.71715	0.00042265	-3.7579	-0.0022147	-3.0408	-0.0017921	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.86698	1	10956	10956		28.081	0	1	2439600			6414	1964	4449	4455	7431	7431					0.09415427371413898
EITKGVLVELV	11	Unmodified	_EITKGVLVELV_					0	0	0			REV__nc|ENSG00000130363|Q86UC2|RSPH3	REV__nc|ENSG00000130363|Q86UC2|RSPH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.24554443359375	3	400.579706	1198.71729	3.4047	0.0013639	-1.6398	-0.00065689	1.7649	0.00070698	400.578997947783	111.61	0.85251	111.65	111	111.85	0.041832					50	28	2	0	0	0	0.75121	1	13476	13476		21.78	3.9473	1	3662700	+		6415	29838	4450	4456	7432	7432					0.1258798305993878
EITKNRVKSLR	11	Unmodified	_EITKNRVKSLR_					0	0	0		ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-3|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.6095886230469	3	448.60877	1342.80448	0.51142	0.00022943	0.77739	0.00034875	1.2888	0.00057817	448.60891312566025	75.185	1.0571	75.23	74.705	75.762	0.04509					87	28	4	0	0	0	0.7896	1	7277	7277		13.508	0.55046	1	364530			6416	1253	4451	4457	7433	7433					0.14679202054207963
EITKNRVKSLR	11	Unmodified	_EITKNRVKSLR_					0	0	0		ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-3|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.9446716308594	3	448.60877	1342.80448	0.6314	0.00028325	0.36355	0.00016309	0.99495	0.00044634	448.60887470875934	77.01	0.99304	77.058	76.682	77.675	0.047981					82	45	2	0	0	0	0.76892	2	7527	7527;7555		17.833	0.63689	1	702210			6417	1253	4451	4457	7434;7435	7434					0.14679202054207963
EITKNRVKSLR	11	Unmodified	_EITKNRVKSLR_					0	0	0		ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-3|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.6090393066406	3	448.60877	1342.80448	0.53519	0.00024009	0.84556	0.00037932	1.3808	0.00061942	448.6089733377508	76.693	0.99095	76.828	76.468	77.459	0.13478					122	48	3	0	0	0	0.75457	1	7229	7229		21.032	3.8655	1	670390			6418	1253	4451	4457	7436	7436					0.14679202054207963
EITKNRVKSLR	11	Unmodified	_EITKNRVKSLR_					0	0	0		ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-3|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.6087646484375	3	448.60877	1342.80448	-1.3262	-0.00059493	2.6509	0.0011892	1.3248	0.00059431	448.6097359452046	75.096	1.0894	75.184	74.756	75.846	0.087631					82	27	5	0	0	0	0.78351	2	6937	6926;6937		14.779	0.69279	1	417120			6419	1253	4451	4457	7437;7438	7438					0.14679202054207963
EITKNRVKSLR	11	Unmodified	_EITKNRVKSLR_					0	0	0		ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-3|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.6085205078125	3	448.60877	1342.80448	-1.3856	-0.00062161	2.5639	0.0011502	1.1783	0.00052859	448.609746420413	76.801	0.97182	76.89	76.464	77.435	0.089363					88	45	3	0	0	0	0.75779	1	7168	7168		20.315	1.784	1	651130			6420	1253	4451	4457	7439	7439					0.14679202054207963
EITPIKKHTAS	11	Unmodified	_EITPIKKHTAS_					0	0	0			REV__ENSG00000169131|ENST00000335815|ZNF354A	REV__ENSG00000169131|ENST00000335815|ZNF354A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.8794555664062	2	612.85097	1223.68739	1.1703	0.0007172	2.3768	0.0014566	3.5471	0.0021738	612.8521555725154	104.98	0.12584	105.14	105.04	105.17	0.15925					4	2	2	0	0	0	0.17347	1	11160	11160		36.447	17.184	1	65003	+		6421	21554	4452	4458	7440	7440					0.08449044114627213
EITPPVVLRL	10	Unmodified	_EITPPVVLRL_					0	0	0		ENST00000518587.1_1_5:170814889-170819841:+|nuORF;nc|ENSG00000181163|P06748-3|NPM1;nc|ENSG00000181163|P06748-2|NPM1;ENSG00000181163|ENST00000296930|NPM1;ENST00000502784.2_1_5:93019019-93019256:-|nuORF;ENST00000434232.1_1_7:36858782-36858980:+|nuORF;ENST00000412580.1_1_2:122466160-122466664:-|nuORF	ENST00000518587.1_1_5:170814889-170819841:+|nuORF;ENST00000412580.1_1_2:122466160-122466664:-|nuORF	ENST00000518587.1_1_5:170814889-170819841:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8535766601562	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.77314	1	11069	11069		40.778	6.6056	1	50786000			6422	7374;11340	4453	4459	7441	7441					0.1340743747093711
EIVKAAKAPVK	11	Unmodified	_EIVKAAKAPVK_					0	0	0		ENST00000471144.1_1_20:47852884-47860241:+|nuORF;ENST00000484427.5_1_20:47852594-47860368:+|nuORF;ENSG00000124228|ENST00000618172|DDX27;nc|ENSG00000124228|Q96GQ7|DDX27	ENST00000471144.1_1_20:47852884-47860241:+|nuORF	ENST00000471144.1_1_20:47852884-47860241:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.3661499023438	2	577.368798	1152.72304	-0.96039	-0.0005545	-2.9913	-0.0017271	-3.9517	-0.0022816	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.7144	2	11064	11052;11064		29.17	2.4771	1	9850700			6423	3323	4454	4460	7442;7443	7443					0.15279126362247553
EIVKAAKAPVK	11	Unmodified	_EIVKAAKAPVK_					0	0	0		ENST00000471144.1_1_20:47852884-47860241:+|nuORF;ENST00000484427.5_1_20:47852594-47860368:+|nuORF;ENSG00000124228|ENST00000618172|DDX27;nc|ENSG00000124228|Q96GQ7|DDX27	ENST00000471144.1_1_20:47852884-47860241:+|nuORF	ENST00000471144.1_1_20:47852884-47860241:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3660888671875	2	577.368798	1152.72304	-1.363	-0.00078696	-2.7149	-0.0015675	-4.0779	-0.0023544	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.69248	1	10646	10646		32.751	0.79567	1	14386000			6424	3323	4454	4460	7444	7444					0.15279126362247553
EIVLDISSRA	10	Unmodified	_EIVLDISSRA_					0	0	0		ENSG00000100814|ENST00000358932|CCNB1IP1	ENSG00000100814|ENST00000358932|CCNB1IP1	ENSG00000100814|ENST00000358932|CCNB1IP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	551.8118896484375	2	551.808771	1101.60299	0.23073	0.00012732	3.9177	0.0021618	4.1484	0.0022891	551.8104731405762	80.967	0.47394	81.104	80.793	81.267	0.13702					14	10	2	0	0	0	0.57924	1	7737	7737		51.193	13.381	1	65055			6425	1873	4455	4461	7445	7445					0.05625093297862804
EIVLDISSRA	10	Unmodified	_EIVLDISSRA_					0	0	0		ENSG00000100814|ENST00000358932|CCNB1IP1	ENSG00000100814|ENST00000358932|CCNB1IP1	ENSG00000100814|ENST00000358932|CCNB1IP1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	551.808771	1101.60299	-1.1982	-0.00066116	3.0672	0.0016925	1.869	0.0010314	552.3130000522826	80.944	0.41158	81.049	80.865	81.277	0.10527	-0.0271	-0.00059751	NaN	51.193	16	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65308			6426	1873	4455	4461							0.05625093297862804
EIVLSKFF	8	Unmodified	_EIVLSKFF_					0	0	0			REV__ENST00000547247.5_1_12:50479152-50482438:+|nuORF	REV__ENST00000547247.5_1_12:50479152-50482438:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7784729003906	2	491.784036	981.553519	-0.022145	-1.0891E-05	-3.7149	-0.0018269	-3.737	-0.0018378	491.7819409897417	50.275	0.86578	50.723	50.307	51.173	0.44761					50	20	4	0	0	0	0.92457	1	4965	4965		47.916	3.7988	1	1878200	+		6427	16516	4456	4462	7446	7446					0.06200430079718444
EIVMKSIVN	9	Unmodified	_EIVMKSIVN_					0	0	0		nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;ENSG00000139697|ENST00000602398|SBNO1	nc|ENSG00000139697|A3KN83-3|SBNO1	nc|ENSG00000139697|A3KN83-3|SBNO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7932739257812	2	516.791535	1031.56852	1.5571	0.00080467	2.1758	0.0011244	3.7328	0.0019291	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.58668	1	9260	9260		47.657	5.2612	1	834930			6428	4391	4457	4463	7447	7447					0.05399553885399655
EIVRPKDIIRA	11	Unmodified	_EIVRPKDIIRA_					0	0	0			REV__ENSG00000179918|ENST00000478753|SEPHS2	REV__ENSG00000179918|ENST00000478753|SEPHS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2663879394531	3	437.269866	1308.78777	-1.6775	-0.00073351	-2.9878	-0.0013065	-4.6653	-0.00204	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.74405	1	4671	4671		23.378	0.81632	1	2305800	+		6429	22364	4458	4464	7448	7448					0.1457270116827658
EIVRPKDIIRA	11	Unmodified	_EIVRPKDIIRA_					0	0	0			REV__ENSG00000179918|ENST00000478753|SEPHS2	REV__ENSG00000179918|ENST00000478753|SEPHS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2676696777344	3	437.269866	1308.78777	-0.68964	-0.00030156	-4.0468	-0.0017696	-4.7365	-0.0020711	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.75121	1	4844	4844		21.78	0.74819	1	2651700	+		6430	22364	4458	4464	7449	7449					0.1457270116827658
EIVSLLIEP	9	Unmodified	_EIVSLLIEP_					0	0	0			REV__nc|ENSG00000183023|P32418-3|SLC8A1	REV__nc|ENSG00000183023|P32418-3|SLC8A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.2523193359375	2	506.799883	1011.58521	-0.18718	-9.4862E-05	2.8443	0.0014415	2.6571	0.0013466	506.8013198261747	49.581	0.57322	50.04	49.582	50.155	0.45983					18	13	2	0	0	0	0.20789	1	4820	4820		23.042	5.6775	1	212320	+		6431	22568	4459	4465	7450	7450					0.0798837804301229
EIVVAKKSP	9	Unmodified	_EIVVAKKSP_					0	0	0		nc|ENSG00000020219|A6NM43|CCT8L1P;ENSG00000198445|ENST00000359963|CCT8L2	nc|ENSG00000020219|A6NM43|CCT8L1P	nc|ENSG00000020219|A6NM43|CCT8L1P	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2861022949219	2	485.800217	969.585882	0.37604	0.00018268	-1.9343	-0.00093969	-1.5583	-0.00075701	485.7991045902201	49.327	0.3609	50.174	50.037	50.398	0.84767					12	8	2	0	0	0	0.20789	1	4841	4841		24.519	0	1	149590			6432	8273	4460	4466	7451	7451					0.09987217482716915
EIVVFRLSI	9	Unmodified	_EIVVFRLSI_					0	0	0			REV__ENST00000471867.2_2_13:47349749-47349869:-|nuORF	REV__ENST00000471867.2_2_13:47349749-47349869:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.326171875	2	538.329142	1074.64373	0.070633	3.8024E-05	-4.4231	-0.0023811	-4.3525	-0.0023431	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.78983	1	10844	10844		27.882	3.6795	1	109840000	+		6433	27244	4461	4467	7452	7452					0.10939479408148145
EIVVFRLSI	9	Unmodified	_EIVVFRLSI_					0	0	0			REV__ENST00000471867.2_2_13:47349749-47349869:-|nuORF	REV__ENST00000471867.2_2_13:47349749-47349869:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3273315429688	2	538.329142	1074.64373	-1.4901	-0.00080219	-2.8806	-0.0015507	-4.3708	-0.0023529	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.76255	1	10689	10689		35.618	1.4457	1	93615000	+		6434	27244	4461	4467	7453	7453					0.10939479408148145
EIVVSEIAH	9	Unmodified	_EIVVSEIAH_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.21343994140625	2	498.771657	995.528761	3.6669	0.001829	-4.4523	-0.0022207	-0.78539	-0.00039173	498.76919965877	104.72	1.4372	104.94	104.47	105.91	0.2268					43	34	2	0	0	0	0.20789	1	12759	12759		37.159	15.199	1	92587	+		6435	17579	4462	4468	7454	7454					0.03081750206331435
EIVWLKDAQL	10	Unmodified	_EIVWLKDAQL_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.5650329589844	3	405.564168	1213.67067	-1.0529	-0.00042701	2.5673	0.0010412	1.5144	0.00061418	405.5651485487608	63.261	1.4207	63.284	62.805	64.225	0.022984					129	62	3	0	0	0	0.86272	2	5508	5508;5541		23.378	5.3948	1	264990			6436	4956	4463	4469	7455;7456	7455					0.0723854322866373
EIWLHKKCV	9	Unmodified	_EIWLHKKCV_					0	0	0		MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|14|3|sense	MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|14|3|sense	MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|14|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3199462890625	2	578.320794	1154.62703	-0.45444	-0.00026281	0.42665	0.00024674	-0.027788	-1.607E-05	578.3212868289457	92.787	2.7225	92.787	91.761	94.484	0					150	62	3	0	0	0	0.78536	1	9142	9142		29.15	1.2673	1	310260			6437	14720	4464	4470	7457	7457					0.05590655250534837
EIWLIQVA	8	Unmodified	_EIWLIQVA_					0	0	0			REV__ENST00000441021.5_1_3:44627626-44628653:+|nuORF	REV__ENST00000441021.5_1_3:44627626-44628653:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.2740173339844	2	486.28166	970.548768	0.96051	0.00046708	0.45515	0.00022133	1.4157	0.00068841	486.2815042205811	28.021	0.1773	27.767	27.676	27.853	-0.25465					5	3	2	0	0	0	0.4196	1	1675	1675		24.203	3.7209	1	32988	+		6438	26385	4465	4471	7458	7458					0.06231545936952898
EIYKNLSTLK	10	Unmodified	_EIYKNLSTLK_					0	0	0			REV__nc|ENSG00000173230|Q14789-4|GOLGB1	REV__nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.8453979492188	2	604.847896	1207.68124	-0.26186	-0.00015838	-2.5785	-0.0015596	-2.8403	-0.001718	604.8462755020705	96.346	2.6632	96.346	95.357	98.02	0					132	61	3	0	0	0	0.86471	1	9587	9587		30.318	0	1	263320	+		6439	21904	4466	4472	7459	7459					0.08570525883078517
EIYQPRGFN	9	Unmodified	_EIYQPRGFN_					0	0	0		ENSG00000160505|ENST00000301295|NLRP4;nc|ENSG00000160505|Q96MN2-2|NLRP4;nc|ENSG00000160505|Q96MN2-3|NLRP4	ENSG00000160505|ENST00000301295|NLRP4	ENSG00000160505|ENST00000301295|NLRP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.2806396484375	2	562.28018	1122.54581	-0.96118	-0.00054045	1.166	0.00065563	0.20485	0.00011518	562.2805396626987	38.88	0.60219	38.892	38.582	39.184	0.011173					29	13	3	0	0	0	0.7932	1	2710	2710		25.574	5.5773	1	83880			6440	5591	4467	4473	7460	7460					-0.010563291878497694
EKAAKELEKE	10	Unmodified	_EKAAKELEKE_					0	0	0		ENST00000529615.1_1_11:27359677-27371953:-|nuORF;ENSG00000109881|ENST00000328697|CCDC34	ENST00000529615.1_1_11:27359677-27371953:-|nuORF	ENST00000529615.1_1_11:27359677-27371953:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.8201293945312	2	587.819335	1173.62412	-0.87816	-0.0005162	0.45918	0.00026991	-0.41898	-0.00024629	587.8195252522253	47.464	0.70281	48.387	48.081	48.784	0.92315					47	17	4	0	0	0	0.47091	1	4557	4557		58.23	0	1	2875100			6441	2489	4468	4474	7461	7461					0.04425058606716448
EKAAKSKL	8	Unmodified	_EKAAKSKL_					0	0	0			REV__ENSG00000116685|ENST00000376572|KIAA2013	REV__ENSG00000116685|ENST00000376572|KIAA2013	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7711181640625	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.80706	1	2291	2291		19.36	1.0356	1	1151500	+		6442	18212	4469	4475	7462	7462					0.08654375277126292
EKAERKEEP	9	Unmodified	_EKAERKEEP_					0	0	0			REV__ENST00000508756.2_1_5:98204705-98207835:-|nuORF	REV__ENST00000508756.2_1_5:98204705-98207835:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.291259765625	2	558.288202	1114.56185	3.9256	0.0021916	-1.6745	-0.00093487	2.2511	0.0012567	558.2890747637853	105.47	0.58115	105.66	105.29	105.87	0.18647					53	13	5	0	0	0	0.7932	1	12890	12890		25.574	0	1	609290	+		6443	27933	4470	4476	7463	7463					0.00915332258387025
EKAESIDNVL	10	Unmodified	_EKAESIDNVL_					0	0	0			REV__ENSG00000203933|ENST00000370540|CXorf66	REV__ENSG00000203933|ENST00000370540|CXorf66	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.290283203125	2	559.290411	1116.56627	-0.060928	-3.4076E-05	-0.047323	-2.6468E-05	-0.10825	-6.0544E-05	559.2902950832719	77.079	1.0886	77.647	77.332	78.421	0.56836					71	26	4	0	0	0	0.19302	1	8812	8812		87.696	10.379	1	4085400	+		6444	23447	4471	4477	7464	7464					0.012647966812892264
EKAIKLRLD	9	Unmodified	_EKAIKLRLD_					0	0	0			REV__nc|ENSG00000072756|Q96Q11-2|TRNT1	REV__nc|ENSG00000072756|Q96Q11-2|TRNT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.8099365234375	2	543.337498	1084.66044	0.050862	2.7635E-05	0.34459	0.00018723	0.39545	0.00021486	543.3374877680246	16.453	0.22968	15.855	15.694	15.924	-0.59873					6	4	2	0	0	0	0.20789	1	138	138		40.058	4.9061	1	124030	+		6445	16654	4472	4478	7465	7465					0.12149980294066154
EKAKEKKKP	9	Unmodified	_EKAKEKKKP_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.803466796875	2	543.337498	1084.66044	-0.05437	-2.9541E-05	-0.38405	-0.00020867	-0.43841	-0.00023821	543.3373193901585	16.427	0.27617	15.94	15.821	16.098	-0.48719					10	5	3	0	0	0	0.20789	1	136	136		19.104	1.6355	1	85359			6446	5220	4473	4479	7466	7466					0.12149980294088891
EKALTSVQHSP	11	Unmodified	_EKALTSVQHSP_					0	0	0			REV__ENSG00000145362|ENST00000357077|ANK2	REV__ENSG00000145362|ENST00000357077|ANK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.8197021484375	2	598.817127	1195.6197	-0.25861	-0.00015486	3.252	0.0019474	2.9934	0.0017925	598.8191427631053	71.334	0.53845	71.295	70.984	71.522	-0.039001					36	25	2	0	0	0	0.52654	1	6930	6930		50.034	8.6069	1	137480	+		6447	19942	4474	4480	7467	7467					0.02971594183804882
EKALTSVQHSP	11	Unmodified	_EKALTSVQHSP_					0	0	0			REV__ENSG00000145362|ENST00000357077|ANK2	REV__ENSG00000145362|ENST00000357077|ANK2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	598.817127	1195.6197	-0.55429	-0.00033192	3.4351	0.002057	2.8808	0.0017251	598.8192924084227	71.422	0.39654	71.456	71.322	71.718	0.034004	0.13688	-0.00044792	NaN	50.034	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	126800	+		6448	19942	4474	4480							0.02971594183804882
EKAYLNAV	8	Unmodified	_EKAYLNAV_					0	0	0		nc|ENSG00000133107|Q9UBN4-4|TRPC4;nc|ENSG00000133107|Q9UBN4-3|TRPC4;nc|ENSG00000133107|Q9UBN4-2|TRPC4;ENSG00000133107|ENST00000379705|TRPC4;nc|ENSG00000133107|Q9UBN4-5|TRPC4;nc|ENSG00000133107|Q9UBN4-7|TRPC4;nc|ENSG00000133107|Q9UBN4-6|TRPC4	nc|ENSG00000133107|Q9UBN4-4|TRPC4	nc|ENSG00000133107|Q9UBN4-4|TRPC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.76641845703125	2	454.247818	906.481082	-1.6783	-0.00076238	-3.8843	-0.0017644	-5.5626	-0.0025268	454.2460454515247	41.619	0.84684	42.253	42.06	42.907	0.6339					24	21	2	0	0	0	0.4196	1	3651	3651		44.117	0	1	275700			6449	3856	4475	4481	7468	7468					0.024100960061218757
EKDLKRRVR	9	Unmodified	_EKDLKRRVR_					0	0	0		ENST00000260746.5_1_10:104445751-104449684:-|nuORF	ENST00000260746.5_1_10:104445751-104449684:-|nuORF	ENST00000260746.5_1_10:104445751-104449684:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.581298828125	3	400.582556	1198.72584	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.1	1	119.18	118.68	119.68	0.087753								0	0	0	0.32547	1	12539	12539		21.686	0.65352	1				6450	9391	4476	4482	7469	7469					0.13442394539788438
EKDLVHTEGQL	11	Unmodified	_EKDLVHTEGQL_					0	0	0		ENST00000489675.1_1_1:54387326-54394129:-|nuORF;ENSG00000081870|ENST00000194214|IFT25	ENST00000489675.1_1_1:54387326-54394129:-|nuORF	ENST00000489675.1_1_1:54387326-54394129:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8233642578125	2	634.827692	1267.64083	-0.84268	-0.00053496	-4.2098	-0.0026725	-5.0525	-0.0032075	634.8250099372073	58.867	0.91354	59.259	58.814	59.728	0.39209					35	21	2	0	0	0	0.55601	1	6212	6212		47.96	1.9873	1	1301400			6451	1473	4477	4483	7470	7470					0.017715594926812628
EKDPKEESSPK	11	Unmodified	_EKDPKEESSPK_					0	0	0			REV__nc|ENSG00000082074|O15117|FYB1	REV__nc|ENSG00000082074|O15117|FYB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	637.3139038085938	2	637.317157	1272.61976	-0.22879	-0.00014581	-3.8701	-0.0024665	-4.0989	-0.0026123	637.3146066499098	64.321	1.8341	64.708	63.919	65.753	0.3868					73	43	3	0	0	0	0.55601	1	6982	6982		47.96	5.0953	1	464870	+		6452	16831	4478	4484	7471	7471					-0.005644506068620103
EKDSGGKTPG	10	Unmodified	_EKDSGGKTPG_					0	0	0		ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	488.23834228515625	2	488.240721	974.466889	-0.68617	-0.00033502	-3.2974	-0.0016099	-3.9835	-0.0019449	488.23901315682974	60.731	0.68857	60.739	60.422	61.11	0.0081215					89	25	5	0	0	0	0.86802	1	5281	5281		27.047	0.98393	1	1290700			6453	3743	4479	4485	7472	7472					-0.021366012127941758
EKDSLGQEVL	10	Unmodified	_EKDSLGQEVL_					0	0	0		nc|ENSG00000067208|O60447|EVI5;nc|ENSG00000067208|O60447-2|EVI5;ENSG00000067208|ENST00000684568|EVI5	nc|ENSG00000067208|O60447|EVI5	nc|ENSG00000067208|O60447|EVI5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.2901000976562	2	559.290411	1116.56627	0.71868	0.00040195	-0.58324	-0.0003262	0.13544	7.5751E-05	559.2899645855562	77.204	0.99672	77.609	77.226	78.222	0.40488					70	25	4	0	0	0	0.16557	1	8781	8781		93.143	2.5424	1	3911800			6454	1179	4480	4486	7473	7473					0.012647966812892264
EKDSLGQEVL	10	Unmodified	_EKDSLGQEVL_					0	0	0		nc|ENSG00000067208|O60447|EVI5;nc|ENSG00000067208|O60447-2|EVI5;ENSG00000067208|ENST00000684568|EVI5	nc|ENSG00000067208|O60447|EVI5	nc|ENSG00000067208|O60447|EVI5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2898559570312	2	559.290411	1116.56627	-0.060928	-3.4076E-05	-0.047323	-2.6468E-05	-0.10825	-6.0544E-05	559.2902950832719	77.079	1.0886	77.647	77.332	78.421	0.56836					71	26	4	0	0	0	0.47091	1	8767	8767		58.23	8.6939	1	4085400			6455	1179	4480	4486	7474	7474					0.012647966812892264
EKEMGVSPCCP	11	Carbamidomethyl (C),Oxidation (M)	_EKEM(Oxidation (M))GVSPC(Carbamidomethyl (C))CP_	EKEMGVSPC(0.762)C(0.238)P	EKEM(1)GVSPCCP	EKEMGVSPC(5.1)C(-5.1)P	EKEM(43)GVSPCCP	0	1	1		nc|ENSG00000186862|Q9H5P4-1|PDZD7	nc|ENSG00000186862|Q9H5P4-1|PDZD7	nc|ENSG00000186862|Q9H5P4-1|PDZD7	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.7542724609375	2	626.753966	1251.49338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.177	1	16.237	15.737	16.737	0.059269								0	0	0	0.56276	1	118	118		42.864	11.334	2				6456	15163	4481	4487	7475	7475	203	219			-0.12230739699612059
EKEQGEKKEAD	11	Unmodified	_EKEQGEKKEAD_					0	0	0			REV__ENSG00000103035|ENST00000219313|PSMD7	REV__ENSG00000103035|ENST00000219313|PSMD7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	645.8117065429688	2	645.812239	1289.60992	-0.43238	-0.00027924	0.3423	0.00022106	-0.090082	-5.8176E-05	645.8124429375736	26.156	0.49569	26.118	25.89	26.386	-0.038523					26	10	3	0	0	0	0.13035	1	1154	1154		85.862	20.396	1	95559	+		6457	17379	4482	4488	7476	7476					-0.02329638612218332
EKEQGEKKEAD	11	Unmodified	_EKEQGEKKEAD_					0	0	0			REV__ENSG00000103035|ENST00000219313|PSMD7	REV__ENSG00000103035|ENST00000219313|PSMD7	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	645.812239	1289.60992	-0.43238	-0.00027924	0.3423	0.00022106	-0.090082	-5.8176E-05	645.8124429375736	26.156	0.49569	26.118	25.89	26.386	-0.038523	-0.01894	0.0012653	NaN	85.862	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95559	+		6458	17379	4482	4488							-0.02329638612218332
EKEQGEKKEAD	11	Unmodified	_EKEQGEKKEAD_					0	0	0			REV__ENSG00000103035|ENST00000219313|PSMD7	REV__ENSG00000103035|ENST00000219313|PSMD7	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	645.812239	1289.60992	-0.16689	-0.00010778	0.40793	0.00026345	0.24104	0.00015567	645.8123319203452	26.591	0.49831	26.415	26.205	26.703	-0.17559	0.27829	0.0013501	NaN	85.862	26	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	228450	+		6459	17379	4482	4488							-0.02329638612218332
EKFINRKQ	8	Unmodified	_EKFINRKQ_					0	0	0			REV__ENSG00000169330|ENST00000305428|MINAR1	REV__ENSG00000169330|ENST00000305428|MINAR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8074340820312	2	531.806365	1061.59818	2.3458	0.0012475	-2.6727	-0.0014214	-0.32698	-0.00017389	531.80487644275	25.24	0.69068	24.809	24.541	25.231	-0.4311					31	15	3	0	0	0	0.88944	1	1282	1282		57.811	1.0902	1	422230	+		6460	21571	4483	4489	7477	7477					0.06984253945756791
EKGADAKGKKG	11	Unmodified	_EKGADAKGKKG_					0	0	0			REV__ENST00000555320.1_1_14:81288942-81289137:+|nuORF;REV__ENST00000529541.1_1_11:13631944-13632271:-|nuORF	REV__ENST00000555320.1_1_14:81288942-81289137:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.8051147460938	2	544.806562	1087.59857	0.41149	0.00022418	-0.3772	-0.0002055	0.034291	1.8682E-05	544.8063017118704	24.787	0.48479	24.838	24.602	25.087	0.050451					23	13	2	0	0	0	0.3308	1	941	941		66.962	1.4965	1	61132	+		6461	28681;28269	4484	4490	7478	7478					0.05827628874953916
EKGDYGRIY	9	Unmodified	_EKGDYGRIY_					0	0	0			REV__ENST00000492977.5_1_1:202119404-202127449:-|nuORF	REV__ENST00000492977.5_1_1:202119404-202127449:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.7698974609375	2	550.772188	1099.52982	0.20093	0.00011067	-0.64019	-0.0003526	-0.43926	-0.00024193	550.7716334502886	66.287	1.0768	66.252	66.005	67.082	-0.035217					118	49	3	0	0	0	0.71772	1	6399	6399		39.253	5.0803	1	1422100	+		6462	19849	4485	4491	7479	7479					-0.015960354247454234
EKGIVCKLT	9	Unmodified	_EKGIVCKLT_					0	0	0			REV__ENST00000482590.1_1_2:201726407-201726548:-|nuORF	REV__ENST00000482590.1_1_2:201726407-201726548:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2381591796875	2	495.786253	989.557952	0.11886	5.893E-05	-1.7041	-0.00084487	-1.5852	-0.00078594	495.7853518034254	31.304	0.59887	31.308	31.015	31.614	0.0037212					20	13	2	0	0	0	0.20789	1	2107	2107		69.628	33.181	1	108610	+		6463	27469	4486	4492	7480	7480					0.0627557123096949
EKGTWVQLK	9	Unmodified	_EKGTWVQLK_					0	0	0		ENST00000483765.5_1_13:27827977-27830662:+|nuORF;ENSG00000122026|ENST00000311549|RPL21	ENST00000483765.5_1_13:27827977-27830662:+|nuORF	ENST00000483765.5_1_13:27827977-27830662:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3067626953125	2	544.808574	1087.60259	0.026613	1.4499E-05	-3.8164	-0.0020792	-3.7898	-0.0020647	544.8064273929182	24.934	1.2168	24.992	24.613	25.83	0.058189					124	57	4	0	0	0	0.71772	1	913	913		39.253	0.44669	1	915340			6464	3207	4487	4493	7481	7481					0.06229718368649628
EKICIKIKHL	10	Unmodified	_EKICIKIKHL_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.87939453125	2	612.878476	1223.7424	1.1743	0.00071971	0.57422	0.00035193	1.7485	0.0010716	612.878611922605	104.31	3.5817	104.48	103.81	107.39	0.17096					311	89	7	0	0	0	0.8608	1	11076	11076		34.173	5.023	1	83708000	+		6465	17426	4488	4494	7482	7482					0.13947759381539981
EKICIKIKHL	10	Unmodified	_EKICIKIKHL_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.87939453125	2	612.878476	1223.7424	0.91302	0.00055957	0.73286	0.00044915	1.6459	0.0010087	612.8787003590065	104.47	3.5452	104.58	103.94	107.49	0.11684					293	87	6	0	0	0	0.4892	1	11092	11092		56.721	15.943	1	81912000	+		6466	17426	4488	4494	7483	7483					0.13947759381539981
EKICIKIKHL	10	Unmodified	_EKICIKIKHL_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.879150390625	2	612.878476	1223.7424	-1.2473	-0.00076447	2.9354	0.001799	1.688	0.0010346	612.8800479877376	104.48	2.784	104.57	103.95	106.73	0.093857					273	68	6	0	0	0	0.4892	2	11013	11013;11049		56.721	20.274	1	81450000	+		6467	17426	4488	4494	7484;7485	7484					0.13947759381539981
EKIICLTRVF	10	Unmodified	_EKIICLTRVF_					0	0	0		ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1;nc|ENSG00000187240|Q8NCM8-3|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3545532226562	2	611.354834	1220.69511	0.21559	0.0001318	1.6628	0.0010166	1.8784	0.0011484	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.77314	1	9870	9870		40.778	6.6056	1	5379900			6468	7849	4489	4495	7486	7486					0.09359480110515506
EKIICLTRVF	10	Unmodified	_EKIICLTRVF_					0	0	0		ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1;nc|ENSG00000187240|Q8NCM8-3|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3541870117188	2	611.354834	1220.69511	1.1383	0.00069592	0.67847	0.00041479	1.8168	0.0011107	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.82886	1	9527	9527		37.812	4.9991	1	7316900			6469	7849	4489	4495	7487	7487					0.09359480110515506
EKIKCEQEGAR	11	Unmodified	_EKIKCEQEGAR_					0	0	0			REV__ENST00000320634.7_1_12:50261247-50261607:-|nuORF	REV__ENST00000320634.7_1_12:50261247-50261607:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	431.3050842285156	3	430.887205	1289.63978	0.20806	8.9649E-05	0.019393	8.3561E-06	0.22745	9.8005E-05	430.88819842747796	78.499	8.7744	78.446	76.872	85.646	-0.053558					346	251	2	0	0	0	0.17289	1	8332	8332		21.78	1.4654	1	189340	+		6470	25002	4490	4496	7488	7488					0.006550218520942508
EKIKEVIGH	9	Unmodified	_EKIKEVIGH_					0	0	0		ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.8084106445312	2	526.808574	1051.60259	0.8285	0.00043646	-1.654	-0.00087134	-0.82549	-0.00043488	526.8075886317766	100.77	1.8367	100.92	100.51	102.34	0.14352					113	44	4	0	0	0	0.51307	1	10574	10574		51.335	3.6781	1	2715400			6471	3129	4491	4497	7489	7489					0.07885718368675043
EKIKIIRGLR	10	Unmodified	_EKIKIIRGLR_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.8793334960938	2	613.408789	1224.80303	-0.38324	-0.00023508	2.2621	0.0013876	1.8789	0.0011525	613.4103781267032	104.8	0.20009	104.78	104.66	104.86	-0.014809					6	4	2	0	0	0	0.37624	1	11301	11301		10.265	0	1	86544			6472	5333;15007	4492	4498	7490	7490					0.19961612756128488
EKIKKIIHG	9	Unmodified	_EKIKKIIHG_					0	0	0		L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|60|2|sense	L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|60|2|sense	L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|60|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.3402099609375	2	533.342584	1064.67061	-1.5064	-0.00080343	-2.9287	-0.001562	-4.4351	-0.0023654	533.3409139496441	99.132	2.1048	99.317	98.763	100.87	0.18582					141	48	4	0	0	0	0.76255	1	10227	10227		35.618	3.6634	1	1837700			6473	14545	4493	4499	7491	7491					0.1408658801931324
EKIKRGLDS	9	Unmodified	_EKIKRGLDS_					0	0	0			REV__ENSG00000104980|ENST00000270538|TIMM44	REV__ENSG00000104980|ENST00000270538|TIMM44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.303466796875	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.76419	1	8965	8965		35.152	0.97948	1	13442000	+		6474	17498	4494	4500	7492	7492					0.07224530363282611
EKILKKYVSVC	11	Unmodified	_EKILKKYVSVC_					0	0	0		ENSG00000205765|ENST00000381647|RIMOC1	ENSG00000205765|ENST00000381647|RIMOC1	ENSG00000205765|ENST00000381647|RIMOC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2566833496094	3	437.256458	1308.74754	2.3979	0.0010485	-0.45603	-0.0001994	1.9418	0.00084908	437.25617297786823	99.22	2.8692	99.166	98.246	101.11	-0.053734					176	66	3	0	0	0	0.73277	1	10758	10758		25.892	0	1	988170			6475	8540	4495	4501	7493	7493					0.10552018453495293
EKINEKKKL	9	Unmodified	_EKINEKKKL_					0	0	0		ENSG00000044459|ENST00000380647|CNTLN	ENSG00000044459|ENST00000380647|CNTLN	ENSG00000044459|ENST00000380647|CNTLN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.3509521484375	2	565.350606	1128.68666	0.56097	0.00031715	-0.8018	-0.0004533	-0.24083	-0.00013615	565.3499776913663	48.469	0.56138	49.373	49.085	49.646	0.90424					31	13	3	0	0	0	0.36616	1	4689	4689		60.118	12.461	1	1046300			6476	948	4496	4502	7494	7494					0.1274624946554468
EKINKIKWLP	10	Unmodified	_EKINKIKWLP_					0	0	0		nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C;ENSG00000074211|ENST00000382599|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8936767578125	2	634.889898	1267.76524	-0.0069402	-4.4063E-06	4.0361	0.0025625	4.0292	0.0025581	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.71042	4	11151	10993;11029;11101;11151		44.117	7.67	1	31286000			6477	1305	4497	4503	7495;7496;7497;7498	7498					0.14207101770648478
EKINKIKWLP	10	Unmodified	_EKINKIKWLP_					0	0	0		nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C;ENSG00000074211|ENST00000382599|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.8934326171875	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.62	1	107.59	107.09	108.09	-0.031487								0	0	0	0.45132	1	11931	11931		25.574	0	1				6478	1305	4497	4503	7499	7499					0.14207101770648478
EKINKIKWLP	10	Unmodified	_EKINKIKWLP_					0	0	0		nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C;ENSG00000074211|ENST00000382599|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.8942260742188	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.81	1	107.78	107.28	108.28	-0.031487								0	0	0	0.45132	1	11957	11957		29.15	3.5755	1				6479	1305	4497	4503	7500	7500					0.14207101770648478
EKINKIKWLP	10	Unmodified	_EKINKIKWLP_					0	0	0		nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C;ENSG00000074211|ENST00000382599|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8927001953125	2	634.889898	1267.76524	1.3476	0.00085558	2.8664	0.0018198	4.214	0.0026754	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.77314	1	11489	11489		40.778	2.9666	1	42647000			6480	1305	4497	4503	7501	7501					0.14207101770648478
EKINKIKWLP	10	Unmodified	_EKINKIKWLP_					0	0	0		nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C;ENSG00000074211|ENST00000382599|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.892822265625	2	634.889898	1267.76524	1.4999	0.00095225	2.3399	0.0014856	3.8398	0.0024378	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.8608	1	11238	11238		34.173	1.3601	1	68597000			6481	1305	4497	4503	7502	7502					0.14207101770648478
EKINKIKWLP	10	Unmodified	_EKINKIKWLP_					0	0	0		nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C;ENSG00000074211|ENST00000382599|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8941040039062	2	634.889898	1267.76524	0.93451	0.00059331	2.8473	0.0018077	3.7818	0.002401	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.46422	2	11359	11179;11359		58.782	5.8453	1	69492000			6482	1305	4497	4503	7503;7504	7504					0.14207101770648478
EKINKKHRK	9	Unmodified	_EKINKKHRK_					0	0	0			REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8666381835938	2	590.867289	1179.72002	-0.23931	-0.0001414	-0.95289	-0.00056303	-1.1922	-0.00070443	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.76764	2	10750	10750;10814		34.173	1.3601	1	39787000	+		6483	16849	4498	4504	7505;7506	7505					0.13735296028107769
EKINKKHRK	9	Unmodified	_EKINKKHRK_					0	0	0			REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8673095703125	2	590.867289	1179.72002	0.84845	0.00050132	-2.4301	-0.0014359	-1.5816	-0.00093454	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.78536	1	10878	10878		29.15	2.4566	1	94771000	+		6484	16849	4498	4504	7507	7507					0.13735296028107769
EKINKKHRK	9	Unmodified	_EKINKKHRK_					0	0	0			REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8666381835938	2	590.867289	1179.72002	0.89156	0.00052679	-2.3999	-0.001418	-1.5084	-0.00089125	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.64922	1	10895	10895		44.117	3.3386	1	84183000	+		6485	16849	4498	4504	7508	7508					0.13735296028107769
EKIPDLLDKLV	11	Unmodified	_EKIPDLLDKLV_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.882568359375	2	641.884478	1281.7544	0.9141	0.00058675	-4.0885	-0.0026243	-3.1744	-0.0020376	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.66009	1	10259	10259		37.508	3.3356	1	4136300	+		6486	16090	4499	4505	7509	7509					0.1247965460568139
EKIQRRGYK	9	Unmodified	_EKIQRRGYK_					0	0	0		chr12:18143293-18198401|18|114.39|0.0|23.45|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|99;chr12:18143293-18198304|14|75.14|0.0|22.84|-|1|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198304,18203231|RERGL,None|99;chr12:18143293-18197336|19|33.89|0.0|21.69|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|99;chr12:18088956-18198401|14|92.57|0.0|23.14|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|99;chr12:18088956-18197336|15|76.93|0.0|22.88|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|99	chr12:18143293-18198401|18|114.39|0.0|23.45|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|99	chr12:18143293-18198401|18|114.39|0.0|23.45|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|99	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3427734375	2	589.343646	1176.67274	-0.6745	-0.00039751	-0.65118	-0.00038377	-1.3257	-0.00078128	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.77244	1	10170	10170		32.812	1.2826	1	16185000			6487	122	4500	4506	7510	7510					0.09147016757128767
EKIQRRGYK	9	Unmodified	_EKIQRRGYK_					0	0	0		chr12:18143293-18198401|18|114.39|0.0|23.45|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|99;chr12:18143293-18198304|14|75.14|0.0|22.84|-|1|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198304,18203231|RERGL,None|99;chr12:18143293-18197336|19|33.89|0.0|21.69|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|99;chr12:18088956-18198401|14|92.57|0.0|23.14|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|99;chr12:18088956-18197336|15|76.93|0.0|22.88|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|99	chr12:18143293-18198401|18|114.39|0.0|23.45|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|99	chr12:18143293-18198401|18|114.39|0.0|23.45|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|99	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3427124023438	2	589.343646	1176.67274	-1.324	-0.00078029	-0.19058	-0.00011232	-1.5146	-0.00089261	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.75725	1	9125	9125		36.447	4.9169	1	5946500			6488	122	4500	4506	7511	7511					0.09147016757128767
EKIRMKVVF	9	Unmodified	_EKIRMKVVF_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.3460083007812	2	575.344269	1148.67399	-0.3799	-0.00021857	2.9725	0.0017102	2.5926	0.0014917	575.3459117588899	98.957	2.3582	98.957	98.457	100.82	0					160	56	5	0	0	0	0.76764	1	10019	10019		34.173	5.0025	1	2637800	+		6489	18396	4501	4507	7512	7512					0.105595148016846
EKIRMKVVF	9	Unmodified	_EKIRMKVVF_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.345458984375	2	575.344269	1148.67399	2.6142	0.0015041	-0.15558	-8.9513E-05	2.4586	0.0014146	575.3441275619858	98.676	2.5508	98.621	98.113	100.66	-0.054825					162	58	5	0	0	0	0.78983	2	10624	10624;10635		27.882	1.1893	1	4409300	+		6490	18396	4501	4507	7513;7514	7513					0.105595148016846
EKIRMKVVF	9	Unmodified	_EKIRMKVVF_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.3452758789062	2	575.344269	1148.67399	0.85707	0.00049311	1.5891	0.00091425	2.4461	0.0014074	575.345131550994	98.458	2.855	98.614	97.622	100.48	0.15659					162	65	5	0	0	0	0.78983	1	10207	10207		27.882	1.8189	1	2526400	+		6491	18396	4501	4507	7515	7515					0.105595148016846
EKIRMKVVF	9	Unmodified	_EKIRMKVVF_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.3455810546875	2	575.344269	1148.67399	-1.3696	-0.00078799	3.6376	0.0020929	2.268	0.0013049	575.3462227460456	98.573	2.415	98.769	98.2	100.61	0.19585					159	55	5	0	0	0	0.7932	1	10220	10220		21.96	0	1	2256700	+		6492	18396	4501	4507	7516	7516					0.105595148016846
EKIRMKVVF	9	Unmodified	_EKIRMKVVF_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.3455810546875	2	575.344269	1148.67399	1.1925	0.00068607	1.4962	0.00086081	2.6886	0.0015469	575.3450411705345	98.393	1.0962	98.77	98.327	99.423	0.37678					95	26	5	0	0	0	0.76764	2	11870	11870;11905		34.173	1.1893	1	3337700	+		6493	18396	4501	4507	7517;7518	7517					0.105595148016846
EKIRTTET	8	Unmodified	_EKIRTTET_					0	0	0		ENST00000509087.1_1_5:140053844-140054778:-|nuORF;nc|ENSG00000170445|P12081-3|HARS1;nc|ENSG00000170445|P12081-2|HARS1;nc|ENSG00000170445|P12081-4|HARS1;ENSG00000170445|ENST00000504156|HARS1	ENST00000509087.1_1_5:140053844-140054778:-|nuORF	ENST00000509087.1_1_5:140053844-140054778:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.26202392578125	2	489.266739	976.518924	0.26522	0.00012977	1.9248	0.00094176	2.1901	0.0010715	489.26753584830016	40.805	0.54317	40.774	40.524	41.067	-0.030987					26	15	2	0	0	0	0.87479	1	2942	2942		30.504	0	1	330550			6494	6590	4502	4508	7519	7519					0.029725622009550534
EKIYSTAF	8	Unmodified	_EKIYSTAF_					0	0	0		ENSG00000241973|ENST00000255882|PI4KA;nc|ENSG00000183506|A4QPH2-4|PI4KAP2;nc|ENSG00000183506|A4QPH2|PI4KAP2;ENST00000360806.9_2_22:21827645-21842641:-|nuORF;nc|ENSG00000241973|P42356-2|PI4KA;ENST00000450651.5_1_22:21841260-21846319:-|nuORF;nc|ENSG00000290425|Q8N8J0|PI4KAP1;nc|ENSG00000183506|A4QPH2-2|PI4KAP2;ENST00000462560.6_1_22:21830876-21842641:-|nuORF;ENST00000467443.5_1_22:21831964-21846319:-|nuORF	ENSG00000241973|ENST00000255882|PI4KA	ENSG00000241973|ENST00000255882|PI4KA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.31298828125	2	479.74765	957.480748	-0.68055	-0.00032649	1.6909	0.00081119	1.0103	0.0004847	479.7481236907538	20.389	0.6332	19.759	19.351	19.984	-0.6296					18	13	2	0	0	0	0.4196	1	659	659		30.504	0	1	45086			6495	8798	4503	4509	7520	7520					0.0003067628628059538
EKKALVKSGG	10	Unmodified	_EKKALVKSGG_					0	0	0			REV__ENSG00000026652|ENST00000320285|AGPAT4	REV__ENSG00000026652|ENST00000320285|AGPAT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.80645751953125	2	508.808574	1015.60259	-1.5863	-0.00080713	-0.23955	-0.00012189	-1.8259	-0.00092901	508.8083574581473	89.656	1.4168	89.832	89.259	90.675	0.1758					59	32	2	0	0	0	0.8651	1	8921	8921		25.574	1.0549	1	1468400	+		6496	16261	4504	4510	7521	7521					0.09541718368666352
EKKELQKW	8	Unmodified	_EKKELQKW_					0	0	0		ENST00000467390.5_1_2:138722061-138759907:+|nuORF;ENSG00000150540|ENST00000280097|HNMT	ENST00000467390.5_1_2:138722061-138759907:+|nuORF	ENST00000467390.5_1_2:138722061-138759907:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.8045654296875	2	544.808574	1087.60259	0.47778	0.0002603	-3.8094	-0.0020754	-3.3316	-0.0018151	544.8063091278402	25.035	0.58678	24.994	24.644	25.231	-0.04117					29	13	3	0	0	0	0.91977	1	1040	1040		45.952	1.8352	1	69297			6497	5070	4505	4511	7522	7522					0.062297183686723656
EKKKKDRFYR	10	Unmodified	_EKKKKDRFYR_					0	0	0		ENSG00000149269|ENST00000356341|PAK1;nc|ENSG00000149269|Q13153-2|PAK1;ENST00000533568.5_1_11:77069900-77103583:-|nuORF	ENSG00000149269|ENST00000356341|PAK1	ENSG00000149269|ENST00000356341|PAK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.6081848144531	3	466.605249	1396.79392	2.578	0.0012029	3.3971	0.0015851	5.9751	0.002788	466.60668985200886	100.48	2.1594	100.43	99.202	101.36	-0.052116					162	50	4	0	0	0	0.86551	1	10884	10884		14.694	0.60766	1	531470			6498	5012	4506	4512	7523	7523					0.11139219399797184
EKKKKVTSSA	10	Unmodified	_EKKKKVTSSA_					0	0	0			REV__nc|ENSG00000129680|Q8IWC1-3|MAP7D3	REV__nc|ENSG00000129680|Q8IWC1-3|MAP7D3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3314819335938	2	553.332413	1104.65027	-0.75754	-0.00041917	0.76066	0.0004209	0.0031222	1.7276E-06	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.86698	1	10357	10357		28.081	3.5623	1	4355400	+		6499	18830	4507	4513	7524	7524					0.10213372568864543
EKKKPFIFVF	10	Unmodified	_EKKKPFIFVF_					0	0	0			REV__ENST00000300952.6_1_19:1258723-1258873:+|nuORF	REV__ENST00000300952.6_1_19:1258723-1258873:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.88232421875	2	641.881542	1281.74853	-0.050098	-3.2157E-05	1.5137	0.00097161	1.4636	0.00093945	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.85694	1	10492	10492		21.96	1.9631	1	3644700	+		6500	24759	4508	4514	7525	7525					0.1189260088467563
EKKKSPKPKKK	11	Unmodified	_EKKKSPKPKKK_					0	0	0		nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617|AP3D1	nc|ENSG00000065000|O14617-3|AP3D1	nc|ENSG00000065000|O14617-3|AP3D1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.62823486328125	3	442.625761	1324.85546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.58	1	115.56	115.06	116.06	-0.016441								0	0	0	0.56276	1	13898	13898		12.957	1.0251	1				6501	14763	4509	4515	7526	7526					0.2060215109904675
EKKLKRYFV	9	Unmodified	_EKKLKRYFV_					0	0	0		ENST00000466099.1_1_20:60768659-60775121:+|nuORF;ENSG00000101181|ENST00000370823|MTG2	ENST00000466099.1_1_20:60768659-60775121:+|nuORF	ENST00000466099.1_1_20:60768659-60775121:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.8721313476562	2	605.868966	1209.72338	2.969	0.0017988	2.3223	0.001407	5.2914	0.0032059	605.8701685265158	100.36	1.5776	100.31	99.825	101.4	-0.052109					123	36	5	0	0	0	0.78058	1	10951	10951		30.504	4.9296	1	1633200			6502	1904	4510	4516	7527	7527					0.12690546082126275
EKKLKRYFV	9	Unmodified	_EKKLKRYFV_					0	0	0		ENST00000466099.1_1_20:60768659-60775121:+|nuORF;ENSG00000101181|ENST00000370823|MTG2	ENST00000466099.1_1_20:60768659-60775121:+|nuORF	ENST00000466099.1_1_20:60768659-60775121:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.8727416992188	2	605.868966	1209.72338	1.0692	0.00064779	4.1265	0.0025001	5.1957	0.0031479	605.8712819289403	100.09	1.5113	100.3	99.817	101.33	0.21512					93	35	4	0	0	0	0.7932	1	10468	10468		23.042	2.0956	1	798340			6503	1904	4510	4516	7528	7528					0.12690546082126275
EKKNAAKK	8	Unmodified	_EKKNAAKK_					0	0	0		nc|ENSG00000125386|P78312-4|FAM193A;nc|ENSG00000125386|P78312-6|FAM193A;nc|ENSG00000125386|P78312-2|FAM193A;nc|ENSG00000125386|P78312-5|FAM193A;nc|ENSG00000125386|P78312|FAM193A;ENSG00000125386|ENST00000637812|FAM193A;nc|ENSG00000125386|P78312-3|FAM193A	nc|ENSG00000125386|P78312-4|FAM193A	nc|ENSG00000125386|P78312-4|FAM193A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.7821960449219	2	458.782359	915.550165	0.6342	0.00029096	-0.9481	-0.00043497	-0.3139	-0.00014401	458.78191502738554	20.969	1.8224	20.953	20.579	22.401	-0.016428					186	90	4	0	0	0	0.3289	2	522	522;540		102.77	3.3984	1	7964600			6504	3385	4511	4517	7529;7530	7529					0.08901180025702615
EKKNEYVY	8	Unmodified	_EKKNEYVY_					0	0	0			REV__nc|ENSG00000176915|Q86XL3-2|ANKLE2	REV__nc|ENSG00000176915|Q86XL3-2|ANKLE2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.2396240234375	2	536.769114	1071.52368	0.25632	0.00013758	4.3661	0.0023436	4.6224	0.0024812	536.7708223803966	53.976	0.50265	54.383	54.07	54.573	0.40663					17	11	2	0	0	0	0.4196	1	5431	5431		31.955	9.3752	1	147180	+		6505	22156	4512	4518	7531	7531					-0.00922553656278069
EKKRIERVLGH	11	Unmodified	_EKKRIERVLGH_					0	0	0			REV__ENSG00000152214|ENST00000326695|RIT2	REV__ENSG00000152214|ENST00000326695|RIT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6083679199219	3	455.608882	1363.80482	-0.22489	-0.00010246	-0.74709	-0.00034038	-0.97198	-0.00044284	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.67762	1	7454	7454		35.178	0	1	1863900	+		6506	20290	4513	4519	7532	7532					0.13746621774066625
EKKRLENRKTK	11	Unmodified	_EKKRLENRKTK_					0	0	0			REV__ENSG00000005187|ENST00000289416|ACSM3	REV__ENSG00000005187|ENST00000289416|ACSM3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6239318847656	3	477.291441	1428.85249	-1.6889	-0.00080608	3.4116	0.0016283	1.7227	0.00082223	477.29309651181865	113.35	1.2333	113.3	113.24	114.47	-0.044777					37	27	2	0	0	0	0.18034	1	12243	12243		11.932	0	1	728010	+		6507	16078	4514	4520	7533	7533					0.15522275974217337
EKKSAIGPVTK	11	Unmodified	_EKKSAIGPVTK_					0	0	0			REV__ENSG00000205496|ENST00000380371|OR51A2	REV__ENSG00000205496|ENST00000380371|OR51A2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	579.34423828125	2	579.348063	1156.68157	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.45	1	65.58	65.08	66.08	0.12908								0	0	0	0.56276	1	5807	5807		23.378	0.79825	1		+		6508	23561	4515	4521	7534	7534					0.10949945602919797
EKKVKHKKKG	10	Unmodified	_EKKVKHKKKG_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9300537109375	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.86444	1	3914	3914		14.694	7.675	1	2636600			6509	2794	4516	4522	7535	7535					0.17569039722025082
EKKVKHKKKG	10	Unmodified	_EKKVKHKKKG_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9302062988281	3	403.931185	1208.77173	0.25098	0.00010138	-4.1453	-0.0016744	-3.8943	-0.001573	403.92942319004646	47.073	4.6899	47.112	45.811	50.501	0.038181					268	130	4	0	0	0	0.8505	1	3592	3592		13.508	5.1007	1	2178500			6510	2794	4516	4522	7536	7536					0.17569039722025082
EKKVKHKKKG	10	Unmodified	_EKKVKHKKKG_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9255065917969	3	403.931185	1208.77173	-1.975	-0.00079776	-4.1289	-0.0016678	-6.1039	-0.0024656	403.9294096595759	43	1.2076	43.71	43.311	44.519	0.71021					95	29	4	0	0	0	0.8651	1	3911	3911		24.232	1.6702	1	4109900			6511	2794	4516	4522	7537	7537					0.17569039722025082
EKKVSTKGKGR	11	Unmodified	_EKKVSTKGKGR_					0	0	0		ENSG00000157259|ENST00000287957|GATAD1	ENSG00000157259|ENST00000287957|GATAD1	ENSG00000157259|ENST00000287957|GATAD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7852783203125	3	406.582333	1216.72517	0.76138	0.00030956	2.0958	0.00085213	2.8572	0.0011617	406.58339312436715	32.073	0.6	32.199	31.903	32.503	0.12642					41	13	4	0	0	0	0.17396	1	2185	2185		38.714	0	1	462940			6512	5420	4517	4523	7538	7538					0.12547555100104546
EKKVTKEKA	9	Unmodified	_EKKVTKEKA_					0	0	0			REV__ENSG00000131711|ENST00000296755|MAP1B	REV__ENSG00000131711|ENST00000296755|MAP1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8206787109375	2	530.821681	1059.62881	-0.85099	-0.00045172	-0.35727	-0.00018965	-1.2083	-0.00064137	530.8213432265311	82.745	2.1308	82.745	82.264	84.395	0					134	52	5	0	0	0	0.78124	1	7788	7788		30.318	4.8675	1	4119600	+		6513	18960	4518	4524	7539	7539					0.10137987540133508
EKLARRPG	8	Unmodified	_EKLARRPG_					0	0	0		ENSG00000172986|ENST00000389617|GXYLT2	ENSG00000172986|ENST00000389617|GXYLT2	ENSG00000172986|ENST00000389617|GXYLT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7790832519531	2	463.780151	925.545748	-0.87225	-0.00040453	-0.71824	-0.00033311	-1.5905	-0.00073764	463.7798455403882	38.467	1.081	38.99	38.633	39.714	0.52235					66	25	3	0	0	0	0.91005	1	3212	3212		42.474	0.078325	1	2514600			6514	6813	4519	4525	7540	7540					0.079997156028071
EKLDQRQCTN	10	Unmodified	_EKLDQRQCTN_					0	0	0		nc|ENSG00000188803|Q6ZSJ9|SHISA6;nc|ENSG00000188803|Q6ZSJ9-2|SHISA6;ENSG00000188803|ENST00000441885|SHISA6	nc|ENSG00000188803|Q6ZSJ9|SHISA6	nc|ENSG00000188803|Q6ZSJ9|SHISA6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7670593261719	3	412.199671	1233.57718	0.011221	4.6254E-06	1.4293	0.00058916	1.4405	0.00059379	412.2001946865939	48.225	0.55434	48.218	48.049	48.604	-0.0070305					25	12	3	0	0	0	0.37624	1	3993	3993		15.921	0	1	125370			6515	7961	4520	4526	7541	7541					-0.03026124216057724
EKLEEDWEIN	10	Unmodified	_EKLEEDWEIN_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64490935-64514966:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7806396484375	3	435.538347	1303.59321	0.3044	0.00013258	-1.4177	-0.00061744	-1.1132	-0.00048486	435.537543375224	37.898	0.41862	38.42	38.174	38.593	0.52235					15	10	3	0	0	0	0.37624	1	3074	3074		9.6461	0.43434	1	97819			6516	14756	4521	4527	7542	7542					-0.046441394981684425
EKLFEKALK	9	Unmodified	_EKLFEKALK_					0	0	0			REV__ENSG00000109436|ENST00000442267|TBC1D9	REV__ENSG00000109436|ENST00000442267|TBC1D9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3323974609375	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.73802	1	9810	9810		37.812	8.662	1	2365500	+		6517	17756	4522	4528	7543	7543					0.10615462062560255
EKLFSNAVIL	10	Unmodified	_EKLFSNAVIL_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3301391601562	2	567.331882	1132.64921	-1.2007	-0.00068122	-1.9524	-0.0011076	-3.1531	-0.0017889	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.8545	1	9172	9172		36.447	3.6962	1	5763000	+		6518	30102	4523	4529	7544	7544					0.0881915819995811
EKLFSNAVIL	10	Unmodified	_EKLFSNAVIL_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3296508789062	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86587	1	9561	9561		29.17	1.0886	1	17338000	+		6519	30102	4523	4529	7545	7545					0.0881915819995811
EKLGLTVTR	9	Unmodified	_EKLGLTVTR_					0	0	0			REV__ENST00000449259.1_1_2:65131502-65132238:-|nuORF	REV__ENST00000449259.1_1_2:65131502-65132238:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.80780029296875	2	508.808574	1015.60259	-0.055595	-2.8287E-05	-1.6183	-0.00082341	-1.6739	-0.0008517	508.8077132921667	83.422	2.5883	83.489	82.396	84.985	0.066719					89	59	2	0	0	0	0.78912	1	8333	8333		28.081	2.5074	1	2642300	+		6520	26852	4524	4530	7546	7546					0.09541718368654983
EKLHKIRTLN	10	Unmodified	_EKLHKIRTLN_					0	0	0		nc|ENSG00000288520|G9CGD6-3|CNK3;nc|ENSG00000288520|G9CGD6|CNK3;nc|ENSG00000288520|G9CGD6-2|CNK3;ENST00000522590.1_1_6:154480965-154534056:-|nuORF;nc|ENSG00000074706|Q8WWN9|IPCEF1;ENSG00000074706|ENST00000367220|IPCEF1	nc|ENSG00000288520|G9CGD6-3|CNK3	nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.92236328125	3	417.922578	1250.7459	-0.96194	-0.00040202	0.30568	0.00012775	-0.65627	-0.00027427	417.922646807868	105.95	2.4445	105.95	105.29	107.73	0					194	56	4	0	0	0	0.85834	2	11012	10940;11012		36.318	12.086	1	9358100			6521	15333	4525	4531	7547;7548	7548					0.13056145479754377
EKLHKIRTLN	10	Unmodified	_EKLHKIRTLN_					0	0	0		nc|ENSG00000288520|G9CGD6-3|CNK3;nc|ENSG00000288520|G9CGD6|CNK3;nc|ENSG00000288520|G9CGD6-2|CNK3;ENST00000522590.1_1_6:154480965-154534056:-|nuORF;nc|ENSG00000074706|Q8WWN9|IPCEF1;ENSG00000074706|ENST00000367220|IPCEF1	nc|ENSG00000288520|G9CGD6-3|CNK3	nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.9223937988281	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.86047	1	11596	11596		28.577	6.0151	1	19495000			6522	15333	4525	4531	7549	7549					0.13056145479754377
EKLHKIRTLN	10	Unmodified	_EKLHKIRTLN_					0	0	0		nc|ENSG00000288520|G9CGD6-3|CNK3;nc|ENSG00000288520|G9CGD6|CNK3;nc|ENSG00000288520|G9CGD6-2|CNK3;ENST00000522590.1_1_6:154480965-154534056:-|nuORF;nc|ENSG00000074706|Q8WWN9|IPCEF1;ENSG00000074706|ENST00000367220|IPCEF1	nc|ENSG00000288520|G9CGD6-3|CNK3	nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.922607421875	3	417.922578	1250.7459	-1.7716	-0.00074038	1.1592	0.00048446	-0.61238	-0.00025593	417.92308931399344	105.49	2.9586	105.65	104.79	107.75	0.15925					261	73	4	0	0	0	0.85834	3	11335	11180;11335;11360		42.338	21.88	1	33626000			6523	15333	4525	4531	7550;7551;7552	7551					0.13056145479754377
EKLHKIRTLN	10	Unmodified	_EKLHKIRTLN_					0	0	0		nc|ENSG00000288520|G9CGD6-3|CNK3;nc|ENSG00000288520|G9CGD6|CNK3;nc|ENSG00000288520|G9CGD6-2|CNK3;ENST00000522590.1_1_6:154480965-154534056:-|nuORF;nc|ENSG00000074706|Q8WWN9|IPCEF1;ENSG00000074706|ENST00000367220|IPCEF1	nc|ENSG00000288520|G9CGD6-3|CNK3	nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.9221496582031	3	417.922578	1250.7459	0.73411	0.0003068	-1.4619	-0.00061096	-0.7278	-0.00030416	417.9219647760214	105.64	2.8346	105.75	104.94	107.78	0.10766					247	69	5	0	0	0	0.8486	4	11195	11195;11218;11290;11366		34.087	8.3812	1	29053000			6524	15333	4525	4531	7553;7554;7555;7556	7553					0.13056145479754377
EKLHKIRTLN	10	Unmodified	_EKLHKIRTLN_					0	0	0		nc|ENSG00000288520|G9CGD6-3|CNK3;nc|ENSG00000288520|G9CGD6|CNK3;nc|ENSG00000288520|G9CGD6-2|CNK3;ENST00000522590.1_1_6:154480965-154534056:-|nuORF;nc|ENSG00000074706|Q8WWN9|IPCEF1;ENSG00000074706|ENST00000367220|IPCEF1	nc|ENSG00000288520|G9CGD6-3|CNK3	nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.9225158691406	3	417.922578	1250.7459	-1.8945	-0.00079175	1.1534	0.00048205	-0.74105	-0.0003097	417.92301973502657	105.61	2.7753	105.68	104.89	107.66	0.073112					226	67	4	0	0	0	0.8486	2	11304	11262;11304		29.551	10.288	1	18308000			6525	15333	4525	4531	7557;7558	7558					0.13056145479754377
EKLIKQRLRE	10	Unmodified	_EKLIKQRLRE_					0	0	0			REV__nc|ENSG00000140553|Q9H3U1-2|UNC45A	REV__nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2726745605469	3	438.273499	1311.79867	-0.96199	-0.00042161	-0.26536	-0.0001163	-1.2273	-0.00053791	438.2732841967114	107.57	0.99143	107.57	106.84	107.83	0					91	23	5	0	0	0	0.86014	1	11116	11116		23.378	0	1	3871200	+		6526	19630	4526	4532	7559	7559					0.15524103542543344
EKLIPGPLSPV	11	Unmodified	_EKLIPGPLSPV_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.3455200195312	2	575.347532	1148.68051	-0.3799	-0.00021857	-2.6981	-0.0015524	-3.078	-0.0017709	575.3459117588899	98.957	2.3582	98.957	98.457	100.82	0					160	56	5	0	0	0	0.732	1	9962	9962		26.063	0	1	2637800			6527	8446	4527	4533	7560	7560					0.1121173123403878
EKLIPGPLSPV	11	Unmodified	_EKLIPGPLSPV_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.3455810546875	2	575.347532	1148.68051	-1.0089	-0.00058045	0.10463	6.0201E-05	-0.90424	-0.00052025	575.3486096870474	98.837	5.2928	98.887	98.351	103.64	0.04982					239	125	5	0	0	0	0.7144	1	10439	10439		29.17	0.020503	1	4222200			6528	8446	4527	4533	7561	7561					0.1121173123403878
EKLIPGPLSPV	11	Unmodified	_EKLIPGPLSPV_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.3456420898438	2	575.347532	1148.68051	0.97571	0.00056137	-4.2468	-0.0024434	-3.2711	-0.001882	575.3449806461122	98.555	2.3295	98.603	98.055	100.38	0.048157					165	53	5	0	0	0	0.7144	1	10510	10510		29.17	1.2878	1	4316200			6529	8446	4527	4533	7562	7562					0.1121173123403878
EKLIPGPLSPV	11	Unmodified	_EKLIPGPLSPV_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.345703125	2	575.347532	1148.68051	0.85707	0.00049311	-4.0816	-0.0023483	-3.2245	-0.0018552	575.345131550994	98.458	2.855	98.614	97.622	100.48	0.15659					162	65	5	0	0	0	0.70737	1	10231	10231		30.318	1.1477	1	2526400			6530	8446	4527	4533	7563	7563					0.1121173123403878
EKLISLFTLN	10	Unmodified	_EKLISLFTLN_					0	0	0			REV__nc|ENSG00000183914|Q9P225-2|DNAH2	REV__nc|ENSG00000183914|Q9P225-2|DNAH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3436279296875	2	589.344989	1176.67542	0.71715	0.00042265	-3.7579	-0.0022147	-3.0408	-0.0017921	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.86802	1	10874	10874		27.047	0.98393	1	2439600	+		6531	22634	4528	4534	7564	7564					0.09415427371459373
EKLKKMKTGR	10	Unmodified	_EKLKKMKTGR_					0	0	0		nc|ENSG00000135945|Q9UBZ9-3|REV1;ENST00000482887.1_1_2:100053173-100055204:-|nuORF;ENST00000486117.1_1_2:100048385-100055261:-|nuORF;ENST00000413697.5_1_2:100019089-100065949:-|nuORF;nc|ENSG00000135945|Q9UBZ9-2|REV1;ENSG00000135945|ENST00000258428|REV1	nc|ENSG00000135945|Q9UBZ9-3|REV1	nc|ENSG00000135945|Q9UBZ9-3|REV1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.91473388671875	3	406.916547	1217.72781	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.07	1	113.01	112.51	113.51	-0.067215								0	0	0	0.45132	1	12274	12274		15.333	0	1				6532	14937	4529	4535	7565	7565					0.12765687233354583
EKLKQSKEAS	10	Unmodified	_EKLKQSKEAS_					0	0	0			REV__nc|ENSG00000197694|Q13813-3|SPTAN1	REV__nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.318603515625	2	574.319502	1146.62445	2.1223	0.0012189	-2.2138	-0.0012714	-0.091457	-5.2525E-05	574.3181422905453	94.479	4.1031	94.419	93.372	97.475	-0.059204					230	96	5	0	0	0	0.86106	1	10097	10097		33.922	2.3918	1	1734300	+		6533	23259	4530	4536	7566	7566					0.05700478326571101
EKLKSELN	8	Unmodified	_EKLKSELN_					0	0	0			REV__ENSG00000205442|ENST00000543880|IZUMO3	REV__ENSG00000205442|ENST00000543880|IZUMO3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.8005065917969	2	480.771657	959.528761	-0.0954	-4.5866E-05	-1.3621	-0.00065488	-1.4575	-0.00070074	480.7705960833114	95.423	0.40585	95.489	95.265	95.671	0.06591					15	9	2	0	0	0	0.4196	1	9988	9988		27.882	0	1	108010	+		6534	23559	4531	4537	7567	7567					0.047377502063341126
EKLLFTLISAS	11	Unmodified	_EKLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3538818359375	2	611.358096	1220.70164	-0.40517	-0.00024771	-3.117	-0.0019056	-3.5221	-0.0021533	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.50531	2	9934	9837;9934		51.528	9.1316	1	5373200	+		6535	28273	4532	4538	7568;7569	7569					0.10011696542937898
EKLLFTLISAS	11	Unmodified	_EKLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3554077148438	2	611.358096	1220.70164	-0.40504	-0.00024762	-2.2662	-0.0013854	-2.6712	-0.0016331	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.6493	2	10017	10017;10077		38.754	4.7516	1	12417000	+		6536	28273	4532	4538	7570;7571	7570					0.10011696542937898
EKLLFTLISAS	11	Unmodified	_EKLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3541870117188	2	611.358096	1220.70164	1.142	0.00069816	-3.7581	-0.0022975	-2.6161	-0.0015994	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.68532	1	9710	9710		33.922	1.1092	1	17478000	+		6537	28273	4532	4538	7572	7572					0.10011696542937898
EKLLFTLISAS	11	Unmodified	_EKLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3543090820312	2	611.358096	1220.70164	0.85002	0.00051967	-4.3059	-0.0026324	-3.4558	-0.0021128	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.638	2	9553	9541;9553		40.058	2.2467	1	6836400	+		6538	28273	4532	4538	7573;7574	7574					0.10011696542937898
EKLLFTLISAS	11	Unmodified	_EKLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.35498046875	2	611.358096	1220.70164	0.8676	0.00053041	-3.483	-0.0021294	-2.6154	-0.001599	611.3560720152175	95.924	5.0581	96.087	95.071	100.13	0.16317					363	118	6	0	0	0	0.68532	3	9764	9764;9775;9847		33.922	2.3918	1	16539000	+		6539	28273	4532	4538	7575;7576;7577	7575					0.10011696542937898
EKLLFTLISAS	11	Unmodified	_EKLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3555908203125	2	611.358096	1220.70164	-1.2523	-0.00076561	-2.209	-0.0013505	-3.4613	-0.0021161	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.62614	1	9521	9521		41.427	3.6151	1	5978100	+		6540	28273	4532	4538	7578	7578					0.10011696542937898
EKLLFTLISAS	11	Unmodified	_EKLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.353759765625	2	611.358096	1220.70164	1.8406	0.0011253	-4.3442	-0.0026559	-2.5036	-0.0015306	611.3554755611618	95.715	4.0888	96.135	95.146	99.235	0.42051					346	99	4	0	0	0	0.72739	2	11351	11351;11398		27.047	2.5281	1	11372000	+		6541	28273	4532	4538	7579;7580	7579					0.10011696542937898
EKLLFTLISAS	11	Unmodified	_EKLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.3544921875	2	611.358096	1220.70164	0.93149	0.00056947	-3.3536	-0.0020503	-2.4222	-0.0014808	611.3560842580883	95.783	3.9941	96.187	95.298	99.293	0.40451					337	97	4	0	0	0	0.72739	1	11538	11538		27.047	0.3544	1	11629000	+		6542	28273	4532	4538	7581	7581					0.10011696542937898
EKLLFTLISAS	11	Unmodified	_EKLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	611.358096	1220.70164	1.7379	0.0010625	-5.2252	-0.0031945	-3.4873	-0.002132	611.3546831040601	93.853	2.7825	94.294	92.428	95.211	0.44099	0.03648	-0.0016692	NaN	51.528	184	69	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2860300	+		6543	28273	4532	4538							0.10011696542937898
EKLLFTLISAS	11	Unmodified	_EKLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	611.358096	1220.70164	0.19981	0.00012215	-3.6255	-0.0022165	-3.4257	-0.0020944	611.355695661193	94.022	2.7837	94.457	92.546	95.329	0.43539	0.19923	0.00028678	NaN	51.528	185	68	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3166900	+		6544	28273	4532	4538							0.10011696542937898
EKLLHKFPYHL	11	Unmodified	_EKLLHKFPYHL_					0	0	0		ENST00000420283.2_1_6:116573500-116573923:-|nuORF	ENST00000420283.2_1_6:116573500-116573923:-|nuORF	ENST00000420283.2_1_6:116573500-116573923:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	475.6084289550781	3	475.606478	1423.79761	-0.0098537	-4.6865E-06	3.9106	0.0018599	3.9008	0.0018552	475.6083074835196	51.584	0.56668	51.582	51.307	51.874	-0.0020447					21	12	2	0	0	0	0.77205	1	4438	4438		17.167	3.0807	1	114630			6545	11448	4533	4539	7582	7582					0.1026588917366098
EKLLIDIIHFL	11	Unmodified	_EKLLIDIIHFL_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;ENST00000583043.5_1_18:67684852-67806940:-|nuORF	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9430847167969	3	451.942868	1352.80677	-1.6861	-0.00076203	2.5014	0.0011305	0.81529	0.00036846	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.74405	1	4403	4403		23.378	5.5448	1	792670			6546	7065	4534	4540	7583	7583					0.14448237739316028
EKLLPVLVHTF	11	Unmodified	_EKLLPVLVHTF_					0	0	0		ENST00000495589.5_1_1:155181271-155183486:+|nuORF;nc|ENSG00000173171|Q13505-3|MTX1;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;ENSG00000173171|ENST00000368376|MTX1	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3922119140625	2	648.389731	1294.76491	1.6039	0.00104	3.3244	0.0021555	4.9283	0.0031955	648.3917676742469	106.97	1.0935	107.11	106.64	107.73	0.13866					101	26	4	0	0	0	0.72106	1	11448	11448		28.081	0	1	58516000			6547	6836	4535	4541	7584	7584					0.12931682050793825
EKLMLHLLH	9	Unmodified	_EKLMLHLLH_					0	0	0			REV__nc|ENSG00000119121|Q9BX84-4|TRPM6	REV__nc|ENSG00000119121|Q9BX84-4|TRPM6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3282470703125	2	567.328619	1132.64269	0.27026	0.00015333	2.1429	0.0012157	2.4131	0.001369	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.67235	1	11349	11349		42.474	4.6629	1	6007000	+		6548	18339	4536	4542	7585	7585					0.08166941767581193
EKLPVLTAM	9	Unmodified	_EKLPVLTAM_					0	0	0		ENST00000394609.6_1_2:55200100-55200154:-|nuORF	ENST00000394609.6_1_2:55200100-55200154:-|nuORF	ENST00000394609.6_1_2:55200100-55200154:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2901306152344	2	501.288628	1000.5627	-0.064942	-3.2555E-05	3.6163	0.0018128	3.5513	0.0017802	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.71772	1	8363	8363		39.253	7.298	1	2854100			6549	11070	4537	4543	7586	7586					0.06244455373712299
EKLPVRPHPPL	11	Unmodified	_EKLPVRPHPPL_					0	0	0			REV__nc|ENSG00000278318|Q9UJW7-2|ZNF229	REV__nc|ENSG00000278318|Q9UJW7-2|ZNF229	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8823852539062	2	641.885147	1281.75574	-0.046992	-3.0164E-05	-4.0766	-0.0026167	-4.1236	-0.0026469	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.53361	1	9815	9815		49.536	7.1399	1	2217900	+		6550	24035	4538	4544	7587	7587					0.12613333485114708
EKLPVRPHPPL	11	Unmodified	_EKLPVRPHPPL_					0	0	0			REV__nc|ENSG00000278318|Q9UJW7-2|ZNF229	REV__nc|ENSG00000278318|Q9UJW7-2|ZNF229	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8820190429688	2	641.885147	1281.75574	-1.1529	-0.00074004	-3.1	-0.0019899	-4.2529	-0.0027299	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.70737	1	10143	10143		30.318	1.1477	1	3521600	+		6551	24035	4538	4544	7588	7588					0.12613333485114708
EKLQKRWDWRW	11	Unmodified	_EKLQKRWDWRW_					0	0	0		nc|ENSG00000166321|Q86X67-4|NUDT13	nc|ENSG00000166321|Q86X67-4|NUDT13	nc|ENSG00000166321|Q86X67-4|NUDT13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.9259643554688	3	544.291553	1629.85283	0.086074	4.685E-05	-0.85851	-0.00046728	-0.77244	-0.00042043	544.2910884367893	19.46	1.0681	18.99	18.79	19.859	-0.46967					55	22	4	0	0	0	0.17955	1	513	513		12.957	9.7462	1	140260			6552	15070	4539	4545	7589	7589					0.06309695694108086
EKLQLRGN	8	Unmodified	_EKLQLRGN_					0	0	0		ENST00000475897.1_1_3:63953587-63965844:+|nuORF;nc|ENSG00000163635|O15265-3|ATXN7;ENST00000474112.5_1_3:63898274-63982174:+|nuORF;ENSG00000163635|ENST00000674280|ATXN7;nc|ENSG00000163635|O15265-2|ATXN7	ENST00000475897.1_1_3:63953587-63965844:+|nuORF	ENST00000475897.1_1_3:63953587-63965844:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2775573730469	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.90983	1	10005	10005		42.396	0.96952	1	5642300			6553	5844	4540	4546	7590	7590					0.060319920203255606
EKLRVGAAGT	10	Unmodified	_EKLRVGAAGT_					0	0	0			REV__nc|ENSG00000138778|Q02224-3|CENPE	REV__nc|ENSG00000138778|Q02224-3|CENPE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2906188964844	2	501.290548	1000.56654	-0.36653	-0.00018374	0.15869	7.9552E-05	-0.20784	-0.00010419	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.85981	1	9188	9188		35.152	4.8343	1	9903700	+		6554	15815	4541	4547	7591	7591					0.06628261191792717
EKLSDKVVAS	10	Unmodified	_EKLSDKVVAS_					0	0	0		ENSG00000047410|ENST00000367478|TPR;ENST00000481347.1_1_1:186312376-186313186:-|nuORF	ENSG00000047410|ENST00000367478|TPR	ENSG00000047410|ENST00000367478|TPR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3268432617188	2	538.303321	1074.59209	-1.4903	-0.00080223	0.18721	0.00010078	-1.3031	-0.00070145	538.3035496557804	101.01	0.27833	101.17	101.04	101.32	0.15505					10	6	2	0	0	0	0.37624	1	10524	10524		41.427	14.734	1	349150			6555	960	4542	4548	7592	7592					0.057776909235599305
EKLTSRIKS	9	Unmodified	_EKLTSRIKS_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.318603515625	2	531.319306	1060.62406	-0.04293	-2.281E-05	0.15124	8.0359E-05	0.10831	5.7549E-05	531.3190516758626	94.867	1.8687	95.098	94.611	96.479	0.23103					163	44	5	0	0	0	0.75907	1	9725	9725		36.318	7.1476	1	2940800			6556	5146	4543	4549	7593	7593					0.0961710339736328
EKLVNKRKYIH	11	Unmodified	_EKLVNKRKYIH_					0	0	0			REV__nc|ENSG00000167904|Q96MH6-3|TMEM68	REV__nc|ENSG00000167904|Q96MH6-3|TMEM68	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6235656738281	3	476.620899	1426.84087	2.8112	0.0013399	3.054	0.0014556	5.8652	0.0027955	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.79224	1	13009	13009		12.957	2.8536	1	2689700	+		6557	21437	4544	4550	7594	7594					0.1445207895094427
EKMDKNRLTY	10	Unmodified	_EKMDKNRLTY_					0	0	0			REV__ENSG00000177476|ENST00000320002|OR2G3	REV__ENSG00000177476|ENST00000320002|OR2G3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	649.3379516601562	2	649.332087	1296.64962	-0.11439	-7.4278E-05	-3.1032	-0.002015	-3.2176	-0.0020893	649.3298654527586	61.897	0.32841	61.863	61.746	62.075	-0.033173					18	9	2	0	0	0	0.83456	1	5853	5853		13.454	0	1	237700	+		6558	22207	4545	4551	7595	7595					0.013162098574866832
EKMLKLFIK	9	Unmodified	_EKMLKLFIK_					0	0	0			REV__nc|ENSG00000198718|Q9Y4F4|TOGARAM1	REV__nc|ENSG00000198718|Q9Y4F4|TOGARAM1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.3538818359375	2	575.356845	1148.69914	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.25	1	104.25	103.75	104.75	-0.0035706								0	0	0	0.32159	1	11237	11237		23.042	2.0956	1		+		6559	23361	4546	4552	7596	7596					0.1307356960423931
EKMSSAAGVY	10	Unmodified	_EKMSSAAGVY_					0	0	0		ENSG00000108932|ENST00000580666|SLC16A6	ENSG00000108932|ENST00000580666|SLC16A6	ENSG00000108932|ENST00000580666|SLC16A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	521.7468872070312	2	521.747324	1041.4801	-0.027158	-1.417E-05	-3.2938	-0.0017185	-3.321	-0.0017327	521.7454550117258	57.581	0.4487	57.567	57.338	57.786	-0.013641					31	17	2	0	0	0	0.8608	1	5204	5204		34.173	1.3601	1	180880			6560	2440	4547	4553	7597	7597					-0.038984864250551254
EKMWTYMKS	9	Unmodified	_EKMWTYMKS_					0	0	0		nc|ENSG00000155511|P42261-4|GRIA1;nc|ENSG00000155511|P42261-2|GRIA1;ENSG00000155511|ENST00000285900|GRIA1;nc|ENSG00000155511|P42261-6|GRIA1;nc|ENSG00000155511|P42261-5|GRIA1;nc|ENSG00000155511|P42261-3|GRIA1	nc|ENSG00000155511|P42261-4|GRIA1	nc|ENSG00000155511|P42261-4|GRIA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.2781372070312	2	602.280477	1202.5464	-0.83376	-0.00050216	-2.0803	-0.0012529	-2.9141	-0.0017551	602.2791335320527	40.386	0.68192	40.343	40.008	40.69	-0.043694					43	16	4	0	0	0	0.35373	1	2974	2974		60.972	2.19	1	723560			6561	5326	4548	4554	7598	7598					-0.046769938546958656
EKNRGKRRR	9	Unmodified	_EKNRGKRRR_					0	0	0			REV__ENSG00000182768|ENST00000379095|NGRN	REV__ENSG00000182768|ENST00000379095|NGRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5809631347656	3	400.577916	1198.71192	3.1807	0.0012741	3.3561	0.0013444	6.5368	0.0026185	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.7932	1	12618	12618		16.717	0.71061	1	88404	+		6562	22547	4549	4555	7599	7599					0.1205116183134578
EKNRSHVLQ	9	Unmodified	_EKNRSHVLQ_					0	0	0		nc|ENSG00000165699|Q92574-2|TSC1;ENSG00000165699|ENST00000298552|TSC1	nc|ENSG00000165699|Q92574-2|TSC1	nc|ENSG00000165699|Q92574-2|TSC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.8073120117188	2	555.804354	1109.59415	-0.89307	-0.00049637	4.2269	0.0023493	3.3339	0.001853	555.806604901083	59.553	0.91605	59.54	59.196	60.112	-0.013729					63	24	4	0	0	0	0.48102	1	5491	5491		52.937	2.9122	1	365910			6563	6116	4550	4556	7600	7600					0.043741644520423506
EKNRSHVLQ	9	Unmodified	_EKNRSHVLQ_					0	0	0		nc|ENSG00000165699|Q92574-2|TSC1;ENSG00000165699|ENST00000298552|TSC1	nc|ENSG00000165699|Q92574-2|TSC1	nc|ENSG00000165699|Q92574-2|TSC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.8063354492188	2	555.804354	1109.59415	0.60306	0.00033519	2.703	0.0015024	3.3061	0.0018376	555.8058596717976	59.48	0.90499	59.448	59.077	59.982	-0.031731					51	22	3	0	0	0	0.12652	2	5579	5579;5590		87.754	10.98	1	344520			6564	6116	4550	4556	7601;7602	7601					0.043741644520423506
EKNRSHVLQ	9	Unmodified	_EKNRSHVLQ_					0	0	0		nc|ENSG00000165699|Q92574-2|TSC1;ENSG00000165699|ENST00000298552|TSC1	nc|ENSG00000165699|Q92574-2|TSC1	nc|ENSG00000165699|Q92574-2|TSC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.8057250976562	2	555.804354	1109.59415	-0.44432	-0.00024695	3.6194	0.0020117	3.175	0.0017647	555.8063523892554	59.451	1.0465	59.483	59.019	60.065	0.032825					57	25	3	0	0	0	0.33718	1	5496	5496		62.107	3.3255	1	387260			6565	6116	4550	4556	7603	7603					0.043741644520423506
EKNRSHVLQ	9	Unmodified	_EKNRSHVLQ_					0	0	0		nc|ENSG00000165699|Q92574-2|TSC1;ENSG00000165699|ENST00000298552|TSC1	nc|ENSG00000165699|Q92574-2|TSC1	nc|ENSG00000165699|Q92574-2|TSC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.8056640625	2	555.804354	1109.59415	0.48387	0.00026894	3.2488	0.0018057	3.7326	0.0020746	555.8060936084939	59.421	0.71672	59.535	59.153	59.87	0.11396					34	20	2	0	0	0	0.64555	1	5112	5112		44.377	5.1244	1	296800			6566	6116	4550	4556	7604	7604					0.043741644520423506
EKNSVIRSL	9	Unmodified	_EKNSVIRSL_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3033447265625	2	523.303655	1044.59276	1.1688	0.00061163	-1.3622	-0.00071286	-0.19344	-0.00010123	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.78912	1	8963	8963		28.081	5.039	1	12580000			6567	7421	4551	4557	7605	7605					0.07224530363282611
EKPFIKTGF	9	Unmodified	_EKPFIKTGF_					0	0	0		nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-5|PCM1;ENSG00000078674|ENST00000325083|PCM1	nc|ENSG00000078674|Q15154-4|PCM1	nc|ENSG00000078674|Q15154-4|PCM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.787841796875	2	533.800217	1065.58588	-0.65486	-0.00034957	3.6404	0.0019432	2.9855	0.0015937	533.8020239593342	29.153	1.172	29.124	28.822	29.994	-0.029207					56	26	3	0	0	0	0.20789	1	1773	1773		35.618	0	1	617740			6568	1404	4552	4558	7606	7606					0.05571217482724933
EKPGQQVVELR	11	Unmodified	_EKPGQQVVELR_					0	0	0			REV__ENST00000572681.6_2_19:42791821-42793046:+|nuORF	REV__ENST00000572681.6_2_19:42791821-42793046:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8591918945312	2	641.859326	1281.7041	-0.048782	-3.1311E-05	-0.26468	-0.00016989	-0.31346	-0.0002012	642.3608077145252	117.28	0.25537	117.21	117	117.26	-0.07531					22	8	4	0	0	0	0.66929	2	12566	12566;12579		36.447	4.9169	1	1765100	+		6569	28950	4553	4559	7607;7608	7607					0.07451545000549231
EKPGQQVVELR	11	Unmodified	_EKPGQQVVELR_					0	0	0			REV__ENST00000572681.6_2_19:42791821-42793046:+|nuORF	REV__ENST00000572681.6_2_19:42791821-42793046:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3611450195312	2	641.859326	1281.7041	-0.047501	-3.0489E-05	-0.23308	-0.00014961	-0.28058	-0.0001801	642.3607489097492	117.62	0.31653	117.55	117.34	117.65	-0.07531					33	10	4	0	0	0	0.62614	1	12619	12619		41.427	2.1738	1	442700	+		6570	28950	4553	4559	7609	7609					0.07451545000549231
EKPGQQVVELR	11	Unmodified	_EKPGQQVVELR_					0	0	0			REV__ENST00000572681.6_2_19:42791821-42793046:+|nuORF	REV__ENST00000572681.6_2_19:42791821-42793046:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3582763671875	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.60058	8	12304	12304;12349;12401;12486;12667;12691;12736;13009		44.377	5.1244	1	27133000	+		6571	28950	4553	4559	7610;7611;7612;7613;7614;7615;7616;7617	7610					0.07451545000549231
EKPGQQVVELR	11	Unmodified	_EKPGQQVVELR_					0	0	0			REV__ENST00000572681.6_2_19:42791821-42793046:+|nuORF	REV__ENST00000572681.6_2_19:42791821-42793046:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.363037109375	2	641.859326	1281.7041	-1.1529	-0.00074	2.7375	0.0017571	1.5846	0.0010171	642.363236479055	112.35	1.0246	112.31	111.89	112.91	-0.032333					49	30	2	0	0	0	0.62614	1	12021	12021		41.427	3.6151	1	21219000	+		6572	28950	4553	4559	7618	7618					0.07451545000549231
EKPKNAIHTFV	11	Unmodified	_EKPKNAIHTFV_					0	0	0		ENSG00000121691|ENST00000241052|CAT	ENSG00000121691|ENST00000241052|CAT	ENSG00000121691|ENST00000241052|CAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3609619140625	2	642.358962	1282.70337	2.6975	0.0017327	2.3103	0.0014841	5.0078	0.0032168	642.3601603180224	112.87	0.9769	112.84	112.65	113.62	-0.024811					46	24	2	0	0	0	0.62614	1	12552	12552		41.427	3.6151	1	12229000			6573	3194	4554	4560	7619	7619					0.07332750351497452
EKPMSLSSPLV	11	Unmodified	_EKPMSLSSPLV_					0	0	0		ENST00000521792.2_1_8:43125532-43126024:-|nuORF	ENST00000521792.2_1_8:43125532-43126024:-|nuORF	ENST00000521792.2_1_8:43125532-43126024:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.322021484375	2	594.320657	1186.62676	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.204	1	61.758	61.258	62.258	0.55386								0	0	0	0.56276	1	6537	6537		33.922	1.1092	1				6574	13177	4555	4561	7620	7620					0.040911907400186465
EKPVVDGRY	9	Unmodified	_EKPVVDGRY_					0	0	0			REV__nc|ENSG00000178462|A6NHL2-2|TUBAL3	REV__nc|ENSG00000178462|A6NHL2-2|TUBAL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.7823486328125	2	531.782556	1061.55056	-0.45981	-0.00024452	0.04954	2.6344E-05	-0.41027	-0.00021817	531.7825831037422	29.277	2.7619	29.248	28.206	30.968	-0.029207					186	63	5	0	0	0	0.28163	1	1778	1778		66.429	3.123	1	10622000	+		6575	22281	4556	4562	7621	7621					0.022245549549097632
EKQARPERTA	10	Unmodified	_EKQARPERTA_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.3212890625	2	593.320368	1184.62618	0.77272	0.00045847	1.6473	0.00097739	2.42	0.0014359	593.321294730997	41.341	1.0593	41.346	41.006	42.066	0.0043983					55	29	2	0	0	0	0.42897	5	2723	2681;2690;2700;2710;2723		61.691	3.5823	1	2399500	+		6576	29671	4557	4563	7622;7623;7624;7625;7626	7626					0.041255321351854946
EKQARPERTA	10	Unmodified	_EKQARPERTA_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.3218994140625	2	593.320368	1184.62618	0.35769	0.00021223	1.712	0.0010157	2.0697	0.001228	593.3215156818131	41.162	4.4397	41.235	40.577	45.017	0.073414					182	121	3	0	0	0	0.26675	5	2692	2642;2650;2659;2682;2692		76.17	21.633	1	2593200	+		6577	29671	4557	4563	7627;7628;7629;7630;7631	7631					0.041255321351854946
EKQARPERTA	10	Unmodified	_EKQARPERTA_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3206176757812	2	593.320368	1184.62618	0.35222	0.00020898	1.7699	0.0010501	2.1221	0.0012591	593.3214955496583	41.16	1.5019	41.115	40.771	42.273	-0.045467					105	44	3	0	0	0	0.51401	3	2664	2655;2664;2683		54.722	9.4609	1	2608700	+		6578	29671	4557	4563	7632;7633;7634	7633					0.041255321351854946
EKQARPERTA	10	Unmodified	_EKQARPERTA_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	593.320368	1184.62618	-1.1311	-0.00067108	2.9999	0.0017799	1.8688	0.0011088	593.3220294875355	41.137	0.35622	41.137	40.944	41.3	0	-0.10767	0.0014875	NaN	76.17	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116190	+		6579	29671	4557	4563							0.041255321351854946
EKQARPERTA	10	Unmodified	_EKQARPERTA_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	593.320368	1184.62618	-0.23207	-0.00013769	2.3642	0.0014027	2.1322	0.0012651	593.3214911868928	41.432	0.44231	41.401	41.141	41.583	-0.030991	0.15646	0.00073321	NaN	76.17	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	131760	+		6580	29671	4557	4563							0.041255321351854946
EKQARPERTA	10	Unmodified	_EKQARPERTA_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	593.320368	1184.62618	-0.644	-0.0003821	2.92	0.0017325	2.276	0.0013504	593.3218665201159	41.274	0.51768	41.233	41.054	41.571	-0.04081	-0.011498	0.0013928	NaN	76.17	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127680	+		6581	29671	4557	4563							0.041255321351854946
EKQARPERTA	10	Unmodified	_EKQARPERTA_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	593.320368	1184.62618	0.77272	0.00045847	1.6473	0.00097739	2.42	0.0014359	593.321294730997	41.341	1.0593	41.346	41.006	42.066	0.0043983	0.10134	-0.00011748	NaN	76.17	55	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2399500	+		6582	29671	4557	4563							0.041255321351854946
EKQHLLSIDE	10	Unmodified	_EKQHLLSIDE_					0	0	0		ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8-5|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.3184204101562	2	606.31696	1210.61937	-0.21552	-0.00013067	3.5269	0.0021384	3.3114	0.0020077	606.3190221674857	63	0.86604	63.388	62.925	63.791	0.38779					43	19	3	0	0	0	0.85297	1	6761	6761		38.754	2.3069	1	492440			6583	6887	4558	4564	7635	7635					0.02248174463943542
EKRALATK	8	Unmodified	_EKRALATK_					0	0	0			REV__nc|ENSG00000141577|Q9UPN4-3|CEP131	REV__nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.781982421875	2	458.782359	915.550165	0.6342	0.00029096	-0.9481	-0.00043497	-0.3139	-0.00014401	458.78191502738554	20.969	1.8224	20.953	20.579	22.401	-0.016428					186	90	4	0	0	0	0.36305	2	567	554;567		84.916	8.1414	1	7964600	+		6584	19701	4559	4565	7636;7637	7637					0.08901180025702615
EKRAPKKKGR	10	Unmodified	_EKRAPKKKGR_					0	0	0		ENSG00000006432|ENST00000554752|MAP3K9;nc|ENSG00000006432|P80192-4|MAP3K9	ENSG00000006432|ENST00000554752|MAP3K9	ENSG00000006432|ENST00000554752|MAP3K9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3816528320312	2	599.380563	1196.74657	-1.2913	-0.00077396	0.50428	0.00030226	-0.78699	-0.0004717	599.3806932084216	103.36	2.8938	103.47	103.07	105.96	0.11494					245	72	6	0	0	0	0.86718	1	10821	10821		27.882	2.3082	1	20299000			6585	698	4560	4566	7638	7638					0.15606984919440947
EKRERLRTCV	10	Unmodified	_EKRERLRTCV_					0	0	0			REV__nc|ENSG00000120907|P35348-7|ADRA1A	REV__nc|ENSG00000120907|P35348-7|ADRA1A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.8844604492188	2	645.35897	1288.70339	-1.1412	-0.00073646	-2.2509	-0.0014526	-3.3921	-0.0021891	645.3573280767117	105.66	1.6202	105.73	105.14	106.76	0.073112					62	39	2	0	0	0	0.37624	1	11302	11302		36.447	8.3653	1	300130	+		6586	29812	4561	4567	7639	7639					0.07058427079869034
EKRIPQLLL	9	Unmodified	_EKRIPQLLL_					0	0	0			REV__ENST00000531716.1_1_11:73996688-73997284:-|nuORF	REV__ENST00000531716.1_1_11:73996688-73997284:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.3533935546875	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.7932	1	10455	10455		18.324	2.6826	1	5963400	+		6587	20164	4562	4568	7640	7640					0.14682857190814502
EKRKHKEKK	9	Unmodified	_EKRKHKEKK_					0	0	0			REV__nc|ENSG00000141867|O60885-2|BRD4	REV__nc|ENSG00000141867|O60885-2|BRD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.8729858398438	2	605.872571	1209.73059	2.1215	0.0012854	-2.3851	-0.001445	-0.26355	-0.00015968	605.870912508801	99.925	1.6378	100.29	99.878	101.52	0.36292					110	40	4	0	0	0	0.7932	1	12147	12147		15.642	0.77694	1	1159400	+		6588	19712	4563	4569	7641	7641					0.13411278682542616
EKRKLSVL	8	Unmodified	_EKRKLSVL_					0	0	0		ENSG00000197798|ENST00000533050|FAM118B	ENSG00000197798|ENST00000533050|FAM118B	ENSG00000197798|ENST00000533050|FAM118B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.29302978515625	2	486.813659	971.612765	0.071576	3.4844E-05	-0.69374	-0.00033772	-0.62216	-0.00030288	486.81360529810433	21.094	0.20715	21.17	21.075	21.282	0.075848					10	8	2	0	0	0	0.4196	1	570	570		26.796	4.8362	1	46134			6589	8199	4564	4570	7642	7642					0.12582326093888696
EKRKMENQCS	10	Unmodified	_EKRKMENQCS_					0	0	0		ENST00000274712.7_1_5:140080440-140083534:+|nuORF	ENST00000274712.7_1_5:140080440-140083534:+|nuORF	ENST00000274712.7_1_5:140080440-140083534:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.4179077148438	2	626.792272	1251.56999	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.03	1	15.079	14.579	15.579	0.04908								0	0	0	0.45132	1	4	4		36.447	2.2742	1				6590	9590	4565	4571	7643	7643					-0.04573180088141271
EKRKRLKQLS	10	Unmodified	_EKRKRLKQLS_					0	0	0			REV__ENST00000357668.2_1_8:131193076-131199494:-|nuORF	REV__ENST00000357668.2_1_8:131193076-131199494:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.405029296875	2	643.406778	1284.799	2.6785	0.0017233	-4.0081	-0.0025788	-1.3296	-0.00085549	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.86471	1	11738	11738		30.318	1.1477	1	14704000	+		6591	25420	4566	4572	7644	7644					0.16799523262420735
EKRKVVIPP	9	Unmodified	_EKRKVVIPP_					0	0	0		nc|ENSG00000079150|Q9Y680-1|FKBP7;ENST00000464248.1_1_2:179330632-179343265:-|nuORF;nc|ENSG00000079150|Q9Y680-3|FKBP7;ENSG00000079150|ENST00000424785|FKBP7	nc|ENSG00000079150|Q9Y680-1|FKBP7	nc|ENSG00000079150|Q9Y680-1|FKBP7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.3402099609375	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.7932	1	10060	10060		25.45	1.2474	1	1199500			6592	1411	4567	4573	7645	7645					0.1408658801931324
EKRKVVIPP	9	Unmodified	_EKRKVVIPP_					0	0	0		nc|ENSG00000079150|Q9Y680-1|FKBP7;ENST00000464248.1_1_2:179330632-179343265:-|nuORF;nc|ENSG00000079150|Q9Y680-3|FKBP7;ENSG00000079150|ENST00000424785|FKBP7	nc|ENSG00000079150|Q9Y680-1|FKBP7	nc|ENSG00000079150|Q9Y680-1|FKBP7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.3399047851562	2	533.342584	1064.67061	-1.5064	-0.00080343	-2.9287	-0.001562	-4.4351	-0.0023654	533.3409139496441	99.132	2.1048	99.317	98.763	100.87	0.18582					141	48	4	0	0	0	0.7932	1	10215	10215		18.324	0.95945	1	1837700			6593	1411	4567	4573	7646	7646					0.1408658801931324
EKRLARRPRGG	11	Unmodified	_EKRLARRPRGG_					0	0	0		ENST00000416282.2_1_3:38180152-38182096:+|nuORF;nc|ENSG00000172936|Q99836-6|MYD88;ENST00000484513.1_1_3:38181817-38182096:+|nuORF	ENST00000416282.2_1_3:38180152-38182096:+|nuORF	ENST00000416282.2_1_3:38180152-38182096:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.59747314453125	3	432.597088	1294.76943	-0.96173	-0.00041604	3.3987	0.0014703	2.4369	0.0010542	432.5984432488919	107.49	0.99143	107.49	106.84	107.83	0					54	23	3	0	0	0	0.7342	1	11210	11210		17.167	1.8293	1	9853300			6594	11392	4568	4574	7647	7647					0.13384004036902297
EKRLWPAKVLA	11	Unmodified	_EKRLWPAKVLA_					0	0	0		ENSG00000160953|ENST00000591337|PWWP3A;nc|ENSG00000160953|Q2TAK8-3|PWWP3A	ENSG00000160953|ENST00000591337|PWWP3A	ENSG00000160953|ENST00000591337|PWWP3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.5993347167969	3	437.602957	1309.78704	0.016913	7.4012E-06	3.4093	0.0014919	3.4262	0.0014993	437.6044125439364	15.967	0.2175	16.026	15.931	16.148	0.059269					18	8	4	0	0	0	0.74405	1	96	96		23.378	0.81632	1	82584			6595	5618	4569	4575	7648	7648					0.14453906519224802
EKRNLKYVQQ	10	Unmodified	_EKRNLKYVQQ_					0	0	0			REV__nc|ENSG00000150967|Q9NP78-3|ABCB9;REV__ENST00000537276.5_1_12:123416657-123444319:-|nuORF	REV__ENST00000537276.5_1_12:123416657-123444319:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.9140319824219	3	435.913971	1304.72008	1.026	0.00044724	-0.84708	-0.00036925	0.17891	7.7987E-05	435.9135040455985	33.079	0.87504	33.078	32.826	33.701	-0.0016365					45	20	3	0	0	0	0.86225	1	1929	1929		32.751	5.7032	1	121590	+		6596	20226;28419	4570	4576	7649	7649					0.07991251237444885
EKRRKEREKAR	11	Unmodified	_EKRRKEREKAR_					0	0	0			REV__ENSG00000100813|ENST00000605057|ACIN1	REV__ENSG00000100813|ENST00000605057|ACIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	495.9593200683594	3	495.962207	1484.86479	-1.6281	-0.00080749	-4.4573	-0.0022107	-6.0855	-0.0030182	495.95953197702175	103.56	1.6204	103.67	103.15	104.77	0.11495					123	40	4	0	0	0	0.75457	1	10904	10904		21.032	4.5024	1	573460	+		6597	17222	4571	4577	7650	7650					0.14175312437305365
EKRRPRRRG	9	Unmodified	_EKRRPRRRG_					0	0	0		ENST00000376772.7_1_6:30035001-30035094:+|nuORF	ENST00000376772.7_1_6:30035001-30035094:+|nuORF	ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.8720703125	2	605.871228	1209.7279	2.969	0.0017988	-1.4122	-0.00085562	1.5568	0.00094322	605.8701685265158	100.36	1.5776	100.31	99.825	101.4	-0.052109					123	36	5	0	0	0	0.76255	1	10913	10913		35.618	4.0885	1	1633200			6598	10823	4572	4578	7651	7651					0.13142868068257485
EKRSFTILL	9	Unmodified	_EKRSFTILL_					0	0	0		nc|ENSG00000134755|Q02487-2|DSC2;ENSG00000134755|ENST00000280904|DSC2	nc|ENSG00000134755|Q02487-2|DSC2	nc|ENSG00000134755|Q02487-2|DSC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8297729492188	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.58668	1	9097	9097		47.657	6.8792	1	1489800			6599	14934	4573	4579	7652	7652					0.10094577919835501
EKRSFTILL	9	Unmodified	_EKRSFTILL_					0	0	0		nc|ENSG00000134755|Q02487-2|DSC2;ENSG00000134755|ENST00000280904|DSC2	nc|ENSG00000134755|Q02487-2|DSC2	nc|ENSG00000134755|Q02487-2|DSC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8297119140625	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.55097	1	8797	8797		49.442	5.0644	1	1844500			6600	14934	4573	4579	7653	7653					0.10094577919835501
EKRSFTILL	9	Unmodified	_EKRSFTILL_					0	0	0		nc|ENSG00000134755|Q02487-2|DSC2;ENSG00000134755|ENST00000280904|DSC2	nc|ENSG00000134755|Q02487-2|DSC2	nc|ENSG00000134755|Q02487-2|DSC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8303833007812	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.76255	1	9095	9095		35.618	1.4457	1	6402500			6601	14934	4573	4579	7654	7654					0.10094577919835501
EKSAILDLYI	10	Unmodified	_EKSAILDLYI_					0	0	0		nc|ENSG00000288520|G9CGD6-3|CNK3;nc|ENSG00000288520|G9CGD6|CNK3;nc|ENSG00000288520|G9CGD6-2|CNK3;ENSG00000153721|ENST00000607772|CNKSR3;ENST00000433165.6_1_6:154727490-154754936:-|nuORF	nc|ENSG00000288520|G9CGD6-3|CNK3	nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.83251953125	2	582.829172	1163.64379	2.3168	0.0013503	3.6654	0.0021363	5.9821	0.0034866	582.8313275695042	94.548	3.2085	94.489	93.331	96.54	-0.059212					184	75	3	0	0	0	0.85981	1	10117	10117		35.152	7.2698	1	663000			6602	15333	4574	4580	7655	7655					0.06851434617487939
EKSASTTIV	9	Unmodified	_EKSASTTIV_					0	0	0		ENST00000434744.5_1_3:185797852-185798907:-|nuORF	ENST00000434744.5_1_3:185797852-185798907:-|nuORF	ENST00000434744.5_1_3:185797852-185798907:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2552795410156	2	468.25584	934.497126	-0.11516	-5.3922E-05	-2.1055	-0.0009859	-2.2206	-0.0010398	468.25473552954975	82.299	3.2758	82.365	81.1	84.376	0.06591					140	75	2	0	0	0	0.74721	1	8211	8211		37.159	1.9584	1	190410			6603	11698	4575	4581	7656	7656					0.027257574523787298
EKSFKRKKKS	10	Unmodified	_EKSFKRKKKS_					0	0	0			REV__ENST00000467196.5_3_20:2638092-2638937:+|nuORF	REV__ENST00000467196.5_3_20:2638092-2638937:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.22796630859375	3	422.594461	1264.76155	-0.21066	-8.9022E-05	-4.1087	-0.0017363	-4.3194	-0.0018254	422.59275749658315	63.496	0.75026	63.462	63.189	63.939	-0.033714					40	29	2	0	0	0	0.37624	1	6081	6081		14.086	0.57807	1	83063	+		6604	17273	4576	4582	7657	7657					0.13976431996798055
EKSGTIKL	8	Unmodified	_EKSGTIKL_					0	0	0			REV__nc|ENSG00000196440|Q5H9R4-2|ARMCX4	REV__nc|ENSG00000196440|Q5H9R4-2|ARMCX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26153564453125	2	438.263468	874.512382	-1.5749	-0.00069021	4.2465	0.0018611	2.6717	0.0011709	438.26424066079335	39.694	0.79234	39.701	39.118	39.91	0.0065002					37	20	3	0	0	0	0.87064	1	2462	2462		29.15	1.2673	1	140070	+		6605	30131	4577	4583	7658	7658					0.07010669040232642
EKSGTIKL	8	Unmodified	_EKSGTIKL_					0	0	0			REV__nc|ENSG00000196440|Q5H9R4-2|ARMCX4	REV__nc|ENSG00000196440|Q5H9R4-2|ARMCX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2627258300781	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.87792	1	2811	2811		31.53	4.7337	1	22924000	+		6606	30131	4577	4583	7659	7659					0.07010669040232642
EKSGTIKL	8	Unmodified	_EKSGTIKL_					0	0	0			REV__nc|ENSG00000196440|Q5H9R4-2|ARMCX4	REV__nc|ENSG00000196440|Q5H9R4-2|ARMCX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2626953125	2	438.263468	874.512382	0.037237	1.632E-05	-0.30418	-0.00013331	-0.26694	-0.00011699	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.82658	1	2110	2110		21.96	1.9631	1	10667000	+		6607	30131	4577	4583	7660	7660					0.07010669040232642
EKSGTIKL	8	Unmodified	_EKSGTIKL_					0	0	0			REV__nc|ENSG00000196440|Q5H9R4-2|ARMCX4	REV__nc|ENSG00000196440|Q5H9R4-2|ARMCX4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2625732421875	2	438.263468	874.512382	-1.3298	-0.00058278	1.46	0.00063987	0.13025	5.7085E-05	438.2640159596406	58.026	1.8731	58.42	57.697	59.57	0.39407					78	45	2	0	0	0	0.8621	1	6058	6058		26.693	4.733	1	1391400	+		6608	30131	4577	4583	7661	7661					0.07010669040232642
EKSILFGR	8	Unmodified	_EKSILFGR_					0	0	0			REV__nc|ENSG00000105737|Q16478-2|GRIK5	REV__nc|ENSG00000105737|Q16478-2|GRIK5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.2773742675781	2	475.276909	948.539266	-0.75769	-0.00036011	0.7034	0.00033431	-0.054287	-2.5801E-05	475.27711602066205	22.47	0.43904	21.859	21.592	22.031	-0.6107					16	10	2	0	0	0	0.90837	1	914	914		56.721	9.0637	1	102270	+		6609	17566	4578	4584	7662	7662					0.06293777651433174
EKSKKKKG	8	Unmodified	_EKSKKKKG_					0	0	0		ENSG00000091986|ENST00000206423|CCDC80;nc|ENSG00000091986|Q76M96-2|CCDC80	ENSG00000091986|ENST00000206423|CCDC80	ENSG00000091986|ENST00000206423|CCDC80	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.79754638671875	2	466.798009	931.581465	0.35994	0.00016802	-1.4055	-0.00065611	-1.0456	-0.00048809	466.79729216650486	19.702	2.2945	19.233	18.459	20.753	-0.46967					107	51	4	0	0	0	0.79929	1	630	630		18.324	0	1	2065900			6610	1687	4579	4585	7663	7663					0.11293753059806022
EKSKLSLA	8	Unmodified	_EKSKLSLA_					0	0	0		ENSG00000124383|ENST00000244230|MPHOSPH10	ENSG00000124383|ENST00000244230|MPHOSPH10	ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2630310058594	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.87922	1	2096	2096		31.955	0	1	11160000			6611	3331	4580	4586	7664	7664					0.07010669040244011
EKSKSALL	8	Unmodified	_EKSKSALL_					0	0	0			REV__ENSG00000145780|ENST00000274457|FEM1C	REV__ENSG00000145780|ENST00000274457|FEM1C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26300048828125	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.88185	1	3285	3285		32.812	0.85756	1	4268300	+		6612	19967	4581	4587	7665	7665					0.07010669040232642
EKSKSALL	8	Unmodified	_EKSKSALL_					0	0	0			REV__ENSG00000145780|ENST00000274457|FEM1C	REV__ENSG00000145780|ENST00000274457|FEM1C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2628479003906	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.88185	1	2737	2737		32.812	10.853	1	22029000	+		6613	19967	4581	4587	7666	7666					0.07010669040232642
EKSKVTAL	8	Unmodified	_EKSKVTAL_					0	0	0			REV__ENSG00000125810|ENST00000246006|CD93	REV__ENSG00000125810|ENST00000246006|CD93	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26336669921875	2	438.263468	874.512382	-1.8646	-0.00081717	1.0768	0.00047194	-0.78773	-0.00034523	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.8347	1	2912	2912		23.042	2.5607	1	3384400	+		6614	18669	4582	4588	7667	7667					0.07010669040232642
EKSLPPRAEST	11	Unmodified	_EKSLPPRAEST_					0	0	0		ENSG00000152582|ENST00000356031|SPEF2;nc|ENSG00000152582|Q9C093-2|SPEF2;ENST00000503074.1_1_5:35659153-35697983:+|nuORF	ENSG00000152582|ENST00000356031|SPEF2	ENSG00000152582|ENST00000356031|SPEF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	607.8218383789062	2	607.822409	1213.63027	-1.5994	-0.00097214	1.4486	0.00088047	-0.15082	-9.1669E-05	607.8234990043023	58.505	0.43245	58.539	58.367	58.799	0.033905					20	14	2	0	0	0	0.69931	1	5368	5368		31.634	0.10446	1	100890			6615	5186	4583	4589	7668	7668					0.03199576838210305
EKSLSVPVLNM	11	Unmodified	_EKSLSVPVLNM_					0	0	0		ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8;ENSG00000164941|ENST00000523731|INTS8	ENST00000523321.5_1_8:95835614-95871872:+|nuORF	ENST00000523321.5_1_8:95835614-95871872:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.838623046875	2	608.833931	1215.65331	5.7403	0.0034949	0.087047	5.2997E-05	5.8274	0.0035479	608.8338988848703	110.04	0.64108	110.11	109.94	110.58	0.067993					56	22	4	0	0	0	0.732	1	13357	13357		26.063	3.4837	1	3727200			6616	6027	4584	4590	7669	7669					0.05410879631358512
EKSNKKLSSL	10	Unmodified	_EKSNKKLSSL_					0	0	0			REV__chr17:69533820-69536115|26|10.23|0.2|5.71|+|1|None,MAP2K6|1	REV__chr17:69533820-69536115|26|10.23|0.2|5.71|+|1|None,MAP2K6|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.32958984375	2	567.32987	1132.64519	-0.50942	-0.00028901	1.6936	0.00096082	1.1842	0.00067181	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.86225	1	10882	10882		32.751	2.4328	1	5685000	+		6617	15665	4585	4591	7670	7670					0.08417068706262398
EKSSLALK	8	Unmodified	_EKSSLALK_					0	0	0			REV__nc|ENSG00000133858|O60293-2|ZFC3H1	REV__nc|ENSG00000133858|O60293-2|ZFC3H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26348876953125	2	438.263468	874.512382	0.15263	6.689E-05	-0.38156	-0.00016722	-0.22893	-0.00010033	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.86677	1	2028	2028		27.882	0	1	11370000	+		6618	19099	4586	4592	7671	7671					0.07010669040221273
EKSTKLIG	8	Unmodified	_EKSTKLIG_					0	0	0			REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.263427734375	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.89494	1	2175	2175		37.159	0	1	3507500	+		6619	24008	4587	4593	7672	7672					0.07010669040244011
EKSTKLIG	8	Unmodified	_EKSTKLIG_					0	0	0			REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2628173828125	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.89494	1	3012	3012		37.159	0	1	5350400	+		6620	24008	4587	4593	7673	7673					0.07010669040244011
EKSTKLIG	8	Unmodified	_EKSTKLIG_					0	0	0			REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2632751464844	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.8621	1	2685	2685		26.693	0	1	2862500	+		6621	24008	4587	4593	7674	7674					0.07010669040244011
EKSTKLIG	8	Unmodified	_EKSTKLIG_					0	0	0			REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2633361816406	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.87064	2	1933	1842;1933		34.173	2.2177	1	11160000	+		6622	24008	4587	4593	7675;7676	7676					0.07010669040244011
EKSTKLIG	8	Unmodified	_EKSTKLIG_					0	0	0			REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.263427734375	2	438.263468	874.512382	0.15263	6.689E-05	-0.38156	-0.00016722	-0.22893	-0.00010033	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.89494	1	1972	1972		37.159	0	1	11370000	+		6623	24008	4587	4593	7677	7677					0.07010669040244011
EKSTKLIG	8	Unmodified	_EKSTKLIG_					0	0	0			REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2625427246094	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.89494	1	2658	2658		37.159	0	1	22029000	+		6624	24008	4587	4593	7678	7678					0.07010669040244011
EKSTKLIG	8	Unmodified	_EKSTKLIG_					0	0	0			REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2630310058594	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.84341	1	2739	2739		24.203	0	1	21381000	+		6625	24008	4587	4593	7679	7679					0.07010669040244011
EKSTKLIG	8	Unmodified	_EKSTKLIG_					0	0	0			REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2635498046875	2	438.263468	874.512382	0.27759	0.00012166	-1.0434	-0.00045727	-0.76577	-0.00033561	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.8621	2	2677	2677;2809		31.955	1.2427	1	85249000	+		6626	24008	4587	4593	7680;7681	7680					0.07010669040244011
EKSTKLIG	8	Unmodified	_EKSTKLIG_					0	0	0			REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2632751464844	2	438.263468	874.512382	1.5783	0.00069171	-2.4144	-0.0010581	-0.83609	-0.00036643	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.90983	1	2701	2701		42.396	0	1	92475000	+		6627	24008	4587	4593	7682	7682					0.07010669040244011
EKSTKLIG	8	Unmodified	_EKSTKLIG_					0	0	0			REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	REV__nc|ENSG00000275074|Q6ZVK8-2|NUDT18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.261962890625	2	438.263468	874.512382	-1.2747	-0.00055866	-0.66852	-0.00029299	-1.9432	-0.00085165	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.87064	3	3777	3469;3625;3777		51.335	0	1	219150000	+		6628	24008	4587	4593	7683;7684;7685	7685					0.07010669040244011
EKSTLLKG	8	Unmodified	_EKSTLLKG_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2635192871094	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.91472	1	3073	3073		44.117	1.7207	1	5350400	+		6629	23015	4588	4594	7686	7686					0.07010669040232642
EKSTLLKG	8	Unmodified	_EKSTLLKG_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2628173828125	2	438.263468	874.512382	-1.2142	-0.00053214	0.66524	0.00029155	-0.54896	-0.00024059	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.88185	1	3265	3265		32.812	0.85756	1	4828000	+		6630	23015	4588	4594	7687	7687					0.07010669040232642
EKSTLLKG	8	Unmodified	_EKSTLLKG_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2628479003906	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.87479	1	3191	3191		30.504	2.6214	1	4268300	+		6631	23015	4588	4594	7688	7688					0.07010669040232642
EKSTLLKG	8	Unmodified	_EKSTLLKG_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26171875	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.89043	1	2595	2595		35.618	5.1146	1	22029000	+		6632	23015	4588	4594	7689	7689					0.07010669040232642
EKSTLLKG	8	Unmodified	_EKSTLLKG_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2628479003906	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.91472	1	2610	2610		44.117	6.9577	1	21381000	+		6633	23015	4588	4594	7690	7690					0.07010669040232642
EKSVRRPERR	10	Unmodified	_EKSVRRPERR_					0	0	0		ENST00000503886.5_1_10:63170188-63170446:-|nuORF	ENST00000503886.5_1_10:63170188-63170446:-|nuORF	ENST00000503886.5_1_10:63170188-63170446:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.59130859375	3	438.256731	1311.74836	-0.3234	-0.00014173	2.5936	0.0011367	2.2702	0.00099493	438.2578505335394	31.282	0.78612	31.231	30.944	31.731	-0.051031					27	18	2	0	0	0	0.86207	1	1775	1775		24.232	0	1	53179			6634	12895	4589	4595	7691	7691					0.10495993937411185
EKSVSVLFKI	10	Unmodified	_EKSVSVLFKI_					0	0	0			REV__nc|ENSG00000172046|O94966|USP19	REV__nc|ENSG00000172046|O94966|USP19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.345458984375	2	575.347532	1148.68051	-1.0089	-0.00058045	0.10463	6.0201E-05	-0.90424	-0.00052025	575.3486096870474	98.837	5.2928	98.887	98.351	103.64	0.04982					239	125	5	0	0	0	0.85981	3	10427	10417;10427;10523		35.152	12.11	1	4222200	+		6635	30028	4590	4596	7692;7693;7694	7693					0.11211731234061517
EKTELLRKI	9	Unmodified	_EKTELLRKI_					0	0	0		ENSG00000118898|ENST00000345988|PPL	ENSG00000118898|ENST00000345988|PPL	ENSG00000118898|ENST00000345988|PPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.3508911132812	2	565.350606	1128.68666	-0.44927	-0.00025399	0.11847	6.6976E-05	-0.3308	-0.00018702	565.3506345049396	48.648	0.6007	49.117	48.788	49.389	0.46941					36	14	3	0	0	0	0.23176	1	4712	4712		70.816	3.3225	1	1055400			6636	3047	4591	4597	7695	7695					0.12746249465567416
EKTELLRKI	9	Unmodified	_EKTELLRKI_					0	0	0		ENSG00000118898|ENST00000345988|PPL	ENSG00000118898|ENST00000345988|PPL	ENSG00000118898|ENST00000345988|PPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.3507080078125	2	565.350606	1128.68666	0.56097	0.00031715	-0.8018	-0.0004533	-0.24083	-0.00013615	565.3499776913663	48.469	0.56138	49.373	49.085	49.646	0.90424					31	13	3	0	0	0	0.6204	1	4703	4703		45.972	3.108	1	1046300			6637	3047	4591	4597	7696	7696					0.12746249465567416
EKTIIKSG	8	Unmodified	_EKTIIKSG_					0	0	0		ENSG00000126249|ENST00000246535|PDCD2L	ENSG00000126249|ENST00000246535|PDCD2L	ENSG00000126249|ENST00000246535|PDCD2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2629699707031	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.8537	1	2971	2971		25.574	4.6271	1	22924000			6638	3450	4592	4598	7697	7697					0.07010669040232642
EKVADDWFGM	10	Unmodified	_EKVADDWFGM_					0	0	0			REV__nc|ENSG00000204120|Q6Y7W6-4|GIGYF2	REV__nc|ENSG00000204120|Q6Y7W6-4|GIGYF2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.2657470703125	2	599.265881	1196.51721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.488	1	67.453	66.953	67.953	-0.035698								0	0	0	0.45132	1	6480	6480		29.15	1.2673	1		+		6639	23459	4593	4599	7698	7698					-0.07318814879340607
EKVFGAFSVDL	11	Unmodified	_EKVFGAFSVDL_					0	0	0		ENST00000512045.5_1_5:68603732-68603849:-|nuORF	ENST00000512045.5_1_5:68603732-68603849:-|nuORF	ENST00000512045.5_1_5:68603732-68603849:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	606.316162109375	2	606.318971	1210.62339	0.21779	0.00013205	-0.46605	-0.00028258	-0.24826	-0.00015052	606.3188590542012	62.802	0.71771	63.356	63.08	63.797	0.5545					50	16	4	0	0	0	0.65746	1	6766	6766		37.812	1.3648	1	530340			6640	13030	4594	4600	7699	7699					0.026502639576847287
EKVKAVKV	8	Unmodified	_EKVKAVKV_					0	0	0		chr2:99371730-99376465|16|184.69|0.15|10.29|+|2|EIF5B,None|1	chr2:99371730-99376465|16|184.69|0.15|10.29|+|2|EIF5B,None|1	chr2:99371730-99376465|16|184.69|0.15|10.29|+|2|EIF5B,None|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7441101074219	2	450.797478	899.580402	-0.19878	-8.961E-05	0.24946	0.00011245	0.050676	2.2844E-05	450.7974844290274	34.431	0.45206	34.433	34.197	34.649	0.0026054					14	9	2	0	0	0	0.4196	1	2116	2116		12.207	0	1	24193			6641	356	4595	4601	7700	7700					0.12659538690900263
EKVKTKVSAA	10	Unmodified	_EKVKTKVSAA_					0	0	0		ENST00000393389.7_1_11:82905482-82905638:+|nuORF	ENST00000393389.7_1_11:82905482-82905638:+|nuORF	ENST00000393389.7_1_11:82905482-82905638:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.82080078125	2	530.821681	1059.62881	0.86441	0.00045885	-2.3341	-0.001239	-1.4697	-0.00078014	530.8204450676391	80.434	1.3535	80.374	79.998	81.352	-0.059692					100	39	4	0	0	0	0.86802	1	8108	8108		27.047	0.25122	1	626610			6642	11044	4596	4602	7701	7701					0.10137987540133508
EKVLNLIIIPS	11	Unmodified	_EKVLNLIIIPS_					0	0	0			REV__ENSG00000112367|ENST00000230124|FIG4	REV__ENSG00000112367|ENST00000230124|FIG4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2677307128906	3	413.595468	1237.76457	0.26636	0.00011017	2.3863	0.00098696	2.6527	0.0010971	413.59510747480334	48.957	1.14	48.995	48.411	49.551	0.037731					33	27	2	0	0	0	0.17275	1	3696	3696		30.139	2.4952	1	69918	+		6643	17943	4597	4603	7702	7702					0.15520262330960577
EKVLPLIG	8	Unmodified	_EKVLPLIG_					0	0	0		nc|ENSG00000054523|O60333-3|KIF1B	nc|ENSG00000054523|O60333-3|KIF1B	nc|ENSG00000054523|O60333-3|KIF1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7799987792969	2	434.778754	867.542954	-0.30995	-0.00013476	4.1464	0.0018027	3.8364	0.001668	434.78044491218617	37.836	1.2567	38.149	37.864	39.121	0.31312					114	31	4	0	0	0	0.87479	1	3182	3182		30.504	3.7075	1	8178800			6644	14755	4598	4604	7703	7703					0.10388447425305003
EKVSEKLK	8	Unmodified	_EKVSEKLK_					0	0	0			REV__nc|ENSG00000039560|Q9P0K7-4|RAI14	REV__nc|ENSG00000039560|Q9P0K7-4|RAI14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.7915344238281	2	480.78985	959.565146	-0.28471	-0.00013689	1.9197	0.00092295	1.6349	0.00078607	480.7906313540531	21.803	0.59945	21.742	21.496	22.095	-0.061733					24	18	2	0	0	0	0.81897	1	668	668		20.947	0	1	32616	+		6645	29683	4599	4605	7704	7704					0.08374627103057719
EKVYHYFEYEY	11	Unmodified	_EKVYHYFEYEY_					0	0	0			REV__ENSG00000111962|ENST00000367463|UST	REV__ENSG00000111962|ENST00000367463|UST	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.2706298828125	3	523.901397	1568.68236	0.45319	0.00023743	-1.7322	-0.00090749	-1.279	-0.00067006	524.2351038709156	28.258	0.092165	28.294	28.223	28.315	0.03607					4	2	2	0	0	0	0.18216	1	1333	1333		14.086	4.4399	1	13190	+		6646	17908	4600	4606	7705	7705					-0.07923304538644516
EKYIIIDDL	9	Unmodified	_EKYIIIDDL_					0	0	0			REV__ENSG00000102021|ENST00000371920|LUZP4	REV__ENSG00000102021|ENST00000371920|LUZP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.31298828125	2	561.308072	1120.60159	0.39133	0.00021966	4.0242	0.0022588	4.4156	0.0024785	561.3093913762153	55.356	2.8595	55.925	53.691	56.55	0.56836					96	69	3	0	0	0	0.33718	1	5732	5732		62.107	3.3255	1	1532900	+		6647	17319	4601	4607	7706	7706					0.04611459209104396
ELAARRII	8	Unmodified	_ELAARRII_					0	0	0			REV__ENST00000447263.1_1_1:39980824-39982159:+|nuORF	REV__ENST00000447263.1_1_1:39980824-39982159:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2839660644531	2	471.298176	940.581799	-0.92153	-0.00043432	-0.59044	-0.00027827	-1.512	-0.00071259	471.29971941456967	101.95	0.97166	102.15	101.76	102.73	0.19483					46	23	3	0	0	0	0.4196	1	10664	10664		19.36	11.67	1	332850	+		6648	26817	4602	4608	7707	7707					0.10913172779669367
ELAASRGF	8	Unmodified	_ELAASRGF_					0	0	0			REV__ENSG00000132953|ENST00000255305|XPO4	REV__ENSG00000132953|ENST00000255305|XPO4	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	425.7749938964844	2	425.72451	849.434466	-1.8976	-0.00080784	4.0181	0.0017106	2.1206	0.00090278	425.72685563571184	38.9	0.42335	38.9	38.642	39.065	0					12	9	2	0	0	0	0.4196	1	2437	2437		50.025	0	1	20748	+		6649	19047	4603	4609	7708	7708					0.003726561748635504
ELAERGLG	8	Unmodified	_ELAERGLG_					0	0	0		ENST00000249356.3_1_7:108210198-108210453:+|nuORF	ENST00000249356.3_1_7:108210198-108210453:+|nuORF	ENST00000249356.3_1_7:108210198-108210453:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5920104980469	2	422.729792	843.445031	-0.18803	-7.9486E-05	-3.4121	-0.0014424	-3.6001	-0.0015219	422.72939119177545	59.389	0.31096	59.375	59.286	59.597	-0.013729					9	7	2	0	0	0	0.4196	1	5435	5435		18.324	0	1	18115			6650	9288	4604	4610	7709	7709					0.01704638829301075
ELAGRVGL	8	Unmodified	_ELAGRVGL_					0	0	0			REV__ENSG00000146281|ENST00000275072|PM20D2	REV__ENSG00000146281|ENST00000275072|PM20D2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	407.7427673339844	2	407.742702	813.470852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.434	1	22.483	21.983	22.983	0.048553								0	0	0	0.30125	1	666	666		20.482	0	1		+		6651	20004	4605	4611	7710	7710					0.05665533071578466
ELAHWIIHGR	10	Unmodified	_ELAHWIIHGR_					0	0	0		ENSG00000123453|ENST00000439388|SARDH;nc|ENSG00000123453|Q9UL12-2|SARDH	ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.1798095703125	3	411.228001	1230.66217	-0.4048	-0.00016646	-2.5645	-0.0010546	-2.9693	-0.0012211	411.2268437236363	18.942	0.41364	18.868	18.784	19.198	-0.073702					23	11	3	0	0	0	0.37624	1	396	396		6.3209	0.31984	1	104520			6652	3273	4606	4612	7711	7711					0.056070341026725146
ELAHWIIHGR	10	Unmodified	_ELAHWIIHGR_					0	0	0		ENSG00000123453|ENST00000439388|SARDH;nc|ENSG00000123453|Q9UL12-2|SARDH	ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	411.228001	1230.66217	0.9117	0.00037492	-3.9663	-0.0016311	-3.0546	-0.0012561	411.22638600956145	18.62	0.43838	18.693	18.574	19.012	0.073465	-0.11969	-0.00038299	NaN	6.3209	27	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65813			6653	3273	4606	4612							0.056070341026725146
ELAILVVAV	9	Unmodified	_ELAILVVAV_					0	0	0			REV__ENST00000462753.5_1_7:129841718-129841784:-|nuORF	REV__ENST00000462753.5_1_7:129841718-129841784:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8010559082031	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3248	3248		17.365	3.5896	1	942760	+		6654	27062	4607	4613	7712	7712					0.11905003113804469
ELAKIVSAYSD	11	Unmodified	_ELAKIVSAYSD_					0	0	0			REV__ENST00000463285.5_1_1:41461708-41469783:+|nuORF	REV__ENST00000463285.5_1_1:41461708-41469783:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3579711914062	2	598.313886	1194.61322	-0.54756	-0.00032761	1.0694	0.00063983	0.52182	0.00031221	598.3141834273933	59.137	0.49185	59.529	59.359	59.851	0.39209					20	11	2	0	0	0	0.17527	1	6232	6232		40.058	0	1	188270	+		6655	21767	4608	4614	7713	7713					0.02369656232417583
ELAKLKKAHK	10	Unmodified	_ELAKLKKAHK_					0	0	0			REV__ENSG00000151789|ENST00000281523|ZNF385D	REV__ENSG00000151789|ENST00000281523|ZNF385D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.3763427734375	2	583.374415	1164.73428	-0.45026	-0.00026267	4.1254	0.0024066	3.6751	0.002144	583.376632963045	43.234	2.1571	43.207	42.716	44.873	-0.026764					170	50	4	0	0	0	0.86471	1	3282	3282		30.318	4.7437	1	3607200	+		6656	20269	4609	4615	7714	7714					0.1584994845638903
ELAKSKHAL	9	Unmodified	_ELAKSKHAL_					0	0	0		nc|ENSG00000133739|Q9C099-2|LRRCC1;ENSG00000133739|ENST00000360375|LRRCC1	nc|ENSG00000133739|Q9C099-2|LRRCC1	nc|ENSG00000133739|Q9C099-2|LRRCC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.7944030761719	2	498.795466	995.57638	0.17641	8.7992E-05	1.5521	0.00077416	1.7285	0.00086215	498.79609522633086	20.46	0.80788	20.001	19.732	20.54	-0.4591					39	18	3	0	0	0	0.7932	1	668	668		26.693	5.746	1	154980			6657	3891	4610	4616	7715	7715					0.07841449197189831
ELAKWFGGLPS	11	Unmodified	_ELAKWFGGLPS_					0	0	0			REV__ENST00000407418.7_1_22:39261880-39262189:-|nuORF	REV__ENST00000407418.7_1_22:39261880-39262189:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	603.7706909179688	2	602.821681	1203.62881	-0.28594	-0.00017237	4.3401	0.0026163	4.0541	0.0024439	602.8239040733565	49.318	0.52964	49.294	49.103	49.632	-0.024033					18	11	2	0	0	0	0.17462	1	4257	4257		27.047	17.342	1	83596	+		6658	26317	4611	4617	7716	7716					0.035139875401455356
ELAKWFGGLPS	11	Unmodified	_ELAKWFGGLPS_					0	0	0			REV__ENST00000407418.7_1_22:39261880-39262189:-|nuORF	REV__ENST00000407418.7_1_22:39261880-39262189:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	602.821681	1203.62881	-1.0696	-0.00064479	4.6846	0.002824	3.615	0.0021792	602.8241763639974	49.46	0.48624	49.463	49.235	49.722	0.0035934	0.055091	9.6133E-05	NaN	20.837	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	170730	+		6659	26317	4611	4617							0.035139875401455356
ELALGPPLAKP	11	Unmodified	_ELALGPPLAKP_					0	0	0			REV__nc|ENSG00000274211|O14512|SOCS7	REV__nc|ENSG00000274211|O14512|SOCS7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.2406616210938	2	553.334424	1104.6543	-1.9746	-0.0010926	-0.43008	-0.00023798	-2.4047	-0.0013306	553.3339438398306	43.059	0.23734	43.833	43.708	43.945	0.77379					8	5	2	0	0	0	0.17431	1	3881	3881		24.519	0	1	96059	+		6660	23998	4612	4618	7717	7717					0.10615462062560255
ELALLPPPP	9	Unmodified	_ELALLPPPP_					0	0	0		ENST00000584214.1_1_17:16253243-16256750:-|nuORF;ENSG00000166582|ENST00000299736|CENPV;nc|ENSG00000166582|Q7Z7K6|CENPV	ENST00000584214.1_1_17:16253243-16256750:-|nuORF	ENST00000584214.1_1_17:16253243-16256750:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.7825622558594	2	473.784036	945.553519	-0.42615	-0.0002019	-1.9902	-0.0009429	-2.4163	-0.0011448	473.7828976830325	21.758	0.79819	21.7	21.484	22.282	-0.057203					55	31	3	0	0	0	0.7932	1	656	656		26.796	1.3459	1	107510			6661	6213	4613	4619	7718	7718					0.07856430079709753
ELALPLPG	8	Unmodified	_ELALPLPG_					0	0	0			REV__ENST00000445067.6_1_1:111781441-111783961:+|nuORF	REV__ENST00000445067.6_1_1:111781441-111783961:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.23687744140625	2	405.242004	808.469455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.533	1	63.527	63.027	64.027	-0.0055504								0	0	0	0.29694	1	5909	5909		37.028	7.1869	1		+		6662	26793	4614	4620	7719	7719					0.05755898982806684
ELALTRPHAL	10	Unmodified	_ELALTRPHAL_					0	0	0			REV__ENSG00000187566|ENST00000340650|NHLRC1	REV__ENSG00000187566|ENST00000340650|NHLRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8263549804688	2	560.827298	1119.64004	-0.09953	-5.5819E-05	-1.8691	-0.0010482	-1.9686	-0.0011041	560.8260922946897	50.931	0.59262	50.839	50.585	51.178	-0.091797					43	16	3	0	0	0	0.8651	1	4041	4041		25.574	1.0549	1	1039600	+		6663	22925	4615	4621	7720	7720					0.08500809634256257
ELALWAFRK	9	Unmodified	_ELALWAFRK_					0	0	0		nc|ENSG00000130294|Q12756-2|KIF1A;ENSG00000130294|ENST00000498729|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	nc|ENSG00000130294|Q12756-2|KIF1A	nc|ENSG00000130294|Q12756-2|KIF1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3280639648438	2	567.326934	1132.63931	2.9361	0.0016657	2.1523	0.0012211	5.0884	0.0028868	567.3279847475538	112.89	1.1902	112.87	112.7	113.89	-0.024811					63	32	3	0	0	0	0.7932	1	12528	12528		24.203	2.2429	1	1057400			6664	3630	4616	4622	7721	7721					0.07830014985211164
ELALWAFRK	9	Unmodified	_ELALWAFRK_					0	0	0		nc|ENSG00000130294|Q12756-2|KIF1A;ENSG00000130294|ENST00000498729|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	nc|ENSG00000130294|Q12756-2|KIF1A	nc|ENSG00000130294|Q12756-2|KIF1A	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	567.326934	1132.63931	-1.3958	-0.0007919	7.3329	0.0041602	5.9371	0.0033683	567.3309646339146	113.19	0.20975	113.16	113.01	113.22	-0.032326	0.15099	0.0048341	NaN	24.203	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	776220			6665	3630	4616	4622							0.07830014985211164
ELALWAFRK	9	Unmodified	_ELALWAFRK_					0	0	0		nc|ENSG00000130294|Q12756-2|KIF1A;ENSG00000130294|ENST00000498729|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	nc|ENSG00000130294|Q12756-2|KIF1A	nc|ENSG00000130294|Q12756-2|KIF1A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	567.326934	1132.63931	2.2408	0.0012712	3.0042	0.0017044	5.245	0.0029756	567.3285023109609	112.96	0.32044	112.99	112.83	113.15	0.030602	-0.011252	-7.7432E-05	NaN	24.203	26	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108510			6666	3630	4616	4622							0.07830014985211164
ELAMRQLV	8	Unmodified	_ELAMRQLV_					0	0	0		ENSG00000108759|ENST00000225899|KRT32;CON__Q14532	ENSG00000108759|ENST00000225899|KRT32	ENSG00000108759|ENST00000225899|KRT32	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27740478515625	2	480.27077	958.526987	0.25791	0.00012387	2.1183	0.0010174	2.3762	0.0011412	480.27172445042174	81.206	0.15538	81.627	81.51	81.666	0.42149					5	3	2	0	0	0	0.4196	1	9345	9345		31.955	0	1	56285		+	6667	606	4617	4623	7722	7722					0.04606417916727423
ELAPRTIVF	9	Unmodified	_ELAPRTIVF_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|153|3|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|153|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.305667	1044.59678	-0.83281	-0.00043582	-3.2133	-0.0016815	-4.0461	-0.0021173	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.76255	1	8346	8346		35.618	5.1146	1	2778600	+		6668	29588	4618	4624	7723	7723					0.0762661985700106
ELAPRTIVF	9	Unmodified	_ELAPRTIVF_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|153|3|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|153|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3037719726562	2	523.305667	1044.59678	-0.7542	-0.00039468	-3.0063	-0.0015732	-3.7605	-0.0019679	523.3039964981095	91.826	2.332	91.826	91.507	93.839	0					135	53	3	0	0	0	0.76764	2	8949	8949;9020		34.173	2.6427	1	769560	+		6669	29588	4618	4624	7724;7725	7724					0.0762661985700106
ELAPRTIVF	9	Unmodified	_ELAPRTIVF_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|153|3|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|153|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.30419921875	2	523.305667	1044.59678	-0.178	-9.3149E-05	-4.0857	-0.0021381	-4.2637	-0.0022312	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.77244	1	8334	8334		32.812	3.6629	1	4158500	+		6670	29588	4618	4624	7726	7726					0.0762661985700106
ELAPRTIVF	9	Unmodified	_ELAPRTIVF_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|153|3|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|153|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3036499023438	2	523.305667	1044.59678	-1.5391	-0.00080541	-2.1942	-0.0011482	-3.7333	-0.0019536	523.3043931360254	91.382	2.3991	91.563	91.237	93.636	0.18029					145	56	4	0	0	0	0.78536	1	9210	9210		29.15	1.0681	1	1040100	+		6671	29588	4618	4624	7727	7727					0.0762661985700106
ELAQMGLNFW	10	Unmodified	_ELAQMGLNFW_					0	0	0		ENSG00000132669|ENST00000255006|RIN2;nc|ENSG00000132669|Q8WYP3-2|RIN2	ENSG00000132669|ENST00000255006|RIN2	ENSG00000132669|ENST00000255006|RIN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5753173828125	3	403.53047	1207.56958	-0.15711	-6.3397E-05	1.8967	0.00076536	1.7396	0.00070197	403.5313445644435	80.779	0.20188	81.306	81.244	81.446	0.52676					6	4	2	0	0	0	0.37624	1	9334	9334		24.232	0	1	27262			6672	3816	4619	4625	7728	7728					-0.025902317456939272
ELARAKKRRK	10	Unmodified	_ELARAKKRRK_					0	0	0			REV__ENSG00000162889|ENST00000367103|MAPKAPK2	REV__ENSG00000162889|ENST00000367103|MAPKAPK2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.2685852050781	3	419.273834	1254.79967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.785	1	49.692	49.192	50.192	-0.093178								0	0	0	0.45132	1	3874	3874		23.378	1.5975	1		+		6673	20860	4620	4626	7729	7729					0.1824636270209794
ELARIKLRALG	11	Unmodified	_ELARIKLRALG_					0	0	0			REV__ENSG00000163013|ENST00000520530|FBXO41	REV__ENSG00000163013|ENST00000520530|FBXO41	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9327392578125	3	413.934706	1238.78229	-1.8924	-0.00078334	-2.7536	-0.0011398	-4.6461	-0.0019232	413.93347709098015	44.87	2.8248	44.882	43.566	46.391	0.012058					191	71	4	0	0	0	0.72892	1	3052	3052		26.75	4.9693	1	675440	+		6674	20872	4621	4627	7730	7730					0.1724502237645993
ELARRPVRAL	10	Unmodified	_ELARRPVRAL_					0	0	0			REV__ENSG00000170382|ENST00000367177|LRRN2	REV__ENSG00000170382|ENST00000367177|LRRN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.3695068359375	2	590.867289	1179.72002	1.3812	0.0008161	-2.2271	-0.0013159	-0.8459	-0.00049981	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.86348	1	12577	12577		31.53	1.2121	1	6168400	+		6675	21654	4622	4628	7731	7731					0.13735296028130506
ELARTASPL	9	Unmodified	_ELARTASPL_					0	0	0			REV__nc|ENSG00000159140|P18583-6|SON	REV__nc|ENSG00000159140|P18583-6|SON	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2243347167969	2	479.271824	956.529095	0.37751	0.00018093	-1.0856	-0.00052027	-0.70804	-0.00033935	479.2711066983224	32.164	0.3441	32.291	32.073	32.417	0.12642					13	7	2	0	0	0	0.20789	1	2225	2225		26.693	4.733	1	112910	+		6676	20639	4623	4629	7732	7732					0.04909169926179402
ELASLLGLL	9	Unmodified	_ELASLLGLL_					0	0	0			REV__ENSG00000188822|ENST00000374472|CNR2	REV__ENSG00000188822|ENST00000374472|CNR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7906494140625	2	464.789318	927.564084	-0.5794	-0.0002693	3.5758	0.001662	2.9964	0.0013927	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.69914	1	2227	2227		40.573	4.9543	1	409180	+		6677	23034	4624	4630	7733	7733					0.09740412734140591
ELATKFLKL	9	Unmodified	_ELATKFLKL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8168334960938	2	531.831517	1061.64848	-0.05015	-2.6672E-05	2.3239	0.0012359	2.2738	0.0012093	531.8330366570972	88.52	0.12259	88.727	88.667	88.79	0.20731					4	2	2	0	0	0	0.20789	1	8794	8794		16.473	0.83134	1	78308	+		6678	19958	4625	4631	7734	7734					0.12012363550888949
ELATKLFAM	9	Unmodified	_ELATKLFAM_					0	0	0			REV__ENSG00000138382|ENST00000260953|METTL5	REV__ENSG00000138382|ENST00000260953|METTL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2814331054688	2	512.280803	1022.54705	0.38138	0.00019537	0.68002	0.00034836	1.0614	0.00054374	512.2810762358159	86.258	3.4931	86.314	85.063	88.556	0.055649					143	81	2	0	0	0	0.72402	1	8835	8835		38.806	1.647	1	344420	+		6679	19467	4626	4632	7735	7735					0.036681688566886805
ELAWDTHLS	9	Unmodified	_ELAWDTHLS_					0	0	0			REV__nc|ENSG00000128805|Q7Z5H3-4|ARHGAP22	REV__nc|ENSG00000128805|Q7Z5H3-4|ARHGAP22	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.9578247070312	2	536.258914	1070.50327	-1.7118	-0.00091797	-1.9722	-0.0010576	-3.684	-0.0019756	536.7600780915276	42.273	0.19685	42.686	42.626	42.823	0.4139					6	4	2	0	0	0	0.20789	1	3753	3753		11.511	0	1	90299	+		6680	18792	4627	4633	7736	7736					-0.029157243160852886
ELCIPMLLA	9	Unmodified	_ELCIPMLLA_					0	0	0			REV__ENST00000307954.12_1_5:131055067-131080342:-|nuORF	REV__ENST00000307954.12_1_5:131055067-131080342:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29022216796875	2	501.771757	1001.52896	0.69011	0.00034628	-4.1504	-0.0020825	-3.4602	-0.0017363	501.76970356087304	88.359	3.5993	88.509	86.444	90.044	0.15054					133	84	2	0	0	0	0.20789	1	8789	8789		24.203	0	1	141410	+		6681	24856	4628	4634	7737	7737					0.028257106103183105
ELCSVGVATP	10	Carbamidomethyl (C)	_ELC(Carbamidomethyl (C))SVGVATP_	ELC(1)SVGVATP		ELC(42)SVGVATP		0	1	0			REV__chr10:53026127-53029892|33|64.94|0.0|22.63|-|1|TE_info:HERV30-int,HERV30-int_dup42,ERV1,LTR,acceptor,-,53025889,53026127|None,LINC02672|2	REV__chr10:53026127-53029892|33|64.94|0.0|22.63|-|1|TE_info:HERV30-int,HERV30-int_dup42,ERV1,LTR,acceptor,-,53025889,53026127|None,LINC02672|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7539672851562	2	516.755149	1031.49575	0.68105	0.00035194	-4.3526	-0.0022492	-3.6715	-0.0018973	516.7528621165293	66.309	0.95288	66.695	66.283	67.236	0.38581					46	25	3	0	0	0	0.74274	1	7236	7236		42.396	6.7778	1	265940	+		6682	15475	4629	4635	7738	7738	204				-0.018741999080248206
ELCVPLIEVL	10	Unmodified	_ELCVPLIEVL_					0	0	0			REV__ENST00000478553.1_1_20:4764321-4764459:-|nuORF	REV__ENST00000478553.1_1_20:4764321-4764459:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.3178100585938	2	564.322668	1126.63078	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.076	1	56.076	55.576	56.576	0								0	0	0	0.45132	1	4791	4791		27.882	2.3082	1		+		6683	27383	4630	4636	7739	7739					0.07253280233749138
ELDAAAQPE	9	Unmodified	_ELDAAAQPE_					0	0	0		ENST00000588207.1_1_18:57636769-57637372:+|nuORF	ENST00000588207.1_1_18:57636769-57637372:+|nuORF	ENST00000588207.1_1_18:57636769-57637372:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2225646972656	2	472.221997	942.429441	0.21504	0.00010155	-0.092078	-4.3481E-05	0.12296	5.8067E-05	472.2219574332987	38.584	0.60174	38.678	38.396	38.997	0.094322					38	18	3	0	0	0	0.74721	1	2323	2323		37.159	0	1	210410			6684	14209	4631	4637	7740	7740					-0.0440769247843491
ELDERGGDPQI	11	Unmodified	_ELDERGGDPQI_					0	0	0			REV__ENST00000318560.5_1_9:133738379-133747583:+|nuORF	REV__ENST00000318560.5_1_9:133738379-133747583:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	614.7985229492188	2	614.793849	1227.57314	-0.010947	-6.7302E-06	0.33704	0.00020721	0.32609	0.00020048	614.7938481948718	30.265	0.51124	30.29	29.972	30.483	0.025013					28	12	3	0	0	0	0.6493	1	1542	1542		38.754	2.3069	1	75421	+		6685	24977	4632	4638	7741	7741					-0.03153890438125018
ELDGLVTVV	9	Unmodified	_ELDGLVTVV_					0	0	0			REV__nc|ENSG00000134369|Q8NEY1-6|NAV1	REV__nc|ENSG00000134369|Q8NEY1-6|NAV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7665100097656	2	472.768583	943.522613	-0.41041	-0.00019403	-2.299	-0.0010869	-2.7094	-0.0012809	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.7932	1	8314	8314		21.96	0.25755	1	590200	+		6686	19136	4633	4639	7742	7742					0.04859231974819522
ELDLDNKIL	9	Unmodified	_ELDLDNKIL_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.3012084960938	2	536.797872	1071.58119	-0.98554	-0.00052903	0.68899	0.00036985	-0.29655	-0.00015919	536.7980547573918	57.208	0.64578	57.602	57.284	57.929	0.39408					28	15	3	0	0	0	0.6204	1	5933	5933		45.972	0	1	659110	+		6687	23025	4634	4640	7743	7743					0.04826288549293167
ELDLSDKNVF	10	Unmodified	_ELDLSDKNVF_					0	0	0		nc|ENSG00000249961|Q8NA31-3|TERB1;nc|ENSG00000249961|Q8NA31-2|TERB1;ENSG00000249961|ENST00000433154|TERB1	nc|ENSG00000249961|Q8NA31-3|TERB1	nc|ENSG00000249961|Q8NA31-3|TERB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.3051147460938	2	590.298236	1178.58192	-0.57482	-0.00033932	0.59341	0.00035029	0.01859	1.0973E-05	590.2985951461947	52.66	0.89941	52.657	52.114	53.013	-0.0033035					30	23	2	0	0	0	0.77314	1	4575	4575		40.778	11.608	1	105080			6688	8842	4635	4641	7744	7744					-0.00022916801685823884
ELDPVLPG	8	Unmodified	_ELDPVLPG_					0	0	0			REV__nc|ENSG00000124356|O95630-2|STAMBP	REV__nc|ENSG00000124356|O95630-2|STAMBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2275695800781	2	420.229094	838.443634	-1.4714	-0.00061832	-1.5274	-0.00064185	-2.9988	-0.0012602	420.22834377301643	76.819	2.0914	76.909	74.945	77.036	0.089363					112	66	2	0	0	0	0.86288	1	7087	7087		26.796	1.3459	1	246920	+		6689	18581	4636	4642	7745	7745					0.017950047405292935
ELDSDDSFNVK	11	Unmodified	_ELDSDDSFNVK_					0	0	0			REV__nc|ENSG00000135476|Q14674-2|ESPL1	REV__nc|ENSG00000135476|Q14674-2|ESPL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.52520751953125	3	423.526218	1267.55683	0.79693	0.00033752	-2.7132	-0.0011491	-1.9163	-0.00081158	423.52500661112157	24.422	0.98644	24.093	23.717	24.703	-0.32825					55	21	4	0	0	0	0.64964	1	1174	1174		38.714	4.7925	1	958090	+		6690	19228	4637	4643	7746	7746					-0.06625016394923477
ELDSDDSFNVK	11	Unmodified	_ELDSDDSFNVK_					0	0	0			REV__nc|ENSG00000135476|Q14674-2|ESPL1	REV__nc|ENSG00000135476|Q14674-2|ESPL1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	423.526218	1267.55683	0.79693	0.00033752	-2.7132	-0.0011491	-1.9163	-0.00081158	423.52500661112157	24.422	0.98644	24.093	23.717	24.703	-0.32825	0.13827	0.0009835	NaN	38.714	55	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	958090	+		6691	19228	4637	4643							-0.06625016394923477
ELDSDDSFNVK	11	Unmodified	_ELDSDDSFNVK_					0	0	0			REV__nc|ENSG00000135476|Q14674-2|ESPL1	REV__nc|ENSG00000135476|Q14674-2|ESPL1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	423.526218	1267.55683	1.8662	0.00079037	-3.9976	-0.0016931	-2.1314	-0.00090272	423.52446519002046	24.33	0.9667	23.817	23.533	24.499	-0.51365	-0.13827	-0.00064846	NaN	38.714	48	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	864980	+		6692	19228	4637	4643							-0.06625016394923477
ELDTAFMY	8	Unmodified	_ELDTAFMY_					0	0	0		ENST00000492217.1_1_1:19634582-19638531:-|nuORF;ENSG00000053371|ENST00000235835|AKR7A2	ENST00000492217.1_1_1:19634582-19638531:-|nuORF	ENST00000492217.1_1_1:19634582-19638531:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	495.835205078125	2	495.217869	988.421184	-0.68116	-0.00033732	-1.4809	-0.00073337	-2.1621	-0.0010707	495.21705178455255	39.912	0.39653	39.919	39.675	40.071	0.0065002					16	9	2	0	0	0	0.4196	1	2469	2469		12.959	0	1	79443			6693	1007	4638	4644	7747	7747					-0.07348962719402152
ELDVGQGSVSI	11	Unmodified	_ELDVGQGSVSI_					0	0	0		ENSG00000172409|ENST00000533682|CLP1	ENSG00000172409|ENST00000533682|CLP1	ENSG00000172409|ENST00000533682|CLP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.8077392578125	2	552.282586	1102.55062	-0.28346	-0.00015655	3.448	0.0019043	3.1645	0.0017477	552.2845578696993	68.143	0.45825	68.691	68.493	68.951	0.54819					14	10	2	0	0	0	0.17376	1	7488	7488		20.03	17.101	1	79521			6694	6770	4639	4645	7748	7748					0.0034451016426828573
ELDVKTDKEDI	11	Unmodified	_ELDVKTDKEDI_					0	0	0		nc|ENSG00000114487|Q86VD1-2|MORC1;ENSG00000114487|ENST00000232603|MORC1	nc|ENSG00000114487|Q86VD1-2|MORC1	nc|ENSG00000114487|Q86VD1-2|MORC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77996826171875	3	435.557519	1303.65073	0.13014	5.6685E-05	-1.0986	-0.00047851	-0.96847	-0.00042182	435.5569205536852	40.376	0.81035	40.385	40.03	40.84	0.0092773					51	20	4	0	0	0	0.17365	1	2861	2861		21.032	0	1	1210500			6695	2774	4640	4646	7749	7749					0.011047027073800564
ELDVLENNL	9	Unmodified	_ELDVLENNL_					0	0	0		ENST00000375206.6_1_9:100008408-100053768:+|nuORF;ENST00000375204.2_1_9:100008408-100054866:+|nuORF;ENST00000527128.5_1_9:100008408-100053855:+|nuORF	ENST00000375206.6_1_9:100008408-100053768:+|nuORF	ENST00000375206.6_1_9:100008408-100053768:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.7703247070312	2	529.771854	1057.52915	-0.78284	-0.00041473	-1.259	-0.00066701	-2.0419	-0.0010817	529.7708561271895	67.269	0.86028	67.321	67.009	67.869	0.052376					76	31	4	0	0	0	0.77696	1	6018	6018		31.53	1.0262	1	630540			6696	10792	4641	4647	7750	7750					0.002691251355145141
ELEAALGLLDI	11	Unmodified	_ELEAALGLLDI_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	578.8259887695312	2	578.826629	1155.63871	0.5582	0.0003231	-3.5838	-0.0020744	-3.0256	-0.0017513	578.8243737901447	65.109	0.42558	65.235	65.039	65.464	0.12532					36	21	2	0	0	0	0.66929	1	5779	5779		36.447	4.4919	1	309860			6697	1611	4642	4648	7751	7751					0.06711130754842998
ELEAALGLLDI	11	Unmodified	_ELEAALGLLDI_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	578.826629	1155.63871	-0.85413	-0.0004944	-1.8225	-0.0010549	-2.6766	-0.0015493	578.8255247353796	65.318	0.42722	65.318	65.131	65.558	0	0.050632	0.00058035	NaN	36.447	39	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	202550			6698	1611	4642	4648							0.06711130754842998
ELEAALGLLDI	11	Unmodified	_ELEAALGLLDI_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	578.826629	1155.63871	-0.0099214	-5.7428E-06	-2.9756	-0.0017223	-2.9855	-0.0017281	578.8248510195858	65.218	0.38277	65.183	65.028	65.41	-0.034798	-0.084735	-0.00075458	NaN	36.447	33	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	259420			6699	1611	4642	4648							0.06711130754842998
ELEAALGLLDI	11	Unmodified	_ELEAALGLLDI_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	578.826629	1155.63871	-0.93932	-0.0005437	-1.7028	-0.00098561	-2.6421	-0.0015293	578.8254757012564	65.245	0.29413	65.272	65.107	65.401	0.027138	0.0044452	0.0007189	NaN	36.447	27	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123220			6700	1611	4642	4648							0.06711130754842998
ELEAALGLLDI	11	Unmodified	_ELEAALGLLDI_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	578.826629	1155.63871	0.60204	0.00034847	-3.0721	-0.0017782	-2.47	-0.0014297	578.8247746478893	65.093	0.45119	65.218	65.019	65.47	0.12545	-0.049657	-0.00086625	NaN	36.447	32	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	302920			6701	1611	4642	4648							0.06711130754842998
ELEAALGLLDI	11	Unmodified	_ELEAALGLLDI_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	578.826629	1155.63871	-0.55116	-0.00031903	-2.0529	-0.0011883	-2.6041	-0.0015073	578.8252293904699	65.248	0.34756	65.285	65.115	65.462	0.037849	0.017694	0.00031354	NaN	36.447	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	205380			6702	1611	4642	4648							0.06711130754842998
ELEAQLRLVK	10	Unmodified	_ELEAQLRLVK_					0	0	0			REV__nc|ENSG00000177548|Q9H5N1-2|RABEP2	REV__nc|ENSG00000177548|Q9H5N1-2|RABEP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5816955566406	3	400.243317	1197.70812	3.4091	0.0013645	1.9878	0.00079562	5.3969	0.0021601	400.5787645244333	114.6	0.14986	114.61	114.56	114.71	0.0094528					7	5	2	0	0	0	0.86718	1	13837	13837		20.03	0.7678	1	51341	+		6703	22216	4643	4649	7752	7752					0.11717634494266349
ELEDTVIPPE	10	Unmodified	_ELEDTVIPPE_					0	0	0			REV__nc|ENSG00000061987|Q7Z3U7-2|MON2	REV__nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.2847290039062	2	571.284794	1140.55504	-0.1553	-8.8719E-05	-2.0195	-0.0011537	-2.1748	-0.0012424	571.2835995434102	28.442	0.50924	28.402	28.022	28.532	-0.039907					15	11	2	0	0	0	0.86718	1	1424	1424		27.882	4.8398	1	22387	+		6704	16458	4644	4650	7753	7753					-0.009620254128321903
ELEDTVIPPE	10	Unmodified	_ELEDTVIPPE_					0	0	0			REV__nc|ENSG00000061987|Q7Z3U7-2|MON2	REV__nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	571.284794	1140.55504	1.0688	0.00061057	-2.7651	-0.0015797	-1.6964	-0.00096911	571.2832280683268	28.552	0.59175	28.533	28.119	28.711	-0.019407	0.065449	-0.00068565	NaN	27.882	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22696	+		6705	16458	4644	4650							-0.009620254128321903
ELEEEEQKE	9	Unmodified	_ELEEEEQKE_					0	0	0		ENSG00000249437|ENST00000517649|NAIP;ENST00000519014.1_1_5:70307584-70316500:-|nuORF	ENSG00000249437|ENST00000517649|NAIP	ENSG00000249437|ENST00000517649|NAIP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.2826538085938	2	581.75914	1161.50373	-1.4386	-0.0008369	2.1309	0.0012397	0.69236	0.00040279	581.7602763032569	38.718	0.76166	39.24	38.952	39.714	0.52235					31	17	2	0	0	0	0.20789	1	3278	3278		58.23	12.258	1	238770			6706	8837	4645	4651	7754	7754					-0.0705639417758448
ELEEMGAM	8	Unmodified	_ELEEMGAM_					0	0	0		nc|ENSG00000273540|Q96MI9|AGBL1;ENSG00000273540|ENST00000614907|AGBL1	nc|ENSG00000273540|Q96MI9|AGBL1	nc|ENSG00000273540|Q96MI9|AGBL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.1872253417969	2	455.188254	908.361955	-0.32073	-0.00014599	0.99401	0.00045246	0.67328	0.00030647	455.1885863451267	25.185	1.5803	25.144	24.803	26.383	-0.041168					52	39	3	0	0	0	0.90024	1	1062	1062		39.021	13.447	1	75484			6707	15313	4646	4652	7755	7755					-0.09589182005220209
ELEIALLV	8	Unmodified	_ELEIALLV_					0	0	0		ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.27313232421875	2	450.276044	898.537535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.55	1	113.58	113.08	114.08	0.027321								0	0	0	0.29498	1	12410	12410		26.796	3.7536	1				6708	7672	4647	4653	7756	7756					0.08420723842823463
ELEILIGL	8	Unmodified	_ELEILIGL_					0	0	0			REV__chr1:150262620-150263299|35|47.31|0.18|8.0|+|0|CA14,CA14|1	REV__chr1:150262620-150263299|35|47.31|0.18|8.0|+|0|CA14,CA14|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2742919921875	2	450.276044	898.537535	-0.14122	-6.3587E-05	-3.5809	-0.0016124	-3.7221	-0.001676	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.88915	1	9606	9606		35.201	0	1	47650000	+		6709	15413	4648	4654	7757	7757					0.08420723842812095
ELEILIGL	8	Unmodified	_ELEILIGL_					0	0	0			REV__chr1:150262620-150263299|35|47.31|0.18|8.0|+|0|CA14,CA14|1	REV__chr1:150262620-150263299|35|47.31|0.18|8.0|+|0|CA14,CA14|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2740173339844	2	450.276044	898.537535	-1.2506	-0.00056311	-2.4536	-0.0011048	-3.7041	-0.0016679	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.86791	1	9630	9630		28.254	0	1	44812000	+		6710	15413	4648	4654	7758	7758					0.08420723842812095
ELEILIVK	8	Unmodified	_ELEILIVK_					0	0	0			REV__nc|ENSG00000115598|Q9HB29-2|IL1RL2	REV__nc|ENSG00000115598|Q9HB29-2|IL1RL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.79986572265625	2	478.804968	955.595384	-2.1913	-0.0010492	2.7461	0.0013148	0.55482	0.00026565	478.8061406240579	40.099	1.5963	40.688	39.312	40.908	0.58915					89	37	4	0	0	0	0.84341	1	3433	3433		24.203	1.1603	1	1970000	+		6711	18134	4649	4655	7759	7759					0.11580985768239316
ELEKHKTAFV	10	Unmodified	_ELEKHKTAFV_					0	0	0		ENST00000490517.5_1_17:17897468-17907868:+|nuORF;nc|ENSG00000171962|Q9H069-2|DRC3;ENSG00000171962|ENST00000399187|DRC3	ENST00000490517.5_1_17:17897468-17907868:+|nuORF	ENST00000490517.5_1_17:17897468-17907868:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.8568725585938	2	601.332413	1200.65027	-0.2745	-0.00016507	-4.0996	-0.0024652	-4.3741	-0.0026303	601.3284866993349	103.36	0.89317	103.4	103.11	104	0.041481					28	21	2	0	0	0	0.37624	1	11296	11296		25.574	12.12	1	167620			6712	6728	4650	4656	7760	7760					0.057973725688498234
ELEKILDLHI	10	Unmodified	_ELEKILDLHI_					0	0	0			REV__nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	REV__nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.2395324707031	3	408.239573	1221.69689	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.651	1	27.762	27.262	28.262	0.11117								0	0	0	0.45132	1	1108	1108		28.081	3.8497	1		+		6713	30070	4651	4657	7761	7761					0.0949081240016767
ELEKILKQ	8	Unmodified	_ELEKILKQ_					0	0	0			REV__nc|ENSG00000126001|Q9BV73-2|CEP250	REV__nc|ENSG00000126001|Q9BV73-2|CEP250	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.3064270019531	2	500.8055	999.596446	0.49653	0.00024867	4.0414	0.0020239	4.5379	0.0022726	500.8074981328797	16.636	0.6548	16.026	15.82	16.475	-0.6107					20	14	2	0	0	0	0.4196	1	153	153		63.306	0	1	1416000	+		6714	18690	4652	4658	7762	7762					0.09663200137151762
ELEKSVEDAGI	11	Unmodified	_ELEKSVEDAGI_					0	0	0		ENSG00000008311|ENST00000417368|AASS	ENSG00000008311|ENST00000417368|AASS	ENSG00000008311|ENST00000417368|AASS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	595.8013305664062	2	595.300975	1188.5874	-0.72423	-0.00043114	1.7407	0.0010362	1.0165	0.00060511	595.3020963524062	40.675	0.38486	40.634	40.308	40.693	-0.040806					17	9	2	0	0	0	0.66929	1	2990	2990		36.447	1.2947	1	131650			6715	742	4653	4659	7763	7763					0.0006476199016560713
ELEKSVEDAGI	11	Unmodified	_ELEKSVEDAGI_					0	0	0		ENSG00000008311|ENST00000417368|AASS	ENSG00000008311|ENST00000417368|AASS	ENSG00000008311|ENST00000417368|AASS	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	595.300975	1188.5874	-2.6391	-0.0015711	3.6384	0.0021659	0.99924	0.00059485	595.3030141436187	40.49	0.43793	40.497	40.274	40.712	0.0065727	-0.068613	0.0011257	NaN	36.447	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137420			6716	742	4653	4659							0.0006476199016560713
ELEKTCCCK	9	Carbamidomethyl (C)	_ELEKTCCC(Carbamidomethyl (C))K_	ELEKTC(0.073)C(0.312)C(0.615)K		ELEKTC(-9.2)C(-3)C(3)K		0	1	0		ENST00000238831.8_1_2:32530721-32530832:+|nuORF	ENST00000238831.8_1_2:32530721-32530832:+|nuORF	ENST00000238831.8_1_2:32530721-32530832:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.2384033203125	2	557.240495	1112.46644	-0.45944	-0.00025602	-3.2441	-0.0018077	-3.7035	-0.0020638	557.2386471405131	28.115	0.32037	28.151	28.021	28.341	0.03607					19	11	2	0	0	0	0.64555	1	1322	1322		44.377	7.2181	3	41354			6717	9243	4654	4660	7764	7764	118				-0.08529803520195856
ELEKVLPQTIL	11	Unmodified	_ELEKVLPQTIL_					0	0	0		ENSG00000011275|ENST00000389902|RNF216;nc|ENSG00000011275|Q9NWF9|RNF216;nc|ENSG00000011275|Q9NWF9-3|RNF216	ENSG00000011275|ENST00000389902|RNF216	ENSG00000011275|ENST00000389902|RNF216	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8823852539062	2	641.884478	1281.7544	0.89498	0.00057447	-4.1498	-0.0026637	-3.2548	-0.0020892	641.8816647321656	95.707	2.6304	95.87	94.248	96.878	0.16316					218	62	4	0	0	0	0.638	1	9885	9885		40.058	0.80534	1	2156900			6718	786	4655	4661	7765	7765					0.12479654605704127
ELELEVIN	8	Unmodified	_ELELEVIN_					0	0	0		nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A	nc|ENSG00000090889|O95239-2|KIF4A	nc|ENSG00000090889|O95239-2|KIF4A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3090515136719	2	479.758215	957.501877	0.29432	0.0001412	1.0437	0.00050071	1.338	0.00064191	479.7585676398133	46.497	0.55294	46.535	46.369	46.922	0.038181					23	14	2	0	0	0	0.4196	1	3422	3422		37.159	9.2769	1	89994			6719	1658	4656	4662	7766	7766					0.021426415951509625
ELELKEELVAV	11	Unmodified	_ELELKEELVAV_					0	0	0			REV__nc|ENSG00000119397|Q7Z7A1-5|CNTRL	REV__nc|ENSG00000119397|Q7Z7A1-5|CNTRL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.9100341796875	3	424.574621	1270.70203	-0.63518	-0.00026968	1.6601	0.00070486	1.025	0.00043517	424.57529905908024	30.968	0.66203	31.048	30.722	31.384	0.079834					36	14	3	0	0	0	0.53461	1	2068	2068		49.466	4.4436	1	279480	+		6720	18351	4657	4663	7767	7767					0.07751071472080184
ELELKEELVAV	11	Unmodified	_ELELKEELVAV_					0	0	0			REV__nc|ENSG00000119397|Q7Z7A1-5|CNTRL	REV__nc|ENSG00000119397|Q7Z7A1-5|CNTRL	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	424.574621	1270.70203	-0.63518	-0.00026968	1.6601	0.00070486	1.025	0.00043517	424.57529905908024	30.968	0.66203	31.048	30.722	31.384	0.079834	0.045988	0.00055003	NaN	49.466	36	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	279480	+		6721	18351	4657	4663							0.07751071472080184
ELELLQEAQR	10	Unmodified	_ELELLQEAQR_					0	0	0		ENSG00000023892|ENST00000316637|DEF6	ENSG00000023892|ENST00000316637|DEF6	ENSG00000023892|ENST00000316637|DEF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	410.2244567871094	3	410.222582	1227.64592	-1.9325	-0.00079277	3.4171	0.0014018	1.4845	0.00060898	410.2239350295133	23.509	0.59683	23.562	23.412	24.009	0.05291					49	27	2	0	0	0	0.86802	1	767	767		27.047	0.98393	1	101820			6722	863	4658	4664	7768	7768					0.041198633552767205
ELELNPSI	8	Unmodified	_ELELNPSI_					0	0	0			REV__nc|ENSG00000156113|Q12791-5|KCNMA1	REV__nc|ENSG00000156113|Q12791-5|KCNMA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2641296386719	2	457.745108	913.475663	-1.1549	-0.00052866	-2.0816	-0.00095283	-3.2365	-0.0014815	457.74432517007466	82.89	3.1098	83.044	82.004	85.114	0.15473					132	72	2	0	0	0	0.4196	1	7920	7920		29.15	1.2673	1	108870	+		6723	20470	4659	4665	7769	7769					0.015463724236838061
ELELPLLKP	9	Unmodified	_ELELPLLKP_					0	0	0			REV__ENSG00000171759|ENST00000553106|PAH	REV__ENSG00000171759|ENST00000553106|PAH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3232421875	2	526.323525	1050.6325	-0.18304	-9.6338E-05	2.014	0.00106	1.8309	0.00096366	526.324520166758	61.08	1.3849	61.181	59.837	61.222	0.10082					92	55	2	0	0	0	0.78058	2	5197	5185;5197		30.504	4.9468	1	275350	+		6724	21764	4660	4666	7770;7771	7771					0.10920657313999982
ELELPLLKP	9	Unmodified	_ELELPLLKP_					0	0	0			REV__ENSG00000171759|ENST00000553106|PAH	REV__ENSG00000171759|ENST00000553106|PAH	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.7796630859375	2	526.323525	1050.6325	-0.1781	-9.3736E-05	2.75	0.0014474	2.5719	0.0013536	526.3249345133058	63.28	1.3226	63.394	62.356	63.679	0.11388					109	65	2	0	0	0	0.20789	1	5468	5468		27.882	0	1	136220	+		6725	21764	4660	4666	7772	7772					0.10920657313999982
ELELPLLKP	9	Unmodified	_ELELPLLKP_					0	0	0			REV__ENSG00000171759|ENST00000553106|PAH	REV__ENSG00000171759|ENST00000553106|PAH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3248291015625	2	526.323525	1050.6325	0.45815	0.00024113	1.8099	0.00095258	2.268	0.0011937	526.3243663512045	59.761	1.5451	59.877	59.01	60.555	0.1157					98	50	2	0	0	0	0.78058	1	5083	5083		30.504	0	1	175310	+		6726	21764	4660	4666	7773	7773					0.10920657313999982
ELELPPVL	8	Unmodified	_ELELPPVL_					0	0	0		ENST00000477935.1_1_7:92861780-92886786:+|nuORF	ENST00000477935.1_1_7:92861780-92886786:+|nuORF	ENST00000477935.1_1_7:92861780-92886786:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.2661437988281	2	455.268219	908.521884	-0.70894	-0.00032276	-3.6967	-0.001683	-4.4056	-0.0020057	455.26644591079787	38.513	1.1212	39.035	38.593	39.714	0.52235					55	26	3	0	0	0	0.884	1	3172	3172		33.516	3.0119	1	859060			6727	12368	4661	4667	7774	7774					0.06396437325747684
ELELPSSITA	10	Unmodified	_ELELPSSITA_					0	0	0			REV__ENSG00000196544|ENST00000389017|BORCS6	REV__ENSG00000196544|ENST00000389017|BORCS6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2753295898438	2	530.282054	1058.54956	-0.036804	-1.9517E-05	-0.12144	-6.4399E-05	-0.15825	-8.3916E-05	530.281834251677	77.801	1.07	78.369	78.055	79.125	0.56715					35	25	2	0	0	0	0.37624	1	8935	8935		37.812	4.9991	1	177700	+		6728	23142	4662	4668	7775	7775					0.02262295795344471
ELELPSSITA	10	Unmodified	_ELELPSSITA_					0	0	0			REV__ENSG00000196544|ENST00000389017|BORCS6	REV__ENSG00000196544|ENST00000389017|BORCS6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	530.282054	1058.54956	0.65584	0.00034778	-0.1376	-7.2964E-05	0.51825	0.00027482	530.2816908055378	77.905	1.0304	78.31	77.936	78.967	0.40531	-0.029217	-1.0244E-05	NaN	37.812	32	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	167310	+		6729	23142	4662	4668							0.02262295795344471
ELELSPKP	8	Unmodified	_ELELSPKP_					0	0	0			REV__ENSG00000145536|ENST00000274181|ADAMTS16	REV__ENSG00000145536|ENST00000274181|ADAMTS16	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30096435546875	2	456.755475	911.496398	-0.8643	-0.00039478	-2.1045	-0.00096123	-2.9688	-0.001356	456.7546556955693	35.681	0.63997	35.69	35.295	35.935	0.0092812					18	13	2	0	0	0	0.4196	1	2214	2214		21.96	3.6355	1	26095	+		6730	19951	4663	4669	7776	7776					0.03710962803336315
ELELTLPLV	9	Unmodified	_ELELTLPLV_					0	0	0			REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8090209960938	2	513.807708	1025.60086	-1.4174	-0.00072826	3.8525	0.0019794	2.4351	0.0012512	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.62081	1	3953	3953		45.952	15.448	1	1977600	+		6731	16702	4664	4670	7777	7777					0.08908664560044599
ELELTLPLV	9	Unmodified	_ELELTLPLV_					0	0	0			REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8086547851562	2	513.807708	1025.60086	0.034734	1.7846E-05	2.5238	0.0012968	2.5586	0.0013146	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.7932	1	4510	4510		23.042	4.7181	1	666950	+		6732	16702	4664	4670	7778	7778					0.08908664560044599
ELELTLPLV	9	Unmodified	_ELELTLPLV_					0	0	0			REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8079833984375	2	513.807708	1025.60086	-0.052006	-2.6721E-05	1.1706	0.00060144	1.1185	0.00057472	513.80813181887	66.806	0.42136	66.822	66.616	67.037	0.016197					32	19	2	0	0	0	0.78058	1	6283	6283		30.504	1.3541	1	91203	+		6733	16702	4664	4670	7779	7779					0.08908664560044599
ELELTLPLV	9	Unmodified	_ELELTLPLV_					0	0	0			REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8065795898438	2	513.807708	1025.60086	-0.43911	-0.00022562	2.8546	0.0014667	2.4155	0.0012411	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.78058	2	4370	4284;4370		30.504	5.8783	1	1606900	+		6734	16702	4664	4670	7780;7781	7781					0.08908664560044599
ELELTLPLV	9	Unmodified	_ELELTLPLV_					0	0	0			REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.80859375	2	513.807708	1025.60086	-0.38547	-0.00019806	3.0206	0.001552	2.6352	0.001354	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.7932	1	3884	3884		24.203	1.1603	1	1377600	+		6735	16702	4664	4670	7782	7782					0.08908664560044599
ELELTLPLV	9	Unmodified	_ELELTLPLV_					0	0	0			REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8088989257812	2	513.807708	1025.60086	-0.38169	-0.00019611	2.878	0.0014787	2.4963	0.0012826	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.78536	1	4201	4201		29.15	4.9468	1	926440	+		6736	16702	4664	4670	7783	7783					0.08908664560044599
ELELVRLVPL	10	Unmodified	_ELELVRLVPL_					0	0	0			REV__ENST00000591571.5_1_17:74722944-74729072:+|nuORF	REV__ENST00000591571.5_1_17:74722944-74729072:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8671264648438	2	590.868631	1179.72271	-0.23931	-0.0001414	-3.2253	-0.0019057	-3.4646	-0.0020471	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.46422	5	10624	10624;10651;10720;10730;10761		58.782	5.4305	1	39787000	+		6737	29198	4665	4671	7784;7785;7786;7787;7788	7784					0.14003706642415636
ELELVRLVPL	10	Unmodified	_ELELVRLVPL_					0	0	0			REV__ENST00000591571.5_1_17:74722944-74729072:+|nuORF	REV__ENST00000591571.5_1_17:74722944-74729072:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8666381835938	2	590.868631	1179.72271	-0.64254	-0.00037966	-3.2896	-0.0019437	-3.9321	-0.0023234	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.6116	5	11182	11110;11122;11170;11182;11322		49.442	8.6634	1	52912000	+		6738	29198	4665	4671	7789;7790;7791;7792;7793	7792					0.14003706642415636
ELELVRLVPL	10	Unmodified	_ELELVRLVPL_					0	0	0			REV__ENST00000591571.5_1_17:74722944-74729072:+|nuORF	REV__ENST00000591571.5_1_17:74722944-74729072:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.866943359375	2	590.868631	1179.72271	-0.76513	-0.00045209	-3.0712	-0.0018147	-3.8363	-0.0022667	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.71042	4	11238	11178;11238;11250;11372		44.117	6.3053	1	54208000	+		6739	29198	4665	4671	7794;7795;7796;7797	7795					0.14003706642415636
ELELVRLVPL	10	Unmodified	_ELELVRLVPL_					0	0	0			REV__ENST00000591571.5_1_17:74722944-74729072:+|nuORF	REV__ENST00000591571.5_1_17:74722944-74729072:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8667602539062	2	590.868631	1179.72271	-1.319	-0.00077937	-2.4341	-0.0014383	-3.7532	-0.0022176	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.46422	6	10932	10823;10896;10908;10932;10954;11112		58.782	9.3404	1	81379000	+		6740	29198	4665	4671	7798;7799;7800;7801;7802;7803	7801					0.14003706642415636
ELEMELQSVK	10	Unmodified	_ELEMELQSVK_					0	0	0			REV__ENSG00000128849|ENST00000281282|CGNL1	REV__ENSG00000128849|ENST00000281282|CGNL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.21221923828125	3	402.540923	1204.60094	2.7252	0.001097	-4.0281	-0.0016215	-1.3029	-0.00052447	402.5392027000222	29.809	1.0705	29.794	29.476	30.547	-0.015167					48	27	2	0	0	0	0.37624	1	1527	1527		12.433	0	1	96378	+		6741	18796	4666	4672	7804	7804					0.006822964977118318
ELEMQLLLAR	10	Unmodified	_ELEMQLLLAR_					0	0	0		ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78521728515625	3	405.897041	1214.66929	1.7602	0.00071446	-1.6774	-0.00068085	0.08279	3.3604E-05	406.23128234047306	34.103	0.27845	34.106	33.965	34.243	0.0026016					9	5	2	0	0	0	0.37624	1	2060	2060		15.333	0	1	16761			6742	4071	4667	4673	7805	7805					0.0705458586826353
ELEPGLNYY	9	Unmodified	_ELEPGLNYY_					0	0	0			REV__ENSG00000184344|ENST00000329913|GDF3	REV__ENSG00000184344|ENST00000329913|GDF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.2577514648438	2	549.261122	1096.50769	0.21664	0.00011899	-4.1223	-0.0022642	-3.9057	-0.0021453	549.2587347860896	33.876	0.53658	33.819	33.514	34.051	-0.056385					26	11	3	0	0	0	0.76764	1	2095	2095		34.173	6.2903	1	86785	+		6743	22664	4668	4674	7806	7806					-0.03670259893169714
ELEQIIVP	8	Unmodified	_ELEQIIVP_					0	0	0			REV__ENSG00000005108|ENST00000423059|THSD7A	REV__ENSG00000005108|ENST00000423059|THSD7A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7694091796875	2	470.771126	939.527698	-1.6002	-0.00075333	-2.9239	-0.0013765	-4.5241	-0.0021298	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.93786	1	4458	4458		53.351	3.3269	1	1490800	+		6744	16075	4669	4675	7807	7807					0.0555153583743504
ELEQIRLLL	9	Unmodified	_ELEQIRLLL_					0	0	0			REV__nc|ENSG00000187098|O75030-11|MITF;REV__nc|ENSG00000105967|O14948-4|TFEC	REV__nc|ENSG00000105967|O14948-4|TFEC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.8453979492188	2	563.845156	1125.67576	0.46678	0.00026319	-0.25074	-0.00014138	0.21604	0.00012181	563.8448455446281	72.396	1.109	72.946	72.565	73.674	0.55008					68	26	4	0	0	0	0.26953	1	8145	8145		67.494	5.8024	1	2900000	+		6745	22903;17586	4670	4676	7808	7808					0.11794847091277916
ELERKLTF	8	Unmodified	_ELERKLTF_					0	0	0		nc|ENSG00000260916|Q9ULG6-4|CCPG1;nc|ENSG00000260916|Q9ULG6-2|CCPG1;ENST00000568372.5_1_15:55651699-55664264:-|nuORF;nc|ENSG00000260916|Q9ULG6|CCPG1;ENSG00000260916|ENST00000442196|CCPG1	nc|ENSG00000260916|Q9ULG6-4|CCPG1	nc|ENSG00000260916|Q9ULG6-4|CCPG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.282958984375	2	518.295299	1034.57605	0.22936	0.00011888	0.19303	0.00010005	0.42239	0.00021892	518.2955773574215	55.433	0.16767	56.001	55.866	56.033	0.56836					5	3	2	0	0	0	0.4196	1	5690	5690		25.45	0	1	55053			6746	8921	4671	4677	7809	7809					0.06014029477319127
ELERKLTF	8	Unmodified	_ELERKLTF_					0	0	0		nc|ENSG00000260916|Q9ULG6-4|CCPG1;nc|ENSG00000260916|Q9ULG6-2|CCPG1;ENST00000568372.5_1_15:55651699-55664264:-|nuORF;nc|ENSG00000260916|Q9ULG6|CCPG1;ENSG00000260916|ENST00000442196|CCPG1	nc|ENSG00000260916|Q9ULG6-4|CCPG1	nc|ENSG00000260916|Q9ULG6-4|CCPG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	518.295299	1034.57605	-0.00779	-4.0375E-06	-0.55909	-0.00028978	-0.56688	-0.00029381	518.2949751570995	55.838	0.51439	55.828	55.538	56.053	-0.010136	-0.06416	-0.00013925	NaN	25.45	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153730			6747	8921	4671	4677							0.06014029477319127
ELERKLTF	8	Unmodified	_ELERKLTF_					0	0	0		nc|ENSG00000260916|Q9ULG6-4|CCPG1;nc|ENSG00000260916|Q9ULG6-2|CCPG1;ENST00000568372.5_1_15:55651699-55664264:-|nuORF;nc|ENSG00000260916|Q9ULG6|CCPG1;ENSG00000260916|ENST00000442196|CCPG1	nc|ENSG00000260916|Q9ULG6-4|CCPG1	nc|ENSG00000260916|Q9ULG6-4|CCPG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	518.295299	1034.57605	-0.25232	-0.00013078	-0.36436	-0.00018885	-0.61668	-0.00031962	518.2949847260544	55.816	0.52152	55.847	55.509	56.031	0.030838	-0.045178	6.2611E-05	NaN	25.45	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	227520			6748	8921	4671	4677							0.06014029477319127
ELERLRLNRNH	11	Unmodified	_ELERLRLNRNH_					0	0	0		nc|ENSG00000145147|O94813-3|SLIT2;nc|ENSG00000145147|O94813-2|SLIT2;ENSG00000145147|ENST00000504154|SLIT2	nc|ENSG00000145147|O94813-3|SLIT2	nc|ENSG00000145147|O94813-3|SLIT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.9361572265625	3	483.939291	1448.79604	-2.3425	-0.0011336	-3.9106	-0.0018925	-6.2532	-0.0030262	483.9373455277064	43.019	1.1728	43.02	42.643	43.816	0.00017166					80	27	4	0	0	0	0.74771	1	3278	3278		22.562	3.5953	1	1767600			6749	4749	4672	4678	7810	7810					0.08959648137624754
ELESGHEIL	9	Unmodified	_ELESGHEIL_					0	0	0		ENST00000502900.2_1_X:148688442-148693021:-|nuORF	ENST00000502900.2_1_X:148688442-148693021:-|nuORF	ENST00000502900.2_1_X:148688442-148693021:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.758056640625	2	513.758746	1025.50294	-1.009	-0.00051839	0.053579	2.7526E-05	-0.95544	-0.00049086	513.7586405840968	42.845	0.70354	43.279	43.006	43.71	0.4334					31	16	3	0	0	0	0.15928	1	3839	3839		82.305	8.3303	1	942810			6750	12868	4673	4679	7811	7811					-0.00879144035934587
ELESVLRR	8	Unmodified	_ELESVLRR_					0	0	0			REV__ENSG00000253368|ENST00000522111|TRNP1	REV__ENSG00000253368|ENST00000522111|TRNP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2903747558594	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.89043	1	10523	10523		35.618	0	1	9038000	+		6751	23878	4674	4680	7812	7812					0.06628261191815454
ELEVLSPLL	9	Unmodified	_ELEVLSPLL_					0	0	0			REV__ENSG00000175262|ENST00000377004|C1orf127	REV__ENSG00000175262|ENST00000377004|C1orf127	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3076477050781	2	506.799883	1011.58521	-0.19133	-9.6968E-05	2.5385	0.0012865	2.3472	0.0011895	506.80123895899897	48.621	1.8046	48.528	47.706	49.51	-0.093178					58	44	2	0	0	0	0.20789	1	3720	3720		30.504	0	1	197490	+		6752	22053	4675	4681	7813	7813					0.07988378043023658
ELEVPSYEI	9	Unmodified	_ELEVPSYEI_					0	0	0			REV__ENSG00000244588|ENST00000683101|RAD21L1	REV__ENSG00000244588|ENST00000683101|RAD21L1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.7689208984375	2	539.76878	1077.52301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.736	1	78.141	77.641	78.641	0.40531								0	0	0	0.33559	1	8854	8854		45.952	1.8352	1		+		6753	23852	4676	4682	7814	7814					-0.01265393095991385
ELFDLFRYFVH	11	Unmodified	_ELFDLFRYFVH_					0	0	0		ENST00000525696.5_1_14:24683507-24684828:-|nuORF;ENST00000532557.5_1_14:24683254-24684828:-|nuORF;nc|ENSG00000213920|Q86V88-2|MDP1;ENST00000528804.1_1_14:24683633-24685170:-|nuORF;ENSG00000213920|ENST00000288087|MDP1	ENST00000525696.5_1_14:24683507-24684828:-|nuORF	ENST00000525696.5_1_14:24683507-24684828:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	495.92462158203125	3	495.922355	1484.74524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.495	1	38.506	38.006	39.006	0.010708								0	0	0	0.56276	1	2284	2284		18.531	0	1				6754	8607	4677	4683	7815	7815					0.022253060400316826
ELFDRGEFSAA	11	Unmodified	_ELFDRGEFSAA_					0	0	0		ENST00000381161.5_1_X:2748138-2799251:+|nuORF;nc|ENSG00000056998|O15488-5|GYG2;nc|ENSG00000056998|O15488-4|GYG2;nc|ENSG00000056998|O15488-3|GYG2;nc|ENSG00000056998|O15488-6|GYG2;ENSG00000056998|ENST00000398806|GYG2;nc|ENSG00000056998|O15488|GYG2	ENST00000381161.5_1_X:2748138-2799251:+|nuORF	ENST00000381161.5_1_X:2748138-2799251:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.2869262695312	2	621.293485	1240.57242	0.5351	0.00033245	-3.209	-0.0019938	-2.6739	-0.0016613	621.291170887534	23.318	0.63416	23.379	23.24	23.874	0.060431					31	23	2	0	0	0	0.70737	1	786	786		30.318	1.1682	1	24786			6755	10944	4678	4684	7816	7816					-0.0382468508717011
ELFDRIIDE	9	Unmodified	_ELFDRIIDE_					0	0	0		nc|ENSG00000145949|Q86YV6-2|MYLK4;ENSG00000145949|ENST00000274643|MYLK4	nc|ENSG00000145949|Q86YV6-2|MYLK4	nc|ENSG00000145949|Q86YV6-2|MYLK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.29443359375	2	575.292953	1148.57135	-0.40049	-0.0002304	-0.96308	-0.00055405	-1.3636	-0.00078445	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.38563	1	8733	8733		58.782	2.0609	1	1396200			6756	4806	4679	4685	7817	7817					0.003011005439248038
ELFHMYRY	8	Unmodified	_ELFHMYRY_					0	0	0			REV__ENSG00000257093|ENST00000536163|DENND11	REV__ENSG00000257093|ENST00000536163|DENND11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.301513671875	2	579.773677	1157.5328	-0.89999	-0.00052179	4.0037	0.0023212	3.1037	0.0017994	580.2775594943569	49.896	0.49473	50.344	50.02	50.515	0.44761					16	11	2	0	0	0	0.4196	1	4855	4855		30.504	0	1	161150	+		6757	23916	4680	4686	7818	7818					-0.03966483571593926
ELFIKVDLL	9	Unmodified	_ELFIKVDLL_					0	0	0			REV__ENSG00000186393|ENST00000335552|KRT26	REV__ENSG00000186393|ENST00000335552|KRT26	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3168334960938	2	545.33135	1088.64815	2.197	0.0011981	3.797	0.0020706	5.994	0.0032687	545.3334710464867	90.431	0.83694	90.361	89.961	90.798	-0.069977					30	19	3	0	0	0	0.20789	1	9430	9430		34.173	5.023	1	137960	+	+	6758	16025	4681	4687	7819	7819					0.10736943831057033
ELFIKVDLL	9	Unmodified	_ELFIKVDLL_					0	0	0			REV__ENSG00000186393|ENST00000335552|KRT26	REV__ENSG00000186393|ENST00000335552|KRT26	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3165283203125	2	545.33135	1088.64815	0.15284	8.335E-05	2.1097	0.0011505	2.2626	0.0012339	545.3333111425922	89.934	0.43256	90.147	89.779	90.211	0.21271					14	9	2	0	0	0	0.20789	1	8962	8962		24.519	0	1	150990	+	+	6759	16025	4681	4687	7820	7820					0.10736943831057033
ELFIVKLKSG	10	Unmodified	_ELFIVKLKSG_					0	0	0			REV__ENSG00000100504|ENST00000216392|PYGL	REV__ENSG00000100504|ENST00000216392|PYGL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3294677734375	2	567.350074	1132.6856	1.5004	0.00085124	-2.7896	-0.0015827	-1.2893	-0.00073146	568.347433988142	93.092	0.48605	93.137	92.878	93.364	0.045448					19	11	3	0	0	0	0.37624	1	9720	9720		30.318	4.7437	1	89421	+		6760	17199	4682	4688	7821	7821					0.12456035096647611
ELFLAKKEK	9	Unmodified	_ELFLAKKEK_					0	0	0			REV__ENSG00000148488|ENST00000377602|ST8SIA6	REV__ENSG00000148488|ENST00000377602|ST8SIA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.3322143554688	2	553.334424	1104.6543	0.81959	0.00045351	-4.4582	-0.0024669	-3.6386	-0.0020134	553.3317918445606	96.793	1.7474	96.956	96.403	98.15	0.16317					118	40	4	0	0	0	0.7932	1	10037	10037		19.104	0.84144	1	2701500	+		6761	20119	4683	4689	7822	7822					0.10615462062560255
ELFLIIGFTVI	11	Unmodified	_ELFLIIGFTVI_					0	0	0		ENST00000486155.1_1_6:35928714-35992326:-|nuORF;nc|ENSG00000112053|Q96RN1-4|SLC26A8;ENSG00000112053|ENST00000490799|SLC26A8	ENST00000486155.1_1_6:35928714-35992326:-|nuORF	ENST00000486155.1_1_6:35928714-35992326:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.581787109375	3	422.256564	1263.74786	-0.18563	-7.8385E-05	2.9332	0.0012386	2.7476	0.0011602	422.2576586891361	98.367	0.22046	98.424	98.314	98.534	0.056831					7	4	2	0	0	0	0.17375	1	10411	10411		24.232	7.0651	1	20866			6762	2630	4684	4690	7823	7823					0.12653761444994416
ELFLKAVEEE	10	Unmodified	_ELFLKAVEEE_					0	0	0		nc|ENSG00000112146|Q9UK97-3|FBXO9;ENSG00000112146|ENST00000323557|FBXO9;nc|ENSG00000112146|Q9UK97|FBXO9	nc|ENSG00000112146|Q9UK97-3|FBXO9	nc|ENSG00000112146|Q9UK97-3|FBXO9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3186645507812	2	603.816261	1205.61797	-0.49611	-0.00029956	0.40386	0.00024386	-0.092249	-5.5701E-05	603.8164525981151	65.243	0.35632	65.248	65.1	65.456	0.0046997					21	13	2	0	0	0	0.57924	1	6148	6148		51.193	7.0759	1	133690			6763	2635	4685	4691	7824	7824					0.023385403751944978
ELFLTILLN	9	Unmodified	_ELFLTILLN_					0	0	0		nc|ENSG00000138653|Q9H3R1-2|NDST4;ENSG00000138653|ENST00000264363|NDST4	nc|ENSG00000138653|Q9H3R1-2|NDST4	nc|ENSG00000138653|Q9H3R1-2|NDST4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3274536132812	2	538.323525	1074.6325	3.4335	0.0018483	2.8142	0.001515	6.2477	0.0033633	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.64922	1	11290	11290		44.117	13.613	1	75550000			6764	4313	4686	4692	7825	7825					0.09816657314013355
ELFLVITGEI	10	Unmodified	_ELFLVITGEI_					0	0	0			REV__nc|ENSG00000148120|Q8N6M6-3|AOPEP	REV__nc|ENSG00000148120|Q8N6M6-3|AOPEP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3297729492188	2	567.326265	1132.63798	1.8589	0.0010546	4.3547	0.0024705	6.2136	0.0035251	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.8608	1	9970	9970		34.173	11.13	1	15439000	+		6765	20096	4687	4693	7826	7826					0.07696336105800583
ELFQQLLNNR	10	Unmodified	_ELFQQLLNNR_					0	0	0			REV__ENSG00000105509|ENST00000540069|HAS1	REV__ENSG00000105509|ENST00000540069|HAS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	638.3397216796875	2	637.846219	1273.67788	0.40796	0.00026022	-1.5045	-0.00095964	-1.0965	-0.00069943	637.8451725799487	43.684	1.2213	43.633	43.352	44.573	-0.051186					65	29	3	0	0	0	0.77314	1	3080	3080		40.778	1.5253	1	2487300	+		6766	17546	4688	4694	7827	7827					0.05199275829090766
ELFRIKVN	8	Unmodified	_ELFRIKVN_					0	0	0			REV__ENSG00000109684|ENST00000226951|CLNK	REV__ENSG00000109684|ENST00000226951|CLNK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8035888671875	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.87064	1	8523	8523		29.15	3.6994	1	2989000	+		6767	17767	4689	4695	7828	7828					0.08902039576855714
ELFRVEEDL	9	Unmodified	_ELFRVEEDL_					0	0	0		ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2955932617188	2	575.292953	1148.57135	-0.40049	-0.0002304	-0.96308	-0.00055405	-1.3636	-0.00078445	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.75725	1	8584	8584		36.447	0.82846	1	1396200			6768	3049	4690	4696	7829	7829					0.003011005439248038
ELFRVKLN	8	Unmodified	_ELFRVKLN_					0	0	0			REV__ENSG00000167306|ENST00000285039|MYO5B	REV__ENSG00000167306|ENST00000285039|MYO5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8039855957031	2	509.805834	1017.59712	0.075306	3.8391E-05	-4.2119	-0.0021473	-4.1366	-0.0021089	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.87479	1	8629	8629		30.504	2.2494	1	958280	+		6769	21375	4691	4697	7830	7830					0.08902039576855714
ELFTKKNIN	9	Unmodified	_ELFTKKNIN_					0	0	0		ENST00000479458.1_1_1:24140678-24143239:-|nuORF;ENST00000513148.1_1_1:24137168-24151905:-|nuORF;ENSG00000117305|ENST00000374490|HMGCL	ENST00000479458.1_1_1:24140678-24143239:-|nuORF	ENST00000479458.1_1_1:24140678-24143239:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8136596679688	2	553.813856	1105.61316	-0.54899	-0.00030404	0.73651	0.00040789	0.18752	0.00010385	553.8141037249087	27.065	0.75811	26.889	26.523	27.281	-0.17559					35	16	3	0	0	0	0.6204	1	1555	1555		45.972	0	1	438870			6770	2969	4692	4698	7831	7831					0.06457701023100526
ELGALLAVL	9	Unmodified	_ELGALLAVL_					0	0	0		ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.27081298828125	2	449.784036	897.553519	-0.97041	-0.00043648	-1.8563	-0.00083494	-2.8267	-0.0012714	449.78314242581075	102.5	0.74181	102.5	102.21	102.96	0					29	18	2	0	0	0	0.20789	1	10482	10482		24.203	6.8378	1	88565			6771	1196	4693	4699	7832	7832					0.10064430079705744
ELGALLAVL	9	Unmodified	_ELGALLAVL_					0	0	0		ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	449.784036	897.553519	-0.1415	-6.3646E-05	-3.1566	-0.0014198	-3.2981	-0.0014834	449.78262636271506	102.38	0.72555	102.4	102.12	102.85	0.01989	0.057679	-0.00065909	NaN	17.365	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103760			6772	1196	4693	4699							0.10064430079705744
ELGALLAVL	9	Unmodified	_ELGALLAVL_					0	0	0		ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	449.784036	897.553519	2.7523	0.0012379	-5.8049	-0.002611	-3.0526	-0.001373	449.7811322502874	102.33	0.64671	102.28	102.06	102.7	-0.046997	-0.062525	-0.0030414	NaN	17.365	25	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78165			6773	1196	4693	4699							0.10064430079705744
ELGALLAVL	9	Unmodified	_ELGALLAVL_					0	0	0		ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	449.784036	897.553519	-1.7777	-0.00079959	-1.2534	-0.00056377	-3.0311	-0.0013634	449.7834424521255	102.21	1.0135	102.35	101.89	102.9	0.1357	0.0019503	0.001053	NaN	17.365	37	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173940			6774	1196	4693	4699							0.10064430079705744
ELGAPLRLALW	11	Unmodified	_ELGAPLRLALW_					0	0	0			REV__ENST00000278550.11_1_11:78482086-78482179:-|nuORF	REV__ENST00000278550.11_1_11:78482086-78482179:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8692016601562	2	619.866423	1237.71829	1.2649	0.00078404	3.424	0.0021224	4.6888	0.0029065	619.86841143733	93.879	2.9041	94.108	92.241	95.145	0.22863					217	69	4	0	0	0	0.64498	1	9600	9600		39.253	5.0803	1	2572300	+		6775	24595	4694	4700	7833	7833					0.10894242219501393
ELGARPGVR	9	Unmodified	_ELGARPGVR_					0	0	0			REV__ENST00000219204.7_1_16:57279230-57280003:+|nuORF	REV__ENST00000219204.7_1_16:57279230-57280003:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7776794433594	2	477.777608	953.540663	-0.73139	-0.00034944	0.31816	0.00015201	-0.41323	-0.00019743	477.7777174120448	30.208	0.69886	30.118	29.875	30.573	-0.089544					29	15	4	0	0	0	0.71772	1	1985	1985		39.253	5.0803	1	370930	+		6776	24145	4695	4701	7834	7834					0.06203411740193587
ELGDPFII	8	Unmodified	_ELGDPFII_					0	0	0		nc|ENSG00000120526|Q96RS6-3|NUDCD1;ENST00000519607.5_1_8:110255240-110326067:-|nuORF;nc|ENSG00000120526|Q96RS6-2|NUDCD1;ENSG00000120526|ENST00000239690|NUDCD1	nc|ENSG00000120526|Q96RS6-3|NUDCD1	nc|ENSG00000120526|Q96RS6-3|NUDCD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9439392089844	2	452.244744	902.474934	-1.2923	-0.00058442	-3.4953	-0.0015807	-4.7875	-0.0021651	452.24308131649633	53.866	0.5835	53.914	53.601	54.184	0.047802					26	15	2	0	0	0	0.4196	1	4388	4388		44.531	5.7249	1	149420			6777	3135	4696	4702	7835	7835					0.019795777746367094
ELGFGIRRIR	10	Unmodified	_ELGFGIRRIR_					0	0	0			REV__nc|ENSG00000038295|O43897-2|TLL1	REV__nc|ENSG00000038295|O43897-2|TLL1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.248779296875	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.27	1	117.25	116.75	117.75	-0.02433								0	0	0	0.45132	1	12986	12986		25.126	3.3456	1		+		6778	16302	4697	4703	7836	7836					0.12079296028127828
ELGFKGRIV	9	Unmodified	_ELGFKGRIV_					0	0	0			REV__ENST00000559016.1_1_15:49426483-49429634:-|nuORF	REV__ENST00000559016.1_1_15:49426483-49429634:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8046569824219	2	509.805834	1017.59712	-0.71562	-0.00036483	-2.7409	-0.0013973	-3.4566	-0.0017622	509.8042530749235	99.723	0.85551	99.723	99.348	100.2	0					47	20	3	0	0	0	0.76255	1	10117	10117		35.618	5.7767	1	277710	+		6779	28745	4698	4704	7837	7837					0.08902039576855714
ELGHLSMLL	9	Unmodified	_ELGHLSMLL_					0	0	0		nc|ENSG00000160193|P57081-2|WDR4;ENSG00000160193|ENST00000398208|WDR4	nc|ENSG00000160193|P57081-2|WDR4	nc|ENSG00000160193|P57081-2|WDR4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.37896728515625	2	506.778428	1011.5423	0.12027	6.0952E-05	-3.4995	-0.0017735	-3.3792	-0.0017125	506.77659854647544	69.08	0.58487	69.464	69.224	69.808	0.38416					23	13	2	0	0	0	0.20789	1	7623	7623		24.203	0	1	118970			6780	5562	4699	4705	7838	7838					0.036992847139231344
ELGKKKKQILH	11	Unmodified	_ELGKKKKQILH_					0	0	0		ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1	ENSG00000198554|ENST00000360586|WDHD1	ENSG00000198554|ENST00000360586|WDHD1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.2823486328125	3	441.281995	1320.82415	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.702	1	40.784	40.284	41.284	0.081345								0	0	0	0.56276	1	2605	2605		14.086	4.4399	1				6781	8286	4700	4706	7839	7839					0.17657578064995505
ELGKKRLS	8	Unmodified	_ELGKKRLS_					0	0	0			REV__ENSG00000066777|ENST00000262215|ARFGEF1	REV__ENSG00000066777|ENST00000262215|ARFGEF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.2740478515625	2	465.790184	929.565815	-0.1002	-4.6672E-05	0.045515	2.1201E-05	-0.054685	-2.5472E-05	465.79006265712155	18.899	0.33667	18.27	18.107	18.444	-0.6296					13	7	2	0	0	0	0.4196	1	444	444		29.15	0	1	68087	+		6782	16529	4701	4707	7840	7840					0.09821466542746293
ELGKLTSK	8	Unmodified	_ELGKLTSK_					0	0	0			REV__ENSG00000104375|ENST00000419617|STK3	REV__ENSG00000104375|ENST00000419617|STK3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2678527832031	2	438.263468	874.512382	1.1331	0.0004966	-2.1063	-0.00092313	-0.97322	-0.00042653	438.2616881649259	51.267	0.39437	51.275	51.043	51.437	0.0077438					10	8	2	0	0	0	0.4196	1	4431	4431		24.519	4.5224	1	22503	+		6783	17454	4702	4708	7841	7841					0.07010669040221273
ELGKLTSK	8	Unmodified	_ELGKLTSK_					0	0	0			REV__ENSG00000104375|ENST00000419617|STK3	REV__ENSG00000104375|ENST00000419617|STK3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26800537109375	2	438.263468	874.512382	0.98092	0.0004299	-0.87222	-0.00038226	0.1087	4.7638E-05	438.26310071329544	51.285	0.70061	52.037	51.696	52.397	0.75174					28	16	3	0	0	0	0.4196	1	5111	5111		19.997	0	1	234070	+		6784	17454	4702	4708	7842	7842					0.07010669040221273
ELGLLVLLPI	10	Unmodified	_ELGLLVLLPI_					0	0	0			REV__ENST00000477401.5_1_7:14660999-14880939:-|nuORF	REV__ENST00000477401.5_1_7:14660999-14880939:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.35888671875	2	540.357368	1078.70018	-0.09847	-5.3209E-05	2.5238	0.0013637	2.4253	0.0013105	540.3585531343375	36.951	1.7168	36.927	36.371	38.088	-0.023979					87	38	3	0	0	0	0.8488	1	2424	2424		17.365	5.1581	1	433100	+		6785	15903	4703	4709	7843	7843					0.16398107244822313
ELGLPELLG	9	Unmodified	_ELGLPELLG_					0	0	0			REV__ENSG00000117115|ENST00000375486|PADI2	REV__ENSG00000117115|ENST00000375486|PADI2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7691650390625	2	470.771126	939.527698	-0.63239	-0.00029771	-3.9276	-0.001849	-4.56	-0.0021467	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.58151	1	4816	4816		47.916	5.5195	1	1468500	+		6786	18245	4704	4710	7844	7844					0.0555153583743504
ELGLPELLG	9	Unmodified	_ELGLPELLG_					0	0	0			REV__ENSG00000117115|ENST00000375486|PADI2	REV__ENSG00000117115|ENST00000375486|PADI2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.76873779296875	2	470.771126	939.527698	-0.93673	-0.00044098	-3.6155	-0.0017021	-4.5522	-0.0021431	470.7692759714824	53.261	1.827	53.278	52.753	54.58	0.017487					126	54	3	0	0	0	0.62081	1	4784	4784		45.952	5.3793	1	1396300	+		6787	18245	4704	4710	7845	7845					0.0555153583743504
ELGLSYII	8	Unmodified	_ELGLSYII_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.2587890625	2	454.260394	906.506234	-0.7618	-0.00034606	-3.8412	-0.0017449	-4.603	-0.002091	454.25854230174724	49.698	1.6695	50.158	49.025	50.695	0.45983					52	40	2	0	0	0	0.89457	1	4857	4857		37.028	7.1869	1	549300	+		6788	19946	4705	4711	7846	7846					0.04924150808710692
ELGLSYII	8	Unmodified	_ELGLSYII_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	454.260394	906.506234	0.29938	0.000136	-4.2716	-0.0019404	-3.9723	-0.0018044	454.2603937862972	49.9	0.10884	49.943	49.855	49.964	0.042236	-0.22923	0.00032805	NaN	37.028	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20926	+		6789	19946	4705	4711							0.04924150808710692
ELGLSYII	8	Unmodified	_ELGLSYII_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	454.260394	906.506234	-0.7618	-0.00034606	-3.8412	-0.0017449	-4.603	-0.002091	454.25854230174724	49.698	1.6695	50.158	49.025	50.695	0.45983	-0.014295	0.00071913	NaN	37.028	52	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	549300	+		6790	19946	4705	4711							0.04924150808710692
ELGLSYII	8	Unmodified	_ELGLSYII_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	454.260394	906.506234	0.53892	0.00024481	-5.2187	-0.0023706	-4.6797	-0.0021258	454.257948365557	49.57	1.5411	50.415	49.31	50.851	0.84501	0.24353	-0.00053234	NaN	37.028	53	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	781510	+		6791	19946	4705	4711							0.04924150808710692
ELGPLQLL	8	Unmodified	_ELGPLQLL_					0	0	0			REV__ENST00000586859.1_1_17:74039843-74041464:-|nuORF	REV__ENST00000586859.1_1_17:74039843-74041464:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.2684020996094	2	441.768386	881.522219	-0.018286	-8.0781E-06	-3.7602	-0.0016611	-3.7785	-0.0016692	441.7652330177748	61.532	0.66989	62.086	61.802	62.472	0.55387					22	15	2	0	0	0	0.4196	1	6571	6571		42.474	18.272	1	114720	+		6792	21434	4706	4712	7847	7847					0.07671857045625075
ELGPPVMLDA	10	Unmodified	_ELGPPVMLDA_					0	0	0		nc|ENSG00000288640|O00458-2|IFRD1;ENSG00000006652|ENST00000403825|IFRD1;ENST00000489994.5_1_7:112107978-112115571:+|nuORF	nc|ENSG00000288640|O00458-2|IFRD1	nc|ENSG00000288640|O00458-2|IFRD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	521.9911499023438	2	521.267893	1040.52123	-0.39306	-0.00020489	0.23102	0.00012042	-0.16204	-8.4465E-05	521.2679541001529	55.521	0.42912	55.485	55.336	55.765	-0.036827					22	13	2	0	0	0	0.37624	1	4661	4661		34.173	13.226	1	98138			6793	707	4707	4713	7848	7848					0.002592746144046032
ELGPVWRDWR	10	Unmodified	_ELGPVWRDWR_					0	0	0			REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2574768066406	3	438.563161	1312.66765	0.58793	0.00025785	-4.385	-0.0019231	-3.7971	-0.0016653	438.561284727797	29.863	0.38553	29.774	29.532	29.917	-0.089544					13	8	2	0	0	0	0.37624	1	1939	1939		25.126	9.7929	1	79803	+		6794	28852	4708	4714	7849	7849					0.02382712894495853
ELGRPNRLTLL	11	Unmodified	_ELGRPNRLTLL_					0	0	0			REV__ENST00000596217.1_2_19:50431895-50432066:-|nuORF	REV__ENST00000596217.1_2_19:50431895-50432066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.3846435546875	2	641.385511	1280.75647	-1.1549	-0.00074073	-0.56975	-0.00036543	-1.7246	-0.0011062	641.3847498029768	102.62	1.032	102.75	102.41	103.44	0.13569					59	25	4	0	0	0	0.7144	1	10742	10742		29.17	3.1067	1	1426400	+		6795	29255	4709	4715	7850	7850					0.12732128134166487
ELGSLKRKAAA	11	Unmodified	_ELGSLKRKAAA_					0	0	0			REV__nc|ENSG00000133316|Q6RFH5-2|WDR74	REV__nc|ENSG00000133316|Q6RFH5-2|WDR74	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.84326171875	2	572.345855	1142.67716	0.49037	0.00028066	0.34517	0.00019756	0.83554	0.00047822	572.3513413269559	17.065	0.26148	16.455	16.305	16.567	-0.6107					15	5	4	0	0	0	0.74763	1	216	216		22.58	4.3176	1	72640	+		6796	19073	4710	4716	7851	7851					0.11152481180056384
ELGTAELGL	9	Unmodified	_ELGTAELGL_					0	0	0			REV__ENST00000460297.1_1_16:448229-448523:+|nuORF	REV__ENST00000460297.1_1_16:448229-448523:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7458801269531	2	451.745108	901.475663	-0.42544	-0.00019219	0.58191	0.00026287	0.15647	7.0685E-05	451.7452985454062	33.515	0.67748	33.459	33.146	33.823	-0.056385					47	15	4	0	0	0	0.62081	1	2081	2081		45.952	7.1458	1	315680	+		6797	27000	4711	4717	7852	7852					0.02098372423665751
ELGVRGRN	8	Unmodified	_ELGVRGRN_					0	0	0		ENST00000216500.9_1_14:60631944-60632160:-|nuORF	ENST00000216500.9_1_14:60631944-60632160:-|nuORF	ENST00000216500.9_1_14:60631944-60632160:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7546691894531	2	450.754133	899.493713	-1.5537	-0.00070033	1.6807	0.0007576	0.12705	5.7268E-05	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.884	1	7655	7655		33.516	0	1	298090			6798	9144	4712	4718	7853	7853					0.03994552189044498
ELHFSMTLN	9	Oxidation (M)	_ELHFSM(Oxidation (M))TLN_		ELHFSM(1)TLN		ELHFSM(64)TLN	0	0	1			REV__nc|ENSG00000177455|P15391-2|CD19	REV__nc|ENSG00000177455|P15391-2|CD19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.26025390625	2	554.260599	1106.50665	-0.20418	-0.00011317	-2.7491	-0.0015237	-2.9532	-0.0016369	554.2589451632552	71.042	2.142	71.59	71.166	73.308	0.54756					123	51	4	0	0	0	0.30689	1	7978	7978		64.207	9.431	1	2743300	+		6799	22203	4713	4719	7854	7854		334			-0.04234797533717938
ELHKMKPVLI	10	Unmodified	_ELHKMKPVLI_					0	0	0			REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3655395507812	2	604.365201	1206.71585	-0.16845	-0.00010181	3.1303	0.0018918	2.9618	0.00179	604.3669303033663	107.81	0.85171	107.81	107.02	107.87	0					52	20	4	0	0	0	0.86218	1	11212	11212		32.812	1.2826	1	11686000	+		6800	27824	4714	4720	7855	7855					0.12076070490206803
ELHKMKPVLI	10	Unmodified	_ELHKMKPVLI_					0	0	0			REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.366455078125	2	604.365201	1206.71585	3.2045	0.0019367	-1.1571	-0.00069932	2.0474	0.0012374	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.86218	2	11463	11463;11916		32.812	0	1	63446000	+		6801	27824	4714	4720	7856;7857	7856					0.12076070490206803
ELHKMKPVLI	10	Unmodified	_ELHKMKPVLI_					0	0	0			REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3661499023438	2	604.365201	1206.71585	-0.12334	-7.4541E-05	2.4192	0.0014621	2.2959	0.0013875	604.3664641900143	107.88	0.45378	107.91	107.52	107.97	0.035622					25	10	3	0	0	0	0.86718	1	11816	11816		27.882	3.3631	1	10672000	+		6802	27824	4714	4720	7858	7858					0.12076070490206803
ELHKMKPVLI	10	Unmodified	_ELHKMKPVLI_					0	0	0			REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3662719726562	2	604.365201	1206.71585	0.90473	0.00054679	1.1233	0.00067889	2.028	0.0012257	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.85934	1	11437	11437		35.618	2.8059	1	105740000	+		6803	27824	4714	4720	7859	7859					0.12076070490206803
ELHKMKPVLI	10	Unmodified	_ELHKMKPVLI_					0	0	0			REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3663940429688	2	604.365201	1206.71585	-1.2751	-0.0007706	3.3813	0.0020435	2.1062	0.0012729	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.77314	1	11252	11252		40.778	4.3314	1	103250000	+		6804	27824	4714	4720	7860	7860					0.12076070490206803
ELHKMKPVLI	10	Unmodified	_ELHKMKPVLI_					0	0	0			REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.365478515625	2	604.365201	1206.71585	-1.2751	-0.00077064	4.1148	0.0024869	2.8397	0.0017162	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85251	2	12663	12328;12663		27.882	4.3595	1	3346600	+		6805	27824	4714	4720	7861;7862	7862					0.12076070490206803
ELHKMKPVLI	10	Unmodified	_ELHKMKPVLI_					0	0	0			REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3663330078125	2	604.365201	1206.71585	2.3603	0.0014265	0.029722	1.7963E-05	2.39	0.0014444	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.86589	1	12823	12823		29.15	0	1	5984800	+		6806	27824	4714	4720	7863	7863					0.12076070490206803
ELHLGLVGA	9	Unmodified	_ELHLGLVGA_					0	0	0			REV__ENST00000565963.5_1_16:2571022-2578042:+|nuORF	REV__ENST00000565963.5_1_16:2571022-2578042:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.7690124511719	2	454.763635	907.512717	0.013438	6.1112E-06	0.6122	0.00027841	0.62564	0.00028452	454.7636443237422	49.658	0.75392	49.655	49.313	50.067	-0.0030365					30	17	2	0	0	0	0.20789	1	4121	4121		38.806	13.356	1	60293	+		6807	20793	4715	4721	7864	7864					0.05526088760097991
ELHLGLVGA	9	Unmodified	_ELHLGLVGA_					0	0	0			REV__ENST00000565963.5_1_16:2571022-2578042:+|nuORF	REV__ENST00000565963.5_1_16:2571022-2578042:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	454.763635	907.512717	0.17594	8.001E-05	0.41587	0.00018912	0.59181	0.00026913	454.76354201176895	49.709	0.6653	49.713	49.411	50.077	0.0035973	0.10778	-0.00022474	NaN	38.806	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73663	+		6808	20793	4715	4721							0.05526088760097991
ELHMVVIFF	9	Unmodified	_ELHMVVIFF_					0	0	0		ENST00000337273.9_1_5:72208420-72208516:+|nuORF	ENST00000337273.9_1_5:72208420-72208516:+|nuORF	ENST00000337273.9_1_5:72208420-72208516:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.144775390625	2	567.804445	1133.59434	-0.37588	-0.00021342	3.6383	0.0020658	3.2624	0.0018524	567.8060109910354	44.319	0.55684	45.163	44.862	45.419	0.84438					26	13	3	0	0	0	0.20789	1	4061	4061		13.775	0	1	323060			6809	10187	4716	4722	7865	7865					0.03288448127682386
ELHTELEY	8	Unmodified	_ELHTELEY_					0	0	0		nc|ENSG00000167216|Q8IYT4-2|KATNAL2;ENSG00000167216|ENST00000683218|KATNAL2	nc|ENSG00000167216|Q8IYT4-2|KATNAL2	nc|ENSG00000167216|Q8IYT4-2|KATNAL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2637939453125	2	517.245472	1032.47639	0.46679	0.00024145	0.14933	7.7239E-05	0.61612	0.00031869	517.2451434390799	78.267	0.57854	78.675	78.306	78.885	0.40826					26	13	3	0	0	0	0.4196	1	8890	8890		33.516	5.2613	1	171530			6810	6279	4717	4723	7866	7866					-0.0385483292727713
ELHVWVNVS	9	Unmodified	_ELHVWVNVS_					0	0	0		ENST00000299413.6_1_11:35832336-35832669:+|nuORF	ENST00000299413.6_1_11:35832336-35832669:+|nuORF	ENST00000299413.6_1_11:35832336-35832669:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.7847290039062	2	541.785099	1081.55564	-0.22268	-0.00012064	0.56378	0.00030545	0.3411	0.0001848	541.7852590351226	56.903	1.7601	56.891	56.59	58.35	-0.012203					157	62	4	0	0	0	0.22631	1	5191	5191		71.296	2.5089	1	5602900			6811	9781	4718	4724	7867	7867					0.01812858817538654
ELHVWVNVS	9	Unmodified	_ELHVWVNVS_					0	0	0		ENST00000299413.6_1_11:35832336-35832669:+|nuORF	ENST00000299413.6_1_11:35832336-35832669:+|nuORF	ENST00000299413.6_1_11:35832336-35832669:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.785888671875	2	541.785099	1081.55564	0.62478	0.0003385	-0.32404	-0.00017556	0.30074	0.00016294	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.51307	1	5280	5280		51.335	3.6781	1	5802700			6812	9781	4718	4724	7868	7868					0.01812858817538654
ELIAERSHCLL	11	Unmodified	_ELIAERSHCLL_					0	0	0			REV__ENSG00000156486|ENST00000287042|KCNS2	REV__ENSG00000156486|ENST00000287042|KCNS2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.345703125	2	642.342455	1282.67036	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.563	1	66.611	66.111	67.111	0.047722								0	0	0	0.56276	1	5900	5900		24.519	0	1		+		6813	20491	4719	4725	7869	7869					0.0403280023717798
ELIAPDLNEGF	11	Unmodified	_ELIAPDLNEGF_					0	0	0			REV__nc|ENSG00000124523|Q9NXA8-4|SIRT5	REV__nc|ENSG00000124523|Q9NXA8-4|SIRT5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.78485107421875	3	406.539799	1216.59757	-1.9198	-0.00078047	0.060153	2.4454E-05	-1.8596	-0.00075601	406.539735348608	30.736	0.46292	30.799	30.591	31.054	0.063124					55	22	3	0	0	0	0.17437	1	1388	1388		10.998	9.5794	1	256910	+		6814	18592	4720	4726	7870	7870					-0.0020663028462877264
ELIEAEGI	8	Unmodified	_ELIEAEGI_					0	0	0		ENSG00000137776|ENST00000380516|SLTM;ENST00000557950.5_1_15:59192841-59225743:-|nuORF	ENSG00000137776|ENST00000380516|SLTM	ENSG00000137776|ENST00000380516|SLTM	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2676086425781	2	437.231833	872.449113	-0.69894	-0.0003056	3.4544	0.0015104	2.7555	0.0012048	437.23317031545906	53.647	0.83906	53.622	53.305	54.144	-0.02475					31	19	2	0	0	0	0.4196	1	4774	4774		33.516	0	1	71730			6815	4234	4721	4727	7871	7871					0.00778683532348623
ELIEAEGI	8	Unmodified	_ELIEAEGI_					0	0	0		ENSG00000137776|ENST00000380516|SLTM;ENST00000557950.5_1_15:59192841-59225743:-|nuORF	ENSG00000137776|ENST00000380516|SLTM	ENSG00000137776|ENST00000380516|SLTM	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2677307128906	2	437.231833	872.449113	-0.71396	-0.00031216	3.4814	0.0015222	2.7675	0.00121	437.2333487777885	52.999	0.72869	52.975	52.621	53.35	-0.023849					31	18	2	0	0	0	0.4196	1	4744	4744		31.955	0	1	116660			6816	4234	4721	4727	7872	7872					0.00778683532348623
ELIEAEGI	8	Unmodified	_ELIEAEGI_					0	0	0		ENSG00000137776|ENST00000380516|SLTM;ENST00000557950.5_1_15:59192841-59225743:-|nuORF	ENSG00000137776|ENST00000380516|SLTM	ENSG00000137776|ENST00000380516|SLTM	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2679443359375	2	437.231833	872.449113	1.1265	0.00049252	1.7002	0.0007434	2.8267	0.0012359	437.2325398020889	53.031	1.4683	53.048	52.794	54.262	0.017487					56	40	2	0	0	0	0.4196	1	4650	4650		25.45	6.0902	1	109490			6817	4234	4721	4727	7873	7873					0.00778683532348623
ELIEQRYV	8	Unmodified	_ELIEQRYV_					0	0	0		ENST00000414066.1_1_10:38107898-38108846:-|nuORF	ENST00000414066.1_1_10:38107898-38108846:-|nuORF	ENST00000414066.1_1_10:38107898-38108846:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2681884765625	2	525.284931	1048.55531	-0.019432	-1.0208E-05	0.27723	0.00014562	0.2578	0.00013542	525.2849809771717	56.732	0.55827	57.129	56.898	57.456	0.39672					40	12	4	0	0	0	0.4196	1	5906	5906		24.203	1.1603	1	551580			6818	11358	4722	4728	7874	7874					0.032974390976505674
ELIEQRYV	8	Unmodified	_ELIEQRYV_					0	0	0		ENST00000414066.1_1_10:38107898-38108846:-|nuORF	ENST00000414066.1_1_10:38107898-38108846:-|nuORF	ENST00000414066.1_1_10:38107898-38108846:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	525.284931	1048.55531	-0.022631	-1.1888E-05	-0.094604	-4.9694E-05	-0.11723	-6.1582E-05	525.2848220134738	57.428	0.45525	57.415	57.24	57.695	-0.013168	0.13842	0.00015084	NaN	24.203	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102720			6819	11358	4722	4728							0.032974390976505674
ELIEQRYV	8	Unmodified	_ELIEQRYV_					0	0	0		ENST00000414066.1_1_10:38107898-38108846:-|nuORF	ENST00000414066.1_1_10:38107898-38108846:-|nuORF	ENST00000414066.1_1_10:38107898-38108846:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	525.284931	1048.55531	0.28699	0.00015075	-0.38463	-0.00020204	-0.097636	-5.1287E-05	525.2845831285942	57.438	0.35941	57.409	57.197	57.557	-0.029865	0.1319	-0.00015386	NaN	24.203	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92886			6820	11358	4722	4728							0.032974390976505674
ELIERLNGEP	10	Unmodified	_ELIERLNGEP_					0	0	0		ENSG00000112312|ENST00000230056|GMNN	ENSG00000112312|ENST00000230056|GMNN	ENSG00000112312|ENST00000230056|GMNN	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	585.3178100585938	2	585.311677	1168.6088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.471	1	57.454	56.954	57.954	-0.01643								0	0	0	0.45132	1	4868	4868		31.53	1.2121	1				6821	2655	4723	4729	7875	7875					0.031241918095020083
ELIGTDLTI	9	Unmodified	_ELIGTDLTI_					0	0	0			REV__ENSG00000158315|ENST00000372990|RHBDL2	REV__ENSG00000158315|ENST00000372990|RHBDL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7734680175781	2	487.773865	973.533177	0.67608	0.00032977	-0.43105	-0.00021025	0.24503	0.00011952	487.77347412068633	88.029	1.0335	88.179	87.768	88.802	0.15055					51	24	3	0	0	0	0.17307	1	8721	8721		79.451	13.648	1	758210	+		6822	20601	4724	4730	7876	7876					0.04535214629231632
ELIIKKKHQE	10	Unmodified	_ELIIKKKHQE_					0	0	0		CON__Q99PS0	CON__Q99PS0	CON__Q99PS0	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5913391113281	3	422.590717	1264.75032	0.34868	0.00014735	4.1113	0.0017374	4.4599	0.0018847	422.5923689571847	58.01	1.1959	58.12	57.495	58.691	0.11027					112	57	3	0	0	0	0.86446	1	4911	4911		30.569	3.5215	1	286690		+	6823	636	4725	4731	7877	7877					0.12853609902640528
ELIKHYKIR	9	Unmodified	_ELIKHYKIR_					0	0	0		ENSG00000136573|ENST00000259089|BLK	ENSG00000136573|ENST00000259089|BLK	ENSG00000136573|ENST00000259089|BLK	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	401.24627685546875	3	400.580152	1198.71863	-1.7912	-0.00071753	2.8672	0.0011486	1.076	0.00043102	400.5810902225448	111.65	0.42501	111.76	111.55	111.97	0.11118					38	12	4	0	0	0	0.20789	1	12013	12013		7.8045	0	1	12328000			6824	4121	4726	4732	7878	7878					0.1272166193934936
ELIKIAKP	8	Unmodified	_ELIKIAKP_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|18|1|sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|18|1|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3010559082031	2	456.299853	910.585153	-1.6896	-0.00077098	4.4336	0.0020231	2.744	0.0012521	456.30174360814857	51.937	1.2506	51.937	51.624	52.874	0					54	32	2	0	0	0	0.91977	1	4267	4267		45.952	7.1458	1	89537	+		6825	29573	4727	4733	7879	7879					0.1262842283365444
ELIKIAKP	8	Unmodified	_ELIKIAKP_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|18|1|sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|18|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30108642578125	2	456.299853	910.585153	-0.39388	-0.00017973	3.0173	0.0013768	2.6234	0.001197	456.3011476839791	49.644	1.4417	49.55	48.811	50.252	-0.093182					60	34	2	0	0	0	0.89962	1	3861	3861		38.806	12.01	1	144660	+		6826	29573	4727	4733	7880	7880					0.1262842283365444
ELIKIAKP	8	Unmodified	_ELIKIAKP_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|18|1|sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|18|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7925109863281	2	456.299853	910.585153	-1.4653	-0.0006686	1.5832	0.00072243	0.11796	5.3827E-05	456.30040580806474	40.213	2.1588	40.802	39.188	41.346	0.58915					89	53	4	0	0	0	0.4196	1	3291	3291		24.203	11.996	1	1645200	+		6827	29573	4727	4733	7881	7881					0.1262842283365444
ELIKNNTVD	9	Unmodified	_ELIKNNTVD_					0	0	0			REV__ENST00000341119.9_1_7:87488053-87489951:-|nuORF	REV__ENST00000341119.9_1_7:87488053-87489951:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2802734375	2	523.279846	1044.54514	-0.78804	-0.00041236	-0.25982	-0.00013596	-1.0479	-0.00054832	523.2791520366875	44.856	0.45226	45.7	45.501	45.954	0.84437					18	10	2	0	0	0	0.33718	1	4162	4162		62.107	5.3864	1	487830	+		6828	25254	4728	4734	7882	7882					0.02464831372435583
ELIKPIILI	9	Unmodified	_ELIKPIILI_					0	0	0			REV__ENST00000567385.5_1_16:48244807-48265838:-|nuORF	REV__ENST00000567385.5_1_16:48244807-48265838:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.361328125	2	526.359911	1050.70527	0.41493	0.0002184	1.9977	0.0010515	2.4127	0.0012699	526.3608149931753	33.292	1.7707	33.259	32.845	34.615	-0.032677					246	76	5	0	0	0	0.7932	1	1684	1684		12.959	1.4482	1	5110100	+		6829	18447	4729	4735	7883	7883					0.18194411107424457
ELIKTQRTRQ	10	Unmodified	_ELIKTQRTRQ_					0	0	0			REV__nc|ENSG00000126001|Q9BV73-2|CEP250	REV__nc|ENSG00000126001|Q9BV73-2|CEP250	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.91802978515625	3	424.917604	1271.73098	2.4551	0.0010432	-2.3021	-0.00097821	0.15295	6.4989E-05	424.9166073227166	25.134	0.57406	24.703	24.408	24.983	-0.4311					31	12	3	0	0	0	0.85692	1	1268	1268		36.318	1.1394	1	264060	+		6830	18690	4730	4736	7884	7884					0.10598653611737063
ELILKFEPLD	10	Unmodified	_ELILKFEPLD_					0	0	0		ENSG00000110756|ENST00000349215|HPS5;nc|ENSG00000110756|Q9UPZ3-2|HPS5	ENSG00000110756|ENST00000349215|HPS5	ENSG00000110756|ENST00000349215|HPS5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.56439208984375	3	406.232307	1215.67509	0.06194	2.5162E-05	2.6344	0.0010702	2.6963	0.0010953	406.2334952911118	60.914	0.27273	60.881	60.69	60.963	-0.032509					10	8	2	0	0	0	0.37624	1	5767	5767		19.263	0	1	49492			6831	2539	4731	4737	7885	7885					0.07588007651565931
ELILLPEPF	9	Unmodified	_ELILLPEPF_					0	0	0			REV__ENSG00000090924|ENST00000425673|PLEKHG2	REV__ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2734375	2	535.810251	1069.60595	-0.95343	-0.00051086	1.7547	0.00094018	0.80125	0.00042932	535.8108420574214	38.467	0.49619	38.989	38.79	39.287	0.52236					25	11	3	0	0	0	0.20789	1	3173	3173		35.618	10.044	1	186050	+		6832	16999	4732	4738	7886	7886					0.07392968422664126
ELINALIP	8	Unmodified	_ELINALIP_					0	0	0			REV__nc|ENSG00000263528|Q14164-2|IKBKE	REV__nc|ENSG00000263528|Q14164-2|IKBKE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.76812744140625	2	441.768386	881.522219	-1.395	-0.00061625	0.77723	0.00034336	-0.61772	-0.00027289	441.7686373014596	107.04	1.3051	107.18	106.55	107.86	0.13866					69	31	3	0	0	0	0.86288	1	11506	11506		26.796	0	1	2385100	+		6833	23953	4733	4739	7887	7887					0.07671857045625075
ELIPILLKL	9	Unmodified	_ELIPILLKL_					0	0	0		L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|47|2|sense	L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|47|2|sense	L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|47|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3604736328125	2	526.359911	1050.70527	-1.5421	-0.00081169	4.0218	0.0021169	2.4797	0.0013052	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.7932	1	2147	2147		21.96	2.5999	1	788470			6834	14584	4734	4740	7888	7888					0.1819441110740172
ELIRQRLKKA	10	Unmodified	_ELIRQRLKKA_					0	0	0			REV__chr19:17516280-17520944|44|21.3|0.4|5.72|+|0|PGLS,PGLS|1	REV__chr19:17516280-17520944|44|21.3|0.4|5.72|+|0|PGLS,PGLS|1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.606689453125	3	418.93834	1253.79319	-1.7285	-0.00072416	4.0577	0.0016999	2.3292	0.00097578	418.9399091602261	50.401	0.99564	50.401	50.06	51.056	0					39	25	2	0	0	0	0.37624	1	4082	4082		16.007	1.228	1	85658	+		6835	15682	4735	4741	7889	7889					0.17644424750733378
ELISDQGHRW	10	Unmodified	_ELISDQGHRW_					0	0	0			REV__ENSG00000070388|ENST00000215530|FGF22	REV__ENSG00000070388|ENST00000215530|FGF22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.8082275390625	2	620.807094	1239.59963	0.1525	9.4673E-05	1.892	0.0011746	2.0445	0.0012693	620.8084857499598	59.522	1.8774	60.075	59.343	61.22	0.55323					109	49	4	0	0	0	0.5442	1	6303	6303		53.089	3.0554	1	3699000	+		6836	16601	4736	4742	7890	7890					-0.010581567561530392
ELISPTVII	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ELISPTVII_					1	0	0		ENSG00000146233|ENST00000275016|CYP39A1	ENSG00000146233|ENST00000275016|CYP39A1	ENSG00000146233|ENST00000275016|CYP39A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8080444335938	2	513.807708	1025.60086	-0.47161	-0.00024232	2.9055	0.0014929	2.4339	0.0012506	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.67345	1	4135	4135		42.396	6.7778	1	1552900			6837	4828	4737	4743	7891	7891					0.08908664560067336
ELIVLILQLY	10	Unmodified	_ELIVLILQLY_					0	0	0		ENST00000433671.2_1_1:39325692-39325881:+|nuORF	ENST00000433671.2_1_1:39325692-39325881:+|nuORF	ENST00000433671.2_1_1:39325692-39325881:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.8817749023438	2	608.881207	1215.74786	4.9177	0.0029943	-1.4468	-0.0008809	3.471	0.0021134	608.8800497135209	107.73	0.32504	107.85	107.59	107.91	0.11715					40	13	4	0	0	0	0.85694	1	13158	13158		21.96	2.8564	1	4321600			6838	11688	4738	4744	7892	7892					0.14861761445013144
ELIVQKLL	8	Unmodified	_ELIVQKLL_					0	0	0		nc|ENSG00000108424|Q14974-2|KPNB1;ENSG00000108424|ENST00000290158|KPNB1	nc|ENSG00000108424|Q14974-2|KPNB1	nc|ENSG00000108424|Q14974-2|KPNB1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80621337890625	2	478.312961	954.611368	0.10745	5.1397E-05	2.351	0.0011245	2.4585	0.0011759	478.3138628205785	38.639	0.94873	38.611	38.039	38.988	-0.027843					30	21	2	0	0	0	0.4196	1	2668	2668		11.511	0	1	44740			6839	2406	4739	4745	7893	7893					0.13224692005132965
ELKAILRGF	9	Unmodified	_ELKAILRGF_					0	0	0		ENSG00000180182|ENST00000324817|MED14	ENSG00000180182|ENST00000324817|MED14	ENSG00000180182|ENST00000324817|MED14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.303466796875	2	523.821484	1045.62842	1.3493	0.00070679	-3.987	-0.0020885	-2.6377	-0.0013817	523.8189870139342	89.324	0.74817	89.774	89.365	90.113	0.45058					26	17	2	0	0	0	0.20789	1	10489	10489		25.574	10.709	1	112040			6840	7316	4740	4746	7894	7894					0.1074261261094307
ELKAMPITLHL	11	Unmodified	_ELKAMPITLHL_					0	0	0		nc|ENSG00000171703|Q15560-2|TCEA2;ENSG00000171703|ENST00000343484|TCEA2	nc|ENSG00000171703|Q15560-2|TCEA2	nc|ENSG00000171703|Q15560-2|TCEA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3692016601562	2	633.367941	1264.72133	-0.087569	-5.5464E-05	2.0471	0.0012966	1.9596	0.0012411	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.65746	2	9838	9838;9934		37.812	5.061	1	7059800			6841	6698	4741	4747	7895;7896	7895					0.09955749282016768
ELKAMPITLHL	11	Unmodified	_ELKAMPITLHL_					0	0	0		nc|ENSG00000171703|Q15560-2|TCEA2;ENSG00000171703|ENST00000343484|TCEA2	nc|ENSG00000171703|Q15560-2|TCEA2	nc|ENSG00000171703|Q15560-2|TCEA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3687744140625	2	633.367941	1264.72133	1.4714	0.00093196	0.41942	0.00026564	1.8909	0.0011976	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.66858	2	10026	10026;10376		27.047	0	1	11430000			6842	6698	4741	4747	7897;7898	7897					0.09955749282016768
ELKAMPITLHL	11	Unmodified	_ELKAMPITLHL_					0	0	0		nc|ENSG00000171703|Q15560-2|TCEA2;ENSG00000171703|ENST00000343484|TCEA2	nc|ENSG00000171703|Q15560-2|TCEA2	nc|ENSG00000171703|Q15560-2|TCEA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3690185546875	2	633.367941	1264.72133	1.5977	0.0010119	0.2751	0.00017424	1.8728	0.0011861	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.51578	3	11838	11597;11657;11838		49.536	17.902	1	10012000			6843	6698	4741	4747	7899;7900;7901	7901					0.09955749282016768
ELKAMPITLHL	11	Unmodified	_ELKAMPITLHL_					0	0	0		nc|ENSG00000171703|Q15560-2|TCEA2;ENSG00000171703|ENST00000343484|TCEA2	nc|ENSG00000171703|Q15560-2|TCEA2	nc|ENSG00000171703|Q15560-2|TCEA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3667602539062	2	633.367941	1264.72133	1.5936	0.0010093	0.46291	0.00029319	2.0565	0.0013025	633.3681450827713	95.612	2.2846	96.032	94.734	97.018	0.41963					200	55	4	0	0	0	0.68431	2	11611	11587;11611		24.519	0	1	3838500			6844	6698	4741	4747	7902;7903	7903					0.09955749282016768
ELKAMPITLHL	11	Unmodified	_ELKAMPITLHL_					0	0	0		nc|ENSG00000171703|Q15560-2|TCEA2;ENSG00000171703|ENST00000343484|TCEA2	nc|ENSG00000171703|Q15560-2|TCEA2	nc|ENSG00000171703|Q15560-2|TCEA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3689575195312	2	633.367941	1264.72133	2.3091	0.0014625	-0.43146	-0.00027328	1.8776	0.0011892	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.64964	1	11725	11725		36.447	18.185	1	10333000			6845	6698	4741	4747	7904	7904					0.09955749282016768
ELKAPRAR	8	Unmodified	_ELKAPRAR_					0	0	0		chr19:1611849-1615686|17|12.24|0.05|7.83|-|1|TCF3,TCF3|1;nc|ENSG00000071564|P15923-2|TCF3;ENSG00000071564|ENST00000262965|TCF3;nc|ENSG00000071564|P15923-3|TCF3	chr19:1611849-1615686|17|12.24|0.05|7.83|-|1|TCF3,TCF3|1	chr19:1611849-1615686|17|12.24|0.05|7.83|-|1|TCF3,TCF3|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.2720947265625	2	470.787976	939.561398	0.075317	3.5458E-05	-0.78254	-0.00036841	-0.70723	-0.00033295	470.7874549588321	92.26	0.94215	92.305	91.853	92.795	0.045448					29	21	2	0	0	0	0.4196	1	9637	9637		15.642	0	1	66832			6846	265	4742	4748	7905	7905					0.08920002119850778
ELKARISASA	10	Unmodified	_ELKARISASA_					0	0	0		ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.73395	1	8526	8526		42.864	1.4377	1	9288900			6847	2517	4743	4749	7906	7906					0.07224530363282611
ELKARISASA	10	Unmodified	_ELKARISASA_					0	0	0		ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303466796875	2	523.303655	1044.59276	-0.041206	-2.1563E-05	-0.13765	-7.2034E-05	-0.17886	-9.3597E-05	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.51401	2	9238	8986;9238		54.722	3.3869	1	12431000			6848	2517	4743	4749	7907;7908	7908					0.07224530363282611
ELKARISASA	10	Unmodified	_ELKARISASA_					0	0	0		ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3032836914062	2	523.303655	1044.59276	1.4247	0.00074556	-1.721	-0.00090062	-0.29632	-0.00015507	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.85981	1	9041	9041		35.152	4.8343	1	3882100			6849	2517	4743	4749	7909	7909					0.07224530363282611
ELKARISASA	10	Unmodified	_ELKARISASA_					0	0	0		ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3055419921875	2	523.303655	1044.59276	-0.178	-9.3149E-05	-0.24214	-0.00012672	-0.42015	-0.00021986	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.86047	1	8358	8358		23.523	0.94304	1	4158500			6850	2517	4743	4749	7910	7910					0.07224530363282611
ELKARISASA	10	Unmodified	_ELKARISASA_					0	0	0		ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3033447265625	2	523.303655	1044.59276	-0.1734	-9.0741E-05	-0.15994	-8.3699E-05	-0.33334	-0.00017444	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.86047	1	8717	8717		23.523	0.48021	1	13808000			6851	2517	4743	4749	7911	7911					0.07224530363282611
ELKARISASA	10	Unmodified	_ELKARISASA_					0	0	0		ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.85981	1	8881	8881		35.152	1.2304	1	13442000			6852	2517	4743	4749	7912	7912					0.07224530363282611
ELKARISASA	10	Unmodified	_ELKARISASA_					0	0	0		ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3035278320312	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.85981	1	10345	10345		35.152	0	1	11944000			6853	2517	4743	4749	7913	7913					0.07224530363282611
ELKARISASA	10	Unmodified	_ELKARISASA_					0	0	0		ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3034057617188	2	523.303655	1044.59276	-0.50611	-0.00026485	0.28637	0.00014986	-0.21974	-0.00011499	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.86587	1	10133	10133		29.17	0.020503	1	3970100			6854	2517	4743	4749	7914	7914					0.07224530363282611
ELKARISASA	10	Unmodified	_ELKARISASA_					0	0	0		ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	ENSG00000110244|ENST00000357780|APOA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3035888671875	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.86106	4	10582	10474;10582;10618;10691		33.922	1.1711	1	13160000			6855	2517	4743	4749	7915;7916;7917;7918	7916					0.07224530363282611
ELKARQAK	8	Unmodified	_ELKARQAK_					0	0	0			REV__ENSG00000161849|ENST00000257951|KRT84	REV__ENSG00000161849|ENST00000257951|KRT84	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28765869140625	2	472.287808	942.561064	-0.108	-5.1006E-05	-0.19809	-9.3555E-05	-0.30609	-0.00014456	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.87792	1	10168	10168		31.53	2.3803	1	46909000	+	+	6856	16022	4744	4750	7919	7919					0.0874858239999412
ELKCIEELL	9	Unmodified	_ELKCIEELL_					0	0	0		nc|ENSG00000254838|Q7Z2Y8|GVINP1	nc|ENSG00000254838|Q7Z2Y8|GVINP1	nc|ENSG00000254838|Q7Z2Y8|GVINP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.317138671875	2	545.29665	1088.57875	1.2595	0.00068683	-1.4671	-0.0008	-0.20755	-0.00011317	545.295301091766	90.661	0.47922	90.707	90.389	90.869	0.046448					19	11	2	0	0	0	0.20789	1	9426	9426		34.173	0	1	102790			6857	15293	4745	4751	7920	7920					0.038001168199798485
ELKDCYIHL	9	Unmodified	_ELKDCYIHL_					0	0	0		nc|ENSG00000170325|Q9NQV6-2|PRDM10;nc|ENSG00000170325|Q9NQV6-1|PRDM10;nc|ENSG00000170325|Q9NQV6-5|PRDM10;nc|ENSG00000170325|Q9NQV6|PRDM10;ENSG00000170325|ENST00000360871|PRDM10;nc|ENSG00000170325|Q9NQV6-7|PRDM10;nc|ENSG00000170325|Q9NQV6-6|PRDM10	nc|ENSG00000170325|Q9NQV6-2|PRDM10	nc|ENSG00000170325|Q9NQV6-2|PRDM10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3300170898438	2	567.286617	1132.55868	-1.396	-0.00079194	-2.4312	-0.0013792	-3.8272	-0.0021711	567.2853111244659	92.443	0.25644	92.629	92.471	92.728	0.18582					9	5	2	0	0	0	0.20789	1	9309	9309		21.96	1.9631	1	61205			6858	6577	4746	4752	7921	7921					-0.002296341199780727
ELKDSLADDDS	11	Unmodified	_ELKDSLADDDS_					0	0	0		ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3663940429688	2	604.269872	1206.52519	0.90404	0.00054628	2.5158	0.0015202	3.4199	0.0020665	604.2712969274382	105	0.28917	105.11	105.02	105.31	0.10766					8	6	2	0	0	0	0.17415	1	11194	11194		41.427	22.323	1	46160			6859	1337	4747	4753	7922	7922					-0.06981009148853445
ELKDSNKEFW	10	Unmodified	_ELKDSNKEFW_					0	0	0		nc|ENSG00000140932|Q8TAZ6-2|CMTM2;ENSG00000140932|ENST00000268595|CMTM2	nc|ENSG00000140932|Q8TAZ6-2|CMTM2	nc|ENSG00000140932|Q8TAZ6-2|CMTM2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3930053710938	2	648.31696	1294.61937	1.6039	0.0010399	-2.8559	-0.0018515	-1.2519	-0.00081165	648.3153175341552	106.03	0.27206	106.18	106.07	106.34	0.14843					9	6	3	0	0	0	0.37624	1	11340	11340		36.447	0	1	105900			6860	4464	4748	4754	7923	7923					-0.016158255360551266
ELKDTQSPSTC	11	Unmodified	_ELKDTQSPSTC_					0	0	0		ENSG00000149115|ENST00000358252|TNKS1BP1;nc|ENSG00000149115|Q9C0C2-2|TNKS1BP1;ENST00000528882.5_1_11:57067274-57087552:-|nuORF	ENSG00000149115|ENST00000358252|TNKS1BP1	ENSG00000149115|ENST00000358252|TNKS1BP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3665161132812	2	604.77681	1207.53907	0.90466	0.00054712	-2.5113	-0.0015188	-1.6067	-0.00097169	604.7751093997501	104.73	0.24464	104.84	104.78	105.02	0.10766					6	5	2	0	0	0	0.17347	1	11158	11158		36.447	18.122	1	35194			6861	4997	4749	4755	7924	7924					-0.056400549213776685
ELKDVILCI	9	Unmodified	_ELKDVILCI_					0	0	0		ENSG00000115020|ENST00000264380|PIKFYVE	ENSG00000115020|ENST00000264380|PIKFYVE	ENSG00000115020|ENST00000264380|PIKFYVE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3035888671875	2	523.301736	1044.58892	1.4247	0.00074556	1.9478	0.0010193	3.3725	0.0017648	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.77696	1	8838	8838		31.53	1.2121	1	3882100			6862	2807	4750	4756	7925	7925					0.06840724545213561
ELKEKKLM	8	Unmodified	_ELKEKKLM_					0	0	0			REV__ENSG00000066279|ENST00000367409|ASPM	REV__ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8039855957031	2	509.801903	1017.58925	1.253	0.0006388	2.312	0.0011787	3.5651	0.0018175	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.86677	1	8810	8810		27.882	1.1893	1	3243500	+		6863	16520	4751	4757	7926	7926					0.08116144265079583
ELKEKLLRGAR	11	Unmodified	_ELKEKLLRGAR_					0	0	0		CON__Q3MHN2	CON__Q3MHN2	CON__Q3MHN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.27276611328125	3	438.273499	1311.79867	-1.813	-0.00079457	0.59005	0.0002586	-1.2229	-0.00053597	438.2736679941031	107.15	1.2018	107.19	106.63	107.83	0.036118					118	28	5	0	0	0	0.75779	1	11447	11447		20.315	1.0523	1	2816400		+	6864	619	4752	4758	7927	7927					0.15524103542543344
ELKELKKKVTA	11	Unmodified	_ELKELKKKVTA_					0	0	0		nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4037475585938	2	643.905745	1285.79694	1.7941	0.0011552	1.7988	0.0011582	3.5929	0.0023135	643.9066446640328	107.86	0.41496	107.89	107.52	107.93	0.035622					22	9	3	0	0	0	0.17339	1	11826	11826		25.126	0	1	2252100			6865	5083	4753	4759	7928	7928					0.16547049733958374
ELKERKSSL	9	Unmodified	_ELKERKSSL_					0	0	0		ENSG00000151725|ENST00000281453|CENPU;nc|ENSG00000151725|Q71F23-2|CENPU	ENSG00000151725|ENST00000281453|CENPU	ENSG00000151725|ENST00000281453|CENPU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.31689453125	2	545.316763	1088.61897	-0.33932	-0.00018504	0.19506	0.00010637	-0.14427	-7.8672E-05	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.77696	1	8910	8910		31.53	1.2121	1	4710900			6866	5139	4754	4760	7929	7929					0.07820799534783873
ELKEVNLVVIS	11	Unmodified	_ELKEVNLVVIS_					0	0	0			REV__L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|33|2|sense	REV__L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|33|2|sense	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.8679809570312	2	621.868828	1241.7231	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.09	1	115.1	114.6	115.6	0.0094528								0	0	0	0.56276	1	13876	13876		15.333	1.8791	1		+		6867	29451	4755	4761	7930	7930					0.11191081571632822
ELKFKPLHL	9	Unmodified	_ELKFKPLHL_					0	0	0			REV__ENSG00000242550|ENST00000238508|SERPINB10	REV__ENSG00000242550|ENST00000238508|SERPINB10	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	562.842529296875	2	562.844959	1123.67537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.388	1	66.388	65.888	66.888	0								0	0	0	0.30416	1	5853	5853		29.15	3.5755	1		+		6868	23832	4756	4762	7931	7931					0.11847472162094164
ELKFLCLGRV	10	Unmodified	_ELKFLCLGRV_					0	0	0		ENSG00000168040|ENST00000301838|FADD	ENSG00000168040|ENST00000301838|FADD	ENSG00000168040|ENST00000301838|FADD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427124023438	2	589.341726	1176.6689	0.81285	0.00047905	0.87586	0.00051618	1.6887	0.00099523	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.86587	1	9260	9260		29.17	0	1	6450100			6869	6362	4757	4763	7932	7932					0.08763210939059718
ELKFLCLGRV	10	Unmodified	_ELKFLCLGRV_					0	0	0		ENSG00000168040|ENST00000301838|FADD	ENSG00000168040|ENST00000301838|FADD	ENSG00000168040|ENST00000301838|FADD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3431396484375	2	589.341726	1176.6689	-1.324	-0.0007803	3.288	0.0019378	1.964	0.0011575	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86698	1	9711	9711		28.081	0.19925	1	17904000			6870	6362	4757	4763	7933	7933					0.08763210939059718
ELKFLIADKG	10	Unmodified	_ELKFLIADKG_					0	0	0			REV__ENST00000452380.6_1_10:17194042-17210877:-|nuORF	REV__ENST00000452380.6_1_10:17194042-17210877:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.32958984375	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.86106	1	11207	11207		33.922	1.1711	1	6007000	+		6871	17667	4758	4764	7934	7934					0.0881915819995811
ELKFLLVLA	9	Unmodified	_ELKFLLVLA_					0	0	0		ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.336436	1044.65832	-1.539	-0.00080542	3.5179	0.0018411	1.9789	0.0010356	523.3389848119169	88.225	0.3636	88.395	88.211	88.574	0.16923					12	8	2	0	0	0	0.20789	1	8715	8715		23.042	0	1	98715			6872	6933	4759	4765	7935	7935					0.13777551556290746
ELKFLQKVE	9	Unmodified	_ELKFLQKVE_					0	0	0		ENSG00000136197|ENST00000350427|C7orf25;nc|nan|Q9BPX7-2|C7orf25	ENSG00000136197|ENST00000350427|C7orf25	ENSG00000136197|ENST00000350427|C7orf25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3295288085938	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.70638	1	9581	9581		40.058	6.1365	1	18558000			6873	4095	4760	4766	7936	7936					0.08819158199980848
ELKFRKQR	8	Unmodified	_ELKFRKQR_					0	0	0			REV__ENSG00000170608|ENST00000302177|FOXA3	REV__ENSG00000170608|ENST00000302177|FOXA3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8297729492188	2	552.835457	1103.65636	0.26084	0.0001442	-3.3716	-0.001864	-3.1108	-0.0017198	553.3350120383104	88.088	0.75755	88.289	87.628	88.386	0.20114					20	17	2	0	0	0	0.4196	1	8666	8666		49.442	7.0454	1	62721	+		6874	21674	4761	4767	7937	7937					0.10867935591022615
ELKFRKQR	8	Unmodified	_ELKFRKQR_					0	0	0			REV__ENSG00000170608|ENST00000302177|FOXA3	REV__ENSG00000170608|ENST00000302177|FOXA3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	552.835457	1103.65636	-1.1118	-0.00061463	-2.1602	-0.0011942	-3.272	-0.0018089	552.8336256834853	87.911	0.16718	88.375	88.27	88.437	0.46312	0.042863	0.0010232	NaN	49.442	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72409	+		6875	21674	4761	4767							0.10867935591022615
ELKFVTLVFR	10	Unmodified	_ELKFVTLVFR_					0	0	0		ENST00000493235.5_1_3:132036276-132056343:+|nuORF;nc|ENSG00000014257|P15309-3|ACP3;ENSG00000014257|ENST00000336375|ACP3;nc|ENSG00000014257|P15309-2|ACP3	ENST00000493235.5_1_3:132036276-132056343:+|nuORF	ENST00000493235.5_1_3:132036276-132056343:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.9223937988281	3	417.920174	1250.73869	3.1807	0.0013293	1.9124	0.00079924	5.0931	0.0021285	417.9209605426618	105.73	2.7025	105.77	104.99	107.7	0.038322					262	63	6	0	0	0	0.8486	1	11574	11574		17.833	6.3785	1	23553000			6876	816	4762	4768	7938	7938					0.12335412879338037
ELKHFRFL	8	Unmodified	_ELKHFRFL_					0	0	0		nc|nan|Q8WVX3-2|C4orf3	nc|nan|Q8WVX3-2|C4orf3	nc|nan|Q8WVX3-2|C4orf3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.31640625	2	545.313826	1088.6131	1.0848	0.00059155	4.2039	0.0022924	5.2887	0.002884	545.315967153513	102.19	0.76801	102.46	102.11	102.88	0.26322					52	18	4	0	0	0	0.89043	1	12417	12417		35.618	7.736	1	914450			6877	15374	4763	4769	7939	7939					0.07233745813755377
ELKHGMTL	8	Unmodified	_ELKHGMTL_					0	0	0		ENSG00000120708|ENST00000442011|TGFBI;ENST00000515433.1_1_5:135382542-135382743:+|nuORF;ENST00000506699.5_1_5:135382542-135383974:+|nuORF	ENSG00000120708|ENST00000442011|TGFBI	ENSG00000120708|ENST00000442011|TGFBI	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.7486572265625	2	464.74967	927.484787	0.42856	0.00019917	-3.8072	-0.0017694	-3.3786	-0.0015702	464.7476979311871	27.467	0.4567	27.508	27.277	27.733	0.040834					26	14	3	0	0	0	0.93293	1	1228	1228		51.335	1.3109	1	54961			6878	3147	4764	4770	7940	7940					0.01814442508373304
ELKIEELTKI	10	Unmodified	_ELKIEELTKI_					0	0	0			REV__ENSG00000058673|ENST00000367210|ZC3H11A	REV__ENSG00000058673|ENST00000367210|ZC3H11A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.9122314453125	3	405.911345	1214.7122	1.2294	0.00049903	0.53018	0.00021521	1.7596	0.00071423	405.9115005832532	37.578	1.9473	37.891	36.841	38.788	0.31312					140	48	5	0	0	0	0.42897	1	3052	3052		61.691	5.2575	1	6110800	+		6879	16439	4765	4771	7941	7941					0.11343679197329948
ELKIKRSLFTY	11	Unmodified	_ELKIKRSLFTY_					0	0	0		nc|ENSG00000186522|Q9P0V9-3|SEPTIN10;ENSG00000186522|ENST00000397712|SEPTIN10;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.6083984375	3	466.609889	1396.80784	-0.1162	-5.4221E-05	-3.8942	-0.0018171	-4.0104	-0.0018713	466.608028235663	100.63	2.2402	100.66	99.377	101.62	0.031036					154	52	4	0	0	0	0.74002	1	10703	10703		24.276	5.7449	1	499520			6880	7802	4766	4772	7942	7942					0.12530452108217105
ELKIKRSLFTY	11	Unmodified	_ELKIKRSLFTY_					0	0	0		nc|ENSG00000186522|Q9P0V9-3|SEPTIN10;ENSG00000186522|ENST00000397712|SEPTIN10;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.6082763671875	3	466.609889	1396.80784	-0.99182	-0.00046279	-2.9264	-0.0013655	-3.9182	-0.0018283	466.6084303998886	100.17	2.2081	100.39	99.16	101.37	0.21511					171	52	4	0	0	0	0.70278	2	10390	10390;10427		31.068	7.6902	1	609920			6881	7802	4766	4772	7943;7944	7943					0.12530452108217105
ELKIKRSLFTY	11	Unmodified	_ELKIKRSLFTY_					0	0	0		nc|ENSG00000186522|Q9P0V9-3|SEPTIN10;ENSG00000186522|ENST00000397712|SEPTIN10;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	466.609889	1396.80784	1.2664	0.00059093	-5.2608	-0.0024547	-3.9944	-0.0018638	466.60735875055485	99.954	1.4723	100.29	99.689	101.16	0.33295	-0.10422	-0.0012693	NaN	31.068	84	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310490			6882	7802	4766	4772							0.12530452108217105
ELKIKRSLFTY	11	Unmodified	_ELKIKRSLFTY_					0	0	0		nc|ENSG00000186522|Q9P0V9-3|SEPTIN10;ENSG00000186522|ENST00000397712|SEPTIN10;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	466.609889	1396.80784	1.7468	0.00081509	-5.7707	-0.0026927	-4.0238	-0.0018776	466.60708058634947	100.05	2.1066	100.4	99.392	101.5	0.34591	0.0093873	-0.001983	NaN	31.068	133	52	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	526140			6883	7802	4766	4772							0.12530452108217105
ELKILVICT	9	Unmodified	_ELKILVICT_					0	0	0		ENST00000466391.1_1_3:194371468-194371945:-|nuORF	ENST00000466391.1_1_3:194371468-194371945:-|nuORF	ENST00000466391.1_1_3:194371468-194371945:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.31396484375	2	516.312103	1030.60965	0.87601	0.00045229	2.4044	0.0012414	3.2804	0.0016937	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.69624	1	10781	10781		40.778	2.9666	1	67025000			6884	12133	4767	4773	7945	7945					0.09557314924882121
ELKKAGRRYG	10	Unmodified	_ELKKAGRRYG_					0	0	0			REV__nc|ENSG00000012048|P38398-8|BRCA1	REV__nc|ENSG00000012048|P38398-8|BRCA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3433837890625	2	589.343646	1176.67274	-0.36759	-0.00021664	-0.80413	-0.00047391	-1.1717	-0.00069055	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.8651	1	9561	9561		25.574	0	1	11103000	+		6885	15654	4768	4774	7946	7946					0.09147016757151505
ELKKAGRRYG	10	Unmodified	_ELKKAGRRYG_					0	0	0			REV__nc|ENSG00000012048|P38398-8|BRCA1	REV__nc|ENSG00000012048|P38398-8|BRCA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3427124023438	2	589.343646	1176.67274	-0.67475	-0.00039766	-0.80911	-0.00047684	-1.4839	-0.0008745	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.80179	1	9473	9473		39.253	8.684	1	5429300	+		6886	15654	4768	4774	7947	7947					0.09147016757151505
ELKKAGRRYG	10	Unmodified	_ELKKAGRRYG_					0	0	0			REV__nc|ENSG00000012048|P38398-8|BRCA1	REV__nc|ENSG00000012048|P38398-8|BRCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3425903320312	2	589.343646	1176.67274	0.81285	0.00047905	-2.3819	-0.0014037	-1.569	-0.00092468	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.80179	3	9202	9202;9214;9226		39.253	7.0705	1	6450100	+		6887	15654	4768	4774	7948;7949;7950	7948					0.09147016757151505
ELKKAGRRYG	10	Unmodified	_ELKKAGRRYG_					0	0	0			REV__nc|ENSG00000012048|P38398-8|BRCA1	REV__nc|ENSG00000012048|P38398-8|BRCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3436279296875	2	589.343646	1176.67274	0.83312	0.00049099	-2.1148	-0.0012464	-1.2817	-0.00075536	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.80179	2	9970	9788;9970		39.253	8.7492	1	20363000	+		6888	15654	4768	4774	7951;7952	7952					0.09147016757151505
ELKKAGRRYG	10	Unmodified	_ELKKAGRRYG_					0	0	0			REV__nc|ENSG00000012048|P38398-8|BRCA1	REV__nc|ENSG00000012048|P38398-8|BRCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3424682617188	2	589.343646	1176.67274	-1.324	-0.00078029	-0.19058	-0.00011232	-1.5146	-0.00089261	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.80179	1	9136	9136		39.253	5.3312	1	5946500	+		6889	15654	4768	4774	7953	7953					0.09147016757151505
ELKKHLKQAL	10	Unmodified	_ELKKHLKQAL_					0	0	0		nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.246826171875	3	403.255557	1206.74484	2.7171	0.0010957	2.5532	0.0010296	5.2703	0.0021253	403.2570627854975	104.93	0.58801	104.88	104.73	105.32	-0.04039					15	13	2	0	0	0	0.37624	1	11583	11583		26.063	2.5407	1	133130			6890	2532	4769	4775	7954	7954					0.149739311108533
ELKKKLAN	8	Unmodified	_ELKKKLAN_					0	0	0		nc|ENSG00000059769|Q9H1X3-2|DNAJC25;ENST00000463589.5_1_9:114405367-114415499:+|nuORF;ENSG00000059769|ENST00000313525|DNAJC25	nc|ENSG00000059769|Q9H1X3-2|DNAJC25	nc|ENSG00000059769|Q9H1X3-2|DNAJC25	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2875671386719	2	472.300384	942.586216	0.72657	0.00034316	-2.1992	-0.0010387	-1.4726	-0.00069553	472.29922798302874	95.289	0.36935	95.452	95.351	95.721	0.16316					13	8	3	0	0	0	0.4196	1	9805	9805		35.618	24.753	1	579540			6891	1057	4770	4776	7955	7955					0.112626372025602
ELKKKTNI	8	Unmodified	_ELKKKTNI_					0	0	0			REV__ENSG00000264424|ENST00000255381|MYH4;REV__ENSG00000109061|ENST00000226207|MYH1;REV__ENSG00000125414|ENST00000245503|MYH2	REV__ENSG00000109061|ENST00000226207|MYH1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7906799316406	2	487.305667	972.596781	-1.3031	-0.00063501	-3.9869	-0.0019428	-5.29	-0.0025778	487.30343895461965	84.18	0.21706	84.239	84.154	84.371	0.059258					7	4	2	0	0	0	0.4196	1	8502	8502		14.137	0	1	16318	+		6892	17743;23957;18642	4771	4777	7956	7956					0.10938619856995047
ELKKLFAKI	9	Unmodified	_ELKKLFAKI_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3170166015625	2	545.35516	1088.69577	2.236	0.0012194	-0.90665	-0.00049445	1.3293	0.00072495	545.3549230245646	90.795	0.11836	90.728	90.643	90.761	-0.067093					4	2	2	0	0	0	0.20789	1	9527	9527		24.519	3.5723	1	30906	+		6893	20278	4772	4778	7957	7957					0.1549664282190406
ELKKLKMV	8	Oxidation (M)	_ELKKLKM(Oxidation (M))V_		ELKKLKM(1)V		ELKKLKM(50)V	0	0	1			REV__nc|ENSG00000166821|O75192-2|PEX11A	REV__nc|ENSG00000166821|O75192-2|PEX11A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8140869140625	2	502.81227	1003.60999	2.3403	0.0011767	0.37168	0.00018689	2.712	0.0013636	502.8125095454433	97.334	3.7238	97.279	96.672	100.4	-0.055542					261	86	6	0	0	0	0.92973	1	10536	10536		50.025	7.5501	1	22474000	+		6894	21325	4773	4779	7958	7958		316			0.10832734644748143
ELKKLKMV	8	Oxidation (M)	_ELKKLKM(Oxidation (M))V_		ELKKLKM(1)V		ELKKLKM(41)V	0	0	1			REV__nc|ENSG00000166821|O75192-2|PEX11A	REV__nc|ENSG00000166821|O75192-2|PEX11A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	502.8139343261719	2	502.81227	1003.60999	-0.46142	-0.00023201	3.207	0.0016125	2.7456	0.0013805	502.81389715137584	97.081	3.6095	97.312	96.652	100.26	0.23103					270	84	6	0	0	0	0.90465	1	10000	10000		40.573	7.057	1	29832000	+		6895	21325	4773	4779	7959	7959		316			0.10832734644748143
ELKKLKMV	8	Oxidation (M)	_ELKKLKM(Oxidation (M))V_		ELKKLKM(1)V		ELKKLKM(41)V	0	0	1			REV__nc|ENSG00000166821|O75192-2|PEX11A	REV__nc|ENSG00000166821|O75192-2|PEX11A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	502.81390380859375	2	502.81227	1003.60999	0.77487	0.00038961	2.0575	0.0010346	2.8324	0.0014242	502.8133310235605	97.118	3.7782	97.281	96.705	100.48	0.16317					264	87	5	0	0	0	0.90465	1	10099	10099		40.573	7.057	1	19692000	+		6896	21325	4773	4779	7960	7960		316			0.10832734644748143
ELKKLKMV	8	Oxidation (M)	_ELKKLKM(Oxidation (M))V_		ELKKLKM(1)V		ELKKLKM(41)V	0	0	1			REV__nc|ENSG00000166821|O75192-2|PEX11A	REV__nc|ENSG00000166821|O75192-2|PEX11A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.81402587890625	2	502.81227	1003.60999	1.4802	0.00074428	1.8169	0.00091354	3.2971	0.0016578	502.81319262622696	97.079	3.8751	97.469	96.863	100.74	0.39065					217	95	5	0	0	0	0.90465	1	11695	11695		40.573	7.057	1	11311000	+		6897	21325	4773	4779	7961	7961		316			0.10832734644748143
ELKKLKMVVK	10	Unmodified	_ELKKLKMVVK_					0	0	0			REV__nc|ENSG00000166821|O75192-2|PEX11A	REV__nc|ENSG00000166821|O75192-2|PEX11A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.78515625	3	405.933427	1214.77845	-1.912	-0.00077614	0.44859	0.0001821	-1.4634	-0.00059405	405.9336366031219	34.884	0.91638	34.923	34.424	35.34	0.038643					64	34	2	0	0	0	0.37624	1	1758	1758		12.957	0	1	118790	+		6898	21325	4774	4780	7962	7962					0.17965216558400243
ELKKLKMVVK	10	Unmodified	_ELKKLKMVVK_					0	0	0			REV__nc|ENSG00000166821|O75192-2|PEX11A	REV__nc|ENSG00000166821|O75192-2|PEX11A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852478027344	3	405.933427	1214.77845	-0.036692	-1.4895E-05	-1.2952	-0.00052578	-1.3319	-0.00054067	405.9327195078824	34.87	0.81162	34.815	34.402	35.214	-0.055149					76	36	3	0	0	0	0.37624	1	1744	1744		13.508	2.4112	1	82457	+		6899	21325	4774	4780	7963	7963					0.17965216558400243
ELKKLKNQHK	10	Unmodified	_ELKKLKNQHK_					0	0	0			REV__nc|ENSG00000171444|P23508|MCC	REV__nc|ENSG00000171444|P23508|MCC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.59405517578125	3	422.594461	1264.76155	-1.6666	-0.00070429	-1.2985	-0.00054872	-2.965	-0.001253	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.85285	1	4703	4703		16.717	1.3843	1	771770	+		6900	21727	4775	4781	7964	7964					0.13976431996798055
ELKKLKNQHK	10	Unmodified	_ELKKLKNQHK_					0	0	0			REV__nc|ENSG00000171444|P23508|MCC	REV__nc|ENSG00000171444|P23508|MCC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59295654296875	3	422.594461	1264.76155	-0.62547	-0.00026432	-2.6174	-0.0011061	-3.2429	-0.0013704	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.86207	1	4920	4920		24.232	0.85391	1	1069500	+		6901	21727	4775	4781	7965	7965					0.13976431996798055
ELKKLKNQHK	10	Unmodified	_ELKKLKNQHK_					0	0	0			REV__nc|ENSG00000171444|P23508|MCC	REV__nc|ENSG00000171444|P23508|MCC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5922546386719	3	422.594461	1264.76155	-1.8059	-0.00076316	-2.4921	-0.0010531	-4.298	-0.0018163	422.5932330431751	57.933	1.2573	58.013	57.628	58.885	0.079643					127	59	3	0	0	0	0.86409	1	4925	4925		25.126	1.7481	1	268900	+		6902	21727	4775	4781	7966	7966					0.13976431996798055
ELKKLKNQHK	10	Unmodified	_ELKKLKNQHK_					0	0	0			REV__nc|ENSG00000171444|P23508|MCC	REV__nc|ENSG00000171444|P23508|MCC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5915222167969	3	422.594461	1264.76155	-0.81678	-0.00034517	-3.5347	-0.0014938	-4.3515	-0.0018389	422.59284282323074	58.274	1.5988	58.267	57.538	59.137	-0.0074387					138	72	3	0	0	0	0.86151	2	4957	4957;4982		28.081	7.2443	1	237230	+		6903	21727	4775	4781	7967;7968	7967					0.13976431996798055
ELKKLQIFG	9	Unmodified	_ELKKLQIFG_					0	0	0		ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	ENSG00000073614|ENST00000399788|KDM5A	ENSG00000073614|ENST00000399788|KDM5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3274536132812	2	538.329142	1074.64373	-1.4902	-0.0008022	-1.886	-0.0010153	-3.3762	-0.0018175	538.3280364010775	103.36	1.0546	103.48	103.07	104.12	0.11495					72	26	3	0	0	0	0.78058	1	10934	10934		30.504	4.9296	1	1412200			6904	1294	4776	4782	7969	7969					0.10939479408148145
ELKKLWQT	8	Unmodified	_ELKKLWQT_					0	0	0			REV__nc|ENSG00000101280|Q9Y264-2|ANGPT4	REV__nc|ENSG00000101280|Q9Y264-2|ANGPT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3038330078125	2	523.305667	1044.59678	-0.041393	-2.1661E-05	-4.0495	-0.0021191	-4.0909	-0.0021408	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.89679	1	8581	8581		37.812	1.3648	1	3850300	+		6905	17261	4777	4783	7970	7970					0.0762661985700106
ELKKPPCV	8	Unmodified	_ELKKPPCV_					0	0	0			REV__ENSG00000197081|ENST00000356956|IGF2R	REV__ENSG00000197081|ENST00000356956|IGF2R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2638244628906	2	457.262413	912.510274	-0.13162	-6.0186E-05	4.3904	0.0020076	4.2588	0.0019474	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.87064	2	7815	7709;7815		37.159	4.9468	1	1194000	+		6906	23195	4778	4784	7971;7972	7972					0.05051917030777986
ELKKPPCV	8	Unmodified	_ELKKPPCV_					0	0	0			REV__ENSG00000197081|ENST00000356956|IGF2R	REV__ENSG00000197081|ENST00000356956|IGF2R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26373291015625	2	457.262413	912.510274	0.52869	0.00024175	3.5661	0.0016306	4.0948	0.0018724	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.87064	15	8598	8330;8354;8390;8402;8438;8488;8500;8512;8537;8561;8598;8622;8646;8682;8708		55.504	24.539	1	4885100	+		6907	23195	4778	4784	7973;7974;7975;7976;7977;7978;7979;7980;7981;7982;7983;7984;7985;7986;7987	7983					0.05051917030777986
ELKKPPCV	8	Unmodified	_ELKKPPCV_					0	0	0			REV__ENSG00000197081|ENST00000356956|IGF2R	REV__ENSG00000197081|ENST00000356956|IGF2R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.26263427734375	2	457.262413	912.510274	0.26759	0.00012236	3.9569	0.0018093	4.2245	0.0019317	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.84341	2	7766	7766;7873		29.15	3.6994	1	1458600	+		6908	23195	4778	4784	7988;7989	7988					0.05051917030777986
ELKKPPCV	8	Unmodified	_ELKKPPCV_					0	0	0			REV__ENSG00000197081|ENST00000356956|IGF2R	REV__ENSG00000197081|ENST00000356956|IGF2R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2640075683594	2	457.262413	912.510274	0.43756	0.00020008	3.6399	0.0016644	4.0774	0.0018645	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.87064	13	8280	8256;8280;8292;8304;8369;8381;8393;8417;8443;8516;8528;8552;8564		45.952	13.997	1	4814400	+		6909	23195	4778	4784	7990;7991;7992;7993;7994;7995;7996;7997;7998;7999;8000;8001;8002	7991					0.05051917030777986
ELKKPPCV	8	Unmodified	_ELKKPPCV_					0	0	0			REV__ENSG00000197081|ENST00000356956|IGF2R	REV__ENSG00000197081|ENST00000356956|IGF2R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2638244628906	2	457.262413	912.510274	0.57167	0.0002614	3.6646	0.0016757	4.2363	0.0019371	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.87064	6	7574	7537;7557;7574;7581;7682;7706		45.952	17.698	1	1262800	+		6910	23195	4778	4784	8003;8004;8005;8006;8007;8008	8005					0.05051917030777986
ELKKRGHKVL	10	Unmodified	_ELKKRGHKVL_					0	0	0		chr10:94608026-94609853|57|13.53|0.54|4.65|+|ENST00000371327|HELLS,HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;chr10:94545907-94546377|63|48.13|0.65|6.2|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS	chr10:94608026-94609853|57|13.53|0.54|4.65|+|ENST00000371327|HELLS,HELLS	chr10:94608026-94609853|57|13.53|0.54|4.65|+|ENST00000371327|HELLS,HELLS	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3662109375	2	604.385314	1206.75608	0.90457	0.00054671	-4.3931	-0.0026551	-3.4885	-0.0021084	604.3816744110746	104.6	0.15614	104.71	104.63	104.79	0.11684					7	3	3	0	0	0	0.37624	1	11122	11122		10.265	0	1	402800			6911	92	4779	4785	8009	8009					0.16096753205010828
ELKKSEKGSK	10	Unmodified	_ELKKSEKGSK_					0	0	0		ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3298950195312	2	567.32987	1132.64519	-1.3957	-0.00079181	1.2535	0.00071113	-0.14221	-8.0679E-05	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86698	1	9466	9466		28.081	1.0342	1	17338000			6912	3405	4780	4786	8010	8010					0.08417068706262398
ELKKVNLN	8	Unmodified	_ELKKVNLN_					0	0	0		ENSG00000118246|ENST00000402774|FASTKD2;nc|ENSG00000118246|Q9NYY8-2|FASTKD2;ENST00000487777.5_1_2:207631381-207653673:+|nuORF	ENSG00000118246|ENST00000402774|FASTKD2	ENSG00000118246|ENST00000402774|FASTKD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773132324219	2	479.290017	956.565481	-0.83293	-0.00039922	-2.2319	-0.0010697	-3.0648	-0.0014689	479.28863556151776	83.745	0.21954	83.804	83.629	83.849	0.059258					5	4	2	0	0	0	0.4196	1	8411	8411		29.15	1.2673	1	33273			6913	3020	4781	4787	8011	8011					0.08546046822903008
ELKKVNLN	8	Unmodified	_ELKKVNLN_					0	0	0		ENSG00000118246|ENST00000402774|FASTKD2;nc|ENSG00000118246|Q9NYY8-2|FASTKD2;ENST00000487777.5_1_2:207631381-207653673:+|nuORF	ENSG00000118246|ENST00000402774|FASTKD2	ENSG00000118246|ENST00000402774|FASTKD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27740478515625	2	479.290017	956.565481	-0.83626	-0.00040081	0.17021	8.1582E-05	-0.66604	-0.00031923	479.2900269529715	83.524	0.17448	83.689	83.536	83.711	0.1651					5	3	2	0	0	0	0.4196	1	8069	8069		26.693	0	1	31116			6914	3020	4781	4787	8012	8012					0.08546046822903008
ELKLKKALADI	11	Unmodified	_ELKLKKALADI_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3927612304688	2	621.395013	1240.77547	-0.078752	-4.8936E-05	-3.5843	-0.0022272	-3.663	-0.0022762	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.6493	1	10797	10797		38.754	0.94209	1	10411000	+		6915	18606	4782	4788	8013	8013					0.1647166470522734
ELKLKKALADI	11	Unmodified	_ELKLKKALADI_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.392822265625	2	621.395013	1240.77547	-0.28789	-0.0001789	-3.4371	-0.0021358	-3.725	-0.0023147	621.392781910036	104.72	2.6015	104.71	104.23	106.84	-0.014809					230	61	5	0	0	0	0.68532	1	11290	11290		33.922	3.6039	1	11881000	+		6916	18606	4782	4788	8014	8014					0.1647166470522734
ELKLKKALADI	11	Unmodified	_ELKLKKALADI_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.392822265625	2	621.395013	1240.77547	0.6984	0.00043398	-4.3508	-0.0027036	-3.6524	-0.0022696	621.3922056168815	104.57	2.6797	104.61	104.09	106.77	0.039856					250	63	5	0	0	0	0.67778	2	11388	11388;11448		35.152	6.0025	1	13976000	+		6917	18606	4782	4788	8015;8016	8015					0.1647166470522734
ELKLKKALADI	11	Unmodified	_ELKLKKALADI_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3930053710938	2	621.395013	1240.77547	0.92124	0.00057246	-3.6888	-0.0022922	-2.7676	-0.0017198	621.3925512557826	106.19	2.0795	106.29	105.91	107.99	0.099007					149	50	5	0	0	0	0.7144	1	11411	11411		29.17	4.6509	1	2148500	+		6918	18606	4782	4788	8017	8017					0.1647166470522734
ELKLKKALADI	11	Unmodified	_ELKLKKALADI_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3927001953125	2	621.395013	1240.77547	-1.2196	-0.00075786	-2.6137	-0.0016241	-3.8333	-0.002382	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.732	1	10982	10982		26.063	0	1	23459000	+		6919	18606	4782	4788	8018	8018					0.1647166470522734
ELKLKKALADI	11	Unmodified	_ELKLKKALADI_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3933715820312	2	621.395013	1240.77547	-1.2196	-0.00075786	-1.5776	-0.00098032	-2.7972	-0.0017382	621.3939066015827	106.23	1.0134	106.28	106.14	107.15	0.053757					87	23	4	0	0	0	0.7434	1	11358	11358		23.523	3.5259	1	1823300	+		6920	18606	4782	4788	8019	8019					0.1647166470522734
ELKLQVKAF	9	Unmodified	_ELKLQVKAF_					0	0	0		nc|ENSG00000166349|P15918-2|RAG1;ENSG00000166349|ENST00000299440|RAG1	nc|ENSG00000166349|P15918-2|RAG1	nc|ENSG00000166349|P15918-2|RAG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8278198242188	2	538.329142	1074.64373	1.5056	0.00081049	-1.6579	-0.00089248	-0.15231	-8.1992E-05	538.3284255259326	103.87	1.4611	104.06	103.6	105.06	0.18888					70	36	3	0	0	0	0.20789	1	12765	12765		15.642	0	1	203620			6921	6183	4783	4789	8020	8020					0.10939479408125408
ELKLTDKILPV	11	Unmodified	_ELKLTDKILPV_					0	0	0		nc|ENSG00000173575|O14647-2|CHD2;ENSG00000173575|ENST00000394196|CHD2	nc|ENSG00000173575|O14647-2|CHD2	nc|ENSG00000173575|O14647-2|CHD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.892578125	2	634.894846	1267.77514	-1.1756	-0.00074638	-2.7008	-0.0017147	-3.8764	-0.0024611	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.58516	1	11211	11211		44.377	1.5129	1	66671000			6922	6870	4784	4790	8021	8021					0.15196244985372687
ELKLVKLL	8	Unmodified	_ELKLVKLL_					0	0	0			REV__chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	REV__chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3204345703125	2	478.331153	954.647754	-1.3253	-0.00063393	1.3178	0.00063036	-0.0074682	-3.5723E-06	478.33172987891595	59.453	0.66546	60.006	59.653	60.319	0.55323					27	16	2	0	0	0	0.4196	1	6246	6246		14.664	0	1	367090	+		6923	15748	4785	4791	8022	8022					0.16861568901856572
ELKMQLAK	8	Unmodified	_ELKMQLAK_					0	0	0		ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11	ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000133392|P35749-4|MYH11	nc|ENSG00000133392|P35749-4|MYH11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.8006591796875	2	480.78097	959.547388	2.0182	0.0009703	1.8141	0.0008722	3.8323	0.0018425	480.78195964854217	95.384	0.70023	95.327	94.893	95.593	-0.057526					23	16	2	0	0	0	0.4196	1	10198	10198		21.96	0	1	301980			6924	14928;1829	4786	4792	8023	8023					0.06599588576546012
ELKNEKQHLI	10	Unmodified	_ELKNEKQHLI_					0	0	0		ENST00000366983.5_1_1:212792597-212792894:+|nuORF;ENST00000464547.5_1_1:212792437-212792894:+|nuORF;nc|ENSG00000162772|P18847-5|ATF3;ENSG00000162772|ENST00000341491|ATF3	ENST00000366983.5_1_1:212792597-212792894:+|nuORF	ENST00000366983.5_1_1:212792597-212792894:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.92242431640625	3	417.906705	1250.69829	-0.18596	-7.7716E-05	3.3932	0.001418	3.2072	0.0013403	417.90803347932484	105.98	0.57231	105.96	105.78	106.35	-0.025146					19	13	2	0	0	0	0.37624	1	11488	11488		45.022	24.992	1	256910			6925	5735	4787	4793	8024	8024					0.0829644648890735
ELKNIAERFAF	11	Unmodified	_ELKNIAERFAF_					0	0	0			REV__nc|ENSG00000097007|P00519-2|ABL1	REV__nc|ENSG00000097007|P00519-2|ABL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	445.6358947753906	3	446.578588	1336.71394	0.044088	1.9689E-05	-3.0446	-0.0013596	-3.0005	-0.0013399	446.9116718647727	38.235	0.54691	38.207	38.039	38.586	-0.027843					15	12	2	0	0	0	0.17521	1	2605	2605		22.562	1.7244	1	52503	+		6926	29733	4788	4794	8025	8025					0.059047330059456726
ELKNPPVLPL	10	Unmodified	_ELKNPPVLPL_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3403930664062	2	560.342249	1118.66995	-0.40673	-0.00022791	-3.2012	-0.0017938	-3.608	-0.0020217	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.64457	22	10431	10431;10439;10449;10460;10472;10484;10496;10507;10519;10531;10557;10579;10589;10599;10613;10636;10646;10658;10670;10694;10716;10767		47.657	17.891	1	60162000	+		6927	16404	4789	4795	8026;8027;8028;8029;8030;8031;8032;8033;8034;8035;8036;8037;8038;8039;8040;8041;8042;8043;8044;8045;8046;8047	8026					0.11535748579603933
ELKNPPVLPL	10	Unmodified	_ELKNPPVLPL_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.34033203125	2	560.342249	1118.66995	-1.1297	-0.00063301	-2.5217	-0.001413	-3.6514	-0.002046	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.54701	25	10950	10927;10938;10950;10962;10974;10986;10998;11010;11022;11034;11046;11058;11079;11103;11115;11127;11151;11163;11175;11187;11211;11223;11247;11273;11371		52.937	13.684	1	84412000	+		6928	16404	4789	4795	8048;8049;8050;8051;8052;8053;8054;8055;8056;8057;8058;8059;8060;8061;8062;8063;8064;8065;8066;8067;8068;8069;8070;8071;8072	8050					0.11535748579603933
ELKNPPVLPL	10	Unmodified	_ELKNPPVLPL_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3401489257812	2	560.342249	1118.66995	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.56	1	106.53	106.03	107.03	-0.025146								0	0	0	0.45132	1	11569	11569		31.53	5.9558	1		+		6929	16404	4789	4795	8073	8073					0.11535748579603933
ELKNPPVLPL	10	Unmodified	_ELKNPPVLPL_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3406982421875	2	560.342249	1118.66995	0.39666	0.00022227	-4.1426	-0.0023213	-3.7459	-0.002099	560.3399034928755	102.04	3.4939	102.24	101.58	105.08	0.19484					369	86	7	0	0	0	0.6116	33	11128	10687;10698;10710;10722;10734;10746;10758;10770;10782;10794;10806;10818;10836;10848;10860;10872;10886;10898;10910;10922;10934;10946;10958;10970;10994;11006;11036;11049;11074;11086;11098;11128;11140		49.442	16.629	1	135510000	+		6930	16404	4789	4795	8074;8075;8076;8077;8078;8079;8080;8081;8082;8083;8084;8085;8086;8087;8088;8089;8090;8091;8092;8093;8094;8095;8096;8097;8098;8099;8100;8101;8102;8103;8104;8105;8106	8105					0.11535748579603933
ELKNPPVLPL	10	Unmodified	_ELKNPPVLPL_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.34033203125	2	560.342249	1118.66995	-1.4184	-0.00079481	-2.3281	-0.0013045	-3.7465	-0.0020993	560.3408991920513	102.18	3.487	102.32	101.71	105.2	0.13569					387	86	7	0	0	0	0.70553	27	10663	10651;10663;10675;10687;10699;10711;10723;10735;10747;10759;10771;10783;10793;10806;10817;10829;10842;10854;10866;10878;10890;10902;10914;10948;11009;11022;11070		44.377	17.684	1	120110000	+		6931	16404	4789	4795	8107;8108;8109;8110;8111;8112;8113;8114;8115;8116;8117;8118;8119;8120;8121;8122;8123;8124;8125;8126;8127;8128;8129;8130;8131;8132;8133	8108					0.11535748579603933
ELKNPPVLPL	10	Unmodified	_ELKNPPVLPL_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.33935546875	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.6646	-0.00093273	-3.0831	-0.0017276	560.3412091508775	106.12	0.75266	106.18	105.94	106.69	0.053749					46	17	3	0	0	0	0.80179	1	11280	11280		39.253	4.1008	1	1449400	+		6932	16404	4789	4795	8134	8134					0.11535748579603933
ELKNPPVLPL	10	Unmodified	_ELKNPPVLPL_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3409423828125	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.80179	2	12094	12094;12358		39.253	2.8061	1	4071000	+		6933	16404	4789	4795	8135;8136	8135					0.11535748579603933
ELKNSGMD	8	Unmodified	_ELKNSGMD_					0	0	0			REV__ENSG00000122477|ENST00000370137|LRRC39	REV__ENSG00000122477|ENST00000370137|LRRC39	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2603454589844	2	447.205292	892.396032	0.59294	0.00026517	-4.1239	-0.0018442	-3.5309	-0.0015791	447.20333599873453	37.414	0.63292	37.9	37.577	38.21	0.48581					32	15	3	0	0	0	0.4196	1	2996	2996		15.642	5.9362	1	419420	+		6934	18497	4790	4796	8137	8137					-0.05447017521964881
ELKNTHLHK	9	Unmodified	_ELKNTHLHK_					0	0	0			REV__L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|157|3|sense	REV__L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|157|3|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3404541015625	2	560.317097	1118.61964	0.3958	0.00022177	3.9834	0.002232	4.3792	0.0024537	560.318459274628	102.02	0.92052	102.21	101.97	102.89	0.19483					42	22	3	0	0	0	0.20789	1	10818	10818		44.377	16.495	1	1087600	+		6935	29580	4791	4797	8138	8138					0.06507638974449037
ELKPERLQPR	10	Unmodified	_ELKPERLQPR_					0	0	0		nc|ENSG00000160460|Q9H254-3|SPTBN4;ENSG00000160460|ENST00000598249|SPTBN4	nc|ENSG00000160460|Q9H254-3|SPTBN4	nc|ENSG00000160460|Q9H254-3|SPTBN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3689575195312	2	633.369861	1264.72517	1.5976	0.0010119	-2.7562	-0.0017457	-1.1585	-0.00073377	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.86089	1	11681	11681		36.447	9.7538	1	10012000			6936	5590	4792	4798	8139	8139					0.1033955510006308
ELKPERLQPR	10	Unmodified	_ELKPERLQPR_					0	0	0		nc|ENSG00000160460|Q9H254-3|SPTBN4;ENSG00000160460|ENST00000598249|SPTBN4	nc|ENSG00000160460|Q9H254-3|SPTBN4	nc|ENSG00000160460|Q9H254-3|SPTBN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3692016601562	2	633.369861	1264.72517	2.3091	0.0014625	-3.4627	-0.0021932	-1.1537	-0.00073069	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.86549	1	11688	11688		31.53	7.0106	1	10333000			6937	5590	4792	4798	8140	8140					0.1033955510006308
ELKPQPMIKKA	11	Unmodified	_ELKPQPMIKKA_					0	0	0		ENSG00000108924|ENST00000226067|HLF;nc|ENSG00000108924|Q16534-2|HLF;ENST00000570962.1_1_17:53345105-53398237:+|nuORF	ENSG00000108924|ENST00000226067|HLF	ENSG00000108924|ENST00000226067|HLF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.882568359375	2	641.881216	1281.74788	-0.050098	-3.2157E-05	2.0215	0.0012976	1.9714	0.0012654	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.62614	1	10419	10419		41.427	12.277	1	3644700			6938	2439	4793	4799	8141	8141					0.11827438173349947
ELKPQPMIKKA	11	Unmodified	_ELKPQPMIKKA_					0	0	0		ENSG00000108924|ENST00000226067|HLF;nc|ENSG00000108924|Q16534-2|HLF;ENST00000570962.1_1_17:53345105-53398237:+|nuORF	ENSG00000108924|ENST00000226067|HLF	ENSG00000108924|ENST00000226067|HLF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8822021484375	2	641.881216	1281.74788	2.2004	0.0014124	-0.30032	-0.00019277	1.9001	0.0012196	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.61369	1	10619	10619		42.864	7.246	1	3624200			6939	2439	4793	4799	8142	8142					0.11827438173349947
ELKPQPMIKKA	11	Unmodified	_ELKPQPMIKKA_					0	0	0		ENSG00000108924|ENST00000226067|HLF;nc|ENSG00000108924|Q16534-2|HLF;ENST00000570962.1_1_17:53345105-53398237:+|nuORF	ENSG00000108924|ENST00000226067|HLF	ENSG00000108924|ENST00000226067|HLF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8824462890625	2	641.881216	1281.74788	1.5974	0.0010254	0.28164	0.00018078	1.8791	0.0012061	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.67778	1	10090	10090		35.152	3.6222	1	4266200			6940	2439	4793	4799	8143	8143					0.11827438173349947
ELKPSLLFV	9	Unmodified	_ELKPSLLFV_					0	0	0			REV__chr14:89412490-89453074|25|11.32|0.68|4.05|-|2|TE_info:AluSq2,AluSq2_dup45381,Alu,SINE,donor,+,89453074,89453223|FOXN3,None|2	REV__chr14:89412490-89453074|25|11.32|0.68|4.05|-|2|TE_info:AluSq2,AluSq2_dup45381,Alu,SINE,donor,+,89453074,89453223|FOXN3,None|2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.303466796875	2	523.318243	1044.62193	-1.539	-0.00080539	1.9293	0.0010097	0.39034	0.00020427	523.3171254158316	88.673	0.34091	88.845	88.741	89.082	0.17234					12	7	3	0	0	0	0.20789	1	8799	8799		19.997	0	1	69241	+		6941	15610	4794	4800	8144	8144					0.10140674659578508
ELKPVGVMA	9	Unmodified	_ELKPVGVMA_					0	0	0		ENSG00000113645|ENST00000265293|WWC1;nc|ENSG00000113645|Q8IX03-2|WWC1	ENSG00000113645|ENST00000265293|WWC1	ENSG00000113645|ENST00000265293|WWC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28753662109375	2	472.267696	942.520839	-1.7053	-0.00080535	2.6599	0.0012562	0.95459	0.00045082	472.26991207151383	95.119	0.24285	95.322	95.11	95.353	0.20242					12	5	3	0	0	0	0.20789	1	9668	9668		30.504	12.179	1	230400			6942	2736	4795	4801	8145	8145					0.04727899685224202
ELKQPLSLPSW	11	Unmodified	_ELKQPLSLPSW_					0	0	0		ENSG00000203867|ENST00000369519|RBM20	ENSG00000203867|ENST00000369519|RBM20	ENSG00000203867|ENST00000369519|RBM20	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	649.36376953125	2	649.36117	1296.70779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.981	1	65.105	64.605	65.605	0.12438								0	0	0	0.56276	1	5762	5762		31.53	1.2121	1				6943	8397	4796	4802	8146	8146					0.07130214774429078
ELKQRFPNIRL	11	Unmodified	_ELKQRFPNIRL_					0	0	0		ENSG00000179761|ENST00000323372|PIPOX;ENST00000580241.5_1_17:27280417-27383320:+|nuORF;ENST00000583215.5_1_17:27338116-27383320:+|nuORF	ENSG00000179761|ENST00000323372|PIPOX	ENSG00000179761|ENST00000323372|PIPOX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2862548828125	3	471.949016	1412.82522	1.8696	0.00088238	3.7398	0.001765	5.6094	0.0026474	471.95079991838713	105.05	0.63052	105.21	104.93	105.56	0.15583					36	16	3	0	0	0	0.77205	1	12781	12781		17.167	1.16	1	234370			6944	7291	4797	4803	8147	8147					0.1353179243390059
ELKQRLKH	8	Unmodified	_ELKQRLKH_					0	0	0			REV__ENSG00000130827|ENST00000369682|PLXNA3	REV__ENSG00000130827|ENST00000369682|PLXNA3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.3084716796875	2	526.322183	1050.62981	-0.21329	-0.00011226	4.1753	0.0021975	3.962	0.0020853	526.3241407384553	66.47	0.31687	66.498	66.311	66.628	0.028587					20	15	2	0	0	0	0.4196	1	6279	6279		6.7355	0	1	68273	+		6945	18914	4798	4804	8148	8148					0.10652246699714851
ELKQVQKKGG	10	Unmodified	_ELKQVQKKGG_					0	0	0			REV__ENSG00000078814|ENST00000262873|MYH7B	REV__ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.8348999023438	2	557.83258	1113.65061	0.10262	5.7246E-05	0.1219	6.8E-05	0.22452	0.00012525	557.832372630094	20.547	0.44965	20.477	20.266	20.715	-0.069735					37	19	3	0	0	0	0.82886	1	540	540		37.812	6.2817	1	74365	+		6946	16773	4799	4805	8149	8149					0.09832792288693781
ELKRAVKN	8	Unmodified	_ELKRAVKN_					0	0	0			REV__L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|130|3|sense	REV__L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|130|3|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773132324219	2	479.295633	956.576714	-0.82777	-0.00039675	-2.0638	-0.00098918	-2.8916	-0.0013859	479.2937757012074	83.863	0.43839	83.922	83.585	84.024	0.05925					12	9	2	0	0	0	0.4196	1	8411	8411		38.806	15.764	1	51997	+		6947	29576	4800	4806	8150	8150					0.09668868917037798
ELKRGQLAS	9	Unmodified	_ELKRGQLAS_					0	0	0			REV__ENST00000472200.1_1_3:136537665-136537851:+|nuORF	REV__ENST00000472200.1_1_3:136537665-136537851:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2901611328125	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.58668	1	9246	9246		47.657	0	1	9883700	+		6948	27255	4801	4807	8151	8151					0.06628261191804086
ELKRGQLAS	9	Unmodified	_ELKRGQLAS_					0	0	0			REV__ENST00000472200.1_1_3:136537665-136537851:+|nuORF	REV__ENST00000472200.1_1_3:136537665-136537851:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2900085449219	2	501.290548	1000.56654	-0.52378	-0.00026256	0.16738	8.3908E-05	-0.35639	-0.00017866	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.77696	1	8477	8477		31.53	0	1	2929300	+		6949	27255	4801	4807	8152	8152					0.06628261191804086
ELKRGQLAS	9	Unmodified	_ELKRGQLAS_					0	0	0			REV__ENST00000472200.1_1_3:136537665-136537851:+|nuORF	REV__ENST00000472200.1_1_3:136537665-136537851:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29046630859375	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.77696	1	10402	10402		31.53	2.3803	1	9038000	+		6950	27255	4801	4807	8153	8153					0.06628261191804086
ELKRIKRKLR	10	Unmodified	_ELKRIKRKLR_					0	0	0			REV__ENSG00000185608|ENST00000333130|MRPL40	REV__ENSG00000185608|ENST00000333130|MRPL40	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2727355957031	3	447.305134	1338.89357	-1.2902	-0.00057713	4.2961	0.0019217	3.0059	0.0013445	447.30634008525374	106.84	0.32508	106.98	106.74	107.06	0.14842					10	7	2	0	0	0	0.37624	1	11430	11430		14.086	3.9821	1	75492	+		6951	22777	4802	4808	8154	8154					0.23768081804405483
ELKRIKRKLR	10	Unmodified	_ELKRIKRKLR_					0	0	0			REV__ENSG00000185608|ENST00000333130|MRPL40	REV__ENSG00000185608|ENST00000333130|MRPL40	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.2730712890625	3	447.305134	1338.89357	0.74954	0.00033527	-3.1962	-0.0014297	-2.4466	-0.0010944	447.3035462047997	106.84	0.21651	106.93	106.78	106.99	0.091255					7	4	2	0	0	0	0.37624	1	11434	11434		9.6461	4.2332	1	63191	+		6952	22777	4802	4808	8155	8155					0.23768081804405483
ELKRKIVDPKQ	11	Unmodified	_ELKRKIVDPKQ_					0	0	0			REV__nc|ENSG00000130695|Q6P2H3-4|CEP85	REV__nc|ENSG00000130695|Q6P2H3-4|CEP85	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.94171142578125	3	451.945271	1352.81398	0.028854	1.304E-05	-4.4232	-0.0019991	-4.3944	-0.001986	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.74344	1	4868	4868		23.514	1.7339	1	513120	+		6953	18891	4803	4809	8156	8156					0.15168970339755106
ELKRKIVDPKQ	11	Unmodified	_ELKRKIVDPKQ_					0	0	0			REV__nc|ENSG00000130695|Q6P2H3-4|CEP85	REV__nc|ENSG00000130695|Q6P2H3-4|CEP85	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9436340332031	3	451.945271	1352.81398	-1.2917	-0.0005838	-3.0438	-0.0013756	-4.3355	-0.0019594	451.94377054874303	55.311	1.3656	55.375	54.704	56.07	0.063725					141	47	4	0	0	0	0.73237	1	4659	4659		25.98	2.6026	1	457030	+		6954	18891	4803	4809	8157	8157					0.15168970339755106
ELKRLFNLHL	10	Unmodified	_ELKRLFNLHL_					0	0	0		nc|ENSG00000058600|Q9NVU0-3|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;ENSG00000058600|ENST00000299853|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8822021484375	2	641.885147	1281.75574	-0.050098	-3.2157E-05	-4.1031	-0.0026337	-4.1532	-0.0026659	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.74274	1	10336	10336		42.396	2.338	1	3644700			6955	13880	4804	4810	8158	8158					0.12613333485137446
ELKRQITN	8	Unmodified	_ELKRQITN_					0	0	0			REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904968261719	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.91472	1	8522	8522		44.117	4.864	1	9566900	+		6956	18928	4805	4811	8159	8159					0.06628261191804086
ELKRSLAAAS	10	Unmodified	_ELKRSLAAAS_					0	0	0			REV__ENST00000360315.7_1_19:19617063-19617249:+|nuORF	REV__ENST00000360315.7_1_19:19617063-19617249:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.303466796875	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.8545	1	10615	10615		36.447	0	1	11944000	+		6957	25476	4806	4812	8160	8160					0.07224530363282611
ELKSAIFLSTI	11	Unmodified	_ELKSAIFLSTI_					0	0	0			REV__ENSG00000175305|ENST00000308108|CCNE2	REV__ENSG00000175305|ENST00000308108|CCNE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3544921875	2	611.358096	1220.70164	-0.25906	-0.00015838	-3.0986	-0.0018944	-3.3577	-0.0020528	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.60058	1	9340	9340		44.377	0	1	3360200	+		6958	22058	4807	4813	8161	8161					0.1001169654291516
ELKSAIFLSTI	11	Unmodified	_ELKSAIFLSTI_					0	0	0			REV__ENSG00000175305|ENST00000308108|CCNE2	REV__ENSG00000175305|ENST00000308108|CCNE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.353759765625	2	611.358096	1220.70164	-0.22744	-0.00013904	-2.3258	-0.0014219	-2.5533	-0.001561	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.67778	1	9501	9501		35.152	2.3396	1	8715400	+		6959	22058	4807	4813	8162	8162					0.1001169654291516
ELKSAIFLSTI	11	Unmodified	_ELKSAIFLSTI_					0	0	0			REV__ENSG00000175305|ENST00000308108|CCNE2	REV__ENSG00000175305|ENST00000308108|CCNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3543090820312	2	611.358096	1220.70164	-0.40504	-0.00024762	-2.2662	-0.0013854	-2.6712	-0.0016331	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.72106	1	9983	9983		28.081	1.3886	1	12417000	+		6960	22058	4807	4813	8163	8163					0.1001169654291516
ELKSRFPK	8	Unmodified	_ELKSRFPK_					0	0	0		ENSG00000155085|ENST00000424296|AK9	ENSG00000155085|ENST00000424296|AK9	ENSG00000155085|ENST00000424296|AK9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	502.8139343261719	2	502.798009	1003.58147	-0.4649	-0.00023375	-1.6014	-0.0008052	-2.0663	-0.001039	502.7977742867428	97.026	0.49079	97.257	97.041	97.532	0.23103					18	11	2	0	0	0	0.4196	1	10000	10000		35.618	0	1	338150			6961	5310	4808	4814	8164	8164					0.07981753059812036
ELKTKVELF	9	Unmodified	_ELKTKVELF_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8300170898438	2	553.826432	1105.63831	2.7249	0.0015091	3.9821	0.0022054	6.707	0.0037145	553.8284487577807	102.26	0.67956	102.56	102.22	102.9	0.29865					38	15	3	0	0	0	0.78536	1	12453	12453		29.15	7.1897	1	607180			6962	5149	4809	4815	8165	8165					0.08971755825655237
ELKVIGFLYR	10	Unmodified	_ELKVIGFLYR_					0	0	0		ENST00000298875.8_1_14:92628287-92628362:+|nuORF	ENST00000298875.8_1_14:92628287-92628362:+|nuORF	ENST00000298875.8_1_14:92628287-92628362:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3699951171875	2	619.368798	1236.72304	3.0782	0.0019065	1.4411	0.00089258	4.5193	0.0027991	619.8710459081657	101.29	0.9677	101.61	101.32	102.29	0.32511					61	26	3	0	0	0	0.86272	1	12345	12345		24.519	0.99649	1	2930100			6963	9775	4810	4816	8166	8166					0.11415126362294359
ELKVKIVKHAM	11	Unmodified	_ELKVKIVKHAM_					0	0	0			REV__ENST00000493702.5_1_1:242013727-242017913:+|nuORF	REV__ENST00000493702.5_1_1:242013727-242017913:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5979309082031	3	432.600447	1294.77951	-1.8325	-0.00079275	-3.3685	-0.0014572	-5.201	-0.00225	432.598847314963	107.12	1.3043	107.16	106.63	107.93	0.036118					117	31	6	0	0	0	0.76579	1	11373	11373		18.531	0	1	10726000	+		6964	27700	4811	4817	8167	8167					0.14391430927298643
ELKVPRPFQLI	11	Unmodified	_ELKVPRPFQLI_					0	0	0			REV__ENSG00000169967|ENST00000682094|MAP3K2	REV__ENSG00000169967|ENST00000682094|MAP3K2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	447.2731018066406	3	447.274729	1338.80236	-0.14506	-6.4881E-05	-3.8917	-0.0017406	-4.0367	-0.0018055	447.27291009171284	107.35	0.75623	107.31	106.86	107.62	-0.034401					76	17	5	0	0	0	0.67041	2	11692	11692;11704		36.318	9.5679	1	9872200	+		6965	21621	4812	4818	8168;8169	8168					0.14650773316429877
ELKVPRPFQLI	11	Unmodified	_ELKVPRPFQLI_					0	0	0			REV__ENSG00000169967|ENST00000682094|MAP3K2	REV__ENSG00000169967|ENST00000682094|MAP3K2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2731018066406	3	447.274729	1338.80236	-1.2893	-0.00057667	-3.0438	-0.0013614	-4.3331	-0.0019381	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.75121	1	11479	11479		21.78	0.74819	1	31263000	+		6966	21621	4812	4818	8170	8170					0.14650773316429877
ELKVPRPFQLI	11	Unmodified	_ELKVPRPFQLI_					0	0	0			REV__ENSG00000169967|ENST00000682094|MAP3K2	REV__ENSG00000169967|ENST00000682094|MAP3K2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2735900878906	3	447.274729	1338.80236	-1.2894	-0.00057671	-3.3316	-0.0014901	-4.621	-0.0020668	447.27316892355236	107.81	0.50114	107.95	107.57	108.07	0.13866					44	12	5	0	0	0	0.74405	1	11564	11564		23.378	0.81632	1	39114000	+		6967	21621	4812	4818	8171	8171					0.14650773316429877
ELKVPRPFQLI	11	Unmodified	_ELKVPRPFQLI_					0	0	0			REV__ENSG00000169967|ENST00000682094|MAP3K2	REV__ENSG00000169967|ENST00000682094|MAP3K2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.2730712890625	3	447.274729	1338.80236	-1.7854	-0.00079855	-2.3253	-0.0010401	-4.1107	-0.0018386	447.27362843006824	106.96	1.1721	107.02	106.47	107.64	0.053757					124	27	6	0	0	0	0.73277	2	11396	11384;11396		25.892	4.1113	1	15545000	+		6968	21621	4812	4818	8172;8173	8173					0.14650773316429877
ELKYDKQIDL	10	Unmodified	_ELKYDKQIDL_					0	0	0		ENSG00000145050|ENST00000528157|MANF;ENST00000482262.1_1_3:51425158-51426517:+|nuORF;ENST00000446668.5_1_3:51424348-51426517:+|nuORF;ENST00000470900.1_1_3:51423580-51426517:+|nuORF	ENSG00000145050|ENST00000528157|MANF	ENSG00000145050|ENST00000528157|MANF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.231201171875	3	422.230966	1263.67107	0.85489	0.00036096	-0.68161	-0.0002878	0.17328	7.3163E-05	422.2306179141909	33.441	0.79545	33.611	33.314	34.109	0.16971					47	18	4	0	0	0	0.4503	1	2405	2405		63.694	12.166	1	946230			6969	4747	4813	4819	8174	8174					0.04977918157851491
ELKYQLADIV	10	Unmodified	_ELKYQLADIV_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3326416015625	2	596.334621	1190.65469	-0.30561	-0.00018224	-2.5745	-0.0015353	-2.8801	-0.0017175	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.86587	1	9672	9672		29.17	1.0886	1	740920	+		6970	16877	4814	4820	8175	8175					0.06698836991745338
ELLAEILPP	9	Unmodified	_ELLAEILPP_					0	0	0		ENSG00000189139|ENST00000340446|FSCB	ENSG00000189139|ENST00000340446|FSCB	ENSG00000189139|ENST00000340446|FSCB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.79522705078125	2	497.794601	993.574648	-0.23858	-0.00011877	2.7689	0.0013784	2.5304	0.0012596	497.79577554464987	49.055	0.99467	48.961	48.599	49.594	-0.093178					54	23	3	0	0	0	0.78058	1	3753	3753		30.504	8.5438	1	401360			6971	7993	4815	4821	8176	8176					0.07760395388584129
ELLAFNKKL	9	Unmodified	_ELLAFNKKL_					0	0	0			REV__ENST00000506400.1_1_5:64906824-64920129:-|nuORF	REV__ENST00000506400.1_1_5:64906824-64920129:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.32666015625	2	538.329142	1074.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.2	1	103.33	102.83	103.83	0.12622								0	0	0	0.30416	1	10902	10902		29.15	1.2673	1		+		6972	18002	4816	4822	8177	8177					0.10939479408125408
ELLAGLAEP	9	Unmodified	_ELLAGLAEP_					0	0	0			REV__ENSG00000160685|ENST00000535420|ZBTB7B	REV__ENSG00000160685|ENST00000535420|ZBTB7B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3009338378906	2	456.755475	911.496398	0.27036	0.00012349	-3.2931	-0.0015042	-3.0228	-0.0013807	456.754575201162	46.392	0.19122	46.43	46.326	46.517	0.038181					6	4	2	0	0	0	0.20789	1	3398	3398		16.473	0	1	24914	+		6973	20730	4817	4823	8178	8178					0.03710962803336315
ELLAIDGSF	9	Unmodified	_ELLAIDGSF_					0	0	0			REV__ENST00000544702.5_1_12:7248989-7252531:-|nuORF	REV__ENST00000544702.5_1_12:7248989-7252531:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7500915527344	2	482.752933	963.491313	0.23822	0.000115	0.063807	3.0803E-05	0.30202	0.0001458	482.7528290628391	78.992	1.0627	79.402	79.142	80.205	0.4106					34	24	2	0	0	0	0.20789	1	9053	9053		53.351	10.877	1	119500	+		6974	28516	4818	4824	8179	8179					0.008106589407248066
ELLAIDGSF	9	Unmodified	_ELLAIDGSF_					0	0	0			REV__ENST00000544702.5_1_12:7248989-7252531:-|nuORF	REV__ENST00000544702.5_1_12:7248989-7252531:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7503662109375	2	482.752933	963.491313	-0.51926	-0.00025067	0.29847	0.00014409	-0.22079	-0.00010659	482.7529700446931	78.917	0.50891	79.467	79.276	79.785	0.54945					17	11	2	0	0	0	0.20789	1	9073	9073		45.952	20.502	1	139270	+		6975	28516	4818	4824	8180	8180					0.008106589407248066
ELLALAVRPG	10	Unmodified	_ELLALAVRPG_					0	0	0			REV__ENSG00000261150|ENST00000615648|EPPK1	REV__ENSG00000261150|ENST00000615648|EPPK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8182983398438	2	519.818941	1037.62333	0.62872	0.00032682	-1.9112	-0.00099348	-1.2825	-0.00066665	519.8178355105972	96.042	1.6829	96.446	95.572	97.255	0.40451					106	40	3	0	0	0	0.8608	1	11557	11557		34.173	3.6689	1	1896000	+		6976	23941	4819	4825	8181	8181					0.10602308748320866
ELLAQLLL	8	Unmodified	_ELLAQLLL_					0	0	0			REV__nc|ENSG00000114742|Q8TAF3-5|WDR48	REV__nc|ENSG00000114742|Q8TAF3-5|WDR48	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7895812988281	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.86791	1	3710	3710		28.254	2.8041	1	652510	+		6977	18062	4820	4826	8182	8182					0.10984716596760791
ELLAQSRPETA	11	Unmodified	_ELLAQSRPETA_					0	0	0			REV__ENST00000370803.7_1_X:133507308-133511628:+|nuORF	REV__ENST00000370803.7_1_X:133507308-133511628:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5531311035156	3	405.550698	1213.63027	0.31154	0.00012634	4.244	0.0017211	4.5555	0.0018475	405.55242896235654	28.737	3.0603	28.708	27.908	30.968	-0.029207					186	70	5	0	0	0	0.7144	1	1721	1721		20.315	0	1	9803100	+		6978	25668	4821	4827	8183	8183					0.031995768382330425
ELLAQWRRVQR	11	Unmodified	_ELLAQWRRVQR_					0	0	0			REV__nc|ENSG00000215127|Q58G82|SYT14P1	REV__nc|ENSG00000215127|Q58G82|SYT14P1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2856750488281	3	485.616148	1453.82661	-0.79018	-0.00038372	1.1946	0.00058013	0.40445	0.00019641	485.6167507360455	58.114	1.162	58.194	57.755	58.917	0.079643					74	54	2	0	0	0	0.17521	1	4937	4937		5.1424	0	1	203680	+		6979	30203	4822	4828	8184	8184					0.1178542652262422
ELLARPER	8	Unmodified	_ELLARPER_					0	0	0		ENST00000469716.1_1_7:95053779-95064326:-|nuORF;ENST00000471883.1_1_7:95047556-95064326:-|nuORF	ENST00000469716.1_1_7:95053779-95064326:-|nuORF	ENST00000469716.1_1_7:95053779-95064326:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.257568359375	2	492.285266	982.555979	-0.07867	-3.8728E-05	0.71347	0.00035123	0.6348	0.0003125	492.2856173630227	88.471	2.0698	88.54	87.271	89.341	0.068161					66	48	2	0	0	0	0.4196	1	8947	8947		25.574	13.367	1	75386			6980	12208	4823	4829	8185	8185					0.06400278537375925
ELLARPER	8	Unmodified	_ELLARPER_					0	0	0		ENST00000469716.1_1_7:95053779-95064326:-|nuORF;ENST00000471883.1_1_7:95047556-95064326:-|nuORF	ENST00000469716.1_1_7:95053779-95064326:-|nuORF	ENST00000469716.1_1_7:95053779-95064326:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	492.285266	982.555979	-0.96554	-0.00047532	1.6301	0.00080249	0.66459	0.00032717	492.2861096225098	88.677	2.1833	88.677	87.683	89.866	0	0.1261	0.00026103	NaN	25.574	77	50	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78652			6981	12208	4823	4829							0.06400278537375925
ELLARPER	8	Unmodified	_ELLARPER_					0	0	0		ENST00000469716.1_1_7:95053779-95064326:-|nuORF;ENST00000471883.1_1_7:95047556-95064326:-|nuORF	ENST00000469716.1_1_7:95053779-95064326:-|nuORF	ENST00000469716.1_1_7:95053779-95064326:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	492.285266	982.555979	-0.63563	-0.00031291	0.83534	0.00041123	0.19971	9.8314E-05	492.2857469707395	88.277	1.8352	88.484	87.548	89.383	0.20661	-0.067852	-0.00052149	NaN	25.574	58	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95071			6982	12208	4823	4829							0.06400278537375925
ELLARPER	8	Unmodified	_ELLARPER_					0	0	0		ENST00000469716.1_1_7:95053779-95064326:-|nuORF;ENST00000471883.1_1_7:95047556-95064326:-|nuORF	ENST00000469716.1_1_7:95053779-95064326:-|nuORF	ENST00000469716.1_1_7:95053779-95064326:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	492.285266	982.555979	-1.6399	-0.00080732	2.0539	0.0010111	0.41395	0.00020378	492.2863198799722	88.336	1.645	88.505	87.867	89.512	0.16923	-0.046427	0.00067827	NaN	25.574	60	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89019			6983	12208	4823	4829							0.06400278537375925
ELLDEAFEL	9	Unmodified	_ELLDEAFEL_					0	0	0		ENST00000553112.5_1_12:113834968-113841579:-|nuORF;ENSG00000135094|ENST00000257549|SDS	ENST00000553112.5_1_12:113834968-113841579:-|nuORF	ENST00000553112.5_1_12:113834968-113841579:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.76904296875	2	539.76878	1077.52301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.816	1	78.222	77.722	78.722	0.40531								0	0	0	0.05586	1	8866	8866		84.916	10.66	1				6984	3983	4824	4830	8186	8186					-0.01265393095991385
ELLDVDLVCVY	11	Unmodified	_ELLDVDLVCVY_					0	0	0			REV__ENSG00000110046|ENST00000377264|ATG2A	REV__ENSG00000110046|ENST00000377264|ATG2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.8241577148438	2	640.825772	1279.63699	0.070276	4.5035E-05	-2.6542	-0.0017008	-2.5839	-0.0016558	640.8240227864138	90.462	2.2246	90.933	90.485	92.71	0.47068					171	53	6	0	0	0	0.45916	1	10812	10812		54.776	13.998	1	24762000	+		6985	17789	4825	4831	8187	8187					0.008357536745961625
ELLEHKKQLK	10	Unmodified	_ELLEHKKQLK_					0	0	0			REV__ENST00000526262.5_1_11:70189825-70228249:+|nuORF	REV__ENST00000526262.5_1_11:70189825-70228249:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5929260253906	3	422.590717	1264.75032	0.34868	0.00014735	4.1113	0.0017374	4.4599	0.0018847	422.5923689571847	58.01	1.1959	58.12	57.495	58.691	0.11027					112	57	3	0	0	0	0.86698	1	4929	4929		28.081	2.1898	1	286690	+		6986	18958	4826	4832	8188	8188					0.12853609902640528
ELLEKLVLY	9	Unmodified	_ELLEKLVLY_					0	0	0		nc|ENSG00000174840|Q6L8Q7-2|PDE12;ENSG00000174840|ENST00000311180|PDE12	nc|ENSG00000174840|Q6L8Q7-2|PDE12	nc|ENSG00000174840|Q6L8Q7-2|PDE12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3403930664062	2	560.336633	1118.65871	3.1377	0.0017581	3.0866	0.0017295	6.2243	0.0034877	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.77546	1	11392	11392		31.955	5.2619	1	83033000			6987	6968	4827	4833	8189	8189					0.10412926485469143
ELLELAPQ	8	Unmodified	_ELLELAPQ_					0	0	0			REV__ENST00000447814.1_2_2:95830931-95831156:-|nuORF	REV__ENST00000447814.1_2_2:95830931-95831156:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30072021484375	2	456.755475	911.496398	-1.6922	-0.00077291	4.0937	0.0018698	2.4015	0.0010969	456.7572168081334	51.974	0.35862	51.974	51.698	52.057	0					11	8	2	0	0	0	0.4196	1	4235	4235		17.365	0	1	42295	+		6988	26828	4828	4834	8190	8190					0.03710962803336315
ELLELLVA	8	Unmodified	_ELLELLVA_					0	0	0			REV__ENSG00000240694|ENST00000522362|PNMA2	REV__ENSG00000240694|ENST00000522362|PNMA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.8852233886719	2	450.276044	898.537535	1.3493	0.00060757	-3.7257	-0.0016776	-2.3764	-0.00107	450.2742109009714	117.75	0.28184	117.72	117.52	117.8	-0.030861					23	13	2	0	0	0	0.4196	1	14046	14046		21.702	0	1	27901	+		6989	23813	4829	4835	8191	8191					0.08420723842812095
ELLELVLA	8	Unmodified	_ELLELVLA_					0	0	0			REV__ENSG00000132382|ENST00000254718|MYBBP1A	REV__ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.27362060546875	2	450.276044	898.537535	-1.7762	-0.00079979	-1.1363	-0.00051165	-2.9125	-0.0013114	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.86288	1	12340	12340		26.796	0	1	2494900	+		6990	18999	4830	4836	8192	8192					0.08420723842800726
ELLEPLLLLL	10	Unmodified	_ELLEPLLLLL_					0	0	0			REV__ENST00000381346.8_1_14:68144805-68144865:-|nuORF	REV__ENST00000381346.8_1_14:68144805-68144865:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.376708984375	2	583.375758	1164.73696	-1.1894	-0.00069389	2.8963	0.0016896	1.7068	0.00099573	583.3771702968781	45.008	2.1187	45.004	44.165	46.284	-0.0041618					113	49	3	0	0	0	0.85939	1	3561	3561		23.042	0	1	1120500	+		6991	25964	4831	4837	8193	8193					0.16118359070719634
ELLEPTVL	8	Unmodified	_ELLEPTVL_					0	0	0			REV__ENST00000528976.1_1_11:119180930-119182089:-|nuORF	REV__ENST00000528976.1_1_11:119180930-119182089:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2628173828125	2	457.265676	912.516799	-1.0543	-0.00048207	-1.5022	-0.00068689	-2.5564	-0.001169	457.264828131541	95.464	1.1692	95.464	95.008	96.177	0					62	26	3	0	0	0	0.86791	1	9507	9507		28.254	0	1	518470	+		6992	16730	4832	4838	8194	8194					0.05704133463132166
ELLETLGMMD	10	Unmodified	_ELLETLGMMD_					0	0	0		nc|ENSG00000164338|Q8TED0-2|UTP15;nc|ENSG00000164338|Q8TED0-3|UTP15;ENSG00000164338|ENST00000296792|UTP15	nc|ENSG00000164338|Q8TED0-2|UTP15	nc|ENSG00000164338|Q8TED0-2|UTP15	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2905883789062	2	576.269775	1150.525	-0.32447	-0.00018698	-2.2986	-0.0013246	-2.623	-0.0015116	576.2685795308387	58.297	0.57499	58.85	58.597	59.172	0.55323					26	13	3	0	0	0	0.37624	1	6115	6115		40.778	34.119	1	428510			6993	5959	4833	4839	8195	8195					-0.04424423674049649
ELLFKFVTT	9	Unmodified	_ELLFKFVTT_					0	0	0			REV__nc|ENSG00000168016|O15050|TRANK1	REV__nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.3187255859375	2	549.3157	1096.61685	-0.48303	-0.00026534	4.2887	0.0023558	3.8056	0.0020905	549.3179926126767	101.27	2.2263	101.27	100.73	102.96	0					128	54	4	0	0	0	0.7932	1	10365	10365		24.519	7.1542	1	1196600	+		6994	21451	4834	4840	8196	8196					0.07240370796944262
ELLFKFVTT	9	Unmodified	_ELLFKFVTT_					0	0	0			REV__nc|ENSG00000168016|O15050|TRANK1	REV__nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.3193359375	2	549.3157	1096.61685	0.88935	0.00048854	3.0878	0.0016962	3.9772	0.0021847	549.3172828747412	100.61	0.88557	100.91	100.53	101.41	0.2999					58	21	3	0	0	0	0.7932	1	12194	12194		26.693	0	1	409320	+		6995	21451	4834	4840	8197	8197					0.07240370796944262
ELLFKRDYII	10	Unmodified	_ELLFKRDYII_					0	0	0			REV__ENST00000532219.5_3_5:139921832-139928844:+|nuORF	REV__ENST00000532219.5_3_5:139921832-139928844:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2558898925781	3	437.255334	1308.74417	0.72446	0.00031677	3.8859	0.0016991	4.6103	0.0020159	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.86621	1	10199	10199		26.063	3.5018	1	670840	+		6996	23837	4835	4841	8198	8198					0.10215091671148002
ELLFKVVEV	9	Unmodified	_ELLFKVVEV_					0	0	0			REV__ENSG00000115419|ENST00000320717|GLS	REV__ENSG00000115419|ENST00000320717|GLS	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.326416015625	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.33	1	114.3	113.8	114.8	-0.024452								0	0	0	0.31117	1	12665	12665		26.693	2.4902	1		+		6997	18118	4836	4842	8199	8199					0.09816657313990618
ELLFLKSTF	9	Unmodified	_ELLFLKSTF_					0	0	0			REV__ENSG00000128915|ENST00000261520|ICE2	REV__ENSG00000128915|ENST00000261520|ICE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.319091796875	2	549.3157	1096.61685	-0.54476	-0.00029924	4.1359	0.0022719	3.5911	0.0019727	549.3179138519522	101.15	1.9875	101.19	100.7	102.69	0.031036					127	47	4	0	0	0	0.76255	1	10846	10846		35.618	1.4457	1	2171100	+		6998	18799	4837	4843	8200	8200					0.07240370796944262
ELLGNEPK	8	Unmodified	_ELLGNEPK_					0	0	0			REV__ENSG00000184500|ENST00000394236|PROS1	REV__ENSG00000184500|ENST00000394236|PROS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.76055908203125	2	450.245275	898.475997	-0.25287	-0.00011386	-1.5443	-0.00069529	-1.7971	-0.00080915	450.2428424662939	36.831	0.12246	37.112	37.011	37.134	0.28173					4	2	2	0	0	0	0.4196	1	2906	2906		31.955	15.482	1	39437	+		6999	22687	4838	4844	8201	8201					0.02269792143522409
ELLGRGGNF	9	Unmodified	_ELLGRGGNF_					0	0	0			REV__ENSG00000138081|ENST00000403359|FBXO11	REV__ENSG00000138081|ENST00000403359|FBXO11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.7559814453125	2	481.756341	961.498129	-0.84661	-0.00040786	2.2648	0.0010911	1.4182	0.00068324	481.7567676793475	57.439	0.74512	57.519	57.249	57.994	0.079643					68	38	3	0	0	0	0.78058	1	4871	4871		30.504	3.7075	1	328760	+		7000	19438	4839	4845	8202	8202					0.01584016611957395
ELLHRRLESL	10	Unmodified	_ELLHRRLESL_					0	0	0		ENSG00000173013|ENST00000310085|CCDC96	ENSG00000173013|ENST00000310085|CCDC96	ENSG00000173013|ENST00000310085|CCDC96	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5815734863281	3	422.582333	1264.72517	2.2204	0.0009383	-3.0442	-0.0012864	-0.82378	-0.00034811	422.58094622121547	97.769	3.2395	97.714	96.802	100.04	-0.055542					208	75	4	0	0	0	0.81117	2	10541	10518;10541		38.754	11.706	1	525770			7001	6817	4840	4846	8203;8204	8204					0.1033955510006308
ELLHRRLLAS	10	Unmodified	_ELLHRRLLAS_					0	0	0			REV__ENSG00000205593|ENST00000413817|DENND6B	REV__ENSG00000205593|ENST00000413817|DENND6B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.36767578125	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.7	1	117.73	117.23	118.23	0.026466								0	0	0	0.45132	1	12938	12938		14.865	1.4108	1		+		7002	23566	4841	4847	8205	8205					0.12459876308275852
ELLKKLPDLER	11	Unmodified	_ELLKKLPDLER_					0	0	0		nc|ENSG00000116062|P52701-4|MSH6;nc|ENSG00000116062|P52701-3|MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6	nc|ENSG00000116062|P52701-4|MSH6	nc|ENSG00000116062|P52701-4|MSH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9434814453125	3	451.941527	1352.80275	0.028854	1.304E-05	3.862	0.0017454	3.8909	0.0017584	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.74672	1	5013	5013		22.781	2.4664	1	513120			7003	2896	4842	4848	8206	8206					0.1404614824557484
ELLKKTSG	8	Unmodified	_ELLKKTSG_					0	0	0			REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|106|3|sense	REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|106|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2657775878906	2	438.263468	874.512382	-1.5666	-0.00068658	1.4769	0.00064725	-0.089725	-3.9323E-05	438.2640033133023	45.783	1.2838	45.798	45.032	46.315	0.015511					49	34	2	0	0	0	0.87064	1	3339	3339		29.15	0.89528	1	101570	+		7004	29488	4843	4849	8207	8207					0.07010669040244011
ELLKMRTK	8	Unmodified	_ELLKMRTK_					0	0	0			REV__ENSG00000174145|ENST00000309447|NWD2	REV__ENSG00000174145|ENST00000309447|NWD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.240478515625	2	509.807519	1017.60049	0.041816	2.1318E-05	-3.7598	-0.0019168	-3.718	-0.0018955	509.80541163100645	38.465	0.49489	38.987	38.75	39.245	0.52236					26	11	3	0	0	0	0.4196	1	3148	3148		10.866	0	1	209930	+		7005	21975	4844	4850	8208	8208					0.09238966359203005
ELLKRPIHK	9	Unmodified	_ELLKRPIHK_					0	0	0			REV__L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	REV__L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3634033203125	2	567.361308	1132.70806	0.39672	0.00022508	3.6187	0.0020531	4.0154	0.0022782	567.363221347754	44.24	2.8558	44.249	42.808	45.664	0.0084534					165	70	4	0	0	0	0.7932	1	3065	3065		26.693	1.1189	1	1167000	+		7006	29518	4845	4851	8209	8209					0.1470167928491719
ELLKTKTLKR	10	Unmodified	_ELLKTKTLKR_					0	0	0			REV__ENST00000380701.7_1_9:15784633-15846724:+|nuORF	REV__ENST00000380701.7_1_9:15784633-15846724:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.4039916992188	2	615.40063	1228.78671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.796	1	42.746	42.246	43.246	-0.050308								0	0	0	0.45132	1	2901	2901		23.523	1.8369	1		+		7007	25951	4846	4852	8210	8210					0.18146486799355444
ELLKVLAS	8	Unmodified	_ELLKVLAS_					0	0	0		chr1:156701013-156705377|19|44.53|0.33|7.07|-|2|None,CRABP2|1	chr1:156701013-156705377|19|44.53|0.33|7.07|-|2|None,CRABP2|1	chr1:156701013-156705377|19|44.53|0.33|7.07|-|2|None,CRABP2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77490234375	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.82658	1	9260	9260		21.96	0	1	13819000			7008	25	4847	4853	8211	8211					0.0969614356265538
ELLLHKRL	8	Unmodified	_ELLLHKRL_					0	0	0		ENST00000404625.5_1_7:22766799-22767201:+|nuORF	ENST00000404625.5_1_7:22766799-22767201:+|nuORF	ENST00000404625.5_1_7:22766799-22767201:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.814453125	2	511.329476	1020.6444	0.22414	0.00011461	-1.9064	-0.0009748	-1.6823	-0.00086019	511.32844218310265	78.537	1.0564	78.948	78.51	79.566	0.41059					44	24	2	0	0	0	0.4196	1	9035	9035		25.45	0	1	287430			7009	11259	4848	4854	8212	8212					0.13490318847846083
ELLLHRVF	8	Unmodified	_ELLLHRVF_					0	0	0		ENST00000258399.7_1_2:219427411-219427504:-|nuORF	ENST00000258399.7_1_2:219427411-219427504:-|nuORF	ENST00000258399.7_1_2:219427411-219427504:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8078002929688	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.87922	1	4665	4665		31.955	6.5047	1	771120			7010	9368	4849	4855	8213	8213					0.09042343439477918
ELLLIVSP	8	Unmodified	_ELLLIVSP_					0	0	0			REV__ENSG00000171827|ENST00000330173|ZNF570	REV__ENSG00000171827|ENST00000330173|ZNF570	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7879943847656	2	442.278586	882.54262	-1.2431	-0.00054978	-2.6134	-0.0011559	-3.8565	-0.0017056	442.27702285421253	39.135	1.1951	39.088	38.511	39.706	-0.047005					48	27	3	0	0	0	0.4196	1	2863	2863		17.365	0	1	83884	+		7011	21775	4850	4856	8214	8214					0.09665027705420925
ELLLKDITL	9	Unmodified	_ELLLKDITL_					0	0	0			REV__ENSG00000110777|ENST00000393067|POU2AF1	REV__ENSG00000110777|ENST00000393067|POU2AF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.3058471679688	2	529.328808	1056.64306	1.2635	0.00066882	2.542	0.0013455	3.8055	0.0020144	529.3304936916832	34.091	0.69975	34.396	34.035	34.735	0.30494					23	16	2	0	0	0	0.20789	1	2511	2511		21.686	1.689	1	248320	+		7012	17831	4851	4857	8215	8215					0.11700639968421456
ELLLLQVV	8	Unmodified	_ELLLLQVV_					0	0	0		nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6;nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-5|MARCHF6	nc|ENSG00000145495|O60337-5|MARCHF6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80072021484375	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.83646	1	3403	3403		12.207	0.69583	1	279560			7013	4773	4852	4858	8216	8216					0.11905003113804469
ELLLLVCFL	9	Unmodified	_ELLLLVCFL_					0	0	0			REV__ENST00000437743.1_1_7:64254823-64274514:+|nuORF	REV__ENST00000437743.1_1_7:64254823-64274514:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.81689453125	2	531.817021	1061.61949	0.70533	0.00037511	-1.0774	-0.00057299	-0.37209	-0.00019788	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.7932	1	8600	8600		26.796	1.3459	1	1163300	+		7014	26713	4853	4859	8217	8217					0.09114502930242452
ELLLLVCFL	9	Unmodified	_ELLLLVCFL_					0	0	0			REV__ENST00000437743.1_1_7:64254823-64274514:+|nuORF	REV__ENST00000437743.1_1_7:64254823-64274514:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8169555664062	2	531.817021	1061.61949	-1.264	-0.00067223	1.0817	0.00057524	-0.18237	-9.6987E-05	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.7932	1	10452	10452		26.796	1.222	1	4586300	+		7015	26713	4853	4859	8218	8218					0.09114502930242452
ELLLPMLSY	9	Unmodified	_ELLLPMLSY_					0	0	0			REV__ENST00000481360.1_1_10:120454563-120467024:-|nuORF	REV__ENST00000481360.1_1_10:120454563-120467024:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.7453002929688	2	539.796286	1077.57802	0.00088096	4.7554E-07	-2.6101	-0.0014089	-2.6092	-0.0014085	539.7943430743607	54.77	0.50503	55.177	54.864	55.369	0.40663					14	11	2	0	0	0	0.20789	1	5605	5605		53.351	0	1	100050	+		7016	20277	4854	4860	8219	8219					0.042333221709441204
ELLLQQRRPL	10	Unmodified	_ELLLQQRRPL_					0	0	0			REV__nc|ENSG00000157927|Q96JH8-1|RADIL	REV__nc|ENSG00000157927|Q96JH8-1|RADIL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5921325683594	3	422.594461	1264.76155	-0.015219	-6.4315E-06	-4.1372	-0.0017484	-4.1524	-0.0017548	422.5925783921211	58.971	2.9474	58.94	58.062	61.01	-0.030884					151	84	3	0	0	0	0.86802	1	5512	5512		27.047	7.0168	1	166800	+		7017	20573	4855	4861	8220	8220					0.13976431996798055
ELLLQQRRPL	10	Unmodified	_ELLLQQRRPL_					0	0	0			REV__nc|ENSG00000157927|Q96JH8-1|RADIL	REV__nc|ENSG00000157927|Q96JH8-1|RADIL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.59228515625	3	422.594461	1264.76155	-1.8214	-0.00076972	-2.4208	-0.001023	-4.2423	-0.0017928	422.5933529014654	49.394	1.9735	49.419	48.567	50.541	0.025574					182	52	4	0	0	0	0.85633	1	3764	3764		21.686	4.519	1	2033600	+		7018	20573	4855	4861	8221	8221					0.13976431996798055
ELLLQQRRPL	10	Unmodified	_ELLLQQRRPL_					0	0	0			REV__nc|ENSG00000157927|Q96JH8-1|RADIL	REV__nc|ENSG00000157927|Q96JH8-1|RADIL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5928955078125	3	422.594461	1264.76155	-1.8117	-0.0007656	-1.6807	-0.00071027	-3.4924	-0.0014759	422.59357864263933	54.504	2.542	54.559	53.757	56.299	0.055611					235	90	4	0	0	0	0.85259	1	4545	4545		20.03	0	1	1177200	+		7019	20573	4855	4861	8222	8222					0.13976431996798055
ELLLQQRRPL	10	Unmodified	_ELLLQQRRPL_					0	0	0			REV__nc|ENSG00000157927|Q96JH8-1|RADIL	REV__nc|ENSG00000157927|Q96JH8-1|RADIL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.59173583984375	3	422.594461	1264.76155	-0.63509	-0.00026839	-3.8418	-0.0016235	-4.4769	-0.0018919	422.59269266623227	53.26	1.1275	53.198	52.52	53.647	-0.062061					70	30	3	0	0	0	0.86225	1	4325	4325		32.751	3.5805	1	161760	+		7020	20573	4855	4861	8223	8223					0.13976431996798055
ELLLVHRF	8	Unmodified	_ELLLVHRF_					0	0	0		nc|ENSG00000198488|Q6ZMB0-2|B3GNT6;ENSG00000198488|ENST00000622824|B3GNT6;nc|ENSG00000198488|Q6ZMB0-3|B3GNT6	nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.80859375	2	513.808377	1025.6022	-0.65666	-0.0003374	1.6077	0.00082607	0.95108	0.00048867	513.8090545546751	47.78	2.1477	48.249	47.733	49.881	0.46941					113	53	4	0	0	0	0.89962	1	4551	4551		38.806	4.6336	1	3097000			7021	8278	4856	4862	8224	8224					0.09042343439477918
ELLMTPVPF	9	Unmodified	_ELLMTPVPF_					0	0	0		nc|ENSG00000110881|P78348-1|ASIC1	nc|ENSG00000110881|P78348-1|ASIC1	nc|ENSG00000110881|P78348-1|ASIC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3038940429688	2	523.783179	1045.5518	-0.16459	-8.6208E-05	0.34361	0.00017998	0.17903	9.3772E-05	523.7833449163357	90.491	1.8694	90.708	89.308	91.178	0.21737					91	44	3	0	0	0	0.20789	1	9104	9104		30.504	7.4612	1	147450			7022	14842	4857	4863	8225	8225					0.030850529994495446
ELLPILVSVV	10	Unmodified	_ELLPILVSVV_					0	0	0			REV__ENSG00000112159|ENST00000369393|MDN1	REV__ENSG00000112159|ENST00000369393|MDN1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.34814453125	2	541.347	1080.67945	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.945	1	55.908	55.408	56.408	-0.036827								0	0	0	0.45132	1	4710	4710		21.96	2.5999	1		+		7023	17920	4858	4864	8226	8226					0.1423351686512433
ELLPKPLRWGG	11	Unmodified	_ELLPKPLRWGG_					0	0	0		ENST00000503337.1_1_17:48757061-48757208:+|nuORF	ENST00000503337.1_1_17:48757061-48757208:+|nuORF	ENST00000503337.1_1_17:48757061-48757208:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.58154296875	3	422.583674	1264.72919	-1.0345	-0.00043717	-2.9464	-0.0012451	-3.9809	-0.0016823	422.582401446262	98.086	2.0202	98.086	97.162	99.182	0					111	48	3	0	0	0	0.76322	1	9883	9883		17.167	5.7121	1	144500			7024	12878	4859	4865	8227	8227					0.1074164459378153
ELLQAPLI	8	Unmodified	_ELLQAPLI_					0	0	0			REV__ENSG00000133812|ENST00000256190|SBF2	REV__ENSG00000133812|ENST00000256190|SBF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.777099609375	2	448.776211	895.537869	-1.2107	-0.00054331	4.2721	0.0019172	3.0615	0.0013739	448.7780530522161	71.86	0.93866	71.94	71.575	72.514	0.080025					46	35	2	0	0	0	0.82464	1	6537	6537		21.702	0	1	128990	+		7025	19097	4860	4866	8228	8228					0.08592143562668753
ELLRDPAL	8	Unmodified	_ELLRDPAL_					0	0	0		ENSG00000132518|ENST00000254854|GUCY2D	ENSG00000132518|ENST00000254854|GUCY2D	ENSG00000132518|ENST00000254854|GUCY2D	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.7690734863281	2	463.768917	925.523281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.807	1	67.807	67.307	68.307	0								0	0	0	0.29245	1	6002	6002		30.504	1.3541	1				7026	3804	4861	4867	8229	8229					0.057540714145034144
ELLRFLRYRID	11	Unmodified	_ELLRFLRYRID_					0	0	0			REV__ENST00000511235.1_1_5:134303666-134331399:+|nuORF	REV__ENST00000511235.1_1_5:134303666-134331399:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.6221008300781	3	498.624421	1492.85143	-1.9133	-0.00095401	-0.93668	-0.00046705	-2.85	-0.0014211	498.62386245575794	21.686	1.0367	21.686	21.107	22.144	0					71	45	2	0	0	0	0.77205	1	575	575		17.167	4.2093	1	49754	+		7027	20313	4862	4868	8230	8230					0.12472061605353701
ELLRLPRRLQR	11	Unmodified	_ELLRLPRRLQR_					0	0	0		ENST00000423686.1_1_13:52763934-52768509:-|nuORF	ENST00000423686.1_1_13:52763934-52768509:-|nuORF	ENST00000423686.1_1_13:52763934-52768509:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.97479248046875	3	483.975676	1448.9052	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.434	1	16.482	15.982	16.982	0.047804								0	0	0	0.56276	1	152	152		21.78	2.5177	1				7028	11501	4863	4869	8231	8231					0.1987027882773873
ELLRNSCR	8	Unmodified	_ELLRNSCR_					0	0	0			REV__ENST00000523483.5_2_8:59490700-59490754:+|nuORF	REV__ENST00000523483.5_2_8:59490700-59490754:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.7611999511719	2	495.761101	989.507648	-1.9425	-0.00096301	-0.60338	-0.00029913	-2.5459	-0.0012621	495.7602537576442	19.302	1.1114	19.302	18.834	19.945	0					76	43	2	0	0	0	0.88601	1	434	434		34.173	0	1	56551	+		7029	28140	4864	4870	8232	8232					0.01247461625825963
ELLRRIRPV	9	Unmodified	_ELLRRIRPV_					0	0	0			REV__nc|ENSG00000179168|Q86UU5-3|GGN	REV__nc|ENSG00000179168|Q86UU5-3|GGN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3694458007812	2	576.372207	1150.72986	-0.74313	-0.00042832	-4.0021	-0.0023067	-4.7452	-0.002735	576.3696767962949	37.867	1.5412	38.18	37.746	39.287	0.31312					100	38	4	0	0	0	0.7932	1	3119	3119		21.96	1.9631	1	2629900	+		7030	22322	4865	4871	8233	8233					0.1605248403348014
ELLRRLFV	8	Unmodified	_ELLRRLFV_					0	0	0			REV__ENSG00000103335|ENST00000301015|PIEZO1	REV__ENSG00000103335|ENST00000301015|PIEZO1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.303466796875	2	523.329476	1044.6444	-1.539	-0.00080542	1.0834	0.00056699	-0.45562	-0.00023844	523.3306639966222	88.961	0.77571	89.133	88.783	89.559	0.17234					19	17	2	0	0	0	0.4196	1	8799	8799		12.207	0	1	56478	+		7031	17405	4866	4872	8234	8234					0.12386318847848088
ELLRRTLQH	9	Unmodified	_ELLRRTLQH_					0	0	0			REV__ENSG00000179409|ENST00000319004|GEMIN4	REV__ENSG00000179409|ENST00000319004|GEMIN4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.3771362304688	2	583.343646	1164.67274	-2.0419	-0.0011911	0.58654	0.00034215	-1.4554	-0.00084897	583.3445912905022	41.557	0.36848	42.191	42.023	42.392	0.6339					15	9	2	0	0	0	0.20789	1	3673	3673		42.396	1.618	1	503770	+		7032	22337	4867	4873	8235	8235					0.09699016757144818
ELLRVMPAVH	10	Unmodified	_ELLRVMPAVH_					0	0	0			REV__nc|ENSG00000125731|Q9BRG2-2|SH2D3A	REV__nc|ENSG00000125731|Q9BRG2-2|SH2D3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.8329467773438	2	582.831526	1163.6485	0.71631	0.00041749	1.2981	0.00075659	2.0144	0.0011741	582.8322944715994	93.943	3.3707	94.171	93.279	96.65	0.22863					214	80	3	0	0	0	0.86218	1	9625	9625		32.812	0	1	862210	+		7033	18662	4868	4874	8236	8236					0.07322040279245812
ELLSFFFL	8	Unmodified	_ELLSFFFL_					0	0	0			REV__ENST00000527932.1_1_1:46080644-46081380:+|nuORF	REV__ENST00000527932.1_1_1:46080644-46081380:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2799987792969	2	508.278586	1014.54262	0.70176	0.00035669	2.5406	0.0012914	3.2424	0.001648	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.86791	1	8841	8841		28.254	0.17279	1	1954800	+		7034	28239	4869	4875	8237	8237					0.03593027705437635
ELLSIIEVE	9	Unmodified	_ELLSIIEVE_					0	0	0			REV__ENSG00000182606|ENST00000327628|TRAK1	REV__ENSG00000182606|ENST00000327628|TRAK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7935791015625	2	522.794798	1043.57504	-0.1263	-6.603E-05	-3.4576	-0.0018076	-3.5839	-0.0018736	522.7933088614702	27.974	0.56175	27.877	27.532	28.094	-0.096947					24	12	3	0	0	0	0.72402	1	1657	1657		38.806	4.6336	1	146990	+		7035	22534	4870	4876	8238	8238					0.05499770317783259
ELLSIIEVE	9	Unmodified	_ELLSIIEVE_					0	0	0			REV__ENSG00000182606|ENST00000327628|TRAK1	REV__ENSG00000182606|ENST00000327628|TRAK1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	522.794798	1043.57504	1.1627	0.00060784	-4.5282	-0.0023673	-3.3655	-0.0017595	522.7926349976308	28.085	0.58061	27.831	27.543	28.123	-0.25465	-0.023367	-0.0002982	NaN	38.806	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111480	+		7036	22534	4870	4876							0.05499770317783259
ELLSPLLTP	9	Unmodified	_ELLSPLLTP_					0	0	0		nc|ENSG00000181652|Q674R7-2|ATG9B;ENSG00000181652|ENST00000639579|ATG9B	nc|ENSG00000181652|Q674R7-2|ATG9B	nc|ENSG00000181652|Q674R7-2|ATG9B	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79541015625	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.831	1	59.831	59.331	60.331	0								0	0	0	0.30778	1	5221	5221		27.882	0	1				7037	7397	4871	4877	8239	8239					0.08312395388554705
ELLTPAKA	8	Unmodified	_ELLTPAKA_					0	0	0		ENSG00000198205|ENST00000358697|ZXDA	ENSG00000198205|ENST00000358697|ZXDA	ENSG00000198205|ENST00000358697|ZXDA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7512512207031	2	421.752736	841.490919	-1.7818	-0.0007515	-1.2969	-0.00054696	-3.0787	-0.0012985	421.7522177518738	76.828	1.8707	76.953	75.249	77.12	0.12485					132	61	3	0	0	0	0.90465	1	7157	7157		40.573	3.4135	1	487030			7038	8254	4872	4878	8240	8240					0.06383284011519663
ELLTSLEV	8	Unmodified	_ELLTSLEV_					0	0	0		nc|ENSG00000145734|A6H8Y1-7|BDP1;nc|ENSG00000145734|A6H8Y1-6|BDP1;ENSG00000145734|ENST00000358731|BDP1;nc|ENSG00000145734|A6H8Y1-2|BDP1;ENST00000508917.6_1_5:70751704-70841064:+|nuORF	nc|ENSG00000145734|A6H8Y1-7|BDP1	nc|ENSG00000145734|A6H8Y1-7|BDP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.2543029785156	2	452.255308	902.496064	0.27622	0.00012492	0.86828	0.00039269	1.1445	0.00051761	452.2554803141203	51.276	0.6007	51.284	50.99	51.591	0.0077438					19	14	2	0	0	0	0.89962	1	4416	4416		38.806	3.6054	1	86080			7039	4789	4873	4879	8241	8241					0.04091543083495708
ELLVLLVN	8	Unmodified	_ELLVLLVN_					0	0	0		nc|ENSG00000196730|P53355-4|DAPK1;ENSG00000196730|ENST00000408954|DAPK1;nc|ENSG00000196730|P53355-3|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3019714355469	2	456.791861	911.569169	-1.2357	-0.00056446	3.6845	0.0016831	2.4488	0.0011186	456.79349293734373	47.566	1.0417	47.585	46.676	47.718	0.018967					44	30	2	0	0	0	0.4196	1	3462	3462		12.207	0	1	160370			7040	8097	4874	4880	8242	8242					0.10984716596760791
ELLVMHQLLPS	11	Unmodified	_ELLVMHQLLPS_					0	0	0			REV__nc|ENSG00000068024|P56524-2|HDAC4	REV__nc|ENSG00000068024|P56524-2|HDAC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3585205078125	2	640.357573	1278.70059	-0.067952	-4.3514E-05	2.0877	0.0013369	2.0198	0.0012934	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.70737	1	10578	10578		30.318	1.1477	1	640120	+		7041	16552	4875	4881	8243	8243					0.07239158902348208
ELLVPLADL	9	Unmodified	_ELLVPLADL_					0	0	0			REV__ENST00000391858.8_1_1:231473224-231473434:+|nuORF	REV__ENST00000391858.8_1_1:231473224-231473434:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79541015625	2	491.794601	981.574648	-1.8635	-0.00091647	4.1986	0.0020648	2.3351	0.0011484	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.7932	1	4769	4769		24.203	3.2558	1	703950	+		7042	26007	4876	4882	8244	8244					0.08312395388554705
ELLVPLADL	9	Unmodified	_ELLVPLADL_					0	0	0			REV__ENST00000391858.8_1_1:231473224-231473434:+|nuORF	REV__ENST00000391858.8_1_1:231473224-231473434:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7961730957031	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.9	1	56.972	56.472	57.472	0.071835								0	0	0	0.28386	1	4802	4802		37.159	5.2042	1		+		7043	26007	4876	4882	8245	8245					0.08312395388554705
ELLVPLADL	9	Unmodified	_ELLVPLADL_					0	0	0			REV__ENST00000391858.8_1_1:231473224-231473434:+|nuORF	REV__ENST00000391858.8_1_1:231473224-231473434:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79632568359375	2	491.794601	981.574648	-0.47857	-0.00023536	2.9858	0.0014684	2.5072	0.001233	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.7932	1	4588	4588		23.042	3.6825	1	1898900	+		7044	26007	4876	4882	8246	8246					0.08312395388554705
ELLVTGLVQ	9	Unmodified	_ELLVTGLVQ_					0	0	0			REV__nc|ENSG00000164944|Q69YN4-3|VIRMA	REV__nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.2812805175781	2	486.292225	970.569897	-0.46954	-0.00022833	-3.1077	-0.0015113	-3.5773	-0.0017396	486.2897212204212	48.875	1.1296	49.335	49.025	50.155	0.45983					38	27	2	0	0	0	0.20789	1	4766	4766		25.574	0	1	340010	+		7045	29995	4877	4883	8247	8247					0.08343511245800528
ELLVYTVTLI	10	Unmodified	_ELLVYTVTLI_					0	0	0		ENSG00000135723|ENST00000258201|FHOD1;ENST00000561922.1_1_16:67270489-67272168:-|nuORF	ENSG00000135723|ENST00000258201|FHOD1	ENSG00000135723|ENST00000258201|FHOD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3521118164062	2	582.34974	1162.68493	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.3	1	115.28	114.78	115.78	-0.02433								0	0	0	0.45132	1	12772	12772		27.882	5.9224	1				7046	4048	4878	4884	8248	8248					0.11009195656970405
ELMKKVRHLR	10	Unmodified	_ELMKKVRHLR_					0	0	0		ENSG00000239810|ENST00000619922|PRAMEF11	ENSG00000239810|ENST00000619922|PRAMEF11	ENSG00000239810|ENST00000619922|PRAMEF11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2358093261719	3	437.267691	1308.78124	0.4223	0.00018466	1.5391	0.00067299	1.9614	0.00085765	437.2684847500246	59.137	1.2461	59.171	58.521	59.767	0.033905					46	35	2	0	0	0	0.37624	1	5503	5503		17.833	7.7292	1	72665			7047	8773	4879	4885	8249	8249					0.139204847359224
ELMKLGRAHCK	11	Unmodified	_ELMKLGRAHCK_					0	0	0			REV__ENSG00000256980|ENST00000370388|KHDC1L	REV__ENSG00000256980|ENST00000370388|KHDC1L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4061889648438	2	643.347017	1284.67948	0.94279	0.00060654	-3.5429	-0.0022793	-2.6001	-0.0016728	643.3446909377874	106.36	0.17213	106.46	106.35	106.52	0.099007					6	3	2	0	0	0	0.17551	1	11369	11369		37.812	0	1	29736	+		7048	23913	4880	4886	8250	8250					0.048528703218607916
ELMKLKPPAN	10	Unmodified	_ELMKLKPPAN_					0	0	0		nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-4|SBNO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.8231811523438	2	570.825909	1139.63727	-1.1206	-0.00063967	-1.4698	-0.00083899	-2.5904	-0.0014787	570.8249841435919	61.716	0.70389	61.707	61.602	62.306	-0.0094147					70	28	3	0	0	0	0.8651	1	5733	5733		25.574	1.0549	1	536910			7049	4391;14960	4881	4887	8251	8251					0.07303218185120386
ELMKVQAL	8	Unmodified	_ELMKVQAL_					0	0	0		ENSG00000152495|ENST00000282356|CAMK4	ENSG00000152495|ENST00000282356|CAMK4	ENSG00000152495|ENST00000282356|CAMK4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.5897216796875	2	466.267696	930.520839	-0.01233	-5.7492E-06	-4.2958	-0.002003	-4.3081	-0.0020087	466.2654175200052	58.489	0.53618	58.458	58.25	58.786	-0.030888					24	16	2	0	0	0	0.4196	1	5466	5466		27.882	0	1	52336			7050	5178	4882	4888	8252	8252					0.05279899685217515
ELMLEVLTF	9	Unmodified	_ELMLEVLTF_					0	0	0			REV__nc|ENSG00000183307|Q9BXQ6-2|TMEM121B	REV__nc|ENSG00000183307|Q9BXQ6-2|TMEM121B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	547.7936401367188	2	547.793743	1093.57293	-0.43219	-0.00023675	3.8874	0.0021295	3.4552	0.0018927	547.7956901076553	35.654	0.72952	35.642	35.336	36.065	-0.012199					35	15	4	0	0	0	0.72402	1	2226	2226		38.806	0.99462	1	164610	+		7051	22595	4883	4889	8253	8253					0.029890183082898147
ELMRRRVLSRR	11	Unmodified	_ELMRRRVLSRR_					0	0	0			REV__ENSG00000235034|ENST00000425202|C19orf81	REV__ENSG00000235034|ENST00000425202|C19orf81	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.29962158203125	3	491.296532	1470.86777	2.8436	0.001397	2.3878	0.0011731	5.2314	0.0025702	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.81407	2	13127	12830;13127		8.4073	2.4062	1	3274400	+		7052	23782	4884	4890	8254;8255	8255					0.15116864290462217
ELMVYYDS	8	Unmodified	_ELMVYYDS_					0	0	0			REV__ENSG00000182050|ENST00000611864|MGAT4C	REV__ENSG00000182050|ENST00000611864|MGAT4C	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.3058166503906	2	510.223151	1018.43175	0.44806	0.00022861	-1.2977	-0.00066209	-0.84959	-0.00043348	510.222685193821	93.669	0.68785	93.715	93.364	94.052	0.045448					26	15	3	0	0	0	0.4196	1	9794	9794		25.45	4.5032	1	68057	+		7053	22495	4885	4891	8256	8256					-0.07672980064967305
ELNAQFLD	8	Unmodified	_ELNAQFLD_					0	0	0		nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.23583984375	2	475.234907	948.455261	-0.52886	-0.00025133	1.1491	0.00054609	0.62023	0.00029476	475.23783017952775	29.6	0.12798	29.51	29.447	29.575	-0.089544					4	2	2	0	0	0	0.4196	1	1882	1882		58.782	0	1	16527			7054	8045	4886	4892	8257	8257					-0.021027982361488284
ELNASEVLQF	10	Unmodified	_ELNASEVLQF_					0	0	0			REV__ENST00000462711.2_1_11:113239068-113242198:+|nuORF	REV__ENST00000462711.2_1_11:113239068-113242198:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2938232421875	2	575.292953	1148.57135	-0.38737	-0.00022285	-0.71135	-0.00040923	-1.0987	-0.00063208	575.2938552163392	76.272	2.3519	76.672	75.494	77.846	0.3997					143	62	4	0	0	0	0.51302	1	8649	8649		54.776	3.5836	1	1387300	+		7055	27060	4887	4893	8258	8258					0.003011005439020664
ELNGSAKGTD	10	Unmodified	_ELNGSAKGTD_					0	0	0			REV__ENST00000521348.5_1_8:42251729-42259534:+|nuORF	REV__ENST00000521348.5_1_8:42251729-42259534:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2381591796875	2	496.238178	990.461803	0.044181	2.1924E-05	-0.1185	-5.8803E-05	-0.074317	-3.6879E-05	496.23798670369024	31.087	1.204	31.091	30.623	31.827	0.0037212					56	27	4	0	0	0	0.2953	1	2107	2107		72.879	5.3856	1	1990100	+		7056	16767	4888	4894	8259	8259					-0.03380905075425744
ELNIRKIAVR	10	Unmodified	_ELNIRKIAVR_					0	0	0			REV__ENSG00000198648|ENST00000355999|STK39	REV__ENSG00000198648|ENST00000355999|STK39	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.5890808105469	3	404.59094	1210.75099	-1.8941	-0.00076635	-2.1479	-0.00086903	-4.0421	-0.0016354	404.58993654728107	39.182	1.7584	39.182	38.483	40.241	0					111	42	4	0	0	0	0.85633	1	2480	2480		21.686	0.8486	1	190430	+		7057	23351	4889	4895	8260	8260					0.15404449342349835
ELNLPLLLDLV	11	Unmodified	_ELNLPLLLDLV_					0	0	0			REV__nc|ENSG00000197969|Q96RL7-4|VPS13A	REV__nc|ENSG00000197969|Q96RL7-4|VPS13A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.380615234375	2	626.381571	1250.74859	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.73	1	114.68	114.18	115.18	-0.05722								0	0	0	0.56276	1	12279	12279		25.574	5.5773	1		+		7058	23282	4890	4896	8261	8261					0.13324556094039508
ELNMEPFER	9	Unmodified	_ELNMEPFER_					0	0	0			REV__ENSG00000160349|ENST00000371781|LCN1	REV__ENSG00000160349|ENST00000371781|LCN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3327026367188	2	582.771331	1163.52811	-1.445	-0.0008421	1.96	0.0011422	0.51501	0.00030013	583.2736395193201	74.353	0.91066	74.744	74.122	75.033	0.3911					28	21	2	0	0	0	0.20789	1	8410	8410		30.318	0	1	94715	+		7059	20715	4891	4897	8262	8262					-0.047114125050256916
ELNMEPFER	9	Unmodified	_ELNMEPFER_					0	0	0			REV__ENSG00000160349|ENST00000371781|LCN1	REV__ENSG00000160349|ENST00000371781|LCN1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	582.771331	1163.52811	-0.44986	-0.00026217	0.56089	0.00032687	0.11103	6.4704E-05	583.2725946079413	74.282	0.80204	74.841	74.2	75.002	0.55891	0.048144	-0.0010046	NaN	56.434	25	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	148190	+		7060	20715	4891	4897							-0.047114125050256916
ELNRKYIPK	9	Unmodified	_ELNRKYIPK_					0	0	0		nc|ENSG00000230453|A2A2Z9|ANKRD18B;chr9:33541227-33543182|32|16.91|0.48|5.14|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33528841-33529000|31|33.26|0.67|5.62|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33524695-33528727|25|25.92|0.53|5.6|+|ENST00000290943|ANKRD18B,ANKRD18B;ENSG00000230453|ENST00000684830|ANKRD18B;chr9:33567314-33568671|22|13.18|0.48|4.79|+|ENST00000465094|ANKRD18B,ANKRD18B;chr9:33568893-33571246|23|13.57|0.51|4.74|+|ENST00000357927|ANKRD18B,ANKRD18B;chr9:33566500-33567103|25|14.4|0.67|4.42|+|ENST00000357927|ANKRD18B,ANKRD18B;chr9:33558187-33566219|24|13.08|0.39|5.06|+|ENST00000357927|ANKRD18B,ANKRD18B;chr9:33555820-33558058|23|12.65|0.44|4.83|+|ENST00000357927|ANKRD18B,ANKRD18B;chr9:33550579-33555708|24|16.17|0.39|5.38|+|ENST00000357927|ANKRD18B,ANKRD18B;chr9:33548855-33550430|22|16.32|0.48|5.1|+|ENST00000357927|ANKRD18B,ANKRD18B;ENSG00000180071|ENST00000399703|ANKRD18A;nc|ENSG00000180071|Q8IVF6-2|ANKRD18A	nc|ENSG00000230453|A2A2Z9|ANKRD18B;nc|ENSG00000180071|Q8IVF6-2|ANKRD18A	nc|ENSG00000230453|A2A2Z9|ANKRD18B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.8406982421875	2	580.842948	1159.67134	-0.90693	-0.00052678	-3.2677	-0.001898	-4.1746	-0.0024248	580.8407767096548	69.755	0.8518	69.79	69.548	70.399	0.035622					124	41	4	0	0	0	0.78983	1	6701	6701		27.882	1.1893	1	14836000			7061	530;15129	4892	4898	8263	8263					0.09789382668373037
ELNSLKKKHAK	11	Unmodified	_ELNSLKKKHAK_					0	0	0		nc|ENSG00000101333|Q15147-4|PLCB4;ENSG00000101333|ENST00000378473|PLCB4;ENST00000492632.5_1_20:9288449-9449247:+|nuORF;nc|ENSG00000101333|Q15147|PLCB4;nc|ENSG00000101333|Q15147-5|PLCB4;ENST00000464199.5_1_20:9351789-9459633:+|nuORF;nc|ENSG00000101333|Q15147-2|PLCB4	nc|ENSG00000101333|Q15147-4|PLCB4;ENST00000464199.5_1_20:9351789-9459633:+|nuORF	nc|ENSG00000101333|Q15147-4|PLCB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.39306640625	2	648.393336	1294.77212	-0.0023386	-1.5163E-06	-0.71325	-0.00046246	-0.71559	-0.00046398	648.3927201405174	107.38	1.0747	107.34	106.86	107.93	-0.034409					97	25	4	0	0	0	0.67778	1	11745	11745		35.152	2.4015	1	36844000			7062	1930;12086	4893	4899	8264	8264					0.13652414651210165
ELNSLKKKHAK	11	Unmodified	_ELNSLKKKHAK_					0	0	0		nc|ENSG00000101333|Q15147-4|PLCB4;ENSG00000101333|ENST00000378473|PLCB4;ENST00000492632.5_1_20:9288449-9449247:+|nuORF;nc|ENSG00000101333|Q15147|PLCB4;nc|ENSG00000101333|Q15147-5|PLCB4;ENST00000464199.5_1_20:9351789-9459633:+|nuORF;nc|ENSG00000101333|Q15147-2|PLCB4	nc|ENSG00000101333|Q15147-4|PLCB4;ENST00000464199.5_1_20:9351789-9459633:+|nuORF	nc|ENSG00000101333|Q15147-4|PLCB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3923950195312	2	648.393336	1294.77212	1.8787	0.0012181	-2.609	-0.0016917	-0.73035	-0.00047355	648.3915145457087	107.1	1.2973	107.13	106.67	107.97	0.035622					111	30	4	0	0	0	0.69995	1	11858	11858		31.53	1.2121	1	42934000			7063	1930;12086	4893	4899	8265	8265					0.13652414651210165
ELNSWLETIL	10	Unmodified	_ELNSWLETIL_					0	0	0			REV__ENSG00000146350|ENST00000398212|TBC1D32	REV__ENSG00000146350|ENST00000398212|TBC1D32	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7853698730469	3	406.551928	1216.63395	2.7353	0.001112	4.2929	0.0017453	7.0282	0.0028573	406.5536376750853	29.882	0.38591	29.867	29.601	29.987	-0.015167					11	8	2	0	0	0	0.37624	1	1513	1513		30.569	20.465	1	19052	+		7064	20007	4894	4900	8266	8266					0.034302466121062025
ELNWKKKRKLE	11	Unmodified	_ELNWKKKRKLE_					0	0	0			REV__nc|ENSG00000291135|Q92637-3|FCGR1BP	REV__nc|ENSG00000291135|Q92637-3|FCGR1BP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2992248535156	3	491.296304	1470.86708	2.8436	0.001397	2.8529	0.0014016	5.6965	0.0027986	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.78391	1	13046	13046		14.694	4.5898	1	3274400	+		7065	30302	4895	4901	8267	8267					0.1504834812237732
ELNYGLRR	8	Unmodified	_ELNYGLRR_					0	0	0		nc|ENSG00000185658|Q9NSI6-3|BRWD1;ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1	nc|ENSG00000185658|Q9NSI6-3|BRWD1	nc|ENSG00000185658|Q9NSI6-3|BRWD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.78125	2	510.78289	1019.55123	0.091613	4.6794E-05	-0.25448	-0.00012998	-0.16286	-8.3188E-05	510.7826138521108	26.501	0.82938	26.469	26.1	26.929	-0.032127					35	17	3	0	0	0	0.90983	1	1132	1132		42.396	4.5846	1	143900			7066	7732	4896	4902	8268	8268					0.04223394394614388
ELPDIEKKRLL	11	Unmodified	_ELPDIEKKRLL_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.94378662109375	3	451.941527	1352.80275	0.347	0.00015682	3.6321	0.0016415	3.9791	0.0017983	451.94308439808714	55.355	1.4573	55.446	54.835	56.292	0.091167					122	48	4	0	0	0	0.76892	1	4638	4638		17.833	1.3033	1	477300	+		7067	17579	4897	4903	8269	8269					0.14046148245620316
ELPDLLLLA	9	Unmodified	_ELPDLLLLA_					0	0	0		ENST00000600330.1_1_19:50978580-50979281:-|nuORF;nc|ENSG00000142530|Q6IPT2-2|GARIN5A;ENSG00000142530|ENST00000600100|GARIN5A	ENST00000600330.1_1_19:50978580-50979281:-|nuORF	ENST00000600330.1_1_19:50978580-50979281:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8028259277344	2	498.802426	995.590298	-0.601	-0.00029978	3.0635	0.0015281	2.4625	0.0012283	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.7932	1	4699	4699		23.042	1.3402	1	2240900			7068	4567	4898	4904	8270	8270					0.0923268190563249
ELPGLTLI	8	Unmodified	_ELPGLTLI_					0	0	0		ENST00000580840.1_2_17:29227507-29227552:-|nuORF	ENST00000580840.1_2_17:29227507-29227552:-|nuORF	ENST00000580840.1_2_17:29227507-29227552:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2617492675781	2	428.262936	854.51132	-1.1356	-0.00048635	-1.7013	-0.00072859	-2.8369	-0.0012149	428.2621524287907	91.088	2.5476	91.088	90.477	93.025	0					222	59	5	0	0	0	0.85277	2	8904	8904;9000		33.516	3.674	1	33233000			7069	14100	4899	4905	8271;8272	8271					0.0782445467133357
ELPGLTLI	8	Unmodified	_ELPGLTLI_					0	0	0		ENST00000580840.1_2_17:29227507-29227552:-|nuORF	ENST00000580840.1_2_17:29227507-29227552:-|nuORF	ENST00000580840.1_2_17:29227507-29227552:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.261474609375	2	428.262936	854.51132	1.4286	0.0006118	-4.4022	-0.0018853	-2.9736	-0.0012735	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.884	1	9544	9544		33.516	3.674	1	57042000			7070	14100	4899	4905	8273	8273					0.0782445467133357
ELPGSRYD	8	Unmodified	_ELPGSRYD_					0	0	0		nc|ENSG00000173157|P59510|ADAMTS20;ENSG00000173157|ENST00000389420|ADAMTS20;nc|ENSG00000173157|P59510-2|ADAMTS20	nc|ENSG00000173157|P59510|ADAMTS20	nc|ENSG00000173157|P59510|ADAMTS20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7238464355469	2	468.724707	935.43486	-0.75515	-0.00035396	-1.6747	-0.00078499	-2.4299	-0.001139	468.7237161519137	93.418	1.0486	93.868	93.278	94.327	0.44988					49	24	3	0	0	0	0.884	1	11190	11190		33.516	1.5607	1	570630			7071	6834	4900	4906	8274	8274					-0.03543968895951366
ELPGVKIVHA	10	Unmodified	_ELPGVKIVHA_					0	0	0		ENSG00000154553|ENST00000284767|PDLIM3	ENSG00000154553|ENST00000284767|PDLIM3	ENSG00000154553|ENST00000284767|PDLIM3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.81689453125	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.86589	1	8347	8347		29.15	2.3535	1	859730			7072	5284	4901	4907	8275	8275					0.09498308748334239
ELPHYTPAPVG	11	Unmodified	_ELPHYTPAPVG_					0	0	0			REV__ENSG00000215397|ENST00000246104|SCRT2	REV__ENSG00000215397|ENST00000246104|SCRT2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.805908203125	2	590.803488	1179.59242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.675	1	22.675	22.175	23.175	0								0	0	0	0.56276	1	682	682		27.882	2.3082	1		+		7073	23683	4902	4908	8276	8276					0.009811106434199246
ELPIIITG	8	Unmodified	_ELPIIITG_					0	0	0		ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2;ENST00000510181.5_1_3:139093277-139108392:-|nuORF	ENSG00000184432|ENST00000333188|COPB2	ENSG00000184432|ENST00000333188|COPB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.26171875	2	428.262936	854.51132	0.64464	0.00027608	-3.646	-0.0015614	-3.0014	-0.0012854	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.86288	1	9316	9316		26.796	3.7536	1	40631000			7074	7610	4903	4909	8277	8277					0.07824454671322201
ELPKPTVS	8	Unmodified	_ELPKPTVS_					0	0	0			REV__nc|ENSG00000114544|Q96GZ6-6|SLC41A3	REV__nc|ENSG00000114544|Q96GZ6-6|SLC41A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2998962402344	2	435.750193	869.485833	0.14649	6.3831E-05	2.6821	0.0011687	2.8286	0.0012325	435.7512731121654	68.79	1.1618	69.174	68.569	69.731	0.38416					51	27	2	0	0	0	0.4196	1	7597	7597		27.882	3.6795	1	280360	+		7075	18054	4904	4910	8278	8278					0.04586980148917519
ELPLDRIVKF	10	Unmodified	_ELPLDRIVKF_					0	0	0		ENSG00000154143|ENST00000284288|PANX3	ENSG00000154143|ENST00000284288|PANX3	ENSG00000154143|ENST00000284288|PANX3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	615.3657836914062	2	615.366256	1228.71796	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.957	1	79.368	78.868	79.868	0.4106								0	0	0	0.45132	1	9030	9030		45.972	1.5951	1				7076	5255	4905	4911	8279	8279					0.11274822499649417
ELPLLTVLN	9	Unmodified	_ELPLLTVLN_					0	0	0			REV__ENST00000460343.5_1_3:53268946-53269411:-|nuORF	REV__ENST00000460343.5_1_3:53268946-53269411:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3078308105469	2	506.307875	1010.6012	-0.22503	-0.00011393	2.1509	0.001089	1.9259	0.00097507	506.3089485725691	49.441	1.8113	49.348	48.371	50.182	-0.093182					75	43	2	0	0	0	0.78983	1	3800	3800		27.882	3.6795	1	253850	+		7077	27002	4906	4912	8280	8280					0.09632084279905939
ELPLVLLALV	10	Unmodified	_ELPLVLLALV_					0	0	0		nc|ENSG00000165623|P07492-2|GRP;nc|ENSG00000165623|P07492-3|GRP;chr18:59225734-59230425|18|12.56|0.41|4.92|+|ENST00000420468|GRP,GRP;ENSG00000134443|ENST00000256857|GRP	nc|ENSG00000165623|P07492-2|GRP	nc|ENSG00000165623|P07492-2|GRP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.3587646484375	2	540.357368	1078.70018	-0.09847	-5.3209E-05	2.5238	0.0013637	2.4253	0.0013105	540.3585531343375	36.951	1.7168	36.927	36.371	38.088	-0.023979					87	38	3	0	0	0	0.90957	1	2436	2436		7.6903	0.95474	1	433100			7078	256	4907	4913	8281	8281					0.16398107244799576
ELPLVLLALV	10	Unmodified	_ELPLVLLALV_					0	0	0		nc|ENSG00000165623|P07492-2|GRP;nc|ENSG00000165623|P07492-3|GRP;chr18:59225734-59230425|18|12.56|0.41|4.92|+|ENST00000420468|GRP,GRP;ENSG00000134443|ENST00000256857|GRP	nc|ENSG00000165623|P07492-2|GRP	nc|ENSG00000165623|P07492-2|GRP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.3584594726562	2	540.357368	1078.70018	0.26404	0.00014267	2.2426	0.0012118	2.5067	0.0013545	540.3583702946399	36.686	1.1714	36.789	36.281	37.453	0.10306					78	34	3	0	0	0	0.90957	1	2038	2038		7.6903	0.95474	1	384450			7079	256	4907	4913	8282	8282					0.16398107244799576
ELPLVPVK	8	Unmodified	_ELPLVPVK_					0	0	0		ENST00000463988.1_1_1:31766057-31769628:-|nuORF;ENSG00000060688|ENST00000263694|SNRNP40;nc|ENSG00000060688|Q96DI7-2|SNRNP40	ENST00000463988.1_1_1:31766057-31769628:-|nuORF	ENST00000463988.1_1_1:31766057-31769628:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.7738342285156	2	447.786579	893.558604	-0.45639	-0.00020437	1.0317	0.00046196	0.57526	0.00025759	447.78688509392816	41.264	2.4535	41.271	40.235	42.688	0.0065727					141	62	3	0	0	0	0.4196	1	3057	3057		3.41	0	1	737810			7080	1067	4908	4914	8283	8283					0.1075673394233263
ELPLVPVK	8	Unmodified	_ELPLVPVK_					0	0	0		ENST00000463988.1_1_1:31766057-31769628:-|nuORF;ENSG00000060688|ENST00000263694|SNRNP40;nc|ENSG00000060688|Q96DI7-2|SNRNP40	ENST00000463988.1_1_1:31766057-31769628:-|nuORF	ENST00000463988.1_1_1:31766057-31769628:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7877502441406	2	447.786579	893.558604	-0.98945	-0.00044306	3.8599	0.0017284	2.8705	0.0012854	447.7882068509446	38.313	0.55577	38.655	38.341	38.896	0.34187					32	13	3	0	0	0	0.84341	1	3147	3147		24.203	4.8428	1	805840			7081	1067	4908	4914	8284	8284					0.1075673394233263
ELPNVDRILKL	11	Unmodified	_ELPNVDRILKL_					0	0	0		nc|ENSG00000154864|Q9H5I5-3|PIEZO2;nc|ENSG00000154864|Q9H5I5-2|PIEZO2;nc|ENSG00000154864|Q9H5I5|PIEZO2;nc|ENSG00000154864|Q9H5I5-4|PIEZO2;ENSG00000154864|ENST00000674853|PIEZO2	nc|ENSG00000154864|Q9H5I5-3|PIEZO2	nc|ENSG00000154864|Q9H5I5-3|PIEZO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26739501953125	3	437.266122	1308.77654	-0.13248	-5.7929E-05	3.8558	0.001686	3.7233	0.0016281	437.26771661657114	51.155	1.5796	51.59	50.873	52.452	0.43505					109	37	4	0	0	0	0.77205	1	5084	5084		17.167	0.63689	1	2614800			7082	5302	4909	4915	8285	8285					0.13449879074119053
ELPRDRLVLGK	11	Unmodified	_ELPRDRLVLGK_					0	0	0		nc|ENSG00000077782|P11362-21|FGFR1;ENSG00000077782|ENST00000447712|FGFR1;nc|ENSG00000077782|P11362-19|FGFR1;nc|ENSG00000077782|P11362-2|FGFR1;nc|ENSG00000077782|P11362-7|FGFR1;nc|ENSG00000077782|P11362-8|FGFR1;nc|ENSG00000077782|P11362-20|FGFR1;nc|ENSG00000077782|P11362-3|FGFR1;nc|ENSG00000077782|P11362-4|FGFR1;nc|ENSG00000077782|P11362-14|FGFR1;nc|ENSG00000077782|P11362-9|FGFR1;nc|ENSG00000077782|P11362-10|FGFR1;nc|ENSG00000077782|P11362-6|FGFR1;nc|ENSG00000077782|P11362-5|FGFR1;nc|ENSG00000077782|P11362-11|FGFR1;ENST00000526570.5_1_8:38271148-38285795:-|nuORF;nc|ENSG00000077782|P11362-12|FGFR1;nc|ENSG00000077782|P11362-13|FGFR1	nc|ENSG00000077782|P11362-21|FGFR1	nc|ENSG00000077782|P11362-21|FGFR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3912963867188	2	648.393336	1294.77212	2.6473	0.0017165	-3.5685	-0.0023138	-0.92115	-0.00059727	648.3908884221966	106.46	0.85558	106.43	105.94	106.79	-0.034134					69	19	4	0	0	0	0.70737	1	11735	11735		30.318	0	1	16306000			7083	1386	4910	4916	8286	8286					0.13652414651210165
ELPRQAAR	8	Unmodified	_ELPRQAAR_					0	0	0		nc|ENSG00000084234|Q06481-6|APLP2	nc|ENSG00000084234|Q06481-6|APLP2	nc|ENSG00000084234|Q06481-6|APLP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2337646484375	2	470.769783	939.525013	-1.0496	-0.0004941	-0.52111	-0.00024532	-1.5707	-0.00073943	470.76968877342216	72.913	0.65753	73.299	72.917	73.575	0.38581					19	15	2	0	0	0	0.4196	1	8201	8201		26.796	2.5934	1	77946			7084	14791	4911	4917	8287	8287					0.052831252231385406
ELPRRRHV	8	Unmodified	_ELPRRRHV_					0	0	0			REV__ENST00000418304.1_3_1:235490262-235491379:-|nuORF	REV__ENST00000418304.1_3_1:235490262-235491379:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8167114257812	2	531.817599	1061.62064	-0.053058	-2.8217E-05	-1.4964	-0.00079579	-1.5494	-0.000824	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.87064	1	8580	8580		29.15	0	1	1422300	+		7085	26458	4912	4918	8288	8288					0.09229898134049108
ELPRRRHV	8	Unmodified	_ELPRRRHV_					0	0	0			REV__ENST00000418304.1_3_1:235490262-235491379:-|nuORF	REV__ENST00000418304.1_3_1:235490262-235491379:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8170776367188	2	531.817599	1061.62064	2.0148	0.0010715	-3.0419	-0.0016177	-1.0271	-0.00054621	531.8159372106508	100.77	1.2932	101.07	100.14	101.44	0.2999					63	31	3	0	0	0	0.89494	1	12206	12206		37.159	8.0096	1	532290	+		7086	26458	4912	4918	8289	8289					0.09229898134049108
ELPRSFWT	8	Unmodified	_ELPRSFWT_					0	0	0		ENST00000519132.5_1_5:178032263-178039506:-|nuORF	ENST00000519132.5_1_5:178032263-178039506:-|nuORF	ENST00000519132.5_1_5:178032263-178039506:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.7537841796875	2	518.266542	1034.51853	-0.47614	-0.00024677	0.42815	0.0002219	-0.047991	-2.4872E-05	518.2667138310187	60.567	0.36835	61.12	60.891	61.26	0.55323					11	9	2	0	0	0	0.4196	1	6465	6465		31.955	18.996	1	197530			7087	13130	4913	4919	8290	8290					0.002651872717478909
ELPSELVIL	9	Unmodified	_ELPSELVIL_					0	0	0			REV__ENST00000367498.7_1_1:185280308-185280401:-|nuORF	REV__ENST00000367498.7_1_1:185280308-185280401:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7997131347656	2	506.799883	1011.58521	-0.86379	-0.00043777	2.2593	0.001145	1.3955	0.00070725	506.8010240498416	43.849	2.352	43.815	42.486	44.838	-0.033474					86	55	2	0	0	0	0.76996	1	3577	3577		33.516	1.5607	1	326070	+		7088	25565	4914	4920	8291	8291					0.07988378043000921
ELPSIVTVA	9	Unmodified	_ELPSIVTVA_					0	0	0			REV__ENST00000429674.5_1_7:87471003-87485667:-|nuORF	REV__ENST00000429674.5_1_7:87471003-87485667:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2536315917969	2	464.771126	927.527698	-0.18979	-8.821E-05	0.91072	0.00042328	0.72093	0.00033507	464.771159580203	83.885	0.4618	84.341	83.979	84.441	0.45556					12	10	2	0	0	0	0.20789	1	9733	9733		10.866	0	1	82574	+		7089	16708	4915	4921	8292	8292					0.06103535837439722
ELPSLIKL	8	Unmodified	_ELPSLIKL_					0	0	0			REV__ENSG00000057468|ENST00000263187|MSH4	REV__ENSG00000057468|ENST00000263187|MSH4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7920837402344	2	456.791861	911.569169	0.14837	6.7774E-05	2.6615	0.0012157	2.8099	0.0012835	456.79297860960025	37.636	1.5872	38.122	37.704	39.291	0.48581					149	39	5	0	0	0	0.884	1	3136	3136		33.516	3.0119	1	8942200	+		7090	16427	4916	4922	8293	8293					0.10984716596760791
ELPVGLSE	8	Unmodified	_ELPVGLSE_					0	0	0			REV__ENST00000532681.5_1_11:45939703-45939805:-|nuORF	REV__ENST00000532681.5_1_11:45939703-45939805:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2283935546875	2	422.226551	842.438549	-0.032306	-1.364E-05	2.9234	0.0012343	2.8911	0.0012207	422.2276832627875	61.725	1.2193	61.692	61.376	62.595	-0.033173					71	53	2	0	0	0	0.884	1	5862	5862		33.516	0	1	435140	+		7091	28330	4917	4923	8294	8294					0.011027008779251446
ELPVHPKPQ	9	Unmodified	_ELPVHPKPQ_					0	0	0		ENST00000567571.5_1_15:75080899-75085480:+|nuORF	ENST00000567571.5_1_15:75080899-75085480:+|nuORF	ENST00000567571.5_1_15:75080899-75085480:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.8121337890625	2	522.795466	1043.57638	-0.50343	-0.00026319	0.33507	0.00017517	-0.16837	-8.8021E-05	522.7956703323063	30.724	0.44353	30.769	30.643	31.087	0.045341					15	9	2	0	0	0	0.20789	1	2020	2020		49.442	26.399	1	104950			7092	13949	4918	4924	8295	8295					0.056334491971938405
ELPVKKMVHI	10	Unmodified	_ELPVKKMVHI_					0	0	0			REV__ENST00000482108.1_2_7:94296225-94296471:+|nuORF	REV__ENST00000482108.1_2_7:94296225-94296471:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.8565673828125	2	597.357376	1192.7002	1.5032	0.00089792	-3.6858	-0.0022018	-2.1827	-0.0013038	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.71042	1	10934	10934		44.117	8.4985	1	1501500	+		7093	27461	4919	4925	8296	8296					0.11155783973185862
ELPYAPALGF	10	Unmodified	_ELPYAPALGF_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	539.2813110351562	2	539.2844	1076.55425	-0.90123	-0.00048602	-2.6862	-0.0014486	-3.5874	-0.0019346	539.2827714526277	76.319	0.78116	76.319	75.958	76.739	0					54	28	3	0	0	0	0.67608	1	6944	6944		45.952	6.6991	1	191520	+		7094	21394	4920	4926	8297	8297					0.01903224728744135
ELQALLPEPLV	11	Unmodified	_ELQALLPEPLV_					0	0	0		nc|ENSG00000144488|Q6ZVH7-2|ESPNL;ENSG00000144488|ENST00000343063|ESPNL;nc|ENSG00000144488|Q6ZVH7-3|ESPNL;ENST00000477241.1_1_2:239037864-239040370:+|nuORF	nc|ENSG00000144488|Q6ZVH7-2|ESPNL	nc|ENSG00000144488|Q6ZVH7-2|ESPNL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.352783203125	2	611.358096	1220.70164	-0.25906	-0.00015838	-3.0986	-0.0018944	-3.3577	-0.0020528	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.70737	1	9477	9477		30.318	4.7437	1	3360200			7095	4713	4921	4927	8298	8298					0.10011696542892423
ELQALLPEPLV	11	Unmodified	_ELQALLPEPLV_					0	0	0		nc|ENSG00000144488|Q6ZVH7-2|ESPNL;ENSG00000144488|ENST00000343063|ESPNL;nc|ENSG00000144488|Q6ZVH7-3|ESPNL;ENST00000477241.1_1_2:239037864-239040370:+|nuORF	nc|ENSG00000144488|Q6ZVH7-2|ESPNL	nc|ENSG00000144488|Q6ZVH7-2|ESPNL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3533325195312	2	611.358096	1220.70164	-0.22744	-0.00013904	-2.3258	-0.0014219	-2.5533	-0.001561	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.60058	1	9489	9489		44.377	1.981	1	8715400			7096	4713	4921	4927	8299	8299					0.10011696542892423
ELQALLPEPLV	11	Unmodified	_ELQALLPEPLV_					0	0	0		nc|ENSG00000144488|Q6ZVH7-2|ESPNL;ENSG00000144488|ENST00000343063|ESPNL;nc|ENSG00000144488|Q6ZVH7-3|ESPNL;ENST00000477241.1_1_2:239037864-239040370:+|nuORF	nc|ENSG00000144488|Q6ZVH7-2|ESPNL	nc|ENSG00000144488|Q6ZVH7-2|ESPNL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3530883789062	2	611.358096	1220.70164	-1.2523	-0.00076561	-2.209	-0.0013505	-3.4613	-0.0021161	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.53361	1	9621	9621		49.536	11.725	1	5978100			7097	4713	4921	4927	8300	8300					0.10011696542892423
ELQCLIVKT	9	Unmodified	_ELQCLIVKT_					0	0	0			REV__ENSG00000087206|ENST00000511320|UIMC1	REV__ENSG00000087206|ENST00000511320|UIMC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7669677734375	2	523.79936	1045.58417	0.71601	0.00037505	-4.4032	-0.0023064	-3.6872	-0.0019313	523.7971714208928	53.47	0.74612	53.884	53.622	54.369	0.4139					31	17	3	0	0	0	0.20789	1	5464	5464		21.686	6.0439	1	287770	+		7098	16926	4922	4928	8301	8301					0.06319840402443333
ELQCLIVKT	9	Unmodified	_ELQCLIVKT_					0	0	0			REV__ENSG00000087206|ENST00000511320|UIMC1	REV__ENSG00000087206|ENST00000511320|UIMC1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	523.79936	1045.58417	-0.10452	-5.475E-05	-3.5635	-0.0018665	-3.668	-0.0019213	523.7974444307395	53.292	0.62146	53.906	53.531	54.152	0.61436	0.01118	0.0004413	NaN	16.007	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	329850	+		7099	16926	4922	4928							0.06319840402443333
ELQDMRHK	8	Unmodified	_ELQDMRHK_					0	0	0			REV__ENSG00000278685|ENST00000615129|IQCA1L	REV__ENSG00000278685|ENST00000615129|IQCA1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7637329101562	2	528.766383	1055.51821	-0.29031	-0.00015351	-4.158	-0.0021986	-4.4483	-0.0023521	528.7639083664867	60.585	0.65085	60.974	60.605	61.256	0.38945					39	17	3	0	0	0	0.79403	1	6447	6447		63.306	1.1989	1	1077900	+		7100	24038	4923	4929	8302	8302					-0.007325557197418675
ELQDRVLIL	9	Unmodified	_ELQDRVLIL_					0	0	0		ENST00000546420.5_1_12:120437705-120530962:+|nuORF;nc|ENSG00000135127|Q6ZP65|BICDL1;ENSG00000135127|ENST00000548673|BICDL1	ENST00000546420.5_1_12:120437705-120530962:+|nuORF	ENST00000546420.5_1_12:120437705-120530962:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.8292236328125	2	549.829506	1097.64446	-1.509	-0.0008297	1.0078	0.00055412	-0.50121	-0.00027558	549.829981948683	48.545	1.2936	49.015	48.546	49.84	0.46941					84	31	4	0	0	0	1.1203E-13	2	4697	4685;4697		172.03	14.702	1	6848200			7101	3988	4924	4930	8303;8304	8304					0.09954274057213297
ELQDVITHA	9	Unmodified	_ELQDVITHA_					0	0	0		ENSG00000151360|ENST00000252505|ALLC;nc|ENSG00000151360|Q8N6M5-2|ALLC	ENSG00000151360|ENST00000252505|ALLC	ENSG00000151360|ENST00000252505|ALLC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.269287109375	2	513.266739	1024.51892	0.59242	0.00030407	2.9712	0.001525	3.5636	0.0018291	513.2681183580644	76.017	0.8701	76.15	75.72	76.59	0.13325					39	25	2	0	0	0	0.48102	1	7096	7096		52.937	8.8199	1	124400			7102	5110	4925	4931	8305	8305					0.007645622009476938
ELQEKVRLG	9	Unmodified	_ELQEKVRLG_					0	0	0		ENSG00000117360|ENST00000324862|PRPF3;ENST00000467329.5_1_1:150300781-150316915:+|nuORF;ENST00000493553.1_1_1:150315777-150316738:+|nuORF	ENSG00000117360|ENST00000324862|PRPF3	ENSG00000117360|ENST00000324862|PRPF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.3108520507812	2	536.31148	1070.60841	0.81552	0.00043737	-0.91371	-0.00049003	-0.098186	-5.2658E-05	536.3111151208288	98.264	1.5767	98.425	97.46	99.037	0.16073					71	35	3	0	0	0	0.71772	1	10198	10198		39.253	7.723	1	298380			7103	2972	4926	4932	8306	8306					0.07592816880332975
ELQGALARSA	10	Unmodified	_ELQGALARSA_					0	0	0		ENST00000465458.1_1_17:8409499-8413222:-|nuORF	ENST00000465458.1_1_17:8409499-8413222:-|nuORF	ENST00000465458.1_1_17:8409499-8413222:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2800598144531	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.76096	1	9150	9150		41.427	3.6151	1	1903500			7104	12112	4927	4933	8307	8307					0.039116708121468946
ELQHELFRQC	10	Unmodified	_ELQHELFRQC_					0	0	0		ENSG00000118193|ENST00000367350|KIF14	ENSG00000118193|ENST00000367350|KIF14	ENSG00000118193|ENST00000367350|KIF14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7791442871094	3	434.880162	1301.61866	1.4374	0.00062509	2.4487	0.0010649	3.8861	0.00169	434.8814202499905	48.698	1.3215	48.698	47.954	49.276	0.00016785					39	30	2	0	0	0	0.37624	1	3972	3972		19.263	0	1	58887			7105	3016	4928	4934	8308	8308					-0.020089434567353237
ELQINPVKLIS	11	Unmodified	_ELQINPVKLIS_					0	0	0			REV__nc|ENSG00000186314|Q8N945-2|PRELID2	REV__nc|ENSG00000186314|Q8N945-2|PRELID2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.384521484375	2	627.37682	1252.73909	6.5825	0.0041297	1.8715	0.0011742	8.454	0.0053038	627.3778931643454	110.88	0.7373	110.93	110.56	111.3	0.049095					56	30	2	0	0	0	0.6493	1	13443	13443		38.754	4.832	1	362180	+		7106	15851	4929	4935	8309	8309					0.12282787808521789
ELQINPVKLIS	11	Unmodified	_ELQINPVKLIS_					0	0	0			REV__nc|ENSG00000186314|Q8N945-2|PRELID2	REV__nc|ENSG00000186314|Q8N945-2|PRELID2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8839721679688	2	627.37682	1252.73909	6.587	0.0041325	2.6217	0.0016448	9.2086	0.0057773	627.3783410585748	112.58	0.5701	112.61	112.27	112.84	0.032707					46	19	3	0	0	0	0.75544	1	13626	13626		20.837	0.84038	1	89780	+		7107	15851	4929	4935	8310	8310					0.12282787808521789
ELQINPVKLIS	11	Unmodified	_ELQINPVKLIS_					0	0	0			REV__nc|ENSG00000186314|Q8N945-2|PRELID2	REV__nc|ENSG00000186314|Q8N945-2|PRELID2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	627.37682	1252.73909	-0.22081	-0.00013853	9.6374	0.0060463	9.4166	0.0059077	627.3826419656435	110.95	0.29543	110.89	110.79	111.08	-0.059929	-0.082569	0.0044822	NaN	38.754	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47705	+		7108	15851	4929	4935							0.12282787808521789
ELQKAFQLL	9	Unmodified	_ELQKAFQLL_					0	0	0		ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-5|EFCAB6;nc|ENSG00000186976|Q5THR3-6|EFCAB6;ENST00000404038.5_1_22:44079617-44178198:-|nuORF	ENSG00000186976|ENST00000262726|EFCAB6	ENSG00000186976|ENST00000262726|EFCAB6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.317138671875	2	545.318774	1088.623	-0.68757	-0.00037494	-3.0506	-0.0016636	-3.7382	-0.0020385	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.77696	1	8462	8462		31.53	1.2121	1	3608000			7109	7832	4930	4936	8311	8311					0.08222889028479585
ELQKEVRSA	9	Unmodified	_ELQKEVRSA_					0	0	0		nc|ENSG00000132470|P16144-4|ITGB4;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;ENSG00000132470|ENST00000200181|ITGB4;ENST00000580542.5_1_17:73720783-73737087:+|nuORF;nc|ENSG00000132470|P16144-5|ITGB4;ENST00000584374.1_1_17:73727904-73735976:+|nuORF	nc|ENSG00000132470|P16144-4|ITGB4	nc|ENSG00000132470|P16144-4|ITGB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2930908203125	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.75725	1	9354	9354		36.447	1.2947	1	1864800			7110	3798	4931	4937	8312	8312					0.045079399836367884
ELQKEVRSA	9	Unmodified	_ELQKEVRSA_					0	0	0		nc|ENSG00000132470|P16144-4|ITGB4;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;ENSG00000132470|ENST00000200181|ITGB4;ENST00000580542.5_1_17:73720783-73737087:+|nuORF;nc|ENSG00000132470|P16144-5|ITGB4;ENST00000584374.1_1_17:73727904-73735976:+|nuORF	nc|ENSG00000132470|P16144-4|ITGB4	nc|ENSG00000132470|P16144-4|ITGB4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2931518554688	2	530.293288	1058.57202	-1.2396	-0.00065735	1.1575	0.00061382	-0.082084	-4.3529E-05	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.78528	1	10710	10710		29.17	0.020503	1	1818700			7111	3798	4931	4937	8313	8313					0.045079399836367884
ELQKLKEKHK	10	Unmodified	_ELQKLKEKHK_					0	0	0			REV__ENST00000527833.5_1_15:101814760-101817622:-|nuORF	REV__ENST00000527833.5_1_15:101814760-101817622:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3590087890625	2	640.887887	1279.76122	1.5926	0.0010207	1.4779	0.00094714	3.0704	0.0019678	640.8885074730567	100.05	0.30534	100.27	100.03	100.33	0.21511					10	6	2	0	0	0	0.37624	1	10409	10409		17.468	0	1	39001	+		7112	18974	4932	4938	8314	8314					0.13253012276913978
ELQKLQPE	8	Unmodified	_ELQKLQPE_					0	0	0		L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|137|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|137|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|137|3|sense	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.77337646484375	2	492.771657	983.528761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.359	1	72.401	71.901	72.901	0.042114								0	0	0	0.30811	1	6959	6959		45.952	1.5748	1				7113	14677	4933	4939	8315	8315					0.03633750206336117
ELQKRFRKL	9	Unmodified	_ELQKRFRKL_					0	0	0			REV__ENSG00000131044|ENST00000535842|TTLL9	REV__ENSG00000131044|ENST00000535842|TTLL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.58746337890625	3	406.587418	1216.74043	-0.37107	-0.00015087	0.97422	0.00039611	0.60315	0.00024523	406.58772324462274	24.588	2.4069	24.542	24.117	26.524	-0.04598					132	57	4	0	0	0	0.77696	2	954	954;1017		31.53	0	1	381610	+		7114	18932	4934	4940	8316;8317	8316					0.14072466687935048
ELQKRFRKL	9	Unmodified	_ELQKRFRKL_					0	0	0			REV__ENSG00000131044|ENST00000535842|TTLL9	REV__ENSG00000131044|ENST00000535842|TTLL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.5875549316406	3	406.587418	1216.74043	2.8188	0.0011461	-2.2251	-0.00090468	0.5937	0.00024139	406.58643454203246	24.703	1.6586	24.666	24.201	25.86	-0.037178					110	42	4	0	0	0	0.6204	2	937	916;937		45.972	0	1	337090	+		7115	18932	4934	4940	8318;8319	8319					0.14072466687935048
ELQKRFRKL	9	Unmodified	_ELQKRFRKL_					0	0	0			REV__ENSG00000131044|ENST00000535842|TTLL9	REV__ENSG00000131044|ENST00000535842|TTLL9	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	406.587418	1216.74043	2.2321	0.00090756	-2.2045	-0.00089634	0.027594	1.1219E-05	406.5864144764371	25.17	0.3958	24.739	24.499	24.895	-0.4311	0.17697	-0.002174	NaN	45.972	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33347	+		7116	18932	4934	4940							0.14072466687935048
ELQKRKYELL	10	Unmodified	_ELQKRKYELL_					0	0	0			REV__nc|ENSG00000154310|Q9UKE5-7|TNIK	REV__nc|ENSG00000154310|Q9UKE5-7|TNIK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.5946350097656	3	440.594238	1318.76089	-0.019721	-8.689E-06	1.2814	0.00056456	1.2616	0.00055587	440.59463679641283	25.358	1.7124	25.03	24.476	26.188	-0.32825					109	38	4	0	0	0	0.86698	1	1334	1334		28.081	2.1898	1	990660	+		7117	20382	4935	4941	8320	8320					0.11425592557111486
ELQLAAAP	8	Unmodified	_ELQLAAAP_					0	0	0		nc|ENSG00000006555|Q5TAA0-2|TTC22;ENSG00000006555|ENST00000371276|TTC22	nc|ENSG00000006555|Q5TAA0-2|TTC22	nc|ENSG00000006555|Q5TAA0-2|TTC22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7292175292969	2	406.729261	811.443968	-0.18786	-7.6407E-05	-2.7564	-0.0011211	-2.9442	-0.0011975	406.7280690694445	76.123	2.0682	76.173	74.921	76.99	0.049194					93	66	2	0	0	0	0.8347	1	7346	7346		23.042	0	1	123610			7118	14733	4936	4942	8321	8321					0.030704244603725783
ELQLFQAER	9	Unmodified	_ELQLFQAER_					0	0	0		ENSG00000221923|ENST00000422689|ZNF880	ENSG00000221923|ENST00000422689|ZNF880	ENSG00000221923|ENST00000422689|ZNF880	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3296508789062	2	567.301113	1132.58767	-1.396	-0.00079193	-1.5497	-0.00087915	-2.9457	-0.0016711	567.3001655626105	90.142	0.64407	90.318	89.825	90.469	0.1758					19	14	2	0	0	0	0.20789	1	8962	8962		29.17	0	1	88562			7119	8684	4937	4943	8322	8322					0.026682265006456873
ELQLRTINTD	10	Unmodified	_ELQLRTINTD_					0	0	0			REV__ENSG00000111057|ENST00000388835|KRT18	REV__ENSG00000111057|ENST00000388835|KRT18	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.5549011230469	3	401.550698	1201.63027	-0.40521	-0.00016271	1.4897	0.00059818	1.0845	0.00043547	401.55121833603926	16.748	0.18295	16.669	16.618	16.801	-0.079056					8	6	2	0	0	0	0.37624	1	156	156		3.4087	0	1	15447	+		7120	17846	4938	4944	8323	8323					0.03751576838226356
ELQLVTPMA	9	Unmodified	_ELQLVTPMA_					0	0	0		nc|ENSG00000172046|O94966|USP19;nc|ENSG00000172046|O94966-5|USP19;nc|ENSG00000172046|O94966-4|USP19;nc|ENSG00000172046|O94966-3|USP19;nc|ENSG00000172046|O94966-7|USP19;ENSG00000172046|ENST00000417901|USP19	nc|ENSG00000172046|O94966|USP19	nc|ENSG00000172046|O94966|USP19	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904968261719	2	501.270435	1000.52632	-0.064702	-3.2433E-05	-0.99488	-0.0004987	-1.0596	-0.00053114	501.2720236196321	86.968	0.56312	87.035	86.707	87.271	0.067436					26	12	3	0	0	0	0.20789	1	8787	8787		32.812	4.9302	1	92761			7121	15095	4939	4945	8324	8324					0.026075784770114296
ELQMDLVPT	9	Unmodified	_ELQMDLVPT_					0	0	0		ENST00000398117.1_1_18:60795154-60795277:-|nuORF	ENST00000398117.1_1_18:60795154-60795277:-|nuORF	ENST00000398117.1_1_18:60795154-60795277:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.303466796875	2	523.26535	1044.51615	-0.17773	-9.3E-05	3.3401	0.0017477	3.1623	0.0016547	523.267417006406	88.281	0.61675	88.488	87.893	88.509	0.20731					18	14	2	0	0	0	0.20789	1	8742	8742		14.865	0	1	75675			7122	11175	4940	4946	8325	8325					-0.004330292482109144
ELQNKKEAAF	10	Unmodified	_ELQNKKEAAF_					0	0	0			REV__ENSG00000179041|ENST00000320270|RRS1	REV__ENSG00000179041|ENST00000320270|RRS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3425903320312	2	589.31422	1176.61389	-0.68204	-0.00040194	0.36969	0.00021786	-0.31236	-0.00018408	589.3141860402822	92.384	0.38596	92.453	92.112	92.498	0.06987					11	8	2	0	0	0	0.37624	1	9543	9543		31.634	0	1	112040	+		7123	22309	4941	4947	8326	8326					0.032644956721242124
ELQNKLPKARV	11	Unmodified	_ELQNKLPKARV_					0	0	0		nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-4|SBNO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3921508789062	2	648.393336	1294.77212	0.024156	1.5662E-05	-0.92906	-0.00060239	-0.9049	-0.00058673	648.3927913840552	106.64	2.0197	106.64	104.87	106.89	0					89	46	4	0	0	0	0.72106	1	11036	11036		28.081	1.3886	1	6259100			7124	4391;14960	4942	4948	8327	8327					0.13652414651210165
ELQNKLPKARV	11	Unmodified	_ELQNKLPKARV_					0	0	0		nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-4|SBNO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3922119140625	2	648.393336	1294.77212	1.8787	0.0012181	-2.6701	-0.0017313	-0.7914	-0.00051314	648.3914694260502	106.27	0.88895	106.3	105.79	106.67	0.03688					67	20	4	0	0	0	0.7144	2	11676	11617;11676		29.17	1.3886	1	16251000			7125	4391;14960	4942	4948	8328;8329	8329					0.13652414651210165
ELQNKLPKARV	11	Unmodified	_ELQNKLPKARV_					0	0	0		nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-4|SBNO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3916015625	2	648.393336	1294.77212	0.94474	0.00061257	-1.779	-0.0011535	-0.83426	-0.00054093	648.3921194247092	106.15	2.119	106.24	104.58	106.7	0.099007					110	52	4	0	0	0	0.70737	1	11311	11311		30.318	3.2704	1	47497000			7126	4391;14960	4942	4948	8330	8330					0.13652414651210165
ELQNVRKHI	9	Unmodified	_ELQNVRKHI_					0	0	0		ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000198513|Q8WXF7-2|ATL1;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-2|ATL2;ENSG00000119787|ENST00000378954|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2	ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2	ENSG00000198513|ENST00000358385|ATL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.8531494140625	2	568.830372	1135.64619	2.8912	0.0016446	-2.7796	-0.0015811	0.11159	6.3477E-05	568.8295107657996	102.38	0.73088	102.33	102.1	102.83	-0.047005					35	17	3	0	0	0	0.20789	1	11229	11229		52.937	12.159	1	219040			7127	8279;14871;14872	4943	4949	8331	8331					0.08379327865804953
ELQPITGI	8	Unmodified	_ELQPITGI_					0	0	0		ENSG00000165526|ENST00000298317|RPUSD4;nc|ENSG00000165526|Q96CM3-2|RPUSD4;ENST00000530903.1_1_11:126073315-126075741:-|nuORF	ENSG00000165526|ENST00000298317|RPUSD4	ENSG00000165526|ENST00000298317|RPUSD4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7806091308594	2	435.750193	869.485833	0.86858	0.00037848	0.88629	0.0003862	1.7549	0.00076469	435.7499943715746	33.847	0.12408	33.849	33.748	33.872	0.0026054					4	2	2	0	0	0	0.4196	1	2016	2016		10.265	0.5596	1	11400			7128	6092	4944	4950	8332	8332					0.0458698014890615
ELQRIQAVHQ	10	Unmodified	_ELQRIQAVHQ_					0	0	0			REV__nc|ENSG00000007202|Q14667-2|BLTP2	REV__nc|ENSG00000007202|Q14667-2|BLTP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.34033203125	2	611.338561	1220.66257	0.20763	0.00012693	-4.0335	-0.0024658	-3.8258	-0.0023389	611.3358423834037	80.837	1.6482	81.259	80.427	82.075	0.4215					76	39	3	0	0	0	0.80179	1	9311	9311		39.253	2.8061	1	1617600	+		7129	16118	4945	4951	8333	8333					0.06106409031895055
ELQRIQAVHQ	10	Unmodified	_ELQRIQAVHQ_					0	0	0			REV__nc|ENSG00000007202|Q14667-2|BLTP2	REV__nc|ENSG00000007202|Q14667-2|BLTP2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	611.338561	1220.66257	0.28109	0.00017184	-3.8912	-0.0023788	-3.6101	-0.002207	611.3357462896936	80.761	2.6609	81.288	79.593	82.254	0.52676	0.014478	0.00010405	NaN	39.253	110	63	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1638900	+		7130	16118	4945	4951							0.06106409031895055
ELQRRKEQLR	10	Unmodified	_ELQRRKEQLR_					0	0	0		nc|ENSG00000058600|Q9NVU0-3|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;ENSG00000058600|ENST00000299853|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9317932128906	3	452.600386	1354.77933	-1.206	-0.00054582	3.3827	0.001531	2.1767	0.0009852	452.60193821106503	97.808	0.52621	98.036	97.865	98.391	0.22787					17	11	2	0	0	0	0.37624	1	10141	10141		24.232	18.819	1	47019			7131	13880	4946	4952	8334	8334					0.11613147251659939
ELQRRLKRLYP	11	Unmodified	_ELQRRLKRLYP_					0	0	0		ENSG00000010017|ENST00000011619|RANBP9	ENSG00000010017|ENST00000011619|RANBP9	ENSG00000010017|ENST00000011619|RANBP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.29742431640625	3	491.300048	1470.87832	-0.62704	-0.00030807	-1.6787	-0.00082474	-2.3057	-0.0011328	491.2990736869804	110.17	1.4737	110.28	110.04	111.52	0.11659					96	54	2	0	0	0	0.7896	2	11948	11948;11968		13.508	3.4443	1	713080			7132	760	4947	4953	8335;8336	8335					0.16171170216580322
ELQRRLKRLYP	11	Unmodified	_ELQRRLKRLYP_					0	0	0		ENSG00000010017|ENST00000011619|RANBP9	ENSG00000010017|ENST00000011619|RANBP9	ENSG00000010017|ENST00000011619|RANBP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.2987060546875	3	491.300048	1470.87832	0.79439	0.00039029	-3.0432	-0.0014951	-2.2488	-0.0011048	491.29846333999706	107.88	0.47234	107.96	107.54	108.01	0.084412					45	11	6	0	0	0	0.81219	1	11610	11610		8.7993	0.76496	1	262750000			7133	760	4947	4953	8337	8337					0.16171170216580322
ELQRRLKRLYP	11	Unmodified	_ELQRRLKRLYP_					0	0	0		ENSG00000010017|ENST00000011619|RANBP9	ENSG00000010017|ENST00000011619|RANBP9	ENSG00000010017|ENST00000011619|RANBP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.2985534667969	3	491.300048	1470.87832	0.79409	0.00039014	-3.1689	-0.0015569	-2.3748	-0.0011667	491.2983578004565	110.36	1.7546	110.43	110.06	111.81	0.073685					124	58	3	0	0	0	0.78391	1	11998	11998		14.694	5.0475	1	390370			7134	760	4947	4953	8338	8338					0.16171170216580322
ELQRTREA	8	Unmodified	_ELQRTREA_					0	0	0			REV__nc|ENSG00000095066|Q96ED9-2|HOOK2	REV__nc|ENSG00000095066|Q96ED9-2|HOOK2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.29046630859375	2	501.76998	1001.52541	-0.26602	-0.00013348	0.30955	0.00015532	0.043535	2.1844E-05	501.77022902880645	87.706	3.534	87.759	86.479	90.013	0.053032					151	82	3	0	0	0	0.4196	1	9116	9116		29.15	0	1	146190	+		7135	17052	4948	4954	8339	8339					0.02470500152344357
ELQTLPNPA	9	Unmodified	_ELQTLPNPA_					0	0	0			REV__ENST00000461023.5_1_16:343426-396314:-|nuORF	REV__ENST00000461023.5_1_16:343426-396314:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.76763916015625	2	491.763832	981.513111	-0.68773	-0.0003382	0.40844	0.00020085	-0.2793	-0.00013735	491.764094371889	63.714	0.58361	63.834	63.594	64.178	0.12004					48	28	2	0	0	0	0.67345	1	5594	5594		42.396	3.1433	1	133120	+		7136	17389	4949	4955	8340	8340					0.02161463689287757
ELQTYLFHL	9	Unmodified	_ELQTYLFHL_					0	0	0			REV__ENSG00000185736|ENST00000381312|ADARB2	REV__ENSG00000185736|ENST00000381312|ADARB2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3534545898438	2	582.308406	1162.60226	-0.84605	-0.00049266	-2.7208	-0.0015843	-3.5668	-0.002077	582.3064549871883	104.41	0.26647	104.4	104.2	104.47	-0.0035706					7	5	2	0	0	0	0.20789	1	11241	11241		34.173	5.0025	1	27999	+		7137	22789	4950	4956	8341	8341					0.027462986488444585
ELRARAIFL	9	Unmodified	_ELRARAIFL_					0	0	0			REV__nc|ENSG00000164597|Q9UP83-3|COG5	REV__nc|ENSG00000164597|Q9UP83-3|COG5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.830078125	2	544.832383	1087.65021	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.888	1	39.442	38.942	39.942	0.55449								0	0	0	0.29273	1	3243	3243		40.778	1.5253	1		+		7138	21092	4951	4957	8342	8342					0.10989417359519393
ELRDKLEPSK	10	Unmodified	_ELRDKLEPSK_					0	0	0			REV__ENSG00000197892|ENST00000524189|KIF13B	REV__ENSG00000197892|ENST00000524189|KIF13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.564697265625	3	405.562827	1213.66665	1.5319	0.00062128	3.2091	0.0013015	4.741	0.0019228	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.86272	1	5897	5897		17.833	1.9125	1	245170	+		7139	23277	4952	4958	8343	8343					0.0683645373494528
ELRGRGRVLLP	11	Unmodified	_ELRGRGRVLLP_					0	0	0		ENST00000223459.10_1_16:30582395-30583035:-|nuORF	ENST00000223459.10_1_16:30582395-30583035:-|nuORF	ENST00000223459.10_1_16:30582395-30583035:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3687744140625	2	633.39367	1264.77279	1.4695	0.0009308	-2.8375	-0.0017973	-1.368	-0.00086648	633.3909990560433	97.745	0.55418	97.973	97.529	98.083	0.22787					24	12	3	0	0	0	0.1728	1	10061	10061		24.519	7.0512	1	111860			7140	9182	4953	4959	8344	8344					0.15099254090932845
ELRKPSLLKEP	11	Unmodified	_ELRKPSLLKEP_					0	0	0			REV__nc|ENSG00000174791|Q13671-2|RIN1	REV__nc|ENSG00000174791|Q13671-2|RIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677917480469	3	437.266122	1308.77654	-0.071192	-3.113E-05	4.1078	0.0017962	4.0366	0.0017651	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.75779	1	4516	4516		20.315	3.7852	1	3270700	+		7141	22014	4954	4960	8345	8345					0.1344987907414179
ELRKPSLLKEP	11	Unmodified	_ELRKPSLLKEP_					0	0	0			REV__nc|ENSG00000174791|Q13671-2|RIN1	REV__nc|ENSG00000174791|Q13671-2|RIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.270263671875	3	437.266122	1308.77654	0.94785	0.00041446	4.1396	0.0018101	5.0875	0.0022246	437.6021157281718	55.109	0.32409	55.136	54.92	55.244	0.027142					11	7	2	0	0	0	0.73277	1	4930	4930		25.892	3.3301	1	286510	+		7142	22014	4954	4960	8346	8346					0.1344987907414179
ELRKTKEVPWR	11	Unmodified	_ELRKTKEVPWR_					0	0	0		nc|ENSG00000155749|Q96Q35|FLACC1	nc|ENSG00000155749|Q96Q35|FLACC1	nc|ENSG00000155749|Q96Q35|FLACC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.28302001953125	3	481.280654	1440.82013	2.7369	0.0013172	2.3373	0.0011249	5.0743	0.0024421	481.2817189970154	101.62	1.8989	101.57	100.36	102.26	-0.049828					113	44	3	0	0	0	0.74989	1	11119	11119		22.075	4.2423	1	536510			7143	15008	4955	4961	8347	8347					0.1173548857127571
ELRLRNRQRL	10	Unmodified	_ELRLRNRQRL_					0	0	0			REV__ENSG00000011260|ENST00000225298|UTP18	REV__ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9432678222656	3	451.944376	1352.8113	0.2172	9.8162E-05	-2.8737	-0.0012987	-2.6565	-0.0012006	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.85633	1	4654	4654		21.686	0.8486	1	771970	+		7144	16181	4956	4962	8348	8348					0.14900559725447238
ELRLRNRQRL	10	Unmodified	_ELRLRNRQRL_					0	0	0			REV__ENSG00000011260|ENST00000225298|UTP18	REV__ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9439697265625	3	451.944376	1352.8113	-1.2917	-0.0005838	-1.0632	-0.0004805	-2.3549	-0.0010643	451.94377054874303	55.311	1.3656	55.375	54.704	56.07	0.063725					141	47	4	0	0	0	0.86207	1	4625	4625		24.232	3.1996	1	457030	+		7145	16181	4956	4962	8349	8349					0.14900559725447238
ELRLRNRQRL	10	Unmodified	_ELRLRNRQRL_					0	0	0			REV__ENSG00000011260|ENST00000225298|UTP18	REV__ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9432678222656	3	451.944376	1352.8113	0.347	0.00015682	-2.6726	-0.0012079	-2.3256	-0.001051	451.94308439808714	55.355	1.4573	55.446	54.835	56.292	0.091167					122	48	4	0	0	0	0.86802	1	4648	4648		27.047	3.6694	1	477300	+		7146	16181	4956	4962	8350	8350					0.14900559725447238
ELRLRNRQRL	10	Unmodified	_ELRLRNRQRL_					0	0	0			REV__ENSG00000011260|ENST00000225298|UTP18	REV__ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9443054199219	3	451.944376	1352.8113	-0.57992	-0.00026209	-1.7477	-0.00078988	-2.3277	-0.001052	451.9434686963914	54.414	0.67409	54.364	54.07	54.744	-0.049271					51	21	3	0	0	0	0.8492	1	4490	4490		18.531	1.3643	1	176770	+		7147	16181	4956	4962	8351	8351					0.14900559725447238
ELRLRVTG	8	Unmodified	_ELRLRVTG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2882995605469	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.88601	1	12524	12524		34.173	3.6689	1	3080300			7148	5333	4957	4963	8352	8352					0.0874858239999412
ELRPLMTRQ	9	Unmodified	_ELRPLMTRQ_					0	0	0			REV__ENST00000531120.5_1_11:32611159-32616479:+|nuORF	REV__ENST00000531120.5_1_11:32611159-32616479:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.331298828125	2	572.318783	1142.62301	-1.0849	-0.00062092	1.2446	0.00071232	0.15971	9.1407E-05	572.3194066199339	102.37	0.47961	102.39	102.24	102.72	0.019882					15	11	2	0	0	0	0.20789	1	10976	10976		24.519	0	1	88350	+		7149	28295	4958	4964	8353	8353					0.05740565756809701
ELRQKRIKKP	10	Unmodified	_ELRQKRIKKP_					0	0	0			REV__ENSG00000151023|ENST00000331161|ENKUR	REV__ENSG00000151023|ENST00000331161|ENKUR	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3930053710938	2	648.417146	1294.81974	0.024155	1.5663E-05	-4.1343	-0.0026808	-4.1102	-0.0026651	648.916262302184	107.16	0.39288	107.16	106.89	107.28	0					12	8	3	0	0	0	0.37624	1	11143	11143		14.865	0	1	142210	+		7150	20234	4959	4965	8354	8354					0.18412113642057193
ELRQRWSM	8	Unmodified	_ELRQRWSM_					0	0	0		nc|ENSG00000198003|A5D8V7-2|ODAD3;ENSG00000198003|ENST00000356392|ODAD3	nc|ENSG00000198003|A5D8V7-2|ODAD3	nc|ENSG00000198003|A5D8V7-2|ODAD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8306884765625	2	553.2822	1104.54985	0.54349	0.00030071	1.5862	0.00087764	2.1297	0.0011783	553.2827934155225	89.472	0.50162	89.923	89.611	90.113	0.45058					14	11	2	0	0	0	0.4196	1	10588	10588		10.866	0	1	98762			7151	8226	4960	4966	8355	8355					0.0017543703420415113
ELRRCRAF	8	Unmodified	_ELRRCRAF_					0	0	0		nc|ENSG00000165521|Q05BV3|EML5;ENSG00000165521|ENST00000554922|EML5;ENST00000553281.5_1_14:89088194-89171927:-|nuORF	nc|ENSG00000165521|Q05BV3|EML5	nc|ENSG00000165521|Q05BV3|EML5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.361328125	2	525.78491	1049.55527	0.39355	0.00020692	3.2026	0.0016839	3.5962	0.0018908	526.2860554740495	33.923	0.13266	33.877	33.763	33.896	-0.045815					5	4	2	0	0	0	0.4196	1	1671	1671		31.955	1.4512	1	19488			7152	6090	4961	4967	8356	8356					0.032471606166836864
ELRRLAVK	8	Unmodified	_ELRRLAVK_					0	0	0			REV__ENST00000604175.5_1_9:90586022-90589430:-|nuORF;REV__ENST00000603475.1_1_9:90586022-90589145:-|nuORF	REV__ENST00000603475.1_1_9:90586022-90589145:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.7938537597656	2	492.819276	983.623999	-0.70088	-0.00034541	0.12364	6.0933E-05	-0.57724	-0.00028447	492.819264654261	32.06	0.4717	32.187	31.945	32.417	0.12642					20	10	3	0	0	0	0.4196	1	2206	2206		35.618	12.576	1	164910	+		7153	20482;29345	4962	4968	8357	8357					0.1315314818804154
ELRRQMEPR	9	Unmodified	_ELRRQMEPR_					0	0	0			REV__ENST00000571023.1_1_17:4869560-4871044:-|nuORF	REV__ENST00000571023.1_1_17:4869560-4871044:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5527648925781	3	405.552268	1213.63497	0.31154	0.00012634	0.37413	0.00015173	0.68567	0.00027808	405.55242896235654	28.737	3.0603	28.708	27.908	30.968	-0.029207					186	70	5	0	0	0	0.69624	1	1753	1753		32.751	0	1	9803100	+		7154	28930	4963	4969	8358	8358					0.03670182500013652
ELRRRPEPE	9	Unmodified	_ELRRRPEPE_					0	0	0			REV__ENSG00000167693|ENST00000336868|NXN	REV__ENSG00000167693|ENST00000336868|NXN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	591.31640625	2	591.322911	1180.63127	-2.1672	-0.0012815	-3.0003	-0.0017741	-5.1675	-0.0030557	591.320992459415	66.799	0.86491	66.827	66.467	67.332	0.02858					92	41	3	0	0	0	0.6204	1	6303	6303		45.972	0.020292	1	233490	+		7155	21417	4964	4970	8359	8359					0.048178359978237495
ELRSPRRLRA	10	Unmodified	_ELRSPRRLRA_					0	0	0		ENST00000232564.7_1_3:179169144-179169282:-|nuORF	ENST00000232564.7_1_3:179169144-179169282:-|nuORF	ENST00000232564.7_1_3:179169144-179169282:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3803100585938	2	627.381094	1252.74764	-1.2001	-0.00075294	2.7493	0.0017248	1.5491	0.0009719	627.3827611804128	112.09	1.416	112.07	111.56	112.98	-0.01989					130	45	4	0	0	0	0.8486	1	12044	12044		18.262	0.79408	1	42384000			7156	9219	4965	4971	8360	8360					0.13137199288371448
ELRVGGAR	8	Unmodified	_ELRVGGAR_					0	0	0		ENST00000397261.7_1_3:9834275-9834479:+|nuORF	ENST00000397261.7_1_3:9834275-9834479:+|nuORF	ENST00000397261.7_1_3:9834275-9834479:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	429.2355651855469	2	429.251226	856.487899	-0.18466	-7.9264E-05	-0.55452	-0.00023803	-0.73918	-0.00031729	429.2525836057263	63.316	0.24834	63.282	63.168	63.416	-0.03371					23	11	3	0	0	0	0.4196	1	5998	5998		45.952	8.7928	1	41484			7157	11142	4966	4972	8361	8361					0.05391453677384561
ELRVKDSLLRK	11	Unmodified	_ELRVKDSLLRK_					0	0	0		ENST00000556340.1_1_9:139265151-139266545:-|nuORF;nc|ENSG00000289701|Q9H257-3|CARD9;nc|ENSG00000289701|Q9H257-2|CARD9;ENSG00000187796|ENST00000371732|CARD9	ENST00000556340.1_1_9:139265151-139266545:-|nuORF	ENST00000556340.1_1_9:139265151-139266545:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.9482116699219	3	452.948904	1355.82488	1.1591	0.00052504	-2.3142	-0.0010482	-1.1551	-0.00052319	452.947744260499	107.13	1.326	107.16	106.32	107.65	0.035622					97	30	5	0	0	0	0.72374	1	11803	11803		27.644	5.8635	1	2905000			7158	7883	4967	4973	8362	8362					0.1612037271402187
ELRVKDSLLRK	11	Unmodified	_ELRVKDSLLRK_					0	0	0		ENST00000556340.1_1_9:139265151-139266545:-|nuORF;nc|ENSG00000289701|Q9H257-3|CARD9;nc|ENSG00000289701|Q9H257-2|CARD9;ENSG00000187796|ENST00000371732|CARD9	ENST00000556340.1_1_9:139265151-139266545:-|nuORF	ENST00000556340.1_1_9:139265151-139266545:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.9478454589844	3	452.948904	1355.82488	-1.1932	-0.00054047	-0.38638	-0.00017501	-1.5796	-0.00071548	452.9486366147782	106.8	1.2296	106.95	106.47	107.7	0.14843					124	29	6	0	0	0	0.74771	1	11449	11449		22.562	0	1	8171700			7159	7883	4967	4973	8363	8363					0.1612037271402187
ELRVLQETRA	10	Unmodified	_ELRVLQETRA_					0	0	0			REV__ENSG00000120262|ENST00000239374|CCDC170	REV__ENSG00000120262|ENST00000239374|CCDC170	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5653076171875	3	405.566571	1213.67788	-1.5858	-0.00064316	-3.0129	-0.0012219	-4.5987	-0.0018651	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.8583	1	5192	5192		22.562	2.2466	1	181560	+		7160	18404	4968	4974	8364	8364					0.07959275829102808
ELRVLQETRA	10	Unmodified	_ELRVLQETRA_					0	0	0			REV__ENSG00000120262|ENST00000239374|CCDC170	REV__ENSG00000120262|ENST00000239374|CCDC170	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.564453125	3	405.566571	1213.67788	-1.8641	-0.000756	-3.3109	-0.0013428	-5.175	-0.0020988	405.56510136906576	61.167	0.87137	61.268	60.446	61.317	0.10082					82	40	3	0	0	0	0.76747	1	5302	5302		41.08	4.7624	1	1002300	+		7161	18404	4968	4974	8365	8365					0.07959275829102808
ELRVRLAS	8	Unmodified	_ELRVRLAS_					0	0	0		ENSG00000130203|ENST00000252486|APOE	ENSG00000130203|ENST00000252486|APOE	ENSG00000130203|ENST00000252486|APOE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2878112792969	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.84341	1	9963	9963		24.203	0	1	48696000			7162	3624	4969	4975	8366	8366					0.0874858239999412
ELRWHDHYYRR	11	Unmodified	_ELRWHDHYYRR_					0	0	0			REV__ENSG00000188070|ENST00000433688|ZFTA	REV__ENSG00000188070|ENST00000433688|ZFTA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.622802734375	3	544.27104	1629.79129	-1.3777	-0.00074983	0.90813	0.00049427	-0.46955	-0.00025556	544.2723656922508	61.863	0.1787	62.252	62.138	62.317	0.38846					5	3	2	0	0	0	0.18209	1	6615	6615		11.455	8.0459	1	38948	+		7163	22976	4970	4976	8367	8367					0.0015876399481840053
ELRYIKQGLL	10	Unmodified	_ELRYIKQGLL_					0	0	0			REV__ENST00000473053.5_1_4:6055704-6058424:-|nuORF	REV__ENST00000473053.5_1_4:6055704-6058424:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.5840148925781	3	411.583562	1231.72886	1.5828	0.00065145	-0.12338	-5.078E-05	1.4594	0.00060067	411.5834556402397	21.313	1.331	20.869	20.477	21.808	-0.44324					86	30	5	0	0	0	0.66675	1	769	769		46.457	7.7032	1	766690	+		7164	27276	4971	4977	8368	8368					0.12226224873961655
ELSCLPPLPR	10	Unmodified	_ELSCLPPLPR_					0	0	0			REV__nc|ENSG00000149527|O75038-3|PLCH2	REV__nc|ENSG00000149527|O75038-3|PLCH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.8116455078125	2	562.810259	1123.60597	0.62688	0.00035281	2.5703	0.0014466	3.1972	0.0017994	562.8116265233999	17.432	0.26682	16.821	16.706	16.972	-0.6107					9	5	2	0	0	0	0.6116	1	270	270		49.442	2.9848	1	115370	+		7165	20177	4972	4978	8369	8369					0.04910645150994242
ELSCLPPLPR	10	Unmodified	_ELSCLPPLPR_					0	0	0			REV__nc|ENSG00000149527|O75038-3|PLCH2	REV__nc|ENSG00000149527|O75038-3|PLCH2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	562.810259	1123.60597	0.97984	0.00055146	2.4144	0.0013588	3.3942	0.0019103	562.8115524950313	17.369	0.36333	16.886	16.672	17.035	-0.48256	0.032624	-0.0001423	NaN	49.442	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132560	+		7166	20177	4972	4978							0.04910645150994242
ELSCLPPLPR	10	Unmodified	_ELSCLPPLPR_					0	0	0			REV__nc|ENSG00000149527|O75038-3|PLCH2	REV__nc|ENSG00000149527|O75038-3|PLCH2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	562.810259	1123.60597	0.62688	0.00035281	2.5703	0.0014466	3.1972	0.0017994	562.8116265233999	17.432	0.26682	16.821	16.706	16.972	-0.6107	-0.032624	3.3261E-05	NaN	49.442	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115370	+		7167	20177	4972	4978							0.04910645150994242
ELSDEFLVLSK	11	Unmodified	_ELSDEFLVLSK_					0	0	0			REV__nc|ENSG00000182010|Q8IZC4-2|RTKN2	REV__nc|ENSG00000182010|Q8IZC4-2|RTKN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3466796875	2	640.342643	1278.67073	1.7833	0.0011419	4.2444	0.0027178	6.0276	0.0038598	640.3453874628556	103.41	0.76866	103.63	103.42	104.19	0.22556					52	18	4	0	0	0	0.61369	1	12581	12581		42.864	8.6917	1	7100500	+		7168	30075	4973	4979	8370	8370					0.04254498437990151
ELSDRKSRLPP	11	Unmodified	_ELSDRKSRLPP_					0	0	0			REV__nc|ENSG00000174485|Q7Z401|DENND4A	REV__nc|ENSG00000174485|Q7Z401|DENND4A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	649.3646850585938	2	649.364776	1296.715	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.012	1	67.138	66.638	67.638	0.12649								0	0	0	0.56276	1	5975	5975		29.17	1.0886	1		+		7169	21997	4974	4980	8371	8371					0.07850947374845418
ELSELVLMSL	10	Unmodified	_ELSELVLMSL_					0	0	0			REV__nc|ENSG00000239857|Q7L5D6-2|GET4	REV__nc|ENSG00000239857|Q7L5D6-2|GET4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3298950195312	2	567.309758	1132.60496	1.851	0.0010501	-2.3842	-0.0013526	-0.5332	-0.00030249	567.3100774756076	92.839	0.74684	92.774	92.417	93.164	-0.06414					31	17	3	0	0	0	0.37624	1	9826	9826		19.997	0	1	182700	+		7170	23807	4975	4981	8372	8372					0.04396385991435636
ELSEPNPEL	9	Unmodified	_ELSEPNPEL_					0	0	0			REV__nc|ENSG00000100644|Q16665-2|HIF1A	REV__nc|ENSG00000100644|Q16665-2|HIF1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.2495727539062	2	514.250754	1026.48696	0.1671	8.5929E-05	-0.65558	-0.00033713	-0.48848	-0.0002512	514.2504027151645	67.061	0.69406	67.612	67.246	67.941	0.55071					35	20	2	0	0	0	0.6204	1	7369	7369		45.972	0	1	383400	+		7171	17211	4976	4982	8373	8373					-0.025228502728623425
ELSEPNPEL	9	Unmodified	_ELSEPNPEL_					0	0	0			REV__nc|ENSG00000100644|Q16665-2|HIF1A	REV__nc|ENSG00000100644|Q16665-2|HIF1A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	514.250754	1026.48696	0.84915	0.00043667	-1.0294	-0.00052936	-0.18024	-9.2689E-05	514.2502001910262	67.096	0.78476	67.481	67.123	67.908	0.38515	-0.065514	-0.00023693	NaN	45.972	44	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	279100	+		7172	17211	4976	4982							-0.025228502728623425
ELSEPNPEL	9	Unmodified	_ELSEPNPEL_					0	0	0			REV__nc|ENSG00000100644|Q16665-2|HIF1A	REV__nc|ENSG00000100644|Q16665-2|HIF1A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	514.250754	1026.48696	0.1671	8.5929E-05	-0.65558	-0.00033713	-0.48848	-0.0002512	514.2504027151645	67.061	0.69406	67.612	67.246	67.941	0.55071	0.065514	0.00014753	NaN	45.972	35	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	383400	+		7173	17211	4976	4982							-0.025228502728623425
ELSEPVLG	8	Unmodified	_ELSEPVLG_					0	0	0		ENSG00000154767|ENST00000285021|XPC	ENSG00000154767|ENST00000285021|XPC	ENSG00000154767|ENST00000285021|XPC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2282409667969	2	422.226551	842.438549	-0.18819	-7.946E-05	2.9504	0.0012457	2.7622	0.0011663	422.22774658617425	61.684	0.88657	61.675	61.564	62.45	-0.0094147					63	38	2	0	0	0	0.86791	1	5727	5727		28.254	0	1	445730			7174	5295	4977	4983	8374	8374					0.011027008779251446
ELSEVLKARHK	11	Unmodified	_ELSEVLKARHK_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.256591796875	3	437.257738	1308.75138	-1.8163	-0.00079418	0.93317	0.00040803	-0.8831	-0.00038614	437.2580894693445	99.183	2.5872	99.369	98.322	100.91	0.18581					159	59	3	0	0	0	0.69687	1	10305	10305		32.034	1.895	1	447430			7175	4726	4978	4984	8375	8375					0.10935824271541605
ELSGLLRR	8	Unmodified	_ELSGLLRR_					0	0	0			REV__nc|ENSG00000058453|Q5TZA2-2|CROCC	REV__nc|ENSG00000058453|Q5TZA2-2|CROCC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2893371582031	2	472.287808	942.561064	2.1469	0.001014	-2.0547	-0.00097039	0.092286	4.3586E-05	472.2867264071782	114.66	1.2655	114.67	114.37	115.64	0.0094528					102	61	2	0	0	0	0.884	1	13804	13804		33.516	1.5607	1	83672	+		7176	16437	4979	4985	8376	8376					0.08748582400005489
ELSGLLRR	8	Unmodified	_ELSGLLRR_					0	0	0			REV__nc|ENSG00000058453|Q5TZA2-2|CROCC	REV__nc|ENSG00000058453|Q5TZA2-2|CROCC	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	472.287808	942.561064	0.77553	0.00036627	-0.76614	-0.00036184	0.0093833	4.4316E-06	472.2873709272633	114.54	0.12201	114.6	114.55	114.68	0.061066	-0.033881	0.0011691	NaN	33.516	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34058	+		7177	16437	4979	4985							0.08748582400005489
ELSKPGVL	8	Unmodified	_ELSKPGVL_					0	0	0		nc|ENSG00000088888|Q7Z434-4|MAVS;ENSG00000088888|ENST00000428216|MAVS	nc|ENSG00000088888|Q7Z434-4|MAVS	nc|ENSG00000088888|Q7Z434-4|MAVS	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.751708984375	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.443	1	76.492	75.992	76.992	0.049194								0	0	0	0.30316	1	7385	7385		42.474	0	1				7178	1599	4980	4986	8377	8377					0.06383284011531032
ELSKTKERDR	10	Unmodified	_ELSKTKERDR_					0	0	0			REV__nc|ENSG00000123200|Q5T200-2|ZC3H13	REV__nc|ENSG00000123200|Q5T200-2|ZC3H13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	631.34716796875	2	631.346583	1260.67861	-0.88454	-0.00055845	2.9622	0.0018702	2.0776	0.0013117	631.3483065134194	44.25	0.8012	44.25	43.938	44.739	0					33	18	3	0	0	0	0.67689	1	3199	3199		49.536	15.614	1	178260	+		7179	18531	4981	4987	8378	8378					0.058700704781585955
ELSKVGGKELL	11	Unmodified	_ELSKVGGKELL_					0	0	0		nc|ENSG00000160208|Q14684-2|RRP1B;ENSG00000160208|ENST00000340648|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.8418579101562	2	586.847896	1171.68124	-1.7562	-0.0010306	0.036251	2.1274E-05	-1.72	-0.0010094	586.8477170020321	43.436	0.4795	44.21	43.984	44.463	0.77379					40	11	4	0	0	0	0.43522	1	3963	3963		56.632	3.6955	1	2449800			7180	5565	4982	4988	8379	8379					0.10226525883126669
ELSKVGGKELL	11	Unmodified	_ELSKVGGKELL_					0	0	0		nc|ENSG00000160208|Q14684-2|RRP1B;ENSG00000160208|ENST00000340648|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	586.847896	1171.68124	-1.3881	-0.00081461	-0.1304	-7.6524E-05	-1.5185	-0.00089114	586.8477688310322	43.671	0.51787	44.122	43.884	44.401	0.45025	-0.044248	-6.2683E-05	NaN	56.632	35	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2123100			7181	5565	4982	4988							0.10226525883126669
ELSLAIVIA	9	Unmodified	_ELSLAIVIA_					0	0	0		nc|ENSG00000188672|P18577-11|RHCE;ENSG00000188672|ENST00000294413|RHCE;nc|ENSG00000188672|P18577-4|RHCE;nc|ENSG00000188672|P18577-10|RHCE;ENSG00000187010|ENST00000328664|RHD	nc|ENSG00000188672|P18577-11|RHCE	nc|ENSG00000188672|P18577-11|RHCE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.7901611328125	2	464.789318	927.564084	0.2474	0.00011499	2.8684	0.0013332	3.1158	0.0014482	464.7904221539816	34.07	1.6806	34.28	33.524	35.204	0.21003					97	40	4	0	0	0	0.7932	1	2531	2531		25.45	1.2474	1	944210			7182	7947	4983	4989	8380	8380					0.09740412734129222
ELSLHGKR	8	Unmodified	_ELSLHGKR_					0	0	0			REV__ENSG00000255587|ENST00000612677|RAB44	REV__ENSG00000255587|ENST00000612677|RAB44	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.24261474609375	2	470.272158	938.529764	-0.12357	-5.811E-05	1.3806	0.00064926	1.257	0.00059115	470.27285602765255	86.216	1.6292	86.271	85.411	87.041	0.055649					55	37	2	0	0	0	0.4196	1	8727	8727		31.955	7.4508	1	83441	+		7183	23901	4984	4990	8381	8381					0.058040093659201375
ELSLKELLRF	10	Unmodified	_ELSLKELLRF_					0	0	0			REV__ENST00000476417.5_1_10:7615057-7659255:-|nuORF	REV__ENST00000476417.5_1_10:7615057-7659255:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.3681030273438	2	624.371538	1246.72852	2.9382	0.0018345	-3.4088	-0.0021283	-0.4706	-0.00029383	624.3693578625849	103.1	0.62045	103.05	102.74	103.36	-0.047005					26	14	2	0	0	0	0.37624	1	11262	11262		31.53	4.8369	1	1620400	+		7184	18533	4985	4991	8382	8382					0.1150280515405484
ELSLRNNRG	9	Unmodified	_ELSLRNNRG_					0	0	0		nc|ENSG00000164591|Q8TDC0-3|MYOZ3;nc|ENSG00000164591|Q8TDC0-2|MYOZ3;ENSG00000164591|ENST00000517768|MYOZ3	nc|ENSG00000164591|Q8TDC0-3|MYOZ3	nc|ENSG00000164591|Q8TDC0-3|MYOZ3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.3059692382812	2	529.788704	1057.56285	1.1839	0.00062721	0.43222	0.00022898	1.6161	0.00085619	529.7887221404204	34.151	0.49643	34.361	34.149	34.646	0.21003					19	11	2	0	0	0	0.20789	1	2486	2486		47.657	16.128	1	152360			7185	5977	4986	4992	8383	8383					0.03637591417941621
ELSLTKSKDQ	10	Unmodified	_ELSLTKSKDQ_					0	0	0			REV__ENSG00000081791|ENST00000432126|DELE1	REV__ENSG00000081791|ENST00000432126|DELE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2667236328125	2	574.81151	1147.60847	-0.16094	-9.251E-05	-4.2826	-0.0024617	-4.4435	-0.0025542	574.8089665932436	73.994	0.67975	74.552	74.241	74.921	0.55891					26	15	2	0	0	0	0.37624	1	8369	8369		49.536	0	1	205420	+		7186	16825	4987	4993	8384	8384					0.04056772089666083
ELSLVTHAL	9	Unmodified	_ELSLVTHAL_					0	0	0		nc|ENSG00000137411|Q5ST30-2|VARS2;ENST00000469358.5_1_6:30889720-30893984:+|nuORF;ENST00000477288.5_1_6:30884740-30893984:+|nuORF;nc|ENSG00000137411|Q5ST30-3|VARS2;ENSG00000137411|ENST00000676266|VARS2;nc|ENSG00000137411|Q5ST30-4|VARS2	nc|ENSG00000137411|Q5ST30-2|VARS2	nc|ENSG00000137411|Q5ST30-2|VARS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79827880859375	2	491.782025	981.549496	-0.022146	-1.0891E-05	0.37508	0.00018446	0.35293	0.00017357	491.7819409897417	50.275	0.86578	50.723	50.307	51.173	0.44761					50	20	4	0	0	0	0.20789	1	4982	4982		30.504	8.5438	1	1878200			7187	4197	4988	4994	8385	8385					0.057983405859772574
ELSMADLI	8	Unmodified	_ELSMADLI_					0	0	0			REV__ENSG00000158023|ENST00000288912|CFAP251	REV__ENSG00000158023|ENST00000288912|CFAP251	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	446.2283630371094	2	446.228236	890.44192	-0.096259	-4.2954E-05	-1.128	-0.00050333	-1.2242	-0.00054628	446.22811430238283	66.942	1.4514	67.327	66.697	68.149	0.38515					78	40	3	0	0	0	0.9159	1	7306	7306		44.531	0.90502	1	1115400	+		7188	20581	4989	4995	8386	8386					-0.007683723397235553
ELSMVGQASI	10	Oxidation (M)	_ELSM(Oxidation (M))VGQASI_		ELSM(1)VGQASI		ELSM(56)VGQASI	0	0	1		ENSG00000171316|ENST00000423902|CHD7	ENSG00000171316|ENST00000423902|CHD7	ENSG00000171316|ENST00000423902|CHD7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7595825195312	2	525.760432	1049.50631	0.28993	0.00015243	-3.1573	-0.00166	-2.8673	-0.0015075	525.7592376198838	83.156	1.1199	83.611	83.112	84.232	0.45555					86	26	5	0	0	0	0.49268	1	9698	9698		56.434	6.9922	1	697920			7189	6658	4990	4996	8387	8387		112			-0.016462172535739228
ELSPGELV	8	Unmodified	_ELSPGELV_					0	0	0		ENSG00000171450|ENST00000302625|CDK5R2	ENSG00000171450|ENST00000302625|CDK5R2	ENSG00000171450|ENST00000302625|CDK5R2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.22900390625	2	422.226551	842.438549	-0.18819	-7.946E-05	2.9504	0.0012457	2.7622	0.0011663	422.22774658617425	61.684	0.88657	61.675	61.564	62.45	-0.0094147					63	38	2	0	0	0	0.86288	1	5762	5762		26.796	0	1	445730			7190	6664	4991	4997	8388	8388					0.011027008779251446
ELSPGELV	8	Unmodified	_ELSPGELV_					0	0	0		ENSG00000171450|ENST00000302625|CDK5R2	ENSG00000171450|ENST00000302625|CDK5R2	ENSG00000171450|ENST00000302625|CDK5R2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.227294921875	2	422.226551	842.438549	-0.09321	-3.9356E-05	3.1853	0.0013449	3.0921	0.0013056	422.22779141825134	61.484	1.5469	62.037	61.445	62.992	0.55386					58	39	2	0	0	0	0.85277	1	6587	6587		25.45	0	1	212920			7191	6664	4991	4997	8389	8389					0.011027008779251446
ELSPGELV	8	Unmodified	_ELSPGELV_					0	0	0		ENSG00000171450|ENST00000302625|CDK5R2	ENSG00000171450|ENST00000302625|CDK5R2	ENSG00000171450|ENST00000302625|CDK5R2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	422.226551	842.438549	-1.5601	-0.00065871	4.5534	0.0019226	2.9933	0.0012638	422.22847501453174	62.082	0.72832	62.082	61.697	62.425	0	0.043627	0.000798	NaN	25.45	50	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96631			7192	6664	4991	4997							0.011027008779251446
ELSPGHSTLF	10	Unmodified	_ELSPGHSTLF_					0	0	0		ENST00000372070.7_1_1:46016755-46018203:+|nuORF;ENST00000496999.5_1_1:46016755-46032693:+|nuORF	ENST00000372070.7_1_1:46016755-46018203:+|nuORF	ENST00000372070.7_1_1:46016755-46018203:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.1622924804688	2	544.274564	1086.53457	-1.5119	-0.00082291	1.8948	0.0010313	0.38289	0.0002084	544.2746170181437	48.439	0.56877	48.908	48.466	49.035	0.46941					19	13	3	0	0	0	0.37624	1	4610	4610		25.574	10.709	1	138330			7193	10688	4992	4998	8390	8390					-0.005231512820046191
ELSPNTAPH	9	Unmodified	_ELSPNTAPH_					0	0	0		ENSG00000066926|ENST00000262093|FECH;nc|ENSG00000066926|P22830-2|FECH	ENSG00000066926|ENST00000262093|FECH	ENSG00000066926|ENST00000262093|FECH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.72808837890625	2	483.237981	964.461409	-0.064736	-3.1283E-05	0.20889	0.00010094	0.14415	6.9659E-05	483.2379121365131	74.704	0.69884	75.095	74.829	75.528	0.3911					22	16	2	0	0	0	0.20789	1	8401	8401		49.442	17.912	1	179230			7194	1171	4993	4999	8391	8391					-0.022242800046115008
ELSPWITN	8	Unmodified	_ELSPWITN_					0	0	0		ENST00000466248.1_1_X:9984481-9984610:+|nuORF	ENST00000466248.1_1_X:9984481-9984610:+|nuORF	ENST00000466248.1_1_X:9984481-9984610:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.24212646484375	2	480.245275	958.475997	-0.26606	-0.00012778	-4.4281	-0.0021266	-4.6942	-0.0022544	480.24316227273624	32.835	0.74734	32.78	32.401	33.148	-0.05434					33	17	3	0	0	0	0.89494	1	1988	1988		37.159	5.2042	1	181300			7195	12129	4994	5000	8392	8392					-0.0049020785647826415
ELSRVPGL	8	Unmodified	_ELSRVPGL_					0	0	0			REV__ENST00000478562.1_1_2:171709188-171709395:+|nuORF	REV__ENST00000478562.1_1_2:171709188-171709395:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7801513671875	2	435.75581	869.497067	-1.6263	-0.00070869	1.9125	0.00083337	0.28613	0.00012468	435.7566415003847	39.545	0.84967	39.552	38.942	39.792	0.0065002					34	22	2	0	0	0	0.4196	1	2448	2448		55.504	18.345	1	58156	+		7196	27384	4995	5001	8393	8393					0.05709802243052309
ELSRVPGL	8	Unmodified	_ELSRVPGL_					0	0	0			REV__ENST00000478562.1_1_2:171709188-171709395:+|nuORF	REV__ENST00000478562.1_1_2:171709188-171709395:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78009033203125	2	435.75581	869.497067	0.18239	7.9478E-05	0.35178	0.00015329	0.53417	0.00023277	435.75574739292944	39.38	0.73028	39.468	38.991	39.722	0.088375					27	19	2	0	0	0	0.4196	1	2430	2430		45.952	19.259	1	77683	+		7197	27384	4995	5001	8394	8394					0.05709802243052309
ELSRVPGL	8	Unmodified	_ELSRVPGL_					0	0	0			REV__ENST00000478562.1_1_2:171709188-171709395:+|nuORF	REV__ENST00000478562.1_1_2:171709188-171709395:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801208496094	2	435.75581	869.497067	-0.56665	-0.00024692	1.3016	0.0005672	0.735	0.00032028	435.75617485664526	38.456	0.88431	38.798	38.265	39.149	0.34187					50	21	3	0	0	0	0.4196	1	3169	3169		40.573	23.208	1	495850	+		7198	27384	4995	5001	8395	8395					0.05709802243052309
ELSRVPGL	8	Unmodified	_ELSRVPGL_					0	0	0			REV__ENST00000478562.1_1_2:171709188-171709395:+|nuORF	REV__ENST00000478562.1_1_2:171709188-171709395:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77996826171875	2	435.75581	869.497067	-0.06595	-2.8738E-05	0.60616	0.00026414	0.54021	0.0002354	435.75596695272895	38.323	0.95701	38.845	38.247	39.204	0.52235					45	23	3	0	0	0	0.4196	1	3197	3197		19.997	4.355	1	461780	+		7199	27384	4995	5001	8396	8396					0.05709802243052309
ELSSRQKY	8	Unmodified	_ELSSRQKY_					0	0	0			REV__nc|ENSG00000030419|Q9UKS7-6|IKZF2	REV__nc|ENSG00000030419|Q9UKS7-6|IKZF2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.7677001953125	2	505.766906	1009.51926	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.215	1	21.772	21.272	22.272	-0.44324								0	0	0	0.29816	1	877	877		38.806	3.6054	1		+		7200	16274	4996	5002	8397	8397					0.014879819208204026
ELSTGGAIKVF	11	Unmodified	_ELSTGGAIKVF_					0	0	0			REV__ENST00000566774.1_1_16:68264768-68266536:-|nuORF;REV__nc|ENSG00000103067|Q9H6T0|ESRP2	REV__ENST00000566774.1_1_16:68264768-68266536:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3115234375	2	561.313689	1120.61282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.418	1	58.972	58.472	59.472	0.55323								0	0	0	0.56276	1	6133	6133		49.536	1.8787	1		+		7201	28874;17386	4997	5003	8398	8398					0.05734281303239186
ELSTPPILI	9	Unmodified	_ELSTPPILI_					0	0	0		ENST00000263228.3_1_9:33920018-33920222:+|nuORF	ENST00000263228.3_1_9:33920018-33920222:+|nuORF	ENST00000263228.3_1_9:33920018-33920222:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7962341308594	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.493	1	59.479	58.979	59.979	-0.013729								0	0	0	0.31828	1	5461	5461		24.203	0	1				7202	9457	4998	5004	8399	8399					0.08312395388577443
ELSVISAVL	9	Unmodified	_ELSVISAVL_					0	0	0			REV__nc|ENSG00000127603|O94854|MACF1	REV__nc|ENSG00000127603|O94854|MACF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.77734375	2	465.778951	929.543348	-0.25577	-0.00011913	-2.7145	-0.0012643	-2.9702	-0.0013835	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.74721	1	7974	7974		37.159	0	1	451640	+		7203	29829	4999	5005	8400	8400					0.07575822354476713
ELSVLLLLG	9	Unmodified	_ELSVLLLLG_					0	0	0			REV__ENSG00000130433|ENST00000252729|CACNG6	REV__ENSG00000130433|ENST00000252729|CACNG6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.80499267578125	2	478.804968	955.595384	-0.92452	-0.00044266	3.6659	0.0017552	2.7414	0.0013126	478.80664804898805	39.433	1.9403	39.444	38.3	40.24	0.010708					89	52	2	0	0	0	0.69914	1	2402	2402		40.573	0	1	287670	+		7204	18874	5000	5006	8401	8401					0.11580985768250684
ELSVQLQP	8	Unmodified	_ELSVQLQP_					0	0	0		nc|ENSG00000161847|Q8IY67|RAVER1;ENST00000592208.5_1_19:10433104-10439782:-|nuORF;nc|ENSG00000161847|Q8IY67-2|RAVER1;ENSG00000161847|ENST00000617231|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30047607421875	2	457.2531	912.491647	0.20988	9.5968E-05	3.5067	0.0016035	3.7166	0.0016994	457.2547370587079	39.655	0.23031	39.744	39.611	39.841	0.088371					6	5	2	0	0	0	0.4196	1	2447	2447		29.15	6.1071	1	28075			7205	15042	5001	5007	8402	8402					0.031900786605774556
ELTALQPQLIL	11	Unmodified	_ELTALQPQLIL_					0	0	0		ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8692626953125	2	619.871371	1237.72819	-0.30632	-0.00018988	-3.1219	-0.0019352	-3.4283	-0.0021251	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.70737	1	9733	9733		30.318	2.2362	1	2103100			7206	5483	5002	5008	8403	8403					0.11883385434248339
ELTALQPQLIL	11	Unmodified	_ELTALQPQLIL_					0	0	0		ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8693237304688	2	619.871371	1237.72819	0.85836	0.00053207	-4.1806	-0.0025915	-3.3223	-0.0020594	619.8686410709195	93.975	2.8634	94.136	92.286	95.15	0.16119					249	68	4	0	0	0	0.55601	1	9527	9527		47.96	2.0076	1	2724800			7207	5483	5002	5008	8404	8404					0.11883385434248339
ELTALQPQLIL	11	Unmodified	_ELTALQPQLIL_					0	0	0		ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8692016601562	2	619.871371	1237.72819	-1.2246	-0.00075909	-1.8945	-0.0011743	-3.1191	-0.0019334	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.73893	1	9946	9946		24.519	0	1	6224400			7208	5483	5002	5008	8405	8405					0.11883385434248339
ELTAPVIGT	9	Unmodified	_ELTAPVIGT_					0	0	0			REV__HAL1_dup21739|chr20:4024584-4025416:+|1.1559220623866735|0.1385400223363406|3.06|63.0|6|1|sense	REV__HAL1_dup21739|chr20:4024584-4025416:+|1.1559220623866735|0.1385400223363406|3.06|63.0|6|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7544860839844	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.78058	1	7914	7914		30.504	5.0535	1	394230	+		7209	29430	5003	5009	8406	8406					0.04262962803340997
ELTAPVIGT	9	Unmodified	_ELTAPVIGT_					0	0	0			REV__HAL1_dup21739|chr20:4024584-4025416:+|1.1559220623866735|0.1385400223363406|3.06|63.0|6|1|sense	REV__HAL1_dup21739|chr20:4024584-4025416:+|1.1559220623866735|0.1385400223363406|3.06|63.0|6|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7542724609375	2	450.755475	899.496398	0.64847	0.0002923	-3.528	-0.0015903	-2.8795	-0.001298	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.58151	1	7767	7767		47.916	0	1	162850	+		7210	29430	5003	5009	8407	8407					0.04262962803340997
ELTAPVIGT	9	Unmodified	_ELTAPVIGT_					0	0	0			REV__HAL1_dup21739|chr20:4024584-4025416:+|1.1559220623866735|0.1385400223363406|3.06|63.0|6|1|sense	REV__HAL1_dup21739|chr20:4024584-4025416:+|1.1559220623866735|0.1385400223363406|3.06|63.0|6|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7544860839844	2	450.755475	899.496398	-1.4711	-0.00066312	-1.5388	-0.00069364	-3.01	-0.0013568	450.7547246648738	79.827	2.1578	79.926	78.179	80.337	0.098701					99	70	2	0	0	0	0.74721	1	7449	7449		37.159	2.9866	1	155440	+		7211	29430	5003	5009	8408	8408					0.04262962803340997
ELTFSEIQLLI	11	Unmodified	_ELTFSEIQLLI_					0	0	0		ENST00000235290.7_1_13:50617913-50617979:-|nuORF	ENST00000235290.7_1_13:50617913-50617979:-|nuORF	ENST00000235290.7_1_13:50617913-50617979:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7100830078125	3	435.914866	1304.72277	-1.043	-0.00045466	-0.88226	-0.00038459	-1.9253	-0.00083925	435.9143947247465	31.064	0.39572	31.144	30.945	31.341	0.079834					14	8	2	0	0	0	0.17484	1	2063	2063		19.263	0	1	59841			7212	9230	5004	5010	8409	8409					0.0825966185177549
ELTHIFTLVF	10	Unmodified	_ELTHIFTLVF_					0	0	0			REV__ENSG00000130827|ENST00000369682|PLXNA3	REV__ENSG00000130827|ENST00000369682|PLXNA3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2587890625	3	407.228897	1218.66486	-1.85	-0.00075336	-0.12308	-5.0122E-05	-1.9731	-0.00080348	407.22899196345736	68.502	0.49765	68.637	68.434	68.932	0.13522					31	19	2	0	0	0	0.37624	1	6189	6189		16.717	0	1	88012	+		7213	18914	5005	5011	8410	8410					0.06427444716996433
ELTIISIVS	9	Unmodified	_ELTIISIVS_					0	0	0			REV__chr4:73161348-73163302|18|10.89|0.63|4.1|-|0|ANKRD17,None|1	REV__chr4:73161348-73163302|18|10.89|0.63|4.1|-|0|ANKRD17,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7904052734375	2	487.792058	973.569563	0.64551	0.00031488	-3.596	-0.0017541	-2.9505	-0.0014392	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.78058	1	8319	8319		30.504	2.4222	1	1929300	+		7214	15838	5006	5012	8411	8411					0.08172091525966607
ELTKGLFQCIK	11	Unmodified	_ELTKGLFQCIK_					0	0	0			REV__ENSG00000105398|ENST00000222002|SULT2A1	REV__ENSG00000105398|ENST00000222002|SULT2A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.359130859375	2	640.357573	1278.70059	2.419	0.001549	-0.44244	-0.00028332	1.9765	0.0012657	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.7144	1	10774	10774		29.17	0	1	625580	+		7215	17536	5007	5013	8412	8412					0.07239158902348208
ELTKNKAYI	9	Unmodified	_ELTKNKAYI_					0	0	0		ENST00000462139.1_1_1:247462914-247463100:-|nuORF	ENST00000462139.1_1_1:247462914-247463100:-|nuORF	ENST00000462139.1_1_1:247462914-247463100:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.3104248046875	2	540.308406	1078.60226	0.052439	2.8333E-05	0.56447	0.00030499	0.61691	0.00033332	540.3083029892676	74.824	0.59243	74.949	74.623	75.216	0.12545					33	15	3	0	0	0	0.69624	1	6914	6914		40.778	1.5253	1	129190			7216	12037	5008	5014	8413	8413					0.06610298648797652
ELTKYKQREV	10	Unmodified	_ELTKYKQREV_					0	0	0			REV__ENST00000478112.1_1_10:71211350-71243770:+|nuORF	REV__ENST00000478112.1_1_10:71211350-71243770:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5979309082031	3	431.910227	1292.70885	2.7175	0.0011737	-0.40731	-0.00017592	2.3102	0.00099781	432.2434985016779	107.54	0.21153	107.51	107.38	107.6	-0.031487					6	4	2	0	0	0	0.37624	1	11925	11925		18.531	5.5736	1	29978	+		7217	17087	5009	5015	8414	8414					0.07420429143326146
ELTLSLSYNS	10	Unmodified	_ELTLSLSYNS_					0	0	0			REV__ENSG00000095203|ENST00000374566|EPB41L4B	REV__ENSG00000095203|ENST00000374566|EPB41L4B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.7770385742188	2	563.784961	1125.55537	0.37052	0.00020889	-1.4521	-0.00081869	-1.0816	-0.00060979	563.7839899124332	52.648	0.4576	53.262	52.95	53.408	0.61436					15	10	2	0	0	0	0.37624	1	5302	5302		29.17	4.6509	1	153680	+		7218	17054	5010	5016	8415	8415					-0.002386056929935876
ELTPRELV	8	Unmodified	_ELTPRELV_					0	0	0			REV__ENST00000540534.5_1_20:62271485-62272211:-|nuORF	REV__ENST00000540534.5_1_20:62271485-62272211:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.80255126953125	2	478.7742	955.533846	0.091785	4.3945E-05	-2.0936	-0.0010024	-2.0018	-0.00095842	478.7730983745554	50.407	0.20409	51.158	51.08	51.284	0.75174					8	4	2	0	0	0	0.4196	1	4982	4982		11.511	0.64546	1	103340	+		7219	28465	5011	5017	8416	8416					0.0543005406894963
ELTPWIPVIA	10	Unmodified	_ELTPWIPVIA_					0	0	0		nc|ENSG00000155275|Q8IYL2-2|TRMT44;ENST00000532477.1_1_4:8456189-8477725:+|nuORF;ENSG00000155275|ENST00000389737|TRMT44;nc|ENSG00000155275|Q8IYL2-3|TRMT44	nc|ENSG00000155275|Q8IYL2-2|TRMT44	nc|ENSG00000155275|Q8IYL2-2|TRMT44	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.8255004882812	2	569.828975	1137.6434	0.46016	0.00026221	-1.2806	-0.00072974	-0.82047	-0.00046753	569.8280133857369	58.984	0.59415	59.537	59.215	59.809	0.55323					23	14	2	0	0	0	0.37624	1	6192	6192		10.866	0	1	314320			7220	5319	5012	5018	8417	8417					0.08008059688290814
ELTQLAKRHL	10	Unmodified	_ELTQLAKRHL_					0	0	0			REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8588256835938	2	604.859129	1207.70371	0.22273	0.00013472	-1.1358	-0.00068697	-0.91302	-0.00055225	604.8583327420461	82.105	1.1205	82.531	81.753	82.873	0.42645					96	27	4	0	0	0	0.69342	2	9398	9398;9512		32.812	1.1781	1	3330300	+		7221	16563	5013	5019	8418;8419	8418					0.10816170071393572
ELTQLAKRHL	10	Unmodified	_ELTQLAKRHL_					0	0	0			REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.85888671875	2	604.859129	1207.70371	0.012057	7.2928E-06	-0.97821	-0.00059168	-0.96615	-0.00058438	604.8584425211963	80.105	0.71658	80.632	80.233	80.949	0.52676					43	16	3	0	0	0	0.60066	1	9248	9248		45.972	6.7194	1	1113700	+		7222	16563	5013	5019	8420	8420					0.10816170071393572
ELTQLAKRHL	10	Unmodified	_ELTQLAKRHL_					0	0	0			REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8592529296875	2	604.859129	1207.70371	0.082073	4.9642E-05	-1.0653	-0.00064433	-0.98318	-0.00059469	604.8584757159402	82.084	1.3276	82.558	81.718	83.045	0.47383					56	29	2	0	0	0	0.63899	2	9437	9437;9450		27.882	1.7347	1	3105600	+		7223	16563	5013	5019	8421;8422	8421					0.10816170071393572
ELTRGRHDLP	10	Unmodified	_ELTRGRHDLP_					0	0	0			REV__nc|ENSG00000244731|P0C0L4-2|C4A	REV__nc|ENSG00000244731|P0C0L4-2|C4A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.2709350585938	2	597.322911	1192.63127	-0.23149	-0.00013827	-2.9352	-0.0017533	-3.1667	-0.0018916	597.3210384648314	57.977	0.8201	57.961	57.593	58.413	-0.01643					79	37	3	0	0	0	0.37624	1	4884	4884		47.96	8.7067	1	224260	+		7224	23731	5014	5020	8423	8423					0.04265835997807699
ELTRLLPLRFV	11	Unmodified	_ELTRLLPLRFV_					0	0	0		ENSG00000162771|ENST00000294829|GARIN4	ENSG00000162771|ENST00000294829|GARIN4	ENSG00000162771|ENST00000294829|GARIN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.94842529296875	3	452.950245	1355.82891	-0.13654	-6.1846E-05	-3.9622	-0.0017947	-4.0988	-0.0018565	452.9483614950571	107.37	0.93114	107.33	106.73	107.66	-0.034409					72	21	5	0	0	0	0.69687	1	11663	11663		32.034	5.9707	1	2765200			7225	5734	5015	5021	8424	8424					0.1652246220771758
ELTRLLPLRFV	11	Unmodified	_ELTRLLPLRFV_					0	0	0		ENSG00000162771|ENST00000294829|GARIN4	ENSG00000162771|ENST00000294829|GARIN4	ENSG00000162771|ENST00000294829|GARIN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.9483947753906	3	452.950245	1355.82891	-1.1932	-0.00054047	-3.3468	-0.0015159	-4.54	-0.0020564	452.9486366147782	106.8	1.2296	106.95	106.47	107.7	0.14843					124	29	6	0	0	0	0.74405	1	11488	11488		23.378	1.5975	1	8171700			7226	5734	5015	5021	8425	8425					0.1652246220771758
ELTRLLPLRFV	11	Unmodified	_ELTRLLPLRFV_					0	0	0		ENSG00000162771|ENST00000294829|GARIN4	ENSG00000162771|ENST00000294829|GARIN4	ENSG00000162771|ENST00000294829|GARIN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.9486083984375	3	452.950245	1355.82891	-1.7681	-0.00080086	-2.4977	-0.0011313	-4.2658	-0.0019322	452.9490232633925	106.96	1.0839	107.01	106.56	107.64	0.053757					98	25	5	0	0	0	0.71207	2	11430	11404;11430		29.551	3.659	1	4103500			7227	5734	5015	5021	8426;8427	8427					0.1652246220771758
ELTSILRNSA	10	Unmodified	_ELTSILRNSA_					0	0	0			REV__ENSG00000197299|ENST00000355112|BLM	REV__ENSG00000197299|ENST00000355112|BLM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3055419921875	2	552.306395	1102.59824	-1.4446	-0.00079788	1.6112	0.00088988	0.16659	9.2009E-05	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.64457	1	9469	9469		47.657	0	1	1677300	+		7228	23217	5016	5022	8428	8428					0.051042091551153135
ELTVEFILP	9	Unmodified	_ELTVEFILP_					0	0	0			REV__ENSG00000168038|ENST00000301831|ULK4	REV__ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.7981567382812	2	530.799883	1059.58521	1.4661	0.00077821	1.0158	0.00053917	2.4819	0.0013174	530.8004854183959	89.778	0.62534	90.229	89.944	90.57	0.45058					31	17	2	0	0	0	0.43338	2	10613	10613;10629		55.504	5.4411	1	1082800	+		7229	21454	5017	5023	8429;8430	8429					0.0578037804300493
ELTVEFILP	9	Unmodified	_ELTVEFILP_					0	0	0			REV__ENSG00000168038|ENST00000301831|ULK4	REV__ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.798583984375	2	530.799883	1059.58521	-1.4931	-0.00079255	4.3617	0.0023152	2.8686	0.0015226	530.8024048207582	89.891	0.75801	90.361	89.972	90.73	0.47068					39	19	3	0	0	0	0.58151	1	10648	10648		47.916	1.9434	1	1102000	+		7230	21454	5017	5023	8431	8431					0.0578037804300493
ELVARTIHVR	10	Unmodified	_ELVARTIHVR_					0	0	0			REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000172915|Q8NFP9|NBEA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.3584594726562	2	597.359296	1192.70404	-0.56757	-0.00033904	-1.0155	-0.00060663	-1.5831	-0.00094568	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.86587	1	10654	10654		29.17	4.6509	1	3951300	+		7231	21863	5018	5024	8432	8432					0.11539589791209437
ELVAVEYLPQA	11	Unmodified	_ELVAVEYLPQA_					0	0	0			REV__ENSG00000113205|ENST00000231130|PCDHB3	REV__ENSG00000113205|ENST00000231130|PCDHB3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	617.2999877929688	2	616.332079	1230.6496	1.4654	0.00090316	-1.8597	-0.0011462	-0.39436	-0.00024306	616.3311495081188	50.779	0.41078	51.53	51.366	51.777	0.75174					15	9	2	0	0	0	0.1728	1	5018	5018		31.53	3.6476	1	198620	+		7232	17981	5019	5025	8433	8433					0.043505331291498806
ELVCEGSS	8	Unmodified	_ELVCEGSS_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.1798095703125	2	412.178743	822.342934	-0.4035	-0.00016631	2.9076	0.0011984	2.5041	0.0010321	412.17981115157295	19.175	0.5284	19.101	18.868	19.396	-0.073704					27	13	3	0	0	0	0.89962	1	396	396		38.806	1.7777	1	101880	+		7233	18431	5020	5026	8434	8434					-0.0753439530462856
ELVCEGSS	8	Unmodified	_ELVCEGSS_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	412.178743	822.342934	-2.1639	-0.00089193	4.4681	0.0018417	2.3042	0.00094974	412.18049818667174	19.069	0.37453	19.069	18.834	19.208	0	-0.014306	0.0021645	NaN	38.806	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17145	+		7234	18431	5020	5026							-0.0753439530462856
ELVCEGSS	8	Unmodified	_ELVCEGSS_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	412.178743	822.342934	-0.4035	-0.00016631	2.9076	0.0011984	2.5041	0.0010321	412.17981115157295	19.175	0.5284	19.101	18.868	19.396	-0.073704	0.017632	0.00087802	NaN	38.806	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101880	+		7235	18431	5020	5026							-0.0753439530462856
ELVCEGSS	8	Unmodified	_ELVCEGSS_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	412.178743	822.342934	-1.9386	-0.00079903	4.1826	0.001724	2.244	0.00092493	412.1802744796957	19.031	0.39907	19.074	18.914	19.313	0.043749	-0.0092227	0.0019291	NaN	38.806	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47661	+		7236	18431	5020	5026							-0.0753439530462856
ELVCEGSS	8	Unmodified	_ELVCEGSS_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	412.178743	822.342934	0.012696	5.2331E-06	2.2463	0.00092587	2.259	0.0009311	412.1795211987799	18.85	0.38406	18.916	18.797	19.181	0.066298	-0.16776	0.00033289	NaN	38.806	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59544	+		7237	18431	5020	5026							-0.0753439530462856
ELVCEGSS	8	Unmodified	_ELVCEGSS_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	412.178743	822.342934	0.47028	0.00019384	1.6743	0.00069012	2.1446	0.00088396	412.17937009524036	18.963	0.32518	18.94	18.784	19.109	-0.023344	-0.14362	-0.00013862	NaN	38.806	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42591	+		7238	18431	5020	5026							-0.0753439530462856
ELVCEGSS	8	Unmodified	_ELVCEGSS_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	412.178743	822.342934	1.4733	0.00060726	1.3878	0.00057204	2.8611	0.0011793	412.179205652946	19.702	0.61019	19.232	18.974	19.584	-0.46967	0.14872	-0.00037477	NaN	38.806	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56693	+		7239	18431	5020	5026							-0.0753439530462856
ELVCEGSS	8	Unmodified	_ELVCEGSS_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	412.178743	822.342934	0.062316	2.5685E-05	2.5487	0.0010505	2.611	0.0010762	412.17970329612734	19.904	0.78009	19.274	18.847	19.627	-0.6296	0.19033	0.00058215	NaN	38.806	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72246	+		7240	18431	5020	5026							-0.0753439530462856
ELVGPTQLAPS	11	Unmodified	_ELVGPTQLAPS_					0	0	0		nc|nan|Q9UFG5-2|C19orf25	nc|nan|Q9UFG5-2|C19orf25	nc|nan|Q9UFG5-2|C19orf25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.3028564453125	2	556.303321	1110.59209	-0.51504	-0.00028652	-0.18595	-0.00010345	-0.70099	-0.00038996	556.3031289934069	44.609	0.93458	45.073	44.578	45.513	0.46313					57	22	3	0	0	0	0.59499	1	4119	4119		45.022	0.64502	1	3680800			7241	15377	5021	5027	8435	8435					0.04121690923557253
ELVGVEKT	8	Unmodified	_ELVGVEKT_					0	0	0			REV__ENST00000477155.5_1_1:42938911-42948338:+|nuORF	REV__ENST00000477155.5_1_1:42938911-42948338:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7707824707031	2	437.74765	873.480748	0.17319	7.5814E-05	0.10227	4.477E-05	0.27547	0.00012058	437.7475840656909	37.922	1.109	38.016	37.618	38.727	0.094322					60	38	2	0	0	0	0.4196	1	2240	2240		7.1934	3.7833	1	113350	+		7242	27348	5022	5028	8436	8436					0.03894676286279264
ELVIANYSA	9	Unmodified	_ELVIANYSA_					0	0	0			REV__ENSG00000182415|ENST00000250838|CDY2A	REV__ENSG00000182415|ENST00000250838|CDY2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.2575988769531	2	490.258382	978.502212	1.5736	0.00077149	-2.2967	-0.001126	-0.72311	-0.00035451	490.25714425919216	107.1	2.1346	107.2	105.77	107.9	0.10396					168	84	3	0	0	0	0.66686	1	13028	13028		42.864	12.361	1	1431500	+		7243	18836	5023	5029	8437	8437					0.012100613149982564
ELVILGAIV	9	Unmodified	_ELVILGAIV_					0	0	0			REV__ENSG00000126261|ENST00000246548|UBA2	REV__ENSG00000126261|ENST00000246548|UBA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.7994079589844	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.7932	1	3689	3689		18.324	0.95945	1	251610	+		7244	18699	5024	5030	8438	8438					0.11905003113815837
ELVKIQKH	8	Unmodified	_ELVKIQKH_					0	0	0		nc|ENSG00000091128|A4D0S4-3|LAMB4;ENSG00000091128|ENST00000388781|LAMB4	nc|ENSG00000091128|A4D0S4-3|LAMB4	nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2777099609375	2	497.805834	993.597115	0.0055492	2.7624E-06	-1.9188	-0.00095521	-1.9133	-0.00095244	497.80479582791173	66.777	1.0579	67.162	66.85	67.908	0.38515					52	30	2	0	0	0	0.4196	1	7341	7341		35.618	11.416	1	235310			7245	1666	5025	5031	8439	8439					0.10006039576865078
ELVKKCKI	8	Unmodified	_ELVKKCKI_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.8014221191406	2	480.799163	959.583773	-0.79098	-0.0003803	4.1385	0.0019898	3.3475	0.0016095	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.90465	1	9961	9961		40.573	7.057	1	18644000			7246	3510	5026	5032	8440	8440					0.10236465473246881
ELVKLLGP	8	Unmodified	_ELVKLLGP_					0	0	0			REV__ENSG00000179820|ENST00000391770|MYADM	REV__ENSG00000179820|ENST00000391770|MYADM	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2991943359375	2	434.778754	867.542954	-1.3509	-0.00058734	4.469	0.001943	3.1181	0.0013557	434.78076966237774	76.312	0.51804	76.312	76.164	76.682	0					27	20	2	0	0	0	0.4196	1	6930	6930		20.482	0	1	64584	+		7247	22357	5027	5033	8441	8441					0.10388447425305003
ELVKLLGP	8	Unmodified	_ELVKLLGP_					0	0	0			REV__ENSG00000179820|ENST00000391770|MYADM	REV__ENSG00000179820|ENST00000391770|MYADM	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3000793457031	2	434.778754	867.542954	-0.16751	-7.2832E-05	3.9078	0.001699	3.7403	0.0016262	434.7803657126332	72.126	0.75476	72.163	71.791	72.546	0.037148					39	28	2	0	0	0	0.4196	1	6809	6809		42.474	8.9589	1	98940	+		7248	22357	5027	5033	8442	8442					0.10388447425305003
ELVLDPSIGGE	11	Unmodified	_ELVLDPSIGGE_					0	0	0			REV__ENSG00000158292|ENST00000377893|GPR153	REV__ENSG00000158292|ENST00000377893|GPR153	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.7932739257812	2	564.792786	1127.57102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.977	1	61.366	60.866	61.866	0.38945								0	0	0	0.56276	1	6492	6492		45.972	5.1941	1		+		7249	20600	5028	5034	8443	8443					0.012336808240434038
ELVLENAGLRT	11	Unmodified	_ELVLENAGLRT_					0	0	0		nc|ENSG00000079691|Q5VZK9-3|CARMIL1;nc|ENSG00000079691|Q5VZK9-2|CARMIL1;ENSG00000079691|ENST00000329474|CARMIL1;ENST00000497227.1_1_6:25466074-25472787:+|nuORF;nc|ENSG00000079691|Q5VZK9-4|CARMIL1	nc|ENSG00000079691|Q5VZK9-3|CARMIL1;nc|ENSG00000079691|Q5VZK9-4|CARMIL1	nc|ENSG00000079691|Q5VZK9-4|CARMIL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.899169921875	3	405.562827	1213.66665	1.5319	0.00062128	3.2091	0.0013015	4.741	0.0019228	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.732	1	5936	5936		18.332	3.5529	1	245170			7250	1426;14788	5029	5035	8444	8444					0.0683645373494528
ELVLLGEPL	9	Unmodified	_ELVLLGEPL_					0	0	0		ENSG00000174839|ENST00000311128|DENND6A	ENSG00000174839|ENST00000311128|DENND6A	ENSG00000174839|ENST00000311128|DENND6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79571533203125	2	491.794601	981.574648	0.09879	4.8585E-05	2.3098	0.001136	2.4086	0.0011846	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.7932	1	4089	4089		24.203	0	1	1349600			7251	6967	5030	5036	8445	8445					0.08312395388577443
ELVLLGEPL	9	Unmodified	_ELVLLGEPL_					0	0	0		ENSG00000174839|ENST00000311128|DENND6A	ENSG00000174839|ENST00000311128|DENND6A	ENSG00000174839|ENST00000311128|DENND6A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7955017089844	2	491.794601	981.574648	0.30701	0.00015099	1.9707	0.0009692	2.2778	0.0011202	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.72402	1	3509	3509		38.806	8.3025	1	3201400			7252	6967	5030	5036	8446	8446					0.08312395388577443
ELVLLGEPL	9	Unmodified	_ELVLLGEPL_					0	0	0		ENSG00000174839|ENST00000311128|DENND6A	ENSG00000174839|ENST00000311128|DENND6A	ENSG00000174839|ENST00000311128|DENND6A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7955017089844	2	491.794601	981.574648	-0.25318	-0.00012451	2.5897	0.0012736	2.3365	0.0011491	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.78536	1	3728	3728		29.15	3.6994	1	1502200			7253	6967	5030	5036	8447	8447					0.08312395388577443
ELVLVIGGI	9	Unmodified	_ELVLVIGGI_					0	0	0			REV__nc|ENSG00000135535|Q04900-2|CD164	REV__nc|ENSG00000135535|Q04900-2|CD164	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7929382324219	2	456.791861	911.569169	0.032056	1.4643E-05	2.9264	0.0013367	2.9584	0.0013514	456.7930672355845	37.708	1.0507	37.65	37.238	38.288	-0.057915					86	33	4	0	0	0	0.7932	1	2141	2141		20.482	1.1219	1	1430300	+		7254	29865	5031	5037	8448	8448					0.10984716596760791
ELVLVIGGI	9	Unmodified	_ELVLVIGGI_					0	0	0			REV__nc|ENSG00000135535|Q04900-2|CD164	REV__nc|ENSG00000135535|Q04900-2|CD164	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7930908203125	2	456.791861	911.569169	-0.5708	-0.00026074	3.3989	0.0015526	2.8281	0.0012919	456.79332762585267	37.831	1.4155	38.144	37.663	39.079	0.31312					135	35	5	0	0	0	0.7932	1	3124	3124		26.796	1.3459	1	9282000	+		7255	29865	5031	5037	8449	8449					0.10984716596760791
ELVNDEMSSSS	11	Unmodified	_ELVNDEMSSSS_					0	0	0			REV__ENSG00000155754|ENST00000439140|C2CD6	REV__ENSG00000155754|ENST00000439140|C2CD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.2481689453125	2	599.250625	1196.4867	-0.43344	-0.00025974	-2.5037	-0.0015004	-2.9372	-0.0017601	599.2490612325009	45.374	0.60763	45.343	45.06	45.668	-0.031067					31	13	3	0	0	0	0.37012	1	3668	3668		61.691	5.059	1	368110	+		7256	20443	5032	5038	8450	8450					-0.10368638055001611
ELVNKFFY	8	Unmodified	_ELVNKFFY_					0	0	0			REV__nc|ENSG00000244122|Q9HAW7-2|UGT1A7	REV__nc|ENSG00000244122|Q9HAW7-2|UGT1A7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8209838867188	2	530.279118	1058.54368	0.6838	0.0003626	3.5347	0.0018744	4.2185	0.002237	530.2802435589953	84.247	0.38785	84.395	84.258	84.646	0.14793					12	8	2	0	0	0	0.4196	1	8208	8208		13.775	0	1	28407	+		7257	23846	5033	5039	8451	8451					0.01675242074338712
ELVNMILM	8	Unmodified	_ELVNMILM_					0	0	0		ENSG00000113812|ENST00000335754|ACTR8;nc|ENSG00000113812|Q9H981-2|ACTR8	ENSG00000113812|ENST00000335754|ACTR8	ENSG00000113812|ENST00000335754|ACTR8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.7559509277344	2	481.756107	961.49766	-0.58942	-0.00028396	1.5732	0.00075792	0.98382	0.00047396	481.75665787402625	57.408	0.79066	57.392	57.106	57.897	-0.01643					68	40	2	0	0	0	0.87276	1	4888	4888		29.842	0.69198	1	310440			7258	2748	5034	5040	8452	8452					0.015371375762356365
ELVPILGT	8	Unmodified	_ELVPILGT_					0	0	0			REV__nc|ENSG00000102796|A0PJE2-2|DHRS12	REV__nc|ENSG00000102796|A0PJE2-2|DHRS12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.2545471191406	2	421.255111	840.49567	0.58556	0.00024667	-3.0592	-0.0012887	-2.4737	-0.001042	421.25366472055117	84.161	1.6821	84.309	83.832	85.514	0.14794					87	38	3	0	0	0	0.85277	1	8243	8243		25.45	0	1	609670	+		7259	17358	5035	5041	8453	8453					0.0690416815430126
ELVQGALL	8	Unmodified	_ELVQGALL_					0	0	0			REV__ENSG00000175518|ENST00000380184|UBQLNL	REV__ENSG00000175518|ENST00000380184|UBQLNL	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.751953125	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.669	1	76.759	76.259	77.259	0.089363								0	0	0	0.29568	1	7151	7151		35.201	5.3592	1		+		7260	22071	5036	5042	8454	8454					0.06383284011531032
ELVQNILRTK	10	Unmodified	_ELVQNILRTK_					0	0	0			REV__nc|ENSG00000153130|Q9UIL1-3|SCOC	REV__nc|ENSG00000153130|Q9UIL1-3|SCOC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.2471618652344	3	405.24695	1212.71902	1.65	0.00066868	-1.1207	-0.00045416	0.52934	0.00021451	405.24639893952656	23.489	3.066	23.108	22.404	25.47	-0.38178					149	70	4	0	0	0	0.81117	1	1087	1087		38.754	1.1537	1	247320	+		7261	29936	5037	5043	8455	8455					0.12117036868562536
ELVQNILRTK	10	Unmodified	_ELVQNILRTK_					0	0	0			REV__nc|ENSG00000153130|Q9UIL1-3|SCOC	REV__nc|ENSG00000153130|Q9UIL1-3|SCOC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.24688720703125	3	405.24695	1212.71902	1.0635	0.00043097	-0.64433	-0.00026111	0.41915	0.00016986	405.2465768037405	23.434	2.4302	22.86	22.409	24.839	-0.57415					118	56	3	0	0	0	0.42808	1	1022	1022		61.765	13.163	1	383090	+		7262	29936	5037	5043	8456	8456					0.12117036868562536
ELVRPTYRVV	10	Unmodified	_ELVRPTYRVV_					0	0	0			REV__nc|ENSG00000104863|Q9HAP6-2|LIN7B	REV__nc|ENSG00000104863|Q9HAP6-2|LIN7B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	411.2429504394531	3	411.243429	1230.70846	-1.7909	-0.00073651	2.6546	0.0010917	0.86368	0.00035518	411.2443310153243	102.88	0.55746	103.06	102.8	103.36	0.18297					28	13	3	0	0	0	0.86621	1	10846	10846		26.063	0.9956	1	987160	+		7263	17482	5038	5044	8457	8457					0.10233054214108961
ELVRPTYRVV	10	Unmodified	_ELVRPTYRVV_					0	0	0			REV__nc|ENSG00000104863|Q9HAP6-2|LIN7B	REV__nc|ENSG00000104863|Q9HAP6-2|LIN7B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	411.2442932128906	3	411.243429	1230.70846	0.73407	0.00030188	-0.093584	-3.8486E-05	0.64049	0.0002634	411.5776849607496	102.96	0.51617	103.08	102.85	103.37	0.12622					23	12	3	0	0	0	0.86106	1	10856	10856		33.922	8.8538	1	1052600	+		7264	17482	5038	5044	8458	8458					0.10233054214108961
ELVRPTYRVV	10	Unmodified	_ELVRPTYRVV_					0	0	0			REV__nc|ENSG00000104863|Q9HAP6-2|LIN7B	REV__nc|ENSG00000104863|Q9HAP6-2|LIN7B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.2435302734375	3	411.243429	1230.70846	2.5653	0.001055	-1.8951	-0.00077935	0.67023	0.00027563	411.2424876891329	102.75	0.89561	102.98	102.74	103.63	0.22556					34	27	2	0	0	0	0.86409	1	12469	12469		25.126	0	1	2184900	+		7265	17482	5038	5044	8459	8459					0.10233054214108961
ELVRRNTG	8	Unmodified	_ELVRRNTG_					0	0	0		nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD;nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD;nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD;nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD;ENSG00000213672|ENST00000294129|NCKIPSD	nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD	nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7669982910156	2	472.76724	943.519927	-1.568	-0.00074129	1.5546	0.00073498	-0.013349	-6.3108E-06	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.87922	1	7997	7997		31.955	2.8053	1	404330			7266	8599	5039	5045	8460	8460					0.04590821360523023
ELVRSPLV	8	Unmodified	_ELVRSPLV_					0	0	0		nc|ENSG00000095321|P43155-3|CRAT;nc|ENSG00000095321|P43155-2|CRAT;ENSG00000095321|ENST00000318080|CRAT	nc|ENSG00000095321|P43155-3|CRAT	nc|ENSG00000095321|P43155-3|CRAT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7931823730469	2	456.779285	911.544017	-0.39191	-0.00017902	3.1733	0.0014495	2.7814	0.0012705	456.78128206123523	37.548	0.15726	37.861	37.746	37.903	0.31312					5	3	2	0	0	0	0.4196	1	3026	3026		7.1934	0	1	36604			7267	1722	5040	5046	8461	8461					0.08470661794194712
ELVSFVHQP	9	Unmodified	_ELVSFVHQP_					0	0	0			REV__ENST00000461129.5_1_6:126319428-126329623:+|nuORF	REV__ENST00000461129.5_1_6:126319428-126329623:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.8344116210938	2	528.279649	1054.54475	0.42206	0.00022297	0.52208	0.00027581	0.94415	0.00049877	528.2813873207325	30.133	0.21722	30.043	29.875	30.092	-0.089546					5	4	2	0	0	0	0.20789	1	1948	1948		51.335	7.2187	1	36197	+		7268	16526	5041	5047	8462	8462					0.0196545644323578
ELVSLVNW	8	Unmodified	_ELVSLVNW_					0	0	0			REV__ENST00000535789.1_1_11:63437843-63437963:-|nuORF	REV__ENST00000535789.1_1_11:63437843-63437963:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27581787109375	2	480.263468	958.512382	-0.73467	-0.00035283	-3.8064	-0.0018281	-4.5411	-0.0021809	480.26112157765556	16.536	0.10553	16.453	16.395	16.501	-0.083363					6	4	2	0	0	0	0.4196	1	148	148		16.473	0	1	16706	+		7269	28394	5042	5048	8463	8463					0.031466690402339736
ELVSRGRP	8	Unmodified	_ELVSRGRP_					0	0	0		ENST00000561543.5_1_15:52970314-52971190:-|nuORF	ENST00000561543.5_1_15:52970314-52971190:-|nuORF	ENST00000561543.5_1_15:52970314-52971190:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2628173828125	2	457.264333	912.514114	0.21557	9.8573E-05	-0.19878	-9.0895E-05	0.016791	7.678E-06	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.89494	1	7870	7870		37.159	0	1	1366100			7270	13838	5043	5049	8464	8464					0.05435722848869773
ELVVAPLA	8	Unmodified	_ELVVAPLA_					0	0	0			REV__ENSG00000223601|ENST00000422359|EBLN1	REV__ENSG00000223601|ENST00000422359|EBLN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2479553222656	2	406.249829	810.485105	-1.171	-0.0004757	-1.7314	-0.00070337	-2.9023	-0.0011791	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.82464	1	8764	8764		21.702	1.2205	1	30016000	+		7271	23728	5044	5050	8465	8465					0.07228185499843676
ELVVAPLA	8	Unmodified	_ELVVAPLA_					0	0	0			REV__ENSG00000223601|ENST00000422359|EBLN1	REV__ENSG00000223601|ENST00000422359|EBLN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2484436035156	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.80963	1	9179	9179		15.636	0	1	50007000	+		7272	23728	5044	5050	8466	8466					0.07228185499843676
ELVVAPLA	8	Unmodified	_ELVVAPLA_					0	0	0			REV__ENSG00000223601|ENST00000422359|EBLN1	REV__ENSG00000223601|ENST00000422359|EBLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.24798583984375	2	406.249829	810.485105	-1.9277	-0.00078311	-1.0996	-0.00044672	-3.0273	-0.0012298	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.82464	1	8917	8917		21.702	0	1	31099000	+		7273	23728	5044	5050	8467	8467					0.07228185499843676
ELWGYGLLL	9	Unmodified	_ELWGYGLLL_					0	0	0			REV__ENSG00000132681|ENST00000368081|ATP1A4	REV__ENSG00000132681|ENST00000368081|ATP1A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.7943115234375	2	532.294768	1062.57498	0.8033	0.00042759	-3.5435	-0.0018862	-2.7402	-0.0014586	532.2935597479674	66.813	0.36478	67.198	66.961	67.326	0.38515					13	10	2	0	0	0	0.69914	1	7304	7304		40.573	4.1259	1	174840	+		7274	19021	5045	5051	8468	8468					0.04619815108435432
ELWRGKKLVA	10	Unmodified	_ELWRGKKLVA_					0	0	0		nc|ENSG00000099331|Q13459-2|MYO9B;ENSG00000099331|ENST00000682292|MYO9B	nc|ENSG00000099331|Q13459-2|MYO9B	nc|ENSG00000099331|Q13459-2|MYO9B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5804443359375	3	400.580152	1198.71863	3.1805	0.001274	-2.603	-0.0010427	0.57754	0.00023135	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.86225	1	12301	12301		32.751	5.7032	1	4827300			7275	1757	5046	5052	8469	8469					0.12721661939372098
ELWRGKKLVA	10	Unmodified	_ELWRGKKLVA_					0	0	0		nc|ENSG00000099331|Q13459-2|MYO9B;ENSG00000099331|ENST00000682292|MYO9B	nc|ENSG00000099331|Q13459-2|MYO9B	nc|ENSG00000099331|Q13459-2|MYO9B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.580322265625	3	400.580152	1198.71863	3.1807	0.0012741	-2.2259	-0.00089164	0.9548	0.00038247	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.86698	1	12540	12540		28.081	7.2443	1	88404			7276	1757	5046	5052	8470	8470					0.12721661939372098
ELWRVLKP	8	Unmodified	_ELWRVLKP_					0	0	0		nc|ENSG00000164509|Q8NI17-4|IL31RA;nc|ENSG00000164509|Q8NI17-7|IL31RA;nc|ENSG00000164509|Q8NI17-9|IL31RA;nc|ENSG00000164509|Q8NI17-8|IL31RA;nc|ENSG00000164509|Q8NI17-10|IL31RA;nc|ENSG00000164509|Q8NI17-6|IL31RA;nc|ENSG00000164509|Q8NI17-11|IL31RA;nc|ENSG00000164509|Q8NI17-3|IL31RA;nc|ENSG00000164509|Q8NI17-5|IL31RA;nc|ENSG00000164509|Q8NI17|IL31RA;nc|ENSG00000164509|Q8NI17-12|IL31RA;ENSG00000164509|ENST00000652347|IL31RA	nc|ENSG00000164509|Q8NI17-4|IL31RA	nc|ENSG00000164509|Q8NI17-4|IL31RA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.2694702148438	2	520.816202	1039.61785	-0.16509	-8.5983E-05	1.3578	0.00070716	1.1927	0.00062118	520.8169079975031	53.078	1.2046	53.692	53.116	54.321	0.61436					41	28	2	0	0	0	0.4196	1	5446	5446		31.955	0	1	108110			7277	5970	5047	5053	8471	8471					0.09962629956521596
ELYDKIKW	8	Unmodified	_ELYDKIKW_					0	0	0			REV__nc|ENSG00000173821|Q63HN8|RNF213	REV__nc|ENSG00000173821|Q63HN8|RNF213	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.79296875	2	547.797675	1093.5808	-0.48452	-0.00026542	0.6848	0.00037513	0.20028	0.00010971	547.7978234031041	77.336	0.87793	77.741	77.425	78.303	0.40531					32	20	2	0	0	0	0.4196	1	8763	8763		18.324	1.8513	1	238950	+		7278	21953	5048	5054	8472	8472					0.03774913620077314
ELYEDFLGY	9	Unmodified	_ELYEDFLGY_					0	0	0			REV__nc|ENSG00000151572|Q32M45-3|ANO4	REV__nc|ENSG00000151572|Q32M45-3|ANO4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.8025512695312	2	574.760955	1147.50736	-0.4218	-0.00024243	4.1055	0.0023597	3.6837	0.0021173	574.7630090851945	72.376	0.42661	72.336	72.108	72.535	-0.04039					35	16	3	0	0	0	0.20789	1	7078	7078		18.324	0	1	80200	+		7279	20258	5049	5055	8473	8473					-0.06049679613056469
ELYILVMLL	9	Unmodified	_ELYILVMLL_					0	0	0			REV__ENSG00000163485|ENST00000337894|ADORA1	REV__ENSG00000163485|ENST00000337894|ADORA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8302001953125	2	553.830129	1105.6457	-0.44019	-0.00024379	0.88822	0.00049192	0.44802	0.00024813	553.8305183816093	102.73	0.52669	102.73	102.43	102.96	0					32	12	3	0	0	0	0.77546	1	10504	10504		31.955	2.8053	1	456910	+		7280	20921	5050	5056	8474	8474					0.09710772101743714
ELYKHVMRSNY	11	Unmodified	_ELYKHVMRSNY_					0	0	0		ENSG00000197362|ENST00000491431|ZNF786	ENSG00000197362|ENST00000491431|ZNF786	ENSG00000197362|ENST00000491431|ZNF786	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.58270263671875	3	480.57485	1438.70272	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.764	1	30.828	30.328	31.328	0.063122								0	0	0	0.56276	1	1369	1369		24.232	4.9691	1				7281	8157	5051	5057	8475	8475					0.0009158764016774512
ELYPRWHRKRK	11	Unmodified	_ELYPRWHRKRK_					0	0	0			REV__ENSG00000168517|ENST00000589230|HEXIM2	REV__ENSG00000168517|ENST00000589230|HEXIM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.6348266601562	3	523.635542	1567.8848	0.25758	0.00013488	-1.9976	-0.001046	-1.74	-0.00091114	523.6344657480768	45.382	1.3027	45.364	44.968	46.271	-0.018585					106	30	5	0	0	0	0.79476	1	3599	3599		12.433	0	1	2480100	+		7282	21496	5052	5058	8476	8476					0.1235710816788469
ELYPRWHRKRK	11	Unmodified	_ELYPRWHRKRK_					0	0	0			REV__ENSG00000168517|ENST00000589230|HEXIM2	REV__ENSG00000168517|ENST00000589230|HEXIM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.6356811523438	3	523.635542	1567.8848	0.32578	0.00017059	-1.9357	-0.0010136	-1.6099	-0.00084301	523.9689871221619	45.265	0.71391	45.307	44.986	45.7	0.042599					45	17	3	0	0	0	0.79716	1	3250	3250		11.932	1.8285	1	350910	+		7283	21496	5052	5058	8477	8477					0.1235710816788469
ELYPRWHRKRK	11	Unmodified	_ELYPRWHRKRK_					0	0	0			REV__ENSG00000168517|ENST00000589230|HEXIM2	REV__ENSG00000168517|ENST00000589230|HEXIM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.9689331054688	3	523.635542	1567.8848	-0.019853	-1.0396E-05	-1.51	-0.00079069	-1.5298	-0.00080108	523.6347116404438	45.257	0.75198	45.188	44.899	45.651	-0.068634					47	18	3	0	0	0	0.77205	1	3244	3244		17.167	6.5799	1	315990	+		7284	21496	5052	5058	8478	8478					0.1235710816788469
ELYSAAELLI	10	Unmodified	_ELYSAAELLI_					0	0	0			REV__ENSG00000119950|ENST00000332674|MXI1	REV__ENSG00000119950|ENST00000332674|MXI1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8419189453125	2	561.308072	1120.60159	0.1536	8.6219E-05	0.31593	0.00017733	0.46953	0.00026355	561.8095914834499	66.928	0.40453	67.478	67.246	67.651	0.55071					21	13	2	0	0	0	0.37624	1	7358	7358		44.117	3.3386	1	346940	+		7285	18389	5053	5059	8479	8479					0.04611459209104396
ELYSAAELLI	10	Unmodified	_ELYSAAELLI_					0	0	0			REV__ENSG00000119950|ENST00000332674|MXI1	REV__ENSG00000119950|ENST00000332674|MXI1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	561.308072	1120.60159	1.0328	0.0005797	-1.4633	-0.00082138	-0.43057	-0.00024168	561.3066787337149	67.045	0.47227	67.43	67.161	67.633	0.38515	-0.024178	-0.00060653	NaN	44.117	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161610	+		7286	18389	5053	5059							0.04611459209104396
EMAPRDLKAY	10	Unmodified	_EMAPRDLKAY_					0	0	0		nc|ENSG00000141977|Q96Q77-2|CIB3;ENSG00000141977|ENST00000269878|CIB3	nc|ENSG00000141977|Q96Q77-2|CIB3	nc|ENSG00000141977|Q96Q77-2|CIB3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.7532958984375	2	597.302798	1192.59104	-0.37575	-0.00022443	1.4491	0.00086554	1.0733	0.00064111	597.8052098697635	73.835	0.67577	74.222	73.903	74.579	0.38779					24	17	2	0	0	0	0.37624	1	8310	8310		49.536	0	1	311910			7287	4537	5054	5060	8480	8480					0.00245153283003674
EMCGAILGDI	10	Unmodified	_EMCGAILGDI_					0	0	0		ENSG00000196724|ENST00000396147|ZNF418	ENSG00000196724|ENST00000396147|ZNF418	ENSG00000196724|ENST00000396147|ZNF418	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.2384033203125	2	511.238278	1020.462	0.048272	2.4679E-05	1.1389	0.00058224	1.1871	0.00060691	511.2387137603172	51.185	0.92873	51.183	50.685	51.614	-0.0020447					42	27	2	0	0	0	0.86589	1	4350	4350		29.15	0.89528	1	108680			7288	8096	5055	5061	8481	8481					-0.047409446714254955
EMCRKGVL	8	Unmodified	_EMCRKGVL_					0	0	0			REV__ENSG00000189433|ENST00000339480|GJB4	REV__ENSG00000189433|ENST00000339480|GJB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2454528808594	2	468.243698	934.472843	0.29202	0.00013673	3.1538	0.0014767	3.4458	0.0016135	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.79972	1	3527	3527		62.978	2.6845	1	7645500	+		7289	23084	5056	5062	8482	8482					0.0029850249352421088
EMDELKEKM	9	2 Oxidation (M)	_EM(Oxidation (M))DELKEKM(Oxidation (M))_		EM(1)DELKEKM(1)		EM(120)DELKEKM(120)	0	0	2			REV__nc|ENSG00000073605|Q8TAX9-5|GSDMB	REV__nc|ENSG00000073605|Q8TAX9-5|GSDMB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	592.76025390625	2	592.762314	1183.51008	0.73363	0.00043487	-3.0514	-0.0018088	-2.3178	-0.0013739	592.760289673216	50.04	0.81931	50.885	50.517	51.336	0.84501					54	19	4	0	0	0	0.034797	1	4917	4917		115.49	6.0157	1	1750800	+		7290	16675	5057	5063	8483	8483		238;239			-0.07433915542014802
EMECLECE	8	Unmodified	_EMECLECE_					0	0	0		ENSG00000171811|ENST00000368586|CFAP46	ENSG00000171811|ENST00000368586|CFAP46	ENSG00000171811|ENST00000368586|CFAP46	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.7891540527344	2	493.169204	984.323855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.731	1	74.858	74.358	75.358	0.12711								0	0	0	0.29498	1	6920	6920		26.796	2.5934	1				7291	6713	5058	5064	8484	8484					-0.16893435982217397
EMEKRGLEAI	10	Unmodified	_EMEKRGLEAI_					0	0	0			REV__ENSG00000198707|ENST00000552810|CEP290	REV__ENSG00000198707|ENST00000552810|CEP290	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	588.3080444335938	2	588.308081	1174.60161	-0.83294	-0.00049002	1.8104	0.0010651	0.97749	0.00057506	588.3091179951483	38.229	0.7048	38.571	38.192	38.896	0.34187					29	17	2	0	0	0	0.5766	1	3135	3135		51.335	3.4199	1	789450	+		7292	23359	5059	5065	8485	8485					0.021291359374572494
EMFDEVTIF	9	Unmodified	_EMFDEVTIF_					0	0	0			REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.7560424804688	2	565.757358	1129.50016	3.4176	0.0019336	-3.4391	-0.0019457	-0.021441	-1.213E-05	565.7553328782172	102.09	0.72253	102.39	102.17	102.9	0.29865					31	16	2	0	0	0	0.28875	1	12426	12426		65.803	4.8312	1	918020	+		7293	22914	5060	5066	8486	8486					-0.05940735485114601
EMKILPIRA	9	Unmodified	_EMKILPIRA_					0	0	0		ENSG00000254656|ENST00000649591|RTL1	ENSG00000254656|ENST00000649591|RTL1	ENSG00000254656|ENST00000649591|RTL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	535.8217163085938	2	535.823169	1069.63179	0.38941	0.00020866	-1.9333	-0.0010359	-1.5439	-0.00082725	535.8218981017096	51.04	1.2469	51.089	50.465	51.711	0.0499					73	38	3	0	0	0	0.7932	1	4039	4039		20.947	0.4651	1	279380			7294	8878	5061	5067	8487	8487					0.09975539393303734
EMKKPPVKL	9	Unmodified	_EMKKPPVKL_					0	0	0			REV__ENSG00000031691|ENST00000335783|CENPQ	REV__ENSG00000031691|ENST00000335783|CENPQ	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.325927734375	2	535.325545	1068.63654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.49	1	110.61	110.11	111.11	0.11659								0	0	0	0.32159	1	11895	11895		23.042	1.0826	1		+		7295	16276	5062	5068	8488	8488					0.10496423536051225
EMKRKKNDI	9	Unmodified	_EMKRKKNDI_					0	0	0		ENSG00000057608|ENST00000380191|GDI2;nc|ENSG00000057608|P50395-2|GDI2	ENSG00000057608|ENST00000380191|GDI2	ENSG00000057608|ENST00000380191|GDI2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8286743164062	2	581.324065	1160.63358	-1.9386	-0.0011269	-0.14947	-8.6888E-05	-2.088	-0.0012138	581.8265396308848	59.866	0.15952	60.256	60.135	60.294	0.39077					5	3	2	0	0	0	0.20789	1	6312	6312		64.207	9.431	1	244840			7296	1038	5063	5069	8489	8489					0.05968548411260599
EMLARMKVT	9	Unmodified	_EMLARMKVT_					0	0	0		ENSG00000134962|ENST00000257408|KLB	ENSG00000134962|ENST00000257408|KLB	ENSG00000134962|ENST00000257408|KLB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.7824096679688	2	539.791012	1077.56747	-0.26391	-0.00014246	-3.1794	-0.0017162	-3.4433	-0.0018587	540.288827993101	58.329	0.28196	58.882	58.64	58.922	0.55323					9	6	2	0	0	0	0.20789	1	6088	6088		45.972	5.1941	1	141110			7297	3974	5064	5070	8490	8490					0.031790162448487536
EMLLVRET	8	Unmodified	_EMLLVRET_					0	0	0			REV__nc|ENSG00000063761|Q86TW2-3|ADCK1	REV__nc|ENSG00000063761|Q86TW2-3|ADCK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2689514160156	2	495.76806	989.521567	-0.078007	-3.8673E-05	-2.9571	-0.001466	-3.0351	-0.0015047	495.7660303701194	64.527	0.61285	65.081	64.685	65.298	0.55386					27	14	3	0	0	0	0.92457	1	6978	6978		47.916	3.7988	1	111780	+		7298	16472	5065	5071	8491	8491					0.02638694334268621
EMLLVTIGR	9	Unmodified	_EMLLVTIGR_					0	0	0			REV__ENST00000562211.1_1_16:89458901-89459006:-|nuORF	REV__ENST00000562211.1_1_16:89458901-89459006:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.8009643554688	2	516.299527	1030.5845	-0.58657	-0.00030285	2.6779	0.0013826	2.0913	0.0010798	516.3016574074306	57.099	1.4441	57.132	56.795	58.239	0.033184					114	45	4	0	0	0	0.64922	1	5164	5164		44.117	0	1	705170	+		7299	28792	5066	5072	8492	8492					0.0704326012232741
EMLQKLEKPTK	11	Unmodified	_EMLQKLEKPTK_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.30645751953125	3	448.923367	1343.74827	-0.064768	-2.9076E-05	0.17715	7.9526E-05	0.11238	5.0451E-05	449.2566800031401	23.175	0.24905	22.756	22.687	22.936	-0.41879					6	5	2	0	0	0	0.17272	1	1021	1021		25.892	9.3619	1	14103	+		7300	15493	5067	5073	8493	8493					0.09014813102521657
EMLSKVIIL	9	Oxidation (M)	_EM(Oxidation (M))LSKVIIL_		EM(1)LSKVIIL		EM(44)LSKVIIL	0	0	1		ENST00000532383.5_1_11:10821544-10823273:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2	ENST00000532383.5_1_11:10821544-10823273:-|nuORF	ENST00000532383.5_1_11:10821544-10823273:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3179931640625	2	531.317386	1060.62022	0.23787	0.00012639	2.413	0.0012821	2.6509	0.0014084	531.3183123814076	94.878	1.4608	95.298	94.89	96.35	0.41963					101	35	4	0	0	0	0.64922	1	11404	11404		44.117	13.613	1	2093500			7301	2521	5068	5074	8494	8494		52			0.09233297579316968
EMPTSVGRL	9	Unmodified	_EMPTSVGRL_					0	0	0		ENST00000459881.1_1_3:170784284-170789158:-|nuORF;ENST00000484051.5_1_3:170784284-170800202:-|nuORF	ENST00000459881.1_1_3:170784284-170789158:-|nuORF	ENST00000459881.1_1_3:170784284-170789158:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2587585449219	2	495.257859	988.501166	-1.7096	-0.00084669	4.0161	0.001989	2.3065	0.0011423	495.25992726495855	40.741	2.1466	41.33	40.797	42.943	0.58915					138	58	4	0	0	0	0.6204	1	3548	3548		45.972	0.020292	1	7011700			7302	11996	5069	5075	8495	8495					0.006455236744614012
EMRIVHVPVK	10	Unmodified	_EMRIVHVPVK_					0	0	0			REV__ENSG00000141429|ENST00000269195|GALNT1	REV__ENSG00000141429|ENST00000269195|GALNT1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.2592163085938	2	604.352625	1206.6907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.3	1	111.34	110.84	111.84	0.041832								0	0	0	0.45132	1	13469	13469		20.947	6.0821	1		+		7303	19682	5070	5076	8496	8496					0.09562015687606618
EMRWWHEWRRH	11	Unmodified	_EMRWWHEWRRH_					0	0	0			REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.6067504882812	3	570.272387	1707.79533	0.31998	0.00018247	1.949	0.0011115	2.269	0.001294	570.607804376785	39.654	0.51121	39.742	39.458	39.969	0.088375					14	12	2	0	0	0	0.90244	1	2472	2472		2.534	1.1153	1	66799	+		7304	26194	5071	5077	8497	8497					-0.030254697830969235
EMRWWHEWRRH	11	Unmodified	_EMRWWHEWRRH_					0	0	0			REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	570.272387	1707.79533	-1.2764	-0.0007279	3.5515	0.0020253	2.2751	0.0012974	570.2742915601823	39.35	0.44244	39.35	39.228	39.67	0	-0.32628	0.0013853	NaN	2.534	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62241	+		7305	26194	5071	5077							-0.030254697830969235
EMRWWHEWRRH	11	Unmodified	_EMRWWHEWRRH_					0	0	0			REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	570.272387	1707.79533	-1.1935	-0.00068064	3.0185	0.0017214	1.8249	0.0010407	570.6086819153153	39.752	0.47229	39.708	39.364	39.837	-0.043694	0.031496	0.00047345	NaN	2.534	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47192	+		7306	26194	5071	5077							-0.030254697830969235
EMRWWHEWRRH	11	Unmodified	_EMRWWHEWRRH_					0	0	0			REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	570.272387	1707.79533	-0.69369	-0.00039559	3.1721	0.001809	2.4784	0.0014134	570.2739755321834	39.702	0.47282	39.711	39.385	39.858	0.0092773	0.034599	0.00073628	NaN	2.534	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71488	+		7307	26194	5071	5077							-0.030254697830969235
EMRWWHEWRRH	11	Unmodified	_EMRWWHEWRRH_					0	0	0			REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	570.272387	1707.79533	0.4292	0.00024476	2.2758	0.0012978	2.705	0.0015426	570.6076445105451	39.865	0.47314	39.872	39.598	40.071	0.0065002	0.19478	-0.00079716	NaN	2.534	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97043	+		7308	26194	5071	5077							-0.030254697830969235
EMRWWHEWRRH	11	Unmodified	_EMRWWHEWRRH_					0	0	0			REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	570.272387	1707.79533	0.31998	0.00018247	1.949	0.0011115	2.269	0.001294	570.607804376785	39.654	0.51121	39.742	39.458	39.969	0.088375	0.065406	-0.0013562	NaN	2.534	14	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66799	+		7309	26194	5071	5077							-0.030254697830969235
EMSSDDDSYS	10	Unmodified	_EMSSDDDSYS_					0	0	0			REV__nc|ENSG00000143748|O15381-5|NVL	REV__nc|ENSG00000143748|O15381-5|NVL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.192138671875	2	568.190233	1134.36591	1.1538	0.0006556	2.3017	0.0013078	3.4556	0.0019634	568.191496061514	24.425	1.9431	24.382	23.444	25.387	-0.043221					101	52	3	0	0	0	0.86718	1	951	951		27.882	5.9224	1	65822	+		7310	19836	5072	5078	8498	8498					-0.195894657684903
EMTLWLRRRLR	11	Unmodified	_EMTLWLRRRLR_					0	0	0			REV__ENSG00000124134|ENST00000537075|KCNS1	REV__ENSG00000124134|ENST00000537075|KCNS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.63336181640625	3	510.633033	1528.87727	1.9809	0.0010115	1.3243	0.00067622	3.3052	0.0016878	510.63303476762127	104.3	2.045	104.49	103.76	105.81	0.18887					109	51	3	0	0	0	0.81021	2	12685	12685;12697		9.2118	0	1	329880	+		7311	18560	5073	5079	8499;8500	8499					0.13398632575967895
EMVHGATRIG	10	Oxidation (M)	_EM(Oxidation (M))VHGATRIG_		EM(1)VHGATRIG		EM(44)VHGATRIG	0	0	1		nc|ENSG00000141314|P58872-2|RHBDL3;nc|ENSG00000141314|P58872-3|RHBDL3;ENSG00000141314|ENST00000269051|RHBDL3	nc|ENSG00000141314|P58872-2|RHBDL3	nc|ENSG00000141314|P58872-2|RHBDL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.7691040039062	2	543.771665	1085.52878	0.49378	0.0002685	-3.2312	-0.0017571	-2.7375	-0.0014886	543.7697480604253	22.73	0.42283	22.671	22.443	22.866	-0.05867					22	14	2	0	0	0	0.70553	1	755	755		44.377	7.9304	1	55310			7312	4490	5074	5080	8501	8501		79			-0.010565730653297578
EMWDVFCY	8	Unmodified	_EMWDVFCY_					0	0	0		ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.280517578125	2	546.711896	1091.40924	-0.36473	-0.0001994	-3.9248	-0.0021457	-4.2896	-0.0023452	546.7100774004447	53.76	0.37471	54.174	53.951	54.326	0.4139					14	8	2	0	0	0	0.4196	1	5442	5442		44.531	0.15388	1	85865			7313	4081	5075	5081	8502	8502					-0.1328090273423186
ENAFYEHAQ	9	Unmodified	_ENAFYEHAQ_					0	0	0		ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;nc|ENSG00000168538|Q7Z392-3|TRAPPC11	ENSG00000168538|ENST00000334690|TRAPPC11	ENSG00000168538|ENST00000334690|TRAPPC11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.7367553710938	2	554.738345	1107.46214	0.74421	0.00041284	-4.3899	-0.0024352	-3.6457	-0.0020224	554.7358387058679	30.604	0.70763	30.593	30.134	30.842	-0.010656					28	18	2	0	0	0	0.76419	1	1620	1620		35.152	0.97948	1	51260			7314	6409	5076	5082	8503	8503					-0.08729485355570432
ENAFYEHAQ	9	Unmodified	_ENAFYEHAQ_					0	0	0		ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;nc|ENSG00000168538|Q7Z392-3|TRAPPC11	ENSG00000168538|ENST00000334690|TRAPPC11	ENSG00000168538|ENST00000334690|TRAPPC11	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	554.738345	1107.46214	-1.4866	-0.0008247	-0.53499	-0.00029678	-2.0216	-0.0011215	554.7370737933893	30.696	0.22341	30.696	30.497	30.72	0	0.070838	0.0036823	NaN	35.152	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41881			7315	6409	5076	5082							-0.08729485355570432
ENAKPWPL	8	Unmodified	_ENAKPWPL_					0	0	0		nc|ENSG00000112038|P35372-9|OPRM1	nc|ENSG00000112038|P35372-9|OPRM1	nc|ENSG00000112038|P35372-9|OPRM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7776794433594	2	477.75581	953.497067	-0.81071	-0.00038732	-3.1916	-0.0015248	-4.0023	-0.0019121	477.75428840828584	30.709	0.65521	30.713	30.272	30.928	0.0037193					19	14	2	0	0	0	0.4196	1	1985	1985		10.866	0	1	52877			7316	14849	5077	5083	8504	8504					0.018458022430536403
ENAVEKVNI	9	Unmodified	_ENAVEKVNI_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32868842-32878296:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.16796875	2	508.274564	1014.53457	0.19764	0.00010046	3.3912	0.0017237	3.5889	0.0018241	508.2760163144543	53.459	0.7439	53.873	53.416	54.16	0.4139					25	17	2	0	0	0	0.20789	1	5418	5418		29.17	5.6474	1	271310			7317	1943	5078	5084	8505	8505					0.027888487180121047
ENAVPFSLD	9	Unmodified	_ENAVPFSLD_					0	0	0		ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.2380065917969	2	496.24019	990.465826	0.25594	0.00012701	-4.174	-0.0020713	-3.9181	-0.0019443	496.2378970327027	30.637	0.71332	30.662	30.337	31.05	0.025013					40	21	3	0	0	0	0.78983	1	1615	1615		27.882	1.0861	1	168640			7318	7435	5079	5085	8506	8506					-0.029788155817072948
ENAWEVQPSV	10	Unmodified	_ENAWEVQPSV_					0	0	0		ENST00000393132.2_1_7:134346203-134346287:+|nuORF	ENST00000393132.2_1_7:134346203-134346287:+|nuORF	ENST00000393132.2_1_7:134346203-134346287:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.3016967773438	2	579.774928	1157.5353	-0.071897	-4.1684E-05	1.2042	0.00069814	1.1323	0.00065646	579.7754557415512	49.692	0.41087	50.537	50.272	50.683	0.84501					13	9	2	0	0	0	0.37624	1	4855	4855		66.962	29.803	1	158780			7319	11040	5080	5086	8507	8507					-0.037163566329581954
ENAYQNVEV	9	Unmodified	_ENAYQNVEV_					0	0	0			REV__nc|ENSG00000163554|P02549-2|SPTA1	REV__nc|ENSG00000163554|P02549-2|SPTA1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.191162109375	2	533.246003	1064.47745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.985	1	21.542	21.042	22.042	-0.44324								0	0	0	0.301	1	847	847		30.318	1.1682	1		+		7320	20933	5081	5087	8508	8508					-0.05220618558360002
ENDEDLIGK	9	Unmodified	_ENDEDLIGK_					0	0	0			REV__ENSG00000110756|ENST00000349215|HPS5	REV__ENSG00000110756|ENST00000349215|HPS5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7470703125	2	516.745836	1031.47712	-0.62916	-0.00032512	4.136	0.0021373	3.5069	0.0018122	516.7478941673756	65.22	0.5148	65.247	64.92	65.435	0.027138					56	22	3	0	0	0	0.64555	1	6173	6173		44.377	5.571	1	442420	+		7321	17830	5082	5088	8509	8509					-0.03736038278225351
ENDEEEEED	9	Unmodified	_ENDEEEEED_					0	0	0		ENSG00000185052|ENST00000328041|SLC24A3	REV__ENSG00000205609|ENST00000380876|EIF3CL;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;ENSG00000185052|ENST00000328041|SLC24A3	REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.1893310546875	2	569.188745	1136.36294	0.071585	4.0745E-05	1.2187	0.00069365	1.2903	0.0007344	569.1893340514938	34.219	0.80494	34.222	33.918	34.723	0.0026054					45	17	4	0	0	0	0.7932	1	2088	2088		20.947	0	1	240690			7322	20098;23567;7675	5083	5089	8510	8510					-0.199790176216311
ENDWDKSV	8	Unmodified	_ENDWDKSV_					0	0	0			REV__nc|ENSG00000092203|O94842-3|TOX4	REV__nc|ENSG00000092203|O94842-3|TOX4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.2377014160156	2	496.719621	991.42469	-0.19746	-9.8083E-05	3.3631	0.0016705	3.1656	0.0015724	496.72104012295637	30.843	0.51081	30.796	30.62	31.131	-0.047064					20	13	2	0	0	0	0.4196	1	1737	1737		14.865	0	1	36866	+		7323	17032	5084	5090	8511	8511					-0.07136576621178392
ENEEKFLNL	9	Unmodified	_ENEEKFLNL_					0	0	0		nc|ENSG00000186714|Q6ZRK6-2|CCDC73;ENSG00000186714|ENST00000335185|CCDC73	nc|ENSG00000186714|Q6ZRK6-2|CCDC73	nc|ENSG00000186714|Q6ZRK6-2|CCDC73	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.2865600585938	2	568.285128	1134.5557	0.10141	5.7628E-05	-0.077619	-4.411E-05	0.023788	1.3518E-05	568.2852200834831	56.763	0.44301	56.796	56.634	57.077	0.033184					29	13	3	0	0	0	0.6204	1	5156	5156		45.972	1.5951	1	342000			7324	7813	5085	5091	8512	8512					-0.006191859731416116
ENEINRWFREF	11	Unmodified	_ENEINRWFREF_					0	0	0		ENSG00000163092|ENST00000409195|XIRP2;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8428955078125	3	513.916152	1538.72663	1.1587	0.00059545	-3.5929	-0.0018465	-2.4343	-0.001251	513.9145189249901	23.205	0.6153	22.631	22.436	23.052	-0.57415					24	14	2	0	0	0	0.17955	1	1050	1050		12.957	3.3113	1	44207			7325	5765	5086	5092	8513	8513					-0.02118855601861469
ENEMKLPTL	9	Unmodified	_ENEMKLPTL_					0	0	0			REV__nc|ENSG00000118058|Q03164-2|KMT2A	REV__nc|ENSG00000118058|Q03164-2|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	537.7780151367188	2	537.778625	1073.5427	0.070609	3.7972E-05	-1.2675	-0.00068162	-1.1969	-0.00064365	537.7777783354844	43.95	0.88203	43.891	43.6	44.482	-0.058262					36	21	2	0	0	0	0.7932	1	3102	3102		23.523	0	1	173410	+		7326	18291	5087	5093	8514	8514					0.008866596431289508
ENEWKRTC	8	Unmodified	_ENEWKRTC_					0	0	0		nc|ENSG00000156738|P11836-2|MS4A1;ENSG00000156738|ENST00000345732|MS4A1	nc|ENSG00000156738|P11836-2|MS4A1	nc|ENSG00000156738|P11836-2|MS4A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.3112182617188	2	533.242741	1064.47093	0.83622	0.00044591	-0.77165	-0.00041147	0.064569	3.4431E-05	533.7424955228889	33.365	0.16924	33.576	33.44	33.609	0.21168					5	3	2	0	0	0	0.4196	1	2403	2403		27.882	10.517	1	64002			7327	5391	5088	5094	8515	8515					-0.05872834990736919
ENFIRRSYSE	10	Unmodified	_ENFIRRSYSE_					0	0	0		L1M5_dup19360|chr6:26173337-26173691:-|2.7335932568402104|0.3378610768711136|3.02|63.0|13|3|sense	L1M5_dup19360|chr6:26173337-26173691:-|2.7335932568402104|0.3378610768711136|3.02|63.0|13|3|sense	L1M5_dup19360|chr6:26173337-26173691:-|2.7335932568402104|0.3378610768711136|3.02|63.0|13|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7793884277344	3	434.214198	1299.62076	-1.4694	-0.00063804	1.0655	0.00046267	-0.40388	-0.00017537	434.21458876850147	42.321	1.4786	43.018	42.272	43.75	0.69754					58	36	3	0	0	0	0.37624	1	3825	3825		24.232	0	1	516290			7328	14526	5089	5095	8516	8516					-0.017061914472606077
ENFKARPG	8	Unmodified	_ENFKARPG_					0	0	0		nc|ENSG00000086991|Q9NPH5-9|NOX4;nc|ENSG00000086991|Q9NPH5-6|NOX4;nc|ENSG00000086991|Q9NPH5-8|NOX4;ENSG00000086991|ENST00000263317|NOX4;nc|ENSG00000086991|Q9NPH5-2|NOX4	nc|ENSG00000086991|Q9NPH5-9|NOX4	nc|ENSG00000086991|Q9NPH5-9|NOX4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	459.2506408691406	2	459.743234	917.471915	-1.4198	-0.00065273	1.1067	0.00050881	-0.31306	-0.00014393	459.7436576821662	37.095	0.53632	37.107	36.839	37.375	0.011173					26	11	3	0	0	0	0.4196	1	2446	2446		18.324	0	1	39527			7329	1564	5090	5096	8517	8517					0.0098774744047887
ENFRRLGP	8	Unmodified	_ENFRRLGP_					0	0	0		ENST00000367434.4_1_1:193155339-193155666:-|nuORF	ENST00000367434.4_1_1:193155339-193155666:-|nuORF	ENST00000367434.4_1_1:193155339-193155666:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25994873046875	2	494.769783	987.525013	0.07249	3.5866E-05	-3.222	-0.0015941	-3.1495	-0.0015583	494.7679636892903	36.118	0.79056	36.4	35.89	36.681	0.28173					26	19	2	0	0	0	0.4196	1	2751	2751		50.025	7.1603	1	312150			7330	10544	5091	5097	8518	8518					0.030751252231425497
ENGDYPSRF	9	Unmodified	_ENGDYPSRF_					0	0	0			REV__ENSG00000213339|ENST00000250237|QTRT1	REV__ENSG00000213339|ENST00000250237|QTRT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	542.7413940429688	2	542.738345	1083.46214	0.18757	0.0001018	2.8939	0.0015706	3.0814	0.0016724	542.7398105842881	28.773	0.69491	28.804	28.436	29.131	0.030947					49	24	3	0	0	0	0.78528	1	1400	1400		29.17	7.2102	1	71107	+		7331	23613	5092	5098	8519	8519					-0.07625485355583805
ENGGGSPRSSH	11	Unmodified	_ENGGGSPRSSH_					0	0	0		chr9:128190444-128190517|23|17.04|0.68|4.65|-|2|CIZ1,None|1	chr9:128190444-128190517|23|17.04|0.68|4.65|-|2|CIZ1,None|1	chr9:128190444-128190517|23|17.04|0.68|4.65|-|2|CIZ1,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	542.7390747070312	2	542.741951	1083.46935	0.82326	0.00044682	-4.385	-0.0023799	-3.5617	-0.0019331	542.7395156697249	28.844	0.6699	28.825	28.523	29.193	-0.019405					47	21	3	0	0	0	0.62914	1	1403	1403		41.08	5.928	1	85871			7332	524	5093	5099	8520	8520					-0.0690475275512199
ENGHVKLIVIH	11	Unmodified	_ENGHVKLIVIH_					0	0	0		ENST00000584425.1_1_18:71740698-71749311:-|nuORF;ENST00000578399.5_1_18:71740698-71797950:-|nuORF;nc|ENSG00000141665|Q8NCQ5-2|FBXO15;ENSG00000141665|ENST00000419743|FBXO15	ENST00000584425.1_1_18:71740698-71749311:-|nuORF	ENST00000584425.1_1_18:71740698-71749311:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.7744445800781	3	420.247062	1257.71936	-1.8535	-0.00077893	2.1058	0.00088495	0.25228	0.00010602	420.2481192424616	46.092	0.49909	46.108	45.86	46.359	0.015511					18	14	2	0	0	0	0.17586	1	3349	3349		16.53	3.7181	1	79651			7333	4523	5094	5100	8521	8521					0.10080456588434572
ENGIIEII	8	Unmodified	_ENGIIEII_					0	0	0			REV__nc|ENSG00000081014|Q9UPM8-2|AP4E1	REV__nc|ENSG00000081014|Q9UPM8-2|AP4E1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7568054199219	2	450.755475	899.496398	0.64847	0.0002923	-3.528	-0.0015903	-2.8795	-0.001298	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.89494	1	7918	7918		37.159	2.9866	1	162850	+		7334	16814	5095	5101	8522	8522					0.04262962803340997
ENGKIQKL	8	Unmodified	_ENGKIQKL_					0	0	0			REV__ENST00000479830.2_1_5:68339466-68339598:-|nuORF	REV__ENST00000479830.2_1_5:68339466-68339598:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.3013000488281	2	465.274367	928.53418	-1.1116	-0.0005172	-3.7133	-0.0017277	-4.8249	-0.0022449	465.27054359567893	45.991	0.29389	46.007	45.889	46.183	0.015514					11	8	2	0	0	0	0.4196	1	3368	3368		33.516	0	1	31966	+		7335	27405	5096	5102	8523	8523					0.06705473788792915
ENGKIQKL	8	Unmodified	_ENGKIQKL_					0	0	0			REV__ENST00000479830.2_1_5:68339466-68339598:-|nuORF	REV__ENST00000479830.2_1_5:68339466-68339598:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	465.274367	928.53418	-0.87544	-0.00040732	-2.5115	-0.0011685	-3.3869	-0.0015758	465.27045551813364	45.978	0.4251	45.949	45.757	46.182	-0.028782	-0.028862	0.0006143	NaN	33.516	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39144	+		7336	27405	5096	5102							0.06705473788792915
ENGLHRAL	8	Unmodified	_ENGLHRAL_					0	0	0		ENST00000379752.5_1_1:157030233-157030518:-|nuORF	ENST00000379752.5_1_1:157030233-157030518:-|nuORF	ENST00000379752.5_1_1:157030233-157030518:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	455.248046875	2	455.248683	908.482814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.912	1	52.912	52.412	53.412	0								0	0	0	0.29596	1	4366	4366		35.618	3.6634	1				7337	10902	5097	5103	8524	8524					0.02491149814761684
ENGPQNIY	8	Unmodified	_ENGPQNIY_					0	0	0		ENST00000552176.2_17:6916945-6917602:+|nuORF;ENSG00000219200|ENST00000593646|RNASEK;nc|ENSG00000219200|Q6P5S7-2|RNASEK;nc|ENSG00000219200|Q6P5S7|RNASEK	ENST00000552176.2_17:6916945-6917602:+|nuORF	ENST00000552176.2_17:6916945-6917602:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.7155456542969	2	467.716882	933.41921	0.51266	0.00023978	-3.3259	-0.0015556	-2.8132	-0.0013158	467.71522088082065	72.056	0.78386	72.186	71.901	72.685	0.1301					42	25	2	0	0	0	0.84341	1	6638	6638		24.203	2.2429	1	143620			7338	8663	5098	5104	8525	8525					-0.05016255413011095
ENGRKCSNI	9	Unmodified	_ENGRKCSNI_					0	0	0		nc|ENSG00000150093|P05556-2|ITGB1;ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.7500305175781	2	510.74819	1019.48183	-0.80854	-0.00041296	3.3792	0.0017259	2.5707	0.001313	510.74977137691104	58.503	1.0868	58.895	58.44	59.526	0.39209					59	25	3	0	0	0	0.44421	1	6139	6139		54.776	3.4409	1	1092200			7339	5059	5099	5105	8526	8526					-0.027134326164514277
ENGSCSGDCSN	11	Unmodified	_ENGSCSGDCSN_					0	0	0		nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2;nc|ENSG00000180481|Q4G1C9-6|GLIPR1L2;ENSG00000180481|ENST00000550916|GLIPR1L2;nc|ENSG00000180481|Q4G1C9-2|GLIPR1L2;nc|ENSG00000180481|Q4G1C9-4|GLIPR1L2	nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2	nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.6671142578125	2	536.668945	1071.32334	-0.19034	-0.00010215	-3.1894	-0.0017117	-3.3798	-0.0018138	536.6671017164458	75.354	0.66828	75.749	75.489	76.157	0.39507					26	15	2	0	0	0	0.6493	1	8529	8529		38.754	20.429	1	1052000			7340	7331	5100	5106	8527	8527					-0.20947139377699386
ENIDKIAQW	9	Unmodified	_ENIDKIAQW_					0	0	0		nc|ENSG00000131089|O43307-3|ARHGEF9;nc|ENSG00000131089|O43307-2|ARHGEF9;nc|ENSG00000131089|O43307|ARHGEF9;ENSG00000131089|ENST00000671741|ARHGEF9;ENST00000527365.1_1_2:131798892-131801189:+|nuORF;ENST00000490728.5_1_2:131799319-131803759:+|nuORF;nc|ENSG00000136002|Q9NR80-3|ARHGEF4;ENSG00000136002|ENST00000409359|ARHGEF4;nc|ENSG00000136002|Q9NR80-4|ARHGEF4;nc|ENSG00000136002|Q9NR80|ARHGEF4	nc|ENSG00000131089|O43307-3|ARHGEF9;ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	559.2907104492188	2	558.787838	1115.56112	-1.0353	-0.00057854	-0.12638	-7.0619E-05	-1.1617	-0.00064916	558.787974805338	60.075	0.61468	60.075	59.852	60.467	0					44	24	3	0	0	0	0.038282	2	5257	5248;5257		113.41	17.605	1	286010			7341	4078;3714	5101	5107	8528;8529	8529					0.007965376093352461
ENIIPIIIS	9	Unmodified	_ENIIPIIIS_					0	0	0		ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF	ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3104248046875	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.837	1	60.937	60.437	61.437	0.10082								0	0	0	0.28223	1	5282	5282		37.812	3.639	1				7342	5124	5102	5108	8530	8530					0.09632084279917308
ENILFKLSE	9	Unmodified	_ENILFKLSE_					0	0	0		nc|ENSG00000137033|O95760-3|IL33;ENSG00000137033|ENST00000682010|IL33;nc|ENSG00000137033|O95760-4|IL33;nc|ENSG00000137033|O95760-2|IL33	nc|ENSG00000137033|O95760-3|IL33	nc|ENSG00000137033|O95760-3|IL33	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.2625732421875	2	546.800414	1091.58628	-1.4355	-0.00078492	1.99	0.0010881	0.55453	0.00030322	546.8009600784585	62.578	0.47729	62.966	62.665	63.142	0.38779					15	10	2	0	0	0	0.20789	1	6729	6729		20.947	0	1	87932			7343	4167	5103	5109	8531	8531					0.04414592411899321
ENIRCYLPDAY	11	Unmodified	_ENIRCYLPDAY_					0	0	0		ENST00000509089.1_1_4:62453105-62542754:+|nuORF;nc|ENSG00000150471|Q9HAR2-3|ADGRL3;nc|ENSG00000150471|Q9HAR2-2|ADGRL3;nc|ENSG00000150471|Q9HAR2|ADGRL3;nc|ENSG00000150471|Q9HAR2-4|ADGRL3;ENSG00000150471|ENST00000683033|ADGRL3	ENST00000509089.1_1_4:62453105-62542754:+|nuORF	ENST00000509089.1_1_4:62453105-62542754:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.8818664550781	3	452.879939	1355.61799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.816	1	18.742	18.242	19.242	-0.073704								0	0	0	0.56276	1	350	350		29.551	2.801	1				7344	5067	5104	5110	8532	8532					-0.04559782896444631
ENIRKKDN	8	Unmodified	_ENIRKKDN_					0	0	0		ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107	ENSG00000111581|ENST00000229179|NUP107	ENSG00000111581|ENST00000229179|NUP107	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8074951171875	2	508.777805	1015.54106	-0.94117	-0.00047885	3.8582	0.001963	2.917	0.0014841	508.77939893365146	43.483	0.36081	44.257	44.064	44.424	0.77379					11	8	2	0	0	0	0.4196	1	3949	3949		99.375	0	1	252720			7345	2585	5105	5111	8533	8533					0.033907866693766664
ENIRMTDYI	9	Unmodified	_ENIRMTDYI_					0	0	0			REV__nc|ENSG00000127603|O94854|MACF1	REV__nc|ENSG00000127603|O94854|MACF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.7732543945312	2	577.779156	1153.54376	-0.73566	-0.00042505	-1.8063	-0.0010437	-2.542	-0.0014687	577.7781466391876	76.199	0.58765	76.767	76.474	77.062	0.56836					23	13	2	0	0	0	0.51592	1	8681	8681		51.193	8.7966	1	377670	+		7346	29829	5106	5112	8534	8534					-0.02687125987949912
ENIRMTDYI	9	Unmodified	_ENIRMTDYI_					0	0	0			REV__nc|ENSG00000127603|O94854|MACF1	REV__nc|ENSG00000127603|O94854|MACF1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	577.779156	1153.54376	-0.56409	-0.00032592	-2.1716	-0.0012547	-2.7357	-0.0015806	577.7777107594777	76.339	0.53358	76.738	76.491	77.025	0.3997	-0.0146	-8.9697E-05	NaN	51.193	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310770	+		7347	29829	5106	5112							-0.02687125987949912
ENIRMTDYI	9	Unmodified	_ENIRMTDYI_					0	0	0			REV__nc|ENSG00000127603|O94854|MACF1	REV__nc|ENSG00000127603|O94854|MACF1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	577.779156	1153.54376	-0.73566	-0.00042505	-1.8063	-0.0010437	-2.542	-0.0014687	577.7781466391876	76.199	0.58765	76.767	76.474	77.062	0.56836	0.0146	0.00033239	NaN	51.193	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	377670	+		7348	29829	5106	5112							-0.02687125987949912
ENIYFGIPFIL	11	Unmodified	_ENIYFGIPFIL_					0	0	0			REV__ENSG00000185716|ENST00000542527|MOSMO	REV__ENSG00000185716|ENST00000542527|MOSMO	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7877502441406	3	442.576185	1324.70673	-1.1371	-0.00050323	-4.2259	-0.0018703	-5.363	-0.0023735	442.57423932283325	43.075	0.56183	43.039	42.714	43.276	-0.035816					20	12	2	0	0	0	0.17273	1	3324	3324		17.833	0	1	68139	+		7349	22786	5107	5113	8535	8535					0.057360004055226455
ENKADNLV	8	Unmodified	_ENKADNLV_					0	0	0		ENSG00000164171|ENST00000296585|ITGA2	ENSG00000164171|ENST00000296585|ITGA2	ENSG00000164171|ENST00000296585|ITGA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.7478942871094	2	451.732532	901.45051	-0.15315	-6.9184E-05	0.60184	0.00027187	0.44869	0.00020269	451.73267619637693	33.982	0.53933	34.192	33.942	34.482	0.21003					25	12	3	0	0	0	0.4196	1	2494	2494		51.335	8.9393	1	176670			7350	5933	5108	5114	8536	8536					-0.004156823789003283
ENKAEVSFF	9	Unmodified	_ENKAEVSFF_					0	0	0			REV__ENSG00000109927|ENST00000392793|TECTA	REV__ENSG00000109927|ENST00000392793|TECTA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	535.2147827148438	2	535.761289	1069.50803	0.4301	0.00023043	-3.5334	-0.0018931	-3.1033	-0.0016627	535.7590004050354	29.843	0.42563	29.8	29.589	30.015	-0.043095					15	8	2	0	0	0	0.20789	1	1611	1611		26.693	0	1	45361	+		7351	17782	5109	5115	8537	8537					-0.023948401733377978
ENKARVHLV	9	Unmodified	_ENKARVHLV_					0	0	0		ENSG00000107537|ENST00000263038|PHYH;nc|ENSG00000107537|O14832-2|PHYH	ENSG00000107537|ENST00000263038|PHYH	ENSG00000107537|ENST00000263038|PHYH	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.1903076171875	2	533.311815	1064.60908	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.356	1	18.4	17.9	18.9	0.044048								0	0	0	0.32159	1	318	318		23.042	1.0826	1				7352	2349	5110	5116	8538	8538					0.07935656320023554
ENKEIRKLLH	10	Unmodified	_ENKEIRKLLH_					0	0	0			REV__chr5:40011349-40052290|16|23.31|0.06|8.68|+|1|LINC00603,LINC00603|2	REV__chr5:40011349-40052290|16|23.31|0.06|8.68|+|1|LINC00603,LINC00603|2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3807373046875	2	640.377686	1278.74082	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.094	1	33.146	32.646	33.646	0.05246								0	0	0	0.45132	1	1581	1581		24.519	0.99649	1		+		7353	15855	5111	5117	8539	8539					0.11259841617129496
ENKIKRHLALI	11	Unmodified	_ENKIKRHLALI_					0	0	0			REV__ENSG00000004660|ENST00000348335|CAMKK1	REV__ENSG00000004660|ENST00000348335|CAMKK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.635986328125	3	445.613744	1333.8194	-0.62533	-0.00027866	-2.3661	-0.0010544	-2.9915	-0.001333	445.6117704962787	37.985	0.22292	38.299	38.127	38.35	0.31312					8	5	2	0	0	0	0.17567	1	3080	3080		30.139	17.706	1	44595	+		7354	16059	5112	5118	8540	8540					0.16584693922231963
ENKKFSCVHLV	11	Unmodified	_ENKKFSCVHLV_					0	0	0		ENST00000593539.1_1_19:53747022-53747208:-|nuORF	ENST00000593539.1_1_19:53747022-53747208:-|nuORF	ENST00000593539.1_1_19:53747022-53747208:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	3	435.232424	1302.67544	1.3751	0.0005985	0.58172	0.00025318	1.9569	0.00085169	435.2326296198459	33.822	0.28862	34.127	34.035	34.324	0.30495					9	6	2	0	0	0	0.17339	1	2474	2474		14.086	2.1536	1	136370			7355	14308	5113	5119	8541	8541					0.036211040997613964
ENKKKKLKRTR	11	Unmodified	_ENKKKKLKRTR_					0	0	0			REV__ENSG00000163064|ENST00000295206|EN1	REV__ENSG00000163064|ENST00000295206|EN1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.86456298828125	3	476.975565	1427.90486	-0.9011	-0.0004298	0.56997	0.00027186	-0.33112	-0.00015794	476.9757963736742	67.472	0.23222	67.606	67.517	67.75	0.13326					11	8	2	0	0	0	0.17996	1	6025	6025		5.1424	0	1	78371	+		7356	20877	5114	5120	8542	8542					0.2080285910785733
ENKKNWFGP	9	Unmodified	_ENKKNWFGP_					0	0	0		nc|ENSG00000289720|Q96J02|ITCH;ENSG00000078747|ENST00000374864|ITCH	nc|ENSG00000289720|Q96J02|ITCH	nc|ENSG00000289720|Q96J02|ITCH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.29150390625	2	560.282723	1118.55089	2.4423	0.0013684	3.9334	0.0022038	6.3757	0.0035722	560.2843183886154	105.66	0.34003	105.81	105.56	105.9	0.15584					11	7	2	0	0	0	0.20789	1	12857	12857		20.947	0	1	45270			7357	1406	5115	5121	8543	8543					-0.003640253252342518
ENKLIPGLKII	11	Unmodified	_ENKLIPGLKII_					0	0	0		nc|ENSG00000151726|P33121-2|ACSL1;nc|ENSG00000151726|P33121-3|ACSL1;ENSG00000151726|ENST00000281455|ACSL1	nc|ENSG00000151726|P33121-2|ACSL1	nc|ENSG00000151726|P33121-2|ACSL1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2698974609375	3	413.267463	1236.78056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.154	1	41.114	40.614	41.614	-0.04081								0	0	0	0.56276	1	3075	3075		20.315	0.28454	1				7358	5140	5116	5122	8544	8544					0.17163968567842858
ENKLRVPLLEI	11	Unmodified	_ENKLRVPLLEI_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9395751953125	3	441.938005	1322.79219	0.34059	0.00015052	3.6789	0.0016258	4.0195	0.0017764	441.939508619888	56.282	0.57769	56.381	55.87	56.448	0.099186					56	26	3	0	0	0	0.71803	1	4735	4735		28.577	0.93281	1	966620			7359	2342	5117	5123	8545	8545					0.1437016559118547
ENKQLRKETES	11	Unmodified	_ENKQLRKETES_					0	0	0		ENST00000502495.1_1_4:129805634-129873545:-|nuORF;ENSG00000151466|ENST00000281142|SCLT1	ENST00000502495.1_1_4:129805634-129873545:-|nuORF	ENST00000502495.1_1_4:129805634-129873545:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.5708923339844	3	454.572162	1360.69466	0.30549	0.00013887	-0.41788	-0.00018996	-0.11239	-5.1087E-05	454.57182177352536	29.047	0.39498	29.077	28.848	29.243	0.030945					24	15	2	0	0	0	0.74344	1	1414	1414		23.514	2.6772	1	33629			7360	5119	5118	5124	8546	8546					0.02873731924387357
ENKRQTIQRRL	11	Unmodified	_ENKRQTIQRRL_					0	0	0			REV__ENSG00000165660|ENST00000298492|ABRAXAS2	REV__ENSG00000165660|ENST00000298492|ABRAXAS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.2829284667969	3	481.283057	1440.82734	-0.7743	-0.00037266	1.518	0.0007306	0.74373	0.00035795	481.2837549542837	102.74	2.1503	102.93	102.14	104.29	0.19484					128	53	4	0	0	0	0.76087	1	10826	10826		19.627	5.5409	1	1226400	+		7361	21202	5119	5125	8547	8547					0.1245622117169205
ENKRQYIPV	9	Unmodified	_ENKRQYIPV_					0	0	0		chr20:34588607-34603130|20|14.15|0.79|4.16|-|0|TE_info:L1MC5,L1MC5_dup14439,L1,LINE,donor,-,34603130,34603861|PIGU,None|17	chr20:34588607-34603130|20|14.15|0.79|4.16|-|0|TE_info:L1MC5,L1MC5_dup14439,L1,LINE,donor,-,34603130,34603861|PIGU,None|17	chr20:34588607-34603130|20|14.15|0.79|4.16|-|0|TE_info:L1MC5,L1MC5_dup14439,L1,LINE,donor,-,34603130,34603861|PIGU,None|17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.816650390625	2	573.81693	1145.61931	1.3652	0.00078336	-0.98697	-0.00056634	0.37821	0.00021703	573.816236578435	35.449	1.1004	35.83	35.173	36.274	0.3812					72	28	4	0	0	0	0.31972	1	2716	2716		63.306	1.1989	1	5532000			7362	360	5120	5126	8548	8548					0.052322192545943835
ENKRSTDD	8	Unmodified	_ENKRSTDD_					0	0	0		nc|ENSG00000108018|Q8WY21-4|SORCS1;ENSG00000108018|ENST00000263054|SORCS1;nc|ENSG00000108018|Q8WY21-3|SORCS1;nc|ENSG00000108018|Q8WY21-2|SORCS1;ENST00000478809.2_1_10:108360440-108378027:-|nuORF	nc|ENSG00000108018|Q8WY21-4|SORCS1	nc|ENSG00000108018|Q8WY21-4|SORCS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.8105773925781	2	482.720153	963.425752	-0.73813	-0.00035631	2.6152	0.0012624	1.8771	0.00090609	482.7212020779982	30.429	0.61999	30.458	30.23	30.85	0.028618					22	13	2	0	0	0	0.4196	1	1983	1983		12.207	0	1	117350			7363	2387	5121	5127	8549	8549					-0.057423622522833284
ENLASSHIF	9	Unmodified	_ENLASSHIF_					0	0	0			REV__chr19:56824514-56836018|39|11.51|0.17|6.04|-|ENST00000647621|ZIM2,ZIM2	REV__chr19:56824514-56836018|39|11.51|0.17|6.04|-|ENST00000647621|ZIM2,ZIM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8074951171875	2	509.253631	1016.49271	-1.1684	-0.00059499	-0.95744	-0.00048758	-2.1258	-0.0010826	509.2530182556899	43.128	0.75933	43.902	43.624	44.384	0.77379					40	18	3	0	0	0	0.20789	1	3949	3949		79.451	17.344	1	2905300	+		7364	15723	5122	5128	8550	8550					-0.014877069705107715
ENLDHLPDD	9	Unmodified	_ENLDHLPDD_					0	0	0		nc|ENSG00000036672|O75604-2|USP2;nc|ENSG00000036672|O75604-3|USP2;nc|ENSG00000036672|O75604-4|USP2;ENSG00000036672|ENST00000260187|USP2;ENST00000532613.1_1_11:119229420-119234603:-|nuORF	nc|ENSG00000036672|O75604-2|USP2	nc|ENSG00000036672|O75604-2|USP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	534.2354125976562	2	534.235635	1066.45672	0.65421	0.0003495	-0.7031	-0.00037562	-0.048889	-2.6118E-05	534.2350805422187	27.362	0.50338	27.39	27.143	27.647	0.028172					52	24	3	0	0	0	0.6204	1	1085	1085		45.972	3.5761	1	123070			7365	905	5123	5129	8551	8551					-0.07385208938057986
ENLFRKWMKT	10	Unmodified	_ENLFRKWMKT_					0	0	0		ENSG00000214929|ENST00000344803|SPATA31D1	ENSG00000214929|ENST00000344803|SPATA31D1	ENSG00000214929|ENST00000344803|SPATA31D1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.23919677734375	3	451.576302	1351.70708	-0.39901	-0.00018018	4.1614	0.0018792	3.7623	0.001699	451.57800982971474	25.271	0.26624	24.943	24.838	25.104	-0.32825					7	5	2	0	0	0	0.37624	1	1296	1296		12.957	5.9383	1	17112			7366	8641	5124	5130	8552	8552					0.04529096853707415
ENLHIMQSF	9	Unmodified	_ENLHIMQSF_					0	0	0			REV__ENSG00000169018|ENST00000306917|FEM1B	REV__ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.7693481445312	2	559.768591	1117.52263	0.5211	0.00029169	-1.5048	-0.00084231	-0.98366	-0.00055062	560.2694113681365	49.108	0.72747	50.013	49.686	50.413	0.90424					30	17	2	0	0	0	0.36616	1	4767	4767		60.118	8.9256	1	684970	+		7367	21540	5125	5131	8553	8553					-0.031430912968289704
ENLILSPLL	9	Unmodified	_ENLILSPLL_					0	0	0		ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2;ENSG00000108883|ENST00000426333|EFTUD2	ENST00000590367.5_1_17:42931463-42950195:-|nuORF	ENST00000590367.5_1_17:42931463-42950195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3080139160156	2	506.307875	1010.6012	0.36813	0.00018639	1.8165	0.00091972	2.1847	0.0011061	506.3087401275949	51.82	1.4912	51.879	51.289	52.78	0.059719					73	45	2	0	0	0	0.64922	1	4098	4098		44.117	1.7207	1	160650			7368	2438	5126	5132	8554	8554					0.09632084279917308
ENLILSPLL	9	Unmodified	_ENLILSPLL_					0	0	0		ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2;ENSG00000108883|ENST00000426333|EFTUD2	ENST00000590367.5_1_17:42931463-42950195:-|nuORF	ENST00000590367.5_1_17:42931463-42950195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.30950927734375	2	506.307875	1010.6012	-0.11528	-5.8369E-05	2.3887	0.0012094	2.2734	0.001151	506.30895339856204	46.446	1.9227	46.367	45.268	47.19	-0.079002					66	54	2	0	0	0	0.76764	1	3399	3399		34.173	2.6427	1	167080			7369	2438	5126	5132	8555	8555					0.09632084279917308
ENLISACLQ	9	Unmodified	_ENLISACLQ_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7537536621094	2	495.749867	989.485181	1.1342	0.0005623	2.4383	0.0012088	3.5725	0.0017711	495.75303545632914	27.534	0.90796	27.28	26.989	27.897	-0.25465					56	20	4	0	0	0	0.17881	1	1609	1609		78.264	3.2205	1	451180	+		7370	20278	5127	5133	8556	8556					-0.009981825624549856
ENLKNLVHQKT	11	Unmodified	_ENLKNLVHQKT_					0	0	0		L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|23|1|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|23|1|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|23|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.78692626953125	3	441.917493	1322.73065	-1.3253	-0.00058569	3.202	0.001415	1.8766	0.00082932	442.25273206988214	40.807	0.21151	41.396	41.312	41.524	0.58915					6	5	2	0	0	0	0.17272	1	3542	3542		38.714	12.822	1	140680			7371	14576	5128	5134	8557	8557					0.08219233891873046
ENLKRKTK	8	Unmodified	_ENLKRKTK_					0	0	0			REV__ENST00000473749.1_1_2:160599711-160604424:+|nuORF	REV__ENST00000473749.1_1_2:160599711-160604424:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8074951171875	2	508.81419	1015.61383	-0.9437	-0.00048017	1.3512	0.00068751	0.4075	0.00020734	508.814896871399	43.452	2.9729	44.226	43.866	46.839	0.77379					192	73	5	0	0	0	0.35525	1	3949	3949		101.6	5.7855	1	100420000	+		7372	27285	5129	5135	8558	8558					0.10664540462801142
ENLKSLVLH	9	Unmodified	_ENLKSLVLH_					0	0	0		ENSG00000162231|ENST00000294172|NXF1	ENSG00000162231|ENST00000294172|NXF1	ENSG00000162231|ENST00000294172|NXF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	527.3060913085938	2	526.808574	1051.60259	0.82293	0.00043353	-1.88	-0.00099042	-1.0571	-0.0005569	526.8072154711482	100.04	0.79559	100.19	99.764	100.56	0.15073					47	17	4	0	0	0	0.20789	1	10393	10393		26.693	2.4902	1	1121600			7373	5674	5130	5136	8559	8559					0.07885718368675043
ENLLDLPCLQF	11	Unmodified	_ENLLDLPCLQF_					0	0	0		ENST00000584580.1_1_17:45912634-45914483:+|nuORF;ENSG00000141294|ENST00000269025|LRRC46	ENST00000584580.1_1_17:45912634-45914483:+|nuORF	ENST00000584580.1_1_17:45912634-45914483:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796936035156	3	435.556684	1303.64822	-1.3408	-0.000584	2.3191	0.0010101	0.97833	0.00042612	435.55758901583107	40.465	0.75814	40.421	40.095	40.853	-0.043697					53	19	4	0	0	0	0.17244	1	2941	2941		19.627	11.22	1	1024600			7374	4487	5131	5137	8560	8560					0.008545757687215882
ENLLVEPW	8	Unmodified	_ENLLVEPW_					0	0	0		nc|ENSG00000074755|O43149-3|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;ENSG00000074755|ENST00000381638|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2431335449219	2	500.260925	998.507297	-0.47187	-0.00023606	-3.3439	-0.0016728	-3.8157	-0.0019089	500.25894189238767	45.61	0.51993	46.505	46.208	46.728	0.89542					16	12	2	0	0	0	0.4196	1	4263	4263		45.952	3.5558	1	415230			7375	1313	5132	5138	8561	8561					0.007983651776157785
ENLNSSCPY	9	Unmodified	_ENLNSSCPY_					0	0	0			REV__ENST00000267339.6_1_13:111531801-111531978:-|nuORF	REV__ENST00000267339.6_1_13:111531801-111531978:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.7108154296875	2	513.713482	1025.41241	-0.36307	-0.00018651	-3.3059	-0.0016983	-3.669	-0.0018848	513.7117372856758	35.228	0.53154	35.171	34.853	35.384	-0.056385					25	12	3	0	0	0	0.76255	1	2254	2254		35.618	0	1	76448	+		7376	24506	5133	5139	8562	8562					-0.0992793635587077
ENLPFGIL	8	Unmodified	_ENLPFGIL_					0	0	0		ENST00000504771.2_1_5:118690639-118690939:+|nuORF	ENST00000504771.2_1_5:118690639-118690939:+|nuORF	ENST00000504771.2_1_5:118690639-118690939:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.76104736328125	2	451.752736	901.490919	-0.22172	-0.00010016	-0.90768	-0.00041005	-1.1294	-0.00051021	451.7505754040004	33.523	0.25248	33.693	33.568	33.821	0.16971					9	5	2	0	0	0	0.4196	1	2435	2435		20.482	0	1	45111			7377	12912	5134	5140	8563	8563					0.03623284011530359
ENLQCLRERG	10	Unmodified	_ENLQCLRERG_					0	0	0		ENSG00000255561|ENST00000260257|FDXACB1	ENSG00000255561|ENST00000260257|FDXACB1	ENSG00000255561|ENST00000260257|FDXACB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7852478027344	3	406.540028	1216.59825	0.69194	0.0002813	-3.6071	-0.0014664	-2.9152	-0.0011851	406.53836070594326	32.676	0.46764	32.887	32.593	33.061	0.21168					16	10	2	0	0	0	0.37624	1	2318	2318		35.178	19.845	1	112340			7378	8887	5135	5141	8564	8564					-0.001381141165666122
ENLRNLEFL	9	Unmodified	_ENLRNLEFL_					0	0	0		nc|ENSG00000173258|Q8TF39-2|ZNF483;ENSG00000173258|ENST00000309235|ZNF483	nc|ENSG00000173258|Q8TF39-2|ZNF483	nc|ENSG00000173258|Q8TF39-2|ZNF483	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2905883789062	2	574.308938	1146.60332	0.047533	2.7298E-05	2.5576	0.0014689	2.6052	0.0014962	574.3103745785446	58.237	0.36815	58.791	58.679	59.047	0.55323					11	8	2	0	0	0	0.20789	1	6115	6115		37.812	16.126	1	213240			7379	6846	5136	5142	8565	8565					0.03588513017712103
ENLRRHIKRNH	11	Unmodified	_ENLRRHIKRNH_					0	0	0		ENST00000377705.5_1_1:6585921-6586796:-|nuORF	ENST00000377705.5_1_1:6585921-6586796:-|nuORF	ENST00000377705.5_1_1:6585921-6586796:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.1878967285156	3	491.61503	1471.82326	-0.80997	-0.00039819	-2.7509	-0.0013524	-3.5609	-0.0017506	491.9479240623668	64.611	0.61531	64.649	64.24	64.856	0.037849					31	20	2	0	0	0	0.17835	1	5694	5694		11.932	0.93417	1	86472			7380	10843	5137	5143	8566	8566					0.1062217646863246
ENLVDQLN	8	Unmodified	_ENLVDQLN_					0	0	0		nc|ENSG00000100815|Q15643-2|TRIP11;ENSG00000100815|ENST00000267622|TRIP11	nc|ENSG00000100815|Q15643-2|TRIP11	nc|ENSG00000100815|Q15643-2|TRIP11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.7720947265625	2	472.737814	943.461075	-0.094271	-4.4565E-05	0.29293	0.00013848	0.19866	9.3916E-05	472.7379305771234	32.227	0.34376	32.353	32.203	32.546	0.12643					13	7	2	0	0	0	0.4196	1	2251	2251		38.806	0	1	113650			7381	1874	5138	5144	8567	8567					-0.012916997244701633
ENLVIAKAR	9	Unmodified	_ENLVIAKAR_					0	0	0		ENSG00000075399|ENST00000389386|VPS9D1;nc|ENSG00000075399|Q9Y2B5-2|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.290283203125	2	507.308741	1012.60293	1.23	0.00062398	-2.0839	-0.0010572	-0.85394	-0.00043321	507.3075979210131	29.817	0.55769	29.727	29.447	30.004	-0.089544					18	12	2	0	0	0	0.20789	1	1936	1936		21.96	0	1	111650			7382	1333	5139	5145	8568	8568					0.0971313808852301
ENLWKVDI	8	Unmodified	_ENLWKVDI_					0	0	0			REV__nc|ENSG00000101444|P23526-2|AHCY	REV__nc|ENSG00000101444|P23526-2|AHCY	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8074951171875	2	508.7742	1015.53385	-0.96712	-0.00049205	-4.109	-0.0020905	-5.0761	-0.0025826	508.77243989925375	43.475	0.43824	44.249	43.946	44.384	0.7738					24	10	3	0	0	0	0.4196	1	3949	3949		102.77	8.7669	1	511620	+		7383	17280	5140	5146	8569	8569					0.02670054068948957
ENLWKVDI	8	Unmodified	_ENLWKVDI_					0	0	0			REV__nc|ENSG00000101444|P23526-2|AHCY	REV__nc|ENSG00000101444|P23526-2|AHCY	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	508.7742	1015.53385	0.30128	0.00015328	-1.3166	-0.00066983	-1.0153	-0.00051654	508.772918541756	44.212	0.11992	44.261	44.176	44.296	0.048996	0.0062339	0.0014733	NaN	102.77	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38376	+		7384	17280	5140	5146							0.02670054068948957
ENMRKATP	8	Oxidation (M)	_ENM(Oxidation (M))RKATP_		ENM(1)RKATP		ENM(48)RKATP	0	0	1		nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;ENSG00000183091|ENST00000397345|NEB	nc|ENSG00000183091|P20929-4|NEB	nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	482.2399597167969	2	481.739834	961.465115	-1.1921	-0.00057428	-2.1252	-0.0010238	-3.3173	-0.0015981	481.7386430281535	30.761	0.48761	30.751	30.514	31.001	-0.010656					20	12	2	0	0	0	0.92394	1	1645	1645		47.657	6.8792	1	52362			7385	7501	5141	5147	8570	8570		130			-0.01715933502396183
ENNFKMFAV	9	Unmodified	_ENNFKMFAV_					0	0	0		nc|ENSG00000112541|Q9Y233-1|PDE10A;nc|ENSG00000112541|Q9Y233-2|PDE10A;ENSG00000112541|ENST00000539869|PDE10A	nc|ENSG00000112541|Q9Y233-1|PDE10A	nc|ENSG00000112541|Q9Y233-1|PDE10A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.8295288085938	2	550.265684	1098.51682	-0.40719	-0.00022406	0.76199	0.0004193	0.3548	0.00019523	550.2662823527121	48.228	0.72507	49.151	48.744	49.469	0.92315					24	17	2	0	0	0	0.20789	1	4687	4687		23.042	0	1	213560			7386	2668	5142	5148	8571	8571					-0.0285018980850964
ENNHRFIL	8	Unmodified	_ENNHRFIL_					0	0	0			REV__ENSG00000135338|ENST00000369846|LCA5	REV__ENSG00000135338|ENST00000369846|LCA5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.6573486328125	2	521.775065	1041.53558	0.39006	0.00020352	-0.14171	-7.394E-05	0.24835	0.00012958	521.7751882278995	52.751	0.49595	53.174	52.93	53.426	0.42348					17	11	2	0	0	0	0.4196	1	5286	5286		29.15	10.887	1	398060	+		7387	19211	5143	5149	8572	8572					0.016471078775794012
ENNLVMNLEFS	11	Unmodified	_ENNLVMNLEFS_					0	0	0		ENSG00000072080|ENST00000168148|SPP2	ENSG00000072080|ENST00000168148|SPP2	ENSG00000072080|ENST00000168148|SPP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2656555175781	3	437.207944	1308.602	0.28455	0.00012441	-0.10582	-4.6264E-05	0.17873	7.8142E-05	437.20841237056976	24.104	0.21788	23.722	23.62	23.837	-0.38178					5	4	2	0	0	0	0.17396	1	1126	1126		32.034	0	1	32851			7388	1268	5144	5150	8573	8573					-0.03995489133376395
ENNPRRRA	8	Unmodified	_ENNPRRRA_					0	0	0		nc|ENSG00000196498|Q9Y618-5|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;ENSG00000196498|ENST00000405201|NCOR2	nc|ENSG00000196498|Q9Y618-5|NCOR2	nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.290283203125	2	506.773388	1011.53222	1.1663	0.00059105	1.2654	0.00064129	2.4317	0.0012323	506.7741003948551	29.868	0.5164	29.778	29.532	30.048	-0.089544					15	10	2	0	0	0	0.4196	1	1936	1936		30.504	0	1	96118			7389	8064	5145	5151	8574	8574					0.026918578235608948
ENNVGGFC	8	Unmodified	_ENNVGGFC_					0	0	0			REV__ENST00000561058.5_1_15:39179122-39310733:-|nuORF	REV__ENST00000561058.5_1_15:39179122-39310733:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.1899108886719	2	420.171253	838.327952	1.7085	0.00071788	2.9985	0.0012599	4.7071	0.0019778	420.17248953739823	92.963	0.75879	93.41	93.235	93.994	0.44662					24	17	2	0	0	0	0.4196	1	11072	11072		44.531	19.081	1	62769	+		7390	28775	5146	5152	8575	8575					-0.09767842381972969
ENPFFQKPV	9	Unmodified	_ENPFFQKPV_					0	0	0		ENSG00000132357|ENST00000254691|CARD6	ENSG00000132357|ENST00000254691|CARD6	ENSG00000132357|ENST00000254691|CARD6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.811767578125	2	553.287474	1104.5604	-1.2583	-0.00069618	-2.2724	-0.0012573	-3.5307	-0.0019535	553.28611989344	59.197	0.65893	59.589	59.234	59.892	0.39209					25	15	2	0	0	0	0.20789	1	6219	6219		71.877	10.906	1	763390			7391	3786	5147	5153	8576	8576					0.012297429602767807
ENPGSIANL	9	Unmodified	_ENPGSIANL_					0	0	0			REV__ENSG00000183431|ENST00000373019|SF3A3	REV__ENSG00000183431|ENST00000373019|SF3A3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.73272705078125	2	457.732532	913.45051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.936	1	29.965	29.465	30.465	0.028618								0	0	0	0.41698	1	1923	1923		56.721	5.3856	1		+		7392	22606	5148	5154	8577	8577					-0.009676823788936417
ENPGSIANL	9	Unmodified	_ENPGSIANL_					0	0	0			REV__ENSG00000183431|ENST00000373019|SF3A3	REV__ENSG00000183431|ENST00000373019|SF3A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.7323303222656	2	457.732532	913.45051	0.12761	5.8411E-05	-0.10638	-4.8693E-05	0.02123	9.7176E-06	457.7324191080723	30.194	0.69272	30.104	29.749	30.442	-0.089544					32	15	3	0	0	0	0.44421	1	1976	1976		54.776	1.4249	1	469770	+		7393	22606	5148	5154	8578	8578					-0.009676823788936417
ENPKQHIPL	9	Unmodified	_ENPKQHIPL_					0	0	0		chr2:9473899-9481286|20|12.9|0.07|7.47|+|2|IAH1,IAH1|2;chr2:9476039-9481286|13|16.69|0.37|5.51|+|2|IAH1,IAH1|1;chr2:9474647-9481286|29|16.86|0.98|4.11|+|2|IAH1,IAH1|1;ENST00000489468.5_1_2:9616148-9627599:+|nuORF;ENST00000495050.5_1_2:9614726-9624712:+|nuORF;ENSG00000134330|ENST00000497473|IAH1	chr2:9473899-9481286|20|12.9|0.07|7.47|+|2|IAH1,IAH1|2	chr2:9473899-9481286|20|12.9|0.07|7.47|+|2|IAH1,IAH1|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.2977905273438	2	538.298373	1074.58219	-0.15282	-8.2265E-05	-0.074032	-3.9851E-05	-0.22686	-0.00012212	538.2981908710656	26.032	0.83897	25.775	25.465	26.304	-0.2572					45	18	3	0	0	0	0.76255	1	1405	1405		35.618	1.4457	1	449360			7394	353	5149	5155	8579	8579					0.047885477088584594
ENPLNKLRVKI	11	Unmodified	_ENPLNKLRVKI_					0	0	0		ENST00000471105.5_1_1:201965436-201974841:+|nuORF;ENSG00000176393|ENST00000295640|RNPEP	ENST00000471105.5_1_1:201965436-201974841:+|nuORF	ENST00000471105.5_1_1:201965436-201974841:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9385070800781	3	441.94175	1322.80342	-1.4729	-0.00065094	-2.9268	-0.0012935	-4.3997	-0.0019444	441.94033054697593	56.641	1.0598	56.713	56.56	57.62	0.071835					108	50	3	0	0	0	0.76087	1	4814	4814		19.627	0.66061	1	756750			7395	7076	5150	5156	8580	8580					0.15492987685320259
ENPQTHEVL	9	Unmodified	_ENPQTHEVL_					0	0	0		ENSG00000144591|ENST00000313597|GMPPA;nc|ENSG00000144591|Q96IJ6-2|GMPPA;ENST00000481170.1_1_2:220366576-220368936:+|nuORF	ENSG00000144591|ENST00000313597|GMPPA	ENSG00000144591|ENST00000313597|GMPPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.7611694335938	2	533.76182	1065.50909	0.80918	0.00043191	-0.92964	-0.00049621	-0.12046	-6.4296E-05	533.761110313377	29.273	0.46471	29.253	29.007	29.472	-0.019405					34	17	3	0	0	0	0.21969	1	1457	1457		71.877	8.3436	1	43301			7396	4720	5151	5157	8581	8581					-0.021046258044179922
ENPQTHEVL	9	Unmodified	_ENPQTHEVL_					0	0	0		ENSG00000144591|ENST00000313597|GMPPA;nc|ENSG00000144591|Q96IJ6-2|GMPPA;ENST00000481170.1_1_2:220366576-220368936:+|nuORF	ENSG00000144591|ENST00000313597|GMPPA	ENSG00000144591|ENST00000313597|GMPPA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	533.76182	1065.50909	0.39709	0.00021195	-0.4609	-0.00024601	-0.063811	-3.406E-05	533.7615808208509	29.157	0.4026	29.188	28.987	29.389	0.030947	-0.016539	0.00014117	NaN	71.877	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35968			7397	4720	5151	5157							-0.021046258044179922
ENPQTHEVL	9	Unmodified	_ENPQTHEVL_					0	0	0		ENSG00000144591|ENST00000313597|GMPPA;nc|ENSG00000144591|Q96IJ6-2|GMPPA;ENST00000481170.1_1_2:220366576-220368936:+|nuORF	ENSG00000144591|ENST00000313597|GMPPA	ENSG00000144591|ENST00000313597|GMPPA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	533.76182	1065.50909	0.37094	0.00019799	-0.30576	-0.0001632	0.065175	3.4788E-05	533.7614245997322	29.216	0.57551	29.173	28.901	29.476	-0.043095	-0.031991	0.00030678	NaN	71.877	32	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59316			7398	4720	5151	5157							-0.021046258044179922
ENQLDPPVMFL	11	Unmodified	_ENQLDPPVMFL_					0	0	0			REV__nc|ENSG00000047648|O43182-4|ARHGAP6	REV__nc|ENSG00000047648|O43182-4|ARHGAP6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7813720703125	3	434.884801	1301.63257	0.83258	0.00036208	-0.32817	-0.00014271	0.50441	0.00021936	435.2196110640738	66.663	1.5136	66.691	66.175	67.689	0.028587					107	68	2	0	0	0	0.17437	1	6290	6290		32.034	14.867	1	262750	+		7399	16358	5152	5158	8582	8582					-0.006177107483154032
ENQLRILLLQN	11	Unmodified	_ENQLRILLLQN_					0	0	0		ENSG00000146858|ENST00000275766|ZC3HAV1L	ENSG00000146858|ENST00000275766|ZC3HAV1L	ENSG00000146858|ENST00000275766|ZC3HAV1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.93231201171875	3	451.933143	1352.7776	-0.13819	-6.2454E-05	-0.95476	-0.00043149	-1.093	-0.00049394	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.72374	1	10805	10805		27.644	2.5179	1	924270			7400	4866	5153	5159	8583	8583					0.11532093443042868
ENQLYFTY	8	Unmodified	_ENQLYFTY_					0	0	0		ENSG00000101337|ENST00000398022|TM9SF4	ENSG00000101337|ENST00000398022|TM9SF4	ENSG00000101337|ENST00000398022|TM9SF4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	539.1389770507812	2	539.248015	1076.48148	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.3	1	63.323	62.823	63.823	0.022984								0	0	0	0.3055	1	5538	5538		44.117	1.6423	1				7401	1932	5154	5160	8584	8584					-0.05370529064657603
ENQYIFDV	8	Unmodified	_ENQYIFDV_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7711181640625	2	514.24019	1026.46583	0.80207	0.00041246	1.7102	0.00087943	2.5122	0.0012919	514.2409915133697	51.581	0.45517	52.248	52.021	52.477	0.6673					20	10	3	0	0	0	0.4196	1	5116	5116		31.955	0	1	514210	+		7402	18606	5155	5161	8585	8585					-0.046348155816986036
ENRHLFMKLI	10	Unmodified	_ENRHLFMKLI_					0	0	0			REV__ENST00000556191.5_3_14:32547479-32559780:+|nuORF	REV__ENST00000556191.5_3_14:32547479-32559780:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801208496094	3	434.244664	1299.71216	0.47264	0.00020524	4.4656	0.0019392	4.9383	0.0021444	434.2465826201134	34.549	0.69704	34.759	34.319	35.016	0.21002					25	16	3	0	0	0	0.37624	1	2539	2539		32.751	0	1	169210	+		7403	25313	5156	5162	8586	8586					0.07429400716341661
ENRIDLVL	8	Unmodified	_ENRIDLVL_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|86|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|86|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.304931640625	2	486.279649	970.544745	0.26423	0.00012849	0.21519	0.00010464	0.47942	0.00023313	486.27933777188383	33.063	0.71828	33.233	32.934	33.653	0.16971					28	16	3	0	0	0	0.4196	1	2399	2399		30.504	0	1	492310	+		7404	29639	5157	5163	8587	8587					0.05829456443234449
ENRIDLVL	8	Unmodified	_ENRIDLVL_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|86|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|86|2|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	486.279649	970.544745	0.18056	8.7804E-05	-2.9981	-0.0014579	-2.8176	-0.0013701	486.27620113219956	33.243	0.094532	33.353	33.31	33.405	0.10991	0.065214	-0.00050519	NaN	30.504	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28497	+		7405	29639	5157	5163							0.05829456443234449
ENRIIDVDA	9	Unmodified	_ENRIIDVDA_					0	0	0		ENST00000324309.8_1_4:24833126-24981729:-|nuORF;nc|ENSG00000181982|Q6ZUS6-2|CCDC149;nc|ENSG00000181982|Q6ZUS6-6|CCDC149;nc|ENSG00000181982|Q6ZUS6|CCDC149;nc|ENSG00000181982|Q6ZUS6-5|CCDC149;nc|ENSG00000181982|Q6ZUS6-4|CCDC149;ENSG00000181982|ENST00000635206|CCDC149	ENST00000324309.8_1_4:24833126-24981729:-|nuORF	ENST00000324309.8_1_4:24833126-24981729:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.8121337890625	2	522.769645	1043.52474	-0.57847	-0.00030241	-2.4061	-0.0012579	-2.9846	-0.0015603	523.2678019446657	30.645	0.17725	30.673	30.538	30.716	0.028618					5	3	2	0	0	0	0.20789	1	2020	2020		44.377	8.7589	1	29767			7406	10057	5158	5164	8588	8588					0.004716607126283634
ENRLIHRLKKR	11	Unmodified	_ENRLIHRLKKR_					0	0	0		ENST00000575042.1_1_16:3493766-3500111:+|nuORF	ENST00000575042.1_1_16:3493766-3500111:+|nuORF	ENST00000575042.1_1_16:3493766-3500111:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.23651123046875	3	488.307426	1461.90045	-0.13507	-6.5957E-05	-2.2064	-0.0010774	-2.3415	-0.0011434	488.30623467212865	63.91	1.5185	63.876	63.288	64.807	-0.034256					73	47	3	0	0	0	0.17289	1	6068	6068		21.78	5.2506	1	100370			7407	14043	5159	5165	8589	8589					0.1879739468495245
ENRLIHRLKKR	11	Unmodified	_ENRLIHRLKKR_					0	0	0		ENST00000575042.1_1_16:3493766-3500111:+|nuORF	ENST00000575042.1_1_16:3493766-3500111:+|nuORF	ENST00000575042.1_1_16:3493766-3500111:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.23614501953125	3	488.307426	1461.90045	-2.6273	-0.0012829	0.055964	2.7328E-05	-2.5713	-0.0012556	488.3074115910348	63.776	1.58	63.803	63.175	64.755	0.027142					75	53	2	0	0	0	0.17504	1	6010	6010		25.068	13.135	1	78679			7408	14043	5159	5165	8590	8590					0.1879739468495245
ENRPECRAY	9	Unmodified	_ENRPECRAY_					0	0	0		ENST00000503588.1_1_4:129207829-129207868:-|nuORF	ENST00000503588.1_1_4:129207829-129207868:-|nuORF	ENST00000503588.1_1_4:129207829-129207868:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.2578125	2	569.258922	1136.50329	0.72216	0.0004111	-1.4479	-0.00082425	-0.72577	-0.00041315	569.2579521294736	71.86	0.57636	72.41	72.154	72.73	0.55008					31	13	3	0	0	0	0.66686	1	8045	8045		42.864	8.6917	1	348290			7409	12886	5160	5166	8591	8591					-0.05950047587748486
ENRQKLRIFYQ	11	Unmodified	_ENRQKLRIFYQ_					0	0	0		ENSG00000178691|ENST00000322652|SUZ12	ENSG00000178691|ENST00000322652|SUZ12	ENSG00000178691|ENST00000322652|SUZ12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8035583496094	3	498.944042	1493.8103	0.023632	1.1791E-05	-0.82277	-0.00041051	-0.79913	-0.00039872	498.9435183204559	51.787	0.67601	51.785	51.395	52.071	-0.0020447					48	15	4	0	0	0	0.17996	1	4441	4441		12.433	0	1	289220			7410	7218	5161	5167	8592	8592					0.08314300565871235
ENRQKLRIFYQ	11	Unmodified	_ENRQKLRIFYQ_					0	0	0		ENSG00000178691|ENST00000322652|SUZ12	ENSG00000178691|ENST00000322652|SUZ12	ENSG00000178691|ENST00000322652|SUZ12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.80340576171875	3	498.944042	1493.8103	-0.60556	-0.00030214	-0.26854	-0.00013399	-0.8741	-0.00043613	498.9436452881972	51.716	1.0015	51.692	51.282	52.283	-0.02343					64	23	4	0	0	0	0.17521	1	4581	4581		28.577	19.365	1	306880			7411	7218	5161	5167	8593	8593					0.08314300565871235
ENRQKLRIFYQ	11	Unmodified	_ENRQKLRIFYQ_					0	0	0		ENSG00000178691|ENST00000322652|SUZ12	ENSG00000178691|ENST00000322652|SUZ12	ENSG00000178691|ENST00000322652|SUZ12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8037109375	3	498.944042	1493.8103	-1.2932	-0.00064522	0.42285	0.00021098	-0.87032	-0.00043424	498.94407436591547	51.774	0.82024	51.786	51.398	52.218	0.012436					56	19	4	0	0	0	0.17567	1	4453	4453		18.966	6.0088	1	370470			7412	7218	5161	5167	8594	8594					0.08314300565871235
ENRVIFDLIYE	11	Unmodified	_ENRVIFDLIYE_					0	0	0		nc|ENSG00000196912|Q8N2N9-3|ANKRD36B;nc|ENSG00000196912|Q8N2N9-2|ANKRD36B;ENSG00000196912|ENST00000359901|ANKRD36B	nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.911865234375	3	470.913637	1409.71908	0.27725	0.00013056	-3.1804	-0.0014977	-2.9031	-0.0013671	470.91181584398765	45.581	0.436	45.624	45.523	45.959	0.042599					15	11	2	0	0	0	0.75457	1	3310	3310		21.032	1.4053	1	125710			7413	8112	5162	5168	8595	8595					0.030609920779170352
ENRYRKKSKRE	11	Unmodified	_ENRYRKKSKRE_					0	0	0			REV__nc|ENSG00000123200|Q5T200-2|ZC3H13	REV__nc|ENSG00000123200|Q5T200-2|ZC3H13	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.80340576171875	3	498.614696	1492.82226	-1.4667	-0.00073133	2.4396	0.0012164	0.97289	0.0004851	498.6160003103624	52.163	0.6972	52.163	51.875	52.572	0					30	18	3	0	0	0	0.17835	1	4271	4271		4.8861	0	1	122240	+		7414	18531	5163	5169	8596	8596					0.09555917309057804
ENSPHQSEY	9	Unmodified	_ENSPHQSEY_					0	0	0			REV__nc|ENSG00000137033|O95760-4|IL33	REV__nc|ENSG00000137033|O95760-4|IL33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.7249755859375	2	545.725435	1089.43632	0.038725	2.1133E-05	0.18263	9.9666E-05	0.22135	0.0001208	545.7253809318471	24.371	0.59245	24.429	24.104	24.696	0.058167					63	27	3	0	0	0	0.67345	1	846	846		42.396	1.8235	1	214050	+		7415	19354	5164	5170	8597	8597					-0.10482379597829095
ENSPHQSEY	9	Unmodified	_ENSPHQSEY_					0	0	0			REV__nc|ENSG00000137033|O95760-4|IL33	REV__nc|ENSG00000137033|O95760-4|IL33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.7257690429688	2	545.725435	1089.43632	0.15567	8.4953E-05	0.026249	1.4325E-05	0.18192	9.9277E-05	545.7252214865288	24.071	0.65352	24.165	23.825	24.479	0.094501					62	30	3	0	0	0	0.76255	1	805	805		35.618	4.0885	1	210980	+		7416	19354	5164	5170	8598	8598					-0.10482379597829095
ENSQGSIL	8	Unmodified	_ENSQGSIL_					0	0	0		ENSG00000166450|ENST00000389286|PRTG	ENSG00000166450|ENST00000389286|PRTG	ENSG00000166450|ENST00000389286|PRTG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.25048828125	2	424.211432	846.408311	1.6795	0.00071248	4.3423	0.001842	6.0218	0.0025545	424.2132432854426	98.573	1.3504	98.95	97.914	99.265	0.37679					57	32	3	0	0	0	0.4196	1	11787	11787		49.442	5.3247	1	459790			7417	6198	5165	5171	8599	8599					-0.021036577872678208
ENSQGSIL	8	Unmodified	_ENSQGSIL_					0	0	0		ENSG00000166450|ENST00000389286|PRTG	ENSG00000166450|ENST00000389286|PRTG	ENSG00000166450|ENST00000389286|PRTG	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	424.211432	846.408311	1.7897	0.00075921	5.0651	0.0021487	6.8548	0.0029079	424.2137741355621	98.476	1.0204	98.838	98.155	99.176	0.36137	-0.055957	0.00038767	NaN	49.442	57	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	465300			7418	6198	5165	5171							-0.021036577872678208
ENTGWMGK	8	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))ENTGWM(Oxidation (M))GK_		ENTGWM(1)GK		ENTGWM(53)GK	1	0	1		nc|ENSG00000121753|O60241-4|ADGRB2;nc|ENSG00000121753|O60241-2|ADGRB2;ENSG00000121753|ENST00000373658|ADGRB2	nc|ENSG00000121753|O60241-4|ADGRB2	nc|ENSG00000121753|O60241-4|ADGRB2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.7141418457031	2	490.710742	979.406931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.083	1	99.446	98.946	99.946	0.36292								0	0	0	0.29	1	11996	11996		53.351	9.2347	1				7419	3196	5166	5172	8600	8600		63			-0.08359615147685417
ENTIRGTIP	9	Unmodified	_ENTIRGTIP_					0	0	0			REV__ENSG00000176029|ENST00000326053|C11orf16;REV__nc|nan|Q9NQ32-2|C11orf16	REV__nc|nan|Q9NQ32-2|C11orf16	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.7735290527344	2	500.774731	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.495	1	50.403	49.903	50.903	-0.091797								0	0	0	0.36353	1	3971	3971		49.442	3.4896	1		+		7420	22100;30331	5167	5173	8601	8601					0.03512268437862076
ENTLLGIYT	9	Unmodified	_ENTLLGIYT_					0	0	0		ENSG00000136546|ENST00000643258|SCN7A	ENSG00000136546|ENST00000643258|SCN7A	ENSG00000136546|ENST00000643258|SCN7A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2483520507812	2	512.27149	1022.52843	-0.57393	-0.00029401	-0.13059	-6.69E-05	-0.70452	-0.00036091	512.2711958213442	46.715	0.21172	46.686	46.509	46.721	-0.028782					5	4	2	0	0	0	0.20789	1	3853	3853		40.778	26.114	1	44111			7421	4120	5168	5174	8602	8602					0.018063304864881502
ENTLRYKV	8	Unmodified	_ENTLRYKV_					0	0	0			REV__ENSG00000186409|ENST00000657597|CCDC30	REV__ENSG00000186409|ENST00000657597|CCDC30	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.2450561523438	2	511.785099	1021.55564	0.67445	0.00034517	3.5572	0.0018205	4.2317	0.0021657	511.78675444241884	63.723	0.63873	64.278	63.879	64.518	0.5545					20	14	2	0	0	0	0.4196	1	6877	6877		14.137	3.8719	1	107640	+		7422	22849	5169	5175	8603	8603					0.045728588175165896
ENTLRYKV	8	Unmodified	_ENTLRYKV_					0	0	0			REV__ENSG00000186409|ENST00000657597|CCDC30	REV__ENSG00000186409|ENST00000657597|CCDC30	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	511.785099	1021.55564	-0.30139	-0.00015425	4.1502	0.002124	3.8488	0.0019697	512.2889117272898	63.604	0.69385	63.991	63.833	64.527	0.38681	-0.14352	0.00011292	NaN	14.137	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97762	+		7423	22849	5169	5175							0.045728588175165896
ENTPRVYVK	9	Unmodified	_ENTPRVYVK_					0	0	0			REV__ENSG00000099617|ENST00000215368|EFNA2	REV__ENSG00000099617|ENST00000215368|EFNA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.259033203125	2	553.303655	1104.59276	-0.21004	-0.00011622	3.0084	0.0016645	2.7983	0.0015483	553.3051634492164	71.152	0.45612	71.7	71.449	71.905	0.54756					12	10	2	0	0	0	0.20789	1	7927	7927		51.193	10.415	1	44082	+		7424	17096	5170	5176	8604	8604					0.04464530363270569
ENTPRVYVK	9	Unmodified	_ENTPRVYVK_					0	0	0			REV__ENSG00000099617|ENST00000215368|EFNA2	REV__ENSG00000099617|ENST00000215368|EFNA2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	553.303655	1104.59276	-0.88985	-0.00049236	6.1376	0.003396	5.2478	0.0029036	553.304783454209	72.084	0.063805	72.084	72.04	72.104	0	0.19191	0.00010558	NaN	51.193	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45101	+		7425	17096	5170	5176							0.04464530363270569
ENTSNNIKV	9	Unmodified	_ENTSNNIKV_					0	0	0			REV__nc|ENSG00000183454|Q12879-2|GRIN2A	REV__nc|ENSG00000183454|Q12879-2|GRIN2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.81475830078125	2	509.76182	1017.50909	-0.74566	-0.00038011	-1.5943	-0.00081273	-2.34	-0.0011928	510.26159679548005	44.046	0.33273	44.832	44.594	44.927	0.78573					9	7	2	0	0	0	0.1939	1	4009	4009		93.195	21.318	1	142430	+		7426	22607	5171	5177	8605	8605					0.0010337419557799876
ENTSYWLQ	8	Unmodified	_ENTSYWLQ_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;ENST00000419533.1_1_1:19477984-19504233:-|nuORF	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.28125	2	520.737814	1039.46108	-1.7652	-0.00091923	-3.3806	-0.0017604	-5.1458	-0.0026796	520.7360308818348	42.604	0.54043	43.301	43.091	43.632	0.69754					33	12	4	0	0	0	0.4196	1	3826	3826		35.618	0	1	532480			7427	3499	5172	5178	8606	8606					-0.057076997244848826
ENVEKRIL	8	Unmodified	_ENVEKRIL_					0	0	0		ENSG00000100926|ENST00000261789|TM9SF1;nc|ENSG00000100926|O15321-2|TM9SF1	ENSG00000100926|ENST00000261789|TM9SF1	ENSG00000100926|ENST00000261789|TM9SF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.79217529296875	2	500.792924	999.571294	-0.6825	-0.00034179	0.4649	0.00023282	-0.2176	-0.00010897	500.7930650260662	32.272	0.64783	32.399	32.073	32.721	0.12643					28	14	3	0	0	0	0.66521	1	2241	2241		68.787	6.6794	1	314220			7428	1885	5173	5179	8607	8607					0.07149145334562945
ENVEKRIL	8	Unmodified	_ENVEKRIL_					0	0	0		ENSG00000100926|ENST00000261789|TM9SF1;nc|ENSG00000100926|O15321-2|TM9SF1	ENSG00000100926|ENST00000261789|TM9SF1	ENSG00000100926|ENST00000261789|TM9SF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7931213378906	2	500.792924	999.571294	0.82867	0.00041499	-1.0359	-0.00051878	-0.20724	-0.00010378	500.79232462466297	32.208	0.73135	32.315	31.93	32.662	0.10707					37	16	4	0	0	0	0.5397	2	2266	2254;2266		73.975	4.5796	1	373020			7429	1885	5173	5179	8608;8609	8609					0.07149145334562945
ENVFISVHL	9	Unmodified	_ENVFISVHL_					0	0	0		ENSG00000164850|ENST00000397088|GPER1	ENSG00000164850|ENST00000397088|GPER1	ENSG00000164850|ENST00000397088|GPER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7910766601562	2	529.287474	1056.5604	-0.49418	-0.00026156	0.90752	0.00048034	0.41335	0.00021878	529.7898021130773	59.98	0.68619	60.534	60.279	60.965	0.55323					28	18	2	0	0	0	0.12652	1	6352	6352		87.754	31.033	1	1617700			7430	6011	5174	5180	8610	8610					0.034377429602727716
ENVFLAPQLA	10	Unmodified	_ENVFLAPQLA_					0	0	0		ENSG00000164080|ENST00000684192|RAD54L2;ENST00000487093.5_1_3:51624427-51671126:+|nuORF	ENSG00000164080|ENST00000684192|RAD54L2	ENSG00000164080|ENST00000684192|RAD54L2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3088989257812	2	551.300581	1100.58661	-1.1595	-0.00063924	-1.4707	-0.00081082	-2.6303	-0.0014501	551.2997679569846	31.56	0.55659	31.64	31.384	31.941	0.079834					28	12	3	0	0	0	0.37624	1	2121	2121		54.776	1.8396	1	335050			7431	5913	5175	5181	8611	8611					0.04034012131751297
ENVGRLITP	9	Unmodified	_ENVGRLITP_					0	0	0		nc|ENSG00000163618|Q9ULU8-2|CADPS;ENSG00000163618|ENST00000383710|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS	nc|ENSG00000163618|Q9ULU8-2|CADPS	nc|ENSG00000163618|Q9ULU8-2|CADPS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.75836181640625	2	499.785099	997.555644	-1.3709	-0.00068516	2.8327	0.0014157	1.4618	0.00073057	499.7862695040836	61.71	0.40203	62.098	62.002	62.404	0.38845					10	8	2	0	0	0	0.20789	1	6587	6587		18.262	0	1	47471			7432	5837	5176	5182	8612	8612					0.056768588175032164
ENVIIILL	8	Unmodified	_ENVIIILL_					0	0	0		ENSG00000221813|ENST00000641698|OR6B1	ENSG00000221813|ENST00000641698|OR6B1	ENSG00000221813|ENST00000641698|OR6B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.3016052246094	2	463.799686	925.584819	-1.1343	-0.00052608	3.785	0.0017555	2.6507	0.0012294	463.8012667988253	46.183	0.63174	46.199	45.791	46.422	0.015514					31	18	2	0	0	0	0.80706	1	3399	3399		19.36	0	1	155340			7433	8666	5177	5183	8613	8613					0.11905003113804469
ENVIPIGKFKI	11	Unmodified	_ENVIPIGKFKI_					0	0	0		ENST00000533735.1_1_6:150322445-150326263:-|nuORF	ENST00000533735.1_1_6:150322445-150326263:-|nuORF	ENST00000533735.1_1_6:150322445-150326263:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	629.3703002929688	2	629.381906	1256.74926	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.994	1	68.053	67.553	68.553	0.059288								0	0	0	0.56276	1	6083	6083		27.047	5.0874	1				7434	13400	5178	5184	8614	8614					0.13115395533782248
ENVKLAEE	8	Unmodified	_ENVKLAEE_					0	0	0		nc|ENSG00000130779|P30622-2|CLIP1;nc|ENSG00000130779|P30622-1|CLIP1;ENSG00000130779|ENST00000620786|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7716979980469	2	466.24019	930.465826	0.067838	3.1629E-05	4.173	0.0019456	4.2408	0.0019773	466.24170126387696	22.509	0.51543	21.898	21.782	22.298	-0.6107					16	11	2	0	0	0	0.4196	1	938	938		82.241	0	1	35621			7435	3684	5179	5185	8615	8615					-0.0021881558171799043
ENVSSILI	8	Unmodified	_ENVSSILI_					0	0	0		ENSG00000117501|ENST00000367759|MROH9	ENSG00000117501|ENST00000367759|MROH9	ENSG00000117501|ENST00000367759|MROH9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26226806640625	2	437.74765	873.480748	0.10299	4.5082E-05	0.24029	0.00010519	0.34328	0.00015027	437.74801358397724	39.465	0.82047	39.435	38.985	39.806	-0.03027					31	19	2	0	0	0	0.4196	1	2751	2751		24.203	6.8378	1	35100			7436	2983	5180	5186	8616	8616					0.03894676286302001
ENVTHEFNLN	10	Unmodified	_ENVTHEFNLN_					0	0	0		ENSG00000213949|ENST00000282588|ITGA1	ENSG00000213949|ENST00000282588|ITGA1	ENSG00000213949|ENST00000282588|ITGA1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852783203125	3	406.191282	1215.55202	0.24369	9.8986E-05	0.38855	0.00015782	0.63224	0.00025681	406.1913646860973	29.141	0.6198	29.172	28.961	29.581	0.030947					49	21	3	0	0	0	0.37624	1	1459	1459		10.104	0	1	139050			7437	8609	5181	5187	8617	8617					-0.04713855746990703
ENVVMDLY	8	Oxidation (M)	_ENVVM(Oxidation (M))DLY_		ENVVM(1)DLY		ENVVM(61)DLY	0	0	1			REV__nc|ENSG00000021461|Q9HB55-6|CYP3A43	REV__nc|ENSG00000021461|Q9HB55-6|CYP3A43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	499.7293701171875	2	499.7286	997.442648	-1.3395	-0.00066936	1.5174	0.00075829	0.17794	8.8924E-05	499.7291395948651	73.087	0.42794	73.129	72.862	73.29	0.042114					37	16	3	0	0	0	0.83456	2	7038	7038;7048		60.972	8.6728	1	256480	+		7438	16240	5182	5188	8618;8619	8618		233			-0.05617577690679809
ENWVHFNWMSD	11	Unmodified	_ENWVHFNWMSD_					0	0	0			REV__nc|ENSG00000166948|O95932-2|TGM6	REV__nc|ENSG00000166948|O95932-2|TGM6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.3124084472656	3	488.871555	1463.59283	-0.80935	-0.00039567	-3.9952	-0.0019531	-4.8045	-0.0023488	489.2038672800579	16.756	0.33776	16.802	16.552	16.889	0.0457					17	14	2	0	0	0	0.181	1	172	172		20.315	7.8822	1	42958	+		7439	21342	5183	5189	8620	8620					-0.12041837699030111
ENWVHFNWMSD	11	Unmodified	_ENWVHFNWMSD_					0	0	0			REV__nc|ENSG00000166948|O95932-2|TGM6	REV__nc|ENSG00000166948|O95932-2|TGM6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	488.871555	1463.59283	0.070573	3.4501E-05	-5.4233	-0.0026513	-5.3528	-0.0026168	489.2030666838217	16.77	0.18174	16.829	16.676	16.857	0.059269	0.013324	-0.0014951	NaN	20.315	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98067	+		7440	21342	5183	5189							-0.12041837699030111
ENYANGSL	8	Unmodified	_ENYANGSL_					0	0	0		ENSG00000204020|ENST00000404459|LIPN	ENSG00000204020|ENST00000404459|LIPN	ENSG00000204020|ENST00000404459|LIPN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.19561767578125	2	434.195782	866.377011	1.8663	0.00081033	-1.3277	-0.00057649	0.53856	0.00023384	434.19507963943687	24.164	0.90636	23.65	23.238	24.144	-0.51365					45	20	3	0	0	0	0.66521	1	1168	1168		68.787	12.066	1	948290			7441	8407	5184	5190	8621	8621					-0.061522308213625365
ENYGNLFSL	9	Unmodified	_ENYGNLFSL_					0	0	0		ENSG00000214652|ENST00000456806|ZNF727	ENSG00000214652|ENST00000456806|ZNF727	ENSG00000214652|ENST00000456806|ZNF727	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.6790161132812	2	528.753464	1055.49238	0.75326	0.00039829	2.1631	0.0011438	2.9164	0.0015421	528.7546503450453	69.107	0.74187	69.491	69.1	69.842	0.38416					29	17	3	0	0	0	0.20789	1	7587	7587		31.53	9.8275	1	311750			7442	8630	5185	5191	8622	8622					-0.03315126690381476
ENYGNLFSL	9	Unmodified	_ENYGNLFSL_					0	0	0		ENSG00000214652|ENST00000456806|ZNF727	ENSG00000214652|ENST00000456806|ZNF727	ENSG00000214652|ENST00000456806|ZNF727	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	528.753464	1055.49238	-0.11309	-5.9798E-05	3.187	0.0016851	3.0739	0.0016253	528.7550100373799	69.101	0.62858	69.648	69.239	69.868	0.54693	0.078535	0.00027543	NaN	31.53	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299530			7443	8630	5185	5191							-0.03315126690381476
ENYLNKDKI	9	Unmodified	_ENYLNKDKI_					0	0	0			REV__ENSG00000070061|ENST00000374647|ELP1	REV__ENSG00000070061|ENST00000374647|ELP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.8021850585938	2	568.800946	1135.58734	-0.98347	-0.0005594	1.0516	0.00059813	0.068086	3.8728E-05	568.8013949163791	58.059	0.65662	58.453	58.081	58.738	0.39407					40	15	4	0	0	0	0.41984	1	6094	6094		56.434	3.4971	1	1541500	+		7444	16595	5186	5192	8623	8623					0.02496806780800398
EPAAPEVP	8	Unmodified	_EPAAPEVP_					0	0	0		ENSG00000205978|ENST00000382554|NYNRIN	ENSG00000205978|ENST00000382554|NYNRIN	ENSG00000205978|ENST00000382554|NYNRIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.20361328125	2	405.205618	808.396684	-0.0495	-2.0058E-05	-2.1856	-0.00088563	-2.2351	-0.00090569	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.84341	1	7777	7777		24.203	2.5004	1	162370			7445	8549	5187	5193	8624	8624					-0.015178548106177914
EPAGFRAAL	9	Unmodified	_EPAGFRAAL_					0	0	0		ENST00000381151.4_2_21:35445925-35467182:+|nuORF;ENST00000477091.5_1_21:35445925-35497723:+|nuORF;ENST00000362077.4_1_21:35445925-35635139:+|nuORF	ENST00000381151.4_2_21:35445925-35467182:+|nuORF	ENST00000381151.4_2_21:35445925-35467182:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2537536621094	2	466.253434	930.492316	0.14963	6.9764E-05	0.4386	0.0002045	0.58823	0.00027426	466.2534991696802	60.959	1.2686	60.926	59.804	61.072	-0.032509					71	38	2	0	0	0	0.74721	1	5709	5709		37.159	2.9866	1	239520			7446	10504	5188	5194	8625	8625					0.024289181002814075
EPAGMKRL	8	Unmodified	_EPAGMKRL_					0	0	0			REV__ENSG00000167996|ENST00000273550|FTH1	REV__ENSG00000167996|ENST00000273550|FTH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2486572265625	2	451.249837	900.485122	-0.10221	-4.6121E-05	-2.4347	-0.0010987	-2.537	-0.0011448	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.86288	1	6463	6463		26.796	1.3459	1	178200	+		7447	21447	5189	5195	8626	8626					0.0308986222820522
EPAHPSSSSE	10	Unmodified	_EPAHPSSSSE_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.2200317382812	2	514.219985	1026.42542	-1.709	-0.0008788	1.7197	0.00088428	0.010673	5.4884E-06	514.2207442821898	29.985	0.6973	29.985	29.672	30.369	0					57	22	3	0	0	0	0.43769	1	1340	1340		60.972	3.1607	1	371510	+		7448	18675	5190	5196	8627	8627					-0.08673781972129291
EPAHPSSSSE	10	Unmodified	_EPAHPSSSSE_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.2199096679688	2	514.219985	1026.42542	0.35237	0.00018119	-0.23899	-0.00012289	0.11338	5.8301E-05	514.2197422056641	29.563	0.92425	29.594	29.101	30.025	0.030945					66	27	3	0	0	0	0.46422	1	1470	1470		58.782	0	1	300180	+		7449	18675	5190	5196	8628	8628					-0.08673781972129291
EPAHPSSSSE	10	Unmodified	_EPAHPSSSSE_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.2188110351562	2	514.219985	1026.42542	-0.70384	-0.00036193	1.3147	0.00067604	0.61085	0.00031411	514.2205697731	30.147	0.52955	30.176	29.876	30.406	0.028618					30	11	3	0	0	0	0.6116	1	1949	1949		49.442	7.0454	1	391320	+		7450	18675	5190	5196	8629	8629					-0.08673781972129291
EPAIIITST	9	Unmodified	_EPAIIITST_					0	0	0		ENST00000498917.2_1_4:68586198-68586285:+|nuORF	ENST00000498917.2_1_4:68586198-68586285:+|nuORF	ENST00000498917.2_1_4:68586198-68586285:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7672424316406	2	472.768583	943.522613	-0.93597	-0.0004425	-2.1112	-0.00099811	-3.0472	-0.0014406	472.7674891607628	81.886	2.6588	82.031	80.209	82.868	0.14512					108	66	2	0	0	0	0.78983	1	7760	7760		27.882	4.8398	1	189560			7451	12831	5191	5197	8630	8630					0.04859231974796785
EPAKLEVK	8	Unmodified	_EPAKLEVK_					0	0	0		ENST00000463719.1_1_3:195298097-195306332:-|nuORF;ENSG00000189058|ENST00000343267|APOD	ENST00000463719.1_1_3:195298097-195306332:-|nuORF	ENST00000463719.1_1_3:195298097-195306332:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.77923583984375	2	457.271293	912.528032	-1.9473	-0.00089046	3.0921	0.0014139	1.1448	0.00052347	457.2723845599325	42.64	0.98441	43.073	42.725	43.71	0.4334					44	23	2	0	0	0	0.4196	1	3869	3869		9.7057	0	1	171390			7452	7985	5192	5198	8631	8631					0.06826955557289693
EPAKLKLI	8	Unmodified	_EPAKLKLI_					0	0	0			REV__ENST00000262198.8_1_18:77897696-77897933:+|nuORF	REV__ENST00000262198.8_1_18:77897696-77897933:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3008728027344	2	456.299853	910.585153	0.18552	8.4654E-05	2.8375	0.0012948	3.0231	0.0013794	456.3010022539405	33.29	1.7406	33.257	32.935	34.675	-0.032681					212	75	4	0	0	0	0.81548	1	1660	1660		20.482	1.1219	1	1700700	+		7453	24411	5193	5199	8632	8632					0.1262842283365444
EPALGLDLL	9	Unmodified	_EPALGLDLL_					0	0	0		nc|ENSG00000063176|Q9NRA0-4|SPHK2;nc|ENSG00000063176|Q9NRA0-2|SPHK2;ENSG00000063176|ENST00000245222|SPHK2;nc|ENSG00000063176|Q9NRA0-5|SPHK2	nc|ENSG00000063176|Q9NRA0-4|SPHK2	nc|ENSG00000063176|Q9NRA0-4|SPHK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2342224121094	2	470.771126	939.527698	-0.59717	-0.00028113	-3.7817	-0.0017803	-4.3789	-0.0020615	470.76920680226823	72.792	0.61089	73.346	73.067	73.678	0.55386					18	14	2	0	0	0	0.20789	1	8223	8223		47.916	1.9636	1	70932			7454	1088	5194	5200	8633	8633					0.05551535837423671
EPALNPAR	8	Unmodified	_EPALNPAR_					0	0	0			REV__ENST00000411511.5_1_22:25678091-25678238:-|nuORF	REV__ENST00000411511.5_1_22:25678091-25678238:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.7716979980469	2	434.237784	866.461016	1.0556	0.0004584	-3.264	-0.0014173	-2.2083	-0.00095894	434.2374623316376	32.533	0.21601	32.745	32.593	32.809	0.21168					6	4	2	0	0	0	0.4196	1	2296	2296		11.511	0	1	26879	+		7455	26367	5195	5201	8634	8634					0.022443450661853603
EPAPLASGP	9	Unmodified	_EPAPLASGP_					0	0	0			REV__ENSG00000181291|ENST00000631683|TMEM132E	REV__ENSG00000181291|ENST00000631683|TMEM132E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7183837890625	2	419.718893	837.423233	-0.30679	-0.00012876	0.071293	2.9923E-05	-0.23549	-9.8841E-05	419.71878265740355	43.537	1.2327	43.487	43.018	44.25	-0.050308					64	29	3	0	0	0	0.74721	1	2985	2985		37.159	0	1	823700	+		7456	22452	5196	5202	8635	8635					-0.0019816591927792615
EPARPDITY	9	Unmodified	_EPARPDITY_					0	0	0		chr7:56101861-56104226|18|117.83|0.67|7.46|-|0|CHCHD2,CHCHD2|1;ENST00000473095.1_1_7:56170554-56174106:-|nuORF;ENSG00000106153|ENST00000395422|CHCHD2	chr7:56101861-56104226|18|117.83|0.67|7.46|-|0|CHCHD2,CHCHD2|1	chr7:56101861-56104226|18|117.83|0.67|7.46|-|0|CHCHD2,CHCHD2|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2666625976562	2	531.266739	1060.51892	-0.19781	-0.00010509	0.24084	0.00012795	0.043023	2.2857E-05	531.2667161695381	45.104	0.77737	45.567	45.264	46.041	0.46313					40	18	3	0	0	0	0.44421	1	4204	4204		54.776	3.4409	1	1576900			7457	503	5197	5203	8636	8636					-0.008914377990549838
EPARVLNV	8	Unmodified	_EPARVLNV_					0	0	0			REV__nc|ENSG00000154719|Q9NYK5-2|MRPL39	REV__nc|ENSG00000154719|Q9NYK5-2|MRPL39	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2611083984375	2	449.261259	896.507966	-0.61479	-0.0002762	-0.29302	-0.00013164	-0.90781	-0.00040784	449.26042265951196	72.866	0.64771	72.825	72.459	73.107	-0.04039					48	22	3	0	0	0	0.90465	1	7133	7133		40.573	8.6178	1	152220	+		7458	29944	5198	5204	8637	8637					0.055572046173210765
EPARVLNV	8	Unmodified	_EPARVLNV_					0	0	0			REV__nc|ENSG00000154719|Q9NYK5-2|MRPL39	REV__nc|ENSG00000154719|Q9NYK5-2|MRPL39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2609558105469	2	449.261259	896.507966	0.4623	0.00020769	-1.961	-0.00088102	-1.4987	-0.00067333	449.2601838602414	68.559	0.73705	68.687	68.425	69.162	0.12838					49	28	2	0	0	0	0.87479	1	6175	6175		30.504	1.3541	1	227220	+		7459	29944	5198	5204	8638	8638					0.055572046173210765
EPASLLQVL	9	Unmodified	_EPASLLQVL_					0	0	0			REV__nc|ENSG00000014914|A4FU01-4|MTMR11	REV__nc|ENSG00000014914|A4FU01-4|MTMR11	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2845458984375	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.376	1	56.936	56.436	57.436	0.55954								0	0	0	0.41698	1	5836	5836		56.721	3.3696	1		+		7460	16207	5199	5205	8639	8639					0.06871224728752168
EPASRYLLVS	10	Unmodified	_EPASRYLLVS_					0	0	0			REV__ENSG00000144589|ENST00000456909|STK11IP	REV__ENSG00000144589|ENST00000456909|STK11IP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3303833007812	2	567.811313	1133.60807	0.49388	0.00028043	-4.129	-0.0023445	-3.6351	-0.002064	567.8088696351375	94.342	1.5603	94.57	94.281	95.841	0.22863					69	37	2	0	0	0	0.37624	1	9618	9618		19.104	6.2918	1	128790	+		7461	19901	5200	5206	8640	8640					0.04661397160452907
EPATVPQP	8	Unmodified	_EPATVPQP_					0	0	0			REV__ENSG00000179057|ENST00000513874|IGSF22	REV__ENSG00000179057|ENST00000513874|IGSF22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.71844482421875	2	419.718893	837.423233	-1.8624	-0.0007817	1.6945	0.0007112	-0.16797	-7.0499E-05	419.71948576487165	43.657	1.1512	43.665	43.227	44.378	0.0082664					62	27	3	0	0	0	0.90523	1	2992	2992		40.778	0.20554	1	963550	+		7462	22313	5201	5207	8641	8641					-0.0019816591927792615
EPAVPQTP	8	Unmodified	_EPAVPQTP_					0	0	0		ENST00000307403.6_1_7:155532339-155538302:+|nuORF;ENSG00000184863|ENST00000401878|RBM33	ENST00000307403.6_1_7:155532339-155538302:+|nuORF	ENST00000307403.6_1_7:155532339-155538302:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.71783447265625	2	419.718893	837.423233	1.6798	0.00070504	-2.4337	-0.0010215	-0.75393	-0.00031644	419.71778611541424	43.542	1.0507	43.54	43.239	44.289	-0.002449					50	25	3	0	0	0	0.9283	2	3346	3346;3358		49.442	3.4896	1	281930			7463	7647	5202	5208	8642;8643	8642					-0.0019816591928929483
EPDCWGLHE	9	Unmodified	_EPDCWGLHE_					0	0	0			REV__ENST00000523488.5_1_8:3008917-3019783:-|nuORF	REV__ENST00000523488.5_1_8:3008917-3019783:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.2235717773438	2	543.221474	1084.42839	0.87077	0.00047302	2.9598	0.0016078	3.8306	0.0020808	543.2230181375598	26.111	0.63519	26.078	25.721	26.356	-0.032125					28	17	2	0	0	0	0.7932	1	1087	1087		18.324	1.607	1	51385	+		7464	25169	5203	5209	8644	8644					-0.11044230118977794
EPDFLLSS	8	Unmodified	_EPDFLLSS_					0	0	0			REV__ENST00000497613.2_1_8:145658938-145666334:-|nuORF	REV__ENST00000497613.2_1_8:145658938-145666334:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.2266845703125	2	454.224008	906.433463	-0.13636	-6.1936E-05	1.528	0.00069404	1.3916	0.0006321	454.22464171732514	79.725	2.7215	79.785	78.721	81.443	0.059349					125	79	2	0	0	0	0.85277	1	7847	7847		25.45	0	1	104480	+		7465	20750	5204	5210	8645	8645					-0.023496029847137834
EPDGRLLEL	9	Unmodified	_EPDGRLLEL_					0	0	0			REV__nc|ENSG00000160293|P52735-3|VAV2	REV__nc|ENSG00000160293|P52735-3|VAV2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.28173828125	2	521.282389	1040.55022	-0.85405	-0.0004452	0.21018	0.00010956	-0.64388	-0.00033564	521.2823263181323	42.715	0.7851	43.148	42.842	43.627	0.4334					44	18	3	0	0	0	0.30689	1	3845	3845		64.207	3.2353	1	1074400	+		7466	20710	5205	5211	8646	8646					0.031571352350511006
EPDREPYCY	9	Unmodified	_EPDREPYCY_					0	0	0			REV__ENSG00000106100|ENST00000222823|NOD1	REV__ENSG00000106100|ENST00000222823|NOD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.238525390625	2	586.239864	1170.46517	-0.99388	-0.00058265	-2.5103	-0.0014716	-3.5041	-0.0020543	586.238310740397	44.944	1.1764	45.788	45.461	46.637	0.84438					57	28	4	0	0	0	0.58668	1	4186	4186		47.657	19.775	1	3002900	+		7467	17597	5206	5212	8647	8647					-0.11323978293080472
EPDTKPVFH	9	Unmodified	_EPDTKPVFH_					0	0	0		nc|ENSG00000275410|P35680-4|HNF1B;nc|ENSG00000275410|P35680-2|HNF1B;ENSG00000275410|ENST00000617811|HNF1B;nc|ENSG00000275410|P35680-3|HNF1B	nc|ENSG00000275410|P35680-4|HNF1B	nc|ENSG00000275410|P35680-4|HNF1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7838745117188	2	535.269281	1068.52401	0.38127	0.00020408	-3.0355	-0.0016248	-2.6542	-0.0014207	535.2672459648132	23.041	0.16323	22.467	22.334	22.497	-0.57415					6	4	2	0	0	0	0.20789	1	981	981		20.947	4.4738	1	28741			7468	9003	5207	5213	8648	8648					-0.007511339364327796
EPEDQFVVP	9	Unmodified	_EPEDQFVVP_					0	0	0		nc|ENSG00000040199|Q6ZVD8-3|PHLPP2;ENSG00000040199|ENST00000568954|PHLPP2	nc|ENSG00000040199|Q6ZVD8-3|PHLPP2	nc|ENSG00000040199|Q6ZVD8-3|PHLPP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.254638671875	2	530.253297	1058.49204	-1.0706	-0.00056768	1.0079	0.00053445	-0.062667	-3.3229E-05	530.2536993167932	67.979	0.99502	67.979	67.627	68.622	0					70	39	2	0	0	0	0.77696	1	6061	6061		31.53	1.0262	1	821190			7469	927	5208	5214	8649	8649					-0.03486546410226765
EPEETVVIAL	10	Unmodified	_EPEETVVIAL_					0	0	0		ENST00000519402.5_1_5:156607865-156667213:+|nuORF;ENSG00000113263|ENST00000422843|ITK	ENST00000519402.5_1_5:156607865-156667213:+|nuORF	ENST00000519402.5_1_5:156607865-156667213:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.6927490234375	2	550.297704	1098.58086	0.34525	0.00018999	-3.9111	-0.0021523	-3.5658	-0.0019623	550.2966232044279	44.614	0.12835	44.663	44.571	44.7	0.048996					4	2	2	0	0	0	0.37624	1	3160	3160		21.96	9.1482	1	27490			7470	2708	5209	5215	8650	8650					0.035508688294157764
EPEETVVIAL	10	Unmodified	_EPEETVVIAL_					0	0	0		ENST00000519402.5_1_5:156607865-156667213:+|nuORF;ENSG00000113263|ENST00000422843|ITK	ENST00000519402.5_1_5:156607865-156667213:+|nuORF	ENST00000519402.5_1_5:156607865-156667213:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	550.297704	1098.58086	-1.5475	-0.00085156	3.3708	0.001855	1.8234	0.0010034	550.8013523767535	43.892	0.16735	44.666	44.582	44.75	0.7738	0.0017169	0.0078184	NaN	21.96	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	235000			7471	2708	5209	5215							0.035508688294157764
EPEIEAEFVF	10	Unmodified	_EPEIEAEFVF_					0	0	0			REV__ENST00000588913.5_1_19:10244345-10246231:-|nuORF	REV__ENST00000588913.5_1_19:10244345-10246231:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.28515625	2	605.287337	1208.56012	0.98247	0.00059468	-2.8631	-0.001733	-1.8806	-0.0011383	605.2852052046003	58.208	1.6782	58.295	57.834	59.512	0.087002					167	73	3	0	0	0	0.76096	1	4982	4982		29.15	0	1	1590000	+		7472	29153	5210	5216	8651	8651					-0.03581721550244765
EPEKPLVRL	9	Unmodified	_EPEKPLVRL_					0	0	0		ENSG00000184227|ENST00000311148|ACOT1;ENSG00000119673|ENST00000238651|ACOT2	ENSG00000184227|ENST00000311148|ACOT1	ENSG00000184227|ENST00000311148|ACOT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.8243408203125	2	540.824224	1079.63389	-0.10264	-5.5508E-05	0.60792	0.00032878	0.50529	0.00027327	540.8243714095667	33.211	1.5239	33.381	32.46	33.984	0.16971					51	35	3	0	0	0	0.71772	1	2373	2373		39.253	0	1	1044900			7473	3084	5211	5217	8652	8652					0.09726291402762399
EPEPVLSY	8	Unmodified	_EPEPVLSY_					0	0	0			REV__nc|ENSG00000129968|Q96GS6-4|ABHD17A	REV__nc|ENSG00000129968|Q96GS6-4|ABHD17A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2291564941406	2	467.231833	932.449113	-0.26264	-0.00012271	2.8974	0.0013537	2.6347	0.001231	467.23346633413524	64.606	2.155	65.159	64.517	66.672	0.55386					169	56	5	0	0	0	0.90465	1	6953	6953		40.573	1.5511	1	8508300	+		7474	18839	5212	5218	8653	8653					-0.019813164676634187
EPEQERPGQE	10	Unmodified	_EPEQERPGQE_					0	0	0			REV__ENSG00000163346|ENST00000368463|PBXIP1	REV__ENSG00000163346|ENST00000368463|PBXIP1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.7865600585938	2	599.770374	1197.52619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.6	1	113.7	113.2	114.2	0.10217								0	0	0	0.45132	1	12184	12184		14.865	0.72775	1		+		7475	20901	5213	5219	8654	8654					-0.0646674998929484
EPERESRP	8	Unmodified	_EPERESRP_					0	0	0		ENSG00000185442|ENST00000327355|FAM174B	ENSG00000185442|ENST00000327355|FAM174B	ENSG00000185442|ENST00000327355|FAM174B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.24346923828125	2	500.246338	998.478122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.043	1	20.114	19.614	20.614	0.071127								0	0	0	0.29568	1	452	452		35.201	6.9464	1				7476	7715	5214	5220	8655	8655					-0.0211777911866875
EPEVFSKSASE	11	Unmodified	_EPEVFSKSASE_					0	0	0		nc|ENSG00000160207|O75031-2|HSF2BP;ENSG00000160207|ENST00000291560|HSF2BP	nc|ENSG00000160207|O75031-2|HSF2BP	nc|ENSG00000160207|O75031-2|HSF2BP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.2858276367188	2	605.285325	1208.5561	-0.21892	-0.00013251	1.1649	0.00070509	0.94597	0.00057258	605.285887959875	58.271	1.5426	58.263	57.785	59.328	-0.0074387					123	65	2	0	0	0	0.38974	1	4971	4971		42.864	11.23	1	1563500			7477	5564	5215	5221	8656	8656					-0.039838110439632146
EPEVSTQPPPE	11	Unmodified	_EPEVSTQPPPE_					0	0	0		nc|ENSG00000138162|O95359-3|TACC2;ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-6|TACC2;nc|ENSG00000138162|O95359-1|TACC2;nc|ENSG00000138162|O95359-5|TACC2	nc|ENSG00000138162|O95359-3|TACC2	nc|ENSG00000138162|O95359-3|TACC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.285888671875	2	605.285325	1208.5561	0.98247	0.00059468	0.45991	0.00027838	1.4424	0.00087305	605.2852052046003	58.208	1.6782	58.295	57.834	59.512	0.087002					167	73	3	0	0	0	0.66858	1	4974	4974		20.837	0	1	1590000			7478	4278	5216	5222	8657	8657					-0.039838110439632146
EPEVSTQPPPE	11	Unmodified	_EPEVSTQPPPE_					0	0	0		nc|ENSG00000138162|O95359-3|TACC2;ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-6|TACC2;nc|ENSG00000138162|O95359-1|TACC2;nc|ENSG00000138162|O95359-5|TACC2	nc|ENSG00000138162|O95359-3|TACC2	nc|ENSG00000138162|O95359-3|TACC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.28564453125	2	605.285325	1208.5561	0.52216	0.00031606	0.80668	0.00048827	1.3288	0.00080433	605.2854781639707	58.165	1.929	58.276	57.865	59.794	0.11027					166	76	4	0	0	0	0.69687	1	4953	4953		22.58	0	1	1588900			7479	4278	5216	5222	8658	8658					-0.039838110439632146
EPFHLIVSY	9	Unmodified	_EPFHLIVSY_					0	0	0		ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-6|FCRLA;nc|ENSG00000132185|Q7L513-13|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;ENSG00000132185|ENST00000236938|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA;nc|ENSG00000132185|Q7L513-10|FCRLA	ENST00000470841.1_1_1:161680536-161681272:+|nuORF	ENST00000470841.1_1_1:161680536-161681272:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.7904052734375	2	552.78985	1103.56515	-1.1045	-0.00061054	0.89473	0.0004946	-0.20975	-0.00011595	552.7899581403892	73.535	1.3702	73.923	73.497	74.867	0.38779					94	35	4	0	0	0	0.034856	3	8268	8268;8277;8326		115.46	21.453	1	12398000			7480	3771	5217	5223	8659;8660;8661	8659					0.01750627103047009
EPFPQSAGKG	10	Unmodified	_EPFPQSAGKG_					0	0	0		ENSG00000176371|ENST00000546148|ZSCAN2;nc|ENSG00000176371|Q7Z7L9-4|ZSCAN2;nc|ENSG00000176371|Q7Z7L9-3|ZSCAN2	ENSG00000176371|ENST00000546148|ZSCAN2	ENSG00000176371|ENST00000546148|ZSCAN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2514953613281	2	509.253631	1016.49271	0.0098394	5.0107E-06	-3.3	-0.0016805	-3.2901	-0.0016755	509.2517561622594	45.726	0.99979	46.621	46.327	47.327	0.89542					60	24	3	0	0	0	0.78666	1	4312	4312		40.058	2.8991	1	2046500			7481	7072	5218	5224	8662	8662					-0.014877069705107715
EPFRLGAAA	9	Unmodified	_EPFRLGAAA_					0	0	0		ENSG00000273238|ENST00000610212|TMEM271	ENSG00000273238|ENST00000610212|TMEM271	ENSG00000273238|ENST00000610212|TMEM271	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.25396728515625	2	466.253434	930.492316	-1.4677	-0.00068433	2.1004	0.00097932	0.63267	0.00029498	466.2543190866504	60.961	1.1333	60.992	59.95	61.083	0.0312					73	35	3	0	0	0	0.78983	1	5675	5675		27.882	1.1893	1	265390			7482	8986	5219	5225	8663	8663					0.024289181002814075
EPFSNVSTIES	11	Unmodified	_EPFSNVSTIES_					0	0	0			REV__nc|ENSG00000188158|Q6T4R5-4|NHS	REV__nc|ENSG00000188158|Q6T4R5-4|NHS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.2860717773438	2	605.285325	1208.5561	-0.21892	-0.00013251	1.1649	0.00070509	0.94597	0.00057258	605.285887959875	58.271	1.5426	58.263	57.785	59.328	-0.0074387					123	65	2	0	0	0	0.67568	1	4991	4991		26.063	0	1	1563500	+		7483	22982	5220	5226	8664	8664					-0.03983811043940477
EPGEPTTYS	9	Unmodified	_EPGEPTTYS_					0	0	0		nc|ENSG00000145113|Q99102-9|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-10|MUC4;ENSG00000145113|ENST00000463781|MUC4	nc|ENSG00000145113|Q99102-9|MUC4	nc|ENSG00000145113|Q99102-9|MUC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.71356201171875	2	490.714005	979.413456	0.46701	0.00022917	-1.6487	-0.00080905	-1.1817	-0.00057988	490.7133417262937	95.947	1.8864	96.351	95.769	97.655	0.40451					153	45	6	0	0	0	0.64922	1	11539	11539		44.117	4.864	1	6523800			7484	4748	5221	5227	8665	8665					-0.07707398715331237
EPGGGSLSL	9	Unmodified	_EPGGGSLSL_					0	0	0			REV__nc|ENSG00000008735|Q13387-3|MAPK8IP2	REV__nc|ENSG00000008735|Q13387-3|MAPK8IP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.7088928222656	2	408.708525	815.402498	0.22749	9.2976E-05	2.0748	0.00084799	2.3023	0.00094096	408.7092199797279	16.847	0.28704	16.236	16.142	16.429	-0.6107					8	6	2	0	0	0	0.78058	1	187	187		30.504	0	1	111680	+		7485	16142	5222	5228	8666	8666					-0.012587562989324397
EPGGPVWVQG	10	Unmodified	_EPGGPVWVQG_					0	0	0		ENST00000497548.5_1_17:19459198-19470111:+|nuORF	ENST00000497548.5_1_17:19459198-19470111:+|nuORF	ENST00000497548.5_1_17:19459198-19470111:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.25146484375	2	513.256174	1024.49779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.152	1	54.207	53.707	54.707	0.055614								0	0	0	0.45132	1	4462	4462		32.812	2.3088	1				7486	12810	5223	5229	8667	8667					-0.013474031079113047
EPGIEMQVE	9	Unmodified	_EPGIEMQVE_					0	0	0		ENSG00000147246|ENST00000276198|HTR2C	ENSG00000147246|ENST00000276198|HTR2C	ENSG00000147246|ENST00000276198|HTR2C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3137817382812	2	516.239332	1030.46411	-0.25991	-0.00013418	-2.5282	-0.0013052	-2.7881	-0.0014393	516.2384698930612	99.046	0.44559	99.269	99.168	99.613	0.22262					19	10	3	0	0	0	0.20789	1	10312	10312		37.812	3.639	1	280320			7487	4891	5224	5230	8668	8668					-0.0499019266196683
EPGIFFSALY	10	Unmodified	_EPGIFFSALY_					0	0	0			REV__ENST00000536163.5_2_7:141359822-141360044:-|nuORF	REV__ENST00000536163.5_2_7:141359822-141360044:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	572.2881469726562	2	572.289682	1142.56481	-1.0194	-0.0005834	-2.8099	-0.0016081	-3.8293	-0.0021915	572.2881114485577	53.875	0.57182	53.87	53.598	54.17	-0.0053711					29	14	3	0	0	0	0.74274	1	4737	4737		42.396	8.2236	1	185200	+		7488	28402	5225	5231	8669	8669					-0.0007679261680095806
EPGKEGGPGAL	11	Unmodified	_EPGKEGGPGAL_					0	0	0			REV__ENST00000257100.7_1_1:32262302-32263832:-|nuORF	REV__ENST00000257100.7_1_1:32262302-32263832:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.25885009765625	2	506.258914	1010.50327	-0.17016	-8.6145E-05	0.22992	0.0001164	0.05976	3.0254E-05	506.2589198975556	19.809	0.87017	19.739	19.472	20.343	-0.069735					72	29	4	0	0	0	0.72739	1	504	504		27.047	4.0048	1	500210	+		7489	24337	5226	5232	8670	8670					-0.0015572431608461557
EPGKKLDIKIK	11	Unmodified	_EPGKKLDIKIK_					0	0	0			REV__nc|ENSG00000116117|Q8TEW8-6|PARD3B	REV__nc|ENSG00000116117|Q8TEW8-6|PARD3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3765869140625	2	634.900463	1267.78637	6.8674	0.0043601	3.3193	0.0021074	10.187	0.0064676	634.9020273141758	111.84	0.1647	111.88	111.78	111.95	0.032707					12	6	3	0	0	0	0.17385	1	13568	13568		13.454	0	1	153410	+		7490	18178	5227	5233	8671	8671					0.16319067079507477
EPGLEPGLG	9	Unmodified	_EPGLEPGLG_					0	0	0		ENST00000491370.1_1_2:220435199-220436548:-|nuORF	ENST00000491370.1_1_2:220435199-220436548:-|nuORF	ENST00000491370.1_1_2:220435199-220436548:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.1534423828125	2	434.724175	867.433798	-1.5927	-0.00069239	-2.6837	-0.0011667	-4.2764	-0.0018591	434.72445433074853	68.109	0.16652	68.244	68.153	68.32	0.13521					7	5	2	0	0	0	0.20789	1	6095	6095		30.504	18.297	1	19356			7491	12683	5228	5234	8672	8672					-0.005221832648430791
EPGLIQLS	8	Unmodified	_EPGLIQLS_					0	0	0			REV__ENST00000372829.7_1_X:100805992-100807819:+|nuORF	REV__ENST00000372829.7_1_X:100805992-100807819:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2616271972656	2	428.742368	855.470183	-1.658	-0.00071084	3.944	0.0016909	2.286	0.0009801	428.7434503083632	90.728	0.1566	90.945	90.826	90.983	0.21736					5	3	2	0	0	0	0.4196	1	9112	9112		23.042	0	1	49149	+		7492	25734	5229	5235	8673	8673					0.03666693631862472
EPGLLLWAPS	10	Unmodified	_EPGLLLWAPS_					0	0	0			REV__ENST00000355530.6_1_17:4389827-4391457:+|nuORF	REV__ENST00000355530.6_1_17:4389827-4391457:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.27685546875	2	541.797675	1081.5808	-0.66205	-0.0003587	-3.7896	-0.0020532	-4.4517	-0.0024119	541.7956520874716	54.542	0.75786	55.127	54.874	55.632	0.58474					39	17	4	0	0	0	0.37624	1	5608	5608		20.947	11.764	1	579360	+		7493	25381	5230	5236	8674	8674					0.04326913620070627
EPGLSFTTTD	10	Unmodified	_EPGLSFTTTD_					0	0	0		ENSG00000101190|ENST00000335351|TCFL5	ENSG00000101190|ENST00000335351|TCFL5	ENSG00000101190|ENST00000335351|TCFL5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	534.7750854492188	2	534.248212	1066.48187	-0.34128	-0.00018233	-0.071281	-3.8082E-05	-0.41256	-0.00022041	534.2480497365547	64.373	0.63911	64.4	63.954	64.593	0.027138					37	17	3	0	0	0	0.37624	1	6071	6071		32.812	3.6629	1	109800			7494	1907	5231	5237	8675	8675					-0.04871154135480538
EPGMGPLLPH	10	Unmodified	_EPGMGPLLPH_					0	0	0			REV__ENST00000566264.1_1_16:1583925-1584099:+|nuORF	REV__ENST00000566264.1_1_16:1583925-1584099:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.3237915039062	2	524.268227	1046.5219	0.24036	0.00012601	1.9339	0.0010139	2.1742	0.0011399	524.2691387166047	30.653	0.69735	30.657	30.404	31.101	0.0037193					26	15	3	0	0	0	0.37624	1	2005	2005		38.806	18.809	1	327630	+		7495	28867	5232	5238	8676	8676					0.000501140541246059
EPGNMKLL	8	Oxidation (M)	_EPGNM(Oxidation (M))KLL_		EPGNM(1)KLL		EPGNM(82)KLL	0	0	1			REV__nc|ENSG00000198431|Q16881-3|TXNRD1	REV__nc|ENSG00000198431|Q16881-3|TXNRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	459.239501953125	2	459.241678	916.468803	0.28287	0.00012991	-3.987	-0.001831	-3.7041	-0.0017011	459.23972142324425	47.477	1.3773	47.515	47.034	48.411	0.037731					78	43	2	0	0	0	0.36381	1	3556	3556		82.305	13.518	1	852740	+		7496	30148	5233	5239	8677	8677		441			0.007227362714729679
EPGRRLRK	8	Unmodified	_EPGRRLRK_					0	0	0			REV__nc|ENSG00000072195|Q15772-1|SPEG	REV__nc|ENSG00000072195|Q15772-1|SPEG	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3104248046875	2	506.312149	1010.60975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.451	1	60.568	60.068	61.068	0.11676								0	0	0	0.3037	1	5240	5240		18.324	1.8513	1		+		7497	16641	5234	5240	8678	8678					0.1048649575974423
EPGSDESESID	11	Unmodified	_EPGSDESESID_					0	0	0			REV__nc|ENSG00000006459|Q6ZMT4-2|KDM7A	REV__nc|ENSG00000006459|Q6ZMT4-2|KDM7A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3533325195312	2	582.73058	1163.44661	0.72484	0.00042239	3.6833	0.0021464	4.4082	0.0025688	582.7319596547898	103.2	0.38204	103.39	103.2	103.58	0.18298					12	9	2	0	0	0	0.17431	1	10920	10920		31.53	7.3271	1	97152	+		7498	16102	5235	5241	8679	8679					-0.1285786145392649
EPGSLLVP	8	Unmodified	_EPGSLLVP_					0	0	0			REV__nc|ENSG00000107789|Q9UNW1-3|MINPP1	REV__nc|ENSG00000107789|Q9UNW1-3|MINPP1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.78497314453125	2	406.231636	810.448719	-1.9586	-0.00079563	1.8034	0.00073259	-0.15518	-6.3039E-05	406.2322442679227	34.725	0.87415	34.725	34.416	35.29	0					27	23	2	0	0	0	0.4196	1	1915	1915		40.573	15.122	1	45810	+		7499	17674	5236	5242	8680	8680					0.035913086031428065
EPGTTPCQVMA	11	Unmodified	_EPGTTPCQVMA_					0	0	0		nc|ENSG00000111452|Q6QNK2-4|ADGRD1;nc|ENSG00000111452|Q6QNK2-3|ADGRD1;nc|ENSG00000111452|Q6QNK2-2|ADGRD1;ENSG00000111452|ENST00000261654|ADGRD1	nc|ENSG00000111452|Q6QNK2-4|ADGRD1	nc|ENSG00000111452|Q6QNK2-4|ADGRD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.36279296875	2	567.251917	1132.48928	-0.9386	-0.00053242	3.1033	0.0017603	2.1647	0.0012279	567.2515265302854	42.248	0.73055	42.946	42.65	43.381	0.69754					55	17	5	0	0	0	0.17226	1	3769	3769		35.152	5.982	1	706250			7500	14845	5237	5243	8681	8681					-0.07166461131055257
EPGTVIPL	8	Unmodified	_EPGTVIPL_					0	0	0		ENST00000440716.5_1_19:54871478-54875971:-|nuORF;nc|ENSG00000167613|Q6GTX8-4|LAIR1;nc|ENSG00000167613|Q6GTX8-3|LAIR1;nc|ENSG00000167613|Q6GTX8-2|LAIR1;ENSG00000167613|ENST00000391742|LAIR1	ENST00000440716.5_1_19:54871478-54875971:-|nuORF	ENST00000440716.5_1_19:54871478-54875971:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2372131347656	2	413.239461	824.46437	-0.18778	-7.7597E-05	-2.7175	-0.001123	-2.9053	-0.0012006	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.88915	1	7207	7207		35.201	1.6851	1	1747900			7501	11775	5238	5244	8682	8682					0.04511595120197853
EPGYELLGSD	10	Unmodified	_EPGYELLGSD_					0	0	0		nc|ENSG00000174938|Q6UXD5-2|SEZ6L2;nc|ENSG00000174938|Q6UXD5-3|SEZ6L2;nc|ENSG00000174938|Q6UXD5-5|SEZ6L2;nc|ENSG00000174938|Q6UXD5|SEZ6L2;ENSG00000174938|ENST00000617533|SEZ6L2;nc|ENSG00000174938|Q6UXD5-6|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	540.359619140625	2	540.248212	1078.48187	-1.4725	-0.00079553	-3.4735	-0.0018765	-4.946	-0.0026721	540.7487036399434	36.756	0.22101	36.756	36.69	36.911	0					6	4	2	0	0	0	0.37624	1	2165	2165		32.812	11.865	1	27587			7502	6973	5239	5245	8683	8683					-0.05423154135451114
EPHIRVLVTG	10	Unmodified	_EPHIRVLVTG_					0	0	0		ENSG00000142156|ENST00000361866|COL6A1;ENST00000498614.5_1_21:47421141-47423924:+|nuORF;ENST00000486023.1_1_21:47422428-47423924:+|nuORF	ENSG00000142156|ENST00000361866|COL6A1	ENSG00000142156|ENST00000361866|COL6A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.825927734375	2	560.827298	1119.64004	0.31128	0.00017458	-2.2307	-0.001251	-1.9194	-0.0010765	560.8258290332603	50.891	0.60448	50.923	50.638	51.243	0.032314					47	18	3	0	0	0	0.8651	1	4005	4005		25.574	0.12388	1	550950			7503	4544	5240	5246	8684	8684					0.08500809634256257
EPHKLLLLLAY	11	Unmodified	_EPHKLLLLLAY_					0	0	0			REV__ENSG00000165841|ENST00000371321|CYP2C19	REV__ENSG00000165841|ENST00000371321|CYP2C19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2679443359375	3	437.267463	1308.78056	-1.7231	-0.00075344	2.6013	0.0011375	0.87824	0.00038403	437.26850375985913	50.916	1.5264	50.916	50.06	51.586	0					171	39	5	0	0	0	0.74405	1	4032	4032		23.378	0.81632	1	3001200	+		7504	21227	5241	5247	8685	8685					0.13851968567882977
EPHKLLLLLAY	11	Unmodified	_EPHKLLLLLAY_					0	0	0			REV__ENSG00000165841|ENST00000371321|CYP2C19	REV__ENSG00000165841|ENST00000371321|CYP2C19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2684631347656	3	437.267463	1308.78056	-1.6775	-0.00073351	2.509	0.0010971	0.83146	0.00036357	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.76579	1	4599	4599		18.531	0	1	2305800	+		7505	21227	5241	5247	8686	8686					0.13851968567882977
EPHRRSPG	8	Unmodified	_EPHRRSPG_					0	0	0			REV__ENST00000593972.1_1_19:41305435-41306505:+|nuORF	REV__ENST00000593972.1_1_19:41305435-41306505:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.2423095703125	2	468.243932	934.473312	-1.6996	-0.00079582	4.1314	0.0019345	2.4318	0.0011387	468.24580139904907	47.359	0.58546	47.359	46.956	47.541	0					29	21	2	0	0	0	0.88185	1	3609	3609		32.812	2.3088	1	138620	+		7506	29233	5242	5248	8687	8687					0.0034538152923460075
EPHSAHRGCG	10	Carbamidomethyl (C)	_EPHSAHRGC(Carbamidomethyl (C))G_	EPHSAHRGC(1)G		EPHSAHRGC(74)G		0	1	0		ENST00000423716.1_1_8:52859255-52859531:+|nuORF	ENST00000423716.1_1_8:52859255-52859531:+|nuORF	ENST00000423716.1_1_8:52859255-52859531:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.239013671875	2	554.241064	1106.46757	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.243	1	43.676	43.176	44.176	0.4334								0	0	0	0.17988	1	3898	3898		74.255	10.949	1				7507	11502	5243	5249	8688	8688	147				-0.08140085044760781
EPIALLMSII	10	Unmodified	_EPIALLMSII_					0	0	0			REV__ENSG00000126010|ENST00000380289|GRPR	REV__ENSG00000126010|ENST00000380289|GRPR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3290405273438	2	550.325211	1098.63587	0.24684	0.00013584	3.3396	0.0018378	3.5864	0.0019737	550.327086838159	99.973	1.2029	100.19	99.606	100.81	0.21511					73	27	4	0	0	0	0.71042	1	10462	10462		44.117	3.5442	1	361560	+		7508	18691	5244	5250	8689	8689					0.09049584096351282
EPIANSNP	8	Unmodified	_EPIANSNP_					0	0	0			REV__nc|ENSG00000177324|Q8NDZ0-2|BEND2	REV__nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7071838378906	2	421.20615	840.397747	0.91181	0.00038406	1.1569	0.00048731	2.0688	0.00087137	421.2064716217976	16.843	0.25178	16.92	16.778	17.03	0.07715					15	9	2	0	0	0	0.91977	1	141	141		45.952	3.4775	1	69629	+		7509	22195	5245	5251	8690	8690					-0.02883640441712032
EPIANSNP	8	Unmodified	_EPIANSNP_					0	0	0			REV__nc|ENSG00000177324|Q8NDZ0-2|BEND2	REV__nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.204833984375	2	421.20615	840.397747	2.8476	0.0011994	-0.81289	-0.00034239	2.0347	0.00085701	421.20574107033804	17.037	0.26482	16.955	16.857	17.121	-0.0821					18	10	3	0	0	0	0.87479	1	198	198		30.504	1.3541	1	76827	+		7510	22195	5245	5251	8691	8691					-0.02883640441712032
EPIKLMIF	8	Unmodified	_EPIKLMIF_					0	0	0			REV__ENST00000497610.1_1_3:111805290-111828461:+|nuORF	REV__ENST00000497610.1_1_3:111805290-111828461:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.83270263671875	2	495.788264	989.561975	-2.1164	-0.0010493	4.2315	0.0020979	2.1151	0.0010486	495.79035795712457	43.35	0.3023	43.35	43.198	43.5	0.00016785					9	6	2	0	0	0	0.4196	1	3330	3330		24.203	0	1	30519	+		7511	18052	5246	5252	8692	8692					0.0667766072467657
EPIPPHVLGT	10	Unmodified	_EPIPPHVLGT_					0	0	0		nc|ENSG00000171804|Q6ZQQ6|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;ENSG00000171804|ENST00000447313|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2927856445312	2	530.295299	1058.57605	-0.066725	-3.5384E-05	-3.5889	-0.0019032	-3.6556	-0.0019386	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.85934	1	9139	9139		35.618	1.6967	1	2084800			7512	6711	5247	5253	8693	8693					0.049100294773325004
EPIQGKLRRK	10	Unmodified	_EPIQGKLRRK_					0	0	0			REV__nc|ENSG00000155959|P61758-2|VBP1	REV__nc|ENSG00000155959|P61758-2|VBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.9222717285156	3	408.922689	1223.74624	-0.18603	-7.607E-05	-0.74679	-0.00030538	-0.93282	-0.00038145	408.9223182552884	104.73	3.6152	104.72	103.66	107.27	-0.014809					241	85	5	0	0	0	0.86471	1	11357	11357		28.577	2.5133	1	2991100	+		7513	20456	5248	5254	8694	8694					0.1433156519960903
EPIQGKLRRK	10	Unmodified	_EPIQGKLRRK_					0	0	0			REV__nc|ENSG00000155959|P61758-2|VBP1	REV__nc|ENSG00000155959|P61758-2|VBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9222106933594	3	408.922689	1223.74624	-1.9234	-0.00078652	0.84702	0.00034637	-1.0764	-0.00044016	408.9230151046432	104.46	2.832	104.56	103.59	106.42	0.093857					212	70	5	0	0	0	0.8651	1	11069	11069		18.531	0.69791	1	2027500	+		7514	20456	5248	5254	8695	8695					0.1433156519960903
EPIRKRERRGG	11	Unmodified	_EPIRKRERRGG_					0	0	0			REV__ENST00000407142.5_2_22:22292737-22292923:-|nuORF	REV__ENST00000407142.5_2_22:22292737-22292923:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.9327087402344	3	451.932248	1352.77491	0.82688	0.0003737	0.12611	5.6993E-05	0.95299	0.00043069	451.9322387117762	100.27	1.763	100.6	99.729	101.49	0.33295					121	44	4	0	0	0	0.74771	1	12241	12241		22.562	0	1	816050	+		7515	26313	5249	5255	8696	8696					0.11263682828712263
EPISPDFYL	9	Unmodified	_EPISPDFYL_					0	0	0		ENST00000300403.10_1_20:30388876-30389098:+|nuORF	ENST00000300403.10_1_20:30388876-30389098:+|nuORF	ENST00000300403.10_1_20:30388876-30389098:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.7664794921875	2	540.76604	1079.51753	0.38191	0.00020652	-3.2132	-0.0017376	-2.8313	-0.0015311	540.7639824016669	49.748	1.0598	49.79	49.305	50.365	0.042236					35	25	2	0	0	0	0.43338	1	3864	3864		55.504	2.5675	1	187480			7516	9794	5250	5256	8697	8697					-0.019050718877906547
EPISPDFYL	9	Unmodified	_EPISPDFYL_					0	0	0		ENST00000300403.10_1_20:30388876-30389098:+|nuORF	ENST00000300403.10_1_20:30388876-30389098:+|nuORF	ENST00000300403.10_1_20:30388876-30389098:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	540.76604	1079.51753	-0.12067	-6.5252E-05	-2.9122	-0.0015748	-3.0329	-0.0016401	540.7642644040111	49.748	0.91899	49.655	49.23	50.149	-0.093178	-0.092392	6.6794E-05	NaN	55.504	33	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162750			7517	9794	5250	5256							-0.019050718877906547
EPISPIPSS	9	Unmodified	_EPISPIPSS_					0	0	0			REV__nc|ENSG00000166016|Q8N961-2|ABTB2	REV__nc|ENSG00000166016|Q8N961-2|ABTB2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.7467956542969	2	463.745108	925.475663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.339	1	24.339	23.839	24.839	0								0	0	0	0.2969	1	826	826		31.955	1.4512	1		+		7518	21243	5251	5257	8698	8698					0.00994372423679124
EPITFKFPQ	9	Unmodified	_EPITFKFPQ_					0	0	0			REV__ENSG00000196781|ENST00000376499|TLE1	REV__ENSG00000196781|ENST00000376499|TLE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7567749023438	2	553.797675	1105.5808	2.2642	0.0012539	-1.5771	-0.0008734	0.68705	0.00038049	553.7971287575549	25.199	0.35648	24.768	24.582	24.939	-0.4311					10	7	2	0	0	0	0.20789	1	1304	1304		25.574	15.389	1	30683	+		7519	23174	5252	5258	8699	8699					0.03222913620084
EPIVKLEEIQP	11	Unmodified	_EPIVKLEEIQP_					0	0	0			REV__ENSG00000080572|ENST00000372453|DNAAF6	REV__ENSG00000080572|ENST00000372453|DNAAF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	647.8660278320312	2	647.866285	1293.71802	2.0052	0.0012991	-1.6826	-0.0010901	0.32263	0.00020902	648.3671542684281	111.59	0.38932	111.63	111.39	111.78	0.041832					17	13	2	0	0	0	0.70737	1	13495	13495		30.318	1.1477	1	349060	+		7520	16805	5253	5259	8700	8700					0.08290777709021313
EPIVKLEEIQP	11	Unmodified	_EPIVKLEEIQP_					0	0	0			REV__ENSG00000080572|ENST00000372453|DNAAF6	REV__ENSG00000080572|ENST00000372453|DNAAF6	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	647.866285	1293.71802	0.94459	0.00061197	-2.0576	-0.001333	-1.113	-0.00072108	647.8645068607775	111.6	0.1643	111.67	111.59	111.76	0.069542	0.019258	-0.00021229	NaN	30.318	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217540	+		7521	16805	5253	5259							0.08290777709021313
EPIVKLEEIQP	11	Unmodified	_EPIVKLEEIQP_					0	0	0			REV__ENSG00000080572|ENST00000372453|DNAAF6	REV__ENSG00000080572|ENST00000372453|DNAAF6	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	647.866285	1293.71802	2.0052	0.0012991	-1.6826	-0.0010901	0.32263	0.00020902	648.3671542684281	111.59	0.38932	111.63	111.39	111.78	0.041832	-0.019258	0.00027361	NaN	30.318	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	349060	+		7522	16805	5253	5259							0.08290777709021313
EPIVKMFEDP	10	Unmodified	_EPIVKMFEDP_					0	0	0		ENST00000518442.5_1_8:109247181-109261015:-|nuORF;ENSG00000104408|ENST00000220849|EIF3E;chr8:108241913-108268246|54|11.59|0.63|4.21|-|ENST00000678797|EIF3E,EIF3E	ENST00000518442.5_1_8:109247181-109261015:-|nuORF	ENST00000518442.5_1_8:109247181-109261015:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	602.8015747070312	2	602.799557	1203.58456	0.97328	0.00058669	1.7006	0.0010251	2.6739	0.0016118	602.8004011190249	72.823	0.83628	72.952	72.522	73.358	0.12921					70	29	3	0	0	0	0.70553	1	6698	6698		44.377	12.847	1	532890			7523	509	5254	5260	8701	8701					-0.009087846683314638
EPIVKMFEDP	10	Unmodified	_EPIVKMFEDP_					0	0	0		ENST00000518442.5_1_8:109247181-109261015:-|nuORF;ENSG00000104408|ENST00000220849|EIF3E;chr8:108241913-108268246|54|11.59|0.63|4.21|-|ENST00000678797|EIF3E,EIF3E	ENST00000518442.5_1_8:109247181-109261015:-|nuORF	ENST00000518442.5_1_8:109247181-109261015:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	602.800048828125	2	602.799557	1203.58456	0.65075	0.00039227	1.9945	0.0012023	2.6453	0.0015946	602.8006043046089	72.774	0.78786	72.904	72.521	73.309	0.13064					71	26	4	0	0	0	0.47091	1	6666	6666		58.23	3.5076	1	436040			7524	509	5254	5260	8702	8702					-0.009087846683314638
EPIYIITEF	9	Unmodified	_EPIYIITEF_					0	0	0		nc|ENSG00000101336|P08631-3|HCK;nc|ENSG00000101336|P08631-2|HCK;nc|ENSG00000101336|P08631-4|HCK;ENSG00000101336|ENST00000375852|HCK	nc|ENSG00000101336|P08631-3|HCK	nc|ENSG00000101336|P08631-3|HCK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.7974243164062	2	562.79734	1123.58013	1.7902	0.0010075	-1.543	-0.0008684	0.24719	0.00013912	562.7962855560745	95.463	0.68761	95.884	95.546	96.234	0.42051					47	16	4	0	0	0	0.034856	2	11426	11413;11426		115.46	46.672	1	745720			7525	1931	5255	5261	8703;8704	8704					0.023280741803773708
EPIYIITEF	9	Unmodified	_EPIYIITEF_					0	0	0		nc|ENSG00000101336|P08631-3|HCK;nc|ENSG00000101336|P08631-2|HCK;nc|ENSG00000101336|P08631-4|HCK;ENSG00000101336|ENST00000375852|HCK	nc|ENSG00000101336|P08631-3|HCK	nc|ENSG00000101336|P08631-3|HCK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.7974853515625	2	562.79734	1123.58013	0.84743	0.00047693	-0.60288	-0.0003393	0.24455	0.00013763	562.7968722668916	95.571	0.8073	95.991	95.666	96.473	0.41963					52	19	4	0	0	0	0.12652	1	11476	11476		87.754	5.4493	1	846280			7526	1931	5255	5261	8705	8705					0.023280741803773708
EPIYIITEY	9	Unmodified	_EPIYIITEY_					0	0	0		nc|ENSG00000254087|P07948-2|LYN;ENSG00000254087|ENST00000519728|LYN;ENST00000469956.1_1_1:32741525-32742647:+|nuORF;nc|ENSG00000182866|P06239-2|LCK;ENST00000469765.5_1_1:32739930-32745396:+|nuORF;ENSG00000182866|ENST00000336890|LCK;nc|ENSG00000182866|P06239-3|LCK	nc|ENSG00000254087|P07948-2|LYN	nc|ENSG00000254087|P07948-2|LYN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.7948608398438	2	570.794798	1139.57504	-0.52902	-0.00030196	0.66978	0.00038231	0.14077	8.035E-05	570.7950388818623	84.029	0.85164	84.465	84.088	84.939	0.43538					58	20	4	0	0	0	0.034856	1	9783	9783		115.46	33.218	1	1890500			7527	8871	5256	5262	8706	8706					0.010837703177458025
EPIYIITEY	9	Unmodified	_EPIYIITEY_					0	0	0		nc|ENSG00000254087|P07948-2|LYN;ENSG00000254087|ENST00000519728|LYN;ENST00000469956.1_1_1:32741525-32742647:+|nuORF;nc|ENSG00000182866|P06239-2|LCK;ENST00000469765.5_1_1:32739930-32745396:+|nuORF;ENSG00000182866|ENST00000336890|LCK;nc|ENSG00000182866|P06239-3|LCK	nc|ENSG00000254087|P07948-2|LYN	nc|ENSG00000254087|P07948-2|LYN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.7948608398438	2	570.794798	1139.57504	0.474	0.00027056	-0.11202	-6.3941E-05	0.36198	0.00020662	570.7945601273274	84.083	1.0557	84.539	84.148	85.204	0.45555					70	25	4	0	0	0	0.034856	1	9816	9816		115.46	49.03	1	2072000			7528	8871	5256	5262	8707	8707					0.010837703177458025
EPIYIVTEY	9	Unmodified	_EPIYIVTEY_					0	0	0		nc|ENSG00000010810|P06241-3|FYN;nc|ENSG00000010810|P06241-2|FYN;ENSG00000010810|ENST00000354650|FYN;ENST00000471959.2_1_6:112015889-112017729:-|nuORF;ENST00000467556.1_1_20:36028555-36030207:+|nuORF;ENST00000477066.5_1_20:36025122-36031779:+|nuORF;ENSG00000197122|ENST00000373578|SRC;nc|ENSG00000197122|P12931-2|SRC;chr20:37386477-37393895|21|14.1|0.86|4.03|+|ENST00000373558|SRC,SRC;nc|ENSG00000197122|P12931-3|SRC;ENSG00000136573|ENST00000259089|BLK	nc|ENSG00000010810|P06241-3|FYN;ENSG00000136573|ENST00000259089|BLK	nc|ENSG00000010810|P06241-3|FYN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.7871704101562	2	563.786973	1125.55939	0.37526	0.00021157	-0.50127	-0.00028261	-0.12601	-7.1041E-05	563.7865917691684	78.668	0.84901	79.079	78.76	79.609	0.4106					36	19	2	0	0	0	0.021087	2	8985	8976;8985		124.59	58.791	1	1224700			7529	773;4121	5257	5263	8708;8709	8709					0.001634838007248618
EPIYIVTEY	9	Unmodified	_EPIYIVTEY_					0	0	0		nc|ENSG00000010810|P06241-3|FYN;nc|ENSG00000010810|P06241-2|FYN;ENSG00000010810|ENST00000354650|FYN;ENST00000471959.2_1_6:112015889-112017729:-|nuORF;ENST00000467556.1_1_20:36028555-36030207:+|nuORF;ENST00000477066.5_1_20:36025122-36031779:+|nuORF;ENSG00000197122|ENST00000373578|SRC;nc|ENSG00000197122|P12931-2|SRC;chr20:37386477-37393895|21|14.1|0.86|4.03|+|ENST00000373558|SRC,SRC;nc|ENSG00000197122|P12931-3|SRC;ENSG00000136573|ENST00000259089|BLK	nc|ENSG00000010810|P06241-3|FYN;ENSG00000136573|ENST00000259089|BLK	nc|ENSG00000010810|P06241-3|FYN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.787841796875	2	563.786973	1125.55939	0.38524	0.00021719	-0.12789	-7.2105E-05	0.25734	0.00014509	563.7867894601941	78.537	0.97257	79.1	78.784	79.757	0.56332					38	22	2	0	0	0	0.041233	2	8995	8995;9007		111.65	71.076	1	1235200			7530	773;4121	5257	5263	8710;8711	8710					0.001634838007248618
EPKAGRRLK	9	Unmodified	_EPKAGRRLK_					0	0	0			REV__ENSG00000010292|ENST00000315579|NCAPD2	REV__ENSG00000010292|ENST00000315579|NCAPD2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	527.667236328125	2	527.827632	1053.64071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.772	1	68.837	68.337	69.337	0.065506								0	0	0	0.31117	1	6182	6182		26.693	3.6504	1		+		7531	16161	5258	5264	8712	8712					0.11603649073981614
EPKFAVVKAS	10	Unmodified	_EPKFAVVKAS_					0	0	0			REV__ENSG00000148357|ENST00000683500|HMCN2	REV__ENSG00000148357|ENST00000683500|HMCN2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3268432617188	2	538.310949	1074.60735	-0.54368	-0.00029267	-2.1305	-0.0011469	-2.6742	-0.0014395	538.307655512026	101.3	0.80003	101.3	100.82	101.62	0					22	18	3	0	0	0	0.37624	1	10317	10317		45.022	11.101	1	264070	+		7532	20112	5259	5265	8713	8713					0.0730260251141317
EPKFSGDLEK	10	Unmodified	_EPKFSGDLEK_					0	0	0			REV__nc|ENSG00000020219|A6NM43|CCT8L1P	REV__nc|ENSG00000020219|A6NM43|CCT8L1P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.2938842773438	2	575.292953	1148.57135	-0.40049	-0.0002304	-0.96308	-0.00055405	-1.3636	-0.00078445	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.42897	1	8751	8751		61.691	1.573	1	1396200	+		7533	23327	5260	5266	8714	8714					0.003011005439020664
EPKKLALL	8	Unmodified	_EPKKLALL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30108642578125	2	456.299853	910.585153	0.16746	7.6412E-05	2.7809	0.0012689	2.9484	0.0013454	456.30098393638264	34.91	1.4474	35.016	34.575	36.022	0.10603					127	53	3	0	0	0	0.83466	1	1784	1784		23.037	2.5549	1	751300	+		7534	19958	5261	5267	8715	8715					0.1262842283365444
EPKLAGDS	8	Unmodified	_EPKLAGDS_					0	0	0			REV__ENSG00000006432|ENST00000554752|MAP3K9	REV__ENSG00000006432|ENST00000554752|MAP3K9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.7091064453125	2	408.708525	815.402498	2.9539	0.0012073	-0.79517	-0.00032499	2.1587	0.00088229	408.7080768116846	16.526	0.29012	16.443	16.347	16.637	-0.083363					15	12	2	0	0	0	0.91977	1	147	147		45.952	7.1458	1	90416	+		7535	16101	5262	5268	8716	8716					-0.012587562989438084
EPKLSDETFI	10	Unmodified	_EPKLSDETFI_					0	0	0			REV__ENSG00000172986|ENST00000389617|GXYLT2	REV__ENSG00000172986|ENST00000389617|GXYLT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.7557983398438	2	589.800611	1177.58667	-0.55992	-0.00033024	-0.16162	-9.5325E-05	-0.72155	-0.00042557	589.7999137867274	51.812	0.37703	52.247	52.075	52.452	0.43505					12	8	2	0	0	0	0.37624	1	5187	5187		37.812	0	1	141890	+		7536	21875	5263	5269	8717	8717					0.004979673410844043
EPKRKKGT	8	Unmodified	_EPKRKKGT_					0	0	0			REV__ENST00000409891.5_1_2:175431793-175431907:-|nuORF	REV__ENST00000409891.5_1_2:175431793-175431907:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2874755859375	2	472.287808	942.561064	-0.91025	-0.0004299	1.4853	0.00070148	0.57502	0.00027158	472.2885293382865	99.077	1.813	99.3	98.699	100.51	0.22263					102	42	3	0	0	0	0.8347	1	10320	10320		23.042	0	1	580890	+		7537	26358	5264	5270	8718	8718					0.08748582400005489
EPKVTTFN	8	Unmodified	_EPKVTTFN_					0	0	0			REV__ENST00000565532.5_1_16:66762088-66770076:-|nuORF	REV__ENST00000565532.5_1_16:66762088-66770076:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2449951171875	2	468.245275	934.475997	-0.76235	-0.00035697	0.76559	0.00035848	0.0032383	1.5163E-06	468.24549296496195	47.46	2.028	47.434	46.94	48.968	-0.026737					112	56	3	0	0	0	0.88944	1	3997	3997		57.811	5.5121	1	1887700	+		7538	19241	5265	5271	8719	8719					0.006137921435083626
EPLAAVLRLRQ	11	Unmodified	_EPLAAVLRLRQ_					0	0	0		ENSG00000178385|ENST00000427836|PLEKHM3;nc|ENSG00000178385|Q6ZWE6-2|PLEKHM3	ENSG00000178385|ENST00000427836|PLEKHM3	ENSG00000178385|ENST00000427836|PLEKHM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59271240234375	3	422.594461	1264.76155	-0.62547	-0.00026432	-2.6174	-0.0011061	-3.2429	-0.0013704	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.74771	1	4877	4877		22.562	0	1	1069500			7539	7203	5266	5272	8720	8720					0.13976431996775318
EPLAAVLRLRQ	11	Unmodified	_EPLAAVLRLRQ_					0	0	0		ENSG00000178385|ENST00000427836|PLEKHM3;nc|ENSG00000178385|Q6ZWE6-2|PLEKHM3	ENSG00000178385|ENST00000427836|PLEKHM3	ENSG00000178385|ENST00000427836|PLEKHM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.59271240234375	3	422.594461	1264.76155	-1.8117	-0.0007656	-1.6807	-0.00071027	-3.4924	-0.0014759	422.59357864263933	54.504	2.542	54.559	53.757	56.299	0.055611					235	90	4	0	0	0	0.76579	2	4501	4501;4572		18.531	2.9211	1	1177200			7540	7203	5266	5272	8721;8722	8721					0.13976431996775318
EPLAGLRVF	9	Unmodified	_EPLAGLRVF_					0	0	0		ENST00000413380.5_2_7:18535349-18535451:+|nuORF	ENST00000413380.5_2_7:18535349-18535451:+|nuORF	ENST00000413380.5_2_7:18535349-18535451:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2903137207031	2	501.292559	1000.57057	-0.45423	-0.0002277	-3.8659	-0.001938	-4.3202	-0.0021657	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.76255	1	10458	10458		35.618	0.41757	1	9727400			7541	11351	5267	5273	8723	8723					0.07030350685522535
EPLAKNQT	8	Unmodified	_EPLAKNQT_					0	0	0			REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.9225158691406	2	450.742899	899.471246	2.2156	0.00099867	-0.94946	-0.00042796	1.2661	0.0005707	450.7419612899627	24.936	0.62416	24.422	24.099	24.724	-0.51365					19	13	2	0	0	0	0.4196	1	1209	1209		17.365	7.0997	1	44062	+		7542	19449	5268	5274	8724	8724					0.017489080007635494
EPLAKNQT	8	Unmodified	_EPLAKNQT_					0	0	0			REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	450.742899	899.471246	0.06819	3.0736E-05	-2.0649	-0.00093075	-1.9967	-0.00090002	450.7413903658296	24.701	0.067057	24.801	24.761	24.828	0.10045	0.18933	-0.00061343	NaN	17.365	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21429	+		7543	19449	5268	5274							0.017489080007635494
EPLAVVGSV	9	Unmodified	_EPLAVVGSV_					0	0	0			REV__ENSG00000235631|ENST00000434824|RNF148	REV__ENSG00000235631|ENST00000434824|RNF148	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3002014160156	2	435.750193	869.485833	0.046911	2.0441E-05	3.0297	0.0013202	3.0766	0.0013406	435.75136949427525	68.691	1.1278	69.238	68.616	69.744	0.54693					60	26	3	0	0	0	0.20789	1	7642	7642		29.15	0	1	257730	+		7544	23783	5269	5275	8725	8725					0.04586980148917519
EPLDIKAAL	9	Unmodified	_EPLDIKAAL_					0	0	0			REV__nc|ENSG00000007372|P26367|PAX6	REV__nc|ENSG00000007372|P26367|PAX6	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.28704833984375	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.531	1	41.536	41.036	42.036	0.0043983								0	0	0	0.34972	1	2722	2722		47.657	12.039	1		+		7545	16122	5270	5276	8726	8726					0.06871224728752168
EPLEAEAR	8	Unmodified	_EPLEAEAR_					0	0	0		ENSG00000166428|ENST00000392593|PLD4	ENSG00000166428|ENST00000392593|PLD4	ENSG00000166428|ENST00000392593|PLD4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.7322998046875	2	457.732532	913.45051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.018	1	30.046	29.546	30.546	0.028618								0	0	0	0.28057	1	1934	1934		55.504	2.1528	1				7546	6194	5271	5277	8727	8727					-0.009676823789050104
EPLEYDEAER	10	Unmodified	_EPLEYDEAER_					0	0	0			REV__ENSG00000116544|ENST00000373347|DLGAP3	REV__ENSG00000116544|ENST00000373347|DLGAP3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.9158020019531	3	417.522697	1249.54626	-0.49413	-0.00020631	-1.5299	-0.00063875	-2.024	-0.00084506	417.52175337696065	30.568	0.70826	30.596	30.362	31.07	0.028618					26	15	3	0	0	0	0.37624	1	2026	2026		30.569	14.562	1	118860	+		7547	18202	5272	5278	8728	8728					-0.06852999049351638
EPLGIQLLIP	10	Unmodified	_EPLGIQLLIP_					0	0	0			REV__nc|ENSG00000022567|Q5BKX6|SLC45A4	REV__nc|ENSG00000022567|Q5BKX6|SLC45A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.839599609375	2	546.8368	1091.65905	2.1574	0.0011797	3.8395	0.0020996	5.9968	0.0032793	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.85934	1	12352	12352		35.618	1.4457	1	10074000	+		7548	16244	5273	5279	8729	8729					0.11688346205346534
EPLGNVRLSDP	11	Unmodified	_EPLGNVRLSDP_					0	0	0			REV__ENST00000449684.6_1_2:109237798-109277146:+|nuORF	REV__ENST00000449684.6_1_2:109237798-109277146:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.8228759765625	2	598.817127	1195.6197	-0.55429	-0.00033192	3.4351	0.002057	2.8808	0.0017251	598.8192924084227	71.422	0.39654	71.456	71.322	71.718	0.034004					27	16	2	0	0	0	0.67778	1	6783	6783		35.152	0	1	126800	+		7549	26857	5274	5280	8730	8730					0.029715941838276194
EPLGRRKKQL	10	Unmodified	_EPLGRRKKQL_					0	0	0		nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;ENSG00000070182|ENST00000644917|SPTB	nc|ENSG00000070182|P11277-3|SPTB	nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	613.383544921875	2	612.880396	1223.74624	1.1743	0.00071971	-2.5584	-0.001568	-1.3841	-0.00084828	612.878611922605	104.31	3.5817	104.48	103.81	107.39	0.17096					311	89	7	0	0	0	0.86718	1	11028	11028		27.882	1.1893	1	83708000			7550	1234	5275	5281	8731	8731					0.1433156519960903
EPLGSPAHE	9	Unmodified	_EPLGSPAHE_					0	0	0		ENSG00000174576|ENST00000311034|NPAS4	ENSG00000174576|ENST00000311034|NPAS4	ENSG00000174576|ENST00000311034|NPAS4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.7223815917969	2	468.724707	935.43486	0.4939	0.0002315	-3.488	-0.0016349	-2.9941	-0.0014034	468.72287741489856	69.82	0.72598	69.949	69.77	70.496	0.1291					62	36	2	0	0	0	0.74721	1	6372	6372		37.159	12.956	1	1036600			7551	6948	5276	5282	8732	8732					-0.03543968895951366
EPLGSPAHE	9	Unmodified	_EPLGSPAHE_					0	0	0		ENSG00000174576|ENST00000311034|NPAS4	ENSG00000174576|ENST00000311034|NPAS4	ENSG00000174576|ENST00000311034|NPAS4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.722900390625	2	468.724707	935.43486	-1.3692	-0.00064178	-1.4353	-0.00067274	-2.8045	-0.0013145	468.72390435574425	78.099	1.043	78.193	77.873	78.916	0.0942					75	34	3	0	0	0	0.76255	1	7314	7314		35.618	1.4457	1	698450			7552	6948	5276	5282	8733	8733					-0.03543968895951366
EPLGVGRCC	9	Unmodified	_EPLGVGRCC_					0	0	0		ENST00000503560.1_1_16:89753633-89755688:+|nuORF;ENST00000504473.5_1_16:89753600-89759778:+|nuORF	ENST00000503560.1_1_16:89753633-89755688:+|nuORF	ENST00000503560.1_1_16:89753633-89755688:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.2332458496094	2	467.21768	932.420807	0.48691	0.00022749	3.3272	0.0015545	3.8141	0.001782	467.21994681391817	69.321	0.060532	69.45	69.417	69.477	0.1291					4	2	2	0	0	0	0.20789	1	6270	6270		31.955	8.9124	1	78395			7553	12884	5277	5283	8734	8734					-0.04810660920247756
EPLHVIPPL	9	Unmodified	_EPLHVIPPL_					0	0	0			REV__nc|ENSG00000174844|Q6ZR08|DNAH12;REV__ENSG00000174844|ENST00000495027|DNAH12	REV__nc|ENSG00000174844|Q6ZR08|DNAH12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2806091308594	2	507.80276	1013.59097	0.6975	0.00035419	-0.66911	-0.00033977	0.02839	1.4416E-05	507.8022894098324	88.769	0.69426	89.218	88.793	89.487	0.44892					28	16	2	0	0	0	0.20789	1	10486	10486		25.45	0	1	299460	+		7554	30045;22019	5278	5284	8735	8735					0.08471521345325073
EPLIVGLLS	9	Unmodified	_EPLIVGLLS_					0	0	0		ENST00000478979.5_1_16:774909-776367:-|nuORF;nc|ENSG00000162004|A2IDD5-6|CCDC78;nc|ENSG00000162004|A2IDD5-3|CCDC78;nc|ENSG00000162004|A2IDD5-5|CCDC78;ENST00000482878.5_1_16:774909-776367:-|nuORF	ENST00000478979.5_1_16:774909-776367:-|nuORF	ENST00000478979.5_1_16:774909-776367:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.78887939453125	2	470.789318	939.564084	-1.99	-0.00093688	2.4979	0.001176	0.50792	0.00023912	470.790413758144	39.989	1.3369	40.578	39.606	40.942	0.58915					54	31	3	0	0	0	0.78536	1	3400	3400		29.15	0.89528	1	863510			7555	12400	5279	5285	8736	8736					0.09188412734147278
EPLIVGLLS	9	Unmodified	_EPLIVGLLS_					0	0	0		ENST00000478979.5_1_16:774909-776367:-|nuORF;nc|ENSG00000162004|A2IDD5-6|CCDC78;nc|ENSG00000162004|A2IDD5-3|CCDC78;nc|ENSG00000162004|A2IDD5-5|CCDC78;ENST00000482878.5_1_16:774909-776367:-|nuORF	ENST00000478979.5_1_16:774909-776367:-|nuORF	ENST00000478979.5_1_16:774909-776367:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	470.789318	939.564084	-1.2545	-0.00059063	1.4195	0.00066828	0.16495	7.7656E-05	470.7899782100263	40.788	1.2759	40.747	39.712	40.988	-0.04081	0.13522	-0.0007431	NaN	29.15	44	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189770			7556	12400	5279	5285							0.09188412734147278
EPLIVGLLS	9	Unmodified	_EPLIVGLLS_					0	0	0		ENST00000478979.5_1_16:774909-776367:-|nuORF;nc|ENSG00000162004|A2IDD5-6|CCDC78;nc|ENSG00000162004|A2IDD5-3|CCDC78;nc|ENSG00000162004|A2IDD5-5|CCDC78;ENST00000482878.5_1_16:774909-776367:-|nuORF	ENST00000478979.5_1_16:774909-776367:-|nuORF	ENST00000478979.5_1_16:774909-776367:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	470.789318	939.564084	-1.0405	-0.00048984	1.4577	0.00068628	0.41726	0.00019644	470.78997614399213	40.663	0.71742	40.668	40.194	40.912	0.0043983	0.056242	-0.00070709	NaN	29.15	36	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	117220			7557	12400	5279	5285							0.09188412734147278
EPLKDVVLI	9	Unmodified	_EPLKDVVLI_					0	0	0		nc|ENSG00000286095|A0A087WV53|SPEGNB	nc|ENSG00000286095|A0A087WV53|SPEGNB	nc|ENSG00000286095|A0A087WV53|SPEGNB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3191528320312	2	513.3157	1024.61685	-0.0063971	-3.2837E-06	2.3192	0.0011905	2.3128	0.0011872	513.3168980017223	55.245	1.1626	55.238	54.853	56.015	-0.0077057					50	31	3	0	0	0	0.78983	1	4938	4938		27.882	4.8398	1	234670			7558	15332	5280	5286	8737	8737					0.10552370796949617
EPLKGQLKRR	10	Unmodified	_EPLKGQLKRR_					0	0	0			REV__ENSG00000178921|ENST00000314666|PFAS	REV__ENSG00000178921|ENST00000314666|PFAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.922119140625	3	408.922689	1223.74624	2.7179	0.0011114	-3.8241	-0.0015638	-1.1062	-0.00045236	408.92110256360985	104.72	4.0561	104.68	103.08	107.14	-0.04039					239	96	4	0	0	0	0.86471	1	11586	11586		22.562	0	1	3838400	+		7559	22301	5281	5287	8738	8738					0.1433156519960903
EPLKKVPG	8	Unmodified	_EPLKKVPG_					0	0	0			REV__nc|ENSG00000108439|Q9NVS9-3|PNPO	REV__nc|ENSG00000108439|Q9NVS9-3|PNPO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7802734375	2	434.268553	866.522553	1.3208	0.00057357	0.60818	0.00026411	1.9289	0.00083768	434.26888209679606	33.469	0.16918	33.681	33.609	33.778	0.21168					5	3	2	0	0	0	0.4196	1	2440	2440		12.959	0	1	50356	+		7560	17711	5282	5288	8739	8739					0.08395276765475046
EPLKLERKAPK	11	Unmodified	_EPLKLERKAPK_					0	0	0		ENST00000578258.5_1_17:15604467-15614659:+|nuORF;ENST00000585171.5_1_17:15603407-15638248:+|nuORF;nc|ENSG00000187607|Q9HBT8-2|ZNF286A;ENSG00000187607|ENST00000583566|ZNF286A	ENST00000578258.5_1_17:15604467-15614659:+|nuORF	ENST00000578258.5_1_17:15604467-15614659:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.94049072265625	3	436.938117	1307.79252	0.92934	0.00040606	1.962	0.00085727	2.8913	0.0012633	437.27287153455126	55.326	1.2948	55.353	54.851	56.146	0.027142					42	32	2	0	0	0	0.73277	1	4953	4953		25.892	2.5138	1	482690			7561	7863	5283	5289	8740	8740					0.15093585311024071
EPLKLERKAPK	11	Unmodified	_EPLKLERKAPK_					0	0	0		ENST00000578258.5_1_17:15604467-15614659:+|nuORF;ENST00000585171.5_1_17:15603407-15638248:+|nuORF;nc|ENSG00000187607|Q9HBT8-2|ZNF286A;ENSG00000187607|ENST00000583566|ZNF286A	ENST00000578258.5_1_17:15604467-15614659:+|nuORF	ENST00000578258.5_1_17:15604467-15614659:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.274658203125	3	436.938117	1307.79252	-0.34593	-0.00015115	4.1205	0.0018004	3.7746	0.0016493	436.9397797202756	46.5	1.3452	46.421	46.006	47.352	-0.079006					113	38	4	0	0	0	0.73647	1	3425	3425		25.068	7.2346	1	942420			7562	7863	5283	5289	8741	8741					0.15093585311024071
EPLKLTLV	8	Unmodified	_EPLKLTLV_					0	0	0			REV__ENST00000460159.1_1_6:110746078-110746521:-|nuORF	REV__ENST00000460159.1_1_6:110746078-110746521:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7925720214844	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.8347	1	3931	3931		23.042	1.0826	1	186860	+		7563	16064	5284	5290	8742	8742					0.10984716596749422
EPLKRFFS	8	Unmodified	_EPLKRFFS_					0	0	0			REV__nc|ENSG00000275832|Q9P227-2|ARHGAP23;REV__ENSG00000107863|ENST00000396432|ARHGAP21	REV__ENSG00000107863|ENST00000396432|ARHGAP21	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.7509155273438	2	512.284734	1022.55492	-0.053158	-2.7232E-05	-0.059809	-3.0639E-05	-0.11297	-5.7871E-05	512.2846098600054	71.276	0.46269	71.31	71.17	71.633	0.034004					24	20	2	0	0	0	0.4196	1	6732	6732		35.201	9.7505	1	54516	+		7564	24014;17680	5285	5291	8743	8743					0.044540641684761795
EPLLDKLI	8	Unmodified	_EPLLDKLI_					0	0	0			REV__nc|ENSG00000096717|Q96EB6-2|SIRT1	REV__nc|ENSG00000096717|Q96EB6-2|SIRT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7893981933594	2	470.789318	939.564084	-1.7868	-0.00084119	3.031	0.001427	1.2443	0.00058579	470.7906139736521	40.476	1.2312	40.476	39.584	40.815	0					64	34	2	0	0	0	0.91005	1	2621	2621		42.474	3.6683	1	120330	+		7565	17078	5286	5292	8744	8744					0.09188412734147278
EPLLEIVK	8	Unmodified	_EPLLEIVK_					0	0	0			REV__ENSG00000118873|ENST00000358951|RAB3GAP2	REV__ENSG00000118873|ENST00000358951|RAB3GAP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7892761230469	2	470.789318	939.564084	-1.7868	-0.00084119	3.031	0.001427	1.2443	0.00058579	470.7906139736521	40.476	1.2312	40.476	39.584	40.815	0					64	34	2	0	0	0	0.88915	1	2635	2635		35.201	3.2459	1	120330	+		7566	18329	5287	5293	8745	8745					0.09188412734147278
EPLLLLGG	8	Unmodified	_EPLLLLGG_					0	0	0		ENST00000337471.8_1_22:22379928-22380309:-|nuORF	REV__ENSG00000074755|ENST00000381638|ZZEF1	REV__ENSG00000074755|ENST00000381638|ZZEF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2481689453125	2	406.249829	810.485105	0.64458	0.00026186	-3.2845	-0.0013343	-2.6399	-0.0010725	406.248379767224	90.786	2.0194	90.94	90.429	92.448	0.15388					81	48	3	0	0	0	0.82464	1	9118	9118		21.702	0	1	878080	+		7567	16695	5288	5294	8746	8746					0.07228185499855044
EPLLNRLKRL	10	Unmodified	_EPLLNRLKRL_					0	0	0			REV__ENSG00000114650|ENST00000265565|SCAP	REV__ENSG00000114650|ENST00000265565|SCAP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3793334960938	2	626.398422	1250.78229	0.9303	0.00058274	0.48001	0.00030068	1.4103	0.00088342	626.3991713903034	105.37	0.25774	105.41	105.21	105.47	0.038322					8	5	2	0	0	0	0.37624	1	11483	11483		19.997	9.7315	1	163110	+		7568	18058	5289	5295	8747	8747					0.16693022376489353
EPLLPIELVKT	11	Unmodified	_EPLLPIELVKT_					0	0	0			REV__ENST00000569766.5_1_16:68118971-68260371:+|nuORF	REV__ENST00000569766.5_1_16:68118971-68260371:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.297607421875	3	417.923473	1250.74859	-1.8243	-0.00076242	-4.3189	-0.001805	-6.1432	-0.0025674	417.9215325329428	72.329	0.16249	72.46	72.306	72.468	0.13145					6	5	2	0	0	0	0.17272	1	6612	6612		20.315	0	1	20612	+		7569	16653	5290	5296	8748	8748					0.13324556094039508
EPLLSRVQA	9	Unmodified	_EPLLSRVQA_					0	0	0		ENST00000586796.1_1_17:40739748-40761384:-|nuORF;ENSG00000141699|ENST00000309428|RETREG3	ENST00000586796.1_1_17:40739748-40761384:-|nuORF	ENST00000586796.1_1_17:40739748-40761384:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.7926025390625	2	506.792924	1011.57129	-0.7346	-0.00037229	0.6927	0.00035106	-0.041902	-2.1236E-05	506.79320637586767	31.375	0.64964	31.455	31.121	31.771	0.079834					34	14	4	0	0	0	0.69624	1	2123	2123		40.778	0.20554	1	321230			7570	4525	5291	5297	8749	8749					0.06597145334569632
EPLPPFEN	8	Unmodified	_EPLPPFEN_					0	0	0		ENST00000475922.1_1_2:11959598-11964914:+|nuORF;nc|ENSG00000134324|Q14693|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;ENST00000487576.1_1_2:11963299-11964914:+|nuORF	ENST00000475922.1_1_2:11959598-11964914:+|nuORF	ENST00000475922.1_1_2:11959598-11964914:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7547912597656	2	471.732	941.449448	-1.5507	-0.0007315	-1.4052	-0.00066286	-2.9558	-0.0013944	471.7312703409686	47.458	0.54279	48.381	48.12	48.663	0.92315					19	13	2	0	0	0	0.4196	1	4540	4540		47.916	7.343	1	269050			7571	3929	5292	5298	8750	8750					-0.023618967478114428
EPLPPGVVAKL	11	Unmodified	_EPLPPGVVAKL_					0	0	0			REV__ENST00000460485.1_1_2:128047028-128047064:-|nuORF	REV__ENST00000460485.1_1_2:128047028-128047064:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3395385742188	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.69995	1	12624	12624		31.53	10.583	1	4071000	+		7572	27004	5293	5299	8751	8751					0.11535748579603933
EPLQPKGV	8	Unmodified	_EPLQPKGV_					0	0	0			REV__ENST00000594816.1_1_19:58941830-58942172:-|nuORF	REV__ENST00000594816.1_1_19:58941830-58942172:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7802734375	2	434.25036	866.486168	1.2834	0.00055732	-0.97359	-0.00042278	0.30981	0.00013453	434.24978692490504	33.28	0.7571	33.492	33.102	33.859	0.21168					28	17	2	0	0	0	0.4196	1	2440	2440		12.959	0.75233	1	309890	+		7573	29240	5294	5300	8752	8752					0.04758399868774177
EPMLLLPLGLR	11	Unmodified	_EPMLLLPLGLR_					0	0	0			REV__ENSG00000170892|ENST00000396388|TSEN34	REV__ENSG00000170892|ENST00000396388|TSEN34	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3803100585938	2	626.378309	1250.74206	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.53	1	114.47	113.97	114.97	-0.05722								0	0	0	0.56276	1	12251	12251		20.947	0.95016	1		+		7574	21696	5295	5301	8753	8753					0.1267233966166259
EPMPTLIAE	9	Unmodified	_EPMPTLIAE_					0	0	0			REV__ENST00000523711.5_1_8:1824717-1874701:+|nuORF	REV__ENST00000523711.5_1_8:1824717-1874701:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.7550354003906	2	500.754618	999.494683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.504	1	71.538	71.038	72.038	0.034004								0	0	0	0.29103	1	6778	6778		40.573	4.9543	1		+		7575	17468	5296	5302	8754	8754					-0.005084142769192113
EPNANALH	8	Unmodified	_EPNANALH_					0	0	0			REV__ENSG00000163312|ENST00000295488|HELQ	REV__ENSG00000163312|ENST00000295488|HELQ	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.2557373046875	2	433.211766	864.40898	0.73505	0.00031843	-3.2678	-0.0014156	-2.5327	-0.0010972	433.2094132425567	107.16	0.50825	107.25	106.95	107.46	0.091255					20	12	2	0	0	0	0.4196	1	11488	11488		38.806	0	1	159770	+		7576	20896	5297	5303	8755	8755					-0.028648183475752376
EPNPGLASG	9	Unmodified	_EPNPGLASG_					0	0	0			REV__ENSG00000188112|ENST00000341865|C6orf132	REV__ENSG00000188112|ENST00000341865|C6orf132	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.2068176269531	2	421.20615	840.397747	0.37768	0.00015908	1.6419	0.00069157	2.0195	0.00085065	421.2066710063946	17.505	0.28164	16.895	16.752	17.034	-0.6107					14	6	3	0	0	0	0.6204	1	281	281		45.972	0.020292	1	198220	+		7577	22979	5298	5304	8756	8756					-0.028836404417006634
EPNPGLASG	9	Unmodified	_EPNPGLASG_					0	0	0			REV__ENSG00000188112|ENST00000341865|C6orf132	REV__ENSG00000188112|ENST00000341865|C6orf132	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	421.20615	840.397747	0.91181	0.00038406	1.1569	0.00048731	2.0688	0.00087137	421.2064716217976	16.843	0.25178	16.92	16.778	17.03	0.07715	-0.019827	-0.00041762	NaN	45.972	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69629	+		7578	22979	5298	5304							-0.028836404417006634
EPNPGLASG	9	Unmodified	_EPNPGLASG_					0	0	0			REV__ENSG00000188112|ENST00000341865|C6orf132	REV__ENSG00000188112|ENST00000341865|C6orf132	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	421.20615	840.397747	2.8476	0.0011994	-0.81289	-0.00034239	2.0347	0.00085701	421.20574107033804	17.037	0.26482	16.955	16.857	17.121	-0.0821	0.014229	-0.002077	NaN	45.972	18	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76827	+		7579	22979	5298	5304							-0.028836404417006634
EPNPGLASG	9	Unmodified	_EPNPGLASG_					0	0	0			REV__ENSG00000188112|ENST00000341865|C6orf132	REV__ENSG00000188112|ENST00000341865|C6orf132	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	421.20615	840.397747	-1.8914	-0.00079667	3.8906	0.0016388	1.9992	0.00084208	421.20773863089596	16.924	0.21457	16.97	16.869	17.084	0.0457	0.029565	0.0018853	NaN	45.972	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67136	+		7580	22979	5298	5304							-0.028836404417006634
EPNVVAPCI	9	Unmodified	_EPNVVAPCI_					0	0	0			REV__nc|ENSG00000165219|Q14C86-4|GAPVD1	REV__nc|ENSG00000165219|Q14C86-4|GAPVD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.24261474609375	2	471.241678	940.468803	0.94832	0.00044689	3.3435	0.0015756	4.2918	0.0020225	471.243171462268	85.882	3.6525	85.808	84.627	88.28	-0.073761					151	84	2	0	0	0	0.77546	1	8798	8798		31.955	4.0726	1	287660	+		7581	21164	5299	5305	8757	8757					-0.003812637285591336
EPPAGLTTSNF	11	Unmodified	_EPPAGLTTSNF_					0	0	0		ENSG00000141219|ENST00000535032|C17orf80;nc|ENSG00000141219|Q9BSJ5-3|MTNAP1	ENSG00000141219|ENST00000535032|C17orf80	ENSG00000141219|ENST00000535032|C17orf80	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.277099609375	2	567.277303	1132.54005	-0.72335	-0.00041034	-0.6461	-0.00036652	-1.3694	-0.00077686	567.276660925346	73.187	0.47729	73.574	73.25	73.727	0.38779					15	11	2	0	0	0	0.53361	1	8217	8217		49.536	5.1589	1	280850			7582	4483	5300	5306	8758	8758					-0.020914724902013404
EPPAGLTTSNF	11	Unmodified	_EPPAGLTTSNF_					0	0	0		ENSG00000141219|ENST00000535032|C17orf80;nc|ENSG00000141219|Q9BSJ5-3|MTNAP1	ENSG00000141219|ENST00000535032|C17orf80	ENSG00000141219|ENST00000535032|C17orf80	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	567.277303	1132.54005	0.81561	0.00046268	-3.1304	-0.0017758	-2.3148	-0.0013131	567.2755710593801	73.039	0.4403	73.593	73.314	73.754	0.55386	0.009045	-0.0012196	NaN	49.536	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	351750			7583	4483	5300	5306							-0.020914724902013404
EPPAKGLL	8	Unmodified	_EPPAKGLL_					0	0	0		ENST00000464829.5_1_9:33469994-33473843:-|nuORF;nc|ENSG00000165271|Q9H6R4-3|NOL6;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6;ENSG00000165271|ENST00000297990|NOL6	ENST00000464829.5_1_9:33469994-33473843:-|nuORF	ENST00000464829.5_1_9:33469994-33473843:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.1945495605469	2	412.747453	823.480354	-1.7687	-0.00073003	3.0382	0.001254	1.2695	0.00052399	412.74708170322384	83.959	0.56577	84.098	83.656	84.222	0.13811					16	12	2	0	0	0	0.4196	1	8057	8057		20.482	7.5226	1	32759			7584	6065	5301	5307	8759	8759					0.06155301357091503
EPPAYIWGI	9	Unmodified	_EPPAYIWGI_					0	0	0		ENST00000427737.5_1_2:220142699-220142855:-|nuORF	ENST00000427737.5_1_2:220142699-220142855:-|nuORF	ENST00000427737.5_1_2:220142699-220142855:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.770751953125	2	523.271293	1044.52803	-0.0086692	-4.5364E-06	-3.2019	-0.0016755	-3.2106	-0.00168	523.2695463937893	69.782	0.61782	69.818	69.495	70.113	0.035622					43	30	2	0	0	0	0.20789	1	6688	6688		29.15	10.825	1	1242100			7585	11582	5302	5308	8760	8760					0.007549555572722966
EPPCCLCPL	9	Unmodified	_EPPCCLCPL_					0	0	0			REV__ENST00000601575.5_1_19:39575751-39589112:+|nuORF	REV__ENST00000601575.5_1_19:39575751-39589112:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7107238769531	2	487.710842	973.407131	1.2508	0.00061004	-0.56851	-0.00027727	0.68232	0.00033277	487.7104095474133	27.518	1.031	27.264	26.945	27.976	-0.25465					45	23	3	0	0	0	0.49378	1	1628	1628		52.299	11.727	1	747210	+		7586	29321	5303	5309	8761	8761					-0.08063654743716597
EPPDSSTQS	9	Unmodified	_EPPDSSTQS_					0	0	0			REV__ENST00000583085.1_1_17:61782266-61782482:-|nuORF	REV__ENST00000583085.1_1_17:61782266-61782482:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.7574462890625	2	474.201261	946.38797	-0.040003	-1.8969E-05	1.6625	0.00078834	1.6225	0.00076937	474.2018848251439	96.62	0.75333	97.024	96.624	97.377	0.40451					31	17	3	0	0	0	0.20789	1	11577	11577		32.812	6.1195	1	548110	+		7587	29064	5304	5310	8762	8762					-0.08736873237751297
EPPESQLH	8	Unmodified	_EPPESQLH_					0	0	0			REV__ENSG00000164151|ENST00000296564|ICE1	REV__ENSG00000164151|ENST00000296564|ICE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.7230224609375	2	468.724707	935.43486	-1.001	-0.0004692	-2.092	-0.00098057	-3.093	-0.0014498	468.7237111234843	78.023	1.0772	78.15	77.878	78.955	0.12695					84	33	4	0	0	0	0.89043	1	7349	7349		35.618	7.364	1	786850	+		7588	21039	5305	5311	8763	8763					-0.03543968895951366
EPPESQLH	8	Unmodified	_EPPESQLH_					0	0	0			REV__ENSG00000164151|ENST00000296564|ICE1	REV__ENSG00000164151|ENST00000296564|ICE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.7231750488281	2	468.724707	935.43486	-1.3692	-0.00064178	-1.4353	-0.00067274	-2.8045	-0.0013145	468.72390435574425	78.099	1.043	78.193	77.873	78.916	0.0942					75	34	3	0	0	0	0.87479	1	7306	7306		30.504	2.6214	1	698450	+		7589	21039	5305	5311	8764	8764					-0.03543968895951366
EPPEVQSFRE	10	Unmodified	_EPPEVQSFRE_					0	0	0		ENSG00000113645|ENST00000265293|WWC1;nc|ENSG00000113645|Q8IX03-2|WWC1;ENST00000518204.1_1_5:167894814-167896019:+|nuORF	ENSG00000113645|ENST00000265293|WWC1	ENSG00000113645|ENST00000265293|WWC1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.7882690429688	2	609.293485	1216.57242	-1.1043	-0.00067285	-3.81	-0.0023214	-4.9143	-0.0029942	609.2910966420866	37.204	0.48429	37.204	36.911	37.395	0					15	10	2	0	0	0	0.37624	1	2214	2214		29.17	0	1	76542			7590	2736	5306	5312	8765	8765					-0.02720685087183483
EPPFDFDPV	9	Unmodified	_EPPFDFDPV_					0	0	0			REV__nc|ENSG00000087460|Q5JWF2-2|GNAS;REV__ENST00000480975.5_1_20:57464272-57485881:+|nuORF	REV__nc|ENSG00000087460|Q5JWF2-2|GNAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.7422485351562	2	531.742565	1061.47058	0.13356	7.1019E-05	-0.58167	-0.0003093	-0.44812	-0.00023828	531.7420984508216	41.722	0.56395	41.677	41.397	41.96	-0.045467					23	13	2	0	0	0	0.76764	1	2741	2741		34.173	0.25091	1	305390	+		7591	29717;27366	5307	5313	8766	8766					-0.057699314389537903
EPPGEMSY	8	Unmodified	_EPPGEMSY_					0	0	0			REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.188232421875	2	455.186568	908.358584	0.65959	0.00030024	3.5209	0.0016026	4.1805	0.0019029	455.1880843326598	25.182	1.1689	25.145	24.668	25.837	-0.037178					47	31	3	0	0	0	0.87922	1	983	983		31.955	3.7006	1	59550	+		7592	21420	5308	5314	8767	8767					-0.09926108787590238
EPPGEMSY	8	Unmodified	_EPPGEMSY_					0	0	0			REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.1881408691406	2	455.186568	908.358584	0.61308	0.00027907	3.6809	0.0016755	4.294	0.0019546	455.18808099033294	28.088	1.2376	28.065	27.313	28.55	-0.023556					55	29	3	0	0	0	0.87922	1	1325	1325		31.955	11.473	1	113930	+		7593	21420	5308	5314	8768	8768					-0.09926108787590238
EPPGEMSY	8	Unmodified	_EPPGEMSY_					0	0	0			REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	455.186568	908.358584	-2.0908	-0.0009517	5.9761	0.0027202	3.8853	0.0017685	455.18906941406476	25.082	0.52806	25.082	24.828	25.356	0	-0.012457	0.0015285	NaN	31.955	27	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24329	+		7594	21420	5308	5314							-0.09926108787590238
EPPGEMSY	8	Unmodified	_EPPGEMSY_					0	0	0			REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	455.186568	908.358584	-1.3001	-0.00059178	5.5012	0.0025041	4.2012	0.0019123	455.1892930633177	25.13	0.46997	25.193	24.864	25.334	0.063122	0.098594	0.0010962	NaN	31.955	33	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41704	+		7595	21420	5308	5314							-0.09926108787590238
EPPGEMSY	8	Unmodified	_EPPGEMSY_					0	0	0			REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	455.186568	908.358584	0.075894	3.4546E-05	4.1637	0.0018953	4.2396	0.0019298	455.1888110131583	24.972	0.26402	25.073	25.005	25.269	0.10045	-0.022348	-0.00012143	NaN	31.955	13	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35150	+		7596	21420	5308	5314							-0.09926108787590238
EPPGEMSY	8	Unmodified	_EPPGEMSY_					0	0	0			REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	455.186568	908.358584	0.48475	0.00022065	4.0677	0.0018516	4.5525	0.0020722	455.18822315047794	24.918	0.45138	24.932	24.645	25.096	0.013996	-0.16281	-0.00020881	NaN	31.955	26	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36489	+		7597	21420	5308	5314							-0.09926108787590238
EPPHAEAGLG	10	Unmodified	_EPPHAEAGLG_					0	0	0		nc|ENSG00000177398|Q5DID0-3|UMODL1;ENSG00000177398|ENST00000408910|UMODL1;nc|ENSG00000177398|Q5DID0-4|UMODL1;nc|ENSG00000177398|Q5DID0-2|UMODL1;ENST00000400423.6_1_21:43540943-43557727:+|nuORF	nc|ENSG00000177398|Q5DID0-3|UMODL1	nc|ENSG00000177398|Q5DID0-3|UMODL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.2369384765625	2	489.237981	976.461409	-0.1238	-6.0567E-05	-2.5221	-0.0012339	-2.6459	-0.0012945	489.2366149761762	63.867	1.3199	63.833	63.53	64.85	-0.034256					75	37	3	0	0	0	0.8608	1	6103	6103		34.173	2.2177	1	621870			7598	7137	5309	5315	8769	8769					-0.02776280004616183
EPPHAEAGLG	10	Unmodified	_EPPHAEAGLG_					0	0	0		nc|ENSG00000177398|Q5DID0-3|UMODL1;ENSG00000177398|ENST00000408910|UMODL1;nc|ENSG00000177398|Q5DID0-4|UMODL1;nc|ENSG00000177398|Q5DID0-2|UMODL1;ENST00000400423.6_1_21:43540943-43557727:+|nuORF	nc|ENSG00000177398|Q5DID0-3|UMODL1	nc|ENSG00000177398|Q5DID0-3|UMODL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.2369689941406	2	489.237981	976.461409	-0.72549	-0.00035494	-2.4583	-0.0012027	-3.1838	-0.0015576	489.23682827265793	62.903	2.2218	63.017	62.721	64.943	0.11388					298	98	5	0	0	0	0.86763	1	5480	5480		26.693	1.2427	1	3506900			7599	7137	5309	5315	8770	8770					-0.02776280004616183
EPPKDEESF	9	Unmodified	_EPPKDEESF_					0	0	0		chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A;chr19:17618962-17624829|52|21.02|0.18|6.91|-|ENST00000552293|UNC13A,UNC13A;ENSG00000130477|ENST00000519716|UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.242919921875	2	539.240386	1076.46622	-0.18037	-9.7262E-05	3.7893	0.0020433	3.6089	0.0019461	539.2422804629531	62.076	0.71587	62.066	61.697	62.413	-0.0094147					58	29	3	0	0	0	0.35373	1	5764	5764		60.972	9.6365	1	516380			7600	266	5310	5316	8771	8771					-0.06895440652510842
EPPKDEESF	9	Unmodified	_EPPKDEESF_					0	0	0		chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A;chr19:17618962-17624829|52|21.02|0.18|6.91|-|ENST00000552293|UNC13A,UNC13A;ENSG00000130477|ENST00000519716|UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.2427978515625	2	539.240386	1076.46622	0.82613	0.00044549	2.6717	0.0014407	3.4979	0.0018862	539.2416577167436	61.906	0.75049	61.873	61.511	62.261	-0.033169					56	28	3	0	0	0	0.44421	1	5844	5844		54.776	1.8396	1	574740			7601	266	5310	5316	8772	8772					-0.06895440652510842
EPPKDEESF	9	Unmodified	_EPPKDEESF_					0	0	0		chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A;chr19:17618962-17624829|52|21.02|0.18|6.91|-|ENST00000552293|UNC13A,UNC13A;ENSG00000130477|ENST00000519716|UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.2437133789062	2	539.240386	1076.46622	0.48952	0.00026397	3.07	0.0016554	3.5595	0.0019194	539.2418908615597	61.858	0.64476	61.978	61.607	62.252	0.11957					47	27	2	0	0	0	0.41566	1	5372	5372		56.721	5.3856	1	434680			7602	266	5310	5316	8773	8773					-0.06895440652510842
EPPKDEESF	9	Unmodified	_EPPKDEESF_					0	0	0		chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A;chr19:17618962-17624829|52|21.02|0.18|6.91|-|ENST00000552293|UNC13A,UNC13A;ENSG00000130477|ENST00000519716|UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	539.2424926757812	2	539.240386	1076.46622	-0.56157	-0.00030282	4.2631	0.0022989	3.7016	0.001996	539.2426054566623	61.977	0.63985	61.993	61.594	62.234	0.015724					36	24	2	0	0	0	0.6204	1	5390	5390		45.972	0.020292	1	430660			7603	266	5310	5316	8774	8774					-0.06895440652510842
EPPKLPRSRK	10	Unmodified	_EPPKLPRSRK_					0	0	0		nc|ENSG00000080839|P28749-2|RBL1;ENSG00000080839|ENST00000373664|RBL1	nc|ENSG00000080839|P28749-2|RBL1	nc|ENSG00000080839|P28749-2|RBL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.24688720703125	3	403.247173	1206.71969	-0.18602	-7.5014E-05	-0.48244	-0.00019454	-0.66847	-0.00026956	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.86272	1	11261	11261		17.833	0	1	12308000			7604	1453	5311	5317	8775	8775					0.12459876308253115
EPPLVRVNRK	10	Unmodified	_EPPLVRVNRK_					0	0	0		nc|ENSG00000153029|Q95460-2|MR1;ENSG00000153029|ENST00000367580|MR1	nc|ENSG00000153029|Q95460-2|MR1	nc|ENSG00000153029|Q95460-2|MR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3662109375	2	604.367121	1206.71969	-1.2751	-0.0007706	0.20453	0.00012361	-1.0705	-0.00064699	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.86218	1	11313	11313		32.812	7.2384	1	103250000			7605	5210	5312	5318	8776	8776					0.12459876308253115
EPPPGQTPI	9	Unmodified	_EPPPGQTPI_					0	0	0			REV__ENST00000502506.6_1_19:19626824-19626920:+|nuORF	REV__ENST00000502506.6_1_19:19626824-19626920:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2450866699219	2	468.245275	934.475997	0.1062	4.9729E-05	-0.063897	-2.992E-05	0.042305	1.9809E-05	468.2450979766261	47.531	1.8726	47.521	47.036	48.909	-0.0093269					110	52	3	0	0	0	0.31972	1	3882	3882		63.306	3.0123	1	1766700	+		7606	27821	5313	5319	8777	8777					0.006137921435083626
EPPPPFQT	8	Unmodified	_EPPPPFQT_					0	0	0		ENSG00000174574|ENST00000432648|AKIRIN1;nc|ENSG00000174574|Q9H9L7-2|AKIRIN1	ENSG00000174574|ENST00000432648|AKIRIN1	ENSG00000174574|ENST00000432648|AKIRIN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.25439453125	2	456.726718	911.438883	-0.97999	-0.00044759	-3.6429	-0.0016638	-4.6228	-0.0021114	456.72491348526285	31.968	0.51401	32.094	31.775	32.289	0.12643					18	11	2	0	0	0	0.4196	1	2167	2167		14.865	0	1	94042			7607	6947	5314	5320	8778	8778					-0.02037879402234921
EPPPQSPAL	9	Unmodified	_EPPPQSPAL_					0	0	0		ENST00000308302.3_1_1:204167444-204167576:-|nuORF	ENST00000308302.3_1_1:204167444-204167576:-|nuORF	ENST00000308302.3_1_1:204167444-204167576:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2450256347656	2	468.245275	934.475997	0.29201	0.00013673	-0.21451	-0.00010045	0.0775	3.6289E-05	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.31972	2	3569	3502;3569		63.306	0.32785	1	7645500			7608	9885	5315	5321	8779;8780	8780					0.006137921435083626
EPPPVAAAPS	10	Unmodified	_EPPPVAAAPS_					0	0	0			REV__nc|ENSG00000127603|O94854|MACF1	REV__nc|ENSG00000127603|O94854|MACF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2428283691406	2	468.245275	934.475997	0.1062	4.9729E-05	-0.063897	-2.992E-05	0.042305	1.9809E-05	468.2450979766261	47.531	1.8726	47.521	47.036	48.909	-0.0093269					110	52	3	0	0	0	0.46422	2	3933	3933;3958		58.782	8.8512	1	1766700	+		7609	29829	5316	5322	8781;8782	8781					0.006137921435083626
EPPPVAAAPS	10	Unmodified	_EPPPVAAAPS_					0	0	0			REV__nc|ENSG00000127603|O94854|MACF1	REV__nc|ENSG00000127603|O94854|MACF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.24322509765625	2	468.245275	934.475997	-0.76235	-0.00035697	0.76559	0.00035848	0.0032383	1.5163E-06	468.24549296496195	47.46	2.028	47.434	46.94	48.968	-0.026737					112	56	3	0	0	0	0.8608	1	4037	4037		34.173	3.6689	1	1887700	+		7610	29829	5316	5322	8783	8783					0.006137921435083626
EPPPVAAAPS	10	Unmodified	_EPPPVAAAPS_					0	0	0			REV__nc|ENSG00000127603|O94854|MACF1	REV__nc|ENSG00000127603|O94854|MACF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2445068359375	2	468.245275	934.475997	0.29201	0.00013673	-0.21451	-0.00010045	0.0775	3.6289E-05	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.53935	1	3652	3652		53.351	3.3269	1	7645500	+		7611	29829	5316	5322	8784	8784					0.006137921435083626
EPPSEPLFV	9	Unmodified	_EPPSEPLFV_					0	0	0			REV__nc|ENSG00000067057|Q01813-2|PFKP	REV__nc|ENSG00000067057|Q01813-2|PFKP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80133056640625	2	507.760758	1013.50696	0.35806	0.00018181	-3.6989	-0.0018781	-3.3408	-0.0016963	508.25873411968956	50.579	0.38758	50.629	50.487	50.874	0.049896					18	12	2	0	0	0	0.20789	1	3968	3968		31.955	0	1	42961	+		7612	16533	5317	5323	8785	8785					0.0007494545775443839
EPPSKGTT	8	Unmodified	_EPPSKGTT_					0	0	0		nc|ENSG00000127124|Q5T1R4-2|HIVEP3;ENSG00000127124|ENST00000372583|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.26177978515625	2	408.708525	815.402498	-2.1641	-0.00088449	4.2785	0.0017487	2.1144	0.00086417	408.7102581941664	16.488	0.18197	16.488	16.415	16.597	0					11	8	2	0	0	0	0.4196	1	121	121		16.473	0	1	40383			7613	3484	5318	5324	8786	8786					-0.01258756298955177
EPPSPHSLVS	10	Unmodified	_EPPSPHSLVS_					0	0	0			REV__nc|ENSG00000269220|Q8N1L1|LINC00528	REV__nc|ENSG00000269220|Q8N1L1|LINC00528	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.3231811523438	2	525.266739	1048.51892	-0.27759	-0.00014581	1.7475	0.00091791	1.4699	0.0007721	525.2667496025163	31.154	0.70165	31.234	30.856	31.558	0.079836					33	15	3	0	0	0	0.37624	1	2092	2092		13.454	3.1888	1	125360	+		7614	30260	5319	5325	8787	8787					-0.00339437799038933
EPPSPHSLVS	10	Unmodified	_EPPSPHSLVS_					0	0	0			REV__nc|ENSG00000269220|Q8N1L1|LINC00528	REV__nc|ENSG00000269220|Q8N1L1|LINC00528	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	525.266739	1048.51892	0.43464	0.0002283	-0.3592	-0.00018868	0.075437	3.9625E-05	525.2665426565205	31.124	0.52001	31.128	30.84	31.36	0.0037212	-0.05318	-0.00044814	NaN	13.454	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164750	+		7615	30260	5319	5325							-0.00339437799038933
EPPSYSSG	8	Unmodified	_EPPSYSSG_					0	0	0		nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-4|NUP214;ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-5|NUP214	nc|ENSG00000126883|P35658-2|NUP214	nc|ENSG00000126883|P35658-2|NUP214	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.17584228515625	2	412.177058	822.339563	-0.18655	-7.6891E-05	-3.0083	-0.00124	-3.1949	-0.0013168	412.17579267785936	95.368	1.8182	95.435	94.838	96.656	0.066727					99	42	3	0	0	0	0.89457	1	9960	9960		37.028	1.8278	1	1871100			7616	3477	5320	5326	8788	8788					-0.0787132208698722
EPPTEHLL	8	Unmodified	_EPPTEHLL_					0	0	0			REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2452392578125	2	468.245275	934.475997	-0.76235	-0.00035697	0.76559	0.00035848	0.0032383	1.5163E-06	468.24549296496195	47.46	2.028	47.434	46.94	48.968	-0.026737					112	56	3	0	0	0	0.84634	3	3942	3929;3942;3979		60.294	10.269	1	1887700	+		7617	19969	5321	5327	8789;8790;8791	8790					0.006137921435311
EPPTEHLL	8	Unmodified	_EPPTEHLL_					0	0	0			REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.24505615234375	2	468.245275	934.475997	-0.58318	-0.00027307	0.68145	0.00031909	0.098267	4.6013E-05	468.24540363646156	47.508	2.0762	47.505	46.933	49.01	-0.002449					126	59	4	0	0	0	0.60155	4	3898	3888;3898;3907;3931		71.378	15.874	1	1948700	+		7618	19969	5321	5327	8792;8793;8794;8795	8793					0.006137921435311
EPPTEHLL	8	Unmodified	_EPPTEHLL_					0	0	0			REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.2448425292969	2	468.245275	934.475997	-1.0647	-0.00049855	0.99639	0.00046656	-0.06832	-3.199E-05	468.2456241225619	47.383	3.6723	47.402	45.915	49.587	0.018967					223	102	4	0	0	0	0.35733	4	3546	3535;3546;3558;3583		96.048	21.531	1	7165000	+		7619	19969	5321	5327	8796;8797;8798;8799	8797					0.006137921435311
EPPTEHLL	8	Unmodified	_EPPTEHLL_					0	0	0			REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.24505615234375	2	468.245275	934.475997	0.29201	0.00013673	-0.21451	-0.00010045	0.0775	3.6289E-05	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.60155	5	3538	3510;3538;3549;3559;3613		71.378	11.084	1	7645500	+		7620	19969	5321	5327	8800;8801;8802;8803;8804	8801					0.006137921435311
EPPTEHLL	8	Unmodified	_EPPTEHLL_					0	0	0			REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.2456359863281	2	468.245275	934.475997	-0.27928	-0.00013077	0.30581	0.00014319	0.026523	1.2419E-05	468.2452890208871	47.437	2.6016	47.349	46.711	49.313	-0.08765					186	72	4	0	0	0	0.60155	4	3559	3513;3522;3559;3625		71.378	5.5063	1	6668700	+		7621	19969	5321	5327	8805;8806;8807;8808	8807					0.006137921435311
EPPTLCHML	9	Oxidation (M)	_EPPTLCHM(Oxidation (M))L_		EPPTLCHM(1)L		EPPTLCHM(56)L	0	0	1			REV__ENST00000552301.1_1_12:49962159-49962315:+|nuORF	REV__ENST00000552301.1_1_12:49962159-49962315:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.748291015625	2	528.74627	1055.47799	-0.095755	-5.063E-05	3.8537	0.0020376	3.758	0.001987	528.7481699737567	87.707	1.9212	87.908	87.371	89.292	0.20114					108	45	3	0	0	0	0.43338	1	8677	8677		55.504	6.2934	1	733950	+		7622	28621	5322	5328	8809	8809		424			-0.04753238434545892
EPPTLLHE	8	Unmodified	_EPPTLLHE_					0	0	0			REV__ENSG00000215045|ENST00000457091|GRID2IP	REV__ENSG00000215045|ENST00000457091|GRID2IP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2445068359375	2	468.245275	934.475997	0.1062	4.9729E-05	-0.063897	-2.992E-05	0.042305	1.9809E-05	468.2450979766261	47.531	1.8726	47.521	47.036	48.909	-0.0093269					110	52	3	0	0	0	0.67263	3	3924	3863;3897;3924		68.485	16.186	1	1766700	+		7623	23675	5323	5329	8810;8811;8812	8812					0.006137921435197313
EPPTLLHE	8	Unmodified	_EPPTLLHE_					0	0	0			REV__ENSG00000215045|ENST00000457091|GRID2IP	REV__ENSG00000215045|ENST00000457091|GRID2IP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2439880371094	2	468.245275	934.475997	-0.76235	-0.00035697	0.76559	0.00035848	0.0032383	1.5163E-06	468.24549296496195	47.46	2.028	47.434	46.94	48.968	-0.026737					112	56	3	0	0	0	0.92973	1	4014	4014		50.025	7.5501	1	1887700	+		7624	23675	5323	5329	8813	8813					0.006137921435197313
EPPTLLHE	8	Unmodified	_EPPTLLHE_					0	0	0			REV__ENSG00000215045|ENST00000457091|GRID2IP	REV__ENSG00000215045|ENST00000457091|GRID2IP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2445373535156	2	468.245275	934.475997	-0.58318	-0.00027307	0.68145	0.00031909	0.098267	4.6013E-05	468.24540363646156	47.508	2.0762	47.505	46.933	49.01	-0.002449					126	59	4	0	0	0	0.89962	2	3859	3859;3915		52.299	9.8247	1	1948700	+		7625	23675	5323	5329	8814;8815	8814					0.006137921435197313
EPPTLLHE	8	Unmodified	_EPPTLLHE_					0	0	0			REV__ENSG00000215045|ENST00000457091|GRID2IP	REV__ENSG00000215045|ENST00000457091|GRID2IP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.2451477050781	2	468.245275	934.475997	-1.0647	-0.00049855	0.99639	0.00046656	-0.06832	-3.199E-05	468.2456241225619	47.383	3.6723	47.402	45.915	49.587	0.018967					223	102	4	0	0	0	0.60155	6	3518	3508;3518;3576;3619;3627;3638		71.378	21.353	1	7165000	+		7626	23675	5323	5329	8816;8817;8818;8819;8820;8821	8817					0.006137921435197313
EPPTLLHE	8	Unmodified	_EPPTLLHE_					0	0	0			REV__ENSG00000215045|ENST00000457091|GRID2IP	REV__ENSG00000215045|ENST00000457091|GRID2IP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2452697753906	2	468.245275	934.475997	0.29201	0.00013673	-0.21451	-0.00010045	0.0775	3.6289E-05	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.79972	2	3604	3604;3622		62.978	12.954	1	7645500	+		7627	23675	5323	5329	8822;8823	8822					0.006137921435197313
EPPTLLHE	8	Unmodified	_EPPTLLHE_					0	0	0			REV__ENSG00000215045|ENST00000457091|GRID2IP	REV__ENSG00000215045|ENST00000457091|GRID2IP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.24530029296875	2	468.245275	934.475997	-0.27928	-0.00013077	0.30581	0.00014319	0.026523	1.2419E-05	468.2452890208871	47.437	2.6016	47.349	46.711	49.313	-0.08765					186	72	4	0	0	0	0.60155	6	3530	3502;3530;3585;3602;3648;3659		71.378	19.079	1	6668700	+		7628	23675	5323	5329	8824;8825;8826;8827;8828;8829	8825					0.006137921435197313
EPPVLLASII	10	Unmodified	_EPPVLLASII_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3242797851562	2	526.323525	1050.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.972	1	61.988	61.488	62.488	0.015724								0	0	0	0.45132	1	5396	5396		27.882	3.6795	1		+		7629	16877	5324	5330	8830	8830					0.10920657313999982
EPPVSTLLL	9	Unmodified	_EPPVSTLLL_					0	0	0			REV__ENST00000371753.5_1_9:138901598-138901784:-|nuORF	REV__ENST00000371753.5_1_9:138901598-138901784:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2865295410156	2	484.786776	967.558998	-0.82892	-0.00040185	2.3043	0.0011171	1.4754	0.00071523	484.7879467591206	41.542	1.8895	41.546	40.825	42.714	0.0043983					125	56	4	0	0	0	0.20789	1	2770	2770		21.96	6.3181	1	909420	+		7630	25698	5325	5331	8831	8831					0.07392108871545133
EPPYKDFYSHD	11	Unmodified	_EPPYKDFYSHD_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.5392150878906	3	466.538458	1396.59355	-0.20705	-9.6597E-05	1.2698	0.0005924	1.0627	0.0004958	466.53930586029725	30.685	1.4681	30.689	30.316	31.784	0.0037212					100	33	6	0	0	0	0.51578	1	2029	2029		50.791	16.705	1	11503000	+		7631	19491	5326	5332	8832	8832					-0.08888719778337872
EPPYTHGQP	9	Unmodified	_EPPYTHGQP_					0	0	0			REV__ENST00000275732.5_1_7:100278784-100278913:-|nuORF	REV__ENST00000275732.5_1_7:100278784-100278913:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.2356567382812	2	513.237981	1024.46141	0.021127	1.0843E-05	-0.67335	-0.00034559	-0.65222	-0.00033475	513.2373683965097	53.265	0.70753	53.262	52.936	53.644	-0.0033035					27	18	2	0	0	0	0.72402	1	4642	4642		38.806	3.1879	1	75983	+		7632	24573	5327	5333	8833	8833					-0.049842800046235425
EPQCPPARSQP	11	Unmodified	_EPQCPPARSQP_					0	0	0		ENST00000260247.9_1_11:102962591-102962891:-|nuORF	ENST00000260247.9_1_11:102962591-102962891:-|nuORF	ENST00000260247.9_1_11:102962591-102962891:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.2857055664062	2	605.287679	1208.56081	0.98247	0.00059468	-3.4293	-0.0020757	-2.4469	-0.0014811	605.2852052046003	58.208	1.6782	58.295	57.834	59.512	0.087002					167	73	3	0	0	0	0.36401	1	4967	4967		37.508	0	1	1590000			7633	9383	5328	5334	8834	8834					-0.03513205382182605
EPQCPPARSQP	11	Unmodified	_EPQCPPARSQP_					0	0	0		ENST00000260247.9_1_11:102962591-102962891:-|nuORF	ENST00000260247.9_1_11:102962591-102962891:-|nuORF	ENST00000260247.9_1_11:102962591-102962891:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.2855224609375	2	605.287679	1208.56081	-0.21892	-0.00013251	-2.7244	-0.001649	-2.9433	-0.0017815	605.285887959875	58.271	1.5426	58.263	57.785	59.328	-0.0074387					123	65	2	0	0	0	0.383	1	4935	4935		29.551	0	1	1563500			7634	9383	5328	5334	8835	8835					-0.03513205382182605
EPQELLQRLR	10	Unmodified	_EPQELLQRLR_					0	0	0			REV__ENSG00000152818|ENST00000367545|UTRN	REV__ENSG00000152818|ENST00000367545|UTRN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3619995117188	2	641.367318	1280.72008	2.7098	0.001738	-1.6531	-0.0010603	1.0567	0.00067772	641.8686496633335	113.82	0.16916	113.79	113.65	113.82	-0.024452					6	5	2	0	0	0	0.37624	1	12601	12601		32.812	1.2826	1	19503	+		7635	20318	5329	5335	8836	8836					0.0909525123745425
EPQGLLSCGSG	11	Unmodified	_EPQGLLSCGSG_					0	0	0		ENSG00000161850|ENST00000257974|KRT82;CON__Q9NSB4	ENSG00000161850|ENST00000257974|KRT82	ENSG00000161850|ENST00000257974|KRT82	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.6349487304688	2	524.242406	1046.47026	-0.49119	-0.0002575	-3.4177	-0.0017917	-3.9089	-0.0020492	524.24044506946	45.248	0.5657	45.217	44.929	45.495	-0.031067					28	12	3	0	0	0	0.14954	1	3652	3652		67.494	3.2864	1	208350		+	7636	641	5330	5336	8837	8837					-0.05111674430440871
EPQGLLSCGSG	11	Unmodified	_EPQGLLSCGSG_					0	0	0		ENSG00000161850|ENST00000257974|KRT82;CON__Q9NSB4	ENSG00000161850|ENST00000257974|KRT82	ENSG00000161850|ENST00000257974|KRT82	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.634765625	2	524.242406	1046.47026	0.03904	2.0466E-05	-4.016	-0.0021053	-3.9769	-0.0020849	524.2402856475386	45.245	0.60867	45.24	44.925	45.534	-0.0041618					24	13	3	0	0	0	0.16822	1	3585	3585		62.107	12.666	1	173690		+	7637	641	5330	5336	8838	8838					-0.05111674430440871
EPQLAPGAPRR	11	Unmodified	_EPQLAPGAPRR_					0	0	0			REV__ENST00000305135.9_1_3:183415678-183432942:+|nuORF	REV__ENST00000305135.9_1_3:183415678-183432942:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.3328857421875	2	596.333279	1190.652	0.92114	0.00054931	-1.5725	-0.00093773	-0.65136	-0.00038843	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.70737	1	9922	9922		30.318	1.1682	1	1402200	+		7638	24815	5331	5337	8839	8839					0.06430426377460208
EPQLSGKML	9	Oxidation (M)	_EPQLSGKM(Oxidation (M))L_		EPQLSGKM(1)L		EPQLSGKM(48)L	0	0	1		ENSG00000085999|ENST00000371975|RAD54L	ENSG00000085999|ENST00000371975|RAD54L	ENSG00000085999|ENST00000371975|RAD54L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7679138183594	2	509.765517	1017.51648	1.7251	0.00087938	2.3891	0.0012179	4.1142	0.0020973	509.76657945713333	99.907	0.82828	100.24	99.852	100.68	0.33295					41	20	3	0	0	0	0.58668	1	12092	12092		47.657	8.4045	1	442870			7639	1549	5332	5338	8840	8840		33			0.008423904716551078
EPRAARRALGL	11	Unmodified	_EPRAARRALGL_					0	0	0			REV__ENST00000537992.5_1_7:20371057-20406686:+|nuORF	REV__ENST00000537992.5_1_7:20371057-20406686:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9101257324219	3	403.910672	1208.71019	1.6372	0.00066129	-2.878	-0.0011624	-1.2408	-0.00050115	403.90940390905183	68.69	2.5103	69.075	67.299	69.809	0.38482					145	63	3	0	0	0	0.71207	1	7444	7444		29.551	2.801	1	351280	+		7640	28429	5333	5339	8841	8841					0.11418108022735396
EPRFRQLSY	9	Unmodified	_EPRFRQLSY_					0	0	0			REV__ENSG00000153902|ENST00000310123|LGI4	REV__ENSG00000153902|ENST00000310123|LGI4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3167114257812	2	598.314554	1194.61456	-0.55853	-0.00033418	3.7588	0.0022489	3.2003	0.0019148	598.3164468285976	70.139	0.50546	70.169	70.036	70.542	0.030495					54	25	3	0	0	0	0.77546	1	6655	6655		31.955	1.4512	1	757770	+		7641	20361	5334	5340	8842	8842					0.025033351118509017
EPRGDRLGLMF	11	Unmodified	_EPRGDRLGLMF_					0	0	0			REV__CON__Q6T181;REV__nc|ENSG00000129214|P04278-4|SHBG	REV__CON__Q6T181	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	646.8079223632812	2	645.834797	1289.65504	-1.0594	-0.00068417	-4.4896	-0.0028996	-5.549	-0.0035837	645.8312024929403	57.389	0.12222	57.783	57.697	57.819	0.39407					4	2	2	0	0	0	0.17245	1	5966	5966		37.812	11.119	1	89716	+	+	7642	16023;18811	5335	5341	8843	8843					0.0217993343994749
EPRIMMSMRA	10	Unmodified	_EPRIMMSMRA_					0	0	0			REV__ENSG00000101350|ENST00000375712|KIF3B	REV__ENSG00000101350|ENST00000375712|KIF3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.7398681640625	3	407.868211	1220.5828	1.5395	0.00062789	-1.8567	-0.00075729	-0.31724	-0.00012939	407.8671696245385	35.537	0.3788	35.785	35.554	35.933	0.24769					11	9	2	0	0	0	0.37624	1	2744	2744		25.126	4.811	1	47422	+		7643	17271	5336	5342	8844	8844					-0.018664402296053595
EPRKIILHK	9	Unmodified	_EPRKIILHK_					0	0	0		nc|ENSG00000082458|Q92796-2|DLG3;ENSG00000082458|ENST00000374360|DLG3	nc|ENSG00000082458|Q92796-2|DLG3	nc|ENSG00000082458|Q92796-2|DLG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3630981445312	2	567.361308	1132.70806	0.39672	0.00022508	3.6187	0.0020531	4.0154	0.0022782	567.363221347754	44.24	2.8558	44.249	42.808	45.664	0.0084534					165	70	4	0	0	0	0.7932	1	3170	3170		16.473	0	1	1167000			7644	1485	5337	5343	8845	8845					0.14701679284939928
EPRKLLTQD	9	Unmodified	_EPRKLLTQD_					0	0	0		ENSG00000147381|ENST00000276344|MAGEA4;chrX:151918356-151923453|23|121.91|0.29|8.73|+|ENST00000360243|MAGEA4,MAGEA4;chrX:151917681-151923453|23|114.61|0.27|8.75|+|ENST00000370335|MAGEA4,MAGEA4;chrX:151917002-151923453|26|252.58|0.36|9.45|+|ENST00000457310|MAGEA4,MAGEA4;chrX:151915637-151923453|23|105.0|0.24|8.75|+|ENST00000370340|MAGEA4,MAGEA4;chrX:151914276-151923453|27|285.22|0.34|9.72|+|ENST00000430273|MAGEA4,MAGEA4;ENSG00000267978|ENST00000595065|MAGEA9B;ENSG00000123584|ENST00000243314|MAGEA9;ENSG00000124260|ENST00000370323|MAGEA10;ENSG00000198681|ENST00000356661|MAGEA1	ENSG00000147381|ENST00000276344|MAGEA4;ENSG00000198681|ENST00000356661|MAGEA1	ENSG00000198681|ENST00000356661|MAGEA1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3065185546875	2	550.308938	1098.60332	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.589	1	57.668	57.168	58.168	0.079643								0	0	0	0.28889	1	4877	4877		35.152	0	1				7645	545;8305	5338	5344	8846	8846					0.05796513017708094
EPRKQAGSLA	10	Unmodified	_EPRKQAGSLA_					0	0	0		ENST00000496181.1_1_6:167435938-167438429:+|nuORF;nc|ENSG00000272980|O95684-3|CEP43;ENST00000609590.1_1_6:167417751-167458021:+|nuORF;nc|ENSG00000272980|O95684-2|CEP43;ENSG00000213066|ENST00000366847|CEP43	ENST00000496181.1_1_6:167435938-167438429:+|nuORF	ENST00000496181.1_1_6:167435938-167438429:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.7930908203125	2	528.793455	1055.57236	-1.5408	-0.00081478	1.4151	0.0007483	-0.12571	-6.6474E-05	528.7940819687291	36.232	0.98741	36.232	35.879	36.867	0					58	23	4	0	0	0	0.42897	1	2092	2092		61.691	5.059	1	756220			7646	8577	5339	5345	8847	8847					0.04679359703482078
EPRKQAGSLA	10	Unmodified	_EPRKQAGSLA_					0	0	0		ENST00000496181.1_1_6:167435938-167438429:+|nuORF;nc|ENSG00000272980|O95684-3|CEP43;ENST00000609590.1_1_6:167417751-167458021:+|nuORF;nc|ENSG00000272980|O95684-2|CEP43;ENSG00000213066|ENST00000366847|CEP43	ENST00000496181.1_1_6:167435938-167438429:+|nuORF	ENST00000496181.1_1_6:167435938-167438429:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.7925415039062	2	528.793455	1055.57236	-0.29217	-0.0001545	0.15811	8.361E-05	-0.13405	-7.0887E-05	528.7934265407783	36.279	1.2558	36.223	35.879	37.135	-0.055904					72	27	4	0	0	0	0.60985	1	2442	2442		49.536	8.7579	1	1444600			7647	8577	5339	5345	8848	8848					0.04679359703482078
EPRLDALFV	9	Unmodified	_EPRLDALFV_					0	0	0			REV__ENSG00000169105|ENST00000306243|CHST14	REV__ENSG00000169105|ENST00000306243|CHST14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.293212890625	2	530.295299	1058.57605	-0.73575	-0.00039016	-2.8196	-0.0014952	-3.5553	-0.0018854	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.77546	1	9033	9033		31.955	5.2619	1	1390700	+		7648	21549	5340	5346	8849	8849					0.04910029477309763
EPRNRLGP	8	Unmodified	_EPRNRLGP_					0	0	0			REV__ENST00000545954.5_1_17:41622701-41623614:-|nuORF	REV__ENST00000545954.5_1_17:41622701-41623614:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7601623535156	2	469.761958	937.509363	-1.0554	-0.00049577	-1.9277	-0.00090556	-2.9831	-0.0014013	469.7608617085479	40.328	1.2889	40.334	40.071	41.36	0.0065002					73	45	3	0	0	0	0.90465	1	2549	2549		40.573	4.1259	1	435990	+		7649	28533	5341	5347	8850	8850					0.03810838706078812
EPRPKERKKRL	11	Unmodified	_EPRPKERKKRL_					0	0	0			REV__nc|ENSG00000105339|A2RUS2-2|DENND3	REV__nc|ENSG00000105339|A2RUS2-2|DENND3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3127136230469	3	479.631798	1435.87356	-0.64532	-0.00030951	2.6592	0.0012754	2.0139	0.00096591	479.6327456519026	19.64	1.5407	19.01	18.62	20.161	-0.6296					70	33	3	0	0	0	0.17784	1	636	636		22.562	10.629	1	180800	+		7650	17527	5342	5348	8851	8851					0.17306286073767296
EPRPPNWQ	8	Unmodified	_EPRPPNWQ_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2542724609375	2	512.253966	1022.49338	-0.40094	-0.00020538	0.087759	4.4955E-05	-0.31318	-0.00016043	512.253883322564	54.419	1.295	54.474	54.011	55.305	0.055614					87	42	3	0	0	0	0.92973	1	4482	4482		50.025	0	1	718970	+		7651	16216	5343	5349	8852	8852					-0.01696867530813506
EPRPRAGG	8	Unmodified	_EPRPRAGG_					0	0	0			REV__ENST00000275364.7_1_7:2883623-2883950:-|nuORF	REV__ENST00000275364.7_1_7:2883623-2883950:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2274169921875	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.91005	1	7303	7303		42.474	14.22	1	419890	+		7652	24572	5344	5350	8853	8853					0.015265941262327942
EPRRELQLEL	10	Unmodified	_EPRRELQLEL_					0	0	0			REV__nc|ENSG00000173706|Q9ULI3-2|HEG1	REV__nc|ENSG00000173706|Q9ULI3-2|HEG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3626098632812	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.86218	1	13056	13056		32.812	1.2826	1	27133000	+		7653	21946	5345	5351	8854	8854					0.07451545000549231
EPRRGPGL	8	Unmodified	_EPRRGPGL_					0	0	0		ENST00000451091.2_1_1:40041668-40042359:-|nuORF	ENST00000451091.2_1_1:40041668-40042359:-|nuORF	ENST00000451091.2_1_1:40041668-40042359:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.24884033203125	2	441.251226	880.487899	-0.96478	-0.00042571	-1.1899	-0.00052503	-2.1546	-0.00095074	441.2505832318685	48.855	0.55903	49.315	49.064	49.623	0.45983					28	13	3	0	0	0	0.9295	1	4735	4735		55.504	7.5886	1	1035400			7654	11898	5346	5352	8855	8855					0.04287453677386566
EPRRRLEIVFV	11	Unmodified	_EPRRRLEIVFV_					0	0	0		ENSG00000167693|ENST00000336868|NXN	ENSG00000167693|ENST00000336868|NXN	ENSG00000167693|ENST00000336868|NXN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.9514465332031	3	471.949016	1412.82522	1.8696	0.00088238	3.7398	0.001765	5.6094	0.0026474	471.95079991838713	105.05	0.63052	105.21	104.93	105.56	0.15583					36	16	3	0	0	0	0.75121	1	12793	12793		21.78	1.75	1	234370			7655	6317	5347	5353	8856	8856					0.13531792433855117
EPRSIFEETL	10	Unmodified	_EPRSIFEETL_					0	0	0			REV__ENSG00000268235|ENST00000622971|TCP11X1	REV__ENSG00000268235|ENST00000622971|TCP11X1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	610.810546875	2	610.81151	1219.60847	0.8917	0.00054466	-0.98146	-0.00059949	-0.089756	-5.4824E-05	610.8107257743561	51.459	0.66323	52.127	51.813	52.477	0.66729					50	15	5	0	0	0	0.18075	1	5138	5138		90.601	1.572	1	2458000	+		7656	23673	5348	5354	8857	8857					0.007447720896834653
EPRTFAVYLN	10	Unmodified	_EPRTFAVYLN_					0	0	0		ENSG00000137573|ENST00000402687|SULF1;ENST00000526808.5_1_8:70476378-70496789:+|nuORF;ENST00000531064.5_1_8:70476378-70501346:+|nuORF	ENSG00000137573|ENST00000402687|SULF1	ENSG00000137573|ENST00000402687|SULF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	606.174072265625	2	605.316763	1208.61897	-0.80118	-0.00048497	0.16562	0.00010025	-0.63557	-0.00038472	605.3169032808852	47.524	0.783	48.447	48.081	48.864	0.92315					42	19	3	0	0	0	0.37624	1	4597	4597		23.523	0	1	665980			7657	4214	5349	5355	8858	8858					0.023007995347597898
EPRVGLGIG	9	Unmodified	_EPRVGLGIG_					0	0	0		nc|ENSG00000133401|O15018-2|PDZD2;ENSG00000133401|ENST00000438447|PDZD2;ENST00000502489.5_1_5:31983264-32077762:+|nuORF	nc|ENSG00000133401|O15018-2|PDZD2	nc|ENSG00000133401|O15018-2|PDZD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2606201171875	2	449.261259	896.507966	-0.10987	-4.936E-05	-1.2586	-0.00056544	-1.3685	-0.0006148	449.26053823357574	68.09	1.1232	68.638	68.16	69.283	0.54819					61	26	4	0	0	0	0.7932	1	7540	7540		25.45	1.2474	1	1909000			7658	3876	5350	5356	8859	8859					0.05557204617332445
EPSCIPGV	8	Unmodified	_EPSCIPGV_					0	0	0			REV__L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|76|3|sense	REV__L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|76|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1964416503906	2	401.194196	800.37384	0.95889	0.0003847	-3.8871	-0.0015595	-2.9282	-0.0011748	401.1922959275617	82.183	0.64466	82.609	82.313	82.958	0.42645					20	15	2	0	0	0	0.4196	1	9476	9476		26.796	0	1	111760	+		7659	29502	5351	5357	8860	8860					-0.03433197199740334
EPSDVLLR	8	Unmodified	_EPSDVLLR_					0	0	0			REV__ENST00000443945.6_1_13:47127426-47279607:+|nuORF	REV__ENST00000443945.6_1_13:47127426-47279607:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2677307128906	2	464.758549	927.502546	-1.2369	-0.00057487	-4.4006	-0.0020452	-5.6375	-0.0026201	464.7562048221874	80.383	0.13914	80.383	80.283	80.422	0					9	6	2	0	0	0	0.4196	1	7415	7415		24.203	0	1	32713	+		7660	26779	5352	5358	8861	8861					0.035894810348509054
EPSFITESY	9	Unmodified	_EPSFITESY_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7451782226562	2	536.745305	1071.47606	-0.022154	-1.1891E-05	1.0576	0.00056764	1.0354	0.00055575	536.7457602764791	69.352	1.9441	69.736	69.139	71.084	0.38416					125	50	5	0	0	0	1.1882E-08	4	7620	7611;7620;7631;7643		162.31	80.001	1	4632900			7661	3973	5353	5359	8862;8863;8864;8865	8863					-0.05682252647147834
EPSFITESY	9	Unmodified	_EPSFITESY_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7450561523438	2	536.745305	1071.47606	-0.65994	-0.00035422	1.4462	0.00077623	0.78624	0.00042201	536.7459714608132	69.256	1.875	69.803	69.324	71.199	0.54694					117	48	5	0	0	0	3.2505E-30	3	7646	7633;7646;7657		193.98	92.348	1	5310600			7662	3973	5353	5359	8866;8867;8868	8867					-0.05682252647147834
EPSHTLSSA	9	Unmodified	_EPSHTLSSA_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7231140136719	2	464.722164	927.429775	-0.33703	-0.00015663	1.9521	0.00090717	1.615	0.00075055	464.72291150494004	16.53	0.24507	16.45	16.327	16.572	-0.080017					15	9	2	0	0	0	0.22631	1	123	123		71.296	7.9894	1	121370	+		7663	21648	5354	5360	8869	8869					-0.036842727585622015
EPSHTLSSA	9	Unmodified	_EPSHTLSSA_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	464.722164	927.429775	-2.1079	-0.00097961	3.6489	0.0016957	1.5409	0.0007161	464.72381305019087	16.447	0.13726	16.447	16.375	16.513	0	0.069485	0.0017418	NaN	71.296	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46100	+		7664	21648	5354	5360							-0.036842727585622015
EPSHTLSSA	9	Unmodified	_EPSHTLSSA_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	464.722164	927.429775	-0.33703	-0.00015663	1.9521	0.00090717	1.615	0.00075055	464.72291150494004	16.53	0.24507	16.45	16.327	16.572	-0.080017	0.072264	0.00016474	NaN	71.296	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121370	+		7665	21648	5354	5360							-0.036842727585622015
EPSHTLSSA	9	Unmodified	_EPSHTLSSA_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	464.722164	927.429775	0.21877	0.00010167	1.4576	0.0006774	1.6764	0.00077907	464.72264942353803	16.463	0.20946	16.38	16.291	16.501	-0.083363	0.0021227	-0.00029481	NaN	71.296	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92568	+		7666	21648	5354	5360							-0.036842727585622015
EPSHTLSSA	9	Unmodified	_EPSHTLSSA_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	464.722164	927.429775	-1.1678	-0.0005427	3.0118	0.0013997	1.844	0.00085696	464.72354792731375	16.381	0.1331	16.429	16.351	16.484	0.047804	0.05112	0.0011497	NaN	71.296	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109130	+		7667	21648	5354	5360							-0.036842727585622015
EPSHTLSSA	9	Unmodified	_EPSHTLSSA_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	464.722164	927.429775	0.046889	2.1791E-05	2.5264	0.0011741	2.5733	0.0011959	464.72338724081925	16.394	0.21046	16.453	16.321	16.531	0.059269	0.075338	0.00069852	NaN	71.296	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118210	+		7668	21648	5354	5360							-0.036842727585622015
EPSHTLSSA	9	Unmodified	_EPSHTLSSA_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	464.722164	927.429775	0.6553	0.00030453	1.1747	0.00054591	1.83	0.00085044	464.7227612683456	16.446	0.16131	16.422	16.337	16.499	-0.024035	0.044385	-0.0005578	NaN	71.296	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127060	+		7669	21648	5354	5360							-0.036842727585622015
EPSHTLSSA	9	Unmodified	_EPSHTLSSA_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	464.722164	927.429775	0.12855	5.9739E-05	1.4931	0.00069389	1.6217	0.00075363	464.7227735519963	16.794	0.3091	16.306	16.143	16.452	-0.48718	-0.071296	-0.00026182	NaN	71.296	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150210	+		7670	21648	5354	5360							-0.036842727585622015
EPSHTLSSA	9	Unmodified	_EPSHTLSSA_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	464.722164	927.429775	0.082581	3.8377E-05	1.5807	0.00073461	1.6633	0.00077299	464.7227472880342	16.778	0.38019	16.167	16.048	16.429	-0.6107	-0.2107	-0.00018039	NaN	71.296	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191900	+		7671	21648	5354	5360							-0.036842727585622015
EPSLHKPM	8	Unmodified	_EPSLHKPM_					0	0	0		ENSG00000171561|ENST00000641541|OR2AT4	ENSG00000171561|ENST00000641541|OR2AT4	ENSG00000171561|ENST00000641541|OR2AT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.7436218261719	2	469.741845	937.469137	0.66937	0.00031443	1.8393	0.00086402	2.5087	0.0011785	469.7424385076299	23.738	0.55278	23.164	22.92	23.472	-0.57415					30	12	4	0	0	0	0.91005	1	1079	1079		42.474	0	1	314830			7672	6683	5355	5361	8870	8870					-0.0020984400869110686
EPSQAVSV	8	Unmodified	_EPSQAVSV_					0	0	0		ENSG00000128052|ENST00000263923|KDR;nc|ENSG00000128052|P35968-2|KDR;nc|ENSG00000128052|P35968-3|KDR	ENSG00000128052|ENST00000263923|KDR	ENSG00000128052|ENST00000263923|KDR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.7095642089844	2	408.708525	815.402498	0.91171	0.00037262	1.4223	0.00058131	2.334	0.00095393	408.70896408653806	16.33	0.269	16.408	16.296	16.565	0.077959					21	11	3	0	0	0	0.87064	1	91	91		29.15	0	1	80196			7673	3529	5356	5362	8871	8871					-0.012587562989438084
EPSSSLYPPF	10	Unmodified	_EPSSSLYPPF_					0	0	0			REV__ENSG00000136960|ENST00000075322|ENPP2	REV__ENSG00000136960|ENST00000075322|ENPP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.3052368164062	2	562.268947	1122.52334	0.012289	6.9099E-06	3.7877	0.0021297	3.8	0.0021366	562.2711616377176	84.076	0.77133	84.512	84.088	84.859	0.43538					25	18	2	0	0	0	0.37624	1	9770	9770		45.952	5.1738	1	105710	+		7674	19353	5357	5363	8872	8872					-0.033019733761420866
EPTAAALAY	9	Unmodified	_EPTAAALAY_					0	0	0		ENST00000507097.5_1_5:137893182-137909502:-|nuORF;ENSG00000113013|ENST00000297185|HSPA9;ENST00000432228.1_1_2:222826463-222827672:+|nuORF	ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENST00000507097.5_1_5:137893182-137909502:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7320861816406	2	453.732	905.449448	-0.25805	-0.00011709	0.71198	0.00032305	0.45393	0.00020596	453.73217599550503	54.692	1.132	55.261	54.651	55.783	0.56836					63	26	3	0	0	0	0.39977	1	5578	5578		57.811	0	1	1968900			7675	2694	5358	5364	8873	8873					-0.007058967478201339
EPTAAALAY	9	Unmodified	_EPTAAALAY_					0	0	0		ENST00000507097.5_1_5:137893182-137909502:-|nuORF;ENSG00000113013|ENST00000297185|HSPA9;ENST00000432228.1_1_2:222826463-222827672:+|nuORF	ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENST00000507097.5_1_5:137893182-137909502:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	453.732	905.449448	-0.34078	-0.00015462	0.72159	0.00032741	0.38082	0.00017279	453.73219176557615	54.873	1.4654	55.28	54.573	56.038	0.40663	0.0095745	4.4484E-06	NaN	57.811	68	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1702500			7676	2694	5358	5364							-0.007058967478201339
EPTIESFSY	9	Unmodified	_EPTIESFSY_					0	0	0			REV__ENST00000480956.1_1_7:32527269-32527392:-|nuORF	REV__ENST00000480956.1_1_7:32527269-32527392:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.74560546875	2	536.745305	1071.47606	-0.022154	-1.1891E-05	1.0576	0.00056764	1.0354	0.00055575	536.7457602764791	69.352	1.9441	69.736	69.139	71.084	0.38416					125	50	5	0	0	0	0.64922	1	7666	7666		44.117	6.3053	1	4632900	+		7677	27190	5359	5365	8874	8874					-0.05682252647125097
EPTLDELDQ	9	Unmodified	_EPTLDELDQ_					0	0	0		ENSG00000106245|ENST00000222969|BUD31;ENST00000473447.1_1_7:99008715-99008814:+|nuORF;ENST00000471813.1_1_7:99008715-99013888:+|nuORF;nc|ENSG00000106245|P41223-2|BUD31	ENSG00000106245|ENST00000222969|BUD31	ENSG00000106245|ENST00000222969|BUD31	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.8192749023438	2	530.245669	1058.47678	1.0016	0.0005311	0.53708	0.00028479	1.5387	0.00081588	530.245683951136	28.31	0.74239	28.137	27.846	28.588	-0.17336					33	18	3	0	0	0	0.20789	1	1714	1714		32.812	7.2384	1	244220			7678	2285	5360	5366	8875	8875					-0.050114579980800045
EPTNKYII	8	Unmodified	_EPTNKYII_					0	0	0			REV__ENSG00000147592|ENST00000276590|LACTB2	REV__ENSG00000147592|ENST00000276590|LACTB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.7696533203125	2	489.26875	976.522947	-3.0941	-0.0015138	0.53349	0.00026102	-2.5606	-0.0012528	489.26883558760886	40.692	0.67071	40.698	40.36	41.031	0.0065727					27	17	2	0	0	0	0.67263	1	2944	2944		68.485	7.5128	1	273170	+		7679	20077	5361	5367	8876	8876					0.03374651694673503
EPTNPNYADLE	11	Unmodified	_EPTNPNYADLE_					0	0	0			REV__ENSG00000184985|ENST00000507866|SORCS2	REV__ENSG00000184985|ENST00000507866|SORCS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.5201721191406	3	421.522697	1261.54626	0.093054	3.9225E-05	-4.4182	-0.0018624	-4.3252	-0.0018232	421.52066126627744	31.324	0.69064	31.343	31.081	31.771	0.01836					31	15	3	0	0	0	0.70847	1	1676	1676		30.139	0.58839	1	91565	+		7680	22720	5362	5368	8877	8877					-0.07404999049322214
EPTNPNYADLE	11	Unmodified	_EPTNPNYADLE_					0	0	0			REV__ENSG00000184985|ENST00000507866|SORCS2	REV__ENSG00000184985|ENST00000507866|SORCS2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	421.522697	1261.54626	0.093054	3.9225E-05	-4.4182	-0.0018624	-4.3252	-0.0018232	421.52066126627744	31.324	0.69064	31.343	31.081	31.771	0.01836	-0.033779	0.00098879	NaN	30.139	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91565	+		7681	22720	5362	5368							-0.07404999049322214
EPTPAPQDN	9	Unmodified	_EPTPAPQDN_					0	0	0		ENSG00000260314|ENST00000569591|MRC1	ENSG00000260314|ENST00000569591|MRC1	ENSG00000260314|ENST00000569591|MRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7176818847656	2	484.719621	967.42469	-1.6647	-0.00080692	-1.0387	-0.00050347	-2.7034	-0.0013104	484.718975245025	98.748	4.2341	98.941	95.671	99.905	0.1928					171	98	2	0	0	0	0.77244	1	10192	10192		32.812	1.2826	1	437580			7682	8918	5363	5369	8878	8878					-0.06032576621191765
EPTPAPQDN	9	Unmodified	_EPTPAPQDN_					0	0	0		ENSG00000260314|ENST00000569591|MRC1	ENSG00000260314|ENST00000569591|MRC1	ENSG00000260314|ENST00000569591|MRC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71759033203125	2	484.719621	967.42469	1.0671	0.00051723	-3.9124	-0.0018964	-2.8453	-0.0013792	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.76764	1	11839	11839		34.173	1.3601	1	7522200			7683	8918	5363	5369	8879	8879					-0.06032576621191765
EPTSSGLLV	9	Unmodified	_EPTSSGLLV_					0	0	0			REV__nc|ENSG00000169282|Q14722-2|KCNAB1	REV__nc|ENSG00000169282|Q14722-2|KCNAB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7445983886719	2	451.745108	901.475663	-0.092061	-4.1588E-05	1.7939	0.00081036	1.7018	0.00076878	451.7457658869967	34.705	0.79864	34.701	34.334	35.132	-0.0047417					49	20	3	0	0	0	0.58151	1	2084	2084		47.916	1.9636	1	211490	+		7684	21566	5364	5370	8880	8880					0.02098372423699857
EPTTVVVPP	9	Unmodified	_EPTTVVVPP_					0	0	0		ENST00000317269.7_1_12:56222369-56222408:-|nuORF	ENST00000317269.7_1_12:56222369-56222408:-|nuORF	ENST00000317269.7_1_12:56222369-56222408:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.7605285644531	2	469.7633	937.512048	0.18565	8.7212E-05	-3.8401	-0.0018039	-3.6544	-0.0017167	469.76127734615494	35.397	1.4141	35.503	35.2	36.614	0.10604					71	45	2	0	0	0	0.76996	2	1875	1875;1910		33.516	3.0119	1	151100			7685	9992	5365	5371	8881;8882	8881					0.0407924932038668
EPVAFKERIQ	10	Unmodified	_EPVAFKERIQ_					0	0	0			REV__nc|ENSG00000140829|Q92620-2|DHX38	REV__nc|ENSG00000140829|Q92620-2|DHX38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.837890625	2	608.837862	1215.66117	0.09385	5.714E-05	-1.5088	-0.00091863	-1.415	-0.00086149	608.836828431824	110.46	1.0631	110.5	110.23	111.29	0.031738					103	33	4	0	0	0	0.85251	1	12165	12165		19.997	3.5236	1	3714300	+		7686	19643	5366	5372	8883	8883					0.061967749431460106
EPVAIITI	8	Unmodified	_EPVAIITI_					0	0	0			REV__ENST00000319264.3_1_9:12775658-12775754:+|nuORF	REV__ENST00000319264.3_1_9:12775658-12775754:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.26153564453125	2	428.262936	854.51132	1.4286	0.0006118	-4.4022	-0.0018853	-2.9736	-0.0012735	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.87922	1	9726	9726		31.955	2.1133	1	57042000	+		7687	24984	5367	5373	8884	8884					0.0782445467133357
EPVAPKSS	8	Unmodified	_EPVAPKSS_					0	0	0		ENST00000482916.1_1_16:12996763-13002341:+|nuORF	ENST00000482916.1_1_16:12996763-13002341:+|nuORF	ENST00000482916.1_1_16:12996763-13002341:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.7207336425781	2	407.718893	813.423233	2.6827	0.0010938	1.362	0.00055532	4.0447	0.0016491	407.7196256873708	102.15	0.80925	102.41	102.07	102.88	0.26322					65	19	4	0	0	0	0.86288	1	12397	12397		26.796	1.3459	1	5496600			7688	12496	5368	5374	8885	8885					0.009058340807200693
EPVATHCV	8	Unmodified	_EPVATHCV_					0	0	0			REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.261474609375	2	428.205096	854.395638	-1.85	-0.00079216	0.10338	4.4269E-05	-1.7466	-0.00074789	428.2046368843075	90.691	0.397	90.871	90.72	91.117	0.18029					15	9	3	0	0	0	0.4196	1	9045	9045		42.474	5.446	1	76687	+		7689	18583	5369	5375	8886	8886					-0.037383924511800615
EPVKSKRYHRE	11	Unmodified	_EPVKSKRYHRE_					0	0	0			REV__ENST00000464178.1_1_1:38148756-38155336:-|nuORF	REV__ENST00000464178.1_1_1:38148756-38155336:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.9256896972656	3	476.928392	1427.76335	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.884	1	32.883	32.383	33.383	-0.0016365								0	0	0	0.56276	1	1899	1899		25.892	5.8612	1		+		7690	27088	5370	5376	8887	8887					0.06657441014749566
EPVLCLFSN	9	Unmodified	_EPVLCLFSN_					0	0	0			REV__ENSG00000158863|ENST00000289921|FHIP2B	REV__ENSG00000158863|ENST00000289921|FHIP2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.27496337890625	2	511.254785	1020.49502	1.0573	0.00054056	-3.9532	-0.0020211	-2.8959	-0.0014806	511.2524298487433	57.231	1.168	57.786	57.181	58.349	0.55513					68	28	4	0	0	0	0.20789	1	5884	5884		14.137	0	1	1300100	+		7691	20626	5371	5377	8888	8888					-0.014409945570605487
EPVPLRKLYAP	11	Unmodified	_EPVPLRKLYAP_					0	0	0			REV__ENSG00000145354|ENST00000273986|CISD2	REV__ENSG00000145354|ENST00000273986|CISD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.882568359375	2	641.87953	1281.74451	0.91411	0.00058675	3.6201	0.0023236	4.5342	0.0029104	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.61369	1	9982	9982		42.864	2.8061	1	4136300	+		7692	19941	5372	5378	8889	8889					0.11490511391002656
EPVRGLRN	8	Unmodified	_EPVRGLRN_					0	0	0			REV__nc|ENSG00000138395|Q96Q40-4|CDK15	REV__nc|ENSG00000138395|Q96Q40-4|CDK15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7695007324219	2	470.769783	939.525013	-0.38802	-0.00018267	-0.92797	-0.00043686	-1.316	-0.00061953	470.76920559370467	50.764	1.147	50.672	50.317	51.464	-0.091797					76	32	3	0	0	0	0.87479	1	4060	4060		30.504	0.6621	1	1480000	+		7693	19469	5373	5379	8890	8890					0.052831252231385406
EPVRKFTGKAV	11	Unmodified	_EPVRKFTGKAV_					0	0	0		ENST00000549114.5_1_16:779204-779453:+|nuORF;ENSG00000103253|ENST00000389703|HAGHL	ENST00000549114.5_1_16:779204-779453:+|nuORF	ENST00000549114.5_1_16:779204-779453:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	411.2432861328125	3	411.243429	1230.70846	3.1796	0.0013076	-2.7212	-0.0011191	0.45837	0.0001885	411.242176396756	102.96	0.40462	103.01	102.75	103.15	0.043198					16	9	2	0	0	0	0.71207	1	11152	11152		29.551	4.4248	1	631510			7694	2069	5374	5380	8891	8891					0.10233054214131698
EPVTIPDKPN	10	Unmodified	_EPVTIPDKPN_					0	0	0		ENSG00000143318|ENST00000368078|CASQ1	ENSG00000143318|ENST00000368078|CASQ1	ENSG00000143318|ENST00000368078|CASQ1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.28466796875	2	555.295496	1108.57644	-0.76758	-0.00042623	0.13654	7.5819E-05	-0.63104	-0.00035041	555.2952883931245	45.99	0.40024	46.461	46.214	46.614	0.47139					18	9	3	0	0	0	0.37624	1	4273	4273		36.447	0	1	265360			7695	4616	5375	5381	8892	8892					0.026494044065202615
EPVVIQLL	8	Unmodified	_EPVVIQLL_					0	0	0			REV__ENST00000375859.3_1_9:91093137-91093245:+|nuORF	REV__ENST00000375859.3_1_9:91093137-91093245:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	455.7846984863281	2	455.784036	909.553519	-1.8164	-0.00082788	3.166	0.001443	1.3496	0.00061515	455.785318563311	43.535	2.2148	43.535	42.918	45.133	0					85	53	2	0	0	0	0.85277	1	3100	3100		25.45	0	1	247130	+		7696	25826	5376	5382	8893	8893					0.09512430079723799
EPVVIQLL	8	Unmodified	_EPVVIQLL_					0	0	0			REV__ENST00000375859.3_1_9:91093137-91093245:+|nuORF	REV__ENST00000375859.3_1_9:91093137-91093245:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3011169433594	2	455.784036	909.553519	-0.037635	-1.7153E-05	2.2613	0.0010306	2.2236	0.0010135	455.7857235126031	34.191	0.12241	34.401	34.319	34.441	0.21003					4	2	2	0	0	0	0.4196	1	2521	2521		31.955	0	1	35487	+		7697	25826	5376	5382	8894	8894					0.09512430079723799
EPVVIQLL	8	Unmodified	_EPVVIQLL_					0	0	0			REV__ENST00000375859.3_1_9:91093137-91093245:+|nuORF	REV__ENST00000375859.3_1_9:91093137-91093245:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.7842712402344	2	455.784036	909.553519	-1.7491	-0.00079722	3.2958	0.0015022	1.5467	0.00070496	455.78533618800145	42.014	1.5481	42.712	42.124	43.672	0.69754					60	38	2	0	0	0	0.91005	1	3719	3719		42.474	8.9589	1	3887800	+		7698	25826	5376	5382	8895	8895					0.09512430079723799
EPVVLGTII	9	Unmodified	_EPVVLGTII_					0	0	0		ENST00000506793.5_1_4:44680541-44700695:+|nuORF;ENSG00000151806|ENST00000281543|GUF1	ENST00000506793.5_1_4:44680541-44700695:+|nuORF	ENST00000506793.5_1_4:44680541-44700695:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7896728515625	2	470.789318	939.564084	-1.7868	-0.00084119	3.031	0.001427	1.2443	0.00058579	470.7906139736521	40.476	1.2312	40.476	39.584	40.815	0					64	34	2	0	0	0	0.7932	1	2574	2574		17.365	0	1	120330			7699	5144	5377	5383	8896	8896					0.09188412734170015
EPVWELQAW	9	Unmodified	_EPVWELQAW_					0	0	0			REV__ENSG00000119535|ENST00000373106|CSF3R	REV__ENSG00000119535|ENST00000373106|CSF3R	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.8484497070312	2	579.284931	1156.55531	-1.5528	-0.0008995	-2.9619	-0.0017158	-4.5147	-0.0026153	579.2832387893528	44.329	0.28505	44.779	44.608	44.893	0.45025					10	6	2	0	0	0	0.20789	1	4053	4053		14.865	0	1	137770	+		7700	18357	5378	5384	8897	8897					-0.016705609023574652
EPWQPDRHSL	10	Unmodified	_EPWQPDRHSL_					0	0	0			REV__ENST00000301904.3_1_8:27530062-27530341:+|nuORF	REV__ENST00000301904.3_1_8:27530062-27530341:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2056884765625	3	422.207155	1263.59963	1.0497	0.00044317	-4.0776	-0.0017216	-3.028	-0.0012784	422.2053729810952	28.4	0.60957	28.227	27.979	28.588	-0.17336					34	15	3	0	0	0	0.86549	1	1721	1721		29.551	0.38069	1	188300	+		7701	24773	5379	5385	8898	8898					-0.021621567561624033
EPWTPTIKRIL	11	Unmodified	_EPWTPTIKRIL_					0	0	0			REV__ENST00000324366.12_2_14:23396769-23396847:-|nuORF	REV__ENST00000324366.12_2_14:23396769-23396847:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9327392578125	3	451.934484	1352.78162	-0.13819	-6.2454E-05	-3.9218	-0.0017724	-4.06	-0.0018349	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.77205	1	10684	10684		17.167	1.2461	1	924270	+		7702	25047	5380	5386	8899	8899					0.1193418293673858
EPYLKSFY	8	Unmodified	_EPYLKSFY_					0	0	0		nc|ENSG00000103723|Q13367|AP3B2;ENSG00000103723|ENST00000535359|AP3B2;nc|ENSG00000103723|Q13367-3|AP3B2;ENST00000543938.5_1_15:83328314-83349061:-|nuORF;nc|ENSG00000132842|O00203-3|AP3B1;ENSG00000132842|ENST00000255194|AP3B1	nc|ENSG00000103723|Q13367|AP3B2	nc|ENSG00000103723|Q13367|AP3B2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.7612915039062	2	523.7633	1045.51205	-0.042751	-2.2391E-05	-4.2732	-0.0022381	-4.3159	-0.0022605	523.7607727774529	60.587	0.95979	60.575	60.077	61.037	-0.012203					59	22	4	0	0	0	0.91005	1	5621	5621		42.474	4.6629	1	308610			7703	2098	5381	5387	8900	8900					-0.008887506796099842
EPYREEEWWKW	11	Unmodified	_EPYREEEWWKW_					0	0	0			REV__ENSG00000198900|ENST00000361337|TOP1	REV__ENSG00000198900|ENST00000361337|TOP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.5858764648438	3	546.584291	1636.73104	0.4248	0.00023219	1.6628	0.00090887	2.0876	0.0011411	546.5851526157304	23.492	1.0829	23.552	23.24	24.323	0.060431					64	33	3	0	0	0	0.79945	1	798	798		11.455	1.3507	1	44407	+		7704	23408	5382	5388	8901	8901					-0.061853911789512495
EPYREEEWWKW	11	Unmodified	_EPYREEEWWKW_					0	0	0			REV__ENSG00000198900|ENST00000361337|TOP1	REV__ENSG00000198900|ENST00000361337|TOP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.9187622070312	3	546.584291	1636.73104	1.2419	0.00067879	0.36222	0.00019799	1.6041	0.00087678	546.5842195086688	23.856	1.2474	23.282	22.792	24.039	-0.57415					68	28	3	0	0	0	0.85873	1	1104	1104		5.4129	1.7939	1	207460	+		7705	23408	5382	5388	8902	8902					-0.061853911789512495
EPYREEEWWKW	11	Unmodified	_EPYREEEWWKW_					0	0	0			REV__ENSG00000198900|ENST00000361337|TOP1	REV__ENSG00000198900|ENST00000361337|TOP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	410.7576904296875	4	410.190037	1636.73104	1.3586	0.00055728	0.45847	0.00018806	1.8171	0.00074534	410.19021667191174	23.841	1.0304	23.267	23.009	24.039	-0.57415					53	23	4	0	0	0	0.18372	1	1122	1122		0.3405	0	1	122220	+		7706	23408	5382	5388	8903	8903					-0.061853911789512495
EPYYSWEALDH	11	Unmodified	_EPYYSWEALDH_					0	0	0			REV__ENSG00000170608|ENST00000302177|FOXA3	REV__ENSG00000170608|ENST00000302177|FOXA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.87408447265625	3	470.538458	1408.59355	-0.1043	-4.9076E-05	3.224	0.001517	3.1197	0.001468	470.53972629765406	29.443	0.73071	29.354	29.061	29.792	-0.089544					38	16	3	0	0	0	0.74022	1	1875	1875		24.232	3.1996	1	438330	+		7707	21674	5383	5389	8904	8904					-0.09440719778308448
EQAEIDPHRV	10	Unmodified	_EQAEIDPHRV_					0	0	0			REV__nc|ENSG00000160285|P48449-2|LSS	REV__nc|ENSG00000160285|P48449-2|LSS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8002319335938	2	597.299101	1192.58365	-0.12766	-7.6253E-05	0.21023	0.00012557	0.082563	4.9315E-05	597.2990016489515	72.288	0.55567	72.248	72.009	72.565	-0.04039					37	22	2	0	0	0	0.73395	1	7060	7060		42.864	0	1	149060	+		7708	20709	5384	5390	8905	8905					-0.004938629930620664
EQAIVDVVAN	10	Unmodified	_EQAIVDVVAN_					0	0	0		ENSG00000138279|ENST00000372921|ANXA7;nc|ENSG00000138279|P20073|ANXA7	ENSG00000138279|ENST00000372921|ANXA7	ENSG00000138279|ENST00000372921|ANXA7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7933349609375	2	529.279846	1056.54514	1.0992	0.00058177	-2.1185	-0.0011213	-1.0193	-0.00053949	529.2784499537431	35.815	0.18679	36.062	35.894	36.081	0.24769					5	4	2	0	0	0	0.37624	1	2750	2750		72.879	30.483	1	73008			7709	4285	5385	5391	8906	8906					0.019128313724195323
EQANLWLV	8	Unmodified	_EQANLWLV_					0	0	0		ENSG00000128602|ENST00000249373|SMO	ENSG00000128602|ENST00000249373|SMO	ENSG00000128602|ENST00000249373|SMO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.7903137207031	2	486.761092	971.507631	0.41545	0.00020223	3.3085	0.0016105	3.724	0.0018127	486.7626524988089	33.405	0.46431	33.575	33.356	33.821	0.16971					16	10	2	0	0	0	0.4196	1	2429	2429		20.482	14.169	1	127070			7710	3551	5386	5392	8907	8907					0.020737848974818007
EQDMLEKRKIQ	11	Oxidation (M)	_EQDM(Oxidation (M))LEKRKIQ_		EQDM(1)LEKRKIQ		EQDM(65)LEKRKIQ	0	0	1		nc|ENSG00000162614|Q0ZGT2-4|NEXN;nc|ENSG00000162614|Q0ZGT2-2|NEXN;ENSG00000162614|ENST00000334785|NEXN;nc|ENSG00000162614|Q0ZGT2-3|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.5877380371094	3	478.585414	1432.73441	-0.064351	-3.0797E-05	3.8209	0.0018286	3.7566	0.0017978	478.5874879701833	48.705	1.8625	49.165	48.416	50.278	0.45983					145	45	6	0	0	0	0.33562	1	4681	4681		65.278	11.681	1	22356000			7711	5705	5387	5393	8908	8908		100			0.035355356034187935
EQERLKVAK	9	Unmodified	_EQERLKVAK_					0	0	0			REV__ENSG00000197976|ENST00000313871|AKAP17A	REV__ENSG00000197976|ENST00000313871|AKAP17A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.826904296875	2	550.824755	1099.63496	-0.60357	-0.00033246	0.21956	0.00012094	-0.38401	-0.00021152	550.8247962929767	35.416	0.48347	35.404	35.17	35.654	-0.012203					18	10	2	0	0	0	0.77244	1	2209	2209		32.812	0	1	70075	+		7712	23283	5388	5394	8909	8909					0.0891250577167284
EQESSSWADA	10	Unmodified	_EQESSSWADA_					0	0	0			REV__nc|ENSG00000106772|Q8WUY3-4|PRUNE2	REV__nc|ENSG00000106772|Q8WUY3-4|PRUNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.2244873046875	2	555.222725	1108.4309	-0.85148	-0.00047276	1.7824	0.00098964	0.93095	0.00051688	555.2235183697628	76.842	0.49582	76.891	76.517	77.013	0.049194					31	19	2	0	0	0	0.60985	1	7425	7425		49.536	13.918	1	101980	+		7713	17628	5389	5395	8910	8910					-0.11898103180305952
EQFYDFFRYVE	11	Unmodified	_EQFYDFFRYVE_					0	0	0		ENST00000478152.1_1_2:231655619-231663633:+|nuORF;ENSG00000135932|ENST00000258418|CAB39	ENST00000478152.1_1_2:231655619-231663633:+|nuORF	ENST00000478152.1_1_2:231655619-231663633:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.6848754882812	3	514.901508	1541.6827	0.34751	0.00017894	2.5039	0.0012893	2.8515	0.0014682	514.9026336908732	28.21	0.49972	28.187	28.019	28.519	-0.023556					16	10	2	0	0	0	0.17784	1	1330	1330		22.562	8.4756	1	28763			7714	4073	5390	5396	8911	8911					-0.066478848188126
EQFYDFFRYVE	11	Unmodified	_EQFYDFFRYVE_					0	0	0		ENST00000478152.1_1_2:231655619-231663633:+|nuORF;ENSG00000135932|ENST00000258418|CAB39	ENST00000478152.1_1_2:231655619-231663633:+|nuORF	ENST00000478152.1_1_2:231655619-231663633:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	514.901508	1541.6827	1.0802	0.00055619	0.78473	0.00040406	1.8649	0.00096025	514.9020686387462	28.516	0.34624	28.343	28.122	28.468	-0.17336	0.14177	-0.0022508	NaN	22.562	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60751			7715	4073	5390	5396							-0.066478848188126
EQGNAEPT	8	Unmodified	_EQGNAEPT_					0	0	0			REV__nc|ENSG00000169554|O60315-2|ZEB2	REV__nc|ENSG00000169554|O60315-2|ZEB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.5497741699219	2	423.185414	844.356276	1.0316	0.00043657	-0.24293	-0.0001028	0.7887	0.00033376	423.1851534818504	22.496	0.80265	22.077	21.741	22.544	-0.41879					30	17	3	0	0	0	0.4196	1	921	921		29.15	1.2673	1	103380	+		7716	21585	5391	5397	8912	8912					-0.07212821201051156
EQHILLDCS	9	Unmodified	_EQHILLDCS_					0	0	0		nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7811889648438	2	529.252774	1056.491	0.60292	0.0003191	4.1015	0.0021707	4.7044	0.0024898	529.7573089514186	49.29	0.40247	50.194	49.928	50.331	0.90376					19	9	3	0	0	0	0.20789	1	4813	4813		19.104	4.2386	1	205540			7717	15116	5392	5398	8913	8913					-0.034990840507816756
EQHKDPRVQ	9	Unmodified	_EQHKDPRVQ_					0	0	0		ENST00000515156.2_1_5:68927792-68932223:+|nuORF	ENST00000515156.2_1_5:68927792-68932223:+|nuORF	ENST00000515156.2_1_5:68927792-68932223:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.7396240234375	2	568.793986	1135.57342	-0.38495	-0.00021896	-1.5162	-0.0008624	-1.9011	-0.0010814	568.7945155624749	59.7	0.18706	59.701	59.572	59.759	0.00051117					5	4	2	0	0	0	0.20789	1	5121	5121		32.812	0	1	22733			7718	13076	5393	5399	8914	8914					0.0110557407235774
EQHLRLPPP	9	Unmodified	_EQHLRLPPP_					0	0	0			REV__ENST00000607121.5_1_3:50403293-50405431:+|nuORF	REV__ENST00000607121.5_1_3:50403293-50405431:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.8099365234375	2	543.806365	1085.59818	0.065212	3.5463E-05	-3.7033	-0.0020139	-3.6381	-0.0019784	543.8042653951544	16.453	0.22968	15.855	15.74	15.97	-0.59873					9	4	3	0	0	0	0.62081	1	138	138		45.952	3.4775	1	121320	+		7719	29372	5394	5400	8915	8915					0.05880253945747427
EQIAKRHRL	9	Unmodified	_EQIAKRHRL_					0	0	0		ENST00000393214.2_1_X:73595962-73596157:-|nuORF	ENST00000393214.2_1_X:73595962-73596157:-|nuORF	ENST00000393214.2_1_X:73595962-73596157:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8427734375	2	575.843813	1149.67307	0.80402	0.00046299	-2.4364	-0.001403	-1.6324	-0.00094001	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.78536	1	9398	9398		29.15	1.2673	1	6947200			7720	11041	5395	5401	8916	8916					0.10422436476983421
EQIKRNRY	8	Unmodified	_EQIKRNRY_					0	0	0		nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1;ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1	nc|ENSG00000050405|Q9UHB6-3|LIMA1	nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.807373046875	2	553.806897	1105.59924	-0.015909	-8.8104E-06	2.2855	0.0012657	2.2696	0.0012569	553.8079715323117	33.637	0.88436	33.639	33.266	34.15	0.0026016					55	19	4	0	0	0	0.79403	1	1978	1978		63.306	2.3343	1	360760			7721	994	5396	5402	8917	8917					0.05066468314657868
EQILAPLPLV	10	Unmodified	_EQILAPLPLV_					0	0	0			REV__nc|ENSG00000135899|Q9HB58-5|SP110	REV__nc|ENSG00000135899|Q9HB58-5|SP110	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.840087890625	2	546.8368	1091.65905	3.386	0.0018516	1.8298	0.0010006	5.2158	0.0028522	546.8379771318001	101.02	3.777	100.97	100.36	104.13	-0.052116					284	90	6	0	0	0	0.84112	1	11062	11062		37.159	3.6435	1	39176000	+		7722	19261	5397	5403	8918	8918					0.11688346205323796
EQIPPMVPL	9	Unmodified	_EQIPPMVPL_					0	0	0			REV__ENST00000340648.5_1_21:45114371-45114962:+|nuORF	REV__ENST00000340648.5_1_21:45114371-45114962:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2817993164062	2	512.280803	1022.54705	0.38138	0.00019537	0.68002	0.00034836	1.0614	0.00054374	512.2810762358159	86.258	3.4931	86.314	85.063	88.556	0.055649					143	81	2	0	0	0	0.67345	2	8810	8775;8810		42.396	3.59	1	344420	+		7723	25251	5398	5404	8919;8920	8920					0.03668168856700049
EQIPPMVPL	9	Unmodified	_EQIPPMVPL_					0	0	0			REV__ENST00000340648.5_1_21:45114371-45114962:+|nuORF	REV__ENST00000340648.5_1_21:45114371-45114962:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.282470703125	2	512.280803	1022.54705	-1.5312	-0.00078441	2.5811	0.0013222	1.0498	0.00053782	512.2820384248688	86.195	3.9563	86.353	85.285	89.241	0.15851					164	92	2	0	0	0	0.22631	2	8377	8377;8466		71.296	30.518	1	356130	+		7724	25251	5398	5404	8921;8922	8921					0.03668168856700049
EQIRKGIN	8	Unmodified	_EQIRKGIN_					0	0	0		nc|ENSG00000159086|Q9Y5B6-4|PAXBP1;nc|ENSG00000159086|Q9Y5B6-2|PAXBP1;ENSG00000159086|ENST00000331923|PAXBP1;ENST00000464256.1_1_21:34132086-34144033:-|nuORF;nc|ENSG00000159086|Q9Y5B6-3|PAXBP1	nc|ENSG00000159086|Q9Y5B6-4|PAXBP1	nc|ENSG00000159086|Q9Y5B6-4|PAXBP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2774658203125	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.89494	1	7948	7948		37.159	0	1	4644500			7725	5509	5399	5405	8923	8923					0.060319920203255606
EQIRLAQMI	9	Unmodified	_EQIRLAQMI_					0	0	0		nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	nc|ENSG00000143569|Q14157-4|UBAP2L	nc|ENSG00000143569|Q14157-4|UBAP2L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.3052978515625	2	551.307884	1100.60121	-0.64985	-0.00035827	-2.6158	-0.0014421	-3.2656	-0.0018004	551.3062723835128	64.068	0.78235	64.067	63.719	64.502	-0.00078583					57	26	3	0	0	0	0.73802	1	5943	5943		37.812	1.3648	1	381510			7726	4646	5400	5406	8924	8924					0.05493761008256115
EQITVGSKKAS	11	Unmodified	_EQITVGSKKAS_					0	0	0			REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3184204101562	2	574.319502	1146.62445	2.1223	0.0012189	-2.2138	-0.0012714	-0.091457	-5.2525E-05	574.3181422905453	94.479	4.1031	94.419	93.372	97.475	-0.059204					230	96	5	0	0	0	0.48313	1	10038	10038		53.089	5.1294	1	1734300	+		7727	21829	5401	5407	8925	8925					0.057004783265938386
EQITVGSKKAS	11	Unmodified	_EQITVGSKKAS_					0	0	0			REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3168334960938	2	574.319502	1146.62445	1.0954	0.0006291	-1.1095	-0.00063718	-0.01407	-8.0805E-06	574.3187099892803	94.307	4.5457	94.353	93.159	97.704	0.046173					261	107	4	0	0	0	0.59499	2	10172	10015;10172		45.022	9.8702	1	1593500	+		7728	21829	5401	5407	8926;8927	8927					0.057004783265938386
EQITVGSKKAS	11	Unmodified	_EQITVGSKKAS_					0	0	0			REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3192138671875	2	574.319502	1146.62445	0.81882	0.00047026	-0.83061	-0.00047704	-0.011797	-6.7755E-06	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.69248	1	9649	9649		32.751	2.2469	1	1866200	+		7729	21829	5401	5407	8928	8928					0.057004783265938386
EQITVGSKKAS	11	Unmodified	_EQITVGSKKAS_					0	0	0			REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3192138671875	2	574.319502	1146.62445	-1.3729	-0.0007885	1.3449	0.0007724	-0.028038	-1.6103E-05	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.66009	1	9572	9572		37.508	4.7576	1	1586900	+		7730	21829	5401	5407	8929	8929					0.057004783265938386
EQIWQLDASL	10	Unmodified	_EQIWQLDASL_					0	0	0			REV__nc|ENSG00000035664|Q9UIK4-2|DAPK2	REV__nc|ENSG00000035664|Q9UIK4-2|DAPK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	601.8038940429688	2	601.806228	1201.5979	-1.5627	-0.00094042	-3.5814	-0.0021553	-5.1441	-0.0030958	601.8037737249068	43.775	0.49048	44.549	44.343	44.833	0.77379					26	11	3	0	0	0	0.60985	1	4000	4000		49.536	1.8787	1	609550	+		7731	29682	5402	5408	8930	8930					0.005167894352325675
EQKDQYAF	8	Unmodified	_EQKDQYAF_					0	0	0		ENSG00000186439|ENST00000334268|TRDN	ENSG00000186439|ENST00000334268|TRDN	ENSG00000186439|ENST00000334268|TRDN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3097534179688	2	514.737814	1027.46108	0.14254	7.3369E-05	2.3718	0.0012208	2.5143	0.0012942	514.7376971945531	58.669	0.37934	59.222	59.006	59.385	0.55323					17	8	3	0	0	0	0.4196	1	6174	6174		45.952	5.3793	1	110000			7732	7795	5403	5409	8931	8931					-0.05155699724468832
EQKRKKAS	8	Unmodified	_EQKRKKAS_					0	0	0		ENSG00000282815|ENST00000695840|TEX13C	ENSG00000282815|ENST00000695840|TEX13C	ENSG00000282815|ENST00000695840|TEX13C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79083251953125	2	487.790715	973.566878	0.54992	0.00026825	-0.9209	-0.00044921	-0.37098	-0.00018096	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.88185	1	8229	8229		32.812	2.4947	1	633420			7733	9054	5404	5410	8932	8932					0.07903680911658739
EQKVTVRNS	9	Unmodified	_EQKVTVRNS_					0	0	0			REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.820556640625	2	530.790912	1059.56727	0.78127	0.00041469	4.3248	0.0022956	5.1061	0.0027103	531.2935154810938	82.447	0.26274	82.506	82.383	82.646	0.059166					7	5	2	0	0	0	0.20789	1	8239	8239		36.447	14.487	1	20764	+		7734	29869	5405	5411	8933	8933					0.03987055840843823
EQLAIQRHID	10	Unmodified	_EQLAIQRHID_					0	0	0			REV__ENSG00000147324|ENST00000276282|MFHAS1	REV__ENSG00000147324|ENST00000276282|MFHAS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.354736328125	2	611.830569	1221.64658	-1.2509	-0.00076534	-0.02931	-1.7933E-05	-1.2802	-0.00078327	611.828666794139	93.672	0.21568	93.87	93.697	93.912	0.19827					6	4	2	0	0	0	0.37624	1	9461	9461		37.812	0	1	26346	+		7735	20065	5406	5412	8934	8934					0.044627027949900366
EQLALLNKLSD	11	Unmodified	_EQLALLNKLSD_					0	0	0			REV__ENSG00000147082|ENST00000376042|CCNB3	REV__ENSG00000147082|ENST00000376042|CCNB3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3470458984375	2	622.34826	1242.68197	-0.17246	-0.00010733	-2.1066	-0.001311	-2.2791	-0.0014184	622.3467162320231	96.253	1.81	96.253	95.614	97.424	0					80	41	2	0	0	0	0.69931	1	9593	9593		31.634	0.10446	1	250670	+		7736	20049	5407	5413	8935	8935					0.07033320532150356
EQLAPLEKVRI	11	Unmodified	_EQLAPLEKVRI_					0	0	0		nc|ENSG00000156026|Q8NE86-3|MCU;ENSG00000156026|ENST00000373053|MCU	nc|ENSG00000156026|Q8NE86-3|MCU	nc|ENSG00000156026|Q8NE86-3|MCU	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3974609375	2	648.387719	1294.76089	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.77	1	113.74	113.24	114.24	-0.024529								0	0	0	0.56276	1	12592	12592		2.7184	0	1				7737	5358	5408	5414	8936	8936					0.12529592557075375
EQLEDKIKD	9	Unmodified	_EQLEDKIKD_					0	0	0		nc|ENSG00000100815|Q15643-2|TRIP11;ENSG00000100815|ENST00000267622|TRIP11	nc|ENSG00000100815|Q15643-2|TRIP11	nc|ENSG00000100815|Q15643-2|TRIP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.593505859375	2	559.290411	1116.56627	-0.060928	-3.4076E-05	-0.047323	-2.6468E-05	-0.10825	-6.0544E-05	559.2902950832719	77.079	1.0886	77.647	77.332	78.421	0.56836					71	26	4	0	0	0	0.67345	1	8758	8758		42.396	0	1	4085400			7738	1874	5409	5415	8937	8937					0.012647966812892264
EQLGLARAAS	10	Unmodified	_EQLGLARAAS_					0	0	0		nc|ENSG00000170959|M0R2J8|DCDC1;chr11:30915711-30916870|14|14.5|0.66|4.46|-|ENST00000597505|DCDC1,DCDC1;chr11:30911420-30915511|13|14.38|0.7|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30909116-30911327|13|15.38|0.76|4.34|-|ENST00000597505|DCDC1,DCDC1;chr11:30905164-30906540|21|14.05|0.72|4.28|-|ENST00000597505|DCDC1,DCDC1;chr11:30903683-30904961|18|18.22|0.57|5.0|-|ENST00000597505|DCDC1,DCDC1;chr11:30899642-30900346|23|15.83|0.82|4.27|-|ENST00000597505|DCDC1,DCDC1;chr11:30894384-30899541|18|19.5|0.94|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30892997-30894248|22|18.0|0.9|4.32|-|ENST00000597505|DCDC1,DCDC1;ENSG00000170959|ENST00000684477|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2800598144531	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.76096	1	9209	9209		41.427	4.9799	1	1903500			7739	100	5410	5416	8938	8938					0.03911670812135526
EQLKFLRML	9	Unmodified	_EQLKFLRML_					0	0	0		ENST00000400183.6_1_21:17177512-17181137:+|nuORF	ENST00000400183.6_1_21:17177512-17181137:+|nuORF	ENST00000400183.6_1_21:17177512-17181137:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3436889648438	2	589.341726	1176.6689	0.80964	0.00047716	0.92916	0.00054759	1.7388	0.0010247	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.75725	1	9144	9144		36.447	4.9169	1	6634500			7740	11221	5411	5417	8939	8939					0.08763210939059718
EQLKQTICK	9	Unmodified	_EQLKQTICK_					0	0	0		nc|ENSG00000126775|Q6ZNE5-2|ATG14;ENSG00000126775|ENST00000247178|ATG14	nc|ENSG00000126775|Q6ZNE5-2|ATG14	nc|ENSG00000126775|Q6ZNE5-2|ATG14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2470092773438	2	545.799891	1089.58523	1.0997	0.00060024	-0.54211	-0.00029589	0.55763	0.00030435	545.7995808651458	27.611	0.69365	27.356	27.115	27.809	-0.25465					27	15	2	0	0	0	0.20789	1	1591	1591		19.997	0	1	345560			7741	3467	5412	5418	8940	8940					0.0440205477134441
EQLKSTLTQI	10	Unmodified	_EQLKSTLTQI_					0	0	0			REV__ENST00000470731.5_1_7:2598728-2641152:+|nuORF	REV__ENST00000470731.5_1_7:2598728-2641152:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8306274414062	2	580.829703	1159.64485	-1.9881	-0.0011547	3.2987	0.001916	1.3107	0.00076128	580.8312794976786	59.527	0.91995	59.918	59.525	60.445	0.39077					48	22	3	0	0	0	0.20077	1	6266	6266		85.862	2.2148	1	1069200	+		7742	17592	5413	5419	8941	8941					0.07141648986385007
EQLLAILP	8	Unmodified	_EQLLAILP_					0	0	0		ENSG00000171222|ENST00000305978|SCAND1	ENSG00000171222|ENST00000305978|SCAND1	ENSG00000171222|ENST00000305978|SCAND1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.77728271484375	2	448.776211	895.537869	-1.2107	-0.00054331	4.2721	0.0019172	3.0615	0.0013739	448.7780530522161	71.86	0.93866	71.94	71.575	72.514	0.080025					46	35	2	0	0	0	0.86288	1	6560	6560		26.796	2.5934	1	128990			7743	6648	5414	5420	8942	8942					0.08592143562668753
EQLLYAKKL	9	Unmodified	_EQLLYAKKL_					0	0	0		ENSG00000156398|ENST00000369893|SFXN2;ENST00000602287.5_1_10:104486384-104488287:+|nuORF	ENSG00000156398|ENST00000369893|SFXN2	ENSG00000156398|ENST00000369893|SFXN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.332275390625	2	553.334424	1104.6543	-0.75754	-0.00041917	-2.8743	-0.0015905	-3.6319	-0.0020096	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.75725	2	10246	10209;10246		36.447	6.129	1	4355400			7744	5376	5415	5421	8943;8944	8944					0.10615462062560255
EQLLYFNY	8	Unmodified	_EQLLYFNY_					0	0	0		ENSG00000054219|ENST00000263636|LY75;nc|ENSG00000054219|O60449-3|LY75;nc|ENSG00000054219|O60449-2|LY75	ENSG00000054219|ENST00000263636|LY75	ENSG00000054219|ENST00000263636|LY75	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.2647705078125	2	545.266207	1088.51786	0.11097	6.0506E-05	-4.3183	-0.0023546	-4.2073	-0.0022941	545.2637562071981	52.69	0.76491	52.666	52.327	53.092	-0.023849					28	18	2	0	0	0	0.9295	1	4684	4684		55.504	4.3115	1	191670			7745	1016	5416	5422	8945	8945					-0.022856521679386788
EQLQKTKAN	9	Unmodified	_EQLQKTKAN_					0	0	0		nc|ENSG00000122705|P09496-5|CLTA;ENSG00000122705|ENST00000345519|CLTA;nc|ENSG00000122705|P09496-4|CLTA;nc|ENSG00000122705|P09496-3|CLTA;nc|ENSG00000122705|P09496|CLTA	nc|ENSG00000122705|P09496-5|CLTA	nc|ENSG00000122705|P09496-5|CLTA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.293212890625	2	530.293288	1058.57202	2.0317	0.0010774	-1.9029	-0.0010091	0.12876	6.828E-05	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.76419	1	9480	9480		35.152	0.97948	1	1811300			7746	3242	5417	5423	8946	8946					0.04507939983614051
EQLRKKRYT	9	Unmodified	_EQLRKKRYT_					0	0	0			REV__ENSG00000163440|ENST00000295645|PDCL2	REV__ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.354248046875	2	611.356754	1220.69895	-0.25906	-0.00015838	-0.90242	-0.0005517	-1.1615	-0.00071008	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.66686	3	9318	9318;9376;9465		42.864	7.4938	1	3360200	+		7747	20915	5418	5424	8947;8948;8949	8947					0.09743285928584555
EQLRKKRYT	9	Unmodified	_EQLRKKRYT_					0	0	0			REV__ENSG00000163440|ENST00000295645|PDCL2	REV__ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3544921875	2	611.356754	1220.69895	-0.40517	-0.00024771	-0.92075	-0.00056291	-1.3259	-0.00081061	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.77244	2	9789	9789;9801		32.812	3.6424	1	5373200	+		7748	20915	5418	5424	8950;8951	8950					0.09743285928584555
EQLRKKRYT	9	Unmodified	_EQLRKKRYT_					0	0	0			REV__ENSG00000163440|ENST00000295645|PDCL2	REV__ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3534545898438	2	611.356754	1220.69895	-0.40504	-0.00024762	-0.069959	-4.277E-05	-0.475	-0.00029039	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.69624	1	9958	9958		40.778	2.9666	1	12417000	+		7749	20915	5418	5424	8952	8952					0.09743285928584555
EQLRKKRYT	9	Unmodified	_EQLRKKRYT_					0	0	0			REV__ENSG00000163440|ENST00000295645|PDCL2	REV__ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3546142578125	2	611.356754	1220.69895	2.1766	0.0013307	-3.4744	-0.0021241	-1.2977	-0.00079338	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.69624	1	9960	9960		40.778	5.6261	1	5823000	+		7750	20915	5418	5424	8953	8953					0.09743285928584555
EQLRKKRYT	9	Unmodified	_EQLRKKRYT_					0	0	0			REV__ENSG00000163440|ENST00000295645|PDCL2	REV__ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3533325195312	2	611.356754	1220.69895	2.4219	0.0014807	-3.0766	-0.0018809	-0.65465	-0.00040023	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.73802	1	10159	10159		37.812	4.9991	1	12656000	+		7751	20915	5418	5424	8954	8954					0.09743285928584555
EQLRKKRYT	9	Unmodified	_EQLRKKRYT_					0	0	0			REV__ENSG00000163440|ENST00000295645|PDCL2	REV__ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.354248046875	2	611.356754	1220.69895	0.21558	0.0001318	-1.4776	-0.00090335	-1.262	-0.00077155	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.69624	4	9847	9847;9859;9894;10001		40.778	4.3314	1	5379900	+		7752	20915	5418	5424	8955;8956;8957;8958	8955					0.09743285928584555
EQLRKKRYT	9	Unmodified	_EQLRKKRYT_					0	0	0			REV__ENSG00000163440|ENST00000295645|PDCL2	REV__ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.353759765625	2	611.356754	1220.69895	0.21646	0.00013233	-0.8106	-0.00049557	-0.59414	-0.00036323	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.69624	1	10038	10038		40.778	4.4605	1	12399000	+		7753	20915	5418	5424	8959	8959					0.09743285928584555
EQLRKKRYT	9	Unmodified	_EQLRKKRYT_					0	0	0			REV__ENSG00000163440|ENST00000295645|PDCL2	REV__ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.35498046875	2	611.356754	1220.69895	1.1383	0.00069592	-2.4619	-0.0015051	-1.3236	-0.0008092	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.77244	2	9551	9551;9673		32.812	3.6424	1	7316900	+		7754	20915	5418	5424	8960;8961	8960					0.09743285928584555
EQLRKKRYT	9	Unmodified	_EQLRKKRYT_					0	0	0			REV__ENSG00000163440|ENST00000295645|PDCL2	REV__ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3534545898438	2	611.356754	1220.69895	0.85002	0.00051967	-2.1096	-0.0012897	-1.2596	-0.00077008	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.77244	2	9681	9565;9681		32.812	1.2826	1	6836400	+		7755	20915	5418	5424	8962;8963	8963					0.09743285928584555
EQLRKKRYT	9	Unmodified	_EQLRKKRYT_					0	0	0			REV__ENSG00000163440|ENST00000295645|PDCL2	REV__ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3543701171875	2	611.356754	1220.69895	-1.2523	-0.00076561	-0.012793	-7.8212E-06	-1.2651	-0.00077343	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.73802	1	9496	9496		37.812	3.639	1	5978100	+		7756	20915	5418	5424	8964	8964					0.09743285928584555
EQLRTAAR	8	Unmodified	_EQLRTAAR_					0	0	0			REV__nc|ENSG00000125844|Q9P2E9-3|RRBP1	REV__nc|ENSG00000125844|Q9P2E9-3|RRBP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7675476074219	2	472.76724	943.519927	0.6034	0.00028527	-0.84746	-0.00040065	-0.24406	-0.00011538	472.7667330259924	81.565	1.9694	81.709	80.825	82.794	0.14352					77	45	2	0	0	0	0.4196	1	7970	7970		5.9211	0	1	162340	+		7757	18673	5419	5425	8965	8965					0.04590821360500286
EQLSNMIVR	9	Unmodified	_EQLSNMIVR_					0	0	0		ENSG00000105329|ENST00000221930|TGFB1	ENSG00000105329|ENST00000221930|TGFB1	ENSG00000105329|ENST00000221930|TGFB1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.2921142578125	2	545.289691	1088.56483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.477	1	22.477	21.977	22.977	0								0	0	0	0.29796	1	667	667		31.53	2.3803	1				7758	2204	5420	5426	8966	8966					0.024088841115371906
EQLSSTEKLQ	10	Unmodified	_EQLSSTEKLQ_					0	0	0			REV__nc|ENSG00000067177|P46020-3|PHKA1	REV__nc|ENSG00000067177|P46020-3|PHKA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.8036499023438	2	581.801143	1161.58773	0.11403	6.6344E-05	4.3387	0.0025242	4.4527	0.0025906	581.8035838058198	64.735	1.1415	64.7	64.269	65.41	-0.034798					108	38	4	0	0	0	0.19302	1	6181	6181		87.696	0	1	2150000	+		7759	16537	5421	5427	8967	8967					0.013401817100202607
EQNEKFYTHL	10	Unmodified	_EQNEKFYTHL_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.8819274902344	3	436.878815	1307.61462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.94	1	113.05	112.55	113.55	0.10638								0	0	0	0.45132	1	12142	12142		11.636	0.18131	1		+		7760	16117	5422	5428	8968	8968					-0.026887096787959308
EQPILLSE	8	Unmodified	_EQPILLSE_					0	0	0		nc|ENSG00000145808|Q8TE59|ADAMTS19;ENSG00000145808|ENST00000274487|ADAMTS19	nc|ENSG00000145808|Q8TE59|ADAMTS19	nc|ENSG00000145808|Q8TE59|ADAMTS19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7534484863281	2	464.752933	927.491313	-0.27404	-0.00012736	1.2582	0.00058477	0.98421	0.00045741	464.75359999494833	29.712	0.6353	29.669	29.38	30.015	-0.043095					21	16	2	0	0	0	0.87922	1	1571	1571		31.955	2.8053	1	35391			7761	4794	5423	5429	8969	8969					0.024666589407047468
EQPLAPPVQPG	11	Unmodified	_EQPLAPPVQPG_					0	0	0			REV__nc|ENSG00000159753|Q6F5E8-2|CARMIL2	REV__nc|ENSG00000159753|Q6F5E8-2|CARMIL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.804931640625	2	566.803488	1131.59242	0.86268	0.00048897	2.5987	0.001473	3.4614	0.0019619	566.804831631569	62.733	2.0024	63.288	62.559	64.561	0.55449					102	46	4	0	0	0	0.66929	1	6855	6855		36.447	2.2742	1	716580	+		7762	20679	5424	5430	8970	8970					0.031891106434159155
EQPLERRYQ	9	Unmodified	_EQPLERRYQ_					0	0	0		ENSG00000188760|ENST00000373883|TMEM198	ENSG00000188760|ENST00000373883|TMEM198	ENSG00000188760|ENST00000373883|TMEM198	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.879150390625	3	406.879038	1217.61528	0.020852	8.4844E-06	0.39792	0.00016191	0.41877	0.00017039	406.879159642832	19.32	1.0891	18.69	18.401	19.49	-0.6296					52	23	4	0	0	0	0.70638	1	502	502		40.058	0	1	910950			7763	7956	5425	5431	8971	8971					0.015181297608933164
EQPNILKTF	9	Unmodified	_EQPNILKTF_					0	0	0			REV__ENSG00000077235|ENST00000356183|GTF3C1	REV__ENSG00000077235|ENST00000356183|GTF3C1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.1603393554688	2	545.300581	1088.58661	-1.3625	-0.00074297	-2.5425	-0.0013864	-3.905	-0.0021294	545.2989873247323	46.34	0.32549	46.812	46.654	46.98	0.47139					10	7	2	0	0	0	0.20789	1	4337	4337		29.17	9.8101	1	275170	+		7764	16739	5426	5432	8972	8972					0.0458601213174461
EQPQLRLTLI	10	Unmodified	_EQPQLRLTLI_					0	0	0		ENSG00000113211|ENST00000231136|PCDHB6	ENSG00000113211|ENST00000231136|PCDHB6	ENSG00000113211|ENST00000231136|PCDHB6	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.2427978515625	3	404.243317	1209.70812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.971	1	30.924	30.424	31.424	-0.047064								0	0	0	0.45132	1	1722	1722		27.644	4.266	1				7765	2704	5427	5433	8973	8973					0.11165634494273036
EQQRAELRRYL	11	Unmodified	_EQQRAELRRYL_					0	0	0			REV__ENSG00000186185|ENST00000593135|KIF18B	REV__ENSG00000186185|ENST00000593135|KIF18B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.30255126953125	3	487.935546	1460.78481	-0.82452	-0.00040231	-1.6534	-0.00080673	-2.4779	-0.001209	487.9350567213026	16.145	0.12487	16.193	16.141	16.266	0.047802					7	5	2	0	0	0	0.1767	1	126	126		13.508	0	1	24927	+		7766	22830	5428	5434	8974	8974					0.07284826043451176
EQQRFKEE	8	Unmodified	_EQQRFKEE_					0	0	0		nc|ENSG00000196632|Q9BYP7-3|WNK3;nc|ENSG00000196632|Q9BYP7-4|WNK3;nc|ENSG00000196632|Q9BYP7-2|WNK3;ENSG00000196632|ENST00000354646|WNK3	nc|ENSG00000196632|Q9BYP7-3|WNK3	nc|ENSG00000196632|Q9BYP7-3|WNK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.2642211914062	2	547.26727	1092.51999	0.43083	0.00023578	-1.3979	-0.00076501	-0.96705	-0.00052923	547.2663369111906	27.918	0.58229	27.879	27.673	28.255	-0.038523					21	12	3	0	0	0	0.88185	1	1372	1372		32.812	2.4947	1	28929			7767	8083	5429	5435	8975	8975					-0.022572234301378558
EQRAKEVSL	9	Unmodified	_EQRAKEVSL_					0	0	0			REV__ENSG00000072501|ENST00000322213|SMC1A	REV__ENSG00000072501|ENST00000322213|SMC1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2931518554688	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.76419	1	9010	9010		35.152	1.2304	1	1390700	+		7768	16648	5430	5436	8976	8976					0.04507939983614051
EQRQLLRLR	9	Unmodified	_EQRQLLRLR_					0	0	0			REV__nc|ENSG00000164403|Q2M3G4-2|SHROOM1	REV__nc|ENSG00000164403|Q2M3G4-2|SHROOM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.58270263671875	3	404.582556	1210.72584	-0.33509	-0.00013557	0.65931	0.00026675	0.32422	0.00013117	404.58283935188774	30.988	0.89448	30.941	30.538	31.432	-0.047064					48	22	3	0	0	0	0.78536	1	1729	1729		29.17	0	1	104710	+		7769	21079	5431	5437	8977	8977					0.12890394539772387
EQSLETVEK	9	Unmodified	_EQSLETVEK_					0	0	0			REV__ENSG00000112242|ENST00000346618|E2F3	REV__ENSG00000112242|ENST00000346618|E2F3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.7693481445312	2	531.769311	1061.52407	-0.186	-9.8911E-05	0.69785	0.0003711	0.51185	0.00027218	531.7697837540883	36.188	0.41045	36.132	35.879	36.29	-0.055904					20	8	3	0	0	0	0.71772	1	2396	2396		39.253	1.4413	1	141670	+		7770	17932	5432	5438	8978	8978					-0.004231787271010035
EQSLETVEK	9	Unmodified	_EQSLETVEK_					0	0	0			REV__ENSG00000112242|ENST00000346618|E2F3	REV__ENSG00000112242|ENST00000346618|E2F3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	531.769311	1061.52407	0.027257	1.4494E-05	1.0256	0.00054538	1.0529	0.00055988	531.7698910377059	36.169	0.45559	36.15	35.876	36.331	-0.018673	0.038306	0.00034904	NaN	39.253	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73552	+		7771	17932	5432	5438							-0.004231787271010035
EQSLETVEK	9	Unmodified	_EQSLETVEK_					0	0	0			REV__ENSG00000112242|ENST00000346618|E2F3	REV__ENSG00000112242|ENST00000346618|E2F3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	531.769311	1061.52407	-0.186	-9.8911E-05	0.69785	0.0003711	0.51185	0.00027218	531.7697837540883	36.188	0.41045	36.132	35.879	36.29	-0.055904	0.020084	4.6501E-07	NaN	39.253	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141670	+		7772	17932	5432	5438							-0.004231787271010035
EQSLETVEK	9	Unmodified	_EQSLETVEK_					0	0	0			REV__ENSG00000112242|ENST00000346618|E2F3	REV__ENSG00000112242|ENST00000346618|E2F3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	531.769311	1061.52407	-0.14509	-7.7154E-05	-1.1788	-0.00062682	-1.3238	-0.00070398	532.2694690493239	36.117	0.74141	36.148	35.959	36.7	0.031132	0.03657	-0.0019954	NaN	39.253	24	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110150	+		7773	17932	5432	5438							-0.004231787271010035
EQSLETVEK	9	Unmodified	_EQSLETVEK_					0	0	0			REV__ENSG00000112242|ENST00000346618|E2F3	REV__ENSG00000112242|ENST00000346618|E2F3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	531.769311	1061.52407	0.24891	0.00013236	-0.79847	-0.0004246	-0.54956	-0.00029224	531.7695166450312	35.914	0.46465	36.017	35.817	36.281	0.10306	-0.094961	-0.0015909	NaN	39.253	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80204	+		7774	17932	5432	5438							-0.004231787271010035
EQSPDRLW	8	Unmodified	_EQSPDRLW_					0	0	0			REV__ENST00000530657.1_1_11:85906626-85907241:+|nuORF	REV__ENST00000530657.1_1_11:85906626-85907241:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3153686523438	2	515.751256	1029.48796	1.0319	0.00053219	-1.1191	-0.0005772	-0.087262	-4.5005E-05	515.7505852832843	22.599	0.44185	22.181	21.97	22.412	-0.41879					16	9	2	0	0	0	0.4196	1	927	927		29.15	0	1	48745	+		7775	21497	5433	5439	8979	8979					-0.025605911132970505
EQSQILIQHP	10	Unmodified	_EQSQILIQHP_					0	0	0		nc|ENSG00000170653|P17544-2|ATF7;nc|ENSG00000170653|P17544-3|ATF7;ENSG00000170653|ENST00000420353|ATF7;nc|ENSG00000170653|P17544-1|ATF7	nc|ENSG00000170653|P17544-2|ATF7	nc|ENSG00000170653|P17544-2|ATF7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.8206787109375	2	596.81967	1191.62479	-0.39363	-0.00023493	0.75089	0.00044815	0.35726	0.00021322	596.8197250421339	32.795	0.43291	32.806	32.564	32.997	0.010899					17	10	2	0	0	0	0.73395	1	1846	1846		42.864	0	1	43753			7776	6607	5434	5440	8980	8980					0.03663898046443137
EQSRARLI	8	Unmodified	_EQSRARLI_					0	0	0		ENSG00000136286|ENST00000258787|MYO1G;ENST00000463516.5_1_7:45003626-45005995:-|nuORF;ENST00000483585.5_1_7:45002340-45005995:-|nuORF	ENSG00000136286|ENST00000258787|MYO1G	ENSG00000136286|ENST00000258787|MYO1G	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.8118591308594	2	486.78289	971.551228	0.15779	7.6808E-05	3.7269	0.0018142	3.8847	0.001891	486.7847143584262	17.689	0.3099	17.071	16.878	17.188	-0.61836					9	7	2	0	0	0	0.4196	1	306	306		31.955	0	1	54236			7777	4104	5435	5441	8981	8981					0.06431394394610379
EQSYVTAH	8	Unmodified	_EQSYVTAH_					0	0	0			REV__ENSG00000164068|ENST00000327697|RNF123	REV__ENSG00000164068|ENST00000327697|RNF123	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2321472167969	2	467.716882	933.41921	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.662	1	74.049	73.549	74.549	0.38779								0	0	0	0.29344	1	8275	8275		31.955	1.4512	1		+		7778	21022	5436	5442	8982	8982					-0.05016255413011095
EQTEESVIH	9	Unmodified	_EQTEESVIH_					0	0	0			REV__L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|72|2|sense	REV__L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|72|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2525024414062	2	536.251286	1070.48802	-0.15537	-8.3319E-05	0.35514	0.00019044	0.19976	0.00010712	536.251337968255	30.959	0.69424	30.962	30.579	31.274	0.0037193					40	15	4	0	0	0	0.17307	1	2090	2090		79.451	16.145	1	758960	+		7779	29625	5437	5443	8983	8983					-0.04440635903961265
EQVTYTCATY	10	Unmodified	_EQVTYTCATY_					0	0	0		nc|ENSG00000000971|P08603|CFH;ENSG00000000971|ENST00000367429|CFH	nc|ENSG00000000971|P08603|CFH	nc|ENSG00000000971|P08603|CFH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.7557983398438	2	589.755346	1177.49614	-0.58294	-0.00034379	1.2032	0.00070956	0.62021	0.00036577	589.756006378897	52.166	2.6883	52.589	51.107	53.795	0.42348					116	64	2	0	0	0	0.42393	1	5187	5187		62.107	14.45	1	1154100			7780	647	5438	5444	8984	8984					-0.08550824978829041
EQWWRQPVRFH	11	Unmodified	_EQWWRQPVRFH_					0	0	0			REV__ENST00000545260.5_2_10:34398874-34399204:-|nuORF	REV__ENST00000545260.5_2_10:34398874-34399204:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2772216796875	3	523.600498	1567.77966	2.2063	0.0011552	1.1074	0.00057981	3.3136	0.001735	523.6012186182821	26.595	0.31778	26.254	26.051	26.368	-0.34035					10	6	2	0	0	0	0.181	1	1459	1459		5.6988	0	1	39886	+		7781	28520	5439	5445	8985	8985					0.018485669714664255
EQYGTPNN	8	Unmodified	_EQYGTPNN_					0	0	0		nc|ENSG00000005381|P05164-2|MPO;ENSG00000005381|ENST00000225275|MPO;nc|ENSG00000005381|P05164-3|MPO	nc|ENSG00000005381|P05164-2|MPO	nc|ENSG00000005381|P05164-2|MPO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.5648193359375	2	461.698689	921.382825	1.1947	0.0005516	-2.5702	-0.0011866	-1.3754	-0.00063504	461.6973548711491	36.551	0.49294	36.991	36.786	37.279	0.44043					15	11	2	0	0	0	0.4196	1	2909	2909		19.104	0	1	74034			7782	683	5440	5446	8986	8986					-0.0810113230971865
EQYTALPENSI	11	Unmodified	_EQYTALPENSI_					0	0	0			REV__ENSG00000100154|ENST00000397906|TTC28	REV__ENSG00000100154|ENST00000397906|TTC28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2058410644531	3	422.206709	1263.5983	-0.31516	-0.00013306	-1.6019	-0.00067634	-1.9171	-0.0008094	422.2059111390231	28.285	0.52817	28.189	27.929	28.458	-0.096945					28	12	3	0	0	0	0.59831	1	1697	1697		44.639	10.553	1	221400	+		7783	17144	5441	5447	8987	8987					-0.022958356355729848
ERAFALEEP	9	Unmodified	_ERAFALEEP_					0	0	0			REV__ENSG00000147536|ENST00000276533|GINS4	REV__ENSG00000147536|ENST00000276533|GINS4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2669677734375	2	531.266739	1060.51892	-0.90022	-0.00047826	0.83453	0.00044336	-0.065694	-3.4901E-05	531.2670358188946	44.918	0.77689	45.762	45.419	46.196	0.84437					44	18	3	0	0	0	0.77696	1	4155	4155		31.53	3.2755	1	1265400	+		7784	15920	5442	5448	8988	8988					-0.008914377990549838
ERAKGAPA	8	Unmodified	_ERAKGAPA_					0	0	0		ENSG00000171695|ENST00000302096|LKAAEAR1;nc|ENSG00000171695|Q8TD35-2|LKAAEAR1	ENSG00000171695|ENST00000302096|LKAAEAR1	ENSG00000171695|ENST00000302096|LKAAEAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2258605957031	2	400.224677	798.434801	-0.073338	-2.9352E-05	4.3831	0.0017542	4.3097	0.0017249	400.22636614843225	35.501	1.6335	35.44	35.254	36.887	-0.060337					96	46	3	0	0	0	0.92457	1	1880	1880		47.916	1.9636	1	419330			7785	6697	5443	5449	8989	8989					0.027520758947048307
ERASCLLLL	9	Unmodified	_ERASCLLLL_					0	0	0		ENSG00000170458|ENST00000302014|CD14	ENSG00000170458|ENST00000302014|CD14	ENSG00000170458|ENST00000302014|CD14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8074951171875	2	509.291702	1016.56885	-0.98085	-0.00049954	-0.5067	-0.00025806	-1.4875	-0.0007576	509.2906563593123	43.484	0.3991	44.258	44.103	44.502	0.7738					12	9	2	0	0	0	0.20433	1	3949	3949		79.451	0	1	234300			7786	6593	5444	5450	8990	8990					0.06122973605260995
ERCQELYRK	9	Unmodified	_ERCQELYRK_					0	0	0		nc|ENSG00000157106|Q96Q15-4|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1;nc|ENSG00000157106|Q96Q15-2|SMG1;ENSG00000157106|ENST00000446231|SMG1	nc|ENSG00000157106|Q96Q15-4|SMG1	nc|ENSG00000157106|Q96Q15-4|SMG1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.8187866210938	2	612.811322	1223.60809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.506	1	15.425	14.925	15.925	-0.080017								0	0	0	0.31738	1	29	29		24.519	0	1				7787	5411	5445	5451	8991	8991					0.005230738888030828
ERDAWKTQKT	10	Unmodified	_ERDAWKTQKT_					0	0	0		ENST00000489973.6_1_13:111545392-111545482:-|nuORF	ENST00000489973.6_1_13:111545392-111545482:-|nuORF	ENST00000489973.6_1_13:111545392-111545482:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	631.8281860351562	2	631.828026	1261.6415	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.596	1	27.596	27.096	28.096	0								0	0	0	0.45132	1	1113	1113		29.17	2.4771	1				7788	12662	5446	5452	8992	8992					0.02114398932349104
ERDLVTNVL	9	Unmodified	_ERDLVTNVL_					0	0	0			REV__nc|ENSG00000169851|O60245|PCDH7	REV__nc|ENSG00000169851|O60245|PCDH7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.7941284179688	2	529.795663	1057.57677	-0.036631	-1.9407E-05	-0.66584	-0.00035276	-0.70247	-0.00037216	529.795424546102	66.887	0.44619	66.903	66.691	67.138	0.016205					30	19	2	0	0	0	0.58063	1	6277	6277		47.96	0	1	73552	+		7789	21605	5447	5453	8993	8993					0.05028824126384279
ERDLVTNVL	9	Unmodified	_ERDLVTNVL_					0	0	0			REV__nc|ENSG00000169851|O60245|PCDH7	REV__nc|ENSG00000169851|O60245|PCDH7	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	529.795663	1057.57677	-0.036631	-1.9407E-05	-0.66584	-0.00035276	-0.70247	-0.00037216	529.795424546102	66.887	0.44619	66.903	66.691	67.138	0.016205	0.10795	-1.2882E-05	NaN	47.96	30	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73552	+		7790	21605	5447	5453							0.05028824126384279
ERDLVTNVL	9	Unmodified	_ERDLVTNVL_					0	0	0			REV__nc|ENSG00000169851|O60245|PCDH7	REV__nc|ENSG00000169851|O60245|PCDH7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	529.795663	1057.57677	-0.19484	-0.00010323	-0.60187	-0.00031887	-0.79671	-0.00042209	529.7952360784926	66.689	0.42215	66.717	66.529	66.951	0.028587	-0.077909	5.4894E-05	NaN	47.96	30	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93265	+		7791	21605	5447	5453							0.05028824126384279
EREIKILPKNN	11	Unmodified	_EREIKILPKNN_					0	0	0		L1M4_dup6020|chr5:141114522-141116487:+|3.0372164577870437|0.2312685431788466|3.72|63.0|57|3|sense	L1M4_dup6020|chr5:141114522-141116487:+|3.0372164577870437|0.2312685431788466|3.72|63.0|57|3|sense	L1M4_dup6020|chr5:141114522-141116487:+|3.0372164577870437|0.2312685431788466|3.72|63.0|57|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.93243408203125	3	451.933143	1352.7776	0.75363	0.00034059	-1.7779	-0.00080347	-1.0242	-0.00046289	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.75779	1	10576	10576		20.315	0.28454	1	952120			7792	14520	5448	5454	8994	8994					0.11532093443042868
EREKLEKRLLK	11	Unmodified	_EREKLEKRLLK_					0	0	0			REV__ENSG00000132740|ENST00000255078|IGHMBP2	REV__ENSG00000132740|ENST00000255078|IGHMBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.30218505859375	3	481.299825	1440.87765	0.063201	3.0419E-05	3.0351	0.0014608	3.0983	0.0014912	481.30062562243074	16.808	0.40087	16.868	16.711	17.112	0.059269					27	16	3	0	0	0	0.75457	1	185	185		21.032	2.5012	1	97052	+		7793	19025	5449	5455	8995	8995					0.17484330776824208
EREKLEKRLLK	11	Unmodified	_EREKLEKRLLK_					0	0	0			REV__ENSG00000132740|ENST00000255078|IGHMBP2	REV__ENSG00000132740|ENST00000255078|IGHMBP2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	481.299825	1440.87765	-0.9223	-0.0004439	3.8033	0.0018305	2.881	0.0013866	481.30161197469823	16.859	0.25425	16.905	16.765	17.02	0.0457	0.0040737	0.00053746	NaN	21.032	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84674	+		7794	19025	5449	5455							0.17484330776824208
EREKLEKRLLK	11	Unmodified	_EREKLEKRLLK_					0	0	0			REV__ENSG00000132740|ENST00000255078|IGHMBP2	REV__ENSG00000132740|ENST00000255078|IGHMBP2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	481.299825	1440.87765	0.063201	3.0419E-05	3.0351	0.0014608	3.0983	0.0014912	481.30062562243074	16.808	0.40087	16.868	16.711	17.112	0.059269	-0.033439	-0.00057172	NaN	21.032	27	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97052	+		7795	19025	5449	5455							0.17484330776824208
EREKLEKRLLK	11	Unmodified	_EREKLEKRLLK_					0	0	0			REV__ENSG00000132740|ENST00000255078|IGHMBP2	REV__ENSG00000132740|ENST00000255078|IGHMBP2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	481.299825	1440.87765	0.70911	0.0003413	2.57	0.001237	3.2792	0.0015783	481.30115588192666	16.954	0.32367	16.93	16.773	17.097	-0.024035	0.029365	-0.0012433	NaN	21.032	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85005	+		7796	19025	5449	5455							0.17484330776824208
EREPPAILFRR	11	Unmodified	_EREPPAILFRR_					0	0	0		ENSG00000074855|ENST00000159087|ANO8;nc|ENSG00000074855|Q9HCE9-2|ANO8;ENST00000597643.5_1_19:17434328-17439993:-|nuORF	ENSG00000074855|ENST00000159087|ANO8	ENSG00000074855|ENST00000159087|ANO8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.9483947753906	3	461.933366	1382.77827	-1.0612	-0.00049018	-2.7177	-0.0012554	-3.7789	-0.0017456	461.9324658798144	107.61	0.24541	107.75	107.61	107.86	0.13866					15	5	3	0	0	0	0.17705	1	11580	11580		25.892	9.9711	1	286930			7797	1316	5450	5456	8996	8996					0.10218932882708032
EREQKVIN	8	Unmodified	_EREQKVIN_					0	0	0			REV__ENSG00000133640|ENST00000393217|LRRIQ1	REV__ENSG00000133640|ENST00000393217|LRRIQ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2798156738281	2	508.28018	1014.54581	0.22565	0.0001147	-0.11322	-5.7546E-05	0.11244	5.715E-05	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.90983	1	9199	9199		42.396	0	1	1820400	+		7798	19087	5451	5457	8997	8997					0.039116708121468946
ERERKLREEHI	11	Unmodified	_ERERKLREEHI_					0	0	0		ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.94305419921875	3	498.942701	1493.80627	0.81029	0.00040429	0.51268	0.0002558	1.323	0.00066008	498.9429898071896	50.142	0.77797	50.987	50.599	51.377	0.84501					71	18	5	0	0	0	0.71394	1	4918	4918		29.245	9.2145	1	7799100			7799	5531	5452	5458	8998	8998					0.07912211072175523
ERERPLSLLQL	11	Unmodified	_ERERPLSLLQL_					0	0	0		ENSG00000181856|ENST00000317370|SLC2A4;nc|ENSG00000181856|P14672-2|SLC2A4	ENSG00000181856|ENST00000317370|SLC2A4	ENSG00000181856|ENST00000317370|SLC2A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.93267822265625	3	451.933143	1352.7776	-1.2099	-0.00054677	0.20074	9.0723E-05	-1.0091	-0.00045605	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.70847	1	10570	10570		30.139	6.7612	1	1176100			7800	7410	5453	5459	8999	8999					0.11532093443042868
ERETILTKN	9	Unmodified	_ERETILTKN_					0	0	0			REV__ENSG00000198185|ENST00000692313|ZNF334	REV__ENSG00000198185|ENST00000692313|ZNF334	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.305908203125	2	552.306395	1102.59824	0.78014	0.00043088	-0.74693	-0.00041253	0.033219	1.8347E-05	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.75725	1	9406	9406		36.447	2.5251	1	1841700	+		7801	23306	5454	5460	9000	9000					0.05104209155092576
ERFKVIMKN	9	Unmodified	_ERFKVIMKN_					0	0	0			REV__nc|ENSG00000163808|Q9NS87-4|KIF15	REV__nc|ENSG00000163808|Q9NS87-4|KIF15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.8331909179688	2	582.831526	1163.6485	-1.3452	-0.00078404	3.291	0.0019181	1.9457	0.001134	582.8334573704366	94.259	3.5437	94.457	93.113	96.657	0.19827					191	84	3	0	0	0	0.78536	1	9558	9558		29.15	5.6269	1	775360	+		7802	20974	5455	5461	9001	9001					0.07322040279268549
ERFLLLFR	8	Unmodified	_ERFLLLFR_					0	0	0		ENSG00000182405|ENST00000397766|PGBD4	ENSG00000182405|ENST00000397766|PGBD4	ENSG00000182405|ENST00000397766|PGBD4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3334350585938	2	547.329476	1092.6444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.74	1	112.75	112.25	113.25	0.016953								0	0	0	0.30884	1	13658	13658		13.775	0.81615	1				7803	7454	5456	5462	9002	9002					0.10178318847874834
ERFPLKMLN	9	Unmodified	_ERFPLKMLN_					0	0	0		ENST00000263857.10_1_2:86249175-86249337:-|nuORF	ENST00000263857.10_1_2:86249175-86249337:-|nuORF	ENST00000263857.10_1_2:86249175-86249337:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.319091796875	2	574.318251	1146.62195	1.0954	0.0006291	1.0691	0.00061403	2.1645	0.0012431	574.3187099892803	94.307	4.5457	94.353	93.159	97.704	0.046173					261	107	4	0	0	0	0.76764	1	9873	9873		34.173	2.6427	1	1593500			7804	9466	5457	5463	9003	9003					0.054503513879353704
ERFRKFQFTWR	11	Unmodified	_ERFRKFQFTWR_					0	0	0			REV__ENST00000443361.1_1_9:108287470-108288637:+|nuORF	REV__ENST00000443361.1_1_9:108287470-108288637:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.2899169921875	3	534.288031	1599.84226	0.32514	0.00017372	2.8309	0.0015125	3.1561	0.0016863	534.2895008039583	33.083	0.979	33.029	32.72	33.699	-0.05434					55	23	3	0	0	0	0.76892	1	1997	1997		17.833	12.42	1	281820	+		7805	26778	5458	5464	9004	9004					0.06633713039695976
ERFRLTKR	8	Unmodified	_ERFRLTKR_					0	0	0			REV__nc|ENSG00000121797|O00421-2|CCRL2	REV__nc|ENSG00000121797|O00421-2|CCRL2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3202514648438	2	553.333082	1104.65161	1.284	0.00071051	-3.8056	-0.0021057	-2.5215	-0.0013952	553.33056550115	98.517	0.86816	98.565	98.232	99.1	0.048157					25	19	2	0	0	0	0.4196	1	10476	10476		10.265	1.0823	1	97686	+		7806	29817	5459	5465	9005	9005					0.10347051448275124
ERFRTITT	8	Unmodified	_ERFRTITT_					0	0	0		ENST00000590899.5_1_19:16222711-16232755:+|nuORF;ENST00000589697.1_1_19:16222732-16236504:+|nuORF;ENST00000587156.5_1_19:16222711-16238468:+|nuORF;nc|ENSG00000167461|P61006-2|RAB8A;ENSG00000167461|ENST00000300935|RAB8A;ENSG00000166128|ENST00000321437|RAB8B	ENST00000590899.5_1_19:16222711-16232755:+|nuORF	ENST00000590899.5_1_19:16222711-16232755:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.2816162109375	2	512.282723	1022.55089	0.68771	0.0003523	-3.3979	-0.0017407	-2.7102	-0.0013884	512.280910573943	86.397	3.3825	86.546	85.297	88.68	0.14902					148	79	2	0	0	0	0.89043	1	8525	8525		35.618	1.4457	1	371240			7807	6157	5460	5466	9006	9006					0.0405197467475773
ERGERRPQ	8	Unmodified	_ERGERRPQ_					0	0	0		ENST00000607541.1_1_3:57113329-57113575:+|nuORF	ENST00000607541.1_1_3:57113329-57113575:+|nuORF	ENST00000607541.1_1_3:57113329-57113575:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.2193603515625	2	514.273221	1026.53189	0.41432	0.00021307	2.3945	0.0012314	2.8088	0.0014445	514.2741926205532	30.29	0.52566	30.201	29.96	30.486	-0.089544					15	11	2	0	0	0	0.4196	1	1989	1989		44.117	0	1	132780			7808	14464	5461	5467	9007	9007					0.019684381036995546
ERGGRLAL	8	Unmodified	_ERGGRLAL_					0	0	0			REV__ENST00000261191.11_1_12:27090906-27091155:-|nuORF	REV__ENST00000261191.11_1_12:27090906-27091155:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.2560729980469	2	436.259051	870.503549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.642	1	23.26	22.76	23.76	-0.38178								0	0	0	0.29755	1	1065	1065		24.203	3.7209	1		+		7809	24379	5462	5468	9008	9008					0.06311740194405502
ERGRIPAE	8	Unmodified	_ERGRIPAE_					0	0	0		ENST00000472864.1_1_10:43699111-43699222:-|nuORF	ENST00000472864.1_1_10:43699111-43699222:-|nuORF	ENST00000472864.1_1_10:43699111-43699222:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.25384521484375	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.90983	1	8599	8599		42.396	0	1	1449300			7810	12273	5463	5469	9009	9009					0.027191324691784757
ERHLKRKTL	9	Unmodified	_ERHLKRKTL_					0	0	0			REV__nc|ENSG00000183914|Q9P225-2|DNAH2	REV__nc|ENSG00000183914|Q9P225-2|DNAH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8671264648438	2	590.867289	1179.72002	3.2055	0.001894	-4.0778	-0.0024095	-0.87234	-0.00051544	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.76764	1	12675	12675		34.173	3.6689	1	6398400	+		7811	22634	5464	5470	9010	9010					0.13735296028130506
ERHRRWVRARR	11	Unmodified	_ERHRRWVRARR_					0	0	0			REV__ENSG00000204779|ENST00000377420|FOXD4L5	REV__ENSG00000204779|ENST00000377420|FOXD4L5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.361328125	3	526.641802	1576.90358	0.39814	0.00020968	-3.0366	-0.0015992	-2.6384	-0.0013895	526.6410979553218	33.844	0.071892	33.798	33.747	33.819	-0.045815					4	2	2	0	0	0	0.1838	1	1671	1671		6.001	4.5823	1	30622	+		7812	21631	5465	5471	9011	9011					0.1382008258233327
ERIATTIRT	9	Unmodified	_ERIATTIRT_					0	0	0			REV__nc|ENSG00000197415|Q14D04-2|VEPH1	REV__nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8103637695312	2	530.809105	1059.60366	2.1944	0.0011648	1.3979	0.00074204	3.5923	0.0019069	530.8089951106499	102.41	1.0747	102.67	101.8	102.88	0.26323					40	26	3	0	0	0	0.33718	1	12424	12424		62.107	5.3864	1	654720	+		7813	23228	5466	5472	9012	9012					0.0762393273755606
ERIHRTPKP	9	Unmodified	_ERIHRTPKP_					0	0	0			REV__ENSG00000089116|ENST00000261731|LHX5	REV__ENSG00000089116|ENST00000261731|LHX5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3282470703125	2	567.330539	1132.64652	1.8589	0.0010546	-3.1789	-0.0018035	-1.32	-0.00074889	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.7932	1	10304	10304		26.693	2.1737	1	15439000	+		7814	16962	5467	5473	9013	9013					0.08550747585650242
ERIHRTPKP	9	Unmodified	_ERIHRTPKP_					0	0	0			REV__ENSG00000089116|ENST00000261731|LHX5	REV__ENSG00000089116|ENST00000261731|LHX5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.330322265625	2	567.330539	1132.64652	1.203	0.00068247	-1.0748	-0.00060977	0.12815	7.2702E-05	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.7932	1	10693	10693		20.947	0	1	4990000	+		7815	16962	5467	5473	9014	9014					0.08550747585650242
ERIIVRAS	8	Unmodified	_ERIIVRAS_					0	0	0		ENSG00000166268|ENST00000552032|MYRFL;nc|ENSG00000124920|Q9Y2G1-2|MYRF;ENSG00000124920|ENST00000278836|MYRF	ENSG00000166268|ENST00000552032|MYRFL;nc|ENSG00000124920|Q9Y2G1-2|MYRF	ENSG00000166268|ENST00000552032|MYRFL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28668212890625	2	472.287808	942.561064	-0.10777	-5.0899E-05	0.78283	0.00036972	0.67506	0.00031882	472.28822632697705	99.434	2.1055	99.484	98.705	100.81	0.049828					105	48	3	0	0	0	0.81897	1	10590	10590		20.947	0	1	555450			7816	6174;3369	5468	5474	9015	9015					0.0874858239999412
ERIKPDLITG	10	Unmodified	_ERIKPDLITG_					0	0	0			REV__nc|ENSG00000164393|Q8IZF7-2|ADGRF2P	REV__nc|ENSG00000164393|Q8IZF7-2|ADGRF2P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.331298828125	2	571.332413	1140.65027	-1.1055	-0.00063161	-1.221	-0.00069761	-2.3265	-0.0013292	571.3317125893625	102.4	2.1601	102.42	101.65	103.81	0.01989					122	52	4	0	0	0	0.86047	1	10976	10976		23.523	0	1	2384600	+		7817	29991	5469	5475	9016	9016					0.08557372568839128
ERKAGAKG	8	Unmodified	_ERKAGAKG_					0	0	0			REV__ENST00000418448.1_1_13:57889178-57889514:+|nuORF	REV__ENST00000418448.1_1_13:57889178-57889514:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.7395324707031	2	408.737951	815.46135	-0.047648	-1.9476E-05	4.4202	0.0018067	4.3725	0.0017872	408.73963408946304	36.955	2.5653	36.931	36.681	39.246	-0.023975					119	58	3	0	0	0	0.86288	1	2423	2423		26.796	1.3459	1	457600	+		7818	26463	5470	5476	9017	9017					0.04623764786049378
ERKAGAKG	8	Unmodified	_ERKAGAKG_					0	0	0			REV__ENST00000418448.1_1_13:57889178-57889514:+|nuORF	REV__ENST00000418448.1_1_13:57889178-57889514:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.7398681640625	2	408.737951	815.46135	1.5082	0.00061648	2.9117	0.0011901	4.4199	0.0018066	408.739095634202	34.891	2.006	35.101	34.812	36.818	0.21003					151	50	4	0	0	0	0.91977	1	2660	2660		45.952	1.8352	1	5089300	+		7819	26463	5470	5476	9018	9018					0.04623764786049378
ERKAGAKG	8	Unmodified	_ERKAGAKG_					0	0	0			REV__ENST00000418448.1_1_13:57889178-57889514:+|nuORF	REV__ENST00000418448.1_1_13:57889178-57889514:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.7397155761719	2	408.737951	815.46135	1.2573	0.00051389	3.1459	0.0012858	4.4031	0.0017997	408.73920372763826	34.848	1.9965	35.229	34.977	36.973	0.3812					122	50	4	0	0	0	0.91472	1	2782	2782		44.117	5.3107	1	5754800	+		7820	26463	5470	5476	9019	9019					0.04623764786049378
ERKAKRML	8	Unmodified	_ERKAKRML_					0	0	0			REV__ENSG00000079841|ENST00000521978|RIMS1	REV__ENSG00000079841|ENST00000521978|RIMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3140258789062	2	516.310761	1030.60697	2.7794	0.001435	3.1012	0.0016012	5.8806	0.0030362	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.89043	1	10995	10995		35.618	0.46626	1	67991000	+		7821	16792	5471	5477	9020	9020					0.0928890431059699
ERKALLLQAVQ	11	Unmodified	_ERKALLLQAVQ_					0	0	0		ENSG00000158286|ENST00000377939|RNF207;ENST00000496676.5_1_1:6269476-6272097:+|nuORF;ENST00000485539.5_1_1:6269452-6270654:+|nuORF;nc|ENSG00000158286|Q6ZRF8-4|RNF207;nc|ENSG00000158286|Q6ZRF8-3|RNF207	ENSG00000158286|ENST00000377939|RNF207	ENSG00000158286|ENST00000377939|RNF207	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.8932495117188	2	634.887887	1267.76122	2.7957	0.0017749	4.3447	0.0027584	7.1403	0.0045333	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.67778	1	11783	11783		35.152	0.97948	1	42597000			7822	5468	5472	5478	9021	9021					0.13805012276952766
ERKDLVIRVPA	11	Unmodified	_ERKDLVIRVPA_					0	0	0		ENST00000494484.1_1_7:44839011-44839095:+|nuORF;ENST00000435399.1_1_1:45880815-45881013:+|nuORF	ENST00000494484.1_1_7:44839011-44839095:+|nuORF	ENST00000494484.1_1_7:44839011-44839095:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.59771728515625	3	432.597983	1294.77212	-0.96196	-0.00041614	0.089593	3.8758E-05	-0.87237	-0.00037738	432.5979589237285	106.62	0.93322	106.62	106.18	107.11	0					73	20	5	0	0	0	0.7342	1	11054	11054		22.562	0	1	2667500			7823	11708	5473	5479	9022	9022					0.13652414651210165
ERKFLFQEKIR	11	Unmodified	_ERKFLFQEKIR_					0	0	0		ENST00000263895.8_1_2:151343927-151344080:-|nuORF	ENST00000263895.8_1_2:151343927-151344080:-|nuORF	ENST00000263895.8_1_2:151343927-151344080:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.9573669433594	3	498.624421	1492.85143	0.89929	0.00044841	-3.5895	-0.0017898	-2.6902	-0.0013414	498.62268617728625	21.451	1.1498	21.519	20.917	22.067	0.068251					65	41	2	0	0	0	0.77803	1	568	568		15.921	0.58318	1	54885			7824	9467	5474	5480	9023	9023					0.12472061605353701
ERKLKDAVHI	10	Unmodified	_ERKLKDAVHI_					0	0	0		nc|ENSG00000165521|Q05BV3|EML5;ENSG00000165521|ENST00000554922|EML5;nc|ENSG00000165521|Q05BV3-4|EML5;nc|ENSG00000165521|Q05BV3-2|EML5	nc|ENSG00000165521|Q05BV3|EML5	nc|ENSG00000165521|Q05BV3|EML5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8589477539062	2	604.859129	1207.70371	0.082073	4.9642E-05	-1.0653	-0.00064433	-0.98318	-0.00059469	604.8584757159402	82.084	1.3276	82.558	81.718	83.045	0.47383					56	29	2	0	0	0	0.81117	1	9462	9462		19.997	0	1	3105600			7825	6090	5475	5481	9024	9024					0.10816170071393572
ERKLRGVARI	10	Unmodified	_ERKLRGVARI_					0	0	0			REV__nc|ENSG00000168958|Q9GZY8|MFF	REV__nc|ENSG00000168958|Q9GZY8|MFF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.3792114257812	2	599.380563	1196.74657	-0.54345	-0.00032574	-0.29189	-0.00017495	-0.83534	-0.00050069	599.3802252506414	103.57	3.0198	103.57	103.18	106.2	-0.0035782					175	72	5	0	0	0	0.85934	4	11207	11123;11159;11171;11207		35.618	7.364	1	11998000	+		7826	30018	5476	5482	9025;9026;9027;9028	9028					0.15606984919463684
ERKLRGVARI	10	Unmodified	_ERKLRGVARI_					0	0	0			REV__nc|ENSG00000168958|Q9GZY8|MFF	REV__nc|ENSG00000168958|Q9GZY8|MFF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.3792724609375	2	599.380563	1196.74657	3.2712	0.0019607	-4.2058	-0.0025209	-0.93465	-0.00056021	599.3778849492661	103.51	3.7036	103.46	103.04	106.74	-0.043755					239	88	5	0	0	0	0.85934	5	11421	11337;11361;11397;11421;11457		35.618	7.736	1	11967000	+		7827	30018	5476	5482	9029;9030;9031;9032;9033	9032					0.15606984919463684
ERKLRGVARI	10	Unmodified	_ERKLRGVARI_					0	0	0			REV__nc|ENSG00000168958|Q9GZY8|MFF	REV__nc|ENSG00000168958|Q9GZY8|MFF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.3795166015625	2	599.380563	1196.74657	-0.35766	-0.00021438	-0.43116	-0.00025843	-0.78882	-0.0004728	599.3801693786043	103.37	3.7428	103.41	103.03	106.77	0.041481					250	89	5	0	0	0	0.85934	4	11293	11281;11293;11317;11328		35.618	6.4482	1	13277000	+		7828	30018	5476	5482	9034;9035;9036;9037	9035					0.15606984919463684
ERKLRGVARI	10	Unmodified	_ERKLRGVARI_					0	0	0			REV__nc|ENSG00000168958|Q9GZY8|MFF	REV__nc|ENSG00000168958|Q9GZY8|MFF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3794555664062	2	599.380563	1196.74657	0.89992	0.0005394	-1.6462	-0.00098668	-0.74624	-0.00044728	599.379410135585	103.38	3.1227	103.51	103.01	106.14	0.12621					246	78	5	0	0	0	0.74274	5	10992	10896;10968;10992;11028;11054		42.396	11.892	1	20012000	+		7829	30018	5476	5482	9038;9039;9040;9041;9042	9040					0.15606984919463684
ERKLRGVARI	10	Unmodified	_ERKLRGVARI_					0	0	0			REV__nc|ENSG00000168958|Q9GZY8|MFF	REV__nc|ENSG00000168958|Q9GZY8|MFF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.380615234375	2	599.380563	1196.74657	-1.2913	-0.00077396	0.50428	0.00030226	-0.78699	-0.0004717	599.3806932084216	103.36	2.8938	103.47	103.07	105.96	0.11494					245	72	6	0	0	0	0.8608	2	10889	10889;10996		34.173	7.4796	1	20299000	+		7830	30018	5476	5482	9043;9044	9043					0.15606984919463684
ERKPKKSA	8	Unmodified	_ERKPKKSA_					0	0	0			REV__nc|ENSG00000102858|O60291|MGRN1	REV__nc|ENSG00000102858|O60291|MGRN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2882385253906	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.90523	1	12940	12940		40.778	12.896	1	3080300	+		7831	17363	5477	5483	9045	9045					0.0874858239999412
ERKQLPKPPA	10	Unmodified	_ERKQLPKPPA_					0	0	0			REV__ENST00000222718.6_1_7:27142143-27142227:-|nuORF	REV__ENST00000222718.6_1_7:27142143-27142227:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3512573242188	2	582.348397	1162.68224	5.2263	0.0030435	4.1643	0.0024251	9.3906	0.0054686	582.3505348366207	111.48	0.29791	111.53	111.39	111.69	0.049088					12	10	2	0	0	0	0.86471	1	13533	13533		30.318	1.1682	1	314050	+		7832	24165	5478	5484	9046	9046					0.10740785042685275
ERKRHRERDYR	11	Unmodified	_ERKRHRERDYR_					0	0	0			REV__ENSG00000183287|ENST00000439986|CCBE1	REV__ENSG00000183287|ENST00000439986|CCBE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	534.2900390625	3	534.289094	1599.84545	0.12819	6.8489E-05	1.1547	0.00061694	1.2829	0.00068543	534.2895294016255	32.861	1.1357	32.859	32.446	33.581	-0.0016365					64	26	4	0	0	0	0.8498	1	1902	1902		6.001	0.58812	1	199350	+		7833	22591	5479	5485	9047	9047					0.06952356146416605
ERKRRKAG	8	Unmodified	_ERKRRKAG_					0	0	0		ENSG00000181418|ENST00000421952|DDN	ENSG00000181418|ENST00000421952|DDN	ENSG00000181418|ENST00000421952|DDN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.3063049316406	2	500.809774	999.604994	-0.0092853	-4.6502E-06	-4.0398	-0.0020232	-4.0491	-0.0020278	500.80767787598467	16.609	0.52898	16.122	15.959	16.488	-0.48718					20	11	3	0	0	0	0.4196	1	161	161		68.485	5.5063	1	1077000			7834	7389	5480	5486	9048	9048					0.10517611616990052
ERKVDQKPKS	10	Unmodified	_ERKVDQKPKS_					0	0	0		ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	ENSG00000118412|ENST00000551025|CASP8AP2	ENSG00000118412|ENST00000551025|CASP8AP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5643615722656	3	405.566571	1213.67788	-1.8603	-0.00075448	-2.5615	-0.0010388	-4.4218	-0.0017933	405.5653949658049	63.143	1.4987	63.257	62.721	64.22	0.11388					139	74	3	0	0	0	0.86297	1	5536	5536		32.034	4.4804	1	273590			7835	3028	5481	5487	9049	9049					0.0795927582908007
ERLLTWTV	8	Unmodified	_ERLLTWTV_					0	0	0			REV__ENST00000354377.7_1_15:90895613-90902094:+|nuORF	REV__ENST00000354377.7_1_15:90895613-90902094:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2681579589844	2	509.290017	1016.56548	0.62134	0.00031644	-3.9595	-0.0020165	-3.3381	-0.0017001	509.2879910353956	16.992	0.33797	16.509	16.241	16.579	-0.48256					11	7	2	0	0	0	0.4196	1	204	204		12.959	0	1	64319	+		7836	25353	5482	5488	9050	9050					0.05786046822879598
ERLPDRELI	9	Unmodified	_ERLPDRELI_					0	0	0			REV__nc|ENSG00000116580|Q3T8J9-3|GON4L	REV__nc|ENSG00000116580|Q3T8J9-3|GON4L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.816162109375	2	570.822212	1139.62987	-0.23349	-0.00013328	3.926	0.0022411	3.6925	0.0021078	570.8242504843668	61.573	0.86258	61.603	61.338	62.201	0.029575					86	37	3	0	0	0	0.58668	1	5765	5765		47.657	1.2006	1	572170	+		7837	18204	5483	5489	9051	9051					0.06564201909031908
ERLPQYPQGS	10	Unmodified	_ERLPQYPQGS_					0	0	0			REV__ENST00000547003.1_1_12:49916566-49919899:+|nuORF	REV__ENST00000547003.1_1_12:49916566-49919899:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.7984008789062	2	587.796195	1173.57784	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.245	1	18.615	18.115	19.115	-0.6296								0	0	0	0.45132	1	495	495		31.634	0	1		+		7838	18538	5484	5490	9052	9052					-0.00200961504742736
ERLREGALVV	10	Unmodified	_ERLREGALVV_					0	0	0			REV__ENSG00000276043|ENST00000650932|UHRF1	REV__ENSG00000276043|ENST00000650932|UHRF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.1486206054688	2	571.33803	1140.66151	0.40075	0.00022896	0.44525	0.00025439	0.846	0.00048335	571.3382957238542	36.25	0.65181	36.531	36.115	36.767	0.28173					26	15	2	0	0	0	0.37624	1	2806	2806		47.657	20.964	1	141030	+		7839	15714	5485	5491	9053	9053					0.09680194662973918
ERLRKEQRRMK	11	Unmodified	_ERLRKEQRRMK_					0	0	0			REV__nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2	REV__nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.63409423828125	3	510.631692	1528.87325	4.1352	0.0021116	2.9141	0.0014881	7.0494	0.0035996	510.96644639342924	104.18	2.2061	104.41	103.8	106.01	0.22783					165	53	5	0	0	0	0.81892	1	12793	12793		8.0344	2.3356	1	454800	+		7840	30039	5486	5492	9054	9054					0.12996543082249445
ERLSDTVN	8	Unmodified	_ERLSDTVN_					0	0	0			REV__ENSG00000144909|ENST00000296220|OSBPL11	REV__ENSG00000144909|ENST00000296220|OSBPL11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.23394775390625	2	467.235439	932.456324	-1.043	-0.00048731	-3.3102	-0.0015467	-4.3532	-0.002034	467.23370254393717	68.31	1.3377	68.343	68.023	69.361	0.033005					128	53	3	0	0	0	0.89291	1	6573	6573		36.447	0	1	1288900	+		7841	19918	5487	5493	9055	9055					-0.012605838672470782
ERLVAVLM	8	Unmodified	_ERLVAVLM_					0	0	0			REV__ENSG00000011083|ENST00000230671|SLC6A7	REV__ENSG00000011083|ENST00000230671|SLC6A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774963378906	2	465.775688	929.536823	-0.087401	-4.0709E-05	4.1075	0.0019132	4.0201	0.0018725	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.91005	1	8215	8215		42.474	4.6629	1	1330000	+		7842	16175	5488	5494	9056	9056					0.06923605922099796
ERLYEMILKRK	11	Unmodified	_ERLYEMILKRK_					0	0	0		ENSG00000175906|ENST00000320033|ARL4D	ENSG00000175906|ENST00000320033|ARL4D	ENSG00000175906|ENST00000320033|ARL4D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.6208190917969	3	493.621911	1477.8439	0.40491	0.00019987	-2.0757	-0.0010246	-1.6708	-0.00082474	493.62080407624626	30.653	0.85216	30.651	30.205	31.057	-0.0022526					107	42	3	0	0	0	0.77511	1	1380	1380		16.53	0.52308	1	258510			7843	7044	5489	5495	9057	9057					0.12409586013427543
ERMKRLAL	8	Unmodified	_ERMKRLAL_					0	0	0			REV__ENSG00000130159|ENST00000270517|ECSIT	REV__ENSG00000130159|ENST00000270517|ECSIT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.80572509765625	2	508.805311	1015.59607	0.71177	0.00036215	3.9714	0.0020207	4.6831	0.0023828	508.807249712291	89.741	1.2834	89.893	89.353	90.637	0.1519					55	29	2	0	0	0	0.82464	1	8997	8997		21.702	2.3424	1	1480000	+		7844	18851	5490	5496	9058	9058					0.08889501936289435
ERNGRKLAAAI	11	Unmodified	_ERNGRKLAAAI_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.23956298828125	3	400.238678	1197.6942	2.8937	0.0011582	-2.8811	-0.0011531	0.012636	5.0576E-06	400.2374574429666	20.145	0.39679	20.075	19.923	20.32	-0.070013					24	16	2	0	0	0	0.72892	1	487	487		26.75	0.68632	1	50326	+		7845	29671	5491	5497	9059	9059					0.10326401785846429
ERNGRKLAAAI	11	Unmodified	_ERNGRKLAAAI_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	400.238678	1197.6942	0.88651	0.00035482	-0.63737	-0.0002551	0.24914	9.9715E-05	400.23831201207383	19.88	0.38884	19.951	19.723	20.112	0.071127	-0.087967	0.00026347	NaN	26.75	27	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19002	+		7846	29671	5491	5497							0.10326401785846429
ERNGRKLAAAI	11	Unmodified	_ERNGRKLAAAI_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	400.238678	1197.6942	-0.39777	-0.0001592	0.95164	0.00038088	0.55386	0.00022168	400.239074040512	20.161	0.35224	20.091	19.913	20.266	-0.069735	0.051719	0.0021714	NaN	26.75	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42104	+		7847	29671	5491	5497							0.10326401785846429
ERNGRKLAAAI	11	Unmodified	_ERNGRKLAAAI_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	400.238678	1197.6942	2.8937	0.0011582	-2.8811	-0.0011531	0.012636	5.0576E-06	400.2374574429666	20.145	0.39679	20.075	19.923	20.32	-0.070013	0.036248	-0.0024306	NaN	26.75	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50326	+		7848	29671	5491	5497							0.10326401785846429
ERNIVGAI	8	Unmodified	_ERNIVGAI_					0	0	0			REV__ENSG00000105929|ENST00000310018|ATP6V0A4	REV__ENSG00000105929|ENST00000310018|ATP6V0A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.2545471191406	2	436.253434	870.492316	2.1857	0.00095352	1.2941	0.00056457	3.4798	0.0015181	436.2538705634068	114.35	2.7328	114.38	114.11	116.84	0.026459					117	82	2	0	0	0	0.8347	1	12608	12608		23.042	1.0826	1	78531	+		7849	17582	5492	5498	9060	9060					0.051889181002820806
ERNVRLPG	8	Unmodified	_ERNVRLPG_					0	0	0		chr12:50001252-50001941|39|11.67|0.6|4.29|-|0|TE_info:AluSq2,AluSq2_dup40417,Alu,SINE,donor,+,50001941,50002093|RACGAP1,None|1	chr12:50001252-50001941|39|11.67|0.6|4.29|-|0|TE_info:AluSq2,AluSq2_dup40417,Alu,SINE,donor,+,50001941,50002093|RACGAP1,None|1	chr12:50001252-50001941|39|11.67|0.6|4.29|-|0|TE_info:AluSq2,AluSq2_dup40417,Alu,SINE,donor,+,50001941,50002093|RACGAP1,None|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7691650390625	2	470.769783	939.525013	-1.5754	-0.00074164	0.39518	0.00018604	-1.1802	-0.0005556	470.7698262584641	54.969	1.6886	54.969	54.144	55.833	0					124	54	3	0	0	0	0.90523	1	4659	4659		40.778	0	1	1398900			7850	131	5493	5499	9061	9061					0.05283125223149909
ERPLSPKA	8	Unmodified	_ERPLSPKA_					0	0	0		nc|ENSG00000129675|Q15052-2|ARHGEF6;ENSG00000129675|ENST00000250617|ARHGEF6	nc|ENSG00000129675|Q15052-2|ARHGEF6	nc|ENSG00000129675|Q15052-2|ARHGEF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2607421875	2	449.261259	896.507966	-0.43537	-0.0001956	-1.0183	-0.0004575	-1.4537	-0.00065309	449.26067669224085	66.168	1.0089	66.554	66.153	67.162	0.38581					54	26	3	0	0	0	0.84341	1	7238	7238		24.203	0	1	1011600			7851	3601	5494	5500	9062	9062					0.055572046173210765
ERQLKAARYT	10	Unmodified	_ERQLKAARYT_					0	0	0			REV__ENSG00000066279|ENST00000367409|ASPM	REV__ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.345703125	2	618.346386	1234.67822	0.55169	0.00034113	-1.3321	-0.00082372	-0.78044	-0.00048258	618.3454418699644	97.724	3.0702	97.772	96.827	99.897	0.048157					199	71	4	0	0	0	0.78666	1	10451	10451		40.058	7.2458	1	831610	+		7852	16520	5495	5501	9063	9063					0.07026695548938733
ERQQLLVGHG	10	Unmodified	_ERQQLLVGHG_					0	0	0			REV__ENST00000278671.9_1_11:71810270-71814295:-|nuORF	REV__ENST00000278671.9_1_11:71810270-71814295:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.8131103515625	2	568.812179	1135.60981	0.48499	0.00027587	-1.1002	-0.00062581	-0.61522	-0.00034994	568.8099909257696	58.062	0.64638	58.173	57.918	58.565	0.11027					64	29	3	0	0	0	0.8608	1	4947	4947		34.173	8.5985	1	117580	+		7853	24597	5496	5502	9064	9064					0.04742450969092715
ERQQVYLLGQ	10	Unmodified	_ERQQVYLLGQ_					0	0	0			REV__ENST00000567420.1_1_16:15141297-15141917:-|nuORF	REV__ENST00000567420.1_1_16:15141297-15141917:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	617.3356323242188	2	617.332944	1232.65134	0.46482	0.00028695	3.4497	0.0021296	3.9145	0.0024166	617.335092488195	79.707	0.88818	80.257	79.956	80.845	0.54945					42	20	3	0	0	0	0.19302	1	9156	9156		87.696	2.5356	1	1749800	+		7854	20522	5497	5503	9065	9065					0.04431586937744214
ERRARRISA	9	Unmodified	_ERRARRISA_					0	0	0		ENSG00000047644|ENST00000380861|WWC3	ENSG00000047644|ENST00000380861|WWC3	ENSG00000047644|ENST00000380861|WWC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	557.8291015625	2	557.831237	1113.64792	-1.4267	-0.00079583	0.74966	0.00041818	-0.677	-0.00037765	557.8315827372627	100.97	1.6229	101.12	100.62	102.24	0.15505					78	39	3	0	0	0	0.7932	1	10533	10533		25.574	2.0514	1	900390			7855	966	5498	5504	9066	9066					0.09564381674408651
ERRFKDRRRRD	11	Unmodified	_ERRFKDRRRRD_					0	0	0			REV__nc|ENSG00000087087|Q9BXP5-5|SRRT	REV__nc|ENSG00000087087|Q9BXP5-5|SRRT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.6338500976562	3	530.632972	1588.87709	-0.15942	-8.4591E-05	1.005	0.00053326	0.84554	0.00044867	530.633588179504	38.167	0.5439	38.183	37.956	38.5	0.016563					32	15	3	0	0	0	0.79716	1	2240	2240		11.932	3.1331	1	155150	+		7856	16922	5499	5505	9067	9067					0.1062034890032919
ERRFKDRRRRD	11	Unmodified	_ERRFKDRRRRD_					0	0	0			REV__nc|ENSG00000087087|Q9BXP5-5|SRRT	REV__nc|ENSG00000087087|Q9BXP5-5|SRRT	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	530.632972	1588.87709	0.76366	0.00040523	-1.6044	-0.00085137	-0.84078	-0.00044615	530.6318780723519	37.534	0.2366	37.847	37.705	37.942	0.31312	-0.15092	-0.0038822	NaN	11.932	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178020	+		7857	16922	5499	5505							0.1062034890032919
ERRFKDRRRRD	11	Unmodified	_ERRFKDRRRRD_					0	0	0			REV__nc|ENSG00000087087|Q9BXP5-5|SRRT	REV__nc|ENSG00000087087|Q9BXP5-5|SRRT	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	530.632972	1588.87709	0.52439	0.00027826	0.44121	0.00023412	0.9656	0.00051238	530.6330440181358	37.394	0.27879	37.88	37.747	38.025	0.48581	-0.11801	-0.00062572	NaN	11.932	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139770	+		7858	16922	5499	5505							0.1062034890032919
ERRFVTKLLE	10	Unmodified	_ERRFVTKLLE_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	645.88427734375	2	645.880062	1289.74557	1.6037	0.0010358	3.8348	0.0024768	5.4385	0.0035126	645.8824480849914	105.51	1.1194	105.67	105	106.12	0.15924					80	28	3	0	0	0	0.86549	1	11235	11235		24.519	1.9395	1	2558100			7859	3260	5500	5506	9068	9068					0.11228725759883673
ERRKKQQWEIM	11	Unmodified	_ERRKKQQWEIM_					0	0	0		nc|ENSG00000130363|Q86UC2|RSPH3;nc|ENSG00000130363|Q86UC2-2|RSPH3;ENSG00000130363|ENST00000367069|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.275390625	3	511.276915	1530.80892	-1.6097	-0.00082298	-1.6319	-0.00083433	-3.2415	-0.0016573	511.27590022322084	37.797	1.076	37.797	37.483	38.559	0					62	26	4	0	0	0	0.79945	1	2296	2296		11.455	0.45641	1	366100			7860	14904	5501	5507	9069	9069					0.06474343205491095
ERRLLRVRR	9	Unmodified	_ERRLLRVRR_					0	0	0			REV__ENSG00000096070|ENST00000357641|BRPF3	REV__ENSG00000096070|ENST00000357641|BRPF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.9394226074219	3	418.605695	1252.79525	-0.80519	-0.00033706	-1.3317	-0.00055746	-2.1369	-0.00089452	418.93952643387223	48.929	2.0864	48.904	47.856	49.942	-0.025105					77	48	2	0	0	0	0.7932	1	4156	4156		19.104	1.2704	1	118610	+		7861	17073	5502	5508	9070	9070					0.17896898279218476
ERRPLPVRP	9	Unmodified	_ERRPLPVRP_					0	0	0			REV__ENSG00000156030|ENST00000423556|MIDEAS	REV__ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.34033203125	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.78983	1	11096	11096		27.882	1.1893	1	81463000	+		7862	20463	5503	5509	9071	9071					0.11267337965318802
ERRRHKKRIQR	11	Unmodified	_ERRRHKKRIQR_					0	0	0		ENST00000461933.1_1_3:169684610-169686205:+|nuORF	ENST00000461933.1_1_3:169684610-169686205:+|nuORF	ENST00000461933.1_1_3:169684610-169686205:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	521.991943359375	3	521.657341	1561.95019	-1.2934	-0.0006747	0.7323	0.00038201	-0.56108	-0.00029269	521.6576101839959	55.646	1.2053	55.646	55.208	56.414	0					123	38	5	0	0	0	0.88916	1	4702	4702		3.4087	0	1	828200			7863	12034	5504	5510	9072	9072					0.19169522413631057
ERRRHKKRIQR	11	Unmodified	_ERRRHKKRIQR_					0	0	0		ENST00000461933.1_1_3:169684610-169686205:+|nuORF	ENST00000461933.1_1_3:169684610-169686205:+|nuORF	ENST00000461933.1_1_3:169684610-169686205:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	521.65673828125	3	521.657341	1561.95019	-0.024987	-1.3035E-05	-0.63781	-0.00033272	-0.6628	-0.00034575	521.9913051099392	55.372	1.2186	55.345	54.89	56.109	-0.027279					135	32	5	0	0	0	0.81021	2	5080	5080;5096		9.2118	3.2108	1	1514200			7864	12034	5504	5510	9073;9074	9073					0.19169522413631057
ERRRHKKRIQR	11	Unmodified	_ERRRHKKRIQR_					0	0	0		ENST00000461933.1_1_3:169684610-169686205:+|nuORF	ENST00000461933.1_1_3:169684610-169686205:+|nuORF	ENST00000461933.1_1_3:169684610-169686205:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	521.9924926757812	3	521.657341	1561.95019	-0.25952	-0.00013538	-0.11933	-6.2249E-05	-0.37884	-0.00019763	521.6571947989914	55.231	1.5244	55.294	54.783	56.307	0.063725					161	52	4	0	0	0	0.81219	1	4564	4564		8.7993	0.39205	1	1935400			7865	12034	5504	5510	9075	9075					0.19169522413631057
ERRRHKKRIQR	11	Unmodified	_ERRRHKKRIQR_					0	0	0		ENST00000461933.1_1_3:169684610-169686205:+|nuORF	ENST00000461933.1_1_3:169684610-169686205:+|nuORF	ENST00000461933.1_1_3:169684610-169686205:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	521.656005859375	3	521.657341	1561.95019	0.41338	0.00021564	-0.89582	-0.00046731	-0.48244	-0.00025167	521.9911888530377	55.139	1.4097	55.23	54.807	56.216	0.091167					167	45	5	0	0	0	0.85439	1	4654	4654		5.6988	0.55642	1	1954200			7866	12034	5504	5510	9076	9076					0.19169522413631057
ERRSMSPC	8	Unmodified	_ERRSMSPC_					0	0	0		ENST00000369774.8_3_10:105376987-105386893:-|nuORF	REV__ENST00000486765.5_1_1:3806526-3811957:-|nuORF	REV__ENST00000486765.5_1_1:3806526-3811957:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.2177734375	2	483.218211	964.42187	-1.3332	-0.00064422	1.7673	0.00085398	0.43409	0.00020976	483.21893271772785	91.68	1.3061	92.143	91.352	92.658	0.46249					56	30	2	0	0	0	0.86288	1	10932	10932		26.796	0	1	349990			7867	23412	5505	5511	9077	9077					-0.06176446551330628
ERRSRRAGGAV	11	Unmodified	_ERRSRRAGGAV_					0	0	0			REV__ENST00000477994.1_1_10:104183924-104192326:-|nuORF	REV__ENST00000477994.1_1_10:104183924-104192326:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.56488037109375	3	405.565676	1213.6752	-1.5858	-0.00064316	-0.80581	-0.00032681	-2.3916	-0.00096997	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.732	1	5309	5309		26.063	0.17167	1	181560	+		7868	27369	5506	5512	9078	9078					0.0769086521479494
ERTRKRNS	8	Unmodified	_ERTRKRNS_					0	0	0			REV__ENSG00000132801|ENST00000255152|ZSWIM3	REV__ENSG00000132801|ENST00000255152|ZSWIM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7938232421875	2	523.794321	1045.57409	1.1929	0.00062481	-2.0071	-0.0010513	-0.81427	-0.00042651	523.7931742755334	19.706	1.4854	19.236	18.928	20.414	-0.46967					77	32	3	0	0	0	0.82658	1	607	607		21.96	1.013	1	1002100	+		7869	19034	5507	5513	9079	9079					0.05312413512069725
ERVAAKVAAS	10	Unmodified	_ERVAAKVAAS_					0	0	0			REV__ENST00000548184.1_1_12:57674304-57677729:-|nuORF	REV__ENST00000548184.1_1_12:57674304-57677729:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29052734375	2	501.290548	1000.56654	0.16565	8.304E-05	-0.064258	-3.2212E-05	0.10139	5.0828E-05	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.8545	1	9728	9728		36.447	4.9169	1	2717900	+		7870	28564	5508	5514	9080	9080					0.06628261191792717
ERVKNMLY	8	Unmodified	_ERVKNMLY_					0	0	0		ENSG00000109181|ENST00000265403|UGT2B10	ENSG00000109181|ENST00000265403|UGT2B10	ENSG00000109181|ENST00000265403|UGT2B10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.776611328125	2	526.781502	1051.54845	-0.45265	-0.00023845	-2.5611	-0.0013492	-3.0138	-0.0015876	526.779998742406	62.534	1.519	62.562	62.243	63.762	0.028133					119	70	3	0	0	0	0.89962	1	5890	5890		38.806	0	1	655170			7871	2454	5509	5515	9081	9081					0.02473802945451098
ERVPKKEVKVN	11	Unmodified	_ERVPKKEVKVN_					0	0	0		ENST00000502972.1_1_4:48859213-48862776:+|nuORF;ENSG00000109180|ENST00000264312|OCIAD1	ENST00000502972.1_1_4:48859213-48862776:+|nuORF	ENST00000502972.1_1_4:48859213-48862776:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.60113525390625	3	442.601504	1324.78268	1.7929	0.00079355	-2.9372	-0.0013	-1.1443	-0.00050647	442.6001215105029	103.71	1.4704	103.75	103.32	104.79	0.041481					92	35	4	0	0	0	0.76892	1	11301	11301		17.833	0	1	665090			7872	2453	5510	5516	9082	9082					0.13328397305645012
ERVQRCIST	9	Unmodified	_ERVQRCIST_					0	0	0			REV__ENST00000578441.5_1_17:8132592-8134736:-|nuORF	REV__ENST00000578441.5_1_17:8132592-8134736:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.9135131835938	2	546.28494	1090.55533	1.9144	0.0010458	1.8182	0.00099323	3.7325	0.002039	546.7877105275027	26.568	0.58681	26.227	25.962	26.549	-0.34035					18	12	2	0	0	0	0.20789	1	1468	1468		45.972	16.823	1	64030	+		7873	29026	5511	5517	9083	9083					0.013671158260194716
ERWEVARERRL	11	Unmodified	_ERWEVARERRL_					0	0	0			REV__ENSG00000177494|ENST00000317012|ZBED2	REV__ENSG00000177494|ENST00000317012|ZBED2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.6108703613281	3	500.611174	1498.81169	-0.58369	-0.0002922	1.2973	0.00064943	0.71359	0.00035723	500.6117688086528	48.713	0.63323	48.736	48.534	49.168	0.02227					37	15	3	0	0	0	0.75779	1	3734	3734		20.315	0	1	204020	+		7874	22212	5512	5518	9084	9084					0.08223934654643017
ERWEVARERRL	11	Unmodified	_ERWEVARERRL_					0	0	0			REV__ENSG00000177494|ENST00000317012|ZBED2	REV__ENSG00000177494|ENST00000317012|ZBED2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.6112060546875	3	500.611174	1498.81169	-0.21935	-0.00010981	1.3054	0.00065349	1.086	0.00054368	500.6117698827683	48.784	0.70604	48.69	48.404	49.11	-0.093178					39	16	3	0	0	0	0.77511	1	3731	3731		16.53	3.0219	1	146250	+		7875	22212	5512	5518	9085	9085					0.08223934654643017
ERWEVARERRL	11	Unmodified	_ERWEVARERRL_					0	0	0			REV__ENSG00000177494|ENST00000317012|ZBED2	REV__ENSG00000177494|ENST00000317012|ZBED2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	500.611174	1498.81169	-0.66492	-0.00033287	2.0582	0.0010304	1.3933	0.00069749	500.61208122645127	48.639	0.43762	48.614	48.4	48.837	-0.025116	-0.10701	0.0010619	NaN	20.315	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57935	+		7876	22212	5512	5518							0.08223934654643017
ERWEVARERRL	11	Unmodified	_ERWEVARERRL_					0	0	0			REV__ENSG00000177494|ENST00000317012|ZBED2	REV__ENSG00000177494|ENST00000317012|ZBED2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	500.611174	1498.81169	-1.0793	-0.00054029	2.0864	0.0010445	1.0072	0.0005042	500.6121886252103	48.727	0.39468	48.727	48.486	48.881	0.00016785	0.0065785	0.0011043	NaN	20.315	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67264	+		7877	22212	5512	5518							0.08223934654643017
ERWEVARERRL	11	Unmodified	_ERWEVARERRL_					0	0	0			REV__ENSG00000177494|ENST00000317012|ZBED2	REV__ENSG00000177494|ENST00000317012|ZBED2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	500.611174	1498.81169	-0.58369	-0.0002922	1.2973	0.00064943	0.71359	0.00035723	500.6117688086528	48.713	0.63323	48.736	48.534	49.168	0.02227	0.014784	-8.0866E-05	NaN	20.315	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	204020	+		7878	22212	5512	5518							0.08223934654643017
ERWEVARERRL	11	Unmodified	_ERWEVARERRL_					0	0	0			REV__ENSG00000177494|ENST00000317012|ZBED2	REV__ENSG00000177494|ENST00000317012|ZBED2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	500.611174	1498.81169	0.33515	0.00016778	0.69614	0.0003485	1.0313	0.00051628	500.61150702414267	48.799	0.61599	48.837	48.554	49.17	0.037731	0.116	-0.00098366	NaN	20.315	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176550	+		7879	22212	5512	5518							0.08223934654643017
ERWEVARERRL	11	Unmodified	_ERWEVARERRL_					0	0	0			REV__ENSG00000177494|ENST00000317012|ZBED2	REV__ENSG00000177494|ENST00000317012|ZBED2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	500.611174	1498.81169	-0.21935	-0.00010981	1.3054	0.00065349	1.086	0.00054368	500.6117698827683	48.784	0.70604	48.69	48.404	49.11	-0.093178	-0.030349	-6.8674E-05	NaN	20.315	39	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146250	+		7880	22212	5512	5518							0.08223934654643017
ERYQKQLVLP	10	Unmodified	_ERYQKQLVLP_					0	0	0			REV__chr18:6873775-6882137|36|15.11|0.45|5.07|+|ENST00000579689|ARHGAP28,ARHGAP28	REV__chr18:6873775-6882137|36|15.11|0.45|5.07|+|ENST00000579689|ARHGAP28,ARHGAP28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	637.3681640625	2	637.366787	1272.71902	2.7628	0.0017609	3.0551	0.0019472	5.8179	0.0037081	637.3686513642523	105.87	2.2422	105.84	105.02	107.26	-0.03714					153	52	4	0	0	0	0.8651	1	11730	11730		25.574	2.0514	1	1640000	+		7881	15676	5513	5519	9086	9086					0.09357036868550495
ESACGQRVL	9	Unmodified	_ESACGQRVL_					0	0	0			REV__ENSG00000010818|ENST00000367603|HIVEP2	REV__ENSG00000010818|ENST00000367603|HIVEP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.7393798828125	2	481.739834	961.465115	-0.23053	-0.00011106	-3.5863	-0.0017277	-3.8169	-0.0018387	481.7381215655853	30.725	0.56016	30.678	30.497	31.057	-0.047064					23	14	2	0	0	0	0.51307	1	1707	1707		51.335	1.3109	1	48021	+		7882	16173	5514	5520	9087	9087					-0.017159335024075517
ESAFSLRLF	9	Unmodified	_ESAFSLRLF_					0	0	0			REV__ENSG00000103994|ENST00000564754|ZNF106	REV__ENSG00000103994|ENST00000564754|ZNF106	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2528686523438	2	535.287474	1068.5604	-0.38496	-0.00020607	2.8829	0.0015432	2.4979	0.0013371	535.2883515173888	84.519	1.0501	84.967	84.266	85.316	0.44736					34	25	2	0	0	0	0.20789	1	9770	9770		37.159	3.6435	1	154250	+		7883	17431	5515	5521	9088	9088					0.028857429602794582
ESAFSLRLF	9	Unmodified	_ESAFSLRLF_					0	0	0			REV__ENSG00000103994|ENST00000564754|ZNF106	REV__ENSG00000103994|ENST00000564754|ZNF106	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	535.287474	1068.5604	-0.35185	-0.00018834	1.6379	0.00087673	1.286	0.00068839	535.2880245287031	84.524	1.0055	84.96	84.299	85.304	0.43537	-0.0034736	-0.00064583	NaN	37.159	40	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189050	+		7884	17431	5515	5521							0.028857429602794582
ESAPMLWI	8	Oxidation (M)	_ESAPM(Oxidation (M))LWI_		ESAPM(1)LWI		ESAPM(45)LWI	0	0	1			REV__nc|ENSG00000138346|P51530-4|DNA2	REV__nc|ENSG00000138346|P51530-4|DNA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.7353820800781	2	481.736228	961.457904	-0.23053	-0.00011106	3.8976	0.0018776	3.6671	0.0017666	481.7381215655853	30.725	0.56016	30.678	30.497	31.057	-0.047064					23	14	2	0	0	0	0.9159	1	1692	1692		44.531	9.3304	1	48021	+		7885	19459	5516	5522	9089	9089		288			-0.024366661028238923
ESARRQQLV	9	Unmodified	_ESARRQQLV_					0	0	0		nc|ENSG00000019144|Q86UU1-2|PHLDB1;ENSG00000019144|ENST00000600882|PHLDB1;ENST00000526537.2_1_11:118518618-118527530:+|nuORF;ENST00000530994.5_1_11:118515264-118527530:+|nuORF;ENST00000524713.5_1_11:118512334-118527530:+|nuORF;ENST00000532517.5_1_11:118498004-118527530:+|nuORF	nc|ENSG00000019144|Q86UU1-2|PHLDB1	nc|ENSG00000019144|Q86UU1-2|PHLDB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.8009643554688	2	543.804354	1085.59415	0.065213	3.5463E-05	-0.0046178	-2.5112E-06	0.060595	3.2952E-05	543.8042653951544	16.453	0.22968	15.855	15.74	15.97	-0.59873					9	4	3	0	0	0	0.78058	1	143	143		30.504	1.3541	1	121320			7886	836	5517	5523	9090	9090					0.054781644520289774
ESARVLLR	8	Unmodified	_ESARVLLR_					0	0	0		ENSG00000076513|ENST00000261739|ANKRD13A	ENSG00000076513|ENST00000261739|ANKRD13A	ENSG00000076513|ENST00000261739|ANKRD13A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2878112792969	2	472.287808	942.561064	-0.024015	-1.1342E-05	0.7135	0.00033698	0.68949	0.00032564	472.2881848861931	99.149	1.6194	99.196	98.809	100.43	0.047531					85	37	3	0	0	0	0.86288	1	10652	10652		26.796	6.3143	1	514560			7887	1358	5518	5524	9091	9091					0.0874858239999412
ESASAMLV	8	Unmodified	_ESASAMLV_					0	0	0			REV__ENST00000605833.1_1_10:17271579-17271768:-|nuORF	REV__ENST00000605833.1_1_10:17271579-17271768:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.5183410644531	2	404.199479	806.384405	1.7083	0.00069048	0.93424	0.00037762	2.6425	0.0010681	404.1997668463672	24.575	0.26487	24.061	23.88	24.144	-0.51365					8	5	2	0	0	0	0.4196	1	1211	1211		8.2313	0	1	17022	+		7888	29364	5519	5525	9092	9092					-0.026532145453188605
ESASGRGLW	9	Unmodified	_ESASGRGLW_					0	0	0		ENST00000550375.1_1_14:105714398-105714842:-|nuORF	ENST00000550375.1_1_14:105714398-105714842:-|nuORF	ENST00000550375.1_1_14:105714398-105714842:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.73663330078125	2	481.738148	961.461744	0.22496	0.00010837	-0.18466	-8.8958E-05	0.040298	1.9413E-05	481.7379494268744	30.686	0.62495	30.711	30.546	31.171	0.025013					29	18	2	0	0	0	0.28163	1	1611	1611		66.429	11.653	1	34508			7889	13653	5520	5526	9093	9093					-0.020528602847662114
ESCNSSSEN	9	Unmodified	_ESCNSSSEN_					0	0	0		ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A	ENSG00000168356|ENST00000302328|SCN11A	ENSG00000168356|ENST00000302328|SCN11A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.6640625	2	478.666728	955.318904	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.7	1	71.248	70.748	71.748	0.54756								0	0	0	0.32758	1	7876	7876		20.947	0.95016	1				7890	6395	5521	5527	9094	9094					-0.16054280528965137
ESCNSSSEN	9	Unmodified	_ESCNSSSEN_					0	0	0		ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A	ENSG00000168356|ENST00000302328|SCN11A	ENSG00000168356|ENST00000302328|SCN11A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.6642761230469	2	478.666728	955.318904	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.859	1	71.407	70.907	71.907	0.54756								0	0	0	0.31437	1	7899	7899		25.574	1.3713	1				7891	6395	5521	5527	9095	9095					-0.16054280528965137
ESDINSVRY	9	Unmodified	_ESDINSVRY_					0	0	0		ENST00000559541.1_1_15:52416976-52428016:-|nuORF;nc|ENSG00000069966|O14775-3|GNB5;nc|ENSG00000069966|O14775-2|GNB5;ENSG00000069966|ENST00000261837|GNB5	ENST00000559541.1_1_15:52416976-52428016:-|nuORF	ENST00000559541.1_1_15:52416976-52428016:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.7574462890625	2	541.759278	1081.504	0.11797	6.391E-05	-1.7313	-0.00093795	-1.6133	-0.00087404	541.7582293830787	40.991	0.49721	40.96	40.771	41.268	-0.030991					22	14	2	0	0	0	0.21969	2	2970	2957;2970		71.877	22.436	1	294270			7892	1227	5522	5528	9096;9097	9097					-0.033489296670495605
ESDINSVRY	9	Unmodified	_ESDINSVRY_					0	0	0		ENST00000559541.1_1_15:52416976-52428016:-|nuORF;nc|ENSG00000069966|O14775-3|GNB5;nc|ENSG00000069966|O14775-2|GNB5;ENSG00000069966|ENST00000261837|GNB5	ENST00000559541.1_1_15:52416976-52428016:-|nuORF	ENST00000559541.1_1_15:52416976-52428016:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.757568359375	2	541.759278	1081.504	-0.383	-0.0002075	-1.3179	-0.000714	-1.7009	-0.0009215	541.7585171076632	40.973	0.62394	40.932	40.63	41.254	-0.04081					23	18	2	0	0	0	0.096326	1	3045	3045		93.143	40.207	1	277980			7893	1227	5522	5528	9098	9098					-0.033489296670495605
ESDINSVRY	9	Unmodified	_ESDINSVRY_					0	0	0		ENST00000559541.1_1_15:52416976-52428016:-|nuORF;nc|ENSG00000069966|O14775-3|GNB5;nc|ENSG00000069966|O14775-2|GNB5;ENSG00000069966|ENST00000261837|GNB5	ENST00000559541.1_1_15:52416976-52428016:-|nuORF	ENST00000559541.1_1_15:52416976-52428016:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.7568969726562	2	541.759278	1081.504	-0.7598	-0.00041163	-0.73685	-0.0003992	-1.4967	-0.00081083	541.7586987324759	40.912	0.48538	40.919	40.643	41.128	0.0065765					18	13	2	0	0	0	0.58668	1	2987	2987		47.657	12.039	1	231620			7894	1227	5522	5528	9099	9099					-0.033489296670495605
ESELLVQLEL	10	Unmodified	_ESELLVQLEL_					0	0	0			REV__nc|ENSG00000127914|Q99996-5|AKAP9	REV__nc|ENSG00000127914|Q99996-5|AKAP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	586.8237915039062	2	586.824086	1171.63362	-0.35782	-0.00020998	-0.28304	-0.0001661	-0.64086	-0.00037607	586.8237768221713	110.28	1.7008	110.31	110.06	111.76	0.031738					152	59	5	0	0	0	0.8608	1	12071	12071		34.173	1.3601	1	6766000	+		7895	18753	5523	5529	9100	9100					0.05466826892256904
ESELMYKSK	9	Unmodified	_ESELMYKSK_					0	0	0		ENSG00000164877|ENST00000297508|MICALL2;ENST00000496184.1_1_7:1477093-1477677:-|nuORF;ENST00000479007.5_1_7:1474234-1478659:-|nuORF;nc|ENSG00000164877|Q8IY33-3|MICALL2;ENST00000467394.5_1_7:1474234-1480903:-|nuORF;ENST00000472100.5_1_7:1474569-1480903:-|nuORF;nc|ENSG00000164877|Q8IY33-5|MICALL2	ENSG00000164877|ENST00000297508|MICALL2	ENSG00000164877|ENST00000297508|MICALL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.7789916992188	2	557.776082	1113.53761	0.13504	7.532E-05	3.6218	0.0020201	3.7568	0.0020955	557.7777996045423	25.431	0.4968	25.39	25.152	25.649	-0.04117					29	14	3	0	0	0	0.73802	1	1067	1067		37.812	4.2959	1	71075			7896	6014	5524	5530	9101	9101					-0.014616442195119816
ESERSLRQLV	10	Unmodified	_ESERSLRQLV_					0	0	0		ENSG00000171360|ENST00000246646|KRT38;CON__O76015	ENSG00000171360|ENST00000246646|KRT38	ENSG00000171360|ENST00000246646|KRT38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.8366088867188	2	608.835851	1215.65715	3.145	0.0019148	-1.2572	-0.0007654	1.8879	0.0011494	608.8349484484327	110.59	1.437	110.57	110.28	111.71	-0.027641					106	45	4	0	0	0	0.86218	1	12218	12218		32.812	0	1	3029200		+	7897	576	5525	5531	9102	9102					0.05794685449427561
ESESAEDEGEE	11	Unmodified	_ESESAEDEGEE_					0	0	0			REV__nc|ENSG00000077157|O60237-5|PPP1R12B	REV__nc|ENSG00000077157|O60237-5|PPP1R12B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.7155151367188	2	605.715127	1209.4157	0.11727	7.1035E-05	1.18	0.00071476	1.2973	0.00078579	605.7157923242278	27.973	1.005	27.935	27.473	28.478	-0.038523					53	22	3	0	0	0	0.73893	1	1369	1369		24.519	2.5593	1	308420	+		7898	16737	5526	5532	9103	9103					-0.1806305955881271
ESESLLRWLK	10	Unmodified	_ESESLLRWLK_					0	0	0			REV__ENSG00000005513|ENST00000293894|SOX8	REV__ENSG00000005513|ENST00000293894|SOX8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.8492431640625	2	630.85097	1259.68739	-0.1784	-0.00011254	-1.7736	-0.0011189	-1.952	-0.0012314	630.8497127634344	110.75	1.3676	110.7	110.4	111.77	-0.057182					112	42	4	0	0	0	0.86718	1	12074	12074		27.882	2.3082	1	825620	+		7899	16088	5527	5533	9104	9104					0.06793044114601798
ESESSDRR	8	Unmodified	_ESESSDRR_					0	0	0			REV__nc|ENSG00000273540|Q96MI9|AGBL1	REV__nc|ENSG00000273540|Q96MI9|AGBL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.2183532714844	2	483.217777	964.421001	-0.81811	-0.00039532	1.4707	0.00071066	0.65258	0.00031534	483.2184777480196	93.018	1.1303	93.468	92.947	94.077	0.44988					78	26	4	0	0	0	0.884	1	11142	11142		33.516	3.0119	1	697510	+		7900	23990	5528	5534	9105	9105					-0.06263246395030819
ESEVPPLPPR	10	Unmodified	_ESEVPPLPPR_					0	0	0		nc|ENSG00000162687|Q6UVM3-4|KCNT2;ENST00000610076.1_1_1:196227273-196577439:-|nuORF;nc|ENSG00000162687|Q6UVM3-3|KCNT2;nc|ENSG00000162687|Q6UVM3-2|KCNT2;ENSG00000162687|ENST00000294725|KCNT2;ENST00000451324.6_1_1:196367785-196577439:-|nuORF	nc|ENSG00000162687|Q6UVM3-4|KCNT2	nc|ENSG00000162687|Q6UVM3-4|KCNT2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8104248046875	2	560.803488	1119.59242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.59	1	116.59	116.09	117.09	0								0	0	0	0.45132	1	11947	11947		19.997	2.6318	1				7901	5716	5529	5535	9106	9106					0.03741110643431966
ESFLEKGASDF	11	Unmodified	_ESFLEKGASDF_					0	0	0			REV__nc|ENSG00000100360|Q9BW83-2|IFT27	REV__nc|ENSG00000100360|Q9BW83-2|IFT27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	410.5254821777344	3	410.527671	1228.56118	-0.35453	-0.00014554	-4.3359	-0.00178	-4.6904	-0.0019255	410.52573183171756	56.468	1.2873	56.439	56.212	57.499	-0.028664					114	50	3	0	0	0	0.85439	1	5169	5169		5.6988	1.0862	1	2655000	+		7902	17181	5530	5536	9107	9107					-0.043955071813115865
ESFLRRCL	8	Carbamidomethyl (C)	_ESFLRRC(Carbamidomethyl (C))L_	ESFLRRC(1)L		ESFLRRC(79)L		0	1	0		nc|ENSG00000130939|O95155-4|UBE4B;nc|ENSG00000130939|O95155-3|UBE4B;nc|ENSG00000130939|O95155-2|UBE4B;ENSG00000130939|ENST00000343090|UBE4B	nc|ENSG00000130939|O95155-4|UBE4B	nc|ENSG00000130939|O95155-4|UBE4B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.7814331054688	2	540.784576	1079.5546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.838	1	59.871	59.371	60.371	0.032822								0	0	0	0.1279	1	5544	5544		79.451	17.344	1				7903	14910	5531	5537	9108	9108	199				0.018003211769382688
ESFVKGTIQSR	11	Unmodified	_ESFVKGTIQSR_					0	0	0		ENSG00000125414|ENST00000245503|MYH2;nc|ENSG00000125414|Q9UKX2-2|MYH2	ENSG00000125414|ENST00000245503|MYH2	ENSG00000125414|ENST00000245503|MYH2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.9224548339844	3	417.894577	1250.6619	-0.18598	-7.7719E-05	3.8021	0.0015889	3.6162	0.0015112	417.8953109687731	105.56	0.21455	105.55	105.37	105.58	-0.014809					5	4	2	0	0	0	0.1731	1	11417	11417		10.562	0	1	27830			7904	3389	5532	5538	9109	9109					0.04659569592195112
ESGAKRLASP	10	Unmodified	_ESGAKRLASP_					0	0	0			REV__nc|ENSG00000142185|O94759-3|TRPM2	REV__nc|ENSG00000142185|O94759-3|TRPM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.27996826171875	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.8545	1	8769	8769		36.447	1.2947	1	1954800	+		7905	19727	5533	5539	9110	9110					0.039116708121468946
ESGNGAPVRVP	11	Unmodified	_ESGNGAPVRVP_					0	0	0		ENSG00000075131|ENST00000261881|TIPIN	ENSG00000075131|ENST00000261881|TIPIN	ENSG00000075131|ENST00000261881|TIPIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	542.2933959960938	2	541.783087	1081.55162	-0.1772	-9.6005E-05	4.2322	0.0022929	4.055	0.0021969	541.7852873202811	56.84	2.4261	56.873	56.56	58.986	0.033184					182	81	4	0	0	0	0.68532	1	5304	5304		33.922	0	1	6132200			7906	1319	5534	5540	9111	9111					0.014107693237974672
ESGRVAPVQ	9	Unmodified	_ESGRVAPVQ_					0	0	0			REV__ENST00000497613.2_1_8:145667587-145667875:-|nuORF	REV__ENST00000497613.2_1_8:145667587-145667875:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.76873779296875	2	471.753798	941.493044	-0.56502	-0.00026655	-1.3033	-0.00061485	-1.8683	-0.00088139	471.754332115435	48.698	0.9683	49.602	49.043	50.012	0.90424					30	23	2	0	0	0	0.20789	1	4754	4754		20.947	0	1	211660	+		7907	27773	5535	5541	9112	9112					0.019957127493285043
ESHHHRLH	8	Unmodified	_ESHHHRLH_					0	0	0			REV__ENST00000502249.6_1_4:119401524-119435218:+|nuORF	REV__ENST00000502249.6_1_4:119401524-119435218:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8084716796875	2	526.760281	1051.50601	2.1165	0.0011149	-2.2964	-0.0012096	-0.17988	-9.4756E-05	527.262079291392	99.801	0.20176	100.13	99.976	100.18	0.33295					5	4	2	0	0	0	0.4196	1	12064	12064		76.847	11.043	1	51216	+		7908	27815	5536	5542	9113	9113					-0.01768411347916299
ESHLKASFK	9	Unmodified	_ESHLKASFK_					0	0	0			REV__nc|ENSG00000007237|O60861-2|GAS7	REV__nc|ENSG00000007237|O60861-2|GAS7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035278320312	2	523.785099	1045.55564	-1.5375	-0.00080533	2.2344	0.0011703	0.69682	0.00036499	523.7870640223374	88.487	1.0077	88.66	88.378	89.386	0.17234					27	23	2	0	0	0	0.20789	1	8727	8727		19.997	0	1	72217	+		7909	16120	5537	5543	9114	9114					0.03468858817495857
ESIFKKPFLGN	11	Unmodified	_ESIFKKPFLGN_					0	0	0			REV__ENSG00000154485|ENST00000368808|MMP21	REV__ENSG00000154485|ENST00000368808|MMP21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3603515625	2	640.355888	1278.69722	2.419	0.001549	2.1895	0.0014021	4.6085	0.0029511	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.72739	1	10885	10885		27.047	4.4677	1	625580	+		7910	20390	5538	5544	9115	9115					0.0690223211997818
ESINNEKLIAL	11	Unmodified	_ESINNEKLIAL_					0	0	0			REV__ENSG00000100982|ENST00000372409|PCIF1	REV__ENSG00000100982|ENST00000372409|PCIF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3475952148438	2	622.34826	1242.68197	-0.17246	-0.00010733	-2.1066	-0.001311	-2.2791	-0.0014184	622.3467162320231	96.253	1.81	96.253	95.614	97.424	0					80	41	2	0	0	0	0.51007	1	9610	9610		51.193	11.94	1	250670	+		7911	17233	5539	5545	9116	9116					0.07033320532173093
ESINNEKLIAL	11	Unmodified	_ESINNEKLIAL_					0	0	0			REV__ENSG00000100982|ENST00000372409|PCIF1	REV__ENSG00000100982|ENST00000372409|PCIF1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	622.34826	1242.68197	1.6775	0.001044	-2.8139	-0.0017512	-1.1363	-0.0007072	622.3464565136551	95.646	2.3215	96.067	95.19	97.512	0.42051	-0.057653	-0.00037757	NaN	51.193	96	56	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	355270	+		7912	17233	5539	5545							0.07033320532173093
ESINNEKLIAL	11	Unmodified	_ESINNEKLIAL_					0	0	0			REV__ENSG00000100982|ENST00000372409|PCIF1	REV__ENSG00000100982|ENST00000372409|PCIF1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	622.34826	1242.68197	1.2777	0.00079519	-3.4169	-0.0021265	-2.1392	-0.0013313	622.3461226126285	95.901	1.7541	96.305	95.417	97.171	0.40451	0.18055	-0.0011282	NaN	51.193	97	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	345160	+		7913	17233	5539	5545							0.07033320532173093
ESIPTHKLSSL	11	Unmodified	_ESIPTHKLSSL_					0	0	0		ENSG00000147082|ENST00000376042|CCNB3	ENSG00000147082|ENST00000376042|CCNB3	ENSG00000147082|ENST00000376042|CCNB3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.7587890625	2	606.335153	1210.65575	0.79347	0.00048111	-1.1834	-0.00071753	-0.38992	-0.00023642	606.3349688085225	53.616	0.37437	54.03	53.91	54.284	0.4139					9	8	2	0	0	0	0.14828	1	5447	5447		63.534	29.612	1	126900			7914	4879	5540	5546	9117	9117					0.0588505136065578
ESIPTLLPL	9	Unmodified	_ESIPTLLPL_					0	0	0			REV__nc|ENSG00000111834|Q5TD94-2|RSPH4A	REV__nc|ENSG00000111834|Q5TD94-2|RSPH4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79583740234375	2	491.794601	981.574648	-0.17405	-8.5598E-05	2.4406	0.0012003	2.2666	0.0011147	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.78058	1	3514	3514		30.504	6.3009	1	2994900	+		7915	17899	5541	5547	9118	9118					0.08312395388577443
ESITRRRQAP	10	Unmodified	_ESITRRRQAP_					0	0	0		nc|ENSG00000128591|Q14315-2|FLNC;ENSG00000128591|ENST00000325888|FLNC	nc|ENSG00000128591|Q14315-2|FLNC	nc|ENSG00000128591|Q14315-2|FLNC	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	607.2071533203125	2	607.341635	1212.66872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.763	1	16.822	16.322	17.322	0.059269								0	0	0	0.45132	1	183	183		25.574	6.4705	1				7916	3549	5542	5548	9119	9119					0.0708892726340764
ESIVKPDKPKL	11	Unmodified	_ESIVKPDKPKL_					0	0	0			REV__ENSG00000133687|ENST00000539277|TMTC1	REV__ENSG00000133687|ENST00000539277|TMTC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3829345703125	2	627.37682	1252.73909	6.5881	0.0041332	2.3069	0.0014473	8.8949	0.0055805	627.3780077284683	111.53	0.81311	111.58	110.9	111.71	0.04509					59	29	3	0	0	0	0.7144	1	13507	13507		29.17	4.6509	1	12238000	+		7917	19090	5543	5549	9120	9120					0.12282787808499052
ESIYLNTR	8	Unmodified	_ESIYLNTR_					0	0	0			REV__ENSG00000137642|ENST00000260197|SORL1	REV__ENSG00000137642|ENST00000260197|SORL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7814636230469	2	498.261456	994.50836	-0.77828	-0.00038778	0.50564	0.00025194	-0.27264	-0.00013585	498.26158021312597	38.517	0.69957	39.04	38.711	39.411	0.52235					38	16	3	0	0	0	0.4196	1	3221	3221		64.207	11.271	1	235950	+		7918	19397	5544	5550	9121	9121					0.010885795465242154
ESKAHVHKLEK	11	Unmodified	_ESKAHVHKLEK_					0	0	0			REV__ENSG00000038219|ENST00000040738|BOD1L1	REV__ENSG00000038219|ENST00000040738|BOD1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.9141845703125	3	435.913971	1304.72008	-0.43164	-0.00018816	0.6799	0.00029638	0.24826	0.00010822	435.91414221645005	33.298	0.80004	33.243	32.853	33.653	-0.05463					44	19	3	0	0	0	0.58516	1	2003	2003		45.908	6.035	1	149350	+		7919	16300	5545	5551	9122	9122					0.07991251237467623
ESKGSIERLVP	11	Unmodified	_ESKGSIERLVP_					0	0	0			REV__chr13:35628248-35629156|37|13.46|0.34|5.32|+|0|NBEA,NBEA|1	REV__chr13:35628248-35629156|37|13.46|0.34|5.32|+|0|NBEA,NBEA|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.56451416015625	3	405.562827	1213.66665	1.3716	0.00055625	3.2979	0.0013375	4.6694	0.0018937	405.5640303977856	59.974	1.644	60.007	59.019	60.663	0.032822					112	41	3	0	0	0	0.7434	1	5561	5561		15.921	0	1	297440	+		7920	15567	5546	5552	9123	9123					0.0683645373494528
ESKGVVKFGW	10	Unmodified	_ESKGVVKFGW_					0	0	0		nc|ENSG00000064651|P55011-3|SLC12A2;ENSG00000064651|ENST00000262461|SLC12A2	nc|ENSG00000064651|P55011-3|SLC12A2	nc|ENSG00000064651|P55011-3|SLC12A2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.3153076171875	2	568.808574	1135.60259	-1.0952	-0.00062293	0.022147	1.2597E-05	-1.073	-0.00061034	568.8088278319389	79.634	0.44958	79.733	79.466	79.915	0.098701					19	14	2	0	0	0	0.37624	1	7536	7536		32.751	0.79567	1	93289			7921	1106	5547	5553	9124	9124					0.04021718368676375
ESKKGKKK	8	Unmodified	_ESKKGKKK_					0	0	0			REV__ENST00000446401.1_1_2:114588904-114600908:-|nuORF	REV__ENST00000446401.1_1_2:114588904-114600908:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7971496582031	2	466.798009	931.581465	0.35994	0.00016802	-1.4055	-0.00065611	-1.0456	-0.00048809	466.79729216650486	19.702	2.2945	19.233	18.459	20.753	-0.46967					107	51	4	0	0	0	0.8347	1	618	618		23.042	3.0457	1	2065900	+		7922	26805	5548	5554	9125	9125					0.11293753059806022
ESKKGRKR	8	Unmodified	_ESKKGRKR_					0	0	0		ENST00000367033.3_1_1:208417386-208417521:-|nuORF	ENST00000367033.3_1_1:208417386-208417521:-|nuORF	ENST00000367033.3_1_1:208417386-208417521:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25079345703125	2	494.804157	987.593761	-1.2397	-0.00061339	3.3298	0.0016476	2.0902	0.0010342	494.80589652567915	62.505	1.1731	62.892	62.229	63.402	0.38779					42	26	2	0	0	0	0.4196	1	6731	6731		17.365	0	1	135370			7923	10528	5549	5555	9126	9126					0.09946789522859945
ESKKKVVG	8	Unmodified	_ESKKKVVG_					0	0	0			REV__ENSG00000175073|ENST00000310421|VCPIP1	REV__ENSG00000175073|ENST00000310421|VCPIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77142333984375	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.884	1	2875	2875		33.516	6.8227	1	9763800	+		7924	22036	5550	5556	9127	9127					0.08654375277149029
ESKLKEKKA	9	Unmodified	_ESKLKEKKA_					0	0	0			REV__ENSG00000145309|ENST00000273936|CABS1	REV__ENSG00000145309|ENST00000273936|CABS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8169555664062	2	530.821681	1059.62881	-1.4774	-0.00078422	-0.17201	-9.1307E-05	-1.6494	-0.00087553	530.8215825603746	86.811	0.86749	86.976	86.651	87.519	0.16473					36	19	2	0	0	0	0.20789	1	8506	8506		40.778	15.204	1	720390	+		7925	19936	5551	5557	9128	9128					0.10137987540133508
ESKPGIVSPPV	11	Unmodified	_ESKPGIVSPPV_					0	0	0			REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.3102416992188	2	555.313689	1108.61282	-0.67024	-0.00037219	-3.4435	-0.0019122	-4.1137	-0.0022844	555.312337360713	60.004	1.246	60.557	60.079	61.325	0.55323					38	33	2	0	0	0	0.6921	1	6370	6370		32.812	3.6424	1	819920	+		7926	19793	5552	5558	9129	9129					0.06286281303255237
ESKQKNLLGS	10	Unmodified	_ESKQKNLLGS_					0	0	0		ENSG00000163867|ENST00000357182|ZMYM6;nc|ENSG00000163867|O95789-5|ZMYM6;ENST00000493328.5_1_1:35452707-35454621:-|nuORF	ENSG00000163867|ENST00000357182|ZMYM6	ENSG00000163867|ENST00000357182|ZMYM6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3062133789062	2	552.306395	1102.59824	-0.70613	-0.00039	0.73262	0.00040463	0.026487	1.4629E-05	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.69342	1	9721	9721		45.022	10.85	1	1609500			7927	5873	5553	5559	9130	9130					0.05104209155092576
ESKQKNLLGS	10	Unmodified	_ESKQKNLLGS_					0	0	0		ENSG00000163867|ENST00000357182|ZMYM6;nc|ENSG00000163867|O95789-5|ZMYM6;ENST00000493328.5_1_1:35452707-35454621:-|nuORF	ENSG00000163867|ENST00000357182|ZMYM6	ENSG00000163867|ENST00000357182|ZMYM6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3057250976562	2	552.306395	1102.59824	1.2817	0.0007079	-1.3256	-0.00073213	-0.043866	-2.4228E-05	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.76096	1	9771	9771		41.427	2.1738	1	1712700			7928	5873	5553	5559	9131	9131					0.05104209155092576
ESKTQTKN	8	Unmodified	_ESKTQTKN_					0	0	0			REV__ENSG00000177853|ENST00000316045|ZNF518A	REV__ENSG00000177853|ENST00000316045|ZNF518A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2444763183594	2	468.243264	934.471974	0.22264	0.00010425	3.0516	0.0014289	3.2742	0.0015331	468.24455399922584	105.74	1.8615	105.78	105.17	107.03	0.038322					109	43	4	0	0	0	0.87479	1	11589	11589		30.504	2.6214	1	1899000	+		7929	22232	5554	5560	9132	9132					0.0021170264981265063
ESLEYQQF	8	Unmodified	_ESLEYQQF_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	522.2384033203125	2	522.237647	1042.46074	0.092336	4.8221E-05	3.0527	0.0015943	3.1451	0.0016425	522.239038988769	50.055	0.85317	50.052	49.756	50.609	-0.0030327					47	20	3	0	0	0	0.36734	1	4236	4236		99.375	6.2317	1	644230			7930	8189	5555	5561	9133	9133					-0.05879119444330172
ESLFQQTDFLK	11	Unmodified	_ESLFQQTDFLK_					0	0	0			REV__ENSG00000137265|ENST00000380956|IRF4	REV__ENSG00000137265|ENST00000380956|IRF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.5653381347656	3	452.566237	1354.67688	0.93565	0.00042344	-2.9964	-0.0013561	-2.0608	-0.00093264	452.5648353617543	17.96	0.6287	17.881	17.689	18.317	-0.078943					67	26	4	0	0	0	0.55276	1	274	274		48.188	8.3148	1	393520	+		7931	19373	5556	5562	9134	9134					0.01373016669504068
ESLKEELMC	9	Unmodified	_ESLKEELMC_					0	0	0		ENSG00000108759|ENST00000225899|KRT32;CON__Q14532;nc|ENSG00000126337|O76013-2|KRT36;ENSG00000126337|ENST00000328119|KRT36;CON__O76013	ENSG00000108759|ENST00000225899|KRT32	ENSG00000108759|ENST00000225899|KRT32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.25146484375	2	541.248843	1080.48313	0.17304	9.3659E-05	3.9061	0.0021142	4.0792	0.0022079	541.2508865996078	51.685	0.7382	51.662	51.369	52.107	-0.02343					29	17	2	0	0	0	0.19818	1	4521	4521		74.255	2.3776	1	407500		+	7932	606	5557	5563	9135	9135					-0.05388979362578539
ESLKKKIQPK	10	Unmodified	_ESLKKKIQPK_					0	0	0		nc|ENSG00000153814|Q86VZ6-3|JAZF1;ENSG00000153814|ENST00000283928|JAZF1	nc|ENSG00000153814|Q86VZ6-3|JAZF1	nc|ENSG00000153814|Q86VZ6-3|JAZF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2392883300781	3	400.255446	1197.74451	-0.063376	-2.5367E-05	-1.9756	-0.00079074	-2.039	-0.00081611	400.25461438306974	19.65	0.36713	19.02	18.847	19.214	-0.62961					11	7	2	0	0	0	0.37624	1	539	539		6.6596	0	1	27479			7933	5242	5558	5564	9136	9136					0.15354511390978587
ESLLLPQKGY	10	Unmodified	_ESLLLPQKGY_					0	0	0			REV__ENSG00000205609|ENST00000380876|EIF3CL	REV__ENSG00000205609|ENST00000380876|EIF3CL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.320068359375	2	574.321514	1146.62847	-0.44784	-0.0002572	-2.9941	-0.0017196	-3.4419	-0.0019768	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.74274	1	9484	9484		42.396	6.7778	1	1099700	+		7934	23567	5559	5565	9137	9137					0.061025678202895506
ESLLPTAVL	9	Unmodified	_ESLLPTAVL_					0	0	0		ENST00000325658.3_1_14:60717110-60717179:+|nuORF	ENST00000325658.3_1_14:60717110-60717179:+|nuORF	ENST00000325658.3_1_14:60717110-60717179:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.77850341796875	2	471.778951	941.543348	0.57127	0.00026951	-0.52977	-0.00024994	0.041494	1.9576E-05	471.7785193324983	82.773	0.8857	82.707	82.281	83.166	-0.066185					44	20	3	0	0	0	0.78058	1	8394	8394		30.504	2.6214	1	313290			7935	10073	5560	5566	9138	9138					0.070238223544834
ESLLPTAVL	9	Unmodified	_ESLLPTAVL_					0	0	0		ENST00000325658.3_1_14:60717110-60717179:+|nuORF	ENST00000325658.3_1_14:60717110-60717179:+|nuORF	ENST00000325658.3_1_14:60717110-60717179:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.77947998046875	2	471.778951	941.543348	-0.3072	-0.00014493	0.086279	4.0705E-05	-0.22092	-0.00010423	471.7788353055033	81.895	1.368	82.322	81.921	83.289	0.42646					68	33	4	0	0	0	0.19953	2	9448	9448;9496		73.975	5.49	1	2126100			7936	10073	5560	5566	9139;9140	9139					0.070238223544834
ESLLSPRR	8	Unmodified	_ESLLSPRR_					0	0	0			REV__nc|ENSG00000196498|Q9Y618-5|NCOR2;REV__nc|ENSG00000141027|O75376-2|NCOR1	REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27947998046875	2	479.277441	956.540328	-1.6825	-0.00080636	2.3683	0.0011351	0.68584	0.00032871	479.27847474048673	97.333	1.1091	97.535	97.052	98.161	0.20206					56	25	3	0	0	0	0.84341	1	10043	10043		24.203	1.1603	1	515040	+		7937	23137;19657	5561	5567	9141	9141					0.060319920203255606
ESLLVSVQR	9	Unmodified	_ESLLVSVQR_					0	0	0		nc|ENSG00000166579|Q9GZM8-3|NDEL1;ENSG00000166579|ENST00000334527|NDEL1;nc|ENSG00000166579|Q9GZM8-2|NDEL1	nc|ENSG00000166579|Q9GZM8-3|NDEL1	nc|ENSG00000166579|Q9GZM8-3|NDEL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.7974853515625	2	515.798206	1029.58186	0.5074	0.00026172	-0.63996	-0.00033009	-0.13255	-6.837E-05	515.7977750786778	22.467	0.5186	22.41	22.191	22.709	-0.057203					37	22	2	0	0	0	0.58668	1	685	685		47.657	5.2612	1	69122			7938	6212	5562	5568	9142	9142					0.06825127989009161
ESLLVSVQR	9	Unmodified	_ESLLVSVQR_					0	0	0		nc|ENSG00000166579|Q9GZM8-3|NDEL1;ENSG00000166579|ENST00000334527|NDEL1;nc|ENSG00000166579|Q9GZM8-2|NDEL1	nc|ENSG00000166579|Q9GZM8-3|NDEL1	nc|ENSG00000166579|Q9GZM8-3|NDEL1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	515.798206	1029.58186	0.86203	0.00044463	-0.8464	-0.00043657	0.015635	8.0647E-06	515.7976040418051	22.225	0.54082	22.29	22.042	22.583	0.064745	-0.090524	-0.00036094	NaN	47.657	35	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49133			7939	6212	5562	5568							0.06825127989009161
ESLNSLKY	8	Unmodified	_ESLNSLKY_					0	0	0		nc|ENSG00000165115|Q86VH2-3|KIF27;nc|ENSG00000165115|Q86VH2-2|KIF27;ENSG00000165115|ENST00000297814|KIF27	nc|ENSG00000165115|Q86VH2-3|KIF27	nc|ENSG00000165115|Q86VH2-3|KIF27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2496643066406	2	477.250557	952.486562	1.0851	0.00051786	-1.0068	-0.00048049	0.078314	3.7375E-05	477.24991379971385	34.385	0.49487	34.595	34.359	34.854	0.21003					18	11	2	0	0	0	0.83456	1	2554	2554		60.972	5.4677	1	293220			7940	6048	5563	5569	9143	9143					0.008417747979478918
ESLNSLKY	8	Unmodified	_ESLNSLKY_					0	0	0		nc|ENSG00000165115|Q86VH2-3|KIF27;nc|ENSG00000165115|Q86VH2-2|KIF27;ENSG00000165115|ENST00000297814|KIF27	nc|ENSG00000165115|Q86VH2-3|KIF27	nc|ENSG00000165115|Q86VH2-3|KIF27	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	477.250557	952.486562	0.205	9.7836E-05	-0.049818	-2.3776E-05	0.15518	7.4061E-05	477.2504602874081	34.329	0.49415	34.634	34.406	34.901	0.30494	0.019687	0.00029356	NaN	60.972	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	421200			7941	6048	5563	5569							0.008417747979478918
ESLPKEYQELI	11	Unmodified	_ESLPKEYQELI_					0	0	0			REV__ENST00000523711.5_1_8:1824717-1874701:+|nuORF	REV__ENST00000523711.5_1_8:1824717-1874701:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.7610168457031	3	450.238009	1347.6922	-0.24764	-0.0001115	3.7255	0.0016773	3.4778	0.0015659	450.2395923507213	33.537	0.88175	33.706	33.061	33.943	0.16971					42	20	3	0	0	0	0.17243	1	2444	2444		17.167	0	1	244460	+		7942	17468	5564	5570	9144	9144					0.03225883466734558
ESLPKRAVPLR	11	Unmodified	_ESLPKRAVPLR_					0	0	0			REV__nc|ENSG00000130713|Q13868-3|EXOSC2	REV__nc|ENSG00000130713|Q13868-3|EXOSC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.59381103515625	3	422.594461	1264.76155	-1.6666	-0.00070429	-1.2985	-0.00054872	-2.965	-0.001253	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.75121	1	4654	4654		21.78	1.75	1	771770	+		7943	18897	5565	5571	9145	9145					0.13976431996775318
ESLPKRAVPLR	11	Unmodified	_ESLPKRAVPLR_					0	0	0			REV__nc|ENSG00000130713|Q13868-3|EXOSC2	REV__nc|ENSG00000130713|Q13868-3|EXOSC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.92999267578125	3	422.594461	1264.76155	-0.62547	-0.00026432	-2.6174	-0.0011061	-3.2429	-0.0013704	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.77511	1	4992	4992		16.53	0.52308	1	1069500	+		7944	18897	5565	5571	9146	9146					0.13976431996775318
ESLPKRAVPLR	11	Unmodified	_ESLPKRAVPLR_					0	0	0			REV__nc|ENSG00000130713|Q13868-3|EXOSC2	REV__nc|ENSG00000130713|Q13868-3|EXOSC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.593017578125	3	422.594461	1264.76155	0.31839	0.00013455	-3.8415	-0.0016234	-3.5231	-0.0014888	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.76251	1	4542	4542		19.263	0	1	1249100	+		7945	18897	5565	5571	9147	9147					0.13976431996775318
ESLQNQQNA	9	Unmodified	_ESLQNQQNA_					0	0	0		nc|ENSG00000277399|Q6PRD1|GPR179;ENSG00000277399|ENST00000616987|GPR179	nc|ENSG00000277399|Q6PRD1|GPR179	nc|ENSG00000277399|Q6PRD1|GPR179	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.2429809570312	2	516.241252	1030.46795	0.15242	7.8683E-05	3.4257	0.0017685	3.5781	0.0018472	516.242996114888	48.172	0.50913	48.163	48.005	48.514	-0.0093269					19	11	2	0	0	0	0.67345	1	3982	3982		42.396	0.96952	1	193030			7946	9019	5566	5572	9148	9148					-0.046063868438977806
ESLRKLKAS	9	Unmodified	_ESLRKLKAS_					0	0	0		ENSG00000080986|ENST00000261597|NDC80	ENSG00000080986|ENST00000261597|NDC80	ENSG00000080986|ENST00000261597|NDC80	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3155517578125	2	516.314023	1030.61349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.23	1	119.25	118.75	119.75	0.026466								0	0	0	0.32159	1	13122	13122		23.042	0	1				7947	1456	5567	5573	9149	9149					0.09941120742928433
ESLWKLIQQA	10	Unmodified	_ESLWKLIQQA_					0	0	0			REV__ENSG00000114204|ENST00000264677|SERPINI2	REV__ENSG00000114204|ENST00000264677|SERPINI2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.3378295898438	2	608.340238	1214.66592	-0.55482	-0.00033752	-2.7032	-0.0016444	-3.258	-0.001982	608.3384519772599	30.696	0.6201	30.725	30.45	31.07	0.028618					30	13	3	0	0	0	0.20373	1	2032	2032		85.161	16.315	1	306100	+		7948	18036	5568	5574	9150	9150					0.06717659085916239
ESLWKLIQQA	10	Unmodified	_ESLWKLIQQA_					0	0	0			REV__ENSG00000114204|ENST00000264677|SERPINI2	REV__ENSG00000114204|ENST00000264677|SERPINI2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	608.340238	1214.66592	0.30182	0.00018361	-3.4242	-0.0020831	-3.1224	-0.0018995	608.3378690906632	30.78	0.52327	30.784	30.535	31.058	0.0037212	0.029731	-0.00067847	NaN	85.161	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	440860	+		7949	18036	5568	5574							0.06717659085916239
ESNRLTYI	8	Unmodified	_ESNRLTYI_					0	0	0			REV__ENSG00000237388|ENST00000446524|OR4A47	REV__ENSG00000237388|ENST00000446524|OR4A47	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.78125	2	498.261456	994.50836	-1.1569	-0.00057644	0.38436	0.00019151	-0.77254	-0.00038493	498.26157827246743	38.51	1.1272	38.851	38.618	39.745	0.34187					53	26	3	0	0	0	0.4196	1	3213	3213		44.117	0	1	201370	+		7950	23796	5569	5575	9151	9151					0.010885795465128467
ESNSKELLI	9	Unmodified	_ESNSKELLI_					0	0	0			REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|92|2|sense	REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|92|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3143920898438	2	516.782222	1031.54989	1.9366	0.0010008	2.6957	0.0013931	4.6323	0.0023939	516.7835296069785	99.528	0.87357	99.861	99.455	100.33	0.33294					32	21	2	0	0	0	0.20789	1	12005	12005		21.96	4.5949	1	169150	+		7951	29563	5570	5576	9152	9152					0.035377155151991246
ESNSSLTGQL	10	Unmodified	_ESNSSLTGQL_					0	0	0		nc|ENSG00000128596|Q96JN2-3|CCDC136;nc|ENSG00000128596|Q96JN2-2|CCDC136;ENSG00000128596|ENST00000297788|CCDC136;nc|ENSG00000128596|Q96JN2-4|CCDC136;ENST00000480137.1_1_7:128441244-128446479:+|nuORF	nc|ENSG00000128596|Q96JN2-3|CCDC136	nc|ENSG00000128596|Q96JN2-3|CCDC136	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.2506713867188	2	518.251286	1034.48802	1.0424	0.00054025	-1.1025	-0.00057138	-0.060078	-3.1136E-05	518.2505225920111	33.73	0.62522	33.9	33.568	34.193	0.16971					33	14	3	0	0	0	0.2953	1	2459	2459		72.879	5.3856	1	427720			7952	3550	5571	5577	9153	9153					-0.027846359039585877
ESPAPRRP	8	Unmodified	_ESPAPRRP_					0	0	0		ENST00000260743.9_1_10:105210978-105212064:-|nuORF;ENST00000369788.7_1_10:105209823-105212064:-|nuORF	ENST00000260743.9_1_10:105210978-105212064:-|nuORF	ENST00000260743.9_1_10:105210978-105212064:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.2473449707031	2	455.248683	908.482814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.131	1	53.148	52.648	53.648	0.017487								0	0	0	0.29452	1	4664	4664		33.516	0	1				7953	9390	5572	5578	9154	9154					0.024911498147503153
ESPIWRMY	8	Oxidation (M)	_ESPIWRM(Oxidation (M))Y_		ESPIWRM(1)Y		ESPIWRM(71)Y	0	0	1		ENSG00000172689|ENST00000308287|MS4A10	ENSG00000172689|ENST00000308287|MS4A10	ENSG00000172689|ENST00000308287|MS4A10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.2595825195312	2	549.257859	1096.50117	0.21664	0.00011899	1.8176	0.00099834	2.0343	0.0011173	549.2587347860896	33.876	0.53658	33.819	33.514	34.051	-0.056385					26	11	3	0	0	0	0.60155	1	2086	2086		71.378	12.596	1	86785			7954	6784	5573	5579	9155	9155		116			-0.043224763255466314
ESPLLVRLRL	10	Unmodified	_ESPLLVRLRL_					0	0	0		ENST00000271640.9_1_1:150935480-150935609:+|nuORF	ENST00000271640.9_1_1:150935480-150935609:+|nuORF	ENST00000271640.9_1_1:150935480-150935609:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3814697265625	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.85251	1	2729	2729		19.997	0	1	352020			7955	9563	5574	5580	9156	9156					0.15525931110823876
ESPLVQLLL	9	Unmodified	_ESPLVQLLL_					0	0	0		nc|ENSG00000139144|O75747-2|PIK3C2G;chr12:18346836-18371180|22|13.09|0.59|4.47|+|ENST00000433979|PIK3C2G,PIK3C2G;ENSG00000139144|ENST00000538779|PIK3C2G;chr12:18262792-18282004|25|21.64|0.27|6.32|+|ENST00000675017|PIK3C2G,PIK3C2G	nc|ENSG00000139144|O75747-2|PIK3C2G	nc|ENSG00000139144|O75747-2|PIK3C2G	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.7987976074219	2	506.307875	1010.6012	-0.71236	-0.00036068	2.8135	0.0014245	2.1011	0.0010638	506.3092918145893	49.505	2.3029	49.509	48.577	50.88	0.0035973					80	56	2	0	0	0	0.20789	1	4303	4303		6.7355	3.3255	1	177720			7956	124	5575	5581	9157	9157					0.09632084279917308
ESPTRNLSL	9	Unmodified	_ESPTRNLSL_					0	0	0			REV__nc|ENSG00000205754|G3V0H7|SLCO1B7	REV__nc|ENSG00000205754|G3V0H7|SLCO1B7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7712097167969	2	508.772188	1015.52982	0.077994	3.9681E-05	-0.27284	-0.00013881	-0.19485	-9.9133E-05	508.7720010142823	49.67	0.73777	50.13	49.789	50.527	0.45983					39	17	3	0	0	0	0.29259	1	4854	4854		65.465	1.2581	1	1760400	+		7957	30174	5576	5582	9158	9158					0.022679645752418764
ESPVFAPVY	9	Unmodified	_ESPVFAPVY_					0	0	0		ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.27606201171875	2	504.755475	1007.4964	0.7472	0.00037715	-0.34823	-0.00017577	0.39897	0.00020138	504.7549367014891	64.431	0.58214	64.985	64.685	65.267	0.55386					19	13	2	0	0	0	0.20789	1	7016	7016		31.955	0	1	120200			7958	1821	5577	5583	9159	9159					-0.007050371966670355
ESQLLLLL	8	Unmodified	_ESQLLLLL_					0	0	0			REV__ENST00000582136.5_1_17:73106674-73110284:+|nuORF	REV__ENST00000582136.5_1_17:73106674-73110284:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.7906799316406	2	464.789318	927.564084	0.2474	0.00011499	2.8684	0.0013332	3.1158	0.0014482	464.7904221539816	34.07	1.6806	34.28	33.524	35.204	0.21003					97	40	4	0	0	0	0.9295	1	2469	2469		55.504	0	1	944210	+		7959	29056	5578	5584	9160	9160					0.09740412734140591
ESQNPLPHQ	9	Unmodified	_ESQNPLPHQ_					0	0	0			REV__ENSG00000151322|ENST00000356141|NPAS3	REV__ENSG00000151322|ENST00000356141|NPAS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.2567138671875	2	525.254163	1048.49377	0.95029	0.00049914	-1.2308	-0.00064648	-0.2805	-0.00014733	525.2534040193176	20.413	0.40951	20.343	20.205	20.614	-0.070011					32	18	2	0	0	0	0.78536	1	504	504		29.15	6.1071	1	58318	+		7960	15591	5579	5585	9161	9161					-0.02853492601616381
ESQSNKEKQN	10	Unmodified	_ESQSNKEKQN_					0	0	0			REV__ENST00000355476.7_2_4:26426255-26430342:+|nuORF	REV__ENST00000355476.7_2_4:26426255-26430342:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.280029296875	2	596.283648	1190.55274	-0.58147	-0.00034672	-4.3719	-0.0026069	-4.9534	-0.0029536	596.2808950825342	110.75	1.8249	110.7	110.5	112.33	-0.057281					104	61	2	0	0	0	0.86272	1	12153	12153		24.519	1.1413	1	160640	+		7961	25379	5580	5586	9162	9162					-0.0349106109792956
ESRKPEKKRA	10	Unmodified	_ESRKPEKKRA_					0	0	0			REV__ENST00000446309.1_1_7:86780824-86781686:-|nuORF	REV__ENST00000446309.1_1_7:86780824-86781686:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	410.24176025390625	3	410.242199	1227.70477	1.362	0.00055874	-0.022314	-9.1541E-06	1.3397	0.00054959	410.2421730793312	16.113	0.24787	15.626	15.531	15.779	-0.48718					10	5	2	0	0	0	0.85259	1	92	92		20.03	1.7684	1	69101	+		7962	26804	5581	5587	9163	9163					0.10002384440281276
ESRRADVL	8	Unmodified	_ESRRADVL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;ENST00000597202.1_1_19:7625506-7626445:+|nuORF	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	473.260498046875	2	473.259248	944.503943	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.16	1	45.173	44.673	45.673	0.012058								0	0	0	0.29871	1	3233	3233		23.042	0	1				7963	885	5582	5588	9164	9164					0.02947115123618005
ESRSKPIKT	9	Unmodified	_ESRSKPIKT_					0	0	0			REV__ENSG00000138640|ENST00000264344|FAM13A	REV__ENSG00000138640|ENST00000264344|FAM13A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.74365234375	2	523.303655	1044.59276	0.52662	0.00027558	-1.9911	-0.001042	-1.4645	-0.00076638	523.3032975655975	49.039	0.24745	49.943	49.805	50.053	0.90424					8	5	2	0	0	0	0.20789	1	4768	4768		30.318	0	1	135990	+		7964	19485	5583	5589	9165	9165					0.07224530363305348
ESSHLELKY	9	Unmodified	_ESSHLELKY_					0	0	0			REV__nc|ENSG00000164989|Q6TFL3-3|CCDC171	REV__nc|ENSG00000164989|Q6TFL3-3|CCDC171	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.2643432617188	2	553.279846	1104.54514	-0.41195	-0.00022792	-0.68532	-0.00037917	-1.0973	-0.0006071	553.2791854810619	54.592	0.71528	55.166	54.821	55.536	0.57362					24	16	2	0	0	0	0.20789	1	5632	5632		30.504	4.9296	1	396110	+		7965	21138	5584	5590	9166	9166					-0.0029516862757645868
ESSKNSLGKHL	11	Unmodified	_ESSKNSLGKHL_					0	0	0		ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.323486328125	2	600.322576	1198.6306	-0.18991	-0.00011401	2.4193	0.0014524	2.2294	0.0013384	600.3238493032328	110.54	1.5294	110.54	110.28	111.81	0					121	48	3	0	0	0	0.58425	1	11491	11491		45.972	5.9141	1	894450			7966	12583	5585	5591	9167	9167					0.0392299655811712
ESSKNSLGKHL	11	Unmodified	_ESSKNSLGKHL_					0	0	0		ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	600.322576	1198.6306	-0.53344	-0.00032024	2.6737	0.0016051	2.1402	0.0012848	600.3240187615943	110.58	1.5843	110.52	110.31	111.9	-0.055084	0.14576	0.001492	NaN	45.972	109	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2037300			7967	12583	5585	5591							0.0392299655811712
ESSKNSLGKHL	11	Unmodified	_ESSKNSLGKHL_					0	0	0		ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	600.322576	1198.6306	-0.31535	-0.00018931	2.2292	0.0013383	1.9139	0.0011489	600.3238085127333	110.47	0.82883	110.5	110.28	111.1	0.031738	0.1221	0.00095838	NaN	45.972	60	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1557800			7968	12583	5585	5591							0.0392299655811712
ESSKNSLGKHL	11	Unmodified	_ESSKNSLGKHL_					0	0	0		ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	600.322576	1198.6306	0.98716	0.00059261	1.6567	0.00099453	2.6438	0.0015871	600.3234430843651	110.23	0.75959	110.34	110.18	110.94	0.11658	-0.0325	0.00027093	NaN	45.972	55	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1013800			7969	12583	5585	5591							0.0392299655811712
ESSKNSLGKHL	11	Unmodified	_ESSKNSLGKHL_					0	0	0		ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	600.322576	1198.6306	0.90067	0.0005407	1.2525	0.00075188	2.1531	0.0012926	600.3232537774976	110.32	0.86794	110.39	110.18	111.05	0.073685	0.014206	-0.00021437	NaN	45.972	47	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1063100			7970	12583	5585	5591							0.0392299655811712
ESSKNSLGKHL	11	Unmodified	_ESSKNSLGKHL_					0	0	0		ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	600.322576	1198.6306	-1.2884	-0.00077344	3.4501	0.0020712	2.1617	0.0012977	600.3245535670928	110.3	0.89249	110.29	110.12	111.01	-0.0074387	-0.088007	0.0024242	NaN	45.972	44	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1081700			7971	12583	5585	5591							0.0392299655811712
ESSKNSLGKHL	11	Unmodified	_ESSKNSLGKHL_					0	0	0		ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	600.322576	1198.6306	2.6706	0.0016032	-0.45169	-0.00027116	2.2189	0.0013321	600.322192530355	110.08	0.46832	110.14	109.97	110.43	0.054062	-0.24025	-0.0022604	NaN	45.972	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	890470			7972	12583	5585	5591							0.0392299655811712
ESSKNSLGKHL	11	Unmodified	_ESSKNSLGKHL_					0	0	0		ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	ENST00000486587.1_1_9:130215832-130215925:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	600.322576	1198.6306	5.4302	0.0032599	-2.8881	-0.0017338	2.5421	0.0015261	600.3207183628562	110.06	0.47302	110.13	109.98	110.45	0.067993	-0.24553	-0.0051857	NaN	45.972	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	809430			7973	12583	5585	5591							0.0392299655811712
ESSSPCGRS	9	Unmodified	_ESSSPCGRS_					0	0	0			REV__ENSG00000100065|ENST00000251973|CARD10	REV__ENSG00000100065|ENST00000251973|CARD10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	455.18890380859375	2	455.190174	908.365795	-2.0486	-0.00093249	-1.6789	-0.00076421	-3.7275	-0.0016967	455.18921243966855	27.923	0.49258	27.923	27.693	28.186	0					33	22	2	0	0	0	0.7932	1	1140	1140		25.574	4.6271	1	54004	+		7974	17133	5586	5592	9168	9168					-0.0920537618715116
ESSSPCGRS	9	Unmodified	_ESSSPCGRS_					0	0	0			REV__ENSG00000100065|ENST00000251973|CARD10	REV__ENSG00000100065|ENST00000251973|CARD10	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	455.190174	908.365795	-2.0486	-0.00093249	-1.6789	-0.00076421	-3.7275	-0.0016967	455.18921243966855	27.923	0.49258	27.923	27.693	28.186	0	-0.045194	0.0013358	NaN	25.574	33	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54004	+		7975	17133	5586	5592							-0.0920537618715116
ESSSPCGRS	9	Unmodified	_ESSSPCGRS_					0	0	0			REV__ENSG00000100065|ENST00000251973|CARD10	REV__ENSG00000100065|ENST00000251973|CARD10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	455.190174	908.365795	-1.2947	-0.00058934	-1.9832	-0.00090275	-3.2779	-0.0014921	455.1891357433028	27.968	0.44239	28.037	27.853	28.296	0.068678	0.068783	0.0010588	NaN	25.574	34	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57792	+		7976	17133	5586	5592							-0.0920537618715116
ESSSPCGRS	9	Unmodified	_ESSSPCGRS_					0	0	0			REV__ENSG00000100065|ENST00000251973|CARD10	REV__ENSG00000100065|ENST00000251973|CARD10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	455.190174	908.365795	0.38318	0.00017442	-4.0704	-0.0018528	-3.6872	-0.0016784	455.18810908137294	27.747	0.38422	27.776	27.549	27.933	0.02817	-0.19268	-0.00084132	NaN	25.574	32	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81607	+		7977	17133	5586	5592							-0.0920537618715116
ESSSPCGRS	9	Unmodified	_ESSSPCGRS_					0	0	0			REV__ENSG00000100065|ENST00000251973|CARD10	REV__ENSG00000100065|ENST00000251973|CARD10	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	455.190174	908.365795	-1.37	-0.00062363	-2.0252	-0.00092187	-3.3953	-0.0015455	455.18901088042935	28.351	0.40843	28.254	28.049	28.458	-0.096947	0.28622	0.0010205	NaN	25.574	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54823	+		7978	17133	5586	5592							-0.0920537618715116
ESTEKPLV	8	Unmodified	_ESTEKPLV_					0	0	0			REV__ENSG00000166450|ENST00000389286|PRTG	REV__ENSG00000166450|ENST00000389286|PRTG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.7456970214844	2	451.745108	901.475663	-1.3354	-0.00060327	3.1446	0.0014206	1.8092	0.00081728	451.74648679752744	34.552	0.77399	34.59	34.166	34.94	0.038643					54	31	2	0	0	0	0.88944	1	1747	1747		57.811	4.4598	1	190450	+		7979	21295	5587	5593	9169	9169					0.020983724236771195
ESTELRRVG	9	Unmodified	_ESTELRRVG_					0	0	0			REV__ENSG00000071246|ENST00000167106|VASH1	REV__ENSG00000071246|ENST00000167106|VASH1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.30322265625	2	523.783087	1045.55162	1.0629	0.00055673	-0.43417	-0.00022741	0.62873	0.00032932	523.7821466932177	87.038	0.3475	87.094	86.954	87.302	0.055649					10	7	2	0	0	0	0.20789	1	8892	8892		16.473	4.2663	1	54001	+		7980	16625	5588	5594	9170	9170					0.030667693238001448
ESTGKKAT	8	Unmodified	_ESTGKKAT_					0	0	0			REV__nc|ENSG00000156931|Q8N3P4-2|VPS8	REV__nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	411.2191162109375	2	411.2218	820.429047	0.94508	0.00038864	-2.7059	-0.0011127	-1.7609	-0.0007241	411.2196388652758	87.306	2.4467	87.232	85.148	87.595	-0.074005					79	56	3	0	0	0	0.86677	1	9025	9025		27.882	3.3782	1	231570	+		7981	20517	5589	5595	9171	9171					0.01164932592371315
ESVAEPETEP	10	Unmodified	_ESVAEPETEP_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.347412109375	2	544.243126	1086.4717	-0.28011	-0.00015245	0.7884	0.00042908	0.50829	0.00027664	544.243505321411	80.134	0.67406	80.661	80.19	80.864	0.52676					29	15	3	0	0	0	0.37624	1	9218	9218		19.997	5.1319	1	302090	+		7982	20414	5590	5596	9172	9172					-0.06807761860704886
ESVAEPETEP	10	Unmodified	_ESVAEPETEP_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	544.243126	1086.4717	-0.76959	-0.00041885	1.3572	0.00073867	0.58764	0.00031982	544.2436105824711	80.195	0.67552	80.611	80.168	80.843	0.41621	-0.025056	0.00031475	NaN	19.997	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	268210	+		7983	20414	5590	5596							-0.06807761860704886
ESVALRLR	8	Unmodified	_ESVALRLR_					0	0	0		ENST00000488261.6_3_10:135271820-135304727:+|nuORF;ENST00000482993.6_3_10:135273418-135278483:+|nuORF;ENSG00000214279|ENST00000640237|SCART1	ENST00000488261.6_3_10:135271820-135304727:+|nuORF	ENST00000488261.6_3_10:135271820-135304727:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.28839111328125	2	472.287808	942.561064	2.1469	0.001014	-2.0547	-0.00097039	0.092286	4.3586E-05	472.2867264071782	114.66	1.2655	114.67	114.37	115.64	0.0094528					102	61	2	0	0	0	0.81548	1	13885	13885		20.482	0	1	83672			7984	12619	5591	5597	9173	9173					0.0874858239999412
ESVELPLTH	9	Unmodified	_ESVELPLTH_					0	0	0		ENST00000396338.3_1_12:18845807-18846413:+|nuORF;ENST00000405257.1_1_6:4703010-4703685:+|nuORF;nc|ENSG00000100764|P62191-2|PSMC1;ENSG00000100764|ENST00000261303|PSMC1	ENST00000396338.3_1_12:18845807-18846413:+|nuORF	ENST00000396338.3_1_12:18845807-18846413:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.7695922851562	2	512.769114	1023.52368	-0.0082937	-4.2528E-06	1.4585	0.00074787	1.4502	0.00074362	512.7695513621228	30.134	0.87141	30.091	29.824	30.696	-0.043095					46	20	4	0	0	0	0.43338	1	1631	1631		55.504	2.1528	1	166890			7985	1868	5592	5598	9174	9174					0.01285446343717922
ESVIARSAK	9	Unmodified	_ESVIARSAK_					0	0	0		nc|ENSG00000185658|Q9NSI6-3|BRWD1;ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1;ENST00000473813.1_1_21:40582792-40590527:-|nuORF	nc|ENSG00000185658|Q9NSI6-3|BRWD1	nc|ENSG00000185658|Q9NSI6-3|BRWD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.22271728515625	2	480.777274	959.539994	-2.948	-0.0014173	2.6534	0.0012757	-0.29454	-0.00014161	480.7784225635661	38.663	0.40041	38.674	38.492	38.893	0.011173					11	8	2	0	0	0	0.20789	1	2644	2644		31.53	0	1	37812			7986	7732	5593	5599	9175	9175					0.05860572300480271
ESVILKSH	8	Unmodified	_ESVILKSH_					0	0	0			REV__ENSG00000005187|ENST00000289416|ACSM3	REV__ENSG00000005187|ENST00000289416|ACSM3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30181884765625	2	456.761092	911.507631	-1.9444	-0.00088814	2.4902	0.0011374	0.54575	0.00024928	456.7621161931215	34.581	0.56604	34.581	34.339	34.905	0					23	14	2	0	0	0	0.4196	1	1878	1878		15.642	0	1	54298	+		7987	16078	5594	5600	9176	9176					0.04833784897482474
ESVLIKRSTG	10	Unmodified	_ESVLIKRSTG_					0	0	0			REV__ENSG00000162337|ENST00000294304|LRP5	REV__ENSG00000162337|ENST00000294304|LRP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.320068359375	2	545.316763	1088.61897	-1.4651	-0.00079892	1.2838	0.00070007	-0.18127	-9.8847E-05	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.8651	1	8545	8545		25.574	0	1	4998200	+		7988	20804	5595	5601	9177	9177					0.07820799534761136
ESVTGHLLY	9	Unmodified	_ESVTGHLLY_					0	0	0			REV__nc|ENSG00000154719|Q9NYK5-2|MRPL39	REV__nc|ENSG00000154719|Q9NYK5-2|MRPL39	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.7627258300781	2	509.763832	1017.51311	0.11756	5.9929E-05	-0.80509	-0.00041041	-0.68753	-0.00035048	509.76323659133084	49.029	0.79582	49.023	48.693	49.489	-0.0056419					37	17	3	0	0	0	0.43338	1	4079	4079		55.504	7.5886	1	403370	+		7989	29944	5596	5602	9178	9178					0.005054636892964481
ESVVHESKPK	10	Unmodified	_ESVVHESKPK_					0	0	0			REV__ENST00000471370.5_1_12:58008307-58008397:+|nuORF	REV__ENST00000471370.5_1_12:58008307-58008397:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.3080444335938	2	570.306395	1138.59824	-0.16092	-9.1776E-05	3.5148	0.0020045	3.3539	0.0019127	570.3083036686676	64.896	0.81548	65.282	64.863	65.678	0.38615					33	19	2	0	0	0	0.82886	1	7013	7013		37.812	1.3648	1	518300	+		7990	23816	5597	5603	9179	9179					0.034482091550898986
ESVYVGSA	8	Unmodified	_ESVYVGSA_					0	0	0			REV__ENST00000464356.6_2_1:156435368-156435647:-|nuORF	REV__ENST00000464356.6_2_1:156435368-156435647:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.24859619140625	2	406.195251	810.375948	-1.2469	-0.00050649	-0.57034	-0.00023167	-1.8173	-0.00073816	406.19534509755664	88.308	0.67114	88.771	88.517	89.188	0.46312					31	16	3	0	0	0	0.4196	1	10480	10480		17.365	0	1	264260	+		7991	27091	5598	5604	9180	9180					-0.036824451902703004
ESWLKLLGSG	10	Unmodified	_ESWLKLLGSG_					0	0	0			REV__ENST00000276569.7_1_8:66539639-66546356:-|nuORF	REV__ENST00000276569.7_1_8:66539639-66546356:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.4945068359375	2	545.300581	1088.58661	-2.0976	-0.0011438	0.82849	0.00045178	-1.2691	-0.00069202	545.3009545117	42.967	0.44415	43.664	43.463	43.908	0.69754					18	10	2	0	0	0	0.37624	1	3873	3873		44.377	19.858	1	638710	+		7992	24583	5599	5605	9181	9181					0.0458601213174461
ETAEKLHL	8	Unmodified	_ETAEKLHL_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7604064941406	2	470.758549	939.502546	-0.24717	-0.00011636	0.22968	0.00010812	-0.017489	-8.2329E-06	470.7583399358159	32.056	0.76422	32.005	31.731	32.495	-0.051033					21	16	2	0	0	0	0.88601	1	1866	1866		34.173	1.3601	1	34004	+		7993	22575	5600	5606	9182	9182					0.030374810348689607
ETAEKLHL	8	Unmodified	_ETAEKLHL_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	470.758549	939.502546	0.12664	5.9619E-05	-0.034973	-1.6464E-05	0.091672	4.3155E-05	470.7583453072618	32.034	0.63717	32.045	31.579	32.216	0.010899	0.020132	-9.038E-05	NaN	34.173	21	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25594	+		7994	22575	5600	5606							0.030374810348689607
ETAEKLHL	8	Unmodified	_ETAEKLHL_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	470.758549	939.502546	-0.24717	-0.00011636	0.22968	0.00010812	-0.017489	-8.2329E-06	470.7583399358159	32.056	0.76422	32.005	31.731	32.495	-0.051033	-0.020132	0.0001588	NaN	34.173	21	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34004	+		7995	22575	5600	5606							0.030374810348689607
ETAIPELK	8	Unmodified	_ETAIPELK_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.7542419433594	2	450.755475	899.496398	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.173	1	80.173	79.673	80.673	0								0	0	0	0.29497	1	7393	7393		34.173	3.6689	1		+		7996	21140	5601	5607	9183	9183					0.042629628033296285
ETAIPELK	8	Unmodified	_ETAIPELK_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7549743652344	2	450.755475	899.496398	-1.264	-0.00056978	-1.5875	-0.00071559	-2.8516	-0.0012854	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.87922	1	7935	7935		31.955	1.4512	1	414240	+		7997	21140	5601	5607	9184	9184					0.042629628033296285
ETAIPELK	8	Unmodified	_ETAIPELK_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7557678222656	2	450.755475	899.496398	0.58167	0.00026219	-3.5127	-0.0015834	-2.9311	-0.0013212	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.884	1	7850	7850		33.516	1.5607	1	285810	+		7998	21140	5601	5607	9185	9185					0.042629628033296285
ETAIRRRK	8	Unmodified	_ETAIRRRK_					0	0	0			REV__ENST00000496567.5_1_9:97782205-97782394:+|nuORF	REV__ENST00000496567.5_1_9:97782205-97782394:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3138427734375	2	515.317432	1028.62031	1.0131	0.00052207	-3.1117	-0.0016035	-2.0985	-0.0010814	515.315521585454	22.579	1.1035	22.16	21.833	22.936	-0.41879					55	25	3	0	0	0	0.87922	1	941	941		31.955	1.4512	1	227930	+		7999	27753	5602	5608	9186	9186					0.10714478414161022
ETANKLLIN	9	Unmodified	_ETANKLLIN_					0	0	0			REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.31121826171875	2	508.292756	1014.57096	-0.76801	-0.00039037	0.10485	5.3293E-05	-0.66316	-0.00033708	508.29302766718	61.735	0.87611	62.123	61.745	62.622	0.38846					46	19	3	0	0	0	0.20789	1	6616	6616		49.442	16.629	1	167880	+		8000	23012	5603	5609	9187	9187					0.06425725614724342
ETAPILTALDI	11	Unmodified	_ETAPILTALDI_					0	0	0		nc|ENSG00000115592|Q9UGI9-2|PRKAG3;ENSG00000115592|ENST00000439262|PRKAG3	nc|ENSG00000115592|Q9UGI9-2|PRKAG3	nc|ENSG00000115592|Q9UGI9-2|PRKAG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.825439453125	2	578.826629	1155.63871	-0.93209	-0.00053952	-1.8449	-0.0010679	-2.777	-0.0016074	578.8254397838805	65.358	0.41475	65.362	65.139	65.554	0.0046997					31	18	2	0	0	0	0.7144	1	6142	6142		29.17	2.4771	1	350700			8001	2858	5604	5610	9188	9188					0.06711130754842998
ETARVPAPVEI	11	Unmodified	_ETARVPAPVEI_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.80908203125	2	591.32987	1180.64519	-2.5468	-0.001506	-2.5288	-0.0014953	-5.0756	-0.0030014	591.3288056911452	59.804	0.18574	59.837	59.691	59.877	0.032825					5	4	2	0	0	0	0.055351	1	5543	5543		95.815	5.4453	1	25510			8002	5333;15007	5605	5611	9189	9189					0.0620906870624367
ETASPLPR	8	Unmodified	_ETASPLPR_					0	0	0		ENST00000261813.8_1_5:139625066-139625549:-|nuORF	ENST00000261813.8_1_5:139625066-139625549:-|nuORF	ENST00000261813.8_1_5:139625066-139625549:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7801208496094	2	435.737617	869.460681	-1.6336	-0.00071182	1.9683	0.00085768	0.33473	0.00014586	435.7384761516027	36.193	0.52086	36.224	35.994	36.515	0.031132					21	13	2	0	0	0	0.4196	1	1999	1999		42.474	14.592	1	90146			8003	9419	5606	5612	9190	9190					0.02072925346340071
ETATAVAETI	10	Unmodified	_ETATAVAETI_					0	0	0			REV__nc|ENSG00000257923|P39880-9|CUX1	REV__nc|ENSG00000257923|P39880-9|CUX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.25970458984375	2	503.258579	1004.50261	-1.1687	-0.00058817	-1.8385	-0.00092525	-3.0072	-0.0015134	503.2575065498018	43.503	0.51412	43.953	43.686	44.2	0.45025					31	12	3	0	0	0	0.344	1	3938	3938		68.787	5.253	1	1314400	+		8004	28737	5607	5613	9191	9191					0.0005343624420675042
ETATAVAETI	10	Unmodified	_ETATAVAETI_					0	0	0			REV__nc|ENSG00000257923|P39880-9|CUX1	REV__nc|ENSG00000257923|P39880-9|CUX1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	503.258579	1004.50261	-1.1687	-0.00058817	-1.8385	-0.00092525	-3.0072	-0.0015134	503.2575065498018	43.503	0.51412	43.953	43.686	44.2	0.45025	0.17082	0.00094898	NaN	68.787	31	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1314400	+		8005	28737	5607	5613							0.0005343624420675042
ETATAVAETI	10	Unmodified	_ETATAVAETI_					0	0	0			REV__nc|ENSG00000257923|P39880-9|CUX1	REV__nc|ENSG00000257923|P39880-9|CUX1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	503.258579	1004.50261	-1.4194	-0.00071434	-9.0575	-0.0045583	-10.477	-0.0052726	503.25303022828325	42.914	0.36818	43.612	43.422	43.79	0.69754	-0.17082	-0.006317	NaN	68.787	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85286	+		8006	28737	5607	5613							0.0005343624420675042
ETCFRLRYPSC	11	Unmodified	_ETCFRLRYPSC_					0	0	0		ENST00000466373.1_1_22:19439515-19452862:-|nuORF	ENST00000466373.1_1_22:19439515-19452862:-|nuORF	ENST00000466373.1_1_22:19439515-19452862:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.8798828125	3	458.881285	1373.62203	0.16817	7.717E-05	-3.4945	-0.0016036	-3.3264	-0.0015264	458.87974610162627	17.249	0.45489	16.638	16.475	16.929	-0.6107					31	9	5	0	0	0	0.69687	1	234	234		32.034	4.3902	1	716260			8007	12132	5608	5614	9192	9192					-0.049840166743706504
ETDEQKEV	8	Unmodified	_ETDEQKEV_					0	0	0			REV__ENSG00000065526|ENST00000375759|SPEN	REV__ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.2244567871094	2	489.224736	976.43492	-0.25906	-0.00012674	0.15253	7.4619E-05	-0.10654	-5.2121E-05	489.2247267397948	23.026	1.1274	22.974	22.425	23.553	-0.052114					69	38	3	0	0	0	0.92394	1	780	780		47.657	3.2801	1	180890	+		8008	16503	5609	5615	9193	9193					-0.05424013686604212
ETDKNGFLQY	10	Unmodified	_ETDKNGFLQY_					0	0	0		ENSG00000106733|ENST00000361092|NMRK1;nc|ENSG00000106733|Q9NWW6-2|NMRK1	ENSG00000106733|ENST00000361092|NMRK1	ENSG00000106733|ENST00000361092|NMRK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	607.7882690429688	2	607.788035	1213.56152	-0.38599	-0.0002346	0.47772	0.00029035	0.091729	5.5752E-05	607.7881557256275	54.021	0.70257	54.015	53.685	54.388	-0.0053673					47	21	3	0	0	0	0.017804	3	4757	4749;4757;4765		124.08	35.077	1	445300			8009	2315	5610	5616	9194;9195;9196	9195					-0.03672087461472984
ETDKNGFLQY	10	Unmodified	_ETDKNGFLQY_					0	0	0		ENSG00000106733|ENST00000361092|NMRK1;nc|ENSG00000106733|Q9NWW6-2|NMRK1	ENSG00000106733|ENST00000361092|NMRK1	ENSG00000106733|ENST00000361092|NMRK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	607.7880859375	2	607.788035	1213.56152	-0.25303	-0.00015379	0.21448	0.00013036	-0.038558	-2.3435E-05	607.7880797502846	53.931	0.67444	53.906	53.602	54.277	-0.02475					42	16	3	0	0	0	0.00061085	4	4845	4824;4834;4845;4857		139.97	41.341	1	464060			8010	2315	5610	5616	9197;9198;9199;9200	9199					-0.03672087461472984
ETDKNGFLQY	10	Unmodified	_ETDKNGFLQY_					0	0	0		ENSG00000106733|ENST00000361092|NMRK1;nc|ENSG00000106733|Q9NWW6-2|NMRK1	ENSG00000106733|ENST00000361092|NMRK1	ENSG00000106733|ENST00000361092|NMRK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	607.7876586914062	2	607.788035	1213.56152	-0.99677	-0.00060583	1.1798	0.00071707	0.18302	0.00011124	607.7886398141796	54.019	0.6017	54.041	53.745	54.346	0.022537					41	16	3	0	0	0	9.0156E-07	4	4787	4764;4775;4787;4797		148.99	61.29	1	517990			8011	2315	5610	5616	9201;9202;9203;9204	9203					-0.03672087461472984
ETDKNGFLQY	10	Unmodified	_ETDKNGFLQY_					0	0	0		ENSG00000106733|ENST00000361092|NMRK1;nc|ENSG00000106733|Q9NWW6-2|NMRK1	ENSG00000106733|ENST00000361092|NMRK1	ENSG00000106733|ENST00000361092|NMRK1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	607.788035	1213.56152	1.0104	0.0006141	-0.96827	-0.0005885	0.042107	2.5592E-05	607.787399295442	53.985	0.33148	54.033	53.889	54.221	0.047806	0.033679	-0.0019499	NaN	148.99	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61782			8012	2315	5610	5616							-0.03672087461472984
ETDRGMSAEY	10	Unmodified	_ETDRGMSAEY_					0	0	0		ENSG00000100347|ENST00000350028|SAMM50	ENSG00000100347|ENST00000350028|SAMM50	ENSG00000100347|ENST00000350028|SAMM50	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.7403564453125	2	579.740228	1157.4659	-0.88329	-0.00051208	1.1725	0.00067972	0.28917	0.00016764	579.740688392729	35.11	0.53166	35.098	34.849	35.381	-0.012203					28	13	3	0	0	0	0.74274	1	2161	2161		42.396	1.8235	1	140870			8013	1831	5611	5617	9205	9205					-0.10653183643989905
ETDSPLKKEA	10	Unmodified	_ETDSPLKKEA_					0	0	0			REV__nc|ENSG00000115310|Q9NQC3-4|RTN4	REV__nc|ENSG00000115310|Q9NQC3-4|RTN4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.267333984375	2	559.290411	1116.56627	-0.0030226	-1.6905E-06	0.55777	0.00031195	0.55475	0.00031026	559.2905806470195	31.712	0.59843	31.792	31.428	32.026	0.079834					19	13	2	0	0	0	0.37624	1	2194	2194		32.812	0	1	174280	+		8014	18108	5612	5618	9206	9206					0.012647966812892264
ETEGREHWKW	10	Unmodified	_ETEGREHWKW_					0	0	0		ENST00000568686.1_1_3:44161580-44161658:+|nuORF	ENST00000568686.1_1_3:44161580-44161658:+|nuORF	ENST00000568686.1_1_3:44161580-44161658:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.8807678222656	3	453.214309	1356.6211	0.91108	0.00041291	0.35777	0.00016215	1.2689	0.00057506	453.2143478719775	17.551	0.13477	17.469	17.387	17.522	-0.0821					8	5	2	0	0	0	0.37624	1	236	236		29.551	6.9892	1	25133			8015	13965	5613	5619	9207	9207					-0.042947717274500974
ETEGREHWKW	10	Unmodified	_ETEGREHWKW_					0	0	0		ENST00000568686.1_1_3:44161580-44161658:+|nuORF	ENST00000568686.1_1_3:44161580-44161658:+|nuORF	ENST00000568686.1_1_3:44161580-44161658:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	453.214309	1356.6211	-0.36229	-0.0001642	0.89345	0.00040492	0.53116	0.00024073	453.2146259537903	17.498	0.25553	17.419	17.304	17.56	-0.079054	-0.025251	0.00022841	NaN	29.551	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32019			8016	13965	5613	5619							-0.042947717274500974
ETELDGLRY	9	Unmodified	_ETELDGLRY_					0	0	0		nc|ENSG00000162882|P46952-2|HAAO;ENST00000402698.6_1_2:42997631-43019676:-|nuORF;ENSG00000162882|ENST00000294973|HAAO	nc|ENSG00000162882|P46952-2|HAAO	nc|ENSG00000162882|P46952-2|HAAO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.267578125	2	548.269478	1094.5244	-0.46027	-0.00025235	0.808	0.000443	0.34772	0.00019065	548.2698173126827	56.817	0.58366	56.805	56.657	57.241	-0.012203					40	19	3	0	0	0	0.024351	4	5114	5103;5114;5126;5136		122.18	56.373	1	497510			8017	5745	5614	5620	9208;9209;9210;9211	9209					-0.019077590072356543
ETELDGLRY	9	Unmodified	_ETELDGLRY_					0	0	0		nc|ENSG00000162882|P46952-2|HAAO;ENST00000402698.6_1_2:42997631-43019676:-|nuORF;ENSG00000162882|ENST00000294973|HAAO	nc|ENSG00000162882|P46952-2|HAAO	nc|ENSG00000162882|P46952-2|HAAO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.2685546875	2	548.269478	1094.5244	0.44692	0.00024503	-0.016099	-8.8266E-06	0.43082	0.0002362	548.2692278334891	56.848	0.57249	56.819	56.583	57.156	-0.028664					41	18	3	0	0	0	0.19818	2	5209	5209;5218		74.255	29.481	1	503700			8018	5745	5614	5620	9212;9213	9212					-0.019077590072356543
ETELDGLRY	9	Unmodified	_ETELDGLRY_					0	0	0		nc|ENSG00000162882|P46952-2|HAAO;ENST00000402698.6_1_2:42997631-43019676:-|nuORF;ENSG00000162882|ENST00000294973|HAAO	nc|ENSG00000162882|P46952-2|HAAO	nc|ENSG00000162882|P46952-2|HAAO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.2694702148438	2	548.269478	1094.5244	-0.14311	-7.8461E-05	0.78346	0.00042954	0.64035	0.00035108	548.2696846380971	56.821	0.51545	56.854	56.648	57.163	0.033184					33	15	3	0	0	0	0.15959	3	5135	5135;5144;5153		82.241	32.799	1	520600			8019	5745	5614	5620	9214;9215;9216	9214					-0.019077590072356543
ETELDGSG	8	Unmodified	_ETELDGSG_					0	0	0			REV__ENST00000526990.1_1_11:65349145-65351290:+|nuORF	REV__ENST00000526990.1_1_11:65349145-65351290:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.1709289550781	2	404.171973	806.329392	-1.8319	-0.00074042	-2.7196	-0.0010992	-4.5516	-0.0018396	404.17089024317255	78.364	3.0861	78.491	77.697	80.783	0.12695					160	99	2	0	0	0	0.84341	1	7479	7479		24.203	2.5004	1	7642900	+		8020	21924	5615	5621	9217	9217					-0.08151929812208891
ETELKVHLKL	10	Unmodified	_ETELKVHLKL_					0	0	0		nc|ENSG00000149639|O94964-4|MTCL2;nc|ENSG00000149639|O94964-1|MTCL2;ENSG00000149639|ENST00000237536|SOGA1	nc|ENSG00000149639|O94964-4|MTCL2	nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.91021728515625	3	403.911568	1208.71287	-0.34293	-0.00013851	-3.0849	-0.001246	-3.4279	-0.0013846	403.9102188126006	68.233	2.7499	68.781	67.193	69.943	0.54819					138	70	3	0	0	0	0.86698	1	7500	7500		28.081	2.0181	1	253300			8021	5042	5616	5622	9218	9218					0.11686518637020527
ETEQLREQS	9	Unmodified	_ETEQLREQS_					0	0	0		nc|ENSG00000177685|Q8N4Y2-2|CRACR2B;ENST00000530688.5_1_11:829331-830866:+|nuORF;nc|ENSG00000177685|Q8N4Y2-3|CRACR2B;ENSG00000177685|ENST00000525077|CRACR2B;ENST00000527763.5_1_11:829331-831706:+|nuORF	nc|ENSG00000177685|Q8N4Y2-2|CRACR2B	nc|ENSG00000177685|Q8N4Y2-2|CRACR2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8252563476562	2	560.267467	1118.52038	1.0644	0.00059632	1.2925	0.00072414	2.3568	0.0013205	560.2693440540564	50.583	1.1861	51.334	50.961	52.147	0.75174					36	28	2	0	0	0	0.20789	1	5012	5012		42.396	0	1	831940			8022	7155	5617	5623	9219	9219					-0.034138485009407304
ETEQRIAEQT	10	Unmodified	_ETEQRIAEQT_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	602.7974243164062	2	602.793849	1203.57314	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.141	1	21.209	20.709	21.709	0.068251								0	0	0	0.45132	1	542	542		34.173	2.6427	1		+		8023	20437;29946;29947	5618	5624	9220	9220					-0.02049890438138391
ETFDAGLQAF	10	Unmodified	_ETFDAGLQAF_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.759033203125	2	549.758746	1097.50294	-0.7795	-0.00042854	0.9069	0.00049857	0.1274	7.0038E-05	549.7591000090923	80.923	0.73886	80.923	80.567	81.306	0					58	23	3	0	0	0	0.14384	4	7492	7474;7484;7492;7510		95.815	31.608	1	500410			8024	8189	5619	5625	9221;9222;9223;9224	9223					-0.04191144035939942
ETFNTPAMY	9	Oxidation (M)	_ETFNTPAM(Oxidation (M))Y_		ETFNTPAM(1)Y		ETFNTPAM(56)Y	0	0	1		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000587663.1_1_18:60109485-60109668:+|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.732421875	2	545.231507	1088.44846	-0.020881	-1.1385E-05	-0.021893	-1.1937E-05	-0.042774	-2.3322E-05	545.2312988188335	55.879	0.52076	55.91	55.594	56.114	0.030838					27	13	3	0	0	0	0.43338	1	5037	5037		55.504	18.345	1	154810			8025	1338;8080;8106	5620	5626	9225	9225		23			-0.09222479179038601
ETFNTPAMY	9	Oxidation (M)	_ETFNTPAM(Oxidation (M))Y_		ETFNTPAM(1)Y		ETFNTPAM(41)Y	0	0	1		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000587663.1_1_18:60109485-60109668:+|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.2286987304688	2	545.231507	1088.44846	0.0885	4.8253E-05	0.21887	0.00011933	0.30737	0.00016759	545.231425751193	55.954	0.56541	56.018	55.707	56.273	0.063725					47	26	2	0	0	0	0.69624	1	4708	4708		40.778	7.2626	1	251590			8026	1338;8080;8106	5620	5626	9226	9226		23			-0.09222479179038601
ETFNTPAMY	9	Oxidation (M)	_ETFNTPAM(Oxidation (M))Y_		ETFNTPAM(1)Y		ETFNTPAM(88)Y	0	0	1		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000587663.1_1_18:60109485-60109668:+|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.2293090820312	2	545.231507	1088.44846	0.44189	0.00024093	-0.56171	-0.00030626	-0.11981	-6.5325E-05	545.2310178809672	55.861	0.48043	55.96	55.725	56.206	0.099186					35	18	2	0	0	0	0.12652	3	4701	4686;4692;4701		87.754	27.46	1	231730			8027	1338;8080;8106	5620	5626	9227;9228;9229	9229		23			-0.09222479179038601
ETFNTPAMY	9	Oxidation (M)	_ETFNTPAM(Oxidation (M))Y_		ETFNTPAM(1)Y		ETFNTPAM(79)Y	0	0	1		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000587663.1_1_18:60109485-60109668:+|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.7333984375	2	545.231507	1088.44846	-0.32548	-0.00017746	0.21251	0.00011587	-0.11297	-6.1595E-05	545.2313743460636	55.86	0.50243	55.823	55.56	56.063	-0.036823					42	19	3	0	0	0	0.17307	3	4706	4696;4706;4709		79.451	26.1	1	216120			8028	1338;8080;8106	5620	5626	9230;9231;9232	9231		23			-0.09222479179038601
ETFNTPAMY	9	Oxidation (M)	_ETFNTPAM(Oxidation (M))Y_					0	0	1		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000587663.1_1_18:60109485-60109668:+|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	545.231507	1088.44846	-0.29447	-0.00016056	0.22463	0.00012247	-0.069845	-3.8082E-05	545.2315410332889	55.852	0.47709	55.842	55.651	56.128	-0.010136	-0.064049	0.00035997	NaN	87.754	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105100			8029	1338;8080;8106	5620	5626				23			-0.09222479179038601
ETGIRTLKL	9	Unmodified	_ETGIRTLKL_					0	0	0			REV__nc|ENSG00000166912|Q9NXD2-3|MTMR10	REV__nc|ENSG00000166912|Q9NXD2-3|MTMR10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8164672851562	2	515.816399	1029.61824	-0.84121	-0.00043391	0.68623	0.00035397	-0.15498	-7.9943E-05	515.8165313144957	38.843	0.50377	39.397	39.111	39.615	0.55449					25	11	3	0	0	0	0.24527	1	3239	3239		69.628	3.1983	1	321110	+		8030	30006	5621	5627	9233	9233					0.10462004885698661
ETGIRTLKL	9	Unmodified	_ETGIRTLKL_					0	0	0			REV__nc|ENSG00000166912|Q9NXD2-3|MTMR10	REV__nc|ENSG00000166912|Q9NXD2-3|MTMR10	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	515.816399	1029.61824	-0.84121	-0.00043391	0.68623	0.00035397	-0.15498	-7.9943E-05	515.8165313144957	38.843	0.50377	39.397	39.111	39.615	0.55449	0.051675	0.00011385	NaN	69.628	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	321110	+		8031	30006	5621	5627							0.10462004885698661
ETGKEDITL	9	Unmodified	_ETGKEDITL_					0	0	0			REV__CON__P34955	REV__CON__P34955	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.25909423828125	2	503.258579	1004.50261	-1.1687	-0.00058817	-1.8385	-0.00092525	-3.0072	-0.0015134	503.2575065498018	43.503	0.51412	43.953	43.686	44.2	0.45025					31	12	3	0	0	0	0.48102	1	3952	3952		52.937	0.63753	1	1314400	+	+	8032	15990	5622	5628	9234	9234					0.0005343624418401305
ETGKEPHAG	9	Unmodified	_ETGKEPHAG_					0	0	0		ENSG00000047617|ENST00000682330|ANO2;nc|ENSG00000047617|Q9NQ90-2|ANO2;nc|ENSG00000047617|Q9NQ90|ANO2	ENSG00000047617|ENST00000682330|ANO2	ENSG00000047617|ENST00000682330|ANO2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.779541015625	2	463.222331	924.430109	-0.91645	-0.00042452	-0.86044	-0.00039858	-1.7769	-0.0008231	463.22186332880557	38.599	0.12595	39.122	39.036	39.162	0.52235					4	2	2	0	0	0	0.20789	1	3199	3199		39.253	3.6345	1	29632			8033	964	5623	5629	9235	9235					-0.03512853038716912
ETGSMITDAKL	11	Unmodified	_ETGSMITDAKL_					0	0	0			REV__ENST00000442675.1_1_9:5041269-5041823:+|nuORF	REV__ENST00000442675.1_1_9:5041269-5041823:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.2929077148438	2	583.292096	1164.56964	-0.4375	-0.00025519	-3.4386	-0.0020057	-3.8761	-0.0022609	583.2914546218474	75.818	1.4306	76.386	75.46	76.89	0.56836					72	33	4	0	0	0	0.6493	1	8614	8614		38.754	0.94209	1	1497300	+		8034	26772	5624	5630	9236	9236					-0.006062765363594735
ETIERRLH	8	Unmodified	_ETIERRLH_					0	0	0			REV__nc|ENSG00000122966|O14578|CIT	REV__nc|ENSG00000122966|O14578|CIT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8084716796875	2	527.293622	1052.57269	2.4276	0.0012801	-3.2735	-0.0017261	-0.84596	-0.00044607	527.2922259728559	100.49	0.36353	100.84	100.65	101.02	0.34591					9	8	2	0	0	0	0.4196	1	12210	12210		90.777	0	1	207620	+		8035	18521	5625	5631	9237	9237					0.04850779423327367
ETIFAILGPG	10	Unmodified	_ETIFAILGPG_					0	0	0		ENSG00000176182|ENST00000322217|MYPOP	ENSG00000176182|ENST00000322217|MYPOP	ENSG00000176182|ENST00000322217|MYPOP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.2806396484375	2	509.2844	1016.55425	-1.7605	-0.00089661	-2.8071	-0.0014296	-4.5676	-0.0023262	509.2828427904899	37.037	0.53651	37.048	36.704	37.24	0.011177					15	11	2	0	0	0	0.71042	1	2440	2440		44.117	1.7207	1	65869			8036	7061	5626	5632	9238	9238					0.04663224728778914
ETILMSLKK	9	Unmodified	_ETILMSLKK_					0	0	0			REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|47|2|sense	REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|47|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8179931640625	2	531.81501	1061.61547	1.0705	0.00056928	2.5512	0.0013568	3.6216	0.001926	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.55097	1	10589	10589		49.442	12.282	1	4490200	+		8037	29512	5627	5633	9239	9239					0.0871241343654674
ETILVQCNLHQ	11	Unmodified	_ETILVQCNLHQ_					0	0	0		nc|ENSG00000213762|P52741-2|ZNF134	nc|ENSG00000213762|P52741-2|ZNF134	nc|ENSG00000213762|P52741-2|ZNF134	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.22247314453125	3	433.223817	1296.64962	-0.17127	-7.4197E-05	-2.3891	-0.001035	-2.5604	-0.0011092	433.2226408831067	61.937	1.0279	61.927	61.564	62.591	-0.0094147					54	18	4	0	0	0	0.72892	1	5765	5765		26.75	0.85799	1	814390			8038	15249	5628	5634	9240	9240					0.013162098574866832
ETIQALRAN	9	Unmodified	_ETIQALRAN_					0	0	0		nc|ENSG00000134444|Q9P260|RELCH;ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH	nc|ENSG00000134444|Q9P260|RELCH	nc|ENSG00000134444|Q9P260|RELCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2798156738281	2	508.28018	1014.54581	0.22565	0.0001147	-0.11322	-5.7546E-05	0.11244	5.715E-05	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.71772	1	8983	8983		39.253	1.4413	1	1820400			8039	3935	5629	5635	9241	9241					0.03911670812124157
ETIQIWSTPFF	11	Unmodified	_ETIQIWSTPFF_					0	0	0		ENSG00000154265|ENST00000392676|ABCA5;nc|ENSG00000154265|Q8WWZ7-3|ABCA5;ENST00000586995.5_3_17:67249715-67270153:-|nuORF	ENSG00000154265|ENST00000392676|ABCA5;ENST00000586995.5_3_17:67249715-67270153:-|nuORF	ENSG00000154265|ENST00000392676|ABCA5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7932434082031	3	456.899328	1367.67615	1.3315	0.00060836	0.82693	0.00037782	2.1584	0.00098619	456.8994945145643	35.59	0.26537	35.971	35.787	36.053	0.3812					10	6	2	0	0	0	0.1745	1	2738	2738		29.551	9.5203	1	134800			8040	5270;14182	5630	5636	9242	9242					0.0070222202045897575
ETKATVAVY	9	Unmodified	_ETKATVAVY_					0	0	0		ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7961120605469	2	491.266207	980.517862	0.33689	0.0001655	1.2759	0.00062682	1.6128	0.00079232	491.2667793011541	50.093	0.44297	50.136	49.855	50.298	0.042236					13	10	2	0	0	0	0.20789	1	3923	3923		24.519	8.046	1	45698			8041	1521	5631	5637	9243	9243					0.026823478320466165
ETKEASMMEY	10	Unmodified	_ETKEASMMEY_					0	0	0		nc|ENSG00000273749|Q7L576-2|CYFIP1;ENSG00000273749|ENST00000617928|CYFIP1	nc|ENSG00000273749|Q7L576-2|CYFIP1	nc|ENSG00000273749|Q7L576-2|CYFIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	609.755859375	2	609.754489	1217.49443	-0.11336	-6.912E-05	4.1513	0.0025313	4.0379	0.0024621	609.7569821321349	55.248	0.61305	55.221	54.946	55.559	-0.026848					25	14	3	0	0	0	0.77314	1	5039	5039		40.778	4.3314	1	191860			8042	8988	5632	5638	9244	9244					-0.10562202059077208
ETKEGLEQAL	10	Unmodified	_ETKEGLEQAL_					0	0	0		ENSG00000049283|ENST00000268933|EPN3;ENST00000512379.5_1_17:48610205-48619515:+|nuORF	ENSG00000049283|ENST00000268933|EPN3	ENSG00000049283|ENST00000268933|EPN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.2902221679688	2	559.290411	1116.56627	0.71868	0.00040195	-0.58324	-0.0003262	0.13544	7.5751E-05	559.2899645855562	77.204	0.99672	77.609	77.226	78.222	0.40488					70	25	4	0	0	0	0.14207	1	8793	8793		96.034	0.21844	1	3911800			8043	984	5633	5639	9245	9245					0.012647966812892264
ETKELIDYL	9	Unmodified	_ETKELIDYL_					0	0	0			REV__L1ME1_dup14741|chr8:25510836-25512219:-|5.542688985801943|0.2188578600898351|4.66|63.0|62|3|sense	REV__L1ME1_dup14741|chr8:25510836-25512219:-|5.542688985801943|0.2188578600898351|4.66|63.0|62|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.757568359375	2	562.297704	1122.58086	-0.48232	-0.00027121	2.3059	0.0012966	1.8236	0.0010254	562.2991390056559	47.631	0.5309	48.1	47.855	48.386	0.46941					23	13	2	0	0	0	0.20789	1	4562	4562		14.137	0	1	489680	+		8044	29533	5634	5640	9246	9246					0.024468688294291496
ETKEYFESW	9	Unmodified	_ETKEYFESW_					0	0	0		nc|ENSG00000001630|Q16850-2|CYP51A1;ENSG00000001630|ENST00000003100|CYP51A1	nc|ENSG00000001630|Q16850-2|CYP51A1	nc|ENSG00000001630|Q16850-2|CYP51A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	609.767822265625	2	609.769311	1217.52407	-0.74221	-0.00045258	1.2267	0.00074799	0.48447	0.00029541	609.7696820071974	61.675	0.62397	61.675	61.543	62.167	0					65	29	3	0	0	0	4.5757E-05	1	5399	5399		150.36	76.387	1	547960			8045	651	5635	5641	9247	9247					-0.0759917872708229
ETKKKFTL	8	Unmodified	_ETKKKFTL_					0	0	0			REV__ENSG00000154783|ENST00000285046|FGD5	REV__ENSG00000154783|ENST00000285046|FGD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.8006591796875	2	497.800217	993.585882	-1.7144	-0.00085342	1.4379	0.00071578	-0.27651	-0.00013765	497.8007994469304	69.145	0.62259	69.178	68.849	69.472	0.033005					71	28	3	0	0	0	0.89043	1	6635	6635		35.618	1.4457	1	392890	+		8046	20401	5636	5642	9248	9248					0.0888321748270755
ETKKYLTY	8	Unmodified	_ETKKYLTY_					0	0	0			REV__chr14:23970332-23982495|37|53.43|0.78|6.1|+|1|TE_info:L1PA7,L1PA7_dup11225,L1,LINE,acceptor,+,23982495,23984046|DHRS4L2,None|6	REV__chr14:23970332-23982495|37|53.43|0.78|6.1|+|1|TE_info:L1PA7,L1PA7_dup11225,L1,LINE,acceptor,+,23982495,23984046|DHRS4L2,None|6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7427368164062	2	523.281857	1044.54916	0.077445	4.0526E-05	-4.1744	-0.0021844	-4.0969	-0.0021438	523.2795796450511	49.099	0.6479	49.559	49.223	49.871	0.45983					20	14	2	0	0	0	0.4196	1	4745	4745		31.53	6.0796	1	731800	+		8047	15589	5637	5643	9249	9249					0.02866920866131295
ETKLFLAGKSA	11	Unmodified	_ETKLFLAGKSA_					0	0	0			REV__ENST00000566466.1_1_16:68403009-68404965:-|nuORF	REV__ENST00000566466.1_1_16:68403009-68404965:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.8333129882812	2	582.834788	1163.65502	-0.40612	-0.0002367	-3.2681	-0.0019048	-3.6742	-0.0021415	582.832911894326	94.456	2.7605	94.456	93.622	96.382	0					111	64	3	0	0	0	0.7434	1	9412	9412		23.523	1.5628	1	367730	+		8048	28869	5638	5644	9250	9250					0.07974256711622729
ETKLFLAGKSA	11	Unmodified	_ETKLFLAGKSA_					0	0	0			REV__ENST00000566466.1_1_16:68403009-68404965:-|nuORF	REV__ENST00000566466.1_1_16:68403009-68404965:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8328247070312	2	582.834788	1163.65502	0.11318	6.5963E-05	-3.7555	-0.0021889	-3.6424	-0.0021229	582.8325626554922	94.252	3.4585	94.298	93.323	96.781	0.046173					208	81	3	0	0	0	0.72739	1	9986	9986		27.047	1.4733	1	743970	+		8049	28869	5638	5644	9251	9251					0.07974256711622729
ETKLLLRRLP	10	Unmodified	_ETKLLLRRLP_					0	0	0		chr20:57498701-57503436|14|13.29|0.32|5.38|-|0|CTCFL,CTCFL|1	chr20:57498701-57503436|14|13.29|0.32|5.38|-|0|CTCFL,CTCFL|1	chr20:57498701-57503436|14|13.29|0.32|5.38|-|0|CTCFL,CTCFL|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2675476074219	3	413.602957	1237.78704	-0.49318	-0.00020398	4.0193	0.0016624	3.5262	0.0014584	413.6049143078882	48.154	0.43714	48.061	47.772	48.209	-0.093178					12	10	2	0	0	0	0.37624	1	3632	3632		14.086	0	1	60032			8050	367	5639	5645	9252	9252					0.17765906519230157
ETKNHTTH	8	Unmodified	_ETKNHTTH_					0	0	0		ENST00000473590.2_1_5:13638449-13638488:-|nuORF	ENST00000473590.2_1_5:13638449-13638488:-|nuORF	ENST00000473590.2_1_5:13638449-13638488:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.23309326171875	2	484.23323	966.451907	-1.0767	-0.00052137	1.1521	0.00055789	0.075415	3.6518E-05	484.23364192345355	22.339	2.0122	22.281	21.689	23.702	-0.057203					170	78	4	0	0	0	0.67263	1	668	668		68.485	7.5128	1	1074300			8051	12286	5640	5646	9253	9253					-0.03266048290163326
ETKNHTTH	8	Unmodified	_ETKNHTTH_					0	0	0		ENST00000473590.2_1_5:13638449-13638488:-|nuORF	ENST00000473590.2_1_5:13638449-13638488:-|nuORF	ENST00000473590.2_1_5:13638449-13638488:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.232666015625	2	484.23323	966.451907	0.53423	0.00025869	-0.66811	-0.00032352	-0.13388	-6.4827E-05	484.2328344963672	23.219	1.5737	22.644	22.068	23.641	-0.57415					75	37	3	0	0	0	0.5397	1	1035	1035		73.975	7.5455	1	1837400			8052	12286	5640	5646	9254	9254					-0.03266048290163326
ETKSENGVKV	10	Unmodified	_ETKSENGVKV_					0	0	0		nc|ENSG00000165671|Q96L73-3|NSD1;ENSG00000165671|ENST00000439151|NSD1;ENST00000602285.1_1_5:176562104-176563088:+|nuORF	nc|ENSG00000165671|Q96L73-3|NSD1	nc|ENSG00000165671|Q96L73-3|NSD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.79052734375	2	545.790578	1089.5666	0.29927	0.00016334	-0.056464	-3.0817E-05	0.2428	0.00013252	545.7903436571286	56.644	0.98027	57.204	56.832	57.812	0.55954					46	22	4	0	0	0	0.30722	1	5889	5889		71.877	1.0613	1	1213700			8053	6108	5641	5647	9255	9255					0.0254021640114388
ETKVHRGT	8	Unmodified	_ETKVHRGT_					0	0	0		ENSG00000149043|ENST00000341958|SYT8;ENST00000424556.2_1_11:1856509-1858658:+|nuORF;ENST00000479276.5_1_11:1857361-1857613:+|nuORF	ENSG00000149043|ENST00000341958|SYT8	ENSG00000149043|ENST00000341958|SYT8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.25482177734375	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.87064	1	9853	9853		29.15	0.89528	1	1215000			8054	4992	5642	5648	9256	9256					0.027191324691784757
ETLGVIKI	8	Unmodified	_ETLGVIKI_					0	0	0			REV__nc|ENSG00000090889|O95239-2|KIF4A	REV__nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77374267578125	2	436.776211	871.537869	-1.6314	-0.00071254	-4.1235	-0.001801	-5.7548	-0.0025136	436.7743489325011	26.574	0.4584	26.641	26.356	26.815	0.066877					33	21	2	0	0	0	0.79929	1	1004	1004		18.324	0	1	119400	+		8055	29725	5643	5649	9257	9257					0.0969614356264401
ETLGVIKI	8	Unmodified	_ETLGVIKI_					0	0	0			REV__nc|ENSG00000090889|O95239-2|KIF4A	REV__nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77374267578125	2	436.776211	871.537869	-1.6287	-0.0007114	-3.9688	-0.0017335	-5.5976	-0.0024449	436.7743504876495	26.927	0.91903	26.994	26.723	27.642	0.066877					84	43	3	0	0	0	0.87479	1	1047	1047		30.504	2.2494	1	198510	+		8056	29725	5643	5649	9258	9258					0.0969614356264401
ETLHYQNL	8	Unmodified	_ETLHYQNL_					0	0	0		nc|ENSG00000258436|Q7Z5J4-2|RAI1;ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1;nc|ENSG00000258436|Q7Z5J4-4|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7700500488281	2	509.253631	1016.49271	-0.17347	-8.8342E-05	-1.5491	-0.00078891	-1.7226	-0.00087725	509.2524573534521	49.278	0.69347	49.738	49.38	50.073	0.45983					32	16	3	0	0	0	0.4196	1	4842	4842		23.042	6.5693	1	265120			8057	2417	5644	5650	9259	9259					-0.014877069705221402
ETLKGPQP	8	Unmodified	_ETLKGPQP_					0	0	0			REV__ENST00000556716.5_1_14:21485757-21486740:-|nuORF	REV__ENST00000556716.5_1_14:21485757-21486740:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.8835754394531	2	435.239993	868.465432	1.8239	0.00079381	-1.435	-0.00062457	0.38884	0.00016924	435.2392279262753	28.579	0.77385	28.56	28.167	28.941	-0.019405					47	19	3	0	0	0	0.4196	1	1349	1349		6.3127	2.6283	1	119490	+		8058	28708	5645	5651	9260	9260					0.025938094890989305
ETLKKSIG	8	Unmodified	_ETLKKSIG_					0	0	0			REV__ENSG00000115423|ENST00000389394|DNAH6	REV__ENSG00000115423|ENST00000389394|DNAH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2633056640625	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.87479	1	1854	1854		30.504	1.3541	1	11160000	+		8059	18120	5646	5652	9261	9261					0.07010669040244011
ETLLRLRNGH	10	Unmodified	_ETLLRLRNGH_					0	0	0			REV__ENSG00000186907|ENST00000335099|RTN4RL2	REV__ENSG00000186907|ENST00000335099|RTN4RL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747985839844	3	403.566794	1207.67855	-0.14585	-5.8862E-05	-3.4204	-0.0013804	-3.5663	-0.0014392	403.56542188966887	81.101	0.24355	81.601	81.459	81.702	0.49967					7	5	2	0	0	0	0.37624	1	9358	9358		36.318	0	1	82230	+		8060	22889	5647	5653	9262	9262					0.08302115268793386
ETLMVIVKV	9	Unmodified	_ETLMVIVKV_					0	0	0			REV__nc|ENSG00000081237|P08575-4|PTPRC	REV__nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3129272460938	2	516.312103	1030.60965	0.62952	0.00032503	2.569	0.0013264	3.1985	0.0016514	516.313424955158	31.968	1.9583	32.075	31.334	33.292	0.10707					88	45	3	0	0	0	0.78983	1	2203	2203		27.882	2.4321	1	546410	+		8061	16821	5648	5654	9263	9263					0.09557314924882121
ETLMVIVKV	9	Unmodified	_ETLMVIVKV_					0	0	0			REV__nc|ENSG00000081237|P08575-4|PTPRC	REV__nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3118896484375	2	516.312103	1030.60965	0.96654	0.00049903	2.5474	0.0013153	3.514	0.0018143	516.3133887311924	32.644	2.0073	32.856	32.593	34.6	0.21168					79	47	2	0	0	0	0.76255	1	2387	2387		35.618	2.1027	1	535970	+		8062	16821	5648	5654	9264	9264					0.09557314924882121
ETLMVIVKV	9	Unmodified	_ETLMVIVKV_					0	0	0			REV__nc|ENSG00000081237|P08575-4|PTPRC	REV__nc|ENSG00000081237|P08575-4|PTPRC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3118896484375	2	516.312103	1030.60965	0.62952	0.00032503	2.569	0.0013264	3.1985	0.0016514	516.313424955158	31.968	1.9583	32.075	31.334	33.292	0.10707					88	45	3	0	0	0	0.20789	1	2387	2387		35.618	2.8059	1	546410	+		8063	16821	5648	5654	9265	9265					0.09557314924882121
ETLPLPLGVI	10	Unmodified	_ETLPLPLGVI_					0	0	0		ENST00000533635.5_1_11:6587803-6591461:+|nuORF;ENST00000525883.5_1_11:6587352-6591461:+|nuORF	ENST00000533635.5_1_11:6587803-6591461:+|nuORF	ENST00000533635.5_1_11:6587803-6591461:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3228759765625	2	526.323525	1050.6325	-0.18304	-9.6338E-05	2.014	0.00106	1.8309	0.00096366	526.324520166758	61.08	1.3849	61.181	59.837	61.222	0.10082					92	55	2	0	0	0	0.86452	1	5236	5236		30.504	3.8107	1	275350			8064	13244	5649	5655	9266	9266					0.10920657314022719
ETLPLPLGVI	10	Unmodified	_ETLPLPLGVI_					0	0	0		ENST00000533635.5_1_11:6587803-6591461:+|nuORF;ENST00000525883.5_1_11:6587352-6591461:+|nuORF	ENST00000533635.5_1_11:6587803-6591461:+|nuORF	ENST00000533635.5_1_11:6587803-6591461:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.324951171875	2	526.323525	1050.6325	-0.53497	-0.00028157	2.7776	0.0014619	2.2427	0.0011804	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.86452	1	5218	5218		30.504	10.022	1	220370			8065	13244	5649	5655	9267	9267					0.10920657314022719
ETLTLPDPE	9	Unmodified	_ETLTLPDPE_					0	0	0		ENSG00000154217|ENST00000581322|PITPNC1	ENSG00000154217|ENST00000581322|PITPNC1	ENSG00000154217|ENST00000581322|PITPNC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.753173828125	2	507.75313	1013.49171	-0.78055	-0.00039633	0.61029	0.00030988	-0.17026	-8.645E-05	507.75333135770444	62.615	1.2565	63.002	62.534	63.791	0.3878					81	28	4	0	0	0	0.64922	1	6710	6710		44.117	5.3107	1	1463300			8066	5261	5650	5656	9268	9268					-0.01449966130098801
ETLTLPDPE	9	Unmodified	_ETLTLPDPE_					0	0	0		ENSG00000154217|ENST00000581322|PITPNC1	ENSG00000154217|ENST00000581322|PITPNC1	ENSG00000154217|ENST00000581322|PITPNC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.752685546875	2	507.75313	1013.49171	0.84789	0.00043052	-0.76332	-0.00038758	0.084565	4.2938E-05	507.7524998605722	62.525	1.3198	63.08	62.559	63.879	0.55449					81	30	4	0	0	0	0.35373	2	6704	6704;6716		60.972	9.5523	1	1695100			8067	5261	5650	5656	9269;9270	9269					-0.01449966130098801
ETLVSQILD	9	Unmodified	_ETLVSQILD_					0	0	0			REV__nc|ENSG00000182621|Q9NQ66-2|PLCB1	REV__nc|ENSG00000182621|Q9NQ66-2|PLCB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7711181640625	2	509.276772	1016.53899	0.74924	0.00038157	-1.0943	-0.0005573	-0.34505	-0.00017573	509.7797895546147	33.889	0.49834	34.071	33.833	34.331	0.1821					25	11	3	0	0	0	0.20789	1	2483	2483		74.255	2.3776	1	182310	+		8068	22537	5651	5657	9271	9271					0.031383131409029374
ETLYLVPLGL	10	Unmodified	_ETLYLVPLGL_					0	0	0		ENST00000313421.11_1_11:60786815-60787121:+|nuORF	ENST00000313421.11_1_11:60786815-60787121:+|nuORF	ENST00000313421.11_1_11:60786815-60787121:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.4761962890625	2	559.328808	1116.64306	-0.99331	-0.00055558	-2.7349	-0.0015297	-3.7282	-0.0020853	559.3273085383488	44.574	0.68469	45.419	45.106	45.791	0.84437					43	16	4	0	0	0	0.37624	1	4076	4076		15.642	0	1	641170			8069	9952	5652	5658	9272	9272					0.08940639968409414
ETNTVLLGGL	10	Unmodified	_ETNTVLLGGL_					0	0	0		ENSG00000131459|ENST00000253778|GFPT2	ENSG00000131459|ENST00000253778|GFPT2	ENSG00000131459|ENST00000253778|GFPT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7839050292969	2	508.784764	1015.55498	-1.0195	-0.00051871	-0.29829	-0.00015177	-1.3178	-0.00067048	508.78449272511665	42.17	0.76888	42.868	42.571	43.339	0.69754					39	18	3	0	0	0	0.18001	1	3772	3772		90.777	0.40684	1	1429200			8070	3733	5653	5659	9273	9273					0.04782019377819324
ETNVLLDYL	9	Unmodified	_ETNVLLDYL_					0	0	0			REV__ENSG00000151779|ENST00000281513|NBAS;REV__nc|ENSG00000151779|A2RRP1-2|NBAS	REV__nc|ENSG00000151779|A2RRP1-2|NBAS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.26171875	2	540.284597	1078.55464	-0.32355	-0.00017481	0.11804	6.3776E-05	-0.20551	-0.00011103	540.284501508399	86.453	0.64908	86.896	86.531	87.18	0.44331					28	15	3	0	0	0	0.20789	1	10145	10145		47.657	0	1	221310	+		8071	20268;29931	5654	5660	9274	9274					0.018505996579506245
ETPALELPL	9	Unmodified	_ETPALELPL_					0	0	0		nc|ENSG00000188986|Q8WX92|NELFB;ENSG00000188986|ENST00000343053|NELFB	nc|ENSG00000188986|Q8WX92|NELFB	nc|ENSG00000188986|Q8WX92|NELFB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.2936096191406	2	491.776408	981.538263	0.058254	2.8648E-05	0.47282	0.00023252	0.53107	0.00026117	491.77657923078436	62.201	0.44112	62.168	61.892	62.333	-0.033173					20	15	2	0	0	0	0.20789	1	5895	5895		31.955	15.482	1	93635			8072	7977	5655	5661	9275	9275					0.04675518491865205
ETPDGENA	8	Unmodified	_ETPDGENA_					0	0	0			REV__nc|ENSG00000120889|O14763-2|TNFRSF10B	REV__nc|ENSG00000120889|O14763-2|TNFRSF10B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.66986083984375	2	416.669597	831.324641	1.9395	0.00080815	-1.4382	-0.00059925	0.50134	0.00020889	416.6691699371926	94.865	1.1525	95.297	94.89	96.042	0.4324					58	27	4	0	0	0	0.88601	1	11316	11316		34.173	9.6534	1	906750	+		8073	18435	5656	5662	9276	9276					-0.09776813954988484
ETPKFKLD	8	Unmodified	_ETPKFKLD_					0	0	0		nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;ENSG00000183091|ENST00000397345|NEB	nc|ENSG00000183091|P20929-4|NEB	nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.767578125	2	489.26875	976.522947	-3.0941	-0.0015138	0.53349	0.00026102	-2.5606	-0.0012528	489.26883558760886	40.692	0.67071	40.698	40.36	41.031	0.0065727					27	17	2	0	0	0	0.9283	1	2936	2936		49.442	12.282	1	273170			8074	7501	5657	5663	9277	9277					0.03374651694673503
ETPKPLLV	8	Unmodified	_ETPKPLLV_					0	0	0		ENSG00000164946|ENST00000380880|FREM1	ENSG00000164946|ENST00000380880|FREM1	ENSG00000164946|ENST00000380880|FREM1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.778076171875	2	448.776211	895.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.887	1	67.887	67.387	68.387	0								0	0	0	0.29498	1	6013	6013		26.796	1.3459	1				8075	6029	5658	5664	9278	9278					0.08592143562680121
ETPPAHPAR	9	Unmodified	_ETPPAHPAR_					0	0	0		nc|ENSG00000096063|Q96SB4-3|SRPK1	nc|ENSG00000096063|Q96SB4-3|SRPK1	nc|ENSG00000096063|Q96SB4-3|SRPK1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.2691650390625	2	488.253966	974.493378	-0.22557	-0.00011013	-1.0805	-0.00052754	-1.306	-0.00063768	488.2534155606342	29.228	0.38932	29.184	28.97	29.359	-0.043095					20	14	2	0	0	0	0.20789	1	1524	1524		21.96	0	1	22556			8076	14804	5659	5665	9279	9279					0.005111324691824848
ETPRPGKR	8	Unmodified	_ETPRPGKR_					0	0	0		nc|ENSG00000122507|Q3SYG4-3|BBS9	nc|ENSG00000122507|Q3SYG4-3|BBS9	nc|ENSG00000122507|Q3SYG4-3|BBS9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7693786621094	2	470.769783	939.525013	-1.0178	-0.00047915	-1.0022	-0.0004718	-2.02	-0.00095095	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.92394	2	4398	4283;4398		53.351	8.8512	1	1648400			8077	14880	5660	5666	9280;9281	9281					0.05283125223149909
ETQETALTL	9	Unmodified	_ETQETALTL_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000490185.1_1_5:139838323-139844373:+|nuORF;nc|ENSG00000131503|Q8IWZ3-5|ANKHD1;nc|ENSG00000131503|Q8IWZ3-3|ANKHD1;nc|ENSG00000131503|Q8IWZ3-2|ANKHD1;nc|ENSG00000132466|O75179-5|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-7|ANKRD17	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.24774169921875	2	503.258579	1004.50261	-1.3014	-0.00065495	-1.0812	-0.0005441	-2.3826	-0.001199	503.2578589319627	43.273	0.63689	44.047	43.826	44.463	0.7738					34	15	3	0	0	0	0.14236	1	3923	3923		85.161	0	1	1123100			8078	14916;14922	5661	5667	9282	9282					0.0005343624418401305
ETQQRADPQCP	11	Unmodified	_ETQQRADPQCP_					0	0	0		CON__Q2UVX4	CON__Q2UVX4	CON__Q2UVX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	636.7826538085938	2	636.785501	1271.55645	0.043928	2.7973E-05	-2.3874	-0.0015202	-2.3434	-0.0014923	636.7836559309865	53.854	0.65403	53.792	53.482	54.136	-0.062061					34	15	3	0	0	0	0.72106	1	4407	4407		28.081	0	1	454210		+	8079	616	5662	5668	9283	9283					-0.06846714595735648
ETQTVDHDEE	10	Unmodified	_ETQTVDHDEE_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	602.736083984375	2	601.744022	1201.47349	-0.061352	-3.6918E-05	-0.23656	-0.00014235	-0.29791	-0.00017927	602.245912295987	37.871	0.34278	38.393	38.21	38.553	0.52236					12	8	2	0	0	0	0.37624	1	3094	3094		39.253	0	1	87343	+		8080	16914	5663	5669	9284	9284					-0.11918752842734648
ETRHIASAY	9	Unmodified	_ETRHIASAY_					0	0	0			REV__ENST00000503413.1_1_4:81189541-81207823:+|nuORF	REV__ENST00000503413.1_1_4:81189541-81207823:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7427368164062	2	524.26453	1046.51451	-0.041114	-2.1555E-05	-1.4971	-0.00078486	-1.5382	-0.00080641	524.2617515769509	48.876	0.15608	49.336	49.262	49.419	0.45983					6	3	2	0	0	0	0.20789	1	4745	4745		27.882	0	1	99430	+		8081	19494	5664	5670	9285	9285					-0.006889022219411345
ETRNGGPQ	8	Unmodified	_ETRNGGPQ_					0	0	0			REV__ENSG00000109758|ENST00000382774|HGFAC	REV__ENSG00000109758|ENST00000382774|HGFAC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.5859375	2	429.706848	857.399144	1.3636	0.00058596	3.658	0.0015719	5.0217	0.0021578	429.7085842502051	34.039	0.41204	34.344	34.076	34.488	0.30494					14	9	2	0	0	0	0.4196	1	2487	2487		21.96	0	1	104960	+		8082	17772	5665	5671	9286	9286					-0.03526006352933564
ETRQEEPA	8	Unmodified	_ETRQEEPA_					0	0	0			REV__ENST00000508165.1_1_4:135249290-135249890:+|nuORF	REV__ENST00000508165.1_1_4:135249290-135249890:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.22442626953125	2	480.225071	958.435589	0.27485	0.00013199	-0.39974	-0.00019197	-0.12489	-5.9975E-05	480.2247780793244	32.121	0.55891	32.247	31.988	32.546	0.12642					27	12	3	0	0	0	0.79403	1	2213	2213		63.306	6.5852	1	385430	+		8083	27918	5666	5672	9287	9287					-0.04529174246908951
ETRQEEPA	8	Unmodified	_ETRQEEPA_					0	0	0			REV__ENST00000508165.1_1_4:135249290-135249890:+|nuORF	REV__ENST00000508165.1_1_4:135249290-135249890:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.224853515625	2	480.225071	958.435589	-0.098141	-4.713E-05	-0.13474	-6.4706E-05	-0.23288	-0.00011184	480.22491848952086	32.082	0.60151	32.189	31.93	32.532	0.10707					27	13	3	0	0	0	0.47906	1	2225	2225		76.847	1.8033	1	392860	+		8084	27918	5666	5672	9288	9288					-0.04529174246908951
ETRRLLHP	8	Unmodified	_ETRRLLHP_					0	0	0			REV__ENST00000371753.5_1_9:138900198-138900429:-|nuORF	REV__ENST00000371753.5_1_9:138900198-138900429:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.2970886230469	2	511.298707	1020.58286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.707	1	16.096	15.596	16.596	-0.6107								0	0	0	0.29694	1	167	167		37.028	4.2161	1		+		8085	25697	5667	5673	9289	9289					0.07339387148567766
ETRTLKAR	8	Unmodified	_ETRTLKAR_					0	0	0		ENST00000397601.5_1_13:97928199-97928283:+|nuORF	ENST00000397601.5_1_13:97928199-97928283:+|nuORF	ENST00000397601.5_1_13:97928199-97928283:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.78973388671875	2	487.790715	973.566878	-1.0855	-0.00052952	0.66797	0.00032583	-0.41757	-0.00020369	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.87064	1	7566	7566		29.15	1.2673	1	309700			8086	11155	5668	5674	9290	9290					0.07903680911658739
ETRWPESL	8	Unmodified	_ETRWPESL_					0	0	0		ENST00000396578.7_1_2:228029329-228029443:+|nuORF	ENST00000396578.7_1_2:228029329-228029443:+|nuORF	ENST00000396578.7_1_2:228029329-228029443:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.255615234375	2	509.253631	1016.49271	-0.84137	-0.00042847	-1.812	-0.00092274	-2.6533	-0.0013512	509.252557341345	43.362	0.84482	43.795	43.46	44.305	0.4334					45	20	4	0	0	0	0.36305	1	3926	3926		84.916	5.2029	1	3334400			8087	11120	5669	5675	9291	9291					-0.014877069705221402
ETRYPQQYQP	10	Unmodified	_ETRYPQQYQP_					0	0	0		ENSG00000259956|ENST00000563281|RBM15B;nc|ENSG00000259956|Q8NDT2-2|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2626647949219	3	437.210565	1308.60986	1.0734	0.0004693	4.4704	0.0019545	5.5438	0.0024238	437.2126049178082	28.744	0.72906	28.57	28.204	28.933	-0.17336					21	16	2	0	0	0	0.37624	1	1775	1775		9.6461	6.0271	1	101970			8088	8915	5670	5676	9292	9292					-0.03209593821566159
ETSKEIAESL	10	Unmodified	_ETSKEIAESL_					0	0	0			REV__nc|ENSG00000111647|A0JNW5-2|BLTP3B	REV__nc|ENSG00000111647|A0JNW5-2|BLTP3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.7854614257812	2	553.782418	1105.55028	0.3583	0.00019842	0.86119	0.00047691	1.2195	0.00067533	553.7826285467613	45.646	0.46501	45.688	45.523	45.988	0.042599					18	12	2	0	0	0	0.66675	1	3313	3313		46.457	0.48454	1	168330	+		8089	17880	5671	5677	9293	9293					0.00173090444400259
ETSLPLLLP	9	Unmodified	_ETSLPLLLP_					0	0	0			REV__ENSG00000115760|ENST00000421745|BIRC6	REV__ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7951965332031	2	491.794601	981.574648	0.09879	4.8585E-05	2.3098	0.001136	2.4086	0.0011846	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.78058	1	4194	4194		30.504	5.0535	1	1349600	+		8090	18149	5672	5678	9294	9294					0.08312395388577443
ETSLPLLLP	9	Unmodified	_ETSLPLLLP_					0	0	0			REV__ENSG00000115760|ENST00000421745|BIRC6	REV__ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7961120605469	2	491.794601	981.574648	-0.47857	-0.00023536	2.9858	0.0014684	2.5072	0.001233	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.7932	1	4704	4704		18.324	1.8513	1	1898900	+		8091	18149	5672	5678	9295	9295					0.08312395388577443
ETSMLLLELE	10	Oxidation (M)	_ETSM(Oxidation (M))LLLELE_		ETSM(1)LLLELE		ETSM(42)LLLELE	0	0	1			REV__nc|ENSG00000118513|P10242-11|MYB	REV__nc|ENSG00000118513|P10242-11|MYB	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3025512695312	2	597.302129	1192.58971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.509	1	16.022	15.522	16.522	-0.48718								0	0	0	0.45132	1	140	140		42.396	7.2441	1		+		8092	29804	5673	5679	9296	9296		434			0.001114744035703552
ETSSGRKVR	9	Unmodified	_ETSSGRKVR_					0	0	0		ENST00000335312.7_1_19:3631933-3632425:-|nuORF	ENST00000335312.7_1_19:3631933-3632425:-|nuORF	ENST00000335312.7_1_19:3631933-3632425:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.7627868652344	2	510.283254	1018.55196	-0.52998	-0.00027044	-3.2441	-0.0016554	-3.7741	-0.0019259	510.28166296125187	39.038	0.43036	39.593	39.36	39.79	0.55449					16	9	2	0	0	0	0.20789	1	3280	3280		37.159	9.2769	1	94074			8093	10156	5674	5680	9297	9297					0.04342189043654798
ETSSGRKVR	9	Unmodified	_ETSSGRKVR_					0	0	0		ENST00000335312.7_1_19:3631933-3632425:-|nuORF	ENST00000335312.7_1_19:3631933-3632425:-|nuORF	ENST00000335312.7_1_19:3631933-3632425:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	510.283254	1018.55196	-0.78014	-0.00039809	-3.1009	-0.0015823	-3.881	-0.0019804	510.2815412047667	39.168	0.34512	39.536	39.342	39.687	0.36797	-0.028561	0.00010526	NaN	29.15	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72476			8094	10156	5674	5680							0.04342189043654798
ETSSSKVF	8	Unmodified	_ETSSSKVF_					0	0	0			REV__ENSG00000107611|ENST00000377833|CUBN	REV__ENSG00000107611|ENST00000377833|CUBN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.7223815917969	2	442.721633	883.428712	1.3757	0.00060905	0.9152	0.00040518	2.2909	0.0010142	442.72174062194034	27.904	1.1856	27.881	27.606	28.792	-0.023556					62	28	3	0	0	0	0.86791	1	1326	1326		28.254	4.0515	1	143380	+		8095	17666	5675	5681	9298	9298					-0.017664871274632787
ETSSSSSK	8	Unmodified	_ETSSSSSK_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.6883544921875	2	406.685247	811.355941	2.7533	0.0011197	3.7807	0.0015376	6.5341	0.0026573	406.6868857776059	28.706	1.001	28.686	28.167	29.168	-0.019407					47	28	2	0	0	0	0.88185	1	1394	1394		32.812	4.9302	1	76555			8096	3599	5676	5682	9299	9299					-0.05728240920893768
ETSSSSSK	8	Unmodified	_ETSSSSSK_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.685247	811.355941	-1.9236	-0.00078232	8.9052	0.0036216	6.9815	0.0028393	406.68876827256514	28.618	0.37025	28.687	28.437	28.807	0.06868	-0.02567	0.0018765	NaN	32.812	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49543			8097	3599	5676	5682							-0.05728240920893768
ETSSSSSK	8	Unmodified	_ETSSSSSK_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	406.685247	811.355941	0.23423	9.5256E-05	7.0978	0.0028866	7.332	0.0029818	406.68807131863605	29.014	0.52064	28.985	28.65	29.171	-0.029207	0.27221	0.00040644	NaN	32.812	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62785			8098	3599	5676	5682							-0.05728240920893768
ETSSSSSK	8	Unmodified	_ETSSSSSK_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	406.685247	811.355941	0.51484	0.00020938	6.6508	0.0027048	7.1657	0.0029142	406.6880298334906	29.128	0.51811	28.955	28.717	29.235	-0.17336	0.24275	4.29E-05	NaN	32.812	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65543			8099	3599	5676	5682							-0.05728240920893768
ETSSWILY	8	Unmodified	_ETSSWILY_					0	0	0		ENST00000315579.9_1_12:6626009-6626543:+|nuORF	ENST00000315579.9_1_12:6626009-6626543:+|nuORF	ENST00000315579.9_1_12:6626009-6626543:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7353515625	2	499.745108	997.475663	0.077107	3.8534E-05	2.8039	0.0014013	2.881	0.0014398	499.74645796238923	81.023	1.3966	81.523	80.753	82.149	0.49967					58	33	2	0	0	0	0.4196	1	9320	9320		35.201	16.876	1	150490			8100	9978	5677	5683	9300	9300					-0.02317627576326231
ETSTALPQSSL	11	Unmodified	_ETSTALPQSSL_					0	0	0		ENSG00000198780|ENST00000687041|FAM169A	ENSG00000198780|ENST00000687041|FAM169A	ENSG00000198780|ENST00000687041|FAM169A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.9900512695312	2	567.287868	1132.56118	-0.36402	-0.0002065	1.0881	0.00061727	0.7241	0.00041077	567.2884336656869	109.89	0.82098	109.89	109.64	110.46	0					54	33	2	0	0	0	0.67041	1	11389	11389		36.318	2.1451	1	469710			8101	8330	5678	5684	9301	9301					0.0002049281868039543
ETTGNLNN	8	Unmodified	_ETTGNLNN_					0	0	0			REV__nc|ENSG00000140367|Q8WVN8-4|UBE2Q2	REV__nc|ENSG00000140367|Q8WVN8-4|UBE2Q2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.59735107421875	2	431.698689	861.382825	1.8408	0.00079468	-0.010761	-4.6455E-06	1.8301	0.00079003	431.6985125599789	105.98	1.6299	106.1	104.83	106.46	0.12741					86	49	2	0	0	0	0.4196	1	12898	12898		17.365	0	1	215080	+		8102	29889	5679	5685	9302	9302					-0.053411323097179775
ETTLENGLI	9	Unmodified	_ETTLENGLI_					0	0	0		ENSG00000256525|ENST00000539111|POLG2	ENSG00000256525|ENST00000539111|POLG2	ENSG00000256525|ENST00000539111|POLG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2598876953125	2	495.261122	988.507691	1.1508	0.00056992	-3.3281	-0.0016483	-2.1773	-0.0010783	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.66686	1	2679	2679		42.864	10.909	1	3842700			8103	8898	5680	5686	9303	9303					0.0129774010682695
ETTLSSKSH	9	Unmodified	_ETTLSSKSH_					0	0	0		ENSG00000152580|ENST00000282466|IGSF10	ENSG00000152580|ENST00000282466|IGSF10	ENSG00000152580|ENST00000282466|IGSF10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.3133850097656	2	495.248546	988.482539	0.15247	7.551E-05	4.2542	0.0021069	4.4067	0.0021824	495.2502563393451	34.207	0.45346	34.417	34.234	34.687	0.21002					21	10	3	0	0	0	0.20789	1	2541	2541		36.447	0	1	318840			8104	5185	5681	5687	9304	9304					-0.012163146957618665
ETTNKQETL	9	Unmodified	_ETTNKQETL_					0	0	0			REV__nc|ENSG00000113520|P05112-2|IL4	REV__nc|ENSG00000113520|P05112-2|IL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.2666625976562	2	532.266936	1062.51932	0.88711	0.00047218	-1.075	-0.00057217	-0.18785	-9.9989E-05	532.26627731075	23.894	1.0893	23.513	23.063	24.153	-0.38178					48	24	3	0	0	0	0.33718	1	1133	1133		62.107	5.3864	1	868860	+		8105	29788	5682	5688	9305	9305					-0.009440628698484943
ETTQKATAVD	10	Unmodified	_ETTQKATAVD_					0	0	0		chr2:73734588-73736617|21|21.95|0.52|5.39|-|2|TE_info:L2,L2_dup6768,L2,LINE,donor,+,73736617,73736795|TPRKB,None|2	chr2:73734588-73736617|21|21.95|0.52|5.39|-|2|TE_info:L2,L2_dup6768,L2,LINE,donor,+,73736617,73736795|TPRKB,None|2	chr2:73734588-73736617|21|21.95|0.52|5.39|-|2|TE_info:L2,L2_dup6768,L2,LINE,donor,+,73736617,73736795|TPRKB,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.2654418945312	2	532.266936	1062.51932	0.88711	0.00047218	-1.075	-0.00057217	-0.18785	-9.9989E-05	532.26627731075	23.894	1.0893	23.513	23.063	24.153	-0.38178					48	24	3	0	0	0	0.54701	1	1145	1145		52.937	5.2794	1	868860			8106	351	5683	5689	9306	9306					-0.009440628698484943
ETTVGRFYTNL	11	Unmodified	_ETTVGRFYTNL_					0	0	0		ENSG00000158966|ENST00000651257|CACHD1;nc|ENSG00000158966|Q5VU97-2|CACHD1	ENSG00000158966|ENST00000651257|CACHD1	ENSG00000158966|ENST00000651257|CACHD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77935791015625	3	434.222582	1299.64592	0.46553	0.00020214	-3.3845	-0.0014696	-2.9189	-0.0012675	434.55427979501894	35.808	0.59677	35.818	35.522	36.119	0.0092773					15	12	2	0	0	0	0.17442	1	2257	2257		13.508	0	1	52547			8107	5505	5684	5690	9307	9307					0.008078633552941028
ETVKPGPEE	9	Unmodified	_ETVKPGPEE_					0	0	0		ENSG00000166963|ENST00000300231|MAP1A;nc|ENSG00000166963|P78559-2|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.24615478515625	2	493.245472	984.476391	0.44489	0.00021944	0.95609	0.00047159	1.401	0.00069103	493.24582366684365	27.777	1.5267	27.813	27.395	28.922	0.03607					129	51	4	0	0	0	0.19437	2	1303	1303;1317		75.043	5.3863	1	868330			8108	6254	5685	5691	9308;9309	9308					-0.01646832927281139
ETVKPGPEE	9	Unmodified	_ETVKPGPEE_					0	0	0		ENSG00000166963|ENST00000300231|MAP1A;nc|ENSG00000166963|P78559-2|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.24603271484375	2	493.245472	984.476391	-0.22235	-0.00010967	1.4183	0.00069959	1.196	0.00058992	493.2460736786689	27.772	1.7235	27.734	27.305	29.029	-0.038523					102	45	4	0	0	0	0.48102	1	1387	1387		52.937	3.4952	1	1093300			8109	6254	5685	5691	9310	9310					-0.01646832927281139
ETVLTIGPI	9	Unmodified	_ETVLTIGPI_					0	0	0			REV__ENST00000334003.11_1_7:76959552-77026708:-|nuORF	REV__ENST00000334003.11_1_7:76959552-77026708:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.77886962890625	2	471.778951	941.543348	-0.65012	-0.00030671	0.67197	0.00031702	0.021851	1.0309E-05	471.77898452212014	81.892	1.4081	82.392	81.953	83.361	0.49967					75	34	4	0	0	0	0.19953	1	9524	9524		73.975	13.681	1	2439200	+		8110	22820	5686	5692	9311	9311					0.070238223544834
ETVRVRCY	8	Unmodified	_ETVRVRCY_					0	0	0		CON__Q28085	CON__Q28085	CON__Q28085	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.2657470703125	2	513.263476	1024.5124	1.3367	0.00068608	4.1458	0.0021279	5.4825	0.002814	513.2655717928134	50.712	0.73707	51.463	51.04	51.777	0.75174					28	17	3	0	0	0	0.90465	1	5031	5031		40.573	6.4001	1	487640		+	8111	607	5687	5693	9312	9312					0.0011234576857077627
ETVTELSTL	9	Unmodified	_ETVTELSTL_					0	0	0			REV__ENST00000579081.5_2_17:29626598-29701170:+|nuORF	REV__ENST00000579081.5_2_17:29626598-29701170:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.7605895996094	2	496.760955	991.507357	-1.058	-0.00052556	0.79855	0.00039669	-0.25943	-0.00012888	496.76126072971397	44.137	0.61014	44.587	44.322	44.932	0.45025					30	14	3	0	0	0	0.64922	1	4036	4036		44.117	3.3386	1	874010	+		8112	23165	5688	5694	9313	9313					0.011263203869589233
ETVTTRRK	8	Unmodified	_ETVTTRRK_					0	0	0			REV__nc|ENSG00000116580|Q3T8J9-3|GON4L	REV__nc|ENSG00000116580|Q3T8J9-3|GON4L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.7605895996094	2	495.788173	989.561792	-1.0375	-0.00051439	3.2262	0.0015995	2.1886	0.0010851	495.7895456077201	43.978	0.57206	44.428	44.16	44.732	0.45025					28	13	3	0	0	0	0.4196	1	4036	4036		37.159	1.5408	1	914270	+		8113	18204	5689	5695	9314	9314					0.0665937704903854
ETVVIFYD	8	Unmodified	_ETVVIFYD_					0	0	0		nc|ENSG00000196182|Q8N2I9-3|STK40;ENSG00000196182|ENST00000373132|STK40;nc|ENSG00000196182|Q8N2I9-4|STK40	nc|ENSG00000196182|Q8N2I9-3|STK40	nc|ENSG00000196182|Q8N2I9-3|STK40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.2462463378906	2	493.247483	984.480414	0.44489	0.00021944	-3.1217	-0.0015398	-2.6768	-0.0013203	493.24582366684365	27.777	1.5267	27.813	27.395	28.922	0.03607					129	51	4	0	0	0	0.88944	1	1311	1311		57.811	2.3071	1	868330			8114	8023	5690	5696	9315	9315					-0.012447434335740581
ETVVIFYD	8	Unmodified	_ETVVIFYD_					0	0	0		nc|ENSG00000196182|Q8N2I9-3|STK40;ENSG00000196182|ENST00000373132|STK40;nc|ENSG00000196182|Q8N2I9-4|STK40	nc|ENSG00000196182|Q8N2I9-3|STK40	nc|ENSG00000196182|Q8N2I9-3|STK40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.24627685546875	2	493.247483	984.480414	-0.22235	-0.00010967	-2.6595	-0.0013118	-2.8818	-0.0014215	493.2460736786689	27.772	1.7235	27.734	27.305	29.029	-0.038523					102	45	4	0	0	0	0.84634	1	1411	1411		60.294	5.5176	1	1093300			8115	8023	5690	5696	9316	9316					-0.012447434335740581
ETWYIHLFP	9	Unmodified	_ETWYIHLFP_					0	0	0			REV__ENSG00000160218|ENST00000291574|TRAPPC10	REV__ENSG00000160218|ENST00000291574|TRAPPC10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	603.2991943359375	2	603.303124	1204.5917	-1.0312	-0.00062215	-4.171	-0.0025163	-5.2022	-0.0031385	603.3005093089952	31.841	1.0497	31.835	31.271	32.32	-0.0061455					36	24	3	0	0	0	0.76996	1	1778	1778		33.516	4.366	1	46679	+		8116	20704	5691	5697	9317	9317					-0.0024168400561848102
ETYARYRY	8	Unmodified	_ETYARYRY_					0	0	0		ENST00000553142.5_1_12:58020529-58021701:-|nuORF;nc|ENSG00000135454|Q00973-2|B4GALNT1;ENSG00000135454|ENST00000341156|B4GALNT1	ENST00000553142.5_1_12:58020529-58021701:-|nuORF	ENST00000553142.5_1_12:58020529-58021701:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.593505859375	2	561.272355	1120.53016	0.12859	7.2173E-05	-0.98091	-0.00055056	-0.85232	-0.00047838	561.2717060119835	76.584	0.60169	77.152	76.852	77.453	0.56836					29	20	2	0	0	0	0.4196	1	8758	8758		8.2313	0	1	343690			8117	4024	5692	5698	9318	9318					-0.02528615704909498
EVAAGYLVPL	10	Unmodified	_EVAAGYLVPL_					0	0	0		ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.31396484375	2	516.292225	1030.5699	0.80167	0.0004139	1.0991	0.00056744	1.9007	0.00098134	516.2927911794718	98.93	0.34563	99.087	98.769	99.115	0.15659					16	7	3	0	0	0	0.37624	1	10279	10279		29.15	0	1	112620			8118	1054	5693	5699	9319	9319					0.05583511245799855
EVAATVHRKLK	11	Unmodified	_EVAATVHRKLK_					0	0	0		ENSG00000146918|ENST00000356309|NCAPG2;nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000432615.5_1_7:158424360-158447416:-|nuORF;ENST00000467785.5_1_7:158424360-158447992:-|nuORF	ENSG00000146918|ENST00000356309|NCAPG2	ENSG00000146918|ENST00000356309|NCAPG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3792724609375	2	626.380229	1250.7459	0.92606	0.00058007	-2.534	-0.0015873	-1.608	-0.0010072	626.3785630608256	107.87	0.55867	107.95	107.45	108.01	0.084412					54	13	5	0	0	0	0.74405	1	11588	11588		9.1829	0	1	22268000			8119	4870	5694	5700	9320	9320					0.1305614547973164
EVAEHQVV	8	Unmodified	_EVAEHQVV_					0	0	0			REV__ENSG00000176142|ENST00000319172|TMEM39A	REV__ENSG00000176142|ENST00000319172|TMEM39A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.7349853515625	2	455.735074	909.455596	0.11172	5.0914E-05	0.074852	3.4113E-05	0.18657	8.5027E-05	455.73489417508915	31.816	0.64461	31.828	31.495	32.14	0.011446					29	15	3	0	0	0	0.86677	1	1754	1754		27.882	1.1893	1	114800	+		8120	22110	5695	5701	9321	9321					-0.0027537851627812415
EVAGRWRA	8	Unmodified	_EVAGRWRA_					0	0	0		DNLZ|p.R39W|69|0.5|ENSG0000|chr9:1-999|A/G|missense_variant	DNLZ|p.R39W|69|0.5|ENSG0000|chr9:1-999|A/G|missense_variant	DNLZ|p.R39W|69|0.5|ENSG0000|chr9:1-999|A/G|missense_variant	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7549743652344	2	472.756675	943.498798	-0.28077	-0.00013274	-0.99907	-0.00047232	-1.2798	-0.00060505	472.7560511356496	25.548	0.77612	25.507	25.111	25.888	-0.04117					46	21	3	0	0	0	0.92457	1	1107	1107		47.916	3.3845	1	114310			8121	643	5696	5702	9322	9322					0.024788560516412872
EVAGRWRA	8	Unmodified	_EVAGRWRA_					0	0	0		DNLZ|p.R39W|69|0.5|ENSG0000|chr9:1-999|A/G|missense_variant	DNLZ|p.R39W|69|0.5|ENSG0000|chr9:1-999|A/G|missense_variant	DNLZ|p.R39W|69|0.5|ENSG0000|chr9:1-999|A/G|missense_variant	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7552490234375	2	472.756675	943.498798	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.077	1	25.82	25.32	26.32	-0.2572								0	0	0	0.30712	1	1399	1399		49.442	6.5773	1				8122	643	5696	5702	9323	9323					0.024788560516412872
EVAKGRGPN	9	Unmodified	_EVAKGRGPN_					0	0	0		nc|ENSG00000163873|Q13003-2|GRIK3;ENSG00000163873|ENST00000373091|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2536926269531	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.77244	1	8636	8636		32.812	1.2826	1	1673200			8123	5876	5697	5703	9324	9324					0.027191324691784757
EVAKGRGPN	9	Unmodified	_EVAKGRGPN_					0	0	0		nc|ENSG00000163873|Q13003-2|GRIK3;ENSG00000163873|ENST00000373091|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2536926269531	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.76764	1	8053	8053		34.173	1.3601	1	1603800			8124	5876	5697	5703	9325	9325					0.027191324691784757
EVAKGRGPN	9	Unmodified	_EVAKGRGPN_					0	0	0		nc|ENSG00000163873|Q13003-2|GRIK3;ENSG00000163873|ENST00000373091|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2539978027344	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.77696	1	8208	8208		31.53	1.0262	1	1324500			8125	5876	5697	5703	9326	9326					0.027191324691784757
EVALGGLQSW	10	Unmodified	_EVALGGLQSW_					0	0	0		nc|ENSG00000104228|Q9UPQ4-2|TRIM35;ENSG00000104228|ENST00000305364|TRIM35	nc|ENSG00000104228|Q9UPQ4-2|TRIM35	nc|ENSG00000104228|Q9UPQ4-2|TRIM35	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.27783203125	2	530.277106	1058.53966	-0.86305	-0.00045766	0.10218	5.4184E-05	-0.76087	-0.00040347	530.2772642983474	82.233	0.6346	82.233	81.928	82.563	0					26	15	3	0	0	0	0.57924	1	7665	7665		51.193	13.381	1	64277			8126	2120	5698	5704	9327	9327					0.012731525806202626
EVALHLATQ	9	Unmodified	_EVALHLATQ_					0	0	0			REV__ENSG00000101752|ENST00000261537|MIB1	REV__ENSG00000101752|ENST00000261537|MIB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.8058776855469	2	491.271824	980.529095	0.8852	0.00043487	-1.7974	-0.000883	-0.91218	-0.00044813	491.2707383475061	28.086	0.66973	27.831	27.543	28.212	-0.25465					20	15	2	0	0	0	0.20789	1	1701	1701		45.972	0	1	68581	+		8127	17301	5699	5705	9328	9328					0.03805169926192775
EVAQVYNELL	10	Unmodified	_EVAQVYNELL_					0	0	0			REV__ENST00000527932.1_1_1:46080644-46081380:+|nuORF	REV__ENST00000527932.1_1_1:46080644-46081380:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3099975585938	2	589.308603	1176.60265	-0.33077	-0.00019493	-1.2705	-0.00074872	-1.6013	-0.00094365	589.3075589368876	44.062	0.53366	44.035	43.726	44.259	-0.026764					21	12	2	0	0	0	0.86348	1	3400	3400		31.53	0.96095	1	137100	+		8128	28239	5700	5706	9329	9329					0.0214167357801216
EVAVLLKHPFI	11	Unmodified	_EVAVLLKHPFI_					0	0	0		ENSG00000152582|ENST00000356031|SPEF2;nc|ENSG00000152582|Q9C093-2|SPEF2;nc|ENSG00000152582|Q9C093-4|SPEF2	ENSG00000152582|ENST00000356031|SPEF2;nc|ENSG00000152582|Q9C093-4|SPEF2	nc|ENSG00000152582|Q9C093-4|SPEF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.8843383789062	2	633.384448	1264.75434	-0.16034	-0.00010155	1.5232	0.00096475	1.3628	0.00086319	633.3853861154565	57.138	1.3537	57.109	56.711	58.065	-0.02866					59	39	2	0	0	0	0.71207	1	5255	5255		19.997	6.5427	1	143780			8129	14996;5186	5701	5707	9330	9330					0.13255699396381715
EVDEYRRHWWR	11	Unmodified	_EVDEYRRHWWR_					0	0	0		ENSG00000010072|ENST00000295050|SPRTN;nc|ENSG00000010072|Q9H040-3|SPRTN;nc|ENSG00000010072|Q9H040-2|SPRTN	ENSG00000010072|ENST00000295050|SPRTN	ENSG00000010072|ENST00000295050|SPRTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.9317626953125	3	544.599046	1630.77531	0.98935	0.0005388	-3.7064	-0.0020185	-2.7171	-0.0014797	544.5968958201821	19.125	0.85039	19.05	18.752	19.602	-0.074974					76	31	5	0	0	0	0.85439	1	412	412		5.6988	2.0797	1	439030			8130	761	5702	5708	9331	9331					-0.014849422420638803
EVDEYRRHWWR	11	Unmodified	_EVDEYRRHWWR_					0	0	0		ENSG00000010072|ENST00000295050|SPRTN;nc|ENSG00000010072|Q9H040-3|SPRTN;nc|ENSG00000010072|Q9H040-2|SPRTN	ENSG00000010072|ENST00000295050|SPRTN	ENSG00000010072|ENST00000295050|SPRTN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	409.2949523925781	4	408.701103	1630.77531	0.012698	5.1896E-06	-2.7263	-0.0011142	-2.7136	-0.0011091	408.9507239181929	18.742	0.47651	18.808	18.503	18.98	0.066296					42	23	3	0	0	0	0.18131	1	362	362		8.7993	7.5674	1	187680			8131	761	5702	5708	9332	9332					-0.014849422420638803
EVDEYRRHWWR	11	Unmodified	_EVDEYRRHWWR_					0	0	0		ENSG00000010072|ENST00000295050|SPRTN;nc|ENSG00000010072|Q9H040-3|SPRTN;nc|ENSG00000010072|Q9H040-2|SPRTN	ENSG00000010072|ENST00000295050|SPRTN	ENSG00000010072|ENST00000295050|SPRTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.2921142578125	4	408.701103	1630.77531	1.6264	0.0006647	-3.328	-0.0013602	-1.7016	-0.00069546	408.69977164240305	19.843	0.97667	19.373	18.79	19.767	-0.46967					38	20	3	0	0	0	0.18216	1	600	600		14.086	4.8742	1	361770			8132	761	5702	5708	9333	9333					-0.014849422420638803
EVDSAVGVYYD	11	Unmodified	_EVDSAVGVYYD_					0	0	0			REV__ENST00000466850.1_1_3:48964979-48965285:+|nuORF	REV__ENST00000466850.1_1_3:48964979-48965285:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.18328857421875	3	406.183793	1215.52955	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.199	1	26.199	25.699	26.699	0								0	0	0	0.56276	1	993	993		28.577	2.5133	1		+		8133	22208	5703	5709	9334	9334					-0.06959499935260283
EVDVFVSMGY	10	Unmodified	_EVDVFVSMGY_					0	0	0		chr5:83652821-83673424|19|12.84|0.16|6.35|-|ENST00000503117|HAPLN1,HAPLN1;ENSG00000145681|ENST00000274341|HAPLN1	chr5:83652821-83673424|19|12.84|0.16|6.35|-|ENST00000503117|HAPLN1,HAPLN1	chr5:83652821-83673424|19|12.84|0.16|6.35|-|ENST00000503117|HAPLN1,HAPLN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.2611694335938	2	573.262807	1144.51106	-0.95326	-0.00054647	-2.7522	-0.0015778	-3.7055	-0.0021242	573.2611734366095	36.948	0.53497	36.924	36.636	37.171	-0.023609					27	11	3	0	0	0	0.85934	1	2406	2406		35.618	1.4457	1	145590			8134	460	5704	5710	9335	9335					-0.05541333110818414
EVEESSKLFA	10	Unmodified	_EVEESSKLFA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.7835083007812	2	569.784961	1137.55537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.682	1	23.639	23.139	24.139	-0.043221								0	0	0	0.45132	1	801	801		19.997	2.6318	1		+		8135	20923	5705	5711	9336	9336					-0.00790605692986901
EVELKKLKH	9	Unmodified	_EVELKKLKH_					0	0	0		ENST00000379707.7_1_9:33255219-33262163:-|nuORF;nc|ENSG00000107262|Q99933-4|BAG1;nc|ENSG00000107262|Q99933-3|BAG1;ENSG00000107262|ENST00000634734|BAG1;nc|ENSG00000107262|Q99933-2|BAG1	ENST00000379707.7_1_9:33255219-33262163:-|nuORF	ENST00000379707.7_1_9:33255219-33262163:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	562.3434448242188	2	562.345323	1122.67609	0.77292	0.00043465	-3.8043	-0.0021393	-3.0314	-0.0017047	562.3430494101636	90.476	3.0468	90.629	89.657	92.704	0.15388					171	72	3	0	0	0	0.7932	1	9053	9053		20.947	1.8434	1	591570			8136	2338	5706	5712	9337	9337					0.11966266811100468
EVFDIETRSW	10	Unmodified	_EVFDIETRSW_					0	0	0		ENSG00000162873|ENST00000367155|KLHDC8A	ENSG00000162873|ENST00000367155|KLHDC8A	ENSG00000162873|ENST00000367155|KLHDC8A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.3131103515625	2	641.309135	1280.60372	-0.42286	-0.00027118	0.83213	0.00053365	0.40927	0.00026247	641.3095391928133	72.445	1.0226	72.445	72.085	73.107	0					133	44	4	0	0	0	9.395700000000001E-123	5	6484	6476;6484;6492;6501;6508		243.29	138.54	1	1624700			8137	5742	5707	5713	9338;9339;9340;9341;9342	9339					-0.025361120530988046
EVFDPDANTW	10	Unmodified	_EVFDPDANTW_					0	0	0		nc|ENSG00000076321|Q9Y2M5-2|KLHL20;ENSG00000076321|ENST00000209884|KLHL20	nc|ENSG00000076321|Q9Y2M5-2|KLHL20	nc|ENSG00000076321|Q9Y2M5-2|KLHL20	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.2613525390625	2	597.259111	1192.50367	-0.58427	-0.00034896	1.7375	0.0010378	1.1533	0.00068879	597.2599371545883	77.139	0.53485	77.139	76.848	77.382	0					55	27	3	0	0	0	0.020537	4	7044	7035;7040;7044;7051		120.87	51.241	1	320940			8138	1355	5708	5714	9343;9344;9345;9346	9345					-0.0848834938692562
EVFTALPQC	9	Unmodified	_EVFTALPQC_					0	0	0		ENST00000459979.2_1_2:177003880-177004030:+|nuORF	ENST00000459979.2_1_2:177003880-177004030:+|nuORF	ENST00000459979.2_1_2:177003880-177004030:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.80548095703125	2	504.24696	1006.47937	-0.32793	-0.00016536	-4.1687	-0.002102	-4.4966	-0.0022674	504.24460815385413	32.492	0.85933	32.618	32.116	32.975	0.12643					32	19	3	0	0	0	0.20789	1	2215	2215		26.693	0	1	281840			8139	11998	5709	5715	9347	9347					-0.023612810741155954
EVFTGGIGSY	10	Unmodified	_EVFTGGIGSY_					0	0	0		ENST00000562717.1_1_16:50188117-50258568:+|nuORF;nc|ENSG00000121274|Q8NDF8-4|TENT4B;nc|ENSG00000121274|Q8NDF8-2|TENT4B;nc|ENSG00000121274|Q8NDF8|TENT4B;nc|ENSG00000121274|Q8NDF8-3|TENT4B;nc|ENSG00000121274|Q8NDF8-5|TENT4B;ENSG00000121274|ENST00000561678|TENT4B	ENST00000562717.1_1_16:50188117-50258568:+|nuORF	ENST00000562717.1_1_16:50188117-50258568:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	515.247314453125	2	515.248015	1028.48148	-1.1227	-0.00057845	1.397	0.00071983	0.27439	0.00014138	515.24858350644	69.899	0.41986	69.899	69.604	70.024	0					46	22	3	0	0	0	5.1384E-07	4	6230	6213;6220;6230;6236		152.47	81.175	1	616400			8140	3172	5710	5716	9348;9349;9350;9351	9350					-0.03162529064638875
EVFTGGISSY	10	Unmodified	_EVFTGGISSY_					0	0	0		nc|ENSG00000112941|Q5XG87-2|TENT4A;ENSG00000112941|ENST00000230859|TENT4A	nc|ENSG00000112941|Q5XG87-2|TENT4A	nc|ENSG00000112941|Q5XG87-2|TENT4A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.253662109375	2	530.253297	1058.49204	-1.0706	-0.00056768	1.0079	0.00053445	-0.062667	-3.3229E-05	530.2536993167932	67.979	0.99502	67.979	67.627	68.622	0					70	39	2	0	0	0	0.033438	4	6011	6011;6021;6029;6045		113.41	36.637	1	821190			8141	2688	5711	5717	9352;9353;9354;9355	9352					-0.03486546410204028
EVFTNINKEDS	11	Unmodified	_EVFTNINKEDS_					0	0	0			REV__nc|ENSG00000148773|P46013-2|MKI67	REV__nc|ENSG00000148773|P46013-2|MKI67	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3927001953125	2	648.309332	1294.60411	-1.1411	-0.00073982	1.8786	0.0012179	0.73743	0.00047808	648.8097819106127	106.15	0.36839	106.2	106.1	106.47	0.053757					10	8	2	0	0	0	0.17432	1	11282	11282		23.523	0	1	52163	+		8142	15466	5712	5718	9356	9356					-0.031407371238856285
EVGDNDLVY	9	Unmodified	_EVGDNDLVY_					0	0	0		nc|ENSG00000169783|Q96FE5-2|LINGO1;ENSG00000169783|ENST00000355300|LINGO1;ENSG00000174482|ENST00000698399|LINGO2	nc|ENSG00000169783|Q96FE5-2|LINGO1;ENSG00000174482|ENST00000698399|LINGO2	nc|ENSG00000169783|Q96FE5-2|LINGO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2348022460938	2	512.235104	1022.45566	-0.047414	-2.4287E-05	-0.2067	-0.00010588	-0.25411	-0.00013016	512.2348746592111	58.375	1.001	58.361	57.946	58.947	-0.013641					89	34	4	0	0	0	0.64922	1	5305	5305		44.117	3.3386	1	1104700			8143	6524;6937	5713	5719	9357	9357					-0.05467423306959063
EVGDNDLVY	9	Unmodified	_EVGDNDLVY_					0	0	0		nc|ENSG00000169783|Q96FE5-2|LINGO1;ENSG00000169783|ENST00000355300|LINGO1;ENSG00000174482|ENST00000698399|LINGO2	nc|ENSG00000169783|Q96FE5-2|LINGO1;ENSG00000174482|ENST00000698399|LINGO2	nc|ENSG00000169783|Q96FE5-2|LINGO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2342529296875	2	512.235104	1022.45566	0.21698	0.00011114	-0.34707	-0.00017778	-0.13009	-6.6637E-05	512.2348050225129	58.353	1.0465	58.323	57.938	58.985	-0.030159					76	31	4	0	0	0	0.31972	1	5405	5405		63.306	7.8021	1	1335200			8144	6524;6937	5713	5719	9358	9358					-0.05467423306959063
EVGFIVGHY	9	Unmodified	_EVGFIVGHY_					0	0	0		ENSG00000121634|ENST00000369235|GJA8	ENSG00000121634|ENST00000369235|GJA8	ENSG00000121634|ENST00000369235|GJA8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.75714111328125	2	510.761092	1019.50763	0.43122	0.00022025	-3.8362	-0.0019594	-3.405	-0.0017392	510.7591487687917	28.329	0.29079	28.365	28.288	28.579	0.036068					18	9	2	0	0	0	0.67235	1	1348	1348		42.474	5.3154	1	24593			8145	3192	5714	5720	9359	9359					-0.001342151025255589
EVGFIVGHY	9	Unmodified	_EVGFIVGHY_					0	0	0		ENSG00000121634|ENST00000369235|GJA8	ENSG00000121634|ENST00000369235|GJA8	ENSG00000121634|ENST00000369235|GJA8	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	510.761092	1019.50763	-0.46948	-0.00023979	-4.9376	-0.0025219	-5.4071	-0.0027617	511.2593259953386	28.481	0.12024	28.55	28.496	28.617	0.06868	0.11146	-0.0010089	NaN	42.474	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27319			8146	3192	5714	5720							-0.001342151025255589
EVGGEALGRL	10	Unmodified	_EVGGEALGRL_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.7746887207031	2	500.774731	999.534909	-0.80377	-0.00040251	1.3658	0.00068394	0.562	0.00028143	500.7747362480863	49.23	0.89679	49.69	49.34	50.237	0.45983					43	21	3	0	0	0	0.16557	3	4776	4776;4787;4805		93.143	30.165	1	5763100		+	8147	8826;620	5715	5721	9360;9361;9362	9360					0.03512268437862076
EVGGEALGRL	10	Unmodified	_EVGGEALGRL_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7742614746094	2	500.774731	999.534909	0.61522	0.00030809	-0.30038	-0.00015042	0.31484	0.00015766	500.7740443164604	49.06	0.68516	49.964	49.646	50.331	0.90424					39	16	3	0	0	0	0.045977	3	4771	4763;4771;4783		109.48	30.027	1	5673200		+	8148	8826;620	5715	5721	9363;9364;9365	9364					0.03512268437862076
EVGGTSLYEV	10	Unmodified	_EVGGTSLYEV_					0	0	0			REV__ENSG00000113300|ENST00000261951|CNOT6	REV__ENSG00000113300|ENST00000261951|CNOT6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.2572631835938	2	527.258579	1052.50261	-1.7044	-0.00089867	-0.67519	-0.000356	-2.3796	-0.0012547	527.258067551962	25.531	0.60729	25.531	25.33	25.938	0					55	28	3	0	0	0	0.8608	1	941	941		34.173	6.2903	1	154210	+		8149	17988	5716	5722	9366	9366					-0.02154563755811978
EVGIKVDGY	9	Unmodified	_EVGIKVDGY_					0	0	0		ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.25787353515625	2	490.258382	978.502212	2.842	0.0013933	-3.9612	-0.001942	-1.1192	-0.00054869	490.2563055466487	107.75	0.61229	107.72	107.27	107.88	-0.031487					37	14	4	0	0	0	0.77244	1	11952	11952		32.812	2.3088	1	1270300			8150	999	5717	5723	9367	9367					0.012100613149982564
EVGIKVDGY	9	Unmodified	_EVGIKVDGY_					0	0	0		ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	490.258382	978.502212	-0.080509	-3.947E-05	-0.88581	-0.00043427	-0.96631	-0.00047374	490.2577996773107	107.76	0.56724	107.72	107.28	107.85	-0.042404	-0.031909	3.5047E-05	NaN	32.812	33	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1064900			8151	999	5717	5723							0.012100613149982564
EVGIKVDGY	9	Unmodified	_EVGIKVDGY_					0	0	0		ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	490.258382	978.502212	-0.99871	-0.00048963	-0.36469	-0.00017879	-1.3634	-0.00066842	490.25809974439284	107.66	0.67885	107.7	107.18	107.86	0.035622	-0.051853	0.00054601	NaN	32.812	42	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1320200			8152	999	5717	5723							0.012100613149982564
EVGIKVDGY	9	Unmodified	_EVGIKVDGY_					0	0	0		ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	490.258382	978.502212	-0.64125	-0.00031438	-1.1489	-0.00056327	-1.7902	-0.00087765	490.2578178759583	107.71	0.76562	107.85	107.16	107.93	0.13866	0.10395	-0.00022295	NaN	32.812	34	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	430510			8153	999	5717	5723							0.012100613149982564
EVGIKVDGY	9	Unmodified	_EVGIKVDGY_					0	0	0		ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	490.258382	978.502212	0.79325	0.0003889	-2.1267	-0.0010426	-1.3335	-0.00065375	490.257394556559	107.77	0.37024	107.86	107.55	107.92	0.091255	0.11696	-0.0011817	NaN	32.812	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	349900			8154	999	5717	5723							0.012100613149982564
EVGIKVDGY	9	Unmodified	_EVGIKVDGY_					0	0	0		ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	490.258382	978.502212	-1.6467	-0.0008073	0.65503	0.00032113	-0.99166	-0.00048617	490.25864815550443	107.78	0.33096	107.81	107.54	107.87	0.036125	0.0666	0.0015459	NaN	32.812	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	371140			8155	999	5717	5723							0.012100613149982564
EVGIQQIGH	9	Unmodified	_EVGIQQIGH_					0	0	0			REV__nc|ENSG00000060718|P12107-2|COL11A1	REV__nc|ENSG00000060718|P12107-2|COL11A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.76190185546875	2	490.761623	979.508694	-0.22707	-0.00011144	0.7237	0.00035516	0.49663	0.00024373	490.7618440017023	28.038	0.36891	27.999	27.795	28.164	-0.038523					11	7	2	0	0	0	0.76255	1	1384	1384		35.618	2.1027	1	37083	+		8156	15406	5718	5724	9368	9368					0.01811999266374187
EVGLLRGPG	9	Unmodified	_EVGLLRGPG_					0	0	0			REV__ENST00000563810.1_1_8:41685708-41686014:-|nuORF	REV__ENST00000563810.1_1_8:41685708-41686014:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2608947753906	2	449.261259	896.507966	-1.0968	-0.00049275	-0.18393	-8.2631E-05	-1.2807	-0.00057538	449.2607952075847	68.72	0.63625	68.786	68.468	69.105	0.065506					51	27	3	0	0	0	0.78536	1	6164	6164		29.15	2.4566	1	231580	+		8157	28826	5719	5725	9369	9369					0.05557204617332445
EVHKAKFV	8	Unmodified	_EVHKAKFV_					0	0	0			REV__ENST00000604175.5_1_9:90586022-90589430:-|nuORF	REV__ENST00000604175.5_1_9:90586022-90589430:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2786560058594	2	479.279452	956.544351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.845	1	16.763	16.263	17.263	-0.0821								0	0	0	0.29498	1	179	179		26.796	0	1		+		8158	20482	5720	5726	9370	9370					0.0643408151404401
EVIGKITAL	9	Unmodified	_EVIGKITAL_					0	0	0		ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10	ENSG00000086827|ENST00000200135|ZW10	ENSG00000086827|ENST00000200135|ZW10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2929382324219	2	472.294768	942.574983	-1.5163	-0.00071613	1.4074	0.00066472	-0.10885	-5.141E-05	472.295392458913	58.282	0.78897	58.282	58.012	58.801	0					71	31	3	0	0	0	0.19437	2	5037	5037;5056		75.043	12.936	1	412390			8159	1561	5721	5727	9371;9372	9371					0.10139815108414041
EVIGSVAIIPV	11	Unmodified	_EVIGSVAIIPV_					0	0	0			REV__nc|ENSG00000005471|P21439-3|ABCB4	REV__nc|ENSG00000005471|P21439-3|ABCB4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3743896484375	2	548.834257	1095.65396	-0.95894	-0.0005263	-1.8893	-0.0010369	-2.8482	-0.0015632	548.8330679623654	37.329	0.52916	37.34	37.15	37.679	0.011173					19	11	2	0	0	0	0.15416	1	2505	2505		32.812	14.55	1	44069	+		8160	16087	5722	5728	9373	9373					0.10996042342708279
EVIHLALGH	9	Unmodified	_EVIHLALGH_					0	0	0		ENSG00000135763|ENST00000258243|URB2	ENSG00000135763|ENST00000258243|URB2	ENSG00000135763|ENST00000258243|URB2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7804870605469	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.77546	1	8404	8404		31.955	0	1	385180			8161	4051	5723	5729	9374	9374					0.0558918002569726
EVIIPHSGW	9	Unmodified	_EVIIPHSGW_					0	0	0		ENST00000527599.1_1_11:57569484-57571277:+|nuORF;nc|ENSG00000198561|O60716-15|CTNND1;nc|ENSG00000198561|O60716-2|CTNND1;nc|ENSG00000198561|O60716-4|CTNND1;nc|ENSG00000198561|O60716-6|CTNND1;nc|ENSG00000198561|O60716-3|CTNND1;nc|ENSG00000198561|O60716-5|CTNND1;nc|ENSG00000198561|O60716-7|CTNND1;nc|ENSG00000198561|O60716-9|CTNND1;nc|ENSG00000198561|O60716-8|CTNND1;nc|ENSG00000198561|O60716-10|CTNND1;nc|ENSG00000198561|O60716-12|CTNND1;nc|ENSG00000198561|O60716-14|CTNND1;nc|ENSG00000198561|O60716-11|CTNND1;nc|ENSG00000198561|O60716-13|CTNND1;nc|ENSG00000198561|O60716-17|CTNND1;nc|ENSG00000198561|O60716-18|CTNND1;nc|ENSG00000198561|O60716-32|CTNND1;nc|ENSG00000198561|O60716-16|CTNND1;nc|ENSG00000198561|O60716-20|CTNND1;nc|ENSG00000198561|O60716-22|CTNND1;nc|ENSG00000198561|O60716-19|CTNND1;nc|ENSG00000198561|O60716-21|CTNND1;nc|ENSG00000198561|O60716-23|CTNND1;nc|ENSG00000198561|O60716-24|CTNND1;nc|ENSG00000198561|O60716-25|CTNND1;nc|ENSG00000198561|O60716-26|CTNND1;nc|ENSG00000198561|O60716-28|CTNND1;nc|ENSG00000198561|O60716-30|CTNND1;nc|ENSG00000198561|O60716-27|CTNND1;nc|ENSG00000198561|O60716-29|CTNND1;nc|ENSG00000198561|O60716-31|CTNND1;ENSG00000198561|ENST00000399050|CTNND1	ENST00000527599.1_1_11:57569484-57571277:+|nuORF	ENST00000527599.1_1_11:57569484-57571277:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	519.2741088867188	2	519.274367	1036.53418	-1.2126	-0.00062966	1.4319	0.00074357	0.21936	0.00011391	519.2749319121356	62.146	1.4779	62.146	61.714	63.192	0					139	69	3	0	0	0	0.021087	6	5440	5431;5436;5440;5444;5448;5453		124.59	41.307	1	1156600			8162	8287	5724	5730	9375;9376;9377;9378;9379;9380	9377					0.01737473788830357
EVIKEVQEF	9	Unmodified	_EVIKEVQEF_					0	0	0		ENSG00000010278|ENST00000009180|CD9	ENSG00000010278|ENST00000009180|CD9	ENSG00000010278|ENST00000009180|CD9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.79736328125	2	560.797872	1119.58119	-1.1097	-0.00062231	1.3241	0.00074257	0.21445	0.00012026	560.798479639503	54.261	0.61232	54.261	53.961	54.573	0					39	18	3	0	0	0	0.017216	2	4547	4547;4559		127.46	36.685	1	292650			8163	764	5725	5731	9381;9382	9381					0.02618288549274439
EVIKPLVA	8	Unmodified	_EVIKPLVA_					0	0	0		nc|ENSG00000113161|P04035-2|HMGCR;ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR	nc|ENSG00000113161|P04035-2|HMGCR	nc|ENSG00000113161|P04035-2|HMGCR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7795715332031	2	434.778754	867.542954	-1.1228	-0.00048815	3.4102	0.0014827	2.2874	0.00099453	434.7801032015678	43.351	2.0206	43.315	42.595	44.616	-0.035816					155	47	4	0	0	0	0.86791	1	3493	3493		28.254	1.4582	1	2016300			8164	2701	5726	5732	9383	9383					0.10388447425270897
EVIKYKTDP	9	Unmodified	_EVIKYKTDP_					0	0	0		ENSG00000118898|ENST00000345988|PPL	ENSG00000118898|ENST00000345988|PPL	ENSG00000118898|ENST00000345988|PPL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.2474365234375	2	546.800414	1091.58628	-0.6003	-0.00032824	-1.9354	-0.0010583	-2.5357	-0.0013865	546.7992203617266	26.151	0.53165	25.894	25.682	26.214	-0.2572					23	11	3	0	0	0	0.20789	1	1440	1440		37.812	12.237	1	165690			8165	3047	5727	5733	9384	9384					0.04414592411899321
EVIPYTPAM	9	Unmodified	_EVIPYTPAM_					0	0	0		ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.7561340332031	2	510.757161	1019.49977	-0.74948	-0.0003828	1.0526	0.00053763	0.30314	0.00015483	510.75766359448636	73.053	0.67789	73.44	73.084	73.762	0.38779					30	15	3	0	0	0	0.64922	1	8190	8190		44.117	3.5442	1	831590			8166	1821	5728	5734	9385	9385					-0.009201104143130578
EVIPYTPAM	9	Unmodified	_EVIPYTPAM_					0	0	0		ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	ENSG00000100292|ENST00000216117|HMOX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.7567443847656	2	510.757161	1019.49977	0.5932	0.00030298	-0.22872	-0.00011682	0.36448	0.00018616	510.75700533051935	72.928	0.71852	73.482	73.108	73.827	0.55386					29	17	2	0	0	0	0.19953	2	8199	8199;8212		73.975	2.3343	1	1085300			8167	1821	5728	5734	9386;9387	9386					-0.009201104143130578
EVIQEIKSF	9	Unmodified	_EVIQEIKSF_					0	0	0		nc|ENSG00000116747|P10155-3|RO60;chr1:193085040-193091651|60|25.2|0.49|5.68|+|ENST00000367443|RO60,RO60;nc|ENSG00000116747|P10155-5|RO60;chr1:193084657-193091651|60|25.2|0.66|5.25|+|ENST00000367444|RO60,RO60;nc|ENSG00000116747|P10155-4|RO60;ENSG00000116747|ENST00000400968|RO60;nc|ENSG00000116747|P10155-2|RO60	nc|ENSG00000116747|P10155-3|RO60	nc|ENSG00000116747|P10155-3|RO60	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.7998657226562	2	546.800414	1091.58628	-1.0996	-0.00060124	0.63427	0.00034682	-0.46529	-0.00025442	546.8005477816228	60.001	0.54956	60.001	59.806	60.355	0					38	22	2	0	0	0	0.076066	2	5245	5245;5255		98.582	15.832	1	149060			8168	35	5729	5735	9388;9389	9388					0.04414592411899321
EVITLVIIG	9	Unmodified	_EVITLVIIG_					0	0	0		ENST00000256433.5_2_18:44682464-44682551:-|nuORF	ENST00000256433.5_2_18:44682464-44682551:-|nuORF	ENST00000256433.5_2_18:44682464-44682551:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8041076660156	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.379	1	41.338	40.838	41.838	-0.04081								0	0	0	0.2969	1	3107	3107		31.955	1.4512	1				8169	9338	5730	5736	9390	9390					0.11580985768227947
EVIVLQLI	8	Unmodified	_EVIVLQLI_					0	0	0			REV__ENSG00000129083|ENST00000439561|COPB1	REV__ENSG00000129083|ENST00000439561|COPB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8008117675781	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.87922	1	3715	3715		31.955	4.0726	1	269820	+		8170	18805	5731	5737	9391	9391					0.11905003113804469
EVKGFKHKLPL	11	Unmodified	_EVKGFKHKLPL_					0	0	0			REV__nc|ENSG00000106692|O75072-2|FKTN	REV__nc|ENSG00000106692|O75072-2|FKTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.59771728515625	3	432.599324	1294.77614	-1.5737	-0.00068079	-1.1436	-0.0004947	-2.7173	-0.0011755	432.59875141375613	106.97	1.3878	107.11	106.64	108.03	0.13866					68	34	2	0	0	0	0.78309	1	11402	11402		9.2118	0	1	21235000	+		8171	17625	5732	5738	9392	9392					0.14054504144928615
EVKGFKHKLPL	11	Unmodified	_EVKGFKHKLPL_					0	0	0			REV__nc|ENSG00000106692|O75072-2|FKTN	REV__nc|ENSG00000106692|O75072-2|FKTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.5976867675781	3	432.599324	1294.77614	0.73472	0.00031784	-3.5984	-0.0015566	-2.8636	-0.0012388	432.59773549861245	107.06	1.3761	107.15	106.64	108.02	0.091263					138	33	6	0	0	0	0.78309	2	11435	11435;11555		13.508	4.7086	1	14015000	+		8172	17625	5732	5738	9393;9394	9393					0.14054504144928615
EVKKKREPF	9	Unmodified	_EVKKKREPF_					0	0	0		ENSG00000140297|ENST00000396065|GCNT3	ENSG00000140297|ENST00000396065|GCNT3	ENSG00000140297|ENST00000396065|GCNT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.8402709960938	2	580.842948	1159.67134	-0.70798	-0.00041123	-3.4414	-0.0019989	-4.1494	-0.0024101	580.8407660860938	69.805	0.83526	69.876	69.594	70.43	0.071045					106	41	3	0	0	0	0.7932	1	6337	6337		25.574	1.0549	1	12587000			8173	4423	5733	5739	9395	9395					0.09789382668373037
EVKKTLSKQ	9	Unmodified	_EVKKTLSKQ_					0	0	0		ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENST00000472163.1_1_3:75263799-75264780:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8209838867188	2	530.821681	1059.62881	-0.074689	-3.9646E-05	-1.2098	-0.00064217	-1.2845	-0.00068182	530.8208962267565	82.295	1.0035	82.45	81.96	82.964	0.15474					78	23	4	0	0	0	0.77244	1	7898	7898		32.812	2.4947	1	1979200			8174	12258	5734	5740	9396	9396					0.10137987540133508
EVKRPRRRKKK	11	Unmodified	_EVKRPRRRKKK_					0	0	0		chr2:43132480-43137613|16|13.5|0.0|20.36|-|2|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|4	chr2:43132480-43137613|16|13.5|0.0|20.36|-|2|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|4	chr2:43132480-43137613|16|13.5|0.0|20.36|-|2|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3269958496094	3	494.32682	1479.95863	0.075913	3.7526E-05	1.5992	0.00079055	1.6752	0.00082807	494.3275244679942	15.426	0.35091	15.484	15.35	15.7	0.057872					29	11	4	0	0	0	0.8498	1	42	42		6.001	2.7897	1	424000			8175	340	5735	5741	9397	9397					0.2378507633022764
EVKTLQVQAAQ	11	Unmodified	_EVKTLQVQAAQ_					0	0	0		nc|ENSG00000135441|P78537-2|BLOC1S1;ENSG00000135441|ENST00000548925|BLOC1S1	nc|ENSG00000135441|P78537-2|BLOC1S1	nc|ENSG00000135441|P78537-2|BLOC1S1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	607.8407592773438	2	607.840602	1213.66665	-1.1865	-0.00072122	1.2838	0.00078033	0.097261	5.9119E-05	607.8413603198578	31.993	0.62631	31.993	31.801	32.428	0					37	23	2	0	0	0	0.72739	1	1574	1574		27.047	0	1	97518			8176	4020	5736	5742	9398	9398					0.06836453734968018
EVKTQKEKVK	10	Unmodified	_EVKTQKEKVK_					0	0	0			REV__nc|ENSG00000133026|P35580|MYH10	REV__nc|ENSG00000133026|P35580|MYH10	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24896240234375	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.76	1	115.78	115.28	116.28	0.026466								0	0	0	0.45132	1	12705	12705		20.837	0	1		+		8177	19050	5737	5743	9399	9399					0.1194561714869451
EVLAHASL	8	Unmodified	_EVLAHASL_					0	0	0		nc|ENSG00000154822|Q9UPR0-2|PLCL2;nc|ENSG00000154822|Q9UPR0-3|PLCL2;ENSG00000154822|ENST00000615277|PLCL2	nc|ENSG00000154822|Q9UPR0-2|PLCL2	nc|ENSG00000154822|Q9UPR0-2|PLCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.23614501953125	2	420.23471	838.454868	0.036063	1.5155E-05	0.14225	5.9776E-05	0.17831	7.4931E-05	420.2345705341308	38.815	0.57835	38.787	38.496	39.074	-0.027843					22	12	2	0	0	0	0.60155	1	2639	2639		71.378	5.5747	1	126260			8178	5299	5738	5744	9400	9400					0.029178268346640834
EVLDLLLPLNL	11	Unmodified	_EVLDLLLPLNL_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.391357421875	2	626.381571	1250.74859	2.3128	0.0014487	4.4673	0.0027982	6.7801	0.0042469	626.8860681580434	110.01	1.5052	110.06	109.66	111.17	0.054062					106	56	2	0	0	0	0.76322	1	13390	13390		19.104	0.77911	1	1083000			8179	8219	5739	5745	9401	9401					0.13324556094062245
EVLDSHIHAY	10	Unmodified	_EVLDSHIHAY_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1;nc|ENSG00000106278|P23471-3|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	592.2900390625	2	592.290745	1182.56694	-1.0934	-0.00064762	-0.21687	-0.00012845	-1.3103	-0.00077607	592.2904576102197	44.023	0.79444	44.023	43.665	44.46	0					43	18	4	0	0	0	0.017366	3	3162	3152;3162;3175		124.59	58.791	1	484940			8180	2287	5740	5746	9402;9403;9404	9403					-0.017043638790028126
EVLGITDD	8	Unmodified	_EVLGITDD_					0	0	0		ENSG00000204764|ENST00000523189|RANBP17;ENST00000522533.5_1_5:170395310-170725859:+|nuORF;ENST00000519949.5_1_5:170395310-170725859:+|nuORF;ENST00000389118.8_1_5:170395310-170711609:+|nuORF;ENST00000520586.5_1_5:170570427-170610199:+|nuORF;ENST00000521759.5_1_5:170570460-170610419:+|nuORF;ENST00000520864.5_1_5:170395310-170632776:+|nuORF;ENST00000519256.5_1_5:170585477-170669877:+|nuORF	ENSG00000204764|ENST00000523189|RANBP17;ENST00000519256.5_1_5:170585477-170669877:+|nuORF	ENSG00000204764|ENST00000523189|RANBP17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.9223937988281	2	431.21364	860.412728	1.2903	0.0005564	0.31231	0.00013467	1.6026	0.00069107	431.2148880811857	33.451	0.21189	33.663	33.566	33.778	0.21168					5	4	2	0	0	0	0.4196	1	2443	2443		24.203	0	1	32961			8181	8486;13132	5741	5747	9405	9405					-0.023061933643930388
EVLGLILRY	9	Unmodified	_EVLGLILRY_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3290405273438	2	538.329142	1074.64373	-0.4776	-0.00025711	0.47484	0.00025562	-0.0027595	-1.4855E-06	538.3292168798735	80.19	1.292	80.606	80.253	81.545	0.41621					68	30	4	0	0	0	2.7308E-13	3	9195	9195;9207;9220		166.78	60.367	1	1862300			8182	8866	5742	5748	9406;9407;9408	9406					0.10939479408125408
EVLGLILRY	9	Unmodified	_EVLGLILRY_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3290405273438	2	538.329142	1074.64373	-0.48349	-0.00026028	0.54623	0.00029405	0.062732	3.3771E-05	538.3292398491958	80.11	1.3312	80.637	80.275	81.607	0.52676					72	31	4	0	0	0	1.3366E-20	4	9220	9208;9220;9233;9245		181.81	62.249	1	1852700			8183	8866	5742	5748	9409;9410;9411;9412	9410					0.10939479408125408
EVLGPSPEG	9	Unmodified	_EVLGPSPEG_					0	0	0		ENSG00000182472|ENST00000328867|CAPN12	ENSG00000182472|ENST00000328867|CAPN12	ENSG00000182472|ENST00000328867|CAPN12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.72265625	2	442.721633	883.428712	0.37013	0.00016386	1.948	0.00086243	2.3181	0.0010263	442.7222188277578	27.775	1.2287	27.811	27.475	28.704	0.03607					60	39	2	0	0	0	0.64922	1	1270	1270		44.117	5.3107	1	168890			8184	7457	5743	5749	9413	9413					-0.017664871274632787
EVLIKNPKLEA	11	Unmodified	_EVLIKNPKLEA_					0	0	0		nc|ENSG00000175216|Q14008-2|CKAP5;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8826904296875	2	627.37682	1252.73909	6.5882	0.0041333	2.0403	0.00128	8.6285	0.0054133	627.3778538382699	111.82	0.62036	111.85	111.67	112.29	0.032707					64	21	4	0	0	0	0.76699	1	13610	13610		18.262	3.3972	1	10130000			8185	6998	5744	5750	9414	9414					0.12282787808521789
EVLIKNPKLEA	11	Unmodified	_EVLIKNPKLEA_					0	0	0		nc|ENSG00000175216|Q14008-2|CKAP5;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8827514648438	2	627.37682	1252.73909	6.5805	0.0041284	2.5751	0.0016156	9.1556	0.005744	627.3785016354675	112.85	0.36639	112.87	112.77	113.14	0.01696					21	13	2	0	0	0	0.72106	1	13670	13670		28.081	3.5623	1	54970			8186	6998	5744	5750	9415	9415					0.12282787808521789
EVLKAVTAL	9	Unmodified	_EVLKAVTAL_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.29254150390625	2	472.294768	942.574983	-1.5163	-0.00071613	1.4074	0.00066472	-0.10885	-5.141E-05	472.295392458913	58.282	0.78897	58.282	58.012	58.801	0					71	31	3	0	0	0	0.28163	2	5046	5029;5046		66.429	4.3219	1	412390			8187	8309	5745	5751	9416;9417	9417					0.10139815108414041
EVLKLLIQAGY	11	Unmodified	_EVLKLLIQAGY_					0	0	0		ENST00000551191.1_1_12:80222078-80226230:-|nuORF;nc|ENSG00000058272|O14974-5|PPP1R12A;nc|ENSG00000058272|O14974-4|PPP1R12A;nc|ENSG00000058272|O14974-3|PPP1R12A;nc|ENSG00000058272|O14974-2|PPP1R12A;ENSG00000058272|ENST00000450142|PPP1R12A	ENST00000551191.1_1_12:80222078-80226230:-|nuORF	ENST00000551191.1_1_12:80222078-80226230:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	623.8714599609375	2	623.873914	1245.73327	-1.2116	-0.00075585	-4.4512	-0.002777	-5.6627	-0.0035328	623.8710403744353	104.48	2.0404	104.58	104.1	106.14	0.093857					153	50	5	0	0	0	0.75164	1	11068	11068		21.686	1.689	1	2931600			8188	1042	5746	5752	9418	9418					0.12023689296847806
EVLLELLGP	9	Unmodified	_EVLLELLGP_					0	0	0			REV__ENSG00000117713|ENST00000324856|ARID1A	REV__ENSG00000117713|ENST00000324856|ARID1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79656982421875	2	491.794601	981.574648	0.16895	8.3091E-05	2.0671	0.0010166	2.2361	0.0010997	491.795491652363	46.653	1.8507	46.639	45.976	47.827	-0.013821					152	52	4	0	0	0	0.74721	1	3893	3893		37.159	5.2042	1	2674700	+		8189	18279	5747	5753	9419	9419					0.08312395388566074
EVLLGWGR	8	Unmodified	_EVLLGWGR_					0	0	0		ENST00000605849.1_1_4:96470971-96471193:+|nuORF	ENST00000605849.1_1_4:96470971-96471193:+|nuORF	ENST00000605849.1_1_4:96470971-96471193:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.7605895996094	2	465.263802	928.513051	-0.31681	-0.0001474	-0.79211	-0.00036854	-1.1089	-0.00051594	465.2636223542735	78.304	0.82656	78.867	78.295	79.121	0.56332					27	19	2	0	0	0	0.4196	1	8987	8987		23.042	0	1	271210			8190	14438	5748	5754	9420	9420					0.04593508479956654
EVLLIIFCL	9	Unmodified	_EVLLIIFCL_					0	0	0		ENSG00000257743|ENST00000477922|MGAM2;nc|ENSG00000257743|Q2M2H8-3|MGAM2	ENSG00000257743|ENST00000477922|MGAM2	ENSG00000257743|ENST00000477922|MGAM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8170776367188	2	531.817021	1061.61949	-0.033042	-1.7573E-05	-0.26586	-0.00014139	-0.2989	-0.00015896	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.74905	1	8868	8868		37.028	8.7742	1	4208000			8191	8908	5749	5755	9421	9421					0.09114502930265189
EVLLLNRS	8	Unmodified	_EVLLLNRS_					0	0	0		nc|ENSG00000143420|O43768-8|ENSA	nc|ENSG00000143420|O43768-8|ENSA	nc|ENSG00000143420|O43768-8|ENSA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.75494384765625	2	472.282192	942.549831	-0.8826	-0.00041684	0.49796	0.00023518	-0.38464	-0.00018166	472.2822622691028	47.529	0.45694	48	47.776	48.233	0.4714					18	11	2	0	0	0	0.4196	1	4550	4550		21.96	0	1	594060			8192	14972	5750	5756	9422	9422					0.0762576030585933
EVLLPEAII	9	Unmodified	_EVLLPEAII_					0	0	0		ENSG00000157502|ENST00000357175|PWWP3B	ENSG00000157502|ENST00000357175|PWWP3B	ENSG00000157502|ENST00000357175|PWWP3B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.8034362792969	2	498.802426	995.590298	-1.4653	-0.00073091	3.9517	0.0019711	2.4863	0.0012402	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.78983	1	4407	4407		27.882	1.0861	1	2964600			8193	5433	5751	5757	9423	9423					0.0923268190562112
EVLLVLGLA	9	Unmodified	_EVLLVLGLA_					0	0	0			REV__ENSG00000100156|ENST00000681075|SLC16A8	REV__ENSG00000100156|ENST00000681075|SLC16A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8000183105469	2	463.799686	925.584819	-0.24475	-0.00011352	3.0643	0.0014212	2.8195	0.0013077	463.8008545525102	46.185	0.71794	46.106	45.759	46.477	-0.079006					36	20	2	0	0	0	0.7932	1	3364	3364		20.482	1.1219	1	192340	+		8194	17145	5752	5758	9424	9424					0.119050031137931
EVLLVLVVVP	10	Unmodified	_EVLLVLVVVP_					0	0	0		ENST00000341189.8_1_X:100878129-100878174:+|nuORF	ENST00000341189.8_1_X:100878129-100878174:+|nuORF	ENST00000341189.8_1_X:100878129-100878174:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.359619140625	2	540.357368	1078.70018	-0.09847	-5.3209E-05	2.5238	0.0013637	2.4253	0.0013105	540.3585531343375	36.951	1.7168	36.927	36.371	38.088	-0.023979					87	38	3	0	0	0	0.88541	1	2380	2380		11.511	0.64546	1	433100			8195	10243	5753	5759	9425	9425					0.16398107244799576
EVLLVVKLL	9	Unmodified	_EVLLVVKLL_					0	0	0		ENST00000555988.1_2_14:75356010-75360059:+|nuORF	ENST00000555988.1_2_14:75356010-75360059:+|nuORF	ENST00000555988.1_2_14:75356010-75360059:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.2930297851562	2	513.352086	1024.68962	0.33835	0.00017369	-3.1729	-0.0016288	-2.8345	-0.0014551	513.3503050665406	52.305	2.978	52.973	51.854	54.832	0.6673					122	71	3	0	0	0	0.20789	1	5463	5463		15.642	0	1	665160			8196	13741	5754	5760	9426	9426					0.17826124590374093
EVLMTEECSM	10	Unmodified	_EVLMTEECSM_					0	0	0			REV__nc|ENSG00000290684|A6NFC9|OR2W5P	REV__nc|ENSG00000290684|A6NFC9|OR2W5P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.2386474609375	2	586.237618	1170.46068	-0.99388	-0.00058265	1.3207	0.00077426	0.32685	0.00019161	586.238310740397	44.944	1.1764	45.788	45.461	46.637	0.84438					57	28	4	0	0	0	0.5766	1	4150	4150		51.335	0	1	3002900	+		8197	30296	5755	5761	9427	9427					-0.1177294682252068
EVLPNRVA	8	Unmodified	_EVLPNRVA_					0	0	0		ENSG00000204271|ENST00000374919|SPIN3	ENSG00000204271|ENST00000374919|SPIN3	ENSG00000204271|ENST00000374919|SPIN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.2607727050781	2	449.261259	896.507966	0.32639	0.00014663	-2.4806	-0.0011144	-2.1542	-0.00096779	449.259982210285	72.745	0.71985	72.787	72.415	73.135	0.042114					49	31	2	0	0	0	0.86677	1	7011	7011		27.882	4.8455	1	206780			8198	8427	5756	5762	9428	9428					0.05557204617332445
EVLQKHLKIM	10	Unmodified	_EVLQKHLKIM_					0	0	0			REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8697509765625	2	619.868108	1237.72166	1.2588	0.00078029	1.242	0.00076985	2.5008	0.0015501	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.86763	1	11467	11467		26.693	4.1133	1	4742500	+		8199	17416	5757	5763	9429	9429					0.11231169001848684
EVLRLRYR	8	Unmodified	_EVLRLRYR_					0	0	0			REV__nc|ENSG00000105737|Q16478-2|GRIK5	REV__nc|ENSG00000105737|Q16478-2|GRIK5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.82958984375	2	552.835457	1103.65636	0.26535	0.0001467	-3.0379	-0.0016795	-2.7726	-0.0015328	553.3350464554798	90.295	1.4454	90.508	89.649	91.094	0.21272					48	34	2	0	0	0	0.4196	1	8963	8963		27.882	5.9224	1	88837	+		8200	17566	5758	5764	9430	9430					0.10867935590999878
EVLSCPIH	8	Unmodified	_EVLSCPIH_					0	0	0		ENST00000556551.2_1_14:74398758-74398887:+|nuORF	ENST00000556551.2_1_14:74398758-74398887:+|nuORF	ENST00000556551.2_1_14:74398758-74398887:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.231689453125	2	449.228571	896.442588	0.59617	0.00026782	3.8501	0.0017296	4.4462	0.0019974	449.2302610410389	83.151	3.4859	83.298	82.027	85.513	0.14694					178	80	3	0	0	0	0.86288	1	8123	8123		26.796	3.7536	1	225870			8201	13751	5759	5765	9431	9431					-0.009775329000376587
EVLSVLVTA	9	Unmodified	_EVLSVLVTA_					0	0	0			REV__ENSG00000255408|ENST00000522353|PCDHA3;REV__ENSG00000204969|ENST00000526136|PCDHA2;REV__ENSG00000204967|ENST00000530339|PCDHA4;REV__ENSG00000250120|ENST00000307360|PCDHA10;REV__nc|ENSG00000204961|Q9Y5H5-2|PCDHA9;REV__nc|ENSG00000204965|Q9Y5H7-2|PCDHA5	REV__ENSG00000250120|ENST00000307360|PCDHA10	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7771301269531	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.261	1	79.208	78.708	79.708	-0.053558								0	0	0	0.28772	1	7927	7927		35.618	1.4457	1		+		8202	23869;23899;23533;23532;30166;30165	5760	5766	9432	9432					0.07575822354465345
EVLTMKRHK	9	Unmodified	_EVLTMKRHK_					0	0	0			REV__nc|ENSG00000140284|O14975-2|SLC27A2	REV__nc|ENSG00000140284|O14975-2|SLC27A2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3309936523438	2	571.32915	1140.64375	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.541	1	70.676	70.176	71.176	0.13506								0	0	0	0.29475	1	6396	6396		32.812	0.85756	1		+		8203	29887	5761	5767	9433	9433					0.07905156136484948
EVLVPRGIGP	10	Unmodified	_EVLVPRGIGP_					0	0	0		nc|ENSG00000116147|Q92752-2|TNR;ENSG00000116147|ENST00000367674|TNR	nc|ENSG00000116147|Q92752-2|TNR	nc|ENSG00000116147|Q92752-2|TNR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	518.8101196289062	2	518.811116	1035.60768	2.7738	0.0014391	-4.2204	-0.0021896	-1.4466	-0.00075052	518.8088155699829	99.047	1.3978	98.992	98.555	99.953	-0.054817					74	32	3	0	0	0	0.8608	1	10693	10693		34.173	0.65696	1	909010			8204	2903	5762	5768	9434	9434					0.09130022231261137
EVLVPRGIGP	10	Unmodified	_EVLVPRGIGP_					0	0	0		nc|ENSG00000116147|Q92752-2|TNR;ENSG00000116147|ENST00000367674|TNR	nc|ENSG00000116147|Q92752-2|TNR	nc|ENSG00000116147|Q92752-2|TNR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	518.8095092773438	2	518.811116	1035.60768	1.0711	0.00055572	-2.754	-0.0014288	-1.6828	-0.00087306	518.8095795388094	98.851	0.8382	98.899	98.543	99.382	0.048157					48	19	3	0	0	0	0.74274	1	10565	10565		42.396	3.1433	1	987710			8205	2903	5762	5768	9435	9435					0.09130022231261137
EVLVPRGIGP	10	Unmodified	_EVLVPRGIGP_					0	0	0		nc|ENSG00000116147|Q92752-2|TNR;ENSG00000116147|ENST00000367674|TNR	nc|ENSG00000116147|Q92752-2|TNR	nc|ENSG00000116147|Q92752-2|TNR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.810302734375	2	518.811116	1035.60768	1.8422	0.00095573	-3.4755	-0.0018031	-1.6333	-0.00084739	518.8092565318011	96.29	1.53	96.695	95.729	97.259	0.40498					70	36	2	0	0	0	0.5766	1	11543	11543		51.335	5.3632	1	2487600			8206	2903	5762	5768	9436	9436					0.09130022231261137
EVLVPRGIGP	10	Unmodified	_EVLVPRGIGP_					0	0	0		nc|ENSG00000116147|Q92752-2|TNR;ENSG00000116147|ENST00000367674|TNR	nc|ENSG00000116147|Q92752-2|TNR	nc|ENSG00000116147|Q92752-2|TNR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8106079101562	2	518.811116	1035.60768	1.9509	0.0010121	-3.6295	-0.001883	-1.6786	-0.0008709	518.8092395464859	98.349	1.5218	98.712	98.319	99.841	0.36308					101	37	4	0	0	0	0.6116	3	11818	11818;11830;11854		49.442	8.6634	1	12004000			8207	2903	5762	5768	9437;9438;9439	9437					0.09130022231261137
EVLVPRGIGP	10	Unmodified	_EVLVPRGIGP_					0	0	0		nc|ENSG00000116147|Q92752-2|TNR;ENSG00000116147|ENST00000367674|TNR	nc|ENSG00000116147|Q92752-2|TNR	nc|ENSG00000116147|Q92752-2|TNR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.81103515625	2	518.811116	1035.60768	2.0333	0.0010549	-3.5591	-0.0018465	-1.5258	-0.00079161	518.8092333336378	100.03	1.6601	100.36	99.811	101.47	0.33295					136	41	4	0	0	0	0.5766	2	12142	12142;12155		51.335	5.3835	1	17274000			8208	2903	5762	5768	9440;9441	9440					0.09130022231261137
EVLVPRGIGP	10	Unmodified	_EVLVPRGIGP_					0	0	0		nc|ENSG00000116147|Q92752-2|TNR;ENSG00000116147|ENST00000367674|TNR	nc|ENSG00000116147|Q92752-2|TNR	nc|ENSG00000116147|Q92752-2|TNR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8101806640625	2	518.811116	1035.60768	1.249	0.000648	-2.9044	-0.0015068	-1.6554	-0.00085883	518.8096033734023	97.807	0.8631	98.198	97.641	98.504	0.39065					64	20	5	0	0	0	0.5766	1	11791	11791		51.335	3.6781	1	3689300			8209	2903	5762	5768	9442	9442					0.09130022231261137
EVLVPRGIGP	10	Unmodified	_EVLVPRGIGP_					0	0	0		nc|ENSG00000116147|Q92752-2|TNR;ENSG00000116147|ENST00000367674|TNR	nc|ENSG00000116147|Q92752-2|TNR	nc|ENSG00000116147|Q92752-2|TNR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8104858398438	2	518.811116	1035.60768	1.4869	0.00077141	-3.1709	-0.0016451	-1.684	-0.00087369	518.8094559796755	98.41	1.4425	98.787	98.408	99.851	0.37679					96	35	4	0	0	0	0.5766	4	11968	11874;11886;11910;11968		51.335	8.6634	1	12414000			8210	2903	5762	5768	9443;9444;9445;9446	9446					0.09130022231261137
EVLVPRGIGP	10	Unmodified	_EVLVPRGIGP_					0	0	0		nc|ENSG00000116147|Q92752-2|TNR;ENSG00000116147|ENST00000367674|TNR	nc|ENSG00000116147|Q92752-2|TNR	nc|ENSG00000116147|Q92752-2|TNR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.81103515625	2	518.811116	1035.60768	2.0617	0.0010696	-3.6499	-0.0018936	-1.5882	-0.00082399	518.8091991124401	100.03	1.7649	100.37	99.779	101.54	0.34591					151	44	5	0	0	0	0.5766	1	12199	12199		51.335	8.9393	1	18229000			8211	2903	5762	5768	9447	9447					0.09130022231261137
EVLYMVYY	8	Unmodified	_EVLYMVYY_					0	0	0		ENST00000510742.1_1_5:68503946-68505623:+|nuORF	ENST00000510742.1_1_5:68503946-68505623:+|nuORF	ENST00000510742.1_1_5:68503946-68505623:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.358642578125	2	540.259536	1078.50452	0.88634	0.00047885	2.5323	0.0013681	3.4187	0.001847	540.260639395153	36.541	1.2918	36.981	36.493	37.785	0.44043					47	30	2	0	0	0	0.4196	1	2987	2987		19.36	0	1	128930			8212	13010	5763	5769	9448	9448					-0.03159226271554871
EVMEEFGVAF	10	Unmodified	_EVMEEFGVAF_					0	0	0			REV__nc|ENSG00000078269|O15056-2|SYNJ2	REV__nc|ENSG00000078269|O15056-2|SYNJ2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.75341796875	2	579.262807	1156.51106	-0.91677	-0.00053105	-0.81379	-0.0004714	-1.7306	-0.0010024	579.2622567928657	78.725	0.87955	78.781	78.289	79.168	0.056114					37	24	3	0	0	0	0.37624	1	7598	7598		25.45	0	1	112620	+		8213	16761	5764	5770	9449	9449					-0.060933331108344646
EVMEHYVSM	9	Unmodified	_EVMEHYVSM_					0	0	0		nc|ENSG00000173011|Q86TJ2-3|TADA2B;nc|ENSG00000173011|Q86TJ2-2|TADA2B;ENSG00000173011|ENST00000310074|TADA2B	nc|ENSG00000173011|Q86TJ2-3|TADA2B	nc|ENSG00000173011|Q86TJ2-3|TADA2B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.2785034179688	2	562.741185	1123.46782	-1.1289	-0.00063527	1.8594	0.0010464	0.73055	0.00041111	562.7420463479946	37.258	0.58012	37.234	37.037	37.617	-0.023979					28	12	3	0	0	0	0.20789	1	2491	2491		24.203	1.1603	1	139270			8214	6816	5765	5771	9450	9450					-0.08897846159766232
EVMRNFKER	9	Unmodified	_EVMRNFKER_					0	0	0			REV__nc|ENSG00000138311|Q70YC5-2|ZNF365	REV__nc|ENSG00000138311|Q70YC5-2|ZNF365	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5753173828125	3	403.545002	1207.61318	-0.16038	-6.4723E-05	2.376	0.00095881	2.2156	0.00089409	403.87924374458703	80.689	0.32874	81.216	81.078	81.406	0.52676					12	7	2	0	0	0	0.20789	1	9334	9334		32.751	8.5187	1	90708	+		8215	19455	5766	5772	9451	9451					0.017673777514573885
EVNKFQMAY	9	Unmodified	_EVNKFQMAY_					0	0	0		ENSG00000140319|ENST00000267884|SRP14	ENSG00000140319|ENST00000267884|SRP14	ENSG00000140319|ENST00000267884|SRP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.27099609375	2	565.270967	1128.52738	0.59455	0.00033608	-0.48934	-0.00027661	0.10521	5.9472E-05	565.2705173972163	50.515	0.57358	50.963	50.724	51.297	0.44761					29	13	3	0	0	0	0.073112	2	4977	4977;4995		99.375	36.069	1	712940			8216	4424	5767	5773	9452;9453	9452					-0.03174207154074793
EVNKFQMAY	9	Unmodified	_EVNKFQMAY_					0	0	0		ENSG00000140319|ENST00000267884|SRP14	ENSG00000140319|ENST00000267884|SRP14	ENSG00000140319|ENST00000267884|SRP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.27197265625	2	565.270967	1128.52738	1.4956	0.00084544	-1.054	-0.00059578	0.44167	0.00024966	565.2701972483615	50.351	0.56822	51.187	50.965	51.534	0.8359					31	13	3	0	0	0	0.073112	2	4969	4960;4969		99.375	33.572	1	982910			8217	4424	5767	5773	9454;9455	9455					-0.03174207154074793
EVNLIDSADY	10	Unmodified	_EVNLIDSADY_					0	0	0		ENST00000381161.5_1_X:2748138-2799251:+|nuORF;nc|ENSG00000056998|O15488-5|GYG2;nc|ENSG00000056998|O15488-4|GYG2;nc|ENSG00000056998|O15488-3|GYG2;nc|ENSG00000056998|O15488-6|GYG2;ENSG00000056998|ENST00000398806|GYG2;nc|ENSG00000056998|O15488|GYG2	ENST00000381161.5_1_X:2748138-2799251:+|nuORF	ENST00000381161.5_1_X:2748138-2799251:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.7664184570312	2	569.766768	1137.51898	0.46006	0.00026213	-1.0026	-0.00057122	-0.54249	-0.0003091	569.7660581679562	61.013	0.36969	61.114	60.87	61.24	0.10082					30	17	2	0	0	0	0.86106	1	5307	5307		33.922	1.1092	1	710990			8218	10944	5768	5774	9456	9456					-0.04427482589699139
EVNLNVAIQFV	11	Unmodified	_EVNLNVAIQFV_					0	0	0			REV__ENSG00000135917|ENST00000644224|SLC19A3	REV__ENSG00000135917|ENST00000644224|SLC19A3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.3868408203125	2	623.34552	1244.67649	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.29	1	111.35	110.85	111.85	0.069542								0	0	0	0.56276	1	11974	11974		26.693	3.1702	1		+		8219	19268	5769	5775	9457	9457					0.06393641740305611
EVNTPLILI	9	Unmodified	_EVNTPLILI_					0	0	0		nc|ENSG00000174227|Q5H8A4-5|PIGG;nc|ENSG00000174227|Q5H8A4-6|PIGG;nc|ENSG00000174227|Q5H8A4-4|PIGG;nc|ENSG00000174227|Q5H8A4-3|PIGG;nc|ENSG00000174227|Q5H8A4-2|PIGG;ENSG00000174227|ENST00000453061|PIGG	nc|ENSG00000174227|Q5H8A4-5|PIGG	nc|ENSG00000174227|Q5H8A4-5|PIGG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.308837890625	2	506.307875	1010.6012	-0.49937	-0.00025284	2.5452	0.0012887	2.0458	0.0010358	506.30921071470516	49.299	2.411	49.324	47.87	50.281	0.025578					89	62	2	0	0	0	0.78058	1	3859	3859		30.504	0	1	190740			8220	6917	5770	5776	9458	9458					0.09632084279917308
EVPDPQQRVSV	11	Unmodified	_EVPDPQQRVSV_					0	0	0		ENSG00000130950|ENST00000253262|NUTM2F;ENSG00000188152|ENST00000372322|NUTM2G	ENSG00000130950|ENST00000253262|NUTM2F	ENSG00000130950|ENST00000253262|NUTM2F	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.858642578125	2	627.327859	1252.64116	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.238	1	70.368	69.868	70.868	0.12965								0	0	0	0.56276	1	6381	6381		31.634	2.4642	1				8221	3700	5771	5777	9459	9459					0.024949792124971282
EVPNKPLRVR	10	Unmodified	_EVPNKPLRVR_					0	0	0		ENSG00000164694|ENST00000297267|FNDC1;nc|ENSG00000164694|Q4ZHG4-2|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.361572265625	2	604.367121	1206.71969	2.4669	0.0014909	-2.8595	-0.0017282	-0.39262	-0.00023729	604.3653535366857	106.62	0.69669	106.75	106.42	107.11	0.12742					48	30	2	0	0	0	0.86218	1	13012	13012		32.812	1.2826	1	128570			8222	5993	5772	5778	9460	9460					0.12459876308253115
EVPRPRKRLT	10	Unmodified	_EVPRPRKRLT_					0	0	0		ENST00000579482.5_1_17:72859347-72866165:-|nuORF;nc|ENSG00000161513|P22570-4|FDXR;nc|ENSG00000161513|P22570-6|FDXR;nc|ENSG00000161513|P22570-5|FDXR;ENST00000577509.5_1_17:72858941-72868963:-|nuORF;nc|ENSG00000161513|P22570|FDXR;ENSG00000161513|ENST00000293195|FDXR;nc|ENSG00000161513|P22570-2|FDXR;nc|ENSG00000161513|P22570-7|FDXR;nc|ENSG00000161513|P22570-3|FDXR	ENST00000579482.5_1_17:72859347-72866165:-|nuORF	ENST00000579482.5_1_17:72859347-72866165:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.382568359375	2	626.385845	1250.75714	2.3214	0.0014541	-2.3972	-0.0015016	-0.075809	-4.7485E-05	626.3841939181601	111.61	0.77419	111.65	111.08	111.85	0.041832					35	26	2	0	0	0	0.37624	1	13521	13521		17.468	11.91	1	1507800			8223	5637	5773	5779	9461	9461					0.14178967573889167
EVQCNFTEKN	10	Unmodified	_EVQCNFTEKN_					0	0	0		ENSG00000184434|ENST00000380055|LRRC19	ENSG00000184434|ENST00000380055|LRRC19	ENSG00000184434|ENST00000380055|LRRC19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.2741088867188	2	606.271695	1210.52884	0.96758	0.00058662	1.5414	0.00093448	2.5089	0.0015211	606.2727822872599	24.818	0.6322	24.49	24.251	24.883	-0.32825					25	13	3	0	0	0	0.85981	1	1224	1224		35.152	4.8343	1	218250			8224	7611	5774	5780	9462	9462					-0.06800617855969904
EVQESGEYR	9	Unmodified	_EVQESGEYR_					0	0	0		ENSG00000143297|ENST00000361835|FCRL5;nc|ENSG00000143297|Q96RD9-3|FCRL5;nc|ENSG00000143297|Q96RD9-4|FCRL5;nc|ENSG00000143297|Q96RD9-2|FCRL5;ENST00000481082.1_1_1:157516005-157522170:-|nuORF;nc|ENSG00000143297|Q96RD9-5|FCRL5	ENSG00000143297|ENST00000361835|FCRL5	ENSG00000143297|ENST00000361835|FCRL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.7490234375	2	548.74891	1095.48327	-0.44606	-0.00024477	0.50743	0.00027845	0.061377	3.3681E-05	548.74904160048	53.71	0.87468	53.705	53.244	54.118	-0.0053711					54	21	4	0	0	0	0.17181	1	4700	4700		79.713	10.926	1	745390			8225	4614	5775	5781	9463	9463					-0.06065520046695383
EVQESGEYR	9	Unmodified	_EVQESGEYR_					0	0	0		ENSG00000143297|ENST00000361835|FCRL5;nc|ENSG00000143297|Q96RD9-3|FCRL5;nc|ENSG00000143297|Q96RD9-4|FCRL5;nc|ENSG00000143297|Q96RD9-2|FCRL5;ENST00000481082.1_1_1:157516005-157522170:-|nuORF;nc|ENSG00000143297|Q96RD9-5|FCRL5	ENSG00000143297|ENST00000361835|FCRL5	ENSG00000143297|ENST00000361835|FCRL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.7487182617188	2	548.74891	1095.48327	0.25472	0.00013977	-0.17511	-9.609E-05	0.079609	4.3685E-05	548.7486872992919	53.73	0.90979	53.753	53.357	54.267	0.022541					60	24	4	0	0	0	0.33718	1	4756	4756		62.107	5.3864	1	884920			8226	4614	5775	5781	9464	9464					-0.06065520046695383
EVQPLHPDK	9	Unmodified	_EVQPLHPDK_					0	0	0		ENSG00000196517|ENST00000372310|SLC6A9;nc|ENSG00000196517|P48067-3|SLC6A9;nc|ENSG00000196517|P48067|SLC6A9	ENSG00000196517|ENST00000372310|SLC6A9	ENSG00000196517|ENST00000372310|SLC6A9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7822875976562	2	531.782556	1061.55056	0.46378	0.00024663	-1.044	-0.00055518	-0.58021	-0.00030855	531.7820031077274	29.432	2.4582	29.343	28.288	30.746	-0.089544					170	57	5	0	0	0	0.11055	1	1819	1819		90.37	18.492	1	12586000			8227	8067	5776	5782	9465	9465					0.022245549548870258
EVQSSVLVK	9	Unmodified	_EVQSSVLVK_					0	0	0			REV__ENSG00000108387|ENST00000672673|SEPTIN4	REV__ENSG00000108387|ENST00000672673|SEPTIN4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7845458984375	2	494.787307	987.560061	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.032	1	17.953	17.453	18.453	-0.078943								0	0	0	0.29273	1	282	282		40.778	1.972	1		+		8228	17706	5777	5783	9466	9466					0.06578323240444206
EVRGTKLVVTG	11	Unmodified	_EVRGTKLVVTG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.84375	2	579.845687	1157.67682	-0.90191	-0.00052297	-1.7617	-0.0010215	-2.6636	-0.0015445	579.8446027793001	102.43	1.6108	102.45	102.08	103.69	0.01989					83	39	4	0	0	0	0.72106	2	10970	10958;10970		28.081	3.5623	1	1265800			8229	5333	5778	5784	9467;9468	9468					0.10429061460172306
EVRGTKLVVTG	11	Unmodified	_EVRGTKLVVTG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	579.8436279296875	2	579.845687	1157.67682	0.68543	0.00039744	-3.4341	-0.0019912	-2.7486	-0.0015938	579.8435684562951	102.05	1.3312	102.24	101.84	103.17	0.19483					96	32	4	0	0	0	0.74763	1	10730	10730		22.58	0.61977	1	2191200			8230	5333	5778	5784	9469	9469					0.10429061460172306
EVRGTKLVVTG	11	Unmodified	_EVRGTKLVVTG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	579.8436889648438	2	579.845687	1157.67682	-1.355	-0.00078567	-1.4577	-0.00084523	-2.8126	-0.0016309	579.8447437223629	102.17	1.0869	102.31	101.93	103.02	0.13569					79	26	4	0	0	0	0.7144	2	10683	10660;10683		29.17	3.5246	1	2038000			8231	5333	5778	5784	9470;9471	9471					0.10429061460172306
EVRMRERELRE	11	Unmodified	_EVRMRERELRE_					0	0	0			REV__ENSG00000130254|ENST00000252542|SAFB2	REV__ENSG00000130254|ENST00000252542|SAFB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.5986328125	3	501.600058	1501.77834	0.45466	0.00022806	-3.5178	-0.0017645	-3.0632	-0.0015365	501.59830819479515	63.888	0.97901	64.443	64.003	64.982	0.55449					70	22	4	0	0	0	0.74002	1	6924	6924		24.276	6.4428	1	672720	+		8232	18860	5779	5785	9472	9472					0.04752564820432781
EVRNLLDKLLP	11	Unmodified	_EVRNLLDKLLP_					0	0	0			REV__ENSG00000117139|ENST00000367265|KDM5B	REV__ENSG00000117139|ENST00000367265|KDM5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2677917480469	3	437.266122	1308.77654	0.28665	0.00012534	3.7471	0.0016385	4.0338	0.0017638	437.2676689275105	50.631	1.3868	50.681	50.015	51.402	0.049896					192	41	5	0	0	0	0.72892	1	3933	3933		26.75	1.6237	1	2963500	+		8233	18247	5780	5786	9473	9473					0.13449879074119053
EVRQRSVS	8	Unmodified	_EVRQRSVS_					0	0	0			REV__nc|ENSG00000125779|Q9BZ23-3|PANK2	REV__nc|ENSG00000125779|Q9BZ23-3|PANK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.9553527832031	2	480.764697	959.514842	-0.49098	-0.00023605	0.58276	0.00028017	0.09178	4.4124E-05	480.7649057588875	19.011	0.29947	18.381	18.233	18.533	-0.6296					11	6	2	0	0	0	0.4196	1	467	467		19.997	9.7315	1	83182	+		8234	18667	5781	5787	9474	9474					0.03346517497914192
EVRSRRHL	8	Unmodified	_EVRSRRHL_					0	0	0			REV__ENST00000454869.1_1_9:97122215-97122404:+|nuORF	REV__ENST00000454869.1_1_9:97122215-97122404:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8076782226562	2	526.807231	1051.59991	2.1591	0.0011374	-1.7045	-0.00089792	0.45462	0.00023949	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.89043	1	12371	12371		35.618	4.0885	1	36320000	+		8235	26935	5782	5788	9475	9475					0.07617307754389913
EVRSRRHL	8	Unmodified	_EVRSRRHL_					0	0	0			REV__ENST00000454869.1_1_9:97122215-97122404:+|nuORF	REV__ENST00000454869.1_1_9:97122215-97122404:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8054809570312	2	526.807231	1051.59991	2.2818	0.0012021	-0.69443	-0.00036583	1.5873	0.00083622	526.8065659132963	103.16	0.35849	103.39	103.23	103.59	0.22556					11	8	2	0	0	0	0.90523	1	12544	12544		40.778	2.9666	1	270770	+		8236	26935	5782	5788	9476	9476					0.07617307754389913
EVRSRRHL	8	Unmodified	_EVRSRRHL_					0	0	0			REV__ENST00000454869.1_1_9:97122215-97122404:+|nuORF	REV__ENST00000454869.1_1_9:97122215-97122404:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8076171875	2	526.807231	1051.59991	2.4511	0.0012913	-1.9686	-0.001037	0.48256	0.00025421	526.8063545435555	100.49	2.2675	100.83	100.38	102.64	0.34591					144	58	4	0	0	0	0.91472	2	12386	12329;12386		54.776	6.8607	1	37709000	+		8237	26935	5782	5788	9477;9478	9478					0.07617307754389913
EVRSRRHL	8	Unmodified	_EVRSRRHL_					0	0	0			REV__ENST00000454869.1_1_9:97122215-97122404:+|nuORF	REV__ENST00000454869.1_1_9:97122215-97122404:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	526.807231	1051.59991	1.2419	0.00065426	-4.685	-0.0024681	-3.443	-0.0018138	527.3050521377326	103.02	1.0456	103.06	102.71	103.75	0.043198	-0.16406	-0.0024831	NaN	40.778	31	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252520	+		8238	26935	5782	5788							0.07617307754389913
EVRVQAPV	8	Unmodified	_EVRVQAPV_					0	0	0		nc|ENSG00000181036|Q6DN72-3|FCRL6;nc|ENSG00000181036|Q6DN72-2|FCRL6;ENSG00000181036|ENST00000368106|FCRL6	nc|ENSG00000181036|Q6DN72-3|FCRL6	nc|ENSG00000181036|Q6DN72-3|FCRL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2612609863281	2	449.261259	896.507966	-0.61479	-0.0002762	-0.29302	-0.00013164	-0.90781	-0.00040784	449.26042265951196	72.866	0.64771	72.825	72.459	73.107	-0.04039					48	22	3	0	0	0	0.90465	1	7122	7122		40.573	1.7665	1	152220			8239	7369	5783	5789	9479	9479					0.05557204617332445
EVSAWYRTEL	10	Unmodified	_EVSAWYRTEL_					0	0	0			REV__ENSG00000114405|ENST00000462069|C3orf14	REV__ENSG00000114405|ENST00000462069|C3orf14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2581787109375	3	418.543544	1252.6088	1.1814	0.00049447	4.1444	0.0017346	5.3258	0.0022291	418.54533172415387	33.973	0.45377	34.278	33.953	34.406	0.30494					14	10	2	0	0	0	0.37624	1	2458	2458		20.03	0	1	121070	+		8240	18045	5784	5790	9480	9480					-0.007398081904739229
EVSFIYHDRVR	11	Unmodified	_EVSFIYHDRVR_					0	0	0			REV__ENSG00000171453|ENST00000642195|POLR1C	REV__ENSG00000171453|ENST00000642195|POLR1C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.2476501464844	3	474.249242	1419.7259	-0.31598	-0.00014985	-2.6521	-0.0012577	-2.968	-0.0014076	474.2479374225976	17.848	0.50885	17.772	17.587	18.096	-0.07671					49	19	4	0	0	0	0.74405	1	253	253		23.378	3.3474	1	318830	+		8241	21730	5785	5791	9481	9481					0.032823497491108355
EVSKIVQTY	9	Unmodified	_EVSKIVQTY_					0	0	0		nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814|ACTN1;ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.79248046875	2	533.792589	1065.57063	-1.2748	-0.00068048	0.10631	5.6748E-05	-1.1685	-0.00062373	533.7925857860391	42.566	0.61313	43	42.765	43.378	0.4334					31	14	3	0	0	0	0.12688	1	3809	3809		87.696	2.5356	1	826210			8242	1269	5786	5792	9482	9482					0.040463058948716935
EVSKIVQTY	9	Unmodified	_EVSKIVQTY_					0	0	0		nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814|ACTN1;ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.7921752929688	2	533.792589	1065.57063	-1.9768	-0.0010552	1.7576	0.00093822	-0.21913	-0.00011697	533.7930020002719	42.385	0.56871	43.082	42.771	43.339	0.69754					29	13	4	0	0	0	0.017216	3	3795	3784;3795;3808		127.46	22.715	1	979330			8243	1269	5786	5792	9483;9484;9485	9484					0.040463058948716935
EVSPGPIW	8	Unmodified	_EVSPGPIW_					0	0	0			REV__ENST00000381154.5_1_X:2838703-2839996:-|nuORF	REV__ENST00000381154.5_1_X:2838703-2839996:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7680969238281	2	442.729261	883.443968	-0.15206	-6.7319E-05	-1.0229	-0.00045289	-1.175	-0.00052021	442.72964124235483	107.69	0.21524	107.65	107.52	107.74	-0.042412					6	4	2	0	0	0	0.4196	1	11713	11713		35.201	4.6971	1	73134	+		8244	25960	5787	5793	9486	9486					-0.002415755396100394
EVSTDETAE	9	Unmodified	_EVSTDETAE_					0	0	0			REV__ENSG00000130560|ENST00000371756|UBAC1	REV__ENSG00000130560|ENST00000371756|UBAC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.7057800292969	2	490.706377	979.3982	-0.22595	-0.00011087	1.9967	0.00097981	1.7708	0.00086894	490.70696263856706	28.177	0.65317	28.137	27.878	28.532	-0.039907					21	14	2	0	0	0	0.62081	1	1395	1395		45.952	5.3793	1	76656	+		8245	18882	5788	5794	9487	9487					-0.09232310303173108
EVSTDETAE	9	Unmodified	_EVSTDETAE_					0	0	0			REV__ENSG00000130560|ENST00000371756|UBAC1	REV__ENSG00000130560|ENST00000371756|UBAC1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	490.706377	979.3982	0.42207	0.00020711	1.1377	0.00055828	1.5598	0.00076539	490.7067589659832	28.073	0.86614	28.109	27.872	28.738	0.036068	-0.16667	-0.00097359	NaN	45.952	46	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78086	+		8246	18882	5788	5794							-0.09232310303173108
EVSTDETAE	9	Unmodified	_EVSTDETAE_					0	0	0			REV__ENSG00000130560|ENST00000371756|UBAC1	REV__ENSG00000130560|ENST00000371756|UBAC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	490.706377	979.3982	-0.76893	-0.00037732	2.5607	0.0012566	1.7918	0.00087924	490.70783632439077	28.213	0.26135	28.281	28.195	28.456	0.068678	0.0056713	0.00042296	NaN	45.952	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73564	+		8247	18882	5788	5794							-0.09232310303173108
EVSTDETAE	9	Unmodified	_EVSTDETAE_					0	0	0			REV__ENSG00000130560|ENST00000371756|UBAC1	REV__ENSG00000130560|ENST00000371756|UBAC1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	490.706377	979.3982	-1.0969	-0.00053827	2.4956	0.0012246	1.3986	0.00068632	490.70743746912774	28.547	0.36504	28.45	28.261	28.626	-0.096945	0.174	0.00035903	NaN	45.952	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37479	+		8248	18882	5788	5794							-0.09232310303173108
EVSTDETAE	9	Unmodified	_EVSTDETAE_					0	0	0			REV__ENSG00000130560|ENST00000371756|UBAC1	REV__ENSG00000130560|ENST00000371756|UBAC1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	490.706377	979.3982	0.69655	0.0003418	0.82524	0.00040495	1.5218	0.00074675	490.7067583081654	28.595	0.33765	28.422	28.294	28.631	-0.17336	0.14602	-0.0012802	NaN	45.952	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44827	+		8249	18882	5788	5794							-0.09232310303173108
EVTATSTGTY	10	Unmodified	_EVTATSTGTY_					0	0	0		ENST00000426402.2_1_7:38402529-38402688:-|nuORF	ENST00000426402.2_1_7:38402529-38402688:-|nuORF	ENST00000426402.2_1_7:38402529-38402688:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	515.2420654296875	2	515.240386	1028.46622	0.33773	0.00017401	-0.29695	-0.000153	0.040782	2.1013E-05	515.2401038031029	47.483	0.76162	47.52	47.314	48.076	0.037731					48	27	3	0	0	0	0.43769	2	3576	3557;3576		60.972	6.6965	1	705570			8250	11550	5789	5795	9488;9489	9489					-0.04687440652492114
EVTEFLLLGL	10	Unmodified	_EVTEFLLLGL_					0	0	0		ENSG00000172464|ENST00000544374|OR5AP2	ENSG00000172464|ENST00000544374|OR5AP2	ENSG00000172464|ENST00000544374|OR5AP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.329833984375	2	567.326265	1132.63798	1.8589	0.0010546	4.3547	0.0024705	6.2136	0.0035251	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86718	1	9946	9946		27.882	0	1	15439000			8251	6771	5790	5796	9490	9490					0.07696336105800583
EVTKPPVKKK	10	Unmodified	_EVTKPPVKKK_					0	0	0			REV__nc|ENSG00000165626|Q8N7W2-2|BEND7	REV__nc|ENSG00000165626|Q8N7W2-2|BEND7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.3665771484375	2	577.368798	1152.72304	-0.96039	-0.0005545	-2.9913	-0.0017271	-3.9517	-0.0022816	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.85934	1	10956	10956		35.618	0	1	9850700	+		8252	21197	5791	5797	9491	9491					0.15279126362247553
EVTKPPVKKK	10	Unmodified	_EVTKPPVKKK_					0	0	0			REV__nc|ENSG00000165626|Q8N7W2-2|BEND7	REV__nc|ENSG00000165626|Q8N7W2-2|BEND7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3665771484375	2	577.368798	1152.72304	-1.363	-0.00078696	-2.7149	-0.0015675	-4.0779	-0.0023544	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.86718	1	10753	10753		27.882	0	1	14386000	+		8253	21197	5791	5797	9492	9492					0.15279126362247553
EVTRPCSYSKK	11	Unmodified	_EVTRPCSYSKK_					0	0	0		nc|ENSG00000185989|Q14644-2|RASA3;ENSG00000185989|ENST00000334062|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.2218322753906	3	433.223817	1296.64962	-0.043552	-1.8868E-05	-2.5237	-0.0010933	-2.5673	-0.0011122	433.222614821168	61.94	0.78705	61.907	61.546	62.333	-0.033169					48	19	3	0	0	0	0.71803	1	5842	5842		28.577	1.827	1	852780			8254	7767	5792	5798	9493	9493					0.013162098574639458
EVVETNLV	8	Unmodified	_EVVETNLV_					0	0	0		ENSG00000152208|ENST00000282020|GRID2;ENST00000505687.5_1_4:93225807-94138074:+|nuORF;nc|ENSG00000152208|O43424-2|GRID2	ENSG00000152208|ENST00000282020|GRID2;nc|ENSG00000152208|O43424-2|GRID2	nc|ENSG00000152208|O43424-2|GRID2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.74517822265625	2	451.745108	901.475663	-0.61831	-0.00027932	2.3255	0.0010506	1.7072	0.00077123	451.7459480558959	34.844	1.0293	34.787	34.355	35.384	-0.056385					46	23	3	0	0	0	0.92973	1	2190	2190		50.025	2.1089	1	301340			8255	5161;14995	5793	5799	9494	9494					0.020983724236771195
EVVGELPP	8	Unmodified	_EVVGELPP_					0	0	0		ENST00000514070.1_1_4:56263407-56263473:+|nuORF	ENST00000514070.1_1_4:56263407-56263473:+|nuORF	ENST00000514070.1_1_4:56263407-56263473:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.22735595703125	2	420.229094	838.443634	-0.18765	-7.8855E-05	-2.6467	-0.0011122	-2.8344	-0.0011911	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.90465	1	7545	7545		40.573	4.9543	1	743780			8256	13064	5794	5800	9495	9495					0.01795004740540662
EVVGVEPR	8	Unmodified	_EVVGVEPR_					0	0	0		ENSG00000109670|ENST00000281708|FBXW7	ENSG00000109670|ENST00000281708|FBXW7	ENSG00000109670|ENST00000281708|FBXW7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7446594238281	2	442.745442	883.476331	0.39735	0.00017592	-1.8334	-0.00081175	-1.4361	-0.00063583	442.74450802650625	89.278	0.7365	89.729	89.448	90.184	0.45058					60	17	4	0	0	0	0.87792	1	10509	10509		31.53	1.0262	1	3535200			8257	2473	5795	5801	9496	9496					0.029932118633723803
EVVKQLLPELR	11	Unmodified	_EVVKQLLPELR_					0	0	0			REV__ENSG00000176903|ENST00000316836|PNMA1	REV__ENSG00000176903|ENST00000316836|PNMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.93963623046875	3	441.938005	1322.79219	-0.1083	-4.7863E-05	4.2281	0.0018686	4.1198	0.0018207	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.75779	1	4969	4969		20.315	1.0523	1	447080	+		8258	22154	5796	5802	9497	9497					0.1437016559116273
EVVLEAFRSG	10	Unmodified	_EVVLEAFRSG_					0	0	0			REV__nc|ENSG00000165194|Q8TAB3-3|PCDH19	REV__nc|ENSG00000165194|Q8TAB3-3|PCDH19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2952270507812	2	553.795663	1105.57677	-1.1091	-0.00061423	-0.14458	-8.0067E-05	-1.2537	-0.00069429	553.7962542953013	71.908	1.7842	72.293	71.504	73.288	0.38519					127	42	6	0	0	0	0.82886	1	7997	7997		37.812	4.9991	1	1264400	+		8259	15940	5797	5803	9498	9498					0.02820824126365551
EVVLKAFRFV	10	Unmodified	_EVVLKAFRFV_					0	0	0			REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF	REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3688354492188	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.69	1	117.67	117.17	118.17	-0.02433								0	0	0	0.45132	1	13032	13032		24.519	13.654	1		+		8260	27310	5798	5804	9499	9499					0.11739143707836774
EVVLKAFRFV	10	Unmodified	_EVVLKAFRFV_					0	0	0			REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF	REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3665161132812	2	604.363516	1206.71248	0.90474	0.00054679	3.9121	0.0023643	4.8168	0.0029111	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.85979	3	11316	11316;11375;11449		39.253	23.611	1	105740000	+		8261	27310	5798	5804	9500;9501;9502	9500					0.11739143707836774
EVVLKAFRFV	10	Unmodified	_EVVLKAFRFV_					0	0	0			REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF	REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3645629882812	2	604.363516	1206.71248	2.3603	0.0014265	2.8185	0.0017034	5.1787	0.0031298	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.8583	1	12944	12944		17.468	0	1	5984800	+		8262	27310	5798	5804	9503	9503					0.11739143707836774
EVVLKAFRFV	10	Unmodified	_EVVLKAFRFV_					0	0	0			REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF	REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3665771484375	2	604.363516	1206.71248	3.6458	0.0022034	1.558	0.00094162	5.2038	0.003145	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.86089	2	12854	12774;12854		36.447	6.129	1	5883900	+		8263	27310	5798	5804	9504;9505	9505					0.11739143707836774
EVVLPPLELAK	11	Unmodified	_EVVLPPLELAK_					0	0	0			REV__ENSG00000119041|ENST00000263956|GTF3C3	REV__ENSG00000119041|ENST00000263956|GTF3C3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2470397949219	3	403.248068	1206.72238	-0.96192	-0.00038789	-1.9031	-0.00076743	-2.865	-0.0011553	403.2472281244655	104.88	3.5231	104.88	103.72	107.24	0					230	83	5	0	0	0	0.74022	1	10775	10775		22.075	0	1	5402700	+		8264	18337	5799	5805	9506	9506					0.12728286922560983
EVVLPPLELAK	11	Unmodified	_EVVLPPLELAK_					0	0	0			REV__ENSG00000119041|ENST00000263956|GTF3C3	REV__ENSG00000119041|ENST00000263956|GTF3C3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.366455078125	2	604.368464	1206.72238	-0.16822	-0.00010167	-3.1319	-0.0018928	-3.3001	-0.0019945	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.7144	1	10795	10795		29.17	1.0886	1	47715000	+		8265	18337	5799	5805	9507	9507					0.12728286922560983
EVVLPPLELAK	11	Unmodified	_EVVLPPLELAK_					0	0	0			REV__ENSG00000119041|ENST00000263956|GTF3C3	REV__ENSG00000119041|ENST00000263956|GTF3C3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2468566894531	3	403.248068	1206.72238	-0.18602	-7.5014E-05	-2.7022	-0.0010897	-2.8882	-0.0011647	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.75906	1	11284	11284		13.73	0	1	12308000	+		8266	18337	5799	5805	9508	9508					0.12728286922560983
EVVLPPLELAK	11	Unmodified	_EVVLPPLELAK_					0	0	0			REV__ENSG00000119041|ENST00000263956|GTF3C3	REV__ENSG00000119041|ENST00000263956|GTF3C3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3667602539062	2	604.368464	1206.72238	-0.48563	-0.0002935	-2.8288	-0.0017096	-3.3144	-0.0020031	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.72106	1	11551	11551		28.081	1.3886	1	63350000	+		8267	18337	5799	5805	9509	9509					0.12728286922560983
EVVLPPLELAK	11	Unmodified	_EVVLPPLELAK_					0	0	0			REV__ENSG00000119041|ENST00000263956|GTF3C3	REV__ENSG00000119041|ENST00000263956|GTF3C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2469482421875	3	403.248068	1206.72238	-1.7912	-0.0007223	-1.1732	-0.00047308	-2.9644	-0.0011954	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.732	3	11041	11041;11065;11077		18.332	0	1	20673000	+		8268	18337	5799	5805	9510;9511;9512	9510					0.12728286922560983
EVVLPPLELAK	11	Unmodified	_EVVLPPLELAK_					0	0	0			REV__ENSG00000119041|ENST00000263956|GTF3C3	REV__ENSG00000119041|ENST00000263956|GTF3C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3665771484375	2	604.368464	1206.72238	1.0484	0.00063359	-4.3277	-0.0026155	-3.2793	-0.0019819	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.7144	2	11094	11094;11217		29.17	2.1227	1	105850000	+		8269	18337	5799	5805	9513;9514	9513					0.12728286922560983
EVVLPPLELAK	11	Unmodified	_EVVLPPLELAK_					0	0	0			REV__ENSG00000119041|ENST00000263956|GTF3C3	REV__ENSG00000119041|ENST00000263956|GTF3C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2467346191406	3	403.248068	1206.72238	0.73411	0.00029603	-3.7	-0.001492	-2.9659	-0.001196	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.75544	1	11053	11053		14.243	0	1	18617000	+		8270	18337	5799	5805	9515	9515					0.12728286922560983
EVVLPPLELAK	11	Unmodified	_EVVLPPLELAK_					0	0	0			REV__ENSG00000119041|ENST00000263956|GTF3C3	REV__ENSG00000119041|ENST00000263956|GTF3C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2467346191406	3	403.248068	1206.72238	-1.9293	-0.00077799	-1.0451	-0.00042145	-2.9745	-0.0011994	403.24758115209465	104.53	3.0767	104.62	103.79	106.87	0.093857					248	75	5	0	0	0	0.72739	3	11038	11014;11038;11050		24.276	0	1	9819800	+		8271	18337	5799	5805	9516;9517;9518	9517					0.12728286922560983
EVVLPPLELAK	11	Unmodified	_EVVLPPLELAK_					0	0	0			REV__ENSG00000119041|ENST00000263956|GTF3C3	REV__ENSG00000119041|ENST00000263956|GTF3C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3662109375	2	604.368464	1206.72238	-1.2751	-0.0007706	-2.0171	-0.0012191	-3.2921	-0.0019897	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.70737	3	11084	11048;11072;11084		30.318	3.596	1	103250000	+		8272	18337	5799	5805	9519;9520;9521	9521					0.12728286922560983
EVVLPPLELAK	11	Unmodified	_EVVLPPLELAK_					0	0	0			REV__ENSG00000119041|ENST00000263956|GTF3C3	REV__ENSG00000119041|ENST00000263956|GTF3C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3676147460938	2	604.368464	1206.72238	-1.2751	-0.00077064	-1.2835	-0.00077571	-2.5586	-0.0015464	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.78658	1	12195	12195		14.137	1.9303	1	3346600	+		8273	18337	5799	5805	9522	9522					0.12728286922560983
EVVLTGHKTL	10	Unmodified	_EVVLTGHKTL_					0	0	0			REV__ENSG00000163501|ENST00000295731|IHH	REV__ENSG00000163501|ENST00000295731|IHH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.8504028320312	2	548.821681	1095.62881	-1.7797	-0.00097676	-2.8931	-0.0015878	-4.6729	-0.0025646	548.8199133674427	41.683	1.0805	42.317	41.988	43.068	0.6339					44	27	2	0	0	0	0.37624	1	3692	3692		24.519	0.99649	1	877780	+		8274	20924	5800	5806	9523	9523					0.08481987540153568
EVVPVQFLLC	10	Unmodified	_EVVPVQFLLC_					0	0	0		chr16:53695458-53696151|63|10.37|0.37|4.81|-|ENST00000679110|RPGRIP1L,RPGRIP1L	chr16:53695458-53696151|63|10.37|0.37|4.81|-|ENST00000679110|RPGRIP1L,RPGRIP1L	chr16:53695458-53696151|63|10.37|0.37|4.81|-|ENST00000679110|RPGRIP1L,RPGRIP1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	573.8170166015625	2	573.81501	1145.61547	0.47187	0.00027077	2.9596	0.0016983	3.4315	0.001969	573.8166375827257	36.087	1.0388	36.026	35.489	36.528	-0.060337					75	29	4	0	0	0	0.5766	1	1936	1936		51.335	1.8939	1	912290			8275	207	5801	5807	9524	9524					0.04848413436570809
EVVSEPFRSF	10	Unmodified	_EVVSEPFRSF_					0	0	0		nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2;ENSG00000175166|ENST00000310118|PSMD2;ENST00000496925.5_1_3:184023699-184025408:+|nuORF	nc|ENSG00000175166|Q13200-2|PSMD2	nc|ENSG00000175166|Q13200-2|PSMD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.801513671875	2	598.800946	1195.58734	-0.77716	-0.00046537	1.0584	0.00063379	0.28126	0.00016842	598.8013448272425	63.345	0.56187	63.345	63.143	63.704	0					43	24	2	0	0	0	0.76096	1	5556	5556		41.427	6.2746	1	108740			8276	6993	5802	5808	9525	9525					-0.0026319321921164374
EVVSKRALMN	10	Unmodified	_EVVSKRALMN_					0	0	0			REV__nc|ENSG00000104093|Q8TDJ6|DMXL2	REV__nc|ENSG00000104093|Q8TDJ6|DMXL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.81689453125	2	573.818615	1145.62268	0.47618	0.00027324	-3.239	-0.0018586	-2.7628	-0.0015853	573.8166032618375	36.182	1.0397	36.213	35.726	36.765	0.031132					71	29	3	0	0	0	0.42393	1	1962	1962		62.107	5.3864	1	967530	+		8277	17435	5803	5809	9526	9526					0.05569146036964412
EVVVPVLSGL	10	Unmodified	_EVVVPVLSGL_					0	0	0			REV__ENSG00000124608|ENST00000244571|AARS2	REV__ENSG00000124608|ENST00000244571|AARS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.3529357910156	2	506.307875	1010.6012	-0.24449	-0.00012379	2.5043	0.0012679	2.2598	0.0011442	506.81084162822145	52.589	0.99434	53.013	52.638	53.632	0.42348					36	23	2	0	0	0	0.37624	1	5252	5252		26.693	3.6504	1	176480	+		8278	18600	5804	5810	9527	9527					0.09632084279917308
EVVYLKVG	8	Unmodified	_EVVYLKVG_					0	0	0		ENST00000529111.5_1_11:83344252-84634162:-|nuORF;nc|ENSG00000150672|Q15700-3|DLG2;nc|ENSG00000150672|Q15700|DLG2;nc|ENSG00000150672|Q15700-4|DLG2;ENSG00000150672|ENST00000376104|DLG2	ENST00000529111.5_1_11:83344252-84634162:-|nuORF	ENST00000529111.5_1_11:83344252-84634162:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.7660827636719	2	453.768386	905.522219	-1.8618	-0.00084484	-4.196	-0.001904	-6.0578	-0.0027489	453.76637939924865	41.209	0.88986	41.209	40.877	41.766	0					61	26	3	0	0	0	0.88915	1	2810	2810		35.201	1.6851	1	304750			8279	5078	5805	5811	9528	9528					0.0656785704561571
EVWLAVNDY	9	Unmodified	_EVWLAVNDY_					0	0	0		ENSG00000159189|ENST00000374640|C1QC	ENSG00000159189|ENST00000374640|C1QC	ENSG00000159189|ENST00000374640|C1QC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.766357421875	2	554.769114	1107.52368	-0.22767	-0.0001263	-2.3303	-0.0012928	-2.558	-0.0014191	554.7672775876852	34.559	0.95993	34.565	34.015	34.975	0.0063934					45	22	3	0	0	0	0.38563	1	2103	2103		58.782	2.3482	1	134960			8280	5513	5806	5812	9529	9529					-0.02578553656303484
EVYCIVSRL	9	Unmodified	_EVYCIVSRL_					0	0	0		ENSG00000146966|ENST00000496613|DENND2A;nc|ENSG00000146966|Q9ULE3-2|DENND2A	ENSG00000146966|ENST00000496613|DENND2A	ENSG00000146966|ENST00000496613|DENND2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.2871704101562	2	541.289159	1080.56377	-0.80121	-0.00043369	-1.848	-0.0010003	-2.6492	-0.001434	541.2879299434815	70.479	0.87196	70.864	70.506	71.378	0.38416					58	20	4	0	0	0	0.77244	1	7845	7845		32.812	4.9302	1	870440			8281	4873	5807	5813	9530	9530					0.026706697426334358
EVYDPTTNAW	10	Unmodified	_EVYDPTTNAW_					0	0	0		nc|ENSG00000109466|O95198-3|KLHL2;ENSG00000109466|ENST00000226725|KLHL2;nc|ENSG00000109466|O95198-2|KLHL2	nc|ENSG00000109466|O95198-3|KLHL2	nc|ENSG00000109466|O95198-3|KLHL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.7661743164062	2	598.266936	1194.51932	-0.68772	-0.00041144	1.2205	0.00073016	0.53274	0.00031872	598.7695095504597	69.726	0.33182	69.726	69.478	69.81	0					36	16	3	0	0	0	0.51401	1	6223	6223		54.722	15.47	1	119760			8282	2463	5808	5814	9531	9531					-0.07016062869888628
EVYGWGYN	8	Unmodified	_EVYGWGYN_					0	0	0		nc|ENSG00000136144|Q8NDN9-2|RCBTB1;ENSG00000136144|ENST00000378302|RCBTB1	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.3010559082031	2	494.213975	986.413397	0.99695	0.0004927	3.7456	0.0018511	4.7426	0.0023438	494.2154198135772	96.978	0.19914	97.383	97.219	97.418	0.40498					5	4	2	0	0	0	0.4196	1	11620	11620		40.573	8.6178	1	50847			8283	4090	5809	5815	9532	9532					-0.08035353924674382
EVYKLMSE	8	Unmodified	_EVYKLMSE_					0	0	0			REV__ENSG00000182415|ENST00000250838|CDY2A	REV__ENSG00000182415|ENST00000250838|CDY2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.7471008300781	2	499.746793	997.479033	-0.85273	-0.00042615	1.1589	0.00057914	0.30615	0.000153	499.74724797378053	74.742	3.1094	75.133	73.907	77.016	0.3911					155	76	3	0	0	0	0.9283	1	8431	8431		49.442	1.5259	1	1032200	+		8284	18836	5810	5816	9533	9533					-0.0198070079397894
EWAEVVINV	9	Unmodified	_EWAEVVINV_					0	0	0		ENSG00000069248|ENST00000261396|NUP133	ENSG00000069248|ENST00000261396|NUP133	ENSG00000069248|ENST00000261396|NUP133	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7810668945312	2	529.779482	1057.54441	0.065511	3.4706E-05	2.8466	0.0015081	2.9121	0.0015428	529.7807903370734	52.522	1.485	53.136	52.584	54.069	0.61446					111	35	5	0	0	0	0.69624	1	5304	5304		40.778	5.1599	1	6729200			8285	1216	5811	5817	9534	9534					0.017940367233904908
EWETSLSWRVK	11	Unmodified	_EWETSLSWRVK_					0	0	0			REV__ENST00000530160.1_1_16:70548383-70553585:-|nuORF	REV__ENST00000530160.1_1_16:70548383-70553585:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	474.2480773925781	3	474.245498	1419.71466	0.99317	0.00047101	3.9768	0.001886	4.97	0.002357	474.24733219694247	17.591	0.36703	17.666	17.534	17.902	0.075441					40	13	4	0	0	0	0.74022	1	190	190		24.232	0	1	322140	+		8286	28278	5812	5818	9535	9535					0.021595276549760456
EWFTTQSE	8	Unmodified	_EWFTTQSE_					0	0	0		CON__Q9D646	CON__Q9D646	CON__Q9D646	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.219970703125	2	514.221997	1026.42944	0.35237	0.00018119	-4.1505	-0.0021343	-3.7981	-0.0019531	514.2197422056641	29.563	0.92425	29.594	29.101	30.025	0.030945					66	27	3	0	0	0	0.91472	1	1461	1461		44.117	3.3386	1	300180		+	8287	638	5813	5819	9536	9536					-0.08271692478410841
EWGQNEQPGY	10	Unmodified	_EWGQNEQPGY_					0	0	0		nc|ENSG00000151779|A2RRP1-2|NBAS;ENSG00000151779|ENST00000281513|NBAS	nc|ENSG00000151779|A2RRP1-2|NBAS	nc|ENSG00000151779|A2RRP1-2|NBAS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.7624816894531	3	403.171999	1206.49417	1.7119	0.00069017	-3.5931	-0.0014486	-1.8812	-0.00075845	403.17054223720527	24.547	0.44596	24.034	23.835	24.281	-0.51365					11	9	2	0	0	0	0.37624	1	1192	1192		30.569	19.114	1	38286			8288	5141	5814	5820	9537	9537					-0.10082117672436652
EWIQWRERQWD	11	Unmodified	_EWIQWRERQWD_					0	0	0			REV__nc|ENSG00000047648|O43182-4|ARHGAP6	REV__nc|ENSG00000047648|O43182-4|ARHGAP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.59765625	3	544.595301	1630.76407	0.77982	0.00042469	3.403	0.0018533	4.1829	0.002278	544.5970482837994	18.741	1.154	18.815	18.483	19.637	0.073465					87	38	5	0	0	0	0.79224	2	319	319;325		12.957	6.9564	1	464850	+		8289	16358	5815	5821	9538;9539	9538					-0.02607764336244145
EWIQWRERQWD	11	Unmodified	_EWIQWRERQWD_					0	0	0			REV__nc|ENSG00000047648|O43182-4|ARHGAP6	REV__nc|ENSG00000047648|O43182-4|ARHGAP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.5973510742188	3	544.595301	1630.76407	0.98936	0.0005388	3.1692	0.0017259	4.1586	0.0022647	544.5968958201821	19.125	0.85039	19.05	18.752	19.602	-0.074974					76	31	5	0	0	0	0.81407	2	404	386;404		8.4073	3.5211	1	439030	+		8290	16358	5815	5821	9540;9541	9541					-0.02607764336244145
EWIQWRERQWD	11	Unmodified	_EWIQWRERQWD_					0	0	0			REV__nc|ENSG00000047648|O43182-4|ARHGAP6	REV__nc|ENSG00000047648|O43182-4|ARHGAP6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.9318237304688	3	544.595301	1630.76407	0.013729	7.4765E-06	4.1399	0.0022546	4.1537	0.0022621	544.5975442812853	18.39	0.65404	17.913	17.703	18.357	-0.47694					29	13	3	0	0	0	0.79716	1	397	397		11.932	5.6115	1	289970	+		8291	16358	5815	5821	9542	9542					-0.02607764336244145
EWIQWRERQWD	11	Unmodified	_EWIQWRERQWD_					0	0	0			REV__nc|ENSG00000047648|O43182-4|ARHGAP6	REV__nc|ENSG00000047648|O43182-4|ARHGAP6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2923278808594	4	408.698295	1630.76407	0.002685	1.0974E-06	4.3164	0.0017641	4.3191	0.0017652	408.7003962683545	19.982	1.0989	19.353	18.801	19.9	-0.6296					51	23	4	0	0	0	0.18318	1	656	656		9.6461	3.6451	1	373900	+		8292	16358	5815	5821	9543	9543					-0.02607764336244145
EWLHESCWPSF	11	Unmodified	_EWLHESCWPSF_					0	0	0			REV__ENST00000290551.4_1_1:203277738-203278125:+|nuORF	REV__ENST00000290551.4_1_1:203277738-203278125:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	474.5399169921875	3	474.204534	1419.59177	0.098079	4.651E-05	2.1266	0.0010084	2.2247	0.0010549	474.2054718771727	25.419	0.40124	25.524	25.33	25.731	0.1054					32	20	2	0	0	0	0.74022	1	907	907		24.232	2.4514	1	109720	+		8293	24656	5816	5822	9544	9544					-0.10124052067931189
EWLHESCWPSF	11	Unmodified	_EWLHESCWPSF_					0	0	0			REV__ENST00000290551.4_1_1:203277738-203278125:+|nuORF	REV__ENST00000290551.4_1_1:203277738-203278125:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	473.8056335449219	3	474.204534	1419.59177	0.056168	2.6635E-05	1.6983	0.00080535	1.7545	0.00083199	474.20546268248427	18.814	1.0003	18.88	18.503	19.504	0.066298					64	50	2	0	0	0	0.1745	1	340	340		17.833	3.1395	1	202150	+		8294	24656	5816	5822	9545	9545					-0.10124052067931189
EWLHESCWPSF	11	Unmodified	_EWLHESCWPSF_					0	0	0			REV__ENST00000290551.4_1_1:203277738-203278125:+|nuORF	REV__ENST00000290551.4_1_1:203277738-203278125:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	474.204534	1419.59177	-1.0183	-0.00048288	2.5556	0.0012119	1.5373	0.000729	474.205584432522	25.683	0.33581	25.746	25.575	25.911	0.063122	0.11065	0.00035775	NaN	24.232	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80807	+		8295	24656	5816	5822							-0.10124052067931189
EWLHESCWPSF	11	Unmodified	_EWLHESCWPSF_					0	0	0			REV__ENST00000290551.4_1_1:203277738-203278125:+|nuORF	REV__ENST00000290551.4_1_1:203277738-203278125:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	474.204534	1419.59177	0.098079	4.651E-05	2.1266	0.0010084	2.2247	0.0010549	474.2054718771727	25.419	0.40124	25.524	25.33	25.731	0.1054	-0.11065	-0.00025258	NaN	24.232	32	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109720	+		8296	24656	5816	5822							-0.10124052067931189
EWNKGCLVL	9	Unmodified	_EWNKGCLVL_					0	0	0			REV__ENSG00000184544|ENST00000571134|DHRS7C	REV__ENSG00000184544|ENST00000571134|DHRS7C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2759399414062	2	531.276052	1060.53755	0.79519	0.00042247	1.1817	0.0006278	1.9769	0.0010503	531.2767904955772	50.18	0.65897	50.627	50.307	50.966	0.44761					32	15	3	0	0	0	0.62081	1	4927	4927		45.952	1.5748	1	1045700	+		8297	22689	5817	5823	9546	9546					0.00970400571168284
EWNKGCLVL	9	Unmodified	_EWNKGCLVL_					0	0	0			REV__ENSG00000184544|ENST00000571134|DHRS7C	REV__ENSG00000184544|ENST00000571134|DHRS7C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2759399414062	2	531.276052	1060.53755	0.7463	0.00039649	1.5221	0.00080864	2.2684	0.0012051	531.2765731147365	49.985	0.90005	50.83	50.395	51.295	0.84501					42	21	3	0	0	0	0.43338	1	4923	4923		55.504	9.532	1	1251300	+		8298	22689	5817	5823	9547	9547					0.00970400571168284
EWPGLLPRLL	10	Unmodified	_EWPGLLPRLL_					0	0	0			REV__ENST00000532982.5_1_11:58938950-58949350:+|nuORF	REV__ENST00000532982.5_1_11:58938950-58949350:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8558959960938	2	597.355691	1192.69683	0.84117	0.00050248	-0.70528	-0.0004213	0.1359	8.1178E-05	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.77314	1	9548	9548		40.778	5.6261	1	18777000	+		8299	24182	5818	5824	9548	9548					0.10818857190793096
EWPVGWQEESY	11	Unmodified	_EWPVGWQEESY_					0	0	0		ENST00000571669.6_1_17:2323092-2323221:-|nuORF	ENST00000571669.6_1_17:2323092-2323221:-|nuORF	ENST00000571669.6_1_17:2323092-2323221:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.5396423339844	3	470.538458	1408.59355	-0.94047	-0.00044253	3.815	0.0017951	2.8745	0.0013526	470.54012642319765	29.259	0.73691	29.23	28.954	29.691	-0.029207					36	16	3	0	0	0	0.77205	1	1833	1833		17.167	0.63689	1	335730			8300	14003	5819	5825	9549	9549					-0.09440719778285711
EWQFAGSYIFR	11	Unmodified	_EWQFAGSYIFR_					0	0	0			REV__ENSG00000164292|ENST00000379982|RHOBTB3	REV__ENSG00000164292|ENST00000379982|RHOBTB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.56500244140625	3	468.562938	1402.66699	0.039541	1.8527E-05	4.0415	0.0018937	4.0811	0.0019122	468.5650240672068	53.71	1.501	54.124	53.581	55.082	0.4139					111	35	6	0	0	0	0.49623	1	5428	5428		52.167	13.453	1	11769000	+		8301	21059	5820	5826	9550	9550					-0.018241265452161315
EWRISSRKTL	10	Unmodified	_EWRISSRKTL_					0	0	0		ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	638.36181640625	2	638.362036	1274.70952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.828	1	57.811	57.311	58.311	-0.01643								0	0	0	0.45132	1	4903	4903		23.523	0.94304	1				8302	1556	5821	5827	9551	9551					0.08315268583032775
EYDGDDEGD	9	Unmodified	_EYDGDDEGD_					0	0	0			REV__ENSG00000043462|ENST00000046794|LCP2	REV__ENSG00000043462|ENST00000046794|LCP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	507.96942138671875	2	507.662166	1013.30978	0.088809	4.5085E-05	-1.9874	-0.0010089	-1.8986	-0.00096386	507.6612010290022	16.719	0.13739	16.778	16.676	16.813	0.059269					8	6	2	0	0	0	0.20789	1	170	170		11.511	4.3177	1	31315	+		8303	16337	5822	5828	9552	9552					-0.19634350613637253
EYDIAKSQ	8	Unmodified	_EYDIAKSQ_					0	0	0			REV__ENSG00000074276|ENST00000261944|CDHR2	REV__ENSG00000074276|ENST00000261944|CDHR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	477.2321472167969	2	477.232364	952.450176	-0.73634	-0.00035141	0.23013	0.00010982	-0.50622	-0.00024158	477.23248209178297	27.715	0.68812	27.691	27.379	28.067	-0.023556					36	16	3	0	0	0	0.41855	1	1288	1288		79.713	5.4575	1	77954	+		8304	16688	5823	5829	9553	9553					-0.027951020987529773
EYDIAKSQ	8	Unmodified	_EYDIAKSQ_					0	0	0			REV__ENSG00000074276|ENST00000261944|CDHR2	REV__ENSG00000074276|ENST00000261944|CDHR2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	477.232364	952.450176	-1.9376	-0.00092469	1.9861	0.00094782	0.048473	2.3133E-05	477.2331259137277	27.689	0.34449	27.689	27.458	27.802	0	0.02192	0.0013691	NaN	79.713	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37631	+		8305	16688	5823	5829							-0.027951020987529773
EYERHRRRRHH	11	Unmodified	_EYERHRRRRHH_					0	0	0			REV__ENSG00000166546|ENST00000536005|BEAN1	REV__ENSG00000166546|ENST00000536005|BEAN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.6219482421875	3	544.621067	1630.84137	-1.3933	-0.00075884	4.3702	0.0023801	2.9769	0.0016213	544.6234364500401	61.892	1.2669	62.281	61.745	63.012	0.38846					77	28	4	0	0	0	0.8498	1	6604	6604		6.001	0.30226	1	1192900	+		8306	21303	5824	5830	9554	9554					0.05118311443334278
EYEVHPLRI	9	Unmodified	_EYEVHPLRI_					0	0	0			REV__ENSG00000198768|ENST00000371149|APCDD1L	REV__ENSG00000198768|ENST00000371149|APCDD1L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3103637695312	2	578.31148	1154.60841	-0.30541	-0.00017662	-1.2607	-0.00072908	-1.5661	-0.0009057	578.3105993918314	110.37	1.6265	110.37	110.02	111.65	0					155	51	5	0	0	0	0.74721	1	11559	11559		37.159	0.71236	1	2787700	+		8307	23378	5825	5831	9555	9555					0.037288168803115695
EYFKKITSPKL	11	Unmodified	_EYFKKITSPKL_					0	0	0			REV__ENSG00000138152|ENST00000260723|BTBD16	REV__ENSG00000138152|ENST00000260723|BTBD16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.93243408203125	3	451.930739	1352.77039	1.2214	0.000552	3.0437	0.0013755	4.2651	0.0019275	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.73277	1	10873	10873		25.892	1.6599	1	1043200	+		8308	19444	5826	5832	9556	9556					0.1081136084260379
EYFSILGP	8	Unmodified	_EYFSILGP_					0	0	0		ENST00000549413.1_1_12:56355068-56359795:-|nuORF	ENST00000549413.1_1_12:56355068-56359795:-|nuORF	ENST00000549413.1_1_12:56355068-56359795:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.2361145019531	2	463.236919	924.459284	1.0527	0.00048763	-0.72739	-0.00033695	0.32528	0.00015068	463.2363409630139	97.762	0.78447	98.147	97.806	98.591	0.38548					41	18	3	0	0	0	0.92973	1	11750	11750		50.025	7.6284	1	301680			8309	13637	5827	5833	9557	9557					-0.005967087424096462
EYFSILGP	8	Unmodified	_EYFSILGP_					0	0	0		ENST00000549413.1_1_12:56355068-56359795:-|nuORF	ENST00000549413.1_1_12:56355068-56359795:-|nuORF	ENST00000549413.1_1_12:56355068-56359795:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	463.236919	924.459284	1.0563	0.0004893	-0.4588	-0.00021253	0.59746	0.00027676	463.23642209538144	97.74	0.74339	98.131	97.887	98.63	0.39065	-0.0083467	0.00015888	NaN	50.025	38	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	363190			8310	13637	5827	5833							-0.005967087424096462
EYGVIPFE	8	Unmodified	_EYGVIPFE_					0	0	0		nc|ENSG00000169826|Q8N6G5-2|CSGALNACT2;ENSG00000169826|ENST00000374466|CSGALNACT2	nc|ENSG00000169826|Q8N6G5-2|CSGALNACT2	nc|ENSG00000169826|Q8N6G5-2|CSGALNACT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	477.2318115234375	2	477.234376	952.454199	0.44791	0.00021376	-4.2768	-0.002041	-3.8289	-0.0018273	477.2322957626423	27.456	0.56436	27.497	27.231	27.795	0.040834					28	18	2	0	0	0	0.91005	1	1238	1238		42.474	0	1	67522			8311	6526	5828	5834	9558	9558					-0.023930126050458966
EYISVQTIS	9	Unmodified	_EYISVQTIS_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.2680053710938	2	520.268947	1038.52334	-0.70558	-0.00036709	0.35941	0.00018699	-0.34617	-0.0001801	520.2689395909086	45.165	0.40523	46.061	45.842	46.247	0.89542					21	9	3	0	0	0	0.41566	1	4205	4205		56.721	5.5284	1	498460	+		8312	23822	5829	5835	9559	9559					0.005620266238793192
EYISVQTIS	9	Unmodified	_EYISVQTIS_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	520.268947	1038.52334	-0.18487	-9.618E-05	-0.16548	-8.6095E-05	-0.35035	-0.00018227	520.2685949700104	45.355	0.36569	45.818	45.635	46	0.46313	-0.1211	-0.00025763	NaN	56.721	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	583350	+		8313	23822	5829	5835							0.005620266238793192
EYISVQTIS	9	Unmodified	_EYISVQTIS_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	520.268947	1038.52334	-0.70558	-0.00036709	0.35941	0.00018699	-0.34617	-0.0001801	520.2689395909086	45.165	0.40523	46.061	45.842	46.247	0.89542	0.1211	0.00028854	NaN	56.721	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	498460	+		8314	23822	5829	5835							0.005620266238793192
EYKKKKKKIYK	11	Unmodified	_EYKKKKKKIYK_					0	0	0			REV__nc|ENSG00000089195|Q9UJA5-2|TRMT6	REV__nc|ENSG00000089195|Q9UJA5-2|TRMT6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	495.6506042480469	3	495.316816	1482.92862	0.076854	3.8067E-05	-2.6718	-0.0013234	-2.5949	-0.0012853	495.3154164908677	15.497	0.18551	15.555	15.469	15.654	0.057872					11	5	3	0	0	0	0.79476	1	47	47		12.433	6.112	1	55972	+		8315	16965	5830	5836	9560	9560					0.2064727982169643
EYKRKVLP	8	Unmodified	_EYKRKVLP_					0	0	0		nc|ENSG00000188732|A4D161-2|FAM221A;ENSG00000188732|ENST00000344962|FAM221A;ENST00000462546.5_1_7:23719819-23732088:+|nuORF	nc|ENSG00000188732|A4D161-2|FAM221A	nc|ENSG00000188732|A4D161-2|FAM221A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.8147583007812	2	516.813659	1031.61277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.002	1	35.983	35.483	36.483	-0.018673								0	0	0	0.31091	1	2275	2275		47.916	1.9636	1				8316	7953	5831	5837	9561	9561					0.09822326093899392
EYLIKPLNK	9	Unmodified	_EYLIKPLNK_					0	0	0		nc|ENSG00000014123|O94874-2|UFL1;ENSG00000014123|ENST00000369278|UFL1	nc|ENSG00000014123|O94874-2|UFL1	nc|ENSG00000014123|O94874-2|UFL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.333740234375	2	559.334424	1116.6543	-0.033266	-1.8607E-05	-0.31895	-0.0001784	-0.35221	-0.00019701	559.3341809592414	63.698	1.6782	64.085	63.314	64.992	0.38681					59	38	2	0	0	0	0.47272	1	6842	6842		53.351	5.3919	1	1917400			8317	813	5832	5838	9562	9562					0.10063462062544204
EYLIKPLNK	9	Unmodified	_EYLIKPLNK_					0	0	0		nc|ENSG00000014123|O94874-2|UFL1;ENSG00000014123|ENST00000369278|UFL1	nc|ENSG00000014123|O94874-2|UFL1	nc|ENSG00000014123|O94874-2|UFL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.3336791992188	2	559.334424	1116.6543	0.24055	0.00013455	-0.55698	-0.00031154	-0.31644	-0.00017699	559.3340611599375	63.586	1.1315	64.14	63.598	64.729	0.5545					46	26	2	0	0	0	0.76764	1	6880	6880		34.173	6.0911	1	1971700			8318	813	5832	5838	9563	9563					0.10063462062544204
EYLTLKTFIA	10	Unmodified	_EYLTLKTFIA_					0	0	0		ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-4|CLCN2;nc|ENSG00000114859|P51788-3|CLCN2;ENSG00000114859|ENST00000265593|CLCN2;nc|ENSG00000114859|P51788-5|CLCN2	ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-5|CLCN2	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.22906494140625	3	400.228785	1197.66453	-0.34643	-0.00013865	4.1673	0.0016679	3.8209	0.0015292	400.2304278989063	42.279	0.60004	42.693	42.427	43.027	0.4139					28	14	3	0	0	0	0.85633	1	3759	3759		21.686	0.65352	1	989290			8319	12563;14856	5833	5839	9564	9564					0.07360024997160508
EYLTLLKKKAF	11	Unmodified	_EYLTLLKKKAF_					0	0	0		ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.94415283203125	3	451.942868	1352.80677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.562	1	54.618	54.118	55.118	0.055614								0	0	0	0.56276	1	4518	4518		14.086	0.57807	1				8320	6887	5834	5840	9565	9565					0.14448237739316028
EYPLDIHIN	9	Unmodified	_EYPLDIHIN_					0	0	0			REV__ENST00000216407.4_1_12:68867655-68868498:+|nuORF	REV__ENST00000216407.4_1_12:68867655-68868498:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.1880493164062	2	557.282389	1112.55022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.375	1	78.375	77.875	78.875	0								0	0	0	0.30053	1	7167	7167		30.504	2.6214	1		+		8321	24131	5835	5841	9566	9566					-0.001548647649542545
EYRYMHVRTC	10	Unmodified	_EYRYMHVRTC_					0	0	0			REV__ENST00000376945.3_2_13:95363334-95363445:-|nuORF	REV__ENST00000376945.3_2_13:95363334-95363445:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.88043212890625	3	453.209513	1356.60671	-0.067956	-3.0798E-05	0.090288	4.0919E-05	0.022332	1.0121E-05	453.20932652289014	19.686	0.61019	19.216	18.974	19.584	-0.46967					21	12	3	0	0	0	0.37624	1	530	530		25.126	9.2053	1	38322	+		8322	25848	5836	5842	9567	9567					-0.057328834715917765
EYRYMHVRTC	10	Unmodified	_EYRYMHVRTC_					0	0	0			REV__ENST00000376945.3_2_13:95363334-95363445:-|nuORF	REV__ENST00000376945.3_2_13:95363334-95363445:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	453.209513	1356.60671	0.10138	4.5948E-05	-0.062178	-2.8179E-05	0.039207	1.7769E-05	453.20936731696554	19.758	0.36827	19.128	18.983	19.351	-0.6296	-0.043814	-9.9055E-05	NaN	25.126	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36875	+		8323	25848	5836	5842							-0.057328834715917765
EYRYTPPF	8	Unmodified	_EYRYTPPF_					0	0	0			REV__nc|ENSG00000165458|O15357-2|INPPL1	REV__nc|ENSG00000165458|O15357-2|INPPL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7595825195312	2	536.758549	1071.50255	0.16624	8.9229E-05	0.0056893	3.0538E-06	0.17193	9.2282E-05	536.7583941729528	76.896	1.0181	77.296	76.784	77.802	0.3997					75	30	3	0	0	0	0.37614	1	8721	8721		88.643	17.347	1	1832400	+		8324	21184	5837	5843	9568	9568					-0.030345189651598048
EYRYTPPF	8	Unmodified	_EYRYTPPF_					0	0	0			REV__nc|ENSG00000165458|O15357-2|INPPL1	REV__nc|ENSG00000165458|O15357-2|INPPL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7578735351562	2	536.758549	1071.50255	-0.49033	-0.00026319	0.69157	0.0003712	0.20124	0.00010801	536.7587435809163	76.742	1.0271	77.31	76.852	77.879	0.56836					69	30	3	0	0	0	0.24705	1	8741	8741		106.42	8.9425	1	1923700	+		8325	21184	5837	5843	9569	9569					-0.030345189651598048
EYSTLFPP	8	Unmodified	_EYSTLFPP_					0	0	0		chr21:18398329-18406066|19|27.74|0.0|21.4|-|0|TE_info:LTR16C,LTR16C_dup6404,ERVL,LTR,donor,-,18406066,18406358|TMPRSS15,None|2	chr21:18398329-18406066|19|27.74|0.0|21.4|-|0|TE_info:LTR16C,LTR16C_dup6404,ERVL,LTR,donor,-,18406066,18406358|TMPRSS15,None|2	chr21:18398329-18406066|19|27.74|0.0|21.4|-|0|TE_info:LTR16C,LTR16C_dup6404,ERVL,LTR,donor,-,18406066,18406358|TMPRSS15,None|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	477.2325134277344	2	477.234376	952.454199	0.44791	0.00021376	-4.2768	-0.002041	-3.8289	-0.0018273	477.2322957626423	27.456	0.56436	27.497	27.231	27.795	0.040834					28	18	2	0	0	0	0.91005	1	1230	1230		42.474	5.446	1	67522			8326	373	5838	5844	9570	9570					-0.023930126050458966
EYTKGKKRWV	10	Unmodified	_EYTKGKKRWV_					0	0	0			REV__ENST00000427157.1_1_6:113948832-113971249:-|nuORF	REV__ENST00000427157.1_1_6:113948832-113971249:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	647.86572265625	2	647.866954	1293.71936	-1.1412	-0.00073931	-1.2636	-0.00081866	-2.4048	-0.001558	647.8658405017543	113.32	2.2055	113.27	113.24	115.45	-0.044777					113	49	3	0	0	0	0.86348	1	12111	12111		31.53	2.3598	1	4362100	+		8327	26554	5839	5845	9571	9571					0.08424456588409157
EYVKQFSI	8	Unmodified	_EYVKQFSI_					0	0	0		ENSG00000115339|ENST00000392701|GALNT3	ENSG00000115339|ENST00000392701|GALNT3	ENSG00000115339|ENST00000392701|GALNT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.267333984375	2	507.26875	1012.52295	-0.00014672	-7.4428E-08	-1.3187	-0.00066896	-1.3189	-0.00066903	507.2686442685549	51.245	1.1988	51.68	51.409	52.607	0.43505					40	28	2	0	0	0	0.92457	1	5102	5102		47.916	5.5195	1	1415200			8328	2834	5840	5846	9572	9572					0.017186516946708252
FAAIHRSKRKV	11	Unmodified	_FAAIHRSKRKV_					0	0	0		ENSG00000135540|ENST00000343505|NHSL1;nc|ENSG00000135540|Q5SYE7|NHSL1	ENSG00000135540|ENST00000343505|NHSL1	ENSG00000135540|ENST00000343505|NHSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2730712890625	3	438.270201	1311.78877	2.0595	0.00090261	4.1762	0.0018303	6.2357	0.0027329	438.2719380139852	107.11	1.2259	107.15	106.67	107.9	0.035614					128	28	5	0	0	0	0.73621	1	11834	11834		25.126	1.7481	1	4659700			8329	4033	5841	5847	9573	9573					0.14534960327819135
FAARSKKPR	9	Unmodified	_FAARSKKPR_					0	0	0			REV__ENSG00000011275|ENST00000389902|RNF216	REV__ENSG00000011275|ENST00000389902|RNF216	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.81689453125	2	530.82235	1059.63015	-0.75356	-0.00040001	-1.8481	-0.00098103	-2.6017	-0.001381	530.8212740930402	89.484	1.7341	89.484	88.958	90.692	0					56	39	2	0	0	0	0.20789	1	8611	8611		39.253	6.4404	1	1182100	+		8330	16182	5842	5848	9574	9574					0.10271666419566827
FAARSKKPR	9	Unmodified	_FAARSKKPR_					0	0	0			REV__ENSG00000011275|ENST00000389902|RNF216	REV__ENSG00000011275|ENST00000389902|RNF216	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8168334960938	2	530.82235	1059.63015	-0.067803	-3.5991E-05	-2.902	-0.0015404	-2.9698	-0.0015764	530.820790426654	86.777	0.94197	86.971	86.55	87.492	0.19379					35	21	2	0	0	0	0.20789	1	8508	8508		32.812	3.6629	1	638220	+		8331	16182	5842	5848	9575	9575					0.10271666419566827
FAARSKKPR	9	Unmodified	_FAARSKKPR_					0	0	0			REV__ENSG00000011275|ENST00000389902|RNF216	REV__ENSG00000011275|ENST00000389902|RNF216	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.816650390625	2	530.82235	1059.63015	0.72515	0.00038492	-3.369	-0.0017883	-2.6439	-0.0014034	530.8204927274867	88.823	1.265	88.974	88.563	89.828	0.15055					44	29	2	0	0	0	0.20789	1	8887	8887		34.173	0	1	1216300	+		8332	16182	5842	5848	9576	9576					0.10271666419566827
FAARSVRG	8	Unmodified	_FAARSVRG_					0	0	0			REV__nc|ENSG00000168958|Q9GZY8|MFF	REV__nc|ENSG00000168958|Q9GZY8|MFF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.2458801269531	2	432.245944	862.477334	2.4229	0.0010473	-0.040852	-1.7658E-05	2.3821	0.0010296	432.2459630773034	97.921	1.1428	97.969	97.579	98.722	0.048157					63	25	4	0	0	0	0.87479	1	10440	10440		30.504	2.2494	1	431540	+		8333	30018	5843	5849	9577	9577					0.040594710229470365
FAARVAVV	8	Unmodified	_FAARVAVV_					0	0	0			REV__ENST00000455981.1_1_9:132044860-132044953:+|nuORF	REV__ENST00000455981.1_1_9:132044860-132044953:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.7549743652344	2	416.755613	831.496673	0.44827	0.00018682	-1.6184	-0.00067446	-1.1701	-0.00048764	416.75482420878427	69.04	0.8387	69.169	68.79	69.629	0.12838					83	36	3	0	0	0	0.86791	1	6218	6218		28.254	8.8943	1	1117600	+		8334	26950	5844	5850	9578	9578					0.07418427313848497
FACALRLGM	9	Unmodified	_FACALRLGM_					0	0	0			REV__ENST00000447767.1_1_20:57098897-57099083:+|nuORF	REV__ENST00000447767.1_1_20:57098897-57099083:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957458496094	2	491.254065	980.493578	0.43453	0.00021347	1.983	0.00097417	2.4176	0.0011876	491.25488900743704	61.005	0.76385	61.124	60.433	61.197	0.11901					62	32	3	0	0	0	0.20789	1	5257	5257		24.203	0	1	325120	+		8335	26827	5845	5851	9579	9579					0.0025509287318072893
FADQEVRSL	9	Unmodified	_FADQEVRSL_					0	0	0		ENSG00000011405|ENST00000691414|PIK3C2A	ENSG00000011405|ENST00000691414|PIK3C2A	ENSG00000011405|ENST00000691414|PIK3C2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.7716064453125	2	532.772188	1063.52982	-0.60654	-0.00032315	-0.35068	-0.00018683	-0.95722	-0.00050998	532.7719066078596	47.302	0.63836	47.773	47.52	48.158	0.47139					29	15	3	0	0	0	0.026876	1	4496	4496		120.31	21.677	1	898100			8336	790	5846	5852	9580	9580					0.0005996457523451681
FADQEVRSL	9	Unmodified	_FADQEVRSL_					0	0	0		ENSG00000011405|ENST00000691414|PIK3C2A	ENSG00000011405|ENST00000691414|PIK3C2A	ENSG00000011405|ENST00000691414|PIK3C2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.7704467773438	2	532.772188	1063.52982	-1.1688	-0.00062271	0.23115	0.00012315	-0.93766	-0.00049956	532.772125876172	47.096	0.45045	48.02	47.827	48.278	0.92315					24	10	3	0	0	0	0.01194	1	4481	4481		131.62	21.496	1	971960			8337	790	5846	5852	9581	9581					0.0005996457523451681
FAEAVEQPTDY	11	Unmodified	_FAEAVEQPTDY_					0	0	0			REV__ENSG00000243649|ENST00000425368|CFB;REV__nc|ENSG00000243649|P00751-2|CFB	REV__nc|ENSG00000243649|P00751-2|CFB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	635.2858276367188	2	635.285325	1268.5561	1.4453	0.0009182	-2.9183	-0.001854	-1.473	-0.00093575	635.2834640915584	69.452	0.29685	69.587	69.382	69.679	0.13521					18	12	2	0	0	0	0.68532	1	6277	6277		33.922	1.1092	1	157690	+		8338	23840;30232	5847	5853	9582	9582					-0.06743811043929782
FAEEFCEQN	9	Unmodified	_FAEEFCEQN_					0	0	0			REV__ENSG00000109805|ENST00000251496|NCAPG	REV__ENSG00000109805|ENST00000251496|NCAPG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.7211303710938	2	558.718764	1115.42298	0.54788	0.00030611	2.5585	0.0014295	3.1064	0.0017356	558.7199434569485	53.325	0.74397	53.739	53.457	54.201	0.4139					41	17	4	0	0	0	0.38563	2	5393	5380;5393		58.782	7.4465	1	946270	+		8339	17775	5848	5854	9583;9584	9584					-0.13011953701447965
FAEEFCEQN	9	Unmodified	_FAEEFCEQN_					0	0	0			REV__ENSG00000109805|ENST00000251496|NCAPG	REV__ENSG00000109805|ENST00000251496|NCAPG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.7210083007812	2	558.718764	1115.42298	-0.22437	-0.00012536	3.1943	0.0017847	2.97	0.0016594	558.7204896054075	53.13	0.66273	53.744	53.49	54.152	0.61436					36	15	4	0	0	0	0.33718	1	5384	5384		62.107	14.192	1	1073900	+		8340	17775	5848	5854	9585	9585					-0.13011953701447965
FAEGFVRAL	9	Unmodified	_FAEGFVRAL_					0	0	0		ENSG00000177606|ENST00000371222|JUN	ENSG00000177606|ENST00000371222|JUN	ENSG00000177606|ENST00000371222|JUN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.2772521972656	2	505.276909	1008.53927	-0.39979	-0.00020201	0.30714	0.00015519	-0.092648	-4.6813E-05	505.2768490224944	64.598	1.0711	64.984	64.607	65.678	0.38614					65	25	4	0	0	0	0.059135	2	6980	6980;6999		104.06	41.949	1	637730			8341	7150	5849	5855	9586;9587	9586					0.03533777651421133
FAEGFVRAL	9	Unmodified	_FAEGFVRAL_					0	0	0		ENSG00000177606|ENST00000371222|JUN	ENSG00000177606|ENST00000371222|JUN	ENSG00000177606|ENST00000371222|JUN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.2763977050781	2	505.276909	1008.53927	0.80354	0.00040601	-0.89319	-0.00045131	-0.089642	-4.5294E-05	505.2763915211898	64.495	0.92579	65.048	64.729	65.654	0.55386					64	22	4	0	0	0	0.051853	4	7004	6982;6993;7004;7016		107.01	42.8	1	652850			8342	7150	5849	5855	9588;9589;9590;9591	9590					0.03533777651421133
FAEVLATA	8	Unmodified	_FAEVLATA_					0	0	0			REV__nc|ENSG00000156194|O14830-2|PPEF2	REV__nc|ENSG00000156194|O14830-2|PPEF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	411.2180480957031	2	411.223811	820.433069	0.61098	0.00025125	-4.4671	-0.001837	-3.8561	-0.0015857	411.22179735882014	87.199	0.77031	87.348	86.784	87.554	0.14956					30	17	3	0	0	0	0.85277	1	8591	8591		25.45	0.94616	1	206290	+		8343	20472	5850	5856	9592	9592					0.015670220860897643
FAFDPSVNY	9	Unmodified	_FAFDPSVNY_					0	0	0		nc|ENSG00000132274|Q8IYM9-2|TRIM22;ENSG00000132274|ENST00000379965|TRIM22	nc|ENSG00000132274|Q8IYM9-2|TRIM22	nc|ENSG00000132274|Q8IYM9-2|TRIM22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2421875	2	530.242732	1058.47091	0.51844	0.0002749	-0.48138	-0.00025525	0.037061	1.9651E-05	530.2423027648284	78.796	1.5294	79.207	78.675	80.205	0.4106					79	35	4	0	0	0	0.01944	3	8998	8988;8998;9008		125.81	60.011	1	2173400			8344	3774	5851	5857	9593;9594;9595	9594					-0.055985117190857636
FAFDPSVNY	9	Unmodified	_FAFDPSVNY_					0	0	0		nc|ENSG00000132274|Q8IYM9-2|TRIM22;ENSG00000132274|ENST00000379965|TRIM22	nc|ENSG00000132274|Q8IYM9-2|TRIM22	nc|ENSG00000132274|Q8IYM9-2|TRIM22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2427978515625	2	530.242732	1058.47091	-0.02389	-1.2668E-05	0.14865	7.8818E-05	0.12476	6.6151E-05	530.2426552402783	78.705	1.2307	79.268	78.868	80.099	0.56332					69	28	4	0	0	0	2.8862E-29	3	9034	9013;9022;9034		191.63	97.619	1	2548400			8345	3774	5851	5857	9596;9597;9598	9598					-0.055985117190857636
FAFEERLF	8	Unmodified	_FAFEERLF_					0	0	0		ENSG00000167701|ENST00000394955|GPT	ENSG00000167701|ENST00000394955|GPT	ENSG00000167701|ENST00000394955|GPT	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	529.7701416015625	2	529.768917	1057.52328	-1.081	-0.0005727	4.4586	0.002362	3.3775	0.0017893	529.7709733456476	67.43	0.68153	67.43	67.161	67.842	0					64	30	3	0	0	0	0.79403	1	5969	5969		63.306	5.495	1	204690			8346	6318	5852	5858	9599	9599					-0.0031792858549124503
FAFEHSEEY	9	Unmodified	_FAFEHSEEY_					0	0	0		ENST00000568870.1_1_16:89958640-89960287:+|nuORF;ENSG00000141002|ENST00000263346|TCF25	ENST00000568870.1_1_16:89958640-89960287:+|nuORF	ENST00000568870.1_1_16:89958640-89960287:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.7435913085938	2	579.740554	1157.46655	-1.2293	-0.0007127	1.7761	0.0010297	0.54676	0.00031698	579.741479718908	52.094	0.77831	52.518	52.234	53.012	0.42348					38	18	3	0	0	0	2.4455E-08	3	5207	5196;5207;5219		157.99	66.245	1	1686800			8347	4474	5853	5859	9600;9601;9602	9601					-0.10588020932664222
FAFEHSEEY	9	Unmodified	_FAFEHSEEY_					0	0	0		ENST00000568870.1_1_16:89958640-89960287:+|nuORF;ENSG00000141002|ENST00000263346|TCF25	ENST00000568870.1_1_16:89958640-89960287:+|nuORF	ENST00000568870.1_1_16:89958640-89960287:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	579.7406616210938	2	579.740554	1157.46655	-0.33493	-0.00019417	0.93059	0.0005395	0.59567	0.00034533	579.7409536864927	51.868	0.56909	52.535	52.271	52.84	0.6673					32	13	3	0	0	0	6.0414E-05	3	5186	5176;5186;5199		148.21	58.104	1	2393300			8348	4474	5853	5859	9603;9604;9605	9604					-0.10588020932664222
FAFVGHHSP	9	Unmodified	_FAFVGHHSP_					0	0	0			REV__nc|ENSG00000100197|P10635-2|CYP2D6	REV__nc|ENSG00000100197|P10635-2|CYP2D6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7474060058594	2	499.745776	997.477	-0.10704	-5.3491E-05	2.0912	0.001045	1.9841	0.00099155	499.74668293371275	68.165	0.87857	68.713	68.072	68.951	0.54819					48	20	3	0	0	0	0.67235	1	7516	7516		42.474	3.6683	1	737660	+		8349	17150	5854	5860	9606	9606					-0.02183948696904281
FAGARVVR	8	Unmodified	_FAGARVVR_					0	0	0		ENSG00000101752|ENST00000261537|MIB1;ENST00000578646.5_1_18:19285077-19371317:+|nuORF	ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.7631530761719	2	438.264136	874.51372	-0.31354	-0.00013741	-0.98618	-0.00043221	-1.2997	-0.00056962	438.2636312151757	45.944	0.55896	45.865	45.418	45.977	-0.079006					23	15	2	0	0	0	0.88915	1	3315	3315		35.201	6.0512	1	83308			8350	1959	5855	5861	9607	9607					0.07144347919654592
FAGGGGPA	8	Unmodified	_FAGGGGPA_					0	0	0		ENST00000249822.8_1_15:52861129-52861270:-|nuORF	ENST00000249822.8_1_15:52861129-52861270:-|nuORF	ENST00000249822.8_1_15:52861129-52861270:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.8091430664062	1	633.299101	632.291825	-0.1538	-9.74E-05	-3.6594	-0.0023175	-3.8132	-0.0024149	633.2967414359904	64.234	3.2468	64.233	62.44	65.687	-0.00078583					193	132	2	0	0	0	0.4196	1	6041	6041		5.0869	0	1	198180			8351	9289	5856	5862	9608	9608					-0.03902931496520523
FAGPVGLR	8	Unmodified	_FAGPVGLR_					0	0	0			REV__ENST00000339526.8_1_1:182360015-182360324:-|nuORF	REV__ENST00000339526.8_1_1:182360015-182360324:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.7392272949219	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.82419	1	2035	2035		13.775	0	1	1364200	+		8352	25233	5857	5863	9609	9609					0.050258542797678274
FAGPVGLR	8	Unmodified	_FAGPVGLR_					0	0	0			REV__ENST00000339526.8_1_1:182360015-182360324:-|nuORF	REV__ENST00000339526.8_1_1:182360015-182360324:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7394104003906	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.83466	1	1998	1998		23.037	1.3344	1	1448600	+		8353	25233	5857	5863	9610	9610					0.050258542797678274
FAGRGLAL	8	Unmodified	_FAGRGLAL_					0	0	0			REV__ENST00000566637.5_1_16:88776385-88780917:+|nuORF	REV__ENST00000566637.5_1_16:88776385-88780917:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.7371826171875	2	402.739963	803.465373	-1.6215	-0.00065305	-1.2612	-0.00050794	-2.8827	-0.001161	402.7393410589606	40.536	0.44481	41.125	40.835	41.28	0.58915					23	12	2	0	0	0	0.81548	1	3489	3489		20.482	2.1574	1	1598500	+		8354	21978	5858	5864	9611	9611					0.05577854279761141
FAGWGRAL	8	Unmodified	_FAGWGRAL_					0	0	0		ENST00000602101.6_1_19:15568751-15575169:-|nuORF;nc|ENSG00000105122|Q86YV0-2|RASAL3;ENSG00000105122|ENST00000343625|RASAL3	ENST00000602101.6_1_19:15568751-15575169:-|nuORF;nc|ENSG00000105122|Q86YV0-2|RASAL3	nc|ENSG00000105122|Q86YV0-2|RASAL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2393493652344	2	439.237587	876.460622	-0.20778	-9.1266E-05	-0.41414	-0.00018191	-0.62193	-0.00027317	439.2369918883033	55.849	0.32622	56.25	56.033	56.359	0.40101					12	7	2	0	0	0	0.92973	1	5748	5748		50.025	11.218	1	435480			8355	2185;14398	5859	5865	9612	9612					0.017449701369855575
FAGWGRAL	8	Unmodified	_FAGWGRAL_					0	0	0		ENST00000602101.6_1_19:15568751-15575169:-|nuORF;nc|ENSG00000105122|Q86YV0-2|RASAL3;ENSG00000105122|ENST00000343625|RASAL3	ENST00000602101.6_1_19:15568751-15575169:-|nuORF;nc|ENSG00000105122|Q86YV0-2|RASAL3	nc|ENSG00000105122|Q86YV0-2|RASAL3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2398376464844	2	439.237587	876.460622	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.713	1	56.272	55.772	56.772	0.55954								0	0	0	0.15464	1	5744	5744		62.978	16.212	1				8356	2185;14398	5859	5865	9613	9613					0.017449701369855575
FAHLNSPQL	9	Unmodified	_FAHLNSPQL_					0	0	0		ENSG00000038358|ENST00000358933|EDC4;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;ENST00000572221.5_1_16:67909733-67911757:+|nuORF	ENSG00000038358|ENST00000358933|EDC4	ENSG00000038358|ENST00000358933|EDC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7711181640625	2	513.771991	1025.52943	0.97398	0.0005004	-1.4811	-0.00076094	-0.50712	-0.00026054	513.7711715159304	51.375	0.66146	52.127	51.818	52.479	0.75174					28	15	2	0	0	0	0.029359	2	5116	5116;5129		118.74	10.656	1	1061600			8357	916	5860	5866	9614;9615	9614					0.017685896460534423
FAHPPGRDY	9	Unmodified	_FAHPPGRDY_					0	0	0			REV__nc|ENSG00000074219|Q15562-3|TEAD2	REV__nc|ENSG00000074219|Q15562-3|TEAD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2543334960938	2	530.253966	1058.49338	-1.0706	-0.00056768	-0.25318	-0.00013425	-1.3238	-0.00070193	530.2536993167932	67.979	0.99502	67.979	67.627	68.622	0					70	39	2	0	0	0	0.69914	1	6053	6053		40.573	0	1	821190	+		8358	16687	5861	5867	9616	9616					-0.03352867530816184
FAHTNVESL	9	Unmodified	_FAHTNVESL_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000434494.5_1_15:44038867-44063413:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3;ENST00000434494.5_1_15:44038867-44063413:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.25177001953125	2	509.253631	1016.49271	-0.84137	-0.00042847	-1.812	-0.00092274	-2.6533	-0.0013512	509.252557341345	43.362	0.84482	43.795	43.46	44.305	0.4334					45	20	4	0	0	0	0.044173	1	3913	3913		110.12	2.0324	1	3334400			8359	6260;11696	5862	5868	9617	9617					-0.014877069705221402
FAIDPHLLL	9	Unmodified	_FAIDPHLLL_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8020629882812	2	519.80276	1037.59097	0.68624	0.00035671	-1.039	-0.00054008	-0.35277	-0.00018337	519.8021603980947	86.778	0.99319	87.225	86.814	87.807	0.44628					76	23	6	0	0	0	0.043636	5	10173	10151;10161;10173;10184;10198		110.34	53.616	1	3094400			8360	3199	5863	5869	9618;9619;9620;9621;9622	9620					0.07367521345327077
FAIDPHLLL	9	Unmodified	_FAIDPHLLL_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8023681640625	2	519.80276	1037.59097	-0.72171	-0.00037515	0.63834	0.00033181	-0.083376	-4.3339E-05	519.8029506877764	86.864	1.4915	87.319	86.937	88.428	0.4543					79	35	4	0	0	0	0.021904	5	10223	10199;10211;10223;10236;10249		123.99	58.038	1	3259600			8361	3199	5863	5869	9623;9624;9625;9626;9627	9625					0.07367521345327077
FAIIVSTT	8	Unmodified	_FAIIVSTT_					0	0	0			REV__ENSG00000257594|ENST00000529983|GALNT4	REV__ENSG00000257594|ENST00000529983|GALNT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2459411621094	2	426.247286	850.48002	-0.1821	-7.7619E-05	-2.626	-0.0011193	-2.8081	-0.0011969	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.82464	1	8849	8849		21.702	2.3424	1	3805200	+		8362	23922	5864	5870	9628	9628					0.04879881637236849
FAIKRIHF	8	Unmodified	_FAIKRIHF_					0	0	0		ENST00000366527.4_3_1:245016579-245016717:-|nuORF	ENST00000366527.4_3_1:245016579-245016717:-|nuORF	ENST00000366527.4_3_1:245016579-245016717:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3142700195312	2	516.311087	1030.60762	1.791	0.00092474	3.8605	0.0019932	5.6516	0.002918	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.82464	1	12206	12206		21.702	4.3374	1	24820000			8363	10508	5865	5871	9629	9629					0.09354067021922674
FAIPGSIFL	9	Unmodified	_FAIPGSIFL_					0	0	0		ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENSG00000166471|ENST00000528080|TMEM41B	ENST00000524543.5_1_11:9304973-9316821:-|nuORF	ENST00000524543.5_1_11:9304973-9316821:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.7790222167969	2	482.778754	963.542954	2.4705	0.0011927	-1.6909	-0.00081631	0.77967	0.00037641	482.7773264874472	102.52	0.50723	102.82	102.47	102.98	0.29865					26	11	4	0	0	0	0.69914	1	12492	12492		40.573	0	1	356860			8364	6200	5866	5872	9630	9630					0.059724474252675464
FAIPGSIFL	9	Unmodified	_FAIPGSIFL_					0	0	0		ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENSG00000166471|ENST00000528080|TMEM41B	ENST00000524543.5_1_11:9304973-9316821:-|nuORF	ENST00000524543.5_1_11:9304973-9316821:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	482.778754	963.542954	2.0045	0.00096774	-2.2032	-0.0010637	-0.19869	-9.5924E-05	482.77759194147353	102.56	0.47186	102.8	102.42	102.89	0.2442	-0.0077577	-5.3555E-05	NaN	40.573	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	319920			8365	6200	5866	5872							0.059724474252675464
FAKAFAKHT	9	Unmodified	_FAKAFAKHT_					0	0	0			REV__ENSG00000183977|ENST00000389050|PP2D1	REV__ENSG00000183977|ENST00000389050|PP2D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.7820129394531	2	510.784902	1019.55525	0.091613	4.6794E-05	-4.1923	-0.0021414	-4.1007	-0.0020946	510.7826138521108	26.501	0.82938	26.469	26.1	26.929	-0.032127					35	17	3	0	0	0	0.76764	1	1169	1169		34.173	0.65696	1	143900	+		8366	22640	5867	5873	9631	9631					0.046254838883101
FAKFGKIVALN	11	Unmodified	_FAKFGKIVALN_					0	0	0		ENSG00000204624|ENST00000294484|DISP3	ENSG00000204624|ENST00000294484|DISP3	ENSG00000204624|ENST00000294484|DISP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3667602539062	2	604.363516	1206.71248	1.0484	0.00063359	3.8594	0.0023325	4.9078	0.0029661	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.68431	1	11396	11396		39.253	6.4404	1	105850000			8367	8470	5868	5874	9632	9632					0.11739143707859512
FAKRGLKI	8	Unmodified	_FAKRGLKI_					0	0	0			REV__nc|ENSG00000135049|Q9UPW5-2|AGTPBP1	REV__nc|ENSG00000135049|Q9UPW5-2|AGTPBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.8060607910156	2	466.805637	931.596721	-0.25933	-0.00012106	1.8679	0.00087195	1.6086	0.00075089	466.80631326130225	31.324	1.1632	31.272	30.944	32.108	-0.051033					55	26	3	0	0	0	0.884	1	1784	1784		33.516	6.7195	1	77668	+		8368	19185	5869	5875	9633	9633					0.12818664647659261
FAKRGYKLPK	10	Unmodified	_FAKRGYKLPK_					0	0	0		ENSG00000136930|ENST00000259457|PSMB7;ENST00000498485.5_1_9:127146904-127177393:-|nuORF;nc|ENSG00000136930|Q99436-2|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3663330078125	2	604.369133	1206.72371	-0.11879	-7.1791E-05	-4.2459	-0.0025661	-4.3646	-0.0026379	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.86763	1	11405	11405		26.693	2.1737	1	64334000			8369	4158	5870	5876	9634	9634					0.12861965801971564
FAKRGYKLPK	10	Unmodified	_FAKRGYKLPK_					0	0	0		ENSG00000136930|ENST00000259457|PSMB7;ENST00000498485.5_1_9:127146904-127177393:-|nuORF;nc|ENSG00000136930|Q99436-2|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.24688720703125	3	403.248514	1206.72371	-1.7912	-0.0007223	-2.2787	-0.00091888	-4.0699	-0.0016412	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.85251	1	11030	11030		19.263	2.0959	1	20673000			8370	4158	5870	5876	9635	9635					0.12861965801971564
FAKRGYKLPK	10	Unmodified	_FAKRGYKLPK_					0	0	0		ENSG00000136930|ENST00000259457|PSMB7;ENST00000498485.5_1_9:127146904-127177393:-|nuORF;nc|ENSG00000136930|Q99436-2|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3660278320312	2	604.369133	1206.72371	-1.2751	-0.0007706	-3.1235	-0.0018878	-4.3986	-0.0026584	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.85251	1	11424	11424		19.997	0.89325	1	103250000			8371	4158	5870	5876	9636	9636					0.12861965801971564
FAKSIKELTI	10	Unmodified	_FAKSIKELTI_					0	0	0			REV__ENSG00000135763|ENST00000258243|URB2	REV__ENSG00000135763|ENST00000258243|URB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.345703125	2	575.347532	1148.68051	0.85707	0.00049311	-4.0816	-0.0023483	-3.2245	-0.0018552	575.345131550994	98.458	2.855	98.614	97.622	100.48	0.15659					162	65	5	0	0	0	0.86621	1	10301	10301		26.063	1.5442	1	2526400	+		8372	19246	5871	5877	9637	9637					0.11211731234061517
FALIFNQGAIW	11	Unmodified	_FALIFNQGAIW_					0	0	0		ENST00000539664.2_1_7:28993099-28993321:-|nuORF	ENST00000539664.2_1_7:28993099-28993321:-|nuORF	ENST00000539664.2_1_7:28993099-28993321:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3453369140625	2	640.345323	1278.67609	0.023117	1.4803E-05	1.8705	0.0011977	1.8936	0.0012125	640.3466349042857	103.14	0.64318	103.14	102.83	103.47	0					62	15	6	0	0	0	0.63176	1	10609	10609		40.778	4.4605	1	12256000			8373	13481	5872	5878	9638	9638					0.04790266811141919
FALIFNQGAIW	11	Unmodified	_FALIFNQGAIW_					0	0	0		ENST00000539664.2_1_7:28993099-28993321:-|nuORF	ENST00000539664.2_1_7:28993099-28993321:-|nuORF	ENST00000539664.2_1_7:28993099-28993321:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3450927734375	2	640.345323	1278.67609	4.5976	0.002944	-2.5187	-0.0016128	2.0789	0.0013312	640.3436898921979	103.43	0.74184	103.69	103.46	104.2	0.26524					50	17	4	0	0	0	0.63176	1	12654	12654		40.778	0.71999	1	7001000			8374	13481	5872	5878	9639	9639					0.04790266811141919
FALKLLMAILY	11	Unmodified	_FALKLLMAILY_					0	0	0			REV__ENSG00000135211|ENST00000257663|TMEM60	REV__ENSG00000135211|ENST00000257663|TMEM60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.391845703125	2	648.393428	1294.7723	-1.1411	-0.00073988	-0.51234	-0.0003322	-1.6534	-0.0010721	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75041	1	12727	12727		21.96	1.1227	1	2297700	+		8375	19199	5873	5879	9640	9640					0.1367069832690504
FALLAQLQILS	11	Unmodified	_FALLAQLQILS_					0	0	0			REV__L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|67|3|sense	REV__L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|67|3|sense	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.248291015625	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.12	1	114.09	113.59	114.59	-0.024452								0	0	0	0.56276	1	12637	12637		17.833	0.6664	1		+		8376	29530	5874	5880	9641	9641					0.12347706642435696
FALLVGTKRKY	11	Unmodified	_FALLVGTKRKY_					0	0	0		nc|ENSG00000155313|Q9UHP3|USP25;nc|ENSG00000155313|Q9UHP3-1|USP25;ENSG00000155313|ENST00000400183|USP25;ENST00000464435.1_1_21:17172090-17177592:+|nuORF	nc|ENSG00000155313|Q9UHP3|USP25	nc|ENSG00000155313|Q9UHP3|USP25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3911743164062	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75041	1	12698	12698		21.96	4.5949	1	2297700			8377	5321	5875	5881	9642	9642					0.14054504144928615
FALNQVKVTG	10	Unmodified	_FALNQVKVTG_					0	0	0			REV__ENSG00000173281|ENST00000310455|PPP1R3B	REV__ENSG00000173281|ENST00000310455|PPP1R3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.8069458007812	2	538.808574	1075.60259	-0.16838	-9.0727E-05	-3.2418	-0.0017467	-3.4102	-0.0018374	538.8067545662908	90.656	4.0484	90.725	89.127	93.176	0.069336					223	95	3	0	0	0	0.86471	2	9276	9276;9337		30.318	1.1682	1	849020	+		8378	21914	5876	5882	9643;9644	9643					0.06781718368665679
FALPAWVPLG	10	Unmodified	_FALPAWVPLG_					0	0	0			REV__ENST00000479915.5_1_7:76129456-76134915:+|nuORF	REV__ENST00000479915.5_1_7:76129456-76134915:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7609252929688	2	535.805303	1069.59605	0.24258	0.00012998	-0.41989	-0.00022498	-0.17731	-9.5003E-05	536.307447516504	50.02	0.16758	50.467	50.389	50.557	0.44761					5	3	2	0	0	0	0.37624	1	4901	4901		12.959	2.6939	1	72498	+		8379	27408	5877	5883	9645	9645					0.0640382520791718
FALSILLLPL	10	Unmodified	_FALSILLLPL_					0	0	0			REV__nc|ENSG00000110218|Q96RD7-2|PANX1	REV__nc|ENSG00000110218|Q96RD7-2|PANX1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.3551635742188	2	550.359911	1098.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.128	1	22.128	21.628	22.628	0								0	0	0	0.45132	1	639	639		17.365	0.89182	1		+		8380	17802	5878	5884	9646	9646					0.15986411107428466
FALSSPFEW	9	Unmodified	_FALSSPFEW_					0	0	0			REV__ENSG00000187775|ENST00000389840|DNAH17;REV__nc|ENSG00000187775|Q9UFH2-4|DNAH17	REV__ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	542.2662963867188	2	542.260925	1082.5073	-0.34569	-0.00018745	-3.606	-0.0019554	-3.9517	-0.0021429	542.2588650096063	58.168	0.59996	58.202	57.951	58.551	0.033905					28	17	2	0	0	0	0.28875	1	5349	5349		65.803	11.081	1	179180	+		8381	22946;29169	5879	5885	9647	9647					-0.030656348223601526
FALSSPFEW	9	Unmodified	_FALSSPFEW_					0	0	0			REV__ENSG00000187775|ENST00000389840|DNAH17;REV__nc|ENSG00000187775|Q9UFH2-4|DNAH17	REV__ENSG00000187775|ENST00000389840|DNAH17	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	542.260925	1082.5073	-1.606	-0.0008709	-11.077	-0.0060065	-12.683	-0.0068774	542.7565001778399	57.504	0.26671	57.898	57.738	58.005	0.39407	-0.26189	-0.0077118	NaN	65.803	12	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84019	+		8382	22946;29169	5879	5885							-0.030656348223601526
FAMILILFQ	9	Unmodified	_FAMILILFQ_					0	0	0		ENST00000505104.5_1_4:9882098-10027590:-|nuORF	ENST00000505104.5_1_4:9882098-10027590:-|nuORF	ENST00000505104.5_1_4:9882098-10027590:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.8224487304688	2	548.317189	1094.61982	-0.48454	-0.00026568	2.3785	0.0013042	1.894	0.0010385	548.3184558335702	109.55	0.33806	109.5	109.37	109.7	-0.049324					28	17	2	0	0	0	0.69914	1	11933	11933		40.573	7.7602	1	1365800			8383	12918	5880	5886	9648	9648					0.07629922650085064
FAMILILFQ	9	Unmodified	_FAMILILFQ_					0	0	0		ENST00000505104.5_1_4:9882098-10027590:-|nuORF	ENST00000505104.5_1_4:9882098-10027590:-|nuORF	ENST00000505104.5_1_4:9882098-10027590:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	548.317189	1094.61982	0.84981	0.00046596	0.56407	0.00030929	1.4139	0.00077526	548.3172956386487	109.46	0.11461	109.54	109.44	109.56	0.078552	0.02533	-0.0017064	NaN	40.573	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	585750			8384	12918	5880	5886							0.07629922650085064
FAMKIKGG	8	Unmodified	_FAMKIKGG_					0	0	0			REV__ENST00000395965.7_2_5:92954874-92955120:-|nuORF	REV__ENST00000395965.7_2_5:92954874-92955120:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.24591064453125	2	426.244024	850.473494	2.6022	0.0011092	2.1484	0.00091576	4.7507	0.0020249	426.2448505635507	87.493	3.3011	87.546	86.187	89.488	0.053024					131	77	2	0	0	0	0.81548	1	8996	8996		20.482	0	1	4266000	+		8385	26130	5881	5887	9649	9649					0.042276652048713004
FANEFAVIKQI	11	Unmodified	_FANEFAVIKQI_					0	0	0			REV__ENSG00000138768|ENST00000514213|USO1	REV__ENSG00000138768|ENST00000514213|USO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3590698242188	2	640.355888	1278.69722	1.6035	0.0010268	3.0485	0.0019521	4.652	0.0029789	640.3577368030512	99.407	2.6879	99.454	98.409	101.1	0.047531					162	62	4	0	0	0	0.70737	1	10638	10638		30.318	2.2362	1	584870	+		8386	19504	5882	5888	9650	9650					0.0690223211997818
FANIDQETY	9	Unmodified	_FANIDQETY_					0	0	0		nc|ENSG00000120899|Q14289-2|PTK2B;ENSG00000120899|ENST00000346049|PTK2B;ENST00000397497.8_2_8:27288464-27288860:+|nuORF	nc|ENSG00000120899|Q14289-2|PTK2B	nc|ENSG00000120899|Q14289-2|PTK2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.7485961914062	2	550.748379	1099.4822	-1.6516	-0.00090959	1.7093	0.0009414	0.057752	3.1807E-05	550.7491829292906	58.492	0.75179	58.884	58.566	59.318	0.39209					39	17	3	0	0	0	0.051853	3	6121	6112;6121;6135		107.01	46.036	1	1076000			8387	3157	5883	5889	9651;9652;9653	9652					-0.06355734415592451
FANIDQETY	9	Unmodified	_FANIDQETY_					0	0	0		nc|ENSG00000120899|Q14289-2|PTK2B;ENSG00000120899|ENST00000346049|PTK2B;ENST00000397497.8_2_8:27288464-27288860:+|nuORF	nc|ENSG00000120899|Q14289-2|PTK2B	nc|ENSG00000120899|Q14289-2|PTK2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.7489013671875	2	550.748379	1099.4822	-0.028469	-1.5679E-05	0.27826	0.00015325	0.24979	0.00013757	550.7485147523782	58.374	0.70275	58.928	58.64	59.343	0.55323					34	16	3	0	0	0	0.017216	3	6132	6121;6132;6144		127.46	58.675	1	1064800			8388	3157	5883	5889	9654;9655;9656	9655					-0.06355734415592451
FAPIWLIA	8	Unmodified	_FAPIWLIA_					0	0	0			REV__ENSG00000177511|ENST00000324000|ST8SIA3	REV__ENSG00000177511|ENST00000324000|ST8SIA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77716064453125	2	465.776014	929.537475	0.5788	0.00026959	2.825	0.0013158	3.4038	0.0015854	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.88393	1	7482	7482		33.493	0	1	344270	+		8389	22214	5884	5890	9657	9657					0.06988768633459586
FAPLLRLSPPP	11	Unmodified	_FAPLLRLSPPP_					0	0	0		ENST00000567228.1_1_16:67229659-67232023:+|nuORF;ENST00000567007.5_1_16:67226831-67232023:+|nuORF;ENSG00000205250|ENST00000379378|E2F4	ENST00000567228.1_1_16:67229659-67232023:+|nuORF	ENST00000567228.1_1_16:67229659-67232023:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3667602539062	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.91	1	118.89	118.39	119.39	-0.024208								0	0	0	0.56276	1	13175	13175		12.207	2.501	1				8390	8518	5885	5891	9658	9658					0.11739143707836774
FAPSPKGMSGP	11	Oxidation (M)	_FAPSPKGM(Oxidation (M))SGP_		FAPSPKGM(1)SGP		FAPSPKGM(58)SGP	0	0	1			REV__ENSG00000005187|ENST00000289416|ACSM3	REV__ENSG00000005187|ENST00000289416|ACSM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.2630004882812	2	546.263142	1090.51173	-1.4106	-0.00077056	1.4629	0.00079912	0.052275	2.8556E-05	546.2637570613591	62.711	1.0832	63.098	62.621	63.704	0.38779					61	24	3	0	0	0	0.41466	1	6743	6743		58.23	12.258	1	791480	+		8391	16078	5886	5892	9659	9659		230			-0.029904936711091068
FAPTFLVYC	9	Unmodified	_FAPTFLVYC_					0	0	0		nc|ENSG00000197658|Q8N4F4-1|SLC22A24;nc|ENSG00000197658|Q8N4F4-3|SLC22A24;ENSG00000197658|ENST00000612278|SLC22A24	nc|ENSG00000197658|Q8N4F4-1|SLC22A24	nc|ENSG00000197658|Q8N4F4-1|SLC22A24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.7633056640625	2	530.762246	1059.50994	-0.034334	-1.8223E-05	2.2288	0.0011829	2.1944	0.0011647	530.7633158062315	84.924	1.0919	84.991	84.549	85.641	0.067177					68	24	4	0	0	0	0.69914	1	8476	8476		40.573	2.7611	1	968200			8392	8188	5887	5893	9660	9660					-0.017435026890780136
FAPVIMAKKTN	11	Oxidation (M)	_FAPVIM(Oxidation (M))AKKTN_		FAPVIM(1)AKKTN		FAPVIM(42)AKKTN	0	0	1			REV__nc|ENSG00000133424|O95461-2|LARGE1	REV__nc|ENSG00000133424|O95461-2|LARGE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.345703125	2	618.344466	1234.67438	2.5351	0.0015676	-0.2636	-0.000163	2.2715	0.0014046	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.61774	1	10505	10505		42.396	7.2441	1	980120	+		8393	19078	5888	5894	9661	9661		280			0.06642889730869683
FAPVITGLQN	10	Unmodified	_FAPVITGLQN_					0	0	0		nc|ENSG00000132849|Q8NI35|PATJ;ENSG00000132849|ENST00000642238|PATJ;ENST00000472512.2_1_1:62586792-62593784:+|nuORF;ENST00000484937.5_1_1:62582831-62626723:+|nuORF	nc|ENSG00000132849|Q8NI35|PATJ	nc|ENSG00000132849|Q8NI35|PATJ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2936401367188	2	530.295299	1058.57605	-0.034361	-1.8221E-05	-3.4792	-0.001845	-3.5136	-0.0018632	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.71042	1	9414	9414		44.117	1.7207	1	1852900			8394	3834	5889	5895	9662	9662					0.049100294773325004
FAPVVPVFILH	11	Unmodified	_FAPVVPVFILH_					0	0	0			REV__ENST00000592782.5_1_17:43185300-43185480:+|nuORF	REV__ENST00000592782.5_1_17:43185300-43185480:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.868896484375	2	619.868434	1237.72232	-0.2143	-0.00013284	1.7129	0.0010618	1.4986	0.00092895	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.69735	1	9395	9395		31.955	3.8734	1	1169100	+		8395	29218	5890	5896	9663	9663					0.11296331713219843
FAPVVPVFILH	11	Unmodified	_FAPVVPVFILH_					0	0	0			REV__ENST00000592782.5_1_17:43185300-43185480:+|nuORF	REV__ENST00000592782.5_1_17:43185300-43185480:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8689575195312	2	619.868434	1237.72232	0.87763	0.00054401	0.75103	0.00046554	1.6287	0.0010095	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.69735	1	9777	9777		31.955	7.4357	1	6574700	+		8396	29218	5890	5896	9664	9664					0.11296331713219843
FAPVVRPQ	8	Unmodified	_FAPVVRPQ_					0	0	0		ENST00000519890.5_1_5:158126121-158500600:-|nuORF;ENST00000519739.5_1_5:158126121-158523319:-|nuORF;ENST00000522192.5_1_5:158126121-158523561:-|nuORF;nc|ENSG00000108001|Q9H4W6-2|EBF3;nc|ENSG00000164330|Q9UH73-2|EBF1;ENST00000518836.5_1_5:158126121-158526593:-|nuORF;ENSG00000164330|ENST00000313708|EBF1;nc|ENSG00000108001|Q9H4W6|EBF3;ENSG00000108001|ENST00000440978|EBF3	ENST00000519890.5_1_5:158126121-158500600:-|nuORF	ENST00000519890.5_1_5:158126121-158500600:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2637023925781	2	457.266345	912.518136	-1.1625	-0.00053158	-3.3651	-0.0015388	-4.5277	-0.0020703	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.86791	1	8197	8197		28.254	0.37203	1	4732500			8397	2386	5891	5897	9665	9665					0.05837812342565485
FARCLGRHFQ	10	Unmodified	_FARCLGRHFQ_					0	0	0			REV__ENSG00000158683|ENST00000289672|PKD1L1	REV__ENSG00000158683|ENST00000289672|PKD1L1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	617.8182983398438	2	617.816741	1233.61893	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.419	1	35.419	34.919	35.919	0								0	0	0	0.45132	1	1977	1977		35.618	0.46626	1		+		8398	20618	5892	5898	9666	9666					0.011465210537608073
FARTEKLTRAS	11	Unmodified	_FARTEKLTRAS_					0	0	0			REV__ENST00000520482.1_1_8:142168222-142185717:+|nuORF	REV__ENST00000520482.1_1_8:142168222-142185717:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3594360351562	2	640.359493	1278.70443	2.419	0.001549	-3.4406	-0.0022032	-1.0216	-0.00065422	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.638	1	10915	10915		40.058	3.7405	1	625580	+		8399	28103	5893	5899	9667	9667					0.07622964720417258
FARVGKGV	8	Unmodified	_FARVGKGV_					0	0	0		ENST00000408011.7_1_18:24129203-24129335:-|nuORF	ENST00000408011.7_1_18:24129203-24129335:-|nuORF	ENST00000408011.7_1_18:24129203-24129335:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2517395019531	2	417.253237	832.491922	-0.20849	-8.6991E-05	-1.1277	-0.00047055	-1.3362	-0.00055755	417.2527156855551	40.298	1.271	40.25	40.046	41.317	-0.04789					89	47	3	0	0	0	0.86791	1	2545	2545		28.254	7.7724	1	609210			8400	11291	5894	5900	9668	9668					0.06897543171101006
FASLGPKVSD	10	Unmodified	_FASLGPKVSD_					0	0	0			REV__ENSG00000187097|ENST00000334696|ENTPD5	REV__ENSG00000187097|ENST00000334696|ENTPD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.7734069824219	2	510.771657	1019.52876	-0.054481	-2.7827E-05	0.37788	0.00019301	0.3234	0.00016518	510.77161955919803	71.85	0.62404	71.887	71.636	72.26	0.037148					45	23	3	0	0	0	0.73395	1	6854	6854		42.864	11.334	1	215000	+		8401	22902	5895	5901	9669	9669					0.019777502063334396
FASRHPVR	8	Unmodified	_FASRHPVR_					0	0	0		ENSG00000164142|ENST00000435205|FHIP1A	ENSG00000164142|ENST00000435205|FHIP1A	ENSG00000164142|ENST00000435205|FHIP1A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.2670593261719	2	485.272493	968.530432	0.98999	0.00048041	-3.5104	-0.0017035	-2.5204	-0.0012231	485.27064316252716	86.188	0.42808	86.114	85.927	86.355	-0.073761					14	9	2	0	0	0	0.4196	1	8868	8868		29.15	13.508	1	37923			8402	5925	5896	5902	9670	9670					0.04490848805608039
FATFKFSVN	9	Unmodified	_FATFKFSVN_					0	0	0		ENST00000464567.1_1_X:100629364-100630272:-|nuORF	ENST00000464567.1_1_X:100629364-100630272:-|nuORF	ENST00000464567.1_1_X:100629364-100630272:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.7781372070312	2	530.776742	1059.53893	-0.3325	-0.00017648	4.4539	0.002364	4.1214	0.0021875	530.7789303124472	57.032	1.1704	57.429	57.029	58.199	0.39672					55	26	3	0	0	0	0.6204	1	5950	5950		45.972	6.7194	1	3032800			8403	12092	5897	5903	9671	9671					0.011543579315912211
FATPSISTL	9	Unmodified	_FATPSISTL_					0	0	0			REV__ENSG00000182704|ENST00000333090|TSKU	REV__ENSG00000182704|ENST00000333090|TSKU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.7532043457031	2	468.755475	935.496398	-0.31111	-0.00014583	-2.2536	-0.0010564	-2.5648	-0.0012022	468.75440753286836	21.774	0.64083	21.709	21.493	22.134	-0.064743					31	20	2	0	0	0	0.78058	1	664	664		30.504	0.6621	1	48957	+		8404	15507	5898	5904	9672	9672					0.026069628033383196
FATQIVKA	8	Unmodified	_FATQIVKA_					0	0	0			REV__nc|ENSG00000087237|P11597-2|CETP	REV__nc|ENSG00000087237|P11597-2|CETP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.26483154296875	2	439.260728	876.506903	2.7297	0.001199	3.6595	0.0016075	6.3892	0.0028065	439.26221620524564	112.19	0.57758	112.17	112.07	112.65	-0.025414					22	12	2	0	0	0	0.87479	1	12403	12403		30.504	0	1	549150	+		8405	16927	5899	5905	9673	9673					0.06370990248433372
FATSSTLL	8	Unmodified	_FATSSTLL_					0	0	0			REV__ENST00000358157.2_1_9:91617434-91617590:+|nuORF	REV__ENST00000358157.2_1_9:91617434-91617590:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.22735595703125	2	420.229094	838.443634	-0.18786	-7.8944E-05	-2.8091	-0.0011805	-2.997	-0.0012594	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.89457	1	7341	7341		37.028	0	1	279000	+		8406	25426	5900	5906	9674	9674					0.01795004740540662
FATTYLCELGF	11	Unmodified	_FATTYLCELGF_					0	0	0		ENSG00000221886|ENST00000408953|FAM200C	ENSG00000221886|ENST00000408953|FAM200C	ENSG00000221886|ENST00000408953|FAM200C	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.7991943359375	2	632.799557	1263.58456	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.656	1	66.656	66.156	67.156	0								0	0	0	0.56276	1	5877	5877		31.53	2.3803	1				8407	8678	5901	5907	9675	9675					-0.03668784668366243
FAVDLEHHSY	10	Unmodified	_FAVDLEHHSY_					0	0	0		nc|ENSG00000171824|Q01780-2|EXOSC10;ENSG00000171824|ENST00000376936|EXOSC10	nc|ENSG00000171824|Q01780-2|EXOSC10	nc|ENSG00000171824|Q01780-2|EXOSC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5244140625	3	406.524372	1216.55129	1.4282	0.00058058	-1.2301	-0.00050007	0.19804	8.0507E-05	406.5237336590279	50.26	0.53567	50.708	50.431	50.966	0.4476					27	12	3	0	0	0	0.63899	1	4941	4941		47.96	1.5027	1	942410			8408	6717	5902	5908	9676	9676					-0.048326503960424816
FAVDLEHHSY	10	Unmodified	_FAVDLEHHSY_					0	0	0		nc|ENSG00000171824|Q01780-2|EXOSC10;ENSG00000171824|ENST00000376936|EXOSC10	nc|ENSG00000171824|Q01780-2|EXOSC10	nc|ENSG00000171824|Q01780-2|EXOSC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.524169921875	3	406.524372	1216.55129	0.67384	0.00027393	-0.073501	-2.988E-05	0.60034	0.00024405	406.5241318306822	50.062	0.41145	50.907	50.683	51.094	0.84501					26	9	4	0	0	0	0.5442	1	4924	4924		53.089	11.662	1	996580			8409	6717	5902	5908	9677	9677					-0.048326503960424816
FAVIVTISLVF	11	Unmodified	_FAVIVTISLVF_					0	0	0			REV__ENSG00000178904|ENST00000392250|DPY19L3	REV__ENSG00000178904|ENST00000392250|DPY19L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8690185546875	2	604.8681	1207.72165	3.1994	0.0019352	-3.0654	-0.0018541	0.134	8.1054E-05	604.8663317043117	116.05	1.2157	116.03	115.77	116.99	-0.02433					49	39	2	0	0	0	0.72228	1	12874	12874		27.882	6.9353	1	83492	+		8410	22299	5903	5909	9678	9678					0.12609492273486467
FAVLFFLWRS	10	Unmodified	_FAVLFFLWRS_					0	0	0		ENST00000557038.5_2_14:39734598-39748673:+|nuORF;ENST00000556990.1_1_14:39736294-39748673:+|nuORF;nc|ENSG00000150527|Q96PC5-6|MIA2;nc|ENSG00000150527|Q96PC5-5|MIA2;nc|ENSG00000150527|Q96PC5-8|MIA2;nc|ENSG00000150527|Q96PC5-10|MIA2;nc|ENSG00000150527|Q96PC5-9|MIA2;nc|ENSG00000150527|Q96PC5-14|MIA2;nc|ENSG00000150527|Q96PC5-7|MIA2;nc|ENSG00000150527|Q96PC5-12|MIA2;ENSG00000150527|ENST00000640607|MIA2	ENST00000557038.5_2_14:39734598-39748673:+|nuORF	ENST00000557038.5_2_14:39734598-39748673:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3682250976562	2	643.358234	1284.70191	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.04	1	114.02	113.52	114.52	-0.024452								0	0	0	0.45132	1	12627	12627		24.519	0.99649	1				8411	5069	5904	5910	9679	9679					0.07095161053393895
FAVPELSSQR	10	Unmodified	_FAVPELSSQR_					0	0	0			REV__ENST00000574849.1_1_16:4407825-4408472:-|nuORF	REV__ENST00000574849.1_1_16:4407825-4408472:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3299560546875	2	567.301113	1132.58767	1.4918	0.00084631	-1.6559	-0.00093938	-0.16406	-9.3072E-05	567.300690965857	92.044	0.1717	92.089	91.983	92.154	0.045448					6	3	2	0	0	0	0.37624	1	9611	9611		14.865	0	1	93147	+		8412	23947	5905	5911	9680	9680					0.026682265006456873
FAVPNPIR	8	Unmodified	_FAVPNPIR_					0	0	0		nc|ENSG00000153234|P43354-2|NR4A2;ENSG00000153234|ENST00000339562|NR4A2	nc|ENSG00000153234|P43354-2|NR4A2	nc|ENSG00000153234|P43354-2|NR4A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2617492675781	2	457.266345	912.518136	-1.2803	-0.00058543	-2.9682	-0.0013572	-4.2485	-0.0019427	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.88915	1	7281	7281		35.201	6.9464	1	812040			8413	5225	5906	5912	9681	9681					0.05837812342554116
FAVSILVERAM	11	Unmodified	_FAVSILVERAM_					0	0	0		nc|ENSG00000168014|Q4AC94-2|C2CD3;nc|ENSG00000168014|Q4AC94-4|C2CD3;nc|ENSG00000168014|Q4AC94-1|C2CD3;nc|ENSG00000168014|Q4AC94-3|C2CD3;ENSG00000168014|ENST00000334126|C2CD3	nc|ENSG00000168014|Q4AC94-2|C2CD3	nc|ENSG00000168014|Q4AC94-2|C2CD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3461303710938	2	618.344466	1234.67438	-0.1645	-0.00010172	2.6153	0.0016171	2.4508	0.0015154	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.73893	1	9806	9806		24.519	0.99649	1	511870			8414	6356	5907	5913	9682	9682					0.06642889730869683
FAYFLFIESD	10	Unmodified	_FAYFLFIESD_					0	0	0		ENST00000469191.1_1_1:38041920-38047841:-|nuORF	ENST00000469191.1_1_1:38041920-38047841:-|nuORF	ENST00000469191.1_1_1:38041920-38047841:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.37939453125	2	626.300247	1250.58594	0.92562	0.00057972	-1.1176	-0.00069995	-0.19198	-0.00012023	626.2985574482561	105.86	0.23244	105.96	105.76	105.99	0.099007					7	5	2	0	0	0	0.37624	1	11308	11308		44.117	16.035	1	98685			8415	12194	5908	5914	9683	9683					-0.029328273079499922
FAYTLISGLN	10	Unmodified	_FAYTLISGLN_					0	0	0			REV__ENSG00000181804|ENST00000316549|SLC9A9	REV__ENSG00000181804|ENST00000316549|SLC9A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.7947998046875	2	549.795132	1097.57571	-0.56805	-0.00031231	0.36613	0.0002013	-0.20192	-0.00011102	549.7950993088224	82.33	0.78506	82.396	82.043	82.828	0.06591					39	17	3	0	0	0	0.8608	1	8139	8139		34.173	0.65696	1	293430	+		8416	22481	5909	5915	9684	9684					0.030826097574845335
FCASAVLD	8	Unmodified	_FCASAVLD_					0	0	0		ENST00000271450.10_1_1:161489050-161489206:+|nuORF	ENST00000271450.10_1_1:161489050-161489206:+|nuORF	ENST00000271450.10_1_1:161489050-161489206:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.1954650878906	2	413.194196	824.37384	0.59533	0.00024599	-2.3485	-0.00097038	-1.7531	-0.00072439	413.1935207770106	85.383	2.6893	85.531	84.474	87.163	0.14857					153	62	4	0	0	0	0.87922	1	8361	8361		31.955	3.7006	1	1731000			8417	9562	5910	5916	9685	9685					-0.0453719719973833
FCASAVLD	8	Unmodified	_FCASAVLD_					0	0	0		ENST00000271450.10_1_1:161489050-161489206:+|nuORF	ENST00000271450.10_1_1:161489050-161489206:+|nuORF	ENST00000271450.10_1_1:161489050-161489206:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1945495605469	2	413.194196	824.37384	-0.094873	-3.9201E-05	-1.7383	-0.00071825	-1.8331	-0.00075745	413.1937900034763	84.315	3.1314	84.763	83.717	86.848	0.44736					207	76	5	0	0	0	0.87922	1	9869	9869		31.955	3.7006	1	10183000			8418	9562	5910	5916	9686	9686					-0.0453719719973833
FCFVFCFF	8	Unmodified	_FCFVFCFF_					0	0	0		chr17:45630606-45636283|34|10.85|0.0|20.05|+|0|TE_info:AluSz6,AluSz6_dup41014,Alu,SINE,donor,-,45630452,45630606|None,LINC02210|1	chr17:45630606-45636283|34|10.85|0.0|20.05|+|0|TE_info:AluSz6,AluSz6_dup41014,Alu,SINE,donor,-,45630452,45630606|None,LINC02210|1	chr17:45630606-45636283|34|10.85|0.0|20.05|+|0|TE_info:AluSz6,AluSz6_dup41014,Alu,SINE,donor,-,45630452,45630606|None,LINC02210|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2302856445312	2	530.226985	1058.43942	0.80248	0.0004255	1.4623	0.00077536	2.2648	0.0012009	530.2276638551339	29.573	1.0489	29.557	29.281	30.33	-0.015167					72	29	4	0	0	0	0.84567	1	1474	1474		24.504	0	1	294480			8419	231	5911	5917	9687	9687					-0.08746499278390729
FCFWPFLS	8	Unmodified	_FCFWPFLS_					0	0	0			REV__ENSG00000167139|ENST00000300504|TBC1D21	REV__ENSG00000167139|ENST00000300504|TBC1D21	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3037109375	2	523.743857	1045.47316	1.6596	0.00086921	0.85973	0.00045028	2.5193	0.0013195	523.7441869235176	91.065	0.49469	91.514	91.219	91.714	0.44958					22	11	2	0	0	0	0.4196	1	10808	10808		37.028	6.5248	1	199560	+		8420	21359	5912	5918	9688	9688					-0.0477575451498069
FCGDFMLSFT	10	Unmodified	_FCGDFMLSFT_					0	0	0			REV__ENSG00000176208|ENST00000321990|ATAD5	REV__ENSG00000176208|ENST00000321990|ATAD5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.2413940429688	2	584.246103	1166.47765	-0.91096	-0.00053223	-2.7888	-0.0016293	-3.6998	-0.0021616	584.2443398968256	59.966	1.1406	60.519	60.119	61.26	0.55323					79	30	3	0	0	0	0.85934	1	6443	6443		35.618	7.736	1	4658100	+		8421	22114	5913	5919	9689	9689					-0.09892658154399214
FCHSEQYSQNT	11	Unmodified	_FCHSEQYSQNT_					0	0	0			REV__ENSG00000151779|ENST00000281513|NBAS;REV__nc|ENSG00000151779|A2RRP1-2|NBAS	REV__nc|ENSG00000151779|A2RRP1-2|NBAS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7390441894531	3	448.515548	1342.52481	-1.3139	-0.00058929	-1.5194	-0.0006815	-2.8333	-0.0012708	448.8494489214863	28.048	0.34201	27.951	27.707	28.049	-0.096947					10	7	2	0	0	0	0.17835	1	1640	1640		8.0344	0.63462	1	33946	+		8422	20268;29931	5914	5920	9690	9690					-0.13274707349683013
FCHSEQYSQNT	11	Unmodified	_FCHSEQYSQNT_					0	0	0			REV__ENSG00000151779|ENST00000281513|NBAS;REV__nc|ENSG00000151779|A2RRP1-2|NBAS	REV__nc|ENSG00000151779|A2RRP1-2|NBAS	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	448.515548	1342.52481	1.1467	0.00051433	-4.0058	-0.0017967	-2.8591	-0.0012823	448.51376129068905	28.086	0.22166	27.831	27.676	27.897	-0.25465	-0.060217	-0.00078899	NaN	8.0344	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25436	+		8423	20268;29931	5914	5920							-0.13274707349683013
FCIMLKKMF	9	Unmodified	_FCIMLKKMF_					0	0	0			REV__ENST00000481528.1_1_1:52926763-52927313:-|nuORF	REV__ENST00000481528.1_1_1:52926763-52927313:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.3321533203125	2	580.805077	1159.5956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.65	1	119.58	119.08	120.08	-0.07531								0	0	0	0.35327	1	12816	12816		13.775	0.81615	1		+		8424	27445	5915	5921	9691	9691					0.022186229005683344
FCIPVGLGEP	10	Unmodified	_FCIPVGLGEP_					0	0	0		nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000083807|ENST00000263093|SLC27A5	nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3140869140625	2	516.265153	1030.51575	-0.047343	-2.4442E-05	3.8723	0.0019991	3.825	0.0019747	516.2672383719716	99.367	0.91099	99.416	99.233	100.14	0.04982					29	21	3	0	0	0	0.37624	1	10521	10521		29.15	0	1	269530			8425	1507	5916	5922	9692	9692					0.0017159582259864692
FCKATCLCDT	10	3 Carbamidomethyl (C)	_FC(Carbamidomethyl (C))KATC(Carbamidomethyl (C))LC(Carbamidomethyl (C))DT_	FC(1)KATC(1)LC(1)DT		FC(57)KATC(57)LC(57)DT		0	3	0		ENSG00000124812|ENST00000335847|CRISP1	ENSG00000124812|ENST00000335847|CRISP1	ENSG00000124812|ENST00000335847|CRISP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	638.2600708007812	2	638.261958	1274.50936	0.99539	0.00063532	-3.5886	-0.0022905	-2.5932	-0.0016551	638.2595210023906	81.641	0.82089	81.699	81.296	82.117	0.057808					46	18	3	0	0	0	0.4892	1	8156	8156		56.721	7.2795	1	589830			8426	3365	5917	5923	9693	9693	41;42;43				-0.11691033462739142
FCLRIKVLTG	10	Unmodified	_FCLRIKVLTG_					0	0	0		nc|ENSG00000163600|Q9Y6W8-2|ICOS;ENSG00000163600|ENST00000316386|ICOS	nc|ENSG00000163600|Q9Y6W8-2|ICOS	nc|ENSG00000163600|Q9Y6W8-2|ICOS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.3447875976562	2	575.344269	1148.67399	-1.3696	-0.00078799	3.6376	0.0020929	2.268	0.0013049	575.3462227460456	98.573	2.415	98.769	98.2	100.61	0.19585					159	55	5	0	0	0	0.86218	1	10264	10264		32.812	0.061884	1	2256700			8427	5831	5918	5924	9694	9694					0.10559514801661862
FCLRIKVLTG	10	Unmodified	_FCLRIKVLTG_					0	0	0		nc|ENSG00000163600|Q9Y6W8-2|ICOS;ENSG00000163600|ENST00000316386|ICOS	nc|ENSG00000163600|Q9Y6W8-2|ICOS	nc|ENSG00000163600|Q9Y6W8-2|ICOS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.3450927734375	2	575.344269	1148.67399	1.1925	0.00068607	1.4962	0.00086081	2.6886	0.0015469	575.3450411705345	98.393	1.0962	98.77	98.327	99.423	0.37678					95	26	5	0	0	0	0.8608	1	11860	11860		34.173	0	1	3337700			8428	5831	5918	5924	9695	9695					0.10559514801661862
FCMCLVADDMM	11	Unmodified	_FCMCLVADDMM_					0	0	0			REV__ENST00000379752.5_1_1:157029186-157029948:-|nuORF	REV__ENST00000379752.5_1_1:157029186-157029948:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.3028564453125	3	426.828036	1277.46228	0.40499	0.00017286	1.5863	0.0006771	1.9913	0.00084996	427.1622179066874	64.277	0.10835	64.401	64.33	64.438	0.12397					5	4	2	0	0	0	0.17294	1	5659	5659		31.634	16.297	1	51744	+		8429	18511	5919	5925	9696	9696					-0.1653535232978811
FCPKCANK	8	Carbamidomethyl (C)	_FCPKC(Carbamidomethyl (C))ANK_	FC(0.001)PKC(0.999)ANK		FC(-30)PKC(30)ANK		0	1	0		ENSG00000165632|ENST00000344293|TAF3	ENSG00000165632|ENST00000344293|TAF3	ENSG00000165632|ENST00000344293|TAF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2265319824219	2	484.228048	966.441542	-0.10369	-5.021E-05	-0.67628	-0.00032748	-0.77997	-0.00037769	484.2274554748165	32.024	0.77343	32.15	31.86	32.634	0.12643					33	17	3	0	0	0	0.91005	1	2231	2231		42.474	7.2737	2	264850			8430	6103	5920	5926	9697	9697	75				-0.043020705405865556
FCPVPLRPS	9	Unmodified	_FCPVPLRPS_					0	0	0		ENST00000593069.1_2_19:56160288-56160417:+|nuORF	ENST00000593069.1_2_19:56160288-56160417:+|nuORF	ENST00000593069.1_2_19:56160288-56160417:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2744445800781	2	508.273312	1014.53207	1.283	0.00065209	1.3198	0.00067084	2.6028	0.0013229	508.7755670844352	31.83	0.59983	31.937	31.675	32.274	0.10707					28	13	3	0	0	0	0.78536	1	2212	2212		29.15	4.6304	1	252220			8431	14303	5921	5927	9698	9698					0.025387217793536365
FCSAFKASY	9	Unmodified	_FCSAFKASY_					0	0	0			REV__ENSG00000148218|ENST00000409155|ALAD	REV__ENSG00000148218|ENST00000409155|ALAD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2344970703125	2	512.233853	1022.45315	-0.047414	-2.4287E-05	2.236	0.0011453	2.1885	0.001121	512.2348746592111	58.375	1.001	58.361	57.946	58.947	-0.013641					89	34	4	0	0	0	0.64922	1	5297	5297		44.117	1.6423	1	1104700	+		8432	20102	5922	5928	9699	9699					-0.05717550245606162
FCSFALAEDD	10	Unmodified	_FCSFALAEDD_					0	0	0			REV__ENST00000473458.5_1_22:25240737-25320238:+|nuORF	REV__ENST00000473458.5_1_22:25240737-25320238:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	558.3237915039062	2	559.228965	1116.44338	0.30159	0.00016866	2.9907	0.0016725	3.2923	0.0018412	559.2304400702516	59.47	0.471	59.564	59.359	59.83	0.094063					17	11	2	0	0	0	0.37624	1	5129	5129		20.947	0	1	80027	+		8433	21348	5923	5929	9700	9700					-0.11018783041663482
FCSQPRGAP	9	Carbamidomethyl (C)	_FC(Carbamidomethyl (C))SQPRGAP_	FC(1)SQPRGAP		FC(46)SQPRGAP		0	1	0			REV__ENST00000433510.2_1_17:46713761-46713989:-|nuORF	REV__ENST00000433510.2_1_17:46713761-46713989:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.23931884765625	2	510.240001	1018.46545	0.02879	1.469E-05	-0.11047	-5.6367E-05	-0.081681	-4.1677E-05	510.2397797540504	36.463	0.98129	36.445	36.151	37.132	-0.018673					41	21	3	0	0	0	0.62081	1	2370	2370		45.952	7.1458	1	201220	+		8434	26651	5924	5930	9701	9701	327				-0.04304513782551567
FCTTYDETSL	10	Unmodified	_FCTTYDETSL_					0	0	0			REV__ENST00000399586.2_1_X:74960734-74966719:-|nuORF;REV__nc|ENSG00000182670|P53804-3|TTC3	REV__nc|ENSG00000182670|P53804-3|TTC3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8662719726562	2	590.247354	1178.48016	0.89092	0.00052586	3.9124	0.0023093	4.8034	0.0028352	590.2480897187952	103.36	0.18906	103.48	103.4	103.59	0.12621					7	4	3	0	0	0	0.37624	1	10919	10919		26.693	2.1737	1	80525	+		8435	26231;22541	5925	5931	9702	9702					-0.1019453121573406
FCVAIFIFL	9	Unmodified	_FCVAIFIFL_					0	0	0		ENSG00000006118|ENST00000453848|TMEM132A;nc|ENSG00000006118|Q24JP5-2|TMEM132A;ENST00000540112.1_3_11:60703176-60704376:+|nuORF;nc|ENSG00000006118|Q24JP5-4|TMEM132A	ENSG00000006118|ENST00000453848|TMEM132A	ENSG00000006118|ENST00000453848|TMEM132A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	536.7994995117188	2	536.798632	1071.58271	-1.149	-0.00061681	4.1417	0.0022233	2.9926	0.0016064	536.8003954617878	60.235	0.43344	60.235	60.033	60.467	0					34	16	3	0	0	0	0.78292	1	5271	5271		29.842	3.1486	1	98662			8436	694	5926	5932	9703	9703					0.04978251104330411
FCVGTGEL	8	Unmodified	_FCVGTGEL_					0	0	0			REV__ENSG00000161010|ENST00000292586|MRNIP	REV__ENSG00000161010|ENST00000292586|MRNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1938781738281	2	413.194196	824.37384	0.071072	2.9367E-05	-2.539	-0.0010491	-2.4679	-0.0010197	413.19345857081765	82.462	1.3534	82.936	82.432	83.785	0.47383					89	32	5	0	0	0	0.82464	1	9548	9548		21.702	0	1	2653900	+		8437	20757	5927	5933	9704	9704					-0.0453719719973833
FCWLTSLLK	9	Unmodified	_FCWLTSLLK_					0	0	0		ENST00000380249.5_1_9:20789503-20789587:+|nuORF	ENST00000380249.5_1_9:20789503-20789587:+|nuORF	ENST00000380249.5_1_9:20789503-20789587:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.8056640625	2	555.804445	1109.59434	0.48387	0.00026894	3.0842	0.0017142	3.5681	0.0019832	555.8060936084939	59.421	0.71672	59.535	59.153	59.87	0.11396					34	20	2	0	0	0	0.25483	1	5087	5087		68.787	15.435	1	296800			8438	10915	5928	5934	9705	9705					0.04392448127669013
FCYWSLGWVV	10	Unmodified	_FCYWSLGWVV_					0	0	0		ENST00000356978.8_1_14:90872972-90873068:+|nuORF	ENST00000356978.8_1_14:90872972-90873068:+|nuORF	ENST00000356978.8_1_14:90872972-90873068:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	630.296630859375	2	630.299527	1258.5845	-0.23568	-0.00014855	-4.0565	-0.0025568	-4.2922	-0.0027054	630.2969318273362	23.876	1.3048	23.827	23.49	24.795	-0.049152					78	30	4	0	0	0	0.86589	1	901	901		29.15	4.6304	1	407500			8439	10377	5929	5935	9706	9706					-0.03444739877727443
FCYWSLGWVV	10	Unmodified	_FCYWSLGWVV_					0	0	0		ENST00000356978.8_1_14:90872972-90873068:+|nuORF	ENST00000356978.8_1_14:90872972-90873068:+|nuORF	ENST00000356978.8_1_14:90872972-90873068:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	630.2960205078125	2	630.299527	1258.5845	0.23279	0.00014672	-4.2793	-0.0026972	-4.0465	-0.0025505	630.2969971342915	23.435	0.67488	23.529	23.3	23.975	0.094501					57	30	3	0	0	0	0.85934	1	755	755		35.618	0.46626	1	215320			8440	10377	5929	5935	9707	9707					-0.03444739877727443
FDAQRLTSLVG	11	Unmodified	_FDAQRLTSLVG_					0	0	0			REV__ENSG00000163655|ENST00000496455|GMPS	REV__ENSG00000163655|ENST00000496455|GMPS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	603.823974609375	2	603.827495	1205.64044	-0.59862	-0.00036146	-1.0573	-0.00063845	-1.656	-0.00099991	603.8268481283726	43.91	0.48102	43.877	43.623	44.104	-0.03347					20	11	2	0	0	0	0.68532	1	3474	3474		33.922	2.3918	1	128450	+		8441	20954	5930	5936	9708	9708					0.04584184563464078
FDCRHVPD	8	Unmodified	_FDCRHVPD_					0	0	0			REV__chr19:23401047-23403206|29|10.76|0.57|4.24|-|1|LINC01224,LINC01224|2	REV__chr19:23401047-23403206|29|10.76|0.57|4.24|-|1|LINC01224,LINC01224|2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7215881347656	2	494.718901	987.42325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.309	1	34.304	33.804	34.804	-0.0047417								0	0	0	0.29353	1	2054	2054		28.254	0.37203	1		+		8442	15694	5931	5937	9709	9709					-0.07096489190939792
FDDEYDMPPE	10	Unmodified	_FDDEYDMPPE_					0	0	0			REV__nc|ENSG00000108389|Q9NYA4|MTMR4	REV__nc|ENSG00000108389|Q9NYA4|MTMR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	629.2354736328125	2	629.234444	1256.45433	0.088896	5.5936E-05	-2.499	-0.0015724	-2.4101	-0.0015165	629.2327803799166	52.674	0.59188	52.691	52.488	53.08	0.017487					22	14	3	0	0	0	0.85694	1	4600	4600		21.96	1.9631	1	136590	+		8443	17707	5932	5938	9710	9710					-0.16363425458052916
FDDILKHLLT	10	Unmodified	_FDDILKHLLT_					0	0	0		ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5647888183594	3	405.564168	1213.67067	-0.18878	-7.6562E-05	1.7449	0.00070767	1.5561	0.00063111	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.85694	1	5897	5897		20.837	6.1435	1	257140			8444	6887	5933	5939	9711	9711					0.0723854322866373
FDDLTWTFT	9	Unmodified	_FDDLTWTFT_					0	0	0			REV__ENSG00000184144|ENST00000331830|CNTN2	REV__ENSG00000184144|ENST00000331830|CNTN2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.262939453125	2	573.261122	1144.50769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.798	1	36.809	36.309	37.309	0.011173								0	0	0	0.24168	1	2410	2410		65.803	5.6849	1		+		8445	22646	5934	5940	9712	9712					-0.058782598932111796
FDDMRSVRLQ	10	Unmodified	_FDDMRSVRLQ_					0	0	0			REV__ENSG00000149577|ENST00000324225|SIDT2	REV__ENSG00000149577|ENST00000324225|SIDT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.8152465820312	2	633.816604	1265.61866	0.70688	0.00044804	-3.2876	-0.0020838	-2.5808	-0.0016357	633.8144115659621	75.62	0.84026	75.753	75.398	76.239	0.13326					67	23	4	0	0	0	0.36572	1	7039	7039		64.207	0	1	311410	+		8446	20181	5935	5941	9713	9713					-0.0035294345673264615
FDGDCYIIL	9	Unmodified	_FDGDCYIIL_					0	0	0		nc|ENSG00000127831|P09327-2|VIL1;ENSG00000127831|ENST00000248444|VIL1	nc|ENSG00000127831|P09327-2|VIL1	nc|ENSG00000127831|P09327-2|VIL1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.746337890625	2	529.746793	1057.47903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.075	1	68.459	67.959	68.959	0.38482								0	0	0	0.30053	1	7470	7470		30.504	1.3541	1				8447	3516	5936	5942	9714	9714					-0.047407007939682444
FDGIRTCDEY	10	Unmodified	_FDGIRTCDEY_					0	0	0		ENSG00000113946|ENST00000264734|CLDN16	ENSG00000113946|ENST00000264734|CLDN16	ENSG00000113946|ENST00000264734|CLDN16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	609.7578735351562	2	609.75842	1217.50229	-0.11336	-6.912E-05	-2.296	-0.0014	-2.4094	-0.0014692	609.7569821321349	55.248	0.61305	55.221	54.946	55.559	-0.026848					25	14	3	0	0	0	0.40664	1	5022	5022		63.534	7.1001	1	191860			8448	2754	5937	5943	9715	9715					-0.09776306747312447
FDGIRTCDEY	10	Unmodified	_FDGIRTCDEY_					0	0	0		ENSG00000113946|ENST00000264734|CLDN16	ENSG00000113946|ENST00000264734|CLDN16	ENSG00000113946|ENST00000264734|CLDN16	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	609.75842	1217.50229	-0.37818	-0.0002306	-1.7392	-0.0010605	-2.1174	-0.0012911	609.7572022370538	55.222	0.55523	55.215	54.942	55.497	-0.0077095	-0.020894	0.00030116	NaN	63.534	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149960			8449	2754	5937	5943							-0.09776306747312447
FDGIRTCDEY	10	Unmodified	_FDGIRTCDEY_					0	0	0		ENSG00000113946|ENST00000264734|CLDN16	ENSG00000113946|ENST00000264734|CLDN16	ENSG00000113946|ENST00000264734|CLDN16	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	609.75842	1217.50229	1.0422	0.0006355	-3.1682	-0.0019318	-2.1259	-0.0012963	609.7568666371812	55.231	0.509	55.295	55.127	55.636	0.063721	0.059434	-0.0014415	NaN	63.534	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	117320			8450	2754	5937	5943							-0.09776306747312447
FDGIRTCDEY	10	Unmodified	_FDGIRTCDEY_					0	0	0		ENSG00000113946|ENST00000264734|CLDN16	ENSG00000113946|ENST00000264734|CLDN16	ENSG00000113946|ENST00000264734|CLDN16	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	609.75842	1217.50229	-0.091733	-5.5935E-05	-2.111	-0.0012872	-2.2027	-0.0013431	609.7572673359062	55.213	0.41815	55.176	54.918	55.336	-0.036827	-0.05964	-0.0001522	NaN	63.534	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124950			8451	2754	5937	5943							-0.09776306747312447
FDGKKIKKMI	10	Unmodified	_FDGKKIKKMI_					0	0	0			REV__ENSG00000100784|ENST00000614987|RPS6KA5	REV__ENSG00000100784|ENST00000614987|RPS6KA5	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.7319946289062	2	604.365201	1206.71585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.41	1	112.38	111.88	112.88	-0.032333								0	0	0	0.45132	1	11987	11987		6.3127	2.6283	1		+		8452	17219	5938	5944	9716	9716					0.12076070490184065
FDHFSAGE	8	Unmodified	_FDHFSAGE_					0	0	0		ENSG00000152749|ENST00000376958|GPR180	ENSG00000152749|ENST00000376958|GPR180	ENSG00000152749|ENST00000376958|GPR180	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.1875	2	455.1905	908.366446	-0.32073	-0.00014599	-3.9399	-0.0017934	-4.2606	-0.0019394	455.1885863451267	25.185	1.5803	25.144	24.803	26.383	-0.041168					52	39	3	0	0	0	0.87479	1	1054	1054		30.504	0.6621	1	75484			8453	5196	5939	5945	9717	9717					-0.09140213475802739
FDHQMVLCKKD	11	Unmodified	_FDHQMVLCKKD_					0	0	0		nc|ENSG00000131089|O43307-3|ARHGEF9;nc|ENSG00000131089|O43307-2|ARHGEF9;nc|ENSG00000131089|O43307|ARHGEF9;ENSG00000131089|ENST00000671741|ARHGEF9	nc|ENSG00000131089|O43307-3|ARHGEF9	nc|ENSG00000131089|O43307-3|ARHGEF9	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.222412109375	3	455.221419	1362.64243	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.322	1	17.845	17.345	18.345	-0.47694								0	0	0	0.56276	1	373	373		29.551	4.4248	1				8454	3714	5940	5946	9718	9718					-0.024388460145928548
FDKEEHIK	8	Unmodified	_FDKEEHIK_					0	0	0			REV__nc|ENSG00000137757|P51878-3|CASP5	REV__nc|ENSG00000137757|P51878-3|CASP5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3033447265625	2	523.269281	1044.52401	1.1119	0.00058185	0.40672	0.00021282	1.5187	0.00079467	523.2697927392368	87.861	0.26202	87.915	87.772	88.034	0.053032					7	5	2	0	0	0	0.4196	1	9011	9011		18.324	0	1	19083	+		8455	19404	5941	5947	9719	9719					0.003528660635538472
FDKEFVKKRL	10	Unmodified	_FDKEFVKKRL_					0	0	0			REV__ENSG00000213339|ENST00000250237|QTRT1	REV__ENSG00000213339|ENST00000250237|QTRT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2569885253906	3	437.259079	1308.75541	-1.4909	-0.0006519	-2.4521	-0.0010722	-3.943	-0.0017241	437.257922541183	97.247	2.1693	97.478	96.225	98.394	0.23103					136	50	3	0	0	0	0.86621	1	10117	10117		26.063	4.283	1	478050	+		8456	23613	5942	5948	9720	9720					0.11337913765282792
FDKRRKEFAVL	11	Unmodified	_FDKRRKEFAVL_					0	0	0		ENSG00000237441|ENST00000497454|RGL2;ENST00000483151.5_1_6:33261379-33266279:-|nuORF	ENSG00000237441|ENST00000497454|RGL2	ENSG00000237441|ENST00000497454|RGL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.274658203125	3	470.273499	1407.79867	0.42229	0.00019859	1.4335	0.00067414	1.8558	0.00087273	470.27429419991336	61.919	1.0479	62.04	61.502	62.55	0.1209					64	49	2	0	0	0	0.73621	1	5413	5413		25.126	2.5644	1	1476600			8457	8759	5943	5949	9721	9721					0.11108103542574099
FDLKLVWVD	9	Unmodified	_FDLKLVWVD_					0	0	0		ENST00000450172.5_2_3:46722734-46730936:-|nuORF;ENST00000431015.5_2_3:46722577-46730936:-|nuORF;nc|ENSG00000178038|Q60I27-2|ALS2CL;ENSG00000178038|ENST00000318962|ALS2CL	ENST00000450172.5_2_3:46722734-46730936:-|nuORF	ENST00000450172.5_2_3:46722734-46730936:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3300170898438	2	567.813325	1133.6121	0.7897	0.0004484	3.5518	0.0020168	4.3415	0.0024652	567.815441535396	92.018	0.17072	92.174	92.025	92.196	0.15614					5	3	2	0	0	0	0.20789	1	9295	9295		23.042	10.083	1	48771			8458	7179	5944	5950	9722	9722					0.050634866541713563
FDLSHGSAQ	9	Unmodified	_FDLSHGSAQ_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2276306152344	2	481.222331	960.430109	-3.0189	-0.0014528	3.6194	0.0017417	0.60053	0.00028899	481.2239030858985	38.532	0.44539	38.543	38.317	38.762	0.011173					20	9	3	0	0	0	0.35373	1	2655	2655		60.972	13.315	1	100320		+	8459	7934;579	5945	5951	9723	9723					-0.05168853038708221
FDMAKVKPLSK	11	Oxidation (M)	_FDM(Oxidation (M))AKVKPLSK_		FDM(1)AKVKPLSK		FDM(58)AKVKPLSK	0	0	1			REV__ENSG00000109016|ENST00000395511|DHRS7B	REV__ENSG00000109016|ENST00000395511|DHRS7B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3602294921875	2	640.357573	1278.70059	0.92817	0.00059436	1.0646	0.00068171	1.9928	0.0012761	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.41466	1	10445	10445		58.23	25.418	1	603720	+		8460	17742	5946	5952	9724	9724		256			0.07239158902325471
FDMIFHVYKRK	11	Unmodified	_FDMIFHVYKRK_					0	0	0			REV__ENST00000293618.12_1_12:50869692-50869887:+|nuORF	REV__ENST00000293618.12_1_12:50869692-50869887:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2669982910156	3	495.267468	1482.78058	0.0094366	4.6736E-06	1.7409	0.00086221	1.7503	0.00086688	495.2681394302805	16.042	0.30346	15.555	15.436	15.739	-0.48718					14	6	3	0	0	0	0.74405	1	82	82		23.378	9.87	1	109980	+		8461	24687	5947	5953	9725	9725					0.058496452961662726
FDMIFHVYKRK	11	Unmodified	_FDMIFHVYKRK_					0	0	0			REV__ENST00000293618.12_1_12:50869692-50869887:+|nuORF	REV__ENST00000293618.12_1_12:50869692-50869887:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	495.267468	1482.78058	0.0094366	4.6736E-06	1.7409	0.00086221	1.7503	0.00086688	495.2681394302805	16.042	0.30346	15.555	15.436	15.739	-0.48718	0.048062	-0.0001219	NaN	23.378	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109980	+		8462	24687	5947	5953							0.058496452961662726
FDNDRADQ	8	Unmodified	_FDNDRADQ_					0	0	0		ENSG00000146250|ENST00000369700|PRSS35	ENSG00000146250|ENST00000369700|PRSS35	ENSG00000146250|ENST00000369700|PRSS35	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.70721435546875	2	490.707045	979.399537	-0.22595	-0.00011087	0.634	0.00031111	0.40806	0.00020024	490.70696263856706	28.177	0.65317	28.137	27.878	28.532	-0.039907					21	14	2	0	0	0	0.89043	1	1405	1405		35.618	3.6634	1	76656			8463	4830	5948	5954	9726	9726					-0.09098631423762527
FDNRPYIF	8	Unmodified	_FDNRPYIF_					0	0	0		CON__Q2TBQ1	CON__Q2TBQ1	CON__Q2TBQ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.2665405273438	2	536.266542	1070.51853	0.40026	0.00021465	-0.33064	-0.00017731	0.069621	3.7335E-05	536.2660380870366	54.465	0.5871	54.871	54.573	55.16	0.40663					32	13	3	0	0	0	0.60155	1	5550	5550		71.378	2.5911	1	562480		+	8464	615	5949	5955	9727	9727					-0.013908127282547866
FDPASAVVKL	10	Unmodified	_FDPASAVVKL_					0	0	0			REV__ENSG00000113805|ENST00000263665|CNTN3	REV__ENSG00000113805|ENST00000263665|CNTN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7996826171875	2	523.797675	1045.5808	0.97169	0.00050897	-1.5248	-0.00079866	-0.55307	-0.00028969	523.7967666543079	54.527	1.0907	54.933	54.361	55.452	0.40663					48	25	4	0	0	0	0.3985	1	5567	5567		64.207	0	1	3204000	+		8465	18015	5950	5956	9728	9728					0.059829136200733046
FDPELPSCRLN	11	Unmodified	_FDPELPSCRLN_					0	0	0			REV__nc|ENSG00000288701|Q5JSZ5|PRRC2B	REV__nc|ENSG00000288701|Q5JSZ5|PRRC2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	645.811279296875	2	645.810987	1289.60742	0.26866	0.00017351	1.764	0.0011392	2.0326	0.0013127	645.8120329082528	25.775	0.39312	25.881	25.694	26.087	0.1054					42	18	3	0	0	0	0.66929	1	967	967		36.447	2.5251	1	191640	+		8466	30290	5951	5957	9729	9729					-0.025797655508768003
FDPYIYINPK	10	Unmodified	_FDPYIYINPK_					0	0	0			REV__ENSG00000138483|ENST00000261058|CCDC54	REV__ENSG00000138483|ENST00000261058|CCDC54	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.3054504394531	3	423.888651	1268.64412	0.88198	0.00037386	3.2989	0.0013984	4.1809	0.0017722	423.8899786592243	34.997	1.0726	35.245	34.519	35.592	0.2477					46	26	2	0	0	0	0.37624	1	2578	2578		15.333	0	1	279020	+		8467	19478	5952	5958	9730	9730					0.020548543373024586
FDQLRGPK	8	Unmodified	_FDQLRGPK_					0	0	0			REV__ENST00000609477.5_1_6:125555503-125614049:-|nuORF	REV__ENST00000609477.5_1_6:125555503-125614049:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.7671203613281	2	480.766709	959.518865	0.69981	0.00033645	-0.35838	-0.0001723	0.34143	0.00016415	480.766416926079	35.236	0.8751	35.617	35.288	36.163	0.3812					50	22	3	0	0	0	0.37302	1	2681	2681		87.754	2.5935	1	2079200	+		8468	17905	5953	5959	9731	9731					0.03748606991621273
FDRRIPTRQSN	11	Unmodified	_FDRRIPTRQSN_					0	0	0			REV__ENSG00000117724|ENST00000366955|CENPF	REV__ENSG00000117724|ENST00000366955|CENPF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.9320373535156	3	463.916375	1388.72729	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.848	1	33.802	33.302	34.302	-0.045815								0	0	0	0.56276	1	1674	1674		25.892	6.629	1		+		8469	18280	5954	5960	9732	9732					0.048479838378852946
FDSEISEDA	9	Unmodified	_FDSEISEDA_					0	0	0		ENST00000407170.6_1_19:42071403-42085771:+|nuORF;nc|ENSG00000007129|Q3KPI0-3|CEACAM21	ENST00000407170.6_1_19:42071403-42085771:+|nuORF	ENST00000407170.6_1_19:42071403-42085771:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8000183105469	2	506.708919	1011.40329	-0.76834	-0.00038932	0.12464	6.3155E-05	-0.6437	-0.00032617	506.70887095920625	45.156	0.52253	45.125	44.929	45.451	-0.031067					19	11	2	0	0	0	0.20789	1	3673	3673		30.504	17.544	1	168460			8470	11283	5955	5961	9733	9733					-0.10196006440571637
FDSGSKFLAS	10	Unmodified	_FDSGSKFLAS_					0	0	0			REV__ENST00000468830.1_1_7:131163282-131172484:+|nuORF	REV__ENST00000468830.1_1_7:131163282-131172484:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.3123779296875	2	529.761289	1057.50803	1.7649	0.00093495	2.7616	0.001463	4.5265	0.002398	529.7624369901806	92.008	0.68152	92.455	92.137	92.819	0.44661					23	15	2	0	0	0	0.37624	1	10887	10887		34.173	5.9183	1	137690	+		8471	18781	5956	5962	9734	9734					-0.018428401733444844
FDSGSKFLAS	10	Unmodified	_FDSGSKFLAS_					0	0	0			REV__ENST00000468830.1_1_7:131163282-131172484:+|nuORF	REV__ENST00000468830.1_1_7:131163282-131172484:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	529.761289	1057.50803	-0.66319	-0.00035133	4.8553	0.0025721	4.1921	0.0022208	529.7637002282695	92.089	0.68217	92.551	92.235	92.917	0.46249	0.048042	0.00082597	NaN	34.173	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181610	+		8472	18781	5956	5962							-0.018428401733444844
FDVNGESNM	9	Unmodified	_FDVNGESNM_					0	0	0			REV__ENSG00000067334|ENST00000436063|DNTTIP2	REV__ENSG00000067334|ENST00000436063|DNTTIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7029113769531	2	506.705657	1011.39676	-0.10685	-5.4142E-05	-3.5422	-0.0017948	-3.649	-0.001849	506.70381889951756	32.633	0.57901	32.579	32.357	32.936	-0.054337					21	12	2	0	0	0	0.76255	1	1942	1942		35.618	8.9254	1	55447	+		8473	16541	5957	5963	9735	9735					-0.10848222872914448
FDWRPVKLDYM	11	Unmodified	_FDWRPVKLDYM_					0	0	0			REV__ENSG00000090857|ENST00000288050|PDPR	REV__ENSG00000090857|ENST00000288050|PDPR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.57855224609375	3	490.579712	1468.71731	-0.28021	-0.00013746	0.0037758	1.8523E-06	-0.27643	-0.00013561	490.5797090913325	18.039	0.75284	17.962	17.746	18.499	-0.07671					70	23	5	0	0	0	0.7896	1	279	279		13.508	0	1	602520	+		8474	16996	5958	5964	9736	9736					0.001696597882983042
FDYDPNEK	8	Unmodified	_FDYDPNEK_					0	0	0		ENST00000577901.5_1_18:9914253-9936249:+|nuORF;ENSG00000101558|ENST00000400000|VAPA;nc|ENSG00000101558|Q9P0L0-2|VAPA;ENST00000563131.2_1_15:89744727-89744991:-|nuORF;ENST00000463370.5_1_20:57007450-57019288:+|nuORF;ENSG00000124164|ENST00000475243|VAPB	ENST00000577901.5_1_18:9914253-9936249:+|nuORF	ENST00000577901.5_1_18:9914253-9936249:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.2200317382812	2	514.221997	1026.42944	-1.709	-0.0008788	-2.1918	-0.0011271	-3.9008	-0.0020059	514.2207442821898	29.985	0.6973	29.985	29.672	30.369	0					57	22	3	0	0	0	0.91977	1	1332	1332		45.952	1.4209	1	371510			8475	1949	5959	5965	9737	9737					-0.08271692478433579
FDYLWANKK	9	Unmodified	_FDYLWANKK_					0	0	0		nc|ENSG00000144191|Q16281-2|CNGA3;ENSG00000144191|ENST00000272602|CNGA3;nc|ENSG00000144191|Q16281-3|CNGA3	nc|ENSG00000144191|Q16281-2|CNGA3	nc|ENSG00000144191|Q16281-2|CNGA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	593.2899780273438	2	592.808574	1183.60259	0.67871	0.00040235	2.5328	0.0015014	3.2115	0.0019038	592.8098496139179	89.358	0.66501	89.809	89.448	90.113	0.45058					31	15	3	0	0	0	0.20789	1	10583	10583		45.952	14.422	1	317530			8476	4696	5960	5966	9738	9738					0.018137183686121716
FDYLWANKK	9	Unmodified	_FDYLWANKK_					0	0	0		nc|ENSG00000144191|Q16281-2|CNGA3;ENSG00000144191|ENST00000272602|CNGA3;nc|ENSG00000144191|Q16281-3|CNGA3	nc|ENSG00000144191|Q16281-2|CNGA3	nc|ENSG00000144191|Q16281-2|CNGA3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	592.808574	1183.60259	-1.4433	-0.00085561	4.9161	0.0029143	3.4728	0.0020587	592.8112028647332	89.395	0.58105	89.866	89.558	90.139	0.47068	0.028595	0.0014561	NaN	45.952	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	473510			8477	4696	5960	5966							0.018137183686121716
FDYMRSWIQM	10	Oxidation (M)	_FDYMRSWIQM(Oxidation (M))_		FDYMRSWIQM(1)		FDYM(-50)RSWIQM(50)	0	0	1		nc|ENSG00000085511|Q9Y6R4-2|MAP3K4;ENSG00000085511|ENST00000392142|MAP3K4	nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.8739318847656	3	464.874019	1391.60023	-0.20473	-9.5173E-05	0.19328	8.9849E-05	-0.011452	-5.3239E-06	464.8740915645601	77.52	0.66667	77.925	77.676	78.343	0.40531					42	15	4	0	0	0	0.51401	1	8832	8832		54.722	22.688	2	651450			8478	1532	5961	5967	9739	9739		31			-0.07990821422981753
FDYMRSWIQM	10	Oxidation (M)	_FDYMRSWIQM(Oxidation (M))_		FDYMRSWIQM(1)		FDYM(-49)RSWIQM(49)	0	0	1		nc|ENSG00000085511|Q9Y6R4-2|MAP3K4;ENSG00000085511|ENST00000392142|MAP3K4	nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.8745422363281	3	464.874019	1391.60023	-0.32715	-0.00015209	0.62368	0.00028993	0.29652	0.00013785	464.87411315374146	77.423	1.1252	77.991	77.748	78.873	0.56836					47	26	3	0	0	0	0.57305	1	8838	8838		51.528	13.928	2	645350			8479	1532	5961	5967	9740	9740		31			-0.07990821422981753
FEAPIKLVF	9	Unmodified	_FEAPIKLVF_					0	0	0		nc|ENSG00000101294|Q8TCT9-5|HM13;nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000483310.5_1_20:30136863-30150236:+|nuORF;ENST00000472128.5_1_20:30136905-30155443:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF	nc|ENSG00000101294|Q8TCT9-5|HM13	nc|ENSG00000101294|Q8TCT9-5|HM13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.3140869140625	2	532.312961	1062.61137	-0.03296	-1.7545E-05	0.14982	7.9752E-05	0.11686	6.2207E-05	532.3127969994999	83.453	0.43671	83.519	83.293	83.729	0.066719					19	9	3	0	0	0	0.67345	2	8282	8282;8294		42.396	9.5837	1	101960			8480	1925	5962	5968	9741;9742	9741					0.08256692005124933
FECEVDPCPL	10	Unmodified	_FECEVDPCPL_					0	0	0			REV__chr12:44875353-44875507|39|14.69|0.69|4.4|-|ENST00000551601|NELL2,NELL2	REV__chr12:44875353-44875507|39|14.69|0.69|4.4|-|ENST00000551601|NELL2,NELL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.2382202148438	2	576.241018	1150.46748	-0.30586	-0.00017625	0.14834	8.5482E-05	-0.15752	-9.0767E-05	576.2409934715854	70.623	0.50249	70.661	70.423	70.925	0.038055					47	26	2	0	0	0	0.86589	1	6772	6772		29.15	6.5699	1	254570	+		8481	15530	5963	5969	9743	9743					-0.10173265879620885
FEDAAEIRL	9	Unmodified	_FEDAAEIRL_					0	0	0		ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF;ENST00000494618.1_1_2:232322276-232325237:-|nuORF	ENSG00000115053|ENST00000322723|NCL	ENSG00000115053|ENST00000322723|NCL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.275634765625	2	532.274564	1062.53457	-0.41896	-0.000223	1.1519	0.00061314	0.73296	0.00039014	532.2748298927087	59.182	0.69855	59.735	59.421	60.119	0.55323					32	17	3	0	0	0	0.15708	1	6242	6242		82.75	16.321	1	651850			8482	2809	5964	5970	9744	9744					0.0058084871798200766
FEDAAEIRL	9	Unmodified	_FEDAAEIRL_					0	0	0		ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF;ENST00000494618.1_1_2:232322276-232325237:-|nuORF	ENSG00000115053|ENST00000322723|NCL	ENSG00000115053|ENST00000322723|NCL	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	532.274564	1062.53457	-0.55692	-0.00029643	1.0621	0.00056534	0.5052	0.0002689	532.2748719639806	59.316	0.69667	59.707	59.358	60.055	0.39077	-0.014331	-5.1752E-05	NaN	82.75	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	582220			8483	2809	5964	5970							0.0058084871798200766
FEDPEGKIELP	11	Unmodified	_FEDPEGKIELP_					0	0	0		ENSG00000118492|ENST00000397944|ADGB	ENSG00000118492|ENST00000397944|ADGB	ENSG00000118492|ENST00000397944|ADGB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	637.3192138671875	2	637.319168	1272.62378	-0.8369	-0.00053337	-2.3831	-0.0015188	-3.22	-0.0020522	637.3173898736188	46.824	0.43333	46.795	46.592	47.025	-0.028782					15	9	2	0	0	0	0.6493	1	3886	3886		38.754	2.3069	1	126330			8484	3032	5965	5971	9745	9745					-0.0016236111314356094
FEELRDELQRF	11	Unmodified	_FEELRDELQRF_					0	0	0		ENST00000527315.5_1_15:69323805-69349033:+|nuORF;nc|ENSG00000290203|Q96PH1-4|NOX5;nc|ENSG00000290203|Q96PH1-6|NOX5;nc|ENSG00000290203|Q96PH1-3|NOX5;nc|ENSG00000290203|Q96PH1-2|NOX5;ENSG00000255346|ENST00000388866|NOX5	ENST00000527315.5_1_15:69323805-69349033:+|nuORF	ENST00000527315.5_1_15:69323805-69349033:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.76776123046875	3	494.584291	1480.73104	-1.0804	-0.00053433	3.2615	0.0016131	2.1812	0.0010788	494.58579331105335	38.722	0.58815	39.245	38.994	39.582	0.52236					32	13	3	0	0	0	0.17606	1	3207	3207		25.126	9.1192	1	118490			8485	8885	5966	5972	9746	9746					0.009906088210755115
FEEVFGFAIS	10	Unmodified	_FEEVFGFAIS_					0	0	0		ENSG00000179520|ENST00000323346|SLC17A8	ENSG00000179520|ENST00000323346|SLC17A8	ENSG00000179520|ENST00000323346|SLC17A8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.795166015625	2	573.279315	1144.54408	0.043004	2.4654E-05	-1.4897	-0.000854	-1.4467	-0.00082935	573.2783647455869	75.907	1.5037	76.475	75.503	77.006	0.56836					48	36	2	0	0	0	0.37624	1	8695	8695		34.173	14.176	1	220010			8486	7275	5967	5973	9747	9747					-0.022413829964762044
FEEVWQRRWWQ	11	Unmodified	_FEEVWQRRWWQ_					0	0	0			REV__nc|ENSG00000100258|Q9BU23-3|LMF2	REV__nc|ENSG00000100258|Q9BU23-3|LMF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.6024780273438	3	550.603908	1648.78989	0.89192	0.0004911	-2.3929	-0.0013176	-1.501	-0.00082647	550.6026403161143	26.147	0.68923	26.115	25.815	26.504	-0.032125					43	17	4	0	0	0	0.84494	1	1079	1079		6.3209	0.90796	1	135400	+		8487	17159	5968	5974	9748	9748					-0.008548700939172704
FEFDPNAR	8	Unmodified	_FEFDPNAR_					0	0	0		ENSG00000166670|ENST00000279441|MMP10	ENSG00000166670|ENST00000279441|MMP10	ENSG00000166670|ENST00000279441|MMP10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.2352600097656	2	498.232699	994.450845	-0.20051	-9.9903E-05	3.4021	0.001695	3.2015	0.0015951	498.23444640167236	29.746	0.38695	29.703	29.533	29.92	-0.043095					11	8	2	0	0	0	0.87064	1	1560	1560		29.15	1.2673	1	17768			8488	6219	5969	5975	9749	9749					-0.04660262659047021
FEFLQPHLD	9	Unmodified	_FEFLQPHLD_					0	0	0		ENST00000441602.5_1_7:92883193-92979232:+|nuORF;nc|ENSG00000004766|Q96JG6-3|VPS50;ENSG00000004766|ENST00000305866|VPS50;ENST00000471188.5_1_7:92970131-92979232:+|nuORF	ENST00000441602.5_1_7:92883193-92979232:+|nuORF	ENST00000441602.5_1_7:92883193-92979232:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.2877807617188	2	573.284931	1144.55531	-0.70198	-0.00040244	3.9499	0.0022644	3.248	0.001862	573.2872652633222	30.15	0.60518	30.175	29.842	30.447	0.025013					21	14	2	0	0	0	0.76764	1	1546	1546		34.173	7.3764	1	66782			8489	664	5970	5976	9750	9750					-0.011185609023186771
FEFNEQFKGK	10	Unmodified	_FEFNEQFKGK_					0	0	0			REV__ENST00000522077.1_1_8:136637855-136637972:-|nuORF	REV__ENST00000522077.1_1_8:136637855-136637972:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	637.3148803710938	2	637.31422	1272.61389	1.396	0.0008897	-1.0961	-0.00069859	0.29988	0.00019111	637.3134915549126	64.231	1.486	64.785	64.168	65.654	0.55386					61	35	4	0	0	0	0.76096	1	6937	6937		41.427	6.2746	1	470880	+		8490	28127	5971	5977	9751	9751					-0.011515043278677695
FEFPLKKLY	9	Unmodified	_FEFPLKKLY_					0	0	0			REV__ENSG00000073711|ENST00000264977|PPP2R3A	REV__ENSG00000073711|ENST00000264977|PPP2R3A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	592.76025390625	2	592.839342	1183.66413	0.72985	0.00043268	2.8221	0.001673	3.5519	0.0021057	592.8404917631227	49.985	0.20807	50.83	50.766	50.974	0.84501					6	4	2	0	0	0	0.16379	1	4917	4917		87.754	12.711	1	106540	+		8491	16676	5972	5978	9752	9752					0.0796465006797007
FEGAFKYK	8	Unmodified	_FEGAFKYK_					0	0	0		nc|ENSG00000074603|Q6V1X1-2|DPP8;ENSG00000074603|ENST00000300141|DPP8;nc|ENSG00000074603|Q6V1X1|DPP8;nc|ENSG00000074603|Q6V1X1-6|DPP8	nc|ENSG00000074603|Q6V1X1-2|DPP8	nc|ENSG00000074603|Q6V1X1-2|DPP8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2590026855469	2	495.258185	988.501818	-1.7096	-0.00084669	3.3579	0.001663	1.6483	0.00081635	495.25992726495855	40.741	2.1466	41.33	40.797	42.943	0.58915					138	58	4	0	0	0	0.89962	1	3501	3501		38.806	6.8513	1	7011700			8492	1309	5973	5979	9753	9753					0.007106863858098222
FEGGYQETP	9	Unmodified	_FEGGYQETP_					0	0	0		ENSG00000178814|ENST00000618853|OPLAH	ENSG00000178814|ENST00000618853|OPLAH	ENSG00000178814|ENST00000618853|OPLAH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.2195434570312	2	514.221997	1026.42944	0.27738	0.00014263	-4.227	-0.0021736	-3.9496	-0.002031	514.2197149185718	29.944	1.3268	29.929	29.112	30.438	-0.015167					73	38	4	0	0	0	0.71772	1	1517	1517		39.253	0	1	411270			8493	7226	5974	5980	9754	9754					-0.08271692478433579
FEGIVKGALYH	11	Unmodified	_FEGIVKGALYH_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	617.3356323242188	2	617.334956	1232.65536	0.19514	0.00012047	0.47399	0.00029261	0.66914	0.00041308	617.3352235507631	79.813	0.76144	80.229	79.913	80.674	0.41621					48	17	4	0	0	0	0.10023	1	9147	9147		93.143	1.878	1	1902600	+		8494	22575	5975	5981	9755	9755					0.048336764314626635
FEHLLGRKFQL	11	Unmodified	_FEHLLGRKFQL_					0	0	0			REV__ENSG00000249853|ENST00000312719|HS3ST5	REV__ENSG00000249853|ENST00000312719|HS3ST5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.2647705078125	3	463.266345	1386.7772	-1.1306	-0.00052377	0.90373	0.00041867	-0.22687	-0.0001051	463.26673430407317	56.96	0.71424	57.356	56.985	57.699	0.39672					45	16	4	0	0	0	0.69687	1	5914	5914		32.034	0.39986	1	788660	+		8495	23868	5976	5982	9756	9756					0.09928718513856438
FEKIKEGYY	9	Unmodified	_FEKIKEGYY_					0	0	0		nc|ENSG00000008118|Q96NX5-2|CAMK1G;ENSG00000008118|ENST00000361322|CAMK1G	nc|ENSG00000008118|Q96NX5-2|CAMK1G	nc|ENSG00000008118|Q96NX5-2|CAMK1G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.7991333007812	2	588.800414	1175.58628	-0.23894	-0.00014069	0.40703	0.00023966	0.1681	9.8976E-05	588.8003935335096	53.601	0.91781	54.185	53.914	54.832	0.58474					38	21	3	0	0	0	0.22631	1	5428	5428		71.296	4.8664	1	1164600			8496	735	5977	5983	9757	9757					0.005505924119233896
FEKRGIPEA	9	Unmodified	_FEKRGIPEA_					0	0	0		ENSG00000114735|ENST00000232854|HEMK1;ENST00000482974.1_1_3:50608553-50608853:+|nuORF	ENSG00000114735|ENST00000232854|HEMK1	ENSG00000114735|ENST00000232854|HEMK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.785099	1045.55564	-1.5034	-0.00078748	-1.832	-0.00095958	-3.3355	-0.0017471	523.7834808456315	86.925	0.6086	87.09	86.824	87.433	0.16473					18	13	2	0	0	0	0.20789	1	8524	8524		26.693	6.6961	1	58572			8497	2786	5978	5984	9758	9758					0.03468858817518594
FEMPSNKSRSL	11	Unmodified	_FEMPSNKSRSL_					0	0	0			REV__nc|ENSG00000136643|Q96S38-2|RPS6KC1	REV__nc|ENSG00000136643|Q96S38-2|RPS6KC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3922729492188	2	648.324262	1294.63397	1.6034	0.0010395	3.0178	0.0019565	4.6212	0.002996	648.3254950633254	106.54	0.22284	106.69	106.52	106.74	0.14842					6	4	2	0	0	0	0.17431	1	11412	11412		31.53	3.4483	1	44707	+		8498	19324	5979	5985	9759	9759					-0.0015607665955030825
FENAKIKRRVH	11	Unmodified	_FENAKIKRRVH_					0	0	0			REV__ENST00000295756.10_1_3:108573093-108573171:+|nuORF	REV__ENST00000295756.10_1_3:108573093-108573171:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.6073303222656	3	466.608993	1396.80515	-0.1162	-5.4221E-05	-1.9759	-0.00092196	-2.0921	-0.00097618	466.608028235663	100.63	2.2402	100.66	99.377	101.62	0.031036					154	52	4	0	0	0	0.76892	1	10608	10608		17.833	1.3033	1	499520	+		8499	24702	5980	5986	9760	9760					0.12262041493909237
FENGAGPLF	9	Unmodified	_FENGAGPLF_					0	0	0			REV__ENST00000526701.5_1_11:8724978-8732445:-|nuORF	REV__ENST00000526701.5_1_11:8724978-8732445:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.2298889160156	2	476.232168	950.449782	-0.98822	-0.00047062	-2.916	-0.0013887	-3.9042	-0.0018593	476.2306460268229	25.104	0.58154	25.167	24.921	25.503	0.063122					52	26	3	0	0	0	0.69624	1	904	904		40.778	1.972	1	136020	+		8500	28218	5981	5987	9761	9761					-0.02742477027948098
FEPCDDPEDSG	11	Unmodified	_FEPCDDPEDSG_					0	0	0			REV__ENSG00000168702|ENST00000389484|LRP1B	REV__ENSG00000168702|ENST00000389484|LRP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.7145385742188	2	605.713876	1209.4132	0.06347	3.8444E-05	3.2959	0.0019964	3.3594	0.0020348	605.7158245439867	27.661	0.72188	27.702	27.304	28.026	0.040834					53	23	3	0	0	0	0.7342	1	1280	1280		25.574	6.4705	1	161250	+		8501	21512	5982	5988	9762	9762					-0.18313186497493916
FEPEMAEWAW	10	Unmodified	_FEPEMAEWAW_					0	0	0			REV__ENST00000471836.1_1_22:44577677-44581773:+|nuORF	REV__ENST00000471836.1_1_22:44577677-44581773:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.392578125	2	648.273706	1294.53286	1.6034	0.0010394	-1.8327	-0.0011881	-0.22937	-0.00014869	648.2732416297564	106.09	0.202	106.24	106.18	106.39	0.14843					5	4	2	0	0	0	0.37624	1	11364	11364		29.15	5.6269	1	85105	+		8502	27240	5983	5989	9763	9763					-0.10262528362250123
FEPKQSFILY	10	Unmodified	_FEPKQSFILY_					0	0	0			REV__ENSG00000164292|ENST00000379982|RHOBTB3	REV__ENSG00000164292|ENST00000379982|RHOBTB3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.8984680175781	3	424.560535	1270.65977	-0.25982	-0.00011031	0.85316	0.00036222	0.59334	0.00025191	424.5609168516135	27.601	1.5742	27.504	27.094	28.669	-0.096945					107	36	4	0	0	0	0.37624	1	1757	1757		33.922	16.088	1	4915400	+		8503	21059	5984	5990	9764	9764					0.03527140854384925
FESIHFELTQ	10	Unmodified	_FESIHFELTQ_					0	0	0		nc|ENSG00000122483|Q5T9S5-2|CCDC18;nc|ENSG00000122483|Q5T9S5|CCDC18;ENSG00000122483|ENST00000690025|CCDC18	nc|ENSG00000122483|Q5T9S5-2|CCDC18	nc|ENSG00000122483|Q5T9S5-2|CCDC18	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2584533691406	3	417.539911	1249.5979	1.2603	0.00052623	-3.812	-0.0015917	-2.5517	-0.0010654	417.5381141925376	22.61	0.39567	22.192	22.016	22.412	-0.41879					12	8	2	0	0	0	0.37624	1	938	938		25.126	7.2928	1	31353			8504	3227	5985	5991	9765	9765					-0.016912105647634235
FESKPTMKDCE	11	Unmodified	_FESKPTMKDCE_					0	0	0			REV__nc|ENSG00000101605|P52179-2|MYOM1	REV__nc|ENSG00000101605|P52179-2|MYOM1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.8614196777344	3	438.861668	1313.56317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.51	1	114.6	114.1	115.1	0.098114								0	0	0	0.56276	1	12248	12248		21.78	0.94327	1		+		8505	17291	5986	5992	9766	9766					-0.08106537759363164
FESLLACLKMD	11	Unmodified	_FESLLACLKMD_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	635.3170776367188	2	635.314517	1268.61448	0.22642	0.00014385	3.581	0.0022751	3.8074	0.0024189	635.3163802463071	69.337	0.47246	69.721	69.436	69.909	0.38416					23	11	3	0	0	0	0.53361	1	7652	7652		49.536	5.1589	1	403630			8506	1504	5987	5993	9767	9767					-0.009081689946697225
FETFKKGLGLK	11	Unmodified	_FETFKKGLGLK_					0	0	0		ENST00000559562.1_1_15:45362663-45365725:+|nuORF;ENST00000559230.5_1_15:45353218-45365725:+|nuORF;ENSG00000140263|ENST00000267814|SORD	ENST00000559562.1_1_15:45362663-45365725:+|nuORF	ENST00000559562.1_1_15:45362663-45365725:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3760986328125	2	634.374081	1266.73361	2.1873	0.0013876	3.021	0.0019164	5.2083	0.003304	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.61369	2	13389	13278;13389		42.864	5.0528	1	6886400			8507	4417	5988	5994	9768;9769	9769					0.11091109016683731
FETFKKGLGLK	11	Unmodified	_FETFKKGLGLK_					0	0	0		ENST00000559562.1_1_15:45362663-45365725:+|nuORF;ENST00000559230.5_1_15:45353218-45365725:+|nuORF;ENSG00000140263|ENST00000267814|SORD	ENST00000559562.1_1_15:45362663-45365725:+|nuORF	ENST00000559562.1_1_15:45362663-45365725:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3762817382812	2	634.374081	1266.73361	6.6613	0.0042258	-2.0557	-0.0013041	4.6056	0.0029217	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.6921	1	13420	13420		32.812	0	1	7041100			8508	4417	5988	5994	9770	9770					0.11091109016683731
FEVATEYLR	9	Unmodified	_FEVATEYLR_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.2816772460938	2	564.290214	1126.56587	0.28434	0.00016045	0.95726	0.00054017	1.2416	0.00070062	564.2911565970421	65.257	0.32263	65.643	65.355	65.678	0.38614					12	7	2	0	0	0	0.20789	1	7070	7070		63.306	11.007	1	125380	+		8509	18336	5989	5995	9771	9771					0.007654217520894235
FEVATEYLR	9	Unmodified	_FEVATEYLR_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	564.290214	1126.56587	0.58808	0.00033185	1.2589	0.0007104	1.847	0.0010423	564.2909269477435	65.014	0.40672	65.568	65.37	65.776	0.55386	-0.037428	0.00014411	NaN	63.306	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78406	+		8510	18336	5989	5995							0.007654217520894235
FEVRSLTRI	9	Unmodified	_FEVRSLTRI_					0	0	0			REV__nc|ENSG00000196376|Q5T1Q4-2|SLC35F1	REV__nc|ENSG00000196376|Q5T1Q4-2|SLC35F1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.825439453125	2	560.827298	1119.64004	0.41234	0.00023125	-2.2425	-0.0012576	-1.8301	-0.0010264	560.825892688675	50.894	0.58826	50.944	50.645	51.233	0.0499					49	18	3	0	0	0	0.73802	1	4016	4016		37.812	7.3079	1	1036600	+		8511	23121	5990	5996	9772	9772					0.08500809634256257
FEYDVMGQNI	10	Unmodified	_FEYDVMGQNI_					0	0	0		nc|ENSG00000106772|Q8WUY3-4|PRUNE2;ENSG00000106772|ENST00000376718|PRUNE2;nc|ENSG00000106772|Q8WUY3-2|PRUNE2;nc|ENSG00000106772|Q8WUY3-3|PRUNE2	nc|ENSG00000106772|Q8WUY3-4|PRUNE2	nc|ENSG00000106772|Q8WUY3-4|PRUNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.2722778320312	2	608.271164	1214.52777	-1.3557	-0.00082464	3.4737	0.0021129	2.1179	0.0012883	608.273212366521	66.999	0.61171	67.027	66.721	67.332	0.02858					64	29	3	0	0	0	0.85981	1	6355	6355		35.152	5.982	1	210580			8512	2317	5991	5997	9773	9773					-0.07090832224866972
FEYQSNQTL	9	Unmodified	_FEYQSNQTL_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	565.2636108398438	2	565.261653	1128.50875	-0.8423	-0.00047612	3.1347	0.0017719	2.2924	0.0012958	565.2632207445736	42.281	0.76114	42.252	41.952	42.713	-0.029461					34	18	3	0	0	0	0.26953	1	3165	3165		67.494	3.2864	1	457480	+		8513	20437;29946	5992	5998	9774	9774					-0.05036045524275323
FEYQSNQTL	9	Unmodified	_FEYQSNQTL_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	565.264404296875	2	565.261653	1128.50875	-0.93434	-0.00052815	3.0056	0.0016989	2.0713	0.0011708	565.2632126335383	42.207	0.73315	42.169	41.936	42.669	-0.038223					39	17	3	0	0	0	0.48102	1	3256	3256		52.937	5.0211	1	616890	+		8514	20437;29946	5992	5998	9775	9775					-0.05036045524275323
FFAEVVEYD	9	Unmodified	_FFAEVVEYD_					0	0	0			REV__ENSG00000151470|ENST00000425929|C4orf33	REV__ENSG00000151470|ENST00000425929|C4orf33	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	559.7640991210938	2	559.755672	1117.49679	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.789	1	50.797	50.297	51.297	0.0077438								0	0	0	0.2969	1	4350	4350		31.955	1.6371	1		+		8515	20252	5993	5999	9776	9776					-0.057256622674685786
FFAGRLKF	8	Unmodified	_FFAGRLKF_					0	0	0			REV__ENST00000465626.1_1_3:31921129-32022434:-|nuORF	REV__ENST00000465626.1_1_3:31921129-32022434:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.25634765625	2	493.284537	984.554522	0.74277	0.0003664	-2.0429	-0.0010078	-1.3002	-0.00064136	493.28309158633766	50.983	0.44753	51.735	51.491	51.938	0.75174					15	10	2	0	0	0	0.4196	1	5042	5042		52.299	5.5327	1	106010	+		8516	27112	5994	6000	9777	9777					0.06162689239260999
FFAGRLKF	8	Unmodified	_FFAGRLKF_					0	0	0			REV__ENST00000465626.1_1_3:31921129-32022434:-|nuORF	REV__ENST00000465626.1_1_3:31921129-32022434:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	493.284537	984.554522	-0.33148	-0.00016351	0.59354	0.00029279	0.26207	0.00012927	493.28466714248896	51.202	0.37226	51.637	51.492	51.864	0.43505	-0.048854	0.0011058	NaN	52.299	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165540	+		8517	27112	5994	6000							0.06162689239260999
FFCEVQALLK	10	Unmodified	_FFCEVQALLK_					0	0	0		ENSG00000185372|ENST00000641551|OR2V1	ENSG00000185372|ENST00000641551|OR2V1	ENSG00000185372|ENST00000641551|OR2V1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3195190429688	2	599.32046	1196.62637	0.5273	0.00031602	2.8151	0.0016872	3.3424	0.0020032	599.3217465646096	59.463	0.68615	59.577	59.217	59.903	0.11396					33	19	2	0	0	0	0.4892	1	5113	5113		56.721	0.28726	1	238140			8518	7708	5995	6001	9778	9778					0.035918158108188436
FFDERDVVL	9	Unmodified	_FFDERDVVL_					0	0	0			REV__nc|ENSG00000149646|Q96M20-3|CNBD2	REV__nc|ENSG00000149646|Q96M20-3|CNBD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.291015625	2	570.290214	1138.56587	0.18145	0.00010348	-0.67423	-0.00038451	-0.49278	-0.00028103	570.2899104674859	65.98	0.55029	66.366	66.11	66.66	0.38582					22	13	2	0	0	0	0.58668	1	7191	7191		47.657	1.6851	1	249950	+		8519	20188	5996	6002	9779	9779					0.0021342175209611014
FFDERDVVL	9	Unmodified	_FFDERDVVL_					0	0	0			REV__nc|ENSG00000149646|Q96M20-3|CNBD2	REV__nc|ENSG00000149646|Q96M20-3|CNBD2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	570.290214	1138.56587	0.18145	0.00010348	-0.67423	-0.00038451	-0.49278	-0.00028103	570.2899104674859	65.98	0.55029	66.366	66.11	66.66	0.38582	-0.0017711	0.00031915	NaN	47.657	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	249950	+		8520	20188	5996	6002							0.0021342175209611014
FFDERDVVL	9	Unmodified	_FFDERDVVL_					0	0	0			REV__nc|ENSG00000149646|Q96M20-3|CNBD2	REV__nc|ENSG00000149646|Q96M20-3|CNBD2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	570.290214	1138.56587	0.62691	0.00035752	-1.1039	-0.00062955	-0.477	-0.00027203	570.2895433447037	65.817	0.53743	66.369	66.164	66.701	0.5526	0.0017711	-0.00017093	NaN	47.657	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	239510	+		8521	20188	5996	6002							0.0021342175209611014
FFDHSGTL	8	Unmodified	_FFDHSGTL_					0	0	0		ENSG00000118363|ENST00000263672|SPCS2	ENSG00000118363|ENST00000263672|SPCS2	ENSG00000118363|ENST00000263672|SPCS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.2159423828125	2	462.216517	922.418482	-0.29755	-0.00013753	0.51406	0.00023761	0.21651	0.00010008	462.2166423299105	49.853	0.86497	50.301	50.061	50.926	0.44761					32	20	2	0	0	0	0.27282	2	4883	4874;4883		105.27	33.891	1	991730			8522	3024	5997	6003	9780;9781	9781					-0.04583050062035454
FFDHSGTL	8	Unmodified	_FFDHSGTL_					0	0	0		ENSG00000118363|ENST00000263672|SPCS2	ENSG00000118363|ENST00000263672|SPCS2	ENSG00000118363|ENST00000263672|SPCS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.2167663574219	2	462.216517	922.418482	0.48765	0.0002254	-0.066787	-3.087E-05	0.42087	0.00019453	462.2162601288946	49.699	0.78276	50.544	50.272	51.055	0.84501					34	18	3	0	0	0	0.35733	1	4882	4882		83.287	3.348	1	1045100			8523	3024	5997	6003	9782	9782					-0.04583050062035454
FFDNISSEL	9	Unmodified	_FFDNISSEL_					0	0	0		nc|ENSG00000149657|Q9BX40-2|LSM14B;ENSG00000149657|ENST00000279068|LSM14B	nc|ENSG00000149657|Q9BX40-2|LSM14B	nc|ENSG00000149657|Q9BX40-2|LSM14B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.2532958984375	2	536.253297	1070.49204	-0.50121	-0.00026878	0.45198	0.00024238	-0.049234	-2.6402E-05	536.2534543475545	83.426	2.1577	83.857	83.414	85.572	0.43108					138	52	5	0	0	0	1.1203E-13	7	9691	9647;9655;9667;9679;9691;9704;9718		172.03	57.973	1	5344500			8524	5045	5998	6004	9783;9784;9785;9786;9787;9788;9789	9787					-0.04038546410242816
FFDNISSEL	9	Unmodified	_FFDNISSEL_					0	0	0		nc|ENSG00000149657|Q9BX40-2|LSM14B;ENSG00000149657|ENST00000279068|LSM14B	nc|ENSG00000149657|Q9BX40-2|LSM14B	nc|ENSG00000149657|Q9BX40-2|LSM14B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2535400390625	2	536.253297	1070.49204	-0.2688	-0.00014415	0.13075	7.0114E-05	-0.13805	-7.4031E-05	536.2532980722682	83.44	2.0793	83.895	83.438	85.517	0.45556					130	50	4	0	0	0	3.7454E-20	7	9706	9685;9695;9706;9718;9730;9742;9757		176.09	52.007	1	5435300			8525	5045	5998	6004	9790;9791;9792;9793;9794;9795;9796	9792					-0.04038546410242816
FFDPSLLHL	9	Unmodified	_FFDPSLLHL_					0	0	0		nc|ENSG00000087111|Q96S52-2|PIGS;ENSG00000087111|ENST00000308360|PIGS;ENST00000487231.5_1_17:26881240-26882135:-|nuORF;ENST00000492429.2_1_17:26881240-26883317:-|nuORF	nc|ENSG00000087111|Q96S52-2|PIGS	nc|ENSG00000087111|Q96S52-2|PIGS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.7923583984375	2	544.792392	1087.57023	-0.46271	-0.00025208	0.031724	1.7283E-05	-0.43098	-0.0002348	544.7923655304887	86.392	0.81355	86.835	86.531	87.344	0.44331					45	19	3	0	0	0	0.15928	1	10133	10133		82.305	24.494	1	738040			8526	1568	5999	6005	9797	9797					0.0299493096565584
FFDPSLLHL	9	Unmodified	_FFDPSLLHL_					0	0	0		nc|ENSG00000087111|Q96S52-2|PIGS;ENSG00000087111|ENST00000308360|PIGS;ENST00000487231.5_1_17:26881240-26882135:-|nuORF;ENST00000492429.2_1_17:26881240-26883317:-|nuORF	nc|ENSG00000087111|Q96S52-2|PIGS	nc|ENSG00000087111|Q96S52-2|PIGS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.7918701171875	2	544.792392	1087.57023	-0.89691	-0.00048863	0.6701	0.00036506	-0.22682	-0.00012357	544.792684108514	86.526	0.89532	86.98	86.655	87.55	0.45429					47	21	3	0	0	0	0.31972	2	10172	10172;10190		63.306	22.528	1	615980			8527	1568	5999	6005	9798;9799	9798					0.0299493096565584
FFEGVKIKKTI	11	Unmodified	_FFEGVKIKKTI_					0	0	0			REV__ENSG00000211456|ENST00000389061|SACM1L	REV__ENSG00000211456|ENST00000389061|SACM1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2676086425781	3	437.267463	1308.78056	1.089	0.00047619	-0.35859	-0.0001568	0.73042	0.00031939	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.73647	2	4717	4717;4805		25.068	9.4283	1	2745300	+		8528	23597	6000	6006	9800;9801	9800					0.1385196856786024
FFFFFVNL	8	Unmodified	_FFFFFVNL_					0	0	0		ENST00000325642.7_1_14:60759216-60759402:+|nuORF	ENST00000325642.7_1_14:60759216-60759402:+|nuORF	ENST00000325642.7_1_14:60759216-60759402:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.782470703125	2	540.781296	1079.54804	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.92	1	59.953	59.453	60.453	0.032822								0	0	0	0.28381	1	5555	5555		54.765	4.7401	1				8529	10072	6001	6007	9802	9802					0.01144751287915824
FFFFLILTI	9	Unmodified	_FFFFLILTI_					0	0	0			REV__ENST00000272462.2_1_2:110841508-110841715:-|nuORF	REV__ENST00000272462.2_1_2:110841508-110841715:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	580.8421630859375	2	580.841354	1159.66815	-0.77464	-0.00044995	-0.45918	-0.00026671	-1.2338	-0.00071665	580.8409079649531	69.999	0.8299	69.999	69.758	70.588	0					106	43	3	0	0	0	0.7932	1	6271	6271		20.482	2.1574	1	7674300	+		8530	24546	6002	6008	9803	9803					0.09470739561675146
FFFIRIAL	8	Unmodified	_FFFIRIAL_					0	0	0			REV__ENST00000342374.4_1_20:43127230-43127344:-|nuORF	REV__ENST00000342374.4_1_20:43127230-43127344:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8079833984375	2	513.810388	1025.60622	-0.38547	-0.00019806	-2.1955	-0.001128	-2.5809	-0.0013261	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.86288	1	4007	4007		26.796	2.5934	1	1377600	+		8531	25273	6003	6009	9804	9804					0.0944443293317363
FFFLLFLLLLW	11	Unmodified	_FFFLLFLLLLW_					0	0	0			REV__ENSG00000204140|ENST00000373861|CLPSL1	REV__ENSG00000204140|ENST00000373861|CLPSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.29888916015625	3	491.296582	1470.86792	2.8435	0.001397	2.0956	0.0010296	4.9391	0.0024265	491.29766695504253	111.68	0.68246	111.66	111.39	112.07	-0.025414					47	26	2	0	0	0	0.8398	1	12363	12363		6.6596	3.0405	1	55512	+		8532	23464	6004	6010	9805	9805					0.15131794509443353
FFFLLFLLLLW	11	Unmodified	_FFFLLFLLLLW_					0	0	0			REV__ENSG00000204140|ENST00000373861|CLPSL1	REV__ENSG00000204140|ENST00000373861|CLPSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.29901123046875	3	491.296582	1470.86792	2.8436	0.001397	2.2865	0.0011233	5.13	0.0025204	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.78085	4	13196	12842;12866;12876;13196		15.333	8.6735	1	3274400	+		8533	23464	6004	6010	9806;9807;9808;9809	9809					0.15131794509443353
FFFQLVLLLGL	11	Unmodified	_FFFQLVLLLGL_					0	0	0		ENSG00000167895|ENST00000318430|TMC8;nc|ENSG00000167895|Q8IU68-2|TMC8	ENSG00000167895|ENST00000318430|TMC8	ENSG00000167895|ENST00000318430|TMC8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2679748535156	3	437.268804	1308.78458	-1.7231	-0.00075344	-0.46527	-0.00020345	-2.1883	-0.00095689	437.26850375985913	50.916	1.5264	50.916	50.06	51.586	0					171	39	5	0	0	0	0.732	2	4112	4093;4112		26.063	0.40354	1	3001200			8534	6337	6005	6011	9810;9811	9811					0.1425405806157869
FFFQLVLLLGL	11	Unmodified	_FFFQLVLLLGL_					0	0	0		ENSG00000167895|ENST00000318430|TMC8;nc|ENSG00000167895|Q8IU68-2|TMC8	ENSG00000167895|ENST00000318430|TMC8	ENSG00000167895|ENST00000318430|TMC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26788330078125	3	437.268804	1308.78458	-0.040503	-1.7711E-05	-2.1267	-0.00092992	-2.1672	-0.00094763	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.75906	2	4299	4299;4321		20.03	4.0237	1	2735300			8535	6337	6005	6011	9812;9813	9812					0.1425405806157869
FFFQLVLLLGL	11	Unmodified	_FFFQLVLLLGL_					0	0	0		ENSG00000167895|ENST00000318430|TMC8;nc|ENSG00000167895|Q8IU68-2|TMC8	ENSG00000167895|ENST00000318430|TMC8	ENSG00000167895|ENST00000318430|TMC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2682800292969	3	437.268804	1308.78458	-0.7643	-0.0003342	-1.416	-0.00061919	-2.1803	-0.00095339	437.2680989446087	50.458	1.6052	50.435	49.633	51.238	-0.02343					188	43	5	0	0	0	0.732	1	4442	4442		26.063	0	1	2919200			8536	6337	6005	6011	9814	9814					0.1425405806157869
FFFQLVLLLGL	11	Unmodified	_FFFQLVLLLGL_					0	0	0		ENSG00000167895|ENST00000318430|TMC8;nc|ENSG00000167895|Q8IU68-2|TMC8	ENSG00000167895|ENST00000318430|TMC8	ENSG00000167895|ENST00000318430|TMC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2676086425781	3	437.268804	1308.78458	-0.73822	-0.0003228	-1.4092	-0.00061619	-2.1474	-0.00093899	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.75906	1	4519	4519		20.03	1.4994	1	3639500			8537	6337	6005	6011	9815	9815					0.1425405806157869
FFFQLVLLLGL	11	Unmodified	_FFFQLVLLLGL_					0	0	0		ENSG00000167895|ENST00000318430|TMC8;nc|ENSG00000167895|Q8IU68-2|TMC8	ENSG00000167895|ENST00000318430|TMC8	ENSG00000167895|ENST00000318430|TMC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26873779296875	3	437.268804	1308.78458	1.2133	0.00053055	-3.3842	-0.0014798	-2.1708	-0.00094924	437.2672396896614	50.554	1.7579	50.562	49.504	51.262	0.0077477					187	47	5	0	0	0	0.75906	1	4340	4340		20.03	0.40354	1	3327600			8538	6337	6005	6011	9816	9816					0.1425405806157869
FFFQLVLLLGL	11	Unmodified	_FFFQLVLLLGL_					0	0	0		ENSG00000167895|ENST00000318430|TMC8;nc|ENSG00000167895|Q8IU68-2|TMC8	ENSG00000167895|ENST00000318430|TMC8	ENSG00000167895|ENST00000318430|TMC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2680969238281	3	437.268804	1308.78458	0.28665	0.00012534	-2.386	-0.0010433	-2.0994	-0.000918	437.2676689275105	50.631	1.3868	50.681	50.015	51.402	0.049896					192	41	5	0	0	0	0.732	2	4060	4027;4060		26.063	3.5018	1	2963500			8539	6337	6005	6011	9817;9818	9818					0.1425405806157869
FFFQLVLLLGL	11	Unmodified	_FFFQLVLLLGL_					0	0	0		ENSG00000167895|ENST00000318430|TMC8;nc|ENSG00000167895|Q8IU68-2|TMC8	ENSG00000167895|ENST00000318430|TMC8	ENSG00000167895|ENST00000318430|TMC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26776123046875	3	437.268804	1308.78458	0.29718	0.00012995	-2.3878	-0.0010441	-2.0906	-0.00091417	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.75906	1	4188	4188		20.03	0.7678	1	4533800			8540	6337	6005	6011	9819	9819					0.1425405806157869
FFHITIDIR	9	Unmodified	_FFHITIDIR_					0	0	0		ENSG00000134910|ENST00000392708|STT3A;nc|ENSG00000134910|P46977-2|STT3A;ENST00000534472.5_1_11:125465789-125479519:+|nuORF	ENSG00000134910|ENST00000392708|STT3A	ENSG00000134910|ENST00000392708|STT3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	581.322509765625	2	581.324391	1160.63423	-0.86066	-0.00050032	0.8051	0.00046803	-0.055553	-3.2295E-05	581.3247082840045	63.932	0.53383	63.932	63.74	64.273	0					39	24	2	0	0	0	0.78058	1	5610	5610		30.504	1.3336	1	78636			8541	3972	6006	6012	9820	9820					0.06033711122586283
FFHLLGAFIP	10	Unmodified	_FFHLLGAFIP_					0	0	0			REV__chr1:81981150-81981808|38|12.34|0.54|4.51|+|ENST00000674489|ADGRL2,ADGRL2	REV__chr1:81981150-81981808|38|12.34|0.54|4.51|+|ENST00000674489|ADGRL2,ADGRL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	581.3248291015625	2	581.326402	1160.63825	-0.86065	-0.00050032	-2.6549	-0.0015433	-3.5155	-0.0020437	581.3247082840045	63.932	0.53383	63.932	63.74	64.273	0					39	24	2	0	0	0	0.86786	1	5620	5620		26.796	1.222	1	78636	+		8542	15456	6007	6013	9821	9821					0.0643580061632747
FFINVFIKFHI	11	Unmodified	_FFINVFIKFHI_					0	0	0		ENST00000437941.6_1_1:85113065-85113113:-|nuORF	ENST00000437941.6_1_1:85113065-85113113:-|nuORF	ENST00000437941.6_1_1:85113065-85113113:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	475.9428405761719	3	475.607819	1423.80163	-1.1711	-0.00055696	2.5807	0.0012274	1.4097	0.00067045	475.6088239953205	51.667	0.52666	51.68	51.398	51.925	0.01244					30	12	3	0	0	0	0.74405	1	4450	4450		23.378	6.8481	1	155360			8543	11746	6008	6014	9822	9822					0.10667978667356692
FFIPTLVMII	10	Unmodified	_FFIPTLVMII_					0	0	0		ENSG00000146385|ENST00000275200|TAAR8	ENSG00000146385|ENST00000275200|TAAR8	ENSG00000146385|ENST00000275200|TAAR8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.356689453125	2	597.353771	1192.69299	1.5032	0.00089792	2.3496	0.0014036	3.8528	0.0023015	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.86201	1	11007	11007		24.203	2.2429	1	1501500			8544	4841	6009	6015	9823	9823					0.10435051372724047
FFIRRIQKL	9	Unmodified	_FFIRRIQKL_					0	0	0		ENST00000457262.1_1_10:43062145-43062928:+|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	610.884033203125	2	610.88495	1219.75535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.667	1	17.712	17.212	18.212	0.0457								0	0	0	0.31472	1	267	267		25.45	4.5032	1				8545	11976	6010	6016	9824	9824					0.15425958555942998
FFKDWEHLK	9	Unmodified	_FFKDWEHLK_					0	0	0		ENST00000441360.1_1_1:234802202-234802532:+|nuORF	ENST00000441360.1_1_1:234802202-234802532:+|nuORF	ENST00000441360.1_1_1:234802202-234802532:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.3212890625	2	625.321848	1248.62914	-0.68478	-0.00042821	-2.4274	-0.0015179	-3.1122	-0.0019461	625.3201576946594	64.459	1.2974	64.486	64.064	65.361	0.027138					89	41	4	0	0	0	0.19953	1	6053	6053		73.975	8.1716	1	457250			8546	11783	6011	6017	9825	9825					0.014774072599720967
FFKGSILSRLK	11	Unmodified	_FFKGSILSRLK_					0	0	0		ENSG00000184564|ENST00000647374|SLITRK6	ENSG00000184564|ENST00000647374|SLITRK6	ENSG00000184564|ENST00000647374|SLITRK6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3930053710938	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.7144	2	12607	12607;12843		29.17	10.908	1	2297700			8547	7622	6012	6018	9826;9827	9826					0.14054504144928615
FFKKEKDRFKI	11	Unmodified	_FFKKEKDRFKI_					0	0	0		ENSG00000187889|ENST00000343433|FYB2	ENSG00000187889|ENST00000343433|FYB2	ENSG00000187889|ENST00000343433|FYB2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.95953369140625	3	495.9574	1484.85037	-0.73867	-0.00036635	4.4593	0.0022116	3.7207	0.0018453	495.9590677290455	104.07	2.3788	104.07	103.26	105.64	0					153	57	4	0	0	0	0.7896	1	10666	10666		13.508	1.0751	1	779320			8548	7890	6013	6019	9828	9828					0.12733847236449947
FFKKKILLGAS	11	Unmodified	_FFKKKILLGAS_					0	0	0		ENST00000373670.5_1_9:125611733-125611871:-|nuORF	ENST00000373670.5_1_9:125611733-125611871:-|nuORF	ENST00000373670.5_1_9:125611733-125611871:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3795166015625	2	626.394816	1250.77508	-0.052635	-3.297E-05	3.2307	0.0020237	3.1781	0.0019907	626.3970443728168	106.08	0.20775	106.08	106.01	106.22	0					10	4	3	0	0	0	0.17586	1	10975	10975		18.262	6.7511	1	171990			8549	10751	6014	6020	9829	9829					0.15972289776050275
FFKKKILLGAS	11	Unmodified	_FFKKKILLGAS_					0	0	0		ENST00000373670.5_1_9:125611733-125611871:-|nuORF	ENST00000373670.5_1_9:125611733-125611871:-|nuORF	ENST00000373670.5_1_9:125611733-125611871:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.9222717285156	3	417.932303	1250.77508	3.18	0.001329	-2.8999	-0.001212	0.2801	0.00011706	417.93008929373985	105.71	0.52039	105.75	105.59	106.11	0.038322					16	12	2	0	0	0	0.17586	1	11586	11586		11.932	10.409	1	142690			8550	10751	6014	6020	9830	9830					0.15972289776050275
FFKLIGKRI	9	Unmodified	_FFKLIGKRI_					0	0	0			REV__ENSG00000167359|ENST00000380211|OR51I1	REV__ENSG00000167359|ENST00000380211|OR51I1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3590698242188	2	561.363319	1120.71209	-1.1522	-0.00064679	0.74579	0.00041866	-0.40638	-0.00022813	561.3636203796618	43.91	1.2503	44.684	44.223	45.473	0.7738					84	30	4	0	0	0	0.7932	3	3992	3992;4006;4027		23.042	7.4007	1	1618600	+		8551	21380	6015	6021	9831;9832;9833	9831					0.1565576877865169
FFKQQYAV	8	Unmodified	_FFKQQYAV_					0	0	0			REV__ENSG00000080200|ENST00000389622|CRYBG3	REV__ENSG00000080200|ENST00000389622|CRYBG3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.95751953125	2	515.77146	1029.52837	-1.3215	-0.0006816	3.4776	0.0017937	2.1561	0.001112	516.2749499021492	89.515	0.49945	89.986	89.64	90.139	0.47068					29	11	3	0	0	0	0.4196	1	10603	10603		44.531	18.957	1	144230	+		8552	16797	6016	6022	9834	9834					0.014783752771336367
FFKVIPVK	8	Unmodified	_FFKVIPVK_					0	0	0			REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.3139343261719	2	489.312764	976.610974	-1.0417	-0.00050969	3.6265	0.0017745	2.5849	0.0012648	489.31444436731414	95.161	1.948	95.208	94.748	96.696	0.046989					116	45	4	0	0	0	0.81724	1	10106	10106		14.664	0	1	1311400	+		8553	16849	6017	6023	9835	9835					0.12173317075939849
FFKVIPVK	8	Unmodified	_FFKVIPVK_					0	0	0			REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.3141784667969	2	489.312764	976.610974	-0.66551	-0.00032564	3.2724	0.0016012	2.6069	0.0012756	489.3142377106515	95.017	1.7009	95.248	94.736	96.437	0.23103					105	40	4	0	0	0	0.80706	1	9788	9788		19.36	4.6959	1	1344100	+		8554	16849	6017	6023	9836	9836					0.12173317075939849
FFLEAGSLPY	10	Unmodified	_FFLEAGSLPY_					0	0	0		ENST00000486482.1_1_19:10221837-10222140:+|nuORF	ENST00000486482.1_1_19:10221837-10222140:+|nuORF	ENST00000486482.1_1_19:10221837-10222140:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	572.2893676757812	2	572.289682	1142.56481	-1.0194	-0.0005834	-2.8099	-0.0016081	-3.8293	-0.0021915	572.2881114485577	53.875	0.57182	53.87	53.598	54.17	-0.0053711					29	14	3	0	0	0	0.6116	1	4725	4725		49.442	3.4693	1	185200			8555	12581	6018	6024	9837	9837					-0.0007679261677822069
FFLELFHRN	9	Unmodified	_FFLELFHRN_					0	0	0		ENST00000577830.5_2_17:55938859-55939276:-|nuORF	ENST00000577830.5_2_17:55938859-55939276:-|nuORF	ENST00000577830.5_2_17:55938859-55939276:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.8195190429688	2	611.822015	1221.62948	0.27483	0.00016815	-4.1773	-0.0025558	-3.9025	-0.0023876	611.8192990481751	58.365	0.50563	58.335	58.063	58.568	-0.030499					25	13	3	0	0	0	0.76255	1	5429	5429		35.618	5.1146	1	123810			8556	14073	6019	6025	9838	9838					0.02752826979872225
FFLELFHRN	9	Unmodified	_FFLELFHRN_					0	0	0		ENST00000577830.5_2_17:55938859-55939276:-|nuORF	ENST00000577830.5_2_17:55938859-55939276:-|nuORF	ENST00000577830.5_2_17:55938859-55939276:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	611.822015	1221.62948	-0.39655	-0.00024262	-3.7883	-0.0023177	-4.1848	-0.0025604	611.8197238617739	58.347	0.49684	58.333	58.077	58.574	-0.013638	0.021518	-0.00026843	NaN	35.618	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90058			8557	14073	6019	6025							0.02752826979872225
FFLELFHRN	9	Unmodified	_FFLELFHRN_					0	0	0		ENST00000577830.5_2_17:55938859-55939276:-|nuORF	ENST00000577830.5_2_17:55938859-55939276:-|nuORF	ENST00000577830.5_2_17:55938859-55939276:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	611.822015	1221.62948	-1.3718	-0.00083932	-2.3181	-0.0014182	-3.6899	-0.0022576	611.8202143204112	58.233	0.5024	58.267	57.992	58.494	0.033905	-0.044792	0.0015306	NaN	35.618	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105530			8558	14073	6019	6025							0.02752826979872225
FFLKRYFI	8	Unmodified	_FFLKRYFI_					0	0	0			REV__ENST00000535340.5_1_11:18591643-18610207:-|nuORF	REV__ENST00000535340.5_1_11:18591643-18610207:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3302001953125	2	567.328945	1132.64334	1.203	0.00068247	1.7348	0.00098418	2.9377	0.0016667	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.88915	1	10789	10789		35.201	2.3883	1	4990000	+		8559	28385	6020	6026	9839	9839					0.08232104478929614
FFLRNKEFV	9	Unmodified	_FFLRNKEFV_					0	0	0		nc|ENSG00000128512|Q8N1I0|DOCK4;ENSG00000128512|ENST00000428084|DOCK4;nc|ENSG00000128512|Q8N1I0-2|DOCK4	nc|ENSG00000128512|Q8N1I0|DOCK4	nc|ENSG00000128512|Q8N1I0|DOCK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	600.3331909179688	2	600.332216	1198.64988	-0.53491	-0.00032112	3.3759	0.0020267	2.841	0.0017056	600.3340485202916	94.432	2.5436	94.5	93.254	95.798	0.068336					116	60	2	0	0	0	0.77546	1	9817	9817		31.955	2.7848	1	428900			8560	3544	6021	6027	9840	9840					0.05849997639643334
FFLRNKEFV	9	Unmodified	_FFLRNKEFV_					0	0	0		nc|ENSG00000128512|Q8N1I0|DOCK4;ENSG00000128512|ENST00000428084|DOCK4;nc|ENSG00000128512|Q8N1I0-2|DOCK4	nc|ENSG00000128512|Q8N1I0|DOCK4	nc|ENSG00000128512|Q8N1I0|DOCK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	600.3335571289062	2	600.332216	1198.64988	0.84167	0.00050528	2.15	0.0012907	2.9917	0.001796	600.3333552176359	94.081	3.1031	94.242	93.043	96.146	0.16119					126	74	2	0	0	0	0.78058	1	9653	9653		30.504	2.6214	1	621100			8561	3544	6021	6027	9841	9841					0.05849997639643334
FFLVPAKLIS	10	Unmodified	_FFLVPAKLIS_					0	0	0			REV__nc|ENSG00000125257|O15439-4|ABCC4	REV__nc|ENSG00000125257|O15439-4|ABCC4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3299560546875	2	567.84971	1133.68487	0.49021	0.00027836	1.9102	0.0010847	2.4004	0.0013631	567.8490143884073	92.373	0.21211	92.594	92.446	92.658	0.22157					7	4	2	0	0	0	0.37624	1	9328	9328		15.642	5.055	1	93704	+		8562	18632	6022	6028	9842	9842					0.12337240447595832
FFLWTLAY	8	Unmodified	_FFLWTLAY_					0	0	0			REV__ENSG00000162728|ENST00000368088|KCNJ9	REV__ENSG00000162728|ENST00000368088|KCNJ9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7788696289062	2	530.778754	1059.54295	0.54385	0.00028866	-0.21615	-0.00011473	0.3277	0.00017394	530.7785064746369	56.876	1.1282	57.431	57.181	58.309	0.55513					49	27	3	0	0	0	0.73619	1	5892	5892		65.897	11.133	1	3022800	+		8563	20840	6023	6029	9843	9843					0.015564474252641958
FFMGKVAL	8	Unmodified	_FFMGKVAL_					0	0	0		ENSG00000256053|ENST00000409074|COA8;nc|ENSG00000256053|Q96IL0|COA8	ENSG00000256053|ENST00000409074|COA8	ENSG00000256053|ENST00000409074|COA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7554931640625	2	456.754224	911.493896	-0.064177	-2.9313E-05	3.2396	0.0014797	3.1754	0.0014504	456.75543897284	72.478	0.82823	73.028	72.647	73.476	0.55008					52	19	4	0	0	0	0.88915	1	8121	8121		35.201	4.6971	1	663940			8564	8892	6024	6030	9844	9844					0.03460835864666478
FFMLLGSL	8	Unmodified	_FFMLLGSL_					0	0	0		nc|ENSG00000141873|Q9BRY0-2|SLC39A3;ENSG00000141873|ENST00000269740|SLC39A3	nc|ENSG00000141873|Q9BRY0-2|SLC39A3	nc|ENSG00000141873|Q9BRY0-2|SLC39A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.25347900390625	2	464.254057	926.493561	-1.467	-0.00068104	1.2482	0.00057946	-0.21881	-0.00010158	464.25450213652135	80.516	0.77847	80.621	80.13	80.909	0.10526					59	23	4	0	0	0	0.86288	1	7633	7633		26.796	0	1	320700			8565	14966	6025	6031	9845	9845					0.027374161448392442
FFNFVFLL	8	Unmodified	_FFNFVFLL_					0	0	0			REV__ENSG00000110900|ENST00000546076|TSPAN11	REV__ENSG00000110900|ENST00000546076|TSPAN11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3153076171875	2	523.789121	1045.56369	-0.27048	-0.00014168	1.9448	0.0010187	1.6743	0.000877	523.7901035924725	38.863	0.72323	39.205	38.98	39.703	0.34187					29	16	3	0	0	0	0.4196	1	3239	3239		33.516	0	1	159370	+		8566	17839	6026	6032	9846	9846					0.04273037804955493
FFPWRAGSI	9	Unmodified	_FFPWRAGSI_					0	0	0			REV__ENST00000466429.5_1_6:56323805-56328761:-|nuORF	REV__ENST00000466429.5_1_6:56323805-56328761:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.7819213867188	2	540.784902	1079.55525	-1.5179	-0.00082084	-2.2694	-0.0012273	-3.7873	-0.0020481	540.7835763653392	58.123	0.81571	58.517	58.043	58.859	0.39407					35	19	2	0	0	0	0.58151	1	6082	6082		47.916	5.4411	1	439060	+		8567	27129	6027	6033	9847	9847					0.018654838883321645
FFQWCGEL	8	Carbamidomethyl (C)	_FFQWC(Carbamidomethyl (C))GEL_	FFQWC(1)GEL		FFQWC(80)GEL		0	1	0			REV__ENST00000296550.11_1_4:151178265-151178463:+|nuORF	REV__ENST00000296550.11_1_4:151178265-151178463:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.7383422851562	2	543.739302	1085.46405	0.98262	0.00053429	-2.5184	-0.0013694	-1.5358	-0.00083508	543.7378454699299	27.661	0.70065	27.407	27.152	27.853	-0.25465					34	15	3	0	0	0	0.41376	1	1622	1622		79.939	7.06	1	827510	+		8568	24716	6028	6034	9848	9848	304				-0.07526147871317335
FFRIDKILR	9	Unmodified	_FFRIDKILR_					0	0	0			REV__ENSG00000136051|ENST00000332180|WASHC4	REV__ENSG00000136051|ENST00000332180|WASHC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.36669921875	2	604.369133	1206.72371	-1.2751	-0.0007706	-3.1235	-0.0018878	-4.3986	-0.0026584	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.78983	1	11290	11290		27.882	3.3631	1	103250000	+		8569	19283	6029	6035	9849	9849					0.12861965801971564
FFRKRGKYPHR	11	Unmodified	_FFRKRGKYPHR_					0	0	0		ENST00000311549.10_1_13:27825489-27827914:+|nuORF	ENST00000311549.10_1_13:27825489-27827914:+|nuORF	ENST00000311549.10_1_13:27825489-27827914:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.9519348144531	3	497.952983	1490.83712	-0.26391	-0.00013141	-3.1471	-0.0015671	-3.411	-0.0016985	497.9513595269569	17.389	0.40384	17.31	17.13	17.534	-0.079056					39	17	3	0	0	0	0.77205	1	204	204		17.167	2.4731	1	123420			8570	9929	6030	6036	9850	9850					0.11133453967750029
FFRLLSRRLMF	11	Unmodified	_FFRLLSRRLMF_					0	0	0		ENST00000523151.5_1_8:130364907-130382560:-|nuORF	ENST00000523151.5_1_8:130364907-130382560:-|nuORF	ENST00000523151.5_1_8:130364907-130382560:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	495.958740234375	3	495.955225	1484.84384	2.8497	0.0014133	4.1061	0.0020365	6.9559	0.0034498	495.95718609961506	102.66	1.5398	102.61	101.62	103.16	-0.046997					94	36	4	0	0	0	0.76892	1	11233	11233		17.833	3.7471	1	382330			8571	13198	6031	6037	9851	9851					0.12081630804095767
FFRNKILVI	9	Unmodified	_FFRNKILVI_					0	0	0		ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	576.2889404296875	2	575.360776	1148.707	-0.44538	-0.00025625	2.4199	0.0013923	1.9745	0.0011361	575.362435611835	68.78	0.55999	68.744	68.434	68.994	-0.036301					28	18	2	0	0	0	0.20789	1	6663	6663		19.36	1.0356	1	61543			8572	2240	6032	6038	9852	9852					0.13859464916049546
FFRNKILVI	9	Unmodified	_FFRNKILVI_					0	0	0		ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	575.360776	1148.707	-1.0083	-0.00058014	5.1607	0.0029693	4.1524	0.0023891	575.3628795738119	68.639	0.58932	68.66	68.354	68.944	0.021599	0.018539	0.0030872	NaN	18.324	40	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92938			8573	2240	6032	6038							0.13859464916049546
FFRNKILVI	9	Unmodified	_FFRNKILVI_					0	0	0		ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	575.360776	1148.707	0.58498	0.00033657	1.2536	0.00072127	1.8386	0.0010578	575.3617331587296	68.485	0.67047	68.613	68.279	68.95	0.12839	-0.028559	-0.0014089	NaN	18.324	40	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96772			8574	2240	6032	6038							0.13859464916049546
FFRNKILVI	9	Unmodified	_FFRNKILVI_					0	0	0		ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	575.360776	1148.707	-0.68666	-0.00039508	4.9033	0.0028212	4.2167	0.0024261	575.3619086764069	68.597	1.0402	68.656	68.395	69.435	0.059288	0.014403	0.002791	NaN	18.324	80	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108960			8575	2240	6032	6038							0.13859464916049546
FFRRTIRLKLV	11	Unmodified	_FFRRTIRLKLV_					0	0	0		ENSG00000186951|ENST00000407236|PPARA;nc|ENSG00000186951|Q07869-2|PPARA;ENST00000493286.1_1_22:46594271-46615974:+|nuORF	ENSG00000186951|ENST00000407236|PPARA	ENSG00000186951|ENST00000407236|PPARA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.6470947265625	3	483.645267	1447.91397	-0.25795	-0.00012476	2.8039	0.0013561	2.546	0.0012314	483.6464782626143	48.15	2.9849	48.057	47.534	50.519	-0.093178					204	77	5	0	0	0	0.79716	1	3629	3629		11.932	5.6115	1	2128000			8576	7830	6033	6039	9853	9853					0.2079325246420467
FFSCGSSKY	9	Unmodified	_FFSCGSSKY_					0	0	0		ENST00000471538.1_1_1:16200459-16203174:+|nuORF	ENST00000471538.1_1_1:16200459-16203174:+|nuORF	ENST00000471538.1_1_1:16200459-16203174:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.2252807617188	2	513.223485	1024.43242	0.21385	0.00010975	3.0714	0.0015763	3.2852	0.0016861	513.2248927551661	78.988	1.1471	79.398	78.887	80.034	0.41059					63	26	3	0	0	0	0.28875	1	9042	9042		65.803	2.4969	1	479690			8577	12244	6034	6040	9854	9854					-0.07882140625247303
FFSDFGLMWY	10	Unmodified	_FFSDFGLMWY_					0	0	0		ENSG00000160505|ENST00000301295|NLRP4	ENSG00000160505|ENST00000301295|NLRP4	ENSG00000160505|ENST00000301295|NLRP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.56915283203125	3	438.195087	1311.56343	0.35215	0.00015431	4.306	0.0018869	4.6582	0.0020412	438.196953321113	33.934	0.78475	34.144	33.861	34.646	0.21002					20	18	2	0	0	0	0.37624	1	2525	2525		21.686	12.886	1	146740			8578	5591	6035	6041	9855	9855					-0.07988749977221232
FFSDFGLMWY	10	Unmodified	_FFSDFGLMWY_					0	0	0		ENSG00000160505|ENST00000301295|NLRP4	ENSG00000160505|ENST00000301295|NLRP4	ENSG00000160505|ENST00000301295|NLRP4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	438.195087	1311.56343	1.338	0.0005863	3.475	0.0015227	4.813	0.002109	438.1965727013361	33.923	0.4126	34.228	33.994	34.406	0.30495	0.041849	-0.00044805	NaN	21.686	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162840			8579	5591	6035	6041							-0.07988749977221232
FFSPVGAAKY	10	Unmodified	_FFSPVGAAKY_					0	0	0			REV__ENST00000261489.6_2_13:45010747-45010900:-|nuORF	REV__ENST00000261489.6_2_13:45010747-45010900:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.7802734375	2	543.784567	1085.55458	-0.9073	-0.00049338	-3.8929	-0.0021169	-4.8002	-0.0026103	543.7821288685951	32.032	0.89849	32.158	31.604	32.503	0.12643					50	20	3	0	0	0	0.80179	1	2212	2212		39.253	4.1008	1	344460	+		8580	24392	6036	6042	9856	9856					0.015226444486188484
FFSVLYTVI	9	Unmodified	_FFSVLYTVI_					0	0	0		ENSG00000176281|ENST00000315915|OR4K5	ENSG00000176281|ENST00000315915|OR4K5	ENSG00000176281|ENST00000315915|OR4K5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.8062133789062	2	544.804968	1087.59538	0.89236	0.00048616	2.3861	0.0013	3.2785	0.0017861	544.8060221408508	25.027	0.54818	24.99	24.754	25.302	-0.037178					22	12	2	0	0	0	0.77546	1	978	978		31.955	0.42505	1	67634			8581	7070	6037	6043	9857	9857					0.05508985768233288
FFTAHSQP	8	Unmodified	_FFTAHSQP_					0	0	0		ENST00000374358.4_1_1:25687202-25687394:+|nuORF	ENST00000374358.4_1_1:25687202-25687394:+|nuORF	ENST00000374358.4_1_1:25687202-25687394:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7257995605469	2	467.72451	933.434466	-0.18744	-8.7671E-05	2.4618	0.0011515	2.2744	0.0010638	467.7254616013156	55.38	0.54032	55.949	55.658	56.198	0.56836					29	12	4	0	0	0	0.884	1	5686	5686		33.516	1.5607	1	690290			8582	10777	6038	6044	9858	9858					-0.03491343825135118
FFTGDVFGY	9	Unmodified	_FFTGDVFGY_					0	0	0		nc|ENSG00000142230|Q9UBE0-2|SAE1;nc|ENSG00000142230|Q9UBE0-3|SAE1;ENSG00000142230|ENST00000270225|SAE1	nc|ENSG00000142230|Q9UBE0-2|SAE1	nc|ENSG00000142230|Q9UBE0-2|SAE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.7399291992188	2	526.739825	1051.4651	-0.35136	-0.00018507	-2.7892	-0.0014692	-3.1405	-0.0016542	526.7381055062634	70.276	0.40034	70.239	70.075	70.475	-0.037865					29	21	2	0	0	0	0.5393	1	6823	6823		50.025	4.0726	1	185920			8583	4552	6039	6045	9859	9859					-0.058576102307597466
FFVDQREKI	9	Unmodified	_FFVDQREKI_					0	0	0			REV__ENSG00000188735|ENST00000449592|TMEM120B	REV__ENSG00000188735|ENST00000449592|TMEM120B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	591.3182983398438	2	591.319306	1180.62406	-0.76242	-0.00045083	1.5821	0.00093551	0.81965	0.00048468	591.3202759040194	67.03	0.67344	67.03	66.818	67.491	0					58	33	2	0	0	0	0.73802	1	5924	5924		37.812	6.2817	1	136820	+		8584	23024	6040	6046	9860	9860					0.040971033973846716
FFVIFIKHL	9	Unmodified	_FFVIFIKHL_					0	0	0		ENSG00000112796|ENST00000371383|ENPP5	ENSG00000112796|ENST00000371383|ENPP5	ENSG00000112796|ENST00000371383|ENPP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3546142578125	2	582.35242	1162.69029	0.15817	9.2113E-05	1.6245	0.00094601	1.7826	0.0010381	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.76996	1	11593	11593		33.516	0	1	78004000			8585	2682	6041	6047	9861	9861					0.11544964030076699
FFVLKSFFS	9	Unmodified	_FFVLKSFFS_					0	0	0		ENSG00000114204|ENST00000264677|SERPINI2	ENSG00000114204|ENST00000264677|SERPINI2	ENSG00000114204|ENST00000264677|SERPINI2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3126220703125	2	561.305136	1120.59572	2.6138	0.0014672	-2.2533	-0.0012648	0.36055	0.00020238	561.3036643100244	110.26	0.95476	110.32	110.14	111.09	0.054062					42	33	2	0	0	0	0.58151	1	13361	13361		47.916	5.5195	1	238570			8586	2763	6042	6048	9862	9862					0.04024405488098637
FFVVVVLFF	9	Unmodified	_FFVVVVLFF_					0	0	0		ENST00000459993.5_1_3:56655037-56655307:-|nuORF	ENST00000459993.5_1_3:56655037-56655307:-|nuORF	ENST00000459993.5_1_3:56655037-56655307:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.8280639648438	2	558.828246	1115.64194	0.54226	0.00030303	-1.7917	-0.0010012	-1.2494	-0.0006982	558.8270788405256	65.54	0.60555	65.665	65.338	65.944	0.12532					65	32	3	0	0	0	0.72098	1	5834	5834		39.021	5.0999	1	2467400			8587	11999	6043	6049	9863	9863					0.0887447039019662
FFWLSPLASLV	11	Unmodified	_FFWLSPLASLV_					0	0	0		ENSG00000146833|ENST00000349062|TRIM4;nc|ENSG00000146833|Q9C037|TRIM4	ENSG00000146833|ENST00000349062|TRIM4	ENSG00000146833|ENST00000349062|TRIM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3610229492188	2	640.357899	1278.70125	1.5852	0.0010151	-0.19514	-0.00012496	1.3901	0.00089016	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.75921	1	10469	10469		19.997	0.89325	1	616450			8588	4861	6044	6050	9864	9864					0.0730432161369663
FFYYHQYYHQY	11	Unmodified	_FFYYHQYYHQY_					0	0	0			REV__ENST00000510376.1_1_5:176332285-176333139:-|nuORF	REV__ENST00000510376.1_1_5:176332285-176333139:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.2466430664062	3	553.573614	1657.69901	0.18267	0.00010112	2.5224	0.0013963	2.7051	0.0014974	553.5751094272198	54.497	0.29835	54.524	54.384	54.682	0.027138					13	11	2	0	0	0	0.18318	1	4866	4866		6.001	2.382	1	98887	+		8589	27952	6045	6051	9865	9865					-0.103527588620409
FGAGLGGNVK	10	Unmodified	_FGAGLGGNVK_					0	0	0		ENSG00000262152|ENST00000573315|GREP1	ENSG00000262152|ENST00000573315|GREP1	ENSG00000262152|ENST00000573315|GREP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.2533264160156	2	460.253434	918.492316	-1.2344	-0.00056815	1.4871	0.00068444	0.25266	0.00011629	460.25402878682394	48.567	1.4555	49.037	48.668	50.124	0.46941					62	35	3	0	0	0	0.37206	2	4699	4687;4699		66.429	5.4573	1	1498600			8590	8931	6046	6052	9866;9867	9867					0.029809181002974583
FGAGPGAG	8	Unmodified	_FGAGPGAG_					0	0	0			REV__ENST00000337979.8_1_11:59522641-59522929:+|nuORF	REV__ENST00000337979.8_1_11:59522641-59522929:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.2967529296875	1	633.299101	632.291825	-0.34024	-0.00021547	-3.6373	-0.0023035	-3.9775	-0.0025189	633.2967197493147	63.862	2.6331	63.889	62.845	65.478	0.027138					144	98	2	0	0	0	0.85228	1	6034	6034		10.185	0	1	219330	+		8591	25211	6047	6053	9868	9868					-0.03902931496520523
FGALRRGG	8	Unmodified	_FGALRRGG_					0	0	0			REV__ENST00000260970.7_1_2:170440858-170460586:+|nuORF	REV__ENST00000260970.7_1_2:170440858-170460586:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.2395935058594	2	417.240661	832.46677	-1.1717	-0.00048886	-2.9703	-0.0012393	-4.1419	-0.0017282	417.23924184101116	88.678	1.8374	88.678	88.117	89.954	0					78	42	3	0	0	0	0.87276	1	8553	8553		29.842	0.69198	1	977120	+		8592	24374	6048	6054	9869	9869					0.04383488368523558
FGALRRGG	8	Unmodified	_FGALRRGG_					0	0	0			REV__ENST00000260970.7_1_2:170440858-170460586:+|nuORF	REV__ENST00000260970.7_1_2:170440858-170460586:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.2398986816406	2	417.240661	832.46677	-0.18702	-7.8031E-05	-3.5124	-0.0014655	-3.6994	-0.0015435	417.23903257482436	88.499	3.1931	88.567	87.962	91.155	0.068161					142	75	3	0	0	0	0.87276	1	8983	8983		29.842	3.1486	1	1475100	+		8593	24374	6048	6054	9870	9870					0.04383488368523558
FGALRRGG	8	Unmodified	_FGALRRGG_					0	0	0			REV__ENST00000260970.7_1_2:170440858-170460586:+|nuORF	REV__ENST00000260970.7_1_2:170440858-170460586:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2395935058594	2	417.240661	832.46677	0.62219	0.00025961	-3.1995	-0.0013349	-2.5773	-0.0010753	417.23868874141215	88.354	2.9102	88.504	86.614	89.525	0.15055					153	68	4	0	0	0	0.86791	2	8771	8771;8795		29.842	5.2118	1	1138800	+		8594	24374	6048	6054	9871;9872	9871					0.04383488368523558
FGALRRGG	8	Unmodified	_FGALRRGG_					0	0	0			REV__ENST00000260970.7_1_2:170440858-170460586:+|nuORF	REV__ENST00000260970.7_1_2:170440858-170460586:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.24114990234375	2	417.240661	832.46677	-1.05	-0.00043811	-2.558	-0.0010673	-3.6081	-0.0015054	417.2394458180228	88.189	1.3218	88.652	88.27	89.592	0.46312					60	32	3	0	0	0	0.87276	1	10448	10448		29.842	3.1486	1	1050800	+		8595	24374	6048	6054	9873	9873					0.04383488368523558
FGAPRQAY	8	Unmodified	_FGAPRQAY_					0	0	0			REV__ENSG00000129474|ENST00000262713|AJUBA	REV__ENSG00000129474|ENST00000262713|AJUBA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.26617431640625	2	455.232502	908.450451	-0.3231	-0.00014708	-4.059	-0.0018478	-4.3821	-0.0019949	455.2304181213334	24.816	0.46639	24.77	24.551	25.018	-0.04598					20	10	3	0	0	0	0.4196	1	997	997		20.482	10.217	1	25838	+		8596	18822	6049	6055	9874	9874					-0.0074363758824347315
FGAPRQAY	8	Unmodified	_FGAPRQAY_					0	0	0			REV__ENSG00000129474|ENST00000262713|AJUBA	REV__ENSG00000129474|ENST00000262713|AJUBA	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	455.232502	908.450451	-2.0947	-0.00095357	-2.0355	-0.00092661	-4.1302	-0.0018802	455.2313766615593	24.745	0.43346	24.745	24.549	24.983	0	0.062016	0.0011903	NaN	20.482	27	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45555	+		8597	18822	6049	6055							-0.0074363758824347315
FGARSRAHAP	10	Unmodified	_FGARSRAHAP_					0	0	0		ENSG00000235194|ENST00000452015|PPP1R3E	ENSG00000235194|ENST00000452015|PPP1R3E	ENSG00000235194|ENST00000452015|PPP1R3E	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	535.8155517578125	2	535.286131	1068.55771	1.2443	0.00066608	-1.1308	-0.0006053	0.11353	6.0772E-05	535.2855870712333	99.232	2.2372	99.28	98.498	100.74	0.047523					62	51	2	0	0	0	0.37624	1	10604	10604		19.997	8.9	1	209510			8598	8749	6050	6056	9875	9875					0.026173323459943276
FGCVYLLHLL	10	Unmodified	_FGCVYLLHLL_					0	0	0		ENST00000451963.1_2_7:99818153-99818871:+|nuORF;ENSG00000213413|ENST00000699088|PVRIG;nc|ENSG00000213413|Q6DKI7|PVRIG	ENST00000451963.1_2_7:99818153-99818871:+|nuORF	ENST00000451963.1_2_7:99818153-99818871:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3424072265625	2	589.325545	1176.63654	0.80903	0.00047678	1.3198	0.00077782	2.1289	0.0012546	589.3273293219365	92.772	0.16121	92.998	92.915	93.077	0.22547					5	3	2	0	0	0	0.37624	1	9395	9395		26.796	0	1	31329			8599	8589	6051	6057	9876	9876					0.055284235360659295
FGDIVFLIKR	10	Unmodified	_FGDIVFLIKR_					0	0	0			REV__nc|ENSG00000022556|Q9NX02-3|NLRP2	REV__nc|ENSG00000022556|Q9NX02-3|NLRP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3662109375	2	604.363516	1206.71248	3.6458	0.0022034	1.558	0.00094162	5.2038	0.003145	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.86621	1	12841	12841		27.882	6.9353	1	5883900	+		8600	16243	6052	6058	9877	9877					0.11739143707836774
FGEVVLLV	8	Unmodified	_FGEVVLLV_					0	0	0		nc|ENSG00000138759|Q86XX4|FRAS1;ENSG00000138759|ENST00000512123|FRAS1;nc|ENSG00000138759|Q86XX4-5|FRAS1	nc|ENSG00000138759|Q86XX4|FRAS1	nc|ENSG00000138759|Q86XX4|FRAS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2632751464844	2	438.265479	874.516405	-1.9277	-0.00084486	-2.8186	-0.0012353	-4.7463	-0.0020801	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.86791	1	2377	2377		28.254	0	1	3507500			8601	4327	6053	6059	9878	9878					0.07412758533951092
FGFENFQR	8	Unmodified	_FGFENFQR_					0	0	0		nc|ENSG00000071909|Q8WXR4-5|MYO3B;ENST00000438642.6_1_2:171034716-171400468:+|nuORF;nc|ENSG00000071909|Q8WXR4-6|MYO3B;ENST00000409940.6_1_2:171034716-171376051:+|nuORF;nc|ENSG00000071909|Q8WXR4-3|MYO3B;nc|ENSG00000071909|Q8WXR4-2|MYO3B;nc|ENSG00000071909|Q8WXR4-4|MYO3B;ENSG00000071909|ENST00000408978|MYO3B;nc|ENSG00000071909|Q8WXR4-7|MYO3B;ENST00000602629.1_1_2:171225816-171400468:+|nuORF	nc|ENSG00000071909|Q8WXR4-5|MYO3B	nc|ENSG00000071909|Q8WXR4-5|MYO3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3032836914062	2	522.748516	1043.48248	-0.66583	-0.00034806	-0.50635	-0.00026469	-1.1722	-0.00061275	522.7478683530222	86.966	1.1075	87.42	86.695	87.803	0.45429					38	26	2	0	0	0	0.4196	1	10206	10206		40.778	18.818	1	270430			8602	11754	6054	6060	9879	9879					-0.03752269905112371
FGFIPKVN	8	Unmodified	_FGFIPKVN_					0	0	0		ENST00000296632.7_1_5:110835314-110835452:-|nuORF	ENST00000296632.7_1_5:110835314-110835452:-|nuORF	ENST00000296632.7_1_5:110835314-110835452:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	461.2650146484375	2	461.263271	920.511988	0.65042	0.00030002	3.2292	0.0014895	3.8797	0.0017896	461.2645901499701	92.955	1.6766	93.001	92.496	94.172	0.045448					111	39	4	0	0	0	0.85277	1	9752	9752		25.45	4.9683	1	1185800			8603	9746	6055	6061	9880	9880					0.04855294111030162
FGFRLGGSG	9	Unmodified	_FGFRLGGSG_					0	0	0		ENSG00000215045|ENST00000457091|GRID2IP	ENSG00000215045|ENST00000457091|GRID2IP	ENSG00000215045|ENST00000457091|GRID2IP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.9427185058594	2	449.232502	896.450451	-1.5369	-0.00069042	-2.5294	-0.0011363	-4.0663	-0.0018267	449.2313820960993	81.155	1.9808	81.27	80.288	82.269	0.11426					104	49	3	0	0	0	0.20789	1	7598	7598		5.9211	0	1	69826			8604	8646	6056	6062	9881	9881					-0.0019163758822742238
FGGPSDII	8	Unmodified	_FGGPSDII_					0	0	0		ENSG00000183476|ENST00000328828|SH2D7	ENSG00000183476|ENST00000328828|SH2D7	ENSG00000183476|ENST00000328828|SH2D7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.20867919921875	2	403.208161	804.401769	1.1408	0.00046	0.67566	0.00027243	1.8165	0.00073243	403.208345572438	85.63	1.9726	86.071	85.621	87.594	0.44144					91	47	3	0	0	0	0.82464	1	9993	9993		21.702	0	1	1218200			8605	7534	6057	6063	9882	9882					-0.008255509480022738
FGGPTRRRLV	10	Unmodified	_FGGPTRRRLV_					0	0	0			REV__ENST00000461142.3_1_1:1198606-1209210:-|nuORF	REV__ENST00000461142.3_1_1:1198606-1209210:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.8440551757812	2	579.846356	1157.67816	0.46014	0.00026681	-4.4113	-0.0025579	-3.9511	-0.0022911	579.8436677237017	102.22	1.1397	102.27	101.85	102.99	0.043198					70	27	3	0	0	0	0.86718	1	11019	11019		27.882	2.3082	1	1168900	+		8606	27021	6058	6064	9883	9883					0.10562740339605625
FGGRLRLG	8	Unmodified	_FGGRLRLG_					0	0	0			REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2633056640625	2	438.264136	874.51372	-1.9277	-0.00084486	0.24503	0.00010739	-1.6827	-0.00073747	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.86288	1	2186	2186		26.796	1.3459	1	3507500	+		8607	26732	6059	6065	9884	9884					0.07144347919654592
FGGRLRLG	8	Unmodified	_FGGRLRLG_					0	0	0			REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.262939453125	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.884	1	2804	2804		33.516	6.7195	1	3384400	+		8608	26732	6059	6065	9885	9885					0.07144347919654592
FGGRLRLG	8	Unmodified	_FGGRLRLG_					0	0	0			REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26318359375	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.86288	2	2624	2580;2624		44.531	7.5026	1	3673500	+		8609	26732	6059	6065	9886;9887	9887					0.07144347919654592
FGGRLRLG	8	Unmodified	_FGGRLRLG_					0	0	0			REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2630615234375	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.93529	1	3203	3203		52.299	15.271	1	4268300	+		8610	26732	6059	6065	9888	9888					0.07144347919654592
FGGRLRLG	8	Unmodified	_FGGRLRLG_					0	0	0			REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.263427734375	2	438.264136	874.51372	-1.5833	-0.00069392	-0.15448	-6.7702E-05	-1.7378	-0.00076162	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.88915	1	1915	1915		35.201	1.6851	1	11160000	+		8611	26732	6059	6065	9889	9889					0.07144347919654592
FGGRLRLG	8	Unmodified	_FGGRLRLG_					0	0	0			REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2634582519531	2	438.264136	874.51372	0.15263	6.689E-05	-1.9074	-0.00083592	-1.7547	-0.00076903	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.86288	4	1953	1828;1839;1924;1953		52.299	9.903	1	11370000	+		8612	26732	6059	6065	9890;9891;9892;9893	9893					0.07144347919654592
FGGRLRLG	8	Unmodified	_FGGRLRLG_					0	0	0			REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2628479003906	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.88915	1	2557	2557		35.201	1.0282	1	22029000	+		8613	26732	6059	6065	9894	9894					0.07144347919654592
FGGRLRLG	8	Unmodified	_FGGRLRLG_					0	0	0			REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2635498046875	2	438.264136	874.51372	0.037237	1.632E-05	-1.83	-0.00080201	-1.7927	-0.00078569	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.86288	2	2026	1920;2026		35.201	1.6851	1	10667000	+		8614	26732	6059	6065	9895;9896	9896					0.07144347919654592
FGGRLRLG	8	Unmodified	_FGGRLRLG_					0	0	0			REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2633972167969	2	438.264136	874.51372	0.27759	0.00012166	-2.5692	-0.001126	-2.2916	-0.0010043	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.86288	1	2749	2749		26.796	6.3143	1	85249000	+		8615	26732	6059	6065	9897	9897					0.07144347919654592
FGGRLRLG	8	Unmodified	_FGGRLRLG_					0	0	0			REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2615051269531	2	438.264136	874.51372	-2.4769	-0.0010856	-1.2978	-0.00056879	-3.7748	-0.0016543	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.91005	3	3517	3517;3529;3601		42.474	7.2737	1	246320000	+		8616	26732	6059	6065	9898;9899;9900	9898					0.07144347919654592
FGGRLRLG	8	Unmodified	_FGGRLRLG_					0	0	0			REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	REV__ENST00000439742.6_1_5:176738900-176739071:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.26141357421875	2	438.264136	874.51372	-1.2747	-0.00055866	-2.1943	-0.00096169	-3.469	-0.0015203	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.86288	1	3589	3589		26.796	4.8362	1	219150000	+		8617	26732	6059	6065	9901	9901					0.07144347919654592
FGGSAVLR	8	Unmodified	_FGGSAVLR_					0	0	0			REV__ENSG00000170209|ENST00000303941|ANKK1	REV__ENSG00000170209|ENST00000303941|ANKK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.7308044433594	2	403.729595	805.444637	2.7323	0.0011031	-0.40392	-0.00016307	2.3284	0.00094003	403.72925673314853	99.693	1.4907	100.03	99.108	100.6	0.33294					77	37	3	0	0	0	0.84341	1	12031	12031		24.203	2.5004	1	609450	+		8618	21635	6060	6066	9902	9902					0.034132639000858944
FGGTVHKK	8	Unmodified	_FGGTVHKK_					0	0	0		ENSG00000163655|ENST00000496455|GMPS;nc|ENSG00000163655|P49915-2|GMPS	ENSG00000163655|ENST00000496455|GMPS	ENSG00000163655|ENST00000496455|GMPS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2510986328125	2	437.250695	872.486836	0.31183	0.00013635	-0.13925	-6.0889E-05	0.17258	7.546E-05	437.25057889742067	17.58	0.38145	17.097	16.944	17.326	-0.48256					16	8	3	0	0	0	0.93293	1	276	276		51.335	5.3835	1	63119			8619	5848	6061	6067	9903	9903					0.045492393084600735
FGGTVHKK	8	Unmodified	_FGGTVHKK_					0	0	0		ENSG00000163655|ENST00000496455|GMPS;nc|ENSG00000163655|P49915-2|GMPS	ENSG00000163655|ENST00000496455|GMPS	ENSG00000163655|ENST00000496455|GMPS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2510681152344	2	437.250695	872.486836	0.49981	0.00021854	-0.40348	-0.00017642	0.096321	4.2116E-05	437.2503165533279	17.7	0.38976	17.079	16.919	17.308	-0.62141					16	10	2	0	0	0	0.83456	1	294	294		60.972	9.6365	1	96294			8620	5848	6061	6067	9904	9904					0.045492393084600735
FGIDPIWSL	9	Unmodified	_FGIDPIWSL_					0	0	0		ENST00000533005.5_1_11:67811756-67818283:+|nuORF;nc|ENSG00000110719|Q13488-2|TCIRG1;ENSG00000110719|ENST00000265686|TCIRG1	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2767333984375	2	524.279118	1046.54368	3.6548	0.0019161	-4.0897	-0.0021441	-0.43491	-0.00022801	524.2768336682234	104.21	0.64127	104.43	104.2	104.84	0.2268					26	14	2	0	0	0	0.38563	2	12725	12725;12737		58.782	7.5893	1	273030			8621	2537	6062	6068	9905;9906	9905					0.022272420743320254
FGIDRPAEL	9	Unmodified	_FGIDRPAEL_					0	0	0		ENST00000592188.1_1_19:19387459-19391209:-|nuORF;ENST00000589144.5_1_19:19387459-19413207:-|nuORF;ENST00000588731.6_1_19:19387459-19414804:-|nuORF;ENSG00000105705|ENST00000247001|SUGP1	ENST00000592188.1_1_19:19387459-19391209:-|nuORF	ENST00000592188.1_1_19:19387459-19391209:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2718200683594	2	509.271824	1016.5291	-0.75812	-0.00038609	0.62077	0.00031614	-0.13735	-6.9951E-05	509.27204150763566	57.137	1.8689	57.533	57.159	59.028	0.39564					82	45	4	0	0	0	0.0062975	5	5935	5902;5912;5923;5935;5947		136.27	38.919	1	4573700			8622	2244	6063	6069	9907;9908;9909;9910;9911	9910					0.02149169926178729
FGIDRPAEL	9	Unmodified	_FGIDRPAEL_					0	0	0		ENST00000592188.1_1_19:19387459-19391209:-|nuORF;ENST00000589144.5_1_19:19387459-19413207:-|nuORF;ENST00000588731.6_1_19:19387459-19414804:-|nuORF;ENSG00000105705|ENST00000247001|SUGP1	ENST00000592188.1_1_19:19387459-19391209:-|nuORF	ENST00000592188.1_1_19:19387459-19391209:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2716064453125	2	509.271824	1016.5291	1.2166	0.0006196	-1.402	-0.00071402	-0.1854	-9.442E-05	509.2709889871739	57.038	2.0766	57.593	57.225	59.302	0.55512					82	50	4	0	0	0	2.0213E-05	4	5916	5905;5916;5928;5941		154.12	51.151	1	5111900			8623	2244	6063	6069	9912;9913;9914;9915	9913					0.02149169926178729
FGIPAHYV	8	Unmodified	_FGIPAHYV_					0	0	0		nc|ENSG00000112183|Q9BX46-5|RBM24;nc|ENSG00000112183|Q9BX46-2|RBM24;ENSG00000112183|ENST00000379052|RBM24	nc|ENSG00000112183|Q9BX46-5|RBM24	nc|ENSG00000112183|Q9BX46-5|RBM24	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9432067871094	2	452.239796	902.465038	-1.651	-0.00074663	-1.3502	-0.00061059	-3.0011	-0.0013572	452.2390735269934	55.793	1.0904	55.793	55.238	56.328	0					49	32	2	0	0	0	0.4196	1	4718	4718		24.504	0	1	118920			8624	2638	6064	6070	9916	9916					0.009904345598897635
FGIPLRPN	8	Unmodified	_FGIPLRPN_					0	0	0		ENST00000590416.1_1_19:34712331-34717333:+|nuORF;nc|ENSG00000257103|Q8ND56-3|LSM14A;nc|ENSG00000257103|Q8ND56|LSM14A;ENSG00000257103|ENST00000544216|LSM14A	ENST00000590416.1_1_19:34712331-34717333:+|nuORF	ENST00000590416.1_1_19:34712331-34717333:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2634582519531	2	457.266345	912.518136	-1.2409	-0.00056743	-3.1044	-0.0014196	-4.3454	-0.001987	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.86288	1	8010	8010		26.796	1.3459	1	2957200			8625	8904	6065	6071	9917	9917					0.05837812342565485
FGIRGIGP	8	Unmodified	_FGIRGIGP_					0	0	0			REV__ENSG00000139218|ENST00000369367|SCAF11	REV__ENSG00000139218|ENST00000369367|SCAF11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.739501953125	2	408.739963	815.465373	-1.0833	-0.00044277	0.59228	0.00024209	-0.49098	-0.00020068	408.74010288341543	37.409	2.2746	37.356	36.961	39.236	-0.053558					112	51	3	0	0	0	0.86791	1	2610	2610		28.254	0	1	289290	+		8626	19525	6066	6072	9918	9918					0.050258542797678274
FGIRGIGP	8	Unmodified	_FGIRGIGP_					0	0	0			REV__ENSG00000139218|ENST00000369367|SCAF11	REV__ENSG00000139218|ENST00000369367|SCAF11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.7394714355469	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.89457	1	1907	1907		37.028	0	1	1364200	+		8627	19525	6066	6072	9919	9919					0.050258542797678274
FGIRGIGP	8	Unmodified	_FGIRGIGP_					0	0	0			REV__ENSG00000139218|ENST00000369367|SCAF11	REV__ENSG00000139218|ENST00000369367|SCAF11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.73944091796875	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.9159	1	1944	1944		44.531	7.5026	1	1654100	+		8628	19525	6066	6072	9920	9920					0.050258542797678274
FGIRKRAR	8	Unmodified	_FGIRKRAR_					0	0	0			REV__nc|ENSG00000186318|P56817-6|BACE1	REV__nc|ENSG00000186318|P56817-6|BACE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.7859191894531	2	502.317235	1002.61992	-0.95832	-0.00048138	1.3046	0.0006553	0.34623	0.00017392	502.3176888997999	43.982	0.45142	44.432	44.281	44.732	0.45024					17	10	2	0	0	0	0.4196	1	4049	4049		25.45	0	1	237480	+		8629	22843	6067	6073	9921	9921					0.11871103484986634
FGIVGVQLWA	10	Unmodified	_FGIVGVQLWA_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H;nc|ENSG00000006283|O43497-27|CACNA1G;nc|ENSG00000006283|O43497-15|CACNA1G;nc|ENSG00000006283|O43497-13|CACNA1G;nc|ENSG00000006283|O43497-6|CACNA1G;nc|ENSG00000006283|O43497-17|CACNA1G;nc|ENSG00000006283|O43497-11|CACNA1G;nc|ENSG00000006283|O43497-25|CACNA1G;nc|ENSG00000006283|O43497-21|CACNA1G;nc|ENSG00000006283|O43497-9|CACNA1G;nc|ENSG00000006283|O43497-8|CACNA1G;nc|ENSG00000006283|O43497-16|CACNA1G;nc|ENSG00000006283|O43497-7|CACNA1G;nc|ENSG00000006283|O43497-12|CACNA1G;nc|ENSG00000006283|O43497-33|CACNA1G;nc|ENSG00000006283|O43497-4|CACNA1G;nc|ENSG00000006283|O43497-20|CACNA1G;nc|ENSG00000006283|O43497-10|CACNA1G;nc|ENSG00000006283|O43497-34|CACNA1G;nc|ENSG00000006283|O43497-22|CACNA1G;nc|ENSG00000006283|O43497-2|CACNA1G;nc|ENSG00000006283|O43497-29|CACNA1G;nc|ENSG00000006283|O43497-30|CACNA1G;nc|ENSG00000006283|O43497-32|CACNA1G;nc|ENSG00000006283|O43497-31|CACNA1G;nc|ENSG00000006283|O43497-5|CACNA1G;nc|ENSG00000006283|O43497-19|CACNA1G;nc|ENSG00000006283|O43497-28|CACNA1G;nc|ENSG00000006283|O43497-18|CACNA1G;nc|ENSG00000006283|O43497-23|CACNA1G;nc|ENSG00000006283|O43497-26|CACNA1G;nc|ENSG00000006283|O43497-3|CACNA1G;nc|ENSG00000006283|O43497-36|CACNA1G;nc|ENSG00000006283|O43497-35|CACNA1G;nc|ENSG00000006283|O43497-24|CACNA1G;ENSG00000006283|ENST00000359106|CACNA1G	nc|ENSG00000196557|O95180-2|CACNA1H;nc|ENSG00000006283|O43497-27|CACNA1G	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.828369140625	2	545.30821	1088.60187	-0.33457	-0.00018245	-4.0681	-0.0022184	-4.4027	-0.0024008	545.3058361849286	60.29	0.48955	60.276	60.075	60.565	-0.013729					13	11	2	0	0	0	0.37624	1	5563	5563		37.159	5.6293	1	88457			8630	8074;697	6068	6074	9922	9922					0.06110923719620587
FGKCIVVSL	9	Unmodified	_FGKCIVVSL_					0	0	0			REV__ENST00000570036.5_1_16:84513521-84531159:-|nuORF	REV__ENST00000570036.5_1_16:84513521-84531159:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.27862548828125	2	483.278063	964.541574	-0.69726	-0.00033697	2.2408	0.0010829	1.5435	0.00074595	483.2791425455724	95.175	1.9923	95.222	94.662	96.654	0.046982					116	46	3	0	0	0	0.78536	1	10129	10129		29.15	2.3535	1	1260700	+		8631	19650	6069	6075	9923	9923					0.05788490064878715
FGKGLIKKCR	10	Unmodified	_FGKGLIKKCR_					0	0	0		nc|ENSG00000205560|Q92523-2|CPT1B;nc|ENSG00000205560|Q92523-4|CPT1B;nc|ENSG00000205560|Q92523-3|CPT1B;ENSG00000205560|ENST00000312108|CPT1B	nc|ENSG00000205560|Q92523-2|CPT1B	nc|ENSG00000205560|Q92523-2|CPT1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.3456420898438	2	575.349886	1148.68522	-1.0089	-0.00058045	-3.987	-0.0022939	-4.9958	-0.0028744	575.3486096870474	98.837	5.2928	98.887	98.351	103.64	0.04982					239	125	5	0	0	0	0.86763	1	10535	10535		26.693	0	1	4222200			8632	8532	6070	6076	9924	9924					0.11682336895796652
FGKGLLGSLGL	11	Unmodified	_FGKGLLGSLGL_					0	0	0			REV__ENST00000354416.7_1_X:118751886-118752201:-|nuORF	REV__ENST00000354416.7_1_X:118751886-118752201:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.3189697265625	2	531.321317	1060.62808	-0.6637	-0.00035264	-2.8491	-0.0015138	-3.5128	-0.0018664	531.319555565115	95.322	2.6544	95.322	94.812	97.466	0					162	61	5	0	0	0	0.6921	1	9506	9506		32.812	0.85756	1	1864100	+		8633	25355	6071	6077	9925	9925					0.1001919289108173
FGKILFRNT	9	Unmodified	_FGKILFRNT_					0	0	0		ENST00000562946.5_1_15:42519884-42565596:-|nuORF;ENSG00000103978|ENST00000389834|TMEM87A;nc|ENSG00000103978|Q8NBN3-2|TMEM87A	ENST00000562946.5_1_15:42519884-42565596:-|nuORF	ENST00000562946.5_1_15:42519884-42565596:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3248901367188	2	548.319109	1094.62366	-0.48454	-0.00026568	-1.1229	-0.00061573	-1.6075	-0.00088141	548.3184558335702	109.55	0.33806	109.5	109.37	109.7	-0.049324					28	17	2	0	0	0	0.72402	1	11931	11931		38.806	3.6541	1	1365800			8634	2107	6072	6078	9926	9926					0.0801372846817685
FGKLFRKS	8	Unmodified	_FGKLFRKS_					0	0	0		nc|ENSG00000023287|Q8TDY2-2|RB1CC1;ENSG00000023287|ENST00000025008|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.796142578125	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.13	1	59.13	58.63	59.63	0								0	0	0	0.29694	1	5139	5139		37.028	11.578	1				8635	856	6073	6079	9927	9927					0.08446074267988024
FGKLFRKS	8	Unmodified	_FGKLFRKS_					0	0	0		nc|ENSG00000023287|Q8TDY2-2|RB1CC1;ENSG00000023287|ENST00000025008|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7959899902344	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.137	1	59.123	58.623	59.623	-0.013729								0	0	0	0.29755	1	5413	5413		24.203	3.7209	1				8636	856	6073	6079	9928	9928					0.08446074267988024
FGKLFRKS	8	Unmodified	_FGKLFRKS_					0	0	0		nc|ENSG00000023287|Q8TDY2-2|RB1CC1;ENSG00000023287|ENST00000025008|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.796142578125	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.072	1	59.159	58.659	59.659	0.087002								0	0	0	0.3037	1	5042	5042		18.324	0	1				8637	856	6073	6079	9929	9929					0.08446074267988024
FGKLFRKS	8	Unmodified	_FGKLFRKS_					0	0	0		nc|ENSG00000023287|Q8TDY2-2|RB1CC1;ENSG00000023287|ENST00000025008|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958984375	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.87479	1	3997	3997		30.504	3.7075	1	412030			8638	856	6073	6079	9930	9930					0.08446074267988024
FGKLFRKS	8	Unmodified	_FGKLFRKS_					0	0	0		nc|ENSG00000023287|Q8TDY2-2|RB1CC1;ENSG00000023287|ENST00000025008|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7957458496094	2	491.795269	981.575986	-1.1725	-0.00057664	2.0381	0.0010023	0.86553	0.00042567	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.80706	1	4454	4454		19.36	1.995	1	3001500			8639	856	6073	6079	9931	9931					0.08446074267988024
FGKLVALAAH	10	Unmodified	_FGKLVALAAH_					0	0	0			REV__ENSG00000101417|ENST00000409299|PXMP4	REV__ENSG00000101417|ENST00000409299|PXMP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.81103515625	2	513.808377	1025.6022	0.14837	7.6233E-05	1.0682	0.00054883	1.2165	0.00062507	513.8088134492856	48.067	1.4161	48.057	47.714	49.13	-0.0093269					122	36	4	0	0	0	0.84112	1	3912	3912		37.159	11.096	1	1557500	+		8640	17278	6074	6080	9932	9932					0.0904234343945518
FGKLVALAAH	10	Unmodified	_FGKLVALAAH_					0	0	0			REV__ENSG00000101417|ENST00000409299|PXMP4	REV__ENSG00000101417|ENST00000409299|PXMP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.3121948242188	2	513.808377	1025.6022	-0.47161	-0.00024232	1.6041	0.00082419	1.1325	0.00058187	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.86452	1	4001	4001		30.504	5.0535	1	1552900	+		8641	17278	6074	6080	9933	9933					0.0904234343945518
FGKLVALAAH	10	Unmodified	_FGKLVALAAH_					0	0	0			REV__ENSG00000101417|ENST00000409299|PXMP4	REV__ENSG00000101417|ENST00000409299|PXMP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8096923828125	2	513.808377	1025.6022	-0.38907	-0.00019991	1.6539	0.00084981	1.2649	0.0006499	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.86201	1	3609	3609		24.203	1.1603	1	1358900	+		8642	17278	6074	6080	9934	9934					0.0904234343945518
FGKLVALAAH	10	Unmodified	_FGKLVALAAH_					0	0	0			REV__ENSG00000101417|ENST00000409299|PXMP4	REV__ENSG00000101417|ENST00000409299|PXMP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8089599609375	2	513.808377	1025.6022	0.34332	0.0001764	0.75485	0.00038785	1.0982	0.00056425	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.81018	1	3617	3617		38.806	9.6566	1	1306000	+		8643	17278	6074	6080	9935	9935					0.0904234343945518
FGKLYNSNSA	10	Unmodified	_FGKLYNSNSA_					0	0	0		ENST00000582151.1_1_17:7486853-7487033:+|nuORF	ENST00000582151.1_1_17:7486853-7487033:+|nuORF	ENST00000582151.1_1_17:7486853-7487033:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.7720947265625	2	550.772188	1099.52982	-0.62011	-0.00034154	0.22988	0.00012661	-0.39023	-0.00021493	550.7721779787771	66.366	0.79084	66.377	66.169	66.96	0.010452					93	39	3	0	0	0	0.28217	2	6235	6213;6235		74.255	1.3758	1	1489500			8644	14110	6075	6081	9936;9937	9937					-0.015960354247454234
FGKTRTTKRL	10	Unmodified	_FGKTRTTKRL_					0	0	0			REV__ENSG00000142178|ENST00000270162|SIK1	REV__ENSG00000142178|ENST00000270162|SIK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8704223632812	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.85466	1	12979	12979		20.947	2.6848	1	5984800	+		8645	19725	6076	6082	9938	9938					0.12459876308253115
FGKVILVKE	9	Unmodified	_FGKVILVKE_					0	0	0		ENSG00000142208|ENST00000649815|AKT1;ENST00000556836.1_1_14:105241211-105241541:-|nuORF;ENST00000557552.1_1_14:105241211-105241541:-|nuORF;nc|ENSG00000142208|P31749-2|AKT1	ENSG00000142208|ENST00000649815|AKT1	ENSG00000142208|ENST00000649815|AKT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.8238525390625	2	516.826235	1031.63792	-0.046472	-2.4018E-05	-1.62	-0.00083724	-1.6664	-0.00086125	517.3267654803483	108.96	0.7654	108.91	108.37	109.14	-0.049324					56	31	2	0	0	0	0.7932	1	11899	11899		21.96	1.013	1	1190900			8646	4550	6077	6083	9939	9939					0.12336380896454102
FGKVVPKT	8	Unmodified	_FGKVVPKT_					0	0	0		ENST00000415659.2_1_5:122364834-122372365:-|nuORF;ENSG00000168938|ENST00000306442|PPIC	ENST00000415659.2_1_5:122364834-122372365:-|nuORF	ENST00000415659.2_1_5:122364834-122372365:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26300048828125	2	438.271096	874.527639	0.20768	9.1021E-05	4.3545	0.0019085	4.5622	0.0019995	438.2725573945407	41.715	0.28706	41.719	41.545	41.832	0.003418					9	6	2	0	0	0	0.4196	1	3095	3095		25.45	8.0852	1	90869			8647	11383	6078	6084	9940	9940					0.08535580628085881
FGKVVPKT	8	Unmodified	_FGKVVPKT_					0	0	0		ENST00000415659.2_1_5:122364834-122372365:-|nuORF;ENSG00000168938|ENST00000306442|PPIC	ENST00000415659.2_1_5:122364834-122372365:-|nuORF	ENST00000415659.2_1_5:122364834-122372365:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.263671875	2	438.271096	874.527639	0.23599	0.00010343	3.081	0.0013503	3.3169	0.0014537	438.27244428217995	36.159	0.33114	36.441	36.307	36.638	0.28173					15	7	3	0	0	0	0.4196	1	2809	2809		33.516	17.042	1	571260			8648	11383	6078	6084	9941	9941					0.08535580628085881
FGKWFLITLL	10	Unmodified	_FGKWFLITLL_					0	0	0			REV__ENST00000488921.5_1_9:94874807-94874840:-|nuORF	REV__ENST00000488921.5_1_9:94874807-94874840:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.3713989257812	2	619.37081	1236.72707	-0.10662	-6.6034E-05	1.9738	0.0012225	1.8672	0.0011565	619.3719649656875	101.89	1.4654	101.89	101.45	102.91	0					98	36	4	0	0	0	0.86718	1	10394	10394		27.882	3.3631	1	1989800	+		8649	27608	6079	6085	9942	9942					0.11817215855990071
FGLGKRVVVPH	11	Unmodified	_FGLGKRVVVPH_					0	0	0		ENST00000590906.5_1_19:34289275-34290499:+|nuORF	ENST00000590906.5_1_19:34289275-34290499:+|nuORF	ENST00000590906.5_1_19:34289275-34290499:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8687744140625	2	604.866757	1207.71896	3.2	0.0019356	0.13298	8.0437E-05	3.333	0.002016	604.8668313770175	117.51	0.42224	117.48	117.29	117.71	-0.02433					16	12	2	0	0	0	0.77538	1	12996	12996		16.473	2.336	1	52655			8650	14266	6080	6086	9943	9943					0.12341081659201336
FGLGRLGP	8	Unmodified	_FGLGRLGP_					0	0	0		ENSG00000267221|ENST00000587304|C17orf113	ENSG00000267221|ENST00000587304|C17orf113	ENSG00000267221|ENST00000587304|C17orf113	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7395324707031	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.92176	1	1860	1860		46.766	7.7449	1	1654100			8651	8956	6081	6087	9944	9944					0.0502585427974509
FGLGRLGP	8	Unmodified	_FGLGRLGP_					0	0	0		ENSG00000267221|ENST00000587304|C17orf113	ENSG00000267221|ENST00000587304|C17orf113	ENSG00000267221|ENST00000587304|C17orf113	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.73992919921875	2	408.739963	815.465373	1.5082	0.00061648	-2.0092	-0.00082126	-0.50101	-0.00020478	408.739095634202	34.891	2.006	35.101	34.812	36.818	0.21003					151	50	4	0	0	0	0.89457	2	2731	2685;2731		46.766	0	1	5089300			8652	8956	6081	6087	9945;9946	9946					0.0502585427974509
FGLIALINK	9	Unmodified	_FGLIALINK_					0	0	0			REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.8135681152344	2	494.813128	987.611703	-0.073811	-3.6523E-05	-0.83851	-0.00041491	-0.91232	-0.00045143	494.8125328579167	110.35	1.0814	110.3	110.18	111.26	-0.055077					57	37	2	0	0	0	0.76996	1	12030	12030		33.516	6.7195	1	189850	+		8653	19449	6082	6088	9947	9947					0.11740111724986946
FGLIALINK	9	Unmodified	_FGLIALINK_					0	0	0			REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	494.813128	987.611703	-0.073811	-3.6523E-05	-0.83851	-0.00041491	-0.91232	-0.00045143	494.8125328579167	110.35	1.0814	110.3	110.18	111.26	-0.055077	-0.1036	0.0007361	NaN	33.516	57	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189850	+		8654	19449	6082	6088							0.11740111724986946
FGLIALINK	9	Unmodified	_FGLIALINK_					0	0	0			REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	494.813128	987.611703	1.6348	0.00080891	-3.0199	-0.0014943	-1.3851	-0.00068538	494.8116287870196	110.45	0.89052	110.51	110.38	111.27	0.054062	0.1036	-0.0014227	NaN	33.516	43	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142440	+		8655	19449	6082	6088							0.11740111724986946
FGLIGVGH	8	Unmodified	_FGLIGVGH_					0	0	0			REV__nc|ENSG00000130377|Q5FVE4-2|ACSBG2	REV__nc|ENSG00000130377|Q5FVE4-2|ACSBG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.22564697265625	2	400.226688	798.438824	0.19039	7.6198E-05	-2.2238	-0.00089004	-2.0335	-0.00081384	400.2256905214053	40.131	1.7936	40.212	40.004	41.798	0.081345					102	56	2	0	0	0	0.91333	1	2535	2535		43.626	10.133	1	1154400	+		8656	18871	6083	6089	9948	9948					0.0315416538842328
FGLIKGARV	9	Unmodified	_FGLIKGARV_					0	0	0		ENSG00000175267|ENST00000389398|VWA3A	ENSG00000175267|ENST00000389398|VWA3A	ENSG00000175267|ENST00000389398|VWA3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.8013000488281	2	480.803094	959.591636	-0.2736	-0.00013155	-3.9156	-0.0018826	-4.1892	-0.0020142	480.80110367170755	95.033	3.9341	95.453	94.933	98.867	0.41964					263	95	5	0	0	0	0.76996	1	11499	11499		33.516	1.5607	1	9403500			8657	7003	6084	6090	9949	9949					0.1102236078503438
FGLQKELLK	9	Unmodified	_FGLQKELLK_					0	0	0		ENST00000526500.5_1_11:111859671-111889757:+|nuORF	ENST00000526500.5_1_11:111859671-111889757:+|nuORF	ENST00000526500.5_1_11:111859671-111889757:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3270263671875	2	538.329142	1074.64373	-0.51586	-0.0002777	-3.2787	-0.001765	-3.7945	-0.0020427	538.3275058895035	107.82	0.98666	107.82	106.89	107.87	0					48	23	3	0	0	0	0.78058	1	11165	11165		30.504	0.18592	1	4352400			8658	13260	6085	6091	9950	9950					0.10939479408125408
FGLTPSCT	8	Unmodified	_FGLTPSCT_					0	0	0			REV__ENSG00000126705|ENST00000673934|AHDC1	REV__ENSG00000126705|ENST00000673934|AHDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1939392089844	2	413.194196	824.37384	0.37594	0.00015534	-2.7567	-0.0011391	-2.3808	-0.00098372	413.1933424358141	82.469	1.3874	82.896	82.352	83.74	0.42663					91	33	5	0	0	0	0.86791	1	9560	9560		28.254	1.4582	1	2821200	+		8659	18709	6086	6092	9951	9951					-0.0453719719973833
FGLWGALIAFP	11	Unmodified	_FGLWGALIAFP_					0	0	0		ENST00000445628.5_1_22:38452434-38453409:+|nuORF	ENST00000445628.5_1_22:38452434-38453409:+|nuORF	ENST00000445628.5_1_22:38452434-38453409:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.3328857421875	2	596.331685	1190.64882	-1.3013	-0.00077598	3.2893	0.0019615	1.9881	0.0011855	596.3335316328556	96.129	3.5172	96.331	95.353	98.87	0.20242					227	81	4	0	0	0	0.63354	1	9780	9780		40.573	9.0428	1	1353000			8660	11825	6087	6093	9952	9952					0.061117832707623165
FGMKWLLVAL	10	Unmodified	_FGMKWLLVAL_					0	0	0			REV__ENSG00000144668|ENST00000264741|ITGA9	REV__ENSG00000144668|ENST00000264741|ITGA9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3433227539062	2	589.343738	1176.67292	-1.324	-0.0007803	-0.12491	-7.3613E-05	-1.4489	-0.00085391	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.85934	1	9747	9747		35.618	6.4482	1	17904000	+		8661	19906	6088	6094	9953	9953					0.09165300432778167
FGMKWLLVAL	10	Unmodified	_FGMKWLLVAL_					0	0	0			REV__ENSG00000144668|ENST00000264741|ITGA9	REV__ENSG00000144668|ENST00000264741|ITGA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3430786132812	2	589.343738	1176.67292	0.82336	0.00048524	-2.1597	-0.0012728	-1.3364	-0.00078758	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.85939	1	11237	11237		23.042	0.46283	1	9460500	+		8662	19906	6088	6094	9954	9954					0.09165300432778167
FGNKAAVLSV	10	Unmodified	_FGNKAAVLSV_					0	0	0		ENSG00000088812|ENST00000262919|ATRN	ENSG00000088812|ENST00000262919|ATRN	ENSG00000088812|ENST00000262919|ATRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	503.28900146484375	2	503.290017	1004.56548	-0.44824	-0.0002256	3.3758	0.001699	2.9276	0.0014734	503.2916446910653	109.63	1.1143	109.75	109.43	110.55	0.12289					97	45	3	0	0	0	0.80179	1	11815	11815		39.253	5.3312	1	1304700			8663	1595	6089	6095	9955	9955					0.0633804682288428
FGNKAAVLSV	10	Unmodified	_FGNKAAVLSV_					0	0	0		ENSG00000088812|ENST00000262919|ATRN	ENSG00000088812|ENST00000262919|ATRN	ENSG00000088812|ENST00000262919|ATRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	503.29364013671875	2	503.290017	1004.56548	0.80608	0.00040569	2.1927	0.0011036	2.9988	0.0015092	503.2909725186853	109.68	1.4053	109.76	109.44	110.85	0.078552					88	52	3	0	0	0	0.85934	1	11780	11780		35.618	4.0885	1	1533800			8664	1595	6089	6095	9956	9956					0.0633804682288428
FGNKAAVLSV	10	Unmodified	_FGNKAAVLSV_					0	0	0		ENSG00000088812|ENST00000262919|ATRN	ENSG00000088812|ENST00000262919|ATRN	ENSG00000088812|ENST00000262919|ATRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.7936706542969	2	503.290017	1004.56548	1.7384	0.00087494	1.4164	0.00071285	3.1548	0.0015878	503.29066537682445	109.62	1.4439	109.69	109.43	110.88	0.067932					122	60	3	0	0	0	0.85934	1	13287	13287		35.618	4.0885	1	1719700			8665	1595	6089	6095	9957	9957					0.0633804682288428
FGNKVNPLL	9	Unmodified	_FGNKVNPLL_					0	0	0		nc|ENSG00000184465|A2RRH5-2|WDR27;nc|ENSG00000184465|A2RRH5|WDR27;ENSG00000184465|ENST00000448612|WDR27;nc|ENSG00000184465|A2RRH5-3|WDR27;ENST00000546953.1_1_6:170072345-170089107:-|nuORF	nc|ENSG00000184465|A2RRH5-2|WDR27	nc|ENSG00000184465|A2RRH5-2|WDR27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.29071044921875	2	501.292559	1000.57057	-0.17938	-8.992E-05	-3.5004	-0.0017547	-3.6797	-0.0018446	501.29064541648853	99.317	1.4422	99.365	98.853	100.3	0.047523					88	33	4	0	0	0	0.76996	1	10645	10645		33.516	5.6333	1	1053700			8666	7615	6090	6096	9958	9958					0.07030350685522535
FGNLAQHF	8	Unmodified	_FGNLAQHF_					0	0	0			REV__ENSG00000146476|ENST00000367294|ARMT1	REV__ENSG00000146476|ENST00000367294|ARMT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.2343444824219	2	467.232502	932.450451	-0.63925	-0.00029868	2.3226	0.0010852	1.6834	0.00078652	467.2335443561671	68.394	1.2899	68.358	67.994	69.284	-0.036301					131	48	4	0	0	0	0.9159	1	6653	6653		44.531	17.735	1	1309700	+		8667	20020	6091	6097	9959	9959					-0.018476375882414686
FGNSLMILLI	10	Unmodified	_FGNSLMILLI_					0	0	0		ENSG00000177462|ENST00000641945|OR2T8;ENSG00000177212|ENST00000641220|OR2T33	ENSG00000177462|ENST00000641945|OR2T8	ENSG00000177462|ENST00000641945|OR2T8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8250732421875	2	560.825378	1119.6362	0.79507	0.0004459	0.10498	5.8874E-05	0.90005	0.00050477	560.8252820516493	50.707	0.90748	51.155	50.845	51.753	0.44761					49	21	3	0	0	0	0.4892	2	5010	4998;5010		56.721	3.599	1	2468000			8668	7129	6092	6098	9960;9961	9961					0.08117003816209944
FGPARVALVP	10	Unmodified	_FGPARVALVP_					0	0	0			REV__nc|ENSG00000174348|Q7Z5L7-4|PODN	REV__nc|ENSG00000174348|Q7Z5L7-4|PODN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8087158203125	2	513.808377	1025.6022	0.090877	4.6693E-05	1.0576	0.00054341	1.1485	0.00059011	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.86718	1	4189	4189		27.882	2.4321	1	1448700	+		8669	21987	6093	6099	9962	9962					0.0904234343945518
FGPARVALVP	10	Unmodified	_FGPARVALVP_					0	0	0			REV__nc|ENSG00000174348|Q7Z5L7-4|PODN	REV__nc|ENSG00000174348|Q7Z5L7-4|PODN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8087768554688	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.86589	1	4571	4571		29.15	9.7896	1	771120	+		8670	21987	6093	6099	9963	9963					0.0904234343945518
FGPIGRLG	8	Unmodified	_FGPIGRLG_					0	0	0			REV__ENSG00000134871|ENST00000360467|COL4A2	REV__ENSG00000134871|ENST00000360467|COL4A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.7394714355469	2	408.739963	815.465373	1.5082	0.00061648	-2.0092	-0.00082126	-0.50101	-0.00020478	408.739095634202	34.891	2.006	35.101	34.812	36.818	0.21003					151	50	4	0	0	0	0.87276	1	2795	2795		29.842	1.5873	1	5089300	+		8671	19173	6094	6100	9964	9964					0.0502585427974509
FGPLAAVPK	9	Unmodified	_FGPLAAVPK_					0	0	0		ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF	ENSG00000108559|ENST00000573584|NUP88	ENSG00000108559|ENST00000573584|NUP88	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2730407714844	2	450.271096	898.527639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.62	1	111.65	111.15	112.15	0.032707								0	0	0	0.2969	1	13546	13546		31.955	2.1133	1				8672	2418	6095	6101	9965	9965					0.07431580628076517
FGPLCDCLGTI	11	Unmodified	_FGPLCDCLGTI_					0	0	0			REV__ENSG00000145794|ENST00000503335|MEGF10	REV__ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.766845703125	2	569.767203	1137.51985	0.50789	0.00028938	-1.2291	-0.0007003	-0.72121	-0.00041092	569.7663611831885	60.525	0.47499	60.641	60.356	60.831	0.11676					53	19	3	0	0	0	0.69995	1	5269	5269		31.53	1.0262	1	513000	+		8673	19968	6096	6102	9966	9966					-0.043406827459875785
FGPPLWLA	8	Unmodified	_FGPPLWLA_					0	0	0			REV__ENSG00000204301|ENST00000375023|NOTCH4	REV__ENSG00000204301|ENST00000375023|NOTCH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7557373046875	2	450.752539	899.490525	-0.14135	-6.3713E-05	3.8471	0.0017341	3.7058	0.0016704	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.84567	1	8157	8157		24.504	2.5441	1	337080	+		8674	23479	6097	6103	9967	9967					0.036759090823238694
FGPTQLRG	8	Unmodified	_FGPTQLRG_					0	0	0		ENST00000565534.5_1_15:75660179-75660924:-|nuORF	ENST00000565534.5_1_15:75660179-75660924:-|nuORF	ENST00000565534.5_1_15:75660179-75660924:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.26483154296875	2	438.240327	874.466101	-1.2161	-0.00053294	2.5993	0.0011391	1.3832	0.00060617	438.24161986202154	40.543	0.13631	41.132	41.013	41.149	0.58915					6	3	2	0	0	0	0.4196	1	3469	3469		34.173	0	1	1502300			8675	13916	6098	6104	9968	9968					0.023846489288075645
FGPVKRKP	8	Unmodified	_FGPVKRKP_					0	0	0			REV__ENST00000485756.1_1_13:27830412-27830463:+|nuORF	REV__ENST00000485756.1_1_13:27830412-27830463:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.79071044921875	2	464.789987	927.565421	-0.072724	-3.3801E-05	1.6528	0.00076819	1.58	0.00073439	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.884	1	2104	2104		33.516	10.473	1	297050	+		8676	27531	6099	6105	9969	9969					0.09874091613551172
FGPVKRKP	8	Unmodified	_FGPVKRKP_					0	0	0			REV__ENST00000485756.1_1_13:27830412-27830463:+|nuORF	REV__ENST00000485756.1_1_13:27830412-27830463:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.79156494140625	2	464.789987	927.565421	0.17035	7.9177E-05	1.4022	0.00065173	1.5725	0.0007309	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.80706	1	1748	1748		19.36	1.0356	1	283920	+		8677	27531	6099	6105	9970	9970					0.09874091613551172
FGPYCPPG	8	Unmodified	_FGPYCPPG_					0	0	0		CON__Q7Z794;ENSG00000189182|ENST00000341809|KRT77	CON__Q7Z794	CON__Q7Z794	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.1858215332031	2	419.183632	836.352711	0.72807	0.0003052	-0.68857	-0.00028864	0.039506	1.656E-05	419.1832482670418	100.06	1.0157	100.21	99.721	100.74	0.15073					53	22	3	0	0	0	0.84567	1	10468	10468		24.504	3.5571	1	323170		+	8678	630	6100	6106	9971	9971					-0.07201162508590642
FGQSYTASMQ	10	Unmodified	_FGQSYTASMQ_					0	0	0			REV__nc|ENSG00000186204|Q9HCS2-2|CYP4F12	REV__nc|ENSG00000186204|Q9HCS2-2|CYP4F12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.2442016601562	2	560.242406	1118.47026	0.98187	0.00055008	2.5915	0.0014519	3.5734	0.002002	560.2437469662866	27.215	0.57136	27.188	26.893	27.464	-0.027706					29	15	2	0	0	0	0.57924	1	1208	1208		51.193	5.2204	1	74056	+		8679	22835	6101	6107	9972	9972					-0.08423674430446226
FGREGKQKKSA	11	Unmodified	_FGREGKQKKSA_					0	0	0		ENST00000372625.7_1_X:102883903-102884461:+|nuORF	ENST00000372625.7_1_X:102883903-102884461:+|nuORF	ENST00000372625.7_1_X:102883903-102884461:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.3456420898438	2	618.346386	1234.67822	2.5351	0.0015676	-3.3685	-0.0020829	-0.83344	-0.00051535	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.67778	1	10540	10540		35.152	0.97948	1	980120			8680	10708	6102	6108	9973	9973					0.0702669554896147
FGRKGVAISMV	11	Unmodified	_FGRKGVAISMV_					0	0	0		ENST00000576035.1_1_17:2489687-2489864:-|nuORF	ENST00000576035.1_1_17:2489687-2489864:-|nuORF	ENST00000576035.1_1_17:2489687-2489864:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.8334350585938	2	582.831526	1163.6485	-0.40613	-0.0002367	2.3297	0.0013578	1.9236	0.0011211	582.832911894326	94.456	2.7605	94.456	93.622	96.382	0					111	64	3	0	0	0	0.73893	1	9391	9391		24.519	0.99649	1	367730			8681	14058	6103	6109	9974	9974					0.07322040279223074
FGRNRGRFY	9	Unmodified	_FGRNRGRFY_					0	0	0			REV__ENSG00000054118|ENST00000354618|THRAP3	REV__ENSG00000054118|ENST00000354618|THRAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	586.8070068359375	2	586.807231	1171.59991	-2.0898	-0.0012263	0.79337	0.00046556	-1.2964	-0.00076074	586.8076032418584	59.354	0.51287	59.387	59.09	59.603	0.033203					20	11	2	0	0	0	0.47272	1	5480	5480		53.351	1.8237	1	146020	+		8682	16395	6104	6110	9975	9975					0.020973077543885665
FGRPLLLSA	9	Unmodified	_FGRPLLLSA_					0	0	0		nc|ENSG00000100036|Q6ICL7-2|SLC35E4;ENSG00000100036|ENST00000343605|SLC35E4	nc|ENSG00000100036|Q6ICL7-2|SLC35E4	nc|ENSG00000100036|Q6ICL7-2|SLC35E4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.29296875	2	487.295102	972.575651	-0.085832	-4.1825E-05	-3.823	-0.0018629	-3.9088	-0.0019048	487.29311557745604	91.223	2.7335	91.293	90.723	93.457	0.069328					138	65	3	0	0	0	0.72402	1	9359	9359		38.806	0	1	2116800			8683	1789	6105	6111	9976	9976					0.0882665454812468
FGRPPPKKPL	10	Unmodified	_FGRPPPKKPL_					0	0	0		nc|ENSG00000154556|O94875-2|SORBS2;ENSG00000154556|ENST00000695409|SORBS2	nc|ENSG00000154556|O94875-2|SORBS2	nc|ENSG00000154556|O94875-2|SORBS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8531494140625	2	568.850576	1135.6866	0.87009	0.00049495	3.5097	0.0019965	4.3798	0.0024914	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.85934	1	10780	10780		35.618	0.41757	1	78933000			8684	5285	6106	6112	9977	9977					0.12418294256212903
FGRRAPGGSAK	11	Unmodified	_FGRRAPGGSAK_					0	0	0			REV__nc|ENSG00000185920|Q13635-2|PTCH1	REV__nc|ENSG00000185920|Q13635-2|PTCH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.30615234375	2	552.307064	1102.59957	-0.69245	-0.00038245	-0.17844	-9.8556E-05	-0.8709	-0.000481	552.3068506755722	92.408	2.4109	92.871	91.891	94.302	0.46249					185	56	4	0	0	0	0.7144	1	11040	11040		29.17	0.020503	1	607550	+		8685	30103	6107	6113	9978	9978					0.052378880345031575
FGRTLLELK	9	Unmodified	_FGRTLLELK_					0	0	0		ENST00000502059.6_1_18:43307264-43307348:+|nuORF	ENST00000502059.6_1_18:43307264-43307348:+|nuORF	ENST00000502059.6_1_18:43307264-43307348:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8277587890625	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.7	1	114.67	114.17	115.17	-0.024452								0	0	0	0.32159	1	12711	12711		23.042	1.0826	1				8686	12849	6108	6114	9979	9979					0.10418595265332442
FGRVGVVQL	9	Unmodified	_FGRVGVVQL_					0	0	0		ENSG00000167971|ENST00000343516|CASKIN1	ENSG00000167971|ENST00000343516|CASKIN1	ENSG00000167971|ENST00000343516|CASKIN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7904052734375	2	487.792727	973.5709	-1.0481	-0.00051127	-3.1066	-0.0015154	-4.1547	-0.0020267	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.69914	1	7841	7841		40.573	10.069	1	1176800			8687	6346	6109	6115	9980	9980					0.08305770405377189
FGRYYRVAF	9	Unmodified	_FGRYYRVAF_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.2948608398438	2	589.808908	1177.60326	-0.37304	-0.00022002	-4.2585	-0.0025117	-4.6316	-0.0027317	589.80640550039	75.88	0.74353	76.275	75.91	76.653	0.39507					32	17	3	0	0	0	0.20789	1	8642	8642		31.955	11.008	1	1506200			8688	4062	6110	6116	9981	9981					0.02156557808348225
FGSGVLKINA	10	Unmodified	_FGSGVLKINA_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	503.2857971191406	2	503.290017	1004.56548	-0.060584	-3.0491E-05	3.163	0.0015919	3.1025	0.0015614	503.29162474587787	109.78	0.70062	109.73	109.4	110.1	-0.055084					61	35	2	0	0	0	0.85934	2	11951	11942;11951		35.618	6.4687	1	1014200	+		8689	21697	6111	6117	9982;9983	9983					0.06338046822872911
FGSLIIAL	8	Unmodified	_FGSLIIAL_					0	0	0		nc|ENSG00000137968|Q8NCS7|SLC44A5;nc|ENSG00000137968|Q8NCS7-5|SLC44A5;ENSG00000137968|ENST00000370859|SLC44A5	nc|ENSG00000137968|Q8NCS7|SLC44A5	nc|ENSG00000137968|Q8NCS7|SLC44A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2585144042969	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.82464	1	594	594		21.702	1.2205	1	817900			8690	14949	6112	6118	9984	9984					0.08288775879498189
FGTIESQEP	9	Unmodified	_FGTIESQEP_					0	0	0		ENSG00000146247|ENST00000275034|PHIP	ENSG00000146247|ENST00000275034|PHIP	ENSG00000146247|ENST00000275034|PHIP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.26617431640625	2	504.237647	1006.46074	0.63967	0.00032255	1.9665	0.00099157	2.6062	0.0013141	504.24088977302426	82.295	1.0487	82.769	82.123	83.172	0.47383					47	25	3	0	0	0	0.20789	1	9510	9510		21.96	0	1	177370			8691	4829	6113	6119	9985	9985					-0.04223119444316126
FGTPLPQPSGL	11	Unmodified	_FGTPLPQPSGL_					0	0	0			REV__ENST00000399120.5_1_21:38320506-38334458:-|nuORF	REV__ENST00000399120.5_1_21:38320506-38334458:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.8301391601562	2	557.300581	1112.58661	-0.44166	-0.00024614	-2.0114	-0.0011209	-2.453	-0.0013671	557.2988069222987	101.35	0.86505	101.35	100.91	101.77	0					33	20	3	0	0	0	0.17457	1	10327	10327		21.686	9.4789	1	112620	+		8692	26221	6114	6120	9986	9986					0.03482012131757983
FGTSLFLVVLL	11	Unmodified	_FGTSLFLVVLL_					0	0	0			REV__ENSG00000196772|ENST00000641093|OR14A16	REV__ENSG00000196772|ENST00000641093|OR14A16	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8648681640625	2	604.8681	1207.72165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.58	1	119.56	119.06	120.06	-0.024033								0	0	0	0.56276	1	13248	13248		23.042	3.939	1		+		8693	23171	6115	6121	9987	9987					0.12609492273509204
FGTWPAKL	8	Unmodified	_FGTWPAKL_					0	0	0			REV__ENST00000472868.6_1_3:185823134-185823701:-|nuORF	REV__ENST00000472868.6_1_3:185823134-185823701:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.25323486328125	2	460.255446	918.496338	-0.18509	-8.519E-05	-3.9525	-0.0018192	-4.1376	-0.0019043	460.25349150477365	48.345	1.4474	49.249	48.925	50.372	0.90424					63	35	3	0	0	0	0.93786	1	4672	4672		53.351	0.41475	1	1392900	+		8694	24834	6116	6122	9988	9988					0.033830075939818016
FGVRLPKQ	8	Unmodified	_FGVRLPKQ_					0	0	0			REV__ENSG00000142178|ENST00000270162|SIK1	REV__ENSG00000142178|ENST00000270162|SIK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7873840332031	2	472.787444	943.560336	2.803	0.0013252	1.1935	0.00056428	3.9965	0.0018895	472.78822322934934	114.11	1.0102	114.08	113.49	114.5	-0.024452					41	33	2	0	0	0	0.85277	1	12672	12672		25.45	1.2474	1	115850	+		8695	19725	6117	6123	9989	9989					0.08629787750942342
FGWEEDEDF	9	Unmodified	_FGWEEDEDF_					0	0	0		ENSG00000212747|ENST00000391440|RTL8B;ENSG00000203950|ENST00000370775|RTL8A;ENSG00000134590|ENST00000257013|RTL8C	ENSG00000212747|ENST00000391440|RTL8B	ENSG00000212747|ENST00000391440|RTL8B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.2215576171875	2	587.222194	1172.42983	-0.98916	-0.00058086	1.0767	0.00063225	0.087509	5.1387E-05	587.2227327629114	82.143	0.80794	82.569	82.275	83.083	0.42645					45	19	3	0	0	0	0.35373	1	9497	9497		60.972	16.595	1	831840			8696	3948	6118	6124	9990	9990					-0.149483175492378
FGWEEDEDF	9	Unmodified	_FGWEEDEDF_					0	0	0		ENSG00000212747|ENST00000391440|RTL8B;ENSG00000203950|ENST00000370775|RTL8A;ENSG00000134590|ENST00000257013|RTL8C	ENSG00000212747|ENST00000391440|RTL8B	ENSG00000212747|ENST00000391440|RTL8B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	587.222194	1172.42983	0.0093965	5.5178E-06	0.26849	0.00015766	0.27789	0.00016318	587.2222157761405	82.101	0.88763	82.575	82.201	83.088	0.47383	0.0028097	-0.00042902	NaN	60.972	48	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	750670			8697	3948	6118	6124							-0.149483175492378
FGYDEEQPL	9	Unmodified	_FGYDEEQPL_					0	0	0			REV__ENSG00000124126|ENST00000371941|PREX1	REV__ENSG00000124126|ENST00000371941|PREX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.2435302734375	2	549.242929	1096.47131	-0.50687	-0.0002784	-2.637	-0.0014484	-3.1439	-0.0017268	549.2413880076334	56.619	0.78617	56.607	56.39	57.176	-0.012203					46	30	2	0	0	0	0.026451	1	5085	5085		120.62	37.87	1	747570	+		8698	18559	6119	6125	9991	9991					-0.07307136789881952
FGYDEEQPL	9	Unmodified	_FGYDEEQPL_					0	0	0			REV__ENSG00000124126|ENST00000371941|PREX1	REV__ENSG00000124126|ENST00000371941|PREX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.2408447265625	2	549.242929	1096.47131	0.40902	0.00022465	-3.504	-0.0019245	-3.095	-0.0016999	549.2408821601733	56.714	0.92148	56.685	56.397	57.318	-0.02866					52	33	2	0	0	0	0.14386	3	5189	5189;5193;5199		84.916	10.949	1	614600	+		8699	18559	6119	6125	9992;9993;9994	9992					-0.07307136789881952
FGYDEEQPL	9	Unmodified	_FGYDEEQPL_					0	0	0			REV__ENSG00000124126|ENST00000371941|PREX1	REV__ENSG00000124126|ENST00000371941|PREX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.2387084960938	2	549.242929	1096.47131	-0.12487	-6.8586E-05	-2.9509	-0.0016208	-3.0758	-0.0016893	549.241206528311	56.572	1.1472	56.605	56.484	57.632	0.033184					61	42	2	0	0	0	0.14386	4	5113	5105;5113;5131;5177		84.916	8.8964	1	802230	+		8700	18559	6119	6125	9995;9996;9997;9998	9996					-0.07307136789881952
FHAGKKSNT	9	Unmodified	_FHAGKKSNT_					0	0	0		nc|ENSG00000167766|P51522-2|ZNF83;ENSG00000167766|ENST00000597597|ZNF83	nc|ENSG00000167766|P51522-2|ZNF83	nc|ENSG00000167766|P51522-2|ZNF83	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2590026855469	2	495.261791	988.509028	-1.7096	-0.00084669	-3.9217	-0.0019423	-5.6313	-0.002789	495.25992726495855	40.741	2.1466	41.33	40.797	42.943	0.58915					138	58	4	0	0	0	0.7932	1	3511	3511		25.45	0.93098	1	7011700			8701	6328	6120	6126	9999	9999					0.014314189862147941
FHCGSLGAV	9	Carbamidomethyl (C)	_FHC(Carbamidomethyl (C))GSLGAV_	FHC(1)GSLGAV		FHC(50)GSLGAV		0	1	0			REV__ENSG00000186564|ENST00000334793|FOXD2	REV__ENSG00000186564|ENST00000334793|FOXD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	474.22308349609375	2	474.22382	946.433086	-0.93694	-0.00044432	-1.301	-0.00061698	-2.238	-0.0010613	474.2235736809941	68.894	0.63741	69.03	68.782	69.419	0.13521					61	28	3	0	0	0	0.5393	1	6237	6237		50.025	9.2464	1	348720	+		8702	22862	6121	6127	10000	10000	276				-0.042273011855627374
FHCGSLGAV	9	Carbamidomethyl (C)	_FHC(Carbamidomethyl (C))GSLGAV_					0	1	0			REV__ENSG00000186564|ENST00000334793|FOXD2	REV__ENSG00000186564|ENST00000334793|FOXD2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	474.22382	946.433086	-0.10707	-5.0777E-05	-0.57638	-0.00027333	-0.68346	-0.00032411	474.22370243282955	69.197	0.44882	69.223	68.996	69.445	0.02636	0.074707	0.00063591	NaN	50.025	32	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81603	+		8703	22862	6121	6127			276				-0.042273011855627374
FHCGSLGAV	9	Carbamidomethyl (C)	_FHC(Carbamidomethyl (C))GSLGAV_					0	1	0			REV__ENSG00000186564|ENST00000334793|FOXD2	REV__ENSG00000186564|ENST00000334793|FOXD2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	474.22382	946.433086	-1.422	-0.00067434	0.84629	0.00040133	-0.57571	-0.00027302	474.2243038620167	69.209	0.43912	69.242	68.974	69.413	0.033005	0.092812	0.0019852	NaN	50.025	30	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75807	+		8704	22862	6121	6127			276				-0.042273011855627374
FHCGSLGAV	9	Carbamidomethyl (C)	_FHC(Carbamidomethyl (C))GSLGAV_					0	1	0			REV__ENSG00000186564|ENST00000334793|FOXD2	REV__ENSG00000186564|ENST00000334793|FOXD2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	474.22382	946.433086	-1.0302	-0.00048856	-0.79461	-0.00037682	-1.8248	-0.00086538	474.2236350594803	69.117	0.65221	69.182	68.918	69.571	0.065514	0.033523	0.00042893	NaN	50.025	56	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	381450	+		8705	22862	6121	6127			276				-0.042273011855627374
FHDTGPSDLA	10	Unmodified	_FHDTGPSDLA_					0	0	0			REV__nc|ENSG00000009780|Q8TAV0-5|FAM76A	REV__nc|ENSG00000009780|Q8TAV0-5|FAM76A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2418823242188	2	530.240721	1058.46689	0.065885	3.4935E-05	3.2726	0.0017353	3.3385	0.0017702	530.2421087009296	34.094	0.70897	34.038	33.785	34.494	-0.056385					31	15	3	0	0	0	0.5766	1	2141	2141		51.335	5.3835	1	210830	+		8706	16152	6122	6128	10001	10001					-0.06000601212804213
FHEPPAVH	8	Unmodified	_FHEPPAVH_					0	0	0			REV__ENST00000283206.8_1_2:112874356-112874578:+|nuORF	REV__ENST00000283206.8_1_2:112874356-112874578:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.2335510253906	2	467.232502	932.450451	0.4755	0.00022217	1.3564	0.00063378	1.8319	0.00085595	467.23311313074316	67.929	1.2916	68.056	67.71	69.002	0.12748					151	49	4	0	0	0	0.89457	1	6136	6136		37.028	1.8278	1	2838000	+		8707	24618	6123	6129	10002	10002					-0.018476375882414686
FHFAVLVC	8	Unmodified	_FHFAVLVC_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.24468994140625	2	468.244024	934.473494	-1.7184	-0.00080463	3.2577	0.0015254	1.5393	0.00072075	468.24544693372513	105.87	0.94327	105.94	105.42	106.36	0.073112					61	23	4	0	0	0	0.88393	1	11242	11242		33.493	0.68056	1	1174400			8708	3805	6124	6130	10003	10003					0.003636652048612632
FHGSKHHS	8	Unmodified	_FHGSKHHS_					0	0	0		nc|ENSG00000021645|Q9HDB5-3|NRXN3;nc|ENSG00000021645|Q9HDB5-2|NRXN3;nc|ENSG00000021645|Q9HDB5-4|NRXN3;nc|ENSG00000021645|Q9HDB5|NRXN3	nc|ENSG00000021645|Q9HDB5-3|NRXN3	nc|ENSG00000021645|Q9HDB5-3|NRXN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72332763671875	2	468.725375	935.436198	-0.27946	-0.00013099	-4.186	-0.0019621	-4.4654	-0.0020931	468.7234027551395	85.666	1.1864	86.109	85.545	86.731	0.44331					75	28	4	0	0	0	0.89043	1	10023	10023		35.618	0.41757	1	844910			8709	14742	6125	6131	10004	10004					-0.03410290016529416
FHHIKLLII	9	Unmodified	_FHHIKLLII_					0	0	0			REV__ENST00000498446.1_1_10:93247340-93247547:+|nuORF	REV__ENST00000498446.1_1_10:93247340-93247547:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3635864257812	2	567.363319	1132.71209	-0.82344	-0.00046719	1.2222	0.00069342	0.39873	0.00022623	567.3638410249442	44.579	2.1787	44.545	43.955	46.134	-0.03347					156	50	5	0	0	0	0.77546	1	3661	3661		31.955	9.995	1	2613600	+		8710	27789	6126	6132	10005	10005					0.15103768778658377
FHHIKLLII	9	Unmodified	_FHHIKLLII_					0	0	0			REV__ENST00000498446.1_1_10:93247340-93247547:+|nuORF	REV__ENST00000498446.1_1_10:93247340-93247547:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3632202148438	2	567.363319	1132.71209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.093	1	49	48.5	49.5	-0.093178								0	0	0	0.32542	1	3779	3779		21.702	1.7056	1		+		8711	27789	6126	6132	10006	10006					0.15103768778658377
FHHLISYITD	10	Unmodified	_FHHLISYITD_					0	0	0			REV__ENSG00000010292|ENST00000315579|NCAPD2	REV__ENSG00000010292|ENST00000315579|NCAPD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.3125	2	623.316763	1244.61897	0.39576	0.00024668	-0.86553	-0.0005395	-0.46976	-0.00029281	623.3157005711116	55.846	0.64719	56.247	55.782	56.429	0.40101					30	15	3	0	0	0	0.67608	1	5738	5738		45.952	3.6139	1	827170	+		8712	16161	6127	6133	10007	10007					0.006447995347571123
FHIHRRHCL	9	Unmodified	_FHIHRRHCL_					0	0	0		ENST00000256646.6_1_1:120456736-120456799:-|nuORF	ENST00000256646.6_1_1:120456736-120456799:-|nuORF	ENST00000256646.6_1_1:120456736-120456799:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7853698730469	3	406.885693	1217.63525	0.30153	0.00012269	4.2004	0.0017091	4.5019	0.0018318	406.88731834287586	29.643	0.77282	29.553	29.319	30.092	-0.089544					31	17	3	0	0	0	0.20789	1	1922	1922		34.173	8.2808	1	196320			8713	9342	6128	6134	10008	10008					0.03513647010549903
FHIKVKPGLL	10	Unmodified	_FHIKVKPGLL_					0	0	0		ENST00000237536.8_2_20:35414692-35414812:-|nuORF	ENST00000237536.8_2_20:35414692-35414812:-|nuORF	ENST00000237536.8_2_20:35414692-35414812:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	576.3687133789062	2	576.368601	1150.72265	-0.70382	-0.00040566	1.5566	0.00089719	0.85281	0.00049153	576.3693112685854	39.803	1.7451	39.772	38.985	40.73	-0.03027					120	44	4	0	0	0	0.86589	1	2801	2801		29.15	2.3535	1	583880			8714	9238	6129	6135	10009	10009					0.15331751433086538
FHIKVKPGLL	10	Unmodified	_FHIKVKPGLL_					0	0	0		ENST00000237536.8_2_20:35414692-35414812:-|nuORF	ENST00000237536.8_2_20:35414692-35414812:-|nuORF	ENST00000237536.8_2_20:35414692-35414812:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3697509765625	2	576.368601	1150.72265	-2.801	-0.0016144	2.5085	0.0014458	-0.29257	-0.00016863	576.3698140239752	41.565	1.4549	41.979	41.329	42.784	0.4139					91	38	3	0	0	0	0.85939	1	3647	3647		23.042	0.46283	1	1909200			8715	9238	6129	6135	10010	10010					0.15331751433086538
FHIKVKPGLL	10	Unmodified	_FHIKVKPGLL_					0	0	0		ENST00000237536.8_2_20:35414692-35414812:-|nuORF	ENST00000237536.8_2_20:35414692-35414812:-|nuORF	ENST00000237536.8_2_20:35414692-35414812:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3723754882812	2	576.368601	1150.72265	-1.8889	-0.0010887	1.4195	0.00081817	-0.46939	-0.00027054	576.3692460621713	40.332	1.1916	40.921	40.26	41.451	0.58915					99	31	4	0	0	0	0.86589	1	3477	3477		29.15	4.9468	1	6057000			8716	9238	6129	6135	10011	10011					0.15331751433086538
FHIQKAIGL	9	Unmodified	_FHIQKAIGL_					0	0	0		ENST00000525259.1_1_11:16736420-16761040:-|nuORF	ENST00000525259.1_1_11:16736420-16761040:-|nuORF	ENST00000525259.1_1_11:16736420-16761040:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.80859375	2	513.808377	1025.6022	-0.47161	-0.00024232	1.6041	0.00082419	1.1325	0.00058187	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.77546	1	4076	4076		31.955	0	1	1552900			8717	13231	6130	6136	10012	10012					0.0904234343945518
FHIQKAIGL	9	Unmodified	_FHIQKAIGL_					0	0	0		ENST00000525259.1_1_11:16736420-16761040:-|nuORF	ENST00000525259.1_1_11:16736420-16761040:-|nuORF	ENST00000525259.1_1_11:16736420-16761040:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.80859375	2	513.808377	1025.6022	-0.12671	-6.5103E-05	1.3179	0.00067714	1.1912	0.00061204	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.7932	1	4095	4095		25.45	1.2474	1	1731500			8718	13231	6130	6136	10013	10013					0.0904234343945518
FHIQKAIGL	9	Unmodified	_FHIQKAIGL_					0	0	0		ENST00000525259.1_1_11:16736420-16761040:-|nuORF	ENST00000525259.1_1_11:16736420-16761040:-|nuORF	ENST00000525259.1_1_11:16736420-16761040:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.808837890625	2	513.808377	1025.6022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.181	1	47.104	46.604	47.604	0.92315								0	0	0	0.35186	1	4352	4352		47.916	5.4411	1				8719	13231	6130	6136	10014	10014					0.0904234343945518
FHKADYAGNEK	11	Unmodified	_FHKADYAGNEK_					0	0	0			REV__nc|ENSG00000141030|Q9UNS2-2|COPS3	REV__nc|ENSG00000141030|Q9UNS2-2|COPS3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3065185546875	2	640.306926	1278.5993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.22	1	111.25	110.75	111.75	0.030388								0	0	0	0.56276	1	12187	12187		27.047	4.0048	1		+		8720	19658	6131	6137	10015	10015					-0.028855764760237435
FHKGIKTVP	9	Unmodified	_FHKGIKTVP_					0	0	0		L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|25|2|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|25|2|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|25|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8092651367188	2	513.808377	1025.6022	0.37872	0.00019459	0.75131	0.00038603	1.13	0.00058062	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.7932	1	4156	4156		26.693	1.1189	1	971720			8721	14586	6132	6138	10016	10016					0.0904234343945518
FHKHVLTL	8	Unmodified	_FHKHVLTL_					0	0	0			REV__nc|ENSG00000164329|Q6PIY7-2|TENT2	REV__nc|ENSG00000164329|Q6PIY7-2|TENT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.7952880859375	2	497.795269	993.575986	0.10323	5.1388E-05	0.97414	0.00048492	1.0774	0.00053631	497.7955420598114	48.958	1.1928	48.952	48.605	49.798	-0.0056381					56	26	3	0	0	0	0.86288	1	4047	4047		26.796	0	1	455850	+		8722	21071	6133	6139	10017	10017					0.0789407426799471
FHKIIAAN	8	Unmodified	_FHKIIAAN_					0	0	0			REV__ENST00000598218.1_1_19:39823656-39826616:-|nuORF	REV__ENST00000598218.1_1_19:39823656-39826616:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26336669921875	2	457.266345	912.518136	-1.1625	-0.00053158	-3.3651	-0.0015388	-4.5277	-0.0020703	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.87922	1	7721	7721		31.955	2.8053	1	4732500	+		8723	29281	6134	6140	10018	10018					0.05837812342554116
FHKKVGKL	8	Unmodified	_FHKKVGKL_					0	0	0		ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8077697753906	2	478.805637	955.596721	-1.7576	-0.00084154	2.8169	0.0013487	1.0593	0.0005072	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.80706	1	2374	2374		19.36	1.0356	1	336090			8724	5162	6135	6141	10019	10019					0.11714664647661266
FHKQDPQRW	9	Unmodified	_FHKQDPQRW_					0	0	0			REV__ENST00000475645.1_1_6:106634265-106634361:-|nuORF	REV__ENST00000475645.1_1_6:106634265-106634361:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3153686523438	2	621.312346	1240.61014	-0.53876	-0.00033474	2.8585	0.001776	2.3197	0.0014413	621.3138153690339	68.785	0.47818	68.85	68.627	69.105	0.065506					44	20	3	0	0	0	0.69624	1	6171	6171		40.778	1.5253	1	147770	+		8725	27321	6136	6142	10020	10020					-0.0005412931104729068
FHKVVRLPLRY	11	Unmodified	_FHKVVRLPLRY_					0	0	0			REV__ENSG00000102962|ENST00000219235|CCL22	REV__ENSG00000102962|ENST00000219235|CCL22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6236877441406	3	476.625984	1426.85612	-1.6911	-0.000806	-3.0916	-0.0014735	-4.7826	-0.0022795	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.76579	2	12207	12207;12445		18.531	1.3643	1	2577100	+		8726	17374	6137	6143	10021;10022	10021					0.1597699053879751
FHLDLLLI	8	Unmodified	_FHLDLLLI_					0	0	0		nc|ENSG00000164889|P04920-2|SLC4A2;nc|ENSG00000164889|P04920-3|SLC4A2;ENSG00000164889|ENST00000413384|SLC4A2;nc|ENSG00000114923|P48751-3|SLC4A3;ENSG00000114923|ENST00000358055|SLC4A3;nc|ENSG00000114923|P48751-2|SLC4A3;ENST00000425141.5_1_2:220498093-220506447:+|nuORF	nc|ENSG00000164889|P04920-2|SLC4A2;nc|ENSG00000114923|P48751-3|SLC4A3	nc|ENSG00000114923|P48751-3|SLC4A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.29791259765625	2	492.299853	982.585153	-0.51073	-0.00025143	-3.9181	-0.0019289	-4.4288	-0.0021803	492.2977647758313	53.848	1.3804	54.432	53.872	55.253	0.58474					77	32	4	0	0	0	0.52826	2	5460	5450;5460		74.517	0	1	1886000			8727	14857;6017	6138	6144	10023;10024	10024					0.09316422833683191
FHLGVKVTD	9	Unmodified	_FHLGVKVTD_					0	0	0			REV__ENST00000478946.1_1_2:74071889-74072120:+|nuORF	REV__ENST00000478946.1_1_2:74071889-74072120:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.280029296875	2	508.282192	1014.54983	-0.39652	-0.00020155	-3.6656	-0.0018632	-4.0621	-0.0020647	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.76764	1	8772	8772		34.173	0.65696	1	2080300	+		8728	27391	6139	6145	10025	10025					0.04313760305853975
FHLGVKVTD	9	Unmodified	_FHLGVKVTD_					0	0	0			REV__ENST00000478946.1_1_2:74071889-74072120:+|nuORF	REV__ENST00000478946.1_1_2:74071889-74072120:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2796936035156	2	508.282192	1014.54983	-1.5862	-0.00080625	-2.312	-0.0011752	-3.8982	-0.0019814	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.69914	1	8651	8651		40.573	4.9543	1	1814000	+		8729	27391	6139	6145	10026	10026					0.04313760305853975
FHLGVKVTD	9	Unmodified	_FHLGVKVTD_					0	0	0			REV__ENST00000478946.1_1_2:74071889-74072120:+|nuORF	REV__ENST00000478946.1_1_2:74071889-74072120:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2798156738281	2	508.282192	1014.54983	-0.38511	-0.00019575	-3.5589	-0.0018089	-3.944	-0.0020047	508.28029410514995	88.272	2.579	88.735	87.686	90.265	0.46312					198	63	4	0	0	0	0.62081	1	10382	10382		45.952	1.5748	1	2008000	+		8730	27391	6139	6145	10027	10027					0.04313760305853975
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7954406738281	2	491.795269	981.575986	-1.6029	-0.00078829	2.358	0.0011597	0.75513	0.00037137	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.85277	2	3409	3330;3409		31.955	5.1588	1	603870	+		8731	27005	6140	6146	10028;10029	10029					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.795654296875	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.884	1	3569	3569		33.516	6.7195	1	2891800	+		8732	27005	6140	6146	10030	10030					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79559326171875	2	491.795269	981.575986	0.21767	0.00010705	0.41627	0.00020472	0.63394	0.00031177	491.79537288056144	45.526	1.3498	45.507	44.705	46.055	-0.018581					75	31	3	0	0	0	0.884	1	3588	3588		33.516	5.2613	1	529090	+		8733	27005	6140	6146	10031	10031					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7961120605469	2	491.795269	981.575986	0.09879	4.8585E-05	0.95013	0.00046727	1.0489	0.00051585	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.85277	4	3967	3955;3967;4003;4114		40.573	7.057	1	1349600	+		8734	27005	6140	6146	10032;10033;10034;10035	10033					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7959289550781	2	491.795269	981.575986	-0.0088364	-4.3457E-06	1.0535	0.0005181	1.0447	0.00051376	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.85277	1	4734	4734		25.45	4.5032	1	782460	+		8735	27005	6140	6146	10036	10036					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79571533203125	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.85277	1	4226	4226		25.45	3.7478	1	1111900	+		8736	27005	6140	6146	10037	10037					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7959289550781	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.91005	1	4723	4723		42.474	0	1	792830	+		8737	27005	6140	6146	10038	10038					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7957763671875	2	491.795269	981.575986	-0.36021	-0.00017715	1.3022	0.0006404	0.94195	0.00046325	491.79587618632917	55.368	1.5692	55.341	54.702	56.271	-0.027279					123	47	4	0	0	0	0.86288	2	5116	5076;5116		33.516	3.0119	1	1374900	+		8738	27005	6140	6146	10039;10040	10040					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958068847656	2	491.795269	981.575986	-1.7512	-0.00086123	2.5855	0.0012715	0.83426	0.00041029	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.86288	1	3802	3802		26.796	1.3459	1	2627300	+		8739	27005	6140	6146	10041	10041					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958679199219	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.81548	3	3968	3968;4019;4174		35.201	1.3459	1	1232600	+		8740	27005	6140	6146	10042;10043;10044	10042					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958068847656	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.884	1	3498	3498		33.516	6.7195	1	2747400	+		8741	27005	6140	6146	10045	10045					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958679199219	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.86288	1	3705	3705		26.796	0.10319	1	1219600	+		8742	27005	6140	6146	10046	10046					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79559326171875	2	491.795269	981.575986	-0.71044	-0.00034939	1.6504	0.00081164	0.93993	0.00046225	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.87922	1	4151	4151		31.955	6.3808	1	571510	+		8743	27005	6140	6146	10047	10047					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79583740234375	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.85277	1	4686	4686		25.45	2.4077	1	1759500	+		8744	27005	6140	6146	10048	10048					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957763671875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.845	1	56.917	56.417	57.417	0.071835								0	0	0	0.30125	1	4795	4795		20.482	2.1574	1		+		8745	27005	6140	6146	10049	10049					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7959289550781	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.884	2	3444	3426;3444		35.201	6.9464	1	3201400	+		8746	27005	6140	6146	10050;10051	10051					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956848144531	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.884	1	3685	3685		33.516	5.2613	1	1346800	+		8747	27005	6140	6146	10052	10052					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957763671875	2	491.795269	981.575986	0.39746	0.00019547	1.1003	0.00054113	1.4978	0.0007366	491.7957851283323	56.607	1.0536	56.706	56.448	57.502	0.099186					72	48	2	0	0	0	0.87922	1	4792	4792		31.955	7.7521	1	1076800	+		8748	27005	6140	6146	10053	10053					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958068847656	2	491.795269	981.575986	-0.17405	-8.5598E-05	1.0809	0.00053159	0.90686	0.00044599	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.85277	3	3403	3403;3456;3525		31.955	6.5047	1	2994900	+		8749	27005	6140	6146	10054;10055;10056	10054					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7957763671875	2	491.795269	981.575986	-0.41148	-0.00020237	1.3216	0.00064997	0.91013	0.0004476	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.86288	1	4446	4446		26.796	0	1	887820	+		8750	27005	6140	6146	10057	10057					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7944030761719	2	491.795269	981.575986	-1.0095	-0.00049646	1.2929	0.00063585	0.28344	0.00013939	491.79577391563464	44.834	1.3425	45.297	44.375	45.717	0.46313					102	32	4	0	0	0	0.8347	1	4051	4051		23.042	1.3402	1	7709100	+		8751	27005	6140	6146	10058	10058					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.78973388671875	2	491.795269	981.575986	-1.9178	-0.00094317	0.68391	0.00033634	-1.2339	-0.00060683	491.795512765235	43.373	1.1256	44.147	43.54	44.665	0.77379					67	27	3	0	0	0	0.87479	1	3940	3940		30.504	5.0535	1	1540600	+		8752	27005	6140	6146	10059	10059					0.08446074267988024
FHLISPLR	8	Unmodified	_FHLISPLR_					0	0	0			REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	REV__ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7961730957031	2	491.795269	981.575986	-0.85536	-0.00042066	1.576	0.00077505	0.72059	0.00035438	491.79594594464555	45.253	0.48487	46.149	45.883	46.368	0.89542					30	11	3	0	0	0	0.91977	1	4196	4196		45.952	12.436	1	6858700	+		8753	27005	6140	6146	10060	10060					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79571533203125	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.86791	2	3501	3501;3635		31.955	7.7724	1	2891800			8754	12514	6141	6147	10061;10062	10061					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.795654296875	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.884	1	3954	3954		33.516	4.366	1	1240000			8755	12514	6141	6147	10063	10063					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7957763671875	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.81548	1	4375	4375		20.482	0	1	781720			8756	12514	6141	6147	10064	10064					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7956237792969	2	491.795269	981.575986	0.21767	0.00010705	0.41627	0.00020472	0.63394	0.00031177	491.79537288056144	45.526	1.3498	45.507	44.705	46.055	-0.018581					75	31	3	0	0	0	0.86791	1	3612	3612		28.254	2.8041	1	529090			8757	12514	6141	6147	10065	10065					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7957458496094	2	491.795269	981.575986	0.16895	8.3091E-05	0.70742	0.00034791	0.87638	0.000431	491.795491652363	46.653	1.8507	46.639	45.976	47.827	-0.013821					152	52	4	0	0	0	0.86791	2	3778	3778;3852		31.955	1.4512	1	2674700			8758	12514	6141	6147	10066;10067	10066					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7958984375	2	491.795269	981.575986	0.09879	4.8585E-05	0.95013	0.00046727	1.0489	0.00051585	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.86791	2	4184	4184;4294		40.573	7.057	1	1349600			8759	12514	6141	6147	10068;10069	10068					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7960205078125	2	491.795269	981.575986	-0.0088364	-4.3457E-06	1.0535	0.0005181	1.0447	0.00051376	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.86791	2	4713	4688;4713		35.201	3.2459	1	782460			8760	12514	6141	6147	10070;10071	10071					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79541015625	2	491.795269	981.575986	-0.035071	-1.7248E-05	1.1757	0.00057819	1.1406	0.00056094	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.85277	2	5028	4894;5028		33.516	3.0119	1	1625300			8761	12514	6141	6147	10072;10073	10073					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7956848144531	2	491.795269	981.575986	-0.75954	-0.00037354	1.5722	0.0007732	0.81265	0.00039966	491.7959244094971	46.601	1.9125	46.572	45.843	47.756	-0.028782					158	52	4	0	0	0	0.884	3	3824	3824;3870;3883		37.028	4.366	1	3015000			8762	12514	6141	6147	10074;10075;10076	10074					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7957458496094	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.89457	1	4286	4286		37.028	0	1	1111900			8763	12514	6141	6147	10077	10077					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7955322265625	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.85277	2	4839	4839;4905		38.806	6.8513	1	792830			8764	12514	6141	6147	10078;10079	10078					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958984375	2	491.795269	981.575986	-2.3785	-0.0011697	1.9836	0.00097551	-0.39493	-0.00019422	491.79615834302405	43.462	1.3116	43.459	43.021	44.333	-0.0024452					60	31	3	0	0	0	0.87922	1	3323	3323		31.955	1.4512	1	272230			8765	12514	6141	6147	10080	10080					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.796142578125	2	491.795269	981.575986	-1.7512	-0.00086123	2.5855	0.0012715	0.83426	0.00041029	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.86791	3	3846	3837;3846;3856		37.028	3.5129	1	2627300			8766	12514	6141	6147	10081;10082;10083	10082					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79541015625	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.87479	2	4125	4125;4210		33.516	5.6333	1	1232600			8767	12514	6141	6147	10084;10085	10084					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7959899902344	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.87479	1	4783	4783		30.504	3.7075	1	703950			8768	12514	6141	6147	10086	10086					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7955627441406	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.84341	1	3739	3739		24.203	1.1603	1	1219600			8769	12514	6141	6147	10087	10087					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79571533203125	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.86791	1	3466	3466		28.254	2.8041	1	3201400			8770	12514	6141	6147	10088	10088					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7958068847656	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.81548	2	4642	4600;4642		25.45	2.1574	1	2075300			8771	12514	6141	6147	10089;10090	10090					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7956848144531	2	491.795269	981.575986	-0.17405	-8.5598E-05	1.0809	0.00053159	0.90686	0.00044599	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.89457	1	3423	3423		37.028	8.7742	1	2994900			8772	12514	6141	6147	10091	10091					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7955322265625	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.85277	1	3865	3865		25.45	6.0902	1	1502200			8773	12514	6141	6147	10092	10092					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7956237792969	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.93529	1	4054	4054		52.299	7.7681	1	412030			8774	12514	6141	6147	10093	10093					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7960205078125	2	491.795269	981.575986	-0.41148	-0.00020237	1.3216	0.00064997	0.91013	0.0004476	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.884	1	4314	4314		33.516	0	1	887820			8775	12514	6141	6147	10094	10094					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958679199219	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.86791	1	4635	4635		28.254	0	1	1898900			8776	12514	6141	6147	10095	10095					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7878723144531	2	491.795269	981.575986	-1.9178	-0.00094317	0.68391	0.00033634	-1.2339	-0.00060683	491.795512765235	43.373	1.1256	44.147	43.54	44.665	0.77379					67	27	3	0	0	0	0.81548	1	3953	3953		20.482	1.1219	1	1540600			8777	12514	6141	6147	10096	10096					0.08446074267988024
FHLLLRSP	8	Unmodified	_FHLLLRSP_					0	0	0		ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7959899902344	2	491.795269	981.575986	-0.16137	-7.9361E-05	1.242	0.0006108	1.0806	0.00053144	491.795730554191	52.394	1.7298	53.062	52.517	54.247	0.6673					112	41	4	0	0	0	0.86791	1	5305	5305		28.254	0	1	2437000			8778	12514	6141	6147	10097	10097					0.08446074267988024
FHLLREVL	8	Unmodified	_FHLLREVL_					0	0	0		ENSG00000147571|ENST00000276571|CRH	ENSG00000147571|ENST00000276571|CRH	ENSG00000147571|ENST00000276571|CRH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8090209960938	2	513.808377	1025.6022	-1.3833	-0.00071076	2.6514	0.0013623	1.2681	0.00065157	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.85277	1	4310	4310		25.45	2.4077	1	1148600			8779	4911	6142	6148	10098	10098					0.09042343439477918
FHLLREVL	8	Unmodified	_FHLLREVL_					0	0	0		ENSG00000147571|ENST00000276571|CRH	ENSG00000147571|ENST00000276571|CRH	ENSG00000147571|ENST00000276571|CRH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8081665039062	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.85277	1	4653	4653		25.45	0.93098	1	771120			8780	4911	6142	6148	10099	10099					0.09042343439477918
FHLLVTVSL	9	Unmodified	_FHLLVTVSL_					0	0	0		nc|ENSG00000183023|P32418-2|SLC8A1;nc|ENSG00000183023|P32418-3|SLC8A1;nc|ENSG00000183023|P32418-4|SLC8A1;nc|ENSG00000183023|P32418-5|SLC8A1;ENSG00000183023|ENST00000332839|SLC8A1	nc|ENSG00000183023|P32418-2|SLC8A1	nc|ENSG00000183023|P32418-2|SLC8A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.2979125976562	2	514.810585	1027.60662	0.76224	0.00039241	2.6553	0.001367	3.4175	0.0017594	514.8133209954559	96.405	1.1209	96.452	95.922	97.043	0.047798					32	25	2	0	0	0	0.20789	1	10231	10231		33.516	0	1	133270			8781	7494	6143	6149	10100	10100					0.09391807862357382
FHLPLTLR	8	Unmodified	_FHLPLTLR_					0	0	0			REV__ENST00000591716.6_1_19:35651643-35657154:+|nuORF	REV__ENST00000591716.6_1_19:35651643-35657154:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.80340576171875	2	498.803094	995.591636	-1.4653	-0.00073091	2.6111	0.0013024	1.1457	0.00057149	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.86791	3	4271	4271;4294;4315		35.201	0.37203	1	2964600	+		8782	29200	6144	6150	10101;10102;10103	10101					0.09366360785043071
FHLPLTLR	8	Unmodified	_FHLPLTLR_					0	0	0			REV__ENST00000591716.6_1_19:35651643-35657154:+|nuORF	REV__ENST00000591716.6_1_19:35651643-35657154:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8034362792969	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.90465	1	4555	4555		40.573	0	1	2118300	+		8783	29200	6144	6150	10104	10104					0.09366360785043071
FHLPLTLR	8	Unmodified	_FHLPLTLR_					0	0	0			REV__ENST00000591716.6_1_19:35651643-35657154:+|nuORF	REV__ENST00000591716.6_1_19:35651643-35657154:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8028869628906	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.86288	1	4637	4637		26.796	1.3459	1	2702800	+		8784	29200	6144	6150	10105	10105					0.09366360785043071
FHLPLTLR	8	Unmodified	_FHLPLTLR_					0	0	0			REV__ENST00000591716.6_1_19:35651643-35657154:+|nuORF	REV__ENST00000591716.6_1_19:35651643-35657154:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.8035583496094	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.87922	1	4210	4210		31.955	0	1	2538600	+		8785	29200	6144	6150	10106	10106					0.09366360785043071
FHLQNDPP	8	Unmodified	_FHLQNDPP_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.2359619140625	2	484.235242	966.45593	-0.75975	-0.0003679	2.3533	0.0011396	1.5936	0.00077166	484.23638529318964	84.866	0.60439	85.042	84.661	85.265	0.17561					46	13	5	0	0	0	0.90465	1	8257	8257		40.573	1.7665	1	1728500			8786	1075	6145	6151	10107	10107					-0.028639587964448765
FHLQNDPP	8	Unmodified	_FHLQNDPP_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.2366943359375	2	484.235242	966.45593	-1.5815	-0.0007658	3.8906	0.0018839	2.3091	0.0011181	484.23719885944524	85.495	1.1033	85.654	85.329	86.432	0.15851					89	25	5	0	0	0	0.92973	1	8313	8313		50.025	0.58299	1	6888300			8787	1075	6145	6151	10108	10108					-0.028639587964448765
FHLQNDPP	8	Unmodified	_FHLQNDPP_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.23614501953125	2	484.235242	966.45593	-1.6244	-0.00078657	2.7263	0.0013202	1.1019	0.00053358	484.2368830443012	86.725	1.2091	86.89	86.438	87.647	0.16473					75	27	5	0	0	0	0.92973	1	8499	8499		50.025	4.0726	1	4385600			8788	1075	6145	6151	10109	10109					-0.028639587964448765
FHLQNDPP	8	Unmodified	_FHLQNDPP_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2362365722656	2	484.235242	966.45593	-0.25899	-0.00012541	1.9723	0.00095505	1.7133	0.00082964	484.2362631686429	84.254	0.98042	84.689	83.918	84.898	0.43537					86	23	5	0	0	0	0.92973	1	9767	9767		50.025	2.1089	1	12890000			8789	1075	6145	6151	10110	10110					-0.028639587964448765
FHLQNDPP	8	Unmodified	_FHLQNDPP_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.236083984375	2	484.235242	966.45593	0.39552	0.00019152	1.1289	0.00054667	1.5245	0.0007382	484.23583864352696	86.77	1.4541	87.217	86.978	88.432	0.44629					87	34	4	0	0	0	0.90465	1	10177	10177		40.573	3.4135	1	8816400			8790	1075	6145	6151	10111	10111					-0.028639587964448765
FHLQNDPP	8	Unmodified	_FHLQNDPP_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2363586425781	2	484.235242	966.45593	-0.37908	-0.00018357	1.9463	0.00094247	1.5672	0.00075891	484.2364959781966	84.251	0.72864	84.698	84.224	84.952	0.44736					63	17	5	0	0	0	0.92973	2	9800	9800;9809		50.025	4.0726	1	11473000			8791	1075	6145	6151	10112;10113	10112					-0.028639587964448765
FHLQNDPP	8	Unmodified	_FHLQNDPP_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2367248535156	2	484.235242	966.45593	-0.53754	-0.00026029	1.2282	0.00059475	0.69069	0.00033445	484.2362894528465	84.849	1.2824	85.296	84.912	86.194	0.44736					130	31	5	0	0	0	0.79403	2	10001	9916;10001		63.306	10.37	1	48085000			8792	1075	6145	6151	10114;10115	10115					-0.028639587964448765
FHLVLRNL	8	Unmodified	_FHLVLRNL_					0	0	0		ENST00000413209.6_1_22:30092452-30092572:+|nuORF	ENST00000413209.6_1_22:30092452-30092572:+|nuORF	ENST00000413209.6_1_22:30092452-30092572:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.3067321777344	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.506	1	42.939	42.439	43.439	0.4334								0	0	0	0.29353	1	3791	3791		28.254	1.4582	1				8793	11346	6146	6152	10116	10116					0.09765763159327889
FHNQPEVKL	9	Unmodified	_FHNQPEVKL_					0	0	0			REV__nc|ENSG00000187605|O43151-2|TET3	REV__nc|ENSG00000187605|O43151-2|TET3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.3005981445312	2	556.298373	1110.58219	-0.90792	-0.00050507	0.81014	0.00045068	-0.097784	-5.4397E-05	556.2986094820882	75.928	0.56037	75.977	75.736	76.296	0.049194					26	15	2	0	0	0	0.75725	1	7336	7336		36.447	0	1	142750	+		8794	22926	6147	6153	10117	10117					0.03132547708855782
FHPDCLQML	9	Unmodified	_FHPDCLQML_					0	0	0		nc|ENSG00000124092|Q8NI51-9|CTCFL	nc|ENSG00000124092|Q8NI51-9|CTCFL	nc|ENSG00000124092|Q8NI51-9|CTCFL	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.2536010742188	2	552.254262	1102.49397	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.109	1	81.253	80.753	81.753	0.14352								0	0	0	0.2969	1	7760	7760		31.955	1.6371	1				8795	14886	6148	6154	10118	10118					-0.05317532197636865
FHPSFNKG	8	Unmodified	_FHPSFNKG_					0	0	0		nc|ENSG00000094914|Q9NRG9-2|AAAS;ENSG00000094914|ENST00000209873|AAAS	nc|ENSG00000094914|Q9NRG9-2|AAAS	nc|ENSG00000094914|Q9NRG9-2|AAAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.2333679199219	2	467.232502	932.450451	-1.0177	-0.00047551	2.7557	0.0012876	1.738	0.00081207	467.2337824408168	68.11	1.4648	68.17	67.783	69.248	0.059288					157	61	4	0	0	0	0.93529	1	6081	6081		52.299	7.922	1	2841300			8796	1714	6149	6155	10119	10119					-0.018476375882301
FHPVLRKSKC	10	Unmodified	_FHPVLRKSKC_					0	0	0		ENST00000329082.11_1_15:93587474-93587648:-|nuORF	ENST00000329082.11_1_15:93587474-93587648:-|nuORF	ENST00000329082.11_1_15:93587474-93587648:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5656433105469	3	405.565737	1213.67538	-1.5858	-0.00064316	-0.95615	-0.00038778	-2.542	-0.0010309	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.85834	1	5227	5227		22.58	4.7465	1	181560			8797	10096	6150	6156	10120	10120					0.07709148890421602
FHQLVERA	8	Unmodified	_FHQLVERA_					0	0	0		ENST00000372232.7_1_X:107372037-107374546:+|nuORF	ENST00000372232.7_1_X:107372037-107374546:+|nuORF	ENST00000372232.7_1_X:107372037-107374546:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.267333984375	2	500.272158	998.529764	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.701	1	77.27	76.77	77.77	0.56836								0	0	0	0.29344	1	8743	8743		31.955	6.5047	1				8798	10691	6151	6157	10121	10121					0.030440093659080958
FHRLVVRRLG	10	Unmodified	_FHRLVVRRLG_					0	0	0		ENST00000265748.6_2_7:36429459-36435956:+|nuORF	ENST00000265748.6_2_7:36429459-36435956:+|nuORF	ENST00000265748.6_2_7:36429459-36435956:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.26544189453125	3	418.263157	1251.76764	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.858	1	49.765	49.265	50.265	-0.093178								0	0	0	0.45132	1	3884	3884		20.837	0.80668	1				8799	9514	6152	6158	10122	10122					0.15182995018972179
FHRQLLYL	8	Unmodified	_FHRQLLYL_					0	0	0		nc|nan|Q8N4M7|C10orf126	nc|nan|Q8N4M7|C10orf126	nc|nan|Q8N4M7|C10orf126	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3165283203125	2	545.313826	1088.6131	1.9901	0.0010853	3.2821	0.0017898	5.2723	0.0028751	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.88915	1	9265	9265		35.201	3.2459	1	4704900			8800	15371	6153	6159	10123	10123					0.0723374581373264
FHRQLLYL	8	Unmodified	_FHRQLLYL_					0	0	0		nc|nan|Q8N4M7|C10orf126	nc|nan|Q8N4M7|C10orf126	nc|nan|Q8N4M7|C10orf126	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.316650390625	2	545.313826	1088.6131	1.1684	0.00063715	4.0853	0.0022278	5.2537	0.0028649	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.93529	1	9125	9125		52.299	15.14	1	4705800			8801	15371	6153	6159	10124	10124					0.0723374581373264
FHRQLVLI	8	Unmodified	_FHRQLVLI_					0	0	0			REV__ENST00000397885.2_1_9:2837287-2844066:-|nuORF	REV__ENST00000397885.2_1_9:2837287-2844066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.317626953125	2	513.316369	1024.61818	-0.36813	-0.00018897	1.0583	0.00054322	0.69013	0.00035425	513.3169589115231	53.646	1.4284	53.622	52.782	54.21	-0.024754					61	35	3	0	0	0	0.83466	1	4805	4805		23.037	3.6767	1	246220	+		8802	26184	6154	6160	10125	10125					0.10686049676360199
FHRVVEIL	8	Unmodified	_FHRVVEIL_					0	0	0		nc|ENSG00000151445|Q9H9C1-2|VIPAS39;ENSG00000151445|ENST00000557658|VIPAS39	nc|ENSG00000151445|Q9H9C1-2|VIPAS39	nc|ENSG00000151445|Q9H9C1-2|VIPAS39	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.79998779296875	2	506.800552	1011.58655	-1.5362	-0.00077856	2.1529	0.0010911	0.61671	0.00031255	506.8015777288388	44.442	2.8102	44.442	42.605	45.415	0					120	68	3	0	0	0	0.884	1	3275	3275		33.516	0	1	386210			8803	5117	6155	6161	10126	10126					0.0812205692243424
FHSLAIRG	8	Unmodified	_FHSLAIRG_					0	0	0		ENSG00000186666|ENST00000333924|BCDIN3D	ENSG00000186666|ENST00000333924|BCDIN3D	ENSG00000186666|ENST00000333924|BCDIN3D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7544860839844	2	450.756144	899.497735	0.36741	0.00016561	-4.3298	-0.0019517	-3.9623	-0.0017861	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.87064	1	7981	7981		29.15	4.9468	1	394230			8804	7810	6156	6162	10127	10127					0.043966416827515786
FHSLLPRI	8	Unmodified	_FHSLLPRI_					0	0	0			REV__ENST00000264934.5_1_5:32230418-32242200:-|nuORF	REV__ENST00000264934.5_1_5:32230418-32242200:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7959899902344	2	491.795269	981.575986	-1.0095	-0.00049646	1.2929	0.00063585	0.28344	0.00013939	491.79577391563464	44.834	1.3425	45.297	44.375	45.717	0.46313					102	32	4	0	0	0	0.86288	1	4189	4189		26.796	1.3459	1	7709100	+		8805	24482	6157	6163	10128	10128					0.08446074267999393
FHTAAVHCL	9	Unmodified	_FHTAAVHCL_					0	0	0			REV__ENST00000361910.8_1_X:100870955-100871015:-|nuORF	REV__ENST00000361910.8_1_X:100870955-100871015:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.7462463378906	2	499.747462	997.480371	-0.072024	-3.5994E-05	-1.4251	-0.00071218	-1.4971	-0.00074818	499.7467280692381	68.276	1.7033	68.661	68.028	69.731	0.38482					79	40	4	0	0	0	0.67235	1	7500	7500		42.474	3.6683	1	539910	+		8806	25516	6158	6164	10129	10129					-0.018470219145683586
FHTLRPSD	8	Unmodified	_FHTLRPSD_					0	0	0		ENSG00000103326|ENST00000219611|CAPN15	ENSG00000103326|ENST00000219611|CAPN15	ENSG00000103326|ENST00000219611|CAPN15	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.2665710449219	2	486.748516	971.482479	1.1879	0.00057823	-1.5943	-0.00077604	-0.40641	-0.00019782	486.74581977151263	87.836	0.30502	87.762	87.681	87.986	-0.074005					8	6	2	0	0	0	0.4196	1	9110	9110		44.117	26.752	1	26923			8807	2074	6159	6165	10130	10130					-0.004402699050956471
FHVKLQIQ	8	Unmodified	_FHVKLQIQ_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7999267578125	2	506.800552	1011.58655	0.18992	9.6251E-05	0.88652	0.00044929	1.0764	0.00054554	506.80099089303076	46.969	1.4152	46.955	46.233	47.648	-0.013817					58	38	2	0	0	0	0.81548	1	3786	3786		20.482	2.1574	1	254450			8808	8534	6160	6166	10131	10131					0.0812205692243424
FHVKLQIQ	8	Unmodified	_FHVKLQIQ_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8001708984375	2	506.800552	1011.58655	-0.4991	-0.00025294	1.3209	0.00066945	0.82183	0.00041651	506.8011482581911	44.494	2.6105	44.503	42.78	45.391	0.0084534					109	64	3	0	0	0	0.90465	1	3237	3237		40.573	11.403	1	373670			8809	8534	6160	6166	10132	10132					0.0812205692243424
FHVKRVEKT	9	Unmodified	_FHVKRVEKT_					0	0	0			REV__nc|ENSG00000162148|Q7Z5V6-2|SAXO4	REV__nc|ENSG00000162148|Q7Z5V6-2|SAXO4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.3331298828125	2	572.33529	1142.65603	0.64008	0.00036634	-3.7969	-0.0021731	-3.1568	-0.0018068	572.3324368602474	15.962	0.17459	15.364	15.248	15.422	-0.59873					5	3	2	0	0	0	0.69624	1	74	74		40.778	5.6261	1	21417	+		8810	20799	6161	6167	10133	10133					0.09040515871174648
FHVRELVL	8	Unmodified	_FHVRELVL_					0	0	0			REV__ENST00000543754.1_1_12:132425763-132428128:+|nuORF	REV__ENST00000543754.1_1_12:132425763-132428128:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8005676269531	2	506.800552	1011.58655	-1.4111	-0.00071517	2.7469	0.0013921	1.3357	0.00067695	506.8018835594655	53.182	1.0826	53.182	52.473	53.556	0					55	30	2	0	0	0	0.84341	1	4392	4392		24.203	2.2429	1	130290	+		8811	22189	6162	6168	10134	10134					0.08122056922411502
FHVRELVL	8	Unmodified	_FHVRELVL_					0	0	0			REV__ENST00000543754.1_1_12:132425763-132428128:+|nuORF	REV__ENST00000543754.1_1_12:132425763-132428128:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8020324707031	2	506.800552	1011.58655	-0.4991	-0.00025294	1.3209	0.00066945	0.82183	0.00041651	506.8011482581911	44.494	2.6105	44.503	42.78	45.391	0.0084534					109	64	3	0	0	0	0.8347	1	3249	3249		23.042	1.0826	1	373670	+		8812	22189	6162	6168	10135	10135					0.08122056922411502
FHVRELVL	8	Unmodified	_FHVRELVL_					0	0	0			REV__ENST00000543754.1_1_12:132425763-132428128:+|nuORF	REV__ENST00000543754.1_1_12:132425763-132428128:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.80206298828125	2	506.800552	1011.58655	-0.48557	-0.00024609	1.7036	0.00086341	1.2181	0.00061732	506.80138318270446	52.994	1.2868	53.041	52.134	53.421	0.047806					70	43	2	0	0	0	0.85277	1	4289	4289		25.45	1.2474	1	144880	+		8813	22189	6162	6168	10136	10136					0.08122056922411502
FHVRELVL	8	Unmodified	_FHVRELVL_					0	0	0			REV__ENST00000543754.1_1_12:132425763-132428128:+|nuORF	REV__ENST00000543754.1_1_12:132425763-132428128:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.80419921875	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.865	1	55.828	55.328	56.328	-0.036827								0	0	0	0.29344	1	4701	4701		31.955	3.7006	1		+		8814	22189	6162	6168	10137	10137					0.08122056922411502
FHVVHTPPL	9	Unmodified	_FHVVHTPPL_					0	0	0		ENSG00000180644|ENST00000441259|PRF1	ENSG00000180644|ENST00000441259|PRF1	ENSG00000180644|ENST00000441259|PRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.793701171875	2	523.792727	1045.5709	0.20589	0.00010784	2.1217	0.0011113	2.3276	0.0012192	523.7937468382506	19.848	1.1814	19.218	18.937	20.118	-0.6296					65	25	3	0	0	0	0.76402	1	598	598		35.201	14.719	1	863270			8815	7338	6163	6169	10138	10138					0.049937704053718335
FIACVILPV	9	Unmodified	_FIACVILPV_					0	0	0			REV__ENSG00000168615|ENST00000487273|ADAM9	REV__ENSG00000168615|ENST00000487273|ADAM9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7909851074219	2	487.790807	973.56706	-0.48923	-0.00023864	0.15358	7.4913E-05	-0.33565	-0.00016373	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.72098	1	9746	9746		39.021	8.5179	1	1599600	+		8816	21505	6164	6170	10139	10139					0.0792196458729677
FIAPTGHSL	9	Unmodified	_FIAPTGHSL_					0	0	0		ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;ENSG00000125354|ENST00000394610|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	ENSG00000138758|ENST00000264893|SEPTIN11	ENSG00000138758|ENST00000264893|SEPTIN11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.7557678222656	2	471.75581	941.497067	-0.89746	-0.00042338	0.72418	0.00034164	-0.17328	-8.1746E-05	471.75606016299184	47.417	1.8573	47.889	47.099	48.956	0.47139					122	45	4	0	0	0	0.034856	4	4512	4488;4500;4512;4524		115.46	33.154	1	13139000			8817	4326	6165	6171	10140;10141;10142;10143	10142					0.023978022430469537
FIAPTGHSL	9	Unmodified	_FIAPTGHSL_					0	0	0		ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;ENSG00000125354|ENST00000394610|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6	ENSG00000138758|ENST00000264893|SEPTIN11	ENSG00000138758|ENST00000264893|SEPTIN11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7554931640625	2	471.75581	941.497067	-1.7187	-0.00081082	1.5178	0.00071605	-0.2009	-9.4777E-05	471.75642245917805	47.223	1.5428	48.147	47.519	49.062	0.92315					102	37	4	0	0	0	0.034856	6	4490	4479;4490;4502;4514;4526;4540		115.46	33.154	1	12896000			8818	4326	6165	6171	10144;10145;10146;10147;10148;10149	10145					0.023978022430469537
FICKVHVLY	9	Unmodified	_FICKVHVLY_					0	0	0			REV__ENST00000454786.5_1_2:238896607-238903439:+|nuORF	REV__ENST00000454786.5_1_2:238896607-238903439:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.8119506835938	2	561.312438	1120.61032	-0.34102	-0.00019142	-2.5332	-0.0014219	-2.8743	-0.0016134	561.8121876312182	60.416	1.3094	60.806	60.013	61.322	0.38945					62	35	3	0	0	0	0.69914	1	6454	6454		40.573	1.7665	1	1336500	+		8819	26932	6166	6172	10150	10150					0.05484154364580718
FIDCSRSEEK	10	Unmodified	_FIDCSRSEEK_					0	0	0			REV__nc|ENSG00000133119|P40938-2|RFC3	REV__nc|ENSG00000133119|P40938-2|RFC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	607.2787475585938	2	607.27952	1212.54449	-0.092727	-5.6311E-05	-2.1509	-0.0013062	-2.2437	-0.0013625	607.2780367391019	43.566	0.35947	43.539	43.446	43.805	-0.026764					13	8	2	0	0	0	0.8545	1	3349	3349		36.447	0.82846	1	92071	+		8820	29851	6167	6173	10151	10151					-0.05328331338932912
FIDPTQLPY	9	Unmodified	_FIDPTQLPY_					0	0	0		ENST00000513609.1_1_5:149441181-149446609:-|nuORF;ENSG00000182578|ENST00000675795|CSF1R	ENST00000513609.1_1_5:149441181-149446609:-|nuORF	ENST00000513609.1_1_5:149441181-149446609:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.282470703125	2	547.281857	1092.54916	-0.41689	-0.00022816	-3.494	-0.0019122	-3.9108	-0.0021403	547.2798598639519	53.447	0.79269	54.062	53.696	54.489	0.61436					32	18	2	0	0	0	0.30689	1	5440	5440		64.207	4.089	1	729980			8821	7463	6168	6174	10152	10152					0.006589208661580415
FIEGGITSEQF	11	Unmodified	_FIEGGITSEQF_					0	0	0			REV__ENST00000476544.1_1_3:19992384-19992582:+|nuORF	REV__ENST00000476544.1_1_3:19992384-19992582:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	614.2987670898438	2	614.298236	1226.58192	-0.5069	-0.00031139	0.72145	0.00044319	0.21455	0.0001318	614.2986837504682	76.339	0.62624	76.339	75.958	76.584	0					57	22	3	0	0	0	0.51007	1	6939	6939		51.193	5.2204	1	280640	+		8822	27339	6169	6175	10153	10153					-0.02230916801681815
FIEGGITSEQF	11	Unmodified	_FIEGGITSEQF_					0	0	0			REV__ENST00000476544.1_1_3:19992384-19992582:+|nuORF	REV__ENST00000476544.1_1_3:19992384-19992582:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	614.2982177734375	2	614.298236	1226.58192	-0.50306	-0.00030903	0.8077	0.00049617	0.30464	0.00018714	614.2986004374294	75.986	0.81822	76.033	75.719	76.538	0.046448					56	25	4	0	0	0	0.65746	1	7428	7428		37.812	0.30334	1	230950	+		8823	27339	6169	6175	10154	10154					-0.02230916801681815
FIEGGITSEQF	11	Unmodified	_FIEGGITSEQF_					0	0	0			REV__ENST00000476544.1_1_3:19992384-19992582:+|nuORF	REV__ENST00000476544.1_1_3:19992384-19992582:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	614.2960815429688	2	614.298236	1226.58192	0.69076	0.00042433	-0.60563	-0.00037204	0.085129	5.2295E-05	614.297808774193	75.94	0.73201	76.073	75.798	76.53	0.13325					52	21	3	0	0	0	0.50531	1	7078	7078		51.528	3.8704	1	454880	+		8824	27339	6169	6175	10155	10155					-0.02230916801681815
FIEGGITSEQF	11	Unmodified	_FIEGGITSEQF_					0	0	0			REV__ENST00000476544.1_1_3:19992384-19992582:+|nuORF	REV__ENST00000476544.1_1_3:19992384-19992582:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	614.2979736328125	2	614.298236	1226.58192	-0.8218	-0.00050483	1.0383	0.00063782	0.21649	0.00013299	614.2987457658554	76.086	0.68958	76.176	75.847	76.537	0.089363					59	22	3	0	0	0	0.48529	1	7085	7085		52.937	3.4007	1	406220	+		8825	27339	6169	6175	10156	10156					-0.02230916801681815
FIELFPWF	8	Unmodified	_FIELFPWF_					0	0	0			REV__ENST00000495068.5_1_15:91478554-91479518:+|nuORF	REV__ENST00000495068.5_1_15:91478554-91479518:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.8294067382812	2	549.786579	1097.5586	-1.7006	-0.00093495	2.0296	0.0011158	0.32899	0.00018087	549.7873796067022	43.323	0.64286	43.756	43.46	44.103	0.4334					33	15	3	0	0	0	0.4196	1	3892	3892		21.702	1.2205	1	672160	+		8826	27729	6170	6176	10157	10157					0.01372733942321247
FIESLNDEEP	10	Unmodified	_FIESLNDEEP_					0	0	0			REV__nc|ENSG00000091656|Q86UP3|ZFHX4	REV__nc|ENSG00000091656|Q86UP3|ZFHX4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.2904663085938	2	596.772051	1191.52955	-0.43742	-0.00026104	-2.9321	-0.0017498	-3.3695	-0.0020108	596.769844330665	28.124	0.25353	28.027	27.84	28.094	-0.096947					8	5	2	0	0	0	0.37624	1	1660	1660		31.53	16.665	1	50344	+		8827	17023	6171	6177	10158	10158					-0.05855499935296393
FIFIAVKKKLK	11	Unmodified	_FIFIAVKKKLK_					0	0	0		ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.63604736328125	3	445.635598	1333.88496	-0.63519	-0.00028306	1.146	0.0005107	0.5108	0.00022763	445.6360586466579	37.863	1.1296	38.176	37.864	38.994	0.31312					138	28	6	0	0	0	0.81021	1	3116	3116		9.2118	1.8121	1	20399000			8828	13292	6172	6178	10159	10159					0.23137715115194624
FIFSFYFPA	9	Unmodified	_FIFSFYFPA_					0	0	0			REV__nc|ENSG00000177054|Q8IUH4-2|ZDHHC13	REV__nc|ENSG00000177054|Q8IUH4-2|ZDHHC13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.7821655273438	2	569.784036	1137.55352	-0.89736	-0.0005113	-3.0637	-0.0017456	-3.961	-0.0022569	569.7821553784117	31.806	0.57995	31.819	31.534	32.114	0.013058					30	13	3	0	0	0	0.76996	1	1771	1771		33.516	1.5607	1	132950	+		8829	22175	6173	6179	10160	10160					-0.009755699202742107
FIGVLYKDKKL	11	Unmodified	_FIGVLYKDKKL_					0	0	0		nc|ENSG00000182541|P53671-2|LIMK2;ENSG00000182541|ENST00000331728|LIMK2;nc|ENSG00000182541|P53671-3|LIMK2	nc|ENSG00000182541|P53671-2|LIMK2	nc|ENSG00000182541|P53671-2|LIMK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2740478515625	3	441.939346	1322.79621	0.34059	0.00015052	0.6447	0.00028492	0.98528	0.00043544	441.939508619888	56.282	0.57769	56.381	55.87	56.448	0.099186					56	26	3	0	0	0	0.78683	1	4717	4717		14.086	1.1285	1	966620			8830	7460	6174	6180	10161	10161					0.14772255084858443
FIHHWRDRRHQ	11	Unmodified	_FIHHWRDRRHQ_					0	0	0		ENSG00000249931|ENST00000512626|GOLGA8K;ENSG00000261247|ENST00000569052|GOLGA8T	ENSG00000249931|ENST00000512626|GOLGA8K	ENSG00000249931|ENST00000512626|GOLGA8K	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.9418334960938	3	529.943258	1586.80794	0.12573	6.6629E-05	-3.3233	-0.0017612	-3.1976	-0.0016945	529.9411442982968	71.898	0.075424	71.938	71.885	71.961	0.040222					4	2	2	0	0	0	0.80593	1	6902	6902		10.104	0.45776	1	30053			8831	8841	6175	6181	10162	10162					0.03801309671439412
FIHLLYRLQ	9	Unmodified	_FIHLLYRLQ_					0	0	0			REV__ENSG00000107036|ENST00000414202|RIC1	REV__ENSG00000107036|ENST00000414202|RIC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.85791015625	2	601.855858	1201.69716	-0.51505	-0.00030999	3.5078	0.0021112	2.9927	0.0018012	601.8578575542072	103.62	2.2032	103.62	103.26	105.47	-0.0035706					116	52	4	0	0	0	0.76996	1	11130	11130		33.516	4.3455	1	1418100	+		8832	17642	6176	6182	10163	10163					0.10438276910645072
FIHLLYRLQ	9	Unmodified	_FIHLLYRLQ_					0	0	0			REV__ENSG00000107036|ENST00000414202|RIC1	REV__ENSG00000107036|ENST00000414202|RIC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.8580322265625	2	601.855858	1201.69716	3.2383	0.001949	-0.30809	-0.00018543	2.9302	0.0017635	601.8555799865445	103.53	2.0205	103.49	103.12	105.14	-0.043755					118	48	4	0	0	0	0.76996	2	11345	11345;11369		33.516	6.4683	1	1395200	+		8833	17642	6176	6182	10164;10165	10164					0.10438276910645072
FIHLLYRLQ	9	Unmodified	_FIHLLYRLQ_					0	0	0			REV__ENSG00000107036|ENST00000414202|RIC1	REV__ENSG00000107036|ENST00000414202|RIC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	601.8594970703125	2	601.855858	1201.69716	-1.2832	-0.00077232	4.4575	0.0026828	3.1743	0.0019105	601.8583669122717	103.38	2.0705	103.5	103.11	105.18	0.11494					139	51	4	0	0	0	0.67235	1	10903	10903		42.474	7.2737	1	2503700	+		8834	17642	6176	6182	10166	10166					0.10438276910645072
FIHMPALQKRL	11	Unmodified	_FIHMPALQKRL_					0	0	0		nc|nan|Q8IXR9-2|C12orf56;ENSG00000185306|ENST00000543942|C12orf56	nc|nan|Q8IXR9-2|C12orf56	nc|nan|Q8IXR9-2|C12orf56	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9330749511719	3	451.932309	1352.7751	-1.018	-0.00046007	1.8725	0.00084626	0.85453	0.00038619	451.9330395027802	99.241	2.1396	99.241	98.063	100.2	0					134	52	3	0	0	0	0.75906	1	10004	10004		20.03	0.7678	1	190490			8835	7700	6177	6183	10167	10167					0.11281966504361662
FIHQENPQQL	10	Unmodified	_FIHQENPQQL_					0	0	0		ENST00000447282.5_1_12:53874154-53874502:+|nuORF	ENST00000447282.5_1_12:53874154-53874502:+|nuORF	ENST00000447282.5_1_12:53874154-53874502:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.317626953125	2	627.317294	1252.62004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.042	1	62.033	61.533	62.533	-0.0094147								0	0	0	0.26894	1	5751	5751		71.877	18.941	1				8836	11847	6178	6184	10168	10168					0.0038301390366086707
FIHRVENRYRQ	11	Unmodified	_FIHRVENRYRQ_					0	0	0			REV__ENST00000556639.5_1_14:90302986-90416480:-|nuORF;REV__nc|ENSG00000140025|Q9BUY7-6|EFCAB11	REV__ENST00000556639.5_1_14:90302986-90416480:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3161926269531	3	506.607652	1516.80113	-0.47717	-0.00024174	2.2879	0.0011591	1.8108	0.00091734	506.608735697041	59.277	0.4704	59.371	59.169	59.639	0.094059					16	13	2	0	0	0	0.17729	1	5060	5060		23.378	9.87	1	57285	+		8837	28704;19593	6179	6185	10169	10169					0.06339952000212179
FIHVFGVLFV	10	Unmodified	_FIHVFGVLFV_					0	0	0			REV__ENST00000393295.7_1_3:128848618-128848771:-|nuORF	REV__ENST00000393295.7_1_3:128848618-128848771:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3434448242188	2	589.342052	1176.66955	-0.6745	-0.00039751	2.0534	0.0012102	1.3789	0.00081267	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.86786	1	10157	10157		26.796	0.10319	1	16185000	+		8838	26052	6180	6186	10170	10170					0.08828373650385402
FIILPIRGVSP	11	Unmodified	_FIILPIRGVSP_					0	0	0			REV__ENSG00000102313|ENST00000218436|ITIH6	REV__ENSG00000102313|ENST00000218436|ITIH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5887145996094	3	404.588536	1210.74378	0.88744	0.00035905	0.76753	0.00031053	1.655	0.00066958	404.58872084181826	39.368	1.6571	39.379	38.582	40.239	0.011173					116	38	4	0	0	0	0.78391	1	2773	2773		14.694	1.1857	1	391440	+		8839	17335	6181	6187	10171	10171					0.14683716741933495
FIILPIRGVSP	11	Unmodified	_FIILPIRGVSP_					0	0	0			REV__ENSG00000102313|ENST00000218436|ITIH6	REV__ENSG00000102313|ENST00000218436|ITIH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.5851135253906	3	404.588536	1210.74378	-1.5542	-0.00062879	1.4009	0.00056678	-0.15327	-6.201E-05	404.58898093984646	40.193	1.0068	40.782	40.174	41.181	0.58915					65	25	4	0	0	0	0.75121	1	3434	3434		21.78	5.2506	1	1622000	+		8840	17335	6181	6187	10172	10172					0.14683716741933495
FIISPAKEKAL	11	Unmodified	_FIISPAKEKAL_					0	0	0			REV__ENSG00000165916|ENST00000298852|PSMC3	REV__ENSG00000165916|ENST00000298852|PSMC3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25048828125	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.42	1	119.33	118.83	119.83	-0.088509								0	0	0	0.56276	1	12896	12896		17.833	2.5	1		+		8841	21233	6182	6188	10173	10173					0.12347706642412959
FIITKQSSLL	10	Unmodified	_FIITKQSSLL_					0	0	0			REV__ENSG00000171133|ENST00000302681|OR2K2	REV__ENSG00000171133|ENST00000302681|OR2K2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.3450927734375	2	575.347532	1148.68051	0.85707	0.00049311	-4.0816	-0.0023483	-3.2245	-0.0018552	575.345131550994	98.458	2.855	98.614	97.622	100.48	0.15659					162	65	5	0	0	0	0.82886	1	10187	10187		37.812	8.6415	1	2526400	+		8842	21715	6183	6189	10174	10174					0.11211731234061517
FIKEELLVHLL	11	Unmodified	_FIKEELLVHLL_					0	0	0		ENSG00000197563|ENST00000640252|PIGN	ENSG00000197563|ENST00000640252|PIGN	ENSG00000197563|ENST00000640252|PIGN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.94287109375	3	451.942868	1352.80677	-1.6861	-0.00076203	2.5014	0.0011305	0.81529	0.00036846	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.76251	1	4511	4511		19.263	5.0194	1	792670			8843	8175	6184	6190	10175	10175					0.14448237739316028
FIKHFFIRFV	10	Unmodified	_FIKHFFIRFV_					0	0	0			REV__ENSG00000168229|ENST00000306051|PTGDR	REV__ENSG00000168229|ENST00000306051|PTGDR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9319152832031	3	451.932526	1352.77575	-1.2127	-0.00054806	1.5008	0.00067824	0.28806	0.00013018	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.85633	1	10166	10166		21.686	0.65352	1	518100	+		8844	21470	6185	6191	10176	10176					0.11347129215710083
FIKKKKKKKEK	11	Unmodified	_FIKKKKKKKEK_					0	0	0		ENST00000367142.4_1_1:205687259-205687394:-|nuORF	ENST00000367142.4_1_1:205687259-205687394:-|nuORF	ENST00000367142.4_1_1:205687259-205687394:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.3285827636719	3	478.329056	1431.96534	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.236	1	75.324	74.824	75.824	0.087631								0	0	0	0.56276	1	6960	6960		1.4188	0.18682	1				8845	10534	6186	6192	10177	10177					0.2666357643824995
FIKLYKKKTGK	11	Unmodified	_FIKLYKKKTGK_					0	0	0		ENST00000442006.2_1_1:39174637-39175513:+|nuORF;ENSG00000044574|ENST00000324460|HSPA5	ENST00000442006.2_1_1:39174637-39175513:+|nuORF	ENST00000442006.2_1_1:39174637-39175513:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.2887878417969	3	451.958741	1352.85439	-1.8424	-0.00083267	-0.62325	-0.00028168	-2.4656	-0.0011144	452.29295702865613	42.895	0.73165	43.593	43.215	43.947	0.69754					44	17	4	0	0	0	0.17302	1	3865	3865		11.455	0	1	647980			8846	950	6187	6193	10178	10178					0.19207936730140318
FIKSVLTVNP	10	Unmodified	_FIKSVLTVNP_					0	0	0		nc|ENSG00000107036|Q4ADV7-3|RIC1;ENSG00000107036|ENST00000414202|RIC1;nc|ENSG00000107036|Q4ADV7-2|RIC1;ENST00000276898.3_1_9:5713908-5748617:+|nuORF	nc|ENSG00000107036|Q4ADV7-3|RIC1	nc|ENSG00000107036|Q4ADV7-3|RIC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	559.3349609375	2	559.334424	1116.6543	-0.79115	-0.00044252	3.8312	0.0021429	3.04	0.0017004	559.3365046411202	31.331	0.55992	31.349	31.121	31.681	0.018362					22	12	2	0	0	0	0.85086	1	1708	1708		19.263	0.93827	1	85898			8847	2328	6188	6194	10179	10179					0.10063462062544204
FILFIMICK	9	Unmodified	_FILFIMICK_					0	0	0		ENST00000415609.6_1_3:69104055-69104112:-|nuORF	ENST00000415609.6_1_3:69104055-69104112:-|nuORF	ENST00000415609.6_1_3:69104055-69104112:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.312255859375	2	564.321417	1126.62828	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.258	1	55.221	54.721	55.721	-0.036827								0	0	0	0.2969	1	4621	4621		31.955	0	1				8848	11381	6189	6195	10180	10180					0.07003153295067932
FILIFSAVSGY	11	Unmodified	_FILIFSAVSGY_					0	0	0		MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|80|3|anti-sense	MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|80|3|anti-sense	MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|80|3|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	608.8381958007812	2	608.834257	1215.65396	0.90898	0.00055342	4.1015	0.0024971	5.0104	0.0030505	608.8366424121912	110.3	0.86794	110.38	110.18	111.05	0.073685					55	25	4	0	0	0	0.71452	1	11841	11841		29.15	6.1071	1	2642000			8849	14726	6190	6196	10181	10181					0.0547604234272967
FILKQEYYL	9	Unmodified	_FILKQEYYL_					0	0	0		ENSG00000164220|ENST00000296641|F2RL2;nc|ENSG00000164220|O00254-2|F2RL2	ENSG00000164220|ENST00000296641|F2RL2	ENSG00000164220|ENST00000296641|F2RL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	608.8367309570312	2	608.834257	1215.65396	0.90898	0.00055342	4.1015	0.0024971	5.0104	0.0030505	608.8366424121912	110.3	0.86794	110.38	110.18	111.05	0.073685					55	25	4	0	0	0	0.77546	1	11861	11861		31.955	2.8053	1	2642000			8850	5940	6191	6197	10182	10182					0.0547604234272967
FILLKPKPSQ	10	Unmodified	_FILLKPKPSQ_					0	0	0		ENSG00000125170|ENST00000340099|DOK4	ENSG00000125170|ENST00000340099|DOK4	ENSG00000125170|ENST00000340099|DOK4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.8663940429688	2	585.865892	1169.71723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.834	1	24.32	23.82	24.82	-0.51365								0	0	0	0.45132	1	1238	1238		25.574	3.8883	1				8851	3375	6192	6198	10183	10183					0.1391602785060968
FILNNLKAP	9	Unmodified	_FILNNLKAP_					0	0	0		ENST00000584670.1_1_18:5423517-5539633:-|nuORF	ENST00000584670.1_1_18:5423517-5539633:-|nuORF	ENST00000584670.1_1_18:5423517-5539633:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.294921875	2	515.30821	1028.60187	-0.42653	-0.00021979	3.0416	0.0015674	2.6151	0.0013476	515.3096403826048	62.952	1.0826	63.34	62.708	63.791	0.3878					43	24	2	0	0	0	0.20789	1	6726	6726		50.025	9.2464	1	114060			8852	14140	6193	6199	10184	10184					0.08870923719587154
FILRLGQNR	9	Unmodified	_FILRLGQNR_					0	0	0			REV__nc|ENSG00000079739|P36871-3|PGM1	REV__nc|ENSG00000079739|P36871-3|PGM1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	558.8397827148438	2	558.835457	1115.65636	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.96	1	115.06	114.56	115.56	0.098114								0	0	0	0.33676	1	12280	12280		18.324	2.6826	1		+		8853	16791	6194	6200	10185	10185					0.10315935591029302
FILVGFSNW	9	Unmodified	_FILVGFSNW_					0	0	0		ENSG00000204701|ENST00000641151|OR2J3;nc|ENSG00000204701|O76001|OR2J3	ENSG00000204701|ENST00000641151|OR2J3	ENSG00000204701|ENST00000641151|OR2J3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.7849731445312	2	541.78711	1081.55967	-0.22268	-0.00012064	-3.1487	-0.0017059	-3.3714	-0.0018266	541.7852590351226	56.903	1.7601	56.891	56.59	58.35	-0.012203					157	62	4	0	0	0	0.74721	1	5211	5211		37.159	3.6435	1	5602900			8854	8481	6195	6201	10186	10186					0.022149483112571033
FILVGFSNW	9	Unmodified	_FILVGFSNW_					0	0	0		ENSG00000204701|ENST00000641151|OR2J3;nc|ENSG00000204701|O76001|OR2J3	ENSG00000204701|ENST00000641151|OR2J3	ENSG00000204701|ENST00000641151|OR2J3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7837524414062	2	541.78711	1081.55967	0.62478	0.0003385	-4.0365	-0.0021869	-3.4117	-0.0018484	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.74721	1	5393	5393		37.159	6.6555	1	5802700			8855	8481	6195	6201	10187	10187					0.022149483112571033
FILYRNRVP	9	Unmodified	_FILYRNRVP_					0	0	0		nc|ENSG00000159363|Q9NQ11-3|ATP13A2;ENSG00000159363|ENST00000326735|ATP13A2;nc|ENSG00000159363|Q9NQ11-2|ATP13A2	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3416137695312	2	589.345658	1176.67676	-0.65315	-0.00038493	-4.2965	-0.0025321	-4.9497	-0.0029171	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.78058	1	9470	9470		30.504	0.18592	1	5584100			8856	5527	6196	6202	10188	10188					0.09549106250847217
FIMDRAQAL	9	Unmodified	_FIMDRAQAL_					0	0	0		ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;ENSG00000105576|ENST00000425528|TNPO2	ENST00000588484.1_1_19:12826020-12830096:-|nuORF	ENST00000588484.1_1_19:12826020-12830096:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.2815551757812	2	532.781502	1063.54845	0.45532	0.00024259	-0.68585	-0.00036541	-0.23054	-0.00012283	533.2822379024827	55.641	0.95193	56.042	55.446	56.398	0.40102					43	22	3	0	0	0	0.36616	2	5723	5723;5737		60.118	1.3363	1	606470			8857	2227	6197	6203	10189;10190	10189					0.01921802945435047
FIMDRAQAL	9	Unmodified	_FIMDRAQAL_					0	0	0		ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;ENSG00000105576|ENST00000425528|TNPO2	ENST00000588484.1_1_19:12826020-12830096:-|nuORF	ENST00000588484.1_1_19:12826020-12830096:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.2833251953125	2	532.781502	1063.54845	0.15725	8.3777E-05	-0.40335	-0.0002149	-0.24611	-0.00013112	533.2824776692572	55.533	0.91537	56.101	55.489	56.404	0.56836					55	21	4	0	0	0	0.33718	1	5722	5722		62.107	1.1355	1	923910			8858	2227	6197	6203	10191	10191					0.01921802945435047
FINKKPGCKS	10	Unmodified	_FINKKPGCKS_					0	0	0			REV__ENST00000341976.4_2_22:24087272-24092949:-|nuORF	REV__ENST00000341976.4_2_22:24087272-24092949:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.8123168945312	2	561.310426	1120.6063	-0.34103	-0.00019142	1.0501	0.00058943	0.70907	0.00039801	561.8121876312182	60.416	1.3094	60.806	60.013	61.322	0.38945					62	35	3	0	0	0	0.54701	2	6404	6404;6438		52.937	12.364	1	1336500	+		8859	25266	6198	6204	10192;10193	10192					0.050820648708622684
FINKKPGCKS	10	Unmodified	_FINKKPGCKS_					0	0	0			REV__ENST00000341976.4_2_22:24087272-24092949:-|nuORF	REV__ENST00000341976.4_2_22:24087272-24092949:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.8126831054688	2	561.310426	1120.6063	-0.23545	-0.00013216	0.54601	0.00030648	0.31056	0.00017432	561.8120839007844	60.294	1.2197	60.848	60.581	61.801	0.55323					59	36	3	0	0	0	0.70553	1	6409	6409		44.377	5.571	1	950930	+		8860	25266	6198	6204	10194	10194					0.050820648708622684
FINKKPGCKS	10	Unmodified	_FINKKPGCKS_					0	0	0			REV__ENST00000341976.4_2_22:24087272-24092949:-|nuORF	REV__ENST00000341976.4_2_22:24087272-24092949:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	561.310426	1120.6063	-0.34365	-0.0001929	-2.1676	-0.0012167	-2.5113	-0.0014096	561.3110754695343	60.008	0.72992	60.561	59.958	60.688	0.55323	-0.12228	-0.0030875	NaN	52.937	34	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	404630	+		8861	25266	6198	6204							0.050820648708622684
FINKLDRMGSN	11	Unmodified	_FINKLDRMGSN_					0	0	0		ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1	ENSG00000168827|ENST00000486715|GFM1	ENSG00000168827|ENST00000486715|GFM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.222412109375	3	432.223928	1293.64996	-1.2201	-0.00052735	-2.6085	-0.0011275	-3.8286	-0.0016548	432.2227949823204	39.449	1.1723	39.817	39.299	40.472	0.36797					49	27	2	0	0	0	0.41445	1	3289	3289		51.727	0	1	3594900			8862	6443	6199	6205	10195	10195					0.014876295773319725
FINPKPITY	9	Unmodified	_FINPKPITY_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.280517578125	2	546.808042	1091.60153	-0.34436	-0.0001883	-0.31926	-0.00017457	-0.66363	-0.00036288	546.808041313352	53.825	0.62689	54.239	53.868	54.495	0.4139					23	14	2	0	0	0	0.20789	1	5442	5442		71.877	24.22	1	219890			8863	4659	6200	6206	10196	10196					0.0593950399975256
FIPKSGSA	8	Unmodified	_FIPKSGSA_					0	0	0		ENSG00000138439|ENST00000392238|FAM117B	ENSG00000138439|ENST00000392238|FAM117B	ENSG00000138439|ENST00000392238|FAM117B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9295654296875	2	403.723978	805.433404	-1.8888	-0.00076254	3.3094	0.0013361	1.4207	0.00057355	403.72525736178375	47.5	1.2747	47.519	47.023	48.298	0.018967					52	38	2	0	0	0	0.4196	1	3512	3512		40.573	10.069	1	357020			8864	4295	6201	6207	10197	10197					0.022904418059511045
FIQMSVQRI	9	Unmodified	_FIQMSVQRI_					0	0	0		ENSG00000047315|ENST00000314595|POLR2B	ENSG00000047315|ENST00000314595|POLR2B	ENSG00000047315|ENST00000314595|POLR2B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.3060302734375	2	561.310426	1120.6063	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.902	1	77.952	77.452	78.452	0.04969								0	0	0	0.28386	1	7641	7641		37.159	0	1				8865	957	6202	6208	10198	10198					0.05082064870885006
FIQVTLPHGP	10	Unmodified	_FIQVTLPHGP_					0	0	0		ENSG00000115904|ENST00000402219|SOS1	ENSG00000115904|ENST00000402219|SOS1	ENSG00000115904|ENST00000402219|SOS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.766845703125	2	554.811116	1107.60768	-0.28504	-0.00015815	1.8854	0.0010461	1.6004	0.00088792	554.8122285403491	34.787	0.10316	34.793	34.727	34.83	0.0063934					4	2	2	0	0	0	0.37624	1	2137	2137		27.882	4.8398	1	11441			8866	2882	6203	6209	10199	10199					0.05818022231255782
FIRIAESDY	9	Unmodified	_FIRIAESDY_					0	0	0			REV__ENST00000504768.2_1_5:93246475-93410459:-|nuORF	REV__ENST00000504768.2_1_5:93246475-93410459:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.2767333984375	2	557.282389	1112.55022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.942	1	59.029	58.529	59.529	0.087002								0	0	0	0.29134	1	5027	5027		34.173	6.0911	1		+		8867	27864	6204	6210	10200	10200					-0.001548647649542545
FIRKRYLARHR	11	Unmodified	_FIRKRYLARHR_					0	0	0		ENSG00000203326|ENST00000474037|ZNF525	ENSG00000203326|ENST00000474037|ZNF525	ENSG00000203326|ENST00000474037|ZNF525	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	505.9739685058594	3	505.975899	1514.90587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.88	1	107.88	107.38	108.38	0								0	0	0	0.56276	1	11236	11236		9.2118	2.1931	1				8868	8385	6205	6211	10201	10201					0.16901118267423954
FIRLTYETA	9	Unmodified	_FIRLTYETA_					0	0	0			REV__nc|ENSG00000041982|P24821-3|TNC	REV__nc|ENSG00000041982|P24821-3|TNC	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.8306884765625	2	557.300581	1112.58661	0.85851	0.00047845	-4.4861	-0.0025001	-3.6276	-0.0020217	557.2979027745034	100.86	0.80933	101.01	100.64	101.45	0.14352					48	19	3	0	0	0	0.20789	1	10617	10617		19.997	0	1	149480	+		8869	16324	6206	6212	10202	10202					0.03482012131757983
FISAGEKRYIV	11	Unmodified	_FISAGEKRYIV_					0	0	0		nc|ENSG00000146039|Q9Y2C5-2|SLC17A4;ENSG00000146039|ENST00000377905|SLC17A4	nc|ENSG00000146039|Q9Y2C5-2|SLC17A4	nc|ENSG00000146039|Q9Y2C5-2|SLC17A4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.861328125	2	641.861338	1281.70812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.31	1	119.24	118.74	119.74	-0.07531								0	0	0	0.56276	1	12794	12794		9.7057	0	1				8870	4815	6207	6213	10203	10203					0.07853634494290418
FISEATVEKLQ	11	Unmodified	_FISEATVEKLQ_					0	0	0		ENSG00000131043|ENST00000320849|AAR2	ENSG00000131043|ENST00000320849|AAR2	ENSG00000131043|ENST00000320849|AAR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.23089599609375	3	422.230966	1263.67107	1.1419	0.00048216	-0.91254	-0.0003853	0.22938	9.6853E-05	422.2305028676614	33.421	0.66919	33.632	33.355	34.024	0.21168					43	15	4	0	0	0	0.41466	1	2441	2441		58.63	1.4809	1	1004500			8871	3710	6208	6214	10204	10204					0.04977918157851491
FISSWRYL	8	Unmodified	_FISSWRYL_					0	0	0		ENST00000289153.6_1_3:138474745-138478109:-|nuORF	ENST00000289153.6_1_3:138474745-138478109:-|nuORF	ENST00000289153.6_1_3:138474745-138478109:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2528686523438	2	536.284734	1070.55492	-0.3697	-0.00019827	-3.9515	-0.0021191	-4.3212	-0.0023174	536.28255490644	84.039	0.56783	84.495	84.232	84.8	0.45555					18	13	2	0	0	0	0.4196	1	9770	9770		60.972	11.53	1	107280			8872	9667	6209	6215	10205	10205					0.02246064168457451
FISSWRYL	8	Unmodified	_FISSWRYL_					0	0	0		ENST00000289153.6_1_3:138474745-138478109:-|nuORF	ENST00000289153.6_1_3:138474745-138478109:-|nuORF	ENST00000289153.6_1_3:138474745-138478109:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	536.284734	1070.55492	-0.51472	-0.00027604	-4.7182	-0.0025303	-5.2329	-0.0028063	536.2822719045045	83.997	0.40942	84.432	84.256	84.666	0.43538	-0.031187	-0.00036452	NaN	60.972	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161020			8873	9667	6209	6215							0.02246064168457451
FITGPDVVK	9	Unmodified	_FITGPDVVK_					0	0	0		ENST00000475214.5_1_3:135974226-136045892:+|nuORF;ENSG00000114054|ENST00000251654|PCCB;nc|ENSG00000114054|P05166-2|PCCB	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	488.278564453125	2	488.279118	974.543683	-0.28542	-0.00013937	-2.2937	-0.00112	-2.5791	-0.0012593	488.2778654781778	17.18	0.3446	17.101	16.982	17.327	-0.079054					22	14	2	0	0	0	0.78536	1	194	194		29.15	3.6994	1	36771			8874	2759	6210	6216	10206	10206					0.05539242074326012
FITGPDVVK	9	Unmodified	_FITGPDVVK_					0	0	0		ENST00000475214.5_1_3:135974226-136045892:+|nuORF;ENSG00000114054|ENST00000251654|PCCB;nc|ENSG00000114054|P05166-2|PCCB	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	488.279118	974.543683	1.0139	0.00049507	-4.2004	-0.002051	-3.1865	-0.0015559	488.27701874417284	16.995	0.29756	17.072	16.951	17.249	0.07715	-0.0032464	-0.0014442	NaN	29.15	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34789			8875	2759	6210	6216							0.05539242074326012
FITGPDVVK	9	Unmodified	_FITGPDVVK_					0	0	0		ENST00000475214.5_1_3:135974226-136045892:+|nuORF;ENSG00000114054|ENST00000251654|PCCB;nc|ENSG00000114054|P05166-2|PCCB	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	488.279118	974.543683	0.069902	3.4132E-05	-3.3987	-0.0016595	-3.3288	-0.0016254	488.27731602056457	17.01	0.13016	17.073	16.962	17.092	0.062601	-0.0022019	-0.00066121	NaN	29.15	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31225			8876	2759	6210	6216							0.05539242074326012
FITGPDVVK	9	Unmodified	_FITGPDVVK_					0	0	0		ENST00000475214.5_1_3:135974226-136045892:+|nuORF;ENSG00000114054|ENST00000251654|PCCB;nc|ENSG00000114054|P05166-2|PCCB	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	488.279118	974.543683	0.35086	0.00017132	-3.0785	-0.0015031	-2.7276	-0.0013318	488.2773614869061	17.557	0.381	17.075	16.898	17.279	-0.48256	-0.00023965	-0.00034852	NaN	29.15	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93992			8877	2759	6210	6216							0.05539242074326012
FITPSFPVDTS	11	Unmodified	_FITPSFPVDTS_					0	0	0		nc|ENSG00000155511|P42261-4|GRIA1;nc|ENSG00000155511|P42261-2|GRIA1;ENSG00000155511|ENST00000285900|GRIA1;nc|ENSG00000155511|P42261-6|GRIA1;nc|ENSG00000155511|P42261-5|GRIA1;ENST00000481559.6_1_5:152869375-153085697:+|nuORF	nc|ENSG00000155511|P42261-4|GRIA1	nc|ENSG00000155511|P42261-4|GRIA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.8040771484375	2	605.803154	1209.59175	0.26797	0.00016234	1.3493	0.00081744	1.6173	0.00097977	605.8037042070808	56.302	1.0201	56.699	56.394	57.414	0.39672					62	25	4	0	0	0	0.60058	1	5822	5822		44.377	3.599	1	2984400			8878	5326	6211	6217	10207	10207					-0.004657287962800183
FIVDFWRH	8	Unmodified	_FIVDFWRH_					0	0	0			REV__nc|ENSG00000188092|B7ZAQ6-2|GPR89A	REV__nc|ENSG00000188092|B7ZAQ6-2|GPR89A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8252563476562	2	560.290351	1118.56615	1.1035	0.00061826	3.5494	0.0019887	4.6528	0.0026069	560.7944363633632	50.614	0.36952	51.366	51.08	51.449	0.75174					14	8	2	0	0	0	0.4196	1	5012	5012		53.351	34.248	1	163510	+		8879	18251	6212	6218	10208	10208					0.011608862625962502
FIVDVVSDLVL	11	Unmodified	_FIVDVVSDLVL_					0	0	0			REV__ENST00000394964.3_1_14:63416779-63568536:-|nuORF	REV__ENST00000394964.3_1_14:63416779-63568536:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	609.8588256835938	2	609.852647	1217.69074	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.858	1	23.91	23.41	24.41	0.05291								0	0	0	0.56276	1	787	787		31.53	0	1		+		8880	19591	6213	6219	10209	10209					0.09060294168602923
FIVEETLPL	9	Unmodified	_FIVEETLPL_					0	0	0		nc|ENSG00000197714|Q14592-2|ZNF460;ENSG00000197714|ENST00000360338|ZNF460	nc|ENSG00000197714|Q14592-2|ZNF460	nc|ENSG00000197714|Q14592-2|ZNF460	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.7989501953125	2	530.799883	1059.58521	1.4661	0.00077821	1.0158	0.00053917	2.4819	0.0013174	530.8004854183959	89.778	0.62534	90.229	89.944	90.57	0.45058					31	17	2	0	0	0	0.22631	2	10609	10600;10609		71.296	13.484	1	1082800			8881	8192	6214	6220	10210;10211	10211					0.0578037804300493
FIVEETLPL	9	Unmodified	_FIVEETLPL_					0	0	0		nc|ENSG00000197714|Q14592-2|ZNF460;ENSG00000197714|ENST00000360338|ZNF460	nc|ENSG00000197714|Q14592-2|ZNF460	nc|ENSG00000197714|Q14592-2|ZNF460	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7991943359375	2	530.799883	1059.58521	-1.4931	-0.00079255	4.3617	0.0023152	2.8686	0.0015226	530.8024048207582	89.891	0.75801	90.361	89.972	90.73	0.47068					39	19	3	0	0	0	0.19953	3	10670	10656;10660;10670		73.975	13.856	1	1102000			8882	8192	6214	6220	10212;10213;10214	10214					0.0578037804300493
FIVFKIFLH	9	Unmodified	_FIVFKIFLH_					0	0	0		ENSG00000165182|ENST00000379211|CXorf58	ENSG00000165182|ENST00000379211|CXorf58	ENSG00000165182|ENST00000379211|CXorf58	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353271484375	2	582.35242	1162.69029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.73	1	115.71	115.21	116.21	-0.02433								0	0	0	0.30672	1	12812	12812		28.254	6.5685	1				8883	6056	6215	6221	10215	10215					0.11544964030076699
FIVFLIKLLRG	11	Unmodified	_FIVFLIKLLRG_					0	0	0			REV__ENSG00000227877|ENST00000414264|MRLN	REV__ENSG00000227877|ENST00000414264|MRLN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2929992675781	3	440.291831	1317.85366	-1.4987	-0.00065986	2.7845	0.001226	1.2858	0.00056611	440.29287290347224	59.592	1.1212	59.686	59.191	60.312	0.094063					94	32	4	0	0	0	0.76892	1	5142	5142		17.833	3.7471	1	285330	+		8884	23748	6216	6222	10216	10216					0.20745142081091217
FIVFLIKLLRG	11	Unmodified	_FIVFLIKLLRG_					0	0	0			REV__ENSG00000227877|ENST00000414264|MRLN	REV__ENSG00000227877|ENST00000414264|MRLN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2929382324219	3	440.291831	1317.85366	-0.80694	-0.00035529	1.916	0.00084358	1.109	0.00048829	440.2925892319023	59.813	1.0781	59.814	59.336	60.414	0.00051117					87	33	3	0	0	0	0.7896	1	5146	5146		13.508	1.5756	1	264470	+		8885	23748	6216	6222	10217	10217					0.20745142081091217
FIVIRQVKGVP	11	Unmodified	_FIVIRQVKGVP_					0	0	0			REV__ENST00000488099.1_1_2:38809156-38812824:-|nuORF	REV__ENST00000488099.1_1_2:38809156-38812824:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.2709045410156	3	419.267686	1254.78123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.977	1	50.007	49.507	50.507	0.029629								0	0	0	0.56276	1	3899	3899		25.126	5.0955	1		+		8886	19852	6217	6223	10218	10218					0.16402808007524072
FIVQSRILY	9	Unmodified	_FIVQSRILY_					0	0	0		ENSG00000088538|ENST00000266037|DOCK3	ENSG00000088538|ENST00000266037|DOCK3	ENSG00000088538|ENST00000266037|DOCK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.8348999023438	2	569.834591	1137.65463	1.1831	0.00067415	-1.2966	-0.00073884	-0.11352	-6.4686E-05	569.8337831453182	57.466	1.5319	58.021	57.642	59.174	0.55513					116	37	5	0	0	0	0.19953	1	6018	6018		73.975	5.1286	1	15184000			8887	1591	6218	6224	10219	10219					0.09130881782425604
FIVVRKNPF	9	Unmodified	_FIVVRKNPF_					0	0	0		ENSG00000106688|ENST00000262352|SLC1A1	ENSG00000106688|ENST00000262352|SLC1A1	ENSG00000106688|ENST00000262352|SLC1A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3402709960938	2	560.337301	1118.66005	1.387	0.00077719	3.6811	0.0020627	5.0681	0.0028398	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.7932	1	11444	11444		20.482	3.0138	1	81463000			8888	2314	6219	6225	10220	10220					0.10546605364879724
FIYLGWHPL	9	Unmodified	_FIYLGWHPL_					0	0	0			REV__ENSG00000163933|ENST00000296292|RFT1	REV__ENSG00000163933|ENST00000296292|RFT1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.021240234375	2	573.310752	1144.60695	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.096	1	77.221	76.721	77.721	0.12485								0	0	0	0.30219	1	7229	7229		29.842	0.69198	1		+		8889	20999	6220	6226	10221	10221					0.040432275822240626
FKALGIAQ	8	Unmodified	_FKALGIAQ_					0	0	0		ENST00000496846.1_1_7:30411448-30411829:+|nuORF	ENST00000496846.1_1_7:30411448-30411829:+|nuORF	ENST00000496846.1_1_7:30411448-30411829:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2561340332031	2	424.255446	846.496338	0.56849	0.00024119	-0.25568	-0.00010848	0.31281	0.00013271	424.2552570382703	33.107	1.3615	33.277	32.418	33.78	0.16971					44	31	3	0	0	0	0.67263	1	2356	2356		68.485	5.1784	1	698090			8890	12796	6221	6227	10222	10222					0.06695007593987157
FKATIFVRVKS	11	Unmodified	_FKATIFVRVKS_					0	0	0			REV__ENST00000367634.6_1_1:178888341-178888569:+|nuORF	REV__ENST00000367634.6_1_1:178888341-178888569:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3949584960938	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.76251	1	12257	12257		19.263	1.7947	1	2297700	+		8891	25574	6222	6228	10223	10223					0.14054504144928615
FKENGYSP	8	Unmodified	_FKENGYSP_					0	0	0		ENST00000584959.1_1_17:62888964-62905837:+|nuORF	ENST00000584959.1_1_17:62888964-62905837:+|nuORF	ENST00000584959.1_1_17:62888964-62905837:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.2187805175781	2	471.2218	940.429047	-0.094114	-4.4348E-05	-4.1349	-0.0019485	-4.2291	-0.0019928	471.2196630157112	35.385	0.84711	35.373	35.035	35.882	-0.012203					37	18	3	0	0	0	0.91977	1	2214	2214		45.952	3.5558	1	295230			8892	14141	6223	6229	10224	10224					-0.043550674076186624
FKFRKYRQHHK	11	Unmodified	_FKFRKYRQHHK_					0	0	0		L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|75|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|75|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|75|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	525.9635009765625	3	525.632021	1573.87423	-1.7853	-0.00093843	-3.8816	-0.0020403	-5.6669	-0.0029787	525.630099752315	19.204	0.44818	19.204	19.016	19.464	0					29	14	3	0	0	0	0.84494	1	398	398		6.3209	2.7018	1	70348			8893	14647	6224	6230	10225	10225					0.1102512551349264
FKGNKIPR	8	Unmodified	_FKGNKIPR_					0	0	0		L1PA5_dup10786|chr19:22675332-22678335:+|1.1708874818612802|0.0391258163957598|4.9|62.0|46|2|sense	L1PA5_dup10786|chr19:22675332-22678335:+|1.1708874818612802|0.0391258163957598|4.9|62.0|46|2|sense	L1PA5_dup10786|chr19:22675332-22678335:+|1.1708874818612802|0.0391258163957598|4.9|62.0|46|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.2930603027344	2	480.292894	958.571235	-0.23876	-0.00011467	-0.77911	-0.0003742	-1.0179	-0.00048887	480.2925060650638	29.892	0.60714	29.849	29.533	30.14	-0.043095					20	13	2	0	0	0	0.86288	1	1602	1602		26.796	1.3459	1	47111			8894	14635	6225	6231	10226	10226					0.09029190125215791
FKGSWATH	8	Unmodified	_FKGSWATH_					0	0	0		ENST00000513199.5_1_4:99943548-99960531:+|nuORF;ENST00000510209.5_1_4:99916904-99957225:+|nuORF;ENSG00000164024|ENST00000296411|METAP1	ENST00000513199.5_1_4:99943548-99960531:+|nuORF	ENST00000513199.5_1_4:99943548-99960531:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.23297119140625	2	467.232502	932.450451	-0.78556	-0.00036704	2.7133	0.0012678	1.9278	0.00090072	467.2336097851308	69.799	1.6914	69.762	69.451	71.142	-0.036964					147	87	2	0	0	0	0.89962	1	6759	6759		38.806	0	1	4050000			8895	5903	6226	6232	10227	10227					-0.018476375882528373
FKHWIIRG	8	Unmodified	_FKHWIIRG_					0	0	0			REV__nc|ENSG00000136522|Q9HD33-3|MRPL47	REV__nc|ENSG00000136522|Q9HD33-3|MRPL47	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.7810668945312	2	528.808711	1055.60287	0.42424	0.00022434	3.9433	0.0020853	4.3676	0.0023096	529.3109693869853	55.686	0.26565	55.785	55.62	55.886	0.099186					14	9	2	0	0	0	0.4196	1	4658	4658		25.45	4.5032	1	119920	+		8896	19316	6227	6233	10228	10228					0.07729182879188556
FKIARTFL	8	Unmodified	_FKIARTFL_					0	0	0			REV__ENSG00000240720|ENST00000458448|LRRD1	REV__ENSG00000240720|ENST00000458448|LRRD1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.305419921875	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.634	1	52.705	52.205	53.205	0.070713								0	0	0	0.29631	1	4255	4255		25.45	0.94616	1		+		8897	23814	6228	6234	10229	10229					0.0988724492780193
FKILAAILHLG	11	Unmodified	_FKILAAILHLG_					0	0	0		nc|ENSG00000128833|Q9NQX4-2|MYO5C;ENSG00000128833|ENST00000261839|MYO5C;ENST00000560809.5_1_15:52548900-52557395:-|nuORF;ENST00000558902.5_1_15:52548900-52571163:-|nuORF	nc|ENSG00000128833|Q9NQX4-2|MYO5C	nc|ENSG00000128833|Q9NQX4-2|MYO5C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.3818359375	2	598.381709	1194.74886	-2.4045	-0.0014388	1.9021	0.0011382	-0.50239	-0.00030062	598.3827122218626	40.848	1.3552	40.855	40.235	41.59	0.0065727					86	35	3	0	0	0	0.77538	1	3025	3025		16.473	1.6083	1	583190			8898	3563	6229	6235	10230	10230					0.15928020604565063
FKINQKEGI	9	Unmodified	_FKINQKEGI_					0	0	0		ENSG00000166147|ENST00000316623|FBN1;ENST00000559133.5_3_15:48703189-48720097:-|nuORF	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.8060302734375	2	538.808574	1075.60259	0.74987	0.00040403	-4.2313	-0.0022799	-3.4814	-0.0018758	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.74721	1	8987	8987		37.159	5.2042	1	840570			8899	6162	6230	6236	10231	10231					0.06781718368665679
FKKALPALPI	10	Unmodified	_FKKALPALPI_					0	0	0		nc|ENSG00000288674|P49810-2|PSEN2;nc|ENSG00000288674|P49810-3|PSEN2;ENSG00000143801|ENST00000366783|PSEN2;nc|ENSG00000080815|P49768-6|PSEN1;nc|ENSG00000080815|P49768-7|PSEN1;nc|ENSG00000080815|P49768-2|PSEN1;ENSG00000080815|ENST00000324501|PSEN1;ENST00000555867.1_1_14:73673029-73685994:+|nuORF	nc|ENSG00000288674|P49810-2|PSEN2	nc|ENSG00000288674|P49810-2|PSEN2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3612060546875	2	549.357702	1096.70085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.631	1	44.64	44.14	45.14	0.0084534								0	0	0	0.45132	1	3160	3160		23.042	2.0956	1				8900	4663	6231	6237	10232	10232					0.15636946684503528
FKKGKHKFS	9	Unmodified	_FKKGKHKFS_					0	0	0			REV__ENST00000433257.5_1_7:44605603-44609428:-|nuORF	REV__ENST00000433257.5_1_7:44605603-44609428:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.830810546875	2	553.827101	1105.63965	3.3341	0.0018465	2.354	0.0013037	5.688	0.0031502	553.8282134205963	102.58	0.81242	102.53	102.22	103.03	-0.047005					43	19	3	0	0	0	0.78983	1	11196	11196		27.882	3.6795	1	563570	+		8901	19301	6232	6238	10233	10233					0.09105434705065818
FKKHIEKRVRS	11	Unmodified	_FKKHIEKRVRS_					0	0	0		nc|ENSG00000163618|Q9ULU8-5|CADPS;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000163618|Q9ULU8-2|CADPS;ENSG00000163618|ENST00000383710|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS	nc|ENSG00000163618|Q9ULU8-5|CADPS;nc|ENSG00000163618|Q9ULU8-2|CADPS	nc|ENSG00000163618|Q9ULU8-5|CADPS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6234130859375	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.77205	1	12886	12886		17.167	4.7339	1	2577100			8902	15050;5837	6233	6239	10234	10234					0.15574901045056322
FKKIFLRSL	9	Unmodified	_FKKIFLRSL_					0	0	0			REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	576.3692626953125	2	576.368601	1150.72265	-0.47163	-0.00027183	1.5205	0.00087636	1.0489	0.00060453	576.3692846293156	49.552	2.2217	49.528	48.488	50.71	-0.024033					105	50	3	0	0	0	0.7932	1	4228	4228		14.865	1.0895	1	193280	+		8903	25957	6234	6240	10235	10235					0.15331751433086538
FKKIFLRSL	9	Unmodified	_FKKIFLRSL_					0	0	0			REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3692626953125	2	576.368601	1150.72265	-0.38703	-0.00022307	1.819	0.0010484	1.432	0.00082536	576.369487649421	37.688	1.7157	38.174	37.83	39.546	0.48581					111	42	4	0	0	0	0.7932	1	3125	3125		26.693	3.6504	1	1850300	+		8904	25957	6234	6240	10236	10236					0.15331751433086538
FKKIFLRSL	9	Unmodified	_FKKIFLRSL_					0	0	0			REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	576.368601	1150.72265	-0.82298	-0.00047434	1.8441	0.0010629	1.0211	0.00058853	576.369510342706	49.228	1.5907	49.223	48.475	50.066	-0.0043449	-0.20701	0.00080214	NaN	14.865	81	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	234530	+		8905	25957	6234	6240							0.15331751433086538
FKKIFLRSL	9	Unmodified	_FKKIFLRSL_					0	0	0			REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	576.368601	1150.72265	-0.47163	-0.00027183	1.5205	0.00087636	1.0489	0.00060453	576.3692846293156	49.552	2.2217	49.528	48.488	50.71	-0.024033	0.098057	0.00042913	NaN	14.865	105	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	193280	+		8906	25957	6234	6240							0.15331751433086538
FKKIFLRSL	9	Unmodified	_FKKIFLRSL_					0	0	0			REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	576.368601	1150.72265	-0.011654	-6.7168E-06	1.0363	0.00059732	1.0247	0.0005906	576.3690257397874	49.416	2.2394	49.419	48.532	50.772	0.0025635	-0.011265	-0.00012896	NaN	14.865	101	52	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	230020	+		8907	25957	6234	6240							0.15331751433086538
FKKIFLRSL	9	Unmodified	_FKKIFLRSL_					0	0	0			REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	576.368601	1150.72265	0.539	0.00031066	0.62255	0.00035882	1.1615	0.00066948	576.3688470330674	49.418	2.2116	49.444	48.239	50.45	0.025574	0.013436	-0.00060596	NaN	14.865	128	58	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338680	+		8908	25957	6234	6240							0.15331751433086538
FKKKHVGG	8	Unmodified	_FKKKHVGG_					0	0	0		nc|ENSG00000164327|Q6R327-3|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.27386474609375	2	450.774337	899.534121	1.3011	0.0005865	3.152	0.0014208	4.4531	0.0020073	450.7757870209558	95.13	1.9917	95.176	94.833	96.825	0.04673					81	46	2	0	0	0	0.4196	1	10123	10123		26.796	0	1	387450			8909	15058	6235	6241	10237	10237					0.08033518579475185
FKKKKKERKV	10	Unmodified	_FKKKKKERKV_					0	0	0		ENST00000398645.6_1_11:67023765-67023882:+|nuORF	ENST00000398645.6_1_11:67023765-67023882:+|nuORF	ENST00000398645.6_1_11:67023765-67023882:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.292236328125	3	440.294235	1317.86087	-0.12551	-5.5261E-05	-4.0795	-0.0017962	-4.205	-0.0018514	440.29228151572136	58.121	1.3606	58.091	57.557	58.917	-0.029865					98	39	4	0	0	0	0.8573	1	5375	5375		16.007	2.4988	1	263280			8910	11187	6236	6242	10238	10238					0.21465874681530295
FKKLHKFKKFI	11	Unmodified	_FKKLHKFKKFI_					0	0	0			REV__ENST00000534376.1_1_6:138892799-138893132:-|nuORF	REV__ENST00000534376.1_1_6:138892799-138893132:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	488.9622802734375	3	488.646497	1462.91766	0.070349	3.4376E-05	-0.69351	-0.00033888	-0.62316	-0.00030451	488.6464792370283	16.717	0.56721	16.776	16.462	17.029	0.059269					44	23	3	0	0	0	0.18216	1	156	156		9.6461	6.2374	1	287540	+		8911	28367	6237	6243	10239	10239					0.2047192223806178
FKKLIQVAPPK	11	Unmodified	_FKKLIQVAPPK_					0	0	0		nc|ENSG00000173124|Q6P461-2|ACSM6;ENSG00000173124|ENST00000394005|ACSM6;nc|ENSG00000173124|Q6P461-3|ACSM6	nc|ENSG00000173124|Q6P461-2|ACSM6	nc|ENSG00000173124|Q6P461-2|ACSM6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.3698120117188	2	634.908091	1267.80163	2.7968	0.0017757	-3.5628	-0.0022621	-0.76599	-0.00048633	634.9060889700595	112.19	0.11671	112.17	112.07	112.19	-0.025414					4	2	2	0	0	0	0.17385	1	12389	12389		25.574	13.367	1	331930			8912	6830	6238	6244	10240	10240					0.17843978667360716
FKKPGLTG	8	Unmodified	_FKKPGLTG_					0	0	0		ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2;nc|ENSG00000024048|Q8IWV8-3|UBR2	ENSG00000024048|ENST00000372901|UBR2	ENSG00000024048|ENST00000372901|UBR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2555847167969	2	424.255446	846.496338	0.56849	0.00024119	-0.25568	-0.00010848	0.31281	0.00013271	424.2552570382703	33.107	1.3615	33.277	32.418	33.78	0.16971					44	31	3	0	0	0	0.88944	1	2368	2368		57.811	0	1	698090			8913	864	6239	6245	10241	10241					0.06695007593987157
FKKQTIYRFLK	11	Unmodified	_FKKQTIYRFLK_					0	0	0		ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.3004150390625	3	491.297645	1470.87111	-0.0791	-3.8862E-05	2.9922	0.0014701	2.9131	0.0014312	491.2990070775852	111.38	0.92337	111.32	111.11	112.03	-0.059937					68	29	3	0	0	0	0.8398	1	12128	12128		6.6596	0.33873	1	198860			8914	4791	6240	6246	10242	10242					0.15450437616118506
FKKRNKWVKKV	11	Unmodified	_FKKRNKWVKKV_					0	0	0			REV__ENST00000467485.5_1_6:26384034-26390495:+|nuORF	REV__ENST00000467485.5_1_6:26384034-26390495:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	488.2392883300781	3	487.645267	1459.91397	0.33157	0.00016169	2.0401	0.00099485	2.3717	0.0011565	487.6461366961095	49.813	1.0428	49.855	49.392	50.435	0.042236					59	25	3	0	0	0	0.17911	1	3918	3918		5.6988	0	1	171830	+		8915	27157	6241	6247	10243	10243					0.2024125246418862
FKKSIVETT	9	Unmodified	_FKKSIVETT_					0	0	0			REV__MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|60|1|anti-sense	REV__MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|60|1|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	527.3055419921875	2	526.802957	1051.59136	0.81509	0.00042939	3.3218	0.0017499	4.1369	0.0021793	526.8069736704849	99.203	1.8022	99.359	98.454	100.26	0.15659					134	41	5	0	0	0	0.78058	1	10401	10401		30.504	3.7075	1	2351200	+		8916	29663	6242	6248	10244	10244					0.06762896274517516
FKKTKIMK	8	Unmodified	_FKKTKIMK_					0	0	0		ENST00000229866.10_1_6:37328318-37358531:+|nuORF	ENST00000229866.10_1_6:37328318-37358531:+|nuORF	ENST00000229866.10_1_6:37328318-37358531:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.2493286132812	2	512.322805	1022.63106	0.9839	0.00050408	2.5049	0.0012833	3.4888	0.0017874	512.324091379389	21.2	0.73422	20.741	20.395	21.129	-0.4591					30	17	2	0	0	0	0.4196	1	786	786		13.454	7.1414	1	143260			8917	9211	6243	6249	10245	10245					0.12064744744236577
FKKTNLSSSH	10	Unmodified	_FKKTNLSSSH_					0	0	0		ENSG00000182791|ENST00000333861|CCDC87	ENSG00000182791|ENST00000333861|CCDC87	ENSG00000182791|ENST00000333861|CCDC87	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.8057250976562	2	574.806562	1147.59857	-0.31971	-0.00018377	0.46719	0.00026855	0.14748	8.4775E-05	574.8065752551452	33.893	0.70363	33.895	33.586	34.289	0.0026054					36	15	3	0	0	0	0.67571	1	2017	2017		45.972	1.8554	1	176100			8918	7473	6244	6250	10246	10246					0.030676288749418745
FKKYLVKLKS	10	Unmodified	_FKKYLVKLKS_					0	0	0		nc|ENSG00000100485|Q07890-2|SOS2;ENSG00000100485|ENST00000216373|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.6046447753906	3	418.604186	1252.79073	-1.7442	-0.00073012	3.1032	0.001299	1.359	0.00056889	418.60537062211796	49.043	4.3192	49.043	47.911	52.23	0					175	108	3	0	0	0	0.86409	1	3921	3921		25.126	1.7481	1	101990			8919	1843	6245	6251	10247	10247					0.1744457629306453
FKLILCFKF	9	Unmodified	_FKLILCFKF_					0	0	0			REV__ENST00000220531.7_1_15:45898790-45898961:+|nuORF	REV__ENST00000220531.7_1_15:45898790-45898961:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.8444213867188	2	579.840831	1157.66711	3.115	0.0018062	2.0628	0.0011961	5.1778	0.0030023	579.8421153406522	102.31	1.4996	102.26	101.49	102.99	-0.047005					86	35	4	0	0	0	0.78058	1	11209	11209		30.504	2.6214	1	1243200	+		8920	24152	6246	6252	10248	10248					0.09458201921120235
FKLMQKRSI	9	Unmodified	_FKLMQKRSI_					0	0	0			REV__ENSG00000183808|ENST00000520560|RBM12B	REV__ENSG00000183808|ENST00000520560|RBM12B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.843017578125	2	575.841894	1149.66923	0.61103	0.00035186	1.1234	0.0006469	1.7344	0.00099876	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.78058	1	9311	9311		30.504	1.3541	1	6623700	+		8921	22629	6247	6253	10249	10249					0.10038630658914371
FKLPRPSFK	9	Unmodified	_FKLPRPSFK_					0	0	0			REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1	REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3401489257812	2	560.337301	1118.66005	1.3347	0.00074785	3.9527	0.0022149	5.2874	0.0029627	560.3393959922291	89.415	3.8062	89.464	86.947	90.753	0.048157					198	89	4	0	0	0	0.78058	1	9201	9201		30.504	6.9809	1	1103500	+		8922	22783	6248	6254	10250	10250					0.10546605364879724
FKLSILGP	8	Unmodified	_FKLSILGP_					0	0	0		ENST00000518451.1_1_7:27179727-27192134:-|nuORF	ENST00000518451.1_1_7:27179727-27192134:-|nuORF	ENST00000518451.1_1_7:27179727-27192134:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7689514160156	2	437.773471	873.53239	-1.5161	-0.00066369	-3.9886	-0.0017461	-5.5047	-0.0024098	437.77165455530013	42.195	1.723	42.892	42.344	44.067	0.69754					85	42	3	0	0	0	0.84341	1	3765	3765		24.203	1.1603	1	1268100			8923	13116	6249	6255	10251	10251					0.0905646477085611
FKMLSRKLA	9	Unmodified	_FKMLSRKLA_					0	0	0		ENST00000477063.5_1_3:122928052-122962678:+|nuORF;ENSG00000121542|ENST00000492595|SEC22A	ENST00000477063.5_1_3:122928052-122962678:+|nuORF	ENST00000477063.5_1_3:122928052-122962678:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3327026367188	2	547.331162	1092.64777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.62	1	116.58	116.08	117.08	-0.037872								0	0	0	0.3465	1	13979	13979		15.642	0	1				8924	3186	6250	6256	10252	10252					0.10515245630222125
FKNLAAPI	8	Unmodified	_FKNLAAPI_					0	0	0		nc|ENSG00000132912|Q9UJW0-2|DCTN4;ENSG00000132912|ENST00000447998|DCTN4;nc|ENSG00000132912|Q9UJW0-3|DCTN4	nc|ENSG00000132912|Q9UJW0-2|DCTN4	nc|ENSG00000132912|Q9UJW0-2|DCTN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26556396484375	2	437.263271	872.511988	1.7622	0.00077054	3.9045	0.0017073	5.6667	0.0024778	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.88915	1	977	977		35.201	5.3592	1	1079000			8925	3840	6251	6257	10253	10253					0.07063294111037521
FKNLENKPVF	10	Unmodified	_FKNLENKPVF_					0	0	0		nc|ENSG00000255374|P59539|TAS2R45	nc|ENSG00000255374|P59539|TAS2R45	nc|ENSG00000255374|P59539|TAS2R45	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	618.3460693359375	2	618.342781	1234.67101	1.2492	0.00077242	3.7041	0.0022904	4.9533	0.0030628	618.344978551102	97.744	3.3917	97.971	96.779	100.17	0.22787					230	79	4	0	0	0	0.80179	1	10091	10091		39.253	2.8061	1	960930			8926	15296	6252	6258	10254	10254					0.06305962948522392
FKNQRWGEWW	10	Unmodified	_FKNQRWGEWW_					0	0	0		ENST00000590040.5_1_2:179388144-179407011:+|nuORF	ENST00000590040.5_1_2:179388144-179407011:+|nuORF	ENST00000590040.5_1_2:179388144-179407011:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.6319580078125	3	479.566794	1435.67855	-0.66649	-0.00031962	-0.79666	-0.00038205	-1.4632	-0.00070168	479.56645741461455	19.829	0.36781	19.199	18.937	19.305	-0.6296					12	7	2	0	0	0	0.37624	1	538	538		24.232	10.724	1	38143			8927	14250	6253	6259	10255	10255					-0.021858847312159924
FKPAESFD	8	Unmodified	_FKPAESFD_					0	0	0			REV__nc|ENSG00000221986|A2RUH7-2|MYBPHL	REV__nc|ENSG00000221986|A2RUH7-2|MYBPHL	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.72430419921875	2	470.724175	939.433798	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.63	1	23.587	23.087	24.087	-0.043221								0	0	0	0.29871	1	795	795		23.042	1.0826	1		+		8928	23722	6254	6260	10256	10256					-0.03834183264859803
FKPKWMKLKDE	11	Oxidation (M)	_FKPKWM(Oxidation (M))KLKDE_		FKPKWM(1)KLKDE		FKPKWM(69)KLKDE	0	0	1			REV__ENSG00000187889|ENST00000343433|FYB2	REV__ENSG00000187889|ENST00000343433|FYB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.26470947265625	3	489.267245	1464.77991	-0.45373	-0.00022199	1.3126	0.00064219	0.85882	0.00042019	489.26775137076925	32.311	0.68915	32.438	32.116	32.805	0.12643					32	15	3	0	0	0	0.32604	1	2252	2252		68.626	13.542	1	492740	+		8929	22959	6255	6261	10257	10257		349			0.0661080585646232
FKQHIPLI	8	Unmodified	_FKQHIPLI_					0	0	0		ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.30645751953125	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.648	1	52.573	52.073	53.073	-0.074509								0	0	0	0.29694	1	4261	4261		37.028	7.8789	1				8930	3051	6256	6262	10258	10258					0.0988724492780193
FKQLLAGP	8	Unmodified	_FKQLLAGP_					0	0	0		nc|ENSG00000054611|Q8WUA7-3|TBC1D22A;nc|ENSG00000054611|Q8WUA7-4|TBC1D22A;ENSG00000054611|ENST00000337137|TBC1D22A	nc|ENSG00000054611|Q8WUA7-3|TBC1D22A	nc|ENSG00000054611|Q8WUA7-3|TBC1D22A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2656555175781	2	437.263271	872.511988	2.8534	0.0012477	2.2102	0.00096646	5.0637	0.0022142	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.81548	1	1267	1267		20.482	1.1219	1	21873000			8931	1021	6257	6263	10259	10259					0.07063294111037521
FKQLTGKTAL	10	Unmodified	_FKQLTGKTAL_					0	0	0			REV__ENSG00000114554|ENST00000393409|PLXNA1;REV__ENSG00000076356|ENST00000367033|PLXNA2;REV__ENSG00000221866|ENST00000321063|PLXNA4;REV__ENSG00000130827|ENST00000369682|PLXNA3	REV__ENSG00000076356|ENST00000367033|PLXNA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.83056640625	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.80179	1	9220	9220		39.253	6.4404	1	5453100	+		8932	16725;18914;18055;23709	6258	6264	10260	10260					0.10094577919790026
FKRFLRKKSKP	11	Unmodified	_FKRFLRKKSKP_					0	0	0		ENSG00000112562|ENST00000356284|SMOC2;nc|ENSG00000112562|Q9H3U7-2|SMOC2	ENSG00000112562|ENST00000356284|SMOC2	ENSG00000112562|ENST00000356284|SMOC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.239013671875	3	478.973384	1433.89832	-0.99416	-0.00047617	3.6133	0.0017307	2.6191	0.0012545	479.3095922977438	52.921	1.246	53.536	53.075	54.321	0.61436					42	29	2	0	0	0	0.18238	1	5413	5413		5.6988	0	1	121120			8933	2669	6259	6265	10261	10261					0.19872965947138255
FKRIVLGLCV	10	Unmodified	_FKRIVLGLCV_					0	0	0			REV__ENSG00000188582|ENST00000340634|PAQR9	REV__ENSG00000188582|ENST00000340634|PAQR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3571166992188	2	574.354637	1146.69472	1.1072	0.0006359	1.0623	0.00061012	2.1694	0.001246	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.86452	1	10680	10680		30.504	2.6214	1	708140	+		8934	23014	6260	6266	10262	10262					0.1272410518133711
FKRKLFLK	8	Unmodified	_FKRKLFLK_					0	0	0			REV__ENST00000342992.10_3_2:179540701-179542581:-|nuORF	REV__ENST00000342992.10_3_2:179540701-179542581:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.358642578125	2	540.358037	1078.70152	0.33888	0.00018312	0.99737	0.00053894	1.3363	0.00072206	540.3583651603944	36.668	1.2319	36.608	36.237	37.469	-0.060333					76	35	3	0	0	0	0.81548	1	2073	2073		20.482	8.275	1	376760	+		8935	25286	6261	6267	10263	10263					0.16531786124210157
FKRRRPEVTVI	11	Unmodified	_FKRRRPEVTVI_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3;REV__ENST00000524227.5_1_8:41525962-41555361:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2447814941406	3	467.62101	1399.8412	2.793	0.0013061	3.3548	0.0015688	6.1478	0.0028749	467.6224014184081	104.98	1.831	104.94	104.65	106.48	-0.04039					92	43	4	0	0	0	0.17863	1	11717	11717		14.086	7.4264	1	266690	+		8936	20239;29680;29681;28156	6262	6268	10264	10264					0.15727498670776185
FKRSFLKG	8	Unmodified	_FKRSFLKG_					0	0	0			REV__nc|ENSG00000152454|Q9Y2P7-2|ZNF256	REV__nc|ENSG00000152454|Q9Y2P7-2|ZNF256	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.794677734375	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.85277	1	3327	3327		25.45	3.4903	1	2747400	+		8937	20298	6263	6269	10265	10265					0.08446074267999393
FKRSVRRN	8	Unmodified	_FKRSVRRN_					0	0	0		chr5:93585107-93585261|50|26.92|0.48|5.82|+|ENST00000647447|NR2F1,NR2F1;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1	chr5:93585107-93585261|50|26.92|0.48|5.82|+|ENST00000647447|NR2F1,NR2F1	chr5:93585107-93585261|50|26.92|0.48|5.82|+|ENST00000647447|NR2F1,NR2F1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.81689453125	2	531.817599	1061.62064	-1.5109	-0.00080353	0.089216	4.7447E-05	-1.4217	-0.00075608	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.86677	1	8616	8616		27.882	0	1	4022300			8938	462	6264	6270	10266	10266					0.09229898134049108
FKRWESERIL	10	Unmodified	_FKRWESERIL_					0	0	0		ENSG00000070718|ENST00000396926|AP3M2;nc|ENSG00000070718|P53677-2|AP3M2	ENSG00000070718|ENST00000396926|AP3M2	ENSG00000070718|ENST00000396926|AP3M2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.57110595703125	3	455.254216	1362.74082	-0.29838	-0.00013584	-2.5867	-0.0011776	-2.885	-0.0013134	455.25305077973036	29.109	0.61061	29.07	28.752	29.362	-0.039907					48	23	3	0	0	0	0.37624	1	1504	1504		16.007	4.5522	1	42225			8939	1249	6265	6271	10267	10267					0.07395841617130827
FKSISVTKITK	11	Unmodified	_FKSISVTKITK_					0	0	0		ENST00000477780.2_1_1:154247547-154247742:+|nuORF;ENST00000492550.1_1_1:154246365-154247742:+|nuORF;ENST00000459914.1_1_1:154247547-154248174:+|nuORF;nc|ENSG00000143575|O00165-5|HAX1;nc|ENSG00000143575|O00165-3|HAX1;ENSG00000143575|ENST00000328703|HAX1;nc|ENSG00000143575|O00165-2|HAX1	ENST00000477780.2_1_1:154247547-154247742:+|nuORF	ENST00000477780.2_1_1:154247547-154247742:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3900146484375	2	626.387188	1250.75982	0.92654	0.00058037	-2.4067	-0.0015075	-1.4802	-0.00092716	626.3854005656832	109.98	1.1023	110.05	109.78	110.88	0.073685					78	37	4	0	0	0	0.75164	1	11830	11830		21.686	0.73882	1	2583100			8940	4647	6266	6272	10268	10268					0.14447378188174298
FKSLLLPG	8	Unmodified	_FKSLLLPG_					0	0	0		ENST00000527186.1_1_11:118277438-118277540:+|nuORF	ENST00000527186.1_1_11:118277438-118277540:+|nuORF	ENST00000527186.1_1_11:118277438-118277540:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7680969238281	2	437.773471	873.53239	-1.7749	-0.000777	-3.644	-0.0015953	-5.4189	-0.0023723	437.7717830608177	42.434	1.7664	42.867	42.22	43.986	0.4334					93	43	3	0	0	0	0.87922	1	3764	3764		31.955	2.1133	1	1098100			8941	13274	6267	6273	10269	10269					0.0905646477085611
FKSYVRGC	8	Unmodified	_FKSYVRGC_					0	0	0		ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.245361328125	2	480.242012	958.469472	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.158	1	29.189	28.689	29.689	0.030945								0	0	0	0.29755	1	1423	1423		24.203	1.1603	1				8942	8508	6268	6274	10270	10270					-0.011424242888324443
FKTNAEPPR	9	Unmodified	_FKTNAEPPR_					0	0	0			REV__ENST00000489217.1_1_11:63679764-63680410:-|nuORF	REV__ENST00000489217.1_1_11:63679764-63680410:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2861328125	2	530.282723	1058.55089	1.1667	0.00061869	2.5048	0.0013282	3.6715	0.0019469	530.2840493625642	23.317	0.61845	22.922	22.568	23.186	-0.3946					21	14	2	0	0	0	0.73802	1	1017	1017		37.812	1.3648	1	61503	+		8943	21428	6269	6275	10271	10271					0.023959746747550525
FKTNAEPPR	9	Unmodified	_FKTNAEPPR_					0	0	0			REV__ENST00000489217.1_1_11:63679764-63680410:-|nuORF	REV__ENST00000489217.1_1_11:63679764-63680410:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	530.282723	1058.55089	0.79045	0.00041916	9.8234	0.0052092	10.614	0.0056283	530.7879345130425	23.195	0.056084	23.197	23.158	23.214	0.0018959	0.25781	0.0010375	NaN	37.812	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18632	+		8944	21428	6269	6275							0.023959746747550525
FKTNAEPPR	9	Unmodified	_FKTNAEPPR_					0	0	0			REV__ENST00000489217.1_1_11:63679764-63680410:-|nuORF	REV__ENST00000489217.1_1_11:63679764-63680410:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	530.282723	1058.55089	1.1667	0.00061869	2.5048	0.0013282	3.6715	0.0019469	530.2840493625642	23.317	0.61845	22.922	22.568	23.186	-0.3946	-0.017167	-0.0067244	NaN	37.812	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61503	+		8945	21428	6269	6275							0.023959746747550525
FKTNAEPPR	9	Unmodified	_FKTNAEPPR_					0	0	0			REV__ENST00000489217.1_1_11:63679764-63680410:-|nuORF	REV__ENST00000489217.1_1_11:63679764-63680410:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	530.282723	1058.55089	0.90576	0.00048031	2.1324	0.0011307	3.0381	0.0016111	530.2841390610826	23.273	0.51022	22.699	22.409	22.92	-0.57415	-0.24064	-0.0071193	NaN	37.812	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102130	+		8946	21428	6269	6275							0.023959746747550525
FKTRKRDEKER	11	Unmodified	_FKTRKRDEKER_					0	0	0		nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF	nc|ENSG00000082153|Q7L1Q6-2|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.28448486328125	3	498.282946	1491.82701	-1.6153	-0.00080489	1.6269	0.00081067	0.011616	5.788E-06	498.2836706814712	33.272	0.88227	33.271	32.947	33.829	-0.0016365					56	20	4	0	0	0	0.7896	1	1931	1931		13.508	1.5756	1	169750			8947	1479	6270	6276	10272	10272					0.10076801451805295
FKTYDRPLIL	10	Unmodified	_FKTYDRPLIL_					0	0	0		ENST00000474223.1_1_X:23803122-23803970:+|nuORF	ENST00000474223.1_1_X:23803122-23803970:+|nuORF	ENST00000474223.1_1_X:23803122-23803970:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5809631347656	3	422.579929	1264.71796	2.9692	0.0012547	1.8573	0.00078486	4.8265	0.0020396	422.58062707178027	97.728	3.629	97.776	96.312	99.941	0.048164					208	84	4	0	0	0	0.86014	1	10463	10463		23.378	4.8469	1	464700			8948	12301	6271	6277	10273	10273					0.09618822499669477
FKVASFRK	8	Unmodified	_FKVASFRK_					0	0	0		ENSG00000089220|ENST00000261313|PEBP1;ENST00000542939.1_1_12:118576827-118582605:+|nuORF	ENSG00000089220|ENST00000261313|PEBP1	ENSG00000089220|ENST00000261313|PEBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.3014221191406	2	491.795269	981.575986	-0.95582	-0.00047007	1.6941	0.00083313	0.73824	0.00036307	491.79612787684647	68.727	0.97743	68.792	68.154	69.131	0.065514					60	39	2	0	0	0	0.87064	1	6192	6192		29.15	0.89528	1	97450			8949	1618	6272	6278	10274	10274					0.08446074267999393
FKVAVLPQTYN	11	Unmodified	_FKVAVLPQTYN_					0	0	0			REV__ENSG00000129244|ENST00000250111|ATP1B2	REV__ENSG00000129244|ENST00000250111|ATP1B2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3584594726562	2	640.355888	1278.69722	1.5852	0.0010151	2.9459	0.0018864	4.5311	0.0029015	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.53361	1	10292	10292		49.536	6.6718	1	616450	+		8950	18813	6273	6279	10275	10275					0.06902232120000917
FKVLLPKIY	9	Unmodified	_FKVLLPKIY_					0	0	0		ENSG00000163521|ENST00000295759|GLB1L	ENSG00000163521|ENST00000295759|GLB1L	ENSG00000163521|ENST00000295759|GLB1L	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8693237304688	2	560.860078	1119.7056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.476	1	16.476	15.976	16.976	0								0	0	0	0.31472	1	126	126		25.45	5.4534	1				8951	5815	6274	6280	10276	10276					0.1505383082728713
FKVLSTLTVLS	11	Unmodified	_FKVLSTLTVLS_					0	0	0			REV__ENST00000531444.1_1_11:23427242-23427602:+|nuORF	REV__ENST00000531444.1_1_11:23427242-23427602:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.36669921875	2	604.368464	1206.72238	-1.2751	-0.00077064	-1.2835	-0.00077571	-2.5586	-0.0015464	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.73893	1	12735	12735		24.519	2.5593	1	3346600	+		8952	28302	6275	6281	10277	10277					0.12728286922560983
FKVPELYEIH	10	Unmodified	_FKVPELYEIH_					0	0	0		nc|ENSG00000186716|P11274-2|BCR;ENSG00000186716|ENST00000305877|BCR	nc|ENSG00000186716|P11274-2|BCR	nc|ENSG00000186716|P11274-2|BCR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	637.8428955078125	2	637.842613	1273.67067	0.42263	0.00026957	4.2135	0.0026875	4.6361	0.0029571	637.8452388757121	43.672	1.1051	43.729	43.397	44.503	0.056744					60	26	3	0	0	0	0.80179	1	3061	3061		39.253	2.8061	1	2414200			8953	7814	6276	6282	10278	10278					0.04478543228651688
FKVPFLHVF	9	Unmodified	_FKVPFLHVF_					0	0	0		ENST00000526627.1_1_5:150175531-150175765:+|nuORF	ENST00000526627.1_1_5:150175531-150175765:+|nuORF	ENST00000526627.1_1_5:150175531-150175765:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3300170898438	2	567.328945	1132.64334	-0.54401	-0.00030863	2.5399	0.0014409	1.9959	0.0011323	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.76996	1	8713	8713		33.516	1.9858	1	4477200			8954	13266	6277	6283	10279	10279					0.08232104478929614
FKVRERALLE	10	Unmodified	_FKVRERALLE_					0	0	0		nc|ENSG00000129317|Q9H0K6-2|PUS7L;ENSG00000129317|ENST00000344862|PUS7L	nc|ENSG00000129317|Q9H0K6-2|PUS7L	nc|ENSG00000129317|Q9H0K6-2|PUS7L	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.804443359375	2	630.874779	1259.73501	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.688	1	58.775	58.275	59.275	0.087002								0	0	0	0.45132	1	5001	5001		31.53	0	1				8955	3583	6278	6284	10280	10280					0.11552743105471563
FKVSGIMVLSL	11	Unmodified	_FKVSGIMVLSL_					0	0	0		ENST00000593539.1_1_19:53746712-53746805:-|nuORF	ENST00000593539.1_1_19:53746712-53746805:-|nuORF	ENST00000593539.1_1_19:53746712-53746805:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8561401367188	2	597.35176	1192.68897	2.4166	0.0014436	3.706	0.0022138	6.1226	0.0036574	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.60058	6	10126	9936;9959;10102;10126;10139;10244		44.377	4.7516	1	8047600			8956	14307	6279	6285	10281;10282;10283;10284;10285;10286	10284					0.10032961879028335
FKWLRNLKL	9	Unmodified	_FKWLRNLKL_					0	0	0			REV__ENST00000286428.5_1_X:154455532-154455562:+|nuORF	REV__ENST00000286428.5_1_X:154455532-154455562:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.5876159667969	3	406.588759	1216.74445	0.5758	0.00023411	-3.2662	-0.001328	-2.6904	-0.0010939	406.5873508642622	24.247	1.5285	24.302	23.869	25.398	0.055485					100	43	4	0	0	0	0.78983	1	847	847		27.882	1.8189	1	404210	+		8957	24640	6280	6286	10287	10287					0.1447455618163076
FLAICNPLR	9	Unmodified	_FLAICNPLR_					0	0	0		ENSG00000279111|ENST00000623167|OR10X1	ENSG00000279111|ENST00000623167|OR10X1	ENSG00000279111|ENST00000623167|OR10X1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7936401367188	2	523.794412	1045.57427	1.1929	0.00062481	-2.1817	-0.0011428	-0.98888	-0.00051797	523.7931742755334	19.706	1.4854	19.236	18.928	20.414	-0.46967					77	32	3	0	0	0	0.7932	1	559	559		24.203	0	1	1002100			8958	9042	6281	6287	10288	10288					0.053306971877191245
FLALASSSLLK	11	Unmodified	_FLALASSSLLK_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.3447875976562	2	575.347532	1148.68051	0.85707	0.00049311	-4.0816	-0.0023483	-3.2245	-0.0018552	575.345131550994	98.458	2.855	98.614	97.622	100.48	0.15659					162	65	5	0	0	0	0.7342	1	10283	10283		25.574	1.0549	1	2526400			8959	1076	6282	6288	10289	10289					0.11211731234061517
FLAQFLLVLH	10	Unmodified	_FLAQFLLVLH_					0	0	0		ENSG00000147894|ENST00000380003|C9orf72	ENSG00000147894|ENST00000380003|C9orf72	ENSG00000147894|ENST00000380003|C9orf72	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9112243652344	3	400.909498	1199.70667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.77	1	115.77	115.27	116.27	-0.0021133								0	0	0	0.45132	1	13927	13927		12.812	0.37888	1				8960	4928	6283	6289	10290	10290					0.11480045196185529
FLASLAKELK	10	Unmodified	_FLASLAKELK_					0	0	0			REV__ENST00000428239.5_1_1:91973461-91973863:+|nuORF	REV__ENST00000428239.5_1_1:91973461-91973863:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402709960938	2	560.342249	1118.66995	-1.4184	-0.0007948	-1.6522	-0.00092581	-3.0706	-0.0017206	560.3412485593329	105.6	1.2349	105.67	104.77	106	0.073112					105	30	5	0	0	0	0.86587	1	11118	11118		29.17	0	1	1607400	+		8961	26580	6284	6290	10291	10291					0.11535748579581195
FLATTLIKLQ	10	Unmodified	_FLATTLIKLQ_					0	0	0			REV__nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	REV__nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.357421875	2	574.357899	1146.70125	-1.0357	-0.00059487	-2.3996	-0.0013783	-3.4354	-0.0019731	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.86589	1	10602	10602		29.15	1.2673	1	715310	+		8962	18274	6285	6291	10292	10292					0.13376321613714026
FLAYVVWY	8	Unmodified	_FLAYVVWY_					0	0	0			REV__ENST00000591735.2_1_19:1491211-1495711:+|nuORF	REV__ENST00000591735.2_1_19:1491211-1495711:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.7786254882812	2	530.778754	1059.54295	-0.3325	-0.00017648	0.66438	0.00035264	0.33188	0.00017615	530.7789303124472	57.032	1.1704	57.429	57.029	58.199	0.39672					55	26	3	0	0	0	0.94009	1	5911	5911		54.895	15.642	1	3032800	+		8963	18099	6286	6292	10293	10293					0.015564474252869331
FLCNKNWAQ	9	Unmodified	_FLCNKNWAQ_					0	0	0		ENST00000259939.3_1_6:18465474-18465699:+|nuORF	ENST00000259939.3_1_6:18465474-18465699:+|nuORF	ENST00000259939.3_1_6:18465474-18465699:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.272216796875	2	562.271301	1122.52805	-0.14272	-8.0249E-05	2.5099	0.0014112	2.3671	0.001331	562.2724700731663	27.871	0.85773	27.774	27.403	28.261	-0.096947					27	19	2	0	0	0	0.62081	1	1650	1650		45.952	5.1738	1	342150			8964	9381	6287	6293	10294	10294					-0.028313677143842142
FLCSKYHLPK	10	Unmodified	_FLCSKYHLPK_					0	0	0			REV__ENST00000530152.5_1_2:170460551-170487284:+|nuORF	REV__ENST00000530152.5_1_2:170460551-170487284:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.660888671875	2	618.333901	1234.65325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.373	1	69.502	69.002	70.002	0.1291								0	0	0	0.45132	1	6277	6277		31.53	4.4825	1		+		8965	15737	6288	6294	10295	10295					0.045309244219879474
FLCVELLIL	9	Unmodified	_FLCVELLIL_					0	0	0			REV__ENSG00000147251|ENST00000276202|DOCK11	REV__ENSG00000147251|ENST00000276202|DOCK11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.817138671875	2	531.817021	1061.61949	1.2435	0.00066132	-1.184	-0.00062968	0.059483	3.1634E-05	531.8162466604691	101.09	1.2403	101.14	100.73	101.97	0.044823					55	29	3	0	0	0	0.76996	1	10898	10898		33.516	1.5607	1	527610	+		8966	20062	6289	6295	10296	10296					0.09114502930265189
FLDASGAKLDY	11	Unmodified	_FLDASGAKLDY_					0	0	0		nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF	nc|ENSG00000082153|Q7L1Q6-2|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	600.3035888671875	2	600.300778	1198.587	-0.53558	-0.00032151	0.42238	0.00025355	-0.1132	-6.7956E-05	600.300792356765	62.122	0.49461	62.112	61.918	62.413	-0.0094147					30	18	3	0	0	0	0.093139	3	5777	5758;5766;5777		94.409	32.302	1	296300			8967	1479	6290	6296	10297;10298;10299	10299					-0.004346129390341957
FLDASGAKLDY	11	Unmodified	_FLDASGAKLDY_					0	0	0		nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF	nc|ENSG00000082153|Q7L1Q6-2|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	600.2982788085938	2	600.300778	1198.587	0.48336	0.00029016	-0.83247	-0.00049973	-0.3491	-0.00020957	600.2999557792319	62.052	0.59755	62.019	61.774	62.371	-0.033173					44	21	3	0	0	0	0.1181	4	5858	5858;5868;5877;5887		89.029	33.53	1	340200			8968	1479	6290	6296	10300;10301;10302;10303	10300					-0.004346129390341957
FLDASGAKLDY	11	Unmodified	_FLDASGAKLDY_					0	0	0		nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF	nc|ENSG00000082153|Q7L1Q6-2|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	600.3009033203125	2	600.300778	1198.587	-2.0433	-0.0012266	1.9013	0.0011413	-0.14203	-8.5263E-05	600.3012957012457	61.934	0.5644	61.964	61.759	62.323	0.029575					53	22	3	0	0	0	0.025812	4	5777	5777;5787;5797;5805		106.88	40.93	1	291540			8969	1479	6290	6296	10304;10305;10306;10307	10304					-0.004346129390341957
FLDCCCCCCCE	11	Unmodified	_FLDCCCCCCCE_					0	0	0		ENSG00000170075|ENST00000367282|GPR37L1	ENSG00000170075|ENST00000367282|GPR37L1	ENSG00000170075|ENST00000367282|GPR37L1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	622.6561279296875	2	622.655711	1243.29687	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.548	1	66.594	66.094	67.094	0.045113								0	0	0	0.56276	1	5898	5898		5.5578	0	1				8970	6558	6291	6297	10308	10308					-0.31504650452575333
FLDESRSTQY	10	Unmodified	_FLDESRSTQY_					0	0	0		nc|ENSG00000183207|Q9Y230-2|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;ENSG00000183207|ENST00000595090|RUVBL2	nc|ENSG00000183207|Q9Y230-2|RUVBL2	nc|ENSG00000183207|Q9Y230-2|RUVBL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	623.290771484375	2	623.290942	1244.56733	0.015337	9.5596E-06	-0.3465	-0.00021597	-0.33116	-0.00020641	623.2906190110307	45.827	0.60799	45.808	45.49	46.098	-0.018585					23	14	2	0	0	0	0.17795	1	3637	3637		91.265	43.35	1	212810			8971	7508	6292	6298	10309	10309					-0.045169889497856275
FLDESRSTQY	10	Unmodified	_FLDESRSTQY_					0	0	0		nc|ENSG00000183207|Q9Y230-2|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;ENSG00000183207|ENST00000595090|RUVBL2	nc|ENSG00000183207|Q9Y230-2|RUVBL2	nc|ENSG00000183207|Q9Y230-2|RUVBL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	623.2902221679688	2	623.290942	1244.56733	-0.7279	-0.0004537	0.49403	0.00030793	-0.23387	-0.00014577	623.2911534381283	45.734	0.51566	45.703	45.495	46.01	-0.031067					24	11	3	0	0	0	0.19099	2	3720	3720;3746		88.177	13.922	1	157860			8972	7508	6292	6298	10310;10311	10310					-0.045169889497856275
FLDESRSTQY	10	Unmodified	_FLDESRSTQY_					0	0	0		nc|ENSG00000183207|Q9Y230-2|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;ENSG00000183207|ENST00000595090|RUVBL2	nc|ENSG00000183207|Q9Y230-2|RUVBL2	nc|ENSG00000183207|Q9Y230-2|RUVBL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	623.2907104492188	2	623.290942	1244.56733	-0.30829	-0.00019215	0.064952	4.0484E-05	-0.24333	-0.00015167	623.2909726346501	45.765	0.41191	45.761	45.577	45.989	-0.0041618					23	9	3	0	0	0	0.51401	1	3670	3670		54.722	1.3709	1	152600			8973	7508	6292	6298	10312	10312					-0.045169889497856275
FLDLAIWIP	9	Unmodified	_FLDLAIWIP_					0	0	0		ENST00000425974.5_1_2:13141789-13142648:-|nuORF	ENST00000425974.5_1_2:13141789-13142648:-|nuORF	ENST00000425974.5_1_2:13141789-13142648:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.3152465820312	2	544.312961	1086.61137	0.087837	4.7811E-05	1.9632	0.0010686	2.051	0.0011164	544.3139175848067	41.643	0.57133	41.612	41.338	41.909	-0.030991					26	13	3	0	0	0	0.76996	1	3058	3058		33.516	3.0119	1	230620			8974	11542	6293	6299	10313	10313					0.07152692005138306
FLDLTEQEF	9	Unmodified	_FLDLTEQEF_					0	0	0		ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L;ENSG00000100129|ENST00000652021|EIF3L;ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.2744140625	2	571.274229	1140.53391	0.22815	0.00013034	0.078944	4.5099E-05	0.3071	0.00017544	571.2740871021995	87.308	1.3616	87.755	87.389	88.75	0.44628					70	32	4	0	0	0	2.0213E-05	5	10259	10222;10233;10244;10259;10271		154.12	61.232	1	1651800			8975	11976;12763	6294	6300	10314;10315;10316;10317;10318	10317					-0.030739907217139262
FLDLTEQEF	9	Unmodified	_FLDLTEQEF_					0	0	0		ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L;ENSG00000100129|ENST00000652021|EIF3L;ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.2737426757812	2	571.274229	1140.53391	-0.45164	-0.00025801	0.5119	0.00029243	0.06026	3.4425E-05	571.274359603207	87.341	1.3135	87.804	87.476	88.79	0.46312					65	31	3	0	0	0	1.2037E-08	4	10277	10277;10289;10301;10315		162.25	62.878	1	1727300			8976	11976;12763	6294	6300	10319;10320;10321;10322	10319					-0.030739907217139262
FLDPRPLTV	9	Unmodified	_FLDPRPLTV_					0	0	0		ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.304931640625	2	529.305667	1056.59678	-0.052951	-2.8027E-05	0.92492	0.00048957	0.87197	0.00046154	529.3052374400041	63.465	1.2977	63.852	63.054	64.352	0.38687					64	29	3	0	0	0	0.67345	1	6834	6834		42.396	1.618	1	351660			8977	4261	6295	6301	10323	10323					0.07074619856962272
FLDTLKDLISD	11	Unmodified	_FLDTLKDLISD_					0	0	0		nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1	nc|ENSG00000100280|Q10567-3|AP1B1	nc|ENSG00000100280|Q10567-3|AP1B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3446044921875	2	640.342643	1278.67073	2.7219	0.001743	3.2473	0.0020794	5.9693	0.0038224	640.344890509357	103.09	0.62273	103.04	102.7	103.32	-0.047005					51	14	6	0	0	0	0.62614	1	11310	11310		41.427	6.2746	1	3077100			8978	1817	6296	6302	10324	10324					0.04254498437990151
FLDVADQHLL	10	Unmodified	_FLDVADQHLL_					0	0	0			REV__ENSG00000213463|ENST00000256366|SYNJ2BP	REV__ENSG00000213463|ENST00000256366|SYNJ2BP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.8134155273438	2	585.811313	1169.60807	-0.09269	-5.4299E-05	3.5348	0.0020707	3.4421	0.0020164	585.8133245326358	82.616	1.8039	83.09	82.278	84.082	0.47383					106	43	3	0	0	0	0.51302	1	9584	9584		54.776	3.5836	1	480470	+		8979	23618	6297	6303	10325	10325					0.030053971604729668
FLDVADQHLL	10	Unmodified	_FLDVADQHLL_					0	0	0			REV__ENSG00000213463|ENST00000256366|SYNJ2BP	REV__ENSG00000213463|ENST00000256366|SYNJ2BP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	585.811313	1169.60807	0.73881	0.00043281	1.9618	0.0011492	2.7006	0.001582	585.8126056193311	82.97	0.81982	83.125	82.793	83.613	0.15474	-0.039107	-0.0022202	NaN	54.776	24	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60193	+		8980	23618	6297	6303							0.030053971604729668
FLDVADQHLL	10	Unmodified	_FLDVADQHLL_					0	0	0			REV__ENSG00000213463|ENST00000256366|SYNJ2BP	REV__ENSG00000213463|ENST00000256366|SYNJ2BP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	585.811313	1169.60807	0.72676	0.00042575	1.9189	0.0011241	2.6457	0.0015499	585.8126417681469	83.201	1.1138	83.348	82.673	83.787	0.14694	0.1837	-0.0022705	NaN	54.776	36	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50659	+		8981	23618	6297	6303							0.030053971604729668
FLDVADQHLL	10	Unmodified	_FLDVADQHLL_					0	0	0			REV__ENSG00000213463|ENST00000256366|SYNJ2BP	REV__ENSG00000213463|ENST00000256366|SYNJ2BP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	585.811313	1169.60807	-1.1671	-0.00068373	4.3498	0.0025482	3.1827	0.0018644	585.813853162738	83.108	1.0219	83.234	82.709	83.731	0.12601	0.070223	0.00057767	NaN	54.776	29	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62409	+		8982	23618	6297	6303							0.030053971604729668
FLDVADQHLL	10	Unmodified	_FLDVADQHLL_					0	0	0			REV__ENSG00000213463|ENST00000256366|SYNJ2BP	REV__ENSG00000213463|ENST00000256366|SYNJ2BP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	585.811313	1169.60807	-1.1214	-0.00065695	4.4203	0.0025895	3.2989	0.0019325	585.813914813806	82.592	1.6416	83.023	82.357	83.998	0.43108	-0.14114	0.00066029	NaN	54.776	96	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	462010	+		8983	23618	6297	6303							0.030053971604729668
FLELGLAL	8	Unmodified	_FLELGLAL_					0	0	0		ENST00000434578.6_2_1:15541524-15541587:+|nuORF	ENST00000434578.6_2_1:15541524-15541587:+|nuORF	ENST00000434578.6_2_1:15541524-15541587:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26324462890625	2	438.265479	874.516405	-1.5746	-0.00069011	-4.2502	-0.0018627	-5.8249	-0.0025528	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.82464	1	3033	3033		21.702	0	1	22924000			8984	11697	6298	6304	10326	10326					0.07412758533939723
FLELLEFNIH	10	Unmodified	_FLELLEFNIH_					0	0	0		nc|ENSG00000284209|A0A8V8TMC4|CCNYL1B;nc|ENSG00000216671|P0C7X3|CCNYL3	nc|ENSG00000284209|A0A8V8TMC4|CCNYL1B	nc|ENSG00000284209|A0A8V8TMC4|CCNYL1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	637.845703125	2	637.842613	1273.67067	0.40796	0.00026022	4.1479	0.0026457	4.5558	0.0029059	637.8451725799487	43.684	1.2213	43.633	43.352	44.573	-0.051186					65	29	3	0	0	0	0.64457	1	3060	3060		47.657	7.5992	1	2487300			8985	15256	6299	6305	10327	10327					0.04478543228651688
FLELSTSTDD	10	Unmodified	_FLELSTSTDD_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.753662109375	2	564.258776	1126.503	-0.42613	-0.00024045	-4.4598	-0.0025165	-4.8859	-0.0027569	564.2562474858157	35.408	0.5579	35.352	35.002	35.56	-0.056015					18	12	2	0	0	0	0.37624	1	2299	2299		19.997	7.0376	1	97479	+		8986	20437;29946	6300	6306	10328	10328					-0.055191888266108435
FLETTLLVLGY	11	Unmodified	_FLETTLLVLGY_					0	0	0			REV__ENSG00000166111|ENST00000610966|SVOP	REV__ENSG00000166111|ENST00000610966|SVOP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8590087890625	2	634.860472	1267.70639	0.6555	0.00041615	-3.7082	-0.0023542	-3.0527	-0.0019381	634.8583430041269	59.573	0.43571	60.126	59.843	60.279	0.55323					23	10	3	0	0	0	0.68378	1	6313	6313		34.173	2.6427	1	419010	+		8987	21251	6301	6307	10329	10329					0.0832458068566666
FLFEMQNTM	9	2 Oxidation (M)	_FLFEM(Oxidation (M))QNTM(Oxidation (M))_		FLFEM(1)QNTM(1)		FLFEM(53)QNTM(53)	0	0	2			REV__ENST00000367800.8_1_6:135606646-135606742:-|nuORF	REV__ENST00000367800.8_1_6:135606646-135606742:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.7553100585938	2	596.754292	1191.49403	-2.1043	-0.0012557	3.6365	0.0021701	1.5322	0.00091435	596.7562804580269	42.966	0.87915	42.966	42.535	43.414	0.00016785					54	20	4	0	0	0	0.48102	1	3267	3267		52.937	8.8199	1	1234200	+		8988	25579	6302	6308	10330	10330		395;396			-0.09405576988274333
FLFFLCSL	8	Unmodified	_FLFFLCSL_					0	0	0		ENST00000535572.5_1_12:1018313-1018520:+|nuORF	ENST00000535572.5_1_12:1018313-1018520:+|nuORF	ENST00000535572.5_1_12:1018313-1018520:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.25738525390625	2	495.261882	988.509211	-1.7096	-0.00084669	-4.1064	-0.0020337	-5.816	-0.0028804	495.25992726495855	40.741	2.1466	41.33	40.797	42.943	0.58915					138	58	4	0	0	0	0.94132	1	3598	3598		54.765	0	1	7011700			8989	13425	6303	6309	10331	10331					0.014497026618528253
FLFFNIIHWCM	11	Unmodified	_FLFFNIIHWCM_					0	0	0		ENST00000368468.3_1_6:119499216-119499336:-|nuORF	ENST00000368468.3_1_6:119499216-119499336:-|nuORF	ENST00000368468.3_1_6:119499216-119499336:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.9105529785156	3	490.906883	1469.69882	-0.27794	-0.00013644	1.1044	0.00054216	0.82645	0.00040571	490.9077375522949	19.121	0.49985	19.047	18.896	19.396	-0.073704					15	12	2	0	0	0	0.75544	1	387	387		20.837	6.7511	1	15551			8990	10595	6304	6310	10332	10332					-0.017241733872424447
FLFKLVDHLIV	11	Unmodified	_FLFKLVDHLIV_					0	0	0			REV__nc|ENSG00000167723|Q8NET8-3|TRPV3	REV__nc|ENSG00000167723|Q8NET8-3|TRPV3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.943359375	3	448.607708	1342.80129	0.6314	0.00028325	2.7323	0.0012257	3.3637	0.001509	448.60887470875934	77.01	0.99304	77.058	76.682	77.675	0.047981					82	45	2	0	0	0	0.76579	1	7544	7544		18.531	0.69791	1	702210	+		8991	21425	6305	6311	10333	10333					0.14360558947487334
FLFLPAKRAS	10	Unmodified	_FLFLPAKRAS_					0	0	0			REV__ENST00000358064.3_1_12:14921846-14921969:-|nuORF	REV__ENST00000358064.3_1_12:14921846-14921969:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.34375	2	575.342584	1148.67061	0.97572	0.00056137	4.3533	0.0025046	5.329	0.003066	575.3449806461122	98.555	2.3295	98.603	98.055	100.38	0.048157					165	53	5	0	0	0	0.86589	1	10598	10598		29.15	3.6994	1	4316200	+		8992	25424	6306	6312	10334	10334					0.10222588019314571
FLFPCISVSH	10	Unmodified	_FLFPCISVSH_					0	0	0			REV__ENST00000596939.1_1_19:58233432-58238846:-|nuORF	REV__ENST00000596939.1_1_19:58233432-58238846:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2955932617188	2	575.291702	1148.56885	-0.38737	-0.00022285	1.4636	0.00084198	1.0762	0.00061913	575.2938552163392	76.272	2.3519	76.672	75.494	77.846	0.3997					143	62	4	0	0	0	0.43769	1	8563	8563		60.972	2.19	1	1387300	+		8993	29260	6307	6313	10335	10335					0.0005097360526633565
FLFRFVAL	8	Unmodified	_FLFRFVAL_					0	0	0			REV__ENST00000496962.1_1_2:85786016-85788551:-|nuORF	REV__ENST00000496962.1_1_2:85786016-85788551:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.7998962402344	2	506.802563	1011.59057	-0.49009	-0.00024838	-1.6283	-0.00082521	-2.1184	-0.0010736	506.80171853826346	50.706	1.8822	50.736	49.561	51.443	0.029629					72	54	2	0	0	0	0.83466	1	3964	3964		23.037	3.6767	1	171430	+		8994	18125	6308	6314	10336	10336					0.08524146416129952
FLGDKNKIQK	10	Unmodified	_FLGDKNKIQK_					0	0	0		ENST00000553865.1_1_14:99967676-99967772:+|nuORF	ENST00000553865.1_1_14:99967676-99967772:+|nuORF	ENST00000553865.1_1_14:99967676-99967772:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	595.8442993164062	2	595.84823	1189.68191	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.289	1	16.807	16.307	17.307	-0.48256								0	0	0	0.45132	1	240	240		47.657	1.6851	1				8995	13708	6309	6315	10337	10337					0.09465365322785146
FLGPYPFGID	10	Unmodified	_FLGPYPFGID_					0	0	0		ENST00000533005.5_1_11:67811756-67818283:+|nuORF;nc|ENSG00000110719|Q13488-2|TCIRG1;ENSG00000110719|ENST00000265686|TCIRG1	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.2879028320312	2	563.2844	1124.55425	1.4322	0.00080675	3.4717	0.0019556	4.9039	0.0027623	563.2863693868454	111.08	0.86829	111.11	110.92	111.79	0.030388					71	33	3	0	0	0	0.777	1	12181	12181		40.573	13.88	1	97124			8996	2537	6310	6316	10338	10338					-0.003047752712518559
FLGRLFLF	8	Unmodified	_FLGRLFLF_					0	0	0		ENSG00000188937|ENST00000378220|NYX	ENSG00000188937|ENST00000378220|NYX	ENSG00000188937|ENST00000378220|NYX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.80126953125	2	506.802563	1011.59057	0.2762	0.00013998	-3.6419	-0.0018457	-3.3657	-0.0017058	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.91005	1	3555	3555		42.474	0	1	416790			8997	7973	6311	6317	10339	10339					0.08524146416118583
FLGRYLRRKLI	11	Unmodified	_FLGRYLRRKLI_					0	0	0		nc|ENSG00000067798|Q8IVL0-3|NAV3;nc|ENSG00000067798|Q8IVL0-2|NAV3;ENSG00000067798|ENST00000397909|NAV3;chr12:78122428-78128706|43|33.09|0.78|5.4|+|ENST00000644176|NAV3,NAV3;chr12:78037386-78049993|40|13.68|0.61|4.48|+|ENST00000644176|NAV3,NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3087158203125	3	478.973384	1433.89832	0.065395	3.1322E-05	2.2352	0.0010706	2.3006	0.0011019	478.9743761165068	49.154	1.8702	49.148	48.387	50.257	-0.0056381					110	43	3	0	0	0	0.80813	1	4061	4061		9.6461	1.6118	1	187140			8998	1188	6312	6318	10340	10340					0.19872965947160992
FLGRYLRRKLI	11	Unmodified	_FLGRYLRRKLI_					0	0	0		nc|ENSG00000067798|Q8IVL0-3|NAV3;nc|ENSG00000067798|Q8IVL0-2|NAV3;ENSG00000067798|ENST00000397909|NAV3;chr12:78122428-78128706|43|33.09|0.78|5.4|+|ENST00000644176|NAV3,NAV3;chr12:78037386-78049993|40|13.68|0.61|4.48|+|ENST00000644176|NAV3,NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9748229980469	3	478.973384	1433.89832	0.0068331	3.2729E-06	2.4216	0.0011599	2.4284	0.0011632	478.9744559828599	50.975	1.3531	50.973	50.261	51.614	-0.0020447					59	37	2	0	0	0	0.80813	1	4367	4367		9.6461	0	1	175970			8999	1188	6312	6318	10341	10341					0.19872965947160992
FLGRYLRRKLI	11	Unmodified	_FLGRYLRRKLI_					0	0	0		nc|ENSG00000067798|Q8IVL0-3|NAV3;nc|ENSG00000067798|Q8IVL0-2|NAV3;ENSG00000067798|ENST00000397909|NAV3;chr12:78122428-78128706|43|33.09|0.78|5.4|+|ENST00000644176|NAV3,NAV3;chr12:78037386-78049993|40|13.68|0.61|4.48|+|ENST00000644176|NAV3,NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9730529785156	3	478.973384	1433.89832	-0.90027	-0.0004312	3.5043	0.0016784	2.604	0.0012472	479.3094231457841	50.589	1.3321	50.619	49.948	51.28	0.029629					91	40	3	0	0	0	0.80593	1	4020	4020		10.104	0.8921	1	250790			9000	1188	6312	6318	10342	10342					0.19872965947160992
FLGRYLRRKLI	11	Unmodified	_FLGRYLRRKLI_					0	0	0		nc|ENSG00000067798|Q8IVL0-3|NAV3;nc|ENSG00000067798|Q8IVL0-2|NAV3;ENSG00000067798|ENST00000397909|NAV3;chr12:78122428-78128706|43|33.09|0.78|5.4|+|ENST00000644176|NAV3,NAV3;chr12:78037386-78049993|40|13.68|0.61|4.48|+|ENST00000644176|NAV3,NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97393798828125	3	478.973384	1433.89832	0.29105	0.00013941	2	0.00095795	2.2911	0.0010974	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.7896	1	3303	3303		13.508	0	1	395190			9001	1188	6312	6318	10343	10343					0.19872965947160992
FLGRYLRRKLI	11	Unmodified	_FLGRYLRRKLI_					0	0	0		nc|ENSG00000067798|Q8IVL0-3|NAV3;nc|ENSG00000067798|Q8IVL0-2|NAV3;ENSG00000067798|ENST00000397909|NAV3;chr12:78122428-78128706|43|33.09|0.78|5.4|+|ENST00000644176|NAV3,NAV3;chr12:78037386-78049993|40|13.68|0.61|4.48|+|ENST00000644176|NAV3,NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.307373046875	3	478.973384	1433.89832	0.41435	0.00019846	1.9079	0.00091386	2.3223	0.0011123	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.78683	1	5096	5096		14.086	1.6532	1	131420			9002	1188	6312	6318	10344	10344					0.19872965947160992
FLGRYLRRKLI	11	Unmodified	_FLGRYLRRKLI_					0	0	0		nc|ENSG00000067798|Q8IVL0-3|NAV3;nc|ENSG00000067798|Q8IVL0-2|NAV3;ENSG00000067798|ENST00000397909|NAV3;chr12:78122428-78128706|43|33.09|0.78|5.4|+|ENST00000644176|NAV3,NAV3;chr12:78037386-78049993|40|13.68|0.61|4.48|+|ENST00000644176|NAV3,NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.58758544921875	3	478.973384	1433.89832	0.45261	0.00021679	1.2615	0.00060424	1.7141	0.00082103	479.3081338042784	49.221	2.5385	49.681	49.104	51.642	0.45983					81	61	2	0	0	0	0.1751	1	4740	4740		42.338	19.776	1	327160			9003	1188	6312	6318	10345	10345					0.19872965947160992
FLGRYLRRKLI	11	Unmodified	_FLGRYLRRKLI_					0	0	0		nc|ENSG00000067798|Q8IVL0-3|NAV3;nc|ENSG00000067798|Q8IVL0-2|NAV3;ENSG00000067798|ENST00000397909|NAV3;chr12:78122428-78128706|43|33.09|0.78|5.4|+|ENST00000644176|NAV3,NAV3;chr12:78037386-78049993|40|13.68|0.61|4.48|+|ENST00000644176|NAV3,NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.5875244140625	3	478.973384	1433.89832	-0.47576	-0.00022788	2.0336	0.00097406	1.5579	0.00074618	478.9743488390982	48.879	1.1246	49.783	49.33	50.454	0.90424					56	27	3	0	0	0	0.17273	1	4705	4705		36.318	0	1	378600			9004	1188	6312	6318	10346	10346					0.19872965947160992
FLGRYLRRKLI	11	Unmodified	_FLGRYLRRKLI_					0	0	0		nc|ENSG00000067798|Q8IVL0-3|NAV3;nc|ENSG00000067798|Q8IVL0-2|NAV3;ENSG00000067798|ENST00000397909|NAV3;chr12:78122428-78128706|43|33.09|0.78|5.4|+|ENST00000644176|NAV3,NAV3;chr12:78037386-78049993|40|13.68|0.61|4.48|+|ENST00000644176|NAV3,NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.5876770019531	3	478.973384	1433.89832	-1.3041	-0.00062461	3.5094	0.0016809	2.2053	0.0010563	479.30932479747634	47.794	1.0311	48.717	48.317	49.349	0.92315					58	25	3	0	0	0	0.17404	1	4681	4681		43.651	23.336	1	229950			9005	1188	6312	6318	10347	10347					0.19872965947160992
FLGWSVLN	8	Unmodified	_FLGWSVLN_					0	0	0		ENSG00000132915|ENST00000255266|PDE6A	ENSG00000132915|ENST00000255266|PDE6A	ENSG00000132915|ENST00000255266|PDE6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2540588378906	2	468.252903	934.491253	-0.11516	-5.3922E-05	4.166	0.0019507	4.0508	0.0018968	468.25473552954975	82.299	3.2758	82.365	81.1	84.376	0.06591					140	75	2	0	0	0	0.91005	1	8055	8055		42.474	1.9018	1	190410			9006	3841	6313	6319	10348	10348					0.021387037313729707
FLHFFYGDTTK	11	Unmodified	_FLHFFYGDTTK_					0	0	0			REV__ENST00000442655.2_1_4:9032265-9032511:+|nuORF	REV__ENST00000442655.2_1_4:9032265-9032511:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.7751159667969	3	459.227556	1374.66084	-0.10814	-4.966E-05	-1.5947	-0.00073231	-1.7028	-0.00078197	459.2274136495554	20.921	0.46883	20.293	20.162	20.631	-0.62834					13	12	2	0	0	0	0.17243	1	710	710		17.167	0.63689	1	26718	+		9007	26771	6314	6320	10349	10349					-0.011506447767260397
FLHRPTLL	8	Unmodified	_FLHRPTLL_					0	0	0		ENST00000532490.1_1_11:36022639-36250762:+|nuORF	ENST00000532490.1_1_11:36022639-36250762:+|nuORF	ENST00000532490.1_1_11:36022639-36250762:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8023986816406	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.884	1	4657	4657		33.516	1.5607	1	2118300			9008	13379	6315	6321	10350	10350					0.09366360785031702
FLHSIALIWPS	11	Unmodified	_FLHSIALIWPS_					0	0	0		ENST00000464577.1_1_1:22028060-22030944:-|nuORF	ENST00000464577.1_1_1:22028060-22030944:-|nuORF	ENST00000464577.1_1_1:22028060-22030944:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3631591796875	2	642.360973	1282.70739	2.0845	0.001339	1.3242	0.00085064	3.4088	0.0021897	642.361819653108	110.23	1.6844	110.29	109.66	111.35	0.054062					109	58	2	0	0	0	0.58425	2	13417	13417;13450		45.972	0	1	2848100			9009	12093	6316	6322	10351;10352	10351					0.07734839845215902
FLHSIIHK	8	Unmodified	_FLHSIIHK_					0	0	0			REV__ENSG00000030066|ENST00000378460|NUP160	REV__ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.7951354980469	2	497.795269	993.575986	-0.62467	-0.00031096	1.8609	0.00092635	1.2362	0.0006154	497.7959443257759	48.896	1.0734	48.921	48.637	49.71	0.025574					60	26	3	0	0	0	0.87479	1	3722	3722		30.504	3.7075	1	414050	+		9010	16272	6317	6323	10353	10353					0.07894074267983342
FLHSIIHK	8	Unmodified	_FLHSIIHK_					0	0	0			REV__ENSG00000030066|ENST00000378460|NUP160	REV__ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.79559326171875	2	497.795269	993.575986	-0.23858	-0.00011877	1.4256	0.00070966	1.187	0.00059089	497.79577554464987	49.055	0.99467	48.961	48.599	49.594	-0.093178					54	23	3	0	0	0	0.8347	1	3765	3765		23.042	2.5607	1	401360	+		9011	16272	6317	6323	10354	10354					0.07894074267983342
FLHVRTLP	8	Unmodified	_FLHVRTLP_					0	0	0			REV__nc|ENSG00000113073|Q96Q91-4|SLC4A9	REV__nc|ENSG00000113073|Q96Q91-4|SLC4A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7957763671875	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.884	1	4926	4926		33.516	0	1	792830	+		9012	17976	6318	6324	10355	10355					0.08446074267999393
FLIFRERRRRR	11	Unmodified	_FLIFRERRRRR_					0	0	0		ENST00000522214.1_1_5:65470720-65474693:+|nuORF	ENST00000522214.1_1_5:65470720-65474693:+|nuORF	ENST00000522214.1_1_5:65470720-65474693:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	535.3262939453125	3	535.662203	1603.96478	-1.4989	-0.0008029	-2.8963	-0.0015514	-4.3952	-0.0023543	535.6606816198545	109.1	0.28888	109.12	109.01	109.3	0.020561					20	13	2	0	0	0	0.1838	1	11646	11646		1.3219	0.17369	1	996850			9013	13184	6319	6325	10356	10356					0.18695594561745565
FLIFRERRRRR	11	Unmodified	_FLIFRERRRRR_					0	0	0		ENST00000522214.1_1_5:65470720-65474693:+|nuORF	ENST00000522214.1_1_5:65470720-65474693:+|nuORF	ENST00000522214.1_1_5:65470720-65474693:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	535.662203	1603.96478	0.028182	1.5096E-05	-4.1914	-0.0022452	-4.1633	-0.0022301	535.6599199880139	109.28	0.14014	109.4	109.37	109.51	0.12289	0.13911	-0.00072429	NaN	1.3219	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1840000			9014	13184	6319	6325							0.18695594561745565
FLIKVRPGLR	10	Unmodified	_FLIKVRPGLR_					0	0	0		ENST00000510104.5_1_5:140071123-140075505:+|nuORF	ENST00000510104.5_1_5:140071123-140075505:+|nuORF	ENST00000510104.5_1_5:140071123-140075505:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2616882324219	3	400.264276	1197.771	-1.9385	-0.00077589	-4.1676	-0.0016681	-6.106	-0.002444	400.26252179457975	15.298	0.23495	15.347	15.245	15.48	0.04908					10	7	2	0	0	0	0.86151	1	35	35		15.333	4.7463	1	59752			9015	13001	6320	6326	10357	10357					0.18002245072966616
FLILYQLLI	9	Unmodified	_FLILYQLLI_					0	0	0			REV__ENST00000578529.5_1_18:214628-260326:-|nuORF	REV__ENST00000578529.5_1_18:214628-260326:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.8021850585938	2	568.359911	1134.70527	-0.90964	-0.00051701	-2.2411	-0.0012737	-3.1507	-0.0017907	568.3586841181233	58.35	0.62649	58.742	58.397	59.024	0.39209					23	14	2	0	0	0	0.20789	1	6094	6094		30.504	4.9296	1	295450	+		9016	16777	6321	6327	10358	10358					0.1433041110742579
FLIMQNKVKLF	11	Oxidation (M)	_FLIM(Oxidation (M))QNKVKLF_		FLIM(1)QNKVKLF		FLIM(40)QNKVKLF	0	0	1			REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.6078796386719	3	466.272219	1395.79483	-1.3853	-0.00064593	4.2001	0.0019584	2.8148	0.0013125	466.2740652746618	69.612	0.45583	69.612	69.354	69.81	0					55	22	3	0	0	0	0.638	1	6204	6204		40.058	10.507	1	264910	+		9017	18859	6322	6328	10359	10359		274			0.11276297724475626
FLIMQNKVKLF	11	Oxidation (M)	_FLIM(Oxidation (M))QNKVKLF_		FLIM(1)QNKVKLF		FLIM(45)QNKVKLF	0	0	1			REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2734375	3	466.272219	1395.79483	-0.1189	-5.5442E-05	2.8387	0.0013236	2.7198	0.0012682	466.2734917225767	69.323	0.69171	69.35	69.021	69.713	0.026367					116	36	4	0	0	0	0.59499	1	6567	6567		45.022	6.3081	1	1232100	+		9018	18859	6322	6328	10360	10360		274			0.11276297724475626
FLIMQNKVKLF	11	Oxidation (M)	_FLIM(Oxidation (M))QNKVKLF_		FLIM(1)QNKVKLF		FLIM(48)QNKVKLF	0	0	1			REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2731018066406	3	466.272219	1395.79483	-0.72655	-0.00033877	3.419	0.0015942	2.6925	0.0012554	466.2737750957027	69.302	0.62726	69.265	68.943	69.57	-0.036957					102	31	4	0	0	0	0.55601	2	6719	6702;6719		47.96	11.642	1	1217300	+		9019	18859	6322	6328	10361;10362	10362		274			0.11276297724475626
FLIMQNKVKLF	11	Oxidation (M)	_FLIM(Oxidation (M))QNKVKLF_		FLIM(1)QNKVKLF		FLIM(55)QNKVKLF	0	0	1			REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.607666015625	3	466.272219	1395.79483	-0.93997	-0.00043828	3.5919	0.0016748	2.6519	0.0012365	466.27377457730927	69.175	0.66364	69.208	68.881	69.545	0.033005					105	31	4	0	0	0	0.45992	2	6633	6612;6633		54.722	17.214	1	1119300	+		9020	18859	6322	6328	10363;10364	10364		274			0.11276297724475626
FLIMQNKVKLF	11	Oxidation (M)	_FLIM(Oxidation (M))QNKVKLF_		FLIM(1)QNKVKLF		FLIM(53)QNKVKLF	0	0	1			REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2735900878906	3	466.272219	1395.79483	-1.0544	-0.00049162	3.7442	0.0017458	2.6899	0.0012542	466.27392611650356	69.039	0.77501	69.174	68.804	69.579	0.13521					98	34	4	0	0	0	0.48313	1	6214	6214		53.089	12.009	1	1223200	+		9021	18859	6322	6328	10365	10365		274			0.11276297724475626
FLIMQNKVKLF	11	Oxidation (M)	_FLIM(Oxidation (M))QNKVKLF_		FLIM(1)QNKVKLF		FLIM(55)QNKVKLF	0	0	1			REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.2729187011719	3	466.272219	1395.79483	0.48393	0.00022564	2.2098	0.0010303	2.6937	0.001256	466.27317302353543	69.056	0.67055	69.185	68.855	69.526	0.12838					101	28	5	0	0	0	0.45992	3	6232	6219;6232;6248		54.722	19.544	1	1342500	+		9022	18859	6322	6328	10366;10367;10368	10367		274			0.11276297724475626
FLIMQNKVKLF	11	Oxidation (M)	_FLIM(Oxidation (M))QNKVKLF_		FLIM(1)QNKVKLF		FLIM(48)QNKVKLF	0	0	1			REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2727966308594	3	466.272219	1395.79483	0.32932	0.00015355	1.6881	0.00078711	2.0174	0.00094067	466.2729394643504	67.873	0.9558	68.258	67.908	68.864	0.38482					68	22	4	0	0	0	0.55601	1	7450	7450		47.96	7.9014	1	1169300	+		9023	18859	6322	6328	10369	10369		274			0.11276297724475626
FLIMQNKVKLF	11	Oxidation (M)	_FLIM(Oxidation (M))QNKVKLF_					0	0	1			REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	466.272219	1395.79483	-1.3853	-0.00064593	4.2001	0.0019584	2.8148	0.0013125	466.2740652746618	69.612	0.45583	69.612	69.354	69.81	0	0.30936	0.0012352	NaN	54.722	55	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	264910	+		9024	18859	6322	6328				274			0.11276297724475626
FLISIPYSASI	11	Unmodified	_FLISIPYSASI_					0	0	0		ENSG00000158296|ENST00000279027|SLC13A3;ENST00000413164.6_1_20:45217879-45224950:-|nuORF;nc|ENSG00000158296|Q8WWT9-3|SLC13A3;nc|ENSG00000158296|Q8WWT9-6|SLC13A3	ENSG00000158296|ENST00000279027|SLC13A3	ENSG00000158296|ENST00000279027|SLC13A3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.8411254882812	2	605.839539	1209.66453	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.123	1	54.53	54.03	55.03	0.40663								0	0	0	0.56276	1	5496	5496		35.152	8.1047	1				9025	5471	6323	6329	10370	10370					0.06808024997144457
FLIWRLDGRFR	11	Unmodified	_FLIWRLDGRFR_					0	0	0			REV__ENST00000598485.6_2_19:41246882-41255486:-|nuORF	REV__ENST00000598485.6_2_19:41246882-41255486:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.7598571777344	3	493.617489	1477.83064	0.084387	4.1655E-05	-3.831	-0.0018911	-3.7467	-0.0018494	493.6155793513844	17.506	0.26682	16.895	16.706	16.972	-0.6107					9	5	2	0	0	0	0.18028	1	247	247		20.03	10.384	1	48438	+		9026	23005	6324	6330	10371	10371					0.11083516016356043
FLIWRLDGRFR	11	Unmodified	_FLIWRLDGRFR_					0	0	0			REV__ENST00000598485.6_2_19:41246882-41255486:-|nuORF	REV__ENST00000598485.6_2_19:41246882-41255486:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	493.617489	1477.83064	0.1164	5.746E-05	-4.616	-0.0022786	-4.4996	-0.0022211	493.61506117968855	17.419	0.27355	16.936	16.761	17.035	-0.48256	0.020369	-0.00076264	NaN	20.03	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37268	+		9027	23005	6324	6330							0.11083516016356043
FLIYRRKELQR	11	Unmodified	_FLIYRRKELQR_					0	0	0		ENST00000470609.5_1_17:48585906-48599496:+|nuORF;ENSG00000136449|ENST00000323776|MYCBPAP;nc|ENSG00000136449|Q8TBZ2|MYCBPAP	ENST00000470609.5_1_17:48585906-48599496:+|nuORF	ENST00000470609.5_1_17:48585906-48599496:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	507.9693603515625	3	507.971932	1520.89397	-0.52677	-0.00026758	-4.2829	-0.0021756	-4.8097	-0.0024432	507.9697227383378	16.604	0.60131	16.652	16.484	17.086	0.047802					78	25	5	0	0	0	0.77803	1	169	169		15.921	7.1213	1	1148900			9028	4112	6325	6331	10372	10372					0.15435456733598585
FLKFGRSK	8	Unmodified	_FLKFGRSK_					0	0	0			REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.29742431640625	2	491.795269	981.575986	-0.035071	-1.7248E-05	1.1757	0.00057819	1.1406	0.00056094	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.8621	1	5043	5043		26.693	8.3685	1	1625300	+		9029	21116	6326	6332	10373	10373					0.08446074267999393
FLKFGRSK	8	Unmodified	_FLKFGRSK_					0	0	0			REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79681396484375	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.89043	1	4698	4698		35.618	10.168	1	1898900	+		9030	21116	6326	6332	10374	10374					0.08446074267999393
FLKICFPA	8	Unmodified	_FLKICFPA_					0	0	0		ENST00000518836.5_1_5:158526443-158526685:-|nuORF	ENST00000518836.5_1_5:158526443-158526685:-|nuORF	ENST00000518836.5_1_5:158526443-158526685:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.7616882324219	2	469.762049	937.509546	0.18565	8.7212E-05	-1.1766	-0.00055271	-0.99093	-0.0004655	469.76127734615494	35.397	1.4141	35.503	35.2	36.614	0.10604					71	45	2	0	0	0	0.90024	1	1846	1846		39.021	1.8624	1	151100			9031	13123	6327	6333	10375	10375					0.03829122381716843
FLKKSKKKEKV	11	Unmodified	_FLKKSKKKEKV_					0	0	0		ENSG00000075340|ENST00000264436|ADD2	ENSG00000075340|ENST00000264436|ADD2	ENSG00000075340|ENST00000264436|ADD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.30194091796875	3	454.965895	1361.87586	0.23468	0.00010677	3.0433	0.0013846	3.2779	0.0014914	454.9671366165866	42.722	1.2899	42.787	42.116	43.406	0.065037					92	35	4	0	0	0	0.79224	1	2892	2892		12.957	2.8536	1	367580			9032	1331	6328	6334	10376	10376					0.20939321758851293
FLKLVGRFAP	10	Unmodified	_FLKLVGRFAP_					0	0	0		nc|ENSG00000198885|Q6GPH6-3|ITPRIPL1;ENSG00000198885|ENST00000439118|ITPRIPL1;nc|ENSG00000198885|Q6GPH6-2|ITPRIPL1	nc|ENSG00000198885|Q6GPH6-3|ITPRIPL1	nc|ENSG00000198885|Q6GPH6-3|ITPRIPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3572998046875	2	574.352951	1146.69135	2.697	0.001549	2.452	0.0014083	5.149	0.0029574	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.86589	1	10933	10933		29.15	0	1	738540			9033	8357	6329	6335	10377	10377					0.12387178399012555
FLKRKFAS	8	Unmodified	_FLKRKFAS_					0	0	0			REV__ENST00000551983.1_1_12:104335630-104337190:+|nuORF	REV__ENST00000551983.1_1_12:104335630-104337190:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.80389404296875	2	498.803094	995.591636	-1.4653	-0.00073091	2.6111	0.0013024	1.1457	0.00057149	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.87479	1	4416	4416		30.504	3.7075	1	2964600	+		9034	28615	6330	6336	10378	10378					0.09366360785031702
FLKRKLKF	8	Unmodified	_FLKRKLKF_					0	0	0			REV__ENSG00000109911|ENST00000640961|ELP4	REV__ENSG00000109911|ENST00000640961|ELP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.3636474609375	2	540.358037	1078.70152	-0.09847	-5.3209E-05	1.2862	0.00069503	1.1878	0.00064182	540.3585531343375	36.951	1.7168	36.927	36.371	38.088	-0.023979					87	38	3	0	0	0	0.86294	1	2359	2359		8.8223	0	1	433100	+		9035	17779	6331	6337	10379	10379					0.16531786124232895
FLKSNEKKI	9	Unmodified	_FLKSNEKKI_					0	0	0			REV__nc|ENSG00000198625|O15151-4|MDM4	REV__nc|ENSG00000198625|O15151-4|MDM4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8302001953125	2	553.832049	1105.64954	0.37109	0.00020552	-3.8764	-0.0021469	-3.5053	-0.0019414	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.67345	1	10277	10277		42.396	8.2236	1	1786500	+		9036	23346	6332	6338	10380	10380					0.10094577919812764
FLLDRALAN	9	Unmodified	_FLLDRALAN_					0	0	0		ENSG00000171608|ENST00000377346|PIK3CD	ENSG00000171608|ENST00000377346|PIK3CD	ENSG00000171608|ENST00000377346|PIK3CD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.79345703125	2	516.795466	1031.57638	-0.87095	-0.0004501	-3.3844	-0.001749	-4.2553	-0.0021991	516.7937641781077	86.407	2.8089	86.407	84.831	87.64	0					132	64	4	0	0	0	0.78536	1	8331	8331		29.15	2.4566	1	210980			9037	6687	6333	6339	10381	10381					0.061854491971644165
FLLELRLSA	9	Unmodified	_FLLELRLSA_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.3185424804688	2	531.321317	1060.62808	-0.6637	-0.00035264	-2.8491	-0.0015138	-3.5128	-0.0018664	531.319555565115	95.322	2.6544	95.322	94.812	97.466	0					162	61	5	0	0	0	0.7932	1	9545	9545		25.574	4.6271	1	1864100	+		9038	29748	6334	6340	10382	10382					0.10019192891104467
FLLELRLSA	9	Unmodified	_FLLELRLSA_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.318603515625	2	531.321317	1060.62808	-0.033063	-1.7567E-05	-3.6466	-0.0019375	-3.6797	-0.0019551	531.3191547732448	95.172	2.5483	95.24	94.714	97.262	0.068336					181	59	5	0	0	0	0.7932	1	10008	10008		26.693	2.1737	1	3878900	+		9039	29748	6334	6340	10383	10383					0.10019192891104467
FLLELRLSA	9	Unmodified	_FLLELRLSA_					0	0	0			REV__nc|ENSG00000102606|Q14155|ARHGEF7	REV__nc|ENSG00000102606|Q14155|ARHGEF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.3182373046875	2	531.321317	1060.62808	-1.5129	-0.00080386	-2.153	-0.0011439	-3.6659	-0.0019478	531.3198552399973	94.964	2.533	95.167	94.65	97.183	0.20242					171	59	5	0	0	0	0.77696	2	9714	9665;9714		31.53	4.8369	1	2353400	+		9040	29748	6334	6340	10384;10385	10385					0.10019192891104467
FLLHMLKNT	9	Unmodified	_FLLHMLKNT_					0	0	0		ENST00000414070.1_1_1:109535017-109535455:+|nuORF	ENST00000414070.1_1_1:109535017-109535455:+|nuORF	ENST00000414070.1_1_1:109535017-109535455:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.8178100585938	2	558.815344	1115.61614	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.21	1	114.27	113.77	114.77	0.061073								0	0	0	0.34024	1	12216	12216		17.365	0.89182	1				9041	11360	6335	6341	10386	10386					0.06295252876248014
FLLHSVLQS	9	Unmodified	_FLLHSVLQS_					0	0	0			REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.656494140625	2	522.297842	1042.58113	0.58344	0.00030473	-0.55237	-0.0002885	0.031076	1.6231E-05	522.2972221852729	53.295	0.53544	53.708	53.332	53.868	0.4139					25	12	3	0	0	0	0.20789	1	5330	5330		14.865	3.3539	1	194860	+		9042	16637	6336	6342	10387	10387					0.06154333339964069
FLLHSVLQS	9	Unmodified	_FLLHSVLQS_					0	0	0			REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	522.297842	1042.58113	-0.091347	-4.771E-05	-1.5108	-0.0007891	-1.6022	-0.00083681	522.29678888255	52.971	0.45261	53.586	53.408	53.86	0.61436	-0.061418	-0.00079598	NaN	14.865	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176960	+		9043	16637	6336	6342							0.06154333339964069
FLLILHSTN	9	Unmodified	_FLLILHSTN_					0	0	0		ENSG00000181544|ENST00000650831|FANCB	ENSG00000181544|ENST00000650831|FANCB	ENSG00000181544|ENST00000650831|FANCB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.3063354492188	2	529.305667	1056.59678	-0.052951	-2.8027E-05	0.92492	0.00048957	0.87197	0.00046154	529.3052374400041	63.465	1.2977	63.852	63.054	64.352	0.38687					64	29	3	0	0	0	0.47272	1	6846	6846		53.351	1.0523	1	351660			9044	7392	6337	6343	10388	10388					0.0707461985698501
FLLLQRKNLRR	11	Unmodified	_FLLLQRKNLRR_					0	0	0		ENSG00000146233|ENST00000275016|CYP39A1	ENSG00000146233|ENST00000275016|CYP39A1	ENSG00000146233|ENST00000275016|CYP39A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.29302978515625	3	486.312288	1455.91504	0.071252	3.4651E-05	-3.7996	-0.0018478	-3.7284	-0.0018131	486.31116099431836	21.16	0.12139	21.241	21.143	21.264	0.081615					6	4	2	0	0	0	0.18066	1	570	570		19.263	0.73163	1	22212			9045	4828	6338	6344	10389	10389					0.20531466833108425
FLLQGGLHK	9	Unmodified	_FLLQGGLHK_					0	0	0			REV__ENSG00000164161|ENST00000296575|HHIP	REV__ENSG00000164161|ENST00000296575|HHIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.7990417480469	2	506.800552	1011.58655	-0.49867	-0.00025273	1.4784	0.00074926	0.97973	0.00049653	506.80125930962566	45.611	0.78478	45.623	45.395	46.179	0.012058					40	21	2	0	0	0	0.7932	1	3295	3295		23.042	0	1	207840	+		9046	21040	6339	6345	10390	10390					0.08122056922422871
FLLRGGGP	8	Unmodified	_FLLRGGGP_					0	0	0		nc|ENSG00000099889|O00192-2|ARVCF;ENSG00000099889|ENST00000263207|ARVCF;ENST00000487793.5_1_22:19968732-19974706:-|nuORF;ENST00000473551.5_1_22:19968732-19978281:-|nuORF	nc|ENSG00000099889|O00192-2|ARVCF	nc|ENSG00000099889|O00192-2|ARVCF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.7393493652344	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.88915	3	1945	1935;1945;1957		46.766	6.9464	1	1364200			9047	1773	6340	6346	10391;10392;10393	10392					0.050258542797678274
FLLRGGGP	8	Unmodified	_FLLRGGGP_					0	0	0		nc|ENSG00000099889|O00192-2|ARVCF;ENSG00000099889|ENST00000263207|ARVCF;ENST00000487793.5_1_22:19968732-19974706:-|nuORF;ENST00000473551.5_1_22:19968732-19978281:-|nuORF	nc|ENSG00000099889|O00192-2|ARVCF	nc|ENSG00000099889|O00192-2|ARVCF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7395935058594	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.86791	1	1986	1986		28.254	4.0515	1	1654100			9048	1773	6340	6346	10394	10394					0.050258542797678274
FLLRTPPAS	9	Unmodified	_FLLRTPPAS_					0	0	0			REV__ENST00000289081.7_1_9:97861422-97861515:-|nuORF	REV__ENST00000289081.7_1_9:97861422-97861515:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2901611328125	2	501.292559	1000.57057	-0.52377	-0.00026256	-3.845	-0.0019275	-4.3688	-0.00219	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.76255	1	8444	8444		35.618	4.0885	1	2929300	+		9049	24650	6341	6347	10395	10395					0.07030350685511166
FLLRTPPAS	9	Unmodified	_FLLRTPPAS_					0	0	0			REV__ENST00000289081.7_1_9:97861422-97861515:-|nuORF	REV__ENST00000289081.7_1_9:97861422-97861515:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904968261719	2	501.292559	1000.57057	-0.36653	-0.00018374	-3.8537	-0.0019318	-4.2202	-0.0021156	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.71772	1	9056	9056		39.253	5.3312	1	9903700	+		9050	24650	6341	6347	10396	10396					0.07030350685511166
FLLTQRRAPV	10	Unmodified	_FLLTQRRAPV_					0	0	0			REV__ENSG00000105671|ENST00000247003|DDX49	REV__ENSG00000105671|ENST00000247003|DDX49	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9161376953125	3	400.911902	1199.71388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.69	1	113.71	113.21	114.21	0.020027								0	0	0	0.45132	1	13726	13726		20.837	2.3061	1		+		9051	17560	6342	6348	10397	10397					0.12200777796579132
FLLWNMGELQ	10	Oxidation (M)	_FLLWNM(Oxidation (M))GELQ_		FLLWNM(1)GELQ		FLLWNM(46)GELQ	0	0	1			REV__ENSG00000124177|ENST00000373233|CHD6	REV__ENSG00000124177|ENST00000373233|CHD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.8141479492188	2	633.812999	1265.61144	-0.74532	-0.0004724	3.9011	0.0024726	3.1558	0.0020002	633.8153934693904	75.753	0.80846	75.841	75.424	76.232	0.087639					62	21	4	0	0	0	0.67571	1	7048	7048		45.972	7.2186	1	337910	+		9052	18564	6343	6349	10398	10398		269			-0.010736760571717241
FLMDHVFIQ	9	Unmodified	_FLMDHVFIQ_					0	0	0		nc|ENSG00000292277|Q9UJ98-3|STAG3;nc|ENSG00000292277|Q9UJ98|STAG3;ENSG00000066923|ENST00000615138|STAG3	nc|ENSG00000292277|Q9UJ98-3|STAG3	nc|ENSG00000292277|Q9UJ98-3|STAG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2925415039062	2	575.291702	1148.56885	-0.40049	-0.0002304	1.2118	0.00069716	0.81135	0.00046676	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.51307	1	8596	8596		51.335	4.8787	1	1396200			9053	1170	6344	6350	10399	10399					0.0005097360526633565
FLPAPKKR	8	Unmodified	_FLPAPKKR_					0	0	0		ENST00000409365.5_2_2:183291437-183291587:-|nuORF	ENST00000409365.5_2_2:183291437-183291587:-|nuORF	ENST00000409365.5_2_2:183291437-183291587:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8058166503906	2	478.805637	955.596721	-1.2024	-0.0005757	2.6266	0.0012576	1.4242	0.00068191	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.81548	1	2865	2865		20.482	1.1219	1	361300			9054	11307	6345	6351	10400	10400					0.11714664647661266
FLPFLVLL	8	Unmodified	_FLPFLVLL_					0	0	0		nc|ENSG00000123643|Q7Z2H8-4|SLC36A1;nc|ENSG00000186335|Q495M3-2|SLC36A2;nc|ENSG00000123643|Q7Z2H8-3|SLC36A1;ENSG00000123643|ENST00000243389|SLC36A1;ENSG00000186335|ENST00000335244|SLC36A2	nc|ENSG00000123643|Q7Z2H8-4|SLC36A1	nc|ENSG00000123643|Q7Z2H8-4|SLC36A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.77679443359375	2	481.30969	960.604826	-0.48491	-0.00023339	3.2362	0.0015576	2.7512	0.0013242	481.31114121103695	19.408	1.5808	18.778	18.319	19.9	-0.6296					45	34	2	0	0	0	0.4196	1	498	498		16.705	0	1	121190			9055	3287	6346	6352	10401	10401					0.1229479884441389
FLPKAPPM	8	Unmodified	_FLPKAPPM_					0	0	0			REV__ENST00000372398.5_1_9:132996136-132996268:+|nuORF	REV__ENST00000372398.5_1_9:132996136-132996268:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7553405761719	2	450.754224	899.493896	0.36741	0.00016561	-0.070446	-3.1754E-05	0.29697	0.00013386	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.86791	1	8111	8111		28.254	1.4582	1	394230	+		9056	25717	6347	6353	10402	10402					0.040128358646711604
FLPNGGLRSWP	11	Unmodified	_FLPNGGLRSWP_					0	0	0			REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF	REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	622.3360595703125	2	622.332747	1242.65094	0.92215	0.00057388	4.2947	0.0026727	5.2168	0.0032466	622.3353656698207	110.48	0.86303	110.55	110.31	111.17	0.073685					59	28	3	0	0	0	0.61369	1	11884	11884		42.864	21.179	1	819510	+		9057	17656	6348	6354	10403	10403					0.03932212008589886
FLPPWLAG	8	Unmodified	_FLPPWLAG_					0	0	0		ENSG00000101204|ENST00000370263|CHRNA4;nc|ENSG00000101204|P43681-2|CHRNA4	ENSG00000101204|ENST00000370263|CHRNA4	ENSG00000101204|ENST00000370263|CHRNA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7552490234375	2	450.752539	899.490525	-0.14135	-6.3713E-05	3.8471	0.0017341	3.7058	0.0016704	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.88393	1	8169	8169		33.493	0.68056	1	337080			9058	1913	6349	6355	10404	10404					0.03675909082335238
FLPRHRKLKE	10	Unmodified	_FLPRHRKLKE_					0	0	0		ENSG00000188895|ENST00000398532|MSL1	ENSG00000188895|ENST00000398532|MSL1	ENSG00000188895|ENST00000398532|MSL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9392395019531	3	441.938451	1322.79352	-1.4739	-0.00065135	4.427	0.0019565	2.9532	0.0013051	441.94028424164003	56.309	0.61998	56.381	55.844	56.464	0.071835					69	31	3	0	0	0	0.86551	1	4736	4736		14.694	1.1857	1	795270			9059	7969	6350	6356	10405	10405					0.1450384447059605
FLPSFLEISRA	11	Unmodified	_FLPSFLEISRA_					0	0	0		ENST00000496769.1_1_1:157670257-157670530:-|nuORF	ENST00000496769.1_1_1:157670257-157670530:-|nuORF	ENST00000496769.1_1_1:157670257-157670530:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.35791015625	2	640.355888	1278.69722	1.5776	0.0010102	3.0157	0.0019311	4.5934	0.0029414	640.3576428069522	98.956	2.793	99.317	98.237	101.03	0.36136					173	69	3	0	0	0	0.64498	1	11966	11966		39.253	2.8061	1	1011800			9060	12792	6351	6357	10406	10406					0.0690223211997818
FLPVFDIVI	9	Unmodified	_FLPVFDIVI_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23;ENST00000479213.1_1_6:131914123-131917288:-|nuORF	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.81640625	2	531.815336	1061.61612	1.0705	0.00056928	1.9382	0.0010308	3.0087	0.0016001	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.7932	1	10241	10241		25.45	1.2474	1	4490200			9061	2649	6352	6358	10407	10407					0.08777576147872423
FLQGFKGQ	8	Unmodified	_FLQGFKGQ_					0	0	0		ENST00000469698.5_1_17:39981777-39991902:-|nuORF;nc|ENSG00000141698|Q969T7-2|NT5C3B;ENSG00000141698|ENST00000435506|NT5C3B	ENST00000469698.5_1_17:39981777-39991902:-|nuORF	ENST00000469698.5_1_17:39981777-39991902:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	462.7508850097656	2	462.750527	923.486502	-0.7843	-0.00036294	0.51895	0.00024014	-0.26536	-0.00012279	462.75053665918585	47.326	0.48594	47.299	47.027	47.513	-0.026737					23	14	2	0	0	0	0.93529	1	3956	3956		52.299	2.8576	1	200280			9062	4524	6353	6359	10408	10408					0.021698195886074245
FLQMIEQATP	10	Unmodified	_FLQMIEQATP_					0	0	0			REV__nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2	REV__nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.30078125	2	589.299724	1176.5849	-0.24795	-0.00014612	3.3522	0.0019755	3.1043	0.0018294	589.301562411532	110.39	1.2046	110.39	110.16	111.36	0					63	36	3	0	0	0	0.76096	1	11477	11477		41.427	11.109	1	574490	+		9063	30039	6354	6360	10409	10409					0.003666350515004524
FLQYGVSSL	9	Unmodified	_FLQYGVSSL_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.2672119140625	2	507.26875	1012.52295	1.6733	0.00084884	-3.9589	-0.0020082	-2.2856	-0.0011594	507.2673076437526	51.086	1.1107	51.838	51.491	52.601	0.75174					45	26	3	0	0	0	0.55097	1	5081	5081		49.442	5.0644	1	1853200	+		9064	23288	6355	6361	10410	10410					0.017186516946708252
FLRAPAAV	8	Unmodified	_FLRAPAAV_					0	0	0		nc|ENSG00000120256|Q86VZ4-2|LRP11;ENSG00000120256|ENST00000239367|LRP11	nc|ENSG00000120256|Q86VZ4-2|LRP11;ENSG00000120256|ENST00000239367|LRP11	ENSG00000120256|ENST00000239367|LRP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.7557373046875	2	422.755613	843.496673	0.66355	0.00028052	-0.13054	-5.5185E-05	0.53302	0.00022534	422.7554517175375	57.439	1.3239	57.994	57.642	58.966	0.55512					58	32	3	0	0	0	0.86791	1	5991	5991		28.254	0	1	1986200			9065	14874;3120	6356	6362	10411	10411					0.06866427313832446
FLRCRRLPVLA	11	Unmodified	_FLRCRRLPVLA_					0	0	0		ENST00000264716.8_1_2:28616232-28616613:+|nuORF	ENST00000264716.8_1_2:28616232-28616613:+|nuORF	ENST00000264716.8_1_2:28616232-28616613:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.6086730957031	3	448.607936	1342.80198	-1.3124	-0.00058875	4.4717	0.0020061	3.1593	0.0014173	448.6097327049683	74.956	1.1468	75.082	74.623	75.77	0.12545					89	30	4	0	0	0	0.78391	1	6978	6978		14.694	1.1857	1	427440			9066	9487	6357	6363	10412	10412					0.14429075115572232
FLRGLLFGKSA	11	Unmodified	_FLRGLLFGKSA_					0	0	0		ENST00000483153.1_1_1:110257451-110260045:+|nuORF;ENSG00000134201|ENST00000256593|GSTM5	ENST00000483153.1_1_1:110257451-110260045:+|nuORF	ENST00000483153.1_1_1:110257451-110260045:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3526000976562	2	604.861141	1207.70773	-1.0601	-0.00064122	-3.775	-0.0022834	-4.8352	-0.0029246	604.8590287609827	81.871	2.3278	81.986	81.043	83.371	0.11426					72	54	2	0	0	0	0.72739	1	7869	7869		27.047	11.406	1	398390			9067	3914	6358	6364	10413	10413					0.11218259565089284
FLRGYLTKAM	10	Unmodified	_FLRGYLTKAM_					0	0	0			REV__ENSG00000095777|ENST00000642920|MYO3A	REV__ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	600.3353881835938	2	600.333901	1198.65325	-0.53491	-0.00032112	0.56847	0.00034127	0.033565	2.015E-05	600.3340485202916	94.432	2.5436	94.5	93.254	95.798	0.068336					116	60	2	0	0	0	0.8608	1	9859	9859		34.173	1.3601	1	428900	+		9068	17068	6359	6365	10414	10414					0.06186924421990625
FLRKAYTK	8	Unmodified	_FLRKAYTK_					0	0	0		ENSG00000149782|ENST00000279230|PLCB3;nc|ENSG00000149782|Q01970-2|PLCB3	ENSG00000149782|ENST00000279230|PLCB3	ENSG00000149782|ENST00000279230|PLCB3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8092041015625	2	513.808377	1025.6022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.145	1	58.115	57.615	58.615	-0.029865								0	0	0	0.29978	1	5394	5394		21.96	0	1				9069	5050	6360	6366	10415	10415					0.0904234343945518
FLRKFIPVM	9	Unmodified	_FLRKFIPVM_					0	0	0		ENSG00000197763|ENST00000524230|TXNRD3;ENST00000524230.6_3_3:126326756-126373974:-|nuORF	ENSG00000197763|ENST00000524230|TXNRD3	ENSG00000197763|ENST00000524230|TXNRD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.843017578125	2	575.843905	1149.67326	0.78302	0.0004509	-2.431	-0.0013999	-1.6479	-0.00094896	575.8423757005949	90.383	2.7025	90.537	88.725	91.427	0.15388					214	64	4	0	0	0	0.3636	1	8962	8962		60.294	16.177	1	2399100			9070	8196	6361	6367	10416	10416					0.10440720152632821
FLRKFIPVM	9	Unmodified	_FLRKFIPVM_					0	0	0		ENSG00000197763|ENST00000524230|TXNRD3;ENST00000524230.6_3_3:126326756-126373974:-|nuORF	ENSG00000197763|ENST00000524230|TXNRD3	ENSG00000197763|ENST00000524230|TXNRD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.8429565429688	2	575.843905	1149.67326	0.47616	0.00027419	-3.0183	-0.0017381	-2.5422	-0.0014639	575.8420203793453	90.225	2.3894	90.676	89.242	91.632	0.45058					94	60	2	0	0	0	0.77546	1	10760	10760		31.955	6.3808	1	1893600			9071	8196	6361	6367	10417	10417					0.10440720152632821
FLRKFTSK	8	Unmodified	_FLRKFTSK_					0	0	0			REV__ENSG00000099331|ENST00000682292|MYO9B	REV__ENSG00000099331|ENST00000682292|MYO9B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8068237304688	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.90089	1	3832	3832		39.253	3.6345	1	1550000	+		9072	17092	6362	6368	10418	10418					0.0904234343945518
FLRKPNVA	8	Unmodified	_FLRKPNVA_					0	0	0		ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7907409667969	2	472.787444	943.560336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.25	1	115.23	114.73	115.73	-0.02433								0	0	0	0.30125	1	12767	12767		20.482	0	1				9073	9016	6363	6369	10419	10419					0.08629787750930973
FLRLGPGG	8	Unmodified	_FLRLGPGG_					0	0	0			REV__ENST00000490936.5_1_X:153577219-153578780:-|nuORF	REV__ENST00000490936.5_1_X:153577219-153578780:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.7398986816406	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.86288	1	2075	2075		26.796	1.3459	1	1364200	+		9074	27646	6364	6370	10420	10420					0.050258542797678274
FLRLTEKIVC	10	Unmodified	_FLRLTEKIVC_					0	0	0			REV__ENST00000502665.1_1_4:187126176-187131792:+|nuORF	REV__ENST00000502665.1_1_4:187126176-187131792:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.35498046875	2	611.354834	1220.69511	-0.40518	-0.00024771	2.2197	0.001357	1.8145	0.0011093	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.8545	1	9731	9731		36.447	2.5251	1	5373200	+		9075	19947	6365	6371	10421	10421					0.09359480110538243
FLRMWHLPWVQ	11	Unmodified	_FLRMWHLPWVQ_					0	0	0		ENST00000581856.5_1_18:28923397-28923595:-|nuORF	ENST00000581856.5_1_18:28923397-28923595:-|nuORF	ENST00000581856.5_1_18:28923397-28923595:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	505.2751770019531	3	504.935942	1511.786	0.40948	0.00020676	3.5396	0.0017873	3.9491	0.001994	504.9376797960629	56.544	0.77992	56.643	56.487	57.266	0.099186					51	34	2	0	0	0	0.75457	1	4770	4770		21.032	3.8655	1	733080			9076	14107	6366	6372	10422	10422					0.050573688786471394
FLRNCTGH	8	Unmodified	_FLRNCTGH_					0	0	0			REV__nc|ENSG00000006625|O75223-4|GGCT	REV__nc|ENSG00000006625|O75223-4|GGCT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.80535888671875	2	474.229436	946.44432	0.83635	0.00039662	-0.57894	-0.00027455	0.25741	0.00012207	474.2288225838281	18.858	0.42969	18.381	18.218	18.647	-0.47694					12	9	2	0	0	0	0.4196	1	471	471		25.45	0	1	91130	+		9077	29670	6367	6373	10423	10423					-0.031044790914279474
FLRRKVVNKFK	11	Unmodified	_FLRRKVVNKFK_					0	0	0		ENSG00000077063|ENST00000160373|CTTNBP2	ENSG00000077063|ENST00000160373|CTTNBP2	ENSG00000077063|ENST00000160373|CTTNBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97686767578125	3	478.973384	1433.89832	-0.90639	-0.00043414	3.3972	0.0016272	2.4909	0.0011931	479.3093505928146	47.758	1.3305	47.777	47.26	48.59	0.018967					62	39	2	0	0	0	0.80813	1	3631	3631		9.6461	0.43434	1	302610			9078	1371	6368	6374	10424	10424					0.19872965947138255
FLRRLLEYVKW	11	Unmodified	_FLRRLLEYVKW_					0	0	0		nc|ENSG00000104884|P18074-2|ERCC2;ENSG00000104884|ENST00000391945|ERCC2	nc|ENSG00000104884|P18074-2|ERCC2	nc|ENSG00000104884|P18074-2|ERCC2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.0044860839844	3	508.301278	1521.882	0.089419	4.5452E-05	2.9209	0.0014847	3.0103	0.0015301	508.30341986560745	15.666	0.15201	15.724	15.619	15.771	0.057872					6	3	2	0	0	0	0.17863	1	52	52		14.086	4.4399	1	40572			9079	2160	6369	6375	10425	10425					0.1419383999038928
FLRRLLEYVKW	11	Unmodified	_FLRRLLEYVKW_					0	0	0		nc|ENSG00000104884|P18074-2|ERCC2;ENSG00000104884|ENST00000391945|ERCC2	nc|ENSG00000104884|P18074-2|ERCC2	nc|ENSG00000104884|P18074-2|ERCC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	508.301278	1521.882	-0.52402	-0.00026636	3.3914	0.0017238	2.8674	0.0014575	508.30304731739506	15.563	0.10416	15.612	15.552	15.656	0.049079	-0.046117	0.00062898	NaN	14.086	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20716			9080	2160	6369	6375							0.1419383999038928
FLRRLLEYVKW	11	Unmodified	_FLRRLLEYVKW_					0	0	0		nc|ENSG00000104884|P18074-2|ERCC2;ENSG00000104884|ENST00000391945|ERCC2	nc|ENSG00000104884|P18074-2|ERCC2	nc|ENSG00000104884|P18074-2|ERCC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	508.301278	1521.882	0.79715	0.00040519	2.3135	0.0011759	3.1106	0.0015811	508.3024052037445	15.664	0.12666	15.64	15.524	15.651	-0.024207	-0.018833	-0.0010147	NaN	14.086	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57289			9081	2160	6369	6375							0.1419383999038928
FLRSPYFTY	9	Unmodified	_FLRSPYFTY_					0	0	0			REV__ENSG00000198768|ENST00000371149|APCDD1L	REV__ENSG00000198768|ENST00000371149|APCDD1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.753662109375	2	597.303124	1192.5917	-0.14777	-8.8265E-05	0.38225	0.00022832	0.23448	0.00014005	597.303183284022	73.609	0.60272	74.166	73.982	74.585	0.55755					21	15	2	0	0	0	0.20789	1	8327	8327		42.396	13.247	1	271560	+		9082	23378	6370	6376	10426	10426					0.0031031599437483237
FLRTLIKTCV	10	Unmodified	_FLRTLIKTCV_					0	0	0			REV__ENSG00000142961|ENST00000319928|MOB3C	REV__ENSG00000142961|ENST00000319928|MOB3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.3583374023438	2	597.357376	1192.7002	0.89294	0.00053341	0.40003	0.00023896	1.293	0.00077237	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.85694	1	10509	10509		21.96	2.8564	1	2674200	+		9083	19765	6371	6377	10427	10427					0.11155783973163125
FLRTPEILT	9	Unmodified	_FLRTPEILT_					0	0	0		ENSG00000120253|ENST00000340413|NUP43	ENSG00000120253|ENST00000340413|NUP43	ENSG00000120253|ENST00000340413|NUP43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3193969726562	2	545.318774	1088.623	-1.465	-0.00079892	-2.4047	-0.0013113	-3.8697	-0.0021102	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.7932	1	8533	8533		26.693	2.4902	1	4998200			9084	3118	6372	6378	10428	10428					0.08222889028456848
FLRVGHLV	8	Unmodified	_FLRVGHLV_					0	0	0		ENST00000585246.5_1_6:32123472-32133959:+|nuORF;nc|ENSG00000258388|Q9UMR5-2|PPT2;ENSG00000221988|ENST00000324816|PPT2;nc|ENSG00000258388|Q9UMR5-3|PPT2	ENST00000585246.5_1_6:32123472-32133959:+|nuORF	ENST00000585246.5_1_6:32123472-32133959:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.2237548828125	2	470.789987	939.565421	-1.6844	-0.00079299	1.2392	0.00058339	-0.44521	-0.0002096	470.790426130468	40.157	1.4729	40.525	39.471	40.943	0.36797					78	36	3	0	0	0	0.4196	1	3261	3261		39.021	13.571	1	1244300			9085	8692	6373	6379	10429	10429					0.09322091613569228
FLRVRLAPVP	10	Unmodified	_FLRVRLAPVP_					0	0	0		ENST00000217456.2_1_20:24973320-24973362:-|nuORF	ENST00000217456.2_1_20:24973320-24973362:-|nuORF	ENST00000217456.2_1_20:24973320-24973362:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.7425537109375	2	584.371675	1166.7288	-0.37454	-0.00021887	-0.45586	-0.00026639	-0.83039	-0.00048526	584.3711199396242	78.014	1.5459	78.577	77.448	78.994	0.56332					52	36	3	0	0	0	0.37624	1	8947	8947		37.159	1.5408	1	201610			9086	9151	6374	6380	10430	10430					0.15210269664612497
FLRVRLAPVP	10	Unmodified	_FLRVRLAPVP_					0	0	0		ENST00000217456.2_1_20:24973320-24973362:-|nuORF	ENST00000217456.2_1_20:24973320-24973362:-|nuORF	ENST00000217456.2_1_20:24973320-24973362:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	584.371675	1166.7288	-0.74261	-0.00043396	0.19607	0.00011458	-0.54654	-0.00031938	584.3715261129437	78.154	1.6211	78.559	77.388	79.009	0.4053	-0.0087881	0.00049367	NaN	37.159	57	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	226350			9087	9151	6374	6380							0.15210269664612497
FLRWILTAK	9	Unmodified	_FLRWILTAK_					0	0	0			REV__ENST00000487752.1_1_12:9821312-9833634:+|nuORF	REV__ENST00000487752.1_1_12:9821312-9833634:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3565673828125	2	574.352951	1146.69135	1.1072	0.0006359	3.9967	0.0022955	5.1039	0.0029314	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.78528	1	10727	10727		29.17	4.9673	1	708140	+		9088	16583	6375	6381	10431	10431					0.12387178398989818
FLRYTVALTLI	11	Unmodified	_FLRYTVALTLI_					0	0	0		ENSG00000174327|ENST00000308027|SLC16A13	ENSG00000174327|ENST00000308027|SLC16A13	ENSG00000174327|ENST00000308027|SLC16A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26788330078125	3	437.267463	1308.78056	-0.097307	-4.2549E-05	0.85982	0.00037597	0.76251	0.00033342	437.26771910027475	53.737	1.8842	53.732	52.971	54.855	-0.0053673					190	57	5	0	0	0	0.7896	1	4710	4710		13.508	0	1	2126600			9089	6925	6376	6382	10432	10432					0.1385196856786024
FLRYTVALTLI	11	Unmodified	_FLRYTVALTLI_					0	0	0		ENSG00000174327|ENST00000308027|SLC16A13	ENSG00000174327|ENST00000308027|SLC16A13	ENSG00000174327|ENST00000308027|SLC16A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2677001953125	3	437.267463	1308.78056	-0.7643	-0.0003342	1.6505	0.00072173	0.88624	0.00038752	437.2680989446087	50.458	1.6052	50.435	49.633	51.238	-0.02343					188	43	5	0	0	0	0.69071	1	4464	4464		33.039	3.4886	1	2919200			9090	6925	6376	6382	10433	10433					0.1385196856786024
FLSFPTTKT	9	Unmodified	_FLSFPTTKT_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.28271484375	2	521.2844	1040.55425	-0.1203	-6.2708E-05	0.1137	5.9271E-05	-0.0065946	-3.4377E-06	521.2843547400084	56.809	0.63957	57.206	56.898	57.537	0.39672					32	14	3	0	0	0	0.41984	1	5878	5878		56.434	3.0823	1	508430		+	9091	7934;579	6377	6383	10434	10434					0.035592247287468126
FLSFPTTKTY	10	Unmodified	_FLSFPTTKTY_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	602.81640625	2	602.816064	1203.61758	-1.6502	-0.00099475	1.7413	0.0010497	0.091122	5.493E-05	602.8169919372564	66.418	0.56296	66.446	66.215	66.778	0.02858					45	26	3	0	0	0	0.42808	1	6285	6285		77.318	24.381	1	172720		+	9092	7934;579	6378	6384	10435	10435					0.023911654459880083
FLSKLVYRVN	10	Unmodified	_FLSKLVYRVN_					0	0	0		ENSG00000111911|ENST00000229633|HINT3	ENSG00000111911|ENST00000229633|HINT3	ENSG00000111911|ENST00000229633|HINT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8690795898438	2	619.866423	1237.71829	0.62565	0.00038782	4.2643	0.0026433	4.8899	0.0030311	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.86587	1	10064	10064		29.17	0.020503	1	4779100			9093	2623	6379	6385	10436	10436					0.10894242219501393
FLSKLVYRVN	10	Unmodified	_FLSKLVYRVN_					0	0	0		ENSG00000111911|ENST00000229633|HINT3	ENSG00000111911|ENST00000229633|HINT3	ENSG00000111911|ENST00000229633|HINT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8696899414062	2	619.866423	1237.71829	0.87763	0.00054401	3.9959	0.0024769	4.8735	0.0030209	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.86471	1	9755	9755		30.318	2.4355	1	6574700			9094	2623	6379	6385	10437	10437					0.10894242219501393
FLSLCPSPQ	9	Unmodified	_FLSLCPSPQ_					0	0	0		ENST00000609274.5_2_19:15562735-15563116:-|nuORF;ENST00000602101.6_1_19:15562608-15563116:-|nuORF	ENST00000609274.5_2_19:15562735-15563116:-|nuORF	ENST00000609274.5_2_19:15562735-15563116:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.75347900390625	2	496.249503	990.484453	-0.98602	-0.00048931	2.6153	0.0012979	1.6293	0.00080854	496.25086498063314	27.531	0.8214	27.374	27.167	27.989	-0.15737					40	18	3	0	0	0	0.20789	1	1592	1592		74.255	28.303	1	300120			9095	14397	6380	6386	10438	10438					-0.011169772115067644
FLSLCPSPQ	9	Unmodified	_FLSLCPSPQ_					0	0	0		ENST00000609274.5_2_19:15562735-15563116:-|nuORF;ENST00000602101.6_1_19:15562608-15563116:-|nuORF	ENST00000609274.5_2_19:15562735-15563116:-|nuORF	ENST00000609274.5_2_19:15562735-15563116:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	496.249503	990.484453	-0.94687	-0.00046988	-4.4907	-0.0022285	-5.4376	-0.0026984	496.2470170646981	27.262	0.15555	27.235	27.112	27.267	-0.027706	-0.069565	-0.0056008	NaN	74.255	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9571.6			9096	14397	6380	6386							-0.011169772115067644
FLSLHRPL	8	Unmodified	_FLSLHRPL_					0	0	0			REV__ENST00000482902.5_1_X:153061851-153062064:+|nuORF	REV__ENST00000482902.5_1_X:153061851-153062064:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79547119140625	2	491.795269	981.575986	-0.12437	-6.1163E-05	0.93789	0.00046125	0.81352	0.00040009	491.7955803973609	45.417	1.3583	45.348	44.556	45.914	-0.06863					81	33	3	0	0	0	0.80706	1	3238	3238		19.36	1.0356	1	439300	+		9097	27008	6381	6387	10439	10439					0.08446074267976655
FLSRAVQKL	9	Unmodified	_FLSRAVQKL_					0	0	0			REV__ENSG00000140463|ENST00000268057|BBS4	REV__ENSG00000140463|ENST00000268057|BBS4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3179321289062	2	531.326934	1060.63931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.87	1	106.05	105.55	106.55	0.18647								0	0	0	0.28223	1	12951	12951		37.812	0	1		+		9098	19619	6382	6388	10440	10440					0.1114201498521652
FLSRGMTQLQ	10	Unmodified	_FLSRGMTQLQ_					0	0	0		nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF	nc|ENSG00000163359|P12111-4|COL6A3	nc|ENSG00000163359|P12111-4|COL6A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8088989257812	2	590.81079	1179.60703	0.42073	0.00024857	-3.3903	-0.002003	-2.9696	-0.0017545	590.8087931973557	57.669	1.7305	58.224	57.808	59.538	0.55513					104	42	3	0	0	0	0.20373	1	6108	6108		85.161	8.3867	1	12960000			9099	5787	6383	6389	10441	10441					0.02440859519924743
FLSVCQTLD	9	Unmodified	_FLSVCQTLD_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.8345947265625	2	513.252243	1024.48993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.639	1	75.684	75.184	76.184	0.045959								0	0	0	0.30778	1	7277	7277		27.882	1.1893	1		+		9100	15467	6384	6390	10442	10442					-0.021332984196760663
FLSVSSRAA	9	Unmodified	_FLSVSSRAA_					0	0	0		ENST00000470143.1_1_20:2633306-2634188:+|nuORF	ENST00000470143.1_1_20:2633306-2634188:+|nuORF	ENST00000470143.1_1_20:2633306-2634188:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	469.2590637207031	2	469.258717	936.50288	-0.21471	-0.00010075	0.56692	0.00026603	0.35221	0.00016528	469.258843652114	25.622	0.74992	25.589	25.307	26.057	-0.032125					48	23	3	0	0	0	0.78983	1	1026	1026		27.882	2.4321	1	142410			9101	12216	6385	6391	10443	10443					0.032089007547028814
FLTCISAHRY	10	Unmodified	_FLTCISAHRY_					0	0	0		ENSG00000169860|ENST00000305097|P2RY1	ENSG00000169860|ENST00000305097|P2RY1	ENSG00000169860|ENST00000305097|P2RY1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.8043212890625	2	605.805508	1209.59646	0.26797	0.00016234	-2.5366	-0.0015367	-2.2686	-0.0013743	605.8037042070808	56.302	1.0201	56.699	56.394	57.414	0.39672					62	25	4	0	0	0	0.64457	1	5811	5811		47.657	1.6851	1	2984400			9102	6532	6386	6392	10444	10444					4.876865477854153E-05
FLTKKFSRH	9	Unmodified	_FLTKKFSRH_					0	0	0		ENST00000540645.5_1_9:116823569-116838999:-|nuORF;ENSG00000106927|ENST00000265132|AMBP	ENST00000540645.5_1_9:116823569-116838999:-|nuORF	ENST00000540645.5_1_9:116823569-116838999:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3352661132812	2	582.337833	1162.66111	-0.30079	-0.00017516	-3.0653	-0.001785	-3.3661	-0.0019602	582.3359512116871	20.122	0.73913	19.652	19.35	20.089	-0.46967					42	15	4	0	0	0	0.55097	1	620	620		49.442	3.4896	1	789020			9103	2322	6387	6393	10445	10445					0.08628819733803539
FLTKQGAH	8	Unmodified	_FLTKQGAH_					0	0	0			REV__ENST00000378204.6_1_8:119123202-119123454:-|nuORF	REV__ENST00000378204.6_1_8:119123202-119123454:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2485046386719	2	451.248152	900.481751	-0.10221	-4.6121E-05	1.3002	0.00058673	1.198	0.00054061	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.83466	1	6482	6482		23.037	2.5549	1	178200	+		9104	25890	6388	6394	10446	10446					0.02752935445857929
FLTLGPGTHPP	11	Unmodified	_FLTLGPGTHPP_					0	0	0			REV__ENST00000451963.1_2_7:99818153-99818871:+|nuORF	REV__ENST00000451963.1_2_7:99818153-99818871:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8084716796875	2	568.808574	1135.60259	-1.0952	-0.00062293	0.022147	1.2597E-05	-1.073	-0.00061034	568.8088278319389	79.634	0.44958	79.733	79.466	79.915	0.098701					19	14	2	0	0	0	0.6921	1	7523	7523		32.812	0	1	93289	+		9105	23615	6389	6395	10447	10447					0.04021718368676375
FLTLRHKRP	9	Unmodified	_FLTLRHKRP_					0	0	0		nc|ENSG00000109618|Q9HD40-3|SEPSECS;ENSG00000109618|ENST00000382103|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	585.2959594726562	2	584.359099	1166.70365	-0.79671	-0.00046557	-3.8611	-0.0022562	-4.6578	-0.0027218	584.3567327411271	90.943	2.1663	91.012	89.428	91.595	0.069328					94	51	3	0	0	0	0.20789	1	9199	9199		26.693	7.5894	1	430090			9106	2470	6390	6396	10448	10448					0.1269621486203505
FLTLRHKRP	9	Unmodified	_FLTLRHKRP_					0	0	0		nc|ENSG00000109618|Q9HD40-3|SEPSECS;ENSG00000109618|ENST00000382103|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	584.359099	1166.70365	-0.45355	-0.00026503	-4.512	-0.0026366	-4.9655	-0.0029016	584.3563333774434	90.76	2.1174	90.76	89.515	91.633	0	0.028167	0.00065794	NaN	34.173	81	49	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	214450			9107	2470	6390	6396							0.1269621486203505
FLTLRHKRP	9	Unmodified	_FLTLRHKRP_					0	0	0		nc|ENSG00000109618|Q9HD40-3|SEPSECS;ENSG00000109618|ENST00000382103|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	584.359099	1166.70365	1.8894	0.0011041	-6.6862	-0.0039071	-4.7968	-0.002803	584.3550223895505	90.742	1.8846	90.673	89.309	91.194	-0.06913	-0.059013	-0.0018831	NaN	34.173	103	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	221630			9108	2470	6390	6396							0.1269621486203505
FLTLRHKRP	9	Unmodified	_FLTLRHKRP_					0	0	0		nc|ENSG00000109618|Q9HD40-3|SEPSECS;ENSG00000109618|ENST00000382103|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	584.359099	1166.70365	-0.068582	-4.0077E-05	-4.7526	-0.0027772	-4.8211	-0.0028173	584.3562326780389	90.627	1.8808	90.673	89.222	91.103	0.04644	-0.058566	0.00037674	NaN	34.173	96	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252140			9109	2470	6390	6396							0.1269621486203505
FLTLRHKRP	9	Unmodified	_FLTLRHKRP_					0	0	0		nc|ENSG00000109618|Q9HD40-3|SEPSECS;ENSG00000109618|ENST00000382103|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	584.359099	1166.70365	0.73181	0.00042764	-5.6041	-0.0032748	-4.8722	-0.0028471	584.3557174444478	90.428	1.8331	90.646	89.266	91.099	0.21737	-0.085816	-0.00061842	NaN	34.173	92	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	239240			9110	2470	6390	6396							0.1269621486203505
FLTLRHKRP	9	Unmodified	_FLTLRHKRP_					0	0	0		nc|ENSG00000109618|Q9HD40-3|SEPSECS;ENSG00000109618|ENST00000382103|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	584.359099	1166.70365	0.79126	0.00046238	-5.5903	-0.0032668	-4.7991	-0.0028044	584.3557068005473	90.433	1.9181	90.587	89.269	91.188	0.15388	-0.14429	-0.00060237	NaN	34.173	100	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	278850			9111	2470	6390	6396							0.1269621486203505
FLTLRHKRP	9	Unmodified	_FLTLRHKRP_					0	0	0		nc|ENSG00000109618|Q9HD40-3|SEPSECS;ENSG00000109618|ENST00000382103|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	584.359099	1166.70365	-1.3403	-0.0007832	-3.4967	-0.0020433	-4.8369	-0.0028265	584.3569637350566	90.312	1.8024	90.488	89.389	91.192	0.1758	-0.24398	0.0018445	NaN	34.173	87	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	257160			9112	2470	6390	6396							0.1269621486203505
FLTLRHKRP	9	Unmodified	_FLTLRHKRP_					0	0	0		nc|ENSG00000109618|Q9HD40-3|SEPSECS;ENSG00000109618|ENST00000382103|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	584.359099	1166.70365	0.25344	0.0001481	-5.7148	-0.0033395	-5.4613	-0.0031914	584.3556329834039	90.392	1.0551	90.842	90.451	91.506	0.45058	0.11058	-0.0007478	NaN	34.173	47	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	372440			9113	2470	6390	6396							0.1269621486203505
FLTLRHKRP	9	Unmodified	_FLTLRHKRP_					0	0	0		nc|ENSG00000109618|Q9HD40-3|SEPSECS;ENSG00000109618|ENST00000382103|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	nc|ENSG00000109618|Q9HD40-3|SEPSECS	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	584.359099	1166.70365	-1.588	-0.00092798	-4.0689	-0.0023777	-5.6569	-0.0033057	584.3568293198223	90.433	1.4998	90.904	90.485	91.985	0.47068	0.17244	0.0011757	NaN	34.173	79	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	311840			9114	2470	6390	6396							0.1269621486203505
FLTPAMPPSA	10	Unmodified	_FLTPAMPPSA_					0	0	0			REV__ENST00000482459.1_1_11:1756512-1769373:-|nuORF	REV__ENST00000482459.1_1_11:1756512-1769373:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.265153	1030.51575	-0.68261	-0.00035241	2.5135	0.0012976	1.8309	0.00094523	516.7695606934833	99.657	0.65626	99.657	99.348	100	0					26	15	2	0	0	0	0.37624	1	10114	10114		42.396	1.618	1	108840	+		9115	27466	6391	6397	10449	10449					0.0017159582259864692
FLTPLLRN	8	Unmodified	_FLTPLLRN_					0	0	0		ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.2923889160156	2	487.295102	972.575651	-0.085832	-4.1825E-05	-3.823	-0.0018629	-3.9088	-0.0019048	487.29311557745604	91.223	2.7335	91.293	90.723	93.457	0.069328					138	65	3	0	0	0	0.88601	1	9432	9432		34.173	1.3601	1	2116800			9116	8159	6392	6398	10450	10450					0.08826654548136048
FLTRQKKLQ	9	Unmodified	_FLTRQKKLQ_					0	0	0		ENST00000482885.1_1_3:159605445-159605709:+|nuORF;ENST00000472483.5_1_3:159557973-159605709:+|nuORF;ENSG00000151967|ENST00000445224|SCHIP1;nc|ENSG00000283154|P0DPB3-3|SCHIP1;nc|ENSG00000283154|P0DPB3-2|SCHIP1;ENSG00000283154|ENST00000638749|IQCJ-SCHIP1;nc|ENSG00000283154|B3KU38-2|IQCJ-SCHIP1;nc|ENSG00000283154|B3KU38|IQCJ-SCHIP1	ENST00000482885.1_1_3:159605445-159605709:+|nuORF	ENST00000482885.1_1_3:159605445-159605709:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	581.7388305664062	2	581.358765	1160.70298	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.894	1	67.894	67.394	68.394	0								0	0	0	0.31437	1	6014	6014		25.574	3.6142	1				9117	5152	6393	6399	10451	10451					0.12905375422315046
FLTWYLIS	8	Unmodified	_FLTWYLIS_					0	0	0			REV__nc|ENSG00000172954|Q6UWP7|LCLAT1	REV__nc|ENSG00000172954|Q6UWP7|LCLAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.7818603515625	2	521.784036	1041.55352	-0.50649	-0.00026428	-4.0027	-0.0020885	-4.5092	-0.0023528	521.7818171549486	48.167	1.0744	48.636	48.119	49.194	0.46941					72	26	4	0	0	0	0.84634	2	4609	4609;4643		60.294	0	1	7594000	+		9118	30034	6394	6400	10452;10453	10452					0.03440430079695034
FLVASTAWLI	10	Unmodified	_FLVASTAWLI_					0	0	0		ENST00000527204.5_2_11:62366051-62368578:-|nuORF;ENST00000278823.6_1_11:62366051-62368981:-|nuORF	ENST00000527204.5_2_11:62366051-62368578:-|nuORF	ENST00000527204.5_2_11:62366051-62368578:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8260498046875	2	560.823692	1119.63283	1.1549	0.0006477	3.0077	0.0016868	4.1626	0.0023345	560.825160852037	50.533	0.81666	51.284	51.001	51.818	0.75174					50	19	4	0	0	0	0.84112	1	4999	4999		37.159	5.6293	1	2961300			9119	9612	6395	6401	10454	10454					0.07780077033839916
FLVELVGGVV	10	Unmodified	_FLVELVGGVV_					0	0	0			REV__ENST00000256682.8_1_12:49330571-49330871:-|nuORF	REV__ENST00000256682.8_1_12:49330571-49330871:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3165893554688	2	516.310418	1030.60628	3.1012	0.0016012	3.8274	0.0019761	6.9286	0.0035773	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.85934	1	12964	12964		35.618	6.4687	1	1162600	+		9120	24330	6396	6402	10455	10455					0.09220388142512093
FLVKGEKKAS	10	Unmodified	_FLVKGEKKAS_					0	0	0			REV__ENSG00000150540|ENST00000280097|HNMT	REV__ENSG00000150540|ENST00000280097|HNMT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8296508789062	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.86471	1	9181	9181		30.318	3.5216	1	5219600	+		9121	20212	6397	6403	10456	10456					0.10094577919812764
FLVKVKLNYN	10	Unmodified	_FLVKVKLNYN_					0	0	0			REV__nc|ENSG00000115415|P42224-2|STAT1	REV__nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3731079101562	2	619.368798	1236.72304	3.0782	0.0019065	1.4411	0.00089258	4.5193	0.0027991	619.8710459081657	101.29	0.9677	101.61	101.32	102.29	0.32511					61	26	3	0	0	0	0.85939	1	12311	12311		23.042	0	1	2930100	+		9122	18117	6398	6404	10457	10457					0.11415126362271621
FLVLASSA	8	Unmodified	_FLVLASSA_					0	0	0		ENST00000355857.7_1_2:120124497-120125765:+|nuORF	ENST00000355857.7_1_2:120124497-120125765:+|nuORF	ENST00000355857.7_1_2:120124497-120125765:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.23272705078125	2	404.234179	806.453805	-1.2204	-0.00049332	-1.5408	-0.00062286	-2.7612	-0.0011162	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.87276	1	8086	8086		29.842	1.5873	1	2752600			9123	10357	6399	6405	10458	10458					0.04283612465758324
FLVLAVLNSGT	11	Unmodified	_FLVLAVLNSGT_					0	0	0		ENSG00000170989|ENST00000305352|S1PR1	ENSG00000170989|ENST00000305352|S1PR1	ENSG00000170989|ENST00000305352|S1PR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3299560546875	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.69995	1	10917	10917		31.53	2.3598	1	6007000			9124	6630	6400	6406	10459	10459					0.0881915819995811
FLVMSKCNN	9	Oxidation (M)	_FLVM(Oxidation (M))SKCNN_		FLVM(1)SKCNN		FLVM(64)SKCNN	0	0	1		ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF	ENSG00000157796|ENST00000399820|WDR19	ENSG00000157796|ENST00000399820|WDR19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.2536010742188	2	536.25172	1070.48889	-0.18867	-0.00010118	3.0557	0.0016386	2.867	0.0015374	536.2534618025845	79.483	1.8229	79.899	79.232	81.055	0.41621					80	42	3	0	0	0	0.30689	1	9125	9125		64.207	14.766	1	764650			9125	5449	6401	6407	10460	10460		95			-0.04353836060249705
FLVNSQQRW	9	Unmodified	_FLVNSQQRW_					0	0	0		ENSG00000151360|ENST00000252505|ALLC	ENSG00000151360|ENST00000252505|ALLC	ENSG00000151360|ENST00000252505|ALLC	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	588.8416137695312	2	589.309272	1176.60399	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.084	1	20.014	19.514	20.514	-0.070013								0	0	0	0.32159	1	483	483		23.042	0	1				9126	5110	6402	6408	10461	10461					0.022753524574227413
FLVPGNRHI	9	Unmodified	_FLVPGNRHI_					0	0	0			REV__ENST00000244040.3_1_20:56934856-56935048:+|nuORF	REV__ENST00000244040.3_1_20:56934856-56935048:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	527.3057861328125	2	526.803626	1051.5927	-0.10039	-5.2887E-05	2.2363	0.0011781	2.1359	0.0011252	526.807278834427	99.072	1.5943	99.295	98.744	100.34	0.22263					122	37	5	0	0	0	0.77546	1	10294	10294		31.955	1.4512	1	2555900	+		9127	24241	6403	6409	10462	10462					0.06896575153928097
FLVPGNRHI	9	Unmodified	_FLVPGNRHI_					0	0	0			REV__ENST00000244040.3_1_20:56934856-56935048:+|nuORF	REV__ENST00000244040.3_1_20:56934856-56935048:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	527.3057861328125	2	526.803626	1051.5927	-1.5276	-0.00080476	4.3964	0.002316	2.8688	0.0015113	526.8081287810614	99.219	1.531	99.405	98.808	100.34	0.18581					123	35	5	0	0	0	0.77546	1	10251	10251		31.955	1.4512	1	2548800	+		9128	24241	6403	6409	10463	10463					0.06896575153928097
FLVSSHRFFK	10	Unmodified	_FLVSSHRFFK_					0	0	0			REV__ENSG00000196653|ENST00000436624|ZNF502	REV__ENSG00000196653|ENST00000436624|ZNF502	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.8154907226562	2	634.35094	1266.68733	-0.40709	-0.00025824	-3.972	-0.0025197	-4.3791	-0.0027779	634.3471013625931	75.96	0.13737	75.96	75.914	76.051	0					6	4	2	0	0	0	0.37624	1	6903	6903		65.465	29.019	1	49169	+		9129	23157	6404	6410	10464	10464					0.06465088905247285
FLVVKNILSS	10	Unmodified	_FLVVKNILSS_					0	0	0			REV__ENST00000341307.6_1_11:63526292-63526517:+|nuORF	REV__ENST00000341307.6_1_11:63526292-63526517:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3400268554688	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.84816	1	12570	12570		17.468	0.99486	1	4071000	+		9130	25259	6405	6411	10465	10465					0.11535748579603933
FLWAPCLVL	9	Unmodified	_FLWAPCLVL_					0	0	0			REV__ENSG00000135914|ENST00000258400|HTR2B	REV__ENSG00000135914|ENST00000258400|HTR2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2759399414062	2	531.296256	1060.57796	0.69943	0.0003716	-2.2237	-0.0011815	-1.5243	-0.00080986	531.2949818252312	49.87	0.57771	50.715	50.436	51.014	0.84501					25	13	3	0	0	0	0.20789	1	4923	4923		60.404	14.452	1	629690	+		9131	19267	6406	6412	10466	10466					0.05009366961576234
FLWFFMRNYK	10	Unmodified	_FLWFFMRNYK_					0	0	0		ENST00000572567.5_1_16:14334355-14334679:+|nuORF	ENST00000572567.5_1_16:14334355-14334679:+|nuORF	ENST00000572567.5_1_16:14334355-14334679:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.5795593261719	3	484.581276	1450.722	0.72048	0.00034913	-3.069	-0.0014872	-2.3486	-0.0011381	484.579843854113	15.32	0.31642	15.296	15.169	15.485	-0.024207					27	11	4	0	0	0	0.85834	1	22	22		22.58	0.79923	1	171110			9132	14012	6407	6413	10467	10467					0.01466588721723383
FLWGRVYGVS	10	Unmodified	_FLWGRVYGVS_					0	0	0			REV__ENSG00000188340|ENST00000641131|OR6N2	REV__ENSG00000188340|ENST00000641131|OR6N2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	592.3181762695312	2	592.316566	1182.61858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.962	1	60.515	60.015	61.015	0.55323								0	0	0	0.45132	1	6359	6359		40.778	6.6056	1		+		9133	22997	6408	6414	10468	10468					0.034574246055626645
FLWKVSVITL	10	Unmodified	_FLWKVSVITL_					0	0	0		nc|ENSG00000054793|O75110-2|ATP9A;ENSG00000054793|ENST00000338821|ATP9A	nc|ENSG00000054793|O75110-2|ATP9A	nc|ENSG00000054793|O75110-2|ATP9A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.3709716796875	2	603.368267	1204.72198	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.26	1	107.41	106.91	107.91	0.14929								0	0	0	0.45132	1	13125	13125		20.947	1.8434	1				9134	1022	6409	6415	10469	10469					0.1278091199337723
FLWRKRDL	8	Unmodified	_FLWRKRDL_					0	0	0		ENSG00000198576|ENST00000356613|ARC	ENSG00000198576|ENST00000356613|ARC	ENSG00000198576|ENST00000356613|ARC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.329833984375	2	567.33255	1132.65055	-0.54401	-0.00030863	-3.815	-0.0021644	-4.359	-0.002473	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.8347	1	8667	8667		23.042	3.0457	1	4477200			9135	8290	6410	6416	10470	10470					0.08952837079368692
FLYLRCAV	8	Unmodified	_FLYLRCAV_					0	0	0			REV__ENSG00000156097|ENST00000527748|GPR61	REV__ENSG00000156097|ENST00000527748|GPR61	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.7657165527344	2	492.770406	983.526258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.52	1	72.652	72.152	73.152	0.13145								0	0	0	0.29199	1	6642	6642		29.842	4.2675	1		+		9136	20468	6411	6417	10471	10471					0.0338362326766628
FLYRCCYGRGL	11	Unmodified	_FLYRCCYGRGL_					0	0	0			REV__ENST00000597924.5_1_19:53345283-53349845:-|nuORF	REV__ENST00000597924.5_1_19:53345283-53349845:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.8851318359375	3	450.88637	1349.63728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.51	1	113.61	113.11	114.11	0.10217								0	0	0	0.56276	1	12176	12176		18.531	2.5243	1		+		9137	29274	6412	6418	10472	10472					-0.023551050865535217
FMDQSSIH	8	Oxidation (M)	_FM(Oxidation (M))DQSSIH_		FM(1)DQSSIH		FM(77)DQSSIH	0	0	1			REV__nc|ENSG00000230453|A2A2Z9|ANKRD18B	REV__nc|ENSG00000230453|A2A2Z9|ANKRD18B	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.7138671875	2	490.710742	979.406931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.919	1	99.282	98.782	99.782	0.36292								0	0	0	0.13582	1	11971	11971		76.847	30.895	1		+		9138	15934	6413	6419	10473	10473		228			-0.08359615147685417
FMFGVIGLVL	10	Unmodified	_FMFGVIGLVL_					0	0	0			REV__ENSG00000167080|ENST00000393354|B4GALNT2	REV__ENSG00000167080|ENST00000393354|B4GALNT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.6683349609375	2	548.317189	1094.61982	-0.16096	-8.8257E-05	-1.9956	-0.0010942	-2.1566	-0.0011825	548.3160687159891	17.224	0.27253	16.742	16.579	16.851	-0.48256					7	5	2	0	0	0	0.37624	1	241	241		3.6843	0	1	48303	+		9139	21350	6414	6420	10474	10474					0.07629922650085064
FMIAVFLPI	9	Unmodified	_FMIAVFLPI_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;ENST00000412573.1_1_7:89792322-89794045:+|nuORF	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.803955078125	2	525.806457	1049.59836	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.442	1	16.362	15.862	16.862	-0.080017								0	0	0	0.30219	1	117	117		29.842	1.9593	1				9140	5983	6415	6421	10475	10475					0.07554537621399504
FMILLTATSA	10	Unmodified	_FMILLTATSA_					0	0	0		ENST00000437681.1_1_1:28835797-28835884:+|nuORF	ENST00000437681.1_1_1:28835797-28835884:+|nuORF	ENST00000437681.1_1_1:28835797-28835884:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.29345703125	2	534.293911	1066.57327	-0.74259	-0.00039676	2.3108	0.0012346	1.5682	0.00083788	534.2951504671357	88.691	3.5877	88.691	87.598	91.185	0					140	83	2	0	0	0	0.84112	1	8632	8632		37.159	0.71236	1	382360			9141	11740	6416	6422	10476	10476					0.042644380281672056
FMILPTLAI	9	Unmodified	_FMILPTLAI_					0	0	0		nc|ENSG00000116704|Q9NTN3-2|SLC35D1;ENSG00000116704|ENST00000235345|SLC35D1	nc|ENSG00000116704|Q9NTN3-2|SLC35D1	nc|ENSG00000116704|Q9NTN3-2|SLC35D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8037414550781	2	509.803914	1017.59328	0.41341	0.00021076	0.014687	7.4873E-06	0.4281	0.00021825	509.80378130113013	99.26	1.5845	99.308	98.978	100.56	0.047523					71	36	3	0	0	0	0.76402	1	10651	10651		35.201	6.9464	1	477970			9142	2939	6417	6423	10477	10477					0.08518233758763927
FMKGTETQAVL	11	Unmodified	_FMKGTETQAVL_					0	0	0			REV__ENSG00000129158|ENST00000265965|SERGEF	REV__ENSG00000129158|ENST00000265965|SERGEF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.880615234375	3	408.88128	1223.62201	-2.1156	-0.00086504	-2.0603	-0.00084241	-4.1759	-0.0017075	408.8803002562497	23.885	1.1542	23.885	23.413	24.568	0					112	51	3	0	0	0	0.66009	1	830	830		37.508	16.476	1	176940	+		9143	18807	6418	6424	10478	10478					0.01914306597268478
FMPLSDVLY	9	Oxidation (M)	_FM(Oxidation (M))PLSDVLY_		FM(1)PLSDVLY		FM(60)PLSDVLY	0	0	1		nc|ENSG00000109743|Q10588-2|BST1;ENSG00000109743|ENST00000265016|BST1	nc|ENSG00000109743|Q10588-2|BST1	nc|ENSG00000109743|Q10588-2|BST1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.769287109375	2	550.770268	1099.52598	0.20093	0.00011067	2.8457	0.0015673	3.0466	0.001678	550.7716334502886	66.287	1.0768	66.252	66.005	67.082	-0.035217					118	49	3	0	0	0	0.3636	1	6418	6418		60.294	17.819	1	1422100			9144	2480	6419	6425	10479	10479		49			-0.019798412428372103
FMQEEHSLI	9	Unmodified	_FMQEEHSLI_					0	0	0			REV__nc|ENSG00000038427|P13611-5|VCAN	REV__nc|ENSG00000038427|P13611-5|VCAN	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.358642578125	2	567.268424	1132.5223	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.75	1	111.73	111.23	112.23	-0.019882								0	0	0	0.31088	1	11907	11907		26.796	8.4717	1		+		9145	16305	6420	6426	10480	10480					-0.038665110166903105
FMQLSLIYILL	11	Unmodified	_FMQLSLIYILL_					0	0	0		ENST00000430825.3_1_7:156461725-156469144:-|nuORF	ENST00000430825.3_1_7:156461725-156469144:-|nuORF	ENST00000430825.3_1_7:156461725-156469144:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9317932128906	3	451.933204	1352.77778	-1.2127	-0.00054806	0.00096912	4.3798E-07	-1.2117	-0.00054762	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.69931	1	10141	10141		31.634	11.604	1	518100			9146	11640	6421	6427	10481	10481					0.11550377118692268
FMTDRRPFL	9	Oxidation (M)	_FM(Oxidation (M))TDRRPFL_		FM(1)TDRRPFL		FM(66)TDRRPFL	0	0	1			REV__ENST00000394518.6_1_15:86290571-86290709:+|nuORF	REV__ENST00000394518.6_1_15:86290571-86290709:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	599.8029174804688	2	599.805508	1197.59646	-0.10584	-6.3483E-05	-3.4755	-0.0020846	-3.5813	-0.0021481	599.8032733987533	83.802	0.78403	84.257	83.937	84.721	0.45556					54	18	4	0	0	0	0.28163	1	9758	9758		66.429	13.493	1	762660	+		9147	26083	6422	6428	10482	10482		403			0.005568768654939049
FMVARLIG	8	Unmodified	_FMVARLIG_					0	0	0		nc|ENSG00000197506|Q9HAS3-2|SLC28A3;ENSG00000197506|ENST00000376238|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.7648620605469	2	453.765123	905.515694	-1.2902	-0.00058543	1.9617	0.00089015	0.67153	0.00030472	453.76607829009424	41.177	0.83587	41.181	40.825	41.661	0.0043983					78	27	4	0	0	0	0.85277	1	2729	2729		25.45	7.1258	1	657720			9148	8171	6423	6429	10483	10483					0.05915640613272899
FMVARLIG	8	Unmodified	_FMVARLIG_					0	0	0		nc|ENSG00000197506|Q9HAS3-2|SLC28A3;ENSG00000197506|ENST00000376238|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.76470947265625	2	453.765123	905.515694	0.21911	9.9423E-05	1.0227	0.00046406	1.2418	0.00056348	453.7653867501488	40.992	0.89008	41.065	40.735	41.626	0.073414					74	28	3	0	0	0	0.88915	1	2694	2694		35.201	0	1	782930			9149	8171	6423	6429	10484	10484					0.05915640613272899
FMVGVIIT	8	Unmodified	_FMVGVIIT_					0	0	0			REV__nc|ENSG00000184076|Q9UDW1-2|UQCR10	REV__nc|ENSG00000184076|Q9UDW1-2|UQCR10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.25531005859375	2	440.254057	878.493561	-1.055	-0.00046445	4.0449	0.0017808	2.99	0.0013163	440.255692333896	66.85	0.64691	66.903	66.553	67.2	0.052376					60	27	3	0	0	0	0.87276	1	5915	5915		29.842	6.7991	1	260280	+		9150	22643	6424	6430	10485	10485					0.049454161448238665
FNDPNAKEM	9	Oxidation (M)	_FNDPNAKEM(Oxidation (M))_		FNDPNAKEM(1)		FNDPNAKEM(80)	0	0	1		ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.2327270507812	2	541.234581	1080.45461	-0.89139	-0.00048245	0.68772	0.00037222	-0.20366	-0.00011023	541.2349300785645	27.362	0.52761	27.186	26.926	27.453	-0.17559					23	11	3	0	0	0	0.16822	1	1556	1556		80.455	22.225	1	289060			9151	1034	6425	6431	10486	10486		18			-0.08239960947503278
FNDPNAKEM	9	Oxidation (M)	_FNDPNAKEM(Oxidation (M))_		FNDPNAKEM(1)		FNDPNAKEM(100)	0	0	1		ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.2339477539062	2	541.234581	1080.45461	1.1266	0.00060974	-1.1433	-0.00061882	-0.016763	-9.0725E-06	541.2338707481769	27.375	0.59858	27.12	26.855	27.454	-0.25465					21	13	2	0	0	0	0.066118	2	1575	1575;1597		101.25	19.506	1	288150			9152	1034	6425	6431	10487;10488	10487		18			-0.08239960947503278
FNDPNAKEM	9	Oxidation (M)	_FNDPNAKEM(Oxidation (M))_					0	0	1		ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	541.234581	1080.45461	-0.024444	-1.323E-05	-1.3858	-0.00075004	-1.4102	-0.00076327	541.2325033353333	26.909	0.10326	26.976	26.922	27.025	0.066877	-0.11831	-0.00086737	NaN	101.25	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36458			9153	1034	6425	6431				18			-0.08239960947503278
FNDPNAKEM	9	Unmodified	_FNDPNAKEM_					0	0	0		ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.2374267578125	2	533.237124	1064.45969	0.79169	0.00042216	-0.04786	-2.5521E-05	0.74383	0.00039664	533.2369373230634	35.651	0.526	35.899	35.63	36.156	0.2477					31	13	3	0	0	0	0.035861	2	2752	2741;2752		114.86	37.541	1	1191100			9154	1034	6425	6432	10489;10490	10490					-0.06995657084894447
FNDPNAKEM	9	Unmodified	_FNDPNAKEM_					0	0	0		ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.2376708984375	2	533.237124	1064.45969	1.2605	0.00067214	-0.72445	-0.0003863	0.53604	0.00028584	533.2365828854781	35.612	0.4509	35.993	35.749	36.2	0.3812					29	11	3	0	0	0	0.0358	1	2758	2758		114.89	36.631	1	1583100			9155	1034	6425	6432	10491	10491					-0.06995657084894447
FNEKSNGIKSF	11	Unmodified	_FNEKSNGIKSF_					0	0	0			REV__ENST00000521036.5_1_8:97243285-97243480:-|nuORF	REV__ENST00000521036.5_1_8:97243285-97243480:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.3066711425781	3	424.21906	1269.63535	0.24987	0.000106	-1.3021	-0.00055236	-1.0522	-0.00044636	424.21846579835443	19.866	0.36864	19.236	19.075	19.443	-0.6296					10	7	2	0	0	0	0.17272	1	562	562		25.892	14.894	1	20545	+		9156	28113	6426	6433	10492	10492					0.011318807008365184
FNFVGKLL	8	Unmodified	_FNFVGKLL_					0	0	0		nc|ENSG00000131773|O75525-2|KHDRBS3;ENSG00000131773|ENST00000355849|KHDRBS3;ENSG00000112232|ENST00000281156|KHDRBS2	nc|ENSG00000131773|O75525-2|KHDRBS3	nc|ENSG00000131773|O75525-2|KHDRBS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	469.27947998046875	2	469.278921	936.543289	-1.2516	-0.00058737	1.4452	0.00067819	0.19353	9.0821E-05	469.27942412831663	72.527	0.82999	72.913	72.583	73.413	0.38581					51	19	4	0	0	0	0.15891	4	8089	8089;8101;8113;8127		110.34	0	1	1017900			9157	2642	6427	6434	10493;10494;10495;10496	10493					0.07247867145144937
FNFVGKLL	8	Unmodified	_FNFVGKLL_					0	0	0		nc|ENSG00000131773|O75525-2|KHDRBS3;ENSG00000131773|ENST00000355849|KHDRBS3;ENSG00000112232|ENST00000281156|KHDRBS2	nc|ENSG00000131773|O75525-2|KHDRBS3	nc|ENSG00000131773|O75525-2|KHDRBS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.2790832519531	2	469.278921	936.543289	-0.52895	-0.00024823	0.68197	0.00032003	0.15302	7.1809E-05	469.27908367393314	72.339	0.99197	72.889	72.565	73.557	0.55009					48	23	3	0	0	0	0.15891	4	8104	8104;8114;8126;8140		110.34	0	1	1292300			9158	2642	6427	6434	10497;10498;10499;10500	10497					0.07247867145144937
FNGLSLFPLL	10	Unmodified	_FNGLSLFPLL_					0	0	0			REV__ENST00000586749.1_1_19:649375-650400:-|nuORF	REV__ENST00000586749.1_1_19:649375-650400:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8250122070312	2	560.823692	1119.63283	1.1549	0.0006477	3.0077	0.0016868	4.1626	0.0023345	560.825160852037	50.533	0.81666	51.284	51.001	51.818	0.75174					50	19	4	0	0	0	0.8608	1	4988	4988		34.173	2.2177	1	2961300	+		9159	29113	6428	6435	10501	10501					0.07780077033839916
FNGRSQCYY	9	Carbamidomethyl (C)	_FNGRSQC(Carbamidomethyl (C))YY_	FNGRSQC(1)YY		FNGRSQC(59)YY		0	1	0		nc|ENSG00000125779|Q9BZ23-2|PANK2;nc|ENSG00000125779|Q9BZ23-3|PANK2;ENSG00000125779|ENST00000610179|PANK2;nc|ENSG00000125779|Q9BZ23|PANK2	nc|ENSG00000125779|Q9BZ23-2|PANK2	nc|ENSG00000125779|Q9BZ23-2|PANK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.2554931640625	2	597.753472	1193.49239	-0.1698	-0.0001015	2.479	0.0014818	2.3092	0.0013803	597.7548260397939	73.715	1.5956	74.274	74.024	75.62	0.55891					69	38	4	0	0	0	0.38563	1	8308	8308		58.782	12.81	1	1057500			9160	3414	6429	6436	10502	10502	45				-0.09661449962027291
FNGSEILHLCL	11	Unmodified	_FNGSEILHLCL_					0	0	0			REV__ENST00000515207.1_1_5:94872443-94877598:-|nuORF	REV__ENST00000515207.1_1_5:94872443-94877598:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	623.3138427734375	2	623.318448	1244.62234	1.0842	0.00067578	-3.9136	-0.0024394	-2.8295	-0.0017637	623.3158706081813	55.647	0.52406	56.216	55.908	56.432	0.56836					26	12	3	0	0	0	0.60058	1	5734	5734		44.377	0.26039	1	893050	+		9161	28028	6430	6437	10503	10503					0.009817263171271406
FNGSEILHLCL	11	Unmodified	_FNGSEILHLCL_					0	0	0			REV__ENST00000515207.1_1_5:94872443-94877598:-|nuORF	REV__ENST00000515207.1_1_5:94872443-94877598:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	623.318448	1244.62234	0.39576	0.00024668	-3.5695	-0.0022249	-3.1737	-0.0019782	623.3157005711116	55.846	0.64719	56.247	55.782	56.429	0.40101	0.015868	0.00032901	NaN	44.377	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	827170	+		9162	28028	6430	6437							0.009817263171271406
FNGSEILHLCL	11	Unmodified	_FNGSEILHLCL_					0	0	0			REV__ENST00000515207.1_1_5:94872443-94877598:-|nuORF	REV__ENST00000515207.1_1_5:94872443-94877598:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	623.318448	1244.62234	1.0842	0.00067578	-3.9136	-0.0024394	-2.8295	-0.0017637	623.3158706081813	55.647	0.52406	56.216	55.908	56.432	0.56836	-0.015868	-0.00010005	NaN	44.377	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	893050	+		9163	28028	6430	6437							0.009817263171271406
FNHKSLVDY	9	Unmodified	_FNHKSLVDY_					0	0	0		ENSG00000163380|ENST00000420581|LMOD3	ENSG00000163380|ENST00000420581|LMOD3	ENSG00000163380|ENST00000420581|LMOD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.7823486328125	2	561.782556	1121.55056	0.31807	0.00017869	-0.39941	-0.00022438	-0.081334	-4.5692E-05	561.7822462294486	46.807	0.63408	46.826	46.533	47.167	0.018967					36	16	3	0	0	0	0.62081	1	3484	3484		45.952	10.334	1	318170			9164	5791	6431	6438	10504	10504					-0.005354450451022785
FNIIIVKLFKK	11	Unmodified	_FNIIIVKLFKK_					0	0	0		ENST00000511985.1_1_4:157691583-157731994:-|nuORF	ENST00000511985.1_1_4:157691583-157731994:-|nuORF	ENST00000511985.1_1_4:157691583-157731994:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.9664306640625	3	454.967236	1361.87988	-1.2289	-0.00055911	0.35227	0.00016027	-0.87662	-0.00039883	454.9672058394649	41.291	1.22	41.25	40.922	42.142	-0.040806					93	31	4	0	0	0	0.85439	1	3083	3083		5.6988	0.28586	1	820870			9165	13028	6432	6439	10505	10505					0.21341411252569742
FNKEKLGL	8	Unmodified	_FNKEKLGL_					0	0	0		ENST00000472059.5_1_17:19558694-19578882:+|nuORF;ENST00000476965.5_1_17:19559657-19578882:+|nuORF;ENSG00000072210|ENST00000176643|ALDH3A2;nc|ENSG00000072210|P51648-2|ALDH3A2	ENST00000472059.5_1_17:19558694-19578882:+|nuORF	ENST00000472059.5_1_17:19558694-19578882:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.7786865234375	2	474.779285	947.544017	-1.7907	-0.00085019	1.4258	0.00067695	-0.36489	-0.00017324	474.779682532547	42.959	0.47445	42.959	42.724	43.198	0.00016785					19	10	2	0	0	0	0.88915	1	3276	3276		35.201	1.6851	1	81643			9166	1272	6433	6440	10506	10506					0.06814661794192034
FNKEKLGL	8	Unmodified	_FNKEKLGL_					0	0	0		ENST00000472059.5_1_17:19558694-19578882:+|nuORF;ENST00000476965.5_1_17:19559657-19578882:+|nuORF;ENSG00000072210|ENST00000176643|ALDH3A2;nc|ENSG00000072210|P51648-2|ALDH3A2	ENST00000472059.5_1_17:19558694-19578882:+|nuORF	ENST00000472059.5_1_17:19558694-19578882:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	474.779285	947.544017	0.27919	0.00013255	-0.80268	-0.00038109	-0.52349	-0.00024854	474.778627739279	43.034	0.59605	43.004	42.675	43.271	-0.029461	0.078399	-0.0013506	NaN	35.201	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60478			9167	1272	6433	6440							0.06814661794192034
FNKEKLGL	8	Unmodified	_FNKEKLGL_					0	0	0		ENST00000472059.5_1_17:19558694-19578882:+|nuORF;ENST00000476965.5_1_17:19559657-19578882:+|nuORF;ENSG00000072210|ENST00000176643|ALDH3A2;nc|ENSG00000072210|P51648-2|ALDH3A2	ENST00000472059.5_1_17:19558694-19578882:+|nuORF	ENST00000472059.5_1_17:19558694-19578882:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	474.779285	947.544017	-1.3363	-0.00063443	-0.084666	-4.0198E-05	-1.4209	-0.00067462	474.7791248821329	42.389	0.44186	42.823	42.605	43.047	0.4334	-0.10304	-0.00066881	NaN	35.201	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	511990			9168	1272	6433	6440							0.06814661794192034
FNKEKLGL	8	Unmodified	_FNKEKLGL_					0	0	0		ENST00000472059.5_1_17:19558694-19578882:+|nuORF;ENST00000476965.5_1_17:19559657-19578882:+|nuORF;ENSG00000072210|ENST00000176643|ALDH3A2;nc|ENSG00000072210|P51648-2|ALDH3A2	ENST00000472059.5_1_17:19558694-19578882:+|nuORF	ENST00000472059.5_1_17:19558694-19578882:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	474.779285	947.544017	-2.6817	-0.0012732	1.5513	0.00073652	-1.1305	-0.00053672	474.7798483898867	42.22	0.40042	42.917	42.731	43.132	0.69754	-0.0085052	0.00088463	NaN	35.201	24	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	503500			9169	1272	6433	6440							0.06814661794192034
FNKFSVIFKGP	11	Unmodified	_FNKFSVIFKGP_					0	0	0		ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.3635864257812	2	642.360973	1282.70739	0.94222	0.00060524	1.4845	0.00095361	2.4268	0.0015589	642.362532628932	110	1.3046	110.07	109.67	110.98	0.073685					156	47	4	0	0	0	0.61369	1	11826	11826		42.864	3.6114	1	7000400			9170	7859	6434	6441	10507	10507					0.07734839845238639
FNKKGPEFNAD	11	Unmodified	_FNKKGPEFNAD_					0	0	0			REV__nc|ENSG00000170242|Q96K76-2|USP47	REV__nc|ENSG00000170242|Q96K76-2|USP47	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.8095092773438	2	633.809302	1265.60405	-0.44859	-0.00028432	0.97715	0.00061933	0.52856	0.00033501	634.3107940188296	66.813	0.41111	66.777	66.556	66.967	-0.035698					25	16	2	0	0	0	0.48313	1	6402	6402		53.089	3.5529	1	91682	+		9171	21638	6435	6442	10508	10508					-0.01812692333214727
FNKNEESTL	9	Unmodified	_FNKNEESTL_					0	0	0			REV__ENSG00000121440|ENST00000263666|PDZRN3	REV__ENSG00000121440|ENST00000263666|PDZRN3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.8402099609375	2	541.261653	1080.50875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.311	1	75.399	74.899	75.899	0.087631								0	0	0	0.30778	1	6970	6970		27.882	1.1893	1		+		9172	18455	6436	6443	10509	10509					-0.028280455242793323
FNLLLRMYKL	10	Unmodified	_FNLLLRMYKL_					0	0	0		ENST00000261250.7_1_12:4598305-4598689:-|nuORF	ENST00000261250.7_1_12:4598305-4598689:-|nuORF	ENST00000261250.7_1_12:4598305-4598689:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.5935974121094	3	437.593293	1309.75805	-1.625	-0.00071111	2.6187	0.0011459	0.99363	0.0004348	437.5943775926199	17.133	0.5139	17.178	16.97	17.484	0.0457					57	22	4	0	0	0	0.85834	1	233	233		22.58	4.7465	1	252600			9173	9402	6437	6444	10510	10510					0.11556045898578304
FNLNSAPVVLH	11	Unmodified	_FNLNSAPVVLH_					0	0	0		ENSG00000164494|ENST00000369037|PDSS2	ENSG00000164494|ENST00000369037|PDSS2	ENSG00000164494|ENST00000369037|PDSS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.2256774902344	3	404.224146	1209.65061	1.4686	0.00059366	3.0682	0.0012402	4.5368	0.0018339	404.22529690964836	24.178	0.78393	23.665	23.451	24.235	-0.51365					26	17	2	0	0	0	0.72374	1	1155	1155		27.644	1.5805	1	138840			9174	5968	6438	6445	10511	10511					0.054167922887017994
FNNIFSIVP	9	Unmodified	_FNNIFSIVP_					0	0	0		nc|ENSG00000142583|P22732-2|SLC2A5;ENSG00000142583|ENST00000377424|SLC2A5	nc|ENSG00000142583|P22732-2|SLC2A5	nc|ENSG00000142583|P22732-2|SLC2A5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	525.7821655273438	2	525.784567	1049.55458	-1.0446	-0.00054924	-2.7067	-0.0014232	-3.7513	-0.0019724	525.7830438319411	71.34	0.76671	71.34	71.091	71.858	0					75	31	4	0	0	0	0.7932	1	6396	6396		26.693	1.1189	1	697060			9175	4571	6439	6446	10512	10512					0.031786444485987886
FNNWISKAIS	10	Unmodified	_FNNWISKAIS_					0	0	0		nc|ENSG00000165102|Q68CP4|HGSNAT;ENSG00000165102|ENST00000379644|HGSNAT	nc|ENSG00000165102|Q68CP4|HGSNAT	nc|ENSG00000165102|Q68CP4|HGSNAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.3104248046875	2	590.31148	1178.60841	-0.45325	-0.00026756	-2.7332	-0.0016135	-3.1865	-0.001881	590.309789757865	32.515	0.5012	32.526	32.269	32.77	0.010899					34	13	3	0	0	0	0.86218	1	1812	1812		32.812	1.1781	1	121810			9176	6045	6440	6447	10513	10513					0.026248168803249428
FNPASHPA	8	Unmodified	_FNPASHPA_					0	0	0		nc|ENSG00000185104|Q9UNN5-2|FAF1;ENSG00000185104|ENST00000396153|FAF1	nc|ENSG00000185104|Q9UNN5-2|FAF1	nc|ENSG00000185104|Q9UNN5-2|FAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.7032470703125	2	420.703577	839.392602	-0.13038	-5.4849E-05	0.77109	0.0003244	0.64072	0.00026955	420.70381677228994	36.025	0.72796	36.006	35.692	36.42	-0.018673					30	15	3	0	0	0	0.87922	1	2286	2286		31.955	3.7006	1	122880			9177	7680	6441	6448	10514	10514					-0.03351899513677381
FNQVPRPRFP	10	Unmodified	_FNQVPRPRFP_					0	0	0			REV__nc|ENSG00000051108|Q15011-3|HERPUD1	REV__nc|ENSG00000051108|Q15011-3|HERPUD1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.8985290527344	3	419.899885	1256.67783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.273	1	28.1	27.6	28.6	-0.17336								0	0	0	0.45132	1	1708	1708		27.047	0.98393	1		+		9178	16381	6442	6449	10515	10515					0.059753206197456166
FNQWIRGL	8	Unmodified	_FNQWIRGL_					0	0	0			REV__ENSG00000141564|ENST00000306801|RPTOR	REV__ENSG00000141564|ENST00000306801|RPTOR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.314697265625	2	517.282526	1032.5505	-0.74356	-0.00038463	2.4619	0.0012735	1.7183	0.00088884	517.2851901114678	39.416	0.64175	39.783	39.342	39.983	0.36797					20	14	2	0	0	0	0.4196	1	3295	3295		19.36	12.167	1	253890	+		9179	19697	6443	6450	10516	10516					0.03552599745557927
FNRKARQENLR	11	Unmodified	_FNRKARQENLR_					0	0	0		nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1;ENSG00000144426|ENST00000683969|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.80322265625	3	477.935769	1430.78548	-0.1294	-6.1845E-05	-1.3646	-0.00065219	-1.494	-0.00071404	478.2698011798485	44.146	0.27903	44.087	44	44.279	-0.058262					9	6	2	0	0	0	0.17784	1	3108	3108		28.577	12.047	1	53120			9180	4707	6444	6451	10517	10517					0.08731665483173856
FNRKARQENLR	11	Unmodified	_FNRKARQENLR_					0	0	0		nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1;ENSG00000144426|ENST00000683969|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	477.935769	1430.78548	-1.7426	-0.00083284	-0.77328	-0.00036958	-2.5159	-0.0012024	477.93534315546157	44.22	0.45278	44.218	44.047	44.5	-0.0024452	0.10977	-0.0007278	NaN	22.562	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71544			9181	4707	6444	6451							0.08731665483173856
FNRKARQENLR	11	Unmodified	_FNRKARQENLR_					0	0	0		nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1;ENSG00000144426|ENST00000683969|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	477.935769	1430.78548	-0.92862	-0.00044382	-0.78061	-0.00037308	-1.7092	-0.0008169	477.93528702411834	44.272	0.36928	44.281	44.009	44.378	0.0084534	0.17312	-0.00073831	NaN	22.562	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55440			9182	4707	6444	6451							0.08731665483173856
FNRKARQENLR	11	Unmodified	_FNRKARQENLR_					0	0	0		nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1;ENSG00000144426|ENST00000683969|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	477.935769	1430.78548	-2.7972	-0.0013369	1.346	0.00064331	-1.4511	-0.00069355	478.2707908052654	43.071	0.23984	43.845	43.667	43.907	0.7738	-0.26254	0.0023109	NaN	22.562	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178360			9183	4707	6444	6451							0.08731665483173856
FNSVYLLY	8	Unmodified	_FNSVYLLY_					0	0	0			REV__nc|ENSG00000164078|Q04912-2|MST1R	REV__nc|ENSG00000164078|Q04912-2|MST1R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.76312255859375	2	509.765843	1017.51713	-0.4431	-0.00022588	-4.2777	-0.0021806	-4.7208	-0.0024065	509.7635757668311	49.02	0.96839	49.02	48.705	49.674	0.00016785					42	21	3	0	0	0	0.90465	1	4126	4126		40.573	1.5511	1	450640	+		9184	21026	6445	6452	10518	10518					0.009075531829921601
FNTNVVLKK	9	Unmodified	_FNTNVVLKK_					0	0	0		ENSG00000204450|ENST00000533122|TRIM64	ENSG00000204450|ENST00000533122|TRIM64	ENSG00000204450|ENST00000533122|TRIM64	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8167114257812	2	531.818941	1061.62333	-0.033207	-1.766E-05	-3.353	-0.0017832	-3.3862	-0.0018009	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.67345	1	8665	8665		42.396	9.5837	1	1254600			9185	8444	6446	6453	10519	10519					0.09498308748334239
FNTQRRMA	8	Unmodified	_FNTQRRMA_					0	0	0		ENSG00000158169|ENST00000289081|FANCC	ENSG00000158169|ENST00000289081|FANCC	ENSG00000158169|ENST00000289081|FANCC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.2608032226562	2	512.261268	1022.50798	0.84106	0.00043084	-4.1492	-0.0021255	-3.3082	-0.0016946	512.2589866809528	29.67	0.55552	29.581	29.362	29.917	-0.089546					25	12	3	0	0	0	0.87479	1	1900	1900		30.504	2.6214	1	294960			9186	5466	6447	6454	10520	10520					-0.002371186543200565
FNTVRQSSKEP	11	Unmodified	_FNTVRQSSKEP_					0	0	0		nc|ENSG841|P62683|ERVK-21_gag	nc|ENSG841|P62683|ERVK-21_gag	nc|ENSG841|P62683|ERVK-21_gag	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	647.3037109375	2	646.833308	1291.65206	1.3469	0.00087119	1.8785	0.0012151	3.2254	0.0020863	647.336219493199	53.392	0.54261	54.007	53.778	54.321	0.61436					21	12	3	0	0	0	0.16892	1	5389	5389		50.034	17.283	1	312080			9187	15363	6448	6455	10521	10521					0.017903815868066886
FNTYRLTLQ	9	Unmodified	_FNTYRLTLQ_					0	0	0		nc|ENSG00000141519|Q4G0X9-3|CCDC40;ENST00000574799.5_1_17:78022329-78073571:+|nuORF;nc|ENSG00000141519|Q4G0X9-2|CCDC40;ENSG00000141519|ENST00000397545|CCDC40;ENST00000572253.5_1_17:78055330-78055681:+|nuORF	nc|ENSG00000141519|Q4G0X9-3|CCDC40	nc|ENSG00000141519|Q4G0X9-3|CCDC40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.3128662109375	2	578.31148	1154.60841	-0.28499	-0.00016481	0.39288	0.00022721	0.1079	6.2397E-05	578.3115305857085	56.498	0.8188	57.058	56.746	57.564	0.55954					58	18	5	0	0	0	0.44421	1	5865	5865		54.776	1.8396	1	1217800			9188	4508	6449	6456	10522	10522					0.03728816880334307
FNVGHPLL	8	Unmodified	_FNVGHPLL_					0	0	0			REV__nc|ENSG00000151468|Q9BQI4-2|CCDC3	REV__nc|ENSG00000151468|Q9BQI4-2|CCDC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3066711425781	2	448.75307	895.491587	0.84124	0.00037751	4.3259	0.0019413	5.1671	0.0023188	448.7557267996175	23.135	0.50262	22.561	22.375	22.878	-0.57415					17	12	2	0	0	0	0.4196	1	1041	1041		28.254	8.8943	1	21791	+		9189	20251	6450	6457	10523	10523					0.03966123451232306
FNVVLKHLG	9	Unmodified	_FNVVLKHLG_					0	0	0			REV__ENST00000469269.1_1_20:36758623-36761344:-|nuORF	REV__ENST00000469269.1_1_20:36758623-36761344:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8093872070312	2	513.808377	1025.6022	0.034734	1.7846E-05	1.2224	0.00062807	1.2571	0.00064592	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.7932	1	4444	4444		23.042	5.6775	1	666950	+		9190	23429	6451	6458	10524	10524					0.0904234343945518
FNYHYHEVMEE	11	Unmodified	_FNYHYHEVMEE_					0	0	0		nc|ENSG00000115866|P14868-2|DARS1;ENSG00000115866|ENST00000264161|DARS1	nc|ENSG00000115866|P14868-2|DARS1	nc|ENSG00000115866|P14868-2|DARS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.2464599609375	3	499.874965	1496.60306	-0.71629	-0.00035806	0.11831	5.9139E-05	-0.59799	-0.00029892	499.8748237051254	28.642	0.38671	28.622	28.443	28.83	-0.019407					13	9	2	0	0	0	0.18066	1	1412	1412		14.086	0	1	25326			9191	2877	6452	6459	10525	10525					-0.12537274764486028
FPAAPGPAAL	10	Unmodified	_FPAAPGPAAL_					0	0	0			REV__ENST00000574733.5_1_16:4519403-4524387:-|nuORF	REV__ENST00000574733.5_1_16:4519403-4524387:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.2524719238281	2	456.252903	910.491253	-1.6868	-0.0007696	1.5765	0.00071928	-0.1103	-5.0324E-05	456.2528624469303	52.407	1.3098	52.407	51.831	53.141	0					69	34	3	0	0	0	0.86786	1	4285	4285		26.796	0	1	84817	+		9192	28976	6453	6460	10526	10526					0.032427037313595974
FPAAPIPTL	9	Unmodified	_FPAAPIPTL_					0	0	0		nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;ENSG00000275066|ENST00000612223|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG	nc|ENSG00000275066|Q9UMZ2-4|SYNRG	nc|ENSG00000275066|Q9UMZ2-4|SYNRG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.25433349609375	2	463.770929	925.527304	-0.72313	-0.00033537	2.2492	0.0010431	1.526	0.00070772	463.77152658593445	84.686	0.67722	85.125	84.748	85.425	0.43967					32	16	3	0	0	0	0.20789	1	9869	9869		24.203	3.7209	1	222310			9193	9000	6454	6461	10527	10527					0.06156160908221864
FPAASTNLQK	10	Unmodified	_FPAASTNLQK_					0	0	0		nc|ENSG00000116698|Q92540-2|SMG7;nc|ENSG00000116698|Q92540|SMG7;nc|ENSG00000116698|Q92540-5|SMG7;nc|ENSG00000116698|Q92540-4|SMG7;ENSG00000116698|ENST00000688051|SMG7	nc|ENSG00000116698|Q92540-2|SMG7	nc|ENSG00000116698|Q92540-2|SMG7	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.7899780273438	2	538.790381	1075.56621	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.005	1	60.005	59.505	60.505	0.00051117								0	0	0	0.45132	1	5177	5177		35.618	2.8059	1				9194	2936	6455	6462	10528	10528					0.03144841471930704
FPADPWHFSL	10	Unmodified	_FPADPWHFSL_					0	0	0			REV__ENST00000531676.1_1_11:58910590-58910668:+|nuORF	REV__ENST00000531676.1_1_11:58910590-58910668:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.7901611328125	2	608.792924	1215.57129	-0.27962	-0.00017023	-3.8901	-0.0023683	-4.1697	-0.0025385	608.7904596405984	85.767	1.7592	86.215	85.742	87.502	0.44736					129	42	5	0	0	0	0.19278	1	10066	10066		87.754	0.057861	1	6047700	+		9195	28307	6456	6463	10529	10529					-0.027868546654417514
FPAEAQALTLR	11	Unmodified	_FPAEAQALTLR_					0	0	0			REV__ENST00000492979.2_1_7:76019335-76019617:-|nuORF	REV__ENST00000492979.2_1_7:76019335-76019617:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.8369750976562	2	608.837862	1215.66117	-0.14489	-8.8218E-05	-0.99259	-0.00060432	-1.1375	-0.00069254	608.8371154069557	110.53	1.2053	110.53	110.28	111.48	0					111	36	5	0	0	0	0.76699	1	11539	11539		18.262	0	1	1502000	+		9196	27682	6457	6464	10530	10530					0.06196774943123273
FPAEKESEW	9	Unmodified	_FPAEKESEW_					0	0	0		ENST00000539677.1_1_16:12874994-12897657:-|nuORF;nc|ENSG00000103381|Q9BRF8-3|CPPED1;nc|ENSG00000103381|Q9BRF8-2|CPPED1;ENSG00000103381|ENST00000381774|CPPED1	ENST00000539677.1_1_16:12874994-12897657:-|nuORF	ENST00000539677.1_1_16:12874994-12897657:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.7582397460938	2	561.758746	1121.50294	-0.44912	-0.0002523	0.1092	6.1344E-05	-0.33992	-0.00019095	561.7586502660547	47.898	1.9429	48.367	47.815	49.758	0.46941					115	48	3	0	0	0	0.057432	9	4658	4562;4574;4585;4598;4611;4621;4633;4646;4658		104.75	16.992	1	1598500			9197	2080	6458	6465	10531;10532;10533;10534;10535;10536;10537;10538;10539	10539					-0.052951440359720436
FPAEKESEW	9	Unmodified	_FPAEKESEW_					0	0	0		ENST00000539677.1_1_16:12874994-12897657:-|nuORF;nc|ENSG00000103381|Q9BRF8-3|CPPED1;nc|ENSG00000103381|Q9BRF8-2|CPPED1;ENSG00000103381|ENST00000381774|CPPED1	ENST00000539677.1_1_16:12874994-12897657:-|nuORF	ENST00000539677.1_1_16:12874994-12897657:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.758544921875	2	561.758746	1121.50294	-0.27813	-0.00015624	0.0086359	4.8513E-06	-0.26949	-0.00015139	561.7585959252343	47.679	1.8663	48.602	48.081	49.948	0.92315					113	46	3	0	0	0	0.051853	7	4607	4571;4582;4595;4607;4619;4637;4649		107.01	24.257	1	1533000			9198	2080	6458	6465	10540;10541;10542;10543;10544;10545;10546	10543					-0.052951440359720436
FPAGKVPAF	9	Unmodified	_FPAGKVPAF_					0	0	0		ENSG00000254772|ENST00000329251|EEF1G;nc|ENSG00000254772|P26641-2|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF	ENSG00000254772|ENST00000329251|EEF1G	ENSG00000254772|ENST00000329251|EEF1G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2624206542969	2	467.263271	932.511988	-0.81643	-0.00038149	0.89833	0.00041976	0.081902	3.827E-05	467.26354605492025	56.503	1.0235	56.9	56.676	57.699	0.39672					46	23	3	0	0	0	0.5393	1	5885	5885		50.025	3.2581	1	572640			9199	8880	6459	6466	10547	10547					0.043032941110254797
FPAGKVPAF	9	Unmodified	_FPAGKVPAF_					0	0	0		ENSG00000254772|ENST00000329251|EEF1G;nc|ENSG00000254772|P26641-2|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF	ENSG00000254772|ENST00000329251|EEF1G	ENSG00000254772|ENST00000329251|EEF1G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2626037597656	2	467.263271	932.511988	0.11358	5.3072E-05	-0.066689	-3.1161E-05	0.046891	2.191E-05	467.2630977802531	56.473	1.1167	57.033	56.572	57.688	0.55954					44	25	2	0	0	0	0.17071	3	5860	5860;5872;5883		79.939	5.4687	1	595300			9200	8880	6459	6466	10548;10549;10550	10548					0.043032941110254797
FPAGSVHVNVY	11	Unmodified	_FPAGSVHVNVY_					0	0	0		nc|ENSG00000153064|Q8NDB2-3|BANK1;nc|ENSG00000153064|Q8NDB2-2|BANK1;ENSG00000153064|ENST00000322953|BANK1;nc|ENSG00000153064|Q8NDB2-4|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	595.8033447265625	2	595.303655	1188.59276	-0.26168	-0.00015578	0.76497	0.00045539	0.5033	0.00029961	595.3039893124001	56.335	1.4276	56.732	56.028	57.456	0.39672					61	35	2	0	0	0	0.06978	5	5825	5800;5812;5825;5847;5861		98.582	52.63	1	1322500			9201	5212	6460	6467	10551;10552;10553;10554;10555	10553					0.006005303632719006
FPAGSVHVNVY	11	Unmodified	_FPAGSVHVNVY_					0	0	0		nc|ENSG00000153064|Q8NDB2-3|BANK1;nc|ENSG00000153064|Q8NDB2-2|BANK1;ENSG00000153064|ENST00000322953|BANK1;nc|ENSG00000153064|Q8NDB2-4|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	595.3025512695312	2	595.303655	1188.59276	0.34197	0.00020357	-0.2993	-0.00017817	0.042673	2.5403E-05	595.303540973118	56.187	1.0887	56.746	56.354	57.443	0.55954					63	26	3	0	0	0	0.0055183	5	5841	5806;5818;5829;5841;5853		112.41	50.666	1	1394000			9202	5212	6460	6467	10556;10557;10558;10559;10560	10559					0.006005303632719006
FPAHIFEPAVL	11	Unmodified	_FPAHIFEPAVL_					0	0	0		ENST00000496105.1_1_3:113169108-113212968:-|nuORF;ENSG00000163611|ENST00000295872|SPICE1	ENST00000496105.1_1_3:113169108-113212968:-|nuORF	ENST00000496105.1_1_3:113169108-113212968:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	620.8426513671875	2	620.839874	1239.66519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.955	1	67.089	66.589	67.589	0.13326								0	0	0	0.56276	1	5959	5959		21.96	1.9631	1				9203	5835	6461	6468	10561	10561					0.054948644368323585
FPALKQIVD	9	Unmodified	_FPALKQIVD_					0	0	0			REV__ENST00000470273.5_1_6:36981367-36981682:+|nuORF	REV__ENST00000470273.5_1_6:36981367-36981682:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8007202148438	2	515.800217	1029.58588	0.77846	0.00040153	-1.0889	-0.00056164	-0.31041	-0.00016011	515.7995603948896	54.612	0.91995	55.019	54.615	55.535	0.40663					52	21	3	0	0	0	0.12652	1	5556	5556		87.754	2.5935	1	1189300	+		9204	27086	6462	6469	10562	10562					0.07227217482704873
FPAPAKAVVY	10	Unmodified	_FPAPAKAVVY_					0	0	0		ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8025512695312	2	531.80276	1061.59097	0.63622	0.00033834	-3.693	-0.0019639	-3.0568	-0.0016256	531.8021231652395	53.434	1.6698	53.848	53.581	55.251	0.4139					51	39	2	0	0	0	0.43769	1	5402	5402		60.972	20.399	1	606530			9205	3770	6463	6470	10563	10563					0.06263521345317713
FPAPAKAVVY	10	Unmodified	_FPAPAKAVVY_					0	0	0		ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8025512695312	2	531.80276	1061.59097	-0.30181	-0.0001605	-0.24527	-0.00013044	-0.54708	-0.00029094	531.8026270627481	53.283	0.66404	53.897	53.572	54.236	0.61436					48	15	4	0	0	0	0.31414	2	5386	5386;5398		71.296	30.723	1	663700			9206	3770	6463	6470	10564;10565	10564					0.06263521345317713
FPAPGKTQFI	10	Unmodified	_FPAPGKTQFI_					0	0	0		ENST00000470336.5_1_3:100469341-100565327:-|nuORF	ENST00000470336.5_1_3:100469341-100565327:-|nuORF	ENST00000470336.5_1_3:100469341-100565327:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8297729492188	2	553.305667	1104.59678	0.75637	0.00041851	2.6881	0.0014873	3.4445	0.0019058	553.3078385094501	89.929	0.21506	90.081	89.915	90.13	0.1519					7	4	2	0	0	0	0.37624	1	8979	8979		32.812	3.6629	1	87506			9207	12218	6464	6471	10566	10566					0.04866619856966281
FPAPGKTVTL	10	Unmodified	_FPAPGKTVTL_					0	0	0		ENST00000473682.5_1_1:111738432-111738684:-|nuORF;nc|ENSG00000162777|Q9H6A0-2|DENND2D;ENSG00000162777|ENST00000357640|DENND2D	ENST00000473682.5_1_1:111738432-111738684:-|nuORF	ENST00000473682.5_1_1:111738432-111738684:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7999877929688	2	515.800217	1029.58588	0.77846	0.00040153	-1.0889	-0.00056164	-0.31041	-0.00016011	515.7995603948896	54.612	0.91995	55.019	54.615	55.535	0.40663					52	21	3	0	0	0	0.062066	4	5593	5546;5568;5579;5593		107.01	18.929	1	1189300			9208	5736	6465	6472	10567;10568;10569;10570	10570					0.07227217482704873
FPAPGKTVTL	10	Unmodified	_FPAPGKTVTL_					0	0	0		ENST00000473682.5_1_1:111738432-111738684:-|nuORF;nc|ENSG00000162777|Q9H6A0-2|DENND2D;ENSG00000162777|ENST00000357640|DENND2D	ENST00000473682.5_1_1:111738432-111738684:-|nuORF	ENST00000473682.5_1_1:111738432-111738684:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.800537109375	2	515.800217	1029.58588	-0.28373	-0.00014635	0.067226	3.4675E-05	-0.21651	-0.00011167	515.8000870732274	54.399	0.96269	54.984	54.585	55.548	0.58474					62	22	4	0	0	0	0.029561	4	5556	5536;5545;5556;5569		115.49	26.97	1	1350500			9209	5736	6465	6472	10571;10572;10573;10574	10573					0.07227217482704873
FPASFPNRQY	10	Unmodified	_FPASFPNRQY_					0	0	0		nc|ENSG00000101294|Q8TCT9-5|HM13;nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000492709.5_1_20:30126008-30136787:+|nuORF	nc|ENSG00000101294|Q8TCT9-5|HM13	nc|ENSG00000101294|Q8TCT9-5|HM13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	613.8013916015625	2	613.80128	1225.58801	0.6529	0.00040075	-0.18756	-0.00011513	0.46534	0.00028562	613.80114292673	53.57	1.1657	53.984	53.54	54.706	0.4139					69	27	3	0	0	0	0.21786	3	5413	5401;5413;5437		82.241	18.033	1	680700			9210	1925	6466	6473	10575;10576;10577	10576					-0.015763537794782678
FPASFPNRQY	10	Unmodified	_FPASFPNRQY_					0	0	0		nc|ENSG00000101294|Q8TCT9-5|HM13;nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000492709.5_1_20:30126008-30136787:+|nuORF	nc|ENSG00000101294|Q8TCT9-5|HM13	nc|ENSG00000101294|Q8TCT9-5|HM13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	613.8020629882812	2	613.80128	1225.58801	0.12191	7.4827E-05	0.84385	0.00051795	0.96575	0.00059278	613.8017514770659	53.316	1.1249	53.931	53.49	54.614	0.61436					65	26	4	0	0	0	0.14384	3	5401	5391;5401;5415		95.815	29.386	1	714770			9211	1925	6466	6473	10578;10579;10580	10579					-0.015763537794782678
FPASIIHF	8	Unmodified	_FPASIIHF_					0	0	0			REV__ENST00000324198.10_1_22:26123940-26124126:+|nuORF	REV__ENST00000324198.10_1_22:26123940-26124126:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2525939941406	2	466.255446	930.496338	-0.068934	-3.2141E-05	-2.7732	-0.001293	-2.8421	-0.0013252	466.25405568860674	62.979	1.1346	62.945	62.242	63.376	-0.033714					88	53	2	0	0	0	0.87807	1	5950	5950		31.579	4.7828	1	153380	+		9212	25041	6467	6474	10581	10581					0.028310075939884882
FPAVAGGPTP	10	Unmodified	_FPAVAGGPTP_					0	0	0		ENSG00000196589|ENST00000636986|MBD3L2B;ENSG00000237247|ENST00000329753|MBD3L5;ENSG00000230522|ENST00000381393|MBD3L2;ENSG00000205718|ENST00000381394|MBD3L4;ENSG00000182315|ENST00000333843|MBD3L3	ENSG00000196589|ENST00000636986|MBD3L2B	ENSG00000196589|ENST00000636986|MBD3L2B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26300048828125	2	457.242535	912.470518	-1.1657	-0.00053302	-2.7964	-0.0012786	-3.9621	-0.0018117	457.2405773995848	81.298	1.9803	81.443	80.351	82.331	0.14513					98	48	3	0	0	0	0.37624	1	7745	7745		23.042	0	1	187570			9213	7446	6468	6475	10582	10582					0.010781133517184571
FPAYPVSP	8	Unmodified	_FPAYPVSP_					0	0	0			REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.2242126464844	2	439.226354	876.438155	-0.33925	-0.00014901	-4.3133	-0.0018945	-4.6525	-0.0020435	439.22399398738395	28.101	0.67358	28.061	27.831	28.504	-0.039907					29	14	3	0	0	0	0.9159	1	1406	1406		44.531	10.359	1	53712	+		9214	17652	6469	6476	10583	10583					-0.005006740512953911
FPAYPVSP	8	Unmodified	_FPAYPVSP_					0	0	0			REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	439.226354	876.438155	0.34569	0.00015183	-5.8624	-0.0025749	-5.5167	-0.0024231	439.2236193233892	28.13	0.3908	28.166	27.898	28.288	0.036068	0.075797	-0.001494	NaN	44.531	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57173	+		9215	17652	6469	6476							-0.005006740512953911
FPAYPVSP	8	Unmodified	_FPAYPVSP_					0	0	0			REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	439.226354	876.438155	-0.33925	-0.00014901	-4.3133	-0.0018945	-4.6525	-0.0020435	439.22399398738395	28.101	0.67358	28.061	27.831	28.504	-0.039907	-0.028882	-0.00013313	NaN	44.531	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53712	+		9216	17652	6469	6476							-0.005006740512953911
FPAYPVSP	8	Unmodified	_FPAYPVSP_					0	0	0			REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	439.226354	876.438155	1.5856	0.00069643	-7.3738	-0.0032388	-5.7883	-0.0025424	439.2224047730178	28.233	0.6396	28.209	27.911	28.55	-0.023556	0.11918	-0.0028217	NaN	44.531	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60624	+		9217	17652	6469	6476							-0.005006740512953911
FPAYPVSP	8	Unmodified	_FPAYPVSP_					0	0	0			REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	439.226354	876.438155	0.32909	0.00014455	-3.8861	-0.0017069	-3.557	-0.0015623	439.2226942458992	27.896	0.094048	27.924	27.878	27.972	0.02817	-0.1661	0.00024207	NaN	44.531	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17665	+		9218	17652	6469	6476							-0.005006740512953911
FPCCCESERA	10	2 Carbamidomethyl (C)	_FPC(Carbamidomethyl (C))C(Carbamidomethyl (C))CESERA_	FPC(0.667)C(0.667)C(0.667)ESERA		FPC(0)C(0)C(0)ESERA		0	2	0		ENST00000479961.1_3_15:80181695-80215979:-|nuORF;ENST00000485386.1_1_15:80191454-80215979:-|nuORF	ENST00000479961.1_3_15:80181695-80215979:-|nuORF	ENST00000479961.1_3_15:80181695-80215979:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	629.7351684570312	2	629.736108	1257.45766	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.682	1	52.679	52.179	53.179	-0.0033035								0	0	0	0.45132	1	4569	4569		40.778	15.204	3				9219	12424	6470	6477	10584	10584	155;156;157				-0.1607677715662703
FPCGQPND	8	Unmodified	_FPCGQPND_					0	0	0		nc|ENSG00000169035|P49862-2|KLK7;ENSG00000169035|ENST00000595820|KLK7;ENST00000304045.6_1_19:51480794-51487328:-|nuORF	nc|ENSG00000169035|P49862-2|KLK7	nc|ENSG00000169035|P49862-2|KLK7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2398376464844	2	439.179078	876.343602	0.57334	0.0002518	2.6953	0.0011837	3.2686	0.0014355	439.1805517182107	55.571	0.57973	56.14	55.783	56.363	0.56836					19	13	3	0	0	0	0.4196	1	5744	5744		3.1592	0	1	357940			9220	6462	6471	6478	10585	10585					-0.09951555864938655
FPCPAFWD	8	Unmodified	_FPCPAFWD_					0	0	0		ENSG00000187720|ENST00000261862|THSD4;ENST00000567838.1_1_15:71952820-72059070:+|nuORF;nc|ENSG00000187720|Q6ZMP0-4|THSD4	ENSG00000187720|ENST00000261862|THSD4	ENSG00000187720|ENST00000261862|THSD4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.7138671875	2	491.710014	981.405474	1.4902	0.00073275	0.68981	0.00033919	2.18	0.0010719	491.7099457102369	98.9	0.62425	99.265	98.977	99.601	0.36552					24	15	2	0	0	0	0.4196	1	11971	11971		14.664	0	1	330430			9221	7875	6472	6479	10586	10586					-0.08597204445800344
FPCSECRESF	10	Unmodified	_FPCSECRESF_					0	0	0		nc|ENSG00000099326|P28698-2|MZF1;ENST00000600004.1_1_19:59073441-59074896:-|nuORF;ENSG00000099326|ENST00000215057|MZF1	nc|ENSG00000099326|P28698-2|MZF1	nc|ENSG00000099326|P28698-2|MZF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	602.7417602539062	2	602.741716	1203.46888	-0.44083	-0.0002657	0.73487	0.00044294	0.29405	0.00017723	602.7420137971703	85.061	0.92115	85.061	84.569	85.49	0					45	20	3	0	0	0	0.71042	1	8035	8035		44.117	1.7207	1	292590			9222	1755	6473	6480	10587	10587					-0.1247163179089057
FPCYQANEN	9	Unmodified	_FPCYQANEN_					0	0	0			REV__nc|ENSG00000162688|P35573-2|AGL	REV__nc|ENSG00000162688|P35573-2|AGL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.2235107421875	2	543.221474	1084.42839	0.87077	0.00047302	2.9598	0.0016078	3.8306	0.0020808	543.2230181375598	26.111	0.63519	26.078	25.721	26.356	-0.032125					28	17	2	0	0	0	0.55097	1	1070	1070		49.442	3.4693	1	51385	+		9223	20835	6474	6481	10588	10588					-0.11044230118977794
FPCYQANEN	9	Unmodified	_FPCYQANEN_					0	0	0			REV__nc|ENSG00000162688|P35573-2|AGL	REV__nc|ENSG00000162688|P35573-2|AGL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	543.221474	1084.42839	0.39323	0.00021361	3.6073	0.0019596	4.0006	0.0021732	543.223279538055	25.648	0.46862	25.695	25.464	25.932	0.047163	-0.23074	0.00037222	NaN	49.442	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42267	+		9224	20835	6474	6481							-0.11044230118977794
FPCYQANEN	9	Unmodified	_FPCYQANEN_					0	0	0			REV__nc|ENSG00000162688|P35573-2|AGL	REV__nc|ENSG00000162688|P35573-2|AGL	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	543.221474	1084.42839	0.87077	0.00047302	2.9598	0.0016078	3.8306	0.0020808	543.2230181375598	26.111	0.63519	26.078	25.721	26.356	-0.032125	0.15292	-0.00033129	NaN	49.442	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51385	+		9225	20835	6474	6481							-0.11044230118977794
FPDICEDRS	9	Unmodified	_FPDICEDRS_					0	0	0			REV__nc|ENSG00000060069|Q9Y5B0-4|CTDP1	REV__nc|ENSG00000060069|Q9Y5B0-4|CTDP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.234130859375	2	541.234581	1080.45461	-0.89139	-0.00048245	0.68772	0.00037222	-0.20366	-0.00011023	541.2349300785645	27.362	0.52761	27.186	26.926	27.453	-0.17559					23	11	3	0	0	0	0.24527	1	1565	1565		69.628	9.5094	1	289060	+		9226	16447	6475	6482	10589	10589					-0.08239960947503278
FPDKPITQY	9	Unmodified	_FPDKPITQY_					0	0	0		nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST	nc|ENSG00000244038|P39656-2|DDOST	nc|ENSG00000244038|P39656-2|DDOST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.7880859375	2	554.787307	1107.56006	-0.090249	-5.0069E-05	-0.15003	-8.3237E-05	-0.24028	-0.00013331	554.7871061009962	51.255	2.1946	51.69	51.036	53.231	0.43505					155	52	4	0	0	0	0.030919	13	5106	5070;5082;5095;5106;5117;5129;5142;5154;5166;5178;5190;5203;5222		117.81	46.515	1	2886400			9227	8818	6476	6483	10590;10591;10592;10593;10594;10595;10596;10597;10598;10599;10600;10601;10602	10593					0.010583232404314913
FPDKPITQY	9	Unmodified	_FPDKPITQY_					0	0	0		nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST	nc|ENSG00000244038|P39656-2|DDOST	nc|ENSG00000244038|P39656-2|DDOST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7882080078125	2	554.787307	1107.56006	0.66113	0.00036678	-0.90276	-0.00050084	-0.24164	-0.00013406	554.7867054478468	51.121	2.0515	51.873	51.202	53.253	0.75174					120	49	3	0	0	0	0.026116	9	5101	5059;5079;5091;5101;5113;5126;5137;5149;5161		120.87	56.661	1	3213200			9228	8818	6476	6483	10603;10604;10605;10606;10607;10608;10609;10610;10611	10606					0.010583232404314913
FPDKVALLQ	9	Unmodified	_FPDKVALLQ_					0	0	0		ENST00000467061.1_1_3:185212881-185213145:-|nuORF;ENST00000475480.5_1_3:185199046-185216749:-|nuORF;ENSG00000163900|ENST00000421852|TMEM41A	ENST00000467061.1_1_3:185212881-185213145:-|nuORF	ENST00000467061.1_1_3:185212881-185213145:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.7987670898438	2	515.800217	1029.58588	-0.0063158	-3.2577E-06	-3.7892	-0.0019544	-3.7955	-0.0019577	515.7979776623419	22.5	0.57006	22.441	22.217	22.787	-0.058668					43	21	3	0	0	0	0.71772	1	719	719		39.253	3.6345	1	61606			9229	5879	6477	6484	10612	10612					0.07227217482704873
FPDLRRFLFQR	11	Unmodified	_FPDLRRFLFQR_					0	0	0			REV__nc|ENSG00000042781|O75445-3|USH2A	REV__nc|ENSG00000042781|O75445-3|USH2A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.9491882324219	3	498.949127	1493.82555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.939	1	51.374	50.874	51.874	0.43505								0	0	0	0.56276	1	5036	5036		17.167	1.2461	1		+		9230	16330	6478	6485	10613	10613					0.09839212153724475
FPDQPVGL	8	Unmodified	_FPDQPVGL_					0	0	0		ENST00000538502.5_2_1:109867546-109867600:-|nuORF	ENST00000538502.5_2_1:109867546-109867600:-|nuORF	ENST00000538502.5_2_1:109867546-109867600:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2679443359375	2	436.729261	871.443968	-0.50142	-0.00021899	0.14039	6.1313E-05	-0.36103	-0.00015767	436.7291945550942	50.993	0.19941	50.903	50.763	50.962	-0.089958					11	6	2	0	0	0	0.4196	1	4032	4032		25.45	13.243	1	73354			9231	13466	6479	6486	10614	10614					0.0031042446039464267
FPDRNVAL	8	Unmodified	_FPDRNVAL_					0	0	0		nc|ENSG00000148384|Q9NRR6-2|INPP5E;ENSG00000148384|ENST00000371712|INPP5E	nc|ENSG00000148384|Q9NRR6-2|INPP5E	nc|ENSG00000148384|Q9NRR6-2|INPP5E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.25286865234375	2	466.253434	930.492316	-0.068934	-3.2141E-05	1.5407	0.00071835	1.4718	0.00068621	466.25405568860674	62.979	1.1346	62.945	62.242	63.376	-0.033714					88	53	2	0	0	0	0.89962	1	5967	5967		38.806	1.647	1	153380			9232	4958	6480	6487	10615	10615					0.024289181002814075
FPDTRWCS	8	Unmodified	_FPDTRWCS_					0	0	0			REV__nc|ENSG00000179869|Q86UQ4|ABCA13	REV__nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.2200622558594	2	506.221277	1010.428	-0.16522	-8.3636E-05	-3.8443	-0.0019461	-4.0095	-0.0020297	506.2193086003883	21.077	0.5027	21.012	20.762	21.265	-0.064743					30	20	2	0	0	0	0.86791	1	587	587		28.254	2.6802	1	45800	+		9233	22360	6481	6488	10616	10616					-0.07679605048178928
FPEELTQTF	9	Unmodified	_FPEELTQTF_					0	0	0		ENSG00000254772|ENST00000329251|EEF1G;nc|ENSG00000254772|P26641-2|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF	ENSG00000254772|ENST00000329251|EEF1G	ENSG00000254772|ENST00000329251|EEF1G	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.3232421875	2	556.268947	1110.52334	0.11137	6.1952E-05	-1.8264	-0.001016	-1.715	-0.00095401	556.2690469003566	78.665	1.5256	79.075	78.551	80.077	0.4106					91	35	4	0	0	0	0.20789	1	8955	8955		30.318	0	1	582630			9234	8880	6482	6489	10617	10617					-0.027499733761487732
FPEELTQTF	9	Unmodified	_FPEELTQTF_					0	0	0		ENSG00000254772|ENST00000329251|EEF1G;nc|ENSG00000254772|P26641-2|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF	ENSG00000254772|ENST00000329251|EEF1G	ENSG00000254772|ENST00000329251|EEF1G	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.3238525390625	2	556.268947	1110.52334	-0.14936	-8.3082E-05	-2.0747	-0.0011541	-2.2241	-0.0012372	556.2692409173901	78.528	1.4375	79.091	78.618	80.056	0.56332					89	33	5	0	0	0	0.20789	1	8969	8969		49.442	17.487	1	581800			9235	8880	6482	6489	10618	10618					-0.027499733761487732
FPEHIFPAL	9	Unmodified	_FPEHIFPAL_					0	0	0		ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	ENSG00000138071|ENST00000260641|ACTR2	ENSG00000138071|ENST00000260641|ACTR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.786865234375	2	535.78711	1069.55967	0.13474	7.2191E-05	-0.065845	-3.5279E-05	0.068893	3.6912E-05	535.7869150542037	77.548	2.4284	77.954	77.388	79.816	0.40531					160	57	4	0	0	0	0.043636	11	8828	8782;8794;8805;8816;8828;8840;8853;8865;8877;8889;8914		110.34	49.365	1	5446200			9236	4262	6483	6490	10619;10620;10621;10622;10623;10624;10625;10626;10627;10628;10629	10623					0.027669483112276794
FPEHIFPAL	9	Unmodified	_FPEHIFPAL_					0	0	0		ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	ENSG00000138071|ENST00000260641|ACTR2	ENSG00000138071|ENST00000260641|ACTR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7869873046875	2	535.78711	1069.55967	-0.42023	-0.00022515	0.39284	0.00021048	-0.027388	-1.4674E-05	535.7871838143834	77.456	2.5646	78.024	77.453	80.018	0.56836					165	60	5	0	0	0	0.043636	13	8824	8791;8801;8813;8824;8836;8848;8860;8872;8884;8897;8921;8934;8946		110.34	40.71	1	5869200			9237	4262	6483	6490	10630;10631;10632;10633;10634;10635;10636;10637;10638;10639;10640;10641;10642	10633					0.027669483112276794
FPEIHVAQY	9	Unmodified	_FPEIHVAQY_					0	0	0		ENSG00000100603|ENST00000261531|SNW1;ENST00000557663.1_1_14:78205086-78227470:-|nuORF	ENSG00000100603|ENST00000261531|SNW1	ENSG00000100603|ENST00000261531|SNW1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.279296875	2	552.279649	1102.54475	-1.2435	-0.00068676	0.75214	0.00041539	-0.49136	-0.00027137	552.2801437174752	62.246	1.5344	62.635	61.911	63.446	0.38846					64	34	4	0	0	0	0.30689	1	6666	6666		64.207	18.235	1	395470			9238	1855	6484	6491	10643	10643					-0.0024254355676021078
FPEIHVAQY	9	Unmodified	_FPEIHVAQY_					0	0	0		ENSG00000100603|ENST00000261531|SNW1;ENST00000557663.1_1_14:78205086-78227470:-|nuORF	ENSG00000100603|ENST00000261531|SNW1	ENSG00000100603|ENST00000261531|SNW1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.281005859375	2	552.279649	1102.54475	-0.16905	-9.3361E-05	-0.58497	-0.00032307	-0.75402	-0.00041643	552.2796277064115	62.048	1.5827	62.603	61.972	63.555	0.5545					62	36	3	0	0	0	0.41566	1	6659	6659		56.721	0.28726	1	390940			9239	1855	6484	6491	10644	10644					-0.0024254355676021078
FPFAANSRAK	10	Unmodified	_FPFAANSRAK_					0	0	0		nc|ENSG00000091140|P09622-2|DLD;ENSG00000091140|ENST00000205402|DLD;nc|ENSG00000091140|P09622-3|DLD	nc|ENSG00000091140|P09622-2|DLD	nc|ENSG00000091140|P09622-2|DLD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.79638671875	2	554.79854	1107.58253	-0.23484	-0.00013029	-3.1917	-0.0017707	-3.4265	-0.001901	554.796558209616	26.745	0.66422	26.786	26.47	27.134	0.040833					48	20	4	0	0	0	0.86348	1	1171	1171		31.53	2.3598	1	214690			9240	1671	6485	6492	10645	10645					0.03303967428678334
FPFEKGSVQY	10	Unmodified	_FPFEKGSVQY_					0	0	0		ENSG00000124795|ENST00000652689|DEK;nc|ENSG00000124795|P35659-2|DEK	ENSG00000124795|ENST00000652689|DEK	ENSG00000124795|ENST00000652689|DEK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	601.2985229492188	2	601.298039	1200.58152	-0.44181	-0.00026566	0.72714	0.00043723	0.28533	0.00017157	601.2982963170796	58.097	1.2686	58.491	57.967	59.236	0.39407					85	30	4	0	0	0	0.0085745	7	6073	6041;6051;6062;6073;6085;6099;6110		132.76	53.045	1	1867200			9241	3363	6486	6493	10646;10647;10648;10649;10650;10651;10652	10649					-0.010742917308562028
FPFEKGSVQY	10	Unmodified	_FPFEKGSVQY_					0	0	0		ENSG00000124795|ENST00000652689|DEK;nc|ENSG00000124795|P35659-2|DEK	ENSG00000124795|ENST00000652689|DEK	ENSG00000124795|ENST00000652689|DEK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	601.2982788085938	2	601.298039	1200.58152	0.18478	0.00011111	-0.04934	-2.9668E-05	0.13544	8.1442E-05	601.2978714017909	58.001	1.2183	58.554	58.039	59.257	0.55323					86	29	4	0	0	0	0.18075	6	6091	6044;6056;6067;6078;6091;6122		90.601	23.107	1	1809800			9242	3363	6486	6493	10653;10654;10655;10656;10657;10658	10657					-0.010742917308562028
FPFKAIIYQ	9	Unmodified	_FPFKAIIYQ_					0	0	0			REV__ENSG00000183770|ENST00000648323|FOXL2	REV__ENSG00000183770|ENST00000648323|FOXL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	563.816650390625	2	563.81841	1125.62227	-0.18452	-0.00010404	-2.2508	-0.001269	-2.4353	-0.0013731	563.8170656553208	53.579	0.9713	53.517	53.086	54.057	-0.062061					40	24	2	0	0	0	0.7932	1	4408	4408		24.203	1.1603	1	183800	+		9243	22625	6487	6494	10659	10659					0.06448094379402391
FPFLPILVM	9	Unmodified	_FPFLPILVM_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8117065429688	2	538.814282	1075.61401	-0.51241	-0.00027609	-3.7898	-0.002042	-4.3022	-0.0023181	538.8121403437532	71.683	0.65767	72.233	71.99	72.647	0.55009					25	15	2	0	0	0	0.55559	1	8021	8021		49.211	9.958	1	221860			9244	15200	6488	6495	10660	10660					0.07922824138449869
FPFLPILVM	9	Unmodified	_FPFLPILVM_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	538.814282	1075.61401	-0.17188	-9.2609E-05	-5.7823	-0.0031156	-5.9542	-0.0032082	539.3110662904727	72.178	0.23453	72.215	72.101	72.335	0.037148	-0.015338	-0.00039883	NaN	49.211	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27538			9245	15200	6488	6495							0.07922824138449869
FPFRPRPVQNF	11	Unmodified	_FPFRPRPVQNF_					0	0	0		nc|ENSG00000051108|Q15011-4|HERPUD1;nc|ENSG00000051108|Q15011-2|HERPUD1;ENSG00000051108|ENST00000439977|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1	nc|ENSG00000051108|Q15011-4|HERPUD1	nc|ENSG00000051108|Q15011-4|HERPUD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.921875	3	468.922689	1403.74624	0.27111	0.00012713	-0.26072	-0.00012226	0.010391	4.8728E-06	468.9224086038503	54.308	0.88259	54.714	54.361	55.244	0.40663					53	20	4	0	0	0	0.59499	1	5537	5537		45.022	8.7046	1	1397500			9246	997	6489	6496	10661	10661					0.060515651996183806
FPFRPRPVQNF	11	Unmodified	_FPFRPRPVQNF_					0	0	0		nc|ENSG00000051108|Q15011-4|HERPUD1;nc|ENSG00000051108|Q15011-2|HERPUD1;ENSG00000051108|ENST00000439977|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1	nc|ENSG00000051108|Q15011-4|HERPUD1	nc|ENSG00000051108|Q15011-4|HERPUD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.92218017578125	3	468.922689	1403.74624	-0.88928	-0.000417	0.75917	0.00035599	-0.13011	-6.1011E-05	468.9229036984858	54.158	0.75184	54.743	54.376	55.127	0.58474					50	17	4	0	0	0	0.57736	2	5515	5515;5527		46.457	5.1066	1	1494500			9247	997	6489	6496	10662;10663	10662					0.060515651996183806
FPFSFLAR	8	Unmodified	_FPFSFLAR_					0	0	0			REV__ENST00000593284.5_1_19:47987540-47987672:+|nuORF	REV__ENST00000593284.5_1_19:47987540-47987672:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2961120605469	2	492.76872	983.522887	0.01018	5.0163E-06	-1.4441	-0.00071163	-1.434	-0.00070661	492.7673806077947	54.768	0.42184	55.174	54.822	55.244	0.40663					12	9	2	0	0	0	0.4196	1	5549	5549		20.482	0	1	289710	+		9248	29227	6490	6497	10664	10664					0.03046696485330358
FPGAALLVSH	10	Unmodified	_FPGAALLVSH_					0	0	0		ENSG00000214309|ENST00000398075|MBLAC1	ENSG00000214309|ENST00000398075|MBLAC1	ENSG00000214309|ENST00000398075|MBLAC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.30078125	2	506.284734	1010.55492	-0.056988	-2.8852E-05	0.93896	0.00047538	0.88197	0.00044653	506.7855789096307	96.703	0.21397	96.765	96.651	96.865	0.062225					5	4	2	0	0	0	0.37624	1	10153	10153		21.96	0	1	14383			9249	8623	6491	6498	10665	10665					0.05006064168469493
FPGALTRPGQN	11	Unmodified	_FPGALTRPGQN_					0	0	0			REV__ENST00000382252.5_1_7:6694764-6695430:+|nuORF	REV__ENST00000382252.5_1_7:6694764-6695430:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	578.3197021484375	2	579.306729	1156.59891	0.6591	0.00038182	0.81348	0.00047125	1.4726	0.00085307	579.306716309531	92.355	1.7188	92.576	91.677	93.395	0.22157					65	40	2	0	0	0	0.17385	1	9278	9278		32.812	6.0163	1	87048	+		9250	25975	6492	6499	10666	10666					0.02687048594816588
FPGFFSPML	9	Oxidation (M)	_FPGFFSPM(Oxidation (M))L_		FPGFFSPM(1)L		FPGFFSPM(110)L	0	0	1		ENSG00000171560|ENST00000403106|FGA;nc|ENSG00000171560|P02671|FGA	ENSG00000171560|ENST00000403106|FGA	ENSG00000171560|ENST00000403106|FGA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.75439453125	2	529.754421	1057.49429	0.77207	0.00040901	-0.66238	-0.0003509	0.10969	5.8109E-05	529.7537782739512	96.157	1.1212	96.561	96.175	97.296	0.40451					58	26	3	0	0	0	0.036317	1	11578	11578		114.59	51.607	1	665750			9251	6682	6493	6500	10667	10667		114			-0.032157892061377424
FPGFFSPML	9	Oxidation (M)	_FPGFFSPM(Oxidation (M))L_					0	0	1		ENSG00000171560|ENST00000403106|FGA;nc|ENSG00000171560|P02671|FGA	ENSG00000171560|ENST00000403106|FGA	ENSG00000171560|ENST00000403106|FGA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	529.754421	1057.49429	1.9585	0.0010375	-2.0857	-0.0011049	-0.12718	-6.7376E-05	529.7531109145705	96.095	1.1214	96.516	95.989	97.111	0.42051	-0.022648	-0.00071636	NaN	114.59	62	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	540680			9252	6682	6493	6500				114			-0.032157892061377424
FPGPSELH	8	Unmodified	_FPGPSELH_					0	0	0		ENSG00000130513|ENST00000252809|GDF15	ENSG00000130513|ENST00000252809|GDF15	ENSG00000130513|ENST00000252809|GDF15	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7879943847656	2	442.21906	882.423567	-0.63207	-0.00027951	1.6025	0.00070867	0.97046	0.00042916	442.21950166202873	38.706	0.74564	39.228	38.75	39.496	0.52235					24	17	2	0	0	0	0.4196	1	3163	3163		46.766	23.244	1	53311			9253	3649	6494	6501	10668	10668					-0.022347461994399964
FPGPVGRQ	8	Unmodified	_FPGPVGRQ_					0	0	0			REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	429.2359619140625	2	429.235045	856.455536	-1.5383	-0.00066028	3.1941	0.001371	1.6559	0.00071075	429.23631228522396	63.563	2.4446	63.563	62.881	65.325	0					341	112	4	0	0	0	0.86288	1	5597	5597		26.796	0	1	5885000	+		9254	29809	6495	6502	10669	10669					0.02156666274379404
FPGWFGFG	8	Unmodified	_FPGWFGFG_					0	0	0		ENST00000316448.9_1_19:13054757-13054979:+|nuORF	ENST00000316448.9_1_19:13054757-13054979:+|nuORF	ENST00000316448.9_1_19:13054757-13054979:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.62384033203125	2	457.713414	913.412274	-1.7528	-0.00080228	-0.47085	-0.00021551	-2.2237	-0.0010178	457.71434500052925	107.12	0.1969	107.16	106.98	107.18	0.036125					7	4	3	0	0	0	0.4196	1	11400	11400		16.705	3.8933	1	74066			9255	9983	6496	6503	10670	10670					-0.04789523502904558
FPHLITIG	8	Unmodified	_FPHLITIG_					0	0	0			REV__ENSG00000089060|ENST00000680972|SLC8B1	REV__ENSG00000089060|ENST00000680972|SLC8B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.26068115234375	2	449.263271	896.511988	-1.381	-0.00062045	-4.4821	-0.0020136	-5.8631	-0.0026341	449.26107911518943	71.508	1.165	71.892	71.126	72.291	0.38449					61	27	3	0	0	0	0.87276	2	7982	7968;7982		37.028	7.8789	1	1175400	+		9256	16959	6497	6504	10671;10672	10672					0.059592941110508946
FPHLLSPS	8	Unmodified	_FPHLLSPS_					0	0	0		ENSG00000175548|ENST00000308742|ALG10B;ENSG00000139133|ENST00000266483|ALG10	ENSG00000175548|ENST00000308742|ALG10B	ENSG00000175548|ENST00000308742|ALG10B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.26068115234375	2	449.245078	896.475603	-1.4479	-0.00065045	2.4866	0.0011171	1.0388	0.00046666	449.2445659069985	71.636	0.12518	72.021	71.957	72.082	0.38449					4	2	2	0	0	0	0.4196	1	7982	7982		28.254	0	1	17743			9257	4347	6498	6505	10673	10673					0.023224172143386568
FPHNLSLTKII	11	Unmodified	_FPHNLSLTKII_					0	0	0			REV__ENST00000370766.7_1_X:134476327-134476507:-|nuORF	REV__ENST00000370766.7_1_X:134476327-134476507:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8822631835938	2	641.87953	1281.74451	1.6823	0.0010798	2.8836	0.0018509	4.5658	0.0029307	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.7144	1	10543	10543		29.17	1.0886	1	3772700	+		9258	25665	6499	6506	10674	10674					0.11490511390979918
FPHPILVVV	9	Unmodified	_FPHPILVVV_					0	0	0		chr7:121062950-121064238|21|38.05|0.09|8.68|+|2|TE_info:THE1B,THE1B_dup10260,ERVL-MaLR,LTR,donor,+,121062673,121062950|None,CPED1|2	chr7:121062950-121064238|21|38.05|0.09|8.68|+|2|TE_info:THE1B,THE1B_dup10260,ERVL-MaLR,LTR,donor,+,121062673,121062950|None,CPED1|2	chr7:121062950-121064238|21|38.05|0.09|8.68|+|2|TE_info:THE1B,THE1B_dup10260,ERVL-MaLR,LTR,donor,+,121062673,121062950|None,CPED1|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.22259521484375	2	510.81567	1019.61679	-0.74778	-0.00038198	-4.1223	-0.0021057	-4.8701	-0.0024877	510.8133905049578	88.995	0.76931	89.465	89.034	89.803	0.47068					40	18	3	0	0	0	0.20789	1	10490	10490		21.702	7.0382	1	907200			9259	489	6500	6507	10675	10675					0.10776415587622523
FPHPLKNKTK	10	Unmodified	_FPHPLKNKTK_					0	0	0		ENST00000455680.5_1_1:91297146-91297428:-|nuORF	ENST00000455680.5_1_1:91297146-91297428:-|nuORF	ENST00000455680.5_1_1:91297146-91297428:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.23187255859375	3	403.908269	1208.70298	-1.8207	-0.00073539	4.05	0.0016358	2.2293	0.00090043	404.24408801436766	84.731	0.60347	84.906	84.488	85.091	0.17561					22	13	2	0	0	0	0.37624	1	8215	8215		9.6461	0	1	115430			9260	11955	6501	6508	10676	10676					0.10697375422319055
FPHSHSPKDTV	11	Unmodified	_FPHSHSPKDTV_					0	0	0			REV__nc|ENSG00000203993|Q9H2J1|ARRDC1-AS1	REV__nc|ENSG00000203993|Q9H2J1|ARRDC1-AS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2066650390625	3	417.875405	1250.60439	-1.8339	-0.00076636	-2.2645	-0.00094627	-4.0984	-0.0017126	418.20811539449465	67.039	1.338	67.172	66.629	67.967	0.13326					83	55	2	0	0	0	0.71207	1	5995	5995		29.551	0.97402	1	186000	+		9261	25687	6502	6509	10677	10677					-0.010892726133761244
FPIGPPGPPG	10	Unmodified	_FPIGPPGPPG_					0	0	0			REV__ENSG00000082293|ENST00000620364|COL19A1	REV__ENSG00000082293|ENST00000620364|COL19A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.25494384765625	2	468.252903	934.491253	0.516	0.00024162	3.6072	0.0016891	4.1232	0.0019307	468.25439307684206	81.814	3.5851	81.751	80.618	84.204	-0.062943					157	83	2	0	0	0	0.70264	2	8235	8235;8285		44.531	9.3304	1	180670	+		9262	16838	6503	6510	10678;10679	10678					0.021387037313843393
FPIGPPGPPG	10	Unmodified	_FPIGPPGPPG_					0	0	0			REV__ENSG00000082293|ENST00000620364|COL19A1	REV__ENSG00000082293|ENST00000620364|COL19A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.25543212890625	2	468.252903	934.491253	-0.24701	-0.00011566	4.3697	0.0020461	4.1227	0.0019305	468.25479155810393	81.956	2.8945	82.014	80.909	83.803	0.057808					126	66	2	0	0	0	0.85976	1	8242	8242		35.201	0	1	193290	+		9263	16838	6503	6510	10680	10680					0.021387037313843393
FPIGPPGPPG	10	Unmodified	_FPIGPPGPPG_					0	0	0			REV__ENSG00000082293|ENST00000620364|COL19A1	REV__ENSG00000082293|ENST00000620364|COL19A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.25469970703125	2	468.252903	934.491253	0.60479	0.00028319	3.5063	0.0016418	4.1111	0.001925	468.25441943244317	81.627	3.5592	81.77	80.781	84.34	0.14352					144	82	2	0	0	0	0.70264	1	7844	7844		44.531	0	1	205460	+		9264	16838	6503	6510	10681	10681					0.021387037313843393
FPIIRDQIFRY	11	Unmodified	_FPIIRDQIFRY_					0	0	0		ENSG00000110429|ENST00000265651|FBXO3;nc|ENSG00000110429|Q9UK99-3|FBXO3;nc|ENSG00000110429|Q9UK99-2|FBXO3	ENSG00000110429|ENST00000265651|FBXO3	ENSG00000110429|ENST00000265651|FBXO3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.9409484863281	3	489.94175	1466.80342	-0.66495	-0.00032579	0.4093	0.00020053	-0.25565	-0.00012526	489.9418848207228	70.451	0.71014	70.835	70.542	71.252	0.38416					39	16	3	0	0	0	0.67762	1	7808	7808		35.178	11.8	1	367310			9265	2529	6504	6511	10682	10682					0.08868987685309548
FPIIRDQIFRY	11	Unmodified	_FPIIRDQIFRY_					0	0	0		ENSG00000110429|ENST00000265651|FBXO3;nc|ENSG00000110429|Q9UK99-3|FBXO3;nc|ENSG00000110429|Q9UK99-2|FBXO3	ENSG00000110429|ENST00000265651|FBXO3	ENSG00000110429|ENST00000265651|FBXO3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.9418640136719	3	489.94175	1466.80342	-0.31416	-0.00015392	0.27153	0.00013303	-0.04263	-2.0886E-05	490.2761707164862	70.438	0.67142	70.985	70.695	71.366	0.54754					43	16	4	0	0	0	0.71207	1	7837	7837		29.551	2.5034	1	454570			9266	2529	6504	6511	10683	10683					0.08868987685309548
FPIKISVVE	9	Unmodified	_FPIKISVVE_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3053588867188	2	516.310418	1030.60628	3.1033	0.0016022	4.4262	0.0022853	7.5295	0.0038875	516.312736387189	103.55	1.1906	103.5	102.99	104.18	-0.043755					71	28	3	0	0	0	0.78124	1	11429	11429		30.318	1.1682	1	574770	+		9267	20437;29946	6505	6512	10684	10684					0.09220388142512093
FPIKRHKRK	9	Unmodified	_FPIKRHKRK_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.39013671875	2	605.388191	1208.76183	-0.53776	-0.00032555	3.1784	0.0019242	2.6407	0.0015986	605.3900141549213	45.074	0.91728	45.043	44.621	45.538	-0.031067					52	20	3	0	0	0	0.7932	1	3644	3644		12.207	0	1	360790	+		9268	17348	6506	6513	10685	10685					0.16579896507278136
FPINVVKTR	9	Unmodified	_FPINVVKTR_					0	0	0		ENSG00000141437|ENST00000269205|SLC25A52;ENSG00000122696|ENST00000242275|SLC25A51	ENSG00000141437|ENST00000269205|SLC25A52	ENSG00000141437|ENST00000269205|SLC25A52	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.299072265625	2	537.326934	1072.63931	1.5085	0.00081054	-3.5098	-0.0018859	-2.0014	-0.0010754	537.3251502862614	101.73	0.59389	101.99	101.8	102.4	0.26322					22	14	2	0	0	0	0.20789	1	12373	12373		37.812	0	1	180920			9269	3241	6507	6514	10686	10686					0.10590014985223206
FPIPGEPGFPL	11	Unmodified	_FPIPGEPGFPL_					0	0	0		ENSG00000111229|ENST00000228825|ARPC3;ENST00000467622.2_1_12:110874278-110874939:-|nuORF	ENSG00000111229|ENST00000228825|ARPC3	ENSG00000111229|ENST00000228825|ARPC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.8165283203125	2	585.813325	1169.6121	0.82401	0.00048271	-0.50591	-0.00029637	0.31809	0.00018634	585.8129532141517	99.571	1.419	99.903	99.302	100.72	0.33294					85	35	3	0	0	0	0.53495	2	12020	12020;12032		49.442	6.5773	1	535250			9270	2561	6508	6515	10687;10688	10687					0.034074866542141535
FPIRAGVAAS	10	Unmodified	_FPIRAGVAAS_					0	0	0			REV__ENSG00000250120|ENST00000307360|PCDHA10	REV__ENSG00000250120|ENST00000307360|PCDHA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7798767089844	2	494.782359	987.550165	-1.4939	-0.00073914	-2.7072	-0.0013395	-4.2011	-0.0020786	494.78084579093485	83.794	2.8854	83.932	82.379	85.265	0.13811					127	66	3	0	0	0	0.86218	1	8201	8201		32.812	3.6629	1	242900	+		9271	23869	6509	6516	10689	10689					0.0558918002569726
FPIRENEMN	9	Unmodified	_FPIRENEMN_					0	0	0			REV__ENSG00000160007|ENST00000672722|ARHGAP35	REV__ENSG00000160007|ENST00000672722|ARHGAP35	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2689819335938	2	575.271498	1148.52844	-1.049	-0.00060349	-2.5232	-0.0014515	-3.5723	-0.002055	575.2699338315869	74.252	0.78546	74.643	74.248	75.033	0.3911					43	18	3	0	0	0	0.28163	1	8347	8347		66.429	2.8954	1	640200	+		9272	20688	6510	6517	10690	10690					-0.039879927851643515
FPITKKIEN	9	Unmodified	_FPITKKIEN_					0	0	0			REV__L1M3_dup291|chr1:173794566-173795729:+|2.4400345338826983|0.3648644439828962|2.74|63.0|5|1|sense	REV__L1M3_dup291|chr1:173794566-173795729:+|2.4400345338826983|0.3648644439828962|2.74|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3164672851562	2	545.318774	1088.623	0.15103	8.2357E-05	-4.1145	-0.0022437	-3.9634	-0.0021613	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.77244	1	8867	8867		32.812	2.4947	1	5755000	+		9273	29456	6511	6518	10691	10691					0.08222889028479585
FPITKKIEN	9	Unmodified	_FPITKKIEN_					0	0	0			REV__L1M3_dup291|chr1:173794566-173795729:+|2.4400345338826983|0.3648644439828962|2.74|63.0|5|1|sense	REV__L1M3_dup291|chr1:173794566-173795729:+|2.4400345338826983|0.3648644439828962|2.74|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3171997070312	2	545.318774	1088.623	0.15577	8.4944E-05	-3.7365	-0.0020376	-3.5808	-0.0019527	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.58063	3	9305	9058;9070;9305		47.96	15.147	1	17220000	+		9274	29456	6511	6518	10692;10693;10694	10694					0.08222889028479585
FPITLTKS	8	Unmodified	_FPITLTKS_					0	0	0			REV__ENSG00000034971|ENST00000037502|MYOC	REV__ENSG00000034971|ENST00000037502|MYOC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.7690124511719	2	453.768386	905.522219	0.022881	1.0383E-05	-0.31953	-0.00014499	-0.29665	-0.00013461	453.7681013564252	49.309	0.90843	49.306	49.004	49.912	-0.0030327					36	20	2	0	0	0	0.91005	1	4121	4121		42.474	0	1	137280	+		9275	16285	6512	6519	10695	10695					0.0656785704561571
FPITLTKSIGT	11	Unmodified	_FPITLTKSIGT_					0	0	0			REV__ENSG00000034971|ENST00000037502|MYOC	REV__ENSG00000034971|ENST00000037502|MYOC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.343017578125	2	589.344989	1176.67542	-0.6745	-0.00039751	-2.9294	-0.0017264	-3.6039	-0.002124	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.70737	1	10074	10074		30.318	1.1477	1	16185000	+		9276	16285	6513	6520	10696	10696					0.09415427371413898
FPITLTKSIGT	11	Unmodified	_FPITLTKSIGT_					0	0	0			REV__ENSG00000034971|ENST00000037502|MYOC	REV__ENSG00000034971|ENST00000037502|MYOC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3421630859375	2	589.344989	1176.67542	-1.324	-0.00078029	-2.4688	-0.001455	-3.7928	-0.0022353	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.7144	1	9103	9103		29.17	4.0441	1	5946500	+		9277	16285	6513	6520	10697	10697					0.09415427371413898
FPIYTTGKW	9	Unmodified	_FPIYTTGKW_					0	0	0		ENSG00000196131|ENST00000341702|VN1R2	ENSG00000196131|ENST00000341702|VN1R2	ENSG00000196131|ENST00000341702|VN1R2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.3034057617188	2	556.792392	1111.57023	-0.48121	-0.00026793	-3.2669	-0.001819	-3.7481	-0.0020869	556.7902701379148	44.881	0.36752	45.344	45.145	45.513	0.46313					13	8	2	0	0	0	0.20789	1	4133	4133		15.642	0	1	110600			9278	8015	6514	6521	10698	10698					0.01890930965669213
FPKDRMKTV	9	Unmodified	_FPKDRMKTV_					0	0	0		ENSG00000136542|ENST00000259056|GALNT5	ENSG00000136542|ENST00000259056|GALNT5	ENSG00000136542|ENST00000259056|GALNT5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3118896484375	2	561.310426	1120.6063	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.087	1	57.643	57.143	58.143	0.55512								0	0	0	0.29273	1	5936	5936		40.778	0	1				9279	4119	6515	6522	10699	10699					0.050820648708622684
FPKPIGLNKG	10	Unmodified	_FPKPIGLNKG_					0	0	0			REV__ENSG00000276747|ENST00000619609|PADI6	REV__ENSG00000276747|ENST00000619609|PADI6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.8212280273438	2	535.821484	1069.62842	-0.057962	-3.1058E-05	1.7	0.0009109	1.642	0.00087984	535.8222119662299	50.981	1.0017	51.015	50.55	51.551	0.034584					65	29	3	0	0	0	0.86589	1	4024	4024		29.15	2.4566	1	232670	+		9280	24020	6516	6523	10700	10700					0.09638612610933706
FPKQLAKAR	9	Unmodified	_FPKQLAKAR_					0	0	0		ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2426147460938	2	529.827101	1057.63965	-0.14851	-7.8684E-05	3.0752	0.0016293	2.9267	0.0015506	529.8286458556033	34.013	0.66876	34.015	33.667	34.335	0.0026054					21	14	2	0	0	0	0.20789	1	2031	2031		31.955	7.7521	1	30096			9281	8352	6517	6524	10701	10701					0.11313434705061809
FPLEPLHLF	9	Unmodified	_FPLEPLHLF_					0	0	0		ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.8085327148438	2	556.810585	1111.60662	1.3571	0.00075565	-1.2842	-0.00071504	0.072925	4.0605E-05	556.8098208940825	91.993	0.97783	92.441	92.096	93.074	0.44769					48	22	3	0	0	0	0.76402	1	10977	10977		35.201	1.0282	1	506940			9282	14495	6518	6525	10702	10702					0.055278078623587135
FPLFYPLY	8	Unmodified	_FPLFYPLY_					0	0	0			REV__chr2:26402144-26407596|39|11.64|0.34|5.08|+|0|TE_info:MER49,MER49_dup152,ERV1,LTR,acceptor,+,26407596,26408136|DRC1,None|7	REV__chr2:26402144-26407596|39|11.64|0.34|5.08|+|0|TE_info:MER49,MER49_dup152,ERV1,LTR,acceptor,+,26407596,26408136|DRC1,None|7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2783203125	2	530.281129	1058.54771	-0.036044	-1.9114E-05	-3.4411	-0.0018248	-3.4772	-0.0018439	530.2801983138189	59.193	1.3973	59.179	58.111	59.508	-0.013729					80	45	3	0	0	0	0.88393	1	5429	5429		33.493	0	1	262600	+		9283	15755	6519	6526	10703	10703					0.02077331568034424
FPLGPSGAR	9	Unmodified	_FPLGPSGAR_					0	0	0		ENST00000492902.2_1_10:104180789-104181110:-|nuORF	ENST00000492902.2_1_10:104180789-104181110:-|nuORF	ENST00000492902.2_1_10:104180789-104181110:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.24713134765625	2	451.248152	900.481751	0.43681	0.00019711	1.3662	0.00061648	1.803	0.00081359	451.2486012382637	65.524	1.1913	65.65	65.09	66.281	0.12532					110	62	3	0	0	0	0.78536	1	5828	5828		29.15	2.3535	1	1138900			9284	12711	6520	6527	10704	10704					0.02752935445857929
FPLGRWVLPRL	11	Unmodified	_FPLGRWVLPRL_					0	0	0			REV__ENSG00000183134|ENST00000332539|PTGDR2	REV__ENSG00000183134|ENST00000332539|PTGDR2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9430236816406	3	451.943313	1352.80811	-1.6861	-0.00076203	1.515	0.00068469	-0.17112	-7.7337E-05	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.76251	1	4434	4434		19.263	0.73163	1	792670	+		9285	22580	6521	6528	10705	10705					0.14581916618749347
FPLGRWVLPRL	11	Unmodified	_FPLGRWVLPRL_					0	0	0			REV__ENSG00000183134|ENST00000332539|PTGDR2	REV__ENSG00000183134|ENST00000332539|PTGDR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.94305419921875	3	451.943313	1352.80811	-0.61036	-0.00027585	0.65425	0.00029569	0.043898	1.9839E-05	451.94349825987973	55.257	1.4276	55.22	54.668	56.095	-0.036823					123	46	4	0	0	0	0.73621	1	4657	4657		25.126	0.89417	1	459960	+		9286	22580	6521	6528	10706	10706					0.14581916618749347
FPLGTPRL	8	Unmodified	_FPLGTPRL_					0	0	0			REV__ENST00000595775.5_1_19:42817488-42818494:+|nuORF	REV__ENST00000595775.5_1_19:42817488-42818494:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7699279785156	2	450.76872	899.522887	0.30122	0.00013578	3.8804	0.0017492	4.1816	0.0018849	450.7704917005837	50.629	0.72826	50.679	50.146	50.874	0.049896					40	22	2	0	0	0	0.884	1	4002	4002		33.516	3.0119	1	74148			9287	29251	6522	6529	10707	10707					0.06910696485306289
FPLHYGCHS	9	Unmodified	_FPLHYGCHS_					0	0	0			REV__ENST00000423554.5_1_5:154200818-154202893:-|nuORF	REV__ENST00000423554.5_1_5:154200818-154202893:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.5167846679688	2	530.737094	1059.45964	-0.48422	-0.00025699	1.6833	0.00089337	1.199	0.00063637	530.737921687949	30.016	0.44048	30.044	29.833	30.274	0.028618					20	9	3	0	0	0	0.20789	1	1937	1937		31.955	14.59	1	124360	+		9288	21643	6523	6530	10708	10708					-0.0677161229423291
FPLHYGCHS	9	Unmodified	_FPLHYGCHS_					0	0	0			REV__ENST00000423554.5_1_5:154200818-154202893:-|nuORF	REV__ENST00000423554.5_1_5:154200818-154202893:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	530.737094	1059.45964	0.23778	0.0001262	1.5109	0.00080187	1.7486	0.00092807	530.7375260403116	30.133	0.39238	30.043	29.875	30.267	-0.089546	-0.00037624	-0.00013685	NaN	31.955	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	152820	+		9289	21643	6523	6530							-0.0677161229423291
FPLIKNEND	9	Unmodified	_FPLIKNEND_					0	0	0			REV__nc|ENSG00000135457|Q12800-2|TFCP2	REV__nc|ENSG00000135457|Q12800-2|TFCP2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.28076171875	2	545.282389	1088.55022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.954	1	61.055	60.555	61.555	0.10082								0	0	0	0.30053	1	5298	5298		30.504	1.3336	1		+		9290	19224	6524	6531	10709	10709					0.009491352350551097
FPLKLRLMS	9	Unmodified	_FPLKLRLMS_					0	0	0		ENST00000357355.7_1_19:14519317-14519449:+|nuORF	ENST00000357355.7_1_19:14519317-14519449:+|nuORF	ENST00000357355.7_1_19:14519317-14519449:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8334350585938	2	552.833537	1103.65252	0.70436	0.0003894	-0.082169	-4.5426E-05	0.62219	0.00034397	552.8335720406732	83.834	1.6836	83.982	83.396	85.079	0.14789					58	38	2	0	0	0	0.7932	1	8196	8196		21.96	1.013	1	196450			9291	10385	6525	6532	10710	10710					0.10484129772953565
FPLLTVYLKVF	11	Unmodified	_FPLLTVYLKVF_					0	0	0		nc|ENSG00000165731|P07949-2|RET;ENSG00000165731|ENST00000355710|RET	nc|ENSG00000165731|P07949-2|RET	nc|ENSG00000165731|P07949-2|RET	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.27349853515625	3	447.272325	1338.79515	0.74994	0.00033543	0.43087	0.00019272	1.1808	0.00052814	447.27246467576646	106.88	1.1653	106.97	106.51	107.68	0.091255					134	27	6	0	0	0	0.74771	1	11530	11530		22.562	6.5548	1	19906000			9292	6119	6526	6533	10711	10711					0.13930040715968062
FPLPAGKRP	9	Unmodified	_FPLPAGKRP_					0	0	0		ENSG00000168621|ENST00000326524|GDNF;nc|ENSG00000168621|P39905-3|GDNF	ENSG00000168621|ENST00000326524|GDNF	ENSG00000168621|ENST00000326524|GDNF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7970886230469	2	491.795269	981.575986	-1.9211	-0.00094481	3.072	0.0015108	1.1509	0.00056599	491.7967978123057	73.119	0.75326	73.161	72.514	73.267	0.042114					44	31	2	0	0	0	0.7932	1	7049	7049		20.482	1.1219	1	96217			9293	6420	6527	6534	10712	10712					0.08446074267999393
FPLPAGKRP	9	Unmodified	_FPLPAGKRP_					0	0	0		ENSG00000168621|ENST00000326524|GDNF;nc|ENSG00000168621|P39905-3|GDNF	ENSG00000168621|ENST00000326524|GDNF	ENSG00000168621|ENST00000326524|GDNF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7962341308594	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.785	1	58.819	58.319	59.319	0.033905								0	0	0	0.32159	1	5403	5403		23.042	2.5607	1				9294	6420	6527	6534	10713	10713					0.08446074267999393
FPLPKNLLAKV	11	Unmodified	_FPLPKNLLAKV_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30;ENST00000441384.5_1_3:47852163-47883242:+|nuORF	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	620.3178100585938	2	620.394816	1238.77508	-0.65007	-0.0004033	0.67694	0.00041997	0.026869	1.667E-05	620.8968842629592	44.889	0.89077	44.885	44.165	45.056	-0.0041618					32	20	2	0	0	0	0.17385	1	3458	3458		4.9057	0	1	71547			9295	3766	6528	6535	10714	10714					0.1652428977602085
FPLPRKSGGY	10	Unmodified	_FPLPRKSGGY_					0	0	0			REV__ENSG00000149115|ENST00000358252|TNKS1BP1	REV__ENSG00000149115|ENST00000358252|TNKS1BP1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3116455078125	2	561.308741	1120.60293	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.8	1	58.353	57.853	58.853	0.55323								0	0	0	0.45132	1	6045	6045		32.812	3.6629	1		+		9296	20149	6529	6536	10715	10715					0.047451380885149774
FPLTVSFVN	9	Unmodified	_FPLTVSFVN_					0	0	0			REV__chr15:95326637-95359504|37|13.3|0.0|20.34|+|1|LINC00924,LINC00924|1	REV__chr15:95326637-95359504|37|13.3|0.0|20.34|+|1|LINC00924,LINC00924|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.2813720703125	2	512.279118	1022.54368	0.68771	0.0003523	3.6398	0.0018646	4.3276	0.0022169	512.280910573943	86.397	3.3825	86.546	85.297	88.68	0.14902					148	79	2	0	0	0	0.76255	1	8513	8513		35.618	3.6634	1	371240	+		9297	15626	6530	6537	10716	10716					0.03331242074330021
FPLVQQGKL	9	Unmodified	_FPLVQQGKL_					0	0	0			REV__nc|ENSG00000118513|P10242-11|MYB	REV__nc|ENSG00000118513|P10242-11|MYB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.312255859375	2	515.30821	1028.60187	-0.31027	-0.00015988	3.4472	0.0017764	3.1369	0.0016165	515.309789573958	59.477	1.1647	60.03	59.456	60.621	0.55323					75	29	3	0	0	0	0.18566	1	6218	6218		76.847	8.3619	1	1098000	+		9298	29804	6531	6538	10717	10717					0.08870923719609891
FPLWLRPLVN	10	Unmodified	_FPLWLRPLVN_					0	0	0			REV__ENST00000382038.6_1_5:34911808-34913609:-|nuORF	REV__ENST00000382038.6_1_5:34911808-34913609:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.5826110839844	3	418.916764	1253.72846	0.45588	0.00019098	-1.8915	-0.00079236	-1.4356	-0.00060139	418.91581979982993	37.905	0.37373	38.218	38.055	38.429	0.31312					13	9	2	0	0	0	0.37624	1	3100	3100		28.081	0	1	94228	+		9299	25063	6532	6539	10718	10718					0.11174849944745802
FPLYKLNRN	9	Unmodified	_FPLYKLNRN_					0	0	0			REV__ENSG00000122176|ENST00000354955|FMOD	REV__ENSG00000122176|ENST00000354955|FMOD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8328857421875	2	582.82984	1163.64513	2.3168	0.0013503	2.518	0.0014676	4.8348	0.0028179	582.8313275695042	94.548	3.2085	94.489	93.331	96.54	-0.059212					184	75	3	0	0	0	0.7932	1	9991	9991		26.796	2.2769	1	663000	+		9300	18481	6533	6540	10719	10719					0.06985113496921258
FPMPEELLF	9	Unmodified	_FPMPEELLF_					0	0	0			REV__ENST00000522591.1_2_8:143784477-143784786:+|nuORF	REV__ENST00000522591.1_2_8:143784477-143784786:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.310546875	2	561.780636	1121.54672	-0.56902	-0.00031966	3.9648	0.0022273	3.3958	0.0019077	562.2843712790735	57.796	1.2045	58.19	57.697	58.901	0.39408					44	29	2	0	0	0	0.20789	1	6053	6053		47.916	29.591	1	295170	+		9301	20747	6534	6541	10720	10720					-0.009192508631713281
FPMTHGNTGF	10	Oxidation (M)	_FPM(Oxidation (M))THGNTGF_		FPM(1)THGNTGF		FPM(100)THGNTGF	0	0	1		ENST00000547987.2_1_12:53854819-53861193:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.7427978515625	2	562.745116	1123.47568	-0.61665	-0.00034702	-0.93872	-0.00052826	-1.5554	-0.00087527	562.744332101397	43.068	1.5424	43.501	43.006	44.549	0.4334					81	37	3	0	0	0	0.081281	2	3886	3874;3886		104.06	36.563	1	847220			9302	8135	6535	6542	10721;10722	10722		139			-0.08111950847978733
FPMTHGNTGF	10	Oxidation (M)	_FPM(Oxidation (M))THGNTGF_		FPM(1)THGNTGF		FPM(86)THGNTGF	0	0	1		ENST00000547987.2_1_12:53854819-53861193:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.7435302734375	2	562.745116	1123.47568	-0.24648	-0.00013871	-0.26111	-0.00014694	-0.5076	-0.00028565	562.7447652648781	45.458	1.8621	45.921	44.985	46.847	0.46313					91	45	4	0	0	0	0.20077	1	4216	4216		85.862	32.925	1	687790			9303	8135	6535	6542	10723	10723		139			-0.08111950847978733
FPMTHGNTGF	10	Oxidation (M)	_FPM(Oxidation (M))THGNTGF_		FPM(1)THGNTGF		FPM(83)THGNTGF	0	0	1		ENST00000547987.2_1_12:53854819-53861193:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.7440795898438	2	562.745116	1123.47568	-0.38529	-0.00021682	-0.37722	-0.00021228	-0.76251	-0.0004291	562.744783142017	45.226	2.0107	46.122	45.235	47.246	0.89542					91	49	2	0	0	0	0.21391	1	4211	4211		82.75	31.558	1	597700			9304	8135	6535	6542	10724	10724		139			-0.08111950847978733
FPMTHGNTGF	10	Unmodified	_FPMTHGNTGF_					0	0	0		ENST00000547987.2_1_12:53854819-53861193:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.7476806640625	2	554.747659	1107.48076	0.1697	9.414E-05	-0.084011	-4.6605E-05	0.085688	4.7535E-05	554.7474485226055	50.181	2.0303	50.629	50.143	52.173	0.44761					117	48	3	0	0	0	3.3045E-07	6	4908	4896;4908;4919;4932;4944;4955		154.12	82.241	1	2079400			9305	8135	6535	6543	10725;10726;10727;10728;10729;10730	10726					-0.06867646985347164
FPMTHGNTGF	10	Unmodified	_FPMTHGNTGF_					0	0	0		ENST00000547987.2_1_12:53854819-53861193:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7478637695312	2	554.747659	1107.48076	0.74742	0.00041463	-0.6072	-0.00033684	0.14022	7.7787E-05	554.7471238649123	50.042	1.9289	50.887	50.354	52.283	0.84501					115	46	3	0	0	0	3.3045E-07	8	4909	4887;4897;4909;4921;4933;4945;4957;4978		154.12	77.344	1	2398400			9306	8135	6535	6543	10731;10732;10733;10734;10735;10736;10737;10738	10733					-0.06867646985347164
FPNAIEHTL	9	Unmodified	_FPNAIEHTL_					0	0	0		ENST00000490869.1_1_X:47063082-47065999:+|nuORF;nc|ENSG00000130985|P22314-2|UBA1;ENSG00000130985|ENST00000335972|UBA1	ENST00000490869.1_1_X:47063082-47065999:+|nuORF	ENST00000490869.1_1_X:47063082-47065999:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2716064453125	2	521.271824	1040.5291	0.85582	0.00044611	-0.98483	-0.00051337	-0.12902	-6.7253E-05	521.2711995930783	55.041	2.3001	55.442	53.939	56.239	0.40101					108	54	3	0	0	0	0.0030376	6	5621	5582;5597;5609;5621;5633;5645		139.97	43.125	1	1444900			9307	3704	6536	6544	10739;10740;10741;10742;10743;10744	10742					0.010451699261921021
FPNAIEHTL	9	Unmodified	_FPNAIEHTL_					0	0	0		ENST00000490869.1_1_X:47063082-47065999:+|nuORF;nc|ENSG00000130985|P22314-2|UBA1;ENSG00000130985|ENST00000335972|UBA1	ENST00000490869.1_1_X:47063082-47065999:+|nuORF	ENST00000490869.1_1_X:47063082-47065999:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.2716064453125	2	521.271824	1040.5291	-0.13025	-6.7897E-05	-0.014092	-7.3458E-06	-0.14435	-7.5243E-05	521.2716557645425	54.811	2.0064	55.38	54.275	56.281	0.56836					100	47	3	0	0	0	5.5105E-05	5	5636	5599;5611;5623;5636;5648		148.99	50.357	1	1599700			9308	3704	6536	6544	10745;10746;10747;10748;10749	10748					0.010451699261921021
FPNEPGVI	8	Unmodified	_FPNEPGVI_					0	0	0			REV__ENST00000317012.4_1_3:111313301-111313424:-|nuORF	REV__ENST00000317012.4_1_3:111313301-111313424:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2678527832031	2	436.729261	871.443968	1.2379	0.00054064	1.429	0.00062408	2.6669	0.0011647	436.7297492650861	50.889	0.40297	50.897	50.607	51.01	0.0077438					37	16	3	0	0	0	0.4196	1	4354	4354		28.254	9.9299	1	81827	+		9309	24957	6537	6545	10750	10750					0.0031042446039464267
FPNHSLTL	8	Unmodified	_FPNHSLTL_					0	0	0		ENSG00000181790|ENST00000517894|ADGRB1	ENSG00000181790|ENST00000517894|ADGRB1	ENSG00000181790|ENST00000517894|ADGRB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.74798583984375	2	464.747985	927.481417	-0.28675	-0.00013327	0.63286	0.00029412	0.34611	0.00016086	464.7479895288426	27.515	0.71511	27.477	27.165	27.88	-0.038523					32	16	4	0	0	0	0.90523	1	1336	1336		40.778	3.6191	1	76712			9310	7405	6538	6546	10751	10751					0.01477515725991907
FPNRLLSK	8	Unmodified	_FPNRLLSK_					0	0	0			REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7903747558594	2	487.792727	973.5709	-1.4694	-0.00071678	-3.0475	-0.0014866	-4.5169	-0.0022033	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.89494	1	8128	8128		37.159	5.2042	1	607090	+		9311	17039	6539	6547	10752	10752					0.08305770405388557
FPPCQLKPY	9	Carbamidomethyl (C)	_FPPC(Carbamidomethyl (C))QLKPY_	FPPC(1)QLKPY		FPPC(41)QLKPY		0	1	0			REV__chr18:53066166-53157356|14|31.07|0.76|5.36|+|1|DCC,DCC|2	REV__chr18:53066166-53157356|14|31.07|0.76|5.36|+|1|DCC,DCC|2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.2913818359375	2	575.291702	1148.56885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.613	1	54.587	54.087	55.087	-0.025955								0	0	0	0.29103	1	4934	4934		40.573	8.6178	1		+		9312	15674	6540	6548	10753	10753	206				0.0005097360524359829
FPPGLLHS	8	Unmodified	_FPPGLLHS_					0	0	0		ENSG00000164841|ENST00000297459|TMEM74	ENSG00000164841|ENST00000297459|TMEM74	ENSG00000164841|ENST00000297459|TMEM74	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2394104003906	2	434.239796	866.465038	-1.6755	-0.00072758	1.2625	0.00054823	-0.41303	-0.00017935	434.2408343101485	28.592	0.11538	28.661	28.617	28.732	0.068678					6	5	2	0	0	0	0.4196	1	1186	1186		20.482	0	1	16599			9313	6010	6541	6549	10754	10754					0.026464345599038097
FPPKLSVALP	10	Unmodified	_FPPKLSVALP_					0	0	0			REV__ENSG00000099904|ENST00000334554|ZDHHC8	REV__ENSG00000099904|ENST00000334554|ZDHHC8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.78759765625	2	534.826235	1067.63792	-0.33793	-0.00018073	0.10285	5.5007E-05	-0.23508	-0.00012572	534.8261550855605	78.408	0.58951	78.971	78.701	79.29	0.56332					28	13	3	0	0	0	0.37624	1	8958	8958		27.882	13.017	1	270910	+		9314	17115	6542	6550	10755	10755					0.10680380896474162
FPPLPTAPV	9	Unmodified	_FPPLPTAPV_					0	0	0		ENST00000374751.7_1_10:35360216-35379558:-|nuORF;ENST00000374754.8_1_10:35379243-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.771728515625	2	469.770929	937.527304	-1.3683	-0.00064278	1.8094	0.00085002	0.44113	0.00020723	469.7717183606964	38.655	0.84388	39.177	38.87	39.714	0.52235					49	19	4	0	0	0	0.77546	1	3238	3238		31.955	2.1133	1	845760			9315	10785	6543	6551	10756	10756					0.056041609082285504
FPPLPTAPV	9	Unmodified	_FPPLPTAPV_					0	0	0		ENST00000374751.7_1_10:35360216-35379558:-|nuORF;ENST00000374754.8_1_10:35379243-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	469.770929	937.527304	0.15119	7.1026E-05	0.55388	0.00026019	0.70507	0.00033122	469.770944245732	39.434	0.53694	39.404	39.157	39.694	-0.03027	0.14724	-0.0011834	NaN	31.955	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113550			9316	10785	6543	6551							0.056041609082285504
FPPLPTAPV	9	Unmodified	_FPPLPTAPV_					0	0	0		ENST00000374751.7_1_10:35360216-35379558:-|nuORF;ENST00000374754.8_1_10:35379243-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	469.770929	937.527304	-1.239	-0.00058203	1.7242	0.00080998	0.48523	0.00022795	469.7716157713445	39.33	0.62939	39.283	39.076	39.706	-0.047001	0.026965	-8.3841E-05	NaN	31.955	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93219			9317	10785	6543	6551							0.056041609082285504
FPPLPTAPV	9	Unmodified	_FPPLPTAPV_					0	0	0		ENST00000374751.7_1_10:35360216-35379558:-|nuORF;ENST00000374754.8_1_10:35379243-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	469.770929	937.527304	-2.1574	-0.0010135	2.884	0.0013548	0.72658	0.00034132	469.7720518031531	39.351	0.66916	39.362	38.976	39.646	0.011173	0.10566	0.0010058	NaN	31.955	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77676			9318	10785	6543	6551							0.056041609082285504
FPPLPTAPV	9	Unmodified	_FPPLPTAPV_					0	0	0		ENST00000374751.7_1_10:35360216-35379558:-|nuORF;ENST00000374754.8_1_10:35379243-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	469.770929	937.527304	0.21792	0.00010237	0.73584	0.00034568	0.95377	0.00044805	469.7711616394864	39.188	0.45496	39.276	39.034	39.489	0.088375	0.019996	-0.0010125	NaN	31.955	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141310			9319	10785	6543	6551							0.056041609082285504
FPPLPTAPV	9	Unmodified	_FPPLPTAPV_					0	0	0		ENST00000374751.7_1_10:35360216-35379558:-|nuORF;ENST00000374754.8_1_10:35379243-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	469.770929	937.527304	0.020408	9.5871E-06	1.0054	0.00047231	1.0258	0.0004819	469.7710438712153	39.299	0.48149	39.246	38.936	39.418	-0.052731	-0.010042	-0.00075918	NaN	31.955	25	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147340			9320	10785	6543	6551							0.056041609082285504
FPPPDVEQP	9	Unmodified	_FPPPDVEQP_					0	0	0		ENSG00000114999|ENST00000233336|TTL	ENSG00000114999|ENST00000233336|TTL	ENSG00000114999|ENST00000233336|TTL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.9554443359375	2	513.250557	1024.48656	-1.8608	-0.00095508	-3.7659	-0.0019329	-5.6268	-0.0028879	513.2486131197329	41.63	0.30374	42.043	41.86	42.163	0.4139					13	7	2	0	0	0	0.20789	1	3659	3659		20.947	3.582	1	203300			9321	2805	6544	6552	10757	10757					-0.024702252020460946
FPPPLLLF	8	Unmodified	_FPPPLLLF_					0	0	0		ENST00000370790.5_1_X:133930354-133930591:-|nuORF	ENST00000370790.5_1_X:133930354-133930591:-|nuORF	ENST00000370790.5_1_X:133930354-133930591:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28753662109375	2	472.286214	942.557876	-0.91683	-0.000433	3.9626	0.0018715	3.0458	0.0014385	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.84567	1	9992	9992		24.504	0.30126	1	50946000			9322	10649	6545	6553	10758	10758					0.08429939293296229
FPPPLTINMYT	11	Unmodified	_FPPPLTINMYT_					0	0	0			REV__ENSG00000112218|ENST00000229955|GPR63	REV__ENSG00000112218|ENST00000229955|GPR63	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5975646972656	3	431.889775	1292.6475	2.4483	0.0010574	-0.86799	-0.00037488	1.5803	0.00068253	432.22222860555047	106.68	0.17816	106.72	106.63	106.81	0.03688					6	3	2	0	0	0	0.17243	1	11699	11699		22.562	0	1	19149	+		9323	17927	6546	6554	10759	10759					0.012877811196858602
FPPPPIPSF	9	Unmodified	_FPPPPIPSF_					0	0	0			REV__ENSG00000213079|ENST00000367178|SCAF8	REV__ENSG00000213079|ENST00000367178|SCAF8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7472839355469	2	499.770929	997.527304	0.054033	2.7004E-05	-3.1497	-0.0015741	-3.0957	-0.0015471	499.7691705543214	74.617	0.57391	75.175	74.962	75.536	0.5589					31	13	3	0	0	0	0.20789	1	8426	8426		52.299	0	1	227990	+		9324	23608	6547	6555	10760	10760					0.02844160908239246
FPPRPERVEH	10	Unmodified	_FPPRPERVEH_					0	0	0		nc|ENSG00000078319|A4D2B8-3|PMS2P1;nc|ENSG00000078319|A4D2B8-2|PMS2P1;nc|ENSG00000078319|A4D2B8|PMS2P1	nc|ENSG00000078319|A4D2B8-3|PMS2P1	nc|ENSG00000078319|A4D2B8-3|PMS2P1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.2317199707031	3	421.891278	1262.652	-1.6887	-0.00071245	-2.349	-0.00099103	-4.0377	-0.0017035	421.8903149113873	42.607	0.41433	43.305	43.091	43.506	0.69754					13	9	2	0	0	0	0.37624	1	3806	3806		32.751	3.1998	1	189970			9325	14785	6548	6556	10761	10761					0.031184263774548526
FPPVGEELN	9	Unmodified	_FPPVGEELN_					0	0	0			REV__nc|ENSG00000136869|O00206-3|TLR4	REV__nc|ENSG00000136869|O00206-3|TLR4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2904052734375	2	501.250557	1000.48656	-0.50727	-0.00025427	1.3516	0.00067748	0.84431	0.00042321	501.251301666711	86.156	0.25002	86.341	86.249	86.499	0.18523					7	5	2	0	0	0	0.20789	1	8452	8452		23.042	0	1	24166	+		9326	19343	6549	6557	10762	10762					-0.013662252020367305
FPQLSGPR	8	Unmodified	_FPQLSGPR_					0	0	0			REV__ENST00000245451.8_1_14:54420070-54423396:-|nuORF	REV__ENST00000245451.8_1_14:54420070-54423396:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2489318847656	2	451.248152	900.481751	-1.5029	-0.0006782	3.2139	0.0014503	1.711	0.00077208	451.24948444631724	65.955	1.2112	65.955	65.412	66.623	0					127	65	2	0	0	0	0.8621	1	5835	5835		26.693	1.2427	1	815400	+		9327	24253	6550	6558	10763	10763					0.02752935445857929
FPQLVAIEQVA	11	Unmodified	_FPQLVAIEQVA_					0	0	0			REV__ENST00000406735.6_1_7:91506280-91509986:-|nuORF	REV__ENST00000406735.6_1_7:91506280-91509986:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.8985900878906	3	405.564168	1213.67067	-1.8662	-0.00075687	3.2637	0.0013236	1.3975	0.00056676	405.5653987385133	59.885	1.7634	59.979	59.006	60.769	0.094059					140	62	3	0	0	0	0.7434	1	5141	5141		15.921	0	1	349460	+		9328	25342	6551	6559	10764	10764					0.07238543228640992
FPQQTAKAVA	10	Unmodified	_FPQQTAKAVA_					0	0	0			REV__ENSG00000140740|ENST00000268379|UQCRC2	REV__ENSG00000140740|ENST00000268379|UQCRC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3187866210938	2	530.792924	1059.57129	1.8174	0.00096467	1.3039	0.00069208	3.1213	0.0016567	530.7934301100272	94.39	0.75945	94.822	94.562	95.322	0.4324					29	17	2	0	0	0	0.37624	1	11315	11315		45.972	21.453	1	218920	+		9329	19639	6552	6560	10765	10765					0.04389145334562272
FPQSASLPPY	10	Unmodified	_FPQSASLPPY_					0	0	0		ENSG00000043462|ENST00000046794|LCP2	ENSG00000043462|ENST00000046794|LCP2	ENSG00000043462|ENST00000046794|LCP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.7802734375	2	553.779482	1105.54441	-1.22	-0.00067562	1.173	0.00064957	-0.047048	-2.6054E-05	553.7799402386626	58.748	0.50238	59.14	58.857	59.359	0.39209					33	11	3	0	0	0	0.4892	1	6154	6154		56.721	5.3856	1	640100			9330	942	6553	6561	10766	10766					-0.004139632766282375
FPRAGSHAR	9	Unmodified	_FPRAGSHAR_					0	0	0			REV__ENSG00000181444|ENST00000302017|ZNF467	REV__ENSG00000181444|ENST00000302017|ZNF467	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	499.30194091796875	2	499.767575	997.520596	-0.61671	-0.00030821	2.7643	0.0013815	2.1476	0.0010733	500.26885473820647	37.558	0.13995	37.574	37.511	37.651	0.016563					5	3	2	0	0	0	0.20789	1	2168	2168		38.806	10.924	1	24123	+		9331	22461	6554	6562	10767	10767					0.021736608002242974
FPREGRHS	8	Unmodified	_FPREGRHS_					0	0	0			REV__ENSG00000181444|ENST00000302017|ZNF467	REV__ENSG00000181444|ENST00000302017|ZNF467	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.29949951171875	2	493.251757	984.488962	-0.67634	-0.0003336	3.2675	0.0016117	2.5912	0.0012781	493.2532388886638	57.423	1.54	57.502	57.063	58.603	0.079643					171	71	4	0	0	0	0.4196	1	4816	4816		38.806	12.01	1	1540900	+		9332	22461	6555	6563	10768	10768					-0.003903319537130301
FPRHIEPEL	9	Unmodified	_FPRHIEPEL_					0	0	0		ENSG00000146574|ENST00000316731|CCZ1B;ENSG00000122674|ENST00000325974|CCZ1	ENSG00000146574|ENST00000316731|CCZ1B	ENSG00000146574|ENST00000316731|CCZ1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.3084716796875	2	569.306198	1136.59784	-0.25156	-0.00014322	0.32785	0.00018664	0.076282	4.3428E-05	569.3059650025069	46.926	0.54336	47.849	47.695	48.238	0.92315					25	12	3	0	0	0	0.17181	1	4463	4463		79.713	0	1	831470			9333	3238	6556	6564	10769	10769					0.035008342259061465
FPRHIEPEL	9	Unmodified	_FPRHIEPEL_					0	0	0		ENSG00000146574|ENST00000316731|CCZ1B;ENSG00000122674|ENST00000325974|CCZ1	ENSG00000146574|ENST00000316731|CCZ1B	ENSG00000146574|ENST00000316731|CCZ1B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	569.306198	1136.59784	-0.8391	-0.0004777	0.61572	0.00035053	-0.22338	-0.00012717	569.3064190326215	47.166	0.51304	47.637	47.344	47.857	0.47139	-0.10583	9.8913E-05	NaN	79.713	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	569270			9334	3238	6556	6564							0.035008342259061465
FPRPARVFGCR	11	Unmodified	_FPRPARVFGCR_					0	0	0		ENST00000260599.10_3_2:27309825-27310158:+|nuORF	ENST00000260599.10_3_2:27309825-27310158:+|nuORF	ENST00000260599.10_3_2:27309825-27310158:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.2427673339844	3	435.904753	1304.69243	-0.40211	-0.00017528	2.1975	0.00095791	1.7954	0.00078263	435.90489639864523	16.262	0.11844	16.182	16.123	16.241	-0.080017					8	4	2	0	0	0	0.74405	1	94	94		23.378	3.3474	1	14991			9335	9388	6557	6565	10770	10770					0.05227069496254444
FPRPARVFGCR	11	Unmodified	_FPRPARVFGCR_					0	0	0		ENST00000260599.10_3_2:27309825-27310158:+|nuORF	ENST00000260599.10_3_2:27309825-27310158:+|nuORF	ENST00000260599.10_3_2:27309825-27310158:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	435.904753	1304.69243	1.9891	0.00086708	-1.2013	-0.00052366	0.78783	0.00034342	436.2382776491268	16.181	0.10011	16.097	16.055	16.155	-0.083364	-0.1113	0.0014809	NaN	23.378	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19926			9336	9388	6557	6565							0.05227069496254444
FPRPARVFGCR	11	Unmodified	_FPRPARVFGCR_					0	0	0		ENST00000260599.10_3_2:27309825-27310158:+|nuORF	ENST00000260599.10_3_2:27309825-27310158:+|nuORF	ENST00000260599.10_3_2:27309825-27310158:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	435.904753	1304.69243	-1.6596	-0.00072344	-7.1939	-0.0031359	-8.8536	-0.0038593	435.90152098844203	16.298	0.11224	16.346	16.289	16.402	0.047804	0.13734	-0.0063557	NaN	23.378	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18485			9337	9388	6557	6565							0.05227069496254444
FPRRASSR	8	Unmodified	_FPRRASSR_					0	0	0			REV__ENST00000432920.2_1_1:226111853-226111940:-|nuORF	REV__ENST00000432920.2_1_1:226111853-226111940:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	488.7774963378906	2	488.7754	975.536246	-0.08446	-4.1282E-05	2.739	0.0013388	2.6546	0.0012975	488.77667950614386	80.52	0.6187	80.582	80.259	80.877	0.062225					27	18	2	0	0	0	0.89043	1	7877	7877		35.618	0	1	90931	+		9338	26641	6558	6566	10771	10771					0.04749947317282022
FPRSAALA	8	Unmodified	_FPRSAALA_					0	0	0		ENST00000505686.5_1_5:124080234-124080321:-|nuORF	ENST00000505686.5_1_5:124080234-124080321:-|nuORF	ENST00000505686.5_1_5:124080234-124080321:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	416.7366638183594	2	416.73742	831.460287	-0.025986	-1.0829E-05	-1.2896	-0.00053742	-1.3156	-0.00054825	416.73691266354535	35.363	0.44613	35.308	35.123	35.569	-0.055153					28	14	4	0	0	0	0.82464	1	1854	1854		21.702	1.2205	1	442650			9339	12928	6559	6567	10772	10772					0.037815504171248904
FPRSAALA	8	Unmodified	_FPRSAALA_					0	0	0		ENST00000505686.5_1_5:124080234-124080321:-|nuORF	ENST00000505686.5_1_5:124080234-124080321:-|nuORF	ENST00000505686.5_1_5:124080234-124080321:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7369384765625	2	416.73742	831.460287	0.069639	2.9021E-05	-1.362	-0.00056759	-1.2923	-0.00053857	416.7368250474704	38.634	0.86422	38.976	38.537	39.401	0.34187					55	20	4	0	0	0	0.9159	1	3170	3170		44.531	17.735	1	1714900			9340	12928	6559	6567	10773	10773					0.037815504171248904
FPRSAALA	8	Unmodified	_FPRSAALA_					0	0	0		ENST00000505686.5_1_5:124080234-124080321:-|nuORF	ENST00000505686.5_1_5:124080234-124080321:-|nuORF	ENST00000505686.5_1_5:124080234-124080321:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7369079589844	2	416.73742	831.460287	-0.50287	-0.00020956	-0.6375	-0.00026567	-1.1404	-0.00047524	416.73707926585416	38.454	0.98293	38.977	38.513	39.496	0.52235					52	23	3	0	0	0	0.9159	1	3177	3177		44.531	14.027	1	1833100			9341	12928	6559	6567	10774	10774					0.037815504171248904
FPRSAALA	8	Unmodified	_FPRSAALA_					0	0	0		ENST00000505686.5_1_5:124080234-124080321:-|nuORF	ENST00000505686.5_1_5:124080234-124080321:-|nuORF	ENST00000505686.5_1_5:124080234-124080321:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	416.73742	831.460287	-1.3137	-0.00054747	4.7575	0.0019826	3.4438	0.0014351	416.7379772592382	39.4	0.32925	39.353	39.118	39.447	-0.047001	0.25157	0.0033217	NaN	44.531	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25693			9342	12928	6559	6567							0.037815504171248904
FPRSQQAQP	9	Unmodified	_FPRSQQAQP_					0	0	0			REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.7506103515625	2	529.772522	1057.53049	0.016412	8.6949E-06	-3.2887	-0.0017423	-3.2723	-0.0017336	529.7703457991925	67.33	0.82368	67.294	66.922	67.746	-0.03569					74	35	3	0	0	0	0.38563	1	6419	6419		58.782	3.2778	1	334600	+		9343	30308	6560	6568	10775	10775					0.004028040149478329
FPSAGLHLSS	10	Unmodified	_FPSAGLHLSS_					0	0	0		ENST00000463846.5_1_1:44461379-44461848:+|nuORF	ENST00000463846.5_1_1:44461379-44461848:+|nuORF	ENST00000463846.5_1_1:44461379-44461848:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.260986328125	2	508.263999	1014.51345	0.36841	0.00018725	-4.4401	-0.0022567	-4.0717	-0.0020695	508.2616008641019	29.269	0.44242	29.3	29.101	29.544	0.030945					22	14	3	0	0	0	0.8608	1	1439	1439		34.173	2.2177	1	37815			9344	12078	6561	6569	10776	10776					0.006768834091303688
FPSEALMVSK	10	Unmodified	_FPSEALMVSK_					0	0	0			REV__ENST00000392975.6_1_17:61510656-61510767:-|nuORF	REV__ENST00000392975.6_1_17:61510656-61510767:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7904663085938	2	554.788992	1107.56343	0.66112	0.00036678	-3.9407	-0.0021862	-3.2796	-0.0018195	554.7867054478468	51.121	2.0515	51.873	51.202	53.253	0.75174					120	49	3	0	0	0	0.73395	1	5175	5175		42.864	0.46813	1	3213200	+		9345	26039	6562	6570	10777	10777					0.013952500227787823
FPSLDPNNNY	10	Unmodified	_FPSLDPNNNY_					0	0	0		nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4;ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-2|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.7674560546875	2	590.767103	1179.51965	-0.050007	-2.9542E-05	0.12657	7.4772E-05	0.076561	4.523E-05	590.7669689449548	53.54	0.46074	53.515	53.272	53.732	-0.02475					26	10	3	0	0	0	0.37206	1	4794	4794		66.429	3.123	1	174010			9346	8020	6563	6571	10778	10778					-0.06292643150004551
FPSPLSLPPA	10	Unmodified	_FPSPLSLPPA_					0	0	0			REV__ENST00000370196.10_2_10:102891054-102891231:+|nuORF	REV__ENST00000370196.10_2_10:102891054-102891231:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.360107421875	2	513.286943	1024.55933	-0.051862	-2.662E-05	0.23374	0.00011997	0.18187	9.3353E-05	513.2871083651095	75.106	0.3914	75.152	75.009	75.401	0.045952					15	11	2	0	0	0	0.37624	1	7191	7191		35.618	5.3006	1	27166	+		9347	25642	6564	6572	10779	10779					0.04803528591401118
FPSSFTENCEL	11	Unmodified	_FPSSFTENCEL_					0	0	0		ENSG00000009413|ENST00000368802|REV3L;nc|ENSG00000009413|O60673-2|REV3L	ENSG00000009413|ENST00000368802|REV3L	ENSG00000009413|ENST00000368802|REV3L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	637.2730712890625	2	637.273903	1272.53325	-0.35274	-0.00022479	2.8387	0.001809	2.486	0.0015842	637.2757632523374	83.318	0.88019	83.749	83.414	84.294	0.43108					50	20	4	0	0	0	0.66929	1	9664	9664		36.447	1.2947	1	1275500			9348	754	6565	6573	10780	10780					-0.09211153433034269
FPSSWDYSF	9	Unmodified	_FPSSWDYSF_					0	0	0		chr12:6499354-6509717|13|11.15|0.09|6.96|+|1|TE_info:AluSc8,AluSc8_dup14303,Alu,SINE,donor,-,6499200,6499354|None,NCAPD2|2	chr12:6499354-6509717|13|11.15|0.09|6.96|+|1|TE_info:AluSc8,AluSc8_dup14303,Alu,SINE,donor,-,6499200,6499354|None,NCAPD2|2	chr12:6499354-6509717|13|11.15|0.09|6.96|+|1|TE_info:AluSc8,AluSc8_dup14303,Alu,SINE,donor,-,6499200,6499354|None,NCAPD2|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.8040771484375	2	568.24019	1134.46583	1.1752	0.00066777	-1.1334	-0.00064403	0.041783	2.3743E-05	568.2395169348146	55.633	0.77428	56.201	55.658	56.432	0.56836					24	18	2	0	0	0	0.20789	1	5758	5758		23.042	0	1	169250			9349	138	6566	6574	10781	10781					-0.09602815581706636
FPSVSSLIM	9	Unmodified	_FPSVSSLIM_					0	0	0		ENST00000547738.5_1_11:126870732-126870900:-|nuORF	ENST00000547738.5_1_11:126870732-126870900:-|nuORF	ENST00000547738.5_1_11:126870732-126870900:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.7082824707031	2	490.759704	979.504854	0.42756	0.00020983	3.8881	0.0019081	4.3156	0.0021179	490.76120121829496	28.049	0.29185	28.085	27.931	28.223	0.03607					19	10	2	0	0	0	0.20789	1	1305	1305		35.618	19.145	1	28403			9350	13614	6567	6575	10782	10782					0.01428193448316506
FPTIKQMLR	9	Unmodified	_FPTIKQMLR_					0	0	0			REV__ENST00000345080.4_3_6:105405006-105406105:+|nuORF	REV__ENST00000345080.4_3_6:105405006-105406105:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.33056640625	2	567.328619	1132.64269	0.79571	0.00045143	1.1706	0.0006641	1.9663	0.0011155	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.76764	1	9645	9645		34.173	2.6427	1	18145000	+		9351	25312	6568	6576	10783	10783					0.08166941767581193
FPTLKYFK	8	Unmodified	_FPTLKYFK_					0	0	0		ENSG00000065485|ENST00000316218|PDIA5;ENST00000467157.1_1_3:122864388-122880365:+|nuORF	ENSG00000065485|ENST00000316218|PDIA5	ENSG00000065485|ENST00000316218|PDIA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.3027954101562	2	522.299853	1042.58515	0.44313	0.00023145	3.721	0.0019435	4.1641	0.0021749	522.3012478137563	78.978	0.89196	79.388	79.142	80.034	0.41059					39	20	3	0	0	0	0.89494	1	9054	9054		37.159	1.5408	1	447680			9352	1129	6569	6577	10784	10784					0.06556422833659781
FPTLKYFK	8	Unmodified	_FPTLKYFK_					0	0	0		ENSG00000065485|ENST00000316218|PDIA5;ENST00000467157.1_1_3:122864388-122880365:+|nuORF	ENSG00000065485|ENST00000316218|PDIA5	ENSG00000065485|ENST00000316218|PDIA5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	522.299853	1042.58515	0.024788	1.2947E-05	4.9278	0.0025738	4.9526	0.0025867	522.3021221786066	78.854	0.63599	79.41	79.156	79.792	0.55614	0.011034	0.00020703	NaN	37.159	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	422470			9353	1129	6569	6577							0.06556422833659781
FPTLWALLLS	10	Unmodified	_FPTLWALLLS_					0	0	0		ENST00000479722.1_1_10:101373360-101379897:-|nuORF	ENST00000479722.1_1_10:101373360-101379897:-|nuORF	ENST00000479722.1_1_10:101373360-101379897:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.84033203125	2	580.839342	1159.66413	-0.90693	-0.00052678	2.9394	0.0017073	2.0324	0.0011805	580.8407767096548	69.755	0.8518	69.79	69.548	70.399	0.035622					124	41	4	0	0	0	0.77314	1	6674	6674		40.778	6.8565	1	14836000			9354	12418	6570	6578	10785	10785					0.09068650067933959
FPTTKTYFP	9	Unmodified	_FPTTKTYFP_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.2850341796875	2	551.2844	1100.55425	-0.64318	-0.00035458	0.2278	0.00012558	-0.41538	-0.00022899	551.2844574783772	60.788	1.1006	60.775	60.038	61.139	-0.012203					50	33	2	0	0	0	0.68711	1	5634	5634		41.427	0.64845	1	132100		+	9355	7934;579	6571	6579	10786	10786					0.007992247287575083
FPTTKTYFP	9	Unmodified	_FPTTKTYFP_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.284912109375	2	551.2844	1100.55425	-0.54371	-0.00029974	-0.31436	-0.0001733	-0.85807	-0.00047304	551.2841438551218	60.462	1.0039	60.493	59.99	60.994	0.0312					66	29	3	0	0	0	0.38563	1	5655	5655		58.782	0	1	112160		+	9356	7934;579	6571	6579	10787	10787					0.007992247287575083
FPTTKTYFPH	10	Unmodified	_FPTTKTYFPH_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8126220703125	2	619.813856	1237.61316	-0.1537	-9.5268E-05	0.052681	3.2652E-05	-0.10102	-6.2615E-05	619.8137570070309	49.479	0.82004	49.476	49.092	49.912	-0.0030327					28	18	2	0	0	0	0.67689	2	4132	4132;4151		58.23	18.977	1	134880		+	9357	7934;579	6572	6580	10788;10789	10788					0.0038570102308312926
FPTTKTYFPH	10	Unmodified	_FPTTKTYFPH_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.813720703125	2	619.813856	1237.61316	-0.25487	-0.00015797	-0.027403	-1.6985E-05	-0.28228	-0.00017496	619.8137447170874	49.584	0.84084	49.588	49.191	50.032	0.0035973					30	18	2	0	0	0	0.44744	1	4183	4183		47.96	0	1	156190		+	9358	7934;579	6572	6580	10790	10790					0.0038570102308312926
FPTTKVTI	8	Unmodified	_FPTTKVTI_					0	0	0		ENSG00000183090|ENST00000329798|FREM3	ENSG00000183090|ENST00000329798|FREM3	ENSG00000183090|ENST00000329798|FREM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.7679748535156	2	453.768386	905.522219	0.022881	1.0383E-05	-0.31953	-0.00014499	-0.29665	-0.00013461	453.7681013564252	49.309	0.90843	49.306	49.004	49.912	-0.0030327					36	20	2	0	0	0	0.90523	1	4131	4131		40.778	1.972	1	137280			9359	7500	6573	6581	10791	10791					0.06567857045627079
FPVAGGVLPR	10	Unmodified	_FPVAGGVLPR_					0	0	0			REV__ENST00000356860.7_1_7:81978947-82072764:-|nuORF	REV__ENST00000356860.7_1_7:81978947-82072764:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	507.302734375	2	506.800552	1011.58655	-0.49867	-0.00025273	1.4784	0.00074926	0.97973	0.00049653	506.80125930962566	45.611	0.78478	45.623	45.395	46.179	0.012058					40	21	2	0	0	0	0.86589	1	3265	3265		29.15	3.6994	1	207840	+		9360	25396	6574	6582	10792	10792					0.08122056922422871
FPVDGYLKRL	10	Unmodified	_FPVDGYLKRL_					0	0	0			REV__ENSG00000047230|ENST00000359276|CTPS2	REV__ENSG00000047230|ENST00000359276|CTPS2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2467041015625	3	403.232641	1206.67609	2.7173	0.0010957	0.53858	0.00021717	3.2558	0.0013129	403.23279468551993	104.88	1.9132	104.84	104.06	105.97	-0.040382					56	45	2	0	0	0	0.37624	1	11535	11535		20.03	0	1	120380	+		9361	16348	6575	6583	10793	10793					0.08102266811124537
FPVDKLATV	9	Unmodified	_FPVDKLATV_					0	0	0			REV__nc|ENSG00000177426|Q15583|TGIF1	REV__nc|ENSG00000177426|Q15583|TGIF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	495.2906494140625	2	495.286943	988.559333	-0.95112	-0.00047108	-0.50918	-0.00025219	-1.4603	-0.00072327	495.2865824933829	68.802	0.5366	68.868	68.695	69.231	0.065514					40	23	3	0	0	0	0.76255	1	6191	6191		35.618	1.4457	1	123900	+		9362	30056	6576	6584	10794	10794					0.06459528591381059
FPVDLRLPPVV	11	Unmodified	_FPVDLRLPPVV_					0	0	0		nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;ENSG00000196535|ENST00000527372|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.92236328125	3	417.920174	1250.73869	2.7179	0.0011359	2.3496	0.00098195	5.0675	0.0021178	417.9211507262476	105.91	2.7799	105.88	105.06	107.84	-0.03714					241	65	4	0	0	0	0.75921	1	11626	11626		12.957	0	1	23169000			9363	8070	6577	6585	10795	10795					0.12335412879292562
FPVDNLRA	8	Unmodified	_FPVDNLRA_					0	0	0		nc|ENSG00000161542|Q14558|PRPSAP1;ENSG00000161542|ENST00000446526|PRPSAP1	nc|ENSG00000161542|Q14558|PRPSAP1	nc|ENSG00000161542|Q14558|PRPSAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2530822753906	2	466.253434	930.492316	-1.4677	-0.00068433	2.1004	0.00097932	0.63267	0.00029498	466.2543190866504	60.961	1.1333	60.992	59.95	61.083	0.0312					73	35	3	0	0	0	0.86791	1	5653	5653		28.254	0	1	265390			9364	5639	6578	6586	10796	10796					0.024289181002814075
FPVDTYEYSS	10	Unmodified	_FPVDTYEYSS_					0	0	0			REV__ENSG00000105088|ENST00000264833|OLFM2	REV__ENSG00000105088|ENST00000264833|OLFM2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.366455078125	2	604.261319	1206.50808	-1.2756	-0.0007708	1.0958	0.00066218	-0.17977	-0.00010863	604.2621799871655	104.79	0.23999	104.89	104.71	104.95	0.093857					6	5	2	0	0	0	0.37624	1	11072	11072		40.778	15.204	1	63638	+		9365	17505	6579	6587	10797	10797					-0.08690884963971257
FPVEIKSFY	9	Unmodified	_FPVEIKSFY_					0	0	0		ENST00000589314.1_1_18:55270019-55270151:-|nuORF;ENSG00000134440|ENST00000256854|NARS1	ENST00000589314.1_1_18:55270019-55270151:-|nuORF	ENST00000589314.1_1_18:55270019-55270151:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.301513671875	2	565.30005	1128.58555	-0.42962	-0.00024286	0.61744	0.00034904	0.18782	0.00010618	565.3004501774564	73.658	0.88351	74.046	73.654	74.538	0.3878					35	23	2	0	0	0	0.41984	1	8255	8255		56.434	15.007	1	529330			9366	3934	6580	6588	10798	10798					0.026397977628676017
FPVEIKSFY	9	Unmodified	_FPVEIKSFY_					0	0	0		ENST00000589314.1_1_18:55270019-55270151:-|nuORF;ENSG00000134440|ENST00000256854|NARS1	ENST00000589314.1_1_18:55270019-55270151:-|nuORF	ENST00000589314.1_1_18:55270019-55270151:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	565.30005	1128.58555	0.61929	0.00035009	-0.033495	-1.8935E-05	0.5858	0.00033115	565.3000416229817	73.403	0.85448	73.957	73.639	74.494	0.55386	-0.044409	-0.00028701	NaN	56.434	39	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	568880			9367	3934	6580	6588							0.026397977628676017
FPVFCIFF	8	Unmodified	_FPVFCIFF_					0	0	0			REV__ENSG00000169313|ENST00000302632|P2RY12	REV__ENSG00000169313|ENST00000302632|P2RY12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2751770019531	2	510.2566	1018.49865	-0.21723	-0.00011085	-1.7796	-0.00090806	-1.9969	-0.0010189	510.2556069587001	56.465	0.56841	56.862	56.676	57.244	0.39672					30	12	3	0	0	0	0.4196	1	5830	5830		43.626	10.133	1	668680	+		9368	21570	6581	6589	10799	10799					-0.009862799925599575
FPVFLLSCPPQ	11	Unmodified	_FPVFLLSCPPQ_					0	0	0		ENST00000298125.6_1_13:52334347-52334536:+|nuORF	ENST00000298125.6_1_13:52334347-52334536:+|nuORF	ENST00000298125.6_1_13:52334347-52334536:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	624.3299560546875	2	624.328285	1246.64202	-0.16192	-0.00010109	-3.7355	-0.0023322	-3.8974	-0.0024333	624.3249994673045	63.904	0.85819	64.29	63.962	64.82	0.38681					30	19	2	0	0	0	0.48313	1	6893	6893		53.089	7.1167	1	385050			9369	9770	6582	6590	10800	10800					0.028561023278825814
FPVFPPPGG	9	Unmodified	_FPVFPPPGG_					0	0	0			REV__nc|ENSG00000083544|Q9H7E2-2|TDRD3	REV__nc|ENSG00000083544|Q9H7E2-2|TDRD3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2638244628906	2	457.742171	913.469789	0.57953	0.00026527	1.9547	0.00089474	2.5342	0.00116	457.7433757983403	80.306	1.0747	80.448	80.248	81.323	0.14118					46	30	2	0	0	0	0.20789	1	7706	7706		8.8223	0	1	43840	+		9370	15580	6583	6591	10801	10801					0.00959318702678047
FPVIYDVKY	9	Unmodified	_FPVIYDVKY_					0	0	0		nc|ENSG00000198791|Q9UIV1-2|CNOT7;ENSG00000198791|ENST00000361272|CNOT7	nc|ENSG00000198791|Q9UIV1-2|CNOT7	nc|ENSG00000198791|Q9UIV1-2|CNOT7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.3080444335938	2	572.307875	1142.6012	-0.9022	-0.00051634	1.2119	0.00069358	0.3097	0.00017725	572.308331851772	71.421	0.91285	71.806	71.461	72.374	0.38449					67	21	4	0	0	0	0.017216	5	7939	7928;7939;7950;7963;7977		127.46	65.77	1	1183700			9371	8333	6584	6592	10802;10803;10804;10805;10806	10803					0.0356008427991128
FPVIYDVKY	9	Unmodified	_FPVIYDVKY_					0	0	0		nc|ENSG00000198791|Q9UIV1-2|CNOT7;ENSG00000198791|ENST00000361272|CNOT7	nc|ENSG00000198791|Q9UIV1-2|CNOT7	nc|ENSG00000198791|Q9UIV1-2|CNOT7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.3079833984375	2	572.307875	1142.6012	0.13305	7.6144E-05	-0.010068	-5.7618E-06	0.12298	7.0382E-05	572.3076547136548	71.289	1.0323	71.837	71.408	72.44	0.54756					64	24	4	0	0	0	0.0030376	4	7971	7948;7960;7971;7985		139.97	71.184	1	1324900			9372	8333	6584	6592	10807;10808;10809;10810	10809					0.0356008427991128
FPVLARAAMER	11	Unmodified	_FPVLARAAMER_					0	0	0			REV__nc|ENSG00000115970|Q6YHU6-4|THADA	REV__nc|ENSG00000115970|Q6YHU6-4|THADA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.849609375	2	630.847707	1259.68086	1.4392	0.00090789	1.2364	0.00077999	2.6756	0.0016879	630.8483297222848	110.34	1.0207	110.45	110.27	111.29	0.11659					74	37	4	0	0	0	0.61369	1	11899	11899		42.864	5.0528	1	1648400	+		9373	18166	6585	6593	10811	10811					0.06140827682247618
FPVLGPFKYA	10	Unmodified	_FPVLGPFKYA_					0	0	0		ENST00000513452.5_2_3:98240263-98241442:-|nuORF	ENST00000513452.5_2_3:98240263-98241442:-|nuORF	ENST00000513452.5_2_3:98240263-98241442:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.2735595703125	2	569.81841	1137.62227	0.024855	1.4163E-05	-2.7802	-0.0015842	-2.7553	-0.00157	569.816927970035	58.162	0.8022	58.132	57.767	58.569	-0.029865					29	20	2	0	0	0	0.37624	1	5443	5443		29.15	15.012	1	57902			9374	13051	6586	6594	10812	10812					0.058960943794318155
FPVLIGIG	8	Unmodified	_FPVLIGIG_					0	0	0			REV__nc|ENSG00000189091|Q15393-3|SF3B3	REV__nc|ENSG00000189091|Q15393-3|SF3B3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.7393798828125	2	408.254914	814.495276	-1.931	-0.00078832	0.49945	0.0002039	-1.4315	-0.00058442	408.2549891137188	36.656	0.52909	36.656	36.293	36.822	0					17	11	2	0	0	0	0.4196	1	2110	2110		24.504	7.799	1	40990	+		9375	23064	6587	6595	10813	10813					0.08060793225092766
FPVLIGIG	8	Unmodified	_FPVLIGIG_					0	0	0			REV__nc|ENSG00000189091|Q15393-3|SF3B3	REV__nc|ENSG00000189091|Q15393-3|SF3B3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	408.254914	814.495276	-0.94189	-0.00038453	-2.3525	-0.00096043	-3.2944	-0.001345	408.25430643718704	36.746	0.57932	36.692	36.426	37.005	-0.053558	0.043151	-0.0016103	NaN	24.504	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29464	+		9376	23064	6587	6595							0.08060793225092766
FPVLVDPS	8	Unmodified	_FPVLVDPS_					0	0	0		ENST00000547487.5_1_12:56235002-56236716:-|nuORF	ENST00000547487.5_1_12:56235002-56236716:-|nuORF	ENST00000547487.5_1_12:56235002-56236716:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2676696777344	2	437.239461	872.46437	-0.099597	-4.3548E-05	-3.4182	-0.0014946	-3.5178	-0.0015381	437.23799227039774	51.141	0.37393	51.576	51.285	51.659	0.43505					14	8	2	0	0	0	0.4196	1	5057	5057		18.324	3.4595	1	193230			9377	13609	6588	6596	10814	10814					0.023035951201904936
FPVMCNLIF	9	Unmodified	_FPVMCNLIF_					0	0	0			REV__ENSG00000169676|ENST00000304374|DRD5	REV__ENSG00000169676|ENST00000304374|DRD5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.283935546875	2	542.271924	1082.52929	-0.32574	-0.00017664	-0.93099	-0.00050485	-1.2567	-0.00068149	542.2713939045941	74.099	0.59312	74.658	74.369	74.962	0.55891					25	13	3	0	0	0	0.20789	1	8405	8405		71.378	0	1	250420	+		9378	21591	6589	6597	10815	10815					-0.008668696698123313
FPVPKPIDY	9	Unmodified	_FPVPKPIDY_					0	0	0		ENSG00000058729|ENST00000283109|RIOK2;nc|ENSG00000058729|Q9BVS4-2|RIOK2	ENSG00000058729|ENST00000283109|RIOK2	ENSG00000058729|ENST00000283109|RIOK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.2955322265625	2	538.294768	1074.57498	-1.0308	-0.00055486	1.144	0.00061581	0.11323	6.0951E-05	538.2953579244206	62.901	1.1673	63.289	62.795	63.963	0.3878					70	26	4	0	0	0	0.18601	4	6750	6750;6773;6784;6798		76.774	16.025	1	423310			9379	1047	6590	6598	10816;10817;10818;10819	10816					0.04067815108442119
FPVPKPIDY	9	Unmodified	_FPVPKPIDY_					0	0	0		ENSG00000058729|ENST00000283109|RIOK2;nc|ENSG00000058729|Q9BVS4-2|RIOK2	ENSG00000058729|ENST00000283109|RIOK2	ENSG00000058729|ENST00000283109|RIOK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.296142578125	2	538.294768	1074.57498	-0.33111	-0.00017823	0.59883	0.00032234	0.26772	0.00014411	538.2950923314316	62.814	1.1395	63.368	62.907	64.046	0.55449					67	26	4	0	0	0	0.26953	1	6779	6779		67.494	12.717	1	394730			9380	1047	6590	6598	10820	10820					0.04067815108442119
FPVQAGAGG	9	Unmodified	_FPVQAGAGG_					0	0	0		ENST00000315150.9_1_3:128813878-128840609:-|nuORF	ENST00000315150.9_1_3:128813878-128840609:-|nuORF	ENST00000315150.9_1_3:128813878-128840609:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.2054748535156	2	402.205953	802.397353	-0.18632	-7.4938E-05	-0.51168	-0.0002058	-0.698	-0.00028074	402.20569515988933	98.659	2.0984	98.708	97.873	99.972	0.04982					129	48	4	0	0	0	0.67235	1	10468	10468		42.474	7.2737	1	1555200			9381	9970	6591	6599	10821	10821					-0.011750153708931066
FPVQAGAGG	9	Unmodified	_FPVQAGAGG_					0	0	0		ENST00000315150.9_1_3:128813878-128840609:-|nuORF	ENST00000315150.9_1_3:128813878-128840609:-|nuORF	ENST00000315150.9_1_3:128813878-128840609:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.20562744140625	2	402.205953	802.397353	2.2889	0.00092062	-2.9581	-0.0011898	-0.66913	-0.00026913	402.20469632638094	98.499	3.236	98.444	96.673	99.909	-0.054817					141	75	3	0	0	0	0.76402	2	10648	10648;10685		35.201	2.3883	1	1723900			9382	9970	6591	6599	10822;10823	10822					-0.011750153708931066
FPVQAGAGG	9	Unmodified	_FPVQAGAGG_					0	0	0		ENST00000315150.9_1_3:128813878-128840609:-|nuORF	ENST00000315150.9_1_3:128813878-128840609:-|nuORF	ENST00000315150.9_1_3:128813878-128840609:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.2046813964844	2	402.205953	802.397353	3.1805	0.0012792	-3.8193	-0.0015361	-0.63874	-0.00025691	402.20435516833464	98.401	2.1792	98.45	97.455	99.634	0.048157					140	50	4	0	0	0	0.76402	1	10567	10567		35.201	6.9464	1	1692900			9383	9970	6591	6599	10824	10824					-0.011750153708931066
FPWEVPKKLKY	11	Unmodified	_FPWEVPKKLKY_					0	0	0		ENSG00000168906|ENST00000306434|MAT2A;ENST00000477975.2_1_3:112415757-112416508:-|nuORF	ENSG00000168906|ENST00000306434|MAT2A	ENSG00000168906|ENST00000306434|MAT2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.94281005859375	3	478.942979	1433.80711	0.093946	4.4995E-05	-0.20338	-9.7407E-05	-0.10943	-5.2413E-05	478.94276196343424	56.703	1.1831	57.099	56.676	57.859	0.39672					85	27	5	0	0	0	0.00076288	6	5869	5835;5845;5857;5869;5881;5893		123.21	75.512	1	3551400			9384	6447	6592	6600	10825;10826;10827;10828;10829;10830	10828					0.10755657459185386
FPWEVPKKLKY	11	Unmodified	_FPWEVPKKLKY_					0	0	0		ENSG00000168906|ENST00000306434|MAT2A;ENST00000477975.2_1_3:112415757-112416508:-|nuORF	ENSG00000168906|ENST00000306434|MAT2A	ENSG00000168906|ENST00000306434|MAT2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.9429016113281	3	478.942979	1433.80711	-0.31928	-0.00015292	0.21066	0.0001009	-0.10862	-5.2024E-05	478.9429989845526	56.555	1.2289	57.115	56.703	57.932	0.55954					84	28	5	0	0	0	0.00077091	5	5863	5839;5851;5863;5875;5887		122.94	72.148	1	4036400			9385	6447	6592	6600	10831;10832;10833;10834;10835	10833					0.10755657459185386
FPWKVHLPM	9	Oxidation (M)	_FPWKVHLPM(Oxidation (M))_		FPWKVHLPM(1)		FPWKVHLPM(60)	0	0	1			REV__nc|ENSG00000102125|Q16635-7|TAFAZZIN	REV__nc|ENSG00000102125|Q16635-7|TAFAZZIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.816650390625	2	585.810062	1169.60557	1.7079	0.0010005	4.2393	0.0024834	5.9472	0.0034839	585.8124744284027	99.501	1.3813	99.864	99.37	100.75	0.36292					85	34	3	0	0	0	0.3636	1	12076	12076		60.294	10.852	1	650750	+		9386	17326	6593	6601	10836	10836		249			0.027552702218144987
FPWQWMNLEM	10	Oxidation (M)	_FPWQWM(Oxidation (M))NLEM_		FPWQWM(0.998)NLEM(0.002)		FPWQWM(28)NLEM(-28)	0	0	1			REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.53997802734375	3	466.538748	1396.59441	-0.20705	-9.6597E-05	0.64932	0.00030294	0.44227	0.00020634	466.53930586029725	30.685	1.4681	30.689	30.316	31.784	0.0037212					100	33	6	0	0	0	0.51401	1	2018	2018		54.722	20.636	2	11503000	+		9387	28939	6594	6602	10837	10837		427			-0.08801919934626312
FPYILLLFA	9	Unmodified	_FPYILLLFA_					0	0	0		nc|ENSG00000110218|Q96RD7-2|PANX1;ENSG00000110218|ENST00000227638|PANX1	nc|ENSG00000110218|Q96RD7-2|PANX1	nc|ENSG00000110218|Q96RD7-2|PANX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3267211914062	2	548.825704	1095.63685	0.33547	0.00018412	0.44445	0.00024392	0.77992	0.00042804	549.3281544478277	37.668	0.23466	37.61	37.439	37.673	-0.057915					10	7	2	0	0	0	0.7932	1	2175	2175		21.702	0	1	45730			9388	2515	6595	6603	10838	10838					0.0928616652756773
FPYILLLFA	9	Unmodified	_FPYILLLFA_					0	0	0		nc|ENSG00000110218|Q96RD7-2|PANX1;ENSG00000110218|ENST00000227638|PANX1	nc|ENSG00000110218|Q96RD7-2|PANX1	nc|ENSG00000110218|Q96RD7-2|PANX1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	548.825704	1095.63685	0.68093	0.00037371	-0.63819	-0.00035026	0.042737	2.3455E-05	548.827249436424	37.155	0.16922	37.641	37.492	37.662	0.48581	0.015539	-2.952E-05	NaN	21.702	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36423			9389	2515	6595	6603							0.0928616652756773
FQAPTAKEM	9	Unmodified	_FQAPTAKEM_					0	0	0		ENST00000418251.6_1_2:113943320-113958989:+|nuORF;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;nc|ENSG00000125637|Q8NDX1-2|PSD4;ENSG00000125637|ENST00000245796|PSD4	ENST00000418251.6_1_2:113943320-113958989:+|nuORF	ENST00000418251.6_1_2:113943320-113958989:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.7518615722656	2	511.75241	1021.49027	-1.566	-0.0008014	0.55605	0.00028456	-1.0099	-0.00051684	511.75250937867264	42.119	0.58621	42.533	42.237	42.823	0.4139					29	14	3	0	0	0	0.15708	2	3743	3731;3743		82.75	17.285	1	785980			9390	3401	6596	6604	10839;10840	10840					-0.01961878699830777
FQAPTAKEM	9	Unmodified	_FQAPTAKEM_					0	0	0		ENST00000418251.6_1_2:113943320-113958989:+|nuORF;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;nc|ENSG00000125637|Q8NDX1-2|PSD4;ENSG00000125637|ENST00000245796|PSD4	ENST00000418251.6_1_2:113943320-113958989:+|nuORF	ENST00000418251.6_1_2:113943320-113958989:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.75042724609375	2	511.75241	1021.49027	-1.2284	-0.00062866	0.14906	7.6281E-05	-1.0794	-0.00055238	511.7523872446756	41.952	0.54689	42.618	42.312	42.859	0.66558					26	13	3	0	0	0	0.059135	1	3713	3713		104.06	23.602	1	801160			9391	3401	6596	6604	10841	10841					-0.01961878699830777
FQEKGYNKELR	11	Unmodified	_FQEKGYNKELR_					0	0	0		nc|ENSG00000135902|Q07001-2|CHRND;ENSG00000135902|ENST00000258385|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.2498474121094	3	471.249131	1410.72556	0.17104	8.0604E-05	1.8047	0.00085044	1.9757	0.00093105	471.25021162108527	31.295	0.53934	31.313	31	31.539	0.01836					18	12	2	0	0	0	0.72374	1	1683	1683		27.644	0	1	49850			9392	4060	6597	6605	10842	10842					0.03662930029281597
FQGFNQFKSAI	11	Unmodified	_FQGFNQFKSAI_					0	0	0			REV__ENSG00000138336|ENST00000373644|TET1	REV__ENSG00000138336|ENST00000373644|TET1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	643.8324584960938	2	643.830037	1285.64552	2.1668	0.0013951	2.881	0.0018548	5.0478	0.0032499	643.8317121852348	49.723	0.57901	50.568	50.272	50.851	0.84501					28	13	3	0	0	0	0.62614	1	4888	4888		41.427	0	1	818280	+		9393	19458	6598	6606	10843	10843					0.014124884261036641
FQHLVGRSKYL	11	Unmodified	_FQHLVGRSKYL_					0	0	0			REV__ENSG00000162433|ENST00000327299|AK4	REV__ENSG00000162433|ENST00000327299|AK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.9220275878906	3	449.922578	1346.7459	-0.26175	-0.00011777	-0.4684	-0.00021074	-0.73014	-0.00032851	449.92232286690125	24.59	0.99138	24.262	23.98	24.972	-0.32825					43	21	3	0	0	0	0.69071	1	1206	1206		33.039	3.8693	1	274300	+		9394	20814	6599	6607	10844	10844					0.08640145479785133
FQHLVGRSKYL	11	Unmodified	_FQHLVGRSKYL_					0	0	0			REV__ENSG00000162433|ENST00000327299|AK4	REV__ENSG00000162433|ENST00000327299|AK4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	449.922578	1346.7459	-0.26175	-0.00011777	-0.4684	-0.00021074	-0.73014	-0.00032851	449.92232286690125	24.59	0.99138	24.262	23.98	24.972	-0.32825	0.13543	0.0014241	NaN	33.039	43	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	274300	+		9395	20814	6599	6607							0.08640145479785133
FQILRLARLFR	11	Unmodified	_FQILRLARLFR_					0	0	0			REV__nc|ENSG00000156113|Q12791-5|KCNMA1	REV__nc|ENSG00000156113|Q12791-5|KCNMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.63702392578125	3	478.301501	1431.88267	-0.48825	-0.00023353	3.4745	0.0016619	2.9863	0.0014283	478.30300632886104	67.214	1.2093	67.178	66.747	67.957	-0.035698					104	51	3	0	0	0	0.80813	1	6427	6427		9.6461	0.43434	1	289200	+		9396	20470	6600	6608	10845	10845					0.18400679430101263
FQIWTWLVEAQ	11	Unmodified	_FQIWTWLVEAQ_					0	0	0		ENST00000273047.8_1_3:19988696-19992457:+|nuORF	ENST00000273047.8_1_3:19988696-19992457:+|nuORF	ENST00000273047.8_1_3:19988696-19992457:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	474.2514953613281	3	474.246839	1419.71869	0.38786	0.00018394	1.9097	0.00090566	2.2975	0.0010896	474.2478013564301	28.226	0.59696	28.262	28.021	28.618	0.03607					44	20	3	0	0	0	0.71207	1	1334	1334		29.551	10.584	1	75066			9397	9572	6601	6609	10846	10846					0.02561617148694495
FQKVILRRYKK	11	Unmodified	_FQKVILRRYKK_					0	0	0		ENSG00000229676|ENST00000456783|ZNF492;ENST00000311237.4_19:20578692-20592633:-|nuORF	ENSG00000229676|ENST00000456783|ZNF492	ENSG00000229676|ENST00000456783|ZNF492	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.6484375	3	493.648789	1477.92454	-1.6053	-0.00079248	3.142	0.0015511	1.5367	0.00075858	493.6501931782481	44.56	1.836	44.56	43.623	45.459	0					138	44	4	0	0	0	0.85439	1	3187	3187		5.6988	0.28586	1	434870			9398	8727	6602	6610	10847	10847					0.20469235118639517
FQLFLWIH	8	Unmodified	_FQLFLWIH_					0	0	0		ENST00000338447.10_1_11:63722497-63722614:+|nuORF	ENST00000338447.10_1_11:63722497-63722614:+|nuORF	ENST00000338447.10_1_11:63722497-63722614:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3064575195312	2	552.30547	1102.59639	-0.5921	-0.00032702	2.4691	0.0013637	1.877	0.0010367	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.92176	1	9163	9163		46.766	9.738	1	1102700			9399	10203	6603	6611	10848	10848					0.04919244927805266
FQMNDHWIWEL	11	Unmodified	_FQMNDHWIWEL_					0	0	0			REV__nc|ENSG00000115464|Q70CQ2-3|USP34	REV__nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.25244140625	3	506.899333	1517.67617	1.4062	0.00071279	4.3809	0.0022207	5.787	0.0029334	506.9014684746562	49.43	0.52365	50.275	49.993	50.517	0.845					19	12	2	0	0	0	0.17911	1	4808	4808		18.531	1.3643	1	308100	+		9400	18123	6604	6612	10849	10849					-0.061961012511574154
FQNLPLNIY	9	Unmodified	_FQNLPLNIY_					0	0	0		ENSG00000101236|ENST00000358395|RNF24;nc|ENSG00000101236|Q9Y225-2|RNF24	ENSG00000101236|ENST00000358395|RNF24	ENSG00000101236|ENST00000358395|RNF24	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3112182617188	2	561.303124	1120.5917	-1.0314	-0.0005789	-3.5912	-0.0020158	-4.6226	-0.0025947	561.3010843560567	38.606	0.7316	38.617	38.245	38.976	0.011173					22	16	2	0	0	0	0.20789	1	2631	2631		37.159	10.466	1	42078			9401	1919	6605	6613	10850	10850					0.036223159943801875
FQNPFRSEL	9	Unmodified	_FQNPFRSEL_					0	0	0		ENSG00000073050|ENST00000262887|XRCC1	ENSG00000073050|ENST00000262887|XRCC1	ENSG00000073050|ENST00000262887|XRCC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.2875366210938	2	569.288005	1136.56146	-0.56844	-0.00032361	0.050348	2.8663E-05	-0.51809	-0.00029494	569.2879865045275	63.455	1.7656	63.842	63.054	64.82	0.38709					118	40	4	0	0	0	0.024351	7	6807	6795;6807;6819;6830;6843;6856;6869		122.18	27.028	1	1449100			9402	1286	6606	6614	10851;10852;10853;10854;10855;10856;10857	10852					-0.0013604267080609134
FQNPFRSEL	9	Unmodified	_FQNPFRSEL_					0	0	0		ENSG00000073050|ENST00000262887|XRCC1	ENSG00000073050|ENST00000262887|XRCC1	ENSG00000073050|ENST00000262887|XRCC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.287353515625	2	569.288005	1136.56146	0.95985	0.00054643	-1.525	-0.00086817	-0.56515	-0.00032173	569.28709669555	63.283	1.5633	63.837	63.166	64.729	0.5545					109	36	4	0	0	0	0.024351	7	6833	6790;6800;6811;6822;6833;6847;6860		122.18	31.399	1	1326500			9403	1286	6606	6614	10858;10859;10860;10861;10862;10863;10864	10862					-0.0013604267080609134
FQNRRAKFRKQ	11	Unmodified	_FQNRRAKFRKQ_					0	0	0		ENSG00000165462|ENST00000298231|PHOX2A;ENSG00000109132|ENST00000226382|PHOX2B	ENSG00000165462|ENST00000298231|PHOX2A	ENSG00000165462|ENST00000298231|PHOX2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.9550476074219	3	493.619892	1477.83785	-1.8007	-0.00088885	4.0862	0.002017	2.2855	0.0011282	493.6218802691259	31.167	0.9176	31.167	30.72	31.638	0					75	31	3	0	0	0	0.74022	1	1455	1455		24.232	4.2013	1	50794			9404	2450	6607	6615	10865	10865					0.11804248616772384
FQPGLPANS	9	Unmodified	_FQPGLPANS_					0	0	0			REV__ENSG00000077498|ENST00000263321|TYR	REV__ENSG00000077498|ENST00000263321|TYR	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7396240234375	2	465.737617	929.460681	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.543	1	74.675	74.175	75.175	0.13208								0	0	0	0.29796	1	6899	6899		31.53	1.6883	1		+		9405	16749	6608	6616	10866	10866					-0.006870746536719707
FQPPREKLHLC	11	Unmodified	_FQPPREKLHLC_					0	0	0		nc|ENSG00000103852|Q5W5X9-2|TTC23;nc|ENSG00000103852|Q5W5X9-3|TTC23;ENSG00000103852|ENST00000394132|TTC23	nc|ENSG00000103852|Q5W5X9-2|TTC23	nc|ENSG00000103852|Q5W5X9-2|TTC23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.5807189941406	3	456.579935	1366.71798	0.11037	5.0391E-05	1.4918	0.00068111	1.6021	0.0007315	456.58050150745834	18.713	0.50433	18.092	17.905	18.409	-0.62141					28	11	4	0	0	0	0.73647	1	428	428		25.068	0	1	344920			9406	2101	6609	6617	10867	10867					0.049284992280263396
FQPRAPGK	8	Unmodified	_FQPRAPGK_					0	0	0		ENST00000473619.5_1_6:32148953-32150088:-|nuORF	ENST00000473619.5_1_6:32148953-32150088:-|nuORF	ENST00000473619.5_1_6:32148953-32150088:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.75506591796875	2	450.756144	899.497735	-1.5537	-0.00070033	-2.7815	-0.0012538	-4.3352	-0.0019541	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.87922	1	7731	7731		31.955	2.1133	1	298090			9407	12287	6610	6618	10868	10868					0.043966416827515786
FQPVLSLQL	9	Unmodified	_FQPVLSLQL_					0	0	0			REV__ENST00000300853.7_1_19:45912690-45912933:-|nuORF	REV__ENST00000300853.7_1_19:45912690-45912933:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7888793945312	2	522.808042	1043.60153	0.75142	0.00039285	-3.2128	-0.0016797	-2.4614	-0.0012868	522.806034917909	55.527	0.45785	55.928	55.698	56.156	0.40101					14	10	2	0	0	0	0.20789	1	5665	5665		35.618	0	1	153330	+		9408	24757	6611	6619	10869	10869					0.08147503999771288
FQRLKSLEVL	10	Unmodified	_FQRLKSLEVL_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.58416748046875	3	411.583562	1231.72886	1.5828	0.00065145	-0.12338	-5.078E-05	1.4594	0.00060067	411.5834556402397	21.313	1.331	20.869	20.477	21.808	-0.44324					86	30	5	0	0	0	0.86225	1	777	777		32.751	3.1998	1	766690	+		9409	16310	6612	6620	10870	10870					0.12226224873938918
FQRMEKREKKW	11	Unmodified	_FQRMEKREKKW_					0	0	0			REV__nc|ENSG00000111696|Q86UY8-2|NT5DC3	REV__nc|ENSG00000111696|Q86UY8-2|NT5DC3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	522.6182861328125	3	522.61716	1564.82965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.655	1	54.711	54.211	55.211	0.055614								0	0	0	0.56276	1	4531	4531		15.921	1.8346	1		+		9410	29776	6613	6621	10871	10871					0.06982933585140927
FQRVKLTFLL	10	Unmodified	_FQRVKLTFLL_					0	0	0			REV__ENSG00000010017|ENST00000011619|RANBP9	REV__ENSG00000010017|ENST00000011619|RANBP9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	632.3643188476562	2	632.892441	1263.77033	-1.1822	-0.0007482	3.2795	0.0020756	2.0973	0.0013274	633.39686301484	103.03	0.39136	103.14	102.88	103.27	0.11494					14	9	2	0	0	0	0.37624	1	10805	10805		15.642	5.3766	1	468400	+		9411	16155	6614	6622	10872	10872					0.14899405633263996
FQSPLPKPQVI	11	Unmodified	_FQSPLPKPQVI_					0	0	0			REV__ENSG00000137720|ENST00000260276|CFAP68	REV__ENSG00000137720|ENST00000260276|CFAP68	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.6891479492188	2	627.366256	1252.71796	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.877	1	67.936	67.436	68.436	0.059288								0	0	0	0.56276	1	6067	6067		30.318	0	1		+		9412	19402	6615	6623	10873	10873					0.10170822499640053
FQTTLLLKDLV	11	Unmodified	_FQTTLLLKDLV_					0	0	0			REV__nc|ENSG00000135336|Q9UBD5-3|ORC3	REV__nc|ENSG00000135336|Q9UBD5-3|ORC3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.884033203125	2	645.887021	1289.75949	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.86	1	105.93	105.43	106.43	0.073112								0	0	0	0.56276	1	11238	11238		25.574	4.6271	1		+		9413	19210	6616	6624	10874	10874					0.1261995846832633
FQVKKHGG	8	Unmodified	_FQVKKHGG_					0	0	0			REV__ENSG00000152767|ENST00000319562|FARP1	REV__ENSG00000152767|ENST00000319562|FARP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.756591796875	2	450.756144	899.497735	0.36741	0.00016561	-4.3298	-0.0019517	-3.9623	-0.0017861	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.88915	1	8340	8340		35.201	0	1	394230	+		9414	20315	6617	6625	10875	10875					0.04396641682762947
FQVSGKKKKG	10	Unmodified	_FQVSGKKKKG_					0	0	0			REV__ENST00000602683.5_1_1:32374501-32377335:-|nuORF	REV__ENST00000602683.5_1_1:32374501-32377335:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.2765502929688	2	553.837665	1105.66078	-0.3099	-0.00017164	4.4143	0.0024448	4.1044	0.0022732	553.8397910972325	64.102	0.56231	64.129	63.91	64.473	0.027145					24	15	2	0	0	0	0.37624	1	6013	6013		63.534	17.562	1	42760	+		9415	29333	6618	6626	10876	10876					0.11217400013947554
FQWKFIPERKL	11	Unmodified	_FQWKFIPERKL_					0	0	0		nc|ENSG00000165521|Q05BV3|EML5;ENSG00000165521|ENST00000554922|EML5;nc|ENSG00000165521|Q05BV3-4|EML5;nc|ENSG00000165521|Q05BV3-2|EML5	nc|ENSG00000165521|Q05BV3|EML5	nc|ENSG00000165521|Q05BV3|EML5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.2851257324219	3	497.953878	1490.8398	-1.8811	-0.00093669	-3.5991	-0.0017922	-5.4801	-0.0027289	497.95200362159926	24.056	0.79183	24.056	23.674	24.466	0					97	33	4	0	0	0	0.75121	1	770	770		21.78	7.6944	1	192870			9416	6090	6619	6627	10877	10877					0.1140186458203516
FQWKRLAPL	9	Unmodified	_FQWKRLAPL_					0	0	0		ENSG00000162873|ENST00000367155|KLHDC8A	ENSG00000162873|ENST00000367155|KLHDC8A	ENSG00000162873|ENST00000367155|KLHDC8A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	579.844482421875	2	579.842751	1157.67095	0.88069	0.00051066	1.3557	0.00078609	2.2364	0.0012968	579.843435527032	102.18	1.0887	102.31	101.93	103.02	0.13523					81	26	4	0	0	0	0.77546	1	10808	10808		31.955	10.269	1	2076300			9417	5742	6620	6628	10878	10878					0.09842007739166547
FQYWKRFDLRR	11	Unmodified	_FQYWKRFDLRR_					0	0	0		ENSG00000111249|ENST00000261726|CUX2	ENSG00000111249|ENST00000261726|CUX2	ENSG00000111249|ENST00000261726|CUX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.2933349609375	3	538.959915	1613.85791	0.37755	0.00020348	-1.2812	-0.00069053	-0.90367	-0.00048704	539.2935875791261	22.273	1.2898	21.854	21.518	22.808	-0.41924					49	29	3	0	0	0	0.85439	1	882	882		5.6988	0.28586	1	161640			9418	2562	6621	6629	10879	10879					0.07553999556716917
FQYWKRFDLRR	11	Unmodified	_FQYWKRFDLRR_					0	0	0		ENSG00000111249|ENST00000261726|CUX2	ENSG00000111249|ENST00000261726|CUX2	ENSG00000111249|ENST00000261726|CUX2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	538.959915	1613.85791	-0.27102	-0.00014607	-0.25778	-0.00013893	-0.5288	-0.000285	538.9596062870653	22.299	0.93332	21.688	21.439	22.373	-0.6107	-0.082989	0.00089737	NaN	5.6988	57	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	248200			9419	2562	6621	6629							0.07553999556716917
FRAAAASKGT	10	Unmodified	_FRAAAASKGT_					0	0	0		ENST00000373433.8_1_20:36662020-36662074:+|nuORF	ENST00000373433.8_1_20:36662020-36662074:+|nuORF	ENST00000373433.8_1_20:36662020-36662074:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	490.266845703125	2	490.269616	978.524678	-0.67207	-0.0003295	-1.9797	-0.00097057	-2.6517	-0.0013001	490.26866249477763	83.997	2.9917	84.163	83.319	86.311	0.1651					132	69	2	0	0	0	0.82886	1	8202	8202		37.812	2.6108	1	268130			9420	10745	6622	6630	10880	10880					0.03455705503279205
FRAKTPVL	8	Unmodified	_FRAKTPVL_					0	0	0			REV__ENSG00000115365|ENST00000450366|LANCL1	REV__ENSG00000115365|ENST00000450366|LANCL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.28973388671875	2	466.28982	930.565087	-1.3157	-0.00061351	1.5891	0.00074096	0.27333	0.00012745	466.29039897325373	74.355	0.67729	74.355	74.138	74.815	0					55	29	3	0	0	0	0.9283	1	6713	6713		49.442	1.5259	1	318180	+		9421	18114	6623	6631	10881	10881					0.09702671893705883
FRAKTPVL	8	Unmodified	_FRAKTPVL_					0	0	0			REV__ENSG00000115365|ENST00000450366|LANCL1	REV__ENSG00000115365|ENST00000450366|LANCL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.28961181640625	2	466.28982	930.565087	-1.0457	-0.00048758	1.1245	0.00052435	0.078871	3.6777E-05	466.29021591001344	73.859	1.0735	73.986	73.713	74.787	0.1271					83	42	3	0	0	0	0.87259	1	6818	6818		58.782	0.97068	1	958110	+		9422	18114	6623	6631	10882	10882					0.09702671893705883
FRCLHPLLV	9	Unmodified	_FRCLHPLLV_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.3176879882812	2	549.318054	1096.62156	-0.54475	-0.00029924	-0.14963	-8.2197E-05	-0.69439	-0.00038144	549.3179138519522	101.15	1.9875	101.19	100.7	102.69	0.031036					127	47	4	0	0	0	0.7932	1	10835	10835		26.796	3.7536	1	2171100			9423	3766	6624	6632	10883	10883					0.07710976458724872
FRCLLKRFVK	10	Unmodified	_FRCLLKRFVK_					0	0	0			REV__ENST00000333957.8_1_12:22602190-22602310:-|nuORF	REV__ENST00000333957.8_1_12:22602190-22602310:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2679138183594	3	437.269032	1308.78527	0.02954	1.2917E-05	-2.8053	-0.0012267	-2.7757	-0.0012137	437.26770833059527	48.1	1.3181	49.023	48.466	49.784	0.92315					115	32	4	0	0	0	0.8492	1	4725	4725		18.531	0	1	3276900	+		9424	25150	6625	6633	10884	10884					0.14322574229595375
FREIKPKRE	9	Unmodified	_FREIKPKRE_					0	0	0		nc|ENSG00000197653|Q8IVF4|DNAH10;ENSG00000197653|ENST00000673944|DNAH10;chr12:123908556-123909261|25|11.12|0.19|5.86|+|ENST00000540041|DNAH10,DNAH10	nc|ENSG00000197653|Q8IVF4|DNAH10	nc|ENSG00000197653|Q8IVF4|DNAH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.8589477539062	2	601.853847	1201.69314	3.2383	0.001949	3.0339	0.0018259	6.2721	0.0037749	601.8555799865445	103.53	2.0205	103.49	103.12	105.14	-0.043755					118	48	4	0	0	0	0.76764	1	11454	11454		34.173	2.6427	1	1395200			9425	8187	6626	6634	10885	10885					0.10036187416926623
FRFQHYKWRFS	11	Unmodified	_FRFQHYKWRFS_					0	0	0			REV__ENST00000568818.1_1_16:69964069-69965708:+|nuORF	REV__ENST00000568818.1_1_16:69964069-69965708:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	534.9437255859375	3	534.608993	1600.80515	-0.12029	-6.4306E-05	1.1488	0.00061416	1.0285	0.00054985	534.6095537250175	26.76	0.76882	26.827	26.556	27.325	0.066877					91	35	4	0	0	0	0.8398	1	1031	1031		6.6596	0.33873	1	234270	+		9426	23320	6627	6635	10886	10886					0.028780414939092225
FRFQHYKWRFS	11	Unmodified	_FRFQHYKWRFS_					0	0	0			REV__ENST00000568818.1_1_16:69964069-69965708:+|nuORF	REV__ENST00000568818.1_1_16:69964069-69965708:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	534.6087646484375	3	534.608993	1600.80515	0.68886	0.00036827	0.22631	0.00012099	0.91517	0.00048926	534.6090878240581	26.435	0.77231	26.463	26.091	26.863	0.028172					87	34	4	0	0	0	0.81407	1	1020	1020		8.4073	2.4062	1	363120	+		9427	23320	6627	6635	10887	10887					0.028780414939092225
FRGHKVILAAC	11	Unmodified	_FRGHKVILAAC_					0	0	0		ENSG00000204366|ENST00000375527|ZBTB12	ENSG00000204366|ENST00000375527|ZBTB12	ENSG00000204366|ENST00000375527|ZBTB12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5646667480469	3	405.565737	1213.67538	0.39528	0.00016031	-2.7791	-0.0011271	-2.3838	-0.00096679	405.56450530615757	63.272	1.3532	63.394	62.754	64.107	0.12253					138	58	3	0	0	0	0.732	1	5553	5553		26.063	5.0311	1	242080			9428	8436	6628	6636	10888	10888					0.07709148890467077
FRIHGCDDG	9	Unmodified	_FRIHGCDDG_					0	0	0			REV__ENSG00000274070|ENST00000616305|CASTOR2	REV__ENSG00000274070|ENST00000616305|CASTOR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2227783203125	2	510.221808	1018.42906	0.17912	9.1391E-05	1.7272	0.00088127	1.9063	0.00097266	510.22264857546446	93.108	1.9408	93.558	92.307	94.248	0.44988					118	45	4	0	0	0	0.69624	1	11140	11140		40.778	1.5253	1	1388700	+		9429	23996	6629	6637	10889	10889					-0.07941390679263804
FRIIQMPTK	9	Unmodified	_FRIIQMPTK_					0	0	0		ENST00000521980.1_1_8:124096343-124109714:+|nuORF;ENST00000518099.5_1_8:124085009-124113262:+|nuORF;ENST00000524307.5_1_8:124089445-124141439:+|nuORF;nc|ENSG00000156787|Q96DN5-3|TBC1D31;nc|ENSG00000156787|Q96DN5-2|TBC1D31;ENSG00000156787|ENST00000287380|TBC1D31	ENST00000521980.1_1_8:124096343-124109714:+|nuORF	ENST00000521980.1_1_8:124096343-124109714:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3302612304688	2	567.328619	1132.64269	0.79571	0.00045143	1.1706	0.0006641	1.9663	0.0011155	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.7932	1	9869	9869		26.693	0.62953	1	18145000			9430	5392	6630	6638	10890	10890					0.08166941767581193
FRIKRFLAKKQ	11	Unmodified	_FRIKRFLAKKQ_					0	0	0		ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.30792236328125	3	478.973384	1433.89832	-0.90815	-0.00043498	3.264	0.0015634	2.3558	0.0011284	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.80813	1	3353	3353		9.6461	0.84683	1	368580			9431	8368	6631	6639	10891	10891					0.19872965947138255
FRKIDLKP	8	Unmodified	_FRKIDLKP_					0	0	0		nc|ENSG00000134744|Q5TAX3|TUT4;ENSG00000134744|ENST00000257177|TUT4	nc|ENSG00000134744|Q5TAX3|TUT4	nc|ENSG00000134744|Q5TAX3|TUT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8140563964844	2	508.816202	1015.61785	-0.94369	-0.00048017	-2.6018	-0.0013239	-3.5455	-0.001804	508.814896871399	43.452	2.9729	44.226	43.866	46.839	0.77379					192	73	5	0	0	0	0.79403	1	4021	4021		63.306	5.0763	1	100420000			9432	3953	6632	6640	10892	10892					0.11066629956519591
FRKLLCRFLN	10	Unmodified	_FRKLLCRFLN_					0	0	0		ENST00000333957.8_1_12:22602190-22602310:-|nuORF	ENST00000333957.8_1_12:22602190-22602310:-|nuORF	ENST00000333957.8_1_12:22602190-22602310:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2562561035156	3	437.256904	1308.74888	-1.0127	-0.0004428	2.0053	0.00087685	0.99266	0.00043405	437.25769841228777	99.435	2.9287	99.435	98.234	101.16	0					165	70	3	0	0	0	0.85441	1	10075	10075		20.837	0.80668	1	385900			9433	10139	6633	6641	10893	10893					0.10685697332928612
FRKLLCRFLN	10	Unmodified	_FRKLLCRFLN_					0	0	0		ENST00000333957.8_1_12:22602190-22602310:-|nuORF	ENST00000333957.8_1_12:22602190-22602310:-|nuORF	ENST00000333957.8_1_12:22602190-22602310:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2566833496094	3	437.256904	1308.74888	-1.4909	-0.0006519	2.5222	0.0011029	1.0313	0.00045096	437.257922541183	97.247	2.1693	97.478	96.225	98.394	0.23103					136	50	3	0	0	0	0.86621	1	10093	10093		26.063	0.17167	1	478050			9434	10139	6633	6641	10894	10894					0.10685697332928612
FRKNIQILLP	10	Unmodified	_FRKNIQILLP_					0	0	0		ENST00000542038.5_1_12:21654737-21661387:+|nuORF	ENST00000542038.5_1_12:21654737-21661387:+|nuORF	ENST00000542038.5_1_12:21654737-21661387:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.392578125	2	621.390065	1240.76558	0.69841	0.00043398	3.6119	0.0022444	4.3103	0.0026784	621.3922056168815	104.57	2.6797	104.61	104.09	106.77	0.039856					250	63	5	0	0	0	0.85934	1	11364	11364		35.618	6.4482	1	13976000			9435	13521	6634	6642	10895	10895					0.1548252149052587
FRKNIQILLP	10	Unmodified	_FRKNIQILLP_					0	0	0		ENST00000542038.5_1_12:21654737-21661387:+|nuORF	ENST00000542038.5_1_12:21654737-21661387:+|nuORF	ENST00000542038.5_1_12:21654737-21661387:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3932495117188	2	621.390065	1240.76558	1.3	0.00080781	2.97	0.0018456	4.2701	0.0026534	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.86452	1	11175	11175		30.504	0.18592	1	23079000			9436	13521	6634	6642	10896	10896					0.1548252149052587
FRKRVDKVF	9	Unmodified	_FRKRVDKVF_					0	0	0			REV__nc|ENSG00000100938|Q9P2T1-3|GMPR2	REV__nc|ENSG00000100938|Q9P2T1-3|GMPR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.855712890625	2	597.858932	1193.70331	-1.2963	-0.00077498	-3.2141	-0.0019216	-4.5103	-0.0026965	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.77244	1	9186	9186		32.812	3.6424	1	2401200	+		9437	29741	6635	6643	10897	10897					0.11420795142180395
FRKSELYAL	9	Unmodified	_FRKSELYAL_					0	0	0			REV__nc|ENSG00000169398|Q05397-4|PTK2	REV__nc|ENSG00000169398|Q05397-4|PTK2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	563.814697265625	2	563.816399	1125.61824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.114	1	57.114	56.614	57.614	0								0	0	0	0.31437	1	4897	4897		25.574	1.3713	1		+		9438	21576	6636	6644	10898	10898					0.060460048857066795
FRLFCMRTN	9	Oxidation (M)	_FRLFCM(Oxidation (M))RTN_		FRLFCM(1)RTN		FRLFCM(44)RTN	0	0	1			REV__ENST00000229340.9_1_12:120533638-120533773:-|nuORF	REV__ENST00000229340.9_1_12:120533638-120533773:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	602.2929077148438	2	602.291711	1202.56887	0.81411	0.00049033	-1.678	-0.0010106	-0.86389	-0.00052032	602.2906276618733	28.55	0.42531	28.377	28.122	28.547	-0.17336					19	10	2	0	0	0	0.64555	1	1743	1743		44.377	7.9304	1	173940	+		9439	24190	6637	6645	10899	10899		377			-0.024313496664035483
FRLIFLVAPPL	11	Unmodified	_FRLIFLVAPPL_					0	0	0		ENST00000545888.6_1_12:57892336-57894135:+|nuORF	ENST00000545888.6_1_12:57892336-57894135:+|nuORF	ENST00000545888.6_1_12:57892336-57894135:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.4019775390625	2	643.405184	1284.79581	1.8406	0.0011842	0.27826	0.00017904	2.1188	0.0013633	643.4053924828975	105.47	1.8662	105.63	104.96	106.83	0.15583					141	64	4	0	0	0	0.67493	1	12861	12861		35.618	12.096	1	653380			9440	13581	6638	6646	10900	10900					0.16480880155700106
FRLKLRQRL	9	Unmodified	_FRLKLRQRL_					0	0	0			REV__ENSG00000178295|ENST00000381254|GEN1	REV__ENSG00000178295|ENST00000381254|GEN1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	615.4055786132812	2	615.401299	1228.78804	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.569	1	52.64	52.14	53.14	0.070713								0	0	0	0.32159	1	4246	4246		23.042	5.6775	1		+		9441	22272	6639	6647	10901	10901					0.18280165678788762
FRLLGNVL	8	Unmodified	_FRLLGNVL_					0	0	0		CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2895202636719	2	466.28982	930.565087	-1.3157	-0.00061351	1.5891	0.00074096	0.27333	0.00012745	466.29039897325373	74.355	0.67729	74.355	74.138	74.815	0					55	29	3	0	0	0	0.92973	1	6701	6701		50.025	7.6284	1	318180		+	9442	8826;620	6640	6648	10902	10902					0.09702671893705883
FRLLGNVL	8	Unmodified	_FRLLGNVL_					0	0	0		CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.28961181640625	2	466.28982	930.565087	-0.11855	-5.5279E-05	0.27043	0.0001261	0.15188	7.0821E-05	466.2897602326147	74.173	1.0938	74.216	73.973	75.067	0.0429					90	43	3	0	0	0	0.3646	4	7101	7083;7091;7101;7127		92.191	7.4156	1	860010		+	9443	8826;620	6640	6648	10903;10904;10905;10906	10905					0.09702671893705883
FRLLGNVL	8	Unmodified	_FRLLGNVL_					0	0	0		CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2893981933594	2	466.28982	930.565087	-0.42617	-0.00019872	0.52169	0.00024326	0.095514	4.4537E-05	466.2898922448067	74.098	1.2536	74.054	73.807	75.061	-0.043877					90	43	4	0	0	0	0.3622	5	7262	7246;7254;7262;7272;7280		101.21	23.268	1	967050		+	9444	8826;620	6640	6648	10907;10908;10909;10910;10911	10909					0.09702671893705883
FRLLGNVL	8	Unmodified	_FRLLGNVL_					0	0	0		CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2899169921875	2	466.28982	930.565087	-0.64111	-0.00029894	0.64441	0.00030048	0.0033003	1.5389E-06	466.28999408550436	73.948	1.2575	73.992	73.721	74.978	0.043648					98	48	3	0	0	0	0.67263	1	7164	7164		68.485	13.72	1	991630		+	9445	8826;620	6640	6648	10912	10912					0.09702671893705883
FRLLGNVL	8	Unmodified	_FRLLGNVL_					0	0	0		CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2890930175781	2	466.28982	930.565087	-1.0457	-0.00048758	1.1245	0.00052435	0.078871	3.6777E-05	466.29021591001344	73.859	1.0735	73.986	73.713	74.787	0.1271					83	42	3	0	0	0	0.47906	3	6809	6790;6799;6809		76.847	18.065	1	958110		+	9446	8826;620	6640	6648	10913;10914;10915	10915					0.09702671893705883
FRLLGNVL	8	Unmodified	_FRLLGNVL_					0	0	0		CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.28900146484375	2	466.28982	930.565087	0.52735	0.0002459	-0.45222	-0.00021086	0.075133	3.5034E-05	466.28951494352106	73.831	0.94804	73.962	73.721	74.669	0.13127					82	37	3	0	0	0	0.67263	3	6804	6788;6804;6812		68.485	9.7027	1	894650		+	9447	8826;620	6640	6648	10916;10917;10918	10917					0.09702671893705883
FRLLGNVL	8	Unmodified	_FRLLGNVL_					0	0	0		CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.2892150878906	2	466.28982	930.565087	-1.2303	-0.0005737	1.203	0.00056094	-0.027368	-1.2762E-05	466.29024869048817	74.015	1.0053	74.101	73.822	74.827	0.085907					87	43	3	0	0	0	0.67263	2	6800	6800;6808		68.485	2.5872	1	935090		+	9448	8826;620	6640	6648	10919;10920	10919					0.09702671893705883
FRLLGNVL	8	Unmodified	_FRLLGNVL_					0	0	0		CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2895812988281	2	466.28982	930.565087	-1.1838	-0.00055201	1.3476	0.00062836	0.16374	7.6351E-05	466.29033790400257	73.255	0.82825	73.643	73.291	74.119	0.38779					44	22	3	0	0	0	0.67263	2	8199	8199;8222		68.485	5.5063	1	1844000		+	9449	8826;620	6640	6648	10921;10922	10921					0.09702671893705883
FRLLGNVL	8	Unmodified	_FRLLGNVL_					0	0	0		CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.2887878417969	2	466.28982	930.565087	-0.2678	-0.00012487	0.44266	0.00020641	0.17486	8.1533E-05	466.28988601082216	73.11	1.1799	73.664	73.314	74.494	0.55386					47	33	3	0	0	0	0.41376	3	8235	8210;8222;8235		79.939	11.032	1	1946100		+	9450	8826;620	6640	6648	10923;10924;10925	10925					0.09702671893705883
FRLLLIFVII	10	Unmodified	_FRLLLIFVII_					0	0	0			REV__nc|ENSG00000188782|Q7RTX7-2|CATSPER4	REV__nc|ENSG00000188782|Q7RTX7-2|CATSPER4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.9166259765625	2	623.917927	1245.8213	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.65	1	109.73	109.23	110.23	0.078552								0	0	0	0.45132	1	11778	11778		17.365	5.1581	1		+		9451	23029	6641	6649	10926	10926					0.20822354678148258
FRLQKSAKELA	11	Unmodified	_FRLQKSAKELA_					0	0	0			REV__ENSG00000158169|ENST00000289081|FANCC	REV__ENSG00000158169|ENST00000289081|FANCC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	645.88427734375	2	645.880062	1289.74557	1.6037	0.0010358	3.8348	0.0024768	5.4385	0.0035126	645.8824480849914	105.51	1.1194	105.67	105	106.12	0.15924					80	28	3	0	0	0	0.72374	1	11258	11258		18.262	0	1	2558100	+		9452	20594	6642	6650	10927	10927					0.1122872575990641
FRLYRRLVLE	10	Unmodified	_FRLYRRLVLE_					0	0	0		nc|ENSG00000170054|Q86WD7-2|SERPINA9;ENSG00000170054|ENST00000674397|SERPINA9;nc|ENSG00000170054|Q86WD7-7|SERPINA9	nc|ENSG00000170054|Q86WD7-2|SERPINA9	nc|ENSG00000170054|Q86WD7-2|SERPINA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6086120605469	3	455.610223	1363.80884	-0.22489	-0.00010246	-3.6902	-0.0016813	-3.9151	-0.0017838	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.86338	1	7610	7610		31.634	8.2564	1	1863900			9453	6557	6643	6651	10928	10928					0.14148711267785075
FRNAIDKLIK	10	Unmodified	_FRNAIDKLIK_					0	0	0			REV__ENSG00000067704|ENST00000366922|IARS2	REV__ENSG00000067704|ENST00000366922|IARS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.58306884765625	3	406.583674	1216.72919	3.1308	0.0012729	-2.164	-0.00087985	0.96679	0.00039308	406.5827071519945	112.24	0.82966	112.27	112.06	112.89	0.030602					58	32	2	0	0	0	0.85086	1	13561	13561		19.263	0	1	1459000	+		9454	16547	6644	6652	10929	10929					0.1294964459377752
FRNAKKGT	8	Unmodified	_FRNAKKGT_					0	0	0		nc|ENSG00000181991|P82912-3|MRPS11;nc|ENSG00000181991|P82912-2|MRPS11;ENSG00000181991|ENST00000325844|MRPS11	nc|ENSG00000181991|P82912-3|MRPS11	nc|ENSG00000181991|P82912-3|MRPS11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	461.265380859375	2	461.266876	920.519199	-1.0648	-0.00049114	-3.0408	-0.0014026	-4.1056	-0.0018938	461.26543932022855	93.43	1.414	93.43	92.938	94.352	0					57	32	2	0	0	0	0.87922	1	9214	9214		31.955	2.8053	1	637680			9455	7416	6645	6653	10930	10930					0.0557602671146924
FRNAKKGT	8	Unmodified	_FRNAKKGT_					0	0	0		nc|ENSG00000181991|P82912-3|MRPS11;nc|ENSG00000181991|P82912-2|MRPS11;ENSG00000181991|ENST00000325844|MRPS11	nc|ENSG00000181991|P82912-3|MRPS11	nc|ENSG00000181991|P82912-3|MRPS11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	461.265380859375	2	461.266876	920.519199	-0.1247	-5.752E-05	-3.7143	-0.0017133	-3.839	-0.0017708	461.2649815864835	93.17	1.5107	93.239	92.756	94.266	0.06987					100	35	4	0	0	0	0.86288	1	9697	9697		26.796	0	1	1215800			9456	7416	6645	6653	10931	10931					0.0557602671146924
FRNAKKGT	8	Unmodified	_FRNAKKGT_					0	0	0		nc|ENSG00000181991|P82912-3|MRPS11;nc|ENSG00000181991|P82912-2|MRPS11;ENSG00000181991|ENST00000325844|MRPS11	nc|ENSG00000181991|P82912-3|MRPS11	nc|ENSG00000181991|P82912-3|MRPS11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.26483154296875	2	461.266876	920.519199	-1.0841	-0.00050006	-2.5151	-0.0011601	-3.5992	-0.0016602	461.2654587465461	92.902	1.3314	93.128	92.662	93.993	0.22547					93	31	4	0	0	0	0.87922	1	9428	9428		31.955	0	1	1040400			9457	7416	6645	6653	10932	10932					0.0557602671146924
FRNSRGVGG	9	Unmodified	_FRNSRGVGG_					0	0	0		ENST00000522792.1_1_5:138268134-138269775:+|nuORF	ENST00000522792.1_1_5:138268134-138269775:+|nuORF	ENST00000522792.1_1_5:138268134-138269775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	475.2522888183594	2	475.251757	948.488962	-0.30594	-0.0001454	0.24176	0.0001149	-0.064172	-3.0498E-05	475.2517597895857	20.234	0.54551	20.164	19.955	20.501	-0.069733					38	21	3	0	0	0	0.66686	1	512	512		42.864	0.38981	1	125520			9458	13192	6646	6654	10933	10933					0.012656680463010161
FRPFHTLLRKI	11	Unmodified	_FRPFHTLLRKI_					0	0	0		nc|ENSG00000159733|Q9HCC9-5|ZFYVE28;nc|ENSG00000159733|Q9HCC9-4|ZFYVE28;nc|ENSG00000159733|Q9HCC9-3|ZFYVE28;nc|ENSG00000159733|Q9HCC9-2|ZFYVE28;ENSG00000159733|ENST00000290974|ZFYVE28	nc|ENSG00000159733|Q9HCC9-5|ZFYVE28	nc|ENSG00000159733|Q9HCC9-5|ZFYVE28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62384033203125	3	476.625984	1426.85612	-1.6911	-0.000806	-3.0916	-0.0014735	-4.7826	-0.0022795	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.75121	3	12136	12136;12653;12760		21.78	5.4003	1	2577100			9459	5545	6647	6655	10934;10935;10936	10934					0.1597699053877477
FRPPTSIN	8	Unmodified	_FRPPTSIN_					0	0	0		ENST00000329548.4_1_12:53646782-53646899:+|nuORF	ENST00000329548.4_1_12:53646782-53646899:+|nuORF	ENST00000329548.4_1_12:53646782-53646899:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.25335693359375	2	466.253434	930.492316	0.40858	0.0001905	0.44177	0.00020598	0.85035	0.00039648	466.2535455662522	60.895	1.1821	61.014	60.015	61.197	0.11901					69	45	2	0	0	0	0.87064	1	5216	5216		29.15	0	1	266480			9460	10101	6648	6656	10937	10937					0.024289181002927762
FRQRLGFLSP	10	Unmodified	_FRQRLGFLSP_					0	0	0			REV__ENST00000528814.1_1_8:38126038-38126254:-|nuORF	REV__ENST00000528814.1_1_8:38126038-38126254:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.5662536621094	3	407.568135	1219.68258	0.399	0.00016262	-3.0311	-0.0012354	-2.6321	-0.0010727	407.56682923332073	26.935	0.46041	26.976	26.674	27.134	0.040834					21	13	2	0	0	0	0.86047	1	1176	1176		23.523	0.14478	1	32194	+		9461	28257	6649	6657	10938	10938					0.0815220476254126
FRRAKFKSLT	10	Unmodified	_FRRAKFKSLT_					0	0	0		nc|ENSG00000143127|O75578-3|ITGA10;ENSG00000143127|ENST00000369304|ITGA10	nc|ENSG00000143127|O75578-3|ITGA10	nc|ENSG00000143127|O75578-3|ITGA10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8836059570312	2	627.377489	1252.74043	6.5824	0.0041297	0.80567	0.00050546	7.3881	0.0046351	627.3778931643454	110.88	0.7373	110.93	110.56	111.3	0.049095					56	30	2	0	0	0	0.8608	1	13452	13452		34.173	1.3601	1	362180			9462	4603	6650	6658	10939	10939					0.1241646668793237
FRRAKFKSLT	10	Unmodified	_FRRAKFKSLT_					0	0	0		nc|ENSG00000143127|O75578-3|ITGA10;ENSG00000143127|ENST00000369304|ITGA10	nc|ENSG00000143127|O75578-3|ITGA10	nc|ENSG00000143127|O75578-3|ITGA10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.38525390625	2	627.377489	1252.74043	6.5832	0.0041301	1.563	0.00098061	8.1462	0.0051107	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.85466	1	13748	13748		20.947	0	1	94412			9463	4603	6650	6658	10940	10940					0.1241646668793237
FRRAKFKSLT	10	Unmodified	_FRRAKFKSLT_					0	0	0		nc|ENSG00000143127|O75578-3|ITGA10;ENSG00000143127|ENST00000369304|ITGA10	nc|ENSG00000143127|O75578-3|ITGA10	nc|ENSG00000143127|O75578-3|ITGA10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3810424804688	2	627.377489	1252.74043	6.5853	0.0041315	1.6758	0.0010514	8.2611	0.0051828	627.8801792740767	116.06	0.52161	116.02	115.76	116.28	-0.037872					33	25	2	0	0	0	0.85251	1	13950	13950		19.997	4.355	1	73619			9464	4603	6650	6658	10941	10941					0.1241646668793237
FRRAKFKSLT	10	Unmodified	_FRRAKFKSLT_					0	0	0		nc|ENSG00000143127|O75578-3|ITGA10;ENSG00000143127|ENST00000369304|ITGA10	nc|ENSG00000143127|O75578-3|ITGA10	nc|ENSG00000143127|O75578-3|ITGA10	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	627.377489	1252.74043	2.3056	0.0014465	6.3255	0.0039685	8.6311	0.005415	627.882924913718	116.37	1.4622	116.35	115.84	117.3	-0.014992	0.16764	0.00050012	NaN	19.997	147	72	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	126330			9465	4603	6650	6658							0.1241646668793237
FRRKSKTRFLQ	11	Unmodified	_FRRKSKTRFLQ_					0	0	0			REV__ENSG00000171219|ENST00000342711|CDC42BPG	REV__ENSG00000171219|ENST00000342711|CDC42BPG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.6303405761719	3	489.628276	1465.863	-1.975	-0.00096703	-0.21006	-0.00010285	-2.1851	-0.0010699	489.62808612018074	17.531	0.32648	17.531	17.288	17.615	0					25	14	2	0	0	0	0.7896	1	212	212		13.508	1.0751	1	34373	+		9466	21721	6651	6659	10942	10942					0.14870303419343145
FRRKSKTRFLQ	11	Unmodified	_FRRKSKTRFLQ_					0	0	0			REV__ENSG00000171219|ENST00000342711|CDC42BPG	REV__ENSG00000171219|ENST00000342711|CDC42BPG	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	489.628276	1465.863	-0.79835	-0.00039089	-1.2729	-0.00062324	-2.0712	-0.0010141	489.6275876443297	17.199	0.58948	17.244	16.995	17.584	0.0457	-0.031632	0.0011148	NaN	13.508	83	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	381230	+		9467	21721	6651	6659							0.14870303419343145
FRRKSKTRFLQ	11	Unmodified	_FRRKSKTRFLQ_					0	0	0			REV__ENSG00000171219|ENST00000342711|CDC42BPG	REV__ENSG00000171219|ENST00000342711|CDC42BPG	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	489.628276	1465.863	0.071321	3.4921E-05	-2.3844	-0.0011675	-2.3131	-0.0011326	489.6270714110276	17.11	0.57016	17.173	16.938	17.509	0.062603	-0.10348	-0.00051787	NaN	13.508	74	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	595890	+		9468	21721	6651	6659							0.14870303419343145
FRRKSKTRFLQ	11	Unmodified	_FRRKSKTRFLQ_					0	0	0			REV__ENSG00000171219|ENST00000342711|CDC42BPG	REV__ENSG00000171219|ENST00000342711|CDC42BPG	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	489.628276	1465.863	0.73686	0.00036079	-2.9155	-0.0014275	-2.1787	-0.0010667	489.6267861871931	17.18	0.61579	17.156	16.872	17.488	-0.024033	-0.11972	-0.001298	NaN	13.508	85	29	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	642190	+		9469	21721	6651	6659							0.14870303419343145
FRRLHVERLQ	10	Unmodified	_FRRLHVERLQ_					0	0	0			REV__ENSG00000160796|ENST00000450053|NBEAL2	REV__ENSG00000160796|ENST00000450053|NBEAL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9323425292969	3	451.933588	1352.77894	-0.13819	-6.2454E-05	-1.9412	-0.00087729	-2.0794	-0.00093975	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.86207	1	10793	10793		24.232	3.1996	1	924270	+		9470	20741	6652	6660	10943	10943					0.11665772322453449
FRRMYFDDTHV	11	Unmodified	_FRRMYFDDTHV_					0	0	0			REV__nc|ENSG00000197555|O43166-3|SIPA1L1	REV__nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.23565673828125	3	496.234716	1485.68232	-1.326	-0.00065802	3.5442	0.0017588	2.2182	0.0011008	496.2363389986711	46.94	1.2713	47.411	46.775	48.047	0.47139					69	30	4	0	0	0	0.74022	1	4478	4478		24.232	1.6702	1	4069000	+		9471	23244	6653	6661	10944	10944					-0.04109583019658203
FRRRKKAS	8	Unmodified	_FRRRKKAS_					0	0	0			REV__nc|ENSG00000156697|Q9BVJ6-2|UTP14A	REV__nc|ENSG00000156697|Q9BVJ6-2|UTP14A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8273315429688	2	524.827966	1047.64138	-0.1321	-6.933E-05	-2.099	-0.0011016	-2.2311	-0.001171	524.8267772586088	99.003	3.4379	99.226	98.52	101.96	0.22263					298	81	5	0	0	0	0.7961	1	10665	10665		17.365	1.7287	1	31133000	+		9472	20503	6654	6662	10945	10945					0.1194648851369493
FRRRRWRRKMA	11	Unmodified	_FRRRRWRRKMA_					0	0	0		nc|ENSG00000138119|Q9NZM1-5|MYOF;nc|ENSG00000138119|Q9NZM1-2|MYOF;nc|ENSG00000138119|Q9NZM1-6|MYOF;nc|ENSG00000138119|Q9NZM1-3|MYOF;ENSG00000138119|ENST00000359263|MYOF	nc|ENSG00000138119|Q9NZM1-5|MYOF	nc|ENSG00000138119|Q9NZM1-5|MYOF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.3147583007812	3	540.319783	1617.93752	4.036	0.0021807	0.82193	0.00044411	4.858	0.0026248	540.6547038403598	106.83	1.1664	106.98	106.51	107.68	0.14929					94	46	4	0	0	0	0.88916	1	13038	13038		3.4087	0.19739	1	229550			9473	4274	6655	6663	10946	10946					0.15326787749722826
FRRTIRLKLIY	11	Unmodified	_FRRTIRLKLIY_					0	0	0		nc|ENSG00000132170|P37231-3|PPARG;ENST00000477039.5_1_3:12393091-12447643:+|nuORF;ENSG00000132170|ENST00000651735|PPARG;nc|ENSG00000132170|P37231-2|PPARG;nc|ENSG00000132170|P37231|PPARG	nc|ENSG00000132170|P37231-3|PPARG	nc|ENSG00000132170|P37231-3|PPARG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.6510314941406	3	493.648789	1477.92454	0.28936	0.00014284	1.4809	0.00073102	1.7702	0.00087386	493.6493656295497	44.418	1.6555	44.467	43.631	45.286	0.048996					106	39	4	0	0	0	0.79945	1	3081	3081		11.455	8.0459	1	509790			9474	3769	6656	6664	10947	10947					0.20469235118639517
FRRVKLEVF	9	Unmodified	_FRRVKLEVF_					0	0	0			REV__ENST00000331327.4_1_5:139495366-139495495:+|nuORF	REV__ENST00000331327.4_1_5:139495366-139495495:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.3587036132812	2	597.361308	1192.70806	-0.56757	-0.00033904	-4.3826	-0.002618	-4.9502	-0.0029571	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.78536	1	10706	10706		29.15	3.5755	1	3951300	+		9475	25123	6657	6665	10948	10948					0.11941679284950624
FRRVKLEVF	9	Unmodified	_FRRVKLEVF_					0	0	0			REV__ENST00000331327.4_1_5:139495366-139495495:+|nuORF	REV__ENST00000331327.4_1_5:139495366-139495495:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.3583374023438	2	597.361308	1192.70806	-1.2979	-0.00077532	-4.1559	-0.0024826	-5.4539	-0.0032579	597.3583970456502	100.18	2.7493	100.35	98.666	101.42	0.17199					156	64	4	0	0	0	0.78058	1	10422	10422		30.504	1.3541	1	2737400	+		9476	25123	6657	6665	10949	10949					0.11941679284950624
FRRVREAK	8	Unmodified	_FRRVREAK_					0	0	0			REV__ENST00000296603.4_1_5:36151784-36151925:-|nuORF	REV__ENST00000296603.4_1_5:36151784-36151925:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3179931640625	2	531.319974	1060.6254	1.7702	0.00094052	-3.3922	-0.0018023	-1.622	-0.00086181	531.3180188955155	94.734	1.4927	95.166	94.713	96.206	0.4324					93	35	4	0	0	0	0.87064	1	11282	11282		29.15	0.89528	1	2051100	+		9477	24719	6658	6666	10950	10950					0.09750782276796599
FRRVREAK	8	Unmodified	_FRRVREAK_					0	0	0			REV__ENST00000296603.4_1_5:36151784-36151925:-|nuORF	REV__ENST00000296603.4_1_5:36151784-36151925:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.31787109375	2	531.319974	1060.6254	0.23787	0.00012639	-2.4591	-0.0013066	-2.2212	-0.0011802	531.3183123814076	94.878	1.4608	95.298	94.89	96.35	0.41963					101	35	4	0	0	0	0.87064	1	11428	11428		29.15	1.2673	1	2093500	+		9478	24719	6658	6666	10951	10951					0.09750782276796599
FRRVRLASA	9	Unmodified	_FRRVRLASA_					0	0	0		ENST00000464942.6_1_12:122710297-122710606:-|nuORF	ENST00000464942.6_1_12:122710297-122710606:-|nuORF	ENST00000464942.6_1_12:122710297-122710606:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3265380859375	2	538.327799	1074.64105	1.246	0.00067076	-2.9722	-0.0016	-1.7262	-0.00092924	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.78536	1	11205	11205		29.15	1.0681	1	76567000			9479	12101	6659	6667	10952	10952					0.10671068793840277
FRRVRLASA	9	Unmodified	_FRRVRLASA_					0	0	0		ENST00000464942.6_1_12:122710297-122710606:-|nuORF	ENST00000464942.6_1_12:122710297-122710606:-|nuORF	ENST00000464942.6_1_12:122710297-122710606:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3274536132812	2	538.327799	1074.64105	-1.4902	-0.00080221	0.37298	0.00020079	-1.1172	-0.00060142	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12483	12483		24.203	1.1603	1	4041000			9480	12101	6659	6667	10953	10953					0.10671068793840277
FRRWTQRRRRN	11	Unmodified	_FRRWTQRRRRN_					0	0	0		ENST00000233468.4_1_2:24290678-24291201:-|nuORF	ENST00000233468.4_1_2:24290678-24291201:-|nuORF	ENST00000233468.4_1_2:24290678-24291201:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	544.97900390625	3	544.645324	1630.91414	0.83895	0.00045693	-2.0475	-0.0011152	-1.2086	-0.00065825	544.9786333786221	99.737	1.9483	99.888	99.068	101.02	0.15073					74	45	2	0	0	0	0.92084	1	10421	10421		1.3219	0.089996	1	125720			9481	9224	6660	6668	10954	10954					0.12392065236736016
FRVALLPG	8	Unmodified	_FRVALLPG_					0	0	0		ENST00000380751.9_2_5:69321199-69322288:+|nuORF	ENST00000380751.9_2_5:69321199-69322288:+|nuORF	ENST00000380751.9_2_5:69321199-69322288:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.77374267578125	2	436.771263	871.527973	1.719	0.00075083	3.741	0.001634	5.4601	0.0023848	436.7728637819823	27.429	0.51398	27.174	26.811	27.325	-0.25465					26	11	3	0	0	0	0.86288	2	1594	1584;1594		37.028	7.1869	1	997660			9482	10932	6661	6669	10955;10956	10956					0.0870700034794254
FRVVSGGR	8	Unmodified	_FRVVSGGR_					0	0	0		ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	439.2516784667969	2	439.253769	876.492984	-1.1349	-0.00049849	-1.1987	-0.00052652	-2.3335	-0.001025	439.25333124331416	91.078	2.4612	91.078	90.52	92.981	0					97	57	3	0	0	0	0.90465	1	8938	8938		40.573	15.122	1	1134200			9483	4261	6662	6670	10957	10957					0.04979757540013452
FRYKYRRWRQW	11	Unmodified	_FRYKYRRWRQW_					0	0	0			REV__nc|ENSG00000155542|Q8NE22-2|SETD9	REV__nc|ENSG00000155542|Q8NE22-2|SETD9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26519775390625	4	436.987838	1743.92225	-0.51057	-0.00022311	-2.958	-0.0012926	-3.4686	-0.0015157	437.2375176255152	27.034	0.17805	26.858	26.748	26.926	-0.17559					5	3	2	0	0	0	0.18408	1	1512	1512		3.4087	3.4087	1	30177	+		9484	20432	6663	6671	10958	10958					0.08004199433526082
FSAEDIAKI	9	Unmodified	_FSAEDIAKI_					0	0	0		nc|ENSG00000112118|P25205-2|MCM3;ENSG00000112118|ENST00000596288|MCM3;ENST00000476448.1_1_6:52141011-52144220:-|nuORF	nc|ENSG00000112118|P25205-2|MCM3	nc|ENSG00000112118|P25205-2|MCM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.26513671875	2	497.266207	992.517862	-0.29277	-0.00014559	0.29497	0.00014668	0.0021975	1.0927E-06	497.2662054510893	77.412	0.75926	77.981	77.661	78.421	0.56836					47	17	3	0	0	0	0.073112	1	8857	8857		99.375	5.3685	1	975420			9485	2632	6664	6672	10959	10959					0.02130347832053303
FSALFILF	8	Unmodified	_FSALFILF_					0	0	0		ENSG00000116138|ENST00000375847|DNAJC16;nc|ENSG00000116138|Q9Y2G8-2|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27850341796875	2	479.275847	956.537141	0.75121	0.00036004	3.2564	0.0015607	4.0076	0.0019207	479.2773206113693	97.297	1.0964	97.46	96.922	98.018	0.16317					63	25	3	0	0	0	0.88915	1	10066	10066		35.201	1.7077	1	731730			9486	2902	6665	6673	10960	10960					0.05713348913604932
FSALKKLVGSD	11	Unmodified	_FSALKKLVGSD_					0	0	0		ENST00000459985.1_1_9:139702417-139703723:+|nuORF;ENST00000415992.5_1_9:139702603-139703092:+|nuORF;nc|ENSG00000196642|Q3YEC7-4|RABL6;nc|ENSG00000196642|Q3YEC7-5|RABL6;nc|ENSG00000196642|Q3YEC7-6|RABL6;nc|ENSG00000196642|Q3YEC7-3|RABL6;ENSG00000196642|ENST00000311502|RABL6;nc|ENSG00000196642|Q3YEC7-2|RABL6	ENST00000459985.1_1_9:139702417-139703723:+|nuORF	ENST00000459985.1_1_9:139702417-139703723:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.833740234375	2	582.834788	1163.65502	-1.3452	-0.00078404	-2.3068	-0.0013445	-3.6521	-0.0021286	582.8334573704366	94.259	3.5437	94.457	93.113	96.657	0.19827					191	84	3	0	0	0	0.69248	1	9547	9547		32.751	4.669	1	775360			9487	8085	6666	6674	10961	10961					0.07974256711622729
FSASNINL	8	Unmodified	_FSASNINL_					0	0	0			REV__nc|ENSG00000134369|Q8NEY1-6|NAV1	REV__nc|ENSG00000134369|Q8NEY1-6|NAV1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.19598388671875	2	433.224342	864.434132	1.9284	0.00083543	3.4817	0.0015084	5.4101	0.0023438	433.225860496441	24.177	0.43964	23.663	23.572	24.012	-0.51365					16	9	2	0	0	0	0.4196	1	1153	1153		53.351	7.3995	1	90624	+		9488	19136	6667	6675	10962	10962					-0.0035076354499778972
FSATLHEL	8	Unmodified	_FSATLHEL_					0	0	0			REV__nc|ENSG00000143603|Q9UGI6-3|KCNN3	REV__nc|ENSG00000143603|Q9UGI6-3|KCNN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	459.2391357421875	2	459.239993	916.465432	-1.1984	-0.00055035	1.3137	0.00060332	0.11533	5.2964E-05	459.24036857381975	47.447	1.199	47.466	47.099	48.298	0.018967					78	36	3	0	0	0	0.5397	2	3536	3536;3569		73.975	16.163	1	800470	+		9489	19825	6668	6676	10963;10964	10963					0.0038580948910293955
FSATLHEL	8	Unmodified	_FSATLHEL_					0	0	0			REV__nc|ENSG00000143603|Q9UGI6-3|KCNN3	REV__nc|ENSG00000143603|Q9UGI6-3|KCNN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	459.2389831542969	2	459.239993	916.465432	0.28287	0.00012991	-0.317	-0.00014558	-0.034134	-1.5676E-05	459.23972142324425	47.477	1.3773	47.515	47.034	48.411	0.037731					78	43	2	0	0	0	0.41376	1	3565	3565		79.939	21.157	1	852740	+		9490	19825	6668	6676	10965	10965					0.0038580948910293955
FSATLHEL	8	Unmodified	_FSATLHEL_					0	0	0			REV__nc|ENSG00000143603|Q9UGI6-3|KCNN3	REV__nc|ENSG00000143603|Q9UGI6-3|KCNN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	459.23980712890625	2	459.239993	916.465432	-0.30768	-0.0001413	0.35801	0.00016441	0.05033	2.3114E-05	459.23999743377124	47.433	1.4389	47.345	46.818	48.257	-0.087646					86	43	3	0	0	0	0.79403	2	3561	3561;3571		63.306	5.4677	1	943680	+		9491	19825	6668	6676	10966;10967	10966					0.0038580948910293955
FSAWSPQLF	9	Unmodified	_FSAWSPQLF_					0	0	0			REV__ENST00000290776.12_1_16:57181576-57181753:+|nuORF	REV__ENST00000290776.12_1_16:57181576-57181753:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	541.7666625976562	2	541.768917	1081.52328	-1.2683	-0.00068713	-2.8077	-0.0015211	-4.0761	-0.0022083	541.7673879234059	50.314	0.60478	50.314	49.971	50.576	0					24	14	2	0	0	0	0.67345	1	4016	4016		42.396	0	1	87882	+		9492	24660	6669	6677	10968	10968					-0.014219285855006092
FSCCYPAVAL	10	Unmodified	_FSCCYPAVAL_					0	0	0		ENSG00000179698|ENST00000323662|WDR97;nc|ENSG00000179698|A6NE52-2|WDR97;ENST00000533108.1_1_8:145164641-145165891:+|nuORF	ENSG00000179698|ENST00000323662|WDR97	ENSG00000179698|ENST00000323662|WDR97	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.313720703125	2	537.243363	1072.47217	0.074542	4.0047E-05	-0.46154	-0.00024796	-0.387	-0.00020791	537.2428564775	49.225	0.40152	50.129	49.971	50.372	0.90424					12	9	2	0	0	0	0.37624	1	4821	4821		27.882	11.409	1	150240			9493	7288	6670	6678	10969	10969					-0.06116336946206502
FSCFPGYRLE	10	Unmodified	_FSCFPGYRLE_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	407.2875061035156	3	406.858586	1217.55393	0.40454	0.00016459	-2.8946	-0.0011777	-2.49	-0.0010131	407.1913715068329	64.217	0.15345	64.341	64.284	64.438	0.12397					8	6	2	0	0	0	0.37624	1	5662	5662		23.378	21.197	1	29452			9494	3201	6671	6679	10970	10970					-0.046145182627469694
FSCSSGIH	8	Unmodified	_FSCSSGIH_					0	0	0			REV__nc|ENSG00000110171|O75382-4|TRIM3	REV__nc|ENSG00000110171|O75382-4|TRIM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1841125488281	2	419.18162	836.348688	2.0844	0.00087374	2.1028	0.00088145	4.1872	0.0017552	419.1826528067583	100.01	2.1606	100.34	99.379	101.54	0.33294					130	55	5	0	0	0	0.9159	1	12049	12049		44.531	5.7249	1	8540100	+		9495	17801	6672	6680	10971	10971					-0.07603252002297722
FSDDSSQLTIK	11	Unmodified	_FSDDSSQLTIK_					0	0	0		nc|ENSG00000149294|P13591-6|NCAM1;nc|ENSG00000149294|P13591-5|NCAM1;nc|ENSG00000149294|P13591-4|NCAM1;nc|ENSG00000149294|P13591-3|NCAM1;nc|ENSG00000149294|P13591-1|NCAM1;ENSG00000149294|ENST00000316851|NCAM1	nc|ENSG00000149294|P13591-6|NCAM1	nc|ENSG00000149294|P13591-6|NCAM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.8110961914062	2	620.806425	1239.5983	0.1525	9.4673E-05	2.9692	0.0018433	3.1217	0.001938	620.8084857499598	59.522	1.8774	60.075	59.343	61.22	0.55323					109	49	4	0	0	0	0.45992	1	6279	6279		54.722	1.7857	1	3699000			9496	5015	6673	6681	10972	10972					-0.011918356355636206
FSDQQIPCM	9	Oxidation (M)	_FSDQQIPCM(Oxidation (M))_		FSDQQIPCM(1)		FSDQQIPCM(41)	0	0	1			REV__ENST00000370711.9_1_6:56963880-56964333:+|nuORF	REV__ENST00000370711.9_1_6:56963880-56964333:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	542.72412109375	2	542.725535	1083.43652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.838	1	32.891	32.391	33.391	0.05246								0	0	0	0.29273	1	1556	1556		40.778	12.524	1		+		9497	25662	6674	6682	10973	10973		399			-0.10186419193860274
FSDWETKD	8	Unmodified	_FSDWETKD_					0	0	0			REV__ENSG00000167139|ENST00000300504|TBC1D21	REV__ENSG00000167139|ENST00000300504|TBC1D21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.2197875976562	2	514.221997	1026.42944	0.27738	0.00014263	-4.227	-0.0021736	-3.9496	-0.002031	514.2197149185718	29.944	1.3268	29.929	29.112	30.438	-0.015167					73	38	4	0	0	0	0.73851	1	1537	1537		65.803	4.8312	1	411270	+		9498	21359	6675	6683	10974	10974					-0.08271692478410841
FSEAQRYGF	9	Unmodified	_FSEAQRYGF_					0	0	0		ENST00000573520.5_1_16:4521405-4524561:-|nuORF	ENST00000573520.5_1_16:4521405-4524561:-|nuORF	ENST00000573520.5_1_16:4521405-4524561:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.75927734375	2	552.759081	1103.50361	-0.13811	-7.6341E-05	1.3897	0.00076816	1.2516	0.00069182	552.7591759764422	53.621	0.70815	54.035	53.745	54.453	0.4139					34	16	3	0	0	0	0.10807	1	5429	5429		90.777	3.0802	1	1028600			9499	14020	6676	6684	10975	10975					-0.04400304596242677
FSEEKISWTTK	11	Unmodified	_FSEEKISWTTK_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.5652770996094	3	452.566237	1354.67688	0.96065	0.00043476	-2.9923	-0.0013542	-2.0316	-0.00091944	452.5648328519949	17.735	0.69533	17.811	17.602	18.298	0.075441					55	22	4	0	0	0	0.70278	1	202	202		31.068	0	1	433450			9500	7038	6677	6685	10976	10976					0.01373016669504068
FSEGGERLL	9	Unmodified	_FSEGGERLL_					0	0	0		ENSG00000185650|ENST00000439696|ZFP36L1;ENST00000555997.1_1_14:69256252-69257717:-|nuORF	ENSG00000185650|ENST00000439696|ZFP36L1	ENSG00000185650|ENST00000439696|ZFP36L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.2606201171875	2	504.261456	1006.50836	-0.50258	-0.00025343	0.019831	1E-05	-0.48275	-0.00024343	504.261306298907	49.305	0.73626	49.765	49.419	50.155	0.45983					41	17	4	0	0	0	0.076066	3	4790	4790;4800;4814		98.582	12.034	1	1836700			9501	7731	6678	6686	10977;10978;10979	10977					0.00536579546530902
FSEGGERLL	9	Unmodified	_FSEGGERLL_					0	0	0		ENSG00000185650|ENST00000439696|ZFP36L1;ENST00000555997.1_1_14:69256252-69257717:-|nuORF	ENSG00000185650|ENST00000439696|ZFP36L1	ENSG00000185650|ENST00000439696|ZFP36L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.26019287109375	2	504.261456	1006.50836	1.0327	0.00052073	-1.6609	-0.00083754	-0.62826	-0.00031681	504.2604718950867	49.14	0.77045	50.045	49.725	50.496	0.90424					40	18	3	0	0	0	0.10914	2	4778	4778;4802		90.601	8.3603	1	1821000			9502	7731	6678	6686	10980;10981	10980					0.00536579546530902
FSEISKLLM	9	Unmodified	_FSEISKLLM_					0	0	0		ENST00000488149.5_1_3:182910742-182941939:-|nuORF;nc|ENSG00000053524|Q86YR7-4|MCF2L2;ENSG00000053524|ENST00000328913|MCF2L2	ENST00000488149.5_1_3:182910742-182941939:-|nuORF	ENST00000488149.5_1_3:182910742-182941939:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2875366210938	2	534.293911	1066.57327	-1.3978	-0.00074681	2.9771	0.0015907	1.5794	0.00084386	534.2953730842066	88.375	2.1548	88.845	87.985	90.139	0.47068					103	52	2	0	0	0	0.20789	1	10592	10592		20.947	0	1	507290			9503	1009	6679	6687	10982	10982					0.04264438028144468
FSEISKLLM	9	Unmodified	_FSEISKLLM_					0	0	0		ENST00000488149.5_1_3:182910742-182941939:-|nuORF;nc|ENSG00000053524|Q86YR7-4|MCF2L2;ENSG00000053524|ENST00000328913|MCF2L2	ENST00000488149.5_1_3:182910742-182941939:-|nuORF	ENST00000488149.5_1_3:182910742-182941939:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	534.293911	1066.57327	-0.043294	-2.3132E-05	1.4973	0.00079999	1.454	0.00077686	534.29465512738	88.545	3.4052	88.614	87.358	90.763	0.068161	-0.010461	-7.9177E-05	NaN	20.947	141	79	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	470180			9504	1009	6679	6687							0.04264438028144468
FSEISKLLM	9	Unmodified	_FSEISKLLM_					0	0	0		ENST00000488149.5_1_3:182910742-182941939:-|nuORF;nc|ENSG00000053524|Q86YR7-4|MCF2L2;ENSG00000053524|ENST00000328913|MCF2L2	ENST00000488149.5_1_3:182910742-182941939:-|nuORF	ENST00000488149.5_1_3:182910742-182941939:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	534.293911	1066.57327	1.9216	0.0010267	-1.4997	-0.00080128	0.42195	0.00022545	534.2935748911758	88.569	3.2534	88.495	87.423	90.676	-0.073997	-0.12914	-0.0032817	NaN	20.947	183	76	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	453820			9505	1009	6679	6687							0.04264438028144468
FSEISKLLM	9	Unmodified	_FSEISKLLM_					0	0	0		ENST00000488149.5_1_3:182910742-182941939:-|nuORF;nc|ENSG00000053524|Q86YR7-4|MCF2L2;ENSG00000053524|ENST00000328913|MCF2L2	ENST00000488149.5_1_3:182910742-182941939:-|nuORF	ENST00000488149.5_1_3:182910742-182941939:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	534.293911	1066.57327	0.72795	0.00038894	0.61563	0.00032893	1.3436	0.00071787	534.2941828355348	88.565	3.2008	88.715	87.555	90.756	0.15054	0.091005	-0.0010213	NaN	20.947	137	75	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	511660			9506	1009	6679	6687							0.04264438028144468
FSEISKLLM	9	Unmodified	_FSEISKLLM_					0	0	0		ENST00000488149.5_1_3:182910742-182941939:-|nuORF;nc|ENSG00000053524|Q86YR7-4|MCF2L2;ENSG00000053524|ENST00000328913|MCF2L2	ENST00000488149.5_1_3:182910742-182941939:-|nuORF	ENST00000488149.5_1_3:182910742-182941939:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	534.293911	1066.57327	0.78806	0.00042106	0.97475	0.0005208	1.7628	0.00094186	534.2942488472544	88.284	2.2596	88.733	87.851	90.111	0.44893	0.10917	-0.00063755	NaN	20.947	106	54	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	478560			9507	1009	6679	6687							0.04264438028144468
FSENERLI	8	Unmodified	_FSENERLI_					0	0	0		ENST00000502732.5_1_1:179076600-179076849:-|nuORF	ENST00000502732.5_1_1:179076600-179076849:-|nuORF	ENST00000502732.5_1_1:179076600-179076849:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.2613830566406	2	504.261456	1006.50836	1.0327	0.00052073	-1.6609	-0.00083754	-0.62826	-0.00031681	504.2604718950867	49.14	0.77045	50.045	49.725	50.496	0.90424					40	18	3	0	0	0	0.38462	1	4789	4789		93.195	0.052222	1	1821000			9508	12861	6680	6688	10983	10983					0.00536579546530902
FSEPGITFPL	10	Unmodified	_FSEPGITFPL_					0	0	0		ENST00000421997.5_1_1:95145158-95285609:-|nuORF	ENST00000421997.5_1_1:95145158-95285609:-|nuORF	ENST00000421997.5_1_1:95145158-95285609:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.28759765625	2	554.289682	1106.56481	-1.378	-0.00076384	-1.117	-0.00061917	-2.4951	-0.001383	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.74274	1	2325	2325		42.396	4.5846	1	328550			9509	11474	6681	6689	10984	10984					0.01579207383178982
FSFCLRTR	8	Unmodified	_FSFCLRTR_					0	0	0			REV__ENST00000455810.5_1_10:6624113-6625881:+|nuORF	REV__ENST00000455810.5_1_10:6624113-6625881:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.9569091796875	2	515.268561	1028.52257	1.2047	0.00062075	1.2762	0.00065761	2.4809	0.0012784	515.2691434122902	89.563	0.78956	90.014	89.323	90.113	0.45058					24	18	2	0	0	0	0.4196	1	10558	10558		40.573	26.435	1	128800	+		9510	26948	6682	6690	10985	10985					0.00944953493808498
FSFCLRTR	8	Unmodified	_FSFCLRTR_					0	0	0			REV__ENST00000455810.5_1_10:6624113-6625881:+|nuORF	REV__ENST00000455810.5_1_10:6624113-6625881:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	515.268561	1028.52257	0.79287	0.00040854	1.5968	0.00082276	2.3896	0.0012313	515.269236067311	90.136	2.1388	90.183	88.965	91.103	0.047096	0.084567	1.8092E-05	NaN	40.573	122	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254480	+		9511	26948	6682	6690							0.00944953493808498
FSFDYYAF	8	Unmodified	_FSFDYYAF_					0	0	0		ENSG00000206527|ENST00000383657|HACD2	ENSG00000206527|ENST00000383657|HACD2	ENSG00000206527|ENST00000383657|HACD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.227783203125	2	530.226551	1058.43855	0.38077	0.00020189	2.634	0.0013966	3.0148	0.0015985	530.2278276884957	29.363	0.92472	29.394	29.053	29.978	0.030947					58	28	3	0	0	0	0.91005	1	1429	1429		42.474	9.662	1	251920			9512	8558	6683	6691	10986	10986					-0.0883329912210229
FSFPCPESY	9	Unmodified	_FSFPCPESY_					0	0	0			REV__ENSG00000176009|ENST00000531618|ASCL3	REV__ENSG00000176009|ENST00000531618|ASCL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.724609375	2	538.723318	1075.43208	-0.54815	-0.0002953	2.9358	0.0015816	2.3877	0.0012863	538.7248489829792	71.283	0.70205	71.83	71.574	72.276	0.54756					45	16	4	0	0	0	0.15928	1	7961	7961		82.305	11.009	1	688920	+		9513	22096	6684	6692	10987	10987					-0.1026156034511132
FSFSLHPLTVL	11	Unmodified	_FSFSLHPLTVL_					0	0	0		ENST00000525451.6_2_11:65622593-65622791:-|nuORF	ENST00000525451.6_2_11:65622593-65622791:-|nuORF	ENST00000525451.6_2_11:65622593-65622791:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.8511962890625	2	630.852981	1259.69141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.456	1	60.442	59.942	60.942	-0.013729								0	0	0	0.56276	1	5593	5593		51.193	9.7661	1				9514	13237	6685	6693	10988	10988					0.07195133608320248
FSFVNQSWA	9	Unmodified	_FSFVNQSWA_					0	0	0		ENSG00000158481|ENST00000368170|CD1C	ENSG00000158481|ENST00000368170|CD1C	ENSG00000158481|ENST00000368170|CD1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.256103515625	2	543.256174	1084.49779	-1.4281	-0.00077585	0.80716	0.0004385	-0.62098	-0.00033735	543.2566042477043	29.448	0.69127	29.419	29.127	29.818	-0.029207					31	15	3	0	0	0	0.77244	1	1865	1865		32.812	0	1	194910			9515	5482	6686	6694	10989	10989					-0.04107403107900609
FSFVNQSWA	9	Unmodified	_FSFVNQSWA_					0	0	0		ENSG00000158481|ENST00000368170|CD1C	ENSG00000158481|ENST00000368170|CD1C	ENSG00000158481|ENST00000368170|CD1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.2540283203125	2	543.256174	1084.49779	0.14565	7.9126E-05	-0.98023	-0.00053252	-0.83458	-0.00045339	543.2556211966155	29.557	0.64093	29.468	29.276	29.917	-0.089544					24	14	2	0	0	0	0.58668	1	1887	1887		47.657	7.0847	1	294400			9516	5482	6686	6694	10990	10990					-0.04107403107900609
FSFVSCQLIL	10	Unmodified	_FSFVSCQLIL_					0	0	0			REV__ENST00000519374.5_1_5:172461426-172461564:+|nuORF	REV__ENST00000519374.5_1_5:172461426-172461564:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.8104858398438	2	578.807185	1155.59982	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.62	1	110.67	110.17	111.17	0.054062								0	0	0	0.45132	1	13387	13387		32.812	2.3088	1		+		9517	28080	6687	6695	10991	10991					0.02824126919495029
FSFYMQVKL	9	Unmodified	_FSFYMQVKL_					0	0	0		ENST00000517643.1_1_5:67513506-67522204:+|nuORF	ENST00000517643.1_1_5:67513506-67522204:+|nuORF	ENST00000517643.1_1_5:67513506-67522204:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.8036499023438	2	581.801903	1161.58925	0.55662	0.00032384	2.8774	0.0016741	3.434	0.0019979	581.8034623871067	64.587	0.91196	64.711	64.307	65.219	0.12396					103	32	4	0	0	0	0.15959	1	5725	5725		82.241	10.363	1	1348900			9518	13102	6688	6696	10992	10992					0.014921442650575045
FSGGGGGA	8	Unmodified	_FSGGGGGA_					0	0	0		ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.2813110351562	1	609.262716	608.255439	-1.0506	-0.00064008	-2.5461	-0.0015512	-3.5967	-0.0021913	609.2612170571216	71.188	0.73055	71.226	70.811	71.541	0.038055					63	39	2	0	0	0	0.4196	1	6792	6792		3.9852	0	1	118630			9519	2644	6689	6697	10993	10993					-0.06435808393234765
FSGNKALLYK	10	Unmodified	_FSGNKALLYK_					0	0	0		ENST00000566542.5_1_16:15131890-15138296:-|nuORF;ENSG00000157045|ENST00000287706|NTAN1	ENST00000566542.5_1_16:15131890-15138296:-|nuORF	ENST00000566542.5_1_16:15131890-15138296:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	571.326171875	2	570.824224	1139.63389	-0.23349	-0.00013328	0.40239	0.00022969	0.1689	9.6412E-05	570.8242504843668	61.573	0.86258	61.603	61.338	62.201	0.029575					86	37	3	0	0	0	0.86587	1	5739	5739		29.17	1.2878	1	572170			9520	5407	6690	6698	10994	10994					0.06966291402750358
FSGRRERLL	9	Unmodified	_FSGRRERLL_					0	0	0		ENSG00000116183|ENST00000367662|PAPPA2;nc|ENSG00000116183|Q9BXP8-2|PAPPA2	ENSG00000116183|ENST00000367662|PAPPA2	ENSG00000116183|ENST00000367662|PAPPA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3314208984375	2	567.330539	1132.64652	-1.3958	-0.00079187	0.45547	0.0002584	-0.94031	-0.00053347	567.3306768153905	113.32	5.91	113.27	113.24	119.15	-0.044777					245	138	3	0	0	0	0.7932	1	12807	12807		23.042	0.46283	1	1691900			9521	2906	6691	6699	10995	10995					0.0855074758567298
FSGTIITT	8	Unmodified	_FSGTIITT_					0	0	0		nc|ENSG00000182450|Q9NYG8-2|KCNK4;ENSG00000182450|ENST00000422670|KCNK4	nc|ENSG00000182450|Q9NYG8-2|KCNK4	nc|ENSG00000182450|Q9NYG8-2|KCNK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2277526855469	2	420.229094	838.443634	0.089833	3.775E-05	-2.9174	-0.001226	-2.8276	-0.0011882	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.884	1	7865	7865		33.516	4.366	1	888480			9522	15140	6692	6700	10996	10996					0.017950047405179248
FSGVDELYHVC	11	Unmodified	_FSGVDELYHVC_					0	0	0			REV__nc|ENSG00000152904|O95749-2|GGPS1	REV__nc|ENSG00000152904|O95749-2|GGPS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.7833862304688	2	634.784438	1267.55432	1.2636	0.00080211	-1.8065	-0.0011467	-0.54289	-0.00034462	634.783220093659	30.685	0.43643	30.689	30.491	30.928	0.0037212					24	9	4	0	0	0	0.68378	1	2031	2031		34.173	24.467	1	472030	+		9523	20320	6693	6701	10997	10997					-0.06875143333559208
FSHHAVIS	8	Unmodified	_FSHHAVIS_					0	0	0		ENSG00000168135|ENST00000303592|KCNJ4	ENSG00000168135|ENST00000303592|KCNJ4	ENSG00000168135|ENST00000303592|KCNJ4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2320861816406	2	449.232502	896.450451	-1.619	-0.00072729	-2.5262	-0.0011349	-4.1452	-0.0018622	449.23133844286133	83.319	3.7519	83.457	82.118	85.87	0.13811					166	86	3	0	0	0	0.884	1	8028	8028		33.516	1.5607	1	160270			9524	6375	6694	6702	10998	10998					-0.0019163758823879107
FSHQSDGVIL	10	Unmodified	_FSHQSDGVIL_					0	0	0			REV__ENST00000497929.1_1_3:124951187-125011317:-|nuORF	REV__ENST00000497929.1_1_3:124951187-125011317:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.75732421875	2	551.780013	1101.54547	0.57854	0.00031923	-0.99924	-0.00055136	-0.4207	-0.00023213	551.7796382796824	58.396	0.34493	58.365	58.25	58.595	-0.030888					15	9	2	0	0	0	0.37624	1	5456	5456		14.865	0	1	57629	+		9525	20984	6695	6703	10999	10999					-0.0012374890768569458
FSHRIPLL	8	Unmodified	_FSHRIPLL_					0	0	0		ENSG00000166828|ENST00000300061|SCNN1G	ENSG00000166828|ENST00000300061|SCNN1G	ENSG00000166828|ENST00000300061|SCNN1G	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7962951660156	2	491.795269	981.575986	-2.0878	-0.0010268	2.9764	0.0014638	0.88855	0.00043698	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.90465	1	5052	5052		40.573	0	1	1484300			9526	6235	6696	6704	11000	11000					0.08446074267999393
FSHRIPLL	8	Unmodified	_FSHRIPLL_					0	0	0		ENSG00000166828|ENST00000300061|SCNN1G	ENSG00000166828|ENST00000300061|SCNN1G	ENSG00000166828|ENST00000300061|SCNN1G	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7952575683594	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.541	1	59.574	59.074	60.074	0.032822								0	0	0	0.29452	1	5504	5504		33.516	6.7195	1				9527	6235	6696	6704	11001	11001					0.08446074267999393
FSHRIPLL	8	Unmodified	_FSHRIPLL_					0	0	0		ENSG00000166828|ENST00000300061|SCNN1G	ENSG00000166828|ENST00000300061|SCNN1G	ENSG00000166828|ENST00000300061|SCNN1G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7959899902344	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.84341	1	3902	3902		24.203	1.1603	1	1219600			9528	6235	6696	6704	11002	11002					0.08446074267999393
FSHVWILFV	9	Unmodified	_FSHVWILFV_					0	0	0		ENSG00000136932|ENST00000375119|TRMO	ENSG00000136932|ENST00000375119|TRMO	ENSG00000136932|ENST00000375119|TRMO	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3198852539062	2	574.318577	1146.6226	-0.44784	-0.0002572	2.1191	0.0012171	1.6713	0.00095986	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.76402	1	9400	9400		35.201	1.0282	1	1099700			9529	4160	6697	6705	11003	11003					0.05515514099261054
FSHVYFHHWQI	11	Unmodified	_FSHVYFHHWQI_					0	0	0		ENST00000451333.1_1_2:71037932-71038202:-|nuORF	ENST00000451333.1_1_2:71037932-71038202:-|nuORF	ENST00000451333.1_1_2:71037932-71038202:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.90972900390625	3	500.910561	1499.70985	-0.066911	-3.3516E-05	-0.89772	-0.00044968	-0.96463	-0.00048319	500.90998714264964	65.125	1.1028	65.13	64.574	65.676	0.0046997					144	41	5	0	0	0	0.62914	2	6131	6104;6131		41.08	17.702	1	1809900			9530	11901	6698	6706	11004;11005	11005					-0.02001311697085839
FSHVYFHHWQI	11	Unmodified	_FSHVYFHHWQI_					0	0	0		ENST00000451333.1_1_2:71037932-71038202:-|nuORF	ENST00000451333.1_1_2:71037932-71038202:-|nuORF	ENST00000451333.1_1_2:71037932-71038202:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.9103698730469	3	500.910561	1499.70985	-0.21664	-0.00010852	-0.85176	-0.00042666	-1.0684	-0.00053517	500.910022560047	64.98	1.0359	64.945	64.44	65.476	-0.034798					137	37	5	0	0	0	0.71207	1	6220	6220		29.551	0.97402	1	1951400			9531	11901	6698	6706	11006	11006					-0.02001311697085839
FSHVYFHHWQI	11	Unmodified	_FSHVYFHHWQI_					0	0	0		ENST00000451333.1_1_2:71037932-71038202:-|nuORF	ENST00000451333.1_1_2:71037932-71038202:-|nuORF	ENST00000451333.1_1_2:71037932-71038202:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.9100341796875	3	500.910561	1499.70985	-1.7493	-0.00087627	0.62272	0.00031193	-1.1266	-0.00056434	500.91080383390045	64.943	1.039	64.97	64.439	65.478	0.027145					142	37	5	0	0	0	0.71803	2	6111	6111;6188		28.577	2.3457	1	1793600			9532	11901	6698	6706	11007;11008	11007					-0.02001311697085839
FSIKGDKNRD	10	Unmodified	_FSIKGDKNRD_					0	0	0			REV__nc|ENSG00000102024|P13797-3|PLS3	REV__nc|ENSG00000102024|P13797-3|PLS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.3108520507812	2	590.309469	1178.60439	-0.45326	-0.00026756	0.67408	0.00039792	0.22083	0.00013036	590.309789757865	32.515	0.5012	32.526	32.269	32.77	0.010899					34	13	3	0	0	0	0.76096	1	1837	1837		41.427	8.6761	1	121810	+		9533	17320	6699	6707	11009	11009					0.022227273866064934
FSIKRSSQKL	10	Unmodified	_FSIKRSSQKL_					0	0	0		nc|ENSG00000123473|Q15468|STIL;ENSG00000123473|ENST00000371877|STIL	nc|ENSG00000123473|Q15468|STIL	nc|ENSG00000123473|Q15468|STIL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8557739257812	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.83456	1	9536	9536		37.508	7.1905	1	18777000			9534	3275	6700	6708	11010	11010					0.10416767697097384
FSINGLMIKQL	11	Oxidation (M)	_FSINGLM(Oxidation (M))IKQL_		FSINGLM(1)IKQL		FSINGLM(44)IKQL	0	0	1		nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3590087890625	2	640.357573	1278.70059	0.92817	0.00059436	1.0646	0.00068171	1.9928	0.0012761	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.60058	1	10382	10382		44.377	9.2252	1	603720			9535	14976	6701	6709	11011	11011		216			0.07239158902325471
FSIRYTKLA	9	Unmodified	_FSIRYTKLA_					0	0	0			REV__ENSG00000132952|ENST00000255304|USPL1	REV__ENSG00000132952|ENST00000255304|USPL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.80908203125	2	549.818941	1097.62333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.321	1	16.321	15.821	16.821	0								0	0	0	0.31437	1	113	113		25.574	9.1009	1		+		9536	19046	6702	6710	11012	11012					0.07842308748331561
FSITKQET	8	Unmodified	_FSITKQET_					0	0	0			REV__ENSG00000172324|ENST00000302040|OR5A2	REV__ENSG00000172324|ENST00000302040|OR5A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	477.2482604980469	2	477.250557	952.486562	0.25766	0.00012297	1.7276	0.00082451	1.9853	0.00094748	477.25150035246503	30.131	0.72231	30.156	29.925	30.648	0.025013					30	18	3	0	0	0	0.86791	1	1540	1540		28.254	0	1	42591	+		9537	21818	6703	6711	11013	11013					0.008417747979478918
FSKCVHFK	8	Unmodified	_FSKCVHFK_					0	0	0			REV__ENSG00000146858|ENST00000275766|ZC3HAV1L	REV__ENSG00000146858|ENST00000275766|ZC3HAV1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.28509521484375	2	498.260205	994.505857	1.3418	0.00066856	1.9455	0.00096936	3.2873	0.0016379	498.2610196021831	27.388	0.5555	27.134	26.855	27.411	-0.25465					17	12	2	0	0	0	0.4196	1	1604	1604		52.937	26.141	1	52323	+		9538	20038	6704	6712	11014	11014					0.008384526078657473
FSKDWCGAG	9	Carbamidomethyl (C)	_FSKDWC(Carbamidomethyl (C))GAG_	FSKDWC(1)GAG		FSKDWC(61)GAG		0	1	0		ENST00000374601.7_1_1:23730426-23730582:-|nuORF	ENST00000374601.7_1_1:23730426-23730582:-|nuORF	ENST00000374601.7_1_1:23730426-23730582:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	514.2196655273438	2	514.218734	1026.42292	0.17522	9.01E-05	2.2972	0.0011813	2.4724	0.0012714	514.2198257840964	29.643	0.73442	29.755	29.411	30.145	0.11225					77	36	3	0	0	0	0.35373	1	1275	1275		60.972	6.1956	1	329930			9539	10783	6705	6713	11015	11015	137				-0.08923908910787759
FSKGEHYC	8	Carbamidomethyl (C)	_FSKGEHYC(Carbamidomethyl (C))_	FSKGEHYC(1)		FSKGEHYC(56)		0	1	0			REV__ENST00000462822.1_1_10:45465650-45477981:+|nuORF	REV__ENST00000462822.1_1_10:45465650-45477981:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.219482421875	2	514.218734	1026.42292	0.50193	0.0002581	2.1544	0.0011078	2.6564	0.0013659	514.2197648962526	29.818	0.62395	29.829	29.546	30.17	0.01123					67	30	3	0	0	0	0.9295	1	1288	1288		55.504	6.0627	1	299690	+		9540	17660	6706	6714	11016	11016	229				-0.08923908910810496
FSKKCHLILHK	11	Unmodified	_FSKKCHLILHK_					0	0	0		ENSG00000204519|ENST00000282296|ZNF551;nc|ENSG00000204519|Q7Z340-2|ZNF551;nc|ENSG00000204519|Q7Z340-3|ZNF551	ENSG00000204519|ENST00000282296|ZNF551	ENSG00000204519|ENST00000282296|ZNF551	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.93316650390625	3	451.932309	1352.7751	0.82688	0.0003737	-0.0088081	-3.9807E-06	0.81808	0.00036972	451.9322387117762	100.27	1.763	100.6	99.729	101.49	0.33295					121	44	4	0	0	0	0.74002	1	12121	12121		24.276	2.4955	1	816050			9541	8451	6707	6715	11017	11017					0.112819665043844
FSKKSHLIIH	10	Unmodified	_FSKKSHLIIH_					0	0	0		ENSG00000136866|ENST00000374227|ZFP37;nc|ENSG00000136866|Q9Y6Q3-3|ZFP37;nc|ENSG00000136866|Q9Y6Q3-2|ZFP37	ENSG00000136866|ENST00000374227|ZFP37	ENSG00000136866|ENST00000374227|ZFP37	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2327880859375	3	403.908269	1208.70298	2.8951	0.0011694	-1.3642	-0.000551	1.5309	0.00061836	403.9082390810849	85.378	0.26265	85.436	85.239	85.501	0.057899					8	5	2	0	0	0	0.37624	1	8664	8664		29.17	11.702	1	24626			9542	4146	6708	6716	11018	11018					0.10697375422319055
FSKLDPKVK	9	Unmodified	_FSKLDPKVK_					0	0	0		nc|ENSG00000035928|P35251|RFC1;ENSG00000035928|ENST00000349703|RFC1	nc|ENSG00000035928|P35251|RFC1	nc|ENSG00000035928|P35251|RFC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.3180541992188	2	531.321317	1060.62808	-0.033063	-1.7567E-05	-3.6466	-0.0019375	-3.6797	-0.0019551	531.3191547732448	95.172	2.5483	95.24	94.714	97.262	0.068336					181	59	5	0	0	0	0.78912	1	10020	10020		28.081	3.5623	1	3878900			9543	900	6709	6717	11019	11019					0.1001919289108173
FSKLKEKFMN	10	Unmodified	_FSKLKEKFMN_					0	0	0		chr12:79103055-79217503|21|27.9|0.16|7.43|+|ENST00000551304|SYT1,SYT1;chr12:79047362-79103014|31|24.45|0.14|7.49|+|ENST00000551304|SYT1,SYT1;chr12:79046451-79047297|23|13.17|0.68|4.28|+|ENST00000446242|SYT1,SYT1;ENSG00000067715|ENST00000261205|SYT1;chr12:79045826-79047297|14|13.36|0.83|4.01|+|ENST00000552744|SYT1,SYT1	chr12:79103055-79217503|21|27.9|0.16|7.43|+|ENST00000551304|SYT1,SYT1	chr12:79103055-79217503|21|27.9|0.16|7.43|+|ENST00000551304|SYT1,SYT1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	636.3436889648438	2	636.344466	1270.67438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.154	1	60.271	59.771	60.771	0.11676								0	0	0	0.45132	1	5200	5200		31.53	1.2121	1				9544	145	6710	6718	11020	11020					0.04986889730867006
FSKMIYRNYFE	11	Unmodified	_FSKMIYRNYFE_					0	0	0			REV__nc|ENSG00000100796|Q6IN85-2|PPP4R3A	REV__nc|ENSG00000100796|Q6IN85-2|PPP4R3A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.91259765625	3	499.91135	1496.71222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.176	1	20.247	19.747	20.747	0.071127								0	0	0	0.56276	1	464	464		35.178	13.398	1		+		9545	17220	6711	6719	11021	11021					-0.0162664407430384
FSKPLIIKQNR	11	Unmodified	_FSKPLIIKQNR_					0	0	0			REV__ENST00000474234.5_1_2:112995906-112996044:-|nuORF	REV__ENST00000474234.5_1_2:112995906-112996044:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.9441223144531	3	448.610111	1342.8085	-1.309	-0.00058724	-0.26888	-0.00012062	-1.5779	-0.00070786	448.60976401690687	76.777	1.1377	76.902	76.414	77.552	0.12485					110	49	3	0	0	0	0.74405	1	7214	7214		23.378	3.3474	1	879130	+		9546	27296	6712	6720	11022	11022					0.15081291547926412
FSKPLIIKQNR	11	Unmodified	_FSKPLIIKQNR_					0	0	0			REV__ENST00000474234.5_1_2:112995906-112996044:-|nuORF	REV__ENST00000474234.5_1_2:112995906-112996044:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.6127014160156	3	448.610111	1342.8085	-1.3856	-0.00062161	-0.42513	-0.00019072	-1.8108	-0.00081233	448.609746420413	76.801	0.97182	76.89	76.464	77.435	0.089363					88	45	3	0	0	0	0.76892	1	7206	7206		17.833	0	1	651130	+		9547	27296	6712	6720	11023	11023					0.15081291547926412
FSKPQGRRQ	9	Unmodified	_FSKPQGRRQ_					0	0	0		chr16:89513111-89560940|20|93.45|0.0|23.16|+|0|None,RPL13|1	chr16:89513111-89560940|20|93.45|0.0|23.16|+|0|None,RPL13|1	chr16:89513111-89560940|20|93.45|0.0|23.16|+|0|None,RPL13|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3065185546875	2	552.307064	1102.59957	2.2801	0.0012593	-3.3671	-0.0018597	-1.087	-0.00060038	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.77696	1	9739	9739		31.53	2.3598	1	1797400			9548	209	6713	6721	11024	11024					0.052378880345031575
FSKPQGRRQ	9	Unmodified	_FSKPQGRRQ_					0	0	0		chr16:89513111-89560940|20|93.45|0.0|23.16|+|0|None,RPL13|1	chr16:89513111-89560940|20|93.45|0.0|23.16|+|0|None,RPL13|1	chr16:89513111-89560940|20|93.45|0.0|23.16|+|0|None,RPL13|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3060913085938	2	552.307064	1102.59957	1.2817	0.0007079	-2.5363	-0.0014008	-1.2546	-0.00069293	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.7932	1	9783	9783		25.574	1.3713	1	1712700			9549	209	6713	6721	11025	11025					0.052378880345031575
FSKQIKEPI	9	Unmodified	_FSKQIKEPI_					0	0	0			REV__ENSG00000187754|ENST00000298181|SSX7	REV__ENSG00000187754|ENST00000298181|SSX7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.3326416015625	2	545.318774	1088.623	0.16897	9.2145E-05	-3.211	-0.001751	-3.042	-0.0016589	545.3165534684148	98.556	0.98933	98.784	98.303	99.292	0.22788					43	22	3	0	0	0	0.20789	1	10177	10177		19.997	8.4858	1	90306	+		9550	22942	6714	6722	11026	11026					0.08222889028479585
FSKRYLKY	8	Unmodified	_FSKRYLKY_					0	0	0		ENSG00000116251|ENST00000234875|RPL22;ENSG00000163584|ENST00000295830|RPL22L1;ENST00000484916.1_1_14:19468684-19468777:+|nuORF;ENST00000469811.1_1_14:77352823-77353039:-|nuORF	ENSG00000116251|ENST00000234875|RPL22	ENSG00000116251|ENST00000234875|RPL22	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.7836303710938	2	552.813659	1103.61277	-0.94229	-0.00052091	-2.1545	-0.001191	-3.0968	-0.0017119	552.8120479942868	74.104	0.20683	74.495	74.375	74.582	0.3911					6	4	2	0	0	0	0.4196	1	8338	8338		51.335	17.82	1	63827			9551	2910	6715	6723	11027	11027					0.06510326093894037
FSKTVFFI	8	Unmodified	_FSKTVFFI_					0	0	0		ENST00000274458.8_1_5:115628182-115628326:+|nuORF	ENST00000274458.8_1_5:115628182-115628326:+|nuORF	ENST00000274458.8_1_5:115628182-115628326:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.77978515625	2	494.778754	987.542954	-0.075058	-3.7137E-05	3.0403	0.0015043	2.9653	0.0014672	494.7801083626478	84.098	2.6315	84.165	82.573	85.204	0.067001					119	60	3	0	0	0	0.87479	1	8395	8395		30.504	2.6214	1	230560			9552	9588	6716	6724	11028	11028					0.04868447425292288
FSLAKLKH	8	Unmodified	_FSLAKLKH_					0	0	0		nc|ENSG00000197617|Q7Z5H4|VN1R5	nc|ENSG00000197617|Q7Z5H4|VN1R5	nc|ENSG00000197617|Q7Z5H4|VN1R5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2876892089844	2	472.28982	942.565087	-0.108	-5.1006E-05	-4.4569	-0.0021049	-4.5649	-0.0021559	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.84341	1	10338	10338		24.203	2.2429	1	46909000			9553	15194	6717	6725	11029	11029					0.09150671893689832
FSLDLKLIIF	10	Unmodified	_FSLDLKLIIF_					0	0	0		ENSG00000184995|ENST00000448696|IFNE	ENSG00000184995|ENST00000448696|IFNE	ENSG00000184995|ENST00000448696|IFNE	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8721313476562	2	604.8681	1207.72165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.74	1	115.72	115.22	116.22	-0.02433								0	0	0	0.45132	1	12813	12813		18.324	1.8513	1				9554	7664	6718	6726	11030	11030					0.12609492273486467
FSLELLFF	8	Unmodified	_FSLELLFF_					0	0	0		nc|ENSG00000154920|Q96AY2-2|EME1	nc|ENSG00000154920|Q96AY2-2|EME1	nc|ENSG00000154920|Q96AY2-2|EME1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2801818847656	2	508.278586	1014.54262	1.4316	0.00072764	1.7891	0.00090938	3.2207	0.001637	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.86791	1	9233	9233		28.254	1.5614	1	1903500			9555	15005	6719	6727	11031	11031					0.03593027705437635
FSLFMREL	8	Oxidation (M)	_FSLFM(Oxidation (M))REL_		FSLFM(1)REL		FSLFM(82)REL	0	0	1			REV__CON__P01966	REV__CON__P01966	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.7702026367188	2	529.770603	1057.52665	0.52899	0.00028025	-0.25093	-0.00013293	0.27807	0.00014731	529.7701667802362	67.166	0.82552	67.293	67.003	67.829	0.12748					76	32	3	0	0	0	0.36381	1	6002	6002		82.305	8.05	1	704470	+	+	9556	15974	6720	6728	11032	11032		229			0.0001899819685604598
FSLFMREL	8	Oxidation (M)	_FSLFM(Oxidation (M))REL_					0	0	1			REV__CON__P01966	REV__CON__P01966	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	529.770603	1057.52665	0.016413	8.6949E-06	0.33531	0.00017764	0.35172	0.00018633	529.7703457991925	67.33	0.82368	67.294	66.922	67.746	-0.03569	-0.018108	-0.0002417	NaN	82.305	74	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	334600	+	+	9557	15974	6720	6728				229			0.0001899819685604598
FSLFMREL	8	Oxidation (M)	_FSLFM(Oxidation (M))REL_					0	0	1			REV__CON__P01966	REV__CON__P01966	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	529.770603	1057.52665	-0.16542	-8.7635E-05	0.3207	0.0001699	0.15528	8.2262E-05	529.7703992752861	67.217	0.71461	67.246	66.911	67.626	0.028587	-0.066353	-0.00025718	NaN	82.305	65	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	388990	+	+	9558	15974	6720	6728				229			0.0001899819685604598
FSLKAIFLLFP	11	Unmodified	_FSLKAIFLLFP_					0	0	0		ENST00000430246.6_1_14:21702260-21731069:-|nuORF	ENST00000430246.6_1_14:21702260-21731069:-|nuORF	ENST00000430246.6_1_14:21702260-21731069:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5978698730469	3	432.59692	1294.76893	2.718	0.0011758	-1.0871	-0.00047029	1.6308	0.00070549	432.59643721162763	106.42	1.1232	106.39	105.97	107.1	-0.036613					90	25	5	0	0	0	0.73621	1	11781	11781		25.126	0	1	14662000			9559	11628	6721	6729	11033	11033					0.13333771544489537
FSLKISLLLH	10	Unmodified	_FSLKISLLLH_					0	0	0		ENSG00000197024|ENST00000475153|ZNF398;nc|ENSG00000197024|Q8TD17-2|ZNF398	ENSG00000197024|ENST00000475153|ZNF398	ENSG00000197024|ENST00000475153|ZNF398	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.8662719726562	2	585.865892	1169.71723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.651	1	26.31	25.81	26.81	-0.34035								0	0	0	0.45132	1	1488	1488		21.96	1.013	1				9560	8125	6722	6730	11034	11034					0.13916027850632418
FSLLRMNVS	9	Oxidation (M)	_FSLLRM(Oxidation (M))NVS_		FSLLRM(1)NVS		FSLLRM(51)NVS	0	0	1		ENST00000373075.6_1_1:37959372-37959444:-|nuORF	ENST00000373075.6_1_1:37959372-37959444:-|nuORF	ENST00000373075.6_1_1:37959372-37959444:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.7841186523438	2	541.786784	1081.55902	-0.22268	-0.00012064	-2.5471	-0.00138	-2.7697	-0.0015006	541.7852590351226	56.903	1.7601	56.891	56.59	58.35	-0.012203					157	62	4	0	0	0	0.51307	1	5241	5241		51.335	6.8044	1	5602900			9561	10727	6723	6731	11035	11035		175			0.021497855998632076
FSLQFLFSLI	10	Unmodified	_FSLQFLFSLI_					0	0	0			REV__nc|ENSG00000213780|Q92759-2|GTF2H4	REV__nc|ENSG00000213780|Q92759-2|GTF2H4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5648193359375	3	405.565509	1213.6747	-1.5366	-0.00062318	-0.10113	-4.1013E-05	-1.6377	-0.00066419	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.86587	1	5585	5585		29.17	5.7921	1	187890	+		9562	23632	6724	6732	11036	11036					0.07640632722382179
FSLQSLGGQL	10	Unmodified	_FSLQSLGGQL_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000037665	REV__CON__ENSEMBL:ENSBTAP00000037665	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.7869262695312	2	525.284931	1048.55531	-0.22613	-0.00011878	0.2527	0.00013274	0.026575	1.3959E-05	525.2848756806804	51.568	0.4157	51.544	51.325	51.741	-0.02343					16	9	2	0	0	0	0.82886	1	4523	4523		37.812	2.1932	1	94540	+	+	9563	15968	6725	6733	11037	11037					0.03297439097673305
FSLSGVAFLL	10	Unmodified	_FSLSGVAFLL_					0	0	0		ENSG00000203910|ENST00000370375|C1orf146	ENSG00000203910|ENST00000370375|C1orf146	ENSG00000203910|ENST00000370375|C1orf146	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3095092773438	2	527.302593	1052.59063	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.95	1	104.21	103.71	104.71	0.26524								0	0	0	0.45132	1	12690	12690		53.351	5.4358	1				9564	8402	6726	6734	11038	11038					0.06644101625465737
FSLVERGVF	9	Unmodified	_FSLVERGVF_					0	0	0			REV__ENST00000378426.5_2_X:40506367-40506781:-|nuORF	REV__ENST00000378426.5_2_X:40506367-40506781:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.800048828125	2	527.290017	1052.56548	0.0098197	5.1778E-06	1.2081	0.000637	1.2179	0.00064217	527.289662260158	61.526	0.58537	62.08	61.843	62.428	0.55386					16	13	2	0	0	0	0.20789	1	6612	6612		39.253	12.56	1	218980	+		9565	22790	6727	6735	11039	11039					0.04130046822888289
FSLVTSEGRNS	11	Unmodified	_FSLVTSEGRNS_					0	0	0			REV__nc|ENSG00000107862|Q92538-3|GBF1	REV__nc|ENSG00000107862|Q92538-3|GBF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.8004150390625	2	598.798934	1195.58332	-0.77717	-0.00046537	4.4174	0.0026452	3.6403	0.0021798	598.8013448272425	63.345	0.56187	63.345	63.143	63.704	0					43	24	2	0	0	0	0.62614	1	5574	5574		41.427	1.3684	1	108740	+		9566	17679	6728	6736	11040	11040					-0.0066528271290735574
FSLWLIKIFV	10	Unmodified	_FSLWLIKIFV_					0	0	0			REV__ENST00000260056.6_1_11:82708357-82745471:-|nuORF	REV__ENST00000260056.6_1_11:82708357-82745471:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5935974121094	3	422.593399	1264.75837	-0.62547	-0.00026432	-0.1029	-4.3486E-05	-0.72838	-0.00030781	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.85633	1	4962	4962		21.686	5.1559	1	1069500	+		9567	24363	6729	6737	11041	11041					0.1365778889005469
FSMPIPTK	8	Unmodified	_FSMPIPTK_					0	0	0			REV__ENSG00000182771|ENST00000327946|GRID1	REV__ENSG00000182771|ENST00000327946|GRID1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.239501953125	2	460.749139	919.483725	1.3579	0.00062565	3.1972	0.0014731	4.5551	0.0020988	460.75047013212316	27.376	0.42683	27.122	26.855	27.282	-0.25465					13	9	2	0	0	0	0.4196	1	1558	1558		11.511	0	1	38611	+		9568	22548	6730	6738	11042	11042					0.02076228139435443
FSNKDQLKNI	10	Unmodified	_FSNKDQLKNI_					0	0	0			REV__nc|ENSG00000091879|O15123-2|ANGPT2	REV__nc|ENSG00000091879|O15123-2|ANGPT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.70538330078125	3	402.887422	1205.64044	1.5444	0.00062221	-0.30824	-0.00012418	1.2361	0.00049803	402.88709402855494	25.515	0.2142	25.258	25.087	25.302	-0.25721					5	4	2	0	0	0	0.37624	1	1310	1310		11.097	0	1	17308	+		9569	17024	6731	6739	11043	11043					0.04584184563486815
FSNKVLNAL	9	Unmodified	_FSNKVLNAL_					0	0	0		nc|ENSG00000120254|Q6UB35-2|MTHFD1L;ENSG00000120254|ENST00000367321|MTHFD1L	nc|ENSG00000120254|Q6UB35-2|MTHFD1L	nc|ENSG00000120254|Q6UB35-2|MTHFD1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	503.79461669921875	2	503.290017	1004.56548	0.80608	0.00040569	2.1927	0.0011036	2.9988	0.0015092	503.2909725186853	109.68	1.4053	109.76	109.44	110.85	0.078552					88	52	3	0	0	0	0.76255	1	11772	11772		35.618	2.8059	1	1533800			9570	3119	6732	6740	11044	11044					0.06338046822895649
FSPGGLAPEI	10	Unmodified	_FSPGGLAPEI_					0	0	0		ENSG00000100385|ENST00000216223|IL2RB	ENSG00000100385|ENST00000216223|IL2RB	ENSG00000100385|ENST00000216223|IL2RB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.6978454589844	2	494.260925	986.507297	-1.2525	-0.00061908	-2.3516	-0.0011623	-3.6042	-0.0017814	494.2595261175969	31.146	1.3123	31.226	30.501	31.814	0.079834					40	29	3	0	0	0	0.37624	1	2119	2119		34.173	0	1	237740			9571	1836	6733	6741	11045	11045					0.01350365177609092
FSPGNAGLLAL	11	Unmodified	_FSPGNAGLLAL_					0	0	0		ENST00000472710.2_1_1:46744539-46744996:-|nuORF	ENST00000472710.2_1_1:46744539-46744996:-|nuORF	ENST00000472710.2_1_1:46744539-46744996:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2931518554688	2	530.295299	1058.57605	-0.034361	-1.8221E-05	-3.4792	-0.001845	-3.5136	-0.0018632	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.5603	1	9221	9221		47.657	5.2612	1	1852900			9572	12266	6734	6742	11046	11046					0.049100294773325004
FSPGNAGLLAL	11	Unmodified	_FSPGNAGLLAL_					0	0	0		ENST00000472710.2_1_1:46744539-46744996:-|nuORF	ENST00000472710.2_1_1:46744539-46744996:-|nuORF	ENST00000472710.2_1_1:46744539-46744996:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2932739257812	2	530.295299	1058.57605	-0.066725	-3.5384E-05	-3.5889	-0.0019032	-3.6556	-0.0019386	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.65746	1	9103	9103		37.812	0.65241	1	2084800			9573	12266	6734	6742	11047	11047					0.049100294773325004
FSPGNAGLLAL	11	Unmodified	_FSPGNAGLLAL_					0	0	0		ENST00000472710.2_1_1:46744539-46744996:-|nuORF	ENST00000472710.2_1_1:46744539-46744996:-|nuORF	ENST00000472710.2_1_1:46744539-46744996:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.293212890625	2	530.295299	1058.57605	0.74166	0.0003933	-4.3452	-0.0023043	-3.6036	-0.001911	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.61369	1	9063	9063		42.864	6.4175	1	2081200			9574	12266	6734	6742	11048	11048					0.049100294773325004
FSPPLPSSLGG	11	Unmodified	_FSPPLPSSLGG_					0	0	0			REV__ENST00000375980.8_1_1:15755901-15756213:+|nuORF	REV__ENST00000375980.8_1_1:15755901-15756213:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7814331054688	2	529.779482	1057.54441	0.6286	0.00033302	1.919	0.0010166	2.5476	0.0013497	529.7805735433727	49.319	1.5468	50.179	49.642	51.189	0.86044					96	37	4	0	0	0	0.58425	1	4838	4838		45.972	3.5761	1	4613700	+		9575	25829	6735	6743	11049	11049					0.017940367234132282
FSPPPLLRARR	11	Unmodified	_FSPPPLLRARR_					0	0	0			REV__ENST00000274853.7_1_6:30654254-30654479:-|nuORF	REV__ENST00000274853.7_1_6:30654254-30654479:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.6027526855469	3	437.266568	1308.77787	-0.68964	-0.00030156	3.497	0.0015291	2.8073	0.0012275	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.74405	1	4942	4942		23.378	2.3457	1	2651700	+		9576	24569	6736	6744	11050	11050					0.13583557953529635
FSPRLAAA	8	Unmodified	_FSPRLAAA_					0	0	0			REV__ENST00000586944.5_1_19:806325-806721:+|nuORF	REV__ENST00000586944.5_1_19:806325-806721:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7368469238281	2	416.73742	831.460287	0.069639	2.9021E-05	-1.362	-0.00056759	-1.2923	-0.00053857	416.7368250474704	38.634	0.86422	38.976	38.537	39.401	0.34187					55	20	4	0	0	0	0.884	1	3181	3181		33.516	1.9858	1	1714900	+		9577	29118	6737	6745	11051	11051					0.037815504171248904
FSPSCDSALY	10	Unmodified	_FSPSCDSALY_					0	0	0			REV__ENST00000467867.1_1_10:99187588-99192278:+|nuORF	REV__ENST00000467867.1_1_10:99187588-99192278:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.22705078125	2	545.231507	1088.44846	0.44189	0.00024093	-0.56171	-0.00030626	-0.11981	-6.5325E-05	545.2310178809672	55.861	0.48043	55.96	55.725	56.206	0.099186					35	18	2	0	0	0	0.71042	1	4713	4713		44.117	6.9577	1	231730	+		9578	27168	6738	6746	11052	11052					-0.09222479179015863
FSPSSSCAGGW	11	Unmodified	_FSPSSSCAGGW_					0	0	0			REV__ENST00000534032.5_1_11:65651447-65652256:-|nuORF	REV__ENST00000534032.5_1_11:65651447-65652256:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.222412109375	2	543.221474	1084.42839	0.52379	0.00028453	3.4261	0.0018612	3.9499	0.0021457	543.2232350717135	26.042	0.74612	26.003	25.689	26.435	-0.038523					29	16	3	0	0	0	0.72918	1	1146	1146		26.693	0.62953	1	58266	+		9579	28361	6739	6747	11053	11053					-0.11044230118955056
FSPSVMCNSSS	11	Unmodified	_FSPSVMCNSSS_					0	0	0			REV__nc|ENSG00000164830|Q8N573-3|OXR1	REV__nc|ENSG00000164830|Q8N573-3|OXR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.2338256835938	2	573.233724	1144.45289	0.69324	0.00039739	-0.67655	-0.00038782	0.016694	9.5696E-06	573.2331643277087	29.173	1.2859	28.999	28.547	29.833	-0.17336					67	29	3	0	0	0	0.66009	1	1888	1888		37.508	4.6958	1	1232400	+		9580	29994	6740	6748	11054	11054					-0.11355338027738071
FSQATVLLH	9	Unmodified	_FSQATVLLH_					0	0	0			REV__ENST00000392973.7_1_16:90075326-90076003:-|nuORF	REV__ENST00000392973.7_1_16:90075326-90076003:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.282470703125	2	508.282192	1014.54983	-0.12807	-6.5097E-05	0.08257	4.1969E-05	-0.045502	-2.3128E-05	508.28210982040144	21.685	0.90281	21.62	21.308	22.211	-0.064743					74	30	3	0	0	0	0.55097	1	666	666		49.442	0	1	261030	+		9581	26038	6741	6749	11055	11055					0.04313760305853975
FSQATVLLH	9	Unmodified	_FSQATVLLH_					0	0	0			REV__ENST00000392973.7_1_16:90075326-90076003:-|nuORF	REV__ENST00000392973.7_1_16:90075326-90076003:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2811584472656	2	508.282192	1014.54983	-0.0026911	-1.3679E-06	0.031136	1.5826E-05	0.028444	1.4458E-05	508.282055825422	21.65	0.96109	21.593	21.341	22.302	-0.057203					83	38	3	0	0	0	0.44421	2	606	606;614		54.776	1.4249	1	252740	+		9582	26038	6741	6749	11056;11057	11056					0.04313760305853975
FSQATVLLH	9	Unmodified	_FSQATVLLH_					0	0	0			REV__ENST00000392973.7_1_16:90075326-90076003:-|nuORF	REV__ENST00000392973.7_1_16:90075326-90076003:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2799987792969	2	508.282192	1014.54983	0.029362	1.4924E-05	-4.2974	-0.0021843	-4.268	-0.0021694	508.2799882081312	26.317	1.2518	26.059	25.682	26.934	-0.2572					83	27	5	0	0	0	0.17307	1	1426	1426		79.451	2.6044	1	2089700	+		9583	26038	6741	6749	11058	11058					0.04313760305853975
FSQFNTFSYI	10	Unmodified	_FSQFNTFSYI_					0	0	0		ENST00000339362.9_1_15:73597096-73597282:+|nuORF	ENST00000339362.9_1_15:73597096-73597282:+|nuORF	ENST00000339362.9_1_15:73597096-73597282:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.2943725585938	2	627.295496	1252.57644	-0.75056	-0.00047082	0.41397	0.00025968	-0.33659	-0.00021114	627.2956538101482	58.735	0.83465	59.127	58.775	59.61	0.39209					45	19	3	0	0	0	0.37206	1	6175	6175		66.429	0	1	2138200			9584	10219	6742	6750	11059	11059					-0.03974595593467711
FSQILSLDF	9	Unmodified	_FSQILSLDF_					0	0	0		nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-5|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7616577148438	2	535.281857	1068.54916	0.4214	0.00022557	-0.36863	-0.00019732	0.052775	2.825E-05	535.2814405767781	50.269	0.53567	50.717	50.431	50.966	0.44761					25	12	3	0	0	0	0.20789	1	4913	4913		15.642	0	1	533310			9585	8070	6743	6751	11060	11060					0.01762920866121931
FSQMRLANF	9	Unmodified	_FSQMRLANF_					0	0	0		chr18:32974681-33211896|18|18.28|0.74|4.63|-|ENST00000581524|CCDC178,CCDC178;nc|ENSG00000166960|Q5BJE1-3|CCDC178;nc|ENSG00000166960|Q5BJE1-4|CCDC178;ENSG00000166960|ENST00000383096|CCDC178;nc|ENSG00000166960|Q5BJE1-2|CCDC178	chr18:32974681-33211896|18|18.28|0.74|4.63|-|ENST00000581524|CCDC178,CCDC178	chr18:32974681-33211896|18|18.28|0.74|4.63|-|ENST00000581524|CCDC178,CCDC178	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	556.9544677734375	2	557.279126	1112.5437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.671	1	60.679	60.179	61.179	0.0081177								0	0	0	0.28386	1	5266	5266		37.159	5.2042	1				9586	251	6744	6752	11061	11061					-0.008070811973539094
FSQQTKIG	8	Unmodified	_FSQQTKIG_					0	0	0			REV__nc|ENSG00000134765|Q08554-2|DSC1	REV__nc|ENSG00000134765|Q08554-2|DSC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	454.74530029296875	2	454.745442	907.476331	-1.7624	-0.00080143	0.73402	0.00033379	-1.0283	-0.00046763	454.7456677884031	103.99	1.1163	104.08	103.63	104.75	0.093857					50	27	3	0	0	0	0.8347	1	10950	10950		23.042	0	1	257420	+		9587	19165	6745	6753	11062	11062					0.01889211863374385
FSQREFYQ	8	Unmodified	_FSQREFYQ_					0	0	0			REV__nc|ENSG00000172738|Q8N7C4|TMEM217	REV__nc|ENSG00000172738|Q8N7C4|TMEM217	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.7584838867188	2	552.759081	1103.50361	-0.15488	-8.5611E-05	-0.075564	-4.1769E-05	-0.23044	-0.00012738	552.7588375859833	49.202	0.92498	49.178	48.619	49.544	-0.024033					46	20	3	0	0	0	0.89962	1	4197	4197		38.806	3.1879	1	174440	+		9588	30031	6746	6754	11063	11063					-0.04400304596265414
FSQSIDPLF	9	Unmodified	_FSQSIDPLF_					0	0	0			REV__ENST00000513040.5_2_5:125695875-125801126:+|nuORF	REV__ENST00000513040.5_2_5:125695875-125801126:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.263427734375	2	527.266207	1052.51786	-0.054608	-2.8793E-05	-3.8128	-0.0020104	-3.8674	-0.0020392	527.2641168910368	56.003	0.50456	56.034	55.689	56.193	0.030838					34	13	3	0	0	0	0.51307	1	5025	5025		51.335	1.3109	1	602480	+		9589	27986	6747	6755	11064	11064					-0.006296521679814759
FSRAEIEF	8	Unmodified	_FSRAEIEF_					0	0	0		ENSG00000155530|ENST00000285928|LRGUK	ENSG00000155530|ENST00000285928|LRGUK	ENSG00000155530|ENST00000285928|LRGUK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7501525878906	2	499.750724	997.486896	0.65803	0.00032885	-1.0324	-0.00051595	-0.37438	-0.0001871	499.75012156502873	51.517	0.7418	52.184	51.895	52.637	0.66729					41	17	4	0	0	0	0.3646	1	5144	5144		85.359	8.5128	1	2614100			9590	5327	6748	6756	11065	11065					-0.011948054821914411
FSRAFSRRRP	10	Unmodified	_FSRAFSRRRP_					0	0	0		nc|ENSG00000140534|Q7Z2Z1-2|TICRR;ENSG00000140534|ENST00000268138|TICRR	nc|ENSG00000140534|Q7Z2Z1-2|TICRR	nc|ENSG00000140534|Q7Z2Z1-2|TICRR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.359130859375	2	640.360162	1278.70577	1.6035	0.0010268	-3.6259	-0.0023219	-2.0224	-0.0012951	640.3577368030512	99.407	2.6879	99.454	98.409	101.1	0.047531					162	62	4	0	0	0	0.85981	1	10603	10603		35.152	2.4015	1	584870			9591	4443	6749	6757	11066	11066					0.0775664359982784
FSRAFSRRRP	10	Unmodified	_FSRAFSRRRP_					0	0	0		nc|ENSG00000140534|Q7Z2Z1-2|TICRR;ENSG00000140534|ENST00000268138|TICRR	nc|ENSG00000140534|Q7Z2Z1-2|TICRR	nc|ENSG00000140534|Q7Z2Z1-2|TICRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3590087890625	2	640.360162	1278.70577	1.5852	0.0010151	-3.7285	-0.0023876	-2.1433	-0.0013725	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.73395	2	10316	10316;10374		42.864	6.4175	1	616450			9592	4443	6749	6757	11067;11068	11067					0.0775664359982784
FSRARPRPVAG	11	Unmodified	_FSRARPRPVAG_					0	0	0			REV__ENST00000529542.1_1_19:46825061-46834596:+|nuORF	REV__ENST00000529542.1_1_19:46825061-46834596:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	607.3471069335938	2	607.349263	1212.68397	-1.2176	-0.00073953	-0.067763	-4.1156E-05	-1.2854	-0.00078069	607.349208826232	30.097	0.60465	30.097	29.793	30.397	0					41	18	3	0	0	0	0.67778	1	1346	1346		35.152	3.6222	1	105210	+		9593	18584	6750	6758	11069	11069					0.0861383885126088
FSRGLKSIKGT	11	Unmodified	_FSRGLKSIKGT_					0	0	0			REV__ENST00000594017.5_1_19:49497156-49513425:+|nuORF	REV__ENST00000594017.5_1_19:49497156-49513425:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3567504882812	2	597.35368	1192.69281	1.5032	0.00089792	2.5027	0.001495	4.0059	0.0023929	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.72106	1	11047	11047		28.081	4.5588	1	1501500	+		9594	22585	6751	6759	11070	11070					0.1041676769705191
FSRILLLFSLT	11	Unmodified	_FSRILLLFSLT_					0	0	0		ENST00000565280.5_1_15:31198658-31229456:+|nuORF;ENSG00000198690|ENST00000362065|FAN1	ENST00000565280.5_1_15:31198658-31229456:+|nuORF	ENST00000565280.5_1_15:31198658-31229456:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2679138183594	3	437.267463	1308.78056	-0.34848	-0.00015238	1.1112	0.00048591	0.76277	0.00033353	437.26783788235974	49.466	1.602	49.926	49.459	51.061	0.45983					122	38	5	0	0	0	0.74344	1	4811	4811		23.514	4.2517	1	4698000			9595	8307	6752	6760	11071	11071					0.1385196856786024
FSRLEKLGL	9	Unmodified	_FSRLEKLGL_					0	0	0		ENST00000476637.5_1_7:139529186-139636014:+|nuORF;nc|ENSG00000059377|P24557-4|TBXAS1;ENSG00000059377|ENST00000448866|TBXAS1;nc|ENSG00000059377|P24557-3|TBXAS1	ENST00000476637.5_1_7:139529186-139636014:+|nuORF	ENST00000476637.5_1_7:139529186-139636014:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.818941	1061.62333	-0.032225	-1.7138E-05	-3.6245	-0.0019276	-3.6567	-0.0019447	531.8169096298473	101.36	0.9939	101.39	101.01	102	0.031036					45	23	3	0	0	0	0.77696	1	10829	10829		31.53	3.6476	1	591860			9596	1051	6753	6761	11072	11072					0.09498308748334239
FSRPTQPK	8	Unmodified	_FSRPTQPK_					0	0	0		ENST00000414083.6_2_6:33289124-33290733:-|nuORF;ENST00000266000.10_2_6:33289121-33289671:-|nuORF	ENST00000414083.6_2_6:33289124-33290733:-|nuORF	ENST00000414083.6_2_6:33289124-33290733:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.7666015625	2	480.766709	959.518865	1.0414	0.00050068	-0.73413	-0.00035294	0.3073	0.00014774	480.7662141752565	35.287	0.87615	35.535	35.242	36.118	0.24769					48	22	4	0	0	0	0.13608	2	2686	2674;2686		113.41	22.216	1	1786000			9597	9517	6754	6762	11073;11074	11074					0.03748606991609904
FSRPTQPK	8	Unmodified	_FSRPTQPK_					0	0	0		ENST00000414083.6_2_6:33289124-33290733:-|nuORF;ENST00000266000.10_2_6:33289121-33289671:-|nuORF	ENST00000414083.6_2_6:33289124-33290733:-|nuORF	ENST00000414083.6_2_6:33289124-33290733:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.7666931152344	2	480.766709	959.518865	0.69981	0.00033645	-0.35838	-0.0001723	0.34143	0.00016415	480.766416926079	35.236	0.8751	35.617	35.288	36.163	0.3812					50	22	3	0	0	0	0.13608	2	2693	2693;2705		113.41	17.221	1	2079200			9598	9517	6754	6762	11075;11076	11075					0.03748606991609904
FSRQHRGP	8	Unmodified	_FSRQHRGP_					0	0	0			REV__ENST00000368674.5_1_10:128191356-128211334:-|nuORF	REV__ENST00000368674.5_1_10:128191356-128211334:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.7589111328125	2	492.759749	983.504946	-0.02445	-1.2048E-05	-1.2662	-0.00062393	-1.2907	-0.00063598	492.7589743022962	19.143	0.5276	18.513	18.319	18.847	-0.6296					19	11	2	0	0	0	0.884	1	491	491		33.516	1.5607	1	143640	+		9599	20391	6755	6763	11077	11077					0.012533742831806194
FSRSVHLT	8	Unmodified	_FSRSVHLT_					0	0	0		ENSG00000197343|ENST00000252713|ZNF655;nc|ENSG00000197343|Q8N720-3|ZNF655	ENSG00000197343|ENST00000252713|ZNF655	ENSG00000197343|ENST00000252713|ZNF655	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.2391662597656	2	473.758884	945.503215	-0.29202	-0.00013835	0.94987	0.00045001	0.65785	0.00031166	473.75965181424857	23.116	0.65585	23.064	22.831	23.487	-0.052114					37	21	2	0	0	0	0.4196	1	786	786		29.15	4.9468	1	26412			9600	8155	6756	6764	11078	11078					0.028283204745548574
FSRVGVPGQ	9	Unmodified	_FSRVGVPGQ_					0	0	0			REV__ENST00000497397.1_1_14:106114767-106115169:-|nuORF	REV__ENST00000497397.1_1_14:106114767-106115169:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.7586669921875	2	473.758884	945.503215	-0.29202	-0.00013835	0.94987	0.00045001	0.65785	0.00031166	473.75965181424857	23.116	0.65585	23.064	22.831	23.487	-0.052114					37	21	2	0	0	0	0.7932	1	813	813		25.574	2.5316	1	26412	+		9601	27769	6757	6765	11079	11079					0.028283204745775947
FSSAIKWNF	9	Unmodified	_FSSAIKWNF_					0	0	0		ENST00000592940.2_1_19:1106169-1106568:+|nuORF	ENST00000592940.2_1_19:1106169-1106568:+|nuORF	ENST00000592940.2_1_19:1106169-1106568:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.2789916992188	2	550.282192	1098.54983	-1.0732	-0.00059057	-2.5389	-0.0013971	-3.6122	-0.0019877	550.2805312740918	60.534	0.56399	60.534	60.264	60.828	0					42	21	3	0	0	0	0.78058	1	5307	5307		30.504	1.3541	1	65788			9602	14299	6758	6766	11080	11080					0.004497603058325694
FSSIGLGLL	9	Unmodified	_FSSIGLGLL_					0	0	0			REV__ENST00000566609.1_1_16:1002623-1020980:-|nuORF	REV__ENST00000566609.1_1_16:1002623-1020980:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.76898193359375	2	453.768386	905.522219	0.022881	1.0383E-05	-0.31953	-0.00014499	-0.29665	-0.00013461	453.7681013564252	49.309	0.90843	49.306	49.004	49.912	-0.0030327					36	20	2	0	0	0	0.58151	1	4145	4145		47.916	3.3845	1	137280	+		9603	17398	6759	6767	11081	11081					0.06567857045627079
FSSIGLGLL	9	Unmodified	_FSSIGLGLL_					0	0	0			REV__ENST00000566609.1_1_16:1002623-1020980:-|nuORF	REV__ENST00000566609.1_1_16:1002623-1020980:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	453.768386	905.522219	-0.75162	-0.00034106	0.35166	0.00015957	-0.39996	-0.00018149	453.76840353344477	49.292	1.0608	49.268	48.883	49.943	-0.024029	-0.042007	0.00050941	NaN	47.916	38	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146330	+		9604	17398	6759	6767							0.06567857045627079
FSSIGLGLL	9	Unmodified	_FSSIGLGLL_					0	0	0			REV__ENST00000566609.1_1_16:1002623-1020980:-|nuORF	REV__ENST00000566609.1_1_16:1002623-1020980:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	453.768386	905.522219	0.25004	0.00011346	-0.61915	-0.00028095	-0.36911	-0.00016749	453.7679700312921	49.356	0.92676	49.356	48.925	49.852	0.00016785	0.046228	-0.00037163	NaN	47.916	35	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	174510	+		9605	17398	6759	6767							0.06567857045627079
FSSLTPLLL	9	Unmodified	_FSSLTPLLL_					0	0	0			REV__ENST00000556508.5_1_14:105362884-105363034:+|nuORF	REV__ENST00000556508.5_1_14:105362884-105363034:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.7961120605469	2	495.797143	989.579734	1.3672	0.00067785	-1.0952	-0.000543	0.27199	0.00013485	495.79626399989235	105.14	1.0402	105.29	104.99	106.03	0.15583					65	26	4	0	0	0	0.47272	1	12800	12800		53.351	3.3269	1	604160	+		9606	28700	6760	6768	11082	11082					0.08452699251199647
FSSTGQGNTE	10	Unmodified	_FSSTGQGNTE_					0	0	0		ENSG00000167562|ENST00000391785|ZNF701;nc|ENSG00000167562|Q9NV72|ZNF701	ENSG00000167562|ENST00000391785|ZNF701	ENSG00000167562|ENST00000391785|ZNF701	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.2193603515625	2	514.219985	1026.42542	0.43271	0.00022251	-0.13613	-7.0002E-05	0.29657	0.0001525	514.2198280176613	30.29	0.48075	30.201	29.917	30.398	-0.089544					25	10	3	0	0	0	0.34329	1	1989	1989		68.846	7.8742	1	387180			9607	6302	6761	6769	11083	11083					-0.08673781972129291
FSSVCYWTL	9	Unmodified	_FSSVCYWTL_					0	0	0		ENSG00000138075|ENST00000405322|ABCG5;nc|ENSG00000138075|Q9H222-2|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.2671508789062	2	553.254785	1104.49502	-0.73114	-0.00040451	-1.0053	-0.0005562	-1.7365	-0.00096071	553.2543002336103	27.258	0.43978	27.083	26.971	27.41	-0.17559					16	9	2	0	0	0	0.20789	1	1597	1597		45.952	10.334	1	74134			9608	4264	6762	6770	11084	11084					-0.053049945570819546
FSSVCYWTL	9	Unmodified	_FSSVCYWTL_					0	0	0		ENSG00000138075|ENST00000405322|ABCG5;nc|ENSG00000138075|Q9H222-2|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	553.254785	1104.49502	0.73918	0.00040896	4.6767	0.0025874	5.4159	0.0029964	553.7565927064412	26.732	0.10066	26.76	26.695	26.796	0.02817	-0.22397	0.0064538	NaN	45.952	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57499			9609	4264	6762	6770							-0.053049945570819546
FSTLLTSA	8	Unmodified	_FSTLLTSA_					0	0	0		nc|ENSG00000156345|Q8IZL9-2|CDK20	nc|ENSG00000156345|Q8IZL9-2|CDK20	nc|ENSG00000156345|Q8IZL9-2|CDK20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.22723388671875	2	420.229094	838.443634	-1.5729	-0.000661	-1.3827	-0.00058106	-2.9557	-0.0012421	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.90465	1	7583	7583		40.573	3.4135	1	634680			9610	15013	6763	6771	11085	11085					0.017950047405292935
FSTLPDTPH	9	Unmodified	_FSTLPDTPH_					0	0	0			REV__nc|ENSG00000130775|Q5TEJ8-6|THEMIS2	REV__nc|ENSG00000130775|Q5TEJ8-6|THEMIS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7469177246094	2	507.748182	1013.48181	0.40656	0.00020643	-0.36633	-0.00018601	0.040225	2.0424E-05	507.74793400391223	54.816	1.258	55.223	54.488	55.746	0.40663					71	29	3	0	0	0	0.28875	1	5561	5561		65.803	1.5959	1	2389700	+		9611	18907	6764	6772	11086	11086					-0.024391093448230095
FSTSATKFAGT	11	Unmodified	_FSTSATKFAGT_					0	0	0			REV__ENSG00000138050|ENST00000505747|THUMPD2	REV__ENSG00000138050|ENST00000505747|THUMPD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.3179321289062	2	559.279846	1116.54514	-0.058973	-3.2983E-05	1.9248	0.0010765	1.8658	0.0010435	559.2808352158133	76.247	0.32286	76.815	76.683	77.006	0.56835					10	7	2	0	0	0	0.15142	1	8682	8682		51.528	1.5032	1	151170	+		9612	19432	6765	6773	11087	11087					-0.00847168627569772
FSTTLVTLI	9	Unmodified	_FSTTLVTLI_					0	0	0			REV__ENSG00000214943|ENST00000399285|GPR33	REV__ENSG00000214943|ENST00000399285|GPR33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.7949523925781	2	497.794601	993.574648	-0.66885	-0.00033295	3.31	0.0016477	2.6411	0.0013147	497.7958642477004	48.816	1.5297	48.791	47.88	49.41	-0.025112					123	35	4	0	0	0	0.74721	1	4124	4124		37.159	0.13063	1	502690	+		9613	23669	6766	6774	11088	11088					0.07760395388584129
FSTYYLCR	8	Unmodified	_FSTYYLCR_					0	0	0			REV__nc|ENSG00000054392|Q5VTY9-2|HHAT	REV__nc|ENSG00000054392|Q5VTY9-2|HHAT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.9498291015625	2	526.747127	1051.4797	0.12564	6.6182E-05	2.6576	0.0013999	2.7832	0.0014661	526.7480235310662	27.376	0.35355	27.2	26.971	27.324	-0.17559					14	7	2	0	0	0	0.4196	1	1544	1544		23.042	1.0826	1	68576	+		9614	29692	6767	6775	11089	11089					-0.04397861354277666
FSVDANNIH	9	Unmodified	_FSVDANNIH_					0	0	0			REV__ENSG00000151952|ENST00000422113|TMEM132D	REV__ENSG00000151952|ENST00000422113|TMEM132D	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2400207519531	2	508.743431	1015.47231	-0.54949	-0.00027955	-0.552	-0.00028082	-1.1015	-0.00056038	508.7436691995268	35.977	0.36677	35.921	35.651	36.017	-0.055904					10	7	2	0	0	0	0.20789	1	2364	2364		30.504	0	1	19422	+		9615	20280	6768	6776	11090	11090					-0.0348087763032936
FSVEQIPLNED	11	Unmodified	_FSVEQIPLNED_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	645.8114013671875	2	645.81425	1289.61395	1.4665	0.00094707	-4.4666	-0.0028846	-3.0001	-0.0019375	645.8112841077366	26.214	0.38592	26.28	26.095	26.481	0.066877					45	18	3	0	0	0	0.48313	1	993	993		53.089	1.5612	1	164260	+		9616	17426	6769	6777	11091	11091					-0.0192754911852262
FSVHKEKRT	9	Unmodified	_FSVHKEKRT_					0	0	0		ENST00000525586.5_1_11:119185190-119185971:-|nuORF;ENST00000528533.5_1_11:119181936-119187838:-|nuORF;ENSG00000076706|ENST00000264036|MCAM	ENST00000525586.5_1_11:119185190-119185971:-|nuORF	ENST00000525586.5_1_11:119185190-119185971:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.8023681640625	2	566.317097	1130.61964	1.0849	0.00061441	-2.1683	-0.0012279	-1.0833	-0.00061352	566.8173619711908	55.8	0.30391	56.36	56.148	56.452	0.55953					11	7	2	0	0	0	0.20789	1	5740	5740		29.15	0	1	370090			9617	1365	6770	6778	11092	11092					0.05955638974455724
FSVIIPLNQPS	11	Unmodified	_FSVIIPLNQPS_					0	0	0		chr6:70699512-70732378|16|17.38|0.56|4.96|+|0|TE_info:L1MA3,L1MA3_dup3493,L1,LINE,donor,-,70697606,70699512|None,SMAP1|18	chr6:70699512-70732378|16|17.38|0.56|4.96|+|0|TE_info:L1MA3,L1MA3_dup3493,L1,LINE,donor,-,70697606,70699512|None,SMAP1|18	chr6:70699512-70732378|16|17.38|0.56|4.96|+|0|TE_info:L1MA3,L1MA3_dup3493,L1,LINE,donor,-,70697606,70699512|None,SMAP1|18	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.56280517578125	3	405.564168	1213.67067	-1.5366	-0.00062318	3.2052	0.0012999	1.6686	0.00067672	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.66929	1	5621	5621		32.034	12.771	1	187890			9618	481	6771	6779	11093	11093					0.0723854322866373
FSVIKIIKKSR	11	Unmodified	_FSVIKIIKKSR_					0	0	0			REV__ENST00000377461.8_1_19:48734941-48735010:-|nuORF	REV__ENST00000377461.8_1_19:48734941-48735010:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.6265563964844	3	440.29049	1317.84964	0.36311	0.00015988	3.9032	0.0017185	4.2663	0.0018784	440.2919928155031	58.022	1.2392	58.056	57.534	58.773	0.033905					105	37	4	0	0	0	0.77803	1	5278	5278		15.921	4.8239	1	302530	+		9619	25868	6772	6780	11094	11094					0.20343052587395505
FSVLYILF	8	Unmodified	_FSVLYILF_					0	0	0			REV__nc|ENSG00000185518|Q7L1I2-2|SV2B	REV__nc|ENSG00000185518|Q7L1I2-2|SV2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.29095458984375	2	501.288954	1000.56336	-0.4806	-0.00024092	3.9838	0.001997	3.5032	0.0017561	501.29075662244736	99.197	1.8998	99.42	98.833	100.73	0.22262					82	44	3	0	0	0	0.92176	1	10339	10339		46.766	13.954	1	768070	+		9620	22772	6773	6781	11095	11095					0.06309618085083457
FSVVVFFI	8	Unmodified	_FSVVVFFI_					0	0	0			REV__ENSG00000136546|ENST00000643258|SCN7A	REV__ENSG00000136546|ENST00000643258|SCN7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2779235839844	2	479.275847	956.537141	2.2671	0.0010866	1.6123	0.00077275	3.8795	0.0018593	479.2765493533754	97.406	1.666	97.351	96.889	98.555	-0.055542					99	38	4	0	0	0	0.88915	1	10493	10493		35.201	8.4046	1	975730	+		9621	19320	6774	6782	11096	11096					0.05713348913616301
FSVVVFFI	8	Unmodified	_FSVVVFFI_					0	0	0			REV__ENSG00000136546|ENST00000643258|SCN7A	REV__ENSG00000136546|ENST00000643258|SCN7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2781677246094	2	479.275847	956.537141	-0.45441	-0.00021779	4.2778	0.0020503	3.8234	0.0018325	479.2777888563568	97.247	1.3159	97.295	96.739	98.055	0.048157					88	30	4	0	0	0	0.884	1	10388	10388		33.516	4.366	1	962360	+		9622	19320	6774	6782	11097	11097					0.05713348913616301
FSVVVFFI	8	Unmodified	_FSVVVFFI_					0	0	0			REV__ENSG00000136546|ENST00000643258|SCN7A	REV__ENSG00000136546|ENST00000643258|SCN7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2785339355469	2	479.275847	956.537141	0.75121	0.00036004	3.2564	0.0015607	4.0076	0.0019207	479.2773206113693	97.297	1.0964	97.46	96.922	98.018	0.16317					63	25	3	0	0	0	0.86288	1	10091	10091		26.796	0	1	731730	+		9623	19320	6774	6782	11098	11098					0.05713348913616301
FSVVVFFI	8	Unmodified	_FSVVVFFI_					0	0	0			REV__ENSG00000136546|ENST00000643258|SCN7A	REV__ENSG00000136546|ENST00000643258|SCN7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27838134765625	2	479.275847	956.537141	2.056	0.00098538	1.7576	0.00084237	3.8135	0.0018277	479.27658358696607	97.01	0.8148	97.415	96.969	97.784	0.40498					49	19	3	0	0	0	0.86288	2	11664	11642;11664		35.201	1.7077	1	862190	+		9624	19320	6774	6782	11099;11100	11100					0.05713348913616301
FSYALCLWEI	10	Unmodified	_FSYALCLWEI_					0	0	0		ENSG00000116783|ENST00000326637|TNNI3K;nc|ENSG00000116783|Q59H18-4|TNNI3K;nc|ENSG00000116783|Q59H18-1|TNNI3K	ENSG00000116783|ENST00000326637|TNNI3K	ENSG00000116783|ENST00000326637|TNNI3K	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.8046875	2	622.804642	1243.59473	-0.30907	-0.00019249	-0.57622	-0.00035887	-0.88529	-0.00055136	622.8041981667604	56.814	0.55558	57.211	56.942	57.498	0.39672					27	12	3	0	0	0	0.77314	1	5896	5896		40.778	2.0246	1	635480			9625	2947	6775	6783	11101	11101					-0.017321769431418943
FSYSNSYY	8	Unmodified	_FSYSNSYY_					0	0	0			REV__ENSG00000169031|ENST00000396578|COL4A3	REV__ENSG00000169031|ENST00000396578|COL4A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.7088623046875	2	515.711265	1029.40798	0.3793	0.00019561	-4.3515	-0.0022441	-3.9723	-0.0020485	515.708926489124	30.012	0.98	29.997	29.601	30.581	-0.015167					58	23	4	0	0	0	0.90465	1	1560	1560		40.573	1.3198	1	333030	+		9626	21543	6776	6784	11102	11102					-0.10555077507137867
FSYTIESNI	9	Unmodified	_FSYTIESNI_					0	0	0			REV__nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	REV__nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.2529296875	2	537.261122	1072.50769	-2.0816	-0.0011184	-0.96444	-0.00051816	-3.046	-0.0016365	537.2605194937096	43.508	0.43863	44.282	44.064	44.502	0.7738					18	10	2	0	0	0	0.54908	1	3957	3957		49.536	1.8787	1	845480	+		9627	23887	6777	6785	11103	11103					-0.025662598931603497
FSYTIESNI	9	Unmodified	_FSYTIESNI_					0	0	0			REV__nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	REV__nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	537.261122	1072.50769	-0.85672	-0.00046028	-1.9684	-0.0010576	-2.8251	-0.0015178	537.2601115067946	43.718	0.47888	44.169	43.963	44.442	0.45025	-0.056829	-0.00067287	NaN	49.536	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	727260	+		9628	23887	6777	6785							-0.025662598931603497
FSYTIESNI	9	Unmodified	_FSYTIESNI_					0	0	0			REV__nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	REV__nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	537.261122	1072.50769	-2.0816	-0.0011184	-0.96444	-0.00051816	-3.046	-0.0016365	537.2605194937096	43.508	0.43863	44.282	44.064	44.502	0.7738	0.056829	0.00040593	NaN	49.536	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	845480	+		9629	23887	6777	6785							-0.025662598931603497
FSYVSPEL	8	Unmodified	_FSYVSPEL_					0	0	0		ENSG00000027075|ENST00000332981|PRKCH;ENST00000556245.1_1_14:62011269-62016546:+|nuORF;nc|ENSG00000027075|P24723-2|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2338562011719	2	471.234376	940.454199	-0.88882	-0.00041884	1.0957	0.00051635	0.20691	9.7502E-05	471.2346931184247	73.215	1.0351	73.603	73.043	74.078	0.38779					53	27	3	0	0	0	0.67263	1	8213	8213		68.485	5.5063	1	1012600			9630	873	6778	6786	11104	11104					-0.018410126050525832
FSYVSPEL	8	Unmodified	_FSYVSPEL_					0	0	0		ENSG00000027075|ENST00000332981|PRKCH;ENST00000556245.1_1_14:62011269-62016546:+|nuORF;nc|ENSG00000027075|P24723-2|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2342224121094	2	471.234376	940.454199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.085	1	73.638	73.138	74.138	0.55386								0	0	0	0.12641	1	8223	8223		79.939	14.042	1				9631	873	6778	6786	11105	11105					-0.018410126050525832
FTAAPDLKLKL	11	Unmodified	_FTAAPDLKLKL_					0	0	0		nc|ENSG00000188010|Q502X0|MORN2;ENSG00000188010|ENST00000644631|MORN2	nc|ENSG00000188010|Q502X0|MORN2	nc|ENSG00000188010|Q502X0|MORN2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2485656738281	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.6	1	114.63	114.13	115.13	0.026466								0	0	0	0.56276	1	12551	12551		18.531	0	1				9632	7898	6779	6787	11106	11106					0.12347706642390222
FTARLRGQR	9	Unmodified	_FTARLRGQR_					0	0	0			REV__ENSG00000278685|ENST00000615129|IQCA1L	REV__ENSG00000278685|ENST00000615129|IQCA1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.3065185546875	2	552.822881	1103.63121	-0.65257	-0.00036075	1.9286	0.0010662	1.276	0.00070541	552.823855216537	92.613	1.4295	93.063	92.392	93.821	0.44988					47	33	2	0	0	0	0.20789	1	10993	10993		29.15	0	1	205730	+		9633	24038	6780	6788	11107	11107					0.08353880788445167
FTATGDCL	8	Unmodified	_FTATGDCL_					0	0	0			REV__nc|ENSG00000086827|O43264-2|ZW10	REV__nc|ENSG00000086827|O43264-2|ZW10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1938171386719	2	414.183829	826.353105	0.057291	2.3729E-05	-2.9845	-0.0012361	-2.9272	-0.0012124	414.183038729514	81.859	1.246	82.359	81.993	83.239	0.49966					82	30	4	0	0	0	0.4196	1	9556	9556		35.201	15.841	1	2817400	+		9634	16915	6781	6789	11108	11108					-0.06701787579402207
FTAVGINQRKL	11	Unmodified	_FTAVGINQRKL_					0	0	0			REV__ENST00000462668.5_1_3:160131924-160151594:+|nuORF	REV__ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.8710327148438	2	623.866954	1245.71936	1.336	0.00083349	4.1968	0.0026182	5.5328	0.0034517	623.8694839910095	104.33	2.0015	104.5	104.05	106.06	0.17096					147	50	4	0	0	0	0.74763	1	11122	11122		22.58	1.7425	1	2830400	+		9635	18016	6782	6790	11109	11109					0.10632456588427885
FTCNSKLVIHK	11	Unmodified	_FTCNSKLVIHK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	645.884765625	2	645.355365	1288.69618	0.024149	1.5585E-05	1.7561	0.0011333	1.7802	0.0011489	645.3566795678589	105.97	1.0666	105.97	105.51	106.57	0					39	24	2	0	0	0	0.1728	1	10979	10979		24.519	8.8774	1	144810			9636	3753	6783	6791	11110	11110					0.06337694479407219
FTDAGLKEL	9	Unmodified	_FTDAGLKEL_					0	0	0		ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.2675476074219	2	497.266207	992.517862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.009	1	53.423	52.923	53.923	0.4139								0	0	0	0.29288	1	5335	5335		63.534	8.7575	1				9637	4099	6784	6792	11111	11111					0.02130347832053303
FTDAGLKEL	9	Unmodified	_FTDAGLKEL_					0	0	0		ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.2660827636719	2	497.266207	992.517862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.085	1	53.499	52.999	53.999	0.4139								0	0	0	0.16738	1	5346	5346		70.816	8.7088	1				9638	4099	6784	6792	11112	11112					0.02130347832053303
FTDAGLKEL	9	Unmodified	_FTDAGLKEL_					0	0	0		ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.26751708984375	2	497.266207	992.517862	-0.35605	-0.00017705	-0.058772	-2.9225E-05	-0.41482	-0.00020628	497.26620537078963	52.845	0.53834	53.459	53.158	53.696	0.61436					15	12	2	0	0	0	0.23176	2	5323	5323;5338		70.816	10.693	1	570380			9639	4099	6784	6792	11113;11114	11113					0.02130347832053303
FTDELHQLQ	9	Unmodified	_FTDELHQLQ_					0	0	0		ENSG00000174576|ENST00000311034|NPAS4	ENSG00000174576|ENST00000311034|NPAS4	ENSG00000174576|ENST00000311034|NPAS4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.2813110351562	2	565.77747	1129.54039	2.0736	0.0011732	3.6116	0.0020434	5.6852	0.0032165	566.2794500717123	27.477	1.6254	27.222	26.272	27.897	-0.25465					58	36	3	0	0	0	0.55097	1	1582	1582		49.442	1.7842	1	375430			9640	6948	6785	6793	11115	11115					-0.019200527703105763
FTDELHQLQ	9	Unmodified	_FTDELHQLQ_					0	0	0		ENSG00000174576|ENST00000311034|NPAS4	ENSG00000174576|ENST00000311034|NPAS4	ENSG00000174576|ENST00000311034|NPAS4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	565.77747	1129.54039	-0.20819	-0.00011779	6.2061	0.0035113	5.9979	0.0033935	566.2808896498921	27.478	1.3279	27.303	26.523	27.851	-0.17559	0.040435	0.0015132	NaN	49.442	53	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	445570			9641	6948	6785	6793							-0.019200527703105763
FTDREIDLY	9	Unmodified	_FTDREIDLY_					0	0	0		ENSG00000142347|ENST00000644032|MYO1F;ENST00000599123.1_1_19:8619471-8620644:-|nuORF;ENST00000594774.5_1_19:8618146-8642307:-|nuORF;ENST00000595325.5_1_19:8616850-8642307:-|nuORF;ENST00000594977.5_1_19:8612968-8642307:-|nuORF	ENSG00000142347|ENST00000644032|MYO1F	ENSG00000142347|ENST00000644032|MYO1F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	586.787353515625	2	586.285128	1170.5557	-0.75112	-0.00044037	0.6296	0.00036912	-0.12152	-7.1245E-05	586.2852741226917	60.779	0.59797	60.766	60.523	61.121	-0.012203					34	20	3	0	0	0	0.44421	1	5646	5646		54.776	3.4409	1	169240			9642	4560	6786	6794	11116	11116					-0.022751859731215518
FTDREIDLY	9	Unmodified	_FTDREIDLY_					0	0	0		ENSG00000142347|ENST00000644032|MYO1F;ENST00000599123.1_1_19:8619471-8620644:-|nuORF;ENST00000594774.5_1_19:8618146-8642307:-|nuORF;ENST00000595325.5_1_19:8616850-8642307:-|nuORF;ENST00000594977.5_1_19:8612968-8642307:-|nuORF	ENSG00000142347|ENST00000644032|MYO1F	ENSG00000142347|ENST00000644032|MYO1F	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	586.285128	1170.5557	0.63915	0.00037473	-0.34133	-0.00020012	0.29782	0.00017461	586.2846534060931	60.636	0.5565	60.604	60.319	60.876	-0.032509	-0.058748	-0.0012377	NaN	54.776	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191090			9643	4560	6786	6794							-0.022751859731215518
FTDREIDLY	9	Unmodified	_FTDREIDLY_					0	0	0		ENSG00000142347|ENST00000644032|MYO1F;ENST00000599123.1_1_19:8619471-8620644:-|nuORF;ENST00000594774.5_1_19:8618146-8642307:-|nuORF;ENST00000595325.5_1_19:8616850-8642307:-|nuORF;ENST00000594977.5_1_19:8612968-8642307:-|nuORF	ENSG00000142347|ENST00000644032|MYO1F	ENSG00000142347|ENST00000644032|MYO1F	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	586.285128	1170.5557	-2.0949	-0.0012282	1.5703	0.00092063	-0.52458	-0.00030755	586.285877020679	60.586	0.6418	60.617	60.311	60.953	0.0312	-0.045387	0.0010038	NaN	54.776	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197160			9644	4560	6786	6794							-0.022751859731215518
FTDVNSILRY	10	Unmodified	_FTDVNSILRY_					0	0	0		ENSG00000136628|ENST00000366923|EPRS1	ENSG00000136628|ENST00000366923|EPRS1	ENSG00000136628|ENST00000366923|EPRS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	614.3344116210938	2	614.322045	1226.62954	-0.37286	-0.00022906	0.62402	0.00038335	0.25116	0.00015429	614.3225194090037	70.598	0.59708	70.628	70.405	71.003	0.030495					74	29	3	0	0	0	0.013955	4	6679	6674;6679;6683;6692		128.6	79.161	1	907280			9645	4122	6787	6795	11117;11118;11119;11120	11118					0.025287821891879503
FTDVNSILRY	10	Unmodified	_FTDVNSILRY_					0	0	0		ENSG00000136628|ENST00000366923|EPRS1	ENSG00000136628|ENST00000366923|EPRS1	ENSG00000136628|ENST00000366923|EPRS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	614.8246459960938	2	614.322045	1226.62954	-0.55403	-0.00034036	0.88478	0.00054354	0.33075	0.00020318	614.3226350552665	70.489	0.64404	70.451	70.22	70.864	-0.037865					82	33	3	0	0	0	0.19646	1	6857	6857		86.882	33.793	1	1122600			9646	4122	6787	6795	11121	11121					0.025287821891879503
FTDVNSILRY	10	Unmodified	_FTDVNSILRY_					0	0	0		ENSG00000136628|ENST00000366923|EPRS1	ENSG00000136628|ENST00000366923|EPRS1	ENSG00000136628|ENST00000366923|EPRS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	614.322045	1226.62954	-0.8538	-0.00052451	1.0492	0.00064457	0.19544	0.00012006	614.3228104150538	70.414	0.62979	70.452	70.181	70.811	0.038055	-0.058474	0.00026323	NaN	128.6	76	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	928230			9647	4122	6787	6795							0.025287821891879503
FTEAGLKEL	9	Unmodified	_FTEAGLKEL_					0	0	0		nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.2738037109375	2	504.274032	1006.53351	0.62891	0.00031714	-0.64791	-0.00032672	-0.018997	-9.5796E-06	504.27375428549135	52.346	0.78512	53.013	52.799	53.584	0.6673					33	18	3	0	0	0	0.0062975	2	5260	5260;5271		136.27	14.092	1	1308500			9648	1479	6788	6796	11122;11123	11122					0.0305063434910835
FTEHDLEDDQ	10	Unmodified	_FTEHDLEDDQ_					0	0	0			REV__ENSG00000186765|ENST00000417245|FSCN2	REV__ENSG00000186765|ENST00000417245|FSCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.8377685546875	3	416.838685	1247.49423	-0.39394	-0.00016421	-1.75	-0.00072946	-2.1439	-0.00089367	416.83788538428985	30.06	1.0565	30.089	29.748	30.805	0.028618					55	23	3	0	0	0	0.85979	1	1930	1930		35.178	1.0917	1	1292800	+		9649	22877	6789	6797	11124	11124					-0.1196216246307813
FTEIIKTAKI	10	Unmodified	_FTEIIKTAKI_					0	0	0		ENSG00000148297|ENST00000343730|MED22;nc|ENSG00000148297|Q15528-2|MED22	ENSG00000148297|ENST00000343730|MED22	ENSG00000148297|ENST00000343730|MED22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3523559570312	2	582.355357	1162.69616	0.75692	0.00044079	-3.4476	-0.0020077	-2.6906	-0.0015669	582.3532376593708	103.08	2.584	103.3	103	105.58	0.22556					189	68	3	0	0	0	0.82886	1	12740	12740		37.812	4.9991	1	7736200			9650	4944	6790	6798	11125	11125					0.12132017751082458
FTEIIVAIF	9	Unmodified	_FTEIIVAIF_					0	0	0			REV__ENST00000497170.5_1_13:101795259-101997694:-|nuORF	REV__ENST00000497170.5_1_13:101795259-101997694:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.30517578125	2	526.804968	1051.59538	-0.036904	-1.9441E-05	-0.53408	-0.00028136	-0.57099	-0.0003008	527.3054504644606	99.375	1.7033	99.425	98.884	100.59	0.04982					129	39	5	0	0	0	0.7932	1	10564	10564		26.796	0	1	1726400	+		9651	17341	6791	6799	11126	11126					0.07164985768213228
FTEKDALL	8	Unmodified	_FTEKDALL_					0	0	0		ENSG00000135968|ENST00000309863|GCC2	ENSG00000135968|ENST00000309863|GCC2	ENSG00000135968|ENST00000309863|GCC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.2396545410156	2	468.755475	935.496398	0.038551	1.8071E-05	0.20692	9.6996E-05	0.24547	0.00011507	468.7553791399411	57.514	0.70481	58.07	57.725	58.43	0.55512					36	17	3	0	0	0	0.4196	1	5948	5948		21.96	8.1846	1	1000100			9652	4076	6792	6800	11127	11127					0.026069628033155823
FTEKMKKVVSL	11	Unmodified	_FTEKMKKVVSL_					0	0	0			REV__nc|ENSG00000115425|Q9BY49-2|PECR	REV__nc|ENSG00000115425|Q9BY49-2|PECR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.25518798828125	3	437.256458	1308.74754	0.70661	0.00030897	1.3781	0.00060256	2.0847	0.00091153	437.25702551453304	97.287	2.1363	97.451	96.19	98.327	0.16316					129	49	3	0	0	0	0.74405	1	10103	10103		23.378	4.1152	1	293250	+		9653	18121	6793	6801	11128	11128					0.10552018453495293
FTELRILLT	9	Unmodified	_FTELRILLT_					0	0	0		ENST00000571584.1_2_17:53040728-53042179:-|nuORF	ENST00000571584.1_2_17:53040728-53042179:-|nuORF	ENST00000571584.1_2_17:53040728-53042179:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3319702148438	2	553.334424	1104.6543	-1.4413	-0.00079751	-2.1828	-0.0012078	-3.6241	-0.0020053	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.7932	1	9984	9984		26.693	1.1189	1	2490200			9654	14000	6794	6802	11129	11129					0.10615462062582992
FTEQYNEQY	9	Unmodified	_FTEQYNEQY_					0	0	0		ENSG00000173914|ENST00000310046|RBM4B	ENSG00000173914|ENST00000310046|RBM4B	ENSG00000173914|ENST00000310046|RBM4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.2543334960938	2	611.256568	1220.49858	-0.3442	-0.00021039	0.62396	0.0003814	0.27976	0.000171	611.2570878819059	52.124	0.5939	52.1	51.821	52.415	-0.023849					28	13	3	0	0	0	0.24527	2	4602	4590;4602		69.628	28.849	1	148760			9655	6898	6795	6803	11130;11131	11131					-0.10284653249505027
FTEQYNEQY	9	Unmodified	_FTEQYNEQY_					0	0	0		ENSG00000173914|ENST00000310046|RBM4B	ENSG00000173914|ENST00000310046|RBM4B	ENSG00000173914|ENST00000310046|RBM4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.256103515625	2	611.256568	1220.49858	-0.75949	-0.00046425	0.78543	0.0004801	0.025939	1.5855E-05	611.2569267171248	52.185	0.51841	52.197	51.965	52.483	0.012436					18	11	2	0	0	0	0.15708	1	4541	4541		82.75	40.354	1	164400			9656	6898	6795	6803	11132	11132					-0.10284653249505027
FTEQYNEQY	9	Unmodified	_FTEQYNEQY_					0	0	0		ENSG00000173914|ENST00000310046|RBM4B	ENSG00000173914|ENST00000310046|RBM4B	ENSG00000173914|ENST00000310046|RBM4B	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	611.256568	1220.49858	-0.321	-0.00019621	0.69245	0.00042327	0.37145	0.00022705	611.2567894162274	52.201	0.42614	52.199	51.955	52.382	-0.0020447	-0.0010627	1.6982E-05	NaN	82.75	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118020			9657	6898	6795	6803							-0.10284653249505027
FTEQYNEQY	9	Unmodified	_FTEQYNEQY_					0	0	0		ENSG00000173914|ENST00000310046|RBM4B	ENSG00000173914|ENST00000310046|RBM4B	ENSG00000173914|ENST00000310046|RBM4B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	611.256568	1220.49858	1.0573	0.00064629	-0.41987	-0.00025665	0.63744	0.00038964	611.2569410748998	52.263	0.20143	52.304	52.186	52.387	0.040596	0.10369	-0.0013428	NaN	82.75	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48884			9658	6898	6795	6803							-0.10284653249505027
FTETIEWI	8	Unmodified	_FTETIEWI_					0	0	0			REV__ENSG00000278057|ENST00000617225|TEX28	REV__ENSG00000278057|ENST00000617225|TEX28	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.77685546875	2	519.760758	1037.50696	0.53504	0.00027809	-1.1128	-0.0005784	-0.57779	-0.00030031	519.7601739745471	37.776	0.10918	38.089	38.018	38.127	0.31312					4	2	2	0	0	0	0.4196	1	3053	3053		12.959	9.5492	1	34514	+		9659	24031	6796	6804	11133	11133					-0.010290545422321884
FTFFRVPKRR	10	Unmodified	_FTFFRVPKRR_					0	0	0			REV__nc|ENSG00000075035|Q2TBF2-2|WSCD2	REV__nc|ENSG00000075035|Q2TBF2-2|WSCD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.93243408203125	3	451.934929	1352.78296	-1.2099	-0.00054677	-3.7527	-0.001696	-4.9626	-0.0022428	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.85086	1	10534	10534		19.263	1.4295	1	1176100	+		9660	16699	6797	6805	11134	11134					0.12067861816149161
FTFHIKLL	8	Unmodified	_FTFHIKLL_					0	0	0			REV__ENSG00000156886|ENST00000389202|ITGAD	REV__ENSG00000156886|ENST00000389202|ITGAD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.24102783203125	2	509.807845	1017.60114	-0.41336	-0.00021073	-3.7425	-0.0019079	-4.1558	-0.0021187	509.80573770622084	38.659	0.53283	39.001	38.658	39.191	0.34187					27	12	3	0	0	0	0.4196	1	3215	3215		42.396	10.441	1	273540	+		9661	20515	6798	6806	11135	11135					0.09304129070551426
FTFILAVLSWI	11	Unmodified	_FTFILAVLSWI_					0	0	0			REV__ENSG00000154165|ENST00000284311|GPR15	REV__ENSG00000154165|ENST00000284311|GPR15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2554931640625	3	437.256675	1308.7482	-1.0127	-0.0004428	2.5279	0.0011053	1.5152	0.00066254	437.25769841228777	99.435	2.9287	99.435	98.234	101.16	0					165	70	3	0	0	0	0.67762	1	9989	9989		35.178	9.1148	1	385900	+		9662	20371	6799	6807	11136	11136					0.10617181164843714
FTFLRKKHG	9	Unmodified	_FTFLRKKHG_					0	0	0			REV__nc|ENSG00000135655|Q9Y4E8-2|USP15	REV__nc|ENSG00000135655|Q9Y4E8-2|USP15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.330810546875	2	567.33255	1132.65055	-0.54401	-0.00030863	-3.815	-0.0021644	-4.359	-0.002473	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.7932	1	8917	8917		7.6903	1.3776	1	4477200	+		9663	19238	6800	6808	11137	11137					0.08952837079345954
FTFRWRRHHHR	11	Unmodified	_FTFRWRRHHHR_					0	0	0			REV__nc|ENSG00000177663|Q96F46-2|IL17RA	REV__nc|ENSG00000177663|Q96F46-2|IL17RA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3123779296875	3	545.959131	1634.85556	-1.0618	-0.00057971	-3.0552	-0.001668	-4.117	-0.0022477	546.2918488007923	27.421	0.61468	27.245	26.926	27.54	-0.17559					17	13	2	0	0	0	0.18276	1	1598	1598		2.688	1.3661	1	116060	+		9664	22222	6801	6809	11138	11138					0.06353008662290449
FTFVCMAL	8	Unmodified	_FTFVCMAL_					0	0	0		ENST00000515517.1_1_5:14741839-14746068:-|nuORF;ENST00000503939.5_1_5:14741448-14751330:-|nuORF;nc|ENSG00000154122|Q9HCJ1-2|ANKH;ENSG00000154122|ENST00000284268|ANKH	ENST00000515517.1_1_5:14741839-14746068:-|nuORF	ENST00000515517.1_1_5:14741839-14746068:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7074279785156	2	466.224442	930.434332	-0.39455	-0.00018395	3.1338	0.001461	2.7392	0.0012771	466.22572947027686	79.005	1.1051	79.416	79.1	80.205	0.41059					49	25	3	0	0	0	0.4196	1	9126	9126		14.664	0.88877	1	1043700			9665	5252	6802	6810	11139	11139					-0.03366803141022956
FTFVSVTSL	9	Unmodified	_FTFVSVTSL_					0	0	0			REV__ENSG00000178719|ENST00000395068|GRINA	REV__ENSG00000178719|ENST00000395068|GRINA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29388427734375	2	500.771126	999.527698	-0.86734	-0.00043434	2.0549	0.001029	1.1876	0.0005947	500.7717789000311	84.534	0.59921	84.97	84.666	85.265	0.43538					24	14	2	0	0	0	0.20789	1	9839	9839		29.15	6.1071	1	200880	+		9666	22290	6803	6811	11140	11140					0.027915358374457355
FTGDRKGR	8	Unmodified	_FTGDRKGR_					0	0	0			REV__nc|ENSG00000145675|P27986-5|PIK3R1	REV__nc|ENSG00000145675|P27986-5|PIK3R1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.7533874511719	2	468.754133	935.493713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.511	1	21.58	21.08	22.08	0.068251								0	0	0	0.30457	1	584	584		50.025	9.4519	1		+		9667	19956	6804	6812	11141	11141					0.023385521890418204
FTGKKLYR	8	Unmodified	_FTGKKLYR_					0	0	0			REV__chr10:70093845-70109033|56|16.41|0.8|4.36|+|ENST00000677881|MACROH2A2,MACROH2A2	REV__chr10:70093845-70109033|56|16.41|0.8|4.36|+|ENST00000677881|MACROH2A2,MACROH2A2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3100280761719	2	506.800552	1011.58655	-0.48721	-0.00024692	2.159	0.0010942	1.6718	0.00084726	506.8016202498792	51.87	0.76432	51.904	51.448	52.213	0.034588					41	24	2	0	0	0	0.4196	1	4095	4095		16.473	0	1	126860	+		9668	15479	6805	6813	11142	11142					0.08122056922411502
FTGLTFRME	9	Unmodified	_FTGLTFRME_					0	0	0			REV__nc|ENSG00000176170|Q9NYA1-2|SPHK1	REV__nc|ENSG00000176170|Q9NYA1-2|SPHK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.2769165039062	2	551.273509	1100.53247	-0.071144	-3.922E-05	3.5122	0.0019362	3.4411	0.001897	551.2753010246721	26.996	0.99519	27.037	26.738	27.733	0.040834					84	31	4	0	0	0	0.78058	1	1236	1236		30.504	2.6214	1	517830	+		9669	30050	6806	6814	11143	11143					-0.013779032914726486
FTGPLFVF	8	Unmodified	_FTGPLFVF_					0	0	0			REV__ENST00000534548.6_2_11:134079277-134079343:-|nuORF	REV__ENST00000534548.6_2_11:134079277-134079343:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2528991699219	2	464.252372	926.49019	0.59461	0.00027605	2.7524	0.0012778	3.347	0.0015538	464.25355465849185	81.523	3.0273	81.667	79.894	82.921	0.14352					163	84	3	0	0	0	0.85277	1	7660	7660		25.45	2.4077	1	434730	+		9670	28370	6807	6815	11144	11144					0.02400489362469216
FTGYVLTSN	9	Unmodified	_FTGYVLTSN_					0	0	0			REV__ENST00000548458.6_1_12:105761268-105764632:+|nuORF	REV__ENST00000548458.6_1_12:105761268-105764632:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2903747558594	2	501.250557	1000.48656	-0.41201	-0.00020652	0.81014	0.00040608	0.39813	0.00019956	501.2510909329371	86.346	0.12448	86.402	86.314	86.439	0.055649					4	2	2	0	0	0	0.20789	1	8789	8789		23.042	10.083	1	18615	+		9671	28571	6808	6816	11145	11145					-0.013662252020594678
FTHICEYT	8	Unmodified	_FTHICEYT_					0	0	0		ENSG00000117597|ENST00000491415|UTP25;ENST00000457820.1_2_1:210016778-210017042:+|nuORF	ENSG00000117597|ENST00000491415|UTP25	ENSG00000117597|ENST00000491415|UTP25	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.2330322265625	2	507.223485	1012.43242	-0.13173	-6.6817E-05	-3.5654	-0.0018085	-3.6971	-0.0018753	507.22155961782465	24.691	0.50095	24.654	24.297	24.798	-0.037178					13	10	2	0	0	0	0.4196	1	934	934		25.45	1.2474	1	26739			9672	2988	6809	6817	11146	11146					-0.07330140625265358
FTHKKQSGG	9	Unmodified	_FTHKKQSGG_					0	0	0		ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1	ENSG00000168827|ENST00000486715|GFM1	ENSG00000168827|ENST00000486715|GFM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2610778808594	2	495.261791	988.509028	-2.6631	-0.0013189	-2.7551	-0.0013645	-5.4182	-0.0026834	495.26028573461133	40.858	1.9733	41.25	40.867	42.841	0.39209					105	53	3	0	0	0	0.77696	1	3633	3633		31.53	1.0262	1	8396000			9673	6443	6810	6818	11147	11147					0.014314189862375315
FTHPQYLKS	9	Unmodified	_FTHPQYLKS_					0	0	0			REV__ENSG00000135315|ENST00000403245|CEP162	REV__ENSG00000135315|ENST00000403245|CEP162	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.7586059570312	2	560.792924	1119.57129	-0.40179	-0.00022532	2.2817	0.0012796	1.8799	0.0010543	560.793963394038	47.688	0.37486	48.158	47.933	48.308	0.46941					15	9	2	0	0	0	0.20789	1	4574	4574		19.997	0	1	151740	+		9674	19208	6811	6819	11148	11148					0.016291453345502305
FTHRRLHTPM	10	Unmodified	_FTHRRLHTPM_					0	0	0		ENSG00000232382|ENST00000642057|OR5K1	ENSG00000232382|ENST00000642057|OR5K1	ENSG00000232382|ENST00000642057|OR5K1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.59783935546875	3	432.564508	1294.67169	2.4136	0.001044	3.0931	0.0013379	5.5066	0.002382	432.5655492342317	107.37	0.1293	107.41	107.34	107.47	0.035622					4	2	2	0	0	0	0.37624	1	11796	11796		14.086	0	1	35626			9675	8740	6812	6820	11149	11149					0.03614479116572511
FTHVLPFVI	9	Unmodified	_FTHVLPFVI_					0	0	0		nc|ENSG00000157954|Q9Y4P8-3|WIPI2;nc|ENSG00000157954|Q9Y4P8-5|WIPI2;ENST00000475309.5_1_7:5254056-5256899:+|nuORF	nc|ENSG00000157954|Q9Y4P8-3|WIPI2	nc|ENSG00000157954|Q9Y4P8-3|WIPI2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.8140258789062	2	536.813128	1071.6117	-0.95733	-0.00051391	2.9891	0.0016046	2.0317	0.0010907	536.8145477540568	60.919	1.1415	61.308	60.605	61.746	0.38945					62	34	3	0	0	0	0.78058	1	6495	6495		30.504	5.9844	1	4106400			9676	15025	6813	6821	11150	11150					0.07876111724976909
FTIFVPIVL	9	Unmodified	_FTIFVPIVL_					0	0	0		ENSG00000104321|ENST00000262209|TRPA1	ENSG00000104321|ENST00000262209|TRPA1	ENSG00000104321|ENST00000262209|TRPA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8270263671875	2	524.825704	1047.63685	-0.038995	-2.0466E-05	2.2661	0.0011893	2.2272	0.0011689	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.69914	1	10522	10522		40.573	5.3719	1	26414000			9677	2125	6814	6822	11151	11151					0.1149416652756372
FTILFQAR	8	Unmodified	_FTILFQAR_					0	0	0			REV__nc|ENSG00000169247|Q8TF17-5|SH3TC2	REV__nc|ENSG00000169247|Q8TF17-5|SH3TC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.77093505859375	2	498.287277	994.560001	2.3766	0.0011842	-2.9571	-0.0014735	-0.58044	-0.00028922	498.28553136511664	25.978	0.30183	25.547	25.439	25.741	-0.4311					10	6	2	0	0	0	0.4196	1	1412	1412		63.306	20.91	1	25067	+		9678	21563	6815	6823	11152	11152					0.06250368031078324
FTITGYFLTVV	11	Unmodified	_FTITGYFLTVV_					0	0	0			REV__ENSG00000183303|ENST00000329434|OR5P2	REV__ENSG00000183303|ENST00000329434|OR5P2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.849853515625	2	630.847364	1259.68018	-0.1784	-0.00011254	3.9414	0.0024864	3.763	0.0023739	630.8497127634344	110.75	1.3676	110.7	110.4	111.77	-0.057182					112	42	4	0	0	0	0.6921	1	12097	12097		32.812	1.1781	1	825620	+		9679	22592	6816	6824	11153	11153					0.060723115141627204
FTITITGDK	9	Unmodified	_FTITITGDK_					0	0	0		ENSG00000143643|ENST00000366661|TTC13;ENST00000471302.2_1_1:231047214-231057243:-|nuORF;nc|ENSG00000143643|Q8NBP0-2|TTC13	ENSG00000143643|ENST00000366661|TTC13	ENSG00000143643|ENST00000366661|TTC13	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.27557373046875	2	498.274032	994.533512	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.937	1	75.062	74.562	75.562	0.12545								0	0	0	0.32469	1	6948	6948		21.96	1.013	1				9680	4655	6817	6825	11154	11154					0.036026343490902946
FTKALSNSRLF	11	Unmodified	_FTKALSNSRLF_					0	0	0		L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|8|1|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|8|1|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|8|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.361572265625	2	642.358962	1282.70337	7.1577	0.0045978	-2.2241	-0.0014287	4.9337	0.0031692	642.357698090965	112.58	0.75734	112.61	112.29	113.05	0.032707					52	25	4	0	0	0	0.7144	1	13630	13630		29.17	2.4771	1	69953			9681	14595	6818	6826	11155	11155					0.0733275035152019
FTKFKICSF	9	Unmodified	_FTKFKICSF_					0	0	0			REV__ENST00000560392.5_1_15:80390802-80390838:+|nuORF	REV__ENST00000560392.5_1_15:80390802-80390838:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.797607421875	2	560.79662	1119.57869	0.65712	0.00036851	1.2304	0.00069001	1.8875	0.0010585	560.7973334997787	80.631	0.5225	80.571	80.319	80.841	-0.059685					20	12	2	0	0	0	0.7932	1	8100	8100		21.96	0.25755	1	133380	+		9682	28762	6819	6827	11156	11156					0.02368161610615971
FTKIFKGVRR	10	Unmodified	_FTKIFKGVRR_					0	0	0		ENSG00000096968|ENST00000381652|JAK2	ENSG00000096968|ENST00000381652|JAK2	ENSG00000096968|ENST00000381652|JAK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3905639648438	2	626.387857	1250.76116	-1.2033	-0.00075372	-0.6277	-0.00039319	-1.831	-0.0011469	626.3871390536368	109.94	1.1883	109.95	109.68	110.87	0.0060501					79	40	3	0	0	0	0.8651	1	11764	11764		25.574	2.0514	1	879220			9683	1744	6820	6828	11157	11157					0.1458105706758488
FTKRKFGLM	9	Unmodified	_FTKRKFGLM_					0	0	0		nc|ENSG00000068305|Q02078|MEF2A;ENSG00000068305|ENST00000557942|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-2|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D;ENSG00000081189|ENST00000504921|MEF2C;chr5:88823930-88884489|43|19.21|0.93|4.38|-|ENST00000502983|MEF2C,MEF2C;nc|ENSG00000116604|Q14814-6|MEF2D;chr5:88882999-88883652|54|15.44|0.59|4.71|-|ENST00000636998|MEF2C,MEF2C;nc|ENSG00000081189|Q06413-3|MEF2C;ENSG00000213999|ENST00000424583|MEF2B;nc|ENSG00000213999|Q02080|MEF2B;ENST00000558983.5_1_15:100173318-100211695:+|nuORF;ENSG00000116604|ENST00000348159|MEF2D;nc|ENSG00000081189|Q06413-4|MEF2C;nc|ENSG00000081189|Q06413-6|MEF2C;nc|ENSG00000081189|Q06413-2|MEF2C;nc|ENSG00000081189|Q06413-5|MEF2C	nc|ENSG00000068305|Q02078|MEF2A;nc|ENSG00000081189|Q06413-4|MEF2C	nc|ENSG00000068305|Q02078|MEF2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.322998046875	2	564.323337	1126.63212	0.82903	0.00046784	-1.22	-0.00068849	-0.391	-0.00022065	564.3225872934454	16.377	0.67253	15.89	15.696	16.369	-0.48718					29	14	4	0	0	0	0.78536	1	130	130		29.15	2.1022	1	729870			9684	1198;14789	6821	6829	11158	11158					0.07386959113136982
FTKRKFGLMKK	11	Unmodified	_FTKRKFGLMKK_					0	0	0		nc|ENSG00000068305|Q02078|MEF2A;ENSG00000068305|ENST00000557942|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-2|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D;ENSG00000081189|ENST00000504921|MEF2C;chr5:88823930-88884489|43|19.21|0.93|4.38|-|ENST00000502983|MEF2C,MEF2C;nc|ENSG00000116604|Q14814-6|MEF2D;chr5:88882999-88883652|54|15.44|0.59|4.71|-|ENST00000636998|MEF2C,MEF2C;nc|ENSG00000081189|Q06413-3|MEF2C;ENSG00000213999|ENST00000424583|MEF2B;nc|ENSG00000213999|Q02080|MEF2B;ENST00000558983.5_1_15:100173318-100211695:+|nuORF;ENSG00000116604|ENST00000348159|MEF2D;nc|ENSG00000081189|Q06413-4|MEF2C;nc|ENSG00000081189|Q06413-6|MEF2C;nc|ENSG00000081189|Q06413-2|MEF2C;nc|ENSG00000081189|Q06413-5|MEF2C	nc|ENSG00000068305|Q02078|MEF2A;nc|ENSG00000081189|Q06413-4|MEF2C	nc|ENSG00000068305|Q02078|MEF2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	461.94873046875	3	461.947959	1382.82205	-0.92016	-0.00042507	1.6451	0.00075997	0.72498	0.0003349	461.9486306999485	107.78	0.26579	107.78	107.61	107.87	0					21	6	4	0	0	0	0.72374	1	11216	11216		27.644	3.4121	1	65565000			9685	1198;14789	6822	6830	11159	11159					0.1459482605548601
FTKRVNIP	8	Unmodified	_FTKRVNIP_					0	0	0			REV__ENST00000392690.3_1_2:168725736-168725883:+|nuORF	REV__ENST00000392690.3_1_2:168725736-168725883:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.79022216796875	2	487.792727	973.5709	-1.0855	-0.00052952	-3.4554	-0.0016855	-4.541	-0.0022151	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.884	1	7630	7630		33.516	0.022601	1	309700	+		9686	26027	6823	6831	11160	11160					0.08305770405377189
FTKRYLRLLFA	11	Unmodified	_FTKRYLRLLFA_					0	0	0			REV__ENSG00000175595|ENST00000311895|ERCC4	REV__ENSG00000175595|ENST00000311895|ERCC4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.62347412109375	3	476.62224	1426.84489	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.94	1	108.03	107.53	108.53	0.084412								0	0	0	0.56276	1	11612	11612		6.6596	0.33873	1		+		9687	22076	6824	6832	11161	11161					0.1485416844463998
FTKVSIKKA	9	Unmodified	_FTKVSIKKA_					0	0	0			REV__ENSG00000128849|ENST00000281282|CGNL1	REV__ENSG00000128849|ENST00000281282|CGNL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.3271789550781	2	511.32386	1020.63317	2.4721	0.001264	3.8453	0.0019662	6.3174	0.0032303	511.3257127043103	97.291	2.1515	97.235	96.802	98.953	-0.055542					136	49	4	0	0	0	0.7932	1	10456	10456		25.574	1.3713	1	1837000	+		9688	18796	6825	6833	11162	11162					0.12367496753711293
FTKYAAQL	8	Unmodified	_FTKYAAQL_					0	0	0		ENSG00000105738|ENST00000222345|SIPA1L3	ENSG00000105738|ENST00000222345|SIPA1L3	ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.25640869140625	2	471.258185	940.501818	-0.36059	-0.00016993	-4.2737	-0.002014	-4.6343	-0.002184	471.2561536641347	29.907	2.3297	29.817	29.233	31.563	-0.089546					133	53	5	0	0	0	0.79403	1	1982	1982		63.306	1.1989	1	8235200			9689	2249	6826	6834	11163	11163					0.029186863857944445
FTKYRLRRERE	11	Unmodified	_FTKYRLRRERE_					0	0	0			REV__ENSG00000169991|ENST00000455833|IFFO2	REV__ENSG00000169991|ENST00000455833|IFFO2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.2704467773438	3	518.626824	1552.85864	-0.024236	-1.2569E-05	-4.3201	-0.0022405	-4.3443	-0.0022531	518.9588934184418	74.611	0.36372	75.17	75.002	75.366	0.55891					18	8	3	0	0	0	0.18276	1	8465	8465		5.1424	0	1	61688	+		9690	21623	6827	6835	11164	11164					0.10432794205780738
FTLHPKLSK	9	Unmodified	_FTLHPKLSK_					0	0	0		nc|ENSG00000243137|Q00888-3|PSG4	nc|ENSG00000243137|Q00888-3|PSG4	nc|ENSG00000243137|Q00888-3|PSG4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.822265625	2	535.821484	1069.62842	-1.2875	-0.00068988	2.5803	0.0013826	1.2928	0.00069271	535.8227210887089	51.077	1.5601	51.077	50.101	51.661	0					63	40	2	0	0	0	0.7932	1	4114	4114		24.519	0.99649	1	293180			9691	15281	6828	6836	11165	11165					0.09638612610933706
FTLIALFLCL	10	Unmodified	_FTLIALFLCL_					0	0	0			REV__nc|ENSG00000268758|Q86SQ3|ADGRE4P	REV__nc|ENSG00000268758|Q86SQ3|ADGRE4P	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.125732421875	2	577.338121	1152.66169	0.66228	0.00038236	2.4351	0.0014058	3.0973	0.0017882	577.34102559195	31.078	0.12339	31.075	31.038	31.162	-0.0022545					11	5	3	0	0	0	0.37624	1	1409	1409		23.042	11.531	1	91775	+		9692	30259	6829	6837	11166	11166					0.09146478338630004
FTLIKRWP	8	Unmodified	_FTLIKRWP_					0	0	0			REV__ENSG00000166012|ENST00000448108|TAF1D	REV__ENSG00000166012|ENST00000448108|TAF1D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.8212280273438	2	530.818744	1059.62294	0.64608	0.00034295	3.3079	0.0017559	3.954	0.0020988	530.820506018963	80.205	1.3856	80.261	79.781	81.166	0.055916					85	34	3	0	0	0	0.884	1	7951	7951		33.516	4.366	1	627060	+		9693	21242	6830	6838	11167	11167					0.09550933819105012
FTLIPLVAF	9	Unmodified	_FTLIPLVAF_					0	0	0			REV__ENST00000490536.1_1_2:219257709-219258917:+|nuORF	REV__ENST00000490536.1_1_2:219257709-219258917:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.3277587890625	2	510.810054	1019.60555	1.6405	0.000838	4.0456	0.0020665	5.6862	0.0029045	510.8120106872695	97.343	0.85968	97.729	97.32	98.18	0.38548					35	20	2	0	0	0	0.20789	1	11641	11641		16.473	0	1	493140	+		9694	16223	6831	6839	11168	11168					0.09653593493476365
FTLIPLVAF	9	Unmodified	_FTLIPLVAF_					0	0	0			REV__ENST00000490536.1_1_2:219257709-219258917:+|nuORF	REV__ENST00000490536.1_1_2:219257709-219258917:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.32781982421875	2	510.810054	1019.60555	1.6666	0.00085131	3.9732	0.0020295	5.6398	0.0028808	510.811944213561	97.41	0.97795	97.8	97.403	98.381	0.39065					46	23	3	0	0	0	0.20789	1	11709	11709		40.573	16.37	1	555310	+		9695	16223	6831	6839	11169	11169					0.09653593493476365
FTLIYGRLPE	10	Unmodified	_FTLIYGRLPE_					0	0	0			REV__nc|ENSG00000064651|P55011-3|SLC12A2	REV__nc|ENSG00000064651|P55011-3|SLC12A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.8929138183594	3	403.560646	1207.66011	2.8514	0.0011507	-4.3616	-0.0017602	-1.5102	-0.00060945	403.5587881215693	22.775	1.0826	22.725	22.354	23.437	-0.050077					94	41	3	0	0	0	0.86207	1	745	745		24.232	0.85391	1	140620	+		9696	16480	6832	6840	11170	11170					0.06458560574219518
FTLKQTFSPKF	11	Unmodified	_FTLKQTFSPKF_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-6|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.58538818359375	3	448.583451	1342.72852	0.43253	0.00019403	2.8476	0.0012774	3.2802	0.0014714	448.5848421046633	16.234	0.32049	15.635	15.465	15.786	-0.59873					11	6	3	0	0	0	0.75457	1	108	108		21.032	0	1	96122	+		9697	29947	6833	6841	11171	11171					0.07086805154085596
FTLKQTFSPKF	11	Unmodified	_FTLKQTFSPKF_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-6|TTN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	448.583451	1342.72852	-0.19605	-8.7946E-05	2.9428	0.0013201	2.7468	0.0012321	448.58469790378075	16.206	0.21478	15.719	15.607	15.821	-0.48718	0.042	9.5738E-05	NaN	21.032	12	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127710	+		9698	29947	6833	6841							0.07086805154085596
FTLKQTFSPKF	11	Unmodified	_FTLKQTFSPKF_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-6|TTN	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	448.583451	1342.72852	0.43253	0.00019403	2.8476	0.0012774	3.2802	0.0014714	448.5848421046633	16.234	0.32049	15.635	15.465	15.786	-0.59873	-0.042	-3.235E-05	NaN	21.032	11	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96122	+		9699	29947	6833	6841							0.07086805154085596
FTLLIGLP	8	Unmodified	_FTLLIGLP_					0	0	0			REV__ENSG00000180638|ENST00000433844|SLC47A2	REV__ENSG00000180638|ENST00000433844|SLC47A2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.265380859375	2	437.275847	872.537141	0.46596	0.00020375	2.5957	0.001135	3.0616	0.0013388	437.2769449181165	23.865	0.11193	23.867	23.785	23.897	0.001894					5	4	2	0	0	0	0.4196	1	780	780		14.664	0	1	22528	+		9700	22406	6834	6842	11172	11172					0.09577348913614969
FTLLRPHK	8	Unmodified	_FTLLRPHK_					0	0	0			REV__nc|ENSG00000140199|Q9UHW9-6|SLC12A6	REV__nc|ENSG00000140199|Q9UHW9-6|SLC12A6	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3089294433594	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.374	1	63.497	62.997	63.997	0.12252								0	0	0	0.2939	1	5554	5554		27.882	0	1		+		9701	19600	6835	6843	11173	11173					0.0976576315931652
FTLLRSSRPK	10	Unmodified	_FTLLRSSRPK_					0	0	0			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	603.8406372070312	2	602.861672	1203.70879	2.2814	0.0013754	4.4251	0.0026677	6.7065	0.0040431	603.3652022575931	102.45	0.38173	102.71	102.44	102.82	0.26322					13	8	2	0	0	0	0.37624	1	12441	12441		30.318	4.2543	1	214500	+		9702	17810	6836	6844	11174	11174					0.11508473933963614
FTLLRSSRPK	10	Unmodified	_FTLLRSSRPK_					0	0	0			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	602.861672	1203.70879	-0.18054	-0.00010884	8.8448	0.0053322	8.6642	0.0052233	602.8668945091663	102.9	0.24698	102.9	102.71	102.96	0	0.11059	0.0014157	NaN	30.318	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120860	+		9703	17810	6836	6844							0.11508473933963614
FTLLRSSRPK	10	Unmodified	_FTLLRSSRPK_					0	0	0			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	602.861672	1203.70879	-0.50382	-0.00030373	8.8947	0.0053623	8.3909	0.0050585	602.8673068701239	102.89	0.53059	102.89	102.59	103.12	0.0082016	0.10384	0.0014759	NaN	30.318	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	167830	+		9704	17810	6836	6844							0.11508473933963614
FTLLRSSRPK	10	Unmodified	_FTLLRSSRPK_					0	0	0			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	602.861672	1203.70879	3.2257	0.0019447	5.0743	0.0030591	8.3001	0.0050038	602.8645280803236	102.75	0.65656	102.71	102.38	103.03	-0.047005	-0.085158	-0.0031304	NaN	30.318	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156100	+		9705	17810	6836	6844							0.11508473933963614
FTLLRSSRPK	10	Unmodified	_FTLLRSSRPK_					0	0	0			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	602.861672	1203.70879	-0.19745	-0.00011904	8.7464	0.0052729	8.5489	0.0051538	602.8670211957258	102.66	0.56969	102.7	102.37	102.94	0.043198	-0.086679	0.001297	NaN	30.318	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156070	+		9706	17810	6836	6844							0.11508473933963614
FTLLRSSRPK	10	Unmodified	_FTLLRSSRPK_					0	0	0			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	602.861672	1203.70879	1.0231	0.00061677	7.3739	0.0044455	8.397	0.0050622	602.866020422373	102.59	0.60783	102.79	102.33	102.94	0.19484	-0.0017659	-0.00035774	NaN	30.318	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	207580	+		9707	17810	6836	6844							0.11508473933963614
FTLLRSSRPK	10	Unmodified	_FTLLRSSRPK_					0	0	0			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	602.861672	1203.70879	0.9032	0.00054451	7.9721	0.0048061	8.8753	0.0053506	602.8663827538342	102.67	0.57423	102.79	102.48	103.05	0.12622	0.0027244	0.00036346	NaN	30.318	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156270	+		9708	17810	6836	6844							0.11508473933963614
FTLLRSSRPK	10	Unmodified	_FTLLRSSRPK_					0	0	0			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	602.861672	1203.70879	-1.28	-0.00077166	9.8411	0.0059328	8.5611	0.0051611	602.8676639248511	102.69	0.59766	102.82	102.45	103.05	0.13569	0.034178	0.0026169	NaN	30.318	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	170440	+		9709	17810	6836	6844							0.11508473933963614
FTLLSLSA	8	Unmodified	_FTLLSLSA_					0	0	0			REV__nc|ENSG00000184831|Q9BUR5-2|APOO	REV__nc|ENSG00000184831|Q9BUR5-2|APOO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.2456970214844	2	426.247286	850.48002	1.0559	0.00045007	-3.9444	-0.0016813	-2.8885	-0.0012312	426.2455229557475	87.647	3.9379	87.573	85.625	89.563	-0.074005					153	92	2	0	0	0	0.87922	1	9164	9164		31.955	0	1	4306400	+		9710	22703	6837	6845	11175	11175					0.048798816372254805
FTLNKGTLN	9	Unmodified	_FTLNKGTLN_					0	0	0		ENST00000299413.6_1_11:35832336-35832669:+|nuORF	ENST00000299413.6_1_11:35832336-35832669:+|nuORF	ENST00000299413.6_1_11:35832336-35832669:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3444519042969	2	504.279649	1006.54475	-0.23686	-0.00011944	2.3794	0.0011999	2.1426	0.0010805	504.281507220074	53.068	0.37251	53.482	53.291	53.663	0.4139					11	8	2	0	0	0	0.20789	1	5334	5334		32.812	0	1	49041			9711	9781	6838	6846	11176	11176					0.0417345644324314
FTLPLRVAA	9	Unmodified	_FTLPLRVAA_					0	0	0		nc|ENSG00000182240|Q9Y5Z0-3|BACE2;nc|ENSG00000182240|Q9Y5Z0-2|BACE2;ENSG00000182240|ENST00000330333|BACE2	nc|ENSG00000182240|Q9Y5Z0-3|BACE2	nc|ENSG00000182240|Q9Y5Z0-3|BACE2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.30108642578125	2	494.302927	986.591301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.544	1	15.461	14.961	15.961	-0.083363								0	0	0	0.32159	1	54	54		23.042	2.0956	1				9712	7438	6839	6847	11177	11177					0.09746941065179726
FTLRLESKL	9	Unmodified	_FTLRLESKL_					0	0	0			REV__ENSG00000150893|ENST00000280481|FREM2	REV__ENSG00000150893|ENST00000280481|FREM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8307495117188	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.76764	1	8947	8947		34.173	1.3601	1	3935500	+		9713	20223	6840	6848	11178	11178					0.10094577919812764
FTLRLESKL	9	Unmodified	_FTLRLESKL_					0	0	0			REV__ENSG00000150893|ENST00000280481|FREM2	REV__ENSG00000150893|ENST00000280481|FREM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8296508789062	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.73802	1	8860	8860		37.812	1.3648	1	2008100	+		9714	20223	6840	6848	11179	11179					0.10094577919812764
FTLTVTSL	8	Unmodified	_FTLTVTSL_					0	0	0		ENSG00000266338|ENST00000581897|NBPF15;nc|ENSG00000273136|B4DH59|NBPF26;nc|ENSG00000270629|Q5TI25|NBPF14;nc|ENSG00000269713|P0DPF3-2|NBPF9;ENSG00000269713|ENST00000698832|NBPF9;ENSG00000273136|ENST00000620612|NBPF26;ENSG00000268043|ENST00000698835|NBPF12;ENST00000491285.1_1:146215077-146250826:-|nuORF;ENSG00000270629|ENST00000619423|NBPF14;ENSG00000271425|ENST00000583866|NBPF10;ENSG00000271383|ENST00000651566|NBPF19;nc|ENSG00000162825|P0DPF2|NBPF20;ENSG00000162825|ENST00000698833|NBPF20	ENSG00000266338|ENST00000581897|NBPF15	ENSG00000266338|ENST00000581897|NBPF15	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2408752441406	2	441.252569	880.490584	-0.15539	-6.8564E-05	-1.6995	-0.00074993	-1.8549	-0.00081849	441.2529585270127	82.3	0.2199	82.366	82.22	82.44	0.065918					8	4	3	0	0	0	0.4196	1	8119	8119		24.203	5.8783	1	13136			9715	5741	6841	6849	11180	11180					0.04555864291671696
FTLYILTALI	10	Unmodified	_FTLYILTALI_					0	0	0			REV__ENST00000359353.9_1_17:61851672-61869869:+|nuORF	REV__ENST00000359353.9_1_17:61851672-61869869:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	584.357177734375	2	584.354825	1166.6951	0.73697	0.00043065	1.3258	0.00077475	2.0628	0.0012054	584.3556286390271	92.429	3.0487	92.654	91.107	94.155	0.22547					201	72	4	0	0	0	0.85694	1	9349	9349		21.96	1.9631	1	730880	+		9716	25458	6842	6850	11181	11181					0.11841803382162652
FTLYQRQMI	9	Unmodified	_FTLYQRQMI_					0	0	0			REV__ENSG00000109586|ENST00000265000|GALNT7	REV__ENSG00000109586|ENST00000265000|GALNT7	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	600.483642578125	2	600.315709	1198.61686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.089	1	57.195	56.695	57.695	0.1055								0	0	0	0.28772	1	4831	4831		35.618	0.46626	1		+		9717	17763	6843	6851	11182	11182					0.025500475253011246
FTMLCWWPTQ	10	Unmodified	_FTMLCWWPTQ_					0	0	0			REV__nc|ENSG00000100987|Q9NZR4-8|VSX1	REV__nc|ENSG00000100987|Q9NZR4-8|VSX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2624816894531	3	438.199955	1311.57804	-1.2608	-0.00055249	1.6917	0.00074132	0.43093	0.00018883	438.2004777015647	40.807	0.13917	41.396	41.312	41.451	0.58915					5	3	2	0	0	0	0.37624	1	3529	3529		23.378	0	1	449310	+		9718	29742	6844	6852	11183	11183					-0.06529001100739151
FTMSSGGH	8	Unmodified	_FTMSSGGH_					0	0	0			REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF	REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.1784362792969	2	412.173795	822.333038	1.126	0.00046411	4.0235	0.0016584	5.1494	0.0021225	412.17525113694785	87.245	0.50133	87.691	87.347	87.849	0.44629					19	11	2	0	0	0	0.4196	1	10210	10210		20.482	0	1	218270	+		9719	20165	6845	6853	11184	11184					-0.085235385193414
FTNIAKIRAM	10	Unmodified	_FTNIAKIRAM_					0	0	0			REV__nc|ENSG00000161813|Q71RC2-7|LARP4	REV__nc|ENSG00000161813|Q71RC2-7|LARP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8324584960938	2	582.831526	1163.6485	-0.83199	-0.00048491	2.73	0.0015911	1.898	0.0011062	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.86106	1	9858	9858		33.922	2.3918	1	796430	+		9720	20781	6846	6854	11185	11185					0.07322040279223074
FTNIAKIRAM	10	Unmodified	_FTNIAKIRAM_					0	0	0			REV__nc|ENSG00000161813|Q71RC2-7|LARP4	REV__nc|ENSG00000161813|Q71RC2-7|LARP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8327026367188	2	582.831526	1163.6485	0.11318	6.5963E-05	1.8423	0.0010737	1.9554	0.0011397	582.8325626554922	94.252	3.4585	94.298	93.323	96.781	0.046173					208	81	3	0	0	0	0.70553	2	9925	9890;9925		44.377	9.9293	1	743970	+		9721	20781	6846	6854	11186;11187	11187					0.07322040279223074
FTNIAKIRAM	10	Unmodified	_FTNIAKIRAM_					0	0	0			REV__nc|ENSG00000161813|Q71RC2-7|LARP4	REV__nc|ENSG00000161813|Q71RC2-7|LARP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.8341064453125	2	582.831526	1163.6485	-1.3452	-0.00078404	3.291	0.0019181	1.9457	0.001134	582.8334573704366	94.259	3.5437	94.457	93.113	96.657	0.19827					191	84	3	0	0	0	0.64457	2	9523	9523;9569		47.657	13.485	1	775360	+		9722	20781	6846	6854	11188;11189	11188					0.07322040279223074
FTNSIFIRLK	10	Unmodified	_FTNSIFIRLK_					0	0	0			REV__ENST00000547247.5_1_12:50479152-50482438:+|nuORF	REV__ENST00000547247.5_1_12:50479152-50482438:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8680419921875	2	619.866423	1237.71829	1.6172	0.0010025	2.9706	0.0018414	4.5878	0.0028438	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.8651	1	11133	11133		25.574	1.0549	1	1541100	+		9723	16516	6847	6855	11190	11190					0.10894242219478656
FTPIYLALLV	10	Unmodified	_FTPIYLALLV_					0	0	0		nc|ENSG00000103056|Q9NY59-2|SMPD3;ENSG00000103056|ENST00000219334|SMPD3	nc|ENSG00000103056|Q9NY59-2|SMPD3	nc|ENSG00000103056|Q9NY59-2|SMPD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.3456420898438	2	575.349543	1148.68453	-1.0089	-0.00058045	-3.3913	-0.0019512	-4.4001	-0.0025316	575.3486096870474	98.837	5.2928	98.887	98.351	103.64	0.04982					239	125	5	0	0	0	0.81018	1	10473	10473		38.806	7.2763	1	4222200			9724	2050	6848	6856	11191	11191					0.11613820727734492
FTPKPGLI	8	Unmodified	_FTPKPGLI_					0	0	0			REV__ENSG00000044090|ENST00000265348|CUL7	REV__ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.76324462890625	2	436.765646	871.516739	-0.35586	-0.00015543	-3.4646	-0.0015132	-3.8204	-0.0016686	436.7638852040378	26.362	1.501	26.324	25.89	27.391	-0.038525					58	34	3	0	0	0	0.84341	1	1210	1210		24.203	1.1603	1	147430	+		9725	16340	6849	6857	11192	11192					0.0758417825380775
FTPLALLPVVF	11	Unmodified	_FTPLALLPVVF_					0	0	0		ENSG00000158296|ENST00000279027|SLC13A3;nc|ENSG00000158296|Q8WWT9-2|SLC13A3;nc|ENSG00000158296|Q8WWT9-4|SLC13A3;nc|ENSG00000158296|Q8WWT9-5|SLC13A3	ENSG00000158296|ENST00000279027|SLC13A3	ENSG00000158296|ENST00000279027|SLC13A3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2485656738281	3	406.249521	1215.72673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.21	1	114.17	113.67	114.67	-0.044777								0	0	0	0.56276	1	12209	12209		31.634	10.602	1				9726	5471	6850	6858	11193	11193					0.1274979613610867
FTPLALLPVVF	11	Unmodified	_FTPLALLPVVF_					0	0	0		ENSG00000158296|ENST00000279027|SLC13A3;nc|ENSG00000158296|Q8WWT9-2|SLC13A3;nc|ENSG00000158296|Q8WWT9-4|SLC13A3;nc|ENSG00000158296|Q8WWT9-5|SLC13A3	ENSG00000158296|ENST00000279027|SLC13A3	ENSG00000158296|ENST00000279027|SLC13A3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2487487792969	3	406.249521	1215.72673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.31	1	114.27	113.77	114.77	-0.044777								0	0	0	0.56276	1	12222	12222		19.263	2.7328	1				9727	5471	6850	6858	11194	11194					0.1274979613610867
FTPLVVRSL	9	Unmodified	_FTPLVVRSL_					0	0	0			REV__ENST00000534491.5_1_11:3114755-3187956:-|nuORF	REV__ENST00000534491.5_1_11:3114755-3187956:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.31396484375	2	516.316035	1030.61752	-0.68072	-0.00035146	-3.5737	-0.0018451	-4.2544	-0.0021966	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.78983	1	10054	10054		27.882	2.3082	1	39641000	+		9728	16241	6851	6859	11195	11195					0.10343210236646883
FTPLVVRSL	9	Unmodified	_FTPLVVRSL_					0	0	0			REV__ENST00000534491.5_1_11:3114755-3187956:-|nuORF	REV__ENST00000534491.5_1_11:3114755-3187956:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3129272460938	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.3064	-0.0011908	-3.8683	-0.0019972	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.77244	1	10768	10768		32.812	10.853	1	1268100	+		9729	16241	6851	6859	11196	11196					0.10343210236646883
FTPPITHSTI	10	Unmodified	_FTPPITHSTI_					0	0	0			REV__nc|ENSG00000169876|Q685J3-2|MUC17	REV__nc|ENSG00000169876|Q685J3-2|MUC17	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.8301391601562	2	557.300581	1112.58661	-0.9666	-0.00053869	-2.2762	-0.0012685	-3.2428	-0.0018072	557.2988893248723	101.13	0.74242	101.16	100.79	101.53	0.031036					37	17	3	0	0	0	0.37624	1	10787	10787		19.104	1.7386	1	158200	+		9730	21610	6852	6860	11197	11197					0.03482012131757983
FTPQNGPLF	9	Unmodified	_FTPQNGPLF_					0	0	0			REV__ENST00000553564.5_1_14:21458178-21458547:+|nuORF	REV__ENST00000553564.5_1_14:21458178-21458547:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.7572021484375	2	510.761092	1019.50763	0.055106	2.8146E-05	-4.2521	-0.0021718	-4.197	-0.0021437	510.7592008059974	28.508	0.59175	28.487	28.117	28.709	-0.021439					11	9	2	0	0	0	0.74721	1	1372	1372		37.159	9.2769	1	25369	+		9731	28648	6853	6861	11198	11198					-0.001342151025255589
FTPSLAQLVGN	11	Unmodified	_FTPSLAQLVGN_					0	0	0			REV__ENST00000416600.6_1_20:3852035-3852320:+|nuORF	REV__ENST00000416600.6_1_20:3852035-3852320:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8107299804688	2	573.811313	1145.60807	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.334	1	31.324	30.824	31.824	-0.010656								0	0	0	0.56276	1	1705	1705		28.081	2.5074	1		+		9732	26435	6854	6862	11199	11199					0.04109397160482331
FTQACFKLI	9	Carbamidomethyl (C)	_FTQAC(Carbamidomethyl (C))FKLI_	FTQAC(1)FKLI		FTQAC(44)FKLI		0	1	0			REV__ENSG00000146350|ENST00000398212|TBC1D32	REV__ENSG00000146350|ENST00000398212|TBC1D32	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.302001953125	2	564.299527	1126.5845	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.376	1	67.341	66.841	67.841	-0.035698								0	0	0	0.32039	1	6467	6467		44.117	10.624	1		+		9733	20007	6855	6863	11200	11200	250				0.02627260122289954
FTQNSHLAR	9	Unmodified	_FTQNSHLAR_					0	0	0		ENSG00000197937|ENST00000334197|ZNF347;nc|ENSG00000197937|Q96SE7-2|ZNF347	ENSG00000197937|ENST00000334197|ZNF347	ENSG00000197937|ENST00000334197|ZNF347	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7975463867188	2	537.277972	1072.54139	-0.95314	-0.0005121	-3.5608	-0.0019131	-4.5139	-0.0024252	537.7769123699167	57.009	0.24748	57.405	57.329	57.576	0.39672					7	5	2	0	0	0	0.20789	1	5919	5919		11.511	0	1	116810			9734	8215	6856	6864	11201	11201					0.008022063892212827
FTQRLPVI	8	Unmodified	_FTQRLPVI_					0	0	0		nc|ENSG00000137968|Q8NCS7|SLC44A5;nc|ENSG00000137968|Q8NCS7-5|SLC44A5;ENSG00000137968|ENST00000370859|SLC44A5	nc|ENSG00000137968|Q8NCS7|SLC44A5	nc|ENSG00000137968|Q8NCS7|SLC44A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.2932434082031	2	487.295102	972.575651	-0.95022	-0.00046304	-3.0573	-0.0014898	-4.0076	-0.0019529	487.2934854308046	90.996	2.8908	91.042	90.474	93.365	0.046448					155	69	4	0	0	0	0.87922	1	9474	9474		31.955	0	1	2321800			9735	14949	6857	6865	11202	11202					0.08826654548113311
FTQSVVGTN	9	Unmodified	_FTQSVVGTN_					0	0	0			REV__nc|ENSG00000168032|O75355-2|ENTPD3	REV__nc|ENSG00000168032|O75355-2|ENTPD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.7411193847656	2	476.740357	951.46616	0.12568	5.9919E-05	4.3539	0.0020757	4.4796	0.0021356	476.7422323018569	78.776	0.58596	78.723	78.44	79.026	-0.053551					30	14	3	0	0	0	0.76255	1	7851	7851		35.618	3.6634	1	138270	+		9736	21453	6858	6866	11203	11203					-0.011513958618479592
FTQTLRAPL	9	Unmodified	_FTQTLRAPL_					0	0	0			REV__nc|ENSG00000011523|Q76N32-2|CEP68	REV__nc|ENSG00000011523|Q76N32-2|CEP68	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.803955078125	2	523.803291	1045.59203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.117	1	15.034	14.534	15.534	-0.083363								0	0	0	0.32469	1	11	11		21.96	1.013	1		+		9737	29674	6859	6867	11204	11204					0.07105735714230832
FTRFVRVGVP	10	Unmodified	_FTRFVRVGVP_					0	0	0		ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF	ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.0042724609375	2	589.345658	1176.67676	-1.3242	-0.00078038	-3.1537	-0.0018586	-4.4778	-0.002639	589.3435538038957	101.59	0.88985	101.75	101.5	102.39	0.15505					33	21	2	0	0	0	0.37624	1	10636	10636		14.865	0	1	128440			9738	849	6860	6868	11205	11205					0.09549106250847217
FTRGSLEDL	9	Unmodified	_FTRGSLEDL_					0	0	0		ENSG00000110237|ENST00000263674|ARHGEF17	ENSG00000110237|ENST00000263674|ARHGEF17	ENSG00000110237|ENST00000263674|ARHGEF17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.13916015625	2	519.266739	1036.51892	0.027879	1.4477E-05	3.8675	0.0020083	3.8954	0.0020227	519.2690827373162	81.157	0.56946	81.657	81.258	81.827	0.49966					19	13	2	0	0	0	0.20789	1	9356	9356		24.519	0	1	153720			9739	2516	6861	6869	11206	11206					0.00212562200931643
FTRLLAAH	8	Unmodified	_FTRLLAAH_					0	0	0		nc|ENSG00000292373|Q01113-3|IL9R	nc|ENSG00000292373|Q01113-3|IL9R	nc|ENSG00000292373|Q01113-3|IL9R	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.253662109375	2	464.771794	927.529036	-0.84255	-0.00039159	-0.59101	-0.00027469	-1.4336	-0.00066628	464.77145179836293	83.749	0.50495	84.184	83.96	84.465	0.43538					15	11	2	0	0	0	0.4196	1	9694	9694		24.203	15.38	1	58941			9740	15349	6862	6870	11207	11207					0.06237214716838935
FTRLPLKR	8	Unmodified	_FTRLPLKR_					0	0	0		ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000064601|P10619-2|CTSA;ENST00000480961.1_1_20:44522693-44523773:+|nuORF	ENSG00000064601|ENST00000646241|CTSA	ENSG00000064601|ENST00000646241|CTSA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.793212890625	2	515.829643	1029.64473	0.92441	0.00047684	-2.1058	-0.0010862	-1.1814	-0.0006094	515.8281200710676	88.245	0.19794	88.694	88.555	88.753	0.44893					6	4	2	0	0	0	0.4196	1	10390	10390		11.511	0	1	52976			9741	1105	6863	6871	11208	11208					0.1310973856768669
FTRSFASLSFL	11	Unmodified	_FTRSFASLSFL_					0	0	0		ENST00000456198.1_1_9:26955814-26955988:-|nuORF	ENST00000456198.1_1_9:26955814-26955988:-|nuORF	ENST00000456198.1_1_9:26955814-26955988:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	638.3167114257812	2	638.340238	1274.66592	-0.94261	-0.00060171	2.5885	0.0016523	1.6459	0.0010506	638.8434162393863	72.329	0.20924	72.715	72.541	72.75	0.38581					5	4	2	0	0	0	0.15252	1	8053	8053		65.465	1.9315	1	51461			9742	11964	6864	6872	11209	11209					0.0395765908588146
FTRTNKMG	8	Unmodified	_FTRTNKMG_					0	0	0		ENST00000513752.5_1_4:183064608-183064957:-|nuORF	ENST00000513752.5_1_4:183064608-183064957:-|nuORF	ENST00000513752.5_1_4:183064608-183064957:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.9683837890625	2	477.744919	953.475285	-0.071144	-3.3989E-05	-2.946	-0.0014074	-3.0172	-0.0014414	477.7428261454946	28.568	0.47159	28.395	28.16	28.631	-0.17336					16	11	2	0	0	0	0.4196	1	1718	1718		29.15	0	1	77646			9743	13060	6865	6873	11210	11210					-0.003313257771651479
FTRVIVLYTLA	11	Unmodified	_FTRVIVLYTLA_					0	0	0		ENST00000487806.5_1_1:84964021-84964084:-|nuORF	ENST00000487806.5_1_1:84964021-84964084:-|nuORF	ENST00000487806.5_1_1:84964021-84964084:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.2552185058594	3	432.595579	1294.76491	4.8424	0.0020948	1.6331	0.00070646	6.4755	0.0028013	432.5961658904841	106.96	1.4015	107.11	106.57	107.97	0.14929					96	55	2	0	0	0	0.17387	1	13156	13156		26.75	0	1	846100			9744	12608	6866	6874	11211	11211					0.12931682050816562
FTSEVVTFI	9	Unmodified	_FTSEVVTFI_					0	0	0		ENSG00000172324|ENST00000302040|OR5A2	ENSG00000172324|ENST00000302040|OR5A2	ENSG00000172324|ENST00000302040|OR5A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.7771606445312	2	521.776408	1041.53826	2.2085	0.0011523	-2.7102	-0.0014141	-0.50173	-0.00026179	521.7749538338597	102.58	0.31786	102.81	102.61	102.93	0.22556					17	8	3	0	0	0	0.47272	1	12455	12455		53.351	2.016	1	490220			9745	6761	6867	6875	11212	11212					0.019155184918645318
FTSIFVSTD	9	Unmodified	_FTSIFVSTD_					0	0	0			REV__ENST00000564436.5_1_16:732796-733478:-|nuORF	REV__ENST00000564436.5_1_16:732796-733478:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.28070068359375	2	508.75039	1015.48623	-0.5303	-0.00026979	0.98137	0.00049927	0.45107	0.00022948	508.75088464180527	88.786	0.88769	89.257	88.916	89.803	0.47068					36	21	2	0	0	0	0.20789	1	10495	10495		10.265	0	1	209920	+		9746	20789	6868	6876	11213	11213					-0.020896449218980706
FTSKSHLVGKK	11	Unmodified	_FTSKSHLVGKK_					0	0	0		L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|56|2|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|56|2|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|56|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.242431640625	3	411.243429	1230.70846	2.5653	0.001055	-1.8951	-0.00077935	0.67023	0.00027563	411.2424876891329	102.75	0.89561	102.98	102.74	103.63	0.22556					34	27	2	0	0	0	0.75779	1	12482	12482		20.315	0.28454	1	2184900			9747	14593	6869	6877	11214	11214					0.10233054214108961
FTSLFFKV	8	Unmodified	_FTSLFFKV_					0	0	0			REV__ENST00000359314.5_1_6:47501434-47512410:+|nuORF	REV__ENST00000359314.5_1_6:47501434-47512410:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7803955078125	2	494.778754	987.542954	-0.60525	-0.00029947	3.5756	0.0017691	2.9703	0.0014696	494.7803656183054	83.829	2.2213	83.994	82.644	84.865	0.1651					103	51	3	0	0	0	0.87479	1	8126	8126		30.504	5.0535	1	285340	+		9748	25457	6870	6878	11215	11215					0.048684474252809196
FTSNRAIKA	9	Unmodified	_FTSNRAIKA_					0	0	0			REV__ENST00000256383.8_1_14:67826867-67826942:+|nuORF	REV__ENST00000256383.8_1_14:67826867-67826942:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.244384765625	2	504.285266	1006.55598	1.3811	0.00069647	-1.4394	-0.00072588	-0.058319	-2.9409E-05	504.28445768818233	32.684	0.97336	32.896	32.593	33.566	0.21168					29	22	2	0	0	0	0.20789	1	2277	2277		27.882	0	1	231820	+		9749	24323	6871	6879	11216	11216					0.052962785373551924
FTSNRAIKA	9	Unmodified	_FTSNRAIKA_					0	0	0			REV__ENST00000256383.8_1_14:67826867-67826942:+|nuORF	REV__ENST00000256383.8_1_14:67826867-67826942:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	504.285266	1006.55598	-0.14623	-7.3742E-05	0.83182	0.00041948	0.68559	0.00034573	504.28520005686215	32.754	0.55248	32.88	32.634	33.186	0.12643	-0.0078091	0.0013661	NaN	27.882	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	182700	+		9750	24323	6871	6879							0.052962785373551924
FTSRRGKAKL	10	Unmodified	_FTSRRGKAKL_					0	0	0			REV__nc|ENSG00000179397|Q5SY80-2|CATSPERE	REV__nc|ENSG00000179397|Q5SY80-2|CATSPERE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3540649414062	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.8608	1	12726	12726		34.173	15.069	1	3937500	+		9751	22335	6872	6880	11217	11217					0.11863607136797327
FTSTQNGG	8	Unmodified	_FTSTQNGG_					0	0	0			REV__nc|ENSG00000262085|Q8NH06|OR1P1	REV__nc|ENSG00000262085|Q8NH06|OR1P1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.1844787597656	2	406.182675	810.350796	0.058799	2.3883E-05	0.42455	0.00017244	0.48335	0.00019633	406.18265058514055	25.838	0.93217	25.944	25.442	26.374	0.1054					58	44	2	0	0	0	0.84341	1	976	976		24.203	1.1603	1	53576	+		9752	30252	6873	6881	11218	11218					-0.06196499992847748
FTSYVKNV	8	Unmodified	_FTSYVKNV_					0	0	0		ENSG00000110429|ENST00000265651|FBXO3;nc|ENSG00000110429|Q9UK99-3|FBXO3;nc|ENSG00000110429|Q9UK99-2|FBXO3	ENSG00000110429|ENST00000265651|FBXO3	ENSG00000110429|ENST00000265651|FBXO3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2774353027344	2	479.255643	956.496732	-0.098385	-4.7152E-05	3.9069	0.0018724	3.8085	0.0018253	479.2584359915668	84.071	0.26079	84.138	83.986	84.247	0.066719					7	5	2	0	0	0	0.4196	1	8367	8367		12.207	0.69583	1	121160			9753	2529	6874	6882	11219	11219					0.016743825231856135
FTTSKLQSF	9	Unmodified	_FTTSKLQSF_					0	0	0		ENSG00000076242|ENST00000231790|MLH1;ENST00000454028.5_1_3:37035144-37045944:+|nuORF;ENST00000435176.5_1_3:37035370-37045944:+|nuORF;ENST00000539477.5_1_3:37035370-37053334:+|nuORF;ENST00000466900.5_1_3:37035370-37047454:+|nuORF	ENSG00000076242|ENST00000231790|MLH1	ENSG00000076242|ENST00000231790|MLH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.7779541015625	2	529.779482	1057.54441	0.30806	0.0001632	-0.16672	-8.8323E-05	0.14134	7.4879E-05	529.7792376545807	64.462	0.86823	64.428	63.938	64.807	-0.034256					51	22	3	0	0	0	0.73802	1	6178	6178		37.812	5.8567	1	324590			9754	1353	6875	6883	11220	11220					0.017940367233904908
FTVDFSRAKLL	11	Unmodified	_FTVDFSRAKLL_					0	0	0			REV__nc|ENSG00000166484|Q13164-3|MAPK7	REV__nc|ENSG00000166484|Q13164-3|MAPK7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.871826171875	2	648.869163	1295.72377	0.93377	0.00060589	2.7296	0.0017712	3.6634	0.0023771	648.8712589757642	99.284	2.1869	99.441	98.679	100.87	0.15659					107	50	3	0	0	0	0.60058	1	10419	10419		44.377	16.296	1	221690	+		9755	27639	6876	6884	11221	11221					0.08773921011311359
FTVFLLVPL	9	Unmodified	_FTVFLLVPL_					0	0	0		ENST00000373264.4_1_9:130552005-130552332:+|nuORF	ENST00000373264.4_1_9:130552005-130552332:+|nuORF	ENST00000373264.4_1_9:130552005-130552332:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8265991210938	2	524.825704	1047.63685	-0.038995	-2.0466E-05	2.2661	0.0011893	2.2272	0.0011689	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.77546	1	10884	10884		31.955	5.1588	1	26414000			9756	10736	6877	6885	11222	11222					0.1149416652756372
FTVFLLVPL	9	Unmodified	_FTVFLLVPL_					0	0	0		ENST00000373264.4_1_9:130552005-130552332:+|nuORF	ENST00000373264.4_1_9:130552005-130552332:+|nuORF	ENST00000373264.4_1_9:130552005-130552332:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8269653320312	2	524.825704	1047.63685	0.8139	0.00042716	1.4579	0.00076513	2.2718	0.0011923	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.76402	2	10280	10280;10292		35.201	1.6851	1	27719000			9757	10736	6877	6885	11223;11224	11223					0.1149416652756372
FTVHKQIKVVN	11	Unmodified	_FTVHKQIKVVN_					0	0	0			REV__nc|ENSG00000140105|P23381-2|WARS1	REV__nc|ENSG00000140105|P23381-2|WARS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2731628417969	3	438.262712	1311.76631	-1.4649	-0.000642	1.0663	0.00046731	-0.39859	-0.00017469	438.59760737828816	106.13	0.12138	106.28	106.22	106.34	0.14843					4	2	2	0	0	0	0.17437	1	11343	11343		32.034	12.407	1	40468	+		9758	19598	6878	6886	11225	11225					0.12289316139572293
FTVHLGPRP	9	Unmodified	_FTVHLGPRP_					0	0	0		nc|ENSG00000197408|P20813-2|CYP2B6;ENSG00000197408|ENST00000324071|CYP2B6	nc|ENSG00000197408|P20813-2|CYP2B6	nc|ENSG00000197408|P20813-2|CYP2B6	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.5785522460938	2	512.290351	1022.56615	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.787	1	66.92	66.42	67.42	0.13326								0	0	0	0.36353	1	5937	5937		49.442	18.938	1				9759	8161	6879	6887	11226	11226					0.05576886262599601
FTVLLFYHLL	10	Unmodified	_FTVLLFYHLL_					0	0	0			REV__ENSG00000144820|ENST00000273352|ADGRG7	REV__ENSG00000144820|ENST00000273352|ADGRG7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5817565917969	3	422.58127	1264.72198	2.9692	0.0012547	-1.3159	-0.00055606	1.6534	0.00069868	422.58062707178027	97.728	3.629	97.776	96.312	99.941	0.048164					208	84	4	0	0	0	0.85834	1	10453	10453		22.58	0.89391	1	464700	+		9760	19913	6880	6888	11227	11227					0.10020911993365189
FTVPQAAAPG	10	Unmodified	_FTVPQAAAPG_					0	0	0		ENSG00000116016|ENST00000263734|EPAS1	ENSG00000116016|ENST00000263734|EPAS1	ENSG00000116016|ENST00000263734|EPAS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.25433349609375	2	479.753267	957.491981	-1.1794	-0.00056582	-3.1558	-0.001514	-4.3352	-0.0020798	479.7516678352157	31.194	0.81332	31.184	30.842	31.655	-0.010656					35	18	3	0	0	0	0.8608	1	1720	1720		34.173	1.3601	1	189750			9761	2893	6881	6889	11228	11228					0.011534983804153853
FTVSKRKRR	9	Unmodified	_FTVSKRKRR_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3428955078125	2	589.367456	1176.72036	-0.37584	-0.00022151	-2.7649	-0.0016296	-3.1408	-0.0018511	589.3649051975507	94.287	0.59752	94.287	93.971	94.568	0					18	13	2	0	0	0	0.20789	1	9370	9370		10.265	0	1	80701	+		9762	22878	6882	6890	11229	11229					0.13906715747975795
FTWTNYTI	8	Unmodified	_FTWTNYTI_					0	0	0			REV__chr20:47283648-47285696|23|10.26|0.34|4.93|-|2|TE_info:L1ME4a,L1ME4a_dup32971,L1,LINE,donor,+,47285696,47285892|ZMYND8,None|4	REV__chr20:47283648-47285696|23|10.26|0.34|4.93|-|2|TE_info:L1ME4a,L1ME4a_dup32971,L1,LINE,donor,+,47285696,47285892|ZMYND8,None|4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7545776367188	2	523.2531	1044.49165	-0.31778	-0.00016628	-3.3173	-0.0017358	-3.635	-0.001902	523.2512121909256	46.685	1.2657	47.157	46.856	48.121	0.47139					47	30	2	0	0	0	0.53378	1	4419	4419		74.255	2.3776	1	2250000	+		9763	15777	6883	6891	11230	11230					-0.02881921339417204
FTYEELKDI	9	Unmodified	_FTYEELKDI_					0	0	0		nc|ENSG00000118564|Q9UKA1-2|FBXL5;ENSG00000118564|ENST00000341285|FBXL5	nc|ENSG00000118564|Q9UKA1-2|FBXL5	nc|ENSG00000118564|Q9UKA1-2|FBXL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	579.2916259765625	2	579.289879	1156.56521	-0.66884	-0.00038745	1.8917	0.0010959	1.2229	0.0007084	579.2907636510863	65.005	0.5873	65.558	65.226	65.813	0.55386					32	14	3	0	0	0	0.43338	1	7086	7086		55.504	4.1688	1	419370			9764	3038	6884	6892	11231	11231					-0.00681417687587782
FTYKAQCY	8	Unmodified	_FTYKAQCY_					0	0	0			REV__ENSG00000102805|ENST00000377453|CLN5	REV__ENSG00000102805|ENST00000377453|CLN5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2344360351562	2	512.233853	1022.45315	-1.0242	-0.00052464	3.252	0.0016658	2.2278	0.0011412	512.2354118058422	58.286	0.91768	58.32	57.951	58.869	0.033905					83	29	4	0	0	0	0.93529	1	5345	5345		52.299	6.3472	1	1356000	+		9765	17360	6885	6893	11232	11232					-0.05717550245606162
FVAGLARRR	9	Unmodified	_FVAGLARRR_					0	0	0			REV__ENSG00000215910|ENST00000688073|C1orf167	REV__ENSG00000215910|ENST00000688073|C1orf167	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.322517	1044.63048	1.1506	0.00060215	-1.1451	-0.00059924	0.0055628	2.9111E-06	523.3226484149013	88.496	0.3574	88.547	88.355	88.712	0.050415					11	8	2	0	0	0	0.20789	1	9120	9120		24.203	0	1	50280	+		9766	23694	6886	6894	11233	11233					0.1099508613940543
FVAGLARRR	9	Unmodified	_FVAGLARRR_					0	0	0			REV__ENSG00000215910|ENST00000688073|C1orf167	REV__ENSG00000215910|ENST00000688073|C1orf167	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.322517	1044.63048	1.1667	0.00061057	3.1738	0.0016609	4.3405	0.0022715	523.3250340299795	88.808	0.46005	88.858	88.551	89.011	0.050407					15	10	2	0	0	0	0.20789	1	9120	9120		24.203	0	1	100170	+		9767	23694	6886	6894	11234	11234					0.1099508613940543
FVAGLARRR	9	Unmodified	_FVAGLARRR_					0	0	0			REV__ENSG00000215910|ENST00000688073|C1orf167	REV__ENSG00000215910|ENST00000688073|C1orf167	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3036499023438	2	523.322517	1044.63048	1.0267	0.00053729	-1.057	-0.00055314	-0.030292	-1.5852E-05	523.3223523076803	87.926	0.68966	88.375	88.143	88.833	0.44893					19	16	2	0	0	0	0.20789	1	10393	10393		31.955	1.4512	1	111180	+		9768	23694	6886	6894	11235	11235					0.1099508613940543
FVAIDLATQ	9	Unmodified	_FVAIDLATQ_					0	0	0			REV__nc|ENSG00000112874|Q9BQG2-2|NUDT12	REV__nc|ENSG00000112874|Q9BQG2-2|NUDT12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.2632141113281	2	489.26875	976.522947	-1.2028	-0.00058851	-1.682	-0.00082293	-2.8848	-0.0014114	489.26775815572165	40.707	0.50734	40.666	40.383	40.891	-0.04081					25	13	2	0	0	0	0.69624	1	3019	3019		40.778	5.1599	1	315910	+		9769	17969	6887	6895	11236	11236					0.03374651694673503
FVAIGEFIY	9	Unmodified	_FVAIGEFIY_					0	0	0		nc|ENSG00000171189|P39086-2|GRIK1;nc|ENSG00000171189|P39086|GRIK1;ENSG00000171189|ENST00000327783|GRIK1	nc|ENSG00000171189|P39086-2|GRIK1	nc|ENSG00000171189|P39086-2|GRIK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.7787475585938	2	529.781493	1057.54843	-0.036677	-1.9431E-05	-3.8251	-0.0020265	-3.8618	-0.0020459	529.7793029461789	64.6	1.1094	64.603	64.064	65.173	0.0021362					72	32	4	0	0	0	0.69914	1	6034	6034		40.573	1.7665	1	265940			9770	6643	6888	6896	11237	11237					0.021961262171089402
FVALHDAR	8	Unmodified	_FVALHDAR_					0	0	0			REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.75360107421875	2	464.753601	927.49265	0.27332	0.00012703	3.01	0.0013989	3.2833	0.0015259	464.7533968647431	29.725	0.70651	29.756	29.36	30.066	0.030947					30	19	2	0	0	0	0.85277	1	1487	1487		25.45	2.4077	1	44086	+		9771	17948	6889	6897	11238	11238					0.026003378201380656
FVALHDAR	8	Unmodified	_FVALHDAR_					0	0	0			REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	464.753601	927.49265	0.27332	0.00012703	3.01	0.0013989	3.2833	0.0015259	464.7533968647431	29.725	0.70651	29.756	29.36	30.066	0.030947	0.051446	0.0029742	NaN	25.45	30	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44086	+		9772	17948	6889	6897							0.026003378201380656
FVALSPQFVYL	11	Unmodified	_FVALSPQFVYL_					0	0	0			REV__ENST00000491074.5_1_2:183605037-183619453:+|nuORF	REV__ENST00000491074.5_1_2:183605037-183619453:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.362548828125	2	642.355357	1282.69616	7.1578	0.0045978	3.3886	0.0021767	10.546	0.0067745	642.357698090965	112.58	0.75734	112.61	112.29	113.05	0.032707					52	25	4	0	0	0	0.75041	1	13627	13627		21.96	1.9631	1	69953	+		9773	16738	6890	6898	11239	11239					0.06612017751081112
FVALSPQFVYL	11	Unmodified	_FVALSPQFVYL_					0	0	0			REV__ENST00000491074.5_1_2:183605037-183619453:+|nuORF	REV__ENST00000491074.5_1_2:183605037-183619453:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3582153320312	2	642.355357	1282.69616	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.73	1	115.71	115.21	116.21	-0.016441								0	0	0	0.56276	1	13911	13911		21.96	1.9631	1		+		9774	16738	6890	6898	11240	11240					0.06612017751081112
FVAPATPVR	9	Unmodified	_FVAPATPVR_					0	0	0			REV__ENST00000343916.7_1_20:61461923-61467875:+|nuORF	REV__ENST00000343916.7_1_20:61461923-61467875:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2777099609375	2	479.279452	956.544351	-0.098244	-4.7086E-05	-4.1769	-0.0020019	-4.2751	-0.002049	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.62081	3	8718	8379;8415;8718		45.952	5.2906	1	6799600	+		9775	25296	6891	6899	11241;11242;11243	11243					0.0643408151404401
FVAPAWRRGLL	11	Unmodified	_FVAPAWRRGLL_					0	0	0			REV__ENST00000307808.10_1_4:87928163-87928310:+|nuORF	REV__ENST00000307808.10_1_4:87928163-87928310:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4059448242188	2	643.380032	1284.74551	0.02415	1.5538E-05	1.2209	0.00078551	1.2451	0.00080104	643.3797911890945	105.93	0.25079	105.93	105.72	105.97	0					8	5	2	0	0	0	0.17289	1	10958	10958		29.15	3.5755	1	31740	+		9776	24853	6892	6900	11244	11244					0.11452770550567948
FVCCVFLF	8	Unmodified	_FVCCVFLF_					0	0	0			REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.2366638183594	2	489.23481	976.455067	-0.22761	-0.00011136	3.5332	0.0017286	3.3056	0.0016172	489.2364963124142	86.068	2.1429	86.511	85.703	87.846	0.44331					118	51	4	0	0	0	0.88393	1	10053	10053		33.493	4.3434	1	3099300	+		9777	26054	6893	6901	11245	11245					-0.034102127613437005
FVCCVFLF	8	Unmodified	_FVCCVFLF_					0	0	0			REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.2364196777344	2	489.23481	976.455067	-0.71864	-0.00035159	3.9786	0.0019465	3.2599	0.0015949	489.2367667655941	86.159	1.8924	86.606	85.945	87.837	0.44736					116	45	5	0	0	0	0.88393	1	10103	10103		33.493	6.6969	1	3138400	+		9778	26054	6893	6901	11246	11246					-0.034102127613437005
FVCLKFII	8	Unmodified	_FVCLKFII_					0	0	0		ENSG00000136931|ENST00000373588|NR5A1	ENSG00000136931|ENST00000373588|NR5A1	ENSG00000136931|ENST00000373588|NR5A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.2969055175781	2	491.793349	981.572146	0.44365	0.00021818	3.2956	0.0016208	3.7392	0.0018389	491.7950876173739	61.702	0.68761	61.821	61.679	62.366	0.11901					43	29	2	0	0	0	0.82464	1	5388	5388		21.702	3.3779	1	220410			9779	4159	6894	6902	11247	11247					0.08062268449907606
FVCQEEEY	8	Unmodified	_FVCQEEEY_					0	0	0			REV__ENSG00000259823|ENST00000590317|LYPD8	REV__ENSG00000259823|ENST00000590317|LYPD8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.7119140625	2	523.710408	1045.40626	0.12378	6.4825E-05	3.4714	0.001818	3.5952	0.0018828	523.7120894917373	23.85	0.6565	23.798	23.553	24.209	-0.052114					29	15	3	0	0	0	0.92457	1	875	875		47.916	12.715	1	91559	+		9780	23933	6895	6903	11248	11248					-0.11462454587399407
FVCVILLKCI	10	Unmodified	_FVCVILLKCI_					0	0	0		ENST00000564999.5_1_18:53254319-53255766:-|nuORF	ENST00000564999.5_1_18:53254319-53255766:-|nuORF	ENST00000564999.5_1_18:53254319-53255766:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3260498046875	2	575.839974	1149.66539	3.0203	0.0017392	1.6722	0.00096294	4.6925	0.0027021	575.840979589669	114.02	0.25061	114	113.93	114.18	-0.024452					8	6	2	0	0	0	0.37624	1	12635	12635		23.042	7.4007	1	49249			9781	13902	6896	6904	11249	11249					0.09654824840845322
FVCWRKIKQS	10	Unmodified	_FVCWRKIKQS_					0	0	0		ENST00000557951.1_1_15:73996325-74000993:+|nuORF;nc|ENSG00000103855|Q5ZPR3-2|CD276;nc|ENSG00000103855|Q5ZPR3-4|CD276;ENSG00000103855|ENST00000318443|CD276	ENST00000557951.1_1_15:73996325-74000993:+|nuORF	ENST00000557951.1_1_15:73996325-74000993:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.2415771484375	3	432.241142	1293.7016	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.945	1	40.899	40.399	41.399	-0.045467								0	0	0	0.45132	1	2634	2634		32.751	1.1163	1				9782	2102	6897	6905	11250	11250					0.06649418061920187
FVDCRKPGLQ	10	Unmodified	_FVDCRKPGLQ_					0	0	0		nc|ENSG00000167716|Q562E7-4|WDR81;ENSG00000167716|ENST00000409644|WDR81;ENST00000464528.5_1_17:1630890-1639119:+|nuORF;nc|ENSG00000167716|Q562E7-2|WDR81;nc|ENSG00000167716|Q562E7-6|WDR81;nc|ENSG00000167716|Q562E7-5|WDR81;nc|ENSG00000167716|Q562E7-3|WDR81	nc|ENSG00000167716|Q562E7-4|WDR81	nc|ENSG00000167716|Q562E7-4|WDR81	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	581.8028564453125	2	581.805508	1161.59646	-0.52283	-0.00030418	-2.2215	-0.0012925	-2.7443	-0.0015967	581.8040900175316	64.716	0.90666	64.754	64.351	65.257	0.037857					89	29	4	0	0	0	0.42393	1	5750	5750		62.107	1.9892	1	1330600			9783	6321	6898	6906	11251	11251					0.022128768654965825
FVDELTQTF	9	Unmodified	_FVDELTQTF_					0	0	0			REV__ENSG00000159197|ENST00000290310|KCNE2	REV__ENSG00000159197|ENST00000290310|KCNE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.268798828125	2	550.268947	1098.52334	-0.17346	-9.5449E-05	0.080005	4.4024E-05	-0.093453	-5.1424E-05	550.2690081664308	78.916	0.76439	79.465	79.149	79.914	0.54945					33	17	3	0	0	0	0.096131	1	9059	9059		93.195	25.702	1	803690	+		9784	20643	6899	6907	11252	11252					-0.0219797337615546
FVDELTQTF	9	Unmodified	_FVDELTQTF_					0	0	0			REV__ENSG00000159197|ENST00000290310|KCNE2	REV__ENSG00000159197|ENST00000290310|KCNE2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	550.268947	1098.52334	-0.78025	-0.00042935	0.75209	0.00041385	-0.02816	-1.5495E-05	550.2694161299087	79.032	0.93436	79.443	79.1	80.034	0.4106	-0.011174	0.0003573	NaN	93.195	39	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	608330	+		9785	20643	6899	6907							-0.0219797337615546
FVDFTAANI	9	Unmodified	_FVDFTAANI_					0	0	0		ENST00000330871.3_1_17:76355142-76356149:-|nuORF	ENST00000330871.3_1_17:76355142-76356149:-|nuORF	ENST00000330871.3_1_17:76355142-76356149:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.2508239746094	2	499.2531	996.491647	-0.38514	-0.00019228	-3.933	-0.0019636	-4.3181	-0.0021558	499.25094387259577	54.437	0.79847	55.022	54.749	55.548	0.58474					32	18	3	0	0	0	0.18601	1	5570	5570		76.774	4.8967	1	986120			9786	10115	6900	6908	11253	11253					-0.006739213394439503
FVEFRLKTLV	10	Unmodified	_FVEFRLKTLV_					0	0	0			REV__ENST00000496230.5_1_1:155254296-155257077:+|nuORF	REV__ENST00000496230.5_1_1:155254296-155257077:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.92218017578125	3	417.920174	1250.73869	2.409	0.0010068	2.5179	0.0010523	4.9269	0.0020591	417.9211491012133	105.29	1.9486	105.45	104.96	106.91	0.15584					170	67	4	0	0	0	0.86718	1	12880	12880		32.751	16.744	1	526200	+		9787	19829	6901	6909	11254	11254					0.12335412879338037
FVESYLTE	8	Unmodified	_FVESYLTE_					0	0	0			REV__ENST00000504087.5_1_4:125593148-125593193:-|nuORF	REV__ENST00000504087.5_1_4:125593148-125593193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.2353820800781	2	494.237116	986.459678	-0.25255	-0.00012482	-3.1685	-0.001566	-3.4211	-0.0016908	494.2355038508862	22.35	0.64511	22.291	21.969	22.614	-0.05867					32	25	2	0	0	0	0.91005	1	715	715		42.474	0	1	46843	+		9788	27850	6902	6910	11255	11255					-0.03409333813237936
FVFETPFTL	9	Unmodified	_FVFETPFTL_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.2874145507812	2	550.786776	1099.559	1.1012	0.00060653	-0.98696	-0.0005436	0.11426	6.2932E-05	550.7859963260261	103.55	0.98425	103.78	103.47	104.45	0.22556					32	23	2	0	0	0	0.09311	2	12600	12600;12612		94.006	20.032	1	394550			9789	4062	6903	6911	11256;11257	11256					0.013201088715504739
FVFETPFTL	9	Unmodified	_FVFETPFTL_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.7857055664062	2	550.786776	1099.559	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.62	1	103.89	103.39	104.39	0.26524								0	0	0	0.16145	1	12647	12647		71.296	3.802	1				9790	4062	6903	6911	11258	11258					0.013201088715504739
FVFETPFTL	9	Unmodified	_FVFETPFTL_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.7861938476562	2	550.786776	1099.559	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.7	1	103.97	103.47	104.47	0.26524								0	0	0	0.1283	1	12658	12658		73.975	24.533	1				9791	4062	6903	6911	11259	11259					0.013201088715504739
FVFETPFTL	9	Unmodified	_FVFETPFTL_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.78564453125	2	550.786776	1099.559	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.8	1	104.06	103.56	104.56	0.26524								0	0	0	0.39224	1	12671	12671		53.351	0.41475	1				9792	4062	6903	6911	11260	11260					0.013201088715504739
FVFLFSVV	8	Unmodified	_FVFLFSVV_					0	0	0		nc|ENSG00000171105|P06213-2|INSR;ENSG00000171105|ENST00000302850|INSR	nc|ENSG00000171105|P06213-2|INSR	nc|ENSG00000171105|P06213-2|INSR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27734375	2	479.275847	956.537141	-0.77651	-0.00037216	3.9721	0.0019037	3.1955	0.0015315	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.87276	1	8929	8929		29.842	0.69198	1	7040000			9793	6639	6904	6912	11261	11261					0.057133489136276694
FVFLIFHAM	9	Unmodified	_FVFLIFHAM_					0	0	0			REV__ENSG00000176920|ENST00000425340|FUT2	REV__ENSG00000176920|ENST00000425340|FUT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.8057250976562	2	562.801706	1123.58886	-0.59125	-0.00033276	-2.0004	-0.0011259	-2.5917	-0.0014586	562.8011013300355	58.362	0.62646	58.754	58.44	59.066	0.39209					31	14	3	0	0	0	0.20789	1	6079	6079		14.664	1.7049	1	340650	+		9794	22157	6905	6913	11262	11262					0.0320076933587643
FVFLIFSA	8	Unmodified	_FVFLIFSA_					0	0	0			REV__ENST00000491240.5_1_X:48433911-48434199:+|nuORF	REV__ENST00000491240.5_1_X:48433911-48434199:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28759765625	2	472.268022	942.521491	-0.018189	-8.59E-06	2.3206	0.0010959	2.3024	0.0010873	472.2686652595243	95.482	0.76691	95.529	95.371	96.138	0.046982					26	17	2	0	0	0	0.4196	1	10114	10114		28.254	0	1	95811	+		9795	27653	6906	6914	11263	11263					0.047930623965839914
FVFLQDDVY	9	Unmodified	_FVFLQDDVY_					0	0	0			REV__nc|ENSG00000010704|Q30201-9|HFE	REV__nc|ENSG00000010704|Q30201-9|HFE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.7808227539062	2	573.279315	1144.54408	0.64457	0.00036952	-0.64542	-0.00037	-0.00084801	-4.8615E-07	573.2788178941732	80.647	1.4478	80.703	80.315	81.763	0.055916					92	33	5	0	0	0	0.44421	1	8082	8082		54.776	5.3348	1	1928300	+		9796	16171	6907	6915	11264	11264					-0.022413829964762044
FVFLSRNV	8	Unmodified	_FVFLSRNV_					0	0	0			REV__nc|ENSG00000148408|Q00975-2|CACNA1B	REV__nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.293701171875	2	491.279452	980.544351	-1.4163	-0.00069578	-3.2197	-0.0015817	-4.6359	-0.0022775	491.27821223945494	81.753	0.72147	81.867	81.198	81.92	0.11426					21	16	2	0	0	0	0.4196	1	7749	7749		24.203	7.7296	1	59207	+		9797	20117	6908	6916	11265	11265					0.05330081514057383
FVFSRVALLLT	11	Unmodified	_FVFSRVALLLT_					0	0	0			REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5928039550781	3	422.592058	1264.75434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.561	1	55.534	55.034	56.034	-0.027279								0	0	0	0.56276	1	5064	5064		21.032	2.5012	1		+		9798	16350	6909	6917	11266	11266					0.13255699396381715
FVFSRVALLLT	11	Unmodified	_FVFSRVALLLT_					0	0	0			REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2265625	3	422.592058	1264.75434	-1.7991	-0.00076027	2.6553	0.0011221	0.85628	0.00036186	422.92740797039704	62.062	0.34688	62.17	61.914	62.261	0.10743					19	14	2	0	0	0	0.17729	1	5384	5384		12.957	6.6366	1	81711	+		9799	16350	6909	6917	11267	11267					0.13255699396381715
FVGGSVRQP	9	Unmodified	_FVGGSVRQP_					0	0	0			REV__nc|ENSG00000175143|O43869|OR2T1	REV__nc|ENSG00000175143|O43869|OR2T1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.76123046875	2	473.758884	945.503215	-0.29202	-0.00013835	0.94987	0.00045001	0.65785	0.00031166	473.75965181424857	23.116	0.65585	23.064	22.831	23.487	-0.052114					37	21	2	0	0	0	0.77696	1	791	791		31.53	4.8369	1	26412	+		9800	30047	6910	6918	11268	11268					0.028283204745775947
FVGGSVRQP	9	Unmodified	_FVGGSVRQP_					0	0	0			REV__nc|ENSG00000175143|O43869|OR2T1	REV__nc|ENSG00000175143|O43869|OR2T1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	473.758884	945.503215	-0.44543	-0.00021103	2.1695	0.0010278	1.7241	0.00081681	473.7598056559968	23.179	0.53206	23.129	22.905	23.437	-0.050076	0.096239	0.0010556	NaN	31.53	25	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22666	+		9801	30047	6910	6918							0.028283204745775947
FVGRKGGPVFG	11	Unmodified	_FVGRKGGPVFG_					0	0	0		ENSG00000085998|ENST00000371984|POMGNT1;nc|ENSG00000085998|Q8WZA1-2|POMGNT1	ENSG00000085998|ENST00000371984|POMGNT1	ENSG00000085998|ENST00000371984|POMGNT1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3403930664062	2	560.816733	1119.61891	1.7729	0.00099426	3.6271	0.0020342	5.4	0.0030284	560.81870987806	90.547	2.8767	90.477	88.556	91.433	-0.069977					159	68	3	0	0	0	0.17529	1	9344	9344		19.997	0	1	363300			9802	1548	6911	6919	11269	11269					0.06388844325419996
FVGRKGGPVFG	11	Unmodified	_FVGRKGGPVFG_					0	0	0		ENSG00000085998|ENST00000371984|POMGNT1;nc|ENSG00000085998|Q8WZA1-2|POMGNT1	ENSG00000085998|ENST00000371984|POMGNT1	ENSG00000085998|ENST00000371984|POMGNT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3408203125	2	560.816733	1119.61891	1.4034	0.00078706	4.3202	0.0024228	5.7236	0.0032099	560.8190854642886	89.626	0.94195	90.076	89.242	90.184	0.45058					36	22	2	0	0	0	0.17289	1	10541	10541		29.15	3.6994	1	190270			9803	1548	6911	6919	11270	11270					0.06388844325419996
FVGRLPVVVPL	11	Unmodified	_FVGRLPVVVPL_					0	0	0		ENSG00000166855|ENST00000300107|CLPX;ENST00000560166.1_1_15:65447071-65448095:-|nuORF	ENSG00000166855|ENST00000300107|CLPX	ENSG00000166855|ENST00000300107|CLPX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.3802490234375	2	598.381709	1194.74886	-2.4045	-0.0014388	1.9021	0.0011382	-0.50239	-0.00030062	598.3827122218626	40.848	1.3552	40.855	40.235	41.59	0.0065727					86	35	3	0	0	0	0.68378	1	3016	3016		34.173	9.6534	1	583190			9804	6236	6912	6920	11271	11271					0.15928020604565063
FVGRLPVVVPL	11	Unmodified	_FVGRLPVVVPL_					0	0	0		ENSG00000166855|ENST00000300107|CLPX;ENST00000560166.1_1_15:65447071-65448095:-|nuORF	ENSG00000166855|ENST00000300107|CLPX	ENSG00000166855|ENST00000300107|CLPX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3826293945312	2	598.381709	1194.74886	-1.8933	-0.0011329	1.3757	0.00082318	-0.51763	-0.00030974	598.3824540468978	41.216	0.8363	41.608	41.379	42.215	0.39209					63	22	3	0	0	0	0.67493	1	3645	3645		35.618	11.416	1	3237100			9805	6236	6912	6920	11272	11272					0.15928020604565063
FVGSHFSG	8	Unmodified	_FVGSHFSG_					0	0	0			REV__ENST00000336838.10_1_2:55646247-55646439:-|nuORF	REV__ENST00000336838.10_1_2:55646247-55646439:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.1993408203125	2	419.198128	836.381703	0.15564	6.5242E-05	-0.21908	-9.1837E-05	-0.063443	-2.6595E-05	419.19803884260574	30.494	0.45147	30.491	30.31	30.761	-0.0022526					38	22	2	0	0	0	0.92176	1	1348	1348		46.766	9.738	1	71917	+		9806	25197	6913	6921	11273	11273					-0.04303301887944144
FVGVGLYMM	9	Unmodified	_FVGVGLYMM_					0	0	0			REV__ENSG00000172150|ENST00000381951|OR1A2	REV__ENSG00000172150|ENST00000381951|OR1A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.3056335449219	2	508.750824	1015.4871	0.6238	0.00031736	3.4921	0.0017766	4.1159	0.002094	508.7521809370745	17.642	0.20172	17.16	17.077	17.279	-0.48256					7	4	2	0	0	0	0.20789	1	281	281		29.842	5.3375	1	18843	+		9807	21805	6914	6922	11274	11274					-0.02002845078197879
FVHAGEEPS	9	Unmodified	_FVHAGEEPS_					0	0	0		ENST00000581519.5_3_17:73455820-73467945:+|nuORF	ENST00000581519.5_3_17:73455820-73467945:+|nuORF	ENST00000581519.5_3_17:73455820-73467945:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.7608337402344	2	486.724707	971.43486	-0.7722	-0.00037585	1.077	0.00052421	0.30482	0.00014836	486.7250468759336	38.816	0.67755	39.158	38.896	39.574	0.34187					23	15	2	0	0	0	0.20789	1	3225	3225		11.511	0	1	137660			9808	14106	6915	6923	11275	11275					-0.05199968895942675
FVHRPRPP	8	Unmodified	_FVHRPRPP_					0	0	0			REV__nc|ENSG00000142192|P05067-10|APP	REV__nc|ENSG00000142192|P05067-10|APP	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	503.1065979003906	2	503.290685	1004.56682	-0.70054	-0.00035258	2.7609	0.0013895	2.0604	0.001037	503.29207655611583	109.44	0.95881	109.44	109.26	110.22	0					79	46	2	0	0	0	0.4196	1	11408	11408		26.796	8.4717	1	1067800	+		9809	19728	6916	6924	11276	11276					0.06471725702317599
FVHRPRPP	8	Unmodified	_FVHRPRPP_					0	0	0			REV__nc|ENSG00000142192|P05067-10|APP	REV__nc|ENSG00000142192|P05067-10|APP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	503.290685	1004.56682	2.8925	0.0014558	-1.214	-0.00061102	1.6785	0.00084477	503.29010609641796	109.73	0.92686	109.7	109.46	110.39	-0.027641	0.021919	-0.0025588	NaN	26.796	72	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	574640	+		9810	19728	6916	6924							0.06471725702317599
FVHRPRPP	8	Unmodified	_FVHRPRPP_					0	0	0			REV__nc|ENSG00000142192|P05067-10|APP	REV__nc|ENSG00000142192|P05067-10|APP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	503.290685	1004.56682	5.8559	0.0029472	-4.3326	-0.0021806	1.5233	0.00076668	503.28842124348597	109.61	0.38567	109.68	109.47	109.86	0.068001	-0.0021023	-0.0056979	NaN	26.796	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	947710	+		9811	19728	6916	6924							0.06471725702317599
FVIDLQTRL	9	Unmodified	_FVIDLQTRL_					0	0	0		ENST00000492779.5_1_20:34292405-34320086:-|nuORF;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;nc|ENSG00000131051|Q14498-3|RBM39;ENSG00000131051|ENST00000253363|RBM39;ENST00000471635.5_1_20:34297104-34301010:-|nuORF	ENST00000492779.5_1_20:34292405-34320086:-|nuORF	ENST00000492779.5_1_20:34292405-34320086:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.8230590820312	2	552.824224	1103.63389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.095	1	75.488	74.988	75.988	0.39317								0	0	0	0.11508	1	8483	8483		75.043	5.4157	1				9812	3712	6917	6925	11277	11277					0.08622291402753035
FVIETARQL	9	Unmodified	_FVIETARQL_					0	0	0		nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;ENSG00000168264|ENST00000366609|IRF2BP2;ENSG00000119669|ENST00000238647|IRF2BPL	nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;ENSG00000119669|ENST00000238647|IRF2BPL	ENSG00000119669|ENST00000238647|IRF2BPL	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8065185546875	2	538.808574	1075.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.728	1	56.129	55.629	56.629	0.40101								0	0	0	0.040188	1	5726	5726		93.143	27.678	1				9813	6385;3083	6918	6926	11278	11278					0.06781718368665679
FVIETARQL	9	Unmodified	_FVIETARQL_					0	0	0		nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;ENSG00000168264|ENST00000366609|IRF2BP2;ENSG00000119669|ENST00000238647|IRF2BPL	nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;ENSG00000119669|ENST00000238647|IRF2BPL	ENSG00000119669|ENST00000238647|IRF2BPL	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8073120117188	2	538.808574	1075.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.782	1	56.183	55.683	56.683	0.40101								0	0	0	1.1552E-28	1	5734	5734		153.04	44.948	1				9814	6385;3083	6918	6926	11279	11279					0.06781718368665679
FVIETARQL	9	Unmodified	_FVIETARQL_					0	0	0		nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;ENSG00000168264|ENST00000366609|IRF2BP2;ENSG00000119669|ENST00000238647|IRF2BPL	nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;ENSG00000119669|ENST00000238647|IRF2BPL	ENSG00000119669|ENST00000238647|IRF2BPL	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8082275390625	2	538.808574	1075.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.865	1	56.266	55.766	56.766	0.40101								0	0	0	1.0325E-39	1	5746	5746		162.25	57.506	1				9815	6385;3083	6918	6926	11280	11280					0.06781718368665679
FVIETARQL	9	Unmodified	_FVIETARQL_					0	0	0		nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;ENSG00000168264|ENST00000366609|IRF2BP2;ENSG00000119669|ENST00000238647|IRF2BPL	nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;ENSG00000119669|ENST00000238647|IRF2BPL	ENSG00000119669|ENST00000238647|IRF2BPL	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8094482421875	2	538.808574	1075.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.946	1	56.347	55.847	56.847	0.40101								0	0	0	3.8214E-40	1	5758	5758		166.68	47.935	1				9816	6385;3083	6918	6926	11281	11281					0.06781718368665679
FVIETARQL	9	Unmodified	_FVIETARQL_					0	0	0		nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;ENSG00000168264|ENST00000366609|IRF2BP2;ENSG00000119669|ENST00000238647|IRF2BPL	nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2;ENSG00000119669|ENST00000238647|IRF2BPL	ENSG00000119669|ENST00000238647|IRF2BPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8075561523438	2	538.808574	1075.60259	-0.059138	-3.1864E-05	0.37291	0.00020093	0.31377	0.00016906	538.8085752192482	55.761	1.0241	56.321	55.941	56.965	0.55954					64	25	4	0	0	0	1.2735E-13	3	5736	5728;5736;5748		171.53	52.789	1	5330100			9817	6385;3083	6918	6926	11282;11283;11284	11283					0.06781718368665679
FVIFIHII	8	Unmodified	_FVIFIHII_					0	0	0			REV__ENSG00000169403|ENST00000373857|PTAFR	REV__ENSG00000169403|ENST00000373857|PTAFR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2902526855469	2	501.312764	1000.61097	-0.50578	-0.00025355	-3.0635	-0.0015358	-3.5693	-0.0017893	501.31014713179235	86.125	0.58858	86.31	86.209	86.797	0.18523					22	13	2	0	0	0	0.4196	1	8512	8512		24.504	7.799	1	59056	+		9818	21577	6919	6927	11285	11285					0.11069317075941854
FVILINGV	8	Unmodified	_FVILINGV_					0	0	0			REV__ENSG00000152034|ENST00000281806|MCHR2	REV__ENSG00000152034|ENST00000281806|MCHR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7712707519531	2	437.773471	873.53239	-1.5858	-0.00069423	-3.2177	-0.0014086	-4.8035	-0.0021029	437.77200270373476	39.973	1.5307	39.98	39.296	40.827	0.0065002					71	45	3	0	0	0	0.88915	1	2505	2505		35.201	5.3592	1	3015800	+		9819	20281	6920	6928	11286	11286					0.0905646477085611
FVIRSASKL	9	Unmodified	_FVIRSASKL_					0	0	0			REV__ENSG00000132386|ENST00000254722|SERPINF1	REV__ENSG00000132386|ENST00000254722|SERPINF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8138122558594	2	510.813659	1019.61277	0.48537	0.00024793	-1.9972	-0.0010202	-1.5119	-0.00077229	510.81242257144913	78.865	0.80582	79.418	79.068	79.874	0.55246					44	18	3	0	0	0	0.76255	1	9061	9061		35.618	0	1	751780	+	+	9820	19000	6921	6929	11287	11287					0.10374326093892705
FVIVAVNLI	9	Unmodified	_FVIVAVNLI_					0	0	0		ENSG00000153294|ENST00000283303|ADGRF4	ENSG00000153294|ENST00000283303|ADGRF4	ENSG00000153294|ENST00000283303|ADGRF4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3008117675781	2	494.315503	986.616454	-1.6335	-0.00080746	2.7545	0.0013616	1.121	0.00055412	494.3160505464764	97.614	0.47644	97.816	97.685	98.161	0.20207					14	10	2	0	0	0	0.20789	1	10082	10082		12.207	0	1	72970			9821	5230	6922	6930	11288	11288					0.12260995867757174
FVIVFEHVVF	10	Unmodified	_FVIVFEHVVF_					0	0	0		ENSG00000146205|ENST00000674324|ANO7;nc|ENSG00000146205|Q6IWH7|ANO7	ENSG00000146205|ENST00000674324|ANO7	ENSG00000146205|ENST00000674324|ANO7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.3461303710938	2	618.344792	1234.67503	-0.32375	-0.00020019	2.1713	0.0013426	1.8475	0.0011424	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.84112	1	10410	10410		37.159	2.0071	1	926440			9822	4825	6923	6931	11289	11289					0.06708052442218104
FVIVHFFKI	9	Unmodified	_FVIVHFFKI_					0	0	0			REV__ENST00000548191.1_2_12:110489060-110511384:-|nuORF	REV__ENST00000548191.1_2_12:110489060-110511384:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.3453369140625	2	575.344595	1148.67464	0.85707	0.00049311	1.0225	0.00058829	1.8796	0.0010814	575.345131550994	98.458	2.855	98.614	97.622	100.48	0.15659					162	65	5	0	0	0	0.77546	1	10196	10196		31.955	2.7848	1	2526400	+		9823	28565	6924	6932	11290	11290					0.1062467751303302
FVIVVFDLWN	10	Unmodified	_FVIVVFDLWN_					0	0	0			REV__nc|ENSG00000169432|Q15858-4|SCN9A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3800048828125	2	626.342249	1250.66995	1.3699	0.00085805	3.8203	0.0023928	5.1903	0.0032509	626.3447468524176	106.09	0.11709	106.24	106.18	106.3	0.14843					4	2	2	0	0	0	0.37624	1	11354	11354		40.778	14.085	1	47979	+		9824	15736	6925	6933	11291	11291					0.05463748579609273
FVKAACEGY	9	Unmodified	_FVKAACEGY_					0	0	0			REV__ENST00000519323.1_1_8:74964868-75011842:+|nuORF	REV__ENST00000519323.1_1_8:74964868-75011842:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.2366027832031	2	494.233853	986.453153	-0.25255	-0.00012482	3.4328	0.0016966	3.1802	0.0015718	494.2355038508862	22.35	0.64511	22.291	21.969	22.614	-0.05867					32	25	2	0	0	0	0.62081	1	710	710		45.952	1.4209	1	46843	+		9825	28079	6926	6934	11292	11292					-0.04061550245603485
FVKASKRF	8	Unmodified	_FVKASKRF_					0	0	0		ENSG00000163116|ENST00000295268|STPG2	ENSG00000163116|ENST00000295268|STPG2	ENSG00000163116|ENST00000295268|STPG2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79534912109375	2	491.795269	981.575986	-1.6029	-0.00078829	2.358	0.0011597	0.75513	0.00037137	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.8347	1	3320	3320		23.042	2.5607	1	603870			9826	5767	6927	6935	11293	11293					0.08446074267999393
FVKASKRF	8	Unmodified	_FVKASKRF_					0	0	0		ENSG00000163116|ENST00000295268|STPG2	ENSG00000163116|ENST00000295268|STPG2	ENSG00000163116|ENST00000295268|STPG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7951354980469	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.7961	1	3973	3973		17.365	0.89182	1	581270			9827	5767	6927	6935	11294	11294					0.08446074267999393
FVKASKRF	8	Unmodified	_FVKASKRF_					0	0	0		ENSG00000163116|ENST00000295268|STPG2	ENSG00000163116|ENST00000295268|STPG2	ENSG00000163116|ENST00000295268|STPG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956848144531	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.85277	1	4721	4721		25.45	1.2474	1	2075300			9828	5767	6927	6935	11295	11295					0.08446074267999393
FVKFIVPK	8	Unmodified	_FVKFIVPK_					0	0	0			REV__nc|ENSG00000196208|Q4ZG55-3|GREB1	REV__nc|ENSG00000196208|Q4ZG55-3|GREB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.7061767578125	2	489.312764	976.610974	1.0367	0.00050726	2.465	0.0012061	3.5016	0.0017134	489.31389659316704	94.878	1.5155	95.311	94.934	96.45	0.4324					63	36	3	0	0	0	0.4196	1	11438	11438		1.2052	0	1	444970	+		9829	30124	6928	6936	11296	11296					0.12173317075939849
FVKIVSDLVVV	11	Unmodified	_FVKIVSDLVVV_					0	0	0			REV__ENST00000583470.1_1_17:30439049-30439436:-|nuORF	REV__ENST00000583470.1_1_17:30439049-30439436:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.5874938964844	3	406.588313	1216.74311	-0.37107	-0.00015087	-1.2273	-0.00049901	-1.5984	-0.00064988	406.58772324462274	24.588	2.4069	24.542	24.117	26.524	-0.04598					132	57	4	0	0	0	0.74771	1	976	976		22.562	1.5294	1	381610	+		9830	29072	6929	6937	11297	11297					0.14340877302220179
FVKKEVSTIL	10	Unmodified	_FVKKEVSTIL_					0	0	0			REV__nc|ENSG00000164342|O15455-2|TLR3	REV__nc|ENSG00000164342|O15455-2|TLR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3534545898438	2	582.355357	1162.69616	0.15817	9.2113E-05	-3.4182	-0.0019906	-3.26	-0.0018985	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.82886	1	11498	11498		37.812	3.639	1	78004000	+		9831	21074	6930	6938	11298	11298					0.12132017751105195
FVKLRPDN	8	Unmodified	_FVKLRPDN_					0	0	0		ENSG00000162753|ENST00000367714|SLC9C2	ENSG00000162753|ENST00000367714|SLC9C2	ENSG00000162753|ENST00000367714|SLC9C2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7796325683594	2	494.782359	987.550165	-0.60525	-0.00029947	-3.7112	-0.0018362	-4.3164	-0.0021357	494.7803656183054	83.829	2.2213	83.994	82.644	84.865	0.1651					103	51	3	0	0	0	0.84341	1	8114	8114		24.203	3.7209	1	285340			9832	5731	6931	6939	11299	11299					0.0558918002569726
FVKLVLKKA	9	Unmodified	_FVKLVLKKA_					0	0	0			REV__ENSG00000180432|ENST00000316161|CYP8B1	REV__ENSG00000180432|ENST00000316161|CYP8B1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3034057617188	2	523.360245	1044.70594	0.7218	0.00037776	-2.3276	-0.0012182	-1.6058	-0.00084042	523.3587366664727	89.309	0.12985	89.461	89.353	89.483	0.1519					4	2	2	0	0	0	0.20789	1	8905	8905		10.866	6.8803	1	21263	+		9833	22397	6932	6940	11300	11300					0.18537250547137774
FVKPATLRCV	10	Unmodified	_FVKPATLRCV_					0	0	0		ENSG00000151690|ENST00000392328|MFSD6	ENSG00000151690|ENST00000392328|MFSD6	ENSG00000151690|ENST00000392328|MFSD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3300170898438	2	567.328619	1132.64269	0.79571	0.00045143	1.1706	0.0006641	1.9663	0.0011155	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.86718	1	9585	9585		27.882	1.1893	1	18145000			9834	5136	6933	6941	11301	11301					0.08166941767581193
FVKRGRSGLN	10	Unmodified	_FVKRGRSGLN_					0	0	0			REV__nc|ENSG00000203710|P17927|CR1	REV__nc|ENSG00000203710|P17927|CR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3297119140625	2	567.330539	1132.64652	1.492	0.00084643	-2.5283	-0.0014344	-1.0363	-0.00058793	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.80179	1	9324	9324		39.253	1.4413	1	5346500	+		9835	23437	6934	6942	11302	11302					0.08550747585695717
FVKRMYDMILL	11	Unmodified	_FVKRMYDMILL_					0	0	0		nc|ENSG00000167723|Q8NET8-3|TRPV3;ENSG00000167723|ENST00000576742|TRPV3;nc|ENSG00000167723|Q8NET8-2|TRPV3	nc|ENSG00000167723|Q8NET8-3|TRPV3	nc|ENSG00000167723|Q8NET8-3|TRPV3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.9244079589844	3	476.929576	1427.7669	-1.861	-0.00088758	-1.7619	-0.00084032	-3.623	-0.0017279	476.9284890354769	33.006	0.49501	33.006	32.798	33.293	0					32	21	2	0	0	0	0.78683	1	1672	1672		14.086	1.6532	1	53530			9836	6324	6935	6943	11303	11303					0.07012651472768994
FVKRRPFFEK	10	Unmodified	_FVKRRPFFEK_					0	0	0			REV__ENST00000305135.9_1_3:183529275-183529383:+|nuORF	REV__ENST00000305135.9_1_3:183529275-183529383:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9324951171875	3	451.931185	1352.77173	1.2214	0.000552	2.0573	0.00092974	3.2787	0.0014817	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.85441	1	10904	10904		20.837	3.004	1	1043200	+		9837	24816	6936	6944	11304	11304					0.10945039722037109
FVKVINDH	8	Unmodified	_FVKVINDH_					0	0	0			REV__ENSG00000069956|ENST00000261845|MAPK6	REV__ENSG00000069956|ENST00000261845|MAPK6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.28863525390625	2	486.269084	970.523616	-0.087883	-4.2735E-05	-4.0363	-0.0019627	-4.1242	-0.0020055	486.2670033180827	84.072	3.4245	84.139	81.823	85.248	0.066727					183	78	3	0	0	0	0.4196	1	8067	8067		19.36	7.1531	1	631500	+		9838	16589	6937	6945	11305	11305					0.037174911343640815
FVKVINDH	8	Unmodified	_FVKVINDH_					0	0	0			REV__ENSG00000069956|ENST00000261845|MAPK6	REV__ENSG00000069956|ENST00000261845|MAPK6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	486.269084	970.523616	0.75075	0.00036507	-4.7722	-0.0023206	-4.0215	-0.0019555	486.26659548775314	84.118	3.3154	84.049	81.795	85.11	-0.069313	-0.052761	-0.0010536	NaN	19.36	180	76	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	683710	+		9839	16589	6937	6945							0.037174911343640815
FVKVINDH	8	Unmodified	_FVKVINDH_					0	0	0			REV__ENSG00000069956|ENST00000261845|MAPK6	REV__ENSG00000069956|ENST00000261845|MAPK6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	486.269084	970.523616	-1.2461	-0.00060595	-2.879	-0.0014	-4.1251	-0.0020059	486.26755742717705	83.916	3.2569	83.975	81.766	85.023	0.05925	-0.12646	0.00078772	NaN	19.36	178	74	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	697070	+		9840	16589	6937	6945							0.037174911343640815
FVKVINDH	8	Unmodified	_FVKVINDH_					0	0	0			REV__ENSG00000069956|ENST00000261845|MAPK6	REV__ENSG00000069956|ENST00000261845|MAPK6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	486.269084	970.523616	-0.73105	-0.00035549	-3.4398	-0.0016727	-4.1709	-0.0020282	486.2672651533769	83.884	3.1098	84.049	82.014	85.124	0.1651	-0.052174	0.00024229	NaN	19.36	195	72	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	746410	+		9841	16589	6937	6945							0.037174911343640815
FVKVINDH	8	Unmodified	_FVKVINDH_					0	0	0			REV__ENSG00000069956|ENST00000261845|MAPK6	REV__ENSG00000069956|ENST00000261845|MAPK6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	486.269084	970.523616	0.63795	0.00031022	-4.8589	-0.0023627	-4.2209	-0.0020525	486.266622342958	83.847	3.3995	83.995	81.853	85.253	0.14793	-0.10659	-0.0011378	NaN	19.36	184	78	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	632350	+		9842	16589	6937	6945							0.037174911343640815
FVKVINDH	8	Unmodified	_FVKVINDH_					0	0	0			REV__ENSG00000069956|ENST00000261845|MAPK6	REV__ENSG00000069956|ENST00000261845|MAPK6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	486.269084	970.523616	-1.5191	-0.00073868	-2.6591	-0.0012931	-4.1782	-0.0020317	486.2676768111391	83.81	3.3653	83.948	81.856	85.221	0.13811	-0.15385	0.0010015	NaN	19.36	174	77	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	604030	+		9843	16589	6937	6945							0.037174911343640815
FVKVINDH	8	Unmodified	_FVKVINDH_					0	0	0			REV__ENSG00000069956|ENST00000261845|MAPK6	REV__ENSG00000069956|ENST00000261845|MAPK6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	486.269084	970.523616	-0.43957	-0.00021375	-3.7648	-0.0018307	-4.2043	-0.0020444	486.2672026121119	83.959	1.8013	84.394	83.581	85.382	0.43538	0.29264	-7.3734E-05	NaN	19.36	93	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	544350	+		9844	16589	6937	6945							0.037174911343640815
FVKVINDH	8	Unmodified	_FVKVINDH_					0	0	0			REV__ENSG00000069956|ENST00000261845|MAPK6	REV__ENSG00000069956|ENST00000261845|MAPK6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	486.269084	970.523616	-0.1091	-5.3053E-05	-3.831	-0.0018629	-3.9401	-0.0019159	486.26714497938957	83.821	2.866	84.277	82.613	85.479	0.45556	0.17529	-0.00013813	NaN	19.36	136	69	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	540090	+		9845	16589	6937	6945							0.037174911343640815
FVKVLIRNM	9	Unmodified	_FVKVLIRNM_					0	0	0		ENST00000558009.1_1_15:86262473-86265428:+|nuORF	ENST00000558009.1_1_15:86262473-86265428:+|nuORF	ENST00000558009.1_1_15:86262473-86265428:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8441162109375	2	560.338987	1118.66342	3.1443	0.0017619	-0.76608	-0.00042927	2.3782	0.0013326	560.3384666398667	114.11	1.1832	114.09	113.68	114.86	-0.024452					78	42	3	0	0	0	0.7932	1	12729	12729		23.042	3.6825	1	283760			9846	13783	6938	6946	11306	11306					0.10883532147249753
FVKVVKGVR	9	Unmodified	_FVKVVKGVR_					0	0	0			REV__ENST00000479659.5_1_1:1561777-1565907:+|nuORF	REV__ENST00000479659.5_1_1:1561777-1565907:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.339844	1030.66514	-0.67972	-0.00035097	2.5573	0.0013204	1.8776	0.00096945	516.3411967829583	99.801	0.5683	99.801	99.635	100.2	0					15	13	2	0	0	0	0.20789	1	10135	10135		23.042	0	1	72683	+		9847	23241	6939	6947	11307	11307					0.15102909227516648
FVKVVKGVR	9	Unmodified	_FVKVVKGVR_					0	0	0			REV__ENST00000479659.5_1_1:1561777-1565907:+|nuORF	REV__ENST00000479659.5_1_1:1561777-1565907:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3135375976562	2	516.339844	1030.66514	2.7599	0.001425	1.3895	0.00071744	4.1494	0.0021425	516.3403867677165	99.282	0.32096	99.228	99.12	99.441	-0.053734					15	7	3	0	0	0	0.20789	1	10743	10743		16.473	0	1	353750	+		9848	23241	6939	6947	11308	11308					0.15102909227516648
FVKVVKGVR	9	Unmodified	_FVKVVKGVR_					0	0	0			REV__ENST00000479659.5_1_1:1561777-1565907:+|nuORF	REV__ENST00000479659.5_1_1:1561777-1565907:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.314208984375	2	516.339844	1030.66514	-1.5618	-0.00080642	3.301	0.0017045	1.7393	0.00089804	516.3415093786714	99.113	0.61922	99.299	99.198	99.817	0.18582					24	14	2	0	0	0	0.20789	1	10249	10249		17.365	3.5896	1	401250	+		9849	23241	6939	6947	11309	11309					0.15102909227516648
FVLDTLPGF	9	Unmodified	_FVLDTLPGF_					0	0	0			REV__nc|ENSG00000077092|P10826-3|RARB	REV__nc|ENSG00000077092|P10826-3|RARB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.8175964355469	2	504.773668	1007.53278	1.3172	0.0006649	-1.4811	-0.00074763	-0.1639	-8.2735E-05	504.77295985878004	98.999	0.70154	99.361	99.056	99.757	0.36137					26	17	2	0	0	0	0.20789	1	11983	11983		12.207	0	1	408960	+		9850	15808	6940	6948	11310	11310					0.029318397000679397
FVLEVPSAY	9	Unmodified	_FVLEVPSAY_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;ENST00000509621.1_3_5:89989878-90055411:+|nuORF	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.7691650390625	2	512.771126	1023.5277	0.15603	8.0008E-05	-4.1778	-0.0021422	-4.0217	-0.0020622	512.7688154099643	38.505	0.9453	38.477	38.129	39.074	-0.027843					50	21	3	0	0	0	0.69914	1	2642	2642		40.573	0	1	477320			9851	5938	6941	6949	11311	11311					0.016875358374250027
FVLHLTATAS	10	Unmodified	_FVLHLTATAS_					0	0	0			REV__nc|ENSG00000253305|Q9Y5F9-2|PCDHGB6;REV__nc|ENSG00000253953|Q9UN71-2|PCDHGB4;REV__nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	REV__nc|ENSG00000253305|Q9Y5F9-2|PCDHGB6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2933959960938	2	530.295299	1058.57605	-1.2396	-0.00065735	-2.6354	-0.0013976	-3.875	-0.0020549	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.86452	1	10676	10676		30.504	0.18592	1	1818700	+		9852	23877;23884;23887	6942	6950	11312	11312					0.04910029477309763
FVLKDMKIR	9	Unmodified	_FVLKDMKIR_					0	0	0		nc|ENSG00000137941|Q6ZT98-3|TTLL7;ENSG00000137941|ENST00000260505|TTLL7;ENST00000477524.5_1_1:84367884-84378129:-|nuORF;ENST00000480174.5_1_1:84335647-84372167:-|nuORF;ENST00000488014.5_1_1:84352960-84383379:-|nuORF	nc|ENSG00000137941|Q6ZT98-3|TTLL7	nc|ENSG00000137941|Q6ZT98-3|TTLL7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.345458984375	2	575.344269	1148.67399	2.6142	0.0015041	-0.15558	-8.9513E-05	2.4586	0.0014146	575.3441275619858	98.676	2.5508	98.621	98.113	100.66	-0.054825					162	58	5	0	0	0	0.78528	1	10710	10710		29.17	3.596	1	4409300			9853	4246	6943	6951	11313	11313					0.10559514801661862
FVLLKLRMA	9	Unmodified	_FVLLKLRMA_					0	0	0			REV__ENST00000359152.9_1_11:85405646-85405715:-|nuORF	REV__ENST00000359152.9_1_11:85405646-85405715:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3173217773438	2	545.843905	1089.67326	-0.352	-0.00019214	-1.0507	-0.00057352	-1.4027	-0.00076566	545.8412543070183	90.897	0.31367	90.966	90.804	91.118	0.069328					10	7	2	0	0	0	0.20789	1	9352	9352		19.36	11.67	1	66391	+		9854	25450	6944	6952	11314	11314					0.13200720152622125
FVLRLPAGA	9	Unmodified	_FVLRLPAGA_					0	0	0			REV__ENSG00000139914|ENST00000267426|FITM1	REV__ENSG00000139914|ENST00000267426|FITM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28643798828125	2	472.28982	942.565087	-0.020844	-9.8445E-06	-3.031	-0.0014315	-3.0519	-0.0014414	472.2886401095811	102.22	1.1993	102.27	101.63	102.83	0.043198					45	28	2	0	0	0	0.77546	1	11058	11058		31.955	1.4512	1	302630	+		9855	19581	6945	6953	11315	11315					0.09150671893689832
FVLRPHTL	8	Unmodified	_FVLRPHTL_					0	0	0		ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79449462890625	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.115	1	60.116	59.616	60.616	0.00051117								0	0	0	0.29755	1	5190	5190		24.203	1.1603	1				9856	1027	6946	6954	11316	11316					0.08446074267999393
FVLRPLVDRLH	11	Unmodified	_FVLRPLVDRLH_					0	0	0		ENST00000344651.4_1_12:121159001-121159205:+|nuORF	ENST00000344651.4_1_12:121159001-121159205:+|nuORF	ENST00000344651.4_1_12:121159001-121159205:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6085205078125	3	455.610223	1363.80884	-0.20528	-9.3526E-05	-3.7927	-0.001728	-3.998	-0.0018215	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.74405	1	7449	7449		23.378	0.81632	1	1835000			9857	10295	6947	6955	11317	11317					0.14148711267785075
FVLRPRARPAA	11	Unmodified	_FVLRPRARPAA_					0	0	0			REV__ENSG00000179855|ENST00000644452|GIPC3	REV__ENSG00000179855|ENST00000644452|GIPC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.385009765625	2	627.383106	1252.75166	0.97949	0.00061452	-2.5587	-0.0016053	-1.5792	-0.00099076	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.72918	1	13052	13052		26.693	3.1702	1	19815000	+		9858	22359	6948	6956	11318	11318					0.13539288782089898
FVLSVHLFAM	10	Unmodified	_FVLSVHLFAM_					0	0	0			REV__ENST00000540430.5_1_11:18417952-18417997:+|nuORF	REV__ENST00000540430.5_1_11:18417952-18417997:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8681030273438	2	582.31772	1162.62089	3.1744	0.0018485	4.1231	0.002401	7.2975	0.0042495	582.3198681311023	102.34	0.77669	102.29	101.97	102.74	-0.047005					34	18	3	0	0	0	0.37624	1	11155	11155		23.042	5.8757	1	130230	+		9859	28463	6949	6957	11319	11319					0.04608137018999514
FVLSVHLFAM	10	Unmodified	_FVLSVHLFAM_					0	0	0			REV__ENST00000540430.5_1_11:18417952-18417997:+|nuORF	REV__ENST00000540430.5_1_11:18417952-18417997:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	582.31772	1162.62089	-0.29327	-0.00017078	7.4109	0.0043155	7.1176	0.0041447	582.3217629510648	102.54	0.463	102.54	102.28	102.75	0	0.19396	0.00082671	NaN	23.042	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129200	+		9860	28463	6949	6957							0.04608137018999514
FVLSVHLFAM	10	Unmodified	_FVLSVHLFAM_					0	0	0			REV__ENST00000540430.5_1_11:18417952-18417997:+|nuORF	REV__ENST00000540430.5_1_11:18417952-18417997:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	582.31772	1162.62089	-0.84675	-0.00049308	7.7467	0.004511	6.8999	0.0040179	582.3221104373143	102.47	0.77078	102.49	102.16	102.93	0.01989	0.14445	0.0012177	NaN	23.042	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113030	+		9861	28463	6949	6957							0.04608137018999514
FVLSVHLFAM	10	Unmodified	_FVLSVHLFAM_					0	0	0			REV__ENST00000540430.5_1_11:18417952-18417997:+|nuORF	REV__ENST00000540430.5_1_11:18417952-18417997:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	582.31772	1162.62089	0.88284	0.00051409	5.9371	0.0034573	6.8199	0.0039714	582.3210592930157	102.15	0.83768	102.29	101.98	102.82	0.13523	-0.055819	-0.00088976	NaN	23.042	35	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143360	+		9862	28463	6949	6957							0.04608137018999514
FVLSVHLFAM	10	Unmodified	_FVLSVHLFAM_					0	0	0			REV__ENST00000540430.5_1_11:18417952-18417997:+|nuORF	REV__ENST00000540430.5_1_11:18417952-18417997:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	582.31772	1162.62089	-1.3468	-0.00078429	8.404	0.0048938	7.0571	0.0041095	582.3221945715482	102.2	0.75409	102.34	102.06	102.81	0.13569	-0.0080833	0.0019833	NaN	23.042	35	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165900	+		9863	28463	6949	6957							0.04608137018999514
FVLTAVGT	8	Unmodified	_FVLTAVGT_					0	0	0			REV__ENST00000533637.5_1_11:59556413-59568372:+|nuORF	REV__ENST00000533637.5_1_11:59556413-59568372:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.23260498046875	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.86791	1	8336	8336		28.254	0	1	4227600	+		9864	28352	6950	6958	11320	11320					0.04283612465758324
FVLTVYMATY	10	Unmodified	_FVLTVYMATY_					0	0	0			REV__ENSG00000105520|ENST00000688289|PLPPR2	REV__ENSG00000105520|ENST00000688289|PLPPR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3665771484375	2	604.307018	1206.59948	1.0446	0.00063124	-3.7659	-0.0022757	-2.7213	-0.0016445	604.3046779280118	104.35	1.2637	104.52	104.18	105.45	0.17096					54	31	3	0	0	0	0.37624	1	11094	11094		58.782	18.724	1	460770	+		9865	17547	6951	6959	11321	11321					0.004447071996537488
FVLVNSRGKLH	11	Unmodified	_FVLVNSRGKLH_					0	0	0			REV__ENSG00000138336|ENST00000373644|TET1	REV__ENSG00000138336|ENST00000373644|TET1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.5975036621094	3	423.919056	1268.73534	0.73384	0.00031109	-1.6168	-0.00068539	-0.88295	-0.0003743	423.91842208607653	105.82	0.11652	105.92	105.83	105.95	0.099007					4	2	2	0	0	0	0.17383	1	11291	11291		11.932	0	1	24703	+		9866	19458	6952	6960	11322	11322					0.1117216282532354
FVLVPAAR	8	Unmodified	_FVLVPAAR_					0	0	0			REV__ENST00000237500.9_1_18:3262182-3273017:+|nuORF	REV__ENST00000237500.9_1_18:3262182-3273017:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7743835449219	2	436.771263	871.527973	1.76	0.0007687	3.0034	0.0013118	4.7633	0.0020805	436.7727883819092	27.072	0.66235	27.045	26.605	27.267	-0.027706					26	16	2	0	0	0	0.86791	1	1212	1212		28.254	1.4582	1	43317	+		9867	24215	6953	6961	11323	11323					0.08707000347931171
FVMETFVHL	9	Unmodified	_FVMETFVHL_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENSG00000105677|ENST00000222284|TMEM147;ENST00000593027.6_1_19:36036533-36038346:+|nuORF;ENST00000477168.6_1_19:36037622-36038346:+|nuORF	nc|ENSG00000105677|Q9BVK8-2|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.7861328125	2	561.786253	1121.55795	0.20538	0.00011538	-0.22444	-0.00012609	-0.019064	-1.071E-05	561.7860447652239	81.311	0.56615	81.732	81.47	82.036	0.4215					34	13	3	0	0	0	0.09311	2	9365	9365;9377		94.006	19.751	1	443270			9868	2241	6954	6962	11324;11325	11324					0.0020357123098619923
FVMETFVHL	9	Unmodified	_FVMETFVHL_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENSG00000105677|ENST00000222284|TMEM147;ENST00000593027.6_1_19:36036533-36038346:+|nuORF;ENST00000477168.6_1_19:36037622-36038346:+|nuORF	nc|ENSG00000105677|Q9BVK8-2|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.7860107421875	2	561.786253	1121.55795	0.29905	0.000168	-0.38961	-0.00021888	-0.090557	-5.0874E-05	561.7858431695366	81.306	0.68887	81.806	81.499	82.188	0.49967					35	16	3	0	0	0	0.080198	2	9392	9392;9403		97.473	36.501	1	543190			9869	2241	6954	6962	11326;11327	11326					0.0020357123098619923
FVMFDICL	8	Unmodified	_FVMFDICL_					0	0	0			REV__nc|ENSG00000130529|Q8TD43-2|TRPM4	REV__nc|ENSG00000130529|Q8TD43-2|TRPM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.2370910644531	2	494.23755	986.460547	-1.0025	-0.00049547	-3.1306	-0.0015473	-4.1331	-0.0020427	494.23589365393076	22.15	0.47568	22.093	21.94	22.416	-0.057203					28	20	2	0	0	0	0.92176	1	664	664		46.766	0.81448	1	44908	+		9870	18881	6955	6963	11328	11328					-0.03322533969537744
FVMGLKKPR	9	Unmodified	_FVMGLKKPR_					0	0	0		ENSG00000157856|ENST00000288710|DRC1	ENSG00000157856|ENST00000288710|DRC1	ENSG00000157856|ENST00000288710|DRC1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3270263671875	2	538.325879	1074.63721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.77	1	113.8	113.3	114.3	0.027321								0	0	0	0.33301	1	12441	12441		19.36	1.0356	1				9871	5451	6956	6964	11329	11329					0.10287262975771228
FVMPKWLG	8	Unmodified	_FVMPKWLG_					0	0	0			REV__nc|ENSG00000128596|Q96JN2-2|CCDC136	REV__nc|ENSG00000128596|Q96JN2-2|CCDC136	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.767578125	2	489.267499	976.520445	0.26522	0.00012977	0.37115	0.00018159	0.63638	0.00031136	489.26753584830016	40.805	0.54317	40.774	40.524	41.067	-0.030987					26	15	2	0	0	0	0.9159	1	2934	2934		44.531	0.41427	1	330550	+		9872	29832	6957	6965	11330	11330					0.031245247560150347
FVNARPPN	8	Unmodified	_FVNARPPN_					0	0	0			REV__nc|ENSG00000114859|P51788-2|CLCN2	REV__nc|ENSG00000114859|P51788-2|CLCN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2636413574219	2	457.745776	913.477	-1.5954	-0.00073029	-3.1171	-0.0014269	-4.7125	-0.0021571	457.7445114622736	83.139	3.0598	83.265	82.106	85.165	0.12601					124	70	2	0	0	0	0.4196	1	8148	8148		38.806	3.1879	1	97767	+		9873	18071	6958	6966	11331	11331					0.01680051303083019
FVNIKHTHTY	10	Unmodified	_FVNIKHTHTY_					0	0	0		ENST00000524747.1_1_11:31451062-31451257:+|nuORF	ENST00000524747.1_1_11:31451062-31451257:+|nuORF	ENST00000524747.1_1_11:31451062-31451257:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.5568542480469	3	420.555895	1258.64586	1.191	0.00050089	1.9631	0.00082559	3.1541	0.0013265	420.55656210836406	23.561	0.64199	22.987	22.705	23.347	-0.57415					31	14	3	0	0	0	0.86225	1	1060	1060		32.751	2.4328	1	159750			9874	13225	6959	6967	11332	11332					0.026879081459355803
FVNIKHTHTY	10	Unmodified	_FVNIKHTHTY_					0	0	0		ENST00000524747.1_1_11:31451062-31451257:+|nuORF	ENST00000524747.1_1_11:31451062-31451257:+|nuORF	ENST00000524747.1_1_11:31451062-31451257:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	420.555895	1258.64586	1.0147	0.00042676	1.9928	0.00083807	3.0075	0.0012648	420.5565618577987	23.631	0.56009	23.249	22.973	23.533	-0.38178	0.13095	1.0392E-05	NaN	32.751	29	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	151820			9875	13225	6959	6967							0.026879081459355803
FVNKSAIDISI	11	Unmodified	_FVNKSAIDISI_					0	0	0		ENSG00000155849|ENST00000310758|ELMO1	ENSG00000155849|ENST00000310758|ELMO1	ENSG00000155849|ENST00000310758|ELMO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	603.8435668945312	2	603.840071	1205.66559	2.2717	0.0013717	2.0148	0.0012166	4.2864	0.0025883	603.8413684972849	102.57	0.50162	102.8	102.41	102.91	0.2351					28	12	3	0	0	0	0.72918	1	12461	12461		26.693	5.746	1	458020			9876	5345	6960	6968	11333	11333					0.07098239366064263
FVPKKSTPK	9	Unmodified	_FVPKKSTPK_					0	0	0		ENSG00000154736|ENST00000284987|ADAMTS5	ENSG00000154736|ENST00000284987|ADAMTS5	ENSG00000154736|ENST00000284987|ADAMTS5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.31396484375	2	516.316035	1030.61752	0.089356	4.6136E-05	-4.4666	-0.0023062	-4.3772	-0.00226	516.3137718965367	32.101	1.1163	32.227	31.561	32.677	0.12643					73	25	4	0	0	0	0.76255	1	2198	2198		35.618	12.576	1	530640			9877	5292	6961	6969	11334	11334					0.10343210236646883
FVPLIKLFYTL	11	Unmodified	_FVPLIKLFYTL_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9436950683594	3	451.944209	1352.8108	-0.61036	-0.00027585	-1.3263	-0.00059943	-1.9367	-0.00087527	451.94349825987973	55.257	1.4276	55.22	54.668	56.095	-0.036823					123	46	4	0	0	0	0.69931	1	4628	4628		31.634	6.5083	1	459960			9878	8298	6962	6970	11335	11335					0.14850327233034477
FVPLLPGNR	9	Unmodified	_FVPLLPGNR_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8002624511719	2	506.800552	1011.58655	-1.5362	-0.00077856	2.1529	0.0010911	0.61671	0.00031255	506.8015777288388	44.442	2.8102	44.442	42.605	45.415	0					120	68	3	0	0	0	0.7932	1	3332	3332		24.203	1.1603	1	386210			9879	8866	6963	6971	11336	11336					0.08122056922422871
FVPRPGPLKRS	11	Unmodified	_FVPRPGPLKRS_					0	0	0		ENSG00000158553|ENST00000444565|POM121L2	ENSG00000158553|ENST00000444565|POM121L2	ENSG00000158553|ENST00000444565|POM121L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.38330078125	2	627.377489	1252.74043	6.5869	0.0041325	1.5558	0.00097609	8.1428	0.0051086	627.3783410585748	112.58	0.5701	112.61	112.27	112.84	0.032707					46	19	3	0	0	0	0.77061	1	13636	13636		17.468	3.3309	1	89780			9880	5487	6964	6972	11337	11337					0.1241646668793237
FVPSLLTSPP	10	Unmodified	_FVPSLLTSPP_					0	0	0			REV__ENST00000237455.4_1_2:86850002-86850248:-|nuORF	REV__ENST00000237455.4_1_2:86850002-86850248:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.3001708984375	2	529.30005	1056.58555	-0.42214	-0.00022344	0.24778	0.00013115	-0.17436	-9.2287E-05	529.2999611674875	58.584	1.1615	58.977	58.566	59.728	0.39209					60	27	3	0	0	0	0.74274	1	6128	6128		42.396	5.237	1	1279600	+		9881	24214	6965	6973	11338	11338					0.059517977628502194
FVPSLSLI	8	Unmodified	_FVPSLSLI_					0	0	0			REV__nc|ENSG00000169894|Q02505-4|MUC3A	REV__nc|ENSG00000169894|Q02505-4|MUC3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2630615234375	2	438.265479	874.516405	-1.8646	-0.00081717	-3.5126	-0.0015394	-5.3771	-0.0023566	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.88915	1	2852	2852		35.201	3.6218	1	3384400	+		9882	30020	6966	6974	11339	11339					0.0741275853396246
FVPSTDKFY	9	Unmodified	_FVPSTDKFY_					0	0	0			REV__ENSG00000112159|ENST00000369393|MDN1	REV__ENSG00000112159|ENST00000369393|MDN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7579956054688	2	552.274032	1102.53351	-0.37967	-0.00020968	0.48545	0.0002681	0.10578	5.8418E-05	552.2739158481568	53.475	0.46078	54.089	53.902	54.363	0.61436					16	10	2	0	0	0	0.20789	1	5403	5403		24.203	0	1	171030	+		9883	17920	6967	6975	11340	11340					-0.013653656508950007
FVPVRLEAV	9	Unmodified	_FVPVRLEAV_					0	0	0			REV__ENSG00000188542|ENST00000405954|DUSP28	REV__ENSG00000188542|ENST00000405954|DUSP28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3097534179688	2	515.30821	1028.60187	-0.67918	-0.00034999	4.0041	0.0020634	3.325	0.0017134	515.3101163931515	57.417	1.3734	57.811	57.026	58.399	0.39407					93	33	4	0	0	0	0.21969	1	6023	6023		71.877	18.526	1	3241100	+		9884	23009	6968	6976	11341	11341					0.08870923719587154
FVQKKKSKVC	10	Unmodified	_FVQKKKSKVC_					0	0	0			REV__chr1:164563311-164682310|14|12.07|0.4|4.9|+|0|PBX1,PBX1|1	REV__chr1:164563311-164682310|14|12.07|0.4|4.9|+|0|PBX1,PBX1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8560791015625	2	597.855001	1193.69545	-0.43134	-0.00025788	2.6383	0.0015773	2.207	0.0013195	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.85934	1	9988	9988		35.618	0.46626	1	6857100	+		9885	15424	6969	6977	11342	11342					0.10634899830415634
FVQLGRVL	8	Unmodified	_FVQLGRVL_					0	0	0			REV__ENSG00000116120|ENST00000281828|FARSB	REV__ENSG00000116120|ENST00000281828|FARSB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2894287109375	2	466.28982	930.565087	-0.64111	-0.00029894	0.64441	0.00030048	0.0033003	1.5389E-06	466.28999408550436	73.948	1.2575	73.992	73.721	74.978	0.043648					98	48	3	0	0	0	0.84634	1	7155	7155		60.294	0	1	991630	+		9886	18179	6970	6978	11343	11343					0.09702671893705883
FVQLGRVL	8	Unmodified	_FVQLGRVL_					0	0	0			REV__ENSG00000116120|ENST00000281828|FARSB	REV__ENSG00000116120|ENST00000281828|FARSB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2890625	2	466.28982	930.565087	-1.0457	-0.00048758	1.1245	0.00052435	0.078871	3.6777E-05	466.29021591001344	73.859	1.0735	73.986	73.713	74.787	0.1271					83	42	3	0	0	0	0.88944	1	6829	6829		57.811	7.7867	1	958110	+		9887	18179	6970	6978	11344	11344					0.09702671893705883
FVQLGRVL	8	Unmodified	_FVQLGRVL_					0	0	0			REV__ENSG00000116120|ENST00000281828|FARSB	REV__ENSG00000116120|ENST00000281828|FARSB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.2884521484375	2	466.28982	930.565087	-1.2303	-0.0005737	1.203	0.00056094	-0.027368	-1.2762E-05	466.29024869048817	74.015	1.0053	74.101	73.822	74.827	0.085907					87	43	3	0	0	0	0.90465	1	6824	6824		40.573	5.3719	1	935090	+		9888	18179	6970	6978	11345	11345					0.09702671893705883
FVQRLRGLM	9	Unmodified	_FVQRLRGLM_					0	0	0		ENST00000463923.5_1_1:53364861-53377325:-|nuORF;ENST00000488268.5_1_1:53373241-53377448:-|nuORF;ENST00000544365.5_1_1:53373489-53379588:-|nuORF;ENST00000460612.5_1_1:53372128-53387345:-|nuORF;ENST00000476477.6_1_1:53362194-53379588:-|nuORF;nc|ENSG00000121310|Q86YB7-2|ECHDC2;ENSG00000121310|ENST00000371522|ECHDC2	ENST00000463923.5_1_1:53364861-53377325:-|nuORF	ENST00000463923.5_1_1:53364861-53377325:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.3324584960938	2	560.326411	1118.63827	-1.6541	-0.00092683	0.044059	2.4687E-05	-1.61	-0.00090214	560.3263084961918	42.497	0.24457	43.194	42.97	43.215	0.69754					9	5	2	0	0	0	0.20789	1	3783	3783		23.042	1.0826	1	139340			9889	3173	6971	6979	11346	11346					0.08369477344695042
FVRALVRVC	9	Unmodified	_FVRALVRVC_					0	0	0		ENSG00000248099|ENST00000317306|INSL3;nc|ENSG00000248099|P51460-2|INSL3	ENSG00000248099|ENST00000317306|INSL3	ENSG00000248099|ENST00000317306|INSL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8171997070312	2	531.815679	1061.6168	-0.57494	-0.00030576	3.1681	0.0016848	2.5932	0.0013791	531.8173324364058	101.39	0.86312	101.39	101.04	101.9	0					47	20	3	0	0	0	0.77546	1	10326	10326		31.955	2.7848	1	388100			9890	8830	6972	6980	11347	11347					0.08846092315957321
FVRALVRVC	9	Unmodified	_FVRALVRVC_					0	0	0		ENSG00000248099|ENST00000317306|INSL3;nc|ENSG00000248099|P51460-2|INSL3	ENSG00000248099|ENST00000317306|INSL3	ENSG00000248099|ENST00000317306|INSL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8165893554688	2	531.815679	1061.6168	1.595	0.00084823	0.62521	0.0003325	2.2202	0.0011807	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.7932	1	8952	8952		25.45	0	1	1345000			9891	8830	6972	6980	11348	11348					0.08846092315957321
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.97186279296875	3	478.973384	1433.89832	-1.6535	-0.00079198	3.9148	0.0018751	2.2613	0.0010831	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.78683	1	3588	3588		14.086	3.9821	1	252010	+		9892	21801	6973	6981	11349	11349					0.19872965947138255
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9715270996094	3	478.973384	1433.89832	-1.6051	-0.0007688	3.9699	0.0019015	2.3648	0.0011327	478.9751768575692	49.706	2.3794	49.706	48.538	50.918	0					127	57	3	0	0	0	0.81021	1	3802	3802		9.2118	0.41249	1	134370	+		9893	21801	6973	6981	11350	11350					0.19872965947138255
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9745178222656	3	478.973384	1433.89832	-0.022494	-1.0774E-05	2.5633	0.0012277	2.5408	0.001217	478.9744999510038	52.877	2.746	52.874	51.525	54.271	-0.0033035					162	72	3	0	0	0	0.80813	3	4593	4574;4593;4661		9.6461	3.6451	1	150480	+		9894	21801	6973	6981	11351;11352;11353	11352					0.19872965947138255
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97442626953125	3	478.973384	1433.89832	-0.72158	-0.00034562	3.2574	0.0015602	2.5358	0.0012146	478.97494935068806	47.94	1.1198	47.915	47.673	48.793	-0.025326					45	28	2	0	0	0	0.7896	2	4005	4005;4060		13.508	5.8285	1	261310	+		9895	21801	6973	6981	11354;11355	11354					0.19872965947138255
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.30865478515625	3	478.973384	1433.89832	-0.66297	-0.00031754	3.414	0.0016352	2.751	0.0013177	478.9749259001235	50.906	1.1817	50.882	50.384	51.566	-0.02343					53	34	2	0	0	0	0.17863	1	4512	4512		14.086	1.6532	1	143310	+		9896	21801	6973	6981	11356	11356					0.19872965947138255
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9735412597656	3	478.973384	1433.89832	-1.9678	-0.00094254	3.1251	0.0014969	1.1573	0.00055432	479.30912300096907	43.377	1.5252	43.377	42.724	44.249	0.00016785					100	36	3	0	0	0	0.80593	1	3335	3335		10.104	0.8921	1	374940	+		9897	21801	6973	6981	11357	11357					0.19872965947138255
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27734375	3	478.973384	1433.89832	-0.61485	-0.0002945	3.3927	0.001625	2.7779	0.0013305	478.97467136407386	86.932	0.43185	86.987	86.696	87.128	0.055649					12	9	2	0	0	0	0.18028	1	8852	8852		6.3209	0	1	32707	+		9898	21801	6973	6981	11358	11358					0.19872965947138255
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9755859375	3	478.973384	1433.89832	-0.90815	-0.00043498	3.264	0.0015634	2.3558	0.0011284	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.72374	3	3495	3308;3342;3495		27.644	11.723	1	368580	+		9899	21801	6973	6981	11359;11360;11361	11361					0.19872965947138255
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9729309082031	3	478.973384	1433.89832	0.26149	0.00012524	1.5738	0.00075381	1.8353	0.00087905	478.9741674058618	42.954	1.6917	43.019	42.201	43.892	0.065037					93	45	3	0	0	0	0.81021	1	2996	2996		9.2118	0	1	530890	+		9900	21801	6973	6981	11362	11362					0.19872965947138255
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9749450683594	3	478.973384	1433.89832	0.29105	0.00013941	2	0.00095795	2.2911	0.0010974	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.76579	1	3368	3368		18.531	5.0231	1	395190	+		9901	21801	6973	6981	11363	11363					0.19872965947138255
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9756774902344	3	478.973384	1433.89832	0.32204	0.00015425	2.3016	0.0011024	2.6237	0.0012567	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.7896	1	3882	3882		13.508	7.1871	1	307830	+		9902	21801	6973	6981	11364	11364					0.19872965947138255
FVRFLRSLIKR	11	Unmodified	_FVRFLRSLIKR_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9729309082031	3	478.973384	1433.89832	0.26149	0.00012524	1.5738	0.00075381	1.8353	0.00087905	478.9741674058618	42.954	1.6917	43.019	42.201	43.892	0.065037					93	45	3	0	0	0	0.17911	1	2996	2996		9.2118	1.8705	1	530890	+		9903	21801	6973	6981	11365	11365					0.19872965947138255
FVRKKLKI	8	Unmodified	_FVRKKLKI_					0	0	0			REV__nc|ENSG00000167566|Q9HCH0-2|NCKAP5L	REV__nc|ENSG00000167566|Q9HCH0-2|NCKAP5L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3137817382812	2	516.358037	1030.70152	-0.2598	-0.00013415	0.77858	0.00040203	0.51878	0.00026788	516.359246635774	98.965	0.73721	99.187	99.047	99.785	0.22263					23	17	2	0	0	0	0.4196	1	10276	10276		8.8223	0	1	276200	+		9904	21396	6974	6982	11366	11366					0.18739786124228885
FVRKVYTILL	10	Unmodified	_FVRKVYTILL_					0	0	0		nc|ENSG00000135472|Q9BWQ8-2|FAIM2;ENSG00000135472|ENST00000320634|FAIM2	nc|ENSG00000135472|Q9BWQ8-2|FAIM2	nc|ENSG00000135472|Q9BWQ8-2|FAIM2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.9225158691406	3	417.932303	1250.77508	2.7172	0.0011356	-1.5231	-0.00063657	1.194	0.00049902	417.93142213656233	106.24	0.30197	106.2	106.1	106.4	-0.03714					11	6	2	0	0	0	0.37624	1	11760	11760		12.207	0	1	45669			9905	4027	6975	6983	11367	11367					0.15972289776050275
FVRLGALP	8	Unmodified	_FVRLGALP_					0	0	0			REV__ENST00000413380.5_2_7:18535349-18535451:+|nuORF	REV__ENST00000413380.5_2_7:18535349-18535451:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2756652832031	2	436.771263	871.527973	1.7437	0.00076159	3.2678	0.0014273	5.0114	0.0021889	436.7728952540282	27.595	1.1661	27.572	27.227	28.393	-0.023556					56	27	3	0	0	0	0.82464	1	1300	1300		21.702	1.2205	1	71535	+		9906	26392	6976	6984	11368	11368					0.08707000347953908
FVRNFIRY	8	Unmodified	_FVRNFIRY_					0	0	0			REV__ENST00000480174.5_1_1:84335647-84372167:-|nuORF	REV__ENST00000480174.5_1_1:84335647-84372167:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	557.8099365234375	2	557.811451	1113.60835	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.147	1	44.991	44.491	45.491	0.84438								0	0	0	0.30457	1	4048	4048		50.025	12.865	1		+		9907	19423	6977	6985	11369	11369					0.05608861670998522
FVRRGRPAS	9	Unmodified	_FVRRGRPAS_					0	0	0			REV__ENSG00000136856|ENST00000373371|SLC2A8	REV__ENSG00000136856|ENST00000373371|SLC2A8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3031616210938	2	523.304324	1044.5941	-0.041393	-2.1661E-05	-1.4838	-0.00077647	-1.5252	-0.00079813	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.74721	1	8769	8769		37.159	0	1	3850300	+		9908	19341	6978	6986	11370	11370					0.0735820924271593
FVRRGRPAS	9	Unmodified	_FVRRGRPAS_					0	0	0			REV__ENSG00000136856|ENST00000373371|SLC2A8	REV__ENSG00000136856|ENST00000373371|SLC2A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.303466796875	2	523.304324	1044.5941	-0.178	-9.3149E-05	-1.52	-0.00079542	-1.698	-0.00088857	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.7932	1	8323	8323		21.96	0	1	4158500	+		9909	19341	6978	6986	11371	11371					0.0735820924271593
FVRRGRPAS	9	Unmodified	_FVRRGRPAS_					0	0	0			REV__ENSG00000136856|ENST00000373371|SLC2A8	REV__ENSG00000136856|ENST00000373371|SLC2A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3038330078125	2	523.304324	1044.5941	-1.5391	-0.00080541	0.19239	0.00010068	-1.3467	-0.00070473	523.3043023099639	101.12	1.2429	101.28	100.84	102.08	0.15505					68	30	4	0	0	0	0.76255	1	10532	10532		35.618	11.099	1	825170	+		9910	19341	6978	6986	11372	11372					0.0735820924271593
FVRVSVLAVC	10	Unmodified	_FVRVSVLAVC_					0	0	0			REV__ENSG00000146904|ENST00000275815|EPHA1	REV__ENSG00000146904|ENST00000275815|EPHA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.8399658203125	2	546.815344	1091.61614	0.19428	0.00010624	0.32706	0.00017884	0.52134	0.00028508	546.816297232005	100.53	0.21103	100.75	100.64	100.85	0.21511					6	4	2	0	0	0	0.37624	1	10513	10513		45.952	0	1	42737	+		9911	20039	6979	6987	11373	11373					0.07399252876280116
FVSEDNMAF	9	Unmodified	_FVSEDNMAF_					0	0	0		ENSG00000186501|ENST00000374076|TMEM222	ENSG00000186501|ENST00000374076|TMEM222	ENSG00000186501|ENST00000374076|TMEM222	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.229248046875	2	530.226225	1058.4379	-0.18075	-9.5841E-05	3.9008	0.0020683	3.72	0.0019725	530.2281044813709	29.55	0.60334	29.617	29.402	30.005	0.066727					49	26	3	0	0	0	0.78058	1	1263	1263		30.504	1.3541	1	184430			9912	7800	6980	6988	11374	11374					-0.0889846183345071
FVSLFVFV	8	Unmodified	_FVSLFVFV_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.278564453125	2	479.275847	956.537141	-1.1288	-0.000541	4.4078	0.0021125	3.279	0.0015715	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.86791	1	7528	7528		28.254	1.5614	1	1311100	+		9913	21140	6981	6989	11375	11375					0.05713348913616301
FVSLFVFV	8	Unmodified	_FVSLFVFV_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27728271484375	2	479.275847	956.537141	-0.77651	-0.00037216	3.9721	0.0019037	3.1955	0.0015315	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.86791	1	8942	8942		28.254	3.7503	1	7040000	+		9914	21140	6981	6989	11376	11376					0.05713348913616301
FVSPGGLLEP	10	Unmodified	_FVSPGGLLEP_					0	0	0			REV__nc|ENSG00000211896|P01857-1|IGHG1	REV__nc|ENSG00000211896|P01857-1|IGHG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.27288818359375	2	508.276575	1014.5386	-0.35401	-0.00017994	-3.9158	-0.0019903	-4.2698	-0.0021703	508.27456407429634	31.882	0.59818	32.008	31.691	32.289	0.12642					27	13	3	0	0	0	0.84112	1	2183	2183		37.159	2.9866	1	153330	+		9915	30192	6982	6990	11377	11377					0.03190938211719185
FVSREPVF	8	Unmodified	_FVSREPVF_					0	0	0			REV__ENST00000473835.6_1_3:142775306-142775360:+|nuORF	REV__ENST00000473835.6_1_3:142775306-142775360:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.7633972167969	2	490.763635	979.512717	0.060315	2.96E-05	-0.16712	-8.2015E-05	-0.1068	-5.2415E-05	490.7634578998655	55.318	0.62597	55.887	55.531	56.157	0.56836					27	14	2	0	0	0	0.47906	1	5691	5691		76.847	0	1	660610	+		9916	27287	6983	6991	11378	11378					0.02214088760104005
FVSREPVF	8	Unmodified	_FVSREPVF_					0	0	0			REV__ENST00000473835.6_1_3:142775306-142775360:+|nuORF	REV__ENST00000473835.6_1_3:142775306-142775360:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	490.763635	979.512717	0.060315	2.96E-05	-0.16712	-8.2015E-05	-0.1068	-5.2415E-05	490.7634578998655	55.318	0.62597	55.887	55.531	56.157	0.56836	-0.046041	-0.00010338	NaN	76.847	27	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	660610	+		9917	27287	6983	6991							0.02214088760104005
FVTARVVYKK	10	Unmodified	_FVTARVVYKK_					0	0	0			REV__ENST00000468398.1_1_3:149047933-149051100:-|nuORF	REV__ENST00000468398.1_1_3:149047933-149051100:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.8723754882812	2	605.868966	1209.72338	0.90131	0.00054608	4.314	0.0026137	5.2153	0.0031598	605.871436730015	100.15	1.5268	100.3	99.851	101.38	0.15073					77	35	3	0	0	0	0.86763	1	10490	10490		26.693	3.6504	1	806450	+		9918	27182	6984	6992	11379	11379					0.12690546082126275
FVTLGITT	8	Unmodified	_FVTLGITT_					0	0	0			REV__nc|ENSG00000175164|P16442|ABO	REV__nc|ENSG00000175164|P16442|ABO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.24615478515625	2	426.247286	850.48002	-0.1821	-7.7619E-05	-2.626	-0.0011193	-2.8081	-0.0011969	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.89962	1	8838	8838		38.806	6.8513	1	3805200	+		9919	22043	6985	6993	11380	11380					0.04879881637236849
FVTPALRKVC	10	Unmodified	_FVTPALRKVC_					0	0	0		ENST00000510052.5_1_5:10227736-10249985:-|nuORF;ENST00000508553.1_1_5:10236514-10249985:-|nuORF;nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT;ENSG00000150756|ENST00000511437|ATPSCKMT	ENST00000510052.5_1_5:10227736-10249985:-|nuORF	ENST00000510052.5_1_5:10227736-10249985:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3300170898438	2	567.328619	1132.64269	1.5887	0.00090129	0.7216	0.00040939	2.3103	0.0013107	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.86471	1	9342	9342		30.318	3.5216	1	5459400			9920	5082	6986	6994	11381	11381					0.08166941767581193
FVTPALRKVC	10	Unmodified	_FVTPALRKVC_					0	0	0		ENST00000510052.5_1_5:10227736-10249985:-|nuORF;ENST00000508553.1_1_5:10236514-10249985:-|nuORF;nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT;ENSG00000150756|ENST00000511437|ATPSCKMT	ENST00000510052.5_1_5:10227736-10249985:-|nuORF	ENST00000510052.5_1_5:10227736-10249985:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.33056640625	2	567.328619	1132.64269	-1.3957	-0.00079181	3.7842	0.0021469	2.3885	0.0013551	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.84112	1	8844	8844		37.159	0.71236	1	5956400			9921	5082	6986	6994	11382	11382					0.08166941767581193
FVTSENDFL	9	Unmodified	_FVTSENDFL_					0	0	0			REV__ENSG00000171714|ENST00000324559|ANO5	REV__ENSG00000171714|ENST00000324559|ANO5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2528686523438	2	536.253297	1070.49204	-0.2688	-0.00014415	0.13075	7.0114E-05	-0.13805	-7.4031E-05	536.2532980722682	83.44	2.0793	83.895	83.438	85.517	0.45556					130	50	4	0	0	0	0.28163	1	9770	9770		66.429	15.094	1	5435300	+		9922	21760	6987	6995	11383	11383					-0.04038546410242816
FVVDLLTIR	9	Unmodified	_FVVDLLTIR_					0	0	0			REV__nc|ENSG00000172752|A8TX70-2|COL6A5	REV__nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3270263671875	2	538.329142	1074.64373	-0.15636	-8.4174E-05	-4.0212	-0.0021647	-4.1776	-0.0022489	538.3269075153179	101.16	2.8222	101.19	100.44	103.26	0.031036					310	67	7	0	0	0	0.74721	1	10933	10933		37.159	1.5408	1	74691000	+		9923	21854	6988	6996	11384	11384					0.10939479408125408
FVVFFCVGF	9	Carbamidomethyl (C)	_FVVFFC(Carbamidomethyl (C))VGF_	FVVFFC(1)VGF		FVVFFC(60)VGF		0	1	0			REV__ENST00000412082.6_1_16:20935625-20935910:+|nuORF	REV__ENST00000412082.6_1_16:20935625-20935910:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.2799072265625	2	561.278063	1120.54157	0.97335	0.00054632	1.4482	0.00081282	2.4215	0.0013591	561.2787758883688	87.737	0.9844	88.185	87.767	88.752	0.44761					61	23	4	0	0	0	0.36201	1	10312	10312		60.404	10.962	1	1224500	+		9924	26374	6989	6997	11385	11385	321				-0.013875099351253084
FVVGKVKV	8	Unmodified	_FVVGKVKV_					0	0	0			REV__nc|ENSG00000132692|Q96GW7-2|BCAN	REV__nc|ENSG00000132692|Q96GW7-2|BCAN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2633056640625	2	438.289288	874.564024	0.14946	6.5507E-05	3.5491	0.0015555	3.6986	0.001621	438.2910604833936	35.388	0.21214	35.494	35.407	35.619	0.10603					7	5	2	0	0	0	0.4196	1	1867	1867		42.474	37.388	1	36105	+		9925	19022	6990	6998	11386	11386					0.12172457524798119
FVVGKVKV	8	Unmodified	_FVVGKVKV_					0	0	0			REV__nc|ENSG00000132692|Q96GW7-2|BCAN	REV__nc|ENSG00000132692|Q96GW7-2|BCAN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2624206542969	2	438.289288	874.564024	-0.12141	-5.3211E-05	-4.2046	-0.0018428	-4.326	-0.001896	438.2874557972272	40.48	0.12904	40.432	40.328	40.457	-0.04789					8	6	2	0	0	0	0.4196	1	2556	2556		33.516	6.8227	1	80992	+		9926	19022	6990	6998	11387	11387					0.12172457524798119
FVVGKVKV	8	Unmodified	_FVVGKVKV_					0	0	0			REV__nc|ENSG00000132692|Q96GW7-2|BCAN	REV__nc|ENSG00000132692|Q96GW7-2|BCAN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	438.289288	874.564024	1.5703	0.00068823	8.5842	0.0037624	10.154	0.0044506	438.29352419698176	35.273	0.65054	35.654	35.288	35.938	0.3812	0.079922	0.0023719	NaN	42.474	28	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	204420	+		9927	19022	6990	6998							0.12172457524798119
FVVGLLDL	8	Unmodified	_FVVGLLDL_					0	0	0		nc|ENSG00000137672|Q9Y210-3|TRPC6;ENSG00000137672|ENST00000344327|TRPC6	nc|ENSG00000137672|Q9Y210-3|TRPC6	nc|ENSG00000137672|Q9Y210-3|TRPC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2629089355469	2	438.265479	874.516405	-1.5746	-0.00069011	-4.2502	-0.0018627	-5.8249	-0.0025528	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.89457	1	3105	3105		37.028	1.8278	1	22924000			9928	4222	6991	6999	11388	11388					0.0741275853396246
FVVIFITY	8	Unmodified	_FVVIFITY_					0	0	0		ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000198513|Q8WXF7-2|ATL1	ENSG00000198513|ENST00000358385|ATL1	ENSG00000198513|ENST00000358385|ATL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29052734375	2	501.288954	1000.56336	-0.06476	-3.2463E-05	3.0665	0.0015372	3.0017	0.0015047	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.87276	2	9049	9049;9144		29.842	3.1486	1	9565500			9929	8279	6992	7000	11389;11390	11389					0.06309618085083457
FVVIFITY	8	Unmodified	_FVVIFITY_					0	0	0		ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000198513|Q8WXF7-2|ATL1	ENSG00000198513|ENST00000358385|ATL1	ENSG00000198513|ENST00000358385|ATL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2900695800781	2	501.288954	1000.56336	-1.4828	-0.00074334	4.3176	0.0021644	2.8347	0.001421	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.87276	3	8122	8122;8170;8243		37.028	6.5248	1	2793500			9930	8279	6992	7000	11391;11392;11393	11391					0.06309618085083457
FVVILVRAYSA	11	Unmodified	_FVVILVRAYSA_					0	0	0			REV__ENSG00000187080|ENST00000366480|OR2AK2	REV__ENSG00000187080|ENST00000366480|OR2AK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.3713989257812	2	619.368798	1236.72304	1.9872	0.0012308	3.6389	0.0022538	5.6261	0.0034846	619.3705755303217	101.25	1.7847	101.55	101.13	102.91	0.2999					90	48	3	0	0	0	0.7144	1	12270	12270		29.17	2.4771	1	2252000	+		9931	22900	6993	7001	11394	11394					0.11415126362294359
FVVLPVII	8	Unmodified	_FVVLPVII_					0	0	0			REV__ENST00000435683.6_1_19:1042703-1043196:+|nuORF	REV__ENST00000435683.6_1_19:1042703-1043196:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2742919921875	2	450.301865	898.589176	-1.2517	-0.00056365	1.9494	0.00087781	0.69767	0.00031416	450.3028164604885	92.791	0.32684	93.016	92.79	93.117	0.22548					11	7	3	0	0	0	0.4196	1	9388	9388		5.0869	0	1	200210	+		9932	26680	6994	7002	11395	11395					0.13582512327377572
FVVLPVII	8	Unmodified	_FVVLPVII_					0	0	0			REV__ENST00000435683.6_1_19:1042703-1043196:+|nuORF	REV__ENST00000435683.6_1_19:1042703-1043196:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.27423095703125	2	450.301865	898.589176	-1.7761	-0.0007998	1.4446	0.0006505	-0.33154	-0.00014929	450.3019338960415	93.068	0.32687	93.261	93.107	93.434	0.19239					12	7	2	0	0	0	0.4196	1	9393	9393		10.185	5.0979	1	113090	+		9933	26680	6994	7002	11396	11396					0.13582512327377572
FVVSFFVL	8	Unmodified	_FVVSFFVL_					0	0	0		ENSG00000205495|ENST00000380370|OR52J3	ENSG00000205495|ENST00000380370|OR52J3	ENSG00000205495|ENST00000380370|OR52J3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.277587890625	2	479.275847	956.537141	-0.95083	-0.00045571	4.4792	0.0021468	3.5283	0.001691	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.89457	1	10187	10187		37.028	1.4102	1	6350300			9934	8530	6995	7003	11397	11397					0.05713348913616301
FVVSTFKLLP	10	Unmodified	_FVVSTFKLLP_					0	0	0		chr22:21106245-21115929|22|16.09|0.43|5.21|+|0|TE_info:L1MA6,L1MA6_dup5341,L1,LINE,donor,-,21105750,21106245|None,BCRP2|2	chr22:21106245-21115929|22|16.09|0.43|5.21|+|0|TE_info:L1MA6,L1MA6_dup5341,L1,LINE,donor,-,21105750,21106245|None,BCRP2|2	chr22:21106245-21115929|22|16.09|0.43|5.21|+|0|TE_info:L1MA6,L1MA6_dup5341,L1,LINE,donor,-,21105750,21106245|None,BCRP2|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.8488159179688	2	575.847167	1149.67978	1.0918	0.00062874	3.5495	0.002044	4.6413	0.0026727	575.8487260820142	102.59	0.30335	102.82	102.57	102.87	0.22556					17	7	3	0	0	0	0.86272	1	12457	12457		24.519	1.4767	1	522000			9935	378	6996	7004	11398	11398					0.11092936585009738
FVVTGQVPFV	10	Unmodified	_FVVTGQVPFV_					0	0	0			REV__ENSG00000164199|ENST00000405460|ADGRV1	REV__ENSG00000164199|ENST00000405460|ADGRV1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.282470703125	2	546.808042	1091.60153	-0.45823	-0.00025056	-0.37118	-0.00020297	-0.82941	-0.00045353	547.3092747771453	53.583	0.67022	54.168	53.831	54.501	0.58474					27	15	2	0	0	0	0.37624	1	5440	5440		27.882	0	1	168820	+		9936	21051	6997	7005	11399	11399					0.059395039997752974
FVVVLASV	8	Unmodified	_FVVVLASV_					0	0	0		ENSG00000172938|ENST00000309106|MRGPRD	ENSG00000172938|ENST00000309106|MRGPRD	ENSG00000172938|ENST00000309106|MRGPRD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25811767578125	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.86791	1	549	549		28.254	3.7503	1	679020			9937	6806	6998	7006	11400	11400					0.08288775879520927
FVVVVSIVTFR	11	Unmodified	_FVVVVSIVTFR_					0	0	0		ENSG00000142319|ENST00000270349|SLC6A3	ENSG00000142319|ENST00000270349|SLC6A3	ENSG00000142319|ENST00000270349|SLC6A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59283447265625	3	422.592058	1264.75434	-0.62548	-0.00026432	3.0702	0.0012974	2.4447	0.0010331	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.68431	1	4902	4902		34.087	8.0231	1	1069500			9938	4557	6999	7007	11401	11401					0.13255699396381715
FVWQEASEF	9	Unmodified	_FVWQEASEF_					0	0	0		ENSG00000140548|ENST00000268154|ZNF710	ENSG00000140548|ENST00000268154|ZNF710	ENSG00000140548|ENST00000268154|ZNF710	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8389892578125	2	571.761289	1141.50803	0.095441	5.4569E-05	-3.1127	-0.0017797	-3.0172	-0.0017251	571.7590707098702	50.772	0.37222	51.212	50.958	51.331	0.43964					12	8	2	0	0	0	0.20789	1	4986	4986		47.657	8.4045	1	115510			9939	4446	7000	7008	11402	11402					-0.05706840173343153
FVWSAAIMKKA	11	Unmodified	_FVWSAAIMKKA_					0	0	0			REV__ENSG00000183150|ENST00000651487|GPR19	REV__ENSG00000183150|ENST00000651487|GPR19	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3793334960938	2	626.349551	1250.68455	-1.2037	-0.00075394	-1.5665	-0.00098115	-2.7702	-0.0017351	626.3482685089596	104.46	0.882	104.56	104.32	105.2	0.093857					37	21	2	0	0	0	0.1729	1	11115	11115		19.997	0	1	193720	+		9940	22583	7001	7009	11403	11403					0.06923497456091354
FVWVVPAL	8	Unmodified	_FVWVVPAL_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7758483886719	2	465.776014	929.537475	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.975	1	79.106	78.606	79.606	0.13086								0	0	0	0.29725	1	7470	7470		24.504	0.30126	1				9941	5684	7002	7010	11404	11404					0.06988768633470954
FVYKSSPK	8	Unmodified	_FVYKSSPK_					0	0	0			REV__ENSG00000086967|ENST00000357701|MYBPC2	REV__ENSG00000086967|ENST00000357701|MYBPC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.80633544921875	2	478.26601	954.517468	0.54927	0.0002627	-4.0166	-0.001921	-3.4673	-0.0016583	478.2650412939572	37.897	0.9231	38.211	37.746	38.669	0.31312					39	23	3	0	0	0	0.4196	1	3136	3136		18.324	5.3652	1	148230	+		9942	16916	7003	7011	11405	11405					0.0383897290286086
FVYPGNPLRH	10	Unmodified	_FVYPGNPLRH_					0	0	0		nc|ENSG00000112584|Q96EK7-2|FAM120B;ENSG00000112584|ENST00000476287|FAM120B	nc|ENSG00000112584|Q96EK7-2|FAM120B	nc|ENSG00000112584|Q96EK7-2|FAM120B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5487060546875	3	400.548852	1198.62473	0.93712	0.00037536	-0.48346	-0.00019365	0.45366	0.00018171	400.54851883071274	49.117	0.88852	49.577	49.104	49.992	0.45983					58	21	4	0	0	0	0.63899	3	4795	4759;4769;4795		47.96	10.858	1	1864700			9943	2671	7004	7012	11406;11407;11408	11408					0.033359428370886235
FVYPGNPLRH	10	Unmodified	_FVYPGNPLRH_					0	0	0		nc|ENSG00000112584|Q96EK7-2|FAM120B;ENSG00000112584|ENST00000476287|FAM120B	nc|ENSG00000112584|Q96EK7-2|FAM120B	nc|ENSG00000112584|Q96EK7-2|FAM120B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.5489196777344	3	400.548852	1198.62473	0.18534	7.4239E-05	0.21363	8.5568E-05	0.39897	0.00015981	400.54880830476657	48.962	0.84209	49.867	49.45	50.292	0.90424					56	20	3	0	0	0	0.40664	4	4772	4750;4759;4772;4785		63.534	30.783	1	1822100			9944	2671	7004	7012	11409;11410;11411;11412	11411					0.033359428370886235
FWAPVPLA	8	Unmodified	_FWAPVPLA_					0	0	0		ENST00000275767.3_1_7:134850415-134850709:+|nuORF	ENST00000275767.3_1_7:134850415-134850709:+|nuORF	ENST00000275767.3_1_7:134850415-134850709:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7563171386719	2	450.752539	899.490525	-0.14135	-6.3713E-05	3.8471	0.0017341	3.7058	0.0016704	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.88393	1	8193	8193		33.493	2.9893	1	337080			9945	9600	7005	7013	11413	11413					0.036759090823238694
FWKFARKGKK	10	Unmodified	_FWKFARKGKK_					0	0	0		ENSG00000109181|ENST00000265403|UGT2B10;nc|ENSG00000109181|P36537-2|UGT2B10;ENSG00000213759|ENST00000446444|UGT2B11;ENSG00000135226|ENST00000335568|UGT2B28	ENSG00000109181|ENST00000265403|UGT2B10	ENSG00000109181|ENST00000265403|UGT2B10	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3942260742188	2	648.3904	1294.76625	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.77	1	118.75	118.25	119.25	-0.024208								0	0	0	0.45132	1	13161	13161		10.866	0	1				9946	2454	7006	7014	11414	11414					0.13065360930204406
FWKFARKGKK	10	Unmodified	_FWKFARKGKK_					0	0	0		ENSG00000109181|ENST00000265403|UGT2B10;nc|ENSG00000109181|P36537-2|UGT2B10;ENSG00000213759|ENST00000446444|UGT2B11;ENSG00000135226|ENST00000335568|UGT2B28	ENSG00000109181|ENST00000265403|UGT2B10	ENSG00000109181|ENST00000265403|UGT2B10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3922729492188	2	648.3904	1294.76625	-1.1411	-0.00073988	4.1578	0.0026959	3.0167	0.001956	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.85466	1	12677	12677		20.947	0.95016	1	2297700			9947	2454	7006	7014	11415	11415					0.13065360930204406
FWKRILREWKK	11	Unmodified	_FWKRILREWKK_					0	0	0		ENST00000367669.7_2_1:176104215-176105655:-|nuORF	ENST00000367669.7_2_1:176104215-176105655:-|nuORF	ENST00000367669.7_2_1:176104215-176105655:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3284301757812	3	530.652422	1588.93544	2.4846	0.0013185	-0.52075	-0.00027634	1.9638	0.0010421	530.6521487823013	107.78	0.23178	107.89	107.73	107.96	0.10396					11	7	2	0	0	0	0.1838	1	13136	13136		3.2113	0.18535	1	370270			9948	10565	7007	7015	11416	11416					0.16452637492920985
FWKRILREWKK	11	Unmodified	_FWKRILREWKK_					0	0	0		ENST00000367669.7_2_1:176104215-176105655:-|nuORF	ENST00000367669.7_2_1:176104215-176105655:-|nuORF	ENST00000367669.7_2_1:176104215-176105655:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3277587890625	3	530.652422	1588.93544	4.7555	0.0025235	-2.5498	-0.001353	2.2057	0.0011705	530.6510528413403	107.73	0.22906	107.85	107.69	107.91	0.11715					15	8	2	0	0	0	0.18238	1	13176	13176		5.6988	0	1	264850			9949	10565	7007	7015	11417	11417					0.16452637492920985
FWLRHRLQWWR	11	Unmodified	_FWLRHRLQWWR_					0	0	0		ENSG00000256525|ENST00000539111|POLG2;ENST00000580893.5_1_17:62486773-62489133:-|nuORF;ENST00000585141.5_1_17:62481823-62493086:-|nuORF	ENSG00000256525|ENST00000539111|POLG2	ENSG00000256525|ENST00000539111|POLG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.980224609375	3	561.975899	1682.90587	5.9483	0.0033428	3.2283	0.0018142	9.1765	0.005157	562.3121591748314	110.32	0.50723	110.39	110.14	110.65	0.068001					34	16	3	0	0	0	0.91779	1	13398	13398		1.523	1.1516	1	446860			9950	8898	7008	7016	11418	11418					0.09173118267426617
FWNPPLAPRKG	11	Unmodified	_FWNPPLAPRKG_					0	0	0		nc|ENSG00000152894|Q15262|PTPRK;ENSG00000152894|ENST00000368226|PTPRK;nc|ENSG00000152894|Q15262-3|PTPRK;nc|ENSG00000152894|Q15262-4|PTPRK;ENST00000531050.5_1_6:128321419-128718758:-|nuORF;ENST00000524534.5_1_6:128384662-128841530:-|nuORF;ENST00000524481.5_1_6:128321419-128841710:-|nuORF	nc|ENSG00000152894|Q15262|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8623046875	2	641.85639	1281.69823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.59	1	119.61	119.11	120.11	0.026466								0	0	0	0.56276	1	13157	13157		26.693	2.4902	1				9951	5202	7009	7017	11419	11419					0.06864491279520735
FWNWKSKKRRG	11	Unmodified	_FWNWKSKKRRG_					0	0	0		ENST00000476652.2_1_9:80851502-80881584:+|nuORF	ENST00000476652.2_1_9:80851502-80881584:+|nuORF	ENST00000476652.2_1_9:80851502-80881584:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.2807922363281	3	498.280988	1491.82114	0.32624	0.00016256	3.1093	0.0015493	3.4355	0.0017119	498.28263458981064	33.289	0.68958	33.256	32.916	33.606	-0.032677					52	31	2	0	0	0	0.79224	1	1599	1599		12.957	0	1	223550			9952	12343	7010	7018	11420	11420					0.09489747730799536
FWQILIVISPP	11	Unmodified	_FWQILIVISPP_					0	0	0		ENST00000261226.8_1_12:94964130-94964496:-|nuORF	ENST00000261226.8_1_12:94964130-94964496:-|nuORF	ENST00000261226.8_1_12:94964130-94964496:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2577819824219	3	438.260308	1311.7591	-2.0264	-0.0008881	-3.9561	-0.0017338	-5.9825	-0.0026219	438.2585447663128	30.099	0.96018	30.099	29.739	30.699	0					100	33	5	0	0	0	0.66009	1	1344	1344		37.508	4.7576	1	863580			9953	9399	7011	7019	11421	11421					0.11568583539133215
FWRISSHSDLL	11	Unmodified	_FWRISSHSDLL_					0	0	0		nc|ENSG00000112319|O95677-5|EYA4;nc|ENSG00000112319|O95677-2|EYA4;nc|ENSG00000112319|O95677-4|EYA4;ENSG00000112319|ENST00000355286|EYA4	nc|ENSG00000112319|O95677-5|EYA4	nc|ENSG00000112319|O95677-5|EYA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.23870849609375	3	454.238455	1359.69353	0.11112	5.0476E-05	-0.015424	-7.0062E-06	0.095699	4.347E-05	454.2385918284536	52.474	0.84045	52.492	52.091	52.932	0.017487					43	19	3	0	0	0	0.74771	1	4593	4593		22.562	0	1	203360			9954	2656	7012	7020	11422	11422					0.028075623461518262
FWRISSHSDLL	11	Unmodified	_FWRISSHSDLL_					0	0	0		nc|ENSG00000112319|O95677-5|EYA4;nc|ENSG00000112319|O95677-2|EYA4;nc|ENSG00000112319|O95677-4|EYA4;ENSG00000112319|ENST00000355286|EYA4	nc|ENSG00000112319|O95677-5|EYA4	nc|ENSG00000112319|O95677-5|EYA4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	454.238455	1359.69353	-0.055176	-2.5063E-05	0.24508	0.00011132	0.1899	8.626E-05	454.2386511212988	52.608	0.89941	52.604	52.114	53.013	-0.0033035	0.05138	-0.00022003	NaN	22.562	39	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120110			9955	2656	7012	7020							0.028075623461518262
FWRISSHSDLL	11	Unmodified	_FWRISSHSDLL_					0	0	0		nc|ENSG00000112319|O95677-5|EYA4;nc|ENSG00000112319|O95677-2|EYA4;nc|ENSG00000112319|O95677-4|EYA4;ENSG00000112319|ENST00000355286|EYA4	nc|ENSG00000112319|O95677-5|EYA4	nc|ENSG00000112319|O95677-5|EYA4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	454.238455	1359.69353	-1.2631	-0.00057375	1.1757	0.00053404	-0.087424	-3.9711E-05	454.23908463109154	52.585	0.64584	52.626	52.219	52.864	0.040592	0.072641	0.0010481	NaN	22.562	38	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128290			9956	2656	7012	7020							0.028075623461518262
FWRISSHSDLL	11	Unmodified	_FWRISSHSDLL_					0	0	0		nc|ENSG00000112319|O95677-5|EYA4;nc|ENSG00000112319|O95677-2|EYA4;nc|ENSG00000112319|O95677-4|EYA4;ENSG00000112319|ENST00000355286|EYA4	nc|ENSG00000112319|O95677-5|EYA4	nc|ENSG00000112319|O95677-5|EYA4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	454.238455	1359.69353	-0.5063	-0.00022998	0.60331	0.00027405	0.097007	4.4064E-05	454.2388009267402	52.565	0.54045	52.49	52.264	52.804	-0.074509	-0.062705	0.00026814	NaN	22.562	32	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	131650			9957	2656	7012	7020							0.028075623461518262
FWTVRPVPRG	10	Unmodified	_FWTVRPVPRG_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.56427001953125	3	405.564614	1213.67201	-1.5366	-0.00062318	2.106	0.0008541	0.56938	0.00023092	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.85466	1	5569	5569		14.694	0	1	187890	+		9958	20437;29946	7013	7021	11423	11423					0.07372222108074311
FYCHKQQELP	10	Unmodified	_FYCHKQQELP_					0	0	0		ENST00000491783.5_1_1:186324888-186325474:-|nuORF	ENST00000491783.5_1_1:186324888-186325474:-|nuORF	ENST00000491783.5_1_1:186324888-186325474:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	646.8092651367188	2	646.808248	1291.60194	-1.1117	-0.00071906	1.1459	0.00074119	0.034207	2.2125E-05	646.8089227755572	57.448	1.4063	57.842	57.495	58.901	0.39408					94	34	5	0	0	0	0.31414	1	5943	5943		71.296	14.862	1	8615500			9959	12690	7014	7022	11424	11424					-0.03219444342698807
FYDERIVVV	9	Unmodified	_FYDERIVVV_					0	0	0		ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.3078002929688	2	570.308406	1138.60226	0.69095	0.00039406	-0.0034397	-1.9617E-06	0.68751	0.0003921	570.3076773488507	64.776	0.96075	65.33	64.852	65.813	0.55386					45	23	3	0	0	0	0.73802	1	7023	7023		37.812	5.061	1	663280			9960	1150	7015	7023	11425	11425					0.038502986487856106
FYDLWASD	8	Unmodified	_FYDLWASD_					0	0	0		ENST00000600266.1_1_19:48254228-48254369:+|nuORF;ENST00000594525.5_1_19:48248816-48255954:+|nuORF;ENST00000598681.5_1_19:48248882-48259836:+|nuORF;ENSG00000105373|ENST00000246802|NOP53	ENST00000600266.1_1_19:48254228-48254369:+|nuORF	ENST00000600266.1_1_19:48254228-48254369:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.7184753417969	2	508.721633	1015.42871	-1.0229	-0.00052037	-3.3759	-0.0017174	-4.3988	-0.0022378	508.71986291336987	33.826	0.56899	33.828	33.628	34.197	0.0026054					22	12	2	0	0	0	0.88915	1	2045	2045		35.201	1.0282	1	70102			9961	2210	7016	7024	11426	11426					-0.07838487127492044
FYEFSKLI	8	Unmodified	_FYEFSKLI_					0	0	0		nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7;ENSG00000083223|ENST00000375963|TUT7	nc|ENSG00000083223|Q5VYS8-4|TUT7	nc|ENSG00000083223|Q5VYS8-4|TUT7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.781493	1045.54843	-0.040784	-2.1362E-05	3.4432	0.0018035	3.4024	0.0017821	523.7832750158174	90.609	2.4417	90.678	88.754	91.195	0.069328					95	57	2	0	0	0	0.4196	1	9117	9117		47.916	7.343	1	148300			9962	1499	7017	7025	11427	11427					0.027481262171022536
FYEKRMAT	8	Unmodified	_FYEKRMAT_					0	0	0		ENST00000497406.2_1_12:59414000-59414099:+|nuORF;ENSG00000137154|ENST00000380394|RPS6	ENST00000497406.2_1_12:59414000-59414099:+|nuORF	ENST00000497406.2_1_12:59414000-59414099:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.7607421875	2	523.260402	1044.50625	0.5992	0.00031354	-0.89889	-0.00047035	-0.29969	-0.00015682	523.7604804784513	60.52	0.95633	60.487	59.981	60.938	-0.032513					74	26	4	0	0	0	0.89962	1	5700	5700		38.806	0	1	391710			9963	4174	7018	7026	11428	11428					-0.014221724629351229
FYEQAPSRLP	10	Unmodified	_FYEQAPSRLP_					0	0	0			REV__chr11:62559747-62566806|17|728.18|0.7|10.02|-|0|None,EEF1G|1	REV__chr11:62559747-62566806|17|728.18|0.7|10.02|-|0|None,EEF1G|1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3692016601562	2	604.308938	1206.60332	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.27	1	116.33	115.83	116.83	0.059448								0	0	0	0.45132	1	12350	12350		18.262	0.79408	1		+		9964	15498	7019	7027	11429	11429					0.008285130177227984
FYFYHGLV	8	Unmodified	_FYFYHGLV_					0	0	0		ENST00000359866.8_1_19:17430707-17431082:+|nuORF	ENST00000359866.8_1_19:17430707-17431082:+|nuORF	ENST00000359866.8_1_19:17430707-17431082:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.2598266601562	2	523.260728	1044.5069	-0.58611	-0.00030669	-0.49408	-0.00025853	-1.0802	-0.00056522	523.7610662863972	60.377	0.92597	60.408	60.027	60.953	0.0312					81	26	4	0	0	0	0.88393	1	5636	5636		33.493	5.2387	1	376950			9965	10438	7020	7028	11430	11430					-0.013570097515867019
FYGILIIPI	9	Unmodified	_FYGILIIPI_					0	0	0			REV__nc|ENSG00000114650|Q12770-2|SCAP	REV__nc|ENSG00000114650|Q12770-2|SCAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8272094726562	2	524.825704	1047.63685	-0.63596	-0.00033377	3.0614	0.0016067	2.4255	0.0012729	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.72098	1	10290	10290		39.021	0	1	15330000	+		9966	29792	7021	7029	11431	11431					0.1149416652756372
FYGPVLLLL	9	Unmodified	_FYGPVLLLL_					0	0	0			REV__ENSG00000167850|ENST00000330793|CD300C	REV__ENSG00000167850|ENST00000330793|CD300C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	517.81884765625	2	517.817879	1033.6212	0.9943	0.00051487	1.4154	0.00073294	2.4097	0.0012478	517.81845543952	93.057	1.5114	93.102	92.582	94.093	0.045448					101	35	5	0	0	0	0.78292	1	9753	9753		29.842	3.0454	1	1083300	+		9967	21431	7022	7030	11432	11432					0.10573880010520043
FYHKLLQW	8	Unmodified	_FYHKLLQW_					0	0	0		ENSG00000173769|ENST00000309765|TOPAZ1	ENSG00000173769|ENST00000309765|TOPAZ1	ENSG00000173769|ENST00000309765|TOPAZ1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3292846679688	2	567.808377	1133.6022	1.5026	0.00085317	0.074683	4.2406E-05	1.5772	0.00089557	567.8085214825797	94.409	1.3289	94.455	94.291	95.62	0.046181					55	31	2	0	0	0	0.4196	1	9959	9959		28.254	0	1	127790			9968	6885	7023	7031	11433	11433					0.04074343439469885
FYHNVRNP	8	Unmodified	_FYHNVRNP_					0	0	0			REV__ENSG00000186306|ENST00000334438|OR10T2	REV__ENSG00000186306|ENST00000334438|OR10T2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.2603759765625	2	523.761958	1045.50936	-0.042751	-2.2391E-05	-1.7097	-0.00089547	-1.7524	-0.00091786	523.7607727774529	60.587	0.95979	60.575	60.077	61.037	-0.012203					59	22	4	0	0	0	0.884	1	5616	5616		33.516	0.76505	1	308610	+		9969	22842	7024	7032	11434	11434					-0.011571612938951148
FYHVYRRQSPQ	11	Unmodified	_FYHVYRRQSPQ_					0	0	0			REV__ENSG00000079308|ENST00000682258|TNS1	REV__ENSG00000079308|ENST00000682258|TNS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3006591796875	3	494.252987	1479.73713	-1.6337	-0.00080745	-3.8117	-0.001884	-5.4454	-0.0026914	494.25065782716723	97.245	0.42015	97.447	97.096	97.516	0.20207					12	9	2	0	0	0	0.17784	1	9992	9992		17.167	11.468	1	90503	+		9970	16779	7025	7033	11435	11435					0.01645171843256321
FYIAIVLGN	9	Unmodified	_FYIAIVLGN_					0	0	0		nc|ENSG00000182652|Q8NH05|OR4Q3;ENSG00000182652|ENST00000642117|OR4Q3	nc|ENSG00000182652|Q8NH05|OR4Q3	nc|ENSG00000182652|Q8NH05|OR4Q3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.2913818359375	2	505.289485	1008.56442	2.3779	0.0012015	1.554	0.00078521	3.9319	0.0019867	505.29016362201537	97.35	2.1515	97.295	96.802	98.953	-0.055542					137	49	4	0	0	0	0.7932	1	10458	10458		20.482	3.1169	1	1240400			9971	7467	7026	7034	11436	11436					0.060478324539985806
FYIARLLF	8	Unmodified	_FYIARLLF_					0	0	0			REV__nc|ENSG00000255374|P59539|TAS2R45	REV__nc|ENSG00000255374|P59539|TAS2R45	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.8050537109375	2	521.807845	1041.60114	-1.2132	-0.00063307	-3.0352	-0.0015838	-4.2484	-0.0022168	521.8061683737074	44.151	0.56921	44.996	44.653	45.222	0.84438					25	13	2	0	0	0	0.9159	1	4052	4052		44.531	12.576	1	1137200	+		9972	30242	7027	7035	11437	11437					0.08200129070542062
FYIIILVLAL	10	Unmodified	_FYIIILVLAL_					0	0	0		ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3428344726562	2	589.383386	1176.75222	-0.63722	-0.00037557	3.4688	0.0020445	2.8316	0.0016689	589.385187406672	93.947	0.34234	93.992	93.751	94.093	0.045456					11	7	2	0	0	0	0.37624	1	9875	9875		26.796	11.931	1	56911			9973	3466	7028	7036	11438	11438					0.1709127065857956
FYILFTIFTM	10	Unmodified	_FYILFTIFTM_					0	0	0		ENSG00000206536|ENST00000383695|OR5K3	ENSG00000206536|ENST00000383695|OR5K3	ENSG00000206536|ENST00000383695|OR5K3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3704223632812	2	648.340861	1294.66717	0.15909	0.00010314	-0.77068	-0.00049967	-0.61159	-0.00039652	648.3407940860841	51.36	0.44211	51.275	51.141	51.584	-0.084538					13	10	2	0	0	0	0.37624	1	4080	4080		42.396	18.873	1	78960			9974	8560	7029	7037	11439	11439					0.031621571304185636
FYILHPKFI	9	Unmodified	_FYILHPKFI_					0	0	0		nc|ENSG00000144057|Q96JF0-2|ST6GAL2;ENSG00000144057|ENST00000409382|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3421020507812	2	589.342052	1176.66955	-0.65438	-0.00038565	2.0945	0.0012344	1.4401	0.00084872	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.7932	1	10411	10411		24.203	0.68005	1	16804000			9975	4686	7030	7038	11440	11440					0.08828373650408139
FYIPLIHFK	9	Unmodified	_FYIPLIHFK_					0	0	0		ENSG00000164893|ENST00000297524|SLC7A13	ENSG00000164893|ENST00000297524|SLC7A13	ENSG00000164893|ENST00000297524|SLC7A13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3434448242188	2	589.342052	1176.66955	-0.3676	-0.00021664	1.9005	0.00112	1.5329	0.0009034	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.77546	1	9836	9836		31.955	4.0726	1	11103000			9976	6018	7031	7039	11441	11441					0.08828373650385402
FYITVVGY	8	Unmodified	_FYITVVGY_					0	0	0		nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2;nc|ENSG00000173698|Q8IZP9-9|ADGRG2;nc|ENSG00000173698|Q8IZP9-7|ADGRG2;nc|ENSG00000173698|Q8IZP9-6|ADGRG2;nc|ENSG00000173698|Q8IZP9-3|ADGRG2;nc|ENSG00000173698|Q8IZP9-4|ADGRG2;nc|ENSG00000173698|Q8IZP9-2|ADGRG2;ENSG00000173698|ENST00000379869|ADGRG2;nc|ENSG00000173698|Q8IZP9-10|ADGRG2	nc|ENSG00000173698|Q8IZP9-8|ADGRG2	nc|ENSG00000173698|Q8IZP9-8|ADGRG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.2635498046875	2	481.255111	960.49567	-0.3902	-0.00018779	-3.2937	-0.0015851	-3.6839	-0.0017729	481.25334880037923	73.319	0.78708	73.706	73.332	74.119	0.38779					40	21	3	0	0	0	0.4196	1	8260	8260		46.766	0	1	1323300			9977	15104	7032	7040	11442	11442					0.013841681542885453
FYITVVGY	8	Unmodified	_FYITVVGY_					0	0	0		nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2;nc|ENSG00000173698|Q8IZP9-9|ADGRG2;nc|ENSG00000173698|Q8IZP9-7|ADGRG2;nc|ENSG00000173698|Q8IZP9-6|ADGRG2;nc|ENSG00000173698|Q8IZP9-3|ADGRG2;nc|ENSG00000173698|Q8IZP9-4|ADGRG2;nc|ENSG00000173698|Q8IZP9-2|ADGRG2;ENSG00000173698|ENST00000379869|ADGRG2;nc|ENSG00000173698|Q8IZP9-10|ADGRG2	nc|ENSG00000173698|Q8IZP9-8|ADGRG2	nc|ENSG00000173698|Q8IZP9-8|ADGRG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.2539367675781	2	481.255111	960.49567	-0.56813	-0.00027341	-2.9629	-0.0014259	-3.5311	-0.0016993	481.2536530446073	73.263	0.75666	73.817	73.397	74.153	0.55386					33	23	2	0	0	0	0.45589	1	8234	8234		77.944	1.1697	1	1500300			9978	15104	7032	7040	11443	11443					0.013841681542885453
FYIVVAFV	8	Unmodified	_FYIVVAFV_					0	0	0			REV__ENSG00000058262|ENST00000243253|SEC61A1;REV__nc|ENSG00000065665|Q9H9S3-2|SEC61A2	REV__ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2773742675781	2	479.275847	956.537141	0.53004	0.00025403	2.5394	0.0012171	3.0695	0.0014711	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.88393	1	8276	8276		33.493	0.68056	1	2070000	+		9979	16434;29700	7033	7041	11444	11444					0.05713348913604932
FYIVVNNIF	9	Unmodified	_FYIVVNNIF_					0	0	0			REV__ENSG00000127530|ENST00000641666|OR7C1	REV__ENSG00000127530|ENST00000641666|OR7C1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.2998657226562	2	564.808042	1127.60153	1.8039	0.0010189	0.89704	0.00050665	2.7009	0.0015255	564.8085197843512	97.841	1.3555	98.226	97.765	99.12	0.38548					55	32	2	0	0	0	0.20789	1	11701	11701		31.955	18.996	1	121560	+		9980	18739	7034	7042	11445	11445					0.042835039997498825
FYKEKKEILSL	11	Unmodified	_FYKEKKEILSL_					0	0	0		ENSG00000145721|ENST00000274382|LIX1	ENSG00000145721|ENST00000274382|LIX1	ENSG00000145721|ENST00000274382|LIX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.9425048828125	3	466.606144	1396.7966	0.76537	0.00035713	3.2827	0.0015317	4.0481	0.0018889	466.60758822103855	100.27	2.2686	100.42	99.189	101.46	0.15073					150	53	4	0	0	0	0.76579	1	10491	10491		18.531	1.3643	1	578170			9981	4786	7035	7043	11446	11446					0.11407630014105052
FYKHRKRRAPV	11	Unmodified	_FYKHRKRRAPV_					0	0	0		nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.6265869140625	3	486.624866	1456.85277	4.4394	0.0021603	0.35323	0.00017189	4.7926	0.0023322	486.6250467267242	107.05	0.79998	107.2	106.9	107.7	0.14929					47	28	2	0	0	0	0.73621	1	13115	13115		25.126	9.7885	1	373740			9982	15368	7036	7044	11447	11447					0.1426174048476696
FYKHRKRRAPV	11	Unmodified	_FYKHRKRRAPV_					0	0	0		nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	486.624866	1456.85277	-0.78834	-0.00038363	5.8711	0.002857	5.0828	0.0024734	486.62764185767105	107.4	0.74453	107.4	107.02	107.77	0	0.12915	0.0021386	NaN	25.126	32	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	399770			9983	15368	7036	7044							0.1426174048476696
FYKHRKRRAPV	11	Unmodified	_FYKHRKRRAPV_					0	0	0		nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	486.624866	1456.85277	-0.085946	-4.1823E-05	5.1241	0.0024935	5.0382	0.0024517	486.6272773265335	107.46	0.88527	107.43	106.86	107.75	-0.034409	0.15443	0.0010481	NaN	25.126	52	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	369960			9984	15368	7036	7044							0.1426174048476696
FYKHRKRRAPV	11	Unmodified	_FYKHRKRRAPV_					0	0	0		nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	486.624866	1456.85277	2.8343	0.0013793	2.4897	0.0012116	5.324	0.0025908	486.6258919582391	107.34	1.017	107.3	106.75	107.77	-0.034134	0.028619	-0.0027978	NaN	25.126	72	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	376940			9985	15368	7036	7044							0.1426174048476696
FYKHRKRRAPV	11	Unmodified	_FYKHRKRRAPV_					0	0	0		nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	486.624866	1456.85277	-0.8967	-0.00043636	6.0145	0.0029268	5.1178	0.0024904	486.62753659532495	107.15	1.2817	107.19	106.54	107.82	0.035622	-0.086384	0.0023479	NaN	25.126	69	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	390850			9986	15368	7036	7044							0.1426174048476696
FYKHRKRRAPV	11	Unmodified	_FYKHRKRRAPV_					0	0	0		nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	486.624866	1456.85277	0.7894	0.00038414	4.1775	0.0020329	4.9669	0.002417	486.6269426146518	107.13	0.43381	107.22	107.11	107.55	0.091255	-0.052911	-0.00033377	NaN	25.126	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99015			9987	15368	7036	7044							0.1426174048476696
FYKHRKRRAPV	11	Unmodified	_FYKHRKRRAPV_					0	0	0		nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	486.624866	1456.85277	1.8943	0.00092183	2.9643	0.0014425	4.8586	0.0023643	486.62614710515385	107.07	0.77946	107.18	106.86	107.64	0.10396	-0.096806	-0.002105	NaN	25.126	47	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189080			9988	15368	7036	7044							0.1426174048476696
FYKIKKAN	8	Unmodified	_FYKIKKAN_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.30029296875	2	506.302927	1010.5913	0.17096	8.6557E-05	-4.0984	-0.0020751	-3.9275	-0.0019885	506.30077801441314	96.371	1.2912	96.419	95.878	97.169	0.047798					71	29	3	0	0	0	0.884	1	10196	10196		33.516	9.3128	1	516710	+		9989	23882	7037	7045	11448	11448					0.0864294106518173
FYKIRLPEREK	11	Unmodified	_FYKIRLPEREK_					0	0	0		ENSG00000083857|ENST00000441802|FAT1	ENSG00000083857|ENST00000441802|FAT1	ENSG00000083857|ENST00000441802|FAT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.6208190917969	3	493.620788	1477.84053	-1.8007	-0.00088885	2.2728	0.0011219	0.47218	0.00023308	493.6218802691259	31.167	0.9176	31.167	30.72	31.638	0					75	31	3	0	0	0	0.74771	1	1448	1448		22.562	2.5311	1	50794			9990	1509	7038	7046	11449	11449					0.12072659231057514
FYKIRTIA	8	Unmodified	_FYKIRTIA_					0	0	0		ENSG00000119638|ENST00000238616|NEK9;ENST00000556170.5_1_14:75553702-75572727:-|nuORF;ENST00000557026.5_1_14:75551269-75572727:-|nuORF	ENSG00000119638|ENST00000238616|NEK9	ENSG00000119638|ENST00000238616|NEK9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3008728027344	2	506.302927	1010.5913	-1.5945	-0.00080728	-2.0434	-0.0010346	-3.6379	-0.0018419	506.30185711798276	96.376	1.2072	96.579	96.02	97.227	0.20241					70	27	3	0	0	0	0.87064	1	9858	9858		29.15	1.2673	1	332450			9991	3081	7039	7047	11450	11450					0.086429410651931
FYKITTYS	8	Unmodified	_FYKITTYS_					0	0	0			REV__ENSG00000180251|ENST00000295269|SLC9A4	REV__ENSG00000180251|ENST00000295269|SLC9A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.7668762207031	2	511.7633	1021.51205	2.1591	0.001105	4.3975	0.0022505	6.5566	0.0033554	511.76543960358885	27.056	0.91154	26.716	26.414	27.325	-0.34035					28	20	3	0	0	0	0.89962	1	1546	1546		38.806	2.3594	1	164160	+		9992	22383	7040	7048	11451	11451					0.002152493203652739
FYKRVTETPP	10	Unmodified	_FYKRVTETPP_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024146	REV__CON__ENSEMBL:ENSBTAP00000024146	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3328247070312	2	619.332413	1236.65027	0.71946	0.00044559	-0.69996	-0.00043351	0.0195	1.2077E-05	619.331937270121	58.256	0.91434	58.809	58.428	59.343	0.55323					67	21	4	0	0	0	0.64457	1	6130	6130		47.657	6.8792	1	3775100	+	+	9993	15963	7041	7049	11452	11452					0.04141372568847146
FYLAQLPG	8	Unmodified	_FYLAQLPG_					0	0	0			REV__ENST00000318003.11_1_19:14041215-14041674:+|nuORF	REV__ENST00000318003.11_1_19:14041215-14041674:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	454.7452697753906	2	454.747453	907.480354	-1.1674	-0.00053087	-4.4673	-0.0020315	-5.6347	-0.0025623	454.7453088336953	103.87	1.2348	104.04	103.57	104.81	0.17095					57	30	3	0	0	0	0.87276	1	10989	10989		29.842	1.9593	1	408010	+		9994	24968	7042	7050	11453	11453					0.02291301357104203
FYLCCHVRNDQ	11	Unmodified	_FYLCCHVRNDQ_					0	0	0			REV__ENSG00000108387|ENST00000672673|SEPTIN4	REV__ENSG00000108387|ENST00000672673|SEPTIN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.5392150878906	3	466.541151	1396.60162	-1.3813	-0.00064444	-3.4291	-0.0015998	-4.8104	-0.0022442	466.5398648650698	30.629	1.8414	30.658	29.964	31.805	0.028618					115	41	6	0	0	0	0.62914	1	2035	2035		41.08	3.4802	1	9322400	+		9995	17706	7043	7051	11454	11454					-0.08081187334209972
FYLIGLIHFV	10	Unmodified	_FYLIGLIHFV_					0	0	0			REV__ENST00000561012.5_1_15:80390870-80403836:+|nuORF	REV__ENST00000561012.5_1_15:80390870-80403836:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3533935546875	2	611.35516	1220.69577	0.85003	0.00051967	0.49758	0.0003042	1.3476	0.00082387	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.86786	1	9424	9424		26.796	2.2769	1	6836400	+		9996	28772	7044	7052	11455	11455					0.09424642821863927
FYLILKKRM	9	Unmodified	_FYLILKKRM_					0	0	0			REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	606.369873046875	2	606.370287	1210.72602	-0.46367	-0.00028116	-0.87211	-0.00052882	-1.3358	-0.00080998	606.3696540978959	94.435	3.8289	94.503	93.215	97.044	0.068336					198	90	3	0	0	0	0.7932	2	9864	9799;9864		26.796	6.7656	1	750990	+		9997	23137	7045	7053	11456;11457	11457					0.12908678215421787
FYLILKKRM	9	Unmodified	_FYLILKKRM_					0	0	0			REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3693237304688	2	606.370287	1210.72602	2.2948	0.0013915	-3.6111	-0.0021896	-1.3163	-0.00079817	606.3679986963975	94.415	3.2479	94.356	93.249	96.497	-0.059212					198	76	3	0	0	0	0.77546	1	10118	10118		31.955	7.4357	1	800340	+		9998	23137	7045	7053	11458	11458					0.12908678215421787
FYLILSFV	8	Unmodified	_FYLILSFV_					0	0	0			REV__ENST00000519130.5_1_5:170337927-170338173:+|nuORF	REV__ENST00000519130.5_1_5:170337927-170338173:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29010009765625	2	501.288954	1000.56336	0.65623	0.00032896	2.1204	0.0010629	2.7767	0.0013919	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.87276	1	8199	8199		29.842	4.3914	1	2931000	+		9999	28072	7046	7054	11459	11459					0.06309618085094826
FYLRIPGSKK	10	Unmodified	_FYLRIPGSKK_					0	0	0		ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.8578491210938	2	604.861141	1207.70773	-1.0601	-0.00064122	-3.775	-0.0022834	-4.8352	-0.0029246	604.8590287609827	81.871	2.3278	81.986	81.043	83.371	0.11426					72	54	2	0	0	0	0.82886	1	7833	7833		37.812	16.865	1	398390			10000	1026	7047	7055	11460	11460					0.11218259565066546
FYLRIPGSKK	10	Unmodified	_FYLRIPGSKK_					0	0	0		ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5749206542969	3	403.576519	1207.70773	-0.18431	-7.4383E-05	-4.1628	-0.00168	-4.3471	-0.0017544	403.57480385646164	80.099	0.84451	80.626	80.105	80.949	0.52676					63	19	4	0	0	0	0.80179	1	9214	9214		36.318	4.6834	1	4093300			10001	1026	7047	7055	11461	11461					0.11218259565066546
FYLSFCNSYT	10	Unmodified	_FYLSFCNSYT_					0	0	0		ENSG00000204442|ENST00000375915|NALF1	ENSG00000204442|ENST00000375915|NALF1	ENSG00000204442|ENST00000375915|NALF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.7702026367188	2	622.768257	1243.52196	0.075961	4.7306E-05	4.2447	0.0026435	4.3207	0.0026908	622.7705915202106	80.372	1.5481	80.793	80.002	81.55	0.4215					87	36	4	0	0	0	0.86297	1	9257	9257		27.047	0	1	1005000			10002	8443	7048	7056	11462	11462					-0.0900593073656637
FYLSLALTLS	10	Unmodified	_FYLSLALTLS_					0	0	0			REV__ENST00000424408.6_1_6:112575345-112575621:-|nuORF	REV__ENST00000424408.6_1_6:112575345-112575621:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.323486328125	2	564.320983	1126.62741	0.85505	0.00048252	3.2454	0.0018315	4.1005	0.002314	564.3227484395347	16.363	0.50572	15.764	15.555	16.06	-0.59873					26	10	4	0	0	0	0.77314	1	115	115		40.778	6.6056	1	893940	+		10003	26517	7049	7057	11463	11463					0.06916353451356372
FYLYEPMWHLW	11	Unmodified	_FYLYEPMWHLW_					0	0	0		ENSG00000147119|ENST00000276055|CHST7	ENSG00000147119|ENST00000276055|CHST7	ENSG00000147119|ENST00000276055|CHST7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.2850341796875	3	528.916324	1583.72714	0.13193	6.9779E-05	1.5665	0.00082853	1.6984	0.00089831	529.2506472730555	38.471	0.27879	38.813	38.618	38.896	0.34187					8	6	2	0	0	0	0.18191	1	3161	3161		10.104	0.45776	1	34321			10004	4882	7050	7058	11464	11464					-0.04137152206317296
FYMCQGLLSD	10	Oxidation (M)	_FYM(Oxidation (M))CQGLLSD_		FYM(1)CQGLLSD		FYM(51)CQGLLSD	0	0	1			REV__ENSG00000213380|ENST00000306875|COG8	REV__ENSG00000213380|ENST00000306875|COG8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.7567138671875	2	596.754292	1191.49403	-0.1923	-0.00011476	1.8835	0.001124	1.6912	0.0010092	596.7552432014232	43.02	0.76817	42.991	42.675	43.443	-0.029465					49	17	4	0	0	0	0.5766	1	3236	3236		51.335	6.3133	1	1058300	+		10005	23614	7051	7059	11465	11465		365			-0.09405576988274333
FYMILVRKSL	10	Unmodified	_FYMILVRKSL_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-6|NDC1	REV__nc|ENSG00000058804|Q9BTX1-6|NDC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8927001953125	2	635.373026	1268.7315	0.93437	0.00059367	-1.4045	-0.00089237	-0.47011	-0.00029869	635.3718339408782	105.52	0.3012	105.63	105.43	105.73	0.10766					12	7	2	0	0	0	0.37624	1	11237	11237		34.173	2.6427	1	185640	+		10006	16441	7052	7060	11466	11466					0.1078835700725449
FYPKYKNLFK	10	Unmodified	_FYPKYKNLFK_					0	0	0		ENST00000488374.5_1_3:167517863-167543108:+|nuORF	ENST00000488374.5_1_3:167517863-167543108:+|nuORF	ENST00000488374.5_1_3:167517863-167543108:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.9225158691406	3	449.920174	1346.73869	1.9071	0.00085802	2.8845	0.0012978	4.7915	0.0021558	449.9213930016464	24.504	0.75368	23.991	23.746	24.499	-0.51365					41	16	4	0	0	0	0.86106	1	1209	1209		33.922	4.3709	1	270490			10007	12625	7053	7061	11467	11467					0.07919412879277843
FYPVLVDLPD	10	Unmodified	_FYPVLVDLPD_					0	0	0			REV__ENST00000570923.1_1_17:78185753-78194107:-|nuORF	REV__ENST00000570923.1_1_17:78185753-78194107:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.342529296875	2	589.310615	1176.60668	0.82151	0.00048413	3.7352	0.0022012	4.5567	0.0026853	589.3109662349806	93.18	0.20602	93.339	93.24	93.446	0.15875					6	4	2	0	0	0	0.37624	1	9465	9465		20.947	0	1	40690	+		10008	22464	7054	7062	11468	11468					0.02543763071707872
FYQLIVIF	8	Unmodified	_FYQLIVIF_					0	0	0		nc|ENSG00000058668|P23634-5|ATP2B4;nc|ENSG00000058668|P23634-4|ATP2B4;nc|ENSG00000058668|P23634-3|ATP2B4;nc|ENSG00000058668|P23634-2|ATP2B4;nc|ENSG00000058668|P23634-7|ATP2B4;ENSG00000058668|ENST00000357681|ATP2B4;nc|ENSG00000058668|P23634-8|ATP2B4;nc|ENSG00000058668|P23634|ATP2B4	nc|ENSG00000058668|P23634-5|ATP2B4	nc|ENSG00000058668|P23634-5|ATP2B4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	521.7999877929688	2	521.802229	1041.5899	-0.043464	-2.2679E-05	-3.6905	-0.0019257	-3.734	-0.0019484	521.800132205599	77.617	0.67676	77.67	77.364	78.041	0.052704					73	30	3	0	0	0	0.67263	1	7502	7502		68.485	20.569	1	504130			10009	1045	7055	7063	11469	11469					0.07077306976407272
FYRDFSIL	8	Unmodified	_FYRDFSIL_					0	0	0			REV__nc|ENSG00000168539|P11229-2|CHRM1	REV__nc|ENSG00000168539|P11229-2|CHRM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.7791137695312	2	530.776742	1059.53893	-0.3325	-0.00017648	4.4539	0.002364	4.1214	0.0021875	530.7789303124472	57.032	1.1704	57.429	57.029	58.199	0.39672					55	26	3	0	0	0	0.92973	1	5899	5899		50.025	0	1	3032800	+		10010	21499	7056	7064	11470	11470					0.011543579315684838
FYRFLKLF	8	Unmodified	_FYRFLKLF_					0	0	0			REV__ENST00000502290.1_1_4:141463686-141471526:+|nuORF	REV__ENST00000502290.1_1_4:141463686-141471526:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.33056640625	2	567.328945	1132.64334	1.8589	0.0010546	-0.36938	-0.00020956	1.4895	0.00084506	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.81548	1	9660	9660		20.482	2.1574	1	15439000	+		10011	27818	7057	7065	11471	11471					0.08232104478906876
FYRVMKKIT	9	Unmodified	_FYRVMKKIT_					0	0	0			REV__ENST00000533462.5_1_11:118220478-118220508:+|nuORF	REV__ENST00000533462.5_1_11:118220478-118220508:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.3443603515625	2	593.344269	1184.67399	0.88437	0.00052473	-0.63613	-0.00037744	0.24824	0.00014729	593.343785503265	103.21	2.4131	103.4	103.04	105.46	0.18297					159	60	4	0	0	0	0.78058	1	10952	10952		30.504	2.6214	1	4232500	+		10012	28346	7058	7066	11472	11472					0.08903514801681922
FYSEEYYDD	9	Unmodified	_FYSEEYYDD_					0	0	0			REV__ENST00000494443.5_1_X:153608322-153608766:+|nuORF	REV__ENST00000494443.5_1_X:153608322-153608766:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	616.2380981445312	2	615.727309	1229.44006	0.5824	0.0003586	2.2874	0.0014084	2.8698	0.001767	615.7286366243526	21.803	1.5654	21.868	20.974	22.539	0.064745					89	57	2	0	0	0	0.7932	1	604	604		24.203	8.5609	1	41297	+		10013	17325	7059	7067	11473	11473					-0.16547754614657606
FYSIMRIY	8	Unmodified	_FYSIMRIY_					0	0	0		ENSG00000179813|ENST00000313851|FAM216B	ENSG00000179813|ENST00000313851|FAM216B	ENSG00000179813|ENST00000313851|FAM216B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.287109375	2	546.78097	1091.54739	-0.33634	-0.0001839	2.3279	0.0012728	1.9915	0.0010889	546.7821741319054	64.137	0.40936	64.164	63.87	64.279	0.027138					13	10	2	0	0	0	0.87479	1	6026	6026		30.504	0.6621	1	47042			10014	7292	7060	7068	11474	11474					0.005275885765513522
FYTEWWREKRM	11	Unmodified	_FYTEWWREKRM_					0	0	0		ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.5985107421875	3	544.597766	1630.77147	-1.6855	-0.00091793	1.5571	0.00084799	-0.12843	-6.9944E-05	544.5986714358974	17.944	0.39056	17.944	17.733	18.123	0					43	17	4	0	0	0	0.7896	1	248	248		13.508	8.095	1	88736			10015	9693	7061	7069	11475	11475					-0.01868748060201142
FYTEWWREKRM	11	Unmodified	_FYTEWWREKRM_					0	0	0		ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.5977783203125	3	544.597766	1630.77147	0.78071	0.00042518	-1.122	-0.00061106	-0.34132	-0.00018588	544.5971044567456	17.861	0.50571	17.936	17.718	18.223	0.075443					34	15	3	0	0	0	0.85439	1	213	213		5.6988	0	1	95275			10016	9693	7061	7069	11476	11476					-0.01868748060201142
FYTEWWREKRM	11	Unmodified	_FYTEWWREKRM_					0	0	0		ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.5975341796875	3	544.597766	1630.77147	0.77982	0.00042469	-1.1224	-0.00061124	-0.34255	-0.00018655	544.5970482837994	18.741	1.154	18.815	18.483	19.637	0.073465					87	38	5	0	0	0	0.85439	1	313	313		5.6988	0.28586	1	464850			10017	9693	7061	7069	11477	11477					-0.01868748060201142
FYTEWWREKRM	11	Unmodified	_FYTEWWREKRM_					0	0	0		ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.5983276367188	3	544.597766	1630.77147	0.44754	0.00024373	-0.62854	-0.0003423	-0.181	-9.8573E-05	544.9317423239131	18.133	0.53688	18.056	17.826	18.363	-0.07671					40	17	3	0	0	0	0.85439	1	280	280		5.6988	0.28586	1	79851			10018	9693	7061	7069	11478	11478					-0.01868748060201142
FYTEWWREKRM	11	Unmodified	_FYTEWWREKRM_					0	0	0		ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.5975952148438	3	544.597766	1630.77147	0.44796	0.00024396	-0.7506	-0.00040878	-0.30265	-0.00016482	544.5971942899829	19.073	1.2025	18.999	18.407	19.61	-0.073704					84	34	5	0	0	0	0.79716	1	405	405		11.932	5.6115	1	560170			10019	9693	7061	7069	11479	11479					-0.01868748060201142
FYTEWWREKRM	11	Unmodified	_FYTEWWREKRM_					0	0	0		ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.59912109375	3	544.597766	1630.77147	1.0053	0.00054747	-1.2528	-0.00068225	-0.24748	-0.00013478	544.597079666646	18.141	0.56901	18.062	17.802	18.371	-0.078943					50	23	3	0	0	0	0.77205	1	290	290		17.167	3.6588	1	74867			10020	9693	7061	7069	11480	11480					-0.01868748060201142
FYTEWWREKRM	11	Unmodified	_FYTEWWREKRM_					0	0	0		ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.59814453125	3	544.597766	1630.77147	0.013729	7.4765E-06	-0.38547	-0.00020992	-0.37174	-0.00020245	544.5975442812853	18.39	0.65404	17.913	17.703	18.357	-0.47694					29	13	3	0	0	0	0.81021	1	383	383		9.2118	0.41249	1	289970			10021	9693	7061	7069	11481	11481					-0.01868748060201142
FYTEWWREKRM	11	Unmodified	_FYTEWWREKRM_					0	0	0		ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.9282836914062	3	544.597766	1630.77147	0.090088	4.9062E-05	-0.21976	-0.00011968	-0.12967	-7.0617E-05	544.5975258990705	19.864	1.3438	19.394	18.745	20.089	-0.46967					66	28	5	0	0	0	0.8498	2	549	549;584		6.001	2.5923	1	824280			10022	9693	7061	7069	11482;11483	11482					-0.01868748060201142
FYTEWWREKRM	11	Unmodified	_FYTEWWREKRM_					0	0	0		ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.9319458007812	3	544.597766	1630.77147	-0.057078	-3.1084E-05	-0.32274	-0.00017576	-0.37982	-0.00020685	544.5975642680233	18.551	0.61191	17.929	17.676	18.288	-0.62141					36	13	4	0	0	0	0.85439	1	426	426		5.6988	2.2901	1	307690			10023	9693	7061	7069	11484	11484					-0.01868748060201142
FYTEWWREKRM	11	Unmodified	_FYTEWWREKRM_					0	0	0		ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.931884765625	3	544.597766	1630.77147	-0.16088	-8.7613E-05	-0.02171	-1.1823E-05	-0.18259	-9.9436E-05	544.597658970736	19.993	1.36	19.364	18.801	20.161	-0.62961					69	29	5	0	0	0	0.85439	2	590	590;629		5.6988	2.0797	1	1084200			10024	9693	7061	7069	11485;11486	11485					-0.01868748060201142
FYTKEINRVL	10	Unmodified	_FYTKEINRVL_					0	0	0		nc|ENSG00000171100|Q13496-2|MTM1;ENSG00000171100|ENST00000370396|MTM1	nc|ENSG00000171100|Q13496-2|MTM1	nc|ENSG00000171100|Q13496-2|MTM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.364013671875	2	641.861338	1281.70812	-0.046786	-3.003E-05	-1.5534	-0.0009971	-1.6002	-0.0010271	642.3619686544171	113.17	0.33764	113.1	112.9	113.24	-0.067215					42	13	4	0	0	0	0.86272	1	12297	12297		24.519	1.9395	1	78874			10025	6638	7062	7070	11487	11487					0.0785363449426768
FYVGAPLPTQM	11	Unmodified	_FYVGAPLPTQM_					0	0	0			REV__nc|ENSG00000186090|Q70Z44|HTR3D	REV__nc|ENSG00000186090|Q70Z44|HTR3D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.2923889160156	3	408.542487	1222.60563	-0.10984	-4.4873E-05	1.7759	0.00072554	1.6661	0.00068067	408.54300850238457	57.681	1.8682	58.075	57.535	59.403	0.39407					89	45	3	0	0	0	0.1728	1	6092	6092		16.53	0.6092	1	1119500	+		10026	30105	7063	7071	11488	11488					0.0032322543115697044
FYVLIKWPK	9	Unmodified	_FYVLIKWPK_					0	0	0			REV__ENST00000357613.8_1_16:75481071-75481158:-|nuORF	REV__ENST00000357613.8_1_16:75481071-75481158:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.8557739257812	2	597.357702	1192.70085	1.5032	0.00089792	-4.2315	-0.0025277	-2.7284	-0.0016298	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.77546	1	10875	10875		31.955	3.8734	1	1501500	+		10027	25417	7064	7072	11489	11489					0.11220946684511546
FYVLIKWPK	9	Unmodified	_FYVLIKWPK_					0	0	0			REV__ENST00000357613.8_1_16:75481071-75481158:-|nuORF	REV__ENST00000357613.8_1_16:75481071-75481158:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.8564453125	2	597.357702	1192.70085	-0.84393	-0.00050413	-1.9946	-0.0011915	-2.8385	-0.0016956	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.7932	2	10927	10927;10963		26.796	4.1873	1	1407500	+		10028	25417	7064	7072	11490;11491	11490					0.11220946684511546
FYVLQMRRKL	10	Unmodified	_FYVLQMRRKL_					0	0	0			REV__ENST00000358075.10_1_X:77084599-77084677:-|nuORF	REV__ENST00000358075.10_1_X:77084599-77084677:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9327392578125	3	451.932309	1352.7751	-0.13819	-6.2454E-05	0.89095	0.00040265	0.75276	0.0003402	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.86698	1	10732	10732		28.081	2.0181	1	924270	+		10029	25425	7065	7073	11492	11492					0.112819665043844
FYVLQMRRKL	10	Unmodified	_FYVLQMRRKL_					0	0	0			REV__ENST00000358075.10_1_X:77084599-77084677:-|nuORF	REV__ENST00000358075.10_1_X:77084599-77084677:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9328918457031	3	451.932309	1352.7751	0.75363	0.00034059	0.067854	3.0665E-05	0.82148	0.00037125	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.86698	1	10489	10489		28.081	6.3011	1	952120	+		10030	25425	7065	7073	11493	11493					0.112819665043844
FYVLQMRRKL	10	Unmodified	_FYVLQMRRKL_					0	0	0			REV__ENST00000358075.10_1_X:77084599-77084677:-|nuORF	REV__ENST00000358075.10_1_X:77084599-77084677:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.26727294921875	3	451.932309	1352.7751	2.1819	0.00098608	-1.326	-0.00059924	0.85595	0.00038683	451.9316131706083	100.36	1.9025	100.71	99.62	101.52	0.3459					138	47	4	0	0	0	0.86587	1	12237	12237		29.17	1.0886	1	885260	+		10031	25425	7065	7073	11494	11494					0.112819665043844
GAAAPRLR	8	Unmodified	_GAAAPRLR_					0	0	0		ENST00000356518.6_1_20:3654099-3654460:-|nuORF	ENST00000356518.6_1_20:3654099-3654460:-|nuORF;REV__ENSG00000135776|ENST00000344517|ABCB10	REV__ENSG00000135776|ENST00000344517|ABCB10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24884033203125	2	406.248486	810.48242	3.144	0.0012772	-2.6463	-0.0010751	0.49768	0.00020218	406.2473237922933	114.03	1.1173	114.05	113.12	114.24	0.020027					74	50	2	0	0	0	0.80706	1	13701	13701		19.36	1.0356	1	65995			10032	19250;10369	7066	7074	11495	11495					0.06959774885558545
GAAGKLRAP	9	Unmodified	_GAAGKLRAP_					0	0	0		nc|ENSG00000142186|Q96KG9-6|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.75421142578125	2	420.756144	839.497735	-1.8952	-0.0007974	-0.59321	-0.0002496	-2.4884	-0.001047	420.75579416819653	20.848	1.2575	20.894	19.905	21.163	0.045401					83	61	2	0	0	0	0.7932	1	513	513		24.203	0	1	128270			10033	14969	7067	7075	11496	11496					0.07156641682752252
GAAGKLRAP	9	Unmodified	_GAAGKLRAP_					0	0	0		nc|ENSG00000142186|Q96KG9-6|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.7549743652344	2	420.756144	839.497735	0.18337	7.7154E-05	-2.3767	-0.001	-2.1933	-0.00092286	420.7550318985828	22.352	1.7415	21.741	20.512	22.253	-0.6107					82	43	2	0	0	0	0.76996	2	891	813;891		33.516	1.2474	1	550570			10034	14969	7067	7075	11497;11498	11498					0.07156641682752252
GAAGVHFIY	9	Unmodified	_GAAGVHFIY_					0	0	0		ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.74029541015625	2	467.742702	933.470852	0.17529	8.1989E-05	-0.0523	-2.4463E-05	0.12299	5.7526E-05	467.7424649813079	54.516	0.79655	54.922	54.573	55.369	0.40663					37	18	3	0	0	0	0.72098	1	5560	5560		39.021	3.4032	1	909810			10035	6525	7068	7076	11499	11499					0.0014553307156575102
GAAGVHFIY	9	Unmodified	_GAAGVHFIY_					0	0	0		ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7400817871094	2	467.742702	933.470852	-0.82539	-0.00038607	1.0539	0.00049296	0.22853	0.00010689	467.7430106907826	54.268	0.70956	54.853	54.543	55.253	0.58474					35	16	3	0	0	0	0.36201	1	5539	5539		60.404	25.203	1	1086300			10036	6525	7068	7076	11500	11500					0.0014553307156575102
GAAILIKAVDY	11	Unmodified	_GAAILIKAVDY_					0	0	0			REV__ENSG00000101745|ENST00000262126|ANKRD12	REV__ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3306884765625	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.77937	1	9143	9143		15.642	1.8665	1	17338000	+		10037	17298	7069	7077	11501	11501					0.0881915819995811
GAAKVAAALE	10	Unmodified	_GAAKVAAALE_					0	0	0		ENSG00000165566|ENST00000515384|AMER2;nc|ENSG00000165566|Q8N7J2-2|AMER2	ENSG00000165566|ENST00000515384|AMER2	ENSG00000165566|ENST00000515384|AMER2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.76104736328125	2	450.761092	899.507631	-0.14597	-6.5799E-05	-0.36324	-0.00016374	-0.50922	-0.00022954	450.7611164931486	33.67	0.91978	33.84	33.399	34.319	0.16971					34	21	2	0	0	0	0.67571	1	2435	2435		45.972	0.020292	1	556190			10038	6096	7070	7078	11502	11502					0.0538578489745305
GAAPPTLPR	9	Unmodified	_GAAPPTLPR_					0	0	0			REV__nc|ENSG00000109118|Q96QT6-4|PHF12	REV__nc|ENSG00000109118|Q96QT6-4|PHF12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2542419433594	2	440.255977	878.497401	-0.98132	-0.00043203	-0.72631	-0.00031976	-1.7076	-0.00075179	440.2555879612135	73.888	0.66461	74.276	73.956	74.62	0.38779					36	16	3	0	0	0	0.78058	1	8334	8334		30.504	5.0535	1	722590	+		10039	17749	7071	7079	11503	11503					0.05329221962892916
GAAQHHRTLR	10	Unmodified	_GAAQHHRTLR_					0	0	0			REV__ENST00000282516.12_2_5:36876878-36877172:+|nuORF	REV__ENST00000282516.12_2_5:36876878-36877172:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.816650390625	2	573.815587	1145.61662	0.47618	0.00027324	2.0381	0.0011695	2.5143	0.0014427	573.8166032618375	36.182	1.0397	36.213	35.726	36.765	0.031132					71	29	3	0	0	0	0.80179	1	1950	1950		39.253	1.4413	1	967530	+		10040	24615	7072	7080	11504	11504					0.04963808640309253
GAARAFVGQ	9	Unmodified	_GAARAFVGQ_					0	0	0			REV__ENST00000468778.5_1_2:74649977-74650720:+|nuORF	REV__ENST00000468778.5_1_2:74649977-74650720:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.7391357421875	2	438.737951	875.46135	0.46295	0.00020311	-0.08541	-3.7472E-05	0.37754	0.00016564	438.7376945860132	21.924	0.52766	21.481	21.235	21.762	-0.44324					25	11	3	0	0	0	0.74721	1	866	866		37.159	1.5408	1	52402	+		10041	27187	7073	7081	11505	11505					0.01863764786048705
GAARAFVGQ	9	Unmodified	_GAARAFVGQ_					0	0	0			REV__ENST00000468778.5_1_2:74649977-74650720:+|nuORF	REV__ENST00000468778.5_1_2:74649977-74650720:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	438.737951	875.46135	0.46295	0.00020311	-0.08541	-3.7472E-05	0.37754	0.00016564	438.7376945860132	21.924	0.52766	21.481	21.235	21.762	-0.44324	-0.029472	-0.00030318	NaN	37.159	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52402	+		10042	27187	7073	7081							0.01863764786048705
GAARPQIK	8	Unmodified	_GAARPQIK_					0	0	0		nc|ENSG00000103056|Q9NY59-2|SMPD3;ENSG00000103056|ENST00000219334|SMPD3	nc|ENSG00000103056|Q9NY59-2|SMPD3	nc|ENSG00000103056|Q9NY59-2|SMPD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.7554931640625	2	420.756144	839.497735	0.18337	7.7154E-05	-2.3767	-0.001	-2.1933	-0.00092286	420.7550318985828	22.352	1.7415	21.741	20.512	22.253	-0.6107					82	43	2	0	0	0	0.87276	1	923	923		29.842	3.1486	1	550570			10043	2050	7074	7082	11506	11506					0.07156641682740883
GAARRRGA	8	Unmodified	_GAARRRGA_					0	0	0			REV__ENST00000480975.5_1_20:57464272-57485881:+|nuORF	REV__ENST00000480975.5_1_20:57464272-57485881:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.7415466308594	2	407.74136	813.468167	2.5329	0.0010328	-1.4361	-0.00058555	1.0968	0.00044723	407.7407372409023	25.549	1.0209	25.118	24.806	25.827	-0.4311					41	23	3	0	0	0	0.85787	1	1329	1329		9.4706	0.64823	1	494360	+		10044	27366	7075	7083	11507	11507					0.05397122457270598
GAASFIPIKQG	11	Unmodified	_GAASFIPIKQG_					0	0	0			REV__ENSG00000116039|ENST00000234396|ATP6V1B1	REV__ENSG00000116039|ENST00000234396|ATP6V1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	544.8065795898438	2	544.808574	1087.60259	0.78335	0.00042678	-4.4681	-0.0024342	-3.6847	-0.0020075	544.8060162221166	24.686	0.87633	24.7	24.336	25.212	0.013996					110	42	4	0	0	0	0.13306	2	860	860;875		85.161	7.8432	1	1007500	+		10045	18174	7076	7084	11508;11509	11508					0.06229718368649628
GAATTRIK	8	Unmodified	_GAATTRIK_					0	0	0		ENST00000498539.1_1_7:100174858-100175272:-|nuORF	ENST00000498539.1_1_7:100174858-100175272:-|nuORF	ENST00000498539.1_1_7:100174858-100175272:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.8013000488281	2	409.248152	816.481751	1.6085	0.00065827	-0.58005	-0.00023738	1.0284	0.00042089	409.2478199674295	19.837	1.1143	19.367	19.113	20.227	-0.46967					37	23	3	0	0	0	0.4196	1	576	576		27.882	3.6795	1	211930			10046	12828	7077	7085	11510	11510					0.06616935445856598
GAATTRIK	8	Unmodified	_GAATTRIK_					0	0	0		ENST00000498539.1_1_7:100174858-100175272:-|nuORF	ENST00000498539.1_1_7:100174858-100175272:-|nuORF	ENST00000498539.1_1_7:100174858-100175272:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.8014221191406	2	409.248152	816.481751	0.0074647	3.0549E-06	0.93926	0.00038439	0.94672	0.00038744	409.2484362752004	20.016	0.64166	19.386	19.122	19.764	-0.62961					28	13	3	0	0	0	0.4196	1	596	596		44.117	10.601	1	240320			10047	12828	7077	7085	11511	11511					0.06616935445856598
GAAVATPSPQN	11	Unmodified	_GAAVATPSPQN_					0	0	0			REV__nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	REV__nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.75592041015625	2	506.756538	1011.49852	-0.13539	-6.861E-05	0.36268	0.00018379	0.22729	0.00011518	506.7564845685622	23.172	0.53206	23.122	22.905	23.437	-0.050077					41	19	3	0	0	0	0.60058	1	744	744		44.377	1.9027	1	75641	+		10048	23044	7078	7086	11512	11512					-0.006766084588662125
GAAVGLHRS	9	Unmodified	_GAAVGLHRS_					0	0	0			REV__ENSG00000162738|ENST00000368061|VANGL2	REV__ENSG00000162738|ENST00000368061|VANGL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.8992004394531	2	434.243401	866.472249	0.39038	0.00016952	-0.64681	-0.00028087	-0.25643	-0.00011135	434.2430028528697	19.866	0.50718	19.236	18.983	19.49	-0.6296					17	10	2	0	0	0	0.20789	1	587	587		29.15	0	1	95351	+		10049	20843	7079	7087	11513	11513					0.03367167160331519
GADPKVFQ	8	Unmodified	_GADPKVFQ_					0	0	0			REV__ENST00000474733.5_1_7:76911883-76916812:+|nuORF	REV__ENST00000474733.5_1_7:76911883-76916812:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.2267761230469	2	431.226885	860.439217	2.9201	0.0012592	-2.3558	-0.0010159	0.56433	0.00024335	431.2258144078327	25.682	2.586	25.25	24.227	26.813	-0.4311					128	58	4	0	0	0	0.9295	1	1402	1402		55.504	7.8469	1	5689000	+		10050	27308	7080	7088	11514	11514					0.0034154031761772785
GADQPQAH	8	Unmodified	_GADQPQAH_					0	0	0			REV__ENSG00000120156|ENST00000380036|TEK	REV__ENSG00000120156|ENST00000380036|TEK	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.1758117675781	2	412.188291	822.36203	-1.9149	-0.00078932	-3.9445	-0.0016259	-5.8595	-0.0024152	412.1860467253517	94.749	0.45578	94.952	94.735	95.191	0.20242					15	10	2	0	0	0	0.4196	1	9620	9620		33.516	0	1	112320	+		10051	18400	7081	7089	11515	11515					-0.0562567789871764
GADTFLMA	8	Unmodified	_GADTFLMA_					0	0	0			REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.19366455078125	2	413.194196	824.37384	-0.086313	-3.5664E-05	-2.3678	-0.00097836	-2.4541	-0.001014	413.1936016248627	77.941	2.7232	78.504	78.093	80.816	0.56332					177	64	5	0	0	0	0.88915	1	8944	8944		35.201	3.2459	1	6380300	+		10052	16949	7082	7090	11516	11516					-0.0453719719973833
GADVGTSAGH	10	Unmodified	_GADVGTSAGH_					0	0	0			REV__ENST00000373779.7_2_1:29652185-29652539:+|nuORF	REV__ENST00000373779.7_2_1:29652185-29652539:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.7736511230469	2	436.198856	870.383159	-0.78712	-0.00034334	2.6615	0.001161	1.8744	0.00081762	436.20235281085644	27.763	0.39428	27.666	27.446	27.84	-0.096947					11	8	2	0	0	0	0.37624	1	1648	1648		19.997	0	1	20682	+		10053	25771	7083	7091	11517	11517					-0.05721712589854633
GADVRGCF	8	Unmodified	_GADVRGCF_					0	0	0		ENST00000503766.5_1_6:43190510-43190918:+|nuORF	ENST00000503766.5_1_6:43190510-43190918:+|nuORF	ENST00000503766.5_1_6:43190510-43190918:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.1756286621094	2	412.689613	823.364672	2.1266	0.00087763	0.90603	0.00037391	3.0326	0.0012515	412.69011338013115	94.986	0.84611	95.418	95.114	95.96	0.4324					24	20	2	0	0	0	0.4196	1	11321	11321		33.516	17.042	1	572680			10054	12892	7084	7092	11518	11518					-0.05407545765399391
GAEALERMF	9	Oxidation (M)	_GAEALERM(Oxidation (M))F_		GAEALERM(1)F		GAEALERM(100)F	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	520.24755859375	2	520.247492	1038.48043	0.36128	0.00018795	-0.53302	-0.0002773	-0.17174	-8.9348E-05	520.2470023371461	49.592	0.70284	49.634	49.348	50.051	0.04224					40	16	4	0	0	0	0.066118	2	3848	3848;3861		101.25	29.814	1	543180		+	10055	7934;579	7085	7093	11519;11520	11519		7			-0.03727066705209836
GAEALERMF	9	Oxidation (M)	_GAEALERM(Oxidation (M))F_		GAEALERM(1)F		GAEALERM(71)F	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	520.247802734375	2	520.247492	1038.48043	-0.18432	-9.5893E-05	-0.059266	-3.0833E-05	-0.24359	-0.00012673	520.2473815535596	49.591	0.91899	49.498	49.23	50.149	-0.093178					42	21	3	0	0	0	0.23176	1	3842	3842		70.816	14.382	1	534550		+	10056	7934;579	7085	7093	11521	11521		7			-0.03727066705209836
GAEALERMF	9	Oxidation (M)	_GAEALERM(Oxidation (M))F_					0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	520.247492	1038.48043	-1.3941	-0.00072526	0.79704	0.00041466	-0.59702	-0.0003106	520.2477874044299	49.411	0.60509	49.411	49.1	49.705	0	-0.078233	0.0008549	NaN	101.25	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120880		+	10057	7934;579	7085	7093				7			-0.03727066705209836
GAEALERMF	9	Oxidation (M)	_GAEALERM(Oxidation (M))F_					0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	520.247492	1038.48043	0.11046	5.7466E-05	-0.22699	-0.00011809	-0.11653	-6.0623E-05	520.2474463995062	49.464	0.48731	49.461	49.269	49.756	-0.0030327	-0.027828	-0.00021059	NaN	101.25	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63101		+	10058	7934;579	7085	7093				7			-0.03727066705209836
GAEALERMF	9	Oxidation (M)	_GAEALERM(Oxidation (M))F_					0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	520.247492	1038.48043	-0.34716	-0.00018061	0.28151	0.00014646	-0.065646	-3.4152E-05	520.2473929436702	49.488	0.57553	49.464	49.235	49.811	-0.024029	-0.024802	0.0003185	NaN	101.25	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64137		+	10059	7934;579	7085	7093				7			-0.03727066705209836
GAEALERMF	9	Oxidation (M)	_GAEALERM(Oxidation (M))F_					0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	520.247492	1038.48043	0.31182	0.00016223	-0.53754	-0.00027965	-0.22572	-0.00011743	520.2469293339459	49.532	0.39876	49.536	49.367	49.766	0.0035973	0.046711	-0.00053372	NaN	101.25	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112350		+	10060	7934;579	7085	7093				7			-0.03727066705209836
GAEALERMF	9	Oxidation (M)	_GAEALERM(Oxidation (M))F_					0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	520.247492	1038.48043	-0.29244	-0.00015214	0.12527	6.5171E-05	-0.16717	-8.6968E-05	520.2474330714465	49.586	0.78827	49.612	49.244	50.032	0.025578	0.12292	0.00015593	NaN	101.25	46	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	464220		+	10061	7934;579	7085	7093				7			-0.03727066705209836
GAEIVLKLPPN	11	Unmodified	_GAEIVLKLPPN_					0	0	0			REV__ENSG00000185467|ENST00000327442|KPNA7	REV__ENSG00000185467|ENST00000327442|KPNA7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.843017578125	2	575.845156	1149.67576	-0.46596	-0.00026832	-3.1419	-0.0018092	-3.6078	-0.0020776	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.61369	3	9157	9157;9181;9291		42.864	7.7122	1	3411000	+		10062	22767	7086	7094	11522;11523;11524	11522					0.10690847091291289
GAEIVLKLPPN	11	Unmodified	_GAEIVLKLPPN_					0	0	0			REV__ENSG00000185467|ENST00000327442|KPNA7	REV__ENSG00000185467|ENST00000327442|KPNA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8433227539062	2	575.845156	1149.67576	-0.99796	-0.00057467	-2.8602	-0.001647	-3.8582	-0.0022217	575.8433464319414	90.672	2.8412	90.741	88.754	91.595	0.069328					215	67	4	0	0	0	0.60058	3	9295	9270;9295;9343		44.377	11.565	1	1885000	+		10063	22767	7086	7094	11525;11526;11527	11526					0.10690847091291289
GAEIVLKLPPN	11	Unmodified	_GAEIVLKLPPN_					0	0	0			REV__ENSG00000185467|ENST00000327442|KPNA7	REV__ENSG00000185467|ENST00000327442|KPNA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.842529296875	2	575.845156	1149.67576	-0.99734	-0.00057431	-2.9254	-0.0016846	-3.9227	-0.0022589	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.51007	5	9646	9479;9550;9586;9646;9670		51.193	18.803	1	5638300	+		10064	22767	7086	7094	11528;11529;11530;11531;11532	11531					0.10690847091291289
GAEIVLKLPPN	11	Unmodified	_GAEIVLKLPPN_					0	0	0			REV__ENSG00000185467|ENST00000327442|KPNA7	REV__ENSG00000185467|ENST00000327442|KPNA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8427734375	2	575.845156	1149.67576	0.60609	0.00034901	-4.3948	-0.0025308	-3.7888	-0.0021817	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.66929	2	9012	9012;9024		36.447	8.3653	1	2381900	+		10065	22767	7086	7094	11533;11534	11533					0.10690847091291289
GAEIVLKLPPN	11	Unmodified	_GAEIVLKLPPN_					0	0	0			REV__ENSG00000185467|ENST00000327442|KPNA7	REV__ENSG00000185467|ENST00000327442|KPNA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8431396484375	2	575.845156	1149.67576	-1.368	-0.00078773	-2.557	-0.0014725	-3.925	-0.0022602	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.53361	3	9274	9157;9238;9274		49.536	22.843	1	6121300	+		10066	22767	7086	7094	11535;11536;11537	11537					0.10690847091291289
GAEIVLKLPPN	11	Unmodified	_GAEIVLKLPPN_					0	0	0			REV__ENSG00000185467|ENST00000327442|KPNA7	REV__ENSG00000185467|ENST00000327442|KPNA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8427734375	2	575.845156	1149.67576	-1.6501	-0.00095021	-2.5974	-0.0014957	-4.2475	-0.0024459	575.8434791868526	90.193	1.8473	90.663	90.18	92.028	0.47068					146	46	4	0	0	0	0.60058	2	10789	10789;10801		44.377	5.571	1	1810000	+		10067	22767	7086	7094	11538;11539	11538					0.10690847091291289
GAEVEVCH	8	Unmodified	_GAEVEVCH_					0	0	0		ENST00000565280.5_1_15:31198658-31229456:+|nuORF;ENSG00000198690|ENST00000362065|FAN1	ENST00000565280.5_1_15:31198658-31229456:+|nuORF	ENST00000565280.5_1_15:31198658-31229456:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.1889953613281	2	422.186903	842.359253	2.2164	0.00093575	1.5889	0.0006708	3.8053	0.0016065	422.18787253857664	105.23	1.5658	105.39	105.1	106.66	0.15583					118	51	5	0	0	0	0.9159	1	12867	12867		44.531	0	1	2294800			10068	8307	7087	7095	11540	11540					-0.06823269347876249
GAFALLKQ	8	Unmodified	_GAFALLKQ_					0	0	0			REV__ENSG00000164935|ENST00000297581|DCSTAMP	REV__ENSG00000164935|ENST00000297581|DCSTAMP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.25494384765625	2	424.255446	846.496338	1.1062	0.00046932	-0.59161	-0.00025099	0.51461	0.00021833	424.2550047858092	33.057	0.67409	33.269	32.935	33.609	0.21168					30	15	3	0	0	0	0.93529	1	2386	2386		52.299	4.3836	1	650140	+		10069	21132	7088	7096	11541	11541					0.06695007593987157
GAFFVGKR	8	Unmodified	_GAFFVGKR_					0	0	0			REV__nc|ENSG00000174576|Q8IUM7-3|NPAS4	REV__nc|ENSG00000174576|Q8IUM7-3|NPAS4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.2528381347656	2	441.253237	880.491922	-0.2776	-0.00012249	0.12002	5.2959E-05	-0.15758	-6.9534E-05	441.2530478984608	26.02	0.78994	25.762	25.424	26.214	-0.25721					36	17	4	0	0	0	0.87276	1	1387	1387		29.842	1.5873	1	210930	+		10070	22004	7089	7097	11542	11542					0.046895431710936464
GAFIHKVQ	8	Unmodified	_GAFIHKVQ_					0	0	0			REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2582092285156	2	450.25852	898.502486	-0.62857	-0.00028302	0.25064	0.00011285	-0.37793	-0.00017017	450.25857361491086	26.004	1.9799	25.747	25.175	27.155	-0.2572					122	44	6	0	0	0	0.73619	1	1384	1384		65.897	0	1	7125800	+		10071	19487	7090	7098	11543	11543					0.04917525825521807
GAFIHKVQ	8	Unmodified	_GAFIHKVQ_					0	0	0			REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2582702636719	2	450.25852	898.502486	2.5113	0.0011307	-3.0089	-0.0013548	-0.4977	-0.00022409	450.25712397191535	26.02	1.659	25.589	25.109	26.768	-0.4311					129	37	5	0	0	0	0.60155	1	1398	1398		71.378	8.0716	1	8434200	+		10072	19487	7090	7098	11544	11544					0.04917525825521807
GAFILMPK	8	Unmodified	_GAFILMPK_					0	0	0			REV__ENSG00000197498|ENST00000441448|RPF2	REV__ENSG00000197498|ENST00000441448|RPF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2471618652344	2	438.754224	875.493896	0.26309	0.00011543	4.4094	0.0019347	4.6725	0.0020501	438.7560529500289	23.776	0.50983	23.395	23.153	23.663	-0.38178					21	11	2	0	0	0	0.4196	1	1074	1074		42.474	17.024	1	186470	+		10073	23240	7091	7099	11545	11545					0.051168358646805245
GAFILMPK	8	Unmodified	_GAFILMPK_					0	0	0			REV__ENSG00000197498|ENST00000441448|RPF2	REV__ENSG00000197498|ENST00000441448|RPF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2464294433594	2	438.754224	875.493896	1.4545	0.00063815	3.3217	0.0014574	4.7762	0.0020956	438.7555514525484	23.714	0.76329	23.14	22.878	23.641	-0.57415					29	17	3	0	0	0	0.4196	1	1084	1084		74.517	19.752	1	189000	+		10074	23240	7091	7099	11546	11546					0.051168358646805245
GAGAAYRLT	9	Unmodified	_GAGAAYRLT_					0	0	0		ENST00000552953.5_1_12:57870050-57870416:-|nuORF	ENST00000552953.5_1_12:57870050-57870416:-|nuORF	ENST00000552953.5_1_12:57870050-57870416:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.238525390625	2	440.237784	878.461016	0.35302	0.00015541	-0.084134	-3.7039E-05	0.26889	0.00011837	440.237520875651	19.077	0.43112	18.448	18.28	18.711	-0.6296					14	9	2	0	0	0	0.78058	1	473	473		30.504	3.7075	1	60773			10075	13689	7092	7100	11547	11547					0.016923450661806783
GAGANGVV	8	Unmodified	_GAGANGVV_					0	0	0			REV__ENST00000537276.5_1_12:123416657-123444319:-|nuORF	REV__ENST00000537276.5_1_12:123416657-123444319:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	644.6614379882812	1	644.336215	643.328939	1.5304	0.00098612	4.0259	0.002594	5.5563	0.0035801	644.3394324165504	60.889	0.37011	60.99	60.747	61.117	0.10082					18	14	2	0	0	0	0.4196	1	5290	5290		21.702	4.3374	1	117870	+		10076	28419	7093	7101	11548	11548					-0.006992599507611885
GAGCGGAV	8	Unmodified	_GAGCGGAV_					0	0	0		ENST00000486946.1_1_7:150816287-150817669:+|nuORF	ENST00000486946.1_1_7:150816287-150817669:+|nuORF	ENST00000486946.1_1_7:150816287-150817669:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	591.2568359375	1	591.255522	590.248246	0.78488	0.00046407	0.64539	0.00038159	1.4303	0.00084566	591.2564880517034	62.724	1.8781	62.838	62.145	64.024	0.11389					180	93	3	0	0	0	0.80127	1	5516	5516		16.705	0	1	409430			10077	12593	7094	7102	11549	11549					-0.06326864265315635
GAGGAGFP	8	Unmodified	_GAGGAGFP_					0	0	0			REV__ENST00000479098.1_1_2:74725900-74726092:-|nuORF	REV__ENST00000479098.1_1_2:74725900-74726092:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.296142578125	1	633.299101	632.291825	-0.34024	-0.00021547	-3.6373	-0.0023035	-3.9775	-0.0025189	633.2967197493147	63.862	2.6331	63.889	62.845	65.478	0.027138					144	98	2	0	0	0	0.80127	2	6091	6079;6091		16.705	0	1	219330	+		10078	27394	7095	7103	11550;11551	11551					-0.03902931496531892
GAGGDGLARPE	11	Unmodified	_GAGGDGLARPE_					0	0	0		ENSG00000166897|ENST00000402918|ELFN2	ENSG00000166897|ENST00000402918|ELFN2	ENSG00000166897|ENST00000402918|ELFN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.246826171875	2	500.246338	998.478122	-0.69161	-0.00034597	0.58038	0.00029033	-0.11123	-5.5641E-05	500.2465024862851	28.806	0.53036	28.786	28.523	29.053	-0.019407					28	16	2	0	0	0	0.67778	1	1402	1402		35.152	0	1	68410			10079	6243	7096	7104	11552	11552					-0.021177791186801187
GAGGFAGP	8	Unmodified	_GAGGFAGP_					0	0	0			REV__ENST00000358747.10_2_3:48670939-48671086:-|nuORF	REV__ENST00000358747.10_2_3:48670939-48671086:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.8104248046875	1	633.299101	632.291825	-0.34024	-0.00021547	-3.6373	-0.0023035	-3.9775	-0.0025189	633.2967197493147	63.862	2.6331	63.889	62.845	65.478	0.027138					144	98	2	0	0	0	0.4196	1	6043	6043		10.185	5.0979	1	219330	+		10080	25444	7097	7105	11553	11553					-0.03902931496520523
GAGGGAGA	8	Unmodified	_GAGGGAGA_					0	0	0			REV__ENSG00000104967|ENST00000263257|NOVA2	REV__ENSG00000104967|ENST00000263257|NOVA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.793701171875	1	517.236501	516.229225	-1.5588	-0.00080627	3.5156	0.0018184	1.9568	0.0010121	517.2397192492645	88.523	0.28722	88.695	88.538	88.825	0.17233					8	6	2	0	0	0	0.4196	1	8731	8731		10.185	0	1	15530	+		10081	17494	7098	7106	11554	11554					-0.04824077564705931
GAGGGLGV	8	Unmodified	_GAGGGLGV_					0	0	0		ENST00000588559.5_1_19:55705613-55720813:-|nuORF;nc|ENSG00000080031|Q9HD43-3|PTPRH;nc|ENSG00000080031|Q9HD43-2|PTPRH;ENSG00000080031|ENST00000376350|PTPRH	ENST00000588559.5_1_19:55705613-55720813:-|nuORF	ENST00000588559.5_1_19:55705613-55720813:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	587.3317260742188	1	587.314751	586.307475	-0.72929	-0.00042832	-1.9491	-0.0011447	-2.6784	-0.001573	587.3135186456923	70.878	0.58582	70.878	70.549	71.135	0					54	32	2	0	0	0	0.4196	1	6333	6333		10.185	0	1	330600			10082	1433	7099	7107	11555	11555					-0.002226449794875407
GAGGGLGV	8	Unmodified	_GAGGGLGV_					0	0	0		ENST00000588559.5_1_19:55705613-55720813:-|nuORF;nc|ENSG00000080031|Q9HD43-3|PTPRH;nc|ENSG00000080031|Q9HD43-2|PTPRH;ENSG00000080031|ENST00000376350|PTPRH	ENST00000588559.5_1_19:55705613-55720813:-|nuORF	ENST00000588559.5_1_19:55705613-55720813:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	587.3271484375	1	587.314751	586.307475	-0.71433	-0.00041953	-1.536	-0.00090213	-2.2504	-0.0013217	587.3137022258846	70.565	0.56469	70.636	70.405	70.97	0.071037					43	27	2	0	0	0	0.4196	1	6365	6365		5.0869	0	1	328360			10083	1433	7099	7107	11556	11556					-0.002226449794875407
GAGGLCLEEVL	11	Unmodified	_GAGGLCLEEVL_					0	0	0			REV__ENST00000412485.1_1_X:13285044-13285287:-|nuORF	REV__ENST00000412485.1_1_X:13285044-13285287:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2861328125	2	530.7708	1059.52705	1.1033	0.00058562	-0.13025	-6.9132E-05	0.97308	0.00051649	531.2731535910928	23.221	0.2425	22.802	22.649	22.891	-0.41879					7	5	2	0	0	0	0.17404	1	1017	1017		14.865	0	1	42012	+		10084	26382	7100	7108	11557	11557					-0.0003362687393746455
GAGGPARCH	9	Unmodified	_GAGGPARCH_					0	0	0		ENST00000565348.5_1_16:30484158-30495228:+|nuORF	ENST00000565348.5_1_16:30484158-30495228:+|nuORF	ENST00000565348.5_1_16:30484158-30495228:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.19390869140625	2	413.192854	824.371155	0.80605	0.00033306	0.72513	0.00029962	1.5312	0.00063267	413.1932379055747	78.047	2.9824	78.452	77.977	80.959	0.4053					181	70	5	0	0	0	0.7932	1	8966	8966		26.796	5.0938	1	5554900			10085	13910	7101	7109	11558	11558					-0.04805607814034829
GAGKGGKG	8	Unmodified	_GAGKGGKG_					0	0	0			REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	631.3536987304688	1	631.3522	630.344923	-0.51031	-0.00032219	2.9318	0.001851	2.4215	0.0015288	631.3538475037058	69.941	0.75414	69.941	69.586	70.34	0					59	39	2	0	0	0	0.86906	1	6225	6225		8.2313	0.54101	1	1147600	+		10086	24890	7102	7110	11559	11559					0.01496446286137143
GAGKGGKG	8	Unmodified	_GAGKGGKG_					0	0	0			REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		1	631.3522	630.344923	-0.51031	-0.00032219	2.9318	0.001851	2.4215	0.0015288	631.3538475037058	69.941	0.75414	69.941	69.586	70.34	0	0.11196	0.00039209	NaN	8.2313	59	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1147600	+		10087	24890	7102	7110							0.01496446286137143
GAGKGGKG	8	Unmodified	_GAGKGGKG_					0	0	0			REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		1	631.3522	630.344923	-0.71035	-0.00044848	3.242	0.0020469	2.5317	0.0015984	631.3542391078367	69.685	1.2709	69.648	68.968	70.239	-0.036964	-0.18081	0.00058795	NaN	8.2313	85	65	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1167600	+		10088	24890	7102	7110							0.01496446286137143
GAGKGGKG	8	Unmodified	_GAGKGGKG_					0	0	0			REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		1	631.3522	630.344923	-0.086366	-5.4528E-05	2.1744	0.0013728	2.088	0.0013183	631.3533908345339	69.587	0.87682	69.623	69.256	70.133	0.035622	-0.20593	-8.6129E-05	NaN	8.2313	61	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1042000	+		10089	24890	7102	7110							0.01496446286137143
GAGKGGKG	8	Unmodified	_GAGKGGKG_					0	0	0			REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		1	631.3522	630.344923	1.3881	0.00087637	0.93985	0.00059338	2.3279	0.0014698	631.352657061356	69.665	1.2874	69.8	69.256	70.543	0.13506	-0.029044	-0.00086553	NaN	8.2313	85	63	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1147800	+		10090	24890	7102	7110							0.01496446286137143
GAGKGGKG	8	Unmodified	_GAGKGGKG_					0	0	0			REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		1	631.3522	630.344923	0.65014	0.00041047	1.9678	0.0012424	2.6179	0.0016528	631.3534006714528	69.613	1.2344	69.742	69.261	70.496	0.1291	-0.086844	-0.00021654	NaN	8.2313	82	60	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1060200	+		10091	24890	7102	7110							0.01496446286137143
GAGKGGKG	8	Unmodified	_GAGKGGKG_					0	0	0			REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		1	631.3522	630.344923	-0.54147	-0.00034186	2.5527	0.0016117	2.0113	0.0012698	631.3537896036685	69.829	1.1574	69.9	69.314	70.471	0.071037	0.071162	0.00015277	NaN	8.2313	82	56	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	935910	+		10092	24890	7102	7110							0.01496446286137143
GAGKGGKG	8	Unmodified	_GAGKGGKG_					0	0	0			REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		1	631.3522	630.344923	0.21796	0.00013761	2.764	0.001745	2.9819	0.0018826	631.3539070936264	69.605	0.53469	69.989	69.606	70.14	0.38416	0.16017	0.00028613	NaN	8.2313	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	597930	+		10093	24890	7102	7110							0.01496446286137143
GAGKGGKG	8	Unmodified	_GAGKGGKG_					0	0	0			REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	REV__ENST00000310512.3_1_7:100027461-100027629:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		1	631.3522	630.344923	0.75693	0.00047789	2.5683	0.0016215	3.3252	0.0020994	631.3538237711806	69.441	0.72903	69.988	69.577	70.306	0.54693	0.15934	0.00016258	NaN	8.2313	27	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	747580	+		10094	24890	7102	7110							0.01496446286137143
GAGPRLHDL	9	Unmodified	_GAGPRLHDL_					0	0	0			REV__AluSz_dup102163|chr22:37886915-37887229:-|3.0737850619653115|0.0002179491274605|13.78|63.0|12|3|sense	REV__AluSz_dup102163|chr22:37886915-37887229:-|3.0737850619653115|0.0002179491274605|13.78|63.0|12|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.25567626953125	2	468.256508	934.498464	-0.11516	-5.3922E-05	-3.5335	-0.0016546	-3.6487	-0.0017085	468.25473552954975	82.299	3.2758	82.365	81.1	84.376	0.06591					140	75	2	0	0	0	0.74721	1	8042	8042		37.159	5.2042	1	190410	+		10095	15398	7103	7111	11560	11560					0.0285943633180068
GAGSAAAH	8	Unmodified	_GAGSAAAH_					0	0	0		nc|ENSG00000141448|Q92908-2|GATA6;ENSG00000141448|ENST00000269216|GATA6	REV__ENSG00000143067|ENST00000421812|ZNF697	REV__ENSG00000143067|ENST00000421812|ZNF697	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.3164672851562	1	641.300164	640.292888	-0.22834	-0.00014643	-1.8479	-0.0011851	-2.0762	-0.0013315	641.2990241250109	61.774	0.69178	61.79	61.594	62.286	0.015724					48	27	2	0	0	0	0.4196	1	5411	5411		12.959	0	1	303300			10096	19768	7104	7112	11561	11561					-0.04164717127628137
GAGSTVHTH	9	Unmodified	_GAGSTVHTH_					0	0	0			REV__ENST00000520316.5_1_8:28627126-28633440:-|nuORF	REV__ENST00000520316.5_1_8:28627126-28633440:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.70941162109375	2	433.709391	865.404229	0.5343	0.00023173	-0.18636	-8.0824E-05	0.34795	0.00015091	433.70913386573756	19.147	1.0323	18.677	18.365	19.397	-0.46967					46	22	3	0	0	0	0.69914	1	489	489		40.573	0	1	348870	+		10097	28099	7105	7113	11562	11562					-0.03385702490345466
GAGVRKPK	8	Unmodified	_GAGVRKPK_					0	0	0			REV__ENST00000443199.6_1_17:73623504-73629591:-|nuORF	REV__ENST00000443199.6_1_17:73623504-73629591:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2586364746094	2	406.758687	811.502821	1.6647	0.00067714	-1.3129	-0.00053404	0.3518	0.0001431	406.75816089350496	57.633	0.31341	57.667	57.456	57.769	0.033905					12	9	2	0	0	0	0.4196	1	5245	5245		12.959	9.5492	1	39273	+		10098	17713	7106	7114	11563	11563					0.08952945545365765
GAHEGPALEP	10	Unmodified	_GAHEGPALEP_					0	0	0		ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3;ENST00000545453.5_2_13:73355107-73355970:-|nuORF	ENSG00000083520|ENST00000377767|DIS3	ENSG00000083520|ENST00000377767|DIS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.236572265625	2	489.237981	976.461409	-0.084851	-4.1512E-05	-2.5411	-0.0012432	-2.626	-0.0012847	489.23659515743003	63.847	1.1575	63.846	63.508	64.665	-0.00078583					92	41	3	0	0	0	0.86718	1	5942	5942		27.882	3.3631	1	760060			10099	1501	7107	7115	11564	11564					-0.027762800046389202
GAIRSHGLV	9	Unmodified	_GAIRSHGLV_					0	0	0			REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.2486877441406	2	455.266876	908.519199	-0.072158	-3.2851E-05	-1.9421	-0.00088418	-2.0143	-0.00091703	455.26578899468933	53.932	0.363	53.927	53.807	54.17	-0.0053711					12	9	2	0	0	0	0.20789	1	4747	4747		20.947	14.211	1	41452	+		10100	22616	7108	7116	11565	11565					0.06128026711473922
GAIRSHGLV	9	Unmodified	_GAIRSHGLV_					0	0	0			REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	455.266876	908.519199	-0.54716	-0.0002491	-1.0669	-0.00048573	-1.6141	-0.00073483	455.2663284640559	53.894	0.32454	53.832	53.565	53.89	-0.062065	-0.095488	0.00015648	NaN	20.947	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59863	+		10101	22616	7108	7116							0.06128026711473922
GAKFALFQ	8	Unmodified	_GAKFALFQ_					0	0	0		ENSG00000163959|ENST00000296327|SLC51A	ENSG00000163959|ENST00000296327|SLC51A	ENSG00000163959|ENST00000296327|SLC51A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.2458801269531	2	441.247621	880.480688	0.22352	9.8628E-05	-4.3868	-0.0019357	-4.1633	-0.001837	441.2455323431299	23.25	0.66378	22.831	22.544	23.207	-0.41879					34	15	3	0	0	0	0.87922	1	1022	1022		31.955	5.1588	1	217780			10102	5894	7109	7117	11566	11566					0.035667210769588564
GAKLLVVL	8	Unmodified	_GAKLLVVL_					0	0	0			REV__nc|ENSG00000284797|A0A2R8Y7Y5|CIST1	REV__nc|ENSG00000284797|A0A2R8Y7Y5|CIST1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7845153808594	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.82464	1	1671	1671		21.702	1.2205	1	1756100	+		10103	30280	7110	7118	11567	11567					0.13981055150509292
GAKLLVVL	8	Unmodified	_GAKLLVVL_					0	0	0			REV__nc|ENSG00000284797|A0A2R8Y7Y5|CIST1	REV__nc|ENSG00000284797|A0A2R8Y7Y5|CIST1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78515625	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.80963	1	1387	1387		15.636	0.97212	1	1817700	+		10104	30280	7110	7118	11568	11568					0.13981055150509292
GAKLMELVLPK	11	Unmodified	_GAKLMELVLPK_					0	0	0			REV__ENSG00000090971|ENST00000205194|NAT14	REV__ENSG00000090971|ENST00000205194|NAT14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.24371337890625	3	400.245782	1197.71552	-0.2197	-8.7935E-05	-4.405	-0.0017631	-4.6247	-0.001851	400.24390911644275	21.909	1.0061	21.29	20.897	21.903	-0.61827					56	25	4	0	0	0	0.67041	1	832	832		36.318	5.7488	1	396840	+		10105	17000	7111	7119	11569	11569					0.12456650770309352
GAKLMELVLPK	11	Unmodified	_GAKLMELVLPK_					0	0	0			REV__ENSG00000090971|ENST00000205194|NAT14	REV__ENSG00000090971|ENST00000205194|NAT14	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	400.245782	1197.71552	-0.2197	-8.7935E-05	-4.405	-0.0017631	-4.6247	-0.001851	400.24390911644275	21.909	1.0061	21.29	20.897	21.903	-0.61827	0.047741	0.0014673	NaN	36.318	56	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	396840	+		10106	17000	7111	7119							0.12456650770309352
GAKNKVKAN	9	Unmodified	_GAKNKVKAN_					0	0	0		ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.2799377441406	2	465.279983	928.545414	-0.11899	-5.5362E-05	0.19844	9.2329E-05	0.079452	3.6968E-05	465.2799248826243	89.079	2.3276	89.147	88.595	90.922	0.068161					120	54	4	0	0	0	0.78536	1	9043	9043		29.15	1.2673	1	1620100			10107	8055	7112	7120	11570	11570					0.07828295882939074
GAKSASLAPR	10	Unmodified	_GAKSASLAPR_					0	0	0		nc|ENSG00000162105|Q9UPX8-4|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;ENSG00000162105|ENST00000601538|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27801513671875	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.85981	1	10114	10114		35.152	3.1972	1	5642300			10108	5669	7113	7121	11571	11571					0.06031992020314192
GAKTKSLV	8	Unmodified	_GAKTKSLV_					0	0	0		ENSG00000175595|ENST00000311895|ERCC4;nc|ENSG00000175595|Q92889-2|ERCC4	ENSG00000175595|ENST00000311895|ERCC4	ENSG00000175595|ENST00000311895|ERCC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.251953125	2	402.252903	802.491253	-1.9385	-0.00077976	1.1499	0.00046257	-0.78852	-0.00031719	402.25323570415725	20.33	0.48855	20.374	20.211	20.699	0.043747					36	23	2	0	0	0	0.7961	1	493	493		17.365	0.66	1	238530			10109	7027	7114	7122	11572	11572					0.0821070373136763
GAKVVLPERLK	11	Unmodified	_GAKVVLPERLK_					0	0	0			REV__nc|ENSG00000163395|Q86VF2|IGFN1	REV__nc|ENSG00000163395|Q86VF2|IGFN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.3905029296875	2	605.387522	1208.76049	-0.1695	-0.00010262	4.0427	0.0024474	3.8732	0.0023448	605.389885541641	45.128	1.0384	45.108	44.704	45.742	-0.01984					44	23	2	0	0	0	0.75121	1	3579	3579		12.812	0	1	150490	+		10110	20911	7115	7123	11573	11573					0.16446217627890292
GALGQEVNAER	11	Unmodified	_GALGQEVNAER_					0	0	0			REV__nc|ENSG00000233718|P40205|MYCNOS	REV__nc|ENSG00000233718|P40205|MYCNOS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.846435546875	2	572.291276	1142.568	0.31508	0.00018032	-0.49674	-0.00028428	-0.18166	-0.00010396	572.2909528628074	17.224	0.45142	16.742	16.493	16.944	-0.48256					13	9	2	0	0	0	0.17382	1	211	211		28.081	9.8194	1	136740	+		10111	30223	7116	7124	11574	11574					0.0024185048989693314
GALGTRGTF	9	Unmodified	_GALGTRGTF_					0	0	0		nc|ENSG00000042832|P01266-2|TG;ENSG00000042832|ENST00000220616|TG	nc|ENSG00000042832|P01266-2|TG	nc|ENSG00000042832|P01266-2|TG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2381286621094	2	440.237784	878.461016	0.35302	0.00015541	-0.084134	-3.7039E-05	0.26889	0.00011837	440.237520875651	19.077	0.43112	18.448	18.28	18.711	-0.6296					14	9	2	0	0	0	0.78536	1	486	486		29.15	2.4566	1	60773			10112	939	7117	7125	11575	11575					0.01692345066192047
GALHPLPK	8	Unmodified	_GALHPLPK_					0	0	0		nc|ENSG00000139793|Q5VZF2-3|MBNL2;nc|ENSG00000139793|Q5VZF2-2|MBNL2;nc|ENSG00000139793|Q5VZF2|MBNL2;ENSG00000139793|ENST00000679496|MBNL2	nc|ENSG00000139793|Q5VZF2-3|MBNL2	nc|ENSG00000139793|Q5VZF2-3|MBNL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.8376159667969	2	416.755613	831.496673	-0.41471	-0.00017283	1.0451	0.00043553	0.63034	0.0002627	416.7559983774111	30.255	0.48677	30.283	30.008	30.495	0.028618					16	10	2	0	0	0	0.4196	1	1939	1939		26.796	0	1	26035			10113	4398	7118	7126	11576	11576					0.07418427313848497
GALHRTSK	8	Unmodified	_GALHRTSK_					0	0	0		ENST00000394480.6_1_15:88690622-88799253:-|nuORF	ENST00000394480.6_1_15:88690622-88799253:-|nuORF	ENST00000394480.6_1_15:88690622-88799253:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.28643798828125	2	435.251226	868.487899	0.73556	0.00032015	4.1284	0.0017969	4.864	0.0021171	435.25295173231024	49.263	0.8812	50.167	49.45	50.331	0.90424					33	21	2	0	0	0	0.4196	1	4815	4815		23.042	0	1	433990			10114	11069	7119	7127	11577	11577					0.04839453677379879
GALKPGRAV	9	Unmodified	_GALKPGRAV_					0	0	0		nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;nc|ENSG00000061987|Q7Z3U7-5|MON2;ENSG00000061987|ENST00000393630|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78009033203125	2	434.771794	867.529036	-0.17456	-7.5893E-05	-1.6217	-0.00070508	-1.7963	-0.00078097	434.77091183525386	38.369	0.12061	38.891	38.79	38.911	0.52235					4	2	2	0	0	0	0.20789	1	3158	3158		24.203	0	1	60135			10115	1080	7120	7128	11578	11578					0.08997214716839608
GALLCRVI	8	Unmodified	_GALLCRVI_					0	0	0		ENSG00000100739|ENST00000216629|BDKRB1	ENSG00000100739|ENST00000216629|BDKRB1	ENSG00000100739|ENST00000216629|BDKRB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.7557067871094	2	422.757298	843.500044	0.66355	0.00028052	-4.1172	-0.0017406	-3.4537	-0.0014601	422.7554517175375	57.439	1.3239	57.994	57.642	58.966	0.55512					58	32	3	0	0	0	0.86288	1	6015	6015		26.796	0	1	1986200			10116	1865	7121	7129	11579	11579					0.07203354096191106
GALLHIGPG	9	Unmodified	_GALLHIGPG_					0	0	0			REV__ENST00000486227.5_1_X:48673225-48673626:+|nuORF	REV__ENST00000486227.5_1_X:48673225-48673626:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.257080078125	2	417.745245	833.475937	1.0132	0.00042326	-0.24856	-0.00010384	0.76464	0.00031942	417.7450592116885	23.404	0.52822	22.83	22.436	22.965	-0.57415					14	12	2	0	0	0	0.20789	1	1031	1031		21.702	0	1	39682	+		10117	27543	7122	7130	11580	11580					0.05253836934195988
GALMLARI	8	Unmodified	_GALMLARI_					0	0	0			REV__ENSG00000164236|ENST00000296657|ANKRD33B	REV__ENSG00000164236|ENST00000296657|ANKRD33B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.7555847167969	2	422.757298	843.500044	0.66355	0.00028052	-4.1172	-0.0017406	-3.4537	-0.0014601	422.7554517175375	57.439	1.3239	57.994	57.642	58.966	0.55512					58	32	3	0	0	0	0.88915	1	6028	6028		35.201	1.6851	1	1986200	+		10118	21054	7123	7131	11581	11581					0.07203354096191106
GALMRSLQ	8	Unmodified	_GALMRSLQ_					0	0	0			REV__ENST00000428284.2_1_7:27168486-27168678:-|nuORF	REV__ENST00000428284.2_1_7:27168486-27168678:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2447509765625	2	438.242012	874.469472	0.65561	0.00028732	3.5416	0.0015521	4.1972	0.0018394	438.2433791659041	51.77	0.52613	52.437	52.189	52.715	0.66729					24	12	3	0	0	0	0.41376	1	5189	5189		79.939	11.152	1	848310	+		10119	26581	7124	7132	11582	11582					0.027215757111662242
GALPLLVVLP	10	Unmodified	_GALPLLVVLP_					0	0	0			REV__nc|ENSG00000169174|Q8NBP7-2|PCSK9	REV__nc|ENSG00000169174|Q8NBP7-2|PCSK9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.8323974609375	2	496.331153	990.647754	-1.3548	-0.00067244	4.1362	0.0020529	2.7813	0.0013805	496.3331234696485	60.849	0.87923	60.849	60.216	61.095	0					55	36	2	0	0	0	0.87636	1	5340	5340		12.959	0	1	67017	+		10120	21556	7125	7133	11583	11583					0.15205568901853894
GALRLQLR	8	Unmodified	_GALRLQLR_					0	0	0		nc|ENSG00000130479|Q66K74-2|MAP1S;ENSG00000130479|ENST00000324096|MAP1S	nc|ENSG00000130479|Q66K74-2|MAP1S	nc|ENSG00000130479|Q66K74-2|MAP1S	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.80029296875	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.87479	1	3468	3468		30.504	4.9296	1	1570500			10121	3647	7126	7134	11584	11584					0.1163659249950797
GALRPQAGAS	10	Unmodified	_GALRPQAGAS_					0	0	0		nc|ENSG00000231028|P0C7V0|AHI1-DT	nc|ENSG00000231028|P0C7V0|AHI1-DT	nc|ENSG00000231028|P0C7V0|AHI1-DT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2539367675781	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.76096	1	8572	8572		41.427	2.4051	1	1449300			10122	15270	7127	7135	11585	11585					0.027191324691784757
GALVTKRCAR	10	Unmodified	_GALVTKRCAR_					0	0	0		ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	537.8618774414062	2	537.813667	1073.61278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.444	1	15.419	14.919	15.919	-0.024207								0	0	0	0.45132	1	34	34		27.882	1.1893	1				10123	7959	7128	7136	11586	11586					0.07892002822222821
GAMVIFFDL	9	Unmodified	_GAMVIFFDL_					0	0	0			REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I	REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7478332519531	2	506.762246	1011.50994	0.37941	0.00019227	-2.5329	-0.0012836	-2.1535	-0.0010913	506.7623821079294	54.522	0.12623	54.928	54.822	54.948	0.40663					4	2	2	0	0	0	0.20789	1	5539	5539		47.916	29.591	1	63446	+		10124	17176	7129	7137	11587	11587					0.00464497310929346
GANILKKE	8	Unmodified	_GANILKKE_					0	0	0		ENSG00000203872|ENST00000388923|C6orf163	ENSG00000203872|ENST00000388923|C6orf163	ENSG00000203872|ENST00000388923|C6orf163	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26434326171875	2	436.763635	871.512717	0.46701	0.00020397	0.17357	7.581E-05	0.64058	0.00027978	436.7635183439704	26.23	1.3576	26.275	25.815	27.173	0.045509					57	40	2	0	0	0	0.90983	2	1120	1109;1120		44.117	3.59	1	139010			10125	8398	7130	7138	11588;11589	11589					0.071820887600893
GANKKNGKP	9	Unmodified	_GANKKNGKP_					0	0	0			REV__ENST00000557054.1_1_14:20923524-20925664:+|nuORF	REV__ENST00000557054.1_1_14:20923524-20925664:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.26397705078125	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.76764	1	8172	8172		34.173	3.6689	1	4814400	+		10126	28711	7131	7139	11590	11590					0.05435722848858404
GANLKRKS	8	Unmodified	_GANLKRKS_					0	0	0		ENST00000529581.5_1_11:85429867-85430118:-|nuORF	ENST00000529581.5_1_11:85429867-85430118:-|nuORF	ENST00000529581.5_1_11:85429867-85430118:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2579345703125	2	437.266876	872.519199	-1.6155	-0.00070641	-1.0857	-0.00047474	-2.7012	-0.0011812	437.26621269412277	29.823	0.7162	29.89	29.511	30.228	0.066727					43	30	2	0	0	0	0.4196	1	1297	1297		5.9211	0	1	61784			10127	13328	7132	7140	11591	11591					0.0778402671146523
GAPAGAARRGR	11	Unmodified	_GAPAGAARRGR_					0	0	0			REV__ENST00000307534.8_1_10:91404755-91405043:-|nuORF	REV__ENST00000307534.8_1_10:91404755-91405043:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.2484130859375	2	520.29703	1038.57951	0.027886	1.4509E-05	-4.2959	-0.0022351	-4.268	-0.0022206	520.2948782207887	74.363	0.8254	74.922	74.499	75.324	0.55891					38	19	3	0	0	0	0.17404	1	8355	8355		44.117	3.5442	1	217020	+		10128	24845	7133	7141	11592	11592					0.06176137094553269
GAPGLASFQ	9	Unmodified	_GAPGLASFQ_					0	0	0			REV__ENST00000423686.1_1_13:52763972-52768469:-|nuORF	REV__ENST00000423686.1_1_13:52763972-52768469:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.2184143066406	2	424.21906	846.423567	-0.1837	-7.7928E-05	-1.1351	-0.00048152	-1.3188	-0.00055944	424.2185287134354	101.66	1.8082	101.68	101.04	102.85	0.01989					87	43	4	0	0	0	0.78983	1	10841	10841		27.882	1.1893	1	1878300	+		10129	26511	7134	7142	11593	11593					-0.005787461994259502
GAPGRVRV	8	Unmodified	_GAPGRVRV_					0	0	0			REV__nc|ENSG00000069424|Q13303-5|KCNAB2	REV__nc|ENSG00000069424|Q13303-5|KCNAB2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24822998046875	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.26	1	115.23	114.73	115.73	-0.02433								0	0	0	0.29498	1	12768	12768		26.796	5.0938	1		+		10130	29706	7135	7143	11594	11594					0.06959774885558545
GAPLAPHRDAF	11	Unmodified	_GAPLAPHRDAF_					0	0	0		ENST00000584528.5_1_17:56603677-56604185:-|nuORF	ENST00000584528.5_1_17:56603677-56604185:-|nuORF	ENST00000584528.5_1_17:56603677-56604185:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.7973022460938	2	576.301447	1150.58834	-0.58544	-0.00033739	-1.9823	-0.0011424	-2.5677	-0.0014798	576.8016818558231	77.182	1.0318	77.751	77.308	78.34	0.56836					72	25	4	0	0	0	0.32928	1	8756	8756		67.494	14.142	1	705710			10131	14134	7136	7144	11595	11595					0.019070659403496393
GAPLRAACL	9	Unmodified	_GAPLRAACL_					0	0	0			REV__ENST00000240123.11_2_8:22432693-22432984:+|nuORF	REV__ENST00000240123.11_2_8:22432693-22432984:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.7737121582031	2	436.244555	870.474557	-0.83863	-0.00036585	0.63478	0.00027692	-0.20384	-8.8925E-05	436.24464207442594	28.004	0.13348	27.907	27.84	27.974	-0.096947					4	2	2	0	0	0	0.20789	1	1661	1661		12.207	0	1	29457	+		10132	24224	7137	7145	11596	11596					0.034138795737590044
GAPLRAACL	9	Unmodified	_GAPLRAACL_					0	0	0			REV__ENST00000240123.11_2_8:22432693-22432984:+|nuORF	REV__ENST00000240123.11_2_8:22432693-22432984:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	436.244555	870.474557	0.075341	3.2867E-05	2.6844	0.0011711	2.7598	0.0012039	436.24464579042586	27.415	0.12551	27.526	27.41	27.535	0.11117	-0.13552	0.0007953	NaN	12.207	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19904	+		10133	24224	7137	7145							0.034138795737590044
GAPPNDPRRIV	11	Unmodified	_GAPPNDPRRIV_					0	0	0			REV__ENST00000572218.5_2_17:44109587-44110490:-|nuORF	REV__ENST00000572218.5_2_17:44109587-44110490:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.332763671875	2	596.333279	1190.652	-0.50602	-0.00030176	-0.30093	-0.00017945	-0.80695	-0.00048121	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.70737	1	10211	10211		30.318	3.2704	1	1259900	+		10134	28943	7138	7146	11597	11597					0.06430426377460208
GAPQHDSP	8	Unmodified	_GAPQHDSP_					0	0	0		ENST00000597346.1_1_11:2720561-2721134:-|nuORF	ENST00000597346.1_1_11:2720561-2721134:-|nuORF	ENST00000597346.1_1_11:2720561-2721134:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.9231872558594	2	404.682842	807.351131	2.7947	0.001131	-2.2024	-0.00089125	0.59239	0.00023973	404.68178745291783	26.224	0.24885	26.191	26.057	26.306	-0.032125					6	5	2	0	0	0	0.4196	1	1113	1113		8.2313	1.0379	1	5834.1			10135	14352	7139	7147	11598	11598					-0.06025080273002459
GAPSLLNPH	9	Unmodified	_GAPSLLNPH_					0	0	0			REV__ENST00000265678.8_1_6:166825090-166825723:-|nuORF	REV__ENST00000265678.8_1_6:166825090-166825723:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.76837158203125	2	453.245609	904.476666	-1.7331	-0.00078554	0.91612	0.00041523	-0.81703	-0.00037031	453.24587154151897	30.15	0.66216	30.178	29.876	30.538	0.028618					17	14	2	0	0	0	0.20789	1	1915	1915		25.45	0	1	49428	+		10136	24496	7140	7148	11599	11599					0.02060631583231043
GAPSPCRH	8	Unmodified	_GAPSPCRH_					0	0	0			REV__ENST00000270066.10_1_19:44235636-44235714:-|nuORF	REV__ENST00000270066.10_1_19:44235636-44235714:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.1755065917969	2	412.695229	823.375906	2.121	0.00087533	-0.55282	-0.00022815	1.5682	0.00064718	412.6953911808752	94.908	0.11726	95.341	95.283	95.4	0.4324					4	2	2	0	0	0	0.4196	1	11332	11332		42.474	0	1	121590	+		10137	24529	7141	7149	11600	11600					-0.04284723671264601
GAPSQCQAGTP	11	Unmodified	_GAPSQCQAGTP_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;ENSG00000166833|ENST00000349880|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.7252502441406	2	508.726923	1015.43929	0.1939	9.8643E-05	-3.3173	-0.0016876	-3.1234	-0.001589	508.72501975292585	31.802	0.7764	31.816	31.468	32.244	0.01366					40	20	3	0	0	0	0.65746	1	1753	1753		37.812	0.65241	1	172220			10138	15072	7142	7150	11601	11601					-0.06780827744694307
GAPTTLSSLF	10	Unmodified	_GAPTTLSSLF_					0	0	0			REV__ENSG00000166963|ENST00000300231|MAP1A	REV__ENSG00000166963|ENST00000300231|MAP1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.2664489746094	2	497.266207	992.517862	-1.0651	-0.00052965	1.9323	0.00096086	0.86716	0.00043121	497.2669260284884	27.702	0.91206	27.605	27.272	28.184	-0.096947					46	20	4	0	0	0	0.84112	1	1645	1645		37.159	0	1	425880	+		10139	21346	7143	7151	11602	11602					0.021303478320646718
GAPVFKLF	8	Unmodified	_GAPVFKLF_					0	0	0			REV__nc|ENSG00000175054|Q13535-2|ATR	REV__nc|ENSG00000175054|Q13535-2|ATR	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	439.7682189941406	2	439.760364	877.506175	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.262	1	62.37	61.87	62.87	0.10743								0	0	0	0.30674	1	5425	5425		15.636	0.97212	1		+		10140	22035	7144	7152	11603	11603					0.06252195599381594
GAPVGHPPK	9	Unmodified	_GAPVGHPPK_					0	0	0			REV__ENST00000607286.5_1_5:476364-477927:+|nuORF	REV__ENST00000607286.5_1_5:476364-477927:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.23370361328125	2	430.24287	858.471186	1.4811	0.00063723	-1.5612	-0.00067169	-0.080108	-3.4466E-05	430.2421016737621	23.717	0.63511	23.143	22.92	23.555	-0.57415					25	14	2	0	0	0	0.20789	1	1114	1114		16.473	0	1	101410	+		10141	29385	7145	7153	11604	11604					0.036289527914163955
GAQNTHLA	8	Unmodified	_GAQNTHLA_					0	0	0		ENST00000507669.5_1_3:131220538-131221665:-|nuORF	ENST00000507669.5_1_3:131220538-131221665:-|nuORF	ENST00000507669.5_1_3:131220538-131221665:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2065734863281	2	406.206484	810.398415	0.41441	0.00016834	0.23601	9.587E-05	0.65042	0.00026421	406.2065018547303	28.048	0.60811	27.951	27.576	28.184	-0.096947					19	13	2	0	0	0	0.87922	1	1664	1664		31.955	0	1	154750			10142	12961	7146	7154	11605	11605					-0.014368010020120892
GAQRGWPNKP	10	Unmodified	_GAQRGWPNKP_					0	0	0			REV__ENST00000307790.7_3_22:30184749-30184881:-|nuORF	REV__ENST00000307790.7_3_22:30184749-30184881:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.7942504882812	2	555.793789	1109.57303	-1.526	-0.00084811	0.035054	1.9483E-05	-1.4909	-0.00082863	555.7937267281211	27.516	0.47497	27.516	27.327	27.802	0					29	19	2	0	0	0	0.86718	1	1103	1103		27.882	0	1	43832	+		10143	24852	7147	7155	11606	11606					0.02262199143183352
GARAAPLVP	9	Unmodified	_GARAAPLVP_					0	0	0		nc|ENSG00000178928|Q8N7U7-2|TPRX1;nc|ENSG00000178928|Q8N7U7|TPRX1;ENSG00000178928|ENST00000698655|TPRX1;nc|ENSG00000259009|P0DV77|TPRX2	nc|ENSG00000178928|Q8N7U7-2|TPRX1	nc|ENSG00000178928|Q8N7U7-2|TPRX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.25738525390625	2	426.25852	850.502486	1.3789	0.00058776	-4.4892	-0.0019136	-3.1103	-0.0013258	426.25665824174644	34.41	1.453	34.715	33.953	35.406	0.30494					83	35	4	0	0	0	0.5393	1	2571	2571		50.025	3.2581	1	1776900			10144	7232	7148	7156	11607	11607					0.07125525825517798
GARAAPLVP	9	Unmodified	_GARAAPLVP_					0	0	0		nc|ENSG00000178928|Q8N7U7-2|TPRX1;nc|ENSG00000178928|Q8N7U7|TPRX1;ENSG00000178928|ENST00000698655|TPRX1;nc|ENSG00000259009|P0DV77|TPRX2	nc|ENSG00000178928|Q8N7U7-2|TPRX1	nc|ENSG00000178928|Q8N7U7-2|TPRX1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	426.25852	850.502486	-1.9508	-0.00083155	-0.75618	-0.00032233	-2.707	-0.0011539	426.2580447154146	35.244	1.572	35.244	34.654	36.226	0	0.35899	0.0010723	NaN	50.025	62	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113560			10145	7232	7148	7156							0.07125525825517798
GARAAPLVP	9	Unmodified	_GARAAPLVP_					0	0	0		nc|ENSG00000178928|Q8N7U7-2|TPRX1;nc|ENSG00000178928|Q8N7U7|TPRX1;ENSG00000178928|ENST00000698655|TPRX1;nc|ENSG00000259009|P0DV77|TPRX2	nc|ENSG00000178928|Q8N7U7-2|TPRX1	nc|ENSG00000178928|Q8N7U7-2|TPRX1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	426.25852	850.502486	-1.8001	-0.0007673	-0.75709	-0.00032271	-2.5572	-0.00109	426.25810203134205	34.976	1.2629	35.015	34.397	35.66	0.038643	0.1295	0.0010716	NaN	50.025	62	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85504			10146	7232	7148	7156							0.07125525825517798
GARAAPLVP	9	Unmodified	_GARAAPLVP_					0	0	0		nc|ENSG00000178928|Q8N7U7-2|TPRX1;nc|ENSG00000178928|Q8N7U7|TPRX1;ENSG00000178928|ENST00000698655|TPRX1;nc|ENSG00000259009|P0DV77|TPRX2	nc|ENSG00000178928|Q8N7U7-2|TPRX1	nc|ENSG00000178928|Q8N7U7-2|TPRX1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	426.25852	850.502486	0.13866	5.9105E-05	-3.0133	-0.0012844	-2.8746	-0.0012253	426.25712670044015	34.746	0.95203	34.852	34.362	35.314	0.10604	-0.033178	-0.0008519	NaN	50.025	64	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	154780			10147	7232	7148	7156							0.07125525825517798
GARAAPLVP	9	Unmodified	_GARAAPLVP_					0	0	0		nc|ENSG00000178928|Q8N7U7-2|TPRX1;nc|ENSG00000178928|Q8N7U7|TPRX1;ENSG00000178928|ENST00000698655|TPRX1;nc|ENSG00000259009|P0DV77|TPRX2	nc|ENSG00000178928|Q8N7U7-2|TPRX1	nc|ENSG00000178928|Q8N7U7-2|TPRX1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	426.25852	850.502486	0.03069	1.3082E-05	-1.9411	-0.0008274	-1.9104	-0.00081432	426.2572123843954	34.914	0.84513	34.859	34.324	35.169	-0.055149	-0.026637	6.2178E-05	NaN	50.025	64	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129820			10148	7232	7148	7156							0.07125525825517798
GARAPRPRLEQ	11	Unmodified	_GARAPRPRLEQ_					0	0	0			REV__ENST00000461997.5_1_12:2986378-2997084:+|nuORF	REV__ENST00000461997.5_1_12:2986378-2997084:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.5757751464844	3	417.57406	1249.70035	1.3349	0.00055741	2.1698	0.00090603	3.5046	0.0014634	417.5749239051732	21.566	1.4264	21.123	20.825	22.251	-0.44324					86	32	4	0	0	0	0.67778	1	771	771		37.6	3.6783	1	1107100	+		10149	27041	7149	7157	11608	11608					0.0854892001736971
GARARRRDLGS	11	Unmodified	_GARARRRDLGS_					0	0	0		ENST00000296930.9_1_5:170814684-170814831:+|nuORF	ENST00000296930.9_1_5:170814684-170814831:+|nuORF	ENST00000296930.9_1_5:170814684-170814831:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.56488037109375	3	405.565676	1213.6752	0.36519	0.00014811	-2.6298	-0.0010666	-2.2646	-0.00091846	405.56448085156467	59.925	1.6913	60.042	59.092	60.783	0.11676					133	55	3	0	0	0	0.74405	1	5123	5123		23.378	0	1	327870			10150	9752	7150	7158	11609	11609					0.0769086521479494
GARDRLWSY	9	Unmodified	_GARDRLWSY_					0	0	0			REV__nc|ENSG00000177943|Q6UXC1-3|MAMDC4	REV__nc|ENSG00000177943|Q6UXC1-3|MAMDC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.285888671875	2	562.285797	1122.55704	0.51987	0.00029231	0.89754	0.00050467	1.4174	0.00079699	562.2860653495065	63.228	0.96156	63.782	63.382	64.343	0.5545					53	22	3	0	0	0	0.76255	1	6798	6798		35.618	2.8059	1	538600	+		10151	22239	7151	7159	11610	11610					0.0006649290628502058
GARKPGGVV	9	Unmodified	_GARKPGGVV_					0	0	0			REV__ENST00000513965.5_1_3:128968531-128971678:+|nuORF	REV__ENST00000513965.5_1_3:128968531-128971678:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.75579833984375	2	420.756144	839.497735	-2.163	-0.00091008	-0.04622	-1.9447E-05	-2.2092	-0.00092953	420.7559301673431	20.73	1.3575	20.73	19.75	21.107	0					81	64	2	0	0	0	0.7932	1	480	480		18.324	2.6882	1	64367	+		10152	28001	7152	7160	11611	11611					0.0715664168276362
GARKWVLVF	9	Unmodified	_GARKWVLVF_					0	0	0			REV__ENST00000396444.7_2_15:50792808-50792907:+|nuORF	REV__ENST00000396444.7_2_15:50792808-50792907:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3264770507812	2	538.324194	1074.63383	1.8602	0.0010014	3.2273	0.0017374	5.0875	0.0027387	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.78058	1	12357	12357		30.504	1.3541	1	19391000	+		10153	26143	7153	7161	11612	11612					0.09950336193423936
GARLRRRCPLR	11	Unmodified	_GARLRRRCPLR_					0	0	0			REV__ENST00000443023.5_1_2:200323000-200323417:-|nuORF	REV__ENST00000443023.5_1_2:200323000-200323417:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.27752685546875	3	451.942201	1352.80477	-0.53385	-0.00024127	2.5663	0.0011598	2.0324	0.00091853	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.74771	1	4278	4278		22.562	5.3948	1	920720	+		10154	26774	7154	7162	11613	11613					0.14248343293093058
GARPCDPP	8	Unmodified	_GARPCDPP_					0	0	0			REV__ENST00000262494.12_3_16:56379319-56379799:+|nuORF	REV__ENST00000262494.12_3_16:56379319-56379799:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.6886901855469	2	406.689613	811.364672	-2.0484	-0.00083306	-1.6719	-0.00067993	-3.7202	-0.001513	406.6888430338814	28.541	0.52734	28.541	28.303	28.83	0					30	21	2	0	0	0	0.9159	1	1196	1196		44.531	2.0566	1	32190	+		10155	24422	7155	7163	11614	11614					-0.04855545765417446
GARPCDPP	8	Unmodified	_GARPCDPP_					0	0	0			REV__ENST00000262494.12_3_16:56379319-56379799:+|nuORF	REV__ENST00000262494.12_3_16:56379319-56379799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.68780517578125	2	406.689613	811.364672	-0.34816	-0.00014159	-3.8017	-0.0015461	-4.1498	-0.0016877	406.68825238333864	28.588	1.0784	28.548	28.208	29.286	-0.039907					55	34	2	0	0	0	0.9159	1	1461	1461		44.531	11.015	1	78040	+		10156	24422	7155	7163	11615	11615					-0.04855545765417446
GARPRVVN	8	Unmodified	_GARPRVVN_					0	0	0		ENSG00000105270|ENST00000360535|CLIP3	ENSG00000105270|ENST00000360535|CLIP3	ENSG00000105270|ENST00000360535|CLIP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7596740722656	2	434.759218	867.503883	1.0426	0.00045328	-1.4353	-0.00062401	-0.39271	-0.00017073	434.7588689622068	87.637	3.2918	87.563	86.012	89.304	-0.073997					167	77	4	0	0	0	0.87922	1	9071	9071		31.955	3.7006	1	1572200			10157	2197	7156	7164	11616	11616					0.06483159914284897
GARRAAPN	8	Unmodified	_GARRAAPN_					0	0	0			REV__ENST00000428449.5_1_7:121946144-121946204:+|nuORF	REV__ENST00000428449.5_1_7:121946144-121946204:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.72894287109375	2	406.727918	811.441283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.028	1	76.075	75.575	76.575	0.046448								0	0	0	0.29344	1	7418	7418		31.955	5.1588	1		+		10158	26583	7157	7165	11617	11617					0.02802013846076079
GARRAGRRVRP	11	Unmodified	_GARRAGRRVRP_					0	0	0		ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3909912109375	2	626.384503	1250.75445	1.3747	0.00086107	1.2884	0.00080704	2.6631	0.0016681	626.8868969487263	110.01	0.86485	110.13	109.81	110.68	0.12289					76	30	3	0	0	0	0.76699	1	11872	11872		18.262	0.89712	1	3484200			10159	9630	7158	7166	11618	11618					0.139105569595813
GARRRATR	8	Unmodified	_GARRRATR_					0	0	0		nc|ENSG00000063176|Q9NRA0-4|SPHK2;nc|ENSG00000063176|Q9NRA0-2|SPHK2;ENSG00000063176|ENST00000245222|SPHK2;nc|ENSG00000063176|Q9NRA0-5|SPHK2;nc|ENSG00000063176|Q9NRA0-3|SPHK2	nc|ENSG00000063176|Q9NRA0-4|SPHK2	nc|ENSG00000063176|Q9NRA0-4|SPHK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2876281738281	2	472.286466	942.558379	2.0257	0.00095671	0.51347	0.0002425	2.5392	0.0011992	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.8621	1	10240	10240		26.693	0	1	50843000			10160	1088	7159	7167	11619	11619					0.0848017178570899
GARRRGLVF	9	Unmodified	_GARRRGLVF_					0	0	0			REV__ENST00000435475.5_1_1:109419917-109420064:+|nuORF	REV__ENST00000435475.5_1_1:109419917-109420064:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3137817382812	2	516.314692	1030.61483	-0.2553	-0.00013181	-0.64468	-0.00033286	-0.89997	-0.00046467	516.3144185010789	103.22	1.1465	103.4	103.01	104.15	0.18298					74	28	3	0	0	0	0.7932	1	10918	10918		23.042	1.0826	1	978380	+		10161	26674	7160	7168	11620	11620					0.10074799622361752
GARRRGLVF	9	Unmodified	_GARRRGLVF_					0	0	0			REV__ENST00000435475.5_1_1:109419917-109420064:+|nuORF	REV__ENST00000435475.5_1_1:109419917-109420064:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3145141601562	2	516.314692	1030.61483	1.9037	0.0009829	-3.2283	-0.0016668	-1.3246	-0.0006839	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.72402	1	12017	12017		38.806	1.647	1	22616000	+		10162	26674	7160	7168	11621	11621					0.10074799622361752
GARRRGLVF	9	Unmodified	_GARRRGLVF_					0	0	0			REV__ENST00000435475.5_1_1:109419917-109420064:+|nuORF	REV__ENST00000435475.5_1_1:109419917-109420064:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3146362304688	2	516.314692	1030.61483	1.791	0.00092474	-3.1223	-0.0016121	-1.3312	-0.00068734	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.7932	1	12243	12243		24.203	0.68005	1	24820000	+		10163	26674	7160	7168	11622	11622					0.10074799622361752
GARVTAVPVSA	11	Unmodified	_GARVTAVPVSA_					0	0	0		ENSG00000196199|ENST00000361479|MPHOSPH8;nc|ENSG00000196199|Q99549-2|MPHOSPH8	ENSG00000196199|ENST00000361479|MPHOSPH8	ENSG00000196199|ENST00000361479|MPHOSPH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	514.2977294921875	2	514.298373	1026.58219	0.77641	0.0003993	-1.7386	-0.00089418	-0.96224	-0.00049488	514.2978580513103	96.313	2.149	96.476	95.152	97.301	0.16316					118	50	3	0	0	0	0.7144	1	9939	9939		29.17	2.4771	1	671130			10164	8025	7161	7169	11623	11623					0.0699654770885445
GASAKQPRV	9	Unmodified	_GASAKQPRV_					0	0	0			REV__ENST00000418244.5_1_1:63787501-63787690:-|nuORF	REV__ENST00000418244.5_1_1:63787501-63787690:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2632141113281	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.7932	1	7729	7729		25.574	1.07	1	4597500	+		10165	26455	7162	7170	11624	11624					0.05435722848858404
GASDALCLIR	10	Unmodified	_GASDALCLIR_					0	0	0			REV__ENST00000358600.7_1_19:14492235-14499295:+|nuORF	REV__ENST00000358600.7_1_19:14492235-14499295:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.77001953125	2	509.771134	1017.52771	0.87163	0.00044433	-1.3369	-0.00068153	-0.46531	-0.0002372	509.77049105890745	18.079	0.57489	17.457	17.101	17.676	-0.62141					25	13	2	0	0	0	0.76096	1	345	345		41.427	0.64845	1	119220	+		10166	25437	7163	7171	11625	11625					0.01965212565778529
GASETNYWY	9	Unmodified	_GASETNYWY_					0	0	0		ENST00000254940.9_1_16:69373578-69373746:+|nuORF	ENST00000254940.9_1_16:69373578-69373746:+|nuORF	ENST00000254940.9_1_16:69373578-69373746:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.724365234375	2	545.727446	1089.44034	0.038725	2.1133E-05	-3.503	-0.0019117	-3.4643	-0.0018906	545.7253809318471	24.371	0.59245	24.429	24.104	24.696	0.058167					63	27	3	0	0	0	0.77696	1	823	823		31.53	1.0262	1	214050			10167	9326	7164	7172	11626	11626					-0.10080290104133383
GASGAEPPGTR	11	Unmodified	_GASGAEPPGTR_					0	0	0			REV__ENST00000355897.9_1_3:169755731-169797649:+|nuORF	REV__ENST00000355897.9_1_3:169755731-169797649:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.2476806640625	2	500.246338	998.478122	-0.69161	-0.00034597	0.58038	0.00029033	-0.11123	-5.5641E-05	500.2465024862851	28.806	0.53036	28.786	28.523	29.053	-0.019407					28	16	2	0	0	0	0.62614	1	1421	1421		41.427	0	1	68410	+		10168	25383	7165	7173	11627	11627					-0.021177791186573813
GASGAEPPGTR	11	Unmodified	_GASGAEPPGTR_					0	0	0			REV__ENST00000355897.9_1_3:169755731-169797649:+|nuORF	REV__ENST00000355897.9_1_3:169755731-169797649:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	500.246338	998.478122	-0.62647	-0.00031339	0.31498	0.00015757	-0.31149	-0.00015582	500.246242784833	28.75	0.27176	28.818	28.694	28.965	0.06868	0.12856	0.00021358	NaN	41.427	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35515	+		10169	25383	7165	7173							-0.021177791186573813
GASGAEPPGTR	11	Unmodified	_GASGAEPPGTR_					0	0	0			REV__ENST00000355897.9_1_3:169755731-169797649:+|nuORF	REV__ENST00000355897.9_1_3:169755731-169797649:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	500.246338	998.478122	0.15054	7.5306E-05	-0.55878	-0.00027953	-0.40824	-0.00020422	500.2463346063263	28.482	0.38112	28.594	28.336	28.717	0.11225	-0.095943	-0.0006606	NaN	41.427	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60057	+		10170	25383	7165	7173							-0.021177791186573813
GASGMLPLR	9	Unmodified	_GASGMLPLR_					0	0	0		chrX:14869043-14872986|56|13.23|0.75|4.15|-|2|FANCB,FANCB|1	chrX:14869043-14872986|56|13.23|0.75|4.15|-|2|FANCB,FANCB|1	chrX:14869043-14872986|56|13.23|0.75|4.15|-|2|FANCB,FANCB|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.2475891113281	2	451.249837	900.485122	-1.0589	-0.00047784	-1.4176	-0.0006397	-2.4766	-0.0011175	451.2490578408484	67.679	1.2813	67.739	67.313	68.595	0.059288					106	47	3	0	0	0	0.77546	1	6027	6027		31.955	0	1	166740			10171	544	7166	7174	11628	11628					0.03089862228216589
GASHTRKRFR	10	Unmodified	_GASHTRKRFR_					0	0	0			REV__ENSG00000169047|ENST00000305123|IRS1	REV__ENSG00000169047|ENST00000305123|IRS1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.7724914550781	3	405.898767	1214.67447	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.633	1	17.678	17.178	18.178	0.0457								0	0	0	0.45132	1	263	263		26.063	6.8007	1		+		10172	21544	7167	7175	11629	11629					0.07572070565720423
GASKDIRLARI	11	Unmodified	_GASKDIRLARI_					0	0	0		ENST00000206423.7_2_3:112317611-112317761:-|nuORF	ENST00000206423.7_2_3:112317611-112317761:-|nuORF	ENST00000206423.7_2_3:112317611-112317761:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.57916259765625	3	400.578811	1198.7146	3.1796	0.0012737	1.3359	0.00053514	4.5155	0.0018088	400.57916816268914	115.86	0.63822	115.89	115.41	116.05	0.026466					29	20	2	0	0	0	0.74771	1	12711	12711		22.562	4.0305	1	56920			10173	9106	7168	7176	11630	11630					0.12319572445653648
GASLAAFSR	9	Unmodified	_GASLAAFSR_					0	0	0			REV__ENST00000589178.5_1_18:32870095-32870140:-|nuORF	REV__ENST00000589178.5_1_18:32870095-32870140:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2384033203125	2	440.237784	878.461016	0.94186	0.00041464	-0.30074	-0.0001324	0.64113	0.00028225	440.23748516276834	18.134	0.355	18.21	18.063	18.418	0.075441					16	9	2	0	0	0	0.74721	1	256	256		37.159	0	1	75602	+		10174	29158	7169	7177	11631	11631					0.016923450661806783
GASRAKSVKA	10	Unmodified	_GASRAKSVKA_					0	0	0			REV__ENST00000521006.5_1_10:102729324-102729387:+|nuORF	REV__ENST00000521006.5_1_10:102729324-102729387:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7909851074219	2	487.790715	973.566878	-1.0855	-0.00052952	0.66797	0.00032583	-0.41757	-0.00020369	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.86272	1	7663	7663		24.519	1.4767	1	309700	+		10175	28112	7170	7178	11632	11632					0.07903680911658739
GASRLPGPK	9	Unmodified	_GASRLPGPK_					0	0	0		ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78790283203125	2	441.761426	881.5083	0.11964	5.2854E-05	-0.39235	-0.00017332	-0.2727	-0.00012047	441.76104730750376	39.681	0.37155	39.651	39.322	39.694	-0.030273					10	8	2	0	0	0	0.20789	1	2766	2766		34.173	15.848	1	42972			10176	12524	7171	7179	11633	11633					0.06280624337182417
GASRVVRK	8	Unmodified	_GASRVVRK_					0	0	0		nc|ENSG00000288701|Q5JSZ5|PRRC2B;nc|ENSG00000288701|Q5JSZ5-5|PRRC2B	nc|ENSG00000288701|Q5JSZ5|PRRC2B	nc|ENSG00000288701|Q5JSZ5|PRRC2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.27410888671875	2	436.774868	871.535184	-0.34985	-0.00015281	-2.9642	-0.0012947	-3.314	-0.0014475	436.77383375696394	27.418	1.1225	27.379	27.041	28.164	-0.038523					45	25	2	0	0	0	0.84341	1	1357	1357		24.203	3.7209	1	85606			10177	15335	7172	7180	11634	11634					0.09427732948370249
GASTRARVQFV	11	Unmodified	_GASTRARVQFV_					0	0	0			REV__ENSG00000070886|ENST00000166244|EPHA8	REV__ENSG00000070886|ENST00000166244|EPHA8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.3324584960938	2	596.333279	1190.652	2.6389	0.0015737	-3.4063	-0.0020313	-0.76734	-0.00045759	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.67778	1	10320	10320		35.152	2.3396	1	1305600	+		10178	16617	7173	7181	11635	11635					0.06430426377460208
GASVGFSVR	9	Unmodified	_GASVGFSVR_					0	0	0			REV__ENST00000452600.1_1_2:130987586-130988813:+|nuORF	REV__ENST00000452600.1_1_2:130987586-130988813:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2382507324219	2	440.237784	878.461016	-0.3905	-0.00017191	0.98502	0.00043364	0.59452	0.00026173	440.2380657993963	18.443	0.50097	18.366	18.148	18.649	-0.07671					22	12	3	0	0	0	0.51307	1	306	306		51.335	1.8939	1	83776	+		10179	26899	7174	7182	11636	11636					0.01692345066192047
GASVKLLK	8	Unmodified	_GASVKLLK_					0	0	0			REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.2711181640625	2	408.271096	814.527639	0.16929	6.9115E-05	0.14041	5.7326E-05	0.3097	0.00012644	408.2710207965561	28.948	0.81922	28.919	28.61	29.429	-0.029207					41	18	3	0	0	0	0.73851	1	1803	1803		65.803	0	1	1001700	+		10180	20292	7175	7183	11637	11637					0.11295580628086554
GASWRLVD	8	Unmodified	_GASWRLVD_					0	0	0			REV__ENST00000515762.5_1_5:10442078-10461472:+|nuORF	REV__ENST00000515762.5_1_5:10442078-10461472:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.2392272949219	2	452.237784	902.461016	2.4335	0.0011005	1.4574	0.0006591	3.891	0.0017596	452.23834794535566	25.317	1.1666	24.886	24.272	25.439	-0.4311					55	26	3	0	0	0	0.73851	1	1310	1310		65.803	1.5959	1	516220	+		10181	19948	7176	7184	11638	11638					0.005883450661940515
GATALHRAS	9	Unmodified	_GATALHRAS_					0	0	0		ENSG00000213337|ENST00000393537|ANKRD39	ENSG00000213337|ENST00000393537|ANKRD39	ENSG00000213337|ENST00000393537|ANKRD39	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24090576171875	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.76255	3	7548	7206;7548;7750		35.618	5.1146	1	716910			10182	8584	7177	7185	11639;11640;11641	11640					0.021228632976999506
GATALHRAS	9	Unmodified	_GATALHRAS_					0	0	0		ENSG00000213337|ENST00000393537|ANKRD39	ENSG00000213337|ENST00000393537|ANKRD39	ENSG00000213337|ENST00000393537|ANKRD39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24090576171875	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.72402	1	8064	8064		38.806	5.9937	1	1094000			10183	8584	7177	7185	11642	11642					0.021228632976999506
GATALHRAS	9	Unmodified	_GATALHRAS_					0	0	0		ENSG00000213337|ENST00000393537|ANKRD39	ENSG00000213337|ENST00000393537|ANKRD39	ENSG00000213337|ENST00000393537|ANKRD39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24041748046875	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.78058	1	7945	7945		30.504	2.2494	1	968500			10184	8584	7177	7185	11643	11643					0.021228632976999506
GATEDDYYD	9	Unmodified	_GATEDDYYD_					0	0	0		ENSG00000106624|ENST00000223357|AEBP1	ENSG00000106624|ENST00000223357|AEBP1	ENSG00000106624|ENST00000223357|AEBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.6904296875	2	524.690726	1047.3669	0.6354	0.00033339	-2.955	-0.0015505	-2.3196	-0.0012171	524.6890176607623	25.671	0.81976	25.717	25.215	26.034	0.045509					50	33	2	0	0	0	0.7932	1	1052	1052		17.365	0.89182	1	57929			10185	2307	7178	7186	11644	11644					-0.15488883337275183
GATERRER	8	Unmodified	_GATERRER_					0	0	0			REV__ENST00000353383.5_2_17:17584885-17696414:+|nuORF	REV__ENST00000353383.5_2_17:17584885-17696414:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7599182128906	2	487.759946	973.50534	0.36374	0.00017742	-4.2547	-0.0020753	-3.8909	-0.0018978	487.75781934835595	24.271	0.61697	23.889	23.491	24.108	-0.38178					22	13	2	0	0	0	0.90089	1	1136	1136		39.253	3.6345	1	132580	+		10186	25350	7179	7187	11645	11645					0.017527492123690536
GATGGASP	8	Unmodified	_GATGGASP_					0	0	0		ENST00000604430.1_1_16:29332285-29370594:+|nuORF	ENST00000604430.1_1_16:29332285-29370594:+|nuORF	ENST00000604430.1_1_16:29332285-29370594:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	616.86669921875	1	617.288931	616.281654	-0.67759	-0.00041827	4.0561	0.0025038	3.3785	0.0020855	617.2903568921098	58.145	0.21153	58.539	58.399	58.611	0.39407					5	4	2	0	0	0	0.4196	1	6081	6081		19.36	5.5846	1	34705			10187	14429	7180	7188	11646	11646					-0.04183539221753563
GATGGAVL	8	Unmodified	_GATGGAVL_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-2|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	645.3056640625	1	645.356616	644.34934	1.4967	0.00096589	-1.3941	-0.00089971	0.10255	6.6181E-05	645.3554782278189	42.7	0.61019	42.706	42.424	43.034	0.0057526					25	18	2	0	0	0	0.4196	1	2850	2850		13.775	0	1	164190			10188	5938	7181	7189	11647	11647					0.012939107090460311
GATLRRLS	8	Unmodified	_GATLRRLS_					0	0	0			REV__ENST00000346348.7_1_6:86303399-86303597:-|nuORF	REV__ENST00000346348.7_1_6:86303399-86303597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26556396484375	2	437.266876	872.519199	0.46111	0.00020163	-3.2258	-0.0014106	-2.7647	-0.0012089	437.2654513325837	23.967	1.9466	23.969	23.291	25.237	0.0018959					213	95	5	0	0	0	0.81897	1	819	819		20.947	0.4651	1	2561300	+		10189	25320	7182	7190	11648	11648					0.0778402671146523
GATTTQFRV	9	Unmodified	_GATTTQFRV_					0	0	0		nc|ENSG00000120594|Q6UX71-3|PLXDC2;ENST00000377238.2_1_10:20332341-20568745:+|nuORF;nc|ENSG00000120594|Q6UX71-2|PLXDC2;ENSG00000120594|ENST00000377252|PLXDC2	nc|ENSG00000120594|Q6UX71-3|PLXDC2	nc|ENSG00000120594|Q6UX71-3|PLXDC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.7619323730469	2	490.761623	979.508694	1.0176	0.0004994	-1.0729	-0.00052653	-0.055295	-2.7137E-05	490.76098743641063	19.162	0.4111	19.235	19.012	19.423	0.073465					20	12	2	0	0	0	0.77244	1	372	372		32.812	0	1	51389			10190	3137	7183	7191	11649	11649					0.01811999266374187
GAVAQILK	8	Unmodified	_GAVAQILK_					0	0	0			REV__ENSG00000158008|ENST00000374280|EXTL1	REV__ENSG00000158008|ENST00000374280|EXTL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.25579833984375	2	400.255446	798.496338	0.011592	4.6399E-06	0.58388	0.0002337	0.59547	0.00023834	400.2555487466678	18.628	0.42853	18.007	17.813	18.241	-0.62141					20	9	3	0	0	0	0.9159	1	424	424		44.531	0	1	235650	+		10191	20579	7184	7192	11650	11650					0.08903007593994516
GAVEDLILF	9	Unmodified	_GAVEDLILF_					0	0	0			REV__ENST00000308191.10_1_6:136172954-136173146:+|nuORF	REV__ENST00000308191.10_1_6:136172954-136173146:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.77197265625	2	488.771126	975.527698	-0.25634	-0.00012529	0.33602	0.00016424	0.079687	3.8949E-05	488.7710604968921	85.872	0.86259	86.315	85.989	86.852	0.44331					47	20	3	0	0	0	0.39977	1	10036	10036		57.811	0	1	694790	+		10192	24861	7185	7193	11651	11651					0.03895535837432362
GAVGDRHRRSS	11	Unmodified	_GAVGDRHRRSS_					0	0	0			REV__nc|ENSG00000161642|Q96PM9-2|ZNF385A	REV__nc|ENSG00000161642|Q96PM9-2|ZNF385A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	599.3114013671875	2	599.313409	1196.61226	-1.3337	-0.00079933	-2.2771	-0.0013647	-3.6109	-0.002164	599.3118327359726	42.028	0.54232	42.442	42.163	42.706	0.4139					27	13	3	0	0	0	0.45916	1	3719	3719		54.776	3.4409	1	929140	+		10193	20771	7186	7194	11652	11652					0.021822994267722606
GAVLFLLHR	9	Unmodified	_GAVLFLLHR_					0	0	0			REV__ENST00000368346.7_1_1:155452050-155490922:-|nuORF	REV__ENST00000368346.7_1_1:155452050-155490922:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3154907226562	2	513.316369	1024.61818	-0.38471	-0.00019748	1.1486	0.00058958	0.76386	0.0003921	513.3169360200682	55.22	1.0911	55.284	54.878	55.969	0.063721					55	37	2	0	0	0	0.78983	1	4586	4586		27.882	2.4321	1	243480	+		10194	25592	7187	7195	11653	11653					0.10686049676360199
GAVLLKLV	8	Unmodified	_GAVLLKLV_					0	0	0			REV__ENSG00000167701|ENST00000394955|GPT	REV__ENSG00000167701|ENST00000394955|GPT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78533935546875	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.81548	1	1435	1435		20.482	4.8456	1	1817700	+		10195	21419	7188	7196	11654	11654					0.13981055150497923
GAVLRMLL	8	Unmodified	_GAVLRMLL_					0	0	0		ENST00000532554.5_1_11:45935680-45939362:-|nuORF	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	ENST00000532554.5_1_11:45935680-45939362:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.7737121582031	2	436.772948	871.531344	1.4261	0.00062287	0.087506	3.822E-05	1.5136	0.00066109	436.7729940973578	27.77	1.2677	27.515	27.282	28.55	-0.25465					51	30	3	0	0	0	0.85277	1	1667	1667		25.45	0	1	1148800			10196	13381	7189	7197	11655	11655					0.0904392713028983
GAVLSTRKH	9	Unmodified	_GAVLSTRKH_					0	0	0		nc|ENSG00000176884|Q05586-2|GRIN1;nc|ENSG00000176884|Q05586-3|GRIN1;nc|ENSG00000176884|Q05586-7|GRIN1;nc|ENSG00000176884|Q05586-4|GRIN1;ENSG00000176884|ENST00000371561|GRIN1;nc|ENSG00000176884|Q05586-6|GRIN1;nc|ENSG00000176884|Q05586-5|GRIN1	nc|ENSG00000176884|Q05586-2|GRIN1	nc|ENSG00000176884|Q05586-2|GRIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.2862548828125	2	484.785433	967.556313	-1.1421	-0.00055367	1.9636	0.00095194	0.82152	0.00039826	484.78789018167805	41.476	1.8948	41.435	40.856	42.751	-0.04081					148	48	4	0	0	0	0.6204	1	3110	3110		45.972	0.020292	1	1666200			10197	7100	7190	7198	11656	11656					0.07123698257237265
GAVPVKKK	8	Unmodified	_GAVPVKKK_					0	0	0			REV__ENSG00000085760|ENST00000263629|MTIF2	REV__ENSG00000085760|ENST00000263629|MTIF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.7792053222656	2	413.779088	825.543623	-0.13628	-5.639E-05	1.2148	0.00050267	1.0786	0.00044628	413.77921677117615	29.317	0.86463	29.288	28.997	29.862	-0.029207					39	19	4	0	0	0	0.9159	1	1835	1835		44.531	2.0566	1	209280	+		10198	16897	7191	7199	11657	11657					0.12387286864998259
GAVRYLPG	8	Unmodified	_GAVRYLPG_					0	0	0			REV__nc|ENSG00000162729|Q969P0-3|IGSF8	REV__nc|ENSG00000162729|Q969P0-3|IGSF8	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	416.2284240722656	2	416.73742	831.460287	-1.9389	-0.00080803	0.75239	0.00031355	-1.1866	-0.00049448	416.7378296302456	36.118	0.54607	36.118	35.879	36.425	0					20	13	3	0	0	0	0.4196	1	2077	2077		4.6817	0	1	129980	+		10199	20841	7192	7200	11658	11658					0.03781550417147628
GAVSSRAPKPS	11	Unmodified	_GAVSSRAPKPS_					0	0	0			REV__nc|ENSG00000108395|O94972-2|TRIM37	REV__nc|ENSG00000108395|O94972-2|TRIM37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7923583984375	2	528.793455	1055.57236	1.5726	0.00083159	-1.7971	-0.00095027	-0.22444	-0.00011868	528.7924826805944	35.727	2.3531	36.168	35.922	38.275	0.44043					117	58	5	0	0	0	0.36477	1	2753	2753		62.107	1.9892	1	18377000	+		10200	17708	7193	7201	11659	11659					0.046793597034593404
GAWERSPICCF	11	Unmodified	_GAWERSPICCF_					0	0	0		ENST00000416860.2_2_1:2485669-2486552:-|nuORF	ENST00000416860.2_2_1:2485669-2486552:-|nuORF	ENST00000416860.2_2_1:2485669-2486552:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.7847290039062	2	634.781176	1267.5478	1.2636	0.00080211	3.3332	0.0021159	4.5968	0.002918	634.783220093659	30.685	0.43643	30.689	30.491	30.928	0.0037212					24	9	4	0	0	0	0.68532	1	2056	2056		33.922	15.391	1	472030			10201	11402	7194	7202	11660	11660					-0.07527359765936126
GAWLLRAVP	9	Unmodified	_GAWLLRAVP_					0	0	0			REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7973327636719	2	491.795269	981.575986	-0.6792	-0.00033403	1.662	0.00081738	0.98283	0.00048335	491.79613138521415	68.552	1.3365	68.687	67.92	69.256	0.13522					82	52	2	0	0	0	0.7932	1	6105	6105		24.203	2.5004	1	104550	+		10202	27033	7195	7203	11661	11661					0.08446074267988024
GAWLLRAVP	9	Unmodified	_GAWLLRAVP_					0	0	0			REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	491.795269	981.575986	-1.2668	-0.00062298	1.1133	0.00054749	-0.1535	-7.5491E-05	491.79622554179525	68.481	0.52812	68.481	68.124	68.652	0	-0.1956	-0.00032642	NaN	24.203	26	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38186	+		10203	27033	7195	7203							0.08446074267988024
GAWLLRAVP	9	Unmodified	_GAWLLRAVP_					0	0	0			REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	491.795269	981.575986	-0.080672	-3.9674E-05	0.62138	0.00030559	0.54071	0.00026592	491.79579192936484	68.743	0.90068	68.769	68.325	69.226	0.02636	0.092619	-0.00081021	NaN	24.203	69	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116830	+		10204	27033	7195	7203							0.08446074267988024
GAWLLRAVP	9	Unmodified	_GAWLLRAVP_					0	0	0			REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	491.795269	981.575986	-0.62404	-0.0003069	1.3058	0.00064218	0.68175	0.00033528	491.79602318963305	68.816	1.5077	68.779	67.974	69.482	-0.03643	0.10255	-0.00013704	NaN	24.203	103	60	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115150	+		10205	27033	7195	7203							0.08446074267988024
GAWLLRAVP	9	Unmodified	_GAWLLRAVP_					0	0	0			REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	491.795269	981.575986	-2.1825	-0.0010733	2.7829	0.0013686	0.60046	0.0002953	491.7968680839498	68.628	1.4597	68.661	67.936	69.396	0.033005	-0.015973	0.0013159	NaN	24.203	100	59	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98014	+		10206	27033	7195	7203							0.08446074267988024
GAWLLRAVP	9	Unmodified	_GAWLLRAVP_					0	0	0			REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	491.795269	981.575986	-0.6792	-0.00033403	1.662	0.00081738	0.98283	0.00048335	491.79613138521415	68.552	1.3365	68.687	67.92	69.256	0.13522	0.010088	0.00021336	NaN	24.203	82	52	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104550	+		10207	27033	7195	7203							0.08446074267988024
GAWLLRAVP	9	Unmodified	_GAWLLRAVP_					0	0	0			REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	491.795269	981.575986	0.50451	0.00024812	0.39279	0.00019317	0.8973	0.00044129	491.7954959304809	68.439	1.1952	68.568	68.181	69.377	0.12838	-0.10897	-0.0010351	NaN	24.203	71	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127850	+		10208	27033	7195	7203							0.08446074267988024
GAWSRVPR	8	Unmodified	_GAWSRVPR_					0	0	0		ENST00000463762.1_1_3:52739903-52740029:-|nuORF	ENST00000463762.1_1_3:52739903-52740029:-|nuORF	ENST00000463762.1_1_3:52739903-52740029:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.760498046875	2	464.759218	927.503883	-0.34562	-0.00016063	3.6113	0.0016784	3.2657	0.0015178	464.7606525267958	78.466	0.88814	78.877	78.551	79.439	0.4106					42	20	3	0	0	0	0.90523	1	8943	8943		40.778	7.2626	1	737300			10209	12075	7196	7204	11662	11662					0.03723159914284224
GCCAALKAL	9	Unmodified	_GCCAALKAL_					0	0	0		nc|ENSG00000168710|O43865-2|AHCYL1;ENSG00000168710|ENST00000369799|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	425.2219543457031	2	425.219691	848.42483	1.1463	0.00048741	3.7903	0.0016117	4.9366	0.0020991	425.22118983935917	88.495	1.5344	88.421	87.942	89.477	-0.074005					90	36	3	0	0	0	0.69914	1	9211	9211		40.573	3.5441	1	1170300			10210	6429	7197	7205	11663	11663					-0.005445714265306378
GCCAALKAL	9	Unmodified	_GCCAALKAL_					0	0	0		nc|ENSG00000168710|O43865-2|AHCYL1;ENSG00000168710|ENST00000369799|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	425.22198486328125	2	425.219691	848.42483	2.7046	0.0011501	2.2163	0.0009424	4.9209	0.0020925	425.22052081582814	88.286	1.4528	88.336	87.945	89.398	0.050415					74	34	3	0	0	0	0.7932	1	9063	9063		25.45	3.7478	1	1023100			10211	6429	7197	7205	11664	11664					-0.005445714265306378
GCCAALKAL	9	Unmodified	_GCCAALKAL_					0	0	0		nc|ENSG00000168710|O43865-2|AHCYL1;ENSG00000168710|ENST00000369799|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	425.219691	848.42483	-0.92314	-0.00039254	6.0248	0.0025619	5.1017	0.0021693	425.2221274474839	88.164	1.0815	88.627	88.185	89.267	0.46312	0.12118	0.0010005	NaN	40.573	62	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	883790			10212	6429	7197	7205							-0.005445714265306378
GCDNDYDCQW	10	Unmodified	_GCDNDYDCQW_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24859619140625	3	406.799067	1217.37537	1.1145	0.00045339	-2.982	-0.0012131	-1.8675	-0.00075968	407.13261566618456	88.338	0.32837	88.264	88.03	88.358	-0.074005					7	5	2	0	0	0	0.37624	1	9178	9178		8.2351	5.0238	1	25416	+		10213	18541	7198	7206	11665	11665					-0.22461975963960867
GCFVVFIV	8	Unmodified	_GCFVVFIV_					0	0	0			REV__ENST00000579188.1_1_17:80358582-80358996:-|nuORF	REV__ENST00000579188.1_1_17:80358582-80358996:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2411193847656	2	442.24095	882.467346	-0.73522	-0.00032514	0.50753	0.00022445	-0.22769	-0.00010069	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.88393	1	9374	9374		33.493	0	1	866900	+		10214	29031	7199	7207	11666	11666					0.021411469733493504
GCGNLHREL	9	Unmodified	_GCGNLHREL_					0	0	0		ENSG00000139567|ENST00000388922|ACVRL1	ENSG00000139567|ENST00000388922|ACVRL1	ENSG00000139567|ENST00000388922|ACVRL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.746826171875	2	499.74545	997.476348	-0.85273	-0.00042615	3.8456	0.0019218	2.9929	0.0014957	499.74724797378053	74.742	3.1094	75.133	73.907	77.016	0.3911					155	76	3	0	0	0	0.64555	1	8484	8484		44.377	3.599	1	1032200			10215	4379	7200	7208	11667	11667					-0.022491114082640706
GCGQFSVN	8	Unmodified	_GCGQFSVN_					0	0	0			REV__ENSG00000004399|ENST00000324093|PLXND1	REV__ENSG00000004399|ENST00000324093|PLXND1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.17608642578125	2	406.173795	810.333038	2.4175	0.00098194	2.2498	0.00091382	4.6673	0.0018958	406.1750105746681	95.369	1.3884	95.789	94.967	96.355	0.42051					87	33	4	0	0	0	0.85277	1	11384	11384		25.45	2.4077	1	1050400	+		10216	16057	7201	7209	11668	11668					-0.07971538519359456
GCIGGVPGLK	10	Unmodified	_GCIGGVPGLK_					0	0	0			REV__nc|ENSG00000196243|Q96LM1|LINC00615	REV__nc|ENSG00000196243|Q96LM1|LINC00615	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.75604248046875	2	450.752213	899.489873	0.78549	0.00035406	3.5542	0.0016021	4.3397	0.0019561	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.67608	1	8217	8217		45.952	1.8352	1	420760	+		10217	30126	7202	7210	11669	11669					0.0361074637096408
GCIGGVPGLK	10	Unmodified	_GCIGGVPGLK_					0	0	0			REV__nc|ENSG00000196243|Q96LM1|LINC00615	REV__nc|ENSG00000196243|Q96LM1|LINC00615	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.75506591796875	2	450.752213	899.489873	0.58167	0.00026219	3.7253	0.0016792	4.307	0.0019414	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.85934	1	7770	7770		35.618	0.41757	1	285810	+		10218	30126	7202	7210	11670	11670					0.0361074637096408
GCILGGILVV	10	Unmodified	_GCILGGILVV_					0	0	0		ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28631591796875	2	472.285889	942.557224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.98	1	118.96	118.46	119.46	-0.024101								0	0	0	0.45132	1	13184	13184		26.796	7.4361	1				10219	3307	7203	7211	11671	11671					0.08364776581913702
GCLLERLP	8	Unmodified	_GCLLERLP_					0	0	0		nc|ENSG00000253117|Q02509-3|OC90;ENSG00000253117|ENST00000254627|OC90	nc|ENSG00000253117|Q02509-3|OC90	nc|ENSG00000253117|Q02509-3|OC90	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.75311279296875	2	450.752213	899.489873	0.5597	0.00025229	3.7702	0.0016994	4.3299	0.0019517	450.7538239580323	79.562	2.1146	79.701	78.151	80.265	0.13883					102	73	2	0	0	0	0.8347	1	7553	7553		23.042	2.0956	1	128600			10220	15289	7204	7212	11672	11672					0.036107463709754484
GCLLPFFT	8	Unmodified	_GCLLPFFT_					0	0	0		ENSG00000152207|ENST00000682523|CYSLTR2	ENSG00000152207|ENST00000682523|CYSLTR2	ENSG00000152207|ENST00000682523|CYSLTR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2335510253906	2	449.230582	896.446611	-1.619	-0.00072729	1.7475	0.00078505	0.12856	5.7755E-05	449.23133844286133	83.319	3.7519	83.457	82.118	85.87	0.13811					166	86	3	0	0	0	0.87276	1	7993	7993		29.842	0.69198	1	160270			10221	5160	7205	7213	11673	11673					-0.005754434063192093
GCLMDRKI	8	Unmodified	_GCLMDRKI_					0	0	0		nc|ENSG00000173567|Q8IZF5-2|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3;ENST00000459892.5_1_2:26531956-26538428:-|nuORF;nc|ENSG00000173567|Q8IZF5-3|ADGRF3;nc|ENSG00000173567|Q8IZF5|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2424621582031	2	468.243698	934.472843	-0.58318	-0.00027307	4.0497	0.0018963	3.4665	0.0016232	468.24540363646156	47.508	2.0762	47.505	46.933	49.01	-0.002449					126	59	4	0	0	0	0.91005	1	4009	4009		42.474	0.078325	1	1948700			10222	6868	7206	7214	11674	11674					0.002985024935014735
GCLPSRTASL	10	Unmodified	_GCLPSRTASL_					0	0	0			REV__ENST00000450269.5_1_1:45279484-45279676:+|nuORF	REV__ENST00000450269.5_1_1:45279484-45279676:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	502.8139343261719	2	502.763309	1003.51206	-0.46317	-0.00023287	-1.6775	-0.0008434	-2.1407	-0.0010763	502.7618535457053	96.997	0.32493	97.228	97.126	97.451	0.23103					13	7	2	0	0	0	0.37624	1	10000	10000		25.574	0	1	64588	+		10223	26866	7207	7215	11675	11675					0.010449260487234824
GCPEVPSH	8	Unmodified	_GCPEVPSH_					0	0	0		ENST00000295951.7_1_3:57742468-57743248:+|nuORF	ENST00000295951.7_1_3:57742468-57743248:+|nuORF	ENST00000295951.7_1_3:57742468-57743248:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1840515136719	2	413.18162	824.348688	2.0036	0.00082786	1.8965	0.0007836	3.9001	0.0016115	413.18277054138287	99.966	1.3545	100.32	99.907	101.26	0.35072					93	33	4	0	0	0	0.88915	1	12120	12120		35.201	5.3592	1	6662300			10224	9725	7208	7216	11676	11676					-0.07051252002304409
GCQCISSAP	9	Unmodified	_GCQCISSAP_					0	0	0			REV__ENSG00000148803|ENST00000278025|FUOM	REV__ENSG00000148803|ENST00000278025|FUOM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.1816101074219	2	433.180763	864.346973	1.3748	0.00059552	-0.7583	-0.00032848	0.61645	0.00026704	433.18028489826514	97.539	1.1827	97.924	97.159	98.341	0.38548					51	28	2	0	0	0	0.78058	1	11726	11726		30.504	0.6621	1	287760	+		10225	20138	7209	7217	11677	11677					-0.09062629082563944
GCRPKKIV	8	Unmodified	_GCRPKKIV_					0	0	0			REV__ENSG00000137674|ENST00000260228|MMP20	REV__ENSG00000137674|ENST00000260228|MMP20	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.77764892578125	2	450.776022	899.537492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.46	1	115.46	114.96	115.96	-0.0021133								0	0	0	0.30784	1	13906	13906		14.664	0	1		+		10226	19399	7210	7218	11678	11678					0.08370445361833845
GDACDHDDD	9	Unmodified	_GDACDHDDD_					0	0	0		nc|ENSG00000137801|P07996-2|THBS1;ENSG00000137801|ENST00000260356|THBS1;CON__Q28194	nc|ENSG00000137801|P07996-2|THBS1	nc|ENSG00000137801|P07996-2|THBS1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.6855773925781	2	481.643253	961.271954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.84	1	71.97	71.47	72.47	0.1301								0	0	0	0.34348	1	6565	6565		16.473	0.83134	1			+	10227	609	7211	7219	11679	11679					-0.21023140080126268
GDACSFAH	8	Unmodified	_GDACSFAH_					0	0	0			REV__ENSG00000123989|ENST00000243776|CHPF	REV__ENSG00000123989|ENST00000243776|CHPF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.170166015625	2	404.158145	806.301738	-1.318	-0.0005327	0.8781	0.00035489	-0.43994	-0.0001778	404.1583840681065	78.689	0.1907	78.689	78.573	78.763	0					8	5	2	0	0	0	0.4196	1	7213	7213		11.511	5.1984	1	19666	+		10228	18551	7212	7220	11680	11680					-0.10916111553456176
GDACSFAH	8	Unmodified	_GDACSFAH_					0	0	0			REV__ENSG00000123989|ENST00000243776|CHPF	REV__ENSG00000123989|ENST00000243776|CHPF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.1702575683594	2	404.158145	806.301738	0.012389	5.007E-06	2.1734	0.00087838	2.1857	0.00088339	404.1588034646118	78.698	0.49324	78.645	78.258	78.751	-0.053558					17	12	2	0	0	0	0.4196	1	7831	7831		25.45	8.0852	1	56084	+		10229	18551	7212	7220	11681	11681					-0.10916111553456176
GDACSFAH	8	Unmodified	_GDACSFAH_					0	0	0			REV__ENSG00000123989|ENST00000243776|CHPF	REV__ENSG00000123989|ENST00000243776|CHPF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.1705017089844	2	404.158145	806.301738	1.2812	0.0005178	-2.6477	-0.0010701	-1.3665	-0.00055229	404.156466484239	77.917	0.52737	78.322	78.018	78.546	0.40531					16	12	2	0	0	0	0.4196	1	8913	8913		31.955	6.5047	1	227230	+		10230	18551	7212	7220	11682	11682					-0.10916111553456176
GDAIGLRDM	9	Unmodified	_GDAIGLRDM_					0	0	0			REV__ENSG00000130347|ENST00000369063|RTN4IP1	REV__ENSG00000130347|ENST00000369063|RTN4IP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.23583984375	2	474.234384	946.454216	-0.38204	-0.00018118	3.3461	0.0015868	2.964	0.0014056	474.23567947763615	29.497	0.86163	29.407	28.93	29.792	-0.089544					36	19	3	0	0	0	0.30689	1	1882	1882		64.207	5.4253	1	315650	+		10231	18869	7213	7221	11683	11683					-0.02115335876703739
GDAKKVVV	8	Unmodified	_GDAKKVVV_					0	0	0			REV__nc|ENSG00000069020|O15021-2|MAST4	REV__nc|ENSG00000069020|O15021-2|MAST4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.7394104003906	2	408.252903	814.491253	0.95079	0.00038816	-0.51205	-0.00020905	0.43873	0.00017911	408.25225151611687	37.318	0.43927	37.329	37.24	37.679	0.011173					11	9	2	0	0	0	0.4196	1	2521	2521		6.7355	0.81444	1	16784	+		10232	16574	7214	7222	11684	11684					0.07658703731385685
GDALPAQYL	9	Unmodified	_GDALPAQYL_					0	0	0			REV__chr19:46120320-46123886|33|109.58|0.18|9.23|-|0|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120320|None,IGFL3|1	REV__chr19:46120320-46123886|33|109.58|0.18|9.23|-|0|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120320|None,IGFL3|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.23583984375	2	474.245275	946.475997	-0.43063	-0.00020422	4.0327	0.0019125	3.6021	0.0017083	474.24710797215835	29.6	0.34478	29.51	29.362	29.706	-0.089544					11	7	2	0	0	0	0.19701	1	1882	1882		87.754	34.403	1	93711	+		10233	15710	7215	7223	11685	11685					0.0006179214351504925
GDAPTRSLSL	10	Unmodified	_GDAPTRSLSL_					0	0	0			REV__nc|ENSG00000155313|Q9UHP3|USP25	REV__nc|ENSG00000155313|Q9UHP3|USP25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7694396972656	2	508.772188	1015.52982	1.319	0.00067108	-1.5385	-0.00078273	-0.21946	-0.00011166	508.77133558794765	49.499	0.60856	50.344	50.074	50.683	0.84501					37	14	3	0	0	0	0.2953	1	4863	4863		72.879	16.158	1	1920100	+		10234	20423	7216	7224	11686	11686					0.022679645752418764
GDARIAKN	8	Unmodified	_GDARIAKN_					0	0	0		nc|ENSG00000112769|Q16363-2|LAMA4;nc|ENSG00000112769|Q16363|LAMA4;ENSG00000112769|ENST00000230538|LAMA4;ENST00000518842.1_1_6:112510294-112512967:-|nuORF	nc|ENSG00000112769|Q16363-2|LAMA4	nc|ENSG00000112769|Q16363-2|LAMA4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5924377441406	2	422.735409	843.456264	2.0615	0.00087146	3.5528	0.0015019	5.6143	0.0023734	422.7367051844144	50.396	0.74919	50.403	49.991	50.74	0.007061					41	17	4	0	0	0	0.4196	1	4264	4264		26.693	3.6504	1	464430			10235	2679	7217	7225	11687	11687					0.028274609234244963
GDATGVDRNI	10	Unmodified	_GDATGVDRNI_					0	0	0		nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP;ENSG00000107651|ENST00000369075|SEC23IP	nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP	nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2520751953125	2	509.25162	1016.48869	0.0098394	5.0107E-06	0.64969	0.00033086	0.65953	0.00033587	509.2517561622594	45.726	0.99979	46.621	46.327	47.327	0.89542					60	24	3	0	0	0	0.66675	1	4287	4287		46.457	4.0606	1	2046500			10236	2357	7218	7226	11688	11688					-0.018897964642519582
GDATMRTR	8	Unmodified	_GDATMRTR_					0	0	0			REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	454.22601318359375	2	454.224351	906.434149	-1.2135	-0.0005512	1.9388	0.00088064	0.72527	0.00032944	454.2250860481267	79.26	2.7145	79.391	78.546	81.261	0.13086					117	81	2	0	0	0	0.87064	1	7588	7588		29.15	0.89528	1	104980	+		10237	29808	7219	7227	11689	11689					-0.02281086816651623
GDATMRTR	8	Unmodified	_GDATMRTR_					0	0	0			REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	454.224351	906.434149	0.41854	0.00019011	0.27032	0.00012279	0.68886	0.0003129	454.22439424611343	79.339	1.2218	79.392	78.574	79.796	0.053841	-0.0046952	-0.0011958	NaN	29.15	54	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93213	+		10238	29808	7219	7227							-0.02281086816651623
GDATMRTR	8	Unmodified	_GDATMRTR_					0	0	0			REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	454.224351	906.434149	-1.2135	-0.0005512	1.9388	0.00088064	0.72527	0.00032944	454.2250860481267	79.26	2.7145	79.391	78.546	81.261	0.13086	-0.0059534	0.00031992	NaN	29.15	117	81	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104980	+		10239	29808	7219	7227							-0.02281086816651623
GDATMRTR	8	Unmodified	_GDATMRTR_					0	0	0			REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	454.224351	906.434149	-1.4652	-0.00066553	2.1501	0.00097663	0.68491	0.0003111	454.2252417993795	79.46	1.8875	79.559	78.604	80.492	0.098694	0.16182	0.00051191	NaN	29.15	110	61	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87335	+		10240	29808	7219	7227							-0.02281086816651623
GDDLLDIN	8	Unmodified	_GDDLLDIN_					0	0	0			REV__ENSG00000178852|ENST00000331493|EFCAB13	REV__ENSG00000178852|ENST00000331493|EFCAB13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7098388671875	2	437.711265	873.407977	-0.087909	-3.8479E-05	-4.0623	-0.0017781	-4.1502	-0.0018166	437.7093349328845	85.223	1.5345	85.67	85.033	86.568	0.44736					59	37	2	0	0	0	0.86677	1	9968	9968		27.882	1.0861	1	470610	+		10241	22298	7220	7228	11690	11690					-0.03379077507145212
GDDLMPGH	8	Unmodified	_GDDLMPGH_					0	0	0			REV__ENSG00000137809|ENST00000315757|ITGA11	REV__ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.180908203125	2	421.179078	840.343602	1.7924	0.00075494	1.9397	0.00081698	3.7322	0.0015719	421.1801990749939	95.735	1.0742	96.155	95.785	96.859	0.42051					52	25	4	0	0	0	0.92176	1	11461	11461		46.766	7.9603	1	910940	+		10242	19409	7221	7229	11691	11691					-0.08295555864924609
GDEGIASY	8	Unmodified	_GDEGIASY_					0	0	0			REV__ENST00000485303.5_1_3:110852670-110852778:+|nuORF	REV__ENST00000485303.5_1_3:110852670-110852778:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.1756286621094	2	406.177058	810.339563	0.30537	0.00012404	-2.6747	-0.0010864	-2.3693	-0.00096235	406.17587455493447	95.496	1.4528	95.915	95.061	96.514	0.41964					68	35	2	0	0	0	0.90465	1	11451	11451		40.573	0	1	1268100	+		10243	27523	7222	7230	11692	11692					-0.07319322086993907
GDEGIASY	8	Unmodified	_GDEGIASY_					0	0	0			REV__ENST00000485303.5_1_3:110852670-110852778:+|nuORF	REV__ENST00000485303.5_1_3:110852670-110852778:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.177058	810.339563	3.1802	0.0012917	-6.1555	-0.0025002	-2.9754	-0.0012085	406.17435699468615	95.499	0.54707	95.546	95.33	95.877	0.046989	-0.20411	-0.0019292	NaN	40.573	14	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39435	+		10244	27523	7222	7230							-0.07319322086993907
GDEKQKKREI	10	Unmodified	_GDEKQKKREI_					0	0	0		ENSG00000188994|ENST00000369577|ZNF292;nc|ENSG00000188994|O60281-2|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	615.8427734375	2	615.843676	1229.6728	0.94451	0.00058167	-0.94937	-0.00058466	-0.0048626	-2.9946E-06	615.8430125140138	17.633	0.244	17.151	17.035	17.279	-0.48256					13	5	3	0	0	0	0.69342	1	291	291		49.442	17.912	1	70866			10245	7979	7223	7231	11693	11693					0.06714971966471239
GDEKQKKREI	10	Unmodified	_GDEKQKKREI_					0	0	0		ENSG00000188994|ENST00000369577|ZNF292;nc|ENSG00000188994|O60281-2|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	615.843676	1229.6728	0.68658	0.00042282	-0.93193	-0.00057393	-0.24536	-0.0001511	615.8430302612707	17.791	0.28568	17.169	17.023	17.308	-0.62141	0.0093693	1.3416E-05	NaN	49.442	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91057			10246	7979	7223	7231							0.06714971966471239
GDELVKLPVKL	11	Unmodified	_GDELVKLPVKL_					0	0	0		ENSG00000037280|ENST00000261937|FLT4;nc|ENSG00000037280|P35916-3|FLT4;nc|ENSG00000037280|P35916-1|FLT4;ENST00000507059.5_1_5:180043993-180056331:-|nuORF	ENSG00000037280|ENST00000261937|FLT4;ENST00000507059.5_1_5:180043993-180056331:-|nuORF	ENSG00000037280|ENST00000261937|FLT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.8724365234375	2	605.873914	1209.73327	-0.046166	-2.7971E-05	-3.0583	-0.0018529	-3.1044	-0.0018809	605.8718844200029	100.18	2.006	100.22	99.762	101.77	0.046349					129	46	5	0	0	0	0.70737	1	10734	10734		30.318	5.7985	1	1666000			10247	907;12951	7224	7232	11694	11694					0.13679689296850484
GDEQPGTPAP	10	Unmodified	_GDEQPGTPAP_					0	0	0		nc|ENSG00000135119|Q96EX2-3|RNFT2;ENST00000547718.5_1_12:117186478-117290514:+|nuORF;nc|ENSG00000135119|Q96EX2-5|RNFT2;ENSG00000135119|ENST00000257575|RNFT2;nc|ENSG00000135119|Q96EX2-2|RNFT2	nc|ENSG00000135119|Q96EX2-3|RNFT2	nc|ENSG00000135119|Q96EX2-3|RNFT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.7174987792969	2	484.719621	967.42469	0.76607	0.00037133	-3.3896	-0.001643	-2.6235	-0.0012717	484.71784448733064	98.881	4.1852	99.038	95.672	99.857	0.15659					143	97	2	0	0	0	0.76096	2	10139	10139;10174		41.427	8.9351	1	472970			10248	3986	7225	7233	11695;11696	11695					-0.06032576621191765
GDEQPGTPAP	10	Unmodified	_GDEQPGTPAP_					0	0	0		nc|ENSG00000135119|Q96EX2-3|RNFT2;ENST00000547718.5_1_12:117186478-117290514:+|nuORF;nc|ENSG00000135119|Q96EX2-5|RNFT2;ENSG00000135119|ENST00000257575|RNFT2;nc|ENSG00000135119|Q96EX2-2|RNFT2	nc|ENSG00000135119|Q96EX2-3|RNFT2	nc|ENSG00000135119|Q96EX2-3|RNFT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.71820068359375	2	484.719621	967.42469	1.6171	0.00078385	-4.4441	-0.0021542	-2.827	-0.0013703	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.64457	1	11628	11628		47.657	12.457	1	7541600			10249	3986	7225	7233	11697	11697					-0.06032576621191765
GDEQPGTPAP	10	Unmodified	_GDEQPGTPAP_					0	0	0		nc|ENSG00000135119|Q96EX2-3|RNFT2;ENST00000547718.5_1_12:117186478-117290514:+|nuORF;nc|ENSG00000135119|Q96EX2-5|RNFT2;ENSG00000135119|ENST00000257575|RNFT2;nc|ENSG00000135119|Q96EX2-2|RNFT2	nc|ENSG00000135119|Q96EX2-3|RNFT2	nc|ENSG00000135119|Q96EX2-3|RNFT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7182922363281	2	484.719621	967.42469	1.0671	0.00051723	-3.9124	-0.0018964	-2.8453	-0.0013792	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.77314	1	11625	11625		40.778	3.6191	1	7522200			10250	3986	7225	7233	11698	11698					-0.06032576621191765
GDEQVVPAP	9	Unmodified	_GDEQVVPAP_					0	0	0		ENST00000584342.5_1_17:27052953-27062286:+|nuORF	ENST00000584342.5_1_17:27052953-27062286:+|nuORF	ENST00000584342.5_1_17:27052953-27062286:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7929382324219	2	456.227082	910.439611	0.30916	0.00014105	0.45847	0.00020917	0.76763	0.00035021	456.22721745401617	37.545	0.42088	38.031	37.789	38.21	0.48581					14	10	2	0	0	0	0.20789	1	3058	3058		58.782	3.2778	1	61334			10251	14132	7226	7234	11699	11699					-0.019190847531831423
GDFGAQCK	8	Unmodified	_GDFGAQCK_					0	0	0			REV__ENSG00000134250|ENST00000256646|NOTCH2	REV__ENSG00000134250|ENST00000256646|NOTCH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1830749511719	2	413.18162	824.348688	2.4158	0.00099815	-0.090388	-3.7347E-05	2.3254	0.0009608	413.18190794566056	101.46	1.3715	101.76	101.48	102.86	0.2999					93	36	5	0	0	0	0.87479	1	12339	12339		30.504	0.6621	1	7829900	+		10252	19125	7227	7235	11700	11700					-0.07051252002304409
GDFVALCT	8	Unmodified	_GDFVALCT_					0	0	0		ENST00000229195.7_2_12:70748499-70748670:+|nuORF	ENST00000229195.7_2_12:70748499-70748670:+|nuORF	ENST00000229195.7_2_12:70748499-70748670:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.19366455078125	2	413.194196	824.37384	0.37594	0.00015534	-2.7567	-0.0011391	-2.3808	-0.00098372	413.1933424358141	82.469	1.3874	82.896	82.352	83.74	0.42663					91	33	5	0	0	0	0.84341	1	9627	9627		24.203	2.5004	1	2821200			10253	9207	7228	7236	11701	11701					-0.0453719719973833
GDGCDDVGN	9	Unmodified	_GDGCDDVGN_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.2804260253906	2	426.145432	850.276311	-0.94995	-0.00040482	3.032	0.0012921	2.082	0.00088723	426.1453921100326	62.342	0.63649	62.358	62.121	62.757	0.015724					58	29	3	0	0	0	0.20789	1	5425	5425		14.137	3.9524	1	85992	+		10254	16824	7229	7237	11702	11702					-0.1548163086653176
GDGHLMEP	8	Unmodified	_GDGHLMEP_					0	0	0			REV__ENSG00000196950|ENST00000359634|SLC39A10	REV__ENSG00000196950|ENST00000359634|SLC39A10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.1892395019531	2	428.186903	854.359253	1.3941	0.00059693	3.0677	0.0013135	4.4618	0.0019105	428.18814561679375	93.816	1.6244	94.257	93.23	94.854	0.441					80	42	2	0	0	0	0.88944	1	11179	11179		57.811	20.783	1	1318500	+		10255	23184	7230	7238	11703	11703					-0.0737526934788093
GDGHLMEP	8	Unmodified	_GDGHLMEP_					0	0	0			REV__ENSG00000196950|ENST00000359634|SLC39A10	REV__ENSG00000196950|ENST00000359634|SLC39A10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	428.186903	854.359253	-1.6626	-0.00071188	6.4344	0.0027551	4.7719	0.0020433	428.1895392788188	93.706	0.95874	93.934	93.159	94.118	0.22863	-0.14414	0.0022437	NaN	57.811	33	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	350010	+		10256	23184	7230	7238							-0.0737526934788093
GDGHLMEP	8	Unmodified	_GDGHLMEP_					0	0	0			REV__ENSG00000196950|ENST00000359634|SLC39A10	REV__ENSG00000196950|ENST00000359634|SLC39A10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	428.186903	854.359253	0.67127	0.00028743	4.1435	0.0017742	4.8147	0.0020616	428.18858806071137	93.863	0.54701	94.024	93.618	94.165	0.16118	-0.054036	0.00028176	NaN	57.811	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	345670	+		10257	23184	7230	7238							-0.0737526934788093
GDGHLMEP	8	Unmodified	_GDGHLMEP_					0	0	0			REV__ENSG00000196950|ENST00000359634|SLC39A10	REV__ENSG00000196950|ENST00000359634|SLC39A10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	428.186903	854.359253	-1.85	-0.00079216	6.4026	0.0027415	4.5526	0.0019494	428.1895452175455	93.9	0.80228	94.098	93.482	94.285	0.19827	0.019402	0.0022164	NaN	57.811	34	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	362280	+		10258	23184	7230	7238							-0.0737526934788093
GDGPPAHMA	9	Unmodified	_GDGPPAHMA_					0	0	0		ENSG00000278803|ENST00000458091|PWWP4	ENSG00000278803|ENST00000458091|PWWP4	ENSG00000278803|ENST00000458091|PWWP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.179931640625	2	426.68707	851.359587	1.7683	0.00075453	2.1747	0.00092794	3.9431	0.0016825	426.68797892385857	98.722	0.52067	99.098	98.783	99.304	0.37679					24	12	3	0	0	0	0.20789	1	11932	11932		12.207	0	1	236830			10259	9035	7231	7239	11704	11704					-0.07203849628024273
GDGPRLGLL	9	Unmodified	_GDGPRLGLL_					0	0	0		ENSG00000177383|ENST00000317897|MAGEF1	ENSG00000177383|ENST00000317897|MAGEF1	ENSG00000177383|ENST00000317897|MAGEF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2618103027344	2	449.261259	896.507966	0.49762	0.00022356	-1.9183	-0.00086184	-1.4207	-0.00063828	449.260034439117	72.458	0.67605	72.588	72.308	72.984	0.13063					46	23	3	0	0	0	0.7932	1	6660	6660		26.693	2.4902	1	180930			10260	7136	7232	7240	11705	11705					0.055572046173210765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.2362976074219	2	484.235242	966.45593	-0.090856	-4.3996E-05	2.0038	0.00097031	1.913	0.00092632	484.2361457331885	85.202	0.6129	85.269	84.853	85.466	0.067261					42	13	4	0	0	0	0.88944	1	8543	8543		57.811	11.859	1	1388800	+		10261	20437;29946	7233	7241	11706	11706					-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.236328125	2	484.235242	966.45593	-0.090812	-4.3974E-05	2.0414	0.00098853	1.9506	0.00094456	484.23629485715105	85.756	1.1553	85.823	85.466	86.622	0.067261					89	26	5	0	0	0	0.73851	1	8619	8619		65.803	10.299	1	4298800	+		10262	20437;29946	7233	7241	11707	11707					-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.2362365722656	2	484.235242	966.45593	0.95992	0.00046483	1.1273	0.0005459	2.0873	0.0010107	484.2358049256192	85.92	1.1941	85.847	85.495	86.689	-0.073761					90	27	5	0	0	0	0.67263	2	8842	8819;8842		68.485	5.5092	1	3982900	+		10263	20437;29946	7233	7241	11708;11709	11709					-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.23614501953125	2	484.235242	966.45593	-0.75652	-0.00036633	1.8777	0.00090925	1.1212	0.00054292	484.23644502490174	86.636	1.0537	86.83	86.094	87.148	0.19379					82	24	5	0	0	0	0.88944	2	8537	8518;8537		57.811	2.3071	1	4414800	+		10264	20437;29946	7233	7241	11710;11711	11711					-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.2361755371094	2	484.235242	966.45593	0.64492	0.00031229	0.99938	0.00048394	1.6443	0.00079623	484.2357261388031	84.984	0.56373	85.133	84.777	85.34	0.14857					41	12	4	0	0	0	0.90465	2	8279	8279;8301		50.025	7.0796	1	1640500	+		10265	20437;29946	7233	7241	11712;11713	11712					-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.2367858886719	2	484.235242	966.45593	0.65008	0.00031479	1.6466	0.00079733	2.2967	0.0011121	484.23610614821564	85.519	1.189	85.667	85.254	86.442	0.14857					84	27	5	0	0	0	0.88944	1	8384	8384		57.811	11.859	1	7052700	+		10266	20437;29946	7233	7241	11714	11714					-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.236083984375	2	484.235242	966.45593	-0.25899	-0.00012541	1.9723	0.00095505	1.7133	0.00082964	484.2362631686429	84.254	0.98042	84.689	83.918	84.898	0.43537					86	23	5	0	0	0	0.73851	1	9777	9777		65.803	5.5092	1	12890000	+		10267	20437;29946	7233	7241	11715	11715					-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2360534667969	2	484.235242	966.45593	-0.10809	-5.2342E-05	0.70974	0.00034368	0.60165	0.00029134	484.2359966972615	84.849	1.21	85.289	84.903	86.113	0.43967					128	29	6	0	0	0	0.67263	3	9907	9849;9907;9919		68.485	8.3697	1	48653000	+		10268	20437;29946	7233	7241	11716;11717;11718	11717					-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.23614501953125	2	484.235242	966.45593	0.39552	0.00019152	1.1289	0.00054667	1.5245	0.0007382	484.23583864352696	86.77	1.4541	87.217	86.978	88.432	0.44629					87	34	4	0	0	0	0.88944	1	10153	10153		57.811	7.7867	1	8816400	+		10269	20437;29946	7233	7241	11719	11719					-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2363586425781	2	484.235242	966.45593	-0.37908	-0.00018357	1.9463	0.00094247	1.5672	0.00075891	484.2364959781966	84.251	0.72864	84.698	84.224	84.952	0.44736					63	17	5	0	0	0	0.67263	1	9845	9845		68.485	12.98	1	11473000	+		10270	20437;29946	7233	7241	11720	11720					-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2391662597656	2	484.235242	966.45593	-0.53754	-0.00026029	1.2282	0.00059475	0.69069	0.00033445	484.2362894528465	84.849	1.2824	85.296	84.912	86.194	0.44736					130	31	5	0	0	0	0.88944	2	9883	9883;9964		57.811	3.205	1	48085000	+		10271	20437;29946	7233	7241	11721;11722	11721					-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	484.235242	966.45593	-1.0515	-0.00050917	3.3005	0.0015982	2.249	0.001089	484.23680422592264	85.907	0.93958	85.907	85.577	86.517	0	0.15903	0.00076546	NaN	68.485	61	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	933980	+		10272	20437;29946	7233	7241							-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	484.235242	966.45593	-0.090812	-4.3974E-05	2.0414	0.00098853	1.9506	0.00094456	484.23629485715105	85.756	1.1553	85.823	85.466	86.622	0.067261	0.075588	-0.00045389	NaN	68.485	89	26	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4298800	+		10273	20437;29946	7233	7241							-0.028639587964448765
GDHDPKLW	8	Unmodified	_GDHDPKLW_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	484.235242	966.45593	0.95992	0.00046483	1.1273	0.0005459	2.0873	0.0010107	484.2358049256192	85.92	1.1941	85.847	85.495	86.689	-0.073761	0.098939	-0.0013392	NaN	68.485	90	27	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3982900	+		10274	20437;29946	7233	7241							-0.028639587964448765
GDIEKNEY	8	Unmodified	_GDIEKNEY_					0	0	0			REV__nc|ENSG00000060718|P12107-2|COL11A1	REV__nc|ENSG00000060718|P12107-2|COL11A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2366638183594	2	484.221997	966.429441	-0.36764	-0.00017802	-0.44885	-0.00021734	-0.81649	-0.00039536	484.22128192370104	84.19	0.19562	84.637	84.557	84.752	0.44736					6	4	2	0	0	0	0.4196	1	9820	9820		49.442	25.239	1	69691	+		10275	15406	7234	7242	11723	11723					-0.05511692478432906
GDIPEGYS	8	Unmodified	_GDIPEGYS_					0	0	0		nc|ENSG00000211753|A0A5B6|TRBV28	nc|ENSG00000211753|A0A5B6|TRBV28	nc|ENSG00000211753|A0A5B6|TRBV28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.18560791015625	2	419.184883	836.355213	-1.8892	-0.00079194	-1.185	-0.00049672	-3.0742	-0.0012887	419.1843404237986	100.11	1.0511	100.28	99.803	100.85	0.172					47	23	3	0	0	0	0.90465	1	10400	10400		40.573	11.403	1	376750			10276	15235	7235	7243	11724	11724					-0.06951035569943542
GDIPEGYS	8	Unmodified	_GDIPEGYS_					0	0	0		nc|ENSG00000211753|A0A5B6|TRBV28	nc|ENSG00000211753|A0A5B6|TRBV28	nc|ENSG00000211753|A0A5B6|TRBV28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1837463378906	2	419.184883	836.355213	-0.57397	-0.0002406	-3.0028	-0.0012587	-3.5768	-0.0014993	419.1838227050264	86.505	1.1853	86.959	86.534	87.719	0.4543					81	28	5	0	0	0	0.87922	1	10170	10170		31.955	2.8053	1	2728000			10277	15235	7235	7243	11725	11725					-0.06951035569943542
GDIPEGYS	8	Unmodified	_GDIPEGYS_					0	0	0		nc|ENSG00000211753|A0A5B6|TRBV28	nc|ENSG00000211753|A0A5B6|TRBV28	nc|ENSG00000211753|A0A5B6|TRBV28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.183837890625	2	419.184883	836.355213	-0.61734	-0.00025878	-3.4208	-0.0014339	-4.0381	-0.0016927	419.18379974001596	92.26	1.9431	92.723	91.934	93.877	0.46249					113	45	4	0	0	0	0.91005	1	11052	11052		42.474	0	1	2961200			10278	15235	7235	7243	11726	11726					-0.06951035569943542
GDIPGVRFK	9	Unmodified	_GDIPGVRFK_					0	0	0		ENST00000429775.2_1_X:70182861-70183140:+|nuORF;ENSG00000186468|ENST00000296674|RPS23	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7796630859375	2	494.782359	987.550165	-1.0037	-0.00049663	-3.3955	-0.00168	-4.3992	-0.0021767	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.78983	1	8462	8462		27.882	2.4321	1	265620			10279	7797	7236	7244	11727	11727					0.05589180025708629
GDKKWIIHLK	10	Unmodified	_GDKKWIIHLK_					0	0	0			REV__nc|ENSG00000069188|Q58EX2-2|SDK2	REV__nc|ENSG00000069188|Q58EX2-2|SDK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.373291015625	2	619.374415	1236.73428	-0.31167	-0.00019304	-2.5734	-0.0015939	-2.885	-0.0017869	619.3734435178485	101.78	1.7281	101.8	101.4	103.13	0.01989					94	41	4	0	0	0	0.86471	1	10929	10929		30.318	2.4355	1	3076000	+		10280	16576	7237	7245	11728	11728					0.1253794845642915
GDKLPIRGIKR	11	Unmodified	_GDKLPIRGIKR_					0	0	0			REV__nc|ENSG00000169851|O60245|PCDH7	REV__nc|ENSG00000169851|O60245|PCDH7	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.26593017578125	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.039	1	49.947	49.447	50.447	-0.091797								0	0	0	0.56276	1	3909	3909		17.167	1.2461	1		+		10281	21605	7238	7246	11729	11729					0.16172138233696387
GDKRGVKG	8	Unmodified	_GDKRGVKG_					0	0	0			REV__nc|ENSG00000168066|Q15637-4|SF1	REV__nc|ENSG00000168066|Q15637-4|SF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.7403259277344	2	408.737951	815.46135	1.2573	0.00051389	3.1459	0.0012858	4.4031	0.0017997	408.73920372763826	34.848	1.9965	35.229	34.977	36.973	0.3812					122	50	4	0	0	0	0.89962	1	2660	2660		38.806	0	1	5754800	+		10282	21458	7239	7247	11730	11730					0.04623764786060747
GDKSSKCT	8	Unmodified	_GDKSSKCT_					0	0	0			REV__ENSG00000198796|ENST00000361673|ALPK2	REV__ENSG00000198796|ENST00000361673|ALPK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1937561035156	2	413.192185	824.369817	0.37594	0.00015534	2.1112	0.00087232	2.4871	0.0010277	413.1933424358141	82.469	1.3874	82.896	82.352	83.74	0.42663					91	33	5	0	0	0	0.82658	2	9536	9536;9548		32.812	0.85756	1	2821200	+		10283	23385	7240	7248	11731;11732	11731					-0.049392866934454105
GDKVKCFH	8	Unmodified	_GDKVKCFH_					0	0	0		ENST00000468691.5_1_X:122993752-123026581:+|nuORF;ENST00000497906.5_1_X:122993701-123026581:+|nuORF;ENSG00000101966|ENST00000371199|XIAP	ENST00000468691.5_1_X:122993752-123026581:+|nuORF	ENST00000468691.5_1_X:122993752-123026581:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.23663330078125	2	467.234187	932.453822	-1.0397	-0.00048579	-0.76539	-0.00035762	-1.8051	-0.0008434	467.23372611150774	69.413	2.1998	69.548	69.082	71.282	0.13522					162	104	3	0	0	0	0.884	1	6354	6354		33.516	0	1	8546900			10284	1974	7241	7249	11733	11733					-0.01510710805882809
GDLASLRA	8	Unmodified	_GDLASLRA_					0	0	0		nc|ENSG00000102524|Q9Y275-3|TNFSF13B;nc|ENSG00000102524|Q9Y275-2|TNFSF13B;ENSG00000102524|ENST00000375887|TNFSF13B	nc|ENSG00000102524|Q9Y275-3|TNFSF13B	nc|ENSG00000102524|Q9Y275-3|TNFSF13B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.2128601074219	2	401.72451	801.434466	-0.33943	-0.00013636	-0.21414	-8.6025E-05	-0.55357	-0.00022238	401.7247935035527	30.256	0.90003	30.208	29.675	30.575	-0.047062					28	20	2	0	0	0	0.4196	1	1587	1587		6.3127	0	1	46128			10285	2006	7242	7250	11734	11734					0.025806561748481727
GDLASLRA	8	Unmodified	_GDLASLRA_					0	0	0		nc|ENSG00000102524|Q9Y275-3|TNFSF13B;nc|ENSG00000102524|Q9Y275-2|TNFSF13B;ENSG00000102524|ENST00000375887|TNFSF13B	nc|ENSG00000102524|Q9Y275-3|TNFSF13B	nc|ENSG00000102524|Q9Y275-3|TNFSF13B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	401.72451	801.434466	0.13391	5.3795E-05	1.7537	0.00070451	1.8876	0.0007583	401.724339410268	30.027	0.32671	30.039	29.844	30.17	0.01123	-0.099656	0.0026682	NaN	6.3127	19	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45666			10286	2006	7242	7250							0.025806561748481727
GDLFVDDR	8	Unmodified	_GDLFVDDR_					0	0	0			REV__nc|ENSG00000105778|Q8NBF6-2|AVL9	REV__nc|ENSG00000105778|Q8NBF6-2|AVL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.722900390625	2	468.724707	935.43486	-0.82424	-0.00038634	-2.2118	-0.0010367	-3.036	-0.0014231	468.7236330503741	70.3	0.63596	70.262	70.051	70.687	-0.037865					55	33	2	0	0	0	0.8621	2	6831	6812;6831		45.952	5.1738	1	322340	+		10287	17569	7243	7251	11735;11736	11736					-0.03543968895951366
GDLFVDDR	8	Unmodified	_GDLFVDDR_					0	0	0			REV__nc|ENSG00000105778|Q8NBF6-2|AVL9	REV__nc|ENSG00000105778|Q8NBF6-2|AVL9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.7212829589844	2	468.724707	935.43486	-1.0822	-0.00050726	-1.9959	-0.00093555	-3.0782	-0.0014428	468.7236147293877	70.106	0.76979	70.177	69.93	70.7	0.071037					66	37	3	0	0	0	0.90523	1	6370	6370		40.778	1.5253	1	1251800	+		10288	17569	7243	7251	11737	11737					-0.03543968895951366
GDLFVEVK	8	Unmodified	_GDLFVEVK_					0	0	0			REV__ENSG00000101323|ENST00000378789|HAO1	REV__ENSG00000101323|ENST00000378789|HAO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7645263671875	2	453.750193	905.485833	-2.9526	-0.0013397	3.9126	0.0017753	0.95994	0.00043557	453.7524459063291	40.899	0.17766	41.291	41.237	41.415	0.39209					6	4	2	0	0	0	0.4196	1	3542	3542		23.042	0	1	264610	+		10289	17265	7244	7252	11738	11738					0.029309801489034726
GDLKGRGR	8	Unmodified	_GDLKGRGR_					0	0	0		ENSG00000204564|ENST00000651131|C6orf136	ENSG00000204564|ENST00000651131|C6orf136	ENSG00000204564|ENST00000651131|C6orf136	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7506408691406	2	429.74885	857.483148	1.5892	0.00068294	2.5388	0.001091	4.128	0.001774	429.74995933180253	34.855	1.9588	35.237	34.934	36.893	0.3812					144	49	4	0	0	0	0.89043	1	2671	2671		35.618	0	1	5947200			10290	8459	7245	7253	11739	11739					0.04870569534602964
GDLLEKVT	8	Unmodified	_GDLLEKVT_					0	0	0			REV__ENST00000536297.1_1_11:72068151-72091331:-|nuORF	REV__ENST00000536297.1_1_11:72068151-72091331:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7676696777344	2	437.74765	873.480748	-1.4925	-0.00065335	0.82795	0.00036243	-0.66458	-0.00029092	437.7478954777767	42.097	0.84296	42.795	42.456	43.299	0.69754					42	20	3	0	0	0	0.4196	1	3759	3759		47.657	9.8458	1	880800	+		10291	20797	7246	7254	11740	11740					0.03894676286279264
GDLLRIGRKAL	11	Unmodified	_GDLLRIGRKAL_					0	0	0		nc|ENSG00000173226|Q15051-3|IQCB1;ENSG00000173226|ENST00000310864|IQCB1	nc|ENSG00000173226|Q15051-3|IQCB1	nc|ENSG00000173226|Q15051-3|IQCB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.5892028808594	3	404.59094	1210.75099	-1.3096	-0.00052987	-2.8286	-0.0011444	-4.1383	-0.0016743	404.5896495246431	39.318	1.9056	39.271	38.511	40.416	-0.047005					116	44	4	0	0	0	0.75457	1	2835	2835		21.032	0.19508	1	380940			10292	6842	7247	7255	11741	11741					0.15404449342372573
GDLMHDPA	8	Unmodified	_GDLMHDPA_					0	0	0		nc|ENSG00000149179|Q9H6J7-3|CSTPP1;ENST00000525895.5_1_11:46958334-47183186:+|nuORF;nc|ENSG00000149179|Q9H6J7-4|CSTPP1;ENSG00000149179|ENST00000278460|CSTPP1;nc|ENSG00000149179|Q9H6J7-2|CSTPP1	nc|ENSG00000149179|Q9H6J7-3|CSTPP1	nc|ENSG00000149179|Q9H6J7-3|CSTPP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.1890563964844	2	428.186903	854.359253	1.3941	0.00059693	3.0677	0.0013135	4.4618	0.0019105	428.18814561679375	93.816	1.6244	94.257	93.23	94.854	0.441					80	42	2	0	0	0	0.88915	1	11166	11166		35.201	8.4046	1	1318500			10293	5002	7248	7256	11742	11742					-0.07375269347892299
GDLPLGGRL	9	Unmodified	_GDLPLGGRL_					0	0	0			REV__ENSG00000126215|ENST00000555055|XRCC3	REV__ENSG00000126215|ENST00000555055|XRCC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2601623535156	2	449.261259	896.507966	-0.031705	-1.4244E-05	-1.4161	-0.00063622	-1.4478	-0.00065046	449.26046135217877	71.325	1.0336	71.873	71.284	72.317	0.54756					58	24	3	0	0	0	0.78983	1	7970	7970		27.882	2.3082	1	1233100	+		10294	18697	7249	7257	11743	11743					0.05557204617343814
GDLPRNLL	8	Unmodified	_GDLPRNLL_					0	0	0			REV__ENSG00000187091|ENST00000334661|PLCD1	REV__ENSG00000187091|ENST00000334661|PLCD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2606201171875	2	449.261259	896.507966	0.037787	1.6976E-05	-1.6093	-0.00072298	-1.5715	-0.000706	449.260464463793	72.138	1.197	72.688	72.279	73.476	0.55008					69	28	4	0	0	0	0.87922	1	8078	8078		31.955	1.4512	1	1304500	+		10295	22901	7250	7258	11744	11744					0.055572046173210765
GDLQVIRVTDV	11	Unmodified	_GDLQVIRVTDV_					0	0	0		chr16:25169213-25169287|23|10.35|0.04|8.19|+|2|LCMT1,None|1	chr16:25169213-25169287|23|10.35|0.04|8.19|+|2|LCMT1,None|1	chr16:25169213-25169287|23|10.35|0.04|8.19|+|2|LCMT1,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.56500244140625	3	405.562827	1213.66665	0.39528	0.00016031	4.3969	0.0017832	4.7922	0.0019435	405.56450530615757	63.272	1.3532	63.394	62.754	64.107	0.12253					138	58	3	0	0	0	0.74763	1	5539	5539		15.337	0.0043666	1	242080			10296	202	7251	7259	11745	11745					0.0683645373494528
GDLTTLSNI	9	Unmodified	_GDLTTLSNI_					0	0	0		ENSG00000064270|ENST00000262429|ATP2C2;nc|ENSG00000064270|O75185-2|ATP2C2;nc|ENSG00000064270|O75185-3|ATP2C2;ENST00000563340.1_1_16:84456067-84459408:+|nuORF	ENSG00000064270|ENST00000262429|ATP2C2	ENSG00000064270|ENST00000262429|ATP2C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2486572265625	2	467.248015	932.481476	-0.20878	-9.7553E-05	0.37075	0.00017323	0.16197	7.5679E-05	467.24791035184415	64.069	0.72615	64.623	64.256	64.982	0.55444					41	16	3	0	0	0	0.51307	1	6919	6919		51.335	1.3109	1	336490			10297	1099	7252	7260	11746	11746					0.012534709353303697
GDLTYYINV	9	Unmodified	_GDLTYYINV_					0	0	0			REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7813110351562	2	529.263665	1056.51278	0.59764	0.00031631	-1.0818	-0.00057255	-0.48414	-0.00025624	529.262967082129	53.105	1.1562	53.519	53.128	54.284	0.4139					51	27	3	0	0	0	0.20789	1	5320	5320		66.429	31.229	1	1000300	+		10298	16960	7253	7261	11747	11747					-0.013219560305742561
GDPGQIFHP	9	Unmodified	_GDPGQIFHP_					0	0	0		ENST00000367884.6_1_1:165600502-165604990:+|nuORF	ENST00000367884.6_1_1:165600502-165604990:+|nuORF	ENST00000367884.6_1_1:165600502-165604990:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2362976074219	2	484.235242	966.45593	-1.0641	-0.00051528	2.6228	0.0012701	1.5587	0.00075477	484.2366198797029	86.871	1.6056	87.325	87.019	88.625	0.45429					96	38	4	0	0	0	0.64922	1	10210	10210		44.117	3.3386	1	9271700			10299	10572	7254	7262	11748	11748					-0.028639587964335078
GDPGVRRL	8	Unmodified	_GDPGVRRL_					0	0	0		ENSG00000123999|ENST00000243786|INHA	ENSG00000123999|ENST00000243786|INHA	ENSG00000123999|ENST00000243786|INHA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.7541198730469	2	435.251226	868.487899	0.18475	8.0413E-05	1.8989	0.0008265	2.0837	0.00090692	435.25121288017317	76.886	2.3553	77.455	76.392	78.747	0.56836					103	62	3	0	0	0	0.87479	1	8772	8772		30.504	1.3541	1	485820			10300	3297	7255	7263	11749	11749					0.048394536773685104
GDPPPEVSWLK	11	Unmodified	_GDPPPEVSWLK_					0	0	0		nc|ENSG00000101605|P52179-2|MYOM1;ENSG00000101605|ENST00000356443|MYOM1	nc|ENSG00000101605|P52179-2|MYOM1	nc|ENSG00000101605|P52179-2|MYOM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.87957763671875	3	408.880156	1223.61864	-2.1156	-0.00086504	0.68771	0.00028119	-1.4279	-0.00058385	408.8803002562497	23.885	1.1542	23.885	23.413	24.568	0					112	51	3	0	0	0	0.47591	1	810	810		53.597	14.843	1	176940			10301	1952	7256	7264	11750	11750					0.015773798148984497
GDPRRLVP	8	Unmodified	_GDPRRLVP_					0	0	0			REV__chr20:5118866-5118957|17|17.71|0.05|8.34|-|1|PCNA,None|1	REV__chr20:5118866-5118957|17|17.71|0.05|8.34|-|1|PCNA,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.2662658691406	2	455.266876	908.519199	-0.70894	-0.00032276	-0.74748	-0.0003403	-1.4564	-0.00066306	455.26644591079787	38.513	1.1212	39.035	38.593	39.714	0.52235					55	26	3	0	0	0	0.89962	1	3209	3209		38.806	0	1	859060	+		10302	15779	7257	7265	11751	11751					0.06128026711473922
GDPSVPCH	8	Unmodified	_GDPSVPCH_					0	0	0			REV__ENST00000598759.1_1_19:41190048-41190504:-|nuORF	REV__ENST00000598759.1_1_19:41190048-41190504:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.1761474609375	2	406.173795	810.333038	2.4719	0.001004	1.6254	0.00066021	4.0973	0.0016642	406.17475072554515	96.427	1.6527	96.832	96.34	97.993	0.40498					89	39	4	0	0	0	0.89457	1	11560	11560		37.028	0	1	1443200	+		10303	29289	7258	7266	11752	11752					-0.07971538519359456
GDPSVPCH	8	Unmodified	_GDPSVPCH_					0	0	0			REV__ENST00000598759.1_1_19:41190048-41190504:-|nuORF	REV__ENST00000598759.1_1_19:41190048-41190504:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.1761474609375	2	406.173795	810.333038	2.6134	0.0010615	1.5172	0.00061625	4.1306	0.0016778	406.17470361655813	99.321	1.1441	99.683	99.176	100.32	0.36137					76	28	4	0	0	0	0.89457	2	11976	11976;12012		37.028	1.8278	1	2117600	+		10304	29289	7258	7266	11753;11754	11753					-0.07971538519359456
GDPSVPCH	8	Unmodified	_GDPSVPCH_					0	0	0			REV__ENST00000598759.1_1_19:41190048-41190504:-|nuORF	REV__ENST00000598759.1_1_19:41190048-41190504:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.17620849609375	2	406.173795	810.333038	1.6845	0.0006842	2.4464	0.00099367	4.1309	0.0016779	406.1750996382843	99.289	1.0283	99.652	99.329	100.36	0.36292					64	25	4	0	0	0	0.86288	5	12015	12015;12039;12051;12062;12086		54.765	9.3304	1	2334600	+		10305	29289	7258	7266	11755;11756;11757;11758;11759	11755					-0.07971538519359456
GDQGWVGVSLL	11	Unmodified	_GDQGWVGVSLL_					0	0	0			REV__ENST00000528435.5_1_11:118175667-118182938:+|nuORF	REV__ENST00000528435.5_1_11:118175667-118182938:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.797119140625	2	565.795663	1129.57677	0.55994	0.00031681	-0.032546	-1.8414E-05	0.52739	0.0002984	565.7956122725219	67.048	0.93106	67.599	67.315	68.246	0.55071					51	25	3	0	0	0	0.68532	1	7336	7336		33.922	2.2874	1	1292700	+		10306	23397	7259	7267	11760	11760					0.01716824126378924
GDQWLPWK	8	Unmodified	_GDQWLPWK_					0	0	0			REV__ENST00000458001.2_1_13:114546461-114546707:+|nuORF	REV__ENST00000458001.2_1_13:114546461-114546707:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.2598876953125	2	515.261259	1028.50797	0.032082	1.6531E-05	-3.6888	-0.0019007	-3.6567	-0.0018842	515.2593049894326	30.893	0.80307	30.846	30.538	31.341	-0.047062					29	20	2	0	0	0	0.93786	1	1717	1717		53.351	8.9743	1	31227	+		10307	26978	7260	7268	11761	11761					-0.005147953826735829
GDRHSPPGTK	10	Unmodified	_GDRHSPPGTK_					0	0	0		nc|ENSG00000118156|Q9H0D2-2|ZNF541;ENSG00000118156|ENST00000391901|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2674560546875	2	526.267604	1050.52066	1.1325	0.00059601	-2.6027	-0.0013697	-1.4702	-0.0007737	526.2662002748589	23.412	0.60332	23.03	22.762	23.365	-0.38178					30	13	3	0	0	0	0.86446	1	1051	1051		30.569	0.065224	1	214500			10308	3012	7261	7269	11762	11762					-0.0025838399044459948
GDSEILKKQ	9	Unmodified	_GDSEILKKQ_					0	0	0		nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532|DMD;ENSG00000198947|ENST00000357033|DMD	nc|ENSG00000198947|P11532-4|DMD	nc|ENSG00000198947|P11532-4|DMD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.2809143066406	2	509.282389	1016.55022	-0.47785	-0.00024336	-0.11145	-5.676E-05	-0.5893	-0.00030012	509.282322435019	37.001	0.52009	37.024	36.758	37.278	0.023624					20	12	2	0	0	0	0.67345	1	2092	2092		42.396	1.618	1	69941			10309	8378	7262	7270	11763	11763					0.04261135235049096
GDSEILKKQ	9	Unmodified	_GDSEILKKQ_					0	0	0		nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532|DMD;ENSG00000198947|ENST00000357033|DMD	nc|ENSG00000198947|P11532-4|DMD	nc|ENSG00000198947|P11532-4|DMD	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	509.282389	1016.55022	0.23496	0.00011966	-0.33065	-0.00016839	-0.095691	-4.8734E-05	509.2821201468329	36.869	0.44209	36.968	36.672	37.114	0.099274	-0.01035	-0.0012501	NaN	42.396	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	174440			10310	8378	7262	7270							0.04261135235049096
GDSEILKKQ	9	Unmodified	_GDSEILKKQ_					0	0	0		nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532|DMD;ENSG00000198947|ENST00000357033|DMD	nc|ENSG00000198947|P11532-4|DMD	nc|ENSG00000198947|P11532-4|DMD	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	509.282389	1016.55022	0.23231	0.00011831	0.097387	4.9598E-05	0.32969	0.00016791	509.28231856312107	36.986	0.47779	36.926	36.56	37.038	-0.060337	-0.053219	-0.00081413	NaN	42.396	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118410			10311	8378	7262	7270							0.04261135235049096
GDSFYSCCAHL	11	Unmodified	_GDSFYSCCAHL_					0	0	0			REV__ENST00000427704.6_1_6:144150650-144150734:+|nuORF	REV__ENST00000427704.6_1_6:144150650-144150734:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.7341918945312	2	601.733891	1201.45323	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.968	1	28.005	27.505	28.505	0.03607								0	0	0	0.56276	1	1299	1299		34.173	9.9698	1		+		10312	26570	7263	7271	11764	11764					-0.1394391830792756
GDTGRKAK	8	Unmodified	_GDTGRKAK_					0	0	0			REV__ENST00000529805.1_1_11:105867080-105880474:-|nuORF	REV__ENST00000529805.1_1_11:105867080-105880474:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7367248535156	2	416.735409	831.456264	0.069639	2.9021E-05	3.4645	0.0014438	3.5341	0.0014728	416.7368250474704	38.634	0.86422	38.976	38.537	39.401	0.34187					55	20	4	0	0	0	0.89043	1	3193	3193		35.618	2.8059	1	1714900	+		10313	28272	7264	7272	11765	11765					0.0337946092341781
GDTREGFVP	9	Unmodified	_GDTREGFVP_					0	0	0			REV__ENST00000412352.6_1_12:31814856-31815021:+|nuORF	REV__ENST00000412352.6_1_12:31814856-31815021:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.2364196777344	2	489.237981	976.461409	-0.71864	-0.00035159	-2.5032	-0.0012247	-3.2218	-0.0015762	489.2367667655941	86.159	1.8924	86.606	85.945	87.837	0.44736					116	45	5	0	0	0	0.71772	1	10139	10139		39.253	1.4413	1	3138400	+		10314	26379	7265	7273	11766	11766					-0.02776280004616183
GDTSEEIG	8	Unmodified	_GDTSEEIG_					0	0	0			REV__nc|ENSG00000161813|Q71RC2-7|LARP4	REV__nc|ENSG00000161813|Q71RC2-7|LARP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.170166015625	2	404.171973	806.329392	-1.318	-0.00053271	-3.7027	-0.0014965	-5.0207	-0.0020292	404.1707263168683	78.641	1.8199	78.641	78.235	80.055	0					146	66	5	0	0	0	0.884	1	7177	7177		33.516	4.366	1	3046600	+		10315	20781	7266	7274	11767	11767					-0.0815192981222026
GDVARPGLL	9	Unmodified	_GDVARPGLL_					0	0	0			REV__ENST00000562435.5_1_16:47165930-47177876:-|nuORF	REV__ENST00000562435.5_1_16:47165930-47177876:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.26116943359375	2	449.261259	896.507966	0.086224	3.8737E-05	-2.0246	-0.00090958	-1.9384	-0.00087084	449.2601788042096	68.841	0.73721	68.874	68.516	69.253	0.033005					47	30	2	0	0	0	0.77696	1	6566	6566		31.53	1.0262	1	184640	+		10316	28799	7267	7275	11768	11768					0.05557204617343814
GDVKALTVVM	10	Unmodified	_GDVKALTVVM_					0	0	0			REV__ENST00000482665.1_1_16:334415-335240:+|nuORF	REV__ENST00000482665.1_1_16:334415-335240:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7919311523438	2	516.791535	1031.56852	-0.27573	-0.0001425	3.8092	0.0019686	3.5335	0.0018261	516.7933490368572	86.056	2.7275	86.241	84.67	87.398	0.18523					138	63	3	0	0	0	0.86587	1	8564	8564		29.17	0.020503	1	324400	+		10317	27470	7268	7276	11769	11769					0.053995538853769176
GDVLQVVL	8	Unmodified	_GDVLQVVL_					0	0	0			REV__nc|ENSG00000138650|Q9P2E7-2|PCDH10	REV__nc|ENSG00000138650|Q9P2E7-2|PCDH10	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.75140380859375	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.755	1	76.844	76.344	77.344	0.089363								0	0	0	0.29245	1	7163	7163		30.504	3.7075	1		+		10318	19489	7269	7277	11770	11770					0.06383284011531032
GDVLSLAPK	9	Unmodified	_GDVLSLAPK_					0	0	0		ENSG00000128645|ENST00000331462|HOXD1	ENSG00000128645|ENST00000331462|HOXD1	ENSG00000128645|ENST00000331462|HOXD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.26300048828125	2	450.263468	898.512382	0.39557	0.00017811	-0.049026	-2.2075E-05	0.34654	0.00015603	450.26326803543515	29.807	1.2073	29.718	29.191	30.398	-0.089544					38	27	2	0	0	0	0.41566	1	1930	1930		56.721	1.9447	1	338790			10319	3557	7270	7278	11771	11771					0.05906669040234647
GDVPKQEKGKE	11	Unmodified	_GDVPKQEKGKE_					0	0	0		nc|ENSG00000198771|Q6JBY9-2|RCSD1;ENSG00000198771|ENST00000367854|RCSD1	nc|ENSG00000198771|Q6JBY9-2|RCSD1	nc|ENSG00000198771|Q6JBY9-2|RCSD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.552490234375	3	405.550698	1213.63027	0.59269	0.00024037	3.9709	0.0016104	4.5636	0.0018508	405.5523269463935	28.869	3.2114	28.696	27.713	30.924	-0.17336					183	75	5	0	0	0	0.68532	1	1755	1755		30.139	0	1	9724600			10320	8328	7271	7279	11772	11772					0.031995768382330425
GDVVSSYIIKK	11	Unmodified	_GDVVSSYIIKK_					0	0	0			REV__chr1:108657574-108659864|13|10.31|0.09|6.88|-|1|None,HENMT1|1	REV__chr1:108657574-108659864|13|10.31|0.09|6.88|-|1|None,HENMT1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.8471069335938	2	604.847896	1207.68124	1.0466	0.00063305	-3.8391	-0.0023221	-2.7925	-0.001689	604.845452875801	96.207	3.1756	96.438	95.308	98.483	0.23103					209	74	4	0	0	0	0.69995	1	9962	9962		31.53	7.0106	1	585990	+		10321	15407	7272	7280	11773	11773					0.08570525883078517
GEADIQTVAVV	11	Unmodified	_GEADIQTVAVV_					0	0	0			REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	551.3098754882812	2	551.292953	1100.57135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.871	1	43.813	43.313	44.313	-0.058262								0	0	0	0.56276	1	3052	3052		36.447	2.2742	1		+		10322	18153	7273	7281	11774	11774					0.025091005438980574
GEADRPGTY	9	Unmodified	_GEADRPGTY_					0	0	0			REV__ENST00000482665.1_1_16:334415-335240:+|nuORF	REV__ENST00000482665.1_1_16:334415-335240:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.2186279296875	2	483.219788	964.425024	-1.3332	-0.00064422	-1.4966	-0.00072319	-2.8298	-0.0013674	483.21893271772785	91.68	1.3061	92.143	91.352	92.658	0.46249					56	30	2	0	0	0	0.78058	1	10920	10920		30.504	3.4563	1	349990	+		10323	27470	7274	7282	11775	11775					-0.05861156901335107
GEAEKQKQL	9	Unmodified	_GEAEKQKQL_					0	0	0			REV__ENSG00000197587|ENST00000360032|DMBX1	REV__ENSG00000197587|ENST00000360032|DMBX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2642822265625	2	515.780013	1029.54547	-0.80028	-0.00041277	-0.10908	-5.6259E-05	-0.90936	-0.00046903	515.7800607594681	44.814	0.57603	45.659	45.419	45.995	0.84437					21	13	2	0	0	0	0.20789	1	4190	4190		44.377	1.9027	1	411770	+		10324	23250	7275	7283	11776	11776					0.03188251092274186
GEALELLPV	9	Unmodified	_GEALELLPV_					0	0	0			REV__nc|ENSG00000139350|Q8NHV4-3|NEDD1	REV__nc|ENSG00000139350|Q8NHV4-3|NEDD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7696228027344	2	470.771126	939.527698	-0.46989	-0.00022121	-4.4465	-0.0020933	-4.9164	-0.0023145	470.768898093518	52.94	1.6168	52.866	52.471	54.088	-0.074509					101	42	3	0	0	0	0.69914	1	4390	4390		40.573	10.069	1	1875900	+		10325	19535	7276	7284	11777	11777					0.0555153583743504
GEALILLVV	9	Unmodified	_GEALILLVV_					0	0	0		ENST00000503010.1_1_5:114951908-114961566:-|nuORF;ENSG00000134970|ENST00000456936|TMED7	ENST00000503010.1_1_5:114951908-114961566:-|nuORF	ENST00000503010.1_1_5:114951908-114961566:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8012390136719	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.7932	1	3592	3592		25.45	8.0852	1	251610			10326	3975	7277	7285	11778	11778					0.11905003113804469
GEANGVWKY	9	Unmodified	_GEANGVWKY_					0	0	0		nc|ENSG00000119777|Q6NUQ4-2|TMEM214;ENSG00000119777|ENST00000238788|TMEM214;ENST00000495312.1_1_2:27255799-27258254:+|nuORF	nc|ENSG00000119777|Q6NUQ4-2|TMEM214	nc|ENSG00000119777|Q6NUQ4-2|TMEM214	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2490844726562	2	512.248349	1022.48214	0.20116	0.00010304	-0.54709	-0.00028025	-0.34594	-0.0001772	512.2478040699564	46.693	0.51127	46.679	46.438	46.949	-0.013821					26	13	3	0	0	0	0.51307	1	3756	3756		51.335	3.4199	1	161080			10327	3095	7278	7286	11779	11779					-0.028196896249596648
GEANGVWKY	9	Unmodified	_GEANGVWKY_					0	0	0		nc|ENSG00000119777|Q6NUQ4-2|TMEM214;ENSG00000119777|ENST00000238788|TMEM214;ENST00000495312.1_1_2:27255799-27258254:+|nuORF	nc|ENSG00000119777|Q6NUQ4-2|TMEM214	nc|ENSG00000119777|Q6NUQ4-2|TMEM214	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2483520507812	2	512.248349	1022.48214	-0.57502	-0.00029455	-0.7295	-0.00037369	-1.3045	-0.00066824	512.2482070561316	46.636	0.62689	46.607	46.355	46.981	-0.028782					24	14	3	0	0	0	0.18601	1	3853	3853		76.774	12.567	1	202660			10328	3095	7278	7286	11780	11780					-0.028196896249596648
GEANLKEI	8	Unmodified	_GEANLKEI_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2346496582031	2	437.23745	872.460347	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.204	1	60.321	59.821	60.821	0.11676								0	0	0	0.3055	1	5207	5207		44.117	0	1				10329	8219	7279	7287	11781	11781					0.019015056264720442
GEARLADAM	9	Unmodified	_GEARLADAM_					0	0	0			REV__ENST00000278353.9_2_11:43702131-43702218:+|nuORF	REV__ENST00000278353.9_2_11:43702131-43702218:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2265930175781	2	467.226559	932.438566	-1.0001	-0.00046727	1.2477	0.00058294	0.24757	0.00011567	467.22696183985306	31.326	0.69073	31.406	31.165	31.856	0.079834					35	15	3	0	0	0	0.41566	1	2108	2108		56.721	0.28726	1	1186600	+		10330	24591	7280	7288	11782	11782					-0.03035622393747417
GEASVSVLL	9	Unmodified	_GEASVSVLL_					0	0	0			REV__nc|ENSG00000074855|Q9HCE9-2|ANO8	REV__nc|ENSG00000074855|Q9HCE9-2|ANO8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26336669921875	2	437.74765	873.480748	-1.5956	-0.00069846	3.2689	0.001431	1.6734	0.00073252	437.7482166074296	35.291	0.40015	35.329	35.149	35.549	0.038643					16	13	2	0	0	0	0.20789	1	1864	1864		35.618	0	1	120040	+		10331	16697	7281	7289	11783	11783					0.03894676286302001
GEAWCAKGR	9	Unmodified	_GEAWCAKGR_					0	0	0			REV__chr19:17779232-17781231|31|27.94|0.0|12.51|+|1|TE_info:L2a,L2a_dup157553,L2,LINE,donor,-,17778935,17779232|None,FCHO1|9	REV__chr19:17779232-17781231|31|27.94|0.0|12.51|+|1|TE_info:L2a,L2a_dup157553,L2,LINE,donor,-,17778935,17779232|None,FCHO1|9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.2366943359375	2	489.234719	976.454884	-0.084852	-4.1512E-05	4.1276	0.0020194	4.0428	0.0019779	489.23659515743003	63.847	1.1575	63.846	63.508	64.665	-0.00078583					92	41	3	0	0	0	0.77696	1	5934	5934		31.53	1.0262	1	760060	+		10332	15685	7282	7290	11784	11784					-0.03428496436981732
GEDEPLHAL	9	Unmodified	_GEDEPLHAL_					0	0	0		nc|ENSG00000168066|Q15637-6|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-7|SF1;nc|ENSG00000168066|Q15637-3|SF1;nc|ENSG00000168066|Q15637-2|SF1;ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-5|SF1	nc|ENSG00000168066|Q15637-6|SF1	nc|ENSG00000168066|Q15637-6|SF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.7371520996094	2	490.737814	979.461075	-1.1142	-0.00054679	0.69144	0.00033932	-0.42278	-0.00020747	490.7380104312406	46.261	0.64522	46.732	46.375	47.021	0.47139					37	15	3	0	0	0	6.0414E-05	3	4352	4340;4352;4364		148.21	46.605	1	2881400			10333	15077	7283	7291	11785;11786;11787	11786					-0.02947699724472841
GEDEPLHAL	9	Unmodified	_GEDEPLHAL_					0	0	0		nc|ENSG00000168066|Q15637-6|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-7|SF1;nc|ENSG00000168066|Q15637-3|SF1;nc|ENSG00000168066|Q15637-2|SF1;ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-5|SF1	nc|ENSG00000168066|Q15637-6|SF1	nc|ENSG00000168066|Q15637-6|SF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.73736572265625	2	490.737814	979.461075	-0.87703	-0.00043039	0.22693	0.00011136	-0.6501	-0.00031903	490.7377645473262	46.035	0.63935	46.931	46.647	47.287	0.89542					42	15	4	0	0	0	3.8835E-29	3	4322	4322;4333;4345		190.71	108.4	1	2964900			10334	15077	7283	7291	11788;11789;11790	11788					-0.02947699724472841
GEDIPREML	9	Unmodified	_GEDIPREML_					0	0	0		chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1;ENSG00000144711|ENST00000613206|IQSEC1;nc|ENSG00000144711|Q6DN90-2|IQSEC1;nc|ENSG00000144711|Q6DN90|IQSEC1	chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1	chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2620239257812	2	530.260599	1058.50665	0.88642	0.00047004	-1.5161	-0.00080395	-0.62972	-0.00033392	530.2597335184702	53.808	0.67089	54.222	53.994	54.665	0.4139					26	15	2	0	0	0	0.29259	2	5458	5448;5458		65.465	13.938	1	1698200			10335	389	7284	7292	11791;11792	11792					-0.020267975337446842
GEDIPREML	9	Unmodified	_GEDIPREML_					0	0	0		chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1;ENSG00000144711|ENST00000613206|IQSEC1;nc|ENSG00000144711|Q6DN90-2|IQSEC1;nc|ENSG00000144711|Q6DN90|IQSEC1	chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1	chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.261474609375	2	530.260599	1058.50665	-0.24844	-0.00013174	-0.48673	-0.00025809	-0.73517	-0.00038983	530.2602855992136	53.601	0.83599	54.185	53.872	54.708	0.58474					30	19	2	0	0	0	0.19437	3	5457	5433;5443;5457		75.043	14.071	1	1980700			10336	389	7284	7292	11793;11794;11795	11795					-0.020267975337446842
GEDLEKVTL	9	Unmodified	_GEDLEKVTL_					0	0	0		ENST00000470876.1_1_5:133900168-133909634:+|nuORF;nc|ENSG00000043143|Q9NQC1-3|JADE2;nc|ENSG00000043143|Q9NQC1-2|JADE2;nc|ENSG00000043143|Q9NQC1|JADE2;ENSG00000043143|ENST00000681547|JADE2	ENST00000470876.1_1_5:133900168-133909634:+|nuORF	ENST00000470876.1_1_5:133900168-133909634:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.2692565917969	2	502.268947	1002.52334	-0.52866	-0.00026553	0.4442	0.00022311	-0.084468	-4.2426E-05	502.2690148841243	51.942	0.70155	52.366	52.021	52.723	0.42348					38	16	4	0	0	0	0.076066	2	5174	5174;5185		98.582	16.823	1	1133000			10337	941	7285	7293	11796;11797	11796					0.02218026623870628
GEDLEKVTL	9	Unmodified	_GEDLEKVTL_					0	0	0		ENST00000470876.1_1_5:133900168-133909634:+|nuORF;nc|ENSG00000043143|Q9NQC1-3|JADE2;nc|ENSG00000043143|Q9NQC1-2|JADE2;nc|ENSG00000043143|Q9NQC1|JADE2;ENSG00000043143|ENST00000681547|JADE2	ENST00000470876.1_1_5:133900168-133909634:+|nuORF	ENST00000470876.1_1_5:133900168-133909634:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.26910400390625	2	502.268947	1002.52334	0.82484	0.00041429	-1.2448	-0.00062523	-0.41997	-0.00021094	502.26830266193906	51.696	0.53193	52.363	52.105	52.637	0.66729					27	12	3	0	0	0	0.094633	2	5169	5158;5169		93.598	32.626	1	1056200			10338	941	7285	7293	11798;11799	11799					0.02218026623870628
GEDNDHLQL	9	Unmodified	_GEDNDHLQL_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.28173828125	2	520.735803	1039.45705	-0.82894	-0.00043166	-0.10505	-5.4704E-05	-0.934	-0.00048636	520.7357660272988	42.788	0.53646	43.222	42.966	43.502	0.4334					35	12	4	0	0	0	0.20789	1	3845	3845		74.255	19.479	1	601640			10339	8381	7286	7294	11800	11800					-0.061097892181805946
GEDREATGVLL	11	Unmodified	_GEDREATGVLL_					0	0	0		nc|ENSG00000196235|O00267-2|SUPT5H;ENSG00000196235|ENST00000432763|SUPT5H;ENST00000600818.1_1_19:39966660-39967036:+|nuORF	nc|ENSG00000196235|O00267-2|SUPT5H	nc|ENSG00000196235|O00267-2|SUPT5H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.3014526367188	2	580.30131	1158.58807	-1.0225	-0.00059338	1.173	0.00068072	0.1505	8.7338E-05	580.3018900215803	49.757	0.90461	50.205	49.694	50.599	0.44761					49	21	3	0	0	0	0.13891	1	4866	4866		83.647	15.162	1	2020100			10340	8031	7287	7295	11801	11801					0.0151160142986555
GEDREATGVLL	11	Unmodified	_GEDREATGVLL_					0	0	0		nc|ENSG00000196235|O00267-2|SUPT5H;ENSG00000196235|ENST00000432763|SUPT5H;ENST00000600818.1_1_19:39966660-39967036:+|nuORF	nc|ENSG00000196235|O00267-2|SUPT5H	nc|ENSG00000196235|O00267-2|SUPT5H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.3020629882812	2	580.30131	1158.58807	-0.047463	-2.7543E-05	0.33566	0.00019478	0.2882	0.00016724	580.3014620786945	49.57	0.81506	50.415	49.993	50.809	0.84501					45	19	3	0	0	0	0.36918	1	4845	4845		61.765	3.5346	1	2193500			10341	8031	7287	7295	11802	11802					0.0151160142986555
GEDRSPPTAL	10	Unmodified	_GEDRSPPTAL_					0	0	0		ENSG00000079277|ENST00000371945|MKNK1;nc|ENSG00000079277|Q9BUB5-2|MKNK1;nc|ENSG00000079277|Q9BUB5|MKNK1	ENSG00000079277|ENST00000371945|MKNK1	ENSG00000079277|ENST00000371945|MKNK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7598266601562	2	521.76182	1041.50909	0.78394	0.00040903	-1.1081	-0.00057819	-0.32421	-0.00016916	521.7613274665126	37.238	1.2806	37.724	37.078	38.359	0.48581					66	31	5	0	0	0	0.5442	1	2999	2999		53.089	6.6322	1	870940			10342	1414	7288	7296	11803	11803					-0.010006258044313654
GEDSDVLSIN	10	Unmodified	_GEDSDVLSIN_					0	0	0		nc|ENSG00000120159|Q9H8G2-2|CAAP1;ENSG00000120159|ENST00000333916|CAAP1	nc|ENSG00000120159|Q9H8G2-2|CAAP1	nc|ENSG00000120159|Q9H8G2-2|CAAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.7459106445312	2	524.743293	1047.47203	0.69249	0.00036338	0.53949	0.0002831	1.232	0.00064648	524.743544278018	24.742	0.77218	24.792	24.47	25.242	0.050451					35	23	2	0	0	0	0.8651	1	933	933		25.574	0.12388	1	32886			10343	3115	7289	7297	11804	11804					-0.04980342140834182
GEDSSFLVVRL	11	Unmodified	_GEDSSFLVVRL_					0	0	0		ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF;ENST00000572019.1_1_17:5319973-5322970:-|nuORF	ENSG00000108559|ENST00000573584|NUP88	ENSG00000108559|ENST00000573584|NUP88	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3292846679688	2	611.327328	1220.6401	0.67627	0.00041342	3.945	0.0024117	4.6213	0.0028251	611.331092721009	76.135	1.0972	76.533	76.121	77.218	0.39765					56	30	3	0	0	0	0.22372	2	8625	8625;8637		78.264	20.034	1	868430			10344	2418	7290	7298	11805;11806	11805					0.03860764843625475
GEDSSFLVVRL	11	Unmodified	_GEDSSFLVVRL_					0	0	0		ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF;ENST00000572019.1_1_17:5319973-5322970:-|nuORF	ENSG00000108559|ENST00000573584|NUP88	ENSG00000108559|ENST00000573584|NUP88	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.3282470703125	2	611.327328	1220.6401	0.20331	0.00012429	4.3583	0.0026644	4.5616	0.0027886	611.3319352298555	76.032	1.3858	76.6	75.946	77.332	0.56836					65	38	3	0	0	0	0.26196	2	8649	8639;8649		76.17	23.233	1	768470			10345	2418	7290	7298	11807;11808	11808					0.03860764843625475
GEDVETSKKW	10	Unmodified	_GEDVETSKKW_					0	0	0		nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1;ENSG00000107223|ENST00000224073|EDF1	nc|ENSG00000107223|O60869-2|EDF1	nc|ENSG00000107223|O60869-2|EDF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.7891845703125	2	589.788035	1177.56152	-0.32914	-0.00019412	0.34398	0.00020287	0.01484	8.7525E-06	589.7881126572679	30.566	0.63951	30.591	30.296	30.936	0.025013					41	19	3	0	0	0	0.19099	4	1578	1572;1578;1585;1593		88.177	36.984	1	124060			10346	2336	7291	7299	11809;11810;11811;11812	11810					-0.02016087461470306
GEDVETSKKW	10	Unmodified	_GEDVETSKKW_					0	0	0		nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1;ENSG00000107223|ENST00000224073|EDF1	nc|ENSG00000107223|O60869-2|EDF1	nc|ENSG00000107223|O60869-2|EDF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.7869262695312	2	589.788035	1177.56152	0.29937	0.00017657	-0.33283	-0.0001963	-0.033463	-1.9736E-05	589.7877395134508	30.545	0.57527	30.498	30.229	30.804	-0.047062					36	14	3	0	0	0	0.22362	3	1675	1658;1675;1685		81.525	23.708	1	145810			10347	2336	7291	7299	11813;11814;11815	11814					-0.02016087461470306
GEDVETSKKW	10	Unmodified	_GEDVETSKKW_					0	0	0		nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1;ENSG00000107223|ENST00000224073|EDF1	nc|ENSG00000107223|O60869-2|EDF1	nc|ENSG00000107223|O60869-2|EDF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.7872924804688	2	589.788035	1177.56152	-1.24	-0.00073135	1.27	0.00074904	0.029999	1.7693E-05	589.7885714494649	30.542	0.673	30.531	30.244	30.917	-0.01099					38	17	4	0	0	0	0.54701	2	1615	1606;1615		52.937	11.51	1	151320			10348	2336	7291	7299	11816;11817	11817					-0.02016087461470306
GEDVRSALL	9	Unmodified	_GEDVRSALL_					0	0	0		ENST00000489669.1_1_7:21943673-21945126:-|nuORF;ENST00000435717.1_1_7:21942594-21943829:-|nuORF;ENST00000488845.1_1_7:21941942-21945270:-|nuORF;nc|ENSG00000164649|Q96GN5-5|CDCA7L;nc|ENSG00000164649|Q96GN5-4|CDCA7L;nc|ENSG00000164649|Q96GN5-2|CDCA7L;ENSG00000164649|ENST00000406877|CDCA7L	ENST00000489669.1_1_7:21943673-21945126:-|nuORF	ENST00000489669.1_1_7:21943673-21945126:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.260986328125	2	480.261456	958.50836	-0.1452	-6.9734E-05	0.049424	2.3736E-05	-0.095775	-4.5997E-05	480.26132642873165	49.395	0.52494	50.24	49.952	50.477	0.84501					28	12	3	0	0	0	0.41984	1	4835	4835		56.434	0.92959	1	713480			10349	5984	7292	7300	11818	11818					0.027445795465382616
GEDVRSALL	9	Unmodified	_GEDVRSALL_					0	0	0		ENST00000489669.1_1_7:21943673-21945126:-|nuORF;ENST00000435717.1_1_7:21942594-21943829:-|nuORF;ENST00000488845.1_1_7:21941942-21945270:-|nuORF;nc|ENSG00000164649|Q96GN5-5|CDCA7L;nc|ENSG00000164649|Q96GN5-4|CDCA7L;nc|ENSG00000164649|Q96GN5-2|CDCA7L;ENSG00000164649|ENST00000406877|CDCA7L	ENST00000489669.1_1_7:21943673-21945126:-|nuORF	ENST00000489669.1_1_7:21943673-21945126:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	480.261456	958.50836	0.42766	0.00020539	-0.58953	-0.00028313	-0.16187	-7.7741E-05	480.2610586548611	49.519	0.61393	49.979	49.623	50.237	0.45983	-0.13061	-0.0003171	NaN	56.434	28	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	530550			10350	5984	7292	7300							0.027445795465382616
GEEEEFESI	9	Unmodified	_GEEEEFESI_					0	0	0			REV__nc|ENSG00000132554|Q8NE09-2|RGS22	REV__nc|ENSG00000132554|Q8NE09-2|RGS22	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.3058471679688	2	534.722027	1067.4295	0.19606	0.00010484	-3.3998	-0.0018179	-3.2037	-0.0017131	534.7200404096741	51.216	0.83309	51.651	51.285	52.118	0.43505					28	19	2	0	0	0	0.20789	1	5088	5088		44.117	6.9577	1	557030	+		10351	19012	7293	7301	11819	11819					-0.10151737269075056
GEEEFAGAKL	10	Unmodified	_GEEEFAGAKL_					0	0	0		nc|ENSG00000158941|Q8N163-2|CCAR2;ENSG00000158941|ENST00000308511|CCAR2	nc|ENSG00000158941|Q8N163-2|CCAR2	nc|ENSG00000158941|Q8N163-2|CCAR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.767333984375	2	525.758746	1049.50294	-0.37563	-0.00019749	0.034685	1.8236E-05	-0.34095	-0.00017926	525.7586389057877	48.428	0.95708	48.897	48.156	49.113	0.46941					45	23	4	0	0	0	0.40664	1	4668	4668		63.534	10.597	1	1273800			10352	5504	7294	7302	11820	11820					-0.01983144035943951
GEEEFAGAKL	10	Unmodified	_GEEEFAGAKL_					0	0	0		nc|ENSG00000158941|Q8N163-2|CCAR2;ENSG00000158941|ENST00000308511|CCAR2	nc|ENSG00000158941|Q8N163-2|CCAR2	nc|ENSG00000158941|Q8N163-2|CCAR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7620239257812	2	525.758746	1049.50294	-0.10993	-5.7796E-05	-0.147	-7.7285E-05	-0.25693	-0.00013508	525.7584709108683	48.234	1.076	49.158	48.393	49.469	0.92315					45	26	3	0	0	0	0.66675	1	4666	4666		46.457	3.5925	1	1286600			10353	5504	7294	7302	11821	11821					-0.01983144035943951
GEEGDLKTSL	10	Unmodified	_GEEGDLKTSL_					0	0	0		ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.760986328125	2	524.761486	1047.50842	-1.0853	-0.00056954	0.24168	0.00012682	-0.84365	-0.00044272	524.7615646070581	42.425	0.55753	42.858	42.408	42.966	0.4334					25	13	3	0	0	0	0.15528	1	3779	3779		94.409	23.113	1	1004800			10354	1151	7295	7303	11822	11822					-0.013434652441219441
GEEGDLKTSL	10	Unmodified	_GEEGDLKTSL_					0	0	0		ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	524.761486	1047.50842	-1.5919	-0.00083537	1.0788	0.00056613	-0.51309	-0.00026925	524.7621291167148	42.207	0.51621	42.905	42.494	43.01	0.69754	0.023281	0.00054671	NaN	94.409	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1057000			10355	1151	7295	7303							-0.013434652441219441
GEEILITVL	9	Unmodified	_GEEILITVL_					0	0	0		ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	ENSG00000132507|ENST00000336458|EIF5A	ENSG00000132507|ENST00000336458|EIF5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.79205322265625	2	493.792058	985.569563	0.75109	0.00037088	-0.77615	-0.00038326	-0.025059	-1.2374E-05	493.7915393325102	91.749	1.815	92.199	91.714	93.529	0.44958					108	42	4	0	0	0	0.10807	2	10884	10884;10908		90.777	11.326	1	2387900			10356	3802	7296	7304	11823;11824	11823					0.07620091525939188
GEEILITVL	9	Unmodified	_GEEILITVL_					0	0	0		ENSG00000132507|ENST00000336458|EIF5A;ENSG00000253626|ENST00000520547|EIF5AL1;nc|ENSG00000132507|P63241-2|EIF5A	ENSG00000132507|ENST00000336458|EIF5A	ENSG00000132507|ENST00000336458|EIF5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.791748046875	2	493.792058	985.569563	-1.0082	-0.00049786	0.99365	0.00049066	-0.014583	-7.2009E-06	493.79239689427686	91.796	2.3688	92.259	91.807	94.176	0.46249					119	55	4	0	0	0	0.38563	1	10935	10935		58.782	7.4465	1	3049900			10357	3802	7296	7304	11825	11825					0.07620091525939188
GEELFDHI	8	Unmodified	_GEELFDHI_					0	0	0		nc|ENSG00000156510|Q2TB90-2|HKDC1;ENSG00000156510|ENST00000354624|HKDC1;nc|ENSG00000156515|P19367-4|HK1;nc|ENSG00000156515|P19367-2|HK1;ENSG00000156515|ENST00000359426|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156510|Q2TB90-3|HKDC1	nc|ENSG00000156510|Q2TB90-2|HKDC1;nc|ENSG00000156510|Q2TB90-3|HKDC1	nc|ENSG00000156510|Q2TB90-3|HKDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2253112792969	2	480.227082	958.439611	-0.098141	-4.713E-05	-4.3231	-0.0020761	-4.4213	-0.0021232	480.22491848952086	32.082	0.60151	32.189	31.93	32.532	0.10707					27	13	3	0	0	0	0.60155	1	2241	2241		71.378	13.925	1	392860			10358	15016;15015	7297	7305	11826	11826					-0.04127084753190502
GEENEACN	8	Unmodified	_GEENEACN_					0	0	0			REV__nc|ENSG00000184381|O60733-2|PLA2G6	REV__nc|ENSG00000184381|O60733-2|PLA2G6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.255615234375	2	433.153257	864.291961	0.7348	0.00031828	1.2011	0.00052028	1.936	0.00083856	433.1528765372984	107.13	0.42574	107.22	107.04	107.46	0.091255					16	10	2	0	0	0	0.4196	1	11500	11500		10.866	4.9445	1	68448	+		10359	22671	7298	7306	11827	11827					-0.1456134434949945
GEERATEAGSL	11	Unmodified	_GEERATEAGSL_					0	0	0		nc|ENSG00000116584|Q92974-3|ARHGEF2;nc|ENSG00000116584|Q92974-2|ARHGEF2;ENSG00000116584|ENST00000361247|ARHGEF2	nc|ENSG00000116584|Q92974-3|ARHGEF2	nc|ENSG00000116584|Q92974-3|ARHGEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.2692260742188	2	560.267467	1118.52038	0.64314	0.00036033	-0.20961	-0.00011744	0.43353	0.00024289	560.2671215998889	31.871	0.38633	31.978	31.76	32.146	0.10707					14	8	2	0	0	0	0.52654	1	2205	2205		50.034	6.3827	1	229820			10360	2928	7299	7307	11828	11828					-0.03413848500963468
GEESPILDRY	10	Unmodified	_GEESPILDRY_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.2931518554688	2	589.788035	1177.56152	-1.24	-0.00073135	1.27	0.00074904	0.029999	1.7693E-05	589.7885714494649	30.542	0.673	30.531	30.244	30.917	-0.01099					38	17	4	0	0	0	0.86218	1	1591	1591		32.812	1.2826	1	151320	+		10361	18606	7300	7308	11829	11829					-0.02016087461470306
GEETGIDVTL	10	Unmodified	_GEETGIDVTL_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2564086914062	2	517.256037	1032.49752	0.49681	0.00025698	-0.086254	-4.4615E-05	0.41056	0.00021236	517.2558720128549	69.404	0.88799	69.788	69.224	70.112	0.38416					45	23	4	0	0	0	0.21786	2	7668	7645;7668		82.241	20.133	1	1331800			10362	3371	7301	7309	11830;11831	11831					-0.017428676184181313
GEETGIDVTL	10	Unmodified	_GEETGIDVTL_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2567138671875	2	517.256037	1032.49752	-0.27779	-0.00014369	0.52512	0.00027162	0.24733	0.00012793	517.2561725585743	69.304	0.66964	69.851	69.492	70.162	0.54693					38	17	3	0	0	0	0.21786	3	7659	7659;7671;7683		82.241	15.505	1	1474700			10363	3371	7301	7309	11832;11833;11834	11832					-0.017428676184181313
GEEVEKLV	8	Unmodified	_GEEVEKLV_					0	0	0		ENSG00000131242|ENST00000621161|RAB11FIP4	ENSG00000131242|ENST00000621161|RAB11FIP4	ENSG00000131242|ENST00000621161|RAB11FIP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7441101074219	2	451.745108	901.475663	-0.34142	-0.00015424	1.894	0.00085561	1.5526	0.00070137	451.7457899922303	34.694	1.135	34.701	34.293	35.428	0.0063934					58	27	3	0	0	0	0.89962	1	2116	2116		38.806	0	1	280890			10364	3721	7302	7310	11835	11835					0.020983724236771195
GEEVKKSRL	9	Unmodified	_GEEVKKSRL_					0	0	0			REV__ENST00000014914.5_1_12:13043945-13044290:+|nuORF	REV__ENST00000014914.5_1_12:13043945-13044290:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3036499023438	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.78528	1	8754	8754		29.17	0	1	9288900	+		10365	24060	7303	7311	11836	11836					0.07224530363305348
GEEYGDGSPS	10	Unmodified	_GEEYGDGSPS_					0	0	0		ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.19415283203125	2	499.190894	996.367234	1.8635	0.00093024	2.4097	0.0012029	4.2732	0.0021332	499.1920958208035	99.433	1.2224	99.796	99.447	100.67	0.36292					73	30	4	0	0	0	0.77314	1	12080	12080		40.778	12.896	1	1640300			10366	3850	7304	7312	11837	11837					-0.13109463617399797
GEEYGDGSPS	10	Unmodified	_GEEYGDGSPS_					0	0	0		ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	499.190894	996.367234	-0.51286	-0.00025601	4.724	0.0023582	4.2112	0.0021022	499.1931468716264	99.743	0.72089	99.959	99.481	100.2	0.21511	0.11252	0.0015237	NaN	40.778	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93923			10367	3850	7304	7312							-0.13109463617399797
GEEYGDGSPS	10	Unmodified	_GEEYGDGSPS_					0	0	0		ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	499.190894	996.367234	0.793	0.00039586	3.3697	0.0016821	4.1627	0.002078	499.1924167363944	99.69	0.78868	99.84	99.594	100.38	0.15073	-0.0058105	0.00017156	NaN	40.778	26	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78687			10368	3850	7304	7312							-0.13109463617399797
GEEYGDGSPS	10	Unmodified	_GEEYGDGSPS_					0	0	0		ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	499.190894	996.367234	-1.6176	-0.0008075	5.782	0.0028863	4.1644	0.0020788	499.19365619651694	99.72	0.77763	99.906	99.562	100.34	0.18582	0.059447	0.0025799	NaN	40.778	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53692			10369	3850	7304	7312							-0.13109463617399797
GEFGEIEAIEL	11	Unmodified	_GEFGEIEAIEL_					0	0	0		nc|ENSG00000197451|Q99729-3|HNRNPAB;nc|ENSG00000197451|Q99729-4|HNRNPAB;nc|ENSG00000197451|Q99729|HNRNPAB;ENSG00000197451|ENST00000358344|HNRNPAB	nc|ENSG00000197451|Q99729-3|HNRNPAB	nc|ENSG00000197451|Q99729-3|HNRNPAB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	603.7979736328125	2	603.798069	1205.58158	1.719	0.0010379	-1.327	-0.00080122	0.392	0.00023669	603.7971597365522	91.222	0.83992	91.671	91.3	92.14	0.44958					62	19	5	0	0	0	0.00073685	4	10819	10807;10819;10831;10845		124.08	0	1	2009800			10370	8167	7305	7313	11838;11839;11840;11841	11839					-0.012983365215404774
GEFGEIEAIEL	11	Unmodified	_GEFGEIEAIEL_					0	0	0		nc|ENSG00000197451|Q99729-3|HNRNPAB;nc|ENSG00000197451|Q99729-4|HNRNPAB;nc|ENSG00000197451|Q99729|HNRNPAB;ENSG00000197451|ENST00000358344|HNRNPAB	nc|ENSG00000197451|Q99729-3|HNRNPAB	nc|ENSG00000197451|Q99729-3|HNRNPAB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.798095703125	2	603.798069	1205.58158	-1.0324	-0.00062338	1.5747	0.00095081	0.54229	0.00032744	603.7988638926162	91.296	0.75785	91.766	91.442	92.2	0.47068					46	17	3	0	0	0	0.05483	3	10872	10860;10872;10883		101.25	0	1	2308800			10371	8167	7305	7313	11842;11843;11844	11843					-0.012983365215404774
GEFKGAMLTGP	11	Unmodified	_GEFKGAMLTGP_					0	0	0		ENST00000436447.5_1_16:90046667-90060229:+|nuORF	ENST00000436447.5_1_16:90046667-90060229:+|nuORF	ENST00000436447.5_1_16:90046667-90060229:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.2771606445312	2	554.278792	1106.54303	0.34287	0.00019005	-3.046	-0.0016883	-2.7031	-0.0014983	554.2768611012594	64.056	0.53665	64.021	63.8	64.337	-0.034248					25	14	2	0	0	0	0.1837	1	6092	6092		80.455	6.1996	1	265730			10372	11721	7306	7314	11845	11845					-0.005979206370511747
GEFQLLTNW	9	Unmodified	_GEFQLLTNW_					0	0	0			REV__ENST00000426028.2_1_9:29825693-29826221:-|nuORF	REV__ENST00000426028.2_1_9:29825693-29826221:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.2755737304688	2	554.277106	1106.53966	-0.81154	-0.00044982	-0.011159	-6.1851E-06	-0.8227	-0.000456	554.2774489517487	64.174	1.556	64.173	63.288	64.844	-0.00078583					85	58	3	0	0	0	0.14386	3	5975	5965;5975;5992		84.916	4.4609	1	282300	+		10373	26541	7307	7315	11846;11847;11848	11847					-0.00934847419421203
GEFQLLTNW	9	Unmodified	_GEFQLLTNW_					0	0	0			REV__ENST00000426028.2_1_9:29825693-29826221:-|nuORF	REV__ENST00000426028.2_1_9:29825693-29826221:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.2767944335938	2	554.277106	1106.53966	0.34287	0.00019005	-0.0052604	-2.9157E-06	0.33761	0.00018713	554.2768611012594	64.056	0.53665	64.021	63.8	64.337	-0.034248					25	14	2	0	0	0	0.057432	1	6104	6104		104.75	3.2867	1	265730	+		10374	26541	7307	7315	11849	11849					-0.00934847419421203
GEFQLLTNW	9	Unmodified	_GEFQLLTNW_					0	0	0			REV__ENST00000426028.2_1_9:29825693-29826221:-|nuORF	REV__ENST00000426028.2_1_9:29825693-29826221:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.2782592773438	2	554.277106	1106.53966	-0.31344	-0.00017373	-0.36379	-0.00020164	-0.67723	-0.00037538	554.2772058796023	63.977	1.4864	64.004	63.353	64.839	0.027138					74	46	3	0	0	0	0.07589	1	6003	6003		98.629	10.452	1	282550	+		10375	26541	7307	7315	11850	11850					-0.00934847419421203
GEFQLLTNW	9	Unmodified	_GEFQLLTNW_					0	0	0			REV__ENST00000426028.2_1_9:29825693-29826221:-|nuORF	REV__ENST00000426028.2_1_9:29825693-29826221:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	554.277106	1106.53966	-0.31344	-0.00017373	-0.36379	-0.00020164	-0.67723	-0.00037538	554.2772058796023	63.977	1.4864	64.004	63.353	64.839	0.027138	-0.061907	-0.00031212	NaN	104.75	74	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	282550	+		10376	26541	7307	7315							-0.00934847419421203
GEGDSVITQVL	11	Unmodified	_GEGDSVITQVL_					0	0	0		ENSG00000164985|ENST00000380733|PSIP1	ENSG00000164985|ENST00000380733|PSIP1	ENSG00000164985|ENST00000380733|PSIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2906494140625	2	559.290411	1116.56627	-0.060928	-3.4076E-05	-0.047323	-2.6468E-05	-0.10825	-6.0544E-05	559.2902950832719	77.079	1.0886	77.647	77.332	78.421	0.56836					71	26	4	0	0	0	0.33092	1	8826	8826		66.92	3.3864	1	4085400			10377	6035	7308	7316	11851	11851					0.012647966812892264
GEGFQIYTN	9	Unmodified	_GEGFQIYTN_					0	0	0		ENST00000543693.5_1_9:14086406-14086523:-|nuORF	ENST00000543693.5_1_9:14086406-14086523:-|nuORF	ENST00000543693.5_1_9:14086406-14086523:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.80908203125	2	514.737814	1027.46108	-0.22014	-0.00011332	3.3431	0.0017208	3.123	0.0016075	514.7395070136375	50.092	0.45195	50	49.802	50.254	-0.091793					15	10	2	0	0	0	0.20789	1	3944	3944		20.947	0	1	121390			10378	13557	7309	7317	11852	11852					-0.051556997244460945
GEGGDPARL	9	Unmodified	_GEGGDPARL_					0	0	0			REV__nc|ENSG00000095370|Q8N5H7-4|SH2D3C	REV__nc|ENSG00000095370|Q8N5H7-4|SH2D3C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.300048828125	2	436.217049	870.419545	0.47141	0.00020564	-2.2837	-0.00099618	-1.8123	-0.00079054	436.2180016119075	71.304	0.0634	71.434	71.402	71.466	0.1301					4	2	2	0	0	0	0.20789	1	6503	6503		27.882	6.9353	1	15874	+		10379	29729	7310	7318	11853	11853					-0.02084835693142395
GEGGQGVHH	9	Unmodified	_GEGGQGVHH_					0	0	0		ENST00000551688.1_1_12:101790345-101801520:-|nuORF;ENST00000539055.5_1_12:101796714-101801520:-|nuORF;ENST00000551092.5_1_12:101799623-101801520:-|nuORF;ENST00000261636.12_1_12:101796714-101801562:-|nuORF	ENST00000551688.1_1_12:101790345-101801520:-|nuORF	ENST00000551688.1_1_12:101790345-101801520:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.1978759765625	2	439.19919	876.383828	2.7664	0.001215	-2.7509	-0.0012082	0.015504	6.8092E-06	439.1979044520637	101.42	0.60172	101.74	101.6	102.2	0.32511					24	15	2	0	0	0	0.78058	1	12351	12351		30.504	2.2494	1	686280			10380	9412	7311	7319	11854	11854					-0.05930873150145999
GEGHTQDTEL	10	Unmodified	_GEGHTQDTEL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.7385864257812	2	543.738542	1085.46253	-1.0901	-0.00059271	0.9561	0.00051987	-0.13397	-7.2843E-05	543.738903191231	27.651	0.86607	27.554	27.228	28.094	-0.096947					38	19	3	0	0	0	0.23224	1	1613	1613		80.455	9.0767	1	986990			10381	8464	7312	7320	11855	11855					-0.07678110426377316
GEGHTQDTEL	10	Unmodified	_GEGHTQDTEL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	543.738542	1085.46253	0.98262	0.00053429	-1.1204	-0.0006092	-0.13778	-7.4914E-05	543.7378454699299	27.661	0.70065	27.407	27.152	27.853	-0.25465	-0.073655	-0.00051579	NaN	80.455	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	827510			10382	8464	7312	7320							-0.07678110426377316
GEGKLAPIP	9	Unmodified	_GEGKLAPIP_					0	0	0		nc|nan|Q5SWW7|C10orf55	nc|nan|Q5SWW7|C10orf55	nc|nan|Q5SWW7|C10orf55	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.30352783203125	2	441.258185	880.501818	-2.0417	-0.00090094	1.5643	0.00069027	-0.47743	-0.00021067	441.25880389491897	40.183	0.58907	40.551	40.11	40.699	0.36797					18	14	2	0	0	0	0.20789	1	3435	3435		17.365	0	1	83247			10383	15369	7313	7321	11856	11856					0.056786863857951175
GEGKMCICFS	10	2 Carbamidomethyl (C),Oxidation (M)	_GEGKM(Oxidation (M))C(Carbamidomethyl (C))IC(Carbamidomethyl (C))FS_	GEGKMC(1)IC(1)FS	GEGKM(1)CICFS	GEGKMC(55)IC(55)FS	GEGKM(55)CICFS	0	2	1		nc|ENSG00000156510|Q2TB90-3|HKDC1	nc|ENSG00000156510|Q2TB90-3|HKDC1	nc|ENSG00000156510|Q2TB90-3|HKDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	602.741943359375	2	602.743402	1203.47225	-0.51898	-0.00031281	-2.1981	-0.0013249	-2.7171	-0.0016377	602.7419272128744	84.838	1.2182	84.897	84.197	85.415	0.05925					64	27	3	0	0	0	0.51302	1	8583	8583		54.776	12.38	1	373410			10384	15016	7314	7322	11857	11857	201;202	218			-0.12134705008497804
GEGRESLY	8	Unmodified	_GEGRESLY_					0	0	0		nc|ENSG00000040199|Q6ZVD8-3|PHLPP2;ENSG00000040199|ENST00000568954|PHLPP2;nc|ENSG00000040199|Q6ZVD8-2|PHLPP2;ENST00000538126.5_1_16:71712656-71757677:-|nuORF	nc|ENSG00000040199|Q6ZVD8-3|PHLPP2	nc|ENSG00000040199|Q6ZVD8-3|PHLPP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.717529296875	2	455.716882	909.41921	-1.5466	-0.00070482	2.9718	0.0013543	1.4252	0.00064949	455.71807848654714	29.524	1.0849	29.495	28.954	30.039	-0.029207					49	24	3	0	0	0	0.89962	1	1863	1863		38.806	1.647	1	408200			10385	927	7315	7323	11858	11858					-0.039122554130017306
GEGRLDYFI	9	Unmodified	_GEGRLDYFI_					0	0	0			REV__ENST00000566560.5_1_16:75668010-75682538:-|nuORF	REV__ENST00000566560.5_1_16:75668010-75682538:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2670288085938	2	535.269281	1068.52401	0.30503	0.00016327	-2.4959	-0.001336	-2.1909	-0.0011727	535.2678902855296	25.638	0.63939	25.381	25.043	25.682	-0.2572					35	14	3	0	0	0	0.43338	1	1351	1351		55.504	5.9682	1	367200	+		10386	16500	7316	7324	11859	11859					-0.007511339364327796
GEGVLKVKW	9	Unmodified	_GEGVLKVKW_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2403564453125	2	508.300384	1014.58622	-0.4148	-0.00021084	3.3704	0.0017132	2.9556	0.0015023	508.80293341903933	38.479	0.20089	38.821	38.737	38.938	0.34187					6	4	2	0	0	0	0.20789	1	3158	3158		10.866	0	1	33802	+		10387	17426	7317	7325	11860	11860					0.07950637202554844
GEGVVRPIGL	10	Unmodified	_GEGVVRPIGL_					0	0	0			REV__ENST00000335154.9_1_12:50030305-50030404:-|nuORF	REV__ENST00000335154.9_1_12:50030305-50030404:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.79571533203125	2	498.795466	995.57638	0.17641	8.7992E-05	1.5521	0.00077416	1.7285	0.00086215	498.79609522633086	20.46	0.80788	20.001	19.732	20.54	-0.4591					39	18	3	0	0	0	0.85939	1	654	654		23.042	2.0956	1	154980	+		10388	25164	7318	7326	11861	11861					0.07841449197189831
GEGYLNFMGN	10	Unmodified	_GEGYLNFMGN_					0	0	0		ENSG00000114480|ENST00000429644|GBE1	ENSG00000114480|ENST00000429644|GBE1	ENSG00000114480|ENST00000429644|GBE1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.9287109375	2	551.237124	1100.45969	0.76229	0.0004202	-0.54794	-0.00030205	0.21435	0.00011816	551.2360424178509	25.862	0.09952	25.886	25.84	25.939	0.024021					5	3	2	0	0	0	0.37624	1	956	956		8.6937	0	1	25533			10389	2773	7319	7327	11862	11862					-0.08651657084874387
GEHCFSRNL	9	Unmodified	_GEHCFSRNL_					0	0	0		ENST00000261318.4_1_12:117154687-117154906:-|nuORF	ENST00000261318.4_1_12:117154687-117154906:-|nuORF	ENST00000261318.4_1_12:117154687-117154906:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.742919921875	2	531.742908	1061.47126	-1.4474	-0.00076965	0.48733	0.00025914	-0.96008	-0.00051052	531.7430357137475	41.662	0.61732	41.662	41.359	41.976	0					25	14	2	0	0	0	0.71772	1	2812	2812		39.253	0	1	246550			10390	9406	7320	7328	11863	11863					-0.0570141527089163
GEHCFSRNL	9	Unmodified	_GEHCFSRNL_					0	0	0		ENST00000261318.4_1_12:117154687-117154906:-|nuORF	ENST00000261318.4_1_12:117154687-117154906:-|nuORF	ENST00000261318.4_1_12:117154687-117154906:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.741943359375	2	531.742908	1061.47126	-0.59028	-0.00031388	-0.6334	-0.00033681	-1.2237	-0.00065068	531.742394862597	41.771	0.82603	41.774	41.461	42.287	0.0034142					40	19	3	0	0	0	0.41984	1	3141	3141		56.434	6.9922	1	539690			10391	9406	7320	7328	11864	11864					-0.0570141527089163
GEHVTWRKY	9	Unmodified	_GEHVTWRKY_					0	0	0		ENSG00000197081|ENST00000356956|IGF2R	ENSG00000197081|ENST00000356956|IGF2R	ENSG00000197081|ENST00000356956|IGF2R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	588.3049926757812	2	588.301447	1174.58834	-0.7012	-0.00041252	3.3047	0.0019441	2.6035	0.0015316	588.3031740612654	80.447	0.8185	80.509	80.19	81.009	0.062225					56	24	3	0	0	0	0.25483	1	7867	7867		68.787	2.3575	1	478690			10392	8132	7321	7329	11865	11865					0.008030659403857499
GEIDEETDSAL	11	Unmodified	_GEIDEETDSAL_					0	0	0		ENSG00000128534|ENST00000249299|LSM8	ENSG00000128534|ENST00000249299|LSM8	ENSG00000128534|ENST00000249299|LSM8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.7537231445312	2	589.756598	1177.49864	-0.7027	-0.00041442	0.92289	0.00054428	0.22019	0.00012986	589.7570602038519	56.301	0.92947	56.698	56.315	57.244	0.39672					52	23	3	0	0	0	0.012426	4	5797	5789;5797;5809;5821		109.48	43.049	1	3645500			10393	3546	7322	7330	11866;11867;11868;11869	11867					-0.08300698040170573
GEIDEETDSAL	11	Unmodified	_GEIDEETDSAL_					0	0	0		ENSG00000128534|ENST00000249299|LSM8	ENSG00000128534|ENST00000249299|LSM8	ENSG00000128534|ENST00000249299|LSM8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.7550659179688	2	589.756598	1177.49864	0.47151	0.00027808	-0.048765	-2.8759E-05	0.42274	0.00024932	589.7564583936623	56.173	0.94886	56.732	56.452	57.401	0.55953					52	22	3	0	0	0	0.0021596	2	5798	5798;5809		117.81	51.382	1	3158400			10394	3546	7322	7330	11870;11871	11870					-0.08300698040170573
GEIDGNKVTL	10	Unmodified	_GEIDGNKVTL_					0	0	0		ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	ENSG00000115053|ENST00000322723|NCL	ENSG00000115053|ENST00000322723|NCL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.2796630859375	2	523.279846	1044.54514	-0.22401	-0.00011722	-0.38299	-0.00020041	-0.607	-0.00031763	523.2795616737903	46.122	0.92947	46.594	46.132	47.061	0.47139					59	22	4	0	0	0	5.8848E-24	4	4333	4311;4321;4333;4345		177.3	61.682	1	10553000			10395	2809	7323	7331	11872;11873;11874;11875	11874					0.02464831372435583
GEIDGNKVTL	10	Unmodified	_GEIDGNKVTL_					0	0	0		ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF	ENSG00000115053|ENST00000322723|NCL	ENSG00000115053|ENST00000322723|NCL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.279052734375	2	523.279846	1044.54514	-0.58767	-0.00030751	-0.22179	-0.00011606	-0.80945	-0.00042357	523.2796483882576	45.931	0.87996	46.826	46.447	47.327	0.89542					58	21	4	0	0	0	5.0316E-17	5	4315	4295;4303;4315;4327;4342		172.25	58.837	1	10927000			10396	2809	7323	7331	11876;11877;11878;11879;11880	11878					0.02464831372435583
GEIDQQYSRF	10	Unmodified	_GEIDQQYSRF_					0	0	0		nc|ENSG00000168610|P40763-3|STAT3;nc|ENSG00000168610|P40763-2|STAT3;ENSG00000168610|ENST00000264657|STAT3	nc|ENSG00000168610|P40763-3|STAT3	nc|ENSG00000168610|P40763-3|STAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.7910766601562	2	621.791109	1241.56767	-0.16377	-0.00010183	0.34525	0.00021467	0.18147	0.00011284	621.7912910233359	50.46	0.56909	50.458	50.18	50.749	-0.0020447					38	14	4	0	0	0	0.20518	4	4276	4254;4264;4276;4288		84.817	45.564	1	529280			10397	6416	7324	7332	11881;11882;11883;11884	11883					-0.043455692299630755
GEIDQQYSRF	10	Unmodified	_GEIDQQYSRF_					0	0	0		nc|ENSG00000168610|P40763-3|STAT3;nc|ENSG00000168610|P40763-2|STAT3;ENSG00000168610|ENST00000264657|STAT3	nc|ENSG00000168610|P40763-3|STAT3	nc|ENSG00000168610|P40763-3|STAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.7908325195312	2	621.791109	1241.56767	-0.51862	-0.00032247	0.67756	0.0004213	0.15894	9.8829E-05	621.7914017193553	50.473	0.56898	50.449	50.164	50.733	-0.02343					33	13	3	0	0	0	0.14654	4	4376	4354;4364;4376;4387		95.483	42.546	1	627070			10398	6416	7324	7332	11885;11886;11887;11888	11887					-0.043455692299630755
GEIDQQYSRF	10	Unmodified	_GEIDQQYSRF_					0	0	0		nc|ENSG00000168610|P40763-3|STAT3;nc|ENSG00000168610|P40763-2|STAT3;ENSG00000168610|ENST00000264657|STAT3	nc|ENSG00000168610|P40763-3|STAT3	nc|ENSG00000168610|P40763-3|STAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.79150390625	2	621.791109	1241.56767	-0.18643	-0.00011592	0.58401	0.00036313	0.39758	0.00024721	621.791358206698	50.52	0.60852	50.527	50.213	50.821	0.0077438					45	16	4	0	0	0	0.18266	4	4318	4297;4306;4318;4330		90.149	45.127	1	615590			10399	6416	7324	7332	11889;11890;11891;11892	11891					-0.043455692299630755
GEIDTRFSF	9	Unmodified	_GEIDTRFSF_					0	0	0		ENSG00000137955|ENST00000319942|RABGGTB	ENSG00000137955|ENST00000319942|RABGGTB	ENSG00000137955|ENST00000319942|RABGGTB	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	536.2588500976562	2	536.258914	1070.50327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.85	1	64.854	64.354	65.354	0.0046997								0	0	0	0.41254	1	6076	6076		58.23	4.8785	1				10400	4248	7325	7333	11893	11893					-0.02915724316108026
GEIDTRFSF	9	Unmodified	_GEIDTRFSF_					0	0	0		ENSG00000137955|ENST00000319942|RABGGTB	ENSG00000137955|ENST00000319942|RABGGTB	ENSG00000137955|ENST00000319942|RABGGTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	536.25927734375	2	536.258914	1070.50327	-0.32155	-0.00017244	0.93471	0.00050125	0.61316	0.00032881	536.2592888744375	64.613	0.57709	64.64	64.376	64.953	0.027145					22	14	2	0	0	0	0.39367	1	6107	6107		58.23	0.41864	1	134630			10401	4248	7325	7333	11894	11894					-0.02915724316108026
GEIDTRFSF	9	Unmodified	_GEIDTRFSF_					0	0	0		ENSG00000137955|ENST00000319942|RABGGTB	ENSG00000137955|ENST00000319942|RABGGTB	ENSG00000137955|ENST00000319942|RABGGTB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	536.258914	1070.50327	0.45847	0.00024586	0.097005	5.202E-05	0.55548	0.00029788	536.2588683371937	64.689	0.48968	64.654	64.403	64.893	-0.034798	0.0071965	-0.00055474	NaN	58.23	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112240			10402	4248	7325	7333							-0.02915724316108026
GEIGGTEEY	9	Unmodified	_GEIGGTEEY_					0	0	0		nc|ENSG00000131473|P53396-3|ACLY;nc|ENSG00000131473|P53396-2|ACLY;ENSG00000131473|ENST00000352035|ACLY	nc|ENSG00000131473|P53396-3|ACLY	nc|ENSG00000131473|P53396-3|ACLY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7041320800781	2	477.70618	953.397806	-0.50441	-0.00024096	-3.5629	-0.001702	-4.0673	-0.001943	477.7043433670684	56.119	0.43791	56.678	56.483	56.92	0.55954					24	10	3	0	0	0	0.74721	1	5802	5802		37.159	0.71236	1	4215600			10403	3734	7326	7334	11895	11895					-0.08075685232370233
GEIIKLPI	8	Unmodified	_GEIIKLPI_					0	0	0		ENSG00000088538|ENST00000266037|DOCK3	ENSG00000088538|ENST00000266037|DOCK3	ENSG00000088538|ENST00000266037|DOCK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7878112792969	2	441.786579	881.558604	-1.4973	-0.00066148	4.3629	0.0019275	2.8656	0.001266	441.788391738542	44.7	2.6432	44.712	43.395	46.038	0.012058					134	65	3	0	0	0	0.85277	1	3194	3194		25.45	1.2474	1	555340			10404	1591	7327	7335	11896	11896					0.11308733942325944
GEILSRRAS	9	Unmodified	_GEILSRRAS_					0	0	0		nc|ENSG00000049883|Q8WV60-2|PTCD2;nc|ENSG00000049883|Q8WV60-3|PTCD2;ENSG00000049883|ENST00000380639|PTCD2	nc|ENSG00000049883|Q8WV60-2|PTCD2	nc|ENSG00000049883|Q8WV60-2|PTCD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7799072265625	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.78528	1	8472	8472		29.17	0.91578	1	569520			10405	990	7328	7336	11897	11897					0.051870905319901794
GEIRVPLRRL	10	Unmodified	_GEIRVPLRRL_					0	0	0		nc|ENSG00000149927|Q14183-2|DOC2A;ENST00000561671.5_1_16:30017707-30020344:-|nuORF;ENSG00000149927|ENST00000350119|DOC2A	nc|ENSG00000149927|Q14183-2|DOC2A	nc|ENSG00000149927|Q14183-2|DOC2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.59149169921875	3	403.591051	1207.75132	-2.1639	-0.00087334	0.19111	7.7128E-05	-1.9728	-0.00079621	403.5910116026587	16.24	0.19313	16.24	16.144	16.337	0					12	8	2	0	0	0	0.86763	1	106	106		19.263	2.0959	1	49655			10406	5054	7329	7337	11898	11898					0.155758690622406
GEKGQMGLSF	10	Unmodified	_GEKGQMGLSF_					0	0	0		nc|ENSG00000187498|P02462-2|COL4A1;ENSG00000187498|ENST00000375820|COL4A1	nc|ENSG00000187498|P02462-2|COL4A1	nc|ENSG00000187498|P02462-2|COL4A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.2584838867188	2	527.255317	1052.49608	0.66214	0.00034912	2.9891	0.001576	3.6512	0.0019251	527.2567706615374	25.253	0.8396	25.303	24.898	25.737	0.050451					79	32	4	0	0	0	0.86698	1	1022	1022		28.081	1.3886	1	313920			10407	7855	7330	7338	11899	11899					-0.02806780188166158
GEKGRRGQFI	10	Unmodified	_GEKGRRGQFI_					0	0	0		nc|ENSG00000065054|Q15599-2|NHERF2;ENSG00000065054|ENST00000424542|NHERF2	nc|ENSG00000065054|Q15599-2|NHERF2	nc|ENSG00000065054|Q15599-2|NHERF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3190307617188	2	574.320171	1146.62579	-0.44784	-0.0002572	-0.65623	-0.00037689	-1.1041	-0.00063409	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.85981	1	9533	9533		35.152	3.1972	1	1099700			10408	1118	7331	7339	11900	11900					0.0583415720600442
GEKLGSAVK	9	Unmodified	_GEKLGSAVK_					0	0	0			REV__nc|ENSG00000204410|O43196-4|MSH5	REV__nc|ENSG00000204410|O43196-4|MSH5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	445.63592529296875	2	444.761092	887.507631	-0.065369	-2.9074E-05	3.9532	0.0017582	3.8878	0.0017292	444.7609271580109	39.48	0.93878	39.427	38.87	39.809	-0.052727					38	25	3	0	0	0	0.20789	1	2425	2425		16.473	9.2798	1	109890	+		10409	23490	7332	7340	11901	11901					0.059377848974691005
GEKLGSAVK	9	Unmodified	_GEKLGSAVK_					0	0	0			REV__nc|ENSG00000204410|O43196-4|MSH5	REV__nc|ENSG00000204410|O43196-4|MSH5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	444.761092	887.507631	-1.4512	-0.00064546	4.3402	0.0019303	2.8889	0.0012849	444.761648825576	39.536	0.88842	39.542	38.942	39.831	0.0065002	0.074591	0.00044254	NaN	16.473	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136790	+		10410	23490	7332	7340							0.059377848974691005
GEKMSLKCC	9	Oxidation (M)	_GEKM(Oxidation (M))SLKCC_		GEKM(1)SLKCC		GEKM(55)SLKCC	0	0	1			REV__nc|ENSG00000135269|Q9UGI8-2|TES	REV__nc|ENSG00000135269|Q9UGI8-2|TES	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	507.7261047363281	2	507.724481	1013.43441	-0.011027	-5.5987E-06	3.4082	0.0017304	3.3972	0.0017248	507.72602074388385	64.082	0.69483	64.048	63.709	64.404	-0.034256					34	19	3	0	0	0	0.44421	1	6115	6115		54.776	8.8244	1	205940	+		10411	19204	7333	7341	11902	11902		283			-0.07177171203306898
GEKPFPLNV	9	Unmodified	_GEKPFPLNV_					0	0	0			REV__ENSG00000196531|ENST00000454682|NACA	REV__ENSG00000196531|ENST00000454682|NACA	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.7748107910156	2	500.776742	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.706	1	50.614	50.114	51.114	-0.091797								0	0	0	0.29273	1	4000	4000		40.778	1.972	1		+		10412	23140	7334	7342	11903	11903					0.03914357931569157
GEKQPELQI	9	Unmodified	_GEKQPELQI_					0	0	0		ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2813110351562	2	521.282389	1040.55022	-0.85405	-0.0004452	0.21018	0.00010956	-0.64388	-0.00033564	521.2823263181323	42.715	0.7851	43.148	42.842	43.627	0.4334					44	18	3	0	0	0	0.33718	1	3832	3832		62.107	1.1355	1	1074400			10413	1934	7335	7343	11904	11904					0.031571352350511006
GEKRPFLK	8	Unmodified	_GEKRPFLK_					0	0	0			REV__ENSG00000083814|ENST00000317398|ZNF671	REV__ENSG00000083814|ENST00000317398|ZNF671	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.790771484375	2	487.792727	973.5709	-1.6547	-0.00080716	-2.8491	-0.0013898	-4.5038	-0.0021969	487.7917088058772	97.25	1.1099	97.452	97.096	98.206	0.20207					54	25	3	0	0	0	0.88185	1	10008	10008		32.812	2.9709	1	202870	+		10414	16863	7336	7344	11905	11905					0.0830577040536582
GEKSNSKPE	9	Unmodified	_GEKSNSKPE_					0	0	0		ENSG00000196724|ENST00000396147|ZNF418	ENSG00000196724|ENST00000396147|ZNF418	ENSG00000196724|ENST00000396147|ZNF418	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	488.2388000488281	2	488.240721	974.466889	-0.76555	-0.00037377	-3.1313	-0.0015288	-3.8969	-0.0019026	488.23915790607873	50.07	0.78275	50.1	49.823	50.606	0.029629					35	22	2	0	0	0	0.76255	1	3918	3918		35.618	4.0885	1	305370			10415	8096	7337	7345	11906	11906					-0.021366012128055445
GEKSNSKPE	9	Unmodified	_GEKSNSKPE_					0	0	0		ENSG00000196724|ENST00000396147|ZNF418	ENSG00000196724|ENST00000396147|ZNF418	ENSG00000196724|ENST00000396147|ZNF418	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	488.240721	974.466889	-1.5535	-0.00075847	-2.959	-0.0014447	-4.5125	-0.0022032	488.2390008396921	49.993	0.38166	49.993	49.838	50.22	0	-0.095355	0.00076201	NaN	35.618	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58861			10416	8096	7337	7345							-0.021366012128055445
GEKSNSKPE	9	Unmodified	_GEKSNSKPE_					0	0	0		ENSG00000196724|ENST00000396147|ZNF418	ENSG00000196724|ENST00000396147|ZNF418	ENSG00000196724|ENST00000396147|ZNF418	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	488.240721	974.466889	0.046577	2.2741E-05	-3.3898	-0.0016551	-3.3433	-0.0016323	488.2391805400409	50.107	0.40107	50.104	49.99	50.391	-0.0030327	0.015508	0.00034131	NaN	35.618	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48441			10417	8096	7337	7345							-0.021366012128055445
GELGDMCEH	9	Unmodified	_GELGDMCEH_					0	0	0		ENSG00000092067|ENST00000206513|CEBPE	ENSG00000092067|ENST00000206513|CEBPE	ENSG00000092067|ENST00000206513|CEBPE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.68756103515625	2	495.68641	989.358266	0.12193	6.0441E-05	2.1264	0.001054	2.2483	0.0011145	495.68749694904426	88.261	0.92693	88.71	88.395	89.321	0.44892					56	22	4	0	0	0	0.72402	1	10401	10401		38.806	0.99462	1	1448600			10418	1689	7338	7346	11907	11907					-0.13683851779092038
GELGNGNIKL	10	Unmodified	_GELGNGNIKL_					0	0	0		ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.78167724609375	2	507.782556	1013.55056	-0.62334	-0.00031652	0.21134	0.00010731	-0.412	-0.00020921	507.7824128870662	48.786	0.55515	49.246	48.985	49.54	0.45983					37	13	4	0	0	0	0.18075	3	4711	4711;4722;4734		90.601	25.744	1	1419600			10419	3814	7339	7347	11908;11909;11910	11908					0.04432554954883017
GELGNGNIKL	10	Unmodified	_GELGNGNIKL_					0	0	0		ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.7817687988281	2	507.782556	1013.55056	0.88571	0.00044975	-1.5407	-0.00078236	-0.65502	-0.00033261	507.78156278549454	48.627	0.55497	49.532	49.25	49.805	0.90424					34	13	3	0	0	0	0.23224	1	4724	4724		80.455	3.6805	1	1346600			10420	3814	7339	7347	11911	11911					0.04432554954883017
GELKWTQRVY	10	Unmodified	_GELKWTQRVY_					0	0	0			REV__ENSG00000115085|ENST00000264972|ZAP70	REV__ENSG00000115085|ENST00000264972|ZAP70	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3463745117188	2	640.343312	1278.67207	2.7219	0.001743	2.203	0.0014107	4.925	0.0031537	640.344890509357	103.09	0.62273	103.04	102.7	103.32	-0.047005					51	14	6	0	0	0	0.67571	1	11284	11284		45.972	2.3215	1	3077100	+		10421	18084	7340	7348	11912	11912					0.043881773174234695
GELPAPGPEI	10	Unmodified	_GELPAPGPEI_					0	0	0		ENST00000525284.5_1_15:101598322-101602587:+|nuORF	ENST00000525284.5_1_15:101598322-101602587:+|nuORF	ENST00000525284.5_1_15:101598322-101602587:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.25799560546875	2	490.258382	978.502212	1.5736	0.00077149	-2.2967	-0.001126	-0.72311	-0.00035451	490.25714425919216	107.1	2.1346	107.2	105.77	107.9	0.10396					168	84	3	0	0	0	0.8608	1	13076	13076		34.173	2.2177	1	1431500			10422	13233	7341	7349	11913	11913					0.012100613149868877
GELQLLRT	8	Unmodified	_GELQLLRT_					0	0	0		ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;ENSG00000108846|ENST00000285238|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3;nc|ENSG00000108846|O15438-5|ABCC3	ENST00000502426.5_1_17:48736553-48755440:+|nuORF	ENST00000502426.5_1_17:48736553-48755440:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.2742004394531	2	465.274367	928.53418	0.25314	0.00011778	-0.11026	-5.13E-05	0.14288	6.6479E-05	465.2741502475915	18.734	0.57257	18.257	17.983	18.556	-0.47694					29	12	4	0	0	0	0.66521	2	425	425;437		68.787	10.005	1	404680			10423	2436	7342	7350	11914;11915	11914					0.06705473788815652
GELQLLRT	8	Unmodified	_GELQLLRT_					0	0	0		ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;ENSG00000108846|ENST00000285238|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3;nc|ENSG00000108846|O15438-5|ABCC3	ENST00000502426.5_1_17:48736553-48755440:+|nuORF	ENST00000502426.5_1_17:48736553-48755440:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.2740478515625	2	465.274367	928.53418	-0.08443	-3.9283E-05	0.20121	9.3619E-05	0.11678	5.4335E-05	465.2742697431077	18.912	0.59952	18.282	17.975	18.575	-0.62961					34	13	3	0	0	0	0.36381	2	444	444;456		85.359	16.875	1	417230			10424	2436	7342	7350	11916;11917	11916					0.06705473788815652
GELTFHPKG	9	Unmodified	_GELTFHPKG_					0	0	0			REV__nc|ENSG00000166105|Q8NCI6-4|GLB1L3	REV__nc|ENSG00000166105|Q8NCI6-4|GLB1L3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.2579650878906	2	493.258717	984.50288	-1.4588	-0.00071956	1.4534	0.00071692	-0.0053517	-2.6398E-06	493.2595285153511	54.743	0.5271	54.743	54.471	54.998	0					42	21	3	0	0	0	0.58668	1	4613	4613		47.657	3.5405	1	233990	+		10425	21249	7343	7351	11918	11918					0.010009007547068904
GENFPCEEG	9	Unmodified	_GENFPCEEG_					0	0	0		nc|ENSG00000127084|Q5JSP0-2|FGD3;nc|ENSG00000127084|Q5JSP0-3|FGD3;ENSG00000127084|ENST00000375482|FGD3	nc|ENSG00000127084|Q5JSP0-2|FGD3	nc|ENSG00000127084|Q5JSP0-2|FGD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.186279296875	2	491.184557	980.354561	0.46609	0.00022894	1.5364	0.00075467	2.0025	0.0009836	491.1851925944041	64.496	1.2333	64.62	63.877	65.111	0.12396					67	44	2	0	0	0	0.76255	1	5676	5676		35.618	5.1146	1	159550			10426	3483	7344	7352	11919	11919					-0.13640198281302673
GENIGKHKV	9	Unmodified	_GENIGKHKV_					0	0	0		ENSG00000080200|ENST00000389622|CRYBG3	ENSG00000080200|ENST00000389622|CRYBG3	ENSG00000080200|ENST00000389622|CRYBG3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7959289550781	2	491.277441	980.540328	-0.17927	-8.8069E-05	-1.2642	-0.00062106	-1.4434	-0.00070912	491.27819781205324	46.82	0.18719	46.741	46.64	46.827	-0.079002					6	4	2	0	0	0	0.20789	1	3456	3456		14.865	0	1	31812			10427	1436	7345	7353	11920	11920					0.04927992020327565
GENSAVLHY	9	Unmodified	_GENSAVLHY_					0	0	0		nc|ENSG00000124299|P12955-3|PEPD;nc|ENSG00000124299|P12955-2|PEPD;ENSG00000124299|ENST00000244137|PEPD	nc|ENSG00000124299|P12955-3|PEPD	nc|ENSG00000124299|P12955-3|PEPD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.2364196777344	2	495.237981	988.461409	0.31297	0.00015499	-1.5714	-0.00077822	-1.2584	-0.00062323	495.23708670915266	41.442	0.60548	41.411	41.141	41.746	-0.030991					23	15	2	0	0	0	6.1523E-05	3	3032	3010;3021;3032		148.04	63.168	1	273740			10428	3328	7346	7354	11921;11922;11923	11923					-0.03328280004609496
GENSAVLHY	9	Unmodified	_GENSAVLHY_					0	0	0		nc|ENSG00000124299|P12955-3|PEPD;nc|ENSG00000124299|P12955-2|PEPD;ENSG00000124299|ENST00000244137|PEPD	nc|ENSG00000124299|P12955-3|PEPD	nc|ENSG00000124299|P12955-3|PEPD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	495.23699951171875	2	495.237981	988.461409	-1.1419	-0.00056551	-0.43937	-0.00021759	-1.5813	-0.0007831	495.2376508454839	41.363	0.53362	41.323	41.078	41.612	-0.04081					24	13	2	0	0	0	0.0080651	2	3117	3106;3117		134.81	37.338	1	351170			10429	3328	7346	7354	11924;11925	11925					-0.03328280004609496
GENSAVLHY	9	Unmodified	_GENSAVLHY_					0	0	0		nc|ENSG00000124299|P12955-3|PEPD;nc|ENSG00000124299|P12955-2|PEPD;ENSG00000124299|ENST00000244137|PEPD	nc|ENSG00000124299|P12955-3|PEPD	nc|ENSG00000124299|P12955-3|PEPD	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.2361755371094	2	495.237981	988.461409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.263	1	41.269	40.769	41.769	0.0065727								0	0	0	1.0846E-39	1	3027	3027		161.9	46.439	1				10430	3328	7346	7354	11926	11926					-0.03328280004609496
GENSAVLHY	9	Unmodified	_GENSAVLHY_					0	0	0		nc|ENSG00000124299|P12955-3|PEPD;nc|ENSG00000124299|P12955-2|PEPD;ENSG00000124299|ENST00000244137|PEPD	nc|ENSG00000124299|P12955-3|PEPD	nc|ENSG00000124299|P12955-3|PEPD	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.23870849609375	2	495.237981	988.461409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.334	1	41.34	40.84	41.84	0.0065727								0	0	0	8.6878E-13	1	3037	3037		134.81	60.556	1				10431	3328	7346	7354	11927	11927					-0.03328280004609496
GENSAVLHY	9	Unmodified	_GENSAVLHY_					0	0	0		nc|ENSG00000124299|P12955-3|PEPD;nc|ENSG00000124299|P12955-2|PEPD;ENSG00000124299|ENST00000244137|PEPD	nc|ENSG00000124299|P12955-3|PEPD	nc|ENSG00000124299|P12955-3|PEPD	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.2353820800781	2	495.237981	988.461409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.41	1	41.416	40.916	41.916	0.0065727								0	0	0	2.3366E-05	1	3048	3048		122.18	36.817	1				10432	3328	7346	7354	11928	11928					-0.03328280004609496
GEPDHNEAL	9	Unmodified	_GEPDHNEAL_					0	0	0		ENST00000457179.5_1_22:22317029-22324763:-|nuORF;ENST00000444502.5_1_22:22313806-22324763:-|nuORF;nc|ENSG00000100038|O95985-3|TOP3B;nc|ENSG00000100038|O95985-2|TOP3B;ENSG00000100038|ENST00000357179|TOP3B	ENST00000457179.5_1_22:22317029-22324763:-|nuORF	ENST00000457179.5_1_22:22317029-22324763:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2173767089844	2	491.217246	980.419939	-1.2074	-0.00059309	1.2337	0.00060601	0.026311	1.2925E-05	491.217698034564	29.055	1.2056	29.026	28.57	29.775	-0.029207					62	27	3	0	0	0	0.51592	1	1816	1816		51.193	8.7966	1	361790			10433	1790	7347	7355	11929	11929					-0.07105460763943938
GEPDHNEAL	9	Unmodified	_GEPDHNEAL_					0	0	0		ENST00000457179.5_1_22:22317029-22324763:-|nuORF;ENST00000444502.5_1_22:22313806-22324763:-|nuORF;nc|ENSG00000100038|O95985-3|TOP3B;nc|ENSG00000100038|O95985-2|TOP3B;ENSG00000100038|ENST00000357179|TOP3B	ENST00000457179.5_1_22:22317029-22324763:-|nuORF	ENST00000457179.5_1_22:22317029-22324763:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2164001464844	2	491.217246	980.419939	0.43716	0.00021474	-0.40408	-0.00019849	0.033075	1.6247E-05	491.21692699349103	29.205	1.3236	29.032	28.51	29.833	-0.17336					63	30	3	0	0	0	0.36616	1	1847	1847		60.118	6.7668	1	332230			10434	1790	7347	7355	11930	11930					-0.07105460763943938
GEPDPEFEAIL	11	Unmodified	_GEPDPEFEAIL_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.7903442382812	2	608.790244	1215.56593	0.43769	0.00026646	-0.15787	-9.6113E-05	0.27982	0.00017035	608.7900262899765	85.729	1.5961	86.172	85.584	87.18	0.44331					115	38	5	0	0	0	0.0015799	7	10021	9986;9997;10009;10021;10033;10045;10060		118.74	49.115	1	5815000			10435	8189	7348	7356	11931;11932;11933;11934;11935;11936;11937	11934					-0.03322623038570782
GEPDPEFEAIL	11	Unmodified	_GEPDPEFEAIL_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.7903442382812	2	608.790244	1215.56593	-0.27962	-0.00017023	0.51215	0.00031179	0.23253	0.00014156	608.7904596405984	85.767	1.7592	86.215	85.742	87.502	0.44736					129	42	5	0	0	0	0.0007937	6	10054	10030;10042;10054;10078;10091;10104		122.18	42.725	1	6047700			10436	8189	7348	7356	11938;11939;11940;11941;11942;11943	11940					-0.03322623038570782
GEPESSQPL	9	Unmodified	_GEPESSQPL_					0	0	0			REV__ENST00000394817.6_1_5:138456746-138463449:-|nuORF	REV__ENST00000394817.6_1_5:138456746-138463449:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.22296142578125	2	472.221997	942.429441	-1.0231	-0.00048314	1.3924	0.00065754	0.36932	0.0001744	472.22256154509336	38.81	0.52143	38.82	38.524	39.046	0.010708					29	15	2	0	0	0	0.55097	1	2346	2346		49.442	7.0454	1	181230	+		10437	26091	7349	7357	11944	11944					-0.04407692478412173
GEPGEVTMGLG	11	Oxidation (M)	_GEPGEVTM(Oxidation (M))GLG_		GEPGEVTM(1)GLG		GEPGEVTM(51)GLG	0	0	1			REV__ENST00000465821.5_1_9:130706892-130710398:-|nuORF	REV__ENST00000465821.5_1_9:130706892-130710398:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.7421264648438	2	531.742239	1061.46993	-0.58341	-0.00031022	0.81356	0.0004326	0.23015	0.00012238	531.7424675349406	41.841	0.61122	41.802	41.491	42.103	-0.038223					36	14	3	0	0	0	0.51007	1	3160	3160		51.193	11.94	1	453650	+		10438	21355	7350	7358	11945	11945		317			-0.05835094150302211
GEPIYGTI	8	Unmodified	_GEPIYGTI_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|182|3|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|182|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.22161865234375	2	425.221268	848.427984	-0.18345	-7.8007E-05	1.5354	0.00065288	1.3519	0.00057487	425.22178484975404	88.514	1.3777	88.582	88.093	89.471	0.068161					86	32	4	0	0	0	0.89494	1	8971	8971		37.159	5.2042	1	955500	+		10439	29589	7351	7359	11946	11946					-0.0022928177650101134
GEPLLKLL	8	Unmodified	_GEPLLKLL_					0	0	0		ENSG00000196549|ENST00000360490|MME	ENSG00000196549|ENST00000360490|MME	ENSG00000196549|ENST00000360490|MME	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7873229980469	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.85277	1	3474	3474		25.45	3.7478	1	493390			10440	8072	7352	7360	11947	11947					0.11308733942325944
GEPLSLID	8	Unmodified	_GEPLSLID_					0	0	0			REV__ENSG00000108839|ENST00000251535|ALOX12	REV__ENSG00000108839|ENST00000251535|ALOX12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5923156738281	2	422.226551	842.438549	0.67416	0.00028465	3.2154	0.0013576	3.8896	0.0016423	422.22802160746494	51.578	0.53796	52.245	51.979	52.517	0.6673					23	12	2	0	0	0	0.4196	1	5133	5133		30.504	3.7075	1	161960	+		10441	17735	7353	7361	11948	11948					0.011027008779137759
GEPQMIYDV	9	Unmodified	_GEPQMIYDV_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7817993164062	2	526.241875	1050.4692	-0.39171	-0.00020614	2.4784	0.0013042	2.0867	0.0010981	526.243916744862	47.443	0.30462	47.914	47.817	48.121	0.47139					9	7	2	0	0	0	0.20789	1	4547	4547		29.15	3.6994	1	339050	+		10442	22085	7354	7362	11949	11949					-0.054018887993379394
GEPSCLAH	8	Unmodified	_GEPSCLAH_					0	0	0			REV__ENSG00000146648|ENST00000275493|EGFR	REV__ENSG00000146648|ENST00000275493|EGFR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.1842346191406	2	407.18162	812.348688	2.4545	0.00099941	1.62	0.00065963	4.0744	0.001659	407.1826090336494	96.976	1.3902	97.381	97.011	98.402	0.40498					85	33	5	0	0	0	0.94132	1	11676	11676		54.765	10.234	1	3412500	+		10443	20025	7355	7363	11950	11950					-0.06499252002311096
GEPSCLAH	8	Unmodified	_GEPSCLAH_					0	0	0			REV__ENSG00000146648|ENST00000275493|EGFR	REV__ENSG00000146648|ENST00000275493|EGFR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.1839904785156	2	407.18162	812.348688	1.4808	0.00060295	2.1409	0.00087175	3.6217	0.0014747	407.18295907039726	98.627	1.0731	99.003	98.616	99.689	0.37679					79	26	5	0	0	0	0.88915	1	11953	11953		35.201	0	1	2838900	+		10444	20025	7355	7363	11951	11951					-0.06499252002311096
GEPSGGYTYT	10	Unmodified	_GEPSGGYTYT_					0	0	0		nc|ENSG00000134333|P00338-3|LDHA	nc|ENSG00000134333|P00338-3|LDHA	nc|ENSG00000134333|P00338-3|LDHA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3136596679688	2	516.219454	1030.42436	0.80864	0.00041744	-4.4053	-0.0022741	-3.5966	-0.0018567	516.7189543072348	99.655	0.21856	99.806	99.721	99.94	0.15073					5	4	2	0	0	0	0.37624	1	10399	10399		47.657	12.039	1	15602			10445	14932	7356	7364	11952	11952					-0.08963996341026359
GEPVQSEP	8	Unmodified	_GEPVQSEP_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.6995544433594	2	421.698158	841.381762	-0.18181	-7.6669E-05	1.0531	0.00044407	0.87125	0.00036741	421.69834318779186	58.402	0.61375	58.389	58.04	58.654	-0.013641					29	19	2	0	0	0	0.84341	1	5333	5333		24.203	0	1	93540			10446	5333	7357	7365	11953	11953					-0.045273466786056815
GEQDAVSIET	10	Unmodified	_GEQDAVSIET_					0	0	0			REV__ENST00000469753.5_1_2:46300785-46301094:+|nuORF	REV__ENST00000469753.5_1_2:46300785-46301094:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.7470092773438	2	524.743293	1047.47203	2.6144	0.0013719	1.7669	0.00092716	4.3813	0.0022991	524.74403987466	25.323	0.68957	24.892	24.582	25.272	-0.4311					33	15	3	0	0	0	0.33399	1	1294	1294		69.628	2.134	1	388080	+		10447	27199	7358	7366	11954	11954					-0.04980342140856919
GEQFVDMAE	9	Unmodified	_GEQFVDMAE_					0	0	0			REV__ENST00000493672.1_1_16:103905-105855:+|nuORF	REV__ENST00000493672.1_1_16:103905-105855:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7593994140625	2	513.215857	1024.41716	-0.84343	-0.00043286	-1.2142	-0.00062316	-2.0576	-0.001056	513.2150490240336	43.155	0.37385	43.588	43.336	43.71	0.4334					12	8	2	0	0	0	0.20789	1	3851	3851		14.865	5.1592	1	103600	+		10448	27699	7359	7367	11955	11955					-0.0940705221311191
GEQGPLTL	8	Unmodified	_GEQGPLTL_					0	0	0		ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.7208251953125	2	407.718893	813.423233	2.692	0.0010976	1.3451	0.00054843	4.0371	0.001646	407.71961983038284	102.12	1.3069	102.42	101.63	102.94	0.29865					72	31	4	0	0	0	0.85277	1	12444	12444		25.45	1.2474	1	5871700			10449	7840	7360	7368	11956	11956					0.009058340807087006
GEQHLIVKRK	10	Unmodified	_GEQHLIVKRK_					0	0	0			REV__ENSG00000198838|ENST00000634891|RYR3	REV__ENSG00000198838|ENST00000634891|RYR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3650512695312	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.8505	1	12886	12886		19.104	0.77911	1	5984800	+		10450	23393	7361	7369	11957	11957					0.12459876308253115
GEQLGIKLVRR	11	Unmodified	_GEQLGIKLVRR_					0	0	0		ENSG00000139517|ENST00000316334|LNX2	ENSG00000139517|ENST00000316334|LNX2	ENSG00000139517|ENST00000316334|LNX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8931274414062	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.66929	1	11357	11357		36.447	7.2767	1	66671000			10451	4375	7362	7370	11958	11958					0.1492783437106482
GEQPRKPRLL	10	Unmodified	_GEQPRKPRLL_					0	0	0		ENSG00000130385|ENST00000252677|BMP15	ENSG00000130385|ENST00000252677|BMP15	ENSG00000130385|ENST00000252677|BMP15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.3597412109375	2	597.359296	1192.70404	0.89294	0.00053341	-2.814	-0.001681	-1.921	-0.0011475	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.86272	1	10534	10534		24.519	2.5593	1	2674200			10452	3643	7363	7371	11959	11959					0.11539589791209437
GEQVQIFLNY	10	Unmodified	_GEQVQIFLNY_					0	0	0		ENSG00000137860|ENST00000347644|SLC28A2	ENSG00000137860|ENST00000347644|SLC28A2	ENSG00000137860|ENST00000347644|SLC28A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.9122314453125	3	404.208273	1209.60299	0.15625	6.3158E-05	-2.6077	-0.0010541	-2.4515	-0.00099091	404.20738655735266	30.798	0.48778	30.877	30.634	31.121	0.079834					15	10	2	0	0	0	0.37624	1	2029	2029		45.022	15.471	1	26924			10453	4242	7364	7372	11960	11960					0.006570932978547717
GERLRRHF	8	Unmodified	_GERLRRHF_					0	0	0		ENSG00000260903|ENST00000562532|XKR7	ENSG00000260903|ENST00000562532|XKR7	ENSG00000260903|ENST00000562532|XKR7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.267578125	2	535.801949	1069.58934	2.2009	0.0011793	-0.049694	-2.6626E-05	2.1512	0.0011526	535.8018419177928	25.96	0.47119	25.529	25.312	25.784	-0.4311					17	10	2	0	0	0	0.4196	1	1377	1377		19.36	6.4008	1	90557			10454	8920	7365	7373	11961	11961					0.05733325099936337
GERPAFKC	8	Unmodified	_GERPAFKC_					0	0	0			REV__nc|ENSG00000166145|O43278|SPINT1	REV__nc|ENSG00000166145|O43278|SPINT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	454.2257385253906	2	454.226362	906.438172	-1.2976	-0.00058941	-2.5074	-0.0011389	-3.805	-0.0017284	454.2251364470207	79.856	1.9333	79.856	78.763	80.697	0					107	74	2	0	0	0	0.84341	1	7441	7441		24.203	1.1603	1	88508	+		10455	21255	7366	7374	11962	11962					-0.018789973229331736
GERRQRPK	8	Unmodified	_GERRQRPK_					0	0	0		nc|ENSG00000143409|Q8N5J2-2|MINDY1;nc|ENSG00000143409|Q8N5J2-4|MINDY1;ENSG00000143409|ENST00000683666|MINDY1;nc|ENSG00000143409|Q8N5J2-3|MINDY1	nc|ENSG00000143409|Q8N5J2-2|MINDY1	nc|ENSG00000143409|Q8N5J2-2|MINDY1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.7682495117188	2	513.799406	1025.58426	0.64285	0.0003303	-0.8946	-0.00045965	-0.25175	-0.00012935	513.7987618527093	16.284	0.27704	15.685	15.555	15.832	-0.59873					10	5	3	0	0	0	0.4196	1	100	100		10.866	0	1	106680			10456	4626	7367	7375	11963	11963					0.0724902123731681
GERTAPIV	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GERTAPIV_					1	0	0			REV__AluSp_dup48944|chr21:8406155-8406395:-|1.2201026638424088|0.3319044745033751|1.88|58.0|3|2|sense	REV__AluSp_dup48944|chr21:8406155-8406395:-|1.2201026638424088|0.3319044745033751|1.88|58.0|3|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7447204589844	2	442.745442	883.476331	0.24971	0.00011056	-1.799	-0.0007965	-1.5493	-0.00068594	442.74454650481835	88.729	0.69301	89.178	88.753	89.446	0.44892					54	16	4	0	0	0	0.9295	1	10447	10447		55.504	7.5886	1	6816600	+		10457	15388	7368	7376	11964	11964					0.029932118633610116
GESAVGKSSL	10	Unmodified	_GESAVGKSSL_					0	0	0		nc|ENSG00000144566|P20339-2|RAB5A;ENSG00000144566|ENST00000273047|RAB5A;ENSG00000111540|ENST00000360299|RAB5B;ENSG00000108774|ENST00000346213|RAB5C;nc|ENSG00000108774|P51148-2|RAB5C;ENST00000476544.1_1_3:19992384-19992582:+|nuORF;ENST00000550013.1_1_17:40282343-40282577:-|nuORF;ENST00000546810.1_1_12:56367874-56383936:+|nuORF;nc|ENSG00000111540|P61020-2|RAB5B	nc|ENSG00000144566|P20339-2|RAB5A	nc|ENSG00000144566|P20339-2|RAB5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7471008300781	2	467.745639	933.476725	-1.1505	-0.00053813	1.4917	0.00069774	0.34122	0.0001596	467.7462378397115	29.312	0.56375	29.282	29.04	29.604	-0.029207					26	12	3	0	0	0	0.25577	1	1844	1844		77.533	3.5585	1	265560			10458	2430	7369	7377	11965	11965					0.007325867925828788
GESAVGKSSL	10	Unmodified	_GESAVGKSSL_					0	0	0		nc|ENSG00000144566|P20339-2|RAB5A;ENSG00000144566|ENST00000273047|RAB5A;ENSG00000111540|ENST00000360299|RAB5B;ENSG00000108774|ENST00000346213|RAB5C;nc|ENSG00000108774|P51148-2|RAB5C;ENST00000476544.1_1_3:19992384-19992582:+|nuORF;ENST00000550013.1_1_17:40282343-40282577:-|nuORF;ENST00000546810.1_1_12:56367874-56383936:+|nuORF;nc|ENSG00000111540|P61020-2|RAB5B	nc|ENSG00000144566|P20339-2|RAB5A	nc|ENSG00000144566|P20339-2|RAB5A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	467.745639	933.476725	0.091177	4.2648E-05	-0.02201	-1.0295E-05	0.069167	3.2353E-05	467.74548997540757	29.502	0.60186	29.412	29.104	29.706	-0.089546	0.06484	-0.00061209	NaN	77.533	25	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	284270			10459	2430	7369	7377							0.007325867925828788
GESDDSILRL	10	Unmodified	_GESDDSILRL_					0	0	0		ENST00000370562.1_1_20:60963217-60963421:+|nuORF;ENSG00000171858|ENST00000343986|RPS21	ENST00000370562.1_1_20:60963217-60963421:+|nuORF	ENST00000370562.1_1_20:60963217-60963421:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.7806396484375	2	552.78021	1103.54587	-1.2452	-0.00068831	0.72944	0.00040322	-0.51574	-0.00028509	552.7805235870305	60.116	1.0859	60.507	60.055	61.14	0.39077					81	29	4	0	0	0	7.4855E-07	9	6327	6327;6337;6348;6358;6368;6378;6389;6400;6409		150.36	53.004	1	7487300			10460	6720	7370	7378	11966;11967;11968;11969;11970;11971;11972;11973;11974	11966					-0.0017637397852467984
GESDDSILRL	10	Unmodified	_GESDDSILRL_					0	0	0		ENST00000370562.1_1_20:60963217-60963421:+|nuORF;ENSG00000171858|ENST00000343986|RPS21	ENST00000370562.1_1_20:60963217-60963421:+|nuORF	ENST00000370562.1_1_20:60963217-60963421:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7802124023438	2	552.78021	1103.54587	-0.6954	-0.00038441	0.15752	8.7075E-05	-0.53788	-0.00029733	552.7801805494038	59.947	1.0208	60.5	60.16	61.18	0.55323					77	27	4	0	0	0	1.6727E-07	10	6349	6330;6339;6349;6361;6373;6383;6392;6403;6414;6421		155.58	64.984	1	6715200			10461	6720	7370	7378	11975;11976;11977;11978;11979;11980;11981;11982;11983;11984	11977					-0.0017637397852467984
GESGIKVAVL	10	Unmodified	_GESGIKVAVL_					0	0	0		ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	ENSG00000164091|ENST00000296490|WDR82	ENSG00000164091|ENST00000296490|WDR82	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.7898864746094	2	486.78985	971.565146	-0.010386	-5.056E-06	-0.22893	-0.00011144	-0.23932	-0.0001165	486.78964812550777	52.363	0.8278	53.03	52.715	53.543	0.66729					45	19	3	0	0	0	0.18075	2	5252	5241;5252		90.601	18.723	1	1913700			10462	5916	7371	7379	11985;11986	11986					0.07822627103041668
GESHVSGTTTL	11	Unmodified	_GESHVSGTTTL_					0	0	0		ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22;chr17:21028674-21043626|50|13.74|0.68|4.33|-|ENST00000537526|USP22,USP22;ENSG00000124422|ENST00000261497|USP22	ENST00000478443.1_1_17:20910195-20914666:-|nuORF	ENST00000478443.1_1_17:20910195-20914666:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.7644653320312	2	544.76456	1087.51457	-1.0809	-0.00058882	1.1647	0.00063448	0.083823	4.5664E-05	544.7650482422581	31.707	0.59852	31.786	31.514	32.113	0.079834					38	13	4	0	0	0	0.14238	3	2163	2152;2163;2174		82.75	9.8712	1	935830			10463	218	7372	7380	11987;11988;11989	11988					-0.025689470126280867
GESHVSGTTTL	11	Unmodified	_GESHVSGTTTL_					0	0	0		ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22;chr17:21028674-21043626|50|13.74|0.68|4.33|-|ENST00000537526|USP22,USP22;ENSG00000124422|ENST00000261497|USP22	ENST00000478443.1_1_17:20910195-20914666:-|nuORF	ENST00000478443.1_1_17:20910195-20914666:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.7640991210938	2	544.76456	1087.51457	0.22201	0.00012094	-0.42308	-0.00023048	-0.20107	-0.00010953	544.7642467295972	31.673	0.64062	31.781	31.505	32.146	0.10707					39	14	4	0	0	0	0.085268	2	2174	2165;2174		95.815	26.188	1	1107600			10464	218	7372	7380	11990;11991	11991					-0.025689470126280867
GETELREYF	9	Unmodified	_GETELREYF_					0	0	0		ENST00000586579.5_1_19:1407772-1428848:+|nuORF;ENST00000589484.5_1_19:1417247-1428848:+|nuORF;nc|ENSG00000071626|Q96EP5-2|DAZAP1;ENSG00000071626|ENST00000233078|DAZAP1	ENST00000586579.5_1_19:1407772-1428848:+|nuORF	ENST00000586579.5_1_19:1407772-1428848:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	572.2687377929688	2	572.269478	1142.5244	-1.0863	-0.00062164	1.1777	0.00067396	0.091416	5.2314E-05	572.2696980177476	59.49	0.55699	59.476	59.196	59.753	-0.013733					29	14	3	0	0	0	0.76853	1	5470	5470		33.922	1.9668	1	138650			10465	1259	7373	7381	11992	11992					-0.04115759007231645
GETELREYF	9	Unmodified	_GETELREYF_					0	0	0		ENST00000586579.5_1_19:1407772-1428848:+|nuORF;ENST00000589484.5_1_19:1417247-1428848:+|nuORF;nc|ENSG00000071626|Q96EP5-2|DAZAP1;ENSG00000071626|ENST00000233078|DAZAP1	ENST00000586579.5_1_19:1407772-1428848:+|nuORF	ENST00000586579.5_1_19:1407772-1428848:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.26953125	2	572.269478	1142.5244	-0.40078	-0.00022935	-0.14917	-8.5365E-05	-0.54995	-0.00031472	572.2691607726102	59.355	0.59389	59.388	59.135	59.729	0.03318					23	13	2	0	0	0	0.54908	1	5474	5474		49.536	7.1399	1	163350			10466	1259	7373	7381	11993	11993					-0.04115759007231645
GETPEVVI	8	Unmodified	_GETPEVVI_					0	0	0			REV__ENSG00000213626|ENST00000395323|LBH	REV__ENSG00000213626|ENST00000395323|LBH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2280578613281	2	422.226551	842.438549	-0.30034	-0.00012681	3.9543	0.0016696	3.654	0.0015428	422.22807899048587	64.416	1.0603	64.382	64.026	65.086	-0.034248					75	29	3	0	0	0	0.86791	1	6134	6134		28.254	1.4582	1	581950	+		10467	23625	7374	7382	11994	11994					0.011027008779137759
GETTAKVLK	9	Unmodified	_GETTAKVLK_					0	0	0		ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.7822570800781	2	473.782025	945.549496	0.76185	0.00036095	-0.19655	-9.3122E-05	0.5653	0.00026783	473.7817677101334	35.068	1.0676	35.316	34.976	36.043	0.24769					87	27	4	0	0	0	0.15959	1	2679	2679		82.241	14.747	1	2207000			10468	4496	7375	7383	11995	11995					0.07454340585991304
GEVDPKVAL	9	Unmodified	_GEVDPKVAL_					0	0	0		ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF	ENSG00000099795|ENST00000215565|NDUFB7	ENSG00000099795|ENST00000215565|NDUFB7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2621765136719	2	464.260925	926.507297	-1.0892	-0.00050567	0.91479	0.0004247	-0.1744	-8.0965E-05	464.2612855868855	46.503	0.45966	47.426	47.191	47.651	0.92315					17	10	2	0	0	0	0.19437	2	4409	4397;4409		75.043	12.529	1	1385200			10469	1765	7376	7384	11996;11997	11997					0.04110365177609765
GEVDPKVAL	9	Unmodified	_GEVDPKVAL_					0	0	0		ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF	ENSG00000099795|ENST00000215565|NDUFB7	ENSG00000099795|ENST00000215565|NDUFB7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	464.260925	926.507297	-1.2077	-0.00056071	0.93421	0.00043372	-0.27354	-0.00012699	464.26131686867745	46.692	0.53229	47.163	46.856	47.388	0.47139	-0.13144	4.7859E-06	NaN	75.043	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1587300			10470	1765	7376	7384							0.04110365177609765
GEVELGYL	8	Unmodified	_GEVELGYL_					0	0	0		ENST00000560978.1_2_15:41689296-41694683:-|nuORF	ENST00000560978.1_2_15:41689296-41694683:-|nuORF	ENST00000560978.1_2_15:41689296-41694683:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.22442626953125	2	440.226551	878.438549	-0.39046	-0.00017189	-2.5544	-0.0011245	-2.9448	-0.0012964	440.2253113144555	16.926	0.22956	16.847	16.752	16.982	-0.079056					14	7	3	0	0	0	0.92176	1	165	165		46.766	2.6496	1	94665			10471	13826	7377	7385	11998	11998					-0.005532991220889016
GEVIILLDCF	10	Unmodified	_GEVIILLDCF_					0	0	0			REV__nc|ENSG00000177888|Q5SVQ8-2|ZBTB41	REV__nc|ENSG00000177888|Q5SVQ8-2|ZBTB41	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.341796875	2	561.299193	1120.58383	1.1147	0.00062566	3.9136	0.0021967	5.0283	0.0028224	561.3013230130285	18.28	0.37189	17.803	17.518	17.89	-0.47694					11	7	2	0	0	0	0.37624	1	343	343		35.618	3.6634	1	20301	+		10472	22235	7378	7386	11999	11999					0.028364206825926885
GEVIPVMELL	10	Unmodified	_GEVIPVMELL_					0	0	0		ENSG00000147894|ENST00000380003|C9orf72;nc|nan|Q96LT7-2|C9orf72;ENST00000488117.5_1_9:27560206-27567121:-|nuORF	ENSG00000147894|ENST00000380003|C9orf72	ENSG00000147894|ENST00000380003|C9orf72	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.31787109375	2	550.307018	1098.59948	1.2749	0.00070158	-3.6207	-0.0019925	-2.3458	-0.0012909	550.3052560835923	100.95	0.96908	101	100.25	101.22	0.046356					28	22	2	0	0	0	0.37624	1	10842	10842		19.104	0	1	107140			10473	4928	7379	7387	12000	12000					0.054127071996617815
GEVLGIPK	8	Unmodified	_GEVLGIPK_					0	0	0			REV__ENST00000424720.2_12:132824120-132905933:-|nuORF	REV__ENST00000424720.2_12:132824120-132905933:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2568664550781	2	406.747453	811.480354	0.3977	0.00016177	3.1669	0.0012881	3.5646	0.0014499	406.74874074936446	63.333	0.63582	63.456	63.24	63.876	0.12252					33	27	2	0	0	0	0.4196	1	5550	5550		3.6843	0.27433	1	85300	+		10474	22556	7380	7388	12001	12001					0.06707301357084816
GEVLIAVLL	9	Unmodified	_GEVLIAVLL_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H;REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I;REV__ENSG00000006283|ENST00000359106|CACNA1G	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.7997741699219	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.7932	1	3354	3354		24.203	4.8428	1	210360	+		10475	23145;17176;16099	7381	7389	12002	12002					0.11905003113804469
GEVPDGYS	8	Unmodified	_GEVPDGYS_					0	0	0		nc|ENSG00000211713|A0A1B0GX49|TRBV6-4	nc|ENSG00000211713|A0A1B0GX49|TRBV6-4	nc|ENSG00000211713|A0A1B0GX49|TRBV6-4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.1758117675781	2	412.177058	822.339563	-0.18655	-7.6891E-05	-3.0083	-0.00124	-3.1949	-0.0013168	412.17579267785936	95.368	1.8182	95.435	94.838	96.656	0.066727					99	42	3	0	0	0	0.92457	1	9994	9994		47.916	14.423	1	1871100			10476	15232	7382	7390	12003	12003					-0.0787132208698722
GEVPDGYS	8	Unmodified	_GEVPDGYS_					0	0	0		nc|ENSG00000211713|A0A1B0GX49|TRBV6-4	nc|ENSG00000211713|A0A1B0GX49|TRBV6-4	nc|ENSG00000211713|A0A1B0GX49|TRBV6-4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.17572021484375	2	412.177058	822.339563	-1.8024	-0.00074289	-1.9218	-0.00079214	-3.7242	-0.001535	412.1764055196895	94.607	2.9265	94.838	94.324	97.25	0.23103					168	69	5	0	0	0	0.84341	1	9670	9670		24.203	1.1603	1	14636000			10477	15232	7382	7390	12004	12004					-0.0787132208698722
GEVRMGLGL	9	Unmodified	_GEVRMGLGL_					0	0	0		ENST00000462953.1_1_2:242436889-242437667:-|nuORF	ENST00000462953.1_1_2:242436889-242437667:-|nuORF	ENST00000462953.1_1_2:242436889-242437667:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2522888183594	2	466.25512	930.495686	-0.068934	-3.2141E-05	-2.0741	-0.00096706	-2.143	-0.0009992	466.25405568860674	62.979	1.1346	62.945	62.242	63.376	-0.033714					88	53	2	0	0	0	0.78983	1	5987	5987		27.882	1.1893	1	153380			10478	12056	7383	7391	12005	12005					0.027658448826400672
GEVVAVIVSP	10	Unmodified	_GEVVAVIVSP_					0	0	0			REV__ENSG00000057468|ENST00000263187|MSH4	REV__ENSG00000057468|ENST00000263187|MSH4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.2864990234375	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.947	1	74.992	74.492	75.492	0.04509								0	0	0	0.45132	1	7272	7272		27.882	1.0861	1		+		10479	16427	7384	7392	12006	12006					0.06871224728763536
GEVVDQGSTNL	11	Unmodified	_GEVVDQGSTNL_					0	0	0		nc|ENSG00000148700|Q9UEY8-2|ADD3;ENSG00000148700|ENST00000356080|ADD3	nc|ENSG00000148700|Q9UEY8-2|ADD3	nc|ENSG00000148700|Q9UEY8-2|ADD3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.772216796875	2	559.769842	1117.52513	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.512	1	47.983	47.483	48.483	0.47139								0	0	0	0.12189	1	4527	4527		80.916	5.8729	1				10480	4978	7385	7393	12007	12007					-0.028929643581932396
GEVVDQGSTNL	11	Unmodified	_GEVVDQGSTNL_					0	0	0		nc|ENSG00000148700|Q9UEY8-2|ADD3;ENSG00000148700|ENST00000356080|ADD3	nc|ENSG00000148700|Q9UEY8-2|ADD3	nc|ENSG00000148700|Q9UEY8-2|ADD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.7706298828125	2	559.769842	1117.52513	-0.83403	-0.00046687	-0.71596	-0.00040077	-1.55	-0.00086764	559.7699904855873	47.427	0.91261	48.35	47.871	48.784	0.92315					47	22	3	0	0	0	0.17527	1	4522	4522		80.916	22.134	1	1599600			10481	4978	7385	7393	12008	12008					-0.028929643581932396
GEVVIIVVV	9	Unmodified	_GEVVIIVVV_					0	0	0		ENST00000491414.5_1_2:27715265-27717055:-|nuORF;ENSG00000115226|ENST00000264703|FNDC4	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8012390136719	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	2976	2976		26.796	0	1	942760			10482	2820	7386	7394	12009	12009					0.11905003113815837
GEVVIIVVV	9	Unmodified	_GEVVIIVVV_					0	0	0		ENST00000491414.5_1_2:27715265-27717055:-|nuORF;ENSG00000115226|ENST00000264703|FNDC4	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8011779785156	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	3203	3203		13.775	0	1	1231300			10483	2820	7386	7394	12010	12010					0.11905003113815837
GEVVIIVVV	9	Unmodified	_GEVVIIVVV_					0	0	0		ENST00000491414.5_1_2:27715265-27717055:-|nuORF;ENSG00000115226|ENST00000264703|FNDC4	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8006591796875	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.7932	1	3121	3121		18.324	0.95945	1	1091400			10484	2820	7386	7394	12011	12011					0.11905003113815837
GEVVIIVVV	9	Unmodified	_GEVVIIVVV_					0	0	0		ENST00000491414.5_1_2:27715265-27717055:-|nuORF;ENSG00000115226|ENST00000264703|FNDC4	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7997741699219	2	463.799686	925.584819	-1.0368	-0.00048089	1.6712	0.0007751	0.63436	0.00029422	463.8001871044515	43.902	0.88562	44.352	43.805	44.691	0.45025					46	21	3	0	0	0	0.7932	1	4025	4025		26.796	0	1	854910			10485	2820	7386	7394	12012	12012					0.11905003113815837
GEWEESEVKL	10	Unmodified	_GEWEESEVKL_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	603.2872314453125	2	603.287868	1204.56118	-0.34872	-0.00021038	0.2836	0.00017109	-0.065113	-3.9282E-05	603.2881086087548	57.241	1.2848	57.635	57.326	58.611	0.39407					67	31	4	0	0	0	0.00059979	4	5955	5918;5929;5941;5955		140.11	63.943	1	5721200			10486	3371	7387	7395	12013;12014;12015;12016	12016					-0.0329150718132496
GEWEESEVKL	10	Unmodified	_GEWEESEVKL_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.2883911132812	2	603.287868	1204.56118	0.52871	0.00031896	-0.65241	-0.00039359	-0.1237	-7.4627E-05	603.2875576853429	57.071	1.0353	57.626	57.313	58.349	0.55512					64	25	4	0	0	0	0.00059979	5	5929	5918;5929;5940;5952;5966		140.11	65.069	1	5535200			10487	3371	7387	7395	12017;12018;12019;12020;12021	12018					-0.0329150718132496
GFAALKLI	8	Unmodified	_GFAALKLI_					0	0	0			REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I	REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.23956298828125	2	416.768189	831.521825	-1.0538	-0.00043919	-3.1009	-0.0012923	-4.1547	-0.0017315	416.76853476644555	88.248	0.11658	88.711	88.634	88.75	0.46312					4	2	2	0	0	0	0.4196	1	10424	10424		20.482	11.011	1	18892	+		10488	17176	7388	7396	12022	12022					0.09932482116414576
GFALPPPLAPS	11	Unmodified	_GFALPPPLAPS_					0	0	0		ENST00000583444.1_1_17:80187265-80187778:+|nuORF	ENST00000583444.1_1_17:80187265-80187778:+|nuORF	ENST00000583444.1_1_17:80187265-80187778:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.786865234375	2	533.800217	1065.58588	0.37506	0.00020021	2.383	0.0012721	2.7581	0.0014723	533.8014153160593	29.273	0.86163	29.127	28.873	29.735	-0.14611					32	19	2	0	0	0	0.1725	1	1828	1828		20.947	2.6848	1	751800			10489	14121	7389	7397	12023	12023					0.055712174827021954
GFALRSKVRA	10	Unmodified	_GFALRSKVRA_					0	0	0			REV__ENSG00000111271|ENST00000313698|ACAD10	REV__ENSG00000111271|ENST00000313698|ACAD10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8325805664062	2	552.835457	1103.65636	-0.74602	-0.00041243	-1.6881	-0.00093326	-2.4342	-0.0013457	552.8344221073519	82.073	1.2669	82.073	81.549	82.816	0					61	32	2	0	0	0	0.86763	1	7695	7695		26.693	1.1189	1	174970	+		10490	17858	7390	7398	12024	12024					0.10867935591022615
GFAQVLLFLR	10	Unmodified	_GFAQVLLFLR_					0	0	0			REV__ENSG00000185163|ENST00000397333|DDX51	REV__ENSG00000185163|ENST00000397333|DDX51	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353515625	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.66	1	113.64	113.14	114.14	-0.024811								0	0	0	0.45132	1	12579	12579		20.947	1.587	1		+		10491	22742	7391	7399	12025	12025					0.1114287453635825
GFCIDILKRL	10	Unmodified	_GFCIDILKRL_					0	0	0		ENSG00000105464|ENST00000263269|GRIN2D	ENSG00000105464|ENST00000263269|GRIN2D	ENSG00000105464|ENST00000263269|GRIN2D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.343505859375	2	589.341726	1176.6689	-0.65438	-0.00038565	2.6476	0.0015603	1.9932	0.0011747	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.86218	1	10273	10273		32.812	3.6424	1	16804000			10492	2219	7392	7400	12026	12026					0.08763210939059718
GFCIDILKRL	10	Unmodified	_GFCIDILKRL_					0	0	0		ENSG00000105464|ENST00000263269|GRIN2D	ENSG00000105464|ENST00000263269|GRIN2D	ENSG00000105464|ENST00000263269|GRIN2D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3432006835938	2	589.341726	1176.6689	0.15554	9.1664E-05	1.9962	0.0011764	2.1517	0.0012681	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.8608	1	11273	11273		34.173	3.8548	1	10540000			10493	2219	7392	7400	12027	12027					0.08763210939059718
GFCRIGLKLL	10	Unmodified	_GFCRIGLKLL_					0	0	0		ENST00000573539.5_1_17:3442880-3458098:-|nuORF	ENST00000573539.5_1_17:3442880-3458098:-|nuORF	ENST00000573539.5_1_17:3442880-3458098:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3432006835938	2	560.338987	1118.66342	3.1454	0.0017625	-0.73406	-0.00041132	2.4113	0.0013512	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.46422	1	13052	13052		58.782	25.266	1	151040			10494	14021	7393	7401	12028	12028					0.10883532147249753
GFCVTVKM	8	Unmodified	_GFCVTVKM_					0	0	0			REV__ENST00000471958.1_1_2:205410662-205422749:+|nuORF	REV__ENST00000471958.1_1_2:205410662-205422749:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.7224426269531	2	442.722067	883.429581	0.37012	0.00016386	0.96727	0.00042823	1.3374	0.00059209	442.7222188277578	27.775	1.2287	27.811	27.475	28.704	0.03607					60	39	2	0	0	0	0.91005	1	1285	1285		42.474	5.446	1	168890	+		10495	27248	7394	7402	12029	12029					-0.01679687283774456
GFCVTVKM	8	Unmodified	_GFCVTVKM_					0	0	0			REV__ENST00000471958.1_1_2:205410662-205422749:+|nuORF	REV__ENST00000471958.1_1_2:205410662-205422749:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.72265625	2	442.722067	883.429581	1.3757	0.00060905	-0.065546	-2.9019E-05	1.3102	0.00058003	442.72174062194034	27.904	1.1856	27.881	27.606	28.792	-0.023556					62	28	3	0	0	0	0.87922	1	1314	1314		31.955	2.8053	1	143380	+		10496	27248	7394	7402	12030	12030					-0.01679687283774456
GFDVKHLK	8	Unmodified	_GFDVKHLK_					0	0	0			REV__ENST00000357628.7_1_7:124538411-124568991:-|nuORF	REV__ENST00000357628.7_1_7:124538411-124568991:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2877197265625	2	472.271627	942.528701	2.0072	0.00094793	-3.2456	-0.0015328	-1.2384	-0.00058487	472.2703416118792	95.384	0.95644	95.327	94.893	95.849	-0.057526					46	22	3	0	0	0	0.4196	1	10133	10133		40.573	15.122	1	783100	+		10497	25419	7395	7403	12031	12031					0.05513794996988963
GFFFFVKAMAV	11	Unmodified	_GFFFFVKAMAV_					0	0	0		ENST00000503755.5_1_5:87502254-87524301:-|nuORF;nc|ENSG00000164180|Q8NDZ6-3|TMEM161B;ENST00000457388.1_1_10:37626656-37627235:+|nuORF;nc|ENSG00000164180|Q8NDZ6-2|TMEM161B;ENSG00000164180|ENST00000296595|TMEM161B	ENST00000503755.5_1_5:87502254-87524301:-|nuORF	ENST00000503755.5_1_5:87502254-87524301:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.89263916015625	3	421.891339	1262.65219	-1.8665	-0.00078747	1.9669	0.00082983	0.10039	4.2356E-05	421.8920663173041	29.324	1.0664	29.391	29.078	30.145	0.066727					131	48	5	0	0	0	0.72228	1	1224	1224		24.232	0	1	728440			10498	5934	7396	7404	12032	12032					0.031367100531042524
GFFFSDNACG	10	Unmodified	_GFFFSDNACG_					0	0	0		ENST00000488559.6_1_9:130943037-130953136:-|nuORF	ENST00000488559.6_1_9:130943037-130953136:-|nuORF	ENST00000488559.6_1_9:130943037-130953136:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8167724609375	2	532.710742	1063.40693	1.2111	0.00064516	4.3496	0.0023171	5.5607	0.0029622	532.7130492945344	89.366	0.43434	89.415	89.224	89.658	0.048164					10	9	2	0	0	0	0.37624	1	9233	9233		34.173	12.213	1	30813			10499	12633	7397	7405	12033	12033					-0.12223615147695455
GFFLPLFPL	9	Unmodified	_GFFLPLFPL_					0	0	0			REV__ENST00000215838.7_1_22:31003025-31003232:+|nuORF	REV__ENST00000215838.7_1_22:31003025-31003232:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.6336059570312	2	525.804771	1049.59499	-0.71604	-0.0003765	3.3055	0.001738	2.5894	0.0013615	525.8066772633971	38.88	0.47501	38.833	38.601	39.076	-0.047001					17	10	2	0	0	0	0.20789	1	2722	2722		14.664	0	1	56648	+		10500	24119	7398	7406	12034	12034					0.07217610839029476
GFGAAKNLCV	10	Unmodified	_GFGAAKNLCV_					0	0	0		ENST00000470545.1_1_21:45556883-45557341:+|nuORF;ENST00000488392.1_1_21:45556005-45557341:+|nuORF	ENST00000470545.1_1_21:45556883-45557341:+|nuORF	ENST00000470545.1_1_21:45556883-45557341:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.2580261230469	2	490.25512	978.495686	4.4093	0.0021617	1.3805	0.0006768	5.7898	0.0028385	490.2556618815464	107.13	2.0845	107.27	105.83	107.92	0.14929					167	83	3	0	0	0	0.86482	1	13119	13119		25.45	0.94616	1	1494000			10501	12223	7399	7407	12035	12035					0.005578448826213389
GFGAGPGA	8	Unmodified	_GFGAGPGA_					0	0	0			REV__ENST00000337979.8_1_11:59522641-59522929:+|nuORF	REV__ENST00000337979.8_1_11:59522641-59522929:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.2979736328125	1	633.299101	632.291825	-0.1538	-9.74E-05	-3.6594	-0.0023175	-3.8132	-0.0024149	633.2967414359904	64.234	3.2468	64.233	62.44	65.687	-0.00078583					193	132	2	0	0	0	0.80127	1	6051	6051		16.705	0	1	198180	+		10502	25211	7400	7408	12036	12036					-0.03902931496531892
GFGARVII	8	Unmodified	_GFGARVII_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2584228515625	2	416.755613	831.496673	-1.8506	-0.00077126	0.10209	4.2548E-05	-1.7485	-0.00072871	416.75557522436884	61.768	0.68303	61.875	61.612	62.295	0.10743					75	30	4	0	0	0	0.85787	1	5356	5356		9.4706	0	1	1296100			10503	1943	7401	7409	12037	12037					0.07418427313859866
GFGARVII	8	Unmodified	_GFGARVII_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2589111328125	2	416.755613	831.496673	0.59337	0.00024729	-1.906	-0.00079433	-1.3126	-0.00054705	416.75478578495375	57.11	1.326	57.665	57.355	58.681	0.55513					86	32	4	0	0	0	0.81548	1	5919	5919		20.482	2.1574	1	8175400			10504	1943	7401	7409	12038	12038					0.07418427313859866
GFGARVII	8	Unmodified	_GFGARVII_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	416.755613	831.496673	-1.5592	-0.0006498	-0.41484	-0.00017289	-1.974	-0.00082268	416.75551893250343	62.096	0.68346	62.096	61.902	62.586	0	0.039798	0.00074207	NaN	9.4706	48	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116920			10505	1943	7401	7409							0.07418427313859866
GFGARVII	8	Unmodified	_GFGARVII_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	416.755613	831.496673	-0.18886	-7.8708E-05	-1.4847	-0.00061875	-1.6735	-0.00069746	416.7548771058352	62.174	0.69403	62.164	61.823	62.517	-0.0094147	0.10806	-0.00014965	NaN	9.4706	65	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	544760			10506	1943	7401	7409							0.07418427313859866
GFGARVII	8	Unmodified	_GFGARVII_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	416.755613	831.496673	-0.071616	-2.9846E-05	-1.539	-0.00064139	-1.6106	-0.00067124	416.75484580405214	62.157	0.75181	62.124	61.801	62.553	-0.033169	0.06768	-0.00019494	NaN	9.4706	60	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	483180			10507	1943	7401	7409							0.07418427313859866
GFGARVII	8	Unmodified	_GFGARVII_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	416.755613	831.496673	1.463	0.0006097	-3.5	-0.0014587	-2.0371	-0.00084896	416.7542070398901	62.162	0.71399	62.191	61.897	62.611	0.029575	0.13497	-0.0018295	NaN	9.4706	66	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	541240			10508	1943	7401	7409							0.07418427313859866
GFGARVII	8	Unmodified	_GFGARVII_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	416.755613	831.496673	0.38245	0.00015939	-2.1308	-0.00088801	-1.7483	-0.00072862	416.7546240933376	61.794	0.73304	61.913	61.518	62.251	0.11901	-0.1432	-0.00068817	NaN	9.4706	70	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1137600			10509	1943	7401	7409							0.07418427313859866
GFGARVII	8	Unmodified	_GFGARVII_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	416.755613	831.496673	-0.9744	-0.00040609	-0.68233	-0.00028436	-1.6567	-0.00069045	416.75520482553145	62.015	0.63457	62.03	61.651	62.286	0.015724	-0.02608	0.00051912	NaN	9.4706	59	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	912440			10510	1943	7401	7409							0.07418427313859866
GFGINPVKRR	10	Unmodified	_GFGINPVKRR_					0	0	0			REV__ENST00000327619.9_1_20:45816714-45817023:+|nuORF	REV__ENST00000327619.9_1_20:45816714-45817023:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	572.3407592773438	2	572.340907	1142.66726	0.87335	0.00049985	-1.4784	-0.00084615	-0.60505	-0.0003463	572.3395530255622	101.42	0.82366	101.56	101.29	102.11	0.14352					44	19	3	0	0	0	0.86718	1	10646	10646		27.882	0	1	286080	+		10511	25091	7402	7410	12039	12039					0.10163337965332175
GFGIYPVL	8	Unmodified	_GFGIYPVL_					0	0	0			REV__ENST00000256497.8_1_3:5258688-5258793:+|nuORF	REV__ENST00000256497.8_1_3:5258688-5258793:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.59783935546875	2	433.244547	864.47454	-1.562	-0.00067675	3.7257	0.0016142	2.1637	0.0009374	433.2462808706289	107.38	0.16932	107.52	107.44	107.61	0.13866					5	3	2	0	0	0	0.4196	1	11534	11534		33.493	8.989	1	64823	+		10512	24328	7403	7411	12040	12040					0.03688202845421529
GFGRIGRL	8	Unmodified	_GFGRIGRL_					0	0	0		ENSG00000111640|ENST00000229239|GAPDH;ENST00000396856.5_1_12:6643998-6645957:+|nuORF;ENSG00000105679|ENST00000222286|GAPDHS	ENSG00000111640|ENST00000229239|GAPDH	ENSG00000111640|ENST00000229239|GAPDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2624816894531	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.80706	1	2822	2822		19.36	0.25645	1	21381000			10513	2590	7404	7412	12041	12041					0.07144347919665961
GFHEMAEVIN	10	Unmodified	_GFHEMAEVIN_					0	0	0			REV__ENSG00000236334|ENST00000419275|PPIAL4G	REV__ENSG00000236334|ENST00000419275|PPIAL4G	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.745849609375	2	573.766049	1145.51754	-1.3528	-0.00077621	1.7102	0.00098127	0.35739	0.00020506	573.7684221800913	43.29	0.23917	43.723	43.627	43.867	0.4334					6	5	2	0	0	0	0.37624	1	3917	3917		21.96	0	1	129800	+		10514	23790	7405	7413	12042	12042					-0.04939395159453852
GFHREGNTTED	11	Unmodified	_GFHREGNTTED_					0	0	0		ENSG00000146457|ENST00000621533|WTAP	ENSG00000146457|ENST00000621533|WTAP	ENSG00000146457|ENST00000621533|WTAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.52197265625	3	421.518057	1261.53234	2.3072	0.00097253	4.0155	0.0016926	6.3227	0.0026651	421.5196057482199	31.372	0.62619	31.361	31.093	31.719	-0.010656					32	14	3	0	0	0	0.71394	1	1702	1702		29.245	6.6834	1	102480			10515	4848	7406	7414	12043	12043					-0.08796231757764872
GFIDLMELKLM	11	Unmodified	_GFIDLMELKLM_					0	0	0		nc|ENSG00000115468|Q9BUP0-2|EFHD1;ENSG00000115468|ENST00000264059|EFHD1;ENSG00000142634|ENST00000375980|EFHD2	nc|ENSG00000115468|Q9BUP0-2|EFHD1	nc|ENSG00000115468|Q9BUP0-2|EFHD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2310791015625	3	437.234665	1308.68217	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.67	1	119.64	119.14	120.14	-0.024033								0	0	0	0.56276	1	13255	13255		24.232	0.85391	1				10516	2847	7407	7415	12044	12044					0.04017280936136558
GFIGRRIG	8	Unmodified	_GFIGRRIG_					0	0	0			REV__ENST00000551766.5_1_16:22447080-22448506:-|nuORF	REV__ENST00000551766.5_1_16:22447080-22448506:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2629089355469	2	438.264136	874.51372	-1.2142	-0.00053214	-0.86056	-0.00037715	-2.0748	-0.00090929	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.88915	1	3206	3206		35.201	0	1	4828000	+		10517	28612	7408	7416	12045	12045					0.07144347919654592
GFIGRRIG	8	Unmodified	_GFIGRRIG_					0	0	0			REV__ENST00000551766.5_1_16:22447080-22448506:-|nuORF	REV__ENST00000551766.5_1_16:22447080-22448506:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2629089355469	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.89457	1	3179	3179		37.028	0	1	4268300	+		10518	28612	7408	7416	12046	12046					0.07144347919654592
GFIGRRIG	8	Unmodified	_GFIGRRIG_					0	0	0			REV__ENST00000551766.5_1_16:22447080-22448506:-|nuORF	REV__ENST00000551766.5_1_16:22447080-22448506:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2629089355469	2	438.264136	874.51372	0.037237	1.632E-05	-1.83	-0.00080201	-1.7927	-0.00078569	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.88915	1	2079	2079		35.201	0	1	10667000	+		10519	28612	7408	7416	12047	12047					0.07144347919654592
GFIGRRIG	8	Unmodified	_GFIGRRIG_					0	0	0			REV__ENST00000551766.5_1_16:22447080-22448506:-|nuORF	REV__ENST00000551766.5_1_16:22447080-22448506:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2625732421875	2	438.264136	874.51372	0.27759	0.00012166	-2.5692	-0.001126	-2.2916	-0.0010043	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.86288	1	2858	2858		26.796	0	1	85249000	+		10520	28612	7408	7416	12048	12048					0.07144347919654592
GFIPPPLAPVR	11	Unmodified	_GFIPPPLAPVR_					0	0	0		nc|ENSG00000289604|P0CG41|CTAGE8;ENSG00000271321|ENST00000470691|CTAGE6;ENSG00000271079|ENST00000420911|CTAGE15	nc|ENSG00000289604|P0CG41|CTAGE8	nc|ENSG00000289604|P0CG41|CTAGE8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3541259765625	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.33	1	113.31	112.81	113.81	-0.024811								0	0	0	0.56276	1	12538	12538		20.947	0.95016	1				10521	8976	7409	7417	12049	12049					0.1114287453635825
GFIPPPLAPVR	11	Unmodified	_GFIPPPLAPVR_					0	0	0		nc|ENSG00000289604|P0CG41|CTAGE8;ENSG00000271321|ENST00000470691|CTAGE6;ENSG00000271079|ENST00000420911|CTAGE15	nc|ENSG00000289604|P0CG41|CTAGE8	nc|ENSG00000289604|P0CG41|CTAGE8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.351318359375	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.83	1	117.8	117.3	118.3	-0.02433								0	0	0	0.56276	1	13048	13048		32.812	4.7309	1				10522	8976	7409	7417	12050	12050					0.1114287453635825
GFIPPPLAPVR	11	Unmodified	_GFIPPPLAPVR_					0	0	0		nc|ENSG00000289604|P0CG41|CTAGE8;ENSG00000271321|ENST00000470691|CTAGE6;ENSG00000271079|ENST00000420911|CTAGE15	nc|ENSG00000289604|P0CG41|CTAGE8	nc|ENSG00000289604|P0CG41|CTAGE8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3576049804688	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.18	1	119.15	118.65	119.65	-0.024033								0	0	0	0.56276	1	13206	13206		20.947	1.8434	1				10523	8976	7409	7417	12051	12051					0.1114287453635825
GFIPPPLAPVR	11	Unmodified	_GFIPPPLAPVR_					0	0	0		nc|ENSG00000289604|P0CG41|CTAGE8;ENSG00000271321|ENST00000470691|CTAGE6;ENSG00000271079|ENST00000420911|CTAGE15	nc|ENSG00000289604|P0CG41|CTAGE8	nc|ENSG00000289604|P0CG41|CTAGE8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3469848632812	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.87	1	119.85	119.35	120.35	-0.024033								0	0	0	0.56276	1	13277	13277		19.997	5.8596	1				10524	8976	7409	7417	12052	12052					0.1114287453635825
GFIPPPLAPVR	11	Unmodified	_GFIPPPLAPVR_					0	0	0		nc|ENSG00000289604|P0CG41|CTAGE8;ENSG00000271321|ENST00000470691|CTAGE6;ENSG00000271079|ENST00000420911|CTAGE15	nc|ENSG00000289604|P0CG41|CTAGE8	nc|ENSG00000289604|P0CG41|CTAGE8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3536987304688	2	582.350409	1162.68626	0.88326	0.00051437	4.387	0.0025548	5.2703	0.0030692	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.68378	1	11051	11051		34.173	1.3601	1	125340000			10525	8976	7409	7417	12053	12053					0.1114287453635825
GFIQTATVLAI	11	Unmodified	_GFIQTATVLAI_					0	0	0		ENSG00000148215|ENST00000373680|OR5C1	ENSG00000148215|ENST00000373680|OR5C1	ENSG00000148215|ENST00000373680|OR5C1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3294677734375	2	567.331882	1132.64921	-0.54401	-0.00030863	-2.6363	-0.0014957	-3.1803	-0.0018043	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.69995	1	8809	8809		31.53	5.9558	1	4477200			10526	4939	7410	7418	12054	12054					0.08819158199935373
GFIQTATVLAI	11	Unmodified	_GFIQTATVLAI_					0	0	0		ENSG00000148215|ENST00000373680|OR5C1	ENSG00000148215|ENST00000373680|OR5C1	ENSG00000148215|ENST00000373680|OR5C1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.65746	1	9280	9280		37.812	0	1	18558000			10527	4939	7410	7418	12055	12055					0.08819158199935373
GFISCVGSFIL	11	Unmodified	_GFISCVGSFIL_					0	0	0		ENSG00000129562|ENST00000250498|DAD1	ENSG00000129562|ENST00000250498|DAD1	ENSG00000129562|ENST00000250498|DAD1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	571.803466796875	2	571.79936	1141.58417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.606	1	77.655	77.155	78.155	0.04969								0	0	0	0.56276	1	7606	7606		45.972	16.802	1				10528	3594	7411	7419	12056	12056					0.019038404024740885
GFKDNVYRKR	10	Unmodified	_GFKDNVYRKR_					0	0	0		ENSG00000129167|ENST00000682019|TPH1;nc|ENSG00000129167|P17752-2|TPH1	ENSG00000129167|ENST00000682019|TPH1	ENSG00000129167|ENST00000682019|TPH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.86328125	2	641.854378	1281.6942	7.1265	0.0045742	0.9889	0.00063473	8.1154	0.0052089	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.86218	1	13806	13806		32.812	1.2826	1	98705			10529	3575	7412	7420	12057	12057					0.06462401785825023
GFKGRIVG	8	Unmodified	_GFKGRIVG_					0	0	0			REV__ENST00000559016.1_1_15:49426483-49429634:-|nuORF	REV__ENST00000559016.1_1_15:49426483-49429634:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2532958984375	2	417.253237	832.491922	0.14587	6.0863E-05	-0.35671	-0.00014884	-0.21085	-8.7977E-05	417.25289166109235	35.368	1.357	35.474	35.11	36.467	0.10604					60	43	2	0	0	0	0.82464	1	1874	1874		21.702	1.2205	1	170260	+		10530	28745	7413	7421	12058	12058					0.06897543171089637
GFKKRSARDL	10	Unmodified	_GFKKRSARDL_					0	0	0			REV__ENST00000536240.5_1_12:21652530-21654503:-|nuORF	REV__ENST00000536240.5_1_12:21652530-21654503:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3412475585938	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86272	1	10169	10169		24.519	0	1	17904000	+		10531	28403	7414	7422	12059	12059					0.09147016757151505
GFKPRDLYS	9	Unmodified	_GFKPRDLYS_					0	0	0			REV__ENSG00000254585|ENST00000650528|MAGEL2	REV__ENSG00000254585|ENST00000650528|MAGEL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7891235351562	2	541.785099	1081.55564	0.62478	0.0003385	-0.32404	-0.00017556	0.30074	0.00016294	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.77244	1	5444	5444		32.812	0	1	5802700	+		10532	23892	7415	7423	12060	12060					0.018128588175159166
GFKRSGLVPLS	11	Unmodified	_GFKRSGLVPLS_					0	0	0		ENST00000377474.3_1_13:77458706-77458946:-|nuORF	ENST00000377474.3_1_13:77458706-77458946:-|nuORF	ENST00000377474.3_1_13:77458706-77458946:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	580.8408203125	2	580.842948	1159.67134	-0.77464	-0.00044995	-3.2034	-0.0018607	-3.978	-0.0023106	580.8409079649531	69.999	0.8299	69.999	69.758	70.588	0					106	43	3	0	0	0	0.69995	1	6264	6264		31.53	8.4873	1	7674300			10533	10838	7416	7424	12061	12061					0.09789382668373037
GFKSRIPP	8	Unmodified	_GFKSRIPP_					0	0	0		ENST00000331495.7_1_17:43308016-43309782:+|nuORF	ENST00000331495.7_1_17:43308016-43309782:+|nuORF	ENST00000331495.7_1_17:43308016-43309782:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.2676696777344	2	451.266345	900.518136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.655	1	77.779	77.279	78.279	0.12485								0	0	0	0.30045	1	7297	7297		40.573	1.7665	1				10534	10124	7417	7425	12062	12062					0.06389812342570167
GFLFNLRK	8	Unmodified	_GFLFNLRK_					0	0	0		ENST00000524717.5_1_11:96075436-96075634:-|nuORF	ENST00000524717.5_1_11:96075436-96075634:-|nuORF	ENST00000524717.5_1_11:96075436-96075634:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.795654296875	2	497.795269	993.575986	-0.23858	-0.00011877	1.4256	0.00070966	1.187	0.00059089	497.79577554464987	49.055	0.99467	48.961	48.599	49.594	-0.093178					54	23	3	0	0	0	0.85277	1	3794	3794		25.45	2.4135	1	401360			10535	13223	7418	7426	12063	12063					0.0789407426799471
GFLGPLVAV	9	Unmodified	_GFLGPLVAV_					0	0	0		ENSG00000134830|ENST00000595464|C5AR2	ENSG00000134830|ENST00000595464|C5AR2	ENSG00000134830|ENST00000595464|C5AR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2676696777344	2	436.765646	871.516739	0.46701	0.00020397	-4.4316	-0.0019356	-3.9646	-0.0017316	436.7635183439704	26.23	1.3576	26.275	25.815	27.173	0.045509					57	40	2	0	0	0	0.78292	1	1058	1058		29.842	0	1	139010			10536	3963	7419	7427	12064	12064					0.07584178253796381
GFLGRLGR	8	Unmodified	_GFLGRLGR_					0	0	0			REV__ENST00000331569.5_1_8:37557227-37557494:+|nuORF	REV__ENST00000331569.5_1_8:37557227-37557494:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2634582519531	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.884	1	3423	3423		33.516	6.7195	1	4268300	+		10537	25129	7420	7428	12065	12065					0.07144347919643224
GFLKHVNKK	9	Unmodified	_GFLKHVNKK_					0	0	0		ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.3258666992188	2	535.827101	1069.63965	0.41934	0.00022469	-4.4176	-0.002367	-3.9982	-0.0021424	536.3275859693925	54.453	2.0946	54.535	53.354	55.449	0.081524					79	55	2	0	0	0	0.78058	1	4523	4523		30.504	7.4612	1	267830			10538	8665	7421	7429	12066	12066					0.10761434705068496
GFLKHVNKK	9	Unmodified	_GFLKHVNKK_					0	0	0		ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	535.827101	1069.63965	0.14384	7.7076E-05	-4.6559	-0.0024947	-4.512	-0.0024177	536.3284348966018	54.526	1.4768	54.553	53.517	54.994	0.027142	-0.0038689	-0.00057394	NaN	30.504	59	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	177360			10539	8665	7421	7429							0.10761434705068496
GFLKHVNKK	9	Unmodified	_GFLKHVNKK_					0	0	0		ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	535.827101	1069.63965	-0.051639	-2.7669E-05	-4.0935	-0.0021934	-4.1452	-0.0022211	536.3279154555668	54.587	1.7727	54.643	53.314	55.087	0.055611	0.085671	2.8694E-05	NaN	30.504	85	59	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	517510			10540	8665	7421	7429							0.10761434705068496
GFLKHVNKK	9	Unmodified	_GFLKHVNKK_					0	0	0		ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	535.827101	1069.63965	-0.30947	-0.00016582	-3.6953	-0.00198	-4.0048	-0.0021459	536.3280103962398	54.548	2.7612	54.498	53.289	56.05	-0.049271	-0.059075	0.00045548	NaN	30.504	114	83	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	544920			10541	8665	7421	7429							0.10761434705068496
GFLLGWRRR	9	Unmodified	_GFLLGWRRR_					0	0	0		ENST00000238651.9_1_14:74036101-74036146:+|nuORF	ENST00000238651.9_1_14:74036101-74036146:+|nuORF	ENST00000238651.9_1_14:74036101-74036146:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	580.8394775390625	2	580.843616	1159.67268	-0.77464	-0.00044995	-4.3546	-0.0025294	-5.1293	-0.0029793	580.8409079649531	69.999	0.8299	69.999	69.758	70.588	0					106	43	3	0	0	0	0.7932	1	6228	6228		26.796	1.3459	1	7674300			10542	9242	7422	7430	12067	12067					0.09923061547783618
GFLLPLLAM	9	Unmodified	_GFLLPLLAM_					0	0	0		ENSG00000144648|ENST00000422265|ACKR2	ENSG00000144648|ENST00000422265|ACKR2	ENSG00000144648|ENST00000422265|ACKR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7903137207031	2	487.790807	973.56706	-1.4525	-0.00070854	0.77341	0.00037726	-0.67914	-0.00033128	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.72098	1	7893	7893		39.021	5.5285	1	503530			10543	4723	7423	7431	12068	12068					0.07921964587308139
GFLPKRFRVSF	11	Unmodified	_GFLPKRFRVSF_					0	0	0			REV__nc|ENSG00000157077|O95405-2|ZFYVE9	REV__nc|ENSG00000157077|O95405-2|ZFYVE9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9322509765625	3	451.931185	1352.77173	2.3813	0.0010762	0.97011	0.00043843	3.3514	0.0015146	451.9315121357165	99.085	2.2621	99.03	97.603	99.866	-0.054817					133	52	3	0	0	0	0.76579	1	10663	10663		18.531	0.19939	1	545200	+		10544	20524	7424	7432	12069	12069					0.10945039722014371
GFLPKRFRVSF	11	Unmodified	_GFLPKRFRVSF_					0	0	0			REV__nc|ENSG00000157077|O95405-2|ZFYVE9	REV__nc|ENSG00000157077|O95405-2|ZFYVE9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.2673034667969	3	451.931185	1352.77173	0.75363	0.00034059	2.5541	0.0011543	3.3077	0.0014949	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.74022	2	10433	10433;10466		24.232	3.3947	1	952120	+		10545	20524	7424	7432	12070;12071	12070					0.10945039722014371
GFLPRAPSL	9	Unmodified	_GFLPRAPSL_					0	0	0			REV__ENSG00000170604|ENST00000302165|IRF2BP1	REV__ENSG00000170604|ENST00000302165|IRF2BP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2778015136719	2	479.279452	956.544351	-0.95082	-0.00045571	-3.0433	-0.0014586	-3.9941	-0.0019143	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.76764	1	10177	10177		34.173	0.65696	1	6350300	+		10546	21672	7425	7433	12072	12072					0.0643408151404401
GFLPSKVKH	9	Unmodified	_GFLPSKVKH_					0	0	0		ENST00000339570.9_1_12:125262502-125262823:-|nuORF	ENST00000339570.9_1_12:125262502-125262823:-|nuORF	ENST00000339570.9_1_12:125262502-125262823:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8013610839844	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.889	1	50.889	50.389	51.389	0								0	0	0	0.31437	1	4091	4091		25.574	0	1				10547	10224	7426	7434	12073	12073					0.08122056922422871
GFLPVLVR	8	Unmodified	_GFLPVLVR_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7860412597656	2	450.786913	899.559273	2.7552	0.001242	-3.2275	-0.0014549	-0.47228	-0.0002129	450.7851135648896	110.04	1.5878	110.02	109.66	111.25	-0.027641					85	55	2	0	0	0	0.86791	1	12175	12175		28.254	6.5519	1	241040			10548	1560	7427	7435	12074	12074					0.10547573382029896
GFLRSLPPPPL	11	Unmodified	_GFLRSLPPPPL_					0	0	0		ENST00000316586.8_1_2:242447465-242448045:-|nuORF	ENST00000316586.8_1_2:242447465-242448045:-|nuORF	ENST00000316586.8_1_2:242447465-242448045:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8562622070312	2	597.355691	1192.69683	0.84117	0.00050248	-0.70528	-0.0004213	0.1359	8.1178E-05	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.66929	2	9525	9525;9820		36.447	4.7437	1	18777000			10549	9987	7428	7436	12075;12076	12075					0.10818857190793096
GFLRVVRFV	9	Unmodified	_GFLRVVRFV_					0	0	0		nc|ENSG00000116396|Q03721-2|KCNC4;ENST00000489935.1_1_1:110754121-110766653:+|nuORF;ENSG00000116396|ENST00000438661|KCNC4;nc|ENSG00000116396|Q03721|KCNC4;nc|ENSG00000129159|P48547|KCNC1;ENSG00000129159|ENST00000265969|KCNC1;ENSG00000131398|ENST00000477616|KCNC3;nc|ENSG00000166006|Q96PR1-4|KCNC2;nc|ENSG00000166006|Q96PR1-5|KCNC2;nc|ENSG00000166006|Q96PR1-3|KCNC2;nc|ENSG00000166006|Q96PR1-6|KCNC2;nc|ENSG00000166006|Q96PR1-2|KCNC2;ENSG00000166006|ENST00000549446|KCNC2	nc|ENSG00000116396|Q03721-2|KCNC4;nc|ENSG00000166006|Q96PR1-4|KCNC2	nc|ENSG00000116396|Q03721-2|KCNC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8403930664062	2	546.837468	1091.66038	-0.41161	-0.00022509	4.3874	0.0023992	3.9758	0.0021741	546.8400747085221	101.16	3.89	101.19	100.52	104.41	0.031036					283	93	6	0	0	0	0.7932	1	11043	11043		19.36	1.0356	1	40007000			10550	2919;6148	7429	7437	12077	12077					0.11822025084757115
GFLRVVRFV	9	Unmodified	_GFLRVVRFV_					0	0	0		nc|ENSG00000116396|Q03721-2|KCNC4;ENST00000489935.1_1_1:110754121-110766653:+|nuORF;ENSG00000116396|ENST00000438661|KCNC4;nc|ENSG00000116396|Q03721|KCNC4;nc|ENSG00000129159|P48547|KCNC1;ENSG00000129159|ENST00000265969|KCNC1;ENSG00000131398|ENST00000477616|KCNC3;nc|ENSG00000166006|Q96PR1-4|KCNC2;nc|ENSG00000166006|Q96PR1-5|KCNC2;nc|ENSG00000166006|Q96PR1-3|KCNC2;nc|ENSG00000166006|Q96PR1-6|KCNC2;nc|ENSG00000166006|Q96PR1-2|KCNC2;ENSG00000166006|ENST00000549446|KCNC2	nc|ENSG00000116396|Q03721-2|KCNC4;nc|ENSG00000166006|Q96PR1-4|KCNC2	nc|ENSG00000116396|Q03721-2|KCNC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.841064453125	2	546.837468	1091.66038	2.1573	0.0011797	2.6166	0.0014309	4.774	0.0026106	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.77546	1	12211	12211		31.955	0.42505	1	10074000			10551	2919;6148	7429	7437	12078	12078					0.11822025084757115
GFLSKPLI	8	Unmodified	_GFLSKPLI_					0	0	0		nc|ENSG00000158816|Q5TIE3-5|VWA5B1;ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1	nc|ENSG00000158816|Q5TIE3-5|VWA5B1	nc|ENSG00000158816|Q5TIE3-5|VWA5B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7711486816406	2	437.773471	873.53239	-0.99724	-0.00043656	-4.0891	-0.0017901	-5.0864	-0.0022267	437.77179407937126	38.831	0.76415	39.173	38.896	39.661	0.34187					66	17	5	0	0	0	0.884	1	3205	3205		33.516	1.5607	1	15326000			10552	5498	7430	7438	12079	12079					0.09056464770844741
GFLTKGATN	9	Unmodified	_GFLTKGATN_					0	0	0			REV__ENSG00000089597|ENST00000356638|GANAB	REV__ENSG00000089597|ENST00000356638|GANAB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.74481201171875	2	454.745442	907.476331	-0.13391	-6.0896E-05	-0.83302	-0.00037881	-0.96693	-0.00043971	454.7449043410658	103.95	1.6099	103.94	103.26	104.87	-0.0035706					76	38	3	0	0	0	0.77696	1	11209	11209		31.53	5.9558	1	761390	+		10553	16971	7431	7439	12080	12080					0.01889211863374385
GFLVKVVRRS	10	Unmodified	_GFLVKVVRRS_					0	0	0			REV__ENSG00000204021|ENST00000404190|LIPK	REV__ENSG00000204021|ENST00000404190|LIPK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8662719726562	2	580.866757	1159.71896	-1.099	-0.0006384	-0.0099015	-5.7514E-06	-1.1089	-0.00064415	580.866642906103	78.68	1.2707	79.091	78.551	79.822	0.4106					73	29	3	0	0	0	0.86763	1	8972	8972		26.693	1.1189	1	1935400	+		10554	23452	7432	7440	12081	12081					0.14549081659242802
GFLVNLITEK	10	Unmodified	_GFLVNLITEK_					0	0	0			REV__ENST00000216014.8_1_22:38878537-38878720:+|nuORF	REV__ENST00000216014.8_1_22:38878537-38878720:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.330078125	2	567.331882	1132.64921	-1.2007	-0.00068122	-1.9524	-0.0011076	-3.1531	-0.0017889	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.91289	1	9407	9407		7.1934	0	1	5763000	+		10555	24120	7433	7441	12082	12082					0.0881915819995811
GFLVVPRKFG	10	Unmodified	_GFLVVPRKFG_					0	0	0			REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3403930664062	2	560.337301	1118.66005	3.1377	0.0017581	1.8932	0.0010608	5.0309	0.002819	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.86201	2	11307	11307;11404		29.15	2.3535	1	83033000	+		10556	18341	7434	7442	12083;12084	12083					0.10546605364879724
GFLVVPRKFG	10	Unmodified	_GFLVVPRKFG_					0	0	0			REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3403930664062	2	560.337301	1118.66005	0.86177	0.00048288	4.2142	0.0023614	5.076	0.0028442	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.86589	1	11008	11008		29.15	1.0681	1	126390000	+		10557	18341	7434	7442	12085	12085					0.10546605364879724
GFLVVPRKFG	10	Unmodified	_GFLVVPRKFG_					0	0	0			REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3401489257812	2	560.337301	1118.66005	2.2618	0.0012674	2.9526	0.0016544	5.2144	0.0029218	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.86452	1	12415	12415		30.504	1.3541	1	14759000	+		10558	18341	7434	7442	12086	12086					0.10546605364879724
GFLVVPRKFG	10	Unmodified	_GFLVVPRKFG_					0	0	0			REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.341552734375	2	560.337301	1118.66005	2.9009	0.0016255	2.2912	0.0012838	5.1921	0.0029093	560.3384791854071	101.98	1.2376	102.3	101.86	103.1	0.32511					132	30	6	0	0	0	0.86201	1	12518	12518		24.203	4.206	1	15824000	+		10559	18341	7434	7442	12087	12087					0.10546605364879724
GFLVVPRKFG	10	Unmodified	_GFLVVPRKFG_					0	0	0			REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3404541015625	2	560.337301	1118.66005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.85	1	104.12	103.62	104.62	0.26524								0	0	0	0.45132	1	12678	12678		23.042	0	1		+		10560	18341	7434	7442	12088	12088					0.10546605364879724
GFMTIIFV	8	Unmodified	_GFMTIIFV_					0	0	0			REV__nc|ENSG00000164287|Q86Y33-4|CDC20B	REV__nc|ENSG00000164287|Q86Y33-4|CDC20B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2527770996094	2	464.254057	926.493561	-1.467	-0.00068104	1.2482	0.00057946	-0.21881	-0.00010158	464.25450213652135	80.516	0.77847	80.621	80.13	80.909	0.10526					59	23	4	0	0	0	0.86288	1	7654	7654		26.796	1.3459	1	320700	+		10561	29990	7435	7443	12089	12089					0.02737416144816507
GFNLGRYWTK	10	Unmodified	_GFNLGRYWTK_					0	0	0		ENSG00000163521|ENST00000295759|GLB1L;nc|ENSG00000163521|Q6UWU2-2|GLB1L	ENSG00000163521|ENST00000295759|GLB1L	ENSG00000163521|ENST00000295759|GLB1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.59130859375	3	414.552374	1240.63529	0.21749	9.0161E-05	4.2939	0.00178	4.5113	0.0018702	414.8884509067544	18.289	0.13628	17.668	17.585	17.722	-0.62141					4	2	2	0	0	0	0.37624	1	371	371		24.232	9.5381	1	13598			10562	5815	7436	7444	12090	12090					0.024599254914846824
GFNLTILSD	9	Unmodified	_GFNLTILSD_					0	0	0		ENST00000591983.5_1_17:76133663-76133735:+|nuORF	ENST00000591983.5_1_17:76133663-76133735:+|nuORF	ENST00000591983.5_1_17:76133663-76133735:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.2592468261719	2	490.258382	978.502212	3.5979	0.0017639	-4.4703	-0.0021916	-0.8724	-0.0004277	490.2561771879544	104.75	1.7929	104.97	104.29	106.09	0.22681					67	43	2	0	0	0	0.7932	1	12810	12810		26.693	1.2427	1	267130			10563	14282	7437	7445	12091	12091					0.012100613150096251
GFNSEFMPVI	10	Unmodified	_GFNSEFMPVI_					0	0	0		nc|nan|Q9H0W9-3|C11orf54;nc|nan|Q9H0W9-2|C11orf54;ENSG00000182919|ENST00000354421|C11orf54	nc|nan|Q9H0W9-3|C11orf54	nc|nan|Q9H0W9-3|C11orf54	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.272705078125	2	570.773342	1139.53213	-1.0878	-0.0006209	-2.9447	-0.0016808	-4.0325	-0.0023017	570.7715868891898	56.291	0.56245	56.28	55.771	56.334	-0.010136					29	19	2	0	0	0	0.85981	1	5014	5014		35.152	7.2698	1	395810			10564	7482	7438	7446	12092	12092					-0.032053230113206155
GFPAPEPE	8	Unmodified	_GFPAPEPE_					0	0	0			REV__ENSG00000198944|ENST00000378693|SOWAHA	REV__ENSG00000198944|ENST00000378693|SOWAHA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.2539978027344	2	422.197793	842.381034	2.7032	0.0011413	-1.5167	-0.00064035	1.1865	0.00050094	422.1975498101224	85.454	2.1255	85.512	84.066	86.191	0.057899					89	48	3	0	0	0	0.4196	1	8504	8504		19.36	5.9059	1	197020	+		10565	23424	7439	7447	12093	12093					-0.04646141327668829
GFPDKQPRKK	10	Unmodified	_GFPDKQPRKK_					0	0	0		ENSG00000196154|ENST00000368716|S100A4	ENSG00000196154|ENST00000368716|S100A4	ENSG00000196154|ENST00000368716|S100A4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.2450866699219	3	400.899773	1199.67749	-0.17165	-6.8815E-05	0.026827	1.0755E-05	-0.14483	-5.806E-05	400.9002633224851	21.135	0.37957	20.507	20.296	20.676	-0.62834					11	10	2	0	0	0	0.37624	1	735	735		29.551	0	1	12425			10566	8018	7440	7448	12094	12094					0.08563900899889632
GFPDLHGKIQ	10	Unmodified	_GFPDLHGKIQ_					0	0	0		nc|ENSG00000188107|Q5T1H1|EYS;ENSG00000188107|ENST00000503581|EYS	nc|ENSG00000188107|Q5T1H1|EYS	nc|ENSG00000188107|Q5T1H1|EYS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	556.2970581054688	2	556.298373	1110.58219	0.24575	0.00013671	-0.71349	-0.00039691	-0.46774	-0.00026021	556.2977452704006	75.861	0.66244	75.815	75.554	76.217	-0.045982					33	16	3	0	0	0	0.73395	1	7483	7483		42.864	10.909	1	159240			10567	15168	7441	7449	12095	12095					0.03132547708855782
GFPIQPVR	8	Unmodified	_GFPIQPVR_					0	0	0			REV__nc|ENSG00000116962|P14543-2|NID1	REV__nc|ENSG00000116962|P14543-2|NID1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2633972167969	2	457.266345	912.518136	-1.2409	-0.00056743	-3.1044	-0.0014196	-4.3454	-0.001987	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.91005	1	7974	7974		42.474	8.9589	1	2957200	+		10568	18235	7442	7450	12096	12096					0.05837812342565485
GFPIQPVR	8	Unmodified	_GFPIQPVR_					0	0	0			REV__nc|ENSG00000116962|P14543-2|NID1	REV__nc|ENSG00000116962|P14543-2|NID1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26361083984375	2	457.266345	912.518136	-1.1676	-0.0005339	-3.1744	-0.0014516	-4.342	-0.0019855	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.86288	1	7674	7674		26.796	1.3459	1	1329900	+		10569	18235	7442	7450	12097	12097					0.05837812342565485
GFPIQPVR	8	Unmodified	_GFPIQPVR_					0	0	0			REV__nc|ENSG00000116962|P14543-2|NID1	REV__nc|ENSG00000116962|P14543-2|NID1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2640686035156	2	457.266345	912.518136	-1.1625	-0.00053158	-3.3651	-0.0015388	-4.5277	-0.0020703	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.86288	3	7838	7838;8135;8173		33.516	1.3459	1	4732500	+		10570	18235	7442	7450	12098;12099;12100	12098					0.05837812342565485
GFPIQPVR	8	Unmodified	_GFPIQPVR_					0	0	0			REV__nc|ENSG00000116962|P14543-2|NID1	REV__nc|ENSG00000116962|P14543-2|NID1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.263916015625	2	457.266345	912.518136	-1.5615	-0.00071403	-2.9129	-0.001332	-4.4744	-0.002046	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.86288	3	8075	8075;8088;8212		26.796	2.5934	1	4061400	+		10571	18235	7442	7450	12101;12102;12103	12101					0.05837812342565485
GFPIQPVR	8	Unmodified	_GFPIQPVR_					0	0	0			REV__nc|ENSG00000116962|P14543-2|NID1	REV__nc|ENSG00000116962|P14543-2|NID1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2635803222656	2	457.266345	912.518136	-0.94036	-0.00042999	-3.4538	-0.0015793	-4.3941	-0.0020093	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.86288	1	9650	9650		26.796	1.3459	1	3505500	+		10572	18235	7442	7450	12104	12104					0.05837812342565485
GFPKYGAYVP	10	Unmodified	_GFPKYGAYVP_					0	0	0		ENSG00000168907|ENST00000397272|PLA2G4F;nc|ENSG00000168907|Q68DD2-3|PLA2G4F	ENSG00000168907|ENST00000397272|PLA2G4F	ENSG00000168907|ENST00000397272|PLA2G4F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.78662109375	2	549.784567	1097.55458	3.438	0.0018902	0.97442	0.00053572	4.4125	0.0024259	549.7848785065544	110.4	0.71516	110.37	110.19	110.9	-0.027641					31	17	3	0	0	0	0.86452	1	12221	12221		30.504	3.7075	1	204800			10573	6448	7443	7451	12105	12105					0.009706444486027976
GFPLATQLNV	10	Unmodified	_GFPLATQLNV_					0	0	0		ENSG00000187533|ENST00000344526|PRR27;chr4:70152137-70154365|21|269.62|0.21|10.29|+|ENST00000502294|PRR27,PRR27	ENSG00000187533|ENST00000344526|PRR27	ENSG00000187533|ENST00000344526|PRR27	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.29345703125	2	530.295299	1058.57605	-1.5163	-0.00080409	-2.0724	-0.001099	-3.5887	-0.0019031	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.77314	1	9060	9060		40.778	6.6056	1	1686700			10574	428	7444	7452	12106	12106					0.049100294773325004
GFPLRAPSI	9	Unmodified	_GFPLRAPSI_					0	0	0			REV__ENST00000315150.9_1_3:128808380-128808617:-|nuORF	REV__ENST00000315150.9_1_3:128808380-128808617:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2774658203125	2	479.279452	956.544351	-1.0919	-0.00052333	-3.0273	-0.0014509	-4.1192	-0.0019742	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.74721	1	7890	7890		37.159	0	1	4644500	+		10575	24941	7445	7453	12107	12107					0.0643408151404401
GFPLRLLN	8	Unmodified	_GFPLRLLN_					0	0	0			REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2801818847656	2	465.281995	928.549437	-1.1036	-0.00051349	-3.1369	-0.0014595	-4.2405	-0.001973	465.28037254514356	89.207	2.109	89.207	88.71	90.819	0					110	48	4	0	0	0	0.86791	2	8612	8612;8624		35.201	3.6709	1	1091500	+		10576	20694	7446	7454	12108;12109	12108					0.08230385376657523
GFPLRLLN	8	Unmodified	_GFPLRLLN_					0	0	0			REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.27996826171875	2	465.281995	928.549437	-0.11898	-5.5362E-05	-4.1245	-0.001919	-4.2435	-0.0019744	465.2799248826243	89.079	2.3276	89.147	88.595	90.922	0.068161					120	54	4	0	0	0	0.86791	1	9066	9066		28.254	4.0515	1	1620100	+		10577	20694	7446	7454	12110	12110					0.08230385376657523
GFPLRLLN	8	Unmodified	_GFPLRLLN_					0	0	0			REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.27972412109375	2	465.281995	928.549437	-1.0328	-0.00048052	-3.2986	-0.0015348	-4.3314	-0.0020153	465.28033562391573	88.755	1.4343	88.962	88.47	89.905	0.20731					94	33	4	0	0	0	0.86288	3	8826	8826;8839;8862		28.254	3.7503	1	1094400	+		10578	20694	7446	7454	12111;12112;12113	12111					0.08230385376657523
GFPLRLLN	8	Unmodified	_GFPLRLLN_					0	0	0			REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.2801513671875	2	465.281995	928.549437	-1.728	-0.00080402	-2.528	-0.0011762	-4.2561	-0.0019803	465.28067924301723	88.748	2.0508	88.921	88.498	90.549	0.17234					103	47	4	0	0	0	0.86791	1	8796	8796		28.254	2.8041	1	1028800	+		10579	20694	7446	7454	12114	12114					0.08230385376657523
GFPLRLLN	8	Unmodified	_GFPLRLLN_					0	0	0			REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.27978515625	2	465.281995	928.549437	-1.4902	-0.00069338	-2.801	-0.0013033	-4.2912	-0.0019966	465.28061982816973	88.721	1.2176	89.191	88.797	90.015	0.47068					80	29	4	0	0	0	0.91005	1	10530	10530		42.474	10.945	1	1086000	+		10580	20694	7446	7454	12115	12115					0.08230385376657523
GFPNNINRTT	10	Unmodified	_GFPNNINRTT_					0	0	0			REV__ENST00000597173.5_1_2:145780830-145909219:+|nuORF	REV__ENST00000597173.5_1_2:145780830-145909219:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.2882080078125	2	567.288537	1132.56252	2.9384	0.0016669	-3.8268	-0.0021709	-0.88841	-0.00050399	567.2861905319314	109.92	0.50407	109.89	109.77	110.28	-0.027641					36	21	2	0	0	0	0.85934	1	12160	12160		35.618	0.46626	1	578260	+		10581	29262	7447	7455	12116	12116					0.001541716980682395
GFPQRVVK	8	Unmodified	_GFPQRVVK_					0	0	0		ENSG00000137675|ENST00000260229|MMP27	ENSG00000137675|ENST00000260229|MMP27	ENSG00000137675|ENST00000260229|MMP27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7777099609375	2	465.779619	929.544686	-0.25577	-0.00011913	-4.1501	-0.001933	-4.4059	-0.0020522	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.88915	1	7949	7949		35.201	9.7505	1	451640			10582	4223	7448	7456	12117	12117					0.07709501233898663
GFQQTSEH	8	Unmodified	_GFQQTSEH_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C;ENSG00000198722|ENST00000635942|UNC13B;nc|ENSG00000198722|O14795|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B;chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A;chr19:17618962-17624829|52|21.02|0.18|6.91|-|ENST00000552293|UNC13A,UNC13A;ENSG00000130477|ENST00000519716|UNC13A	ENSG00000137766|ENST00000260323|UNC13C;ENSG00000198722|ENST00000635942|UNC13B;chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	ENSG00000198722|ENST00000635942|UNC13B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.233154296875	2	467.206681	932.398809	-0.4344	-0.00020295	1.35	0.00063075	0.91563	0.00042779	467.207904462689	66.777	0.10415	67.327	67.246	67.351	0.55071					5	3	2	0	0	0	0.4196	1	7319	7319		33.516	18.651	1	136590			10583	8315;4233;266	7449	7457	12118	12118					-0.07009426072818314
GFRIYHKP	8	Unmodified	_GFRIYHKP_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.25030517578125	2	509.285069	1016.55558	-0.63184	-0.00032179	1.0211	0.00052003	0.38925	0.00019824	509.7873565691181	46.324	0.24237	46.795	46.654	46.897	0.47139					8	5	2	0	0	0	0.4196	1	4360	4360		25.45	0	1	210390	+		10584	21464	7450	7458	12119	12119					0.04796903608178127
GFRKKIKR	8	Unmodified	_GFRKKIKR_					0	0	0		nc|ENSG00000090615|Q08378-2|GOLGA3;ENSG00000090615|ENST00000450791|GOLGA3	nc|ENSG00000090615|Q08378-2|GOLGA3	nc|ENSG00000090615|Q08378-2|GOLGA3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3135375976562	2	516.843085	1031.67162	-0.2538	-0.00013118	-0.51545	-0.00026641	-0.76926	-0.00039759	516.8427566433589	98.918	0.49405	99.14	98.833	99.327	0.22263					16	11	2	0	0	0	0.4196	1	10240	10240		20.482	16.166	1	300520			10585	1652	7451	7459	12120	12120					0.1570484717888121
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2633361816406	2	438.264136	874.51372	-1.9277	-0.00084486	0.24503	0.00010739	-1.6827	-0.00073747	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.81548	4	2313	2222;2313;2335;2408		33.516	6.7195	1	3507500			10586	5333;15007	7452	7460	12121;12122;12123;12124	12122					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26336669921875	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.86288	1	2864	2864		26.796	0	1	3384400			10587	5333;15007	7452	7460	12125	12125					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26336669921875	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.86288	3	2601	2601;2647;2687		26.796	1.3459	1	3673500			10588	5333;15007	7452	7460	12126;12127;12128	12126					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26287841796875	2	438.264136	874.51372	-1.2142	-0.00053214	-0.86056	-0.00037715	-2.0748	-0.00090929	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.86791	2	3359	3310;3359		35.201	3.2459	1	4828000			10589	5333;15007	7452	7460	12129;12130	12130					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26348876953125	2	438.264136	874.51372	-0.25936	-0.00011367	-1.4504	-0.00063564	-1.7097	-0.00074931	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.81548	3	2784	2689;2737;2784		40.573	7.057	1	2361100			10590	5333;15007	7452	7460	12131;12132;12133	12133					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26318359375	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.81548	2	3309	3309;3381		20.482	2.2197	1	4268300			10591	5333;15007	7452	7460	12134;12135	12134					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2622985839844	2	438.264136	874.51372	-1.5833	-0.00069392	-0.15448	-6.7702E-05	-1.7378	-0.00076162	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.884	2	2142	2132;2142		42.474	7.2737	1	11160000			10592	5333;15007	7452	7460	12136;12137	12137					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2626647949219	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.81548	2	2911	2831;2911		26.796	6.3143	1	22924000			10593	5333;15007	7452	7460	12138;12139	12139					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.262451171875	2	438.264136	874.51372	0.15263	6.689E-05	-1.9074	-0.00083592	-1.7547	-0.00076903	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.81548	1	2131	2131		20.482	2.1574	1	11370000			10594	5333;15007	7452	7460	12140	12140					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2632141113281	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.81548	1	2681	2681		20.482	1.1219	1	22029000			10595	5333;15007	7452	7460	12141	12141					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2627258300781	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.81548	1	2789	2789		20.482	2.1574	1	21381000			10596	5333;15007	7452	7460	12142	12142					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2626037597656	2	438.264136	874.51372	-1.3298	-0.00058278	-0.065792	-2.8834E-05	-1.3955	-0.00061162	438.2640159596406	58.026	1.8731	58.42	57.697	59.57	0.39407					78	45	2	0	0	0	0.86288	1	6046	6046		26.796	1.3459	1	1391400			10597	5333;15007	7452	7460	12143	12143					0.07144347919654592
GFRLGRLG	8	Unmodified	_GFRLGRLG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.26348876953125	2	438.264136	874.51372	0.60068	0.00026326	-1.8619	-0.00081599	-1.2612	-0.00055273	438.263210874223	57.843	1.7031	58.396	57.682	59.385	0.55323					87	41	3	0	0	0	0.81548	1	6069	6069		20.482	2.1574	1	1743700			10598	5333;15007	7452	7460	12144	12144					0.07144347919654592
GFRLKGPG	8	Unmodified	_GFRLKGPG_					0	0	0			REV__ENST00000407418.7_1_22:39259799-39260117:-|nuORF	REV__ENST00000407418.7_1_22:39259799-39260117:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7364196777344	2	416.245412	830.476272	1.2704	0.0005288	-0.52312	-0.00021775	0.74729	0.00031106	416.24554968042656	34.697	0.48437	35.079	34.689	35.173	0.3812					15	11	2	0	0	0	0.4196	1	2615	2615		19.36	0	1	232700	+		10599	26316	7453	7461	12145	12145					0.05425256654041277
GFRLRGAV	8	Unmodified	_GFRLRGAV_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26373291015625	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.81548	1	2698	2698		20.482	0	1	3673500	+		10600	17579	7454	7462	12146	12146					0.07144347919643224
GFRLRGAV	8	Unmodified	_GFRLRGAV_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2627868652344	2	438.264136	874.51372	-0.25936	-0.00011367	-1.4504	-0.00063564	-1.7097	-0.00074931	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.87276	1	2845	2845		29.842	0	1	2361100	+		10601	17579	7454	7462	12147	12147					0.07144347919643224
GFRLRGAV	8	Unmodified	_GFRLRGAV_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.263427734375	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.81548	1	2897	2897		20.482	0	1	21381000	+		10602	17579	7454	7462	12148	12148					0.07144347919643224
GFSCPLTT	8	Unmodified	_GFSCPLTT_					0	0	0			REV__ENST00000520638.1_2_5:158603742-158603853:-|nuORF	REV__ENST00000520638.1_2_5:158603742-158603853:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.1942443847656	2	413.194196	824.37384	-1.6019	-0.00066191	0.347	0.00014338	-1.2549	-0.00051853	413.19424248280797	78.75	3.0447	78.844	78.417	81.462	0.0942					181	92	2	0	0	0	0.884	1	7454	7454		33.516	0	1	856750	+		10603	28106	7455	7463	12149	12149					-0.04537197199761067
GFSDKIKVIN	10	Unmodified	_GFSDKIKVIN_					0	0	0		ENST00000565356.5_1_16:68349816-68386396:+|nuORF;nc|ENSG00000132600|Q9NVM4-4|PRMT7;nc|ENSG00000132600|Q9NVM4-3|PRMT7;ENSG00000132600|ENST00000441236|PRMT7	ENST00000565356.5_1_16:68349816-68386396:+|nuORF	ENST00000565356.5_1_16:68349816-68386396:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8200073242188	2	560.821681	1119.62881	-0.54677	-0.00030664	-2.8297	-0.001587	-3.3765	-0.0018936	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.86471	1	9262	9262		30.318	5.7985	1	408930			10604	3808	7456	7464	12150	12150					0.07377987540144204
GFSIISQDL	9	Unmodified	_GFSIISQDL_					0	0	0			REV__ENSG00000144554|ENST00000675286|FANCD2	REV__ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	490.2582702636719	2	490.258382	978.502212	-0.76861	-0.00037682	0.064733	3.1736E-05	-0.70387	-0.00034508	490.2582311851216	107.58	0.88774	107.58	106.84	107.73	0					59	20	4	0	0	0	0.77244	1	11164	11164		32.812	1.2826	1	787300	+		10605	19898	7457	7465	12151	12151					0.012100613149868877
GFSPFLLF	8	Unmodified	_GFSPFLLF_					0	0	0		ENST00000361972.8_1_10:7203714-7204119:-|nuORF	ENST00000361972.8_1_10:7203714-7204119:-|nuORF	ENST00000361972.8_1_10:7203714-7204119:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25384521484375	2	464.252372	926.49019	0.61869	0.00028723	3.0373	0.0014101	3.656	0.0016973	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.89457	1	8121	8121		37.028	0	1	1482000			10606	10498	7458	7466	12152	12152					0.02400489362469216
GFSRLNRR	8	Unmodified	_GFSRLNRR_					0	0	0		nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;ENSG00000154529|ENST00000377561|CNTNAP3B;ENST00000448922.1_9:39768370-39796245:-|nuORF;ENST00000377653.2_1_9:39174468-39266986:-|nuORF;ENSG00000283378|ENST00000636699|CNTNAP3C;ENSG00000106714|ENST00000297668|CNTNAP3;nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	nc|ENSG00000283378|Q9BZ76-2|CNTNAP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.7921447753906	2	503.288674	1004.5628	1.7384	0.00087494	4.0842	0.0020555	5.8226	0.0029305	503.29066537682445	109.62	1.4439	109.69	109.43	110.88	0.067932					122	60	3	0	0	0	0.91977	1	13299	13299		45.952	1.8352	1	1719700			10607	5283;15321	7459	7467	12153	12153					0.060696362085991495
GFSYVPSPK	9	Unmodified	_GFSYVPSPK_					0	0	0			REV__nc|ENSG00000152683|Q6NXT4-4|SLC30A6	REV__nc|ENSG00000152683|Q6NXT4-4|SLC30A6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	490.2674865722656	2	491.255643	980.496732	-1.2611	-0.00061954	1.6983	0.00083428	0.43712	0.00021474	491.2562984858641	84.34	1.6547	84.399	83.629	85.284	0.059258					58	37	2	0	0	0	0.20789	1	8533	8533		34.173	11.13	1	49051	+		10608	20311	7460	7468	12154	12154					0.005703825231876181
GFSYVPSPK	9	Unmodified	_GFSYVPSPK_					0	0	0			REV__nc|ENSG00000152683|Q6NXT4-4|SLC30A6	REV__nc|ENSG00000152683|Q6NXT4-4|SLC30A6	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	491.255643	980.496732	-1.0393	-0.00051055	3.4913	0.0017151	2.452	0.0012046	491.2576393361485	84.343	0.89067	84.343	83.765	84.656	0	-0.087083	0.002854	NaN	34.173	33	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46237	+		10609	20311	7460	7468							0.005703825231876181
GFSYVPSPK	9	Unmodified	_GFSYVPSPK_					0	0	0			REV__nc|ENSG00000152683|Q6NXT4-4|SLC30A6	REV__nc|ENSG00000152683|Q6NXT4-4|SLC30A6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	491.255643	980.496732	-0.85083	-0.00041797	2.0682	0.001016	1.2174	0.00059805	491.2566336747701	84.042	0.24683	84.477	84.341	84.588	0.43537	0.047495	0.0014558	NaN	34.173	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70354	+		10610	20311	7460	7468							0.005703825231876181
GFTASSLGVF	10	Unmodified	_GFTASSLGVF_					0	0	0			REV__ENSG00000188818|ENST00000283441|ZDHHC11	REV__ENSG00000188818|ENST00000283441|ZDHHC11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.2997131347656	2	493.2531	984.491647	-0.55196	-0.00027226	0.41191	0.00020318	-0.14005	-6.908E-05	493.2531601330196	57.396	1.7716	57.38	56.94	58.711	-0.016426					175	83	4	0	0	0	0.37624	1	4821	4821		11.511	0	1	1290600	+		10611	23033	7461	7469	12155	12155					-0.0012192133941653083
GFTDVQGVL	9	Unmodified	_GFTDVQGVL_					0	0	0			REV__ENSG00000187566|ENST00000340650|NHLRC1	REV__ENSG00000187566|ENST00000340650|NHLRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.2451171875	2	468.245275	934.475997	-1.0647	-0.00049855	0.99639	0.00046656	-0.06832	-3.199E-05	468.2456241225619	47.383	3.6723	47.402	45.915	49.587	0.018967					223	102	4	0	0	0	0.72402	1	3499	3499		38.806	3.6054	1	7165000	+		10612	22925	7462	7470	12156	12156					0.006137921435311
GFTNKFSLN	9	Unmodified	_GFTNKFSLN_					0	0	0		ENSG00000151952|ENST00000422113|TMEM132D	ENSG00000151952|ENST00000422113|TMEM132D	ENSG00000151952|ENST00000422113|TMEM132D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.2630004882812	2	514.263999	1026.51345	0.67038	0.00034475	-0.65869	-0.00033874	0.011686	6.0099E-06	514.2634451970073	50.239	0.78304	50.686	50.348	51.131	0.44761					49	18	4	0	0	0	0.67345	1	4957	4957		42.396	1.8235	1	1926100			10613	5151	7463	7471	12157	12157					0.001248834091484241
GFVEGSTL	8	Unmodified	_GFVEGSTL_					0	0	0			REV__nc|ENSG00000138400|Q5I0G3-2|MDH1B	REV__nc|ENSG00000138400|Q5I0G3-2|MDH1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.2030334472656	2	405.205618	808.396684	-0.18782	-7.6105E-05	-1.9721	-0.00079909	-2.1599	-0.0008752	405.20481127463523	77.736	2.7861	77.788	77.332	80.118	0.052696					165	97	3	0	0	0	0.85277	1	7578	7578		25.45	0	1	140160	+		10614	19470	7464	7472	12158	12158					-0.0151785481062916
GFVMLILS	8	Unmodified	_GFVMLILS_					0	0	0			REV__ENSG00000232258|ENST00000620492|TMEM114	REV__ENSG00000232258|ENST00000620492|TMEM114	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2554931640625	2	440.254057	878.493561	0.25826	0.0001137	2.8724	0.0012646	3.1307	0.0013783	440.2551628141125	62.575	1.3839	63.129	62.257	63.641	0.5545					72	31	3	0	0	0	0.86791	1	6723	6723		28.254	0	1	690880	+		10615	23770	7465	7473	12159	12159					0.04945416144846604
GFVTIHKK	8	Unmodified	_GFVTIHKK_					0	0	0			REV__nc|ENSG00000188316|A6NNW6-2|ENO4	REV__nc|ENSG00000188316|A6NNW6-2|ENO4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2801208496094	2	465.281995	928.549437	-1.1036	-0.00051349	-3.1369	-0.0014595	-4.2405	-0.001973	465.28037254514356	89.207	2.109	89.207	88.71	90.819	0					110	48	4	0	0	0	0.8347	1	8590	8590		23.042	2.5607	1	1091500	+		10616	22994	7466	7474	12160	12160					0.08230385376657523
GFVTLLLTVVF	11	Unmodified	_GFVTLLLTVVF_					0	0	0			REV__nc|ENSG00000120925|Q96K19-4|RNF170	REV__nc|ENSG00000120925|Q96K19-4|RNF170	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.86962890625	2	604.8681	1207.72165	3.1995	0.0019352	-2.3144	-0.0013999	0.88503	0.00053533	604.8668402656671	112.87	1.1902	112.84	112.7	113.89	-0.024811					43	32	2	0	0	0	0.77538	1	12554	12554		16.473	0.46637	1	550830	+		10617	29813	7467	7475	12161	12161					0.12609492273486467
GFVVKLRG	8	Unmodified	_GFVVKLRG_					0	0	0		ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2628479003906	2	438.276712	874.538872	-1.5751	-0.00069034	0.52685	0.0002309	-1.0483	-0.00045944	438.2772045657187	40.287	0.29843	40.294	40.156	40.454	0.0065002					11	7	2	0	0	0	0.4196	1	2559	2559		40.573	20.091	1	382200			10618	6525	7468	7476	12162	12162					0.09658402722220671
GFVVKLRG	8	Unmodified	_GFVVKLRG_					0	0	0		ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26287841796875	2	438.276712	874.538872	-1.5754	-0.00069045	-2.2416	-0.00098246	-3.817	-0.0016729	438.2756758903562	40.528	0.37694	40.532	40.491	40.868	0.0043983					21	15	2	0	0	0	0.4196	1	2588	2588		33.516	6.7195	1	184920			10619	6525	7468	7476	12163	12163					0.09658402722220671
GFVVKLRG	8	Unmodified	_GFVVKLRG_					0	0	0		ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.263427734375	2	438.276712	874.538872	-1.5847	-0.00069452	1.8339	0.00080377	0.24928	0.00010926	438.2775601064286	35.845	0.38813	35.876	35.684	36.072	0.031132					16	10	2	0	0	0	0.4196	1	1915	1915		40.573	15.122	1	70512			10620	6525	7468	7476	12164	12164					0.09658402722220671
GFVVKLRG	8	Unmodified	_GFVVKLRG_					0	0	0		ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2633361816406	2	438.276712	874.538872	0.044199	1.9371E-05	-3.2485	-0.0014237	-3.2043	-0.0014044	438.2753402761313	35.827	0.29305	35.766	35.564	35.857	-0.060333					13	7	2	0	0	0	0.4196	1	1920	1920		25.45	6.0902	1	98356			10621	6525	7468	7476	12165	12165					0.09658402722220671
GFVVKLRG	8	Unmodified	_GFVVKLRG_					0	0	0		ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26336669921875	2	438.276712	874.538872	0.26979	0.00011824	1.2216	0.00053542	1.4914	0.00065366	438.27814565816925	35.615	0.6829	35.863	35.398	36.081	0.24769					37	17	3	0	0	0	0.4196	1	2701	2701		26.796	6.3143	1	648520			10622	6525	7468	7476	12166	12166					0.09658402722220671
GFVVKLRG	8	Unmodified	_GFVVKLRG_					0	0	0		ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.25927734375	2	438.276712	874.538872	-1.2715	-0.00055728	1.2872	0.00056416	0.015688	6.8756E-06	438.2775657452292	40.715	0.82711	41.304	40.942	41.77	0.58915					36	23	3	0	0	0	0.4196	1	3577	3577		42.474	30.963	1	2329800			10623	6525	7468	7476	12167	12167					0.09658402722220671
GFVVKLRG	8	Unmodified	_GFVVKLRG_					0	0	0		ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.25927734375	2	438.276712	874.538872	-1.3296	-0.00058271	3.7039	0.0016233	2.3743	0.0010406	438.2794423316098	41.232	0.52723	41.866	41.496	42.023	0.6339					19	14	2	0	0	0	0.4196	1	3577	3577		42.474	30.963	1	740030			10624	6525	7468	7476	12168	12168					0.09658402722220671
GFVVLIKVLI	10	Unmodified	_GFVVLIKVLI_					0	0	0		ENST00000344337.10_1_3:122144740-122144905:-|nuORF	ENST00000344337.10_1_3:122144740-122144905:-|nuORF	ENST00000344337.10_1_3:122144740-122144905:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8800659179688	2	550.875728	1099.7369	5.0694	0.0027926	1.3496	0.00074346	6.419	0.003536	550.8764150186146	108.94	0.53165	109.03	108.77	109.3	0.09005					44	23	2	0	0	0	0.88541	1	13270	13270		11.511	0	1	1145600			10625	10291	7469	7477	12169	12169					0.19102403861393213
GFYLRVALKP	10	Unmodified	_GFYLRVALKP_					0	0	0			REV__ENST00000209929.9_1_1:171154426-171178089:+|nuORF	REV__ENST00000209929.9_1_1:171154426-171178089:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.35302734375	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.25	1	116.23	115.73	116.73	-0.02433								0	0	0	0.45132	1	12870	12870		21.96	1.013	1		+		10626	17048	7470	7478	12170	12170					0.1114287453635825
GGAAGPDC	8	Unmodified	_GGAAGPDC_					0	0	0		ENST00000263918.8_1_2:37152256-37193400:-|nuORF	ENST00000263918.8_1_2:37152256-37193400:-|nuORF	ENST00000263918.8_1_2:37152256-37193400:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	647.2785034179688	1	647.245351	646.238075	1.3606	0.00088067	0.9365	0.00060614	2.2971	0.0014868	647.2457687816639	58.864	1.0239	59.417	59.215	60.239	0.55323					33	25	2	0	0	0	0.4196	1	6196	6196		12.959	11.632	1	235440			10627	9469	7471	7479	12171	12171					-0.09919471990542661
GGAALASP	8	Unmodified	_GGAALASP_					0	0	0		ENSG00000105538|ENST00000222145|RASIP1	ENSG00000105538|ENST00000222145|RASIP1	ENSG00000105538|ENST00000222145|RASIP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.4019775390625	1	643.340966	642.33369	1.8272	0.0011755	2.4833	0.0015976	4.3105	0.0027731	643.3422618552493	105.18	0.78297	105.34	104.99	105.78	0.15584					41	19	3	0	0	0	0.4196	1	12861	12861		14.664	0	1	503590			10628	2225	7472	7480	12172	12172					-0.0017837580799096031
GGAARRAR	8	Unmodified	_GGAARRAR_					0	0	0		ENST00000530897.1_1_11:1331247-1331481:+|nuORF	ENST00000530897.1_1_11:1331247-1331481:+|nuORF	ENST00000530897.1_1_11:1331247-1331481:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.7207336425781	2	407.74136	813.468167	2.6846	0.0010946	-3.0887	-0.0012594	-0.40417	-0.00016479	407.7401985996231	102.18	0.12697	102.44	102.35	102.48	0.26322					4	2	2	0	0	0	0.4196	1	12397	12397		12.207	8.2216	1	28341			10629	13349	7473	7481	12173	12173					0.05397122457270598
GGAFGAGP	8	Unmodified	_GGAFGAGP_					0	0	0		ENSG00000167487|ENST00000300976|KLHL26	ENSG00000167487|ENST00000300976|KLHL26	ENSG00000167487|ENST00000300976|KLHL26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.2984619140625	1	633.299101	632.291825	-0.16777	-0.00010625	-3.6652	-0.0023211	-3.8329	-0.0024274	633.2966457110679	64.104	2.6981	64.07	62.816	65.514	-0.034256					164	100	3	0	0	0	0.80127	1	6159	6159		16.705	0	1	238550			10630	6294	7474	7482	12174	12174					-0.03902931496520523
GGAGAGAH	8	Unmodified	_GGAGAGAH_					0	0	0			REV__ENSG00000261221|ENST00000568956|ZNF865	REV__ENSG00000261221|ENST00000568956|ZNF865	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.27392578125	1	597.273949	596.266673	-0.56526	-0.00033761	-1	-0.00059729	-1.5653	-0.0009349	597.2732585698234	58.443	4.568	58.429	56.569	61.137	-0.013668					252	149	2	0	0	0	0.80127	1	5672	5672		16.705	0	1	311590	+		10631	23943	7475	7483	12175	12175					-0.047609862990952934
GGAGAGAH	8	Unmodified	_GGAGAGAH_					0	0	0			REV__ENSG00000261221|ENST00000568956|ZNF865	REV__ENSG00000261221|ENST00000568956|ZNF865	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.2709350585938	1	597.273949	596.266673	-0.24992	-0.00014927	-1.2227	-0.00073031	-1.4727	-0.00087959	597.273098187251	58.474	4.6181	58.467	56.511	61.129	-0.0074425					297	190	2	0	0	0	0.84567	2	4884	4849;4884		24.504	14.319	1	285250	+		10632	23943	7475	7483	12176;12177	12177					-0.047609862990952934
GGAGAGAH	8	Unmodified	_GGAGAGAH_					0	0	0			REV__ENSG00000261221|ENST00000568956|ZNF865	REV__ENSG00000261221|ENST00000568956|ZNF865	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		1	597.273949	596.266673	-0.85053	-0.000508	-2.4905	-0.0014875	-3.341	-0.0019955	597.2734423646866	58.75	4.4825	58.75	56.699	61.182	0	0.23204	-0.0007086	NaN	16.705	303	191	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	261070	+		10633	23943	7475	7483							-0.047609862990952934
GGAGAGAH	8	Unmodified	_GGAGAGAH_					0	0	0			REV__ENSG00000261221|ENST00000568956|ZNF865	REV__ENSG00000261221|ENST00000568956|ZNF865	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		1	597.273949	596.266673	0.50815	0.0003035	-4.0285	-0.0024061	-3.5204	-0.0021026	597.2725876773561	58.541	4.4629	58.51	56.526	60.989	-0.030888	-0.0080797	-0.0016272	NaN	16.705	303	132	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	305390	+		10634	23943	7475	7483							-0.047609862990952934
GGAGAGAH	8	Unmodified	_GGAGAGAH_					0	0	0			REV__ENSG00000261221|ENST00000568956|ZNF865	REV__ENSG00000261221|ENST00000568956|ZNF865	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		1	597.273949	596.266673	-2.0888	-0.0012476	2.5413	0.0015179	0.45251	0.00027027	597.2741092677275	58.319	4.4788	58.353	56.518	60.997	0.033905	-0.16525	0.0022968	NaN	16.705	280	138	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	311740	+		10635	23943	7475	7483							-0.047609862990952934
GGAGAGAH	8	Unmodified	_GGAGAGAH_					0	0	0			REV__ENSG00000261221|ENST00000568956|ZNF865	REV__ENSG00000261221|ENST00000568956|ZNF865	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		1	597.273949	596.266673	0.5185	0.00030969	-4.8408	-0.0028913	-4.3223	-0.0025816	597.272585815761	58.489	4.4845	58.6	56.649	61.134	0.11027	0.081473	-0.0021124	NaN	16.705	337	184	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	332320	+		10636	23943	7475	7483							-0.047609862990952934
GGAGCGAV	8	Unmodified	_GGAGCGAV_					0	0	0			REV__ENSG00000179178|ENST00000439858|TMEM125	REV__ENSG00000179178|ENST00000439858|TMEM125	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8035278320312	1	591.255522	590.248246	0.51661	0.00030545	0.84977	0.00050243	1.3664	0.00080788	591.2566530043983	62.695	2.3745	62.662	62.11	64.485	-0.033714					178	94	3	0	0	0	0.4196	1	6109	6109		16.705	0	1	425200	+		10637	22324	7476	7484	12178	12178					-0.06326864265315635
GGAGGHVS	8	Unmodified	_GGAGGHVS_					0	0	0			REV__CON__Q99PS0	REV__CON__Q99PS0	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.3170776367188	1	641.300164	640.292888	1.5272	0.00097937	-3.1266	-0.0020051	-1.5995	-0.0010257	641.298298952996	61.608	1.0306	61.715	61.379	62.409	0.10743					67	48	2	0	0	0	0.4196	1	5390	5390		20.482	1.1219	1	349930	+	+	10638	16029	7477	7485	12179	12179					-0.04164717127616768
GGAGGHVS	8	Unmodified	_GGAGGHVS_					0	0	0			REV__CON__Q99PS0	REV__CON__Q99PS0	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8822631835938	1	641.300164	640.292888	-1.1553	-0.00074088	2.5653	0.0016451	1.41	0.00090423	641.2998370693033	96.362	0.17263	96.565	96.488	96.661	0.20241					5	3	2	0	0	0	0.4196	1	9864	9864		8.8223	0	1	22715	+	+	10639	16029	7477	7485	12180	12180					-0.04164717127616768
GGAGGHVS	8	Unmodified	_GGAGGHVS_					0	0	0			REV__CON__Q99PS0	REV__CON__Q99PS0	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		1	641.300164	640.292888	-0.058601	-3.7581E-05	-1.589	-0.001019	-1.6476	-0.0010566	641.2990548771198	61.714	1.221	61.681	61.395	62.616	-0.033169	-0.062984	0.00021556	NaN	20.482	89	53	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	298380	+	+	10640	16029	7477	7485							-0.04164717127616768
GGAGGHVS	8	Unmodified	_GGAGGHVS_					0	0	0			REV__CON__Q99PS0	REV__CON__Q99PS0	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		1	641.300164	640.292888	-0.091663	-5.8784E-05	-1.68	-0.0010774	-1.7716	-0.0011361	641.2990131998612	61.76	1.017	61.79	61.454	62.471	0.029575	0.045618	0.00015724	NaN	20.482	70	45	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	386410	+	+	10641	16029	7477	7485							-0.04164717127616768
GGAGPGCP	8	Unmodified	_GGAGPGCP_					0	0	0			REV__ENST00000375098.7_1_9:100872213-100881366:-|nuORF	REV__ENST00000375098.7_1_9:100872213-100881366:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.4044189453125	1	615.255522	614.248246	-0.64153	-0.0003947	-1.9663	-0.0012098	-2.6078	-0.0016045	615.2541347192491	70.918	1.0269	70.994	70.705	71.732	0.076225					76	49	2	0	0	0	0.4196	1	6409	6409		1.619	0	1	140500	+		10642	25806	7478	7486	12181	12181					-0.0743086426531363
GGAGPSFSSSL	11	Unmodified	_GGAGPSFSSSL_					0	0	0			REV__ENST00000462458.5_1_1:156374348-156385256:-|nuORF	REV__ENST00000462458.5_1_1:156374348-156385256:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7287902832031	2	483.729989	965.445425	-0.38753	-0.00018746	-2.2221	-0.0010749	-2.6096	-0.0012623	483.72871360991206	72.116	0.82655	72.666	72.154	72.981	0.55008					51	19	4	0	0	0	0.36477	1	8062	8062		62.107	1.1355	1	1356300	+		10643	27055	7479	7487	12182	12182					-0.03867986241516519
GGAGTAPL	8	Unmodified	_GGAGTAPL_					0	0	0		ENST00000458502.2_1_17:20744359-20744572:+|nuORF	REV__ENST00000600059.5_1_19:48988799-49002658:-|nuORF	REV__ENST00000600059.5_1_19:48988799-49002658:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4056396484375	1	643.340966	642.33369	2.6808	0.0017246	2.9588	0.0019035	5.6396	0.0036282	643.3424219312992	105.47	0.30461	105.43	105.19	105.49	-0.03714					10	6	2	0	0	0	0.4196	1	11631	11631		21.702	9.4955	1	46859			10644	29307	7480	7488	12183	12183					-0.0017837580799096031
GGAHAGGA	8	Unmodified	_GGAHAGGA_					0	0	0			REV__ENST00000325995.7_1_8:124664024-124664426:-|nuORF	REV__ENST00000325995.7_1_8:124664024-124664426:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.275390625	1	597.273949	596.266673	-0.24992	-0.00014927	-1.2227	-0.00073031	-1.4727	-0.00087959	597.273098187251	58.474	4.6181	58.467	56.511	61.129	-0.0074425					297	190	2	0	0	0	0.85228	1	4874	4874		10.185	0	1	285250	+		10645	25071	7481	7489	12184	12184					-0.047609862990952934
GGAPQSLRK	9	Unmodified	_GGAPQSLRK_					0	0	0			REV__nc|ENSG00000085978|Q676U5-4|ATG16L1	REV__nc|ENSG00000085978|Q676U5-4|ATG16L1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2641296386719	2	457.264333	912.514114	-1.2803	-0.00058543	1.4305	0.00065413	0.15023	6.8693E-05	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.76764	1	7337	7337		34.173	3.6689	1	812040	+		10646	16901	7482	7490	12185	12185					0.054357228488470355
GGAPQSLRK	9	Unmodified	_GGAPQSLRK_					0	0	0			REV__nc|ENSG00000085978|Q676U5-4|ATG16L1	REV__nc|ENSG00000085978|Q676U5-4|ATG16L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2631530761719	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.78124	1	8172	8172		30.318	2.0634	1	4061400	+		10647	16901	7482	7490	12186	12186					0.054357228488470355
GGAPRERP	8	Unmodified	_GGAPRERP_					0	0	0			REV__ENST00000447263.1_1_1:39980824-39982159:+|nuORF	REV__ENST00000447263.1_1_1:39980824-39982159:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2276916503906	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.884	1	7799	7799		33.516	0	1	743780	+		10648	26817	7483	7491	12187	12187					0.015265941262214255
GGAPRPPR	8	Unmodified	_GGAPRPPR_					0	0	0			REV__ENST00000303221.9_1_5:49724015-49737091:-|nuORF	REV__ENST00000303221.9_1_5:49724015-49737091:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2327880859375	2	404.232836	806.45112	-0.18723	-7.5686E-05	0.58387	0.00023602	0.39664	0.00016033	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.85277	1	8547	8547		25.45	0	1	4185000	+		10649	24796	7484	7492	12188	12188					0.04015201851461825
GGARPVYLLAM	11	Unmodified	_GGARPVYLLAM_					0	0	0		ENST00000549777.5_1_12:50414940-50419216:-|nuORF	ENST00000549777.5_1_12:50414940-50419216:-|nuORF	ENST00000549777.5_1_12:50414940-50419216:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.319091796875	2	574.318251	1146.62195	-0.44784	-0.0002572	2.6867	0.001543	2.2389	0.0012858	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.67493	1	9446	9446		35.618	0.46626	1	1099700			10650	13644	7485	7493	12189	12189					0.05450351387912633
GGAVLLPVS	9	Unmodified	_GGAVLLPVS_					0	0	0		ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.25616455078125	2	406.747453	811.480354	0.11889	4.8359E-05	2.3044	0.00093731	2.4233	0.00098567	406.74832936940317	40.368	1.329	40.337	39.363	40.692	-0.030991					47	34	2	0	0	0	0.20789	1	2844	2844		19.36	0	1	106710			10651	4546	7486	7494	12190	12190					0.06707301357084816
GGCCSGFEEE	10	Unmodified	_GGCCSGFEEE_					0	0	0		ENST00000320623.9_1_16:69752155-69760649:-|nuORF	ENST00000320623.9_1_16:69752155-69760649:-|nuORF	ENST00000320623.9_1_16:69752155-69760649:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.16851806640625	2	509.16805	1016.32155	0.081212	4.1351E-05	0.047349	2.4108E-05	0.12856	6.5459E-05	509.1679988447187	59.769	0.74619	60.322	60.038	60.785	0.55323					34	19	2	0	0	0	0.86718	1	6335	6335		27.882	4.8398	1	939490			10652	10028	7487	7495	12191	12191					-0.18596148395670298
GGDHPSFT	8	Unmodified	_GGDHPSFT_					0	0	0		ENSG00000171467|ENST00000361428|ZNF318;nc|ENSG00000171467|Q5VUA4-2|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.29229736328125	2	409.177392	816.340232	-0.079451	-3.2509E-05	-4.2104	-0.0017228	-4.2899	-0.0017553	409.17630861058217	74.243	0.20656	74.801	74.674	74.881	0.55891					6	4	2	0	0	0	0.4196	1	8374	8374		24.203	0	1	31383			10653	6667	7488	7496	12192	12192					-0.07528482647273904
GGEADWTAPV	10	Unmodified	_GGEADWTAPV_					0	0	0			REV__AluSz_dup47996|chr9:36681508-36681817:-|1.64201677267165|0.0574684267580931|4.84|63.0|6|2|sense	REV__AluSz_dup47996|chr9:36681508-36681817:-|1.64201677267165|0.0574684267580931|4.84|63.0|6|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.7746887207031	2	501.729989	1001.44543	-0.71165	-0.00035706	-0.014462	-7.2559E-06	-0.72612	-0.00036431	501.72996752794415	49.267	0.41198	49.727	49.54	49.952	0.45983					15	9	2	0	0	0	0.37624	1	4776	4776		51.335	13.524	1	401070	+		10654	15400	7489	7497	12193	12193					-0.05523986241541934
GGEGKMCICFS	11	Carbamidomethyl (C),Oxidation (M)	_GGEGKM(Oxidation (M))CIC(Carbamidomethyl (C))FS_	GGEGKMC(0.072)IC(0.928)FS	GGEGKM(1)CICFS	GGEGKMC(-11)IC(11)FS	GGEGKM(41)CICFS	0	1	1		nc|ENSG00000156510|Q2TB90-3|HKDC1	nc|ENSG00000156510|Q2TB90-3|HKDC1	nc|ENSG00000156510|Q2TB90-3|HKDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	602.7418212890625	2	602.743402	1203.47225	0.75911	0.00045755	-3.2234	-0.0019429	-2.4643	-0.0014854	602.7413209486597	84.845	1.0398	84.993	84.431	85.471	0.14824					51	23	3	0	0	0	0.62614	1	8255	8255		41.427	7.2541	2	387480			10655	15016	7490	7498	12194	12194	201;202	218			-0.12134705008497804
GGFGGVGG	8	Unmodified	_GGFGGVGG_					0	0	0			REV__ENSG00000189182|ENST00000341809|KRT77	REV__ENSG00000189182|ENST00000341809|KRT77	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	607.2838134765625	1	607.283451	606.276175	-0.38772	-0.00023546	0.66243	0.00040228	0.27471	0.00016683	607.2836845860961	34.538	3.4889	34.533	32.676	36.164	-0.0047417					169	82	3	0	0	0	0.94139	1	1958	1958		5.0869	0	1	170030	+	+	10656	16026	7491	7499	12195	12195					-0.04271218013559519
GGFGGVGG	8	Unmodified	_GGFGGVGG_					0	0	0			REV__ENSG00000189182|ENST00000341809|KRT77	REV__ENSG00000189182|ENST00000341809|KRT77	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		1	607.283451	606.276175	-0.38772	-0.00023546	0.66243	0.00040228	0.27471	0.00016683	607.2836845860961	34.538	3.4889	34.533	32.676	36.164	-0.0047417	-0.10165	0.0001777	NaN	5.0869	169	82	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	170030	+	+	10657	16026	7491	7499							-0.04271218013559519
GGFGGVGG	8	Unmodified	_GGFGGVGG_					0	0	0			REV__ENSG00000189182|ENST00000341809|KRT77	REV__ENSG00000189182|ENST00000341809|KRT77	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		1	607.283451	606.276175	0.31127	0.00018903	0.049838	3.0266E-05	0.36111	0.0002193	607.2832961040364	34.628	2.5722	34.737	33.488	36.06	0.10829	0.10165	-0.00019432	NaN	5.0869	125	101	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129090	+	+	10658	16026	7491	7499							-0.04271218013559519
GGFLGVHI	8	Unmodified	_GGFLGVHI_					0	0	0		ENST00000464744.5_2_13:37633372-37633498:-|nuORF	ENST00000464744.5_2_13:37633372-37633498:-|nuORF	ENST00000464744.5_2_13:37633372-37633498:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2278747558594	2	400.226688	798.438824	-0.058285	-2.3327E-05	2.876	0.0011511	2.8177	0.0011277	400.2280059844884	52.237	1.9334	52.905	52.23	54.164	0.66729					76	46	3	0	0	0	0.84567	1	5293	5293		24.504	0	1	9506900			10659	12096	7492	7500	12196	12196					0.0315416538842328
GGFNKTASFY	10	Unmodified	_GGFNKTASFY_					0	0	0		ENST00000371989.7_1_9:136230254-136230347:-|nuORF	ENST00000371989.7_1_9:136230254-136230347:-|nuORF	ENST00000371989.7_1_9:136230254-136230347:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.2591552734375	2	546.261456	1090.50836	-1.5113	-0.00082559	-4.4802	-0.0024473	-5.9915	-0.0032729	546.2596201303288	59.665	1.0379	60.055	59.609	60.646	0.39077					64	26	3	0	0	0	0.23822	1	6342	6342		79.713	2.9384	1	2812900			10660	10682	7493	7501	12197	12197					-0.03327420453456398
GGGAGAGGG	9	Unmodified	_GGGAGAGGG_					0	0	0		ENSG00000174279|ENST00000308618|EVX2	ENSG00000174279|ENST00000308618|EVX2	ENSG00000174279|ENST00000308618|EVX2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3402099609375	1	560.242315	559.235038	0.3949	0.00022124	0.54556	0.00030564	0.94046	0.00052689	560.2428616685477	102.1	0.3857	102.3	102.18	102.56	0.19484					13	9	2	0	0	0	0.20789	1	10746	10746		14.664	0	1	78845			10661	6922	7494	7502	12198	12198					-0.06220979053045994
GGGAGASE	8	Unmodified	_GGGAGASE_					0	0	0			REV__ENST00000241527.10_1_2:242029410-242034678:-|nuORF	REV__ENST00000241527.10_1_2:242029410-242034678:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.8623046875	1	605.252545	604.245269	0.70061	0.00042404	2.9249	0.0017703	3.6255	0.0021943	605.2541335303133	78.064	1.517	78.201	77.632	79.149	0.13667					77	47	2	0	0	0	0.4196	1	7299	7299		8.8223	0	1	324370	+		10662	24230	7495	7503	12199	12199					-0.07268416118472487
GGGAGASE	8	Unmodified	_GGGAGASE_					0	0	0			REV__ENST00000241527.10_1_2:242029410-242034678:-|nuORF	REV__ENST00000241527.10_1_2:242029410-242034678:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		1	605.252545	604.245269	1.0174	0.0006158	2.6885	0.0016272	3.7059	0.002243	605.2540329749721	78.103	1.3552	78.23	77.636	78.991	0.12695	0.020583	-0.00050704	NaN	8.8223	69	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	284150	+		10663	24230	7495	7503							-0.07268416118472487
GGGAGASE	8	Unmodified	_GGGAGASE_					0	0	0			REV__ENST00000241527.10_1_2:242029410-242034678:-|nuORF	REV__ENST00000241527.10_1_2:242029410-242034678:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		1	605.252545	604.245269	-0.92541	-0.00056011	4.6888	0.0028379	3.7634	0.0022778	605.2552380853532	78.103	1.51	78.197	77.7	79.21	0.094208	-0.012193	0.00070366	NaN	8.8223	83	51	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	346640	+		10664	24230	7495	7503							-0.07268416118472487
GGGALCPLR	9	Unmodified	_GGGALCPLR_					0	0	0		ENST00000549318.5_3_12:56705145-56708722:-|nuORF	ENST00000549318.5_3_12:56705145-56708722:-|nuORF	ENST00000549318.5_3_12:56705145-56708722:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.22796630859375	2	422.228905	842.443257	-0.23253	-9.8181E-05	-1.6254	-0.00068629	-1.8579	-0.00078448	422.22799132791033	63.825	0.73808	63.79	63.288	64.026	-0.034252					56	26	3	0	0	0	0.7932	1	6081	6081		19.36	0	1	242530			10665	13632	7496	7504	12200	12200					0.015733065396716484
GGGGCQLLSSV	11	Unmodified	_GGGGCQLLSSV_					0	0	0		ENST00000331113.8_1_7:119913735-119913927:+|nuORF	ENST00000331113.8_1_7:119913735-119913927:+|nuORF	ENST00000331113.8_1_7:119913735-119913927:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.2364807128906	2	489.239667	976.46478	-2.6543	-0.0012986	-3.8663	-0.0018915	-6.5206	-0.0031901	489.2378098143177	63.789	1.3068	63.816	63.573	64.88	0.027142					83	36	4	0	0	0	0.61369	1	5976	5976		42.864	0.46813	1	723550			10666	10116	7497	7505	12201	12201					-0.02439353222257523
GGGGFLPAR	9	Unmodified	_GGGGFLPAR_					0	0	0		ENST00000550867.5_1_12:49494935-49504419:-|nuORF;ENST00000552153.5_1_12:49497576-49504491:-|nuORF;ENST00000548983.1_1_12:49500779-49504485:-|nuORF;ENST00000551535.1_1_12:49500594-49504491:-|nuORF	ENST00000550867.5_1_12:49494935-49504419:-|nuORF	ENST00000550867.5_1_12:49494935-49504419:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.2297058105469	2	416.22722	830.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.044	1	35.15	34.65	35.65	0.10603								0	0	0	0.29103	1	1817	1817		40.573	10.731	1				10667	13663	7498	7506	12202	12202					0.017883797573290394
GGGGGGGNGPH	11	Unmodified	_GGGGGGGNGPH_					0	0	0			REV__ENSG00000151322|ENST00000356141|NPAS3	REV__ENSG00000151322|ENST00000356141|NPAS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.17559814453125	2	412.175715	822.336878	-1.9151	-0.00078935	1.0472	0.00043162	-0.86789	-0.00035773	412.1764543351216	94.772	2.5614	94.974	94.403	96.965	0.20242					141	60	6	0	0	0	0.72228	1	9669	9669		27.882	1.0861	1	13873000	+		10668	15591	7499	7507	12203	12203					-0.0813973270128372
GGGGGGHV	8	Unmodified	_GGGGGGHV_					0	0	0			REV__ENST00000601673.1_7:6523004-6523760:+|nuORF	REV__ENST00000601673.1_7:6523004-6523760:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.6057739257812	1	597.273949	596.266673	0.88767	0.00053018	-4.1467	-0.0024767	-3.259	-0.0019465	597.2713526996835	72.004	0.36974	72.135	71.936	72.306	0.13145					13	12	2	0	0	0	0.4196	1	6573	6573		5.0869	0	1	55212	+		10669	29323	7500	7508	12204	12204					-0.047609862990952934
GGGGGGKG	8	Unmodified	_GGGGGGKG_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54;ENST00000431312.2_1_22:38881942-38884127:-|nuORF;ENSG00000204442|ENST00000375915|NALF1;nc|ENSG00000100201|Q92841-3|DDX17	ENSG00000248713|ENST00000511828|C4orf54;ENSG00000204442|ENST00000375915|NALF1;REV__ENSG00000155816|ENST00000319653|FMN2;REV__ENSG00000183770|ENST00000648323|FOXL2;nc|ENSG00000100201|Q92841-3|DDX17;REV__ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.2594604492188	1	546.26305	545.255774	-1.5271	-0.00083422	-3.5714	-0.0019509	-5.0986	-0.0027852	546.2640771668284	59.613	0.84994	60.004	59.483	60.333	0.39077					27	20	2	0	0	0	0.95071	1	6270	6270		4.6817	0	1	628930			10670	8832;8443;20446;14810;23860;22625	7501	7509	12205	12205					-0.03504388673377434
GGGGGGMV	8	Unmodified	_GGGGGGMV_					0	0	0			REV__ENST00000563748.5_1_15:34652212-34654781:-|nuORF	REV__ENST00000563748.5_1_15:34652212-34654781:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8030395507812	1	591.255522	590.248246	-2.419	-0.0014302	3.8287	0.0022637	1.4097	0.00083349	591.2584421453461	62.769	2.2723	62.797	62.168	64.44	0.028133					205	93	3	0	0	0	0.4196	1	5998	5998		10.185	5.0979	1	547310	+		10671	28825	7502	7510	12206	12206					-0.06326864265315635
GGGGGKSGG	9	Unmodified	_GGGGGKSGG_					0	0	0		ENSG00000108091|ENST00000263102|CCDC6	ENSG00000108091|ENST00000263102|CCDC6	ENSG00000108091|ENST00000263102|CCDC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.294677734375	1	633.295079	632.287802	-0.33818	-0.00021417	2.814	0.0017821	2.4758	0.0015679	633.296805429476	64.635	2.7964	64.673	62.801	65.598	0.037849					198	115	2	0	0	0	0.7932	1	5781	5781		7.1934	0	1	214370			10672	2392	7503	7511	12207	12207					-0.04305020990227604
GGGGGYGVKPE	11	Unmodified	_GGGGGYGVKPE_					0	0	0		ENST00000549687.5_1_12:100660930-100676770:+|nuORF	ENST00000549687.5_1_12:100660930-100676770:+|nuORF	ENST00000549687.5_1_12:100660930-100676770:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.2362060546875	2	489.237981	976.461409	-0.77305	-0.00037821	-2.5786	-0.0012615	-3.3516	-0.0016398	489.23682963313604	63.081	1.9408	63.104	62.828	64.768	0.022984					241	80	5	0	0	0	0.60058	1	5684	5684		44.377	6.5657	1	3852300			10673	13643	7504	7512	12208	12208					-0.02776280004616183
GGGGHGVG	8	Unmodified	_GGGGHGVG_					0	0	0		ENST00000300087.6_1_16:23652841-23652898:+|nuORF	ENST00000300087.6_1_16:23652841-23652898:+|nuORF	ENST00000300087.6_1_16:23652841-23652898:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.2741088867188	1	597.273949	596.266673	-0.24992	-0.00014927	-1.2227	-0.00073031	-1.4727	-0.00087959	597.273098187251	58.474	4.6181	58.467	56.511	61.129	-0.0074425					297	190	2	0	0	0	0.85228	1	4826	4826		10.185	0	1	285250			10674	9789	7505	7513	12209	12209					-0.047609862990952934
GGGGKGGG	8	Unmodified	_GGGGKGGG_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54;REV__ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.2593383789062	1	546.26305	545.255774	-1.5271	-0.00083422	-3.5714	-0.0019509	-5.0986	-0.0027852	546.2640771668284	59.613	0.84994	60.004	59.483	60.333	0.39077					27	20	2	0	0	0	0.95071	1	6261	6261		4.6817	0	1	628930			10675	8832;23860	7506	7514	12210	12210					-0.03504388673377434
GGGGSPFG	8	Unmodified	_GGGGSPFG_					0	0	0			REV__ENST00000487509.6_1_16:31199536-31202756:+|nuORF	REV__ENST00000487509.6_1_16:31199536-31202756:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3760986328125	1	635.278366	634.271089	1.5038	0.00095534	1.1484	0.00072957	2.6523	0.0016849	635.280479837053	112.18	0.092255	112.28	112.2	112.29	0.10638					6	2	3	0	0	0	0.4196	1	12078	12078		9.4706	0	1	1474800	+		10676	16969	7507	7515	12211	12211					-0.06067521876184401
GGGGSPPC	8	Unmodified	_GGGGSPPC_					0	0	0		ENST00000418924.6_1_14:93042630-93154594:+|nuORF;ENSG00000100599|ENST00000216487|RIN3	ENST00000418924.6_1_14:93042630-93154594:+|nuORF	ENST00000418924.6_1_14:93042630-93154594:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	630.8192138671875	1	631.250437	630.24316	-0.48429	-0.00030571	3.0733	0.00194	2.589	0.0016343	631.2521895341945	63.31	1.3689	63.337	62.774	64.143	0.027397					99	54	2	0	0	0	0.4196	1	6000	6000		1.4648	0	1	164630			10677	1854	7508	7516	12212	12212					-0.0867516812793383
GGGHRGGFP	9	Unmodified	_GGGHRGGFP_					0	0	0		ENSG00000157240|ENST00000287934|FZD1	ENSG00000157240|ENST00000287934|FZD1	ENSG00000157240|ENST00000287934|FZD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.2059326171875	2	421.206818	840.399084	-2.1644	-0.00091167	2.8681	0.001208	0.70364	0.00029638	421.20790562481193	16.945	0.12266	16.945	16.892	17.014	0					8	5	2	0	0	0	0.76996	1	174	174		33.516	3.674	1	28611			10678	5419	7509	7517	12213	12213					-0.027499615622787132
GGGLRLRF	8	Unmodified	_GGGLRLRF_					0	0	0			REV__ENST00000310421.4_1_8:67579238-67579442:-|nuORF	REV__ENST00000310421.4_1_8:67579238-67579442:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26324462890625	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.82464	1	3148	3148		21.702	0	1	22924000	+		10679	24886	7510	7518	12214	12214					0.07144347919643224
GGGLRPLVLM	10	Unmodified	_GGGLRPLVLM_					0	0	0		ENST00000397110.6_1_22:37576381-37576498:-|nuORF	ENST00000397110.6_1_22:37576381-37576498:-|nuORF	ENST00000397110.6_1_22:37576381-37576498:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8006591796875	2	506.802237	1011.58992	-0.74642	-0.00037829	-1.7572	-0.00089057	-2.5037	-0.0012689	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.86452	1	3647	3647		30.504	5.0535	1	258120			10680	11138	7511	7519	12215	12215					0.08458983704758793
GGGLSCGPAGR	11	Unmodified	_GGGLSCGPAGR_					0	0	0			REV__ENST00000520647.5_1_5:153789264-153792107:+|nuORF	REV__ENST00000520647.5_1_5:153789264-153792107:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2252502441406	2	466.224351	930.434149	-0.39455	-0.00018395	3.3299	0.0015525	2.9354	0.0013686	466.22572947027686	79.005	1.1051	79.416	79.1	80.205	0.41059					49	25	3	0	0	0	0.62614	1	9064	9064		41.427	0	1	1043700	+		10681	28107	7512	7520	12216	12216					-0.033850868166496184
GGGLSSSYLN	10	Unmodified	_GGGLSSSYLN_					0	0	0			REV__ENSG00000120820|ENST00000360814|GLT8D2	REV__ENSG00000120820|ENST00000360814|GLT8D2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7286376953125	2	477.729989	953.445425	-0.36177	-0.00017283	-3.034	-0.0014494	-3.3957	-0.0016222	477.7286664031754	95.828	1.4042	96.232	95.809	97.213	0.40451					90	33	5	0	0	0	0.77314	1	11560	11560		40.778	0.20554	1	7034800	+		10682	18433	7513	7521	12217	12217					-0.033159862415232055
GGGPGTRGGHN	11	Unmodified	_GGGPGTRGGHN_					0	0	0		ENST00000565736.1_1_16:29815990-29816668:+|nuORF	ENST00000565736.1_1_16:29815990-29816668:+|nuORF	ENST00000565736.1_1_16:29815990-29816668:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7277526855469	2	483.728646	965.44274	-0.32675	-0.00015806	0.4057	0.00019625	0.078946	3.8189E-05	483.72872071539695	73.085	0.99957	73.639	72.943	73.942	0.55386					71	26	4	0	0	0	0.41466	1	8229	8229		58.23	1.7961	1	1309200			10683	13922	7514	7522	12218	12218					-0.041363968558016495
GGGPRGLLSAS	11	Unmodified	_GGGPRGLLSAS_					0	0	0		ENST00000311350.7_1_7:35734046-35734675:-|nuORF	ENST00000311350.7_1_7:35734046-35734675:-|nuORF	ENST00000311350.7_1_7:35734046-35734675:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.2669982910156	2	486.267073	970.519593	0.080189	3.8993E-05	-0.13772	-6.6968E-05	-0.057528	-2.7974E-05	486.2668793256364	86.146	4.4086	86.59	84.867	89.275	0.44331					281	107	4	0	0	0	0.60058	1	10019	10019		44.377	0	1	1279400			10684	9927	7515	7523	12219	12219					0.033154016406683695
GGGSAHAQH	9	Unmodified	_GGGSAHAQH_					0	0	0		ENST00000354410.9_2_15:100106036-100138700:+|nuORF	ENST00000354410.9_2_15:100106036-100138700:+|nuORF	ENST00000354410.9_2_15:100106036-100138700:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.1855163574219	2	411.186083	820.357613	2.6341	0.0010831	-2.308	-0.00094901	0.32611	0.00013409	411.18505067762544	104.06	1.4942	104.25	103.81	105.3	0.18887					65	37	2	0	0	0	0.76764	1	12641	12641		34.173	5.023	1	862490			10685	10338	7516	7524	12220	12220					-0.05975142321619842
GGGSAHAQH	9	Unmodified	_GGGSAHAQH_					0	0	0		ENST00000354410.9_2_15:100106036-100138700:+|nuORF	ENST00000354410.9_2_15:100106036-100138700:+|nuORF	ENST00000354410.9_2_15:100106036-100138700:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	411.186083	820.357613	-1.7908	-0.00073637	1.3027	0.00053564	-0.48816	-0.00020073	411.1861355327798	103.83	0.49699	104.01	103.74	104.23	0.17938	-0.098539	0.003084	NaN	34.173	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32109			10686	10338	7516	7524							-0.05975142321619842
GGGSAHAQH	9	Unmodified	_GGGSAHAQH_					0	0	0		ENST00000354410.9_2_15:100106036-100138700:+|nuORF	ENST00000354410.9_2_15:100106036-100138700:+|nuORF	ENST00000354410.9_2_15:100106036-100138700:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	411.186083	820.357613	0.73385	0.00030175	-1.2811	-0.00052676	-0.54722	-0.00022501	411.18541338318175	103.83	0.46296	103.94	103.86	104.32	0.11685	-0.16625	0.00095918	NaN	34.173	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46125			10687	10338	7516	7524							-0.05975142321619842
GGGTVLPSE	9	Unmodified	_GGGTVLPSE_					0	0	0		nc|ENSG00000140534|Q7Z2Z1-2|TICRR;ENSG00000140534|ENST00000268138|TICRR	nc|ENSG00000140534|Q7Z2Z1-2|TICRR	nc|ENSG00000140534|Q7Z2Z1-2|TICRR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.7103271484375	2	408.708525	815.402498	-0.4052	-0.00016561	2.5412	0.0010386	2.136	0.00087299	408.7094839420539	16.578	0.32012	16.498	16.405	16.725	-0.080017					23	12	3	0	0	0	0.72402	1	136	136		38.806	1.647	1	120360			10688	4443	7517	7525	12221	12221					-0.012587562989438084
GGGVRGPPGVA	11	Unmodified	_GGGVRGPPGVA_					0	0	0			REV__ENST00000344697.2_1_3:43122946-43147521:-|nuORF	REV__ENST00000344697.2_1_3:43122946-43147521:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	462.2557067871094	2	462.256508	922.498464	-1.1479	-0.0005306	-0.43284	-0.00020008	-1.5807	-0.00073069	462.2561316010427	50.7	0.93532	50.73	50.218	51.154	0.029629					48	30	3	0	0	0	0.68378	1	4014	4014		34.173	4.331	1	309990	+		10689	25304	7518	7526	12222	12222					0.03411436331793993
GGGYELREP	9	Unmodified	_GGGYELREP_					0	0	0		nc|ENSG00000188779|P84550-2|SKOR1;nc|ENSG00000188779|P84550-3|SKOR1;ENSG00000188779|ENST00000380035|SKOR1	nc|ENSG00000188779|P84550-2|SKOR1	nc|ENSG00000188779|P84550-2|SKOR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.2364196777344	2	489.237981	976.461409	-0.77305	-0.00037821	-2.5786	-0.0012615	-3.3516	-0.0016398	489.23682963313604	63.081	1.9408	63.104	62.828	64.768	0.022984					241	80	5	0	0	0	0.76255	1	5493	5493		35.618	0	1	3852300			10690	15171	7519	7527	12223	12223					-0.027762800046275515
GGGYTIRNV	9	Unmodified	_GGGYTIRNV_					0	0	0		nc|ENSG00000196591|Q92769-3|HDAC2;ENSG00000196591|ENST00000519065|HDAC2;chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1;ENSG00000116478|ENST00000373548|HDAC1	nc|ENSG00000196591|Q92769-3|HDAC2	nc|ENSG00000196591|Q92769-3|HDAC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.7486572265625	2	468.748516	935.482479	0.15181	7.1158E-05	-0.41104	-0.00019267	-0.25924	-0.00012152	468.74827770995927	39.473	0.60802	39.443	39.157	39.765	-0.03027					21	14	2	0	0	0	0.75725	2	2746	2735;2746		36.447	7.2972	1	156590			10691	8079	7520	7528	12224;12225	12225					0.012157300948956618
GGGYTIRNV	9	Unmodified	_GGGYTIRNV_					0	0	0		nc|ENSG00000196591|Q92769-3|HDAC2;ENSG00000196591|ENST00000519065|HDAC2;chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1;ENSG00000116478|ENST00000373548|HDAC1	nc|ENSG00000196591|Q92769-3|HDAC2	nc|ENSG00000196591|Q92769-3|HDAC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.7482604980469	2	468.748516	935.482479	-1.2414	-0.00058191	1.1326	0.00053089	-0.10883	-5.1013E-05	468.7489417985906	39.365	0.62746	39.318	39.035	39.663	-0.047005					27	14	3	0	0	0	0.3164	1	2825	2825		63.534	22.756	1	194640			10692	8079	7520	7528	12226	12226					0.012157300948956618
GGGYTIRNV	9	Unmodified	_GGGYTIRNV_					0	0	0		nc|ENSG00000196591|Q92769-3|HDAC2;ENSG00000196591|ENST00000519065|HDAC2;chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1;ENSG00000116478|ENST00000373548|HDAC1	nc|ENSG00000196591|Q92769-3|HDAC2	nc|ENSG00000196591|Q92769-3|HDAC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.7485046386719	2	468.748516	935.482479	-2.1052	-0.00098682	2.1156	0.00099169	0.010372	4.8619E-06	468.749387678244	39.292	0.71391	39.303	39.018	39.732	0.011173					33	16	3	0	0	0	0.68711	1	2756	2756		41.427	5.8083	1	155110			10693	8079	7520	7528	12227	12227					0.012157300948956618
GGGYTIRNV	9	Unmodified	_GGGYTIRNV_					0	0	0		nc|ENSG00000196591|Q92769-3|HDAC2;ENSG00000196591|ENST00000519065|HDAC2;chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1;ENSG00000116478|ENST00000373548|HDAC1	nc|ENSG00000196591|Q92769-3|HDAC2	nc|ENSG00000196591|Q92769-3|HDAC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	468.748516	935.482479	0.21753	0.00010197	0.050552	2.3696E-05	0.26808	0.00012566	468.748417866389	39.249	0.49424	39.337	39.076	39.57	0.088371	0.038569	-0.00089373	NaN	63.534	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103600			10694	8079	7520	7528							0.012157300948956618
GGGYTIRNV	9	Unmodified	_GGGYTIRNV_					0	0	0		nc|ENSG00000196591|Q92769-3|HDAC2;ENSG00000196591|ENST00000519065|HDAC2;chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1;ENSG00000116478|ENST00000373548|HDAC1	nc|ENSG00000196591|Q92769-3|HDAC2	nc|ENSG00000196591|Q92769-3|HDAC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	468.748516	935.482479	0.015627	7.325E-06	-0.036052	-1.6899E-05	-0.020425	-9.5743E-06	468.74838293734325	39.284	0.49775	39.232	39.001	39.499	-0.052731	-0.066738	-0.00097492	NaN	63.534	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	117020			10695	8079	7520	7528							0.012157300948956618
GGGYTIRNV	9	Unmodified	_GGGYTIRNV_					0	0	0		nc|ENSG00000196591|Q92769-3|HDAC2;ENSG00000196591|ENST00000519065|HDAC2;chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1;ENSG00000116478|ENST00000373548|HDAC1	nc|ENSG00000196591|Q92769-3|HDAC2	nc|ENSG00000196591|Q92769-3|HDAC2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	468.748516	935.482479	-1.5319	-0.00071809	1.3193	0.00061842	-0.21262	-9.9666E-05	468.7492345191234	38.796	0.68579	39.35	39.236	39.922	0.55449	0.052054	0.00029572	NaN	63.534	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139090			10696	8079	7520	7528							0.012157300948956618
GGHGHHLEP	9	Unmodified	_GGHGHHLEP_					0	0	0			REV__ENST00000327483.9_1_16:88947150-88949114:-|nuORF	REV__ENST00000327483.9_1_16:88947150-88949114:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7217712402344	2	470.722833	939.431112	-1.9255	-0.0009064	0.69694	0.00032806	-1.2286	-0.00057833	470.7230496849371	30.862	0.5553	30.862	30.616	31.171	0					26	18	2	0	0	0	0.69914	1	1435	1435		40.573	1.3198	1	71143	+		10697	25089	7521	7529	12228	12228					-0.04102593879156302
GGHRSLVN	8	Unmodified	_GGHRSLVN_					0	0	0		ENSG00000075213|ENST00000265362|SEMA3A	ENSG00000075213|ENST00000265362|SEMA3A	ENSG00000075213|ENST00000265362|SEMA3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.22796630859375	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.87922	1	7670	7670		31.955	1.4512	1	831720			10698	1322	7522	7530	12229	12229					0.015265941262214255
GGHTFVPIL	9	Unmodified	_GGHTFVPIL_					0	0	0			REV__ENST00000379887.8_2_15:72877639-72878143:+|nuORF	REV__ENST00000379887.8_2_15:72877639-72878143:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.767578125	2	470.766178	939.517802	-1.9239	-0.00090572	1.9879	0.00093583	0.06397	3.0115E-05	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.58151	1	1458	1458		47.916	3.7988	1	93177	+		10699	25930	7523	7531	12230	12230					0.04562392622710831
GGICRRSLLA	10	Unmodified	_GGICRRSLLA_					0	0	0		ENST00000266263.9_1_22:30821683-30821746:+|nuORF	ENST00000266263.9_1_22:30821683-30821746:+|nuORF	ENST00000266263.9_1_22:30821683-30821746:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3037719726562	2	523.300393	1044.58623	2.4529	0.0012836	3.9693	0.0020771	6.4222	0.0033607	523.3023390872137	100.93	0.87259	101.28	100.69	101.57	0.34591					58	22	4	0	0	0	0.82886	1	12297	12297		37.812	3.8899	1	1240700			10700	9520	7524	7532	12231	12231					0.0657231393092843
GGIFILHGN	9	Unmodified	_GGIFILHGN_					0	0	0		nc|ENSG00000151233|Q4G148-2|GXYLT1;ENSG00000151233|ENST00000398675|GXYLT1	nc|ENSG00000151233|Q4G148-2|GXYLT1	nc|ENSG00000151233|Q4G148-2|GXYLT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25384521484375	2	464.255977	926.497401	-1.0566	-0.00049054	-3.1539	-0.0014642	-4.2105	-0.0019547	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.74721	1	8088	8088		37.159	8.9048	1	1603800			10701	5102	7525	7533	12232	12232					0.031212219629082938
GGIVGMTLPI	10	Unmodified	_GGIVGMTLPI_					0	0	0		nc|ENSG00000072506|Q99714-2|HSD17B10;ENSG00000072506|ENST00000168216|HSD17B10	nc|ENSG00000072506|Q99714-2|HSD17B10	nc|ENSG00000072506|Q99714-2|HSD17B10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27789306640625	2	479.275521	956.536489	0.53004	0.00025403	3.2196	0.0015431	3.7496	0.0017971	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.8608	1	8200	8200		34.173	1.422	1	2070000			10702	1277	7526	7534	12233	12233					0.05648186202256511
GGIVGMTLPI	10	Unmodified	_GGIVGMTLPI_					0	0	0		nc|ENSG00000072506|Q99714-2|HSD17B10;ENSG00000072506|ENST00000168216|HSD17B10	nc|ENSG00000072506|Q99714-2|HSD17B10	nc|ENSG00000072506|Q99714-2|HSD17B10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27691650390625	2	479.275521	956.536489	0.63867	0.0003061	3.2635	0.0015641	3.9021	0.0018702	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.67608	1	8650	8650		45.952	3.0877	1	6593200			10703	1277	7526	7534	12234	12234					0.05648186202256511
GGIVGMTLPI	10	Unmodified	_GGIVGMTLPI_					0	0	0		nc|ENSG00000072506|Q99714-2|HSD17B10;ENSG00000072506|ENST00000168216|HSD17B10	nc|ENSG00000072506|Q99714-2|HSD17B10	nc|ENSG00000072506|Q99714-2|HSD17B10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27764892578125	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.50394	2	10052	10030;10052		55.504	2.1528	1	5642300			10704	1277	7526	7534	12235;12236	12236					0.05648186202256511
GGIVLIIK	8	Unmodified	_GGIVLIIK_					0	0	0			REV__nc|ENSG00000154027|Q9Y6K8-3|AK5	REV__nc|ENSG00000154027|Q9Y6K8-3|AK5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7853698730469	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.81548	1	1697	1697		20.482	6.7065	1	1965300	+		10705	20366	7527	7535	12237	12237					0.1398105515052066
GGIVRSGTH	9	Unmodified	_GGIVRSGTH_					0	0	0		CON__ENSEMBL:ENSBTAP00000024146	CON__ENSEMBL:ENSBTAP00000024146	CON__ENSEMBL:ENSBTAP00000024146	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.24078369140625	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.62081	1	8023	8023		45.952	1.8352	1	1068200		+	10706	568	7528	7536	12238	12238					0.021228632976999506
GGIVRSGTH	9	Unmodified	_GGIVRSGTH_					0	0	0		CON__ENSEMBL:ENSBTAP00000024146	CON__ENSEMBL:ENSBTAP00000024146	CON__ENSEMBL:ENSBTAP00000024146	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2408447265625	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.78058	1	8242	8242		30.504	0	1	1238700		+	10707	568	7528	7536	12239	12239					0.021228632976999506
GGIVRSGTH	9	Unmodified	_GGIVRSGTH_					0	0	0		CON__ENSEMBL:ENSBTAP00000024146	CON__ENSEMBL:ENSBTAP00000024146	CON__ENSEMBL:ENSBTAP00000024146	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.24072265625	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.74721	1	7758	7758		37.159	1.5408	1	1219900		+	10708	568	7528	7536	12240	12240					0.021228632976999506
GGKADSLLEDI	11	Unmodified	_GGKADSLLEDI_					0	0	0		nc|ENSG00000101311|Q9BQL6-4|FERMT1;nc|ENSG00000101311|Q9BQL6-2|FERMT1;ENSG00000101311|ENST00000217289|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2908325195312	2	559.290411	1116.56627	0.48967	0.00027387	-0.77532	-0.00043363	-0.28565	-0.00015976	559.2900526706036	31.655	0.46802	31.762	31.505	31.973	0.10707					22	10	3	0	0	0	0.48529	1	2189	2189		52.937	4.3351	1	186460			10709	14821	7529	7537	12241	12241					0.012647966812892264
GGKGGAAG	8	Unmodified	_GGKGGAAG_					0	0	0			REV__ENSG00000171094|ENST00000389048|ALK	REV__ENSG00000171094|ENST00000389048|ALK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.3150024414062	1	574.29435	573.287074	-0.55742	-0.00032012	-3.5289	-0.0020266	-4.0863	-0.0023467	574.2927833659635	49.496	0.44815	49.956	49.707	50.155	0.45983					14	10	2	0	0	0	0.4196	1	4843	4843		4.3163	0	1	243020	+		10710	21709	7530	7538	12242	12242					-0.016638156392900783
GGKIWKVRLP	10	Unmodified	_GGKIWKVRLP_					0	0	0			REV__SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|24|2|sense	REV__SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|24|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.36669921875	2	577.36385	1152.71315	3.0575	0.0017653	1.3884	0.0008016	4.4459	0.0025669	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.85958	1	11304	11304		15.642	1.5047	1	11111000	+		10711	15532	7531	7539	12243	12243					0.14289983147546081
GGKKGGGA	8	Unmodified	_GGKKGGGA_					0	0	0			REV__ENSG00000109061|ENST00000226207|MYH1	REV__ENSG00000109061|ENST00000226207|MYH1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	631.3546752929688	1	631.3522	630.344923	-0.46418	-0.00029306	2.7626	0.0017442	2.2984	0.0014511	631.3537369862183	73.136	3.2404	73.136	71.37	74.611	0					364	144	4	0	0	0	0.86906	1	6406	6406		8.2313	0.54101	1	20843000	+		10712	17743	7532	7540	12244	12244					0.01496446286137143
GGKKNRRIF	9	Unmodified	_GGKKNRRIF_					0	0	0		nc|ENSG00000011143|Q9NXB0-2|MKS1;nc|ENSG00000011143|Q9NXB0-3|MKS1;ENSG00000011143|ENST00000393119|MKS1	nc|ENSG00000011143|Q9NXB0-2|MKS1	nc|ENSG00000011143|Q9NXB0-2|MKS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3168334960938	2	538.327799	1074.64105	1.8602	0.0010014	-3.4699	-0.001868	-1.6098	-0.00086659	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.74721	1	12415	12415		37.159	1.5408	1	19391000			10713	782	7533	7541	12245	12245					0.1067106879381754
GGKKVRKK	8	Unmodified	_GGKKVRKK_					0	0	0		nc|ENSG00000129990|O00445-2|SYT5;ENSG00000129990|ENST00000354308|SYT5	nc|ENSG00000129990|O00445-2|SYT5	nc|ENSG00000129990|O00445-2|SYT5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2742919921875	2	450.808711	899.602869	1.3017	0.00058682	-1.8317	-0.00082575	-0.52999	-0.00023892	450.8085694289616	92.852	0.20374	92.898	92.754	92.958	0.045448					6	4	2	0	0	0	0.4196	1	9701	9701		3.6843	0	1	31758			10714	3613	7534	7542	12246	12246					0.1490518287918121
GGKNKKHK	8	Unmodified	_GGKNKKHK_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.7716979980469	2	448.774868	895.535184	0.21176	9.5034E-05	3.8418	0.0017241	4.0536	0.0018192	448.7764318361709	40.896	1.1217	40.978	40.553	41.675	0.081345					59	36	2	0	0	0	0.92457	1	2611	2611		47.916	9.1095	1	280070			10715	1181	7535	7543	12247	12247					0.08323732948372253
GGKNKKHK	8	Unmodified	_GGKNKKHK_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.7727355957031	2	448.774868	895.535184	-0.1121	-5.0308E-05	4.2929	0.0019266	4.1808	0.0018763	448.77666554386593	40.996	1.3045	40.951	40.614	41.918	-0.045471					57	40	2	0	0	0	0.87922	1	2647	2647		31.955	1.4512	1	307540			10716	1181	7535	7543	12248	12248					0.08323732948372253
GGKRKKSA	8	Unmodified	_GGKRKKSA_					0	0	0		ENST00000578036.5_1_17:62801160-62825332:-|nuORF;ENST00000584585.1_1_17:62817020-62825332:-|nuORF;ENST00000580919.5_1_17:62811233-62825332:-|nuORF;ENST00000397718.8_1_17:62816508-62825332:-|nuORF;ENSG00000225190|ENST00000430334|PLEKHM1	ENST00000578036.5_1_17:62801160-62825332:-|nuORF;ENSG00000225190|ENST00000430334|PLEKHM1	ENST00000578036.5_1_17:62801160-62825332:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.26446533203125	2	416.261594	830.508634	0.87227	0.00036309	2.2844	0.00095089	3.1566	0.001314	416.2624474382271	50.189	0.69551	51.034	50.641	51.336	0.84501					21	16	2	0	0	0	0.83058	1	4947	4947		12.959	0.75233	1	808350			10717	11159;8705	7536	7544	12249	12249					0.08660044057035066
GGKRLIII	8	Unmodified	_GGKRLIII_					0	0	0		nc|ENSG00000148690|Q70Z53-3|FRA10AC1	nc|ENSG00000148690|Q70Z53-3|FRA10AC1	nc|ENSG00000148690|Q70Z53-3|FRA10AC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3002014160156	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.83058	1	6979	6979		12.959	3.4886	1	1680500			10718	14985	7537	7545	12250	12250					0.14627262273381803
GGKRLTNGK	9	Unmodified	_GGKRLTNGK_					0	0	0			REV__ENST00000489569.1_1_3:50327922-50329822:-|nuORF	REV__ENST00000489569.1_1_3:50327922-50329822:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77728271484375	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.76	1	79.891	79.391	80.391	0.13086								0	0	0	0.31117	1	7575	7575		26.693	2.4902	1		+		10719	23660	7538	7546	12251	12251					0.07307411740180214
GGKRPKKIH	9	Unmodified	_GGKRPKKIH_					0	0	0		ENSG00000165572|ENST00000379485|KBTBD6	ENSG00000165572|ENST00000379485|KBTBD6	ENSG00000165572|ENST00000379485|KBTBD6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.33197021484375	2	510.824892	1019.63523	0.09199	4.6991E-05	0.078641	4.0172E-05	0.17063	8.7163E-05	510.8245577384575	17.892	0.38198	17.954	17.845	18.227	0.062601					40	20	3	0	0	0	0.20789	1	290	290		17.365	0	1	248690			10720	6097	7539	7547	12252	12252					0.12619970282173654
GGKSPQTYE	9	Unmodified	_GGKSPQTYE_					0	0	0		chr18:79977701-79995286|21|35.0|0.26|7.06|-|2|TE_info:PRIMA4-int,PRIMA4-int_dup355,ERV1,LTR,donor,+,79995286,79995820|TXNL4A,None|1	chr18:79977701-79995286|21|35.0|0.26|7.06|-|2|TE_info:PRIMA4-int,PRIMA4-int_dup355,ERV1,LTR,donor,+,79995286,79995820|TXNL4A,None|1	chr18:79977701-79995286|21|35.0|0.26|7.06|-|2|TE_info:PRIMA4-int,PRIMA4-int_dup355,ERV1,LTR,donor,+,79995286,79995820|TXNL4A,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7287292480469	2	483.729989	965.445425	-0.76587	-0.00037047	-1.8588	-0.00089915	-2.6247	-0.0012696	483.72888486758	72.257	0.87394	72.643	72.125	72.999	0.38581					43	20	3	0	0	0	0.67345	1	8082	8082		42.396	0	1	1359000			10721	259	7540	7548	12253	12253					-0.03867986241516519
GGKTKATH	8	Unmodified	_GGKTKATH_					0	0	0		nc|ENSG00000156113|Q12791-6|KCNMA1	nc|ENSG00000156113|Q12791-6|KCNMA1	nc|ENSG00000156113|Q12791-6|KCNMA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2255859375	2	400.224677	798.434801	-0.24227	-9.6962E-05	3.1489	0.0012602	2.9066	0.0011633	400.22586635628164	40.347	1.7799	40.299	40.01	41.79	-0.04789					125	60	3	0	0	0	0.89494	1	2548	2548		37.159	3.6661	1	1238600			10722	15011	7541	7549	12254	12254					0.027520758947048307
GGKVTKTI	8	Unmodified	_GGKVTKTI_					0	0	0			REV__ENSG00000082397|ENST00000341928|EPB41L3;REV__nc|ENSG00000159023|P11171-6|EPB41	REV__ENSG00000082397|ENST00000341928|EPB41L3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.253173828125	2	402.252903	802.491253	0.012696	5.1069E-06	-0.76035	-0.00030585	-0.74765	-0.00030074	402.25244995223795	19.772	0.32962	19.843	19.703	20.032	0.070711					25	15	2	0	0	0	0.80706	1	445	445		19.36	1.995	1	128880	+		10723	16839;20632	7542	7550	12255	12255					0.08210703731378999
GGKYVFVAP	9	Unmodified	_GGKYVFVAP_					0	0	0			REV__nc|ENSG00000112763|Q7KYR7-6|BTN2A1	REV__nc|ENSG00000112763|Q7KYR7-6|BTN2A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	469.2592468261719	2	469.260728	936.506903	-0.28782	-0.00013506	-3.6569	-0.0017161	-3.9447	-0.0018511	469.25892183391403	25.64	0.64706	25.599	25.332	25.979	-0.04117					41	17	3	0	0	0	0.77546	1	1116	1116		31.955	1.4512	1	153890	+		10724	17964	7543	7551	12256	12256					0.03610990248421331
GGLAQGFLRET	11	Unmodified	_GGLAQGFLRET_					0	0	0			REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF	REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.806640625	2	574.806562	1147.59857	-0.26346	-0.00015144	0.47146	0.000271	0.208	0.00011956	574.8065326924051	34.066	0.74987	34.009	33.651	34.401	-0.056385					37	16	3	0	0	0	0.61369	1	2131	2131		42.864	2.0861	1	189990	+		10725	27791	7544	7552	12257	12257					0.030676288749418745
GGLCAAPHS	9	Unmodified	_GGLCAAPHS_					0	0	0		ENST00000589223.5_1_19:2111584-2111854:-|nuORF	ENST00000589223.5_1_19:2111584-2111854:-|nuORF	ENST00000589223.5_1_19:2111584-2111854:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25665283203125	2	406.689613	811.364672	-0.78248	-0.00031822	1.6097	0.00065465	0.82722	0.00033642	406.690371217444	55.812	0.10741	55.775	55.679	55.786	-0.036827					6	4	2	0	0	0	0.20789	1	4695	4695		40.573	5.3719	1	27960			10726	14233	7545	7553	12258	12258					-0.04855545765417446
GGLDMGPRLH	10	Unmodified	_GGLDMGPRLH_					0	0	0		ENST00000528737.5_1_11:58912814-58912868:+|nuORF	ENST00000528737.5_1_11:58912814-58912868:+|nuORF	ENST00000528737.5_1_11:58912814-58912868:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8084716796875	2	526.768926	1051.5233	2.408	0.0012685	-2.658	-0.0014001	-0.24996	-0.00013167	526.7683266313466	100.46	0.64546	100.81	100.53	101.18	0.34591					26	15	3	0	0	0	0.37624	1	12210	12210		66.429	0	1	166850			10727	13310	7546	7554	12259	12259					-0.0004025185712634993
GGLGFRKLF	9	Unmodified	_GGLGFRKLF_					0	0	0		ENSG00000158683|ENST00000289672|PKD1L1;nc|ENSG00000158683|Q8TDX9-2|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.7948913574219	2	497.795269	993.575986	-0.62467	-0.00031096	1.8609	0.00092635	1.2362	0.0006154	497.7959443257759	48.896	1.0734	48.921	48.637	49.71	0.025574					60	26	3	0	0	0	0.7932	1	3745	3745		26.796	1.3459	1	414050			10728	5492	7547	7555	12260	12260					0.07894074267983342
GGLGGLGRR	9	Unmodified	_GGLGGLGRR_					0	0	0		ENST00000280614.3_1_4:139937158-139964261:+|nuORF	ENST00000280614.3_1_4:139937158-139964261:+|nuORF	ENST00000280614.3_1_4:139937158-139964261:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75177001953125	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.7932	1	7514	7514		25.45	0	1	532850			10729	9622	7548	7556	12261	12261					0.061148733972345326
GGLGSPTFNS	10	Unmodified	_GGLGSPTFNS_					0	0	0		nc|ENSG00000156860|Q9HAH7-1|FBRS;nc|ENSG00000156860|Q9HAH7|FBRS;ENSG00000156860|ENST00000356166|FBRS	nc|ENSG00000156860|Q9HAH7-1|FBRS;ENSG00000156860|ENST00000356166|FBRS	ENSG00000156860|ENST00000356166|FBRS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.72332763671875	2	468.724707	935.43486	-1.2296	-0.00057635	-1.9244	-0.000902	-3.154	-0.0014784	468.7238369987016	86.792	1.5636	87.247	86.655	88.219	0.4543					99	37	4	0	0	0	0.86471	1	10229	10229		30.318	0.47618	1	4103600			10730	15018;5396	7549	7557	12262	12262					-0.03543968895951366
GGLGVRQR	8	Unmodified	_GGLGVRQR_					0	0	0		ENST00000437198.6_1_16:14529576-14529846:-|nuORF	ENST00000437198.6_1_16:14529576-14529846:-|nuORF	ENST00000437198.6_1_16:14529576-14529846:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.751708984375	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.442	1	76.532	76.032	77.032	0.089363								0	0	0	0.29755	1	7121	7121		24.203	0	1				10731	11734	7550	7558	12263	12263					0.061148733972345326
GGLIILEP	8	Unmodified	_GGLIILEP_					0	0	0		nc|ENSG00000166387|Q8ND30-3|PPFIBP2;nc|ENSG00000166387|Q8ND30-2|PPFIBP2;ENSG00000166387|ENST00000299492|PPFIBP2	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2460021972656	2	406.249829	810.485105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.24	1	117.16	116.66	117.66	-0.082458								0	0	0	0.29353	1	12613	12613		28.254	1.4582	1				10732	6187	7551	7559	12264	12264					0.07228185499843676
GGLLKLLR	8	Unmodified	_GGLLKLLR_					0	0	0			REV__ENST00000587109.5_1_17:42422768-42422951:+|nuORF	REV__ENST00000587109.5_1_17:42422768-42422951:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2998046875	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.86288	1	8196	8196		26.796	0	1	5485100	+		10733	29123	7552	7560	12265	12265					0.14627262273370434
GGLPRKQSA	9	Unmodified	_GGLPRKQSA_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2638854980469	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.72402	1	7771	7771		38.806	1.647	1	2957200	+		10734	16914	7553	7561	12266	12266					0.05435722848858404
GGLQLTAIT	9	Unmodified	_GGLQLTAIT_					0	0	0			REV__ENSG00000004399|ENST00000324093|PLXND1	REV__ENSG00000004399|ENST00000324093|PLXND1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7712097167969	2	437.255643	872.496732	0.26988	0.00011801	0.63244	0.00027654	0.90232	0.00039455	437.2555480339631	36.295	0.85876	36.576	36.152	37.011	0.28173					31	20	2	0	0	0	0.20789	1	2887	2887		42.396	21.914	1	114400	+		10735	16057	7554	7562	12267	12267					0.055383825231729134
GGLRPLQC	8	Unmodified	_GGLRPLQC_					0	0	0			REV__ENST00000470888.6_1_1:65613614-65614002:+|nuORF	REV__ENST00000470888.6_1_1:65613614-65614002:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.227294921875	2	422.228905	842.443257	1.5461	0.00065279	-3.6515	-0.0015418	-2.1055	-0.00088899	422.22724496849196	56.714	2.4167	56.747	56.356	58.772	0.033184					164	84	3	0	0	0	0.86288	1	5117	5117		26.796	3.7594	1	1096200	+		10736	27221	7555	7563	12268	12268					0.015733065396716484
GGLRPLQC	8	Unmodified	_GGLRPLQC_					0	0	0			REV__ENST00000470888.6_1_1:65613614-65614002:+|nuORF	REV__ENST00000470888.6_1_1:65613614-65614002:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2284851074219	2	422.228905	842.443257	-1.8003	-0.00076015	-0.35926	-0.00015169	-2.1596	-0.00091184	422.2286994830419	63.649	0.63203	63.769	63.398	64.03	0.12004					57	31	2	0	0	0	0.79929	1	5596	5596		18.324	2.6882	1	224330	+		10737	27221	7555	7563	12269	12269					0.015733065396716484
GGLRPRVPRIT	11	Unmodified	_GGLRPRVPRIT_					0	0	0			REV__ENST00000556618.1_3_15:91500516-91500609:+|nuORF	REV__ENST00000556618.1_3_15:91500516-91500609:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	407.28692626953125	3	407.922801	1220.74657	1.6075	0.00065574	-0.6674	-0.00027225	0.9401	0.00038349	408.2572183673781	64.519	0.1943	64.546	64.439	64.634	0.027138					6	4	2	0	0	0	0.17521	1	6070	6070		22.562	5.3948	1	26738	+		10738	28703	7556	7564	12270	12270					0.14502984919431583
GGLRSRLP	8	Unmodified	_GGLRSRLP_					0	0	0		ENST00000486847.2_1_19:12774617-12777525:-|nuORF	ENST00000486847.2_1_19:12774617-12777525:-|nuORF	ENST00000486847.2_1_19:12774617-12777525:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.261474609375	2	428.261594	854.508634	1.4286	0.0006118	-1.267	-0.00054261	0.16155	6.9187E-05	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.87479	1	9487	9487		30.504	0	1	57042000			10739	12589	7557	7565	12271	12271					0.07556044057025701
GGLSLVVNVM	10	Unmodified	_GGLSLVVNVM_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7799072265625	2	494.778428	987.542302	-0.075058	-3.7137E-05	3.6992	0.0018303	3.6241	0.0017931	494.7801083626478	84.098	2.6315	84.165	82.573	85.204	0.067001					119	60	3	0	0	0	0.77314	1	8324	8324		40.778	0	1	230560			10740	5684	7558	7566	12272	12272					0.0480328471392113
GGLVAARVGSA	11	Unmodified	_GGLVAARVGSA_					0	0	0		ENST00000498406.1_1_22:21355751-21355970:-|nuORF	ENST00000498406.1_1_22:21355751-21355970:-|nuORF	ENST00000498406.1_1_22:21355751-21355970:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2782287597656	2	479.277441	956.540328	-0.72512	-0.00034753	0.71589	0.00034311	-0.0092246	-4.4211E-06	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.68532	1	9529	9529		33.922	2.3918	1	1822400			10741	12826	7559	7567	12273	12273					0.060319920203255606
GGLVAARVGSA	11	Unmodified	_GGLVAARVGSA_					0	0	0		ENST00000498406.1_1_22:21355751-21355970:-|nuORF	ENST00000498406.1_1_22:21355751-21355970:-|nuORF	ENST00000498406.1_1_22:21355751-21355970:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2775573730469	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.61369	1	9941	9941		42.864	0.46813	1	6350300			10742	12826	7559	7567	12274	12274					0.060319920203255606
GGLVKKWVD	9	Unmodified	_GGLVKKWVD_					0	0	0			REV__ENSG00000166189|ENST00000299238|HPS6	REV__ENSG00000166189|ENST00000299238|HPS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2904052734375	2	501.292559	1000.57057	-0.50311	-0.0002522	-3.7566	-0.0018832	-4.2597	-0.0021354	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.74721	1	8632	8632		37.159	0	1	10459000	+		10743	21265	7560	7568	12275	12275					0.07030350685511166
GGLVKKWVD	9	Unmodified	_GGLVKKWVD_					0	0	0			REV__ENSG00000166189|ENST00000299238|HPS6	REV__ENSG00000166189|ENST00000299238|HPS6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2902526855469	2	501.292559	1000.57057	0.16565	8.304E-05	-4.0766	-0.0020436	-3.911	-0.0019605	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.51307	2	9797	9797;9884		51.335	17.163	1	2717900	+		10744	21265	7560	7568	12276;12277	12276					0.07030350685511166
GGLVKLRWP	9	Unmodified	_GGLVKLRWP_					0	0	0			REV__nc|ENSG00000129673|Q16613-2|AANAT	REV__nc|ENSG00000129673|Q16613-2|AANAT	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8186645507812	2	513.316369	1024.61818	-1.3651	-0.00070072	2.2159	0.0011375	0.85085	0.00043675	513.3175456130648	53.876	2.1608	53.876	52.509	54.67	0					97	64	3	0	0	0	0.77546	1	4543	4543		31.955	2.8053	1	276500	+		10745	29836	7561	7569	12278	12278					0.10686049676337461
GGLVKLRWP	9	Unmodified	_GGLVKLRWP_					0	0	0			REV__nc|ENSG00000129673|Q16613-2|AANAT	REV__nc|ENSG00000129673|Q16613-2|AANAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3176879882812	2	513.316369	1024.61818	-0.40505	-0.00020792	0.74317	0.00038148	0.33811	0.00017356	513.3166290585863	43.201	1.1169	43.206	42.933	44.05	0.0057487					65	27	3	0	0	0	0.7932	1	2957	2957		25.45	1.2474	1	350060	+		10746	29836	7561	7569	12279	12279					0.10686049676337461
GGLVLLLPET	10	Unmodified	_GGLVLLLPET_					0	0	0		ENST00000486916.5_1_6:160592405-160666544:-|nuORF;ENSG00000112499|ENST00000366953|SLC22A2	ENST00000486916.5_1_6:160592405-160666544:-|nuORF	ENST00000486916.5_1_6:160592405-160666544:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3058166503906	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.596	1	50.646	50.146	51.146	0.049896								0	0	0	0.45132	1	3987	3987		30.504	5.0535	1				10747	2666	7562	7570	12280	12280					0.09632084279917308
GGLVRARN	8	Unmodified	_GGLVRARN_					0	0	0			REV__nc|ENSG00000101605|P52179-2|MYOM1	REV__nc|ENSG00000101605|P52179-2|MYOM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75128173828125	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.86288	1	7435	7435		26.796	5.0938	1	532850	+		10748	17291	7563	7571	12281	12281					0.06114873397223164
GGMKRHLSYT	10	Unmodified	_GGMKRHLSYT_					0	0	0			REV__nc|ENSG00000163050|Q8NI60-2|COQ8A	REV__nc|ENSG00000163050|Q8NI60-2|COQ8A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.299072265625	2	575.295307	1148.57606	-0.68022	-0.00039132	3.9305	0.0022612	3.2502	0.0018698	575.2974888485829	42.739	0.6573	42.739	42.41	43.067	0.00016785					36	15	3	0	0	0	0.80179	1	3211	3211		39.253	6.5023	1	252980	+		10749	20875	7564	7572	12282	12282					0.007717062056826762
GGPAFLQN	8	Unmodified	_GGPAFLQN_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.205322265625	2	402.205953	802.397353	-0.18632	-7.4938E-05	-0.51168	-0.0002058	-0.698	-0.00028074	402.20569515988933	98.659	2.0984	98.708	97.873	99.972	0.04982					129	48	4	0	0	0	0.92973	1	10420	10420		50.025	9.4519	1	1555200	+		10750	18072	7565	7573	12283	12283					-0.011750153709044753
GGPAGGHGGNR	11	Unmodified	_GGPAGGHGGNR_					0	0	0		nc|ENSG00000174953|Q9H2U1-3|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;ENSG00000174953|ENST00000496811|DHX36	nc|ENSG00000174953|Q9H2U1-3|DHX36	nc|ENSG00000174953|Q9H2U1-3|DHX36	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.7222595214844	2	468.723364	935.432175	-1.0822	-0.00050726	0.86857	0.00040712	-0.21364	-0.00010014	468.7236147293877	70.106	0.76979	70.177	69.93	70.7	0.071037					66	37	3	0	0	0	0.68378	1	6332	6332		34.173	5.023	1	1251800			10751	6978	7566	7574	12284	12284					-0.03812379510247865
GGPARKLL	8	Unmodified	_GGPARKLL_					0	0	0			REV__chr19:1854760-1859270|40|55.05|0.78|6.15|-|0|KLF16,None|1	REV__chr19:1854760-1859270|40|55.05|0.78|6.15|-|0|KLF16,None|1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2486267089844	2	406.261062	810.507572	-1.1735	-0.00047676	1.7506	0.00071122	0.57711	0.00023446	406.261609560513	88.651	0.37057	88.651	88.38	88.751	0					18	8	3	0	0	0	0.4196	1	8544	8544		13.775	4.953	1	379800	+		10752	15689	7567	7575	12285	12285					0.09473829688124624
GGPAWRLL	8	Unmodified	_GGPAWRLL_					0	0	0			REV__ENST00000357578.7_2_6:24495232-24502797:+|nuORF	REV__ENST00000357578.7_2_6:24495232-24502797:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2522888183594	2	435.253237	868.491922	-0.16621	-7.2343E-05	-4.2181	-0.0018359	-4.3843	-0.0019083	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.87276	1	7444	7444		29.842	1.5873	1	768200	+		10753	25414	7568	7576	12286	12286					0.0524154317108696
GGPGGGGAPPR	11	Unmodified	_GGPGGGGAPPR_					0	0	0		ENSG00000180340|ENST00000315323|FZD2	ENSG00000180340|ENST00000315323|FZD2	ENSG00000180340|ENST00000315323|FZD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2251281738281	2	440.225208	878.435863	-0.39047	-0.00017189	0.4956	0.00021818	0.10513	4.6282E-05	440.2253113144555	16.926	0.22956	16.847	16.752	16.982	-0.079056					14	7	3	0	0	0	0.60283	1	172	172		44.117	3.5442	1	94665			10754	7326	7569	7577	12287	12287					-0.008217097363854009
GGPGGREDH	9	Unmodified	_GGPGGREDH_					0	0	0			REV__ENST00000379974.1_1_10:5995060-6019797:-|nuORF	REV__ENST00000379974.1_1_10:5995060-6019797:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.1943359375	2	441.196648	880.378742	1.0902	0.00048098	-1.9768	-0.00087216	-0.88662	-0.00039117	441.1960280174818	97.831	1.1968	98.217	97.723	98.92	0.38548					53	28	3	0	0	0	0.69914	1	11762	11762		40.573	0	1	469230	+		10755	25934	7570	7578	12288	12288					-0.06623177012772885
GGPGQTPIPH	10	Unmodified	_GGPGQTPIPH_					0	0	0			REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000127616|P51532-5|SMARCA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.7501220703125	2	480.748516	959.482479	0.11514	5.5353E-05	-0.71275	-0.00034265	-0.59761	-0.0002873	480.7485774338056	32.415	0.37289	32.426	32.191	32.564	0.010902					16	10	2	0	0	0	0.73395	1	1801	1801		42.864	4.0581	1	35174	+		10756	18744	7571	7579	12289	12289					0.0011173009490903496
GGPIHIKFK	9	Unmodified	_GGPIHIKFK_					0	0	0			REV__nc|ENSG00000132394|P57772-2|EEFSEC	REV__nc|ENSG00000132394|P57772-2|EEFSEC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8031311035156	2	498.803094	995.591636	-0.601	-0.00029978	1.7229	0.00085937	1.1219	0.00055959	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.7932	1	4494	4494		26.796	1.222	1	2240900	+		10757	19001	7572	7580	12290	12290					0.09366360785043071
GGPKCTHYI	9	Unmodified	_GGPKCTHYI_					0	0	0			REV__nc|ENSG00000292336|P46597-2|ASMT	REV__nc|ENSG00000292336|P46597-2|ASMT	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.2369689941406	2	488.23947	974.464386	-0.74174	-0.00036215	3.3278	0.0016248	2.5861	0.0012626	488.2425686893931	62.927	0.15952	63.041	62.915	63.074	0.11388					9	7	2	0	0	0	0.20789	1	5480	5480		44.117	0	1	31052	+		10758	23129	7573	7581	12291	12291					-0.023867281514753813
GGPPAPPPSA	10	Unmodified	_GGPPAPPPSA_					0	0	0			REV__ENST00000273062.6_1_2:219269262-219269553:+|nuORF	REV__ENST00000273062.6_1_2:219269262-219269553:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.218505859375	2	424.21906	846.423567	2.8621	0.0012142	-4.1607	-0.001765	-1.2985	-0.00055086	424.2172299005605	101.48	1.8959	101.53	100.85	102.75	0.044823					89	45	3	0	0	0	0.86452	1	10919	10919		30.504	2.2494	1	2047000	+		10759	24554	7574	7582	12292	12292					-0.005787461994373189
GGPPHVKL	8	Unmodified	_GGPPHVKL_					0	0	0		nc|ENSG00000154914|Q70EL4-4|USP43;ENSG00000154914|ENST00000285199|USP43;nc|ENSG00000154914|Q70EL4-3|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.7390441894531	2	402.739963	803.465373	-1.9023	-0.00076612	-0.36046	-0.00014517	-2.2627	-0.00091129	402.73969487917356	40.397	0.80037	40.404	40.114	40.914	0.0065041					72	28	4	0	0	0	0.81548	1	2533	2533		20.482	2.1574	1	562560			10760	5304	7575	7583	12293	12293					0.05577854279761141
GGPPRVVLLP	10	Unmodified	_GGPPRVVLLP_					0	0	0			REV__nc|ENSG00000164694|Q4ZHG4-2|FNDC1	REV__nc|ENSG00000164694|Q4ZHG4-2|FNDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	502.8140563964844	2	502.816202	1003.61785	-1.6058	-0.00080742	-3.4199	-0.0017196	-5.0257	-0.002527	502.81450830567076	97.159	3.8746	97.361	96.791	100.67	0.20206					232	89	5	0	0	0	0.86452	1	10072	10072		30.504	0	1	16341000	+		10761	21106	7576	7584	12294	12294					0.11618629956512905
GGPQCRAH	8	Unmodified	_GGPQCRAH_					0	0	0			REV__ENST00000467747.1_1_2:97526365-97527817:-|nuORF	REV__ENST00000467747.1_1_2:97526365-97527817:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.19384765625	2	413.192854	824.371155	0.36856	0.00015229	1.7456	0.00072126	2.1141	0.00087354	413.19353569569154	84.288	3.3037	84.723	83.664	86.967	0.43538					144	80	2	0	0	0	0.87276	1	9693	9693		29.842	1.5873	1	9340100	+		10762	21517	7577	7585	12295	12295					-0.04805607814034829
GGPQCRAH	8	Unmodified	_GGPQCRAH_					0	0	0			REV__ENST00000467747.1_1_2:97526365-97527817:-|nuORF	REV__ENST00000467747.1_1_2:97526365-97527817:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.193603515625	2	413.192854	824.371155	0.071072	2.9367E-05	0.71053	0.00029359	0.7816	0.00032295	413.19345857081765	82.462	1.3534	82.936	82.432	83.785	0.47383					89	32	5	0	0	0	0.92176	1	9606	9606		46.766	4.292	1	2653900	+		10763	21517	7577	7585	12296	12296					-0.04805607814034829
GGPRRPPA	8	Unmodified	_GGPRRPPA_					0	0	0			REV__ENST00000566104.1_1_16:67189803-67193780:-|nuORF	REV__ENST00000566104.1_1_16:67189803-67193780:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.23138427734375	2	404.232836	806.45112	2.8761	0.0011626	-2.4963	-0.0010091	0.37984	0.00015354	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.82464	1	8805	8805		21.702	1.2205	1	4761400	+		10764	28862	7578	7586	12297	12297					0.04015201851461825
GGPRRSLAS	9	Unmodified	_GGPRRSLAS_					0	0	0		ENST00000373779.7_2_1:29652185-29652539:+|nuORF	ENST00000373779.7_2_1:29652185-29652539:+|nuORF	ENST00000373779.7_2_1:29652185-29652539:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7546081542969	2	450.754133	899.493713	0.36741	0.00016561	0.13246	5.9707E-05	0.49987	0.00022532	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.71772	1	8442	8442		39.253	10.103	1	394230			10765	10757	7579	7587	12298	12298					0.03994552189044498
GGPRRSLAS	9	Unmodified	_GGPRRSLAS_					0	0	0		ENST00000373779.7_2_1:29652185-29652539:+|nuORF	ENST00000373779.7_2_1:29652185-29652539:+|nuORF	ENST00000373779.7_2_1:29652185-29652539:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.75482177734375	2	450.754133	899.493713	0.78548	0.00035406	-0.70514	-0.00031784	0.080345	3.6216E-05	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.73802	1	8123	8123		37.812	2.1932	1	420760			10766	10757	7579	7587	12299	12299					0.03994552189044498
GGPRRSLL	8	Unmodified	_GGPRRSLL_					0	0	0		ENST00000523259.5_1_5:139931458-139936810:-|nuORF;ENSG00000213523|ENST00000336283|SRA1	ENST00000523259.5_1_5:139931458-139936810:-|nuORF	ENST00000523259.5_1_5:139931458-139936810:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2614440917969	2	428.261594	854.508634	-1.8497	-0.00079216	1.9562	0.00083775	0.10645	4.5588E-05	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.87064	1	9191	9191		29.15	0.89528	1	31323000			10767	8592	7580	7588	12300	12300					0.07556044057048439
GGPVIPPLQRM	11	Unmodified	_GGPVIPPLQRM_					0	0	0			REV__ENST00000436365.1_1_X:47577979-47578291:-|nuORF	REV__ENST00000436365.1_1_X:47577979-47578291:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8333129882812	2	582.831526	1163.6485	-0.83199	-0.00048491	2.73	0.0015911	1.898	0.0011062	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.6921	1	9870	9870		32.812	3.6424	1	796430	+		10768	26690	7581	7589	12301	12301					0.07322040279223074
GGPVVLWL	8	Unmodified	_GGPVVLWL_					0	0	0			REV__nc|ENSG00000009694|Q9UKZ4-2|TENM1	REV__nc|ENSG00000009694|Q9UKZ4-2|TENM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.75469970703125	2	420.752539	839.490525	2.8224	0.0011875	3.6252	0.0015253	6.4476	0.0027129	420.75391516461383	21.105	1.6401	21.041	20.066	21.706	-0.064058					103	72	2	0	0	0	0.84567	1	545	545		24.504	7.799	1	85377	+		10769	16149	7582	7590	12302	12302					0.06435909082335911
GGQHWTYEGPH	11	Unmodified	_GGQHWTYEGPH_					0	0	0		ENSG00000118298|ENST00000369111|CA14;chr1:150257328-150258080|34|10.38|0.03|8.39|+|ENST00000647854|CA14,CA14	ENSG00000118298|ENST00000369111|CA14	ENSG00000118298|ENST00000369111|CA14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.7774658203125	2	634.775793	1267.53703	-0.0023067	-1.4642E-06	2.6271	0.0016676	2.6248	0.0016662	634.7774228738218	50.229	0.98591	50.226	49.624	50.609	-0.0030327					51	23	3	0	0	0	0.33869	1	4253	4253		64.207	7.7735	1	200210			10770	21	7583	7591	12303	12303					-0.08603302824349157
GGQVTELRKLN	11	Unmodified	_GGQVTELRKLN_					0	0	0			REV__ENSG00000184305|ENST00000509176|CCSER1	REV__ENSG00000184305|ENST00000509176|CCSER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.56304931640625	3	405.566571	1213.67788	-1.0529	-0.00042701	-3.3591	-0.0013624	-4.412	-0.0017894	405.5651485487608	63.261	1.4207	63.284	62.805	64.225	0.022984					129	62	3	0	0	0	0.75121	1	5543	5543		21.78	0.74819	1	264990	+		10771	22661	7584	7592	12304	12304					0.07959275829102808
GGRGGGIRL	9	Unmodified	_GGRGGGIRL_					0	0	0			REV__ENSG00000137310|ENST00000376257|TCF19	REV__ENSG00000137310|ENST00000376257|TCF19	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7514953613281	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.752	1	77.804	77.304	78.304	0.052696								0	0	0	0.32159	1	7531	7531		23.042	2.5607	1		+		10772	19377	7585	7593	12305	12305					0.06114873397223164
GGRGLREPV	9	Unmodified	_GGRGLREPV_					0	0	0		ENST00000573417.1_1_17:19281327-19285138:+|nuORF;ENST00000571657.5_1_17:19281216-19286541:+|nuORF	ENST00000573417.1_1_17:19281327-19285138:+|nuORF	ENST00000573417.1_1_17:19281327-19285138:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.76959228515625	2	470.769783	939.525013	-0.93673	-0.00044098	-0.76345	-0.00035941	-1.7002	-0.00080039	470.7692759714824	53.261	1.827	53.278	52.753	54.58	0.017487					126	54	3	0	0	0	0.48102	1	4645	4645		52.937	5.0211	1	1396300			10773	14002	7586	7594	12306	12306					0.052831252231385406
GGRIKLLL	8	Unmodified	_GGRIKLLL_					0	0	0			REV__ENSG00000173020|ENST00000308595|GRK2	REV__ENSG00000173020|ENST00000308595|GRK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.30029296875	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.82419	1	6575	6575		13.775	1.5685	1	1819800	+		10774	21880	7587	7595	12307	12307					0.14627262273359065
GGRKVLSR	8	Unmodified	_GGRKVLSR_					0	0	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.77117919921875	2	436.774868	871.535184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.465	1	27.465	26.965	27.965	0								0	0	0	0.2939	1	1100	1100		27.882	1.0861	1				10775	2636	7588	7596	12308	12308					0.09427732948370249
GGRLDRPV	8	Unmodified	_GGRLDRPV_					0	0	0			REV__chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	REV__chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2513427734375	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.89494	1	9240	9240		37.159	3.6435	1	2235800	+		10776	15950	7589	7597	12309	12309					0.04839453677379879
GGRPLIQP	8	Unmodified	_GGRPLIQP_					0	0	0		nc|ENSG00000176358|Q86UU9|TAC4;nc|ENSG00000176358|Q86UU9-3|TAC4;ENSG00000176358|ENST00000436235|TAC4	nc|ENSG00000176358|Q86UU9|TAC4	nc|ENSG00000176358|Q86UU9|TAC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2971496582031	2	419.250695	836.486836	0.033541	1.4062E-05	-1.8527	-0.00077675	-1.8192	-0.00076268	419.24929600211686	62.187	0.13068	62.741	62.646	62.777	0.55449					4	2	2	0	0	0	0.4196	1	6670	6670		26.796	6.3143	1	18034			10777	15112	7590	7598	12310	12310					0.06205239308462751
GGRRLPRQTG	10	Unmodified	_GGRRLPRQTG_					0	0	0			REV__ENST00000555704.5_1_14:50159830-50218487:+|nuORF	REV__ENST00000555704.5_1_14:50159830-50218487:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.3184814453125	2	549.317963	1096.62137	3.3171	0.0018221	-3.8331	-0.0021056	-0.51598	-0.00028344	549.3157779565678	101.02	2.3329	100.97	100.53	102.87	-0.052109					129	55	4	0	0	0	0.8651	1	11033	11033		25.574	2.0514	1	1991000	+		10778	28687	7591	7599	12311	12311					0.0769269278309821
GGRRRRRRENP	11	Unmodified	_GGRRRRRRENP_					0	0	0		ENST00000305123.5_1_2:227663922-227664009:-|nuORF	ENST00000305123.5_1_2:227663922-227664009:-|nuORF	ENST00000305123.5_1_2:227663922-227664009:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.9410400390625	3	470.606757	1408.79844	-0.61054	-0.00028732	0.15574	7.3291E-05	-0.4548	-0.00021403	470.6066946725842	56.942	0.80196	56.916	56.606	57.408	-0.026108					78	38	3	0	0	0	0.77205	1	4795	4795		17.167	2.4731	1	186620			10779	9846	7592	7600	12312	12312					0.11039541385957818
GGRRTRLL	8	Unmodified	_GGRRTRLL_					0	0	0		ENST00000479644.1_1_6:31939773-31940810:+|nuORF	ENST00000479644.1_1_6:31939773-31940810:+|nuORF	ENST00000479644.1_1_6:31939773-31940810:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7926940917969	2	464.793592	927.572632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.32	1	20.396	19.896	20.896	0.075848								0	0	0	0.29344	1	494	494		31.955	1.6371	1				10780	12412	7593	7601	12313	12313					0.10594824213978882
GGRSKSRRK	9	Unmodified	_GGRSKSRRK_					0	0	0			REV__nc|ENSG00000148219|O75129-3|ASTN2	REV__nc|ENSG00000148219|O75129-3|ASTN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3143310546875	2	516.312681	1030.61081	-1.5619	-0.00080641	4.1754	0.0021558	2.6135	0.0013494	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.77244	1	12697	12697		32.812	0.85756	1	4038100	+		10781	20103	7594	7602	12314	12314					0.09672710128643303
GGSACPAGST	10	Unmodified	_GGSACPAGST_					0	0	0		ENST00000418474.1_1_2:160472286-160472424:+|nuORF	ENST00000418474.1_1_2:160472286-160472424:+|nuORF	ENST00000418474.1_1_2:160472286-160472424:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.1705322265625	2	404.16871	806.322867	-1.318	-0.00053271	4.3696	0.0017661	3.0516	0.0012334	404.1707263168683	78.641	1.8199	78.641	78.235	80.055	0					146	66	5	0	0	0	0.86218	1	7248	7248		32.812	4.9302	1	3046600			10782	11423	7595	7603	12315	12315					-0.08804146244597177
GGSALLLYRL	10	Unmodified	_GGSALLLYRL_					0	0	0		ENST00000541059.5_1_11:67232701-67234745:-|nuORF	ENST00000541059.5_1_11:67232701-67234745:-|nuORF	ENST00000541059.5_1_11:67232701-67234745:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.816650390625	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.86348	1	8531	8531		31.53	3.6476	1	1159800			10783	13513	7596	7604	12316	12316					0.09498308748334239
GGSDMPLH	8	Unmodified	_GGSDMPLH_					0	0	0			REV__ENSG00000100219|ENST00000344347|XBP1	REV__ENSG00000100219|ENST00000344347|XBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.1837158203125	2	407.18162	812.348688	2.4545	0.00099941	1.62	0.00065963	4.0744	0.001659	407.1826090336494	96.976	1.3902	97.381	97.011	98.402	0.40498					85	33	5	0	0	0	0.89457	1	11651	11651		37.028	1.8278	1	3412500	+		10784	17154	7597	7605	12317	12317					-0.06499252002322464
GGSFFTDP	8	Unmodified	_GGSFFTDP_					0	0	0		nc|ENSG00000151079|P17658|KCNA6	nc|ENSG00000151079|P17658|KCNA6	nc|ENSG00000151079|P17658|KCNA6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.1828308105469	2	414.182143	826.349734	0.3849	0.00015942	1.0131	0.0004196	1.398	0.00057902	414.1829219864982	81.936	1.2856	82.362	81.962	83.248	0.42646					77	31	3	0	0	0	0.85277	1	9484	9484		25.45	0	1	2282100			10785	14989	7598	7606	12318	12318					-0.07038714361760867
GGSFIRKV	8	Unmodified	_GGSFIRKV_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2583312988281	2	432.25852	862.502486	0.40609	0.00017553	-1.8282	-0.00079027	-1.4221	-0.00061473	432.2575947247643	68.412	1.5069	68.797	68.224	69.731	0.38482					60	35	2	0	0	0	0.89962	1	7493	7493		38.806	5.3132	1	399210	+		10786	20128	7599	7607	12319	12319					0.06573525825513116
GGSFTKITTF	10	Unmodified	_GGSFTKITTF_					0	0	0			REV__nc|ENSG00000158792|Q8IUW3-2|SPATA2L	REV__nc|ENSG00000158792|Q8IUW3-2|SPATA2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.781494140625	2	529.779482	1057.54441	0.45896	0.00024315	2.7019	0.0014314	3.1609	0.0016746	529.7806261653575	52.825	1.5318	53.249	52.638	54.169	0.42348					117	36	6	0	0	0	0.80179	1	5262	5262		39.253	4.1008	1	6482700	+		10787	20620	7600	7608	12320	12320					0.017940367233677534
GGSGGVTV	8	Unmodified	_GGSGGVTV_					0	0	0			REV__ENSG00000197471|ENST00000652691|SPN	REV__ENSG00000197471|ENST00000652691|SPN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3689575195312	1	633.320231	632.312954	0.90259	0.00057163	-1.4576	-0.00092311	-0.55498	-0.00035148	633.320520128257	97.354	0.24892	97.517	97.422	97.671	0.16317					7	5	2	0	0	0	0.4196	1	10070	10070		7.6903	0	1	19678	+		10788	23235	7601	7609	12321	12321					-0.017909661876728933
GGSGSAERDPS	11	Unmodified	_GGSGSAERDPS_					0	0	0			REV__ENSG00000101882|ENST00000371410|NKAP	REV__ENSG00000101882|ENST00000371410|NKAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.22283935546875	2	510.223059	1018.43157	0.17912	9.1391E-05	-0.72506	-0.00036994	-0.54594	-0.00027855	510.22264857546446	93.108	1.9408	93.558	92.307	94.248	0.44988					118	45	4	0	0	0	0.72739	1	11116	11116		27.047	0.3544	1	1388700	+		10789	17308	7602	7610	12322	12322					-0.07691263740616705
GGSIRRFSF	9	Unmodified	_GGSIRRFSF_					0	0	0		ENSG00000178343|ENST00000319234|SHISA3	ENSG00000178343|ENST00000319234|SHISA3	ENSG00000178343|ENST00000319234|SHISA3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.7698364257812	2	513.777608	1025.54066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.509	1	23.459	22.959	23.959	-0.050077								0	0	0	0.28772	1	782	782		35.618	1.4457	1				10790	7200	7603	7611	12323	12323					0.02891411740165495
GGSPPKSKLL	10	Unmodified	_GGSPPKSKLL_					0	0	0		ENSG00000169375|ENST00000394947|SIN3A	ENSG00000169375|ENST00000394947|SIN3A	ENSG00000169375|ENST00000394947|SIN3A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.2969970703125	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.222	1	65.226	64.726	65.726	0.0046997								0	0	0	0.45132	1	6127	6127		23.523	2.5758	1				10791	6491	7604	7612	12324	12324					0.08914333339953373
GGSPRLAYR	9	Unmodified	_GGSPRLAYR_					0	0	0		ENST00000565022.1_1_16:31212908-31213633:-|nuORF	ENST00000565022.1_1_16:31212908-31213633:-|nuORF	ENST00000565022.1_1_16:31212908-31213633:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7712707519531	2	488.769783	975.525013	-0.62735	-0.00030663	3.4462	0.0016844	2.8189	0.0013778	488.7712933583105	85.931	0.90309	86.379	85.986	86.889	0.44736					46	21	3	0	0	0	0.67345	1	10092	10092		42.396	3.59	1	760770			10792	13904	7605	7613	12325	12325					0.036271252231244944
GGSPTPPQPP	10	Unmodified	_GGSPTPPQPP_					0	0	0			REV__nc|ENSG00000109794|A5PLN7-4|FAM149A	REV__nc|ENSG00000109794|A5PLN7-4|FAM149A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7342529296875	2	467.735074	933.455596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.04	1	70.587	70.087	71.087	0.54693								0	0	0	0.45132	1	7779	7779		40.778	0	1		+		10793	17774	7606	7614	12326	12326					-0.01379378516298857
GGSPVRPR	8	Unmodified	_GGSPVRPR_					0	0	0			REV__ENST00000478438.5_1_6:31994951-31995218:+|nuORF	REV__ENST00000478438.5_1_6:31994951-31995218:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2373046875	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.8347	1	7247	7247		23.042	3.6825	1	2127000	+		10794	27381	7607	7615	12327	12327					0.04243184505901354
GGSPVRPR	8	Unmodified	_GGSPVRPR_					0	0	0			REV__ENST00000478438.5_1_6:31994951-31995218:+|nuORF	REV__ENST00000478438.5_1_6:31994951-31995218:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2381286621094	2	413.238119	824.461684	-0.091267	-3.7715E-05	0.27761	0.00011472	0.18635	7.7005E-05	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.85277	1	8795	8795		25.45	4.5032	1	1247200	+		10795	27381	7607	7615	12328	12328					0.04243184505901354
GGSPYPGIPVE	11	Unmodified	_GGSPYPGIPVE_					0	0	0		ENSG00000068078|ENST00000440486|FGFR3;nc|ENSG00000068078|P22607-2|FGFR3;nc|ENSG00000068078|P22607-3|FGFR3;nc|ENSG00000160867|P22455-2|FGFR4;ENSG00000160867|ENST00000292408|FGFR4;ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;ENSG00000066468|ENST00000358487|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2	ENSG00000068078|ENST00000440486|FGFR3;ENST00000604236.5_1_10:123239373-123278228:-|nuORF	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.77001953125	2	536.769114	1071.52368	-0.55748	-0.00029924	4.3099	0.0023134	3.7524	0.0020142	536.7712654963615	70.523	0.64537	71.07	70.762	71.408	0.54756					26	15	2	0	0	0	0.60058	1	7869	7869		44.377	6.5657	1	550880			10796	1194;1162	7608	7616	12329	12329					-0.00922553656278069
GGSQVCRH	8	Unmodified	_GGSQVCRH_					0	0	0			REV__ENST00000496281.1_1_20:62320320-62321363:+|nuORF	REV__ENST00000496281.1_1_20:62320320-62321363:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1994323730469	2	422.198136	842.381719	0.088661	3.7433E-05	1.418	0.00059866	1.5066	0.0006361	422.198858438519	84.305	3.2598	84.752	82.851	86.111	0.44736					161	79	3	0	0	0	0.89962	1	9829	9829		38.806	3.1879	1	1051400	+		10797	27748	7609	7617	12330	12330					-0.045776251595953
GGSRKLVY	8	Unmodified	_GGSRKLVY_					0	0	0		ENST00000418618.1_1:31971908-31973444:+|nuORF	ENST00000418618.1_1:31971908-31973444:+|nuORF	ENST00000418618.1_1:31971908-31973444:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.25531005859375	2	440.255977	878.497401	-0.15864	-6.9843E-05	-1.2661	-0.0005574	-1.4247	-0.00062724	440.2552769905188	60.568	0.57997	60.556	60.24	60.82	-0.012203					32	14	3	0	0	0	0.89962	1	5633	5633		38.806	3.6054	1	187610			10798	11427	7610	7618	12331	12331					0.05329221962904285
GGSRPAWL	8	Unmodified	_GGSRPAWL_					0	0	0		ENST00000456860.6_2_11:123396356-123396845:+|nuORF	ENST00000456860.6_2_11:123396356-123396845:+|nuORF	ENST00000456860.6_2_11:123396356-123396845:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2264099121094	2	422.22722	842.439886	-0.93887	-0.00039642	2.144	0.00090525	1.2051	0.00050883	422.2280284167546	61.398	1.0667	61.414	61.239	62.306	0.015724					73	47	2	0	0	0	0.87064	1	5382	5382		29.15	2.3535	1	807210			10799	11972	7611	7619	12332	12332					0.012363797573243573
GGSRPLGR	8	Unmodified	_GGSRPLGR_					0	0	0			REV__nc|ENSG00000147144|Q96HB5-2|CCDC120	REV__nc|ENSG00000147144|Q96HB5-2|CCDC120	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.228271484375	2	400.230294	798.446034	-1.8752	-0.0007505	-2.6209	-0.001049	-4.4961	-0.0017995	400.22927707495484	54.825	2.6613	54.881	53.254	55.915	0.055611					132	91	2	0	0	0	0.87479	1	4544	4544		30.504	3.7075	1	1098100	+		10800	20057	7612	7620	12333	12333					0.038748979888509893
GGSRRSPSH	9	Unmodified	_GGSRRSPSH_					0	0	0		ENST00000426034.5_1_3:50596350-50596599:-|nuORF	ENST00000426034.5_1_3:50596350-50596599:-|nuORF	ENST00000426034.5_1_3:50596350-50596599:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.79486083984375	2	470.739014	939.463475	-1.3481	-0.00063462	3.6587	0.0017223	2.3105	0.0010877	470.7406564451592	46.007	0.39442	46.902	46.647	47.042	0.89542					21	9	3	0	0	0	0.20789	1	4297	4297		29.15	9.7896	1	441390			10801	11544	7613	7621	12334	12334					-0.008678064761397764
GGSRYYLAY	9	Unmodified	_GGSRYYLAY_					0	0	0		ENSG00000205572|ENST00000380750|SERF1B	ENSG00000205572|ENST00000380750|SERF1B	ENSG00000205572|ENST00000380750|SERF1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.2540893554688	2	525.256174	1048.49779	-0.60612	-0.00031837	-2.8978	-0.0015221	-3.5039	-0.0018404	525.2542622809208	38.083	0.65461	38.033	37.717	38.372	-0.050373					31	14	3	0	0	0	0.76255	1	2663	2663		35.618	3.6634	1	181230			10802	8533	7614	7622	12335	12335					-0.02451403107920669
GGSRYYLAY	9	Unmodified	_GGSRYYLAY_					0	0	0		ENSG00000205572|ENST00000380750|SERF1B	ENSG00000205572|ENST00000380750|SERF1B	ENSG00000205572|ENST00000380750|SERF1B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	525.256174	1048.49779	0.14221	7.4699E-05	-3.5883	-0.0018848	-3.4461	-0.0018101	525.254007189221	38.123	0.83837	38.095	37.614	38.452	-0.027843	0.06044	-7.7316E-05	NaN	35.618	35	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153760			10803	8533	7614	7622							-0.02451403107920669
GGSRYYLAY	9	Unmodified	_GGSRYYLAY_					0	0	0		ENSG00000205572|ENST00000380750|SERF1B	ENSG00000205572|ENST00000380750|SERF1B	ENSG00000205572|ENST00000380750|SERF1B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	525.256174	1048.49779	-0.23998	-0.00012605	-4.0738	-0.0021398	-4.3138	-0.0022658	525.2540143334384	38.089	0.67692	38.105	37.823	38.5	0.016563	0.070835	-0.00058735	NaN	35.618	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206990			10804	8533	7614	7622							-0.02451403107920669
GGSRYYLAY	9	Unmodified	_GGSRYYLAY_					0	0	0		ENSG00000205572|ENST00000380750|SERF1B	ENSG00000205572|ENST00000380750|SERF1B	ENSG00000205572|ENST00000380750|SERF1B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	525.256174	1048.49779	0.2602	0.00013667	-3.9376	-0.0020682	-3.6774	-0.0019316	525.2539292573229	37.878	0.51332	37.972	37.724	38.238	0.094322	-0.062382	-0.00044429	NaN	35.618	30	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	276420			10805	8533	7614	7622							-0.02451403107920669
GGSRYYLAY	9	Unmodified	_GGSRYYLAY_					0	0	0		ENSG00000205572|ENST00000380750|SERF1B	ENSG00000205572|ENST00000380750|SERF1B	ENSG00000205572|ENST00000380750|SERF1B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	525.256174	1048.49779	0.5176	0.00027187	1.4506	0.00076194	1.9682	0.0010338	525.2560738592272	37.561	0.33795	38.047	37.908	38.246	0.48581	0.012242	0.0052161	NaN	35.618	9	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65732			10806	8533	7614	7622							-0.02451403107920669
GGSSLFHKV	9	Unmodified	_GGSSLFHKV_					0	0	0			REV__nc|ENSG00000041515|Q9Y6X6-3|MYO16	REV__nc|ENSG00000041515|Q9Y6X6-3|MYO16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.25225830078125	2	466.253434	930.492316	-0.11965	-5.5788E-05	0.6468	0.00030157	0.52714	0.00024578	466.2536537931843	61.171	1.1863	61.159	60.038	61.224	-0.012203					48	38	2	0	0	0	0.62081	1	5640	5640		45.952	11.779	1	281870	+		10807	16321	7615	7623	12336	12336					0.024289181002814075
GGSVDASSAS	10	Unmodified	_GGSVDASSAS_					0	0	0		ENST00000575991.1_1_17:5185584-5185713:+|nuORF	ENST00000575991.1_1_17:5185584-5185713:+|nuORF	ENST00000575991.1_1_17:5185584-5185713:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.1842041015625	2	419.182872	836.35119	0.61354	0.00025718	1.4361	0.00060197	2.0496	0.00085916	419.18340916218006	87.397	0.86265	87.547	87.164	88.027	0.14956					44	19	3	0	0	0	0.86718	1	8633	8633		27.882	3.6795	1	459210			10808	14057	7616	7624	12337	12337					-0.07353125063661992
GGSVHPEE	8	Unmodified	_GGSVHPEE_					0	0	0		nc|ENSG00000171102|Q9NPH6-3|OBP2B	nc|ENSG00000171102|Q9NPH6-3|OBP2B	nc|ENSG00000171102|Q9NPH6-3|OBP2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.1839599609375	2	406.182675	810.350796	0.27785	0.00011286	0.19	7.7175E-05	0.46785	0.00019003	406.1826235089538	25.969	0.80628	25.993	25.661	26.467	0.024023					51	37	2	0	0	0	0.84341	1	972	972		24.203	2.2429	1	52713			10809	15091	7617	7625	12338	12338					-0.06196499992847748
GGSVRICCY	9	Carbamidomethyl (C)	_GGSVRIC(Carbamidomethyl (C))CY_	GGSVRIC(0.972)C(0.028)Y		GGSVRIC(15)C(-15)Y		0	1	0			REV__ENST00000374358.4_1_1:25664706-25666969:+|nuORF	REV__ENST00000374358.4_1_1:25664706-25666969:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	507.72613525390625	2	507.728412	1013.44227	-0.011027	-5.5987E-06	-4.3347	-0.0022009	-4.3458	-0.0022065	507.72602074388385	64.082	0.69483	64.048	63.709	64.404	-0.034256					34	19	3	0	0	0	0.31972	1	6105	6105		63.306	11.007	2	205940	+		10810	25786	7618	7626	12339	12339	315				-0.06391275891530768
GGSVRICCY	9	Carbamidomethyl (C)	_GGSVRIC(Carbamidomethyl (C))CY_					0	1	0			REV__ENST00000374358.4_1_1:25664706-25666969:+|nuORF	REV__ENST00000374358.4_1_1:25664706-25666969:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	507.728412	1013.44227	-0.057863	-2.9379E-05	-4.648	-0.0023599	-4.7059	-0.0023893	507.7259658794888	64.133	0.64474	64.132	63.857	64.502	-0.00078583	0.057599	-0.00051269	NaN	63.306	39	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124340	+		10811	25786	7618	7626			315				-0.06391275891530768
GGSVRICCY	9	Carbamidomethyl (C)	_GGSVRIC(Carbamidomethyl (C))CY_					0	1	0			REV__ENST00000374358.4_1_1:25664706-25666969:+|nuORF	REV__ENST00000374358.4_1_1:25664706-25666969:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	507.728412	1013.44227	-0.011027	-5.5987E-06	-4.3347	-0.0022009	-4.3458	-0.0022065	507.72602074388385	64.082	0.69483	64.048	63.709	64.404	-0.034256	-0.025915	-0.00019458	NaN	63.306	34	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	205940	+		10812	25786	7618	7626			315				-0.06391275891530768
GGSVRICCY	9	Carbamidomethyl (C)	_GGSVRIC(Carbamidomethyl (C))CY_					0	1	0			REV__ENST00000374358.4_1_1:25664706-25666969:+|nuORF	REV__ENST00000374358.4_1_1:25664706-25666969:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	507.728412	1013.44227	-1.3423	-0.00068151	-3.2247	-0.0016373	-4.567	-0.0023188	507.7266630606409	64.015	0.75561	64.042	63.65	64.406	0.027138	-0.031684	0.00093261	NaN	63.306	37	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	157270	+		10813	25786	7618	7626			315				-0.06391275891530768
GGTAKLPHQRL	11	Unmodified	_GGTAKLPHQRL_					0	0	0		ENSG00000100605|ENST00000267615|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.34326171875	2	589.343646	1176.67274	-0.63668	-0.00037522	-0.11858	-6.9885E-05	-0.75526	-0.00044511	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.69931	1	11068	11068		31.634	0.10446	1	2236100			10814	1856	7619	7627	12340	12340					0.09147016757128767
GGTAKVATPR	10	Unmodified	_GGTAKVATPR_					0	0	0			REV__ENSG00000109920|ENST00000263773|FNBP4	REV__ENSG00000109920|ENST00000263773|FNBP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27734375	2	479.277441	956.540328	0.28639	0.00013726	-0.32449	-0.00015552	-0.038098	-1.826E-05	479.27712266759204	81.87	2.8073	82.296	80.642	83.45	0.42646					178	68	3	0	0	0	0.78666	1	9609	9609		40.058	5.8856	1	1790000	+		10815	17781	7620	7628	12341	12341					0.060319920203255606
GGTGRRWY	8	Unmodified	_GGTGRRWY_					0	0	0		ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.7430419921875	2	476.741025	951.467498	-0.10266	-4.8944E-05	3.0801	0.0014684	2.9775	0.0014195	476.74240740505627	78.742	0.58604	78.798	78.549	79.135	0.056114					25	15	2	0	0	0	0.86677	1	7649	7649		27.882	0	1	108680			10816	3698	7621	7629	12342	12342					-0.010177169824373777
GGVARRLAL	9	Unmodified	_GGVARRLAL_					0	0	0			REV__ENST00000515682.5_1_4:8207046-8242679:+|nuORF	REV__ENST00000515682.5_1_4:8207046-8242679:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7909851074219	2	456.790518	911.566484	0.2225	0.00010163	4.1895	0.0019137	4.412	0.0020154	456.79228647464913	41.052	1.411	41.126	40.545	41.956	0.073418					84	43	2	0	0	0	0.7932	1	2689	2689		25.45	1.2474	1	319050	+		10817	18626	7622	7630	12343	12343					0.10716305982452923
GGVGAGAG	8	Unmodified	_GGVGAGAG_					0	0	0		nc|ENSG00000135439|Q99490|AGAP2;ENSG00000135439|ENST00000547588|AGAP2;ENSG00000116954|ENST00000373001|RRAGC	nc|ENSG00000135439|Q99490|AGAP2;REV__ENSG00000077097|ENST00000264331|TOP2B	nc|ENSG00000135439|Q99490|AGAP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.4954223632812	1	545.267801	544.260525	-1.3508	-0.00073656	3.7175	0.002027	2.3667	0.0012905	545.2703367491583	39.087	1.1144	39.641	39.111	40.225	0.55449					48	25	3	0	0	0	0.4196	1	3208	3208		24.504	7.799	1	373650			10818	4019;16735	7623	7631	12344	12344					-0.02983504530607206
GGVIPRRAS	9	Unmodified	_GGVIPRRAS_					0	0	0			REV__ENST00000591753.1_2_17:40716095-40716197:+|nuORF	REV__ENST00000591753.1_2_17:40716095-40716197:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7724609375	2	456.772326	911.530098	1.381	0.0006308	-0.41389	-0.00018905	0.96711	0.00044175	456.7715202988468	90.098	2.3552	90.028	88.797	91.153	-0.069977					132	55	5	0	0	0	0.74721	1	9404	9404		37.159	0	1	1094100	+		10819	26066	7624	7632	12345	12345					0.07079429085740685
GGVIWKTL	8	Unmodified	_GGVIWKTL_					0	0	0		nc|ENSG00000185436|Q8IU57-2|IFNLR1;ENSG00000185436|ENST00000327535|IFNLR1	nc|ENSG00000185436|Q8IU57-2|IFNLR1	nc|ENSG00000185436|Q8IU57-2|IFNLR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26531982421875	2	437.263271	872.511988	1.7622	0.00077054	3.9045	0.0017073	5.6667	0.0024778	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.89043	1	996	996		35.618	0	1	1079000			10820	7714	7625	7633	12346	12346					0.07063294111037521
GGVLGLSVEQV	11	Unmodified	_GGVLGLSVEQV_					0	0	0		ENSG00000090924|ENST00000425673|PLEKHG2;nc|ENSG00000090924|Q9H7P9-3|PLEKHG2;nc|ENSG00000090924|Q9H7P9-2|PLEKHG2	ENSG00000090924|ENST00000425673|PLEKHG2	ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.2998657226562	2	529.298039	1056.58152	0.13219	6.9967E-05	3.9298	0.00208	4.062	0.00215	529.2996849049168	58.481	1.0948	59.034	58.597	59.692	0.55323					63	26	4	0	0	0	0.66929	1	6154	6154		36.447	1.2947	1	1371900			10821	1660	7626	7634	12347	12347					0.0554970826913177
GGVLMGTLLL	10	Unmodified	_GGVLMGTLLL_					0	0	0			REV__ENSG00000184999|ENST00000332793|SLC22A10	REV__ENSG00000184999|ENST00000332793|SLC22A10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.293212890625	2	487.291171	972.567789	0.7033	0.00034271	3.3948	0.0016543	4.0981	0.001997	487.2927254358079	90.914	2.8458	91.068	90.679	93.525	0.15388					125	68	3	0	0	0	0.86452	1	9176	9176		30.504	0	1	1558400	+		10822	22723	7627	7635	12348	12348					0.08040759236359918
GGVLMTLLGL	10	Unmodified	_GGVLMTLLGL_					0	0	0		ENSG00000099958|ENST00000318109|DERL3;ENST00000404056.1_1_22:24179392-24180785:-|nuORF;nc|ENSG00000099958|Q96Q80-5|DERL3;nc|ENSG00000099958|Q96Q80-3|DERL3;nc|ENSG00000099958|Q96Q80-2|DERL3	ENSG00000099958|ENST00000318109|DERL3	ENSG00000099958|ENST00000318109|DERL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.2924499511719	2	487.291171	972.567789	-0.085833	-4.1825E-05	4.2446	0.0020684	4.1588	0.0020265	487.29311557745604	91.223	2.7335	91.293	90.723	93.457	0.069328					138	65	3	0	0	0	0.86305	1	9408	9408		31.955	1.4512	1	2116800			10823	1778	7628	7636	12349	12349					0.08040759236359918
GGVLMTLLGL	10	Unmodified	_GGVLMTLLGL_					0	0	0		ENSG00000099958|ENST00000318109|DERL3;ENST00000404056.1_1_22:24179392-24180785:-|nuORF;nc|ENSG00000099958|Q96Q80-5|DERL3;nc|ENSG00000099958|Q96Q80-3|DERL3;nc|ENSG00000099958|Q96Q80-2|DERL3	ENSG00000099958|ENST00000318109|DERL3	ENSG00000099958|ENST00000318109|DERL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.2926940917969	2	487.291171	972.567789	1.5746	0.00076728	2.5881	0.0012611	4.1627	0.0020284	487.2923164445536	91.172	2.4399	91.105	90.562	93.002	-0.067093					137	58	3	0	0	0	0.6398	1	9601	9601		47.916	17.412	1	2352400			10824	1778	7628	7636	12350	12350					0.08040759236359918
GGVRSPRL	8	Unmodified	_GGVRSPRL_					0	0	0		ENST00000517535.5_1_8:22423716-22423941:+|nuORF	ENST00000517535.5_1_8:22423716-22423941:+|nuORF	ENST00000517535.5_1_8:22423716-22423941:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.25457763671875	2	421.253769	840.492984	0.58556	0.00024667	0.1281	5.3962E-05	0.71366	0.00030063	421.25366472055117	84.161	1.6821	84.309	83.832	85.514	0.14794					87	38	3	0	0	0	0.884	1	8214	8214		33.516	5.2613	1	609670			10825	13099	7629	7637	12351	12351					0.06635757539982023
GGVRVARP	8	Unmodified	_GGVRVARP_					0	0	0			REV__nc|ENSG00000168477|P22105-1|TNXB	REV__nc|ENSG00000168477|P22105-1|TNXB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24896240234375	2	406.248486	810.48242	-0.18684	-7.5904E-05	0.84714	0.00034415	0.6603	0.00026824	406.24872241647245	90.972	2.1991	91.041	90.513	92.712	0.069328					111	52	3	0	0	0	0.81548	1	9335	9335		20.482	0	1	1239900	+		10826	21491	7630	7638	12352	12352					0.06959774885558545
GGVSEMVF	8	Unmodified	_GGVSEMVF_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1;nc|ENSG00000106278|P23471-3|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.1940612792969	2	413.194196	824.37384	-0.18763	-7.7529E-05	-1.0101	-0.00041736	-1.1977	-0.00049489	413.19367565265276	78.88	3.1143	78.936	78.489	81.603	0.056122					158	90	2	0	0	0	0.91005	1	7699	7699		42.474	0	1	901690			10827	2287	7631	7639	12353	12353					-0.04537197199726961
GGVSEMVF	8	Unmodified	_GGVSEMVF_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1;nc|ENSG00000106278|P23471-3|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1939697265625	2	413.194196	824.37384	-0.086313	-3.5664E-05	-2.3678	-0.00097836	-2.4541	-0.001014	413.1936016248627	77.941	2.7232	78.504	78.093	80.816	0.56332					177	64	5	0	0	0	0.9159	1	8968	8968		44.531	2.0566	1	6380300			10828	2287	7631	7639	12354	12354					-0.04537197199726961
GGVSVMKTIP	10	Unmodified	_GGVSVMKTIP_					0	0	0			REV__ENSG00000110237|ENST00000263674|ARHGEF17	REV__ENSG00000110237|ENST00000263674|ARHGEF17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7796325683594	2	494.778428	987.542302	1.0619	0.0005254	2.8604	0.0014153	3.9223	0.0019407	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.86763	1	8774	8774		26.693	2.1737	1	657500	+		10829	17803	7632	7640	12355	12355					0.0480328471392113
GGVTGAAVLRG	11	Unmodified	_GGVTGAAVLRG_					0	0	0			REV__ENST00000305123.5_1_2:227663749-227664043:-|nuORF	REV__ENST00000305123.5_1_2:227663749-227664043:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.278076171875	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.62614	1	7741	7741		41.427	6.2259	1	1802300	+		10830	24814	7633	7641	12356	12356					0.06031992020314192
GGWEKILGIS	10	Unmodified	_GGWEKILGIS_					0	0	0		ENST00000266434.8_1_12:12247552-12251919:+|nuORF;ENSG00000121380|ENST00000308721|BCL2L14	ENST00000266434.8_1_12:12247552-12251919:+|nuORF	ENST00000266434.8_1_12:12247552-12251919:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2919311523438	2	530.295299	1058.57605	-0.73575	-0.00039016	-2.8196	-0.0014952	-3.5553	-0.0018854	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.86218	1	9064	9064		32.812	1.2826	1	1390700			10831	3179	7634	7642	12357	12357					0.049100294773325004
GGWLARLQ	8	Unmodified	_GGWLARLQ_					0	0	0			REV__ENSG00000197136|ENST00000355703|PCNX3	REV__ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7557067871094	2	450.756144	899.497735	-0.14135	-6.3713E-05	-4.1513	-0.0018712	-4.2927	-0.0019349	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.86791	1	8127	8127		28.254	0.17279	1	337080	+		10832	23201	7635	7643	12358	12358					0.043966416827515786
GGWRLLTLP	9	Unmodified	_GGWRLLTLP_					0	0	0		ENST00000562588.5_1_16:53737575-53737698:-|nuORF	ENST00000562588.5_1_16:53737575-53737698:-|nuORF	ENST00000562588.5_1_16:53737575-53737698:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80169677734375	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.78536	1	3257	3257		29.15	6.1071	1	412810			10833	13851	7636	7644	12359	12359					0.08122056922411502
GHAASLPVPAL	11	Unmodified	_GHAASLPVPAL_					0	0	0		ENST00000585421.5_1_17:76851400-76851721:-|nuORF	ENST00000585421.5_1_17:76851400-76851721:-|nuORF	ENST00000585421.5_1_17:76851400-76851721:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.79345703125	2	516.795466	1031.57638	-0.83709	-0.0004326	-3.0347	-0.0015683	-3.8718	-0.0020009	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.72918	1	8451	8451		26.693	1.1189	1	490270			10834	14147	7637	7645	12360	12360					0.06185449197187154
GHAASLPVPAL	11	Unmodified	_GHAASLPVPAL_					0	0	0		ENST00000585421.5_1_17:76851400-76851721:-|nuORF	ENST00000585421.5_1_17:76851400-76851721:-|nuORF	ENST00000585421.5_1_17:76851400-76851721:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7933959960938	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.68378	1	8840	8840		34.173	7.3764	1	817800			10835	14147	7637	7645	12361	12361					0.06185449197187154
GHACVLLN	8	Unmodified	_GHACVLLN_					0	0	0			REV__ENST00000369857.8_1_10:104860573-104871503:-|nuORF	REV__ENST00000369857.8_1_10:104860573-104871503:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.23785400390625	2	413.71563	825.416708	-1.5603	-0.00064551	2.5895	0.0010713	1.0292	0.0004258	413.7181685821522	77.853	1.7854	77.944	77.562	79.347	0.091438					67	61	2	0	0	0	0.4196	1	7291	7291		28.254	14.479	1	34914	+		10836	16729	7638	7646	12362	12362					-0.002983823516501616
GHAIKAAYP	9	Unmodified	_GHAIKAAYP_					0	0	0		ENST00000524082.5_1_5:167913503-167919924:+|nuORF;ENST00000521939.5_1_5:167913503-167921691:+|nuORF;nc|ENSG00000113643|P54136-2|RARS1;ENSG00000113643|ENST00000231572|RARS1	ENST00000524082.5_1_5:167913503-167919924:+|nuORF	ENST00000524082.5_1_5:167913503-167919924:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.25384521484375	2	464.255977	926.497401	-1.597	-0.00074142	-2.6107	-0.001212	-4.2077	-0.0019534	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.69914	1	8074	8074		40.573	0	1	1324500			10837	2735	7639	7647	12363	12363					0.031212219628855564
GHAKLSRK	8	Unmodified	_GHAKLSRK_					0	0	0			REV__ENSG00000204947|ENST00000378061|ZNF425	REV__ENSG00000204947|ENST00000378061|ZNF425	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.7768249511719	2	448.774868	895.535184	0.23966	0.00010755	4.3231	0.0019401	4.5627	0.0020476	448.77664433620475	43.052	1.972	43.023	42.119	44.091	-0.029465					93	47	3	0	0	0	0.91005	1	3256	3256		42.474	5.3154	1	223720	+		10838	23530	7640	7648	12364	12364					0.08323732948383622
GHALLLASKMD	11	Unmodified	_GHALLLASKMD_					0	0	0		nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3106079101562	2	578.313166	1154.61178	-0.93812	-0.00054253	-3.5765	-0.0020683	-4.5146	-0.0026108	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.64498	1	12111	12111		39.253	15.73	1	3649700			10839	4959	7641	7649	12365	12365					0.04065743662681598
GHALRRLPAA	10	Unmodified	_GHALRRLPAA_					0	0	0		ENST00000409587.5_1_19:40854624-40871810:+|nuORF	ENST00000409587.5_1_19:40854624-40871810:+|nuORF	ENST00000409587.5_1_19:40854624-40871810:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.3190307617188	2	531.319974	1060.6254	-0.033063	-1.7567E-05	-1.1196	-0.00059484	-1.1526	-0.00061241	531.3191547732448	95.172	2.5483	95.24	94.714	97.262	0.068336					181	59	5	0	0	0	0.86201	1	9945	9945		24.203	2.2429	1	3878900			10840	11312	7642	7650	12366	12366					0.09750782276796599
GHALRRLPAA	10	Unmodified	_GHALRRLPAA_					0	0	0		ENST00000409587.5_1_19:40854624-40871810:+|nuORF	ENST00000409587.5_1_19:40854624-40871810:+|nuORF	ENST00000409587.5_1_19:40854624-40871810:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.3190307617188	2	531.319974	1060.6254	1.2436	0.00066073	-2.5045	-0.0013307	-1.261	-0.00066997	531.3184005268905	94.973	2.3333	95.019	94.535	96.868	0.046173					183	54	5	0	0	0	0.86305	2	10032	10020;10032		31.955	9.995	1	4128600			10841	11312	7642	7650	12367;12368	12368					0.09750782276796599
GHALRRLPAA	10	Unmodified	_GHALRRLPAA_					0	0	0		ENST00000409587.5_1_19:40854624-40871810:+|nuORF	ENST00000409587.5_1_19:40854624-40871810:+|nuORF	ENST00000409587.5_1_19:40854624-40871810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.31884765625	2	531.319974	1060.6254	-0.04293	-2.281E-05	-1.1073	-0.00058834	-1.1503	-0.00061115	531.3190516758626	94.867	1.8687	95.098	94.611	96.479	0.23103					163	44	5	0	0	0	0.84112	1	9701	9701		37.159	4.3467	1	2940800			10842	11312	7642	7650	12369	12369					0.09750782276796599
GHALRRLPAA	10	Unmodified	_GHALRRLPAA_					0	0	0		ENST00000409587.5_1_19:40854624-40871810:+|nuORF	ENST00000409587.5_1_19:40854624-40871810:+|nuORF	ENST00000409587.5_1_19:40854624-40871810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.3187866210938	2	531.319974	1060.6254	0.78202	0.00041551	-1.9058	-0.0010126	-1.1238	-0.00059708	531.3186205937698	94.916	2.6028	95.079	94.616	97.219	0.16307					179	61	5	0	0	0	0.86201	1	9712	9712		24.203	0	1	2661600			10843	11312	7642	7650	12370	12370					0.09750782276796599
GHALRRLPAA	10	Unmodified	_GHALRRLPAA_					0	0	0		ENST00000409587.5_1_19:40854624-40871810:+|nuORF	ENST00000409587.5_1_19:40854624-40871810:+|nuORF	ENST00000409587.5_1_19:40854624-40871810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.3186645507812	2	531.319974	1060.6254	-1.513	-0.00080386	0.37404	0.00019874	-1.1389	-0.00060513	531.3198552399973	94.964	2.533	95.167	94.65	97.183	0.20242					171	59	5	0	0	0	0.86452	1	9653	9653		30.504	1.3541	1	2353400			10844	11312	7642	7650	12371	12371					0.09750782276796599
GHARCQPG	8	Unmodified	_GHARCQPG_					0	0	0		ENSG00000168758|ENST00000305476|SEMA4C;ENST00000467747.1_1_2:97526365-97527817:-|nuORF;ENST00000474420.1_1_2:97526365-97527817:-|nuORF	ENSG00000168758|ENST00000305476|SEMA4C	ENSG00000168758|ENST00000305476|SEMA4C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.1942443847656	2	413.192854	824.371155	2.9123	0.0012034	-0.79708	-0.00032935	2.1153	0.00087401	413.192422420302	85.553	2.8893	85.61	84.543	87.432	0.057899					115	66	2	0	0	0	0.90465	1	8672	8672		40.573	3.4135	1	1337900			10845	6431	7643	7651	12372	12372					-0.048056078140234604
GHARSLHNKA	10	Unmodified	_GHARSLHNKA_					0	0	0			REV__nc|ENSG00000062524|P29376-2|LTK	REV__nc|ENSG00000062524|P29376-2|LTK	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.316650390625	2	545.796863	1089.57917	-0.67957	-0.00037091	0.81915	0.00044709	0.13958	7.6182E-05	545.7966560024614	89.226	0.34389	89.226	89.043	89.387	0					9	7	2	0	0	0	0.37624	1	8617	8617		23.523	1.5628	1	44087	+		10846	16462	7644	7652	12373	12373					0.03796717374711989
GHASSMQPE	9	Unmodified	_GHASSMQPE_					0	0	0			REV__chr10:53026127-53029892|33|64.94|0.0|22.63|-|1|TE_info:HERV30-int,HERV30-int_dup42,ERV1,LTR,acceptor,-,53025889,53026127|None,LINC02672|2	REV__chr10:53026127-53029892|33|64.94|0.0|22.63|-|1|TE_info:HERV30-int,HERV30-int_dup42,ERV1,LTR,acceptor,-,53025889,53026127|None,LINC02672|2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2874755859375	2	472.200541	942.38653	-0.011388	-5.3776E-06	-2.831	-0.0013368	-2.8424	-0.0013422	472.2002545999462	95.164	0.53194	95.211	94.963	95.495	0.046989					16	12	2	0	0	0	0.20789	1	10066	10066		25.574	0	1	64866	+		10847	15475	7645	7653	12374	12374					-0.0869678580748996
GHATLFSA	8	Unmodified	_GHATLFSA_					0	0	0		ENST00000429089.6_1_8:42033183-42033450:-|nuORF	ENST00000429089.6_1_8:42033183-42033450:-|nuORF	ENST00000429089.6_1_8:42033183-42033450:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.2052917480469	2	402.205953	802.397353	-0.18632	-7.4938E-05	-0.51168	-0.0002058	-0.698	-0.00028074	402.20569515988933	98.659	2.0984	98.708	97.873	99.972	0.04982					129	48	4	0	0	0	0.884	1	10480	10480		33.516	3.0119	1	1555200			10848	11600	7646	7654	12375	12375					-0.011750153709044753
GHCLGIIY	8	Unmodified	_GHCLGIIY_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|173|1|anti-sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|173|1|anti-sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|173|1|anti-sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2654113769531	2	438.225831	874.437109	1.961	0.00085938	0.52941	0.000232	2.4905	0.0010914	438.2259059305017	27.057	0.6158	26.717	26.414	27.029	-0.34035					19	13	2	0	0	0	0.4196	1	1549	1549		24.504	0	1	71573			10849	14504	7647	7655	12376	12376					-0.005132116918503016
GHDRGAKV	8	Unmodified	_GHDRGAKV_					0	0	0		ENSG00000146085|ENST00000274813|MMUT	ENSG00000146085|ENST00000274813|MMUT	ENSG00000146085|ENST00000274813|MMUT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2272644042969	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.89043	1	7591	7591		35.618	2.1027	1	831720			10850	4819	7648	7656	12377	12377					0.015265941262327942
GHDRTSPA	8	Unmodified	_GHDRTSPA_					0	0	0			REV__ENSG00000144589|ENST00000456909|STK11IP	REV__ENSG00000144589|ENST00000456909|STK11IP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.70367431640625	2	420.701566	839.388579	1.2206	0.00051351	4.1	0.0017249	5.3206	0.0022384	420.7031344648382	36.012	0.90686	36.021	35.705	36.612	0.0092773					38	19	3	0	0	0	0.92973	1	2308	2308		50.025	2.1089	1	139740	+		10851	19901	7649	7657	12378	12378					-0.03753989007373093
GHEDKIRVVLN	11	Unmodified	_GHEDKIRVVLN_					0	0	0		ENSG00000024422|ENST00000263277|EHD2;nc|ENSG00000024422|Q9NZN4-2|EHD2	ENSG00000024422|ENST00000263277|EHD2	ENSG00000024422|ENST00000263277|EHD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.35791015625	2	640.359493	1278.70443	-0.067952	-4.3514E-05	-0.91045	-0.00058301	-0.9784	-0.00062653	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.69248	2	10531	10531;10543		32.751	8.2313	1	640120			10852	865	7650	7658	12379;12380	12379					0.07622964720439995
GHEGADAGAP	10	Unmodified	_GHEGADAGAP_					0	0	0			REV__ENST00000221249.10_2_19:7619542-7619816:+|nuORF	REV__ENST00000221249.10_2_19:7619542-7619816:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2551574707031	2	441.191031	880.367509	-1.4696	-0.00064837	1.276	0.00056297	-0.19357	-8.5403E-05	441.1914282675341	66.708	0.08358	66.842	66.795	66.879	0.13326					4	2	2	0	0	0	0.37624	1	5931	5931		34.173	8.7224	1	19419	+		10853	24158	7651	7659	12381	12381					-0.07745999106896306
GHEKLKKKLD	10	Unmodified	_GHEKLKKKLD_					0	0	0			REV__ENSG00000070950|ENST00000264926|RAD18	REV__ENSG00000070950|ENST00000264926|RAD18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.8551635742188	2	598.361505	1194.70846	-0.10487	-6.275E-05	-3.7081	-0.0022188	-3.8129	-0.0022815	598.3593234657415	94.339	4.754	94.774	93.51	98.264	0.43539					199	117	2	0	0	0	0.86272	2	11240	11230;11240		31.53	3.4483	1	27641000	+		10854	16618	7652	7660	12382;12383	12383					0.11889054214134376
GHENITTY	8	Unmodified	_GHENITTY_					0	0	0		ENSG00000145536|ENST00000274181|ADAMTS16;nc|ENSG00000145536|Q8TE57-2|ADAMTS16	ENSG00000145536|ENST00000274181|ADAMTS16	ENSG00000145536|ENST00000274181|ADAMTS16	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.71490478515625	2	467.716882	933.41921	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.341	1	89.791	89.291	90.291	0.45058								0	0	0	0.30074	1	10547	10547		40.778	1.972	1				10855	4775	7653	7661	12384	12384					-0.05016255413011095
GHERMIALVKR	11	Unmodified	_GHERMIALVKR_					0	0	0			REV__nc|ENSG00000105939|Q7Z2W4-3|ZC3HAV1	REV__nc|ENSG00000105939|Q7Z2W4-3|ZC3HAV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.25653076171875	3	437.255563	1308.74486	0.72446	0.00031677	3.3633	0.0014706	4.0878	0.0017874	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.71207	1	10240	10240		29.551	0.97402	1	670840	+		10856	17583	7654	7662	12385	12385					0.10283607839164688
GHESAQHS	8	Unmodified	_GHESAQHS_					0	0	0		ENST00000569187.5_1_16:81015453-81040468:-|nuORF	ENST00000569187.5_1_16:81015453-81040468:-|nuORF	ENST00000569187.5_1_16:81015453-81040468:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.77484130859375	2	426.683373	851.352193	-0.76524	-0.00032651	0.74405	0.00031747	-0.021188	-9.0407E-06	426.6835567403001	38.995	1.3091	39.337	38.938	40.247	0.34187					54	30	2	0	0	0	0.4196	1	3187	3187		31.955	15.482	1	397880			10857	13977	7655	7663	12386	12386					-0.07942865904090013
GHFEEVTIPP	10	Unmodified	_GHFEEVTIPP_					0	0	0		ENSG00000083857|ENST00000441802|FAT1;ENST00000500085.2_1_4:187509748-187518366:-|nuORF	ENSG00000083857|ENST00000441802|FAT1	ENSG00000083857|ENST00000441802|FAT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.7974853515625	2	563.282389	1124.55022	0.9553	0.0005381	-0.62613	-0.00035269	0.32917	0.00018542	563.2818340279964	95.79	0.73492	96.194	95.93	96.665	0.40451					20	17	2	0	0	0	0.37624	1	11476	11476		37.159	26.894	1	153070			10858	1509	7656	7664	12387	12387					-0.007068647649475679
GHFLQEKL	8	Unmodified	_GHFLQEKL_					0	0	0		ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.266845703125	2	486.269084	970.523616	-0.087647	-4.262E-05	-3.8323	-0.0018635	-3.9199	-0.0019061	486.26710603472304	86.356	4.0954	86.423	85.117	89.212	0.067444					314	95	4	0	0	0	0.89043	1	8634	8634		35.618	1.4457	1	1700900			10859	1166	7657	7665	12388	12388					0.0371749113437545
GHGGISYL	8	Unmodified	_GHGGISYL_					0	0	0			REV__ENSG00000178502|ENST00000319121|KLHL11	REV__ENSG00000178502|ENST00000319121|KLHL11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.2052917480469	2	402.205953	802.397353	-0.18632	-7.4938E-05	-0.51168	-0.0002058	-0.698	-0.00028074	402.20569515988933	98.659	2.0984	98.708	97.873	99.972	0.04982					129	48	4	0	0	0	0.86791	1	10408	10408		28.254	0	1	1555200	+		10860	22283	7658	7666	12389	12389					-0.01175015370915844
GHGGYDSD	8	Unmodified	_GHGGYDSD_					0	0	0		nc|ENSG00000148690|Q70Z53-3|FRA10AC1;nc|ENSG00000148690|Q70Z53-2|FRA10AC1;nc|ENSG00000148690|Q70Z53-4|FRA10AC1;nc|ENSG00000148690|Q70Z53-5|FRA10AC1;ENSG00000148690|ENST00000359204|FRA10AC1	nc|ENSG00000148690|Q70Z53-3|FRA10AC1	nc|ENSG00000148690|Q70Z53-3|FRA10AC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.1702575683594	2	404.148832	806.283111	-1.8319	-0.00074037	-1.3418	-0.0005423	-3.1738	-0.0012827	404.14731328953	78.379	0.34897	78.506	78.29	78.639	0.12695					13	11	2	0	0	0	0.4196	1	7384	7384		20.482	16.166	1	38000			10861	14985	7659	7667	12390	12390					-0.12777949923656706
GHGKLRAS	8	Unmodified	_GHGKLRAS_					0	0	0			REV__ENST00000455712.5_2_3:184080408-184081026:+|nuORF	REV__ENST00000455712.5_2_3:184080408-184081026:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2370910644531	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.82658	1	7548	7548		21.96	0.25755	1	1692300	+		10862	26946	7660	7668	12391	12391					0.04243184505889985
GHGLLPLISVA	11	Unmodified	_GHGLLPLISVA_					0	0	0			REV__ENSG00000084463|ENST00000261167|WBP11	REV__ENSG00000084463|ENST00000261167|WBP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8278198242188	2	538.826766	1075.63898	1.5025	0.0008096	-3.6046	-0.0019423	-2.1021	-0.0011327	538.8249209892833	104.7	0.46516	104.86	104.72	105.18	0.15584					19	12	2	0	0	0	0.75495	1	12765	12765		20.947	0.4651	1	124720	+		10863	16874	7661	7669	12392	12392					0.10418595265377917
GHGRTLFL	8	Unmodified	_GHGRTLFL_					0	0	0		ENSG00000158828|ENST00000321556|PINK1;ENST00000492302.1_1_1:20966360-20975203:+|nuORF	ENSG00000158828|ENST00000321556|PINK1	ENSG00000158828|ENST00000321556|PINK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.754638671875	2	450.756144	899.497735	-1.264	-0.00056978	-3.0711	-0.0013843	-4.3351	-0.0019541	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.89457	1	7422	7422		37.028	7.8789	1	414240			10864	5499	7662	7670	12393	12393					0.043966416827515786
GHGTPPLPVL	10	Unmodified	_GHGTPPLPVL_					0	0	0			REV__ENST00000314045.11_1_12:113595922-113596300:-|nuORF	REV__ENST00000314045.11_1_12:113595922-113596300:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.30084228515625	2	494.284734	986.554916	-0.074869	-3.7007E-05	3.6611	0.0018096	3.5862	0.0017726	494.2873840489548	97.371	0.58791	97.433	97.256	97.844	0.062225					27	13	3	0	0	0	0.37624	1	10305	10305		35.618	17.294	1	510080	+		10865	24930	7663	7671	12394	12394					0.0611006416845612
GHHKRVQEL	9	Unmodified	_GHHKRVQEL_					0	0	0			REV__ENST00000472310.5_1_4:110481463-110603916:+|nuORF	REV__ENST00000472310.5_1_4:110481463-110603916:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3059692382812	2	552.307064	1102.59957	-0.70613	-0.00039	-0.47813	-0.00026407	-1.1843	-0.00065407	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.67345	1	9655	9655		42.396	5.237	1	1609500	+		10866	27257	7664	7672	12395	12395					0.05237888034525895
GHIFLNTSL	9	Unmodified	_GHIFLNTSL_					0	0	0		ENSG00000165195|ENST00000333590|PIGA;nc|ENSG00000165195|P37287-3|PIGA;nc|ENSG00000165195|P37287-2|PIGA	ENSG00000165195|ENST00000333590|PIGA	ENSG00000165195|ENST00000333590|PIGA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2904052734375	2	501.274367	1000.53418	0.84632	0.00042424	1.5399	0.00077192	2.3862	0.0011962	501.2740419209633	84.575	0.26038	84.503	84.369	84.629	-0.07196					6	5	2	0	0	0	0.20789	1	8644	8644		30.504	0	1	19063			10867	6060	7665	7673	12396	12396					0.03393473788821666
GHIKFLTK	8	Unmodified	_GHIKFLTK_					0	0	0		nc|ENSG00000140612|P67812-2|SEC11A;ENSG00000140612|ENST00000268220|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A;nc|ENSG00000226098|P0C7V7|SEC11B;nc|ENSG00000140612|P67812-3|SEC11A	nc|ENSG00000140612|P67812-2|SEC11A	nc|ENSG00000140612|P67812-2|SEC11A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.28802490234375	2	472.28982	942.565087	-0.91361	-0.00043149	-2.9295	-0.0013836	-3.8431	-0.0018151	472.2883987984471	99.414	1.6316	99.414	99.097	100.73	0					84	38	3	0	0	0	0.86677	1	10100	10100		27.882	2.4321	1	360760			10868	4451	7666	7674	12397	12397					0.09150671893689832
GHIKFLTK	8	Unmodified	_GHIKFLTK_					0	0	0		nc|ENSG00000140612|P67812-2|SEC11A;ENSG00000140612|ENST00000268220|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A;nc|ENSG00000226098|P0C7V7|SEC11B;nc|ENSG00000140612|P67812-3|SEC11A	nc|ENSG00000140612|P67812-2|SEC11A	nc|ENSG00000140612|P67812-2|SEC11A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2884216308594	2	472.28982	942.565087	-1.7052	-0.00080534	-2.46	-0.0011618	-4.1652	-0.0019672	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.81184	1	12479	12479		19.997	0.6368	1	3080300			10869	4451	7666	7674	12398	12398					0.09150671893689832
GHIKSIISLLD	11	Unmodified	_GHIKSIISLLD_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2;ENSG00000198838|ENST00000634891|RYR3;nc|ENSG00000198838|Q15413-2|RYR3;nc|ENSG00000198838|Q15413-3|RYR3	nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198838|ENST00000634891|RYR3	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.8566284179688	2	598.355888	1194.69722	1.6651	0.0009963	4.0005	0.0023937	5.6656	0.00339	598.3583175004217	94.283	4.5904	94.715	93.221	97.812	0.4324					199	114	2	0	0	0	0.72106	1	11192	11192		28.081	1.3886	1	27623000			10870	8298;8348	7667	7675	12399	12399					0.10766232120022323
GHILRKALMRA	11	Unmodified	_GHILRKALMRA_					0	0	0			REV__ENSG00000108094|ENST00000374749|CUL2	REV__ENSG00000108094|ENST00000374749|CUL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.593017578125	3	422.592286	1264.75503	1.8674	0.00078915	0.070081	2.9616E-05	1.9375	0.00081877	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.78391	1	4889	4889		14.694	0	1	997830	+		10871	17694	7668	7676	12400	12400					0.133242155643984
GHKGQGSLN	9	Unmodified	_GHKGQGSLN_					0	0	0			REV__nc|ENSG00000172530|Q8N9N5-7|BANP	REV__nc|ENSG00000172530|Q8N9N5-7|BANP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2326965332031	2	449.230491	896.446428	-1.619	-0.00072729	1.9511	0.00087651	0.33216	0.00014922	449.23133844286133	83.319	3.7519	83.457	82.118	85.87	0.13811					166	86	3	0	0	0	0.75725	1	8004	8004		36.447	0.82846	1	160270	+		10872	21839	7669	7677	12401	12401					-0.005937270819458718
GHKKVAMKF	9	Unmodified	_GHKKVAMKF_					0	0	0			REV__ENST00000551359.5_1_12:56713025-56726878:-|nuORF	REV__ENST00000551359.5_1_12:56713025-56726878:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3045654296875	2	523.302404	1044.59026	-0.17027	-8.9103E-05	2.5261	0.0013219	2.3558	0.0012328	523.3036223327587	91.376	2.6869	91.596	91.26	93.946	0.22013					111	63	2	0	0	0	0.7932	1	9266	9266		24.203	0	1	1188800	+		10873	19227	7670	7678	12402	12402					0.06974403424624143
GHKLPVPG	8	Unmodified	_GHKLPVPG_					0	0	0		ENSG00000166260|ENST00000299335|COX11	ENSG00000166260|ENST00000299335|COX11	ENSG00000166260|ENST00000299335|COX11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.7397155761719	2	402.739963	803.465373	-1.9105	-0.00076942	0.90285	0.00036361	-1.0076	-0.00040581	402.74023585359686	35.547	1.7419	35.578	35.255	36.997	0.031132					93	49	3	0	0	0	0.86791	1	1871	1871		28.254	6.5519	1	194790			10874	6173	7671	7679	12403	12403					0.05577854279761141
GHKRGSTP	8	Unmodified	_GHKRGSTP_					0	0	0			REV__ENST00000343106.9_1_4:103747817-103748066:-|nuORF	REV__ENST00000343106.9_1_4:103747817-103748066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.22747802734375	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.89962	1	7863	7863		38.806	1.647	1	743780	+		10875	25288	7672	7680	12404	12404					0.015265941262214255
GHKRKNWKVRR	11	Unmodified	_GHKRKNWKVRR_					0	0	0		ENSG00000100558|ENST00000216446|PLEK2	ENSG00000100558|ENST00000216446|PLEK2	ENSG00000100558|ENST00000216446|PLEK2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.31207275390625	3	488.963882	1463.86982	0.07066	3.455E-05	-3.0788	-0.0015054	-3.0081	-0.0014709	488.9623700287033	16.457	0.63214	16.517	16.397	17.029	0.059269					64	26	4	0	0	0	0.17784	1	149	149		17.167	5.7121	1	1644100			10876	1848	7673	7681	12405	12405					0.15643661090552996
GHKVDAVF	8	Unmodified	_GHKVDAVF_					0	0	0		ENSG00000196611|ENST00000315274|MMP1	ENSG00000196611|ENST00000315274|MMP1	ENSG00000196611|ENST00000315274|MMP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.73388671875	2	436.734877	871.455202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.136	1	26.097	25.597	26.597	-0.038523								0	0	0	0.29353	1	1155	1155		28.254	6.5519	1				10877	8081	7674	7682	12406	12406					0.014332465545066952
GHKVKTLLGKM	11	Unmodified	_GHKVKTLLGKM_					0	0	0			REV__ENSG00000152527|ENST00000282406|PLEKHH2	REV__ENSG00000152527|ENST00000282406|PLEKHH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.3692626953125	2	606.368275	1210.722	-0.02762	-1.6748E-05	2.1046	0.0012762	2.077	0.0012594	606.3694476526515	94.093	3.5324	94.139	93.078	96.61	0.045456					200	83	3	0	0	0	0.7434	1	9944	9944		23.523	0	1	863170	+		10878	20304	7675	7683	12407	12407					0.12506588721726075
GHKVYGAIL	9	Unmodified	_GHKVYGAIL_					0	0	0		ENSG00000162227|ENST00000294168|TAF6L	ENSG00000162227|ENST00000294168|TAF6L	ENSG00000162227|ENST00000294168|TAF6L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774963378906	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.7932	1	8284	8284		25.45	0.93098	1	7438100			10879	5673	7676	7684	12408	12408					0.0643408151404401
GHLACFSGG	9	Unmodified	_GHLACFSGG_					0	0	0		ENSG00000117643|ENST00000374332|MAN1C1	ENSG00000117643|ENST00000374332|MAN1C1	ENSG00000117643|ENST00000374332|MAN1C1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.6917724609375	2	424.689613	847.364672	2.1322	0.00090554	1.9827	0.00084201	4.1149	0.0017476	424.6905373407072	105.66	0.70683	105.82	105.51	106.22	0.15583					21	19	2	0	0	0	0.76996	1	12891	12891		33.516	0.70317	1	77910			10880	2995	7677	7685	12409	12409					-0.06511545765408755
GHLACFSGG	9	Unmodified	_GHLACFSGG_					0	0	0		ENSG00000117643|ENST00000374332|MAN1C1	ENSG00000117643|ENST00000374332|MAN1C1	ENSG00000117643|ENST00000374332|MAN1C1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	424.689613	847.364672	4.182	0.0017761	0.30476	0.00012943	4.4868	0.0019055	424.68991470869923	105.64	0.76003	105.83	105.36	106.12	0.18647	0.0047087	-0.0011194	NaN	33.516	24	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78861			10881	2995	7677	7685							-0.06511545765408755
GHLFQKLASQ	10	Unmodified	_GHLFQKLASQ_					0	0	0		nc|ENSG00000159842|Q12979-4|ABR;nc|ENSG00000159842|Q12979-2|ABR;ENSG00000159842|ENST00000302538|ABR;ENST00000573325.1_1_17:986639-994967:-|nuORF	nc|ENSG00000159842|Q12979-4|ABR	nc|ENSG00000159842|Q12979-4|ABR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	564.810302734375	2	564.811648	1127.60874	-1.2607	-0.00071205	-0.6991	-0.00039486	-1.9598	-0.0011069	564.8111502403638	109.93	1.6377	109.87	109.63	111.26	-0.055077					173	65	5	0	0	0	0.86348	1	11960	11960		31.53	0	1	6827300			10882	5550	7678	7686	12410	12410					0.05004236600166223
GHLQPMKPIL	10	Unmodified	_GHLQPMKPIL_					0	0	0			REV__ENST00000496543.1_1_2:190636495-190638623:-|nuORF	REV__ENST00000496543.1_1_2:190636495-190638623:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3258666992188	2	567.328619	1132.64269	0.27026	0.00015333	2.1429	0.0012157	2.4131	0.001369	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.85934	1	11271	11271		35.618	1.4457	1	6007000	+		10883	18790	7679	7687	12411	12411					0.08166941767581193
GHLSANLN	8	Unmodified	_GHLSANLN_					0	0	0		ENST00000490770.5_1_1:155110767-155110920:+|nuORF	ENST00000490770.5_1_1:155110767-155110920:+|nuORF	ENST00000490770.5_1_1:155110767-155110920:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.23797607421875	2	413.214309	824.414065	-1.3468	-0.0005565	4.4362	0.0018331	3.0894	0.0012766	413.2158820740582	76.744	0.28694	76.744	76.584	76.871	0					11	10	2	0	0	0	0.4196	1	6998	6998		51.335	20.832	1	23327			10884	12673	7680	7688	12412	12412					-0.005165144849684111
GHLVKNMKIK	10	Unmodified	_GHLVKNMKIK_					0	0	0		ENST00000478038.1_1_16:48612021-48612129:-|nuORF	ENST00000478038.1_1_16:48612021-48612129:-|nuORF	ENST00000478038.1_1_16:48612021-48612129:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.3564453125	2	584.355168	1166.69578	-0.79354	-0.00046371	2.158	0.001261	1.3645	0.00079733	584.356586051485	92.738	2.8775	92.808	91.472	94.349	0.06987					192	67	3	0	0	0	0.86201	1	9582	9582		24.203	0	1	594900			10885	12374	7681	7689	12413	12413					0.1191031955024755
GHLVTYGSEKS	11	Unmodified	_GHLVTYGSEKS_					0	0	0			REV__ENST00000478000.5_1_7:938560-944975:-|nuORF	REV__ENST00000478000.5_1_7:938560-944975:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.4918212890625	2	589.296027	1176.5775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.204	1	50.233	49.733	50.733	0.029629								0	0	0	0.56276	1	3930	3930		35.152	4.8343	1		+		10886	17585	7682	7690	12414	12414					-0.00372381224565288
GHMADIRIKLR	11	Unmodified	_GHMADIRIKLR_					0	0	0			REV__nc|ENSG00000079739|P36871-3|PGM1	REV__nc|ENSG00000079739|P36871-3|PGM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.59197998046875	3	437.255563	1308.74486	2.3979	0.0010485	1.5911	0.00069571	3.989	0.0017442	437.25617297786823	99.22	2.8692	99.166	98.246	101.11	-0.053734					176	66	3	0	0	0	0.72374	1	10722	10722		27.644	0.89421	1	988170	+		10887	16791	7683	7691	12415	12415					0.10283607839187425
GHMADIRIKLR	11	Unmodified	_GHMADIRIKLR_					0	0	0			REV__nc|ENSG00000079739|P36871-3|PGM1	REV__nc|ENSG00000079739|P36871-3|PGM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2566833496094	3	437.255563	1308.74486	0.72446	0.00031677	3.3633	0.0014706	4.0878	0.0017874	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.67762	1	10229	10229		35.178	1.0917	1	670840	+		10888	16791	7683	7691	12416	12416					0.10283607839187425
GHMIFITLLF	10	Unmodified	_GHMIFITLLF_					0	0	0			REV__ENSG00000198691|ENST00000370225|ABCA4	REV__ENSG00000198691|ENST00000370225|ABCA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3329467773438	2	596.33337	1190.65219	-0.50602	-0.00030176	-0.4543	-0.00027091	-0.96032	-0.00057267	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.86452	1	10261	10261		30.504	0.18592	1	1259900	+		10889	23357	7684	7692	12417	12417					0.0644871005308687
GHNKKVSGI	9	Unmodified	_GHNKKVSGI_					0	0	0			REV__ENSG00000130052|ENST00000374599|STARD8	REV__ENSG00000130052|ENST00000374599|STARD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.27215576171875	2	470.272158	938.529764	-0.95275	-0.00044805	0.77303	0.00036353	-0.17972	-8.4519E-05	470.2725133090264	92.093	2.8487	92.314	91.222	94.07	0.22157					155	67	4	0	0	0	0.7932	1	9319	9319		25.574	1.07	1	1872200	+		10890	18844	7685	7693	12418	12418					0.05804009365908769
GHNKLLRKTP	10	Unmodified	_GHNKLLRKTP_					0	0	0			REV__ENST00000553700.5_2_14:31675086-31676852:-|nuORF	REV__ENST00000553700.5_2_14:31675086-31676852:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.353759765625	2	582.354014	1162.69348	0.15817	9.2113E-05	-1.1126	-0.00064794	-0.95444	-0.00055582	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.86272	1	11425	11425		24.519	0.99649	1	78004000	+		10891	28653	7686	7694	12419	12419					0.11863607136797327
GHNKLLRKTP	10	Unmodified	_GHNKLLRKTP_					0	0	0			REV__ENST00000553700.5_2_14:31675086-31676852:-|nuORF	REV__ENST00000553700.5_2_14:31675086-31676852:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.353759765625	2	582.354014	1162.69348	2.7406	0.001596	-3.1524	-0.0018358	-0.4118	-0.00023981	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.8651	1	12664	12664		25.574	2.0514	1	7862700	+		10892	28653	7686	7694	12420	12420					0.11863607136797327
GHNNMPLGP	9	Unmodified	_GHNNMPLGP_					0	0	0			REV__nc|ENSG00000171503|Q16134-3|ETFDH	REV__nc|ENSG00000171503|Q16134-3|ETFDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7237854003906	2	468.721444	935.428335	1.3522	0.00063381	2.4637	0.0011548	3.8159	0.0017886	468.72262841523417	99.997	1.1906	100.33	99.811	101	0.33295					64	29	4	0	0	0	0.7932	1	12068	12068		25.45	3.4903	1	1305900	+		10893	21742	7687	7695	12421	12421					-0.04196185328316915
GHNNMPLGP	9	Unmodified	_GHNNMPLGP_					0	0	0			REV__nc|ENSG00000171503|Q16134-3|ETFDH	REV__nc|ENSG00000171503|Q16134-3|ETFDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7233581542969	2	468.721444	935.428335	1.5416	0.00072257	2.4315	0.0011397	3.973	0.0018622	468.7225776858063	103.87	1.2091	104.06	103.68	104.89	0.18887					87	29	4	0	0	0	0.7932	1	12646	12646		25.45	2.4077	1	1879100	+		10894	21742	7687	7695	12422	12422					-0.04196185328316915
GHNNMPLGP	9	Unmodified	_GHNNMPLGP_					0	0	0			REV__nc|ENSG00000171503|Q16134-3|ETFDH	REV__nc|ENSG00000171503|Q16134-3|ETFDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232971191406	2	468.721444	935.428335	2.8837	0.0013516	1.0142	0.00047539	3.8979	0.001827	468.7218949032731	103.72	1.0883	103.99	103.67	104.76	0.26524					69	25	4	0	0	0	0.7932	1	12673	12673		25.45	2.4077	1	2233300	+		10895	21742	7687	7695	12423	12423					-0.04196185328316915
GHNSVLIGNL	10	Unmodified	_GHNSVLIGNL_					0	0	0			REV__ENSG00000101323|ENST00000378789|HAO1	REV__ENSG00000101323|ENST00000378789|HAO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2821044921875	2	512.282723	1022.55089	-1.5312	-0.00078441	-1.1667	-0.00059769	-2.6979	-0.0013821	512.2820384248688	86.195	3.9563	86.353	85.285	89.241	0.15851					164	92	2	0	0	0	0.8545	1	8442	8442		36.447	0.82846	1	356130	+		10896	17265	7688	7696	12424	12424					0.040519746747804675
GHNTARAL	8	Unmodified	_GHNTARAL_					0	0	0			REV__ENST00000316084.9_1_X:71492477-71493137:-|nuORF	REV__ENST00000316084.9_1_X:71492477-71493137:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2274169921875	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.87064	1	7833	7833		29.15	0.89528	1	888480	+		10897	24950	7689	7697	12425	12425					0.015265941262214255
GHPDQPLPRE	10	Unmodified	_GHPDQPLPRE_					0	0	0		nc|ENSG00000144488|Q6ZVH7-2|ESPNL;ENSG00000144488|ENST00000343063|ESPNL;nc|ENSG00000144488|Q6ZVH7-3|ESPNL	nc|ENSG00000144488|Q6ZVH7-2|ESPNL	nc|ENSG00000144488|Q6ZVH7-2|ESPNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.2861328125	2	573.288537	1144.56252	0.11081	6.3529E-05	-3.5476	-0.0020338	-3.4368	-0.0019703	573.2864109055901	20.889	0.68782	20.261	19.943	20.631	-0.62835					29	17	2	0	0	0	0.76096	1	731	731		41.427	1.3684	1	355890			10898	4713	7690	7698	12426	12426					-0.003978283019023365
GHPGHVSSYSA	11	Unmodified	_GHPGHVSSYSA_					0	0	0		nc|ENSG00000100146|P56693|SOX10	nc|ENSG00000100146|P56693|SOX10	nc|ENSG00000100146|P56693|SOX10	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.7557373046875	2	549.751787	1097.48902	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.672	1	76.236	75.736	76.736	0.56458								0	0	0	0.56276	1	8598	8598		31.53	1.0262	1				10899	14807	7691	7699	12427	12427					-0.055823767443826
GHPILLHLPH	10	Unmodified	_GHPILLHLPH_					0	0	0			REV__ENST00000548511.5_1_12:88439351-88442196:+|nuORF	REV__ENST00000548511.5_1_12:88439351-88442196:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3294067382812	2	567.33255	1132.65055	-1.3957	-0.00079181	-3.4705	-0.0019689	-4.8662	-0.0027608	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86786	1	9720	9720		26.796	1.222	1	17338000	+		10900	19088	7692	7700	12428	12428					0.08952837079368692
GHPILPGSRR	10	Unmodified	_GHPILPGSRR_					0	0	0			REV__ENST00000495183.5_1_6:29910749-29913287:+|nuORF	REV__ENST00000495183.5_1_6:29910749-29913287:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.31689453125	2	545.317432	1088.62031	1.9901	0.0010853	-3.3293	-0.0018155	-1.3392	-0.00073027	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.74274	1	9131	9131		42.396	1.618	1	4704900	+		10901	27731	7693	7701	12429	12429					0.07954478414194455
GHPKTELQW	9	Unmodified	_GHPKTELQW_					0	0	0			REV__ENST00000554859.1_1_14:102262905-102263151:-|nuORF	REV__ENST00000554859.1_1_14:102262905-102263151:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.2789916992188	2	548.282723	1094.55089	-1.4657	-0.00080363	-1.6547	-0.00090726	-3.1204	-0.0017109	548.281610390018	34.409	0.47747	34.409	34.138	34.615	0					16	11	2	0	0	0	0.76764	1	1853	1853		34.173	1.422	1	58850	+		10902	28672	7694	7702	12430	12430					0.00739974674752375
GHPRKSAS	8	Unmodified	_GHPRKSAS_					0	0	0		nc|ENSG00000196323|Q8NCP5-4|ZBTB44	nc|ENSG00000196323|Q8NCP5-4|ZBTB44	nc|ENSG00000196323|Q8NCP5-4|ZBTB44	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2276916503906	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.89962	1	8136	8136		38.806	10.552	1	888480			10903	15180	7695	7703	12431	12431					0.015265941262327942
GHPRKSAS	8	Unmodified	_GHPRKSAS_					0	0	0		nc|ENSG00000196323|Q8NCP5-4|ZBTB44	nc|ENSG00000196323|Q8NCP5-4|ZBTB44	nc|ENSG00000196323|Q8NCP5-4|ZBTB44	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2277526855469	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.89494	1	8016	8016		37.159	6.6555	1	961790			10904	15180	7695	7703	12432	12432					0.015265941262327942
GHPRKSAS	8	Unmodified	_GHPRKSAS_					0	0	0		nc|ENSG00000196323|Q8NCP5-4|ZBTB44	nc|ENSG00000196323|Q8NCP5-4|ZBTB44	nc|ENSG00000196323|Q8NCP5-4|ZBTB44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.22760009765625	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.87479	2	7380	7380;7633		51.335	12.529	1	831720			10905	15180	7695	7703	12433;12434	12433					0.015265941262327942
GHPRKSAS	8	Unmodified	_GHPRKSAS_					0	0	0		nc|ENSG00000196323|Q8NCP5-4|ZBTB44	nc|ENSG00000196323|Q8NCP5-4|ZBTB44	nc|ENSG00000196323|Q8NCP5-4|ZBTB44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2269592285156	2	420.227751	838.440949	-1.4714	-0.00061832	1.6677	0.00070082	0.19633	8.2505E-05	420.22834377301643	76.819	2.0914	76.909	74.945	77.036	0.089363					112	66	2	0	0	0	0.87479	1	7054	7054		30.504	0	1	246920			10906	15180	7695	7703	12435	12435					0.015265941262327942
GHPRKSAS	8	Unmodified	_GHPRKSAS_					0	0	0		nc|ENSG00000196323|Q8NCP5-4|ZBTB44	nc|ENSG00000196323|Q8NCP5-4|ZBTB44	nc|ENSG00000196323|Q8NCP5-4|ZBTB44	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.22735595703125	2	420.227751	838.440949	0.39025	0.000164	-0.22921	-9.6321E-05	0.16104	6.7675E-05	420.2275761359418	78.73	4.4768	79.141	77.509	81.986	0.4106					178	106	2	0	0	0	0.87479	1	9108	9108		30.504	5.0535	1	423290			10907	15180	7695	7703	12436	12436					0.015265941262327942
GHPRPRPRPP	10	Unmodified	_GHPRPRPRPP_					0	0	0			REV__ENST00000373896.7_2_9:123636327-123639570:-|nuORF	REV__ENST00000373896.7_2_9:123636327-123639570:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	584.3563232421875	2	583.836323	1165.65809	-0.42666	-0.0002491	-0.85594	-0.00049973	-1.2826	-0.00074882	583.8367891701117	92.919	0.26	92.919	92.721	92.981	0					7	5	2	0	0	0	0.37624	1	9148	9148		42.396	25.031	1	30893	+		10908	25774	7696	7704	12437	12437					0.08188989399650382
GHPRRLKV	8	Unmodified	_GHPRRLKV_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1;ENST00000584897.5_1_18:2726458-2784452:+|nuORF;ENST00000609587.1_1_18:2728435-2728615:+|nuORF	nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENST00000609587.1_1_18:2728435-2728615:+|nuORF	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.9552307128906	2	481.80396	961.593367	1.0252	0.00049396	-3.4536	-0.001664	-2.4284	-0.00117	481.80217142139685	19.001	0.38171	18.524	18.311	18.693	-0.47694					12	8	2	0	0	0	0.4196	1	445	445		24.203	7.7296	1	15874			10909	1951;14486	7697	7705	12438	12438					0.11103414593662819
GHPRRLLLAS	10	Unmodified	_GHPRRLLLAS_					0	0	0			REV__ENSG00000206557|ENST00000383763|TRIM71	REV__ENSG00000206557|ENST00000383763|TRIM71	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.341064453125	2	560.340907	1118.66726	-1.4185	-0.00079484	0.46581	0.00026101	-0.95269	-0.00053383	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.8651	1	12344	12344		25.574	2.0514	1	4071000	+		10910	23592	7698	7706	12439	12439					0.1126733796534154
GHQGEQGL	8	Unmodified	_GHQGEQGL_					0	0	0		ENSG00000065618|ENST00000648076|COL17A1	ENSG00000065618|ENST00000648076|COL17A1	ENSG00000065618|ENST00000648076|COL17A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.1943664550781	2	413.196116	824.37768	-1.6019	-0.00066191	-4.2995	-0.0017765	-5.9014	-0.0024384	413.19424248280797	78.75	3.0447	78.844	78.417	81.462	0.0942					181	92	2	0	0	0	0.89962	1	7436	7436		38.806	1.7777	1	856750			10911	1136	7699	7707	12440	12440					-0.041533913816579116
GHQGPQRPVK	10	Unmodified	_GHQGPQRPVK_					0	0	0		ENSG00000084092|ENST00000264230|NOA1	ENSG00000084092|ENST00000264230|NOA1	ENSG00000084092|ENST00000264230|NOA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3065795898438	2	552.307064	1102.59957	1.2817	0.0007079	-2.5363	-0.0014008	-1.2546	-0.00069293	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.80179	1	9655	9655		39.253	1.4413	1	1712700			10912	1511	7700	7708	12441	12441					0.052378880345031575
GHQGPQRPVK	10	Unmodified	_GHQGPQRPVK_					0	0	0		ENSG00000084092|ENST00000264230|NOA1	ENSG00000084092|ENST00000264230|NOA1	ENSG00000084092|ENST00000264230|NOA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.3060913085938	2	552.307064	1102.59957	0.7768	0.00042903	-1.8432	-0.001018	-1.0664	-0.00058896	552.3060097260034	92.551	2.2776	92.998	91.922	94.2	0.44661					137	53	3	0	0	0	0.86718	1	10929	10929		27.882	3.3631	1	579750			10913	1511	7700	7708	12442	12442					0.052378880345031575
GHQKARPRL	9	Unmodified	_GHQKARPRL_					0	0	0		ENST00000407450.1_1_6:118775621-118775846:-|nuORF	ENST00000407450.1_1_6:118775621-118775846:-|nuORF	ENST00000407450.1_1_6:118775621-118775846:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.81689453125	2	531.817599	1061.62064	1.0296	0.00054754	-2.3934	-0.0012729	-1.3639	-0.00072533	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.7932	1	8875	8875		24.203	0.68005	1	1241100			10914	11287	7701	7709	12443	12443					0.09229898134026371
GHQTSVTH	8	Unmodified	_GHQTSVTH_					0	0	0		ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.7095031738281	2	433.709391	865.404229	-0.4049	-0.00017561	0.73237	0.00031764	0.32747	0.00014203	433.7095747053112	18.885	1.2564	18.812	18.502	19.759	-0.073704					78	36	3	0	0	0	0.35733	1	345	345		83.287	6.4406	1	1229300			10915	8653	7702	7710	12444	12444					-0.033857024903227284
GHQTSVTH	8	Unmodified	_GHQTSVTH_					0	0	0		ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.70904541015625	2	433.709391	865.404229	2.0792	0.00090175	-1.7988	-0.00078014	0.2804	0.00012161	433.70846338863225	18.813	1.3077	18.738	18.445	19.753	-0.074974					100	50	3	0	0	0	0.36381	3	363	359;363;374		82.305	13.82	1	1070700			10916	8653	7702	7710	12445;12446;12447	12446					-0.033857024903227284
GHQTSVTH	8	Unmodified	_GHQTSVTH_					0	0	0		ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7093505859375	2	433.709391	865.404229	0.5343	0.00023173	-0.18636	-8.0824E-05	0.34795	0.00015091	433.70913386573756	19.147	1.0323	18.677	18.365	19.397	-0.46967					46	22	3	0	0	0	0.84634	1	478	478		60.294	6.9425	1	348870			10917	8653	7702	7710	12448	12448					-0.033857024903227284
GHRFVLAVF	9	Unmodified	_GHRFVLAVF_					0	0	0			REV__nc|ENSG00000142513|Q9BZG2-2|ACP4	REV__nc|ENSG00000142513|Q9BZG2-2|ACP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3035888671875	2	523.300719	1044.58688	1.1935	0.00062456	4.3216	0.0022615	5.5151	0.002886	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.7932	1	10772	10772		24.203	0.68005	1	11944000	+		10918	19741	7703	7711	12449	12449					0.06637476642254114
GHRGILGLLIV	11	Unmodified	_GHRGILGLLIV_					0	0	0			REV__ENST00000537619.6_1_12:71058179-71058296:-|nuORF	REV__ENST00000537619.6_1_12:71058179-71058296:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3693237304688	2	574.369133	1146.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.432	1	15.481	14.981	15.981	0.04908								0	0	0	0.56276	1	46	46		16.473	0.83134	1		+		10919	28423	7704	7712	12450	12450					0.15621965801983606
GHRLEPGPQ	9	Unmodified	_GHRLEPGPQ_					0	0	0			REV__ENST00000574356.5_1_17:80674699-80676798:+|nuORF	REV__ENST00000574356.5_1_17:80674699-80676798:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.7591552734375	2	495.759415	989.504277	-1.9425	-0.00096301	2.7963	0.0013863	0.85379	0.00042327	495.7602537576442	19.302	1.1114	19.302	18.834	19.945	0					76	43	2	0	0	0	0.77696	1	427	427		31.53	3.6476	1	56551	+		10920	28971	7705	7713	12451	12451					0.00910534843478672
GHRPRGPVL	9	Unmodified	_GHRPRGPVL_					0	0	0		ENST00000275732.5_1_7:100278784-100278913:-|nuORF	ENST00000275732.5_1_7:100278784-100278913:-|nuORF	ENST00000275732.5_1_7:100278784-100278913:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.79278564453125	2	494.793592	987.572632	0.53507	0.00026475	-1.5837	-0.00078362	-1.0487	-0.00051887	494.7926397196607	26.556	0.66258	26.601	26.257	26.92	0.045507					37	18	3	0	0	0	0.77546	1	1156	1156		31.955	1.4512	1	91230			10921	9598	7706	7714	12452	12452					0.07834824213978209
GHRQTLHRPL	10	Unmodified	_GHRQTLHRPL_					0	0	0		chr6:35469027-35469315|26|23.23|0.75|4.96|+|0|RPL10A,None|1	chr6:35469027-35469315|26|23.23|0.75|4.96|+|0|RPL10A,None|1	chr6:35469027-35469315|26|23.23|0.75|4.96|+|0|RPL10A,None|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5646667480469	3	405.567017	1213.67922	-1.5366	-0.00062318	-3.8204	-0.0015494	-5.357	-0.0021726	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.85633	1	5578	5578		21.686	0.65352	1	187890			10922	478	7707	7715	12453	12453					0.08092954708490652
GHRQVVPRP	9	Unmodified	_GHRQVVPRP_					0	0	0		ENST00000395694.6_2_3:48474164-48474227:-|nuORF	ENST00000395694.6_2_3:48474164-48474227:-|nuORF	ENST00000395694.6_2_3:48474164-48474227:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3032836914062	2	523.304324	1044.5941	-0.041393	-2.1661E-05	-1.4838	-0.00077647	-1.5252	-0.00079813	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.72402	1	8805	8805		38.806	0	1	3850300			10923	11098	7708	7716	12454	12454					0.0735820924271593
GHRQVVPRP	9	Unmodified	_GHRQVVPRP_					0	0	0		ENST00000395694.6_2_3:48474164-48474227:-|nuORF	ENST00000395694.6_2_3:48474164-48474227:-|nuORF	ENST00000395694.6_2_3:48474164-48474227:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3034057617188	2	523.304324	1044.5941	1.4247	0.00074556	-2.9989	-0.0015693	-1.5742	-0.00082377	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.78058	1	8934	8934		30.504	1.3336	1	3882100			10924	11098	7708	7716	12455	12455					0.0735820924271593
GHRQVVPRP	9	Unmodified	_GHRQVVPRP_					0	0	0		ENST00000395694.6_2_3:48474164-48474227:-|nuORF	ENST00000395694.6_2_3:48474164-48474227:-|nuORF	ENST00000395694.6_2_3:48474164-48474227:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.304324	1044.5941	1.0264	0.00053713	-2.6027	-0.001362	-1.5763	-0.00082486	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.78058	1	8653	8653		30.504	0.18592	1	3817300			10925	11098	7708	7716	12456	12456					0.0735820924271593
GHSAFSVALI	10	Unmodified	_GHSAFSVALI_					0	0	0		ENSG00000138459|ENST00000492406|SLC35A5	ENSG00000138459|ENST00000492406|SLC35A5	ENSG00000138459|ENST00000492406|SLC35A5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29034423828125	2	501.274367	1000.53418	-0.41575	-0.00020841	-2.5333	-0.0012699	-2.9491	-0.0014783	501.2736490135184	86.572	0.61038	87.027	86.775	87.385	0.4543					31	14	3	0	0	0	0.37624	1	10156	10156		44.117	14.967	1	164220			10926	4298	7709	7717	12457	12457					0.03393473788821666
GHSAKAEVRRE	11	Unmodified	_GHSAKAEVRRE_					0	0	0			REV__nc|ENSG00000260220|A0A096LP49-2|CCDC187	REV__nc|ENSG00000260220|A0A096LP49-2|CCDC187	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2512512207031	3	413.889937	1238.64798	1.5881	0.00065732	-3.4757	-0.0014385	-1.8875	-0.00078123	414.2215067291908	24.209	0.64772	23.695	23.408	24.055	-0.51365					22	14	2	0	0	0	0.17648	1	1202	1202		26.75	5.064	1	58991	+		10927	23936	7710	7718	12458	12458					0.03820336883768505
GHSAPPFV	8	Unmodified	_GHSAPPFV_					0	0	0		ENSG00000176925|ENST00000322110|OR51F2;nc|ENSG00000176925|Q8NH61|OR51F2	ENSG00000176925|ENST00000322110|OR51F2	ENSG00000176925|ENST00000322110|OR51F2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24859619140625	2	406.208495	810.402438	-1.1708	-0.0004756	3.5137	0.0014273	2.3429	0.00095171	406.2101741125546	88.535	0.87768	88.535	88.38	89.258	0					27	20	2	0	0	0	0.4196	1	8508	8508		39.021	17.319	1	88031			10928	7104	7711	7719	12459	12459					-0.010347115082822711
GHSDKRED	8	Unmodified	_GHSDKRED_					0	0	0		ENST00000470521.1_1_1:222791452-222819114:+|nuORF;nc|ENSG00000154305|Q5JRA6-2|MIA3;ENSG00000154305|ENST00000344922|MIA3	ENST00000470521.1_1_1:222791452-222819114:+|nuORF	ENST00000470521.1_1_1:222791452-222819114:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2875061035156	2	472.215037	942.415522	0.72399	0.00034188	-2.368	-0.0011182	-1.644	-0.00077632	472.2137058171607	95.098	0.56253	95.261	94.99	95.553	0.16307					17	13	2	0	0	0	0.4196	1	9757	9757		37.159	8.0096	1	110540			10929	5272	7712	7720	12460	12460					-0.05798925186854831
GHSDRIFDI	9	Unmodified	_GHSDRIFDI_					0	0	0		nc|ENSG00000214595|Q6ZMW3-2|EML6;ENSG00000214595|ENST00000356458|EML6	nc|ENSG00000214595|Q6ZMW3-2|EML6	nc|ENSG00000214595|Q6ZMW3-2|EML6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8204956054688	2	530.26453	1058.51451	0.091053	4.8282E-05	-1.2129	-0.00064316	-1.1219	-0.00059488	530.2637525355456	81.746	0.50417	82.246	81.993	82.497	0.49967					18	12	2	0	0	0	0.20789	1	9427	9427		20.947	10.762	1	176810			10930	15250	7713	7721	12461	12461					-0.012409022219571852
GHSEKLPLIL	10	Unmodified	_GHSEKLPLIL_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8295288085938	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.54701	1	8713	8713		52.937	20.124	1	1844500			10931	5428	7714	7722	12462	12462					0.10094577919812764
GHSEKLPLIL	10	Unmodified	_GHSEKLPLIL_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.830078125	2	553.832049	1105.64954	-1.2274	-0.00067979	-2.3284	-0.0012895	-3.5558	-0.0019693	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.77314	1	10417	10417		40.778	1.5253	1	1825600			10932	5428	7714	7722	12463	12463					0.10094577919812764
GHSGGVGRL	9	Unmodified	_GHSGGVGRL_					0	0	0			REV__ENSG00000076043|ENST00000265881|REXO2	REV__ENSG00000076043|ENST00000265881|REXO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2277526855469	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.76255	1	7389	7389		35.618	2.1027	1	831720	+		10933	16721	7715	7723	12464	12464					0.015265941262214255
GHSLPGVLE	9	Unmodified	_GHSLPGVLE_					0	0	0		ENST00000525139.5_1_11:26581321-26620424:+|nuORF	ENST00000525139.5_1_11:26581321-26620424:+|nuORF	ENST00000525139.5_1_11:26581321-26620424:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.7447814941406	2	454.745442	907.476331	-0.13391	-6.0896E-05	-0.83302	-0.00037881	-0.96693	-0.00043971	454.7449043410658	103.95	1.6099	103.94	103.26	104.87	-0.0035706					76	38	3	0	0	0	0.78058	1	11232	11232		30.504	1.3541	1	761390			10934	13230	7716	7724	12465	12465					0.01889211863374385
GHSNLTTH	8	Unmodified	_GHSNLTTH_					0	0	0		ENSG00000170949|ENST00000683776|ZNF160	ENSG00000170949|ENST00000683776|ZNF160	ENSG00000170949|ENST00000683776|ZNF160	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.7093505859375	2	433.709391	865.404229	0.55686	0.00024152	-0.39028	-0.00016927	0.16658	7.2246E-05	433.7090980186714	18.671	0.81115	18.647	18.359	19.17	-0.024035					70	36	3	0	0	0	0.84634	1	360	360		60.294	0	1	629030			10935	6626	7717	7725	12466	12466					-0.03385702490345466
GHSQKKGK	8	Unmodified	_GHSQKKGK_					0	0	0		ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25152587890625	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.88185	1	7768	7768		32.812	2.3088	1	2743300			10936	4987	7718	7726	12467	12467					0.04839453677379879
GHSRKKANIAI	11	Unmodified	_GHSRKKANIAI_					0	0	0		nc|ENSG00000164251|P55085|F2RL1;ENSG00000164251|ENST00000296677|F2RL1	nc|ENSG00000164251|P55085|F2RL1	nc|ENSG00000164251|P55085|F2RL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8560791015625	2	597.856921	1193.69929	-0.35529	-0.00021242	-0.43374	-0.00025932	-0.78904	-0.00047173	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.6921	1	9063	9063		32.812	1.2826	1	1224100			10937	5943	7719	7727	12468	12468					0.11018705648461946
GHSRKKANIAI	11	Unmodified	_GHSRKKANIAI_					0	0	0		nc|ENSG00000164251|P55085|F2RL1;ENSG00000164251|ENST00000296677|F2RL1	nc|ENSG00000164251|P55085|F2RL1	nc|ENSG00000164251|P55085|F2RL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8562622070312	2	597.856921	1193.69929	-0.32365	-0.0001935	0.21288	0.00012727	-0.11077	-6.6223E-05	598.3588954923197	94.611	4.9065	94.611	93.622	98.528	0					293	115	3	0	0	0	0.6921	1	9452	9452		32.812	1.2826	1	5706300			10938	5943	7719	7727	12469	12469					0.11018705648461946
GHSRKKANIAI	11	Unmodified	_GHSRKKANIAI_					0	0	0		nc|ENSG00000164251|P55085|F2RL1;ENSG00000164251|ENST00000296677|F2RL1	nc|ENSG00000164251|P55085|F2RL1	nc|ENSG00000164251|P55085|F2RL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8553466796875	2	597.856921	1193.69929	-0.56163	-0.00033577	-0.46706	-0.00027924	-1.0287	-0.00061501	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.65746	1	9832	9832		37.812	2.6595	1	6282800			10939	5943	7719	7727	12470	12470					0.11018705648461946
GHSRKKANIAI	11	Unmodified	_GHSRKKANIAI_					0	0	0		nc|ENSG00000164251|P55085|F2RL1;ENSG00000164251|ENST00000296677|F2RL1	nc|ENSG00000164251|P55085|F2RL1	nc|ENSG00000164251|P55085|F2RL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8560791015625	2	597.856921	1193.69929	-0.4308	-0.00025756	-0.72556	-0.00043378	-1.1564	-0.00069134	597.8562580242035	92.27	2.7665	92.315	90.514	93.28	0.045448					217	66	5	0	0	0	0.58425	1	9630	9630		45.972	3.108	1	1998300			10940	5943	7719	7727	12471	12471					0.11018705648461946
GHSRKKANIAI	11	Unmodified	_GHSRKKANIAI_					0	0	0		nc|ENSG00000164251|P55085|F2RL1;ENSG00000164251|ENST00000296677|F2RL1	nc|ENSG00000164251|P55085|F2RL1	nc|ENSG00000164251|P55085|F2RL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.856201171875	2	597.856921	1193.69929	0.93581	0.00055948	-2.1237	-0.0012697	-1.1879	-0.00071018	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.65746	1	9224	9224		37.812	2.1932	1	2638300			10941	5943	7719	7727	12472	12472					0.11018705648461946
GHSRKKANIAI	11	Unmodified	_GHSRKKANIAI_					0	0	0		nc|ENSG00000164251|P55085|F2RL1;ENSG00000164251|ENST00000296677|F2RL1	nc|ENSG00000164251|P55085|F2RL1	nc|ENSG00000164251|P55085|F2RL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.856201171875	2	597.856921	1193.69929	0.8216	0.0004912	-2.0016	-0.0011967	-1.18	-0.00070545	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.51007	1	9374	9374		51.193	6.8155	1	2486400			10942	5943	7719	7727	12473	12473					0.11018705648461946
GHSRKKANIAI	11	Unmodified	_GHSRKKANIAI_					0	0	0		nc|ENSG00000164251|P55085|F2RL1;ENSG00000164251|ENST00000296677|F2RL1	nc|ENSG00000164251|P55085|F2RL1	nc|ENSG00000164251|P55085|F2RL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8557739257812	2	597.856921	1193.69929	-1.2963	-0.00077498	0.15024	8.982E-05	-1.146	-0.00068516	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.68532	1	9256	9256		33.922	2.3918	1	2401200			10943	5943	7719	7727	12474	12474					0.11018705648461946
GHTEEPPGL	9	Unmodified	_GHTEEPPGL_					0	0	0		ENSG00000147246|ENST00000276198|HTR2C	ENSG00000147246|ENST00000276198|HTR2C	ENSG00000147246|ENST00000276198|HTR2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.72393798828125	2	468.724707	935.43486	-0.54669	-0.00025625	-2.2958	-0.0010761	-2.8425	-0.0013324	468.72358850102967	75.94	0.89275	76.509	76.184	77.077	0.56836					41	22	2	0	0	0	0.64922	1	8640	8640		44.117	12.162	1	404970			10944	4891	7720	7728	12475	12475					-0.03543968895951366
GHTGRLYRGNL	11	Unmodified	_GHTGRLYRGNL_					0	0	0			REV__nc|ENSG00000160339|Q15485-2|FCN2	REV__nc|ENSG00000160339|Q15485-2|FCN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3364868164062	2	622.336353	1242.65815	-0.073789	-4.5921E-05	0.18042	0.00011228	0.10664	6.6363E-05	622.3363752507829	111.19	1.2568	111.19	110.57	111.83	0					110	41	4	0	0	0	0.71803	1	11597	11597		8.6937	0	1	190840	+		10945	20714	7721	7729	12476	12476					0.04652944608983489
GHTGRLYRGNL	11	Unmodified	_GHTGRLYRGNL_					0	0	0			REV__nc|ENSG00000160339|Q15485-2|FCN2	REV__nc|ENSG00000160339|Q15485-2|FCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3358764648438	2	622.336353	1242.65815	-0.27733	-0.0001726	0.22676	0.00014112	-0.050579	-3.1477E-05	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.68431	1	12141	12141		18.262	0	1	419280	+		10946	20714	7721	7729	12477	12477					0.04652944608983489
GHTPLLMA	8	Unmodified	_GHTPLLMA_					0	0	0		ENST00000484742.5_2_1:156701802-156701985:+|nuORF	ENST00000484742.5_2_1:156701802-156701985:+|nuORF	ENST00000484742.5_2_1:156701802-156701985:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2274475097656	2	420.225831	838.437109	2.4843	0.001044	2.4469	0.0010283	4.9312	0.0020722	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.91005	1	7644	7644		42.474	1.9018	1	961790			10947	12543	7722	7730	12478	12478					0.011427883081637447
GHTPSCILTPD	11	Unmodified	_GHTPSCILTPD_					0	0	0			REV__nc|ENSG00000101096|Q13469-5|NFATC2	REV__nc|ENSG00000101096|Q13469-5|NFATC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	572.2752685546875	2	570.771331	1139.52811	-1.1049	-0.00063066	3.4764	0.0019842	2.3715	0.0013536	571.274141132759	57.911	0.8866	57.897	57.613	58.5	-0.013641					69	29	4	0	0	0	0.64498	1	5272	5272		39.253	1.4413	1	170530	+		10948	15780	7723	7731	12479	12479					-0.03607412505039065
GHTYATVV	8	Unmodified	_GHTYATVV_					0	0	0		ENSG00000155761|ENST00000336338|SPAG17	ENSG00000155761|ENST00000336338|SPAG17	ENSG00000155761|ENST00000336338|SPAG17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.2185974121094	2	424.21906	846.423567	-0.1837	-7.7928E-05	-1.1351	-0.00048152	-1.3188	-0.00055944	424.2185287134354	101.66	1.8082	101.68	101.04	102.85	0.01989					87	43	4	0	0	0	0.91005	1	10912	10912		42.474	2.4163	1	1878300			10949	5340	7724	7732	12480	12480					-0.005787461994373189
GHVISAKVF	9	Unmodified	_GHVISAKVF_					0	0	0		nc|ENSG00000159409|Q5SZQ8-4|CELF3;nc|ENSG00000159409|Q5SZQ8-3|CELF3;nc|ENSG00000159409|Q5SZQ8-2|CELF3;ENSG00000159409|ENST00000290583|CELF3	nc|ENSG00000159409|Q5SZQ8-4|CELF3	nc|ENSG00000159409|Q5SZQ8-4|CELF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.277587890625	2	479.279452	956.544351	-1.0919	-0.00052333	-3.0273	-0.0014509	-4.1192	-0.0019742	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.78536	1	8156	8156		29.15	1.2673	1	4644500			10950	5529	7725	7733	12481	12481					0.0643408151404401
GHVISAKVF	9	Unmodified	_GHVISAKVF_					0	0	0		nc|ENSG00000159409|Q5SZQ8-4|CELF3;nc|ENSG00000159409|Q5SZQ8-3|CELF3;nc|ENSG00000159409|Q5SZQ8-2|CELF3;ENSG00000159409|ENST00000290583|CELF3	nc|ENSG00000159409|Q5SZQ8-4|CELF3	nc|ENSG00000159409|Q5SZQ8-4|CELF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2773742675781	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.78536	2	8272	8069;8272		29.15	2.3082	1	7438100			10951	5529	7725	7733	12482;12483	12483					0.0643408151404401
GHVISAKVF	9	Unmodified	_GHVISAKVF_					0	0	0		nc|ENSG00000159409|Q5SZQ8-4|CELF3;nc|ENSG00000159409|Q5SZQ8-3|CELF3;nc|ENSG00000159409|Q5SZQ8-2|CELF3;ENSG00000159409|ENST00000290583|CELF3	nc|ENSG00000159409|Q5SZQ8-4|CELF3	nc|ENSG00000159409|Q5SZQ8-4|CELF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774658203125	2	479.279452	956.544351	-1.5678	-0.00075141	-2.7191	-0.0013032	-4.2869	-0.0020546	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.67345	2	8386	8181;8386		42.396	5.237	1	6441000			10952	5529	7725	7733	12484;12485	12485					0.0643408151404401
GHVKGKRKSGP	11	Unmodified	_GHVKGKRKSGP_					0	0	0			REV__ENSG00000239642|ENST00000442687|MEIKIN	REV__ENSG00000239642|ENST00000442687|MEIKIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8427734375	2	575.843813	1149.67307	0.80402	0.00046299	-2.4364	-0.001403	-1.6324	-0.00094001	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.73893	1	9361	9361		24.519	1.4767	1	6947200	+		10953	23805	7726	7734	12486	12486					0.10422436476960684
GHVLGRSGG	9	Unmodified	_GHVLGRSGG_					0	0	0			REV__ENSG00000101473|ENST00000217455|ACOT8	REV__ENSG00000101473|ENST00000217455|ACOT8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2296142578125	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.77244	1	7980	7980		32.812	2.3088	1	743780	+		10954	17284	7727	7735	12487	12487					0.015265941262327942
GHVLGRSGG	9	Unmodified	_GHVLGRSGG_					0	0	0			REV__ENSG00000101473|ENST00000217455|ACOT8	REV__ENSG00000101473|ENST00000217455|ACOT8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2271728515625	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.69624	2	7741	7741;8066		40.778	3.6476	1	888480	+		10955	17284	7727	7735	12488;12489	12488					0.015265941262327942
GHVLGRSGG	9	Unmodified	_GHVLGRSGG_					0	0	0			REV__ENSG00000101473|ENST00000217455|ACOT8	REV__ENSG00000101473|ENST00000217455|ACOT8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2274475097656	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.55097	3	7653	7653;7839;7991		49.442	5.1599	1	961790	+		10956	17284	7727	7735	12490;12491;12492	12490					0.015265941262327942
GHVLGRSGG	9	Unmodified	_GHVLGRSGG_					0	0	0			REV__ENSG00000101473|ENST00000217455|ACOT8	REV__ENSG00000101473|ENST00000217455|ACOT8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2276916503906	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.69624	1	7582	7582		40.778	5.1599	1	831720	+		10957	17284	7727	7735	12493	12493					0.015265941262327942
GHVLGRSGG	9	Unmodified	_GHVLGRSGG_					0	0	0			REV__ENSG00000101473|ENST00000217455|ACOT8	REV__ENSG00000101473|ENST00000217455|ACOT8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2276916503906	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.77244	1	7484	7484		32.812	3.6629	1	678130	+		10958	17284	7727	7735	12494	12494					0.015265941262327942
GHVLGRSGG	9	Unmodified	_GHVLGRSGG_					0	0	0			REV__ENSG00000101473|ENST00000217455|ACOT8	REV__ENSG00000101473|ENST00000217455|ACOT8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2271728515625	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.69624	1	7274	7274		40.778	1.972	1	634680	+		10959	17284	7727	7735	12495	12495					0.015265941262327942
GHVLLLNALL	10	Unmodified	_GHVLLLNALL_					0	0	0			REV__ENSG00000179921|ENST00000519574|GPBAR1	REV__ENSG00000179921|ENST00000519574|GPBAR1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8170776367188	2	531.837134	1061.65972	1.8288	0.00097261	-4.0688	-0.0021639	-2.24	-0.0011913	532.3360626830682	88.704	0.11922	88.632	88.554	88.673	-0.07238					4	2	2	0	0	0	0.37624	1	9229	9229		30.504	15.84	1	20830	+		10960	22366	7728	7736	12496	12496					0.13135185645046477
GHVQRPEL	8	Unmodified	_GHVQRPEL_					0	0	0		ENST00000370996.4_1_20:58514954-58515329:-|nuORF	ENST00000370996.4_1_20:58514954-58515329:-|nuORF	ENST00000370996.4_1_20:58514954-58515329:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.2548522949219	2	468.256508	934.498464	-1.1861	-0.00055538	-2.7398	-0.0012829	-3.9258	-0.0018383	468.2551087994404	82.125	3.0486	82.125	81.258	84.307	0					145	81	2	0	0	0	0.89962	1	7677	7677		38.806	6.8513	1	128510			10961	10654	7729	7737	12497	12497					0.0285943633180068
GHVRKPDGN	9	Unmodified	_GHVRKPDGN_					0	0	0			REV__ENST00000572680.1_1_17:7219444-7221143:-|nuORF	REV__ENST00000572680.1_1_17:7219444-7221143:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.2578430175781	2	490.25704	978.499526	4.4093	0.0021617	-2.5356	-0.0012431	1.8736	0.00091856	490.2556618815464	107.13	2.0845	107.27	105.83	107.92	0.14929					167	83	3	0	0	0	0.78124	1	13108	13108		30.318	1.1682	1	1494000	+		10962	28949	7730	7738	12498	12498					0.009416507007017572
GHVTPLPVTSL	11	Unmodified	_GHVTPLPVTSL_					0	0	0		nc|ENSG00000145113|Q99102-9|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-10|MUC4;ENSG00000145113|ENST00000463781|MUC4	nc|ENSG00000145113|Q99102-9|MUC4	nc|ENSG00000145113|Q99102-9|MUC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8198852539062	2	560.821681	1119.62881	-1.4169	-0.00079462	-1.874	-0.001051	-3.2909	-0.0018456	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.6921	1	9222	9222		32.812	3.6629	1	758020			10963	4748	7731	7739	12499	12499					0.07377987540144204
GHWDTVLQAIQ	11	Unmodified	_GHWDTVLQAIQ_					0	0	0		ENST00000379752.5_1_1:157030233-157030518:-|nuORF;ENSG00000122692|ENST00000397149|SMU1	ENST00000379752.5_1_1:157030233-157030518:-|nuORF;ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.330078125	2	634.325119	1266.63569	1.4146	0.00089732	-1.0866	-0.00068923	0.32804	0.00020809	634.3243337496912	59.344	1.2629	59.438	58.987	60.25	0.094063					106	40	4	0	0	0	0.37012	1	5122	5122		61.691	2.9093	1	2187100			10964	3240;10902	7732	7740	12500	12500					0.013033004207045451
GHWDTVLQAIQ	11	Unmodified	_GHWDTVLQAIQ_					0	0	0		ENST00000379752.5_1_1:157030233-157030518:-|nuORF;ENSG00000122692|ENST00000397149|SMU1	ENST00000379752.5_1_1:157030233-157030518:-|nuORF;ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3259887695312	2	634.325119	1266.63569	1.6756	0.0010629	-1.4247	-0.00090371	0.25091	0.00015916	634.3241495458176	57.188	1.611	57.743	57.355	58.966	0.55512					111	39	4	0	0	0	0.33509	1	5924	5924		65.465	5.3471	1	5227300			10965	3240;10902	7732	7740	12501	12501					0.013033004207045451
GHYYDASKR	9	Unmodified	_GHYYDASKR_					0	0	0		ENSG00000109911|ENST00000640961|ELP4;nc|ENSG00000109911|Q96EB1-3|ELP4;nc|ENSG00000109911|Q96EB1-2|ELP4	ENSG00000109911|ENST00000640961|ELP4	ENSG00000109911|ENST00000640961|ELP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.761474609375	2	548.762155	1095.50976	0.34454	0.00018907	-3.9315	-0.0021574	-3.5869	-0.0019684	548.7599336617226	17.083	0.13922	17.003	16.915	17.055	-0.079056					7	4	2	0	0	0	0.78983	1	183	183		27.882	4.3595	1	23037			10966	2490	7733	7741	12502	12502					-0.03417786364730091
GHYYDASKR	9	Unmodified	_GHYYDASKR_					0	0	0		ENSG00000109911|ENST00000640961|ELP4;nc|ENSG00000109911|Q96EB1-3|ELP4;nc|ENSG00000109911|Q96EB1-2|ELP4	ENSG00000109911|ENST00000640961|ELP4	ENSG00000109911|ENST00000640961|ELP4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	548.762155	1095.50976	0.58882	0.00032312	-3.6371	-0.0019959	-3.0483	-0.0016728	548.7595467777563	16.529	0.3032	16.607	16.475	16.778	0.07715	-0.24655	0.00093129	NaN	27.882	12	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17920			10967	2490	7733	7741							-0.03417786364730091
GHYYDASKR	9	Unmodified	_GHYYDASKR_					0	0	0		ENSG00000109911|ENST00000640961|ELP4;nc|ENSG00000109911|Q96EB1-3|ELP4;nc|ENSG00000109911|Q96EB1-2|ELP4	ENSG00000109911|ENST00000640961|ELP4	ENSG00000109911|ENST00000640961|ELP4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	548.762155	1095.50976	1.036	0.00056853	-5.0322	-0.0027615	-3.9962	-0.002193	548.7595061861587	17.031	0.21677	16.949	16.836	17.053	-0.0821	0.096129	-0.0005999	NaN	27.882	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16830			10968	2490	7733	7741							-0.03417786364730091
GIAAKIPR	8	Unmodified	_GIAAKIPR_					0	0	0			REV__nc|ENSG00000151849|Q9HC77-2|CENPJ	REV__nc|ENSG00000151849|Q9HC77-2|CENPJ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2692565917969	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.81548	1	2241	2241		20.482	2.1574	1	268720	+		10969	20273	7734	7742	12503	12503					0.10394116205179671
GIAAKIPR	8	Unmodified	_GIAAKIPR_					0	0	0			REV__nc|ENSG00000151849|Q9HC77-2|CENPJ	REV__nc|ENSG00000151849|Q9HC77-2|CENPJ	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7671203613281	2	413.268887	824.523222	0.16242	6.7124E-05	-1.5091	-0.00062368	-1.3467	-0.00055655	413.2682034631166	37.562	2.2059	37.661	35.983	38.189	0.099277					142	69	3	0	0	0	0.4196	1	2177	2177		54.765	10.234	1	615840	+		10970	20273	7734	7742	12504	12504					0.10394116205179671
GIAELIIAI	9	Unmodified	_GIAELIIAI_					0	0	0			REV__nc|ENSG00000115902|P43007-2|SLC1A4	REV__nc|ENSG00000115902|P43007-2|SLC1A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79315185546875	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.78851	1	1972	1972		28.254	1.4582	1	3484100	+		10971	18160	7735	7743	12505	12505					0.10984716596738053
GIAGSWPR	8	Unmodified	_GIAGSWPR_					0	0	0		ENST00000338660.5_1_1:1375524-1375638:+|nuORF	ENST00000338660.5_1_1:1375524-1375638:+|nuORF	ENST00000338660.5_1_1:1375524-1375638:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2282409667969	2	422.22722	842.439886	0.40511	0.00017105	1.6054	0.00067786	2.0105	0.00084891	422.2277865836404	64.332	1.1229	64.456	64.031	65.154	0.12397					101	41	4	0	0	0	0.91005	1	5636	5636		42.474	3.453	1	502100			10972	10207	7736	7744	12506	12506					0.012363797573243573
GIAKERRKRAH	11	Unmodified	_GIAKERRKRAH_					0	0	0			REV__nc|ENSG00000155846|Q86YN6-6|PPARGC1B	REV__nc|ENSG00000155846|Q86YN6-6|PPARGC1B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.9405517578125	3	441.268971	1320.78508	0.80882	0.00035691	-3.4805	-0.0015358	-2.6716	-0.0011789	441.2673918977261	54.076	1.3724	54.099	53.617	54.99	0.022537					87	41	3	0	0	0	0.1767	1	4895	4895		18.531	2.5243	1	169490	+		10973	20448	7737	7745	12507	12507					0.137522905539754
GIAKERRKRAH	11	Unmodified	_GIAKERRKRAH_					0	0	0			REV__nc|ENSG00000155846|Q86YN6-6|PPARGC1B	REV__nc|ENSG00000155846|Q86YN6-6|PPARGC1B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	441.268971	1320.78508	-0.65486	-0.00028897	-1.9597	-0.00086477	-2.6146	-0.0011537	441.268084947673	53.963	1.9699	53.938	52.863	54.833	-0.024754	-0.093749	0.00027485	NaN	18.531	101	53	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146640	+		10974	20448	7737	7745							0.137522905539754
GIAKILPNRIF	11	Unmodified	_GIAKILPNRIF_					0	0	0			REV__ENST00000545710.1_1_12:9659830-9660388:-|nuORF	REV__ENST00000545710.1_1_12:9659830-9660388:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3934326171875	2	621.390065	1240.76558	0.9213	0.00057249	3.1806	0.0019764	4.1019	0.0025489	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.75921	1	11216	11216		19.997	2.5288	1	22352000	+		10975	28528	7738	7746	12508	12508					0.15482521490503132
GIALVMYGR	9	Oxidation (M)	_GIALVM(Oxidation (M))YGR_		GIALVM(1)YGR		GIALVM(45)YGR	0	0	1		nc|ENSG00000173692|Q99460-2|PSMD1;ENSG00000173692|ENST00000308696|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.74578857421875	2	498.27077	994.526987	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.377	1	83.377	82.877	83.877	0								0	0	0	0.32382	1	7817	7817		44.531	12.576	1				10976	6880	7739	7747	12509	12509		118			0.029504179167361144
GIAQRLEH	8	Unmodified	_GIAQRLEH_					0	0	0			REV__ENST00000479199.1_1_2:163200728-163213435:+|nuORF	REV__ENST00000479199.1_1_2:163200728-163213435:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	462.2554016113281	2	462.256508	922.498464	-0.41541	-0.00019202	-1.2789	-0.00059118	-1.6943	-0.0007832	462.25572507259955	50.691	0.91424	50.599	50.35	51.265	-0.091797					43	26	2	0	0	0	0.87922	1	4020	4020		31.955	0.37597	1	292570	+		10977	18103	7740	7748	12510	12510					0.03411436331793993
GIDGVPLCH	9	Carbamidomethyl (C)	_GIDGVPLC(Carbamidomethyl (C))H_	GIDGVPLC(1)H		GIDGVPLC(50)H		0	1	0		chr9:15044050-15047899|20|20.5|0.0|20.97|-|1|None,CLCN3P1|1	chr9:15044050-15047899|20|20.5|0.0|20.97|-|1|None,CLCN3P1|1	chr9:15044050-15047899|20|20.5|0.0|20.97|-|1|None,CLCN3P1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.2358093261719	2	484.236927	966.459301	-1.6458	-0.00079696	0.11035	5.3435E-05	-1.5355	-0.00074352	484.2369070746642	87.276	1.0738	87.441	87.216	88.289	0.16473					45	24	2	0	0	0	0.5393	1	8586	8586		50.025	7.5501	1	1275000			10978	528	7741	7749	12511	12511	4				-0.025270320140862168
GIENSTVTL	9	Unmodified	_GIENSTVTL_					0	0	0		ENSG00000091972|ENST00000315711|CD200;nc|ENSG00000091972|P41217|CD200;nc|ENSG00000091972|P41217-3|CD200	ENSG00000091972|ENST00000315711|CD200	ENSG00000091972|ENST00000315711|CD200	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.248046875	2	467.248015	932.481476	-0.20878	-9.7553E-05	0.37075	0.00017323	0.16197	7.5679E-05	467.24791035184415	64.069	0.72615	64.623	64.256	64.982	0.55444					41	16	3	0	0	0	0.38563	1	6935	6935		58.782	2.0609	1	336490			10979	1686	7742	7750	12512	12512					0.01253470935353107
GIERRFLKAPL	11	Unmodified	_GIERRFLKAPL_					0	0	0		ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A;ENST00000554391.1_1_14:35240651-35242881:-|nuORF	ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	433.93389892578125	3	433.934706	1298.78229	-1.3262	-0.0005755	-0.10685	-4.6366E-05	-1.4331	-0.00062186	433.9344667101851	78.109	1.3072	78.109	77.757	79.064	0					126	48	4	0	0	0	0.67041	3	7144	7136;7144;7151		36.318	15.48	1	440910			10980	8294	7743	7751	12513;12514;12515	12514					0.14485022376447887
GIERRFLKAPL	11	Unmodified	_GIERRFLKAPL_					0	0	0		ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A;ENST00000554391.1_1_14:35240651-35242881:-|nuORF	ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.93408203125	3	433.934706	1298.78229	-1.5899	-0.00068989	0.11609	5.0378E-05	-1.4738	-0.00063951	434.2690671496609	77.468	0.99325	77.593	77.261	78.254	0.12486					124	39	4	0	0	0	0.71207	1	7291	7291		29.551	7.7703	1	875280			10981	8294	7743	7751	12516	12516					0.14485022376447887
GIERRFLKAPL	11	Unmodified	_GIERRFLKAPL_					0	0	0		ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A;ENST00000554391.1_1_14:35240651-35242881:-|nuORF	ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	433.934706	1298.78229	-1.3318	-0.00057791	-0.11694	-5.0746E-05	-1.4487	-0.00062865	433.934694430959	77.746	0.064857	77.746	77.692	77.757	0	0.050616	0.0013141	NaN	29.551	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23943			10982	8294	7743	7751							0.14485022376447887
GIERRFLKAPL	11	Unmodified	_GIERRFLKAPL_					0	0	0		ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A;ENST00000554391.1_1_14:35240651-35242881:-|nuORF	ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	433.934706	1298.78229	-0.16879	-7.3244E-05	-1.3136	-0.00057003	-1.4824	-0.00064328	433.933959900644	77.755	1.0685	77.807	77.477	78.546	0.052704	0.11147	-0.00024371	NaN	29.551	96	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	671200			10983	8294	7743	7751							0.14485022376447887
GIERRFLKAPL	11	Unmodified	_GIERRFLKAPL_					0	0	0		ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A;ENST00000554391.1_1_14:35240651-35242881:-|nuORF	ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	433.934706	1298.78229	-0.073162	-3.1748E-05	-1.3022	-0.00056508	-1.3754	-0.00059683	433.9339155250128	77.808	1.4222	77.757	77.375	78.797	-0.050789	0.060924	-0.00022885	NaN	29.551	131	49	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	692050			10984	8294	7743	7751							0.14485022376447887
GIERRFLKAPL	11	Unmodified	_GIERRFLKAPL_					0	0	0		ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A;ENST00000554391.1_1_14:35240651-35242881:-|nuORF	ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	433.934706	1298.78229	1.5702	0.00068134	-2.894	-0.0012558	-1.3239	-0.00057448	433.93314695078465	77.715	1.3747	77.765	77.37	78.744	0.04969	0.068876	-0.0023011	NaN	29.551	131	49	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	624400			10985	8294	7743	7751							0.14485022376447887
GIERRFLKAPL	11	Unmodified	_GIERRFLKAPL_					0	0	0		ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A;ENST00000554391.1_1_14:35240651-35242881:-|nuORF	ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	433.934706	1298.78229	0.52539	0.00022798	-2.0112	-0.00087274	-1.4858	-0.00064476	433.93362145009826	77.479	1.3379	77.613	77.18	78.518	0.13478	-0.082486	-0.0011519	NaN	29.551	131	53	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	769240			10986	8294	7743	7751							0.14485022376447887
GIERRFLKAPL	11	Unmodified	_GIERRFLKAPL_					0	0	0		ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A;ENST00000554391.1_1_14:35240651-35242881:-|nuORF	ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	433.934706	1298.78229	-1.4583	-0.00063282	-0.02216	-9.6159E-06	-1.4805	-0.00064243	433.9344541262502	77.498	1.3644	77.589	77.295	78.659	0.091431	-0.10652	0.0014375	NaN	29.551	143	55	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	749690			10987	8294	7743	7751							0.14485022376447887
GIEVDAHFPL	10	Unmodified	_GIEVDAHFPL_					0	0	0			REV__nc|ENSG00000143552|Q5VU65-2|NUP210L	REV__nc|ENSG00000143552|Q5VU65-2|NUP210L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.2572021484375	2	549.284931	1096.55531	-0.45034	-0.00024737	-3.2669	-0.0017944	-3.7172	-0.0020418	549.2823722407273	76.38	0.25151	76.78	76.658	76.909	0.39969					6	5	2	0	0	0	0.37624	1	8676	8676		20.947	6.0821	1	35665	+		10988	19821	7744	7752	12517	12517					0.010894390976545765
GIFLKAKR	8	Unmodified	_GIFLKAKR_					0	0	0			REV__nc|ENSG00000167889|Q3V5L5-5|MGAT5B	REV__nc|ENSG00000167889|Q3V5L5-5|MGAT5B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.8059997558594	2	466.805637	931.596721	-1.9392	-0.00090521	3.4764	0.0016228	1.5372	0.00071757	466.8071062107657	31.294	1.1887	31.294	30.953	32.141	0					86	41	3	0	0	0	0.81724	1	1471	1471		14.664	0.88877	1	152630	+		10989	15667	7745	7753	12518	12518					0.12818664647647893
GIGDICTGH	9	Unmodified	_GIGDICTGH_					0	0	0			REV__ENSG00000115718|ENST00000234071|PROC	REV__ENSG00000115718|ENST00000234071|PROC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2655029296875	2	436.700177	871.385802	-0.377	-0.00016464	-3.7985	-0.0016588	-4.1755	-0.0018235	436.6987617144069	22.813	0.28568	22.754	22.68	22.966	-0.058668					11	8	2	0	0	0	0.20789	1	752	752		57.811	15.337	1	9383.1	+		10990	18146	7746	7754	12519	12519					-0.05503580456536383
GIGGIGLRA	9	Unmodified	_GIGGIGLRA_					0	0	0			REV__ENST00000433071.2_1_21:32931573-32932426:+|nuORF	REV__ENST00000433071.2_1_21:32931573-32932426:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	407.2868347167969	2	407.250695	812.486836	-1.8577	-0.00075653	-3.3422	-0.0013611	-5.1999	-0.0021177	407.2487513274401	64.38	0.078178	64.5	64.444	64.522	0.12004					4	2	2	0	0	0	0.20789	1	5662	5662		24.203	7.4978	1	20396	+		10991	26643	7747	7755	12520	12520					0.07309239308460747
GIGGSIPIV	9	Unmodified	_GIGGSIPIV_					0	0	0		nc|ENSG00000159164|Q7L0J3-2|SV2A;ENSG00000159164|ENST00000369146|SV2A	nc|ENSG00000159164|Q7L0J3-2|SV2A	nc|ENSG00000159164|Q7L0J3-2|SV2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.2661437988281	2	406.747453	811.480354	-0.092654	-3.7687E-05	3.8365	0.0015605	3.7438	0.0015228	406.74902529134783	36.591	1.613	36.572	35.876	37.489	-0.018673					71	35	3	0	0	0	0.20789	1	2299	2299		40.573	0	1	102320			10992	5512	7748	7756	12521	12521					0.06707301357096185
GIGGSIPIV	9	Unmodified	_GIGGSIPIV_					0	0	0		nc|ENSG00000159164|Q7L0J3-2|SV2A;ENSG00000159164|ENST00000369146|SV2A	nc|ENSG00000159164|Q7L0J3-2|SV2A	nc|ENSG00000159164|Q7L0J3-2|SV2A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.257080078125	2	406.747453	811.480354	0.24452	9.9457E-05	3.5755	0.0014543	3.82	0.0015538	406.7488932350477	46.311	1.2259	46.349	45.89	47.116	0.038185					61	33	2	0	0	0	0.20789	1	3408	3408		25.45	0	1	137090			10993	5512	7748	7756	12522	12522					0.06707301357096185
GIGGSIPIV	9	Unmodified	_GIGGSIPIV_					0	0	0		nc|ENSG00000159164|Q7L0J3-2|SV2A;ENSG00000159164|ENST00000369146|SV2A	nc|ENSG00000159164|Q7L0J3-2|SV2A	nc|ENSG00000159164|Q7L0J3-2|SV2A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2571105957031	2	406.747453	811.480354	-0.44958	-0.00018287	4.2772	0.0017398	3.8276	0.0015569	406.74919328927984	46.455	1.6824	46.376	45.568	47.251	-0.079002					70	48	2	0	0	0	0.20789	1	3418	3418		12.959	0	1	142270			10994	5512	7748	7756	12523	12523					0.06707301357096185
GIGGSIPIV	9	Unmodified	_GIGGSIPIV_					0	0	0		nc|ENSG00000159164|Q7L0J3-2|SV2A;ENSG00000159164|ENST00000369146|SV2A	nc|ENSG00000159164|Q7L0J3-2|SV2A	nc|ENSG00000159164|Q7L0J3-2|SV2A	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.747453	811.480354	-1.9321	-0.00078588	5.4657	0.0022232	3.5336	0.0014373	406.7497102468801	36.72	1.667	36.72	35.684	37.351	0	0.12314	0.0010192	NaN	40.573	65	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125570			10995	5512	7748	7756							0.06707301357096185
GIGGSIPIV	9	Unmodified	_GIGGSIPIV_					0	0	0		nc|ENSG00000159164|Q7L0J3-2|SV2A;ENSG00000159164|ENST00000369146|SV2A	nc|ENSG00000159164|Q7L0J3-2|SV2A	nc|ENSG00000159164|Q7L0J3-2|SV2A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.747453	811.480354	-1.9087	-0.00077634	5.2309	0.0021277	3.3223	0.0013513	406.749706050748	36.606	1.4188	36.63	35.986	37.405	0.023624	0.032269	0.00082822	NaN	40.573	49	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66305			10996	5512	7748	7756							0.06707301357096185
GIGGVRPMLL	10	Unmodified	_GIGGVRPMLL_					0	0	0			REV__ENSG00000255408|ENST00000522353|PCDHA3	REV__ENSG00000255408|ENST00000522353|PCDHA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7994689941406	2	506.802237	1011.58992	-0.86379	-0.00043777	-2.3857	-0.0012091	-3.2495	-0.0016469	506.8010240498416	43.849	2.352	43.815	42.486	44.838	-0.033474					86	55	2	0	0	0	0.8608	1	3386	3386		34.173	2.2177	1	326070	+		10997	23899	7749	7757	12524	12524					0.08458983704770162
GIGGVRPMLL	10	Unmodified	_GIGGVRPMLL_					0	0	0			REV__ENSG00000255408|ENST00000522353|PCDHA3	REV__ENSG00000255408|ENST00000522353|PCDHA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8002624511719	2	506.802237	1011.58992	-0.566	-0.00028685	-1.6184	-0.00082023	-2.1844	-0.0011071	506.80135816429055	49.177	1.8282	49.153	47.938	49.766	-0.024033					72	41	2	0	0	0	0.84112	1	4138	4138		37.159	0	1	127540	+		10998	23899	7749	7757	12525	12525					0.08458983704770162
GIGGVRPMLL	10	Unmodified	_GIGGVRPMLL_					0	0	0			REV__ENSG00000255408|ENST00000522353|PCDHA3	REV__ENSG00000255408|ENST00000522353|PCDHA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.80047607421875	2	506.802237	1011.58992	-0.82989	-0.00042059	-1.3265	-0.00067229	-2.1564	-0.0010929	506.80152875358044	53.728	1.1104	53.75	53.327	54.438	0.022541					49	31	2	0	0	0	0.86452	1	4794	4794		30.504	5.0535	1	190510	+		10999	23899	7749	7757	12526	12526					0.08458983704770162
GIGGVRPMLL	10	Unmodified	_GIGGVRPMLL_					0	0	0			REV__ENSG00000255408|ENST00000522353|PCDHA3	REV__ENSG00000255408|ENST00000522353|PCDHA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.79974365234375	2	506.802237	1011.58992	-0.49674	-0.00025175	-1.7071	-0.00086514	-2.2038	-0.0011169	506.8013355229327	46.548	1.4801	46.564	46.121	47.601	0.015511					75	41	2	0	0	0	0.86589	1	3412	3412		29.15	1.2673	1	188180	+		11000	23899	7749	7757	12527	12527					0.08458983704770162
GIGGVRPMLL	10	Unmodified	_GIGGVRPMLL_					0	0	0			REV__ENSG00000255408|ENST00000522353|PCDHA3	REV__ENSG00000255408|ENST00000522353|PCDHA3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8011474609375	2	506.802237	1011.58992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.8	1	43.741	43.241	44.241	-0.058262								0	0	0	0.45132	1	3042	3042		24.203	1.1603	1		+		11001	23899	7749	7757	12528	12528					0.08458983704770162
GIGKNQPR	8	Unmodified	_GIGKNQPR_					0	0	0		nc|ENSG00000100697|Q9UPY3-2|DICER1;ENSG00000100697|ENST00000343455|DICER1;ENST00000532458.1_1_14:95582860-95590585:-|nuORF	nc|ENSG00000100697|Q9UPY3-2|DICER1	nc|ENSG00000100697|Q9UPY3-2|DICER1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2514953613281	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.884	1	7771	7771		33.516	3.0119	1	3292300			11002	14817	7750	7758	12529	12529					0.048394536773685104
GIGLPLPLA	9	Unmodified	_GIGLPLPLA_					0	0	0			REV__chr13:43059012-43065686|14|14.0|0.42|5.05|+|2|TE_info:L1PB1,L1PB1_dup10508,L1,LINE,donor,-,43056899,43059012|None,DNAJC15|16	REV__chr13:43059012-43065686|14|14.0|0.42|5.05|+|2|TE_info:L1PB1,L1PB1_dup10508,L1,LINE,donor,-,43056899,43059012|None,DNAJC15|16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.77490234375	2	425.773471	849.53239	0.17703	7.5374E-05	3.2935	0.0014023	3.4705	0.0014777	425.7747914132181	38.924	1.3455	39.012	38.418	39.764	0.088371					149	38	5	0	0	0	0.7932	1	2425	2425		21.702	2.3424	1	14185000	+		11003	15576	7751	7759	12530	12530					0.10160464770842736
GIGQEHFF	8	Unmodified	_GIGQEHFF_					0	0	0		ENSG00000105127|ENST00000269701|AKAP8;ENST00000598597.6_1_19:15465728-15479935:-|nuORF	ENSG00000105127|ENST00000269701|AKAP8	ENSG00000105127|ENST00000269701|AKAP8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7231750488281	2	467.72451	933.434466	-0.4994	-0.00023358	3.1829	0.0014887	2.6835	0.0012552	467.72561858861394	77.377	0.51485	77.945	77.704	78.219	0.56836					18	11	2	0	0	0	0.4196	1	8842	8842		29.15	10.825	1	133110			11004	2186	7752	7760	12531	12531					-0.03491343825146487
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.226806640625	2	420.227751	838.440949	-1.3512	-0.00056782	1.4844	0.0006238	0.13321	5.5978E-05	420.2282629742312	76.938	2.2039	76.938	74.958	77.162	0					134	85	2	0	0	0	0.84341	1	7017	7017		24.203	3.7209	1	154140			11005	12879	7753	7761	12532	12532					0.015265941262214255
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2278747558594	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.89962	1	7183	7183		38.806	12.01	1	419890			11006	12879	7753	7761	12533	12533					0.015265941262214255
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.22637939453125	2	420.227751	838.440949	-0.18786	-7.8944E-05	0.38594	0.00016218	0.19808	8.324E-05	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.88915	1	7350	7350		35.201	4.6971	1	279000			11007	12879	7753	7761	12534	12534					0.015265941262214255
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2276611328125	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.88915	3	7588	7571;7588;7826		47.916	3.7988	1	743780			11008	12879	7753	7761	12535;12536;12537	12536					0.015265941262214255
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2256774902344	2	420.227751	838.440949	2.3003	0.00096666	-2.0316	-0.00085375	0.26868	0.00011291	420.2267541958877	76.314	2.1809	76.362	74.634	76.815	0.047974					151	68	3	0	0	0	0.88915	1	7344	7344		35.201	10.998	1	250270			11009	12879	7753	7761	12538	12538					0.015265941262214255
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2275390625	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.884	2	7849	7849;7930		40.573	10.069	1	961790			11010	12879	7753	7761	12539;12540	12539					0.015265941262214255
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2275085449219	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.87922	2	7415	7322;7415		34.173	1.4512	1	831720			11011	12879	7753	7761	12541;12542	12542					0.015265941262214255
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22802734375	2	420.227751	838.440949	0.51188	0.00021511	-0.42574	-0.00017891	0.086147	3.6201E-05	420.22745728477395	76.673	2.5132	76.808	74.515	77.028	0.13478					135	81	3	0	0	0	0.87064	2	7201	7047;7201		31.955	1.4512	1	323390			11012	12879	7753	7761	12543;12544	12544					0.015265941262214255
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22747802734375	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.86288	3	7340	7316;7340;7447		42.474	8.9589	1	678130			11013	12879	7753	7761	12545;12546;12547	12546					0.015265941262214255
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2267150878906	2	420.227751	838.440949	-1.4714	-0.00061832	1.6677	0.00070082	0.19633	8.2505E-05	420.22834377301643	76.819	2.0914	76.909	74.945	77.036	0.089363					112	66	2	0	0	0	0.88915	2	7131	7079;7131		44.117	7.0883	1	246920			11014	12879	7753	7761	12548;12549	12549					0.015265941262214255
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2275390625	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.91005	2	7506	7348;7506		50.025	16.509	1	634680			11015	12879	7753	7761	12550;12551	12551					0.015265941262214255
GIGRSVHN	8	Unmodified	_GIGRSVHN_					0	0	0		ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	ENST00000503473.5_1_5:176737667-176737736:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.22784423828125	2	420.227751	838.440949	0.042435	1.7832E-05	0.092754	3.8978E-05	0.13519	5.681E-05	420.2277069932212	78.969	5.8282	79.518	76.332	82.16	0.54945					273	145	3	0	0	0	0.86288	4	9071	8941;8999;9071;9175		33.516	1.5607	1	581780			11016	12879	7753	7761	12552;12553;12554;12555	12554					0.015265941262214255
GIHTLIAALF	10	Unmodified	_GIHTLIAALF_					0	0	0			REV__nc|ENSG00000154188|Q15389-2|ANGPT1	REV__nc|ENSG00000154188|Q15389-2|ANGPT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.3137817382812	2	528.316035	1054.61752	-0.082821	-4.3756E-05	-3.5117	-0.0018553	-3.5946	-0.0018991	528.3142773088822	98.195	1.2332	98.423	97.779	99.012	0.22787					59	27	3	0	0	0	0.85939	1	10195	10195		23.042	0	1	437980	+		11017	29942	7754	7762	12556	12556					0.09239210236637518
GIHTVSPPT	9	Unmodified	_GIHTVSPPT_					0	0	0		ENST00000509389.5_1_1:24130838-24151905:-|nuORF	ENST00000509389.5_1_1:24130838-24151905:-|nuORF	ENST00000509389.5_1_1:24130838-24151905:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.7455749511719	2	454.745442	907.476331	1.0531	0.00047889	-2.1634	-0.00098381	-1.1103	-0.00050492	454.74431898752607	103.74	1.4301	103.79	103.32	104.75	0.041489					80	34	3	0	0	0	0.76996	1	11337	11337		33.516	5.6333	1	827910			11018	12990	7755	7763	12557	12557					0.01889211863363016
GIIDIVGLI	9	Unmodified	_GIIDIVGLI_					0	0	0			REV__ENSG00000152779|ENST00000371790|SLC16A12	REV__ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7932434082031	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.76402	2	1949	1949;2073		35.201	1.6851	1	3484100	+		11019	20316	7756	7764	12558;12559	12558					0.10984716596760791
GIIDIVGLI	9	Unmodified	_GIIDIVGLI_					0	0	0			REV__ENSG00000152779|ENST00000371790|SLC16A12	REV__ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.792724609375	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.7932	1	2845	2845		20.482	2.1574	1	548640	+		11020	20316	7756	7764	12560	12560					0.10984716596760791
GIIDIVGLI	9	Unmodified	_GIIDIVGLI_					0	0	0			REV__ENSG00000152779|ENST00000371790|SLC16A12	REV__ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7932434082031	2	456.791861	911.569169	0.17991	8.2183E-05	2.7362	0.0012499	2.9161	0.001332	456.7930101461281	36.153	2.2506	36.256	35.136	37.386	0.10306					210	68	4	0	0	0	0.67235	2	1949	1929;1949		42.474	7.2737	1	3531000	+		11021	20316	7756	7764	12561;12562	12562					0.10984716596760791
GIIDIVGLI	9	Unmodified	_GIIDIVGLI_					0	0	0			REV__ENSG00000152779|ENST00000371790|SLC16A12	REV__ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7932434082031	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.78851	1	1942	1942		28.254	7.7724	1	3452400	+		11022	20316	7756	7764	12563	12563					0.10984716596760791
GIIDIVGLI	9	Unmodified	_GIIDIVGLI_					0	0	0			REV__ENSG00000152779|ENST00000371790|SLC16A12	REV__ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7915344238281	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.69914	1	2838	2838		40.573	8.6178	1	605230	+		11023	20316	7756	7764	12564	12564					0.10984716596760791
GIIFNRLV	8	Unmodified	_GIIFNRLV_					0	0	0			REV__ENSG00000158023|ENST00000288912|CFAP251	REV__ENSG00000158023|ENST00000288912|CFAP251	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2908935546875	2	466.28982	930.565087	-0.42617	-0.00019872	0.52169	0.00024326	0.095514	4.4537E-05	466.2898922448067	74.098	1.2536	74.054	73.807	75.061	-0.043877					90	43	4	0	0	0	0.88915	1	7326	7326		35.201	0	1	967050	+		11024	20581	7757	7765	12565	12565					0.09702671893717252
GIIGKLSEEK	10	Unmodified	_GIIGKLSEEK_					0	0	0			REV__ENSG00000150627|ENST00000508596|WDR17	REV__ENSG00000150627|ENST00000508596|WDR17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.313720703125	2	537.313689	1072.61282	-0.24714	-0.00013279	-0.20337	-0.00010927	-0.45051	-0.00024207	537.3133643064616	49.552	0.65517	50.012	49.623	50.278	0.45983					30	15	3	0	0	0	0.47091	1	4845	4845		58.23	3.5076	1	930150	+		11025	20215	7758	7766	12566	12566					0.07942281303235177
GIIIIILNDL	10	Unmodified	_GIIIIILNDL_					0	0	0			REV__ENSG00000233232|ENST00000452313|NPIPB7	REV__ENSG00000233232|ENST00000452313|NPIPB7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.8504028320312	2	548.85245	1095.69035	-1.7957	-0.00098556	3.1714	0.0017407	1.3758	0.00075509	548.854107756805	41.735	1.0082	42.369	42.06	43.068	0.6339					60	25	4	0	0	0	0.86718	1	3706	3706		27.882	1.1893	1	1623000	+		11026	23130	7759	7767	12567	12567					0.14632919239420517
GIIIKTTK	8	Unmodified	_GIIIKTTK_					0	0	0			REV__ENSG00000148948|ENST00000528697|LRRC4C	REV__ENSG00000148948|ENST00000528697|LRRC4C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26556396484375	2	437.292028	872.569503	0.27941	0.00012218	-1.4168	-0.00061956	-1.1374	-0.00049738	437.29117388735483	24.201	0.39577	23.82	23.576	23.972	-0.38178					9	8	2	0	0	0	0.4196	1	1150	1150		11.511	0	1	18377	+		11027	20144	7760	7768	12568	12568					0.12812136316608758
GIIIVLTPLI	10	Unmodified	_GIIIVLTPLI_					0	0	0		ENSG00000204704|ENST00000377175|OR2W1	ENSG00000204704|ENST00000377175|OR2W1	ENSG00000204704|ENST00000377175|OR2W1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3613891601562	2	526.359911	1050.70527	0.22046	0.00011604	2.2181	0.0011675	2.4386	0.0012836	526.3609252843382	33.187	1.6469	33.296	32.993	34.64	0.10991					241	72	5	0	0	0	0.8488	1	1573	1573		17.365	5.1581	1	5657400			11028	8482	7761	7769	12569	12569					0.1819441110740172
GIILIFLRVKF	11	Unmodified	_GIILIFLRVKF_					0	0	0		ENST00000467496.5_1_X:129474252-129484631:+|nuORF;nc|ENSG00000102078|O95258-2|SLC25A14;ENSG00000102078|ENST00000545805|SLC25A14;nc|ENSG00000102078|O95258-3|SLC25A14	ENST00000467496.5_1_X:129474252-129484631:+|nuORF	ENST00000467496.5_1_X:129474252-129484631:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.6266784667969	3	440.291831	1317.85366	-0.14762	-6.4996E-05	1.4032	0.0006178	1.2555	0.0005528	440.29224154688933	58.12	1.3783	58.106	57.522	58.9	-0.013641					131	47	4	0	0	0	0.80361	1	5266	5266		10.587	0.4829	1	235220			11029	1988	7762	7770	12570	12570					0.20745142081091217
GIILLKRG	8	Unmodified	_GIILLKRG_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3002014160156	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.82464	1	7131	7131		21.702	0	1	1702600	+		11030	16685	7763	7771	12571	12571					0.14627262273370434
GIILLKRG	8	Unmodified	_GIILLKRG_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3003234863281	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.81548	1	6903	6903		20.482	0	1	1852500	+		11031	16685	7763	7771	12572	12572					0.14627262273370434
GIILPLKE	8	Unmodified	_GIILPLKE_					0	0	0			REV__ENSG00000133216|ENST00000374630|EPHB2	REV__ENSG00000133216|ENST00000374630|EPHB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7875671386719	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.90024	1	3053	3053		39.021	1.993	1	12523000	+		11032	19065	7764	7772	12573	12573					0.11308733942325944
GIILSVIPG	9	Unmodified	_GIILSVIPG_					0	0	0		ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77984619140625	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.7932	1	3413	3413		25.45	4.9683	1	1294000			11033	9190	7765	7773	12574	12574					0.10388447425282266
GIILSVIPG	9	Unmodified	_GIILSVIPG_					0	0	0		ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77813720703125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.868	1	54.86	54.36	55.36	-0.0077095								0	0	0	0.31088	1	4858	4858		26.796	2.5934	1				11034	9190	7765	7773	12575	12575					0.10388447425282266
GIILSVIPG	9	Unmodified	_GIILSVIPG_					0	0	0		ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801513671875	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.77546	1	2139	2139		31.955	6.5047	1	3951300			11035	9190	7765	7773	12576	12576					0.10388447425282266
GIILSVIPG	9	Unmodified	_GIILSVIPG_					0	0	0		ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.17139	7.4517E-05	3.201	0.0013917	3.3724	0.0014663	434.7800235008866	37.854	1.477	37.948	37.639	39.116	0.094318					162	48	4	0	0	0	0.76996	1	2326	2326		33.516	6.7195	1	2203700			11036	9190	7765	7773	12577	12577					0.10388447425282266
GIILSVIPG	9	Unmodified	_GIILSVIPG_					0	0	0		ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77978515625	2	434.778754	867.542954	0.12026	5.2288E-05	3.2796	0.0014259	3.3998	0.0014782	434.78004408406343	33.259	0.88562	33.227	32.891	33.776	-0.032677					85	40	3	0	0	0	0.7932	1	1610	1610		25.45	6.0902	1	316820			11037	9190	7765	7773	12578	12578					0.10388447425282266
GIILSVIPG	9	Unmodified	_GIILSVIPG_					0	0	0		ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	ENST00000225688.3_1_17:17398000-17398240:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7797546386719	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.67235	2	3729	3729;3789		42.474	8.9589	1	6824500			11038	9190	7765	7773	12579;12580	12579					0.10388447425282266
GIILTLIPS	9	Unmodified	_GIILTLIPS_					0	0	0		nc|ENSG00000112337|O00624-2|SLC17A2;nc|ENSG00000112337|O00624|SLC17A2;ENSG00000112337|ENST00000377850|SLC17A2	nc|ENSG00000112337|O00624-2|SLC17A2	nc|ENSG00000112337|O00624-2|SLC17A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7997741699219	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.7932	1	3687	3687		24.203	4.8428	1	5050800			11039	2658	7766	7774	12581	12581					0.11905003113804469
GIIMAMAS	8	2 Oxidation (M)	_GIIM(Oxidation (M))AM(Oxidation (M))AS_		GIIM(1)AM(1)AS		GIIM(42)AM(42)AS	0	0	2			REV__ENSG00000115760|ENST00000421745|BIRC6	REV__ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.1940002441406	2	413.195882	824.377211	-1.3059	-0.00053958	-4.0886	-0.0016894	-5.3945	-0.002229	413.19403059717405	79.058	2.8336	79.058	78.535	81.369	0					172	103	2	0	0	0	0.91005	1	7266	7266		42.474	7.2737	1	296430	+		11040	18149	7767	7775	12582	12582		262;263			-0.0420027041737967
GIIPAITRW	9	Unmodified	_GIIPAITRW_					0	0	0			REV__ENSG00000096401|ENST00000371477|CDC5L	REV__ENSG00000096401|ENST00000371477|CDC5L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8086547851562	2	513.808377	1025.6022	-1.4174	-0.00072826	2.551	0.0013107	1.1336	0.00058246	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.7932	1	3906	3906		26.693	1.2427	1	1977600	+		11041	17075	7768	7776	12583	12583					0.0904234343945518
GIIPAITRW	9	Unmodified	_GIIPAITRW_					0	0	0			REV__ENSG00000096401|ENST00000371477|CDC5L	REV__ENSG00000096401|ENST00000371477|CDC5L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.3106079101562	2	513.808377	1025.6022	0.034734	1.7846E-05	1.2224	0.00062807	1.2571	0.00064592	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.7932	1	4421	4421		25.45	6.0902	1	666950	+		11042	17075	7768	7776	12584	12584					0.0904234343945518
GIIRGKLL	8	Unmodified	_GIIRGKLL_					0	0	0			REV__ENST00000484575.1_1_2:209101805-209104899:-|nuORF	REV__ENST00000484575.1_1_2:209101805-209104899:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.30029296875	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.81724	1	6605	6605		14.664	0	1	1852500	+		11043	27514	7769	7777	12585	12585					0.14627262273381803
GIITKKNILEH	11	Unmodified	_GIITKKNILEH_					0	0	0		nc|ENSG00000109572|P51790-2|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5922546386719	3	422.590717	1264.75032	2.1003	0.00088759	2.5397	0.0010733	4.6401	0.0019609	422.59169327867005	49.208	2.7795	49.208	47.99	50.769	0.00016785					227	65	5	0	0	0	0.73277	1	4119	4119		25.892	0	1	2361900			11044	14840	7770	7778	12586	12586					0.12853609902663266
GIITKKNILEH	11	Unmodified	_GIITKKNILEH_					0	0	0		nc|ENSG00000109572|P51790-2|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59259033203125	3	422.590717	1264.75032	0.27263	0.00011521	4.3666	0.0018453	4.6392	0.0019605	422.5924825344156	49.575	1.8502	49.617	48.754	50.604	0.04224					166	47	4	0	0	0	0.68431	3	3820	3764;3808;3820		34.087	9.0187	1	2165700			11045	14840	7770	7778	12587;12588;12589	12589					0.12853609902663266
GIITPATIPS	10	Unmodified	_GIITPATIPS_					0	0	0		ENST00000586749.1_1_19:649375-650400:-|nuORF;ENSG00000070423|ENST00000292363|RNF126	ENST00000586749.1_1_19:649375-650400:-|nuORF	ENST00000586749.1_1_19:649375-650400:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.28546142578125	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.182	1	42.186	41.686	42.686	0.0043983								0	0	0	0.45132	1	2816	2816		42.396	5.237	1				11046	1241	7771	7779	12590	12590					0.06871224728774905
GIITPATIPS	10	Unmodified	_GIITPATIPS_					0	0	0		ENST00000586749.1_1_19:649375-650400:-|nuORF;ENSG00000070423|ENST00000292363|RNF126	ENST00000586749.1_1_19:649375-650400:-|nuORF	ENST00000586749.1_1_19:649375-650400:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.28515625	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.131	1	48.6	48.1	49.1	0.46941								0	0	0	0.45132	1	4623	4623		42.396	0	1				11047	1241	7771	7779	12591	12591					0.06871224728774905
GIIVHSITK	9	Unmodified	_GIIVHSITK_					0	0	0			REV__nc|ENSG00000175792|Q9Y265-2|RUVBL1	REV__nc|ENSG00000175792|Q9Y265-2|RUVBL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.3000793457031	2	484.300384	966.586216	0.031781	1.5392E-05	0.2052	9.938E-05	0.23698	0.00011477	484.3002883441307	32.311	0.43161	32.438	32.246	32.677	0.12643					17	9	2	0	0	0	0.78124	1	2279	2279		30.318	2.4355	1	290950	+		11048	22084	7772	7780	12592	12592					0.10158637202573573
GIIVKHFPKL	10	Unmodified	_GIIVKHFPKL_					0	0	0		nc|ENSG00000159363|Q9NQ11-3|ATP13A2;ENSG00000159363|ENST00000326735|ATP13A2;ENST00000466561.1_1_1:17313027-17318334:-|nuORF	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	576.3687744140625	2	576.368601	1150.72265	-0.70382	-0.00040566	1.5566	0.00089719	0.85281	0.00049153	576.3693112685854	39.803	1.7451	39.772	38.985	40.73	-0.03027					120	44	4	0	0	0	0.86718	1	2774	2774		27.882	10.517	1	583880			11049	5527	7773	7781	12593	12593					0.15331751433086538
GIIVLYET	8	Unmodified	_GIIVLYET_					0	0	0			REV__nc|ENSG00000205359|Q86UG4-2|SLCO6A1	REV__nc|ENSG00000205359|Q86UG4-2|SLCO6A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.23870849609375	2	454.260394	906.506234	0.11834	5.3756E-05	-4.4877	-0.0020386	-4.3694	-0.0019848	454.2582119851889	52.482	0.89083	52.5	51.818	52.709	0.017487					31	20	2	0	0	0	0.4196	1	4593	4593		13.775	0	1	66496	+		11050	23557	7774	7782	12594	12594					0.04924150808710692
GIKAISSAS	9	Unmodified	_GIKAISSAS_					0	0	0			REV__ENSG00000186439|ENST00000334268|TRDN	REV__ENSG00000186439|ENST00000334268|TRDN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2393493652344	2	417.239993	832.465432	1.1488	0.00047933	-3.1805	-0.001327	-2.0317	-0.00084772	417.2384906610176	88.485	2.0585	88.411	87.855	89.913	-0.074005					110	48	3	0	0	0	0.7932	1	9222	9222		25.574	1.3713	1	1559000	+		11051	22852	7775	7783	12595	12595					0.042498094890902394
GIKIMAFV	8	Unmodified	_GIKIMAFV_					0	0	0			REV__ENSG00000178732|ENST00000692618|GP5	REV__ENSG00000178732|ENST00000692618|GP5	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	439.7667541503906	2	439.762049	877.509546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.503	1	62.526	62.026	63.026	0.022984								0	0	0	0.30784	1	5453	5453		14.664	0	1		+		11052	22292	7776	7784	12596	12596					0.06589122381717516
GIKKKKVFTF	10	Unmodified	_GIKKKKVFTF_					0	0	0			REV__nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10	REV__nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	598.383056640625	2	598.381709	1194.74886	0.84734	0.00050703	-0.95155	-0.00056939	-0.10421	-6.236E-05	598.3810873389388	40.888	1.2283	40.892	40.311	41.539	0.0043983					77	44	2	0	0	0	0.86272	1	2593	2593		24.519	0	1	407900	+		11053	30238	7777	7785	12597	12597					0.15928020604565063
GIKLLSSSA	9	Unmodified	_GIKLLSSSA_					0	0	0			REV__nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	REV__nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2635803222656	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.7932	1	2728	2728		17.365	0	1	3673500	+		11054	16456	7778	7786	12598	12598					0.07010669040232642
GIKWNGILGL	10	Unmodified	_GIKWNGILGL_					0	0	0		nc|ENSG00000182240|Q9Y5Z0-3|BACE2;nc|ENSG00000182240|Q9Y5Z0-2|BACE2;ENSG00000182240|ENST00000330333|BACE2;ENST00000491838.5_1_21:42598231-42618026:+|nuORF;nc|ENSG00000182240|Q9Y5Z0-5|BACE2;nc|ENSG00000182240|Q9Y5Z0-4|BACE2	nc|ENSG00000182240|Q9Y5Z0-3|BACE2	nc|ENSG00000182240|Q9Y5Z0-3|BACE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	535.822509765625	2	535.821484	1069.62842	0.32707	0.00017525	1.4862	0.00079633	1.8133	0.00097158	535.8219708339973	50.942	1.3565	50.95	50.081	51.437	0.0077438					76	38	3	0	0	0	0.86589	1	4366	4366		29.15	0	1	218440			11055	7438	7779	7787	12599	12599					0.09638612610956443
GIKYKIAIVPD	11	Unmodified	_GIKYKIAIVPD_					0	0	0		ENSG00000152578|ENST00000282499|GRIA4	ENSG00000152578|ENST00000282499|GRIA4	ENSG00000152578|ENST00000282499|GRIA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5854187011719	3	406.24818	1215.72271	3.1409	0.001276	-0.55118	-0.00022392	2.5897	0.0010521	406.24731251758544	112.95	0.35545	112.98	112.85	113.21	0.030602					32	16	3	0	0	0	0.74771	1	13666	13666		22.562	2.9347	1	70867			11056	5184	7780	7788	12600	12600					0.12347706642412959
GILAAILAVC	10	Unmodified	_GILAAILAVC_					0	0	0		ENST00000270815.4_1_1:36180255-36180492:-|nuORF	ENST00000270815.4_1_1:36180255-36180492:-|nuORF	ENST00000270815.4_1_1:36180255-36180492:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2876892089844	2	472.285889	942.557224	1.4182	0.00066978	2.7208	0.001285	4.1389	0.0019548	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.85976	1	11455	11455		35.201	1.6851	1	21289000			11057	9557	7781	7789	12601	12601					0.08364776581902333
GILAKIVV	8	Unmodified	_GILAKIVV_					0	0	0		ENSG00000110435|ENST00000227868|PDHX;nc|ENSG00000110435|O00330-3|PDHX	ENSG00000110435|ENST00000227868|PDHX	ENSG00000110435|ENST00000227868|PDHX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7861022949219	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.81548	1	1321	1321		20.482	1.1219	1	1286900			11058	2530	7782	7790	12602	12602					0.13981055150509292
GILAKIVV	8	Unmodified	_GILAKIVV_					0	0	0		ENSG00000110435|ENST00000227868|PDHX;nc|ENSG00000110435|O00330-3|PDHX	ENSG00000110435|ENST00000227868|PDHX	ENSG00000110435|ENST00000227868|PDHX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7848205566406	2	406.783839	811.553125	-0.059143	-2.4059E-05	3.8477	0.0015652	3.7885	0.0015411	406.78528338513706	35.439	0.98428	35.378	35.066	36.05	-0.060333					48	30	2	0	0	0	0.80706	1	1836	1836		19.36	4.6959	1	346370			11059	2530	7782	7790	12603	12603					0.13981055150509292
GILALVLLPV	10	Unmodified	_GILALVLLPV_					0	0	0		ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	504.3478698730469	2	504.346803	1006.67905	0.18933	9.5487E-05	2.4145	0.0012177	2.6038	0.0013132	504.3478700295518	37.649	1.1061	37.591	37.002	38.108	-0.057915					88	34	3	0	0	0	0.85108	1	2170	2170		19.36	0	1	491130			11060	799	7783	7791	12604	12604					0.17598141935945932
GILALVLLPV	10	Unmodified	_GILALVLLPV_					0	0	0		ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	504.346803	1006.67905	-1.6501	-0.0008322	4.2819	0.0021596	2.6318	0.0013274	504.34876403179953	37.569	1.5091	37.569	36.867	38.376	0	-0.12318	0.00090908	NaN	19.36	85	35	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	322120			11061	799	7783	7791							0.17598141935945932
GILALVLLPV	10	Unmodified	_GILALVLLPV_					0	0	0		ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	504.346803	1006.67905	0.10761	5.4271E-05	2.4104	0.0012157	2.518	0.00127	504.3478598698089	37.913	1.8194	37.889	36.949	38.768	-0.024258	0.19654	-0.00097866	NaN	19.36	85	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272600			11062	799	7783	7791							0.17598141935945932
GILALVLLPV	10	Unmodified	_GILALVLLPV_					0	0	0		ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	504.346803	1006.67905	-2.2598	-0.0011397	4.8517	0.0024469	2.5918	0.0013072	504.3490861883476	37.694	1.4742	37.705	36.883	38.358	0.011173	0.012803	0.0014838	NaN	19.36	94	33	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	698580			11063	799	7783	7791							0.17598141935945932
GILALVLLPV	10	Unmodified	_GILALVLLPV_					0	0	0		ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	504.346803	1006.67905	-0.5483	-0.00027653	3.1626	0.0015951	2.6143	0.0013185	504.3482552327989	37.771	1.4288	37.787	37.101	38.53	0.016563	0.094881	-0.00021991	NaN	19.36	90	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	379420			11064	799	7783	7791							0.17598141935945932
GILALVLLPV	10	Unmodified	_GILALVLLPV_					0	0	0		ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	504.346803	1006.67905	0.23709	0.00011958	2.4896	0.0012556	2.7267	0.0013752	504.3478693112882	37.523	1.4792	37.623	36.737	38.216	0.099277	-0.0695	-0.00089881	NaN	19.36	101	45	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	424450			11065	799	7783	7791							0.17598141935945932
GILAPETVLL	10	Unmodified	_GILAPETVLL_					0	0	0		ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.819580078125	2	513.3157	1024.61685	-0.35462	-0.00018203	2.3175	0.0011896	1.9629	0.0010076	513.3169096731813	53.695	2.201	53.717	52.714	54.915	0.022537					86	65	3	0	0	0	0.85939	1	4748	4748		23.042	1.0826	1	230160			11066	8875	7784	7792	12605	12605					0.10552370796949617
GILCRRKSV	9	Unmodified	_GILCRRKSV_					0	0	0			REV__nc|ENSG00000101955|P78539-2|SRPX	REV__nc|ENSG00000101955|P78539-2|SRPX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3155517578125	2	516.310761	1030.60697	3.1012	0.0016012	3.1636	0.0016334	6.2648	0.0032346	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.76764	1	13192	13192		34.173	7.4796	1	1162600	+		11067	29746	7785	7793	12606	12606					0.0928890431059699
GILEIIEPV	9	Unmodified	_GILEIIEPV_					0	0	0			REV__nc|ENSG00000156113|Q12791-5|KCNMA1	REV__nc|ENSG00000156113|Q12791-5|KCNMA1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7984313964844	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.154	1	59.241	58.741	59.741	0.087002								0	0	0	0.2969	1	5053	5053		31.955	3.7006	1		+		11068	20470	7786	7794	12607	12607					0.08312395388577443
GILEVVSTL	9	Unmodified	_GILEVVSTL_					0	0	0			REV__nc|ENSG00000288520|G9CGD6-3|CNK3	REV__nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77728271484375	2	465.778951	929.543348	-1.5315	-0.00071332	-1.4276	-0.00066492	-2.959	-0.0013782	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.74721	1	7907	7907		37.159	5.2042	1	991370	+		11069	30287	7787	7795	12608	12608					0.07575822354476713
GILFLFKGRRF	11	Unmodified	_GILFLFKGRRF_					0	0	0		L1MB3_dup16926|chr22:15811040-15811839:+|2.7247471977861|0.3095763404933719|3.14|61.0|17|2|sense	L1MB3_dup16926|chr22:15811040-15811839:+|2.7247471977861|0.3095763404933719|3.14|61.0|17|2|sense	L1MB3_dup16926|chr22:15811040-15811839:+|2.7247471977861|0.3095763404933719|3.14|61.0|17|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.94366455078125	3	451.943313	1352.80811	-1.6541	-0.00074756	1.7865	0.00080741	0.13242	5.9847E-05	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.75906	1	4694	4694		20.03	2.1973	1	430100			11070	14580	7788	7796	12609	12609					0.14581916618749347
GILFLFKGRRF	11	Unmodified	_GILFLFKGRRF_					0	0	0		L1MB3_dup16926|chr22:15811040-15811839:+|2.7247471977861|0.3095763404933719|3.14|61.0|17|2|sense	L1MB3_dup16926|chr22:15811040-15811839:+|2.7247471977861|0.3095763404933719|3.14|61.0|17|2|sense	L1MB3_dup16926|chr22:15811040-15811839:+|2.7247471977861|0.3095763404933719|3.14|61.0|17|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.2823486328125	3	451.943313	1352.80811	0.028854	1.304E-05	-0.091411	-4.1313E-05	-0.062557	-2.8272E-05	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.75544	1	4908	4908		20.837	7.3292	1	513120			11071	14580	7788	7796	12610	12610					0.14581916618749347
GILGGPAAYQL	11	Unmodified	_GILGGPAAYQL_					0	0	0			REV__nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	REV__nc|ENSG00000180574|Q2VIR3-2|EIF2S3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2930908203125	2	530.295299	1058.57605	-1.5163	-0.00080409	-2.0724	-0.001099	-3.5887	-0.0019031	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.6921	1	8939	8939		32.812	2.4947	1	1686700	+		11072	30070	7789	7797	12611	12611					0.04910029477309763
GILGSILLP	9	Unmodified	_GILGSILLP_					0	0	0		ENST00000510738.2_1_12:19413894-19459437:+|nuORF;nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;chr12:19237034-19253940|23|17.17|0.17|6.62|+|ENST00000536974|PLEKHA5,PLEKHA5;nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;nc|ENSG00000052126|Q9HAU0|PLEKHA5;nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;ENSG00000052126|ENST00000429027|PLEKHA5	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7878723144531	2	441.786579	881.558604	-1.4973	-0.00066148	4.3629	0.0019275	2.8656	0.001266	441.788391738542	44.7	2.6432	44.712	43.395	46.038	0.012058					134	65	3	0	0	0	0.7932	1	3169	3169		26.796	1.3459	1	555340			11073	125	7790	7798	12612	12612					0.11308733942325944
GILGSILLP	9	Unmodified	_GILGSILLP_					0	0	0		ENST00000510738.2_1_12:19413894-19459437:+|nuORF;nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;chr12:19237034-19253940|23|17.17|0.17|6.62|+|ENST00000536974|PLEKHA5,PLEKHA5;nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;nc|ENSG00000052126|Q9HAU0|PLEKHA5;nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;ENSG00000052126|ENST00000429027|PLEKHA5	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78790283203125	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.7932	1	3160	3160		26.796	1.3459	1	403970			11074	125	7790	7798	12613	12613					0.11308733942325944
GILGVPLAET	10	Unmodified	_GILGVPLAET_					0	0	0			REV__nc|ENSG00000048392|Q7LG56-3|RRM2B	REV__nc|ENSG00000048392|Q7LG56-3|RRM2B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.2875671386719	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.658	1	74.703	74.203	75.203	0.04509								0	0	0	0.45132	1	7233	7233		30.504	5.0535	1		+		11075	16364	7791	7799	12614	12614					0.06871224728752168
GILGWRAE	8	Unmodified	_GILGWRAE_					0	0	0		ENST00000370986.8_1_1:68151170-68151713:+|nuORF;ENST00000370985.3_1_1:68151170-68152044:+|nuORF	ENST00000370986.8_1_1:68151170-68151713:+|nuORF	ENST00000370986.8_1_1:68151170-68151713:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.2488098144531	2	451.248152	900.481751	-1.2852	-0.00057995	3.0375	0.0013707	1.7523	0.0007907	451.2493154558184	65.489	1.09	65.618	64.991	66.081	0.12995					90	51	3	0	0	0	0.85277	1	5804	5804		25.45	0	1	1216500			11076	10653	7792	7800	12615	12615					0.02752935445857929
GILILKRNHLS	11	Unmodified	_GILILKRNHLS_					0	0	0		ENST00000434457.6_2_9:19360473-19369888:+|nuORF	ENST00000434457.6_2_9:19360473-19369888:+|nuORF	ENST00000434457.6_2_9:19360473-19369888:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	632.3977661132812	2	632.398422	1262.78229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.158	1	16.133	15.633	16.633	-0.024035								0	0	0	0.56276	1	117	117		16.717	1.8525	1				11077	11695	7793	7801	12616	12616					0.16141022376450564
GILKRPQTLAI	11	Unmodified	_GILKRPQTLAI_					0	0	0		ENSG00000162426|ENST00000471889|SLC45A1;ENST00000497660.5_1_1:8390216-8404070:+|nuORF	ENSG00000162426|ENST00000471889|SLC45A1	ENSG00000162426|ENST00000471889|SLC45A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9255676269531	3	403.92744	1208.76049	0.25224	0.00010189	2.3681	0.00095656	2.6204	0.0010584	403.92827500047315	43.269	1.3362	43.703	43.17	44.506	0.4334					104	32	4	0	0	0	0.80361	1	3968	3968		10.587	0	1	3935700			11078	5688	7794	7802	12617	12617					0.1644621762791303
GILLATGAFF	10	Unmodified	_GILLATGAFF_					0	0	0			REV__ENSG00000261949|ENST00000610896|GFY	REV__ENSG00000261949|ENST00000610896|GFY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	505.2913818359375	2	505.289485	1008.56442	-0.058143	-2.9379E-05	4.0641	0.0020536	4.006	0.0020242	505.291445253125	97.476	2.5316	97.533	97.032	99.564	0.056831					136	58	3	0	0	0	0.86452	1	10272	10272		30.504	4.9296	1	1323100	+		11079	15718	7795	7803	12618	12618					0.060478324539985806
GILLATGAFF	10	Unmodified	_GILLATGAFF_					0	0	0			REV__ENSG00000261949|ENST00000610896|GFY	REV__ENSG00000261949|ENST00000610896|GFY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	505.2913818359375	2	505.289485	1008.56442	0.77686	0.00039254	3.2589	0.0016467	4.0358	0.0020392	505.29100883966504	97.18	2.3666	97.343	96.835	99.202	0.16316					149	54	4	0	0	0	0.86589	1	10035	10035		29.15	7.1897	1	1148700	+		11080	15718	7795	7803	12619	12619					0.060478324539985806
GILLFAGGH	9	Unmodified	_GILLFAGGH_					0	0	0		nc|ENSG00000183087|Q14393-5|GAS6;nc|ENSG00000183087|Q14393-4|GAS6;ENST00000480426.5_1_13:114523839-114535869:-|nuORF;ENST00000610073.1_1_13:114523839-114538639:-|nuORF;nc|ENSG00000183087|Q14393-3|GAS6;ENSG00000183087|ENST00000327773|GAS6;nc|ENSG00000183087|Q14393-1|GAS6	nc|ENSG00000183087|Q14393-5|GAS6	nc|ENSG00000183087|Q14393-5|GAS6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2313537597656	2	442.75307	883.491587	-1.1568	-0.00051218	1.1749	0.0005202	0.018117	8.0213E-06	442.75329444415684	45.867	0.36464	46.338	46.132	46.496	0.4714					13	8	2	0	0	0	0.20789	1	4276	4276		29.842	0	1	264730			11081	7499	7796	7804	12620	12620					0.04518123451236988
GILLIPPQ	8	Unmodified	_GILLIPPQ_					0	0	0		ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7750549316406	2	425.773471	849.53239	0.52804	0.00022483	2.6288	0.0011193	3.1568	0.0013441	425.7745403369288	37.544	1.064	38.03	37.492	38.556	0.48581					97	26	5	0	0	0	0.81548	1	3106	3106		20.482	1.1219	1	42348000			11082	7762	7797	7805	12621	12621					0.10160464770854105
GILLIPPQ	8	Unmodified	_GILLIPPQ_					0	0	0		ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2576599121094	2	425.773471	849.53239	1.358	0.00057818	2.2694	0.00096627	3.6274	0.0015445	425.77436242561146	34.236	0.89346	34.541	34.241	35.135	0.30494					33	21	2	0	0	0	0.4196	1	2560	2560		26.796	6.3143	1	137220			11083	7762	7797	7805	12622	12622					0.10160464770854105
GILLLIERERN	11	Unmodified	_GILLLIERERN_					0	0	0		nc|ENSG00000158290|Q13620|CUL4B;ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620-3|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.600830078125	3	442.601504	1324.78268	2.7378	0.0012118	-3.66	-0.0016199	-0.9222	-0.00040817	442.5997945412009	103.8	1.4388	103.76	103.37	104.81	-0.043755					90	34	4	0	0	0	0.76579	1	11448	11448		18.531	0	1	569000			11084	5469	7798	7806	12623	12623					0.13328397305645012
GILLLKWTVRN	11	Unmodified	_GILLLKWTVRN_					0	0	0			REV__ENST00000503171.5_1_4:106317436-106374979:-|nuORF	REV__ENST00000503171.5_1_4:106317436-106374979:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.27276611328125	3	438.27484	1311.80269	-1.8129	-0.00079457	-2.4695	-0.0010823	-4.2824	-0.0018769	438.2736679941031	107.15	1.2018	107.19	106.63	107.83	0.036118					118	28	5	0	0	0	0.74405	1	11422	11422		23.378	3.3474	1	2816400	+		11085	27840	7799	7807	12624	12624					0.15926193036261793
GILLRLPQVAM	11	Unmodified	_GILLRLPQVAM_					0	0	0		ENSG00000221978|ENST00000400809|CCNL2;ENST00000466101.1_1_3:156877139-156877916:-|nuORF;nc|ENSG00000163660|Q9UK58-5|CCNL1;ENST00000471044.1_1_3:156876653-156877916:-|nuORF;nc|ENSG00000221978|Q96S94-5|CCNL2;nc|ENSG00000221978|Q96S94-2|CCNL2;nc|ENSG00000163660|Q9UK58-4|CCNL1;nc|ENSG00000221978|Q96S94-4|CCNL2;nc|ENSG00000163660|Q9UK58-6|CCNL1;ENSG00000163660|ENST00000295926|CCNL1	ENSG00000221978|ENST00000400809|CCNL2	ENSG00000221978|ENST00000400809|CCNL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	605.871826171875	2	605.870651	1209.72675	-0.19668	-0.00011917	2.5775	0.0015616	2.3808	0.0014424	605.8720562136382	100.58	1.534	100.58	100.08	101.62	0					94	35	4	0	0	0	0.68378	3	10219	10195;10219;10230		34.173	13.226	1	971210			11086	8690	7800	7808	12625;12626;12627	12626					0.13027472864473566
GILLRLPQVAM	11	Unmodified	_GILLRLPQVAM_					0	0	0		ENSG00000221978|ENST00000400809|CCNL2;ENST00000466101.1_1_3:156877139-156877916:-|nuORF;nc|ENSG00000163660|Q9UK58-5|CCNL1;ENST00000471044.1_1_3:156876653-156877916:-|nuORF;nc|ENSG00000221978|Q96S94-5|CCNL2;nc|ENSG00000221978|Q96S94-2|CCNL2;nc|ENSG00000163660|Q9UK58-4|CCNL1;nc|ENSG00000221978|Q96S94-4|CCNL2;nc|ENSG00000163660|Q9UK58-6|CCNL1;ENSG00000163660|ENST00000295926|CCNL1	ENSG00000221978|ENST00000400809|CCNL2	ENSG00000221978|ENST00000400809|CCNL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.8724365234375	2	605.870651	1209.72675	-0.46872	-0.00028398	2.8399	0.0017206	2.3711	0.0014366	605.8722201329331	100.48	2.0532	100.52	100	102.06	0.039742					113	47	4	0	0	0	0.72918	1	10713	10713		26.693	1.1189	1	1745000			11087	8690	7800	7808	12628	12628					0.13027472864473566
GILLRLPQVAM	11	Unmodified	_GILLRLPQVAM_					0	0	0		ENSG00000221978|ENST00000400809|CCNL2;ENST00000466101.1_1_3:156877139-156877916:-|nuORF;nc|ENSG00000163660|Q9UK58-5|CCNL1;ENST00000471044.1_1_3:156876653-156877916:-|nuORF;nc|ENSG00000221978|Q96S94-5|CCNL2;nc|ENSG00000221978|Q96S94-2|CCNL2;nc|ENSG00000163660|Q9UK58-4|CCNL1;nc|ENSG00000221978|Q96S94-4|CCNL2;nc|ENSG00000163660|Q9UK58-6|CCNL1;ENSG00000163660|ENST00000295926|CCNL1	ENSG00000221978|ENST00000400809|CCNL2	ENSG00000221978|ENST00000400809|CCNL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.87255859375	2	605.870651	1209.72675	2.969	0.0017988	-0.45947	-0.00027838	2.5096	0.0015205	605.8701685265158	100.36	1.5776	100.31	99.825	101.4	-0.052109					123	36	5	0	0	0	0.72918	2	10889	10889;10926		26.693	3.1702	1	1633200			11088	8690	7800	7808	12629;12630	12629					0.13027472864473566
GILLRLPQVAM	11	Unmodified	_GILLRLPQVAM_					0	0	0		ENSG00000221978|ENST00000400809|CCNL2;ENST00000466101.1_1_3:156877139-156877916:-|nuORF;nc|ENSG00000163660|Q9UK58-5|CCNL1;ENST00000471044.1_1_3:156876653-156877916:-|nuORF;nc|ENSG00000221978|Q96S94-5|CCNL2;nc|ENSG00000221978|Q96S94-2|CCNL2;nc|ENSG00000163660|Q9UK58-4|CCNL1;nc|ENSG00000221978|Q96S94-4|CCNL2;nc|ENSG00000163660|Q9UK58-6|CCNL1;ENSG00000163660|ENST00000295926|CCNL1	ENSG00000221978|ENST00000400809|CCNL2	ENSG00000221978|ENST00000400809|CCNL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.87255859375	2	605.870651	1209.72675	1.0692	0.00064779	1.3447	0.00081471	2.4139	0.0014625	605.8712819289403	100.09	1.5113	100.3	99.817	101.33	0.21512					93	35	4	0	0	0	0.72918	1	10445	10445		26.693	2.1737	1	798340			11089	8690	7800	7808	12631	12631					0.13027472864473566
GILLRLPQVAM	11	Unmodified	_GILLRLPQVAM_					0	0	0		ENSG00000221978|ENST00000400809|CCNL2;ENST00000466101.1_1_3:156877139-156877916:-|nuORF;nc|ENSG00000163660|Q9UK58-5|CCNL1;ENST00000471044.1_1_3:156876653-156877916:-|nuORF;nc|ENSG00000221978|Q96S94-5|CCNL2;nc|ENSG00000221978|Q96S94-2|CCNL2;nc|ENSG00000163660|Q9UK58-4|CCNL1;nc|ENSG00000221978|Q96S94-4|CCNL2;nc|ENSG00000163660|Q9UK58-6|CCNL1;ENSG00000163660|ENST00000295926|CCNL1	ENSG00000221978|ENST00000400809|CCNL2	ENSG00000221978|ENST00000400809|CCNL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.8727416992188	2	605.870651	1209.72675	0.90131	0.00054608	1.5322	0.00092832	2.4335	0.0014744	605.871436730015	100.15	1.5268	100.3	99.851	101.38	0.15073					77	35	3	0	0	0	0.72918	1	10478	10478		26.693	4.1133	1	806450			11090	8690	7800	7808	12632	12632					0.13027472864473566
GILLVGGVLA	10	Unmodified	_GILLVGGVLA_					0	0	0			REV__ENSG00000069696|ENST00000176183|DRD4	REV__ENSG00000069696|ENST00000176183|DRD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3011779785156	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.86786	1	2079	2079		26.796	0	1	1220600	+		11091	16585	7801	7809	12633	12633					0.1262842283366581
GILLVGGVLA	10	Unmodified	_GILLVGGVLA_					0	0	0			REV__ENSG00000069696|ENST00000176183|DRD4	REV__ENSG00000069696|ENST00000176183|DRD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30120849609375	2	456.299853	910.585153	-0.23118	-0.00010549	2.4791	0.0011312	2.2479	0.0010257	456.30086790597977	45.013	2.0189	44.944	43.946	45.965	-0.068634					97	50	2	0	0	0	0.85976	1	3266	3266		35.201	0	1	498520	+		11092	16585	7801	7809	12634	12634					0.1262842283366581
GILLVLLFFFN	11	Unmodified	_GILLVLLFFFN_					0	0	0			REV__ENSG00000170537|ENST00000304381|TMC7	REV__ENSG00000170537|ENST00000304381|TMC7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3928833007812	2	648.391742	1294.76893	-1.1411	-0.00073988	2.087	0.0013532	0.94594	0.00061334	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.72918	2	12423	12423;12504		26.693	2.8564	1	2297700	+		11093	21670	7802	7810	12635;12636	12635					0.13333771544512274
GILPGVRPGF	10	Unmodified	_GILPGVRPGF_					0	0	0		nc|ENSG00000137601|Q96PY6|NEK1;ENSG00000137601|ENST00000507142|NEK1;ENST00000509912.5_1_4:170476851-170520268:-|nuORF;nc|ENSG00000137601|Q96PY6-5|NEK1	nc|ENSG00000137601|Q96PY6|NEK1	nc|ENSG00000137601|Q96PY6|NEK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.79974365234375	2	506.800552	1011.58655	-0.74642	-0.00037829	1.5683	0.00079484	0.82192	0.00041655	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.86452	1	3635	3635		30.504	5.0535	1	258120			11094	4217	7803	7811	12637	12637					0.08122056922422871
GILPKAVN	8	Unmodified	_GILPKAVN_					0	0	0			REV__ENST00000510175.5_1_4:155055-155787:+|nuORF	REV__ENST00000510175.5_1_4:155055-155787:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5641174316406	2	406.255446	810.496338	0.3749	0.00015231	2.3106	0.00093869	2.6855	0.001091	406.25637648726445	61.101	0.60503	61.22	60.647	61.252	0.11901					44	25	3	0	0	0	0.4196	1	5256	5256		8.8223	4.8371	1	563200	+		11095	27947	7804	7812	12638	12638					0.08351007593989834
GILPMKQGT	9	Unmodified	_GILPMKQGT_					0	0	0			REV__ENSG00000117448|ENST00000351829|AKR1A1	REV__ENSG00000117448|ENST00000351829|AKR1A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.76751708984375	2	472.76532	943.516088	0.74188	0.00035074	3.3813	0.0015986	4.1232	0.0019493	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.7932	1	8726	8726		24.203	0	1	547170	+		11096	18262	7805	7813	12639	12639					0.042070155424539735
GILPVLVN	8	Unmodified	_GILPVLVN_					0	0	0			REV__ENST00000470258.5_1_13:39623408-39623585:+|nuORF	REV__ENST00000470258.5_1_13:39623408-39623585:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2677001953125	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.86791	1	2467	2467		28.254	5.2176	1	1649400	+		11097	27206	7806	7814	12640	12640					0.09792178253815109
GILPVLVN	8	Unmodified	_GILPVLVN_					0	0	0			REV__ENST00000470258.5_1_13:39623408-39623585:+|nuORF	REV__ENST00000470258.5_1_13:39623408-39623585:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2666931152344	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.90024	1	2647	2647		39.021	0	1	795210	+		11098	27206	7806	7814	12641	12641					0.09792178253815109
GILPVLVN	8	Unmodified	_GILPVLVN_					0	0	0			REV__ENST00000470258.5_1_13:39623408-39623585:+|nuORF	REV__ENST00000470258.5_1_13:39623408-39623585:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76666259765625	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.86791	1	2219	2219		28.254	0	1	1619400	+		11099	27206	7806	7814	12642	12642					0.09792178253815109
GILRIQRCHLR	11	Unmodified	_GILRIQRCHLR_					0	0	0			REV__nc|ENSG00000198788|Q02817|MUC2	REV__nc|ENSG00000198788|Q02817|MUC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6085510253906	3	455.606707	1363.79829	-0.55129	-0.00025117	4.362	0.0019873	3.8107	0.0017362	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.74022	1	7014	7014		24.232	2.4514	1	1732400	+		11100	30151	7807	7815	12643	12643					0.13094405341712445
GILRIQRCHLR	11	Unmodified	_GILRIQRCHLR_					0	0	0			REV__nc|ENSG00000198788|Q02817|MUC2	REV__nc|ENSG00000198788|Q02817|MUC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.60821533203125	3	455.606707	1363.79829	-0.02024	-9.2214E-06	3.7646	0.0017152	3.7444	0.001706	455.608304720296	65.806	3.5163	66.359	63.877	67.393	0.5526					173	94	4	0	0	0	0.69931	1	7121	7121		31.634	1.0654	1	1863500	+		11101	30151	7807	7815	12644	12644					0.13094405341712445
GILRIVKV	8	Unmodified	_GILRIVKV_					0	0	0			REV__nc|ENSG00000131778|Q86WJ1-5|CHD1L	REV__nc|ENSG00000131778|Q86WJ1-5|CHD1L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	449.31396484375	2	449.315838	896.617122	-2.1641	-0.00097236	-0.50993	-0.00022912	-2.674	-0.0012015	449.31543234649376	20.072	0.91752	20.072	19.547	20.465	0					75	43	2	0	0	0	0.81548	1	467	467		20.482	4.8456	1	130470	+		11102	18965	7808	7816	12645	12645					0.16467835307480527
GILSPTQP	8	Unmodified	_GILSPTQP_					0	0	0		ENST00000475688.1_1_3:50378843-50379883:-|nuORF	ENST00000475688.1_1_3:50378843-50379883:-|nuORF	ENST00000475688.1_1_3:50378843-50379883:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7290954589844	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.82658	1	7578	7578		21.96	1.9631	1	159770			11103	12329	7809	7817	12646	12646					0.03070424460383947
GILSVITNAFV	11	Unmodified	_GILSVITNAFV_					0	0	0		nc|ENSG00000151572|Q32M45-3|ANO4;nc|ENSG00000151572|Q32M45-2|ANO4;ENSG00000151572|ENST00000392977|ANO4	nc|ENSG00000151572|Q32M45-3|ANO4	nc|ENSG00000151572|Q32M45-3|ANO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3294677734375	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.64498	1	9912	9912		39.253	2.8061	1	15673000			11104	5126	7810	7818	12647	12647					0.08819158199935373
GILSVPAVAM	10	Unmodified	_GILSVPAVAM_					0	0	0		nc|ENSG00000188549|Q6ZUT6|CCDC9B	nc|ENSG00000188549|Q6ZUT6|CCDC9B	nc|ENSG00000188549|Q6ZUT6|CCDC9B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2775573730469	2	479.275521	956.536489	0.83201	0.00039876	3.0426	0.0014583	3.8747	0.001857	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.86452	1	8880	8880		30.504	3.8107	1	7289200			11105	15169	7811	7819	12648	12648					0.05648186202256511
GILSVPAVAM	10	Unmodified	_GILSVPAVAM_					0	0	0		nc|ENSG00000188549|Q6ZUT6|CCDC9B	nc|ENSG00000188549|Q6ZUT6|CCDC9B	nc|ENSG00000188549|Q6ZUT6|CCDC9B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2777404785156	2	479.275521	956.536489	0.63867	0.0003061	3.2635	0.0015641	3.9021	0.0018702	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.86452	1	8612	8612		30.504	0	1	6593200			11106	15169	7811	7819	12649	12649					0.05648186202256511
GILTFIWVLMF	11	Unmodified	_GILTFIWVLMF_					0	0	0		ENSG00000197296|ENST00000396825|FITM2	ENSG00000197296|ENST00000396825|FITM2	ENSG00000197296|ENST00000396825|FITM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2603454589844	3	447.254277	1338.741	0.50863	0.00022749	-0.35431	-0.00015846	0.15432	6.9022E-05	447.2543854232367	37.475	0.81999	37.96	37.577	38.397	0.4858					36	20	3	0	0	0	0.17294	1	2996	2996		31.634	3.9903	1	342990			11107	8150	7812	7820	12650	12650					0.08518125292744116
GILTLMWDKNN	11	Unmodified	_GILTLMWDKNN_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7802429199219	3	435.560429	1303.65946	0.68237	0.00029722	4.398	0.0019156	5.0804	0.0022128	436.2324262741359	34.587	0.42312	34.593	34.339	34.762	0.0063896					18	9	3	0	0	0	0.17243	1	2096	2096		35.178	14.146	1	21140			11108	8534	7813	7821	12651	12651					0.019773978628791156
GILTLPKP	8	Unmodified	_GILTLPKP_					0	0	0		nc|ENSG00000165929|Q8N9U0-2|TC2N;ENSG00000165929|ENST00000435962|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7749938964844	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.66521	1	3240	3240		68.787	17.451	1	10965000			11109	6139	7814	7822	12652	12652					0.10712464770847419
GILTLPKP	8	Unmodified	_GILTLPKP_					0	0	0		nc|ENSG00000165929|Q8N9U0-2|TC2N;ENSG00000165929|ENST00000435962|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77557373046875	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.87922	1	3548	3548		31.955	1.4512	1	11423000			11110	6139	7814	7822	12653	12653					0.10712464770847419
GILTLPKP	8	Unmodified	_GILTLPKP_					0	0	0		nc|ENSG00000165929|Q8N9U0-2|TC2N;ENSG00000165929|ENST00000435962|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.77496337890625	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.884	3	3254	3185;3254;3279		42.474	3.6689	1	10266000			11111	6139	7814	7822	12654;12655;12656	12655					0.10712464770847419
GILTLPKP	8	Unmodified	_GILTLPKP_					0	0	0		nc|ENSG00000165929|Q8N9U0-2|TC2N;ENSG00000165929|ENST00000435962|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7752380371094	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.884	1	2928	2928		33.516	3.0119	1	10440000			11112	6139	7814	7822	12657	12657					0.10712464770847419
GILTLPKP	8	Unmodified	_GILTLPKP_					0	0	0		nc|ENSG00000165929|Q8N9U0-2|TC2N;ENSG00000165929|ENST00000435962|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7752990722656	2	419.773471	837.53239	-1.7976	-0.00075458	3.9115	0.0016419	2.1139	0.00088736	419.77504327395843	41.402	2.6775	41.816	41.329	44.007	0.4139					184	68	5	0	0	0	0.90465	1	3706	3706		40.573	1.7665	1	169320000			11113	6139	7814	7822	12658	12658					0.10712464770847419
GILTLPKP	8	Unmodified	_GILTLPKP_					0	0	0		nc|ENSG00000165929|Q8N9U0-2|TC2N;ENSG00000165929|ENST00000435962|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7750244140625	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.88915	1	3655	3655		35.201	1.6851	1	184570000			11114	6139	7814	7822	12659	12659					0.10712464770847419
GILTLPKP	8	Unmodified	_GILTLPKP_					0	0	0		nc|ENSG00000165929|Q8N9U0-2|TC2N;ENSG00000165929|ENST00000435962|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	419.773471	837.53239	-1.8468	-0.00077522	4.9599	0.002082	3.1131	0.0013068	419.7754517704256	42.457	2.9809	42.457	41.56	44.541	0	-0.080624	0.0011653	NaN	68.787	232	72	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14147000			11115	6139	7814	7822							0.10712464770847419
GILTLPKP	8	Unmodified	_GILTLPKP_					0	0	0		nc|ENSG00000165929|Q8N9U0-2|TC2N;ENSG00000165929|ENST00000435962|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	nc|ENSG00000165929|Q8N9U0-2|TC2N	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	419.773471	837.53239	-1.8636	-0.0007823	5.1479	0.0021609	3.2843	0.0013786	419.7755190782941	42.602	2.9066	42.608	41.359	44.266	0.0057526	0.070152	0.0013232	NaN	68.787	222	76	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9883900			11116	6139	7814	7822							0.10712464770847419
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3610229492188	2	526.359911	1050.70527	-1.5923	-0.00083811	3.7176	0.0019568	2.1254	0.0011187	526.3617428180578	33.41	1.543	33.41	33.111	34.654	0					182	44	5	0	0	0	0.86201	2	1754	1707;1754		31.955	0	1	7280900			11117	6807	7815	7823	12660;12661	12661					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3611450195312	2	526.359911	1050.70527	-1.5676	-0.00082514	3.904	0.0020549	2.3364	0.0012298	526.3617973555264	35.031	1.6441	35.031	34.615	36.259	0					148	43	4	0	0	0	0.85939	3	1913	1913;1969;2000		30.504	3.6825	1	1307600			11118	6807	7815	7823	12662;12663;12664	12662					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3611450195312	2	526.359911	1050.70527	0.086645	4.5607E-05	2.1771	0.0011459	2.2637	0.0011915	526.3609236587663	33.368	2.0596	33.371	32.762	34.822	0.0030785					171	48	5	0	0	0	0.85939	3	1970	1949;1970;2013		30.504	12.676	1	3096800			11119	6807	7815	7823	12665;12666;12667	12666					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3590087890625	2	526.359911	1050.70527	-0.016718	-8.7995E-06	2.2479	0.0011832	2.2312	0.0011744	526.3609420824897	35.324	1.4285	35.312	34.729	36.157	-0.012199					134	33	5	0	0	0	0.85939	2	2267	2241;2267		29.15	6.1071	1	5338900			11120	6807	7815	7823	12668;12669	12669					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3607788085938	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.85694	2	2458	2412;2458		29.15	4.9468	1	781950			11121	6807	7815	7823	12670;12671	12671					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3610229492188	2	526.359911	1050.70527	0.054232	2.8545E-05	1.9819	0.0010432	2.0362	0.0010718	526.3608595612541	33.548	1.6551	33.491	33.113	34.768	-0.056385					153	37	5	0	0	0	0.86201	3	2099	2041;2099;2181		30.504	7.4612	1	7840300			11122	6807	7815	7823	12672;12673;12674	12673					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3595581054688	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.86589	1	2362	2362		29.15	0	1	2871800			11123	6807	7815	7823	12675	12675					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3610229492188	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.86201	3	1981	1969;1981;2003		31.955	0	1	5020100			11124	6807	7815	7823	12676;12677;12678	12677					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3607788085938	2	526.359911	1050.70527	-0.47346	-0.00024921	2.7476	0.0014462	2.2741	0.001197	526.3612126681783	35.14	1.5704	35.146	34.727	36.297	0.0063934					147	36	5	0	0	0	0.86201	2	2256	2158;2256		29.15	6.8378	1	2682400			11125	6807	7815	7823	12679;12680	12680					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3612060546875	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.71042	2	2437	2389;2437		44.117	6.9577	1	2706400			11126	6807	7815	7823	12681;12682	12682					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3607177734375	2	526.359911	1050.70527	-0.23001	-0.00012107	2.5809	0.0013585	2.3509	0.0012374	526.3611422284945	33.372	1.4852	33.418	33.076	34.561	0.045849					221	65	5	0	0	0	0.81018	2	1585	1585;1623		38.806	7.7521	1	5657100			11127	6807	7815	7823	12683;12684	12683					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3612670898438	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.86201	1	1812	1812		24.203	5.8783	1	1497200			11128	6807	7815	7823	12685	12685					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.360595703125	2	526.359911	1050.70527	-0.2233	-0.00011753	2.7139	0.0014285	2.4906	0.0013109	526.3612023516472	37.188	2.125	37.212	36.022	38.147	0.023624					163	60	4	0	0	0	0.8488	1	2154	2154		17.365	0.89182	1	1504200			11129	6807	7815	7823	12686	12686					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3619384765625	2	526.359911	1050.70527	0.22046	0.00011604	2.2181	0.0011675	2.4386	0.0012836	526.3609252843382	33.187	1.6469	33.296	32.993	34.64	0.10991					241	72	5	0	0	0	0.85438	2	1680	1653;1680		30.504	7.4612	1	5657400			11130	6807	7815	7823	12687;12688	12688					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3617553710938	2	526.359911	1050.70527	0.23622	0.00012434	2.2547	0.0011868	2.4909	0.0013111	526.3609415708197	35.175	1.5308	35.281	34.617	36.148	0.10604					147	55	3	0	0	0	0.8488	1	1844	1844		17.365	0	1	1065400			11131	6807	7815	7823	12689	12689					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3609008789062	2	526.359911	1050.70527	0.25296	0.00013315	2.2538	0.0011863	2.5068	0.0013195	526.3609378895691	36.94	1.9118	37.039	36.051	37.962	0.099277					159	60	4	0	0	0	0.85939	3	2122	2067;2113;2122		30.504	6.8378	1	1522000			11132	6807	7815	7823	12690;12691;12692	12692					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3612060546875	2	526.359911	1050.70527	0.41493	0.0002184	1.9977	0.0010515	2.4127	0.0012699	526.3608149931753	33.292	1.7707	33.259	32.845	34.615	-0.032677					246	76	5	0	0	0	0.86589	1	1629	1629		29.15	4.9468	1	5110100			11133	6807	7815	7823	12693	12693					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3609008789062	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.81018	2	1848	1816;1848		38.806	14.603	1	1221500			11134	6807	7815	7823	12694;12695	12695					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3607177734375	2	526.359911	1050.70527	0.28216	0.00014852	2.2187	0.0011678	2.5009	0.0013164	526.3609172298998	37.04	1.8045	36.98	36.127	37.931	-0.060337					149	55	4	0	0	0	0.85939	2	2122	2078;2122		29.15	5.6775	1	1903200			11135	6807	7815	7823	12696;12697	12697					0.18194411107424457
GILTPLVILL	10	Unmodified	_GILTPLVILL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3611450195312	2	526.359911	1050.70527	1.0713	0.00056389	1.2303	0.0006476	2.3016	0.0012115	526.360423923534	32.788	1.6436	32.999	32.422	34.066	0.21168					152	38	5	0	0	0	0.81018	4	2347	2287;2347;2372;2434		38.806	6.8513	1	7743700			11136	6807	7815	7823	12698;12699;12700;12701	12699					0.18194411107424457
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77886962890625	2	434.778754	867.542954	0.13644	5.932E-05	2.2845	0.00099327	2.421	0.0010526	434.77963633612353	39.861	1.5425	39.83	39.322	40.865	-0.03027					156	40	5	0	0	0	0.7932	1	2864	2864		25.45	2.4077	1	4621500			11137	13707	7816	7824	12702	12702					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7798767089844	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.69914	1	3790	3790		40.573	5.3719	1	2017500			11138	13707	7816	7824	12703	12703					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78033447265625	2	434.778754	867.542954	-0.097946	-4.2585E-05	2.9953	0.0013023	2.8973	0.0012597	434.7799034741548	53.402	2.1549	53.397	52.578	54.733	-0.0053673					128	65	3	0	0	0	0.78058	1	4740	4740		30.504	2.6214	1	357680			11139	13707	7816	7824	12704	12704					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7794189453125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.771	1	57.757	57.257	58.257	-0.013641								0	0	0	0.2969	1	5235	5235		31.955	1.4512	1				11140	13707	7816	7824	12705	12705					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78033447265625	2	434.778754	867.542954	-1.3516	-0.00058764	3.9223	0.0017053	2.5707	0.0011177	434.78034506978366	39.667	1.8641	39.623	39.121	40.985	-0.043697					176	46	5	0	0	0	0.69914	1	2822	2822		40.573	7.057	1	3943300			11141	13707	7816	7824	12706	12706					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77947998046875	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.67235	2	3790	3790;3835		42.474	8.9589	1	2468400			11142	13707	7816	7824	12707;12708	12707					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801513671875	2	434.778754	867.542954	-0.14051	-6.1091E-05	3.4383	0.0014949	3.2978	0.0014338	434.7801225093181	38.257	1.3722	38.268	37.812	39.184	0.011173					116	31	4	0	0	0	0.77546	1	2696	2696		31.955	5.1588	1	2138600			11143	13707	7816	7824	12709	12709					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801513671875	2	434.778754	867.542954	0.085891	3.7343E-05	2.526	0.0010983	2.6119	0.0011356	434.77973178522114	39.697	1.6335	39.706	39.141	40.774	0.0092812					137	39	4	0	0	0	0.72402	1	2790	2790		38.806	3.6054	1	4100400			11144	13707	7816	7824	12710	12710					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7796325683594	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.69914	1	3237	3237		40.573	5.3719	1	2766200			11145	13707	7816	7824	12711	12711					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7797546386719	2	434.778754	867.542954	1.3776	0.00059897	1.1215	0.0004876	2.4991	0.0010866	434.7791184687597	46.776	1.6866	46.772	46.112	47.798	-0.0041618					148	47	4	0	0	0	0.76996	3	3814	3779;3814;3838		33.516	6.7195	1	2109000			11146	13707	7816	7824	12712;12713;12714	12713					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77996826171875	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.72402	1	4053	4053		38.806	1.647	1	1803700			11147	13707	7816	7824	12715	12715					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7796630859375	2	434.778754	867.542954	-1.6369	-0.00071169	4.2666	0.001855	2.6297	0.0011433	434.7804825082367	43.238	1.5673	43.244	42.525	44.093	0.0057526					133	41	4	0	0	0	0.76996	1	3071	3071		33.516	1.5607	1	2391100			11148	13707	7816	7824	12716	12716					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7796936035156	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.69914	1	3409	3409		40.573	5.3719	1	2364100			11149	13707	7816	7824	12717	12717					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7792663574219	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.77546	1	3542	3542		31.955	0	1	1959200			11150	13707	7816	7824	12718	12718					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77996826171875	2	434.778754	867.542954	0.13638	5.9295E-05	3.2501	0.0014131	3.3864	0.0014724	434.7800361226264	34.243	0.88012	34.352	33.821	34.701	0.10829					118	39	4	0	0	0	0.72402	1	1694	1694		38.806	5.2906	1	2838300			11151	13707	7816	7824	12719	12719					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801208496094	2	434.778754	867.542954	0.18498	8.0427E-05	2.9584	0.0012863	3.1434	0.0013667	434.7799222967292	39.501	1.6389	39.589	38.953	40.592	0.088375					151	45	4	0	0	0	0.7932	1	2488	2488		25.45	1.2474	1	4736600			11152	13707	7816	7824	12720	12720					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7798156738281	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.78058	1	2732	2732		30.504	5.0535	1	2513700			11153	13707	7816	7824	12721	12721					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7790832519531	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.7932	1	3306	3306		24.203	3.7209	1	1327200			11154	13707	7816	7824	12722	12722					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77935791015625	2	434.778754	867.542954	-0.10818	-4.7034E-05	3.1846	0.0013846	3.0765	0.0013376	434.7800213108271	39.594	1.7303	39.546	38.941	40.672	-0.04789					162	53	5	0	0	0	0.69914	1	2519	2519		40.573	10.069	1	5065300			11155	13707	7816	7824	12723	12723					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77960205078125	2	434.778754	867.542954	-0.23402	-0.00010175	2.835	0.0012326	2.601	0.0011308	434.77987896985167	43.157	1.7547	43.107	42.38	44.135	-0.050308					136	44	4	0	0	0	0.76996	2	2996	2996;3044		33.516	1.5607	1	2479900			11156	13707	7816	7824	12724;12725	12724					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799072265625	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.58151	1	3381	3381		47.916	5.4411	1	2833200			11157	13707	7816	7824	12726	12726					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.78021240234375	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.69914	2	2479	2443;2479		40.573	7.057	1	8013100			11158	13707	7816	7824	12727;12728	12728					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7806396484375	2	434.778754	867.542954	-0.30995	-0.00013476	4.1464	0.0018027	3.8364	0.001668	434.78044491218617	37.836	1.2567	38.149	37.864	39.121	0.31312					114	31	4	0	0	0	0.76996	5	3074	3041;3074;3085;3121;3133		33.516	5.2613	1	8178800			11159	13707	7816	7824	12729;12730;12731;12732;12733	12730					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7796325683594	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.76996	2	3338	3338;3386		33.516	6.7195	1	17256000			11160	13707	7816	7824	12734;12735	12734					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7806396484375	2	434.778754	867.542954	0.24981	0.00010861	3.5134	0.0015276	3.7632	0.0016362	434.78017285768743	37.739	1.2173	38.259	37.943	39.16	0.51989					114	30	4	0	0	0	0.67235	2	3074	3074;3085		42.474	7.2737	1	8689200			11161	13707	7816	7824	12736;12737	12736					0.10388447425282266
GILTVGPLV	9	Unmodified	_GILTVGPLV_					0	0	0		ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	ENST00000553851.2_1_X:48928815-48929193:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77783203125	2	434.778754	867.542954	-0.91901	-0.00039957	3.2028	0.0013925	2.2837	0.00099292	434.7800246732522	44.2	1.4198	45.044	44.534	45.954	0.84437					118	34	4	0	0	0	0.78058	1	4011	4011		30.504	5.0535	1	4932000			11162	13707	7816	7824	12738	12738					0.10388447425282266
GILVALPVG	9	Unmodified	_GILVALPVG_					0	0	0		ENST00000355379.3_1_1:155231889-155232135:-|nuORF	ENST00000355379.3_1_1:155231889-155232135:-|nuORF	ENST00000355379.3_1_1:155231889-155232135:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7732849121094	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.78292	1	3607	3607		29.842	0.69198	1	184570000			11163	10351	7817	7825	12739	12739					0.10712464770847419
GILVLEPQ	8	Unmodified	_GILVLEPQ_					0	0	0		ENSG00000146834|ENST00000310512|MEPCE;nc|ENSG00000289690|Q7L2J0-2|MEPCE	ENSG00000146834|ENST00000310512|MEPCE	ENSG00000146834|ENST00000310512|MEPCE	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.78033447265625	2	434.760561	867.506569	-1.8929	-0.00082294	3.6845	0.0016019	1.7916	0.00077892	434.7622782280892	39.265	0.14758	39.265	39.19	39.337	0					5	3	2	0	0	0	0.4196	1	2498	2498		42.474	14.22	1	15217			11164	4862	7818	7826	12740	12740					0.06751570528581397
GILVNVPL	8	Unmodified	_GILVNVPL_					0	0	0		ENST00000372916.8_1_X:100500413-100506073:+|nuORF;nc|ENSG00000102385|Q13474-2|DRP2;ENSG00000102385|ENST00000395209|DRP2	ENST00000372916.8_1_X:100500413-100506073:+|nuORF	ENST00000372916.8_1_X:100500413-100506073:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7669677734375	2	412.765646	823.516739	-1.2234	-0.00050499	3.8954	0.0016079	2.6719	0.0011029	412.7673243915212	41.944	1.8566	41.905	41.33	43.186	-0.038223					75	44	2	0	0	0	0.9159	1	3190	3190		44.531	5.7249	1	796850			11165	2002	7819	7827	12741	12741					0.09792178253815109
GILVNVPL	8	Unmodified	_GILVNVPL_					0	0	0		ENST00000372916.8_1_X:100500413-100506073:+|nuORF;nc|ENSG00000102385|Q13474-2|DRP2;ENSG00000102385|ENST00000395209|DRP2	ENST00000372916.8_1_X:100500413-100506073:+|nuORF	ENST00000372916.8_1_X:100500413-100506073:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26776123046875	2	412.765646	823.516739	0.29216	0.00012059	0.97906	0.00040412	1.2712	0.00052472	412.7669032783796	51.677	2.3681	51.737	50.932	53.3	0.059719					122	72	2	0	0	0	0.83466	1	4089	4089		23.037	1.3344	1	250130			11166	2002	7819	7827	12742	12742					0.09792178253815109
GILWPLGL	8	Unmodified	_GILWPLGL_					0	0	0			REV__ENST00000460696.1_1_1:5923922-5924763:-|nuORF	REV__ENST00000460696.1_1_1:5923922-5924763:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801208496094	2	434.768189	867.521825	0.051086	2.2211E-05	-0.019033	-8.2749E-06	0.032053	1.3936E-05	434.76833151549965	39.699	0.25865	39.708	39.557	39.815	0.0092773					7	5	2	0	0	0	0.4196	1	2803	2803		43.626	0	1	60182	+		11167	27014	7820	7828	12743	12743					0.08276482116411898
GIMRSKKPKKH	11	Unmodified	_GIMRSKKPKKH_					0	0	0		ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.6023864746094	3	437.267691	1308.78124	-0.73822	-0.0003228	1.1348	0.00049623	0.39662	0.00017343	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.76579	1	4733	4733		18.531	0	1	3639500			11168	3049	7821	7829	12744	12744					0.13920484735899663
GIMRSKKPKKH	11	Unmodified	_GIMRSKKPKKH_					0	0	0		ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.602783203125	3	437.267691	1308.78124	-0.68964	-0.00030156	0.92735	0.0004055	0.23771	0.00010394	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.74771	1	4950	4950		22.562	3.2989	1	2651700			11169	3049	7821	7829	12745	12745					0.13920484735899663
GIMRSKKPKKH	11	Unmodified	_GIMRSKKPKKH_					0	0	0		ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2678527832031	3	437.267691	1308.78124	-0.49223	-0.00021524	0.94558	0.00041347	0.45335	0.00019824	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.74022	1	4076	4076		24.232	0	1	3262400			11170	3049	7821	7829	12746	12746					0.13920484735899663
GINRIMFS	8	Oxidation (M)	_GINRIM(Oxidation (M))FS_		GINRIM(1)FS		GINRIM(74)FS	0	0	1			REV__ENST00000550231.1_1_12:110834171-110883338:-|nuORF	REV__ENST00000550231.1_1_12:110834171-110883338:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.24664306640625	2	477.247295	952.480036	0.42784	0.00020419	-2.0067	-0.00095767	-1.5788	-0.00075348	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.5397	1	7067	7067		73.975	13.003	1	2278400	+		11171	28595	7822	7830	12747	12747		422			0.0018955836559371164
GINVVLLP	8	Unmodified	_GINVVLLP_					0	0	0			REV__ENSG00000120137|ENST00000239231|PANK3	REV__ENSG00000120137|ENST00000239231|PANK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7667236328125	2	412.765646	823.516739	-0.33758	-0.00013934	2.1313	0.00087971	1.7937	0.00074037	412.7669144536039	43.714	1.8956	43.657	42.672	44.567	-0.056812					93	46	3	0	0	0	0.82464	1	3033	3033		21.702	0	1	313210	+		11172	18399	7823	7831	12748	12748					0.09792178253815109
GIPKKKKA	8	Unmodified	_GIPKKKKA_					0	0	0		ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3001403808594	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.82419	1	6752	6752		13.775	0.81615	1	1680500			11173	3456	7824	7832	12749	12749					0.14627262273359065
GIPKKKKA	8	Unmodified	_GIPKKKKA_					0	0	0		ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30023193359375	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.82419	3	6982	6982;7007;7070		13.775	3.4886	1	1921500			11174	3456	7824	7832	12750;12751;12752	12750					0.14627262273359065
GIPKKKKA	8	Unmodified	_GIPKKKKA_					0	0	0		ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2999267578125	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.81548	1	7010	7010		20.482	1.1219	1	2081500			11175	3456	7824	7832	12753	12753					0.14627262273359065
GIPKKKKA	8	Unmodified	_GIPKKKKA_					0	0	0		ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002624511719	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.81724	4	7859	7823;7859;8051;8161		14.664	5.1935	1	5485100			11176	3456	7824	7832	12754;12755;12756;12757	12755					0.14627262273359065
GIPKKKKA	8	Unmodified	_GIPKKKKA_					0	0	0		ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2999267578125	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.82419	2	7688	7688;8664		24.203	5.544	1	6323600			11177	3456	7824	7832	12758;12759	12758					0.14627262273359065
GIPRGRPGP	9	Unmodified	_GIPRGRPGP_					0	0	0		ENST00000489664.1_1_1:156024680-156025387:+|nuORF	ENST00000489664.1_1_1:156024680-156025387:+|nuORF	ENST00000489664.1_1_1:156024680-156025387:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.766845703125	2	453.767043	905.519533	0.22799	0.00010345	-2.741	-0.0012438	-2.5131	-0.0011403	453.76577882768925	41.923	1.745	41.996	41.584	43.329	0.073414					97	46	4	0	0	0	0.77546	1	2831	2831		31.955	0	1	672610			11178	12657	7825	7833	12760	12760					0.06299446431319211
GIPRSVIIEVQ	11	Unmodified	_GIPRSVIIEVQ_					0	0	0			REV__ENSG00000079841|ENST00000521978|RIMS1	REV__ENSG00000079841|ENST00000521978|RIMS1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2445068359375	3	404.243317	1209.70812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.982	1	30.971	30.471	31.471	-0.010656								0	0	0	0.56276	1	1661	1661		35.178	7.0967	1		+		11179	16792	7826	7834	12761	12761					0.11165634494273036
GIPVHLETME	10	Unmodified	_GIPVHLETME_					0	0	0		ENST00000475972.1_1_3:136705553-136729062:+|nuORF;ENSG00000174564|ENST00000329582|IL20RB	ENST00000475972.1_1_3:136705553-136729062:+|nuORF	ENST00000475972.1_1_3:136705553-136729062:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.2875366210938	2	563.284074	1124.5536	3.058	0.0017225	2.3594	0.001329	5.4174	0.0030515	563.2854378173162	111.25	0.85882	111.22	110.91	111.76	-0.026314					51	32	2	0	0	0	0.86452	1	12327	12327		30.504	1.3541	1	99042			11180	6945	7827	7835	12762	12762					-0.003699379825775395
GIQIKRAN	8	Unmodified	_GIQIKRAN_					0	0	0			REV__ENSG00000112031|ENST00000367233|MTRF1L	REV__ENSG00000112031|ENST00000367233|MTRF1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2747497558594	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.884	1	9857	9857		33.516	9.3128	1	47650000	+		11181	17910	7828	7836	12763	12763					0.08152313228504227
GIQQVNRF	8	Unmodified	_GIQQVNRF_					0	0	0			REV__ENSG00000099821|ENST00000588649|POLRMT;REV__ENST00000578759.1_1_17:60214444-60217453:-|nuORF	REV__ENST00000578759.1_1_17:60214444-60217453:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.2785949707031	2	481.264333	960.514114	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.542	1	67.542	67.042	68.042	0								0	0	0	0.29452	1	5973	5973		33.516	1.5607	1		+		11182	17107;29028	7829	7837	12764	12764					0.032277228488510445
GIRDLKLGF	9	Unmodified	_GIRDLKLGF_					0	0	0			REV__ENSG00000163273|ENST00000409852|NPPC	REV__ENSG00000163273|ENST00000409852|NPPC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8037414550781	2	509.805834	1017.59712	-0.38176	-0.00019462	-3.8277	-0.0019514	-4.2095	-0.002146	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.78536	1	8293	8293		29.15	1.2673	1	948010	+		11183	20891	7830	7838	12765	12765					0.08902039576844345
GIRDLKLGF	9	Unmodified	_GIRDLKLGF_					0	0	0			REV__ENSG00000163273|ENST00000409852|NPPC	REV__ENSG00000163273|ENST00000409852|NPPC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8046569824219	2	509.805834	1017.59712	1.843	0.00093957	-3.68	-0.0018761	-1.837	-0.0009365	509.8038512038083	102.42	0.60625	102.68	102.27	102.88	0.26322					25	14	2	0	0	0	0.78983	1	12431	12431		27.882	5.3026	1	195020	+		11184	20891	7830	7838	12766	12766					0.08902039576844345
GIRDLKLGF	9	Unmodified	_GIRDLKLGF_					0	0	0			REV__ENSG00000163273|ENST00000409852|NPPC	REV__ENSG00000163273|ENST00000409852|NPPC	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	509.805834	1017.59712	-0.053256	-2.715E-05	-3.7599	-0.0019168	-3.8131	-0.001944	510.305617364139	102.72	0.21023	102.73	102.67	102.88	0.0082016	0.042929	0.00061465	NaN	27.882	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25642	+		11185	20891	7830	7838							0.08902039576844345
GIRDLKLGF	9	Unmodified	_GIRDLKLGF_					0	0	0			REV__ENSG00000163273|ENST00000409852|NPPC	REV__ENSG00000163273|ENST00000409852|NPPC	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	509.805834	1017.59712	3.4929	0.0017807	-5.3065	-0.0027053	-1.8136	-0.00092459	509.80302550959686	102.35	0.63708	102.64	102.26	102.9	0.29865	-0.040584	-0.00096231	NaN	27.882	26	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	271360	+		11186	20891	7830	7838							0.08902039576844345
GIRFKFPKN	9	Unmodified	_GIRFKFPKN_					0	0	0			REV__nc|ENSG00000119782|P68106-2|FKBP1B	REV__nc|ENSG00000119782|P68106-2|FKBP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.83056640625	2	553.827101	1105.63965	1.198	0.00066348	4.1034	0.0022726	5.3014	0.002936	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.78058	1	8955	8955		30.504	3.7075	1	1689700	+		11187	18379	7831	7839	12767	12767					0.09105434705088555
GIRGFRAV	8	Unmodified	_GIRGFRAV_					0	0	0			REV__chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	REV__chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633972167969	2	438.264136	874.51372	-1.0936	-0.00047928	-0.34853	-0.00015275	-1.4421	-0.00063203	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.90465	1	2519	2519		40.573	1.3198	1	2862500	+		11188	15552	7832	7840	12768	12768					0.07144347919643224
GIRGFRAV	8	Unmodified	_GIRGFRAV_					0	0	0			REV__chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	REV__chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2635803222656	2	438.264136	874.51372	1.5783	0.00069171	-3.9402	-0.0017268	-2.3619	-0.0010351	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.91005	1	2785	2785		42.474	0	1	92475000	+		11189	15552	7832	7840	12769	12769					0.07144347919643224
GIRGTPKVRA	10	Unmodified	_GIRGTPKVRA_					0	0	0		ENSG00000107957|ENST00000369774|SH3PXD2A;nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A;nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A	ENSG00000107957|ENST00000369774|SH3PXD2A	ENSG00000107957|ENST00000369774|SH3PXD2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.3274536132812	2	527.827632	1053.64071	0.34502	0.00018211	-1.6315	-0.00086114	-1.2865	-0.00067903	528.3275702450917	46.707	1.5762	46.703	46.198	47.774	-0.0041618					64	44	2	0	0	0	0.78666	1	3760	3760		40.058	2.8991	1	335160			11190	2383	7833	7841	12770	12770					0.11603649074004352
GIRGYMIVILS	11	Unmodified	_GIRGYMIVILS_					0	0	0			REV__ENST00000506359.1_1_4:73012322-73013526:+|nuORF	REV__ENST00000506359.1_1_4:73012322-73013526:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3550415039062	2	611.354834	1220.69511	0.85003	0.00051967	1.0308	0.00063016	1.8808	0.0011498	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.70737	1	9483	9483		30.318	1.1477	1	6836400	+		11191	15837	7834	7842	12771	12771					0.09359480110538243
GIRLLENPRLG	11	Unmodified	_GIRLLENPRLG_					0	0	0		nc|ENSG00000154721|P57087-2|JAM2;ENSG00000154721|ENST00000480456|JAM2;nc|ENSG00000154721|P57087-3|JAM2	nc|ENSG00000154721|P57087-2|JAM2	nc|ENSG00000154721|P57087-2|JAM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.3723754882812	2	619.372404	1236.73025	0.60184	0.00037276	-0.93131	-0.00057683	-0.32947	-0.00020406	619.3721424545147	101.51	1.6945	101.55	101.22	102.91	0.044823					109	40	4	0	0	0	0.7144	1	10925	10925		29.17	1.0886	1	2715800			11192	5289	7835	7843	12772	12772					0.12135858962687962
GIRLLFGLH	9	Unmodified	_GIRLLFGLH_					0	0	0			REV__ENST00000374072.5_1_20:34287595-34288825:+|nuORF	REV__ENST00000374072.5_1_20:34287595-34288825:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.317138671875	2	513.316369	1024.61818	-1.3651	-0.00070072	2.2159	0.0011375	0.85085	0.00043675	513.3175456130648	53.876	2.1608	53.876	52.509	54.67	0					97	64	3	0	0	0	0.7932	1	4518	4518		24.203	4.8428	1	276500	+		11193	25782	7836	7844	12773	12773					0.10686049676360199
GIRLLFGLH	9	Unmodified	_GIRLLFGLH_					0	0	0			REV__ENST00000374072.5_1_20:34287595-34288825:+|nuORF	REV__ENST00000374072.5_1_20:34287595-34288825:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3173217773438	2	513.316369	1024.61818	0.39078	0.00020059	0.13512	6.936E-05	0.5259	0.00026995	513.3164630994114	53.539	1.8096	53.62	52.959	54.769	0.081528					78	48	3	0	0	0	0.7932	1	4383	4383		24.203	3.2558	1	262680	+		11194	25782	7836	7844	12774	12774					0.10686049676360199
GIRLPRIRRWR	11	Unmodified	_GIRLPRIRRWR_					0	0	0		nc|ENSG00000169955|Q9BV97-2|ZNF747;nc|ENSG00000169955|Q9BV97-1|ZNF747	nc|ENSG00000169955|Q9BV97-2|ZNF747	nc|ENSG00000169955|Q9BV97-2|ZNF747	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.65020751953125	3	493.647894	1477.92185	-0.87644	-0.00043265	4.4526	0.002198	3.5762	0.0017654	493.64998188310005	44.669	3.6346	44.636	43.623	47.257	-0.033474					240	86	4	0	0	0	0.85439	1	3523	3523		5.6988	2.2901	1	495450			11195	15085	7837	7845	12775	12775					0.2020082450433165
GIRLPRIRRWR	11	Unmodified	_GIRLPRIRRWR_					0	0	0		nc|ENSG00000169955|Q9BV97-2|ZNF747;nc|ENSG00000169955|Q9BV97-1|ZNF747	nc|ENSG00000169955|Q9BV97-2|ZNF747	nc|ENSG00000169955|Q9BV97-2|ZNF747	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.6507568359375	3	493.647894	1477.92185	-0.090194	-4.4524E-05	3.7222	0.0018375	3.632	0.0017929	493.64966914482096	44.463	1.6429	44.405	43.685	45.328	-0.058258					115	39	4	0	0	0	0.81219	1	3074	3074		8.7993	2.4784	1	603320			11196	15085	7837	7845	12776	12776					0.2020082450433165
GIRNREVLNVL	11	Unmodified	_GIRNREVLNVL_					0	0	0			REV__nc|ENSG00000058056|Q92995-2|USP13	REV__nc|ENSG00000058056|Q92995-2|USP13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8823852539062	2	641.883136	1281.75172	-0.046992	-3.0164E-05	-0.94307	-0.00060534	-0.99006	-0.0006355	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.72106	1	9827	9827		28.081	2.0181	1	2217900	+		11197	16431	7838	7846	12777	12777					0.12211243991418996
GIRPAFMCY	9	Unmodified	_GIRPAFMCY_					0	0	0		nc|ENSG00000165689|Q96C92-2|ENTR1;ENSG00000165689|ENST00000357365|ENTR1	nc|ENSG00000165689|Q96C92-2|ENTR1	nc|ENSG00000165689|Q96C92-2|ENTR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.2523193359375	2	529.251523	1056.48849	-0.0069052	-3.6546E-06	2.3748	0.0012569	2.3679	0.0012532	529.2526334627889	35.565	0.45536	35.553	35.381	35.836	-0.012203					17	9	2	0	0	0	0.72402	1	2233	2233		38.806	1.7777	1	81127			11198	6113	7839	7847	12778	12778					-0.03749210989440144
GIRPAPGYP	9	Unmodified	_GIRPAPGYP_					0	0	0		ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR;ENST00000470570.1_1_1:237058450-237060941:+|nuORF	ENSG00000116984|ENST00000366577|MTR	ENSG00000116984|ENST00000366577|MTR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25469970703125	2	464.255977	926.497401	-1.1813	-0.00054845	-2.9805	-0.0013837	-4.1619	-0.0019322	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.76996	1	8125	8125		33.516	1.5607	1	946850			11199	2957	7840	7848	12779	12779					0.03121221962896925
GIRQLSQSL	9	Unmodified	_GIRQLSQSL_					0	0	0		nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF	nc|ENSG00000137713|P30154-2|PPP2R1B	nc|ENSG00000137713|P30154-2|PPP2R1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.29034423828125	2	501.290548	1000.56654	-0.50311	-0.0002522	0.25574	0.0001282	-0.24737	-0.000124	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.73802	1	8536	8536		37.812	0	1	10459000			11200	14944	7841	7849	12780	12780					0.06628261191815454
GIRQLSQSL	9	Unmodified	_GIRQLSQSL_					0	0	0		nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF	nc|ENSG00000137713|P30154-2|PPP2R1B	nc|ENSG00000137713|P30154-2|PPP2R1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.290283203125	2	501.290548	1000.56654	0.65622	0.00032896	-1.0593	-0.000531	-0.40304	-0.00020204	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.71772	1	8187	8187		39.253	5.0803	1	2931000			11201	14944	7841	7849	12781	12781					0.06628261191815454
GIRSHLHITTG	11	Unmodified	_GIRSHLHITTG_					0	0	0		ENST00000358043.5_1_14:23239749-23239833:+|nuORF	ENST00000358043.5_1_14:23239749-23239833:+|nuORF	ENST00000358043.5_1_14:23239749-23239833:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.3329467773438	2	596.333279	1190.652	-1.3013	-0.00077598	0.61641	0.00036758	-0.68485	-0.0004084	596.3335316328556	96.129	3.5172	96.331	95.353	98.87	0.20242					227	81	4	0	0	0	0.69248	1	9792	9792		32.751	3.601	1	1353000			11202	10401	7842	7850	12782	12782					0.06430426377460208
GIRSLRPT	8	Unmodified	_GIRSLRPT_					0	0	0		nc|ENSG00000164327|Q6R327-3|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2748718261719	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.87064	2	10062	9812;10062		30.504	5.0535	1	51820000			11203	15058	7843	7851	12783;12784	12784					0.08152313228526964
GIRSLRPT	8	Unmodified	_GIRSLRPT_					0	0	0		nc|ENSG00000164327|Q6R327-3|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.27410888671875	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.8347	1	10016	10016		23.042	2.5607	1	51698000			11204	15058	7843	7851	12785	12785					0.08152313228526964
GIRSSIAHS	9	Unmodified	_GIRSSIAHS_					0	0	0		nc|ENSG00000124191|Q96NM4-3|TOX2;nc|ENSG00000124191|Q96NM4|TOX2;ENSG00000124191|ENST00000341197|TOX2;nc|ENSG00000124191|Q96NM4-2|TOX2	nc|ENSG00000124191|Q96NM4-3|TOX2	nc|ENSG00000124191|Q96NM4-3|TOX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.25384521484375	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.76255	1	9697	9697		35.618	1.4457	1	1215000			11205	3313	7844	7852	12786	12786					0.027191324691898444
GIRVAGVPGN	10	Unmodified	_GIRVAGVPGN_					0	0	0			REV__ENSG00000138035|ENST00000447944|PNPT1	REV__ENSG00000138035|ENST00000447944|PNPT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.27197265625	2	470.272158	938.529764	0.099415	4.6752E-05	-0.22805	-0.00010725	-0.12864	-6.0495E-05	470.2720226453988	92.144	2.4368	92.19	91.141	93.578	0.045456					134	57	4	0	0	0	0.86763	1	9650	9650		26.693	1.2427	1	1955400	+		11206	19431	7845	7853	12787	12787					0.05804009365908769
GIRWVSPK	8	Unmodified	_GIRWVSPK_					0	0	0			REV__ENST00000468090.5_1_21:45181177-45181723:+|nuORF	REV__ENST00000468090.5_1_21:45181177-45181723:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7767028808594	2	471.779619	941.544686	-0.41023	-0.00019354	-3.81	-0.0017975	-4.2202	-0.001991	471.77765730903536	17.083	0.4468	16.472	16.305	16.752	-0.6107					15	9	2	0	0	0	0.93786	1	211	211		53.351	10.877	1	77633	+		11207	27176	7846	7854	12788	12788					0.07157501233893981
GISGGSSSSS	10	Unmodified	_GISGGSSSSS_					0	0	0		ENSG00000185974|ENST00000335678|GRK1	ENSG00000185974|ENST00000335678|GRK1	ENSG00000185974|ENST00000335678|GRK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.18359375	2	413.182872	824.35119	2.3001	0.00095037	-1.5602	-0.00064463	0.73996	0.00030574	413.18257983004736	99.112	0.94866	99.474	99.096	100.04	0.36137					76	23	5	0	0	0	0.86589	1	11924	11924		29.15	0	1	10767000			11208	7765	7847	7855	12789	12789					-0.06801125063645941
GISHVPKP	8	Unmodified	_GISHVPKP_					0	0	0		ENSG00000173517|ENST00000682557|PEAK1	ENSG00000173517|ENST00000682557|PEAK1	ENSG00000173517|ENST00000682557|PEAK1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.7417907714844	2	417.745245	833.475937	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.635	1	27.704	27.204	28.204	0.06868								0	0	0	0.29631	1	1109	1109		25.45	2.4135	1				11209	6863	7848	7856	12790	12790					0.05253836934184619
GISIHRSTG	9	Unmodified	_GISIHRSTG_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2530212402344	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.76255	1	8629	8629		35.618	0	1	1449300	+		11210	21676	7849	7857	12791	12791					0.027191324691898444
GISIIFWRK	9	Unmodified	_GISIIFWRK_					0	0	0			REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|59|2|sense	REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|59|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8412475585938	2	560.337301	1118.66005	3.1443	0.0017619	2.2418	0.0012561	5.3861	0.003018	560.3384666398667	114.11	1.1832	114.09	113.68	114.86	-0.024452					78	42	3	0	0	0	0.7932	1	12685	12685		21.96	0	1	283760	+		11211	29654	7850	7858	12792	12792					0.10546605364879724
GISIKPLYSK	10	Unmodified	_GISIKPLYSK_					0	0	0		ENSG00000146085|ENST00000274813|MMUT	ENSG00000146085|ENST00000274813|MMUT	ENSG00000146085|ENST00000274813|MMUT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.33251953125	2	553.334424	1104.6543	0.28517	0.0001578	-3.9073	-0.002162	-3.6221	-0.0020042	553.3321125200671	96.704	2.3133	96.935	96.395	98.708	0.23103					137	53	4	0	0	0	0.86587	1	9990	9990		29.17	0.020503	1	3367100			11212	4819	7851	7859	12793	12793					0.10615462062560255
GISILYRKPN	10	Unmodified	_GISILYRKPN_					0	0	0		nc|ENSG00000171189|P39086-2|GRIK1;nc|ENSG00000171189|P39086|GRIK1;ENSG00000171189|ENST00000327783|GRIK1;nc|ENSG00000164418|Q13002-3|GRIK2;nc|ENSG00000164418|Q13002-2|GRIK2;nc|ENSG00000164418|Q13002-5|GRIK2;nc|ENSG00000164418|Q13002-4|GRIK2;ENSG00000164418|ENST00000369134|GRIK2	nc|ENSG00000171189|P39086-2|GRIK1;nc|ENSG00000164418|Q13002-4|GRIK2	nc|ENSG00000164418|Q13002-4|GRIK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.8409423828125	2	580.842948	1159.67134	-0.43283	-0.00025141	-3.7117	-0.0021559	-4.1445	-0.0024073	580.8405993802119	69.859	0.92783	69.822	69.57	70.498	-0.036957					124	48	3	0	0	0	0.82886	1	6750	6750		37.812	2.1932	1	18374000			11213	6643;5965	7852	7860	12794	12794					0.09789382668373037
GISLTKTN	8	Unmodified	_GISLTKTN_					0	0	0			REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.2392883300781	2	417.239993	832.465432	-0.18702	-7.8031E-05	-1.9097	-0.00079681	-2.0967	-0.00087484	417.23903257482436	88.499	3.1931	88.567	87.962	91.155	0.068161					142	75	3	0	0	0	0.86677	1	9006	9006		27.882	1.1893	1	1475100	+		11214	16532	7853	7861	12795	12795					0.042498094890902394
GISPWGAR	8	Unmodified	_GISPWGAR_					0	0	0		ENST00000290913.7_2_3:126423105-126445939:+|nuORF	ENST00000290913.7_2_3:126423105-126445939:+|nuORF	ENST00000290913.7_2_3:126423105-126445939:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2281799316406	2	422.22722	842.439886	0.39883	0.0001684	1.4479	0.00061135	1.8467	0.00077975	422.22774353929225	63.715	1.0414	63.837	63.015	64.056	0.12252					65	43	2	0	0	0	0.92457	1	5608	5608		47.916	10.756	1	281200			11215	9675	7854	7862	12796	12796					0.012363797573243573
GISRRKSL	8	Unmodified	_GISRRKSL_					0	0	0			REV__nc|ENSG00000084710|Q9Y2G0-2|EFR3B	REV__nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	458.78765869140625	2	458.787976	915.561398	-1.0758	-0.00049355	0.12952	5.9424E-05	-0.94624	-0.00043412	458.7880145411106	93.372	3.7853	93.372	92.851	96.637	0					181	88	4	0	0	0	0.89043	1	9259	9259		35.618	1.4457	1	6725700	+		11216	16880	7855	7863	12797	12797					0.10024002119860143
GISSKKVLW	9	Unmodified	_GISSKKVLW_					0	0	0			REV__ENSG00000180917|ENST00000434935|CMTR2	REV__ENSG00000180917|ENST00000434935|CMTR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.22283935546875	2	509.30821	1016.60187	0.22242	0.00011328	-4.4724	-0.0022778	-4.2499	-0.0021645	509.3057747987958	92.885	1.4312	93.335	92.732	94.163	0.44988					93	33	4	0	0	0	0.20789	1	11116	11116		44.117	31.305	1	968200	+		11217	22426	7856	7864	12798	12798					0.09422923719614573
GISSLKVWTSH	11	Unmodified	_GISSLKVWTSH_					0	0	0		nc|ENSG00000158571|P16118-2|PFKFB1;ENSG00000158571|ENST00000375006|PFKFB1	nc|ENSG00000158571|P16118-2|PFKFB1	nc|ENSG00000158571|P16118-2|PFKFB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2566223144531	3	405.555784	1213.64552	0.50414	0.00020446	1.849	0.00074989	2.3532	0.00095435	405.5565073349063	44.368	0.84918	44.819	44.442	45.292	0.45025					30	20	2	0	0	0	0.17521	1	4061	4061		17.167	2.4731	1	390680			11218	5489	7857	7865	12799	12799					0.04724488426086282
GISTFPPGLLS	11	Unmodified	_GISTFPPGLLS_					0	0	0		ENST00000511624.1_1_5:108744869-108744998:-|nuORF	ENST00000511624.1_1_5:108744869-108744998:-|nuORF	ENST00000511624.1_1_5:108744869-108744998:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	544.7939453125	2	544.802957	1087.59136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.967	1	50.875	50.375	51.375	-0.091797								0	0	0	0.56276	1	4036	4036		36.447	1.2947	1				11219	13022	7858	7866	12800	12800					0.05106896274514838
GISTRGKLAA	10	Unmodified	_GISTRGKLAA_					0	0	0		ENST00000485715.2_1_22:20024321-20049197:+|nuORF;ENST00000484373.5_1_22:20024321-20041279:+|nuORF;nc|ENSG00000183597|Q6ICL3-6|TANGO2;nc|ENSG00000183597|Q6ICL3-2|TANGO2;nc|ENSG00000183597|Q6ICL3-3|TANGO2;ENSG00000183597|ENST00000327374|TANGO2;nc|ENSG00000183597|Q6ICL3-4|TANGO2	ENST00000485715.2_1_22:20024321-20049197:+|nuORF	ENST00000485715.2_1_22:20024321-20049197:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.2924499511719	2	487.293091	972.571629	-0.95487	-0.0004653	1.1127	0.0005422	0.1578	7.6897E-05	487.2935206291715	91.355	2.0771	91.355	90.861	92.938	0					114	48	4	0	0	0	0.86471	1	8896	8896		30.318	2.4355	1	1437600			11220	7544	7859	7867	12801	12801					0.08424565054417599
GISTRLSPKIH	11	Unmodified	_GISTRLSPKIH_					0	0	0			REV__nc|ENSG00000147874|Q7Z4H7-3|HAUS6	REV__nc|ENSG00000147874|Q7Z4H7-3|HAUS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.57513427734375	3	403.575178	1207.70371	0.5494	0.00022172	-1.2677	-0.0005116	-0.71827	-0.00028987	403.5745990745283	80.411	1.2826	80.552	79.622	80.904	0.14118					87	49	3	0	0	0	0.71207	1	7669	7669		29.551	0	1	245600	+		11221	20089	7860	7868	12802	12802					0.10816170071370834
GITPRRLY	8	Unmodified	_GITPRRLY_					0	0	0			REV__ENST00000541990.5_1_1:155170782-155174851:-|nuORF	REV__ENST00000541990.5_1_1:155170782-155174851:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.2364807128906	2	488.290351	974.566149	-1.2334	-0.00060228	3.4942	0.0017062	2.2607	0.0011039	488.2926776679887	57.963	2.1976	58.357	57.697	59.894	0.39407					69	53	2	0	0	0	0.4196	1	5965	5965		57.811	17.033	1	785060	+		11222	28492	7861	7869	12803	12803					0.07784886262618329
GITPRRLY	8	Unmodified	_GITPRRLY_					0	0	0			REV__ENST00000541990.5_1_1:155170782-155174851:-|nuORF	REV__ENST00000541990.5_1_1:155170782-155174851:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	488.290351	974.566149	0.18014	8.796E-05	1.8265	0.00089186	2.0066	0.00097982	488.291817046819	57.814	1.8417	58.367	58.001	59.843	0.55323	0.0050676	-0.00079377	NaN	47.916	58	45	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	864150	+		11223	28492	7861	7869							0.07784886262618329
GIVGAHFV	8	Unmodified	_GIVGAHFV_					0	0	0			REV__ENSG00000185085|ENST00000330574|INTS5	REV__ENSG00000185085|ENST00000330574|INTS5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2287902832031	2	400.226688	798.438824	1.1221	0.00044908	1.5017	0.000601	2.6237	0.0010501	400.22744040827075	52.487	1.5647	52.911	52.149	53.713	0.42348					74	37	3	0	0	0	0.88393	1	5231	5231		33.493	8.989	1	9430900	+		11224	22735	7862	7870	12804	12804					0.0315416538842328
GIVGAHFV	8	Unmodified	_GIVGAHFV_					0	0	0			REV__ENSG00000185085|ENST00000330574|INTS5	REV__ENSG00000185085|ENST00000330574|INTS5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	400.226688	798.438824	-0.67068	-0.00026843	4.8171	0.0019279	4.1464	0.0016595	400.2285658593774	52.657	0.62939	52.583	52.175	52.804	-0.074512	-0.21664	0.0012328	NaN	33.493	23	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102670	+		11225	22735	7862	7870							0.0315416538842328
GIVGMFVKLR	10	Unmodified	_GIVGMFVKLR_					0	0	0		ENST00000504327.1_1_3:98501668-98501887:+|nuORF	ENST00000504327.1_1_3:98501668-98501887:+|nuORF	ENST00000504327.1_1_3:98501668-98501887:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3412475585938	2	560.338987	1118.66342	3.1454	0.0017625	-0.73406	-0.00041132	2.4113	0.0013512	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.85939	1	13006	13006		23.042	0	1	151040			11226	12901	7863	7871	12805	12805					0.10883532147249753
GIVGVSASRSL	11	Unmodified	_GIVGVSASRSL_					0	0	0		ENST00000504045.5_1_5:138629411-138643017:+|nuORF;ENST00000512876.5_1_5:138629414-138653336:+|nuORF	ENST00000504045.5_1_5:138629411-138643017:+|nuORF	ENST00000504045.5_1_5:138629411-138643017:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.303655	1044.59276	1.1688	0.00061163	-1.3622	-0.00071286	-0.19344	-0.00010123	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.6493	1	9215	9215		38.754	8.25	1	12580000			11227	12897	7864	7872	12806	12806					0.07224530363282611
GIVILDVP	8	Unmodified	_GIVILDVP_					0	0	0			REV__ENST00000377242.7_1_10:20466301-20506418:+|nuORF	REV__ENST00000377242.7_1_10:20466301-20506418:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.26641845703125	2	413.257654	824.500755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.584	1	15.986	15.486	16.486	-0.59873								0	0	0	0.29831	1	151	151		39.021	1.993	1		+		11228	25862	7865	7873	12807	12807					0.08148472016898722
GIVKDASIIHR	11	Unmodified	_GIVKDASIIHR_					0	0	0		nc|ENSG00000105339|A2RUS2-2|DENND3;nc|ENSG00000105339|A2RUS2|DENND3;ENSG00000105339|ENST00000519811|DENND3;ENST00000520482.1_1_8:142168222-142185717:+|nuORF	nc|ENSG00000105339|A2RUS2-2|DENND3	nc|ENSG00000105339|A2RUS2-2|DENND3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8591918945312	2	604.859129	1207.70371	-0.021086	-1.2754E-05	-1.2823	-0.00077563	-1.3034	-0.00078839	604.8585066664384	79.213	1.3596	79.762	78.896	80.256	0.54945					60	31	3	0	0	0	0.6593	1	9097	9097		28.081	0	1	663810			11229	2205	7866	7874	12808	12808					0.10816170071370834
GIVRNHSE	8	Unmodified	_GIVRNHSE_					0	0	0		chr2:73734588-73736617|21|21.95|0.52|5.39|-|1|TE_info:L2,L2_dup6768,L2,LINE,donor,+,73736617,73736795|TPRKB,None|4	chr2:73734588-73736617|21|21.95|0.52|5.39|-|1|TE_info:L2,L2_dup6768,L2,LINE,donor,+,73736617,73736795|TPRKB,None|4	chr2:73734588-73736617|21|21.95|0.52|5.39|-|1|TE_info:L2,L2_dup6768,L2,LINE,donor,+,73736617,73736795|TPRKB,None|4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.60888671875	2	456.238316	910.462078	0.040546	1.8499E-05	4.037	0.0018418	4.0775	0.0018603	456.2410531414096	64.992	0.75647	65.546	64.939	65.695	0.55386					49	18	3	0	0	0	0.4196	1	6976	6976		25.45	0	1	164670			11230	350	7867	7875	12809	12809					0.0032655943509780627
GIVSGAVLH	9	Unmodified	_GIVSGAVLH_					0	0	0			REV__ENST00000427566.2_1_1:248100136-248100640:-|nuORF	REV__ENST00000427566.2_1_1:248100136-248100640:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.29498291015625	2	426.750527	851.486502	0.19828	8.4617E-05	-0.88222	-0.00037649	-0.68394	-0.00029187	426.7497527453665	72.802	1.7635	73.356	71.953	73.716	0.55386					61	42	2	0	0	0	0.2063	1	8047	8047		71.378	16.613	1	143270	+		11231	26565	7868	7876	12810	12810					0.054818195886127796
GIVTPPKVC	9	Unmodified	_GIVTPPKVC_					0	0	0			REV__ENSG00000203733|ENST00000450456|GJE1	REV__ENSG00000203733|ENST00000450456|GJE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2637023925781	2	457.262413	912.510274	0.52869	0.00024175	3.5661	0.0016306	4.0948	0.0018724	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.64922	1	8586	8586		44.117	5.3107	1	4885100	+		11232	23439	7869	7877	12811	12811					0.05051917030766617
GIVTPPKVC	9	Unmodified	_GIVTPPKVC_					0	0	0			REV__ENSG00000203733|ENST00000450456|GJE1	REV__ENSG00000203733|ENST00000450456|GJE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2639465332031	2	457.262413	912.510274	0.43756	0.00020008	3.6399	0.0016644	4.0774	0.0018645	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.76255	1	8126	8126		35.618	6.4687	1	4814400	+		11233	23439	7869	7877	12812	12812					0.05051917030766617
GIYEALEL	8	Unmodified	_GIYEALEL_					0	0	0		ENSG00000074800|ENST00000234590|ENO1;ENST00000492343.1_1_1:8931941-8934967:-|nuORF;ENST00000537838.5_1_12:7024996-7025840:+|nuORF;ENST00000486051.5_1_1:8930279-8934967:-|nuORF;ENST00000539713.5_1_12:7024996-7026336:+|nuORF;ENST00000519834.5_1_17:4855124-4857242:+|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000111674|P09104-2|ENO2;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000108515|P13929-2|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENSG00000108515|ENST00000519602|ENO3	ENSG00000074800|ENST00000234590|ENO1	ENSG00000074800|ENST00000234590|ENO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	454.24261474609375	2	454.242201	906.469849	-1.2476	-0.00056673	1.4252	0.00064741	0.1776	8.0674E-05	454.24278433345404	83.268	0.765	83.268	82.933	83.698	0					27	19	2	0	0	0	0.67263	2	7790	7790;7800		68.485	8.1907	1	150500			11234	1314	7870	7878	12813;12814	12813					0.012872739119870857
GIYEALEL	8	Unmodified	_GIYEALEL_					0	0	0		ENSG00000074800|ENST00000234590|ENO1;ENST00000492343.1_1_1:8931941-8934967:-|nuORF;ENST00000537838.5_1_12:7024996-7025840:+|nuORF;ENST00000486051.5_1_1:8930279-8934967:-|nuORF;ENST00000539713.5_1_12:7024996-7026336:+|nuORF;ENST00000519834.5_1_17:4855124-4857242:+|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000111674|P09104-2|ENO2;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000108515|P13929-2|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENSG00000108515|ENST00000519602|ENO3	ENSG00000074800|ENST00000234590|ENO1	ENSG00000074800|ENST00000234590|ENO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.2419738769531	2	454.242201	906.469849	-0.13611	-6.1827E-05	0.36885	0.00016755	0.23274	0.00010572	454.2422343635793	83.137	1.2007	83.204	82.829	84.03	0.066727					41	27	2	0	0	0	0.73851	1	8239	8239		65.803	5.5092	1	327010			11235	1314	7870	7878	12815	12815					0.012872739119870857
GIYEALEL	8	Unmodified	_GIYEALEL_					0	0	0		ENSG00000074800|ENST00000234590|ENO1;ENST00000492343.1_1_1:8931941-8934967:-|nuORF;ENST00000537838.5_1_12:7024996-7025840:+|nuORF;ENST00000486051.5_1_1:8930279-8934967:-|nuORF;ENST00000539713.5_1_12:7024996-7026336:+|nuORF;ENST00000519834.5_1_17:4855124-4857242:+|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000111674|P09104-2|ENO2;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000108515|P13929-2|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENSG00000108515|ENST00000519602|ENO3	ENSG00000074800|ENST00000234590|ENO1	ENSG00000074800|ENST00000234590|ENO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.2408752441406	2	454.242201	906.469849	0.58822	0.00026719	-0.30957	-0.00014062	0.27864	0.00012657	454.24194486416434	83.253	0.79051	83.187	82.887	83.677	-0.066185					31	18	2	0	0	0	0.92457	1	8453	8453		47.916	5.4411	1	353910			11236	1314	7870	7878	12816	12816					0.012872739119870857
GIYEALEL	8	Unmodified	_GIYEALEL_					0	0	0		ENSG00000074800|ENST00000234590|ENO1;ENST00000492343.1_1_1:8931941-8934967:-|nuORF;ENST00000537838.5_1_12:7024996-7025840:+|nuORF;ENST00000486051.5_1_1:8930279-8934967:-|nuORF;ENST00000539713.5_1_12:7024996-7026336:+|nuORF;ENST00000519834.5_1_17:4855124-4857242:+|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000111674|P09104-2|ENO2;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000108515|P13929-2|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENSG00000108515|ENST00000519602|ENO3	ENSG00000074800|ENST00000234590|ENO1	ENSG00000074800|ENST00000234590|ENO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.2415466308594	2	454.242201	906.469849	0.66034	0.00029996	-0.77657	-0.00035275	-0.11623	-5.2796E-05	454.2418835385992	83.038	0.85704	83.097	82.816	83.673	0.059158					36	19	3	0	0	0	0.73851	1	8319	8319		65.803	5.5092	1	299190			11237	1314	7870	7878	12817	12817					0.012872739119870857
GIYEALEL	8	Unmodified	_GIYEALEL_					0	0	0		ENSG00000074800|ENST00000234590|ENO1;ENST00000492343.1_1_1:8931941-8934967:-|nuORF;ENST00000537838.5_1_12:7024996-7025840:+|nuORF;ENST00000486051.5_1_1:8930279-8934967:-|nuORF;ENST00000539713.5_1_12:7024996-7026336:+|nuORF;ENST00000519834.5_1_17:4855124-4857242:+|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000111674|P09104-2|ENO2;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000108515|P13929-2|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENSG00000108515|ENST00000519602|ENO3	ENSG00000074800|ENST00000234590|ENO1	ENSG00000074800|ENST00000234590|ENO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	454.24212646484375	2	454.242201	906.469849	0.59788	0.00027158	-0.75801	-0.00034432	-0.16013	-7.2738E-05	454.24185023807564	83.009	0.7692	83.156	82.756	83.525	0.14694					34	17	3	0	0	0	0.84634	1	8027	8027		60.294	0	1	231200			11238	1314	7870	7878	12818	12818					0.012872739119870857
GIYPPGSPGK	10	Unmodified	_GIYPPGSPGK_					0	0	0		ENST00000478558.1_1_1:153631742-153633774:+|nuORF;ENSG00000143553|ENST00000368685|SNAPIN	ENST00000478558.1_1_1:153631742-153633774:+|nuORF	ENST00000478558.1_1_1:153631742-153633774:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.7611389160156	2	486.761092	971.507631	0.0078128	3.803E-06	-0.013173	-6.4119E-06	-0.0053597	-2.6089E-06	486.76094746193235	37.226	3.175	37.539	36.88	40.055	0.31312					217	77	4	0	0	0	0.2575	4	3022	2984;2996;3009;3022		77.318	23.966	1	1950900			11239	4644	7871	7879	12819;12820;12821;12822	12822					0.020737848974818007
GIYPPGSPGK	10	Unmodified	_GIYPPGSPGK_					0	0	0		ENST00000478558.1_1_1:153631742-153633774:+|nuORF;ENSG00000143553|ENST00000368685|SNAPIN	ENST00000478558.1_1_1:153631742-153633774:+|nuORF	ENST00000478558.1_1_1:153631742-153633774:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.7610168457031	2	486.761092	971.507631	0.20856	0.00010152	-0.23756	-0.00011563	-0.029002	-1.4117E-05	486.76086709151963	37.199	3.1666	37.684	37.119	40.285	0.48581					216	76	4	0	0	0	0.35939	4	3001	2977;3001;3015;3026		67.494	14.142	1	2150800			11240	4644	7871	7879	12823;12824;12825;12826	12824					0.020737848974818007
GKAAWVGK	8	Unmodified	_GKAAWVGK_					0	0	0		ENST00000587743.1_1_17:74553872-74553974:+|nuORF	ENST00000587743.1_1_17:74553872-74553974:+|nuORF	ENST00000587743.1_1_17:74553872-74553974:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.7393798828125	2	408.739963	815.465373	-1.9297	-0.00078873	1.2966	0.00052999	-0.63302	-0.00025874	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.79929	2	2158	2158;2169		25.45	3.7478	1	521170			11241	14196	7872	7880	12827;12828	12827					0.05025854279756459
GKAAWVGK	8	Unmodified	_GKAAWVGK_					0	0	0		ENST00000587743.1_1_17:74553872-74553974:+|nuORF	ENST00000587743.1_1_17:74553872-74553974:+|nuORF	ENST00000587743.1_1_17:74553872-74553974:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.739501953125	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.89962	1	1856	1856		38.806	10.552	1	1364200			11242	14196	7872	7880	12829	12829					0.05025854279756459
GKAAWVGK	8	Unmodified	_GKAAWVGK_					0	0	0		ENST00000587743.1_1_17:74553872-74553974:+|nuORF	ENST00000587743.1_1_17:74553872-74553974:+|nuORF	ENST00000587743.1_1_17:74553872-74553974:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.7392883300781	2	408.739963	815.465373	-1.9018	-0.00077735	0.37754	0.00015431	-1.5243	-0.00062304	408.7399335619607	40.321	2.4201	40.328	40.071	42.491	0.0065002					190	75	4	0	0	0	0.87922	1	2529	2529		31.955	2.1133	1	4300600			11243	14196	7872	7880	12830	12830					0.05025854279756459
GKAAWVGK	8	Unmodified	_GKAAWVGK_					0	0	0		ENST00000587743.1_1_17:74553872-74553974:+|nuORF	ENST00000587743.1_1_17:74553872-74553974:+|nuORF	ENST00000587743.1_1_17:74553872-74553974:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.7398376464844	2	408.739963	815.465373	1.5082	0.00061648	-2.0092	-0.00082126	-0.50101	-0.00020478	408.739095634202	34.891	2.006	35.101	34.812	36.818	0.21003					151	50	4	0	0	0	0.91977	1	2709	2709		45.952	5.3793	1	5089300			11244	14196	7872	7880	12831	12831					0.05025854279756459
GKAFLRNQR	9	Unmodified	_GKAFLRNQR_					0	0	0			REV__ENST00000367976.3_1_6:132269530-132269650:-|nuORF	REV__ENST00000367976.3_1_6:132269530-132269650:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.3325805664062	2	545.317432	1088.62031	1.2595	0.00068683	-2.1553	-0.0011753	-0.8958	-0.0004885	545.3159624385637	97.886	1.5867	97.934	97.001	98.588	0.048164					60	36	2	0	0	0	0.20789	1	10475	10475		10.265	3.0719	1	97455	+		11245	25583	7873	7881	12832	12832					0.07954478414171717
GKAFLRNQR	9	Unmodified	_GKAFLRNQR_					0	0	0			REV__ENST00000367976.3_1_6:132269530-132269650:-|nuORF	REV__ENST00000367976.3_1_6:132269530-132269650:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	545.317432	1088.62031	3.0467	0.0016614	-4.1678	-0.0022728	-1.1211	-0.00061136	545.3150592718243	97.922	1.0586	97.866	97.23	98.288	-0.055542	-0.0038333	-0.0019998	NaN	10.265	39	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112580	+		11246	25583	7873	7881							0.07954478414171717
GKAFLRNQR	9	Unmodified	_GKAFLRNQR_					0	0	0			REV__ENST00000367976.3_1_6:132269530-132269650:-|nuORF	REV__ENST00000367976.3_1_6:132269530-132269650:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	545.317432	1088.62031	-1.4675	-0.00080023	0.43024	0.00023462	-1.0372	-0.00056562	545.3175896182777	97.566	1.2425	97.768	97.096	98.338	0.20207	-0.1021	0.0030149	NaN	10.265	44	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71419	+		11247	25583	7873	7881							0.07954478414171717
GKAIPHPR	8	Unmodified	_GKAIPHPR_					0	0	0		ENSG00000087502|ENST00000360150|ERGIC2	ENSG00000087502|ENST00000360150|ERGIC2	ENSG00000087502|ENST00000360150|ERGIC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2643737792969	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.80706	1	3022	3022		19.36	2.8868	1	3384400			11248	1579	7874	7882	12833	12833					0.07144347919654592
GKAKKPLK	8	Unmodified	_GKAKKPLK_					0	0	0			REV__ENSG00000158417|ENST00000289371|EIF5B	REV__ENSG00000158417|ENST00000289371|EIF5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002014160156	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82419	1	8392	8392		13.775	0	1	5485100	+		11249	20604	7875	7883	12834	12834					0.14627262273370434
GKAPLHRP	8	Unmodified	_GKAPLHRP_					0	0	0		ENST00000339570.9_1_12:125262560-125262674:-|nuORF	ENST00000339570.9_1_12:125262560-125262674:-|nuORF	ENST00000339570.9_1_12:125262560-125262674:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.263916015625	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.85277	1	2874	2874		25.45	1.2474	1	22029000			11250	10225	7876	7884	12835	12835					0.07144347919654592
GKASEVVLRIH	11	Unmodified	_GKASEVVLRIH_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.5748596191406	3	403.575178	1207.70371	2.802	0.0011308	-3.6279	-0.0014641	-0.82598	-0.00033334	403.5736497882377	83.618	2.5639	83.677	83.026	85.59	0.059258					112	58	3	0	0	0	0.69687	1	8385	8385		32.034	3.9526	1	261970			11251	6721	7877	7885	12836	12836					0.10816170071370834
GKASEVVLRIH	11	Unmodified	_GKASEVVLRIH_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5747375488281	3	403.575178	1207.70371	0.56211	0.00022685	-1.4705	-0.00059345	-0.90837	-0.00036659	403.57452270455985	81.745	1.4637	81.891	80.868	82.331	0.14551					81	33	4	0	0	0	0.69687	1	7764	7764		32.034	0.39986	1	2051300			11252	6721	7877	7885	12837	12837					0.10816170071370834
GKASEVVLRIH	11	Unmodified	_GKASEVVLRIH_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5741271972656	3	403.575178	1207.70371	-0.098768	-3.986E-05	-1.4245	-0.00057487	-1.5232	-0.00061473	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.51578	1	9467	9467		50.791	7.1405	1	16485000			11253	6721	7877	7885	12838	12838					0.10816170071370834
GKCIPVMK	8	Unmodified	_GKCIPVMK_					0	0	0		ENST00000295190.8_1_2:230924004-230933525:-|nuORF	ENST00000295190.8_1_2:230924004-230933525:-|nuORF	ENST00000295190.8_1_2:230924004-230933525:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2476501464844	2	438.245709	874.476865	-0.67664	-0.00029654	-1.485	-0.0006508	-2.1616	-0.00094733	438.24464534340893	34.961	0.48121	34.905	34.768	35.25	-0.056381					20	11	2	0	0	0	0.87922	1	2250	2250		31.955	3.7006	1	28993			11254	9716	7878	7886	12839	12839					0.03460591987220596
GKDGKYKSVYV	11	Unmodified	_GKDGKYKSVYV_					0	0	0		nc|ENSG00000102531|Q9Y2H6-2|FNDC3A;ENSG00000102531|ENST00000492622|FNDC3A	nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.336181640625	2	622.337695	1242.66084	-0.27733	-0.0001726	-1.9307	-0.0012016	-2.208	-0.0013741	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.74763	1	12080	12080		22.58	2.5829	1	419280			11255	2007	7879	7887	12840	12840					0.0492135522326862
GKDNTITIKN	10	Unmodified	_GKDNTITIKN_					0	0	0			REV__ENSG00000173110|ENST00000309758|HSPA6	REV__ENSG00000173110|ENST00000309758|HSPA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.30615234375	2	552.306395	1102.59824	-0.70613	-0.00039	0.73262	0.00040463	0.026487	1.4629E-05	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.54701	1	9592	9592		52.937	10.541	1	1609500	+		11256	21889	7880	7888	12841	12841					0.05104209155092576
GKDNTITIKN	10	Unmodified	_GKDNTITIKN_					0	0	0			REV__ENSG00000173110|ENST00000309758|HSPA6	REV__ENSG00000173110|ENST00000309758|HSPA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.30615234375	2	552.306395	1102.59824	2.2801	0.0012593	-2.1564	-0.001191	0.1237	6.8322E-05	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.86587	1	9763	9763		29.17	0.020503	1	1797400	+		11257	21889	7880	7888	12842	12842					0.05104209155092576
GKDNTITIKN	10	Unmodified	_GKDNTITIKN_					0	0	0			REV__ENSG00000173110|ENST00000309758|HSPA6	REV__ENSG00000173110|ENST00000309758|HSPA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3059692382812	2	552.306395	1102.59824	1.2817	0.0007079	-1.3256	-0.00073213	-0.043866	-2.4228E-05	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.76096	1	9678	9678		41.427	7.2541	1	1712700	+		11258	21889	7880	7888	12843	12843					0.05104209155092576
GKDNTITIKN	10	Unmodified	_GKDNTITIKN_					0	0	0			REV__ENSG00000173110|ENST00000309758|HSPA6	REV__ENSG00000173110|ENST00000309758|HSPA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3056640625	2	552.306395	1102.59824	0.78014	0.00043088	-0.74693	-0.00041253	0.033219	1.8347E-05	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.86106	1	9431	9431		33.922	2.3918	1	1841700	+		11259	21889	7880	7888	12844	12844					0.05104209155092576
GKDVLHGVF	9	Unmodified	_GKDVLHGVF_					0	0	0		nc|ENSG00000137757|P51878-4|CASP5;nc|ENSG00000137757|P51878-6|CASP5;nc|ENSG00000137757|P51878-2|CASP5;ENSG00000137757|ENST00000260315|CASP5;nc|ENSG00000137757|P51878-5|CASP5	nc|ENSG00000137757|P51878-4|CASP5	nc|ENSG00000137757|P51878-4|CASP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.2669982910156	2	486.269084	970.523616	-0.72647	-0.00035326	-3.2279	-0.0015696	-3.9543	-0.0019229	486.2674012957117	86.085	5.1254	86.27	85.016	90.141	0.18522					327	120	4	0	0	0	0.62081	1	8471	8471		45.952	1.8352	1	1830000			11260	14945	7881	7889	12845	12845					0.03717491134386819
GKEKKEKKT	9	Unmodified	_GKEKKEKKT_					0	0	0			REV__ENST00000473629.6_1_11:124492979-124496722:+|nuORF	REV__ENST00000473629.6_1_11:124492979-124496722:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.83642578125	2	538.327131	1074.63971	1.8092	0.00097396	-0.76172	-0.00041006	1.0475	0.0005639	538.8286766737679	116.67	0.12024	116.66	116.58	116.7	-0.014999					8	5	2	0	0	0	0.7932	1	13990	13990		24.519	0.99649	1	28689	+		11261	20370	7882	7890	12846	12846					0.10537389914406958
GKELSTTK	8	Unmodified	_GKELSTTK_					0	0	0			REV__ENST00000263464.7_1_11:102195180-102195213:+|nuORF	REV__ENST00000263464.7_1_11:102195180-102195213:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2469482421875	2	432.245275	862.475997	1.4323	0.0006191	2.5127	0.0010861	3.945	0.0017052	432.2464138290426	97.895	1.475	98.281	97.765	99.24	0.38548					115	35	5	0	0	0	0.92394	1	11783	11783		47.657	10.629	1	6652700	+		11262	24450	7883	7891	12847	12847					0.039257921435250864
GKESKILT	8	Unmodified	_GKESKILT_					0	0	0			REV__nc|ENSG00000163629|Q12923-2|PTPN13	REV__nc|ENSG00000163629|Q12923-2|PTPN13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.262939453125	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.8621	1	2937	2937		26.693	2.1737	1	22029000	+		11263	20947	7884	7892	12848	12848					0.07010669040232642
GKGAGGGG	8	Unmodified	_GKGAGGGG_					0	0	0			REV__nc|ENSG00000130675|P50219-2|MNX1;REV__ENSG00000188573|ENST00000338333|FBLL1	REV__ENSG00000188573|ENST00000338333|FBLL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3403930664062	1	560.2787	559.271424	3.1451	0.0017621	-2.5884	-0.0014502	0.55662	0.00031186	560.2752259195684	103.3	0.16699	103.26	103.16	103.33	-0.044563					5	3	2	0	0	0	0.4196	1	11307	11307		18.324	0	1	38137	+		11264	23013;18889	7885	7893	12849	12849					-0.02584102156345125
GKGALVTLAK	10	Unmodified	_GKGALVTLAK_					0	0	0		ENST00000467666.2_1_1:85961913-86042365:-|nuORF;ENST00000535924.6_1_1:85961913-86043684:-|nuORF	ENST00000467666.2_1_1:85961913-86042365:-|nuORF	ENST00000467666.2_1_1:85961913-86042365:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3102111816406	2	479.30821	956.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.434	1	50.484	49.984	50.984	0.049896								0	0	0	0.45132	1	3965	3965		32.812	4.9302	1				11265	12161	7886	7894	12850	12850					0.12182923719592509
GKGFLRTRSK	10	Unmodified	_GKGFLRTRSK_					0	0	0			REV__ENST00000572919.1_3_17:3488830-3495572:-|nuORF	REV__ENST00000572919.1_3_17:3488830-3495572:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.34521484375	2	575.346189	1148.67783	1.1925	0.00068607	-1.8408	-0.0010591	-0.64836	-0.00037303	575.3450411705345	98.393	1.0962	98.77	98.327	99.423	0.37678					95	26	5	0	0	0	0.86802	1	11943	11943		27.047	2.5281	1	3337700	+		11266	23162	7887	7895	12851	12851					0.10943320619753649
GKGFQMLH	8	Oxidation (M)	_GKGFQM(Oxidation (M))LH_		GKGFQM(1)LH		GKGFQM(47)LH	0	0	1			REV__ENSG00000170485|ENST00000335681|NPAS2	REV__ENSG00000170485|ENST00000335681|NPAS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2333984375	2	467.234187	932.453822	-0.26264	-0.00012271	-2.1411	-0.0010004	-2.4037	-0.0011231	467.23346633413524	64.606	2.155	65.159	64.517	66.672	0.55386					169	56	5	0	0	0	0.92176	1	6974	6974		46.766	6.1938	1	8508300	+		11267	21666	7888	7896	12852	12852		323			-0.01510710805882809
GKGGAKEKISA	11	Unmodified	_GKGGAKEKISA_					0	0	0		ENSG00000163541|ENST00000393868|SUCLG1	ENSG00000163541|ENST00000393868|SUCLG1	ENSG00000163541|ENST00000393868|SUCLG1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3037719726562	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.70584	1	8443	8443		30.569	2.4874	1	9288900			11268	5822	7889	7897	12853	12853					0.07224530363305348
GKGGAKEKISA	11	Unmodified	_GKGGAKEKISA_					0	0	0		ENSG00000163541|ENST00000393868|SUCLG1	ENSG00000163541|ENST00000393868|SUCLG1	ENSG00000163541|ENST00000393868|SUCLG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3033447265625	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.61824	1	9424	9424		42.338	6.7198	1	13080000			11269	5822	7889	7897	12854	12854					0.07224530363305348
GKGGAKEKISA	11	Unmodified	_GKGGAKEKISA_					0	0	0		ENSG00000163541|ENST00000393868|SUCLG1	ENSG00000163541|ENST00000393868|SUCLG1	ENSG00000163541|ENST00000393868|SUCLG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3037109375	2	523.303655	1044.59276	-0.1734	-9.0741E-05	-0.15994	-8.3699E-05	-0.33334	-0.00017444	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.69248	1	9080	9080		32.751	0.79567	1	13808000			11270	5822	7889	7897	12855	12855					0.07224530363305348
GKGGGGAPLR	10	Unmodified	_GKGGGGAPLR_					0	0	0		ENSG00000104218|ENST00000678616|CSPP1;nc|ENSG00000104218|Q1MSJ5|CSPP1;nc|ENSG00000104218|Q1MSJ5-2|CSPP1;nc|ENSG00000104218|Q1MSJ5-1|CSPP1	ENSG00000104218|ENST00000678616|CSPP1	ENSG00000104218|ENST00000678616|CSPP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.251708984375	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.86348	1	7575	7575		31.53	1.6883	1	2823900			11271	2119	7890	7898	12856	12856					0.04839453677379879
GKGGPPGRGT	10	Unmodified	_GKGGPPGRGT_					0	0	0		ENST00000565752.5_1_16:28962332-28963698:+|nuORF;ENST00000565919.1_1_16:28962342-28963698:+|nuORF	ENST00000565752.5_1_16:28962332-28963698:+|nuORF	ENST00000565752.5_1_16:28962332-28963698:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.24090576171875	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.70553	1	8214	8214		44.377	3.599	1	1068200			11272	13923	7891	7899	12857	12857					0.021228632976999506
GKGKELTKVF	10	Unmodified	_GKGKELTKVF_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.83056640625	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.8545	2	8924	8924;8936		36.447	4.9169	1	3935500			11273	5146	7892	7900	12858;12859	12858					0.10094577919790026
GKGKELTKVF	10	Unmodified	_GKGKELTKVF_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8306274414062	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.8545	1	9178	9178		36.447	4.9169	1	6402500			11274	5146	7892	7900	12860	12860					0.10094577919790026
GKGKELTKVF	10	Unmodified	_GKGKELTKVF_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8306274414062	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.86272	1	9135	9135		24.519	0	1	6029400			11275	5146	7892	7900	12861	12861					0.10094577919790026
GKGKKARTK	9	Unmodified	_GKGKKARTK_					0	0	0		ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.29302978515625	2	487.3169	972.619247	0.71912	0.00035044	0.3988	0.00019434	1.1179	0.00054478	487.31805232211786	21.233	0.19594	21.217	21.133	21.329	-0.016428					11	8	2	0	0	0	0.20789	1	557	557		16.473	3.514	1	40766			11276	765	7893	7901	12862	12862					0.13184264045275995
GKGKRAVL	8	Unmodified	_GKGKRAVL_					0	0	0			REV__nc|ENSG00000188467|Q71RS6-2|SLC24A5	REV__nc|ENSG00000188467|Q71RS6-2|SLC24A5	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	414.7616271972656	2	414.774337	827.534121	-1.172	-0.00048612	2.3274	0.00096534	1.1554	0.00047922	414.7754750949934	88.651	0.40921	88.651	88.548	88.958	0					12	9	2	0	0	0	0.4196	1	8533	8533		17.365	0	1	81766	+		11277	23003	7894	7902	12863	12863					0.11345518579457803
GKGKRLPE	8	Unmodified	_GKGKRLPE_					0	0	0		ENSG00000146966|ENST00000496613|DENND2A;nc|ENSG00000146966|Q9ULE3-2|DENND2A;ENST00000481894.1_1_1:115138166-115167938:-|nuORF;nc|ENSG00000175984|Q68D51-2|DENND2C;nc|ENSG00000175984|Q68D51-3|DENND2C;ENSG00000175984|ENST00000393274|DENND2C	ENSG00000146966|ENST00000496613|DENND2A;nc|ENSG00000175984|Q68D51-2|DENND2C	ENSG00000146966|ENST00000496613|DENND2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.785888671875	2	442.769252	883.52395	-2.3978	-0.0010617	0.70201	0.00031083	-1.6958	-0.00075084	442.76872701883786	40.526	0.20004	40.918	40.832	41.032	0.39209					6	5	2	0	0	0	0.4196	1	3487	3487		11.511	0	1	185130			11278	4873;7048	7895	7903	12864	12864					0.07752910854219408
GKGKSAKKSP	10	Unmodified	_GKGKSAKKSP_					0	0	0			REV__ENSG00000111652|ENST00000543155|COPS7A	REV__ENSG00000111652|ENST00000543155|COPS7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.30078125	2	494.300916	986.587279	2.3073	0.0011405	-2.72	-0.0013445	-0.41277	-0.00020403	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.69342	1	10571	10571		45.022	5.7694	1	53958000	+		11279	17881	7896	7904	12865	12865					0.09344851571472645
GKGKSAKKSP	10	Unmodified	_GKGKSAKKSP_					0	0	0			REV__ENSG00000111652|ENST00000543155|COPS7A	REV__ENSG00000111652|ENST00000543155|COPS7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3009338378906	2	494.300916	986.587279	-0.67103	-0.00033169	0.2629	0.00012995	-0.40813	-0.00020174	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.86106	1	10445	10445		33.922	1.1092	1	54981000	+		11280	17881	7896	7904	12866	12866					0.09344851571472645
GKGKSAKKSP	10	Unmodified	_GKGKSAKKSP_					0	0	0			REV__ENSG00000111652|ENST00000543155|COPS7A	REV__ENSG00000111652|ENST00000543155|COPS7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.30084228515625	2	494.300916	986.587279	-1.6335	-0.00080746	1.1761	0.00058136	-0.4574	-0.0002261	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.47072	1	10094	10094		58.246	17.468	1	46933000	+		11281	17881	7896	7904	12867	12867					0.09344851571472645
GKGKVFCL	8	Unmodified	_GKGKVFCL_					0	0	0		ENST00000442921.6_3_12:15699295-15699334:+|nuORF	ENST00000442921.6_3_12:15699295-15699334:+|nuORF	ENST00000442921.6_3_12:15699295-15699334:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2461853027344	2	426.244024	850.473494	0.55579	0.0002369	4.2122	0.0017954	4.768	0.0020323	426.24575751127946	87.37	3.4516	87.816	85.746	89.198	0.44628					161	83	2	0	0	0	0.88915	1	10267	10267		35.201	3.2459	1	2779100			11282	11799	7897	7905	12868	12868					0.04227665204859932
GKGKVGRPT	9	Unmodified	_GKGKVGRPT_					0	0	0		nc|ENSG00000069275|Q9H1E3-2|NUCKS1;ENSG00000069275|ENST00000367142|NUCKS1	nc|ENSG00000069275|Q9H1E3-2|NUCKS1	nc|ENSG00000069275|Q9H1E3-2|NUCKS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2740783691406	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.7932	1	9966	9966		24.519	1.4767	1	51698000			11283	1217	7898	7906	12869	12869					0.08152313228526964
GKGLGVEVRSL	11	Unmodified	_GKGLGVEVRSL_					0	0	0			REV__ENST00000321751.9_1_1:1310503-1310548:-|nuORF	REV__ENST00000321751.9_1_1:1310503-1310548:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.8295288085938	2	557.83258	1113.65061	-0.43888	-0.00024482	-2.64	-0.0014727	-3.0789	-0.0017175	557.8312098012074	101.3	1.4308	101.3	100.82	102.25	0					75	34	3	0	0	0	0.72106	1	10339	10339		28.081	0.19925	1	522930	+		11284	25017	7899	7907	12870	12870					0.09832792288693781
GKGPLAAAF	9	Unmodified	_GKGPLAAAF_					0	0	0		ENSG00000086827|ENST00000200135|ZW10	ENSG00000086827|ENST00000200135|ZW10	ENSG00000086827|ENST00000200135|ZW10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.24591064453125	2	416.239796	830.465038	4.494	0.0018706	2.5862	0.0010765	7.0803	0.0029471	416.2407200514404	106.97	0.27946	107.12	106.9	107.18	0.14928					9	7	2	0	0	0	0.20789	1	13084	13084		12.207	0	1	274160			11285	1561	7900	7908	12871	12871					0.043024345598951186
GKGQRWVV	8	Unmodified	_GKGQRWVV_					0	0	0			REV__nc|ENSG00000149926|Q71RH2-2|TLCD3B	REV__nc|ENSG00000149926|Q71RH2-2|TLCD3B	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.26953125	2	465.269419	928.524284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.936	1	80.936	80.436	81.436	0								0	0	0	0.30316	1	7489	7489		42.474	10.945	1		+		11286	20198	7901	7909	12872	12872					0.05716330574091444
GKGRDQSKN	9	Unmodified	_GKGRDQSKN_					0	0	0		ENST00000492823.1_1_1:203765624-203765819:+|nuORF	ENST00000492823.1_1_1:203765624-203765819:+|nuORF	ENST00000492823.1_1_1:203765624-203765819:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.25994873046875	2	495.259779	988.505006	1.1508	0.00056992	-0.61704	-0.0003056	0.53371	0.00026433	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.73802	1	2715	2715		37.812	0.65241	1	3842700			11287	12708	7902	7910	12873	12873					0.010293294925190821
GKGRLIKW	8	Unmodified	_GKGRLIKW_					0	0	0			REV__nc|ENSG00000151148|Q7Z3V4-2|UBE3B	REV__nc|ENSG00000151148|Q7Z3V4-2|UBE3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3029479980469	2	479.303262	956.59197	-0.34929	-0.00016742	-0.49147	-0.00023556	-0.84077	-0.00040298	479.3029775707549	74.562	0.48936	74.518	74.305	74.795	-0.043877					26	15	2	0	0	0	0.884	1	7325	7325		33.516	4.3455	1	122770	+		11288	20238	7903	7911	12874	12874					0.11193780504902406
GKGRPGWH	8	Unmodified	_GKGRPGWH_					0	0	0		nc|ENSG00000110619|P49589-2|CARS1;nc|ENSG00000110619|P49589|CARS1;ENST00000531387.5_1_11:3022346-3069017:-|nuORF;ENSG00000110619|ENST00000380525|CARS1;ENST00000526890.5_1_11:3039642-3048038:-|nuORF	nc|ENSG00000110619|P49589-2|CARS1	nc|ENSG00000110619|P49589-2|CARS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.73858642578125	2	447.738286	893.462019	1.2694	0.00056835	-1.0339	-0.00046291	0.2355	0.00010544	447.7376770900924	27.789	0.82314	27.534	27.115	27.938	-0.25465					36	18	3	0	0	0	0.91005	1	1658	1658		42.474	1.6963	1	248700			11289	2533	7904	7912	12875	12875					0.01102604225752657
GKGSPRGR	8	Unmodified	_GKGSPRGR_					0	0	0			REV__ENST00000471419.6_1_X:70511819-70517312:+|nuORF	REV__ENST00000471419.6_1_X:70511819-70517312:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7852478027344	2	407.735743	813.456933	1.5377	0.00062696	-3.6064	-0.0014705	-2.0687	-0.0008435	407.73341149486646	33.547	0.21027	33.717	33.61	33.821	0.16971					5	4	2	0	0	0	0.4196	1	2413	2413		32.812	2.9709	1	24199	+		11290	20056	7905	7913	12876	12876					0.04274300363135808
GKGTPKSIR	9	Unmodified	_GKGTPKSIR_					0	0	0			REV__ENST00000608933.5_1_4:89181479-89181599:-|nuORF	REV__ENST00000608933.5_1_4:89181479-89181599:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28753662109375	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.77696	1	10442	10442		31.53	4.8369	1	50843000	+		11291	29403	7906	7914	12877	12877					0.0874858239999412
GKGTPRGH	8	Unmodified	_GKGTPRGH_					0	0	0		nc|ENSG00000146872|Q86UE8-3|TLK2;ENSG00000146872|ENST00000346027|TLK2;nc|ENSG00000146872|Q86UE8|TLK2	nc|ENSG00000146872|Q86UE8-3|TLK2	nc|ENSG00000146872|Q86UE8-3|TLK2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.23260498046875	2	405.222469	808.430384	0.50759	0.00020569	-0.90865	-0.0003682	-0.40105	-0.00016252	405.22195489809997	83.026	1.265	82.96	82.149	83.414	-0.066185					40	29	2	0	0	0	0.4196	1	8334	8334		10.866	0	1	59407			11292	4867	7907	7915	12878	12878					0.01850611471797947
GKGVALITAVF	11	Unmodified	_GKGVALITAVF_					0	0	0		ENST00000447818.2_1_X:79827372-79827747:-|nuORF	ENST00000447818.2_1_X:79827372-79827747:-|nuORF	ENST00000447818.2_1_X:79827372-79827747:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3278198242188	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.72106	1	12592	12592		28.081	2.0181	1	4041000			11293	11851	7908	7916	12879	12879					0.1093947940810267
GKGVIHKDL	9	Unmodified	_GKGVIHKDL_					0	0	0		ENSG00000137275|ENST00000259808|RIPK1	ENSG00000137275|ENST00000259808|RIPK1	ENSG00000137275|ENST00000259808|RIPK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.25640869140625	2	483.790184	965.565815	0.74078	0.00035838	-4.3806	-0.0021193	-3.6398	-0.0017609	483.7897723072915	35.955	0.23289	36.203	36.081	36.314	0.24769					6	5	2	0	0	0	0.20789	1	2791	2791		24.519	0.31644	1	41717			11294	4187	7909	7917	12880	12880					0.08165466542754984
GKGWLKPK	8	Unmodified	_GKGWLKPK_					0	0	0		nc|ENSG00000159788|O14924-5|RGS12;nc|ENSG00000159788|O14924-4|RGS12;ENSG00000159788|ENST00000336727|RGS12;ENST00000502947.1_1_4:3317897-3344786:+|nuORF	nc|ENSG00000159788|O14924-5|RGS12	nc|ENSG00000159788|O14924-5|RGS12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3013916015625	2	457.284537	912.554522	-0.045138	-2.0641E-05	-4.3475	-0.001988	-4.3926	-0.0020087	457.2824230774214	34.105	0.4305	34.101	33.903	34.334	-0.0047417					16	9	2	0	0	0	0.4196	1	2049	2049		12.207	0	1	24435			11295	5548	7910	7918	12881	12881					0.09474689239266354
GKGYVIDGG	9	Unmodified	_GKGYVIDGG_					0	0	0			REV__ENST00000524031.1_1_6:109739377-109752485:-|nuORF	REV__ENST00000524031.1_1_6:109739377-109752485:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.2558288574219	2	433.224342	864.434132	-0.16839	-7.295E-05	1.558	0.00067496	1.3896	0.00060201	433.2258273835976	107.35	0.32453	107.31	107.12	107.45	-0.034409					12	7	3	0	0	0	0.20789	1	11679	11679		30.504	0	1	226840	+		11296	22752	7911	7919	12882	12882					-0.0035076354499778972
GKHEVSFIC	9	Unmodified	_GKHEVSFIC_					0	0	0		ENSG00000196453|ENST00000247930|ZNF777	ENSG00000196453|ENST00000247930|ZNF777	ENSG00000196453|ENST00000247930|ZNF777	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.2381591796875	2	510.252577	1018.4906	0.014982	7.6447E-06	0.755	0.00038524	0.76998	0.00039288	510.2530494132942	36.253	0.27146	36.235	36.105	36.376	-0.018677					7	5	2	0	0	0	0.20789	1	2322	2322		38.806	0	1	15518			11297	8057	7912	7920	12883	12883					-0.017904589799968562
GKHSTLFAK	9	Unmodified	_GKHSTLFAK_					0	0	0			REV__nc|ENSG00000166091|Q96DZ9-4|CMTM5	REV__nc|ENSG00000166091|Q96DZ9-4|CMTM5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.780517578125	2	494.782359	987.550165	-1.0197	-0.00050453	-3.2191	-0.0015927	-4.2388	-0.0020973	494.78063343938777	84.197	2.1372	84.197	83.134	85.271	0					93	51	2	0	0	0	0.69624	1	7963	7963		40.778	8.8233	1	184680	+		11298	21248	7913	7921	12884	12884					0.0558918002569726
GKIEMKKLL	9	Unmodified	_GKIEMKKLL_					0	0	0			REV__nc|ENSG00000183137|Q8IYX8-2|CEP57L1	REV__nc|ENSG00000183137|Q8IYX8-2|CEP57L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.336181640625	2	530.33337	1058.65219	1.0282	0.00054528	3.9099	0.0020735	4.9381	0.0026188	530.3354292157709	16.113	0.30346	15.626	15.436	15.739	-0.48718					9	6	2	0	0	0	0.7932	1	98	98		21.96	3.6355	1	156170	+		11299	22581	7914	7922	12885	12885					0.12520710053127004
GKILKHRH	8	Unmodified	_GKILKHRH_					0	0	0			REV__ENSG00000107854|ENST00000371627|TNKS2	REV__ENSG00000107854|ENST00000371627|TNKS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.8123474121094	2	494.811785	987.609017	-0.073772	-3.6503E-05	2.0253	0.0010022	1.9516	0.00096565	494.81248076616197	108.78	0.78468	108.73	108.35	109.14	-0.049324					63	32	2	0	0	0	0.85277	1	11868	11868		25.45	4.5032	1	858000	+		11300	17678	7915	7923	12886	12886					0.11471701110690447
GKILLWNN	8	Unmodified	_GKILLWNN_					0	0	0		chr2:237088407-237088605|22|12.73|0.0|20.28|+|1|None,COPS8|1	chr2:237088407-237088605|22|12.73|0.0|20.28|+|1|None,COPS8|1	chr2:237088407-237088605|22|12.73|0.0|20.28|+|1|None,COPS8|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2784118652344	2	479.279452	956.544351	-0.93682	-0.000449	-3.4908	-0.001673	-4.4276	-0.002122	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.85277	1	8027	8027		25.45	3.4903	1	2046100			11301	328	7916	7924	12887	12887					0.06434081514032641
GKIQLPRPKM	10	Unmodified	_GKIQLPRPKM_					0	0	0		ENST00000530761.5_1_11:117857521-117870353:+|nuORF;ENSG00000110324|ENST00000227752|IL10RA	ENST00000530761.5_1_11:117857521-117870353:+|nuORF	ENST00000530761.5_1_11:117857521-117870353:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	584.3566284179688	2	584.355168	1166.69578	0.73697	0.00043065	0.7393	0.00043202	1.4763	0.00086267	584.3556286390271	92.429	3.0487	92.654	91.107	94.155	0.22547					201	72	4	0	0	0	0.86718	1	9325	9325		27.882	2.4321	1	730880			11302	2522	7917	7925	12888	12888					0.1191031955024755
GKISGWVKVP	10	Unmodified	_GKISGWVKVP_					0	0	0			REV__ENSG00000142168|ENST00000270142|SOD1	REV__ENSG00000142168|ENST00000270142|SOD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.8218383789062	2	535.821484	1069.62842	-1.2709	-0.00068098	2.6096	0.0013983	1.3387	0.00071729	535.822709520844	52.315	2.4282	52.315	51.056	53.484	0					97	46	3	0	0	0	0.86106	1	4218	4218		33.922	2.3918	1	282960	+		11303	19724	7918	7926	12889	12889					0.09638612610933706
GKKGTKYPLA	10	Unmodified	_GKKGTKYPLA_					0	0	0			REV__nc|ENSG00000128829|Q9P2K8-3|EIF2AK4	REV__nc|ENSG00000128829|Q9P2K8-3|EIF2AK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8168334960938	2	531.818941	1061.62333	0.49482	0.00026316	-4.4068	-0.0023436	-3.912	-0.0020805	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.8651	1	10217	10217		25.574	2.0514	1	1227700	+		11304	18794	7919	7927	12890	12890					0.09498308748334239
GKKIFIMKCSQ	11	Unmodified	_GKKIFIMKCSQ_					0	0	0		ENSG00000172115|ENST00000305786|CYCS	ENSG00000172115|ENST00000305786|CYCS	ENSG00000172115|ENST00000305786|CYCS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.361328125	2	641.854144	1281.69373	7.1265	0.0045742	1.3543	0.00086923	8.4807	0.0054434	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.77421	1	13828	13828		16.717	1.3843	1	98705			11305	6743	7920	7928	12891	12891					0.06415522750126001
GKKKGKSFF	9	Unmodified	_GKKKGKSFF_					0	0	0			REV__ENST00000588720.1_1_17:59465842-59466070:+|nuORF	REV__ENST00000588720.1_1_17:59465842-59466070:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8078002929688	2	513.808377	1025.6022	-1.4174	-0.00072826	2.551	0.0013107	1.1336	0.00058246	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.78536	1	4173	4173		29.15	3.5755	1	1977600	+		11306	29144	7921	7929	12892	12892					0.09042343439477918
GKKKGPNAN	9	Unmodified	_GKKKGPNAN_					0	0	0		ENSG00000149806|ENST00000529639|FAU	ENSG00000149806|ENST00000529639|FAU	ENSG00000149806|ENST00000529639|FAU	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2633972167969	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.76764	1	7668	7668		34.173	6.2903	1	4061400			11307	5051	7922	7930	12893	12893					0.054357228488470355
GKKKRTRKKKR	11	Unmodified	_GKKKRTRKKKR_					0	0	0		ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.991455078125	3	471.991549	1412.95282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.313	1	17.691	17.191	18.191	-0.62141								0	0	0	0.56276	1	375	375		8.7993	2.7983	1				11308	1027	7923	7931	12894	12894					0.262859778185657
GKKKSRPR	8	Unmodified	_GKKKSRPR_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8044128417969	2	478.809242	955.603932	-2.669	-0.0012779	-4.0656	-0.0019466	-6.7346	-0.0032246	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.81897	1	2880	2880		20.947	0.4651	1	370420	+		11309	18464	7924	7932	12895	12895					0.12435397248077606
GKKPMAPA	8	Unmodified	_GKKPMAPA_					0	0	0			REV__ENSG00000164061|ENST00000296452|BSN	REV__ENSG00000164061|ENST00000296452|BSN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2260437011719	2	400.228374	798.442194	-1.9102	-0.00076451	-3.1482	-0.00126	-5.0583	-0.0020245	400.22704294896187	35.523	1.8215	35.554	35.255	37.076	0.031132					88	51	2	0	0	0	0.88915	1	1902	1902		35.201	1.7077	1	333970	+		11310	21019	7925	7933	12896	12896					0.034910921707592024
GKKRKRRPRQR	11	Unmodified	_GKKRKRRPRQR_					0	0	0			REV__ENST00000354992.6_1_22:34316098-34316365:-|nuORF	REV__ENST00000354992.6_1_22:34316098-34316365:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.6542663574219	3	489.318548	1464.93381	-1.9765	-0.00096714	1.6179	0.00079166	-0.35864	-0.00017549	489.3194578450995	16.707	0.39843	16.707	16.493	16.892	0					35	17	3	0	0	0	0.84494	1	147	147		6.3209	3.1096	1	55555	+		11311	25368	7926	7934	12897	12897					0.21994441247511531
GKKRRFAFV	9	Unmodified	_GKKRRFAFV_					0	0	0		ENST00000512222.2_1_4:83050145-83050523:+|nuORF	ENST00000512222.2_1_4:83050145-83050523:+|nuORF	ENST00000512222.2_1_4:83050145-83050523:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.8394165039062	2	554.840542	1107.66653	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.1	1	114.1	113.6	114.6	0.0011978								0	0	0	0.33676	1	13766	13766		18.324	0.8564	1				11312	13033	7927	7935	12898	12898					0.11700543316260337
GKKSGAQK	8	Unmodified	_GKKSGAQK_					0	0	0		ENSG00000248712|ENST00000503566|CCDC153;ENST00000375140.7_1_11:119064239-119066706:-|nuORF	ENSG00000248712|ENST00000503566|CCDC153	ENSG00000248712|ENST00000503566|CCDC153	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.2408447265625	2	402.240327	802.466101	0.45659	0.00018366	1.5498	0.00062341	2.0064	0.00080707	402.24007333271123	16.387	0.18846	16.363	16.271	16.46	-0.024035					14	8	3	0	0	0	0.90983	1	134	134		42.396	6.7778	1	63173			11313	8831	7928	7936	12899	12899					0.05696648928801551
GKKSKHKS	8	Unmodified	_GKKSKHKS_					0	0	0			REV__nc|ENSG00000151320|Q13023-2|AKAP6	REV__nc|ENSG00000151320|Q13023-2|AKAP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2745056152344	2	450.274701	898.534849	-1.7762	-0.00079979	1.8456	0.00083102	0.069358	3.123E-05	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.87071	1	12220	12220		29.17	0.020503	1	2494900	+		11314	20245	7929	7937	12900	12900					0.08152313228515595
GKKSKRRKWLN	11	Unmodified	_GKKSKRRKWLN_					0	0	0		ENST00000379251.7_1_X:23801394-23801481:+|nuORF	ENST00000379251.7_1_X:23801394-23801481:+|nuORF	ENST00000379251.7_1_X:23801394-23801481:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.6238098144531	3	467.624755	1399.85244	-1.7204	-0.00080451	-0.53223	-0.00024888	-2.2526	-0.0010534	467.62444178196154	107.87	0.60316	107.91	107.33	107.93	0.036118					61	14	6	0	0	0	0.75457	1	11478	11478		21.032	0.19508	1	13916000			11315	10885	7930	7938	12901	12901					0.16850320764933713
GKKTKKNKT	9	Unmodified	_GKKTKKNKT_					0	0	0		ENSG00000122033|ENST00000381120|MTIF3	ENSG00000122033|ENST00000381120|MTIF3	ENSG00000122033|ENST00000381120|MTIF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.803466796875	2	516.82984	1031.64513	1.0291	0.00053189	-1.1887	-0.00061438	-0.15961	-8.2494E-05	516.8292225672764	97.015	0.56363	97.406	97.199	97.763	0.39065					20	13	2	0	0	0	0.20789	1	11674	11674		14.137	3.2716	1	147550			11316	3208	7931	7939	12902	12902					0.1305711349689318
GKKTKKNKT	9	Unmodified	_GKKTKKNKT_					0	0	0		ENSG00000122033|ENST00000381120|MTIF3	ENSG00000122033|ENST00000381120|MTIF3	ENSG00000122033|ENST00000381120|MTIF3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	516.82984	1031.64513	-0.046923	-2.4251E-05	-0.70366	-0.00036367	-0.75058	-0.00038792	516.8294501091227	97.471	0.97466	97.528	97.163	98.138	0.056831	0.18112	0.0011235	NaN	14.137	41	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	160810			11317	3208	7931	7939							0.1305711349689318
GKKTKKNKT	9	Unmodified	_GKKTKKNKT_					0	0	0		ENSG00000122033|ENST00000381120|MTIF3	ENSG00000122033|ENST00000381120|MTIF3	ENSG00000122033|ENST00000381120|MTIF3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	516.82984	1031.64513	2.5519	0.0013189	-3.1485	-0.0016272	-0.59662	-0.00030835	516.828133092008	97.348	1.3111	97.292	96.889	98.2	-0.055542	-0.054895	-0.0014037	NaN	14.137	57	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	277820			11318	3208	7931	7939							0.1305711349689318
GKKTKKNKT	9	Unmodified	_GKKTKKNKT_					0	0	0		ENSG00000122033|ENST00000381120|MTIF3	ENSG00000122033|ENST00000381120|MTIF3	ENSG00000122033|ENST00000381120|MTIF3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	516.82984	1031.64513	0.90196	0.00046616	-1.5397	-0.00079577	-0.63776	-0.00032962	516.8290202831025	97.114	1.3629	97.162	96.914	98.276	0.048157	-0.18507	0.00025928	NaN	14.137	48	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	166650			11319	3208	7931	7939							0.1305711349689318
GKKTPVRST	9	Unmodified	_GKKTPVRST_					0	0	0		ENSG00000226792|ENST00000563710|C13orf42	ENSG00000226792|ENST00000563710|C13orf42	ENSG00000226792|ENST00000563710|C13orf42	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.2923889160156	2	487.293091	972.571629	-0.95487	-0.0004653	1.1127	0.0005422	0.1578	7.6897E-05	487.2935206291715	91.355	2.0771	91.355	90.861	92.938	0					114	48	4	0	0	0	0.7932	1	8992	8992		23.042	2.0956	1	1437600			11320	8716	7932	7940	12903	12903					0.08424565054417599
GKLAPIPKPT	10	Unmodified	_GKLAPIPKPT_					0	0	0		nc|nan|Q5SWW7|C10orf55	nc|nan|Q5SWW7|C10orf55	nc|nan|Q5SWW7|C10orf55	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.32696533203125	2	511.32386	1020.63317	2.4721	0.001264	3.8453	0.0019662	6.3174	0.0032303	511.3257127043103	97.291	2.1515	97.235	96.802	98.953	-0.055542					136	49	4	0	0	0	0.8651	1	10468	10468		25.574	2.5316	1	1837000			11321	15369	7933	7941	12904	12904					0.12367496753699925
GKLAVHTR	8	Unmodified	_GKLAVHTR_					0	0	0		ENSG00000204532|ENST00000534327|ZSCAN5C	ENSG00000204532|ENST00000534327|ZSCAN5C	ENSG00000204532|ENST00000534327|ZSCAN5C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.26580810546875	2	441.269419	880.524284	-0.15436	-6.8116E-05	0.042343	1.8685E-05	-0.11202	-4.9431E-05	441.26942556062187	102.44	1.2353	102.46	101.86	103.09	0.01989					43	29	2	0	0	0	0.86677	1	10978	10978		27.882	1.0861	1	355430			11322	8456	7934	7942	12905	12905					0.07924330574076066
GKLAVHTR	8	Unmodified	_GKLAVHTR_					0	0	0		ENSG00000204532|ENST00000534327|ZSCAN5C	ENSG00000204532|ENST00000534327|ZSCAN5C	ENSG00000204532|ENST00000534327|ZSCAN5C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.2685546875	2	441.269419	880.524284	-1.8033	-0.00079573	1.8011	0.00079477	-0.0021734	-9.5905E-07	441.27019106921387	102.19	1.1435	102.32	101.8	102.94	0.13569					42	27	2	0	0	0	0.87479	1	10679	10679		30.504	3.7075	1	779290			11323	8456	7934	7942	12906	12906					0.07924330574076066
GKLCWLGV	8	Unmodified	_GKLCWLGV_					0	0	0		ENST00000492148.5_1_20:39791735-39791819:+|nuORF	ENST00000492148.5_1_20:39791735-39791819:+|nuORF	ENST00000492148.5_1_20:39791735-39791819:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2451477050781	2	438.244024	874.473494	-0.12725	-5.5768E-05	1.8829	0.00082515	1.7556	0.00076938	438.2446981932507	34.9	0.56031	34.888	34.686	35.246	-0.012199					16	14	2	0	0	0	0.9159	1	2131	2131		44.531	5.2782	1	47511			11324	12698	7935	7943	12907	12907					0.031236652048619362
GKLDTRLWVE	10	Unmodified	_GKLDTRLWVE_					0	0	0			REV__nc|ENSG00000175662|Q6ZVM7-3|TOM1L2	REV__nc|ENSG00000175662|Q6ZVM7-3|TOM1L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	608.8369140625	2	608.837862	1215.66117	0.90897	0.00055342	-1.8202	-0.0011082	-0.91123	-0.00055479	608.8366424121912	110.3	0.86794	110.38	110.18	111.05	0.073685					55	25	4	0	0	0	0.8651	1	11852	11852		25.574	1.0549	1	2642000	+		11325	22079	7936	7944	12908	12908					0.06196774943100536
GKLDYTSGH	9	Unmodified	_GKLDYTSGH_					0	0	0		ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.2363586425781	2	489.237981	976.461409	-0.72549	-0.00035494	-2.4583	-0.0012027	-3.1838	-0.0015576	489.23682827265793	62.903	2.2218	63.017	62.721	64.943	0.11388					298	98	5	0	0	0	0.76255	1	5472	5472		35.618	1.4457	1	3506900			11326	5945	7937	7945	12909	12909					-0.02776280004616183
GKLDYTSGH	9	Unmodified	_GKLDYTSGH_					0	0	0		ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.23699951171875	2	489.237981	976.461409	0.45265	0.00022146	-3.6619	-0.0017915	-3.2092	-0.0015701	489.23621768021786	62.918	2.6052	63.04	62.714	65.319	0.12252					281	107	5	0	0	0	0.77696	1	5592	5592		31.53	2.3803	1	3811100			11327	5945	7937	7945	12910	12910					-0.02776280004616183
GKLFRKSF	8	Unmodified	_GKLFRKSF_					0	0	0		nc|ENSG00000023287|Q8TDY2-2|RB1CC1;ENSG00000023287|ENST00000025008|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7982177734375	2	491.795269	981.575986	-2.2672	-0.001115	3.2317	0.0015893	0.96443	0.0004743	491.79705126035327	67.243	0.7262	67.272	67.037	67.763	0.028587					47	29	2	0	0	0	0.87922	1	6434	6434		31.955	6.5047	1	84975			11328	856	7938	7946	12911	12911					0.08446074267999393
GKLGLWRFV	9	Unmodified	_GKLGLWRFV_					0	0	0		nc|ENSG00000100578|Q9BVV6-3|KIAA0586	nc|ENSG00000100578|Q9BVV6-3|KIAA0586	nc|ENSG00000100578|Q9BVV6-3|KIAA0586	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3285522460938	2	538.324194	1074.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.97	1	115.94	115.44	116.44	-0.02433								0	0	0	0.30053	1	12832	12832		30.504	3.7075	1				11329	14815	7939	7947	12912	12912					0.09950336193401199
GKLLKGLIEY	10	Unmodified	_GKLLKGLIEY_					0	0	0			REV__ENSG00000111799|ENST00000322507|COL12A1	REV__ENSG00000111799|ENST00000322507|COL12A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.3340454101562	2	567.350074	1132.6856	0.59359	0.00033677	-0.79167	-0.00044915	-0.19808	-0.00011238	567.3495447700041	53.062	0.45449	53.676	53.49	53.944	0.61436					16	10	2	0	0	0	0.37624	1	5343	5343		18.262	0	1	124160	+		11330	17895	7940	7948	12913	12913					0.12456035096647611
GKMGPSGRAG	10	Oxidation (M)	_GKM(Oxidation (M))GPSGRAG_		GKM(1)GPSGRAG		GKM(57)GPSGRAG	0	0	1		ENSG00000197565|ENST00000334504|COL4A6;nc|ENSG00000197565|Q14031|COL4A6	ENSG00000197565|ENST00000334504|COL4A6	ENSG00000197565|ENST00000334504|COL4A6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.2332458496094	2	467.232176	932.449799	0.48872	0.00022835	2.1523	0.0010056	2.6411	0.001234	467.2330448389886	69.415	1.8077	69.544	68.979	70.786	0.1291					180	87	3	0	0	0	0.4892	1	6270	6270		56.721	7.2795	1	9201900			11331	8176	7941	7949	12914	12914		142			-0.019128002996012583
GKMVVILGAS	10	Unmodified	_GKMVVILGAS_					0	0	0		nc|ENSG00000162692|P19320-2|VCAM1;nc|ENSG00000162692|P19320-3|VCAM1;ENSG00000162692|ENST00000294728|VCAM1	nc|ENSG00000162692|P19320-2|VCAM1	nc|ENSG00000162692|P19320-2|VCAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.790283203125	2	487.788795	973.563038	0.64552	0.00031488	3.0925	0.0015085	3.738	0.0018234	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.86763	1	8058	8058		26.693	3.6504	1	1929300			11332	5718	7942	7950	12915	12915					0.0751987509358969
GKNFCLHCLY	10	Unmodified	_GKNFCLHCLY_					0	0	0			REV__ENST00000372333.3_1_10:81146103-81203947:-|nuORF	REV__ENST00000372333.3_1_10:81146103-81203947:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	599.2810668945312	2	599.280812	1196.54707	-1.091	-0.00065384	2.5869	0.0015503	1.4959	0.00089645	599.2821324751964	41.641	0.81788	41.641	41.328	42.145	0					53	19	4	0	0	0	0.81018	1	2878	2878		38.806	4.8845	1	755210	+		11333	21183	7943	7951	12916	12916					-0.043341544149825495
GKNHVSNVV	9	Unmodified	_GKNHVSNVV_					0	0	0		nc|ENSG00000291074|Q6NUI1|CCDC144NL	nc|ENSG00000291074|Q6NUI1|CCDC144NL	nc|ENSG00000291074|Q6NUI1|CCDC144NL	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	477.2596740722656	2	477.261791	952.509028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.764	1	32.763	32.263	33.263	-0.0016365								0	0	0	0.28889	1	1884	1884		35.152	2.3396	1				11334	15345	7944	7952	12917	12917					0.030874189862288404
GKPAKAFSLN	10	Unmodified	_GKPAKAFSLN_					0	0	0		ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.793212890625	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.8651	1	8683	8683		25.574	2.5316	1	817800			11335	1301	7945	7953	12918	12918					0.06185449197187154
GKPCTVGFC	9	Carbamidomethyl (C)	_GKPC(Carbamidomethyl (C))TVGFC_	GKPC(0.999)TVGFC(0.001)		GKPC(32)TVGFC(-32)		0	1	0		ENSG00000151694|ENST00000310823|ADAM17;nc|ENSG00000151694|P78536-2|ADAM17	ENSG00000151694|ENST00000310823|ADAM17	ENSG00000151694|ENST00000310823|ADAM17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.7178955078125	2	484.720055	967.425558	0.76607	0.00037133	-4.2853	-0.0020772	-3.5193	-0.0017059	484.71784448733064	98.881	4.1852	99.038	95.672	99.857	0.15659					143	97	2	0	0	0	0.55097	1	10264	10264		49.442	10.189	2	472970			11336	5137	7946	7954	12919	12919	66				-0.05945776777480205
GKPDPAPAVLL	11	Unmodified	_GKPDPAPAVLL_					0	0	0		ENST00000440671.2_1_9:82478423-82478885:+|nuORF	ENST00000440671.2_1_9:82478423-82478885:+|nuORF	ENST00000440671.2_1_9:82478423-82478885:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.3185424804688	2	539.318774	1076.623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.432	1	79.375	78.875	79.875	-0.056503								0	0	0	0.56276	1	7950	7950		35.152	2.3396	1				11337	11774	7947	7955	12920	12920					0.08774889028472899
GKPIYGTIPN	10	Unmodified	_GKPIYGTIPN_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|44|1|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|44|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2933959960938	2	530.295299	1058.57605	-0.034361	-1.8221E-05	-3.4792	-0.001845	-3.5136	-0.0018632	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.81117	1	9401	9401		38.754	7.2238	1	1852900	+		11338	15917	7948	7956	12921	12921					0.049100294773325004
GKPKELIPASR	11	Unmodified	_GKPKELIPASR_					0	0	0			REV__ENST00000494757.5_1_17:38375603-38434474:+|nuORF	REV__ENST00000494757.5_1_17:38375603-38434474:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.8555908203125	2	598.361505	1194.70846	-0.10487	-6.275E-05	-3.7081	-0.0022188	-3.8129	-0.0022815	598.3593234657415	94.339	4.754	94.774	93.51	98.264	0.43539					199	117	2	0	0	0	0.638	5	11183	11172;11183;11195;11205;11415		40.058	20.061	1	27641000	+		11339	21734	7949	7957	12922;12923;12924;12925;12926	12923					0.11889054214111638
GKPLAIQF	8	Unmodified	_GKPLAIQF_					0	0	0		nc|ENSG00000185252|Q16587-4|ZNF74;nc|ENSG00000185252|Q16587-2|ZNF74;ENST00000476678.1_1_22:20755529-20761255:+|nuORF;nc|ENSG00000185252|Q16587-3|ZNF74;ENSG00000185252|ENST00000400451|ZNF74;ENST00000403682.7_1_22:20748811-20761255:+|nuORF	nc|ENSG00000185252|Q16587-4|ZNF74	nc|ENSG00000185252|Q16587-4|ZNF74	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26556396484375	2	437.263271	872.511988	2.8534	0.0012477	2.2102	0.00096646	5.0637	0.0022142	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.884	1	1393	1393		33.516	5.2613	1	21873000			11340	7694	7950	7958	12927	12927					0.07063294111026153
GKPLAPRH	8	Unmodified	_GKPLAPRH_					0	0	0			REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2635803222656	2	438.264136	874.51372	-1.9277	-0.00084486	0.24503	0.00010739	-1.6827	-0.00073747	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.81548	2	2348	2280;2348		33.516	10.479	1	3507500	+		11341	28947	7951	7959	12928;12929	12929					0.07144347919643224
GKPLAPRH	8	Unmodified	_GKPLAPRH_					0	0	0			REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26312255859375	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.85277	1	2901	2901		25.45	1.2474	1	3384400	+		11342	28947	7951	7959	12930	12930					0.07144347919643224
GKPLAPRH	8	Unmodified	_GKPLAPRH_					0	0	0			REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.263427734375	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.85277	1	2636	2636		25.45	4.9683	1	3673500	+		11343	28947	7951	7959	12931	12931					0.07144347919643224
GKPLAPRH	8	Unmodified	_GKPLAPRH_					0	0	0			REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2626647949219	2	438.264136	874.51372	0.23628	0.00010355	-2.5171	-0.0011032	-2.2808	-0.00099961	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.80706	3	3181	3122;3168;3181		26.796	2.5934	1	5350400	+		11344	28947	7951	7959	12932;12933;12934	12934					0.07144347919643224
GKPLAPRH	8	Unmodified	_GKPLAPRH_					0	0	0			REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26300048828125	2	438.264136	874.51372	-1.2142	-0.00053214	-0.86056	-0.00037715	-2.0748	-0.00090929	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.884	1	3217	3217		33.516	4.366	1	4828000	+		11345	28947	7951	7959	12935	12935					0.07144347919643224
GKPLAPRH	8	Unmodified	_GKPLAPRH_					0	0	0			REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2632141113281	2	438.264136	874.51372	-0.25936	-0.00011367	-1.4504	-0.00063564	-1.7097	-0.00074931	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.87922	2	2652	2652;2796		33.516	6.7195	1	2361100	+		11346	28947	7951	7959	12936;12937	12936					0.07144347919643224
GKPLAPRH	8	Unmodified	_GKPLAPRH_					0	0	0			REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2628173828125	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.86288	1	3249	3249		26.796	0	1	4268300	+		11347	28947	7951	7959	12938	12938					0.07144347919643224
GKPLAPRH	8	Unmodified	_GKPLAPRH_					0	0	0			REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2622985839844	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.79929	2	2934	2716;2934		33.516	6.7195	1	21381000	+		11348	28947	7951	7959	12939;12940	12940					0.07144347919643224
GKPLAPRH	8	Unmodified	_GKPLAPRH_					0	0	0			REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2633972167969	2	438.264136	874.51372	0.27759	0.00012166	-2.5692	-0.001126	-2.2916	-0.0010043	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.87922	1	2761	2761		31.955	2.8053	1	85249000	+		11349	28947	7951	7959	12941	12941					0.07144347919643224
GKPLAPRH	8	Unmodified	_GKPLAPRH_					0	0	0			REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	REV__ENST00000572418.1_1_17:3807220-3819678:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2631530761719	2	438.264136	874.51372	0.60068	0.00026326	-1.8619	-0.00081599	-1.2612	-0.00055273	438.263210874223	57.843	1.7031	58.396	57.682	59.385	0.55323					87	41	3	0	0	0	0.85277	1	6054	6054		25.45	4.9683	1	1743700	+		11350	28947	7951	7959	12942	12942					0.07144347919643224
GKPLCSGRG	9	Unmodified	_GKPLCSGRG_					0	0	0		ENSG00000082781|ENST00000296181|ITGB5	ENSG00000082781|ENST00000296181|ITGB5	ENSG00000082781|ENST00000296181|ITGB5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2633056640625	2	437.731812	873.449071	0.15829	6.929E-05	2.7294	0.0011947	2.8877	0.001264	437.7347703310129	36.45	0.14358	36.553	36.443	36.586	0.10306					5	4	2	0	0	0	0.20789	1	2005	2005		25.574	3.6142	1	25261			11351	1491	7952	7960	12943	12943					0.007284050513590046
GKPLKCIIKH	10	Unmodified	_GKPLKCIIKH_					0	0	0		ENSG00000100412|ENST00000216254|ACO2	ENSG00000100412|ENST00000216254|ACO2	ENSG00000100412|ENST00000216254|ACO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8540649414062	2	568.852261	1135.68997	0.52259	0.00029728	0.88949	0.00050599	1.4121	0.00080327	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.86218	1	10939	10939		32.812	6.0163	1	84800000			11352	1838	7953	7961	12944	12944					0.1275522103858293
GKPLLIPSR	9	Unmodified	_GKPLLIPSR_					0	0	0			REV__nc|ENSG00000185963|Q8TD16|BICD2	REV__nc|ENSG00000185963|Q8TD16|BICD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.8157653808594	2	490.816202	979.617851	-0.10843	-5.3222E-05	-1.1394	-0.00055921	-1.2478	-0.00061244	490.8155078618727	72.986	0.65971	73.54	73.191	73.851	0.55386					31	16	3	0	0	0	0.7932	1	8206	8206		25.574	0.12388	1	939560	+		11353	22814	7954	7962	12945	12945					0.1272262995652227
GKPMLGAVQ	9	Unmodified	_GKPMLGAVQ_					0	0	0		ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7545471191406	2	450.752213	899.489873	0.36741	0.00016561	4.3918	0.0019796	4.7592	0.0021452	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.76255	1	8238	8238		35.618	2.1027	1	394230			11354	6206	7955	7963	12946	12946					0.0361074637096408
GKPNTRQQLRR	11	Unmodified	_GKPNTRQQLRR_					0	0	0			REV__nc|ENSG00000007923|Q9NVH1-2|DNAJC11	REV__nc|ENSG00000007923|Q9NVH1-2|DNAJC11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9326477050781	3	451.932248	1352.77491	1.2214	0.000552	-0.29405	-0.00013289	0.92737	0.00041911	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.72892	1	10886	10886		26.75	6.4347	1	1043200	+		11355	16126	7956	7964	12947	12947					0.11263682828712263
GKPNTRQQLRR	11	Unmodified	_GKPNTRQQLRR_					0	0	0			REV__nc|ENSG00000007923|Q9NVH1-2|DNAJC11	REV__nc|ENSG00000007923|Q9NVH1-2|DNAJC11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9327087402344	3	451.932248	1352.77491	0.75363	0.00034059	0.20277	9.1639E-05	0.9564	0.00043223	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.78083	1	10502	10502		15.337	0.0043666	1	952120	+		11356	16126	7956	7964	12948	12948					0.11263682828712263
GKPNTRQQLRR	11	Unmodified	_GKPNTRQQLRR_					0	0	0			REV__nc|ENSG00000007923|Q9NVH1-2|DNAJC11	REV__nc|ENSG00000007923|Q9NVH1-2|DNAJC11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.93292236328125	3	451.932248	1352.77491	-1.7713	-0.0008005	2.7699	0.0012518	0.99861	0.0004513	451.93340802352935	100.57	2.3737	100.74	99.884	102.26	0.17199					164	56	4	0	0	0	0.72892	1	10436	10436		26.75	5.9126	1	618930	+		11357	16126	7956	7964	12949	12949					0.11263682828712263
GKPPHPIPA	9	Unmodified	_GKPPHPIPA_					0	0	0		nc|ENSG00000185813|Q99447-3|PCYT2	nc|ENSG00000185813|Q99447-3|PCYT2	nc|ENSG00000185813|Q99447-3|PCYT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2635192871094	2	457.266345	912.518136	-1.2803	-0.00058543	-2.9682	-0.0013572	-4.2485	-0.0019427	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.76996	1	7322	7322		33.516	1.5607	1	812040			11358	15156	7957	7965	12950	12950					0.05837812342554116
GKPPTPPPKI	10	Unmodified	_GKPPTPPPKI_					0	0	0		nc|ENSG00000241839|Q8TD55-2|PLEKHO2;ENSG00000241839|ENST00000323544|PLEKHO2	nc|ENSG00000241839|Q8TD55-2|PLEKHO2	nc|ENSG00000241839|Q8TD55-2|PLEKHO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.31298828125	2	516.316035	1030.61752	-0.2553	-0.00013181	-3.2452	-0.0016755	-3.5005	-0.0018073	516.3144185010789	103.22	1.1465	103.4	103.01	104.15	0.18298					74	28	3	0	0	0	0.8651	1	10972	10972		25.574	2.5316	1	978380			11359	8795	7958	7966	12951	12951					0.10343210236646883
GKPRLPKA	8	Unmodified	_GKPRLPKA_					0	0	0		ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.779296875	2	433.782162	865.549771	-1.737	-0.0007535	-2.0627	-0.00089475	-3.7997	-0.0016482	433.781982682946	49.839	1.6262	49.839	49.188	50.814	0					188	38	6	0	0	0	0.4196	1	3871	3871		12.207	0	1	2693800			11360	3698	7959	7967	12952	12952					0.11161805096492117
GKPSEKRSL	9	Unmodified	_GKPSEKRSL_					0	0	0			REV__nc|ENSG00000198363|Q12797-4|ASPH	REV__nc|ENSG00000198363|Q12797-4|ASPH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2908020019531	2	501.290548	1000.56654	-0.86867	-0.00043546	0.96116	0.00048182	0.092492	4.6365E-05	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.78528	1	9765	9765		29.17	1.2878	1	2445400	+		11361	30146	7960	7968	12953	12953					0.06628261191792717
GKPSPKAAS	9	Unmodified	_GKPSPKAAS_					0	0	0		nc|ENSG00000258436|Q7Z5J4-2|RAI1;ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.73876953125	2	421.74016	841.465767	2.0413	0.0008609	2.0323	0.00085709	4.0736	0.001718	421.74101918086046	73.852	0.63034	73.896	73.702	74.332	0.043648					46	28	2	0	0	0	0.69624	1	7127	7127		40.778	1.972	1	150240			11362	2417	7961	7969	12954	12954					0.03869229208942215
GKPVKLLK	8	Unmodified	_GKPVKLLK_					0	0	0			REV__ENSG00000083799|ENST00000427738|CYLD	REV__ENSG00000083799|ENST00000427738|CYLD	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.808349609375	2	441.810388	881.606223	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.426	1	18.796	18.296	19.296	-0.6296								0	0	0	0.29631	1	519	519		25.45	4.9683	1		+		11363	16861	7962	7970	12955	12955					0.1606843293318434
GKPVTQLPPDL	11	Unmodified	_GKPVTQLPPDL_					0	0	0			REV__ENSG00000055609|ENST00000262189|KMT2C	REV__ENSG00000055609|ENST00000262189|KMT2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8319702148438	2	582.834788	1163.65502	0.11318	6.5963E-05	-3.7555	-0.0021889	-3.6424	-0.0021229	582.8325626554922	94.252	3.4585	94.298	93.323	96.781	0.046173					208	81	3	0	0	0	0.7434	1	9913	9913		23.523	0	1	743970	+		11364	16413	7963	7971	12956	12956					0.07974256711599992
GKQGVPVGTGK	11	Unmodified	_GKQGVPVGTGK_					0	0	0			REV__nc|ENSG00000182667|Q9P121-3|NTM	REV__nc|ENSG00000182667|Q9P121-3|NTM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.2981567382812	2	514.298373	1026.58219	2.4088	0.0012388	-3.0087	-0.0015473	-0.59985	-0.0003085	514.2969979769872	96.495	1.923	96.438	95.348	97.271	-0.056389					101	44	3	0	0	0	0.69248	1	10363	10363		32.751	9.2278	1	635860	+		11365	22540	7964	7972	12957	12957					0.0699654770885445
GKQTLLLGFV	10	Unmodified	_GKQTLLLGFV_					0	0	0			REV__ENSG00000164761|ENST00000297350|TNFRSF11B	REV__ENSG00000164761|ENST00000297350|TNFRSF11B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3264770507812	2	538.329142	1074.64373	0.070633	3.8024E-05	-4.4231	-0.0023811	-4.3525	-0.0023431	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.8608	1	10603	10603		34.173	2.2177	1	109840000	+		11366	21113	7965	7973	12958	12958					0.10939479408125408
GKRKAGKH	8	Unmodified	_GKRKAGKH_					0	0	0			REV__nc|ENSG00000143847|O75335-2|PPFIA4	REV__nc|ENSG00000143847|O75335-2|PPFIA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.269287109375	2	441.275035	880.535518	-1.4884	-0.00065678	-2.7457	-0.0012116	-4.2341	-0.0018684	441.2737146456143	56.083	0.69081	56.147	55.599	56.29	0.06411					50	31	2	0	0	0	0.86906	1	4700	4700		8.2313	3.915	1	178550	+		11367	19847	7966	7974	12959	12959					0.09047152668222225
GKRKAGKH	8	Unmodified	_GKRKAGKH_					0	0	0			REV__nc|ENSG00000143847|O75335-2|PPFIA4	REV__nc|ENSG00000143847|O75335-2|PPFIA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.2727966308594	2	441.275035	880.535518	-0.33925	-0.0001497	-3.9746	-0.0017539	-4.3139	-0.0019036	441.27318175499244	53.147	0.99224	53.561	53.044	54.036	0.4139					41	23	2	0	0	0	0.83058	2	5345	5345;5358		12.959	2.7744	1	1087400	+		11368	19847	7966	7974	12960;12961	12960					0.09047152668222225
GKRKAGKH	8	Unmodified	_GKRKAGKH_					0	0	0			REV__nc|ENSG00000143847|O75335-2|PPFIA4	REV__nc|ENSG00000143847|O75335-2|PPFIA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.2730407714844	2	441.275035	880.535518	0.022734	1.0032E-05	-4.2612	-0.0018803	-4.2384	-0.0018703	441.27304767072025	52.937	0.86954	53.551	53.075	53.944	0.61436					37	20	2	0	0	0	0.86294	1	5346	5346		8.8223	0.59103	1	1126100	+		11369	19847	7966	7974	12962	12962					0.09047152668222225
GKRLPRALQQ	10	Unmodified	_GKRLPRALQQ_					0	0	0		ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.8585815429688	2	583.859464	1165.70437	-0.80585	-0.00047051	-0.15748	-9.1945E-05	-0.96333	-0.00056245	583.8591949944405	98.804	2.4153	98.854	98.351	100.77	0.049828					137	55	4	0	0	0	0.86763	1	10433	10433		26.693	3.1702	1	1986800			11370	1156	7967	7975	12963	12963					0.1281500951106409
GKRVGGRPLIQ	11	Unmodified	_GKRVGGRPLIQ_					0	0	0		nc|ENSG00000176358|Q86UU9|TAC4;nc|ENSG00000176358|Q86UU9-3|TAC4;ENSG00000176358|ENST00000436235|TAC4	nc|ENSG00000176358|Q86UU9|TAC4	nc|ENSG00000176358|Q86UU9|TAC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8671264648438	2	590.867289	1179.72002	-0.64255	-0.00037966	-1.0172	-0.00060105	-1.6598	-0.00098071	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.69995	1	11292	11292		31.53	2.3803	1	52912000			11371	15112	7968	7976	12964	12964					0.13735296028130506
GKRVHASA	8	Unmodified	_GKRVHASA_					0	0	0			REV__MSTB1_dup2996|chr10:87245512-87245766:-|1.5134867153175602|0.377805891187829|2.0|62.0|15|2|anti-sense	REV__MSTB1_dup2996|chr10:87245512-87245766:-|1.5134867153175602|0.377805891187829|2.0|62.0|15|2|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2367858886719	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.85277	1	7343	7343		25.45	1.2474	1	2127000	+		11372	29662	7969	7977	12965	12965					0.04243184505889985
GKRVHASA	8	Unmodified	_GKRVHASA_					0	0	0			REV__MSTB1_dup2996|chr10:87245512-87245766:-|1.5134867153175602|0.377805891187829|2.0|62.0|15|2|anti-sense	REV__MSTB1_dup2996|chr10:87245512-87245766:-|1.5134867153175602|0.377805891187829|2.0|62.0|15|2|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.23687744140625	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.8347	1	7030	7030		23.042	4.7181	1	1341700	+		11373	29662	7969	7977	12966	12966					0.04243184505889985
GKSKALTK	8	Unmodified	_GKSKALTK_					0	0	0			REV__ENST00000483847.1_1_3:47712102-47719818:-|nuORF	REV__ENST00000483847.1_1_3:47712102-47719818:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2583312988281	2	416.766178	831.517802	1.1341	0.00047266	-0.59276	-0.00024704	0.54136	0.00022562	416.7657887914877	24.022	2.4273	23.641	22.267	24.695	-0.38178					76	55	2	0	0	0	0.4196	1	982	982		5.9211	0	1	85795	+		11374	21927	7970	7978	12967	12967					0.09530392622696127
GKSKIKFLFQN	11	Unmodified	_GKSKIKFLFQN_					0	0	0		ENSG00000147481|ENST00000642720|SNTG1	ENSG00000147481|ENST00000642720|SNTG1	ENSG00000147481|ENST00000642720|SNTG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.25665283203125	3	437.259079	1308.75541	-1.8163	-0.00079418	-2.1335	-0.00093288	-3.9497	-0.0017271	437.2580894693445	99.183	2.5872	99.369	98.322	100.91	0.18581					159	59	3	0	0	0	0.73277	1	10221	10221		25.892	4.1113	1	447430			11375	4907	7971	7979	12968	12968					0.11337913765282792
GKSLVSLHG	9	Unmodified	_GKSLVSLHG_					0	0	0			REV__ENST00000476967.1_1_3:32811275-32811398:+|nuORF	REV__ENST00000476967.1_1_3:32811275-32811398:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.2610778808594	2	449.261259	896.507966	-0.14415	-6.4761E-05	-1.5249	-0.00068508	-1.6691	-0.00074984	449.2602647211942	72.863	0.66953	72.903	72.644	73.313	0.040031					41	22	3	0	0	0	0.78528	1	6941	6941		29.17	1.2878	1	185370	+		11376	27346	7972	7980	12969	12969					0.05557204617332445
GKSPALEPEP	10	Unmodified	_GKSPALEPEP_					0	0	0			REV__ENST00000240100.6_1_8:29194463-29194535:-|nuORF	REV__ENST00000240100.6_1_8:29194463-29194535:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.76953125	2	512.769114	1023.52368	0.1162	5.9582E-05	0.8675	0.00044483	0.98369	0.00050441	512.7692913700915	49.157	1.1049	49.152	48.693	49.798	-0.0056419					48	24	3	0	0	0	0.51302	1	4082	4082		54.776	0.053964	1	252440	+		11377	24223	7973	7981	12970	12970					0.012854463436951846
GKSTAKVI	8	Unmodified	_GKSTAKVI_					0	0	0			REV__ENSG00000170950|ENST00000304801|PGK2	REV__ENSG00000170950|ENST00000304801|PGK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.25213623046875	2	402.252903	802.491253	2.8931	0.0011637	-3.76	-0.0015125	-0.86692	-0.00034872	402.25130095355667	20.226	0.39619	20.156	19.943	20.339	-0.070011					29	16	2	0	0	0	0.82658	1	500	500		21.96	2.5999	1	78956	+		11378	21704	7974	7982	12971	12971					0.08210703731378999
GKTEAESRIL	10	Unmodified	_GKTEAESRIL_					0	0	0			REV__ENST00000524622.5_1_12:55342974-55343028:-|nuORF	REV__ENST00000524622.5_1_12:55342974-55343028:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.3065795898438	2	552.306395	1102.59824	0.7768	0.00042903	-0.63241	-0.00034928	0.14439	7.9746E-05	552.3060097260034	92.551	2.2776	92.998	91.922	94.2	0.44661					137	53	3	0	0	0	0.86218	1	10958	10958		32.812	8.2932	1	579750	+		11379	28169	7975	7983	12972	12972					0.05104209155092576
GKTHNMLCLP	10	Unmodified	_GKTHNMLCLP_					0	0	0			REV__ENSG00000181378|ENST00000341552|CFAP65	REV__ENSG00000181378|ENST00000341552|CFAP65	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.2802734375	2	557.280812	1112.54707	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.233	1	68.264	67.764	68.764	0.030571								0	0	0	0.45132	1	6507	6507		30.318	1.1477	1		+		11380	22454	7976	7984	12973	12973					-0.00470154414983881
GKTKARRAAM	10	Unmodified	_GKTKARRAAM_					0	0	0		ENSG00000164744|ENST00000297325|SUN3	ENSG00000164744|ENST00000297325|SUN3	ENSG00000164744|ENST00000297325|SUN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3165893554688	2	545.319117	1088.62368	-0.68756	-0.00037494	-3.6791	-0.0020063	-4.3667	-0.0023812	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.82886	1	8653	8653		37.812	4.9991	1	3608000			11381	5999	7977	7985	12974	12974					0.08291405196519008
GKTKARRAAM	10	Unmodified	_GKTKARRAAM_					0	0	0		ENSG00000164744|ENST00000297325|SUN3	ENSG00000164744|ENST00000297325|SUN3	ENSG00000164744|ENST00000297325|SUN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3170776367188	2	545.319117	1088.62368	-0.33932	-0.00018504	-4.1219	-0.0022477	-4.4612	-0.0024328	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.86348	2	8875	8875;9135		31.53	2.3598	1	4710900			11382	5999	7977	7985	12975;12976	12975					0.08291405196519008
GKTKARRAAM	10	Unmodified	_GKTKARRAAM_					0	0	0		ENSG00000164744|ENST00000297325|SUN3	ENSG00000164744|ENST00000297325|SUN3	ENSG00000164744|ENST00000297325|SUN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3168334960938	2	545.319117	1088.62368	0.15577	8.4944E-05	-4.3651	-0.0023803	-4.2093	-0.0022954	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.67571	3	9488	9269;9380;9488		45.972	14.017	1	17220000			11383	5999	7977	7985	12977;12978;12979	12979					0.08291405196519008
GKTKARRAAM	10	Unmodified	_GKTKARRAAM_					0	0	0		ENSG00000164744|ENST00000297325|SUN3	ENSG00000164744|ENST00000297325|SUN3	ENSG00000164744|ENST00000297325|SUN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3167724609375	2	545.319117	1088.62368	-1.465	-0.00079892	-3.0332	-0.001654	-4.4982	-0.002453	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.86218	3	8640	8590;8640;8866		32.812	2.4947	1	4998200			11384	5999	7977	7985	12980;12981;12982	12981					0.08291405196519008
GKTKARRAAM	10	Unmodified	_GKTKARRAAM_					0	0	0		ENSG00000164744|ENST00000297325|SUN3	ENSG00000164744|ENST00000297325|SUN3	ENSG00000164744|ENST00000297325|SUN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3152465820312	2	545.319117	1088.62368	-1.3538	-0.00073823	-2.9879	-0.0016294	-4.3417	-0.0023676	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.82886	1	10338	10338		37.812	6.2817	1	5184000			11385	5999	7977	7985	12983	12983					0.08291405196519008
GKTKVEIVFV	10	Unmodified	_GKTKVEIVFV_					0	0	0			REV__ENSG00000100365|ENST00000248899|NCF4	REV__ENSG00000100365|ENST00000248899|NCF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3403930664062	2	560.342249	1118.66995	-1.1297	-0.00063301	-2.5217	-0.001413	-3.6514	-0.002046	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.86698	1	11199	11199		28.081	2.5074	1	84412000	+		11386	17182	7978	7986	12984	12984					0.11535748579603933
GKTKVEIVFV	10	Unmodified	_GKTKVEIVFV_					0	0	0			REV__ENSG00000100365|ENST00000248899|NCF4	REV__ENSG00000100365|ENST00000248899|NCF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.340576171875	2	560.342249	1118.66995	0.39666	0.00022227	-4.1426	-0.0023213	-3.7459	-0.002099	560.3399034928755	102.04	3.4939	102.24	101.58	105.08	0.19484					369	86	7	0	0	0	0.8545	1	10982	10982		36.447	0	1	135510000	+		11387	17182	7978	7986	12985	12985					0.11535748579603933
GKTKVISEQN	10	Unmodified	_GKTKVISEQN_					0	0	0		ENST00000393480.3_1_7:116140843-116140951:+|nuORF	ENST00000393480.3_1_7:116140843-116140951:+|nuORF	ENST00000393480.3_1_7:116140843-116140951:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3063354492188	2	552.306395	1102.59824	0.26261	0.00014504	-0.18156	-0.00010027	0.081052	4.4766E-05	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.8545	1	9360	9360		36.447	1.2947	1	1950800			11388	11049	7979	7987	12986	12986					0.05104209155092576
GKTSVTKL	8	Unmodified	_GKTSVTKL_					0	0	0			REV__nc|ENSG00000065618|Q9UMD9-2|COL17A1	REV__nc|ENSG00000065618|Q9UMD9-2|COL17A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2582702636719	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.81567	1	549	549		14.865	0.72775	1	867930	+		11389	16507	7980	7988	12987	12987					0.07886686385802477
GKTSVTKL	8	Unmodified	_GKTSVTKL_					0	0	0			REV__nc|ENSG00000065618|Q9UMD9-2|COL17A1	REV__nc|ENSG00000065618|Q9UMD9-2|COL17A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.257080078125	2	417.258185	832.501818	0.52563	0.00021932	-0.071237	-2.9724E-05	0.45439	0.0001896	417.2580621570988	22.515	2.686	21.904	21.633	24.319	-0.6107					140	63	3	0	0	0	0.89294	1	1031	1031		7.1934	0	1	2260100	+		11390	16507	7980	7988	12988	12988					0.07886686385802477
GKVDEGPL	8	Unmodified	_GKVDEGPL_					0	0	0			REV__nc|ENSG00000124140|Q9H2X9|SLC12A5	REV__nc|ENSG00000124140|Q9H2X9|SLC12A5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7853088378906	2	407.718893	813.423233	1.6021	0.00065319	3.7258	0.0015191	5.3279	0.0021723	407.7217878201091	34.786	0.16745	34.793	34.695	34.862	0.0063934					5	4	2	0	0	0	0.4196	1	2140	2140		47.657	17.154	1	6517.5	+		11391	29822	7981	7989	12989	12989					0.009058340807087006
GKVFVVITLTG	11	Unmodified	_GKVFVVITLTG_					0	0	0		ENSG00000027075|ENST00000332981|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3302001953125	2	567.350074	1132.6856	-1.3958	-0.0007919	-4.132	-0.0023443	-5.5278	-0.0031362	567.3475429567867	91.666	0.13004	91.852	91.743	91.873	0.18582					4	2	2	0	0	0	0.17472	1	9190	9190		24.519	4.5224	1	33456			11392	873	7982	7990	12990	12990					0.12456035096647611
GKVGAHAGEY	10	Unmodified	_GKVGAHAGEY_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7456359863281	2	494.745973	987.477394	1.0031	0.00049629	-0.78594	-0.00038884	0.21718	0.00010745	494.74542470137317	19.776	0.3728	19.847	19.665	20.038	0.071127					30	14	3	0	0	0	0.51302	1	437	437		54.776	5.3348	1	78653			11393	7934	7983	7991	12991	12991					-0.016845737677272155
GKVGAHAGEY	10	Unmodified	_GKVGAHAGEY_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7467346191406	2	494.745973	987.477394	-0.26414	-0.00013068	0.42806	0.00021178	0.16392	8.1098E-05	494.746082748981	20.091	0.40257	20.021	19.863	20.266	-0.069735					27	15	2	0	0	0	0.67571	3	507	492;498;507		45.972	10.052	1	109920			11394	7934	7983	7991	12992;12993;12994	12994					-0.016845737677272155
GKVGAHAGEY	10	Unmodified	_GKVGAHAGEY_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.74609375	2	494.745973	987.477394	-0.92884	-0.00045954	1.1549	0.00057136	0.22601	0.00011182	494.746405987862	20.119	0.36457	20.049	19.903	20.268	-0.070013					31	15	3	0	0	0	0.23822	1	492	492		79.713	35.596	1	104440			11395	7934	7983	7991	12995	12995					-0.016845737677272155
GKVGAHAGEY	10	Unmodified	_GKVGAHAGEY_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7462158203125	2	494.745973	987.477394	-0.72364	-0.00035802	0.81794	0.00040467	0.094301	4.6655E-05	494.74623529798345	19.99	0.36725	20.034	19.884	20.251	0.043749					27	17	2	0	0	0	0.60985	1	457	457		49.536	11.725	1	139020			11396	7934	7983	7991	12996	12996					-0.016845737677272155
GKVGAHAGEY	10	Unmodified	_GKVGAHAGEY_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7452087402344	2	494.745973	987.477394	0.29138	0.00014416	-0.49107	-0.00024295	-0.19969	-9.8795E-05	494.7456472678776	21.082	0.72805	20.623	20.28	21.008	-0.4591					43	17	4	0	0	0	0.16557	3	734	721;734;747		93.143	31.036	1	379970			11397	7934	7983	7991	12997;12998;12999	12998					-0.016845737677272155
GKVGAHAGEY	10	Unmodified	_GKVGAHAGEY_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.74481201171875	2	494.745973	987.477394	-0.20903	-0.00010342	0.13401	6.6302E-05	-0.075022	-3.7117E-05	494.7458632132586	21.306	0.76947	20.677	20.374	21.144	-0.62835					45	20	4	0	0	0	0.14384	2	757	757;769		95.815	31.608	1	445500			11398	7934	7983	7991	13000;13001	13000					-0.016845737677272155
GKVGAHAGEY	10	Unmodified	_GKVGAHAGEY_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	494.745973	987.477394	0.076304	3.7751E-05	0.45757	0.00022638	0.53387	0.00026413	494.745822456965	19.819	0.3105	19.89	19.741	20.052	0.070713	-0.058222	8.2671E-05	NaN	79.713	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	187580			11399	7934	7983	7991							-0.016845737677272155
GKVGGHAAEY	10	Unmodified	_GKVGGHAAEY_					0	0	0		CON__P01966	CON__P01966	CON__P01966	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7458190917969	2	494.745973	987.477394	0.29138	0.00014416	-0.49107	-0.00024295	-0.19969	-9.8795E-05	494.7456472678776	21.082	0.72805	20.623	20.28	21.008	-0.4591					43	17	4	0	0	0	0.80179	1	714	714		39.253	1.4413	1	379970		+	11400	579	7984	7992	13002	13002					-0.01684573767738584
GKVHLVVFN	9	Unmodified	_GKVHLVVFN_					0	0	0		chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4;ENSG00000113296|ENST00000350881|THBS4	chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4	chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.799560546875	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.371	1	53.366	52.866	53.866	-0.0053711								0	0	0	0.30778	1	4662	4662		27.882	0	1				11401	459	7985	7993	13003	13003					0.08122056922411502
GKVHLVVFN	9	Unmodified	_GKVHLVVFN_					0	0	0		chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4;ENSG00000113296|ENST00000350881|THBS4	chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4	chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8011169433594	2	506.800552	1011.58655	-0.49867	-0.00025273	1.4784	0.00074926	0.97973	0.00049653	506.80125930962566	45.611	0.78478	45.623	45.395	46.179	0.012058					40	21	2	0	0	0	0.7932	1	3286	3286		21.96	0.25755	1	207840			11402	459	7985	7993	13004	13004					0.08122056922411502
GKVKVGKH	8	Unmodified	_GKVKVGKH_					0	0	0		ENSG00000132356|ENST00000397128|PRKAA1;nc|ENSG00000132356|Q13131-2|PRKAA1;ENST00000511248.1_1_5:40777545-40798228:-|nuORF;ENST00000397006.2_1_5:40777312-40798264:-|nuORF	ENSG00000132356|ENST00000397128|PRKAA1;ENST00000397006.2_1_5:40777312-40798264:-|nuORF	ENSG00000132356|ENST00000397128|PRKAA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.30279541015625	2	426.774337	851.534121	0.43755	0.00018673	-1.3071	-0.00055785	-0.86959	-0.00037112	426.77396884404	67.827	0.31155	67.954	67.85	68.161	0.12748					17	11	2	0	0	0	0.4196	1	6100	6100		18.324	0	1	31872			11403	3785;11132	7986	7994	13005	13005					0.10241518579471176
GKVLVSRPPL	10	Unmodified	_GKVLVSRPPL_					0	0	0			REV__ENSG00000140459|ENST00000268053|CYP11A1	REV__ENSG00000140459|ENST00000268053|CYP11A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.3397827148438	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.80179	1	10121	10121		39.253	10.103	1	1199500	+		11404	19618	7987	7995	13006	13006					0.1408658801931324
GKVNAPIL	8	Unmodified	_GKVNAPIL_					0	0	0		ENST00000479370.1_1_1:222835617-222835698:+|nuORF	ENST00000479370.1_1_1:222835617-222835698:+|nuORF	ENST00000479370.1_1_1:222835617-222835698:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2599182128906	2	406.255446	810.496338	1.7504	0.00071112	3.3871	0.001376	5.1375	0.0020872	406.2567555668185	56.937	0.80713	56.971	56.648	57.455	0.033184					41	27	2	0	0	0	0.4196	1	5214	5214		25.45	21.134	1	148160			11405	12407	7988	7996	13007	13007					0.08351007593978466
GKVNAPIL	8	Unmodified	_GKVNAPIL_					0	0	0		ENST00000479370.1_1_1:222835617-222835698:+|nuORF	ENST00000479370.1_1_1:222835617-222835698:+|nuORF	ENST00000479370.1_1_1:222835617-222835698:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.258056640625	2	406.255446	810.496338	0.27279	0.00011082	3.6804	0.0014952	3.9532	0.001606	406.25677816056157	49.48	2.6493	49.522	48.485	51.134	0.042236					135	72	3	0	0	0	0.884	1	3862	3862		33.516	1.5607	1	326490			11406	12407	7988	7996	13008	13008					0.08351007593978466
GKVNAPIL	8	Unmodified	_GKVNAPIL_					0	0	0		ENST00000479370.1_1_1:222835617-222835698:+|nuORF	ENST00000479370.1_1_1:222835617-222835698:+|nuORF	ENST00000479370.1_1_1:222835617-222835698:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2578125	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.86288	1	3850	3850		26.796	1.3459	1	334920			11407	12407	7988	7996	13009	13009					0.08351007593978466
GKVNAPIL	8	Unmodified	_GKVNAPIL_					0	0	0		ENST00000479370.1_1_1:222835617-222835698:+|nuORF	ENST00000479370.1_1_1:222835617-222835698:+|nuORF	ENST00000479370.1_1_1:222835617-222835698:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	406.255446	810.496338	-0.16707	-6.7873E-05	4.9661	0.0020175	4.799	0.0019496	406.2573549066074	56.976	1.6178	56.964	56.551	58.169	-0.012203	0.042301	-0.00041133	NaN	25.45	82	58	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188370			11408	12407	7988	7996							0.08351007593978466
GKVNAPIL	8	Unmodified	_GKVNAPIL_					0	0	0		ENST00000479370.1_1_1:222835617-222835698:+|nuORF	ENST00000479370.1_1_1:222835617-222835698:+|nuORF	ENST00000479370.1_1_1:222835617-222835698:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.8713	-0.00076025	7.2247	0.0029351	5.3534	0.0021748	406.2582554328784	56.758	0.83639	56.83	56.618	57.455	0.071835	-0.091607	0.0014239	NaN	25.45	54	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	372290			11409	12407	7988	7996							0.08351007593978466
GKVPFKAKH	9	Unmodified	_GKVPFKAKH_					0	0	0			REV__ENST00000450169.6_1_7:32526725-32526845:-|nuORF	REV__ENST00000450169.6_1_7:32526725-32526845:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.30792236328125	2	506.308544	1010.60253	0.13031	6.5978E-05	0.93041	0.00047107	1.0607	0.00053705	506.3090702078247	39.447	1.2074	39.394	38.87	40.077	-0.052731					48	32	2	0	0	0	0.7932	1	2435	2435		21.96	2.5999	1	139930	+		11410	26864	7989	7997	13010	13010					0.0976576315931652
GKVQKHQA	8	Unmodified	_GKVQKHQA_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.2589111328125	2	448.259051	894.503549	0.65386	0.0002931	-0.54104	-0.00024253	0.11282	5.0571E-05	448.25866214707224	89.921	4.4379	90.073	86.786	91.224	0.1519					231	105	5	0	0	0	0.85277	1	9045	9045		25.45	0	1	2709200			11411	8189	7990	7998	13011	13011					0.05207740194418875
GKVRGPIV	8	Unmodified	_GKVRGPIV_					0	0	0		ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2678527832031	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.85277	1	2250	2250		25.45	2.4077	1	268720			11412	3978	7991	7999	13012	13012					0.10394116205179671
GKVRILIA	8	Unmodified	_GKVRILIA_					0	0	0		ENSG00000080007|ENST00000370336|DDX43	ENSG00000080007|ENST00000370336|DDX43	ENSG00000080007|ENST00000370336|DDX43	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2993469238281	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.80706	2	8616	8507;8616		19.36	1.0356	1	6323600			11413	1432	7992	8000	13013;13014	13014					0.14627262273370434
GKVRLNNNHL	10	Unmodified	_GKVRLNNNHL_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.833740234375	2	582.833446	1163.65234	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.329	1	94.764	94.264	95.264	0.43539								0	0	0	0.45132	1	11299	11299		29.15	2.3535	1				11414	7939	7993	8001	13015	13015					0.07705846097314861
GKVRLRRA	8	Unmodified	_GKVRLRRA_					0	0	0		ENSG00000198768|ENST00000371149|APCDD1L	ENSG00000198768|ENST00000371149|APCDD1L	ENSG00000198768|ENST00000371149|APCDD1L	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8041687011719	2	478.317235	954.619916	-1.7778	-0.00085034	-4.4368	-0.0021222	-6.2146	-0.0029725	478.3149318380024	38.089	1.0209	38.089	37.752	38.773	0					35	24	2	0	0	0	0.4196	1	2355	2355		17.365	5.1581	1	49733			11415	8327	7994	8002	13016	13016					0.14079103484982625
GKVRRKVT	8	Unmodified	_GKVRRKVT_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28741455078125	2	472.311618	942.608683	-1.7051	-0.00080535	-2.7091	-0.0012796	-4.4143	-0.0020849	472.3104958474977	95.13	0.20177	95.333	95.273	95.474	0.20242					7	4	2	0	0	0	0.4196	1	9692	9692		10.866	0	1	156030			11416	3217	7995	8003	13017	13017					0.13508281390852517
GKVSLLRP	8	Unmodified	_GKVSLLRP_					0	0	0			REV__ENSG00000065526|ENST00000375759|SPEN	REV__ENSG00000065526|ENST00000375759|SPEN	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.27923583984375	2	435.281995	868.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.525	1	67.577	67.077	68.077	0.052368								0	0	0	0.29857	1	6020	6020		39.253	5.0803	1		+		11417	16503	7996	8004	13018	13018					0.10990385376658196
GKVSYEDVDH	10	Unmodified	_GKVSYEDVDH_					0	0	0		ENSG00000196123|ENST00000563902|MATCAP1;ENST00000581724.1_1_18:10726700-10726934:+|nuORF;ENST00000563918.5_1_16:67210716-67213197:-|nuORF;nc|ENSG00000196123|Q68EN5-3|MATCAP1;ENST00000561679.5_1_16:67210716-67212831:-|nuORF	ENSG00000196123|ENST00000563902|MATCAP1	ENSG00000196123|ENST00000563902|MATCAP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8002319335938	2	574.76456	1147.51457	-0.039251	-2.256E-05	-2.7649	-0.0015892	-2.8041	-0.0016117	574.7628165137494	72.222	0.41507	72.262	72.035	72.45	0.040222					30	17	3	0	0	0	0.37624	1	6952	6952		24.519	0	1	92933			11418	8013	7997	8005	13019	13019					-0.05328947012617391
GKVTKTIH	8	Unmodified	_GKVTKTIH_					0	0	0			REV__ENSG00000082397|ENST00000341928|EPB41L3	REV__ENSG00000082397|ENST00000341928|EPB41L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.27099609375	2	442.271627	882.528701	-0.83468	-0.00036915	-0.31464	-0.00013916	-1.1493	-0.00050831	442.2714568018733	84.382	2.5266	84.818	83.748	86.275	0.43538					144	61	4	0	0	0	0.79403	2	9754	9754;9842		63.306	9.9548	1	3031500	+		11419	16839	7998	8006	13020;13021	13020					0.08273794996978268
GKVTVKPGK	9	Unmodified	_GKVTVKPGK_					0	0	0			REV__chr15:64160137-64162852|23|53.57|0.03|10.8|-|0|None,PPIB|1	REV__chr15:64160137-64162852|23|53.57|0.03|10.8|-|0|None,PPIB|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3009948730469	2	457.295102	912.575651	-0.066248	-3.0295E-05	-0.89979	-0.00041147	-0.96604	-0.00044176	457.2946465670805	46.533	0.69328	46.529	46.112	46.805	-0.0041618					22	16	2	0	0	0	0.20789	1	3774	3774		42.864	19.822	1	135900	+		11420	15617	7999	8007	13022	13022					0.11586654548125352
GKVVEGTPLID	11	Unmodified	_GKVVEGTPLID_					0	0	0		ENSG00000143815|ENST00000272163|LBR	ENSG00000143815|ENST00000272163|LBR	ENSG00000143815|ENST00000272163|LBR	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	564.3220825195312	2	564.318971	1126.62339	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.42	1	55.483	54.983	55.983	0.063725								0	0	0	0.56276	1	4638	4638		23.523	0.48021	1				11421	4665	8000	8008	13023	13023					0.0651426395766066
GKVVERKPG	9	Unmodified	_GKVVERKPG_					0	0	0			REV__ENSG00000165757|ENST00000375377|JCAD	REV__ENSG00000165757|ENST00000375377|JCAD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2956848144531	2	485.295633	968.576714	0.78793	0.00038238	-1.1089	-0.00053813	-0.32094	-0.00015575	485.295065671044	102.16	1.2234	102.29	101.76	102.98	0.13523					49	29	2	0	0	0	0.7932	1	10747	10747		26.693	2.1889	1	520690	+		11422	21214	8001	8009	13024	13024					0.09116868917044485
GKVVERKPG	9	Unmodified	_GKVVERKPG_					0	0	0			REV__ENSG00000165757|ENST00000375377|JCAD	REV__ENSG00000165757|ENST00000375377|JCAD	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	485.295633	968.576714	-0.088257	-4.2831E-05	-0.28091	-0.00013633	-0.36917	-0.00017916	485.2954418290789	102.36	1.2851	102.38	101.77	103.06	0.01989	0.091233	-0.00014411	NaN	26.693	44	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	311730	+		11423	21214	8001	8009							0.09116868917044485
GKVVERKPG	9	Unmodified	_GKVVERKPG_					0	0	0			REV__ENSG00000165757|ENST00000375377|JCAD	REV__ENSG00000165757|ENST00000375377|JCAD	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	485.295633	968.576714	2.8244	0.0013706	-3.3986	-0.0016493	-0.57426	-0.00027868	485.2939170123049	102.34	1.2103	102.29	101.7	102.91	-0.047005	-0.0021764	-0.0031701	NaN	26.693	35	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	263420	+		11424	21214	8001	8009							0.09116868917044485
GKVVERKPG	9	Unmodified	_GKVVERKPG_					0	0	0			REV__ENSG00000165757|ENST00000375377|JCAD	REV__ENSG00000165757|ENST00000375377|JCAD	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	485.295633	968.576714	-0.8052	-0.00039076	0.36787	0.00017852	-0.43733	-0.00021223	485.2957547738252	102.17	1.1101	102.21	101.77	102.88	0.043198	-0.084845	0.00048559	NaN	26.693	37	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	298800	+		11425	21214	8001	8009							0.09116868917044485
GKVVERKPG	9	Unmodified	_GKVVERKPG_					0	0	0			REV__ENSG00000165757|ENST00000375377|JCAD	REV__ENSG00000165757|ENST00000375377|JCAD	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	485.295633	968.576714	-0.71733	-0.00034812	0.34351	0.0001667	-0.37382	-0.00018142	485.29578634245615	102.08	1.1376	102.28	101.8	102.94	0.19484	-0.015847	0.00046195	NaN	26.693	38	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	498200	+		11426	21214	8001	8009							0.09116868917044485
GKVVERKPG	9	Unmodified	_GKVVERKPG_					0	0	0			REV__ENSG00000165757|ENST00000375377|JCAD	REV__ENSG00000165757|ENST00000375377|JCAD	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	485.295633	968.576714	0.78793	0.00038238	-1.1089	-0.00053813	-0.32094	-0.00015575	485.295065671044	102.16	1.2234	102.29	101.76	102.98	0.13523	-0.0032235	-0.00094772	NaN	26.693	49	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	520690	+		11427	21214	8001	8009							0.09116868917044485
GKWANHLLIGI	11	Unmodified	_GKWANHLLIGI_					0	0	0			REV__ENSG00000173250|ENST00000311104|GPR151	REV__ENSG00000173250|ENST00000311104|GPR151	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.35498046875	2	611.358765	1220.70298	-1.2523	-0.00076561	-3.3028	-0.0020192	-4.5551	-0.0027848	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.72918	1	9437	9437		26.693	1.1189	1	5978100	+		11428	21907	8002	8010	13025	13025					0.10145375422325742
GKYGQLGHE	9	Unmodified	_GKYGQLGHE_					0	0	0		ENST00000557266.5_1_15:91500194-91504996:+|nuORF;ENSG00000166965|ENST00000394258|RCCD1	ENST00000557266.5_1_15:91500194-91504996:+|nuORF	ENST00000557266.5_1_15:91500194-91504996:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7441101074219	2	494.745973	987.477394	-1.948	-0.00096374	2.2148	0.0010958	0.26686	0.00013203	494.7468602753015	19.884	0.31674	19.884	19.75	20.067	0					22	14	2	0	0	0	0.67345	1	447	447		42.396	3.1433	1	57810			11429	6255	8003	8011	13026	13026					-0.016845737677158468
GKYHDGDFN	9	Unmodified	_GKYHDGDFN_					0	0	0		ENSG00000164855|ENST00000297477|TMEM184A	ENSG00000164855|ENST00000297477|TMEM184A	ENSG00000164855|ENST00000297477|TMEM184A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.2858276367188	2	526.725238	1051.43592	1.695	0.00089278	1.4657	0.00077201	3.1606	0.0016648	526.7258557780826	27.332	0.59858	27.078	26.855	27.454	-0.25465					21	13	2	0	0	0	0.20789	1	1552	1552		39.253	21.888	1	182390			11430	6012	8004	8012	13027	13027					-0.08773754527032906
GKYPVMRRIC	10	Carbamidomethyl (C)	_GKYPVMRRIC(Carbamidomethyl (C))_	GKYPVMRRIC(1)		GKYPVMRRIC(49)		0	1	0			REV__ENSG00000248746|ENST00000513398|ACTN3	REV__ENSG00000248746|ENST00000513398|ACTN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3463745117188	2	640.341735	1278.66892	4.3956	0.0028147	3.3712	0.0021587	7.7668	0.0049734	640.343646089099	102.73	0.67924	103.03	102.81	103.49	0.29865					86	22	4	0	0	0	0.6116	1	12559	12559		49.442	6.5773	1	12674000	+		11431	23861	8005	8013	13028	13028	289				0.040728876674165804
GKYQLLTSVLQ	11	Unmodified	_GKYQLLTSVLQ_					0	0	0		ENSG00000179941|ENST00000650064|BBS10	ENSG00000179941|ENST00000650064|BBS10	ENSG00000179941|ENST00000650064|BBS10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.36767578125	2	625.36117	1248.70779	3.8331	0.0023971	4.1384	0.002588	7.9715	0.004985	625.3634210575901	102.74	1.2377	103.04	102.73	103.96	0.29865					76	35	3	0	0	0	0.41466	1	12524	12524		58.23	1.7961	1	12629000			11432	7308	8006	8014	13029	13029					0.09338214774425069
GLAALLAVAI	10	Unmodified	_GLAALLAVAI_					0	0	0			REV__ENSG00000179002|ENST00000375371|TAS1R2	REV__ENSG00000179002|ENST00000375371|TAS1R2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7921447753906	2	456.299853	910.585153	-1.252	-0.0005713	2.9269	0.0013355	1.6748	0.00076423	456.30103262092905	42.189	0.6473	42.194	41.908	42.555	0.0043983					35	17	3	0	0	0	0.37624	1	2864	2864		35.201	19.559	1	205580	+		11433	22307	8007	8015	13030	13030					0.1262842283365444
GLAALLAVAI	10	Unmodified	_GLAALLAVAI_					0	0	0			REV__ENSG00000179002|ENST00000375371|TAS1R2	REV__ENSG00000179002|ENST00000375371|TAS1R2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79205322265625	2	456.299853	910.585153	-2.7466	-0.0012533	3.6008	0.001643	0.85414	0.00038975	456.30134035320407	41.652	1.2821	42.066	41.223	42.505	0.4139					70	34	3	0	0	0	0.37624	1	3639	3639		12.959	0	1	3003600	+		11434	22307	8007	8015	13031	13031					0.1262842283365444
GLAAMVHGA	9	Unmodified	_GLAAMVHGA_					0	0	0			REV__nc|ENSG00000185271|A6NCF5|KLHL33	REV__nc|ENSG00000185271|A6NCF5|KLHL33	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2375183105469	2	413.71563	825.416708	-0.2917	-0.00012068	-0.41383	-0.00017121	-0.70553	-0.00029189	413.71730298702846	75.714	1.3806	75.668	74.93	76.311	-0.045975					38	36	2	0	0	0	0.20789	1	7426	7426		21.702	7.0382	1	49230	+		11435	22755	8008	8016	13032	13032					-0.002983823516387929
GLAAVKYLT	9	Unmodified	_GLAAVKYLT_					0	0	0			REV__ENSG00000114650|ENST00000265565|SCAP;REV__nc|ENSG00000114650|Q12770-2|SCAP	REV__ENSG00000114650|ENST00000265565|SCAP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7233581542969	2	468.28166	934.548768	-1.2887	-0.00060349	-1.3717	-0.00064236	-2.6605	-0.0012458	468.2810118404495	87.352	0.54141	87.815	87.394	87.936	0.46312					15	12	2	0	0	0	0.20789	1	10291	10291		26.693	0	1	171760	+		11436	18058;29792	8009	8017	13033	13033					0.07887545936932838
GLAAYTAPL	9	Unmodified	_GLAAYTAPL_					0	0	0		ENSG00000128652|ENST00000683222|HOXD3	ENSG00000128652|ENST00000683222|HOXD3	ENSG00000128652|ENST00000683222|HOXD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.7432861328125	2	438.744911	875.475269	-0.39426	-0.00017298	-2.4633	-0.0010808	-2.8576	-0.0012537	438.7437706121158	17.006	0.25335	16.926	16.801	17.055	-0.079056					13	8	2	0	0	0	0.7932	1	177	177		25.45	3.7478	1	36655			11437	3558	8010	8018	13034	13034					0.032549974944686255
GLAFRRRRGVG	11	Unmodified	_GLAFRRRRGVG_					0	0	0			REV__ENST00000430328.6_1_2:152266682-152266823:+|nuORF	REV__ENST00000430328.6_1_2:152266682-152266823:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.5903625488281	3	415.586412	1243.73741	1.1825	0.00049144	1.5801	0.00065666	2.7626	0.0011481	415.58682044538546	33.506	0.58651	33.675	33.356	33.943	0.16971					40	13	4	0	0	0	0.61774	1	2411	2411		36.318	0	1	838100	+		11438	26600	8011	8019	13035	13035					0.1252863635374979
GLAIKLVR	8	Unmodified	_GLAIKLVR_					0	0	0			REV__ENST00000300417.10_1_9:130214250-130216838:+|nuORF	REV__ENST00000300417.10_1_9:130214250-130216838:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3004150390625	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.84341	1	7367	7367		24.203	3.7209	1	881780	+		11439	24749	8012	8020	13036	13036					0.14627262273359065
GLAKAKRR	8	Unmodified	_GLAKAKRR_					0	0	0		nc|ENSG00000125851|P16519-3|PCSK2;ENSG00000125851|ENST00000262545|PCSK2	nc|ENSG00000125851|P16519-3|PCSK2	nc|ENSG00000125851|P16519-3|PCSK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.27435302734375	2	450.29851	898.582468	-0.44018	-0.00019821	-2.795	-0.0012586	-3.2351	-0.0014568	450.29701023123323	92.809	0.24213	93.258	93.158	93.4	0.44988					7	5	2	0	0	0	0.4196	1	11085	11085		13.775	5.544	1	88667			11440	3422	8013	8021	13037	13037					0.12912012219362623
GLAKAPRL	8	Unmodified	_GLAKAPRL_					0	0	0			REV__ENST00000371754.8_2_20:47894579-47894954:-|nuORF	REV__ENST00000371754.8_2_20:47894579-47894954:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.267333984375	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.52	1	67.655	67.155	68.155	0.13522								0	0	0	0.29353	1	6029	6029		28.254	0	1		+		11441	25699	8014	8022	13038	13038					0.10394116205168302
GLAKTARR	8	Unmodified	_GLAKTARR_					0	0	0			REV__nc|ENSG00000138002|Q9UG01-3|IFT172	REV__nc|ENSG00000138002|Q9UG01-3|IFT172	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2739562988281	2	436.774868	871.535184	0.39754	0.00017364	-3.7525	-0.001639	-3.355	-0.0014654	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.82136	1	1190	1190		14.137	1.1779	1	81327	+		11442	29880	8015	8023	13039	13039					0.09427732948370249
GLALFREL	8	Unmodified	_GLALFREL_					0	0	0		ENSG00000168394|ENST00000354258|TAP1;nc|ENSG00000168394|Q03518-2|TAP1	ENSG00000168394|ENST00000354258|TAP1	ENSG00000168394|ENST00000354258|TAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	459.7752380371094	2	459.774003	917.533452	0.19023	8.7461E-05	3.8068	0.0017503	3.9971	0.0018377	459.7755758035511	20.674	0.66559	20.215	19.961	20.627	-0.4591					35	15	3	0	0	0	0.73851	1	678	678		65.803	5.5092	1	216570			11443	6398	8016	8024	13040	13040					0.07138679139745818
GLALFREL	8	Unmodified	_GLALFREL_					0	0	0		ENSG00000168394|ENST00000354258|TAP1;nc|ENSG00000168394|Q03518-2|TAP1	ENSG00000168394|ENST00000354258|TAP1	ENSG00000168394|ENST00000354258|TAP1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	459.774003	917.533452	-0.11372	-5.2287E-05	4.0317	0.0018537	3.918	0.0018014	459.7757031479285	20.873	0.86124	20.245	19.901	20.762	-0.62835	0.014889	8.7556E-05	NaN	65.803	44	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	238860			11444	6398	8016	8024							0.07138679139745818
GLALGRQRA	9	Unmodified	_GLALGRQRA_					0	0	0		ENST00000242059.9_1_7:29962427-29962463:-|nuORF	ENST00000242059.9_1_7:29962427-29962463:-|nuORF	ENST00000242059.9_1_7:29962427-29962463:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.79473876953125	2	471.2856	940.556647	-1.6047	-0.00075627	3.1538	0.0014864	1.5491	0.00073008	471.28709375556116	44.536	1.4109	45.381	45.145	46.556	0.84438					44	34	2	0	0	0	0.20789	1	4275	4275		45.952	8.9235	1	253310			11445	9250	8017	8025	13041	13041					0.0839911797708055
GLALLFRLE	9	Unmodified	_GLALLFRLE_					0	0	0			REV__ENST00000377735.7_1_19:46286459-46286786:-|nuORF	REV__ENST00000377735.7_1_19:46286459-46286786:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.314453125	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.78983	1	12813	12813		27.882	0	1	4038100	+		11446	25873	8018	8026	13042	13042					0.10343210236624145
GLALPLKP	8	Unmodified	_GLALPLKP_					0	0	0		ENST00000560168.1_1_19:46268761-46269535:-|nuORF;ENSG00000177045|ENST00000317578|SIX5	ENST00000560168.1_1_19:46268761-46269535:-|nuORF	ENST00000560168.1_1_19:46268761-46269535:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.929443359375	2	404.768189	807.521825	-0.48253	-0.00019531	-0.36943	-0.00014953	-0.85196	-0.00034485	404.7697363652237	47.31	0.15106	47.222	47.153	47.304	-0.087646					6	4	2	0	0	0	0.4196	1	3540	3540		7.6903	0	1	71676			11447	7114	8019	8027	13043	13043					0.1103648211642394
GLALYLIA	8	Unmodified	_GLALYLIA_					0	0	0		ENSG00000099219|ENST00000339450|ERMP1;ENST00000487088.5_1_9:5832547-5832913:-|nuORF;ENST00000214893.9_1_9:5823966-5832826:-|nuORF;ENST00000475005.1_1_9:5812814-5833063:-|nuORF	ENSG00000099219|ENST00000339450|ERMP1	ENSG00000099219|ENST00000339450|ERMP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.25762939453125	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.80127	1	590	590		16.705	0	1	817900			11448	1749	8020	8028	13044	13044					0.08288775879509558
GLAMRVQH	8	Unmodified	_GLAMRVQH_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79156494140625	2	456.247629	910.480705	-0.061918	-2.825E-05	4.2245	0.0019274	4.1626	0.0018992	456.25069968893325	40.276	0.60205	40.228	40.046	40.648	-0.04789					45	22	4	0	0	0	0.4196	1	2520	2520		21.702	4.3374	1	180480	+		11449	21357	8021	8029	13045	13045					0.021883978052983366
GLAPPSVAE	9	Unmodified	_GLAPPSVAE_					0	0	0			REV__ENST00000398341.7_1_21:44000866-44001409:+|nuORF	REV__ENST00000398341.7_1_21:44000866-44001409:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.7276611328125	2	420.726718	839.438883	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.798	1	31.747	31.247	32.247	-0.051031								0	0	0	0.24168	1	1824	1824		65.803	14.468	1		+		11450	26200	8022	8030	13046	13046					0.012741205977590653
GLAQATHLTLR	11	Unmodified	_GLAQATHLTLR_					0	0	0			REV__ENSG00000196547|ENST00000559717|MAN2A2	REV__ENSG00000196547|ENST00000559717|MAN2A2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8667602539062	2	590.843479	1179.67241	-0.64337	-0.00038013	0.87732	0.00051836	0.23395	0.00013823	590.8449040815831	103.66	0.80867	103.66	103.35	104.16	-0.0035706					33	19	3	0	0	0	0.16675	1	11146	11146		40.058	0	1	327760	+		11451	23143	8023	8031	13047	13047					0.08975597037260741
GLARAGKPA	9	Unmodified	_GLARAGKPA_					0	0	0		ENST00000594089.1_1_11:64546591-64546756:+|nuORF	ENST00000594089.1_1_11:64546591-64546756:+|nuORF	ENST00000594089.1_1_11:64546591-64546756:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.75482177734375	2	420.756144	839.497735	0.012717	5.3507E-06	-2.3289	-0.00097989	-2.3162	-0.00097454	420.7550362120359	20.612	1.2168	20.688	19.803	21.02	0.07585					93	60	2	0	0	0	0.7932	1	513	513		18.324	0	1	151820			11452	14315	8024	8032	13048	13048					0.07156641682740883
GLARGVLLVFY	11	Unmodified	_GLARGVLLVFY_					0	0	0			REV__ENSG00000182544|ENST00000329548|MFSD5	REV__ENSG00000182544|ENST00000329548|MFSD5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3617553710938	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.08	1	119.05	118.55	119.55	-0.024033								0	0	0	0.56276	1	13194	13194		15.642	1.5047	1		+		11453	22532	8025	8033	13049	13049					0.11739143707859512
GLARPKPK	8	Unmodified	_GLARPKPK_					0	0	0			REV__ENSG00000101577|ENST00000677752|LPIN2	REV__ENSG00000101577|ENST00000677752|LPIN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.28662109375	2	433.782162	865.549771	-0.97013	-0.00042083	-3.2776	-0.0014218	-4.2477	-0.0018426	433.7815346135111	48.223	3.1132	48.692	48.082	51.195	0.46941					229	76	5	0	0	0	0.4196	1	4807	4807		13.775	0.81615	1	4167000	+		11454	17289	8026	8034	13050	13050					0.11161805096503485
GLARVPGRQRR	11	Unmodified	_GLARVPGRQRR_					0	0	0			REV__ENST00000557373.1_1_14:35343833-35343968:+|nuORF	REV__ENST00000557373.1_1_14:35343833-35343968:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59283447265625	3	422.593566	1264.75887	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.466	1	55.439	54.939	55.939	-0.027279								0	0	0	0.56276	1	5051	5051		29.551	0	1		+		11455	28715	8027	8035	13051	13051					0.13708021382490188
GLASLRKS	8	Unmodified	_GLASLRKS_					0	0	0		ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.8085021972656	2	416.255977	830.497401	1.2436	0.00051764	-0.788	-0.00032801	0.45556	0.00018963	416.25556065281864	18.728	0.5717	18.251	18.03	18.602	-0.47694					22	12	3	0	0	0	0.4196	1	464	464		37.159	20.686	1	181220			11456	5530	8028	8036	13052	13052					0.07537221962888907
GLATTRGR	8	Unmodified	_GLATTRGR_					0	0	0		ENST00000456754.6_1_X:47444724-47445414:+|nuORF	ENST00000456754.6_1_X:47444724-47445414:+|nuORF	ENST00000456754.6_1_X:47444724-47445414:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7365417480469	2	416.243401	830.472249	1.2194	0.00050757	1.8972	0.0007897	3.1166	0.0012973	416.2444207389458	34.738	0.28369	34.948	34.769	35.053	0.21003					9	6	2	0	0	0	0.4196	1	2588	2588		30.504	3.7075	1	234030			11457	11970	8029	8037	13053	13053					0.05023167160322828
GLAVLLMV	8	Unmodified	_GLAVLLMV_					0	0	0			REV__ENSG00000080293|ENST00000019103|SCTR	REV__ENSG00000080293|ENST00000019103|SCTR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.7394714355469	2	408.2566	814.498647	-1.04	-0.00042458	-3.3503	-0.0013678	-4.3903	-0.0017924	408.2556417507662	37.5	0.1786	37.449	37.317	37.495	-0.050373					5	3	2	0	0	0	0.4196	1	2562	2562		33.493	23.308	1	10644	+		11458	16799	8030	8038	13054	13054					0.08397720007440057
GLAVVLLLLL	10	Unmodified	_GLAVVLLLLL_					0	0	0			REV__ENSG00000146648|ENST00000275493|EGFR	REV__ENSG00000146648|ENST00000275493|EGFR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.861083984375	2	512.362453	1022.71035	-0.052808	-2.7057E-05	-2.2805	-0.0011684	-2.3333	-0.0011955	512.3611914628581	74.266	1.3455	74.309	74.086	75.431	0.0429					113	47	3	0	0	0	0.85108	1	7183	7183		19.36	1.995	1	281850	+		11459	20025	8031	8039	13055	13055					0.19990714970060708
GLAWIDVPK	9	Unmodified	_GLAWIDVPK_					0	0	0			REV__nc|ENSG00000273345|Q8IVW4-2|CDKL3	REV__nc|ENSG00000273345|Q8IVW4-2|CDKL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.7856140136719	2	499.78711	997.559667	0.19483	9.7372E-05	-4.1016	-0.0020499	-3.9068	-0.0019526	499.7848899296981	22.078	1.1524	21.635	21.19	22.342	-0.44324					54	25	4	0	0	0	0.25483	1	862	862		68.787	6.6794	1	243250	+		11460	16114	8032	8040	13056	13056					0.06078948311221666
GLAWSLPLR	9	Unmodified	_GLAWSLPLR_					0	0	0			REV__nc|ENSG00000132470|P16144-3|ITGB4	REV__nc|ENSG00000132470|P16144-3|ITGB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.79998779296875	2	506.800552	1011.58655	0.18992	9.6251E-05	0.88652	0.00044929	1.0764	0.00054554	506.80099089303076	46.969	1.4152	46.955	46.233	47.648	-0.013817					58	38	2	0	0	0	0.7932	1	3727	3727		26.693	0	1	254450	+		11461	29845	8033	8041	13057	13057					0.08122056922422871
GLCCPPGSH	9	Unmodified	_GLCCPPGSH_					0	0	0			REV__nc|ENSG00000144857|Q9BWV1|BOC	REV__nc|ENSG00000144857|Q9BWV1|BOC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7789001464844	2	435.683473	869.352393	0.509	0.00022176	3.7599	0.0016381	4.2689	0.0018599	435.6870407784754	62.236	0.17733	62.266	62.22	62.397	0.029575					14	8	2	0	0	0	0.20789	1	5815	5815		12.959	0	1	59582	+		11462	29908	8034	8042	13058	13058					-0.08750905500096451
GLCKNFLSN	9	Unmodified	_GLCKNFLSN_					0	0	0		L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|5|1|sense	L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|5|1|sense	L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.25067138671875	2	498.252577	994.490601	-1.5013	-0.00074805	-2.978	-0.0014838	-4.4793	-0.0022318	498.2515159511958	84.873	2.6908	85.023	83.276	85.967	0.14951					140	61	3	0	0	0	0.76255	1	8154	8154		35.618	0.46626	1	117250			11463	14536	8035	8043	13059	13059					-0.006864589799874921
GLDDFGDI	8	Unmodified	_GLDDFGDI_					0	0	0			REV__ENSG00000171487|ENST00000390649|NLRP5	REV__ENSG00000171487|ENST00000390649|NLRP5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.1795654296875	2	426.192708	850.370863	1.9343	0.0008244	-4.4634	-0.0019023	-2.529	-0.0010779	426.1906448083031	99.167	0.94817	99.53	99.094	100.04	0.36292					28	23	2	0	0	0	0.4196	1	11944	11944		18.324	0	1	179320	+		11464	21735	8036	8044	13060	13060					-0.060307490528884955
GLDGVHCVPT	10	Unmodified	_GLDGVHCVPT_					0	0	0		ENSG00000166664|ENST00000299847|CHRFAM7A;ENSG00000175344|ENST00000306901|CHRNA7;nc|ENSG00000175344|P36544-2|CHRNA7	ENSG00000166664|ENST00000299847|CHRFAM7A	ENSG00000166664|ENST00000299847|CHRFAM7A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.2428283691406	2	499.242209	996.469866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.931	1	20.999	20.499	21.499	0.068251								0	0	0	0.45132	1	524	524		32.812	0.85756	1				11465	6218	8037	8045	13061	13061					-0.02851049359640001
GLDKSFKKAL	10	Unmodified	_GLDKSFKKAL_					0	0	0			REV__ENSG00000257315|ENST00000550078|ZBED6	REV__ENSG00000257315|ENST00000550078|ZBED6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8307495117188	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.80179	1	9224	9224		39.253	5.0803	1	6029400	+		11466	23918	8038	8046	13062	13062					0.10094577919812764
GLDLFHEH	8	Unmodified	_GLDLFHEH_					0	0	0			REV__ENSG00000146247|ENST00000275034|PHIP	REV__ENSG00000146247|ENST00000275034|PHIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.2362365722656	2	484.235242	966.45593	1.1008	0.00053307	0.70168	0.00033978	1.8025	0.00087285	484.2355889219141	87.173	0.81998	87.099	86.646	87.466	-0.073997					58	18	4	0	0	0	0.91005	1	8999	8999		42.474	1.9018	1	2636900	+		11467	20000	8039	8047	13063	13063					-0.028639587964335078
GLDPHAIPGR	10	Unmodified	_GLDPHAIPGR_					0	0	0		ENST00000473964.5_1_1:2433496-2434522:+|nuORF;nc|ENSG00000149527|O75038-5|PLCH2;ENST00000343889.8_1_1:2411150-2434522:+|nuORF;nc|ENSG00000149527|O75038-4|PLCH2;nc|ENSG00000149527|O75038-2|PLCH2	ENST00000473964.5_1_1:2433496-2434522:+|nuORF	ENST00000473964.5_1_1:2433496-2434522:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3142700195312	2	516.78289	1031.55123	1.922	0.00099325	1.1886	0.00061424	3.1106	0.0016075	516.783511064976	99.466	0.83314	99.828	99.599	100.43	0.36292					32	20	2	0	0	0	0.37624	1	12084	12084		26.693	4.733	1	194210			11468	10283	8040	8048	13064	13064					0.03671394394609706
GLDRLAKLLQL	11	Unmodified	_GLDRLAKLLQL_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9328308105469	3	413.930962	1238.77106	0.21387	8.8526E-05	4.0224	0.001665	4.2363	0.0017535	413.93255960283653	42.979	1.989	43.044	42.116	44.105	0.065033					113	52	3	0	0	0	0.73621	1	2930	2930		25.126	3.4402	1	432840	+		11469	23574	8041	8049	13065	13065					0.1612220028232514
GLDVIETP	8	Unmodified	_GLDVIETP_					0	0	0		nc|ENSG00000102290|Q9BZA7-7|PCDH11X;ENSG00000099715|ENST00000698851|PCDH11Y;nc|ENSG00000099715|Q9BZA8|PCDH11Y;nc|ENSG00000102290|Q9BZA7-8|PCDH11X;chrX:92387933-92618264|17|10.29|0.21|5.6|+|ENST00000406881|PCDH11X,PCDH11X;nc|ENSG00000102290|Q9BZA7-3|PCDH11X;nc|ENSG00000102290|Q9BZA7-4|PCDH11X;nc|ENSG00000102290|Q9BZA7-5|PCDH11X;nc|ENSG00000102290|Q9BZA7-6|PCDH11X;nc|ENSG00000102290|Q9BZA7-2|PCDH11X;chrX:91836044-91876781|14|26.86|0.31|6.45|+|ENST00000504220|PCDH11X,PCDH11X;chrX:91879273-92201375|15|14.67|0.42|5.12|+|ENST00000504220|PCDH11X,PCDH11X;nc|ENSG00000099715|Q9BZA8-4|PCDH11Y;nc|ENSG00000099715|Q9BZA8-2|PCDH11Y;nc|ENSG00000099715|Q9BZA8-3|PCDH11Y;ENST00000361724.3_1_X:91090458-91134302:+|nuORF;ENSG00000102290|ENST00000682573|PCDH11X	nc|ENSG00000102290|Q9BZA7-7|PCDH11X	nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2286682128906	2	422.226551	842.438549	0.34219	0.00014448	3.0399	0.0012835	3.3821	0.001428	422.22773189894326	57.189	1.8785	57.295	56.929	58.807	0.1055					192	88	3	0	0	0	0.92457	1	4863	4863		47.916	5.4411	1	718200			11470	555	8042	8050	13066	13066					0.011027008779137759
GLEAIQRTPK	10	Unmodified	_GLEAIQRTPK_					0	0	0		ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	ENSG00000166710|ENST00000648006|B2M	ENSG00000166710|ENST00000648006|B2M	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.8245849609375	2	556.824755	1111.63496	-0.060904	-3.3913E-05	-0.14284	-7.9539E-05	-0.20375	-0.00011345	556.8245281840843	32.223	0.60378	32.35	32.03	32.634	0.12643					32	13	3	0	0	0	7.9362E-05	3	2223	2223;2235;2248		146.79	50.97	1	834350			11471	6222	8043	8051	13067;13068;13069	13067					0.08360505771634053
GLEAIQRTPK	10	Unmodified	_GLEAIQRTPK_					0	0	0		ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	ENSG00000166710|ENST00000648006|B2M	ENSG00000166710|ENST00000648006|B2M	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.8242797851562	2	556.824755	1111.63496	0.53958	0.00030045	-0.74379	-0.00041416	-0.20421	-0.00011371	556.8242165927959	32.133	0.81672	32.24	31.888	32.704	0.10707					39	18	3	0	0	0	0.016414	2	2248	2237;2248		125.71	48.395	1	892970			11472	6222	8043	8051	13070;13071	13071					0.08360505771634053
GLEAPRRA	8	Unmodified	_GLEAPRRA_					0	0	0			REV__ENST00000427379.2_1_10:99589401-99609531:-|nuORF	REV__ENST00000427379.2_1_10:99589401-99609531:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25146484375	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.84341	1	7602	7602		24.203	1.1603	1	3370400	+		11473	26560	8044	8052	13072	13072					0.048394536773685104
GLEDYEAAS	9	Unmodified	_GLEDYEAAS_					0	0	0			REV__ENST00000401504.2_1_6:147728373-147728715:+|nuORF	REV__ENST00000401504.2_1_6:147728373-147728715:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.7037658691406	2	477.70618	953.397806	0.25943	0.00012393	-4.326	-0.0020666	-4.0666	-0.0019426	477.7038880013328	56.386	0.42918	56.783	56.556	56.985	0.39672					20	9	3	0	0	0	0.78983	1	5829	5829		27.882	1.1893	1	1923800	+		11474	26257	8045	8053	13073	13073					-0.08075685232381602
GLEGVIEWVEN	11	Unmodified	_GLEGVIEWVEN_					0	0	0			REV__ENSG00000072786|ENST00000176763|STK10	REV__ENSG00000072786|ENST00000176763|STK10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	622.813720703125	2	622.81151	1243.60847	-0.30607	-0.00019063	4.0862	0.002545	3.7802	0.0023543	622.8139596261243	87.911	0.96681	88.375	88.06	89.027	0.46312					59	23	4	0	0	0	0.638	1	10376	10376		40.058	2.2467	1	1677100	+		11475	16656	8046	8054	13074	13074					-0.0035922791032589885
GLEGVIEWVEN	11	Unmodified	_GLEGVIEWVEN_					0	0	0			REV__ENSG00000072786|ENST00000176763|STK10	REV__ENSG00000072786|ENST00000176763|STK10	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	622.81151	1243.60847	0.7619	0.00047452	3.2004	0.0019932	3.9623	0.0024678	622.81338251894	87.804	0.77916	88.253	87.934	88.713	0.44893	-0.060943	-0.00049403	NaN	40.058	54	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1509600	+		11476	16656	8046	8054							-0.0035922791032589885
GLEMTAGF	8	Unmodified	_GLEMTAGF_					0	0	0		ENSG00000186603|ENST00000334815|HPDL	ENSG00000186603|ENST00000334815|HPDL	ENSG00000186603|ENST00000334815|HPDL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.194580078125	2	413.194196	824.37384	-1.8226	-0.00075309	-0.058306	-2.4092E-05	-1.8809	-0.00077719	413.1944957204684	85.398	2.5334	85.557	84.502	87.035	0.15851					179	58	5	0	0	0	0.81548	2	8315	8315;8327		35.201	5.3592	1	1598500			11477	7806	8047	8055	13075;13076	13075					-0.04537197199726961
GLEPLLDLL	9	Unmodified	_GLEPLLDLL_					0	0	0		nc|ENSG00000104936|Q09013-12|DMPK;nc|ENSG00000104936|Q09013-10|DMPK;nc|ENSG00000104936|Q09013-11|DMPK;nc|ENSG00000104936|Q09013-15|DMPK;ENSG00000104936|ENST00000291270|DMPK;nc|ENSG00000104936|Q09013-16|DMPK	nc|ENSG00000104936|Q09013-12|DMPK	nc|ENSG00000104936|Q09013-12|DMPK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7966613769531	2	491.794601	981.574648	0.38495	0.00018932	2.0164	0.00099166	2.4014	0.001181	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.7932	1	4680	4680		24.203	0	1	2075300			11478	2169	8048	8056	13077	13077					0.08312395388577443
GLESGASGRGS	11	Unmodified	_GLESGASGRGS_					0	0	0		ENSG00000126705|ENST00000673934|AHDC1	ENSG00000126705|ENST00000673934|AHDC1	ENSG00000126705|ENST00000673934|AHDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.2362976074219	2	489.23597	976.457387	-0.71864	-0.00035159	1.6081	0.00078672	0.88941	0.00043513	489.2367667655941	86.159	1.8924	86.606	85.945	87.837	0.44736					116	45	5	0	0	0	0.51007	1	10189	10189		51.193	3.2771	1	3138400			11479	3460	8049	8057	13078	13078					-0.03178369498311895
GLEWVVAP	8	Unmodified	_GLEWVVAP_					0	0	0		ENST00000469076.5_1_1:19638824-19651237:+|nuORF	ENST00000469076.5_1_1:19638824-19651237:+|nuORF	ENST00000469076.5_1_1:19638824-19651237:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.779052734375	2	435.739628	869.464704	-1.0102	-0.00044017	-3.6224	-0.0015784	-4.6326	-0.0020186	435.73786030230906	39.511	0.7733	40.066	39.79	40.563	0.55449					33	17	3	0	0	0	0.4196	1	3379	3379		20.482	0	1	437840			11480	12188	8050	8058	13079	13079					0.02475014840035783
GLFALPFGR	9	Unmodified	_GLFALPFGR_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.2817687988281	2	489.281995	976.549437	-0.14462	-7.0759E-05	0.51291	0.00025096	0.36829	0.0001802	489.28203696982223	80.119	0.6759	80.646	80.359	81.035	0.52676					37	15	3	0	0	0	0.43338	1	9235	9235		55.504	0	1	660600			11481	5245	8051	8059	13080	13080					0.060223853766501634
GLFALPFGR	9	Unmodified	_GLFALPFGR_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	489.281995	976.549437	-0.49901	-0.00024416	0.80595	0.00039434	0.30694	0.00015018	489.2822820180602	80.198	0.717	80.614	80.338	81.055	0.41621	-0.015997	0.0001347	NaN	55.504	32	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	572080			11482	5245	8051	8059							0.060223853766501634
GLFGLVQVRR	10	Unmodified	_GLFGLVQVRR_					0	0	0			REV__ENST00000261275.4_2_15:29413103-29413565:-|nuORF	REV__ENST00000261275.4_2_15:29413103-29413565:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.3499145507812	2	572.851107	1143.68766	1.0371	0.00059409	-4.1675	-0.0023874	-3.1304	-0.0017933	572.8485650257212	17.146	0.38702	17.064	16.857	17.244	-0.0821					28	15	3	0	0	0	0.85934	1	202	202		35.618	2.8059	1	130280	+		11483	24384	8052	8060	13081	13081					0.12156508625139395
GLFGLWAPQA	10	Unmodified	_GLFGLWAPQA_					0	0	0			REV__nc|ENSG00000089472|Q9BQS7-2|HEPH	REV__nc|ENSG00000089472|Q9BQS7-2|HEPH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.281494140625	2	530.284734	1058.55492	-1.1085	-0.00058784	-3.8123	-0.0020216	-4.9208	-0.0026094	530.2825683689133	76.473	0.62762	76.562	76.188	76.816	0.089363					43	23	2	0	0	0	0.64457	1	7122	7122		47.657	4.7931	1	105330	+		11484	16970	8053	8061	13082	13082					0.027980641684507646
GLFGVIVAIL	10	Unmodified	_GLFGVIVAIL_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29052734375	2	501.323328	1000.6321	-0.064959	-3.2565E-05	-0.60698	-0.00030429	-0.67194	-0.00033686	501.3233650360488	87.321	0.26029	87.389	87.184	87.444	0.067711					7	5	2	0	0	0	0.37624	1	8823	8823		19.36	1.0979	1	39581			11485	2976	8054	8062	13083	13083					0.13181282384800852
GLFILVRLKFL	11	Unmodified	_GLFILVRLKFL_					0	0	0			REV__ENST00000527855.1_1_3:113697695-113720591:-|nuORF	REV__ENST00000527855.1_1_3:113697695-113720591:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.2923278808594	3	440.291831	1317.85366	0.36311	0.00015988	0.85767	0.00037763	1.2208	0.0005375	440.2919928155031	58.022	1.2392	58.056	57.534	58.773	0.033905					105	37	4	0	0	0	0.80593	1	5266	5266		10.104	1.3046	1	302530	+		11486	28236	8055	8063	13084	13084					0.20745142081091217
GLFPGAPKGAT	11	Unmodified	_GLFPGAPKGAT_					0	0	0		ENSG00000179588|ENST00000319555|ZFPM1	ENSG00000179588|ENST00000319555|ZFPM1	ENSG00000179588|ENST00000319555|ZFPM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2795715332031	2	508.282192	1014.54983	-0.88176	-0.00044818	-2.9285	-0.0014885	-3.8102	-0.0019367	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.53361	1	8637	8637		49.536	7.198	1	1261800			11487	7279	8056	8064	13085	13085					0.04313760305853975
GLFPRKPAP	9	Unmodified	_GLFPRKPAP_					0	0	0		nc|ENSG00000127152|Q9C0K0-2|BCL11B;ENSG00000127152|ENST00000357195|BCL11B	nc|ENSG00000127152|Q9C0K0-2|BCL11B	nc|ENSG00000127152|Q9C0K0-2|BCL11B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7946472167969	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.7932	1	3442	3442		23.042	0	1	2891800			11488	3486	8057	8065	13086	13086					0.08446074267988024
GLFQGKTPLRK	11	Unmodified	_GLFQGKTPLRK_					0	0	0		ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2;chr20:31781046-31782249|55|21.85|0.14|7.24|+|ENST00000340513|TPX2,TPX2;chr20:31778984-31780939|56|14.46|0.13|6.78|+|ENST00000340513|TPX2,TPX2	ENSG00000088325|ENST00000300403|TPX2	ENSG00000088325|ENST00000300403|TPX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.5890808105469	3	415.587307	1243.74009	1.1825	0.00049144	-0.57378	-0.00023846	0.60873	0.00025298	415.58682044538546	33.506	0.58651	33.675	33.356	33.943	0.16971					40	13	4	0	0	0	0.66858	1	2434	2434		36.528	8.4464	1	838100			11489	359	8058	8066	13087	13087					0.12797046968057657
GLFRGLLP	8	Unmodified	_GLFRGLLP_					0	0	0			REV__ENSG00000142959|ENST00000372207|BEST4	REV__ENSG00000142959|ENST00000372207|BEST4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7723693847656	2	436.771263	871.527973	1.7437	0.00076159	3.2678	0.0014273	5.0114	0.0021889	436.7728952540282	27.595	1.1661	27.572	27.227	28.393	-0.023556					56	27	3	0	0	0	0.86791	1	1260	1260		28.254	1.4582	1	71535	+		11490	19764	8059	8067	13088	13088					0.08707000347953908
GLGAEAHPPE	10	Unmodified	_GLGAEAHPPE_					0	0	0			REV__nc|ENSG00000177398|Q5DID0-3|UMODL1	REV__nc|ENSG00000177398|Q5DID0-3|UMODL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.236328125	2	489.237981	976.461409	-0.72549	-0.00035494	-2.4583	-0.0012027	-3.1838	-0.0015576	489.23682827265793	62.903	2.2218	63.017	62.721	64.943	0.11388					298	98	5	0	0	0	0.86305	1	5592	5592		31.955	4.0726	1	3506900	+		11491	22200	8060	8068	13089	13089					-0.027762800046275515
GLGAEAHPPE	10	Unmodified	_GLGAEAHPPE_					0	0	0			REV__nc|ENSG00000177398|Q5DID0-3|UMODL1	REV__nc|ENSG00000177398|Q5DID0-3|UMODL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.23675537109375	2	489.237981	976.461409	-0.77305	-0.00037821	-2.5786	-0.0012615	-3.3516	-0.0016398	489.23682963313604	63.081	1.9408	63.104	62.828	64.768	0.022984					241	80	5	0	0	0	0.71042	2	5592	5577;5592		44.117	13.613	1	3852300	+		11492	22200	8060	8068	13090;13091	13091					-0.027762800046275515
GLGALIFAL	9	Unmodified	_GLGALIFAL_					0	0	0			REV__ENST00000482171.5_1_2:130912058-130912505:-|nuORF	REV__ENST00000482171.5_1_2:130912058-130912505:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.771240234375	2	437.773471	873.53239	-0.99724	-0.00043656	-4.0891	-0.0017901	-5.0864	-0.0022267	437.77179407937126	38.831	0.76415	39.173	38.896	39.661	0.34187					66	17	5	0	0	0	0.78292	1	3253	3253		29.842	1.5873	1	15326000	+		11493	27463	8061	8069	13092	13092					0.09056464770844741
GLGGARTPA	9	Unmodified	_GLGGARTPA_					0	0	0		ENST00000572285.5_1_17:7132813-7133230:-|nuORF	ENST00000572285.5_1_17:7132813-7133230:-|nuORF	ENST00000572285.5_1_17:7132813-7133230:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.2260437011719	2	400.224677	798.434801	0.19039	7.6198E-05	2.8018	0.0011213	2.9921	0.0011975	400.2256905214053	40.131	1.7936	40.212	40.004	41.798	0.081345					102	56	2	0	0	0	0.77546	1	2524	2524		31.955	0	1	1154400			11494	14010	8062	8070	13093	13093					0.027520758947161994
GLGGGLIPGLN	11	Unmodified	_GLGGGLIPGLN_					0	0	0		ENST00000555759.1_1_14:95912279-95916550:-|nuORF	ENST00000555759.1_1_14:95912279-95916550:-|nuORF	ENST00000555759.1_1_14:95912279-95916550:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.7177734375	2	484.282192	966.549831	0.75866	0.00036741	4.0139	0.0019439	4.7725	0.0023113	484.2833269843656	97.475	0.76894	97.635	97.379	98.148	0.16074					25	17	2	0	0	0	0.17529	1	10151	10151		26.693	0	1	54167			11495	13735	8063	8071	13094	13094					0.06521760305849966
GLGGRIRN	8	Unmodified	_GLGGRIRN_					0	0	0			REV__ENST00000305877.12_2_22:23658764-23658902:+|nuORF	REV__ENST00000305877.12_2_22:23658764-23658902:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7557373046875	2	421.751393	841.488233	2.0737	0.00087458	-1.681	-0.00070895	0.39271	0.00016563	421.75059831811666	74.567	1.1366	74.612	73.884	75.021	0.04509					66	40	2	0	0	0	0.86791	1	7171	7171		28.254	1.4582	1	116630	+		11496	24823	8064	8072	13095	13095					0.06114873397223164
GLGGSLALIP	10	Unmodified	_GLGGSLALIP_					0	0	0			REV__nc|ENSG00000277399|Q6PRD1|GPR179	REV__nc|ENSG00000277399|Q6PRD1|GPR179	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2596740722656	2	449.273835	896.533118	-0.074537	-3.3488E-05	0.59636	0.00026793	0.52182	0.00023444	449.2741219382973	67.633	0.46504	68.182	68.028	68.493	0.54819					15	10	2	0	0	0	0.37624	1	7469	7469		12.207	0	1	124920	+		11497	24024	8065	8073	13096	13096					0.08071259419898524
GLGGSLLLLL	10	Unmodified	_GLGGSLLLLL_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3086853027344	2	478.312961	954.611368	-1.2214	-0.00058419	4.0202	0.0019229	2.7988	0.0013387	478.31457818130076	48.19	0.63653	48.188	48.022	48.659	-0.002449					21	14	2	0	0	0	0.37624	1	3980	3980		10.866	4.13	1	33656	+		11498	23147	8066	8074	13097	13097					0.13224692005132965
GLGGSSMSTH	10	Unmodified	_GLGGSSMSTH_					0	0	0		ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.23321533203125	2	467.208366	932.40218	0.14634	6.837E-05	-2.3052	-0.001077	-2.1588	-0.0010086	467.2073899734988	66.903	0.33345	67.288	66.992	67.326	0.38515					12	9	2	0	0	0	0.37624	1	7319	7319		42.396	0	1	71416			11499	3466	8067	8075	13098	13098					-0.06672499290436917
GLGIRLPLEL	10	Unmodified	_GLGIRLPLEL_					0	0	0		ENSG00000106128|ENST00000326139|GHRHR	ENSG00000106128|ENST00000326139|GHRHR	ENSG00000106128|ENST00000326139|GHRHR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.8416137695312	2	540.842416	1079.67028	0.31832	0.00017216	-0.88585	-0.00047911	-0.56753	-0.00030695	540.8422303734262	74.893	0.53185	74.939	74.705	75.237	0.04509					26	14	2	0	0	0	0.8608	1	7266	7266		34.173	0	1	117520			11500	2283	8068	8076	13099	13099					0.13363168299474637
GLGIWTLID	9	Unmodified	_GLGIWTLID_					0	0	0		nc|ENSG00000184277|Q9BRN9-2|TM2D3;ENSG00000184277|ENST00000333202|TM2D3	nc|ENSG00000184277|Q9BRN9-2|TM2D3	nc|ENSG00000184277|Q9BRN9-2|TM2D3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7400207519531	2	494.279118	986.543683	0.062873	3.1077E-05	-3.9304	-0.0019427	-3.8675	-0.0019116	494.27713009935286	33.419	0.5013	33.589	33.442	33.943	0.16971					14	11	2	0	0	0	0.20789	1	2441	2441		47.916	7.343	1	118580			11501	7597	8069	8077	13100	13100					0.049872420743326984
GLGLLLVK	8	Unmodified	_GLGLLLVK_					0	0	0			REV__ENST00000479866.5_1_12:48143124-48152369:-|nuORF	REV__ENST00000479866.5_1_12:48143124-48152369:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78509521484375	2	406.783839	811.553125	-0.12228	-4.9742E-05	4.0703	0.0016557	3.948	0.001606	406.7853695051589	35.638	4.6571	35.626	35.208	39.865	-0.012199					169	106	4	0	0	0	0.82464	1	2223	2223		21.702	7.0382	1	683900	+		11502	27406	8070	8078	13101	13101					0.13981055150509292
GLGLLLVK	8	Unmodified	_GLGLLLVK_					0	0	0			REV__ENST00000479866.5_1_12:48143124-48152369:-|nuORF	REV__ENST00000479866.5_1_12:48143124-48152369:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78521728515625	2	406.783839	811.553125	0.13384	5.4446E-05	3.7055	0.0015073	3.8393	0.0015618	406.7852062914835	29.439	1.7033	29.41	28.91	30.613	-0.029207					106	38	4	0	0	0	0.86791	1	1862	1862		28.254	1.4582	1	2367100	+		11503	27406	8070	8078	13102	13102					0.13981055150509292
GLGPLSWAAS	10	Unmodified	_GLGPLSWAAS_					0	0	0			REV__nc|ENSG00000163701|Q8NFR9-3|IL17RE	REV__nc|ENSG00000163701|Q8NFR9-3|IL17RE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.7516784667969	2	479.753267	957.491981	0.1967	9.4366E-05	-3.8576	-0.0018507	-3.6609	-0.0017563	479.7511384255675	31.142	0.66008	31.16	30.879	31.539	0.01836					33	16	3	0	0	0	0.50394	1	1664	1664		55.504	4.1688	1	158910	+		11504	20960	8071	8079	13103	13103					0.011534983804153853
GLGPQVEL	8	Unmodified	_GLGPQVEL_					0	0	0		nc|ENSG00000196498|Q9Y618-5|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;ENSG00000196498|ENST00000405201|NCOR2	nc|ENSG00000196498|Q9Y618-5|NCOR2	nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.73016357421875	2	406.729261	811.443968	-1.8366	-0.00074698	-0.93352	-0.00037969	-2.7701	-0.0011267	406.7287979203731	76.234	2.0799	76.359	74.725	76.805	0.12485					97	60	2	0	0	0	0.86288	1	7111	7111		26.796	1.3459	1	145690			11505	8064	8072	8080	13104	13104					0.03070424460383947
GLGPRKKG	8	Unmodified	_GLGPRKKG_					0	0	0			REV__ENST00000263097.8_1_19:1037929-1038361:+|nuORF	REV__ENST00000263097.8_1_19:1037929-1038361:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.89898681640625	2	406.758687	811.502821	0.39179	0.00015937	-1.3364	-0.0005436	-0.94463	-0.00038424	406.7582654396933	62.942	0.51815	63.065	62.614	63.133	0.12253					30	23	2	0	0	0	0.4196	1	5504	5504		8.8223	0.59103	1	51285	+		11506	24439	8073	8081	13105	13105					0.08952945545377133
GLGQGKLPAG	10	Unmodified	_GLGQGKLPAG_					0	0	0			REV__ENSG00000227507|ENST00000429299|LTB	REV__ENSG00000227507|ENST00000429299|LTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.26104736328125	2	449.261259	896.507966	-1.2373	-0.00055589	-0.66295	-0.00029784	-1.9003	-0.00085373	449.2607756731413	72.678	0.71947	72.758	72.438	73.158	0.080032					44	25	2	0	0	0	0.85934	1	6639	6639		35.618	2.1027	1	208410	+		11507	23747	8074	8082	13106	13106					0.055572046173210765
GLGRKVRA	8	Unmodified	_GLGRKVRA_					0	0	0			REV__ENST00000556095.5_1_14:96830043-96830214:+|nuORF	REV__ENST00000556095.5_1_14:96830043-96830214:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2615051269531	2	428.777411	855.540269	-1.8476	-0.00079219	-1.4505	-0.00062195	-3.2981	-0.0014141	428.7788235337526	90.251	0.2536	90.427	90.257	90.511	0.17579					6	5	2	0	0	0	0.4196	1	8999	8999		8.2313	0.54101	1	28553	+		11508	28695	8075	8083	13107	13107					0.1067203681097908
GLGRPSSRF	9	Unmodified	_GLGRPSSRF_					0	0	0		ENST00000366769.7_1_1:227505620-227505818:-|nuORF	ENST00000366769.7_1_1:227505620-227505818:-|nuORF	ENST00000366769.7_1_1:227505620-227505818:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7713317871094	2	488.769783	975.525013	-0.62735	-0.00030663	3.4462	0.0016844	2.8189	0.0013778	488.7712933583105	85.931	0.90309	86.379	85.986	86.889	0.44736					46	21	3	0	0	0	0.71772	1	10082	10082		39.253	0	1	760770			11509	10519	8076	8084	13108	13108					0.03627125223135863
GLGRRKIR	8	Unmodified	_GLGRRKIR_					0	0	0			REV__ENST00000544200.5_1_12:6942746-6942943:+|nuORF	REV__ENST00000544200.5_1_12:6942746-6942943:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.313232421875	2	478.317235	954.619916	-1.8008	-0.00086135	-4.2619	-0.0020385	-6.0627	-0.0028999	478.3150553405579	36.705	0.5735	36.705	36.293	36.867	0					27	12	3	0	0	0	0.85277	1	2136	2136		25.45	12.491	1	88940	+		11510	28511	8077	8085	13109	13109					0.14079103484982625
GLGTDSHL	8	Unmodified	_GLGTDSHL_					0	0	0		nc|ENSG00000186635|Q96P48-5|ARAP1;nc|ENSG00000186635|Q96P48-7|ARAP1;nc|ENSG00000186635|Q96P48-2|ARAP1;nc|ENSG00000186635|Q96P48-4|ARAP1;nc|ENSG00000186635|Q96P48-1|ARAP1;nc|ENSG00000186635|Q96P48-3|ARAP1;ENSG00000186635|ENST00000393609|ARAP1;ENST00000544958.5_1_11:72404190-72406109:-|nuORF;ENST00000465814.5_1_11:72396711-72407721:-|nuORF	nc|ENSG00000186635|Q96P48-5|ARAP1	nc|ENSG00000186635|Q96P48-5|ARAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.20050048828125	2	400.200867	798.387182	-1.2405	-0.00049646	-2.0317	-0.00081307	-3.2722	-0.0013095	400.201810521261	68.411	1.2277	68.471	68.02	69.248	0.059288					82	51	3	0	0	0	0.92176	1	6119	6119		46.766	0.81448	1	208600			11511	7808	8078	8086	13110	13110					-0.02007623096142197
GLGTHRVK	8	Unmodified	_GLGTHRVK_					0	0	0		ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	434.261594	866.508634	-0.36769	-0.00015968	-4.0117	-0.0017421	-4.3794	-0.0019018	434.26050747211053	38.483	0.95392	39.006	38.672	39.626	0.52235					41	22	3	0	0	0	0.4196	1	3146	3146		25.45	0	1	184870			11512	6887	8079	8087	13111	13111					0.07004044057032388
GLGTVVGLVNK	11	Unmodified	_GLGTVVGLVNK_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.8236083984375	2	528.824224	1055.63389	0.25112	0.0001328	-0.7401	-0.00039139	-0.48898	-0.00025858	528.8238034559284	30.461	0.56774	30.465	30.185	30.753	0.0037212					25	12	3	0	0	0	0.5603	1	2015	2015		47.657	0	1	230460			11513	2924	8080	8088	13112	13112					0.10830291402749026
GLGTVVGLVNK	11	Unmodified	_GLGTVVGLVNK_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	528.824224	1055.63389	-0.47201	-0.00024961	0.31327	0.00016566	-0.15874	-8.3945E-05	528.8242555417489	30.319	0.57461	30.348	30.052	30.627	0.028618	-0.058483	0.00048312	NaN	47.657	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161000			11514	2924	8080	8088							0.10830291402749026
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.301025390625	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.86786	1	1981	1981		26.796	0	1	1057300	+		11515	19720	8081	8089	13113	13113					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3014831542969	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.85976	1	2154	2154		35.201	0	1	1715600	+		11516	19720	8081	8089	13114	13114					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3010559082031	2	456.299853	910.585153	-0.68927	-0.00031451	3.5345	0.0016128	2.8453	0.0012983	456.30128778001557	35.219	1.6098	35.163	34.768	36.378	-0.056385					101	36	5	0	0	0	0.85976	2	2258	2258;2268		35.201	6.9464	1	710350	+		11517	19720	8081	8089	13115;13116	13115					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7920837402344	2	456.299853	910.585153	-1.0845	-0.00049484	2.3764	0.0010844	1.2919	0.00058952	456.3007985571921	43.194	1.64	43.158	42.714	44.354	-0.03582					100	38	4	0	0	0	0.37624	1	3311	3311		44.531	15.382	1	671500	+		11518	19720	8081	8089	13117	13117					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30133056640625	2	456.299853	910.585153	-0.75416	-0.00034412	3.5877	0.0016371	2.8336	0.001293	456.3012900851617	35.065	1.7041	35.071	34.727	36.431	0.0063934					112	39	4	0	0	0	0.70264	1	2226	2226		44.531	0.90502	1	634200	+		11519	19720	8081	8089	13118	13118					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.2998352050781	2	456.299853	910.585153	-0.89508	-0.00040842	2.0642	0.00094188	1.1691	0.00053346	456.3006095268826	41.695	2.3347	41.699	40.562	42.897	0.0034142					109	59	2	0	0	0	0.86786	1	2952	2952		26.796	4.8362	1	272790	+		11520	19720	8081	8089	13119	13119					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30084228515625	2	456.299853	910.585153	-0.23513	-0.00010729	2.1872	0.000998	1.952	0.00089071	456.3007121817001	45.145	1.6994	45.141	44.498	46.198	-0.0041618					86	39	3	0	0	0	0.86786	1	3587	3587		26.796	0	1	438290	+		11521	19720	8081	8089	13120	13120					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3011779785156	2	456.299853	910.585153	-1.267	-0.00057813	4.2907	0.0019578	3.0237	0.0013797	456.3016565043114	33.346	1.5471	33.392	33.095	34.642	0.045853					160	67	4	0	0	0	0.85108	1	1643	1643		19.36	0	1	1558600	+		11522	19720	8081	8089	13121	13121					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3011169433594	2	456.299853	910.585153	0.16746	7.6412E-05	2.7809	0.0012689	2.9484	0.0013454	456.30098393638264	34.91	1.4474	35.016	34.575	36.022	0.10603					127	53	3	0	0	0	0.70264	3	1824	1807;1824;1845		44.531	5.7249	1	751300	+		11523	19720	8081	8089	13122;13123;13124	13123					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3011474609375	2	456.299853	910.585153	0.20856	9.5165E-05	2.1915	0.00099997	2.4	0.0010951	456.3006822379284	39.411	1.6419	39.499	38.918	40.56	0.088371					97	45	3	0	0	0	0.86786	1	2420	2420		26.796	0	1	525810	+		11524	19720	8081	8089	13125	13125					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30230712890625	2	456.299853	910.585153	0.23964	0.00010935	1.5979	0.00072912	1.8375	0.00083847	456.3004567864084	43.097	2.576	43.154	41.691	44.267	0.056747					113	66	3	0	0	0	0.86786	2	2929	2929;2989		26.796	0	1	821670	+		11525	19720	8081	8089	13126;13127	13126					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3012390136719	2	456.299853	910.585153	0.18552	8.4654E-05	2.8375	0.0012948	3.0231	0.0013794	456.3010022539405	33.29	1.7406	33.257	32.935	34.675	-0.032681					212	75	4	0	0	0	0.86786	1	1632	1632		26.796	7.4361	1	1700700	+		11526	19720	8081	8089	13128	13128					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30120849609375	2	456.299853	910.585153	-0.16313	-7.4434E-05	2.0671	0.00094322	1.904	0.00086878	456.30063437425633	43.131	1.7393	43.081	42.268	44.008	-0.050308					99	45	4	0	0	0	0.86786	1	2927	2927		26.796	0	1	855890	+		11527	19720	8081	8089	13129	13129					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.30145263671875	2	456.299853	910.585153	-0.40408	-0.00018438	3.3963	0.0015497	2.9922	0.0013653	456.3012719086531	32.915	1.5209	33.085	32.546	34.067	0.16971					108	35	4	0	0	0	0.85108	2	2375	2375;2386		26.796	0	1	2612400	+		11528	19720	8081	8089	13130;13131	13130					0.12628422833677178
GLGVALVGLL	10	Unmodified	_GLGVALVGLL_					0	0	0			REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	REV__ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.3011169433594	2	456.299853	910.585153	0.82269	0.00037539	2.1236	0.000969	2.9463	0.0013444	456.30067401982916	32.79	1.601	33.001	32.465	34.066	0.21168					118	37	4	0	0	0	0.86786	1	2385	2385		26.796	1.3459	1	2892400	+		11529	19720	8081	8089	13132	13132					0.12628422833677178
GLGVFVRAL	9	Unmodified	_GLGVFVRAL_					0	0	0		ENSG00000176787|ENST00000321522|OR52E2	ENSG00000176787|ENST00000321522|OR52E2	ENSG00000176787|ENST00000321522|OR52E2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2890319824219	2	466.28982	930.565087	-0.42617	-0.00019872	0.52169	0.00024326	0.095514	4.4537E-05	466.2898922448067	74.098	1.2536	74.054	73.807	75.061	-0.043877					90	43	4	0	0	0	0.76996	1	7338	7338		33.516	3.0119	1	967050			11530	7098	8082	8090	13133	13133					0.09702671893705883
GLGVKGIAP	9	Unmodified	_GLGVKGIAP_					0	0	0		nc|ENSG00000130988|Q15493-2|RGN;ENSG00000130988|ENST00000397180|RGN	nc|ENSG00000130988|Q15493-2|RGN	nc|ENSG00000130988|Q15493-2|RGN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5654602050781	2	406.255446	810.496338	-0.28314	-0.00011503	3.8021	0.0015446	3.5189	0.0014296	406.25686782045995	64.948	2.1458	64.913	63.126	65.272	-0.034798					112	72	2	0	0	0	0.20789	1	6005	6005		18.324	13.643	1	69933			11531	3705	8083	8091	13134	13134					0.08351007593989834
GLGVKGIAP	9	Unmodified	_GLGVKGIAP_					0	0	0		nc|ENSG00000130988|Q15493-2|RGN;ENSG00000130988|ENST00000397180|RGN	nc|ENSG00000130988|Q15493-2|RGN	nc|ENSG00000130988|Q15493-2|RGN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2574462890625	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.7932	1	3743	3743		19.36	1.0356	1	334920			11532	3705	8083	8091	13135	13135					0.08351007593989834
GLGVMQFSH	9	Unmodified	_GLGVMQFSH_					0	0	0			REV__ENST00000609015.5_2_3:193767133-193776214:-|nuORF	REV__ENST00000609015.5_2_3:193767133-193776214:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.2364807128906	2	488.23947	974.464386	-1.0114	-0.00049382	-0.21395	-0.00010446	-1.2254	-0.00059828	488.23935780501665	57.122	0.88154	57.519	57.203	58.084	0.39672					35	21	2	0	0	0	0.20789	1	5965	5965		30.504	0	1	3854700	+		11533	29404	8084	8092	13136	13136					-0.02386728151452644
GLHLFLVIRDI	11	Unmodified	_GLHLFLVIRDI_					0	0	0		ENST00000301180.9_1_12:51112810-51115143:+|nuORF	ENST00000301180.9_1_12:51112810-51115143:+|nuORF	ENST00000301180.9_1_12:51112810-51115143:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3975219726562	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.7342	1	12228	12228		25.574	3.6142	1	2297700			11534	9802	8085	8093	13137	13137					0.14054504144905877
GLHRLPHWRRR	11	Unmodified	_GLHRLPHWRRR_					0	0	0		ENST00000250894.8_2_16:1818305-1818896:+|nuORF	ENST00000250894.8_2_16:1818305-1818896:+|nuORF	ENST00000250894.8_2_16:1818305-1818896:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.62542724609375	3	495.29211	1482.8545	0.10312	5.1075E-05	-1.1003	-0.00054499	-0.99722	-0.00049391	495.6259190334846	17.738	0.52859	17.255	17.077	17.606	-0.48256					30	11	3	0	0	0	0.67762	1	307	307		35.178	7.5343	1	120310			11535	9293	8086	8094	13138	13138					0.13238794293374667
GLHTRKGT	8	Unmodified	_GLHTRKGT_					0	0	0			REV__ENSG00000211456|ENST00000389061|SACM1L	REV__ENSG00000211456|ENST00000389061|SACM1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25250244140625	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87479	1	7922	7922		30.504	2.2494	1	2494100	+		11536	23597	8087	8095	13139	13139					0.048394536773685104
GLHVQRRHLPL	11	Unmodified	_GLHVQRRHLPL_					0	0	0			REV__ENST00000443119.7_3_16:70405905-70406055:+|nuORF	REV__ENST00000443119.7_3_16:70405905-70406055:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.60186767578125	3	442.60195	1324.78402	-0.15208	-6.7312E-05	-1.9001	-0.00084101	-2.0522	-0.00090832	442.6010716654733	103.97	1.4842	103.96	103.51	105	-0.0035706					84	35	4	0	0	0	0.75906	1	11251	11251		20.03	4.6974	1	603650	+		11537	26775	8088	8096	13140	13140					0.1346207618507833
GLIAALASP	9	Unmodified	_GLIAALASP_					0	0	0			REV__ENSG00000106771|ENST00000374586|TMEM245	REV__ENSG00000106771|ENST00000374586|TMEM245	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2575988769531	2	406.747453	811.480354	-0.18661	-7.5905E-05	3.8377	0.001561	3.651	0.0014851	406.7489524139519	58.527	1.3384	58.513	58.258	59.597	-0.013733					67	42	2	0	0	0	0.20789	1	5317	5317		18.324	0	1	55929	+		11538	17627	8089	8097	13141	13141					0.06707301357073447
GLIAALASP	9	Unmodified	_GLIAALASP_					0	0	0			REV__ENSG00000106771|ENST00000374586|TMEM245	REV__ENSG00000106771|ENST00000374586|TMEM245	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.747453	811.480354	-1.8681	-0.00075983	5.6398	0.002294	3.7717	0.0015341	406.74971509266544	58.8	0.61849	58.887	58.499	59.118	0.087002	0.18677	0.0010933	NaN	25.45	42	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82184	+		11539	17627	8089	8097							0.06707301357073447
GLIALRKV	8	Unmodified	_GLIALRKV_					0	0	0			REV__ENST00000540341.1_1_12:8787977-8789216:+|nuORF	REV__ENST00000540341.1_1_12:8787977-8789216:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3004150390625	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.80706	1	6679	6679		19.36	1.0356	1	1072400	+		11540	28461	8090	8098	13142	13142					0.14627262273359065
GLIAPIQL	8	Unmodified	_GLIAPIQL_					0	0	0			REV__ENST00000562118.1_1_16:68857288-68867399:+|nuORF	REV__ENST00000562118.1_1_16:68857288-68867399:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.26678466796875	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.90024	1	2665	2665		39.021	0	1	795210	+		11541	16308	8091	8099	13143	13143					0.09792178253815109
GLIDKIPI	8	Unmodified	_GLIDKIPI_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7598571777344	2	434.778754	867.542954	0.61914	0.00026919	-3.2751	-0.001424	-2.656	-0.0011548	434.7797504271211	87.455	2.0173	87.604	86.992	89.009	0.14956					68	47	2	0	0	0	0.4196	1	8637	8637		30.504	11.144	1	69969			11542	14652	8092	8100	13144	13144					0.10388447425293634
GLIDKIPI	8	Unmodified	_GLIDKIPI_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799987792969	2	434.778754	867.542954	-0.61408	-0.00026699	3.3286	0.0014472	2.7146	0.0011802	434.78015323105376	52.924	3.3917	52.849	52.471	55.862	-0.074512					147	100	2	0	0	0	0.91472	1	4276	4276		44.117	3.5442	1	526750			11543	14652	8092	8100	13145	13145					0.10388447425293634
GLIDKIPI	8	Unmodified	_GLIDKIPI_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77947998046875	2	434.778754	867.542954	-0.751	-0.00032652	4.1859	0.0018199	3.4349	0.0014934	434.7803971713461	57.433	2.0791	57.417	56.899	58.978	-0.01643					181	98	2	0	0	0	0.85277	1	4959	4959		25.45	4.9683	1	278920			11544	14652	8092	8100	13146	13146					0.10388447425293634
GLIDKIPI	8	Unmodified	_GLIDKIPI_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.778754	867.542954	-1.6185	-0.00070367	4.5376	0.0019729	2.9191	0.0012692	434.78055682745344	52.89	3.0318	52.931	51.454	54.486	0.040592	0.053927	0.00073055	NaN	44.117	188	101	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	330390			11545	14652	8092	8100							0.10388447425293634
GLIDKIPI	8	Unmodified	_GLIDKIPI_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	434.778754	867.542954	-0.26666	-0.00011594	3.0841	0.0013409	2.8174	0.0012249	434.7800133482554	52.51	1.2399	52.934	52.638	53.878	0.42348	0.05732	-0.00053339	NaN	44.117	46	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	286130			11546	14652	8092	8100							0.10388447425293634
GLIDKIPI	8	Unmodified	_GLIDKIPI_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|10|1|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	434.778754	867.542954	0.3331	0.00014483	2.5608	0.0011134	2.8939	0.0012582	434.77980566911504	52.126	1.1915	52.793	52.517	53.708	0.66729	-0.083814	-0.00098843	NaN	44.117	46	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	501470			11547	14652	8092	8100							0.10388447425293634
GLIEPLKV	8	Unmodified	_GLIEPLKV_					0	0	0			REV__nc|ENSG00000005302|Q8N5Y2-4|MSL3	REV__nc|ENSG00000005302|Q8N5Y2-4|MSL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796936035156	2	434.778754	867.542954	-1.3516	-0.00058764	3.9223	0.0017053	2.5707	0.0011177	434.78034506978366	39.667	1.8641	39.623	39.121	40.985	-0.043697					176	46	5	0	0	0	0.88915	1	2941	2941		35.201	0	1	3943300	+		11548	16083	8093	8101	13147	13147					0.10388447425293634
GLIEPLKV	8	Unmodified	_GLIEPLKV_					0	0	0			REV__nc|ENSG00000005302|Q8N5Y2-4|MSL3	REV__nc|ENSG00000005302|Q8N5Y2-4|MSL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77960205078125	2	434.778754	867.542954	-0.29603	-0.00012871	3.1388	0.0013647	2.8428	0.001236	434.77998100939635	44.91	1.6932	44.842	44.077	45.77	-0.068634					139	41	4	0	0	0	0.884	1	3281	3281		33.516	0	1	1190800	+		11549	16083	8093	8101	13148	13148					0.10388447425293634
GLIGTSKVV	9	Unmodified	_GLIGTSKVV_					0	0	0			REV__ENSG00000115020|ENST00000264380|PIKFYVE	REV__ENSG00000115020|ENST00000264380|PIKFYVE	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2671203613281	2	437.273835	872.533118	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.38	1	55.38	54.88	55.88	0								0	0	0	0.28386	1	4698	4698		37.159	5.2042	1		+		11550	18080	8094	8102	13149	13149					0.09175259419907889
GLIGVILK	8	Unmodified	_GLIGVILK_					0	0	0			REV__nc|ENSG00000134545|P26715-2|KLRC1	REV__nc|ENSG00000134545|P26715-2|KLRC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.91204833984375	2	406.783839	811.553125	1.2933	0.00052611	2.6275	0.0010688	3.9209	0.0015949	406.7848502332102	37.303	1.383	37.616	37.206	38.589	0.31312					48	34	2	0	0	0	0.4196	1	3015	3015		4.3163	2.9886	1	143620	+		11551	19150	8095	8103	13150	13150					0.1398105515052066
GLIHLKLRPS	10	Unmodified	_GLIHLKLRPS_					0	0	0		ENST00000380667.6_1_9:16583064-16870672:-|nuORF	ENST00000380667.6_1_9:16583064-16870672:-|nuORF	ENST00000380667.6_1_9:16583064-16870672:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3638305664062	2	567.361308	1132.70806	0.15466	8.7749E-05	3.9039	0.0022149	4.0585	0.0023027	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.86452	1	3179	3179		30.504	6.3009	1	1937600			11552	10928	8096	8104	13151	13151					0.1470167928491719
GLIIFQNKV	9	Unmodified	_GLIIFQNKV_					0	0	0			REV__ENST00000321521.13_1_5:102538364-102538460:+|nuORF	REV__ENST00000321521.13_1_5:102538364-102538460:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3126831054688	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.76996	2	12739	12739;12857		33.516	4.366	1	4038100	+		11553	25014	8097	8105	13152;13153	13152					0.10343210236646883
GLIIGISMEI	10	Unmodified	_GLIIGISMEI_					0	0	0			REV__ENSG00000164983|ENST00000297632|TMEM65	REV__ENSG00000164983|ENST00000297632|TMEM65	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3033447265625	2	523.301736	1044.58892	1.0264	0.00053713	2.344	0.0012266	3.3704	0.0017638	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.71042	1	8641	8641		44.117	2.6902	1	3817300	+		11554	21137	8098	8106	13154	13154					0.06840724545213561
GLIIIVTPS	9	Unmodified	_GLIIIVTPS_					0	0	0			REV__ENSG00000146233|ENST00000275016|CYP39A1	REV__ENSG00000146233|ENST00000275016|CYP39A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79034423828125	2	456.791861	911.569169	0.2225	0.00010163	1.2501	0.00057106	1.4726	0.00067269	456.79228647464913	41.052	1.411	41.126	40.545	41.956	0.073418					84	43	2	0	0	0	0.77546	1	2679	2679		31.955	0	1	319050	+		11555	19998	8099	8107	13155	13155					0.10984716596760791
GLIILSVFYVW	11	Unmodified	_GLIILSVFYVW_					0	0	0			REV__nc|ENSG00000157388|Q01668-2|CACNA1D	REV__nc|ENSG00000157388|Q01668-2|CACNA1D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2566223144531	3	437.256675	1308.7482	-0.16089	-7.0349E-05	1.662	0.00072671	1.5011	0.00065636	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.69931	1	10566	10566		31.634	4.587	1	727380	+		11556	29952	8100	8108	13156	13156					0.10617181164843714
GLIILSVFYVW	11	Unmodified	_GLIILSVFYVW_					0	0	0			REV__nc|ENSG00000157388|Q01668-2|CACNA1D	REV__nc|ENSG00000157388|Q01668-2|CACNA1D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2569885253906	3	437.256675	1308.7482	0.72446	0.00031677	0.81922	0.00035821	1.5437	0.00067498	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.73621	1	10286	10286		25.126	1.6116	1	670840	+		11557	29952	8100	8108	13157	13157					0.10617181164843714
GLIISGPIL	9	Unmodified	_GLIISGPIL_					0	0	0		nc|ENSG00000164741|Q96QB1-4|DLC1;nc|ENSG00000164741|Q96QB1-1|DLC1;nc|ENSG00000164741|Q96QB1-6|DLC1;ENSG00000164741|ENST00000276297|DLC1	nc|ENSG00000164741|Q96QB1-4|DLC1	nc|ENSG00000164741|Q96QB1-4|DLC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.78753662109375	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.67235	1	3588	3588		42.474	3.6683	1	539980			11558	5997	8101	8109	13158	13158					0.11308733942325944
GLIISGPIL	9	Unmodified	_GLIISGPIL_					0	0	0		nc|ENSG00000164741|Q96QB1-4|DLC1;nc|ENSG00000164741|Q96QB1-1|DLC1;nc|ENSG00000164741|Q96QB1-6|DLC1;ENSG00000164741|ENST00000276297|DLC1	nc|ENSG00000164741|Q96QB1-4|DLC1	nc|ENSG00000164741|Q96QB1-4|DLC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7867126464844	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.77546	1	3463	3463		31.955	6.5047	1	493390			11559	5997	8101	8109	13159	13159					0.11308733942325944
GLIISGPIL	9	Unmodified	_GLIISGPIL_					0	0	0		nc|ENSG00000164741|Q96QB1-4|DLC1;nc|ENSG00000164741|Q96QB1-1|DLC1;nc|ENSG00000164741|Q96QB1-6|DLC1;ENSG00000164741|ENST00000276297|DLC1	nc|ENSG00000164741|Q96QB1-4|DLC1	nc|ENSG00000164741|Q96QB1-4|DLC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.787841796875	2	441.786579	881.558604	-1.4973	-0.00066148	4.3629	0.0019275	2.8656	0.001266	441.788391738542	44.7	2.6432	44.712	43.395	46.038	0.012058					134	65	3	0	0	0	0.7932	1	3181	3181		26.796	1.3459	1	555340			11560	5997	8101	8109	13160	13160					0.11308733942325944
GLIIVPRTY	9	Unmodified	_GLIIVPRTY_					0	0	0			REV__ENST00000475394.5_1_3:196792573-196802726:-|nuORF	REV__ENST00000475394.5_1_3:196792573-196802726:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.31396484375	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.7724	-0.0014314	-4.3342	-0.0022378	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.69914	5	10332	10189;10332;10356;10515;10539		40.573	7.7602	1	66055000	+		11561	16718	8102	8110	13161;13162;13163;13164;13165	13162					0.10343210236646883
GLIIVPRTY	9	Unmodified	_GLIIVPRTY_					0	0	0			REV__ENST00000475394.5_1_3:196792573-196802726:-|nuORF	REV__ENST00000475394.5_1_3:196792573-196802726:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.313232421875	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.76255	1	12440	12440		35.618	1.4457	1	4038100	+		11562	16718	8102	8110	13166	13166					0.10343210236646883
GLILCFLWHLV	11	Unmodified	_GLILCFLWHLV_					0	0	0		ENST00000557577.1_1_14:73927794-73927890:-|nuORF	ENST00000557577.1_1_14:73927794-73927890:-|nuORF	ENST00000557577.1_1_14:73927794-73927890:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.5857849121094	3	438.586138	1312.73659	1.1659	0.00051134	-2.1161	-0.00092811	-0.95026	-0.00041677	438.58516849233104	31.929	1.1484	31.923	31.521	32.669	-0.0061455					44	26	2	0	0	0	0.62614	1	1769	1769		41.427	3.9184	1	409390			11563	13777	8103	8111	13167	13167					0.09272660869851279
GLILEKPV	8	Unmodified	_GLILEKPV_					0	0	0		nc|ENSG00000292339|O95671-2|ASMTL;ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL	nc|ENSG00000292339|O95671-2|ASMTL	nc|ENSG00000292339|O95671-2|ASMTL	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.780029296875	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.679	1	66.695	66.195	67.195	0.016205								0	0	0	0.29596	1	6251	6251		35.618	3.6634	1				11564	6469	8104	8112	13168	13168					0.10388447425293634
GLILEKPV	8	Unmodified	_GLILEKPV_					0	0	0		nc|ENSG00000292339|O95671-2|ASMTL;ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL	nc|ENSG00000292339|O95671-2|ASMTL	nc|ENSG00000292339|O95671-2|ASMTL	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77911376953125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.984	1	61.015	60.515	61.515	0.0312								0	0	0	0.29353	1	5699	5699		28.254	1.4582	1				11565	6469	8104	8112	13169	13169					0.10388447425293634
GLILMGVHS	9	Unmodified	_GLILMGVHS_					0	0	0			REV__ENSG00000185028|ENST00000328278|LRRC14B	REV__ENSG00000185028|ENST00000328278|LRRC14B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.80169677734375	2	463.760038	925.505523	-2.0386	-0.00094542	-2.2747	-0.0010549	-4.3133	-0.0020004	463.7586659033539	42.69	0.41672	43.387	43.174	43.591	0.69754					17	9	2	0	0	0	0.20789	1	3811	3811		31.955	15.482	1	199710	+		11566	22730	8105	8113	13170	13170					0.03979032888025813
GLILPVRTLLL	11	Unmodified	_GLILPVRTLLL_					0	0	0		nc|ENSG00000136891|Q9NXF1-2|TEX10;ENSG00000136891|ENST00000374902|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3662719726562	2	604.410466	1206.80638	3.205	0.0019371	-4.386	-0.0026509	-1.181	-0.0007138	604.4079348310128	104.47	0.25864	104.43	104.23	104.49	-0.04039					7	5	2	0	0	0	0.1729	1	11474	11474		26.693	16.428	1	131580			11567	4153	8106	8114	13171	13171					0.21124862810142986
GLILPVRTLLL	11	Unmodified	_GLILPVRTLLL_					0	0	0		nc|ENSG00000136891|Q9NXF1-2|TEX10;ENSG00000136891|ENST00000374902|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3663330078125	2	604.410466	1206.80638	1.0482	0.00063354	-1.7281	-0.0010445	-0.67988	-0.00041092	604.4092609427115	104.54	0.27124	104.71	104.54	104.81	0.17096					11	6	3	0	0	0	0.17472	1	11106	11106		18.262	8.5564	1	588130			11568	4153	8106	8114	13172	13172					0.21124862810142986
GLINFKRF	8	Unmodified	_GLINFKRF_					0	0	0			REV__nc|ENSG00000115415|P42224-2|STAT1	REV__nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.7956237792969	2	497.795269	993.575986	-1.5169	-0.00075511	2.6411	0.0013147	1.1242	0.00055963	497.7963799927103	49.017	1.345	49.017	48.626	49.971	0					75	31	3	0	0	0	0.82464	1	3884	3884		21.702	1.2205	1	491380	+		11569	18117	8107	8115	13173	13173					0.0789407426799471
GLINFKRF	8	Unmodified	_GLINFKRF_					0	0	0			REV__nc|ENSG00000115415|P42224-2|STAT1	REV__nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.79583740234375	2	497.795269	993.575986	-1.2593	-0.00062688	2.6686	0.0013284	1.4093	0.00070156	497.79616758279207	48.708	1.9058	48.709	47.99	49.896	0.00017166					121	43	4	0	0	0	0.81548	1	4015	4015		20.482	1.1219	1	500820	+		11570	18117	8107	8115	13174	13174					0.0789407426799471
GLINFKRF	8	Unmodified	_GLINFKRF_					0	0	0			REV__nc|ENSG00000115415|P42224-2|STAT1	REV__nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.79510498046875	2	497.795269	993.575986	-0.62564	-0.00031144	1.9566	0.00097397	1.3309	0.00066253	497.7959662701911	48.367	0.7753	48.389	47.898	48.674	0.02227					49	20	3	0	0	0	0.86288	1	3658	3658		26.796	2.5934	1	392340	+		11571	18117	8107	8115	13175	13175					0.0789407426799471
GLINFKRF	8	Unmodified	_GLINFKRF_					0	0	0			REV__nc|ENSG00000115415|P42224-2|STAT1	REV__nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.7955627441406	2	497.795269	993.575986	0.32848	0.00016352	0.8359	0.0004161	1.1644	0.00057962	497.7954109844358	48.391	0.87605	48.429	47.96	48.836	0.037731					54	21	3	0	0	0	0.85277	1	3708	3708		25.45	6.0902	1	407880	+		11572	18117	8107	8115	13176	13176					0.0789407426799471
GLINFKRF	8	Unmodified	_GLINFKRF_					0	0	0			REV__nc|ENSG00000115415|P42224-2|STAT1	REV__nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.7951354980469	2	497.795269	993.575986	0.33469	0.00016661	1.0393	0.00051735	1.374	0.00068396	497.79551634358694	49.085	0.97178	49.123	48.706	49.678	0.037735					52	22	3	0	0	0	0.85277	1	3754	3754		25.45	1.2474	1	383630	+		11573	18117	8107	8115	13177	13177					0.0789407426799471
GLINFKRF	8	Unmodified	_GLINFKRF_					0	0	0			REV__nc|ENSG00000115415|P42224-2|STAT1	REV__nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.7962341308594	2	497.795269	993.575986	-0.21329	-0.00010617	1.5343	0.00076377	1.321	0.0006576	497.7957318764316	48.396	0.83173	48.303	47.807	48.639	-0.093178					51	20	3	0	0	0	0.86791	1	3687	3687		28.254	5.2176	1	388480	+		11574	18117	8107	8115	13178	13178					0.0789407426799471
GLIPCPML	8	Unmodified	_GLIPCPML_					0	0	0			REV__ENST00000574205.5_1_17:7147203-7147500:-|nuORF	REV__ENST00000574205.5_1_17:7147203-7147500:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2272033691406	2	422.226985	842.439417	-0.15893	-6.7102E-05	2.2438	0.00094738	2.0849	0.00088028	422.2279069450433	56.51	0.46441	56.498	56.448	56.912	-0.012203					32	19	2	0	0	0	0.84567	1	5086	5086		24.504	0.30126	1	609110	+		11575	28968	8108	8116	13179	13179					0.011895007216025988
GLIPCPML	8	Unmodified	_GLIPCPML_					0	0	0			REV__ENST00000574205.5_1_17:7147203-7147500:-|nuORF	REV__ENST00000574205.5_1_17:7147203-7147500:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2273254394531	2	422.226985	842.439417	-0.18819	-7.946E-05	1.922	0.00081152	1.7338	0.00073206	422.22774658617425	61.684	0.88657	61.675	61.564	62.45	-0.0094147					63	38	2	0	0	0	0.88393	1	5734	5734		33.493	1.9141	1	445730	+		11576	28968	8108	8116	13180	13180					0.011895007216025988
GLIPCPML	8	Unmodified	_GLIPCPML_					0	0	0			REV__ENST00000574205.5_1_17:7147203-7147500:-|nuORF	REV__ENST00000574205.5_1_17:7147203-7147500:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2272033691406	2	422.226985	842.439417	-0.032306	-1.364E-05	1.895	0.00080012	1.8627	0.00078648	422.2276832627875	61.725	1.2193	61.692	61.376	62.595	-0.033173					71	53	2	0	0	0	0.88393	1	5879	5879		33.493	2.9893	1	435140	+		11577	28968	8108	8116	13181	13181					0.011895007216025988
GLIPCPML	8	Unmodified	_GLIPCPML_					0	0	0			REV__ENST00000574205.5_1_17:7147203-7147500:-|nuORF	REV__ENST00000574205.5_1_17:7147203-7147500:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2289733886719	2	422.226985	842.439417	-1.8189	-0.00076799	4.4006	0.001858	2.5817	0.0010901	422.2287575685824	53.7	1.4297	53.748	52.82	54.25	0.047802					90	48	2	0	0	0	0.88393	1	4429	4429		33.493	8.0428	1	353570	+		11578	28968	8108	8116	13182	13182					0.011895007216025988
GLIPCVPKR	9	Unmodified	_GLIPCVPKR_					0	0	0			REV__ENSG00000173421|ENST00000452691|IHO1	REV__ENSG00000173421|ENST00000452691|IHO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79620361328125	2	491.796955	981.579357	-0.08082	-3.9747E-05	-2.2275	-0.0010955	-2.3083	-0.0011352	491.7960401944478	66.981	1.1041	66.997	66.508	67.612	0.016197					82	51	2	0	0	0	0.76996	1	6262	6262		33.516	5.2613	1	81064	+		11579	21922	8109	8117	13183	13183					0.08783001050346684
GLIPCVPKR	9	Unmodified	_GLIPCVPKR_					0	0	0			REV__ENSG00000173421|ENST00000452691|IHO1	REV__ENSG00000173421|ENST00000452691|IHO1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79266357421875	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.361	1	69.427	68.927	69.927	0.065506								0	0	0	0.32159	1	6255	6255		23.042	3.6825	1		+		11580	21922	8109	8117	13184	13184					0.08783001050346684
GLIPGARW	8	Unmodified	_GLIPGARW_					0	0	0		ENST00000305557.9_1_2:74653101-74653329:-|nuORF	ENST00000305557.9_1_2:74653101-74653329:-|nuORF	ENST00000305557.9_1_2:74653101-74653329:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25018310546875	2	435.253237	868.491922	-1.5314	-0.00066653	-2.8716	-0.0012499	-4.4029	-0.0019164	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.90024	1	8101	8101		39.021	7.4426	1	2494100			11581	9849	8110	8118	13185	13185					0.0524154317108696
GLIPVLEK	8	Unmodified	_GLIPVLEK_					0	0	0		nc|ENSG00000102796|A0PJE2-2|DHRS12;ENSG00000102796|ENST00000444610|DHRS12;nc|ENSG00000102796|A0PJE2-3|DHRS12;nc|ENSG00000102796|A0PJE2|DHRS12	nc|ENSG00000102796|A0PJE2-2|DHRS12	nc|ENSG00000102796|A0PJE2-2|DHRS12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7797546386719	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.86288	1	2732	2732		26.796	1.3459	1	2524800			11582	2019	8111	8119	13186	13186					0.10388447425293634
GLIPVLEK	8	Unmodified	_GLIPVLEK_					0	0	0		nc|ENSG00000102796|A0PJE2-2|DHRS12;ENSG00000102796|ENST00000444610|DHRS12;nc|ENSG00000102796|A0PJE2-3|DHRS12;nc|ENSG00000102796|A0PJE2|DHRS12	nc|ENSG00000102796|A0PJE2-2|DHRS12	nc|ENSG00000102796|A0PJE2-2|DHRS12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7802734375	2	434.778754	867.542954	0.083396	3.6259E-05	3.2514	0.0014137	3.3348	0.0014499	434.78005466270537	34.317	1.0002	34.271	33.763	34.763	-0.045815					125	41	4	0	0	0	0.884	1	1751	1751		33.516	6.7195	1	3033400			11583	2019	8111	8119	13187	13187					0.10388447425293634
GLIRGHFLL	9	Unmodified	_GLIRGHFLL_					0	0	0		ENSG00000167077|ENST00000401548|MEI1;nc|ENSG00000167077|Q5TIA1-5|MEI1;nc|ENSG00000167077|Q5TIA1-3|MEI1;nc|ENSG00000167077|Q5TIA1-2|MEI1;ENST00000473736.5_1_22:42172081-42174878:+|nuORF	ENSG00000167077|ENST00000401548|MEI1	ENSG00000167077|ENST00000401548|MEI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3167114257812	2	513.316369	1024.61818	-0.86606	-0.00044456	0.65911	0.00033833	-0.20695	-0.00010623	513.3165332025184	43.367	1.6866	43.367	42.894	44.58	0.00016785					82	40	3	0	0	0	0.78851	1	3316	3316		28.254	1.4582	1	411860			11584	6264	8112	8120	13188	13188					0.10686049676382936
GLIRGHFLL	9	Unmodified	_GLIRGHFLL_					0	0	0		ENSG00000167077|ENST00000401548|MEI1;nc|ENSG00000167077|Q5TIA1-5|MEI1;nc|ENSG00000167077|Q5TIA1-3|MEI1;nc|ENSG00000167077|Q5TIA1-2|MEI1;ENST00000473736.5_1_22:42172081-42174878:+|nuORF	ENSG00000167077|ENST00000401548|MEI1	ENSG00000167077|ENST00000401548|MEI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3184814453125	2	513.316369	1024.61818	-0.38756	-0.00019894	1.1387	0.00058453	0.75117	0.00038559	513.3170376628356	53.655	1.47	53.703	53.107	54.577	0.047802					76	53	2	0	0	0	0.7932	1	4426	4426		19.36	1.995	1	209860			11585	6264	8112	8120	13189	13189					0.10686049676382936
GLISGIFNLLS	11	Unmodified	_GLISGIFNLLS_					0	0	0		ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3304443359375	2	567.331882	1132.64921	0.77491	0.00043963	-4.0071	-0.0022734	-3.2322	-0.0018337	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.6493	1	8912	8912		38.754	3.6016	1	6344600			11586	8315	8113	8121	13190	13190					0.0881915819995811
GLISLPSLI	9	Unmodified	_GLISLPSLI_					0	0	0		ENST00000340807.3_1_13:99910724-99913984:-|nuORF	ENST00000340807.3_1_13:99910724-99913984:-|nuORF	ENST00000340807.3_1_13:99910724-99913984:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79302978515625	2	456.791861	911.569169	-0.042653	-1.9484E-05	2.8269	0.0012913	2.7842	0.0012718	456.79307389883803	36.432	2.1584	36.413	35.42	37.578	-0.018673					171	47	5	0	0	0	0.7932	1	2295	2295		25.45	0	1	4460800			11587	10236	8114	8122	13191	13191					0.10984716596760791
GLISLPSLI	9	Unmodified	_GLISLPSLI_					0	0	0		ENST00000340807.3_1_13:99910724-99913984:-|nuORF	ENST00000340807.3_1_13:99910724-99913984:-|nuORF	ENST00000340807.3_1_13:99910724-99913984:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79150390625	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.76996	1	3242	3242		33.516	1.5607	1	652510			11588	10236	8114	8122	13192	13192					0.10984716596760791
GLISLPSLI	9	Unmodified	_GLISLPSLI_					0	0	0		ENST00000340807.3_1_13:99910724-99913984:-|nuORF	ENST00000340807.3_1_13:99910724-99913984:-|nuORF	ENST00000340807.3_1_13:99910724-99913984:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79095458984375	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.7932	1	3275	3275		25.45	1.2474	1	608260			11589	10236	8114	8122	13193	13193					0.10984716596760791
GLISLPSLI	9	Unmodified	_GLISLPSLI_					0	0	0		ENST00000340807.3_1_13:99910724-99913984:-|nuORF	ENST00000340807.3_1_13:99910724-99913984:-|nuORF	ENST00000340807.3_1_13:99910724-99913984:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7908935546875	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.69914	1	2818	2818		40.573	7.057	1	548640			11590	10236	8114	8122	13194	13194					0.10984716596760791
GLISTALAGP	10	Unmodified	_GLISTALAGP_					0	0	0		ENSG00000145826|ENST00000274507|LECT2	ENSG00000145826|ENST00000274507|LECT2	ENSG00000145826|ENST00000274507|LECT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.26220703125	2	450.263468	898.512382	-2.4214	-0.0010903	-0.017002	-7.6553E-06	-2.4384	-0.0010979	450.2632943884122	40.207	1.0457	40.579	39.902	40.947	0.37184					60	26	3	0	0	0	0.81018	1	3419	3419		38.806	2.3594	1	1534500			11591	4797	8115	8123	13195	13195					0.05906669040234647
GLISTQSKKV	10	Unmodified	_GLISTQSKKV_					0	0	0			REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.82080078125	2	530.821681	1059.62881	0.64608	0.00034295	-2.2244	-0.0011807	-1.5783	-0.00083778	530.820506018963	80.205	1.3856	80.261	79.781	81.166	0.055916					85	34	3	0	0	0	0.86272	1	8023	8023		24.519	0.31644	1	627060	+		11592	20098	8116	8124	13196	13196					0.10137987540133508
GLITFGRMVQ	10	Unmodified	_GLITFGRMVQ_					0	0	0		ENSG00000100934|ENST00000307712|SEC23A;ENST00000555682.1_1_14:39560581-39561747:-|nuORF;ENSG00000101310|ENST00000650089|SEC23B	ENSG00000100934|ENST00000307712|SEC23A;ENSG00000101310|ENST00000650089|SEC23B	ENSG00000100934|ENST00000307712|SEC23A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.341064453125	2	561.310426	1120.6063	3.115	0.0017485	-2.661	-0.0014936	0.45406	0.00025487	561.310259113919	118.17	0.090569	118.14	118.08	118.17	-0.024208					4	2	2	0	0	0	0.37624	1	13083	13083		22.58	11.714	1	11794			11593	1886;1928	8117	8125	13197	13197					0.05082064870885006
GLITLALPLD	10	Unmodified	_GLITLALPLD_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1;nc|ENSG00000075275|Q9NYQ6-2|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.31689453125	2	513.3157	1024.61685	-0.78904	-0.00040502	2.024	0.0010389	1.2349	0.00063391	513.316563461299	43.382	2.0824	43.347	42.842	44.924	-0.035816					87	48	3	0	0	0	0.86718	1	3390	3390		27.882	5.9224	1	377070			11594	1328	8118	8126	13198	13198					0.10552370796949617
GLITLALPLD	10	Unmodified	_GLITLALPLD_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1;nc|ENSG00000075275|Q9NYQ6-2|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3177490234375	2	513.3157	1024.61685	-0.36813	-0.00018897	2.361	0.0012119	1.9928	0.001023	513.3169589115231	53.646	1.4284	53.622	52.782	54.21	-0.024754					61	35	3	0	0	0	0.86763	1	4835	4835		26.693	4.733	1	246220			11595	1328	8118	8126	13199	13199					0.10552370796949617
GLITLPAVV	9	Unmodified	_GLITLPAVV_					0	0	0			REV__ENSG00000165678|ENST00000372134|GHITM	REV__ENSG00000165678|ENST00000372134|GHITM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7879333496094	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.7932	1	2386	2386		20.482	1.1219	1	12467000	+		11596	21206	8119	8127	13200	13200					0.11308733942325944
GLIVGPLSL	9	Unmodified	_GLIVGPLSL_					0	0	0			REV__ENSG00000188886|ENST00000342380|ASTL	REV__ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77984619140625	2	434.778754	867.542954	1.0211	0.00044394	2.4757	0.0010764	3.4967	0.0015203	434.77962104590523	33.405	1.0416	33.404	32.826	33.868	-0.0016365					60	24	3	0	0	0	0.7932	1	2005	2005		24.203	5.8783	1	347080	+		11597	23041	8120	8128	13201	13201					0.10388447425293634
GLIVGPLSL	9	Unmodified	_GLIVGPLSL_					0	0	0			REV__ENSG00000188886|ENST00000342380|ASTL	REV__ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7803039550781	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.69914	2	2563	2563;2587		40.573	7.057	1	8013100	+		11598	23041	8120	8128	13202;13203	13202					0.10388447425293634
GLIVGPLSL	9	Unmodified	_GLIVGPLSL_					0	0	0			REV__ENSG00000188886|ENST00000342380|ASTL	REV__ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801513671875	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.5393	3	2533	2533;2545;2569		50.025	13.356	1	7451800	+		11599	23041	8120	8128	13204;13205;13206	13204					0.10388447425293634
GLIVLAKR	8	Unmodified	_GLIVLAKR_					0	0	0			REV__ENSG00000086570|ENST00000261800|FAT2	REV__ENSG00000086570|ENST00000261800|FAT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3000183105469	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.80706	1	7610	7610		19.36	0	1	5485100	+		11600	16912	8121	8129	13207	13207					0.14627262273370434
GLIVLAPTK	9	Unmodified	_GLIVLAPTK_					0	0	0			REV__ENST00000426528.5_1_X:102139368-102152590:+|nuORF	REV__ENST00000426528.5_1_X:102139368-102152590:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3011169433594	2	456.299853	910.585153	-1.7707	-0.00080797	4.1491	0.0018932	2.3784	0.0010852	456.3016315256623	46.489	1.398	46.489	46.06	47.458	0					92	40	3	0	0	0	0.71772	1	3531	3531		39.253	4.0521	1	435240	+		11601	26544	8122	8130	13208	13208					0.1262842283366581
GLIVVFKNH	9	Unmodified	_GLIVVFKNH_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8088989257812	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.7932	1	4538	4538		19.36	0	1	771120	+		11602	19018	8123	8131	13209	13209					0.09042343439477918
GLIVVFKNH	9	Unmodified	_GLIVVFKNH_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8087158203125	2	513.808377	1025.6022	-0.26337	-0.00013532	1.4503	0.00074519	1.187	0.00060987	513.8089696081398	52.202	2.125	52.215	51.482	53.607	0.012436					136	54	4	0	0	0	0.7932	1	4493	4493		25.45	0	1	732880	+		11603	19018	8123	8131	13210	13210					0.09042343439477918
GLIVVFKNH	9	Unmodified	_GLIVVFKNH_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8104858398438	2	513.808377	1025.6022	-0.38547	-0.00019806	1.7192	0.00088333	1.3337	0.00068527	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.77546	2	4109	3917;4109		31.955	4.0726	1	1377600	+		11604	19018	8123	8131	13211;13212	13212					0.09042343439477918
GLIVVFKNH	9	Unmodified	_GLIVVFKNH_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8084716796875	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.7932	1	4176	4176		24.203	2.2429	1	926440	+		11605	19018	8123	8131	13213	13213					0.09042343439477918
GLIVVFKNHLL	11	Unmodified	_GLIVVFKNHLL_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.2655334472656	3	418.264053	1251.77033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.604	1	49.646	49.146	50.146	0.042236								0	0	0	0.56276	1	3851	3851		32.751	1.1163	1		+		11606	19018	8124	8132	13214	13214					0.15451405633280046
GLIVVFKNHLL	11	Unmodified	_GLIVVFKNHLL_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.2649841308594	3	418.264053	1251.77033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.82	1	49.863	49.363	50.363	0.042236								0	0	0	0.56276	1	3881	3881		20.03	2.1973	1		+		11607	19018	8124	8132	13215	13215					0.15451405633280046
GLIVVFKNHLL	11	Unmodified	_GLIVVFKNHLL_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.26611328125	3	418.264053	1251.77033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.887	1	49.929	49.429	50.429	0.042236								0	0	0	0.56276	1	3890	3890		26.063	8.8966	1		+		11608	19018	8124	8132	13216	13216					0.15451405633280046
GLIVVFKNHLL	11	Unmodified	_GLIVVFKNHLL_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.266357421875	3	418.264053	1251.77033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.966	1	50.008	49.508	50.508	0.042236								0	0	0	0.56276	1	3901	3901		30.569	10.254	1		+		11609	19018	8124	8132	13217	13217					0.15451405633280046
GLIVVFKNHLL	11	Unmodified	_GLIVVFKNHLL_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.2659912109375	3	418.264053	1251.77033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.162	1	50.07	49.57	50.57	-0.091797								0	0	0	0.56276	1	3926	3926		20.03	0.40354	1		+		11610	19018	8124	8132	13218	13218					0.15451405633280046
GLIVVFKNHLL	11	Unmodified	_GLIVVFKNHLL_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.2669677734375	3	418.264053	1251.77033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.316	1	50.224	49.724	50.724	-0.091797								0	0	0	0.56276	1	3947	3947		20.837	1.5745	1		+		11611	19018	8124	8132	13219	13219					0.15451405633280046
GLIWKPKNG	9	Unmodified	_GLIWKPKNG_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8014221191406	2	506.800552	1011.58655	0.2918	0.00014788	-0.072545	-3.6766E-05	0.21925	0.00011112	506.8005319323782	43.625	1.7295	43.682	42.323	44.053	0.056747					65	45	2	0	0	0	0.7932	1	2910	2910		24.203	0.68005	1	255230	+		11612	22167	8125	8133	13220	13220					0.08122056922422871
GLIWKPKNG	9	Unmodified	_GLIWKPKNG_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80035400390625	2	506.800552	1011.58655	0.3226	0.0001635	1.0842	0.00054946	1.4068	0.00071296	506.80101494321997	46.369	1.6079	46.407	46.092	47.7	0.038181					96	46	3	0	0	0	0.7932	1	3364	3364		17.365	0.89182	1	231410	+		11613	22167	8125	8133	13221	13221					0.08122056922422871
GLKARGAK	8	Unmodified	_GLKARGAK_					0	0	0			REV__ENST00000506579.5_1_5:140057288-140057606:-|nuORF	REV__ENST00000506579.5_1_5:140057288-140057606:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2112121582031	2	400.758687	799.502821	0.023972	9.6068E-06	3.1053	0.0012445	3.1292	0.0012541	400.7588053558213	22.383	0.3565	21.772	21.633	21.99	-0.6107					11	8	2	0	0	0	0.4196	1	926	926		12.959	0	1	19288	+		11614	27894	8126	8134	13222	13222					0.09504945545370447
GLKFVLINSKG	11	Unmodified	_GLKFVLINSKG_					0	0	0			REV__ENSG00000187522|ENST00000378372|HSPA14	REV__ENSG00000187522|ENST00000378372|HSPA14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.8621826171875	2	588.360973	1174.70739	0.15924	9.369E-05	-1.1433	-0.0006727	-0.9841	-0.00057901	588.3588159820199	64.768	1.1781	65.322	64.517	65.695	0.55386					77	28	3	0	0	0	0.7434	1	6966	6966		23.523	0.94304	1	266820	+		11615	22919	8127	8135	13223	13223					0.12702839845223934
GLKFVLINSKG	11	Unmodified	_GLKFVLINSKG_					0	0	0			REV__ENSG00000187522|ENST00000378372|HSPA14	REV__ENSG00000187522|ENST00000378372|HSPA14	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	588.360973	1174.70739	-0.74267	-0.00043696	-0.35009	-0.00020598	-1.0928	-0.00064294	588.3594685448144	64.828	1.1958	65.214	64.482	65.678	0.38615	-0.053961	0.00044116	NaN	23.523	66	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	412440	+		11616	22919	8127	8135							0.12702839845223934
GLKFVLINSKG	11	Unmodified	_GLKFVLINSKG_					0	0	0			REV__ENSG00000187522|ENST00000378372|HSPA14	REV__ENSG00000187522|ENST00000378372|HSPA14	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	588.360973	1174.70739	0.15924	9.369E-05	-1.1433	-0.0006727	-0.9841	-0.00057901	588.3588159820199	64.768	1.1781	65.322	64.517	65.695	0.55386	0.053961	-0.00049228	NaN	23.523	77	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	266820	+		11617	22919	8127	8135							0.12702839845223934
GLKKKQQN	8	Unmodified	_GLKKKQQN_					0	0	0			REV__nc|ENSG00000169432|Q15858-4|SCN9A;REV__ENSG00000185313|ENST00000449082|SCN10A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2876281738281	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.85277	1	10038	10038		25.45	2.4077	1	50946000	+		11618	15736;22760	8128	8136	13224	13224					0.0874858239999412
GLKLKRHMTL	10	Oxidation (M)	_GLKLKRHM(Oxidation (M))TL_		GLKLKRHM(1)TL		GLKLKRHM(62)TL	0	0	1			REV__ENST00000375204.2_1_9:100053158-100058044:+|nuORF	REV__ENST00000375204.2_1_9:100053158-100058044:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.9122314453125	3	404.913025	1211.71725	-0.012951	-5.244E-06	-2.44	-0.00098797	-2.4529	-0.00099321	404.9119506129139	30.734	0.95654	30.737	30.36	31.317	0.0037212					58	21	5	0	0	0	0.42897	1	2060	2060		61.691	6.6074	1	2307500	+		11619	25808	8129	8137	13225	13225		401			0.11985704578955847
GLKLNHKKLFA	11	Unmodified	_GLKLNHKKLFA_					0	0	0			REV__nc|ENSG00000119689|P36957-2|DLST	REV__nc|ENSG00000119689|P36957-2|DLST	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.25	3	423.599435	1267.77648	-1.87	-0.00079214	-1.9005	-0.00080506	-3.7705	-0.0015972	423.59865828900547	107.37	0.50064	107.41	107.33	107.83	0.036125					19	11	2	0	0	0	0.1767	1	11470	11470		18.531	0	1	74924	+		11620	18372	8130	8138	13226	13226					0.15329923864783268
GLKRFFSK	8	Unmodified	_GLKRFFSK_					0	0	0		ENST00000527278.5_1_7:64388059-64388128:+|nuORF	ENST00000527278.5_1_7:64388059-64388128:+|nuORF	ENST00000527278.5_1_7:64388059-64388128:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7957458496094	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.87064	1	4566	4566		29.15	0.89528	1	781720			11621	13281	8131	8139	13227	13227					0.08446074267999393
GLKRFFSK	8	Unmodified	_GLKRFFSK_					0	0	0		ENST00000527278.5_1_7:64388059-64388128:+|nuORF	ENST00000527278.5_1_7:64388059-64388128:+|nuORF	ENST00000527278.5_1_7:64388059-64388128:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7959289550781	2	491.795269	981.575986	-0.0088364	-4.3457E-06	1.0535	0.0005181	1.0447	0.00051376	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.90983	1	4723	4723		42.396	1.618	1	782460			11622	13281	8131	8139	13228	13228					0.08446074267999393
GLKRFFSK	8	Unmodified	_GLKRFFSK_					0	0	0		ENST00000527278.5_1_7:64388059-64388128:+|nuORF	ENST00000527278.5_1_7:64388059-64388128:+|nuORF	ENST00000527278.5_1_7:64388059-64388128:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79522705078125	2	491.795269	981.575986	-0.035071	-1.7248E-05	1.1757	0.00057819	1.1406	0.00056094	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.7961	1	4821	4821		17.365	0.89182	1	1625300			11623	13281	8131	8139	13229	13229					0.08446074267999393
GLKRFFSK	8	Unmodified	_GLKRFFSK_					0	0	0		ENST00000527278.5_1_7:64388059-64388128:+|nuORF	ENST00000527278.5_1_7:64388059-64388128:+|nuORF	ENST00000527278.5_1_7:64388059-64388128:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79571533203125	2	491.795269	981.575986	-2.0878	-0.0010268	2.9764	0.0014638	0.88855	0.00043698	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.87922	1	5011	5011		31.955	0	1	1484300			11624	13281	8131	8139	13230	13230					0.08446074267999393
GLKSPAKH	8	Unmodified	_GLKSPAKH_					0	0	0			REV__nc|ENSG00000164741|Q96QB1-6|DLC1	REV__nc|ENSG00000164741|Q96QB1-6|DLC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2972412109375	2	419.250695	836.486836	0.28514	0.00011954	-2.1116	-0.00088531	-1.8265	-0.00076576	419.2494942541316	63.605	0.5133	64.16	63.961	64.474	0.5545					15	11	2	0	0	0	0.4196	1	6852	6852		42.474	33.652	1	46530	+		11625	29993	8132	8140	13231	13231					0.06205239308462751
GLKSPEVL	8	Unmodified	_GLKSPEVL_					0	0	0			REV__ENSG00000165983|ENST00000535784|PTER	REV__ENSG00000165983|ENST00000535784|PTER	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7512512207031	2	421.752736	841.490919	-1.7782	-0.00074997	0.91991	0.00038797	-0.85831	-0.000362	421.75218958440666	77.386	3.85	77.511	77.102	80.952	0.12485					260	132	4	0	0	0	0.87922	1	7303	7303		31.955	5.1588	1	434130	+		11626	21238	8133	8141	13232	13232					0.06383284011531032
GLKVGFNWLP	10	Unmodified	_GLKVGFNWLP_					0	0	0		ENST00000424458.5_1_20:34243158-34252800:-|nuORF	ENST00000424458.5_1_20:34243158-34252800:-|nuORF	ENST00000424458.5_1_20:34243158-34252800:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	565.8042602539062	2	565.821484	1129.62842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.75	1	115.75	115.25	116.25	0								0	0	0	0.45132	1	11891	11891		16.473	0.83134	1				11627	11516	8134	8142	13233	13233					0.06878612610921664
GLKVIDPRKAL	11	Unmodified	_GLKVIDPRKAL_					0	0	0			REV__ENST00000415259.5_2_3:51706056-51706149:+|nuORF	REV__ENST00000415259.5_2_3:51706056-51706149:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9288635253906	3	403.92744	1208.76049	0.5143	0.00020774	4.1381	0.0016715	4.6524	0.0018792	403.92898888715627	45.158	1.872	45.621	44.495	46.367	0.46313					165	45	4	0	0	0	0.77803	1	4078	4078		15.921	1.6774	1	5214800	+		11628	26419	8135	8143	13234	13234					0.16446217627890292
GLLAAPVLCT	10	Unmodified	_GLLAAPVLCT_					0	0	0			REV__ENSG00000185818|ENST00000423729|NAT8L	REV__ENSG00000185818|ENST00000423729|NAT8L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2779846191406	2	479.275521	956.536489	1.0158	0.00048684	3.1082	0.0014897	4.1239	0.0019765	479.27692974068503	87.133	2.5482	87.579	87.224	89.772	0.44629					117	61	3	0	0	0	0.84112	1	10205	10205		37.159	4.3467	1	776520	+		11629	22796	8136	8144	13235	13235					0.05648186202256511
GLLAAVAALL	10	Unmodified	_GLLAAVAALL_					0	0	0		ENST00000514023.5_1_3:125743683-125802950:-|nuORF;nc|ENSG00000114544|Q96GZ6-8|SLC41A3;nc|ENSG00000114544|Q96GZ6-6|SLC41A3;nc|ENSG00000114544|Q96GZ6-7|SLC41A3;nc|ENSG00000114544|Q96GZ6-4|SLC41A3;nc|ENSG00000114544|Q96GZ6-3|SLC41A3;nc|ENSG00000114544|Q96GZ6-5|SLC41A3;ENSG00000114544|ENST00000360370|SLC41A3;nc|ENSG00000114544|Q96GZ6-2|SLC41A3;nc|ENSG00000114544|Q96GZ6|SLC41A3	ENST00000514023.5_1_3:125743683-125802950:-|nuORF	ENST00000514023.5_1_3:125743683-125802950:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30108642578125	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.85976	1	2023	2023		35.201	0	1	1715600			11630	2778	8137	8145	13236	13236					0.1262842283365444
GLLAGALALL	10	Unmodified	_GLLAGALALL_					0	0	0		ENST00000533146.5_1_15:40979267-40987285:-|nuORF	ENST00000533146.5_1_15:40979267-40987285:-|nuORF	ENST00000533146.5_1_15:40979267-40987285:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3006286621094	2	456.299853	910.585153	0.25824	0.00011784	2.0816	0.00094982	2.3398	0.0010677	456.3006554004226	45.028	1.9814	45.077	44.089	46.07	0.048996					97	49	3	0	0	0	0.85976	1	3269	3269		35.201	1.6851	1	456360			11631	13393	8138	8146	13237	13237					0.1262842283365444
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7852783203125	2	406.783839	811.553125	-0.34246	-0.00013931	4.1924	0.0017054	3.85	0.0015661	406.78540084150717	29.66	1.7951	29.616	28.901	30.696	-0.043095					140	52	4	0	0	0	0.83466	1	1618	1618		23.037	1.3344	1	985720			11632	6821	8139	8147	13238	13238					0.13981055150509292
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.78533935546875	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.86791	1	1868	1868		28.254	1.4582	1	1953100			11633	6821	8139	8147	13239	13239					0.13981055150509292
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7851867675781	2	406.783839	811.553125	2.7329	0.0011117	1.0571	0.00043001	3.79	0.0015417	406.7841375125675	29.651	1.9122	29.636	28.895	30.807	-0.015167					147	57	4	0	0	0	0.82464	1	1569	1569		21.702	6.0661	1	914260			11634	6821	8139	8147	13240	13240					0.13981055150509292
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852478027344	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.81548	1	1750	1750		20.482	1.1219	1	1965300			11635	6821	8139	8147	13241	13241					0.13981055150509292
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78509521484375	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.81548	1	1260	1260		20.482	6.7065	1	1410200			11636	6821	8139	8147	13242	13242					0.13981055150509292
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7847900390625	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.80706	1	1761	1761		19.36	4.6959	1	1756100			11637	6821	8139	8147	13243	13243					0.13981055150509292
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852783203125	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.935	1	32.046	31.546	32.546	0.11117								0	0	0	0.30125	1	1483	1483		20.482	1.1219	1				11638	6821	8139	8147	13244	13244					0.13981055150509292
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7853088378906	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.86791	3	1459	1459;1463;1528		28.254	1.4582	1	1817700			11639	6821	8139	8147	13245;13246;13247	13245					0.13981055150509292
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78515625	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.81724	1	1778	1778		14.664	0.88877	1	1879900			11640	6821	8139	8147	13248	13248					0.13981055150509292
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7853698730469	2	406.783839	811.553125	0.13384	5.4446E-05	3.7055	0.0015073	3.8393	0.0015618	406.7852062914835	29.439	1.7033	29.41	28.91	30.613	-0.029207					106	38	4	0	0	0	0.86791	1	1886	1886		28.254	7.7724	1	2367100			11641	6821	8139	8147	13249	13249					0.13981055150509292
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78509521484375	2	406.783839	811.553125	0.34779	0.00014148	3.2583	0.0013254	3.6061	0.0014669	406.7850428339316	31.533	1.6322	31.64	30.856	32.488	0.10707					116	37	4	0	0	0	0.82464	1	2138	2138		21.702	2.3424	1	5012000			11642	6821	8139	8147	13250	13250					0.13981055150509292
GLLAIVKV	8	Unmodified	_GLLAIVKV_					0	0	0		ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.785400390625	2	406.783839	811.553125	0.94675	0.00038512	2.7522	0.0011195	3.699	0.0015047	406.78484451151587	33.529	1.369	33.798	33.413	34.781	0.26929					111	32	4	0	0	0	0.88915	1	2510	2510		35.201	9.7505	1	7385300			11643	6821	8139	8147	13251	13251					0.13981055150509292
GLLALLGPA	9	Unmodified	_GLLALLGPA_					0	0	0		ENSG00000124098|ENST00000371384|FAM210B	ENSG00000124098|ENST00000371384|FAM210B	ENSG00000124098|ENST00000371384|FAM210B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2669677734375	2	412.765646	823.516739	-1.9024	-0.00078523	4.0039	0.0016527	2.1015	0.00086745	412.7675544540149	40.173	1.81	40.179	39.296	41.106	0.0065002					141	57	4	0	0	0	0.72098	1	2450	2450		39.021	1.993	1	726100			11644	3303	8140	8148	13252	13252					0.0979217825380374
GLLALLLLPRM	11	Unmodified	_GLLALLLLPRM_					0	0	0			REV__ENSG00000083444|ENST00000196061|PLOD1	REV__ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9300842285156	3	403.929905	1208.76789	2.3249	0.0009391	-2.9274	-0.0011825	-0.60253	-0.00024338	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.78683	1	3919	3919		14.086	0	1	2948200	+		11645	16853	8141	8149	13253	13253					0.17185233903933295
GLLALLLLPRM	11	Unmodified	_GLLALLLLPRM_					0	0	0			REV__ENSG00000083444|ENST00000196061|PLOD1	REV__ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.3890380859375	2	605.391219	1208.76789	0.26185	0.00015852	-2.5775	-0.0015604	-2.3157	-0.0014019	605.389725051937	44.911	0.88356	44.843	44.352	45.235	-0.06863					42	20	3	0	0	0	0.69931	1	3196	3196		21.96	0	1	391520	+		11646	16853	8141	8149	13254	13254					0.17185233903933295
GLLALLLLPRM	11	Unmodified	_GLLALLLLPRM_					0	0	0			REV__ENSG00000083444|ENST00000196061|PLOD1	REV__ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9287109375	3	403.929905	1208.76789	0.25224	0.00010189	-3.7332	-0.001508	-3.481	-0.0014061	403.92827500047315	43.269	1.3362	43.703	43.17	44.506	0.4334					104	32	4	0	0	0	0.73621	1	3891	3891		25.126	3.3456	1	3935700	+		11647	16853	8141	8149	13255	13255					0.17185233903933295
GLLAPLTAI	9	Unmodified	_GLLAPLTAI_					0	0	0			REV__ENST00000472157.1_1_1:46806507-46807258:+|nuORF	REV__ENST00000472157.1_1_1:46806507-46807258:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7798156738281	2	434.778754	867.542954	0.065326	2.8402E-05	2.9647	0.001289	3.03	0.0013174	434.77998820567853	59.638	2.2284	59.606	58.812	61.04	-0.031731					117	63	3	0	0	0	0.7932	1	5776	5776		25.45	6.0902	1	254430	+		11648	27254	8142	8150	13256	13256					0.10388447425270897
GLLAPLTAI	9	Unmodified	_GLLAPLTAI_					0	0	0			REV__ENST00000472157.1_1_1:46806507-46807258:+|nuORF	REV__ENST00000472157.1_1_1:46806507-46807258:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7802734375	2	434.778754	867.542954	0.18498	8.0427E-05	2.9584	0.0012863	3.1434	0.0013667	434.7799222967292	39.501	1.6389	39.589	38.953	40.592	0.088375					151	45	4	0	0	0	0.7932	1	2368	2368		26.796	1.3459	1	4736600	+		11649	27254	8142	8150	13257	13257					0.10388447425270897
GLLAPLTAI	9	Unmodified	_GLLAPLTAI_					0	0	0			REV__ENST00000472157.1_1_1:46806507-46807258:+|nuORF	REV__ENST00000472157.1_1_1:46806507-46807258:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.7932	1	1777	1777		25.45	3.7478	1	2158200	+		11650	27254	8142	8150	13258	13258					0.10388447425270897
GLLAQPLL	8	Unmodified	_GLLAQPLL_					0	0	0			REV__ENST00000545712.6_1_12:109994590-109994683:-|nuORF	REV__ENST00000545712.6_1_12:109994590-109994683:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2675476074219	2	412.765646	823.516739	-0.52852	-0.00021815	2.9286	0.0012088	2.4001	0.00099068	412.76723094642836	48.755	3.2946	48.662	47.534	50.828	-0.093178					192	86	3	0	0	0	0.82464	1	3632	3632		21.702	0	1	594400	+		11651	28529	8143	8151	13259	13259					0.09792178253815109
GLLARCNP	8	Unmodified	_GLLARCNP_					0	0	0			REV__ENSG00000189067|ENST00000622633|LITAF	REV__ENSG00000189067|ENST00000622633|LITAF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5926513671875	2	422.228905	842.443257	-1.6686	-0.00070453	0.80366	0.00033933	-0.86493	-0.0003652	422.22916934261553	54.681	0.67278	54.681	54.326	54.998	0					37	26	2	0	0	0	0.4196	1	4616	4616		28.254	14.479	1	186880	+		11652	23062	8144	8152	13260	13260					0.015733065396716484
GLLARSRAS	9	Unmodified	_GLLARSRAS_					0	0	0		ENST00000284061.7_2_17:54911541-54912223:+|nuORF	ENST00000284061.7_2_17:54911541-54912223:+|nuORF	ENST00000284061.7_2_17:54911541-54912223:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7773132324219	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.205	1	80.205	79.705	80.705	0								0	0	0	0.28223	1	7397	7397		37.812	2.1932	1				11653	9643	8145	8153	13261	13261					0.07307411740180214
GLLARSRAS	9	Unmodified	_GLLARSRAS_					0	0	0		ENST00000284061.7_2_17:54911541-54912223:+|nuORF	ENST00000284061.7_2_17:54911541-54912223:+|nuORF	ENST00000284061.7_2_17:54911541-54912223:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7775573730469	2	465.777608	929.540663	-0.1189	-5.538E-05	0.19446	9.0574E-05	0.07556	3.5194E-05	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.73802	1	7839	7839		37.812	7.3079	1	345200			11654	9643	8145	8153	13262	13262					0.07307411740180214
GLLARSRAS	9	Unmodified	_GLLARSRAS_					0	0	0		ENST00000284061.7_2_17:54911541-54912223:+|nuORF	ENST00000284061.7_2_17:54911541-54912223:+|nuORF	ENST00000284061.7_2_17:54911541-54912223:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7773132324219	2	465.777608	929.540663	-0.30744	-0.0001432	0.44439	0.00020699	0.13694	6.3785E-05	465.7776434703856	79.401	2.1188	79.95	79.065	81.184	0.54945					96	49	3	0	0	0	0.7932	1	9140	9140		25.574	0.12388	1	297690			11655	9643	8145	8153	13263	13263					0.07307411740180214
GLLAVGVVP	9	Unmodified	_GLLAVGVVP_					0	0	0		ENST00000462238.5_1_22:51222198-51222276:+|nuORF	ENST00000462238.5_1_22:51222198-51222276:+|nuORF	ENST00000462238.5_1_22:51222198-51222276:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2684326171875	2	412.765646	823.516739	0.8823	0.00036418	0.81659	0.00033706	1.6989	0.00070124	412.7668384055558	39.31	1.1423	39.322	38.717	39.86	0.011173					50	26	3	0	0	0	0.78292	1	2726	2726		29.842	3.0454	1	209500			11656	12039	8146	8154	13264	13264					0.09792178253815109
GLLAVGVVP	9	Unmodified	_GLLAVGVVP_					0	0	0		ENST00000462238.5_1_22:51222198-51222276:+|nuORF	ENST00000462238.5_1_22:51222198-51222276:+|nuORF	ENST00000462238.5_1_22:51222198-51222276:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76593017578125	2	412.765646	823.516739	1.0742	0.00044338	1.0077	0.00041595	2.0819	0.00085933	412.7659693172007	40.207	1.4192	40.217	39.687	41.106	0.0092812					79	35	3	0	0	0	0.78292	1	2994	2994		29.842	0	1	573960			11657	12039	8146	8154	13265	13265					0.09792178253815109
GLLAVGVVP	9	Unmodified	_GLLAVGVVP_					0	0	0		ENST00000462238.5_1_22:51222198-51222276:+|nuORF	ENST00000462238.5_1_22:51222198-51222276:+|nuORF	ENST00000462238.5_1_22:51222198-51222276:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.76531982421875	2	412.765646	823.516739	-1.338	-0.00055229	3.9737	0.0016402	2.6357	0.0010879	412.76710873657004	40.683	0.90184	41.075	40.723	41.625	0.39209					60	25	3	0	0	0	0.72098	1	3509	3509		39.021	0	1	2574200			11658	12039	8146	8154	13266	13266					0.09792178253815109
GLLAVGVVP	9	Unmodified	_GLLAVGVVP_					0	0	0		ENST00000462238.5_1_22:51222198-51222276:+|nuORF	ENST00000462238.5_1_22:51222198-51222276:+|nuORF	ENST00000462238.5_1_22:51222198-51222276:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	412.765646	823.516739	-1.5143	-0.00062506	4.6087	0.0019023	3.0944	0.0012773	412.7674039715743	40.698	1.9873	41.288	40.835	42.822	0.58915	0.068069	0.0005921	NaN	39.021	73	54	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3111800			11659	12039	8146	8154							0.09792178253815109
GLLAWRPG	8	Unmodified	_GLLAWRPG_					0	0	0		nc|ENSG00000142513|Q9BZG2-2|ACP4;ENSG00000142513|ENST00000270593|ACP4	nc|ENSG00000142513|Q9BZG2-2|ACP4	nc|ENSG00000142513|Q9BZG2-2|ACP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25213623046875	2	435.253237	868.491922	-1.5606	-0.00067925	-2.838	-0.0012352	-4.3985	-0.0019145	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.87276	1	7953	7953		29.842	1.5873	1	3322700			11660	4565	8147	8155	13267	13267					0.0524154317108696
GLLCGPRQ	8	Unmodified	_GLLCGPRQ_					0	0	0		ENST00000415602.5_3_20:62694892-62695267:+|nuORF	ENST00000415602.5_3_20:62694892-62695267:+|nuORF	ENST00000415602.5_3_20:62694892-62695267:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.2275695800781	2	422.228905	842.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.921	1	61.95	61.45	62.45	0.029575								0	0	0	0.29199	1	5778	5778		29.842	1.9593	1				11661	11380	8148	8156	13268	13268					0.015733065396716484
GLLCGPRQ	8	Unmodified	_GLLCGPRQ_					0	0	0		ENST00000415602.5_3_20:62694892-62695267:+|nuORF	ENST00000415602.5_3_20:62694892-62695267:+|nuORF	ENST00000415602.5_3_20:62694892-62695267:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2276306152344	2	422.228905	842.443257	-0.9195	-0.00038824	-1.8299	-0.00077262	-2.7494	-0.0011609	422.2280277960838	61.182	0.60796	61.19	60.59	61.198	0.0081177					32	24	2	0	0	0	0.86791	1	5319	5319		28.254	4.0515	1	378620			11662	11380	8148	8156	13269	13269					0.015733065396716484
GLLCLVVY	8	Unmodified	_GLLCLVVY_					0	0	0			REV__nc|ENSG00000211752|A0A0K0K1C4|TRBV27	REV__nc|ENSG00000211752|A0A0K0K1C4|TRBV27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2548828125	2	440.254057	878.493561	-0.15822	-6.9655E-05	3.0468	0.0013414	2.8886	0.0012717	440.25531510537985	67.089	0.61319	67.105	66.828	67.441	0.016205					41	26	2	0	0	0	0.88393	1	6308	6308		33.493	0	1	138210	+		11663	30186	8149	8157	13270	13270					0.04945416144835235
GLLDLLVLA	9	Unmodified	_GLLDLLVLA_					0	0	0			REV__ENST00000372748.7_1_1:40776930-40778265:-|nuORF	REV__ENST00000372748.7_1_1:40776930-40778265:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8006286621094	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	1	2871	2871		26.796	2.5934	1	489490	+		11664	25731	8150	8158	13271	13271					0.119050031137931
GLLDLSRPI	9	Unmodified	_GLLDLSRPI_					0	0	0			REV__nc|ENSG00000111802|O95551-3|TDP2	REV__nc|ENSG00000111802|O95551-3|TDP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2961120605469	2	492.297842	982.581131	0.010803	5.3184E-06	-0.45723	-0.0002251	-0.44643	-0.00021978	492.2974871625459	54.049	1.8007	54.456	53.861	55.661	0.40663					79	42	3	0	0	0	0.71772	1	5549	5549		39.253	6.4404	1	1817100	+		11665	17897	8151	8159	13272	13272					0.08914333339930636
GLLDNVLTLVI	11	Unmodified	_GLLDNVLTLVI_					0	0	0			REV__ENSG00000182405|ENST00000397766|PGBD4	REV__ENSG00000182405|ENST00000397766|PGBD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	585.36328125	2	585.360639	1168.70673	2.7241	0.0015946	4.0506	0.0023711	6.7747	0.0039656	585.3631050744117	97.599	1.1009	97.544	97.187	98.288	-0.055542					64	25	3	0	0	0	0.69995	1	10520	10520		31.53	4.4825	1	488060	+		11666	22522	8152	8160	13273	13273					0.12912000405503932
GLLEAPEAI	9	Unmodified	_GLLEAPEAI_					0	0	0			REV__ENST00000441363.1_1_6:73973084-74008823:+|nuORF	REV__ENST00000441363.1_1_6:73973084-74008823:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.75567626953125	2	456.755475	911.496398	-1.6814	-0.00076797	2.6309	0.0012017	0.94951	0.00043369	456.75620952490556	72.619	1.1177	73.005	72.417	73.535	0.38582					61	26	4	0	0	0	0.69914	1	8133	8133		40.573	6.4001	1	566860	+		11667	26755	8153	8161	13274	13274					0.037109628033249464
GLLEAPEAI	9	Unmodified	_GLLEAPEAI_					0	0	0			REV__ENST00000441363.1_1_6:73973084-74008823:+|nuORF	REV__ENST00000441363.1_1_6:73973084-74008823:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7557067871094	2	456.755475	911.496398	-0.064177	-2.9313E-05	0.50026	0.0002285	0.43608	0.00019918	456.75543897284	72.478	0.82823	73.028	72.647	73.476	0.55008					52	19	4	0	0	0	0.3636	1	8152	8152		60.294	2.4827	1	663940	+		11668	26755	8153	8161	13275	13275					0.037109628033249464
GLLEAPEAI	9	Unmodified	_GLLEAPEAI_					0	0	0			REV__ENST00000441363.1_1_6:73973084-74008823:+|nuORF	REV__ENST00000441363.1_1_6:73973084-74008823:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	456.755475	911.496398	-1.1879	-0.0005426	8.8441	0.0040396	7.6561	0.003497	456.7574438855365	73.08	0.28015	73.209	73.012	73.293	0.12921	0.12817	0.0064707	NaN	60.294	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31769	+		11669	26755	8153	8161							0.037109628033249464
GLLEKIATPK	10	Unmodified	_GLLEKIATPK_					0	0	0		nc|ENSG00000197448|Q9Y2Q3-4|GSTK1;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;ENSG00000197448|ENST00000358406|GSTK1;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;ENST00000473649.1_1_7:142961996-142965927:+|nuORF	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.3348999023438	2	535.334424	1068.6543	-0.65731	-0.00035188	0.32599	0.00017451	-0.33132	-0.00017736	535.3344358614712	45.57	0.69036	46.041	45.767	46.457	0.47139					48	16	4	0	0	0	3.3559E-17	5	4249	4227;4238;4249;4262;4277		173.39	77.577	1	3848500			11670	8166	8154	8162	13276;13277;13278;13279;13280	13278					0.12271462062540195
GLLEKIATPK	10	Unmodified	_GLLEKIATPK_					0	0	0		nc|ENSG00000197448|Q9Y2Q3-4|GSTK1;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;ENSG00000197448|ENST00000358406|GSTK1;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;ENST00000473649.1_1_7:142961996-142965927:+|nuORF	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.3343505859375	2	535.334424	1068.6543	-0.90655	-0.00048531	0.54412	0.00029128	-0.36244	-0.00019403	535.3345470196653	45.43	0.79708	46.326	46.046	46.843	0.89542					52	19	4	0	0	0	7.4855E-07	5	4238	4217;4227;4238;4250;4264		150.36	76.107	1	3880700			11671	8166	8154	8162	13281;13282;13283;13284;13285	13283					0.12271462062540195
GLLEQLVKLRA	11	Unmodified	_GLLEQLVKLRA_					0	0	0		ENST00000394164.5_1_14:73603593-73603752:+|nuORF	ENST00000394164.5_1_14:73603593-73603752:+|nuORF	ENST00000394164.5_1_14:73603593-73603752:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.9324951171875	3	413.930962	1238.77106	0.12638	5.2312E-05	4.0621	0.0016814	4.1884	0.0017337	413.93257989675	45.178	2.8999	45.16	43.533	46.433	-0.018585					218	68	4	0	0	0	0.75121	1	3493	3493		21.78	3.2494	1	518900			11672	11060	8155	8163	13286	13286					0.1612220028232514
GLLFFTKLQKG	11	Unmodified	_GLLFFTKLQKG_					0	0	0			REV__ENSG00000183778|ENST00000684187|B3GALT5	REV__ENSG00000183778|ENST00000684187|B3GALT5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3740234375	2	626.376623	1250.73869	0.42243	0.0002646	-0.34529	-0.00021628	0.077147	4.8323E-05	626.3767951946339	44.871	0.91894	44.92	44.571	45.49	0.048996					39	21	3	0	0	0	0.72106	1	3182	3182		28.081	2.5074	1	198720	+		11673	22626	8156	8164	13287	13287					0.123354128793153
GLLFFVSVI	9	Unmodified	_GLLFFVSVI_					0	0	0		ENST00000382361.7_1_7:5646078-5646261:+|nuORF	ENST00000382361.7_1_7:5646078-5646261:+|nuORF	ENST00000382361.7_1_7:5646078-5646261:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.80047607421875	2	497.802229	993.589904	-1.7144	-0.00085342	-2.6026	-0.0012956	-4.317	-0.002149	497.8007994469304	69.145	0.62259	69.178	68.849	69.472	0.033005					71	28	3	0	0	0	0.58151	1	6629	6629		47.916	7.343	1	392890			11674	10976	8157	8165	13288	13288					0.09285306976426
GLLFIFLLKCV	11	Unmodified	_GLLFIFLLKCV_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.385986328125	2	633.388145	1264.76174	-0.79334	-0.00050249	-3.7629	-0.0023833	-4.5562	-0.0028858	633.3858115557084	49.904	1.4514	49.904	49.018	50.469	0					50	33	2	0	0	0	0.74022	1	3939	3939		27.882	22.662	1	147250	+		11675	22567	8158	8166	13289	13289					0.13994715672424718
GLLFIFLLKCV	11	Unmodified	_GLLFIFLLKCV_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.591796875	3	422.594522	1264.76174	-0.72913	-0.00030813	-3.5139	-0.001485	-4.2431	-0.0017931	422.59296810914583	52.674	1.95	52.65	51.696	53.646	-0.023849					74	47	2	0	0	0	0.72739	1	4764	4764		27.047	3.6694	1	181930	+		11676	22567	8158	8166	13290	13290					0.13994715672424718
GLLFNILEP	9	Unmodified	_GLLFNILEP_					0	0	0			REV__nc|ENSG00000087269|P78316-2|NOP14	REV__nc|ENSG00000087269|P78316-2|NOP14	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2974853515625	2	508.294768	1014.57498	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.763	1	60.879	60.379	61.379	0.11676								0	0	0	0.28772	1	5282	5282		35.618	7.736	1		+		11677	16930	8159	8167	13291	13291					0.06827815108420054
GLLFPSAAH	9	Unmodified	_GLLFPSAAH_					0	0	0		ENSG00000059804|ENST00000075120|SLC2A3;ENST00000469295.1_1_12:8074011-8075632:-|nuORF	ENSG00000059804|ENST00000075120|SLC2A3	ENSG00000059804|ENST00000075120|SLC2A3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7931213378906	2	456.750527	911.486502	0.17906	8.1787E-05	-3.7348	-0.0017059	-3.5557	-0.0016241	456.7491307123034	36.273	0.17562	36.377	36.313	36.489	0.10306					8	6	2	0	0	0	0.17327	1	1993	1993		42.474	0	1	90026			11678	1058	8160	8168	13292	13292					0.027218195886121066
GLLGALCPHS	10	Unmodified	_GLLGALCPHS_					0	0	0			REV__nc|ENSG00000203684|B1ANH7|IBA57-DT	REV__nc|ENSG00000203684|B1ANH7|IBA57-DT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.2878723144531	2	484.25512	966.495686	-0.75282	-0.00036455	-2.5808	-0.0012498	-3.3337	-0.0016143	484.25379953796505	94.935	0.54759	94.981	94.661	95.209	0.046173					16	12	2	0	0	0	0.37624	1	9974	9974		24.203	17.89	1	52413	+		11679	30153	8161	8169	13293	13293					0.01109844882626021
GLLGGRLNES	10	Unmodified	_GLLGGRLNES_					0	0	0		ENST00000255189.7_1_5:78326753-78329103:-|nuORF	ENST00000255189.7_1_5:78326753-78329103:-|nuORF	ENST00000255189.7_1_5:78326753-78329103:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.7842102050781	2	508.28018	1014.54581	-0.12807	-6.5097E-05	4.0398	0.0020533	3.9117	0.0019882	508.28210982040144	21.685	0.90281	21.62	21.308	22.211	-0.064743					74	30	3	0	0	0	0.8608	1	694	694		34.173	0.65696	1	261030			11680	9329	8162	8170	13294	13294					0.03911670812135526
GLLGGSGRRP	10	Unmodified	_GLLGGSGRRP_					0	0	0		ENST00000594807.5_1_19:14640508-14674579:+|nuORF	ENST00000594807.5_1_19:14640508-14674579:+|nuORF	ENST00000594807.5_1_19:14640508-14674579:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.287353515625	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.98	1	76.113	75.613	76.613	0.13325								0	0	0	0.45132	1	7092	7092		37.812	0.65241	1				11681	14321	8163	8171	13295	13295					0.06602814114478406
GLLGKRIL	8	Unmodified	_GLLGKRIL_					0	0	0			REV__ENST00000610262.1_1_2:86422776-86422875:+|nuORF	REV__ENST00000610262.1_1_2:86422776-86422875:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3002624511719	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.81548	1	6723	6723		20.482	2.1574	1	1852500	+		11682	29427	8164	8172	13296	13296					0.14627262273359065
GLLGKVGHFV	10	Unmodified	_GLLGKVGHFV_					0	0	0			REV__ENST00000552415.1_1_12:107109174-107109339:-|nuORF	REV__ENST00000552415.1_1_12:107109174-107109339:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.80908203125	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.85694	1	4249	4249		21.96	2.5999	1	926440	+		11683	28624	8165	8173	13297	13297					0.09042343439477918
GLLGKVGHFV	10	Unmodified	_GLLGKVGHFV_					0	0	0			REV__ENST00000552415.1_1_12:107109174-107109339:-|nuORF	REV__ENST00000552415.1_1_12:107109174-107109339:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8073120117188	2	513.808377	1025.6022	0.35777	0.00018383	0.79125	0.00040655	1.149	0.00059038	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.86452	1	3830	3830		30.504	3.7075	1	1443600	+		11684	28624	8165	8173	13298	13298					0.09042343439477918
GLLGLIPVS	9	Unmodified	_GLLGLIPVS_					0	0	0		ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7802429199219	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.67235	1	2709	2709		42.474	5.446	1	2581600			11685	8869	8166	8174	13299	13299					0.10388447425282266
GLLGLIPVS	9	Unmodified	_GLLGLIPVS_					0	0	0		ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7795104980469	2	434.778754	867.542954	-0.14252	-6.1964E-05	3.501	0.0015222	3.3585	0.0014602	434.78017454908985	35.066	1.262	35.054	34.849	36.111	-0.012203					110	29	4	0	0	0	0.7932	1	2230	2230		24.203	0	1	2804500			11686	8869	8166	8174	13300	13300					0.10388447425282266
GLLGLIPVS	9	Unmodified	_GLLGLIPVS_					0	0	0		ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7802734375	2	434.778754	867.542954	-1.3516	-0.00058764	3.9223	0.0017053	2.5707	0.0011177	434.78034506978366	39.667	1.8641	39.623	39.121	40.985	-0.043697					176	46	5	0	0	0	0.69914	1	2810	2810		40.573	1.7665	1	3943300			11687	8869	8166	8174	13301	13301					0.10388447425282266
GLLGLIPVS	9	Unmodified	_GLLGLIPVS_					0	0	0		ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77960205078125	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.77546	1	3332	3332		31.955	2.1133	1	2165200			11688	8869	8166	8174	13302	13302					0.10388447425282266
GLLGLIPVS	9	Unmodified	_GLLGLIPVS_					0	0	0		ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	434.778754	867.542954	-0.10818	-4.7034E-05	3.1846	0.0013846	3.0765	0.0013376	434.7800213108271	39.594	1.7303	39.546	38.941	40.672	-0.04789					162	53	5	0	0	0	0.69914	1	2399	2399		40.573	3.5441	1	5065300			11689	8869	8166	8174	13303	13303					0.10388447425282266
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.76702880859375	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.72098	1	2312	2312		39.021	12.225	1	1649400			11690	11103	8167	8175	13304	13304					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7667541503906	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.55559	3	2637	2637;2656;2674		49.211	19.369	1	795210			11691	11103	8167	8175	13305;13306;13307	13305					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7671813964844	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.55559	1	2863	2863		49.211	10.189	1	681490			11692	11103	8167	8175	13308	13308					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7664489746094	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.932	1	43.932	43.432	44.432	0								0	0	0	0.2792	1	3150	3150		39.021	9.18	1				11693	11103	8167	8175	13309	13309					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.76556396484375	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.439	1	40.408	39.908	40.908	-0.030991								0	0	0	0.30219	1	2881	2881		29.842	1.5873	1				11694	11103	8167	8175	13310	13310					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.76654052734375	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.975	1	41.944	41.444	42.444	-0.030991								0	0	0	0.30219	1	3103	3103		29.842	4.3914	1				11695	11103	8167	8175	13311	13311					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7671813964844	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.78292	2	2584	2584;2633		29.842	3.0454	1	2097300			11696	11103	8167	8175	13312;13313	13312					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76629638671875	2	412.765646	823.516739	-1.3459	-0.00055553	3.4065	0.0014061	2.0606	0.00085056	412.76701040612045	40.372	1.7448	40.328	39.579	41.324	-0.043694					94	45	3	0	0	0	0.72098	2	2963	2963;2986		39.021	9.18	1	625910			11697	11103	8167	8175	13314;13315	13314					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7670593261719	2	412.765646	823.516739	-1.2234	-0.00050499	3.8954	0.0016079	2.6719	0.0011029	412.7673243915212	41.944	1.8566	41.905	41.33	43.186	-0.038223					75	44	2	0	0	0	0.55559	3	3267	3166;3202;3267		49.211	12.225	1	796850			11698	11103	8167	8175	13316;13317;13318	13318					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76715087890625	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.72098	1	2503	2503		39.021	9.18	1	2034000			11699	11103	8167	8175	13319	13319					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7662353515625	2	412.765646	823.516739	1.0742	0.00044338	1.0077	0.00041595	2.0819	0.00085933	412.7659693172007	40.207	1.4192	40.217	39.687	41.106	0.0092812					79	35	3	0	0	0	0.72098	2	2895	2895;2919		39.021	14.819	1	573960			11700	11103	8167	8175	13320;13321	13320					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7668762207031	2	412.765646	823.516739	1.4126	0.00058306	1.8694	0.00077163	3.282	0.0013547	412.7662658707051	42.038	1.4358	42.042	41.461	42.897	0.003418					59	34	2	0	0	0	0.78292	2	3139	3139;3239		29.842	8.1392	1	683700			11701	11103	8167	8175	13322;13323	13322					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7668762207031	2	412.765646	823.516739	-1.9024	-0.00078523	4.0039	0.0016527	2.1015	0.00086745	412.7675544540149	40.173	1.81	40.179	39.296	41.106	0.0065002					141	57	4	0	0	0	0.78292	1	2513	2513		29.842	1.5873	1	726100			11702	11103	8167	8175	13324	13324					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7664489746094	2	412.765646	823.516739	-1.8992	-0.00078392	4.1525	0.001714	2.2533	0.0009301	412.76765198426614	41.794	3.0272	41.798	40.935	43.962	0.0043983					161	84	4	0	0	0	0.36201	4	2776	2764;2776;2788;2810		60.404	21.382	1	640430			11703	11103	8167	8175	13325;13326;13327;13328	13326					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7668762207031	2	412.765646	823.516739	-1.8859	-0.00077844	3.9578	0.0016337	2.0719	0.00085522	412.7678129581843	48.855	3.3742	48.881	47.541	50.915	0.025574					176	94	2	0	0	0	0.72098	1	3752	3752		39.021	9.18	1	621000			11704	11103	8167	8175	13329	13329					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7668762207031	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.55559	3	2758	2734;2758;2804		49.211	12.225	1	669780			11705	11103	8167	8175	13330;13331;13332	13331					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7670593261719	2	412.765646	823.516739	0.29216	0.00012059	0.97906	0.00040412	1.2712	0.00052472	412.7669032783796	51.677	2.3681	51.737	50.932	53.3	0.059719					122	72	2	0	0	0	0.7932	1	4079	4079		21.702	6.0661	1	250130			11706	11103	8167	8175	13333	13333					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7669372558594	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.72098	3	2189	2189;2196;2208		39.021	9.18	1	1619400			11707	11103	8167	8175	13334;13335;13336	13334					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7666015625	2	412.765646	823.516739	-0.21056	-8.6912E-05	2.569	0.0010604	2.3584	0.00097348	412.76685422643334	40.116	1.6377	40.068	39.082	40.719	-0.04789					115	51	3	0	0	0	0.72098	1	2515	2515		39.021	8.5179	1	699640			11708	11103	8167	8175	13337	13337					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7666931152344	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.55559	2	2758	2723;2758		49.211	15.695	1	818920			11709	11103	8167	8175	13338;13339	13339					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7669372558594	2	412.765646	823.516739	-0.52852	-0.00021815	2.9286	0.0012088	2.4001	0.00099068	412.76723094642836	48.755	3.2946	48.662	47.534	50.828	-0.093178					192	86	3	0	0	0	0.78292	3	3746	3746;3758;3770		29.842	4.3914	1	594400			11710	11103	8167	8175	13340;13341;13342	13340					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.268310546875	2	412.765646	823.516739	-0.62558	-0.00025822	2.0435	0.0008435	1.4179	0.00058528	412.7673203899957	51.451	2.0511	51.366	50.837	52.888	-0.084538					105	61	2	0	0	0	0.7932	1	4104	4104		21.702	1.2205	1	311840			11711	11103	8167	8175	13343	13343					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7669677734375	2	412.765646	823.516739	1.2585	0.00051947	2.4286	0.0010024	3.6871	0.0015219	412.7665201070099	37.01	2.3211	37.292	35.703	38.024	0.28173					152	57	4	0	0	0	0.78292	1	2917	2917		29.842	0	1	3102100			11712	11103	8167	8175	13344	13344					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7669677734375	2	412.765646	823.516739	-0.47942	-0.00019789	3.3109	0.0013666	2.8315	0.0011687	412.7670483281277	39.807	1.8963	40.175	38.803	40.699	0.36797					121	45	4	0	0	0	0.21125	5	3370	3285;3335;3346;3359;3370		72.62	23.178	1	816160			11713	11103	8167	8175	13345;13346;13347;13348;13349	13349					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7652282714844	2	412.765646	823.516739	-1.338	-0.00055229	3.9737	0.0016402	2.6357	0.0010879	412.76710873657004	40.683	0.90184	41.075	40.723	41.625	0.39209					60	25	3	0	0	0	0.78292	1	3521	3521		29.842	3.0454	1	2574200			11714	11103	8167	8175	13350	13350					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.76702880859375	2	412.765646	823.516739	1.2488	0.00051545	2.3587	0.00097359	3.6075	0.001489	412.7664969922496	36.891	1.9427	37.376	36.231	38.174	0.48581					136	47	4	0	0	0	0.7932	1	2962	2962		21.702	6.0661	1	3061300			11715	11103	8167	8175	13351	13351					0.09792178253792372
GLLGLLAAP	9	Unmodified	_GLLGLLAAP_					0	0	0		ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	412.765646	823.516739	-1.2434	-0.00051322	4.2802	0.0017667	3.0369	0.0012535	412.7671776494771	41.506	1.2576	41.92	41.647	42.904	0.4139	0.067967	0.00087721	NaN	60.404	51	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	806590			11716	11103	8167	8175							0.09792178253792372
GLLGLLVK	8	Unmodified	_GLLGLLVK_					0	0	0			REV__ENSG00000197635|ENST00000360534|DPP4	REV__ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7855224609375	2	406.783839	811.553125	0.13384	5.4446E-05	3.7055	0.0015073	3.8393	0.0015618	406.7852062914835	29.439	1.7033	29.41	28.91	30.613	-0.029207					106	38	4	0	0	0	0.81548	1	1911	1911		20.482	0	1	2367100	+		11717	23254	8168	8176	13352	13352					0.13981055150509292
GLLGLRLHER	10	Unmodified	_GLLGLRLHER_					0	0	0			REV__ENSG00000096401|ENST00000371477|CDC5L	REV__ENSG00000096401|ENST00000371477|CDC5L	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3540649414062	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.97	1	118.94	118.44	119.44	-0.024208								0	0	0	0.45132	1	13182	13182		27.882	7.8855	1		+		11718	17075	8169	8177	13353	13353					0.11863607136797327
GLLGLRLHER	10	Unmodified	_GLLGLRLHER_					0	0	0			REV__ENSG00000096401|ENST00000371477|CDC5L	REV__ENSG00000096401|ENST00000371477|CDC5L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3531494140625	2	582.354014	1162.69348	2.7406	0.001596	-3.1524	-0.0018358	-0.4118	-0.00023981	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.86348	1	12682	12682		31.53	5.9558	1	7862700	+		11719	17075	8169	8177	13354	13354					0.11863607136797327
GLLGPARVD	9	Unmodified	_GLLGPARVD_					0	0	0			REV__ENST00000576083.5_1_17:5973812-5983707:+|nuORF	REV__ENST00000576083.5_1_17:5973812-5983707:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.2606506347656	2	449.261259	896.507966	0.086224	3.8737E-05	-2.0246	-0.00090958	-1.9384	-0.00087084	449.2601788042096	68.841	0.73721	68.874	68.516	69.253	0.033005					47	30	2	0	0	0	0.76996	1	6590	6590		33.516	3.0119	1	184640	+		11720	28991	8170	8178	13355	13355					0.05557204617332445
GLLGRRVWRQL	11	Unmodified	_GLLGRRVWRQL_					0	0	0		ENST00000552897.5_1_12:113659258-113698227:+|nuORF	ENST00000552897.5_1_12:113659258-113698227:+|nuORF	ENST00000552897.5_1_12:113659258-113698227:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9430236816406	3	451.945717	1352.81532	-1.2962	-0.0005858	-4.4264	-0.0020005	-5.7226	-0.0025863	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.76892	1	4296	4296		17.833	1.3033	1	734340			11721	13687	8171	8179	13356	13356					0.15302649219165687
GLLGVRPGFP	10	Unmodified	_GLLGVRPGFP_					0	0	0			REV__ENST00000511987.5_1_17:49109002-49124111:-|nuORF	REV__ENST00000511987.5_1_17:49109002-49124111:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.7995300292969	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.86589	1	3312	3312		29.15	4.9468	1	412810	+		11722	27975	8172	8180	13357	13357					0.08122056922422871
GLLHEAFSN	9	Unmodified	_GLLHEAFSN_					0	0	0			REV__nc|ENSG00000187912|Q6ZS10-3|CLEC17A	REV__nc|ENSG00000187912|Q6ZS10-3|CLEC17A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	495.2213134765625	2	494.248349	986.482145	0.49664	0.00024546	1.0843	0.00053593	1.581	0.0007814	494.24881036388985	67.163	1.3361	67.29	66.974	68.31	0.12748					83	52	2	0	0	0	0.20789	1	6104	6104		19.997	0	1	100280	+		11723	30114	8173	8181	13358	13358					-0.011636896249569872
GLLHGLAVSF	10	Unmodified	_GLLHGLAVSF_					0	0	0			REV__ENSG00000167580|ENST00000199280|AQP2	REV__ENSG00000167580|ENST00000199280|AQP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2278747558594	2	507.292559	1012.57057	-0.097368	-4.9394E-05	-3.8172	-0.0019364	-3.9145	-0.0019858	507.2905343736535	29.904	0.50576	29.861	29.634	30.14	-0.043095					14	10	2	0	0	0	0.37624	1	1583	1583		45.952	14.422	1	36191	+		11724	21398	8174	8182	13359	13359					0.06478350685517853
GLLIELDLP	9	Unmodified	_GLLIELDLP_					0	0	0			REV__ENST00000462139.1_1_1:247460900-247461185:-|nuORF	REV__ENST00000462139.1_1_1:247460900-247461185:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7950744628906	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.27	1	59.27	58.77	59.77	0								0	0	0	0.31472	1	5151	5151		25.45	1.2474	1		+		11725	27046	8175	8183	13360	13360					0.08312395388577443
GLLIELDLP	9	Unmodified	_GLLIELDLP_					0	0	0			REV__ENST00000462139.1_1_1:247460900-247461185:-|nuORF	REV__ENST00000462139.1_1_1:247460900-247461185:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7961730957031	2	491.794601	981.574648	0.019467	9.5736E-06	2.4962	0.0012276	2.5157	0.0012372	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.77546	1	4443	4443		31.955	6.5047	1	310050	+		11726	27046	8175	8183	13361	13361					0.08312395388577443
GLLIELDLP	9	Unmodified	_GLLIELDLP_					0	0	0			REV__ENST00000462139.1_1_1:247460900-247461185:-|nuORF	REV__ENST00000462139.1_1_1:247460900-247461185:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79547119140625	2	491.794601	981.574648	-0.75954	-0.00037354	2.9319	0.0014419	2.1724	0.0010684	491.7959244094971	46.601	1.9125	46.572	45.843	47.756	-0.028782					158	52	4	0	0	0	0.7932	1	3925	3925		25.45	3.4903	1	3015000	+		11727	27046	8175	8183	13362	13362					0.08312395388577443
GLLIELDLP	9	Unmodified	_GLLIELDLP_					0	0	0			REV__ENST00000462139.1_1_1:247460900-247461185:-|nuORF	REV__ENST00000462139.1_1_1:247460900-247461185:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7957458496094	2	491.794601	981.574648	-0.36021	-0.00017715	2.6619	0.0013091	2.3017	0.001132	491.79587618632917	55.368	1.5692	55.341	54.702	56.271	-0.027279					123	47	4	0	0	0	0.69914	1	5006	5006		40.573	10.069	1	1374900	+		11728	27046	8175	8183	13363	13363					0.08312395388577443
GLLIELDLP	9	Unmodified	_GLLIELDLP_					0	0	0			REV__ENST00000462139.1_1_1:247460900-247461185:-|nuORF	REV__ENST00000462139.1_1_1:247460900-247461185:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7967224121094	2	491.794601	981.574648	-0.70573	-0.00034708	2.912	0.0014321	2.2063	0.001085	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.7932	1	4485	4485		25.45	0	1	772710	+		11729	27046	8175	8183	13364	13364					0.08312395388577443
GLLIESRR	8	Unmodified	_GLLIESRR_					0	0	0			REV__ENSG00000148343|ENST00000684074|MIGA2;REV__ENST00000483458.1_1_9:131831674-131832729:+|nuORF	REV__ENSG00000148343|ENST00000684074|MIGA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2878112792969	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.87064	1	10373	10373		29.15	1.2673	1	50843000	+		11730	20109;27490	8176	8184	13365	13365					0.08748582400005489
GLLIFFFLQVI	11	Unmodified	_GLLIFFFLQVI_					0	0	0			REV__ENSG00000205330|ENST00000642104|OR6C1	REV__ENSG00000205330|ENST00000642104|OR6C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2677307128906	3	437.268804	1308.78458	1.1681	0.00051075	-3.3265	-0.0014546	-2.1585	-0.00094384	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.78085	1	4556	4556		15.333	1.8252	1	4130900	+		11731	23553	8177	8185	13366	13366					0.14254058061555952
GLLIILVK	8	Unmodified	_GLLIILVK_					0	0	0		ENST00000392710.8_1_17:66526103-66526435:+|nuORF	ENST00000392710.8_1_17:66526103-66526435:+|nuORF	ENST00000392710.8_1_17:66526103-66526435:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78021240234375	2	434.815139	867.615725	-0.62669	-0.00027249	3.1562	0.0013724	2.5295	0.0010999	434.8164145905105	34.665	0.18414	34.608	34.447	34.632	-0.056385					5	3	2	0	0	0	0.4196	1	2174	2174		19.36	0	1	17100			11732	11031	8178	8186	13367	13367					0.1766220121870674
GLLILLSK	8	Unmodified	_GLLILLSK_					0	0	0		ENST00000317594.6_1_11:117693022-117695420:-|nuORF	ENST00000317594.6_1_11:117693022-117695420:-|nuORF	ENST00000317594.6_1_11:117693022-117695420:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.7503356933594	2	428.796946	855.57934	0.034691	1.4876E-05	0.25491	0.0001093	0.2896	0.00012418	428.7982917681224	35.053	0.48523	34.998	34.878	35.363	-0.055149					25	20	2	0	0	0	0.4196	1	1859	1859		35.618	0	1	56811			11733	9994	8179	8187	13368	13368					0.14577324321999185
GLLILLSK	8	Unmodified	_GLLILLSK_					0	0	0		ENST00000317594.6_1_11:117693022-117695420:-|nuORF	ENST00000317594.6_1_11:117693022-117695420:-|nuORF	ENST00000317594.6_1_11:117693022-117695420:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7505187988281	2	428.796946	855.57934	1.3507	0.00057917	1.6538	0.00070914	3.0045	0.0012883	428.7976902868955	34.173	1.607	34.478	33.49	35.097	0.30495					49	38	2	0	0	0	0.4196	1	2611	2611		10.866	0	1	166210			11734	9994	8179	8187	13369	13369					0.14577324321999185
GLLILLSK	8	Unmodified	_GLLILLSK_					0	0	0		ENST00000317594.6_1_11:117693022-117695420:-|nuORF	ENST00000317594.6_1_11:117693022-117695420:-|nuORF	ENST00000317594.6_1_11:117693022-117695420:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	428.796946	855.57934	-1.9592	-0.00084012	3.9888	0.0017104	2.0295	0.00087026	428.7992501466535	34.477	1.7285	34.477	33.956	35.684	0	-0.090003	0.00042219	NaN	10.866	74	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68076			11735	9994	8179	8187							0.14577324321999185
GLLILLSK	8	Unmodified	_GLLILLSK_					0	0	0		ENST00000317594.6_1_11:117693022-117695420:-|nuORF	ENST00000317594.6_1_11:117693022-117695420:-|nuORF	ENST00000317594.6_1_11:117693022-117695420:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	428.796946	855.57934	-0.13828	-5.9295E-05	3.8846	0.0016657	3.7463	0.0016064	428.79850319346707	35.325	1.6174	35.313	34.036	35.654	-0.012203	0.15761	0.00017752	NaN	35.618	67	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63040			11736	9994	8179	8187							0.14577324321999185
GLLILLSK	8	Unmodified	_GLLILLSK_					0	0	0		ENST00000317594.6_1_11:117693022-117695420:-|nuORF	ENST00000317594.6_1_11:117693022-117695420:-|nuORF	ENST00000317594.6_1_11:117693022-117695420:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	428.796946	855.57934	-0.64587	-0.00027695	4.3509	0.0018656	3.705	0.0015887	428.79869750397097	34.801	2.0456	34.745	33.422	35.468	-0.056385	0.1781	0.00073272	NaN	10.866	77	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60955			11737	9994	8179	8187							0.14577324321999185
GLLIVGLID	9	Unmodified	_GLLIVGLID_					0	0	0			REV__ENST00000463438.5_1_3:14693292-14703332:+|nuORF	REV__ENST00000463438.5_1_3:14693292-14703332:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7921142578125	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.7932	1	3232	3232		25.45	4.9683	1	652510	+		11738	27075	8180	8188	13370	13370					0.10984716596760791
GLLIVLPTLI	10	Unmodified	_GLLIVLPTLI_					0	0	0			REV__ENSG00000172940|ENST00000311856|SLC22A13	REV__ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.36083984375	2	526.359911	1050.70527	-1.5421	-0.00081169	4.0218	0.0021169	2.4797	0.0013052	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.85939	1	2181	2181		23.042	0	1	788470	+		11739	21870	8181	8189	13371	13371					0.1819441110740172
GLLIVLPTLI	10	Unmodified	_GLLIVLPTLI_					0	0	0			REV__ENSG00000172940|ENST00000311856|SLC22A13	REV__ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3607788085938	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.85694	1	2362	2362		21.96	5.4867	1	781950	+		11740	21870	8181	8189	13372	13372					0.1819441110740172
GLLIVLPTLI	10	Unmodified	_GLLIVLPTLI_					0	0	0			REV__ENSG00000172940|ENST00000311856|SLC22A13	REV__ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3597412109375	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.85694	1	2412	2412		21.96	0	1	2871800	+		11741	21870	8181	8189	13373	13373					0.1819441110740172
GLLIVLPTLI	10	Unmodified	_GLLIVLPTLI_					0	0	0			REV__ENSG00000172940|ENST00000311856|SLC22A13	REV__ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3603515625	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.85939	1	1901	1901		23.042	0	1	1497200	+		11742	21870	8181	8189	13374	13374					0.1819441110740172
GLLIVLPTLI	10	Unmodified	_GLLIVLPTLI_					0	0	0			REV__ENSG00000172940|ENST00000311856|SLC22A13	REV__ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3590087890625	2	526.359911	1050.70527	-0.2233	-0.00011753	2.7139	0.0014285	2.4906	0.0013109	526.3612023516472	37.188	2.125	37.212	36.022	38.147	0.023624					163	60	4	0	0	0	0.84874	1	1991	1991		18.324	0.95945	1	1504200	+		11743	21870	8181	8189	13375	13375					0.1819441110740172
GLLIVLPTLI	10	Unmodified	_GLLIVLPTLI_					0	0	0			REV__ENSG00000172940|ENST00000311856|SLC22A13	REV__ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.361083984375	2	526.359911	1050.70527	0.41493	0.0002184	1.9977	0.0010515	2.4127	0.0012699	526.3608149931753	33.292	1.7707	33.259	32.845	34.615	-0.032677					246	76	5	0	0	0	0.86482	1	1655	1655		25.45	1.2474	1	5110100	+		11744	21870	8181	8189	13376	13376					0.1819441110740172
GLLIVLPTLI	10	Unmodified	_GLLIVLPTLI_					0	0	0			REV__ENSG00000172940|ENST00000311856|SLC22A13	REV__ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3606567382812	2	526.359911	1050.70527	1.057	0.00055634	1.5103	0.00079494	2.5672	0.0013513	526.3605624063631	36.088	1.9344	36.37	35.78	37.714	0.28173					146	47	5	0	0	0	0.86452	1	2788	2788		30.504	0	1	5773200	+		11745	21870	8181	8189	13377	13377					0.1819441110740172
GLLIVLPTLI	10	Unmodified	_GLLIVLPTLI_					0	0	0			REV__ENSG00000172940|ENST00000311856|SLC22A13	REV__ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3600463867188	2	526.359911	1050.70527	1.6664	0.00087713	0.82322	0.00043331	2.4896	0.0013104	526.3602142312507	35.988	1.9361	36.429	35.808	37.744	0.44043					142	47	4	0	0	0	0.86305	1	2872	2872		31.955	0	1	6841400	+		11746	21870	8181	8189	13378	13378					0.1819441110740172
GLLKDTTVNI	10	Unmodified	_GLLKDTTVNI_					0	0	0			REV__ENST00000478711.1_1_6:46854737-46856150:-|nuORF	REV__ENST00000478711.1_1_6:46854737-46856150:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.31396484375	2	537.313689	1072.61282	-0.24714	-0.00013279	-0.20337	-0.00010927	-0.45051	-0.00024207	537.3133643064616	49.552	0.65517	50.012	49.623	50.278	0.45983					30	15	3	0	0	0	0.85981	1	4821	4821		35.152	2.4015	1	930150	+		11747	27388	8182	8190	13379	13379					0.07942281303235177
GLLKGRRWNIP	11	Unmodified	_GLLKGRRWNIP_					0	0	0			REV__ENSG00000198909|ENST00000361733|MAP3K3	REV__ENSG00000198909|ENST00000361733|MAP3K3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2684020996094	3	437.266568	1308.77787	1.2133	0.00053055	1.7295	0.00075624	2.9428	0.0012868	437.2672396896614	50.554	1.7579	50.562	49.504	51.262	0.0077477					187	47	5	0	0	0	0.74022	1	4347	4347		24.232	2.4514	1	3327600	+		11748	23410	8183	8191	13380	13380					0.13583557953552372
GLLKGRRWNIP	11	Unmodified	_GLLKGRRWNIP_					0	0	0			REV__ENSG00000198909|ENST00000361733|MAP3K3	REV__ENSG00000198909|ENST00000361733|MAP3K3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26788330078125	3	437.266568	1308.77787	-0.49223	-0.00021524	3.5152	0.0015371	3.023	0.0013218	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.74022	1	4013	4013		24.232	3.9168	1	3262400	+		11749	23410	8183	8191	13381	13381					0.13583557953552372
GLLKVLQPLV	10	Unmodified	_GLLKVLQPLV_					0	0	0			REV__ENST00000458289.2_1_4:81001192-81001915:+|nuORF	REV__ENST00000458289.2_1_4:81001192-81001915:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.3623046875	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.925	1	41.318	40.818	41.818	0.39209								0	0	0	0.45132	1	3539	3539		16.473	0.83134	1		+		11750	26983	8184	8192	13382	13382					0.17520929338934366
GLLLALLDV	9	Unmodified	_GLLLALLDV_					0	0	0			REV__ENST00000409104.7_1_9:131447369-131447474:+|nuORF	REV__ENST00000409104.7_1_9:131447369-131447474:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.80010986328125	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3471	3471		23.042	1.0826	1	1516700	+		11751	26332	8185	8193	13383	13383					0.11905003113815837
GLLLALLDV	9	Unmodified	_GLLLALLDV_					0	0	0			REV__ENST00000409104.7_1_9:131447369-131447474:+|nuORF	REV__ENST00000409104.7_1_9:131447369-131447474:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.8009033203125	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.69914	2	3805	3805;3817		40.573	0	1	5050800	+		11752	26332	8185	8193	13384;13385	13384					0.11905003113815837
GLLLALLDV	9	Unmodified	_GLLLALLDV_					0	0	0			REV__ENST00000409104.7_1_9:131447369-131447474:+|nuORF	REV__ENST00000409104.7_1_9:131447369-131447474:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.80169677734375	2	463.799686	925.584819	-1.9529	-0.00090576	3.5624	0.0016523	1.6095	0.0007465	463.801178460678	42.067	1.8831	42.764	41.947	43.83	0.69754					154	47	4	0	0	0	0.77546	1	3811	3811		31.955	0	1	6253400	+		11753	26332	8185	8193	13386	13386					0.11905003113815837
GLLLAVAPA	9	Unmodified	_GLLLAVAPA_					0	0	0		ENST00000507735.5_1_4:169799281-169812093:+|nuORF	ENST00000507735.5_1_4:169799281-169812093:+|nuORF	ENST00000507735.5_1_4:169799281-169812093:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7665710449219	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.893	1	41.862	41.362	42.362	-0.030991								0	0	0	0.2792	1	3091	3091		39.021	9.18	1				11754	12963	8186	8194	13387	13387					0.0979217825380374
GLLLAVAPA	9	Unmodified	_GLLLAVAPA_					0	0	0		ENST00000507735.5_1_4:169799281-169812093:+|nuORF	ENST00000507735.5_1_4:169799281-169812093:+|nuORF	ENST00000507735.5_1_4:169799281-169812093:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76702880859375	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.78292	1	2479	2479		29.842	0	1	2034000			11755	12963	8186	8194	13388	13388					0.0979217825380374
GLLLAVAPA	9	Unmodified	_GLLLAVAPA_					0	0	0		ENST00000507735.5_1_4:169799281-169812093:+|nuORF	ENST00000507735.5_1_4:169799281-169812093:+|nuORF	ENST00000507735.5_1_4:169799281-169812093:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2661437988281	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.78292	1	2084	2084		29.842	3.0454	1	1619400			11756	12963	8186	8194	13389	13389					0.0979217825380374
GLLLAVAPA	9	Unmodified	_GLLLAVAPA_					0	0	0		ENST00000507735.5_1_4:169799281-169812093:+|nuORF	ENST00000507735.5_1_4:169799281-169812093:+|nuORF	ENST00000507735.5_1_4:169799281-169812093:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.76654052734375	2	412.765646	823.516739	-1.2498	-0.00051589	3.7774	0.0015592	2.5275	0.0010433	412.7673416302562	39.701	1.53	40.256	39.194	40.724	0.55449					86	35	3	0	0	0	0.78292	1	3311	3311		29.842	0	1	293590			11757	12963	8186	8194	13390	13390					0.0979217825380374
GLLLDLLPE	9	Unmodified	_GLLLDLLPE_					0	0	0			REV__nc|ENSG00000104936|Q09013-12|DMPK	REV__nc|ENSG00000104936|Q09013-12|DMPK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7950439453125	2	491.794601	981.574648	-1.6029	-0.00078829	3.7177	0.0018284	2.1148	0.0010401	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.78536	1	3286	3286		29.15	3.6994	1	603870	+		11758	17489	8187	8195	13391	13391					0.08312395388566074
GLLLEVVGL	9	Unmodified	_GLLLEVVGL_					0	0	0			REV__nc|ENSG00000152939|Q8N4S9-2|MARVELD2	REV__nc|ENSG00000152939|Q8N4S9-2|MARVELD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79266357421875	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.76996	1	2133	2133		33.516	0	1	3484100	+		11759	20321	8188	8196	13392	13392					0.10984716596760791
GLLLEVVGL	9	Unmodified	_GLLLEVVGL_					0	0	0			REV__nc|ENSG00000152939|Q8N4S9-2|MARVELD2	REV__nc|ENSG00000152939|Q8N4S9-2|MARVELD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79302978515625	2	456.791861	911.569169	0.19113	8.7308E-05	2.7762	0.0012681	2.9673	0.0013554	456.7929923736529	37.659	1.0878	37.758	37.313	38.401	0.099277					98	37	4	0	0	0	0.7932	1	2140	2140		19.36	1.0356	1	1361500	+		11760	20321	8188	8196	13393	13393					0.10984716596760791
GLLLEVVGL	9	Unmodified	_GLLLEVVGL_					0	0	0			REV__nc|ENSG00000152939|Q8N4S9-2|MARVELD2	REV__nc|ENSG00000152939|Q8N4S9-2|MARVELD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7915344238281	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.7932	1	2801	2801		25.45	6.0902	1	605230	+		11761	20321	8188	8196	13394	13394					0.10984716596760791
GLLLFSRLFAE	11	Unmodified	_GLLLFSRLFAE_					0	0	0			REV__chr5:135934449-135935320|26|38.96|0.39|6.64|+|1|FBXL21P,FBXL21P|1	REV__chr5:135934449-135935320|26|38.96|0.39|6.64|+|1|FBXL21P,FBXL21P|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5814514160156	3	422.579929	1264.71796	0.70592	0.00029831	4.187	0.0017694	4.893	0.0020677	422.58159999345827	97.435	2.4101	97.596	96.789	99.199	0.16074					159	55	4	0	0	0	0.76322	1	10144	10144		17.167	5.2344	1	461560	+		11762	15847	8189	8197	13395	13395					0.0961882249964674
GLLLGAPLA	9	Unmodified	_GLLLGAPLA_					0	0	0		ENSG00000179588|ENST00000319555|ZFPM1	ENSG00000179588|ENST00000319555|ZFPM1	ENSG00000179588|ENST00000319555|ZFPM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7672119140625	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.7932	1	2828	2828		21.702	0	1	681490			11763	7279	8190	8198	13396	13396					0.0979217825380374
GLLLGAPLA	9	Unmodified	_GLLLGAPLA_					0	0	0		ENSG00000179588|ENST00000319555|ZFPM1	ENSG00000179588|ENST00000319555|ZFPM1	ENSG00000179588|ENST00000319555|ZFPM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.26861572265625	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.78292	1	2316	2316		29.842	0	1	1619400			11764	7279	8190	8198	13397	13397					0.0979217825380374
GLLLIFVVDS	10	Unmodified	_GLLLIFVVDS_					0	0	0		nc|ENSG00000196503|Q6T311-2|ARL9;chr4:56505509-56511185|57|25.4|0.71|5.17|+|ENST00000360096|ARL9,ARL9;nc|ENSG00000196503|Q6T311|ARL9;ENSG00000196503|ENST00000640821|ARL9	nc|ENSG00000196503|Q6T311-2|ARL9	nc|ENSG00000196503|Q6T311-2|ARL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267211914062	2	538.323525	1074.6325	3.4335	0.0018483	2.8142	0.001515	6.2477	0.0033633	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.81018	1	11242	11242		38.806	8.3025	1	75550000			11765	425	8191	8199	13398	13398					0.09816657313990618
GLLLIFVVDS	10	Unmodified	_GLLLIFVVDS_					0	0	0		nc|ENSG00000196503|Q6T311-2|ARL9;chr4:56505509-56511185|57|25.4|0.71|5.17|+|ENST00000360096|ARL9,ARL9;nc|ENSG00000196503|Q6T311|ARL9;ENSG00000196503|ENST00000640821|ARL9	nc|ENSG00000196503|Q6T311-2|ARL9	nc|ENSG00000196503|Q6T311-2|ARL9	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267822265625	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.28	1	113.26	112.76	113.76	-0.024811								0	0	0	0.45132	1	12532	12532		16.473	0.83134	1				11766	425	8191	8199	13399	13399					0.09816657313990618
GLLLIFVVDS	10	Unmodified	_GLLLIFVVDS_					0	0	0		nc|ENSG00000196503|Q6T311-2|ARL9;chr4:56505509-56511185|57|25.4|0.71|5.17|+|ENST00000360096|ARL9,ARL9;nc|ENSG00000196503|Q6T311|ARL9;ENSG00000196503|ENST00000640821|ARL9	nc|ENSG00000196503|Q6T311-2|ARL9	nc|ENSG00000196503|Q6T311-2|ARL9	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3268432617188	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.7	1	113.68	113.18	114.18	-0.024811								0	0	0	0.45132	1	12584	12584		29.15	4.9468	1				11767	425	8191	8199	13400	13400					0.09816657313990618
GLLLIPPK	8	Unmodified	_GLLLIPPK_					0	0	0		ENSG00000139289|ENST00000266671|PHLDA1	ENSG00000139289|ENST00000266671|PHLDA1	ENSG00000139289|ENST00000266671|PHLDA1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	425.7747802734375	2	425.791664	849.568775	-1.2763	-0.00054343	3.8487	0.0016387	2.5724	0.0010953	425.7949651588262	39.081	0.71453	39.034	38.647	39.361	-0.047005					34	16	3	0	0	0	0.4196	1	2768	2768		21.702	0	1	96863			11768	4358	8192	8200	13401	13401					0.13797341667566343
GLLLIPPK	8	Unmodified	_GLLLIPPK_					0	0	0		ENSG00000139289|ENST00000266671|PHLDA1	ENSG00000139289|ENST00000266671|PHLDA1	ENSG00000139289|ENST00000266671|PHLDA1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	425.791664	849.568775	-0.20734	-8.8284E-05	6.2849	0.0026761	6.0775	0.0025878	425.7943317383501	38.414	0.32007	38.756	38.618	38.938	0.34187	-0.11665	0.0024936	NaN	21.702	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98433			11769	4358	8192	8200							0.13797341667566343
GLLLKPQV	8	Unmodified	_GLLLKPQV_					0	0	0		ENST00000533683.6_2_19:14198965-14199232:-|nuORF	ENST00000533683.6_2_19:14198965-14199232:-|nuORF	ENST00000533683.6_2_19:14198965-14199232:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77947998046875	2	434.286746	866.558939	-0.17956	-7.7982E-05	2.6673	0.0011584	2.4877	0.0010804	434.2879390263025	41.663	1.1473	41.618	41.238	42.385	-0.045471					37	30	2	0	0	0	0.4196	1	2738	2738		20.482	0	1	94494			11770	13399	8193	8201	13402	13402					0.12032153662175915
GLLLLAGRWGF	11	Unmodified	_GLLLLAGRWGF_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	601.8585815429688	2	601.855858	1201.69716	-0.18175	-0.00010939	3.7257	0.0022423	3.5439	0.0021329	601.857878566198	103.66	2.1239	103.66	103.29	105.42	0					107	51	3	0	0	0	0.75041	1	10661	10661		21.96	1.1227	1	1055100	+		11771	21984	8194	8202	13403	13403					0.10438276910645072
GLLLLAPSV	9	Unmodified	_GLLLLAPSV_					0	0	0		nc|ENSG00000136827|O14656-2|TOR1A;ENST00000473084.1_1_9:132584712-132586364:-|nuORF;ENSG00000136827|ENST00000351698|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78802490234375	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.7932	1	2684	2684		20.482	1.1219	1	15753000			11772	4139	8195	8203	13404	13404					0.11308733942325944
GLLLLAPSV	9	Unmodified	_GLLLLAPSV_					0	0	0		nc|ENSG00000136827|O14656-2|TOR1A;ENST00000473084.1_1_9:132584712-132586364:-|nuORF;ENSG00000136827|ENST00000351698|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.78778076171875	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.7932	1	3612	3612		26.796	1.3459	1	539980			11773	4139	8195	8203	13405	13405					0.11308733942325944
GLLLLAPSV	9	Unmodified	_GLLLLAPSV_					0	0	0		nc|ENSG00000136827|O14656-2|TOR1A;ENST00000473084.1_1_9:132584712-132586364:-|nuORF;ENSG00000136827|ENST00000351698|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879943847656	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.78851	1	2718	2718		28.254	1.4582	1	14534000			11774	4139	8195	8203	13406	13406					0.11308733942325944
GLLLLAPSV	9	Unmodified	_GLLLLAPSV_					0	0	0		nc|ENSG00000136827|O14656-2|TOR1A;ENST00000473084.1_1_9:132584712-132586364:-|nuORF;ENSG00000136827|ENST00000351698|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7879943847656	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.76402	1	2353	2353		35.201	8.4046	1	11532000			11775	4139	8195	8203	13407	13407					0.11308733942325944
GLLLLAPSV	9	Unmodified	_GLLLLAPSV_					0	0	0		nc|ENSG00000136827|O14656-2|TOR1A;ENST00000473084.1_1_9:132584712-132586364:-|nuORF;ENSG00000136827|ENST00000351698|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7879638671875	2	441.786579	881.558604	-0.54459	-0.00024059	3.5319	0.0015603	2.9873	0.0013197	441.7881167581505	37.981	2.8453	38.294	37.083	39.929	0.31312					193	69	5	0	0	0	0.78851	2	3103	3067;3103		28.254	1.4582	1	61531000			11776	4139	8195	8203	13408;13409	13409					0.11308733942325944
GLLLLAPSV	9	Unmodified	_GLLLLAPSV_					0	0	0		nc|ENSG00000136827|O14656-2|TOR1A;ENST00000473084.1_1_9:132584712-132586364:-|nuORF;ENSG00000136827|ENST00000351698|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7880859375	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.78851	3	3091	3091;3237;3250		28.254	1.4582	1	54520000			11777	4139	8195	8203	13410;13411;13412	13410					0.11308733942325944
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.76702880859375	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.72098	1	2323	2323		39.021	9.18	1	1649400	+		11778	18643	8196	8204	13413	13413					0.0979217825380374
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.26702880859375	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.72098	2	2805	2805;2929		39.021	0	1	681490	+		11779	18643	8196	8204	13414;13415	13414					0.0979217825380374
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7659606933594	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.788	1	40.757	40.257	41.257	-0.030991								0	0	0	0.30219	1	2931	2931		29.842	8.1392	1		+		11780	18643	8196	8204	13416	13416					0.0979217825380374
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7667236328125	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.662	1	41.631	41.131	42.131	-0.030991								0	0	0	0.32542	1	3057	3057		21.702	0	1		+		11781	18643	8196	8204	13417	13417					0.0979217825380374
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7673034667969	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.78292	1	2842	2842		29.842	0	1	669780	+		11782	18643	8196	8204	13418	13418					0.0979217825380374
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7671203613281	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.671	1	37.77	37.27	38.27	0.099277								0	0	0	0.30219	1	2177	2177		29.842	0	1		+		11783	18643	8196	8204	13419	13419					0.0979217825380374
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7668151855469	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.864	1	37.958	37.458	38.458	0.094322								0	0	0	0.30219	1	2203	2203		29.842	0	1		+		11784	18643	8196	8204	13420	13420					0.0979217825380374
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7666015625	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.78292	1	2735	2735		29.842	0	1	818920	+		11785	18643	8196	8204	13421	13421					0.0979217825380374
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7672119140625	2	412.765646	823.516739	0.0029651	1.2239E-06	4.3428	0.0017925	4.3457	0.0017938	412.7672251340711	46.501	1.4809	46.972	46.254	47.735	0.47139					61	35	3	0	0	0	0.78292	1	4376	4376		29.842	0	1	936710	+		11786	18643	8196	8204	13422	13422					0.0979217825380374
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.76715087890625	2	412.765646	823.516739	1.2488	0.00051545	2.3587	0.00097359	3.6075	0.001489	412.7664969922496	36.891	1.9427	37.376	36.231	38.174	0.48581					136	47	4	0	0	0	0.78292	1	2936	2936		29.842	0	1	3061300	+		11787	18643	8196	8204	13423	13423					0.0979217825380374
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	412.765646	823.516739	0.0029651	1.2239E-06	4.3428	0.0017925	4.3457	0.0017938	412.7672251340711	46.501	1.4809	46.972	46.254	47.735	0.47139	-0.050063	-0.00019756	NaN	29.842	61	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	936710	+		11788	18643	8196	8204							0.0979217825380374
GLLLLGPAA	9	Unmodified	_GLLLLGPAA_					0	0	0			REV__ENSG00000125430|ENST00000360954|HS3ST3B1	REV__ENSG00000125430|ENST00000360954|HS3ST3B1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	412.765646	823.516739	-0.77621	-0.00032039	4.829	0.0019932	4.0528	0.0016729	412.7674527612678	46.156	1.0446	47.072	46.468	47.512	0.91593	0.050063	0.00020385	NaN	29.842	61	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1334300	+		11789	18643	8196	8204							0.0979217825380374
GLLLLLEAA	9	Unmodified	_GLLLLLEAA_					0	0	0			REV__ENSG00000101230|ENST00000262487|ISM1	REV__ENSG00000101230|ENST00000262487|ISM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7912292480469	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.7932	1	3238	3238		19.36	1.995	1	608260	+		11790	17259	8197	8205	13424	13424					0.10984716596749422
GLLLLLLLSP	10	Unmodified	_GLLLLLLLSP_					0	0	0			REV__ENSG00000153246|ENST00000283243|PLA2R1	REV__ENSG00000153246|ENST00000283243|PLA2R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3610229492188	2	526.359911	1050.70527	0.086645	4.5607E-05	2.1771	0.0011459	2.2637	0.0011915	526.3609236587663	33.368	2.0596	33.371	32.762	34.822	0.0030785					171	48	5	0	0	0	0.8488	1	2001	2001		17.365	0	1	3096800	+		11791	20341	8198	8206	13425	13425					0.18194411107424457
GLLLLLLLSP	10	Unmodified	_GLLLLLLLSP_					0	0	0			REV__ENSG00000153246|ENST00000283243|PLA2R1	REV__ENSG00000153246|ENST00000283243|PLA2R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3609619140625	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.85939	1	2482	2482		23.042	1.0826	1	781950	+		11792	20341	8198	8206	13426	13426					0.18194411107424457
GLLLLLLLSP	10	Unmodified	_GLLLLLLLSP_					0	0	0			REV__ENSG00000153246|ENST00000283243|PLA2R1	REV__ENSG00000153246|ENST00000283243|PLA2R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.361083984375	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.8488	1	2257	2257		17.365	0	1	2871800	+		11793	20341	8198	8206	13427	13427					0.18194411107424457
GLLLLLLLSP	10	Unmodified	_GLLLLLLLSP_					0	0	0			REV__ENSG00000153246|ENST00000283243|PLA2R1	REV__ENSG00000153246|ENST00000283243|PLA2R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3611450195312	2	526.359911	1050.70527	-0.47346	-0.00024921	2.7476	0.0014462	2.2741	0.001197	526.3612126681783	35.14	1.5704	35.146	34.727	36.297	0.0063934					147	36	5	0	0	0	0.85438	1	2141	2141		16.473	0	1	2682400	+		11794	20341	8198	8206	13428	13428					0.18194411107424457
GLLLLLLLSP	10	Unmodified	_GLLLLLLLSP_					0	0	0			REV__ENSG00000153246|ENST00000283243|PLA2R1	REV__ENSG00000153246|ENST00000283243|PLA2R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3609008789062	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.84874	1	2413	2413		18.324	0.95945	1	2706400	+		11795	20341	8198	8206	13429	13429					0.18194411107424457
GLLLLLLLSP	10	Unmodified	_GLLLLLLLSP_					0	0	0			REV__ENSG00000153246|ENST00000283243|PLA2R1	REV__ENSG00000153246|ENST00000283243|PLA2R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.36083984375	2	526.359911	1050.70527	0.25296	0.00013315	2.2538	0.0011863	2.5068	0.0013195	526.3609378895691	36.94	1.9118	37.039	36.051	37.962	0.099277					159	60	4	0	0	0	0.8488	1	2078	2078		17.365	0	1	1522000	+		11796	20341	8198	8206	13430	13430					0.18194411107424457
GLLLLLLPLS	10	Unmodified	_GLLLLLLPLS_					0	0	0		nc|ENSG00000163453|Q16270-2|IGFBP7;ENSG00000163453|ENST00000295666|IGFBP7	REV__nc|ENSG00000170476|Q8WU39-5|MZB1	REV__nc|ENSG00000170476|Q8WU39-5|MZB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3592529296875	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.84874	1	2388	2388		18.324	0.95945	1	2871800			11797	5799	8199	8207	13431	13431					0.18194411107424457
GLLLLLMLVP	10	Unmodified	_GLLLLLMLVP_					0	0	0			REV__ENSG00000173369|ENST00000509305|C1QB	REV__ENSG00000173369|ENST00000509305|C1QB	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.3656005859375	2	541.356314	1080.69807	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.81	1	112.75	112.25	113.25	-0.067215								0	0	0	0.45132	1	12247	12247		12.959	1.4482	1		+		11798	21917	8200	8208	13432	13432					0.1609535523532486
GLLLLLTT	8	Unmodified	_GLLLLLTT_					0	0	0		ENST00000380680.4_1_13:30423810-30423975:-|nuORF	ENST00000380680.4_1_13:30423810-30423975:-|nuORF	ENST00000380680.4_1_13:30423810-30423975:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.22821044921875	2	422.281129	842.547705	-0.079978	-3.3773E-05	-3.6014	-0.0015208	-3.6813	-0.0015546	422.27894855340645	62.294	0.1076	62.261	62.172	62.279	-0.033169					6	4	2	0	0	0	0.4196	1	5894	5894		13.775	0	1	30132			11799	10929	8201	8209	13433	13433					0.1201333156803912
GLLLLLVPLT	10	Unmodified	_GLLLLLVPLT_					0	0	0			REV__ENST00000082468.11_1_6:26405791-26410201:+|nuORF	REV__ENST00000082468.11_1_6:26405791-26410201:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3609619140625	2	526.359911	1050.70527	-1.5923	-0.00083811	3.7176	0.0019568	2.1254	0.0011187	526.3617428180578	33.41	1.543	33.41	33.111	34.654	0					182	44	5	0	0	0	0.86452	1	1835	1835		30.504	6.3009	1	7280900	+		11800	16263	8202	8210	13434	13434					0.1819441110740172
GLLLLPEK	8	Unmodified	_GLLLLPEK_					0	0	0		nc|ENSG00000074755|O43149-3|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;ENSG00000074755|ENST00000381638|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7879638671875	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.87276	1	2742	2742		29.842	1.5873	1	15753000			11801	1313	8203	8211	13435	13435					0.11308733942325944
GLLLLPEK	8	Unmodified	_GLLLLPEK_					0	0	0		nc|ENSG00000074755|O43149-3|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;ENSG00000074755|ENST00000381638|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879638671875	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.87276	1	2753	2753		29.842	1.5873	1	14534000			11802	1313	8203	8211	13436	13436					0.11308733942325944
GLLLLPEK	8	Unmodified	_GLLLLPEK_					0	0	0		nc|ENSG00000074755|O43149-3|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;ENSG00000074755|ENST00000381638|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7880554199219	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.87276	1	2369	2369		29.842	1.5873	1	12467000			11803	1313	8203	8211	13437	13437					0.11308733942325944
GLLLLPEK	8	Unmodified	_GLLLLPEK_					0	0	0		nc|ENSG00000074755|O43149-3|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;ENSG00000074755|ENST00000381638|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.787841796875	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.9159	1	3362	3362		44.531	2.0566	1	4170800			11804	1313	8203	8211	13438	13438					0.11308733942325944
GLLLLPPGA	9	Unmodified	_GLLLLPPGA_					0	0	0			REV__nc|ENSG00000173928|Q6NVH7|SWSAP1	REV__nc|ENSG00000173928|Q6NVH7|SWSAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.7748107910156	2	425.773471	849.53239	0.17703	7.5374E-05	3.2935	0.0014023	3.4705	0.0014777	425.7747914132181	38.924	1.3455	39.012	38.418	39.764	0.088371					149	38	5	0	0	0	0.72098	1	2312	2312		39.021	3.8208	1	14185000	+		11805	21965	8204	8212	13439	13439					0.10160464770854105
GLLLLPPGA	9	Unmodified	_GLLLLPPGA_					0	0	0			REV__nc|ENSG00000173928|Q6NVH7|SWSAP1	REV__nc|ENSG00000173928|Q6NVH7|SWSAP1	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	425.773471	849.53239	-1.8968	-0.00080761	5.4771	0.002332	3.5803	0.0015244	425.7757459718879	38.927	1.3704	38.927	38.3	39.67	0	-0.062791	0.0011303	NaN	39.021	136	33	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15324000	+		11806	21965	8204	8212							0.10160464770854105
GLLLLPPGA	9	Unmodified	_GLLLLPPGA_					0	0	0			REV__nc|ENSG00000173928|Q6NVH7|SWSAP1	REV__nc|ENSG00000173928|Q6NVH7|SWSAP1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	425.773471	849.53239	-1.2819	-0.00054579	4.8587	0.0020687	3.5768	0.0015229	425.77547999054576	39.062	1.546	39.015	38.33	39.876	-0.047001	0.025297	0.00060365	NaN	39.021	137	35	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16398000	+		11807	21965	8204	8212							0.10160464770854105
GLLLLPPGA	9	Unmodified	_GLLLLPPGA_					0	0	0			REV__nc|ENSG00000173928|Q6NVH7|SWSAP1	REV__nc|ENSG00000173928|Q6NVH7|SWSAP1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	425.773471	849.53239	-1.7983	-0.00076567	5.2367	0.0022296	3.4384	0.001464	425.77561723340915	39.116	2.5214	39.126	37.352	39.873	0.010708	0.13646	0.00092555	NaN	39.021	188	73	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13623000	+		11808	21965	8204	8212							0.10160464770854105
GLLLLPPGA	9	Unmodified	_GLLLLPPGA_					0	0	0			REV__nc|ENSG00000173928|Q6NVH7|SWSAP1	REV__nc|ENSG00000173928|Q6NVH7|SWSAP1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	425.773471	849.53239	-0.22834	-9.7219E-05	3.7298	0.0015881	3.5015	0.0014908	425.77496787601876	38.455	1.3684	38.796	38.418	39.787	0.34187	-0.19355	-0.0003576	NaN	39.021	106	32	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17151000	+		11809	21965	8204	8212							0.10160464770854105
GLLLPLILSL	10	Unmodified	_GLLLPLILSL_					0	0	0		ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3607788085938	2	526.359911	1050.70527	-1.5421	-0.00081169	4.0218	0.0021169	2.4797	0.0013052	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.84874	1	2274	2274		18.324	0	1	788470			11810	10244	8205	8213	13440	13440					0.18194411107424457
GLLLPLILSL	10	Unmodified	_GLLLPLILSL_					0	0	0		ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.361328125	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.86482	1	2134	2134		25.45	7.1258	1	5020100			11811	10244	8205	8213	13441	13441					0.18194411107424457
GLLLPLILSL	10	Unmodified	_GLLLPLILSL_					0	0	0		ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.36083984375	2	526.359911	1050.70527	0.25296	0.00013315	2.2538	0.0011863	2.5068	0.0013195	526.3609378895691	36.94	1.9118	37.039	36.051	37.962	0.099277					159	60	4	0	0	0	0.88541	1	2132	2132		11.511	3.8207	1	1522000			11812	10244	8205	8213	13442	13442					0.18194411107424457
GLLLPLILSL	10	Unmodified	_GLLLPLILSL_					0	0	0		ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3611450195312	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.84874	1	1799	1799		18.324	1.8513	1	1221500			11813	10244	8205	8213	13443	13443					0.18194411107424457
GLLLPRRG	8	Unmodified	_GLLLPRRG_					0	0	0			REV__ENSG00000182858|ENST00000330817|ALG12	REV__ENSG00000182858|ENST00000330817|ALG12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9395446777344	2	441.287611	880.56067	-0.66873	-0.0002951	-4.4472	-0.0019625	-5.1159	-0.0022576	441.28446205561875	56.123	0.23444	56.087	55.9	56.135	-0.036823					10	8	2	0	0	0	0.4196	1	4734	4734		13.775	0	1	56921	+		11814	22555	8206	8214	13444	13444					0.11561207470799673
GLLLPTLAA	9	Unmodified	_GLLLPTLAA_					0	0	0			REV__ENST00000472658.1_1_1:16270204-16270420:-|nuORF	REV__ENST00000472658.1_1_1:16270204-16270420:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7796936035156	2	434.778754	867.542954	-0.23402	-0.00010175	2.835	0.0012326	2.601	0.0011308	434.77987896985167	43.157	1.7547	43.107	42.38	44.135	-0.050308					136	44	4	0	0	0	0.76996	1	3077	3077		33.516	5.2613	1	2479900	+		11815	27266	8207	8215	13445	13445					0.10388447425270897
GLLLPTLAA	9	Unmodified	_GLLLPTLAA_					0	0	0			REV__ENST00000472658.1_1_1:16270204-16270420:-|nuORF	REV__ENST00000472658.1_1_1:16270204-16270420:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77838134765625	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.7932	1	3587	3587		24.203	3.7209	1	6824500	+		11816	27266	8207	8215	13446	13446					0.10388447425270897
GLLLPTPAKLN	11	Unmodified	_GLLLPTPAKLN_					0	0	0		ENST00000414286.1_1_9:35753089-35756568:-|nuORF	ENST00000414286.1_1_9:35753089-35756568:-|nuORF	ENST00000414286.1_1_9:35753089-35756568:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8535766601562	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.7342	1	11365	11365		25.574	3.6142	1	50786000			11817	11364	8208	8216	13447	13447					0.1340743747093711
GLLLRLVPV	9	Unmodified	_GLLLRLVPV_					0	0	0			REV__ENST00000338130.6_1_6:3000212-3002332:+|nuORF	REV__ENST00000338130.6_1_6:3000212-3002332:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.832275390625	2	490.33677	978.658987	0.47623	0.00023352	-2.2299	-0.0010934	-1.7536	-0.00085987	490.33551948829506	65.625	0.53388	65.75	65.504	66.038	0.12532					39	28	2	0	0	0	0.20789	1	5851	5851		7.6903	3.705	1	866770	+		11818	25212	8209	8217	13448	13448					0.16880390995981998
GLLLRPVAPL	10	Unmodified	_GLLLRPVAPL_					0	0	0		ENSG00000102981|ENST00000458121|PARD6A;nc|ENSG00000102981|Q9NPB6|PARD6A	ENSG00000102981|ENST00000458121|PARD6A	ENSG00000102981|ENST00000458121|PARD6A	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8268432617188	2	524.847502	1047.68045	-0.63932	-0.00033554	-2.2525	-0.0011822	-2.8919	-0.0015178	524.8467735574951	99.49	0.53752	99.49	99.222	99.759	0					24	12	3	0	0	0	0.37624	1	10055	10055		21.96	9.0007	1	151280			11819	2040	8210	8218	13449	13449					0.158517760246923
GLLLRSLDP	9	Unmodified	_GLLLRSLDP_					0	0	0			REV__ENSG00000132768|ENST00000255108|DPH2	REV__ENSG00000132768|ENST00000255108|DPH2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.296875	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.155	1	64.121	63.621	64.621	-0.034256								0	0	0	0.30053	1	6112	6112		30.504	3.8107	1		+		11820	19029	8211	8219	13450	13450					0.08914333339930636
GLLLSLLLLP	10	Unmodified	_GLLLSLLLLP_					0	0	0		ENSG00000100263|ENST00000216085|RHBDD3;ENST00000496342.1_1_22:29656732-29660364:-|nuORF	ENSG00000100263|ENST00000216085|RHBDD3	ENSG00000100263|ENST00000216085|RHBDD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3592529296875	2	526.359911	1050.70527	-0.016718	-8.7995E-06	2.2479	0.0011832	2.2312	0.0011744	526.3609420824897	35.324	1.4285	35.312	34.729	36.157	-0.012199					134	33	5	0	0	0	0.88541	1	2293	2293		11.511	0	1	5338900			11821	1814	8212	8220	13451	13451					0.18194411107424457
GLLLSLLLLP	10	Unmodified	_GLLLSLLLLP_					0	0	0		ENSG00000100263|ENST00000216085|RHBDD3;ENST00000496342.1_1_22:29656732-29660364:-|nuORF	ENSG00000100263|ENST00000216085|RHBDD3	ENSG00000100263|ENST00000216085|RHBDD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3603515625	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.8488	1	2338	2338		17.365	0	1	2871800			11822	1814	8212	8220	13452	13452					0.18194411107424457
GLLLSLLLLP	10	Unmodified	_GLLLSLLLLP_					0	0	0		ENSG00000100263|ENST00000216085|RHBDD3;ENST00000496342.1_1_22:29656732-29660364:-|nuORF	ENSG00000100263|ENST00000216085|RHBDD3	ENSG00000100263|ENST00000216085|RHBDD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3609008789062	2	526.359911	1050.70527	0.23622	0.00012434	2.2547	0.0011868	2.4909	0.0013111	526.3609415708197	35.175	1.5308	35.281	34.617	36.148	0.10604					147	55	3	0	0	0	0.86305	1	1834	1834		31.955	0	1	1065400			11823	1814	8212	8220	13453	13453					0.18194411107424457
GLLLSLTVAM	10	Unmodified	_GLLLSLTVAM_					0	0	0			REV__ENSG00000182768|ENST00000379095|NGRN	REV__ENSG00000182768|ENST00000379095|NGRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.3056335449219	2	509.304278	1016.594	-0.05438	-2.7696E-05	3.0051	0.0015305	2.9508	0.0015028	509.3056675667054	93.221	1.5935	93.291	92.756	94.349	0.06987					113	37	4	0	0	0	0.84112	2	9677	9677;9714		37.159	9.2769	1	2872400	+		11824	22547	8213	8221	13454;13455	13454					0.08637028407827074
GLLLSLTVAM	10	Unmodified	_GLLLSLTVAM_					0	0	0			REV__ENSG00000182768|ENST00000379095|NGRN	REV__ENSG00000182768|ENST00000379095|NGRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.3056945800781	2	509.304278	1016.594	-0.37346	-0.00019021	3.4533	0.0017588	3.0798	0.0015685	509.30591642174505	92.904	1.3737	93.13	92.62	93.993	0.22547					101	32	4	0	0	0	0.86589	1	9420	9420		29.15	1.2673	1	2213400	+		11825	22547	8213	8221	13456	13456					0.08637028407827074
GLLLSPVVA	9	Unmodified	_GLLLSPVVA_					0	0	0			REV__nc|ENSG00000117016|Q9UJD0-2|RIMS3	REV__nc|ENSG00000117016|Q9UJD0-2|RIMS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7791442871094	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.78851	1	3972	3972		28.254	1.4582	1	1803700	+		11826	29800	8214	8222	13457	13457					0.10388447425282266
GLLLSPVVA	9	Unmodified	_GLLLSPVVA_					0	0	0			REV__nc|ENSG00000117016|Q9UJD0-2|RIMS3	REV__nc|ENSG00000117016|Q9UJD0-2|RIMS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78021240234375	2	434.778754	867.542954	0.12026	5.2288E-05	3.2796	0.0014259	3.3998	0.0014782	434.78004408406343	33.259	0.88562	33.227	32.891	33.776	-0.032677					85	40	3	0	0	0	0.7932	1	1601	1601		26.796	6.3143	1	316820	+		11827	29800	8214	8222	13458	13458					0.10388447425282266
GLLLSPVVA	9	Unmodified	_GLLLSPVVA_					0	0	0			REV__nc|ENSG00000117016|Q9UJD0-2|RIMS3	REV__nc|ENSG00000117016|Q9UJD0-2|RIMS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801513671875	2	434.778754	867.542954	-0.30995	-0.00013476	4.1464	0.0018027	3.8364	0.001668	434.78044491218617	37.836	1.2567	38.149	37.864	39.121	0.31312					114	31	4	0	0	0	0.76402	2	3157	3157;3169		35.201	3.0119	1	8178800	+		11828	29800	8214	8222	13459;13460	13459					0.10388447425282266
GLLLSPVVA	9	Unmodified	_GLLLSPVVA_					0	0	0			REV__nc|ENSG00000117016|Q9UJD0-2|RIMS3	REV__nc|ENSG00000117016|Q9UJD0-2|RIMS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	434.778754	867.542954	0.24981	0.00010861	3.5134	0.0015276	3.7632	0.0016362	434.78017285768743	37.739	1.2173	38.259	37.943	39.16	0.51989					114	30	4	0	0	0	0.76402	2	3146	3146;3170		35.201	1.6851	1	8689200	+		11829	29800	8214	8222	13461;13462	13461					0.10388447425282266
GLLLTLTSFNS	11	Unmodified	_GLLLTLTSFNS_					0	0	0			REV__ENSG00000143819|ENST00000272167|EPHX1	REV__ENSG00000143819|ENST00000272167|EPHX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.3765258789062	2	583.326796	1164.63904	-2.0398	-0.0011898	1.9008	0.0011088	-0.13898	-8.1068E-05	583.8303133231393	41.616	0.21894	42.25	42.135	42.354	0.6339					7	5	2	0	0	0	0.17574	1	3685	3685		49.536	0	1	122090	+		11830	19845	8215	8223	13463	13463					0.06330550474694974
GLLLVCRLLH	10	Unmodified	_GLLLVCRLLH_					0	0	0			REV__ENSG00000011028|ENST00000303375|MRC2	REV__ENSG00000011028|ENST00000303375|MRC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.8536376953125	2	568.852261	1135.68997	1.5207	0.00086506	-0.055332	-3.1476E-05	1.4654	0.00083358	568.8521463691729	102.21	3.6255	102.25	101.63	105.26	0.04319					340	87	6	0	0	0	0.85939	1	11451	11451		23.042	4.7181	1	51352000	+		11831	16174	8216	8224	13464	13464					0.12755221038560194
GLLLVGILE	9	Unmodified	_GLLLVGILE_					0	0	0		ENSG00000168955|ENST00000304568|TM4SF20	ENSG00000168955|ENST00000304568|TM4SF20	ENSG00000168955|ENST00000304568|TM4SF20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.80084228515625	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.7932	1	3690	3690		18.324	0.95945	1	269820			11832	6455	8217	8225	13465	13465					0.11905003113815837
GLLLVGILE	9	Unmodified	_GLLLVGILE_					0	0	0		ENSG00000168955|ENST00000304568|TM4SF20	ENSG00000168955|ENST00000304568|TM4SF20	ENSG00000168955|ENST00000304568|TM4SF20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.3009338378906	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.7932	1	3215	3215		19.36	1.0356	1	1091400			11833	6455	8217	8225	13466	13466					0.11905003113815837
GLLLVLAPPPM	11	Unmodified	_GLLLVLAPPPM_					0	0	0			REV__CON__P17690	REV__CON__P17690	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8386840820312	2	560.843571	1119.67259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.13	1	116.15	115.65	116.65	0.026466								0	0	0	0.56276	1	12754	12754		24.203	2.2429	1		+	+	11834	15985	8218	8226	13467	13467					0.11753880712899445
GLLLVPVRDG	10	Unmodified	_GLLLVPVRDG_					0	0	0			REV__ENSG00000130038|ENST00000440314|CRACR2A	REV__ENSG00000130038|ENST00000440314|CRACR2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.822998046875	2	519.818941	1037.62333	-1.4228	-0.00073957	0.0075181	3.908E-06	-1.4152	-0.00073567	519.8190348508368	89.661	0.73373	90.132	89.64	90.374	0.47068					24	18	2	0	0	0	0.37624	1	10640	10640		19.104	0	1	449980	+		11835	18843	8219	8227	13468	13468					0.10602308748320866
GLLLVRMV	8	Oxidation (M)	_GLLLVRM(Oxidation (M))V_		GLLLVRM(1)V		GLLLVRM(47)V	0	0	1			REV__nc|ENSG00000123191|P35670-2|ATP7B	REV__nc|ENSG00000123191|P35670-2|ATP7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	458.787109375	2	458.786056	915.557558	0.80291	0.00036836	2.0876	0.00095776	2.8905	0.0013261	458.7870101504016	92.972	4.4564	93.018	92.411	96.867	0.045448					249	105	5	0	0	0	0.92176	1	9755	9755		46.766	9.738	1	17992000	+		11836	29819	8220	8228	13469	13469		435			0.09640196301779724
GLLLVRMVRP	10	Unmodified	_GLLLVRMVRP_					0	0	0			REV__nc|ENSG00000123191|P35670-2|ATP7B	REV__nc|ENSG00000123191|P35670-2|ATP7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.3660888671875	2	577.365536	1152.71652	3.0575	0.0017653	-1.5308	-0.00088381	1.5268	0.0008815	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.85939	1	11200	11200		23.042	3.0457	1	11111000	+		11837	29819	8221	8229	13470	13470					0.14626909929893372
GLLLVVKA	8	Unmodified	_GLLLVVKA_					0	0	0		ENSG00000119457|ENST00000374228|SLC46A2	ENSG00000119457|ENST00000374228|SLC46A2	ENSG00000119457|ENST00000374228|SLC46A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7845764160156	2	406.783839	811.553125	-0.059143	-2.4059E-05	3.8477	0.0015652	3.7885	0.0015411	406.78528338513706	35.439	0.98428	35.378	35.066	36.05	-0.060333					48	30	2	0	0	0	0.86288	1	1827	1827		26.796	6.3143	1	346370			11838	3070	8222	8230	13471	13471					0.13981055150509292
GLLLVVLEG	9	Unmodified	_GLLLVVLEG_					0	0	0			REV__ENST00000474414.5_1_1:32859966-32860026:-|nuORF	REV__ENST00000474414.5_1_1:32859966-32860026:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7929382324219	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.67235	2	2956	2956;3171		42.474	8.9589	1	608260	+		11839	27300	8223	8231	13472;13473	13472					0.10984716596760791
GLLLWLGRRP	10	Unmodified	_GLLLWLGRRP_					0	0	0			REV__ENST00000409726.5_1_2:238768318-238783297:+|nuORF	REV__ENST00000409726.5_1_2:238768318-238783297:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8673706054688	2	590.8693	1179.72405	-0.23931	-0.0001414	-4.357	-0.0025744	-4.5963	-0.0027158	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.86305	1	10826	10826		31.955	4.0726	1	39787000	+		11840	26354	8224	8232	13474	13474					0.14137385521826218
GLLLWLIQD	9	Unmodified	_GLLLWLIQD_					0	0	0			REV__ENST00000496800.5_1_2:220110721-220112335:+|nuORF	REV__ENST00000496800.5_1_2:220110721-220112335:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.814697265625	2	535.815867	1069.61718	-0.091925	-4.9255E-05	2.9956	0.0016051	2.9037	0.0015558	535.8178493049433	99.302	1.7934	99.351	99.017	100.81	0.049828					71	41	3	0	0	0	0.7932	1	10537	10537		19.104	0.77911	1	385560	+		11841	18140	8225	8233	13475	13475					0.08515790516798916
GLLLYPRSL	9	Unmodified	_GLLLYPRSL_					0	0	0			REV__ENST00000470787.6_1_1:249150751-249153213:-|nuORF	REV__ENST00000470787.6_1_1:249150751-249153213:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3139038085938	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.7724	-0.0014314	-4.3342	-0.0022378	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.7932	1	10261	10261		25.574	1.0549	1	66055000	+		11842	27218	8226	8234	13476	13476					0.10343210236646883
GLLMQGVSY	9	Unmodified	_GLLMQGVSY_					0	0	0			REV__nc|ENSG00000197658|Q8N4F4-1|SLC22A24	REV__nc|ENSG00000197658|Q8N4F4-1|SLC22A24	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.2363586425781	2	484.249503	966.484453	-1.014	-0.00049103	-2.2947	-0.0011112	-3.3087	-0.0016022	484.2479716828367	85.726	0.2165	85.783	85.589	85.805	0.057899					6	4	2	0	0	0	0.20789	1	8693	8693		47.916	14.4	1	67190	+		11843	23258	8227	8235	13477	13477					-0.00012977211497400276
GLLMQRVAA	9	Unmodified	_GLLMQRVAA_					0	0	0			REV__nc|ENSG00000135905|Q96BY6-3|DOCK10	REV__nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27783203125	2	479.778762	957.542971	-1.6631	-0.0007979	2.1763	0.0010441	0.51322	0.00024623	479.7799129867663	87.234	1.9908	87.399	86.998	88.988	0.16473					85	46	3	0	0	0	0.20789	1	8549	8549		30.504	13.139	1	316750	+		11844	19264	8228	8236	13478	13478					0.06250124153632441
GLLNLQRVGLL	11	Unmodified	_GLLNLQRVGLL_					0	0	0		nc|ENSG00000008323|Q3KR16-2|PLEKHG6;ENSG00000008323|ENST00000684764|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3811645507812	2	598.379697	1194.74484	-0.19423	-0.00011622	3.3027	0.0019763	3.1085	0.00186	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.72228	1	3005	3005		27.882	6.1965	1	825320			11845	743	8229	8237	13479	13479					0.15525931110846614
GLLNPMRT	8	Unmodified	_GLLNPMRT_					0	0	0			REV__ENSG00000188763|ENST00000344575|FZD9	REV__ENSG00000188763|ENST00000344575|FZD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.24761962890625	2	451.249837	900.485122	-0.3832	-0.00017292	-1.7344	-0.00078264	-2.1176	-0.00095556	451.2489352445761	65.642	1.3866	65.607	65.049	66.435	-0.034798					101	71	2	0	0	0	0.87922	1	6280	6280		31.955	1.6371	1	1243000	+		11846	23027	8230	8238	13480	13480					0.0308986222820522
GLLPDKLL	8	Unmodified	_GLLPDKLL_					0	0	0		chr19:9474325-9475284|30|14.37|0.55|4.71|-|2|ZNF560,ZNF560|1	chr19:9474325-9475284|30|14.37|0.55|4.71|-|2|ZNF560,ZNF560|1	chr19:9474325-9475284|30|14.37|0.55|4.71|-|2|ZNF560,ZNF560|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.13638	5.9295E-05	3.2501	0.0014131	3.3864	0.0014724	434.7800361226264	34.243	0.88012	34.352	33.821	34.701	0.10829					118	39	4	0	0	0	0.88915	1	1733	1733		35.201	6.9464	1	2838300			11847	301	8231	8239	13481	13481					0.10388447425293634
GLLPGVAVV	9	Unmodified	_GLLPGVAVV_					0	0	0		ENSG00000044012|ENST00000372581|GUCA2B	ENSG00000044012|ENST00000372581|GUCA2B	ENSG00000044012|ENST00000372581|GUCA2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2686767578125	2	412.765646	823.516739	-1.9024	-0.00078523	4.0039	0.0016527	2.1015	0.00086745	412.7675544540149	40.173	1.81	40.179	39.296	41.106	0.0065002					141	57	4	0	0	0	0.78292	1	2467	2467		29.842	0	1	726100			11848	945	8232	8240	13482	13482					0.0979217825380374
GLLPHERVRLN	11	Unmodified	_GLLPHERVRLN_					0	0	0			REV__nc|ENSG00000054523|O60333-2|KIF1B;REV__ENSG00000130294|ENST00000498729|KIF1A;REV__ENSG00000054523|ENST00000676179|KIF1B	REV__ENSG00000130294|ENST00000498729|KIF1A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77972412109375	3	435.257961	1302.75205	0.20407	8.8823E-05	-2.7484	-0.0011963	-2.5443	-0.0011074	435.2577704194667	41.762	0.1234	41.835	41.749	41.872	0.073418					4	2	2	0	0	0	0.17294	1	2757	2757		19.263	9.1181	1	31916	+		11849	18864;16402;29693	8233	8241	13483	13483					0.11278663711277659
GLLPIKTP	8	Unmodified	_GLLPIKTP_					0	0	0		ENST00000345097.8_1_14:89625883-89626123:-|nuORF	ENST00000345097.8_1_14:89625883-89626123:-|nuORF	ENST00000345097.8_1_14:89625883-89626123:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7750549316406	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.884	1	2951	2951		33.516	5.2613	1	10440000			11850	10301	8234	8242	13484	13484					0.10712464770847419
GLLPILKE	8	Unmodified	_GLLPILKE_					0	0	0		ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.78753662109375	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.87276	1	3529	3529		29.842	0	1	539980			11851	920	8235	8243	13485	13485					0.11308733942325944
GLLPKPSL	8	Unmodified	_GLLPKPSL_					0	0	0		chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1;nc|ENSG00000147255|Q8N6C5-2|IGSF1;chrX:131289275-131299651|15|14.27|0.46|4.94|-|ENST00000370904|IGSF1,IGSF1;ENSG00000147255|ENST00000361420|IGSF1;nc|ENSG00000147255|Q8N6C5-4|IGSF1	chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1	chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7667541503906	2	412.765646	823.516739	1.2585	0.00051947	2.4286	0.0010024	3.6871	0.0015219	412.7665201070099	37.01	2.3211	37.292	35.703	38.024	0.28173					152	57	4	0	0	0	0.85277	1	2869	2869		25.45	3.7478	1	3102100			11852	542	8236	8244	13486	13486					0.09792178253815109
GLLPLLAQ	8	Unmodified	_GLLPLLAQ_					0	0	0			REV__nc|ENSG00000178803|P86434|ADORA2A-AS1	REV__nc|ENSG00000178803|P86434|ADORA2A-AS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7665710449219	2	412.765646	823.516739	-0.80567	-0.00033255	3.6306	0.0014986	2.8249	0.001166	412.76743574244557	48.894	3.0852	48.869	47.646	50.731	-0.025112					171	74	4	0	0	0	0.88915	1	4165	4165		35.201	6.9464	1	642490	+		11853	30061	8237	8245	13487	13487					0.0979217825380374
GLLPLLKLKPK	11	Unmodified	_GLLPLLKLKPK_					0	0	0		chr17:28720032-28720707|23|31.09|0.07|8.74|+|0|None,RPL23A|1	chr17:28720032-28720707|23|31.09|0.07|8.74|+|0|None,RPL23A|1	chr17:28720032-28720707|23|31.09|0.07|8.74|+|0|None,RPL23A|1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.28656005859375	3	407.288198	1218.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.503	1	64.503	64.003	65.003	-0.00078583								0	0	0	0.56276	1	6029	6029		13.508	3.404	1				11854	221	8238	8246	13488	13488					0.24209739706816436
GLLPLLKLKPK	11	Unmodified	_GLLPLLKLKPK_					0	0	0		chr17:28720032-28720707|23|31.09|0.07|8.74|+|0|None,RPL23A|1	chr17:28720032-28720707|23|31.09|0.07|8.74|+|0|None,RPL23A|1	chr17:28720032-28720707|23|31.09|0.07|8.74|+|0|None,RPL23A|1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.2865295410156	3	407.288198	1218.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.681	1	64.686	64.186	65.186	0.0046997								0	0	0	0.56276	1	6053	6053		9.2118	2.8909	1				11855	221	8238	8246	13489	13489					0.24209739706816436
GLLPLLQP	8	Unmodified	_GLLPLLQP_					0	0	0		ENSG00000149016|ENST00000476907|TUT1;ENST00000469480.1_1_11:62342568-62343792:-|nuORF	ENSG00000149016|ENST00000476907|TUT1	ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.774658203125	2	425.773471	849.53239	0.17703	7.5374E-05	3.2935	0.0014023	3.4705	0.0014777	425.7747914132181	38.924	1.3455	39.012	38.418	39.764	0.088371					149	38	5	0	0	0	0.86288	1	2404	2404		26.796	1.3459	1	14185000			11856	4991	8239	8247	13490	13490					0.10160464770854105
GLLPLLSGV	9	Unmodified	_GLLPLLSGV_					0	0	0			REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77972412109375	2	434.778754	867.542954	0.76603	0.00033306	3.2628	0.0014186	4.0288	0.0017516	434.77972097925357	57.028	2.3704	57.061	56.581	58.952	0.033184					147	79	3	0	0	0	0.7932	1	5330	5330		26.796	6.3143	1	337650	+		11857	15643	8240	8248	13491	13491					0.10388447425293634
GLLPLLSGV	9	Unmodified	_GLLPLLSGV_					0	0	0			REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7784729003906	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.76996	1	2662	2662		33.516	6.7195	1	2524800	+		11858	15643	8240	8248	13492	13492					0.10388447425293634
GLLPLLSGV	9	Unmodified	_GLLPLLSGV_					0	0	0			REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77996826171875	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.7932	1	1827	1827		26.796	0	1	2251100	+		11859	15643	8240	8248	13493	13493					0.10388447425293634
GLLPLLSGV	9	Unmodified	_GLLPLLSGV_					0	0	0			REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7796325683594	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.69914	2	2636	2628;2636		40.573	8.6178	1	2513700	+		11860	15643	8240	8248	13494;13495	13495					0.10388447425293634
GLLPLLSGV	9	Unmodified	_GLLPLLSGV_					0	0	0			REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7790222167969	2	434.778754	867.542954	-0.10818	-4.7034E-05	3.1846	0.0013846	3.0765	0.0013376	434.7800213108271	39.594	1.7303	39.546	38.941	40.672	-0.04789					162	53	5	0	0	0	0.76996	1	2557	2557		33.516	1.5607	1	5065300	+		11861	15643	8240	8248	13496	13496					0.10388447425293634
GLLPLLSGV	9	Unmodified	_GLLPLLSGV_					0	0	0			REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77874755859375	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.69914	1	2623	2623		40.573	15.122	1	2793300	+		11862	15643	8240	8248	13497	13497					0.10388447425293634
GLLPLLSGV	9	Unmodified	_GLLPLLSGV_					0	0	0			REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799072265625	2	434.778754	867.542954	-0.23402	-0.00010175	2.835	0.0012326	2.601	0.0011308	434.77987896985167	43.157	1.7547	43.107	42.38	44.135	-0.050308					136	44	4	0	0	0	0.7932	1	2874	2874		26.796	1.3459	1	2479900	+		11863	15643	8240	8248	13498	13498					0.10388447425293634
GLLPLLSGV	9	Unmodified	_GLLPLLSGV_					0	0	0			REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77960205078125	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.7932	1	3557	3557		25.45	0	1	6567600	+		11864	15643	8240	8248	13499	13499					0.10388447425293634
GLLPLLSGV	9	Unmodified	_GLLPLLSGV_					0	0	0			REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77935791015625	2	434.778754	867.542954	-0.7455	-0.00032413	3.1434	0.0013667	2.3979	0.0010426	434.7799642778913	44.364	1.5041	44.814	44.322	45.826	0.45025					111	36	4	0	0	0	0.76996	1	4058	4058		33.516	0	1	4473900	+		11865	15643	8240	8248	13500	13500					0.10388447425293634
GLLPLLSGV	9	Unmodified	_GLLPLLSGV_					0	0	0			REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	REV__chr16:84194221-84194442|14|11.0|0.56|4.3|+|1|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7791442871094	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.76996	1	3513	3513		33.516	1.5607	1	15771000	+		11866	15643	8240	8248	13501	13501					0.10388447425293634
GLLPLPRSRL	10	Unmodified	_GLLPLPRSRL_					0	0	0			REV__ENST00000470356.3_1_19:3572943-3574226:+|nuORF	REV__ENST00000470356.3_1_19:3572943-3574226:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.8651123046875	2	561.361308	1120.70806	0.36083	0.00020256	3.644	0.0020456	4.0049	0.0022482	561.3631992343464	46.11	1.1029	46.106	45.577	46.68	-0.0041618					45	26	2	0	0	0	0.86272	1	3715	3715		24.519	2.5593	1	163920	+		11867	27208	8241	8249	13502	13502					0.15253679284933241
GLLPLPSK	8	Unmodified	_GLLPLPSK_					0	0	0		ENSG00000050030|ENST00000055682|NEXMIF	ENSG00000050030|ENST00000055682|NEXMIF	ENSG00000050030|ENST00000055682|NEXMIF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7658386230469	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.356	1	60.325	59.825	60.825	-0.031727								0	0	0	0.29871	1	5692	5692		23.042	1.3402	1				11868	991	8242	8250	13503	13503					0.0979217825380374
GLLPSLED	8	Unmodified	_GLLPSLED_					0	0	0		nc|ENSG00000115419|O94925-3|GLS;ENSG00000115419|ENST00000320717|GLS;nc|ENSG00000115419|O94925-2|GLS;ENST00000479552.1_1_2:191745810-191759998:+|nuORF;ENST00000496170.1_1_2:191745882-191760452:+|nuORF	nc|ENSG00000115419|O94925-3|GLS	nc|ENSG00000115419|O94925-3|GLS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.227783203125	2	422.226551	842.438549	-0.783	-0.0003306	4.1589	0.001756	3.3759	0.0014254	422.2282038382867	57.222	1.4902	57.202	56.824	58.314	-0.01947					144	72	3	0	0	0	0.884	1	4878	4878		33.516	1.5607	1	642490			11869	2842	8243	8251	13504	13504					0.011027008779024072
GLLPVLLGIL	10	Unmodified	_GLLPVLLGIL_					0	0	0			REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	504.3478088378906	2	504.346803	1006.67905	-0.0086847	-4.3801E-06	2.6166	0.0013197	2.6079	0.0013153	504.347924900534	35.919	1.624	35.9	35.375	36.999	-0.018673					117	35	5	0	0	0	0.86786	1	2253	2253		26.796	0	1	1089900	+		11870	28053	8244	8252	13505	13505					0.175981419359573
GLLPVLLGIL	10	Unmodified	_GLLPVLLGIL_					0	0	0			REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	504.346803	1006.67905	-1.6737	-0.00084414	4.3049	0.0021712	2.6312	0.001327	504.3487960069737	35.902	1.4126	35.902	35.366	36.778	0	-0.013035	0.0010645	NaN	26.796	100	34	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	241100	+		11871	28053	8244	8252							0.175981419359573
GLLPVLLGIL	10	Unmodified	_GLLPVLLGIL_					0	0	0			REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	504.346803	1006.67905	-0.0086847	-4.3801E-06	2.6166	0.0013197	2.6079	0.0013153	504.347924900534	35.919	1.624	35.9	35.375	36.999	-0.018673	-0.014882	-0.00063852	NaN	26.796	117	35	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1089900	+		11872	28053	8244	8252							0.175981419359573
GLLPVLLGIL	10	Unmodified	_GLLPVLLGIL_					0	0	0			REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	504.346803	1006.67905	-0.65315	-0.00032941	3.0721	0.0015494	2.4189	0.00122	504.3482080432066	36.098	1.618	36.042	35.385	37.003	-0.055904	0.12742	-0.00017908	NaN	26.796	107	35	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	557330	+		11873	28053	8244	8252							0.175981419359573
GLLPVLLGIL	10	Unmodified	_GLLPVLLGIL_					0	0	0			REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	504.346803	1006.67905	-1.8812	-0.00094877	4.3005	0.0021689	2.4193	0.0012201	504.348815049019	35.998	1.7183	36.007	35.386	37.104	0.0092773	0.092413	0.00106	NaN	26.796	114	37	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	687570	+		11874	28053	8244	8252							0.175981419359573
GLLPVLLGIL	10	Unmodified	_GLLPVLLGIL_					0	0	0			REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	504.346803	1006.67905	-0.55119	-0.00027799	3.1908	0.0016093	2.6396	0.0013313	504.3482582991036	35.952	1.7499	35.983	35.366	37.116	0.031132	0.068393	-5.9294E-05	NaN	26.796	91	48	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	304250	+		11875	28053	8244	8252							0.175981419359573
GLLPVLLGIL	10	Unmodified	_GLLPVLLGIL_					0	0	0			REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	504.346803	1006.67905	0.22109	0.00011151	2.4526	0.001237	2.6737	0.0013485	504.3478980106364	35.666	1.397	35.772	35.314	36.711	0.10604	-0.14276	-0.00080388	NaN	26.796	106	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	305940	+		11876	28053	8244	8252							0.175981419359573
GLLPVLLGIL	10	Unmodified	_GLLPVLLGIL_					0	0	0			REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	REV__ENST00000522865.5_1_8:126963159-126963267:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	504.346803	1006.67905	0.25292	0.00012756	2.5064	0.0012641	2.7593	0.0013916	504.34789483492114	35.858	1.384	35.797	35.283	36.667	-0.060333	-0.11756	-0.00074969	NaN	26.796	86	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	271200	+		11877	28053	8244	8252							0.175981419359573
GLLPVTALV	9	Unmodified	_GLLPVTALV_					0	0	0			REV__ENSG00000167178|ENST00000453268|ISLR2	REV__ENSG00000167178|ENST00000453268|ISLR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7879333496094	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.7932	1	3275	3275		18.324	0.95945	1	54520000	+		11878	21363	8245	8253	13506	13506					0.11308733942314575
GLLQALALI	9	Unmodified	_GLLQALALI_					0	0	0			REV__ENST00000398258.7_1_3:107774387-107777202:-|nuORF	REV__ENST00000398258.7_1_3:107774387-107777202:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30133056640625	2	456.299853	910.585153	0.2873	0.0001311	2.3096	0.0010538	2.5969	0.0011849	456.30080462463604	48.151	1.3839	48.189	47.742	49.126	0.037735					72	38	3	0	0	0	0.7932	1	3681	3681		20.482	1.1219	1	274320	+		11879	23172	8246	8254	13507	13507					0.1262842283365444
GLLQCPEVA	9	Unmodified	_GLLQCPEVA_					0	0	0		nc|ENSG00000258436|Q7Z5J4-2|RAI1;ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1;nc|ENSG00000258436|Q7Z5J4-4|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.22552490234375	2	465.241678	928.468803	-0.30185	-0.00014043	-3.0272	-0.0014084	-3.329	-0.0015488	465.2401373961954	79.002	0.50891	79.552	79.276	79.785	0.54945					19	11	2	0	0	0	0.20789	1	9079	9079		42.396	9.5837	1	173890			11880	2417	8247	8255	13508	13508					0.0017073627144554848
GLLQPPLL	8	Unmodified	_GLLQPPLL_					0	0	0		nc|ENSG00000204256|P25440-2|BRD2	nc|ENSG00000204256|P25440-2|BRD2	nc|ENSG00000204256|P25440-2|BRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.77490234375	2	425.773471	849.53239	0.17703	7.5374E-05	3.2935	0.0014023	3.4705	0.0014777	425.7747914132181	38.924	1.3455	39.012	38.418	39.764	0.088371					149	38	5	0	0	0	0.82464	1	2385	2385		21.702	0	1	14185000			11881	15207	8248	8256	13509	13509					0.10160464770854105
GLLRARALS	9	Unmodified	_GLLRARALS_					0	0	0		ENST00000523677.5_1_1:43748977-43751229:-|nuORF	ENST00000523677.5_1_1:43748977-43751229:-|nuORF	ENST00000523677.5_1_1:43748977-43751229:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.8048095703125	2	478.803626	955.592698	0.24724	0.00011838	4.3933	0.0021035	4.6405	0.0022219	478.8055593968592	41.183	1.271	41.256	40.938	42.209	0.073414					62	33	2	0	0	0	0.77244	1	2717	2717		32.812	2.4947	1	199990			11882	13203	8249	8257	13510	13510					0.11312575153931448
GLLRGLRQAM	10	Unmodified	_GLLRGLRQAM_					0	0	0		ENST00000284240.9_1_11:119289051-119289096:-|nuORF	ENST00000284240.9_1_11:119289051-119289096:-|nuORF	ENST00000284240.9_1_11:119289051-119289096:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.8309326171875	2	557.829317	1113.64408	-0.9931	-0.00055398	3.6691	0.0020467	2.676	0.0014928	557.83140422783	101.17	1.502	101.2	100.79	102.29	0.031036					74	35	3	0	0	0	0.86589	1	10824	10824		29.15	7.1897	1	902020			11883	9645	8250	8258	13511	13511					0.09180575856339601
GLLRGLRQAM	10	Unmodified	_GLLRGLRQAM_					0	0	0		ENST00000284240.9_1_11:119289051-119289096:-|nuORF	ENST00000284240.9_1_11:119289051-119289096:-|nuORF	ENST00000284240.9_1_11:119289051-119289096:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.8299560546875	2	557.829317	1113.64408	1.3464	0.00075106	1.2734	0.00071036	2.6198	0.0014614	557.8300995899048	100.89	1.6699	100.93	100.47	102.14	0.046356					80	39	3	0	0	0	0.85934	1	10880	10880		35.618	8.9254	1	658310			11884	9645	8250	8258	13512	13512					0.09180575856339601
GLLRGLRQAM	10	Unmodified	_GLLRGLRQAM_					0	0	0		ENST00000284240.9_1_11:119289051-119289096:-|nuORF	ENST00000284240.9_1_11:119289051-119289096:-|nuORF	ENST00000284240.9_1_11:119289051-119289096:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.8311767578125	2	557.829317	1113.64408	0.85904	0.0004792	1.7636	0.00098378	2.6226	0.001463	557.8303228390891	100.95	1.6407	101.1	100.55	102.19	0.14352					87	39	3	0	0	0	0.67608	2	10523	10523;10640		45.952	19.259	1	700710			11885	9645	8250	8258	13513;13514	13513					0.09180575856339601
GLLSAPQPLQP	11	Unmodified	_GLLSAPQPLQP_					0	0	0		ENSG00000061455|ENST00000407847|PRDM6	ENSG00000061455|ENST00000407847|PRDM6	ENSG00000061455|ENST00000407847|PRDM6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8198852539062	2	560.821681	1119.62881	-0.54677	-0.00030664	-2.8297	-0.001587	-3.3765	-0.0018936	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.70737	1	9153	9153		30.318	1.1477	1	408930			11886	1074	8251	8259	13515	13515					0.07377987540144204
GLLSHLSKT	9	Unmodified	_GLLSHLSKT_					0	0	0			REV__ENST00000577662.1_1_17:63534239-63554825:-|nuORF	REV__ENST00000577662.1_1_17:63534239-63554825:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2734680175781	2	478.282192	954.549831	2.0401	0.00097572	2.0963	0.0010026	4.1363	0.0019783	478.28301071747734	97.537	0.4959	97.923	97.765	98.261	0.38548					15	11	2	0	0	0	0.20789	1	11723	11723		44.377	11.565	1	67681	+		11887	21508	8252	8260	13516	13516					0.07073760305854648
GLLSKMPPP	9	Unmodified	_GLLSKMPPP_					0	0	0		ENST00000484946.5_1_7:75616732-75616939:-|nuORF	ENST00000484946.5_1_7:75616732-75616939:-|nuORF	ENST00000484946.5_1_7:75616732-75616939:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.2722473144531	2	470.270238	938.525924	1.675	0.00078769	2.3279	0.0010947	4.0028	0.0018824	470.2713101405092	92.346	2.9868	92.282	91.318	94.305	-0.06414					149	70	4	0	0	0	0.78058	1	9755	9755		30.504	2.6214	1	1961400			11888	12546	8253	8261	13517	13517					0.054202035478283506
GLLSLAKPL	9	Unmodified	_GLLSLAKPL_					0	0	0		ENSG00000011451|ENST00000673675|WIZ;nc|ENSG00000011451|O95785-3|WIZ;nc|ENSG00000011451|O95785|WIZ;nc|ENSG00000011451|O95785-4|WIZ	ENSG00000011451|ENST00000673675|WIZ	ENSG00000011451|ENST00000673675|WIZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30126953125	2	456.299853	910.585153	-0.95599	-0.00043622	2.965	0.0013529	2.009	0.00091669	456.30107129124815	45.178	1.6921	45.147	44.106	45.798	-0.031067					86	38	3	0	0	0	0.78536	1	3685	3685		29.15	2.3535	1	476180			11889	793	8254	8262	13518	13518					0.1262842283365444
GLLSLAKPL	9	Unmodified	_GLLSLAKPL_					0	0	0		ENSG00000011451|ENST00000673675|WIZ;nc|ENSG00000011451|O95785-3|WIZ;nc|ENSG00000011451|O95785|WIZ;nc|ENSG00000011451|O95785-4|WIZ	ENSG00000011451|ENST00000673675|WIZ	ENSG00000011451|ENST00000673675|WIZ	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7919616699219	2	456.299853	910.585153	-1.2111	-0.00055264	2.3226	0.0010598	1.1115	0.00050718	456.300744410843	41.37	1.8527	41.329	40.856	42.709	-0.04081					92	47	3	0	0	0	0.20789	1	3299	3299		32.812	8.6097	1	313940			11890	793	8254	8262	13519	13519					0.1262842283365444
GLLSLAKPL	9	Unmodified	_GLLSLAKPL_					0	0	0		ENSG00000011451|ENST00000673675|WIZ;nc|ENSG00000011451|O95785-3|WIZ;nc|ENSG00000011451|O95785|WIZ;nc|ENSG00000011451|O95785-4|WIZ	ENSG00000011451|ENST00000673675|WIZ	ENSG00000011451|ENST00000673675|WIZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3011169433594	2	456.299853	910.585153	0.12298	5.6116E-05	2.7993	0.0012773	2.9223	0.0013334	456.30098509136985	34.994	1.698	34.939	34.615	36.313	-0.055149					136	59	3	0	0	0	0.7932	1	1840	1840		25.45	0	1	657240			11891	793	8254	8262	13520	13520					0.1262842283365444
GLLSLPGVI	9	Unmodified	_GLLSLPGVI_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78033447265625	2	434.778754	867.542954	-0.47801	-0.00020783	4.1901	0.0018218	3.7121	0.0016139	434.78031491435894	33.573	1.1529	33.517	32.851	34.004	-0.056385					70	27	4	0	0	0	0.7932	1	2080	2080		25.45	0	1	421000			11892	7968	8255	8263	13521	13521					0.10388447425293634
GLLSLPGVI	9	Unmodified	_GLLSLPGVI_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7776794433594	2	434.778754	867.542954	0.15311	6.6568E-05	3.0229	0.0013143	3.176	0.0013809	434.7799826029187	37.007	1.7817	37.018	36.075	37.857	0.011173					164	39	5	0	0	0	0.7932	1	2319	2319		24.203	1.1603	1	5259900			11893	7968	8255	8263	13522	13522					0.10388447425293634
GLLSLPGVI	9	Unmodified	_GLLSLPGVI_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77899169921875	2	434.778754	867.542954	0.76603	0.00033306	3.2628	0.0014186	4.0288	0.0017516	434.77972097925357	57.028	2.3704	57.061	56.581	58.952	0.033184					147	79	3	0	0	0	0.77546	1	5273	5273		31.955	6.5047	1	337650			11894	7968	8255	8263	13523	13523					0.10388447425293634
GLLSLPGVI	9	Unmodified	_GLLSLPGVI_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7792663574219	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.76402	1	2620	2620		35.201	1.6851	1	2524800			11895	7968	8255	8263	13524	13524					0.10388447425293634
GLLSLPGVI	9	Unmodified	_GLLSLPGVI_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7799987792969	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.76402	1	3794	3794		35.201	0	1	6567600			11896	7968	8255	8263	13525	13525					0.10388447425293634
GLLSLPGVI	9	Unmodified	_GLLSLPGVI_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7812805175781	2	434.778754	867.542954	-0.97799	-0.00042521	2.2819	0.00099211	1.3039	0.0005669	434.7796012796187	43.693	1.006	44.143	43.436	44.442	0.45024					66	24	3	0	0	0	0.5393	1	3950	3950		50.025	2.1089	1	2290300			11897	7968	8255	8263	13526	13526					0.10388447425293634
GLLSLPPE	8	Unmodified	_GLLSLPPE_					0	0	0		nc|ENSG00000132004|Q5XUX1-2|FBXW9;ENSG00000132004|ENST00000393261|FBXW9	nc|ENSG00000132004|Q5XUX1-2|FBXW9	nc|ENSG00000132004|Q5XUX1-2|FBXW9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2369384765625	2	413.239461	824.46437	0.52355	0.00021635	-1.497	-0.00061862	-0.97345	-0.00040227	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.81548	1	7055	7055		20.482	0	1	1692300			11898	14919	8256	8264	13527	13527					0.045115951201864846
GLLSPVLL	8	Unmodified	_GLLSPVLL_					0	0	0			REV__chr3:102470502-102477012|14|29.36|0.18|7.35|+|0|ZPLD1,ZPLD1|1	REV__chr3:102470502-102477012|14|29.36|0.18|7.35|+|0|ZPLD1,ZPLD1|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2577209472656	2	406.268022	810.521491	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.414	1	66.379	65.879	66.879	-0.035217								0	0	0	0.30004	1	6351	6351		21.702	1.2205	1		+		11899	15794	8257	8265	13528	13528					0.10865062396578651
GLLSPVLNS	9	Unmodified	_GLLSPVLNS_					0	0	0			REV__ENSG00000214517|ENST00000328257|PPME1	REV__ENSG00000214517|ENST00000328257|PPME1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.25946044921875	2	450.263468	898.512382	-1.3168	-0.00059292	-1.4351	-0.00064616	-2.7519	-0.0012391	450.26266605332285	40.083	0.97701	40.672	40	40.977	0.58915					56	23	3	0	0	0	0.67345	1	3437	3437		42.396	10.441	1	1196000	+		11900	23655	8258	8266	13529	13529					0.059066690402460154
GLLSRCFGSLQ	11	Unmodified	_GLLSRCFGSLQ_					0	0	0			REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8089599609375	2	590.81079	1179.60703	-0.8677	-0.00051265	-2.4314	-0.0014365	-3.2991	-0.0019492	590.8092605790742	59.99	1.6283	59.99	59.57	61.199	0					167	67	3	0	0	0	0.51007	1	5279	5279		51.193	1.6567	1	3570000	+		11901	28094	8259	8267	13530	13530					0.02440859519924743
GLLSRCFGSLQ	11	Unmodified	_GLLSRCFGSLQ_					0	0	0			REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8088989257812	2	590.81079	1179.60703	-0.64683	-0.00038215	-2.809	-0.0016596	-3.4559	-0.0020418	590.8091423509106	59.998	1.5026	59.984	59.286	60.789	-0.013729					96	38	3	0	0	0	0.32318	1	5580	5580		69.628	0.8408	1	6218400	+		11902	28094	8259	8267	13531	13531					0.02440859519924743
GLLSRCFGSLQ	11	Unmodified	_GLLSRCFGSLQ_					0	0	0			REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8092651367188	2	590.81079	1179.60703	0.75906	0.00044846	-4.0836	-0.0024126	-3.3245	-0.0019642	590.8083889638864	59.878	1.5877	59.846	59.4	60.988	-0.031727					100	43	3	0	0	0	0.32318	2	5608	5608;5619		69.628	0.8408	1	6527800	+		11903	28094	8259	8267	13532;13533	13532					0.02440859519924743
GLLSRCFGSLQ	11	Unmodified	_GLLSRCFGSLQ_					0	0	0			REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8088989257812	2	590.81079	1179.60703	0.77133	0.00045571	-3.8204	-0.0022571	-3.0491	-0.0018014	590.8085136634772	59.814	1.2746	59.908	59.359	60.634	0.094063					111	41	3	0	0	0	0.13306	3	5127	5127;5153;5182		85.161	18.732	1	4884800	+		11904	28094	8259	8267	13534;13535;13536	13534					0.02440859519924743
GLLSRCFGSLQ	11	Unmodified	_GLLSRCFGSLQ_					0	0	0			REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8092651367188	2	590.81079	1179.60703	-0.32322	-0.00019096	-2.5449	-0.0015035	-2.8681	-0.0016945	590.8092533729065	59.928	1.5542	59.928	59.528	61.083	0.00051117					123	53	3	0	0	0	0.28254	2	5202	5136;5202		75.043	7.5496	1	4758100	+		11905	28094	8259	8267	13537;13538	13538					0.02440859519924743
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7930603027344	2	456.791861	911.569169	0.050318	2.2985E-05	2.6739	0.0012214	2.7242	0.0012444	456.7929831409672	38.348	1.1506	38.32	37.435	38.586	-0.027843					79	26	4	0	0	0	0.76996	2	2562	2494;2562		33.516	6.7195	1	1618700			11906	14353	8260	8268	13539;13540	13540					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7917175292969	2	456.791861	911.569169	0.18235	8.3295E-05	0.58937	0.00026922	0.77171	0.00035251	456.79200220887	40.258	1.2138	40.227	39.65	40.864	-0.030987					94	32	4	0	0	0	0.76402	1	2835	2835		35.201	1.6851	1	1159000			11907	14353	8260	8268	13541	13541					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7913818359375	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.7932	2	3136	3136;3170		26.796	1.3459	1	662040			11908	14353	8260	8268	13542;13543	13542					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79302978515625	2	456.791861	911.569169	-0.85953	-0.00039263	3.5719	0.0016316	2.7123	0.001239	456.7934335420697	36.323	3.5767	36.267	33.824	37.401	-0.055901					213	80	5	0	0	0	0.76996	1	2520	2520		33.516	1.5607	1	4833100			11909	14353	8260	8268	13544	13544					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7926330566406	2	456.791861	911.569169	-1.1724	-0.00053555	3.9802	0.0018181	2.8078	0.0012826	456.7935742947897	38.88	1.6337	38.833	37.942	39.576	-0.047001					120	37	4	0	0	0	0.49378	1	2684	2684		52.299	9.8247	1	2323700			11910	14353	8260	8268	13545	13545					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7917785644531	2	456.791861	911.569169	-1.3117	-0.00059915	2.7647	0.0012629	1.4531	0.00066375	456.79301301178594	40.135	1.4029	40.092	39.45	40.853	-0.043697					111	34	4	0	0	0	0.7932	2	2935	2935;2969		26.796	2.5934	1	1093900			11911	14353	8260	8268	13546;13547	13546					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79150390625	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.76996	1	3255	3255		33.516	3.0119	1	652510			11912	14353	8260	8268	13548	13548					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7933654785156	2	456.791861	911.569169	0.19113	8.7308E-05	2.7762	0.0012681	2.9673	0.0013554	456.7929923736529	37.659	1.0878	37.758	37.313	38.401	0.099277					98	37	4	0	0	0	0.76996	1	2147	2147		33.516	0	1	1361500			11913	14353	8260	8268	13549	13549					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7921142578125	2	456.791861	911.569169	0.032056	1.4643E-05	2.9264	0.0013367	2.9584	0.0013514	456.7930672355845	37.708	1.0507	37.65	37.238	38.288	-0.057915					86	33	4	0	0	0	0.7932	1	2202	2202		26.796	1.3459	1	1430300			11914	14353	8260	8268	13550	13550					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7915954589844	2	456.791861	911.569169	-0.077665	-3.5477E-05	3.236	0.0014782	3.1584	0.0014427	456.79322700683537	35.356	1.7647	35.603	35.091	36.856	0.24769					159	44	4	0	0	0	0.69914	1	2830	2830		40.573	1.7665	1	6766600			11915	14353	8260	8268	13551	13551					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7932434082031	2	456.791861	911.569169	-0.16145	-7.375E-05	3.0967	0.0014145	2.9352	0.0013408	456.79315790298426	37.204	0.82482	37.517	36.88	37.705	0.31312					71	19	4	0	0	0	0.64338	1	2977	2977		44.531	9.3304	1	4730400			11916	14353	8260	8268	13552	13552					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7912292480469	2	456.791861	911.569169	-2.1986	-0.0010043	3.4286	0.0015662	1.23	0.00056186	456.7933193778514	39.928	2.2	40.296	39.048	41.248	0.36797					193	55	5	0	0	0	0.76996	2	3405	3379;3405		33.516	1.5607	1	10973000			11917	14353	8260	8268	13553;13554	13554					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7930908203125	2	456.791861	911.569169	-1.4135	-0.00064567	2.5195	0.0011509	1.106	0.00050522	456.7928761630725	39.835	2.0275	40.401	39.33	41.358	0.56588					154	50	4	0	0	0	0.67235	2	3315	3315;3397		42.474	0	1	4024400			11918	14353	8260	8268	13555;13556	13555					0.10984716596749422
GLLSTILPV	9	Unmodified	_GLLSTILPV_					0	0	0		ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	ENST00000597346.1_1_11:2720620-2721142:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	456.791861	911.569169	-1.8901	-0.00086339	4.7579	0.0021734	2.8678	0.00131	456.7939219447259	38.619	2.2808	38.619	37.218	39.499	0	-0.20308	0.00084851	NaN	52.299	186	55	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2385200			11919	14353	8260	8268							0.10984716596749422
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5926513671875	3	422.592058	1264.75434	-1.7406	-0.00073557	3.1799	0.0013438	1.4393	0.00060825	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.69931	2	3994	3935;3994		31.634	10.538	1	1126900			11920	9245	8261	8269	13557;13558	13558					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5924987792969	3	422.592058	1264.75434	-1.6666	-0.00070429	4.3892	0.0018548	2.7226	0.0011505	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.73621	3	4588	4572;4588;4736		25.126	1.4295	1	771770			11921	9245	8261	8269	13559;13560;13561	13560					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5924987792969	3	422.592058	1264.75434	-0.026175	-1.1061E-05	1.3929	0.00058863	1.3667	0.00057757	422.59256755528145	49.138	2.4235	49.133	48.474	50.898	-0.0056419					208	62	5	0	0	0	0.66009	7	4111	4087;4111;4123;4135;4147;4183;4203		37.508	13.276	1	1959300			11922	9245	8261	8269	13562;13563;13564;13565;13566;13567;13568	13563					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5927429199219	3	422.592058	1264.75434	-0.12961	-5.4774E-05	2.6192	0.0011068	2.4895	0.0010521	422.59301325163335	54.438	1.5298	54.43	53.553	55.082	-0.0077057					142	48	4	0	0	0	0.70584	2	4800	4800;4824		30.569	7.191	1	1173800			11923	9245	8261	8269	13569;13570	13569					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.59271240234375	3	422.592058	1264.75434	-0.14442	-6.1032E-05	1.6829	0.00071116	1.5384	0.00065013	422.5926654554972	55.449	1.1746	55.439	55.01	56.184	-0.010132					83	31	3	0	0	0	0.74022	3	4912	4902;4912;4932		24.232	4.2013	1	310110			11924	9245	8261	8269	13571;13572;13573	13572					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.592529296875	3	422.592058	1264.75434	-0.79538	-0.00033612	2.2528	0.00095203	1.4574	0.00061591	422.592922669687	49.251	2.9518	49.227	47.881	50.833	-0.024033					246	71	5	0	0	0	0.61824	10	4254	4182;4194;4206;4230;4242;4254;4266;4278;4290;4302		42.338	13.761	1	2205000			11925	9245	8261	8269	13574;13575;13576;13577;13578;13579;13580;13581;13582;13583	13579					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.592529296875	3	422.592058	1264.75434	2.1003	0.00088759	-0.63335	-0.00026765	1.467	0.00061994	422.59169327867005	49.208	2.7795	49.208	47.99	50.769	0.00016785					227	65	5	0	0	0	0.61824	5	4204	4107;4167;4179;4204;4216		42.338	12.44	1	2361900			11926	9245	8261	8269	13584;13585;13586;13587;13588	13587					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5926513671875	3	422.592058	1264.75434	1.8674	0.00078915	0.61077	0.00025811	2.4782	0.0010473	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.69931	5	4851	4810;4844;4851;4861;4983		31.634	12.372	1	997830			11927	9245	8261	8269	13589;13590;13591;13592;13593	13591					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.9267578125	3	422.592058	1264.75434	1.507	0.00063683	-0.30878	-0.00013049	1.1982	0.00050634	422.5918242191152	56.954	1.5389	56.988	56.634	58.173	0.033184					128	49	3	0	0	0	0.74405	1	5154	5154		23.378	4.8469	1	319500			11928	9245	8261	8269	13594	13594					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5925598144531	3	422.592058	1264.75434	-1.8214	-0.00076972	3.2668	0.0013805	1.4454	0.00061079	422.5933529014654	49.394	1.9735	49.419	48.567	50.541	0.025574					182	52	4	0	0	0	0.69931	7	3878	3783;3793;3805;3827;3878;3901;3911		31.634	6.1597	1	2033600			11929	9245	8261	8269	13595;13596;13597;13598;13599;13600;13601	13599					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5922546386719	3	422.592058	1264.75434	-1.8148	-0.00076692	3.1159	0.0013168	1.3011	0.00054985	422.59329421382927	53.398	1.1926	53.446	52.625	53.817	0.047802					97	42	3	0	0	0	0.73621	1	4297	4297		25.126	1.7481	1	149080			11930	9245	8261	8269	13602	13602					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.59228515625	3	422.592058	1264.75434	-1.8117	-0.0007656	4.0069	0.0016933	2.1952	0.00092767	422.59357864263933	54.504	2.542	54.559	53.757	56.299	0.055611					235	90	4	0	0	0	0.70584	3	4472	4472;4492;4534		30.569	2.3457	1	1177200			11931	9245	8261	8269	13603;13604;13605	13603					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5923156738281	3	422.592058	1264.75434	0.27263	0.00011521	1.1935	0.00050435	1.4661	0.00061956	422.5924825344156	49.575	1.8502	49.617	48.754	50.604	0.04224					166	47	4	0	0	0	0.70584	3	3911	3832;3866;3911		30.569	7.191	1	2165700			11932	9245	8261	8269	13606;13607;13608	13608					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5928649902344	3	422.592058	1264.75434	0.3184	0.00013455	1.8461	0.00078016	2.1645	0.00091471	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.6493	1	4499	4499		38.754	15.231	1	1249100			11933	9245	8261	8269	13609	13609					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5926208496094	3	422.592058	1264.75434	-0.50953	-0.00021532	1.9207	0.00081167	1.4112	0.00059634	422.59276833389157	49.547	2.3163	49.454	48.483	50.799	-0.093178					199	59	5	0	0	0	0.59499	4	3870	3804;3870;3882;3905		45.022	14.453	1	1796900			11934	9245	8261	8269	13610;13611;13612;13613	13611					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.59283447265625	3	422.592058	1264.75434	-0.68255	-0.00028844	2.8706	0.0012131	2.188	0.00092464	422.59313934575044	54.378	2.61	54.329	53.535	56.145	-0.049271					161	81	4	0	0	0	0.71207	2	4501	4474;4501		29.551	7.865	1	1116400			11935	9245	8261	8269	13614;13615	13615					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5926513671875	3	422.592058	1264.75434	-0.769	-0.00032497	2.0068	0.00084804	1.2378	0.00052307	422.5927811733958	56.589	1.3448	56.562	56.404	57.748	-0.026108					132	66	3	0	0	0	0.74405	1	4791	4791		23.378	0.81632	1	616410			11936	9245	8261	8269	13616	13616					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.5924072265625	3	422.592058	1264.75434	-0.54234	-0.00022919	2.0814	0.00087957	1.539	0.00065038	422.5928449927352	47.261	3.402	47.732	47.137	50.539	0.47139					194	83	4	0	0	0	0.66009	5	4494	4494;4519;4530;4545;4557		37.508	7.9574	1	3501000			11937	9245	8261	8269	13617;13618;13619;13620;13621	13617					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5923156738281	3	422.592058	1264.75434	-0.80518	-0.00034026	2.6379	0.0011148	1.8327	0.0007745	422.59310710706274	46.905	2.5172	47.828	47.069	49.587	0.92315					149	61	4	0	0	0	0.71207	4	4516	4465;4478;4516;4529		29.551	10.245	1	3696000			11938	9245	8261	8269	13622;13623;13624;13625	13624					0.13255699396381715
GLLTGIFLRYL	11	Unmodified	_GLLTGIFLRYL_					0	0	0		ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	ENST00000239444.3_2_5:140557375-140557534:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5926513671875	3	422.592058	1264.75434	0.6873	0.00029045	1.2607	0.00053274	1.948	0.00082319	422.59249256358447	51.682	1.0636	52.35	51.693	52.756	0.66729					66	25	4	0	0	0	0.70584	1	5147	5147		30.569	10.538	1	1158000			11939	9245	8261	8269	13626	13626					0.13255699396381715
GLLTLIVAL	9	Unmodified	_GLLTLIVAL_					0	0	0			REV__ENSG00000204296|ENST00000533191|TSBP1	REV__ENSG00000204296|ENST00000533191|TSBP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7931213378906	2	456.810054	911.605554	-0.047094	-2.1513E-05	1.6156	0.000738	1.5685	0.00071649	456.8099579558009	36.505	0.22086	36.487	36.42	36.641	-0.018673					6	4	2	0	0	0	0.20789	1	2343	2343		31.955	0	1	32344	+		11940	23478	8262	8270	13627	13627					0.1462159349346166
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3595581054688	2	526.359911	1050.70527	-1.5421	-0.00081169	4.0218	0.0021169	2.4797	0.0013052	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.85438	2	2073	2073;2238		16.473	4.2663	1	788470	+		11941	23107	8263	8271	13628;13629	13628					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.360595703125	2	526.359911	1050.70527	-0.016718	-8.7995E-06	2.2479	0.0011832	2.2312	0.0011744	526.3609420824897	35.324	1.4285	35.312	34.729	36.157	-0.012199					134	33	5	0	0	0	0.85939	1	2254	2254		23.042	5.6775	1	5338900	+		11942	23107	8263	8271	13630	13630					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3603515625	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.86452	2	2495	2350;2495		30.504	7.4612	1	781950	+		11943	23107	8263	8271	13631;13632	13632					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3599243164062	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.85939	3	2374	2291;2302;2374		30.504	12.179	1	2871800	+		11944	23107	8263	8271	13633;13634;13635	13635					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.35986328125	2	526.359911	1050.70527	-0.46682	-0.00024572	2.8843	0.0015182	2.4174	0.0012724	526.3612792747932	37.192	2.9497	37.138	36.203	39.152	-0.053555					173	66	5	0	0	0	0.85438	2	2459	2459;2555		30.504	0	1	2681300	+		11945	23107	8263	8271	13636;13637	13636					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3610229492188	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.84112	1	1993	1993		37.159	5.2042	1	5020100	+		11946	23107	8263	8271	13638	13638					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3602294921875	2	526.359911	1050.70527	-0.47346	-0.00024921	2.7476	0.0014462	2.2741	0.001197	526.3612126681783	35.14	1.5704	35.146	34.727	36.297	0.0063934					147	36	5	0	0	0	0.85939	1	2269	2269		23.042	0	1	2682400	+		11947	23107	8263	8271	13639	13639					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3606567382812	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.85438	1	2378	2378		16.473	4.9621	1	2706400	+		11948	23107	8263	8271	13640	13640					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3594360351562	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.85438	3	1931	1849;1860;1931		27.882	5.6775	1	1497200	+		11949	23107	8263	8271	13641;13642;13643	13643					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3611450195312	2	526.359911	1050.70527	-0.2233	-0.00011753	2.7139	0.0014285	2.4906	0.0013109	526.3612023516472	37.188	2.125	37.212	36.022	38.147	0.023624					163	60	4	0	0	0	0.85438	2	2107	2097;2107		27.882	4.8398	1	1504200	+		11950	23107	8263	8271	13644;13645	13645					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.361083984375	2	526.359911	1050.70527	0.22046	0.00011604	2.2181	0.0011675	2.4386	0.0012836	526.3609252843382	33.187	1.6469	33.296	32.993	34.64	0.10991					241	72	5	0	0	0	0.86589	1	1636	1636		29.15	4.9468	1	5657400	+		11951	23107	8263	8271	13646	13646					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3609008789062	2	526.359911	1050.70527	0.23622	0.00012434	2.2547	0.0011868	2.4909	0.0013111	526.3609415708197	35.175	1.5308	35.281	34.617	36.148	0.10604					147	55	3	0	0	0	0.85934	1	1806	1806		35.618	5.1146	1	1065400	+		11952	23107	8263	8271	13647	13647					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3612670898438	2	526.359911	1050.70527	0.28216	0.00014852	2.2187	0.0011678	2.5009	0.0013164	526.3609172298998	37.04	1.8045	36.98	36.127	37.931	-0.060337					149	55	4	0	0	0	0.85438	3	2088	2088;2132;2140		30.504	7.4612	1	1903200	+		11953	23107	8263	8271	13648;13649;13650	13648					0.1819441110740172
GLLTLLLVLP	10	Unmodified	_GLLTLLLVLP_					0	0	0			REV__ENSG00000196260|ENST00000359086|SFTA2	REV__ENSG00000196260|ENST00000359086|SFTA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3609619140625	2	526.359911	1050.70527	1.6664	0.00087713	0.82322	0.00043331	2.4896	0.0013104	526.3602142312507	35.988	1.9361	36.429	35.808	37.744	0.44043					142	47	4	0	0	0	0.86201	1	2801	2801		24.203	0	1	6841400	+		11954	23107	8263	8271	13651	13651					0.1819441110740172
GLLTNELPL	9	Unmodified	_GLLTNELPL_					0	0	0		ENSG00000181873|ENST00000366711|IBA57	ENSG00000181873|ENST00000366711|IBA57	ENSG00000181873|ENST00000366711|IBA57	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2869567871094	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.836	1	78.963	78.463	79.463	0.12695								0	0	0	0.28223	1	7451	7451		37.812	0	1				11955	7411	8264	8272	13652	13652					0.06871224728774905
GLLTPLPD	8	Unmodified	_GLLTPLPD_					0	0	0		ENST00000471934.1_1_1:44435799-44436661:+|nuORF;ENST00000527567.1_1_1:44435799-44436540:+|nuORF;ENST00000490861.5_1_1:44435799-44436893:+|nuORF;nc|ENSG00000132768|Q9BQC3-2|DPH2;ENSG00000132768|ENST00000255108|DPH2	ENST00000471934.1_1_1:44435799-44436661:+|nuORF	ENST00000471934.1_1_1:44435799-44436661:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2370300292969	2	413.239461	824.46437	-1.8341	-0.00075793	0.52075	0.00021519	-1.3134	-0.00054274	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.90465	1	7027	7027		40.573	7.057	1	2012200			11956	3826	8265	8273	13653	13653					0.045115951201864846
GLLTTTVATA	10	Unmodified	_GLLTTTVATA_					0	0	0			REV__ENST00000417037.6_2_3:38183152-38183278:+|nuORF	REV__ENST00000417037.6_2_3:38183152-38183278:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.3048400878906	2	474.274032	946.533512	-1.6357	-0.00077576	1.1807	0.00055995	-0.45502	-0.0002158	474.27454678291906	46.157	0.59869	47.073	46.709	47.307	0.91609					25	14	2	0	0	0	0.37624	1	4339	4339		21.96	4.5949	1	389460	+		11957	26440	8266	8274	13654	13654					0.05810634349074917
GLLTTTVATA	10	Unmodified	_GLLTTTVATA_					0	0	0			REV__ENST00000417037.6_2_3:38183152-38183278:+|nuORF	REV__ENST00000417037.6_2_3:38183152-38183278:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	474.274032	946.533512	-0.52651	-0.00024971	0.37811	0.00017933	-0.14841	-7.0385E-05	474.2740848759104	46.332	0.48469	46.803	46.536	47.021	0.47139	-0.13466	-0.0004666	NaN	21.96	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	337310	+		11958	26440	8266	8274							0.05810634349074917
GLLTVAAPLD	10	Unmodified	_GLLTVAAPLD_					0	0	0		ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.28485107421875	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.986	1	72.116	71.616	72.616	0.1301								0	0	0	0.45132	1	6585	6585		34.173	2.2177	1				11959	1556	8267	8275	13655	13655					0.06871224728752168
GLLTVFSLRFL	11	Unmodified	_GLLTVFSLRFL_					0	0	0		ENST00000480367.1_1_7:154677243-154681360:+|nuORF	ENST00000480367.1_1_7:154677243-154681360:+|nuORF	ENST00000480367.1_1_7:154677243-154681360:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5924072265625	3	422.592058	1264.75434	-0.026175	-1.1061E-05	1.3929	0.00058863	1.3667	0.00057757	422.59256755528145	49.138	2.4235	49.133	48.474	50.898	-0.0056419					208	62	5	0	0	0	0.76892	1	4063	4063		17.833	3.7471	1	1959300			11960	12431	8268	8276	13656	13656					0.13255699396381715
GLLTVFSLRFL	11	Unmodified	_GLLTVFSLRFL_					0	0	0		ENST00000480367.1_1_7:154677243-154681360:+|nuORF	ENST00000480367.1_1_7:154677243-154681360:+|nuORF	ENST00000480367.1_1_7:154677243-154681360:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5924987792969	3	422.592058	1264.75434	-1.8214	-0.00076972	3.2668	0.0013805	1.4454	0.00061079	422.5933529014654	49.394	1.9735	49.419	48.567	50.541	0.025574					182	52	4	0	0	0	0.71803	1	3837	3837		28.577	0	1	2033600			11961	12431	8268	8276	13657	13657					0.13255699396381715
GLLTVFSLRFL	11	Unmodified	_GLLTVFSLRFL_					0	0	0		ENST00000480367.1_1_7:154677243-154681360:+|nuORF	ENST00000480367.1_1_7:154677243-154681360:+|nuORF	ENST00000480367.1_1_7:154677243-154681360:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.59246826171875	3	422.592058	1264.75434	-0.50953	-0.00021532	1.9207	0.00081167	1.4112	0.00059634	422.59276833389157	49.547	2.3163	49.454	48.483	50.799	-0.093178					199	59	5	0	0	0	0.71207	4	3847	3760;3782;3847;3893		29.551	1.5756	1	1796900			11962	12431	8268	8276	13658;13659;13660;13661	13660					0.13255699396381715
GLLTVFSLRFL	11	Unmodified	_GLLTVFSLRFL_					0	0	0		ENST00000480367.1_1_7:154677243-154681360:+|nuORF	ENST00000480367.1_1_7:154677243-154681360:+|nuORF	ENST00000480367.1_1_7:154677243-154681360:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.5924377441406	3	422.592058	1264.75434	-0.54234	-0.00022919	2.0814	0.00087957	1.539	0.00065038	422.5928449927352	47.261	3.402	47.732	47.137	50.539	0.47139					194	83	4	0	0	0	0.74022	1	4506	4506		24.232	0.71747	1	3501000			11963	12431	8268	8276	13662	13662					0.13255699396381715
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7671813964844	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.72098	6	2267	2246;2258;2267;2277;2288;2300		39.021	9.18	1	1649400			11964	9640	8269	8277	13663;13664;13665;13666;13667;13668	13665					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7669982910156	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.72098	1	2606	2606		39.021	0	1	795210			11965	9640	8269	8277	13669	13669					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7673034667969	2	412.765646	823.516739	-0.024773	-1.0226E-05	2.7576	0.0011383	2.7329	0.001128	412.7671753724154	37.892	4.8812	37.868	35.596	40.477	-0.023979					267	113	4	0	0	0	0.72098	5	2532	2520;2532;2544;2569;2726		39.021	9.18	1	1546000			11966	9640	8269	8277	13670;13671;13672;13673;13674	13671					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7672119140625	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.812	1	41.781	41.281	42.281	-0.030991								0	0	0	0.2792	1	3079	3079		39.021	0	1				11967	9640	8269	8277	13675	13675					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7672424316406	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.55559	2	2596	2596;2621		49.211	8.6382	1	2097300			11968	9640	8269	8277	13676;13677	13676					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7657165527344	2	412.765646	823.516739	-1.3459	-0.00055553	3.4065	0.0014061	2.0606	0.00085056	412.76701040612045	40.372	1.7448	40.328	39.579	41.324	-0.043694					94	45	3	0	0	0	0.72098	2	2999	2976;2999		39.021	0	1	625910			11969	9640	8269	8277	13678;13679	13679					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.27227783203125	2	412.765646	823.516739	-0.74501	-0.00030751	1.9412	0.00080124	1.1962	0.00049373	412.76752343174905	51.726	2.8281	51.703	50.733	53.561	-0.02343					117	74	2	0	0	0	0.78292	1	4509	4509		29.842	3.0454	1	194350			11970	9640	8269	8277	13680	13680					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76727294921875	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.72098	2	2538	2538;2550		39.021	9.18	1	2034000			11971	9640	8269	8277	13681;13682	13681					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2672424316406	2	412.765646	823.516739	1.2445	0.00051368	-1.8023	-0.00074392	-0.55779	-0.00023024	412.76609709283645	41.289	1.0546	41.296	40.74	41.795	0.0065727					35	27	2	0	0	0	0.78292	1	2965	2965		29.842	0	1	169780			11972	9640	8269	8277	13683	13683					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76702880859375	2	412.765646	823.516739	1.4126	0.00058306	1.8694	0.00077163	3.282	0.0013547	412.7662658707051	42.038	1.4358	42.042	41.461	42.897	0.003418					59	34	2	0	0	0	0.78292	1	3199	3199		29.842	8.1392	1	683700			11973	9640	8269	8277	13684	13684					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.267822265625	2	412.765646	823.516739	-1.9024	-0.00078523	4.0039	0.0016527	2.1015	0.00086745	412.7675544540149	40.173	1.81	40.179	39.296	41.106	0.0065002					141	57	4	0	0	0	0.78292	1	2502	2502		29.842	0	1	726100			11974	9640	8269	8277	13685	13685					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7669677734375	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.72098	3	2770	2770;2793;2816		39.021	7.0666	1	669780			11975	9640	8269	8277	13686;13687;13688	13686					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26751708984375	2	412.765646	823.516739	0.2674	0.00011037	3.4179	0.0014108	3.6853	0.0015212	412.76694459903433	48.848	3.1893	48.886	47.742	50.932	0.037731					149	88	4	0	0	0	0.7932	1	3701	3701		21.702	3.3779	1	734040			11976	9640	8269	8277	13689	13689					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76715087890625	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.726	1	37.826	37.326	38.326	0.099277								0	0	0	0.2792	1	2184	2184		39.021	9.18	1				11977	9640	8269	8277	13690	13690					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7669982910156	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.79	1	37.89	37.39	38.39	0.099277								0	0	0	0.30219	1	2193	2193		29.842	4.3914	1				11978	9640	8269	8277	13691	13691					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7671813964844	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.426	1	43.483	42.983	43.983	0.056744								0	0	0	0.2792	1	2994	2994		39.021	0	1				11979	9640	8269	8277	13692	13692					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7669982910156	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.55559	1	2181	2181		49.211	10.189	1	1619400			11980	9640	8269	8277	13693	13693					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7674865722656	2	412.765646	823.516739	-0.21056	-8.6912E-05	2.569	0.0010604	2.3584	0.00097348	412.76685422643334	40.116	1.6377	40.068	39.082	40.719	-0.04789					115	51	3	0	0	0	0.72098	2	2535	2455;2535		39.021	7.0666	1	699640			11981	9640	8269	8277	13694;13695	13695					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.26751708984375	2	412.765646	823.516739	-0.62558	-0.00025822	2.0435	0.0008435	1.4179	0.00058528	412.7673203899957	51.451	2.0511	51.366	50.837	52.888	-0.084538					105	61	2	0	0	0	0.78292	1	4134	4134		29.842	0	1	311840			11982	9640	8269	8277	13696	13696					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.76727294921875	2	412.765646	823.516739	1.2585	0.00051947	2.4286	0.0010024	3.6871	0.0015219	412.7665201070099	37.01	2.3211	37.292	35.703	38.024	0.28173					152	57	4	0	0	0	0.55559	3	2941	2929;2941;2954		49.211	10.189	1	3102100			11983	9640	8269	8277	13697;13698;13699	13698					0.09792178253792372
GLLVALPAA	9	Unmodified	_GLLVALPAA_					0	0	0		ENST00000409781.1_1_2:87016528-87017758:-|nuORF;ENST00000352580.7_2_2:87013010-87017728:-|nuORF;ENST00000283635.7_2_2:87016528-87018429:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	ENST00000409781.1_1_2:87016528-87017758:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7669372558594	2	412.765646	823.516739	1.2488	0.00051545	2.3587	0.00097359	3.6075	0.001489	412.7664969922496	36.891	1.9427	37.376	36.231	38.174	0.48581					136	47	4	0	0	0	0.72098	2	2913	2913;2949		39.021	9.18	1	3061300			11984	9640	8269	8277	13700;13701	13700					0.09792178253792372
GLLVCNKAN	9	Unmodified	_GLLVCNKAN_					0	0	0			REV__ENSG00000187969|ENST00000339534|ZCCHC13	REV__ENSG00000187969|ENST00000339534|ZCCHC13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.25335693359375	2	466.25512	930.495686	-1.0712	-0.00049944	-1.7254	-0.00080447	-2.7966	-0.0013039	466.2541904327881	60.586	1.2512	60.686	59.935	61.186	0.10082					87	49	2	0	0	0	0.7932	1	5229	5229		23.042	0	1	202870	+		11985	22967	8270	8278	13702	13702					0.027658448826286985
GLLVGPLLS	9	Unmodified	_GLLVGPLLS_					0	0	0			REV__ENSG00000179002|ENST00000375371|TAS1R2	REV__ENSG00000179002|ENST00000375371|TAS1R2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7794494628906	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.67235	1	3604	3604		42.474	0	1	1959200	+		11986	22307	8271	8279	13703	13703					0.10388447425293634
GLLVGPLLS	9	Unmodified	_GLLVGPLLS_					0	0	0			REV__ENSG00000179002|ENST00000375371|TAS1R2	REV__ENSG00000179002|ENST00000375371|TAS1R2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.7932	1	3579	3579		25.45	1.2474	1	1986600	+		11987	22307	8271	8279	13704	13704					0.10388447425293634
GLLVGQKP	8	Unmodified	_GLLVGQKP_					0	0	0		nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.26043701171875	2	406.255446	810.496338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.28	1	58.267	57.767	58.767	-0.013641								0	0	0	0.29353	1	5300	5300		28.254	2.8041	1				11988	14803	8272	8280	13705	13705					0.08351007593989834
GLLVGQKP	8	Unmodified	_GLLVGQKP_					0	0	0		nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2580261230469	2	406.255446	810.496338	1.9631	0.00079754	2.4509	0.00099569	4.414	0.0017932	406.25639366891517	55.168	1.6481	55.195	54.525	56.173	0.027142					71	44	2	0	0	0	0.81548	1	5055	5055		20.482	3.1169	1	211340			11989	14803	8272	8280	13706	13706					0.08351007593989834
GLLVGQKP	8	Unmodified	_GLLVGQKP_					0	0	0		nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2566833496094	2	406.255446	810.496338	0.32239	0.00013097	4.1267	0.0016765	4.4491	0.0018075	406.25699058298386	55.031	2.344	55.122	53.969	56.313	0.091167					99	72	2	0	0	0	0.86791	1	4613	4613		28.254	7.7724	1	315510			11990	14803	8272	8280	13707	13707					0.08351007593989834
GLLVGQKP	8	Unmodified	_GLLVGQKP_					0	0	0		nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2574768066406	2	406.255446	810.496338	0.40708	0.00016538	3.217	0.0013069	3.624	0.0014723	406.25658192543807	64.684	1.5075	64.808	63.9	65.408	0.12397					94	59	2	0	0	0	0.87276	1	5648	5648		29.842	4.3914	1	141770			11991	14803	8272	8280	13708	13708					0.08351007593989834
GLLVGQKP	8	Unmodified	_GLLVGQKP_					0	0	0		nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2596435546875	2	406.255446	810.496338	0.42655	0.00017329	3.2952	0.0013387	3.7217	0.001512	406.2566706116534	66.482	0.82449	66.608	66.363	67.188	0.12649					65	38	2	0	0	0	0.80706	1	5928	5928		19.36	4.6959	1	124840			11992	14803	8272	8280	13709	13709					0.08351007593989834
GLLVGQKP	8	Unmodified	_GLLVGQKP_					0	0	0		nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2581787109375	2	406.255446	810.496338	0.4356	0.00017696	3.2885	0.001336	3.7241	0.001513	406.2566834983236	67.315	1.2036	67.443	67.189	68.392	0.12748					81	45	2	0	0	0	0.86791	1	5992	5992		28.254	1.4582	1	112860			11993	14803	8272	8280	13710	13710					0.08351007593989834
GLLVGQKP	8	Unmodified	_GLLVGQKP_					0	0	0		nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25701904296875	2	406.255446	810.496338	-0.45135	-0.00018336	4.2955	0.0017451	3.8442	0.0015617	406.2571064964768	46.486	2.3438	46.407	45.139	47.483	-0.079006					113	66	3	0	0	0	0.86791	1	3407	3407		28.254	1.4582	1	691740			11994	14803	8272	8280	13711	13711					0.08351007593989834
GLLVGQKP	8	Unmodified	_GLLVGQKP_					0	0	0		nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25897216796875	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.81548	1	3906	3906		20.482	0	1	334920			11995	14803	8272	8280	13712	13712					0.08351007593989834
GLLVLIDGI	9	Unmodified	_GLLVLIDGI_					0	0	0			REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79290771484375	2	456.791861	911.569169	0.050318	2.2985E-05	2.6739	0.0012214	2.7242	0.0012444	456.7929831409672	38.348	1.1506	38.32	37.435	38.586	-0.027843					79	26	4	0	0	0	0.76402	1	2478	2478		35.201	1.6851	1	1618700	+		11996	15486	8273	8281	13713	13713					0.10984716596760791
GLLVLIDGI	9	Unmodified	_GLLVLIDGI_					0	0	0			REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7930908203125	2	456.791861	911.569169	-1.4265	-0.00065161	4.1949	0.0019162	2.7684	0.0012646	456.7936601394385	37.79	2.3589	37.801	37.33	39.689	0.011173					114	54	4	0	0	0	0.76402	1	2514	2514		35.201	1.6851	1	2031500	+		11997	15486	8273	8281	13714	13714					0.10984716596760791
GLLVLIDGI	9	Unmodified	_GLLVLIDGI_					0	0	0			REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7930603027344	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.76996	1	2046	2046		33.516	1.5607	1	3452400	+		11998	15486	8273	8281	13715	13715					0.10984716596760791
GLLVLIDGI	9	Unmodified	_GLLVLIDGI_					0	0	0			REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79193115234375	2	456.791861	911.569169	-2.1986	-0.0010043	3.4286	0.0015662	1.23	0.00056186	456.7933193778514	39.928	2.2	40.296	39.048	41.248	0.36797					193	55	5	0	0	0	0.7932	1	3272	3272		13.775	0	1	10973000	+		11999	15486	8273	8281	13716	13716					0.10984716596760791
GLLVLIDGI	9	Unmodified	_GLLVLIDGI_					0	0	0			REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79083251953125	2	456.791861	911.569169	1.3225	0.00060413	1.789	0.00081719	3.1115	0.0014213	456.79255750887523	35.219	1.7546	35.6	35.098	36.853	0.3812					157	44	4	0	0	0	0.7932	1	2836	2836		25.45	1.2474	1	7423700	+		12000	15486	8273	8281	13717	13717					0.10984716596760791
GLLVLLVDS	9	Unmodified	_GLLVLLVDS_					0	0	0			REV__ENST00000560192.5_1_15:91447248-91454469:+|nuORF	REV__ENST00000560192.5_1_15:91447248-91454469:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7913818359375	2	464.789318	927.564084	0.1718	7.9849E-05	2.8678	0.0013329	3.0395	0.0014127	464.7905115336865	34.402	1.3055	34.346	33.931	35.236	-0.055149					140	57	3	0	0	0	0.7932	1	1711	1711		19.36	1.0356	1	289420	+		12001	28753	8274	8282	13718	13718					0.0974041273415196
GLLVLPLST	9	Unmodified	_GLLVLPLST_					0	0	0		ENSG00000135569|ENST00000258034|TAAR5	ENSG00000135569|ENST00000258034|TAAR5	ENSG00000135569|ENST00000258034|TAAR5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79156494140625	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.7932	1	3159	3159		25.45	1.2474	1	662040			12002	4035	8275	8283	13719	13719					0.10984716596760791
GLLVLPLST	9	Unmodified	_GLLVLPLST_					0	0	0		ENSG00000135569|ENST00000258034|TAAR5	ENSG00000135569|ENST00000258034|TAAR5	ENSG00000135569|ENST00000258034|TAAR5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7923583984375	2	456.791861	911.569169	-1.1724	-0.00053555	3.9802	0.0018181	2.8078	0.0012826	456.7935742947897	38.88	1.6337	38.833	37.942	39.576	-0.047001					120	37	4	0	0	0	0.7932	1	2806	2806		18.324	0	1	2323700			12003	4035	8275	8283	13720	13720					0.10984716596760791
GLLVMALY	8	Unmodified	_GLLVMALY_					0	0	0			REV__nc|ENSG00000141458|O15118-2|NPC1	REV__nc|ENSG00000141458|O15118-2|NPC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2544250488281	2	440.254057	878.493561	-0.82975	-0.0003653	3.597	0.0015836	2.7672	0.0012183	440.2556367977485	60.313	1.0519	60.313	60.031	61.083	0.00051117					60	36	3	0	0	0	0.84567	1	5243	5243		24.504	0	1	290170	+		12004	19688	8276	8284	13721	13721					0.04945416144835235
GLLVMALY	8	Unmodified	_GLLVMALY_					0	0	0			REV__nc|ENSG00000141458|O15118-2|NPC1	REV__nc|ENSG00000141458|O15118-2|NPC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2556457519531	2	440.254057	878.493561	-1.055	-0.00046445	4.0449	0.0017808	2.99	0.0013163	440.255692333896	66.85	0.64691	66.903	66.553	67.2	0.052376					60	27	3	0	0	0	0.91333	1	5940	5940		43.626	0	1	260280	+		12005	19688	8276	8284	13722	13722					0.04945416144835235
GLLVRIAM	8	Unmodified	_GLLVRIAM_					0	0	0			REV__nc|ENSG00000003137|Q9NR63-2|CYP26B1	REV__nc|ENSG00000003137|Q9NR63-2|CYP26B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.77471923828125	2	436.772948	871.531344	0.9016	0.00039379	3.4833	0.0015214	4.3849	0.0019152	436.7743718767523	90.506	2.2468	90.957	90.49	92.737	0.45058					142	53	4	0	0	0	0.92176	1	10803	10803		46.766	14.812	1	8766100	+		12006	16049	8277	8285	13723	13723					0.0904392713028983
GLLVSSRH	8	Unmodified	_GLLVSSRH_					0	0	0		ENST00000366591.4_1_1:236305922-236343463:+|nuORF	ENST00000366591.4_1_1:236305922-236343463:+|nuORF	ENST00000366591.4_1_1:236305922-236343463:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801208496094	2	434.753601	867.49265	0.095422	4.1485E-05	2.9408	0.0012785	3.0362	0.00132	434.75450053432604	37.224	0.13492	37.235	37.15	37.285	0.011173					4	2	2	0	0	0	0.4196	1	2472	2472		31.955	0	1	7563.8			12007	10511	8278	8286	13724	13724					0.05360337820150107
GLLVVILNA	9	Unmodified	_GLLVVILNA_					0	0	0			REV__ENST00000491599.1_2_1:155902488-155904164:-|nuORF	REV__ENST00000491599.1_2_1:155902488-155904164:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3014221191406	2	456.299853	910.585153	0.17352	7.9178E-05	1.8885	0.00086173	2.062	0.00094091	456.30054777495894	45.254	1.9566	45.236	44.141	46.098	-0.018585					90	45	3	0	0	0	0.7932	1	3674	3674		26.796	1.3459	1	417410	+		12008	27660	8279	8287	13725	13725					0.1262842283365444
GLLWLHKQ	8	Unmodified	_GLLWLHKQ_					0	0	0			REV__ENST00000476524.1_1_21:34907041-34907560:-|nuORF	REV__ENST00000476524.1_1_21:34907041-34907560:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.79498291015625	2	497.795269	993.575986	-0.62564	-0.00031144	1.9566	0.00097397	1.3309	0.00066253	497.7959662701911	48.367	0.7753	48.389	47.898	48.674	0.02227					49	20	3	0	0	0	0.82464	1	3688	3688		21.702	2.3424	1	392340	+		12009	27334	8280	8288	13726	13726					0.07894074267983342
GLLWLHKQ	8	Unmodified	_GLLWLHKQ_					0	0	0			REV__ENST00000476524.1_1_21:34907041-34907560:-|nuORF	REV__ENST00000476524.1_1_21:34907041-34907560:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.7960510253906	2	497.795269	993.575986	0.33469	0.00016661	1.0393	0.00051735	1.374	0.00068396	497.79551634358694	49.085	0.97178	49.123	48.706	49.678	0.037735					52	22	3	0	0	0	0.87807	1	3788	3788		31.579	6.1287	1	383630	+		12010	27334	8280	8288	13727	13727					0.07894074267983342
GLLWQLRP	8	Unmodified	_GLLWQLRP_					0	0	0		ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7957763671875	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.86288	1	4095	4095		26.796	1.3459	1	1240000			12011	3273	8281	8289	13728	13728					0.08446074267988024
GLLWQLRP	8	Unmodified	_GLLWQLRP_					0	0	0		ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79547119140625	2	491.795269	981.575986	-0.71044	-0.00034939	1.6504	0.00081164	0.93993	0.00046225	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.80706	1	4040	4040		19.36	0	1	571510			12012	3273	8281	8289	13729	13729					0.08446074267988024
GLLWQLRP	8	Unmodified	_GLLWQLRP_					0	0	0		ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958068847656	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.85277	1	4693	4693		25.45	1.2474	1	1759500			12013	3273	8281	8289	13730	13730					0.08446074267988024
GLLWQLRP	8	Unmodified	_GLLWQLRP_					0	0	0		ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7959899902344	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.80706	1	4415	4415		19.36	0	1	748320			12014	3273	8281	8289	13731	13731					0.08446074267988024
GLLWQLRP	8	Unmodified	_GLLWQLRP_					0	0	0		ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7957763671875	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.91005	1	3763	3763		42.474	5.3154	1	1502200			12015	3273	8281	8289	13732	13732					0.08446074267988024
GLLWQLRP	8	Unmodified	_GLLWQLRP_					0	0	0		ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958984375	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.88915	1	4110	4110		35.201	4.6971	1	412030			12016	3273	8281	8289	13733	13733					0.08446074267988024
GLLWQLRP	8	Unmodified	_GLLWQLRP_					0	0	0		ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79571533203125	2	491.795269	981.575986	-1.1725	-0.00057664	2.0381	0.0010023	0.86553	0.00042567	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.91005	1	4281	4281		42.474	8.9589	1	3001500			12017	3273	8281	8289	13734	13734					0.08446074267988024
GLMGFIVYK	9	Unmodified	_GLMGFIVYK_					0	0	0		ENST00000557260.1_1_14:104380761-104387854:-|nuORF;ENSG00000156411|ENST00000286953|ATP5MJ;ENST00000554528.1_1_14:104381385-104387854:-|nuORF;nc|ENSG00000156411|P56378-2|ATP5MJ	ENST00000557260.1_1_14:104380761-104387854:-|nuORF	ENST00000557260.1_1_14:104380761-104387854:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.28662109375	2	514.285889	1026.55722	-0.68466	-0.00035211	0.66224	0.00034058	-0.022422	-1.1531E-05	514.2861534374437	72.923	0.6178	73.308	72.917	73.535	0.38581					25	14	2	0	0	0	0.19953	2	8167	8156;8167		73.975	22.639	1	805300			12018	13767	8282	8290	13735;13736	13736					0.04500776581903665
GLMGFIVYK	9	Unmodified	_GLMGFIVYK_					0	0	0		ENST00000557260.1_1_14:104380761-104387854:-|nuORF;ENSG00000156411|ENST00000286953|ATP5MJ;ENST00000554528.1_1_14:104381385-104387854:-|nuORF;nc|ENSG00000156411|P56378-2|ATP5MJ	ENST00000557260.1_1_14:104380761-104387854:-|nuORF	ENST00000557260.1_1_14:104380761-104387854:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.2860107421875	2	514.285889	1026.55722	0.25685	0.00013209	1.0074	0.0005181	1.2643	0.00065019	514.2856677718055	72.796	0.77337	73.35	72.943	73.716	0.55386					49	18	4	0	0	0	0.18566	2	8183	8170;8183		76.847	31.5	1	750750			12019	13767	8282	8290	13737;13738	13738					0.04500776581903665
GLNALVKP	8	Unmodified	_GLNALVKP_					0	0	0			REV__ENSG00000255804|ENST00000540461|OR6J1	REV__ENSG00000255804|ENST00000540461|OR6J1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2574462890625	2	406.255446	810.496338	0.32239	0.00013097	4.1267	0.0016765	4.4491	0.0018075	406.25699058298386	55.031	2.344	55.122	53.969	56.313	0.091167					99	72	2	0	0	0	0.86288	1	4448	4448		26.796	2.5934	1	315510	+		12020	23902	8283	8291	13739	13739					0.08351007593989834
GLNENDYK	8	Unmodified	_GLNENDYK_					0	0	0		nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;ENSG00000196586|ENST00000369977|MYO6;nc|ENSG00000196586|Q9UM54|MYO6	nc|ENSG00000196586|Q9UM54-5|MYO6	nc|ENSG00000196586|Q9UM54-5|MYO6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2464904785156	2	476.722164	951.429775	0.1145	5.4587E-05	-3.3416	-0.001593	-3.2271	-0.0015384	476.72047401630846	64.286	0.96961	64.672	64.265	65.234	0.38681					36	22	2	0	0	0	0.4196	1	7009	7009		82.305	22.011	1	107100			12021	8077	8284	8292	13740	13740					-0.047882727585715656
GLNIRLYAG	9	Unmodified	_GLNIRLYAG_					0	0	0		ENSG00000103740|ENST00000258873|ACSBG1	ENSG00000103740|ENST00000258873|ACSBG1	ENSG00000103740|ENST00000258873|ACSBG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.7423400878906	2	488.782359	975.550165	-0.18016	-8.8057E-05	-0.057331	-2.8022E-05	-0.23749	-0.00011608	488.7844394897657	78.985	0.25452	79.534	79.318	79.573	0.54945					6	5	2	0	0	0	0.20789	1	9041	9041		47.916	39.093	1	26371			12022	2099	8285	8293	13741	13741					0.06141180025701942
GLNKGQRP	8	Unmodified	_GLNKGQRP_					0	0	0			REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25213623046875	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.86288	1	8481	8481		26.796	0.10319	1	3292300	+		12023	28452	8286	8294	13742	13742					0.048394536773685104
GLNLGLMAL	9	Unmodified	_GLNLGLMAL_					0	0	0		ENSG00000158158|ENST00000377075|CNNM4;nc|ENSG00000148842|Q9H8M5-3|CNNM2;nc|ENSG00000148842|Q9H8M5-2|CNNM2;ENSG00000148842|ENST00000369878|CNNM2	ENSG00000158158|ENST00000377075|CNNM4	ENSG00000158158|ENST00000377075|CNNM4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7547302246094	2	451.262413	900.510274	0.55318	0.00024963	2.3955	0.001081	2.9487	0.0013306	451.26314078422547	78.422	1.1268	78.558	77.956	79.082	0.13667					49	33	2	0	0	0	0.20789	1	7423	7423		17.365	0	1	66489			12024	5464	8287	8295	13743	13743					0.05603917030782668
GLNNGEHH	8	Unmodified	_GLNNGEHH_					0	0	0		ENSG00000204740|ENST00000454679|MALRD1	ENSG00000204740|ENST00000454679|MALRD1	ENSG00000204740|ENST00000454679|MALRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.1987609863281	2	439.19919	876.383828	2.7664	0.001215	-2.7509	-0.0012082	0.015504	6.8092E-06	439.1979044520637	101.42	0.60172	101.74	101.6	102.2	0.32511					24	15	2	0	0	0	0.90465	1	12363	12363		40.573	8.6178	1	686280			12025	8485	8288	8296	13744	13744					-0.05930873150145999
GLNNKTIGY	9	Unmodified	_GLNNKTIGY_					0	0	0		nc|ENSG00000133131|Q8TE76-2|MORC4;nc|ENSG00000133131|Q8TE76-3|MORC4;ENSG00000133131|ENST00000355610|MORC4	nc|ENSG00000133131|Q8TE76-2|MORC4	nc|ENSG00000133131|Q8TE76-2|MORC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.26470947265625	2	490.263999	978.513445	-1.7052	-0.000836	1.6754	0.00082141	-0.029775	-1.4597E-05	490.2646683653372	39.615	1.3375	39.983	39.471	40.808	0.36797					70	32	3	0	0	0	0.11055	2	3323	3323;3341		90.37	28.914	1	613620			12026	3862	8289	8297	13745;13746	13745					0.023328834091330464
GLNNKTIGY	9	Unmodified	_GLNNKTIGY_					0	0	0		nc|ENSG00000133131|Q8TE76-2|MORC4;nc|ENSG00000133131|Q8TE76-3|MORC4;ENSG00000133131|ENST00000355610|MORC4	nc|ENSG00000133131|Q8TE76-2|MORC4	nc|ENSG00000133131|Q8TE76-2|MORC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.26416015625	2	490.263999	978.513445	-1.402	-0.00068735	1.3206	0.00064743	-0.08143	-3.9922E-05	490.26450195595595	39.405	1.3647	39.959	39.36	40.724	0.5545					64	31	3	0	0	0	0.051853	4	3310	3299;3310;3322;3335		107.01	46.036	1	486150			12027	3862	8289	8297	13747;13748;13749;13750	13748					0.023328834091330464
GLNPGASSSSA	11	Unmodified	_GLNPGASSSSA_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	474.2224426269531	2	474.225071	946.435589	-0.93694	-0.00044432	-3.9395	-0.0018682	-4.8764	-0.0023125	474.2235736809941	68.894	0.63741	69.03	68.782	69.419	0.13521					61	28	3	0	0	0	0.70584	1	6205	6205		30.569	1.3988	1	348720	+		12028	16905	8290	8298	13751	13751					-0.039771742468929006
GLNRTGIPLS	10	Unmodified	_GLNRTGIPLS_					0	0	0			REV__ENST00000284240.9_1_11:119289572-119289773:-|nuORF	REV__ENST00000284240.9_1_11:119289572-119289773:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.2979125976562	2	514.298373	1026.58219	0.73156	0.00037624	-1.0406	-0.00053517	-0.30902	-0.00015893	514.2979640556221	96.413	1.8767	96.461	95.25	97.127	0.047798					96	43	4	0	0	0	0.86348	1	10231	10231		31.53	3.6476	1	532700	+		12029	24624	8291	8299	13752	13752					0.0699654770885445
GLNVKRII	8	Unmodified	_GLNVKRII_					0	0	0		ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7920227050781	2	456.803094	911.591636	-0.13567	-6.1974E-05	-1.2305	-0.00056211	-1.3662	-0.00062409	456.80243923645554	42.484	0.48865	42.439	42.194	42.683	-0.045471					18	15	2	0	0	0	0.4196	1	2848	2848		42.474	8.9589	1	64350			12030	3129	8292	8300	13753	13753					0.1323036078503037
GLNVVKLA	8	Unmodified	_GLNVVKLA_					0	0	0			REV__ENSG00000189227|ENST00000342683|C15orf61	REV__ENSG00000189227|ENST00000342683|C15orf61	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.2649841308594	2	407.263271	812.511988	0.90913	0.00037025	3.2583	0.001327	4.1674	0.0016972	407.2644921046508	37.981	1.0236	38.294	38.055	39.079	0.31312					54	25	3	0	0	0	0.80706	1	3089	3089		19.36	1.995	1	1112800	+		12031	23071	8293	8301	13754	13754					0.09823294111026826
GLNYLMDAM	9	2 Oxidation (M)	_GLNYLM(Oxidation (M))DAM(Oxidation (M))_		GLNYLM(1)DAM(1)		GLNYLM(69)DAM(69)	0	0	2			REV__ENST00000551915.5_1_12:83081308-83379891:+|nuORF	REV__ENST00000551915.5_1_12:83081308-83379891:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2279052734375	2	530.22791	1058.44127	0.38076	0.00020189	0.070124	3.7182E-05	0.45089	0.00023907	530.2278276884957	29.363	0.92472	29.394	29.053	29.978	0.030947					58	28	3	0	0	0	0.25483	1	1442	1442		68.787	17.451	1	251920	+		12032	22315	8294	8302	13755	13755		337;338			-0.08561535051080682
GLNYLTLI	8	Unmodified	_GLNYLTLI_					0	0	0			REV__ENSG00000197977|ENST00000354666|ELOVL2	REV__ENSG00000197977|ENST00000354666|ELOVL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.7682800292969	2	453.768386	905.522219	0.25004	0.00011346	-0.61915	-0.00028095	-0.36911	-0.00016749	453.7679700312921	49.356	0.92676	49.356	48.925	49.852	0.00016785					35	20	2	0	0	0	0.88944	1	4159	4159		57.811	2.3071	1	174510	+		12033	23284	8295	8303	13756	13756					0.06567857045627079
GLPAGHRHL	9	Unmodified	_GLPAGHRHL_					0	0	0		ENST00000533786.5_1_11:44881945-44931425:+|nuORF	ENST00000533786.5_1_11:44881945-44931425:+|nuORF	ENST00000533786.5_1_11:44881945-44931425:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2729187011719	2	479.272493	956.530432	2.2912	0.0010981	-1.8257	-0.00087499	0.46557	0.00022314	479.2714500709969	101.78	0.95604	102.04	101.69	102.65	0.26322					54	23	3	0	0	0	0.69914	1	12333	12333		40.573	1.5511	1	2783100			12034	13402	8296	8304	13757	13757					0.050428488055899834
GLPASAVHGP	10	Unmodified	_GLPASAVHGP_					0	0	0		ENST00000340634.4_1_3:142681054-142682041:-|nuORF	ENST00000340634.4_1_3:142681054-142682041:-|nuORF	ENST00000340634.4_1_3:142681054-142682041:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.2449951171875	2	453.245609	904.476666	0.16896	7.6579E-05	3.5283	0.0015992	3.6972	0.0016758	453.2470272514559	30.95	0.62531	30.969	30.712	31.337	0.018362					29	17	2	0	0	0	0.777	1	1656	1656		40.573	1.7665	1	64987			12035	10234	8297	8305	13758	13758					0.02060631583231043
GLPDPPED	8	Unmodified	_GLPDPPED_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.19140625	2	420.192708	838.370863	-1.8849	-0.00079204	-1.1381	-0.00047822	-3.023	-0.0012703	420.192116172397	93.945	2.7081	94.143	92.357	95.065	0.19827					82	64	2	0	0	0	0.884	1	9516	9516		33.516	3.0119	1	1157900			12036	15003;5274	8298	8306	13759	13759					-0.05478749052906551
GLPLAIFFPL	10	Unmodified	_GLPLAIFFPL_					0	0	0			REV__ENSG00000170214|ENST00000306675|ADRA1B	REV__ENSG00000170214|ENST00000306675|ADRA1B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.3328857421875	2	544.331153	1086.64775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.441	1	98.386	97.886	98.886	-0.054817								0	0	0	0.45132	1	10620	10620		35.201	6.0512	1		+		12037	21636	8299	8307	13760	13760					0.10789568901850544
GLPLALLGP	9	Unmodified	_GLPLALLGP_					0	0	0			REV__ENST00000300737.8_1_11:3876932-3877493:+|nuORF	REV__ENST00000300737.8_1_11:3876932-3877493:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.2467346191406	2	425.773471	849.53239	0.71967	0.00030642	2.5839	0.0011002	3.3036	0.0014066	425.77434272408897	84.85	0.30531	84.778	84.541	84.847	-0.07196					9	6	2	0	0	0	0.20789	1	8689	8689		29.842	15.177	1	21755	+		12038	24754	8300	8308	13761	13761					0.10160464770865474
GLPLCGVPPL	10	Unmodified	_GLPLCGVPPL_					0	0	0			REV__ENST00000568164.1_1_16:75148422-75149226:-|nuORF	REV__ENST00000568164.1_1_16:75148422-75149226:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.7104187011719	2	483.278063	964.541574	0.73654	0.00035596	0.73002	0.0003528	1.4666	0.00070876	483.2784389878966	95.093	2.0041	95.256	94.701	96.705	0.16307					124	47	4	0	0	0	0.37624	1	9887	9887		35.201	15.841	1	1266400	+		12039	28893	8301	8309	13762	13762					0.05788490064855978
GLPLMVIIHKS	11	Unmodified	_GLPLMVIIHKS_					0	0	0		ENSG00000117862|ENST00000371626|TXNDC12	ENSG00000117862|ENST00000371626|TXNDC12	ENSG00000117862|ENST00000371626|TXNDC12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3666381835938	2	604.365201	1206.71585	2.3603	0.0014265	0.029722	1.7963E-05	2.39	0.0014444	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.75921	1	12935	12935		19.997	9.7315	1	5984800			12040	3003	8302	8310	13763	13763					0.12076070490184065
GLPSKPRKVWR	11	Unmodified	_GLPSKPRKVWR_					0	0	0		ENST00000375604.6_1_13:113656065-113656206:+|nuORF	ENST00000375604.6_1_13:113656065-113656206:+|nuORF	ENST00000375604.6_1_13:113656065-113656206:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.94000244140625	3	441.938451	1322.79352	-0.49593	-0.00021917	3.7819	0.0016714	3.286	0.0014522	441.9399207304678	55.239	1.1399	55.213	54.702	55.842	-0.026581					95	31	4	0	0	0	0.75779	1	5050	5050		20.315	3.7852	1	363460			12041	10800	8303	8311	13764	13764					0.14503844470573313
GLPVHAERQL	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GLPVHAERQL_					1	0	0			REV__ENSG00000115594|ENST00000410023|IL1R1	REV__ENSG00000115594|ENST00000410023|IL1R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.8258056640625	2	581.32238	1160.63021	0.54788	0.00031849	2.9069	0.0016898	3.4548	0.0020083	581.323882197196	63.705	0.50563	63.828	63.602	64.107	0.12252					36	20	2	0	0	0	0.64457	1	5605	5605		47.657	8.8512	1	128950	+		12042	18132	8304	8312	13765	13765					0.05631621628890571
GLPVSQHL	8	Unmodified	_GLPVSQHL_					0	0	0			REV__ENSG00000172927|ENST00000441339|MYEOV	REV__ENSG00000172927|ENST00000441339|MYEOV	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.294921875	2	425.742702	849.470852	0.51156	0.00021779	-1.4407	-0.00061336	-0.92912	-0.00039556	425.74184255909444	76.05	1.3802	76.184	75.398	76.779	0.13325					80	41	3	0	0	0	0.4196	1	7004	7004		60.294	12.378	1	193960	+		12043	21864	8305	8313	13766	13766					0.04009533071575788
GLQAKIQEAKE	11	Unmodified	_GLQAKIQEAKE_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5638732910156	3	405.562827	1213.66665	1.5319	0.00062128	3.2091	0.0013015	4.741	0.0019228	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.7144	1	5879	5879		25.892	0	1	245170			12044	14756	8306	8314	13767	13767					0.06836453734922543
GLQLELLKPLW	11	Unmodified	_GLQLELLKPLW_					0	0	0			REV__ENST00000568176.5_2_15:74967332-74988325:-|nuORF	REV__ENST00000568176.5_2_15:74967332-74988325:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2673034667969	3	437.267463	1308.78056	-0.73822	-0.0003228	1.6574	0.00072472	0.91917	0.00040192	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.78683	1	4658	4658		14.086	0	1	3639500	+		12045	28894	8307	8315	13768	13768					0.1385196856786024
GLQLLCEVINL	11	Unmodified	_GLQLLCEVINL_					0	0	0			REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.565185546875	3	405.565291	1213.67404	-0.18903	-7.6663E-05	-1.1296	-0.00045811	-1.3186	-0.00053477	405.56470246140424	60.148	1.7799	60.134	59.159	60.939	-0.013729					123	48	3	0	0	0	0.74771	1	5541	5541		22.562	0.87584	1	242840	+		12046	19887	8308	8316	13769	13769					0.0757547001101102
GLRAGKPTAS	10	Unmodified	_GLRAGKPTAS_					0	0	0		nc|ENSG00000143322|P42684-2|ABL2;nc|ENSG00000143322|P42684-6|ABL2;nc|ENSG00000143322|P42684-3|ABL2;ENSG00000143322|ENST00000502732|ABL2	nc|ENSG00000143322|P42684-2|ABL2	nc|ENSG00000143322|P42684-2|ABL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2776184082031	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.86471	2	7869	7869;8020		30.318	2.4355	1	4644500			12047	4618	8309	8317	13770;13771	13770					0.06031992020302823
GLRAGKPTAS	10	Unmodified	_GLRAGKPTAS_					0	0	0		nc|ENSG00000143322|P42684-2|ABL2;nc|ENSG00000143322|P42684-6|ABL2;nc|ENSG00000143322|P42684-3|ABL2;ENSG00000143322|ENST00000502732|ABL2	nc|ENSG00000143322|P42684-2|ABL2	nc|ENSG00000143322|P42684-2|ABL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2774353027344	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.86047	2	8638	8638;9068		25.574	1.3713	1	7289200			12048	4618	8309	8317	13772;13773	13772					0.06031992020302823
GLRAGKPTAS	10	Unmodified	_GLRAGKPTAS_					0	0	0		nc|ENSG00000143322|P42684-2|ABL2;nc|ENSG00000143322|P42684-6|ABL2;nc|ENSG00000143322|P42684-3|ABL2;ENSG00000143322|ENST00000502732|ABL2	nc|ENSG00000143322|P42684-2|ABL2	nc|ENSG00000143322|P42684-2|ABL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773742675781	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.85981	1	8154	8154		35.152	7.0705	1	2046100			12049	4618	8309	8317	13774	13774					0.06031992020302823
GLRAGKPTAS	10	Unmodified	_GLRAGKPTAS_					0	0	0		nc|ENSG00000143322|P42684-2|ABL2;nc|ENSG00000143322|P42684-6|ABL2;nc|ENSG00000143322|P42684-3|ABL2;ENSG00000143322|ENST00000502732|ABL2	nc|ENSG00000143322|P42684-2|ABL2	nc|ENSG00000143322|P42684-2|ABL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27783203125	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.85981	1	8681	8681		35.152	4.8343	1	7040000			12050	4618	8309	8317	13775	13775					0.06031992020302823
GLRAGKSH	8	Unmodified	_GLRAGKSH_					0	0	0			REV__nc|ENSG00000172752|A8TX70-2|COL6A5	REV__nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.23779296875	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.88601	1	7746	7746		34.173	9.6685	1	2127000	+		12051	21854	8310	8318	13776	13776					0.04243184505889985
GLRAGKSH	8	Unmodified	_GLRAGKSH_					0	0	0			REV__nc|ENSG00000172752|A8TX70-2|COL6A5	REV__nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.23760986328125	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.91472	1	7508	7508		44.117	9.9443	1	2012200	+		12052	21854	8310	8318	13777	13777					0.04243184505889985
GLRAGKSH	8	Unmodified	_GLRAGKSH_					0	0	0			REV__nc|ENSG00000172752|A8TX70-2|COL6A5	REV__nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2371826171875	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.90523	1	7480	7480		40.778	6.6056	1	1692300	+		12053	21854	8310	8318	13778	13778					0.04243184505889985
GLRAGKSH	8	Unmodified	_GLRAGKSH_					0	0	0			REV__nc|ENSG00000172752|A8TX70-2|COL6A5	REV__nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2376708984375	2	413.238119	824.461684	-0.091267	-3.7715E-05	0.27761	0.00011472	0.18635	7.7005E-05	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.89679	1	8880	8880		37.812	2.1932	1	1247200	+		12054	21854	8310	8318	13779	13779					0.04243184505889985
GLRAKGPGGT	10	Unmodified	_GLRAKGPGGT_					0	0	0		ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1;ENST00000522727.5_1_8:37735063-37756959:-|nuORF	ENSG00000156675|ENST00000330843|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.263671875	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.86587	1	7492	7492		29.17	0.020503	1	1032000			12055	5388	8311	8319	13780	13780					0.05435722848869773
GLRAKGPGGT	10	Unmodified	_GLRAKGPGGT_					0	0	0		ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1;ENST00000522727.5_1_8:37735063-37756959:-|nuORF	ENSG00000156675|ENST00000330843|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26361083984375	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.82886	1	8160	8160		37.812	2.1932	1	4061400			12056	5388	8311	8319	13781	13781					0.05435722848869773
GLRAPQFQ	8	Unmodified	_GLRAPQFQ_					0	0	0			REV__ENSG00000172382|ENST00000302641|PRSS27	REV__ENSG00000172382|ENST00000302641|PRSS27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.25408935546875	2	458.753601	915.49265	1.1793	0.00054099	-4.175	-0.0019153	-2.9957	-0.0013743	458.75130962594056	23.717	1.8273	23.143	22.747	24.574	-0.57415					83	41	4	0	0	0	0.84634	1	1061	1061		60.294	4.7898	1	885740	+		12057	21828	8312	8320	13782	13782					0.03152337820131379
GLRDGLFSC	9	Unmodified	_GLRDGLFSC_					0	0	0		ENST00000441339.2_11:69061685-69061946:+|nuORF	ENST00000441339.2_11:69061685-69061946:+|nuORF	ENST00000441339.2_11:69061685-69061946:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.2362060546875	2	484.236927	966.459301	-0.090856	-4.3996E-05	-1.4767	-0.00071509	-1.5676	-0.00075909	484.2361457331885	85.202	0.6129	85.269	84.853	85.466	0.067261					42	13	4	0	0	0	0.58668	1	8532	8532		47.657	5.2612	1	1388800			12058	11782	8313	8321	13783	13783					-0.025270320140862168
GLRDQTLHQ	9	Unmodified	_GLRDQTLHQ_					0	0	0			REV__nc|ENSG00000172493|P51825|AFF1	REV__nc|ENSG00000172493|P51825|AFF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	534.2833862304688	2	534.283254	1066.55196	-0.041397	-2.2117E-05	1.589	0.000849	1.5477	0.00082688	534.2840335710216	109.14	0.481	109.09	108.79	109.27	-0.049332					38	23	2	0	0	0	0.7932	1	11891	11891		25.574	0	1	1404000	+		12059	21837	8314	8322	13784	13784					0.021341890436588073
GLREGRDM	8	Unmodified	_GLREGRDM_					0	0	0			REV__ENST00000548783.1_1_12:77256954-77257125:-|nuORF	REV__ENST00000548783.1_1_12:77256954-77257125:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.23297119140625	2	467.232176	932.449799	-0.78556	-0.00036704	3.411	0.0015937	2.6254	0.0012267	467.2336097851308	69.799	1.6914	69.762	69.451	71.142	-0.036964					147	87	2	0	0	0	0.87064	1	6753	6753		29.15	0.89528	1	4050000	+		12060	22047	8315	8323	13785	13785					-0.019128002996012583
GLRFSRRLG	9	Unmodified	_GLRFSRRLG_					0	0	0			REV__ENSG00000161647|ENST00000398389|MPP3	REV__ENSG00000161647|ENST00000398389|MPP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.3179931640625	2	531.319974	1060.6254	-0.033063	-1.7567E-05	-1.1196	-0.00059484	-1.1526	-0.00061241	531.3191547732448	95.172	2.5483	95.24	94.714	97.262	0.068336					181	59	5	0	0	0	0.78124	1	10057	10057		30.318	2.4355	1	3878900	+		12061	20772	8316	8324	13786	13786					0.09750782276796599
GLRGFIGFPGL	11	Unmodified	_GLRGFIGFPGL_					0	0	0		ENSG00000081052|ENST00000396625|COL4A4	ENSG00000081052|ENST00000396625|COL4A4	ENSG00000081052|ENST00000396625|COL4A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3302001953125	2	567.326934	1132.63931	1.3743	0.0007797	3.9991	0.0022688	5.3735	0.0030485	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.7342	1	10871	10871		25.574	1.3713	1	6182600			12062	1459	8317	8325	13787	13787					0.07830014985211164
GLRGLHLSS	9	Unmodified	_GLRGLHLSS_					0	0	0		ENSG00000184545|ENST00000397374|DUSP8	ENSG00000184545|ENST00000397374|DUSP8	ENSG00000184545|ENST00000397374|DUSP8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.2716064453125	2	470.272158	938.529764	0.69739	0.00032796	-0.70102	-0.00032967	-0.0036337	-1.7088E-06	470.2717761018985	92.152	2.8924	92.309	91.308	94.201	0.15649					149	68	4	0	0	0	0.78058	1	9286	9286		30.504	1.3541	1	1938200			12063	7620	8318	8326	13788	13788					0.05804009365908769
GLRHIAFQVVV	11	Unmodified	_GLRHIAFQVVV_					0	0	0			REV__ENST00000477016.5_1_6:31656024-31659403:-|nuORF	REV__ENST00000477016.5_1_6:31656024-31659403:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8694458007812	2	619.87204	1237.72953	-1.2246	-0.00075909	-2.9733	-0.001843	-4.1979	-0.0026021	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.75921	1	9684	9684		19.997	2.5288	1	6224400	+		12064	23492	8319	8327	13789	13789					0.12017064313636183
GLRHPLPHGVR	11	Unmodified	_GLRHPLPHGVR_					0	0	0			REV__ENST00000432802.6_1_20:25028753-25038655:-|nuORF	REV__ENST00000432802.6_1_20:25028753-25038655:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8695678710938	2	619.86508	1237.71561	4.6432	0.0028781	2.2798	0.0014132	6.923	0.0042913	619.8662722142382	105.81	1.0194	106	105.44	106.46	0.18647					62	31	3	0	0	0	0.6921	1	12944	12944		32.812	0	1	193730	+		12065	26637	8320	8328	13790	13790					0.10625831605216263
GLRKAPPFP	9	Unmodified	_GLRKAPPFP_					0	0	0		ENST00000498500.1_1_1:155165634-155166210:-|nuORF	ENST00000498500.1_1_1:155165634-155166210:-|nuORF	ENST00000498500.1_1_1:155165634-155166210:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7957458496094	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.7932	1	3653	3653		19.36	0	1	1502200			12066	12827	8321	8329	13791	13791					0.08446074267988024
GLRKGHGT	8	Unmodified	_GLRKGHGT_					0	0	0		ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.23773193359375	2	413.238119	824.461684	-1.33	-0.0005496	2.1463	0.00088694	0.81635	0.00033735	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.87064	2	7199	7191;7199		37.159	3.6435	1	895630			12067	3672;14907	8322	8330	13792;13793	13793					0.04243184505912723
GLRKGHGT	8	Unmodified	_GLRKGHGT_					0	0	0		ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.23822021484375	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.86677	1	7507	7507		27.882	4.8398	1	1747900			12068	3672;14907	8322	8330	13794	13794					0.04243184505912723
GLRKGHGT	8	Unmodified	_GLRKGHGT_					0	0	0		ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2373352050781	2	413.238119	824.461684	-0.12335	-5.0972E-05	0.56146	0.00023202	0.43812	0.00018105	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.84341	1	7386	7386		24.203	2.5004	1	1978800			12069	3672;14907	8322	8330	13795	13795					0.04243184505912723
GLRKGHGT	8	Unmodified	_GLRKGHGT_					0	0	0		ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2381286621094	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.88601	2	7565	7565;7625		35.618	5.1146	1	2127000			12070	3672;14907	8322	8330	13796;13797	13796					0.04243184505912723
GLRKGHGT	8	Unmodified	_GLRKGHGT_					0	0	0		ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2374267578125	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.85277	4	7494	6855;6896;7122;7494		44.117	7.736	1	2012200			12071	3672;14907	8322	8330	13798;13799;13800;13801	13801					0.04243184505912723
GLRKGHGT	8	Unmodified	_GLRKGHGT_					0	0	0		ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.23724365234375	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.87064	1	6886	6886		29.15	0.89528	1	1692300			12072	3672;14907	8322	8330	13802	13802					0.04243184505912723
GLRKGHGT	8	Unmodified	_GLRKGHGT_					0	0	0		ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1;nc|ENSG00000130720|Q8N539-2|FIBCD1	ENSG00000130720|ENST00000372338|FIBCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2380065917969	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.86677	3	7337	7240;7337;7362		38.806	1.647	1	1341700			12073	3672;14907	8322	8330	13803;13804;13805	13804					0.04243184505912723
GLRKVSRYVSL	11	Unmodified	_GLRKVSRYVSL_					0	0	0			REV__ENSG00000142892|ENST00000370812|PIGK	REV__ENSG00000142892|ENST00000370812|PIGK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.59454345703125	3	426.594461	1276.76155	1.4588	0.00062231	-1.374	-0.00058612	0.084831	3.6188E-05	426.5938475594282	33.45	1.3653	33.448	33.012	34.377	-0.0016327					74	30	4	0	0	0	0.6493	1	1971	1971		34.501	2.4668	1	453100	+		12074	19759	8323	8331	13806	13806					0.13424431996804742
GLRLIKIQLCL	11	Unmodified	_GLRLIKIQLCL_					0	0	0			REV__nc|ENSG00000174953|Q9H2U1-3|DHX36	REV__nc|ENSG00000174953|Q9H2U1-3|DHX36	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	635.4075927734375	2	635.407401	1268.80025	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.923	1	15.923	15.423	16.423	0								0	0	0	0.56276	1	77	77		14.865	0.72775	1		+		12075	22030	8324	8332	13807	13807					0.17660021306983253
GLRLLRGWPQ	10	Unmodified	_GLRLLRGWPQ_					0	0	0			REV__ENST00000535181.5_1_12:133448808-133463914:-|nuORF	REV__ENST00000535181.5_1_12:133448808-133463914:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.85693359375	2	598.356557	1194.69856	1.6651	0.0009963	2.883	0.001725	4.548	0.0027213	598.3583175004217	94.283	4.5904	94.715	93.221	97.812	0.4324					199	114	2	0	0	0	0.8651	1	11084	11084		25.574	2.0514	1	27623000	+		12076	16651	8325	8333	13808	13808					0.10899910999410167
GLRLSQLLARL	11	Unmodified	_GLRLSQLLARL_					0	0	0			REV__ENST00000396573.6_1_16:10275896-10276515:-|nuORF	REV__ENST00000396573.6_1_16:10275896-10276515:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.9325256347656	3	413.934706	1238.78229	-1.0065	-0.00041663	-3.7709	-0.0015609	-4.7774	-0.0019775	413.93306098265026	44.954	2.5911	44.923	43.876	46.467	-0.031067					192	60	4	0	0	0	0.77205	1	3593	3593		17.167	1.16	1	748080	+		12077	26146	8326	8334	13809	13809					0.1724502237645993
GLRMEGRLWV	10	Unmodified	_GLRMEGRLWV_					0	0	0		ENST00000574710.1_1_17:4841038-4842521:-|nuORF	ENST00000574710.1_1_17:4841038-4842521:-|nuORF	ENST00000574710.1_1_17:4841038-4842521:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.8373413085938	2	608.8346	1215.65465	2.5696	0.0015645	2.2749	0.0013851	4.8445	0.0029495	608.8359461538699	110.06	0.58868	110.12	109.94	110.52	0.054062					49	20	3	0	0	0	0.80179	1	13327	13327		39.253	4.1008	1	4210900			12078	14036	8327	8335	13810	13810					0.05544558510769093
GLRNPFLVP	9	Unmodified	_GLRNPFLVP_					0	0	0			REV__nc|ENSG00000140987|Q9NX65-3|ZSCAN32	REV__nc|ENSG00000140987|Q9NX65-3|ZSCAN32	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	507.29168701171875	2	506.800552	1011.58655	-0.49867	-0.00025273	1.4784	0.00074926	0.97973	0.00049653	506.80125930962566	45.611	0.78478	45.623	45.395	46.179	0.012058					40	21	2	0	0	0	0.77546	1	3360	3360		31.955	7.7521	1	207840	+		12079	19653	8328	8336	13811	13811					0.08122056922422871
GLRNSPLPARP	11	Unmodified	_GLRNSPLPARP_					0	0	0			REV__ENST00000548483.5_2_12:94288230-94288398:+|nuORF	REV__ENST00000548483.5_2_12:94288230-94288398:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3428955078125	2	589.343646	1176.67274	-0.36759	-0.00021664	-0.80413	-0.00047391	-1.1717	-0.00069055	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.65746	1	9451	9451		37.812	1.3648	1	11103000	+		12080	28574	8329	8337	13812	13812					0.09147016757128767
GLRNSPLPARP	11	Unmodified	_GLRNSPLPARP_					0	0	0			REV__ENST00000548483.5_2_12:94288230-94288398:+|nuORF	REV__ENST00000548483.5_2_12:94288230-94288398:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3426513671875	2	589.343646	1176.67274	-0.65315	-0.00038493	-0.88363	-0.00052076	-1.5368	-0.00090569	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.72106	1	9636	9636		28.081	1.3886	1	5584100	+		12081	28574	8329	8337	13813	13813					0.09147016757128767
GLRNSPLPARP	11	Unmodified	_GLRNSPLPARP_					0	0	0			REV__ENST00000548483.5_2_12:94288230-94288398:+|nuORF	REV__ENST00000548483.5_2_12:94288230-94288398:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3426513671875	2	589.343646	1176.67274	-0.65438	-0.00038565	-0.61013	-0.00035958	-1.2645	-0.00074523	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.66929	1	10006	10006		36.447	1.2947	1	16804000	+		12082	28574	8329	8337	13814	13814					0.09147016757128767
GLRNSPLPARP	11	Unmodified	_GLRNSPLPARP_					0	0	0			REV__ENST00000548483.5_2_12:94288230-94288398:+|nuORF	REV__ENST00000548483.5_2_12:94288230-94288398:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3426513671875	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.72106	1	9941	9941		28.081	2.5074	1	17904000	+		12083	28574	8329	8337	13815	13815					0.09147016757128767
GLRPGLIFPG	10	Unmodified	_GLRPGLIFPG_					0	0	0			REV__ENSG00000196182|ENST00000373132|STK40	REV__ENSG00000196182|ENST00000373132|STK40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8079833984375	2	513.808377	1025.6022	-0.38547	-0.00019806	1.7192	0.00088333	1.3337	0.00068527	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.86589	1	3815	3815		29.15	7.1897	1	1377600	+		12084	23100	8330	8338	13816	13816					0.09042343439477918
GLRPPEGFV	9	Unmodified	_GLRPPEGFV_					0	0	0		ENST00000568288.5_1_16:1359654-1370175:+|nuORF	ENST00000568288.5_1_16:1359654-1370175:+|nuORF	ENST00000568288.5_1_16:1359654-1370175:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.26715087890625	2	486.269084	970.523616	-1.0289	-0.00050034	-2.8077	-0.0013653	-3.8366	-0.0018656	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.58668	1	8259	8259		47.657	8.8512	1	1182200			12085	13960	8331	8339	13817	13817					0.0371749113437545
GLRPPRPRN	9	Unmodified	_GLRPPRPRN_					0	0	0		ENST00000573685.5_1_16:68573279-68591907:+|nuORF;ENST00000570495.5_1_16:68573279-68591907:+|nuORF;ENST00000562156.5_1_16:68573203-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8167724609375	2	531.817599	1061.62064	1.595	0.00084823	-2.9849	-0.0015874	-1.3899	-0.00073919	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.7932	1	8988	8988		24.203	1.1603	1	1345000			12086	14023	8332	8340	13818	13818					0.09229898134049108
GLRPPRPRN	9	Unmodified	_GLRPPRPRN_					0	0	0		ENST00000573685.5_1_16:68573279-68591907:+|nuORF;ENST00000570495.5_1_16:68573279-68591907:+|nuORF;ENST00000562156.5_1_16:68573203-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8170166015625	2	531.817599	1061.62064	1.1723	0.00062347	-2.558	-0.0013604	-1.3857	-0.00073692	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.7932	2	9173	9173;9197		24.203	1.1603	1	4413000			12087	14023	8332	8340	13819;13820	13819					0.09229898134049108
GLRPPRPRN	9	Unmodified	_GLRPPRPRN_					0	0	0		ENST00000573685.5_1_16:68573279-68591907:+|nuORF;ENST00000570495.5_1_16:68573279-68591907:+|nuORF;ENST00000562156.5_1_16:68573203-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8168334960938	2	531.817599	1061.62064	0.7269	0.00038658	-2.1356	-0.0011358	-1.4087	-0.00074918	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.7932	3	8744	8744;8839;8875		24.203	1.1603	1	4496300			12088	14023	8332	8340	13821;13822;13823	13821					0.09229898134049108
GLRPPYPTA	9	Unmodified	_GLRPPYPTA_					0	0	0		ENSG00000173801|ENST00000393931|JUP	ENSG00000173801|ENST00000393931|JUP	ENSG00000173801|ENST00000393931|JUP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.2669677734375	2	486.269084	970.523616	-0.72647	-0.00035326	-3.2279	-0.0015696	-3.9543	-0.0019229	486.2674012957117	86.085	5.1254	86.27	85.016	90.141	0.18522					327	120	4	0	0	0	0.64922	1	8636	8636		44.117	0	1	1830000			12089	6886	8333	8341	13824	13824					0.037174911343640815
GLRQRVPDPLE	11	Unmodified	_GLRQRVPDPLE_					0	0	0			REV__ENST00000494919.1_1_2:62729532-62733264:-|nuORF	REV__ENST00000494919.1_1_2:62729532-62733264:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3596801757812	2	640.359493	1278.70443	-0.024279	-1.5547E-05	-0.77441	-0.0004959	-0.79869	-0.00051145	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.69248	1	10208	10208		32.751	6.0576	1	448130	+		12090	22888	8334	8342	13825	13825					0.07622964720439995
GLRQSAKEL	9	Unmodified	_GLRQSAKEL_					0	0	0			REV__ENST00000408991.3_1_19:49621717-49621960:-|nuORF	REV__ENST00000408991.3_1_19:49621717-49621960:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.290283203125	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.77244	1	9109	9109		32.812	3.6424	1	9565500	+		12091	26327	8335	8343	13826	13826					0.06628261191792717
GLRQSAKEL	9	Unmodified	_GLRQSAKEL_					0	0	0			REV__ENST00000408991.3_1_19:49621717-49621960:-|nuORF	REV__ENST00000408991.3_1_19:49621717-49621960:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2903747558594	2	501.290548	1000.56654	-0.45423	-0.0002277	0.14645	7.3413E-05	-0.30779	-0.00015429	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.67345	1	10132	10132		42.396	0	1	9727400	+		12092	26327	8335	8343	13827	13827					0.06628261191792717
GLRQSAKEL	9	Unmodified	_GLRQSAKEL_					0	0	0			REV__ENST00000408991.3_1_19:49621717-49621960:-|nuORF	REV__ENST00000408991.3_1_19:49621717-49621960:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2911682128906	2	501.290548	1000.56654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.299	1	89.769	89.269	90.269	0.47068								0	0	0	0.29475	1	10579	10579		32.812	2.4947	1		+		12093	26327	8335	8343	13828	13828					0.06628261191792717
GLRQVVAPPRA	11	Unmodified	_GLRQVVAPPRA_					0	0	0		ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3538818359375	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.53	1	117.51	117.01	118.01	-0.02433								0	0	0	0.56276	1	13011	13011		26.693	5.746	1				12094	1760	8336	8344	13829	13829					0.11863607136797327
GLRRKEPGVHV	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))GLRRKEPGVHV_					1	0	0			REV__ENST00000393085.3_1_7:135661801-135661864:-|nuORF	REV__ENST00000393085.3_1_7:135661801-135661864:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.9224548339844	3	430.586077	1288.7364	1.3367	0.00057555	0.23499	0.00010118	1.5717	0.00067673	430.58510468313744	33.698	1.0363	34.003	33.617	34.653	0.30494					80	24	5	0	0	0	0.49623	1	2455	2455		52.167	12.109	1	1577500	+		12095	26045	8337	8345	13830	13830					0.10358377194233981
GLRRPLLAQ	9	Unmodified	_GLRRPLLAQ_					0	0	0			REV__ENST00000264712.7_1_2:26205012-26205078:-|nuORF	REV__ENST00000264712.7_1_2:26205012-26205078:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.3245849609375	2	512.324725	1022.6349	0.9839	0.00050408	-1.2426	-0.00063659	-0.25866	-0.00013252	512.324091379389	21.2	0.73422	20.741	20.395	21.129	-0.4591					30	17	2	0	0	0	0.69914	1	731	731		40.573	4.9543	1	143260	+		12096	24480	8338	8346	13831	13831					0.12448550562316996
GLRRPVTT	8	Unmodified	_GLRRPVTT_					0	0	0			REV__ENSG00000137154|ENST00000380394|RPS6	REV__ENSG00000137154|ENST00000380394|RPS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2745361328125	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.87922	1	9760	9760		31.955	1.4512	1	47650000	+		12097	19365	8339	8347	13832	13832					0.08152313228504227
GLRRRIFN	8	Unmodified	_GLRRRIFN_					0	0	0			REV__ENSG00000007001|ENST00000005756|UPP2	REV__ENSG00000007001|ENST00000005756|UPP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.814697265625	2	516.314692	1030.61483	0.86902	0.00044869	-2.1089	-0.0010889	-1.2399	-0.00064016	516.3134632199627	112.89	2.8792	112.91	112.73	115.61	0.028854					110	77	2	0	0	0	0.86288	1	12424	12424		26.796	2.5934	1	336880	+		12098	16115	8340	8348	13833	13833					0.10074799622361752
GLRSCFPPG	9	Unmodified	_GLRSCFPPG_					0	0	0		ENSG00000103404|ENST00000219689|USP31	ENSG00000103404|ENST00000219689|USP31	ENSG00000103404|ENST00000219689|USP31	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.2333679199219	2	467.234187	932.453822	-1.3963	-0.0006524	-0.15861	-7.411E-05	-1.5549	-0.00072651	467.23387854623877	68.403	0.92169	68.403	68.094	69.016	0					94	38	3	0	0	0	0.76764	1	6078	6078		34.173	2.6427	1	339590			12099	2081	8341	8349	13834	13834					-0.01510710805882809
GLRSCFPPG	9	Unmodified	_GLRSCFPPG_					0	0	0		ENSG00000103404|ENST00000219689|USP31	ENSG00000103404|ENST00000219689|USP31	ENSG00000103404|ENST00000219689|USP31	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2342224121094	2	467.234187	932.453822	-1.043	-0.00048731	-0.63234	-0.00029545	-1.6753	-0.00078276	467.23370254393717	68.31	1.3377	68.343	68.023	69.361	0.033005					128	53	3	0	0	0	0.76255	1	6565	6565		35.618	2.1027	1	1288900			12100	2081	8341	8349	13835	13835					-0.01510710805882809
GLRSCFPPG	9	Unmodified	_GLRSCFPPG_					0	0	0		ENSG00000103404|ENST00000219689|USP31	ENSG00000103404|ENST00000219689|USP31	ENSG00000103404|ENST00000219689|USP31	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2328186035156	2	467.234187	932.453822	-0.9513	-0.00044448	-0.74459	-0.0003479	-1.6959	-0.00079238	467.2337078119893	69.729	1.4716	69.765	69.399	70.87	0.035614					135	74	2	0	0	0	0.76255	1	6710	6710		35.618	3.6634	1	2912300			12101	2081	8341	8349	13836	13836					-0.01510710805882809
GLRSIRQRVL	10	Unmodified	_GLRSIRQRVL_					0	0	0			REV__ENST00000483448.1_1_7:105752534-105753020:-|nuORF	REV__ENST00000483448.1_1_7:105752534-105753020:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.37939453125	2	599.380563	1196.74657	3.2712	0.0019607	-4.2058	-0.0025209	-0.93465	-0.00056021	599.3778849492661	103.51	3.7036	103.46	103.04	106.74	-0.043755					239	88	5	0	0	0	0.86348	1	11409	11409		31.53	1.0262	1	11967000	+		12102	27489	8342	8350	13837	13837					0.15606984919463684
GLRSIRQRVL	10	Unmodified	_GLRSIRQRVL_					0	0	0			REV__ENST00000483448.1_1_7:105752534-105753020:-|nuORF	REV__ENST00000483448.1_1_7:105752534-105753020:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3794555664062	2	599.380563	1196.74657	0.97491	0.00058434	-1.8328	-0.0010985	-0.85787	-0.00051419	599.3792959797308	103.23	2.9032	103.41	102.97	105.87	0.18297					219	73	5	0	0	0	0.77314	1	11005	11005		40.778	6.6056	1	22539000	+		12103	27489	8342	8350	13838	13838					0.15606984919463684
GLRSIRQRVL	10	Unmodified	_GLRSIRQRVL_					0	0	0			REV__ENST00000483448.1_1_7:105752534-105753020:-|nuORF	REV__ENST00000483448.1_1_7:105752534-105753020:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3787841796875	2	599.380563	1196.74657	-1.2913	-0.00077396	0.50428	0.00030226	-0.78699	-0.0004717	599.3806932084216	103.36	2.8938	103.47	103.07	105.96	0.11494					245	72	6	0	0	0	0.67571	1	10970	10970		45.972	1.5951	1	20299000	+		12104	27489	8342	8350	13839	13839					0.15606984919463684
GLRSKAAPSA	10	Unmodified	_GLRSKAAPSA_					0	0	0		ENSG00000261949|ENST00000610896|GFY;chr19:49424009-49425453|25|22.4|0.0|21.1|+|ENST00000576655|GFY,GFY	ENSG00000261949|ENST00000610896|GFY	ENSG00000261949|ENST00000610896|GFY	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27899169921875	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.85981	1	8127	8127		35.152	0.97948	1	4644500			12105	288	8343	8351	13840	13840					0.06031992020314192
GLRSKAAPSA	10	Unmodified	_GLRSKAAPSA_					0	0	0		ENSG00000261949|ENST00000610896|GFY;chr19:49424009-49425453|25|22.4|0.0|21.1|+|ENST00000576655|GFY,GFY	ENSG00000261949|ENST00000610896|GFY	ENSG00000261949|ENST00000610896|GFY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.277587890625	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.86106	1	8051	8051		33.922	0.40605	1	2046100			12106	288	8343	8351	13841	13841					0.06031992020314192
GLRSKAAPSA	10	Unmodified	_GLRSKAAPSA_					0	0	0		ENSG00000261949|ENST00000610896|GFY;chr19:49424009-49425453|25|22.4|0.0|21.1|+|ENST00000576655|GFY,GFY	ENSG00000261949|ENST00000610896|GFY	ENSG00000261949|ENST00000610896|GFY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2779541015625	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.86047	1	7753	7753		23.523	0.48021	1	2142700			12107	288	8343	8351	13842	13842					0.06031992020314192
GLRSKAAPSA	10	Unmodified	_GLRSKAAPSA_					0	0	0		ENSG00000261949|ENST00000610896|GFY;chr19:49424009-49425453|25|22.4|0.0|21.1|+|ENST00000576655|GFY,GFY	ENSG00000261949|ENST00000610896|GFY	ENSG00000261949|ENST00000610896|GFY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27734375	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.85981	1	8502	8502		35.152	1.2304	1	7438100			12108	288	8343	8351	13843	13843					0.06031992020314192
GLRSKAAPSA	10	Unmodified	_GLRSKAAPSA_					0	0	0		ENSG00000261949|ENST00000610896|GFY;chr19:49424009-49425453|25|22.4|0.0|21.1|+|ENST00000576655|GFY,GFY	ENSG00000261949|ENST00000610896|GFY	ENSG00000261949|ENST00000610896|GFY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2777404785156	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.66675	2	9884	9860;9884		46.457	0	1	5642300			12109	288	8343	8351	13844;13845	13845					0.06031992020314192
GLRSKAAPSA	10	Unmodified	_GLRSKAAPSA_					0	0	0		ENSG00000261949|ENST00000610896|GFY;chr19:49424009-49425453|25|22.4|0.0|21.1|+|ENST00000576655|GFY,GFY	ENSG00000261949|ENST00000610896|GFY	ENSG00000261949|ENST00000610896|GFY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27752685546875	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.63899	2	9917	9905;9917		47.96	5.0302	1	6350300			12110	288	8343	8351	13846;13847	13847					0.06031992020314192
GLRSRTIP	8	Unmodified	_GLRSRTIP_					0	0	0		ENST00000592811.5_1_19:45973189-45973720:+|nuORF	ENST00000592811.5_1_19:45973189-45973720:+|nuORF	ENST00000592811.5_1_19:45973189-45973720:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2745056152344	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.89043	1	11061	11061		35.618	3.6634	1	19085000			12111	14296	8344	8352	13848	13848					0.08152313228526964
GLRTRLAVPH	10	Unmodified	_GLRTRLAVPH_					0	0	0			REV__nc|ENSG00000267493|Q8TBR5|CIRBP-AS1	REV__nc|ENSG00000267493|Q8TBR5|CIRBP-AS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3406372070312	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.8651	1	11420	11420		25.574	0.12388	1	81463000	+		12112	30257	8345	8353	13849	13849					0.11267337965296065
GLRVMLQAVF	10	Unmodified	_GLRVMLQAVF_					0	0	0			REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3295288085938	2	567.328619	1132.64269	1.3743	0.0007797	1.0283	0.00058341	2.4027	0.0013631	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.8608	1	11201	11201		34.173	0.65696	1	6182600	+		12113	21422	8346	8354	13850	13850					0.08166941767581193
GLRVSHGSA	9	Unmodified	_GLRVSHGSA_					0	0	0			REV__nc|ENSG00000105287|Q9BZL6-2|PRKD2	REV__nc|ENSG00000105287|Q9BZL6-2|PRKD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2407531738281	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.6204	2	7607	7488;7607		45.972	6.7194	1	716910	+		12114	17523	8347	8355	13851;13852	13852					0.021228632977113193
GLRVSHGSA	9	Unmodified	_GLRVSHGSA_					0	0	0			REV__nc|ENSG00000105287|Q9BZL6-2|PRKD2	REV__nc|ENSG00000105287|Q9BZL6-2|PRKD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2407531738281	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.77696	2	8231	8231;8326		31.53	1.0262	1	1238700	+		12115	17523	8347	8355	13853;13854	13853					0.021228632977113193
GLRVSHGSA	9	Unmodified	_GLRVSHGSA_					0	0	0			REV__nc|ENSG00000105287|Q9BZL6-2|PRKD2	REV__nc|ENSG00000105287|Q9BZL6-2|PRKD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24078369140625	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.76764	3	7936	7724;7889;7936		34.173	7.3764	1	1094000	+		12116	17523	8347	8355	13855;13856;13857	13857					0.021228632977113193
GLRVSLLSSN	10	Unmodified	_GLRVSLLSSN_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3035278320312	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.86272	1	8713	8713		24.519	2.5593	1	13442000	+		12117	16368	8348	8356	13858	13858					0.07224530363305348
GLRVVREE	8	Unmodified	_GLRVVREE_					0	0	0			REV__ENSG00000117868|ENST00000275418|ESYT2	REV__ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27606201171875	2	479.277441	956.540328	-1.0476	-0.00050211	1.2406	0.00059461	0.193	9.2502E-05	479.27794521109934	87.608	3.0549	87.608	87.076	90.13	0					149	70	3	0	0	0	0.89679	1	8409	8409		37.812	8.662	1	645930	+		12118	18285	8349	8357	13859	13859					0.060319920203255606
GLRVVREE	8	Unmodified	_GLRVVREE_					0	0	0			REV__ENSG00000117868|ENST00000275418|ESYT2	REV__ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2777404785156	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.89962	1	8918	8918		38.806	1.647	1	7040000	+		12119	18285	8349	8357	13860	13860					0.060319920203255606
GLSALTNLR	9	Unmodified	_GLSALTNLR_					0	0	0			REV__nc|ENSG00000142002|Q86TI2-4|DPP9	REV__nc|ENSG00000142002|Q86TI2-4|DPP9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7799377441406	2	472.779816	943.545079	0.72453	0.00034254	-0.56577	-0.00026748	0.15877	7.5062E-05	472.7793610943385	23.239	0.46783	22.82	22.649	23.116	-0.41879					23	10	3	0	0	0	0.78058	1	1029	1029		30.504	0	1	170180	+		12120	19718	8350	8358	13861	13861					0.07104876163077734
GLSDKEQRF	9	Unmodified	_GLSDKEQRF_					0	0	0		ENSG00000151611|ENST00000649156|MMAA;ENST00000506919.1_1_4:146560261-146567442:+|nuORF	ENSG00000151611|ENST00000649156|MMAA	ENSG00000151611|ENST00000649156|MMAA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.2763061523438	2	540.277638	1078.54072	-0.34222	-0.00018489	0.39248	0.00021205	0.050262	2.7155E-05	540.2777097243849	20.362	0.71695	19.732	19.49	20.207	-0.6296					29	15	3	0	0	0	0.74721	1	653	653		37.159	5.6293	1	204890			12121	5128	8351	8359	13862	13862					0.004593669495079666
GLSFATRHSPL	11	Unmodified	_GLSFATRHSPL_					0	0	0			REV__ENSG00000158553|ENST00000444565|POM121L2	REV__ENSG00000158553|ENST00000444565|POM121L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.3223266601562	2	593.32238	1184.63021	0.77272	0.00045847	-1.7427	-0.001034	-0.96998	-0.00057551	593.321294730997	41.341	1.0593	41.346	41.006	42.066	0.0043983					55	29	2	0	0	0	0.55601	1	2734	2734		47.96	7.9014	1	2399500	+		12122	20612	8352	8360	13863	13863					0.04527621628903944
GLSFATRHSPL	11	Unmodified	_GLSFATRHSPL_					0	0	0			REV__ENSG00000158553|ENST00000444565|POM121L2	REV__ENSG00000158553|ENST00000444565|POM121L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3214721679688	2	593.32238	1184.63021	0.35222	0.00020898	-1.6201	-0.00096125	-1.2679	-0.00075227	593.3214955496583	41.16	1.5019	41.115	40.771	42.273	-0.045467					105	44	3	0	0	0	0.638	1	2706	2706		40.058	0.80534	1	2608700	+		12123	20612	8352	8360	13864	13864					0.04527621628903944
GLSGELYGWLD	11	Unmodified	_GLSGELYGWLD_					0	0	0			REV__ENST00000360943.9_1_17:47004499-47005111:+|nuORF	REV__ENST00000360943.9_1_17:47004499-47005111:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	605.2954711914062	2	605.292953	1208.57135	-0.42975	-0.00026013	0.77268	0.0004677	0.34293	0.00020757	605.2932765293708	84.87	0.96414	84.87	84.438	85.402	0					28	21	2	0	0	0	0.74771	1	8042	8042		13.454	0	1	119280	+		12124	25488	8353	8361	13865	13865					-0.02458899456087238
GLSISLRLTG	10	Unmodified	_GLSISLRLTG_					0	0	0		ENST00000600178.5_1_19:39307991-39322412:-|nuORF;ENST00000598707.5_1_19:39306922-39322412:-|nuORF;ENSG00000104823|ENST00000221418|ECH1	ENST00000600178.5_1_19:39307991-39322412:-|nuORF	ENST00000600178.5_1_19:39307991-39322412:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.8075256347656	2	508.808574	1015.60259	-0.85493	-0.00043499	-0.55163	-0.00028067	-1.4066	-0.00071567	508.8081854694424	90.498	1.1947	90.498	89.91	91.105	0					75	27	4	0	0	0	0.85981	1	8829	8829		35.152	4.8343	1	968460			12125	2150	8354	8362	13866	13866					0.09541718368654983
GLSISLRLTG	10	Unmodified	_GLSISLRLTG_					0	0	0		ENST00000600178.5_1_19:39307991-39322412:-|nuORF;ENST00000598707.5_1_19:39306922-39322412:-|nuORF;ENSG00000104823|ENST00000221418|ECH1	ENST00000600178.5_1_19:39307991-39322412:-|nuORF	ENST00000600178.5_1_19:39307991-39322412:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8055114746094	2	508.808574	1015.60259	-0.68521	-0.00034864	-0.65536	-0.00033345	-1.3406	-0.00068209	508.8081192090242	89.422	0.79648	89.892	89.476	90.273	0.47068					37	19	2	0	0	0	0.8545	1	10627	10627		36.447	0.82846	1	1252700			12126	2150	8354	8362	13867	13867					0.09541718368654983
GLSLTLTV	8	Unmodified	_GLSLTLTV_					0	0	0		ENST00000481948.1_1_16:88104968-88110264:+|nuORF	REV__ENSG00000065320|ENST00000173229|NTN1	REV__ENSG00000065320|ENST00000173229|NTN1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.2482604980469	2	402.247286	802.48002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.606	1	25.656	25.156	26.156	0.050451								0	0	0	0.29353	1	1027	1027		28.254	0	1				12127	16495	8355	8363	13868	13868					0.07087881637221471
GLSLVSYL	8	Unmodified	_GLSLVSYL_					0	0	0			REV__LTR8_dup2971|chr17:8380695-8381392:+|6.055160977625477|0.2447948664736123|4.63|63.0|36|1|anti-sense	REV__LTR8_dup2971|chr17:8380695-8381392:+|6.055160977625477|0.2447948664736123|4.63|63.0|36|1|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.24609375	2	426.247286	850.48002	0.61593	0.00026254	-3.4632	-0.0014762	-2.8473	-0.0012137	426.24572360202285	87.518	4.0945	87.668	85.602	89.696	0.14956					180	96	4	0	0	0	0.85277	1	8691	8691		25.45	0.94616	1	3688500	+		12128	29641	8356	8364	13869	13869					0.04879881637236849
GLSRLHGLS	9	Unmodified	_GLSRLHGLS_					0	0	0			REV__ENSG00000220008|ENST00000698372|LINGO3	REV__ENSG00000220008|ENST00000698372|LINGO3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.2717590332031	2	470.272158	938.529764	-1.7118	-0.000805	1.6827	0.00079131	-0.029114	-1.3691E-05	470.2729404281299	92.166	2.8676	92.352	91.202	94.069	0.18582					129	67	3	0	0	0	0.76255	1	9229	9229		35.618	0	1	1756700	+		12129	23704	8357	8365	13870	13870					0.05804009365908769
GLSRLRTRALV	11	Unmodified	_GLSRLRTRALV_					0	0	0		ENST00000439994.5_1_11:62370229-62370646:-|nuORF;ENST00000394776.8_1_11:62370113-62370661:-|nuORF	ENST00000439994.5_1_11:62370229-62370646:-|nuORF	ENST00000439994.5_1_11:62370229-62370646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.3923950195312	2	621.39367	1240.77279	2.1086	0.0013103	-3.2264	-0.0020048	-1.1178	-0.00069459	621.3915992412323	104.3	2.0291	104.48	104.04	106.07	0.18888					138	51	4	0	0	0	0.74763	1	12659	12659		22.58	1.6327	1	1168000			12130	11078	8358	8366	13871	13871					0.1620325409094221
GLSSANPALTY	11	Unmodified	_GLSSANPALTY_					0	0	0			REV__ENSG00000145248|ENST00000273861|SLC10A4	REV__ENSG00000145248|ENST00000273861|SLC10A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	547.2791748046875	2	547.279846	1092.54514	0.1543	8.4446E-05	-0.15148	-8.2901E-05	0.0028218	1.5443E-06	547.2795816099393	26.806	0.80088	26.847	26.577	27.378	0.040834					51	26	3	0	0	0	0.65746	1	1155	1155		37.812	0.65241	1	154920	+		12131	19935	8359	8367	13872	13872					0.002568313724395921
GLSSTKLGT	9	Unmodified	_GLSSTKLGT_					0	0	0		ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.2467956542969	2	432.245275	862.475997	1.6286	0.00070397	2.44	0.0010547	4.0686	0.0017586	432.24636827465696	97.973	1.4306	98.35	97.873	99.304	0.37679					103	34	5	0	0	0	0.67345	1	11799	11799		42.396	1.618	1	6519900			12132	5960	8360	8368	13873	13873					0.03925792143536455
GLTAFEAT	8	Unmodified	_GLTAFEAT_					0	0	0		ENSG00000105887|ENST00000393085|MTPN	ENSG00000105887|ENST00000393085|MTPN	ENSG00000105887|ENST00000393085|MTPN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.2032470703125	2	405.205618	808.396684	-0.0495	-2.0058E-05	-2.1856	-0.00088563	-2.2351	-0.00090569	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.87922	1	7748	7748		31.955	0	1	162370			12133	2262	8361	8369	13874	13874					-0.0151785481062916
GLTDVILYH	9	Unmodified	_GLTDVILYH_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000271793|O60506-5|SYNCRIP	nc|ENSG00000271793|O60506-4|SYNCRIP	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7817993164062	2	515.782025	1029.5495	0.55499	0.00028626	-0.48187	-0.00024854	0.073127	3.7718E-05	515.7816652816367	69.099	0.77536	69.483	69.1	69.875	0.38416					46	18	3	0	0	0	2.1802E-05	4	7619	7598;7607;7619;7633		153.88	34.664	1	1270600			12134	487	8362	8370	13875;13876;13877;13878	13877					0.035903405860153725
GLTDVILYH	9	Unmodified	_GLTDVILYH_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000271793|O60506-5|SYNCRIP	nc|ENSG00000271793|O60506-4|SYNCRIP	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.781982421875	2	515.782025	1029.5495	-0.13771	-7.1027E-05	0.080755	4.1652E-05	-0.056953	-2.9375E-05	515.7819139326881	69.045	0.87831	69.592	69.03	69.908	0.54694					47	20	3	0	0	0	1.8888E-20	4	7640	7618;7629;7640;7654		180.49	69.838	1	1437200			12135	487	8362	8370	13879;13880;13881;13882	13881					0.035903405860153725
GLTIHWGCALE	11	Unmodified	_GLTIHWGCALE_					0	0	0		ENSG00000110887|ENST00000228476|DAO	ENSG00000110887|ENST00000228476|DAO	ENSG00000110887|ENST00000228476|DAO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	600.3042602539062	2	600.297516	1198.58048	0.77368	0.00046444	2.2753	0.0013658	3.0489	0.0018303	600.2986860772538	28.441	0.69815	28.267	27.89	28.588	-0.17336					34	17	3	0	0	0	0.69995	1	1722	1722		31.53	3.6476	1	154220			12136	2548	8363	8371	13883	13883					-0.010868293714111132
GLTIKPLP	8	Unmodified	_GLTIKPLP_					0	0	0			REV__ENST00000591490.5_1_17:40821442-40821721:-|nuORF	REV__ENST00000591490.5_1_17:40821442-40821721:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.77490234375	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.90465	1	3221	3221		40.573	1.7665	1	10266000	+		12137	29196	8364	8372	13884	13884					0.10712464770847419
GLTKKNKAPSR	11	Unmodified	_GLTKKNKAPSR_					0	0	0			REV__ENSG00000130762|ENST00000378378|ARHGEF16	REV__ENSG00000130762|ENST00000378378|ARHGEF16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.9163818359375	3	400.578811	1198.7146	5.5421	0.00222	-0.69907	-0.00028003	4.843	0.00194	400.91304036236716	112.56	0.48872	112.6	112.44	112.93	0.032707					21	15	2	0	0	0	0.75457	1	13640	13640		21.032	6.3386	1	26399	+		12138	18903	8365	8373	13885	13885					0.12319572445630911
GLTLLLSVP	9	Unmodified	_GLTLLLSVP_					0	0	0			REV__ENST00000217381.2_1_20:31995804-31996281:-|nuORF	REV__ENST00000217381.2_1_20:31995804-31996281:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7921447753906	2	456.791861	911.569169	-0.051128	-2.3355E-05	1.9525	0.00089189	1.9014	0.00086853	456.79265367527273	40.074	1.5514	40.027	39.34	40.891	-0.04789					131	49	4	0	0	0	0.72402	1	2500	2500		38.806	3.1879	1	940180	+		12139	24140	8366	8374	13886	13886					0.10984716596749422
GLTLSFLS	8	Unmodified	_GLTLSFLS_					0	0	0			REV__ENST00000310771.8_1_7:99950889-99951396:+|nuORF	REV__ENST00000310771.8_1_7:99950889-99951396:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22760009765625	2	419.239461	836.46437	0.54233	0.00022737	-3.388	-0.0014204	-2.8457	-0.001193	419.23743239234784	79.469	0.33897	79.608	79.493	79.832	0.13883					14	13	2	0	0	0	0.4196	1	7568	7568		25.45	0	1	26328	+		12140	24895	8367	8375	13887	13887					0.03959595120193171
GLTLTATY	8	Unmodified	_GLTLTATY_					0	0	0			REV__nc|ENSG00000158882|Q969M1-2|TOMM40L	REV__nc|ENSG00000158882|Q969M1-2|TOMM40L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2279357910156	2	420.229094	838.443634	-0.18765	-7.8855E-05	-2.6467	-0.0011122	-2.8344	-0.0011911	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.884	1	7901	7901		33.516	6.7195	1	743780	+		12141	20629	8368	8376	13888	13888					0.017950047405292935
GLTLTATY	8	Unmodified	_GLTLTATY_					0	0	0			REV__nc|ENSG00000158882|Q969M1-2|TOMM40L	REV__nc|ENSG00000158882|Q969M1-2|TOMM40L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2266845703125	2	420.229094	838.443634	-1.4714	-0.00061832	-1.5274	-0.00064185	-2.9988	-0.0012602	420.22834377301643	76.819	2.0914	76.909	74.945	77.036	0.089363					112	66	2	0	0	0	0.884	1	7116	7116		33.516	1.5607	1	246920	+		12142	20629	8368	8376	13889	13889					0.017950047405292935
GLTPLPLL	8	Unmodified	_GLTPLPLL_					0	0	0			REV__ENST00000174618.4_1_17:2289655-2289982:-|nuORF	REV__ENST00000174618.4_1_17:2289655-2289982:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.23773193359375	2	412.268022	822.521491	-0.46554	-0.00019193	0.83105	0.00034261	0.36551	0.00015069	412.269427279529	74.5	0.46081	74.456	74.168	74.629	-0.043877					21	15	2	0	0	0	0.4196	1	7299	7299		8.8223	0	1	38376	+		12143	24081	8369	8377	13890	13890					0.10313062396585337
GLTPVDIK	8	Unmodified	_GLTPVDIK_					0	0	0			REV__ENSG00000125780|ENST00000381458|TGM3	REV__ENSG00000125780|ENST00000381458|TGM3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7518310546875	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.668	1	76.717	76.217	77.217	0.049194								0	0	0	0.29264	1	7413	7413		29.15	1.2673	1		+		12144	18668	8370	8378	13891	13891					0.06383284011519663
GLTVKVDAP	9	Unmodified	_GLTVKVDAP_					0	0	0		ENST00000506277.1_1_5:36885931-36886276:+|nuORF	ENST00000506277.1_1_5:36885931-36886276:+|nuORF	ENST00000506277.1_1_5:36885931-36886276:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2618713378906	2	450.263468	898.512382	-1.3168	-0.00059292	-1.4351	-0.00064616	-2.7519	-0.0012391	450.26266605332285	40.083	0.97701	40.672	40	40.977	0.58915					56	23	3	0	0	0	0.41566	1	3383	3383		56.721	7.2795	1	1196000			12145	12935	8371	8379	13892	13892					0.05906669040234647
GLTVPLTPLS	10	Unmodified	_GLTVPLTPLS_					0	0	0			REV__ENST00000324432.9_1_7:76099677-76109759:+|nuORF	REV__ENST00000324432.9_1_7:76099677-76109759:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	499.3092346191406	2	499.30005	996.585547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.031	1	33.029	32.529	33.529	-0.0016365								0	0	0	0.45132	1	1917	1917		21.96	4.5949	1		+		12146	25048	8372	8380	13893	13893					0.08711797762850892
GLTVPTSPK	9	Unmodified	_GLTVPTSPK_					0	0	0		nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.26092529296875	2	450.263468	898.512382	-2.4214	-0.0010903	-0.017002	-7.6553E-06	-2.4384	-0.0010979	450.2632943884122	40.207	1.0457	40.579	39.902	40.947	0.37184					60	26	3	0	0	0	0.18601	1	3406	3406		76.774	5.4784	1	1534500			12147	5073	8373	8381	13894	13894					0.059066690402460154
GLTVPTSPK	9	Unmodified	_GLTVPTSPK_					0	0	0		nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2630310058594	2	450.263468	898.512382	-1.3168	-0.00059292	-1.4351	-0.00064616	-2.7519	-0.0012391	450.26266605332285	40.083	0.97701	40.672	40	40.977	0.58915					56	23	3	0	0	0	0.18601	1	3395	3395		76.774	5.4784	1	1196000			12148	5073	8373	8381	13895	13895					0.059066690402460154
GLTVQRGLSA	10	Unmodified	_GLTVQRGLSA_					0	0	0			REV__ENST00000425013.6_1_7:5661541-5661721:-|nuORF	REV__ENST00000425013.6_1_7:5661541-5661721:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2901306152344	2	501.290548	1000.56654	-0.064942	-3.2555E-05	-0.21369	-0.00010712	-0.27863	-0.00013967	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.85981	1	8553	8553		35.152	0.97948	1	2854100	+		12149	26528	8374	8382	13896	13896					0.06628261191804086
GLTVVLLVMD	10	Unmodified	_GLTVVLLVMD_					0	0	0			REV__ENSG00000167191|ENST00000300571|GPRC5B	REV__ENSG00000167191|ENST00000300571|GPRC5B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2925415039062	2	530.309561	1058.60457	-0.066014	-3.5008E-05	3.5565	0.001886	3.4904	0.001851	530.3110778472558	92.232	1.2293	92.454	91.763	92.993	0.22157					37	28	2	0	0	0	0.37624	1	9242	9242		47.657	18.508	1	102220	+		12150	21364	8375	8383	13897	13897					0.07761011062279977
GLVDQEAAR	9	Unmodified	_GLVDQEAAR_					0	0	0			REV__chr14:76407596-76439341|16|17.94|0.9|4.32|+|0|ESRRB,ESRRB|1	REV__chr14:76407596-76439341|16|17.94|0.9|4.32|+|0|ESRRB,ESRRB|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.7518615722656	2	479.751256	957.487959	-1.1794	-0.00056582	1.0367	0.00049735	-0.14272	-6.8469E-05	479.7516678352157	31.194	0.81332	31.184	30.842	31.655	-0.010656					35	18	3	0	0	0	0.21969	1	1672	1672		71.877	0	1	189750	+		12151	15607	8376	8384	13898	13898					0.007514088867083046
GLVDSLNWF	9	Unmodified	_GLVDSLNWF_					0	0	0			REV__chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	REV__chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3600463867188	2	525.766374	1049.5182	1.4478	0.00076121	3.0661	0.0016121	4.5139	0.0023733	525.7681009997067	36.646	0.61888	37.086	36.786	37.405	0.44043					20	14	2	0	0	0	0.20789	1	2872	2872		38.806	3.1879	1	104480	+		12152	15759	8377	8385	13899	13899					-0.004582324480907118
GLVGGADRLAS	11	Unmodified	_GLVGGADRLAS_					0	0	0		ENST00000421816.6_1_19:13002183-13002660:+|nuORF	ENST00000421816.6_1_19:13002183-13002660:+|nuORF	ENST00000421816.6_1_19:13002183-13002660:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.27960205078125	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.59499	1	9368	9368		45.022	7.2107	1	1903500			12153	11471	8378	8386	13900	13900					0.03911670812124157
GLVGRSAGPGG	11	Unmodified	_GLVGRSAGPGG_					0	0	0			REV__ENSG00000135776|ENST00000344517|ABCB10	REV__ENSG00000135776|ENST00000344517|ABCB10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.25390625	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.61774	1	8062	8062		42.396	4.5846	1	1324500	+		12154	19250	8379	8387	13901	13901					0.027191324691898444
GLVGWAIGY	9	Unmodified	_GLVGWAIGY_					0	0	0			REV__ENST00000421816.6_1_19:13002118-13008243:+|nuORF	REV__ENST00000421816.6_1_19:13002118-13008243:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2552490234375	2	468.252903	934.491253	0.516	0.00024162	3.6072	0.0016891	4.1232	0.0019307	468.25439307684206	81.814	3.5851	81.751	80.618	84.204	-0.062943					157	83	2	0	0	0	0.78292	1	8380	8380		29.842	4.2675	1	180670	+		12155	17554	8380	8388	13902	13902					0.02138703731361602
GLVGWFFI	8	Unmodified	_GLVGWFFI_					0	0	0			REV__ENSG00000152207|ENST00000682523|CYSLTR2	REV__ENSG00000152207|ENST00000682523|CYSLTR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.7596435546875	2	469.760364	937.506175	0.13992	6.5729E-05	2.1355	0.0010032	2.2754	0.0010689	469.7613068625106	35.735	1.6772	35.674	35.283	36.96	-0.060337					67	47	2	0	0	0	0.84567	1	1972	1972		24.504	0.30126	1	144740	+		12156	20288	8381	8389	13903	13903					0.03492195599369552
GLVHCKNVKVI	11	Unmodified	_GLVHCKNVKVI_					0	0	0		ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9109191894531	3	403.909392	1208.70635	1.6372	0.00066129	0.29089	0.00011749	1.9281	0.00077879	403.90940390905183	68.69	2.5103	69.075	67.299	69.809	0.38482					145	63	3	0	0	0	0.69931	1	7457	7457		31.634	0	1	351280			12157	7555	8382	8390	13904	13904					0.11034302204689084
GLVIDQTK	8	Unmodified	_GLVIDQTK_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77197265625	2	437.255643	872.496732	-0.213	-9.3134E-05	0.80257	0.00035093	0.58957	0.00025779	437.255873769902	38.47	1.0116	38.993	38.357	39.369	0.52235					37	24	2	0	0	0	0.4196	1	3130	3130		27.882	0	1	128030	+		12158	17968	8383	8391	13905	13905					0.05538382523184282
GLVLALRK	8	Unmodified	_GLVLALRK_					0	0	0		nc|ENSG00000110697|O00562-2|PITPNM1;ENSG00000110697|ENST00000356404|PITPNM1;ENST00000527370.5_1_11:67264693-67266053:-|nuORF	nc|ENSG00000110697|O00562-2|PITPNM1;ENST00000527370.5_1_11:67264693-67266053:-|nuORF	nc|ENSG00000110697|O00562-2|PITPNM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3002624511719	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.81548	1	7029	7029		20.482	0	1	1702600			12159	2534;13285	8384	8392	13906	13906					0.14627262273359065
GLVLCLHP	8	Unmodified	_GLVLCLHP_					0	0	0		chr15:35220582-35328840|39|39.59|0.0|21.92|-|1|TE_info:THE1A,THE1A_dup3684,ERVL-MaLR,LTR,donor,-,35328840,35329126|DPH6,None|2	chr15:35220582-35328840|39|39.59|0.0|21.92|-|1|TE_info:THE1A,THE1A_dup3684,ERVL-MaLR,LTR,donor,-,35328840,35329126|DPH6,None|2	chr15:35220582-35328840|39|39.59|0.0|21.92|-|1|TE_info:THE1A,THE1A_dup3684,ERVL-MaLR,LTR,donor,-,35328840,35329126|DPH6,None|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.2467346191406	2	426.244024	850.473494	0.72577	0.00030935	3.9902	0.0017008	4.716	0.0020102	426.24560525358714	84.97	2.0876	84.898	83.54	85.628	-0.071953					93	47	2	0	0	0	0.88393	1	8689	8689		33.493	4.3434	1	390190			12160	184	8385	8393	13907	13907					0.04227665204859932
GLVLIIVLIK	10	Unmodified	_GLVLIIVLIK_					0	0	0			REV__ENSG00000167080|ENST00000393354|B4GALNT2	REV__ENSG00000167080|ENST00000393354|B4GALNT2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.3545532226562	2	540.891378	1079.7682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.89	1	116.82	116.32	117.32	-0.074745								0	0	0	0.45132	1	12545	12545		10.866	7.1812	1		+		12161	21350	8386	8394	13908	13908					0.23150976895431086
GLVLPAVLG	9	Unmodified	_GLVLPAVLG_					0	0	0		ENSG00000106991|ENST00000373203|ENG;nc|ENSG00000106991|P17813-2|ENG	ENSG00000106991|ENST00000373203|ENG	ENSG00000106991|ENST00000373203|ENG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7748107910156	2	419.773471	837.53239	0.29636	0.0001244	3.1717	0.0013314	3.4681	0.0014558	419.77476468640464	52.151	1.1529	52.21	51.751	52.904	0.059719					66	36	3	0	0	0	0.7932	1	4214	4214		21.702	0	1	170490			12162	2326	8387	8395	13909	13909					0.10712464770858787
GLVLRGEPG	9	Unmodified	_GLVLRGEPG_					0	0	0		ENST00000543571.5_1_6:150023374-150039241:-|nuORF	ENST00000543571.5_1_6:150023374-150039241:-|nuORF	ENST00000543571.5_1_6:150023374-150039241:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2607421875	2	449.261259	896.507966	-0.13632	-6.1244E-05	-1.331	-0.00059798	-1.4674	-0.00065923	449.26055039529075	68.162	1.4065	68.547	67.946	69.352	0.38483					66	33	3	0	0	0	0.78058	1	7526	7526		30.504	1.3541	1	1822600			12163	13554	8388	8396	13910	13910					0.05557204617332445
GLVLVTTLVWH	11	Unmodified	_GLVLVTTLVWH_					0	0	0		nc|ENSG00000110786|P54829-2|PTPN5;nc|ENSG00000110786|P54829-3|PTPN5;ENSG00000110786|ENST00000358540|PTPN5	nc|ENSG00000110786|P54829-2|PTPN5	nc|ENSG00000110786|P54829-2|PTPN5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.3709106445312	2	619.368798	1236.72304	1.27	0.0007866	3.6702	0.0022732	4.9402	0.0030598	619.3710394706492	101.41	0.94493	101.61	101.32	102.26	0.2058					77	22	4	0	0	0	0.75495	1	10622	10622		20.947	0.10978	1	2074300			12164	2542	8389	8397	13911	13911					0.11415126362271621
GLVMKVNL	8	Unmodified	_GLVMKVNL_					0	0	0		ENST00000400075.3_1_21:27136953-27137013:+|nuORF	ENST00000400075.3_1_21:27136953-27137013:+|nuORF	ENST00000400075.3_1_21:27136953-27137013:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.265380859375	2	437.264956	872.515359	-0.37471	-0.00016385	2.1781	0.00095241	1.8034	0.00078857	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.86288	1	806	806		26.796	0.10319	1	970200			12165	11219	8390	8398	13912	13912					0.0740022089340755
GLVMKVNL	8	Unmodified	_GLVMKVNL_					0	0	0		ENST00000400075.3_1_21:27136953-27137013:+|nuORF	ENST00000400075.3_1_21:27136953-27137013:+|nuORF	ENST00000400075.3_1_21:27136953-27137013:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2659606933594	2	437.264956	872.515359	0.03062	1.3389E-05	1.7544	0.00076715	1.7851	0.00078054	437.2656144717129	22.266	1.1262	22.354	22.073	23.199	0.088013					130	57	3	0	0	0	0.82464	1	682	682		21.702	0	1	2198600			12166	11219	8390	8398	13913	13913					0.0740022089340755
GLVPGEHQ	8	Unmodified	_GLVPGEHQ_					0	0	0		ENSG00000116183|ENST00000367662|PAPPA2	ENSG00000116183|ENST00000367662|PAPPA2	ENSG00000116183|ENST00000367662|PAPPA2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.7171936035156	2	418.716685	835.418816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.219	1	61.772	61.272	62.272	0.55386								0	0	0	0.29353	1	6539	6539		28.254	1.4582	1				12167	2906	8391	8399	13914	13914					-0.005476303421914963
GLVPGLAGSY	10	Unmodified	_GLVPGLAGSY_					0	0	0		ENSG00000180182|ENST00000324817|MED14	ENSG00000180182|ENST00000324817|MED14	ENSG00000180182|ENST00000324817|MED14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2476806640625	2	467.255643	932.496732	-1.1127	-0.00051992	1.1862	0.00055428	0.073533	3.4359E-05	467.25587537621453	61.684	0.78294	62.073	61.708	62.491	0.38846					38	17	3	0	0	0	0.5766	1	6594	6594		51.335	0	1	166160			12168	7316	8392	8400	13915	13915					0.02778382523183609
GLVRNFLI	8	Unmodified	_GLVRNFLI_					0	0	0			REV__ENSG00000116711|ENST00000367466|PLA2G4A	REV__ENSG00000116711|ENST00000367466|PLA2G4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2899169921875	2	466.28982	930.565087	-0.64111	-0.00029894	0.64441	0.00030048	0.0033003	1.5389E-06	466.28999408550436	73.948	1.2575	73.992	73.721	74.978	0.043648					98	48	3	0	0	0	0.89457	1	7195	7195		37.028	1.4102	1	991630	+		12169	18217	8393	8401	13916	13916					0.09702671893705883
GLVRNFLI	8	Unmodified	_GLVRNFLI_					0	0	0			REV__ENSG00000116711|ENST00000367466|PLA2G4A	REV__ENSG00000116711|ENST00000367466|PLA2G4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.2903137207031	2	466.28982	930.565087	0.52735	0.0002459	-0.45222	-0.00021086	0.075133	3.5034E-05	466.28951494352106	73.831	0.94804	73.962	73.721	74.669	0.13127					82	37	3	0	0	0	0.91005	1	6851	6851		42.474	8.9589	1	894650	+		12170	18217	8393	8401	13917	13917					0.09702671893705883
GLVSLNQT	8	Unmodified	_GLVSLNQT_					0	0	0			REV__ENST00000481791.1_1_2:55771313-55772141:+|nuORF	REV__ENST00000481791.1_1_2:55771313-55772141:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.80902099609375	2	416.232168	830.449782	0.14404	5.9952E-05	1.374	0.0005719	1.518	0.00063185	416.23278276869127	19.6	0.7776	18.97	18.666	19.443	-0.6296					24	16	2	0	0	0	0.4196	1	542	542		18.324	0	1	90148	+		12171	27450	8394	8402	13918	13918					0.02777522972053248
GLVSPVEHPQ	10	Unmodified	_GLVSPVEHPQ_					0	0	0			REV__ENSG00000136274|ENST00000490531|NACAD	REV__ENSG00000136274|ENST00000490531|NACAD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7822875976562	2	531.782556	1061.55056	0.46378	0.00024663	-1.044	-0.00055518	-0.58021	-0.00030855	531.7820031077274	29.432	2.4582	29.343	28.288	30.746	-0.089544					170	57	5	0	0	0	0.37206	1	1903	1903		66.429	2.222	1	12586000	+		12172	19303	8395	8403	13919	13919					0.022245549549097632
GLVYPGRNL	9	Unmodified	_GLVYPGRNL_					0	0	0			REV__nc|ENSG00000149782|Q01970-2|PLCB3	REV__nc|ENSG00000149782|Q01970-2|PLCB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7803039550781	2	494.782359	987.550165	-0.85772	-0.00042438	-3.1278	-0.0015476	-3.9855	-0.001972	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.58151	1	8793	8793		47.916	3.7988	1	737700	+		12173	20194	8396	8404	13920	13920					0.05589180025708629
GLWLLLCS	8	Unmodified	_GLWLLLCS_					0	0	0		ENSG00000116005|ENST00000433351|PCYOX1	ENSG00000116005|ENST00000433351|PCYOX1	ENSG00000116005|ENST00000433351|PCYOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.88201904296875	2	452.751682	903.48881	0.94466	0.0004277	-2.8629	-0.0012962	-1.9183	-0.00086849	452.749094508698	16.928	0.10454	16.846	16.793	16.897	-0.0821					5	4	2	0	0	0	0.86791	1	183	183		28.254	2.8041	1	8640			12174	2892	8397	8405	13921	13921					0.03320532002055643
GLWQHGIS	8	Unmodified	_GLWQHGIS_					0	0	0		ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2333679199219	2	449.232502	896.450451	-1.619	-0.00072729	-2.5262	-0.0011349	-4.1452	-0.0018622	449.23133844286133	83.319	3.7519	83.457	82.118	85.87	0.13811					166	86	3	0	0	0	0.884	1	7976	7976		33.516	4.366	1	160270			12175	7970	8398	8406	13922	13922					-0.0019163758823879107
GLYEFFRAK	9	Unmodified	_GLYEFFRAK_					0	0	0		ENSG00000085872|ENST00000546361|CHERP	ENSG00000085872|ENST00000546361|CHERP	ENSG00000085872|ENST00000546361|CHERP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.8033447265625	2	565.803291	1129.59203	0.42997	0.00024328	-0.43822	-0.00024795	-0.0082452	-4.6651E-06	565.8029659982216	55.729	1.1064	56.13	55.323	56.429	0.40101					58	26	4	0	0	0	0.18338	2	5729	5729;5742		77.318	14.557	1	2562400			12176	1545	8399	8407	13923;13924	13923					0.032417357142321634
GLYEFFRAK	9	Unmodified	_GLYEFFRAK_					0	0	0		ENSG00000085872|ENST00000546361|CHERP	ENSG00000085872|ENST00000546361|CHERP	ENSG00000085872|ENST00000546361|CHERP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.802734375	2	565.803291	1129.59203	0.97156	0.00054971	-0.84747	-0.0004795	0.12409	7.0212E-05	565.8026974133318	55.491	0.70451	56.059	55.7	56.404	0.56836					49	16	4	0	0	0	0.11055	3	5712	5701;5712;5724		90.37	26.379	1	2559400			12177	1545	8399	8407	13925;13926;13927	13926					0.032417357142321634
GMEDGSDDMD	10	Unmodified	_GMEDGSDDMD_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34;ENST00000463046.5_1_2:61439047-61463244:-|nuORF	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.163818359375	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.764	1	57.735	57.235	58.235	-0.029865								0	0	0	0.45132	1	5342	5342		21.96	3.6355	1				12178	2846	8400	8408	13928	13928					-0.21549077329086685
GMEDGSDDMD	10	Unmodified	_GMEDGSDDMD_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34;ENST00000463046.5_1_2:61439047-61463244:-|nuORF	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.166259765625	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.555	1	77.646	77.146	78.146	0.091438								0	0	0	0.45132	1	7251	7251		20.947	0.95016	1				12179	2846	8400	8408	13929	13929					-0.21549077329086685
GMERGPTR	8	Unmodified	_GMERGPTR_					0	0	0			REV__nc|ENSG00000082438|Q53SF7-2|COBLL1	REV__nc|ENSG00000082438|Q53SF7-2|COBLL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2286071777344	2	452.226894	902.439234	1.1697	0.00052896	1.3567	0.00061353	2.5264	0.0011425	452.22766943283847	107.06	0.98818	107.17	106.77	107.76	0.10396					98	37	5	0	0	0	0.88601	1	13036	13036		34.173	0.65696	1	2682300	+		12180	29716	8401	8409	13930	13930					-0.015887829540247367
GMERGPTR	8	Unmodified	_GMERGPTR_					0	0	0			REV__nc|ENSG00000082438|Q53SF7-2|COBLL1	REV__nc|ENSG00000082438|Q53SF7-2|COBLL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.22845458984375	2	452.226894	902.439234	4.5147	0.0020417	-3.5157	-0.0015899	0.99901	0.00045178	452.2261030001731	107	0.85062	107.15	106.81	107.66	0.14929					69	29	5	0	0	0	0.90089	2	13071	13071;13083		42.396	3.1433	1	2327200	+		12181	29716	8401	8409	13931;13932	13931					-0.015887829540247367
GMGGIRDLL	9	Unmodified	_GMGGIRDLL_					0	0	0		ENST00000493076.5_1_22:35806581-35817581:+|nuORF	ENST00000493076.5_1_22:35806581-35817581:+|nuORF	ENST00000493076.5_1_22:35806581-35817581:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2534484863281	2	466.25512	930.495686	-0.068934	-3.2141E-05	-2.0741	-0.00096706	-2.143	-0.0009992	466.25405568860674	62.979	1.1346	62.945	62.242	63.376	-0.033714					88	53	2	0	0	0	0.76764	1	5959	5959		34.173	2.2177	1	153380			12182	12716	8402	8410	13933	13933					0.027658448826400672
GMGYPLIPG	9	Unmodified	_GMGYPLIPG_					0	0	0		ENSG00000168916|ENST00000513986|ZNF608;ENST00000513985.5_1_5:123974515-123980024:-|nuORF;nc|ENSG00000168916|Q9ULD9-2|ZNF608	ENSG00000168916|ENST00000513986|ZNF608	ENSG00000168916|ENST00000513986|ZNF608	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.7693176269531	2	452.733489	903.452425	0.26048	0.00011793	3.1392	0.0014212	3.3997	0.0015391	452.7343693899186	29.62	0.12819	29.651	29.581	29.709	0.030947					5	3	2	0	0	0	0.20789	1	1482	1482		21.702	7.0382	1	10796			12183	6449	8403	8411	13934	13934					-0.003163448946338576
GMKGQRHVNS	10	Unmodified	_GMKGQRHVNS_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|30|1|sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|30|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.2862548828125	2	557.282731	1112.55091	2.2125	0.001233	-0.91959	-0.00051247	1.2929	0.00072054	557.2823714854183	107.75	0.24963	107.85	107.65	107.9	0.10396					13	9	3	0	0	0	0.86106	1	13137	13137		33.922	3.6039	1	383700	+		12184	29445	8404	8412	13935	13935					-0.0008634859689209406
GMKGQRHVNS	10	Unmodified	_GMKGQRHVNS_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|30|1|sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|30|1|sense	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	557.282731	1112.55091	2.2125	0.001233	-0.91959	-0.00051247	1.2929	0.00072054	557.2823714854183	107.75	0.24963	107.85	107.65	107.9	0.10396	-0.0071581	0.001059	NaN	33.922	13	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	383700	+		12185	29445	8404	8412							-0.0008634859689209406
GMKGQRHVNS	10	Unmodified	_GMKGQRHVNS_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|30|1|sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|30|1|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	557.282731	1112.55091	4.6707	0.0026029	-2.9997	-0.0016717	1.671	0.00093123	557.2813559604992	107.75	0.15172	107.87	107.76	107.91	0.11715	0.0071581	-0.0012594	NaN	33.922	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	301070	+		12186	29445	8404	8412							-0.0008634859689209406
GMLIPFYG	8	Unmodified	_GMLIPFYG_					0	0	0			REV__L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|15|2|sense	REV__L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|15|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2320251464844	2	449.230582	896.446611	-1.2863	-0.00057784	1.2985	0.00058334	0.012238	5.4976E-06	449.2311264032564	83.242	4.4752	83.407	81.466	85.941	0.1651					199	104	3	0	0	0	0.88393	1	8103	8103		33.493	0.68056	1	231800	+		12187	29539	8405	8413	13936	13936					-0.005754434063078406
GMLKVKRR	8	Unmodified	_GMLKVKRR_					0	0	0			REV__nc|ENSG00000182973|Q9H9A5-6|CNOT10	REV__nc|ENSG00000182973|Q9H9A5-6|CNOT10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.30059814453125	2	494.315846	986.617139	2.3688	0.0011709	0.69255	0.00034234	3.0614	0.0015133	494.31547968805756	97.957	0.64727	97.901	97.729	98.377	-0.055542					21	14	2	0	0	0	0.4196	1	10558	10558		24.203	10.427	1	55059	+		12188	30083	8406	8414	13937	13937					0.12329512035819334
GMLLFLGR	8	Unmodified	_GMLLFLGR_					0	0	0		ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.76593017578125	2	453.765123	905.515694	0.25664	0.00011645	1.276	0.00057901	1.5326	0.00069546	453.7655790571442	42.641	1.9691	42.612	42.161	44.13	-0.029461					74	47	2	0	0	0	0.86288	1	3193	3193		26.796	2.5934	1	288700			12189	4415	8407	8415	13938	13938					0.0591564061326153
GMLLFLGR	8	Unmodified	_GMLLFLGR_					0	0	0		ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.7662048339844	2	453.765123	905.515694	-1.2902	-0.00058543	1.9617	0.00089015	0.67153	0.00030472	453.76607829009424	41.177	0.83587	41.181	40.825	41.661	0.0043983					78	27	4	0	0	0	0.86288	2	2712	2691;2712		44.531	7.5026	1	657720			12190	4415	8407	8415	13939;13940	13940					0.0591564061326153
GMLLFLGR	8	Unmodified	_GMLLFLGR_					0	0	0		ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.7659606933594	2	453.765123	905.515694	0.22799	0.00010345	1.49	0.00067612	1.718	0.00077957	453.76577882768925	41.923	1.745	41.996	41.584	43.329	0.073414					97	46	4	0	0	0	0.81548	2	2822	2763;2822		37.028	1.8278	1	672610			12191	4415	8407	8415	13941;13942	13942					0.0591564061326153
GMLLFLGR	8	Unmodified	_GMLLFLGR_					0	0	0		ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7657470703125	2	453.765123	905.515694	-0.080965	-3.6739E-05	2.3526	0.0010675	2.2717	0.0010308	453.76626844051486	71.556	0.82278	72.106	71.742	72.565	0.55009					66	19	5	0	0	0	0.92176	1	8026	8026		46.766	4.292	1	758660			12192	4415	8407	8415	13943	13943					0.0591564061326153
GMLLGDTIIL	10	Unmodified	_GMLLGDTIIL_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.301736	1044.58892	1.0264	0.00053713	2.344	0.0012266	3.3704	0.0017638	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.8608	1	8868	8868		34.173	5.023	1	3817300			12193	1951	8408	8416	13944	13944					0.06840724545213561
GMLVEVPK	8	Unmodified	_GMLVEVPK_					0	0	0			REV__ENST00000527664.1_1_8:110592124-110692982:-|nuORF	REV__ENST00000527664.1_1_8:110592124-110692982:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26531982421875	2	436.749139	871.483725	0.26883	0.00011741	3.6085	0.001576	3.8773	0.0016934	436.7503388936594	24.467	0.22542	24.138	23.936	24.161	-0.32825					6	4	2	0	0	0	0.4196	1	1175	1175		38.806	16.846	1	17531	+		12194	28232	8409	8417	13945	13945					0.042842281394541715
GMMAISSQGQY	11	2 Oxidation (M)	_GM(Oxidation (M))M(Oxidation (M))AISSQGQY_		GM(1)M(1)AISSQGQY		GM(70)M(70)AISSQGQY	0	0	2			REV__nc|ENSG00000184402|O75177-4|SS18L1	REV__nc|ENSG00000184402|O75177-4|SS18L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	602.7515258789062	2	602.752281	1203.49001	0.54367	0.0003277	-2.3151	-0.0013954	-1.7714	-0.0010677	602.7506795861692	85.799	0.66453	86.243	85.906	86.571	0.44331					48	15	4	0	0	0	0.32318	1	10037	10037		69.628	18.292	1	587850	+		12195	22673	8410	8418	13946	13946		343;344			-0.10359666481986096
GMMAISSQGQY	11	2 Oxidation (M)	_GM(Oxidation (M))M(Oxidation (M))AISSQGQY_					0	0	2			REV__nc|ENSG00000184402|O75177-4|SS18L1	REV__nc|ENSG00000184402|O75177-4|SS18L1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	602.752281	1203.49001	0.54367	0.0003277	-2.3151	-0.0013954	-1.7714	-0.0010677	602.7506795861692	85.799	0.66453	86.243	85.906	86.571	0.44331	-0.013682	-0.00049962	NaN	69.628	48	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	587850	+		12196	22673	8410	8418				343;344			-0.10359666481986096
GMMAISSQGQY	11	2 Oxidation (M)	_GM(Oxidation (M))M(Oxidation (M))AISSQGQY_					0	0	2			REV__nc|ENSG00000184402|O75177-4|SS18L1	REV__nc|ENSG00000184402|O75177-4|SS18L1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	602.752281	1203.49001	-0.52164	-0.00031442	-1.1856	-0.0007146	-1.7072	-0.001029	602.7513331903606	85.823	0.70346	86.27	85.945	86.648	0.44736	0.013682	0.00086205	NaN	69.628	40	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	605660	+		12197	22673	8410	8418				343;344			-0.10359666481986096
GMPGVGPVPL	10	Unmodified	_GMPGVGPVPL_					0	0	0		ENSG00000177613|ENST00000331173|CSTF2T	ENSG00000177613|ENST00000331173|CSTF2T	ENSG00000177613|ENST00000331173|CSTF2T	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	462.25537109375	2	462.254588	922.494624	0.31476	0.0001455	2.1847	0.0010099	2.4995	0.0011554	462.2554437313544	50.747	0.65531	50.797	50.487	51.142	0.049896					38	22	2	0	0	0	0.86786	1	4011	4011		26.796	0	1	260120			12198	7151	8411	8419	13947	13947					0.030276305137363124
GMPKGMTVI	9	Unmodified	_GMPKGMTVI_					0	0	0			REV__nc|ENSG00000164089|Q8TBG4-3|ETNPPL	REV__nc|ENSG00000164089|Q8TBG4-3|ETNPPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2492370605469	2	467.248449	932.482345	-0.67201	-0.000314	-0.25796	-0.00012053	-0.92997	-0.00043453	467.2481870447073	64.176	0.81422	64.563	64.178	64.992	0.3868					42	18	3	0	0	0	0.35373	1	6934	6934		60.972	8.0352	1	277190	+		12199	21030	8412	8420	13948	13948					0.013402707790191926
GMRGSEGCAY	10	Unmodified	_GMRGSEGCAY_					0	0	0		ENSG00000110852|ENST00000228438|CLEC2B	ENSG00000110852|ENST00000228438|CLEC2B	ENSG00000110852|ENST00000228438|CLEC2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	515.709228515625	2	515.707676	1029.4008	0.33636	0.00017346	2.7072	0.0013961	3.0436	0.0015696	515.7089237116219	29.849	0.9094	29.874	29.538	30.447	0.025013					58	23	4	0	0	0	0.46422	2	1498	1498;1522		58.782	5.3996	1	300030			12200	2546	8413	8421	13949;13950	13949					-0.11272456650863205
GMRGSEGCAY	10	Unmodified	_GMRGSEGCAY_					0	0	0		ENSG00000110852|ENST00000228438|CLEC2B	ENSG00000110852|ENST00000228438|CLEC2B	ENSG00000110852|ENST00000228438|CLEC2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.7089233398438	2	515.707676	1029.4008	0.035209	1.8157E-05	3.0489	0.0015723	3.0841	0.0015905	515.7091283131688	29.984	0.87046	29.941	29.555	30.426	-0.043095					44	19	3	0	0	0	0.80179	1	1617	1617		39.253	0.44669	1	395650			12201	2546	8413	8421	13951	13951					-0.11272456650863205
GMRLFKKLAS	10	Unmodified	_GMRLFKKLAS_					0	0	0			REV__ENST00000367495.3_1_6:146875744-146875882:+|nuORF	REV__ENST00000367495.3_1_6:146875744-146875882:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8424682617188	2	575.841894	1149.66923	1.9391	0.0011166	-0.2647	-0.00015242	1.6745	0.00096422	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.86718	1	9846	9846		27.882	2.4321	1	5986700	+		12202	25564	8414	8422	13952	13952					0.10038630658914371
GMSATSFH	8	Unmodified	_GMSATSFH_					0	0	0			REV__ENSG00000054523|ENST00000676179|KIF1B	REV__ENSG00000054523|ENST00000676179|KIF1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.18487548828125	2	419.18162	836.348688	2.1215	0.00088931	2.5221	0.0010572	4.6437	0.0019465	419.18264095568793	100	1.9591	100.35	99.506	101.46	0.34591					92	48	2	0	0	0	0.88915	1	12194	12194		35.201	0	1	9424600	+		12203	16402	8415	8423	13953	13953					-0.0760325200232046
GMSHQHFH	8	Unmodified	_GMSHQHFH_					0	0	0			REV__ENST00000315150.9_1_3:128809193-128809469:-|nuORF	REV__ENST00000315150.9_1_3:128809193-128809469:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.7137451171875	2	490.711411	979.408268	0.46701	0.00022917	3.6372	0.0017848	4.1042	0.002014	490.7133417262937	95.947	1.8864	96.351	95.769	97.655	0.40451					153	45	6	0	0	0	0.91977	1	11527	11527		45.952	3.4775	1	6523800	+		12204	24942	8416	8424	13954	13954					-0.08225936268274836
GMSSDPLH	8	Unmodified	_GMSSDPLH_					0	0	0			REV__ENSG00000133812|ENST00000256190|SBF2	REV__ENSG00000133812|ENST00000256190|SBF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.18914794921875	2	422.186903	842.359253	2.1776	0.00091935	1.1695	0.00049376	3.3471	0.0014131	422.1878859259197	104.59	0.97499	104.78	104.15	105.13	0.18888					78	24	4	0	0	0	0.91005	1	12776	12776		42.474	0	1	2830900	+		12205	19097	8417	8425	13955	13955					-0.06823269347876249
GMSSDPLH	8	Unmodified	_GMSSDPLH_					0	0	0			REV__ENSG00000133812|ENST00000256190|SBF2	REV__ENSG00000133812|ENST00000256190|SBF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.1888427734375	2	422.186903	842.359253	2.2164	0.00093575	1.5889	0.0006708	3.8053	0.0016065	422.18787253857664	105.23	1.5658	105.39	105.1	106.66	0.15583					118	51	5	0	0	0	0.93529	1	12830	12830		52.299	2.2746	1	2294800	+		12206	19097	8417	8425	13956	13956					-0.06823269347876249
GMSSDPLH	8	Unmodified	_GMSSDPLH_					0	0	0			REV__ENSG00000133812|ENST00000256190|SBF2	REV__ENSG00000133812|ENST00000256190|SBF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.18865966796875	2	422.186903	842.359253	4.0203	0.0016973	0.68557	0.00028944	4.7059	0.0019868	422.18713437938374	105.17	1.5784	105.4	105.12	106.7	0.22681					80	51	2	0	0	0	0.9159	1	12884	12884		44.531	0	1	2737200	+		12207	19097	8417	8425	13957	13957					-0.06823269347876249
GMVVLESA	8	Unmodified	_GMVVLESA_					0	0	0			REV__ENST00000475306.1_1_1:24410803-24434643:-|nuORF	REV__ENST00000475306.1_1_1:24410803-24434643:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2090148925781	2	403.209847	804.40514	-0.18721	-7.5483E-05	-1.9947	-0.00080429	-2.1819	-0.00087978	403.20895430476565	85.948	2.3712	86.015	85.029	87.4	0.067268					117	54	4	0	0	0	0.86288	1	8645	8645		26.796	1.3459	1	1482400	+		12208	27316	8418	8426	13958	13958					-0.004886241656436141
GMVVVPVIS	9	Unmodified	_GMVVVPVIS_					0	0	0		AluSq_dup8757|chr9:63818918-63819225:+|1.0047830359722725|0.3783450592878827|1.41|63.0|7|2|sense	AluSq_dup8757|chr9:63818918-63819225:+|1.0047830359722725|0.3783450592878827|1.41|63.0|7|2|sense	AluSq_dup8757|chr9:63818918-63819225:+|1.0047830359722725|0.3783450592878827|1.41|63.0|7|2|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2743835449219	2	450.764789	899.515025	-1.2446	-0.00056102	-2.9874	-0.0013466	-4.232	-0.0019076	450.7633111791325	93.044	0.37326	93.269	93.196	93.569	0.22548					12	8	2	0	0	0	0.20789	1	9484	9484		7.1934	0	1	202650			12209	7	8419	8427	13959	13959					0.06124801173552896
GNAHACSKGT	10	Unmodified	_GNAHACSKGT_					0	0	0		nc|ENSG00000087237|P11597-2|CETP;ENSG00000087237|ENST00000200676|CETP	nc|ENSG00000087237|P11597-2|CETP	nc|ENSG00000087237|P11597-2|CETP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.2156677246094	2	473.213983	944.413413	-0.50602	-0.00023946	0.74798	0.00035395	0.24196	0.0001145	473.2139753868401	48.782	0.47343	49.242	48.985	49.459	0.45983					25	11	3	0	0	0	0.86587	1	4737	4737		29.17	3.7199	1	511780			12210	1572	8420	8428	13960	13960					-0.06101677196318178
GNALAVEH	8	Unmodified	_GNALAVEH_					0	0	0			REV__ENSG00000129204|ENST00000574788|USP6;REV__ENSG00000170832|ENST00000300896|USP32	REV__ENSG00000170832|ENST00000300896|USP32	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.248046875	2	405.70886	809.403166	1.9265	0.00078158	-2.7318	-0.0011083	-0.80539	-0.00032675	405.70762151863545	89.286	0.66501	89.736	89.448	90.113	0.45058					27	15	2	0	0	0	0.4196	1	10521	10521		47.916	33.051	1	400530	+		12211	21690;18810	8421	8429	13961	13961					-0.00915916859241861
GNCELRGQV	9	Unmodified	_GNCELRGQV_					0	0	0			REV__nc|ENSG00000169087|Q96EW2-2|HSPBAP1	REV__nc|ENSG00000169087|Q96EW2-2|HSPBAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	488.23858642578125	2	488.237458	974.460364	-0.74489	-0.00036368	3.0991	0.0015131	2.3542	0.0011494	488.2389720091914	60.599	0.73972	60.7	60.395	61.135	0.10082					93	32	4	0	0	0	0.71772	1	5252	5252		39.253	5.3312	1	1383100	+		12212	27163	8422	8430	13962	13962					-0.027888176451710933
GNDEPDYTQF	10	Unmodified	_GNDEPDYTQF_					0	0	0			REV__ENSG00000148481|ENST00000277632|MINDY3	REV__ENSG00000148481|ENST00000277632|MINDY3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.157470703125	2	593.238375	1184.4622	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.857	1	18.834	18.334	19.334	-0.023342								0	0	0	0.45132	1	375	375		27.047	4.4677	1		+		12213	20118	8423	8431	13963	13963					-0.12265530146237325
GNDKKRIN	8	Unmodified	_GNDKKRIN_					0	0	0			REV__ENSG00000111581|ENST00000229179|NUP107	REV__ENSG00000111581|ENST00000229179|NUP107	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.76678466796875	2	472.76724	943.519927	0.62555	0.00029574	-0.6042	-0.00028565	0.02135	1.0094E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.87479	2	8087	8087;8099		37.812	3.7075	1	508030	+		12214	17875	8424	8432	13964;13965	13964					0.04590821360523023
GNECLLGH	8	Unmodified	_GNECLLGH_					0	0	0		ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF	ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2999572753906	2	421.694895	841.375237	-0.86451	-0.00036456	3.818	0.0016101	2.9535	0.0012455	421.6965004252969	87.772	0.49829	88.235	88.018	88.517	0.46312					16	11	2	0	0	0	0.4196	1	10374	10374		40.573	12.318	1	142310			12215	4219	8425	8433	13966	13966					-0.0517956311097123
GNEGPSGPPGP	11	Unmodified	_GNEGPSGPPGP_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.21832275390625	2	483.219788	964.425024	-0.8181	-0.00039532	-2.6918	-0.0013007	-3.5099	-0.001696	483.2184777480196	93.018	1.1303	93.468	92.947	94.077	0.44988					78	26	4	0	0	0	0.60058	1	11118	11118		44.377	5.1244	1	697510			12216	8425	8426	8434	13967	13967					-0.058611569013237386
GNFDMARTPLK	11	Unmodified	_GNFDMARTPLK_					0	0	0			REV__ENSG00000142798|ENST00000374695|HSPG2	REV__ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.3212280273438	2	625.321522	1248.62849	-0.61694	-0.00038578	-1.6629	-0.0010399	-2.2799	-0.0014257	625.3204345211741	64.692	1.0387	64.692	64.408	65.447	0					102	48	3	0	0	0	0.6493	1	5727	5727		38.754	0.94209	1	308710	+		12217	19756	8427	8435	13968	13968					0.014122445486236757
GNFGQLVSD	9	Unmodified	_GNFGQLVSD_					0	0	0			REV__ENSG00000101350|ENST00000375712|KIF3B	REV__ENSG00000101350|ENST00000375712|KIF3B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7231750488281	2	468.724707	935.43486	-1.2296	-0.00057635	-1.9244	-0.000902	-3.154	-0.0014784	468.7238369987016	86.792	1.5636	87.247	86.655	88.219	0.4543					99	37	4	0	0	0	0.7932	1	10243	10243		26.693	3.6504	1	4103600	+		12218	17271	8428	8436	13969	13969					-0.03543968895939997
GNFNPVFH	8	Unmodified	_GNFNPVFH_					0	0	0			REV__ENSG00000168143|ENST00000306858|FAM83B	REV__ENSG00000168143|ENST00000306858|FAM83B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2254333496094	2	466.224677	930.434801	-0.39455	-0.00018395	2.6308	0.0012265	2.2362	0.0010426	466.22572947027686	79.005	1.1051	79.416	79.1	80.205	0.41059					49	25	3	0	0	0	0.93529	1	9039	9039		52.299	2.7631	1	1043700	+		12219	21466	8429	8437	13970	13970					-0.03319924105289829
GNFVSIFIW	9	Unmodified	_GNFVSIFIW_					0	0	0			REV__nc|ENSG00000042781|O75445-3|USH2A	REV__nc|ENSG00000042781|O75445-3|USH2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.78515625	2	541.78711	1081.55967	-0.22268	-0.00012064	-3.1487	-0.0017059	-3.3714	-0.0018266	541.7852590351226	56.903	1.7601	56.891	56.59	58.35	-0.012203					157	62	4	0	0	0	0.47272	1	5222	5222		53.351	11.925	1	5602900	+		12220	16330	8430	8438	13971	13971					0.02214948311234366
GNFVSIFIW	9	Unmodified	_GNFVSIFIW_					0	0	0			REV__nc|ENSG00000042781|O75445-3|USH2A	REV__nc|ENSG00000042781|O75445-3|USH2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.7827758789062	2	541.78711	1081.55967	-0.1772	-9.6005E-05	-3.1928	-0.0017298	-3.37	-0.0018258	541.7852873202811	56.84	2.4261	56.873	56.56	58.986	0.033184					182	81	4	0	0	0	0.69624	1	5293	5293		40.778	1.972	1	6132200	+		12221	16330	8430	8438	13972	13972					0.02214948311234366
GNHGAPHRPR	10	Unmodified	_GNHGAPHRPR_					0	0	0		nc|ENSG00000204544|Q5SSG8-3|MUC21;ENSG00000204544|ENST00000376296|MUC21;nc|ENSG00000204544|Q5SSG8-2|MUC21	nc|ENSG00000204544|Q5SSG8-3|MUC21	nc|ENSG00000204544|Q5SSG8-3|MUC21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.7870483398438	2	549.78683	1097.55911	-0.5678	-0.00031217	0.83459	0.00045884	0.26678	0.00014667	549.7871709244522	110.43	1.0169	110.37	110.18	111.2	-0.055084					52	35	3	0	0	0	0.85466	1	12029	12029		20.947	0	1	254500			12222	8457	8431	8439	13973	13973					0.014229664347340076
GNHLVKLAN	9	Unmodified	_GNHLVKLAN_					0	0	0			REV__ENSG00000146242|ENST00000369750|TPBG	REV__ENSG00000146242|ENST00000369750|TPBG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.2775573730469	2	483.279983	964.545414	-0.75516	-0.00036495	-1.8052	-0.00087241	-2.5603	-0.0012374	483.279136890224	95.035	1.9592	95.266	94.736	96.695	0.23103					115	46	3	0	0	0	0.76255	1	9860	9860		35.618	6.4687	1	1458300	+		12223	19999	8432	8440	13974	13974					0.06172295882936396
GNIGEAAIRI	10	Unmodified	_GNIGEAAIRI_					0	0	0			REV__ENST00000375163.5_1_9:100372568-100388015:-|nuORF	REV__ENST00000375163.5_1_9:100372568-100388015:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.289794921875	2	507.290548	1012.56654	-1.7442	-0.0008848	1.5396	0.00078104	-0.20454	-0.00010376	507.29114569123766	30.055	0.55795	30.055	29.764	30.322	0					28	16	2	0	0	0	0.73395	2	1334	1334;1342		42.864	3.639	1	125300	+		12224	19346	8433	8441	13975;13976	13975					0.060762611917994036
GNIKNCER	8	Unmodified	_GNIKNCER_					0	0	0		L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|37|2|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|37|2|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|37|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.23388671875	2	467.232176	932.449799	-0.63925	-0.00029868	3.0202	0.0014112	2.381	0.0011125	467.2335443561671	68.394	1.2899	68.358	67.994	69.284	-0.036301					131	48	4	0	0	0	0.87479	1	6625	6625		30.504	1.3336	1	1309700			12225	14578	8434	8442	13977	13977					-0.01912800299612627
GNIKNCER	8	Unmodified	_GNIKNCER_					0	0	0		L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|37|2|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|37|2|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|37|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.23443603515625	2	467.232176	932.449799	-1.0177	-0.00047551	3.4534	0.0016135	2.4357	0.001138	467.2337824408168	68.11	1.4648	68.17	67.783	69.248	0.059288					157	61	4	0	0	0	0.90465	1	6190	6190		40.573	7.057	1	2841300			12226	14578	8434	8442	13978	13978					-0.01912800299612627
GNIKNCER	8	Unmodified	_GNIKNCER_					0	0	0		L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|37|2|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|37|2|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|37|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2311096191406	2	467.232176	932.449799	-0.26264	-0.00012271	2.1638	0.001011	1.9012	0.00088829	467.23346633413524	64.606	2.155	65.159	64.517	66.672	0.55386					169	56	5	0	0	0	0.89494	1	7162	7162		37.159	4.3467	1	8508300			12227	14578	8434	8442	13979	13979					-0.01912800299612627
GNIPMAGH	8	Oxidation (M)	_GNIPM(Oxidation (M))AGH_		GNIPM(1)AGH		GNIPM(55)AGH	0	0	1		nc|ENSG00000239389|Q9Y5I0-2|PCDHA13;ENSG00000239389|ENST00000289272|PCDHA13	nc|ENSG00000239389|Q9Y5I0-2|PCDHA13	nc|ENSG00000239389|Q9Y5I0-2|PCDHA13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.6874084472656	2	406.689613	811.364672	0.28379	0.00011541	-3.914	-0.0015918	-3.6302	-0.0014764	406.68799140261245	28.549	0.68845	28.585	28.255	28.944	0.03607					36	23	2	0	0	0	0.94132	1	1367	1367		54.765	14.192	1	63299			12228	8769	8435	8443	13980	13980					-0.048555457654060774
GNIQFAASE	9	Unmodified	_GNIQFAASE_					0	0	0		nc|ENSG00000278259|Q96H55-3|MYO19;ENSG00000278259|ENST00000614623|MYO19;nc|ENSG00000278259|Q96H55-4|MYO19	nc|ENSG00000278259|Q96H55-3|MYO19	nc|ENSG00000278259|Q96H55-3|MYO19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7229309082031	2	468.724707	935.43486	-1.9165	-0.00089829	-1.277	-0.00059854	-3.1934	-0.0014968	468.7241207550591	90.104	1.871	90.574	90.243	92.114	0.47068					100	46	4	0	0	0	0.78536	1	10709	10709		29.15	0.89528	1	6559600			12229	9029	8436	8444	13981	13981					-0.03543968895951366
GNIRINGCS	9	Unmodified	_GNIRINGCS_					0	0	0			REV__ENSG00000205495|ENST00000380370|OR52J3	REV__ENSG00000205495|ENST00000380370|OR52J3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2336120605469	2	467.232176	932.449799	-1.043	-0.00048731	3.6725	0.0017159	2.6295	0.0012286	467.23370254393717	68.31	1.3377	68.343	68.023	69.361	0.033005					128	53	3	0	0	0	0.67345	1	6501	6501		42.396	0.96952	1	1288900	+		12230	23560	8437	8445	13982	13982					-0.01912800299612627
GNIRINGCS	9	Unmodified	_GNIRINGCS_					0	0	0			REV__ENSG00000205495|ENST00000380370|OR52J3	REV__ENSG00000205495|ENST00000380370|OR52J3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.23382568359375	2	467.232176	932.449799	0.4755	0.00022217	2.0541	0.00095974	2.5296	0.0011819	467.23311313074316	67.929	1.2916	68.056	67.71	69.002	0.12748					151	49	4	0	0	0	0.76255	1	6163	6163		35.618	3.6634	1	2838000	+		12231	23560	8437	8445	13983	13983					-0.01912800299612627
GNIVCYNW	8	Unmodified	_GNIVCYNW_					0	0	0		ENSG00000157796|ENST00000399820|WDR19;ENST00000512448.1_1_4:39201144-39207357:+|nuORF;nc|ENSG00000157796|Q8NEZ3-2|WDR19	ENSG00000157796|ENST00000399820|WDR19	ENSG00000157796|ENST00000399820|WDR19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7187805175781	2	484.71837	967.422187	-1.6647	-0.00080692	1.5426	0.00074774	-0.1221	-5.9183E-05	484.718975245025	98.748	4.2341	98.941	95.671	99.905	0.1928					171	98	2	0	0	0	0.89962	1	10103	10103		38.806	3.6054	1	437580			12232	5449	8438	8446	13984	13984					-0.06282703559850233
GNIYRMTV	8	Unmodified	_GNIYRMTV_					0	0	0			REV__ENSG00000175093|ENST00000310546|SPSB4	REV__ENSG00000175093|ENST00000310546|SPSB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.2467346191406	2	477.247295	952.480036	-0.99941	-0.00047697	-0.47414	-0.00022628	-1.4736	-0.00070325	477.24689896657776	68.408	1.3826	68.468	68.071	69.453	0.059288					117	57	3	0	0	0	0.89962	1	6113	6113		38.806	3.6054	1	557930	+		12233	22038	8439	8447	13985	13985					0.0018955836559371164
GNKETPPG	8	Unmodified	_GNKETPPG_					0	0	0		ENST00000604123.5_1_19:41860151-41884317:+|nuORF	ENST00000604123.5_1_19:41860151-41884317:+|nuORF	ENST00000604123.5_1_19:41860151-41884317:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1988830566406	2	400.200867	798.387182	1.235	0.00049424	-3.6984	-0.0014801	-2.4635	-0.00098588	400.2007500976596	65.261	1.216	65.647	64.776	65.992	0.38615					58	31	3	0	0	0	0.9295	1	7004	7004		55.504	5.4797	1	302440			12234	14426	8440	8448	13986	13986					-0.020076230961308283
GNKETPPG	8	Unmodified	_GNKETPPG_					0	0	0		ENST00000604123.5_1_19:41860151-41884317:+|nuORF	ENST00000604123.5_1_19:41860151-41884317:+|nuORF	ENST00000604123.5_1_19:41860151-41884317:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.20086669921875	2	400.200867	798.387182	-0.072413	-2.898E-05	-3.5103	-0.0014048	-3.5827	-0.0014338	400.2011984622312	64.759	1.0181	65.313	64.852	65.87	0.55386					57	25	3	0	0	0	0.87259	2	7098	7084;7098		58.782	10.866	1	265310			12235	14426	8440	8448	13987;13988	13988					-0.020076230961308283
GNKKAAQVK	9	Unmodified	_GNKKAAQVK_					0	0	0			REV__ENSG00000151882|ENST00000361115|CCL28	REV__ENSG00000151882|ENST00000361115|CCL28	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2880859375	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.6	1	116.57	116.07	117.07	-0.02433								0	0	0	0.3307	1	12914	12914		19.997	2.5288	1		+		12236	20275	8441	8449	13989	13989					0.0874858239999412
GNKKAAQVK	9	Unmodified	_GNKKAAQVK_					0	0	0			REV__ENSG00000151882|ENST00000361115|CCL28	REV__ENSG00000151882|ENST00000361115|CCL28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28759765625	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.7932	1	10399	10399		24.203	0	1	48574000	+		12237	20275	8441	8449	13990	13990					0.0874858239999412
GNKLARVAA	9	Unmodified	_GNKLARVAA_					0	0	0		ENSG00000171236|ENST00000306390|LRG1	ENSG00000171236|ENST00000306390|LRG1	ENSG00000171236|ENST00000306390|LRG1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2732849121094	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.2	1	113.23	112.73	113.73	0.027321								0	0	0	0.31828	1	12365	12365		24.203	0	1				12238	6651	8442	8450	13991	13991					0.08152313228515595
GNKPSRLK	8	Unmodified	_GNKPSRLK_					0	0	0		ENSG00000009413|ENST00000368802|REV3L;nc|ENSG00000009413|O60673-2|REV3L	ENSG00000009413|ENST00000368802|REV3L	ENSG00000009413|ENST00000368802|REV3L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2737731933594	2	450.274701	898.534849	-1.0413	-0.00046886	1.2903	0.00058099	0.24902	0.00011213	450.2751780304547	97.596	1.8622	97.596	96.898	98.76	0					87	44	3	0	0	0	0.87922	1	9812	9812		31.955	5.1588	1	262970			12239	754	8443	8451	13992	13992					0.08152313228515595
GNLEYGNLG	9	Unmodified	_GNLEYGNLG_					0	0	0			REV__ENSG00000052850|ENST00000652299|ALX4	REV__ENSG00000052850|ENST00000652299|ALX4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72314453125	2	468.724707	935.43486	0.80556	0.00037759	-3.8272	-0.0017939	-3.0216	-0.0014163	468.7228502568121	90.007	1.4889	90.457	90.184	91.673	0.45058					91	38	4	0	0	0	0.78528	1	10639	10639		29.17	0.91578	1	5665600	+		12240	16386	8444	8452	13993	13993					-0.03543968895939997
GNLFATTLP	9	Unmodified	_GNLFATTLP_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000016285	REV__CON__ENSEMBL:ENSBTAP00000016285	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2533874511719	2	467.255643	932.496732	-0.56986	-0.00026627	0.38452	0.00017967	-0.18534	-8.6602E-05	467.2556061981936	61.592	1.0197	62.146	61.843	62.863	0.55386					33	23	3	0	0	0	0.51307	1	6588	6588		51.335	1.8939	1	181000	+	+	12241	15960	8445	8453	13994	13994					0.027783825231722403
GNLLMINV	8	Unmodified	_GNLLMINV_					0	0	0			REV__nc|ENSG00000163629|Q12923-2|PTPN13	REV__nc|ENSG00000163629|Q12923-2|PTPN13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26556396484375	2	437.246763	872.478974	2.9191	0.0012764	1.6097	0.00070386	4.5289	0.0019802	437.24820597457307	25.694	0.37653	25.263	25.191	25.568	-0.4311					11	8	2	0	0	0	0.4196	1	1356	1356		45.952	0	1	31134	+		12242	20947	8446	8454	13995	13995					0.03763343996683943
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.2334899902344	2	467.232176	932.449799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.945	1	69.945	69.445	70.445	0								0	0	0	0.31001	1	6241	6241		42.864	7.7122	1				12243	5432	8447	8455	13996	13996					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.2334899902344	2	467.232176	932.449799	-0.11758	-5.4936E-05	2.8525	0.0013328	2.7349	0.0012778	467.2333042677725	68.306	1.2873	68.328	67.991	69.278	0.021599					130	57	3	0	0	0	0.44421	4	6483	6425;6465;6483;6502		54.776	7.119	1	1529800			12244	5432	8447	8455	13997;13998;13999;14000	13999					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.2333984375	2	467.232176	932.449799	-0.63925	-0.00029868	3.0202	0.0014112	2.381	0.0011125	467.2335443561671	68.394	1.2899	68.358	67.994	69.284	-0.036301					131	48	4	0	0	0	0.39367	3	6606	6567;6591;6606		58.23	15.364	1	1309700			12245	5432	8447	8455	14001;14002;14003	14003					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.23272705078125	2	467.232176	932.449799	-0.78556	-0.00036704	3.411	0.0015937	2.6254	0.0012267	467.2336097851308	69.799	1.6914	69.762	69.451	71.142	-0.036964					147	87	2	0	0	0	0.64555	1	6773	6773		44.377	5.3557	1	4050000			12246	5432	8447	8455	14004	14004					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2332763671875	2	467.232176	932.449799	-1.043	-0.00048731	3.6725	0.0017159	2.6295	0.0012286	467.23370254393717	68.31	1.3377	68.343	68.023	69.361	0.033005					128	53	3	0	0	0	0.48102	3	6525	6510;6525;6533		52.937	7.1661	1	1288900			12247	5432	8447	8455	14005;14006;14007	14006					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2330627441406	2	467.232176	932.449799	-0.9513	-0.00044448	3.5603	0.0016635	2.609	0.001219	467.2337078119893	69.729	1.4716	69.765	69.399	70.87	0.035614					135	74	2	0	0	0	0.24527	5	6687	6667;6672;6677;6682;6687		69.628	9.3337	1	2912300			12248	5432	8447	8455	14008;14009;14010;14011;14012	14012					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.2333984375	2	467.232176	932.449799	-1.0422	-0.00048693	3.5338	0.0016511	2.4916	0.0011642	467.23380164983837	67.827	1.4777	67.962	67.582	69.06	0.13521					154	58	4	0	0	0	0.66686	4	6068	6068;6104;6112;6130		42.864	3.6114	1	2802800			12249	5432	8447	8455	14013;14014;14015;14016	14013					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.2332763671875	2	467.232176	932.449799	-1.0397	-0.00048579	3.5395	0.0016538	2.4998	0.001168	467.23372611150774	69.413	2.1998	69.548	69.082	71.282	0.13522					162	104	3	0	0	0	0.51592	3	6300	6286;6295;6300		51.193	5.571	1	8546900			12250	5432	8447	8455	14017;14018;14019	14019					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.23345947265625	2	467.232176	932.449799	0.4755	0.00022217	2.0541	0.00095974	2.5296	0.0011819	467.23311313074316	67.929	1.2916	68.056	67.71	69.002	0.12748					151	49	4	0	0	0	0.44421	5	6125	6084;6092;6101;6117;6125		54.776	10.541	1	2838000			12251	5432	8447	8455	14020;14021;14022;14023;14024	14024					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.23406982421875	2	467.232176	932.449799	0.48872	0.00022835	2.1523	0.0010056	2.6411	0.001234	467.2330448389886	69.415	1.8077	69.544	68.979	70.786	0.1291					180	87	3	0	0	0	0.48102	2	6312	6306;6312		52.937	2.9312	1	9201900			12252	5432	8447	8455	14025;14026	14026					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.23345947265625	2	467.232176	932.449799	-1.0177	-0.00047551	3.4534	0.0016135	2.4357	0.001138	467.2337824408168	68.11	1.4648	68.17	67.783	69.248	0.059288					157	61	4	0	0	0	0.39367	4	6112	6096;6112;6122;6151		58.23	5.2932	1	2841300			12253	5432	8447	8455	14027;14028;14029;14030	14028					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.2335205078125	2	467.232176	932.449799	-1.0713	-0.00050052	2.8265	0.0013206	1.7553	0.00082011	467.2337815717814	69.637	1.4406	69.703	69.254	70.695	0.065506					156	70	4	0	0	0	0.51592	2	6294	6272;6294		51.193	3.5354	1	9146400			12254	5432	8447	8455	14031;14032	14032					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.23223876953125	2	467.232176	932.449799	-0.82332	-0.00038468	2.7607	0.0012899	1.9374	0.00090522	467.2334921608077	63.726	1.0387	64.113	63.444	64.483	0.38681					60	23	4	0	0	0	0.75725	1	6888	6888		36.447	0.82846	1	272720			12255	5432	8447	8455	14033	14033					-0.019128002996012583
GNLMSQARG	9	Unmodified	_GNLMSQARG_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2337951660156	2	467.232176	932.449799	-0.45838	-0.00021417	2.4009	0.0011218	1.9425	0.00090762	467.23359025373514	64.723	2.0657	65.109	64.482	66.548	0.38615					153	52	5	0	0	0	0.48102	1	7091	7091		52.937	1.6012	1	8112800			12256	5432	8447	8455	14034	14034					-0.019128002996012583
GNLQDASKT	9	Unmodified	_GNLQDASKT_					0	0	0			REV__nc|ENSG00000187627|P0DJD0|RGPD1	REV__nc|ENSG00000187627|P0DJD0|RGPD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.23388671875	2	467.235439	932.456324	-1.0177	-0.00047551	-3.5294	-0.001649	-4.5471	-0.0021246	467.2337824408168	68.11	1.4648	68.17	67.783	69.248	0.059288					157	61	4	0	0	0	0.68711	1	6163	6163		41.427	4.9799	1	2841300	+		12257	22758	8448	8456	14035	14035					-0.012605838672470782
GNLQQCYQ	8	Unmodified	_GNLQQCYQ_					0	0	0			REV__ENST00000455355.5_1_3:197785546-197786035:-|nuORF	REV__ENST00000455355.5_1_3:197785546-197786035:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7285461425781	2	477.210909	952.407265	0.35376	0.00016882	1.2912	0.00061615	1.6449	0.00078497	477.2122073597741	98.017	0.40909	98.394	98.081	98.49	0.37679					15	9	3	0	0	0	0.4196	1	11802	11802		60.294	23.135	1	51146	+		12258	26939	8449	8457	14036	14036					-0.07084195427842133
GNLRPPQVKAK	11	Unmodified	_GNLRPPQVKAK_					0	0	0			REV__ENSG00000136932|ENST00000375119|TRMO	REV__ENSG00000136932|ENST00000375119|TRMO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2467956542969	3	403.247173	1206.71969	-1.9293	-0.00077799	1.1746	0.00047366	-0.7547	-0.00030433	403.24758115209465	104.53	3.0767	104.62	103.79	106.87	0.093857					248	75	5	0	0	0	0.7434	2	11086	11086;11099		15.921	0.53556	1	9819800	+		12259	19349	8450	8458	14037;14038	14037					0.12459876308253115
GNLRTAAP	8	Unmodified	_GNLRTAAP_					0	0	0			REV__ENST00000467873.1_1_3:183882564-183882771:+|nuORF	REV__ENST00000467873.1_1_3:183882564-183882771:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2253723144531	2	400.224677	798.434801	-0.24227	-9.6962E-05	3.1489	0.0012602	2.9066	0.0011633	400.22586635628164	40.347	1.7799	40.299	40.01	41.79	-0.04789					125	60	3	0	0	0	0.9295	1	2540	2540		55.504	9.5523	1	1238600	+		12260	27169	8451	8459	14039	14039					0.027520758947048307
GNLRTAAP	8	Unmodified	_GNLRTAAP_					0	0	0			REV__ENST00000467873.1_1_3:183882564-183882771:+|nuORF	REV__ENST00000467873.1_1_3:183882564-183882771:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.22650146484375	2	400.224677	798.434801	1.1683	0.00046758	3.5853	0.0014349	4.7536	0.0019025	400.2259734207164	34.839	1.4569	35.22	34.977	36.434	0.3812					102	37	3	0	0	0	0.89962	3	2644	2644;2668;2746		38.806	3.6054	1	1604200	+		12261	27169	8451	8459	14040;14041;14042	14040					0.027520758947048307
GNLSLRLH	8	Unmodified	_GNLSLRLH_					0	0	0			REV__ENSG00000160999|ENST00000444095|SH2B2	REV__ENSG00000160999|ENST00000444095|SH2B2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.26611328125	2	455.266876	908.519199	-1.2616	-0.00057436	-0.28674	-0.00013054	-1.5483	-0.0007049	455.2666275399711	38.633	1.2081	38.975	38.537	39.745	0.34187					55	28	4	0	0	0	0.91977	1	3185	3185		45.952	5.3793	1	605190	+		12262	20756	8452	8460	14043	14043					0.06128026711462553
GNLSSPQYA	9	Unmodified	_GNLSSPQYA_					0	0	0			REV__ENST00000603027.5_2_10:75562299-75563341:-|nuORF	REV__ENST00000603027.5_2_10:75562299-75563341:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7228088378906	2	468.724707	935.43486	0.80556	0.00037759	-3.8272	-0.0017939	-3.0216	-0.0014163	468.7228502568121	90.007	1.4889	90.457	90.184	91.673	0.45058					91	38	4	0	0	0	0.64922	2	10628	10628;10662		44.117	1.6423	1	5665600	+		12263	29340	8453	8461	14044;14045	14044					-0.03543968895951366
GNLSSPQYA	9	Unmodified	_GNLSSPQYA_					0	0	0			REV__ENST00000603027.5_2_10:75562299-75563341:-|nuORF	REV__ENST00000603027.5_2_10:75562299-75563341:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.72344970703125	2	468.724707	935.43486	-1.9165	-0.00089829	-1.277	-0.00059854	-3.1934	-0.0014968	468.7241207550591	90.104	1.871	90.574	90.243	92.114	0.47068					100	46	4	0	0	0	0.77546	1	10696	10696		31.955	2.8053	1	6559600	+		12264	29340	8453	8461	14046	14046					-0.03543968895951366
GNMIISYR	8	Unmodified	_GNMIISYR_					0	0	0			REV__ENSG00000179055|ENST00000641530|OR13D1	REV__ENSG00000179055|ENST00000641530|OR13D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2469787597656	2	477.247295	952.480036	-0.88369	-0.00042174	-0.86186	-0.00041132	-1.7455	-0.00083306	477.24693641483543	64.828	2.6891	65.382	64.729	67.418	0.55386					152	75	5	0	0	0	0.91472	1	7090	7090		44.117	6.9577	1	2295100	+		12265	22312	8454	8462	14047	14047					0.0018955836559371164
GNNCENSD	8	Unmodified	_GNNCENSD_					0	0	0			REV__ENSG00000184083|ENST00000375180|FAM120C	REV__ENSG00000184083|ENST00000375180|FAM120C	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	427.302734375	2	426.643056	851.27156	1.047	0.00044669	1.4553	0.00062088	2.5023	0.0010676	426.64449023660137	62.861	0.12064	62.889	62.801	62.922	0.028133					6	4	2	0	0	0	0.4196	1	5873	5873		9.7057	6.5464	1	23579	+		12266	22644	8455	8463	14048	14048					-0.16002515009301987
GNNGKTDEI	9	Unmodified	_GNNGKTDEI_					0	0	0			REV__ENST00000469980.1_1_2:170336021-170338908:+|nuORF	REV__ENST00000469980.1_1_2:170336021-170338908:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.22265625	2	474.225071	946.435589	-0.93499	-0.00044339	-3.7911	-0.0017978	-4.7261	-0.0022412	474.2234010405558	66.547	1.5603	67.098	66.602	68.163	0.55071					86	44	4	0	0	0	0.78058	1	7269	7269		30.504	1.3541	1	724640	+		12267	20881	8456	8464	14049	14049					-0.03977174246904269
GNNKIYSKVNS	11	Unmodified	_GNNKIYSKVNS_					0	0	0			REV__ENSG00000107771|ENST00000372088|CCSER2	REV__ENSG00000107771|ENST00000372088|CCSER2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.2367553710938	2	612.322576	1222.6306	0.10273	6.2906E-05	3.4911	0.0021377	3.5938	0.0022006	612.3247769908639	64.192	0.67451	64.158	63.85	64.525	-0.034256					28	17	2	0	0	0	0.17382	1	6101	6101		16.007	0	1	103750	+		12268	17673	8457	8465	14050	14050					0.028189965580850185
GNNTKENNPE	10	Unmodified	_GNNTKENNPE_					0	0	0			REV__ENSG00000108001|ENST00000440978|EBF3	REV__ENSG00000108001|ENST00000440978|EBF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.7508544921875	2	558.749441	1115.48433	0.17906	0.00010005	2.5871	0.0014455	2.7662	0.0015456	558.7510644977383	80.731	0.62182	81.152	80.848	81.47	0.4215					32	14	4	0	0	0	0.78666	1	9276	9276		40.058	6.1365	1	473950	+		12269	17688	8458	8466	14051	14051					-0.06879305677830416
GNNTKENNPE	10	Unmodified	_GNNTKENNPE_					0	0	0			REV__ENSG00000108001|ENST00000440978|EBF3	REV__ENSG00000108001|ENST00000440978|EBF3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	558.749441	1115.48433	0.17906	0.00010005	2.5871	0.0014455	2.7662	0.0015456	558.7510644977383	80.731	0.62182	81.152	80.848	81.47	0.4215	-0.014686	-0.00026012	NaN	40.058	32	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	473950	+		12270	17688	8458	8466							-0.06879305677830416
GNNTKENNPE	10	Unmodified	_GNNTKENNPE_					0	0	0			REV__ENSG00000108001|ENST00000440978|EBF3	REV__ENSG00000108001|ENST00000440978|EBF3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	558.749441	1115.48433	-0.019511	-1.0902E-05	2.9112	0.0016266	2.8917	0.0016157	558.7510558359523	80.655	0.66187	81.181	80.864	81.526	0.52676	0.014686	0.00010208	NaN	40.058	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	525470	+		12271	17688	8458	8466							-0.06879305677830416
GNNVEKPLE	9	Unmodified	_GNNVEKPLE_					0	0	0		ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.256591796875	2	500.258914	998.503274	-0.60497	-0.00030264	-3.248	-0.0016249	-3.853	-0.0019275	500.2570143399608	52.837	0.70274	53.261	52.97	53.673	0.42348					40	16	3	0	0	0	0.64555	1	5317	5317		44.377	3.8046	1	1020700			12272	951	8459	8467	14052	14052					0.0039627568389732915
GNPKVKAHGKK	11	Unmodified	_GNPKVKAHGKK_					0	0	0		CON__Q3SX09;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3540649414062	2	582.354014	1162.69348	0.055419	3.2273E-05	-0.084955	-4.9474E-05	-0.029536	-1.72E-05	582.3539492159867	15.513	0.1927	15.433	15.321	15.514	-0.080017					17	7	3	0	0	0	0.60058	1	26	26		44.377	1.5129	1	333590		+	12273	8826;620	8460	8468	14053	14053					0.1186360713677459
GNPKVKAHGKK	11	Unmodified	_GNPKVKAHGKK_					0	0	0		CON__Q3SX09;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3536376953125	2	582.354014	1162.69348	-0.043239	-2.518E-05	0.072078	4.1975E-05	0.028839	1.6795E-05	582.3539101386576	15.424	0.35997	15.341	15.161	15.521	-0.083363					32	15	4	0	0	0	0.28254	1	41	41		75.043	25.602	1	274470		+	12274	8826;620	8460	8468	14054	14054					0.1186360713677459
GNPKVKAHGKK	11	Unmodified	_GNPKVKAHGKK_					0	0	0		CON__Q3SX09;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	582.354014	1162.69348	1.0386	0.00060486	-2.4716	-0.0014393	-1.4329	-0.00083447	582.3530174632053	15.362	0.14855	15.337	15.269	15.417	-0.024207	-0.032805	-0.0027653	NaN	75.043	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24421		+	12275	8826;620	8460	8468							0.1186360713677459
GNPPLKEWQSL	11	Unmodified	_GNPPLKEWQSL_					0	0	0		nc|ENSG00000113790|Q08426-2|EHHADH;ENSG00000113790|ENST00000231887|EHHADH	nc|ENSG00000113790|Q08426-2|EHHADH	nc|ENSG00000113790|Q08426-2|EHHADH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8338623046875	2	634.83532	1267.65609	0.71804	0.00045584	-4.2454	-0.0026951	-3.5274	-0.0022393	634.8325592280905	18.615	0.32789	18.138	17.937	18.264	-0.47694					14	6	3	0	0	0	0.61369	1	416	416		42.864	1.4377	1	81560			12276	2745	8461	8469	14055	14055					0.03296471080511765
GNPVSLSTNS	10	Unmodified	_GNPVSLSTNS_					0	0	0		ENSG00000100139|ENST00000215957|MICALL1	ENSG00000100139|ENST00000215957|MICALL1	ENSG00000100139|ENST00000215957|MICALL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	488.2389831542969	2	488.240721	974.466889	0.42908	0.0002095	-4.2628	-0.0020813	-3.8337	-0.0018718	488.2385342290814	60.594	0.80984	60.711	60.313	61.123	0.11676					92	32	5	0	0	0	0.85981	1	5250	5250		35.152	0.97948	1	1254500			12277	1801	8462	8470	14056	14056					-0.021366012127941758
GNPVSLSTNS	10	Unmodified	_GNPVSLSTNS_					0	0	0		ENSG00000100139|ENST00000215957|MICALL1	ENSG00000100139|ENST00000215957|MICALL1	ENSG00000100139|ENST00000215957|MICALL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	488.238525390625	2	488.240721	974.466889	-0.68617	-0.00033502	-3.2974	-0.0016099	-3.9835	-0.0019449	488.23901315682974	60.731	0.68857	60.739	60.422	61.11	0.0081215					89	25	5	0	0	0	0.73395	1	5264	5264		42.864	2.2917	1	1290700			12278	1801	8462	8470	14057	14057					-0.021366012127941758
GNQEMLQR	8	Unmodified	_GNQEMLQR_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	488.2386474609375	2	488.237458	974.460364	0.42909	0.0002095	2.4196	0.0011813	2.8486	0.0013908	488.2385342290814	60.594	0.80984	60.711	60.313	61.123	0.11676					92	32	5	0	0	0	0.88185	1	5242	5242		32.812	1.2826	1	1254500	+		12279	16310	8463	8471	14058	14058					-0.027888176451710933
GNQPRKGL	8	Unmodified	_GNQPRKGL_					0	0	0			REV__ENSG00000177992|ENST00000325643|SPATA31E1	REV__ENSG00000177992|ENST00000325643|SPATA31E1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25128173828125	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.86288	1	7587	7587		26.796	1.3459	1	2494100	+		12280	22244	8464	8472	14059	14059					0.04839453677391248
GNQSEEAVAAY	11	Unmodified	_GNQSEEAVAAY_					0	0	0		nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-4|PEX5	nc|ENSG00000139197|P50542-2|PEX5	nc|ENSG00000139197|P50542-2|PEX5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.7534790039062	2	569.754192	1137.49383	-0.19873	-0.00011322	-0.18438	-0.00010505	-0.38311	-0.00021828	569.7541529060605	27.228	0.41086	27.189	26.934	27.345	-0.038523					16	9	2	0	0	0	0.68532	1	1291	1291		33.922	2.3918	1	39456			12281	4354	8465	8473	14060	14060					-0.06941537392276587
GNQSEEAVAAY	11	Unmodified	_GNQSEEAVAAY_					0	0	0		nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-4|PEX5	nc|ENSG00000139197|P50542-2|PEX5	nc|ENSG00000139197|P50542-2|PEX5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	569.754192	1137.49383	-0.56575	-0.00032234	1.1246	0.00064075	0.55886	0.00031842	569.754682695357	26.998	0.41507	27.039	26.816	27.231	0.040834	-0.12447	0.0016053	NaN	33.922	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28191			12282	4354	8465	8473							-0.06941537392276587
GNQSEEAVAAY	11	Unmodified	_GNQSEEAVAAY_					0	0	0		nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-4|PEX5	nc|ENSG00000139197|P50542-2|PEX5	nc|ENSG00000139197|P50542-2|PEX5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	569.754192	1137.49383	1.1292	0.00064338	-1.2622	-0.00071917	-0.13302	-7.579E-05	569.7534531498932	27.29	0.41633	27.262	27.048	27.464	-0.027704	0.098741	-0.0011145	NaN	33.922	20	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34963			12283	4354	8465	8473							-0.06941537392276587
GNRCQVISG	9	Unmodified	_GNRCQVISG_					0	0	0		ENST00000537952.1_1_12:118619315-118619396:-|nuORF	ENST00000537952.1_1_12:118619315-118619396:-|nuORF	ENST00000537952.1_1_12:118619315-118619396:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2350769042969	2	467.232176	932.449799	-0.45838	-0.00021417	2.4009	0.0011218	1.9425	0.00090762	467.23359025373514	64.723	2.0657	65.109	64.482	66.548	0.38615					153	52	5	0	0	0	0.77244	1	7148	7148		32.812	0.85756	1	8112800			12284	13455	8466	8474	14061	14061					-0.019128002995898896
GNRVTLALN	9	Unmodified	_GNRVTLALN_					0	0	0			REV__ENST00000520983.5_1_8:28651295-28747426:-|nuORF	REV__ENST00000520983.5_1_8:28651295-28747426:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27581787109375	2	479.277441	956.540328	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.529	1	16.446	15.946	16.946	-0.083363								0	0	0	0.29475	1	148	148		32.812	4.5581	1		+		12285	17445	8467	8475	14062	14062					0.060319920203255606
GNSVSLDFQ	9	Unmodified	_GNSVSLDFQ_					0	0	0		nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1;ENSG00000104067|ENST00000614355|TJP1	nc|ENSG00000104067|Q07157-2|TJP1	nc|ENSG00000104067|Q07157-2|TJP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.72930908203125	2	483.729989	965.445425	-0.38753	-0.00018746	-2.2221	-0.0010749	-2.6096	-0.0012623	483.72871360991206	72.116	0.82655	72.666	72.154	72.981	0.55008					51	19	4	0	0	0	0.74721	1	8084	8084		37.159	0.13063	1	1356300			12286	2113	8468	8476	14063	14063					-0.0386798624150515
GNTAATAESR	10	Unmodified	_GNTAATAESR_					0	0	0			REV__ENSG00000183354|ENST00000399933|KIAA2026	REV__ENSG00000183354|ENST00000399933|KIAA2026	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.236328125	2	489.23597	976.457387	-0.1238	-6.0567E-05	1.5892	0.00077748	1.4654	0.00071691	489.2366149761762	63.867	1.3199	63.833	63.53	64.85	-0.034256					75	37	3	0	0	0	0.57924	1	6060	6060		51.193	14.034	1	621870	+		12287	22601	8469	8477	14064	14064					-0.03178369498334632
GNTAATAESR	10	Unmodified	_GNTAATAESR_					0	0	0			REV__ENSG00000183354|ENST00000399933|KIAA2026	REV__ENSG00000183354|ENST00000399933|KIAA2026	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	489.23597	976.457387	-0.79431	-0.00038861	1.4141	0.00069184	0.61982	0.00030324	489.2369318050657	63.711	0.26025	64.098	64.004	64.265	0.38681	0.23135	-0.00085916	NaN	51.193	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43251	+		12288	22601	8469	8477							-0.03178369498334632
GNVALKIHN	9	Unmodified	_GNVALKIHN_					0	0	0		nc|ENSG00000204290|Q9UIR0-3|BTNL2;nc|ENSG00000204290|Q9UIR0-2|BTNL2;nc|ENSG00000204290|Q9UIR0-1|BTNL2;ENSG00000204290|ENST00000454136|BTNL2	nc|ENSG00000204290|Q9UIR0-3|BTNL2	nc|ENSG00000204290|Q9UIR0-3|BTNL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2795715332031	2	483.279983	964.545414	1.5983	0.00077242	-3.3744	-0.0016308	-1.7761	-0.00085837	483.2783922917404	94.904	1.8969	95.336	94.89	96.787	0.4324					93	45	3	0	0	0	0.7932	1	11342	11342		23.042	0	1	659840			12289	8430	8470	8478	14065	14065					0.061722958829250274
GNVFEYGVK	9	Unmodified	_GNVFEYGVK_					0	0	0		nc|ENSG00000000971|P08603|CFH;ENSG00000000971|ENST00000367429|CFH;nc|ENSG00000000971|P08603-2|CFH	nc|ENSG00000000971|P08603|CFH	nc|ENSG00000000971|P08603|CFH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.75738525390625	2	506.758549	1011.50255	-0.14296	-7.2445E-05	-3.5843	-0.0018164	-3.7273	-0.0018888	506.7565004715063	23.302	0.58158	23.25	22.906	23.487	-0.052113					37	19	3	0	0	0	0.51307	1	816	816		51.335	0	1	63577			12290	647	8471	8479	14066	14066					-0.002745189651363944
GNVIHTDL	8	Unmodified	_GNVIHTDL_					0	0	0			REV__nc|ENSG00000139132|Q96M96-3|FGD4	REV__nc|ENSG00000139132|Q96M96-3|FGD4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801208496094	2	434.729792	867.445031	1.473	0.00064035	-1.0692	-0.00046482	0.40377	0.00017553	434.72924507488676	34.367	0.70125	34.672	34.282	34.984	0.30494					40	16	3	0	0	0	0.4196	1	2569	2569		27.882	0	1	1215400	+		12291	19517	8472	8480	14067	14067					0.006006388292917109
GNVIIETK	8	Unmodified	_GNVIIETK_					0	0	0		ENSG00000156973|ENST00000287600|PDE6D	ENSG00000156973|ENST00000287600|PDE6D	ENSG00000156973|ENST00000287600|PDE6D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7710876464844	2	437.255643	872.496732	-0.0035485	-1.5516E-06	1.0926	0.00047773	1.089	0.00047617	437.2556711060255	37.596	1.3078	37.909	37.042	38.35	0.31312					50	32	2	0	0	0	0.4196	1	3065	3065		26.693	15.827	1	349510			12292	5404	8473	8481	14068	14068					0.05538382523184282
GNVRLVKTT	9	Unmodified	_GNVRLVKTT_					0	0	0			REV__ENSG00000204351|ENST00000375394|SKIC2	REV__ENSG00000204351|ENST00000375394|SKIC2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.29876708984375	2	494.300916	986.587279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.059	1	14.976	14.476	15.476	-0.083363								0	0	0	0.34348	1	7	7		16.473	1.809	1		+		12293	23485	8474	8482	14069	14069					0.09344851571461277
GNVRLVKTT	9	Unmodified	_GNVRLVKTT_					0	0	0			REV__ENSG00000204351|ENST00000375394|SKIC2	REV__ENSG00000204351|ENST00000375394|SKIC2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.29833984375	2	494.300916	986.587279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.414	1	16.33	15.83	16.83	-0.083363								0	0	0	0.30778	1	136	136		27.882	2.4321	1		+		12294	23485	8474	8482	14070	14070					0.09344851571461277
GNVRLVKTT	9	Unmodified	_GNVRLVKTT_					0	0	0			REV__ENSG00000204351|ENST00000375394|SKIC2	REV__ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.30072021484375	2	494.300916	986.587279	0.76681	0.00037903	-1.1549	-0.00057088	-0.38812	-0.00019185	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.76764	2	9997	9997;10226		34.173	3.6689	1	52135000	+		12295	23485	8474	8482	14071;14072	14071					0.09344851571461277
GNVRLVKTT	9	Unmodified	_GNVRLVKTT_					0	0	0			REV__ENSG00000204351|ENST00000375394|SKIC2	REV__ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3006896972656	2	494.300916	986.587279	0.79689	0.0003939	-0.92973	-0.00045957	-0.13284	-6.5664E-05	494.3003729915352	100.82	1.5238	100.97	100.42	101.94	0.14352					78	36	3	0	0	0	0.78058	1	10480	10480		30.504	6.3009	1	706980	+		12296	23485	8474	8482	14073	14073					0.09344851571461277
GNVRLVKTT	9	Unmodified	_GNVRLVKTT_					0	0	0			REV__ENSG00000204351|ENST00000375394|SKIC2	REV__ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3003234863281	2	494.300916	986.587279	0.79727	0.00039409	-0.70769	-0.00034981	0.089574	4.4277E-05	494.30060653822994	103.34	1.0251	103.46	103.09	104.12	0.12622					57	25	3	0	0	0	0.78058	1	10928	10928		30.504	0	1	689170	+		12297	23485	8474	8482	14074	14074					0.09344851571461277
GNVRLVKTT	9	Unmodified	_GNVRLVKTT_					0	0	0			REV__ENSG00000204351|ENST00000375394|SKIC2	REV__ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.30096435546875	2	494.300916	986.587279	1.003	0.00049577	-1.194	-0.00059017	-0.19099	-9.4404E-05	494.3002402240543	96.954	3.9557	97.359	96.674	100.63	0.40498					299	97	6	0	0	0	0.76255	1	11608	11608		35.618	1.4457	1	25258000	+		12298	23485	8474	8482	14075	14075					0.09344851571461277
GNVRLVKTT	9	Unmodified	_GNVRLVKTT_					0	0	0			REV__ENSG00000204351|ENST00000375394|SKIC2	REV__ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.30078125	2	494.300916	986.587279	0.88078	0.00043537	-1.0905	-0.00053901	-0.20967	-0.00010364	494.3002880194073	97.072	3.8769	97.462	96.82	100.7	0.39066					309	95	6	0	0	0	0.74721	1	11778	11778		37.159	0	1	27149000	+		12299	23485	8474	8482	14076	14076					0.09344851571461277
GNVTLTVE	8	Unmodified	_GNVTLTVE_					0	0	0			REV__nc|ENSG00000149571|Q8IZU9-2|KIRREL3	REV__nc|ENSG00000149571|Q8IZU9-2|KIRREL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.2598571777344	2	416.724175	831.433798	1.5157	0.00063163	1.7163	0.0007152	3.232	0.0013468	416.7234971547827	27.399	0.51398	27.144	26.811	27.325	-0.25465					13	11	2	0	0	0	0.4196	1	1592	1592		24.203	0	1	37653	+		12300	20179	8475	8483	14077	14077					0.011338167351482298
GNYLNPAC	8	Unmodified	_GNYLNPAC_					0	0	0		ENSG00000102098|ENST00000251900|SCML2	ENSG00000102098|ENST00000251900|SCML2	ENSG00000102098|ENST00000251900|SCML2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.1806945800781	2	426.189445	850.364338	1.8739	0.00079862	2.9633	0.0012629	4.8372	0.0020616	426.1904930964937	101.89	0.90185	102.15	101.87	102.78	0.26322					47	21	3	0	0	0	0.4196	1	12440	12440		11.511	0	1	412000			12301	1990	8476	8484	14078	14078					-0.06682965485265413
GPAGGLVSVR	10	Unmodified	_GPAGGLVSVR_					0	0	0			REV__nc|ENSG00000147256|Q6ZRI8-4|ARHGAP36	REV__nc|ENSG00000147256|Q6ZRI8-4|ARHGAP36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7673034667969	2	456.766709	911.518865	0.70674	0.00032282	1.3073	0.00059714	2.0141	0.00091996	456.76699198798764	16.46	0.22921	16.377	16.291	16.52	-0.083363					20	10	3	0	0	0	0.86201	1	138	138		24.203	1.1603	1	172740	+		12302	29920	8477	8485	14079	14079					0.05956606991605895
GPAGGRRR	8	Unmodified	_GPAGGRRR_					0	0	0			REV__ENST00000485972.5_1_7:150755117-150755342:-|nuORF	REV__ENST00000485972.5_1_7:150755117-150755342:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2362060546875	2	413.74136	825.468167	-1.3607	-0.00056298	-2.2098	-0.00091427	-3.5705	-0.0014773	413.74051567613765	75.753	0.65771	75.753	75.469	76.126	0					39	23	2	0	0	0	0.4196	1	6872	6872		25.45	6.0902	1	77672	+		12303	27535	8478	8486	14080	14080					0.048451224572772844
GPAGKKGKNG	10	Unmodified	_GPAGKKGKNG_					0	0	0			REV__nc|ENSG00000171502|Q17RW2-2|COL24A1	REV__nc|ENSG00000171502|Q17RW2-2|COL24A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2640380859375	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.8608	1	7862	7862		34.173	0	1	4732500	+		12304	21741	8479	8487	14081	14081					0.05435722848858404
GPAGKRLL	8	Unmodified	_GPAGKRLL_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24835205078125	2	406.261062	810.507572	3.0787	0.0012507	-3.3838	-0.0013747	-0.30516	-0.00012397	406.25986960537585	88.222	0.89349	88.272	87.945	88.839	0.050415					37	21	3	0	0	0	0.4196	1	9012	9012		8.2313	4.547	1	262430	+		12305	23574	8480	8488	14082	14082					0.09473829688124624
GPAGKRLL	8	Unmodified	_GPAGKRLL_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2484130859375	2	406.261062	810.507572	-1.8134	-0.00073671	-2.0514	-0.00083338	-3.8647	-0.0015701	406.26007072381975	88.533	0.5885	88.74	88.667	89.256	0.20731					21	13	3	0	0	0	0.4196	1	8825	8825		21.702	7.0382	1	235530	+		12306	23574	8480	8488	14083	14083					0.09473829688124624
GPAGKRLL	8	Unmodified	_GPAGKRLL_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	406.261062	810.507572	-0.18703	-7.5984E-05	-9.116	-0.0037035	-9.303	-0.0037795	406.2573272219066	88.467	0.20287	88.535	88.352	88.555	0.068161	-0.096305	-0.0025378	NaN	21.702	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	349030	+		12307	23574	8480	8488							0.09473829688124624
GPAGKRLL	8	Unmodified	_GPAGKRLL_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.261062	810.507572	1.1722	0.00047623	-6.9018	-0.0028039	-5.7295	-0.0023277	406.2577441157747	88.748	0.45512	88.675	88.593	89.048	-0.07238	0.04388	-0.00073872	NaN	21.702	19	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	182650	+		12308	23574	8480	8488							0.09473829688124624
GPAGKRLL	8	Unmodified	_GPAGKRLL_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	406.261062	810.507572	1.6149	0.00065606	-4.8361	-0.0019647	-3.2213	-0.0013087	406.259005566135	88.126	0.80818	88.575	88.27	89.079	0.44893	-0.056666	0.00093965	NaN	21.702	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272660	+		12309	23574	8480	8488							0.09473829688124624
GPAGLHTHM	9	Oxidation (M)	_GPAGLHTHM(Oxidation (M))_		GPAGLHTHM(1)		GPAGLHTHM(42)	0	0	1			REV__nc|ENSG00000157927|Q96JH8-1|RADIL	REV__nc|ENSG00000157927|Q96JH8-1|RADIL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7234802246094	2	468.721444	935.428335	0.80557	0.00037759	3.1334	0.0014687	3.9389	0.0018463	468.7228502568121	90.007	1.4889	90.457	90.184	91.673	0.45058					91	38	4	0	0	0	0.67235	1	10689	10689		42.474	17.024	1	5665600	+		12310	20573	8481	8489	14084	14084		305			-0.04196185328305546
GPAGRPPR	8	Unmodified	_GPAGRPPR_					0	0	0			REV__ENST00000457594.2_7:74237150-74267816:-|nuORF	REV__ENST00000457594.2_7:74237150-74267816:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2328186035156	2	404.232836	806.45112	-0.18723	-7.5686E-05	0.58387	0.00023602	0.39664	0.00016033	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.87922	1	8559	8559		31.955	5.1588	1	4185000	+		12311	26971	8482	8490	14085	14085					0.04015201851461825
GPAGRVPAPKR	11	Unmodified	_GPAGRVPAPKR_					0	0	0			REV__ENST00000392485.2_1_17:74733241-74733367:-|nuORF	REV__ENST00000392485.2_1_17:74733241-74733367:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3320922851562	2	553.333082	1104.65161	-0.75754	-0.00041917	-0.44783	-0.0002478	-1.2054	-0.00066697	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.73893	1	10271	10271		24.519	0	1	4355400	+		12312	26021	8483	8491	14086	14086					0.10347051448275124
GPAKCAFK	8	Unmodified	_GPAKCAFK_					0	0	0			REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	411.2169494628906	2	411.220549	820.426544	0.94508	0.00038864	0.33673	0.00013847	1.2818	0.00052711	411.2196388652758	87.306	2.4467	87.232	85.148	87.595	-0.074005					79	56	3	0	0	0	0.80706	1	9002	9002		19.36	1.0356	1	231570	+		12313	17719	8484	8492	14087	14087					0.009148056537242155
GPALLRHN	8	Unmodified	_GPALLRHN_					0	0	0			REV__nc|ENSG00000149451|Q9BZ11-2|ADAM33	REV__nc|ENSG00000149451|Q9BZ11-2|ADAM33	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2729187011719	2	439.253769	876.492984	0.73954	0.00032485	0.09216	4.0482E-05	0.8317	0.00036533	439.25371097314815	106.03	0.74557	106.13	105.95	106.7	0.099007					23	17	2	0	0	0	0.4196	1	11408	11408		28.254	1.4582	1	119830	+		12314	20168	8485	8493	14088	14088					0.049797575399907146
GPALPARRP	9	Unmodified	_GPALPARRP_					0	0	0		ENST00000518942.1_1_8:52812176-52812332:+|nuORF	ENST00000518942.1_1_8:52812176-52812332:+|nuORF	ENST00000518942.1_1_8:52812176-52812332:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7830505371094	2	467.782693	933.550834	0.32859	0.00015371	-0.36613	-0.00017127	-0.037538	-1.756E-05	467.78242232923304	18.748	0.32783	18.271	18.077	18.404	-0.47694					10	6	2	0	0	0	0.7932	1	434	434		26.796	0	1	68045			12315	13126	8486	8494	14089	14089					0.08140019465417936
GPALRVARLR	10	Unmodified	_GPALRVARLR_					0	0	0		ENST00000405737.2_2_13:41556342-41635296:-|nuORF	ENST00000405737.2_2_13:41556342-41635296:-|nuORF	ENST00000405737.2_2_13:41556342-41635296:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.3422241210938	2	554.856724	1107.69889	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.867	1	16.867	16.367	17.367	0								0	0	0	0.45132	1	164	164		16.473	0	1				12316	11265	8487	8495	14090	14090					0.14935330719254125
GPANKHKPWI	10	Unmodified	_GPANKHKPWI_					0	0	0		nc|ENSG00000139182|Q9BQT9-2|CLSTN3;ENST00000538933.1_1_12:7285507-7286365:+|nuORF	nc|ENSG00000139182|Q9BQT9-2|CLSTN3	nc|ENSG00000139182|Q9BQT9-2|CLSTN3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.810546875	2	574.322183	1146.62981	0.2725	0.0001565	1.5085	0.00086639	1.781	0.0010229	574.3218105548154	33.946	0.10148	34.054	33.98	34.082	0.10829					7	4	2	0	0	0	0.37624	1	1683	1683		21.96	14.155	1	55524			12317	14956	8488	8496	14091	14091					0.06236246699700132
GPAPRQGR	8	Unmodified	_GPAPRQGR_					0	0	0			REV__ENST00000471851.1_1_7:5269292-5270538:+|nuORF	REV__ENST00000471851.1_1_7:5269292-5270538:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.1839904785156	2	419.735743	837.456933	-1.8562	-0.00077911	0.14011	5.881E-05	-1.7161	-0.0007203	419.73659502628584	87.029	0.65077	87.194	86.911	87.562	0.16473					22	14	2	0	0	0	0.4196	1	8569	8569		12.207	0	1	93313	+		12318	27242	8489	8497	14092	14092					0.031703003631378124
GPARIRAA	8	Unmodified	_GPARIRAA_					0	0	0			REV__ENST00000468640.1_1_6:71276643-71277231:+|nuORF	REV__ENST00000468640.1_1_6:71276643-71277231:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2478332519531	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.21	1	113.19	112.69	113.69	-0.024811								0	0	0	0.30125	1	12523	12523		20.482	4.8456	1		+		12319	27186	8490	8498	14093	14093					0.06959774885558545
GPARIRAA	8	Unmodified	_GPARIRAA_					0	0	0			REV__ENST00000468640.1_1_6:71276643-71277231:+|nuORF	REV__ENST00000468640.1_1_6:71276643-71277231:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.248291015625	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.81548	1	10318	10318		20.482	0	1	28266000	+		12320	27186	8490	8498	14094	14094					0.06959774885558545
GPARPGGQTG	10	Unmodified	_GPARPGGQTG_					0	0	0			REV__ENST00000527786.6_1_11:128563962-128628025:+|nuORF	REV__ENST00000527786.6_1_11:128563962-128628025:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2317810058594	2	449.230491	896.446428	-1.619	-0.00072729	1.9511	0.00087651	0.33216	0.00014922	449.23133844286133	83.319	3.7519	83.457	82.118	85.87	0.13811					166	86	3	0	0	0	0.86106	1	7952	7952		33.922	5.6674	1	160270	+		12321	28234	8491	8499	14095	14095					-0.005937270819458718
GPASPMEH	8	Unmodified	_GPASPMEH_					0	0	0			REV__ENST00000486303.1_1_21:46956310-46957840:-|nuORF	REV__ENST00000486303.1_1_21:46956310-46957840:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1839294433594	2	413.18162	824.348688	1.7261	0.00071319	1.9929	0.00082343	3.719	0.0015366	413.182822541021	99.146	0.82581	99.509	99.135	99.961	0.36292					79	20	5	0	0	0	0.86791	2	12013	12013;12050		28.254	2.8041	1	11472000	+		12322	27546	8492	8500	14096;14097	14096					-0.07051252002304409
GPATLLALCV	10	Unmodified	_GPATLLALCV_					0	0	0		ENSG00000105538|ENST00000222145|RASIP1	ENSG00000105538|ENST00000222145|RASIP1	ENSG00000105538|ENST00000222145|RASIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.277587890625	2	479.275521	956.536489	-0.098426	-4.7173E-05	3.9538	0.001895	3.8554	0.0018478	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.86305	2	8233	8081;8233		31.955	2.8053	1	1929800			12323	2225	8493	8501	14098;14099	14099					0.05648186202233774
GPATLLALCV	10	Unmodified	_GPATLLALCV_					0	0	0		ENSG00000105538|ENST00000222145|RASIP1	ENSG00000105538|ENST00000222145|RASIP1	ENSG00000105538|ENST00000222145|RASIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27740478515625	2	479.275521	956.536489	-0.098244	-4.7086E-05	4.0257	0.0019294	3.9274	0.0018823	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.86305	2	8499	8499;8729		31.955	4.0726	1	6799600			12324	2225	8493	8501	14100;14101	14100					0.05648186202233774
GPATLLALCV	10	Unmodified	_GPATLLALCV_					0	0	0		ENSG00000105538|ENST00000222145|RASIP1	ENSG00000105538|ENST00000222145|RASIP1	ENSG00000105538|ENST00000222145|RASIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27783203125	2	479.275521	956.536489	0.83201	0.00039876	3.0426	0.0014583	3.8747	0.001857	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.86201	2	8854	8854;8982		31.955	4.0726	1	7289200			12325	2225	8493	8501	14102;14103	14102					0.05648186202233774
GPATLLALCV	10	Unmodified	_GPATLLALCV_					0	0	0		ENSG00000105538|ENST00000222145|RASIP1	ENSG00000105538|ENST00000222145|RASIP1	ENSG00000105538|ENST00000222145|RASIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2774963378906	2	479.275521	956.536489	0.63867	0.0003061	3.2635	0.0015641	3.9021	0.0018702	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.86452	2	8234	8234;8446		30.504	1.3336	1	6593200			12326	2225	8493	8501	14104;14105	14104					0.05648186202233774
GPATMLFC	8	Unmodified	_GPATMLFC_					0	0	0			REV__ENST00000265070.6_1_5:32174239-32174446:-|nuORF	REV__ENST00000265070.6_1_5:32174239-32174446:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1915283203125	2	420.193142	838.371732	-0.017504	-7.3551E-06	-4.1267	-0.001734	-4.1442	-0.0017414	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.92774	1	11277	11277		49.211	13.593	1	4147200	+		12327	24487	8494	8502	14106	14106					-0.053919492091949905
GPATVLFRP	9	Unmodified	_GPATVLFRP_					0	0	0			REV__nc|ENSG00000156535|Q6YHK3-3|CD109	REV__nc|ENSG00000156535|Q6YHK3-3|CD109	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2777404785156	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.78536	1	8586	8586		29.15	1.0681	1	7438100	+		12328	20496	8495	8503	14107	14107					0.0643408151404401
GPAVKRVGG	9	Unmodified	_GPAVKRVGG_					0	0	0			REV__ENST00000392754.7_2_10:126431146-126431500:-|nuORF	REV__ENST00000392754.7_2_10:126431146-126431500:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7552490234375	2	420.756144	839.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.331	1	21.913	21.413	22.413	-0.41879								0	0	0	0.33676	1	892	892		18.324	3.6603	1		+		12329	26031	8496	8504	14108	14108					0.0715664168276362
GPAVPMAHPG	10	Unmodified	_GPAVPMAHPG_					0	0	0			REV__ENSG00000076201|ENST00000265562|PTPN23	REV__ENSG00000076201|ENST00000265562|PTPN23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2327575683594	2	467.234187	932.453822	-0.44519	-0.00020801	-1.2669	-0.00059192	-1.7121	-0.00079993	467.23348368031435	69.748	1.0482	70.132	69.909	70.957	0.38416					38	28	2	0	0	0	0.85976	1	7779	7779		35.201	1.6851	1	305600	+		12330	16723	8497	8505	14109	14109					-0.01510710805882809
GPCTFSTL	8	Unmodified	_GPCTFSTL_					0	0	0			REV__ENST00000029410.9_1_5:177036708-177037125:+|nuORF	REV__ENST00000029410.9_1_5:177036708-177037125:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1939697265625	2	413.194196	824.37384	0.36856	0.00015229	-1.5039	-0.00062141	-1.1354	-0.00046913	413.19353569569154	84.288	3.3037	84.723	83.664	86.967	0.43538					144	80	2	0	0	0	0.86288	2	9740	9716;9740		28.254	0	1	9340100	+		12331	24062	8498	8506	14110;14111	14111					-0.0453719719973833
GPCVECSL	8	Unmodified	_GPCVECSL_					0	0	0			REV__ENSG00000154803|ENST00000285071|FLCN	REV__ENSG00000154803|ENST00000285071|FLCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.170166015625	2	404.172407	806.330261	-1.5918	-0.00064335	-4.3613	-0.0017627	-5.953	-0.0024061	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.80706	1	7336	7336		19.36	2.8868	1	6183600	+		12332	20402	8499	8507	14112	14112					-0.08065129968520068
GPCVPEDH	8	Unmodified	_GPCVPEDH_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.18084716796875	2	427.179078	852.343602	1.8599	0.00079452	2.5741	0.0010996	4.434	0.0018941	427.1801609884198	102.54	0.57593	102.8	102.43	103	0.25452					35	15	4	0	0	0	0.89457	2	12452	12452;12459		37.028	1.8278	1	1638100			12333	15193	8500	8508	14113;14114	14113					-0.0884755586492929
GPCVPEDH	8	Unmodified	_GPCVPEDH_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.1807556152344	2	427.179078	852.343602	3.1244	0.0013347	0.28935	0.0001236	3.4137	0.0014583	427.1795879486706	102.53	0.57736	102.83	102.43	103.01	0.29865					34	13	4	0	0	0	0.89457	2	12486	12486;12509		54.765	12.29	1	1676500			12334	15193	8500	8508	14115;14116	14115					-0.0884755586492929
GPCVPEDH	8	Unmodified	_GPCVPEDH_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.1913757324219	2	427.179078	852.343602	2.8722	0.001227	1.9032	0.00081303	4.7755	0.00204	427.179868810817	101.78	0.56207	102.1	101.89	102.46	0.3251					22	12	2	0	0	0	0.4196	1	12404	12404		29.842	9.3597	1	390530			12335	15193	8500	8508	14117	14117					-0.0884755586492929
GPDAMPTH	8	Unmodified	_GPDAMPTH_					0	0	0		ENST00000468135.5_1_1:32542241-32568271:+|nuORF;ENSG00000121775|ENST00000336294|TMEM39B;nc|ENSG00000121775|Q9GZU3-4|TMEM39B;nc|ENSG00000121775|Q9GZU3-3|TMEM39B;ENST00000476968.5_1_1:32540652-32561345:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.18353271484375	2	413.18162	824.348688	2.248	0.00092885	-0.1615	-6.6729E-05	2.0865	0.00086212	413.1816917655686	98.102	1.3171	98.488	97.723	99.04	0.38548					84	31	4	0	0	0	0.9159	1	11819	11819		44.531	7.5026	1	2862500			12336	3198	8501	8509	14118	14118					-0.07051252002315778
GPDAMPTH	8	Unmodified	_GPDAMPTH_					0	0	0		ENST00000468135.5_1_1:32542241-32568271:+|nuORF;ENSG00000121775|ENST00000336294|TMEM39B;nc|ENSG00000121775|Q9GZU3-4|TMEM39B;nc|ENSG00000121775|Q9GZU3-3|TMEM39B;ENST00000476968.5_1_1:32540652-32561345:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1841735839844	2	413.18162	824.348688	2.34	0.00096685	1.7124	0.00070753	4.0524	0.0016744	413.18263814360023	99.934	1.4742	100.27	99.852	101.33	0.33294					93	36	4	0	0	0	0.9159	1	12089	12089		44.531	16.277	1	6186100			12337	3198	8501	8509	14119	14119					-0.07051252002315778
GPDAMPTH	8	Unmodified	_GPDAMPTH_					0	0	0		ENST00000468135.5_1_1:32542241-32568271:+|nuORF;ENSG00000121775|ENST00000336294|TMEM39B;nc|ENSG00000121775|Q9GZU3-4|TMEM39B;nc|ENSG00000121775|Q9GZU3-3|TMEM39B;ENST00000476968.5_1_1:32540652-32561345:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.18365478515625	2	413.18162	824.348688	1.3894	0.00057407	1.3241	0.0005471	2.7135	0.0011212	413.18241572168455	98.2	1.7988	98.577	97.389	99.188	0.37679					98	43	5	0	0	0	0.93529	2	11875	11875;11889		52.299	9.8247	1	2907700			12338	3198	8501	8509	14120;14121	14120					-0.07051252002315778
GPDAMPTH	8	Unmodified	_GPDAMPTH_					0	0	0		ENST00000468135.5_1_1:32542241-32568271:+|nuORF;ENSG00000121775|ENST00000336294|TMEM39B;nc|ENSG00000121775|Q9GZU3-4|TMEM39B;nc|ENSG00000121775|Q9GZU3-3|TMEM39B;ENST00000476968.5_1_1:32540652-32561345:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1837158203125	2	413.18162	824.348688	1.7261	0.00071319	1.9929	0.00082343	3.719	0.0015366	413.182822541021	99.146	0.82581	99.509	99.135	99.961	0.36292					79	20	5	0	0	0	0.91005	1	12001	12001		42.474	11.971	1	11472000			12339	3198	8501	8509	14122	14122					-0.07051252002315778
GPDAMPTH	8	Unmodified	_GPDAMPTH_					0	0	0		ENST00000468135.5_1_1:32542241-32568271:+|nuORF;ENSG00000121775|ENST00000336294|TMEM39B;nc|ENSG00000121775|Q9GZU3-4|TMEM39B;nc|ENSG00000121775|Q9GZU3-3|TMEM39B;ENST00000476968.5_1_1:32540652-32561345:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1839599609375	2	413.18162	824.348688	2.0036	0.00082786	1.8965	0.0007836	3.9001	0.0016115	413.18277054138287	99.966	1.3545	100.32	99.907	101.26	0.35072					93	33	4	0	0	0	0.88915	1	12133	12133		35.201	6.9464	1	6662300			12340	3198	8501	8509	14123	14123					-0.07051252002315778
GPDDTNSEY	9	Unmodified	_GPDDTNSEY_					0	0	0		nc|ENSG00000008735|Q13387-2|MAPK8IP2;ENSG00000008735|ENST00000329492|MAPK8IP2	nc|ENSG00000008735|Q13387-2|MAPK8IP2	nc|ENSG00000008735|Q13387-2|MAPK8IP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.1930847167969	2	499.190894	996.367234	0.87111	0.00043485	3.5749	0.0017846	4.446	0.0022194	499.19258535124294	96.514	1.2773	96.919	96.59	97.867	0.40498					47	30	2	0	0	0	0.67345	1	11570	11570		42.396	6.7778	1	570350			12341	750	8502	8510	14124	14124					-0.13109463617411166
GPDLLLTL	8	Unmodified	_GPDLLLTL_					0	0	0		nc|ENSG00000185176|A6NM10|AQP12B;ENSG00000184945|ENST00000337801|AQP12A;ENSG00000185176|ENST00000407834|AQP12B	nc|ENSG00000185176|A6NM10|AQP12B	nc|ENSG00000185176|A6NM10|AQP12B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.25408935546875	2	421.255111	840.49567	0.67687	0.00028514	-3.3489	-0.0014107	-2.672	-0.0011256	421.25351698068755	84.328	1.4775	84.259	83.718	85.196	-0.069313					81	33	3	0	0	0	0.85277	1	8666	8666		25.45	3.4903	1	949480			12342	7657	8503	8511	14125	14125					0.06904168154278523
GPDPRVVL	8	Unmodified	_GPDPRVVL_					0	0	0		ENST00000517876.5_1_5:154255011-154255200:+|nuORF	ENST00000517876.5_1_5:154255011-154255200:+|nuORF	ENST00000517876.5_1_5:154255011-154255200:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.75006103515625	2	426.750527	851.486502	0.17615	7.5171E-05	-0.60909	-0.00025993	-0.43295	-0.00018476	426.7498083241824	79.997	1.9435	80.524	79.423	81.366	0.52677					115	45	4	0	0	0	0.91472	1	9204	9204		44.117	5.3107	1	766440			12343	13109	8504	8512	14126	14126					0.054818195886127796
GPDRGYVF	8	Unmodified	_GPDRGYVF_					0	0	0		nc|ENSG00000176095|Q92551-2|IP6K1;ENSG00000176095|ENST00000321599|IP6K1	nc|ENSG00000176095|Q92551-2|IP6K1	nc|ENSG00000176095|Q92551-2|IP6K1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3011474609375	2	455.72451	909.434466	-0.70162	-0.00031975	1.7507	0.00079784	1.0491	0.00047809	455.7251477136582	32.496	0.51635	32.622	32.375	32.891	0.12642					17	11	2	0	0	0	0.4196	1	2311	2311		60.294	19.721	1	54032			12344	7055	8505	8513	14127	14127					-0.023873438251371226
GPDRKALGP	9	Unmodified	_GPDRKALGP_					0	0	0		ENSG00000092067|ENST00000206513|CEBPE	ENSG00000092067|ENST00000206513|CEBPE	ENSG00000092067|ENST00000206513|CEBPE	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.26605224609375	2	455.758884	909.503215	-0.92077	-0.00041965	3.574	0.0016289	2.6532	0.0012092	455.7602974544515	38.722	0.75236	39.244	38.83	39.582	0.52235					24	17	2	0	0	0	0.20789	1	3183	3183		40.778	0	1	232350			12345	1689	8506	8514	14128	14128					0.04484320474557535
GPDRKALGP	9	Unmodified	_GPDRKALGP_					0	0	0		ENSG00000092067|ENST00000206513|CEBPE	ENSG00000092067|ENST00000206513|CEBPE	ENSG00000092067|ENST00000206513|CEBPE	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	455.758884	909.503215	-1.3977	-0.00063699	2.8252	0.0012876	1.4275	0.00065062	455.7602568654924	38.875	0.33556	39.216	39.065	39.401	0.34187	-0.013871	-0.00055539	NaN	47.657	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105100			12346	1689	8506	8514							0.04484320474557535
GPDSTGHH	8	Unmodified	_GPDSTGHH_					0	0	0			REV__ENST00000481065.5_1_3:114014461-114014539:+|nuORF	REV__ENST00000481065.5_1_3:114014461-114014539:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.17022705078125	2	404.172641	806.33073	-1.8319	-0.00074042	-4.3741	-0.0017679	-6.2061	-0.0025083	404.17089024317255	78.364	3.0861	78.491	77.697	80.783	0.12695					160	99	2	0	0	0	0.86288	3	7367	7367;7376;7394		42.474	10.998	1	7642900	+		12347	27429	8507	8515	14129;14130;14131	14129					-0.08018250932809678
GPDVIPLP	8	Unmodified	_GPDVIPLP_					0	0	0		ENST00000460871.1_1_9:71990729-72006671:+|nuORF;nc|ENSG00000135063|Q15884|ENTREP1;ENSG00000135063|ENST00000303068|ENTREP1;nc|ENSG00000135063|Q15884-1|ENTREP1	ENST00000460871.1_1_9:71990729-72006671:+|nuORF	ENST00000460871.1_1_9:71990729-72006671:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.23248291015625	2	404.234179	806.453805	-1.2631	-0.0005106	-2.2404	-0.00090563	-3.5035	-0.0014162	404.2330856183434	82.529	2.4032	82.529	81.258	83.662	0					126	65	3	0	0	0	0.86791	1	7723	7723		28.254	1.4582	1	248830			12348	3979	8508	8516	14132	14132					0.04283612465758324
GPEDEAAH	8	Unmodified	_GPEDEAAH_					0	0	0		nc|ENSG00000103152|P29372-5|MPG;nc|ENSG00000103152|P29372-2|MPG;ENSG00000103152|ENST00000356432|MPG;nc|ENSG00000103152|P29372|MPG	nc|ENSG00000103152|P29372-5|MPG	nc|ENSG00000103152|P29372-5|MPG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.19378662109375	2	413.172307	824.330061	0.32588	0.00013465	4.2157	0.0017418	4.5416	0.0018765	413.17454016462807	84.188	0.15797	84.623	84.547	84.705	0.43537					5	3	2	0	0	0	0.4196	1	9789	9789		35.201	14.719	1	50517			12349	2056	8509	8517	14133	14133					-0.08913090372527677
GPEDVLTI	8	Unmodified	_GPEDVLTI_					0	0	0		ENST00000589111.5_1_19:39359746-39361880:-|nuORF;nc|ENSG00000187994|Q6ZS11-2|RINL;ENSG00000187994|ENST00000591812|RINL	ENST00000589111.5_1_19:39359746-39361880:-|nuORF	ENST00000589111.5_1_19:39359746-39361880:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2281494140625	2	422.226551	842.438549	0.40511	0.00017105	3.1892	0.0013466	3.5943	0.0015176	422.2277865836404	64.332	1.1229	64.456	64.031	65.154	0.12397					101	41	4	0	0	0	0.85277	1	5646	5646		25.45	3.7478	1	502100			12350	7897	8510	8518	14134	14134					0.011027008779137759
GPEEVRKHRSG	11	Unmodified	_GPEEVRKHRSG_					0	0	0			REV__ENST00000579323.5_2_17:71161213-71164112:+|nuORF	REV__ENST00000579323.5_2_17:71161213-71164112:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3319702148438	2	626.331267	1250.64798	0.1526	9.5579E-05	2.4983	0.0015648	2.6509	0.0016604	626.3326782105968	42.989	0.76316	42.96	42.637	43.4	-0.029461					40	17	3	0	0	0	0.33864	1	3248	3248		63.426	22	1	443750	+		12351	25415	8511	8519	14135	14135					0.03268336883752454
GPEFWRII	8	Unmodified	_GPEFWRII_					0	0	0		nc|ENSG00000116678|P48357-2|LEPR;nc|ENSG00000116678|P48357-4|LEPR;nc|ENSG00000116678|P48357-3|LEPR;ENSG00000116678|ENST00000349533|LEPR;nc|ENSG00000116678|P48357-5|LEPR	nc|ENSG00000116678|P48357-2|LEPR	nc|ENSG00000116678|P48357-2|LEPR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7861022949219	2	509.279452	1016.54435	2.0824	0.0010605	3.7656	0.0019178	5.848	0.0029783	509.7840479845515	107.72	0.1761	107.83	107.73	107.9	0.10395					7	5	2	0	0	0	0.884	1	13138	13138		33.516	1.9858	1	253950			12352	2932	8512	8520	14136	14136					0.03674081514043337
GPELKQLRQQL	11	Unmodified	_GPELKQLRQQL_					0	0	0			REV__nc|ENSG00000100503|Q8N4C6-5|NIN	REV__nc|ENSG00000100503|Q8N4C6-5|NIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2572021484375	3	437.257738	1308.75138	-1.4866	-0.00065002	0.58687	0.00025661	-0.89971	-0.00039341	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.74022	1	10282	10282		24.232	0.85391	1	981430	+		12353	29738	8513	8521	14137	14137					0.10935824271541605
GPELKQLRQQL	11	Unmodified	_GPELKQLRQQL_					0	0	0			REV__nc|ENSG00000100503|Q8N4C6-5|NIN	REV__nc|ENSG00000100503|Q8N4C6-5|NIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2569580078125	3	437.257738	1308.75138	1.9496	0.00085247	-2.6885	-0.0011755	-0.73887	-0.00032308	437.25651996050084	98.928	2.561	99.291	98.354	100.91	0.36292					151	63	3	0	0	0	0.73621	2	11949	11938;11949		25.126	5.5448	1	662950	+		12354	29738	8513	8521	14138;14139	14139					0.10935824271541605
GPEMGELH	8	Unmodified	_GPEMGELH_					0	0	0			REV__nc|ENSG00000139220|O75334-6|PPFIA2	REV__nc|ENSG00000139220|O75334-6|PPFIA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.19744873046875	2	435.194728	868.374903	2.3747	0.0010334	2.3102	0.0010054	4.6849	0.0020388	435.195585607861	100.17	1.1497	100.52	100.11	101.26	0.34591					48	28	3	0	0	0	0.91005	1	12160	12160		42.474	1.9018	1	600290	+		12355	19527	8514	8522	14140	14140					-0.06454982830814515
GPEPEPEP	8	Unmodified	_GPEPEPEP_					0	0	0		ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.1802062988281	2	426.192708	850.370863	1.704	0.00072625	-4.4816	-0.00191	-2.7776	-0.0011838	426.1906151248855	98.361	0.61664	98.722	98.399	99.016	0.36137					25	14	2	0	0	0	0.4196	1	11882	11882		23.042	4.7181	1	260670			12356	2626	8515	8523	14141	14141					-0.06030749052899864
GPETSTDT	8	Unmodified	_GPETSTDT_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.17034912109375	2	404.171973	806.329392	-1.5918	-0.00064335	-3.287	-0.0013285	-4.8787	-0.0019719	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.84341	1	7430	7430		24.203	2.5004	1	6183600	+		12357	22442	8516	8524	14142	14142					-0.08151929812231629
GPFSQGLGLIA	11	Unmodified	_GPFSQGLGLIA_					0	0	0			REV__ENST00000318443.9_1_15:74006480-74006705:+|nuORF	REV__ENST00000318443.9_1_15:74006480-74006705:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2930908203125	2	530.295299	1058.57605	-1.5163	-0.00080409	-2.0724	-0.001099	-3.5887	-0.0019031	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.72228	1	8951	8951		27.882	2.3082	1	1686700	+		12358	24974	8517	8525	14143	14143					0.049100294773325004
GPGAAPGGAVG	11	Unmodified	_GPGAAPGGAVG_					0	0	0			REV__ENSG00000155287|ENST00000370495|SLC25A28	REV__ENSG00000155287|ENST00000370495|SLC25A28	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2485656738281	2	405.70886	809.403166	-0.18692	-7.5834E-05	-0.5345	-0.00021685	-0.72142	-0.00029269	405.7083045453209	89.704	0.52504	89.773	89.514	90.039	0.068703					17	11	2	0	0	0	0.17378	1	9167	9167		24.203	0	1	65382	+		12359	20421	8518	8526	14144	14144					-0.009159168592304923
GPGAFAGLGG	10	Unmodified	_GPGAFAGLGG_					0	0	0		ENSG00000182704|ENST00000333090|TSKU;chr11:76792769-76795609|22|14.36|0.33|5.45|+|ENST00000527881|TSKU,TSKU	ENSG00000182704|ENST00000333090|TSKU	ENSG00000182704|ENST00000333090|TSKU	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.2049560546875	2	402.205953	802.397353	-1.7943	-0.00072169	1.1438	0.00046004	-0.65054	-0.00026165	402.20636046917366	98.897	1.8674	99.119	98.298	100.17	0.22262					109	43	3	0	0	0	0.85976	1	10307	10307		35.201	8.4046	1	737490			12360	108	8519	8527	14145	14145					-0.011750153708931066
GPGAFAGLGG	10	Unmodified	_GPGAFAGLGG_					0	0	0		ENSG00000182704|ENST00000333090|TSKU;chr11:76792769-76795609|22|14.36|0.33|5.45|+|ENST00000527881|TSKU,TSKU	ENSG00000182704|ENST00000333090|TSKU	ENSG00000182704|ENST00000333090|TSKU	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	402.205953	802.397353	-1.9291	-0.0007759	1.3554	0.00054515	-0.57373	-0.00023076	402.20644100381224	99.061	2.3709	99.247	98.234	100.6	0.18581	0.078246	0.00082662	NaN	35.201	108	54	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	541830			12361	108	8519	8527							-0.011750153708931066
GPGAPRLLPP	10	Unmodified	_GPGAPRLLPP_					0	0	0		ENSG00000101204|ENST00000370263|CHRNA4	ENSG00000101204|ENST00000370263|CHRNA4	ENSG00000101204|ENST00000370263|CHRNA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.790283203125	2	487.792727	973.5709	-0.48923	-0.00023864	-3.7823	-0.001845	-4.2716	-0.0020836	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.86452	1	9964	9964		30.504	1.3541	1	1599600			12362	1913	8520	8528	14146	14146					0.08305770405377189
GPGASPPPVLL	11	Unmodified	_GPGASPPPVLL_					0	0	0			REV__ENSG00000186790|ENST00000335071|FOXE3	REV__ENSG00000186790|ENST00000335071|FOXE3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.81396484375	2	502.792392	1003.57023	-0.061811	-3.1078E-05	-4.4737	-0.0022493	-4.5355	-0.0022804	502.79058582487386	97.646	0.58756	97.703	97.507	98.094	0.056831					19	13	2	0	0	0	0.16498	1	10323	10323		51.335	8.861	1	50134	+		12363	22879	8521	8529	14147	14147					0.06858930965665877
GPGGGGQAHGG	11	Unmodified	_GPGGGGQAHGG_					0	0	0		ENSG00000111752|ENST00000544916|PHC1;ENST00000433847.2_1_12:9067399-9086462:+|nuORF;ENST00000539928.1_1_12:9083252-9086563:+|nuORF	ENSG00000111752|ENST00000544916|PHC1	ENSG00000111752|ENST00000544916|PHC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.19146728515625	2	426.191365	850.368178	1.2211	0.00052043	-1.3488	-0.00057486	-0.12772	-5.4433E-05	426.1908077193733	97.101	1.266	97.492	97.115	98.381	0.39065					86	30	4	0	0	0	0.67493	1	11714	11714		35.618	0	1	6288000			12364	2610	8522	8530	14148	14148					-0.06299159667184995
GPGGLIKFVT	10	Unmodified	_GPGGLIKFVT_					0	0	0		chr12:18143293-18198401|18|114.39|0.0|23.45|-|1|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|10;chr12:18143293-18198304|14|75.14|0.0|22.84|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198304,18203231|RERGL,None|10;chr12:18143293-18197336|19|33.89|0.0|21.69|-|1|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|10;chr12:18088956-18198401|14|92.57|0.0|23.14|-|1|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|10;chr12:18088956-18197336|15|76.93|0.0|22.88|-|1|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|10	chr12:18143293-18198401|18|114.39|0.0|23.45|-|1|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|10	chr12:18143293-18198401|18|114.39|0.0|23.45|-|1|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7936706542969	2	494.794935	987.575317	0.53507	0.00026475	-4.2973	-0.0021263	-3.7622	-0.0018615	494.7926397196607	26.556	0.66258	26.601	26.257	26.92	0.045507					37	18	3	0	0	0	0.82886	1	1135	1135		37.812	0.30334	1	91230			12365	120	8523	8531	14149	14149					0.08103234828286077
GPGGLLLLGF	10	Unmodified	_GPGGLLLLGF_					0	0	0			REV__ENST00000476534.1_1_2:97269891-97271381:-|nuORF	REV__ENST00000476534.1_1_2:97269891-97271381:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2763977050781	2	472.284203	942.553853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.502	1	34.447	33.947	34.947	-0.055149								0	0	0	0.45132	1	1745	1745		26.796	1.3459	1		+		12366	27337	8524	8532	14150	14150					0.0802784979957778
GPGGPRGIVGG	11	Unmodified	_GPGGPRGIVGG_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2;chr4:75673298-75673364|52|10.21|0.42|4.59|-|ENST00000677201|G3BP2,G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	462.2561340332031	2	462.256508	922.498464	-1.6815	-0.00077729	-0.11741	-5.4273E-05	-1.7989	-0.00083157	462.25621077069724	50.777	1.0795	50.777	50.38	51.46	0					48	27	3	0	0	0	0.61774	1	4086	4086		42.396	5.9494	1	317310			12367	432	8525	8533	14151	14151					0.03411436331816731
GPGGRQDH	8	Unmodified	_GPGGRQDH_					0	0	0		ENSG00000100154|ENST00000397906|TTC28	ENSG00000100154|ENST00000397906|TTC28	ENSG00000100154|ENST00000397906|TTC28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.1899108886719	2	412.193908	822.373263	1.325	0.00054615	-1.0298	-0.00042446	0.29521	0.00012168	412.1933865140003	98.051	0.82419	98.428	98.123	98.947	0.37679					37	19	2	0	0	0	0.90465	1	11836	11836		40.573	7.057	1	651050			12368	1803	8526	8534	14152	14152					-0.04502855804571482
GPGGSHGRD	9	Unmodified	_GPGGSHGRD_					0	0	0		chr19:54429379-54430550|17|17.47|0.51|5.09|+|2|TTYH1,TTYH1|1	chr19:54429379-54430550|17|17.47|0.51|5.09|+|2|TTYH1,TTYH1|1	chr19:54429379-54430550|17|17.47|0.51|5.09|+|2|TTYH1,TTYH1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.1918029785156	2	420.191365	838.368178	1.7374	0.00073004	-2.4837	-0.0010436	-0.7463	-0.00031359	420.1905572526673	93.928	4.8779	94.369	91.96	96.838	0.44099					240	120	3	0	0	0	0.58151	1	11242	11242		47.916	1.9636	1	4179400			12369	293	8527	8535	14153	14153					-0.05747159667180313
GPGHTPPH	8	Unmodified	_GPGHTPPH_					0	0	0			REV__ENST00000215793.12_1_22:30731513-30731692:-|nuORF	REV__ENST00000215793.12_1_22:30731513-30731692:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1956787109375	2	400.195919	798.377286	1.0095	0.00040398	-2.8721	-0.0011494	-1.8626	-0.00074542	400.19508038720977	81.709	1.4923	82.135	81.837	83.33	0.42646					93	36	4	0	0	0	0.90024	2	9427	9427;9439		39.021	1.8624	1	32993000	+		12370	24116	8528	8536	14154;14155	14154					-0.029967663108777742
GPGHTPPH	8	Unmodified	_GPGHTPPH_					0	0	0			REV__ENST00000215793.12_1_22:30731513-30731692:-|nuORF	REV__ENST00000215793.12_1_22:30731513-30731692:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.1952209472656	2	400.195919	798.377286	-0.12707	-5.0854E-05	-2.0351	-0.00081445	-2.1622	-0.0008653	400.19544340069075	81.631	1.4124	82.131	81.786	83.198	0.49966					81	34	4	0	0	0	0.90024	1	9460	9460		39.021	0	1	35228000	+		12371	24116	8528	8536	14156	14156					-0.029967663108777742
GPGLGRRLA	9	Unmodified	_GPGLGRRLA_					0	0	0		ENST00000438934.5_2_22:18958062-18975611:+|nuORF;ENST00000440005.6_2_22:18958062-18978324:+|nuORF	ENST00000438934.5_2_22:18958062-18975611:+|nuORF	ENST00000438934.5_2_22:18958062-18975611:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.7718505859375	2	448.774868	895.535184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.388	1	41.395	40.895	41.895	0.0065727								0	0	0	0.30053	1	3045	3045		30.504	5.0535	1				12372	11758	8529	8537	14157	14157					0.08323732948372253
GPGLGSHLA	9	Unmodified	_GPGLGSHLA_					0	0	0		ENST00000590520.5_1_17:40345076-40346292:-|nuORF	ENST00000590520.5_1_17:40345076-40346292:-|nuORF	ENST00000590520.5_1_17:40345076-40346292:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.7191162109375	2	404.719227	807.423902	0.49648	0.00020093	-1.5241	-0.00061684	-1.0276	-0.0004159	404.7184769182728	74.42	0.59122	74.553	74.306	74.897	0.13207					27	19	2	0	0	0	0.76996	1	6880	6880		33.516	0	1	61768			12373	14260	8530	8538	14158	14158					0.012486735204220167
GPGLGSHLA	9	Unmodified	_GPGLGSHLA_					0	0	0		ENST00000590520.5_1_17:40345076-40346292:-|nuORF	ENST00000590520.5_1_17:40345076-40346292:-|nuORF	ENST00000590520.5_1_17:40345076-40346292:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	404.719227	807.423902	-0.43143	-0.00017461	-0.51319	-0.0002077	-0.94461	-0.0003823	404.7186609411621	74.727	0.60133	74.683	74.361	74.963	-0.043877	0.067052	-0.00035262	NaN	33.516	23	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47527			12374	14260	8530	8538							0.012486735204220167
GPGLGSHLA	9	Unmodified	_GPGLGSHLA_					0	0	0		ENST00000590520.5_1_17:40345076-40346292:-|nuORF	ENST00000590520.5_1_17:40345076-40346292:-|nuORF	ENST00000590520.5_1_17:40345076-40346292:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	404.719227	807.423902	-1.8395	-0.00074446	0.9924	0.00040164	-0.84706	-0.00034282	404.7193883657077	74.466	0.53996	74.593	74.303	74.843	0.12711	-0.023466	0.00086606	NaN	33.516	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67450			12375	14260	8530	8538							0.012486735204220167
GPGNYVHP	8	Unmodified	_GPGNYVHP_					0	0	0		nc|ENSG00000162105|Q9UPX8-4|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;ENSG00000162105|ENST00000601538|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.7041320800781	2	420.703577	839.392602	0.14834	6.2408E-05	0.63018	0.00026512	0.77852	0.00032753	420.7036161426667	35.865	0.60511	35.968	35.648	36.253	0.10306					33	19	2	0	0	0	0.89457	1	1942	1942		37.028	1.8278	1	88341			12376	5669	8531	8539	14159	14159					-0.033518995136660124
GPGPGRRK	8	Unmodified	_GPGPGRRK_					0	0	0		ENST00000590966.1_1_17:68165378-68165540:-|nuORF	ENST00000590966.1_1_17:68165378-68165540:-|nuORF	ENST00000590966.1_1_17:68165378-68165540:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.74615478515625	2	412.746111	823.477669	0.7641	0.00031538	-0.086078	-3.5528E-05	0.67802	0.00027985	412.7458735732829	85.139	3.1869	85.067	83.891	87.078	-0.07196					136	73	4	0	0	0	0.81548	1	8701	8701		20.482	0	1	1556000			12377	14267	8532	8540	14160	14160					0.058868907427950035
GPGPGRRK	8	Unmodified	_GPGPGRRK_					0	0	0		ENST00000590966.1_1_17:68165378-68165540:-|nuORF	ENST00000590966.1_1_17:68165378-68165540:-|nuORF	ENST00000590966.1_1_17:68165378-68165540:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7461242675781	2	412.746111	823.477669	2.8762	0.0011871	-2.3909	-0.00098683	0.4853	0.00020031	412.7450091002515	84.946	2.9822	85.005	83.717	86.699	0.05925					127	68	4	0	0	0	0.81548	1	8593	8593		20.482	0	1	1583700			12378	14267	8532	8540	14161	14161					0.058868907427950035
GPGPLTRW	8	Unmodified	_GPGPLTRW_					0	0	0			REV__chr19:39505451-39507039|54|180.33|0.7|8.02|+|1|DLL3,DLL3|1	REV__chr19:39505451-39507039|54|180.33|0.7|8.02|+|1|DLL3,DLL3|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24029541015625	2	442.24287	882.471186	-1.2774	-0.00056493	-3.033	-0.0013413	-4.3104	-0.0019063	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.86791	1	7784	7784		28.254	1.4582	1	716910	+		12379	15701	8533	8541	14162	14162					0.025249527914184
GPGPPWLRQSL	11	Unmodified	_GPGPPWLRQSL_					0	0	0			REV__ENST00000222248.3_1_19:17988859-17994831:+|nuORF	REV__ENST00000222248.3_1_19:17988859-17994831:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2468566894531	3	403.224257	1206.65094	-0.18597	-7.4988E-05	-0.65069	-0.00026238	-0.83666	-0.00033736	403.2240265146302	104.75	0.2842	104.73	104.5	104.78	-0.014809					8	6	2	0	0	0	0.1751	1	11284	11284		22.562	0	1	66892	+		12380	24160	8534	8542	14163	14163					0.05588212008547089
GPGPQISKR	9	Unmodified	_GPGPQISKR_					0	0	0			REV__ENST00000478232.1_1_1:28862693-28863283:+|nuORF	REV__ENST00000478232.1_1_1:28862693-28863283:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.27203369140625	2	470.272158	938.529764	-0.95275	-0.00044805	0.77303	0.00036353	-0.17972	-8.4519E-05	470.2725133090264	92.093	2.8487	92.314	91.222	94.07	0.22157					155	67	4	0	0	0	0.7932	1	9295	9295		21.96	1.013	1	1872200	+		12381	27375	8535	8543	14164	14164					0.05804009365908769
GPGPTLRTG	9	Unmodified	_GPGPTLRTG_					0	0	0			REV__ENST00000564731.5_1_16:46761123-46772038:-|nuORF	REV__ENST00000564731.5_1_16:46761123-46772038:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.26141357421875	2	428.237784	854.461016	2.6387	0.00113	0.34924	0.00014956	2.988	0.0012796	428.2378969044533	90.489	0.2085	90.536	90.347	90.555	0.046448					5	4	2	0	0	0	0.20789	1	9377	9377		35.618	12.576	1	79139	+		12382	19640	8536	8544	14165	14165					0.027963450661900424
GPGQWGEGPL	10	Unmodified	_GPGQWGEGPL_					0	0	0			REV__ENST00000582287.6_1_19:18545725-18546537:-|nuORF	REV__ENST00000582287.6_1_19:18545725-18546537:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	499.23681640625	2	499.240524	996.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.493	1	31.442	30.942	31.942	-0.051031								0	0	0	0.45132	1	1786	1786		32.812	0.85756	1		+		12383	29059	8537	8545	14166	14166					-0.03187976141998661
GPGRCNSH	8	Unmodified	_GPGRCNSH_					0	0	0		ENST00000198767.10_1_16:15154396-15154894:-|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.1829833984375	2	414.182486	826.350419	0.50275	0.00020823	1.183	0.00048997	1.6857	0.0006982	414.18299345083557	80.376	1.043	80.798	80.427	81.47	0.4215					50	24	3	0	0	0	0.91472	1	9215	9215		44.117	10.624	1	1440800			12384	26952	8538	8546	14167	14167					-0.06970198193698707
GPGRCNSH	8	Unmodified	_GPGRCNSH_					0	0	0		ENST00000198767.10_1_16:15154396-15154894:-|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	414.182486	826.350419	-1.2793	-0.00052986	3.0691	0.0012712	1.7898	0.00074132	414.18362976455035	81.348	1.1198	81.348	80.958	82.077	0	0.20827	0.00119	NaN	44.117	51	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93080			12385	26952	8538	8546							-0.06970198193698707
GPGRCNSH	8	Unmodified	_GPGRCNSH_					0	0	0		ENST00000198767.10_1_16:15154396-15154894:-|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	414.182486	826.350419	-0.1875	-7.7659E-05	2.1578	0.00089373	1.9703	0.00081607	414.18327740780745	81.133	1.2944	81.197	80.88	82.174	0.064384	0.057738	0.00043509	NaN	44.117	45	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	286130			12386	26952	8538	8546							-0.06970198193698707
GPGRCNSH	8	Unmodified	_GPGRCNSH_					0	0	0		ENST00000198767.10_1_16:15154396-15154894:-|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	414.182486	826.350419	0.32554	0.00013483	1.6164	0.00066949	1.942	0.00080432	414.18304037275385	81.346	1.1977	81.287	80.915	82.112	-0.059692	0.14685	-1.3379E-05	NaN	44.117	40	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	346730			12387	26952	8538	8546							-0.06970198193698707
GPGRCNSH	8	Unmodified	_GPGRCNSH_					0	0	0		ENST00000198767.10_1_16:15154396-15154894:-|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	414.182486	826.350419	2.639	0.001093	-0.93749	-0.00038829	1.7016	0.00070475	414.1820121119682	81.133	1.34	81.189	80.82	82.16	0.055916	0.049195	-0.0021289	NaN	44.117	56	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	295250			12388	26952	8538	8546							-0.06970198193698707
GPGRCNSH	8	Unmodified	_GPGRCNSH_					0	0	0		ENST00000198767.10_1_16:15154396-15154894:-|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	414.182486	826.350419	-1.8254	-0.00075605	3.1105	0.0012883	1.2851	0.00053228	414.1839809621798	80.936	1.0633	81.073	80.705	81.769	0.13702	-0.066307	0.0012243	NaN	44.117	47	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	320600			12389	26952	8538	8546							-0.06970198193698707
GPGRCNSH	8	Unmodified	_GPGRCNSH_					0	0	0		ENST00000198767.10_1_16:15154396-15154894:-|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	414.182486	826.350419	0.55568	0.00023015	0.95706	0.0003964	1.5127	0.00062655	414.1829884158764	80.962	1.1124	81.105	80.693	81.805	0.14352	-0.034378	-0.00055956	NaN	44.117	54	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	321120			12390	26952	8538	8546							-0.06970198193698707
GPGRCNSH	8	Unmodified	_GPGRCNSH_					0	0	0		ENST00000198767.10_1_16:15154396-15154894:-|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	414.182486	826.350419	-1.6646	-0.00068947	2.6439	0.0010951	0.97929	0.0004056	414.1838104307639	81.015	1.0319	81.12	80.791	81.823	0.10526	-0.019205	0.00083778	NaN	44.117	44	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272830			12391	26952	8538	8546							-0.06970198193698707
GPGRMREH	8	Unmodified	_GPGRMREH_					0	0	0		ENSG00000163013|ENST00000520530|FBXO41	ENSG00000163013|ENST00000520530|FBXO41	ENSG00000163013|ENST00000520530|FBXO41	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7693176269531	2	470.23251	938.450468	0.2766	0.00013007	3.5985	0.0016922	3.8751	0.0018222	470.2331563549508	50.298	0.2388	51.143	50.974	51.213	0.84501					7	5	2	0	0	0	0.4196	1	4963	4963		57.811	13.28	1	82325			12392	5757	8539	8547	14168	14168					-0.021219608598926243
GPGTLARKN	9	Unmodified	_GPGTLARKN_					0	0	0		ENST00000452284.1_1_22:21356738-21362956:+|nuORF;ENST00000436079.1_1_22:21356738-21363657:+|nuORF;ENST00000429962.1_1_22:21356738-21357321:+|nuORF	ENST00000452284.1_1_22:21356738-21362956:+|nuORF	ENST00000452284.1_1_22:21356738-21362956:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2640075683594	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.76255	1	8135	8135		35.618	3.6634	1	4511100			12393	11619	8540	8548	14169	14169					0.05435722848858404
GPHHLLSLI	9	Unmodified	_GPHHLLSLI_					0	0	0			REV__ENST00000397265.7_1_12:674551-719530:-|nuORF	REV__ENST00000397265.7_1_12:674551-719530:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7919006347656	2	493.792727	985.5709	-1.0082	-0.00049786	-0.36057	-0.00017804	-1.3688	-0.0006759	493.79239689427686	91.796	2.3688	92.259	91.807	94.176	0.46249					119	55	4	0	0	0	0.58151	1	10959	10959		47.916	5.5195	1	3049900	+		12394	26163	8541	8549	14170	14170					0.07753770405395244
GPHKKGYHT	9	Unmodified	_GPHKKGYHT_					0	0	0			REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.7698974609375	2	512.769783	1023.52501	0.15873	8.1392E-05	-0.26285	-0.00013478	-0.10412	-5.3389E-05	512.76945041	30.19	0.77853	30.175	29.843	30.622	-0.015167					37	18	3	0	0	0	0.76764	1	1585	1585		34.173	1.3601	1	129150	+		12395	20098	8542	8550	14171	14171					0.014191252231285034
GPHPASPH	8	Unmodified	_GPHPASPH_					0	0	0		ENSG00000197993|ENST00000355265|KEL;ENST00000479768.6_1_7:142643674-142659293:-|nuORF;ENST00000494148.1_1_7:142651443-142655450:-|nuORF	ENSG00000197993|ENST00000355265|KEL	ENSG00000197993|ENST00000355265|KEL	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.1982727050781	2	400.195919	798.377286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.162	1	83.327	82.827	83.827	0.1651								0	0	0	0.29353	1	8036	8036		28.254	1.4582	1				12396	8224	8543	8551	14172	14172					-0.029967663108664055
GPHRGRVALL	10	Unmodified	_GPHRGRVALL_					0	0	0			REV__ENSG00000166183|ENST00000551177|ASPG	REV__ENSG00000166183|ENST00000551177|ASPG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.326416015625	2	538.327799	1074.64105	-0.51594	-0.00027775	-0.036562	-1.9682E-05	-0.5525	-0.00029743	538.3279060081551	104.84	1.38	104.84	104.13	105.51	0					86	33	3	0	0	0	0.86763	1	10877	10877		26.693	0	1	591240	+		12397	21264	8544	8552	14173	14173					0.10671068793840277
GPICPDCQ	8	Unmodified	_GPICPDCQ_					0	0	0			REV__ENST00000541233.1_1_12:6554564-6560555:+|nuORF	REV__ENST00000541233.1_1_12:6554564-6560555:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.6702880859375	2	416.670031	831.32551	0.30905	0.00012877	-0.92734	-0.0003864	-0.6183	-0.00025763	416.6699046010402	94.95	1.1346	95.37	94.933	96.068	0.41964					61	27	4	0	0	0	0.91005	1	11398	11398		42.474	3.6683	1	892570	+		12398	19522	8545	8553	14174	14174					-0.09690014111299661
GPICPDCQ	8	Unmodified	_GPICPDCQ_					0	0	0			REV__ENST00000541233.1_1_12:6554564-6560555:+|nuORF	REV__ENST00000541233.1_1_12:6554564-6560555:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	416.670031	831.32551	0.30905	0.00012877	-0.92734	-0.0003864	-0.6183	-0.00025763	416.6699046010402	94.95	1.1346	95.37	94.933	96.068	0.41964	0.036491	0.00082501	NaN	42.474	61	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	892570	+		12399	19522	8545	8553							-0.09690014111299661
GPIDFAFG	8	Unmodified	_GPIDFAFG_					0	0	0			REV__ENSG00000124588|ENST00000380455|NQO2	REV__ENSG00000124588|ENST00000380455|NQO2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.17572021484375	2	412.202879	822.391205	-1.8019	-0.00074276	2.38	0.00098106	0.5781	0.0002383	412.2036084971921	94.602	0.20605	94.833	94.694	94.9	0.23103					6	4	2	0	0	0	0.4196	1	9659	9659		35.201	6.9464	1	82414	+		12400	18597	8546	8554	14175	14175					-0.027095336024331118
GPIEKPVLAH	10	Unmodified	_GPIEKPVLAH_					0	0	0			REV__ENSG00000165943|ENST00000298894|MOAP1	REV__ENSG00000165943|ENST00000298894|MOAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8098754882812	2	530.811116	1059.60768	2.2428	0.0011905	-3.6968	-0.0019623	-1.454	-0.00077183	530.809003180581	103.23	0.34651	103.46	103.2	103.55	0.22556					15	8	2	0	0	0	0.64457	1	12547	12547		47.657	1.6851	1	663860	+		12401	21236	8547	8555	14176	14176					0.0802602223127451
GPIGRVRG	8	Unmodified	_GPIGRVRG_					0	0	0			REV__ENST00000476089.1_1_2:182321937-182323202:+|nuORF	REV__ENST00000476089.1_1_2:182321937-182323202:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2491455078125	2	406.248486	810.48242	3.1802	0.001292	-2.3078	-0.00093752	0.87248	0.00035444	406.24736760071454	117.21	0.50548	117.24	116.92	117.43	0.026466					24	18	2	0	0	0	0.80706	1	12877	12877		19.36	1.0356	1	32600	+		12402	27110	8548	8556	14177	14177					0.06959774885558545
GPILLLLFSFG	11	Unmodified	_GPILLLLFSFG_					0	0	0			REV__ENST00000428388.6_1_6:32133942-32134044:+|nuORF	REV__ENST00000428388.6_1_6:32133942-32134044:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	588.85400390625	2	588.854993	1175.69543	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.753	1	16.83	16.33	17.33	0.07715								0	0	0	0.56276	1	134	134		20.947	4.4738	1		+		12403	23819	8549	8557	14178	14178					0.11461223102037366
GPIMCHLSKIH	11	Unmodified	_GPIMCHLSKIH_					0	0	0			REV__ENSG00000133812|ENST00000256190|SBF2	REV__ENSG00000133812|ENST00000256190|SBF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	618.3258056640625	2	618.323011	1234.63147	2.3149	0.0014314	1.7023	0.0010526	4.0173	0.002484	618.3238221558079	107.78	0.49619	107.88	107.44	107.93	0.10396					48	21	3	0	0	0	0.32541	1	13141	13141		68.846	10.064	1	2781200	+		12404	19097	8550	8558	14179	14179					0.02353796401780528
GPIQKEGKKRK	11	Unmodified	_GPIQKEGKKRK_					0	0	0			REV__ENST00000466133.1_1_3:159818637-159819075:+|nuORF	REV__ENST00000466133.1_1_3:159818637-159819075:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	423.59747314453125	3	423.598094	1267.77245	-1.7147	-0.00072636	0.62535	0.0002649	-1.0894	-0.00046147	423.5982725309242	105.5	3.0222	105.66	104.96	107.98	0.15925					250	75	5	0	0	0	0.6921	1	11265	11265		22.562	0	1	8925200	+		12405	21260	8551	8559	14180	14180					0.1492783437106482
GPIRQFVKS	9	Unmodified	_GPIRQFVKS_					0	0	0			REV__ENSG00000169507|ENST00000685975|SLC38A11	REV__ENSG00000169507|ENST00000685975|SLC38A11	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3041381835938	2	516.303458	1030.59236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.568	1	62.568	62.068	63.068	0								0	0	0	0.29134	1	5470	5470		34.173	1.3601	1		+		12406	21582	8552	8560	14181	14181					0.07829155434069435
GPKAHIRKLA	10	Unmodified	_GPKAHIRKLA_					0	0	0		ENSG00000100347|ENST00000350028|SAMM50;ENST00000474323.5_1_22:44371844-44392260:+|nuORF	ENSG00000100347|ENST00000350028|SAMM50	ENSG00000100347|ENST00000350028|SAMM50	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3168334960938	2	545.845825	1089.6771	0.16082	8.7781E-05	-4.0234	-0.0021961	-3.8625	-0.0021083	545.8431006007138	90.498	0.31621	90.715	90.51	90.826	0.21737					12	7	2	0	0	0	0.37624	1	9082	9082		20.947	8.7401	1	66717			12407	1831	8553	8561	14182	14182					0.13584525970713912
GPKAVGVRG	9	Unmodified	_GPKAVGVRG_					0	0	0		ENST00000575942.1_1_16:4395672-4395975:-|nuORF;ENST00000575884.1_1_16:4395311-4395975:-|nuORF	ENST00000575942.1_1_16:4395672-4395975:-|nuORF	ENST00000575942.1_1_16:4395672-4395975:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.7550964355469	2	420.756144	839.497735	0.83426	0.00035102	-2.8991	-0.0012198	-2.0648	-0.00086878	420.75480151347654	20.751	1.3708	20.819	19.836	21.206	0.068251					89	57	2	0	0	0	0.7932	1	511	511		23.042	1.0826	1	62277			12408	14055	8554	8562	14183	14183					0.0715664168276362
GPKGPTGRGG	10	Unmodified	_GPKGPTGRGG_					0	0	0			REV__nc|ENSG00000130635|P20908-2|COL5A1	REV__nc|ENSG00000130635|P20908-2|COL5A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2406921386719	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.86218	1	8173	8173		32.812	2.3088	1	1244000	+		12409	18885	8555	8563	14184	14184					0.02122863297722688
GPKGPTGRGG	10	Unmodified	_GPKGPTGRGG_					0	0	0			REV__nc|ENSG00000130635|P20908-2|COL5A1	REV__nc|ENSG00000130635|P20908-2|COL5A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2408142089844	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.85934	1	7689	7689		35.618	2.1027	1	1094000	+		12410	18885	8555	8563	14185	14185					0.02122863297722688
GPKGPTGRGG	10	Unmodified	_GPKGPTGRGG_					0	0	0			REV__nc|ENSG00000130635|P20908-2|COL5A1	REV__nc|ENSG00000130635|P20908-2|COL5A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2406921386719	2	442.240858	882.467164	-0.73522	-0.00032514	0.71434	0.00031591	-0.020876	-9.2322E-06	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.8608	1	9419	9419		34.173	0.65696	1	866900	+		12411	18885	8555	8563	14186	14186					0.02122863297722688
GPKGRGGPN	9	Unmodified	_GPKGRGGPN_					0	0	0		nc|ENSG00000130635|P20908-2|COL5A1;ENSG00000130635|ENST00000371817|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2275695800781	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.64922	1	7735	7735		44.117	8.9161	1	743780			12412	3662	8556	8564	14187	14187					0.015265941262327942
GPKGRGGPN	9	Unmodified	_GPKGRGGPN_					0	0	0		nc|ENSG00000130635|P20908-2|COL5A1;ENSG00000130635|ENST00000371817|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2276611328125	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.74721	1	7939	7939		37.159	1.5408	1	961790			12413	3662	8556	8564	14188	14188					0.015265941262327942
GPKGRGGPN	9	Unmodified	_GPKGRGGPN_					0	0	0		nc|ENSG00000130635|P20908-2|COL5A1;ENSG00000130635|ENST00000371817|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.22772216796875	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.74721	1	7420	7420		37.159	1.5408	1	634680			12414	3662	8556	8564	14189	14189					0.015265941262327942
GPKIKAKK	8	Unmodified	_GPKIKAKK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3004455566406	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.80706	5	6768	6395;6446;6469;6556;6768		24.203	6.4008	1	1072400			12415	3371	8557	8565	14190;14191;14192;14193;14194	14194					0.14627262273359065
GPKIKAKK	8	Unmodified	_GPKIKAKK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3000793457031	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.79929	2	7016	6972;7016		18.324	8.8539	1	1680500			12416	3371	8557	8565	14195;14196	14196					0.14627262273359065
GPKIKAKK	8	Unmodified	_GPKIKAKK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.300048828125	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.83058	6	6928	6928;7054;7062;7140;7148;7182		12.959	4.1369	1	1702600			12417	3371	8557	8565	14197;14198;14199;14200;14201;14202	14197					0.14627262273359065
GPKIKAKK	8	Unmodified	_GPKIKAKK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2999572753906	2	435.300188	868.585822	-0.33292	-0.00014492	0.65367	0.00028454	0.32075	0.00013962	435.30030600334584	75.563	1.7203	75.517	74.991	76.711	-0.045975					102	48	3	0	0	0	0.83058	1	7465	7465		12.959	3.4886	1	492420			12418	3371	8557	8565	14203	14203					0.14627262273359065
GPKIKAKK	8	Unmodified	_GPKIKAKK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3002624511719	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.83058	3	6881	6818;6881;7061		12.959	4.7279	1	1921500			12419	3371	8557	8565	14204;14205;14206	14205					0.14627262273359065
GPKIKAKK	8	Unmodified	_GPKIKAKK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3002014160156	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.79929	8	6551	6511;6535;6551;6780;6874;6902;6946;6989		31.955	6.5047	1	2081500			12420	3371	8557	8565	14207;14208;14209;14210;14211;14212;14213;14214	14209					0.14627262273359065
GPKIKAKK	8	Unmodified	_GPKIKAKK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3003845214844	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.83058	5	6698	6533;6558;6623;6698;6755		12.959	3.4886	1	1819800			12421	3371	8557	8565	14215;14216;14217;14218;14219	14218					0.14627262273359065
GPKIKAKK	8	Unmodified	_GPKIKAKK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3001403808594	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.7961	3	6913	6533;6651;6913		17.365	7.1802	1	1852500			12422	3371	8557	8565	14220;14221;14222	14222					0.14627262273359065
GPKIKAKK	8	Unmodified	_GPKIKAKK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3000183105469	2	435.300188	868.585822	-1.3785	-0.00060007	1.5278	0.00066505	0.14927	6.4979E-05	435.30073733409733	75.396	1.3729	75.483	74.943	76.316	0.087639					63	36	2	0	0	0	0.83646	1	6978	6978		12.207	3.3845	1	527430			12423	3371	8557	8565	14223	14223					0.14627262273359065
GPKIKAKK	8	Unmodified	_GPKIKAKK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002624511719	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.79929	2	7561	7561;8479		18.324	3.3845	1	5485100			12424	3371	8557	8565	14224;14225	14224					0.14627262273359065
GPKIKAKK	8	Unmodified	_GPKIKAKK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3004150390625	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.83058	1	7957	7957		12.959	4.1369	1	6323600			12425	3371	8557	8565	14226	14226					0.14627262273359065
GPKIKGDRS	9	Unmodified	_GPKIKGDRS_					0	0	0			REV__ENST00000462377.1_1_3:51663425-51664469:+|nuORF	REV__ENST00000462377.1_1_3:51663425-51664469:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2778625488281	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.67345	1	8277	8277		42.396	8.8806	1	4644500	+		12426	27050	8558	8566	14227	14227					0.060319920203255606
GPKIKGDRS	9	Unmodified	_GPKIKGDRS_					0	0	0			REV__ENST00000462377.1_1_3:51663425-51664469:+|nuORF	REV__ENST00000462377.1_1_3:51663425-51664469:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.277099609375	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.77244	1	7717	7717		32.812	6.1195	1	2142700	+		12427	27050	8558	8566	14228	14228					0.060319920203255606
GPKIKGDRS	9	Unmodified	_GPKIKGDRS_					0	0	0			REV__ENST00000462377.1_1_3:51663425-51664469:+|nuORF	REV__ENST00000462377.1_1_3:51663425-51664469:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2775573730469	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.7932	1	8490	8490		23.042	0	1	7438100	+		12428	27050	8558	8566	14229	14229					0.060319920203255606
GPKILLLLL	9	Unmodified	_GPKILLLLL_					0	0	0		nc|ENSG00000130055|Q9HCC8-2|GDPD2;ENSG00000130055|ENST00000374382|GDPD2;nc|ENSG00000130055|Q9HCC8-3|GDPD2	nc|ENSG00000130055|Q9HCC8-2|GDPD2	nc|ENSG00000130055|Q9HCC8-2|GDPD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.3489990234375	2	490.349346	978.684139	-0.25712	-0.00012608	-2.4886	-0.0012203	-2.7457	-0.0013464	490.348019282133	71.074	3.0831	71.621	70.349	73.432	0.54756					147	75	2	0	0	0	0.7932	1	7785	7785		12.959	4.7279	1	346390			12429	3620	8559	8567	14230	14230					0.19394445798582183
GPKKNKHS	8	Unmodified	_GPKKNKHS_					0	0	0		nc|ENSG00000146856|Q8NEM8|AGBL3;ENSG00000146856|ENST00000436302|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.2588806152344	2	448.259051	894.503549	-1.2915	-0.00057894	1.2791	0.00057339	-0.012395	-5.5564E-06	448.25951221432746	89.806	3.6834	90.019	87.898	91.582	0.21272					200	88	5	0	0	0	0.87064	1	8988	8988		29.15	3.5755	1	3037400			12430	14977	8560	8568	14231	14231					0.05207740194418875
GPKKNKHS	8	Unmodified	_GPKKNKHS_					0	0	0		nc|ENSG00000146856|Q8NEM8|AGBL3;ENSG00000146856|ENST00000436302|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.2580261230469	2	448.259051	894.503549	-1.3629	-0.00061094	1.4471	0.00064866	0.084131	3.7712E-05	448.2596556507269	89.763	2.6764	90.233	89.394	92.071	0.47068					116	66	2	0	0	0	0.89043	2	10681	10631;10681		39.253	3.6634	1	2268200			12431	14977	8560	8568	14232;14233	14233					0.05207740194418875
GPKLARHP	8	Unmodified	_GPKLARHP_					0	0	0		ENST00000535095.5_1_12:95867705-95867888:+|nuORF	ENST00000535095.5_1_12:95867705-95867888:+|nuORF	ENST00000535095.5_1_12:95867705-95867888:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2633972167969	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.85277	1	2955	2955		25.45	6.0902	1	3384400			12432	13418	8561	8569	14234	14234					0.07144347919643224
GPKLARHP	8	Unmodified	_GPKLARHP_					0	0	0		ENST00000535095.5_1_12:95867705-95867888:+|nuORF	ENST00000535095.5_1_12:95867705-95867888:+|nuORF	ENST00000535095.5_1_12:95867705-95867888:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26312255859375	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.82464	1	2740	2740		21.702	1.2205	1	3673500			12433	13418	8561	8569	14235	14235					0.07144347919643224
GPKLARHP	8	Unmodified	_GPKLARHP_					0	0	0		ENST00000535095.5_1_12:95867705-95867888:+|nuORF	ENST00000535095.5_1_12:95867705-95867888:+|nuORF	ENST00000535095.5_1_12:95867705-95867888:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26263427734375	2	438.264136	874.51372	0.23628	0.00010355	-2.5171	-0.0011032	-2.2808	-0.00099961	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.80706	1	3224	3224		19.36	0	1	5350400			12434	13418	8561	8569	14236	14236					0.07144347919643224
GPKLARHP	8	Unmodified	_GPKLARHP_					0	0	0		ENST00000535095.5_1_12:95867705-95867888:+|nuORF	ENST00000535095.5_1_12:95867705-95867888:+|nuORF	ENST00000535095.5_1_12:95867705-95867888:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.262939453125	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.86288	1	3434	3434		26.796	0	1	4268300			12435	13418	8561	8569	14237	14237					0.07144347919643224
GPKLARHP	8	Unmodified	_GPKLARHP_					0	0	0		ENST00000535095.5_1_12:95867705-95867888:+|nuORF	ENST00000535095.5_1_12:95867705-95867888:+|nuORF	ENST00000535095.5_1_12:95867705-95867888:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2627258300781	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.81548	1	2918	2918		20.482	0	1	22924000			12436	13418	8561	8569	14238	14238					0.07144347919643224
GPKLKPKQPYL	11	Unmodified	_GPKLKPKQPYL_					0	0	0			REV__ENST00000425155.6_1_5:176794318-176794990:+|nuORF	REV__ENST00000425155.6_1_5:176794318-176794990:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.597900390625	3	423.595691	1267.76524	0.73411	0.00031097	3.8189	0.0016177	4.553	0.0019286	423.59723125055814	105.63	2.8345	105.73	105.02	107.86	0.10765					213	69	5	0	0	0	0.75495	1	11329	11329		18.531	0	1	8035700	+		12437	26530	8562	8570	14239	14239					0.14207101770671215
GPKLPHAPP	9	Unmodified	_GPKLPHAPP_					0	0	0		ENSG00000189127|ENST00000338682|ANKRD34B	ENSG00000189127|ENST00000338682|ANKRD34B	ENSG00000189127|ENST00000338682|ANKRD34B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2636413574219	2	457.266345	912.518136	-1.1676	-0.0005339	-3.1744	-0.0014516	-4.342	-0.0019855	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.76996	1	7496	7496		33.516	1.5607	1	1329900			12438	7989	8563	8571	14240	14240					0.05837812342554116
GPKLPHAPP	9	Unmodified	_GPKLPHAPP_					0	0	0		ENSG00000189127|ENST00000338682|ANKRD34B	ENSG00000189127|ENST00000338682|ANKRD34B	ENSG00000189127|ENST00000338682|ANKRD34B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26336669921875	2	457.266345	912.518136	-1.5615	-0.00071403	-2.9129	-0.001332	-4.4744	-0.002046	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.76402	1	8136	8136		35.201	3.2459	1	4061400			12439	7989	8563	8571	14241	14241					0.05837812342554116
GPKLTGNKG	9	Unmodified	_GPKLTGNKG_					0	0	0			REV__nc|ENSG00000107186|O75970-5|MPDZ	REV__nc|ENSG00000107186|O75970-5|MPDZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.2546691894531	2	436.253434	870.492316	2.1857	0.00095352	1.2941	0.00056457	3.4798	0.0015181	436.2538705634068	114.35	2.7328	114.38	114.11	116.84	0.026459					117	82	2	0	0	0	0.78983	1	12600	12600		27.882	2.4321	1	78531	+		12440	17649	8564	8572	14242	14242					0.051889181002820806
GPKMLVDLL	9	Oxidation (M)	_GPKM(Oxidation (M))LVDLL_		GPKM(1)LVDLL		GPKM(41)LVDLL	0	0	1		ENSG00000148215|ENST00000373680|OR5C1;ENSG00000187612|ENST00000344514|OR5W2	ENSG00000148215|ENST00000373680|OR5C1	ENSG00000148215|ENST00000373680|OR5C1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29058837890625	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.69624	1	8727	8727		40.778	12.524	1	9566900			12441	4939	8565	8573	14243	14243		87			0.062444553737236674
GPKNAIATQ	9	Unmodified	_GPKNAIATQ_					0	0	0			REV__CON__Q0V8M9	REV__CON__Q0V8M9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2744445800781	2	450.250892	898.48723	-1.7763	-0.00079978	-1.823	-0.00082082	-3.5993	-0.0016206	450.2489508161455	93.487	0.25677	93.68	93.476	93.733	0.19239					7	5	2	0	0	0	0.20789	1	9429	9429		25.574	6.4705	1	31455	+	+	12442	15995	8566	8574	14244	14244					0.03392614237657199
GPKNFDCA	8	Unmodified	_GPKNFDCA_					0	0	0			REV__ENST00000537064.5_1_12:133235217-133253139:-|nuORF	REV__ENST00000537064.5_1_12:133235217-133253139:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.1915283203125	2	426.189445	850.364338	1.6375	0.00069788	2.7199	0.0011592	4.3574	0.0018571	426.19062560903467	97.031	1.3894	97.436	97.053	98.443	0.40498					97	33	4	0	0	0	0.91005	1	11634	11634		42.474	5.446	1	6310200	+		12443	22178	8567	8575	14245	14245					-0.06682965485276782
GPKNFDCA	8	Unmodified	_GPKNFDCA_					0	0	0			REV__ENST00000537064.5_1_12:133235217-133253139:-|nuORF	REV__ENST00000537064.5_1_12:133235217-133253139:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.19073486328125	2	426.189445	850.364338	1.8739	0.00079862	2.9633	0.0012629	4.8372	0.0020616	426.1904930964937	101.89	0.90185	102.15	101.87	102.78	0.26322					47	21	3	0	0	0	0.884	1	12363	12363		33.516	3.0119	1	412000	+		12444	22178	8567	8575	14246	14246					-0.06682965485276782
GPKNQVRP	8	Unmodified	_GPKNQVRP_					0	0	0			REV__AluJr_dup72800|chr17:59204747-59205047:+|2.364450047665624|0.1893768988027336|3.64|63.0|5|2|sense	REV__AluJr_dup72800|chr17:59204747-59205047:+|2.364450047665624|0.1893768988027336|3.64|63.0|5|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.25897216796875	2	448.259051	894.503549	-0.14447	-6.4758E-05	0.22166	9.9363E-05	0.077198	3.4605E-05	448.2590229245312	90.101	3.0472	90.17	88.225	91.272	0.068695					215	72	5	0	0	0	0.84341	1	9251	9251		24.203	1.1603	1	2722700	+		12445	15384	8568	8576	14247	14247					0.05207740194418875
GPKNQVRP	8	Unmodified	_GPKNQVRP_					0	0	0			REV__AluJr_dup72800|chr17:59204747-59205047:+|2.364450047665624|0.1893768988027336|3.64|63.0|5|2|sense	REV__AluJr_dup72800|chr17:59204747-59205047:+|2.364450047665624|0.1893768988027336|3.64|63.0|5|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.25885009765625	2	448.259051	894.503549	1.4362	0.00064381	-1.3421	-0.00060159	0.09419	4.2221E-05	448.25829457253	89.934	3.412	89.982	87.811	91.223	0.048157					180	81	5	0	0	0	0.87922	1	9299	9299		31.955	3.7006	1	2959200	+		12446	15384	8568	8576	14248	14248					0.05207740194418875
GPKNQVRP	8	Unmodified	_GPKNQVRP_					0	0	0			REV__AluJr_dup72800|chr17:59204747-59205047:+|2.364450047665624|0.1893768988027336|3.64|63.0|5|2|sense	REV__AluJr_dup72800|chr17:59204747-59205047:+|2.364450047665624|0.1893768988027336|3.64|63.0|5|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.2589111328125	2	448.259051	894.503549	-1.7824	-0.000799	1.7883	0.00080162	0.0058491	2.6219E-06	448.2597133351224	89.882	2.6909	90.057	88.956	91.647	0.17579					189	63	5	0	0	0	0.84341	1	8957	8957		24.203	3.2558	1	2344600	+		12447	15384	8568	8576	14249	14249					0.05207740194418875
GPKPVRQTG	9	Unmodified	_GPKPVRQTG_					0	0	0			REV__ENSG00000169181|ENST00000447459|GSG1L	REV__ENSG00000169181|ENST00000447459|GSG1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.27191162109375	2	470.272158	938.529764	1.675	0.00078769	-1.7547	-0.00082518	-0.079724	-3.7492E-05	470.2713101405092	92.346	2.9868	92.282	91.318	94.305	-0.06414					149	70	4	0	0	0	0.78983	1	9744	9744		27.882	1.0861	1	1961400	+		12448	21558	8569	8577	14250	14250					0.058040093658974
GPKRIFAPP	9	Unmodified	_GPKRIFAPP_					0	0	0		ENST00000464510.5_1_7:100016692-100018272:-|nuORF;nc|ENSG00000078487|Q9H0M4-2|ZCWPW1;nc|ENSG00000078487|Q9H0M4-5|ZCWPW1;nc|ENSG00000078487|Q9H0M4|ZCWPW1;ENSG00000078487|ENST00000684423|ZCWPW1	ENST00000464510.5_1_7:100016692-100018272:-|nuORF	ENST00000464510.5_1_7:100016692-100018272:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79571533203125	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.78536	1	4284	4284		29.15	8.6677	1	781720			12449	1400	8570	8578	14251	14251					0.08446074267976655
GPKRIFAPP	9	Unmodified	_GPKRIFAPP_					0	0	0		ENST00000464510.5_1_7:100016692-100018272:-|nuORF;nc|ENSG00000078487|Q9H0M4-2|ZCWPW1;nc|ENSG00000078487|Q9H0M4-5|ZCWPW1;nc|ENSG00000078487|Q9H0M4|ZCWPW1;ENSG00000078487|ENST00000684423|ZCWPW1	ENST00000464510.5_1_7:100016692-100018272:-|nuORF	ENST00000464510.5_1_7:100016692-100018272:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956848144531	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.7932	1	3963	3963		26.796	2.5934	1	1346800			12450	1400	8570	8578	14252	14252					0.08446074267976655
GPKRIFAPP	9	Unmodified	_GPKRIFAPP_					0	0	0		ENST00000464510.5_1_7:100016692-100018272:-|nuORF;nc|ENSG00000078487|Q9H0M4-2|ZCWPW1;nc|ENSG00000078487|Q9H0M4-5|ZCWPW1;nc|ENSG00000078487|Q9H0M4|ZCWPW1;ENSG00000078487|ENST00000684423|ZCWPW1	ENST00000464510.5_1_7:100016692-100018272:-|nuORF	ENST00000464510.5_1_7:100016692-100018272:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79608154296875	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.7932	1	4239	4239		18.324	0	1	748320			12451	1400	8570	8578	14253	14253					0.08446074267976655
GPKRIFAPP	9	Unmodified	_GPKRIFAPP_					0	0	0		ENST00000464510.5_1_7:100016692-100018272:-|nuORF;nc|ENSG00000078487|Q9H0M4-2|ZCWPW1;nc|ENSG00000078487|Q9H0M4-5|ZCWPW1;nc|ENSG00000078487|Q9H0M4|ZCWPW1;ENSG00000078487|ENST00000684423|ZCWPW1	ENST00000464510.5_1_7:100016692-100018272:-|nuORF	ENST00000464510.5_1_7:100016692-100018272:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7955017089844	2	491.795269	981.575986	-1.1119	-0.00054683	2.4388	0.0011994	1.3269	0.00065256	491.79642278746286	73.027	0.75407	73.11	72.701	73.455	0.083138					42	26	2	0	0	0	0.7932	1	6694	6694		25.45	0	1	82376			12452	1400	8570	8578	14254	14254					0.08446074267976655
GPKRIFAPP	9	Unmodified	_GPKRIFAPP_					0	0	0		ENST00000464510.5_1_7:100016692-100018272:-|nuORF;nc|ENSG00000078487|Q9H0M4-2|ZCWPW1;nc|ENSG00000078487|Q9H0M4-5|ZCWPW1;nc|ENSG00000078487|Q9H0M4|ZCWPW1;ENSG00000078487|ENST00000684423|ZCWPW1	ENST00000464510.5_1_7:100016692-100018272:-|nuORF	ENST00000464510.5_1_7:100016692-100018272:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7966003417969	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.58	1	59.58	59.08	60.08	0.00051117								0	0	0	0.34024	1	5122	5122		17.365	0	1				12453	1400	8570	8578	14255	14255					0.08446074267976655
GPKSTGSTYG	10	Unmodified	_GPKSTGSTYG_					0	0	0		ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.7281799316406	2	477.729989	953.445425	-1.6875	-0.00080617	-1.149	-0.0005489	-2.8365	-0.0013551	477.72927840585464	97.94	1.0527	98.136	97.721	98.773	0.19585					50	23	3	0	0	0	0.86218	1	10128	10128		32.812	0.85756	1	460730			12454	6667	8571	8579	14256	14256					-0.03315986241511837
GPKTLPVL	8	Unmodified	_GPKTLPVL_					0	0	0		ENST00000368218.8_2_1:156698667-156698928:+|nuORF	ENST00000368218.8_2_1:156698667-156698928:+|nuORF	ENST00000368218.8_2_1:156698667-156698928:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7666320800781	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.8347	1	2782	2782		23.042	1.3402	1	669780			12455	10585	8572	8580	14257	14257					0.09792178253792372
GPKVRPPPL	9	Unmodified	_GPKVRPPPL_					0	0	0			REV__ENST00000380775.3_7:74298902-74299554:-|nuORF	REV__ENST00000380775.3_7:74298902-74299554:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.80108642578125	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.7932	1	9807	9807		26.796	1.3459	1	17379000	+		12456	25953	8573	8581	14258	14258					0.1102236078503438
GPLARHCH	8	Unmodified	_GPLARHCH_					0	0	0			REV__ENST00000319296.9_1_16:30429606-30429675:+|nuORF	REV__ENST00000319296.9_1_16:30429606-30429675:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.7251281738281	2	445.724321	889.434089	1.0481	0.00046718	-0.22681	-0.00010109	0.82132	0.00036608	445.7244055808773	100.53	0.92635	100.83	100.45	101.37	0.2999					53	22	4	0	0	0	0.9159	1	12162	12162		44.531	2.0566	1	1243200	+		12457	24985	8574	8582	14259	14259					-0.015050420259967723
GPLARHPH	8	Unmodified	_GPLARHPH_					0	0	0		ENST00000436636.6_1_3:171177857-171178079:-|nuORF	ENST00000436636.6_1_3:171177857-171178079:-|nuORF	ENST00000436636.6_1_3:171177857-171178079:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7443542480469	2	442.746111	883.477669	0.70525	0.00031225	-3.6345	-0.0016091	-2.9292	-0.0012969	442.7443686579111	91.271	2.0811	91.72	90.611	92.692	0.44958					87	49	3	0	0	0	0.87276	1	10785	10785		29.842	0	1	3166400			12458	11724	8575	8583	14260	14260					0.031268907427943304
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.1886291503906	2	422.186903	842.359253	2.0292	0.0008567	2.3343	0.00098551	4.3635	0.0018422	422.18780289042525	101.44	0.86912	101.74	101.44	102.31	0.2999					44	25	2	0	0	0	0.79972	3	12297	12280;12297;12307		62.978	19.564	1	3258100	+		12459	25616	8576	8584	14261;14262;14263	14262					-0.06823269347887617
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.18829345703125	2	422.186903	842.359253	2.0685	0.00087329	2.2212	0.00093776	4.2897	0.0018111	422.18796389765333	102.33	0.76801	102.59	102.11	102.88	0.26322					44	18	4	0	0	0	0.88915	1	12428	12428		35.201	5.3592	1	1605600	+		12460	25616	8576	8584	14264	14264					-0.06823269347887617
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.18902587890625	2	422.186903	842.359253	2.1271	0.00089804	2.7151	0.0011463	4.8422	0.0020443	422.1879436838742	103.41	0.96365	103.64	103.27	104.23	0.22555					42	23	2	0	0	0	0.60155	5	12583	12548;12559;12571;12583;12605		71.378	10.234	1	1970500	+		12461	25616	8576	8584	14265;14266;14267;14268;14269	14268					-0.06823269347887617
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.1889953613281	2	422.186903	842.359253	2.1776	0.00091935	1.1695	0.00049376	3.3471	0.0014131	422.1878859259197	104.59	0.97499	104.78	104.15	105.13	0.18888					78	24	4	0	0	0	0.60155	7	12737	12695;12717;12729;12737;12749;12758;12767		71.378	24.611	1	2830900	+		12462	25616	8576	8584	14270;14271;14272;14273;14274;14275;14276	14273					-0.06823269347887617
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.1887512207031	2	422.186903	842.359253	2.2164	0.00093575	1.5889	0.0006708	3.8053	0.0016065	422.18787253857664	105.23	1.5658	105.39	105.1	106.66	0.15583					118	51	5	0	0	0	0.9159	3	12787	12787;12799;12879		52.299	11.015	1	2294800	+		12463	25616	8576	8584	14277;14278;14279	14277					-0.06823269347887617
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.18878173828125	2	422.186903	842.359253	2.6651	0.0011252	0.26686	0.00011267	2.932	0.0012378	422.1875352500893	101.42	0.78451	101.74	101.5	102.29	0.3251					49	21	3	0	0	0	0.91005	3	12366	12332;12356;12366		54.765	19.564	1	3340500	+		12464	25616	8576	8584	14280;14281;14282	14282					-0.06823269347887617
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1893615722656	2	422.186903	842.359253	3.3516	0.001415	1.2532	0.00052908	4.6048	0.0019441	422.18733705477956	103.33	0.95329	103.59	103.33	104.29	0.26524					40	22	2	0	0	0	0.84634	4	12611	12588;12611;12622;12635		60.294	13.528	1	1633700	+		12465	25616	8576	8584	14283;14284;14285;14286	14284					-0.06823269347887617
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1888732910156	2	422.186903	842.359253	3.7553	0.0015854	-0.69371	-0.00029288	3.0616	0.0012926	422.1872219331884	104.53	1.0794	104.76	104.25	105.33	0.2268					81	25	5	0	0	0	0.79972	6	12773	12753;12763;12773;12785;12798;12808		62.978	16.212	1	3012900	+		12466	25616	8576	8584	14287;14288;14289;14290;14291;14292	14289					-0.06823269347887617
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1889343261719	2	422.186903	842.359253	4.0203	0.0016973	0.68557	0.00028944	4.7059	0.0019868	422.18713437938374	105.17	1.5784	105.4	105.12	106.7	0.22681					80	51	2	0	0	0	0.60155	7	12908	12819;12829;12840;12851;12871;12896;12908		71.378	19.079	1	2737200	+		12467	25616	8576	8584	14293;14294;14295;14296;14297;14298;14299	14299					-0.06823269347887617
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	422.186903	842.359253	-0.18533	-7.8244E-05	5.069	0.0021401	4.8837	0.0020618	422.18891526009656	105.23	0.42484	105.22	104.94	105.37	-0.014809	0.30964	0.0011809	NaN	71.378	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33909	+		12468	25616	8576	8584							-0.06823269347887617
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	422.186903	842.359253	-1.733	-0.00073164	6.4189	0.00271	4.6859	0.0019783	422.1895893829377	104.73	0.53167	104.9	104.65	105.18	0.17095	-0.0053856	0.0023207	NaN	71.378	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137410	+		12469	25616	8576	8584							-0.06823269347887617
GPLCSTEH	8	Unmodified	_GPLCSTEH_					0	0	0			REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	REV__ENST00000369209.7_3_10:118443420-118451907:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	422.186903	842.359253	0.73398	0.00030988	4.2467	0.0017929	4.9807	0.0021028	422.18868630192776	104.77	0.49218	104.88	104.7	105.19	0.10766	-0.026133	0.00048656	NaN	71.378	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105190	+		12470	25616	8576	8584							-0.06823269347887617
GPLDFSCNA	9	Carbamidomethyl (C)	_GPLDFSC(Carbamidomethyl (C))NA_	GPLDFSC(1)NA		GPLDFSC(48)NA		0	1	0		nc|ENSG00000130182|Q96SZ4|ZSCAN10;ENSG00000130182|ENST00000576985|ZSCAN10;chr16:3092316-3092542|32|18.53|0.02|9.65|-|0|ZSCAN10,ZSCAN10|1	nc|ENSG00000130182|Q96SZ4|ZSCAN10	nc|ENSG00000130182|Q96SZ4|ZSCAN10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.7135009765625	2	490.710742	979.406931	1.0119	0.00049656	4.4632	0.0021901	5.4751	0.0026867	490.71308582341277	95.838	1.6901	96.258	95.585	97.275	0.42051					139	40	6	0	0	0	0.58151	1	11471	11471		47.916	7.1374	1	5952200			12471	3623	8577	8585	14300	14300	50				-0.08359615147696786
GPLDGESY	8	Unmodified	_GPLDGESY_					0	0	0			REV__ENSG00000197557|ENST00000355689|TTC30A	REV__ENSG00000197557|ENST00000355689|TTC30A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.18408203125	2	419.184883	836.355213	0.66144	0.00027727	-1.8585	-0.00077903	-1.197	-0.00050177	419.1832644153146	92.644	1.2902	92.803	92.369	93.659	0.15874					85	30	4	0	0	0	0.81548	1	9401	9401		20.482	0	1	854090	+		12472	23158	8578	8586	14301	14301					-0.06951035569954911
GPLDGESY	8	Unmodified	_GPLDGESY_					0	0	0			REV__ENSG00000197557|ENST00000355689|TTC30A	REV__ENSG00000197557|ENST00000355689|TTC30A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1838073730469	2	419.184883	836.355213	0.63595	0.00026658	-3.8851	-0.0016286	-3.2491	-0.001362	419.18328969471196	86.477	1.2293	86.92	86.409	87.638	0.44331					73	29	4	0	0	0	0.86288	1	10124	10124		26.796	0	1	2405500	+		12473	23158	8578	8586	14302	14302					-0.06951035569954911
GPLDGESY	8	Unmodified	_GPLDGESY_					0	0	0			REV__ENSG00000197557|ENST00000355689|TTC30A	REV__ENSG00000197557|ENST00000355689|TTC30A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1839294433594	2	419.184883	836.355213	-0.61734	-0.00025878	-3.4208	-0.0014339	-4.0381	-0.0016927	419.18379974001596	92.26	1.9431	92.723	91.934	93.877	0.46249					113	45	4	0	0	0	0.88915	1	10956	10956		35.201	1.6851	1	2961200	+		12474	23158	8578	8586	14303	14303					-0.06951035569954911
GPLFPSKK	8	Unmodified	_GPLFPSKK_					0	0	0			REV__nc|ENSG00000130856|Q9UL36|ZNF236	REV__nc|ENSG00000130856|Q9UL36|ZNF236	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.7675476074219	2	437.263271	872.511988	1.7902	0.0007828	4.1025	0.0017939	5.8928	0.0025767	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.8347	1	778	778		23.042	1.3402	1	738160	+		12475	18916	8579	8587	14304	14304					0.07063294111037521
GPLGPIRFQSE	11	Unmodified	_GPLGPIRFQSE_					0	0	0			REV__nc|ENSG00000121933|P0DMS9|TMIGD3	REV__nc|ENSG00000121933|P0DMS9|TMIGD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8240966796875	2	600.822212	1199.62987	-0.59314	-0.00035637	4.4207	0.002656	3.8275	0.0022997	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.7144	1	6769	6769		29.17	3.1067	1	825510	+		12476	29818	8580	8588	14305	14305					0.038042019090198664
GPLHPQGPV	9	Unmodified	_GPLHPQGPV_					0	0	0			REV__nc|ENSG00000157766|P16112-3|ACAN	REV__nc|ENSG00000157766|P16112-3|ACAN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.24530029296875	2	451.248152	900.481751	-1.2821	-0.00057856	2.6153	0.0011801	1.3331	0.00060157	451.2491871267672	67.547	1.2746	67.683	67.257	68.531	0.13522					88	48	2	0	0	0	0.7932	1	6022	6022		19.36	1.995	1	186190	+		12477	20562	8581	8589	14306	14306					0.02752935445857929
GPLHTIKN	8	Unmodified	_GPLHTIKN_					0	0	0			REV__ENSG00000178732|ENST00000692618|GP5	REV__ENSG00000178732|ENST00000692618|GP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2554626464844	2	440.255977	878.497401	-1.4732	-0.0006486	0.019542	8.6034E-06	-1.4537	-0.00064	440.255873281753	75.377	0.64651	75.502	75.091	75.737	0.12545					28	16	2	0	0	0	0.86288	1	7001	7001		26.796	0	1	97336	+		12478	22292	8582	8590	14307	14307					0.05329221962904285
GPLIIHKRSRF	11	Unmodified	_GPLIIHKRSRF_					0	0	0		CON__Q3KUS7	CON__Q3KUS7	CON__Q3KUS7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.93939208984375	3	441.938451	1322.79352	-0.63554	-0.00028087	3.7441	0.0016547	3.1086	0.0013738	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.74022	2	4566	4555;4566		24.232	5.4997	1	409610		+	12479	618	8583	8591	14308;14309	14309					0.14503844470573313
GPLKSHGK	8	Unmodified	_GPLKSHGK_					0	0	0			REV__nc|ENSG00000153266|Q8TBJ5-2|FEZF2	REV__nc|ENSG00000153266|Q8TBJ5-2|FEZF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.1756286621094	2	412.24287	822.471186	2.1383	0.00088148	2.3369	0.00096338	4.4752	0.0018449	412.2428904917783	94.863	0.19785	95.295	95.202	95.4	0.4324					6	4	2	0	0	0	0.4196	1	11321	11321		68.485	27.912	1	38862	+		12480	20342	8584	8592	14310	14310					0.05284952791430442
GPLLACLF	8	Unmodified	_GPLLACLF_					0	0	0		ENSG00000121053|ENST00000225371|EPX	ENSG00000121053|ENST00000225371|EPX	ENSG00000121053|ENST00000225371|EPX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2335205078125	2	417.233125	832.451696	0.11985	5.0006E-05	-2.0451	-0.0008533	-1.9253	-0.00080329	417.23328861254936	32.607	0.53484	32.717	32.499	33.034	0.10991					51	25	3	0	0	0	0.88393	1	1539	1539		33.493	8.989	1	151210			12481	3162	8585	8593	14311	14311					0.028768604562969813
GPLLPTLTA	9	Unmodified	_GPLLPTLTA_					0	0	0		ENSG00000103067|ENST00000473183|ESRP2;nc|ENSG00000103067|Q9H6T0|ESRP2;ENST00000566774.1_1_16:68264768-68266536:-|nuORF	ENSG00000103067|ENST00000473183|ESRP2	ENSG00000103067|ENST00000473183|ESRP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.76824951171875	2	441.768386	881.522219	-0.15332	-6.7733E-05	-0.82572	-0.00036478	-0.97905	-0.00043251	441.76810949175115	107.35	0.84094	107.31	106.9	107.75	-0.034409					58	19	4	0	0	0	0.7932	1	11665	11665		25.45	4.9683	1	1492500			12482	2053	8586	8594	14312	14312					0.07671857045590968
GPLLVIGSL	9	Unmodified	_GPLLVIGSL_					0	0	0		ENST00000442865.1_1_7:29638488-29724509:-|nuORF;ENST00000426767.1_1_7:29690917-29724509:-|nuORF	ENST00000442865.1_1_7:29638488-29724509:-|nuORF	ENST00000442865.1_1_7:29638488-29724509:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2516784667969	2	434.778754	867.542954	-1.2815	-0.00055715	3.7324	0.0016228	2.4509	0.0010656	434.78076490705865	81.227	0.37795	81.227	80.991	81.369	0					19	12	2	0	0	0	0.20789	1	7539	7539		25.45	1.2474	1	51049			12483	11562	8587	8595	14313	14313					0.10388447425270897
GPLLVIGSL	9	Unmodified	_GPLLVIGSL_					0	0	0		ENST00000442865.1_1_7:29638488-29724509:-|nuORF;ENST00000426767.1_1_7:29690917-29724509:-|nuORF	ENST00000442865.1_1_7:29638488-29724509:-|nuORF	ENST00000442865.1_1_7:29638488-29724509:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2516784667969	2	434.778754	867.542954	-1.2753	-0.00055447	3.913	0.0017013	2.6377	0.0011468	434.78062866401245	81.451	0.65895	81.451	81.306	81.965	0					30	20	2	0	0	0	0.20789	1	7539	7539		25.45	1.2474	1	43690			12484	11562	8587	8595	14314	14314					0.10388447425270897
GPLNLAGSGI	10	Unmodified	_GPLNLAGSGI_					0	0	0		ENSG00000205143|ENST00000378909|ARID3C	ENSG00000205143|ENST00000378909|ARID3C	ENSG00000205143|ENST00000378909|ARID3C	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.7525634765625	2	449.753267	897.491981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.773	1	25.516	25.016	26.016	-0.2572								0	0	0	0.45132	1	1357	1357		32.812	0	1				12485	8514	8588	8596	14315	14315					0.03913498380427427
GPLPAKDIHL	10	Unmodified	_GPLPAKDIHL_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8115234375	2	530.811116	1059.60768	2.1944	0.0011648	-2.3913	-0.0012693	-0.19691	-0.00010452	530.8089951106499	102.41	1.0747	102.67	101.8	102.88	0.26323					40	26	3	0	0	0	0.71042	1	12446	12446		44.117	1.7207	1	654720			12486	5511	8589	8597	14316	14316					0.0802602223127451
GPLPARHH	8	Unmodified	_GPLPARHH_					0	0	0		ENST00000362057.3_1_9:117266551-117266902:-|nuORF	ENST00000362057.3_1_9:117266551-117266902:-|nuORF	ENST00000362057.3_1_9:117266551-117266902:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.74481201171875	2	442.746111	883.477669	-0.84967	-0.00037619	-1.9572	-0.00086653	-2.8068	-0.0012427	442.74508565704974	91.361	1.8975	91.832	90.855	92.753	0.47068					98	45	4	0	0	0	0.92176	1	10893	10893		46.766	2.2354	1	3563500			12487	10500	8590	8598	14317	14317					0.031268907427943304
GPLPVHTK	8	Unmodified	_GPLPVHTK_					0	0	0		ENSG00000160194|ENST00000354250|NDUFV3	ENSG00000160194|ENST00000354250|NDUFV3	ENSG00000160194|ENST00000354250|NDUFV3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.7524108886719	2	424.75307	847.491587	0.12148	5.16E-05	-1.3322	-0.00056587	-1.2107	-0.00051427	424.75237083509853	66.591	1.0467	67.142	66.525	67.572	0.55071					64	32	3	0	0	0	0.91005	1	7270	7270		42.474	17.024	1	363930			12488	5563	8591	8599	14318	14318					0.06174123451228297
GPLTIRDV	8	Unmodified	_GPLTIRDV_					0	0	0		nc|ENSG00000197134|Q9Y2Q1-4|ZNF257;nc|ENSG00000197134|Q9Y2Q1-2|ZNF257;ENSG00000197134|ENST00000594947|ZNF257	nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.75518798828125	2	435.75581	869.497067	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.988	1	66.541	66.041	67.041	0.5526								0	0	0	0.29755	1	7205	7205		24.203	2.2429	1				12489	8137	8592	8600	14319	14319					0.0570980224304094
GPLTPEVL	8	Unmodified	_GPLTPEVL_					0	0	0			REV__nc|ENSG00000007202|Q14667-2|BLTP2;REV__nc|ENSG00000007202|Q14667-4|BLTP2	REV__nc|ENSG00000007202|Q14667-2|BLTP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2379455566406	2	413.239461	824.46437	0.52355	0.00021635	-1.497	-0.00061862	-0.97345	-0.00040227	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.87922	1	7355	7355		31.955	1.4512	1	1692300	+		12490	16118;29007	8593	8601	14320	14320					0.04511595120175116
GPLVCEQH	8	Unmodified	_GPLVCEQH_					0	0	0		nc|ENSG00000019991|P14210-3|HGF;ENSG00000019991|ENST00000222390|HGF	nc|ENSG00000019991|P14210-3|HGF	nc|ENSG00000019991|P14210-3|HGF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.27099609375	2	441.710545	881.406537	-0.87837	-0.00038798	-0.24741	-0.00010928	-1.1258	-0.00049727	441.71008527683034	83.971	0.62048	84.406	84.045	84.666	0.43538					18	14	2	0	0	0	0.4196	1	9754	9754		57.811	17.239	1	48243			12491	841	8594	8602	14321	14321					-0.038909900768885564
GPLVRDMS	8	Oxidation (M)	_GPLVRDM(Oxidation (M))S_		GPLVRDM(1)S		GPLVRDM(50)S	0	0	1			REV__ENST00000393539.6_1_16:71495681-71495720:-|nuORF	REV__ENST00000393539.6_1_16:71495681-71495720:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.725341796875	2	445.723652	889.432752	1.0481	0.00046718	1.2735	0.00056761	2.3216	0.0010348	445.7244055808773	100.53	0.92635	100.83	100.45	101.37	0.2999					53	22	4	0	0	0	0.92973	1	12186	12186		50.025	9.2464	1	1243200	+		12492	26058	8595	8603	14322	14322					-0.01638720905395985
GPMCQCQG	8	Unmodified	_GPMCQCQG_					0	0	0			REV__ENST00000479448.1_1_7:107591647-107592525:-|nuORF	REV__ENST00000479448.1_1_7:107591647-107592525:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.17572021484375	2	412.148409	822.282265	0.36322	0.0001497	-4.3865	-0.0018079	-4.0232	-0.0016582	412.1459061265719	95.303	0.23872	95.723	95.666	95.904	0.41964					11	5	3	0	0	0	0.4196	1	11436	11436		26.796	17.326	1	225340	+		12493	17007	8596	8604	14323	14323					-0.13598527160229423
GPMGDERI	8	Unmodified	_GPMGDERI_					0	0	0			REV__nc|ENSG00000148200|Q15406-5|NR6A1	REV__nc|ENSG00000148200|Q15406-5|NR6A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7094421386719	2	437.708002	873.401452	-0.42349	-0.00018537	3.75	0.0016414	3.3265	0.001456	437.7094765272451	85.211	1.9048	85.651	85.067	86.972	0.43967					69	46	2	0	0	0	0.89494	1	9953	9953		37.159	4.3467	1	498150	+		12494	20101	8597	8605	14324	14324					-0.040312939395107605
GPMRLCPH	8	Carbamidomethyl (C)	_GPMRLC(Carbamidomethyl (C))PH_	GPMRLC(1)PH		GPMRLC(49)PH		0	1	0			REV__ENST00000485820.1_1_11:66052175-66053099:-|nuORF	REV__ENST00000485820.1_1_11:66052175-66053099:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.236083984375	2	484.233664	966.452776	1.1008	0.00053307	3.9587	0.001917	5.0596	0.00245	484.2355889219141	87.173	0.81998	87.099	86.646	87.466	-0.073997					58	18	4	0	0	0	0.92774	1	9029	9029		49.211	6.7363	1	2636900	+		12495	27533	8598	8606	14325	14325	337				-0.031792484464517656
GPMRRRRKRRS	11	Unmodified	_GPMRRRRKRRS_					0	0	0			REV__ENST00000502669.5_1_4:8230233-8239327:+|nuORF	REV__ENST00000502669.5_1_4:8230233-8239327:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.26702880859375	3	485.960255	1454.85893	-0.045213	-2.1972E-05	-1.1432	-0.00055557	-1.1884	-0.00057754	485.9605282501536	85.652	0.20969	86.095	86.032	86.241	0.44331					5	4	2	0	0	0	0.18216	1	10007	10007		6.001	0	1	44005	+		12496	24250	8599	8607	14326	14326					0.1496993544462839
GPNATFCQ	8	Unmodified	_GPNATFCQ_					0	0	0		nc|ENSG00000151388|P58397-3|ADAMTS12;ENSG00000151388|ENST00000504830|ADAMTS12	nc|ENSG00000151388|P58397-3|ADAMTS12	nc|ENSG00000151388|P58397-3|ADAMTS12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1835632324219	2	419.18162	836.348688	1.7002	0.00071268	2.3356	0.00097904	4.0358	0.0016917	419.18283597364456	92.161	2.0295	92.608	91.837	93.866	0.44661					131	47	5	0	0	0	0.91472	1	10925	10925		44.117	1.6423	1	2677100			12497	5114	8600	8608	14327	14327					-0.0760325200232046
GPNATFCQ	8	Unmodified	_GPNATFCQ_					0	0	0		nc|ENSG00000151388|P58397-3|ADAMTS12;ENSG00000151388|ENST00000504830|ADAMTS12	nc|ENSG00000151388|P58397-3|ADAMTS12	nc|ENSG00000151388|P58397-3|ADAMTS12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1841125488281	2	419.18162	836.348688	2.1215	0.00088931	2.5221	0.0010572	4.6437	0.0019465	419.18264095568793	100	1.9591	100.35	99.506	101.46	0.34591					92	48	2	0	0	0	0.91472	1	12098	12098		44.117	3.5442	1	9424600			12498	5114	8600	8608	14328	14328					-0.0760325200232046
GPNEKKPGPG	10	Unmodified	_GPNEKKPGPG_					0	0	0			REV__nc|ENSG00000113303|Q6UX41-2|BTNL8	REV__nc|ENSG00000113303|Q6UX41-2|BTNL8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.26361083984375	2	490.761623	979.508694	-1.969	-0.0009663	2.0846	0.0010231	0.11566	5.676E-05	490.762449773505	19.368	0.28389	19.368	19.242	19.526	0					14	10	2	0	0	0	0.70553	1	417	417		44.377	3.599	1	24114	+		12499	29787	8601	8609	14329	14329					0.018119992663855555
GPNFNGPH	8	Unmodified	_GPNFNGPH_					0	0	0		nc|ENSG00000165494|O94913|PCF11;ENSG00000165494|ENST00000690938|PCF11	nc|ENSG00000165494|O94913|PCF11	nc|ENSG00000165494|O94913|PCF11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.1912536621094	2	420.193377	838.372201	-1.7658	-0.00074196	-3.4224	-0.0014381	-5.1881	-0.00218	420.1920369086779	93.807	1.578	94.036	93.32	94.898	0.22863					60	37	3	0	0	0	0.92176	1	9536	9536		46.766	0.81448	1	1141800			12500	6087	8602	8610	14330	14330					-0.05345070173473232
GPNFNGPH	8	Unmodified	_GPNFNGPH_					0	0	0		nc|ENSG00000165494|O94913|PCF11;ENSG00000165494|ENST00000690938|PCF11	nc|ENSG00000165494|O94913|PCF11	nc|ENSG00000165494|O94913|PCF11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.1910095214844	2	420.193377	838.372201	-1.8849	-0.00079204	-2.7295	-0.0011469	-4.6144	-0.001939	420.192116172397	93.945	2.7081	94.143	92.357	95.065	0.19827					82	64	2	0	0	0	0.89457	1	9528	9528		37.028	1.8278	1	1157900			12501	6087	8602	8610	14331	14331					-0.05345070173473232
GPNGNQHQ	8	Unmodified	_GPNGNQHQ_					0	0	0			REV__ENSG00000101916|ENST00000218032|TLR8	REV__ENSG00000101916|ENST00000218032|TLR8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.1914978027344	2	426.191365	850.368178	1.2211	0.00052043	-1.3488	-0.00057486	-0.12772	-5.4433E-05	426.1908077193733	97.101	1.266	97.492	97.115	98.381	0.39065					86	30	4	0	0	0	0.91005	1	11689	11689		42.474	8.9589	1	6288000	+		12502	17311	8603	8611	14332	14332					-0.06299159667196363
GPNGQCDF	8	Unmodified	_GPNGQCDF_					0	0	0			REV__ENSG00000180917|ENST00000434935|CMTR2	REV__ENSG00000180917|ENST00000434935|CMTR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.18414306640625	2	419.163428	836.312302	2.1064	0.00088291	0.36015	0.00015096	2.4665	0.0010339	419.16369940385107	100.01	0.18724	100.36	100.23	100.41	0.34591					6	4	2	0	0	0	0.4196	1	12121	12121		40.573	17.53	1	61464	+		12503	22426	8604	8612	14333	14333					-0.11240128899032698
GPNKLFIR	8	Unmodified	_GPNKLFIR_					0	0	0		ENSG00000196199|ENST00000361479|MPHOSPH8	ENSG00000196199|ENST00000361479|MPHOSPH8	ENSG00000196199|ENST00000361479|MPHOSPH8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28924560546875	2	472.787444	943.560336	2.803	0.0013252	1.1935	0.00056428	3.9965	0.0018895	472.78822322934934	114.11	1.0102	114.08	113.49	114.5	-0.024452					41	33	2	0	0	0	0.4196	1	12633	12633		19.36	1.0356	1	115850			12504	8025	8605	8613	14334	14334					0.08629787750942342
GPNRRRPLS	9	Unmodified	_GPNRRRPLS_					0	0	0			REV__nc|nan|A6NFR6|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3069458007812	2	526.807231	1051.59991	-0.60466	-0.00031854	-1.7933	-0.00094472	-2.3979	-0.0012633	526.8081877026477	101.2	1.1278	101.2	100.73	101.86	0					41	26	2	0	0	0	0.7932	1	10273	10273		26.693	0	1	206580	+		12505	30324	8606	8614	14335	14335					0.07617307754389913
GPNRRRPLS	9	Unmodified	_GPNRRRPLS_					0	0	0			REV__nc|nan|A6NFR6|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.8082885742188	2	526.807231	1051.59991	-1.5277	-0.0008048	3.0793	0.0016222	1.5516	0.00081739	526.8087430402255	100.83	1.7886	101	100.55	102.33	0.17199					107	43	4	0	0	0	0.41566	1	10482	10482		56.721	4.4219	1	3074100	+		12506	30324	8606	8614	14336	14336					0.07617307754389913
GPNRRRPLS	9	Unmodified	_GPNRRRPLS_					0	0	0			REV__nc|nan|A6NFR6|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.808349609375	2	526.807231	1051.59991	2.1591	0.0011374	-1.7045	-0.00089792	0.45462	0.00023949	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.18601	3	12208	12208;12276;12303		76.774	3.4199	1	36320000	+		12507	30324	8606	8614	14337;14338;14339	14337					0.07617307754389913
GPNRRRPLS	9	Unmodified	_GPNRRRPLS_					0	0	0			REV__nc|nan|A6NFR6|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8078002929688	2	526.807231	1051.59991	1.4964	0.00078833	-1.0075	-0.00053077	0.48892	0.00025757	526.8069621242416	97.94	1.6392	98.317	97.185	98.824	0.37678					70	34	4	0	0	0	0.41566	1	11835	11835		56.721	5.3856	1	2595400	+		12508	30324	8606	8614	14340	14340					0.07617307754389913
GPNRRRPLS	9	Unmodified	_GPNRRRPLS_					0	0	0			REV__nc|nan|A6NFR6|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8084716796875	2	526.807231	1051.59991	2.4511	0.0012913	-1.9686	-0.001037	0.48256	0.00025421	526.8063545435555	100.49	2.2675	100.83	100.38	102.64	0.34591					144	58	4	0	0	0	0.38563	3	12210	12210;12321;12398		58.782	8.8041	1	37709000	+		12509	30324	8606	8614	14341;14342;14343	14341					0.07617307754389913
GPNRRRPLSR	10	Unmodified	_GPNRRRPLSR_					0	0	0			REV__nc|nan|A6NFR6|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.5744934082031	3	403.574283	1207.70102	2.7142	0.0010954	-1.4746	-0.00059509	1.2396	0.00050028	403.5735867782374	82.542	1.5525	82.601	81.516	83.068	0.059158					87	35	3	0	0	0	0.86338	1	8271	8271		31.634	2.4642	1	371500	+		12510	30324	8607	8615	14344	14344					0.10547759457085704
GPNRRRPLSR	10	Unmodified	_GPNRRRPLSR_					0	0	0			REV__nc|nan|A6NFR6|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.57489013671875	3	403.574283	1207.70102	2.802	0.0011308	-1.41	-0.00056903	1.392	0.00056177	403.5736497882377	83.618	2.5639	83.677	83.026	85.59	0.059258					112	58	3	0	0	0	0.86549	1	8439	8439		29.551	0.38069	1	261970	+		12511	30324	8607	8615	14345	14345					0.10547759457085704
GPNRRRPLSR	10	Unmodified	_GPNRRRPLSR_					0	0	0			REV__nc|nan|A6NFR6|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.57476806640625	3	403.574283	1207.70102	0.56211	0.00022685	0.74748	0.00030166	1.3096	0.00052852	403.57452270455985	81.745	1.4637	81.891	80.868	82.331	0.14551					81	33	4	0	0	0	0.86647	1	7778	7778		28.577	1.827	1	2051300	+		12512	30324	8607	8615	14346	14346					0.10547759457085704
GPNRRRPLSR	10	Unmodified	_GPNRRRPLSR_					0	0	0			REV__nc|nan|A6NFR6|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5747375488281	3	403.574283	1207.70102	0.57405	0.00023167	0.54113	0.00021839	1.1152	0.00045006	403.57443061209773	82.843	3.1803	82.99	82.289	85.469	0.14694					168	73	3	0	0	0	0.86446	1	8110	8110		30.569	0	1	1495300	+		12513	30324	8607	8615	14347	14347					0.10547759457085704
GPNRRRPLSR	10	Unmodified	_GPNRRRPLSR_					0	0	0			REV__nc|nan|A6NFR6|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5746154785156	3	403.574283	1207.70102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.339	1	81.453	80.953	81.953	0.11426								0	0	0	0.45132	1	7743	7743		42.338	7.1599	1		+		12514	30324	8607	8615	14348	14348					0.10547759457085704
GPNRRRPLSR	10	Unmodified	_GPNRRRPLSR_					0	0	0			REV__nc|nan|A6NFR6|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5749206542969	3	403.574283	1207.70102	1.058	0.00042698	0.28037	0.00011315	1.3384	0.00054013	403.5743201000087	79.412	0.85108	79.828	79.359	80.21	0.41621					61	19	4	0	0	0	0.83456	1	9070	9070		37.508	0	1	1726100	+		12515	30324	8607	8615	14349	14349					0.10547759457085704
GPNSSTNM	8	Unmodified	_GPNSSTNM_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.170166015625	2	404.16871	806.322867	-1.318	-0.00053271	4.3696	0.0017661	3.0516	0.0012334	404.1707263168683	78.641	1.8199	78.641	78.235	80.055	0					146	66	5	0	0	0	0.87922	2	7213	7213;7267		35.618	7.736	1	3046600	+		12516	23202	8608	8616	14350;14351	14350					-0.0880414624457444
GPNSSTNM	8	Unmodified	_GPNSSTNM_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.1702880859375	2	404.16871	806.322867	-0.18774	-7.5878E-05	3.363	0.0013592	3.1752	0.0012833	404.170229386983	78.542	2.4005	78.598	78.112	80.513	0.056114					177	77	5	0	0	0	0.86288	3	7609	7609;7628;7651		33.516	4.366	1	6189200	+		12517	23202	8608	8616	14352;14353;14354	14352					-0.0880414624457444
GPNSSTNM	8	Unmodified	_GPNSSTNM_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.1702575683594	2	404.16871	806.322867	0.028783	1.1633E-05	2.5917	0.0010475	2.6205	0.0010591	404.17015585403414	78.633	4.5965	78.579	78.135	82.731	-0.053558					226	127	5	0	0	0	0.86288	5	7811	7811;7841;7863;7897;7935		37.159	5.6333	1	6964800	+		12518	23202	8608	8616	14355;14356;14357;14358;14359	14355					-0.0880414624457444
GPNSSTNM	8	Unmodified	_GPNSSTNM_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.1703796386719	2	404.16871	806.322867	2.4772	0.0010012	0.73353	0.00029647	3.2107	0.0012977	404.16914392538314	78.456	2.0058	78.508	78.086	80.092	0.051682					179	62	5	0	0	0	0.884	5	7789	7676;7703;7726;7750;7789		44.117	12.01	1	6709200	+		12519	23202	8608	8616	14360;14361;14362;14363;14364	14364					-0.0880414624457444
GPNSSTNM	8	Unmodified	_GPNSSTNM_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.1702575683594	2	404.16871	806.322867	0.53213	0.00021507	2.6453	0.0010691	3.1774	0.0012842	404.1699082116052	78.324	2.0905	78.461	78.03	80.121	0.13667					171	70	5	0	0	0	0.884	5	7359	7359;7367;7383;7402;7413		33.516	6.7195	1	7251300	+		12520	23202	8608	8616	14365;14366;14367;14368;14369	14365					-0.0880414624457444
GPNSSTNM	8	Unmodified	_GPNSSTNM_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.1705017089844	2	404.16871	806.322867	1.2665	0.00051189	1.33	0.00053756	2.5966	0.0010494	404.16957479262703	77.837	2.6073	78.242	77.72	80.327	0.40531					162	61	5	0	0	0	0.88915	4	8913	8864;8876;8888;8913		38.806	6.0512	1	19504000	+		12521	23202	8608	8616	14370;14371;14372;14373	14373					-0.0880414624457444
GPNSSTNM	8	Unmodified	_GPNSSTNM_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.1700744628906	2	404.16871	806.322867	-0.2371	-9.5827E-05	2.8329	0.001145	2.5958	0.0010491	404.170169463804	77.716	2.6143	78.284	77.489	80.104	0.56836					167	61	5	0	0	0	0.884	7	8854	8854;8866;8878;8890;8902;8914;8927		38.806	6.8513	1	22410000	+		12522	23202	8608	8616	14374;14375;14376;14377;14378;14379;14380	14374					-0.0880414624457444
GPNSTNTTQ	9	Unmodified	_GPNSTNTTQ_					0	0	0			REV__nc|ENSG00000196277|Q14831-2|GRM7	REV__nc|ENSG00000196277|Q14831-2|GRM7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.20947265625	2	460.209421	918.404288	-0.29124	-0.00013403	1.7124	0.00078805	1.4211	0.00065402	460.2101646246407	77.14	1.0429	77.54	77.295	78.337	0.3997					57	25	4	0	0	0	0.71772	1	8774	8774		39.253	0.44669	1	1553600	+		12523	30128	8609	8617	14381	14381					-0.058177472809802566
GPNSTNTTQ	9	Unmodified	_GPNSTNTTQ_					0	0	0			REV__nc|ENSG00000196277|Q14831-2|GRM7	REV__nc|ENSG00000196277|Q14831-2|GRM7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	460.209421	918.404288	-0.2404	-0.00011063	1.526	0.00070228	1.2856	0.00059165	460.21007076984193	76.995	0.98469	77.563	77.356	78.34	0.56836	0.011535	-8.2138E-05	NaN	39.253	50	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1409100	+		12524	30128	8609	8617							-0.058177472809802566
GPPASVHPL	9	Unmodified	_GPPASVHPL_					0	0	0			REV__nc|ENSG00000096080|Q9NVS2-2|MRPS18A	REV__nc|ENSG00000096080|Q9NVS2-2|MRPS18A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.7427673339844	2	437.742702	873.470852	-2.1575	-0.00094443	2.6389	0.0011551	0.48136	0.00021071	437.74373261776793	21.033	0.71996	21.033	20.717	21.437	0					57	33	2	0	0	0	0.78058	1	551	551		30.504	4.9296	1	50494	+		12525	29732	8610	8618	14382	14382					0.029055330715777927
GPPCSCLF	8	Unmodified	_GPPCSCLF_					0	0	0			REV__ENSG00000074181|ENST00000263388|NOTCH3	REV__ENSG00000074181|ENST00000263388|NOTCH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.17578125	2	412.177492	822.340431	-0.18655	-7.6891E-05	-4.0617	-0.0016742	-4.2483	-0.001751	412.17579267785936	95.368	1.8182	95.435	94.838	96.656	0.066727					99	42	3	0	0	0	0.90024	1	9970	9970		39.021	13.571	1	1871100	+		12526	16686	8611	8619	14383	14383					-0.07784522243287029
GPPCSCLF	8	Unmodified	_GPPCSCLF_					0	0	0			REV__ENSG00000074181|ENST00000263388|NOTCH3	REV__ENSG00000074181|ENST00000263388|NOTCH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.17572021484375	2	412.177492	822.340431	-1.8024	-0.00074289	-2.9753	-0.0012263	-4.7776	-0.0019692	412.1764055196895	94.607	2.9265	94.838	94.324	97.25	0.23103					168	69	5	0	0	0	0.87807	1	9659	9659		31.579	6.1287	1	14636000	+		12527	16686	8611	8619	14384	14384					-0.07784522243287029
GPPCSCLF	8	Unmodified	_GPPCSCLF_					0	0	0			REV__ENSG00000074181|ENST00000263388|NOTCH3	REV__ENSG00000074181|ENST00000263388|NOTCH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.1758117675781	2	412.177492	822.340431	-1.9151	-0.00078935	-3.2638	-0.0013452	-5.1788	-0.0021346	412.1764543351216	94.772	2.5614	94.974	94.403	96.965	0.20242					141	60	6	0	0	0	0.90024	1	9620	9620		39.021	1.993	1	13873000	+		12528	16686	8611	8619	14385	14385					-0.07784522243287029
GPPGAPTEL	9	Unmodified	_GPPGAPTEL_					0	0	0		ENSG00000167880|ENST00000301607|EVPL;ENST00000587569.5_1_17:74014525-74023279:-|nuORF	ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.71954345703125	2	419.718893	837.423233	0.21807	9.1526E-05	-0.48356	-0.00020296	-0.26549	-0.00011143	419.718555621952	43.498	1.1548	43.555	43.112	44.267	0.056744					66	27	3	0	0	0	0.72402	1	3063	3063		38.806	6.8513	1	860890			12529	6335	8612	8620	14386	14386					-0.0019816591928929483
GPPGPLPVIKG	11	Unmodified	_GPPGPLPVIKG_					0	0	0			REV__ENSG00000187498|ENST00000375820|COL4A1	REV__ENSG00000187498|ENST00000375820|COL4A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.31396484375	2	516.316035	1030.61752	-0.63969	-0.00033028	-3.0425	-0.0015709	-3.6822	-0.0019012	516.3144152653146	102.55	1.0925	102.55	101.98	103.08	0					67	27	3	0	0	0	0.75495	1	10455	10455		20.947	0.4651	1	640710	+		12530	22918	8613	8621	14387	14387					0.10343210236646883
GPPGPPGRLL	10	Unmodified	_GPPGPPGRLL_					0	0	0			REV__ENSG00000204291|ENST00000375001|COL15A1	REV__ENSG00000204291|ENST00000375001|COL15A1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8009338378906	2	480.784902	959.55525	-0.92583	-0.00044513	1.9672	0.00094582	1.0414	0.00050069	480.7855271641964	95.794	0.21647	95.794	95.699	95.916	0					6	4	2	0	0	0	0.37624	1	9542	9542		33.516	13.034	1	31653	+		12531	23477	8614	8622	14388	14388					0.0738548388833351
GPPGPPGRLL	10	Unmodified	_GPPGPPGRLL_					0	0	0			REV__ENSG00000204291|ENST00000375001|COL15A1	REV__ENSG00000204291|ENST00000375001|COL15A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.8006286621094	2	480.784902	959.55525	-0.095443	-4.5887E-05	-3.9172	-0.0018833	-4.0127	-0.0019292	480.7829241903397	95.586	0.12292	95.651	95.548	95.671	0.06591					4	2	2	0	0	0	0.37624	1	10000	10000		33.516	21.309	1	117640	+		12532	23477	8614	8622	14389	14389					0.0738548388833351
GPPGPPGRLL	10	Unmodified	_GPPGPPGRLL_					0	0	0			REV__ENSG00000204291|ENST00000375001|COL15A1	REV__ENSG00000204291|ENST00000375001|COL15A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8008117675781	2	480.784902	959.55525	-1.6775	-0.00080653	1.9021	0.0009145	0.22458	0.00010797	480.7858529734036	95.008	0.12176	95.211	95.11	95.232	0.20242					4	2	2	0	0	0	0.37624	1	9674	9674		47.916	22.465	1	35780	+		12533	23477	8614	8622	14390	14390					0.0738548388833351
GPPGRVVLDAS	11	Unmodified	_GPPGRVVLDAS_					0	0	0			REV__ENSG00000018236|ENST00000551295|CNTN1	REV__ENSG00000018236|ENST00000551295|CNTN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.2932739257812	2	534.29583	1066.57711	-0.74259	-0.00039676	-1.2826	-0.00068527	-2.0252	-0.001082	534.2951504671357	88.691	3.5877	88.691	87.598	91.185	0					140	83	2	0	0	0	0.69995	1	8656	8656		31.53	8.9502	1	382360	+		12534	16222	8615	8623	14391	14391					0.04648243846213518
GPPLGQEHR	9	Unmodified	_GPPLGQEHR_					0	0	0			REV__nc|ENSG00000203985|Q5T700-2|LDLRAD1	REV__nc|ENSG00000203985|Q5T700-2|LDLRAD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.7596130371094	2	495.759415	989.504277	-1.9425	-0.00096301	2.7963	0.0013863	0.85379	0.00042327	495.7602537576442	19.302	1.1114	19.302	18.834	19.945	0					76	43	2	0	0	0	0.38563	1	422	422		58.782	16.386	1	56551	+		12535	30155	8616	8624	14392	14392					0.00910534843478672
GPPPPPGQPK	10	Unmodified	_GPPPPPGQPK_					0	0	0			REV__ENSG00000251655|ENST00000500254|PRB1	REV__ENSG00000251655|ENST00000500254|PRB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2688293457031	2	486.269084	970.523616	-1.8911	-0.00091961	1.9983	0.00097173	0.10718	5.2119E-05	486.2698850476628	27.483	1.2628	27.483	27.15	28.413	0					114	55	3	0	0	0	0.6116	1	1106	1106		49.442	0	1	238170	+		12536	23874	8617	8625	14393	14393					0.0371749113437545
GPPPPPPGKPQ	11	Unmodified	_GPPPPPPGKPQ_					0	0	0		ENSG00000134551|ENST00000396400|PRH2;ENSG00000231887|ENST00000543626|PRH1	ENSG00000134551|ENST00000396400|PRH2	ENSG00000134551|ENST00000396400|PRH2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.7952880859375	2	534.795466	1067.57638	-1.6021	-0.00085681	1.5908	0.00085076	-0.011304	-6.0455E-06	534.7961451235103	29.642	3.4749	29.642	28.953	32.428	0					302	131	4	0	0	0	0.33869	15	1270	1257;1263;1270;1274;1281;1290;1297;1304;1310;1315;1323;1345;1364;1371;1384		64.207	24.948	1	542890			12537	3943	8618	8626	14394;14395;14396;14397;14398;14399;14400;14401;14402;14403;14404;14405;14406;14407;14408	14396					0.045294491971844764
GPPPPPRLLLL	11	Unmodified	_GPPPPPRLLLL_					0	0	0		ENSG00000150893|ENST00000280481|FREM2;nc|ENSG00000150893|Q5SZK8-2|FREM2	ENSG00000150893|ENST00000280481|FREM2;nc|ENSG00000150893|Q5SZK8-2|FREM2	nc|ENSG00000150893|Q5SZK8-2|FREM2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	585.3177490234375	2	585.373884	1168.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.021	1	62.012	61.512	62.512	-0.0094147								0	0	0	0.56276	1	5748	5748		15.642	0	1				12538	5085;14988	8619	8627	14409	14409					0.15559734087514698
GPPPPQGKP	9	Unmodified	_GPPPPQGKP_					0	0	0		ENSG00000134551|ENST00000396400|PRH2;ENSG00000231887|ENST00000543626|PRH1	ENSG00000134551|ENST00000396400|PRH2	ENSG00000134551|ENST00000396400|PRH2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.7431335449219	2	437.742702	873.470852	-2.1575	-0.00094443	2.6389	0.0011551	0.48136	0.00021071	437.74373261776793	21.033	0.71996	21.033	20.717	21.437	0					57	33	2	0	0	0	0.77546	1	536	536		31.955	0	1	50494			12539	3943	8620	8628	14410	14410					0.029055330715777927
GPPQARAF	8	Unmodified	_GPPQARAF_					0	0	0			REV__ENST00000502559.1_1_4:8237989-8238388:+|nuORF	REV__ENST00000502559.1_1_4:8237989-8238388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.2284851074219	2	422.22722	842.439886	1.4046	0.00059308	0.57845	0.00024424	1.9831	0.00083732	422.2272983859282	64.331	2.0044	64.358	63.19	65.195	0.027138					107	65	3	0	0	0	0.86288	1	6015	6015		26.796	1.3459	1	528250	+		12540	27823	8621	8629	14411	14411					0.012363797573243573
GPPWDKLK	8	Unmodified	_GPPWDKLK_					0	0	0			REV__ENSG00000115548|ENST00000312912|KDM3A;REV__nc|ENSG00000120733|Q7LBC6-3|KDM3B	REV__ENSG00000115548|ENST00000312912|KDM3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7672424316406	2	470.766178	939.517802	-1.9239	-0.00090572	1.9879	0.00093583	0.06397	3.0115E-05	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.87922	1	1418	1418		31.955	2.8053	1	93177	+		12541	18128;18427	8622	8630	14412	14412					0.04562392622699463
GPQGAQEVR	9	Unmodified	_GPQGAQEVR_					0	0	0		ENSG00000162302|ENST00000334205|RPS6KA4;nc|ENSG00000162302|O75676-2|RPS6KA4;ENST00000532885.5_1_11:64129381-64135843:+|nuORF	ENSG00000162302|ENST00000334205|RPS6KA4	ENSG00000162302|ENST00000334205|RPS6KA4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	471.2423095703125	2	471.243598	940.472643	-1.1193	-0.00052749	1.6336	0.00076982	0.51424	0.00024233	471.2441988506581	85.918	3.203	85.918	84.395	87.598	0					120	73	3	0	0	0	0.7932	1	8131	8131		26.693	2.1737	1	202290			12542	5677	8623	8631	14413	14413					2.5420895212846517E-05
GPQGKKGKN	9	Unmodified	_GPQGKKGKN_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26385498046875	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.78058	1	7551	7551		30.504	1.3541	1	1329900			12543	1132	8624	8632	14414	14414					0.05435722848858404
GPQGKKGKN	9	Unmodified	_GPQGKKGKN_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.26348876953125	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.78058	1	8201	8201		30.504	1.3541	1	4597500			12544	1132	8624	8632	14415	14415					0.05435722848858404
GPQGKKGKN	9	Unmodified	_GPQGKKGKN_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2638854980469	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.76255	1	7889	7889		35.618	0	1	4061400			12545	1132	8624	8632	14416	14416					0.05435722848858404
GPQILVVV	8	Unmodified	_GPQILVVV_					0	0	0			REV__nc|ENSG00000105379|P38117-2|ETFB	REV__nc|ENSG00000105379|P38117-2|ETFB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7669372558594	2	412.765646	823.516739	0.2674	0.00011037	3.4179	0.0014108	3.6853	0.0015212	412.76694459903433	48.848	3.1893	48.886	47.742	50.932	0.037731					149	88	4	0	0	0	0.80963	1	3787	3787		15.636	0.97212	1	734040	+		12546	29757	8625	8633	14417	14417					0.0979217825380374
GPQKRNIT	8	Unmodified	_GPQKRNIT_					0	0	0			REV__nc|ENSG00000069431|O60706|ABCC9	REV__nc|ENSG00000069431|O60706|ABCC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.26312255859375	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.89043	2	9700	9700;9710		35.618	7.736	1	3505500	+		12547	16582	8626	8634	14418;14419	14418					0.054357228488470355
GPQNYMAA	8	Unmodified	_GPQNYMAA_					0	0	0		ENST00000569783.1_1_16:65153046-65155878:-|nuORF	ENST00000569783.1_1_16:65153046-65155878:-|nuORF	ENST00000569783.1_1_16:65153046-65155878:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.19158935546875	2	426.189445	850.364338	1.3535	0.00057683	3.0584	0.0013035	4.4119	0.0018803	426.1907911672065	91.251	1.7303	91.7	91.219	92.95	0.44958					94	40	4	0	0	0	0.92176	2	10817	10817;10830		46.766	4.292	1	2972300			12548	13983	8627	8635	14420;14421	14420					-0.06682965485265413
GPQRRLVLGLL	11	Unmodified	_GPQRRLVLGLL_					0	0	0		ENST00000374979.7_2_11:124644802-124670283:-|nuORF	ENST00000374979.7_2_11:124644802-124670283:-|nuORF	ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3555908203125	2	611.393139	1220.77173	-0.4063	-0.00024841	-1.0083	-0.00061647	-1.4146	-0.00086488	611.3916082931139	96.102	0.38808	96.168	96.051	96.439	0.06591					12	8	2	0	0	0	0.17643	1	10101	10101		19.997	11.762	1	33911			12549	10789	8628	8636	14422	14422					0.1701703972200903
GPQSLPLL	8	Unmodified	_GPQSLPLL_					0	0	0		ENSG00000146094|ENST00000510898|DOK3;nc|ENSG00000146094|Q7L591|DOK3	ENSG00000146094|ENST00000510898|DOK3	ENSG00000146094|ENST00000510898|DOK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7461242675781	2	412.747453	823.480354	-0.25099	-0.00010359	-2.4393	-0.0010068	-2.6903	-0.0011104	412.7462313332881	84.857	1.7729	85.304	84.713	86.486	0.44736					79	43	4	0	0	0	0.89962	1	9919	9919		38.806	3.6054	1	1009400			12550	4821	8629	8637	14423	14423					0.06155301357091503
GPQVMLISL	9	Unmodified	_GPQVMLISL_					0	0	0		ENST00000463696.1_1_1:117637951-117640053:+|nuORF;ENSG00000116830|ENST00000369466|TTF2	ENST00000463696.1_1_1:117637951-117640053:+|nuORF	ENST00000463696.1_1_1:117637951-117640053:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2778625488281	2	479.275521	956.536489	-0.098244	-4.7086E-05	4.0257	0.0019294	3.9274	0.0018823	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.77696	1	8601	8601		31.53	1.0262	1	6799600			12551	2950	8630	8638	14424	14424					0.05648186202256511
GPRARTQRLLR	11	Unmodified	_GPRARTQRLLR_					0	0	0		ENSG00000161509|ENST00000293190|GRIN2C	ENSG00000161509|ENST00000293190|GRIN2C	ENSG00000161509|ENST00000293190|GRIN2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2744445800781	3	441.940855	1322.80073	-1.4738	-0.00065135	-1.0116	-0.00044708	-2.4855	-0.0010984	441.94028424164003	56.309	0.61998	56.381	55.844	56.464	0.071835					69	31	3	0	0	0	0.77511	1	4717	4717		16.53	0.52308	1	795270			12552	5636	8631	8639	14425	14425					0.15224577071035128
GPRIKKSTG	9	Unmodified	_GPRIKKSTG_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28741455078125	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.76255	2	10148	9676;10148		35.618	1.1189	1	50946000			12553	3217	8632	8640	14426;14427	14427					0.0874858239999412
GPRIKKSTG	9	Unmodified	_GPRIKKSTG_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28753662109375	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.7932	1	10012	10012		26.693	2.4902	1	48696000			12554	3217	8632	8640	14428	14428					0.0874858239999412
GPRIKKSTG	9	Unmodified	_GPRIKKSTG_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2878112792969	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.7932	1	9924	9924		26.693	4.733	1	40161000			12555	3217	8632	8640	14429	14429					0.0874858239999412
GPRIKKSTG	9	Unmodified	_GPRIKKSTG_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2893371582031	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.7932	1	12900	12900		16.473	0.83134	1	3080300			12556	3217	8632	8640	14430	14430					0.0874858239999412
GPRIKKSTG	9	Unmodified	_GPRIKKSTG_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2874450683594	2	472.287808	942.561064	1.4182	0.00066978	-1.3444	-0.00063493	0.07378	3.4846E-05	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.78983	2	11654	11491;11654		27.882	2.5999	1	21289000			12557	3217	8632	8640	14431;14432	14432					0.0874858239999412
GPRLCPRY	8	Unmodified	_GPRLCPRY_					0	0	0		ENST00000482863.1_1_7:100201527-100201809:+|nuORF	ENST00000482863.1_1_7:100201527-100201809:+|nuORF	ENST00000482863.1_1_7:100201527-100201809:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.2535400390625	2	481.255454	960.496355	-0.56813	-0.00027341	-3.6751	-0.0017687	-4.2432	-0.0020421	481.2536530446073	73.263	0.75666	73.817	73.397	74.153	0.55386					33	23	2	0	0	0	0.93529	1	8224	8224		52.299	0.96372	1	1500300			12558	12495	8633	8641	14433	14433					0.01452684322339337
GPRLESLVL	9	Unmodified	_GPRLESLVL_					0	0	0		ENSG00000162645|ENST00000370466|GBP2;nc|ENSG00000117226|Q9H0R5-4|GBP3;ENSG00000117226|ENST00000370481|GBP3;ENSG00000117228|ENST00000370473|GBP1	ENSG00000162645|ENST00000370466|GBP2	ENSG00000162645|ENST00000370466|GBP2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.2958068847656	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.07	1	65.075	64.575	65.575	0.0046997								0	0	0	0.30416	1	6106	6106		29.15	1.2673	1				12559	5712	8634	8642	14434	14434					0.08914333339930636
GPRLFAPLLS	10	Unmodified	_GPRLFAPLLS_					0	0	0			REV__ENST00000518547.5_2_8:125740417-125740621:-|nuORF	REV__ENST00000518547.5_2_8:125740417-125740621:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.822021484375	2	535.821484	1069.62842	0.011811	6.3284E-06	1.4904	0.00079858	1.5022	0.00080491	535.822094739274	50.903	1.5324	50.901	49.95	51.482	-0.0020447					75	42	4	0	0	0	0.86348	1	4302	4302		31.53	10.583	1	199320	+		12560	28065	8635	8643	14435	14435					0.09638612610956443
GPRLLAHSA	9	Unmodified	_GPRLLAHSA_					0	0	0			REV__ENST00000340648.5_1_21:45114371-45114962:+|nuORF	REV__ENST00000340648.5_1_21:45114371-45114962:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	461.265625	2	461.266876	920.519199	-1.0648	-0.00049114	-3.0408	-0.0014026	-4.1056	-0.0018938	461.26543932022855	93.43	1.414	93.43	92.938	94.352	0					57	32	2	0	0	0	0.7932	1	9202	9202		26.693	1.1189	1	637680	+		12561	25251	8636	8644	14436	14436					0.0557602671146924
GPRLRLRGK	9	Unmodified	_GPRLRLRGK_					0	0	0			REV__ENST00000262519.13_2_16:30968803-30969046:+|nuORF	REV__ENST00000262519.13_2_16:30968803-30969046:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8084716796875	2	526.843616	1051.67268	2.1495	0.0011325	-3.663	-0.0019299	-1.5135	-0.0007974	526.8418441477193	100.37	0.82865	100.7	100.29	101.12	0.33295					26	20	2	0	0	0	0.20789	1	12100	12100		47.916	22.465	1	139860	+		12562	24423	8637	8645	14437	14437					0.14891061547768913
GPRLRLRGK	9	Unmodified	_GPRLRLRGK_					0	0	0			REV__ENST00000262519.13_2_16:30968803-30969046:+|nuORF	REV__ENST00000262519.13_2_16:30968803-30969046:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8082885742188	2	526.843616	1051.67268	2.3965	0.0012626	-4.1217	-0.0021715	-1.7252	-0.00090891	526.8414243697655	100.48	0.64554	100.83	100.49	101.14	0.3459					21	15	2	0	0	0	0.20789	1	12246	12246		37.159	0	1	133510	+		12563	24423	8637	8645	14438	14438					0.14891061547768913
GPRLVRTG	8	Unmodified	_GPRLVRTG_					0	0	0		ENST00000342784.6_1_19:15224787-15224841:+|nuORF	ENST00000342784.6_1_19:15224787-15224841:+|nuORF	ENST00000342784.6_1_19:15224787-15224841:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2615661621094	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.80706	1	9509	9509		19.36	0	1	52688000			12564	10266	8638	8646	14439	14439					0.0755604405703707
GPRPVKRRG	9	Unmodified	_GPRPVKRRG_					0	0	0		ENSG00000164107|ENST00000359562|HAND2	ENSG00000164107|ENST00000359562|HAND2	ENSG00000164107|ENST00000359562|HAND2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.8205871582031	2	511.820141	1021.62573	-0.12593	-6.4454E-05	1.1462	0.00058664	1.0203	0.00052219	511.8205326826124	82.197	0.9657	82.623	82.159	83.124	0.42646					55	23	3	0	0	0	0.76255	1	9513	9513		35.618	4.0885	1	1502000			12565	5919	8639	8647	14440	14440					0.11578201996655935
GPRRGPPA	8	Unmodified	_GPRRGPPA_					0	0	0		ENST00000262376.10_1_16:4897931-4902890:+|nuORF;ENST00000592120.5_2_16:4897931-4898255:+|nuORF	ENST00000262376.10_1_16:4897931-4902890:+|nuORF	ENST00000262376.10_1_16:4897931-4902890:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2314758300781	2	404.232836	806.45112	2.8761	0.0011626	-2.4963	-0.0010091	0.37984	0.00015354	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.83466	1	8511	8511		23.037	1.3344	1	4761400			12566	9436	8640	8648	14441	14441					0.04015201851461825
GPRRPKYSP	9	Unmodified	_GPRRPKYSP_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.2996826171875	2	529.298707	1056.58286	-0.42214	-0.00022344	2.7845	0.0014738	2.3623	0.0012504	529.2999611674875	58.584	1.1615	58.977	58.566	59.728	0.39209					60	27	3	0	0	0	0.69624	1	6165	6165		40.778	0.20554	1	1279600			12567	5245	8641	8649	14442	14442					0.056833871485423515
GPRRPRPHR	9	Unmodified	_GPRRPRPHR_					0	0	0			REV__nc|nan|Q9H7T3|C10orf95	REV__nc|nan|Q9H7T3|C10orf95	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.8331909179688	2	564.834114	1127.65368	1.0144	0.00057298	-1.9397	-0.0010956	-0.92528	-0.00052263	564.8327976075485	20.351	0.45872	19.892	19.687	20.145	-0.4591					22	9	3	0	0	0	0.72402	1	632	632		38.806	1.647	1	153650	+		12568	30330	8642	8650	14443	14443					0.0949552497672812
GPRRPRPHR	9	Unmodified	_GPRRPRPHR_					0	0	0			REV__nc|nan|Q9H7T3|C10orf95	REV__nc|nan|Q9H7T3|C10orf95	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	564.834114	1127.65368	1.0144	0.00057298	-1.9397	-0.0010956	-0.92528	-0.00052263	564.8327976075485	20.351	0.45872	19.892	19.687	20.145	-0.4591	0	0	NaN	38.806	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153650	+		12569	30330	8642	8650							0.0949552497672812
GPRRRRGSERG	11	Unmodified	_GPRRRRGSERG_					0	0	0			REV__ENST00000430430.5_1_8:81398555-81399056:+|nuORF	REV__ENST00000430430.5_1_8:81398555-81399056:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.3628540039062	2	642.361225	1282.7079	1.6043	0.0010305	0.50489	0.00032432	2.1092	0.0013549	642.3621659530644	110.8	0.90775	110.92	110.61	111.52	0.11658					128	36	4	0	0	0	0.70737	1	11953	11953		30.318	0	1	486380	+		12570	26604	8643	8651	14444	14444					0.07785072337628662
GPRRRRGSERG	11	Unmodified	_GPRRRRGSERG_					0	0	0			REV__ENST00000430430.5_1_8:81398555-81399056:+|nuORF	REV__ENST00000430430.5_1_8:81398555-81399056:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3600463867188	2	642.361225	1282.7079	2.0883	0.0013414	0.10759	6.9113E-05	2.1959	0.0014106	642.3608064218109	112.21	4.9435	112.24	112.06	117	0.030602					291	230	2	0	0	0	0.70737	1	13969	13969		30.318	4.7437	1	12073000	+		12571	26604	8643	8651	14445	14445					0.07785072337628662
GPRSCHIH	8	Unmodified	_GPRSCHIH_					0	0	0		chr10:101062115-101064261|47|13.23|0.47|4.81|+|0|KAZALD1,KAZALD1|2;ENST00000477979.5_1_10:102821786-102824056:+|nuORF;ENST00000470106.1_1_10:102822750-102824056:+|nuORF	chr10:101062115-101064261|47|13.23|0.47|4.81|+|0|KAZALD1,KAZALD1|2	chr10:101062115-101064261|47|13.23|0.47|4.81|+|0|KAZALD1,KAZALD1|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7206115722656	2	453.721778	905.429004	0.11596	5.2612E-05	1.54	0.00069872	1.6559	0.00075134	453.72233074559676	94.503	0.38068	94.938	94.824	95.204	0.43539					13	8	2	0	0	0	0.9295	1	11320	11320		55.504	0.73953	1	159580			12572	59	8644	8652	14446	14446					-0.02749345888616972
GPRSFRGRKGR	11	Unmodified	_GPRSFRGRKGR_					0	0	0		ENSG00000182154|ENST00000371443|MRPL41	ENSG00000182154|ENST00000371443|MRPL41	ENSG00000182154|ENST00000371443|MRPL41	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	637.3685302734375	2	637.371061	1272.72757	-1.1676	-0.00074419	0.37762	0.00024068	-0.78998	-0.00050351	637.3712208846088	105.62	2.2472	105.69	104.93	107.17	0.07312					175	54	4	0	0	0	0.7434	1	11206	11206		23.523	0	1	2485300			12573	7426	8645	8653	14447	14447					0.10211448348377417
GPRTKASLSA	10	Unmodified	_GPRTKASLSA_					0	0	0		ENSG00000270765|ENST00000604641|GAS2L2	ENSG00000270765|ENST00000604641|GAS2L2	ENSG00000270765|ENST00000604641|GAS2L2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.3009033203125	2	494.282723	986.550893	-0.074881	-3.7012E-05	-4.2379	-0.0020947	-4.3127	-0.0021317	494.2816299990691	97.293	0.34621	97.355	97.081	97.427	0.062225					15	7	3	0	0	0	0.37624	1	10222	10222		49.442	20.292	1	119940			12574	8975	8646	8654	14448	14448					0.05707974674749039
GPRTLNKQ	8	Unmodified	_GPRTLNKQ_					0	0	0			REV__ENSG00000196421|ENST00000636176|C20orf204	REV__ENSG00000196421|ENST00000636176|C20orf204	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.26318359375	2	457.264333	912.514114	-1.0543	-0.00048207	1.4341	0.00065578	0.37989	0.00017371	457.264828131541	95.464	1.1692	95.464	95.008	96.177	0					62	26	3	0	0	0	0.90465	1	9521	9521		40.573	1.7665	1	518470	+		12575	23128	8647	8655	14449	14449					0.054357228488470355
GPRVQRSL	8	Unmodified	_GPRVQRSL_					0	0	0		nc|ENSG00000138759|Q86XX4|FRAS1;ENSG00000138759|ENST00000512123|FRAS1	nc|ENSG00000138759|Q86XX4|FRAS1	nc|ENSG00000138759|Q86XX4|FRAS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7724304199219	2	456.772326	911.530098	-1.1318	-0.00051697	1.567	0.00071576	0.43521	0.00019879	456.7727770907754	90.264	1.662	90.264	89.603	91.265	0					93	38	4	0	0	0	0.86677	1	8756	8756		27.882	1.1893	1	669440			12576	4327	8648	8656	14450	14450					0.07079429085752054
GPRVQRSL	8	Unmodified	_GPRVQRSL_					0	0	0		nc|ENSG00000138759|Q86XX4|FRAS1;ENSG00000138759|ENST00000512123|FRAS1	nc|ENSG00000138759|Q86XX4|FRAS1	nc|ENSG00000138759|Q86XX4|FRAS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7723693847656	2	456.772326	911.530098	-0.13169	-6.0151E-05	0.064063	2.9262E-05	-0.067625	-3.0889E-05	456.7722620961799	90.094	1.9861	90.163	89.17	91.156	0.068703					88	46	4	0	0	0	0.87479	1	9210	9210		30.504	1.3541	1	947820			12577	4327	8648	8656	14451	14451					0.07079429085752054
GPRWPLTG	8	Unmodified	_GPRWPLTG_					0	0	0		ENST00000372324.5_1_1:44444922-44446927:+|nuORF;ENST00000497866.5_1_1:44444922-44446927:+|nuORF	ENST00000372324.5_1_1:44444922-44446927:+|nuORF	ENST00000372324.5_1_1:44444922-44446927:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2414855957031	2	442.24287	882.471186	-1.4875	-0.00065783	-2.8603	-0.0012649	-4.3478	-0.0019228	442.24148848241214	79.629	2.7036	79.728	77.569	80.272	0.098701					195	94	3	0	0	0	0.80706	1	7405	7405		19.36	1.0356	1	257300			12578	10695	8649	8657	14452	14452					0.025249527914184
GPSEPLIL	8	Unmodified	_GPSEPLIL_					0	0	0			REV__nc|ENSG00000173821|Q63HN8|RNF213	REV__nc|ENSG00000173821|Q63HN8|RNF213	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.23785400390625	2	413.239461	824.46437	-1.5467	-0.00063915	0.5911	0.00024426	-0.95558	-0.00039489	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.88915	1	7291	7291		35.201	5.3592	1	1341700	+		12579	21953	8650	8658	14453	14453					0.04511595120197853
GPSPKQLV	8	Unmodified	_GPSPKQLV_					0	0	0		ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7671813964844	2	413.245078	824.475603	0.20546	8.4906E-05	-0.010155	-4.1966E-06	0.19531	8.0709E-05	413.2451660777287	42.78	0.46879	42.751	42.497	42.966	-0.029461					13	11	2	0	0	0	0.4196	1	3219	3219		37.159	1.5408	1	59719			12580	7667	8651	8659	14454	14454					0.05634417214332643
GPSPNQSH	8	Unmodified	_GPSPNQSH_					0	0	0			REV__nc|ENSG00000176225|Q86VV8-3|RTTN	REV__nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.17559814453125	2	412.188291	822.36203	0.20561	8.4752E-05	-0.81475	-0.00033583	-0.60914	-0.00025108	412.1879168245953	94.885	0.12215	95.305	95.231	95.354	0.41963					4	2	2	0	0	0	0.4196	1	11368	11368		40.573	0	1	31113	+		12581	22116	8652	8660	14455	14455					-0.0562567789871764
GPSRQKPN	8	Unmodified	_GPSRQKPN_					0	0	0			REV__ENST00000375835.8_2_9:91793549-91793630:-|nuORF	REV__ENST00000375835.8_2_9:91793549-91793630:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2408142089844	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.89043	1	7463	7463		35.618	2.1253	1	716910	+		12582	25824	8653	8661	14456	14456					0.021228632976999506
GPSRQKPN	8	Unmodified	_GPSRQKPN_					0	0	0			REV__ENST00000375835.8_2_9:91793549-91793630:-|nuORF	REV__ENST00000375835.8_2_9:91793549-91793630:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2407531738281	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.90465	1	7929	7929		40.573	4.9543	1	1068200	+		12583	25824	8653	8661	14457	14457					0.021228632976999506
GPSRTVPR	8	Unmodified	_GPSRTVPR_					0	0	0			REV__nc|ENSG00000100311|P01127-2|PDGFB	REV__nc|ENSG00000100311|P01127-2|PDGFB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2515563964844	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.88601	1	7321	7321		34.173	6.2903	1	1788100	+		12584	17167	8654	8662	14458	14458					0.048394536773685104
GPSRTVPR	8	Unmodified	_GPSRTVPR_					0	0	0			REV__nc|ENSG00000100311|P01127-2|PDGFB	REV__nc|ENSG00000100311|P01127-2|PDGFB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25140380859375	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.87479	1	7597	7597		30.504	2.6214	1	3322700	+		12585	17167	8654	8662	14459	14459					0.048394536773685104
GPSVQECYH	9	Unmodified	_GPSVQECYH_					0	0	0		nc|ENSG00000290613|Q16609|LPAL2	nc|ENSG00000290613|Q16609|LPAL2	nc|ENSG00000290613|Q16609|LPAL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.23602294921875	2	510.216192	1018.41783	2.3492	0.0011986	0.85099	0.00043419	3.2002	0.0016328	510.2163906883854	27.007	0.66115	26.667	26.368	27.029	-0.34035					26	14	3	0	0	0	0.20789	1	1503	1503		42.396	21.449	1	202690			12586	15338	8655	8663	14460	14460					-0.09064212773409963
GPTAIYCT	8	Unmodified	_GPTAIYCT_					0	0	0		ENST00000416479.1_2_1:101354397-101360312:-|nuORF;ENST00000370114.7_1_1:101354352-101360312:-|nuORF	ENST00000416479.1_2_1:101354397-101360312:-|nuORF	ENST00000416479.1_2_1:101354397-101360312:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.19403076171875	2	413.194196	824.37384	2.528	0.0010445	-3.7212	-0.0015376	-1.1932	-0.00049302	413.1925490682729	78.857	3.5308	78.908	78.449	81.979	0.051674					175	98	2	0	0	0	0.92457	1	7756	7756		47.916	10.887	1	994890			12587	10633	8656	8664	14461	14461					-0.0453719719973833
GPTCLLTT	8	Unmodified	_GPTCLLTT_					0	0	0		ENST00000430801.5_1_7:77290551-77325505:-|nuORF;ENST00000416650.5_1_7:77313641-77325505:-|nuORF;ENST00000398043.2_1_7:77313541-77325220:-|nuORF;ENST00000447009.1_1_7:77314455-77325220:-|nuORF	ENST00000430801.5_1_7:77290551-77325505:-|nuORF	ENST00000430801.5_1_7:77290551-77325505:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.20953369140625	2	403.209847	804.40514	-0.18721	-7.5483E-05	-1.9947	-0.00080429	-2.1819	-0.00087978	403.20895430476565	85.948	2.3712	86.015	85.029	87.4	0.067268					117	54	4	0	0	0	0.884	1	8731	8731		33.516	5.2613	1	1482400			12588	11638	8657	8665	14462	14462					-0.004886241656663515
GPTLDCVC	8	Unmodified	_GPTLDCVC_					0	0	0			REV__ENST00000478245.1_1_10:97452671-97453656:-|nuORF	REV__ENST00000478245.1_1_10:97452671-97453656:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.1704406738281	2	404.172407	806.330261	-1.5918	-0.00064335	-4.3613	-0.0017627	-5.953	-0.0024061	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.86288	1	7421	7421		26.796	6.3143	1	6183600	+		12589	18392	8658	8666	14463	14463					-0.08065129968531437
GPTNVRIEY	9	Unmodified	_GPTNVRIEY_					0	0	0		ENSG00000114737|ENST00000348721|CISH;nc|ENSG00000114737|Q9NSE2-2|CISH;nc|ENSG00000114737|Q9NSE2-3|CISH;ENST00000491847.1_1_3:50645040-50646098:-|nuORF	ENSG00000114737|ENST00000348721|CISH	ENSG00000114737|ENST00000348721|CISH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.7742309570312	2	524.774731	1047.53491	-0.1669	-8.7584E-05	-0.26501	-0.00013907	-0.43191	-0.00022666	524.7745706439647	45.633	0.52795	46.105	45.847	46.375	0.47139					27	12	3	0	0	0	0.29259	2	4252	4252;4265		65.465	16.024	1	1463000			12590	2787	8659	8667	14464;14465	14464					0.013042684378433478
GPTNVRIEY	9	Unmodified	_GPTNVRIEY_					0	0	0		ENSG00000114737|ENST00000348721|CISH;nc|ENSG00000114737|Q9NSE2-2|CISH;nc|ENSG00000114737|Q9NSE2-3|CISH;ENST00000491847.1_1_3:50645040-50646098:-|nuORF	ENSG00000114737|ENST00000348721|CISH	ENSG00000114737|ENST00000348721|CISH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.7741088867188	2	524.774731	1047.53491	-0.45063	-0.00023648	-0.05291	-2.7766E-05	-0.50354	-0.00026424	524.7746667152925	45.451	0.55929	46.346	46.129	46.688	0.89542					27	13	3	0	0	0	0.14236	1	4244	4244		85.161	30.385	1	1743900			12591	2787	8659	8667	14466	14466					0.013042684378433478
GPTPKPPGVIL	11	Unmodified	_GPTPKPPGVIL_					0	0	0		ENSG00000174705|ENST00000311601|SH3PXD2B	ENSG00000174705|ENST00000311601|SH3PXD2B	ENSG00000174705|ENST00000311601|SH3PXD2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.32763671875	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.76322	1	12679	12679		19.104	1.7386	1	4041000			12592	6955	8660	8668	14467	14467					0.10939479408125408
GPTPTLIL	8	Unmodified	_GPTPTLIL_					0	0	0		chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2483825683594	2	406.249829	810.485105	-1.171	-0.0004757	-1.7314	-0.00070337	-2.9023	-0.0011791	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.82464	1	8677	8677		21.702	2.3424	1	30016000			12593	406	8661	8669	14468	14468					0.07228185499855044
GPTPTLIL	8	Unmodified	_GPTPTLIL_					0	0	0		chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24847412109375	2	406.249829	810.485105	1.1516	0.00046786	-4.2235	-0.0017158	-3.0718	-0.0012479	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.884	1	9154	9154		33.516	6.7195	1	58759000			12594	406	8661	8669	14469	14469					0.07228185499855044
GPTPTLIL	8	Unmodified	_GPTPTLIL_					0	0	0		chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24853515625	2	406.249829	810.485105	0.62319	0.00025317	-3.6411	-0.0014792	-3.0179	-0.001226	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.86791	1	8846	8846		28.254	6.5519	1	38001000			12595	406	8661	8669	14470	14470					0.07228185499855044
GPTPTLIL	8	Unmodified	_GPTPTLIL_					0	0	0		chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2485046386719	2	406.249829	810.485105	-1.235	-0.0005017	-1.7781	-0.00072233	-3.013	-0.001224	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.86791	1	10372	10372		28.254	2.8041	1	38125000			12596	406	8661	8669	14471	14471					0.07228185499855044
GPTTCTMP	8	Unmodified	_GPTTCTMP_					0	0	0		ENST00000266646.2_1_12:57849608-57849999:+|nuORF	ENST00000266646.2_1_12:57849608-57849999:+|nuORF	ENST00000266646.2_1_12:57849608-57849999:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.17059326171875	2	404.172407	806.330261	-1.5918	-0.00064335	-4.3613	-0.0017627	-5.953	-0.0024061	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.86288	1	7460	7460		26.796	6.3143	1	6183600			12597	9523	8662	8670	14472	14472					-0.08065129968531437
GPTVLPSE	8	Unmodified	_GPTVLPSE_					0	0	0			REV__ENST00000499346.6_1_5:127418462-127418714:-|nuORF	REV__ENST00000499346.6_1_5:127418462-127418714:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.25579833984375	2	400.213443	798.412334	0.0070884	2.8369E-06	-1.1031	-0.00044146	-1.096	-0.00043862	400.2126025360072	18.76	0.42945	18.131	17.85	18.28	-0.6296					12	9	2	0	0	0	0.4196	1	424	424		12.207	0	1	15114	+		12598	27799	8663	8671	14473	14473					0.005064317064238821
GPTVVIIN	8	Unmodified	_GPTVVIIN_					0	0	0			REV__ENST00000450119.1_1_10:92813377-92813905:+|nuORF	REV__ENST00000450119.1_1_10:92813377-92813905:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.75103759765625	2	406.747453	811.480354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.35	1	118.33	117.83	118.83	-0.024208								0	0	0	0.29245	1	13109	13109		30.504	1.3541	1		+		12599	26862	8664	8672	14474	14474					0.06707301357096185
GPVADLFR	8	Unmodified	_GPVADLFR_					0	0	0		nc|ENSG00000169891|Q8NFH8-4|REPS2;ENSG00000169891|ENST00000357277|REPS2	nc|ENSG00000169891|Q8NFH8-4|REPS2	nc|ENSG00000169891|Q8NFH8-4|REPS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.74273681640625	2	437.742702	873.470852	-2.1575	-0.00094443	2.6389	0.0011551	0.48136	0.00021071	437.74373261776793	21.033	0.71996	21.033	20.717	21.437	0					57	33	2	0	0	0	0.86791	1	557	557		28.254	1.4582	1	50494			12600	6535	8665	8673	14475	14475					0.029055330715777927
GPVEGAFSVY	10	Unmodified	_GPVEGAFSVY_					0	0	0		ENSG00000164733|ENST00000353047|CTSB	ENSG00000164733|ENST00000353047|CTSB	ENSG00000164733|ENST00000353047|CTSB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.250244140625	2	513.250557	1024.48656	0.20601	0.00010573	-0.25456	-0.00013065	-0.048553	-2.492E-05	513.2504117971379	71.021	0.94449	71.568	71.166	72.11	0.54756					58	22	4	0	0	0	0.6116	1	7918	7918		49.442	2.6751	1	938560			12601	5996	8666	8674	14476	14476					-0.024702252020460946
GPVELTLL	8	Unmodified	_GPVELTLL_					0	0	0			REV__nc|ENSG00000155363|Q9HCE1-2|MOV10	REV__nc|ENSG00000155363|Q9HCE1-2|MOV10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.2545471191406	2	421.255111	840.49567	-1.2322	-0.00051907	-1.5244	-0.00064217	-2.7566	-0.0011612	421.25432904467385	84.477	1.3086	84.477	83.963	85.271	0					69	29	3	0	0	0	0.87922	1	7993	7993		31.955	5.1588	1	450410	+		12602	20426	8667	8675	14477	14477					0.0690416815430126
GPVGPRRS	8	Unmodified	_GPVGPRRS_					0	0	0			REV__ENST00000502974.1_1_4:74904133-74904340:-|nuORF	REV__ENST00000502974.1_1_4:74904133-74904340:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2369689941406	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.884	1	6847	6847		33.516	5.2613	1	1692300	+		12603	27833	8668	8676	14478	14478					0.04243184505901354
GPVISKVYIGG	11	Unmodified	_GPVISKVYIGG_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3212890625	2	545.318774	1088.623	0.15103	8.2357E-05	-4.1145	-0.0022437	-3.9634	-0.0021613	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.70737	1	8534	8534		30.318	6.795	1	5755000	+		12604	21648	8669	8677	14479	14479					0.08222889028456848
GPVISTGLLHL	11	Unmodified	_GPVISTGLLHL_					0	0	0		ENSG00000163930|ENST00000460680|BAP1;ENST00000466093.1_1_3:52437126-52437549:-|nuORF	ENSG00000163930|ENST00000460680|BAP1	ENSG00000163930|ENST00000460680|BAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8306274414062	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.64498	1	10867	10867		39.253	5.0803	1	5381700			12605	5883	8670	8678	14480	14480					0.10094577919812764
GPVIVPEE	8	Unmodified	_GPVIVPEE_					0	0	0		nc|ENSG00000185621|Q96KR4-2|LMLN;nc|ENSG00000185621|Q96KR4|LMLN;ENSG00000185621|ENST00000420910|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2269592285156	2	420.229094	838.443634	0.51188	0.00021511	-3.6208	-0.0015216	-3.1089	-0.0013065	420.22745728477395	76.673	2.5132	76.808	74.515	77.028	0.13478					135	81	3	0	0	0	0.884	1	7057	7057		33.516	6.7195	1	323390			12606	7729	8671	8679	14481	14481					0.017950047405292935
GPVLCPAR	8	Unmodified	_GPVLCPAR_					0	0	0			REV__ENST00000237536.8_2_20:35414273-35414927:-|nuORF	REV__ENST00000237536.8_2_20:35414273-35414927:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.728759765625	2	406.725998	811.437443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.674	1	75.721	75.221	76.221	0.046448								0	0	0	0.29498	1	7370	7370		26.796	0	1		+		12607	24217	8672	8680	14482	14482					0.024182080280070295
GPVLEALL	8	Unmodified	_GPVLEALL_					0	0	0		ENST00000473716.5_1_19:38708426-38709789:-|nuORF;nc|ENSG00000011332|Q92782-3|DPF1;nc|ENSG00000011332|Q92782-1|DPF1;ENSG00000011332|ENST00000355526|DPF1	ENST00000473716.5_1_19:38708426-38709789:-|nuORF	ENST00000473716.5_1_19:38708426-38709789:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2500305175781	2	406.249829	810.485105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.16	1	116.09	115.59	116.59	-0.069672								0	0	0	0.30004	1	12470	12470		21.702	0	1				12608	788	8673	8681	14483	14483					0.07228185499855044
GPVLLAGALRV	11	Unmodified	_GPVLLAGALRV_					0	0	0			REV__ENST00000394636.8_1_16:54964782-54965211:+|nuORF	REV__ENST00000394636.8_1_16:54964782-54965211:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.340087890625	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.72228	1	10096	10096		27.882	4.8398	1	1199500	+		12609	26087	8674	8682	14484	14484					0.1408658801931324
GPVLTLGLL	9	Unmodified	_GPVLTLGLL_					0	0	0		nc|ENSG00000135902|Q07001-2|CHRND;ENSG00000135902|ENST00000258385|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.787841796875	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.77546	2	2313	2313;2341		31.955	2.1133	1	11532000			12610	4060	8675	8683	14485;14486	14485					0.11308733942325944
GPVPEPVL	8	Unmodified	_GPVPEPVL_					0	0	0			REV__ENSG00000127666|ENST00000248244|TICAM1	REV__ENSG00000127666|ENST00000248244|TICAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2326965332031	2	404.234179	806.453805	-1.8251	-0.00073778	-1.1309	-0.00045714	-2.956	-0.0011949	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.86791	1	8443	8443		28.254	1.4582	1	3315300	+		12611	18745	8676	8684	14487	14487					0.04283612465758324
GPVPQPVAPAL	11	Unmodified	_GPVPQPVAPAL_					0	0	0			REV__ENST00000484122.5_1_17:12898346-12899317:-|nuORF	REV__ENST00000484122.5_1_17:12898346-12899317:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3038330078125	2	523.305667	1044.59678	-1.4863	-0.0007778	-2.6443	-0.0013838	-4.1306	-0.0021616	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.72918	1	8283	8283		26.693	4.733	1	3566700	+		12612	27505	8677	8685	14488	14488					0.07626619856978323
GPVSPRGR	8	Unmodified	_GPVSPRGR_					0	0	0			REV__ENST00000565081.1_1_16:30205517-30205667:+|nuORF	REV__ENST00000565081.1_1_16:30205517-30205667:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2369384765625	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.8347	1	7046	7046		23.042	2.5607	1	1692300	+		12613	28847	8678	8686	14489	14489					0.04243184505901354
GPVTKESRRR	10	Unmodified	_GPVTKESRRR_					0	0	0		ENST00000568505.6_1_16:57220242-57238444:+|nuORF;ENST00000566352.1_1_16:57220242-57220392:+|nuORF;ENST00000564435.5_1_16:57220203-57238448:+|nuORF;ENST00000394420.8_1_16:57220203-57238444:+|nuORF;ENST00000562959.1_1_16:57220203-57220868:+|nuORF	ENST00000568505.6_1_16:57220242-57238444:+|nuORF	ENST00000568505.6_1_16:57220242-57238444:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.343994140625	2	593.344178	1184.6738	0.88437	0.00052473	-0.48199	-0.00028598	0.40238	0.00023875	593.343785503265	103.21	2.4131	103.4	103.04	105.46	0.18297					159	60	4	0	0	0	0.8651	1	10891	10891		25.574	0	1	4232500			12614	11067	8679	8687	14490	14490					0.08885231126009785
GPVVGARR	8	Unmodified	_GPVVGARR_					0	0	0		nc|ENSG00000085644|O14771-2|ZNF213;ENST00000576863.1_1_16:3188364-3191345:+|nuORF;ENSG00000085644|ENST00000396878|ZNF213	nc|ENSG00000085644|O14771-2|ZNF213	nc|ENSG00000085644|O14771-2|ZNF213	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2483825683594	2	406.248486	810.48242	1.1517	0.00046786	-0.91843	-0.00037311	0.23322	9.4746E-05	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.86288	1	9310	9310		26.796	0	1	58759000			12615	1535	8680	8688	14491	14491					0.06959774885558545
GPVVGARR	8	Unmodified	_GPVVGARR_					0	0	0		nc|ENSG00000085644|O14771-2|ZNF213;ENST00000576863.1_1_16:3188364-3191345:+|nuORF;ENSG00000085644|ENST00000396878|ZNF213	nc|ENSG00000085644|O14771-2|ZNF213	nc|ENSG00000085644|O14771-2|ZNF213	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24859619140625	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.82464	2	9047	9047;9180		21.702	2.3424	1	56664000			12616	1535	8680	8688	14492;14493	14492					0.06959774885558545
GPVVGARR	8	Unmodified	_GPVVGARR_					0	0	0		nc|ENSG00000085644|O14771-2|ZNF213;ENST00000576863.1_1_16:3188364-3191345:+|nuORF;ENSG00000085644|ENST00000396878|ZNF213	nc|ENSG00000085644|O14771-2|ZNF213	nc|ENSG00000085644|O14771-2|ZNF213	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24853515625	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.81548	3	10411	10363;10375;10411		20.482	0	1	28266000			12617	1535	8680	8688	14494;14495;14496	14496					0.06959774885558545
GPVVGRRA	8	Unmodified	_GPVVGRRA_					0	0	0			REV__ENST00000538906.5_2_16:31084355-31084742:-|nuORF	REV__ENST00000538906.5_2_16:31084355-31084742:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2486572265625	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.81724	1	9083	9083		14.664	0.88877	1	56664000	+		12618	28442	8681	8689	14497	14497					0.06959774885547176
GPVVGRRA	8	Unmodified	_GPVVGRRA_					0	0	0			REV__ENST00000538906.5_2_16:31084355-31084742:-|nuORF	REV__ENST00000538906.5_2_16:31084355-31084742:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2484436035156	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.80706	1	10339	10339		19.36	4.6959	1	28266000	+		12619	28442	8681	8689	14498	14498					0.06959774885547176
GPVVPLRLPLC	11	Unmodified	_GPVVPLRLPLC_					0	0	0			REV__ENST00000546151.5_1_11:61120480-61124010:-|nuORF	REV__ENST00000546151.5_1_11:61120480-61124010:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3538818359375	2	582.352094	1162.68964	-1.3468	-0.00078434	3.9839	0.00232	2.637	0.0015357	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.75041	1	12593	12593		21.96	1.9631	1	3937500	+		12620	28457	8682	8690	14499	14499					0.11479801318728278
GPWPQRPLPAS	11	Unmodified	_GPWPQRPLPAS_					0	0	0		ENST00000265678.8_1_6:166825790-166826246:-|nuORF	ENST00000265678.8_1_6:166825790-166826246:-|nuORF	ENST00000265678.8_1_6:166825790-166826246:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	603.3220825195312	2	603.324922	1204.63529	-0.17113	-0.00010325	-4.3269	-0.0026105	-4.4981	-0.0027138	603.3222406194719	97.935	1.7265	97.983	97.17	98.896	0.048164					70	39	3	0	0	0	0.65746	1	10466	10466		37.812	8.6415	1	113740			12621	9510	8683	8691	14500	14500					0.04115925491510097
GPWPQRPLPAS	11	Unmodified	_GPWPQRPLPAS_					0	0	0		ENST00000265678.8_1_6:166825790-166826246:-|nuORF	ENST00000265678.8_1_6:166825790-166826246:-|nuORF	ENST00000265678.8_1_6:166825790-166826246:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	603.324922	1204.63529	-0.50002	-0.00030167	-3.7303	-0.0022506	-4.2303	-0.0025522	603.3225990753277	98.349	1.8578	98.405	97.464	99.322	0.056839	0.2694	0.0013241	NaN	37.812	68	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100860			12622	9510	8683	8691							0.04115925491510097
GPWPQRPLPAS	11	Unmodified	_GPWPQRPLPAS_					0	0	0		ENST00000265678.8_1_6:166825790-166826246:-|nuORF	ENST00000265678.8_1_6:166825790-166826246:-|nuORF	ENST00000265678.8_1_6:166825790-166826246:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	603.324922	1204.63529	2.7464	0.0016569	-7.2072	-0.0043483	-4.4608	-0.0026913	603.3203684927731	98.186	1.8045	98.131	97.314	99.119	-0.054825	-0.0048254	-0.0028713	NaN	37.812	85	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106980			12623	9510	8683	8691							0.04115925491510097
GPWPQRPLPAS	11	Unmodified	_GPWPQRPLPAS_					0	0	0		ENST00000265678.8_1_6:166825790-166826246:-|nuORF	ENST00000265678.8_1_6:166825790-166826246:-|nuORF	ENST00000265678.8_1_6:166825790-166826246:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	603.324922	1204.63529	1.0246	0.00061818	-5.2189	-0.0031487	-4.1943	-0.0025305	603.32161212346	97.932	2.0108	98.16	97.123	99.133	0.22788	0.024093	-0.00047217	NaN	37.812	77	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101920			12624	9510	8683	8691							0.04115925491510097
GPWPQRPLPAS	11	Unmodified	_GPWPQRPLPAS_					0	0	0		ENST00000265678.8_1_6:166825790-166826246:-|nuORF	ENST00000265678.8_1_6:166825790-166826246:-|nuORF	ENST00000265678.8_1_6:166825790-166826246:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	603.324922	1204.63529	0.87829	0.0005299	-5.0749	-0.0030618	-4.1966	-0.0025319	603.3216927379657	97.887	1.9427	98.048	97.176	99.119	0.16073	-0.088172	-0.0002984	NaN	37.812	71	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78504			12625	9510	8683	8691							0.04115925491510097
GPWQHAGS	8	Unmodified	_GPWQHAGS_					0	0	0			REV__ENST00000434206.1_1_3:43020805-43095327:+|nuORF	REV__ENST00000434206.1_1_3:43020805-43095327:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.192138671875	2	420.193377	838.372201	-1.7658	-0.00074196	-3.4224	-0.0014381	-5.1881	-0.00218	420.1920369086779	93.807	1.578	94.036	93.32	94.898	0.22863					60	37	3	0	0	0	0.87922	1	9572	9572		31.955	3.7006	1	1141800	+		12626	19904	8684	8692	14501	14501					-0.05345070173473232
GPWSQPLVVS	10	Unmodified	_GPWSQPLVVS_					0	0	0		ENST00000558165.3_1_15:76552439-76552934:-|nuORF;ENSG00000092445|ENST00000263798|TYRO3	ENST00000558165.3_1_15:76552439-76552934:-|nuORF	ENST00000558165.3_1_15:76552439-76552934:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.287353515625	2	535.287474	1068.5604	-0.84772	-0.00045377	0.96754	0.00051791	0.11983	6.4141E-05	535.2878294310157	86.153	1.0232	86.6	86.194	87.217	0.44736					59	24	4	0	0	0	0.64457	1	10116	10116		47.657	1.6851	1	1143000			12627	1700	8685	8693	14502	14502					0.028857429603021956
GPYAGVMTAY	10	Unmodified	_GPYAGVMTAY_					0	0	0		ENSG00000152127|ENST00000281923|MGAT5	ENSG00000152127|ENST00000281923|MGAT5	ENSG00000152127|ENST00000281923|MGAT5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	515.2409057617188	2	515.239135	1028.46372	-0.37021	-0.00019075	2.7743	0.0014294	2.4041	0.0012387	515.2404361126636	47.52	0.54141	47.539	47.235	47.776	0.018967					38	17	3	0	0	0	0.43769	1	3560	3560		60.972	7.6205	1	721160			12628	5156	8686	8694	14503	14503					-0.04937567591196057
GPYLTATC	8	Unmodified	_GPYLTATC_					0	0	0			REV__ENSG00000101337|ENST00000398022|TM9SF4	REV__ENSG00000101337|ENST00000398022|TM9SF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.1935729980469	2	413.194196	824.37384	-1.7624	-0.00072821	-0.23098	-9.5439E-05	-1.9934	-0.00082365	413.19417749191615	83.551	1.9743	83.689	82.638	84.612	0.13811					89	45	3	0	0	0	0.86791	1	8044	8044		28.254	5.2176	1	313770	+		12629	17269	8687	8695	14504	14504					-0.045371971997496985
GPYLTATC	8	Unmodified	_GPYLTATC_					0	0	0			REV__ENSG00000101337|ENST00000398022|TM9SF4	REV__ENSG00000101337|ENST00000398022|TM9SF4	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	413.194196	824.37384	-1.2395	-0.00051217	-0.64794	-0.00026773	-1.8875	-0.0007799	413.193768033073	83.905	1.3456	83.905	83.442	84.788	0	0.14389	0.00034941	NaN	28.254	46	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71413	+		12630	17269	8687	8695							-0.045371971997496985
GPYLTATC	8	Unmodified	_GPYLTATC_					0	0	0			REV__ENSG00000101337|ENST00000398022|TM9SF4	REV__ENSG00000101337|ENST00000398022|TM9SF4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	413.194196	824.37384	-0.18731	-7.7397E-05	-1.3542	-0.00055956	-1.5416	-0.00063696	413.193519780356	83.777	1.5102	83.843	83.213	84.723	0.066719	0.08223	-0.00023427	NaN	28.254	59	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	230690	+		12631	17269	8687	8695							-0.045371971997496985
GPYLTATC	8	Unmodified	_GPYLTATC_					0	0	0			REV__ENSG00000101337|ENST00000398022|TM9SF4	REV__ENSG00000101337|ENST00000398022|TM9SF4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	413.194196	824.37384	0.63678	0.00026311	-2.4601	-0.0010165	-1.8233	-0.0007534	413.1932545334871	83.904	1.4686	83.835	83.206	84.675	-0.069313	0.073537	-0.0011482	NaN	28.254	73	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	262800	+		12632	17269	8687	8695							-0.045371971997496985
GPYLTATC	8	Unmodified	_GPYLTATC_					0	0	0			REV__ENSG00000101337|ENST00000398022|TM9SF4	REV__ENSG00000101337|ENST00000398022|TM9SF4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	413.194196	824.37384	2.8055	0.0011592	-5.4956	-0.0022708	-2.6901	-0.0011115	413.1923134771027	83.759	1.7797	83.818	83.026	84.806	0.059258	0.057372	-0.0036566	NaN	28.254	73	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	222450	+		12633	17269	8687	8695							-0.045371971997496985
GPYLTATC	8	Unmodified	_GPYLTATC_					0	0	0			REV__ENSG00000101337|ENST00000398022|TM9SF4	REV__ENSG00000101337|ENST00000398022|TM9SF4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	413.194196	824.37384	-1.822	-0.00075285	0.39281	0.00016231	-1.4292	-0.00059055	413.19424312894233	83.437	1.3729	83.602	83.104	84.477	0.1651	-0.15933	0.0012095	NaN	28.254	59	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	372750	+		12634	17269	8687	8695							-0.045371971997496985
GQDAITIRQLE	11	Unmodified	_GQDAITIRQLE_					0	0	0			REV__nc|ENSG00000255529|P0CAP2-2|POLR2M	REV__nc|ENSG00000255529|P0CAP2-2|POLR2M	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.336181640625	2	622.335684	1242.65681	2.9643	0.0018448	-1.825	-0.0011358	1.1393	0.00070904	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.73647	1	12321	12321		28.081	5.039	1	435720	+		12635	30243	8688	8696	14505	14505					0.045192657295501704
GQDTMLKAMF	10	Unmodified	_GQDTMLKAMF_					0	0	0		ENST00000568721.1_1_16:29934667-29937471:-|nuORF;ENSG00000174943|ENST00000568000|KCTD13	ENST00000568721.1_1_16:29934667-29937471:-|nuORF	ENST00000568721.1_1_16:29934667-29937471:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.796630859375	2	571.272652	1140.53075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.267	1	79.366	78.866	79.866	0.098701								0	0	0	0.45132	1	7474	7474		22.58	0	1				12636	6974	8689	8697	14506	14506					-0.03389280371720815
GQDYILAQRN	10	Unmodified	_GQDYILAQRN_					0	0	0		ENSG00000086696|ENST00000199936|HSD17B2;ENST00000566838.2_3_16:82131651-82132038:+|nuORF	ENSG00000086696|ENST00000199936|HSD17B2	ENSG00000086696|ENST00000199936|HSD17B2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3010864257812	2	589.301644	1176.58874	-0.67583	-0.00039826	0.40512	0.00023874	-0.27071	-0.00015953	589.3017524117596	110.44	0.96202	110.38	110.18	111.15	-0.055084					71	33	4	0	0	0	0.8545	1	12004	12004		36.447	3.6343	1	823850			12637	1559	8690	8698	14507	14507					0.0075044086956950196
GQELFEHGSN	10	Unmodified	_GQELFEHGSN_					0	0	0			REV__ENST00000520987.1_1_8:101149771-101157363:-|nuORF	REV__ENST00000520987.1_1_8:101149771-101157363:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.7210083007812	2	559.249077	1116.4836	-0.16946	-9.4768E-05	-1.8669	-0.0010441	-2.0364	-0.0011388	559.2476324889662	53.119	0.37118	53.733	53.531	53.902	0.61436					11	8	2	0	0	0	0.37624	1	5384	5384		45.022	13.492	1	99739	+		12638	20493	8691	8699	14508	14508					-0.0699810032683672
GQGAPSLPTSR	11	Unmodified	_GQGAPSLPTSR_					0	0	0		ENST00000607121.5_1_3:50403067-50403271:+|nuORF;ENST00000606259.5_1_3:50403067-50403750:+|nuORF	ENST00000607121.5_1_3:50403067-50403271:+|nuORF	ENST00000607121.5_1_3:50403067-50403271:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7838745117188	2	535.783087	1069.55162	0.18014	9.6514E-05	-0.40548	-0.00021725	-0.22534	-0.00012073	535.7827337728459	22.797	0.71803	22.186	21.865	22.583	-0.6107					45	17	4	0	0	0	0.56641	1	981	981		47.228	0.7709	1	1025900			12639	14444	8692	8700	14509	14509					0.019627693237907806
GQGGQGGAGH	10	Unmodified	_GQGGQGGAGH_					0	0	0			REV__ENST00000466217.5_1_2:220090131-220093204:-|nuORF	REV__ENST00000466217.5_1_2:220090131-220093204:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.18414306640625	2	413.18354	824.352528	2.34	0.00096685	-2.9343	-0.0012124	-0.59424	-0.00024553	413.18263814360023	99.934	1.4742	100.27	99.852	101.33	0.33294					93	36	4	0	0	0	0.85934	1	12065	12065		35.618	0.41757	1	6186100	+		12640	27123	8693	8701	14510	14510					-0.06667446184246728
GQGLPRPIRIG	11	Unmodified	_GQGLPRPIRIG_					0	0	0			REV__nc|ENSG00000080546|Q9Y6P5|SESN1	REV__nc|ENSG00000080546|Q9Y6P5|SESN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3544921875	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.76322	1	12529	12529		19.104	2.6304	1	3937500	+		12641	16803	8694	8702	14511	14511					0.1186360713677459
GQGPHARGRA	10	Unmodified	_GQGPHARGRA_					0	0	0		ENST00000468686.5_1_22:21982709-21983718:-|nuORF	ENST00000468686.5_1_22:21982709-21983718:-|nuORF	ENST00000468686.5_1_22:21982709-21983718:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.7193298339844	2	503.768106	1005.52166	0.50871	0.00025627	-1.6202	-0.00081622	-1.1115	-0.00055995	503.7671328234338	80.491	0.75114	81.017	80.695	81.446	0.52677					35	17	3	0	0	0	0.37624	1	9341	9341		26.693	4.733	1	440290			12642	12183	8695	8703	14512	14512					0.019118751691280522
GQGPHARGRA	10	Unmodified	_GQGPHARGRA_					0	0	0		ENST00000468686.5_1_22:21982709-21983718:-|nuORF	ENST00000468686.5_1_22:21982709-21983718:-|nuORF	ENST00000468686.5_1_22:21982709-21983718:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	503.768106	1005.52166	-0.52267	-0.0002633	-0.92397	-0.00046547	-1.4466	-0.00072877	503.7676590926568	80.575	0.66827	80.997	80.721	81.39	0.4215	-0.010311	0.00033634	NaN	19.997	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	381450			12643	12183	8695	8703							0.019118751691280522
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.7373046875	2	449.737428	897.460304	-0.32051	-0.00014414	0.55933	0.00025155	0.23882	0.00010741	449.73760373206346	54.69	0.83915	55.097	54.864	55.704	0.40663					36	19	2	0	0	0	0.9159	2	5569	5569;5580		54.765	4.7401	1	951850	+		12644	30214	8696	8704	14513;14514	14513					0.007472271454844304
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.7403564453125	2	449.737428	897.460304	-1.6695	-0.00075083	1.8692	0.00084064	0.19968	8.9801E-05	449.7381670564822	57.241	1.2416	57.635	57.2	58.442	0.39407					52	30	2	0	0	0	0.9159	1	5915	5915		44.531	2.0566	1	642690	+		12645	30214	8696	8704	14515	14515					0.007472271454844304
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.73699951171875	2	449.737428	897.460304	-0.27031	-0.00012157	0.5551	0.00024965	0.28479	0.00012808	449.73754405346205	54.434	1.2594	55.019	54.79	56.05	0.58474					49	29	3	0	0	0	0.93529	2	5564	5564;5602		54.765	17.736	1	917480	+		12646	30214	8696	8704	14516;14517	14516					0.007472271454844304
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	449.737428	897.460304	-1.6231	-0.00072995	1.8686	0.00084038	0.24554	0.00011043	449.7382519910866	57.783	0.58736	57.783	57.503	58.09	0	0.039023	0.00092602	NaN	44.531	28	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62942	+		12647	30214	8696	8704							0.007472271454844304
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	449.737428	897.460304	-0.13089	-5.8868E-05	0.41601	0.0001871	0.28512	0.00012823	449.73749824393474	57.808	0.52749	57.794	57.613	58.141	-0.013641	0.050549	-0.00038055	NaN	44.531	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84590	+		12648	30214	8696	8704							0.007472271454844304
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	449.737428	897.460304	-0.12661	-5.694E-05	0.54378	0.00024456	0.41718	0.00018762	449.7374625966053	57.964	0.73404	57.934	57.557	58.291	-0.029865	0.18983	-0.00026562	NaN	44.531	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61496	+		12649	30214	8696	8704							0.007472271454844304
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	449.737428	897.460304	-1.3258	-0.00059626	1.2657	0.00056925	-0.060071	-2.7016E-05	449.7378935096256	57.726	0.55719	57.805	57.505	58.062	0.079643	0.061439	0.00038375	NaN	44.531	50	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121980	+		12650	30214	8696	8704							0.007472271454844304
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	449.737428	897.460304	0.36372	0.00016358	-0.22321	-0.00010038	0.14051	6.3194E-05	449.73726346462445	57.6	0.47873	57.705	57.49	57.969	0.10549	-0.038559	-0.00095551	NaN	44.531	41	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116250	+		12651	30214	8696	8704							0.007472271454844304
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	449.737428	897.460304	-0.70281	-0.00031608	1.0646	0.00047879	0.3618	0.00016271	449.73777366128826	57.695	0.56387	57.679	57.443	58.007	-0.01643	-0.065361	0.00020284	NaN	44.531	47	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135420	+		12652	30214	8696	8704							0.007472271454844304
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	449.737428	897.460304	-0.32051	-0.00014414	0.55933	0.00025155	0.23882	0.00010741	449.73760373206346	54.69	0.83915	55.097	54.864	55.704	0.40663	0.039015	1.1725E-06	NaN	54.765	36	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	951850	+		12653	30214	8696	8704							0.007472271454844304
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	449.737428	897.460304	-1.6695	-0.00075083	1.8692	0.00084064	0.19968	8.9801E-05	449.7381670564822	57.241	1.2416	57.635	57.2	58.442	0.39407	-0.10914	0.00092653	NaN	44.531	52	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	642690	+		12654	30214	8696	8704							0.007472271454844304
GQGRKCLH	8	Unmodified	_GQGRKCLH_					0	0	0			REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	REV__nc|ENSG00000227942|Q9BZ68|FRMD8P1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	449.737428	897.460304	0.61023	0.00027444	-0.23511	-0.00010574	0.37511	0.0001687	449.7371336846608	57.061	1.1605	57.616	57.27	58.43	0.55513	-0.12778	-0.00096622	NaN	44.531	64	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	671660	+		12655	30214	8696	8704							0.007472271454844304
GQGSMGDVG	9	Unmodified	_GQGSMGDVG_					0	0	0		ENST00000357814.7_2_17:72767432-72767837:-|nuORF	ENST00000357814.7_2_17:72767432-72767837:-|nuORF	ENST00000357814.7_2_17:72767432-72767837:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.1703186035156	2	404.16871	806.322867	-0.18774	-7.5878E-05	3.363	0.0013592	3.1752	0.0012833	404.170229386983	78.542	2.4005	78.598	78.112	80.513	0.056114					177	77	5	0	0	0	0.78983	1	7602	7602		27.882	1.0861	1	6189200			12656	10396	8697	8705	14518	14518					-0.0880414624457444
GQGWRPVL	8	Unmodified	_GQGWRPVL_					0	0	0		ENST00000227752.7_1_11:117871181-117871418:+|nuORF	ENST00000227752.7_1_11:117871181-117871418:+|nuORF	ENST00000227752.7_1_11:117871181-117871418:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30084228515625	2	456.756144	911.497735	0.084057	3.8393E-05	1.1087	0.00050641	1.1928	0.0005448	456.7561411028484	48.784	1.3991	48.784	48.319	49.718	0.00017166					39	31	2	0	0	0	0.4196	1	4075	4075		18.324	1.8513	1	53721			12657	9202	8698	8706	14519	14519					0.03844641682758265
GQKEGHLK	8	Unmodified	_GQKEGHLK_					0	0	0			REV__ENSG00000164935|ENST00000297581|DCSTAMP	REV__ENSG00000164935|ENST00000297581|DCSTAMP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.7510986328125	2	448.751059	895.487565	1.4422	0.00064719	-1.4065	-0.00063119	0.03567	1.6007E-05	448.75032560333665	27.525	0.95263	27.271	26.945	27.897	-0.25465					48	21	3	0	0	0	0.83456	1	1590	1590		60.972	2.19	1	1108300	+		12658	21132	8699	8707	14520	14520					0.035640339575252256
GQKGQVGPPG	10	Unmodified	_GQKGQVGPPG_					0	0	0		ENSG00000184471|ENST00000328449|C1QTNF8	ENSG00000184471|ENST00000328449|C1QTNF8	ENSG00000184471|ENST00000328449|C1QTNF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	462.7482604980469	2	462.748516	923.482479	0.10407	4.8158E-05	3.8739	0.0017926	3.978	0.0018408	462.75015687401225	47.488	0.40091	47.479	47.227	47.628	-0.0093269					19	11	2	0	0	0	0.81018	1	3880	3880		38.806	5.2906	1	220690			12659	7616	8700	8708	14521	14521					0.01767730094900344
GQKRAKETA	9	Unmodified	_GQKRAKETA_					0	0	0			REV__nc|ENSG00000178804|Q8IZA3-2|H1-8	REV__nc|ENSG00000178804|Q8IZA3-2|H1-8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.77984619140625	2	494.780348	987.546142	-1.0037	-0.00049663	0.6697	0.00033135	-0.33405	-0.00016528	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.7932	1	8522	8522		25.574	1.3713	1	265620	+		12660	22295	8701	8709	14522	14522					0.05187090531978811
GQKTRPLN	8	Unmodified	_GQKTRPLN_					0	0	0		ENST00000178640.9_1_15:67835157-67835247:+|nuORF	ENST00000178640.9_1_15:67835157-67835247:+|nuORF	ENST00000178640.9_1_15:67835157-67835247:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2635498046875	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.90983	1	7951	7951		42.396	3.1433	1	2957200			12661	9089	8702	8710	14523	14523					0.05435722848835667
GQLEDIIGR	9	Unmodified	_GQLEDIIGR_					0	0	0			REV__ENSG00000154803|ENST00000285071|FLCN	REV__ENSG00000154803|ENST00000285071|FLCN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.77447509765625	2	500.774731	999.534909	-1.48	-0.00074115	0.77459	0.0003879	-0.70542	-0.00035326	500.77520179835545	50.501	0.59034	50.501	50.257	50.848	0					34	14	3	0	0	0	0.6204	1	4058	4058		45.972	3.108	1	183120	+		12662	20402	8703	8711	14524	14524					0.03512268437862076
GQLHVGHK	8	Unmodified	_GQLHVGHK_					0	0	0			REV__ENSG00000152217|ENST00000649279|SETBP1	REV__ENSG00000152217|ENST00000649279|SETBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.74267578125	2	438.245944	874.477334	-0.67664	-0.00029654	-2.0201	-0.0008853	-2.6967	-0.0011818	438.24464534340893	34.961	0.48121	34.905	34.768	35.25	-0.056381					20	11	2	0	0	0	0.87479	1	2255	2255		30.504	1.3541	1	28993	+		12663	20291	8704	8712	14525	14525					0.03507471022953723
GQLIKSPS	8	Unmodified	_GQLIKSPS_					0	0	0		ENSG00000137513|ENST00000281038|NARS2	ENSG00000137513|ENST00000281038|NARS2	ENSG00000137513|ENST00000281038|NARS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.2449951171875	2	415.242535	828.470518	4.5254	0.0018791	0.48844	0.00020282	5.0138	0.0020819	415.2428634068345	107.07	0.82995	107.22	106.81	107.64	0.14929					51	28	3	0	0	0	0.87064	1	13062	13062		29.15	0	1	2111700			12664	4210	8705	8713	14526	14526					0.04942113351705757
GQLLVCGSLLV	11	Unmodified	_GQLLVCGSLLV_					0	0	0		ENST00000278559.7_1_11:76796081-76823747:+|nuORF;ENST00000456580.6_1_11:76796081-76823747:+|nuORF	ENST00000278559.7_1_11:76796081-76823747:+|nuORF	ENST00000278559.7_1_11:76796081-76823747:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.3218383789062	2	551.32046	1100.62637	0.065704	3.6224E-05	3.6644	0.0020202	3.7301	0.0020565	551.3225662732283	34.542	0.59436	34.485	34.216	34.81	-0.056385					20	12	2	0	0	0	0.68532	1	2196	2196		33.922	1.1092	1	72579			12665	9610	8706	8714	14527	14527					0.08007815810810825
GQLSEPQLI	9	Unmodified	_GQLSEPQLI_					0	0	0			REV__nc|ENSG00000164970|Q8IW50-7|FAM219A	REV__nc|ENSG00000164970|Q8IW50-7|FAM219A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.7715148925781	2	492.771657	983.528761	-0.078994	-3.8926E-05	-0.48491	-0.00023895	-0.5639	-0.00027788	492.7715093797498	72.669	0.60105	72.706	72.5	73.101	0.037148					28	21	2	0	0	0	0.71772	1	6916	6916		39.253	0	1	66732	+		12666	29997	8707	8715	14528	14528					0.03633750206347486
GQLSVHTPK	9	Unmodified	_GQLSVHTPK_					0	0	0		nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1	nc|ENSG00000285708|Q9H334-6|FOXP1	nc|ENSG00000285708|Q9H334-6|FOXP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.77197265625	2	483.771991	965.529429	-0.17004	-8.2263E-05	0.76213	0.0003687	0.59208	0.00028643	483.77201209801933	27.317	1.1049	27.142	26.568	27.673	-0.17559					37	24	3	0	0	0	0.11055	2	1571	1558;1571		90.37	16.158	1	473860			12667	2795	8708	8716	14529;14530	14530					0.045285896460427466
GQLSVHTPK	9	Unmodified	_GQLSVHTPK_					0	0	0		nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1	nc|ENSG00000285708|Q9H334-6|FOXP1	nc|ENSG00000285708|Q9H334-6|FOXP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.77197265625	2	483.771991	965.529429	1.1984	0.00057973	-0.32295	-0.00015624	0.8754	0.0004235	483.771329890809	27.342	1.0861	27.087	26.59	27.676	-0.25465					42	24	3	0	0	0	0.15708	2	1579	1579;1596		82.75	11.455	1	502840			12668	2795	8708	8716	14531;14532	14531					0.045285896460427466
GQPQLILLQP	10	Unmodified	_GQPQLILLQP_					0	0	0			REV__ENST00000388948.7_2_15:101609189-101609468:+|nuORF	REV__ENST00000388948.7_2_15:101609189-101609468:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.830078125	2	553.832049	1105.64954	0.37109	0.00020552	-3.8764	-0.0021469	-3.5053	-0.0019414	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.86348	1	10361	10361		31.53	2.3598	1	1786500	+		12669	25990	8709	8717	14533	14533					0.10094577919812764
GQPRAPRSPVL	11	Unmodified	_GQPRAPRSPVL_					0	0	0			REV__ENST00000268097.9_1_15:72668459-72668681:-|nuORF	REV__ENST00000268097.9_1_15:72668459-72668681:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3423461914062	2	589.343646	1176.67274	-0.65315	-0.00038493	-0.88363	-0.00052076	-1.5368	-0.00090569	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.73621	1	9519	9519		25.126	2.0835	1	5584100	+		12670	24510	8710	8718	14534	14534					0.09147016757128767
GQPRPRVPR	9	Unmodified	_GQPRPRVPR_					0	0	0		ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8167724609375	2	531.817599	1061.62064	-0.7527	-0.0004003	-0.5782	-0.0003075	-1.3309	-0.00070779	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.69624	1	8503	8503		40.778	6.6056	1	2790600			12671	7462	8711	8719	14535	14535					0.09229898134026371
GQPRPRVPR	9	Unmodified	_GQPRPRVPR_					0	0	0		ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8170166015625	2	531.817599	1061.62064	-0.033207	-1.766E-05	-0.82835	-0.00044053	-0.86155	-0.00045819	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.78536	1	8856	8856		29.15	1.2673	1	1254600			12672	7462	8711	8719	14536	14536					0.09229898134026371
GQPRPRVPR	9	Unmodified	_GQPRPRVPR_					0	0	0		ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.816650390625	2	531.817599	1061.62064	1.595	0.00084823	-2.9849	-0.0015874	-1.3899	-0.00073919	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.7932	1	9000	9000		23.042	2.5607	1	1345000			12673	7462	8711	8719	14537	14537					0.09229898134026371
GQPRPRVPR	9	Unmodified	_GQPRPRVPR_					0	0	0		ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8167724609375	2	531.817599	1061.62064	1.8637	0.00099113	-3.2612	-0.0017344	-1.3976	-0.00074324	531.8157444108199	88.686	4.0119	88.613	87.337	91.349	-0.07238					352	95	5	0	0	0	0.76764	2	9142	9142;9155		34.173	3.6689	1	4423300			12674	7462	8711	8719	14538;14539	14538					0.09229898134026371
GQPRPRVPR	9	Unmodified	_GQPRPRVPR_					0	0	0		ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8168334960938	2	531.817599	1061.62064	1.1723	0.00062347	-2.558	-0.0013604	-1.3857	-0.00073692	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.78536	2	9017	9017;9246		29.15	1.2673	1	4413000			12675	7462	8711	8719	14540;14541	14540					0.09229898134026371
GQPRPRVPR	9	Unmodified	_GQPRPRVPR_					0	0	0		ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8167724609375	2	531.817599	1061.62064	0.7269	0.00038658	-2.1356	-0.0011358	-1.4087	-0.00074918	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.7932	1	8804	8804		21.96	2.5999	1	4496300			12676	7462	8711	8719	14542	14542					0.09229898134026371
GQPRPRVPR	9	Unmodified	_GQPRPRVPR_					0	0	0		ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8167724609375	2	531.817599	1061.62064	-1.5109	-0.00080353	0.089216	4.7447E-05	-1.4217	-0.00075608	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.7932	1	8759	8759		26.693	2.1737	1	4022300			12677	7462	8711	8719	14543	14543					0.09229898134026371
GQPRPRVPR	9	Unmodified	_GQPRPRVPR_					0	0	0		ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	ENSG00000182575|ENST00000328741|NXPH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8167724609375	2	531.817599	1061.62064	1.0704	0.00056928	-2.3163	-0.0012319	-1.2459	-0.00066258	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.7932	1	10430	10430		21.96	1.9631	1	4490200			12678	7462	8711	8719	14544	14544					0.09229898134026371
GQPSPFTHPHL	11	Unmodified	_GQPSPFTHPHL_					0	0	0		nc|ENSG00000196236|Q9NQH7-3|XPNPEP3;nc|ENSG00000196236|Q9NQH7-5|XPNPEP3;nc|ENSG00000196236|Q9NQH7-4|XPNPEP3;ENSG00000196236|ENST00000357137|XPNPEP3	nc|ENSG00000196236|Q9NQH7-3|XPNPEP3	nc|ENSG00000196236|Q9NQH7-3|XPNPEP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.5395202636719	3	406.540245	1216.59891	0.099671	4.052E-05	-3.1313	-0.001273	-3.0316	-0.0012325	406.538929984911	30.393	0.56029	30.505	30.29	30.85	0.11225					56	26	3	0	0	0	0.69071	1	1347	1347		33.039	0	1	153330			12679	8032	8712	8720	14545	14545					-0.0007295140519545384
GQPSPVVFDL	10	Unmodified	_GQPSPVVFDL_					0	0	0			REV__ENST00000524230.6_3_3:126326756-126373974:-|nuORF	REV__ENST00000524230.6_3_3:126326756-126373974:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.7803344726562	2	529.779482	1057.54441	-0.36911	-0.00019554	3.5969	0.0019056	3.2278	0.00171	529.7811640199199	55.532	0.95031	55.495	55.207	56.157	-0.036827					76	33	3	0	0	0	0.86471	1	4705	4705		30.318	2.4355	1	498070	+		12680	28157	8713	8721	14546	14546					0.017940367233904908
GQPSRAALRFY	11	Unmodified	_GQPSRAALRFY_					0	0	0			REV__nc|ENSG00000153707|P23468-2|PTPRD;REV__nc|ENSG00000153707|P23468-7|PTPRD	REV__nc|ENSG00000153707|P23468-2|PTPRD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3689575195312	2	633.341104	1264.66765	2.1436	0.0013576	-0.67868	-0.00042983	1.4649	0.00092777	633.3401311741566	97.23	0.11896	97.621	97.522	97.641	0.39065					4	2	2	0	0	0	0.17339	1	11713	11713		46.457	21.938	1	126510	+		12681	20354;29937	8714	8722	14547	14547					0.045907128945145814
GQRLKAGS	8	Unmodified	_GQRLKAGS_					0	0	0			REV__ENSG00000118491|ENST00000237275|ZC2HC1B	REV__ENSG00000118491|ENST00000237275|ZC2HC1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7389831542969	2	408.737951	815.46135	0.14715	6.0146E-05	4.0233	0.0016445	4.1704	0.0017046	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.82658	1	2039	2039		21.96	0.25755	1	1448600	+		12682	18315	8715	8723	14548	14548					0.04623764786038009
GQSGGCGEI	9	Unmodified	_GQSGGCGEI_					0	0	0			REV__ENST00000592940.2_1_19:1105716-1106094:+|nuORF	REV__ENST00000592940.2_1_19:1105716-1106094:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.17047119140625	2	404.16871	806.322867	-0.2371	-9.5827E-05	2.8329	0.001145	2.5958	0.0010491	404.170169463804	77.716	2.6143	78.284	77.489	80.104	0.56836					167	61	5	0	0	0	0.78058	1	8951	8951		30.504	1.3541	1	22410000	+		12683	29222	8716	8724	14549	14549					-0.08804146244597177
GQSPGDGRVWR	11	Unmodified	_GQSPGDGRVWR_					0	0	0		nc|ENSG00000160282|O95954-3|FTCD	nc|ENSG00000160282|O95954-3|FTCD	nc|ENSG00000160282|O95954-3|FTCD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5410461425781	3	405.539016	1213.59522	2.2598E-05	9.1643E-09	3.7173	0.0015075	3.7173	0.0015075	405.5404180707205	38.155	0.99045	38.127	37.774	38.765	-0.027843					51	22	3	0	0	0	0.66858	1	2547	2547		36.528	1.3759	1	420290			12684	15038	8717	8725	14550	14550					-0.003036211790458765
GQTFTCNV	8	Unmodified	_GQTFTCNV_					0	0	0		CON__ENSEMBL:ENSBTAP00000024466;CON__ENSEMBL:ENSBTAP00000024462	CON__ENSEMBL:ENSBTAP00000024466	CON__ENSEMBL:ENSBTAP00000024466	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.1981201171875	2	435.194728	868.374903	1.4332	0.00062371	3.1889	0.0013878	4.6221	0.0020115	435.19597064479416	100.15	0.74585	100.49	100.14	100.88	0.33295					31	18	2	0	0	0	0.89494	1	12126	12126		37.159	6.6555	1	420750		+	12685	569	8718	8726	14551	14551					-0.06454982830825884
GQTKSKSKLV	10	Unmodified	_GQTKSKSKLV_					0	0	0			REV__ENSG00000038219|ENST00000040738|BOD1L1	REV__ENSG00000038219|ENST00000040738|BOD1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3269653320312	2	538.327131	1074.63971	1.246	0.00067076	-1.73	-0.00093129	-0.48397	-0.00026053	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.86621	1	11086	11086		26.063	0.61321	1	76567000	+		12686	16300	8719	8727	14552	14552					0.10537389914406958
GQTKVLTQK	9	Unmodified	_GQTKVLTQK_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.8006591796875	2	501.800749	1001.58694	0.20392	0.00010233	-0.22624	-0.00011353	-0.022319	-1.12E-05	501.8004997164683	19.055	0.84258	18.578	18.311	19.153	-0.47694					49	18	4	0	0	0	2.4207E-08	2	462	462;476		158.07	47.955	1	898920			12687	8948	8720	8728	14553;14554	14553					0.08621431851611305
GQTKVLTQK	9	Unmodified	_GQTKVLTQK_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.80084228515625	2	501.800749	1001.58694	0.43303	0.00021729	-0.58117	-0.00029163	-0.14815	-7.4341E-05	501.8003359325483	19.27	0.85564	18.64	18.358	19.214	-0.6296					41	18	4	0	0	0	2.4207E-08	2	489	489;501		158.07	35.899	1	1045200			12688	8948	8720	8728	14555;14556	14555					0.08621431851611305
GQTQPEPL	8	Unmodified	_GQTQPEPL_					0	0	0		ENST00000446874.5_1_7:44068127-44068763:-|nuORF	ENST00000446874.5_1_7:44068127-44068763:-|nuORF	ENST00000446874.5_1_7:44068127-44068763:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2227478027344	2	435.2218	868.429047	1.1398	0.00049606	2.7676	0.0012045	3.9074	0.0017006	435.2228723544136	94.167	0.8138	94.599	94.344	95.158	0.4324					35	21	2	0	0	0	0.91977	1	11264	11264		45.952	3.5558	1	998480			12689	11841	8721	8729	14557	14557					-0.01043067407624676
GQTRVRGGG	9	Unmodified	_GQTRVRGGG_					0	0	0		ENST00000597275.5_1_X:48911115-48911331:+|nuORF	ENST00000597275.5_1_X:48911115-48911331:+|nuORF	ENST00000597275.5_1_X:48911115-48911331:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	444.2453918457031	2	444.243932	886.473312	4.6482	0.0020649	-2.372	-0.0010537	2.2762	0.0010112	444.2433981750653	107.05	1.0816	107.19	106.83	107.92	0.14929					101	39	5	0	0	0	0.62081	1	13087	13087		45.952	11.779	1	5789800			12690	14350	8722	8730	14558	14558					0.02553381529253329
GQTSAGCPS	9	Unmodified	_GQTSAGCPS_					0	0	0		ENSG00000175920|ENST00000340083|DOK7;nc|ENSG00000175920|Q18PE1-3|DOK7;nc|ENSG00000175920|Q18PE1-2|DOK7	ENSG00000175920|ENST00000340083|DOK7	ENSG00000175920|ENST00000340083|DOK7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.17120361328125	2	404.16871	806.322867	-0.18774	-7.5878E-05	3.363	0.0013592	3.1752	0.0012833	404.170229386983	78.542	2.4005	78.598	78.112	80.513	0.056114					177	77	5	0	0	0	0.78058	1	7741	7741		30.504	6.3009	1	6189200			12691	7045	8723	8731	14559	14559					-0.08804146244585809
GQTSAGCPS	9	Unmodified	_GQTSAGCPS_					0	0	0		ENSG00000175920|ENST00000340083|DOK7;nc|ENSG00000175920|Q18PE1-3|DOK7;nc|ENSG00000175920|Q18PE1-2|DOK7	ENSG00000175920|ENST00000340083|DOK7	ENSG00000175920|ENST00000340083|DOK7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.17041015625	2	404.16871	806.322867	2.4772	0.0010012	0.73353	0.00029647	3.2107	0.0012977	404.16914392538314	78.456	2.0058	78.508	78.086	80.092	0.051682					179	62	5	0	0	0	0.7932	1	7684	7684		25.574	0.12388	1	6709200			12692	7045	8723	8731	14560	14560					-0.08804146244585809
GQVFYNSEY	9	Unmodified	_GQVFYNSEY_					0	0	0		ENSG00000037280|ENST00000261937|FLT4;nc|ENSG00000037280|P35916-3|FLT4	ENSG00000037280|ENST00000261937|FLT4	ENSG00000037280|ENST00000261937|FLT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.7454223632812	2	553.743096	1105.47164	0.045187	2.5022E-05	2.9804	0.0016504	3.0256	0.0016754	553.7447127215363	55.215	0.58589	55.616	55.405	55.991	0.40101					27	13	3	0	0	0	0.15959	1	5654	5654		82.241	2.3013	1	668160			12693	907	8724	8732	14561	14561					-0.07687717070029976
GQVFYNSEY	9	Unmodified	_GQVFYNSEY_					0	0	0		ENSG00000037280|ENST00000261937|FLT4;nc|ENSG00000037280|P35916-3|FLT4	ENSG00000037280|ENST00000261937|FLT4	ENSG00000037280|ENST00000261937|FLT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.7442016601562	2	553.743096	1105.47164	-0.098199	-5.4377E-05	2.9205	0.0016172	2.8223	0.0015628	553.7446237932686	55.041	0.67183	55.609	55.278	55.95	0.56836					34	15	3	0	0	0	0.19953	1	5643	5643		73.975	13.681	1	684920			12694	907	8724	8732	14562	14562					-0.07687717070029976
GQVTRAPA	8	Unmodified	_GQVTRAPA_					0	0	0		ENST00000268154.8_1_15:90623238-90623484:+|nuORF	ENST00000268154.8_1_15:90623238-90623484:+|nuORF	ENST00000268154.8_1_15:90623238-90623484:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2267761230469	2	400.224677	798.434801	1.8836	0.00075385	2.9405	0.0011769	4.8241	0.0019307	400.22567128573456	34.872	1.5031	35.082	34.854	36.357	0.21003					89	38	3	0	0	0	0.92457	1	2663	2663		47.916	3.7988	1	1257500			12695	9536	8725	8733	14563	14563					0.02752075894693462
GQVVMYYL	8	Oxidation (M)	_GQVVM(Oxidation (M))YYL_		GQVVM(1)YYL		GQVVM(45)YYL	0	0	1			REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.74859619140625	2	494.744053	987.473554	-0.26414	-0.00013068	4.3087	0.0021317	4.0445	0.002001	494.746082748981	20.091	0.40257	20.021	19.863	20.266	-0.069735					27	15	2	0	0	0	0.9159	1	513	513		44.531	10.359	1	109920	+		12696	30005	8726	8734	14564	14564		439			-0.020683795857848963
GQVYALSKRR	10	Unmodified	_GQVYALSKRR_					0	0	0			REV__ENST00000544396.5_2_5:125759302-125807964:+|nuORF	REV__ENST00000544396.5_2_5:125759302-125807964:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.343017578125	2	589.343646	1176.67274	0.15554	9.1664E-05	-1.2615	-0.00074348	-1.106	-0.00065182	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.86698	1	11310	11310		28.081	2.5074	1	10540000	+		12697	28514	8727	8735	14565	14565					0.09147016757128767
GQVYLDGAN	9	Unmodified	_GQVYLDGAN_					0	0	0		ENSG00000178445|ENST00000321612|GLDC	ENSG00000178445|ENST00000321612|GLDC	ENSG00000178445|ENST00000321612|GLDC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.72265625	2	468.724707	935.43486	-0.94379	-0.00044238	-1.8848	-0.00088346	-2.8286	-0.0013258	468.7236903113572	85.734	0.90586	86.181	85.782	86.688	0.44736					54	21	3	0	0	0	0.76419	1	10046	10046		35.152	0.97948	1	829770			12698	7207	8728	8736	14566	14566					-0.03543968895962735
GQWSKAVRVVN	11	Unmodified	_GQWSKAVRVVN_					0	0	0			REV__ENSG00000130287|ENST00000252575|NCAN	REV__ENSG00000130287|ENST00000252575|NCAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3463745117188	2	622.348929	1242.6833	-0.2781	-0.00017307	-2.341	-0.0014569	-2.6191	-0.00163	622.3475674365299	96.114	2.8356	96.18	95.181	98.017	0.06591					140	66	3	0	0	0	0.6493	1	10068	10068		38.754	9.5835	1	306120	+		12699	18863	8729	8737	14567	14567					0.07166999411560937
GQYGNPLNK	9	Unmodified	_GQYGNPLNK_					0	0	0		ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;ENSG00000137845|ENST00000260408|ADAM10	ENST00000560608.5_1_15:58971480-59041769:-|nuORF	ENST00000560608.5_1_15:58971480-59041769:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.75335693359375	2	495.753798	989.493044	1.0414	0.0005163	1.3446	0.00066657	2.386	0.0011829	495.7546805747007	34.739	0.7539	35.121	34.689	35.443	0.3812					48	18	4	0	0	0	0.026451	3	2599	2591;2599;2613		120.62	51.834	1	3121900			12700	4241	8730	8738	14568;14569;14570	14569					-0.0021228725066748666
GQYTGSEGVV	10	Unmodified	_GQYTGSEGVV_					0	0	0		nc|ENSG00000183117|Q96PZ7-2|CSMD1;ENSG00000183117|ENST00000635120|CSMD1;nc|ENSG00000183117|Q96PZ7-4|CSMD1;nc|ENSG00000183117|Q96PZ7-3|CSMD1;ENST00000523387.5_1_8:2986336-3141840:-|nuORF;ENST00000523488.5_1_8:3008913-3253839:-|nuORF	nc|ENSG00000183117|Q96PZ7-2|CSMD1	nc|ENSG00000183117|Q96PZ7-2|CSMD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.7326354980469	2	498.735271	995.45599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.244	1	25.203	24.703	25.703	-0.04117								0	0	0	0.45132	1	1050	1050		49.442	7.0454	1				12701	7502	8731	8739	14571	14571					-0.04192003587081672
GRAAMQVSN	9	Unmodified	_GRAAMQVSN_					0	0	0			REV__ENST00000369651.7_1_6:86205012-86205186:+|nuORF	REV__ENST00000369651.7_1_6:86205012-86205186:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.2328186035156	2	467.232176	932.449799	-0.78556	-0.00036704	3.411	0.0015937	2.6254	0.0012267	467.2336097851308	69.799	1.6914	69.762	69.451	71.142	-0.036964					147	87	2	0	0	0	0.77244	1	6852	6852		32.812	2.9709	1	4050000	+		12702	25625	8732	8740	14572	14572					-0.019128002996012583
GRAANLLH	8	Unmodified	_GRAANLLH_					0	0	0			REV__ENSG00000198483|ENST00000355594|ANKRD35	REV__ENSG00000198483|ENST00000355594|ANKRD35	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2464599609375	2	426.245944	850.477334	0.55579	0.0002369	-0.29201	-0.00012447	0.26378	0.00011243	426.24575751127946	87.37	3.4516	87.816	85.746	89.198	0.44628					161	83	2	0	0	0	0.86288	2	10223	10223;10243		26.796	5.0938	1	2779100	+		12703	23332	8733	8741	14573;14574	14573					0.046114710229517186
GRAANLLH	8	Unmodified	_GRAANLLH_					0	0	0			REV__ENSG00000198483|ENST00000355594|ANKRD35	REV__ENSG00000198483|ENST00000355594|ANKRD35	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2460021972656	2	426.245944	850.477334	-0.71681	-0.00030554	0.86718	0.00036963	0.15037	6.4093E-05	426.24624802256477	87.382	3.0594	87.845	86.168	89.227	0.46312					121	74	2	0	0	0	0.86288	1	10272	10272		26.796	1.3459	1	3022100	+		12704	23332	8733	8741	14575	14575					0.046114710229517186
GRAGAAGPLGP	11	Unmodified	_GRAGAAGPLGP_					0	0	0			REV__CON__P04258	REV__CON__P04258	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	462.25518798828125	2	462.256508	922.498464	-1.1479	-0.0005306	-0.43284	-0.00020008	-1.5807	-0.00073069	462.2561316010427	50.7	0.93532	50.73	50.218	51.154	0.029629					48	30	3	0	0	0	0.68378	1	4002	4002		34.173	0.65696	1	309990	+	+	12705	15978	8734	8742	14576	14576					0.03411436331816731
GRAGFVLL	8	Unmodified	_GRAGFVLL_					0	0	0			REV__nc|ENSG00000162073|Q8N4S7-3|PAQR4	REV__nc|ENSG00000162073|Q8N4S7-3|PAQR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	416.7548828125	2	416.755613	831.496673	-1.2346	-0.00051453	0.0008669	3.6128E-07	-1.2337	-0.00051417	416.7554996796795	69.232	0.75401	69.298	68.944	69.698	0.065506					85	35	3	0	0	0	0.88915	1	6260	6260		35.201	5.3592	1	1082800	+		12706	20794	8735	8743	14577	14577					0.07418427313859866
GRAGPRHGGR	10	Unmodified	_GRAGPRHGGR_					0	0	0		ENST00000509330.5_1_6:64346386-64346665:+|nuORF	ENST00000509330.5_1_6:64346386-64346665:+|nuORF	ENST00000509330.5_1_6:64346386-64346665:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.7814636230469	2	510.781548	1019.54854	0.57365	0.00029301	1.8715	0.00095591	2.4451	0.0012489	510.78246923554457	26.283	0.78617	26.329	26.034	26.821	0.045507					43	21	3	0	0	0	0.46422	1	1102	1102		58.782	12.81	1	147580			12707	12986	8736	8744	14578	14578					0.039549837803292576
GRAKESTEIR	10	Unmodified	_GRAKESTEIR_					0	0	0		ENSG00000154479|ENST00000447353|CFAP210	ENSG00000154479|ENST00000447353|CFAP210	ENSG00000154479|ENST00000447353|CFAP210	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.81640625	2	573.814919	1145.61528	-0.60731	-0.00034849	4.1371	0.0023739	3.5298	0.0020255	573.8171546436936	36.254	0.9932	36.198	35.788	36.781	-0.055904					58	21	4	0	0	0	0.60985	1	2437	2437		49.536	18.006	1	727690			12708	5280	8737	8745	14579	14579					0.04830129760875934
GRALGKLH	8	Unmodified	_GRALGKLH_					0	0	0		ENSG00000104888|ENST00000221485|SLC17A7	ENSG00000104888|ENST00000221485|SLC17A7	ENSG00000104888|ENST00000221485|SLC17A7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.294677734375	2	426.264136	850.51372	-1.7311	-0.00073792	-0.55842	-0.00023803	-2.2896	-0.00097595	426.26448837035895	72.029	0.12181	72.161	72.105	72.227	0.13145					5	3	2	0	0	0	0.4196	1	6576	6576		37.028	3.5129	1	21925			12709	2162	8738	8746	14580	14580					0.08248347919652588
GRALHRRRQ	9	Unmodified	_GRALHRRRQ_					0	0	0		ENST00000368061.2_1_1:160388904-160390242:+|nuORF	ENST00000368061.2_1_1:160388904-160390242:+|nuORF	ENST00000368061.2_1_1:160388904-160390242:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.3456420898438	2	575.344846	1148.67514	0.61456	0.00035358	0.75377	0.00043368	1.3683	0.00078726	575.3451796941858	98.405	2.0882	98.633	98.17	100.26	0.22787					146	48	5	0	0	0	0.78536	1	10210	10210		29.15	1.2673	1	2884500			12710	10579	8739	8747	14581	14581					0.10674910005445781
GRALHRRRQ	9	Unmodified	_GRALHRRRQ_					0	0	0		ENST00000368061.2_1_1:160388904-160390242:+|nuORF	ENST00000368061.2_1_1:160388904-160390242:+|nuORF	ENST00000368061.2_1_1:160388904-160390242:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.3456420898438	2	575.344846	1148.67514	0.94019	0.00054093	1.0178	0.00058557	1.958	0.0011265	575.3454322863764	98.249	1.7248	98.634	98.18	99.904	0.38548					107	42	5	0	0	0	0.7932	1	11836	11836		23.042	0.46283	1	3140900			12711	10579	8739	8747	14582	14582					0.10674910005445781
GRALLPALW	9	Unmodified	_GRALLPALW_					0	0	0			REV__ENSG00000124574|ENST00000372530|ABCC10	REV__ENSG00000124574|ENST00000372530|ABCC10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8036804199219	2	498.803094	995.591636	-0.601	-0.00029978	1.7229	0.00085937	1.1219	0.00055959	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.7932	1	4502	4502		23.042	1.3402	1	2240900	+		12712	18595	8740	8748	14583	14583					0.09366360785031702
GRAPALGKA	9	Unmodified	_GRAPALGKA_					0	0	0			REV__ENSG00000121904|ENST00000373381|CSMD2	REV__ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.75421142578125	2	420.756144	839.497735	0.18337	7.7154E-05	-2.3767	-0.001	-2.1933	-0.00092286	420.7550318985828	22.352	1.7415	21.741	20.512	22.253	-0.6107					82	43	2	0	0	0	0.7932	1	836	836		21.96	0.25755	1	550570	+		12713	18472	8741	8749	14584	14584					0.07156641682740883
GRAPALPR	8	Unmodified	_GRAPALPR_					0	0	0			REV__ENST00000480582.1_1_7:150555040-150557681:+|nuORF	REV__ENST00000480582.1_1_7:150555040-150557681:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.29742431640625	2	419.256311	836.49807	-1.3191	-0.00055303	4.3029	0.001804	2.9839	0.001251	419.25932160942807	71.885	0.50243	71.965	71.713	72.216	0.080025					30	18	3	0	0	0	0.4196	1	6551	6551		47.916	0	1	70314	+		12714	27421	8742	8750	14585	14585					0.07328061402597541
GRAPHCAN	8	Unmodified	_GRAPHCAN_					0	0	0			REV__ENST00000373511.6_1_9:128200812-128200935:-|nuORF	REV__ENST00000373511.6_1_9:128200812-128200935:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.1938781738281	2	413.192854	824.371155	0.59534	0.00024599	0.90102	0.00037229	1.4964	0.00061828	413.1935207770106	85.383	2.6893	85.531	84.474	87.163	0.14857					153	62	4	0	0	0	0.87922	1	8337	8337		31.955	0	1	1731000	+		12715	25762	8743	8751	14586	14586					-0.04805607814034829
GRAPSHFK	8	Unmodified	_GRAPSHFK_					0	0	0			REV__ENST00000477287.1_1_20:2736199-2739622:+|nuORF	REV__ENST00000477287.1_1_20:2736199-2739622:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2582092285156	2	450.245944	898.477334	-0.60105	-0.00027062	4.0857	0.0018396	3.4847	0.001569	450.24765180514675	25.962	0.17466	25.704	25.638	25.813	-0.2572					5	3	2	0	0	0	0.4196	1	1384	1384		57.811	3.0466	1	111350	+		12716	16950	8744	8752	14587	14587					0.02403471022944359
GRAPSHFK	8	Unmodified	_GRAPSHFK_					0	0	0			REV__ENST00000477287.1_1_20:2736199-2739622:+|nuORF	REV__ENST00000477287.1_1_20:2736199-2739622:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	450.245944	898.477334	-0.3291	-0.00014818	2.3072	0.0010388	1.9781	0.00089063	450.2498665508027	25.64	0.47223	25.598	25.415	25.888	-0.04117	-0.090536	0.0016705	NaN	57.811	20	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14130	+		12717	16950	8744	8752							0.02403471022944359
GRAPSHFK	8	Unmodified	_GRAPSHFK_					0	0	0			REV__ENST00000477287.1_1_20:2736199-2739622:+|nuORF	REV__ENST00000477287.1_1_20:2736199-2739622:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	450.245944	898.477334	0.077473	3.4882E-05	-1.3748	-0.00061899	-1.2973	-0.0005841	450.2449467685222	25.801	0.082991	25.906	25.856	25.939	0.1054	0.217	-0.0016451	NaN	57.811	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13742	+		12718	16950	8744	8752							0.02403471022944359
GRAQRRPG	8	Unmodified	_GRAQRRPG_					0	0	0		ENST00000239223.3_1_5:172197224-172198187:-|nuORF	ENST00000239223.3_1_5:172197224-172198187:-|nuORF	ENST00000239223.3_1_5:172197224-172198187:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2617492675781	2	449.259917	896.50528	-1.3148	-0.0005907	2.7419	0.0012318	1.427	0.00064112	449.26091050300573	68.569	0.72878	68.705	68.381	69.11	0.13522					52	29	2	0	0	0	0.92457	1	6158	6158		47.916	5.5195	1	207860			12719	9244	8745	8753	14588	14588					0.052887940030473146
GRAQSMLNG	9	Unmodified	_GRAQSMLNG_					0	0	0			REV__ENST00000482800.5_1_3:57261911-57301862:+|nuORF	REV__ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.2333679199219	2	467.232176	932.449799	-1.3963	-0.0006524	4.1463	0.0019373	2.7499	0.0012849	467.23387854623877	68.403	0.92169	68.403	68.094	69.016	0					94	38	3	0	0	0	0.75725	1	6057	6057		36.447	1.246	1	339590	+		12720	20546	8746	8754	14589	14589					-0.019128002996012583
GRARAAHL	8	Unmodified	_GRARAAHL_					0	0	0			REV__ENST00000313766.5_7:193007-193082:+|nuORF	REV__ENST00000313766.5_7:193007-193082:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	426.2950439453125	2	426.25156	850.488568	-1.3648	-0.00058176	-1.7984	-0.00076659	-3.1633	-0.0013483	426.25116763765516	75.481	0.11553	75.481	75.414	75.53	0					6	3	2	0	0	0	0.4196	1	6834	6834		20.482	5.8177	1	19552	+		12721	24926	8747	8755	14590	14590					0.0573429311707514
GRARPESNTAP	11	Unmodified	_GRARPESNTAP_					0	0	0			REV__CON__REFSEQ:XP_932229	REV__CON__REFSEQ:XP_932229	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	578.3740844726562	2	578.296893	1154.57923	-0.41007	-0.00023714	-3.9067	-0.0022592	-4.3168	-0.0024964	578.2947010999692	50.554	0.28271	50.531	50.427	50.71	-0.02343					9	6	2	0	0	0	0.17275	1	4405	4405		27.047	6.1004	1	84305	+	+	12722	16035	8748	8756	14591	14591					0.00812672584061147
GRARRKTV	8	Unmodified	_GRARRKTV_					0	0	0		ENST00000481138.5_1_9:99614242-99615248:-|nuORF	ENST00000481138.5_1_9:99614242-99615248:-|nuORF	ENST00000481138.5_1_9:99614242-99615248:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2876892089844	2	472.299042	942.583531	-0.96582	-0.00045616	2.5978	0.0012269	1.632	0.00077078	472.30003681971516	96.111	0.25541	96.111	96.002	96.258	0					6	5	2	0	0	0	0.4196	1	9577	9577		23.042	0	1	24891			12723	12453	8749	8757	14592	14592					0.10994226588286438
GRARSAGF	8	Unmodified	_GRARSAGF_					0	0	0			REV__ENST00000588732.5_1_16:4853794-4854569:-|nuORF	REV__ENST00000588732.5_1_16:4853794-4854569:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	411.2187194824219	2	411.222469	820.430384	0.94508	0.00038864	-4.3321	-0.0017814	-3.387	-0.0013928	411.2196388652758	87.306	2.4467	87.232	85.148	87.595	-0.074005					79	56	3	0	0	0	0.81548	1	9038	9038		20.482	1.1219	1	231570	+		12724	29145	8750	8758	14593	14593					0.012986114718160024
GRAVHGVGV	9	Unmodified	_GRAVHGVGV_					0	0	0			REV__ENSG00000140807|ENST00000268459|NKD1	REV__ENSG00000140807|ENST00000268459|NKD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.2459411621094	2	426.245944	850.477334	-1.843	-0.00078557	2.1463	0.00091483	0.30326	0.00012926	426.2467741737408	87.495	4.0009	87.665	85.686	89.687	0.16922					180	93	4	0	0	0	0.7932	1	8573	8573		25.45	1.2474	1	3180100	+		12725	19642	8751	8759	14594	14594					0.04611471022963087
GRAVLAVWP	9	Unmodified	_GRAVLAVWP_					0	0	0			REV__ENSG00000163162|ENST00000295317|RNF149	REV__ENSG00000163162|ENST00000295317|RNF149	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.78363037109375	2	484.787444	967.560336	-1.8221	-0.00088333	2.0765	0.0010067	0.25438	0.00012332	484.787991301906	41.03	0.85788	41.664	41.496	42.354	0.6339					49	23	3	0	0	0	0.69914	1	3574	3574		40.573	5.3719	1	3425800	+		12726	20888	8752	8760	14595	14595					0.07525787750932977
GRAVLRSP	8	Unmodified	_GRAVLRSP_					0	0	0		ENSG00000244165|ENST00000321826|P2RY11	ENSG00000244165|ENST00000321826|P2RY11	ENSG00000244165|ENST00000321826|P2RY11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.1887512207031	2	428.261594	854.508634	-0.22764	-9.749E-05	0.34297	0.00014688	0.11533	4.9393E-05	428.2616214769592	92.799	1.5142	93.249	92.775	94.289	0.44989					77	35	3	0	0	0	0.4196	1	11209	11209		10.866	0.6003	1	406370			12727	8820	8753	8761	14596	14596					0.0755604405703707
GRAVNKGR	8	Unmodified	_GRAVNKGR_					0	0	0			REV__ENSG00000113805|ENST00000263665|CNTN3	REV__ENSG00000113805|ENST00000263665|CNTN3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.7497253417969	2	429.256843	856.499132	0.18512	7.9463E-05	3.5723	0.0015335	3.7575	0.0016129	429.25816019971234	39.859	0.51625	39.947	39.722	40.238	0.088375					18	12	2	0	0	0	0.4196	1	2510	2510		24.203	0	1	94710	+		12728	18015	8754	8762	14597	14597					0.06514275771519351
GRAVQGPGK	9	Unmodified	_GRAVQGPGK_					0	0	0		ENST00000355803.8_1_16:1376147-1376570:+|nuORF	ENST00000355803.8_1_16:1376147-1376570:+|nuORF	ENST00000355803.8_1_16:1376147-1376570:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2532958984375	2	435.251226	868.487899	-1.3354	-0.00058123	1.6938	0.00073721	0.35838	0.00015599	435.2518916713919	77.486	2.837	77.486	75.833	78.67	0					195	121	3	0	0	0	0.78536	1	6952	6952		29.15	6.1071	1	487350			12729	10356	8755	8763	14598	14598					0.04839453677391248
GRAVVGAGIGG	11	Unmodified	_GRAVVGAGIGG_					0	0	0		ENST00000505669.5_1_5:148737686-148748214:+|nuORF	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2618408203125	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.72918	1	7414	7414		26.693	1.2427	1	1032000			12730	12927	8756	8764	14599	14599					0.05435722848869773
GRAWRQGFL	9	Unmodified	_GRAWRQGFL_					0	0	0			REV__ENSG00000178171|ENST00000321420|AMER3	REV__ENSG00000178171|ENST00000321420|AMER3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3123779296875	2	545.798875	1089.5832	-1.131	-0.0006173	3.8727	0.0021137	2.7417	0.0014964	545.8009305222209	27.593	0.70166	27.496	27.228	27.929	-0.096947					26	15	2	0	0	0	0.20789	1	1598	1598		38.806	8.3025	1	291930	+		12731	22260	8757	8765	14600	14600					0.04198806868407701
GRCKAAKGTP	10	Unmodified	_GRCKAAKGTP_					0	0	0			REV__ENSG00000143387|ENST00000271651|CTSK	REV__ENSG00000143387|ENST00000271651|CTSK	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7730712890625	2	494.771468	987.528384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.703	1	21.638	21.138	22.138	-0.064743								0	0	0	0.45132	1	648	648		32.812	3.6629	1		+		12732	19804	8758	8766	14601	14601					0.03412052005467103
GRCRVNSTP	9	Unmodified	_GRCRVNSTP_					0	0	0		ENSG00000011114|ENST00000334746|BTBD7;nc|ENSG00000011114|Q9P203-5|BTBD7	ENSG00000011114|ENST00000334746|BTBD7	ENSG00000011114|ENST00000334746|BTBD7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2510986328125	2	495.2509	988.487247	-0.11961	-5.9238E-05	-0.71231	-0.00035277	-0.83192	-0.00041201	495.25043527980745	62.687	1.189	63.241	62.69	63.879	0.55449					64	27	3	0	0	0	0.71772	1	6720	6720		39.253	2.8061	1	341510			12733	780	8759	8767	14602	14602					-0.007457090339926253
GRCSFHLT	8	Carbamidomethyl (C)	_GRC(Carbamidomethyl (C))SFHLT_	GRC(1)SFHLT		GRC(44)SFHLT		0	1	0		ENST00000422956.6_1_2:114016893-114020997:+|nuORF	ENST00000422956.6_1_2:114016893-114020997:+|nuORF	ENST00000422956.6_1_2:114016893-114020997:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.2364196777344	2	489.234719	976.454884	-0.084852	-4.1512E-05	4.1276	0.0020194	4.0428	0.0019779	489.23659515743003	63.847	1.1575	63.846	63.508	64.665	-0.00078583					92	41	3	0	0	0	0.91472	1	5958	5958		44.117	6.9577	1	760060			12734	11491	8760	8768	14603	14603	146				-0.03428496436981732
GRCVRPRP	8	Unmodified	_GRCVRPRP_					0	0	0		ENST00000301618.8_1_17:74865029-74878335:+|nuORF	ENST00000301618.8_1_17:74865029-74878335:+|nuORF	ENST00000301618.8_1_17:74865029-74878335:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7662048339844	2	470.76652	939.518488	-1.9239	-0.00090572	1.2599	0.0005931	-0.66407	-0.00031262	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.87922	1	1411	1411		31.955	6.5047	1	93177			12735	9807	8761	8769	14604	14604					0.04630908790761623
GRDAPFSEPP	10	Unmodified	_GRDAPFSEPP_					0	0	0		ENSG00000047644|ENST00000380861|WWC3;nc|ENSG00000047644|Q9ULE0-2|WWC3	ENSG00000047644|ENST00000380861|WWC3	ENSG00000047644|ENST00000380861|WWC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.75634765625	2	536.756538	1071.49852	-0.28997	-0.00015564	1.1245	0.00060356	0.83449	0.00044792	536.7560248485332	37.771	0.7993	37.72	37.406	38.205	-0.050369					27	17	2	0	0	0	0.46422	1	2605	2605		58.782	0	1	301410			12736	966	8762	8770	14605	14605					-0.03436608458855517
GRDAPFSEPP	10	Unmodified	_GRDAPFSEPP_					0	0	0		ENSG00000047644|ENST00000380861|WWC3;nc|ENSG00000047644|Q9ULE0-2|WWC3	ENSG00000047644|ENST00000380861|WWC3	ENSG00000047644|ENST00000380861|WWC3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	536.7557373046875	2	536.756538	1071.49852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.847	1	37.858	37.358	38.358	0.011173								0	0	0	0.45132	1	2551	2551		37.812	2.6333	1				12737	966	8762	8770	14606	14606					-0.03436608458855517
GRDEGEPHQP	10	Unmodified	_GRDEGEPHQP_					0	0	0			REV__ENST00000252242.8_1_12:52913550-52913679:-|nuORF	REV__ENST00000252242.8_1_12:52913550-52913679:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.2576293945312	2	561.252151	1120.48975	-1.4473	-0.0008123	1.6031	0.00089975	0.15581	8.745E-05	561.2528152870863	30.947	0.47953	30.947	30.72	31.199	0					22	15	2	0	0	0	0.76096	1	1445	1445		41.427	12.257	1	47641	+		12738	24291	8763	8771	14607	14607					-0.06567582095317448
GRDEGEPHQP	10	Unmodified	_GRDEGEPHQP_					0	0	0			REV__ENST00000252242.8_1_12:52913550-52913679:-|nuORF	REV__ENST00000252242.8_1_12:52913550-52913679:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	561.252151	1120.48975	-0.86071	-0.00048307	0.86213	0.00048387	0.0014209	7.9749E-07	561.2524469977594	30.94	0.35213	30.959	30.813	31.165	0.01836	-0.024458	0.00012233	NaN	41.427	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27522	+		12739	24291	8763	8771							-0.06567582095317448
GRDEGEPHQP	10	Unmodified	_GRDEGEPHQP_					0	0	0			REV__ENST00000252242.8_1_12:52913550-52913679:-|nuORF	REV__ENST00000252242.8_1_12:52913550-52913679:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	561.252151	1120.48975	0.74798	0.00041981	-0.74086	-0.00041581	0.0071207	3.9965E-06	561.2513867330289	31.054	0.43173	31.043	30.75	31.182	-0.010656	0.060179	-0.001677	NaN	41.427	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35934	+		12740	24291	8763	8771							-0.06567582095317448
GRDFLSGALP	10	Unmodified	_GRDFLSGALP_					0	0	0		ENST00000597646.5_1_19:19021902-19030157:-|nuORF	ENST00000597646.5_1_19:19021902-19030157:-|nuORF	ENST00000597646.5_1_19:19021902-19030157:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.77783203125	2	516.777274	1031.53999	-1.0031	-0.00051839	0.65091	0.00033638	-0.3522	-0.00018201	516.777785348129	47.235	0.75013	48.158	47.871	48.622	0.92315					61	18	4	0	0	0	0.46422	1	4485	4485		58.782	2.0609	1	3052700			12741	14362	8764	8772	14608	14608					0.025485723004976535
GRDGVPGLV	9	Unmodified	_GRDGVPGLV_					0	0	0		nc|ENSG00000124749|Q96P44-2|COL21A1;ENST00000488912.5_1_6:55922457-55942902:-|nuORF;nc|ENSG00000124749|Q96P44-3|COL21A1;ENSG00000124749|ENST00000244728|COL21A1	nc|ENSG00000124749|Q96P44-2|COL21A1	nc|ENSG00000124749|Q96P44-2|COL21A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2455749511719	2	435.245609	868.476666	-0.74855	-0.0003258	0.65444	0.00028484	-0.094112	-4.0962E-05	435.2457494614933	47.227	1.0811	48.151	47.783	48.864	0.92315					74	26	4	0	0	0	0.22631	1	4495	4495		71.296	3.802	1	7740400			12742	3356	8765	8773	14609	14609					0.037166315832337204
GRDKEWLKS	9	Unmodified	_GRDKEWLKS_					0	0	0			REV__nc|ENSG00000121903|P17040-3|ZSCAN20	REV__nc|ENSG00000121903|P17040-3|ZSCAN20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	559.7989501953125	2	559.80128	1117.58801	-0.90376	-0.00050593	-1.7443	-0.00097646	-2.6481	-0.0014824	559.8002844162496	40.433	0.44452	40.389	40.183	40.627	-0.043697					24	10	3	0	0	0	0.66686	1	2965	2965		42.864	0	1	172340	+		12743	18471	8766	8774	14610	14610					0.033916462205070275
GRDLLFVFR	9	Unmodified	_GRDLLFVFR_					0	0	0			REV__nc|ENSG00000177731|Q13045-2|FLII	REV__nc|ENSG00000177731|Q13045-2|FLII	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.2869873046875	2	561.824558	1121.63456	0.10469	5.882E-05	1.4746	0.00082849	1.5793	0.00088731	561.8261815279274	67.84	0.12495	68.388	68.326	68.451	0.54819					4	2	2	0	0	0	0.20789	1	7468	7468		42.396	6.7778	1	85714	+		12744	22230	8767	8775	14611	14611					0.07861130842479724
GREAGYVEP	9	Unmodified	_GREAGYVEP_					0	0	0			REV__nc|ENSG00000189056|P78509-3|RELN	REV__nc|ENSG00000189056|P78509-3|RELN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.2368469238281	2	489.237981	976.461409	-0.77305	-0.00037821	-2.5786	-0.0012615	-3.3516	-0.0016398	489.23682963313604	63.081	1.9408	63.104	62.828	64.768	0.022984					241	80	5	0	0	0	0.74721	1	5500	5500		37.159	1.5408	1	3852300	+		12745	23061	8768	8776	14612	14612					-0.02776280004616183
GREAHRGRRR	10	Unmodified	_GREAHRGRRR_					0	0	0			REV__ENST00000495366.5_1_3:8675888-8681636:-|nuORF	REV__ENST00000495366.5_1_3:8675888-8681636:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.57470703125	3	417.573165	1249.69767	1.3349	0.00055741	4.3134	0.0018011	5.6482	0.0023586	417.5749239051732	21.566	1.4264	21.123	20.825	22.251	-0.44324					86	32	4	0	0	0	0.86218	1	872	872		30.569	0	1	1107100	+		12746	27736	8769	8777	14613	14613					0.08280509403061842
GREAKEEDLL	10	Unmodified	_GREAKEEDLL_					0	0	0			REV__ENSG00000135837|ENST00000367607|CEP350	REV__ENSG00000135837|ENST00000367607|CEP350	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.301513671875	2	580.30131	1158.58807	-1.0225	-0.00059338	1.173	0.00068072	0.1505	8.7338E-05	580.3018900215803	49.757	0.90461	50.205	49.694	50.599	0.44761					49	21	3	0	0	0	0.60985	1	4855	4855		49.536	0	1	2020100	+		12747	19256	8770	8778	14614	14614					0.0151160142986555
GREETKASLFP	11	Unmodified	_GREETKASLFP_					0	0	0			REV__ENST00000462790.7_1_19:19303039-19303273:-|nuORF	REV__ENST00000462790.7_1_19:19303039-19303273:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7460632324219	3	412.21906	1233.63535	0.58999	0.00024321	1.6192	0.00066749	2.2092	0.00091069	412.2203885558405	84.813	0.17271	84.961	84.863	85.036	0.14793					5	3	2	0	0	0	0.17302	1	8267	8267		33.039	17.033	1	21008	+		12748	27064	8771	8779	14615	14615					0.02787880700839196
GREKFKSRGV	10	Unmodified	_GREKFKSRGV_					0	0	0		ENSG00000234127|ENST00000454678|TRIM26	ENSG00000234127|ENST00000454678|TRIM26	ENSG00000234127|ENST00000454678|TRIM26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.33544921875	2	582.335821	1162.65709	-0.42207	-0.00024579	0.66388	0.0003866	0.2418	0.00014081	582.3360730171839	20.278	0.90201	19.648	19.305	20.207	-0.6296					47	19	4	0	0	0	0.73395	1	654	654		42.864	10.052	1	811170			12749	8743	8772	8780	14616	14616					0.0822673024008509
GRELAHLEDS	10	Unmodified	_GRELAHLEDS_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;nc|ENSG00000160305|Q14689-5|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.7774047851562	2	563.778002	1125.54145	-0.59695	-0.00033655	1.6958	0.00095604	1.0988	0.00061949	563.7782390832367	25.376	0.53678	25.427	25.113	25.649	0.050453					34	21	2	0	0	0	0.47091	1	1005	1005		58.23	10.573	1	65081			12750	5578	8773	8781	14617	14617					-0.01629838401413508
GRELAHLEDS	10	Unmodified	_GRELAHLEDS_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;nc|ENSG00000160305|Q14689-5|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	563.778002	1125.54145	0.18408	0.00010378	-0.36102	-0.00020353	-0.17694	-9.9752E-05	563.7768995724088	25.291	0.33668	25.396	25.161	25.498	0.1054	-0.20174	-0.00063317	NaN	58.23	20	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46867			12751	5578	8773	8781							-0.01629838401413508
GRELAHLEDS	10	Unmodified	_GRELAHLEDS_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;nc|ENSG00000160305|Q14689-5|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	563.778002	1125.54145	0.4451	0.00025094	-0.30685	-0.000173	0.13825	7.794E-05	563.7772116541481	26.105	0.35253	25.848	25.726	26.078	-0.2572	0.25024	-0.00057209	NaN	58.23	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52342			12752	5578	8773	8781							-0.01629838401413508
GRESLSLRGW	10	Unmodified	_GRESLSLRGW_					0	0	0		ENST00000348899.7_1_7:6769466-6769523:+|nuORF	ENST00000348899.7_1_7:6769466-6769523:+|nuORF	ENST00000348899.7_1_7:6769466-6769523:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.8096313476562	2	580.812179	1159.60981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.23	1	114.33	113.83	114.83	0.098114								0	0	0	0.45132	1	12228	12228		19.997	3.5236	1				12753	10317	8774	8782	14618	14618					0.03638450969083351
GREVGIKH	8	Unmodified	_GREVGIKH_					0	0	0		ENSG00000172748|ENST00000398612|ZNF596	ENSG00000172748|ENST00000398612|ZNF596	ENSG00000172748|ENST00000398612|ZNF596	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.26025390625	2	448.259051	894.503549	-1.3629	-0.00061094	1.4471	0.00064866	0.084131	3.7712E-05	448.2596556507269	89.763	2.6764	90.233	89.394	92.071	0.47068					116	66	2	0	0	0	0.86677	1	10651	10651		27.882	4.8398	1	2268200			12754	6789	8775	8783	14619	14619					0.05207740194418875
GREYNMDLY	9	Unmodified	_GREYNMDLY_					0	0	0		nc|ENSG00000151276|Q96QZ7-4|MAGI1;nc|ENSG00000151276|Q96QZ7-3|MAGI1;nc|ENSG00000151276|Q96QZ7-5|MAGI1;nc|ENSG00000151276|Q96QZ7-7|MAGI1;nc|ENSG00000151276|Q96QZ7-6|MAGI1;ENSG00000151276|ENST00000402939|MAGI1;nc|ENSG00000151276|Q96QZ7|MAGI1	nc|ENSG00000151276|Q96QZ7-4|MAGI1	nc|ENSG00000151276|Q96QZ7-4|MAGI1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	581.2922973632812	2	580.755681	1159.49681	-0.59362	-0.00034475	1.229	0.00071373	0.63534	0.00036898	580.7561047350549	36.434	1.0295	36.715	36.268	37.297	0.28173					66	24	4	0	0	0	0.20789	1	2908	2908		14.865	0	1	291670			12755	5104	8776	8784	14620	14620					-0.07655985539122412
GRFFNKLIN	9	Unmodified	_GRFFNKLIN_					0	0	0			REV__ENST00000511203.1_1_4:100869836-100870579:-|nuORF	REV__ENST00000511203.1_1_4:100869836-100870579:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.8079833984375	2	554.816733	1107.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.248	1	19.248	18.748	19.748	0								0	0	0	0.32159	1	394	394		23.042	1.0826	1		+		12756	27967	8777	8785	14621	14621					0.06940844325436046
GRGARGIH	8	Unmodified	_GRGARGIH_					0	0	0		ENST00000605833.1_1_10:17258201-17271901:-|nuORF	ENST00000605833.1_1_10:17258201-17271901:-|nuORF	ENST00000605833.1_1_10:17258201-17271901:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.1755065917969	2	412.23591	822.457268	2.1332	0.00087938	-2.8493	-0.0011746	-0.71609	-0.0002952	412.234043541788	94.942	0.3208	95.375	95.158	95.479	0.4324					12	7	3	0	0	0	0.4196	1	11332	11332		46.766	2.2354	1	83220			12757	14436	8778	8786	14622	14622					0.038937200829991525
GRGARVPS	8	Unmodified	_GRGARVPS_					0	0	0		ENSG00000189409|ENST00000356026|MMP23B;nc|ENSG00000189409|O75900-3|MMP23B;nc|ENSG00000189409|O75900-2|MMP23B	ENSG00000189409|ENST00000356026|MMP23B	ENSG00000189409|ENST00000356026|MMP23B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.22833251953125	2	400.230294	798.446034	-0.7523	-0.00030109	-3.6803	-0.001473	-4.4326	-0.0017741	400.2288641883786	54.868	1.9417	54.819	53.946	55.888	-0.049274					98	61	2	0	0	0	0.86677	1	4569	4569		27.882	0	1	1019300			12758	8006	8779	8787	14623	14623					0.038748979888509893
GRGGTVPVG	9	Unmodified	_GRGGTVPVG_					0	0	0		nc|ENSG00000166140|Q96K21-3|ZFYVE19;ENSG00000166140|ENST00000355341|ZFYVE19	nc|ENSG00000166140|Q96K21-3|ZFYVE19	nc|ENSG00000166140|Q96K21-3|ZFYVE19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2259826660156	2	400.224677	798.434801	1.1683	0.00046758	3.5853	0.0014349	4.7536	0.0019025	400.2259734207164	34.839	1.4569	35.22	34.977	36.434	0.3812					102	37	3	0	0	0	0.77546	1	2687	2687		31.955	2.8053	1	1604200			12759	6161	8780	8788	14624	14624					0.027520758947161994
GRGGVSAVP	9	Unmodified	_GRGGVSAVP_					0	0	0		ENSG00000134871|ENST00000360467|COL4A2	ENSG00000134871|ENST00000360467|COL4A2	ENSG00000134871|ENST00000360467|COL4A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2262268066406	2	400.224677	798.434801	1.8836	0.00075385	2.9405	0.0011769	4.8241	0.0019307	400.22567128573456	34.872	1.5031	35.082	34.854	36.357	0.21003					89	38	3	0	0	0	0.6204	1	2651	2651		45.972	3.5761	1	1257500			12760	3965	8781	8789	14625	14625					0.027520758947048307
GRGLGVFIL	9	Unmodified	_GRGLGVFIL_					0	0	0		ENST00000531909.5_1_11:124972643-124981459:-|nuORF	ENST00000531909.5_1_11:124972643-124981459:-|nuORF	ENST00000531909.5_1_11:124972643-124981459:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2891540527344	2	466.28982	930.565087	-0.42617	-0.00019872	0.52169	0.00024326	0.095514	4.4537E-05	466.2898922448067	74.098	1.2536	74.054	73.807	75.061	-0.043877					90	43	4	0	0	0	0.67235	1	7301	7301		42.474	3.6683	1	967050			12761	13368	8782	8790	14626	14626					0.09702671893705883
GRGLQPLKLDY	11	Unmodified	_GRGLQPLKLDY_					0	0	0		nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB;ENSG00000180900|ENST00000356994|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.5753479003906	3	420.575067	1258.70337	0.054208	2.2798E-05	0.93584	0.00039359	0.99005	0.00041639	420.5753673707218	47.088	0.73682	47.074	46.65	47.387	-0.013817					48	19	3	0	0	0	0.74771	1	3815	3815		22.562	0.87584	1	673640			12762	7356	8783	8791	14627	14627					0.08436750351506817
GRGLRVPN	8	Unmodified	_GRGLRVPN_					0	0	0			REV__ENST00000314485.11_2_1:160063696-160063849:-|nuORF	REV__ENST00000314485.11_2_1:160063696-160063849:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7596435546875	2	434.759218	867.503883	1.0426	0.00045328	-1.4353	-0.00062401	-0.39271	-0.00017073	434.7588689622068	87.637	3.2918	87.563	86.012	89.304	-0.073997					167	77	4	0	0	0	0.87479	1	9094	9094		30.504	5.0535	1	1572200	+		12763	24935	8784	8792	14628	14628					0.06483159914273529
GRGLRVPN	8	Unmodified	_GRGLRVPN_					0	0	0			REV__ENST00000314485.11_2_1:160063696-160063849:-|nuORF	REV__ENST00000314485.11_2_1:160063696-160063849:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7597961425781	2	434.759218	867.503883	2.1234	0.00092316	-2.3923	-0.0010401	-0.26887	-0.00011689	434.758413846185	87.485	3.2565	87.538	86.101	89.357	0.053024					140	76	4	0	0	0	0.87479	1	8941	8941		30.504	2.2494	1	1543500	+		12764	24935	8784	8792	14629	14629					0.06483159914273529
GRGLRVPN	8	Unmodified	_GRGLRVPN_					0	0	0			REV__ENST00000314485.11_2_1:160063696-160063849:-|nuORF	REV__ENST00000314485.11_2_1:160063696-160063849:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7596740722656	2	434.759218	867.503883	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.435	1	87.636	87.136	88.136	0.20114								0	0	0	0.29245	1	8635	8635		30.504	2.2494	1		+		12765	24935	8784	8792	14630	14630					0.06483159914273529
GRGLRVPN	8	Unmodified	_GRGLRVPN_					0	0	0			REV__ENST00000314485.11_2_1:160063696-160063849:-|nuORF	REV__ENST00000314485.11_2_1:160063696-160063849:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7598571777344	2	434.759218	867.503883	0.61638	0.00026798	-1.2568	-0.00054642	-0.64046	-0.00027845	434.7589702890546	87.554	3.2021	87.703	86.279	89.481	0.14956					123	75	2	0	0	0	0.87922	1	8637	8637		31.955	0	1	1373100	+		12766	24935	8784	8792	14631	14631					0.06483159914273529
GRGLTKGH	8	Unmodified	_GRGLTKGH_					0	0	0		ENST00000369842.8_1_X:153609573-153609861:+|nuORF	ENST00000369842.8_1_X:153609573-153609861:+|nuORF	ENST00000369842.8_1_X:153609573-153609861:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.23773193359375	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.86677	1	7737	7737		27.882	0	1	1747900			12767	10628	8785	8793	14632	14632					0.04243184505901354
GRGNVCVK	8	Unmodified	_GRGNVCVK_					0	0	0			REV__ENST00000563536.1_1_16:67218917-67219541:-|nuORF	REV__ENST00000563536.1_1_16:67218917-67219541:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.5757751464844	2	416.726529	831.438506	1.367	0.00056968	2.4135	0.0010058	3.7806	0.0015755	416.72671567943087	21.353	0.50041	20.91	20.78	21.28	-0.44324					16	11	2	0	0	0	0.4196	1	771	771		17.365	0	1	21254	+		12768	28819	8786	8794	14633	14633					0.01604422396917471
GRGPLMVN	8	Unmodified	_GRGPLMVN_					0	0	0		nc|ENSG00000110090|P50416-2|CPT1A;ENSG00000110090|ENST00000265641|CPT1A	nc|ENSG00000110090|P50416-2|CPT1A	nc|ENSG00000110090|P50416-2|CPT1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2283630371094	2	422.228905	842.443257	0.082015	3.4629E-05	-2.341	-0.00098845	-2.259	-0.00095382	422.22785524521964	58.566	1.4877	59.12	58.47	59.958	0.55323					63	36	2	0	0	0	0.87922	1	6194	6194		31.955	6.5047	1	468490			12769	2510	8787	8795	14634	14634					0.015733065396716484
GRGPPEPK	8	Unmodified	_GRGPPEPK_					0	0	0			REV__ENSG00000130487|ENST00000648057|KLHDC7B	REV__ENSG00000130487|ENST00000648057|KLHDC7B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.76434326171875	2	419.232502	836.450451	1.0282	0.00043105	-0.35327	-0.0001481	0.67493	0.00028295	419.2324303743865	33.053	0.4632	33.264	33.061	33.524	0.21168					21	10	3	0	0	0	0.4196	1	2402	2402		37.159	1.5408	1	90766	+		12770	18877	8788	8796	14635	14635					0.025683624117505133
GRGPRRAQRR	10	Unmodified	_GRGPRRAQRR_					0	0	0		ENST00000493668.1_1_X:9866192-9900301:+|nuORF	ENST00000493668.1_1_X:9866192-9900301:+|nuORF	ENST00000493668.1_1_X:9866192-9900301:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2329406738281	3	403.909777	1208.7075	2.8766	0.0011619	-3.2553	-0.0013149	-0.37877	-0.00015299	404.24279236981715	84.942	0.5658	85.001	84.849	85.415	0.05925					16	12	2	0	0	0	0.37624	1	8627	8627		14.694	0	1	69654			12771	12735	8789	8797	14636	14636					0.11149697408427528
GRGPTGRFPR	10	Unmodified	_GRGPTGRFPR_					0	0	0			REV__ENST00000553559.1_1_14:95999360-96001197:-|nuORF	REV__ENST00000553559.1_1_14:95999360-96001197:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.80859375	2	550.807231	1099.59991	-1.5149	-0.00083443	0.28901	0.00015919	-1.2259	-0.00067524	550.8072735830477	30.077	0.6332	30.077	29.793	30.426	0					50	19	3	0	0	0	0.86218	1	1326	1326		32.812	2.4947	1	258040	+		12772	28647	8790	8798	14637	14637					0.05409307754348447
GRGRSELCL	9	Unmodified	_GRGRSELCL_					0	0	0		nc|ENSG00000197256|Q63ZY3-3|KANK2;ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2;ENST00000590400.1_1_19:11303345-11305238:-|nuORF	nc|ENSG00000197256|Q63ZY3-3|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.26068115234375	2	495.761101	989.507648	-1.9425	-0.00096301	-0.60338	-0.00029913	-2.5459	-0.0012621	495.7602537576442	19.302	1.1114	19.302	18.834	19.945	0					76	43	2	0	0	0	0.76764	1	390	390		34.173	2.2177	1	56551			12773	8148	8791	8799	14638	14638					0.012474616258145943
GRGRTPRPA	9	Unmodified	_GRGRTPRPA_					0	0	0		ENST00000422163.5_1_3:50263823-50264024:+|nuORF	ENST00000422163.5_1_3:50263823-50264024:+|nuORF	ENST00000422163.5_1_3:50263823-50264024:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2378234863281	2	484.280849	966.547145	-0.40408	-0.00019569	3.9271	0.0019018	3.5231	0.0017062	484.2815607709682	77.495	0.21577	78.063	77.923	78.139	0.56835					6	4	2	0	0	0	0.20789	1	8850	8850		26.693	6.2111	1	49493			12774	11476	8792	8800	14639	14639					0.06253349691553467
GRGVAKAQGP	10	Unmodified	_GRGVAKAQGP_					0	0	0			REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.768798828125	2	470.769783	939.525013	0.3235	0.00015229	-1.7498	-0.00082374	-1.4263	-0.00067145	470.7688399761902	50.705	1.3688	50.755	50.372	51.741	0.049896					94	42	3	0	0	0	0.8608	1	3982	3982		34.173	0	1	1304900	+		12775	24288	8793	8801	14640	14640					0.052831252231385406
GRGVLPGR	8	Unmodified	_GRGVLPGR_					0	0	0		ENST00000303212.2_1_19:5824142-5828303:+|nuORF	ENST00000303212.2_1_19:5824142-5828303:+|nuORF	ENST00000303212.2_1_19:5824142-5828303:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2489929199219	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.9	1	116.88	116.38	117.38	-0.02433								0	0	0	0.3037	1	12948	12948		18.324	4.5491	1				12776	9827	8794	8802	14641	14641					0.06959774885569914
GRGVPHLPPGR	11	Unmodified	_GRGVPHLPPGR_					0	0	0		ENST00000567636.1_1_18:30092208-30092496:+|nuORF	ENST00000567636.1_1_18:30092208-30092496:+|nuORF	ENST00000567636.1_1_18:30092208-30092496:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.8273315429688	2	571.830706	1141.64686	1.7147	0.00098053	-0.55853	-0.00031938	1.1562	0.00066114	571.8291964982999	35.378	0.56936	35.759	35.52	36.09	0.3812					24	14	2	0	0	0	0.17574	1	2699	2699		41.427	20.48	1	201280			12777	13950	8795	8803	14642	14642					0.08170167305524956
GRGVPLRG	8	Unmodified	_GRGVPLRG_					0	0	0		ENST00000341865.8_1_6:42073427-42073679:-|nuORF	ENST00000341865.8_1_6:42073427-42073679:-|nuORF	ENST00000341865.8_1_6:42073427-42073679:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.17620849609375	2	406.248486	810.48242	0.66969	0.00027206	-3.1502	-0.0012798	-2.4805	-0.0010077	406.247013750327	96.485	0.12714	96.889	96.792	96.919	0.40451					4	2	2	0	0	0	0.4196	1	11606	11606		18.324	9.5021	1	42757			12778	10253	8796	8804	14643	14643					0.06959774885569914
GRGVPLRG	8	Unmodified	_GRGVPLRG_					0	0	0		ENST00000341865.8_1_6:42073427-42073679:-|nuORF	ENST00000341865.8_1_6:42073427-42073679:-|nuORF	ENST00000341865.8_1_6:42073427-42073679:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.248486	810.48242	2.0808	0.00084531	-7.2471	-0.0029441	-5.1664	-0.0020988	406.2447291652704	97.101	1.6228	97.045	95.938	97.561	-0.055542	0.00016919	-0.0010643	NaN	12.207	52	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80184			12779	10253	8796	8804							0.06959774885569914
GRGVPLRG	8	Unmodified	_GRGVPLRG_					0	0	0		ENST00000341865.8_1_6:42073427-42073679:-|nuORF	ENST00000341865.8_1_6:42073427-42073679:-|nuORF	ENST00000341865.8_1_6:42073427-42073679:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.248486	810.48242	3.1798	0.0012918	-6.9486	-0.0028229	-3.7689	-0.0015311	406.2450692385012	97.153	1.3944	97.201	96.312	97.706	0.048157	0.15601	-0.00082173	NaN	12.207	46	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103920			12780	10253	8796	8804							0.06959774885569914
GRHENSDLVLQ	11	Unmodified	_GRHENSDLVLQ_					0	0	0		ENSG00000142621|ENST00000688493|FHAD1;nc|ENSG00000142621|B1AJZ9-4|FHAD1;nc|ENSG00000142621|B1AJZ9|FHAD1;nc|ENSG00000142621|B1AJZ9-3|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3253173828125	2	634.323108	1266.63166	-0.14098	-8.9429E-05	3.2434	0.0020574	3.1024	0.001968	634.325157778093	59.492	2.055	59.479	58.833	60.888	-0.013729					119	56	4	0	0	0	0.14238	2	5475	5475;5497		82.75	7.7072	1	2671900			12781	4576	8797	8805	14644;14645	14644					0.009012109269860957
GRHENSDLVLQ	11	Unmodified	_GRHENSDLVLQ_					0	0	0		ENSG00000142621|ENST00000688493|FHAD1;nc|ENSG00000142621|B1AJZ9-4|FHAD1;nc|ENSG00000142621|B1AJZ9|FHAD1;nc|ENSG00000142621|B1AJZ9-3|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3253173828125	2	634.323108	1266.63166	-0.87571	-0.00055548	4.2238	0.0026793	3.3481	0.0021238	634.3257216778103	57.323	1.5327	57.717	57.284	58.816	0.39407					110	37	5	0	0	0	0.31387	2	5969	5953;5969		72.879	5.3856	1	4993700			12782	4576	8797	8805	14646;14647	14647					0.009012109269860957
GRHENSDLVLQ	11	Unmodified	_GRHENSDLVLQ_					0	0	0		ENSG00000142621|ENST00000688493|FHAD1;nc|ENSG00000142621|B1AJZ9-4|FHAD1;nc|ENSG00000142621|B1AJZ9|FHAD1;nc|ENSG00000142621|B1AJZ9-3|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3255615234375	2	634.323108	1266.63166	1.6756	0.0010629	1.7462	0.0011077	3.4218	0.0021705	634.3241495458176	57.188	1.611	57.743	57.355	58.966	0.55512					111	39	4	0	0	0	0.14238	3	5946	5946;5958;5972		82.75	1.1886	1	5227300			12783	4576	8797	8805	14648;14649;14650	14648					0.009012109269860957
GRHICPAG	8	Unmodified	_GRHICPAG_					0	0	0		ENST00000502559.1_1_4:8237989-8238388:+|nuORF;ENST00000506360.5_1_4:8234964-8238388:+|nuORF	ENST00000502559.1_1_4:8237989-8238388:+|nuORF	ENST00000502559.1_1_4:8237989-8238388:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.20489501953125	2	405.705597	809.396641	-1.8338	-0.00074399	3.2241	0.0013081	1.3903	0.00056406	405.70683116102214	77.589	0.91622	77.714	77.302	78.218	0.12485					58	36	2	0	0	0	0.4196	1	7288	7288		8.8223	0	1	48264			12784	12856	8798	8806	14651	14651					-0.015681332916074098
GRHLAEAVR	9	Unmodified	_GRHLAEAVR_					0	0	0			REV__nc|ENSG00000151914|Q03001-3|DST	REV__nc|ENSG00000151914|Q03001-3|DST	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.2641906738281	2	504.788507	1007.56246	0.86654	0.00043742	-0.62473	-0.00031536	0.24181	0.00012206	504.7878381470288	17.554	0.27283	16.943	16.798	17.071	-0.6107					9	6	2	0	0	0	0.20789	1	292	292		18.262	6.0552	1	39550	+		12785	29932	8799	8807	14652	14652					0.058982164887424915
GRHLLHQH	8	Unmodified	_GRHLLHQH_					0	0	0		ENST00000372429.7_1_9:132637899-132641867:+|nuORF	ENST00000372429.7_1_9:132637899-132641867:+|nuORF	ENST00000372429.7_1_9:132637899-132641867:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	499.26678466796875	2	499.275567	996.53658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.155	1	75.243	74.743	75.743	0.087631								0	0	0	0.29703	1	6949	6949		37.159	3.6435	1				12786	10699	8800	8808	14653	14653					0.038173670371293156
GRHLLVVF	8	Unmodified	_GRHLLVVF_					0	0	0			REV__ENST00000369567.5_1_1:114438593-114438920:-|nuORF	REV__ENST00000369567.5_1_1:114438593-114438920:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7889099121094	2	470.789987	939.565421	0.22344	0.00010519	0.15694	7.3886E-05	0.38038	0.00017908	470.78980973205034	44.363	1.3298	44.34	43.809	45.139	-0.023079					53	30	2	0	0	0	0.86288	1	3434	3434		26.796	5.0938	1	151650	+		12787	25623	8801	8809	14654	14654					0.09322091613569228
GRHRPVRP	8	Unmodified	_GRHRPVRP_					0	0	0		ENST00000355280.10_1_17:4736715-4781628:+|nuORF	ENST00000355280.10_1_17:4736715-4781628:+|nuORF	ENST00000355280.10_1_17:4736715-4781628:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79095458984375	2	487.791384	973.568215	-1.3135	-0.00064074	-0.26427	-0.00012891	-1.5778	-0.00076965	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.85277	1	8785	8785		25.45	3.4903	1	2239000			12788	10350	8802	8810	14655	14655					0.0803735979106932
GRIGRGTGN	9	Unmodified	_GRIGRGTGN_					0	0	0		ENST00000335211.8_1_1:201166433-201168754:+|nuORF	ENST00000335211.8_1_1:201166433-201168754:+|nuORF	ENST00000335211.8_1_1:201166433-201168754:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	444.2453308105469	2	444.243932	886.473312	4.6482	0.0020649	-2.372	-0.0010537	2.2762	0.0010112	444.2433981750653	107.05	1.0816	107.19	106.83	107.92	0.14929					101	39	5	0	0	0	0.75725	2	13075	13075;13111		36.447	0.82846	1	5789800			12789	10154	8803	8811	14656;14657	14656					0.025533815292305917
GRIGRVGPE	9	Unmodified	_GRIGRVGPE_					0	0	0			REV__ENSG00000240654|ENST00000332018|C1QTNF9	REV__ENSG00000240654|ENST00000332018|C1QTNF9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7691345214844	2	470.769783	939.525013	-1.6346	-0.00076952	0.1281	6.0304E-05	-1.5065	-0.00070922	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.55097	1	4043	4043		49.442	0	1	1359900	+		12790	23581	8804	8812	14658	14658					0.052831252231385406
GRIGRVGPE	9	Unmodified	_GRIGRVGPE_					0	0	0			REV__ENSG00000240654|ENST00000332018|C1QTNF9	REV__ENSG00000240654|ENST00000332018|C1QTNF9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.768310546875	2	470.769783	939.525013	-1.6002	-0.00075333	-0.071841	-3.3821E-05	-1.6721	-0.00078715	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.76255	2	4500	4429;4500		35.618	1.3713	1	1490800	+		12791	23581	8804	8812	14659;14660	14660					0.052831252231385406
GRIGRVGPE	9	Unmodified	_GRIGRVGPE_					0	0	0			REV__ENSG00000240654|ENST00000332018|C1QTNF9	REV__ENSG00000240654|ENST00000332018|C1QTNF9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7687072753906	2	470.769783	939.525013	-1.0178	-0.00047915	-1.0022	-0.0004718	-2.02	-0.00095095	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.78983	1	4430	4430		27.882	1.1893	1	1648400	+		12792	23581	8804	8812	14661	14661					0.052831252231385406
GRIGRVGPE	9	Unmodified	_GRIGRVGPE_					0	0	0			REV__ENSG00000240654|ENST00000332018|C1QTNF9	REV__ENSG00000240654|ENST00000332018|C1QTNF9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7691345214844	2	470.769783	939.525013	-0.38802	-0.00018267	-0.92797	-0.00043686	-1.316	-0.00061953	470.76920559370467	50.764	1.147	50.672	50.317	51.464	-0.091797					76	32	3	0	0	0	0.38563	1	4005	4005		58.782	9.3404	1	1480000	+		12793	23581	8804	8812	14662	14662					0.052831252231385406
GRIGRVGPE	9	Unmodified	_GRIGRVGPE_					0	0	0			REV__ENSG00000240654|ENST00000332018|C1QTNF9	REV__ENSG00000240654|ENST00000332018|C1QTNF9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7687072753906	2	470.769783	939.525013	0.25998	0.00012239	-1.8077	-0.000851	-1.5477	-0.00072861	470.7687399956873	50.307	1.239	50.754	50.307	51.546	0.4476					93	29	5	0	0	0	0.41566	1	5058	5058		56.721	7.2795	1	9098100	+		12794	23581	8804	8812	14663	14663					0.052831252231385406
GRIIPLTQS	9	Unmodified	_GRIIPLTQS_					0	0	0			REV__nc|ENSG00000135905|Q96BY6-3|DOCK10	REV__nc|ENSG00000135905|Q96BY6-3|DOCK10	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.7958984375	2	492.795466	983.57638	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.27	1	110.39	109.89	110.89	0.11659								0	0	0	0.31437	1	11867	11867		25.574	1.3713	1		+		12795	19264	8805	8813	14664	14664					0.08393449197183145
GRIKTFSQS	9	Unmodified	_GRIKTFSQS_					0	0	0		nc|ENSG00000133863|Q9BXT5|TEX15;ENSG00000133863|ENST00000643185|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.28173828125	2	512.282723	1022.55089	0.68771	0.0003523	-3.3979	-0.0017407	-2.7102	-0.0013884	512.280910573943	86.397	3.3825	86.546	85.297	88.68	0.14902					148	79	2	0	0	0	0.76419	1	8560	8560		35.152	3.1972	1	371240			12796	3897	8806	8814	14665	14665					0.04051974674769099
GRILKIHRN	9	Unmodified	_GRILKIHRN_					0	0	0		nc|ENSG00000172943|Q9UPP1-3|PHF8;nc|ENSG00000172943|Q9UPP1|PHF8;nc|ENSG00000172943|Q9UPP1-4|PHF8;ENSG00000172943|ENST00000338154|PHF8	nc|ENSG00000172943|Q9UPP1-3|PHF8	nc|ENSG00000172943|Q9UPP1-3|PHF8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8301391601562	2	553.848899	1105.68324	2.048	0.0011343	-3.435	-0.0019025	-1.387	-0.00076821	553.8467940848672	91.044	0.19646	90.977	90.839	91.036	-0.067085					6	4	2	0	0	0	0.20789	1	9564	9564		21.96	2.8564	1	41345			12797	15099	8807	8815	14666	14666					0.13463044202217134
GRILRTTSA	9	Unmodified	_GRILRTTSA_					0	0	0			REV__ENST00000480321.1_1_13:113698888-113699212:+|nuORF	REV__ENST00000480321.1_1_13:113698888-113699212:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7907409667969	2	487.790715	973.566878	-0.085473	-4.1693E-05	-0.089202	-4.3512E-05	-0.17467	-8.5205E-05	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.7932	1	8530	8530		26.693	1.1189	1	1889700	+		12798	27413	8808	8816	14667	14667					0.07903680911636002
GRILRTTSA	9	Unmodified	_GRILRTTSA_					0	0	0			REV__ENST00000480321.1_1_13:113698888-113699212:+|nuORF	REV__ENST00000480321.1_1_13:113698888-113699212:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79095458984375	2	487.790715	973.566878	-1.5393	-0.00075085	1.3207	0.00064423	-0.21857	-0.00010661	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.7932	1	8032	8032		25.574	4.6271	1	1760400	+		12799	27413	8808	8816	14668	14668					0.07903680911636002
GRIPALPPPVF	11	Unmodified	_GRIPALPPPVF_					0	0	0			REV__nc|ENSG00000150527|Q96PC5-8|MIA2;REV__ENSG00000212710|ENST00000391403|CTAGE1	REV__ENSG00000212710|ENST00000391403|CTAGE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3530883789062	2	582.350409	1162.68626	3.1803	0.0018521	1.9439	0.001132	5.1242	0.0029841	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.61774	3	11560	11560;11646;11801		42.396	8.2236	1	77008000	+		12800	29928;23602	8809	8817	14669;14670;14671	14669					0.1114287453635825
GRIPKKLKKPI	11	Unmodified	_GRIPKKLKKPI_					0	0	0			REV__ENST00000289081.7_1_9:98011544-98079973:-|nuORF	REV__ENST00000289081.7_1_9:98011544-98079973:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.20172119140625	3	426.630847	1276.87071	0.22734	9.699E-05	-0.34742	-0.00014822	-0.12008	-5.123E-05	426.63065889818813	81.514	1.2917	82.014	81.05	82.342	0.49967					55	31	2	0	0	0	0.181	1	9464	9464		9.2118	0	1	158340	+		12801	24651	8810	8818	14672	14672					0.24335062686941455
GRIQIVTDSA	10	Unmodified	_GRIQIVTDSA_					0	0	0		ENST00000475707.5_1_3:15045421-15079667:+|nuORF;ENSG00000177463|ENST00000425241|NR2C2;nc|ENSG00000177463|P49116-2|NR2C2	ENST00000475707.5_1_3:15045421-15079667:+|nuORF	ENST00000475707.5_1_3:15045421-15079667:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2939453125	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.73395	1	8907	8907		42.864	0.46813	1	1390700			12802	7142	8811	8819	14673	14673					0.045079399836367884
GRIQSILNG	9	Unmodified	_GRIQSILNG_					0	0	0			REV__ENST00000559816.1_1_15:50534459-50545113:-|nuORF	REV__ENST00000559816.1_1_15:50534459-50545113:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2778015136719	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.7932	1	8085	8085		23.523	1.5628	1	2046100	+		12803	19605	8812	8820	14674	14674					0.06031992020336929
GRISITPR	8	Unmodified	_GRISITPR_					0	0	0			REV__ENSG00000100991|ENST00000252015|TRPC4AP	REV__ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2746276855469	2	450.274701	898.534849	0.49619	0.00022342	-0.76811	-0.00034586	-0.27192	-0.00012244	450.2742908789494	92.742	1.9986	93.189	92.476	94.475	0.44661					184	49	6	0	0	0	0.8537	2	11099	11004;11099		39.253	3.6345	1	16577000	+		12804	17234	8813	8821	14675;14676	14676					0.08152313228515595
GRISIVKSN	9	Unmodified	_GRISIVKSN_					0	0	0		ENSG00000198185|ENST00000692313|ZNF334	ENSG00000198185|ENST00000692313|ZNF334	ENSG00000198185|ENST00000692313|ZNF334	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.2929382324219	2	487.293091	972.571629	-0.95487	-0.0004653	1.1127	0.0005422	0.1578	7.6897E-05	487.2935206291715	91.355	2.0771	91.355	90.861	92.938	0					114	48	4	0	0	0	0.7932	1	8929	8929		26.693	1.1189	1	1437600			12805	8251	8814	8822	14677	14677					0.08424565054428967
GRIVEGLKF	9	Unmodified	_GRIVEGLKF_					0	0	0		ENSG00000188906|ENST00000298910|LRRK2;ENST00000479187.5_1_12:40692272-40758932:+|nuORF	ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.80364990234375	2	509.805834	1017.59712	0.075306	3.8391E-05	-4.2119	-0.0021473	-4.1366	-0.0021089	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.78983	1	8618	8618		27.882	1.1893	1	958280			12806	7971	8815	8823	14678	14678					0.08902039576844345
GRIVEGLKF	9	Unmodified	_GRIVEGLKF_					0	0	0		ENSG00000188906|ENST00000298910|LRRK2;ENST00000479187.5_1_12:40692272-40758932:+|nuORF	ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8034973144531	2	509.805834	1017.59712	-1.4574	-0.000743	-2.7703	-0.0014123	-4.2277	-0.0021553	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.7932	1	8069	8069		21.96	1.4781	1	920080			12807	7971	8815	8823	14679	14679					0.08902039576844345
GRIVHLSN	8	Unmodified	_GRIVHLSN_					0	0	0		ENSG00000038210|ENST00000264864|PI4K2B	ENSG00000038210|ENST00000264864|PI4K2B	ENSG00000038210|ENST00000264864|PI4K2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.25933837890625	2	448.259051	894.503549	0.30626	0.00013729	-0.27451	-0.00012305	0.031752	1.4233E-05	448.2588270898945	89.76	2.8105	90.21	89.202	92.013	0.45058					113	70	4	0	0	0	0.87792	1	10620	10620		31.53	4.8369	1	1731800			12808	912	8816	8824	14680	14680					0.05207740194418875
GRIVVKTSAS	10	Unmodified	_GRIVVKTSAS_					0	0	0			REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.3058776855469	2	509.306198	1016.59784	0.38214	0.00019463	-1.238	-0.0006305	-0.85582	-0.00043587	509.30545060509706	93	1.7659	93.046	92.369	94.135	0.045448					129	41	4	0	0	0	0.86471	1	9711	9711		30.318	2.4355	1	3009900	+		12809	16218	8817	8825	14681	14681					0.09020834225907493
GRIVVKTSAS	10	Unmodified	_GRIVVKTSAS_					0	0	0			REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.30584716796875	2	509.306198	1016.59784	0.74223	0.00037802	-1.438	-0.00073237	-0.69576	-0.00035435	509.305324720209	92.968	1.4156	93.127	92.667	94.082	0.15875					103	33	4	0	0	0	0.73395	1	9478	9478		42.864	13.715	1	2131200	+		12810	16218	8817	8825	14682	14682					0.09020834225907493
GRIVVKTSAS	10	Unmodified	_GRIVVKTSAS_					0	0	0			REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.3061218261719	2	509.306198	1016.59784	-1.5847	-0.00080708	0.89267	0.00045464	-0.692	-0.00035244	509.30651405671495	92.924	1.4274	93.116	92.648	94.076	0.19238					107	33	5	0	0	0	0.86698	1	9389	9389		28.081	0.19925	1	2014700	+		12811	16218	8817	8825	14683	14683					0.09020834225907493
GRIYPDVII	9	Unmodified	_GRIYPDVII_					0	0	0		ENSG00000205301|ENST00000511113|MGAT4D	ENSG00000205301|ENST00000511113|MGAT4D	ENSG00000205301|ENST00000511113|MGAT4D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.305667	1044.59678	-0.79828	-0.00041774	-3.1608	-0.0016541	-3.9591	-0.0020718	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.77244	1	8742	8742		32.812	0	1	9288900			12812	8521	8818	8826	14684	14684					0.0762661985700106
GRKDVQKTG	9	Unmodified	_GRKDVQKTG_					0	0	0		ENSG00000177992|ENST00000325643|SPATA31E1	ENSG00000177992|ENST00000325643|SPATA31E1	ENSG00000177992|ENST00000325643|SPATA31E1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7801818847656	2	494.780348	987.546142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.814	1	86.963	86.463	87.463	0.14902								0	0	0	0.29796	1	8555	8555		31.53	1.2121	1				12813	7173	8819	8827	14685	14685					0.05187090532001548
GRKGGRKRKR	10	Unmodified	_GRKGGRKRKR_					0	0	0			REV__ENST00000281708.8_1_4:153456099-153456309:-|nuORF	REV__ENST00000281708.8_1_4:153456099-153456309:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.26263427734375	3	400.262039	1197.76429	0.012693	5.0806E-06	0.45783	0.00018325	0.47052	0.00018833	400.26217392962513	15.62	0.22285	15.677	15.548	15.771	0.057872					7	5	2	0	0	0	0.86551	1	55	55		14.694	1.1857	1	93853	+		12814	24608	8820	8828	14686	14686					0.17331744964963036
GRKKACGEP	9	Unmodified	_GRKKACGEP_					0	0	0		ENSG00000158863|ENST00000289921|FHIP2B	ENSG00000158863|ENST00000289921|FHIP2B	ENSG00000158863|ENST00000289921|FHIP2B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.84332275390625	2	473.250369	944.486184	-0.75152	-0.00035566	-2.8907	-0.001368	-3.6422	-0.0017237	473.24804630390827	36.233	1.0837	36.177	35.34	36.424	-0.055904					45	23	3	0	0	0	0.20789	1	2348	2348		19.997	3.5236	1	74474			12815	5501	8821	8829	14687	14687					0.011720765971062974
GRKKKETQG	9	Unmodified	_GRKKKETQG_					0	0	0		ENST00000519935.1_1_7:27209203-27211037:+|nuORF	ENST00000519935.1_1_7:27209203-27211037:+|nuORF	ENST00000519935.1_1_7:27209203-27211037:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3009033203125	2	516.301447	1030.58834	0.13063	6.7444E-05	-1.9515	-0.0010076	-1.8209	-0.00094013	516.3012953413697	57.209	1.6001	57.18	56.732	58.332	-0.028664					105	45	4	0	0	0	0.55097	1	5258	5258		49.442	11.63	1	661070			12816	13149	8822	8830	14688	14688					0.07427065940350985
GRKLCRRDYLR	11	Carbamidomethyl (C)	_GRKLC(Carbamidomethyl (C))RRDYLR_	GRKLC(1)RRDYLR		GRKLC(47)RRDYLR		0	1	0		nc|ENSG00000135363|P25791|LMO2;ENST00000464025.5_1_11:33880904-33886446:-|nuORF;ENSG00000135363|ENST00000257818|LMO2	nc|ENSG00000135363|P25791|LMO2	nc|ENSG00000135363|P25791|LMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.282470703125	3	498.280771	1491.82048	0.79888	0.00039807	2.8548	0.0014225	3.6537	0.0018206	498.2822081602194	32.887	0.92827	33.099	32.723	33.651	0.21168					67	21	5	0	0	0	0.56641	1	2349	2349		47.228	7.3545	1	3128400			12817	4011	8823	8831	14689	14689	55				0.09424585019473852
GRKLLPLV	8	Unmodified	_GRKLLPLV_					0	0	0			REV__ENSG00000039123|ENST00000230640|MTREX	REV__ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.30816650390625	2	448.308013	894.601472	0.040774	1.8279E-05	0.012791	5.7345E-06	0.053566	2.4014E-05	448.3078723892815	79.698	1.7809	80.247	79.234	81.015	0.54945					88	41	3	0	0	0	0.79929	1	9174	9174		18.324	0.95945	1	769040	+		12818	16309	8824	8832	14690	14690					0.1499554879040943
GRKMQRMV	8	Unmodified	_GRKMQRMV_					0	0	0			REV__ENSG00000152104|ENST00000366956|PTPN14	REV__ENSG00000152104|ENST00000366956|PTPN14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.8055419921875	2	503.275864	1004.53717	0.96854	0.00048744	2.8689	0.0014438	3.8374	0.0019313	503.27638524238	31.876	0.72774	31.984	31.59	32.317	0.10707					25	16	2	0	0	0	0.4196	1	2233	2233		18.324	0	1	157670	+		12819	20285	8825	8833	14691	14691					0.035087023703226805
GRKPQAILE	9	Unmodified	_GRKPQAILE_					0	0	0		ENST00000513842.1_1_4:7765494-7800689:-|nuORF;nc|ENSG00000196526|Q8N556|AFAP1;ENSG00000196526|ENST00000420658|AFAP1;ENST00000505447.5_1_4:7765494-7780765:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.30078125	2	506.300916	1010.58728	0.17096	8.6557E-05	-0.12578	-6.3681E-05	0.045182	2.2876E-05	506.30077801441314	96.371	1.2912	96.419	95.878	97.169	0.047798					71	29	3	0	0	0	0.7932	1	10232	10232		25.574	0.12388	1	516710			12820	8068	8826	8834	14692	14692					0.0824085157147465
GRKRTKFR	8	Unmodified	_GRKRTKFR_					0	0	0			REV__ENST00000460660.1_1_2:201677931-201678069:+|nuORF	REV__ENST00000460660.1_1_2:201677931-201678069:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8263549804688	2	524.827966	1047.64138	1.2413	0.00065145	-3.3929	-0.0017807	-2.1517	-0.0011293	524.8261082044575	99.092	3.5228	99.14	98.41	101.93	0.047852					344	82	7	0	0	0	0.8347	1	10958	10958		23.042	0.0057756	1	29910000	+		12821	27009	8827	8835	14693	14693					0.11946488513672193
GRLAASATH	9	Unmodified	_GRLAASATH_					0	0	0			REV__ENST00000528220.1_1_11:65488056-65488251:-|nuORF	REV__ENST00000528220.1_1_11:65488056-65488251:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2408752441406	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.76764	1	8143	8143		34.173	2.2177	1	1068200	+		12822	24863	8828	8836	14694	14694					0.021228632976999506
GRLALGLIV	9	Unmodified	_GRLALGLIV_					0	0	0			REV__nc|ENSG00000153303|Q8N878-2|FRMD1	REV__nc|ENSG00000153303|Q8N878-2|FRMD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.29803466796875	2	456.30547	910.596387	0.63968	0.00029189	-3.9902	-0.0018208	-3.3505	-0.0015289	456.3036136363667	22.002	0.68279	21.944	21.689	22.372	-0.057201					33	27	2	0	0	0	0.7932	1	649	649		20.482	1.1219	1	18245	+		12823	20345	8829	8837	14695	14695					0.1375124492778923
GRLAPQQN	8	Unmodified	_GRLAPQQN_					0	0	0		ENST00000485392.5_1_6:32120937-32122037:-|nuORF;ENST00000428778.5_1_6:32119931-32122037:-|nuORF	ENST00000485392.5_1_6:32120937-32122037:-|nuORF	ENST00000485392.5_1_6:32120937-32122037:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.240966796875	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.91977	1	7648	7648		45.952	8.7928	1	716910			12824	11597	8830	8838	14696	14696					0.021228632976999506
GRLAPQQN	8	Unmodified	_GRLAPQQN_					0	0	0		ENST00000485392.5_1_6:32120937-32122037:-|nuORF;ENST00000428778.5_1_6:32119931-32122037:-|nuORF	ENST00000485392.5_1_6:32120937-32122037:-|nuORF	ENST00000485392.5_1_6:32120937-32122037:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2406311035156	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.91472	1	7701	7701		44.117	4.864	1	1094000			12825	11597	8830	8838	14697	14697					0.021228632976999506
GRLFCRRTR	9	Unmodified	_GRLFCRRTR_					0	0	0		ENST00000478253.5_1_3:58223324-58223504:+|nuORF	ENST00000478253.5_1_3:58223324-58223504:+|nuORF	ENST00000478253.5_1_3:58223324-58223504:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.8330078125	2	582.830183	1163.64581	0.71631	0.00041749	3.6018	0.0020993	4.3181	0.0025167	582.8322944715994	93.943	3.3707	94.171	93.279	96.65	0.22863					214	80	3	0	0	0	0.7932	1	9612	9612		25.574	1.0549	1	862210			12826	12381	8831	8839	14698	14698					0.07053629664937944
GRLFRTGHS	9	Unmodified	_GRLFRTGHS_					0	0	0			REV__nc|ENSG00000184470|Q9NNW7-4|TXNRD2	REV__nc|ENSG00000184470|Q9NNW7-4|TXNRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.7799072265625	2	515.780682	1029.54681	0.044715	2.3063E-05	-2.3319	-0.0012027	-2.2872	-0.0011797	515.7798871030025	31.661	0.53569	31.61	31.289	31.825	-0.051033					16	11	2	0	0	0	0.78536	1	1813	1813		29.15	0.89528	1	36527	+		12827	22682	8832	8840	14699	14699					0.03321929971684767
GRLFTQAMSS	10	Unmodified	_GRLFTQAMSS_					0	0	0		ENST00000514430.5_1_4:103552854-103553112:-|nuORF	ENST00000514430.5_1_4:103552854-103553112:-|nuORF	ENST00000514430.5_1_4:103552854-103553112:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.2716674804688	2	549.274041	1096.53353	-0.21746	-0.00011945	-4.0786	-0.0022403	-4.2961	-0.0023597	549.2716639950368	43.633	0.67875	43.63	43.369	44.047	-0.002449					34	16	3	0	0	0	0.57924	1	3380	3380		51.193	1.7511	1	280700			12828	13066	8833	8841	14700	14700					-0.01087688922552843
GRLGDRGLP	9	Unmodified	_GRLGDRGLP_					0	0	0		ENST00000397358.7_1_8:28747965-28748196:+|nuORF;ENST00000287701.14_1_8:28747965-28821364:+|nuORF	ENST00000397358.7_1_8:28747965-28748196:+|nuORF	ENST00000397358.7_1_8:28747965-28748196:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7687683105469	2	470.769783	939.525013	-0.0079822	-3.7578E-06	-1.8362	-0.00086443	-1.8442	-0.00086819	470.7688392361173	51.36	0.75376	51.795	51.534	52.288	0.43505					46	17	4	0	0	0	0.51307	1	5083	5083		51.335	0.14276	1	3116800			12829	9661	8834	8842	14701	14701					0.052831252231385406
GRLGEIEITRA	11	Unmodified	_GRLGEIEITRA_					0	0	0			REV__ENSG00000148798|ENST00000369849|INA	REV__ENSG00000148798|ENST00000369849|INA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.5650329589844	3	405.566571	1213.67788	-1.0529	-0.00042701	-3.3591	-0.0013624	-4.412	-0.0017894	405.5651485487608	63.261	1.4207	63.284	62.805	64.225	0.022984					129	62	3	0	0	0	0.73277	1	5527	5527		25.892	1.6599	1	264990	+		12830	20137	8835	8843	14702	14702					0.0795927582908007
GRLGQQKP	8	Unmodified	_GRLGQQKP_					0	0	0			REV__nc|ENSG00000147133|P21675-25|TAF1	REV__nc|ENSG00000147133|P21675-25|TAF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2401123046875	2	442.259051	882.503549	1.4151	0.00062583	-1.2002	-0.00053081	0.21485	9.5019E-05	442.2584158088267	83.61	1.44	83.669	83.235	84.675	0.05925					59	32	3	0	0	0	0.4196	1	8389	8389		25.45	0	1	82803	+		12831	20054	8836	8844	14703	14703					0.057597401944121884
GRLGRDGPL	9	Unmodified	_GRLGRDGPL_					0	0	0			REV__ENSG00000081052|ENST00000396625|COL4A4	REV__ENSG00000081052|ENST00000396625|COL4A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7689514160156	2	470.769783	939.525013	0.34379	0.00016185	-2.4863	-0.0011705	-2.1425	-0.0010086	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.62081	1	4297	4297		45.952	1.5748	1	1863100	+		12832	16816	8837	8845	14704	14704					0.052831252231385406
GRLGRDGPL	9	Unmodified	_GRLGRDGPL_					0	0	0			REV__ENSG00000081052|ENST00000396625|COL4A4	REV__ENSG00000081052|ENST00000396625|COL4A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76910400390625	2	470.769783	939.525013	0.25998	0.00012239	-1.8077	-0.000851	-1.5477	-0.00072861	470.7687399956873	50.307	1.239	50.754	50.307	51.546	0.4476					93	29	5	0	0	0	0.55097	1	4926	4926		49.442	1.7842	1	9098100	+		12833	16816	8837	8845	14705	14705					0.052831252231385406
GRLGRDGPL	9	Unmodified	_GRLGRDGPL_					0	0	0			REV__ENSG00000081052|ENST00000396625|COL4A4	REV__ENSG00000081052|ENST00000396625|COL4A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.76904296875	2	470.769783	939.525013	0.24256	0.00011419	-1.7466	-0.00082224	-1.504	-0.00070805	470.7687464868604	50.117	1.1073	50.962	50.641	51.748	0.84501					94	26	5	0	0	0	0.67345	1	5000	5000		42.396	8.2236	1	10800000	+		12834	16816	8837	8845	14706	14706					0.052831252231385406
GRLGRPVS	8	Unmodified	_GRLGRPVS_					0	0	0			REV__ENST00000459625.5_1_12:48184825-48185932:-|nuORF	REV__ENST00000459625.5_1_12:48184825-48185932:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.25390625	2	421.253769	840.492984	-0.18708	-7.8807E-05	0.65223	0.00027475	0.46515	0.00019595	421.25387987106194	84.393	1.9611	84.46	83.811	85.772	0.067177					92	44	3	0	0	0	0.82658	1	8405	8405		21.96	2.5999	1	712040	+		12835	26987	8838	8846	14707	14707					0.06635757539982023
GRLGSSSLKL	10	Unmodified	_GRLGSSSLKL_					0	0	0			REV__ENSG00000148082|ENST00000375835|SHC3	REV__ENSG00000148082|ENST00000375835|SHC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.3055419921875	2	509.306198	1016.59784	0.38214	0.00019463	-1.238	-0.0006305	-0.85582	-0.00043587	509.30545060509706	93	1.7659	93.046	92.369	94.135	0.045448					129	41	4	0	0	0	0.86338	1	9733	9733		31.634	2.4847	1	3009900	+		12836	20094	8839	8847	14708	14708					0.09020834225896124
GRLHKTSA	8	Unmodified	_GRLHKTSA_					0	0	0			REV__ENSG00000180432|ENST00000316161|CYP8B1	REV__ENSG00000180432|ENST00000316161|CYP8B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25140380859375	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.89043	1	8018	8018		35.618	3.6634	1	3292300	+		12837	22397	8840	8848	14709	14709					0.04839453677379879
GRLHKTSA	8	Unmodified	_GRLHKTSA_					0	0	0			REV__ENSG00000180432|ENST00000316161|CYP8B1	REV__ENSG00000180432|ENST00000316161|CYP8B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2513732910156	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.89043	1	7989	7989		35.618	2.1027	1	3370400	+		12838	22397	8840	8848	14710	14710					0.04839453677379879
GRLIERRHAM	10	Unmodified	_GRLIERRHAM_					0	0	0			REV__ENSG00000233802|ENST00000623787|TRIM49D2	REV__ENSG00000233802|ENST00000623787|TRIM49D2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8697509765625	2	619.848573	1237.68259	1.266	0.00078475	2.6768	0.0016592	3.9428	0.002444	619.8494294203714	96.27	0.12892	96.501	96.437	96.566	0.23103					4	2	2	0	0	0	0.37624	1	9904	9904		45.972	0	1	72071	+		12839	22496	8841	8849	14711	14711					0.07325881490851316
GRLKPGQN	8	Unmodified	_GRLKPGQN_					0	0	0			REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1	REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25146484375	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.84341	3	7453	7302;7376;7453		31.955	2.6214	1	1788100	+		12840	20624	8842	8850	14712;14713;14714	14714					0.04839453677379879
GRLKPGQN	8	Unmodified	_GRLKPGQN_					0	0	0			REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1	REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25164794921875	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.90465	1	7774	7774		40.573	8.6178	1	3370400	+		12841	20624	8842	8850	14715	14715					0.04839453677379879
GRLKPGQN	8	Unmodified	_GRLKPGQN_					0	0	0			REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1	REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2516174316406	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.87922	1	7364	7364		31.955	1.4512	1	712390	+		12842	20624	8842	8850	14716	14716					0.04839453677379879
GRLKPGQN	8	Unmodified	_GRLKPGQN_					0	0	0			REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1	REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25152587890625	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.8347	2	7649	7649;7688		30.504	1.3541	1	2743300	+		12843	20624	8842	8850	14717;14718	14717					0.04839453677379879
GRLKPGQN	8	Unmodified	_GRLKPGQN_					0	0	0			REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1	REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2513732910156	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87479	3	7596	7442;7596;7605		31.955	2.6214	1	2494100	+		12844	20624	8842	8850	14719;14720;14721	14720					0.04839453677379879
GRLKSPTMLQ	10	Oxidation (M)	_GRLKSPTM(Oxidation (M))LQ_		GRLKSPTM(1)LQ		GRLKSPTM(46)LQ	0	0	1			REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8182983398438	2	573.818615	1145.62268	-0.77927	-0.00044716	-2.3628	-0.0013558	-3.1421	-0.001803	573.8171128348157	36.202	1.1773	36.211	35.659	36.837	0.0092773					66	25	4	0	0	0	0.66675	1	2302	2302		46.457	7.2039	1	690830	+		12845	20776	8843	8851	14722	14722		309			0.05569146036964412
GRLKSTKATT	10	Unmodified	_GRLKSTKATT_					0	0	0			REV__ENSG00000204843|ENST00000628224|DCTN1	REV__ENSG00000204843|ENST00000628224|DCTN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8167114257812	2	531.81693	1061.61931	0.70533	0.00037511	-0.90544	-0.00048153	-0.20011	-0.00010642	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.86348	1	8625	8625		31.53	2.3803	1	1163300	+		12846	23522	8844	8852	14723	14723					0.0909621925461579
GRLKSTKATT	10	Unmodified	_GRLKSTKATT_					0	0	0			REV__ENSG00000204843|ENST00000628224|DCTN1	REV__ENSG00000204843|ENST00000628224|DCTN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8167114257812	2	531.81693	1061.61931	1.0704	0.00056928	-1.0589	-0.00056316	0.011518	6.1253E-06	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.8651	1	10490	10490		25.574	1.3713	1	4490200	+		12847	23522	8844	8852	14724	14724					0.0909621925461579
GRLLFSPPA	9	Unmodified	_GRLLFSPPA_					0	0	0			REV__ENST00000472641.1_1_6:32116492-32119637:-|nuORF	REV__ENST00000472641.1_1_6:32116492-32119637:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774353027344	2	479.279452	956.544351	-1.4767	-0.00070776	-2.9072	-0.0013934	-4.3839	-0.0021011	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.76255	1	7854	7854		35.618	2.1027	1	1785900	+		12848	24112	8845	8853	14725	14725					0.06434081514032641
GRLLFSPPA	9	Unmodified	_GRLLFSPPA_					0	0	0			REV__ENST00000472641.1_1_6:32116492-32119637:-|nuORF	REV__ENST00000472641.1_1_6:32116492-32119637:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2775573730469	2	479.279452	956.544351	-1.5678	-0.00075141	-2.7191	-0.0013032	-4.2869	-0.0020546	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.77244	1	8374	8374		32.812	0.85756	1	6441000	+		12849	24112	8845	8853	14726	14726					0.06434081514032641
GRLLGGNLN	9	Unmodified	_GRLLGGNLN_					0	0	0			REV__CON__Q0VCM5;REV__nc|ENSG00000055957|P19827-3|ITIH1	REV__CON__Q0VCM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26416015625	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.76764	1	8282	8282		34.173	0	1	4885100	+	+	12850	15996;16415	8846	8854	14727	14727					0.05435722848858404
GRLLGGNLN	9	Unmodified	_GRLLGGNLN_					0	0	0			REV__CON__Q0VCM5;REV__nc|ENSG00000055957|P19827-3|ITIH1	REV__CON__Q0VCM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2622375488281	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.76764	1	7450	7450		34.173	3.6689	1	1329900	+	+	12851	15996;16415	8846	8854	14728	14728					0.05435722848858404
GRLLGGNLN	9	Unmodified	_GRLLGGNLN_					0	0	0			REV__CON__Q0VCM5;REV__nc|ENSG00000055957|P19827-3|ITIH1	REV__CON__Q0VCM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.263916015625	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.76764	1	7792	7792		34.173	2.2177	1	4732500	+	+	12852	15996;16415	8846	8854	14729	14729					0.05435722848858404
GRLLGGNLN	9	Unmodified	_GRLLGGNLN_					0	0	0			REV__CON__Q0VCM5;REV__nc|ENSG00000055957|P19827-3|ITIH1	REV__CON__Q0VCM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2640380859375	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.77244	1	7877	7877		32.812	2.3088	1	4061400	+	+	12853	15996;16415	8846	8854	14730	14730					0.05435722848858404
GRLLGGNLN	9	Unmodified	_GRLLGGNLN_					0	0	0			REV__CON__Q0VCM5;REV__nc|ENSG00000055957|P19827-3|ITIH1	REV__CON__Q0VCM5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2637634277344	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.77244	1	9409	9409		32.812	1.2826	1	3505500	+	+	12854	15996;16415	8846	8854	14731	14731					0.05435722848858404
GRLLKILFVIF	11	Unmodified	_GRLLKILFVIF_					0	0	0		ENSG00000227877|ENST00000414264|MRLN	ENSG00000227877|ENST00000414264|MRLN	ENSG00000227877|ENST00000414264|MRLN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.29193115234375	3	440.291831	1317.85366	-1.6143	-0.00071074	3.3925	0.0014937	1.7783	0.00078296	440.2929975930263	58.275	1.2356	58.275	57.838	59.074	0					156	53	4	0	0	0	0.80813	1	5061	5061		9.6461	1.6118	1	193800			12855	8720	8847	8855	14732	14732					0.20745142081113954
GRLLKILFVIF	11	Unmodified	_GRLLKILFVIF_					0	0	0		ENSG00000227877|ENST00000414264|MRLN	ENSG00000227877|ENST00000414264|MRLN	ENSG00000227877|ENST00000414264|MRLN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.29205322265625	3	440.291831	1317.85366	-0.14762	-6.4996E-05	1.4032	0.0006178	1.2555	0.0005528	440.29224154688933	58.12	1.3783	58.106	57.522	58.9	-0.013641					131	47	4	0	0	0	0.78683	1	5293	5293		14.086	1.1285	1	235220			12856	8720	8847	8855	14733	14733					0.20745142081113954
GRLLKILFVIF	11	Unmodified	_GRLLKILFVIF_					0	0	0		ENSG00000227877|ENST00000414264|MRLN	ENSG00000227877|ENST00000414264|MRLN	ENSG00000227877|ENST00000414264|MRLN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.29388427734375	3	440.291831	1317.85366	-1.4987	-0.00065986	2.7845	0.001226	1.2858	0.00056611	440.29287290347224	59.592	1.1212	59.686	59.191	60.312	0.094063					94	32	4	0	0	0	0.76251	2	5092	5092;5123		19.263	6.3052	1	285330			12857	8720	8847	8855	14734;14735	14734					0.20745142081113954
GRLLLFSFRV	10	Unmodified	_GRLLLFSFRV_					0	0	0			REV__nc|ENSG00000179085|Q9P2X0-2|DPM3	REV__nc|ENSG00000179085|Q9P2X0-2|DPM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.36669921875	2	604.369133	1206.72371	-1.2751	-0.00077064	-2.39	-0.0014444	-3.6651	-0.0022151	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85466	1	12767	12767		20.947	0	1	3346600	+		12858	30063	8848	8856	14736	14736					0.12861965801971564
GRLLSRDKS	9	Unmodified	_GRLLSRDKS_					0	0	0			REV__ENST00000490863.5_1_1:54653465-54661292:-|nuORF	REV__ENST00000490863.5_1_1:54653465-54661292:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3011474609375	2	516.301447	1030.58834	-0.029363	-1.516E-05	-1.5847	-0.0008182	-1.6141	-0.00083336	516.3013663532613	57.234	1.5278	57.221	56.762	58.289	-0.012203					115	51	4	0	0	0	0.76764	1	5162	5162		34.173	2.6427	1	678400	+		12859	23693	8849	8857	14737	14737					0.07427065940350985
GRLLTALVLPD	11	Unmodified	_GRLLTALVLPD_					0	0	0		ENSG00000145214|ENST00000273814|DGKQ	ENSG00000145214|ENST00000273814|DGKQ	ENSG00000145214|ENST00000273814|DGKQ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	584.356689453125	2	584.358431	1166.70231	-1.3402	-0.00078317	-2.8317	-0.0016547	-4.1719	-0.0024379	584.3568464329793	92.429	3.0691	92.615	91.162	94.231	0.18582					184	72	3	0	0	0	0.7434	1	9318	9318		23.523	1.8369	1	728420			12860	4752	8850	8858	14738	14738					0.12562535982578993
GRLNEIYC	8	Unmodified	_GRLNEIYC_					0	0	0			REV__nc|ENSG00000019144|Q86UU1-3|PHLDB1	REV__nc|ENSG00000019144|Q86UU1-3|PHLDB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2359924316406	2	484.236927	966.459301	0.22337	0.00010816	-2.9462	-0.0014267	-2.7229	-0.0013185	484.2359214945001	86.186	1.2292	86.629	86.074	87.303	0.44331					103	29	6	0	0	0	0.88944	2	10048	10048;10081		57.811	6.0627	1	37343000	+		12861	16227	8851	8859	14739;14740	14739					-0.025270320140862168
GRLNEIYC	8	Unmodified	_GRLNEIYC_					0	0	0			REV__nc|ENSG00000019144|Q86UU1-3|PHLDB1	REV__nc|ENSG00000019144|Q86UU1-3|PHLDB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2361145019531	2	484.236927	966.459301	-0.53754	-0.00026029	-2.2523	-0.0010907	-2.7899	-0.001351	484.2362894528465	84.849	1.2824	85.296	84.912	86.194	0.44736					130	31	5	0	0	0	0.92457	1	9904	9904		47.916	5.4411	1	48085000	+		12862	16227	8851	8859	14741	14741					-0.025270320140862168
GRLNHLHL	8	Unmodified	_GRLNHLHL_					0	0	0			REV__ENSG00000179532|ENST00000254579|DNHD1	REV__ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.28216552734375	2	480.280318	958.546083	1.0992	0.00052791	0.18402	8.8382E-05	1.2832	0.00061629	480.2802815297023	99.288	1.3371	99.651	99.251	100.59	0.36292					88	33	4	0	0	0	0.94132	1	12087	12087		54.765	2.4655	1	8963900	+		12863	22341	8852	8860	14742	14742					0.06515135322649712
GRLNIQSGL	9	Unmodified	_GRLNIQSGL_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2772521972656	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.71772	1	8554	8554		39.253	2.0937	1	7289200			12864	1598	8853	8861	14743	14743					0.06031992020314192
GRLNLGLTN	9	Unmodified	_GRLNLGLTN_					0	0	0		chr21:37008223-37013551|55|121.87|0.54|7.81|+|1|RIPPLY3,RIPPLY3|2	chr21:37008223-37013551|55|121.87|0.54|7.81|+|1|RIPPLY3,RIPPLY3|2	chr21:37008223-37013551|55|121.87|0.54|7.81|+|1|RIPPLY3,RIPPLY3|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2774658203125	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.75725	3	8626	8578;8626;8698		36.447	2.4771	1	7289200			12865	376	8854	8862	14744;14745;14746	14745					0.06031992020302823
GRLNLGLTN	9	Unmodified	_GRLNLGLTN_					0	0	0		chr21:37008223-37013551|55|121.87|0.54|7.81|+|1|RIPPLY3,RIPPLY3|2	chr21:37008223-37013551|55|121.87|0.54|7.81|+|1|RIPPLY3,RIPPLY3|2	chr21:37008223-37013551|55|121.87|0.54|7.81|+|1|RIPPLY3,RIPPLY3|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2776794433594	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.76419	1	7837	7837		35.152	2.4015	1	1802300			12866	376	8854	8862	14747	14747					0.06031992020302823
GRLNLGLTN	9	Unmodified	_GRLNLGLTN_					0	0	0		chr21:37008223-37013551|55|121.87|0.54|7.81|+|1|RIPPLY3,RIPPLY3|2	chr21:37008223-37013551|55|121.87|0.54|7.81|+|1|RIPPLY3,RIPPLY3|2	chr21:37008223-37013551|55|121.87|0.54|7.81|+|1|RIPPLY3,RIPPLY3|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27813720703125	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.78528	1	9821	9821		29.17	1.2878	1	6350300			12867	376	8854	8862	14748	14748					0.06031992020302823
GRLPAAPAAG	10	Unmodified	_GRLPAAPAAG_					0	0	0			REV__nc|ENSG00000291307|A0A3B3IS91|POLGARF	REV__nc|ENSG00000291307|A0A3B3IS91|POLGARF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.7546081542969	2	440.753601	879.49265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.11	1	115.12	114.62	115.62	0.0094528								0	0	0	0.45132	1	13878	13878		23.042	3.6825	1		+		12868	30304	8855	8863	14749	14749					0.04808337820122688
GRLPCKRPVR	10	Carbamidomethyl (C)	_GRLPC(Carbamidomethyl (C))KRPVR_	GRLPC(1)KRPVR		GRLPC(41)KRPVR		0	1	0			REV__ENST00000416263.3_1_17:48944138-48944246:+|nuORF	REV__ENST00000416263.3_1_17:48944138-48944246:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8687744140625	2	619.866766	1237.71898	1.2649	0.00078404	2.8711	0.0017797	4.1359	0.0025637	619.86841143733	93.879	2.9041	94.108	92.241	95.145	0.22863					217	69	4	0	0	0	0.77314	1	9494	9494		40.778	6.8565	1	2572300	+		12869	26433	8856	8864	14750	14750	323				0.10962758387563554
GRLPCKRPVR	10	Carbamidomethyl (C)	_GRLPC(Carbamidomethyl (C))KRPVR_	GRLPC(1)KRPVR		GRLPC(44)KRPVR		0	1	0			REV__ENST00000416263.3_1_17:48944138-48944246:+|nuORF	REV__ENST00000416263.3_1_17:48944138-48944246:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8694458007812	2	619.866766	1237.71898	1.2588	0.00078029	3.408	0.0021125	4.6668	0.0028928	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.71042	1	11434	11434		44.117	10.195	1	4742500	+		12870	26433	8856	8864	14751	14751	323				0.10962758387563554
GRLPETPQSP	10	Unmodified	_GRLPETPQSP_					0	0	0			REV__ENST00000298125.6_1_13:52336362-52336515:+|nuORF	REV__ENST00000298125.6_1_13:52336362-52336515:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	541.787109375	2	541.285463	1080.55637	-1.7029	-0.00092177	1.6465	0.00089123	-0.056423	-3.0541E-05	541.2862100780545	20.29	0.5934	20.29	20.067	20.66	0					57	27	3	0	0	0	0.69342	1	490	490		45.022	11.101	1	123340	+		12871	24728	8857	8865	14752	14752					0.019316534665676954
GRLPGGVVAGG	11	Unmodified	_GRLPGGVVAGG_					0	0	0			REV__ENST00000368309.3_1_1:156020308-156021008:-|nuORF	REV__ENST00000368309.3_1_1:156020308-156021008:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.27197265625	2	470.272158	938.529764	-0.95275	-0.00044805	0.77303	0.00036353	-0.17972	-8.4519E-05	470.2725133090264	92.093	2.8487	92.314	91.222	94.07	0.22157					155	67	4	0	0	0	0.6921	1	9307	9307		32.812	4.9302	1	1872200	+		12872	25589	8858	8866	14753	14753					0.05804009365908769
GRLPGPWL	8	Unmodified	_GRLPGPWL_					0	0	0		ENST00000265465.7_1_11:65029470-65029812:+|nuORF	ENST00000265465.7_1_11:65029470-65029812:+|nuORF	ENST00000265465.7_1_11:65029470-65029812:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.2603759765625	2	448.261062	894.507572	-1.3629	-0.00061094	-3.04	-0.0013627	-4.4029	-0.0019737	448.2596556507269	89.763	2.6764	90.233	89.394	92.071	0.47068					116	66	2	0	0	0	0.88915	1	10643	10643		35.201	6.9464	1	2268200			12873	9507	8859	8867	14754	14754					0.05609829688125956
GRLPGSSLH	9	Unmodified	_GRLPGSSLH_					0	0	0			REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.2554626464844	2	462.256508	922.498464	-0.66018	-0.00030517	-1.031	-0.00047661	-1.6912	-0.00078178	462.25599733554526	52.52	1.5182	52.944	52.318	53.836	0.42348					74	36	3	0	0	0	0.22631	1	5273	5273		71.296	19.96	1	3176800	+		12874	24354	8860	8868	14755	14755					0.03411436331805362
GRLPGSSLH	9	Unmodified	_GRLPGSSLH_					0	0	0			REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	462.256508	922.498464	-1.6486	-0.00076206	-0.14988	-6.9285E-05	-1.7984	-0.00083134	462.256296784291	52.926	1.2643	52.926	52.609	53.873	0	-0.075419	0.0010335	NaN	71.296	57	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	402630	+		12875	24354	8860	8868							0.03411436331805362
GRLPGSSLH	9	Unmodified	_GRLPGSSLH_					0	0	0			REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	462.256508	922.498464	-0.052029	-2.4051E-05	-1.8446	-0.00085266	-1.8966	-0.00087671	462.2555005162555	53.141	1.5359	53.138	52.782	54.317	-0.0033035	0.13618	-0.0005332	NaN	71.296	63	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	343700	+		12876	24354	8860	8868							0.03411436331805362
GRLPGSSLH	9	Unmodified	_GRLPGSSLH_					0	0	0			REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	462.256508	922.498464	-0.65201	-0.00030139	-1.3806	-0.00063819	-2.0326	-0.00093958	462.2556727030587	53.147	1.6017	53.123	52.702	54.303	-0.024132	0.12123	-0.00010427	NaN	71.296	57	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	262280	+		12877	24354	8860	8868							0.03411436331805362
GRLPGSSLH	9	Unmodified	_GRLPGSSLH_					0	0	0			REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	462.256508	922.498464	-0.40119	-0.00018545	-1.4714	-0.00068017	-1.8726	-0.00086563	462.25566499874066	53.207	0.84459	53.225	52.932	53.776	0.017487	0.22298	-0.00018824	NaN	71.296	43	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	256360	+		12878	24354	8860	8868							0.03411436331805362
GRLPGSSLH	9	Unmodified	_GRLPGSSLH_					0	0	0			REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	462.256508	922.498464	-1.1445	-0.00052905	-0.84512	-0.00039066	-1.9896	-0.00091971	462.25602258750365	52.877	1.5957	52.917	52.538	54.134	0.040596	-0.084256	0.00039078	NaN	71.296	75	53	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	355400	+		12879	24354	8860	8868							0.03411436331805362
GRLPGSSLH	9	Unmodified	_GRLPGSSLH_					0	0	0			REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	462.256508	922.498464	0.33515	0.00015493	-2.2986	-0.0010625	-1.9635	-0.00090762	462.25537840031205	52.869	1.7729	52.94	52.386	54.159	0.070709	-0.061407	-0.00095298	NaN	71.296	71	49	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	378440	+		12880	24354	8860	8868							0.03411436331805362
GRLPGSSLH	9	Unmodified	_GRLPGSSLH_					0	0	0			REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	REV__ENST00000258341.4_1_1:183086469-183086538:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	462.256508	922.498464	-0.49862	-0.00023049	-1.3952	-0.00064492	-1.8938	-0.00087541	462.25578021267444	52.959	1.6493	52.885	52.507	54.157	-0.074509	-0.11705	-0.00011772	NaN	71.296	75	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	397620	+		12881	24354	8860	8868							0.03411436331805362
GRLPLESRKIN	11	Unmodified	_GRLPLESRKIN_					0	0	0			REV__ENST00000475722.5_1_1:150981012-150999718:+|nuORF	REV__ENST00000475722.5_1_1:150981012-150999718:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8819580078125	2	641.883136	1281.75172	1.6835	0.0010806	-2.7242	-0.0017486	-1.0407	-0.00066802	641.8812254430574	95.773	2.4493	95.82	94.333	96.782	0.046989					202	57	5	0	0	0	0.67778	1	10094	10094		35.152	5.982	1	1550900	+		12882	19795	8861	8869	14756	14756					0.12211243991418996
GRLPVFKN	8	Unmodified	_GRLPVFKN_					0	0	0			REV__nc|ENSG00000173947|Q8TCI5-2|CIMAP3	REV__nc|ENSG00000173947|Q8TCI5-2|CIMAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.77734375	2	465.779619	929.544686	-0.087401	-4.0709E-05	-4.3327	-0.0020181	-4.4201	-0.0020588	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.90465	1	8109	8109		40.573	3.5441	1	1330000	+		12883	21966	8862	8870	14757	14757					0.07709501233898663
GRLPVGRGK	9	Unmodified	_GRLPVGRGK_					0	0	0			REV__ENST00000341865.8_1_6:42073427-42073679:-|nuORF	REV__ENST00000341865.8_1_6:42073427-42073679:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.769287109375	2	470.295968	938.577383	-0.32186	-0.00015137	2.557	0.0012025	2.2351	0.0010512	470.2970688164189	80.337	0.42183	80.756	80.551	80.972	0.41826					12	9	2	0	0	0	0.19701	1	9213	9213		66.429	13.078	1	101320	+		12884	25264	8863	8871	14758	14758					0.10563708356755797
GRLPYKAGL	9	Unmodified	_GRLPYKAGL_					0	0	0		nc|ENSG00000186635|Q96P48-5|ARAP1;nc|ENSG00000186635|Q96P48-7|ARAP1;nc|ENSG00000186635|Q96P48-2|ARAP1;nc|ENSG00000186635|Q96P48-4|ARAP1;nc|ENSG00000186635|Q96P48-1|ARAP1;nc|ENSG00000186635|Q96P48-3|ARAP1;ENSG00000186635|ENST00000393609|ARAP1;ENST00000465814.5_1_11:72407932-72423670:-|nuORF	nc|ENSG00000186635|Q96P48-5|ARAP1	nc|ENSG00000186635|Q96P48-5|ARAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7906188964844	2	487.792727	973.5709	-1.0481	-0.00051127	-3.1066	-0.0015154	-4.1547	-0.0020267	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.74721	1	7978	7978		37.159	1.5408	1	1176800			12885	7808	8864	8872	14759	14759					0.08305770405377189
GRLQLCPLTF	10	Unmodified	_GRLQLCPLTF_					0	0	0			REV__ENST00000373055.5_1_1:38174330-38174495:+|nuORF	REV__ENST00000373055.5_1_1:38174330-38174495:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.320068359375	2	574.318251	1146.62195	0.59156	0.00033974	1.5937	0.00091529	2.1853	0.001255	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.80179	1	9583	9583		39.253	4.0521	1	1777600	+		12886	25745	8865	8873	14760	14760					0.05450351387889896
GRLQLSRLQPA	11	Unmodified	_GRLQLSRLQPA_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8700561523438	2	619.870028	1237.7255	1.2588	0.00078029	-1.8553	-0.0011501	-0.59653	-0.00036977	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.73893	1	11661	11661		24.519	2.8334	1	4742500			12887	4956	8866	8874	14761	14761					0.11614974819940471
GRLQQVLTG	9	Unmodified	_GRLQQVLTG_					0	0	0		ENST00000571796.5_1_17:80869637-80887508:+|nuORF;ENSG00000141556|ENST00000355528|TBCD;nc|ENSG00000141556|Q9BTW9-4|TBCD	ENST00000571796.5_1_17:80869637-80887508:+|nuORF	ENST00000571796.5_1_17:80869637-80887508:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.26690673828125	2	486.285266	970.555979	-0.72473	-0.00035242	-0.48068	-0.00023375	-1.2054	-0.00058617	486.2846388106944	87.958	1.1184	88.159	87.542	88.661	0.20115					42	26	2	0	0	0	0.20789	1	8648	8648		26.693	0	1	78686			12888	4510	8867	8875	14762	14762					0.06952278537369239
GRLRGTLSA	9	Unmodified	_GRLRGTLSA_					0	0	0		ENSG00000241127|ENST00000223273|YAE1	ENSG00000241127|ENST00000223273|YAE1	ENSG00000241127|ENST00000223273|YAE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7777404785156	2	465.777608	929.540663	0.60386	0.00028126	-0.75167	-0.00035011	-0.14781	-6.8848E-05	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.7932	1	7981	7981		26.693	1.2427	1	1082300			12889	8789	8868	8876	14763	14763					0.07307411740180214
GRLRRRRRVRP	11	Unmodified	_GRLRRRRRVRP_					0	0	0			REV__ENST00000436427.1_3_1:43148660-43161876:+|nuORF	REV__ENST00000436427.1_3_1:43148660-43161876:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.8253173828125	3	493.322292	1476.94505	-0.74413	-0.0003671	3.717	0.0018337	2.9729	0.0014666	493.32385448988566	15.851	0.19926	15.899	15.788	15.987	0.047803					18	7	3	0	0	0	0.1838	1	85	85		6.001	1.9181	1	123360	+		12890	26691	8869	8877	14764	14764					0.22565263341653008
GRLSCPEAPAP	11	Unmodified	_GRLSCPEAPAP_					0	0	0			REV__nc|ENSG00000179583|P33076-2|CIITA	REV__nc|ENSG00000179583|P33076-2|CIITA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.2706909179688	2	549.274041	1096.53353	-0.3783	-0.00020779	-3.9578	-0.0021739	-4.3361	-0.0023817	549.2717548800646	43.638	0.55167	43.602	43.362	43.914	-0.035816					29	12	3	0	0	0	0.58425	1	3451	3451		45.972	1.8554	1	283590	+		12891	22342	8870	8878	14765	14765					-0.010876889225755804
GRLSGRPV	8	Unmodified	_GRLSGRPV_					0	0	0			REV__nc|ENSG00000089639|Q9P107-2|GMIP	REV__nc|ENSG00000089639|Q9P107-2|GMIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.2539978027344	2	421.253769	840.492984	2.7224	0.0011468	-2.0799	-0.00087617	0.6425	0.00027065	421.25268060933485	84.188	1.829	84.247	83.761	85.59	0.059258					100	41	4	0	0	0	0.86677	1	8504	8504		27.882	2.4321	1	871350	+		12892	16972	8871	8879	14766	14766					0.06635757539982023
GRLSGRPV	8	Unmodified	_GRLSGRPV_					0	0	0			REV__nc|ENSG00000089639|Q9P107-2|GMIP	REV__nc|ENSG00000089639|Q9P107-2|GMIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.2542419433594	2	421.253769	840.492984	0.58556	0.00024667	0.1281	5.3962E-05	0.71366	0.00030063	421.25366472055117	84.161	1.6821	84.309	83.832	85.514	0.14794					87	38	3	0	0	0	0.81897	1	8178	8178		20.947	0.4651	1	609670	+		12893	16972	8871	8879	14767	14767					0.06635757539982023
GRLSKCGI	8	Unmodified	_GRLSKCGI_					0	0	0		ENST00000529433.5_1_11:1478266-1482216:+|nuORF;nc|ENSG00000174672|Q8IWQ3-3|BRSK2	ENST00000529433.5_1_11:1478266-1482216:+|nuORF	ENST00000529433.5_1_11:1478266-1482216:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.23992919921875	2	417.23673	832.458907	3.0856	0.0012874	3.1331	0.0013073	6.2187	0.0025947	417.2376917787685	88.314	2.8848	88.365	87.296	90.181	0.050415					161	67	3	0	0	0	0.89494	1	9045	9045		37.159	5.2042	1	1607200			12894	13325	8872	8880	14768	14768					0.035975930567246905
GRLSMKLLLH	10	Unmodified	_GRLSMKLLLH_					0	0	0			REV__ENST00000309295.8_1_11:65347425-65347639:+|nuORF	REV__ENST00000309295.8_1_11:65347425-65347639:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	584.3563232421875	2	584.355168	1166.69578	-1.3402	-0.00078317	2.7515	0.0016079	1.4113	0.00082469	584.3568464329793	92.429	3.0691	92.615	91.162	94.231	0.18582					184	72	3	0	0	0	0.8651	1	9306	9306		25.574	1.0549	1	728420	+		12895	24868	8873	8881	14769	14769					0.11910319550270287
GRLSNLSLET	10	Unmodified	_GRLSNLSLET_					0	0	0		ENSG00000279804|ENST00000624297|PRAMEF18;ENSG00000204480|ENST00000376101|PRAMEF19	ENSG00000279804|ENST00000624297|PRAMEF18	ENSG00000279804|ENST00000624297|PRAMEF18	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2586669921875	2	545.29857	1088.58259	-0.81746	-0.00044576	4.2749	0.0023311	3.4575	0.0018854	545.3008207344076	59.714	0.46407	60.267	60.038	60.502	0.55323					25	11	3	0	0	0	0.37624	1	6297	6297		37.812	13.292	1	501660			12896	9047	8874	8882	14770	14770					0.04183922638048898
GRLSPAPKKER	11	Unmodified	_GRLSPAPKKER_					0	0	0			REV__ENST00000262662.5_1_1:51434456-51434999:+|nuORF	REV__ENST00000262662.5_1_1:51434456-51434999:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.868896484375	2	619.870028	1237.7255	-0.2143	-0.00013284	-0.85851	-0.00053217	-1.0728	-0.000665	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.638	1	9454	9454		40.058	7.2458	1	1169100	+		12897	24429	8875	8883	14771	14771					0.11614974819917734
GRLTALLGSTT	11	Unmodified	_GRLTALLGSTT_					0	0	0		ENST00000361171.7_1_9:129266081-129266318:+|nuORF	ENST00000361171.7_1_9:129266081-129266318:+|nuORF	ENST00000361171.7_1_9:129266081-129266318:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3172607421875	2	545.316763	1088.61897	0.15577	8.4944E-05	-0.048112	-2.6236E-05	0.10766	5.8708E-05	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.67778	1	9367	9367		35.152	0.97948	1	17220000			12898	10467	8876	8884	14772	14772					0.07820799534783873
GRLTALLGSTT	11	Unmodified	_GRLTALLGSTT_					0	0	0		ENST00000361171.7_1_9:129266081-129266318:+|nuORF	ENST00000361171.7_1_9:129266081-129266318:+|nuORF	ENST00000361171.7_1_9:129266081-129266318:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.316650390625	2	545.316763	1088.61897	-1.3538	-0.00073823	1.329	0.00072474	-0.024734	-1.3488E-05	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.66009	1	10536	10536		37.508	5.9784	1	5184000			12899	10467	8876	8884	14773	14773					0.07820799534783873
GRLTKHTT	8	Unmodified	_GRLTKHTT_					0	0	0			REV__nc|ENSG00000182199|P34897-3|SHMT2;REV__nc|ENSG00000176974|P34896-4|SHMT1	REV__nc|ENSG00000182199|P34897-3|SHMT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2641906738281	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.86677	1	7646	7646		27.882	2.4321	1	2957200	+		12900	22508;22166	8877	8885	14774	14774					0.054357228488470355
GRLTKHTT	8	Unmodified	_GRLTKHTT_					0	0	0			REV__nc|ENSG00000182199|P34897-3|SHMT2;REV__nc|ENSG00000176974|P34896-4|SHMT1	REV__nc|ENSG00000182199|P34897-3|SHMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26361083984375	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.86677	2	7663	7663;7698		27.882	1.0861	1	1329900	+		12901	22508;22166	8877	8885	14775;14776	14775					0.054357228488470355
GRLTKHTT	8	Unmodified	_GRLTKHTT_					0	0	0			REV__nc|ENSG00000182199|P34897-3|SHMT2;REV__nc|ENSG00000176974|P34896-4|SHMT1	REV__nc|ENSG00000182199|P34897-3|SHMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2627868652344	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.84341	2	8258	7979;8258		30.504	3.7075	1	4732500	+		12902	22508;22166	8877	8885	14777;14778	14778					0.054357228488470355
GRLTRRPSF	9	Unmodified	_GRLTRRPSF_					0	0	0		ENSG00000275832|ENST00000622683|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.3328247070312	2	545.317432	1088.62031	-0.33394	-0.00018211	0.93697	0.00051095	0.60302	0.00032884	545.3179493671634	98.966	0.9642	99.016	98.351	99.315	0.04982					27	21	2	0	0	0	0.20789	1	10409	10409		12.812	0	1	86686			12903	9007	8878	8886	14779	14779					0.07954478414171717
GRLTRRPSF	9	Unmodified	_GRLTRRPSF_					0	0	0		ENSG00000275832|ENST00000622683|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.3328247070312	2	545.317432	1088.62031	-0.33302	-0.0001816	-0.83154	-0.00045346	-1.1646	-0.00063506	545.3168559821565	97.379	1.546	97.441	96.994	98.54	0.062233					61	35	2	0	0	0	0.20789	1	10409	10409		12.812	0	1	95507			12904	9007	8878	8886	14780	14780					0.07954478414171717
GRLTVFVIN	9	Unmodified	_GRLTVFVIN_					0	0	0			REV__ENSG00000065183|ENST00000349139|WDR3	REV__ENSG00000065183|ENST00000349139|WDR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.80364990234375	2	509.805834	1017.59712	-1.4574	-0.000743	-2.7703	-0.0014123	-4.2277	-0.0021553	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.76764	1	8273	8273		34.173	2.2177	1	920080	+		12905	16494	8879	8887	14781	14781					0.08902039576832976
GRLVAKATN	9	Unmodified	_GRLVAKATN_					0	0	0			REV__L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|56|3|sense	REV__L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|56|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.2799987792969	2	465.279983	928.545414	-1.728	-0.00080402	1.7949	0.00083513	0.066852	3.1105E-05	465.28067924301723	88.748	2.0508	88.921	88.498	90.549	0.17234					103	47	4	0	0	0	0.69624	1	8784	8784		40.778	11.629	1	1028800	+		12906	29547	8880	8888	14782	14782					0.07828295882927705
GRLVFRQR	8	Unmodified	_GRLVFRQR_					0	0	0		ENST00000301740.12_1_16:2802462-2802633:+|nuORF	ENST00000301740.12_1_16:2802462-2802633:+|nuORF	ENST00000301740.12_1_16:2802462-2802633:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.314697265625	2	516.314692	1030.61483	-1.5618	-0.0008064	-0.1719	-8.8755E-05	-1.7337	-0.00089516	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.87479	1	10392	10392		30.504	0.18592	1	66055000			12907	9808	8881	8889	14783	14783					0.10074799622361752
GRLVGLNVF	9	Unmodified	_GRLVGLNVF_					0	0	0		nc|ENSG00000188107|Q5T1H1|EYS;ENSG00000188107|ENST00000503581|EYS	nc|ENSG00000188107|Q5T1H1|EYS	nc|ENSG00000188107|Q5T1H1|EYS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.79083251953125	2	487.792727	973.5709	-0.70733	-0.00034503	-3.6605	-0.0017856	-4.3678	-0.0021306	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.78058	1	8226	8226		30.504	0	1	2348200			12908	15168	8882	8890	14784	14784					0.08305770405377189
GRLVNLIFS	9	Unmodified	_GRLVNLIFS_					0	0	0			REV__nc|ENSG00000099998|P36269-2|GGT5	REV__nc|ENSG00000099998|P36269-2|GGT5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8036193847656	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.78983	1	8452	8452		27.882	1.1893	1	2989000	+		12909	17123	8883	8891	14785	14785					0.08902039576855714
GRLWAAGT	8	Unmodified	_GRLWAAGT_					0	0	0		ENSG00000149654|ENST00000537909|CDH22	ENSG00000149654|ENST00000537909|CDH22	ENSG00000149654|ENST00000537909|CDH22	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	416.22772216796875	2	416.22722	830.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.202	1	35.24	34.74	35.74	0.038643								0	0	0	0.29264	1	1832	1832		29.15	0	1				12910	5044	8884	8892	14786	14786					0.017883797573290394
GRMDHKSF	8	Unmodified	_GRMDHKSF_					0	0	0		nc|ENSG00000176406|Q9UQ26-3|RIMS2;nc|ENSG00000176406|Q9UQ26-1|RIMS2;nc|ENSG00000176406|Q9UQ26-8|RIMS2;nc|ENSG00000176406|Q9UQ26|RIMS2;ENSG00000176406|ENST00000696799|RIMS2;nc|ENSG00000176406|Q9UQ26-7|RIMS2	nc|ENSG00000176406|Q9UQ26-3|RIMS2	nc|ENSG00000176406|Q9UQ26-3|RIMS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.2363586425781	2	489.234719	976.454884	-0.22761	-0.00011136	3.7202	0.00182	3.4926	0.0017087	489.2364963124142	86.068	2.1429	86.511	85.703	87.846	0.44331					118	51	4	0	0	0	0.91982	1	10076	10076		45.972	7.1661	1	3099300			12911	7079	8885	8893	14787	14787					-0.03428496436981732
GRMFILGL	8	Unmodified	_GRMFILGL_					0	0	0			REV__ENSG00000232030|ENST00000416929|MAGEB6B	REV__ENSG00000232030|ENST00000416929|MAGEB6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.76519775390625	2	453.765123	905.515694	0.21911	9.9423E-05	1.0227	0.00046406	1.2418	0.00056348	453.7653867501488	40.992	0.89008	41.065	40.735	41.626	0.073414					74	28	3	0	0	0	0.87276	1	2677	2677		29.842	1.5873	1	782930	+		12912	23767	8886	8894	14788	14788					0.0591564061326153
GRMPAPAL	8	Unmodified	_GRMPAPAL_					0	0	0		ENST00000525088.5_1_11:67202187-67202637:+|nuORF	ENST00000525088.5_1_11:67202187-67202637:+|nuORF	ENST00000525088.5_1_11:67202187-67202637:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.72900390625	2	406.725998	811.437443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.539	1	76.587	76.087	77.087	0.047981								0	0	0	0.30125	1	7484	7484		20.482	1.1219	1				12913	13229	8887	8895	14789	14789					0.024182080279956608
GRMQSVTLN	9	Unmodified	_GRMQSVTLN_					0	0	0		ENST00000605834.1_1_4:185397754-185397856:+|nuORF	ENST00000605834.1_1_4:185397754-185397856:+|nuORF	ENST00000605834.1_1_4:185397754-185397856:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.8055419921875	2	503.260933	1004.50731	1.0205	0.0005136	-4.068	-0.0020473	-3.0474	-0.0015337	503.25857659261686	32.017	0.47223	32.124	31.845	32.317	0.10707					16	10	2	0	0	0	0.20789	1	2233	2233		24.519	10.382	1	166680			12914	14437	8888	8896	14790	14790					0.0052404190596462286
GRNDVACSF	9	Unmodified	_GRNDVACSF_					0	0	0			REV__ENST00000508820.1_1_6:97720576-97730353:-|nuORF	REV__ENST00000508820.1_1_6:97720576-97730353:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7178955078125	2	484.716359	967.418164	1.6171	0.00078385	2.2868	0.0011084	3.9039	0.0018923	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.76255	1	11652	11652		35.618	0	1	7541600	+		12915	20002	8889	8897	14791	14791					-0.06684793053545945
GRNGGHGGAPG	11	Unmodified	_GRNGGHGGAPG_					0	0	0			REV__nc|ENSG00000174953|Q9H2U1-3|DHX36	REV__nc|ENSG00000174953|Q9H2U1-3|DHX36	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.7232360839844	2	468.723364	935.432175	-1.7004	-0.00079701	1.6749	0.00078504	-0.02554	-1.1971E-05	468.7240064576144	87.428	1.1146	87.597	87.22	88.335	0.16922					46	25	3	0	0	0	0.72228	1	8599	8599		27.882	2.3082	1	526730	+		12916	22030	8890	8898	14792	14792					-0.03812379510247865
GRNMLFEKAST	11	Unmodified	_GRNMLFEKAST_					0	0	0			REV__ENSG00000218819|ENST00000405799|TDRD15	REV__ENSG00000218819|ENST00000405799|TDRD15	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3195190429688	2	627.31898	1252.62341	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.942	1	61.972	61.472	62.472	0.029575								0	0	0	0.56276	1	5781	5781		42.864	2.0861	1		+		12917	23699	8891	8899	14793	14793					0.007199406860081581
GRNPQASLF	9	Unmodified	_GRNPQASLF_					0	0	0		ENSG00000105397|ENST00000525621|TYK2	ENSG00000105397|ENST00000525621|TYK2	ENSG00000105397|ENST00000525621|TYK2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2600402832031	2	495.261791	988.509028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.025	1	35.273	34.773	35.773	0.24769								0	0	0	0.29273	1	2642	2642		40.778	10.275	1				12918	2213	8892	8900	14794	14794					0.014314189862261628
GRNWLHKAN	9	Unmodified	_GRNWLHKAN_					0	0	0		ENSG00000165392|ENST00000298139|WRN	ENSG00000165392|ENST00000298139|WRN	ENSG00000165392|ENST00000298139|WRN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.293212890625	2	548.293956	1094.57336	-1.2455	-0.00068291	3.5194	0.0019297	2.2739	0.0012467	548.2957876892873	49.467	0.69822	49.467	49.229	49.927	0					25	15	2	0	0	0	0.62081	1	3889	3889		45.952	11.779	1	126160			12919	6079	8893	8901	14795	14795					0.029856188630446923
GRPAGHLN	8	Unmodified	_GRPAGHLN_					0	0	0		ENST00000403796.6_1_11:124932967-124946675:+|nuORF	ENST00000403796.6_1_11:124932967-124946675:+|nuORF	ENST00000403796.6_1_11:124932967-124946675:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	411.21734619140625	2	411.222469	820.430384	3.0004	0.0012338	-2.8124	-0.0011565	0.18794	7.7287E-05	411.2209736113263	87.027	0.99088	87.082	86.567	87.558	0.055641					38	22	3	0	0	0	0.8347	1	8895	8895		23.042	2.5607	1	257350			12920	11256	8894	8902	14796	14796					0.012986114718046338
GRPFLPLPPSL	11	Unmodified	_GRPFLPLPPSL_					0	0	0		ENST00000339174.9_2_Y:16636616-16734060:+|nuORF	ENST00000339174.9_2_Y:16636616-16734060:+|nuORF	ENST00000339174.9_2_Y:16636616-16734060:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8557739257812	2	597.355691	1192.69683	0.9357	0.00055895	-0.77395	-0.00046233	0.16175	9.662E-05	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.70737	1	9510	9510		30.318	0	1	19058000			12921	10215	8895	8903	14797	14797					0.10818857190793096
GRPFLPLPPSL	11	Unmodified	_GRPFLPLPPSL_					0	0	0		ENST00000339174.9_2_Y:16636616-16734060:+|nuORF	ENST00000339174.9_2_Y:16636616-16734060:+|nuORF	ENST00000339174.9_2_Y:16636616-16734060:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3593139648438	2	597.355691	1192.69683	1.5032	0.00089792	-0.8644	-0.00051635	0.63877	0.00038157	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.7342	1	10881	10881		25.574	2.0514	1	1501500			12922	10215	8895	8903	14798	14798					0.10818857190793096
GRPLGPRPG	9	Unmodified	_GRPLGPRPG_					0	0	0			REV__ENST00000255198.2_2_5:76373098-76373719:-|nuORF	REV__ENST00000255198.2_2_5:76373098-76373719:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.7659606933594	2	453.767043	905.519533	0.27129	0.0001231	-3.0095	-0.0013656	-2.7382	-0.0012425	453.76550964369613	41.947	1.1764	41.916	41.067	42.244	-0.030991					46	29	2	0	0	0	0.72402	1	3069	3069		38.806	6.8513	1	291970	+		12923	24318	8896	8904	14799	14799					0.06299446431319211
GRPLGPRPG	9	Unmodified	_GRPLGPRPG_					0	0	0			REV__ENST00000255198.2_2_5:76373098-76373719:-|nuORF	REV__ENST00000255198.2_2_5:76373098-76373719:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.7659912109375	2	453.767043	905.519533	-1.2902	-0.00058543	-2.2694	-0.0010298	-3.5595	-0.0016152	453.76607829009424	41.177	0.83587	41.181	40.825	41.661	0.0043983					78	27	4	0	0	0	0.64922	2	2701	2663;2701		44.117	12.162	1	657720	+		12924	24318	8896	8904	14800;14801	14801					0.06299446431319211
GRPLGPRPG	9	Unmodified	_GRPLGPRPG_					0	0	0			REV__ENST00000255198.2_2_5:76373098-76373719:-|nuORF	REV__ENST00000255198.2_2_5:76373098-76373719:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.76580810546875	2	453.767043	905.519533	-0.098866	-4.4862E-05	-2.9209	-0.0013254	-3.0198	-0.0013703	453.7655359393201	41.096	0.91404	41.05	40.674	41.588	-0.045467					76	30	3	0	0	0	0.78058	1	2697	2697		30.504	1.3541	1	750830	+		12925	24318	8896	8904	14802	14802					0.06299446431319211
GRPLQVPKKNA	11	Unmodified	_GRPLQVPKKNA_					0	0	0			REV__nc|ENSG00000132964|P49336-2|CDK8	REV__nc|ENSG00000132964|P49336-2|CDK8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3663330078125	2	604.367121	1206.71969	-1.2753	-0.00077072	2.0599	0.001245	0.78468	0.00047424	604.36822927736	113.15	0.20975	113.12	113.01	113.22	-0.032326					8	5	2	0	0	0	0.76322	1	12082	12082		19.104	3.4617	1	2592600	+		12926	19048	8897	8905	14803	14803					0.12459876308275852
GRPLQVPKKNA	11	Unmodified	_GRPLQVPKKNA_					0	0	0			REV__nc|ENSG00000132964|P49336-2|CDK8	REV__nc|ENSG00000132964|P49336-2|CDK8	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	604.367121	1206.71969	-1.2753	-0.00077072	2.0599	0.001245	0.78468	0.00047424	604.36822927736	113.15	0.20975	113.12	113.01	113.22	-0.032326	0.13246	0.0018575	NaN	19.104	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2592600	+		12927	19048	8897	8905							0.12459876308275852
GRPMVYGPG	9	Unmodified	_GRPMVYGPG_					0	0	0			REV__ENST00000572144.5_1_16:67964925-67965033:-|nuORF	REV__ENST00000572144.5_1_16:67964925-67965033:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.23345947265625	2	467.234187	932.453822	-0.78555	-0.00036704	-0.89389	-0.00041766	-1.6794	-0.00078469	467.2336097851308	69.799	1.6914	69.762	69.451	71.142	-0.036964					147	87	2	0	0	0	0.69914	1	6795	6795		40.573	0	1	4050000	+		12928	28941	8898	8906	14804	14804					-0.01510710805882809
GRPPPRPP	8	Unmodified	_GRPPPRPP_					0	0	0			REV__ENST00000519716.6_1_19:17715745-17715967:-|nuORF	REV__ENST00000519716.6_1_19:17715745-17715967:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77142333984375	2	437.256311	872.49807	-0.09395	-4.108E-05	-0.24205	-0.00010584	-0.336	-0.00014692	437.25557451918564	39.583	0.35242	39.535	39.34	39.692	-0.04789					11	8	2	0	0	0	0.4196	1	2444	2444		6.7355	0	1	17431	+		12929	19552	8899	8907	14805	14805					0.056720614025948635
GRPPVRHASL	10	Unmodified	_GRPPVRHASL_					0	0	0			REV__ENST00000374791.7_1_11:132205045-132205564:+|nuORF	REV__ENST00000374791.7_1_11:132205045-132205564:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.3170776367188	2	545.317432	1088.62031	0.73643	0.00040159	-2.1406	-0.0011673	-1.4042	-0.00076572	545.316117867523	88.493	3.0395	88.643	86.614	89.654	0.15055					258	71	4	0	0	0	0.86471	1	8579	8579		30.318	1.1682	1	5181100	+		12930	25796	8900	8908	14806	14806					0.07954478414171717
GRPQPEVSEQ	10	Unmodified	_GRPQPEVSEQ_					0	0	0			REV__nc|ENSG00000140265|Q8IWY8-4|ZSCAN29	REV__nc|ENSG00000140265|Q8IWY8-4|ZSCAN29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.7786865234375	2	563.778002	1125.54145	1.0624	0.00059895	-0.42466	-0.00023942	0.63773	0.00035954	563.7771928359884	25.681	0.52278	25.649	25.398	25.921	-0.032125					27	15	2	0	0	0	0.47091	1	1035	1035		58.23	5.141	1	68855	+		12931	19602	8901	8909	14807	14807					-0.016298384014362455
GRPRHSARR	9	Unmodified	_GRPRHSARR_					0	0	0		ENST00000398637.9_1_12:46662402-46662591:-|nuORF	ENST00000398637.9_1_12:46662402-46662591:-|nuORF	ENST00000398637.9_1_12:46662402-46662591:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8191528320312	2	546.815922	1091.61729	0.69695	0.0003811	1.8993	0.0010386	2.5962	0.0014197	546.8168015948943	15.861	0.29414	15.939	15.814	16.108	0.077959					21	12	2	0	0	0	0.71772	1	56	56		39.253	4.1008	1	116450			12932	11186	8902	8910	14808	14808					0.0751464808001856
GRPRLTSN	8	Unmodified	_GRPRLTSN_					0	0	0		ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889791-118894106:+|nuORF;ENSG00000196655|ENST00000533632|TRAPPC4	ENST00000447216.2_1_11:118889505-118891019:+|nuORF	ENST00000447216.2_1_11:118889505-118891019:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7544860839844	2	450.754133	899.493713	-1.264	-0.00056978	1.3912	0.00062708	0.12712	5.7301E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.89043	1	7446	7446		35.618	0.41757	1	414240			12933	8087	8903	8911	14809	14809					0.039945521890217606
GRPRRCQWR	9	Unmodified	_GRPRRCQWR_					0	0	0		ENST00000354371.6_1_2:237994566-237994623:+|nuORF	ENST00000354371.6_1_2:237994566-237994623:+|nuORF	ENST00000354371.6_1_2:237994566-237994623:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.5535888671875	3	405.552714	1213.63631	0.59269	0.00024037	-0.9982	-0.00040482	-0.40551	-0.00016446	405.5523269463935	28.869	3.2114	28.696	27.713	30.924	-0.17336					183	75	5	0	0	0	0.78124	1	1749	1749		30.318	2.6738	1	9724600			12934	10336	8904	8912	14810	14810					0.038038613794014964
GRPRRVIH	8	Unmodified	_GRPRRVIH_					0	0	0			REV__ENST00000375377.1_1_10:30336542-30336710:-|nuORF	REV__ENST00000375377.1_1_10:30336542-30336710:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.6873474121094	2	495.807034	989.599515	-1.384	-0.0006862	-0.53052	-0.00026304	-1.9145	-0.00094923	495.80691018855475	90.914	1.0093	91.385	90.932	91.942	0.47068					60	24	4	0	0	0	0.4196	1	10884	10884		26.796	0	1	481410	+		12935	25812	8905	8913	14811	14811					0.10429932825161359
GRPRVVAS	8	Unmodified	_GRPRVVAS_					0	0	0			REV__ENST00000323798.7_1_19:49490451-49490544:-|nuORF	REV__ENST00000323798.7_1_19:49490451-49490544:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.25445556640625	2	421.253769	840.492984	-0.18708	-7.8807E-05	0.65223	0.00027475	0.46515	0.00019595	421.25387987106194	84.393	1.9611	84.46	83.811	85.772	0.067177					92	44	3	0	0	0	0.86288	1	8453	8453		26.796	8.4717	1	712040	+		12936	25035	8906	8914	14812	14812					0.06635757539982023
GRPRVVAS	8	Unmodified	_GRPRVVAS_					0	0	0			REV__ENST00000323798.7_1_19:49490451-49490544:-|nuORF	REV__ENST00000323798.7_1_19:49490451-49490544:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.2543029785156	2	421.253769	840.492984	-1.773	-0.00074688	2.2835	0.00096195	0.51053	0.00021506	421.25456874716457	84.085	1.5006	84.252	83.669	85.17	0.16721					78	34	3	0	0	0	0.84341	1	8149	8149		24.203	1.1603	1	757090	+		12937	25035	8906	8914	14813	14813					0.06635757539982023
GRPRVVAS	8	Unmodified	_GRPRVVAS_					0	0	0			REV__ENST00000323798.7_1_19:49490451-49490544:-|nuORF	REV__ENST00000323798.7_1_19:49490451-49490544:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.2542724609375	2	421.253769	840.492984	-1.7494	-0.00073696	2.1586	0.00090931	0.40915	0.00017236	421.25452750849325	84.126	1.3912	84.264	83.786	85.177	0.13811					78	31	3	0	0	0	0.84341	1	8137	8137		24.203	3.2558	1	553140	+		12938	25035	8906	8914	14814	14814					0.06635757539982023
GRPTRVRSPLL	11	Unmodified	_GRPTRVRSPLL_					0	0	0		ENST00000359727.8_1_15:23027909-23034200:-|nuORF;ENST00000560205.5_1_15:23033382-23034200:-|nuORF	ENST00000359727.8_1_15:23027909-23034200:-|nuORF	ENST00000359727.8_1_15:23027909-23034200:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3886108398438	2	626.385845	1250.75714	2.3128	0.0014487	-2.3561	-0.0014758	-0.043276	-2.7107E-05	626.8860681580434	110.01	1.5052	110.06	109.66	111.17	0.054062					106	56	2	0	0	0	0.7434	1	13281	13281		23.523	1.5628	1	1083000			12939	10435	8907	8915	14815	14815					0.14178967573911905
GRPVKKNGT	9	Unmodified	_GRPVKKNGT_					0	0	0		ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.7857666015625	2	478.785433	955.556313	0.70537	0.00033772	0.63532	0.00030418	1.3407	0.0006419	478.78492064616836	92.181	2.2722	92.339	91.473	93.745	0.15829					125	53	4	0	0	0	0.76255	1	9305	9305		35.618	5.1146	1	756310			12940	11747	8908	8916	14816	14816					0.07675698257230579
GRQGDNCDC	9	Unmodified	_GRQGDNCDC_					0	0	0		ENSG00000175426|ENST00000311106|PCSK1;nc|ENSG00000175426|P29120-2|PCSK1	ENSG00000175426|ENST00000311106|PCSK1	ENSG00000175426|ENST00000311106|PCSK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2362060546875	2	484.171458	966.328363	-0.54426	-0.00026351	2.3092	0.0011181	1.765	0.00085455	484.17256895115355	84.888	0.27887	85.336	85.115	85.394	0.44736					8	6	2	0	0	0	0.20789	1	9928	9928		16.473	0	1	183220			12941	7015	8909	8917	14817	14817					-0.15614790724441718
GRQLAMYE	8	Unmodified	_GRQLAMYE_					0	0	0		ENST00000411929.5_1_2:118846089-118865895:+|nuORF;ENST00000467223.5_1_2:118846216-118865895:+|nuORF;ENSG00000125629|ENST00000245787|INSIG2	ENST00000411929.5_1_2:118846089-118865895:+|nuORF	ENST00000411929.5_1_2:118846089-118865895:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2364501953125	2	484.236927	966.459301	-0.53754	-0.00026029	-2.2523	-0.0010907	-2.7899	-0.001351	484.2362894528465	84.849	1.2824	85.296	84.912	86.194	0.44736					130	31	5	0	0	0	0.9295	1	9892	9892		55.504	0	1	48085000			12942	3398	8910	8918	14818	14818					-0.025270320140862168
GRQLIAKES	9	Unmodified	_GRQLIAKES_					0	0	0			REV__ENSG00000167077|ENST00000401548|MEI1	REV__ENSG00000167077|ENST00000401548|MEI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2908630371094	2	501.290548	1000.56654	1.9814	0.00099324	-1.7904	-0.00089752	0.19096	9.5726E-05	501.2894698327482	99.155	1.1501	99.518	99.094	100.24	0.36292					59	28	3	0	0	0	0.76255	1	12010	12010		35.618	1.4457	1	1034500	+		12943	21349	8911	8919	14819	14819					0.06628261191792717
GRQSPCQTV	9	Unmodified	_GRQSPCQTV_					0	0	0		ENST00000575331.1_1_17:7342939-7343908:+|nuORF	ENST00000575331.1_1_17:7342939-7343908:+|nuORF	ENST00000575331.1_1_17:7342939-7343908:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	488.23858642578125	2	488.237458	974.460364	0.42909	0.0002095	2.4196	0.0011813	2.8486	0.0013908	488.2385342290814	60.594	0.80984	60.711	60.313	61.123	0.11676					92	32	5	0	0	0	0.66686	1	5259	5259		42.864	5.7052	1	1254500			12944	14047	8912	8920	14820	14820					-0.027888176451710933
GRRAALAGLLR	11	Unmodified	_GRRAALAGLLR_					0	0	0			REV__ENSG00000182612|ENST00000611590|TSPAN10	REV__ENSG00000182612|ENST00000611590|TSPAN10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	577.3663330078125	2	577.367456	1152.72036	0.74115	0.00042792	-2.508	-0.0014481	-1.7669	-0.0010201	577.3658570064985	102.18	2.9839	102.23	101.81	104.79	0.043198					214	72	5	0	0	0	0.75921	1	11109	11109		19.997	2.6318	1	10154000	+		12945	22535	8913	8921	14821	14821					0.15010715747962422
GRRAALAGLLR	11	Unmodified	_GRRAALAGLLR_					0	0	0			REV__ENSG00000182612|ENST00000611590|TSPAN10	REV__ENSG00000182612|ENST00000611590|TSPAN10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	577.366943359375	2	577.367456	1152.72036	0.87834	0.00050713	-2.6389	-0.0015236	-1.7606	-0.0010165	577.3658132315567	102.16	3.1638	102.3	101.85	105.01	0.13522					236	78	5	0	0	0	0.76322	1	10835	10835		19.104	2.6304	1	15036000	+		12946	22535	8913	8921	14822	14822					0.15010715747962422
GRRAGLGF	8	Unmodified	_GRRAGLGF_					0	0	0		ENST00000358635.7_1_4:140005384-140005639:-|nuORF	ENST00000358635.7_1_4:140005384-140005639:-|nuORF	ENST00000358635.7_1_4:140005384-140005639:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2396545410156	2	417.240661	832.46677	-1.8972	-0.0007916	-2.0483	-0.00085464	-3.9456	-0.0016462	417.23961166922066	88.228	1.9938	88.397	87.781	89.775	0.16923					117	46	5	0	0	0	0.87276	1	8707	8707		29.842	0	1	1025300			12947	10413	8914	8922	14823	14823					0.043834883685121895
GRRAGRLPNRL	11	Unmodified	_GRRAGRLPNRL_					0	0	0		ENST00000352681.7_2_16:727083-728243:+|nuORF	ENST00000352681.7_2_16:727083-728243:+|nuORF	ENST00000352681.7_2_16:727083-728243:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.8836669921875	2	633.386711	1264.75887	0.057861	3.6648E-05	-3.0375	-0.0019239	-2.9796	-0.0018873	633.3846817447454	53.012	1.6223	52.937	52.379	54.001	-0.074509					54	43	2	0	0	0	0.71803	1	4363	4363		19.104	4.2386	1	143430			12948	10327	8915	8923	14824	14824					0.13708021382512925
GRRAGRRVPR	10	Unmodified	_GRRAGRRVPR_					0	0	0			REV__ENST00000334176.3_1_19:33166647-33167097:+|nuORF	REV__ENST00000334176.3_1_19:33166647-33167097:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8670654296875	2	590.865946	1179.71734	-0.76513	-0.00045209	1.4736	0.00087069	0.70844	0.00041859	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.8651	1	11462	11462		25.574	1.0549	1	54208000	+		12949	25153	8916	8924	14825	14825					0.13466885413822638
GRRAGRRVPR	10	Unmodified	_GRRAGRRVPR_					0	0	0			REV__ENST00000334176.3_1_19:33166647-33167097:+|nuORF	REV__ENST00000334176.3_1_19:33166647-33167097:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.86669921875	2	590.865946	1179.71734	0.89156	0.00052679	-0.12756	-7.5373E-05	0.764	0.00045142	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.80179	2	10943	10943;11161		39.253	2.8061	1	84183000	+		12950	25153	8916	8924	14826;14827	14826					0.13466885413822638
GRRAGRRVPR	10	Unmodified	_GRRAGRRVPR_					0	0	0			REV__ENST00000334176.3_1_19:33166647-33167097:+|nuORF	REV__ENST00000334176.3_1_19:33166647-33167097:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8671875	2	590.865946	1179.71734	-1.319	-0.00077937	2.1106	0.0012471	0.79159	0.00046772	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.86589	1	11040	11040		29.15	1.2673	1	81379000	+		12951	25153	8916	8924	14828	14828					0.13466885413822638
GRRAGRRVPR	10	Unmodified	_GRRAGRRVPR_					0	0	0			REV__ENST00000334176.3_1_19:33166647-33167097:+|nuORF	REV__ENST00000334176.3_1_19:33166647-33167097:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8668823242188	2	590.865946	1179.71734	1.3812	0.0008161	0.045295	2.6763E-05	1.4265	0.00084286	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.8608	1	12609	12609		34.173	1.3601	1	6168400	+		12952	25153	8916	8924	14829	14829					0.13466885413822638
GRRAGVVP	8	Unmodified	_GRRAGVVP_					0	0	0			REV__nc|ENSG00000085644|O14771-2|ZNF213	REV__nc|ENSG00000085644|O14771-2|ZNF213	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2483215332031	2	406.248486	810.48242	1.1517	0.00046786	-0.91843	-0.00037311	0.23322	9.4746E-05	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.81548	2	9335	9250;9335		35.201	1.6851	1	58759000	+		12953	16895	8917	8925	14830;14831	14831					0.06959774885558545
GRRAGVVP	8	Unmodified	_GRRAGVVP_					0	0	0			REV__nc|ENSG00000085644|O14771-2|ZNF213	REV__nc|ENSG00000085644|O14771-2|ZNF213	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24835205078125	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.81548	2	9156	9156;9216		26.796	7.4361	1	56664000	+		12954	16895	8917	8925	14832;14833	14832					0.06959774885558545
GRRAGVVP	8	Unmodified	_GRRAGVVP_					0	0	0			REV__nc|ENSG00000085644|O14771-2|ZNF213	REV__nc|ENSG00000085644|O14771-2|ZNF213	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24853515625	2	406.248486	810.48242	3.1803	0.001292	-2.4584	-0.00099873	0.7219	0.00029327	406.2473607643489	90.704	2.3213	90.75	90.262	92.583	0.046448					123	55	3	0	0	0	0.80706	1	9410	9410		19.36	0	1	1081600	+		12955	16895	8917	8925	14834	14834					0.06959774885558545
GRRAGVVP	8	Unmodified	_GRRAGVVP_					0	0	0			REV__nc|ENSG00000085644|O14771-2|ZNF213	REV__nc|ENSG00000085644|O14771-2|ZNF213	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24871826171875	2	406.248486	810.48242	3.1805	0.0012921	-2.5321	-0.0010287	0.64845	0.00026343	406.2473596194762	111.52	0.96954	111.55	111.15	112.12	0.030388					88	37	3	0	0	0	0.81724	1	12233	12233		14.664	5.1935	1	158570	+		12956	16895	8917	8925	14835	14835					0.06959774885558545
GRRAGVVP	8	Unmodified	_GRRAGVVP_					0	0	0			REV__nc|ENSG00000085644|O14771-2|ZNF213	REV__nc|ENSG00000085644|O14771-2|ZNF213	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2482604980469	2	406.248486	810.48242	0.64458	0.00026186	0.020564	8.3542E-06	0.66515	0.00027022	406.248379767224	90.786	2.0194	90.94	90.429	92.448	0.15388					81	48	3	0	0	0	0.81724	1	9095	9095		14.664	0.88877	1	878080	+		12957	16895	8917	8925	14836	14836					0.06959774885558545
GRRALVTSA	9	Unmodified	_GRRALVTSA_					0	0	0		ENST00000460680.5_1_3:52444021-52444105:-|nuORF	ENST00000460680.5_1_3:52444021-52444105:-|nuORF	ENST00000460680.5_1_3:52444021-52444105:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7772521972656	2	465.777608	929.540663	-0.11871	-5.5291E-05	0.041983	1.9555E-05	-0.076723	-3.5736E-05	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.78983	1	8237	8237		27.882	5.9224	1	1083800			12958	12010	8918	8926	14837	14837					0.07307411740180214
GRRAPRGVRR	10	Unmodified	_GRRAPRGVRR_					0	0	0		ENST00000312960.3_1_3:150480604-150481030:-|nuORF	ENST00000312960.3_1_3:150480604-150481030:-|nuORF	ENST00000312960.3_1_3:150480604-150481030:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8671875	2	590.865946	1179.71734	0.84845	0.00050132	-0.15772	-9.3192E-05	0.69073	0.00040813	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.8608	1	11108	11108		34.173	0	1	94771000			12959	9944	8919	8927	14838	14838					0.13466885413822638
GRRAPRGVRR	10	Unmodified	_GRRAPRGVRR_					0	0	0		ENST00000312960.3_1_3:150480604-150481030:-|nuORF	ENST00000312960.3_1_3:150480604-150481030:-|nuORF	ENST00000312960.3_1_3:150480604-150481030:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.867431640625	2	590.865946	1179.71734	3.2055	0.001894	-1.8055	-0.0010668	1.4	0.00082723	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.8608	1	12549	12549		34.173	0	1	6398400			12960	9944	8919	8927	14839	14839					0.13466885413822638
GRRATAQPLRR	11	Unmodified	_GRRATAQPLRR_					0	0	0			REV__ENST00000260126.8_1_8:70745059-70745305:-|nuORF	REV__ENST00000260126.8_1_8:70745059-70745305:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.38427734375	2	641.384168	1280.75378	0.94064	0.00060331	-0.47599	-0.00030529	0.46465	0.00029802	641.3834906355922	102.59	0.76495	102.72	102.3	103.06	0.13293					58	18	4	0	0	0	0.68532	1	10817	10817		33.922	2.3918	1	1429800	+		12961	24364	8920	8928	14840	14840					0.12463717519835882
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7690124511719	2	470.769783	939.525013	-1.6002	-0.00075333	-0.071841	-3.3821E-05	-1.6721	-0.00078715	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.58668	1	4411	4411		47.657	1.6851	1	1490800	+		12962	22688	8921	8929	14841	14841					0.05283125223149909
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76885986328125	2	470.769783	939.525013	-1.5754	-0.00074164	0.39518	0.00018604	-1.1802	-0.0005556	470.7698262584641	54.969	1.6886	54.969	54.144	55.833	0					124	54	3	0	0	0	0.6204	1	4585	4585		45.972	3.108	1	1398900	+		12963	22688	8921	8929	14842	14842					0.05283125223149909
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7691955566406	2	470.769783	939.525013	-0.63239	-0.00029771	-1.0756	-0.00050635	-1.708	-0.00080406	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.44421	1	4756	4756		54.776	3.5836	1	1468500	+		12964	22688	8921	8929	14843	14843					0.05283125223149909
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.768798828125	2	470.769783	939.525013	-1.0178	-0.00047915	-1.0022	-0.0004718	-2.02	-0.00095095	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.36616	3	4311	4266;4274;4311		60.118	6.8607	1	1648400	+		12965	22688	8921	8929	14844;14845;14846	14846					0.05283125223149909
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.76904296875	2	470.769783	939.525013	0.34379	0.00016185	-2.4863	-0.0011705	-2.1425	-0.0010086	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.44421	1	4288	4288		54.776	5.2403	1	1863100	+		12966	22688	8921	8929	14847	14847					0.05283125223149909
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7685852050781	2	470.769783	939.525013	-0.63024	-0.0002967	-1.6901	-0.00079565	-2.3203	-0.0010924	470.76900608470595	48.857	1.2932	49.317	48.985	50.278	0.45983					73	31	4	0	0	0	0.6204	1	4727	4727		45.972	1.8554	1	21584000	+		12967	22688	8921	8929	14848	14848					0.05283125223149909
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7691345214844	2	470.769783	939.525013	-0.0079822	-3.7578E-06	-1.8362	-0.00086443	-1.8442	-0.00086819	470.7688392361173	51.36	0.75376	51.795	51.534	52.288	0.43505					46	17	4	0	0	0	0.44421	1	5105	5105		54.776	5.2403	1	3116800	+		12968	22688	8921	8929	14849	14849					0.05283125223149909
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76910400390625	2	470.769783	939.525013	-0.26642	-0.00012542	-1.5501	-0.00072973	-1.8165	-0.00085516	470.76897416042203	52.548	1.7695	52.972	52.234	54.003	0.42348					108	42	4	0	0	0	0.30689	4	5272	5272;5284;5296;5309		64.207	10.856	1	18288000	+		12969	22688	8921	8929	14850;14851;14852;14853	14850					0.05283125223149909
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7687683105469	2	470.769783	939.525013	-0.48992	-0.00023064	-1.8607	-0.00087595	-2.3506	-0.0011066	470.7688881667738	48.682	1.1232	49.586	49.29	50.413	0.90424					66	27	4	0	0	0	0.41566	2	4706	4706;4717		56.721	10.749	1	20692000	+		12970	22688	8921	8929	14854;14855	14854					0.05283125223149909
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.76898193359375	2	470.769783	939.525013	0.24256	0.00011419	-1.7466	-0.00082224	-1.504	-0.00070805	470.7687464868604	50.117	1.1073	50.962	50.641	51.748	0.84501					94	26	5	0	0	0	0.44421	1	4919	4919		54.776	5.2403	1	10800000	+		12971	22688	8921	8929	14856	14856					0.05283125223149909
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.768798828125	2	470.769783	939.525013	-0.45506	-0.00021423	-1.2089	-0.00056911	-1.664	-0.00078334	470.7691067247387	52.317	1.9749	52.984	52.189	54.164	0.6673					112	47	4	0	0	0	0.33718	2	5286	5274;5286		62.107	12.571	1	18701000	+		12972	22688	8921	8929	14857;14858	14858					0.05283125223149909
GRREVGLPG	9	Unmodified	_GRREVGLPG_					0	0	0			REV__nc|ENSG00000184507|Q86Y26|NUTM1	REV__nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.76971435546875	2	470.769783	939.525013	-0.58113	-0.00027358	-0.70229	-0.00033062	-1.2834	-0.00060419	470.76930204103803	81.63	1.1182	82.13	81.661	82.779	0.49967					51	27	2	0	0	0	0.55097	1	9445	9445		49.442	1.7842	1	1330700	+		12973	22688	8921	8929	14859	14859					0.05283125223149909
GRRGGRRWER	10	Unmodified	_GRRGGRRWER_					0	0	0		chr9:98005153-98015364|23|214.04|0.68|8.3|+|1|ANP32B,ANP32B|2	chr9:98005153-98015364|23|214.04|0.68|8.3|+|1|ANP32B,ANP32B|2	chr9:98005153-98015364|23|214.04|0.68|8.3|+|1|ANP32B,ANP32B|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.3631591796875	2	643.358485	1284.70242	0.60473	0.00038906	4.4001	0.0028308	5.0048	0.0032199	643.3619905540291	63.327	1.3312	63.45	62.568	63.899	0.12252					81	59	2	0	0	0	0.86763	1	5575	5575		26.693	1.1189	1	423170			12974	534	8922	8930	14860	14860					0.07145393545806655
GRRGLNLPR	9	Unmodified	_GRRGLNLPR_					0	0	0		ENST00000564629.1_1_16:31470274-31471003:-|nuORF	ENST00000564629.1_1_16:31470274-31471003:-|nuORF	ENST00000564629.1_1_16:31470274-31471003:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8182373046875	2	519.817599	1037.62064	0.62872	0.00032682	0.67176	0.00034919	1.3005	0.00067602	519.8178355105972	96.042	1.6829	96.446	95.572	97.255	0.40451					106	40	3	0	0	0	0.74721	1	11523	11523		37.159	5.2042	1	1896000			12975	13889	8923	8931	14861	14861					0.10333898134012998
GRRGLRAPPL	10	Unmodified	_GRRGLRAPPL_					0	0	0		ENST00000526007.5_1_8:145051654-145057989:-|nuORF;ENSG00000178685|ENST00000313028|PARP10	ENST00000526007.5_1_8:145051654-145057989:-|nuORF	ENST00000526007.5_1_8:145051654-145057989:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.840087890625	2	546.841074	1091.66759	1.265	0.00069175	-3.5971	-0.001967	-2.3321	-0.0012753	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.71042	4	10852	10852;10888;10948;11007		44.117	1.9584	1	39577000			12976	7217	8924	8932	14862;14863;14864;14865	14862					0.12542757685150718
GRRGLRAPPL	10	Unmodified	_GRRGLRAPPL_					0	0	0		ENST00000526007.5_1_8:145051654-145057989:-|nuORF;ENSG00000178685|ENST00000313028|PARP10	ENST00000526007.5_1_8:145051654-145057989:-|nuORF	ENST00000526007.5_1_8:145051654-145057989:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.8399658203125	2	546.841074	1091.66759	0.19665	0.00010754	-2.8678	-0.0015682	-2.6712	-0.0014607	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.84112	3	10513	10513;10809;10832		37.159	10.363	1	55511000			12977	7217	8924	8932	14866;14867;14868	14866					0.12542757685150718
GRRGLRAPPL	10	Unmodified	_GRRGLRAPPL_					0	0	0		ENST00000526007.5_1_8:145051654-145057989:-|nuORF;ENSG00000178685|ENST00000313028|PARP10	ENST00000526007.5_1_8:145051654-145057989:-|nuORF	ENST00000526007.5_1_8:145051654-145057989:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8401489257812	2	546.841074	1091.66759	0.84844	0.00046396	-3.1925	-0.0017458	-2.3441	-0.0012818	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.84112	2	10531	10531;10801		37.159	2.5999	1	43597000			12978	7217	8924	8932	14869;14870	14869					0.12542757685150718
GRRGPGLV	8	Unmodified	_GRRGPGLV_					0	0	0			REV__ENST00000470890.1_1_1:27683440-27683647:-|nuORF	REV__ENST00000470890.1_1_1:27683440-27683647:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2492370605469	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.77	1	114.74	114.24	115.24	-0.024452								0	0	0	0.30125	1	12720	12720		20.482	0	1		+		12979	27222	8925	8933	14871	14871					0.06959774885558545
GRRGPKKRRN	10	Unmodified	_GRRGPKKRRN_					0	0	0		ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	612.879638671875	2	612.879053	1223.74355	-0.12345	-7.5661E-05	1.4227	0.00087195	1.2993	0.00079629	612.8794735432923	104.89	2.8735	104.89	104.24	107.11	0					239	67	7	0	0	0	0.5766	8	10820	10784;10796;10820;10844;10856;10868;10880;10905		51.335	13.823	1	38592000			12980	13724	8926	8934	14872;14873;14874;14875;14876;14877;14878;14879	14874					0.140631545853239
GRRGPKKRRN	10	Unmodified	_GRRGPKKRRN_					0	0	0		ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.8795776367188	2	612.879053	1223.74355	-0.38675	-0.00023703	1.2128	0.00074329	0.82603	0.00050626	612.8795891868975	104.75	3.6593	104.74	104.15	107.81	-0.014809					295	86	6	0	0	0	0.43769	14	11289	11277;11289;11313;11325;11337;11349;11361;11385;11397;11410;11422;11446;11459;11471		60.972	25.354	1	46932000			12981	13724	8926	8934	14880;14881;14882;14883;14884;14885;14886;14887;14888;14889;14890;14891;14892;14893	14881					0.140631545853239
GRRGPKKRRN	10	Unmodified	_GRRGPKKRRN_					0	0	0		ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.8792114257812	2	612.879053	1223.74355	3.0905	0.0018941	-2.2909	-0.001404	0.79959	0.00049005	612.8774407741583	104.71	3.9916	104.67	103.85	107.84	-0.04039					302	94	6	0	0	0	0.5766	12	11504	11492;11504;11540;11552;11564;11588;11600;11613;11627;11639;11651;11675		51.335	19.806	1	48609000			12982	13724	8926	8934	14894;14895;14896;14897;14898;14899;14900;14901;14902;14903;14904;14905	14895					0.140631545853239
GRRGPKKRRN	10	Unmodified	_GRRGPKKRRN_					0	0	0		ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.8790893554688	2	612.879053	1223.74355	0.28933	0.00017733	0.57076	0.0003498	0.86009	0.00052713	612.8792234651027	104.57	3.8669	104.61	104	107.87	0.039864					305	91	6	0	0	0	0.43769	12	11399	11351;11387;11399;11423;11435;11447;11471;11484;11496;11509;11533;11557		60.972	23.453	1	50996000			12983	13724	8926	8934	14906;14907;14908;14909;14910;14911;14912;14913;14914;14915;14916;14917	14908					0.140631545853239
GRRGPKKRRN	10	Unmodified	_GRRGPKKRRN_					0	0	0		ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.8794555664062	2	612.879053	1223.74355	1.1743	0.00071971	-0.36763	-0.00022531	0.80668	0.00049439	612.878611922605	104.31	3.5817	104.48	103.81	107.39	0.17096					311	89	7	0	0	0	0.5766	10	11088	11040;11088;11100;11124;11136;11148;11160;11172;11197;11221		51.335	24.643	1	83708000			12984	13724	8926	8934	14918;14919;14920;14921;14922;14923;14924;14925;14926;14927	14919					0.140631545853239
GRRGPKKRRN	10	Unmodified	_GRRGPKKRRN_					0	0	0		ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8790893554688	2	612.879053	1223.74355	0.91302	0.00055957	-0.209	-0.00012809	0.70402	0.00043148	612.8787003590065	104.47	3.5452	104.58	103.94	107.49	0.11684					293	87	6	0	0	0	0.46422	10	11116	11116;11128;11140;11152;11164;11176;11189;11215;11227;11239		58.782	25.97	1	81912000			12985	13724	8926	8934	14928;14929;14930;14931;14932;14933;14934;14935;14936;14937	14928					0.140631545853239
GRRGPKKRRN	10	Unmodified	_GRRGPKKRRN_					0	0	0		ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.8795166015625	2	612.879053	1223.74355	-1.2473	-0.00076447	1.9935	0.0012218	0.74617	0.00045731	612.8800479877376	104.48	2.784	104.57	103.95	106.73	0.093857					273	68	6	0	0	0	0.344	11	11073	11025;11061;11073;11085;11097;11109;11121;11133;11145;11157;11169		68.787	28.009	1	81450000			12986	13724	8926	8934	14938;14939;14940;14941;14942;14943;14944;14945;14946;14947;14948	14940					0.140631545853239
GRRGRPPALL	10	Unmodified	_GRRGRPPALL_					0	0	0		ENSG00000253368|ENST00000522111|TRNP1	ENSG00000253368|ENST00000522111|TRNP1	ENSG00000253368|ENST00000522111|TRNP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8410034179688	2	546.841074	1091.66759	-0.41161	-0.00022509	-2.2056	-0.0012061	-2.6172	-0.0014312	546.8400747085221	101.16	3.89	101.19	100.52	104.41	0.031036					283	93	6	0	0	0	0.85939	1	10983	10983		23.042	1.0826	1	40007000			12987	8858	8927	8935	14949	14949					0.12542757685150718
GRRGRVLSL	9	Unmodified	_GRRGRVLSL_					0	0	0			REV__ENSG00000167978|ENST00000301740|SRRM2	REV__ENSG00000167978|ENST00000301740|SRRM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.75286865234375	2	507.319974	1012.6254	0.82673	0.00041942	0.34913	0.00017712	1.1759	0.00059654	507.32003263115564	62.157	0.60716	62.712	62.516	63.123	0.55449					22	13	2	0	0	0	0.20789	1	6692	6692		32.812	3.6629	1	335750	+		12988	21443	8928	8936	14950	14950					0.11958782276781221
GRRITRPRTR	10	Unmodified	_GRRITRPRTR_					0	0	0		ENST00000392894.7_1_3:149530688-149531075:+|nuORF;ENST00000470151.5_2_3:149530688-149570304:+|nuORF	ENST00000392894.7_1_3:149530688-149531075:+|nuORF	ENST00000392894.7_1_3:149530688-149531075:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8927612304688	2	634.892161	1267.76977	-1.1756	-0.00074638	1.5288	0.00097063	0.3532	0.00022424	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.67571	1	11163	11163		45.972	1.5951	1	66671000			12989	11036	8929	8937	14951	14951					0.14659423756779688
GRRKALAT	8	Unmodified	_GRRKALAT_					0	0	0		ENSG00000115504|ENST00000431489|EHBP1;nc|ENSG00000115504|Q8NDI1-2|EHBP1;nc|ENSG00000115504|Q8NDI1|EHBP1;ENST00000494958.1_1_2:62934317-63053404:+|nuORF;ENSG00000183310|ENST00000328782|OR2T34	ENSG00000115504|ENST00000431489|EHBP1	ENSG00000115504|ENST00000431489|EHBP1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7742919921875	2	436.774868	871.535184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.333	1	27.333	26.833	27.833	0								0	0	0	0.30252	1	1089	1089		19.36	0	1				12990	2850	8930	8938	14952	14952					0.0942773294835888
GRRLHRRRRCR	11	Unmodified	_GRRLHRRRRCR_					0	0	0		ENST00000487959.5_1_2:148602122-148602257:+|nuORF	ENST00000487959.5_1_2:148602122-148602257:+|nuORF	ENST00000487959.5_1_2:148602122-148602257:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.9686279296875	3	507.971265	1520.89197	-1.8784	-0.00095415	-1.5183	-0.00077126	-3.3967	-0.0017254	507.97041059348106	16.709	0.31564	16.709	16.597	16.912	0					30	13	3	0	0	0	0.79224	1	146	146		12.957	3.7457	1	128930			12991	12615	8931	8939	14953	14953					0.1523556228733014
GRRLPKEPTVL	11	Unmodified	_GRRLPKEPTVL_					0	0	0			REV__nc|ENSG00000134222|Q6PGN9-3|PSRC1	REV__nc|ENSG00000134222|Q6PGN9-3|PSRC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.385986328125	2	633.388054	1264.76155	-0.18394	-0.0001165	-4.2182	-0.0026717	-4.4021	-0.0027882	633.3853758780649	57.013	1.0689	57.046	56.666	57.735	0.033184					61	35	2	0	0	0	0.74771	1	5204	5204		13.454	0	1	142320	+		12992	29856	8932	8940	14954	14954					0.13976431996775318
GRRLRGFGGG	10	Unmodified	_GRRLRGFGGG_					0	0	0		ENST00000322652.9_1_17:30264237-30264510:+|nuORF	ENST00000322652.9_1_17:30264237-30264510:+|nuORF	ENST00000322652.9_1_17:30264237-30264510:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7939453125	2	516.794124	1031.57369	0.70992	0.00036688	-2.0068	-0.0010371	-1.2969	-0.00067023	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.85694	1	8794	8794		21.96	0	1	842420			12993	10048	8933	8941	14955	14955					0.05917038582902023
GRRMAVEREL	10	Unmodified	_GRRMAVEREL_					0	0	0		nc|ENSG00000113593|Q96BP3-2|PPWD1;ENSG00000113593|ENST00000261308|PPWD1	nc|ENSG00000113593|Q96BP3-2|PPWD1	nc|ENSG00000113593|Q96BP3-2|PPWD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.83740234375	2	608.832588	1215.65062	5.7403	0.0034949	2.2924	0.0013957	8.0327	0.0048906	608.8338988848703	110.04	0.64108	110.11	109.94	110.58	0.067993					56	22	4	0	0	0	0.86698	1	13351	13351		28.081	2.5074	1	3727200			12994	2731	8934	8942	14956	14956					0.05142469017073381
GRRNKAAGAD	10	Unmodified	_GRRNKAAGAD_					0	0	0		nc|ENSG00000167716|Q562E7-4|WDR81;ENSG00000167716|ENST00000409644|WDR81	nc|ENSG00000167716|Q562E7-4|WDR81	nc|ENSG00000167716|Q562E7-4|WDR81	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.2821960449219	2	508.273221	1014.53189	0.35895	0.00018244	1.1978	0.00060882	1.5568	0.00079127	508.273945150655	54.466	0.4207	55.051	54.79	55.211	0.58474					15	9	2	0	0	0	0.37624	1	5535	5535		24.519	8.046	1	233150			12995	6321	8935	8943	14957	14957					0.02520438103692868
GRRPGHCSTV	10	Carbamidomethyl (C)	_GRRPGHC(Carbamidomethyl (C))STV_	GRRPGHC(1)STV		GRRPGHC(51)STV		0	1	0			REV__ENST00000265465.7_1_11:65029616-65029667:+|nuORF	REV__ENST00000265465.7_1_11:65029616-65029667:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.7785034179688	2	563.780356	1125.54616	-0.59695	-0.00033655	-2.4798	-0.0013981	-3.0768	-0.0017346	563.7782390832367	25.376	0.53678	25.427	25.113	25.649	0.050453					34	21	2	0	0	0	0.5766	1	999	999		51.335	8.9393	1	65081	+		12996	24492	8936	8944	14958	14958	298				-0.011592327396556357
GRRPGLVSA	9	Unmodified	_GRRPGLVSA_					0	0	0		ENSG00000188095|ENST00000341735|MESP2	ENSG00000188095|ENST00000341735|MESP2	ENSG00000188095|ENST00000341735|MESP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.77227783203125	2	456.772326	911.530098	-1.1567	-0.00052834	1.2544	0.00057299	0.097763	4.4655E-05	456.7726883987969	89.791	2.1769	90.003	88.879	91.056	0.21271					109	51	4	0	0	0	0.74721	1	8965	8965		37.159	0	1	1072500			12997	7904	8937	8945	14959	14959					0.07079429085752054
GRRPGLVSA	9	Unmodified	_GRRPGLVSA_					0	0	0		ENSG00000188095|ENST00000341735|MESP2	ENSG00000188095|ENST00000341735|MESP2	ENSG00000188095|ENST00000341735|MESP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.77252197265625	2	456.772326	911.530098	0.66367	0.00030315	-0.37052	-0.00016924	0.29315	0.0001339	456.77188114676403	89.921	1.592	90.073	89.44	91.032	0.1519					92	37	4	0	0	0	0.78983	1	9017	9017		27.882	1.0861	1	1022900			12998	7904	8937	8945	14960	14960					0.07079429085752054
GRRPLLGPHP	10	Unmodified	_GRRPLLGPHP_					0	0	0			REV__ENST00000308724.9_1_14:24035815-24036431:-|nuORF	REV__ENST00000308724.9_1_14:24035815-24036431:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.327880859375	2	550.327799	1098.64105	-0.59914	-0.00032972	-0.43767	-0.00024086	-1.0368	-0.00057058	550.3275633204873	100.31	1.098	100.35	99.837	100.93	0.041107					67	24	4	0	0	0	0.86482	1	10673	10673		25.45	2.4077	1	446840	+		12999	24865	8938	8946	14961	14961					0.0956706879385365
GRRPLSSLP	9	Unmodified	_GRRPLSSLP_					0	0	0		ENST00000489243.5_1_9:6758133-6893415:+|nuORF	ENST00000489243.5_1_9:6758133-6893415:+|nuORF	ENST00000489243.5_1_9:6758133-6893415:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7955322265625	2	491.793258	981.571963	0.42504	0.00020903	4.4189	0.0021732	4.8439	0.0023822	491.7954861357076	59.345	2.1315	59.459	58.989	61.12	0.11396					113	74	3	0	0	0	0.66686	1	5175	5175		42.864	0.38981	1	139720			13000	12648	8939	8947	14962	14962					0.08043984774269575
GRRPPPPV	8	Unmodified	_GRRPPPPV_					0	0	0			REV__ENST00000492189.5_1_14:104029639-104053625:+|nuORF	REV__ENST00000492189.5_1_14:104029639-104053625:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2631530761719	2	438.264136	874.51372	-0.25936	-0.00011367	-1.4504	-0.00063564	-1.7097	-0.00074931	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.87276	1	2774	2774		29.842	3.0454	1	2361100	+		13001	27669	8940	8948	14963	14963					0.07144347919643224
GRRPPPPV	8	Unmodified	_GRRPPPPV_					0	0	0			REV__ENST00000492189.5_1_14:104029639-104053625:+|nuORF	REV__ENST00000492189.5_1_14:104029639-104053625:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26361083984375	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.86288	1	2982	2982		26.796	5.0938	1	22924000	+		13002	27669	8940	8948	14964	14964					0.07144347919643224
GRRPSAGV	8	Unmodified	_GRRPSAGV_					0	0	0			REV__ENST00000395346.6_1_17:26897892-26898289:-|nuORF	REV__ENST00000395346.6_1_17:26897892-26898289:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2284240722656	2	400.230294	798.446034	-0.7523	-0.00030109	-3.6803	-0.001473	-4.4326	-0.0017741	400.2288641883786	54.868	1.9417	54.819	53.946	55.888	-0.049274					98	61	2	0	0	0	0.85277	1	4551	4551		25.45	0	1	1019300	+		13003	26106	8941	8949	14965	14965					0.038748979888509893
GRRRAHTTSQL	11	Unmodified	_GRRRAHTTSQL_					0	0	0		ENST00000609111.1_1_10:88727834-88728308:-|nuORF	ENST00000609111.1_1_10:88727834-88728308:-|nuORF	ENST00000609111.1_1_10:88727834-88728308:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8604736328125	2	641.857983	1281.70141	-0.052066	-3.3419E-05	1.5368	0.00098644	1.4848	0.00095302	641.8586484820704	118.5	0.48003	118.42	118.21	118.69	-0.07531					44	17	3	0	0	0	0.66929	2	12734	12734;12745		36.447	2.1227	1	700550			13004	14483	8942	8950	14966;14967	14966					0.071831343862641
GRRRAHTTSQL	11	Unmodified	_GRRRAHTTSQL_					0	0	0		ENST00000609111.1_1_10:88727834-88728308:-|nuORF	ENST00000609111.1_1_10:88727834-88728308:-|nuORF	ENST00000609111.1_1_10:88727834-88728308:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8605346679688	2	641.857983	1281.70141	1.7061	0.001095	0.85773	0.00055054	2.5638	0.0016456	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.45992	2	12883	12883;13134		54.722	11.858	1	27133000			13005	14483	8942	8950	14968;14969	14968					0.071831343862641
GRRRAHTTSQL	11	Unmodified	_GRRRAHTTSQL_					0	0	0		ENST00000609111.1_1_10:88727834-88728308:-|nuORF	ENST00000609111.1_1_10:88727834-88728308:-|nuORF	ENST00000609111.1_1_10:88727834-88728308:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.862548828125	2	641.857983	1281.70141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.33	1	119.35	118.85	119.85	0.026466								0	0	0	0.56276	1	13132	13132		28.081	0.19925	1				13006	14483	8942	8950	14970	14970					0.071831343862641
GRRRGLIGF	9	Unmodified	_GRRRGLIGF_					0	0	0		ENST00000585629.1_1_18:58330357-58331131:+|nuORF	ENST00000585629.1_1_18:58330357-58331131:+|nuORF	ENST00000585629.1_1_18:58330357-58331131:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3174438476562	2	516.314692	1030.61483	0.66914	0.00034549	1.5985	0.00082534	2.2677	0.0011708	516.3153400716644	84.185	0.72745	84.333	83.962	84.69	0.14793					37	16	3	0	0	0	0.72402	1	8172	8172		38.806	2.3594	1	242850			13007	14151	8943	8951	14971	14971					0.10074799622361752
GRRRRKRLGS	10	Unmodified	_GRRRRKRLGS_					0	0	0			REV__ENST00000480582.1_1_7:150555040-150557681:+|nuORF	REV__ENST00000480582.1_1_7:150555040-150557681:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.392578125	2	621.392328	1240.7701	-0.28789	-0.0001789	0.88435	0.00054953	0.59645	0.00037063	621.392781910036	104.72	2.6015	104.71	104.23	106.84	-0.014809					230	61	5	0	0	0	0.8651	1	11302	11302		25.574	1.0549	1	11881000	+		13008	27421	8944	8952	14972	14972					0.15934843476634342
GRRRRRPR	8	Unmodified	_GRRRRRPR_					0	0	0		ENST00000562171.1_1_16:68119636-68160404:+|nuORF;ENST00000346183.7_1_16:68119591-68155934:+|nuORF;ENST00000568466.6_1_16:68119591-68208307:+|nuORF;ENST00000539828.6_1_16:68119591-68225707:+|nuORF	ENST00000562171.1_1_16:68119636-68160404:+|nuORF	ENST00000562171.1_1_16:68119636-68160404:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3536376953125	2	555.353006	1108.69146	0.32258	0.00017915	0.046734	2.5954E-05	0.36931	0.0002051	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.86288	1	10510	10510		26.796	0	1	7708500			13009	10308	8945	8953	14973	14973					0.14146035962198766
GRRSPVGGGGP	11	Unmodified	_GRRSPVGGGGP_					0	0	0		ENSG00000179562|ENST00000321407|GCC1	ENSG00000179562|ENST00000321407|GCC1	ENSG00000179562|ENST00000321407|GCC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.7711486816406	2	498.770314	995.526075	-0.3603	-0.00017971	1.9226	0.00095892	1.5623	0.00077921	498.77106434536984	107.59	0.67616	107.62	107.15	107.82	0.035622					41	15	4	0	0	0	0.69995	1	11835	11835		31.53	1.0262	1	861590			13010	7278	8946	8954	14974	14974					0.02813339592057673
GRRSSRKILGA	11	Unmodified	_GRRSSRKILGA_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|59|2|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|59|2|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|59|2|sense	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.91558837890625	3	400.914305	1199.72109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.7	1	117.63	117.13	118.13	-0.07531								0	0	0	0.56276	1	12631	12631		18.531	0.26896	1				13011	14693	8947	8955	14975	14975					0.12921510397040947
GRRTILMFL	9	Unmodified	_GRRTILMFL_					0	0	0			REV__ENST00000372396.3_1_1:44157203-44157976:+|nuORF	REV__ENST00000372396.3_1_1:44157203-44157976:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8300170898438	2	553.828786	1105.64302	-1.4375	-0.00079614	3.6733	0.0020344	2.2358	0.0012382	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.74721	1	8659	8659		37.159	1.5408	1	1728300	+		13012	25715	8948	8956	14976	14976					0.09442361487435846
GRRTRLLGKP	10	Unmodified	_GRRTRLLGKP_					0	0	0		ENST00000479644.1_1_6:31939773-31940810:+|nuORF	ENST00000479644.1_1_6:31939773-31940810:+|nuORF	ENST00000479644.1_1_6:31939773-31940810:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	577.3663330078125	2	577.367456	1152.72036	0.74115	0.00042792	-2.508	-0.0014481	-1.7669	-0.0010201	577.3658570064985	102.18	2.9839	102.23	101.81	104.79	0.043198					214	72	5	0	0	0	0.8651	1	11014	11014		25.574	1.3713	1	10154000			13013	12412	8949	8957	14977	14977					0.1501071574798516
GRRVKEKHL	9	Unmodified	_GRRVKEKHL_					0	0	0			REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.8457641601562	2	561.846356	1121.67816	-0.47673	-0.00026785	-0.54208	-0.00030457	-1.0188	-0.00057241	561.8459227560618	97.238	1.868	97.238	96.81	98.678	0					92	44	4	0	0	0	0.71772	1	9750	9750		39.253	8.9351	1	643900	+		13014	28095	8950	8958	14978	14978					0.12218740339585565
GRRVKEKHL	9	Unmodified	_GRRVKEKHL_					0	0	0			REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	561.8460693359375	2	561.846356	1121.67816	2.4941	0.0014013	-3.582	-0.0020125	-1.0879	-0.00061123	561.8441612955584	96.954	2.2732	96.898	96.37	98.643	-0.056381					143	52	5	0	0	0	0.69624	3	10403	10381;10391;10403		40.778	6.6056	1	1709600	+		13015	28095	8950	8958	14979;14980;14981	14981					0.12218740339585565
GRRVKEKHL	9	Unmodified	_GRRVKEKHL_					0	0	0			REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.8458862304688	2	561.846356	1121.67816	1.4106	0.00079252	-2.5998	-0.0014607	-1.1893	-0.00066819	561.8447337891968	96.819	2.411	96.866	96.355	98.766	0.047798					140	55	5	0	0	0	0.55097	1	10260	10260		49.442	20.292	1	1810100	+		13016	28095	8950	8958	14982	14982					0.12218740339585565
GRRVKEKHL	9	Unmodified	_GRRVKEKHL_					0	0	0			REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	561.8458862304688	2	561.846356	1121.67816	0.82777	0.00046508	-1.9853	-0.0011154	-1.1576	-0.00065037	561.8450907704936	96.8	1.7474	96.963	96.403	98.15	0.16317					98	40	4	0	0	0	0.78983	1	9964	9964		27.882	0	1	906900	+		13017	28095	8950	8958	14983	14983					0.12218740339585565
GRRVKEKHL	9	Unmodified	_GRRVKEKHL_					0	0	0			REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	561.8453979492188	2	561.846356	1121.67816	-1.4136	-0.0007942	0.29387	0.00016511	-1.1197	-0.00062909	561.8463779100821	96.764	2.3842	96.966	96.53	98.914	0.20207					113	54	4	0	0	0	0.77244	2	9900	9900;9923		32.812	8.2932	1	806770	+		13018	28095	8950	8958	14984;14985	14984					0.12218740339585565
GRRVKEKHL	9	Unmodified	_GRRVKEKHL_					0	0	0			REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.8462524414062	2	561.846356	1121.67816	1.9082	0.0010721	-2.8673	-0.001611	-0.95915	-0.00053889	561.8445473616424	96.586	1.6942	96.991	96.505	98.199	0.40498					103	40	4	0	0	0	0.78983	1	11598	11598		27.882	4.8398	1	1276200	+		13019	28095	8950	8958	14986	14986					0.12218740339585565
GRRVKEKHL	9	Unmodified	_GRRVKEKHL_					0	0	0			REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	561.846356	1121.67816	2.4941	0.0014013	-3.582	-0.0020125	-1.0879	-0.00061123	561.8441612955584	96.954	2.2732	96.898	96.37	98.643	-0.056381	-0.11118	-0.0022924	NaN	49.442	143	52	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1709600	+		13020	28095	8950	8958							0.12218740339585565
GRRWGQARPD	10	Unmodified	_GRRWGQARPD_					0	0	0		ENST00000573951.1_1_16:3313772-3314576:+|nuORF	ENST00000573951.1_1_16:3313772-3314576:+|nuORF	ENST00000573951.1_1_16:3313772-3314576:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2113342285156	3	400.211122	1197.61154	0.24894	9.963E-05	-0.043151	-1.7269E-05	0.20579	8.2361E-05	400.21103835206276	22.75	0.72043	22.139	21.71	22.43	-0.6107					42	17	3	0	0	0	0.86446	1	972	972		30.569	1.0181	1	157820			13021	14027	8951	8959	14987	14987					0.020635047776977444
GRRYKRRR	8	Unmodified	_GRRYKRRR_					0	0	0		nc|ENSG00000197381|P78563-5|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3568115234375	2	574.355214	1146.69588	1.1072	0.0006359	0.05724	3.2876E-05	1.1644	0.00066877	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.87922	1	10691	10691		31.955	2.8053	1	708140			13022	15191	8952	8960	14988	14988					0.12839500385121028
GRRYKRRR	8	Unmodified	_GRRYKRRR_					0	0	0		nc|ENSG00000197381|P78563-5|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.35693359375	2	574.355214	1146.69588	-1.3728	-0.00078849	2.5791	0.0014813	1.2062	0.0006928	574.3566305310679	99.909	3.0439	100.08	98.131	101.18	0.17199					143	70	3	0	0	0	0.86288	1	10357	10357		26.796	2.2769	1	243780			13023	15191	8952	8960	14989	14989					0.12839500385121028
GRSERVKV	8	Unmodified	_GRSERVKV_					0	0	0			REV__ENST00000360089.8_1_1:158065157-158065664:+|nuORF	REV__ENST00000360089.8_1_1:158065157-158065664:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7773742675781	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.626	1	79.757	79.257	80.257	0.13086								0	0	0	0.29596	1	7558	7558		35.618	1.4457	1		+		13024	25469	8953	8961	14990	14990					0.07307411740180214
GRSGLINPN	9	Unmodified	_GRSGLINPN_					0	0	0			REV__ENST00000492362.1_1_10:94240585-94257457:-|nuORF	REV__ENST00000492362.1_1_10:94240585-94257457:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.25396728515625	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.67345	1	7979	7979		42.396	8.2236	1	1324500	+		13025	27380	8954	8962	14991	14991					0.027191324691784757
GRSGPPRV	8	Unmodified	_GRSGPPRV_					0	0	0		ENST00000232854.8_1_3:50606657-50608415:+|nuORF	ENST00000232854.8_1_3:50606657-50608415:+|nuORF	ENST00000232854.8_1_3:50606657-50608415:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2371826171875	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.8347	1	7364	7364		23.042	1.0826	1	2127000			13026	9220	8955	8963	14992	14992					0.04243184505889985
GRSIEQLEK	9	Unmodified	_GRSIEQLEK_					0	0	0			REV__ENST00000594305.1_1_19:49467651-49468248:+|nuORF	REV__ENST00000594305.1_1_19:49467651-49468248:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2938842773438	2	530.293288	1058.57202	1.6334	0.0008662	-1.7145	-0.0009092	-0.081076	-4.2994E-05	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.69624	1	10699	10699		40.778	1.5253	1	1816400	+		13027	29236	8956	8964	14993	14993					0.04507939983614051
GRSIFVLIAS	10	Unmodified	_GRSIFVLIAS_					0	0	0			REV__ENST00000609118.1_1_1:111505930-111506428:+|nuORF	REV__ENST00000609118.1_1_1:111505930-111506428:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.8545	1	8890	8890		36.447	13.404	1	4208000	+		13028	29406	8957	8965	14994	14994					0.09498308748311501
GRSKVRDI	8	Unmodified	_GRSKVRDI_					0	0	0			REV__ENSG00000155252|ENST00000370631|PI4K2A	REV__ENSG00000155252|ENST00000370631|PI4K2A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77734375	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.289	1	79.42	78.92	79.92	0.13086								0	0	0	0.29823	1	7513	7513		23.523	4.4192	1		+		13029	20417	8958	8966	14995	14995					0.07307411740168845
GRSKVRDI	8	Unmodified	_GRSKVRDI_					0	0	0			REV__ENSG00000155252|ENST00000370631|PI4K2A	REV__ENSG00000155252|ENST00000370631|PI4K2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77777099609375	2	465.777608	929.540663	0.5788	0.00026959	-0.59714	-0.00027814	-0.018347	-8.5455E-06	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.82658	2	7544	7544;7592		44.377	3.8046	1	344270	+		13030	20417	8958	8966	14996;14997	14996					0.07307411740168845
GRSPGVPR	8	Unmodified	_GRSPGVPR_					0	0	0			REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.23785400390625	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.89043	1	7664	7664		35.618	0	1	1747900	+		13031	27532	8959	8967	14998	14998					0.04243184505889985
GRSPGVPR	8	Unmodified	_GRSPGVPR_					0	0	0			REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2379455566406	2	413.238119	824.461684	-0.12335	-5.0972E-05	0.56146	0.00023202	0.43812	0.00018105	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.88185	4	7854	7404;7784;7854;7877		40.778	6.6056	1	1978800	+		13032	27532	8959	8967	14999;15000;15001;15002	15001					0.04243184505889985
GRSPGVPR	8	Unmodified	_GRSPGVPR_					0	0	0			REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.23809814453125	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.89043	1	7591	7591		35.618	6.4687	1	2127000	+		13033	27532	8959	8967	15003	15003					0.04243184505889985
GRSPGVPR	8	Unmodified	_GRSPGVPR_					0	0	0			REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2375793457031	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.87479	2	6929	6929;7131		32.812	7.3622	1	2012200	+		13034	27532	8959	8967	15004;15005	15004					0.04243184505889985
GRSPGVPR	8	Unmodified	_GRSPGVPR_					0	0	0			REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2366943359375	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.84341	1	7026	7026		24.203	1.1603	1	1692300	+		13035	27532	8959	8967	15006	15006					0.04243184505889985
GRSPGVPR	8	Unmodified	_GRSPGVPR_					0	0	0			REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2376708984375	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.8621	3	7423	7354;7381;7423		32.812	2.6214	1	1341700	+		13036	27532	8959	8967	15007;15008;15009	15009					0.04243184505889985
GRSPGVPR	8	Unmodified	_GRSPGVPR_					0	0	0			REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	REV__ENST00000485811.5_1_1:44457505-44457763:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2382507324219	2	413.238119	824.461684	-0.091267	-3.7715E-05	0.27761	0.00011472	0.18635	7.7005E-05	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.86677	1	8783	8783		27.882	3.6795	1	1247200	+		13037	27532	8959	8967	15010	15010					0.04243184505889985
GRSPSQRI	8	Unmodified	_GRSPSQRI_					0	0	0			REV__nc|ENSG00000211933|A0A0B4J1U7|IGHV6-1	REV__nc|ENSG00000211933|A0A0B4J1U7|IGHV6-1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7535095214844	2	450.754133	899.493713	-1.264	-0.00056978	1.3912	0.00062708	0.12712	5.7301E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.89962	1	7552	7552		38.806	1.647	1	414240	+		13038	30195	8960	8968	15011	15011					0.03994552189033129
GRSPTVPR	8	Unmodified	_GRSPTVPR_					0	0	0		ENST00000509375.5_1_4:81105174-81118128:+|nuORF	ENST00000509375.5_1_4:81105174-81118128:+|nuORF	ENST00000509375.5_1_4:81105174-81118128:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25177001953125	2	435.251226	868.487899	-0.16621	-7.2343E-05	0.40306	0.00017543	0.23685	0.00010309	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.91472	1	7499	7499		44.117	9.9443	1	768200			13039	12987	8961	8969	15012	15012					0.048394536773685104
GRSPTVPR	8	Unmodified	_GRSPTVPR_					0	0	0		ENST00000509375.5_1_4:81105174-81118128:+|nuORF	ENST00000509375.5_1_4:81105174-81118128:+|nuORF	ENST00000509375.5_1_4:81105174-81118128:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25146484375	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.87064	1	7780	7780		29.15	3.6994	1	3292300			13040	12987	8961	8969	15013	15013					0.048394536773685104
GRSQLQARPLL	11	Unmodified	_GRSQLQARPLL_					0	0	0		ENST00000382313.2_1_16:2787232-2787705:-|nuORF;ENST00000573802.1_1_16:2787232-2793608:-|nuORF	ENST00000382313.2_1_16:2787232-2787705:-|nuORF	ENST00000382313.2_1_16:2787232-2787705:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8692626953125	2	619.870028	1237.7255	-1.2246	-0.00075909	0.27155	0.00016833	-0.95304	-0.00059076	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.65746	1	9958	9958		37.812	3.639	1	6224400			13041	10973	8962	8970	15014	15014					0.11614974819940471
GRSRRGKKR	9	Unmodified	_GRSRRGKKR_					0	0	0		nc|ENSG00000143479|O43781-2|DYRK3;ENSG00000143479|ENST00000367109|DYRK3	nc|ENSG00000143479|O43781-2|DYRK3	nc|ENSG00000143479|O43781-2|DYRK3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.8421020507812	2	550.847222	1099.67989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.196	1	20.196	19.696	20.696	0								0	0	0	0.3307	1	472	472		19.997	5.1319	1				13042	4635	8963	8971	15015	15015					0.13403794148234738
GRSSYRAT	8	Unmodified	_GRSSYRAT_					0	0	0		CON__Q92764;ENSG00000197079|ENST00000246639|KRT35	CON__Q92764	CON__Q92764	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.23199462890625	2	449.230491	896.446428	-0.14348	-6.4457E-05	0.39856	0.00017905	0.25508	0.00011459	449.2306007992336	83.429	3.7259	83.496	82.088	85.814	0.066719					221	85	3	0	0	0	0.90523	1	8275	8275		40.778	5.5774	1	236580		+	13043	634	8964	8972	15016	15016					-0.0059372708195724044
GRSVGQCH	8	Unmodified	_GRSVGQCH_					0	0	0		nc|ENSG00000188107|Q5T1H1|EYS;ENSG00000188107|ENST00000503581|EYS	nc|ENSG00000188107|Q5T1H1|EYS	nc|ENSG00000188107|Q5T1H1|EYS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.198486328125	2	422.198136	842.381719	0.088661	3.7433E-05	1.418	0.00059866	1.5066	0.0006361	422.198858438519	84.305	3.2598	84.752	82.851	86.111	0.44736					161	79	3	0	0	0	0.884	1	9818	9818		33.516	1.5607	1	1051400			13044	15168	8965	8973	15017	15017					-0.045776251596066686
GRSYSPYLR	9	Unmodified	_GRSYSPYLR_					0	0	0			REV__ENST00000607315.1_1_8:30013391-30013664:-|nuORF	REV__ENST00000607315.1_1_8:30013391-30013664:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.7874755859375	2	549.788173	1097.56179	-0.5678	-0.00031217	-1.6076	-0.00088383	-2.1754	-0.001196	549.7871709244522	110.43	1.0169	110.37	110.18	111.2	-0.055084					52	35	3	0	0	0	0.73802	1	12041	12041		37.812	2.6595	1	254500	+		13045	29386	8966	8974	15018	15018					0.016913770490191382
GRTEALRYY	9	Unmodified	_GRTEALRYY_					0	0	0			REV__ENST00000513120.2_1_4:8605677-8612970:+|nuORF	REV__ENST00000513120.2_1_4:8605677-8612970:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.3101806640625	2	564.793455	1127.57236	0.2636	0.00014888	-1.4383	-0.00081232	-1.1747	-0.00066345	564.7926199184133	75.478	0.62208	75.873	75.574	76.196	0.39507					25	14	2	0	0	0	0.20789	1	8506	8506		18.262	0	1	630680	+		13046	27989	8967	8975	15019	15019					0.013673597034767226
GRTGAALPG	9	Unmodified	_GRTGAALPG_					0	0	0			REV__ENST00000482783.1_1_1:84394911-84464689:-|nuORF	REV__ENST00000482783.1_1_1:84394911-84464689:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2265319824219	2	400.224677	798.434801	-0.073338	-2.9352E-05	4.3831	0.0017542	4.3097	0.0017249	400.22636614843225	35.501	1.6335	35.44	35.254	36.887	-0.060337					96	46	3	0	0	0	0.76255	1	1871	1871		35.618	2.1253	1	419330	+		13047	27314	8968	8976	15020	15020					0.027520758947161994
GRTGSIRS	8	Unmodified	_GRTGSIRS_					0	0	0			REV__ENST00000336199.9_1_1:243716234-243727052:-|nuORF	REV__ENST00000336199.9_1_1:243716234-243727052:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.7333068847656	2	417.233033	832.451513	-1.9007	-0.00079304	0.15977	6.6659E-05	-1.741	-0.00072638	417.23406411050627	32.902	0.70251	32.955	32.632	33.335	0.05246					59	32	3	0	0	0	0.89962	1	1576	1576		38.806	1.647	1	130350	+		13048	25182	8969	8977	15021	15021					0.0285857678065895
GRTILCSPCSL	11	Unmodified	_GRTILCSPCSL_					0	0	0			REV__ENST00000609274.5_2_19:15562561-15562630:-|nuORF	REV__ENST00000609274.5_2_19:15562561-15562630:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.295166015625	2	575.291376	1148.5682	-0.40049	-0.0002304	1.7784	0.0010231	1.378	0.00079272	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.66929	1	8739	8739		36.447	2.2742	1	1396200	+		13049	29410	8970	8978	15022	15022					-0.00014189106104822713
GRTPRPPSKLV	11	Unmodified	_GRTPRPPSKLV_					0	0	0			REV__ENST00000586582.5_1_19:4543214-4543517:-|nuORF	REV__ENST00000586582.5_1_19:4543214-4543517:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3651733398438	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.77061	1	12715	12715		17.468	3.3309	1	3346600	+		13050	29107	8971	8979	15023	15023					0.12459876308253115
GRTQIRLNIK	10	Unmodified	_GRTQIRLNIK_					0	0	0			REV__ENSG00000186184|ENST00000302979|POLR1D	REV__ENSG00000186184|ENST00000302979|POLR1D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.2487487792969	3	400.250806	1197.73059	-0.37081	-0.00014842	-3.8291	-0.0015326	-4.1999	-0.001681	400.24881333281155	24.759	1.4507	24.713	23.876	25.327	-0.04598					79	33	4	0	0	0	0.85633	1	1026	1026		21.686	0	1	107720	+		13051	22829	8972	8980	15024	15024					0.1396327868253593
GRTRNGGN	8	Unmodified	_GRTRNGGN_					0	0	0			REV__ENSG00000248905|ENST00000616417|FMN1	REV__ENSG00000248905|ENST00000616417|FMN1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	415.2530212402344	2	416.212632	830.410711	0.5912	0.00024607	-2.3016	-0.00095797	-1.7104	-0.0007119	416.21152042016854	85.007	0.43332	85.156	84.82	85.254	0.14857					15	9	2	0	0	0	0.4196	1	8309	8309		15.642	0	1	34995	+		13052	23863	8973	8981	15025	15025					-0.011277645389554891
GRTRWLRPVI	10	Unmodified	_GRTRWLRPVI_					0	0	0		ENST00000331573.7_1_21:40555680-40555749:-|nuORF	ENST00000331573.7_1_21:40555680-40555749:-|nuORF	ENST00000331573.7_1_21:40555680-40555749:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3831787109375	2	627.383106	1252.75166	2.3056	0.0014465	-3.4537	-0.0021668	-1.1481	-0.0007203	627.3806379935313	112.21	0.77449	112.24	112.06	112.83	0.030594					92	29	4	0	0	0	0.86763	1	13597	13597		26.693	1.1189	1	15506000			13053	10129	8974	8982	15026	15026					0.1353928878206716
GRTSALLR	8	Unmodified	_GRTSALLR_					0	0	0		ENST00000493518.5_1_10:120514304-120514760:-|nuORF	ENST00000493518.5_1_10:120514304-120514760:-|nuORF	ENST00000493518.5_1_10:120514304-120514760:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2680969238281	2	437.266876	872.519199	-1.623	-0.00070968	-0.64692	-0.00028288	-2.2699	-0.00099256	437.2663471157278	25.307	0.46806	25.371	25.107	25.575	0.063122					29	22	2	0	0	0	0.86677	1	921	921		27.882	2.4321	1	67724			13054	12729	8975	8983	15027	15027					0.07784026711476599
GRTSALLR	8	Unmodified	_GRTSALLR_					0	0	0		ENST00000493518.5_1_10:120514304-120514760:-|nuORF	ENST00000493518.5_1_10:120514304-120514760:-|nuORF	ENST00000493518.5_1_10:120514304-120514760:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	437.266876	872.519199	0.057956	2.5342E-05	-2.396	-0.0010477	-2.3381	-0.0010224	437.2657943518621	25.249	0.5138	25.349	25.175	25.689	0.10045	0.066608	0.0018921	NaN	27.882	39	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58715			13055	12729	8975	8983							0.07784026711476599
GRVIGKGVN	9	Unmodified	_GRVIGKGVN_					0	0	0		ENST00000435000.2_1_1:146523764-146523956:+|nuORF	ENST00000435000.2_1_1:146523764-146523956:+|nuORF	ENST00000435000.2_1_1:146523764-146523956:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2742614746094	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.78983	1	9502	9502		27.882	2.4321	1	26247000			13056	11703	8976	8984	15028	15028					0.08152313228515595
GRVISDDVLVI	11	Unmodified	_GRVISDDVLVI_					0	0	0			REV__ENST00000496669.1_1_3:87100344-87100812:-|nuORF	REV__ENST00000496669.1_1_3:87100344-87100812:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	593.3421020507812	2	593.34552	1184.67649	-0.22642	-0.00013434	-1.2506	-0.00074204	-1.477	-0.00087638	593.3446713104415	103.73	2.3003	103.73	103.29	105.59	0					144	55	4	0	0	0	0.7144	1	10732	10732		29.17	2.1227	1	1751500	+		13057	18761	8977	8985	15029	15029					0.09153641740294916
GRVKYTLNKNS	11	Unmodified	_GRVKYTLNKNS_					0	0	0		ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3580322265625	2	640.359493	1278.70443	-0.024279	-1.5547E-05	-0.77441	-0.0004959	-0.79869	-0.00051145	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.58425	1	10109	10109		45.972	1.5951	1	448130			13058	1521	8978	8986	15030	15030					0.07622964720439995
GRVLKLVL	8	Unmodified	_GRVLKLVL_					0	0	0		ENST00000277198.6_1_9:97522838-97555152:+|nuORF	ENST00000277198.6_1_9:97522838-97555152:+|nuORF	ENST00000277198.6_1_9:97522838-97555152:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.8731384277344	2	449.315838	896.617122	-0.011478	-5.1573E-06	-2.9872	-0.0013422	-2.9986	-0.0013473	449.31457399978854	19.93	1.0223	19.46	19.113	20.135	-0.46967					26	21	2	0	0	0	0.4196	1	574	574		14.664	0	1	37409			13059	9605	8979	8987	15031	15031					0.1646783530744642
GRVQKILHWRW	11	Unmodified	_GRVQKILHWRW_					0	0	0		nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170004|Q12873-2|CHD3;ENSG00000170004|ENST00000330494|CHD3	nc|ENSG00000170004|Q12873-3|CHD3	nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.6201171875	3	493.621233	1477.84187	-1.8007	-0.00088885	1.3697	0.00067612	-0.43094	-0.00021272	493.6218802691259	31.167	0.9176	31.167	30.72	31.638	0					75	31	3	0	0	0	0.79224	1	1512	1512		12.957	0.52465	1	50794			13060	15087	8980	8988	15032	15032					0.12206338110490833
GRVQPVGP	8	Unmodified	_GRVQPVGP_					0	0	0			REV__ENST00000461154.1_1_19:51206993-51207275:-|nuORF	REV__ENST00000461154.1_1_19:51206993-51207275:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.23736572265625	2	405.235045	808.455536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.291	1	63.319	62.819	63.819	0.028133								0	0	0	0.29498	1	5921	5921		26.796	7.4361	1		+		13061	27022	8981	8989	15033	15033					0.04364666274375395
GRVSLVHPFP	10	Unmodified	_GRVSLVHPFP_					0	0	0			REV__ENST00000436427.1_3_1:43148660-43161876:+|nuORF	REV__ENST00000436427.1_3_1:43148660-43161876:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.8327026367188	2	554.816733	1107.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.089	1	21.089	20.589	21.589	0								0	0	0	0.45132	1	546	546		35.152	2.3396	1		+		13062	26691	8982	8990	15034	15034					0.06940844325413309
GRVYKVRNK	9	Unmodified	_GRVYKVRNK_					0	0	0		nc|ENSG00000086232|Q9BQI3-2|EIF2AK1;ENSG00000086232|ENST00000199389|EIF2AK1	nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3402099609375	2	560.340907	1118.66726	0.37477	0.00021	-1.7233	-0.00096563	-1.3485	-0.00075563	560.3398544470892	89.255	3.3389	89.463	87.161	90.5	0.2073					181	78	4	0	0	0	0.78536	1	8948	8948		29.15	1.2673	1	715790			13063	1554	8983	8991	15035	15035					0.11267337965296065
GRVYKVRNK	9	Unmodified	_GRVYKVRNK_					0	0	0		nc|ENSG00000086232|Q9BQI3-2|EIF2AK1;ENSG00000086232|ENST00000199389|EIF2AK1	nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3409423828125	2	560.340907	1118.66726	-1.204	-0.00067466	0.24305	0.00013619	-0.96096	-0.00053847	560.3409757203636	89.276	1.5732	89.747	88.641	90.214	0.47068					77	38	4	0	0	0	0.76255	1	10586	10586		35.618	5.3006	1	617690			13064	1554	8983	8991	15036	15036					0.11267337965296065
GRYEAWTEL	9	Unmodified	_GRYEAWTEL_					0	0	0			REV__ENST00000378540.8_1_2:44396339-44428358:+|nuORF	REV__ENST00000378540.8_1_2:44396339-44428358:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.7750854492188	2	562.772188	1123.52982	-0.42127	-0.00023708	0.78043	0.0004392	0.35916	0.00020212	562.7727098274542	60.482	0.68708	60.872	60.569	61.256	0.38945					43	18	3	0	0	0	0.33718	1	6423	6423		62.107	14.192	1	808750	+		13065	25900	8984	8992	15037	15037					-0.02700035424777525
GRYHCQYY	8	Unmodified	_GRYHCQYY_					0	0	0		nc|ENSG00000239998|Q8N149-3|LILRA2;nc|ENSG00000239998|Q8N149-4|LILRA2;nc|ENSG00000239998|Q8N149-2|LILRA2;ENSG00000239998|ENST00000391738|LILRA2	nc|ENSG00000239998|Q8N149-3|LILRA2	nc|ENSG00000239998|Q8N149-3|LILRA2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.2437133789062	2	545.232176	1088.4498	-1.1678	-0.00063672	-0.14958	-8.1555E-05	-1.3174	-0.00071827	545.232007279963	55.929	0.43286	55.929	55.662	56.095	0					19	11	2	0	0	0	0.4196	1	4790	4790		33.516	12.569	1	89972			13066	8776	8985	8993	15038	15038					-0.09088800299605282
GSAAVIGKM	9	Unmodified	_GSAAVIGKM_					0	0	0			REV__nc|ENSG00000177426|Q15583|TGIF1	REV__nc|ENSG00000177426|Q15583|TGIF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2331848144531	2	417.231113	832.447674	0.11985	5.0006E-05	2.7756	0.0011581	2.8955	0.0012081	417.23328861254936	32.607	0.53484	32.717	32.499	33.034	0.10991					51	25	3	0	0	0	0.74721	1	1534	1534		37.159	1.9584	1	151210	+		13067	30056	8986	8994	15039	15039					0.024747709625899006
GSAIPMKIRNV	11	Unmodified	_GSAIPMKIRNV_					0	0	0		ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-4|ELAC2;ENSG00000006744|ENST00000338034|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-2|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF	ENST00000484122.5_1_17:12899737-12920449:-|nuORF	ENST00000484122.5_1_17:12899737-12920449:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	593.3446044921875	2	593.342258	1184.66996	-0.61427	-0.00036447	4.2792	0.002539	3.6649	0.0021745	593.3447041008176	103.62	2.4136	103.61	103.22	105.64	-0.0035706					155	57	4	0	0	0	0.7434	1	11245	11245		23.523	2.5758	1	2207400			13068	712	8987	8995	15040	15040					0.08501425307963473
GSAIPMKIRNV	11	Unmodified	_GSAIPMKIRNV_					0	0	0		ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-4|ELAC2;ENSG00000006744|ENST00000338034|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-2|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF	ENST00000484122.5_1_17:12899737-12920449:-|nuORF	ENST00000484122.5_1_17:12899737-12920449:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	593.3426513671875	2	593.342258	1184.66996	3.3538	0.0019899	0.12829	7.6121E-05	3.4821	0.0020661	593.3422294286001	103.53	2.4934	103.48	103.12	105.61	-0.043755					162	59	4	0	0	0	0.7342	1	11440	11440		25.574	1.0549	1	2080000			13069	712	8987	8995	15041	15041					0.08501425307963473
GSALQKLFIV	10	Unmodified	_GSALQKLFIV_					0	0	0			REV__ENST00000426826.2_1_1:150026325-150026897:+|nuORF	REV__ENST00000426826.2_1_1:150026325-150026897:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.32568359375	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.85939	1	12776	12776		23.042	3.0457	1	4041000	+		13070	26549	8988	8996	15042	15042					0.1093947940810267
GSAPADPPQP	10	Unmodified	_GSAPADPPQP_					0	0	0			REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.2411193847656	2	468.724707	935.43486	-0.99407	-0.00046595	1.4211	0.00066612	0.42705	0.00020017	468.7251357387704	38.354	0.41205	38.876	38.75	39.162	0.52235					13	9	2	0	0	0	0.37624	1	3206	3206		24.519	4.5224	1	76400	+		13071	18722	8989	8997	15043	15043					-0.03543968895951366
GSAPADPPQP	10	Unmodified	_GSAPADPPQP_					0	0	0			REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	468.724707	935.43486	-1.8247	-0.0008553	2.3287	0.0010915	0.50392	0.0002362	468.72556016622684	38.559	0.22132	38.559	38.376	38.597	0	-0.21524	0.00094412	NaN	24.519	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14695	+		13072	18722	8989	8997							-0.03543968895951366
GSAPADPPQP	10	Unmodified	_GSAPADPPQP_					0	0	0			REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	468.724707	935.43486	-0.72784	-0.00034116	0.52012	0.00024379	-0.20772	-9.7362E-05	468.72481243634627	38.545	0.36795	38.887	38.697	39.065	0.34187	0.11282	-0.00075129	NaN	24.519	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72842	+		13073	18722	8989	8997							-0.03543968895951366
GSAPSPFVW	9	Unmodified	_GSAPSPFVW_					0	0	0			REV__ENST00000476372.1_1_11:293373-294746:+|nuORF	REV__ENST00000476372.1_1_11:293373-294746:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.2324523925781	2	474.23471	946.454868	-1.2869	-0.00061028	-3.1594	-0.0014983	-4.4463	-0.0021086	474.23308037889285	39.831	1.0553	39.787	39.407	40.462	-0.043694					35	24	2	0	0	0	0.47272	1	2912	2912		53.351	2.1588	1	313750	+		13074	27329	8990	8998	15044	15044					-0.020501731653325805
GSAPSPFVW	9	Unmodified	_GSAPSPFVW_					0	0	0			REV__ENST00000476372.1_1_11:293373-294746:+|nuORF	REV__ENST00000476372.1_1_11:293373-294746:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	474.2319641113281	2	474.23471	946.454868	0.015697	7.444E-06	-4.4262	-0.0020991	-4.4105	-0.0020916	474.2323962600086	39.782	0.72729	39.734	39.423	40.15	-0.047886					32	18	3	0	0	0	0.69914	1	2459	2459		40.573	1.819	1	159300	+		13075	27329	8990	8998	15045	15045					-0.020501731653325805
GSAPSPFVW	9	Unmodified	_GSAPSPFVW_					0	0	0			REV__ENST00000476372.1_1_11:293373-294746:+|nuORF	REV__ENST00000476372.1_1_11:293373-294746:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	474.23471	946.454868	-2.3357	-0.0011076	-2.1913	-0.0010392	-4.527	-0.0021469	474.23360634784694	39.838	0.93525	39.847	39.428	40.363	0.0092812	0.01427	0.0014062	NaN	53.351	32	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	349550	+		13076	27329	8990	8998							-0.020501731653325805
GSAPSPFVW	9	Unmodified	_GSAPSPFVW_					0	0	0			REV__ENST00000476372.1_1_11:293373-294746:+|nuORF	REV__ENST00000476372.1_1_11:293373-294746:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	474.23471	946.454868	-0.99035	-0.00046966	-3.2661	-0.0015489	-4.2564	-0.0020185	474.2329840700076	39.88	0.71846	39.886	39.633	40.351	0.0065002	0.053334	0.00038688	NaN	53.351	29	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116890	+		13077	27329	8990	8998							-0.020501731653325805
GSAPSPFVW	9	Unmodified	_GSAPSPFVW_					0	0	0			REV__ENST00000476372.1_1_11:293373-294746:+|nuORF	REV__ENST00000476372.1_1_11:293373-294746:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	474.23471	946.454868	0.015697	7.444E-06	-4.4262	-0.0020991	-4.4105	-0.0020916	474.2323962600086	39.782	0.72729	39.734	39.423	40.15	-0.047886	-0.098551	-0.00071348	NaN	53.351	32	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	159300	+		13078	27329	8990	8998							-0.020501731653325805
GSASGHQGH	9	Unmodified	_GSASGHQGH_					0	0	0			REV__ENSG00000197915|ENST00000368801|HRNR	REV__ENSG00000197915|ENST00000368801|HRNR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.1839904785156	2	419.18354	836.352528	0.66145	0.00027727	1.3446	0.00056364	2.0061	0.0008409	419.1832644153146	92.644	1.2902	92.803	92.369	93.659	0.15874					85	30	4	0	0	0	0.55097	1	9377	9377		49.442	10.635	1	854090	+	+	13079	16027	8991	8999	15046	15046					-0.07219446184228673
GSASGHQGH	9	Unmodified	_GSASGHQGH_					0	0	0			REV__ENSG00000197915|ENST00000368801|HRNR	REV__ENSG00000197915|ENST00000368801|HRNR	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	419.18354	836.352528	-0.18672	-7.8271E-05	0.63197	0.00026491	0.44525	0.00018664	419.1836976726793	93.077	0.95241	93.147	92.799	93.751	0.069862	0.27102	0.0019034	NaN	49.442	48	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	280020	+	+	13080	16027	8991	8999							-0.07219446184228673
GSASGHQGH	9	Unmodified	_GSASGHQGH_					0	0	0			REV__ENSG00000197915|ENST00000368801|HRNR	REV__ENSG00000197915|ENST00000368801|HRNR	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	419.18354	836.352528	1.6815	0.00070488	-1.7835	-0.00074762	-0.10196	-4.2742E-05	419.1827060618058	93.236	0.90953	93.175	92.847	93.756	-0.061432	0.2988	-0.00012171	NaN	49.442	36	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	303320	+	+	13081	16027	8991	8999							-0.07219446184228673
GSASGHQGH	9	Unmodified	_GSASGHQGH_					0	0	0			REV__ENSG00000197915|ENST00000368801|HRNR	REV__ENSG00000197915|ENST00000368801|HRNR	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	419.18354	836.352528	3.1798	0.0013329	-3.3427	-0.0014012	-0.16285	-6.8266E-05	419.1820698619843	92.983	1.2552	93.029	92.539	93.794	0.045448	0.1524	-0.0014289	NaN	49.442	44	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	230090	+	+	13082	16027	8991	8999							-0.07219446184228673
GSCIPLPAS	9	Unmodified	_GSCIPLPAS_					0	0	0		chr19:46120320-46123886|33|109.58|0.18|9.23|-|2|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120320|None,IGFL3|3;chr19:46120307-46123886|31|103.61|0.08|10.33|-|1|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120307|None,IGFL3|3	chr19:46120320-46123886|33|109.58|0.18|9.23|-|2|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120320|None,IGFL3|3	chr19:46120320-46123886|33|109.58|0.18|9.23|-|2|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120320|None,IGFL3|3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	423.1981201171875	2	422.715296	843.416039	-1.3511	-0.00057112	-2.2928	-0.00096919	-3.6438	-0.0015403	422.7143139689365	73.271	0.38828	73.354	73.095	73.483	0.083138					17	12	2	0	0	0	0.20789	1	6733	6733		19.997	0	1	70104			13083	282	8992	9000	15047	15047					-0.01193221791356791
GSCSFSIH	8	Unmodified	_GSCSFSIH_					0	0	0		nc|ENSG00000168077|Q6AZY7-2|SCARA3;ENSG00000168077|ENST00000301904|SCARA3	nc|ENSG00000168077|Q6AZY7-2|SCARA3	nc|ENSG00000168077|Q6AZY7-2|SCARA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1841125488281	2	419.18162	836.348688	2.0844	0.00087374	2.1028	0.00088145	4.1872	0.0017552	419.1826528067583	100.01	2.1606	100.34	99.379	101.54	0.33294					130	55	5	0	0	0	0.884	1	12096	12096		33.516	4.366	1	8540100			13084	6366	8993	9001	15048	15048					-0.0760325200232046
GSCVAGCNC	9	Unmodified	_GSCVAGCNC_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78533935546875	2	407.138041	812.261529	-0.093314	-3.7991E-05	-3.0332	-0.0012349	-3.1265	-0.0012729	407.13667439190255	34.086	0.55837	34.081	33.775	34.334	-0.0047417					18	12	2	0	0	0	0.20789	1	2052	2052		14.865	3.3539	1	22720			13085	15193	8994	9002	15049	15049					-0.15211117539899988
GSDHLQVSRL	10	Unmodified	_GSDHLQVSRL_					0	0	0			REV__nc|ENSG00000160712|P08887-2|IL6R	REV__nc|ENSG00000160712|P08887-2|IL6R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	556.299560546875	2	556.296362	1110.57817	0.24575	0.00013671	2.9022	0.0016145	3.1479	0.0017512	556.2977452704006	75.861	0.66244	75.815	75.554	76.217	-0.045982					33	16	3	0	0	0	0.76096	1	7505	7505		41.427	6.2746	1	159240	+		13086	20734	8995	9003	15050	15050					0.027304582151600698
GSDSVVLYLY	10	Unmodified	_GSDSVVLYLY_					0	0	0			REV__ENSG00000187266|ENST00000222139|EPOR	REV__ENSG00000187266|ENST00000222139|EPOR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.28515625	2	558.284597	1114.55464	-1.0256	-0.0005726	1.1915	0.00066522	0.1659	9.262E-05	558.2848413699397	75.44	0.58796	75.486	75.204	75.792	0.045959					38	17	3	0	0	0	0.53935	1	7253	7253		53.351	1.0523	1	79645	+		13087	22911	8996	9004	15051	15051					0.0019459965797068435
GSELELPV	8	Unmodified	_GSELELPV_					0	0	0		nc|ENSG00000103021|Q9H0I3-2|CFAP263;ENSG00000103021|ENST00000219299|CCDC113	nc|ENSG00000103021|Q9H0I3-2|CFAP263	nc|ENSG00000103021|Q9H0I3-2|CFAP263	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2274475097656	2	422.226551	842.438549	-0.18805	-7.94E-05	3.6659	0.0015478	3.4778	0.0014684	422.2279917800992	63.929	0.72619	63.928	63.441	64.167	-0.00078583					51	28	3	0	0	0	0.90465	1	5982	5982		40.573	1.7665	1	195170			13088	2042	8997	9005	15052	15052					0.011027008779024072
GSEVLKVVAM	10	Unmodified	_GSEVLKVVAM_					0	0	0		nc|ENSG00000148600|Q96JP9-2|CDHR1;ENSG00000148600|ENST00000623527|CDHR1	nc|ENSG00000148600|Q96JP9-2|CDHR1	nc|ENSG00000148600|Q96JP9-2|CDHR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7936401367188	2	516.791535	1031.56852	-0.047502	-2.4548E-05	3.7971	0.0019623	3.7496	0.0019377	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.86348	1	9031	9031		31.53	2.3803	1	692890			13089	4970	8998	9006	15053	15053					0.053995538853769176
GSGAPWLR	8	Unmodified	_GSGAPWLR_					0	0	0		nc|ENSG00000186493|Q86SI9-3|IRX2-DT;nc|ENSG00000186493|Q86SI9|IRX2-DT;nc|ENSG00000186493|Q86SI9-2|IRX2-DT	nc|ENSG00000186493|Q86SI9-3|IRX2-DT	nc|ENSG00000186493|Q86SI9-3|IRX2-DT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2276916503906	2	422.22722	842.439886	-1.8115	-0.00076488	3.6243	0.0015303	1.8127	0.00076538	422.2286507629438	57.274	2.0296	57.354	56.645	58.675	0.079643					188	95	3	0	0	0	0.86288	1	4837	4837		26.796	1.3459	1	748250			13090	15159	8999	9007	15054	15054					0.012363797573129887
GSGATGKMIL	10	Unmodified	_GSGATGKMIL_					0	0	0		nc|ENSG00000116791|Q08257-2|CRYZ;nc|ENSG00000116791|Q08257-3|CRYZ;ENSG00000116791|ENST00000340866|CRYZ	nc|ENSG00000116791|Q08257-2|CRYZ	nc|ENSG00000116791|Q08257-2|CRYZ	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.7540283203125	2	467.754953	933.495352	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.665	1	56.771	56.271	57.271	0.1055								0	0	0	0.45132	1	4778	4778		31.53	3.2755	1				13091	2949	9000	9008	15055	15055					0.025944251627834092
GSGCGGGGG	9	Unmodified	_GSGCGGGGG_					0	0	0		CON__Q7Z794;ENSG00000189182|ENST00000341809|KRT77;ENST00000471578.5_1_1:224622371-224703543:+|nuORF	CON__Q7Z794	CON__Q7Z794	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.8364868164062	1	608.2093	607.202024	-0.14776	-8.9871E-05	-3.8242	-0.0023259	-3.972	-0.0024158	608.2093851840247	112.37	1.7785	112.37	110.92	112.7	0					91	69	2	0	0	0	0.20789	1	11549	11549		7.6903	3.0085	1	18646		+	13092	630	9001	9009	15056	15056					-0.11728929167406932
GSGCGGGGG	9	Unmodified	_GSGCGGGGG_					0	0	0		CON__Q7Z794;ENSG00000189182|ENST00000341809|KRT77;ENST00000471578.5_1_1:224622371-224703543:+|nuORF	CON__Q7Z794	CON__Q7Z794	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		1	608.2093	607.202024	-0.44054	-0.00026794	-3.188	-0.001939	-3.6286	-0.0022069	608.2099724332423	112.13	1.5319	112.06	111.33	112.86	-0.063889	-0.036569	0.00068987	NaN	3.6843	93	54	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17635		+	13093	630	9001	9009							-0.11728929167406932
GSGCGGGGG	9	Unmodified	_GSGCGGGGG_					0	0	0		CON__Q7Z794;ENSG00000189182|ENST00000341809|KRT77;ENST00000471578.5_1_1:224622371-224703543:+|nuORF	CON__Q7Z794	CON__Q7Z794	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		1	608.2093	607.202024	2.584	0.0015716	-6.0491	-0.0036791	-3.4652	-0.0021075	608.2078338755468	111.82	0.17061	111.87	111.78	111.95	0.041832	-0.23434	-0.0010503	NaN	3.6843	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16403		+	13094	630	9001	9009							-0.11728929167406932
GSGDWRLL	8	Unmodified	_GSGDWRLL_					0	0	0		ENSG00000119669|ENST00000238647|IRF2BPL	ENSG00000119669|ENST00000238647|IRF2BPL	ENSG00000119669|ENST00000238647|IRF2BPL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.943603515625	2	452.237784	902.461016	-1.288	-0.0005825	2.891	0.0013074	1.603	0.00072494	452.2389853509119	55.724	1.0312	55.788	55.259	56.29	0.063721					59	41	2	0	0	0	0.4196	1	4633	4633		38.806	35.122	1	124880			13095	3083	9002	9010	15057	15057					0.005883450661826828
GSGEEEEEEEE	11	Unmodified	_GSGEEEEEEEE_					0	0	0		nc|ENSG00000172273|Q9BQA5-2|HINFP;ENSG00000172273|ENST00000350777|HINFP;ENST00000527206.1_1_11:118992311-118998053:+|nuORF;ENST00000529354.1_1_11:118992311-119001682:+|nuORF	REV__nc|ENSG00000105227|Q9BXM0-3|PRX;REV__ENSG00000176058|ENST00000409012|TPRN;REV__nc|ENSG00000182606|Q9UPV9-2|TRAK1;ENSG00000172273|ENST00000350777|HINFP;ENST00000527206.1_1_11:118992311-118998053:+|nuORF	REV__nc|ENSG00000105227|Q9BXM0-3|PRX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.7218017578125	2	626.720409	1251.42627	0.60379	0.00037841	-0.98628	-0.00061812	-0.38249	-0.00023971	626.7196598761815	23.546	0.59087	23.496	23.255	23.846	-0.049166					39	22	2	0	0	0	0.78658	1	794	794		14.137	0	1	39694			13096	17516;22104;30079;6758;13276	9003	9011	15058	15058					-0.18939076904393914
GSGGGGGSLR	10	Unmodified	_GSGGGGGSLR_					0	0	0			REV__ENST00000510746.1_1_4:69209793-69215570:-|nuORF	REV__ENST00000510746.1_1_4:69209793-69215570:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.7038269042969	2	402.701566	803.388579	2.8107	0.0011319	2.5005	0.0010069	5.3112	0.0021388	402.7025728416904	25.135	0.51849	25.098	24.93	25.448	-0.037178					23	14	2	0	0	0	0.86802	1	988	988		27.047	1.4733	1	42731	+		13097	27960	9004	9012	15059	15059					-0.020979890073704155
GSGGPGAQNH	10	Unmodified	_GSGGPGAQNH_					0	0	0		nc|ENSG00000182208|Q70IA6|MOB2;ENSG00000182208|ENST00000329957|MOB2	nc|ENSG00000182208|Q70IA6|MOB2	nc|ENSG00000182208|Q70IA6|MOB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.1937561035156	2	441.196648	880.378742	1.3728	0.00060569	-1.1656	-0.00051425	0.20725	9.1439E-05	441.19600127736516	103.65	0.51379	103.84	103.6	104.11	0.18888					28	12	3	0	0	0	0.64457	1	12632	12632		47.657	3.1263	1	649240			13098	7433	9005	9013	15060	15060					-0.06623177012772885
GSGHVTVF	8	Unmodified	_GSGHVTVF_					0	0	0		ENST00000509678.1_1_4:54915115-54930467:-|nuORF;ENSG00000109220|ENST00000263921|CHIC2	ENST00000509678.1_1_4:54915115-54930467:-|nuORF	ENST00000509678.1_1_4:54915115-54930467:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	402.2044677734375	2	402.205953	802.397353	-1.0356	-0.00041653	0.5047	0.00020299	-0.53091	-0.00021354	402.2060768778475	98.029	2.4948	98.029	96.767	99.262	0					118	59	3	0	0	0	0.89962	1	9833	9833		38.806	6.8513	1	480830			13099	2456	9006	9014	15061	15061					-0.011750153708931066
GSGIGTPPSVL	11	Unmodified	_GSGIGTPPSVL_					0	0	0		nc|ENSG00000101057|P10244-2|MYBL2;ENSG00000101057|ENST00000217026|MYBL2	nc|ENSG00000101057|P10244-2|MYBL2	nc|ENSG00000101057|P10244-2|MYBL2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.7712707519531	2	492.771657	983.528761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.492	1	72.534	72.034	73.034	0.042114								0	0	0	0.56276	1	6976	6976		25.574	0.12388	1				13100	1895	9007	9015	15062	15062					0.036337502063247484
GSGKGAPGRG	10	Unmodified	_GSGKGAPGRG_					0	0	0		ENST00000592467.1_1_19:1261169-1261487:+|nuORF	ENST00000592467.1_1_19:1261169-1261487:+|nuORF	ENST00000592467.1_1_19:1261169-1261487:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.227294921875	2	422.225208	842.435863	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.609	1	61.639	61.139	62.139	0.029575								0	0	0	0.45132	1	5740	5740		52.937	5.2794	1				13101	14289	9008	9016	15063	15063					0.008342902636286453
GSGKGAPGRG	10	Unmodified	_GSGKGAPGRG_					0	0	0		ENST00000592467.1_1_19:1261169-1261487:+|nuORF	ENST00000592467.1_1_19:1261169-1261487:+|nuORF	ENST00000592467.1_1_19:1261169-1261487:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.2286682128906	2	422.225208	842.435863	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.992	1	62.022	61.522	62.522	0.029575								0	0	0	0.45132	1	5788	5788		36.447	4.8679	1				13102	14289	9008	9016	15064	15064					0.008342902636286453
GSGKGAPGRG	10	Unmodified	_GSGKGAPGRG_					0	0	0		ENST00000592467.1_1_19:1261169-1261487:+|nuORF	ENST00000592467.1_1_19:1261169-1261487:+|nuORF	ENST00000592467.1_1_19:1261169-1261487:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.2298583984375	2	422.225208	842.435863	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.088	1	62.118	61.618	62.618	0.029575								0	0	0	0.45132	1	5801	5801		30.318	3.5216	1				13103	14289	9008	9016	15065	15065					0.008342902636286453
GSGKKLGTKH	10	Unmodified	_GSGKKLGTKH_					0	0	0			REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|1|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|29	REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|1|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.799560546875	2	506.79854	1011.58253	0.2762	0.00013998	4.2956	0.002177	4.5718	0.002317	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.63899	2	3298	3298;3494		47.96	7.1814	1	416790	+		13104	15524	9009	9017	15066;15067	15066					0.07719967428727159
GSGKKLGTKH	10	Unmodified	_GSGKKLGTKH_					0	0	0			REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|1|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|29	REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|1|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|29	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80010986328125	2	506.79854	1011.58253	0.2918	0.00014788	3.8962	0.0019746	4.188	0.0021225	506.8005319323782	43.625	1.7295	43.682	42.323	44.053	0.056747					65	45	2	0	0	0	0.86698	1	3045	3045		28.081	3.8787	1	255230	+		13105	15524	9009	9017	15068	15068					0.07719967428727159
GSGKKLGTKH	10	Unmodified	_GSGKKLGTKH_					0	0	0			REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|1|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|29	REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|1|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|29	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8011474609375	2	506.79854	1011.58253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.63	1	43.58	43.08	44.08	-0.050308								0	0	0	0.45132	1	3018	3018		28.081	0.19925	1		+		13106	15524	9009	9017	15069	15069					0.07719967428727159
GSGLFPPLF	9	Unmodified	_GSGLFPPLF_					0	0	0		ENSG00000111432|ENST00000229030|FZD10	ENSG00000111432|ENST00000229030|FZD10	ENSG00000111432|ENST00000229030|FZD10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.7532958984375	2	467.755278	933.496004	-0.60625	-0.00028358	-3.9479	-0.0018466	-4.5541	-0.0021302	467.7535569061184	56.604	0.71598	56.578	56.421	57.137	-0.026108					38	34	2	0	0	0	0.5393	1	4781	4781		50.025	4.0523	1	436610			13107	2582	9010	9018	15070	15070					0.02659587874143199
GSGLPLFFQF	10	Unmodified	_GSGLPLFFQF_					0	0	0			REV__ENSG00000126603|ENST00000433375|GLIS2	REV__ENSG00000126603|ENST00000433375|GLIS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.305419921875	2	556.792392	1111.57023	-0.090367	-5.0316E-05	0.54889	0.00030562	0.45852	0.0002553	557.2941960624911	74.342	0.48547	74.901	74.717	75.202	0.55891					14	11	2	0	0	0	0.37624	1	8449	8449		39.253	19.256	1	66166	+		13108	18707	9011	9019	15071	15071					0.01890930965669213
GSGLTPHVRLM	11	Unmodified	_GSGLTPHVRLM_					0	0	0			REV__ENSG00000134398|ENST00000256797|ERN2	REV__ENSG00000134398|ENST00000256797|ERN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.8404541015625	2	584.318783	1166.62301	0.62973	0.00036796	-0.057993	-3.3886E-05	0.57174	0.00033408	584.3186306407855	50.98	0.57174	51.732	51.366	51.938	0.75174					19	13	2	0	0	0	0.17347	1	5078	5078		44.377	9.2252	1	280980	+		13109	19140	9012	9020	15072	15072					0.046365657568230745
GSGPCGGG	8	Unmodified	_GSGPCGGG_					0	0	0		ENST00000307741.10_1_19:2813607-2814732:+|nuORF	REV__ENSG00000099625|ENST00000650044|CBARP;ENST00000307741.10_1_19:2813607-2814732:+|nuORF	REV__ENSG00000099625|ENST00000650044|CBARP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.3030395507812	1	591.219137	590.21186	-0.057927	-3.4247E-05	-0.98667	-0.00058334	-1.0446	-0.00061759	591.2182734226826	52.954	0.69875	52.93	52.54	53.239	-0.023849					24	17	2	0	0	0	0.4196	1	4655	4655		8.8223	4.1406	1	83044			13110	17098;9876	9013	9021	15073	15073					-0.09963741162027873
GSGPLLVLI	9	Unmodified	_GSGPLLVLI_					0	0	0		ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7795104980469	2	434.778754	867.542954	0.20501	8.9135E-05	2.1081	0.00091654	2.3131	0.0010057	434.77952396468385	43.343	2.099	43.316	42.291	44.39	-0.026768					151	50	4	0	0	0	0.76402	1	3368	3368		35.201	3.2459	1	2133200			13111	11147	9014	9022	15074	15074					0.10388447425293634
GSGPLLVLI	9	Unmodified	_GSGPLLVLI_					0	0	0		ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.779541015625	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.01	1	55.002	54.502	55.502	-0.0077095								0	0	0	0.29103	1	4878	4878		40.573	0	1				13112	11147	9014	9022	15075	15075					0.10388447425293634
GSGPLLVLI	9	Unmodified	_GSGPLLVLI_					0	0	0		ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7803955078125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.623	1	55.613	55.113	56.113	-0.010136								0	0	0	0.31472	1	4963	4963		25.45	0	1				13113	11147	9014	9022	15076	15076					0.10388447425293634
GSGPLLVLI	9	Unmodified	_GSGPLLVLI_					0	0	0		ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78009033203125	2	434.778754	867.542954	-0.47801	-0.00020783	4.1901	0.0018218	3.7121	0.0016139	434.78031491435894	33.573	1.1529	33.517	32.851	34.004	-0.056385					70	27	4	0	0	0	0.77546	1	2067	2067		31.955	0	1	421000			13114	11147	9014	9022	15077	15077					0.10388447425293634
GSGPLLVLI	9	Unmodified	_GSGPLLVLI_					0	0	0		ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7789306640625	2	434.778754	867.542954	-0.81007	-0.0003522	3.4341	0.0014931	2.624	0.0011409	434.7801064754335	48.077	2.7534	48.052	47.541	50.295	-0.025112					179	68	4	0	0	0	0.7932	1	3990	3990		18.324	0	1	1940000			13115	11147	9014	9022	15078	15078					0.10388447425293634
GSGPLLVLI	9	Unmodified	_GSGPLLVLI_					0	0	0		ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78009033203125	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.77546	1	2139	2139		31.955	0	1	4737100			13116	11147	9014	9022	15079	15079					0.10388447425293634
GSGPLLVLI	9	Unmodified	_GSGPLLVLI_					0	0	0		ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77996826171875	2	434.778754	867.542954	0.17139	7.4517E-05	3.201	0.0013917	3.3724	0.0014663	434.7800235008866	37.854	1.477	37.948	37.639	39.116	0.094318					162	48	4	0	0	0	0.7932	1	2281	2281		19.36	0	1	2203700			13117	11147	9014	9022	15080	15080					0.10388447425293634
GSGPLLVLI	9	Unmodified	_GSGPLLVLI_					0	0	0		ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7797546386719	2	434.778754	867.542954	-0.29603	-0.00012871	3.1388	0.0013647	2.8428	0.001236	434.77998100939635	44.91	1.6932	44.842	44.077	45.77	-0.068634					139	41	4	0	0	0	0.7932	1	3224	3224		26.796	0	1	1190800			13118	11147	9014	9022	15081	15081					0.10388447425293634
GSGPLLVLI	9	Unmodified	_GSGPLLVLI_					0	0	0		ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	ENST00000397426.5_1_22:32871348-32874993:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7809753417969	2	434.778754	867.542954	-0.97799	-0.00042521	2.2819	0.00099211	1.3039	0.0005669	434.7796012796187	43.693	1.006	44.143	43.436	44.442	0.45024					66	24	3	0	0	0	0.7932	1	3939	3939		25.45	0	1	2290300			13119	11147	9014	9022	15082	15082					0.10388447425293634
GSGPLPSPEH	10	Unmodified	_GSGPLPSPEH_					0	0	0		ENST00000398958.6_1_1:28864579-28864879:+|nuORF	ENST00000398958.6_1_1:28864579-28864879:+|nuORF	ENST00000398958.6_1_1:28864579-28864879:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.23675537109375	2	489.237981	976.461409	-0.72549	-0.00035494	-2.4583	-0.0012027	-3.1838	-0.0015576	489.23682827265793	62.903	2.2218	63.017	62.721	64.943	0.11388					298	98	5	0	0	0	0.77314	1	5581	5581		40.778	5.1599	1	3506900			13120	11196	9015	9023	15083	15083					-0.02776280004616183
GSGQETSPHA	10	Unmodified	_GSGQETSPHA_					0	0	0			REV__ENST00000427581.6_1_19:55142469-55142978:+|nuORF	REV__ENST00000427581.6_1_19:55142469-55142978:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2801208496094	2	485.71487	969.415188	-1.8316	-0.00088965	3.4133	0.0016579	1.5817	0.00076826	485.7161550215908	43.508	0.28064	44.282	44.103	44.384	0.7738					9	6	2	0	0	0	0.37624	1	3932	3932		54.776	13.998	1	248610	+		13121	26567	9016	9024	15084	15084					-0.07074344906709484
GSGRALVRGP	10	Unmodified	_GSGRALVRGP_					0	0	0			REV__ENST00000390656.8_1_5:169931256-169931394:+|nuORF	REV__ENST00000390656.8_1_5:169931256-169931394:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2843933105469	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.586	1	74.718	74.218	75.218	0.13208								0	0	0	0.45132	1	6905	6905		30.318	0	1		+		13122	26001	9017	9025	15085	15085					0.06602814114478406
GSGRAVAW	8	Unmodified	_GSGRAVAW_					0	0	0			REV__ENST00000599193.5_1_19:58963019-58965066:+|nuORF	REV__ENST00000599193.5_1_19:58963019-58965066:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.21258544921875	2	402.211569	802.408586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.997	1	67.049	66.549	67.549	0.052368								0	0	0	0.29452	1	5952	5952		33.516	6.8227	1		+		13123	29294	9018	9026	15086	15086					-0.0005219327676968533
GSGRAVLGPN	10	Unmodified	_GSGRAVLGPN_					0	0	0		nc|ENSG00000198221|Q9Y6Z5-2|AFDN-DT;nc|ENSG00000198221|Q9Y6Z5|AFDN-DT	nc|ENSG00000198221|Q9Y6Z5-2|AFDN-DT	nc|ENSG00000198221|Q9Y6Z5-2|AFDN-DT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25390625	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.57924	1	8242	8242		51.193	3.2332	1	1603800			13124	15197	9019	9027	15087	15087					0.027191324691784757
GSGRAVLGPN	10	Unmodified	_GSGRAVLGPN_					0	0	0		nc|ENSG00000198221|Q9Y6Z5-2|AFDN-DT;nc|ENSG00000198221|Q9Y6Z5|AFDN-DT	nc|ENSG00000198221|Q9Y6Z5-2|AFDN-DT	nc|ENSG00000198221|Q9Y6Z5-2|AFDN-DT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2530822753906	2	464.253966	926.493378	-1.5107	-0.00070134	1.5188	0.00070511	0.0081105	3.7654E-06	464.25458148678484	81.557	1.8994	81.671	80.874	82.774	0.11426					117	44	3	0	0	0	0.8545	1	7710	7710		36.447	3.6343	1	403390			13125	15197	9019	9027	15088	15088					0.027191324691784757
GSGRLEVKK	9	Unmodified	_GSGRLEVKK_					0	0	0			REV__nc|ENSG00000029534|P16157-16|ANK1	REV__nc|ENSG00000029534|P16157-16|ANK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	488.7779846191406	2	487.293091	972.571629	-0.83121	-0.00040504	0.72567	0.00035361	-0.10554	-5.1428E-05	487.2933413180339	21.31	1.5119	21.355	20.763	22.275	0.045399					160	73	4	0	0	0	0.76255	1	560	560		35.618	5.1146	1	2368300	+		13126	29681	9020	9028	15089	15089					0.08424565054428967
GSGRYGPRY	9	Unmodified	_GSGRYGPRY_					0	0	0		nc|ENSG00000164318|Q63HQ2|EGFLAM;ENSG00000164318|ENST00000322350|EGFLAM;nc|ENSG00000164318|Q63HQ2-4|EGFLAM	nc|ENSG00000164318|Q63HQ2|EGFLAM	nc|ENSG00000164318|Q63HQ2|EGFLAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.7520446777344	2	506.75159	1011.48863	3.6378	0.0018435	-0.63074	-0.00031963	3.0071	0.0015239	506.75081779142084	102.19	0.67956	102.49	102.22	102.9	0.29864					32	15	3	0	0	0	0.69624	1	12465	12465		40.778	6.6056	1	713010			13127	5954	9021	9029	15090	15090					-0.016657516735790523
GSGSGHQGH	9	Unmodified	_GSGSGHQGH_					0	0	0			REV__ENSG00000197915|ENST00000368801|HRNR	REV__ENSG00000197915|ENST00000368801|HRNR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.17572021484375	2	412.175715	822.336878	-1.8024	-0.00074289	1.3357	0.00055053	-0.46669	-0.00019236	412.1764055196895	94.607	2.9265	94.838	94.324	97.25	0.23103					168	69	5	0	0	0	0.78983	1	9721	9721		27.882	1.0861	1	14636000	+	+	13128	16027	9022	9030	15091	15091					-0.0813973270128372
GSGSGHQGH	9	Unmodified	_GSGSGHQGH_					0	0	0			REV__ENSG00000197915|ENST00000368801|HRNR	REV__ENSG00000197915|ENST00000368801|HRNR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.1756591796875	2	412.175715	822.336878	-1.9151	-0.00078935	1.0472	0.00043162	-0.86789	-0.00035773	412.1764543351216	94.772	2.5614	94.974	94.403	96.965	0.20242					141	60	6	0	0	0	0.7932	1	9632	9632		23.042	0.0057756	1	13873000	+	+	13129	16027	9022	9030	15092	15092					-0.0813973270128372
GSGTHKRIL	9	Unmodified	_GSGTHKRIL_					0	0	0			REV__ENSG00000236334|ENST00000419275|PPIAL4G	REV__ENSG00000236334|ENST00000419275|PPIAL4G	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.2865905761719	2	484.785433	967.556313	-2.6464	-0.0012829	3.5931	0.0017419	0.94673	0.00045896	484.78861378184325	41.582	2.0114	41.585	40.8	42.811	0.0034142					135	50	4	0	0	0	0.64922	1	3066	3066		44.117	5.0953	1	1266400	+		13130	23790	9023	9031	15093	15093					0.07123698257237265
GSGVAILTGAH	11	Unmodified	_GSGVAILTGAH_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957458496094	2	491.769448	981.524344	0.33235	0.00016344	1.344	0.00066092	1.6763	0.00082436	491.76979024885884	49.495	0.11621	49.537	49.479	49.595	0.042236					4	2	2	0	0	0	0.17359	1	3833	3833		19.997	3.5236	1	36935			13131	8651	9024	9032	15094	15094					0.03284285783422547
GSGVKVPRN	9	Unmodified	_GSGVKVPRN_					0	0	0		ENST00000490289.5_1_20:48711880-48729665:-|nuORF;ENST00000470565.5_1_20:48713044-48729665:-|nuORF;nc|ENSG00000244687|Q13404-8|UBE2V1;ENST00000397758.2_1_3:175436135-175436456:-|nuORF;ENSG00000244687|ENST00000371674|UBE2V1;ENST00000467839.5_1_20:48700476-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2614440917969	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.76764	1	7405	7405		34.173	2.2177	1	1262800			13132	12667	9025	9033	15095	15095					0.05435722848858404
GSGVQHNN	8	Unmodified	_GSGVQHNN_					0	0	0			REV__ENSG00000130340|ENST00000392185|SNX9	REV__ENSG00000130340|ENST00000392185|SNX9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78521728515625	2	406.685916	811.357279	2.739	0.0011139	1.9191	0.00078048	4.6581	0.0018944	406.6870428604041	29.598	0.13969	29.583	29.524	29.663	-0.015167					6	4	2	0	0	0	0.4196	1	1494	1494		21.96	0	1	9134.7	+		13133	18868	9026	9034	15096	15096					-0.05594562041471818
GSHPPVEALD	10	Unmodified	_GSHPPVEALD_					0	0	0		ENST00000580948.1_1_17:70416883-70417330:-|nuORF	ENST00000580948.1_1_17:70416883-70417330:-|nuORF	ENST00000580948.1_1_17:70416883-70417330:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.25048828125	2	511.251089	1020.48762	0.81116	0.00041471	-1.1298	-0.0005776	-0.31861	-0.00016289	511.25012499783696	18.653	0.28097	18.176	18.03	18.311	-0.47694					8	5	2	0	0	0	0.86218	1	421	421		32.812	7.2384	1	35917			13134	14102	9027	9035	15097	15097					-0.021800108331490264
GSIEREGVLW	10	Unmodified	_GSIEREGVLW_					0	0	0			REV__nc|ENSG00000176884|Q05586-2|GRIN1	REV__nc|ENSG00000176884|Q05586-2|GRIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.3037719726562	2	573.301113	1144.58767	-1.0633	-0.00060957	1.5071	0.000864	0.44381	0.00025444	573.3019114638097	72.702	0.59371	72.739	72.478	73.072	0.037148					37	21	2	0	0	0	0.51302	1	6924	6924		54.776	1.4249	1	225340	+		13135	22149	9028	9036	15098	15098					0.021162265006751113
GSIGLLKK	8	Unmodified	_GSIGLLKK_					0	0	0			REV__ENST00000460235.1_1_2:240024358-240029778:-|nuORF	REV__ENST00000460235.1_1_2:240024358-240029778:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.2712097167969	2	408.271096	814.527639	0.16929	6.9115E-05	0.14041	5.7326E-05	0.3097	0.00012644	408.2710207965561	28.948	0.81922	28.919	28.61	29.429	-0.029207					41	18	3	0	0	0	0.3622	2	1791	1779;1791		101.21	21.272	1	1001700	+		13136	26998	9029	9037	15099;15100	15100					0.11295580628075186
GSIGLLKK	8	Unmodified	_GSIGLLKK_					0	0	0			REV__ENST00000460235.1_1_2:240024358-240029778:-|nuORF	REV__ENST00000460235.1_1_2:240024358-240029778:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	408.271096	814.527639	0.16929	6.9115E-05	0.14041	5.7326E-05	0.3097	0.00012644	408.2710207965561	28.948	0.81922	28.919	28.61	29.429	-0.029207	-0.017981	0.00017683	NaN	101.21	41	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1001700	+		13137	26998	9029	9037							0.11295580628075186
GSIGLLKK	8	Unmodified	_GSIGLLKK_					0	0	0			REV__ENST00000460235.1_1_2:240024358-240029778:-|nuORF	REV__ENST00000460235.1_1_2:240024358-240029778:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	408.271096	814.527639	0.55277	0.00022568	-0.26667	-0.00010887	0.2861	0.00011681	408.27086164500804	29.128	0.98776	28.955	28.547	29.535	-0.17336	0.017981	-0.00015557	NaN	101.21	46	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1086600	+		13138	26998	9029	9037							0.11295580628075186
GSIIAKILAGY	11	Unmodified	_GSIIAKILAGY_					0	0	0		nc|ENSG00000167968|Q92874-2|DNASE1L2;ENSG00000167968|ENST00000320700|DNASE1L2	nc|ENSG00000167968|Q92874-2|DNASE1L2	nc|ENSG00000167968|Q92874-2|DNASE1L2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3329467773438	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.48529	1	9799	9799		52.937	16.49	1	2365500			13139	6344	9030	9038	15101	15101					0.10615462062582992
GSIIAKILAGY	11	Unmodified	_GSIIAKILAGY_					0	0	0		nc|ENSG00000167968|Q92874-2|DNASE1L2;ENSG00000167968|ENST00000320700|DNASE1L2	nc|ENSG00000167968|Q92874-2|DNASE1L2	nc|ENSG00000167968|Q92874-2|DNASE1L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3327026367188	2	553.334424	1104.6543	-0.75754	-0.00041917	-2.8743	-0.0015905	-3.6319	-0.0020096	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.7144	1	10186	10186		29.17	0.020503	1	4355400			13140	6344	9030	9038	15102	15102					0.10615462062582992
GSILCNGRKR	10	Unmodified	_GSILCNGRKR_					0	0	0		ENST00000537098.7_1_16:81641283-81685835:+|nuORF	ENST00000537098.7_1_16:81641283-81685835:+|nuORF	ENST00000537098.7_1_16:81641283-81685835:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3056030273438	2	552.308749	1102.60295	-1.4446	-0.00079788	-2.6511	-0.0014642	-4.0957	-0.0022621	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.86218	1	9396	9396		32.812	2.4947	1	1677300			13141	13448	9031	9039	15103	15103					0.05574814816873186
GSILVLLWAVH	11	Unmodified	_GSILVLLWAVH_					0	0	0			REV__nc|ENSG00000107736|Q9H251-5|CDH23;REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3668212890625	2	604.363516	1206.71248	0.90474	0.00054679	3.9121	0.0023643	4.8168	0.0029111	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.732	1	11522	11522		10.866	0	1	105740000	+		13142	17672;29767	9032	9040	15104	15104					0.11739143707836774
GSINKLAL	8	Unmodified	_GSINKLAL_					0	0	0			REV__nc|ENSG00000052841|Q96AE7-2|TTC17	REV__nc|ENSG00000052841|Q96AE7-2|TTC17	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7393798828125	2	408.252903	814.491253	-0.096607	-3.944E-05	3.3937	0.0013855	3.2971	0.001346	408.2542453494895	36.66	0.40911	36.599	36.365	36.774	-0.060333					16	12	2	0	0	0	0.4196	1	2028	2028		20.947	3.582	1	26755	+		13143	16385	9033	9041	15105	15105					0.07658703731362948
GSISTYVQTL	10	Unmodified	_GSISTYVQTL_					0	0	0			REV__ENST00000461927.1_1_10:97599427-97599544:+|nuORF	REV__ENST00000461927.1_1_10:97599427-97599544:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.7822265625	2	534.782222	1067.54989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.881	1	39.436	38.936	39.936	0.55449								0	0	0	0.45132	1	3242	3242		35.152	1.6364	1		+		13144	27039	9034	9042	15106	15106					0.01881715515196447
GSKPNVLVLLP	11	Unmodified	_GSKPNVLVLLP_					0	0	0			REV__ENST00000480809.5_1_3:185925300-186038248:-|nuORF	REV__ENST00000480809.5_1_3:185925300-186038248:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8538818359375	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.70737	1	10671	10671		30.318	2.4355	1	34546000	+		13145	16442	9035	9043	15107	15107					0.1340743747093711
GSKRKSIFSKK	11	Unmodified	_GSKRKSIFSKK_					0	0	0			REV__ENST00000242719.3_1_1:51738308-51738467:+|nuORF	REV__ENST00000242719.3_1_1:51738308-51738467:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2272033691406	3	422.594461	1264.76155	-0.16567	-7.0011E-05	-4.2769	-0.0018074	-4.4425	-0.0018774	422.5925259842464	56.998	1.611	56.986	56.609	58.22	-0.012203					120	57	3	0	0	0	0.1767	1	5086	5086		18.531	7.4343	1	338630	+		13146	24232	9036	9044	15108	15108					0.13976431996798055
GSKSTIKKIN	10	Unmodified	_GSKSTIKKIN_					0	0	0		ENSG00000183273|ENST00000327554|CCDC60	ENSG00000183273|ENST00000327554|CCDC60	ENSG00000183273|ENST00000327554|CCDC60	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3264770507812	2	538.327131	1074.63971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.52	1	113.49	112.99	113.99	-0.024811								0	0	0	0.45132	1	12560	12560		20.947	0.4651	1				13147	7515	9037	9045	15109	15109					0.10537389914429696
GSLKLLPP	8	Unmodified	_GSLKLLPP_					0	0	0		nc|ENSG00000205307|Q8TEE9|SAP25;ENSG00000205307|ENST00000622764|SAP25	nc|ENSG00000205307|Q8TEE9|SAP25	nc|ENSG00000205307|Q8TEE9|SAP25	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7672119140625	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.884	1	2594	2594		33.516	3.674	1	795210			13148	8523	9038	9046	15110	15110					0.09792178253815109
GSLKLLPP	8	Unmodified	_GSLKLLPP_					0	0	0		nc|ENSG00000205307|Q8TEE9|SAP25;ENSG00000205307|ENST00000622764|SAP25	nc|ENSG00000205307|Q8TEE9|SAP25	nc|ENSG00000205307|Q8TEE9|SAP25	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7659606933594	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.857	1	40.826	40.326	41.326	-0.030991								0	0	0	0.29344	1	2941	2941		31.955	5.1588	1				13149	8523	9038	9046	15111	15111					0.09792178253815109
GSLKLLPP	8	Unmodified	_GSLKLLPP_					0	0	0		nc|ENSG00000205307|Q8TEE9|SAP25;ENSG00000205307|ENST00000622764|SAP25	nc|ENSG00000205307|Q8TEE9|SAP25	nc|ENSG00000205307|Q8TEE9|SAP25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2667236328125	2	412.765646	823.516739	-1.8859	-0.00077844	3.9578	0.0016337	2.0719	0.00085522	412.7678129581843	48.855	3.3742	48.881	47.541	50.915	0.025574					176	94	2	0	0	0	0.8347	1	3617	3617		23.042	1.3402	1	621000			13150	8523	9038	9046	15112	15112					0.09792178253815109
GSLKLLPP	8	Unmodified	_GSLKLLPP_					0	0	0		nc|ENSG00000205307|Q8TEE9|SAP25;ENSG00000205307|ENST00000622764|SAP25	nc|ENSG00000205307|Q8TEE9|SAP25	nc|ENSG00000205307|Q8TEE9|SAP25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76708984375	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.88915	1	2172	2172		35.201	5.3592	1	1619400			13151	8523	9038	9046	15113	15113					0.09792178253815109
GSLKLVAST	9	Unmodified	_GSLKLVAST_					0	0	0			REV__nc|ENSG00000130714|Q9Y6A1-4|POMT1	REV__nc|ENSG00000130714|Q9Y6A1-4|POMT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2634582519531	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.7932	1	2388	2388		14.865	0.20078	1	3507500	+		13152	18898	9039	9047	15114	15114					0.07010669040232642
GSLKPLLP	8	Unmodified	_GSLKPLLP_					0	0	0		ENST00000435508.6_3_3:49507816-49547930:+|nuORF	ENST00000435508.6_3_3:49507816-49547930:+|nuORF	ENST00000435508.6_3_3:49507816-49547930:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2674560546875	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.87479	1	2951	2951		30.504	0	1	681490			13153	11711	9040	9048	15115	15115					0.09792178253815109
GSLLAVQH	8	Unmodified	_GSLLAVQH_					0	0	0			REV__ENST00000569319.5_1_16:70399881-70405886:+|nuORF	REV__ENST00000569319.5_1_16:70399881-70405886:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7669372558594	2	412.734877	823.455202	1.3724	0.00056643	-0.50927	-0.00021019	0.86311	0.00035624	412.7344983667474	36.529	0.45135	36.97	36.786	37.238	0.44043					14	10	2	0	0	0	0.4196	1	2889	2889		24.203	17.009	1	62305	+		13154	20541	9041	9049	15116	15116					0.036412465545254236
GSLLVLIQHL	10	Unmodified	_GSLLVLIQHL_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8402099609375	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.4892	2	10465	10465;10570		56.721	1.9447	1	44929000	+		13155	17426	9042	9050	15117;15118	15117					0.12811168299458586
GSLNTKLLVEK	11	Unmodified	_GSLNTKLLVEK_					0	0	0			REV__nc|ENSG00000100796|Q6IN85-2|PPP4R3A	REV__nc|ENSG00000100796|Q6IN85-2|PPP4R3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2460632324219	3	401.243206	1200.70779	2.0284	0.00081388	2.2941	0.00092049	4.3225	0.0017344	401.24405132963193	20.855	0.89152	20.395	20.053	20.945	-0.4591					60	20	5	0	0	0	0.69687	1	723	723		32.034	1.4653	1	593280	+		13156	17220	9043	9051	15119	15119					0.11546214774398322
GSLPKPIL	8	Unmodified	_GSLPKPIL_					0	0	0		ENSG00000143845|ENST00000367202|ETNK2;nc|ENSG00000143845|Q9NVF9-2|ETNK2	ENSG00000143845|ENST00000367202|ETNK2	ENSG00000143845|ENST00000367202|ETNK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7666931152344	2	412.765646	823.516739	-1.2234	-0.00050499	3.8954	0.0016079	2.6719	0.0011029	412.7673243915212	41.944	1.8566	41.905	41.33	43.186	-0.038223					75	44	2	0	0	0	0.90465	1	3227	3227		40.573	5.3719	1	796850			13157	4667	9044	9052	15120	15120					0.09792178253815109
GSLRAVDIPGL	11	Unmodified	_GSLRAVDIPGL_					0	0	0		nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC	nc|ENSG00000041982|P24821-4|TNC	nc|ENSG00000041982|P24821-4|TNC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3186645507812	2	549.319306	1096.62406	0.85078	0.00046735	-3.9097	-0.0021477	-3.0589	-0.0016803	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.73893	1	10616	10616		24.519	0.31644	1	2023500			13158	934	9045	9053	15121	15121					0.0796110339738334
GSPAGHTSP	9	Unmodified	_GSPAGHTSP_					0	0	0		ENST00000531870.5_1_11:33183268-33211605:+|nuORF	ENST00000531870.5_1_11:33183268-33211605:+|nuORF	ENST00000531870.5_1_11:33183268-33211605:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2945251464844	2	405.690667	809.366781	-1.9216	-0.00077959	2.0646	0.00083761	0.14299	5.8011E-05	405.69126888925865	29.567	0.44466	29.634	29.402	29.846	0.066727					25	19	2	0	0	0	0.20789	1	1246	1246		27.882	0	1	43638			13159	13366	9046	9054	15122	15122					-0.04552793755954099
GSPEALVPGPP	11	Unmodified	_GSPEALVPGPP_					0	0	0			REV__nc|ENSG00000140939|O60936-3|NOL3	REV__nc|ENSG00000140939|O60936-3|NOL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.77105712890625	2	510.771657	1019.52876	-0.054481	-2.7827E-05	0.37788	0.00019301	0.3234	0.00016518	510.77161955919803	71.85	0.62404	71.887	71.636	72.26	0.037148					45	23	3	0	0	0	0.7342	1	6807	6807		25.574	1.0549	1	215000	+		13160	29893	9047	9055	15123	15123					0.019777502063448082
GSPGFTRS	8	Unmodified	_GSPGFTRS_					0	0	0			REV__ENSG00000275023|ENST00000621332|MLLT6	REV__ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5890808105469	2	404.701035	807.387516	0.79411	0.00032138	-0.53806	-0.00021775	0.25605	0.00010363	404.70090047704826	38.994	1.2008	39.005	38.402	39.602	0.011173					34	27	2	0	0	0	0.4196	1	2750	2750		25.574	19.261	1	42822	+		13161	24007	9048	9056	15124	15124					-0.023882033762788524
GSPGPVPRL	9	Unmodified	_GSPGPVPRL_					0	0	0		nc|ENSG00000198910|P32004-3|L1CAM;nc|ENSG00000198910|P32004-2|L1CAM;ENSG00000198910|ENST00000370060|L1CAM	nc|ENSG00000198910|P32004-3|L1CAM	nc|ENSG00000198910|P32004-3|L1CAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25579833984375	2	440.255977	878.497401	-0.8618	-0.00037941	-0.60853	-0.00026791	-1.4703	-0.00064732	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.7932	1	6916	6916		23.042	2.5607	1	1365500			13162	8365	9049	9057	15125	15125					0.05329221962904285
GSPQTSSLLPA	11	Unmodified	_GSPQTSSLLPA_					0	0	0			REV__ENST00000333219.8_1_13:111366016-111366232:+|nuORF	REV__ENST00000333219.8_1_13:111366016-111366232:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.3848876953125	2	529.279846	1056.54514	-0.13781	-7.2941E-05	3.2876	0.0017401	3.1498	0.0016671	529.2812279305515	28.36	0.15651	28.263	28.184	28.34	-0.096945					5	3	2	0	0	0	0.16388	1	1696	1696		23.523	0	1	17785	+		13163	25147	9050	9058	15126	15126					0.019128313724195323
GSPSPLSSRRR	11	Unmodified	_GSPSPLSSRRR_					0	0	0		ENST00000527224.1_1_11:65837982-65838258:+|nuORF	ENST00000527224.1_1_11:65837982-65838258:+|nuORF	ENST00000527224.1_1_11:65837982-65838258:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	600.3370971679688	2	600.33381	1198.65307	0.14163	8.5026E-05	0.048717	2.9246E-05	0.19035	0.00011427	600.333887960337	19.56	0.38957	19.487	19.3	19.69	-0.073704					14	10	2	0	0	0	0.68532	1	437	437		33.922	4.7516	1	34586			13164	13277	9051	9059	15127	15127					0.061686407463639625
GSPSPLSSRRR	11	Unmodified	_GSPSPLSSRRR_					0	0	0		ENST00000527224.1_1_11:65837982-65838258:+|nuORF	ENST00000527224.1_1_11:65837982-65838258:+|nuORF	ENST00000527224.1_1_11:65837982-65838258:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	600.33381	1198.65307	0.56346	0.00033827	-0.47782	-0.00028685	0.085641	5.1413E-05	600.333112305304	19.211	0.33591	19.285	19.118	19.454	0.073465	-0.10107	-0.00043491	NaN	33.922	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33257			13165	13277	9051	9059							0.061686407463639625
GSQKPNGPGYK	11	Unmodified	_GSQKPNGPGYK_					0	0	0			REV__ENSG00000255408|ENST00000522353|PCDHA3;REV__ENSG00000204969|ENST00000526136|PCDHA2;REV__ENSG00000204967|ENST00000530339|PCDHA4;REV__ENSG00000250120|ENST00000307360|PCDHA10	REV__ENSG00000250120|ENST00000307360|PCDHA10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.7913818359375	2	566.790912	1131.56727	0.96166	0.00054506	-0.86131	-0.00048818	0.10035	5.6876E-05	566.7903425607038	21.672	0.75555	21.229	20.961	21.716	-0.44324					46	17	4	0	0	0	0.70737	1	818	818		30.318	0	1	466070	+		13166	23869;23899;23533;23532	9052	9060	15128	15128					0.006750558408384677
GSRAKPVVSD	10	Unmodified	_GSRAKPVVSD_					0	0	0		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF	nc|ENSG00000127616|P51532-5|SMARCA4	nc|ENSG00000127616|P51532-5|SMARCA4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2799072265625	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.82886	1	8696	8696		37.812	0	1	1261800			13167	3511	9053	9061	15129	15129					0.03911670812135526
GSRAKPVVSD	10	Unmodified	_GSRAKPVVSD_					0	0	0		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF	nc|ENSG00000127616|P51532-5|SMARCA4	nc|ENSG00000127616|P51532-5|SMARCA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2796325683594	2	508.28018	1014.54581	-0.38512	-0.00019575	0.39831	0.00020245	0.013195	6.7066E-06	508.28029410514995	88.272	2.579	88.735	87.686	90.265	0.46312					198	63	4	0	0	0	0.66675	1	10358	10358		46.457	5.6786	1	2008000			13168	3511	9053	9061	15130	15130					0.03911670812135526
GSRASAKK	8	Unmodified	_GSRASAKK_					0	0	0			REV__nc|ENSG00000138376|Q99728-3|BARD1	REV__nc|ENSG00000138376|Q99728-3|BARD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.7364807128906	2	402.737951	803.46135	-1.2942	-0.00052123	-0.2479	-9.9837E-05	-1.5421	-0.00062107	402.7378412097274	41.115	1.577	41.074	40.693	42.27	-0.04081					69	41	3	0	0	0	0.80308	1	3069	3069		16.473	0.83134	1	1005100	+		13169	19464	9054	9062	15131	15131					0.05175764786031323
GSRGGGGG	8	Unmodified	_GSRGGGGG_					0	0	0		ENSG00000167768|ENST00000252244|KRT1;CON__P04264;ENST00000342160.7_2_X:53707007-53711004:-|nuORF;CON__Q6IFZ6;ENSG00000174279|ENST00000308618|EVX2	ENSG00000167768|ENST00000252244|KRT1;ENSG00000174279|ENST00000308618|EVX2	ENSG00000167768|ENST00000252244|KRT1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3662719726562	1	604.279763	603.272486	-0.48735	-0.0002945	-2.7119	-0.0016388	-3.1993	-0.0019333	604.2773802135566	104.85	0.87237	104.84	104.32	105.2	-0.014809					25	20	2	0	0	0	0.4196	1	11355	11355		15.642	0	1	62050		+	13170	587;6922	9055	9063	15132	15132					-0.04501887787432679
GSRHFHVIQWK	11	Unmodified	_GSRHFHVIQWK_					0	0	0			REV__ENST00000351010.6_1_5:149602275-149624861:-|nuORF	REV__ENST00000351010.6_1_5:149602275-149624861:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.58453369140625	3	465.586189	1393.73674	0.030923	1.4397E-05	-4.1839	-0.0019479	-4.1529	-0.0019335	465.5842632332639	38.599	0.68763	38.546	38.113	38.8	-0.052727					38	20	3	0	0	0	0.75121	1	2308	2308		21.78	2.8141	1	151350	+		13171	16615	9056	9064	15133	15133					0.055617969140712376
GSRIITVLKPR	11	Unmodified	_GSRIITVLKPR_					0	0	0			REV__nc|ENSG00000077279|O43602-2|DCX;REV__ENSG00000133083|ENST00000360631|DCLK1	REV__nc|ENSG00000077279|O43602-2|DCX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.9335021972656	3	413.934706	1238.78229	-0.30792	-0.00012746	-4.4381	-0.0018371	-4.746	-0.0019645	413.9329171146817	43.07	1.6523	43.019	41.913	43.565	-0.050308					85	44	2	0	0	0	0.78351	1	2906	2906		14.779	1.2709	1	357350	+		13172	16744;19055	9057	9065	15134	15134					0.1724502237645993
GSRLLERTG	9	Unmodified	_GSRLLERTG_					0	0	0		ENST00000525503.5_1_11:82996703-82996883:-|nuORF	ENST00000525503.5_1_11:82996703-82996883:-|nuORF	ENST00000525503.5_1_11:82996703-82996883:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7801818847656	2	494.780348	987.546142	-0.60063	-0.00029718	0.65872	0.00032592	0.05809	2.8742E-05	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.76255	1	8474	8474		35.618	1.6967	1	707910			13173	13238	9058	9066	15135	15135					0.05187090532001548
GSRRAARLP	9	Unmodified	_GSRRAARLP_					0	0	0		ENST00000567120.5_1_16:734232-734409:-|nuORF	ENST00000567120.5_1_16:734232-734409:-|nuORF	ENST00000567120.5_1_16:734232-734409:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.30029296875	2	492.296499	982.578445	-2.6009	-0.0012804	2.7977	0.0013773	0.1968	9.6885E-05	492.2976519406636	59.452	0.77537	59.484	59.176	59.951	0.032822					30	18	2	0	0	0	0.78536	1	5462	5462		29.15	1.2673	1	59401			13174	13947	9059	9067	15136	15136					0.08645922725645505
GSRRGCGL	8	Unmodified	_GSRRGCGL_					0	0	0		ENST00000455579.2_1_2:5836389-5847270:+|nuORF	ENST00000455579.2_1_2:5836389-5847270:+|nuORF	ENST00000455579.2_1_2:5836389-5847270:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2086181640625	2	403.208504	804.402455	-1.8186	-0.00073328	3.062	0.0012346	1.2433	0.00050133	403.20969687299277	85.674	2.1245	85.86	85.144	87.269	0.18523					94	49	3	0	0	0	0.87479	1	8431	8431		30.504	0	1	1250400			13175	11953	9060	9068	15137	15137					-0.007570347799287447
GSRRPGPV	8	Unmodified	_GSRRPGPV_					0	0	0			REV__ENSG00000125304|ENST00000376387|TM9SF2	REV__ENSG00000125304|ENST00000376387|TM9SF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.23828125	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.8347	1	7171	7171		23.042	1.0826	1	2012200	+		13176	18633	9061	9069	15138	15138					0.04243184505901354
GSRRPGVP	8	Unmodified	_GSRRPGVP_					0	0	0		ENST00000502974.1_1_4:74904133-74904340:-|nuORF	ENST00000502974.1_1_4:74904133-74904340:-|nuORF	ENST00000502974.1_1_4:74904133-74904340:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2381286621094	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.89494	1	7496	7496		37.159	0	1	2127000			13177	12872	9062	9070	15139	15139					0.04243184505901354
GSRRVPAGT	9	Unmodified	_GSRRVPAGT_					0	0	0		ENST00000551566.1_1_12:56660746-56661725:+|nuORF;ENST00000551911.5_1_12:56660746-56663089:+|nuORF;ENSG00000135469|ENST00000308197|COQ10A	ENST00000551566.1_1_12:56660746-56661725:+|nuORF	ENST00000551566.1_1_12:56660746-56661725:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7560729980469	2	450.754133	899.493713	-1.264	-0.00056978	1.3912	0.00062708	0.12712	5.7301E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.76764	1	7842	7842		34.173	1.3601	1	414240			13178	4026	9063	9071	15140	15140					0.03994552189033129
GSRSPLAPL	9	Unmodified	_GSRSPLAPL_					0	0	0			REV__ENST00000253814.5_1_5:141488387-141511833:+|nuORF	REV__ENST00000253814.5_1_5:141488387-141511833:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2604064941406	2	449.261259	896.507966	-1.381	-0.00062045	-0.0050338	-2.2615E-06	-1.3861	-0.00062271	449.26107911518943	71.508	1.165	71.892	71.126	72.291	0.38449					61	27	3	0	0	0	0.77696	1	7944	7944		31.53	5.9558	1	1175400	+		13179	24306	9064	9072	15141	15141					0.055572046173210765
GSRSPLAPL	9	Unmodified	_GSRSPLAPL_					0	0	0			REV__ENST00000253814.5_1_5:141488387-141511833:+|nuORF	REV__ENST00000253814.5_1_5:141488387-141511833:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.26031494140625	2	449.261259	896.507966	0.057954	2.6037E-05	-1.3536	-0.00060812	-1.2956	-0.00058208	449.2605008010548	66.1	1.0485	66.652	66.2	67.248	0.5526					65	29	3	0	0	0	0.78528	1	7246	7246		29.17	3.7199	1	957500	+		13180	24306	9064	9072	15142	15142					0.055572046173210765
GSSFLYQLW	9	Unmodified	_GSSFLYQLW_					0	0	0			REV__ENST00000502271.5_1_5:53182250-53182346:-|nuORF	REV__ENST00000502271.5_1_5:53182250-53182346:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.7719116210938	2	550.7742	1099.53385	0.20093	0.00011067	-4.2921	-0.002364	-4.0912	-0.0022533	550.7716334502886	66.287	1.0768	66.252	66.005	67.082	-0.035217					118	49	3	0	0	0	0.47272	1	6360	6360		53.351	2.1588	1	1422100	+		13181	27817	9065	9073	15143	15143					-0.011939459310497114
GSSKRNKVIK	10	Unmodified	_GSSKRNKVIK_					0	0	0		nc|ENSG00000075240|Q6IC98-2|GRAMD4;ENSG00000075240|ENST00000406902|GRAMD4	nc|ENSG00000075240|Q6IC98-2|GRAMD4	nc|ENSG00000075240|Q6IC98-2|GRAMD4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.5137939453125	2	558.846022	1115.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.558	1	60.948	60.448	61.448	0.38945								0	0	0	0.45132	1	6429	6429		19.104	0	1				13182	1327	9066	9074	15144	15144					0.124279008998883
GSSLITKMIL	10	Unmodified	_GSSLITKMIL_					0	0	0			REV__ENST00000335420.9_1_7:129756374-129760615:+|nuORF	REV__ENST00000335420.9_1_7:129756374-129760615:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8170776367188	2	531.81501	1061.61547	1.0296	0.00054754	2.4741	0.0013157	3.5036	0.0018633	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.85694	1	8924	8924		21.96	2.5999	1	1241100	+		13183	25167	9067	9075	15145	15145					0.0871241343654674
GSSLPLLPI	9	Unmodified	_GSSLPLLPI_					0	0	0			REV__chr22:21106245-21115929|22|16.09|0.43|5.21|+|0|TE_info:L1MA6,L1MA6_dup5341,L1,LINE,donor,-,21105750,21106245|None,BCRP2|3	REV__chr22:21106245-21115929|22|16.09|0.43|5.21|+|0|TE_info:L1MA6,L1MA6_dup5341,L1,LINE,donor,-,21105750,21106245|None,BCRP2|3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2608337402344	2	448.776211	895.537869	-0.096145	-4.3148E-05	1.1362	0.00050991	1.0401	0.00046676	448.77658726612935	67.832	0.87591	68.38	68.117	68.993	0.54819					27	20	2	0	0	0	0.20789	1	7490	7490		35.618	11.416	1	105690	+		13184	15788	9068	9076	15146	15146					0.08592143562668753
GSSLPRRAP	9	Unmodified	_GSSLPRRAP_					0	0	0			REV__ENSG00000112031|ENST00000367233|MTRF1L	REV__ENSG00000112031|ENST00000367233|MTRF1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.76873779296875	2	470.769783	939.525013	-0.48992	-0.00023064	-1.8607	-0.00087595	-2.3506	-0.0011066	470.7688881667738	48.682	1.1232	49.586	49.29	50.413	0.90424					66	27	4	0	0	0	0.69624	1	4754	4754		40.778	1.5253	1	20692000	+		13185	17910	9069	9077	15147	15147					0.052831252231385406
GSSPARTVPIL	11	Unmodified	_GSSPARTVPIL_					0	0	0		ENST00000541412.5_1_6:10723221-10723308:+|nuORF	ENST00000541412.5_1_6:10723221-10723308:+|nuORF	ENST00000541412.5_1_6:10723221-10723308:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.3214721679688	2	549.319306	1096.62406	-0.48303	-0.00026534	-2.2746	-0.0012495	-2.7576	-0.0015148	549.3179926126767	101.27	2.2263	101.27	100.73	102.96	0					128	54	4	0	0	0	0.7434	1	10379	10379		23.523	0.48021	1	1196600			13186	13518	9070	9078	15148	15148					0.0796110339738334
GSTLAGFADIL	11	Unmodified	_GSTLAGFADIL_					0	0	0			REV__nc|ENSG00000016602|Q14CN2-2|CLCA4	REV__nc|ENSG00000016602|Q14CN2-2|CLCA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.7874145507812	2	532.784764	1063.55498	1.9083	0.0010167	2.3113	0.0012314	4.2196	0.0022482	532.785779683441	100.65	0.72578	100.95	100.65	101.37	0.2999					34	17	3	0	0	0	0.60058	1	12192	12192		44.377	10.205	1	640410	+		13187	16217	9071	9079	15149	15149					0.025740193777892273
GSTLSPML	8	Unmodified	_GSTLSPML_					0	0	0			REV__ENST00000484326.1_1_7:45143607-45145060:-|nuORF	REV__ENST00000484326.1_1_7:45143607-45145060:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2093811035156	2	403.209847	804.40514	-1.8186	-0.00073328	-0.268	-0.00010806	-2.0866	-0.00084134	403.20969687299277	85.674	2.1245	85.86	85.144	87.269	0.18523					94	49	3	0	0	0	0.884	1	8383	8383		33.516	3.674	1	1250400	+		13188	19300	9072	9080	15150	15150					-0.004886241656436141
GSTRGQDSAV	10	Unmodified	_GSTRGQDSAV_					0	0	0		ENST00000221554.12_1_19:13858648-13862607:+|nuORF	ENST00000221554.12_1_19:13858648-13862607:+|nuORF	ENST00000221554.12_1_19:13858648-13862607:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.23712158203125	2	489.23597	976.457387	-0.72549	-0.00035494	1.6529	0.00080867	0.92742	0.00045373	489.23682827265793	62.903	2.2218	63.017	62.721	64.943	0.11388					298	98	5	0	0	0	0.86587	1	5603	5603		29.17	0.020503	1	3506900			13189	9171	9073	9081	15151	15151					-0.03178369498334632
GSTTGNGDRL	10	Unmodified	_GSTTGNGDRL_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A	REV__ENSG00000153253|ENST00000283254|SCN3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.235595703125	2	489.23597	976.457387	0.49831	0.00024379	0.91822	0.00044922	1.4165	0.00069302	489.2364393796821	68.162	0.65366	68.29	67.963	68.617	0.12838					40	24	2	0	0	0	0.86587	1	6119	6119		29.17	4.0441	1	129000	+		13190	15734	9074	9082	15152	15152					-0.031783694983232635
GSTVFKVVSPL	11	Unmodified	_GSTVFKVVSPL_					0	0	0		ENSG00000101216|ENST00000370077|GMEB2	ENSG00000101216|ENST00000370077|GMEB2	ENSG00000101216|ENST00000370077|GMEB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3303833007812	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.7342	1	9618	9618		25.574	0.44807	1	18558000			13191	1916	9075	9083	15153	15153					0.0881915819995811
GSTVKLKWN	9	Unmodified	_GSTVKLKWN_					0	0	0			REV__ENST00000586719.5_1_19:12883476-12885666:-|nuORF	REV__ENST00000586719.5_1_19:12883476-12885666:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7935180664062	2	516.795466	1031.57638	-0.83709	-0.0004326	-3.0347	-0.0015683	-3.8718	-0.0020009	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.77244	1	8475	8475		32.812	1.2826	1	490270	+		13192	29112	9076	9084	15154	15154					0.06185449197187154
GSTVVGHKL	9	Unmodified	_GSTVVGHKL_					0	0	0			REV__ENSG00000125686|ENST00000300651|MED1	REV__ENSG00000125686|ENST00000300651|MED1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2603759765625	2	449.261259	896.507966	-0.43537	-0.0001956	-1.0183	-0.0004575	-1.4537	-0.00065309	449.26067669224085	66.168	1.0089	66.554	66.153	67.162	0.38581					54	26	3	0	0	0	0.77244	1	7206	7206		32.812	4.5581	1	1011600	+		13193	18658	9077	9085	15155	15155					0.05557204617343814
GSTVVGHKL	9	Unmodified	_GSTVVGHKL_					0	0	0			REV__ENSG00000125686|ENST00000300651|MED1	REV__ENSG00000125686|ENST00000300651|MED1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2596740722656	2	449.261259	896.507966	-0.10987	-4.936E-05	-1.2586	-0.00056544	-1.3685	-0.0006148	449.26053823357574	68.09	1.1232	68.638	68.16	69.283	0.54819					61	26	4	0	0	0	0.77244	1	7469	7469		32.812	7.3622	1	1909000	+		13194	18658	9077	9085	15156	15156					0.05557204617343814
GSTWAARSVFD	11	Unmodified	_GSTWAARSVFD_					0	0	0		nc|ENSG00000004660|Q8N5S9-2|CAMKK1	nc|ENSG00000004660|Q8N5S9-2|CAMKK1	nc|ENSG00000004660|Q8N5S9-2|CAMKK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	599.29638671875	2	598.78837	1195.56219	-0.95348	-0.00057093	-4.1195	-0.0024667	-5.073	-0.0030376	599.2881706845951	51.238	0.45379	51.238	51.099	51.553	0					18	11	2	0	0	0	0.66929	1	4138	4138		36.447	4.8125	1	81045			13195	14730	9078	9086	15157	15157					-0.027772480217890916
GSVLKEKH	8	Unmodified	_GSVLKEKH_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2608642578125	2	449.261259	896.507966	-1.2373	-0.00055589	-0.66295	-0.00029784	-1.9003	-0.00085373	449.2607756731413	72.678	0.71947	72.758	72.438	73.158	0.080032					44	25	2	0	0	0	0.81897	1	6631	6631		20.947	0.95016	1	208410			13196	6039	9079	9087	15158	15158					0.055572046173210765
GSVLKEKH	8	Unmodified	_GSVLKEKH_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2606201171875	2	449.261259	896.507966	0.057954	2.6037E-05	-1.3536	-0.00060812	-1.2956	-0.00058208	449.2605008010548	66.1	1.0485	66.652	66.2	67.248	0.5526					65	29	3	0	0	0	0.8537	1	7201	7201		25.574	1.3713	1	957500			13197	6039	9079	9087	15159	15159					0.055572046173210765
GSVNAFCN	8	Unmodified	_GSVNAFCN_					0	0	0		ENSG00000091136|ENST00000222399|LAMB1	ENSG00000091136|ENST00000222399|LAMB1	ENSG00000091136|ENST00000222399|LAMB1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24847412109375	2	406.173795	810.333038	3.0929	0.0012563	1.7543	0.00071255	4.8472	0.0019688	406.1760553384944	88.56	0.4802	88.61	88.316	88.796	0.050415					17	11	2	0	0	0	0.4196	1	9131	9131		10.866	0	1	38962			13198	1668	9080	9088	15160	15160					-0.07971538519370824
GSVPPRVPA	9	Unmodified	_GSVPPRVPA_					0	0	0			REV__ENST00000272133.3_1_1:224804098-224804761:+|nuORF	REV__ENST00000272133.3_1_1:224804098-224804761:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.25543212890625	2	440.255977	878.497401	0.40701	0.00017919	-1.6183	-0.00071247	-1.2113	-0.00053328	440.25507557275375	63.556	1.6285	64.111	63.598	65.226	0.55449					91	38	4	0	0	0	0.7932	1	6858	6858		20.947	1.587	1	1465000	+		13199	24540	9081	9089	15161	15161					0.05329221962892916
GSVPWKPVIPE	11	Unmodified	_GSVPWKPVIPE_					0	0	0		ENST00000506668.5_1_5:175780428-175786529:-|nuORF;nc|ENSG00000122203|Q96A73-2|KIAA1191;ENSG00000122203|ENST00000298569|KIAA1191	ENST00000506668.5_1_5:175780428-175786529:-|nuORF	ENST00000506668.5_1_5:175780428-175786529:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.5592956542969	3	403.560646	1207.66011	0.70065	0.00028275	-2.2958	-0.0009265	-1.5952	-0.00064374	403.5596050855879	22.48	0.98659	22.545	22.232	23.218	0.064745					76	37	3	0	0	0	0.58516	1	697	697		45.908	14.274	1	100540			13200	3213	9082	9090	15162	15162					0.06458560574219518
GSWPCGAREG	10	Unmodified	_GSWPCGAREG_					0	0	0		ENSG00000143971|ENST00000272342|ETAA1	ENSG00000143971|ENST00000272342|ETAA1	ENSG00000143971|ENST00000272342|ETAA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.22259521484375	2	510.221808	1018.42906	0.8138	0.00041522	1.6499	0.00084184	2.4637	0.0012571	510.2224882601542	88.451	1.4617	88.9	88.27	89.732	0.44893					86	35	4	0	0	0	0.8545	1	10431	10431		36.447	0.82846	1	3535700			13201	4681	9083	9091	15163	15163					-0.07941390679252436
GSYNDFGNYK	10	Unmodified	_GSYNDFGNYK_					0	0	0		ENST00000429216.1_1_2:201928351-201928714:+|nuORF	ENST00000429216.1_1_2:201928351-201928714:+|nuORF	ENST00000429216.1_1_2:201928351-201928714:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.2490844726562	2	582.751453	1163.48835	-0.22161	-0.00012914	-3.0957	-0.001804	-3.3173	-0.0019332	582.7496360096839	23.956	0.59481	23.913	23.696	24.291	-0.043221					23	16	2	0	0	0	0.86471	1	822	822		30.318	1.1682	1	42712			13202	11603	9084	9092	15164	15164					-0.08685216184107958
GSYSSHISSK	10	Unmodified	_GSYSSHISSK_					0	0	0		ENSG00000169554|ENST00000627532|ZEB2;nc|ENSG00000169554|O60315-2|ZEB2	ENSG00000169554|ENST00000627532|ZEB2	ENSG00000169554|ENST00000627532|ZEB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.75537109375	2	526.753995	1051.49344	0.23917	0.00012598	0.031624	1.6658E-05	0.27079	0.00014264	526.7537788081263	20.652	0.69007	20.023	19.718	20.408	-0.62961					37	15	4	0	0	0	0.42897	1	679	679		61.691	23.88	1	149360			13203	6504	9085	9093	15165	15165					-0.030249123214844076
GSYSSHISSK	10	Unmodified	_GSYSSHISSK_					0	0	0		ENSG00000169554|ENST00000627532|ZEB2;nc|ENSG00000169554|O60315-2|ZEB2	ENSG00000169554|ENST00000627532|ZEB2	ENSG00000169554|ENST00000627532|ZEB2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	526.753995	1051.49344	1.25	0.00065843	-1.2697	-0.00066881	-0.019721	-1.0388E-05	526.7531499291971	20.457	0.59324	19.998	19.687	20.28	-0.4591	-0.01225	-0.00042595	NaN	61.691	33	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136960			13204	6504	9085	9093							-0.030249123214844076
GSYVTHETK	9	Unmodified	_GSYVTHETK_					0	0	0		ENST00000552316.1_1_12:120935833-120936010:+|nuORF;ENSG00000264364|ENST00000579991|DYNLL2;ENSG00000088986|ENST00000242577|DYNLL1	ENST00000552316.1_1_12:120935833-120936010:+|nuORF	ENST00000552316.1_1_12:120935833-120936010:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.24981689453125	2	511.251089	1020.48762	0.67589	0.00034555	-0.37473	-0.00019158	0.30116	0.00015397	511.2505308869861	18.86	0.2977	18.23	18.06	18.358	-0.62961					13	6	3	0	0	0	0.71772	1	441	441		39.253	5.0803	1	41779			13205	1601	9086	9094	15166	15166					-0.021800108331376578
GTAAKSITK	9	Unmodified	_GTAAKSITK_					0	0	0		ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.76019287109375	2	438.761092	875.507631	0.2247	9.859E-05	0.15313	6.7187E-05	0.37783	0.00016578	438.76107743991633	16.992	0.61783	16.509	16.373	16.991	-0.48256					26	13	3	0	0	0	0.14236	2	195	195;216		85.161	20.954	1	931580			13206	3880	9087	9095	15167;15168	15167					0.06489784897473783
GTAAKSITK	9	Unmodified	_GTAAKSITK_					0	0	0		ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.76116943359375	2	438.761092	875.507631	0.52424	0.00023001	-0.22615	-9.9224E-05	0.29809	0.00013079	438.76087483839973	17.016	0.75967	16.406	16.213	16.972	-0.6107					35	16	4	0	0	0	4.5757E-05	3	208	198;208;221		150.36	37.951	1	1231200			13207	3880	9087	9095	15169;15170;15171	15170					0.06489784897473783
GTAENGRH	8	Unmodified	_GTAENGRH_					0	0	0		nc|ENSG00000179912|Q9Y2K5|R3HDM2;ENSG00000179912|ENST00000402412|R3HDM2;nc|ENSG00000179912|Q9Y2K5-3|R3HDM2;nc|ENSG00000179912|Q9Y2K5-2|R3HDM2	nc|ENSG00000179912|Q9Y2K5|R3HDM2	nc|ENSG00000179912|Q9Y2K5|R3HDM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.19970703125	2	421.19919	840.383828	2.1086	0.00088814	-2.3115	-0.00097362	-0.20296	-8.5485E-05	421.19828835916894	102.24	0.64627	102.5	102.23	102.88	0.26322					40	15	4	0	0	0	0.89962	3	12395	12395;12404;12416		47.916	8.7928	1	2003800			13208	7302	9088	9096	15172;15173;15174	15172					-0.04274873150143321
GTAENGRH	8	Unmodified	_GTAENGRH_					0	0	0		nc|ENSG00000179912|Q9Y2K5|R3HDM2;ENSG00000179912|ENST00000402412|R3HDM2;nc|ENSG00000179912|Q9Y2K5-3|R3HDM2;nc|ENSG00000179912|Q9Y2K5-2|R3HDM2	nc|ENSG00000179912|Q9Y2K5|R3HDM2	nc|ENSG00000179912|Q9Y2K5|R3HDM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.19921875	2	421.19919	840.383828	2.9358	0.0012366	-2.9533	-0.0012439	-0.017498	-7.3701E-06	421.19797381949434	102.25	0.63708	102.55	102.26	102.9	0.29865					44	14	4	0	0	0	0.91472	1	12461	12461		44.117	3.3386	1	2184700			13209	7302	9088	9096	15175	15175					-0.04274873150143321
GTAGPRVW	8	Unmodified	_GTAGPRVW_					0	0	0		ENSG00000137275|ENST00000259808|RIPK1;nc|ENSG00000137275|Q13546-2|RIPK1	ENSG00000137275|ENST00000259808|RIPK1	ENSG00000137275|ENST00000259808|RIPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2283935546875	2	422.22722	842.439886	-1.8003	-0.00076015	3.6324	0.0015337	1.8321	0.00077356	422.2286994830419	63.649	0.63203	63.769	63.398	64.03	0.12004					57	31	2	0	0	0	0.85277	1	5582	5582		25.45	2.4077	1	224330			13210	4187	9089	9097	15176	15176					0.012363797573243573
GTALACFFGG	10	Unmodified	_GTALACFFGG_					0	0	0		ENST00000326391.6_1_7:44054045-44058742:-|nuORF	ENST00000326391.6_1_7:44054045-44058742:-|nuORF	ENST00000326391.6_1_7:44054045-44058742:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7223205566406	2	472.220746	942.426938	-1.0231	-0.00048314	4.0421	0.0019087	3.0189	0.0014256	472.22256154509336	38.81	0.52143	38.82	38.524	39.046	0.010708					29	15	2	0	0	0	0.86218	1	2306	2306		32.812	2.3088	1	181230			13211	10077	9090	9098	15177	15177					-0.04657819417070641
GTAPWGKR	8	Unmodified	_GTAPWGKR_					0	0	0		ENST00000460725.5_1_2:113955061-113955313:+|nuORF	ENST00000460725.5_1_2:113955061-113955313:+|nuORF	ENST00000460725.5_1_2:113955061-113955313:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.77471923828125	2	436.740494	871.466435	2.1581	0.00094252	1.7114	0.00074746	3.8695	0.00169	436.74022537992914	90.635	0.43371	90.682	90.474	90.908	0.04644					13	10	2	0	0	0	0.4196	1	9407	9407		18.324	0	1	70903			13212	12011	9091	9099	15178	15178					0.025560686486642226
GTARQSRV	8	Unmodified	_GTARQSRV_					0	0	0			REV__nc|ENSG00000205726|Q15811-4|ITSN1	REV__nc|ENSG00000205726|Q15811-4|ITSN1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26202392578125	2	437.746308	873.478063	-0.19968	-8.7411E-05	2.926	0.0012808	2.7263	0.0011934	437.74752526342473	42.535	0.94939	42.49	42.152	43.101	-0.045467					45	27	2	0	0	0	0.4196	1	2914	2914		29.15	3.6994	1	183230	+		13213	23573	9092	9100	15179	15179					0.03626265671994133
GTAVRKHK	8	Unmodified	_GTAVRKHK_					0	0	0		nc|ENSG00000153820|Q2M3C7-2|SPHKAP;ENSG00000153820|ENST00000392056|SPHKAP	nc|ENSG00000153820|Q2M3C7-2|SPHKAP	nc|ENSG00000153820|Q2M3C7-2|SPHKAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.7766418457031	2	448.774868	895.535184	0.23966	0.00010755	4.3231	0.0019401	4.5627	0.0020476	448.77664433620475	43.052	1.972	43.023	42.119	44.091	-0.029465					93	47	3	0	0	0	0.88185	1	3292	3292		32.812	0.85756	1	223720			13214	5244	9093	9101	15180	15180					0.08323732948372253
GTDPTPQHY	9	Unmodified	_GTDPTPQHY_					0	0	0		nc|ENSG00000010810|P06241-3|FYN;nc|ENSG00000010810|P06241-2|FYN;ENSG00000010810|ENST00000354650|FYN;ENST00000521361.5_1_6:112040873-112041254:-|nuORF	nc|ENSG00000010810|P06241-3|FYN	nc|ENSG00000010810|P06241-3|FYN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.2270812988281	2	508.227613	1014.44067	0.32287	0.00016409	-0.44693	-0.00022714	-0.12406	-6.3053E-05	508.2273660195006	29.938	0.79892	29.963	29.615	30.414	0.025013					39	20	3	0	0	0	0.48102	2	1506	1506;1516		52.937	6.9645	1	98491			13215	773	9094	9102	15181;15182	15181					-0.06596870384282738
GTDPTPQHY	9	Unmodified	_GTDPTPQHY_					0	0	0		nc|ENSG00000010810|P06241-3|FYN;nc|ENSG00000010810|P06241-2|FYN;ENSG00000010810|ENST00000354650|FYN;ENST00000521361.5_1_6:112040873-112041254:-|nuORF	nc|ENSG00000010810|P06241-3|FYN	nc|ENSG00000010810|P06241-3|FYN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2275695800781	2	508.227613	1014.44067	-0.081845	-4.1596E-05	-0.037261	-1.8937E-05	-0.11911	-6.0533E-05	508.2275986329524	29.99	0.68885	29.947	29.589	30.278	-0.043095					33	14	3	0	0	0	0.64922	2	1596	1596;1607		44.117	6.7778	1	114440			13216	773	9094	9102	15183;15184	15183					-0.06596870384282738
GTDPTPQHY	9	Unmodified	_GTDPTPQHY_					0	0	0		nc|ENSG00000010810|P06241-3|FYN;nc|ENSG00000010810|P06241-2|FYN;ENSG00000010810|ENST00000354650|FYN;ENST00000521361.5_1_6:112040873-112041254:-|nuORF	nc|ENSG00000010810|P06241-3|FYN	nc|ENSG00000010810|P06241-3|FYN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2278747558594	2	508.227613	1014.44067	-0.14391	-7.314E-05	0.11833	6.0139E-05	-0.025581	-1.3001E-05	508.2275176781704	29.93	0.76656	29.915	29.601	30.367	-0.015167					34	17	3	0	0	0	0.58668	2	1531	1531;1556		47.657	5.1829	1	110850			13217	773	9094	9102	15185;15186	15185					-0.06596870384282738
GTDPTPQHY	9	Unmodified	_GTDPTPQHY_					0	0	0		nc|ENSG00000010810|P06241-3|FYN;nc|ENSG00000010810|P06241-2|FYN;ENSG00000010810|ENST00000354650|FYN;ENST00000521361.5_1_6:112040873-112041254:-|nuORF	nc|ENSG00000010810|P06241-3|FYN	nc|ENSG00000010810|P06241-3|FYN	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	508.227613	1014.44067	-0.50711	-0.00025773	0.3184	0.00016182	-0.18871	-9.5905E-05	508.2278248486864	30.014	0.46305	30.08	29.897	30.361	0.066727	0.16067	0.00038828	NaN	52.937	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62873			13218	773	9094	9102							-0.06596870384282738
GTDPTPQHY	9	Unmodified	_GTDPTPQHY_					0	0	0		nc|ENSG00000010810|P06241-3|FYN;nc|ENSG00000010810|P06241-2|FYN;ENSG00000010810|ENST00000354650|FYN;ENST00000521361.5_1_6:112040873-112041254:-|nuORF	nc|ENSG00000010810|P06241-3|FYN	nc|ENSG00000010810|P06241-3|FYN	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	508.227613	1014.44067	0.16922	8.6005E-05	-0.44478	-0.00022605	-0.27555	-0.00014004	508.227363267361	29.651	0.3923	29.763	29.551	29.943	0.11225	-0.15641	-0.00038747	NaN	52.937	30	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76898			13219	773	9094	9102							-0.06596870384282738
GTEPPLVL	8	Unmodified	_GTEPPLVL_					0	0	0		ENST00000404076.5_3_1:204889773-204889854:+|nuORF	ENST00000404076.5_3_1:204889773-204889854:+|nuORF	ENST00000404076.5_3_1:204889773-204889854:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2372131347656	2	413.239461	824.46437	-0.18778	-7.7597E-05	-2.7175	-0.001123	-2.9053	-0.0012006	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.86288	1	7222	7222		26.796	0	1	1747900			13220	11257	9095	9103	15187	15187					0.04511595120175116
GTFGGLGSK	9	Unmodified	_GTFGGLGSK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.21942138671875	2	412.21906	822.423567	1.3839	0.00057047	-0.32646	-0.00013457	1.0574	0.00043589	412.2188251361589	34.862	0.90005	35.072	34.769	35.67	0.21003					36	22	2	0	0	0	0.3164	1	2620	2620		63.534	2.5619	1	2508800			13221	3371	9096	9104	15188	15188					0.00525253800583414
GTFGGLGSK	9	Unmodified	_GTFGGLGSK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.2195739746094	2	412.21906	822.423567	1.2472	0.00051414	0.02016	8.3105E-06	1.2674	0.00052245	412.21894629122863	34.843	0.97324	35.224	34.852	35.825	0.3812					45	24	3	0	0	0	0.29259	1	2626	2626		65.465	4.4934	1	2148400			13222	3371	9096	9104	15189	15189					0.00525253800583414
GTFHVKLPK	9	Unmodified	_GTFHVKLPK_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;nc|ENSG00000155974|Q9Y3R0-3|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;ENSG00000155974|ENST00000359742|GRIP1	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087158203125	2	513.808377	1025.6022	-1.4174	-0.00072826	2.551	0.0013107	1.1336	0.00058246	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.7932	1	3941	3941		26.693	2.4902	1	1977600			13223	4721	9097	9105	15190	15190					0.0904234343945518
GTFHVKLPK	9	Unmodified	_GTFHVKLPK_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;nc|ENSG00000155974|Q9Y3R0-3|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;ENSG00000155974|ENST00000359742|GRIP1	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8085327148438	2	513.808377	1025.6022	0.034734	1.7846E-05	1.2224	0.00062807	1.2571	0.00064592	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.74721	1	4556	4556		37.159	9.2769	1	666950			13224	4721	9097	9105	15191	15191					0.0904234343945518
GTFHVKLPK	9	Unmodified	_GTFHVKLPK_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;nc|ENSG00000155974|Q9Y3R0-3|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;ENSG00000155974|ENST00000359742|GRIP1	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.809814453125	2	513.808377	1025.6022	-0.43911	-0.00022562	1.5531	0.00079801	1.114	0.00057239	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.78983	1	4359	4359		27.882	1.1893	1	1606900			13225	4721	9097	9105	15192	15192					0.0904234343945518
GTFHVKLPK	9	Unmodified	_GTFHVKLPK_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;nc|ENSG00000155974|Q9Y3R0-3|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;ENSG00000155974|ENST00000359742|GRIP1	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.80859375	2	513.808377	1025.6022	-0.12671	-6.5103E-05	1.3179	0.00067714	1.1912	0.00061204	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.7932	1	3957	3957		23.042	1.3402	1	1731500			13226	4721	9097	9105	15193	15193					0.0904234343945518
GTFHVKLPK	9	Unmodified	_GTFHVKLPK_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;nc|ENSG00000155974|Q9Y3R0-3|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;ENSG00000155974|ENST00000359742|GRIP1	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8087768554688	2	513.808377	1025.6022	-0.18035	-9.2668E-05	1.1688	0.00060056	0.98848	0.00050789	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.7932	1	4227	4227		23.042	1.0826	1	1777300			13227	4721	9097	9105	15194	15194					0.0904234343945518
GTFHVKLPK	9	Unmodified	_GTFHVKLPK_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;nc|ENSG00000155974|Q9Y3R0-3|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;ENSG00000155974|ENST00000359742|GRIP1	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8079833984375	2	513.808377	1025.6022	0.34332	0.0001764	0.75485	0.00038785	1.0982	0.00056425	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.78983	1	3779	3779		27.882	3.6795	1	1306000			13228	4721	9097	9105	15195	15195					0.0904234343945518
GTFHVKLPK	9	Unmodified	_GTFHVKLPK_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;nc|ENSG00000155974|Q9Y3R0-3|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;ENSG00000155974|ENST00000359742|GRIP1	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8087158203125	2	513.808377	1025.6022	0.35777	0.00018383	0.79125	0.00040655	1.149	0.00059038	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.74721	1	3905	3905		37.159	12.956	1	1443600			13229	4721	9097	9105	15196	15196					0.0904234343945518
GTFHVKLPK	9	Unmodified	_GTFHVKLPK_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;nc|ENSG00000155974|Q9Y3R0-3|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;ENSG00000155974|ENST00000359742|GRIP1	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8085327148438	2	513.808377	1025.6022	-0.15906	-8.1728E-05	1.3381	0.00068753	1.179	0.0006058	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.7932	1	3722	3722		23.042	3.6825	1	1484700			13230	4721	9097	9105	15197	15197					0.0904234343945518
GTFHVKLPK	9	Unmodified	_GTFHVKLPK_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;nc|ENSG00000155974|Q9Y3R0-3|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;ENSG00000155974|ENST00000359742|GRIP1	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8089599609375	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.7932	1	3899	3899		23.042	2.0956	1	1550000			13231	4721	9097	9105	15198	15198					0.0904234343945518
GTFHVKLPK	9	Unmodified	_GTFHVKLPK_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;nc|ENSG00000155974|Q9Y3R0-3|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;ENSG00000155974|ENST00000359742|GRIP1	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8089599609375	2	513.808377	1025.6022	-0.49115	-0.00025236	1.4357	0.00073767	0.94454	0.00048531	513.8089618478288	47.549	2.118	48.472	47.871	49.989	0.92315					109	52	4	0	0	0	0.7932	1	4563	4563		26.693	1.1189	1	2805200			13232	4721	9097	9105	15199	15199					0.0904234343945518
GTGAEQACE	9	Unmodified	_GTGAEQACE_					0	0	0		ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.2551574707031	2	433.17145	864.328346	1.8572	0.00080448	3.6586	0.0015848	5.5158	0.0023893	433.1737664848063	107.27	0.1656	107.37	107.27	107.44	0.10395					5	4	2	0	0	0	0.20789	1	13092	13092		35.618	8.9254	1	57549			13233	8508	9098	9106	15200	15200					-0.10924467452787212
GTGGLPRW	8	Unmodified	_GTGGLPRW_					0	0	0		ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2279968261719	2	422.22722	842.439886	-1.5227	-0.00064292	3.5197	0.0014861	1.997	0.00084319	422.2286072039903	64.658	1.0335	64.658	64.292	65.325	0					111	47	3	0	0	0	0.87922	1	5690	5690		31.955	3.7006	1	501820			13234	5259	9099	9107	15201	15201					0.012363797573243573
GTGGLPRW	8	Unmodified	_GTGGLPRW_					0	0	0		ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2276306152344	2	422.22722	842.439886	-0.15008	-6.3366E-05	1.8971	0.00080102	1.7471	0.00073766	422.2279211872398	56.283	1.5639	56.273	54.85	56.414	-0.010136					80	48	2	0	0	0	0.86288	1	5033	5033		26.796	0	1	747250			13235	5259	9099	9107	15202	15202					0.012363797573243573
GTGGLPRW	8	Unmodified	_GTGGLPRW_					0	0	0		ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2283020019531	2	422.22722	842.439886	-0.188	-7.9378E-05	2.0882	0.00088171	1.9002	0.00080234	422.22800326383765	64.571	1.1453	64.57	64.134	65.279	-0.00078583					74	34	3	0	0	0	0.85277	1	6020	6020		25.45	0	1	496030			13236	5259	9099	9107	15203	15203					0.012363797573243573
GTGGLPRW	8	Unmodified	_GTGGLPRW_					0	0	0		ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2279968261719	2	422.22722	842.439886	-0.30034	-0.00012681	2.3706	0.0010009	2.0702	0.00087411	422.22807899048587	64.416	1.0603	64.382	64.026	65.086	-0.034248					75	29	3	0	0	0	0.87922	1	6153	6153		31.955	3.7006	1	581950			13237	5259	9099	9107	15204	15204					0.012363797573243573
GTGGLPRW	8	Unmodified	_GTGGLPRW_					0	0	0		ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.227783203125	2	422.22722	842.439886	1.4046	0.00059308	0.57845	0.00024424	1.9831	0.00083732	422.2272983859282	64.331	2.0044	64.358	63.19	65.195	0.027138					107	65	3	0	0	0	0.89962	1	6065	6065		38.806	5.2906	1	528250			13238	5259	9099	9107	15205	15205					0.012363797573243573
GTGGLPRW	8	Unmodified	_GTGGLPRW_					0	0	0		ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2280578613281	2	422.22722	842.439886	-1.7987	-0.00075945	3.6985	0.0015616	1.8999	0.00080217	422.2287015198112	64.24	0.93478	64.36	64.014	64.949	0.12005					82	33	3	0	0	0	0.87922	2	5637	5637;5644		31.955	2.8053	1	614800			13239	5259	9099	9107	15206;15207	15206					0.012363797573243573
GTGGLPRW	8	Unmodified	_GTGGLPRW_					0	0	0		ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2255859375	2	422.22722	842.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.348	1	61.455	60.955	61.955	0.10743								0	0	0	0.29344	1	5330	5330		31.955	6.5047	1				13240	5259	9099	9107	15208	15208					0.012363797573243573
GTGGLPRW	8	Unmodified	_GTGGLPRW_					0	0	0		ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.22845458984375	2	422.22722	842.439886	-0.74187	-0.00031324	2.4502	0.0010345	1.7083	0.00072129	422.22815757108447	56.228	1.1679	56.202	55.178	56.346	-0.026108					95	44	3	0	0	0	0.80706	1	4727	4727		19.36	0	1	764250			13241	5259	9099	9107	15209	15209					0.012363797573243573
GTGGLPRW	8	Unmodified	_GTGGLPRW_					0	0	0		ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2283630371094	2	422.22722	842.439886	-1.0391	-0.00043872	2.9759	0.0012565	1.9369	0.0008178	422.2283416890696	64.395	1.1539	64.425	64.021	65.175	0.030243					96	39	3	0	0	0	0.85277	1	5687	5687		25.45	1.2474	1	492400			13242	5259	9099	9107	15210	15210					0.012363797573243573
GTGKLPSILC	10	Unmodified	_GTGKLPSILC_					0	0	0		ENST00000552980.6_2_12:53848288-53848345:+|nuORF	ENST00000552980.6_2_12:53848288-53848345:+|nuORF	ENST00000552980.6_2_12:53848288-53848345:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7803039550781	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.153	1	87.302	86.802	87.802	0.14956								0	0	0	0.45132	1	8602	8602		36.447	1.246	1				13243	13690	9100	9108	15211	15211					0.04803284713909761
GTGRLPAW	8	Unmodified	_GTGRLPAW_					0	0	0			REV__ENST00000478260.5_1_11:3109207-3109429:-|nuORF	REV__ENST00000478260.5_1_11:3109207-3109429:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	429.2356872558594	2	429.235045	856.455536	-0.17888	-7.6781E-05	1.7289	0.00074211	1.55	0.00066533	429.2356452046458	63.375	2.3242	63.37	62.729	65.053	-0.0055504					274	88	5	0	0	0	0.85277	2	5923	5880;5923		31.955	1.4512	1	5346500	+		13244	27377	9101	9109	15212;15213	15213					0.021566662743680354
GTGRLPAW	8	Unmodified	_GTGRLPAW_					0	0	0			REV__ENST00000478260.5_1_11:3109207-3109429:-|nuORF	REV__ENST00000478260.5_1_11:3109207-3109429:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	429.2357177734375	2	429.235045	856.455536	-0.18423	-7.9079E-05	1.7315	0.00074323	1.5473	0.00066416	429.2356552162288	63.259	2.3661	63.225	62.64	65.006	-0.03371					245	81	5	0	0	0	0.87479	1	5992	5992		30.504	0.6621	1	5881100	+		13245	27377	9101	9109	15214	15214					0.021566662743680354
GTGRLPAW	8	Unmodified	_GTGRLPAW_					0	0	0			REV__ENST00000478260.5_1_11:3109207-3109429:-|nuORF	REV__ENST00000478260.5_1_11:3109207-3109429:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.23565673828125	2	429.235045	856.455536	0.39502	0.00016955	1.1956	0.00051318	1.5906	0.00068273	429.2354268655387	63.129	2.3304	63.252	62.677	65.007	0.12252					259	94	5	0	0	0	0.85277	1	5545	5545		25.45	1.2474	1	5976700	+		13246	27377	9101	9109	15215	15215					0.021566662743680354
GTGVEKPE	8	Unmodified	_GTGVEKPE_					0	0	0			REV__ENST00000474229.1_1_14:105174633-105175035:+|nuORF	REV__ENST00000474229.1_1_14:105174633-105175035:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.7087707519531	2	408.708525	815.402498	-0.4052	-0.00016561	2.5412	0.0010386	2.136	0.00087299	408.7094839420539	16.578	0.32012	16.498	16.405	16.725	-0.080017					23	12	3	0	0	0	0.91472	1	128	128		44.117	5.3107	1	120360	+		13247	27295	9102	9110	15216	15216					-0.01258756298955177
GTHGHQSGR	9	Unmodified	_GTHGHQSGR_					0	0	0			REV__ENSG00000165757|ENST00000375377|JCAD	REV__ENSG00000165757|ENST00000375377|JCAD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.72283935546875	2	468.723364	935.432175	-0.82424	-0.00038634	0.65271	0.00030594	-0.17153	-8.0399E-05	468.7236330503741	70.3	0.63596	70.262	70.051	70.687	-0.037865					55	33	2	0	0	0	0.78983	1	6834	6834		27.882	0	1	322340	+		13248	21214	9103	9111	15217	15217					-0.03812379510247865
GTHIKLWK	8	Unmodified	_GTHIKLWK_					0	0	0		ENST00000566338.5_1_15:31233675-31240771:-|nuORF;ENST00000567567.5_1_15:31233675-31258111:-|nuORF;ENSG00000166912|ENST00000435680|MTMR10	ENST00000566338.5_1_15:31233675-31240771:-|nuORF	ENST00000566338.5_1_15:31233675-31240771:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.2981872558594	2	491.795269	981.575986	-1.6329	-0.00080306	1.561	0.00076767	-0.071965	-3.5392E-05	491.7959208879528	43.173	1.2305	43.173	42.794	44.024	0					52	29	2	0	0	0	0.85277	1	3052	3052		25.45	1.2474	1	189890			13249	6246	9104	9112	15218	15218					0.08446074267988024
GTHPIPVH	8	Unmodified	_GTHPIPVH_					0	0	0		ENST00000443328.2_1_17:48556221-48557532:+|nuORF	ENST00000443328.2_1_17:48556221-48557532:+|nuORF	ENST00000443328.2_1_17:48556221-48557532:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	429.2357177734375	2	429.235045	856.455536	-0.18423	-7.9079E-05	1.7315	0.00074323	1.5473	0.00066416	429.2356552162288	63.259	2.3661	63.225	62.64	65.006	-0.03371					245	81	5	0	0	0	0.81548	1	6028	6028		20.482	1.1219	1	5881100			13250	11802	9105	9113	15219	15219					0.02156666274379404
GTIKAKGSL	9	Unmodified	_GTIKAKGSL_					0	0	0			REV__ENSG00000068654|ENST00000263857|POLR1A	REV__ENSG00000068654|ENST00000263857|POLR1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713317871094	2	437.77146	873.528367	-0.63876	-0.00027963	0.070293	3.0772E-05	-0.56847	-0.00024886	437.77162175664915	38.677	1.0193	39.199	38.87	39.89	0.52235					96	23	6	0	0	0	0.7932	1	3253	3253		14.865	0.72775	1	19739000	+		13251	16562	9106	9114	15220	15220					0.08654375277149029
GTIKAKLSG	9	Unmodified	_GTIKAKLSG_					0	0	0		nc|ENSG00000047932|Q9HD26-3|GOPC;ENSG00000047932|ENST00000368498|GOPC	nc|ENSG00000047932|Q9HD26-3|GOPC	nc|ENSG00000047932|Q9HD26-3|GOPC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7713928222656	2	437.77146	873.528367	-1.5858	-0.00069423	1.3768	0.00060274	-0.20899	-9.1491E-05	437.77200270373476	39.973	1.5307	39.98	39.296	40.827	0.0065002					71	45	3	0	0	0	0.7932	1	2483	2483		24.519	2.8169	1	3015800			13252	970	9107	9115	15221	15221					0.0865437527713766
GTIKAKLSG	9	Unmodified	_GTIKAKLSG_					0	0	0		nc|ENSG00000047932|Q9HD26-3|GOPC;ENSG00000047932|ENST00000368498|GOPC	nc|ENSG00000047932|Q9HD26-3|GOPC	nc|ENSG00000047932|Q9HD26-3|GOPC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77130126953125	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.7932	3	2887	2887;2995;3034		24.519	4.5224	1	13476000			13253	970	9107	9115	15222;15223;15224	15222					0.0865437527713766
GTIKAKLSG	9	Unmodified	_GTIKAKLSG_					0	0	0		nc|ENSG00000047932|Q9HD26-3|GOPC;ENSG00000047932|ENST00000368498|GOPC	nc|ENSG00000047932|Q9HD26-3|GOPC	nc|ENSG00000047932|Q9HD26-3|GOPC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7711486816406	2	437.77146	873.528367	-0.63876	-0.00027963	0.070293	3.0772E-05	-0.56847	-0.00024886	437.77162175664915	38.677	1.0193	39.199	38.87	39.89	0.52235					96	23	6	0	0	0	0.7932	1	3217	3217		26.693	8.3685	1	19739000			13254	970	9107	9115	15225	15225					0.0865437527713766
GTITITVGQR	10	Unmodified	_GTITITVGQR_					0	0	0		nc|ENSG00000131016|Q02952-2|AKAP12	nc|ENSG00000131016|Q02952-2|AKAP12	nc|ENSG00000131016|Q02952-2|AKAP12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3032836914062	2	523.303655	1044.59276	1.4247	0.00074556	-1.721	-0.00090062	-0.29632	-0.00015507	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.86225	1	8897	8897		32.751	3.5805	1	3882100			13255	14911	9108	9116	15226	15226					0.07224530363282611
GTIVMRQP	8	Unmodified	_GTIVMRQP_					0	0	0			REV__ENST00000402744.8_1_4:166414410-166416791:+|nuORF	REV__ENST00000402744.8_1_4:166414410-166416791:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2480163574219	2	451.249837	900.485122	-0.60944	-0.00027501	-1.6864	-0.00076097	-2.2958	-0.001036	451.24890898084885	67.67	1.2739	67.634	67.25	68.524	-0.035698					111	49	3	0	0	0	0.8347	1	6528	6528		23.042	0.0057756	1	185140	+		13256	26267	9109	9117	15227	15227					0.03089862228216589
GTKALHSR	8	Unmodified	_GTKALHSR_					0	0	0		nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;ENSG00000183530|ENST00000327423|PRR14L;nc|ENSG00000183530|Q5THK1-3|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2515563964844	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87479	1	7601	7601		30.504	1.3541	1	2823900			13257	7538	9110	9118	15228	15228					0.04839453677379879
GTKARSTH	8	Unmodified	_GTKARSTH_					0	0	0			REV__ENST00000394947.7_1_15:75663751-75664036:-|nuORF	REV__ENST00000394947.7_1_15:75663751-75664036:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7506408691406	2	429.233033	856.451513	0.60306	0.00025885	-1.6973	-0.00072853	-1.0942	-0.00046967	429.2318511327139	35.743	0.37255	35.991	35.746	36.118	0.24769					18	9	3	0	0	0	0.4196	1	2743	2743		40.778	1.5253	1	78138	+		13258	26093	9111	9119	15229	15229					0.017545767806609547
GTKESFLKRR	10	Unmodified	_GTKESFLKRR_					0	0	0		ENST00000391992.3_1_12:9181361-9181625:-|nuORF	ENST00000391992.3_1_12:9181361-9181625:-|nuORF	ENST00000391992.3_1_12:9181361-9181625:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.350341796875	2	611.356754	1220.69895	-0.40504	-0.00024762	-0.069959	-4.277E-05	-0.475	-0.00029039	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.86106	1	10265	10265		33.922	5.8401	1	12417000			13259	11005	9112	9120	15230	15230					0.09743285928584555
GTKESFLKRR	10	Unmodified	_GTKESFLKRR_					0	0	0		ENST00000391992.3_1_12:9181361-9181625:-|nuORF	ENST00000391992.3_1_12:9181361-9181625:-|nuORF	ENST00000391992.3_1_12:9181361-9181625:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3489990234375	2	611.356754	1220.69895	2.4219	0.0014807	-3.0766	-0.0018809	-0.65465	-0.00040023	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.82886	1	10483	10483		37.812	2.6595	1	12656000			13260	11005	9112	9120	15231	15231					0.09743285928584555
GTKLETIRKIH	11	Unmodified	_GTKLETIRKIH_					0	0	0		nc|ENSG00000147044|O14936-3|CASK;nc|ENSG00000147044|O14936-4|CASK;nc|ENSG00000147044|O14936-6|CASK;nc|ENSG00000147044|O14936-2|CASK;ENSG00000147044|ENST00000378163|CASK;nc|ENSG00000147044|O14936-5|CASK	nc|ENSG00000147044|O14936-3|CASK	nc|ENSG00000147044|O14936-3|CASK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5977478027344	3	432.597983	1294.77212	-1.5719	-0.00068002	0.90427	0.00039118	-0.66768	-0.00028884	432.5984109358272	105.99	1.0468	106.14	105.65	106.69	0.14843					117	25	6	0	0	0	0.75906	1	11306	11306		13.73	0	1	44749000			13261	4875	9113	9121	15232	15232					0.13652414651232903
GTKPEEPL	8	Unmodified	_GTKPEEPL_					0	0	0		nc|ENSG00000013619|Q13495-4|MAMLD1;ENSG00000013619|ENST00000370401|MAMLD1;nc|ENSG00000013619|Q13495-3|MAMLD1	nc|ENSG00000013619|Q13495-4|MAMLD1	nc|ENSG00000013619|Q13495-4|MAMLD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2999267578125	2	435.732	869.449448	0.16069	7.0017E-05	0.26824	0.00011688	0.42893	0.0001869	435.7319743841901	68.834	0.57341	69.218	68.821	69.394	0.38416					16	13	2	0	0	0	0.4196	1	7583	7583		16.473	0.83134	1	65319			13262	811	9114	9122	15233	15233					0.009501032521825437
GTKPRTKTV	9	Unmodified	_GTKPRTKTV_					0	0	0		ENSG00000099290|ENST00000282633|WASHC2A;nc|ENSG00000099290|Q641Q2-2|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C	ENSG00000099290|ENST00000282633|WASHC2A	ENSG00000099290|ENST00000282633|WASHC2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.3008728027344	2	494.300916	986.587279	0.88078	0.00043537	-1.0905	-0.00053901	-0.20967	-0.00010364	494.3002880194073	97.072	3.8769	97.462	96.82	100.7	0.39066					309	95	6	0	0	0	0.76764	1	11706	11706		34.173	0	1	27149000			13263	1753	9115	9123	15234	15234					0.09344851571472645
GTKRGAARRH	10	Unmodified	_GTKRGAARRH_					0	0	0			REV__ENST00000338560.11_1_17:16318878-16320981:+|nuORF	REV__ENST00000338560.11_1_17:16318878-16320981:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3575439453125	2	555.32358	1108.63261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.786	1	22.835	22.335	23.335	0.048553								0	0	0	0.45132	1	698	698		23.523	1.5628	1		+		13264	25222	9116	9124	15235	15235					0.08263514877239686
GTKRGKVTP	9	Unmodified	_GTKRGKVTP_					0	0	0			REV__ENST00000506894.5_1_4:176622911-176923710:-|nuORF	REV__ENST00000506894.5_1_4:176622911-176923710:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28753662109375	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.7932	1	10059	10059		25.574	2.5316	1	48696000	+		13265	27897	9117	9125	15236	15236					0.08748582400005489
GTKRGKVTP	9	Unmodified	_GTKRGKVTP_					0	0	0			REV__ENST00000506894.5_1_4:176622911-176923710:-|nuORF	REV__ENST00000506894.5_1_4:176622911-176923710:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2878723144531	2	472.287808	942.561064	1.4182	0.00066978	-1.3444	-0.00063493	0.07378	3.4846E-05	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.7932	1	11581	11581		24.519	2.5593	1	21289000	+		13266	27897	9117	9125	15237	15237					0.08748582400005489
GTLAESPLQK	10	Unmodified	_GTLAESPLQK_					0	0	0			REV__ENST00000283027.9_1_16:10862971-10863142:+|nuORF	REV__ENST00000283027.9_1_16:10862971-10863142:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.2883911132812	2	522.290214	1042.56587	0.41131	0.00021482	-3.9398	-0.0020577	-3.5284	-0.0018429	522.2880611470658	16.636	0.18278	16.026	15.912	16.095	-0.6107					6	3	2	0	0	0	0.8651	1	162	162		25.574	3.6142	1	125880	+		13267	24616	9118	9126	15238	15238					0.04629421752088092
GTLAESPLQK	10	Unmodified	_GTLAESPLQK_					0	0	0			REV__ENST00000283027.9_1_16:10862971-10863142:+|nuORF	REV__ENST00000283027.9_1_16:10862971-10863142:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	522.290214	1042.56587	1.0012	0.00052294	-4.1559	-0.0021706	-3.1546	-0.0016476	522.2879380603217	16.607	0.27712	16.12	16.006	16.283	-0.48718	0.047286	-0.00014153	NaN	25.574	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138070	+		13268	24616	9118	9126							0.04629421752088092
GTLAESPLQK	10	Unmodified	_GTLAESPLQK_					0	0	0			REV__ENST00000283027.9_1_16:10862971-10863142:+|nuORF	REV__ENST00000283027.9_1_16:10862971-10863142:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	522.290214	1042.56587	0.41131	0.00021482	-3.9398	-0.0020577	-3.5284	-0.0018429	522.2880611470658	16.636	0.18278	16.026	15.912	16.095	-0.6107	-0.047286	8.4232E-05	NaN	25.574	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125880	+		13269	24616	9118	9126							0.04629421752088092
GTLAKKLT	8	Unmodified	_GTLAKKLT_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2577209472656	2	416.268553	830.522553	0.022009	9.1615E-06	-2.3152	-0.00096376	-2.2932	-0.00095459	416.2694747616284	21.826	0.17238	21.907	21.794	21.967	0.081615					12	8	2	0	0	0	0.4196	1	625	625		15.642	0	1	32782	+		13270	19182	9119	9127	15239	15239					0.10051276765454986
GTLGTLRTFLN	11	Unmodified	_GTLGTLRTFLN_					0	0	0		ENSG00000143412|ENST00000368947|ANXA9	ENSG00000143412|ENST00000368947|ANXA9	ENSG00000143412|ENST00000368947|ANXA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.83740234375	2	596.837862	1191.66117	0.17422	0.00010398	0.098387	5.8721E-05	0.27261	0.0001627	596.8378283052709	16.59	0.35754	15.992	15.832	16.189	-0.59873					18	7	4	0	0	0	0.50531	1	161	161		51.528	11.47	1	618920			13271	4627	9120	9128	15240	15240					0.07300774943132637
GTLGVGLGPN	10	Unmodified	_GTLGVGLGPN_					0	0	0			REV__ENST00000486499.1_1_16:31097550-31097697:-|nuORF	REV__ENST00000486499.1_1_16:31097550-31097697:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.7444763183594	2	442.745442	883.476331	1.3194	0.00058415	-2.5186	-0.0011151	-1.1992	-0.00053095	442.74418253682444	89.898	0.78091	89.828	89.395	90.175	-0.069977					47	17	4	0	0	0	0.8651	1	9392	9392		25.574	1.3713	1	760840	+		13272	27554	9121	9129	15241	15241					0.029932118633723803
GTLILIIIVA	10	Unmodified	_GTLILIIIVA_					0	0	0			REV__ENSG00000139514|ENST00000380752|SLC7A1	REV__ENSG00000139514|ENST00000380752|SLC7A1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3541870117188	2	513.352086	1024.68962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.25	1	23.25	22.75	23.75	0								0	0	0	0.45132	1	726	726		24.203	1.1603	1		+		13273	19544	9122	9130	15242	15242					0.17826124590374093
GTLIPLVY	8	Unmodified	_GTLIPLVY_					0	0	0		ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF	ENSG00000149311|ENST00000675843|ATM	ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2616271972656	2	438.265479	874.516405	-1.5746	-0.00069011	-4.2502	-0.0018627	-5.8249	-0.0025528	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.88915	1	2958	2958		35.201	5.3592	1	22924000			13274	5019	9123	9131	15243	15243					0.07412758533951092
GTLLLAPVV	9	Unmodified	_GTLLLAPVV_					0	0	0			REV__ENST00000526349.5_1_8:42716994-42725245:-|nuORF	REV__ENST00000526349.5_1_8:42716994-42725245:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7878723144531	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.7932	1	3614	3614		19.36	1.0356	1	493390	+		13275	28206	9124	9132	15244	15244					0.11308733942325944
GTLLLAPVV	9	Unmodified	_GTLLLAPVV_					0	0	0			REV__ENST00000526349.5_1_8:42716994-42725245:-|nuORF	REV__ENST00000526349.5_1_8:42716994-42725245:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7880554199219	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	1	2436	2436		18.324	0.95945	1	11532000	+		13276	28206	9124	9132	15245	15245					0.11308733942325944
GTLLPLKP	8	Unmodified	_GTLLPLKP_					0	0	0		ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.77471923828125	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.87479	5	3196	3174;3185;3196;3205;3216		53.351	5.3793	1	10965000			13277	1999	9125	9133	15246;15247;15248;15249;15250	15248					0.10712464770847419
GTLLPLKP	8	Unmodified	_GTLLPLKP_					0	0	0		ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77490234375	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.90465	4	3282	3259;3271;3282;3292		50.025	12.436	1	11423000			13278	1999	9125	9133	15251;15252;15253;15254	15253					0.10712464770847419
GTLLPLKP	8	Unmodified	_GTLLPLKP_					0	0	0		ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7749328613281	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.89962	2	3266	3197;3266		47.916	5.2906	1	10266000			13279	1999	9125	9133	15255;15256	15256					0.10712464770847419
GTLLPLKP	8	Unmodified	_GTLLPLKP_					0	0	0		ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7751159667969	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.90465	1	2906	2906		40.573	7.057	1	10440000			13280	1999	9125	9133	15257	15257					0.10712464770847419
GTLLPLKP	8	Unmodified	_GTLLPLKP_					0	0	0		ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7750244140625	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.87479	6	2825	2825;2834;2842;2851;2859;2880		38.806	3.7006	1	9723800			13281	1999	9125	9133	15258;15259;15260;15261;15262;15263	15258					0.10712464770847419
GTLLPLKP	8	Unmodified	_GTLLPLKP_					0	0	0		ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7747497558594	2	419.773471	837.53239	-1.7976	-0.00075458	3.9115	0.0016419	2.1139	0.00088736	419.77504327395843	41.402	2.6775	41.816	41.329	44.007	0.4139					184	68	5	0	0	0	0.84341	5	3692	3607;3619;3631;3643;3692		30.504	5.0938	1	169320000			13282	1999	9125	9133	15264;15265;15266;15267;15268	15268					0.10712464770847419
GTLLPLKP	8	Unmodified	_GTLLPLKP_					0	0	0		ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7752380371094	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.84341	1	3694	3694		24.203	6.8378	1	184570000			13283	1999	9125	9133	15269	15269					0.10712464770847419
GTLLPNWRKLR	11	Unmodified	_GTLLPNWRKLR_					0	0	0		ENSG00000157224|ENST00000496677|CLDN12	ENSG00000157224|ENST00000496677|CLDN12	ENSG00000157224|ENST00000496677|CLDN12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9431457519531	3	451.941973	1352.80409	-1.2962	-0.0005858	3.8588	0.001744	2.5626	0.0011582	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.76892	1	4399	4399		17.833	3.1395	1	734340			13284	5417	9126	9134	15270	15270					0.1417982712500816
GTLLTKGPAM	10	Unmodified	_GTLLTKGPAM_					0	0	0			REV__ENST00000482128.1_1_9:92033286-92051251:-|nuORF	REV__ENST00000482128.1_1_9:92033286-92051251:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7803955078125	2	494.778428	987.542302	-0.074951	-3.7084E-05	4.0919	0.0020246	4.017	0.0019875	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.86348	1	8712	8712		31.53	0	1	651380	+		13285	27462	9127	9135	15271	15271					0.0480328471392113
GTLNTALRSL	10	Unmodified	_GTLNTALRSL_					0	0	0		ENSG00000125780|ENST00000381458|TGM3	ENSG00000125780|ENST00000381458|TGM3	ENSG00000125780|ENST00000381458|TGM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3036499023438	2	523.303655	1044.59276	1.0264	0.00053713	-1.3248	-0.00069329	-0.29841	-0.00015616	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.86348	2	8688	8619;8688		31.53	3.4483	1	3817300			13286	3415	9128	9136	15272;15273	15273					0.07224530363282611
GTLPPIID	8	Unmodified	_GTLPPIID_					0	0	0			REV__nc|ENSG00000067369|Q12888|TP53BP1;REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2371520996094	2	413.239461	824.46437	-1.8341	-0.00075793	0.52075	0.00021519	-1.3134	-0.00054274	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.87479	1	6875	6875		30.504	0	1	2012200	+		13287	16542;28939	9129	9137	15274	15274					0.04511595120197853
GTLRTRLN	8	Unmodified	_GTLRTRLN_					0	0	0			REV__ENSG00000121904|ENST00000373381|CSMD2	REV__ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.77734375	2	465.777608	929.540663	-0.69238	-0.0003225	0.76957	0.00035845	0.077191	3.5954E-05	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.86677	1	9581	9581		27.882	1.1893	1	927810	+		13288	18472	9130	9138	15275	15275					0.07307411740180214
GTLVSQRQI	9	Unmodified	_GTLVSQRQI_					0	0	0			REV__ENSG00000047936|ENST00000368507|ROS1	REV__ENSG00000047936|ENST00000368507|ROS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.290283203125	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.69624	1	8969	8969		40.778	0	1	9566900	+		13289	16361	9131	9139	15276	15276					0.06628261191815454
GTMTGMLYK	9	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_		GTM(0.011)TGM(0.989)LYK		GTM(-19)TGM(19)LYK	0	0	1		nc|ENSG00000204152|Q5SRD1-2|TIMM23B;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000265354|ENST00000580018|TIMM23	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.24072265625	2	509.240821	1016.46709	0.28306	0.00014414	-0.19212	-9.7833E-05	0.090941	4.6311E-05	509.24057100992667	37.53	1.8448	37.843	36.584	38.429	0.31312					93	45	3	0	0	0	0.065196	4	3028	3004;3016;3028;3040		101.6	42.819	2	1877700			13290	7206	9132	9140	15277;15278;15279;15280	15279		124			-0.04048640808809978
GTMTGMLYK	9	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_		GTM(0.146)TGM(0.854)LYK		GTM(-7.7)TGM(7.7)LYK	0	0	1		nc|ENSG00000204152|Q5SRD1-2|TIMM23B;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000265354|ENST00000580018|TIMM23	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2403564453125	2	509.240821	1016.46709	-0.71317	-0.00036317	0.46025	0.00023438	-0.25292	-0.0001288	509.2409670422204	38.376	2.2154	38.718	38.458	40.673	0.34187					95	53	2	0	0	0	0.21969	6	3158	3148;3158;3171;3201;3260;3287		71.877	19.633	2	937320			13291	7206	9132	9140	15281;15282;15283;15284;15285;15286	15282		124			-0.04048640808809978
GTMTGMLYK	9	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_		GTMTGM(1)LYK		GTM(-48)TGM(48)LYK	0	0	1		nc|ENSG00000204152|Q5SRD1-2|TIMM23B;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000265354|ENST00000580018|TIMM23	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2405090332031	2	509.240821	1016.46709	1.1391	0.00058008	-1.2505	-0.00063683	-0.11143	-5.6743E-05	509.2401143468642	37.417	1.6866	37.903	36.79	38.476	0.48581					87	41	4	0	0	0	0.024351	3	3014	3004;3014;3025		122.18	70.841	2	2077300			13292	7206	9132	9140	15287;15288;15289	15288		124			-0.04048640808809978
GTMTGMLYK	9	Oxidation (M)	_GTMTGM(Oxidation (M))LYK_		GTM(0.004)TGM(0.996)LYK		GTM(-24)TGM(24)LYK	0	0	1		nc|ENSG00000204152|Q5SRD1-2|TIMM23B;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000265354|ENST00000580018|TIMM23	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.24053955078125	2	509.240821	1016.46709	-0.12162	-6.1934E-05	-0.097322	-4.956E-05	-0.21894	-0.00011149	509.2406534616815	38.33	2.3682	38.852	38.473	40.841	0.52236					103	56	2	0	0	0	0.11055	3	3160	3148;3160;3185		90.37	23.941	2	906030			13293	7206	9132	9140	15290;15291;15292	15291		124			-0.04048640808809978
GTMTGMLYK	9	Unmodified	_GTMTGMLYK_					0	0	0		nc|ENSG00000204152|Q5SRD1-2|TIMM23B;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000265354|ENST00000580018|TIMM23	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2426452636719	2	501.243363	1000.47217	-1.1632	-0.00058304	1.0624	0.00053253	-0.10076	-5.0503E-05	501.2439789543651	45.681	0.48869	46.153	45.928	46.417	0.47139					29	11	4	0	0	0	0.065196	2	4268	4258;4268		101.6	48.249	1	1753200			13294	7206	9132	9141	15293;15294	15294					-0.02804336946201147
GTMTGMLYK	9	Unmodified	_GTMTGMLYK_					0	0	0		nc|ENSG00000204152|Q5SRD1-2|TIMM23B;ENSG00000204152|ENST00000651259|TIMM23B;ENSG00000178440|ENST00000651763|TIMM23B-AGAP6;ENSG00000265354|ENST00000580018|TIMM23	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	nc|ENSG00000204152|Q5SRD1-2|TIMM23B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2426452636719	2	501.243363	1000.47217	-0.36301	-0.00018196	0.13996	7.0155E-05	-0.22305	-0.0001118	501.2433586903818	45.493	0.51863	46.389	46.129	46.647	0.89542					22	12	2	0	0	0	0.044173	3	4252	4241;4252;4263		110.12	55.344	1	2915900			13295	7206	9132	9141	15295;15296;15297	15296					-0.02804336946201147
GTNDGLKSIL	10	Unmodified	_GTNDGLKSIL_					0	0	0			REV__nc|ENSG00000141298|Q76I76|SSH2	REV__nc|ENSG00000141298|Q76I76|SSH2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7508544921875	2	509.282389	1016.55022	-0.51591	-0.00026275	-0.78904	-0.00040184	-1.305	-0.00066459	509.28185042820445	44.821	0.32201	45.284	45.106	45.428	0.46313					11	7	2	0	0	0	0.37624	1	4109	4109		37.508	16.561	1	139000	+		13296	19671	9133	9142	15298	15298					0.04261135235049096
GTNNEKEAP	9	Unmodified	_GTNNEKEAP_					0	0	0			REV__nc|ENSG00000168032|O75355-2|ENTPD3	REV__nc|ENSG00000168032|O75355-2|ENTPD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2243347167969	2	480.225071	958.435589	0.27485	0.00013199	-0.39974	-0.00019197	-0.12489	-5.9975E-05	480.2247780793244	32.121	0.55891	32.247	31.988	32.546	0.12642					27	12	3	0	0	0	0.48102	1	2225	2225		52.937	10.072	1	385430	+		13297	21453	9134	9143	15299	15299					-0.045291742468975826
GTPHLLSKTF	10	Unmodified	_GTPHLLSKTF_					0	0	0		nc|ENSG00000156860|Q9HAH7-1|FBRS	nc|ENSG00000156860|Q9HAH7-1|FBRS	nc|ENSG00000156860|Q9HAH7-1|FBRS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.8046264648438	2	550.808574	1099.60259	-1.5149	-0.00083443	-2.1486	-0.0011835	-3.6635	-0.0020179	550.8072735830477	30.077	0.6332	30.077	29.793	30.426	0					50	19	3	0	0	0	0.86218	1	1333	1333		32.812	0.85756	1	258040			13298	15018	9135	9144	15300	15300					0.05677718368656315
GTPLDVLE	8	Unmodified	_GTPLDVLE_					0	0	0		ENST00000549868.1_1_12:44152272-44152513:-|nuORF;ENST00000416848.6_1_12:44152272-44152542:-|nuORF	ENST00000549868.1_1_12:44152272-44152513:-|nuORF	ENST00000549868.1_1_12:44152272-44152513:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2282409667969	2	422.226551	842.438549	-0.34254	-0.00014463	3.7936	0.0016017	3.451	0.0014571	422.22799339483345	56.643	0.55728	56.614	56.308	56.865	-0.02866					41	25	2	0	0	0	0.87922	1	5192	5192		31.955	5.1588	1	776510			13299	11401	9136	9145	15301	15301					0.011027008779024072
GTPLVLIIT	9	Unmodified	_GTPLVLIIT_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.80072021484375	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.76255	1	3854	3854		35.618	5.1146	1	5050800			13300	8677	9137	9146	15302	15302					0.11905003113804469
GTPLVLIIT	9	Unmodified	_GTPLVLIIT_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7998046875	2	463.799686	925.584819	-1.7032	-0.00078997	2.9558	0.0013709	1.2525	0.00058091	463.8008996094523	40.729	0.89679	41.318	40.908	41.805	0.58916					67	25	3	0	0	0	0.7932	1	3497	3497		21.96	4.5949	1	5530000			13301	8677	9137	9146	15303	15303					0.11905003113804469
GTPPHVVH	8	Unmodified	_GTPPHVVH_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2277526855469	2	422.22722	842.439886	-1.5227	-0.00064292	3.5197	0.0014861	1.997	0.00084319	422.2286072039903	64.658	1.0335	64.658	64.292	65.325	0					111	47	3	0	0	0	0.86288	2	5665	5665;5672		42.474	18.272	1	501820	+		13302	16090	9138	9147	15304;15305	15304					0.012363797573243573
GTPPHVVH	8	Unmodified	_GTPPHVVH_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.22772216796875	2	422.22722	842.439886	-0.188	-7.9378E-05	2.0882	0.00088171	1.9002	0.00080234	422.22800326383765	64.571	1.1453	64.57	64.134	65.279	-0.00078583					74	34	3	0	0	0	0.86288	2	6028	6011;6028		44.531	5.7249	1	496030	+		13303	16090	9138	9147	15306;15307	15307					0.012363797573243573
GTPPHVVH	8	Unmodified	_GTPPHVVH_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2279357910156	2	422.22722	842.439886	-0.30034	-0.00012681	2.3706	0.0010009	2.0702	0.00087411	422.22807899048587	64.416	1.0603	64.382	64.026	65.086	-0.034248					75	29	3	0	0	0	0.88915	1	6126	6126		35.201	9.7505	1	581950	+		13304	16090	9138	9147	15308	15308					0.012363797573243573
GTPPHVVH	8	Unmodified	_GTPPHVVH_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.22796630859375	2	422.22722	842.439886	1.4046	0.00059308	0.57845	0.00024424	1.9831	0.00083732	422.2272983859282	64.331	2.0044	64.358	63.19	65.195	0.027138					107	65	3	0	0	0	0.86288	1	6038	6038		26.796	1.3459	1	528250	+		13305	16090	9138	9147	15309	15309					0.012363797573243573
GTPPHVVH	8	Unmodified	_GTPPHVVH_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2280578613281	2	422.22722	842.439886	-1.7987	-0.00075945	3.6985	0.0015616	1.8999	0.00080217	422.2287015198112	64.24	0.93478	64.36	64.014	64.949	0.12005					82	33	3	0	0	0	0.884	1	5651	5651		33.516	1.5607	1	614800	+		13306	16090	9138	9147	15310	15310					0.012363797573243573
GTPPHVVH	8	Unmodified	_GTPPHVVH_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2282409667969	2	422.22722	842.439886	0.40511	0.00017105	1.6054	0.00067786	2.0105	0.00084891	422.2277865836404	64.332	1.1229	64.456	64.031	65.154	0.12397					101	41	4	0	0	0	0.88915	2	5656	5656;5664		35.201	10.998	1	502100	+		13307	16090	9138	9147	15311;15312	15311					0.012363797573243573
GTPPKKRPRGT	11	Unmodified	_GTPPKKRPRGT_					0	0	0			REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.856201171875	2	597.856921	1193.69929	-0.32365	-0.0001935	0.21288	0.00012727	-0.11077	-6.6223E-05	598.3588954923197	94.611	4.9065	94.611	93.622	98.528	0					293	115	3	0	0	0	0.69248	1	9302	9302		32.751	6.0576	1	5706300	+		13308	27272	9139	9148	15313	15313					0.11018705648439209
GTPPKKRPRGT	11	Unmodified	_GTPPKKRPRGT_					0	0	0			REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8557739257812	2	597.856921	1193.69929	-0.56225	-0.00033615	-0.53243	-0.00031831	-1.0947	-0.00065446	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.51007	2	9647	9469;9647		51.193	6.8155	1	2042000	+		13309	27272	9139	9148	15314;15315	15315					0.11018705648439209
GTPPKKRPRGT	11	Unmodified	_GTPPKKRPRGT_					0	0	0			REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8558959960938	2	597.856921	1193.69929	-0.56163	-0.00033577	-0.46706	-0.00027924	-1.0287	-0.00061501	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.67778	1	9868	9868		35.152	0.97948	1	6282800	+		13310	27272	9139	9148	15316	15316					0.11018705648439209
GTPPKKRPRGT	11	Unmodified	_GTPPKKRPRGT_					0	0	0			REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.855712890625	2	597.856921	1193.69929	2.1625	0.0012929	-3.3793	-0.0020203	-1.2168	-0.00072745	597.8546696490685	92.423	2.9286	92.359	90.439	93.367	-0.06414					206	70	4	0	0	0	0.61369	2	9762	9762;9811		42.864	3.6114	1	2186000	+		13311	27272	9139	9148	15317;15318	15317					0.11018705648439209
GTPPKKRPRGT	11	Unmodified	_GTPPKKRPRGT_					0	0	0			REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8556518554688	2	597.856921	1193.69929	-0.43134	-0.00025788	-0.57301	-0.00034258	-1.0043	-0.00060046	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.51007	3	9904	9904;9952;10037		51.193	6.8155	1	6857100	+		13312	27272	9139	9148	15319;15320;15321	15319					0.11018705648439209
GTPPKKRPRGT	11	Unmodified	_GTPPKKRPRGT_					0	0	0			REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.855712890625	2	597.856921	1193.69929	0.93581	0.00055948	-2.1237	-0.0012697	-1.1879	-0.00071018	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.66929	2	9200	9200;9259		36.447	7.0705	1	2638300	+		13313	27272	9139	9148	15322;15323	15322					0.11018705648439209
GTPPKKRPRGT	11	Unmodified	_GTPPKKRPRGT_					0	0	0			REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	REV__ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.85595703125	2	597.856921	1193.69929	0.8216	0.0004912	-2.0016	-0.0011967	-1.18	-0.00070545	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.53361	1	9197	9197		49.536	3.5638	1	2486400	+		13314	27272	9139	9148	15324	15324					0.11018705648439209
GTQLHKAF	8	Unmodified	_GTQLHKAF_					0	0	0			REV__ENSG00000101161|ENST00000266079|PRPF6	REV__ENSG00000101161|ENST00000266079|PRPF6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2486267089844	2	451.248152	900.481751	-1.5029	-0.0006782	3.2139	0.0014503	1.711	0.00077208	451.24948444631724	65.955	1.2112	65.955	65.412	66.623	0					127	65	2	0	0	0	0.87922	1	5841	5841		31.955	2.8053	1	815400	+		13315	17246	9140	9149	15325	15325					0.02752935445857929
GTQQRQLL	8	Unmodified	_GTQQRQLL_					0	0	0		nc|ENSG00000100722|Q6PJT7-9|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;nc|ENSG00000100722|Q6PJT7-11|ZC3H14;nc|ENSG00000100722|Q6PJT7-6|ZC3H14	nc|ENSG00000100722|Q6PJT7-9|ZC3H14	nc|ENSG00000100722|Q6PJT7-9|ZC3H14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2874755859375	2	472.269616	942.524678	-0.022131	-1.0452E-05	1.4001	0.00066124	1.378	0.00065079	472.27030011988376	95.261	0.53558	95.308	94.877	95.412	0.046982					26	12	3	0	0	0	0.4196	1	10054	10054		39.253	3.6345	1	574590			13316	1862	9141	9150	15326	15326					0.051117055032818826
GTQVGMPVCY	10	Unmodified	_GTQVGMPVCY_					0	0	0			REV__ENST00000465768.1_1_22:44386239-44405402:+|nuORF	REV__ENST00000465768.1_1_22:44386239-44405402:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.7410278320312	2	527.738445	1053.46234	0.67387	0.00035563	2.898	0.0015294	3.5718	0.001885	527.7399290779722	69.408	0.65604	69.792	69.351	70.007	0.38416					27	17	2	0	0	0	0.37206	1	7647	7647		66.429	0.6261	1	405250	+		13317	17177	9142	9151	15327	15327					-0.06225524951582884
GTQVGMPVCY	10	Unmodified	_GTQVGMPVCY_					0	0	0			REV__ENST00000465768.1_1_22:44386239-44405402:+|nuORF	REV__ENST00000465768.1_1_22:44386239-44405402:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	527.738445	1053.46234	0.67387	0.00035563	2.898	0.0015294	3.5718	0.001885	527.7399290779722	69.408	0.65604	69.792	69.351	70.007	0.38416	-0.045864	-0.00028599	NaN	66.429	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	405250	+		13318	17177	9142	9151							-0.06225524951582884
GTQVGMPVCY	10	Unmodified	_GTQVGMPVCY_					0	0	0			REV__ENST00000465768.1_1_22:44386239-44405402:+|nuORF	REV__ENST00000465768.1_1_22:44386239-44405402:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	527.738445	1053.46234	-0.084029	-4.4345E-05	4.1069	0.0021674	4.0229	0.002123	527.7400567152936	69.337	0.5638	69.884	69.408	69.972	0.54694	0.045864	0.00099003	NaN	66.429	35	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	419360	+		13319	17177	9142	9151							-0.06225524951582884
GTRDIKLCL	9	Unmodified	_GTRDIKLCL_					0	0	0			REV__ENST00000504355.5_1_4:186435442-186456588:-|nuORF	REV__ENST00000504355.5_1_4:186435442-186456588:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.2899169921875	2	509.789327	1017.5641	-0.49411	-0.00025189	0.42651	0.00021743	-0.0676	-3.4462E-05	510.2907867562299	23.644	1.341	23.696	23.031	24.372	0.05291					78	64	2	0	0	0	0.7932	1	757	757		23.042	2.0956	1	116410	+		13320	27856	9143	9152	15328	15328					0.056020894624680295
GTRGKSIYKKK	11	Unmodified	_GTRGKSIYKKK_					0	0	0		ENST00000427240.1_1_1:39997676-40011451:-|nuORF	ENST00000427240.1_1_1:39997676-40011451:-|nuORF	ENST00000427240.1_1_1:39997676-40011451:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5928955078125	3	422.594461	1264.76155	-0.14442	-6.1032E-05	-4.0047	-0.0016924	-4.1492	-0.0017534	422.5926654554972	55.449	1.1746	55.439	55.01	56.184	-0.010132					83	31	3	0	0	0	0.75779	1	4943	4943		20.315	2.4819	1	310110			13321	11570	9144	9153	15329	15329					0.13976431996775318
GTRLEIYLSDL	11	Unmodified	_GTRLEIYLSDL_					0	0	0		ENST00000521033.5_1_5:160061154-160212677:-|nuORF	ENST00000521033.5_1_5:160061154-160212677:-|nuORF	ENST00000521033.5_1_5:160061154-160212677:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3473510742188	2	640.34826	1278.68197	-1.1585	-0.00074186	-0.96372	-0.00061711	-2.1222	-0.001359	640.3478002784658	103.51	0.50305	103.63	103.35	103.85	0.11495					31	12	4	0	0	0	0.62614	1	10892	10892		41.427	2.1738	1	714470			13322	13166	9145	9154	15330	15330					0.05377320532147678
GTRLRPTPV	9	Unmodified	_GTRLRPTPV_					0	0	0			REV__ENST00000562994.5_2_16:86580251-86585743:-|nuORF	REV__ENST00000562994.5_2_16:86580251-86585743:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.8018798828125	2	498.801083	995.587613	0.3731	0.0001861	-0.12173	-6.0717E-05	0.25138	0.00012539	498.80309173814476	53.226	0.55856	53.296	53.083	53.642	0.070713					22	15	2	0	0	0	0.77244	1	4324	4324		32.812	0	1	55521	+		13323	17399	9146	9155	15331	15331					0.08964271291324621
GTRPARKKF	9	Unmodified	_GTRPARKKF_					0	0	0		nc|ENSG00000116852|O75037-3|KIF21B;ENSG00000116852|ENST00000461742|KIF21B;nc|ENSG00000116852|O75037-2|KIF21B;nc|ENSG00000116852|O75037|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8204345703125	2	530.82235	1059.63015	-0.074689	-3.9646E-05	-2.4695	-0.0013109	-2.5442	-0.0013505	530.8208962267565	82.295	1.0035	82.45	81.96	82.964	0.15474					78	23	4	0	0	0	0.7932	1	7878	7878		23.042	2.5607	1	1979200			13324	2951	9147	9156	15332	15332					0.10271666419566827
GTSLAERLLS	10	Unmodified	_GTSLAERLLS_					0	0	0		nc|ENSG00000230453|A2A2Z9|ANKRD18B;chr9:33541227-33543182|32|16.91|0.48|5.14|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33528841-33529000|31|33.26|0.67|5.62|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33524695-33528727|25|25.92|0.53|5.6|+|ENST00000290943|ANKRD18B,ANKRD18B;ENSG00000230453|ENST00000684830|ANKRD18B;ENSG00000180071|ENST00000399703|ANKRD18A	nc|ENSG00000230453|A2A2Z9|ANKRD18B	nc|ENSG00000230453|A2A2Z9|ANKRD18B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.7921142578125	2	523.795663	1045.57677	0.84786	0.0004441	-4.3825	-0.0022955	-3.5346	-0.0018514	523.7932694014252	18.771	0.68968	18.747	18.6	19.29	-0.024033					67	31	3	0	0	0	0.86621	1	365	365		26.063	2.5407	1	371220			13325	530	9148	9157	15333	15333					0.055808241263775926
GTSLPIPK	8	Unmodified	_GTSLPIPK_					0	0	0			REV__ENST00000418923.2_1_13:103054555-103054606:-|nuORF	REV__ENST00000418923.2_1_13:103054555-103054606:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.29632568359375	2	406.747453	811.480354	0.010766	4.3789E-06	3.6151	0.0014704	3.6259	0.0014748	406.74894066716155	38.039	1.8861	38.011	37.48	39.366	-0.027843					57	43	2	0	0	0	0.4196	1	2656	2656		27.882	0	1	96008	+		13326	26466	9149	9158	15334	15334					0.06707301357084816
GTSLTFSM	8	Unmodified	_GTSLTFSM_					0	0	0		ENST00000466788.1_1_3:59871959-59999780:-|nuORF;ENSG00000189283|ENST00000492590|FHIT	ENST00000466788.1_1_3:59871959-59999780:-|nuORF	ENST00000466788.1_1_3:59871959-59999780:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.25439453125	2	422.199479	842.384405	-0.18658	-7.8776E-05	-0.9303	-0.00039277	-1.1169	-0.00047155	422.19896326084944	85.572	1.9985	85.639	84.16	86.159	0.067261					80	45	2	0	0	0	0.4196	1	8485	8485		30.504	13.139	1	165900			13327	7999	9150	9159	15335	15335					-0.04309214545298801
GTSLTFSM	8	Unmodified	_GTSLTFSM_					0	0	0		ENST00000466788.1_1_3:59871959-59999780:-|nuORF;ENSG00000189283|ENST00000492590|FHIT	ENST00000466788.1_1_3:59871959-59999780:-|nuORF	ENST00000466788.1_1_3:59871959-59999780:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	422.199479	842.384405	-1.2176	-0.00051405	0.019481	8.2249E-06	-1.1981	-0.00050583	422.19929620608536	85.377	1.1619	85.377	84.964	86.125	0	-0.10808	0.0008621	NaN	23.042	34	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28437			13328	7999	9150	9159							-0.04309214545298801
GTSRPPVRL	9	Unmodified	_GTSRPPVRL_					0	0	0		ENST00000296657.6_1_5:10653441-10653774:+|nuORF	ENST00000296657.6_1_5:10653441-10653774:+|nuORF	ENST00000296657.6_1_5:10653441-10653774:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7913818359375	2	491.793258	981.571963	-1.178	-0.00057935	3.972	0.0019534	2.794	0.0013741	491.79505307157757	43.662	1.2118	44.112	43.311	44.523	0.45025					60	29	3	0	0	0	0.71772	1	3971	3971		39.253	3.6345	1	1655700			13329	9747	9151	9160	15336	15336					0.08043984774269575
GTSTFALH	8	Unmodified	_GTSTFALH_					0	0	0		ENST00000293894.3_1_16:1035443-1035761:+|nuORF	ENST00000293894.3_1_16:1035443-1035761:+|nuORF	ENST00000293894.3_1_16:1035443-1035761:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2895812988281	2	417.211235	832.407917	-1.8226	-0.0007604	3.9532	0.0016493	2.1307	0.00088893	417.211170532991	75.762	0.40742	75.887	75.567	75.975	0.12545					14	11	2	0	0	0	0.4196	1	7035	7035		33.516	1.5607	1	28046			13330	9700	9152	9161	15337	15337					-0.014990327164809969
GTSTFALH	8	Unmodified	_GTSTFALH_					0	0	0		ENST00000293894.3_1_16:1035443-1035761:+|nuORF	ENST00000293894.3_1_16:1035443-1035761:+|nuORF	ENST00000293894.3_1_16:1035443-1035761:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	417.211235	832.407917	-0.26578	-0.00011089	6.075	0.0025346	5.8092	0.0024237	417.21288916265735	76.26	0.28753	76.211	75.991	76.279	-0.048264	0.16214	0.00012198	NaN	33.516	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36505			13331	9700	9152	9161							-0.014990327164809969
GTSVLKVTA	9	Unmodified	_GTSVLKVTA_					0	0	0		ENST00000502926.1_2_5:140806427-140807822:+|nuORF	ENST00000502926.1_2_5:140806427-140807822:+|nuORF	ENST00000502926.1_2_5:140806427-140807822:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2634582519531	2	438.263468	874.512382	0.15263	6.689E-05	-0.38156	-0.00016722	-0.22893	-0.00010033	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.7932	1	1980	1980		24.519	0	1	11370000			13332	12871	9153	9162	15338	15338					0.07010669040221273
GTVARPAW	8	Unmodified	_GTVARPAW_					0	0	0		ENST00000426537.1_1_21:47705768-47706077:-|nuORF	ENST00000426537.1_1_21:47705768-47706077:-|nuORF	ENST00000426537.1_1_21:47705768-47706077:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	429.23565673828125	2	429.235045	856.455536	-0.17888	-7.6781E-05	1.7289	0.00074211	1.55	0.00066533	429.2356452046458	63.375	2.3242	63.37	62.729	65.053	-0.0055504					274	88	5	0	0	0	0.87479	1	5902	5902		30.504	0	1	5346500			13333	11555	9154	9163	15339	15339					0.021566662743680354
GTVARWPG	8	Unmodified	_GTVARWPG_					0	0	0		ENST00000533107.3_1_19:1799652-1806029:-|nuORF	ENST00000533107.3_1_19:1799652-1806029:-|nuORF	ENST00000533107.3_1_19:1799652-1806029:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2286376953125	2	422.22722	842.439886	-1.5313	-0.00064655	3.5232	0.0014876	1.9919	0.00084104	422.228628241818	64.101	0.62197	64.101	63.67	64.292	0					53	29	2	0	0	0	0.85277	1	5640	5640		25.45	0	1	218720			13334	13392	9155	9164	15340	15340					0.012363797573243573
GTVARWPG	8	Unmodified	_GTVARWPG_					0	0	0		ENST00000533107.3_1_19:1799652-1806029:-|nuORF	ENST00000533107.3_1_19:1799652-1806029:-|nuORF	ENST00000533107.3_1_19:1799652-1806029:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.22784423828125	2	422.22722	842.439886	1.4046	0.00059308	0.57845	0.00024424	1.9831	0.00083732	422.2272983859282	64.331	2.0044	64.358	63.19	65.195	0.027138					107	65	3	0	0	0	0.87479	1	6085	6085		30.504	0	1	528250			13335	13392	9155	9164	15341	15341					0.012363797573243573
GTVFLVWTI	9	Unmodified	_GTVFLVWTI_					0	0	0		ENST00000586944.5_1_19:807712-810823:+|nuORF	ENST00000586944.5_1_19:807712-810823:+|nuORF	ENST00000586944.5_1_19:807712-810823:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2945556640625	2	518.29731	1034.58007	-0.11564	-5.9936E-05	-3.6356	-0.0018843	-3.7512	-0.0019443	518.29533424128	76.942	0.87077	77.51	77.308	78.179	0.56836					47	21	3	0	0	0	0.25483	1	8777	8777		68.787	5.253	1	1071400			13336	14181	9156	9165	15342	15342					0.06416118971060314
GTVIKLIR	8	Unmodified	_GTVIKLIR_					0	0	0			REV__nc|ENSG00000163605|Q9NY27-3|PPP4R2	REV__nc|ENSG00000163605|Q9NY27-3|PPP4R2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2743225097656	2	450.30547	898.596387	-1.7762	-0.00079981	-2.7896	-0.0012562	-4.5658	-0.002056	450.3040064157082	92.853	0.20467	93.046	92.862	93.067	0.19239					6	4	2	0	0	0	0.4196	1	9345	9345		18.324	0	1	90394	+		13337	20941	9157	9166	15343	15343					0.14303244927793912
GTVLIKKKLIL	11	Unmodified	_GTVLIKKKLIL_					0	0	0			REV__ENSG00000174776|ENST00000682715|WDR49	REV__ENSG00000174776|ENST00000682715|WDR49	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	409.2949523925781	3	409.29172	1224.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.655	1	18.722	18.222	19.222	0.066298								0	0	0	0.56276	1	362	362		3.4087	0.38274	1		+		13338	22012	9158	9167	15344	15344					0.24989722361260647
GTVLQQIPAPI	11	Unmodified	_GTVLQQIPAPI_					0	0	0			REV__ENSG00000066135|ENST00000372396|KDM4A	REV__ENSG00000066135|ENST00000372396|KDM4A	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8533325195312	2	568.837331	1135.66011	-0.36365	-0.00020686	-4.1467	-0.0023588	-4.5103	-0.0025656	568.8350191062464	102.58	0.40202	102.58	102.47	102.87	0					11	9	2	0	0	0	0.17383	1	10508	10508		39.253	0	1	557780	+		13339	16517	9159	9168	15345	15345					0.09770560574224874
GTVLQRLI	8	Unmodified	_GTVLQRLI_					0	0	0		nc|ENSG00000166025|Q8IY63-2|AMOTL1;ENSG00000166025|ENST00000433060|AMOTL1	nc|ENSG00000166025|Q8IY63-2|AMOTL1	nc|ENSG00000166025|Q8IY63-2|AMOTL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2743225097656	2	450.287277	898.560001	-1.7762	-0.0007998	2.023	0.00091091	0.24675	0.00011111	450.2874996386715	92.925	0.78508	93.117	92.82	93.605	0.19239					35	18	3	0	0	0	0.4196	1	9345	9345		19.36	1.0356	1	358260			13340	6151	9160	9169	15346	15346					0.10666368031081674
GTVLVRRNPIN	11	Unmodified	_GTVLVRRNPIN_					0	0	0			REV__ENST00000519719.1_1_5:162930400-162939205:+|nuORF	REV__ENST00000519719.1_1_5:162930400-162939205:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.86962890625	2	619.870028	1237.7255	0.62246	0.00038584	-1.8404	-0.0011408	-1.2179	-0.00075497	619.8687823008486	94.059	2.9324	94.104	92.154	95.087	0.045448					223	69	4	0	0	0	0.69995	1	9979	9979		31.53	1.2121	1	2371600	+		13341	16301	9161	9170	15347	15347					0.11614974819940471
GTVLVRRNPIN	11	Unmodified	_GTVLVRRNPIN_					0	0	0			REV__ENST00000519719.1_1_5:162930400-162939205:+|nuORF	REV__ENST00000519719.1_1_5:162930400-162939205:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8690185546875	2	619.870028	1237.7255	1.2648	0.00078404	-2.3923	-0.0014829	-1.1274	-0.00069886	619.86841143733	93.879	2.9041	94.108	92.241	95.145	0.22863					217	69	4	0	0	0	0.72739	1	9635	9635		27.047	2.5281	1	2572300	+		13342	16301	9161	9170	15348	15348					0.11614974819940471
GTVPNKRRV	9	Unmodified	_GTVPNKRRV_					0	0	0			REV__ENSG00000162409|ENST00000371244|PRKAA2	REV__ENSG00000162409|ENST00000371244|PRKAA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8089599609375	2	513.811982	1025.60941	-1.4445	-0.00074222	-4.4488	-0.0022859	-5.8934	-0.0030281	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.7932	1	3862	3862		23.042	2.0956	1	1675700	+		13343	20812	9162	9171	15349	15349					0.09763076039894258
GTVSQKGF	8	Unmodified	_GTVSQKGF_					0	0	0		ENST00000477791.5_1_2:47134810-47142912:-|nuORF	ENST00000477791.5_1_2:47134810-47142912:-|nuORF	ENST00000477791.5_1_2:47134810-47142912:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.219482421875	2	412.21906	822.423567	1.2472	0.00051414	0.02016	8.3105E-06	1.2674	0.00052245	412.21894629122863	34.843	0.97324	35.224	34.852	35.825	0.3812					45	24	3	0	0	0	0.94132	1	2638	2638		54.765	0	1	2148400			13344	12362	9163	9172	15350	15350					0.00525253800583414
GTYDAKVKK	9	Unmodified	_GTYDAKVKK_					0	0	0		ENSG00000159713|ENST00000393957|TPPP3	ENSG00000159713|ENST00000393957|TPPP3	ENSG00000159713|ENST00000393957|TPPP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.2835998535156	2	505.287474	1008.5604	0.38234	0.00019319	-0.069261	-3.4997E-05	0.31308	0.0001582	505.2871058988587	17.657	0.52114	17.175	16.898	17.419	-0.48256					30	11	4	0	0	0	0.039957	2	283	283;293		112.41	53.629	1	667610			13345	5544	9164	9173	15351;15352	15351					0.05645742960280131
GTYDAKVKK	9	Unmodified	_GTYDAKVKK_					0	0	0		ENSG00000159713|ENST00000393957|TPPP3	ENSG00000159713|ENST00000393957|TPPP3	ENSG00000159713|ENST00000393957|TPPP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.2856750488281	2	505.287474	1008.5604	0.92557	0.00046768	-0.74256	-0.00037521	0.18301	9.2473E-05	505.2867401779142	17.752	0.5279	17.131	16.919	17.447	-0.62141					30	13	3	0	0	0	0.045756	1	303	303		109.48	45.271	1	685860			13346	5544	9164	9173	15353	15353					0.05645742960280131
GTYENLIHVW	10	Unmodified	_GTYENLIHVW_					0	0	0		nc|ENSG00000131653|Q6Q0C0-2|TRAF7;ENSG00000131653|ENST00000326181|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	616.3094482421875	2	616.308938	1230.60332	-0.492	-0.00030322	0.90707	0.00055904	0.41507	0.00025581	616.3093842951916	76.62	0.71889	76.62	76.305	77.023	0					75	30	4	0	0	0	0.00030542	6	6992	6965;6970;6976;6983;6992;6999		143.89	64.174	1	340520			13347	3742	9165	9174	15354;15355;15356;15357;15358;15359	15358					-0.0027548698228656576
GTYQPLSTR	9	Unmodified	_GTYQPLSTR_					0	0	0		ENSG00000227057|ENST00000374617|WDR46;ENST00000489905.1_1_6:33248421-33255161:-|nuORF	ENSG00000227057|ENST00000374617|WDR46	ENSG00000227057|ENST00000374617|WDR46	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.7669677734375	2	511.766906	1021.51926	0.79066	0.00040463	-0.59269	-0.00030332	0.19797	0.00010131	511.7664442721747	35.043	0.76761	35.291	35.015	35.783	0.24769					49	19	4	0	0	0	0.045853	3	2637	2637;2650;2661		109.44	37.561	1	2080900			13348	8717	9166	9175	15360;15361;15362	15360					0.009359819207929831
GTYQPLSTR	9	Unmodified	_GTYQPLSTR_					0	0	0		ENSG00000227057|ENST00000374617|WDR46;ENST00000489905.1_1_6:33248421-33255161:-|nuORF	ENSG00000227057|ENST00000374617|WDR46	ENSG00000227057|ENST00000374617|WDR46	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.7676696777344	2	511.766906	1021.51926	1.7674	0.00090451	-1.3992	-0.00071607	0.36822	0.00018844	511.7660156552446	35.019	0.84863	35.4	34.977	35.825	0.3812					52	21	4	0	0	0	0.11874	3	2661	2651;2661;2674		89.029	26.138	1	2188600			13349	8717	9166	9175	15363;15364;15365	15364					0.009359819207929831
GTYSKIMNH	9	Unmodified	_GTYSKIMNH_					0	0	0		ENSG00000067900|ENST00000399799|ROCK1	ENSG00000067900|ENST00000399799|ROCK1	ENSG00000067900|ENST00000399799|ROCK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.75537109375	2	525.755484	1049.49641	-0.36914	-0.00019408	0.61701	0.0003244	0.24787	0.00013032	525.7556472607403	29.512	0.91131	29.483	29.127	30.039	-0.029207					47	20	4	0	0	0	2.6378E-08	3	1881	1856;1867;1881		157.33	77.616	1	656460			13350	1191	9167	9176	15366;15367;15368	15368					-0.026353604683208687
GTYSKIMNH	9	Unmodified	_GTYSKIMNH_					0	0	0		ENSG00000067900|ENST00000399799|ROCK1	ENSG00000067900|ENST00000399799|ROCK1	ENSG00000067900|ENST00000399799|ROCK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7552490234375	2	525.755484	1049.49641	0.57881	0.00030431	-0.53884	-0.0002833	0.039965	2.1012E-05	525.7550294102673	29.686	0.68549	29.596	29.319	30.004	-0.089544					38	15	3	0	0	0	6.1523E-05	3	1904	1892;1904;1917		148.04	51.853	1	827350			13351	1191	9167	9176	15369;15370;15371	15370					-0.026353604683208687
GTYTGVHL	8	Unmodified	_GTYTGVHL_					0	0	0			REV__ENST00000497526.1_1_2:113482708-113488660:+|nuORF	REV__ENST00000497526.1_1_2:113482708-113488660:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.2186279296875	2	424.21906	846.423567	-1.7078	-0.00072449	0.68599	0.00029101	-1.0218	-0.00043348	424.2192991334227	101.86	1.3095	102.06	101.54	102.85	0.19484					57	31	2	0	0	0	0.90465	1	10726	10726		40.573	3.4135	1	1022300	+		13352	19874	9168	9177	15372	15372					-0.005787461994373189
GTYVKPLSNK	10	Unmodified	_GTYVKPLSNK_					0	0	0		ENST00000589744.1_1_17:73949530-73951667:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1;ENSG00000161533|ENST00000293217|ACOX1	ENST00000589744.1_1_17:73949530-73951667:-|nuORF	ENST00000589744.1_1_17:73949530-73951667:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8135375976562	2	553.813856	1105.61316	-0.54899	-0.00030404	0.73651	0.00040789	0.18752	0.00010385	553.8141037249087	27.065	0.75811	26.889	26.523	27.281	-0.17559					35	16	3	0	0	0	0.34329	1	1541	1541		68.846	21.189	1	438870			13353	5638	9169	9178	15373	15373					0.06457701023077789
GTYVKPLSNK	10	Unmodified	_GTYVKPLSNK_					0	0	0		ENST00000589744.1_1_17:73949530-73951667:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1;ENSG00000161533|ENST00000293217|ACOX1	ENST00000589744.1_1_17:73949530-73951667:-|nuORF	ENST00000589744.1_1_17:73949530-73951667:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8134765625	2	553.813856	1105.61316	1.609	0.00089111	-1.8587	-0.0010293	-0.24962	-0.00013824	553.8127492641156	27.044	0.65302	26.703	26.414	27.067	-0.34035					37	14	3	0	0	0	0.26675	2	1544	1534;1544		76.17	17.388	1	354900			13354	5638	9169	9178	15374;15375	15375					0.06457701023077789
GTYVKPLSNK	10	Unmodified	_GTYVKPLSNK_					0	0	0		ENST00000589744.1_1_17:73949530-73951667:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1;ENSG00000161533|ENST00000293217|ACOX1	ENST00000589744.1_1_17:73949530-73951667:-|nuORF	ENST00000589744.1_1_17:73949530-73951667:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	553.813856	1105.61316	0.72701	0.00040263	1.2958	0.00071762	2.0228	0.0011203	553.8161336077743	27.094	0.11104	27.122	27.069	27.18	0.028172	0.21731	0.0013809	NaN	76.17	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37412			13355	5638	9169	9178							0.06457701023077789
GTYVSSVPR	9	Unmodified	_GTYVSSVPR_					0	0	0		ENST00000485901.1_1_6:32974617-32975137:-|nuORF;ENSG00000204252|ENST00000229829|HLA-DOA	ENST00000485901.1_1_6:32974617-32975137:-|nuORF	ENST00000485901.1_1_6:32974617-32975137:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2560729980469	2	483.256174	964.497795	0.7858	0.00037974	-0.60357	-0.00029168	0.18223	8.8064E-05	483.2558668332543	35.889	1.3517	36.137	35.707	37.059	0.24769					82	33	4	0	0	0	0.0010652	6	2759	2759;2767;2779;2791;2804;2818		145.16	73.86	1	11949000			13356	12569	9170	9179	15376;15377;15378;15379;15380;15381	15376					0.01412596892100737
GTYVSSVPR	9	Unmodified	_GTYVSSVPR_					0	0	0		ENST00000485901.1_1_6:32974617-32975137:-|nuORF;ENSG00000204252|ENST00000229829|HLA-DOA	ENST00000485901.1_1_6:32974617-32975137:-|nuORF	ENST00000485901.1_1_6:32974617-32975137:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.2562561035156	2	483.256174	964.497795	1.052	0.00050837	-0.91577	-0.00044255	0.1362	6.5818E-05	483.25573453788144	35.836	1.32	36.277	35.959	37.279	0.44043					82	32	5	0	0	0	0.0062975	6	2779	2770;2779;2791;2804;2816;2831		136.27	69.839	1	13156000			13357	12569	9170	9179	15382;15383;15384;15385;15386;15387	15383					0.01412596892100737
GVADKILKK	9	Unmodified	_GVADKILKK_					0	0	0		ENSG00000123609|ENST00000243346|NMI	ENSG00000123609|ENST00000243346|NMI	ENSG00000123609|ENST00000243346|NMI	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.3146057128906	2	486.316035	970.617516	-0.82294	-0.00040021	0.79109	0.00038472	-0.031854	-1.5491E-05	486.31625892751134	28.958	0.90391	28.929	28.525	29.429	-0.029207					51	20	4	0	0	0	0.051853	2	1780	1780;1792		107.01	24.827	1	1051500			13358	3285	9171	9180	15388;15389	15388					0.13103210236658924
GVADKILKK	9	Unmodified	_GVADKILKK_					0	0	0		ENSG00000123609|ENST00000243346|NMI	ENSG00000123609|ENST00000243346|NMI	ENSG00000123609|ENST00000243346|NMI	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.3150939941406	2	486.316035	970.617516	0.52122	0.00025348	-0.67123	-0.00032643	-0.15001	-7.2953E-05	486.31556932624306	29.087	0.90394	28.914	28.631	29.535	-0.17336					52	20	4	0	0	0	0.017216	2	1833	1820;1833		127.46	28.981	1	1161500			13359	3285	9171	9180	15390;15391	15391					0.13103210236658924
GVAESEKP	8	Unmodified	_GVAESEKP_					0	0	0		ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.9342346191406	2	408.708525	815.402498	0.012695	5.1887E-06	2.1615	0.00088344	2.1742	0.00088863	408.70928758042237	16.435	0.1567	16.494	16.417	16.574	0.059269					8	5	2	0	0	0	0.4196	1	147	147		18.324	0	1	82823			13360	8672	9172	9181	15392	15392					-0.012587562989438084
GVAFRGLK	8	Unmodified	_GVAFRGLK_					0	0	0		ENSG00000175093|ENST00000310546|SPSB4;ENSG00000171621|ENST00000328089|SPSB1	ENSG00000175093|ENST00000310546|SPSB4	ENSG00000175093|ENST00000310546|SPSB4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.8982849121094	2	424.261062	846.507572	0.96861	0.00041094	-3.5508	-0.0015065	-2.5822	-0.0010955	424.2589430939048	28.566	1.0703	28.392	28.122	29.192	-0.17336					36	25	2	0	0	0	0.4196	1	1799	1799		14.664	10.679	1	55342			13361	6690	9173	9182	15393	15393					0.07817829688133315
GVAFVRFT	8	Unmodified	_GVAFVRFT_					0	0	0			REV__ENST00000382496.9_1_5:9041100-9041304:-|nuORF	REV__ENST00000382496.9_1_5:9041100-9041304:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.7364501953125	2	448.75307	895.491587	-0.2323	-0.00010425	0.8409	0.00037736	0.6086	0.00027311	448.75286868262657	54.605	0.5037	55.011	54.74	55.244	0.40663					18	11	2	0	0	0	0.4196	1	5580	5580		18.324	5.3652	1	264420	+		13362	25980	9174	9183	15394	15394					0.03966123451232306
GVAGAALLLVH	11	Unmodified	_GVAGAALLLVH_					0	0	0		nc|ENSG00000090932|Q9NYJ7|DLL3;ENSG00000090932|ENST00000356433|DLL3	nc|ENSG00000090932|Q9NYJ7|DLL3	nc|ENSG00000090932|Q9NYJ7|DLL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8131103515625	2	510.813659	1019.61277	0.55381	0.0002829	-2.2532	-0.001151	-1.6994	-0.00086807	510.8124157533129	80.736	1.2851	81.262	80.695	81.98	0.52676					56	30	3	0	0	0	0.63354	1	9294	9294		40.573	7.7602	1	1223300			13363	1661	9175	9184	15395	15395					0.10374326093904074
GVAGAALLLVH	11	Unmodified	_GVAGAALLLVH_					0	0	0		nc|ENSG00000090932|Q9NYJ7|DLL3;ENSG00000090932|ENST00000356433|DLL3	nc|ENSG00000090932|Q9NYJ7|DLL3	nc|ENSG00000090932|Q9NYJ7|DLL3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	510.813659	1019.61277	0.63412	0.00032392	-1.7074	-0.00087214	-1.0732	-0.00054823	510.8122668312753	81.009	0.54474	81.153	80.737	81.282	0.14352	-0.068164	0.00043389	NaN	40.573	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43774			13364	1661	9175	9184							0.10374326093904074
GVAGEKGST	9	Unmodified	_GVAGEKGST_					0	0	0		ENST00000489611.5_1_6:70926602-70990065:-|nuORF;nc|ENSG00000112280|P20849-2|COL9A1;ENSG00000112280|ENST00000357250|COL9A1	ENST00000489611.5_1_6:70926602-70990065:-|nuORF	ENST00000489611.5_1_6:70926602-70990065:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.2084655761719	2	403.20615	804.397747	2.9266	0.00118	4.1333	0.0016666	7.0599	0.0028466	403.2077473802554	85.716	2.0213	85.774	85.282	87.304	0.057899					111	46	4	0	0	0	0.7932	1	8787	8787		21.96	0.25755	1	1450600			13365	2648	9176	9185	15396	15396					-0.012276404416979858
GVAGMLGLPP	10	Unmodified	_GVAGMLGLPP_					0	0	0			REV__ENST00000597434.5_2_19:49127515-49127686:+|nuORF	REV__ENST00000597434.5_2_19:49127515-49127686:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.75665283203125	2	456.254588	910.494624	-1.6868	-0.0007696	-2.1175	-0.00096613	-3.8043	-0.0017357	456.2528624469303	52.407	1.3098	52.407	51.831	53.141	0					69	34	3	0	0	0	0.85976	1	4303	4303		35.201	6.9464	1	84817	+		13366	29267	9177	9186	15397	15397					0.03579630513718257
GVAGRHLLH	9	Unmodified	_GVAGRHLLH_					0	0	0		ENST00000372429.7_1_9:132637899-132641867:+|nuORF	ENST00000372429.7_1_9:132637899-132641867:+|nuORF	ENST00000372429.7_1_9:132637899-132641867:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.280517578125	2	480.280318	958.546083	2.5491	0.0012243	-1.7452	-0.00083817	0.80389	0.00038609	480.27933712868145	99.942	0.96339	99.888	99.524	100.49	-0.053741					33	21	2	0	0	0	0.76402	1	10837	10837		35.201	6.9464	1	200640			13367	10699	9178	9187	15398	15398					0.06515135322649712
GVAGRHLLH	9	Unmodified	_GVAGRHLLH_					0	0	0		ENST00000372429.7_1_9:132637899-132641867:+|nuORF	ENST00000372429.7_1_9:132637899-132641867:+|nuORF	ENST00000372429.7_1_9:132637899-132641867:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.281494140625	2	480.280318	958.546083	1.0992	0.00052791	0.18402	8.8382E-05	1.2832	0.00061629	480.2802815297023	99.288	1.3371	99.651	99.251	100.59	0.36292					88	33	4	0	0	0	0.32449	1	12061	12061		62.978	7.4742	1	8963900			13368	10699	9178	9187	15399	15399					0.06515135322649712
GVAHPPPAV	9	Unmodified	_GVAHPPPAV_					0	0	0		ENST00000368491.7_2_6:118972582-118972996:-|nuORF	ENST00000368491.7_2_6:118972582-118972996:-|nuORF	ENST00000368491.7_2_6:118972582-118972996:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.7486267089844	2	422.73742	843.460287	-0.97073	-0.00041036	2.0778	0.00087837	1.1071	0.00046801	422.738062121724	39.097	0.93481	39.651	38.943	39.878	0.55449					25	21	2	0	0	0	0.20789	1	3191	3191		21.702	8.7432	1	60944			13369	10597	9179	9188	15400	15400					0.03229550417131577
GVAILSPLL	9	Unmodified	_GVAILSPLL_					0	0	0		ENSG00000103540|ENST00000694978|CCP110;nc|ENSG00000103540|O43303|CCP110	ENSG00000103540|ENST00000694978|CCP110	ENSG00000103540|ENST00000694978|CCP110	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7875061035156	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.7932	1	3183	3183		20.482	4.0087	1	403970			13370	2090	9180	9189	15401	15401					0.11308733942325944
GVALLITSV	9	Unmodified	_GVALLITSV_					0	0	0		ENSG00000179615|ENST00000641114|OR2AP1	ENSG00000179615|ENST00000641114|OR2AP1	ENSG00000179615|ENST00000641114|OR2AP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.7734680175781	2	436.776211	871.537869	-1.6287	-0.0007114	-3.9688	-0.0017335	-5.5976	-0.0024449	436.7743504876495	26.927	0.91903	26.994	26.723	27.642	0.066877					84	43	3	0	0	0	0.7932	1	1061	1061		19.36	1.0356	1	198510			13371	7283	9181	9190	15402	15402					0.0969614356265538
GVALLKLV	8	Unmodified	_GVALLKLV_					0	0	0			REV__ENST00000489520.2_1_12:66152652-66152778:-|nuORF	REV__ENST00000489520.2_1_12:66152652-66152778:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7841796875	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.80963	1	1667	1667		15.636	0	1	1879900	+		13372	27619	9182	9191	15403	15403					0.13981055150497923
GVALRMKRTRR	11	Unmodified	_GVALRMKRTRR_					0	0	0			REV__ENST00000474287.5_1_3:133465176-133472639:+|nuORF	REV__ENST00000474287.5_1_3:133465176-133472639:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.9427795410156	3	448.61034	1342.80919	-1.3856	-0.00062161	-0.93446	-0.00041921	-2.3201	-0.0010408	448.609746420413	76.801	0.97182	76.89	76.464	77.435	0.089363					88	45	3	0	0	0	0.71803	1	7182	7182		28.577	7.7396	1	651130	+		13373	27297	9183	9192	15404	15404					0.15149807715988572
GVAMIRFI	8	Unmodified	_GVAMIRFI_					0	0	0		ENST00000597421.1_1_19:47349063-47354074:-|nuORF	ENST00000597421.1_1_19:47349063-47354074:-|nuORF	ENST00000597421.1_1_19:47349063-47354074:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.76617431640625	2	453.765123	905.515694	0.25664	0.00011645	1.276	0.00057901	1.5326	0.00069546	453.7655790571442	42.641	1.9691	42.612	42.161	44.13	-0.029461					74	47	2	0	0	0	0.86791	1	3160	3160		28.254	6.5519	1	288700			13374	14356	9184	9193	15405	15405					0.0591564061326153
GVAMPLDLAI	10	Unmodified	_GVAMPLDLAI_					0	0	0			REV__ENSG00000136546|ENST00000643258|SCN7A	REV__ENSG00000136546|ENST00000643258|SCN7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.2837219238281	2	500.280803	998.547053	1.0321	0.00051632	3.7048	0.0018534	4.7369	0.0023698	500.28261243239	16.642	0.34256	16.72	16.609	16.951	0.07715					14	11	2	0	0	0	0.86718	1	123	123		27.882	1.0861	1	21753	+		13375	19320	9185	9194	15406	15406					0.04772168856675307
GVANALAHKYH	11	Unmodified	_GVANALAHKYH_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8155517578125	2	590.814722	1179.61489	-0.47583	-0.00028113	-0.20212	-0.00011941	-0.67795	-0.00040054	590.8146636802912	49.04	1.1924	49.035	48.561	49.754	-0.0056419					55	26	3	0	0	0	0.5603	1	4072	4072		47.657	6.8792	1	226240			13376	8826	9186	9195	15407	15407					0.03226754831712242
GVANALAHKYH	11	Unmodified	_GVANALAHKYH_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8135986328125	2	590.814722	1179.61489	-0.13818	-8.1639E-05	-0.65007	-0.00038407	-0.78825	-0.00046571	590.8145155647071	49.179	1.2352	49.155	48.575	49.811	-0.024033					60	27	4	0	0	0	0.31674	1	4204	4204		71.877	30.451	1	193980			13377	8826	9186	9195	15408	15408					0.03226754831712242
GVANALAHKYH	11	Unmodified	_GVANALAHKYH_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.815185546875	2	590.814722	1179.61489	-1.6369	-0.00096708	1.6595	0.00098045	0.02262	1.3364E-05	590.8153890647844	49.273	0.97068	49.273	48.881	49.852	0.00016785					38	21	2	0	0	0	0.48529	1	4141	4141		52.937	10.072	1	195470			13378	8826	9186	9195	15409	15409					0.03226754831712242
GVARLGRA	8	Unmodified	_GVARLGRA_					0	0	0			REV__nc|ENSG00000213638|Q96EY9|ADAT3	REV__nc|ENSG00000213638|Q96EY9|ADAT3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5843505859375	2	400.248486	798.48242	2.8149	0.0011266	-2.0128	-0.0008056	0.80212	0.00032105	400.24758038028125	25.002	0.86704	24.965	24.581	25.448	-0.037176					34	22	2	0	0	0	0.4196	1	923	923		13.775	4.3048	1	108830	+		13379	23626	9187	9196	15410	15410					0.07511774885563227
GVAVGGPLW	9	Unmodified	_GVAVGGPLW_					0	0	0		nc|ENSG00000214357|A8MQ27-3|NEURL1B;ENSG00000214357|ENST00000369800|NEURL1B	nc|ENSG00000214357|A8MQ27-3|NEURL1B	nc|ENSG00000214357|A8MQ27-3|NEURL1B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2615051269531	2	428.239796	854.465038	-0.17887	-7.66E-05	-1.4085	-0.00060317	-1.5874	-0.00067977	428.2388536437675	90.794	0.20273	90.864	90.681	90.884	0.069328					7	4	2	0	0	0	0.20789	1	9304	9304		14.664	0	1	151730			13380	8624	9188	9197	15411	15411					0.03198434559908492
GVAVGKPWR	9	Unmodified	_GVAVGKPWR_					0	0	0		ENST00000574946.5_1_17:6025924-6026050:+|nuORF	ENST00000574946.5_1_17:6025924-6026050:+|nuORF	ENST00000574946.5_1_17:6025924-6026050:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	485.2849426269531	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.9	1	58.9	58.4	59.4	0								0	0	0	0.30053	1	5115	5115		30.504	4.9296	1				13381	14040	9189	9198	15412	15412					0.07004903608174118
GVAVKLIL	8	Unmodified	_GVAVKLIL_					0	0	0			REV__nc|ENSG00000120341|Q96JE7-3|SEC16B	REV__nc|ENSG00000120341|Q96JE7-3|SEC16B	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7852478027344	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.161	1	31.241	30.741	31.741	0.079834								0	0	0	0.31173	1	2089	2089		9.4706	0	1		+		13382	25084	9190	9199	15413	15413					0.13981055150509292
GVAVKVAQFV	10	Unmodified	_GVAVKVAQFV_					0	0	0			REV__ENSG00000168453|ENST00000381418|HR	REV__ENSG00000168453|ENST00000381418|HR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.3062438964844	2	509.30821	1016.60187	-0.80877	-0.00041191	-3.7898	-0.0019302	-4.5986	-0.0023421	509.30614096875837	93.406	1.6722	93.406	92.938	94.61	0					114	38	4	0	0	0	0.85934	1	9172	9172		35.618	1.4457	1	1703100	+		13383	21489	9191	9200	15414	15414					0.09422923719603205
GVAVKVAQFV	10	Unmodified	_GVAVKVAQFV_					0	0	0			REV__ENSG00000168453|ENST00000381418|HR	REV__ENSG00000168453|ENST00000381418|HR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.3057861328125	2	509.30821	1016.60187	-1.5847	-0.00080708	-3.0566	-0.0015567	-4.6412	-0.0023638	509.30651405671495	92.924	1.4274	93.116	92.648	94.076	0.19238					107	33	5	0	0	0	0.85934	2	9414	9402;9414		35.618	6.4687	1	2014700	+		13384	21489	9191	9200	15415;15416	15416					0.09422923719603205
GVAVMKLFNKA	11	Unmodified	_GVAVMKLFNKA_					0	0	0		ENSG00000183856|ENST00000361170|IQGAP3	ENSG00000183856|ENST00000361170|IQGAP3	ENSG00000183856|ENST00000361170|IQGAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3441162109375	2	589.341726	1176.6689	0.83312	0.00049099	1.1429	0.00067355	1.976	0.0011645	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.72918	1	9981	9981		26.693	5.0072	1	20363000			13385	7567	9192	9201	15417	15417					0.08763210939059718
GVAYLHGKL	9	Unmodified	_GVAYLHGKL_					0	0	0			REV__ENSG00000198642|ENST00000359039|KLHL9	REV__ENSG00000198642|ENST00000359039|KLHL9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2775573730469	2	479.279452	956.544351	-1.0919	-0.00052333	-3.0273	-0.0014509	-4.1192	-0.0019742	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.78058	1	8229	8229		30.504	3.7075	1	4644500	+		13386	23349	9193	9202	15418	15418					0.0643408151404401
GVCKLPLN	8	Unmodified	_GVCKLPLN_					0	0	0		ENSG00000157680|ENST00000614521|DGKI;nc|ENSG00000157680|O75912|DGKI	ENSG00000157680|ENST00000614521|DGKI	ENSG00000157680|ENST00000614521|DGKI	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.7650451660156	2	422.241481	842.468409	1.1025	0.00046552	3.632	0.0015336	4.7345	0.0019991	422.2428965120187	20.892	0.48069	20.433	20.192	20.672	-0.4591					18	11	2	0	0	0	0.4196	1	724	724		25.45	0	1	53052			13387	5445	9194	9203	15419	15419					0.04087361342249096
GVDFLRFH	8	Unmodified	_GVDFLRFH_					0	0	0			REV__nc|ENSG00000087258|P09471-2|GNAO1	REV__nc|ENSG00000087258|P09471-2|GNAO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.7594299316406	2	495.761426	989.5083	-1.9425	-0.00096301	-1.2609	-0.00062509	-3.2034	-0.0015881	495.7602537576442	19.302	1.1114	19.302	18.834	19.945	0					76	43	2	0	0	0	0.89457	1	416	416		37.028	4.2161	1	56551	+		13388	16928	9195	9204	15420	15420					0.013126243371971213
GVDLRLRQKLK	11	Unmodified	_GVDLRLRQKLK_					0	0	0			REV__nc|ENSG00000135317|Q9Y5W7-2|SNX14	REV__nc|ENSG00000135317|Q9Y5W7-2|SNX14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.6181640625	3	442.617377	1324.8303	-1.5272	-0.00067598	1.0452	0.0004626	-0.48209	-0.00021338	442.61773741060756	16.088	0.1948	16.136	16.008	16.203	0.047802					16	8	3	0	0	0	0.76251	1	116	116		19.263	2.0959	1	112380	+		13389	29863	9196	9205	15421	15421					0.1808809629649204
GVDPNTIT	8	Unmodified	_GVDPNTIT_					0	0	0			REV__ENSG00000130340|ENST00000392185|SNX9	REV__ENSG00000130340|ENST00000392185|SNX9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9329833984375	2	408.708525	815.402498	0.46177	0.00018873	2.3061	0.00094254	2.7679	0.0011313	408.70934247941716	16.505	0.19556	16.481	16.354	16.55	-0.024033					14	8	2	0	0	0	0.4196	1	140	140		20.947	0	1	70176	+		13390	18868	9197	9206	15422	15422					-0.01258756298955177
GVDRLQAELPE	11	Unmodified	_GVDRLQAELPE_					0	0	0		ENST00000530857.1_1_17:72959162-72968794:-|nuORF;ENST00000425042.6_1_17:72960710-72968794:-|nuORF	ENST00000530857.1_1_17:72959162-72968794:-|nuORF	ENST00000530857.1_1_17:72959162-72968794:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.880615234375	3	409.550698	1225.63027	-2.1104	-0.00086431	0.3766	0.00015424	-1.7338	-0.00071007	409.5506970055622	24.308	0.36562	24.308	24.1	24.466	0					26	14	2	0	0	0	0.17334	1	830	830		16.53	0	1	21555			13391	11525	9198	9207	15423	15423					0.02647576838239729
GVEFVNNTG	9	Unmodified	_GVEFVNNTG_					0	0	0			REV__ENST00000522540.5_1_8:30013899-30034753:+|nuORF	REV__ENST00000522540.5_1_8:30013899-30034753:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.7220458984375	2	468.724707	935.43486	-1.0178	-0.00047706	-2.1381	-0.0010022	-3.1559	-0.0014793	468.72367977500755	69.802	1.0969	69.938	69.737	70.834	0.13506					82	54	2	0	0	0	0.76764	1	6357	6357		34.173	5.023	1	1482700	+		13392	17466	9199	9208	15424	15424					-0.03543968895939997
GVELTVPE	8	Unmodified	_GVELTVPE_					0	0	0			REV__ENSG00000175595|ENST00000311895|ERCC4	REV__ENSG00000175595|ENST00000311895|ERCC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2275390625	2	422.226551	842.438549	0.40511	0.00017105	3.1892	0.0013466	3.5943	0.0015176	422.2277865836404	64.332	1.1229	64.456	64.031	65.154	0.12397					101	41	4	0	0	0	0.9295	1	5625	5625		55.504	3.205	1	502100	+		13393	22076	9200	9209	15425	15425					0.011027008779137759
GVEVKDVK	8	Unmodified	_GVEVKDVK_					0	0	0		ENSG00000253506|ENST00000521764|NACA2	ENSG00000253506|ENST00000521764|NACA2	ENSG00000253506|ENST00000521764|NACA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77166748046875	2	437.255643	872.496732	-0.68714	-0.00030045	1.06	0.0004635	0.37289	0.00016305	437.25591619112566	38.587	0.7284	38.929	38.379	39.107	0.34187					27	17	2	0	0	0	0.4196	1	3134	3134		24.203	0	1	118640			13394	8860	9201	9210	15426	15426					0.05538382523184282
GVFEETGSPW	10	Unmodified	_GVFEETGSPW_					0	0	0		ENST00000479665.5_2_3:28390190-28390412:-|nuORF	ENST00000479665.5_2_3:28390190-28390412:-|nuORF	ENST00000479665.5_2_3:28390190-28390412:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.25341796875	2	554.750921	1107.48729	-0.80498	-0.00044656	0.95223	0.00052825	0.14726	8.1691E-05	554.7513496792534	77.343	0.54901	77.343	77.182	77.731	0					50	28	2	0	0	0	0.19278	5	7066	7059;7062;7066;7070;7072		87.754	31.112	1	303800			13395	12416	9202	9211	15427;15428;15429;15430;15431	15429					-0.06215430552970247
GVFEPIMGF	9	Unmodified	_GVFEPIMGF_					0	0	0			REV__ENSG00000166855|ENST00000300107|CLPX	REV__ENSG00000166855|ENST00000300107|CLPX	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.95147705078125	2	498.746596	995.478639	-0.23102	-0.00011522	3.1566	0.0015743	2.9256	0.0014591	498.74805845953625	24.37	0.34048	24.324	24.117	24.458	-0.04598					9	6	2	0	0	0	0.20789	1	931	931		31.955	5.2619	1	16014	+		13396	21331	9203	9212	15432	15432					-0.01928075723162692
GVGAGTRDAR	10	Unmodified	_GVGAGTRDAR_					0	0	0			REV__ENST00000566352.1_1_16:57220430-57238448:+|nuORF	REV__ENST00000566352.1_1_16:57220430-57238448:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.3205261230469	2	480.254497	958.494441	-0.36627	-0.0001759	3.3166	0.0015928	2.9504	0.0014169	480.2560027954903	59.316	1.0221	59.707	59.232	60.254	0.39077					31	24	2	0	0	0	0.37624	1	6210	6210		37.812	8.662	1	689910	+		13397	28425	9204	9213	15433	15433					0.01353346838084235
GVGALTHLL	9	Unmodified	_GVGALTHLL_					0	0	0		nc|ENSG00000140691|Q96C12-2|ARMC5;ENSG00000140691|ENST00000268314|ARMC5;ENST00000457010.6_2_16:31477148-31477304:+|nuORF;nc|ENSG00000140691|Q96C12-3|ARMC5	nc|ENSG00000140691|Q96C12-2|ARMC5	nc|ENSG00000140691|Q96C12-2|ARMC5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.7661437988281	2	440.766178	879.517802	0.20273	8.9357E-05	-0.61968	-0.00027313	-0.41695	-0.00018378	440.76612269748716	18.185	0.78542	17.708	17.198	17.983	-0.47694					39	16	4	0	0	0	0.7932	1	381	381		26.796	0	1	160700			13398	4453	9205	9214	15434	15434					0.07322392622711504
GVGAVLLLP	9	Unmodified	_GVGAVLLLP_					0	0	0		ENST00000602385.1_1_3:169482740-169482830:-|nuORF	ENST00000602385.1_1_3:169482740-169482830:-|nuORF	ENST00000602385.1_1_3:169482740-169482830:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77496337890625	2	419.773471	837.53239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.271	1	52.247	51.747	52.747	-0.023849								0	0	0	0.32542	1	4614	4614		21.702	0	1				13399	14403	9206	9215	15435	15435					0.10712464770847419
GVGFVVLGKH	10	Unmodified	_GVGFVVLGKH_					0	0	0			REV__ENSG00000165794|ENST00000298681|SLC39A2	REV__ENSG00000165794|ENST00000298681|SLC39A2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.80352783203125	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.931	1	42.937	42.437	43.437	0.0057487								0	0	0	0.45132	1	2923	2923		23.042	0	1		+		13400	21217	9207	9216	15436	15436					0.0812205692243424
GVGGPPCR	8	Carbamidomethyl (C)	_GVGGPPC(Carbamidomethyl (C))R_	GVGGPPC(1)R		GVGGPPC(47)R		0	1	0			REV__ENST00000593256.6_2_19:11456822-11456954:-|nuORF	REV__ENST00000593256.6_2_19:11456822-11456954:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	400.19708251953125	2	400.197605	798.380657	-1.2559	-0.00050262	-3.5399	-0.0014167	-4.7958	-0.0019193	400.19654936320705	82.902	0.71272	82.902	82.649	83.362	0					40	17	3	0	0	0	0.92176	1	7772	7772		46.766	9.738	1	809630	+		13401	29226	9208	9217	15437	15437	353				-0.02659839528496377
GVGGPPCR	8	Carbamidomethyl (C)	_GVGGPPC(Carbamidomethyl (C))R_	GVGGPPC(1)R		GVGGPPC(57)R		0	1	0			REV__ENST00000593256.6_2_19:11456822-11456954:-|nuORF	REV__ENST00000593256.6_2_19:11456822-11456954:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.1957092285156	2	400.197605	798.380657	-1.7396	-0.00069617	-3.5703	-0.0014288	-5.3099	-0.002125	400.1964299805563	82.569	1.537	82.695	82.281	83.818	0.12601					84	35	4	0	0	0	0.89567	1	7913	7913		57.453	12.922	1	5438900	+		13402	29226	9208	9217	15438	15438	353				-0.02659839528496377
GVGGPPCR	8	Carbamidomethyl (C)	_GVGGPPC(Carbamidomethyl (C))R_	GVGGPPC(1)R		GVGGPPC(57)R		0	1	0			REV__ENST00000593256.6_2_19:11456822-11456954:-|nuORF	REV__ENST00000593256.6_2_19:11456822-11456954:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1969909667969	2	400.197605	798.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.764	1	86.207	85.707	86.707	0.44331								0	0	0	0.27203	1	10024	10024		57.453	12.922	1		+		13403	29226	9208	9217	15439	15439	353				-0.02659839528496377
GVGGPPCR	8	Carbamidomethyl (C)	_GVGGPPC(Carbamidomethyl (C))R_	GVGGPPC(1)R		GVGGPPC(60)R		0	1	0			REV__ENST00000593256.6_2_19:11456822-11456954:-|nuORF	REV__ENST00000593256.6_2_19:11456822-11456954:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.19635009765625	2	400.197605	798.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.482	1	81.981	81.481	82.481	0.49967								0	0	0	0.21147	1	9424	9424		60.404	15.873	1		+		13404	29226	9208	9217	15440	15440	353				-0.02659839528496377
GVGGRRRG	8	Unmodified	_GVGGRRRG_					0	0	0			REV__ENST00000372902.3_1_X:100603579-100603852:-|nuORF	REV__ENST00000372902.3_1_X:100603579-100603852:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.9211730957031	2	407.74136	813.468167	2.8205	0.0011501	-1.3357	-0.00054463	1.4848	0.00060542	407.7407169928596	24.586	0.77704	24.549	24.297	25.074	-0.037176					26	16	2	0	0	0	0.4196	1	890	890		20.482	0	1	41810	+		13405	25738	9209	9218	15441	15441					0.05397122457270598
GVGGRRRG	8	Unmodified	_GVGGRRRG_					0	0	0			REV__ENST00000372902.3_1_X:100603579-100603852:-|nuORF	REV__ENST00000372902.3_1_X:100603579-100603852:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	407.74136	813.468167	-2.1134	-0.00086171	3.0859	0.0012582	0.9725	0.00039653	407.7424950150521	24.105	0.69198	24.105	23.792	24.484	0	-0.12214	0.00092695	NaN	20.482	46	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60661	+		13406	25738	9209	9218							0.05397122457270598
GVGGRRRG	8	Unmodified	_GVGGRRRG_					0	0	0			REV__ENST00000372902.3_1_X:100603579-100603852:-|nuORF	REV__ENST00000372902.3_1_X:100603579-100603852:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	407.74136	813.468167	-0.37225	-0.00015178	1.4322	0.00058398	1.06	0.0004322	407.74190511443413	24.499	0.85135	24.453	24.167	25.018	-0.04598	0.22667	-0.00042157	NaN	20.482	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42561	+		13407	25738	9209	9218							0.05397122457270598
GVGGRRRG	8	Unmodified	_GVGGRRRG_					0	0	0			REV__ENST00000372902.3_1_X:100603579-100603852:-|nuORF	REV__ENST00000372902.3_1_X:100603579-100603852:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	407.74136	813.468167	0.040005	1.6312E-05	1.0255	0.00041815	1.0655	0.00043446	407.7417533677004	23.819	0.51098	23.913	23.636	24.147	0.0945	-0.31355	-0.00075322	NaN	20.482	39	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61233	+		13408	25738	9209	9218							0.05397122457270598
GVGIEPRRG	9	Unmodified	_GVGIEPRRG_					0	0	0			REV__ENSG00000187658|ENST00000409999|C5orf52	REV__ENSG00000187658|ENST00000409999|C5orf52	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7686767578125	2	470.769783	939.525013	-0.63239	-0.00029771	-1.0756	-0.00050635	-1.708	-0.00080406	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.55097	1	4768	4768		49.442	7.0454	1	1468500	+		13409	22930	9210	9219	15442	15442					0.05283125223149909
GVGIKNEARVR	11	Unmodified	_GVGIKNEARVR_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.23919677734375	3	400.238678	1197.6942	1.8951	0.00075847	-0.6753	-0.00027028	1.2197	0.00048819	400.2383943894667	17.925	0.51234	17.442	17.232	17.744	-0.48256					16	10	2	0	0	0	0.72374	1	330	330		27.644	2.5179	1	283060	+		13410	20437;29946	9211	9220	15443	15443					0.10326401785823691
GVGKAGVSPKQ	11	Unmodified	_GVGKAGVSPKQ_					0	0	0			REV__ENST00000257552.6_1_12:120779899-120780196:-|nuORF	REV__ENST00000257552.6_1_12:120779899-120780196:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.2980346679688	2	514.298373	1026.58219	2.4088	0.0012388	-3.0087	-0.0015473	-0.59985	-0.0003085	514.2969979769872	96.495	1.923	96.438	95.348	97.271	-0.056389					101	44	3	0	0	0	0.72739	1	10334	10334		27.047	2.8446	1	635860	+		13411	24342	9212	9221	15444	15444					0.06996547708831713
GVGLGGWLP	9	Unmodified	_GVGLGGWLP_					0	0	0		ENST00000423620.6_1_8:95653352-95653454:+|nuORF	ENST00000423620.6_1_8:95653352-95653454:+|nuORF	ENST00000423620.6_1_8:95653352-95653454:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.26141357421875	2	428.239796	854.465038	1.2325	0.00052779	2.3076	0.00098821	3.5401	0.001516	428.2406037440331	90.552	0.3196	91.003	90.782	91.101	0.45058					9	7	2	0	0	0	0.20789	1	10733	10733		21.702	8.7432	1	213900			13412	11500	9213	9222	15445	15445					0.03198434559908492
GVGLGLGRR	9	Unmodified	_GVGLGLGRR_					0	0	0			REV__ENST00000263674.3_1_11:73019352-73019610:+|nuORF	REV__ENST00000263674.3_1_11:73019352-73019610:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.775146484375	2	442.774868	883.535184	0.29797	0.00013193	0.23129	0.00010241	0.52925	0.00023434	442.7748356290564	21.164	0.4752	20.705	20.424	20.9	-0.4591					18	10	2	0	0	0	0.67235	1	754	754		42.474	10.52	1	133710	+		13413	24454	9214	9223	15446	15446					0.08875732948365567
GVGPKGPPL	9	Unmodified	_GVGPKGPPL_					0	0	0			REV__ENST00000480548.5_1_1:67137634-67156055:+|nuORF	REV__ENST00000480548.5_1_1:67137634-67156055:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.1756591796875	2	411.247621	820.480688	-1.8022	-0.00074113	-3.9892	-0.0016406	-5.7914	-0.0023817	411.24591374232125	94.527	0.74405	94.758	94.404	95.148	0.23103					26	17	2	0	0	0	0.20789	1	9695	9695		12.207	0	1	123500	+		13414	18313	9215	9224	15447	15447					0.06326721076936792
GVGQLVKKLS	10	Unmodified	_GVGQLVKKLS_					0	0	0			REV__ENST00000477533.5_1_1:155023817-155026448:+|nuORF	REV__ENST00000477533.5_1_1:155023817-155026448:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7821044921875	2	514.826766	1027.63898	0.78673	0.00040503	-4.1078	-0.0021148	-3.321	-0.0017098	515.3251217408042	16.007	0.18199	15.52	15.389	15.571	-0.48719					5	3	2	0	0	0	0.37624	1	63	63		24.519	20.835	1	14287	+		13415	26819	9216	9225	15448	15448					0.12626595265373908
GVHGGLINK	9	Unmodified	_GVHGGLINK_					0	0	0		ENSG00000108518|ENST00000225655|PFN1	ENSG00000108518|ENST00000225655|PFN1	ENSG00000108518|ENST00000225655|PFN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7615966796875	2	447.761426	893.5083	-0.088431	-3.9596E-05	-1.2083	-0.00054104	-1.2968	-0.00058064	447.7610086963675	23.767	2.5137	23.385	22.449	24.963	-0.38178					185	57	6	0	0	0	0.021904	15	1127	1010;1044;1055;1067;1078;1090;1102;1114;1127;1139;1152;1163;1176;1187;1210		123.99	0	1	39013000			13416	2413	9217	9226	15449;15450;15451;15452;15453;15454;15455;15456;15457;15458;15459;15460;15461;15462;15463	15457					0.057286243371777346
GVHGGLINK	9	Unmodified	_GVHGGLINK_					0	0	0		ENSG00000108518|ENST00000225655|PFN1	ENSG00000108518|ENST00000225655|PFN1	ENSG00000108518|ENST00000225655|PFN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.76141357421875	2	447.761426	893.5083	1.3347	0.00059763	-2.5954	-0.0011621	-1.2607	-0.00056451	447.76038296550075	23.705	4.4673	23.13	22.409	26.877	-0.57415					218	103	6	0	0	0	0.021904	13	1064	1052;1064;1076;1088;1100;1112;1125;1136;1148;1160;1173;1185;1197		123.99	0	1	38285000			13417	2413	9217	9226	15464;15465;15466;15467;15468;15469;15470;15471;15472;15473;15474;15475;15476	15465					0.057286243371777346
GVIDVITKTW	10	Unmodified	_GVIDVITKTW_					0	0	0		ENSG00000164933|ENST00000297578|SLC25A32;ENST00000523701.1_1_8:104413742-104414267:-|nuORF	ENSG00000164933|ENST00000297578|SLC25A32	ENSG00000164933|ENST00000297578|SLC25A32	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	566.323974609375	2	566.324057	1130.63356	-0.69694	-0.00039469	0.76297	0.00043209	0.066034	3.7396E-05	566.3243645593142	80.591	1.078	80.591	80.261	81.339	0					103	37	4	0	0	0	4.4586E-33	4	7448	7429;7440;7448;7457		190.62	97.479	1	1580900			13418	6025	9218	9227	15477;15478;15479;15480	15479					0.07346871682898382
GVIEKLLTSY	10	Unmodified	_GVIEKLLTSY_					0	0	0		nc|ENSG00000009307|O75534-2|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.8237915039062	2	561.823889	1121.63323	-0.74796	-0.00042022	0.79011	0.0004439	0.042145	2.3678E-05	561.8241958260093	78.743	0.73596	78.743	78.454	79.19	0					53	22	3	0	0	0	0.046234	6	7214	7188;7197;7205;7214;7222;7236		109.44	37.561	1	379110			13419	752	9219	9228	15481;15482;15483;15484;15485;15486	15484					0.07727451963069143
GVIKLKKP	8	Unmodified	_GVIKLKKP_					0	0	0		nc|ENSG00000140937|P55287-2|CDH11;ENSG00000140937|ENST00000268603|CDH11;chr5:21802420-21816945|26|13.58|0.65|4.39|-|0|CDH12,CDH12|1;ENST00000521384.5_1_5:21751848-21889748:-|nuORF;nc|ENSG00000154162|P55289-2|CDH12;ENSG00000154162|ENST00000382254|CDH12	nc|ENSG00000140937|P55287-2|CDH11;nc|ENSG00000154162|P55289-2|CDH12	nc|ENSG00000154162|P55289-2|CDH12	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.80902099609375	2	441.810388	881.606223	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.706	1	20.247	19.747	20.747	-0.4591								0	0	0	0.30125	1	681	681		20.482	3.7769	1				13420	4465;5257	9220	9229	15487	15487					0.16068432933172971
GVIKLKKP	8	Unmodified	_GVIKLKKP_					0	0	0		nc|ENSG00000140937|P55287-2|CDH11;ENSG00000140937|ENST00000268603|CDH11;chr5:21802420-21816945|26|13.58|0.65|4.39|-|0|CDH12,CDH12|1;ENST00000521384.5_1_5:21751848-21889748:-|nuORF;nc|ENSG00000154162|P55289-2|CDH12;ENSG00000154162|ENST00000382254|CDH12	nc|ENSG00000140937|P55287-2|CDH11;nc|ENSG00000154162|P55289-2|CDH12	nc|ENSG00000154162|P55289-2|CDH12	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.8082275390625	2	441.810388	881.606223	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.898	1	20.27	19.77	20.77	-0.62835								0	0	0	0.29353	1	712	712		28.254	1.4582	1				13421	4465;5257	9220	9229	15488	15488					0.16068432933172971
GVILLAKR	8	Unmodified	_GVILLAKR_					0	0	0			REV__ENSG00000198883|ENST00000535214|PNMA5	REV__ENSG00000198883|ENST00000535214|PNMA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3001708984375	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.85277	1	7255	7255		25.45	0	1	881780	+		13422	23403	9221	9230	15489	15489					0.14627262273359065
GVILLAKR	8	Unmodified	_GVILLAKR_					0	0	0			REV__ENSG00000198883|ENST00000535214|PNMA5	REV__ENSG00000198883|ENST00000535214|PNMA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30035400390625	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.89457	1	7157	7157		37.028	1.8278	1	1921500	+		13423	23403	9221	9230	15490	15490					0.14627262273359065
GVISIPLYIPH	11	Unmodified	_GVISIPLYIPH_					0	0	0		ENSG00000134489|ENST00000256906|HRH4	ENSG00000134489|ENST00000256906|HRH4	ENSG00000134489|ENST00000256906|HRH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.5751647949219	3	403.572775	1207.69649	0.62042	0.00025038	4.4482	0.0017952	5.0687	0.0020456	403.5745077021451	83.731	2.4581	83.662	83.085	85.543	-0.069313					131	56	3	0	0	0	0.69931	1	8486	8486		31.634	6.5083	1	315140			13424	3937	9222	9231	15491	15491					0.10095437470931756
GVISIPLYIPH	11	Unmodified	_GVISIPLYIPH_					0	0	0		ENSG00000134489|ENST00000256906|HRH4	ENSG00000134489|ENST00000256906|HRH4	ENSG00000134489|ENST00000256906|HRH4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5746154785156	3	403.572775	1207.69649	0.57405	0.00023167	4.2788	0.0017268	4.8529	0.0019585	403.57443061209773	82.843	3.1803	82.99	82.289	85.469	0.14694					168	73	3	0	0	0	0.69931	1	7938	7938		31.634	2.0835	1	1495300			13425	3937	9222	9231	15492	15492					0.10095437470931756
GVITSAKK	8	Unmodified	_GVITSAKK_					0	0	0		nc|ENSG00000101104|Q4VXU2-2|PABPC1L	nc|ENSG00000101104|Q4VXU2-2|PABPC1L	nc|ENSG00000101104|Q4VXU2-2|PABPC1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.252685546875	2	402.252903	802.491253	0.45654	0.00018364	-1.5775	-0.00063455	-1.1209	-0.0004509	402.25224579031755	20.284	0.3759	20.263	20.105	20.48	-0.020922					36	18	3	0	0	0	0.82419	1	478	478		13.775	1.5685	1	136790			13426	14820	9223	9232	15493	15493					0.0821070373136763
GVITSAKK	8	Unmodified	_GVITSAKK_					0	0	0		nc|ENSG00000101104|Q4VXU2-2|PABPC1L	nc|ENSG00000101104|Q4VXU2-2|PABPC1L	nc|ENSG00000101104|Q4VXU2-2|PABPC1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.25244140625	2	402.252903	802.491253	2.0255	0.00081478	-2.7001	-0.0010861	-0.67453	-0.00027133	402.2516718442352	21.748	0.98491	21.304	20.961	21.946	-0.44324					46	22	3	0	0	0	0.83058	1	829	829		12.959	0.75233	1	622200			13427	14820	9223	9232	15494	15494					0.0821070373136763
GVKAEIPL	8	Unmodified	_GVKAEIPL_					0	0	0		ENST00000427196.1_1_6:33218457-33219452:+|nuORF	ENST00000427196.1_1_6:33218457-33219452:+|nuORF	ENST00000427196.1_1_6:33218457-33219452:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.19573974609375	2	413.755278	825.496004	-1.8183	-0.00075234	-0.89907	-0.00037199	-2.7174	-0.0011243	413.75489474604876	85.15	0.73171	85.334	85.143	85.875	0.18428					24	16	2	0	0	0	0.4196	1	8344	8344		30.504	3.7075	1	104550			13428	11568	9224	9233	15495	15495					0.07627587874128494
GVKDTRRV	8	Unmodified	_GVKDTRRV_					0	0	0			REV__nc|ENSG00000033170|Q9BYC5-3|FUT8	REV__nc|ENSG00000033170|Q9BYC5-3|FUT8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7775573730469	2	465.777608	929.540663	0.5788	0.00026959	-0.59714	-0.00027814	-0.018347	-8.5455E-06	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.87922	2	7584	7584;7601		33.516	5.2613	1	344270	+		13429	16281	9225	9234	15496;15497	15496					0.07307411740180214
GVKGLIII	8	Unmodified	_GVKGLIII_					0	0	0		nc|ENSG00000184381|O60733-2|PLA2G6;ENSG00000184381|ENST00000332509|PLA2G6	nc|ENSG00000184381|O60733-2|PLA2G6	nc|ENSG00000184381|O60733-2|PLA2G6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852478027344	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.85787	1	1680	1680		9.4706	0.64823	1	1606100			13430	7606	9226	9235	15498	15498					0.13981055150509292
GVKGLIII	8	Unmodified	_GVKGLIII_					0	0	0		nc|ENSG00000184381|O60733-2|PLA2G6;ENSG00000184381|ENST00000332509|PLA2G6	nc|ENSG00000184381|O60733-2|PLA2G6	nc|ENSG00000184381|O60733-2|PLA2G6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852783203125	2	406.783839	811.553125	2.7329	0.0011117	1.0571	0.00043001	3.79	0.0015417	406.7841375125675	29.651	1.9122	29.636	28.895	30.807	-0.015167					147	57	4	0	0	0	0.80963	1	1480	1480		15.636	0.97212	1	914260			13431	7606	9226	9235	15499	15499					0.13981055150509292
GVKGLIII	8	Unmodified	_GVKGLIII_					0	0	0		nc|ENSG00000184381|O60733-2|PLA2G6;ENSG00000184381|ENST00000332509|PLA2G6	nc|ENSG00000184381|O60733-2|PLA2G6	nc|ENSG00000184381|O60733-2|PLA2G6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78521728515625	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.81724	1	1271	1271		14.664	0.88877	1	1410200			13432	7606	9226	9235	15500	15500					0.13981055150509292
GVKGLIII	8	Unmodified	_GVKGLIII_					0	0	0		nc|ENSG00000184381|O60733-2|PLA2G6;ENSG00000184381|ENST00000332509|PLA2G6	nc|ENSG00000184381|O60733-2|PLA2G6	nc|ENSG00000184381|O60733-2|PLA2G6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7851867675781	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.82464	1	1271	1271		21.702	7.0382	1	1286900			13433	7606	9226	9235	15501	15501					0.13981055150509292
GVKGLIII	8	Unmodified	_GVKGLIII_					0	0	0		nc|ENSG00000184381|O60733-2|PLA2G6;ENSG00000184381|ENST00000332509|PLA2G6	nc|ENSG00000184381|O60733-2|PLA2G6	nc|ENSG00000184381|O60733-2|PLA2G6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7848815917969	2	406.783839	811.553125	1.1655	0.00047412	2.3762	0.00096659	3.5417	0.0014407	406.7846691604622	32.902	0.76672	33.072	32.59	33.356	0.16971					56	17	4	0	0	0	0.83466	1	2282	2282		23.037	1.3344	1	1453200			13434	7606	9226	9235	15502	15502					0.13981055150509292
GVKIIQWLLGL	11	Unmodified	_GVKIIQWLLGL_					0	0	0			REV__ENSG00000120756|ENST00000457734|PLS1	REV__ENSG00000120756|ENST00000457734|PLS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.93243408203125	3	413.932303	1238.77508	0.12638	5.2312E-05	0.8226	0.0003405	0.94898	0.00039281	413.93257989675	45.178	2.8999	45.16	43.533	46.433	-0.018585					218	68	4	0	0	0	0.73621	1	3352	3352		25.126	1.7481	1	518900	+		13435	18429	9227	9236	15503	15503					0.16524289776043588
GVKIRPTLIGR	11	Unmodified	_GVKIRPTLIGR_					0	0	0			REV__ENSG00000100345|ENST00000216181|MYH9	REV__ENSG00000100345|ENST00000216181|MYH9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.92950439453125	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.78607	1	3888	3888		14.243	0.73531	1	2612300	+		13436	17175	9228	9237	15504	15504					0.17569039722025082
GVKLSATK	8	Unmodified	_GVKLSATK_					0	0	0			REV__chr4:161917254-161920404|18|21.33|0.03|9.5|-|0|TE_info:AluSg7,AluSg7_dup2205,Alu,SINE,acceptor,-,161916948,161917254|None,FSTL5|1	REV__chr4:161917254-161920404|18|21.33|0.03|9.5|-|0|TE_info:AluSg7,AluSg7_dup2205,Alu,SINE,acceptor,-,161916948,161917254|None,FSTL5|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.251953125	2	402.252903	802.491253	-1.9385	-0.00077976	1.1499	0.00046257	-0.78852	-0.00031719	402.25323570415725	20.33	0.48855	20.374	20.211	20.699	0.043747					36	23	2	0	0	0	0.7961	1	486	486		17.365	5.1581	1	238530	+		13437	15823	9229	9238	15505	15505					0.0821070373136763
GVKPGRPV	8	Unmodified	_GVKPGRPV_					0	0	0			REV__nc|ENSG00000090615|Q08378-4|GOLGA3	REV__nc|ENSG00000090615|Q08378-4|GOLGA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.9241943359375	2	405.253237	808.491922	-0.80627	-0.00032674	1.7977	0.00072851	0.99139	0.00040176	405.2542808911084	38.546	0.12641	39.068	38.994	39.121	0.52236					4	2	2	0	0	0	0.4196	1	3190	3190		26.796	8.4717	1	27840	+		13438	16993	9230	9239	15506	15506					0.08001543171076264
GVKRPQLRNLI	11	Unmodified	_GVKRPQLRNLI_					0	0	0			REV__ENSG00000176922|ENST00000322101|OR51S1	REV__ENSG00000176922|ENST00000322101|OR51S1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	431.9409484863281	3	431.941973	1292.80409	-1.7321	-0.00074817	-0.39948	-0.00017255	-2.1316	-0.00092072	431.94179843384273	16.54	0.50933	16.588	16.419	16.929	0.047802					59	22	4	0	0	0	0.74405	1	164	164		23.378	4.1152	1	969490	+		13439	22158	9231	9240	15507	15507					0.1693982712504294
GVKRPQLRNLI	11	Unmodified	_GVKRPQLRNLI_					0	0	0			REV__ENSG00000176922|ENST00000322101|OR51S1	REV__ENSG00000176922|ENST00000322101|OR51S1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	431.941973	1292.80409	-2.1642	-0.00093483	0.012287	5.3074E-06	-2.152	-0.00092952	431.94201309535816	16.622	0.34875	16.622	16.513	16.861	0	0.032379	0.002251	NaN	23.378	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128090	+		13440	22158	9231	9240							0.1693982712504294
GVKRPQLRNLI	11	Unmodified	_GVKRPQLRNLI_					0	0	0			REV__ENSG00000176922|ENST00000322101|OR51S1	REV__ENSG00000176922|ENST00000322101|OR51S1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	431.941973	1292.80409	0.92634	0.00040013	-2.5122	-0.0010851	-1.5859	-0.00068501	431.9410656894779	16.527	0.16818	16.604	16.475	16.643	0.077148	0.014137	-0.0010203	NaN	23.378	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20029	+		13441	22158	9231	9240							0.1693982712504294
GVKRPQLRNLI	11	Unmodified	_GVKRPQLRNLI_					0	0	0			REV__ENSG00000176922|ENST00000322101|OR51S1	REV__ENSG00000176922|ENST00000322101|OR51S1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	431.941973	1292.80409	-1.7321	-0.00074817	-0.39948	-0.00017255	-2.1316	-0.00092072	431.94179843384273	16.54	0.50933	16.588	16.419	16.929	0.047802	-0.0022651	0.0017174	NaN	23.378	59	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	969490	+		13442	22158	9231	9240							0.1693982712504294
GVKRPQLRNLI	11	Unmodified	_GVKRPQLRNLI_					0	0	0			REV__ENSG00000176922|ENST00000322101|OR51S1	REV__ENSG00000176922|ENST00000322101|OR51S1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	431.941973	1292.80409	0.55064	0.00023785	-2.6291	-0.0011356	-2.0784	-0.00089776	431.940835038813	16.615	0.67008	16.59	16.376	17.046	-0.024035	0.00055181	-0.0011717	NaN	23.378	60	28	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1017400	+		13443	22158	9231	9240							0.1693982712504294
GVKRPQLRNLI	11	Unmodified	_GVKRPQLRNLI_					0	0	0			REV__ENSG00000176922|ENST00000322101|OR51S1	REV__ENSG00000176922|ENST00000322101|OR51S1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	431.941973	1292.80409	0.49234	0.00021266	-2.5243	-0.0010903	-2.0319	-0.00087767	431.94080774412055	17.112	0.53446	16.63	16.457	16.991	-0.48256	0.039731	-0.0010359	NaN	23.378	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142150	+		13444	22158	9231	9240							0.1693982712504294
GVKRPQLRNLI	11	Unmodified	_GVKRPQLRNLI_					0	0	0			REV__ENSG00000176922|ENST00000322101|OR51S1	REV__ENSG00000176922|ENST00000322101|OR51S1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	431.941973	1292.80409	0.56838	0.00024551	-2.5866	-0.0011173	-2.0182	-0.00087176	431.9407414070693	17.154	0.53843	16.543	16.348	16.886	-0.6107	-0.046942	-0.0011167	NaN	23.378	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176900	+		13445	22158	9231	9240							0.1693982712504294
GVKRPSSVK	9	Unmodified	_GVKRPSSVK_					0	0	0		ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781237-34781759:-|nuORF;ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000595164.5_1_19:39327364-39331218:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;nc|ENSG00000104824|P14866-2|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2950134277344	2	479.295633	956.576714	-0.50734	-0.00024316	0.34572	0.0001657	-0.16162	-7.7463E-05	479.2956593475875	17.406	0.40918	16.795	16.52	16.929	-0.6107					18	8	3	0	0	0	0.36889	1	264	264		59.931	3.2097	1	98503			13446	2151	9232	9241	15508	15508					0.09668868917037798
GVKRPSSVK	9	Unmodified	_GVKRPSSVK_					0	0	0		ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781237-34781759:-|nuORF;ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000595164.5_1_19:39327364-39331218:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;nc|ENSG00000104824|P14866-2|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	479.295633	956.576714	1.1553	0.00055372	-1.8432	-0.00088345	-0.68796	-0.00032974	479.294538269937	17.352	0.36615	16.87	16.625	16.991	-0.48256	0.037447	-0.0016087	NaN	59.931	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112570			13447	2151	9232	9241							0.09668868917037798
GVKRQRLLPN	10	Unmodified	_GVKRQRLLPN_					0	0	0			REV__ENSG00000133401|ENST00000438447|PDZD2	REV__ENSG00000133401|ENST00000438447|PDZD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.866943359375	2	590.867289	1179.72002	-0.76513	-0.00045209	-0.7988	-0.00047199	-1.5639	-0.00092408	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.85934	1	11408	11408		35.618	0	1	54208000	+		13448	19076	9233	9242	15509	15509					0.13735296028130506
GVKRVQTLS	9	Unmodified	_GVKRVQTLS_					0	0	0			REV__ENST00000496740.6_1_7:2801875-2802795:-|nuORF	REV__ENST00000496740.6_1_7:2801875-2802795:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.3009948730469	2	494.300916	986.587279	-0.82421	-0.00040741	0.56645	0.00028	-0.25775	-0.00012741	494.3011394049625	97.613	4.008	97.613	96.986	100.99	0					359	95	6	0	0	0	0.71772	4	9969	9742;9945;9969;10057		39.253	11.371	1	29815000	+		13449	27756	9234	9243	15510;15511;15512;15513	15512					0.09344851571484014
GVKRVQTLS	9	Unmodified	_GVKRVQTLS_					0	0	0			REV__ENST00000496740.6_1_7:2801875-2802795:-|nuORF	REV__ENST00000496740.6_1_7:2801875-2802795:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3009033203125	2	494.300916	986.587279	2.3073	0.0011405	-2.72	-0.0013445	-0.41277	-0.00020403	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.67345	2	10432	10432;10630		42.396	7.298	1	53958000	+		13450	27756	9234	9243	15514;15515	15514					0.09344851571484014
GVKRVQTLS	9	Unmodified	_GVKRVQTLS_					0	0	0			REV__ENST00000496740.6_1_7:2801875-2802795:-|nuORF	REV__ENST00000496740.6_1_7:2801875-2802795:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3012390136719	2	494.300916	986.587279	-0.58165	-0.00028751	0.50872	0.00025146	-0.072933	-3.6051E-05	494.30110008283356	100.79	1.5343	100.99	100.36	101.9	0.2058					82	36	3	0	0	0	0.77696	1	10528	10528		31.53	3.6476	1	820880	+		13451	27756	9234	9243	15516	15516					0.09344851571484014
GVKRVQTLS	9	Unmodified	_GVKRVQTLS_					0	0	0			REV__ENST00000496740.6_1_7:2801875-2802795:-|nuORF	REV__ENST00000496740.6_1_7:2801875-2802795:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.30096435546875	2	494.300916	986.587279	-1.6335	-0.00080746	1.1761	0.00058136	-0.4574	-0.0002261	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.6204	1	10287	10287		45.972	1.5951	1	46933000	+		13452	27756	9234	9243	15517	15517					0.09344851571484014
GVKSAVKGLGP	11	Unmodified	_GVKSAVKGLGP_					0	0	0			REV__ENST00000522192.5_1_5:158126121-158523561:-|nuORF	REV__ENST00000522192.5_1_5:158126121-158523561:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8111877441406	2	506.811116	1011.60768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.686	1	54.66	54.16	55.16	-0.025955								0	0	0	0.56276	1	4944	4944		28.081	0.19925	1		+		13453	28129	9235	9244	15518	15518					0.1023402223128187
GVKSLSKEEL	10	Unmodified	_GVKSLSKEEL_					0	0	0		ENSG00000116668|ENST00000367500|SWT1	ENSG00000116668|ENST00000367500|SWT1	ENSG00000116668|ENST00000367500|SWT1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3099365234375	2	545.311146	1088.60774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.178	1	15.691	15.191	16.191	-0.48718								0	0	0	0.45132	1	97	97		47.96	3.5823	1				13454	2930	9236	9245	15519	15519					0.06697977440603609
GVKVLLAI	8	Unmodified	_GVKVLLAI_					0	0	0			REV__ENSG00000164168|ENST00000296582|TMEM184C	REV__ENSG00000164168|ENST00000296582|TMEM184C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7850036621094	2	406.783839	811.553125	-0.45573	-0.00018539	4.0823	0.0016606	3.6266	0.0014752	406.7853476026277	33.431	0.94502	33.374	32.967	33.912	-0.056385					79	22	4	0	0	0	0.82464	1	2018	2018		21.702	1.2205	1	606440	+		13455	21043	9237	9246	15520	15520					0.13981055150509292
GVKVLLAI	8	Unmodified	_GVKVLLAI_					0	0	0			REV__ENSG00000164168|ENST00000296582|TMEM184C	REV__ENSG00000164168|ENST00000296582|TMEM184C	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2574768066406	2	406.783839	811.553125	0.94354	0.00038382	2.0348	0.00082774	2.9784	0.0012116	406.78457573075855	39.512	1.015	39.521	39.182	40.197	0.0092812					36	23	2	0	0	0	0.4196	1	2820	2820		19.36	4.6959	1	31809	+		13456	21043	9237	9246	15521	15521					0.13981055150509292
GVKVLLAI	8	Unmodified	_GVKVLLAI_					0	0	0			REV__ENSG00000164168|ENST00000296582|TMEM184C	REV__ENSG00000164168|ENST00000296582|TMEM184C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852783203125	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.82464	1	1688	1688		21.702	0	1	1756100	+		13457	21043	9237	9246	15522	15522					0.13981055150509292
GVKVLLAI	8	Unmodified	_GVKVLLAI_					0	0	0			REV__ENSG00000164168|ENST00000296582|TMEM184C	REV__ENSG00000164168|ENST00000296582|TMEM184C	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	406.783839	811.553125	-1.2095	-0.00049201	4.9189	0.0020009	3.7094	0.0015089	406.78576384988537	38.931	0.77121	39.486	39.194	39.966	0.55449	0.025699	0.0013407	NaN	19.36	33	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47221	+		13458	21043	9237	9246							0.13981055150509292
GVKVSVVE	8	Unmodified	_GVKVSVVE_					0	0	0		ENSG00000161267|ENST00000392379|BDH1	ENSG00000161267|ENST00000392379|BDH1	ENSG00000161267|ENST00000392379|BDH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.29248046875	2	408.744911	815.475269	0.3301	0.00013493	0.30534	0.00012481	0.63544	0.00025973	408.7448599811594	22.652	0.95882	22.041	21.71	22.669	-0.6107					35	23	2	0	0	0	0.4196	1	1008	1008		10.866	0	1	104690			13459	5630	9238	9247	15523	15523					0.06014997494480667
GVLAPGPLP	9	Unmodified	_GVLAPGPLP_					0	0	0			REV__nc|ENSG00000113108|O95704-6|APBB3	REV__nc|ENSG00000113108|O95704-6|APBB3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	410.7484436035156	2	410.749996	819.485439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.624	1	25.674	25.174	26.174	0.050451								0	0	0	0.2792	1	1029	1029		39.021	9.18	1		+		13460	29786	9239	9248	15524	15524					0.0684760521970702
GVLESPCP	8	Unmodified	_GVLESPCP_					0	0	0		ENST00000335312.7_1_19:3631207-3631609:-|nuORF	ENST00000335312.7_1_19:3631207-3631609:-|nuORF	ENST00000335312.7_1_19:3631207-3631609:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.1962585449219	2	401.194196	800.37384	-1.7271	-0.00069291	-1.0481	-0.0004205	-2.7752	-0.0011134	401.19360802002416	82.242	0.77246	82.368	81.975	82.747	0.12601					25	17	2	0	0	0	0.4196	1	7901	7901		29.842	21.61	1	129770			13461	10155	9240	9249	15525	15525					-0.03433197199740334
GVLFLLKVG	9	Unmodified	_GVLFLLKVG_					0	0	0			REV__ENSG00000132622|ENST00000254963|HSPA12B	REV__ENSG00000132622|ENST00000254963|HSPA12B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.8086242675781	2	473.310221	944.605889	-0.31808	-0.00015055	-4.0771	-0.0019297	-4.3952	-0.0020803	473.3084977250341	16.71	0.13116	16.631	16.595	16.726	-0.079056					7	4	2	0	0	0	0.7932	1	150	150		18.324	4.5491	1	23603	+		13462	19016	9241	9250	15526	15526					0.1313701321332701
GVLFLLKVG	9	Unmodified	_GVLFLLKVG_					0	0	0			REV__ENSG00000132622|ENST00000254963|HSPA12B	REV__ENSG00000132622|ENST00000254963|HSPA12B	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	473.310221	944.605889	-0.31808	-0.00015055	-4.0771	-0.0019297	-4.3952	-0.0020803	473.3084977250341	16.71	0.13116	16.631	16.595	16.726	-0.079056	0	0	NaN	18.324	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23603	+		13463	19016	9241	9250							0.1313701321332701
GVLFPHNSA	9	Unmodified	_GVLFPHNSA_					0	0	0			REV__ENSG00000163558|ENST00000295797|PRKCI	REV__ENSG00000163558|ENST00000295797|PRKCI	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	471.2430114746094	2	471.245609	940.476666	-1.1193	-0.00052749	-2.6346	-0.0012416	-3.754	-0.001769	471.2441988506581	85.918	3.203	85.918	84.395	87.598	0					120	73	3	0	0	0	0.76764	1	8189	8189		34.173	0.67956	1	202290	+		13464	20934	9242	9251	15527	15527					0.0040463158322836534
GVLGKLLL	8	Unmodified	_GVLGKLLL_					0	0	0			REV__ENST00000339570.9_1_12:125262795-125262981:-|nuORF	REV__ENST00000339570.9_1_12:125262795-125262981:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7845153808594	2	406.783839	811.553125	0.022938	9.3307E-06	3.6731	0.0014942	3.696	0.0015035	406.7851827724374	33.215	0.93484	33.182	32.78	33.715	-0.032677					97	42	3	0	0	0	0.81548	1	1645	1645		20.482	0	1	368720	+		13465	25236	9243	9252	15528	15528					0.13981055150509292
GVLGLQPK	8	Unmodified	_GVLGLQPK_					0	0	0		ENST00000426595.1_1_7:55973978-55979358:+|nuORF	ENST00000426595.1_1_7:55973978-55979358:+|nuORF	ENST00000426595.1_1_7:55973978-55979358:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7848815917969	2	406.255446	810.496338	-0.0083361	-3.3866E-06	3.1423	0.0012766	3.134	0.0012732	406.25641654414596	34.047	0.1283	34.001	33.94	34.069	-0.045815					7	5	2	0	0	0	0.4196	1	1690	1690		3.9852	0	1	28540			13466	11558	9244	9253	15529	15529					0.08351007593989834
GVLGTTKK	8	Unmodified	_GVLGTTKK_					0	0	0			REV__ENST00000467117.5_1_7:123191621-123197849:-|nuORF	REV__ENST00000467117.5_1_7:123191621-123197849:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2522888183594	2	402.252903	802.491253	2.0255	0.00081478	-2.7001	-0.0010861	-0.67453	-0.00027133	402.2516718442352	21.748	0.98491	21.304	20.961	21.946	-0.44324					46	22	3	0	0	0	0.7961	1	805	805		17.365	1.7232	1	622200	+		13467	18785	9245	9254	15530	15530					0.08210703731378999
GVLKLAIR	8	Unmodified	_GVLKLAIR_					0	0	0			REV__ENSG00000100714|ENST00000652337|MTHFD1	REV__ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2998046875	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.86288	2	7084	7084;7132		31.955	5.0938	1	1680500	+		13468	17215	9246	9255	15531;15532	15531					0.14627262273347696
GVLKLAIR	8	Unmodified	_GVLKLAIR_					0	0	0			REV__ENSG00000100714|ENST00000652337|MTHFD1	REV__ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3001708984375	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.91005	1	7287	7287		42.474	7.2737	1	881780	+		13469	17215	9246	9255	15533	15533					0.14627262273347696
GVLKLAIR	8	Unmodified	_GVLKLAIR_					0	0	0			REV__ENSG00000100714|ENST00000652337|MTHFD1	REV__ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2999572753906	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.90465	1	6840	6840		40.573	3.5441	1	2081500	+		13470	17215	9246	9255	15534	15534					0.14627262273347696
GVLKLAIR	8	Unmodified	_GVLKLAIR_					0	0	0			REV__ENSG00000100714|ENST00000652337|MTHFD1	REV__ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2998352050781	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.884	3	8209	8209;8232;8254		50.025	12.996	1	5485100	+		13471	17215	9246	9255	15535;15536;15537	15535					0.14627262273347696
GVLKLAIR	8	Unmodified	_GVLKLAIR_					0	0	0			REV__ENSG00000100714|ENST00000652337|MTHFD1	REV__ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2994079589844	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.91005	1	8268	8268		42.474	5.446	1	6323600	+		13472	17215	9246	9255	15538	15538					0.14627262273347696
GVLKLLEP	8	Unmodified	_GVLKLLEP_					0	0	0		nc|ENSG00000136877|Q05932-3|FPGS;nc|ENSG00000136877|Q05932-2|FPGS;nc|ENSG00000136877|Q05932-4|FPGS;ENSG00000136877|ENST00000373247|FPGS	nc|ENSG00000136877|Q05932-3|FPGS	nc|ENSG00000136877|Q05932-3|FPGS	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.2925720214844	2	434.778754	867.542954	0.49769	0.00021639	2.1244	0.00092362	2.622	0.00114	434.77983522518446	73.944	1.4017	74.075	73.741	75.143	0.13127					67	50	2	0	0	0	0.4196	1	6828	6828		40.573	22.248	1	97597			13473	4150	9247	9256	15539	15539					0.10388447425282266
GVLLFPTK	8	Unmodified	_GVLLFPTK_					0	0	0			REV__nc|ENSG00000289694|P60953-1|CDC42	REV__nc|ENSG00000289694|P60953-1|CDC42	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2740783691406	2	437.773471	873.53239	0.2474	0.00010831	-2.0676	-0.00090513	-1.8202	-0.00079682	437.7710405580141	46.352	0.17301	46.39	46.232	46.405	0.038181					5	4	2	0	0	0	0.4196	1	3390	3390		18.324	0	1	30927	+		13474	16616	9248	9257	15540	15540					0.09056464770833372
GVLLRKAL	8	Unmodified	_GVLLRKAL_					0	0	0			REV__nc|ENSG00000139842|Q13619-2|CUL4A;REV__nc|ENSG00000158290|Q13620-3|CUL4B	REV__nc|ENSG00000139842|Q13619-2|CUL4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3000793457031	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.80706	1	7188	7188		19.36	0	1	1921500	+		13475	19575;20599	9249	9258	15541	15541					0.14627262273359065
GVLLSFSL	8	Unmodified	_GVLLSFSL_					0	0	0			REV__nc|ENSG00000099866|Q13477-4|MADCAM1	REV__nc|ENSG00000099866|Q13477-4|MADCAM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.18389892578125	2	418.249829	834.485105	-1.8817	-0.00078703	-3.0027	-0.0012559	-4.8844	-0.0020429	418.24828914852867	87.697	0.77654	87.867	87.307	88.083	0.16922					27	17	2	0	0	0	0.4196	1	8580	8580		20.482	12.792	1	99414	+		13476	17112	9250	9259	15542	15542					0.06124185499857049
GVLLVDTIT	9	Unmodified	_GVLLVDTIT_					0	0	0			REV__ENSG00000164171|ENST00000296585|ITGA2	REV__ENSG00000164171|ENST00000296585|ITGA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774963378906	2	465.778951	929.543348	-0.25577	-0.00011913	-2.7145	-0.0012643	-2.9702	-0.0013835	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.77546	1	7934	7934		31.955	6.5047	1	451640	+		13477	21045	9251	9260	15543	15543					0.07575822354453976
GVLNENGP	8	Unmodified	_GVLNENGP_					0	0	0		ENSG00000086696|ENST00000199936|HSD17B2	ENSG00000086696|ENST00000199936|HSD17B2	ENSG00000086696|ENST00000199936|HSD17B2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1993103027344	2	400.200867	798.387182	1.235	0.00049424	-3.6984	-0.0014801	-2.4635	-0.00098588	400.2007500976596	65.261	1.216	65.647	64.776	65.992	0.38615					58	31	3	0	0	0	0.87064	1	6993	6993		29.15	0	1	302440			13478	1559	9252	9261	15544	15544					-0.02007623096142197
GVLPCKLKH	9	Unmodified	_GVLPCKLKH_					0	0	0		nc|ENSG00000115290|Q14449-2|GRB14;ENSG00000115290|ENST00000263915|GRB14;nc|ENSG00000106070|Q13322-3|GRB10;nc|ENSG00000106070|Q13322-2|GRB10;nc|ENSG00000106070|Q13322-4|GRB10;ENSG00000106070|ENST00000401949|GRB10	nc|ENSG00000115290|Q14449-2|GRB14	nc|ENSG00000115290|Q14449-2|GRB14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.7954406738281	2	497.796955	993.579357	-1.5169	-0.00075511	-0.74462	-0.00037067	-2.2615	-0.0011258	497.7963799927103	49.017	1.345	49.017	48.626	49.971	0					75	31	3	0	0	0	0.7932	1	3806	3806		24.203	1.1603	1	491380			13479	2831	9253	9262	15545	15545					0.08231001050342002
GVLPRWVPK	9	Unmodified	_GVLPRWVPK_					0	0	0		ENSG00000164363|ENST00000324642|SLC6A18	ENSG00000164363|ENST00000324642|SLC6A18	ENSG00000164363|ENST00000324642|SLC6A18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3250122070312	2	526.324194	1050.63383	-0.18304	-9.6338E-05	0.74345	0.0003913	0.56041	0.00029496	526.324520166758	61.08	1.3849	61.181	59.837	61.222	0.10082					92	55	2	0	0	0	0.7932	1	5222	5222		23.042	1.0826	1	275350			13480	5962	9254	9263	15546	15546					0.11054336193410563
GVLPRWVPK	9	Unmodified	_GVLPRWVPK_					0	0	0		ENSG00000164363|ENST00000324642|SLC6A18	ENSG00000164363|ENST00000324642|SLC6A18	ENSG00000164363|ENST00000324642|SLC6A18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3261108398438	2	526.324194	1050.63383	-0.53497	-0.00028157	1.5071	0.00079323	0.97214	0.00051166	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.77546	1	5249	5249		31.955	0	1	220370			13481	5962	9254	9263	15547	15547					0.11054336193410563
GVLPRWVPK	9	Unmodified	_GVLPRWVPK_					0	0	0		ENSG00000164363|ENST00000324642|SLC6A18	ENSG00000164363|ENST00000324642|SLC6A18	ENSG00000164363|ENST00000324642|SLC6A18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3251953125	2	526.324194	1050.63383	-0.67072	-0.00035302	1.8472	0.00097224	1.1765	0.00061923	526.3250687277414	64.714	3.1276	64.752	62.47	65.598	0.037849					207	130	2	0	0	0	0.7932	1	5635	5635		19.36	1.0356	1	198930			13482	5962	9254	9263	15548	15548					0.11054336193410563
GVLPSPSY	8	Unmodified	_GVLPSPSY_					0	0	0			REV__ENSG00000083290|ENST00000395544|ULK2	REV__ENSG00000083290|ENST00000395544|ULK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.2923889160156	2	410.215986	818.417419	-0.12727	-5.2208E-05	0.25147	0.00010316	0.1242	5.0948E-05	410.21571128307147	72.413	0.50029	72.799	72.458	72.958	0.38581					18	11	2	0	0	0	0.4196	1	8061	8061		44.531	17.735	1	54377	+		13483	16850	9255	9264	15549	15549					0.0009473556905277292
GVLQLVLELLK	11	Unmodified	_GVLQLVLELLK_					0	0	0			REV__ENST00000562306.5_1_15:62534969-62535489:-|nuORF	REV__ENST00000562306.5_1_15:62534969-62535489:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	409.2691345214844	3	408.935713	1223.78531	0.012697	5.1924E-06	-4.249	-0.0017376	-4.2363	-0.0017324	408.933961832912	16.242	0.73024	16.301	16.127	16.857	0.059269					78	32	4	0	0	0	0.74405	1	168	168		23.378	3.3474	1	1215700	+		13484	28797	9256	9265	15550	15550					0.182368527106064
GVLRILKV	8	Unmodified	_GVLRILKV_					0	0	0			REV__ENSG00000204084|ENST00000373024|INPP5B	REV__ENSG00000204084|ENST00000373024|INPP5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.3145446777344	2	449.315838	896.617122	0.030616	1.3756E-05	-2.674	-0.0012015	-2.6434	-0.0011877	449.3144775449266	21.709	1.5646	21.081	20.162	21.727	-0.62835					91	40	3	0	0	0	0.88915	1	863	863		35.201	8.4046	1	615330	+		13485	23454	9257	9266	15551	15551					0.16467835307469159
GVLSILKRNTH	11	Unmodified	_GVLSILKRNTH_					0	0	0		ENST00000440959.2_1_1:180243108-180243874:-|nuORF	ENST00000440959.2_1_1:180243108-180243874:-|nuORF	ENST00000440959.2_1_1:180243108-180243874:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.3720092773438	2	619.372404	1236.73025	0.60184	0.00037276	-0.93131	-0.00057683	-0.32947	-0.00020406	619.3721424545147	101.51	1.6945	101.55	101.22	102.91	0.044823					109	40	4	0	0	0	0.6493	1	10984	10984		38.754	8.1847	1	2715800			13486	11778	9258	9267	15552	15552					0.12135858962687962
GVLSILKRNTH	11	Unmodified	_GVLSILKRNTH_					0	0	0		ENST00000440959.2_1_1:180243108-180243874:-|nuORF	ENST00000440959.2_1_1:180243108-180243874:-|nuORF	ENST00000440959.2_1_1:180243108-180243874:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.3720092773438	2	619.372404	1236.73025	1.9872	0.0012308	-2.1821	-0.0013515	-0.19486	-0.00012069	619.3705755303217	101.25	1.7847	101.55	101.13	102.91	0.2999					90	48	3	0	0	0	0.69995	1	12265	12265		31.53	0	1	2252000			13487	11778	9258	9267	15553	15553					0.12135858962687962
GVLSWRSR	8	Unmodified	_GVLSWRSR_					0	0	0		ENST00000287652.8_1_3:10290066-10290432:+|nuORF	ENST00000287652.8_1_3:10290066-10290432:+|nuORF	ENST00000287652.8_1_3:10290066-10290432:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.77105712890625	2	480.772326	959.530098	0.24382	0.00011722	-1.3425	-0.00064542	-1.0986	-0.0005282	480.7714939481177	40.905	0.58658	40.986	40.702	41.288	0.081345					34	21	2	0	0	0	0.5397	1	2620	2620		73.975	13.003	1	275580			13488	9660	9259	9268	15554	15554					0.04871429085756063
GVLTPLLGL	9	Unmodified	_GVLTPLLGL_					0	0	0		nc|ENSG00000069122|Q8IZF2-3|ADGRF5;nc|ENSG00000069122|Q8IZF2-2|ADGRF5;ENSG00000069122|ENST00000283296|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78778076171875	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.7932	1	2699	2699		25.45	0	1	10215000			13489	1213	9260	9269	15555	15555					0.11308733942325944
GVLVSSFV	8	Unmodified	_GVLVSSFV_					0	0	0		ENST00000575519.1_1_17:6553649-6554890:-|nuORF	ENST00000575519.1_1_17:6553649-6554890:-|nuORF	ENST00000575519.1_1_17:6553649-6554890:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.23187255859375	2	404.234179	806.453805	0.88498	0.00035774	-4.1951	-0.0016958	-3.3101	-0.0013381	404.2323708520731	84.87	3.8747	85.31	83.261	87.136	0.43967					162	94	4	0	0	0	0.82464	1	9940	9940		21.702	1.2205	1	2366300			13490	14051	9261	9270	15556	15556					0.04283612465769693
GVMESMKK	8	Unmodified	_GVMESMKK_					0	0	0		ENSG00000148358|ENST00000347136|GPR107;nc|ENSG00000148358|Q5VW38|GPR107	ENSG00000148358|ENST00000347136|GPR107	ENSG00000148358|ENST00000347136|GPR107	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.23004150390625	2	455.230256	908.445959	0.62809	0.00028592	0.21601	9.8336E-05	0.8441	0.00038426	455.2302883654375	24.344	0.39535	24.399	24.182	24.578	0.055487					15	9	2	0	0	0	0.87479	1	896	896		30.504	1.3541	1	33671			13491	4957	9262	9271	15557	15557					-0.011926061176723124
GVMLALVSDNT	11	Unmodified	_GVMLALVSDNT_					0	0	0		CON__P07224	CON__P07224	CON__P07224	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.2882690429688	2	560.289356	1118.56416	0.42319	0.00023711	-3.3464	-0.0018749	-2.9232	-0.0016378	560.2873712822919	78.48	0.92073	78.426	78.068	78.989	-0.053558					67	24	4	0	0	0	0.51007	1	7812	7812		51.193	4.7359	1	844600		+	13492	589	9263	9272	15558	15558					0.009620446718372477
GVNGPLNE	8	Unmodified	_GVNGPLNE_					0	0	0			REV__nc|ENSG00000167615|Q96PV6-1|LENG8	REV__nc|ENSG00000167615|Q96PV6-1|LENG8	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	400.1969299316406	2	400.200867	798.387182	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.525	1	86.525	86.025	87.025	0								0	0	0	0.30457	1	8248	8248		50.025	0.81375	1		+		13493	21405	9264	9273	15559	15559					-0.02007623096142197
GVNKSRGAVVV	11	Unmodified	_GVNKSRGAVVV_					0	0	0			REV__nc|ENSG00000163738|Q9H903-3|MTHFD2L	REV__nc|ENSG00000163738|Q9H903-3|MTHFD2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.3245239257812	2	543.324922	1084.63529	-1.108	-0.00060199	1.029	0.00055908	-0.078988	-4.2916E-05	543.3253431661017	38.617	0.87661	38.959	38.697	39.574	0.34187					38	20	3	0	0	0	0.26196	1	3177	3177		76.17	12.636	1	1511200	+		13494	16511	9265	9274	15560	15560					0.09635925491511443
GVNQIRMF	8	Unmodified	_GVNQIRMF_					0	0	0			REV__nc|ENSG00000158636|Q7Z589-6|EMSY	REV__nc|ENSG00000158636|Q7Z589-6|EMSY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.75238037109375	2	482.755287	963.496021	-0.53192	-0.00025679	-4.0039	-0.0019329	-4.5359	-0.0021897	482.7532217618567	76.334	0.68707	76.902	76.474	77.162	0.56836					41	18	3	0	0	0	0.73619	1	8696	8696		65.897	9.1764	1	757670	+		13495	20616	9266	9275	15561	15561					0.01281264602482679
GVPGGRGGLGP	11	Unmodified	_GVPGGRGGLGP_					0	0	0			REV__ENST00000379359.3_1_13:42031701-42032475:+|nuORF	REV__ENST00000379359.3_1_13:42031701-42032475:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.255615234375	2	462.256508	922.498464	-1.0307	-0.00047644	-0.95869	-0.00044316	-1.9894	-0.0009196	462.2559435428212	48.824	0.88636	49.283	48.779	49.665	0.45983					43	21	3	0	0	0	0.20203	1	4741	4741		79.451	8.1553	1	4622100	+		13496	25916	9267	9276	15562	15562					0.03411436331816731
GVPGGRGGLGP	11	Unmodified	_GVPGGRGGLGP_					0	0	0			REV__ENST00000379359.3_1_13:42031701-42032475:+|nuORF	REV__ENST00000379359.3_1_13:42031701-42032475:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.25640869140625	2	462.256508	922.498464	-0.14627	-6.7612E-05	-1.5619	-0.00072201	-1.7082	-0.00078963	462.25566302659877	50.35	1.4046	50.798	50.184	51.588	0.4476					68	33	3	0	0	0	0.53495	1	4951	4951		49.442	7.0454	1	1808400	+		13497	25916	9267	9276	15563	15563					0.03411436331816731
GVPGYLPREK	10	Unmodified	_GVPGYLPREK_					0	0	0		ENSG00000084092|ENST00000264230|NOA1	ENSG00000084092|ENST00000264230|NOA1	ENSG00000084092|ENST00000264230|NOA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.3108520507812	2	558.314023	1114.61349	0.38569	0.00021534	-2.9557	-0.0016502	-2.57	-0.0014348	558.3117852271117	48.159	0.46009	48.197	47.991	48.451	0.037735					24	10	4	0	0	0	0.86471	1	3672	3672		30.318	2.4355	1	224270			13498	1511	9268	9277	15564	15564					0.06077120742929765
GVPLERLIRV	10	Unmodified	_GVPLERLIRV_					0	0	0		ENST00000598485.6_2_19:41246882-41255486:-|nuORF;ENSG00000188493|ENST00000378313|ACTMAP	ENST00000598485.6_2_19:41246882-41255486:-|nuORF	ENST00000598485.6_2_19:41246882-41255486:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.369384765625	2	576.36659	1150.71863	0.35965	0.00020729	3.6137	0.0020828	3.9734	0.0022901	576.3684427135254	43.121	1.8301	43.178	42.557	44.387	0.056744					99	45	3	0	0	0	0.86106	1	2995	2995		33.922	3.418	1	329330			13499	7932	9269	9278	15565	15565					0.14929661939368088
GVPLLLSQ	8	Unmodified	_GVPLLLSQ_					0	0	0		ENST00000518085.1_1_5:179290325-179290448:-|nuORF	ENST00000518085.1_1_5:179290325-179290448:-|nuORF	ENST00000518085.1_1_5:179290325-179290448:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.1944580078125	2	413.755278	825.496004	-0.18722	-7.7463E-05	-3.889	-0.0016091	-4.0762	-0.0016866	413.75400498405565	85.362	0.99457	85.43	85.292	86.286	0.067261					32	22	2	0	0	0	0.4196	1	8589	8589		30.504	6.3009	1	97857			13500	13113	9270	9279	15566	15566					0.07627587874139863
GVPLPLPD	8	Unmodified	_GVPLPLPD_					0	0	0		ENST00000520822.5_1_5:179226870-179227569:-|nuORF	ENST00000520822.5_1_5:179226870-179227569:-|nuORF	ENST00000520822.5_1_5:179226870-179227569:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.57470703125	2	404.234179	806.453805	0.80097	0.00032378	-3.6704	-0.0014837	-2.8694	-0.0011599	404.23265517336466	82.082	1.0895	82.508	82.159	83.248	0.42645					39	26	2	0	0	0	0.4196	1	9464	9464		14.664	0	1	184080			13501	13162	9271	9280	15567	15567					0.04283612465758324
GVPPREAPDHA	11	Unmodified	_GVPPREAPDHA_					0	0	0		ENST00000599345.1_1_19:4101110-4123872:-|nuORF	ENST00000599345.1_1_19:4101110-4123872:-|nuORF	ENST00000599345.1_1_19:4101110-4123872:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	573.2858276367188	2	573.288537	1144.56252	-1.3935	-0.00079889	-2.1429	-0.0012285	-3.5364	-0.0020274	573.2873936717183	30.268	1.1577	30.268	29.824	30.981	0					60	39	2	0	0	0	0.58425	1	1365	1365		45.972	10.354	1	122110			13502	14374	9272	9281	15568	15568					-0.003978283019023365
GVPPREAPDHA	11	Unmodified	_GVPPREAPDHA_					0	0	0		ENST00000599345.1_1_19:4101110-4123872:-|nuORF	ENST00000599345.1_1_19:4101110-4123872:-|nuORF	ENST00000599345.1_1_19:4101110-4123872:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	573.288537	1144.56252	0.45748	0.00026227	-1.4074	-0.00080682	-0.94988	-0.00054456	573.788907172428	30.052	0.11604	30.119	30.029	30.145	0.066727	-0.081937	0.0013133	NaN	45.972	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17553			13503	14374	9272	9281							-0.003978283019023365
GVPRIGRSA	9	Unmodified	_GVPRIGRSA_					0	0	0			REV__ENSG00000071677|ENST00000165524|PRLH	REV__ENSG00000071677|ENST00000165524|PRLH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7723693847656	2	456.772326	911.530098	-0.13169	-6.0151E-05	0.064063	2.9262E-05	-0.067625	-3.0889E-05	456.7722620961799	90.094	1.9861	90.163	89.17	91.156	0.068703					88	46	4	0	0	0	0.78058	1	9247	9247		30.504	1.3541	1	947820	+		13504	16627	9273	9282	15569	15569					0.07079429085740685
GVPRPFNG	8	Unmodified	_GVPRPFNG_					0	0	0		L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|20|1|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|20|1|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|20|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2275390625	2	422.22722	842.439886	-1.0391	-0.00043872	2.9759	0.0012565	1.9369	0.0008178	422.2283416890696	64.395	1.1539	64.425	64.021	65.175	0.030243					96	39	3	0	0	0	0.86288	1	5715	5715		26.796	2.5934	1	492400			13505	14575	9274	9283	15570	15570					0.012363797573243573
GVPSPKQTFV	10	Unmodified	_GVPSPKQTFV_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2933349609375	2	530.295299	1058.57605	0.74166	0.0003933	-4.3452	-0.0023043	-3.6036	-0.001911	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.82886	1	9184	9184		37.812	3.639	1	2081200	+		13506	20437;29946	9275	9284	15571	15571					0.049100294773325004
GVPTEEAP	8	Unmodified	_GVPTEEAP_					0	0	0			REV__ENST00000376797.7_1_6:29971059-29975168:-|nuORF	REV__ENST00000376797.7_1_6:29971059-29975168:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.19720458984375	2	400.195251	798.375948	2.7375	0.0010955	-2.8679	-0.0011477	-0.13038	-5.2175E-05	400.19430392281004	82.738	1.2461	82.797	82.427	83.673	0.059166					65	28	4	0	0	0	0.87276	1	8361	8361		29.842	1.5873	1	4511800	+		13507	25846	9276	9285	15572	15572					-0.03130445190288356
GVPTSELV	8	Unmodified	_GVPTSELV_					0	0	0			REV__nc|ENSG00000240764|Q9Y5F6-2|PCDHGC5	REV__nc|ENSG00000240764|Q9Y5F6-2|PCDHGC5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2220764160156	2	401.221268	800.427984	0.2725	0.00010933	2.1154	0.00084876	2.3879	0.00095809	401.2219254800666	30.719	1.1019	30.759	30.329	31.431	0.039999					46	24	3	0	0	0	0.89567	1	2043	2043		57.453	2.688	1	330060	+		13508	23815	9277	9286	15573	15573					0.01978718223483611
GVQKVPAL	8	Unmodified	_GVQKVPAL_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2574768066406	2	406.255446	810.496338	1.9631	0.00079754	2.4509	0.00099569	4.414	0.0017932	406.25639366891517	55.168	1.6481	55.195	54.525	56.173	0.027142					71	44	2	0	0	0	0.86288	1	4941	4941		26.796	1.3459	1	211340			13509	3360	9278	9287	15574	15574					0.08351007593978466
GVQKVPAL	8	Unmodified	_GVQKVPAL_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.255446	810.496338	-1.6544	-0.00067213	5.709	0.0023193	4.0546	0.0016472	406.2576772673807	55.635	1.5105	55.635	54.763	56.274	0	0.38148	0.00073155	NaN	26.796	79	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	163990			13510	3360	9278	9287							0.08351007593978466
GVQKVPAL	8	Unmodified	_GVQKVPAL_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	406.255446	810.496338	-0.14311	-5.8138E-05	4.8125	0.0019551	4.6694	0.001897	406.25731677188577	55.259	1.775	55.252	54.436	56.211	-0.0077057	-0.0021566	3.1641E-06	NaN	26.796	87	52	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	271420			13511	3360	9278	9287							0.08351007593978466
GVQKVPAL	8	Unmodified	_GVQKVPAL_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.255446	810.496338	-0.50499	-0.00020516	4.7479	0.0019289	4.2429	0.0017237	406.2573253732307	55.256	1.7276	55.229	54.396	56.123	-0.027111	-0.024593	-4.9357E-05	NaN	26.796	77	49	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	243180			13512	3360	9278	9287							0.08351007593978466
GVQKVPAL	8	Unmodified	_GVQKVPAL_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.8744	-0.0007615	6.3496	0.0025795	4.4751	0.001818	406.2579546670216	55.03	1.9887	55.09	54.261	56.25	0.059467	-0.16404	0.001252	NaN	26.796	120	73	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	355710			13513	3360	9278	9287							0.08351007593978466
GVQSSQKSLI	10	Unmodified	_GVQSSQKSLI_					0	0	0			REV__ENST00000449305.5_1_1:93805081-93811232:-|nuORF	REV__ENST00000449305.5_1_1:93805081-93811232:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7944946289062	2	523.795663	1045.57677	0.20589	0.00010784	-3.4848	-0.0018253	-3.2789	-0.0017175	523.7937468382506	19.848	1.1814	19.218	18.937	20.118	-0.6296					65	25	3	0	0	0	0.8545	1	634	634		36.447	2.5251	1	863270	+		13514	26393	9279	9288	15575	15575					0.055808241263775926
GVQTAHFVLH	10	Unmodified	_GVQTAHFVLH_					0	0	0		ENST00000551200.5_1_12:102471044-102512308:-|nuORF;ENSG00000075188|ENST00000552283|NUP37	ENST00000551200.5_1_12:102471044-102512308:-|nuORF	ENST00000551200.5_1_12:102471044-102512308:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.7962036132812	2	554.79854	1107.58253	0.9008	0.00049976	-4.4429	-0.0024649	-3.5421	-0.0019651	554.7958908144287	26.927	0.75191	26.899	26.557	27.309	-0.027706					40	18	3	0	0	0	0.44803	1	1198	1198		60.118	3.6845	1	237050			13515	1321	9280	9289	15576	15576					0.03303967428701071
GVRDLRKVLAL	11	Unmodified	_GVRDLRKVLAL_					0	0	0		ENSG00000184867|ENST00000356824|ARMCX2	ENSG00000184867|ENST00000356824|ARMCX2	ENSG00000184867|ENST00000356824|ARMCX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.9322204589844	3	413.934706	1238.78229	-1.1382	-0.00047114	-3.9325	-0.0016278	-5.0707	-0.002099	413.9330056480743	43.336	2.2043	43.3	41.98	44.184	-0.03582					131	52	3	0	0	0	0.74405	1	3488	3488		23.378	0.79825	1	471060			13516	7648	9281	9290	15577	15577					0.1724502237645993
GVRGAPVR	8	Unmodified	_GVRGAPVR_					0	0	0			REV__ENST00000409160.7_1_2:239147470-239147986:-|nuORF	REV__ENST00000409160.7_1_2:239147470-239147986:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2484436035156	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.80706	1	9168	9168		19.36	0	1	56664000	+		13517	26336	9282	9291	15578	15578					0.06959774885558545
GVRGAPVR	8	Unmodified	_GVRGAPVR_					0	0	0			REV__ENST00000409160.7_1_2:239147470-239147986:-|nuORF	REV__ENST00000409160.7_1_2:239147470-239147986:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2485656738281	2	406.248486	810.48242	3.1805	0.0012921	-2.5321	-0.0010287	0.64845	0.00026343	406.2473596194762	111.52	0.96954	111.55	111.15	112.12	0.030388					88	37	3	0	0	0	0.81548	1	12222	12222		20.482	1.1219	1	158570	+		13518	26336	9282	9291	15579	15579					0.06959774885558545
GVRGAVRP	8	Unmodified	_GVRGAVRP_					0	0	0		ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2471923828125	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.7	1	116.68	116.18	117.18	-0.02433								0	0	0	0.30125	1	12928	12928		20.482	5.8177	1				13519	9893	9283	9292	15580	15580					0.06959774885558545
GVRGAVRP	8	Unmodified	_GVRGAVRP_					0	0	0		ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2484130859375	2	406.248486	810.48242	-1.8141	-0.00073698	2.0083	0.00081588	0.1942	7.8892E-05	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.90465	1	8885	8885		40.573	1.7665	1	42617000			13520	9893	9283	9292	15581	15581					0.06959774885558545
GVRGAVRP	8	Unmodified	_GVRGAVRP_					0	0	0		ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2483215332031	2	406.248486	810.48242	-1.9277	-0.00078311	2.2054	0.00089595	0.27775	0.00011283	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.86288	1	8843	8843		26.796	1.3459	1	31099000			13521	9893	9283	9292	15582	15582					0.06959774885558545
GVRGAVRP	8	Unmodified	_GVRGAVRP_					0	0	0		ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24847412109375	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.85277	1	10448	10448		25.45	4.9683	1	28266000			13522	9893	9283	9292	15583	15583					0.06959774885558545
GVRGAVRP	8	Unmodified	_GVRGAVRP_					0	0	0		ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.248291015625	2	406.248486	810.48242	3.144	0.0012772	-2.6463	-0.0010751	0.49768	0.00020218	406.2473237922933	114.03	1.1173	114.05	113.12	114.24	0.020027					74	50	2	0	0	0	0.81548	1	13742	13742		20.482	0	1	65995			13523	9893	9283	9292	15584	15584					0.06959774885558545
GVRGCGPP	8	Carbamidomethyl (C)	_GVRGC(Carbamidomethyl (C))GPP_	GVRGC(1)GPP		GVRGC(45)GPP		0	1	0			REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	400.1979064941406	2	400.197605	798.380657	-1.2559	-0.00050262	-3.5399	-0.0014167	-4.7958	-0.0019193	400.19654936320705	82.902	0.71272	82.902	82.649	83.362	0					40	17	3	0	0	0	0.9159	2	7793	7761;7793		54.765	12.576	1	809630	+		13524	25307	9284	9293	15585;15586	15586	310				-0.02659839528507746
GVRGCGPP	8	Carbamidomethyl (C)	_GVRGC(Carbamidomethyl (C))GPP_	GVRGC(1)GPP		GVRGC(47)GPP		0	1	0			REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.1980285644531	2	400.197605	798.380657	-1.8242	-0.00073005	-3.8427	-0.0015379	-5.667	-0.0022679	400.196324479631	82.498	1.2255	82.653	82.3	83.526	0.15474					77	28	4	0	0	0	0.92176	2	8004	7916;8004		54.765	9.738	1	6786400	+		13525	25307	9284	9293	15587;15588	15588	310				-0.02659839528507746
GVRGCGPP	8	Carbamidomethyl (C)	_GVRGC(Carbamidomethyl (C))GPP_	GVRGC(1)GPP		GVRGC(45)GPP		0	1	0			REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.1966857910156	2	400.197605	798.380657	-1.8178	-0.00072749	-3.3867	-0.0013554	-5.2045	-0.0020828	400.1965321988101	85.961	1.4792	86.146	85.747	87.226	0.18523					86	34	4	0	0	0	0.9159	3	8410	8410;8434;8459		54.765	15.743	1	5691500	+		13526	25307	9284	9293	15589;15590;15591	15589	310				-0.02659839528507746
GVRGCGPP	8	Carbamidomethyl (C)	_GVRGC(Carbamidomethyl (C))GPP_	GVRGC(1)GPP		GVRGC(55)GPP		0	1	0			REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.19671630859375	2	400.197605	798.380657	-1.7396	-0.00069617	-3.5703	-0.0014288	-5.3099	-0.002125	400.1964299805563	82.569	1.537	82.695	82.281	83.818	0.12601					84	35	4	0	0	0	0.94132	3	7890	7890;7924;7936		54.765	15.743	1	5438900	+		13527	25307	9284	9293	15592;15593;15594	15592	310				-0.02659839528507746
GVRGCGPP	8	Carbamidomethyl (C)	_GVRGC(Carbamidomethyl (C))GPP_	GVRGC(1)GPP		GVRGC(47)GPP		0	1	0			REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.196533203125	2	400.197605	798.380657	-1.8641	-0.00074599	-3.5794	-0.0014325	-5.4435	-0.0021785	400.1964135469885	86.084	1.1453	86.243	85.89	87.035	0.15851					68	26	3	0	0	0	0.92176	2	8429	8429;8441		46.766	7.7449	1	5235800	+		13528	25307	9284	9293	15595;15596	15595	310				-0.02659839528507746
GVRGRPGL	8	Unmodified	_GVRGRPGL_					0	0	0		ENST00000204961.4_1_X:68060969-68061182:+|nuORF	ENST00000204961.4_1_X:68060969-68061182:+|nuORF	ENST00000204961.4_1_X:68060969-68061182:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2480773925781	2	406.248486	810.48242	1.1517	0.00046786	-0.91843	-0.00037311	0.23322	9.4746E-05	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.86288	1	9464	9464		26.796	1.3459	1	58759000			13529	9102	9285	9294	15597	15597					0.06959774885547176
GVRGVPGKA	9	Unmodified	_GVRGVPGKA_					0	0	0		ENST00000545177.4_1_6:2858153-2876648:-|nuORF	ENST00000545177.4_1_6:2858153-2876648:-|nuORF	ENST00000545177.4_1_6:2858153-2876648:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7545471191406	2	420.756144	839.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.719	1	21.275	20.775	21.775	-0.44324								0	0	0	0.30053	1	812	812		30.504	2.6214	1				13530	13575	9286	9295	15598	15598					0.07156641682740883
GVRKGGPH	8	Unmodified	_GVRKGGPH_					0	0	0			REV__ENST00000336314.8_2_5:154194694-154195063:+|nuORF	REV__ENST00000336314.8_2_5:154194694-154195063:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.57501220703125	2	404.232836	806.45112	-1.7241	-0.00069694	1.5829	0.00063985	-0.14124	-5.7093E-05	404.2333864251582	82.208	2.1135	82.334	81.139	83.253	0.12601					89	49	3	0	0	0	0.4196	1	7709	7709		39.021	9.18	1	249400	+		13531	25187	9287	9296	15599	15599					0.040152018514731935
GVRKQPEN	8	Unmodified	_GVRKQPEN_					0	0	0		L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|76|2|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|76|2|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|76|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2537536621094	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.89962	1	9932	9932		38.806	1.7777	1	1215000			13532	14552	9288	9297	15600	15600					0.027191324691784757
GVRLKARSY	9	Unmodified	_GVRLKARSY_					0	0	0		ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11	ENSG00000138758|ENST00000264893|SEPTIN11	ENSG00000138758|ENST00000264893|SEPTIN11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.241455078125	2	525.314358	1048.61416	0.16362	8.5949E-05	2.4322	0.0012777	2.5958	0.0013636	525.3156258651622	74.036	0.47105	74.595	74.369	74.84	0.55891					17	10	2	0	0	0	0.20789	1	8375	8375		35.618	3.6634	1	156590			13533	4326	9289	9298	15601	15601					0.09179960182632385
GVRLRESIVLH	11	Unmodified	_GVRLRESIVLH_					0	0	0		ENSG00000144591|ENST00000313597|GMPPA;nc|ENSG00000144591|Q96IJ6-2|GMPPA	ENSG00000144591|ENST00000313597|GMPPA	ENSG00000144591|ENST00000313597|GMPPA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	427.302978515625	3	426.926211	1277.7568	-1.1773	-0.00050264	4.1029	0.0017516	2.9255	0.001249	427.26247003174075	68.899	0.082741	68.965	68.894	68.976	0.065506					4	2	2	0	0	0	0.17537	1	6195	6195		20.03	0	1	26863			13534	4720	9290	9299	15602	15602					0.12903547854034514
GVRRKSAV	8	Unmodified	_GVRRKSAV_					0	0	0		ENST00000296525.7_1_4:177190179-177190299:-|nuORF	ENST00000296525.7_1_4:177190179-177190299:-|nuORF	ENST00000296525.7_1_4:177190179-177190299:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2725830078125	2	436.774868	871.535184	-0.34985	-0.00015281	-2.9642	-0.0012947	-3.314	-0.0014475	436.77383375696394	27.418	1.1225	27.379	27.041	28.164	-0.038523					45	25	2	0	0	0	0.87064	1	1350	1350		29.15	2.4566	1	85606			13535	9737	9291	9300	15603	15603					0.09427732948370249
GVRRRGPAPDQ	11	Unmodified	_GVRRRGPAPDQ_					0	0	0			REV__ENST00000468090.5_1_21:45181177-45181723:+|nuORF	REV__ENST00000468090.5_1_21:45181177-45181723:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.559814453125	3	403.55841	1207.6534	2.8514	0.0011507	1.1792	0.00047587	4.0306	0.0016266	403.5587881215693	22.775	1.0826	22.725	22.354	23.437	-0.050077					94	41	3	0	0	0	0.72374	1	727	727		27.644	2.5179	1	140620	+		13536	27176	9292	9301	15604	15604					0.05788060466238676
GVRYLLRYRL	10	Unmodified	_GVRYLLRYRL_					0	0	0		ENST00000462887.1_1_10:99496996-99498486:+|nuORF	ENST00000462887.1_1_10:99496996-99498486:+|nuORF	ENST00000462887.1_1_10:99496996-99498486:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.9339294433594	3	436.934818	1307.78262	0.27454	0.00011996	-2.2259	-0.00097255	-1.9513	-0.00085259	436.9337888157145	20.681	2.5222	20.051	19.49	22.012	-0.62961					153	62	4	0	0	0	0.85834	1	719	719		22.58	0.89391	1	646260			13537	12054	9293	9302	15605	15605					0.14104442096299863
GVSAILPLLE	10	Unmodified	_GVSAILPLLE_					0	0	0		ENST00000227451.3_1_11:58972400-58972907:+|nuORF	ENST00000227451.3_1_11:58972400-58972907:+|nuORF	ENST00000227451.3_1_11:58972400-58972907:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3078308105469	2	506.307875	1010.6012	-0.11528	-5.8369E-05	2.3887	0.0012094	2.2734	0.001151	506.30895339856204	46.446	1.9227	46.367	45.268	47.19	-0.079002					66	54	2	0	0	0	0.86589	1	3257	3257		29.15	3.6994	1	167080			13538	9198	9294	9303	15606	15606					0.09632084279905939
GVSEKRLTSL	10	Unmodified	_GVSEKRLTSL_					0	0	0		ENSG00000128656|ENST00000409900|CHN1	ENSG00000128656|ENST00000409900|CHN1	ENSG00000128656|ENST00000409900|CHN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3169555664062	2	545.316763	1088.61897	-0.33932	-0.00018504	0.19506	0.00010637	-0.14427	-7.8672E-05	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.85981	1	8850	8850		35.152	3.6222	1	4710900			13539	3559	9295	9304	15607	15607					0.07820799534761136
GVSENILQVHL	11	Unmodified	_GVSENILQVHL_					0	0	0		CON__Q2YDI2	CON__Q2YDI2	CON__Q2YDI2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.55853271484375	3	403.559305	1207.65609	0.70065	0.00028275	1.0269	0.00041442	1.7276	0.00069717	403.5596050855879	22.48	0.98659	22.545	22.232	23.218	0.064745					76	37	3	0	0	0	0.638	1	720	720		40.058	18.372	1	100540		+	13540	617	9296	9305	15608	15608					0.06056471080546544
GVSGDASTN	9	Unmodified	_GVSGDASTN_					0	0	0		nc|ENSG00000100578|Q9BVV6-3|KIAA0586;ENST00000538571.6_1_14:58909433-59003756:+|nuORF;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586;ENSG00000100578|ENST00000652326|KIAA0586	nc|ENSG00000100578|Q9BVV6-3|KIAA0586	nc|ENSG00000100578|Q9BVV6-3|KIAA0586	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.171630859375	2	404.177589	806.340626	2.7772	0.0011225	3.9126	0.0015814	6.6898	0.0027038	404.17842514621145	27.427	0.28859	27.4	27.267	27.556	-0.027704					12	6	3	0	0	0	0.20789	1	1248	1248		14.865	0	1	7119.6			13541	14815	9297	9306	15609	15609					-0.07029107718096839
GVSGPRPR	8	Unmodified	_GVSGPRPR_					0	0	0			REV__ENSG00000140323|ENST00000267889|DISP2	REV__ENSG00000140323|ENST00000267889|DISP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.23712158203125	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.89494	1	7495	7495		37.159	8.0096	1	1692300	+		13542	19606	9298	9307	15610	15610					0.04243184505889985
GVSGSCTTQ	9	Unmodified	_GVSGSCTTQ_					0	0	0		ENSG00000075290|ENST00000343737|WNT8B	ENSG00000075290|ENST00000343737|WNT8B	ENSG00000075290|ENST00000343737|WNT8B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1842956542969	2	420.181817	838.349082	2.1208	0.00089113	3.84	0.0016135	5.9609	0.0025047	420.1841063051661	100.01	0.66774	100.36	100.03	100.69	0.3459					28	16	3	0	0	0	0.20789	1	12144	12144		21.96	16.402	1	1145400			13543	1329	9299	9308	15611	15611					-0.07655877073125339
GVSGSPTKSKV	11	Unmodified	_GVSGSPTKSKV_					0	0	0		ENST00000493227.1_1_7:7622738-7646720:+|nuORF;ENSG00000164654|ENST00000340080|MIOS	ENST00000493227.1_1_7:7622738-7646720:+|nuORF	ENST00000493227.1_1_7:7622738-7646720:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.79345703125	2	523.795663	1045.57677	0.099108	5.1912E-05	-3.5431	-0.0018559	-3.444	-0.001804	523.7937036505126	19.091	1.2071	19.017	18.843	20.05	-0.073702					63	35	3	0	0	0	0.72106	1	435	435		28.081	3.8787	1	115810			13544	5985	9300	9309	15612	15612					0.05580824126354855
GVSHHTRPRA	10	Unmodified	_GVSHHTRPRA_					0	0	0		chr10:90887688-90894775|15|10.13|0.54|4.24|+|0|None,RPP30|1	chr10:90887688-90894775|15|10.13|0.54|4.24|+|0|None,RPP30|1	chr10:90887688-90894775|15|10.13|0.54|4.24|+|0|None,RPP30|1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	559.3001098632812	2	559.302313	1116.59007	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.849	1	26.849	26.349	27.349	0								0	0	0	0.45132	1	1042	1042		30.318	2.4355	1				13545	91	9301	9310	15613	15613					0.03644119748992125
GVSKAQKMK	9	Unmodified	_GVSKAQKMK_					0	0	0			REV__ENST00000529199.1_1_11:66333209-66333615:-|nuORF	REV__ENST00000529199.1_1_11:66333209-66333615:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.6285400390625	2	488.784044	975.553536	0.1779	8.6955E-05	-0.66239	-0.00032376	-0.48449	-0.00023681	488.783466663114	17.062	0.17256	16.452	16.348	16.52	-0.6107					5	3	2	0	0	0	0.20789	1	210	210		24.519	8.883	1	31698	+		13546	21972	9302	9311	15614	15614					0.06478106808060602
GVSKLPARQLR	11	Unmodified	_GVSKLPARQLR_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.9220886230469	3	408.922689	1223.74624	-0.18603	-7.607E-05	-0.74679	-0.00030538	-0.93282	-0.00038145	408.9223182552884	104.73	3.6152	104.72	103.66	107.27	-0.014809					241	85	5	0	0	0	0.7434	1	11274	11274		15.921	0	1	2991100	+		13547	23882	9303	9312	15615	15615					0.14331565199586294
GVSLAAHLSH	10	Unmodified	_GVSLAAHLSH_					0	0	0		ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4;nc|ENSG00000128829|Q9P2K8-3|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7537536621094	2	496.269616	990.524678	1.0802	0.00053609	-0.7914	-0.00039275	0.28884	0.00014334	496.26855052459337	27.671	0.39101	27.416	27.196	27.587	-0.25465					12	8	2	0	0	0	0.37624	1	1609	1609		87.754	10.98	1	27158			13548	3562	9304	9313	15616	15616					0.029037055032858916
GVSLLQPT	8	Unmodified	_GVSLLQPT_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852783203125	2	407.737086	813.459619	0.23245	9.4779E-05	1.0531	0.00042938	1.2855	0.00052415	407.7371841977257	29.295	0.4208	29.326	29.16	29.581	0.030947					24	13	3	0	0	0	0.4196	1	1459	1459		16.473	4.2663	1	27662	+		13549	26848	9305	9314	15617	15617					0.04542710977432307
GVSLLQPT	8	Unmodified	_GVSLLQPT_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	407.737086	813.459619	-1.9227	-0.00078396	5.5856	0.0022775	3.6629	0.0014935	407.73838432900595	29.298	0.12551	29.365	29.256	29.381	0.066727	0.019663	0.0045134	NaN	16.473	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15171	+		13550	26848	9305	9314							0.04542710977432307
GVSLNLTRKFA	11	Unmodified	_GVSLNLTRKFA_					0	0	0		ENSG00000157540|ENST00000647188|DYRK1A;nc|ENSG00000157540|Q13627|DYRK1A;nc|ENSG00000157540|Q13627-4|DYRK1A;nc|ENSG00000157540|Q13627-3|DYRK1A;nc|ENSG00000157540|Q13627-5|DYRK1A	ENSG00000157540|ENST00000647188|DYRK1A	ENSG00000157540|ENST00000647188|DYRK1A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.25225830078125	3	402.571545	1204.69281	-0.17461	-7.0295E-05	-3.0402	-0.0012239	-3.2149	-0.0012942	402.57023166004245	21.25	0.42936	20.622	20.374	20.804	-0.62834					19	11	2	0	0	0	0.17863	1	770	770		14.086	0	1	55087			13551	5437	9306	9315	15618	15618					0.09864767697081334
GVSLQYVF	8	Unmodified	_GVSLQYVF_					0	0	0		ENST00000504557.1_1_12:54388684-54396343:+|nuORF	ENST00000504557.1_1_12:54388684-54396343:+|nuORF	ENST00000504557.1_1_12:54388684-54396343:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7932434082031	2	456.744911	911.475269	-0.25646	-0.00011714	0.28258	0.00012906	0.026116	1.1929E-05	456.745143996204	37.345	0.6894	37.659	37.329	38.018	0.31312					23	16	2	0	0	0	0.4196	1	2977	2977		50.025	0	1	212980			13552	12906	9307	9316	15619	15619					0.01598997494465948
GVSLREFM	8	Unmodified	_GVSLREFM_					0	0	0		ENSG00000185352|ENST00000376705|HS6ST3	ENSG00000185352|ENST00000376705|HS6ST3	ENSG00000185352|ENST00000376705|HS6ST3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.7427978515625	2	469.741845	937.469137	0.66937	0.00031443	1.8393	0.00086402	2.5087	0.0011785	469.7424385076299	23.738	0.55278	23.164	22.92	23.472	-0.57415					30	12	4	0	0	0	0.91977	1	1090	1090		45.952	3.4775	1	314830			13553	7705	9308	9317	15620	15620					-0.0020984400870247555
GVSLREFM	8	Unmodified	_GVSLREFM_					0	0	0		ENSG00000185352|ENST00000376705|HS6ST3	ENSG00000185352|ENST00000376705|HS6ST3	ENSG00000185352|ENST00000376705|HS6ST3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	469.741845	937.469137	0.40639	0.0001909	1.9807	0.00093042	2.3871	0.0011213	469.7427004875054	23.753	0.73233	23.372	23.018	23.75	-0.38178	0.10399	4.2987E-05	NaN	45.952	31	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	302450			13554	7705	9308	9317							-0.0020984400870247555
GVSLTSGLNL	10	Unmodified	_GVSLTSGLNL_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|202|1|anti-sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|202|1|anti-sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|202|1|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.77105712890625	2	480.771657	959.528761	0.27327	0.00013138	-0.54162	-0.00026039	-0.26835	-0.00012901	480.77122608691184	41.141	0.55666	41.11	40.864	41.421	-0.030991					39	15	3	0	0	0	0.73395	1	2992	2992		42.864	0.46813	1	435130			13555	14505	9309	9318	15621	15621					0.04737750206322744
GVSQTPGR	8	Unmodified	_GVSQTPGR_					0	0	0			REV__ENSG00000179083|ENST00000683942|FAM133A	REV__ENSG00000179083|ENST00000683942|FAM133A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	401.8036804199219	2	401.214309	800.414065	-1.9386	-0.00077778	0.30886	0.00012392	-1.6297	-0.00065386	401.21557562584053	18.507	0.087729	18.551	18.498	18.586	0.044048					5	3	2	0	0	0	0.4196	1	334	334		7.1934	0	1	10956	+		13556	15955	9310	9319	15622	15622					0.00587485515040953
GVSTLVLDA	9	Unmodified	_GVSTLVLDA_					0	0	0			REV__CON__Q2KJF1	REV__CON__Q2KJF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2647399902344	2	437.74765	873.480748	0.21288	9.3186E-05	-0.29208	-0.00012786	-0.079208	-3.4673E-05	437.74740591023846	42.455	0.83459	42.52	42.201	43.035	0.065037					38	24	2	0	0	0	0.20789	1	2859	2859		10.265	0	1	158810	+	+	13557	16005	9311	9320	15623	15623					0.03894676286267895
GVSVLVHW	8	Unmodified	_GVSVLVHW_					0	0	0			REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.7514953613281	2	448.75307	895.491587	-1.1604	-0.00052074	-3.0125	-0.0013519	-4.1729	-0.0018726	448.75149624669854	27.493	1.0894	27.318	27.016	28.105	-0.17559					64	24	5	0	0	0	0.9159	1	1616	1616		44.531	7.372	1	1128500	+		13558	27703	9312	9321	15624	15624					0.039661234512209376
GVSVTQIKE	9	Unmodified	_GVSVTQIKE_					0	0	0		ENST00000439119.5_1_22:21389692-21399270:-|nuORF;nc|ENSG00000099957|O15547-2|P2RX6;ENSG00000099957|ENST00000413302|P2RX6	ENST00000439119.5_1_22:21389692-21399270:-|nuORF	ENST00000439119.5_1_22:21389692-21399270:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.7696228027344	2	480.771657	959.528761	0.27327	0.00013138	-0.54162	-0.00026039	-0.26835	-0.00012901	480.77122608691184	41.141	0.55666	41.11	40.864	41.421	-0.030991					39	15	3	0	0	0	0.33718	1	2971	2971		62.107	0	1	435130			13559	11759	9313	9322	15625	15625					0.04737750206322744
GVSVVFAK	8	Unmodified	_GVSVVFAK_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.2129211425781	2	403.742171	805.469789	1.5187	0.00061315	-1.3755	-0.00055534	0.14318	5.781E-05	403.74151064962064	33.198	0.54966	33.367	33.103	33.653	0.16971					20	12	2	0	0	0	0.4196	1	2398	2398		3.9852	0	1	377250	+		13560	20385;29943	9314	9323	15626	15626					0.05927318702663342
GVTFVVVL	8	Unmodified	_GVTFVVVL_					0	0	0		nc|ENSG00000162267|Q06033-2|ITIH3;ENSG00000162267|ENST00000449956|ITIH3;CON__Q0V8M9;ENST00000493136.1_1_3:52840081-52842694:+|nuORF	nc|ENSG00000162267|Q06033-2|ITIH3	nc|ENSG00000162267|Q06033-2|ITIH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.25726318359375	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.86791	1	600	600		28.254	0	1	817900		+	13561	604	9315	9324	15627	15627					0.08288775879520927
GVTHDHED	8	Unmodified	_GVTHDHED_					0	0	0		ENSG00000268089|ENST00000598523|GABRQ	ENSG00000268089|ENST00000598523|GABRQ	ENSG00000268089|ENST00000598523|GABRQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.1882629394531	2	455.188488	908.362424	0.60873	0.00027709	-0.61133	-0.00027827	-0.0025977	-1.1824E-06	455.18802348400374	24.617	1.0295	24.67	24.085	25.115	0.052359					35	27	2	0	0	0	0.85277	1	919	919		25.45	1.2474	1	44423			13562	8961	9316	9325	15628	15628					-0.09542302969521188
GVTIGPLPKH	10	Unmodified	_GVTIGPLPKH_					0	0	0			REV__nc|ENSG00000161533|Q15067-3|ACOX1	REV__nc|ENSG00000161533|Q15067-3|ACOX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8037414550781	2	509.805834	1017.59712	-1.4574	-0.000743	-2.7703	-0.0014123	-4.2277	-0.0021553	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.86718	1	8058	8058		27.882	2.3082	1	920080	+		13563	20767	9317	9326	15629	15629					0.08902039576832976
GVTIYHGT	8	Unmodified	_GVTIYHGT_					0	0	0		ENSG00000181698|ENST00000641665|OR5T1;ENSG00000172489|ENST00000313033|OR5T3;nc|ENSG00000172489|Q8NGG3|OR5T3	ENSG00000181698|ENST00000641665|OR5T1	ENSG00000181698|ENST00000641665|OR5T1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.2187805175781	2	424.21906	846.423567	-0.1837	-7.7928E-05	-1.1351	-0.00048152	-1.3188	-0.00055944	424.2185287134354	101.66	1.8082	101.68	101.04	102.85	0.01989					87	43	4	0	0	0	0.884	1	10925	10925		33.516	4.366	1	1878300			13564	7399	9318	9327	15630	15630					-0.005787461994145815
GVTLFAII	8	Unmodified	_GVTLFAII_					0	0	0			REV__ENSG00000124786|ENST00000644923|SLC35B3	REV__ENSG00000124786|ENST00000644923|SLC35B3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25799560546875	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.86791	1	559	559		28.254	0	1	679020	+		13565	18613	9319	9328	15631	15631					0.08288775879520927
GVTLHISIYT	10	Unmodified	_GVTLHISIYT_					0	0	0			REV__ENST00000399540.2_1_17:6905609-6905768:-|nuORF	REV__ENST00000399540.2_1_17:6905609-6905768:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.306396484375	2	552.308406	1102.60226	0.26261	0.00014504	-3.8233	-0.0021116	-3.5607	-0.0019666	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.8608	1	9348	9348		34.173	1.3601	1	1950800	+		13566	26229	9320	9329	15632	15632					0.055062986488110255
GVTLVYSL	8	Unmodified	_GVTLVYSL_					0	0	0			REV__nc|ENSG00000166881|O14524-2|NEMP1	REV__nc|ENSG00000166881|O14524-2|NEMP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2460021972656	2	426.247286	850.48002	-0.1821	-7.7619E-05	-2.626	-0.0011193	-2.8081	-0.0011969	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.84341	1	8872	8872		24.203	2.2429	1	3805200	+		13567	15550	9321	9330	15633	15633					0.04879881637236849
GVTLVYSL	8	Unmodified	_GVTLVYSL_					0	0	0			REV__nc|ENSG00000166881|O14524-2|NEMP1	REV__nc|ENSG00000166881|O14524-2|NEMP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.24609375	2	426.247286	850.48002	-1.843	-0.00078557	-1.0037	-0.00042784	-2.8467	-0.0012134	426.2467741737408	87.495	4.0009	87.665	85.686	89.687	0.16922					180	93	4	0	0	0	0.89962	1	8632	8632		38.806	5.2906	1	3180100	+		13568	15550	9321	9330	15634	15634					0.04879881637236849
GVTPILGII	9	Unmodified	_GVTPILGII_					0	0	0			REV__ENSG00000187775|ENST00000389840|DNAH17	REV__ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.787353515625	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.78058	1	3604	3604		30.504	6.3009	1	493390	+		13569	22946	9322	9331	15635	15635					0.11308733942325944
GVTPILHA	8	Unmodified	_GVTPILHA_					0	0	0		ENST00000597244.1_1_19:16688850-16689066:-|nuORF	ENST00000597244.1_1_19:16688850-16689066:-|nuORF	ENST00000597244.1_1_19:16688850-16689066:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.9225158691406	2	404.239796	806.465038	2.7924	0.0011288	-4.3885	-0.001774	-1.5961	-0.0006452	404.2386799543184	26.431	1.2924	26.399	25.886	27.178	-0.032125					51	31	3	0	0	0	0.4196	1	1196	1196		25.45	0	1	31193			13570	14349	9323	9332	15636	15636					0.05406434559893114
GVTTWIQT	8	Unmodified	_GVTTWIQT_					0	0	0		ENSG00000113805|ENST00000263665|CNTN3	ENSG00000113805|ENST00000263665|CNTN3	ENSG00000113805|ENST00000263665|CNTN3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7666015625	2	453.239993	904.465432	-2.681	-0.0012151	1.3314	0.00060346	-1.3496	-0.00061168	453.2402745999524	41.94	0.38047	42.354	42.086	42.466	0.4139					14	9	2	0	0	0	0.4196	1	3674	3674		20.947	0	1	102880			13571	2746	9324	9333	15637	15637					0.00937809489096253
GVVDIPIVE	9	Unmodified	_GVVDIPIVE_					0	0	0		ENSG00000165526|ENST00000298317|RPUSD4;nc|ENSG00000165526|Q96CM3-2|RPUSD4;ENST00000530903.1_1_11:126073315-126075741:-|nuORF	ENSG00000165526|ENST00000298317|RPUSD4	ENSG00000165526|ENST00000298317|RPUSD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76885986328125	2	470.771126	939.527698	-0.31282	-0.00014727	-3.864	-0.0018191	-4.1769	-0.0019664	470.7690962660208	80.864	0.77295	81.286	80.933	81.706	0.4215					52	18	4	0	0	0	0.64922	1	9336	9336		44.117	3.5442	1	1358000			13572	6092	9325	9334	15638	15638					0.05551535837423671
GVVEYGCV	8	Unmodified	_GVVEYGCV_					0	0	0			REV__ENST00000304363.8_2_11:67957478-67957571:-|nuORF	REV__ENST00000304363.8_2_11:67957478-67957571:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1939697265625	2	413.194196	824.37384	-0.086313	-3.5664E-05	-2.3678	-0.00097836	-2.4541	-0.001014	413.1936016248627	77.941	2.7232	78.504	78.093	80.816	0.56332					177	64	5	0	0	0	0.87276	1	8992	8992		29.842	1.5873	1	6380300	+		13573	24808	9326	9335	15639	15639					-0.0453719719973833
GVVFLISALH	10	Unmodified	_GVVFLISALH_					0	0	0			REV__ENSG00000132429|ENST00000254765|POPDC3	REV__ENSG00000132429|ENST00000254765|POPDC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.3130493164062	2	528.316035	1054.61752	-0.035772	-1.8899E-05	-3.4565	-0.0018261	-3.4923	-0.001845	528.3142278244472	98.548	1.1039	98.598	98.087	99.191	0.04982					64	24	4	0	0	0	0.67608	1	10415	10415		45.952	10.751	1	426950	+		13574	19003	9327	9336	15640	15640					0.09239210236660256
GVVITVLDDGL	11	Unmodified	_GVVITVLDDGL_					0	0	0		ENSG00000175426|ENST00000311106|PCSK1;nc|ENSG00000175426|P29120-2|PCSK1	ENSG00000175426|ENST00000311106|PCSK1	ENSG00000175426|ENST00000311106|PCSK1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.81591796875	2	550.813522	1099.61249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.65	1	26.622	26.122	27.122	-0.027706								0	0	0	0.56276	1	1152	1152		32.812	1.2826	1				13575	7015	9328	9337	15641	15641					0.06666861583380523
GVVKKMMKFLK	11	Unmodified	_GVVKKMMKFLK_					0	0	0		ENSG00000149292|ENST00000529221|TTC12;nc|ENSG00000149292|Q9H892-2|TTC12	ENSG00000149292|ENST00000529221|TTC12	ENSG00000149292|ENST00000529221|TTC12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.933837890625	3	436.934662	1307.78216	0.49799	0.00021759	-2.0886	-0.00091257	-1.5906	-0.00069498	436.93369927878706	20.732	2.5953	20.273	19.595	22.19	-0.4591					152	59	4	0	0	0	0.74022	2	696	696;760		24.232	2.5408	1	492360			13576	5014	9329	9338	15642;15643	15642					0.14057563060578104
GVVKRPIV	8	Unmodified	_GVVKRPIV_					0	0	0			REV__nc|ENSG00000133313|Q96KP4-2|CNDP2	REV__nc|ENSG00000133313|Q96KP4-2|CNDP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.292236328125	2	434.292362	866.570172	-1.3365	-0.00058044	1.4956	0.00064951	0.15904	6.9069E-05	434.2928799544304	74.19	1.0466	74.276	73.895	74.942	0.085907					77	42	2	0	0	0	0.86288	1	6817	6817		26.796	6.3143	1	1072300	+		13577	19071	9330	9339	15644	15644					0.13154975756310705
GVVLCRLL	8	Unmodified	_GVVLCRLL_					0	0	0		nc|ENSG00000102606|Q14155-5|ARHGEF7;nc|ENSG00000102606|Q14155-2|ARHGEF7;nc|ENSG00000102606|Q14155-3|ARHGEF7;nc|ENSG00000102606|Q14155|ARHGEF7;ENSG00000102606|ENST00000646102|ARHGEF7;ENST00000422836.2_1_13:111767873-111768762:+|nuORF	nc|ENSG00000102606|Q14155-5|ARHGEF7	nc|ENSG00000102606|Q14155-5|ARHGEF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7721252441406	2	436.772948	871.531344	0.068775	3.0039E-05	1.8603	0.00081255	1.9291	0.00084258	436.77361932227035	26.594	0.6912	26.703	26.441	27.132	0.10901					65	32	3	0	0	0	0.82419	1	1040	1040		13.775	0	1	226120			13578	2012	9331	9340	15645	15645					0.0904392713028983
GVVLVVVK	8	Unmodified	_GVVLVVVK_					0	0	0		nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6;ENST00000489483.5_1_3:48668913-48669282:-|nuORF	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7850646972656	2	406.783839	811.553125	0.20394	8.2959E-05	3.6434	0.0014821	3.8473	0.001565	406.7851787446003	29.647	1.7935	29.678	29.075	30.869	0.030947					149	52	4	0	0	0	0.82464	1	1535	1535		21.702	0	1	789640			13579	8709	9332	9341	15646	15646					0.13981055150509292
GVVLVVVK	8	Unmodified	_GVVLVVVK_					0	0	0		nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6;ENST00000489483.5_1_3:48668913-48669282:-|nuORF	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852478027344	2	406.783839	811.553125	-0.12701	-5.1665E-05	4.0102	0.0016313	3.8832	0.0015796	406.7853480704683	34.439	1.4356	34.434	33.818	35.254	-0.0047417					125	35	4	0	0	0	0.86791	1	2030	2030		28.254	1.4582	1	1552500			13580	8709	9332	9341	15647	15647					0.13981055150509292
GVVLVVVK	8	Unmodified	_GVVLVVVK_					0	0	0		nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6;ENST00000489483.5_1_3:48668913-48669282:-|nuORF	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853698730469	2	406.783839	811.553125	-0.34246	-0.00013931	4.1924	0.0017054	3.85	0.0015661	406.78540084150717	29.66	1.7951	29.616	28.901	30.696	-0.043095					140	52	4	0	0	0	0.82464	1	1638	1638		21.702	0	1	985720			13581	8709	9332	9341	15648	15648					0.13981055150509292
GVVLVVVK	8	Unmodified	_GVVLVVVK_					0	0	0		nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6;ENST00000489483.5_1_3:48668913-48669282:-|nuORF	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7847900390625	2	406.783839	811.553125	0.30634	0.00012461	3.4308	0.0013956	3.7371	0.0015202	406.7851080123586	29.615	1.556	29.525	28.974	30.53	-0.089546					92	35	4	0	0	0	0.81548	1	1961	1961		20.482	1.1219	1	1963500			13582	8709	9332	9341	15649	15649					0.13981055150509292
GVVLVVVK	8	Unmodified	_GVVLVVVK_					0	0	0		nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6;ENST00000489483.5_1_3:48668913-48669282:-|nuORF	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7845458984375	2	406.783839	811.553125	0.94675	0.00038512	2.7522	0.0011195	3.699	0.0015047	406.78484451151587	33.529	1.369	33.798	33.413	34.781	0.26929					111	32	4	0	0	0	0.81548	1	2549	2549		20.482	4.8456	1	7385300			13583	8709	9332	9341	15650	15650					0.13981055150509292
GVVLVVVK	8	Unmodified	_GVVLVVVK_					0	0	0		nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6;ENST00000489483.5_1_3:48668913-48669282:-|nuORF	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7845458984375	2	406.783839	811.553125	1.2005	0.00048834	3.185	0.0012956	4.3855	0.001784	406.785005048599	34.87	2.3679	35.251	34.852	37.22	0.3812					132	59	3	0	0	0	0.81724	1	2596	2596		14.664	0	1	1200600			13584	8709	9332	9341	15651	15651					0.13981055150509292
GVVSATEH	8	Unmodified	_GVVSATEH_					0	0	0			REV__ENST00000481734.1_1_3:39174545-39175936:+|nuORF	REV__ENST00000481734.1_1_3:39174545-39175936:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	400.1966857910156	2	400.200867	798.387182	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.431	1	86.431	85.931	86.931	0								0	0	0	0.29831	1	8235	8235		39.021	1.993	1		+		13585	27448	9333	9342	15652	15652					-0.020076230961535657
GVVSATEH	8	Unmodified	_GVVSATEH_					0	0	0			REV__ENST00000481734.1_1_3:39174545-39175936:+|nuORF	REV__ENST00000481734.1_1_3:39174545-39175936:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.197021484375	2	400.200867	798.387182	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.77	1	85.956	85.456	86.456	0.18523								0	0	0	0.29831	1	8399	8399		39.021	3.8208	1		+		13586	27448	9333	9342	15653	15653					-0.020076230961535657
GVVTLIELL	9	Unmodified	_GVVTLIELL_					0	0	0			REV__nc|ENSG00000141161|Q8IWX7-2|UNC45B	REV__nc|ENSG00000141161|Q8IWX7-2|UNC45B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3095397949219	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.72402	1	2380	2380		38.806	5.2906	1	336090	+		13587	19664	9334	9343	15654	15654					0.11580985768216578
GVVTLMLF	8	Unmodified	_GVVTLMLF_					0	0	0			REV__ENST00000418923.2_1_13:103054626-103054758:-|nuORF	REV__ENST00000418923.2_1_13:103054626-103054758:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2552795410156	2	440.254057	878.493561	-1.1281	-0.00049663	4.1962	0.0018474	3.0681	0.0013507	440.2557479543984	62.714	1.4312	63.102	62.273	63.704	0.3878					74	32	3	0	0	0	0.81548	1	6705	6705		20.482	1.1219	1	707290	+		13588	26467	9335	9344	15655	15655					0.04945416144835235
GVVVESIQV	9	Unmodified	_GVVVESIQV_					0	0	0		nc|ENSG00000129003|Q709C8-2|VPS13C;ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2690124511719	2	465.26875	928.522947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.869	1	80.869	80.369	81.369	0								0	0	0	0.30416	1	7480	7480		29.15	1.2673	1				13589	3570	9336	9345	15656	15656					0.05582651694658125
GVWGWSAAR	9	Unmodified	_GVWGWSAAR_					0	0	0		ENST00000505807.6_1_12:130640256-130646693:-|nuORF	ENST00000505807.6_1_12:130640256-130646693:-|nuORF	ENST00000505807.6_1_12:130640256-130646693:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25079345703125	2	495.251226	988.487899	-1.2281	-0.0006082	-0.46416	-0.00022988	-1.6922	-0.00083808	495.2508047211451	62.746	0.9958	63.134	62.752	63.747	0.3878					48	22	3	0	0	0	0.76255	1	6731	6731		35.618	4.0885	1	311810			13590	12931	9337	9346	15657	15657					-0.0068054632263283565
GVWLTVIGGSA	11	Unmodified	_GVWLTVIGGSA_					0	0	0		ENSG00000139679|ENST00000620633|LPAR6	ENSG00000139679|ENST00000620633|LPAR6	ENSG00000139679|ENST00000620633|LPAR6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2933349609375	2	530.295299	1058.57605	-0.73575	-0.00039016	-2.8196	-0.0014952	-3.5553	-0.0018854	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.64498	1	8883	8883		39.253	5.0803	1	1390700			13591	4389	9338	9347	15658	15658					0.049100294773325004
GVYVGVAVALI	11	Unmodified	_GVYVGVAVALI_					0	0	0		ENSG00000101463|ENST00000376862|SYNDIG1	ENSG00000101463|ENST00000376862|SYNDIG1	ENSG00000101463|ENST00000376862|SYNDIG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8199462890625	2	530.823692	1059.63283	-1.2397	-0.00065807	-4.086	-0.002169	-5.3257	-0.002827	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.69735	1	7644	7644		31.955	2.8053	1	869100			13592	1944	9339	9348	15659	15659					0.10540077033851958
GWAARSVP	8	Unmodified	_GWAARSVP_					0	0	0			REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.22735595703125	2	422.22722	842.439886	-1.6383	-0.00069172	3.0629	0.0012932	1.4246	0.00060153	422.22843886781163	56.746	0.50715	56.746	56.45	56.957	0					41	24	2	0	0	0	0.87276	2	4865	4859;4865		37.028	8.7742	1	414110	+		13593	24292	9340	9349	15660;15661	15661					0.012363797573243573
GWAARSVP	8	Unmodified	_GWAARSVP_					0	0	0			REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.22808837890625	2	422.22722	842.439886	-1.6279	-0.00068734	3.5948	0.0015178	1.9669	0.00083048	422.2286431542634	57.254	2.0219	57.254	56.929	58.951	0					133	84	2	0	0	0	0.87276	1	4939	4939		29.842	4.3914	1	766060	+		13594	24292	9340	9349	15662	15662					0.012363797573243573
GWAARSVP	8	Unmodified	_GWAARSVP_					0	0	0			REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.227783203125	2	422.22722	842.439886	1.4046	0.00059308	0.57845	0.00024424	1.9831	0.00083732	422.2272983859282	64.331	2.0044	64.358	63.19	65.195	0.027138					107	65	3	0	0	0	0.87276	1	6057	6057		29.842	1.5873	1	528250	+		13595	24292	9340	9349	15663	15663					0.012363797573243573
GWAARSVP	8	Unmodified	_GWAARSVP_					0	0	0			REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2279357910156	2	422.22722	842.439886	-1.7987	-0.00075945	3.6985	0.0015616	1.8999	0.00080217	422.2287015198112	64.24	0.93478	64.36	64.014	64.949	0.12005					82	33	3	0	0	0	0.83466	1	5661	5661		23.037	1.3344	1	614800	+		13596	24292	9340	9349	15664	15664					0.012363797573243573
GWAARSVP	8	Unmodified	_GWAARSVP_					0	0	0			REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.22705078125	2	422.22722	842.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.086	1	61.186	60.686	61.686	0.10082								0	0	0	0.29831	1	5313	5313		39.021	0.21535	1		+		13597	24292	9340	9349	15665	15665					0.012363797573243573
GWAARSVP	8	Unmodified	_GWAARSVP_					0	0	0			REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2276916503906	2	422.22722	842.439886	0.38075	0.00016076	0.76925	0.0003248	1.15	0.00048556	422.22752903910396	61.401	1.1417	61.52	61.387	62.529	0.11901					70	54	2	0	0	0	0.9159	1	5377	5377		44.531	3.9584	1	712460	+		13598	24292	9340	9349	15666	15666					0.012363797573243573
GWAARSVP	8	Unmodified	_GWAARSVP_					0	0	0			REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2277526855469	2	422.22722	842.439886	-0.783	-0.0003306	2.5751	0.0010873	1.7922	0.0007567	422.2282038382867	57.222	1.4902	57.202	56.824	58.314	-0.01947					144	72	3	0	0	0	0.87276	1	4846	4846		29.842	0.69198	1	642490	+		13599	24292	9340	9349	15667	15667					0.012363797573243573
GWAARSVP	8	Unmodified	_GWAARSVP_					0	0	0			REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2264099121094	2	422.22722	842.439886	-0.93887	-0.00039642	2.144	0.00090525	1.2051	0.00050883	422.2280284167546	61.398	1.0667	61.414	61.239	62.306	0.015724					73	47	2	0	0	0	0.86791	1	5354	5354		28.254	6.2944	1	807210	+		13600	24292	9340	9349	15668	15668					0.012363797573243573
GWAARSVP	8	Unmodified	_GWAARSVP_					0	0	0			REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	REV__ENST00000252485.8_1_19:45381953-45382088:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2277526855469	2	422.22722	842.439886	0.73615	0.00031082	1.0409	0.00043948	1.777	0.0007503	422.22756865248357	54.832	1.4557	55.239	54.948	56.404	0.40663					59	34	3	0	0	0	0.90024	1	5585	5585		39.021	7.0666	1	872870	+		13601	24292	9340	9349	15669	15669					0.012363797573243573
GWAARVPS	8	Unmodified	_GWAARVPS_					0	0	0			REV__ENST00000476464.5_1_3:64008693-64008870:-|nuORF	REV__ENST00000476464.5_1_3:64008693-64008870:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.592529296875	2	422.22722	842.439886	-0.13012	-5.494E-05	3.1189	0.0013169	2.9888	0.001262	422.22844970420624	54.451	0.68489	54.443	54.168	54.853	-0.0077095					46	25	2	0	0	0	0.4196	1	4846	4846		37.028	15.326	1	261170	+		13602	27332	9341	9350	15670	15670					0.012363797573243573
GWAGKKKEENK	11	Unmodified	_GWAGKKKEENK_					0	0	0		chr14:19307111-19331835|51|39.51|0.99|5.32|-|2|DUXAP10,DUXAP10|1;chr14:19068214-19092916|51|37.92|0.93|5.35|+|2|DUXAP9,DUXAP9|1	chr14:19307111-19331835|51|39.51|0.99|5.32|-|2|DUXAP10,DUXAP10|1	chr14:19307111-19331835|51|39.51|0.99|5.32|-|2|DUXAP10,DUXAP10|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	637.8447265625	2	637.846219	1273.67788	0.42263	0.00026957	-1.4389	-0.00091778	-1.0162	-0.0006482	637.8452388757121	43.672	1.1051	43.729	43.397	44.503	0.056744					60	26	3	0	0	0	0.085268	1	3025	3025		95.815	13.065	1	2414200			13603	160	9342	9351	15671	15671					0.05199275829090766
GWALVMIYY	9	Unmodified	_GWALVMIYY_					0	0	0			REV__nc|ENSG00000130821|P48029-4|SLC6A8	REV__nc|ENSG00000130821|P48029-4|SLC6A8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.2838134765625	2	558.283346	1114.55214	-1.0256	-0.0005726	3.4327	0.0019164	2.4071	0.0013438	558.2848413699397	75.44	0.58796	75.486	75.204	75.792	0.045959					38	17	3	0	0	0	0.55559	1	7271	7271		49.211	3.2588	1	79645	+		13604	18913	9343	9352	15672	15672					-0.0005552728071052115
GWALVVKR	8	Unmodified	_GWALVVKR_					0	0	0			REV__nc|ENSG00000146842|Q96SK2-4|TMEM209	REV__nc|ENSG00000146842|Q96SK2-4|TMEM209	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7908630371094	2	464.789987	927.565421	-1.1101	-0.00051598	2.5453	0.001183	1.4351	0.00066703	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.81548	1	2121	2121		20.482	2.1574	1	415400	+		13605	20036	9344	9353	15673	15673					0.09874091613551172
GWARGTVP	8	Unmodified	_GWARGTVP_					0	0	0			REV__ENST00000380243.8_2_14:99980768-99980945:-|nuORF	REV__ENST00000380243.8_2_14:99980768-99980945:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.7294616699219	2	422.22722	842.439886	-0.34254	-0.00014463	2.2098	0.00093305	1.8673	0.00078842	422.22799339483345	56.643	0.55728	56.614	56.308	56.865	-0.02866					41	25	2	0	0	0	0.81548	1	5179	5179		20.482	2.1574	1	776510	+		13606	25944	9345	9354	15674	15674					0.01236379757335726
GWARGTVP	8	Unmodified	_GWARGTVP_					0	0	0			REV__ENST00000380243.8_2_14:99980768-99980945:-|nuORF	REV__ENST00000380243.8_2_14:99980768-99980945:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.22857666015625	2	422.22722	842.439886	0.33102	0.00013977	1.457	0.00061517	1.788	0.00075494	422.227740126127	56.228	1.0937	56.328	55.393	56.487	0.09919					79	43	2	0	0	0	0.82464	1	4751	4751		21.702	1.2205	1	846200	+		13607	25944	9345	9354	15675	15675					0.01236379757335726
GWARLPSG	8	Unmodified	_GWARLPSG_					0	0	0			REV__ENST00000545320.1_1_11:60739240-60755419:+|nuORF	REV__ENST00000545320.1_1_11:60739240-60755419:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2276306152344	2	422.22722	842.439886	-1.0391	-0.00043872	2.9759	0.0012565	1.9369	0.0008178	422.2283416890696	64.395	1.1539	64.425	64.021	65.175	0.030243					96	39	3	0	0	0	0.86288	1	5697	5697		26.796	6.3143	1	492400	+		13608	28521	9346	9355	15676	15676					0.01236379757335726
GWCGLPRK	8	Carbamidomethyl (C)	_GWC(Carbamidomethyl (C))GLPRK_	GWC(1)GLPRK		GWC(60)GLPRK		0	1	0			REV__ENST00000225388.8_1_17:27590872-27591025:-|nuORF	REV__ENST00000225388.8_1_17:27590872-27591025:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.25335693359375	2	487.255454	972.496355	-0.86944	-0.00042364	-2.4783	-0.0012076	-3.3478	-0.0016312	487.2540607958479	28.748	0.80415	28.719	28.366	29.171	-0.029207					53	18	4	0	0	0	0.84634	1	1771	1771		60.294	14.342	1	1269000	+		13609	24175	9347	9356	15677	15677	296				0.009006843223460237
GWCVAPRY	8	Unmodified	_GWCVAPRY_					0	0	0			REV__ENST00000521330.6_1_17:78397332-78402276:+|nuORF	REV__ENST00000521330.6_1_17:78397332-78402276:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.2304992675781	2	476.228905	950.443257	-0.98823	-0.00047062	3.9349	0.0018739	2.9466	0.0014033	476.2306460268229	25.104	0.58154	25.167	24.921	25.503	0.063122					52	26	3	0	0	0	0.86791	1	914	914		28.254	1.4582	1	136020	+		13610	28116	9348	9357	15678	15678					-0.033946934603250156
GWFGKVLL	8	Unmodified	_GWFGKVLL_					0	0	0		ENSG00000164715|ENST00000297293|LMTK2	ENSG00000164715|ENST00000297293|LMTK2	ENSG00000164715|ENST00000297293|LMTK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.2739562988281	2	460.273638	918.532724	-0.43199	-0.00019884	1.3881	0.00063892	0.95614	0.00044009	460.2734383493033	51.229	1.2916	51.664	50.954	52.245	0.43505					56	30	3	0	0	0	0.4196	1	5136	5136		14.664	0	1	401940			13611	5994	9349	9358	15679	15679					0.07019884490705408
GWFGKVLL	8	Unmodified	_GWFGKVLL_					0	0	0		ENSG00000164715|ENST00000297293|LMTK2	ENSG00000164715|ENST00000297293|LMTK2	ENSG00000164715|ENST00000297293|LMTK2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	460.273638	918.532724	0.71689	0.00032997	-0.021094	-9.7091E-06	0.6958	0.00032026	460.2729244149802	51.119	1.318	51.871	51.12	52.438	0.75174	0.10341	-0.00059393	NaN	8.8223	59	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	659430			13612	5994	9349	9358							0.07019884490705408
GWGGEKCVLL	10	Unmodified	_GWGGEKCVLL_					0	0	0		ENST00000543873.6_1_12:57503871-57504054:-|nuORF	ENST00000543873.6_1_12:57503871-57504054:-|nuORF	ENST00000543873.6_1_12:57503871-57504054:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2727661132812	2	531.276052	1060.53755	0.79519	0.00042247	1.1817	0.0006278	1.9769	0.0010503	531.2767904955772	50.18	0.65897	50.627	50.307	50.966	0.44761					32	15	3	0	0	0	0.35939	1	4916	4916		67.494	1.0644	1	1045700			13613	13563	9350	9359	15680	15680					0.00970400571168284
GWGRGGVI	8	Unmodified	_GWGRGGVI_					0	0	0		ENST00000405995.5_1_9:134371905-134372049:+|nuORF	ENST00000405995.5_1_9:134371905-134372049:+|nuORF	ENST00000405995.5_1_9:134371905-134372049:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2127685546875	2	401.221937	800.429321	0.39781	0.00015961	0.52814	0.0002119	0.92596	0.00037151	401.22216830170197	39.108	0.42896	39.45	39.232	39.661	0.34187					14	9	2	0	0	0	0.4196	1	3281	3281		21.702	7.0382	1	64689			13614	11267	9351	9360	15681	15681					0.02112397102905561
GWGVGLEHSF	10	Unmodified	_GWGVGLEHSF_					0	0	0			REV__ENST00000307630.4_1_7:75958795-75958864:-|nuORF	REV__ENST00000307630.4_1_7:75958795-75958864:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.2670288085938	2	544.761623	1087.50869	-1.6839	-0.00091731	-1.7873	-0.00097364	-3.4711	-0.0018909	544.7604414706941	20.63	0.56047	20.63	20.424	20.985	0					56	26	3	0	0	0	0.86452	1	495	495		30.504	4.9296	1	129540	+		13615	24847	9352	9361	15682	15682					-0.03156000733633846
GWGWGWQGEP	10	Unmodified	_GWGWGWQGEP_					0	0	0		ENST00000497544.2_2_11:1775127-1776230:-|nuORF	ENST00000497544.2_2_11:1775127-1776230:-|nuORF	ENST00000497544.2_2_11:1775127-1776230:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8670043945312	2	580.251423	1158.48829	-0.72216	-0.00041903	3.0972	0.0017972	2.3751	0.0013781	580.7545730526891	78.462	0.63195	79.025	78.742	79.374	0.56332					30	14	3	0	0	0	0.37624	1	8994	8994		47.657	19.775	1	140770			13616	12809	9353	9362	15683	15683					-0.08461171393423683
GWHNFKTKG	9	Unmodified	_GWHNFKTKG_					0	0	0		chr18:24694999-24705644|34|49.32|0.0|22.23|+|2|LINC01915,LINC01915|1	chr18:24694999-24705644|34|49.32|0.0|22.23|+|2|LINC01915,LINC01915|1	chr18:24694999-24705644|34|49.32|0.0|22.23|+|2|LINC01915,LINC01915|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	537.7789306640625	2	537.777608	1073.54066	0.070609	3.7972E-05	0.62309	0.00033508	0.6937	0.00037306	537.7777783354844	43.95	0.88203	43.891	43.6	44.482	-0.058262					36	21	2	0	0	0	0.76255	1	3092	3092		35.618	0	1	173410			13617	249	9354	9363	15684	15684					0.006834117401922413
GWHSMVAF	8	Unmodified	_GWHSMVAF_					0	0	0		ENSG00000064687|ENST00000263094|ABCA7;nc|ENSG00000064687|Q8IZY2-2|ABCA7	ENSG00000064687|ENST00000263094|ABCA7	ENSG00000064687|ENST00000263094|ABCA7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2327575683594	2	467.71563	933.416708	-0.39655	-0.00018547	-0.025057	-1.1719E-05	-0.4216	-0.00019719	467.7154788836338	69.87	0.71318	70.254	70.036	70.75	0.38416					27	18	2	0	0	0	0.4196	1	7779	7779		9.4706	0.64823	1	256400			13618	1108	9355	9364	15685	15685					-0.052663823516468256
GWILLAVMLGY	11	Unmodified	_GWILLAVMLGY_					0	0	0			REV__ENSG00000181074|ENST00000641350|OR52N4	REV__ENSG00000181074|ENST00000641350|OR52N4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.3460083007812	2	618.346477	1234.6784	0.55169	0.00034113	-1.48	-0.00091518	-0.92836	-0.00057405	618.3454418699644	97.724	3.0702	97.772	96.827	99.897	0.048157					199	71	4	0	0	0	0.69735	1	10391	10391		31.955	0.42505	1	831610	+		13619	22440	9356	9365	15686	15686					0.07044979224565395
GWKIVAVR	8	Unmodified	_GWKIVAVR_					0	0	0			REV__ENSG00000213625|ENST00000371065|LEPROT	REV__ENSG00000213625|ENST00000371065|LEPROT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7907409667969	2	464.789987	927.565421	0.19154	8.9025E-05	1.2584	0.00058488	1.4499	0.0006739	464.7904622046614	36.811	0.86831	36.91	36.514	37.382	0.099277					56	23	3	0	0	0	0.80706	1	2062	2062		19.36	1.995	1	232950	+		13620	23624	9357	9366	15687	15687					0.09874091613551172
GWLFRRVRFEK	11	Unmodified	_GWLFRRVRFEK_					0	0	0		nc|ENSG00000177990|Q6NUT2-2|DPY19L2;ENST00000413230.6_1_12:63954294-63977630:-|nuORF;ENSG00000177990|ENST00000324472|DPY19L2	nc|ENSG00000177990|Q6NUT2-2|DPY19L2	nc|ENSG00000177990|Q6NUT2-2|DPY19L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.6221923828125	3	498.621122	1492.84154	-0.24645	-0.00012288	4.2054	0.0020969	3.9589	0.001974	498.62308144457916	21.663	1.0696	21.599	21.115	22.184	-0.064743					82	38	3	0	0	0	0.80593	1	628	628		10.104	0.45776	1	61443			13621	7172	9358	9367	15688	15688					0.11482918390629493
GWLLGALPR	9	Unmodified	_GWLLGALPR_					0	0	0		ENST00000270861.9_1_4:128802164-128803079:+|nuORF;ENST00000513090.5_1_4:128802191-128804636:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.795654296875	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.7932	1	3491	3491		23.042	3.6825	1	2891800			13622	9559	9359	9368	15689	15689					0.08446074267988024
GWLLGALPR	9	Unmodified	_GWLLGALPR_					0	0	0		ENST00000270861.9_1_4:128802164-128803079:+|nuORF;ENST00000513090.5_1_4:128802191-128804636:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.2989196777344	2	491.795269	981.575986	-1.4502	-0.0007132	2.5925	0.001275	1.1423	0.00056177	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.78058	2	4676	4676;4774		30.504	5.0535	1	1043600			13623	9559	9359	9368	15690;15691	15690					0.08446074267988024
GWLLGALPR	9	Unmodified	_GWLLGALPR_					0	0	0		ENST00000270861.9_1_4:128802164-128803079:+|nuORF;ENST00000513090.5_1_4:128802191-128804636:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7947692871094	2	491.795269	981.575986	0.21767	0.00010705	0.41627	0.00020472	0.63394	0.00031177	491.79537288056144	45.526	1.3498	45.507	44.705	46.055	-0.018581					75	31	3	0	0	0	0.7932	1	3540	3540		24.203	3.7209	1	529090			13624	9559	9359	9368	15692	15692					0.08446074267988024
GWLLGALPR	9	Unmodified	_GWLLGALPR_					0	0	0		ENST00000270861.9_1_4:128802164-128803079:+|nuORF;ENST00000513090.5_1_4:128802191-128804636:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7955322265625	2	491.795269	981.575986	-0.72034	-0.00035426	1.4985	0.00073695	0.77816	0.00038269	491.7958614454625	45.142	1.3703	45.154	44.592	45.963	0.012058					80	34	3	0	0	0	0.7932	1	3257	3257		24.203	2.2429	1	396090			13625	9559	9359	9368	15693	15693					0.08446074267988024
GWLLGALPR	9	Unmodified	_GWLLGALPR_					0	0	0		ENST00000270861.9_1_4:128802164-128803079:+|nuORF;ENST00000513090.5_1_4:128802191-128804636:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.795654296875	2	491.795269	981.575986	-0.71044	-0.00034939	1.6504	0.00081164	0.93993	0.00046225	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.7932	1	4097	4097		18.324	0.95945	1	571510			13626	9559	9359	9368	15694	15694					0.08446074267988024
GWLLGALPR	9	Unmodified	_GWLLGALPR_					0	0	0		ENST00000270861.9_1_4:128802164-128803079:+|nuORF;ENST00000513090.5_1_4:128802191-128804636:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7960205078125	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.77546	1	4033	4033		31.955	2.8053	1	581270			13627	9559	9359	9368	15695	15695					0.08446074267988024
GWLLGALPR	9	Unmodified	_GWLLGALPR_					0	0	0		ENST00000270861.9_1_4:128802164-128803079:+|nuORF;ENST00000513090.5_1_4:128802191-128804636:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79522705078125	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.7932	1	4230	4230		25.45	1.2474	1	748320			13628	9559	9359	9368	15696	15696					0.08446074267988024
GWLLGALPR	9	Unmodified	_GWLLGALPR_					0	0	0		ENST00000270861.9_1_4:128802164-128803079:+|nuORF;ENST00000513090.5_1_4:128802191-128804636:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7953796386719	2	491.795269	981.575986	-0.12437	-6.1163E-05	0.93789	0.00046125	0.81352	0.00040009	491.7955803973609	45.417	1.3583	45.348	44.556	45.914	-0.06863					81	33	3	0	0	0	0.7932	1	3282	3282		24.203	3.7209	1	439300			13629	9559	9359	9368	15697	15697					0.08446074267988024
GWLLGALPR	9	Unmodified	_GWLLGALPR_					0	0	0		ENST00000270861.9_1_4:128802164-128803079:+|nuORF;ENST00000513090.5_1_4:128802191-128804636:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79498291015625	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.7932	1	3936	3936		24.203	5.8783	1	1502200			13630	9559	9359	9368	15698	15698					0.08446074267988024
GWLLGALPR	9	Unmodified	_GWLLGALPR_					0	0	0		ENST00000270861.9_1_4:128802164-128803079:+|nuORF;ENST00000513090.5_1_4:128802191-128804636:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	ENST00000270861.9_1_4:128802164-128803079:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7972717285156	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.157	1	56.12	55.62	56.62	-0.036827								0	0	0	0.27974	1	4739	4739		38.806	8.3025	1				13631	9559	9359	9368	15699	15699					0.08446074267988024
GWLLKAVS	8	Unmodified	_GWLLKAVS_					0	0	0		ENSG00000168758|ENST00000305476|SEMA4C	ENSG00000168758|ENST00000305476|SEMA4C	ENSG00000168758|ENST00000305476|SEMA4C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2645263671875	2	437.263271	872.511988	1.7622	0.00077054	3.9045	0.0017073	5.6667	0.0024778	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.84341	1	1021	1021		24.203	3.2558	1	1079000			13632	6431	9360	9369	15700	15700					0.07063294111037521
GWLLPGRRPR	10	Unmodified	_GWLLPGRRPR_					0	0	0		ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;ENST00000591097.5_1_19:1271671-1272439:+|nuORF;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3674926757812	2	604.362173	1206.70979	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.84	1	114.82	114.32	115.32	-0.02433								0	0	0	0.45132	1	12728	12728		17.365	0	1				13633	1763	9361	9370	15701	15701					0.11470733093551644
GWLTPIVPTLW	11	Unmodified	_GWLTPIVPTLW_					0	0	0			REV__ENST00000344862.9_1_12:44119226-44119532:-|nuORF	REV__ENST00000344862.9_1_12:44119226-44119532:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.3617553710938	2	641.863349	1281.71214	-1.1528	-0.00073992	-4.4261	-0.002841	-5.5789	-0.0035809	642.3621630712736	113.32	3.0307	113.27	113.24	116.27	-0.044777					170	68	3	0	0	0	0.72918	1	12281	12281		26.693	1.1189	1	3139500	+		13634	25309	9362	9371	15702	15702					0.08255723988008867
GWLWRPRGL	9	Unmodified	_GWLWRPRGL_					0	0	0		ENST00000221801.7_1_19:40331378-40337010:-|nuORF	ENST00000221801.7_1_19:40331378-40337010:-|nuORF	ENST00000221801.7_1_19:40331378-40337010:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.8240356445312	2	570.824892	1139.63523	0.16054	9.164E-05	-1.0508	-0.00059982	-0.89026	-0.00050818	570.8240970044897	61.664	0.90487	61.631	61.356	62.261	-0.033173					76	36	3	0	0	0	0.77546	1	5830	5830		31.955	1.386	1	637440			13635	9173	9363	9372	15703	15703					0.07099970282183676
GWPLPLLRLL	10	Unmodified	_GWPLPLLRLL_					0	0	0		ENST00000414035.5_1_7:100875905-100880680:-|nuORF;ENST00000308344.9_1_7:100875905-100880710:-|nuORF	ENST00000414035.5_1_7:100875905-100880680:-|nuORF	ENST00000414035.5_1_7:100875905-100880680:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.78125	2	589.376426	1176.7383	-1.1382	-0.00067086	1.3037	0.00076837	0.16545	9.7515E-05	589.3770246042933	44.295	0.76463	45.14	44.82	45.585	0.84438					34	18	2	0	0	0	0.37624	1	4118	4118		11.511	0	1	403100			13636	9887	9364	9373	15704	15704					0.15700037950136903
GWPNLRRLKGL	11	Unmodified	_GWPNLRRLKGL_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031360	REV__CON__ENSEMBL:ENSBTAP00000031360	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2679443359375	3	437.266568	1308.77787	-0.49223	-0.00021524	3.5152	0.0015371	3.023	0.0013218	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.74022	1	4032	4032		24.232	2.4514	1	3262400	+	+	13637	15966	9365	9374	15705	15705					0.13583557953529635
GWPNLRRLKGL	11	Unmodified	_GWPNLRRLKGL_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031360	REV__CON__ENSEMBL:ENSBTAP00000031360	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26739501953125	3	437.266568	1308.77787	1.1666	0.00051013	1.5125	0.00066137	2.6791	0.0011715	437.26715109542596	51.001	1.6388	51.753	50.881	52.52	0.75174					116	39	4	0	0	0	0.70584	1	5073	5073		30.569	2.9249	1	3280800	+	+	13638	15966	9365	9374	15706	15706					0.13583557953529635
GWPSRGAL	8	Unmodified	_GWPSRGAL_					0	0	0			REV__ENST00000556433.5_1_14:69445007-69445439:-|nuORF	REV__ENST00000556433.5_1_14:69445007-69445439:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2274475097656	2	422.22722	842.439886	0.34219	0.00014448	1.4561	0.00061482	1.7983	0.0007593	422.22773189894326	57.189	1.8785	57.295	56.929	58.807	0.1055					192	88	3	0	0	0	0.86791	1	4836	4836		28.254	0	1	718200	+		13639	28699	9366	9375	15707	15707					0.012363797573243573
GWRDIEPEP	9	Unmodified	_GWRDIEPEP_					0	0	0		ENST00000495881.1_1_1:156255017-156255866:+|nuORF;ENSG00000163472|ENST00000405535|TMEM79	ENST00000495881.1_1_1:156255017-156255866:+|nuORF	ENST00000495881.1_1_1:156255017-156255866:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.7333374023438	2	549.764363	1097.51417	-0.41159	-0.00022628	0.95171	0.00052322	0.54013	0.00029694	549.764425059635	25.482	0.38489	25.225	24.998	25.383	-0.2572					10	8	2	0	0	0	0.20789	1	1333	1333		39.253	0	1	33646			13640	5802	9367	9376	15708	15708					-0.030683219418278895
GWRKKRGPPKV	11	Unmodified	_GWRKKRGPPKV_					0	0	0			REV__ENSG00000197651|ENST00000358859|CCER1	REV__ENSG00000197651|ENST00000358859|CCER1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.9400939941406	3	436.938562	1307.79386	1.2427	0.00054299	1.3275	0.00058005	2.5703	0.001123	436.9390015295864	46.658	1.2437	46.654	46.284	47.528	-0.0041618					96	31	4	0	0	0	0.71803	1	3869	3869		28.577	0	1	651950	+		13641	23256	9368	9377	15709	15709					0.1522726419045739
GWRLHGLE	8	Unmodified	_GWRLHGLE_					0	0	0			REV__ENST00000532086.1_1_16:3115629-3115743:+|nuORF	REV__ENST00000532086.1_1_16:3115629-3115743:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.25872802734375	2	484.259051	966.503549	-1.1467	-0.0005553	-0.073318	-3.5505E-05	-1.22	-0.00059081	484.25888424443	26.462	0.55018	26.43	26.147	26.697	-0.032127					26	11	3	0	0	0	0.884	1	1139	1139		33.516	0	1	62652	+		13642	28182	9369	9378	15710	15710					0.0189574019441352
GWRLKRGPRSV	11	Unmodified	_GWRLKRGPRSV_					0	0	0		ENST00000394921.8_1_7:75157117-75157315:-|nuORF	ENST00000394921.8_1_7:75157117-75157315:-|nuORF	ENST00000394921.8_1_7:75157117-75157315:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26324462890625	3	437.930067	1310.76837	-1.5734	-0.00068902	-2.5761	-0.0011282	-4.1495	-0.0018172	438.2635889617756	44.765	0.5195	44.777	44.509	45.028	0.012058					18	11	2	0	0	0	0.1767	1	3148	3148		13.508	0.55046	1	105070			13643	11081	9370	9379	15711	15711					0.12541789668034653
GWRLSRLPRL	10	Unmodified	_GWRLSRLPRL_					0	0	0			REV__ENSG00000175591|ENST00000393597|P2RY2	REV__ENSG00000175591|ENST00000393597|P2RY2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3865966796875	2	627.383106	1252.75166	-1.2001	-0.00075293	0.29419	0.00018457	-0.90592	-0.00056836	627.3828501207851	113.14	0.31107	113.11	112.91	113.22	-0.032326					24	9	4	0	0	0	0.37624	1	12054	12054		10.265	0	1	9714000	+		13644	22075	9371	9380	15712	15712					0.1353928878206716
GWRLSRLPRL	10	Unmodified	_GWRLSRLPRL_					0	0	0			REV__ENSG00000175591|ENST00000393597|P2RY2	REV__ENSG00000175591|ENST00000393597|P2RY2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	627.383106	1252.75166	2.3052	0.0014462	-2.9983	-0.0018811	-0.69316	-0.00043488	627.3808397475035	112.95	0.60682	112.98	112.6	113.21	0.030602	0.0070942	-0.00011143	NaN	10.265	79	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1312300	+		13645	22075	9371	9380							0.1353928878206716
GWRMRVAL	8	Unmodified	_GWRMRVAL_					0	0	0		nc|ENSG00000285292|Q9UG63-2|ABCF2;ENSG00000033050|ENST00000287844|ABCF2	nc|ENSG00000285292|Q9UG63-2|ABCF2	nc|ENSG00000285292|Q9UG63-2|ABCF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7801818847656	2	494.779096	987.54364	-1.0037	-0.00049663	3.1985	0.0015826	2.1948	0.0010859	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.86791	1	8427	8427		28.254	0.37203	1	265620			13646	889	9372	9381	15713	15713					0.0493696359334308
GWRRVTRAGPG	11	Unmodified	_GWRRVTRAGPG_					0	0	0		ENST00000254325.8_1_19:14073549-14074364:-|nuORF	ENST00000254325.8_1_19:14073549-14074364:-|nuORF	ENST00000254325.8_1_19:14073549-14074364:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.169921875	2	606.839062	1211.66357	-0.15669	-9.5086E-05	2.7562	0.0016725	2.5995	0.0015775	606.8400220199883	43.725	0.55974	44.175	43.963	44.523	0.45025					16	13	2	0	0	0	0.17442	1	3980	3980		24.232	4.9691	1	524490			13647	9321	9373	9382	15714	15714					0.0662066819145366
GWRWALGLL	9	Unmodified	_GWRWALGLL_					0	0	0		ENST00000481697.5_1_7:102389635-102389809:+|nuORF	ENST00000481697.5_1_7:102389635-102389809:+|nuORF	ENST00000481697.5_1_7:102389635-102389809:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.2538452148438	2	536.308544	1070.60253	-0.13346	-7.1578E-05	-1.0692	-0.00057344	-1.2027	-0.00064502	536.3077277766497	79.12	0.80779	79.531	79.269	80.077	0.4106					26	18	2	0	0	0	0.20789	1	9090	9090		20.482	0	1	134910			13648	12465	9374	9383	15715	15715					0.07005763159327216
GWRWHLIKQVR	11	Unmodified	_GWRWHLIKQVR_					0	0	0			REV__nc|ENSG00000170004|Q12873-3|CHD3	REV__nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.9568786621094	3	493.621233	1477.84187	0.40491	0.00019987	-0.70258	-0.00034681	-0.29767	-0.00014694	493.62080407624626	30.653	0.85216	30.651	30.205	31.057	-0.0022526					107	42	3	0	0	0	0.7896	1	1376	1376		13.508	1.0751	1	258510	+		13649	30022	9375	9384	15716	15716					0.12206338110468096
GWRWKIMI	8	Unmodified	_GWRWKIMI_					0	0	0		nc|ENSG00000153132|O14967-2|CLGN;ENSG00000153132|ENST00000325617|CLGN	nc|ENSG00000153132|O14967-2|CLGN	nc|ENSG00000153132|O14967-2|CLGN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.1626586914062	2	545.304947	1088.59534	-1.1313	-0.00061693	3.2285	0.0017605	2.0971	0.0011436	545.3066172513352	38.551	0.86737	38.893	38.577	39.444	0.34187					40	20	4	0	0	0	0.4196	1	3245	3245		7.6903	4.5311	1	599260			13650	5215	9376	9385	15717	15717					0.05458707287243669
GWSNIALAII	10	Unmodified	_GWSNIALAII_					0	0	0			REV__ENSG00000007216|ENST00000314669|SLC13A2	REV__ENSG00000007216|ENST00000314669|SLC13A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7814331054688	2	529.305667	1056.59678	0.7255	0.00038401	1.7368	0.00091932	2.4623	0.0013033	529.3061950967437	49.652	0.40539	50.497	50.194	50.599	0.84501					16	9	2	0	0	0	0.37624	1	4838	4838		66.429	13.078	1	308240	+		13651	16119	9377	9386	15718	15718					0.07074619856962272
GWSVIGYLVFP	11	Unmodified	_GWSVIGYLVFP_					0	0	0			REV__nc|ENSG00000187950|Q7RTY7|OVCH1	REV__nc|ENSG00000187950|Q7RTY7|OVCH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.333740234375	2	619.334424	1236.6543	0.71946	0.00044559	-3.9476	-0.0024449	-3.2281	-0.0019993	619.331937270121	58.256	0.91434	58.809	58.428	59.343	0.55323					67	21	4	0	0	0	0.32558	1	6095	6095		68.787	10.557	1	3775100	+		13652	30115	9378	9387	15719	15719					0.04543462062565595
GWSWAPGIS	9	Unmodified	_GWSWAPGIS_					0	0	0		ENST00000539960.1_1_11:60665249-60666641:-|nuORF	ENST00000539960.1_1_11:60665249-60666641:-|nuORF	ENST00000539960.1_1_11:60665249-60666641:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.734619140625	2	480.732335	959.450116	1.0522	0.00050583	2.7854	0.001339	3.8376	0.0018448	480.7336024129339	23.759	0.64035	23.377	23.153	23.794	-0.38178					20	14	2	0	0	0	0.76255	1	1088	1088		35.618	7.736	1	77887			13653	13488	9379	9388	15720	15720					-0.031230573080847535
GWTGKVRA	8	Unmodified	_GWTGKVRA_					0	0	0			REV__ENST00000330258.3_2_X:63410065-63410188:-|nuORF	REV__ENST00000330258.3_2_X:63410065-63410188:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2636413574219	2	437.748319	873.482085	-0.057713	-2.5264E-05	0.97323	0.00042603	0.91552	0.00040077	437.7477354447252	36.85	0.26857	36.832	36.641	36.91	-0.018673					8	5	2	0	0	0	0.4196	1	2381	2381		24.203	1.1603	1	38992	+		13654	25107	9380	9389	15721	15721					0.04028355165712583
GWTKRILD	8	Unmodified	_GWTKRILD_					0	0	0			REV__ENSG00000214654|ENST00000689072|B3GALT9	REV__ENSG00000214654|ENST00000689072|B3GALT9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.780029296875	2	494.782359	987.550165	-0.60063	-0.00029718	-3.4065	-0.0016855	-4.0071	-0.0019826	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.87922	1	8509	8509		31.955	1.6371	1	707910	+		13655	23658	9381	9390	15722	15722					0.05589180025708629
GWVRISVIP	9	Unmodified	_GWVRISVIP_					0	0	0			REV__ENST00000514094.5_1_4:40829092-40895410:-|nuORF	REV__ENST00000514094.5_1_4:40829092-40895410:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8074340820312	2	513.808377	1025.6022	-1.3833	-0.00071076	2.6514	0.0013623	1.2681	0.00065157	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.72402	1	4437	4437		38.806	9.6566	1	1148600	+		13656	20959	9382	9391	15723	15723					0.09042343439477918
GWVTEADQPG	10	Unmodified	_GWVTEADQPG_					0	0	0			REV__ENST00000586582.5_1_19:4543368-4543554:-|nuORF	REV__ENST00000586582.5_1_19:4543368-4543554:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.240966796875	2	530.240721	1058.46689	-0.050418	-2.6734E-05	0.60653	0.0003216	0.55611	0.00029487	530.2408868740829	111.88	0.31017	111.99	111.92	112.23	0.11118					19	10	2	0	0	0	0.85939	1	12057	12057		23.042	3.6825	1	24573	+		13657	29108	9383	9392	15724	15724					-0.06000601212804213
GWVVRPSIL	9	Unmodified	_GWVVRPSIL_					0	0	0		ENST00000475754.5_2_3:168851253-168864300:-|nuORF	ENST00000475754.5_2_3:168851253-168864300:-|nuORF	ENST00000475754.5_2_3:168851253-168864300:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.807861328125	2	513.808377	1025.6022	0.034734	1.7846E-05	1.2224	0.00062807	1.2571	0.00064592	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.78536	1	4585	4585		29.15	2.4566	1	666950			13658	12330	9384	9393	15725	15725					0.09042343439477918
GWWAAVVL	8	Unmodified	_GWWAAVVL_					0	0	0		ENST00000301019.8_1_16:88873824-88873884:+|nuORF	ENST00000301019.8_1_16:88873824-88873884:+|nuORF	ENST00000301019.8_1_16:88873824-88873884:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2492980957031	2	451.250163	900.485774	-0.60944	-0.00027501	-2.4087	-0.0010869	-3.0181	-0.0013619	451.24890898084885	67.67	1.2739	67.634	67.25	68.524	-0.035698					111	49	3	0	0	0	0.84567	1	6512	6512		24.504	2.5441	1	185140			13659	9800	9385	9394	15726	15726					0.0315502493956501
GWYKLESI	8	Unmodified	_GWYKLESI_					0	0	0			REV__ENST00000496461.5_1_16:58752244-58768198:-|nuORF	REV__ENST00000496461.5_1_16:58752244-58768198:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.819091796875	2	498.263468	994.512382	-1.0809	-0.00053856	-2.5787	-0.0012849	-3.6596	-0.0018234	498.2618556327179	38.781	0.31422	38.734	38.511	38.825	-0.047005					9	6	2	0	0	0	0.4196	1	2721	2721		18.324	7.4589	1	24966	+		13660	27752	9386	9395	15727	15727					0.014906690402312961
GYALLHLL	8	Unmodified	_GYALLHLL_					0	0	0		ENST00000465807.1_1_10:102826065-102827451:+|nuORF	ENST00000465807.1_1_10:102826065-102827451:+|nuORF	ENST00000465807.1_1_10:102826065-102827451:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2720031738281	2	450.271096	898.527639	1.3279	0.0005979	-2.5462	-0.0011465	-1.2183	-0.00054856	450.26977588030314	109.75	0.98418	109.82	109.68	110.66	0.06794					48	38	2	0	0	0	0.91333	1	13300	13300		43.626	19.122	1	742510			13661	12116	9387	9396	15728	15728					0.07431580628076517
GYAVLLLM	8	Unmodified	_GYAVLLLM_					0	0	0			REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2557067871094	2	440.254057	878.493561	-0.82975	-0.0003653	3.597	0.0015836	2.7672	0.0012183	440.2556367977485	60.313	1.0519	60.313	60.031	61.083	0.00051117					60	36	3	0	0	0	0.84567	1	5261	5261		24.504	1.4615	1	290170	+		13662	30005	9388	9397	15729	15729					0.04945416144835235
GYEPGLTI	8	Unmodified	_GYEPGLTI_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.2221374511719	2	425.221268	848.427984	-0.92314	-0.00039254	2.3157	0.00098469	1.3926	0.00059215	425.2221274474839	88.164	1.0815	88.627	88.185	89.267	0.46312					62	26	3	0	0	0	0.884	1	10418	10418		33.516	3.0119	1	883790	+		13663	22270	9389	9398	15730	15730					-0.002292817765237487
GYFLIATVW	9	Unmodified	_GYFLIATVW_					0	0	0		ENSG00000164129|ENST00000338566|NPY5R	ENSG00000164129|ENST00000338566|NPY5R	ENSG00000164129|ENST00000338566|NPY5R	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.287109375	2	535.289485	1068.56442	-0.84771	-0.00045377	-2.79	-0.0014935	-3.6377	-0.0019472	535.2878294310157	86.153	1.0232	86.6	86.194	87.217	0.44736					59	24	4	0	0	0	0.49378	1	10128	10128		52.299	2.8576	1	1143000			13664	5923	9390	9399	15731	15731					0.0328783245397517
GYGAVTRARVK	11	Unmodified	_GYGAVTRARVK_					0	0	0			REV__chr1:22882483-22892977|28|21.68|0.73|4.89|+|0|EPHB2,None|1	REV__chr1:22882483-22892977|28|21.68|0.73|4.89|+|0|EPHB2,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3436279296875	2	589.343646	1176.67274	-1.05	-0.00061881	0.02406	1.418E-05	-1.0259	-0.00060463	589.3435611680267	91.272	1.3839	91.742	90.644	92.028	0.47068					106	33	4	0	0	0	0.72106	1	10865	10865		28.081	3.8787	1	1967800	+		13665	15441	9391	9400	15732	15732					0.09147016757128767
GYGIATLLLK	10	Unmodified	_GYGIATLLLK_					0	0	0			REV__ENSG00000114374|ENST00000338981|USP9Y;REV__nc|ENSG00000124486|Q93008-3|USP9X	REV__ENSG00000114374|ENST00000338981|USP9Y	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.82666015625	2	524.823692	1047.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.27	1	102.23	101.73	102.73	-0.047981								0	0	0	0.45132	1	11160	11160		21.96	1.013	1		+		13666	18042;18587	9392	9401	15733	15733					0.11092077033845271
GYGLPMLVVVI	11	Unmodified	_GYGLPMLVVVI_					0	0	0		nc|ENSG00000174837|Q14246-4|ADGRE1;nc|ENSG00000174837|Q14246-5|ADGRE1;nc|ENSG00000174837|Q14246-2|ADGRE1;nc|ENSG00000174837|Q14246-3|ADGRE1;ENSG00000174837|ENST00000312053|ADGRE1	nc|ENSG00000174837|Q14246-4|ADGRE1	nc|ENSG00000174837|Q14246-4|ADGRE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	580.8406372070312	2	580.841028	1159.6675	-0.77464	-0.00044995	0.10201	5.9254E-05	-0.67263	-0.00039069	580.8409079649531	69.999	0.8299	69.999	69.758	70.588	0					106	43	3	0	0	0	0.74035	1	6260	6260		24.203	3.2558	1	7674300			13667	6966	9393	9402	15734	15734					0.09405576850303987
GYGSPHFTAL	10	Unmodified	_GYGSPHFTAL_					0	0	0		nc|ENSG00000204531|Q01860-2|POU5F1;ENSG00000212993|ENST00000696633|POU5F1B;ENSG00000204531|ENST00000259915|POU5F1	nc|ENSG00000204531|Q01860-2|POU5F1	nc|ENSG00000204531|Q01860-2|POU5F1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.32373046875	2	525.256174	1048.49779	-0.47453	-0.00024925	-4.0834	-0.0021448	-4.5579	-0.0023941	525.7558868362689	30.134	0.26595	30.163	30.052	30.318	0.028618					6	5	2	0	0	0	0.37624	1	1960	1960		29.15	0	1	26652			13668	8455	9394	9403	15735	15735					-0.02451403107920669
GYGTIINVVGP	11	Unmodified	_GYGTIINVVGP_					0	0	0			REV__ENSG00000137124|ENST00000377698|ALDH1B1	REV__ENSG00000137124|ENST00000377698|ALDH1B1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3167724609375	2	545.300581	1088.58661	-0.33389	-0.00018207	2.3507	0.0012819	2.0168	0.0010998	545.302042389221	90.674	0.20488	90.744	90.64	90.844	0.069328					7	4	2	0	0	0	0.16822	1	9316	9316		62.107	24.296	1	110630	+		13669	19362	9395	9404	15736	15736					0.045860121317673475
GYHGSDIETP	10	Unmodified	_GYHGSDIETP_					0	0	0		ENSG00000183876|ENST00000328668|ARSI	ENSG00000183876|ENST00000328668|ARSI	ENSG00000183876|ENST00000328668|ARSI	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.32666015625	2	538.238178	1074.4618	-0.15055	-8.103E-05	0.26414	0.00014217	0.1136	6.1142E-05	538.2387208213257	101.38	0.12249	101.41	101.33	101.45	0.031036					4	2	2	0	0	0	0.37624	1	10826	10826		63.306	17.334	1	39409			13670	7571	9396	9405	15737	15737					-0.07244905075435781
GYHTGYYMEM	10	Unmodified	_GYHTGYYMEM_					0	0	0		nc|ENSG00000205571|Q16637-4|SMN1;nc|ENSG00000205571|Q16637-3|SMN1	nc|ENSG00000205571|Q16637-4|SMN1	nc|ENSG00000205571|Q16637-4|SMN1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3794555664062	2	626.244092	1250.47363	0.92553	0.00057961	-2.2769	-0.0014259	-1.3514	-0.0008463	626.2434778701736	105.5	0.53236	105.61	105.23	105.77	0.10766					19	13	2	0	0	0	0.37624	1	11248	11248		42.396	11.892	1	67782			13671	15219	9397	9406	15738	15738					-0.14158747648116332
GYHTPLFDWE	10	Unmodified	_GYHTPLFDWE_					0	0	0		ENST00000258761.7_2_7:16745713-16745770:+|nuORF	ENST00000258761.7_2_7:16745713-16745770:+|nuORF	ENST00000258761.7_2_7:16745713-16745770:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.9786987304688	2	632.785296	1263.55604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.776	1	67.776	67.276	68.276	0								0	0	0	0.45132	1	5998	5998		30.504	4.9296	1				13672	9373	9398	9407	15739	15739					-0.06519766253245507
GYHVQAPRPP	10	Unmodified	_GYHVQAPRPP_					0	0	0		ENST00000381278.3_1_22:43089799-43091637:-|nuORF	ENST00000381278.3_1_22:43089799-43091637:-|nuORF	ENST00000381278.3_1_22:43089799-43091637:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.2876586914062	2	561.296165	1120.57778	0.022631	1.2703E-05	1.8719	0.0010507	1.8945	0.0010634	561.2970936549079	63.751	0.76986	64.138	63.919	64.689	0.38681					32	17	3	0	0	0	0.37624	1	6852	6852		37.159	1.9584	1	171210			13673	10951	9399	9408	15740	15740					0.022310832859375296
GYIGVLAAKGL	11	Unmodified	_GYIGVLAAKGL_					0	0	0			REV__ENSG00000149256|ENST00000278550|TENM4	REV__ENSG00000149256|ENST00000278550|TENM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.3184204101562	2	531.321317	1060.62808	-0.033063	-1.7567E-05	-3.6466	-0.0019375	-3.6797	-0.0019551	531.3191547732448	95.172	2.5483	95.24	94.714	97.262	0.068336					181	59	5	0	0	0	0.68378	1	9913	9913		34.173	3.6689	1	3878900	+		13674	20156	9400	9409	15741	15741					0.10019192891104467
GYIHLSGG	8	Unmodified	_GYIHLSGG_					0	0	0		nc|ENSG00000204936|Q8N6Q3|CD177;ENSG00000204936|ENST00000618265|CD177	nc|ENSG00000204936|Q8N6Q3|CD177	nc|ENSG00000204936|Q8N6Q3|CD177	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	402.2048645019531	2	402.205953	802.397353	-1.0356	-0.00041653	0.5047	0.00020299	-0.53091	-0.00021354	402.2060768778475	98.029	2.4948	98.029	96.767	99.262	0					118	59	3	0	0	0	0.86288	1	9892	9892		26.796	0	1	480830			13675	8498	9401	9410	15742	15742					-0.011750153708931066
GYIHLSGG	8	Unmodified	_GYIHLSGG_					0	0	0		nc|ENSG00000204936|Q8N6Q3|CD177;ENSG00000204936|ENST00000618265|CD177	nc|ENSG00000204936|Q8N6Q3|CD177	nc|ENSG00000204936|Q8N6Q3|CD177	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.2051696777344	2	402.205953	802.397353	-0.18632	-7.4938E-05	-0.51168	-0.0002058	-0.698	-0.00028074	402.20569515988933	98.659	2.0984	98.708	97.873	99.972	0.04982					129	48	4	0	0	0	0.89457	2	10397	10397;10443		37.028	10.232	1	1555200			13676	8498	9401	9410	15743;15744	15743					-0.011750153708931066
GYIHLSGG	8	Unmodified	_GYIHLSGG_					0	0	0		nc|ENSG00000204936|Q8N6Q3|CD177;ENSG00000204936|ENST00000618265|CD177	nc|ENSG00000204936|Q8N6Q3|CD177	nc|ENSG00000204936|Q8N6Q3|CD177	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.20538330078125	2	402.205953	802.397353	2.2889	0.00092062	-2.9581	-0.0011898	-0.66913	-0.00026913	402.20469632638094	98.499	3.236	98.444	96.673	99.909	-0.054817					141	75	3	0	0	0	0.89457	2	10599	10599;10611		37.028	5.0736	1	1723900			13677	8498	9401	9410	15745;15746	15745					-0.011750153708931066
GYIHLSGG	8	Unmodified	_GYIHLSGG_					0	0	0		nc|ENSG00000204936|Q8N6Q3|CD177;ENSG00000204936|ENST00000618265|CD177	nc|ENSG00000204936|Q8N6Q3|CD177	nc|ENSG00000204936|Q8N6Q3|CD177	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.2054138183594	2	402.205953	802.397353	3.1805	0.0012792	-3.8193	-0.0015361	-0.63874	-0.00025691	402.20435516833464	98.401	2.1792	98.45	97.455	99.634	0.048157					140	50	4	0	0	0	0.89457	2	10483	10483;10494		37.028	5.0736	1	1692900			13678	8498	9401	9410	15747;15748	15747					-0.011750153708931066
GYIHLSGG	8	Unmodified	_GYIHLSGG_					0	0	0		nc|ENSG00000204936|Q8N6Q3|CD177;ENSG00000204936|ENST00000618265|CD177	nc|ENSG00000204936|Q8N6Q3|CD177	nc|ENSG00000204936|Q8N6Q3|CD177	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.20556640625	2	402.205953	802.397353	1.3419	0.00053973	-2.1505	-0.00086493	-0.80855	-0.0003252	402.2050843296539	98.494	1.2071	98.87	98.367	99.574	0.37679					57	29	3	0	0	0	0.9159	1	11914	11914		44.531	5.7249	1	1080300			13679	8498	9401	9410	15749	15749					-0.011750153708931066
GYIKPSLHT	9	Unmodified	_GYIKPSLHT_					0	0	0			REV__nc|ENSG00000136243|O15504-2|NUP42	REV__nc|ENSG00000136243|O15504-2|NUP42	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.2799377441406	2	508.282192	1014.54983	-0.055639	-2.828E-05	-3.7761	-0.0019193	-3.8318	-0.0019476	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.78058	1	8909	8909		30.504	0	1	1918800	+		13680	29870	9402	9411	15750	15750					0.04313760305831238
GYILPSRLI	9	Unmodified	_GYILPSRLI_					0	0	0			REV__nc|ENSG00000140832|Q96A59-2|MARVELD3	REV__nc|ENSG00000140832|Q96A59-2|MARVELD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3141479492188	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.69914	2	12105	12105;12346		40.573	4.9543	1	4038100	+		13681	29892	9403	9412	15751;15752	15751					0.10343210236646883
GYINRINRK	9	Unmodified	_GYINRINRK_					0	0	0			REV__ENSG00000157999|ENST00000409061|ANKRD61	REV__ENSG00000157999|ENST00000409061|ANKRD61	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.330322265625	2	567.330539	1132.64652	-0.51077	-0.00028978	-0.70581	-0.00040043	-1.2166	-0.0006902	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.78058	1	9431	9431		30.504	2.4222	1	11042000	+		13682	20577	9404	9413	15753	15753					0.08550747585650242
GYINRINRK	9	Unmodified	_GYINRINRK_					0	0	0			REV__ENSG00000157999|ENST00000409061|ANKRD61	REV__ENSG00000157999|ENST00000409061|ANKRD61	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3294067382812	2	567.330539	1132.64652	1.8589	0.0010546	-3.1789	-0.0018035	-1.32	-0.00074889	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.7932	1	10128	10128		23.042	1.0826	1	15439000	+		13683	20577	9404	9413	15754	15754					0.08550747585650242
GYINRINRK	9	Unmodified	_GYINRINRK_					0	0	0			REV__ENSG00000157999|ENST00000409061|ANKRD61	REV__ENSG00000157999|ENST00000409061|ANKRD61	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3307495117188	2	567.330539	1132.64652	-1.3957	-0.00079181	0.07479	4.2431E-05	-1.3209	-0.00074938	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.7932	1	9155	9155		17.365	0.89182	1	17338000	+		13684	20577	9404	9413	15755	15755					0.08550747585650242
GYINRINRK	9	Unmodified	_GYINRINRK_					0	0	0			REV__ENSG00000157999|ENST00000409061|ANKRD61	REV__ENSG00000157999|ENST00000409061|ANKRD61	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3298950195312	2	567.330539	1132.64652	-1.3958	-0.00079187	0.45547	0.0002584	-0.94031	-0.00053347	567.3306768153905	113.32	5.91	113.27	113.24	119.15	-0.044777					245	138	3	0	0	0	0.78536	1	12198	12198		29.15	0	1	1691900	+		13685	20577	9404	9413	15756	15756					0.08550747585650242
GYIPSASM	8	Unmodified	_GYIPSASM_					0	0	0		nc|ENSG00000101079|Q9UGV2-3|NDRG3;nc|ENSG00000101079|Q9UGV2-2|NDRG3;ENSG00000101079|ENST00000349004|NDRG3	nc|ENSG00000101079|Q9UGV2-3|NDRG3	nc|ENSG00000101079|Q9UGV2-3|NDRG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.1942138671875	2	413.194196	824.37384	2.9123	0.0012034	-4.0466	-0.001672	-1.1342	-0.00046866	413.192422420302	85.553	2.8893	85.61	84.543	87.432	0.057899					115	66	2	0	0	0	0.91005	1	8683	8683		42.474	0	1	1337900			13686	1897	9405	9414	15757	15757					-0.0453719719973833
GYIQKKKEL	9	Unmodified	_GYIQKKKEL_					0	0	0		ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF	ENSG00000139687|ENST00000267163|RB1	ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8297119140625	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.69624	2	8638	8476;8638		40.778	2.4566	1	1181400			13687	4390	9406	9415	15758;15759	15759					0.10094577919812764
GYIQKKKEL	9	Unmodified	_GYIQKKKEL_					0	0	0		ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF	ENSG00000139687|ENST00000267163|RB1	ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8302612304688	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.78536	1	8708	8708		29.15	1.2673	1	3935500			13688	4390	9406	9415	15760	15760					0.10094577919812764
GYIQKKKEL	9	Unmodified	_GYIQKKKEL_					0	0	0		ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF	ENSG00000139687|ENST00000267163|RB1	ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8297729492188	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.74721	1	8834	8834		37.159	1.5408	1	1844500			13689	4390	9406	9415	15761	15761					0.10094577919812764
GYIQKKKEL	9	Unmodified	_GYIQKKKEL_					0	0	0		ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF	ENSG00000139687|ENST00000267163|RB1	ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8298950195312	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.76255	2	8729	8729;8884		35.618	1.6967	1	2008100			13690	4390	9406	9415	15762;15763	15762					0.10094577919812764
GYIQKKKEL	9	Unmodified	_GYIQKKKEL_					0	0	0		ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF	ENSG00000139687|ENST00000267163|RB1	ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8299560546875	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.62081	1	8956	8956		45.952	1.8352	1	6029400			13691	4390	9406	9415	15764	15764					0.10094577919812764
GYISRRSKKL	10	Unmodified	_GYISRRSKKL_					0	0	0			REV__ENST00000339514.8_1_2:192234998-192248009:+|nuORF	REV__ENST00000339514.8_1_2:192234998-192248009:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3668823242188	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85251	3	12256	12256;12588;12798		27.882	5.9224	1	3346600	+		13692	25232	9407	9416	15765;15766;15767	15765					0.12459876308275852
GYIVAAVVKIS	11	Unmodified	_GYIVAAVVKIS_					0	0	0		ENSG00000172324|ENST00000302040|OR5A2	ENSG00000172324|ENST00000302040|OR5A2	ENSG00000172324|ENST00000302040|OR5A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3405151367188	2	560.342249	1118.66995	-1.1297	-0.00063301	-2.5217	-0.001413	-3.6514	-0.002046	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.7342	1	11299	11299		25.574	2.5316	1	84412000			13693	6761	9408	9417	15768	15768					0.11535748579603933
GYKATGKMKIF	11	Unmodified	_GYKATGKMKIF_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54;ENST00000342887.1_1_12:97043703-97159031:+|nuORF	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.8457641601562	2	622.347009	1242.67946	-0.17246	-0.00010733	-0.09613	-5.9826E-05	-0.26859	-0.00016716	622.3467162320231	96.253	1.81	96.253	95.614	97.424	0					80	41	2	0	0	0	0.7144	1	9598	9598		29.17	2.4771	1	250670			13694	7939	9409	9418	15769	15769					0.06783193593491887
GYKGLSVR	8	Unmodified	_GYKGLSVR_					0	0	0		nc|ENSG00000165521|Q05BV3|EML5;ENSG00000165521|ENST00000554922|EML5;nc|ENSG00000165521|Q05BV3-4|EML5;nc|ENSG00000165521|Q05BV3-2|EML5	nc|ENSG00000165521|Q05BV3|EML5	nc|ENSG00000165521|Q05BV3|EML5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2557373046875	2	440.255977	878.497401	-0.80222	-0.00035318	-0.17673	-7.7804E-05	-0.97895	-0.00043099	440.255838119575	56.406	1.4135	56.802	56.556	57.97	0.39672					60	33	3	0	0	0	0.86288	1	5828	5828		26.796	2.2921	1	2568800			13695	6090	9410	9419	15770	15770					0.05329221962904285
GYKILIPKGS	10	Unmodified	_GYKILIPKGS_					0	0	0		ENSG00000109927|ENST00000392793|TECTA	ENSG00000109927|ENST00000392793|TECTA	ENSG00000109927|ENST00000392793|TECTA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3267211914062	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.85466	1	12764	12764		20.947	1.587	1	4041000			13696	2494	9411	9420	15771	15771					0.10939479408125408
GYKILVKQAS	10	Unmodified	_GYKILVKQAS_					0	0	0			REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8298950195312	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.77314	1	8778	8778		40.778	4.3314	1	3935500	+		13697	22329	9412	9421	15772	15772					0.10094577919812764
GYKILVKQAS	10	Unmodified	_GYKILVKQAS_					0	0	0			REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8300170898438	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.86218	2	9261	9261;9429		32.812	2.3088	1	5219600	+		13698	22329	9412	9421	15773;15774	15773					0.10094577919812764
GYKILVKQAS	10	Unmodified	_GYKILVKQAS_					0	0	0			REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8300170898438	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.86589	1	8737	8737		29.15	1.2673	1	1844500	+		13699	22329	9412	9421	15775	15775					0.10094577919812764
GYKILVKQAS	10	Unmodified	_GYKILVKQAS_					0	0	0			REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8300170898438	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.85694	2	9252	9071;9252		32.812	1.2826	1	6402500	+		13700	22329	9412	9421	15776;15777	15777					0.10094577919812764
GYKILVKQAS	10	Unmodified	_GYKILVKQAS_					0	0	0			REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8299560546875	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.8608	1	8908	8908		34.173	6.0911	1	2008100	+		13701	22329	9412	9421	15778	15778					0.10094577919812764
GYKILVKQAS	10	Unmodified	_GYKILVKQAS_					0	0	0			REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.830078125	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.64457	2	9026	9026;9262		47.657	6.8792	1	6029400	+		13702	22329	9412	9421	15779;15780	15779					0.10094577919812764
GYKILVKQAS	10	Unmodified	_GYKILVKQAS_					0	0	0			REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8302612304688	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.86589	1	10694	10694		29.15	2.4566	1	5381700	+		13703	22329	9412	9421	15781	15781					0.10094577919812764
GYKIVLDRFVS	11	Unmodified	_GYKIVLDRFVS_					0	0	0			REV__ENSG00000182481|ENST00000330459|KPNA2	REV__ENSG00000182481|ENST00000330459|KPNA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.871826171875	2	648.869163	1295.72377	-0.023314	-1.5128E-05	3.9055	0.0025341	3.8822	0.002519	648.8718934238251	99.773	2.6976	99.773	98.424	101.12	0					124	64	3	0	0	0	0.60058	1	10118	10118		44.377	0.26039	1	156470	+		13704	22525	9413	9422	15782	15782					0.08773921011311359
GYKKDLLSPL	10	Unmodified	_GYKKDLLSPL_					0	0	0		ENST00000488236.5_1_3:9495468-9506425:+|nuORF	ENST00000488236.5_1_3:9495468-9506425:+|nuORF	ENST00000488236.5_1_3:9495468-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297729492188	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.86763	1	9264	9264		26.693	0	1	11042000			13705	12618	9414	9423	15783	15783					0.0881915819995811
GYKKPPPATG	10	Unmodified	_GYKKPPPATG_					0	0	0		nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1;ENSG00000134369|ENST00000685211|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1;nc|ENSG00000134369|Q8NEY1-5|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2799072265625	2	508.282192	1014.54983	-0.88176	-0.00044818	-2.9285	-0.0014885	-3.8102	-0.0019367	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.67571	3	8588	8499;8588;8672		45.972	13.874	1	1261800			13706	3931	9415	9424	15784;15785;15786	15785					0.043137603058426066
GYKKPPPATG	10	Unmodified	_GYKKPPPATG_					0	0	0		nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1;ENSG00000134369|ENST00000685211|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1;nc|ENSG00000134369|Q8NEY1-5|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.2799072265625	2	508.282192	1014.54983	-0.055639	-2.828E-05	-3.7761	-0.0019193	-3.8318	-0.0019476	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.64457	3	9005	8970;9005;9029		47.657	8.8512	1	1918800			13707	3931	9415	9424	15787;15788;15789	15788					0.043137603058426066
GYKKPPPATG	10	Unmodified	_GYKKPPPATG_					0	0	0		nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1;ENSG00000134369|ENST00000685211|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1;nc|ENSG00000134369|Q8NEY1-5|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2797546386719	2	508.282192	1014.54983	0.22565	0.0001147	-4.0704	-0.0020689	-3.8448	-0.0019542	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.67571	3	9151	9127;9151;9260		45.972	4.9991	1	1820400			13708	3931	9415	9424	15790;15791;15792	15791					0.043137603058426066
GYKKPPPATG	10	Unmodified	_GYKKPPPATG_					0	0	0		nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1;ENSG00000134369|ENST00000685211|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1;nc|ENSG00000134369|Q8NEY1-5|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.27972412109375	2	508.282192	1014.54983	-0.39652	-0.00020155	-3.6656	-0.0018632	-4.0621	-0.0020647	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.6116	5	8905	8748;8820;8856;8880;8905		49.442	8.8131	1	2080300			13709	3931	9415	9424	15793;15794;15795;15796;15797	15797					0.043137603058426066
GYKKPPPATG	10	Unmodified	_GYKKPPPATG_					0	0	0		nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1;ENSG00000134369|ENST00000685211|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1;nc|ENSG00000134369|Q8NEY1-5|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2801208496094	2	508.282192	1014.54983	-1.5862	-0.00080625	-2.312	-0.0011752	-3.8982	-0.0019814	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.6116	2	8752	8752;8836		49.442	6.9671	1	1814000			13710	3931	9415	9424	15798;15799	15798					0.043137603058426066
GYKLFNNVL	9	Unmodified	_GYKLFNNVL_					0	0	0			REV__ENSG00000117528|ENST00000370214|ABCD3	REV__ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	534.2926025390625	2	534.297842	1066.58113	-1.4515	-0.00077555	-4.4874	-0.0023976	-5.9389	-0.0031732	534.2954475204509	86.243	1.5364	86.401	85.976	87.513	0.15851					55	35	2	0	0	0	0.72402	1	8449	8449		38.806	3.1879	1	105510	+		13711	18268	9416	9425	15800	15800					0.05050333339931967
GYKLFNNVL	9	Unmodified	_GYKLFNNVL_					0	0	0			REV__ENSG00000117528|ENST00000370214|ABCD3	REV__ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	534.2938842773438	2	534.297842	1066.58113	-1.5022	-0.00080264	-4.4409	-0.0023727	-5.9431	-0.0031754	534.295427117142	88.335	3.7823	88.504	87.046	90.828	0.16923					157	88	2	0	0	0	0.78058	1	8779	8779		30.504	0	1	483520	+		13712	18268	9416	9425	15801	15801					0.05050333339931967
GYKPFIWRERR	11	Unmodified	_GYKPFIWRERR_					0	0	0		ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	503.1062927246094	3	503.280877	1506.8208	-0.098738	-4.9693E-05	-4.385	-0.0022069	-4.4837	-0.0022566	503.2786624707894	45.626	0.45298	45.558	45.356	45.809	-0.068634					16	11	2	0	0	0	0.17863	1	3324	3324		14.086	8.9436	1	113770			13713	9430	9417	9426	15802	15802					0.08766328010960933
GYKPFIWRERR	11	Unmodified	_GYKPFIWRERR_					0	0	0		ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	503.280877	1506.8208	-0.54991	-0.00027676	-3.283	-0.0016523	-3.8329	-0.001929	503.27887606437776	45.619	0.31349	45.631	45.437	45.751	0.012058	0.032022	0.0012956	NaN	14.086	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	117990			13714	9430	9417	9426							0.08766328010960933
GYKPFIWRERR	11	Unmodified	_GYKPFIWRERR_					0	0	0		ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	503.280877	1506.8208	0.3086	0.00015531	-5.2586	-0.0026466	-4.95	-0.0024913	503.27853488443	45.566	0.3313	45.608	45.484	45.815	0.042599	0.0092909	-0.0016874	NaN	14.086	23	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139300			13715	9430	9417	9426							0.08766328010960933
GYKSHLLAL	9	Unmodified	_GYKSHLLAL_					0	0	0			REV__ENSG00000143217|ENST00000368012|NECTIN4	REV__ENSG00000143217|ENST00000368012|NECTIN4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.29022216796875	2	501.292559	1000.57057	-0.97974	-0.00049113	-3.1223	-0.0015652	-4.1021	-0.0020563	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.72402	1	7973	7973		38.806	0.99462	1	2111000	+		13716	19784	9418	9427	15803	15803					0.07030350685522535
GYKTLRFS	8	Unmodified	_GYKTLRFS_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.2670593261719	2	486.269084	970.523616	-0.087647	-4.262E-05	-3.8323	-0.0018635	-3.9199	-0.0019061	486.26710603472304	86.356	4.0954	86.423	85.117	89.212	0.067444					314	95	4	0	0	0	0.884	1	8741	8741		33.516	0.70317	1	1700900	+		13717	22167	9419	9428	15804	15804					0.0371749113437545
GYKVIHITG	9	Unmodified	_GYKVIHITG_					0	0	0		nc|ENSG00000151322|Q8IXF0-4|NPAS3;nc|ENSG00000151322|Q8IXF0-2|NPAS3;nc|ENSG00000151322|Q8IXF0-3|NPAS3;ENSG00000151322|ENST00000356141|NPAS3;chr14:32935003-33215182|13|21.85|0.31|6.14|+|ENST00000551634|NPAS3,NPAS3;chr14:33215426-33367192|18|10.78|0.44|4.62|+|ENST00000551492|NPAS3,NPAS3;chr14:32935003-33055905|21|18.76|0.18|6.7|+|ENST00000551492|NPAS3,NPAS3	nc|ENSG00000151322|Q8IXF0-4|NPAS3	nc|ENSG00000151322|Q8IXF0-4|NPAS3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.30072021484375	2	494.284734	986.554916	0.76372	0.00037749	2.3362	0.0011548	3.0999	0.0015323	494.28692682690775	97.117	0.5794	97.281	96.966	97.545	0.16316					26	13	3	0	0	0	0.20789	1	9997	9997		44.117	15.863	1	350640			13718	167	9420	9429	15805	15805					0.06110064168467488
GYLEALTRFLP	11	Unmodified	_GYLEALTRFLP_					0	0	0			REV__nc|ENSG00000139880|Q86UP0|CDH24	REV__nc|ENSG00000139880|Q86UP0|CDH24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.359130859375	2	640.355888	1278.69722	1.5852	0.0010151	2.9459	0.0018864	4.5311	0.0029015	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.638	1	10351	10351		40.058	4.9061	1	616450	+		13719	19578	9421	9430	15806	15806					0.0690223211997818
GYLFLNRTVTL	11	Unmodified	_GYLFLNRTVTL_					0	0	0		nc|ENSG00000179846|Q17RQ9|NKPD1;ENSG00000179846|ENST00000686631|NKPD1	nc|ENSG00000179846|Q17RQ9|NKPD1	nc|ENSG00000179846|Q17RQ9|NKPD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.8724365234375	2	648.869163	1295.72377	2.3415	0.0015193	2.0631	0.0013387	4.4046	0.002858	648.8704740715605	99.639	2.1468	99.585	98.646	100.79	-0.053734					125	49	3	0	0	0	0.5603	1	10800	10800		47.657	2.6351	1	323740			13720	7297	9422	9431	15807	15807					0.08773921011288621
GYLGLLGRTL	10	Unmodified	_GYLGLLGRTL_					0	0	0		ENST00000543571.5_1_6:150023399-150039140:-|nuORF	ENST00000543571.5_1_6:150023399-150039140:-|nuORF	ENST00000543571.5_1_6:150023399-150039140:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.816650390625	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.82886	1	8484	8484		37.812	3.639	1	1422300			13721	13555	9423	9432	15808	15808					0.09498308748334239
GYLIFYII	8	Unmodified	_GYLIFYII_					0	0	0		ENSG00000127995|ENST00000297273|CASD1	ENSG00000127995|ENST00000297273|CASD1	ENSG00000127995|ENST00000297273|CASD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2902526855469	2	501.288954	1000.56336	0.83893	0.00042055	1.9699	0.00098751	2.8089	0.0014081	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.88393	1	8563	8563		33.493	4.3229	1	2850500			13722	3523	9424	9433	15809	15809					0.06309618085094826
GYLIPLTQ	8	Unmodified	_GYLIPLTQ_					0	0	0		ENSG00000129173|ENST00000250024|E2F8	ENSG00000129173|ENST00000250024|E2F8	ENSG00000129173|ENST00000250024|E2F8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.9484558105469	2	452.760561	903.506569	-0.13696	-6.2009E-05	-2.9537	-0.0013373	-3.0907	-0.0013993	452.7590435565181	107.42	0.66506	107.39	107.04	107.7	-0.034401					28	15	2	0	0	0	0.4196	1	11725	11725		23.042	10.836	1	207320			13723	3576	9425	9434	15810	15810					0.0509557052856735
GYLKSLPRV	9	Unmodified	_GYLKSLPRV_					0	0	0		nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	nc|ENSG00000106100|Q9Y239-3|NOD1	nc|ENSG00000106100|Q9Y239-3|NOD1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.8173828125	2	516.813659	1031.61277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.23	1	115.23	114.73	115.73	-0.0021133								0	0	0	0.29796	1	13889	13889		31.53	4.8369	1				13724	2280	9426	9435	15811	15811					0.09822326093899392
GYLKVLRLS	9	Unmodified	_GYLKVLRLS_					0	0	0			REV__ENSG00000147251|ENST00000276202|DOCK11	REV__ENSG00000147251|ENST00000276202|DOCK11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8267211914062	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.74721	3	10009	10009;10182;10350		37.159	8.9254	1	15330000	+		13725	20062	9427	9436	15812;15813;15814	15812					0.12214899127980061
GYLKVLRLS	9	Unmodified	_GYLKVLRLS_					0	0	0			REV__ENSG00000147251|ENST00000276202|DOCK11	REV__ENSG00000147251|ENST00000276202|DOCK11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8270263671875	2	524.829309	1047.64407	-0.12962	-6.8027E-05	-3.5193	-0.001847	-3.6489	-0.001915	524.8273126123019	102.03	1.1787	102.23	101.8	102.98	0.19483					72	28	3	0	0	0	0.78124	1	10702	10702		30.318	9.3708	1	693200	+		13726	20062	9427	9436	15815	15815					0.12214899127980061
GYLKVLRLS	9	Unmodified	_GYLKVLRLS_					0	0	0			REV__ENSG00000147251|ENST00000276202|DOCK11	REV__ENSG00000147251|ENST00000276202|DOCK11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8274536132812	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.78983	1	10374	10374		27.882	3.6795	1	23918000	+		13727	20062	9427	9436	15816	15816					0.12214899127980061
GYLLLRSPN	9	Unmodified	_GYLLLRSPN_					0	0	0		ENST00000586136.5_1_19:30097284-30104129:+|nuORF	ENST00000586136.5_1_19:30097284-30104129:+|nuORF	ENST00000586136.5_1_19:30097284-30104129:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.793212890625	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.78536	1	8804	8804		29.15	2.4566	1	817800			13728	14158	9428	9437	15817	15817					0.06185449197187154
GYLLYLVFGAV	11	Unmodified	_GYLLYLVFGAV_					0	0	0		ENSG00000135750|ENST00000366621|KCNK1	ENSG00000135750|ENST00000366621|KCNK1	ENSG00000135750|ENST00000366621|KCNK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.56488037109375	3	405.565509	1213.6747	0.092234	3.7407E-05	-2.0224	-0.0008202	-1.9301	-0.00078279	405.5646064688323	59.947	1.8016	59.915	58.946	60.747	-0.031731					126	47	3	0	0	0	0.75544	1	5702	5702		20.837	7.8797	1	288430			13729	4050	9429	9438	15818	15818					0.07640632722359442
GYLRPKPPRPK	11	Unmodified	_GYLRPKPPRPK_					0	0	0		nc|ENSG00000179111|Q9BYE0|HES7;ENSG00000179111|ENST00000541682|HES7	nc|ENSG00000179111|Q9BYE0|HES7	nc|ENSG00000179111|Q9BYE0|HES7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.93365478515625	3	436.934818	1307.78262	0.49799	0.00021759	-2.4464	-0.0010689	-1.9484	-0.00085131	436.93369927878706	20.732	2.5953	20.273	19.595	22.19	-0.4591					152	59	4	0	0	0	0.76579	1	748	748		18.531	1.3643	1	492360			13730	7244	9430	9439	15819	15819					0.14104442096277126
GYLTLIPRKF	10	Unmodified	_GYLTLIPRKF_					0	0	0		ENST00000538260.5_1_3:137928686-137928734:+|nuORF	ENST00000538260.5_1_3:137928686-137928734:+|nuORF	ENST00000538260.5_1_3:137928686-137928734:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3665771484375	2	604.363516	1206.71248	3.6458	0.0022034	1.558	0.00094162	5.2038	0.003145	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.86225	1	12915	12915		20.947	0	1	5883900			13731	13462	9431	9440	15820	15820					0.11739143707836774
GYLVANGEL	9	Unmodified	_GYLVANGEL_					0	0	0			REV__ENSG00000002726|ENST00000360937|AOC1	REV__ENSG00000002726|ENST00000360937|AOC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.24462890625	2	468.245275	934.475997	-0.88554	-0.00041465	-0.24046	-0.00011259	-1.126	-0.00052724	468.2450126988005	105.41	2.3732	105.41	104.2	106.57	0					115	56	4	0	0	0	0.47272	3	10899	10863;10886;10899		53.351	12.162	1	874040	+		13732	16046	9432	9441	15821;15822;15823	15823					0.006137921435083626
GYLVANGEL	9	Unmodified	_GYLVANGEL_					0	0	0			REV__ENSG00000002726|ENST00000360937|AOC1	REV__ENSG00000002726|ENST00000360937|AOC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.24456787109375	2	468.245275	934.475997	0.22264	0.00010425	-1.244	-0.0005825	-1.0214	-0.00047825	468.24455399922584	105.74	1.8615	105.78	105.17	107.03	0.038322					109	43	4	0	0	0	0.76255	1	11534	11534		35.618	7.736	1	1899000	+		13733	16046	9432	9441	15824	15824					0.006137921435083626
GYLVANGEL	9	Unmodified	_GYLVANGEL_					0	0	0			REV__ENSG00000002726|ENST00000360937|AOC1	REV__ENSG00000002726|ENST00000360937|AOC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.24481201171875	2	468.245275	934.475997	-0.96702	-0.0004528	-0.0042433	-1.9869E-06	-0.97126	-0.00045479	468.24514745464245	105.75	1.401	105.91	105.43	106.84	0.15924					70	34	3	0	0	0	0.64922	2	11294	11294;11308		44.117	9.9443	1	1263800	+		13734	16046	9432	9441	15825;15826	15825					0.006137921435083626
GYLVANGEL	9	Unmodified	_GYLVANGEL_					0	0	0			REV__ENSG00000002726|ENST00000360937|AOC1	REV__ENSG00000002726|ENST00000360937|AOC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2449951171875	2	468.245275	934.475997	0.7719	0.00036144	-1.8169	-0.00085076	-1.045	-0.00048932	468.244305039693	105.85	1.4355	105.95	105.31	106.74	0.099007					75	35	4	0	0	0	0.78058	2	11300	11300;11312		30.504	2.4321	1	1074800	+		13735	16046	9432	9441	15827;15828	15827					0.006137921435083626
GYLVANGEL	9	Unmodified	_GYLVANGEL_					0	0	0			REV__ENSG00000002726|ENST00000360937|AOC1	REV__ENSG00000002726|ENST00000360937|AOC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.24432373046875	2	468.245275	934.475997	3.3472	0.0015673	-4.4591	-0.002088	-1.1119	-0.00052066	468.24305217377116	104.91	1.7279	105.14	104.51	106.24	0.22681					99	43	3	0	0	0	0.78983	1	12818	12818		27.882	1.0861	1	787100	+		13736	16046	9432	9441	15829	15829					0.006137921435083626
GYLVGSIV	8	Unmodified	_GYLVGSIV_					0	0	0			REV__ENST00000503404.5_1_4:159156813-159174676:+|nuORF	REV__ENST00000503404.5_1_4:159156813-159174676:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.23291015625	2	404.234179	806.453805	-1.8251	-0.00073778	-1.1309	-0.00045714	-2.956	-0.0011949	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.86791	1	8479	8479		28.254	1.4582	1	3315300	+		13737	21036	9433	9442	15830	15830					0.042836124657469554
GYLVLSTLSKL	11	Unmodified	_GYLVLSTLSKL_					0	0	0			REV__ENST00000518140.5_1_5:168199753-168727722:-|nuORF	REV__ENST00000518140.5_1_5:168199753-168727722:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.3585205078125	2	597.360639	1192.70673	-0.24184	-0.00014447	-3.9713	-0.0023723	-4.2131	-0.0025168	597.3578636523395	100.56	3.0718	100.56	99.06	102.13	0					172	73	4	0	0	0	0.74763	1	10253	10253		22.58	1.6327	1	2923800	+		13738	22666	9434	9443	15831	15831					0.11808000405494568
GYLVLSTLSKL	11	Unmodified	_GYLVLSTLSKL_					0	0	0			REV__ENST00000518140.5_1_5:168199753-168727722:-|nuORF	REV__ENST00000518140.5_1_5:168199753-168727722:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.3584594726562	2	597.360639	1192.70673	-0.45682	-0.00027289	-3.5287	-0.0021079	-3.9855	-0.0023808	597.3582006630761	100.19	3.2446	100.23	98.977	102.22	0.046349					174	76	4	0	0	0	0.73893	1	10806	10806		24.519	2.5593	1	4145900	+		13739	22666	9434	9443	15832	15832					0.11808000405494568
GYLVSSLL	8	Unmodified	_GYLVSSLL_					0	0	0		ENST00000367941.6_1_6:132779201-132779417:-|nuORF	ENST00000367941.6_1_6:132779201-132779417:-|nuORF	ENST00000367941.6_1_6:132779201-132779417:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2459411621094	2	426.247286	850.48002	-0.1821	-7.7619E-05	-2.626	-0.0011193	-2.8081	-0.0011969	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.88915	1	8934	8934		35.201	6.9464	1	3805200			13740	10574	9435	9444	15833	15833					0.04879881637236849
GYLVSSLL	8	Unmodified	_GYLVSSLL_					0	0	0		ENST00000367941.6_1_6:132779201-132779417:-|nuORF	ENST00000367941.6_1_6:132779201-132779417:-|nuORF	ENST00000367941.6_1_6:132779201-132779417:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.2458801269531	2	426.247286	850.48002	-1.7038	-0.00072625	-1.2223	-0.00052102	-2.9262	-0.0012473	426.246697883185	87.448	3.9173	87.649	85.72	89.637	0.20114					165	92	2	0	0	0	0.86288	1	8670	8670		26.796	0	1	4015800			13741	10574	9435	9444	15834	15834					0.04879881637236849
GYMLISPRKI	10	Unmodified	_GYMLISPRKI_					0	0	0			REV__ENST00000354817.7_1_11:13743392-13749148:+|nuORF	REV__ENST00000354817.7_1_11:13743392-13749148:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3434448242188	2	589.341726	1176.6689	-1.05	-0.00061881	3.2818	0.0019341	2.2318	0.0013153	589.3435611680267	91.272	1.3839	91.742	90.644	92.028	0.47068					106	33	4	0	0	0	0.8651	1	10878	10878		25.574	1.0549	1	1967800	+		13742	25364	9436	9445	15835	15835					0.08763210939059718
GYMRIQQFRKA	11	Unmodified	_GYMRIQQFRKA_					0	0	0		nc|ENSG00000244731|P0C0L4-2|C4A;ENSG00000244731|ENST00000428956|C4A;ENSG00000224389|ENST00000435363|C4B	nc|ENSG00000244731|P0C0L4-2|C4A	nc|ENSG00000244731|P0C0L4-2|C4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.58966064453125	3	466.587201	1396.73977	-0.023047	-1.0753E-05	4.4376	0.0020705	4.4145	0.0020598	466.58915281637627	58.428	0.8177	58.397	58.018	58.836	-0.030888					58	24	3	0	0	0	0.71207	1	5455	5455		29.551	6.9892	1	355430			13743	8825	9437	9446	15836	15836					0.05727303976550502
GYMRIQQFRKA	11	Unmodified	_GYMRIQQFRKA_					0	0	0		nc|ENSG00000244731|P0C0L4-2|C4A;ENSG00000244731|ENST00000428956|C4A;ENSG00000224389|ENST00000435363|C4B	nc|ENSG00000244731|P0C0L4-2|C4A	nc|ENSG00000244731|P0C0L4-2|C4A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	466.587201	1396.73977	-1.071	-0.00049973	5.6384	0.0026308	4.5674	0.0021311	466.5896552225842	58.222	0.31108	58.309	58.223	58.534	0.087002	-0.049701	0.00097785	NaN	29.551	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114570			13744	8825	9437	9446							0.05727303976550502
GYMRIQQFRKA	11	Unmodified	_GYMRIQQFRKA_					0	0	0		nc|ENSG00000244731|P0C0L4-2|C4A;ENSG00000244731|ENST00000428956|C4A;ENSG00000224389|ENST00000435363|C4B	nc|ENSG00000244731|P0C0L4-2|C4A	nc|ENSG00000244731|P0C0L4-2|C4A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	466.587201	1396.73977	0.38675	0.00018045	3.7953	0.0017708	4.182	0.0019513	466.5889127177094	58.294	0.38306	58.405	58.162	58.545	0.11027	0.045665	-0.0016021	NaN	29.551	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75275			13745	8825	9437	9446							0.05727303976550502
GYMRIQQFRKA	11	Unmodified	_GYMRIQQFRKA_					0	0	0		nc|ENSG00000244731|P0C0L4-2|C4A;ENSG00000244731|ENST00000428956|C4A;ENSG00000224389|ENST00000435363|C4B	nc|ENSG00000244731|P0C0L4-2|C4A	nc|ENSG00000244731|P0C0L4-2|C4A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	466.587201	1396.73977	-0.67043	-0.00031282	5.0471	0.0023549	4.3766	0.0020421	466.58937507815773	58.264	0.44261	58.255	58.105	58.548	-0.0099144	-0.10431	0.00015005	NaN	29.551	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43577			13746	8825	9437	9446							0.05727303976550502
GYNASRDV	8	Unmodified	_GYNASRDV_					0	0	0		nc|ENSG00000133424|O95461-2|LARGE1;ENSG00000133424|ENST00000397394|LARGE1	nc|ENSG00000133424|O95461-2|LARGE1	nc|ENSG00000133424|O95461-2|LARGE1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.2095947265625	2	441.209224	880.403895	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.356	1	63.473	62.973	63.973	0.11739								0	0	0	0.29344	1	5545	5545		31.955	6.5047	1				13747	3878	9438	9447	15837	15837					-0.04109122210195437
GYPAHGPGG	9	Unmodified	_GYPAHGPGG_					0	0	0		ENSG00000235608|ENST00000422806|NKX1-1	ENSG00000235608|ENST00000422806|NKX1-1	ENSG00000235608|ENST00000422806|NKX1-1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24859619140625	2	406.687927	811.361301	1.1327	0.00046066	-1.1003	-0.00044748	0.03242	1.3185E-05	406.6871330067204	88.492	0.19685	88.418	88.239	88.436	-0.074005					8	4	2	0	0	0	0.20789	1	9178	9178		39.021	3.8208	1	82774			13748	8750	9439	9448	15838	15838					-0.051924725477533684
GYPEALKLVAS	11	Unmodified	_GYPEALKLVAS_					0	0	0			REV__ENST00000415279.1_1_1:106435599-106436040:+|nuORF	REV__ENST00000415279.1_1_1:106435599-106436040:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.319580078125	2	574.321514	1146.62847	-0.44784	-0.0002572	-2.9941	-0.0017196	-3.4419	-0.0019768	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.66929	1	9331	9331		36.447	3.6962	1	1099700	+		13749	16209	9440	9449	15839	15839					0.06102567820266813
GYPEALKLVAS	11	Unmodified	_GYPEALKLVAS_					0	0	0			REV__ENST00000415279.1_1_1:106435599-106436040:+|nuORF	REV__ENST00000415279.1_1_1:106435599-106436040:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3192138671875	2	574.321514	1146.62847	-1.0331	-0.00059332	-2.6119	-0.0015001	-3.645	-0.0020934	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.70737	2	9804	9804;9935		30.318	1.1477	1	1380900	+		13750	16209	9440	9449	15840;15841	15840					0.06102567820266813
GYPEALKLVAS	11	Unmodified	_GYPEALKLVAS_					0	0	0			REV__ENST00000415279.1_1_1:106435599-106436040:+|nuORF	REV__ENST00000415279.1_1_1:106435599-106436040:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3199462890625	2	574.321514	1146.62847	0.59155	0.00033974	-4.0871	-0.0023473	-3.4955	-0.0020075	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.61369	1	9716	9716		42.864	11.334	1	1777600	+		13751	16209	9440	9449	15842	15842					0.06102567820266813
GYPEALKLVAS	11	Unmodified	_GYPEALKLVAS_					0	0	0			REV__ENST00000415279.1_1_1:106435599-106436040:+|nuORF	REV__ENST00000415279.1_1_1:106435599-106436040:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3191528320312	2	574.321514	1146.62847	-1.3729	-0.0007885	-2.1573	-0.001239	-3.5302	-0.0020275	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.58425	1	9672	9672		45.972	3.108	1	1586900	+		13752	16209	9440	9449	15843	15843					0.06102567820266813
GYPGVDRRKII	11	Unmodified	_GYPGVDRRKII_					0	0	0			REV__nc|ENSG00000171634|Q12830-4|BPTF	REV__nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	637.3687133789062	2	637.372404	1272.73025	0.93682	0.0005971	-3.9711	-0.002531	-3.0342	-0.0019339	637.3697894840569	105.65	2.5352	105.76	104.94	107.48	0.10766					185	62	4	0	0	0	0.7342	1	11257	11257		25.574	2.0514	1	2641200	+		13753	21757	9441	9450	15844	15844					0.10479858962685284
GYPHLIKISVF	11	Unmodified	_GYPHLIKISVF_					0	0	0			REV__ENST00000493442.1_1_X:103434464-103434566:+|nuORF	REV__ENST00000493442.1_1_X:103434464-103434566:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	637.3687133789062	2	637.368798	1272.72304	0.93683	0.0005971	1.6855	0.0010743	2.6223	0.0016714	637.3697894840569	105.65	2.5352	105.76	104.94	107.48	0.10766					185	62	4	0	0	0	0.73893	1	11246	11246		24.519	0.28737	1	2641200	+		13754	27693	9442	9451	15845	15845					0.09759126362246207
GYPKHIKE	8	Unmodified	_GYPKHIKE_					0	0	0		ENSG00000157227|ENST00000311852|MMP14	ENSG00000157227|ENST00000311852|MMP14	ENSG00000157227|ENST00000311852|MMP14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.26702880859375	2	486.269084	970.523616	-1.0938	-0.00053186	-2.8649	-0.0013931	-3.9586	-0.0019249	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.884	1	8905	8905		33.516	1.5607	1	1852700			13755	5418	9443	9452	15846	15846					0.0371749113437545
GYPRLALAQ	9	Unmodified	_GYPRLALAQ_					0	0	0		ENST00000546536.5_1_14:105957646-105963882:+|nuORF;nc|ENSG00000185347|Q86SX3-5|TEDC1;nc|ENSG00000185347|Q86SX3-3|TEDC1;nc|ENSG00000185347|Q86SX3-2|TEDC1;nc|ENSG00000185347|Q86SX3-6|TEDC1;ENSG00000185347|ENST00000392523|TEDC1	ENST00000546536.5_1_14:105957646-105963882:+|nuORF	ENST00000546536.5_1_14:105957646-105963882:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7802429199219	2	494.782359	987.550165	-1.4939	-0.00073914	-2.7072	-0.0013395	-4.2011	-0.0020786	494.78084579093485	83.794	2.8854	83.932	82.379	85.265	0.13811					127	66	3	0	0	0	0.78536	1	8093	8093		29.15	2.4566	1	242900			13756	7704	9444	9453	15847	15847					0.0558918002569726
GYPYQALVL	9	Unmodified	_GYPYQALVL_					0	0	0			REV__ENST00000310127.10_1_19:1806674-1809663:-|nuORF	REV__ENST00000310127.10_1_19:1806674-1809663:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2826538085938	2	512.279118	1022.54368	-0.052063	-2.6671E-05	4.432	0.0022704	4.3799	0.0022437	512.2812910993212	86.454	3.487	86.521	85.51	88.997	0.067436					149	81	2	0	0	0	0.67235	1	8713	8713		42.474	5.3154	1	329990	+		13757	24883	9445	9454	15848	15848					0.033312420743072835
GYQFLGVLL	9	Unmodified	_GYQFLGVLL_					0	0	0			REV__ENSG00000187080|ENST00000366480|OR2AK2	REV__ENSG00000187080|ENST00000366480|OR2AK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.2913513183594	2	505.289485	1008.56442	2.3779	0.0012015	1.554	0.00078521	3.9319	0.0019867	505.29016362201537	97.35	2.1515	97.295	96.802	98.953	-0.055542					137	49	4	0	0	0	0.7932	1	10447	10447		24.203	2.2429	1	1240400	+		13758	22900	9446	9455	15849	15849					0.06047832454021318
GYQFLGVLLF	10	Unmodified	_GYQFLGVLLF_					0	0	0			REV__ENSG00000187080|ENST00000366480|OR2AK2	REV__ENSG00000187080|ENST00000366480|OR2AK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.8274536132812	2	578.823692	1155.63283	-0.9321	-0.00053952	3.2285	0.0018687	2.2964	0.0013292	578.8254397838805	65.358	0.41475	65.362	65.139	65.554	0.0046997					31	18	2	0	0	0	0.86305	1	6135	6135		31.955	4.0726	1	350700	+		13759	22900	9447	9456	15850	15850					0.06124077033859976
GYQRQLTYK	9	Unmodified	_GYQRQLTYK_					0	0	0		nc|ENSG00000160111|Q8IZJ3-2|CPAMD8;ENSG00000160111|ENST00000443236|CPAMD8	nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	578.8084716796875	2	578.809105	1155.60366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.58	1	110.7	110.2	111.2	0.11659								0	0	0	0.29134	1	11906	11906		34.173	1.3601	1				13760	5554	9448	9457	15851	15851					0.03207932737564079
GYRINRKR	8	Unmodified	_GYRINRKR_					0	0	0			REV__ENSG00000179163|ENST00000374479|FUCA1	REV__ENSG00000179163|ENST00000374479|FUCA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8168334960938	2	531.817599	1061.62064	1.1723	0.00062347	-2.558	-0.0013604	-1.3857	-0.00073692	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.86288	1	9065	9065		26.796	1.3459	1	4413000	+		13761	22321	9449	9458	15852	15852					0.09229898134049108
GYRINRLKN	9	Unmodified	_GYRINRLKN_					0	0	0			REV__ENSG00000197601|ENST00000354817|FAR1	REV__ENSG00000197601|ENST00000354817|FAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3290405273438	2	567.330539	1132.64652	0.4851	0.00027521	-1.8618	-0.0010563	-1.3767	-0.00078107	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.7932	1	9764	9764		24.203	0.68005	1	18558000	+		13762	23251	9450	9459	15853	15853					0.0855074758567298
GYRKIIILS	9	Unmodified	_GYRKIIILS_					0	0	0			REV__ENST00000569950.1_1_16:46715399-46723351:-|nuORF	REV__ENST00000569950.1_1_16:46715399-46723351:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8167724609375	2	531.837134	1061.65972	0.71853	0.00038214	0.13835	7.3581E-05	0.85688	0.00045572	532.3394059764836	87.97	0.12955	88.12	88.028	88.157	0.15018					4	2	2	0	0	0	0.20789	1	8707	8707		17.365	0	1	25824	+		13763	28918	9451	9460	15854	15854					0.13135185645046477
GYRMSLVKRR	10	Unmodified	_GYRMSLVKRR_					0	0	0		nc|ENSG00000130475|O14526-2|FCHO1;chr19:17787846-17788270|61|19.98|0.52|5.27|+|ENST00000594202|FCHO1,FCHO1;nc|ENSG00000130475|O14526-3|FCHO1;ENSG00000130475|ENST00000596536|FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3690795898438	2	633.366598	1264.71864	-0.11908	-7.5423E-05	4.2509	0.0026924	4.1318	0.0026169	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.80179	1	9555	9555		39.253	6.4404	1	2722900			13764	267	9452	9461	15855	15855					0.096873386677089
GYRMSLVKRR	10	Unmodified	_GYRMSLVKRR_					0	0	0		nc|ENSG00000130475|O14526-2|FCHO1;chr19:17787846-17788270|61|19.98|0.52|5.27|+|ENST00000594202|FCHO1,FCHO1;nc|ENSG00000130475|O14526-3|FCHO1;ENSG00000130475|ENST00000596536|FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.58184814453125	3	422.580158	1264.71864	2.9692	0.0012547	1.3166	0.00055636	4.2858	0.0018111	422.58062707178027	97.728	3.629	97.776	96.312	99.941	0.048164					208	84	4	0	0	0	0.86338	1	10416	10416		31.634	3.0575	1	464700			13765	267	9452	9461	15856	15856					0.096873386677089
GYRMSLVKRR	10	Unmodified	_GYRMSLVKRR_					0	0	0		nc|ENSG00000130475|O14526-2|FCHO1;chr19:17787846-17788270|61|19.98|0.52|5.27|+|ENST00000594202|FCHO1,FCHO1;nc|ENSG00000130475|O14526-3|FCHO1;ENSG00000130475|ENST00000596536|FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3690185546875	2	633.366598	1264.71864	1.4714	0.00093196	2.5393	0.0016083	4.0108	0.0025403	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.86647	2	10073	10073;10109		30.318	12.056	1	11430000			13766	267	9452	9461	15857;15858	15857					0.096873386677089
GYRMSLVKRR	10	Unmodified	_GYRMSLVKRR_					0	0	0		nc|ENSG00000130475|O14526-2|FCHO1;chr19:17787846-17788270|61|19.98|0.52|5.27|+|ENST00000594202|FCHO1,FCHO1;nc|ENSG00000130475|O14526-3|FCHO1;ENSG00000130475|ENST00000596536|FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3689575195312	2	633.366598	1264.71864	2.3091	0.0014625	1.6884	0.0010694	3.9975	0.0025319	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.86089	3	11856	11736;11748;11856		44.377	14.059	1	10333000			13767	267	9452	9461	15859;15860;15861	15861					0.096873386677089
GYRRGAKKLE	10	Unmodified	_GYRRGAKKLE_					0	0	0		nc|ENSG00000012048|P38398-8|BRCA1;chr17:43124115-43125277|50|10.88|0.46|4.57|-|ENST00000652672|BRCA1,BRCA1;chr17:43094860-43099775|54|10.19|0.46|4.45|-|ENST00000634433|BRCA1,BRCA1;nc|ENSG00000012048|P38398-4|BRCA1;ENSG00000012048|ENST00000357654|BRCA1;nc|ENSG00000012048|P38398-7|BRCA1	nc|ENSG00000012048|P38398-8|BRCA1	nc|ENSG00000012048|P38398-8|BRCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3432006835938	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86218	1	9928	9928		32.812	0	1	17904000			13768	228	9453	9462	15862	15862					0.09147016757151505
GYRVRQKDLG	10	Unmodified	_GYRVRQKDLG_					0	0	0		ENSG00000181626|ENST00000587848|ANKRD62	ENSG00000181626|ENST00000587848|ANKRD62	ENSG00000181626|ENST00000587848|ANKRD62	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3329467773438	2	596.333279	1190.652	-0.57959	-0.00034563	-0.049534	-2.9539E-05	-0.62912	-0.00037517	596.3331084008277	96.35	3.5496	96.416	95.306	98.855	0.06591					255	82	4	0	0	0	0.86218	1	10174	10174		32.812	0	1	1242500			13769	7396	9454	9463	15863	15863					0.06430426377460208
GYRWKISVF	9	Unmodified	_GYRWKISVF_					0	0	0		nc|ENSG00000285891|A0A3B3IT52|MSANTD5	nc|ENSG00000285891|A0A3B3IT52|MSANTD5	nc|ENSG00000285891|A0A3B3IT52|MSANTD5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3201293945312	2	578.319109	1154.62366	-0.45444	-0.00026281	3.341	0.0019322	2.8865	0.0016693	578.3212868289457	92.787	2.7225	92.787	91.761	94.484	0					150	62	3	0	0	0	0.78058	1	9154	9154		30.504	3.4563	1	310260			13770	15331	9455	9464	15864	15864					0.05253728468187546
GYRWKISVF	9	Unmodified	_GYRWKISVF_					0	0	0		nc|ENSG00000285891|A0A3B3IT52|MSANTD5	nc|ENSG00000285891|A0A3B3IT52|MSANTD5	nc|ENSG00000285891|A0A3B3IT52|MSANTD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	578.3197021484375	2	578.319109	1154.62366	0.64624	0.00037373	1.9523	0.001129	2.5985	0.0015028	578.3204084771725	92.382	2.6482	92.604	91.342	93.99	0.2224					164	62	3	0	0	0	0.74721	1	9278	9278		37.159	0.71236	1	566890			13771	15331	9455	9464	15865	15865					0.05253728468187546
GYSAKVVLLLG	11	Unmodified	_GYSAKVVLLLG_					0	0	0			REV__ENSG00000119457|ENST00000374228|SLC46A2	REV__ENSG00000119457|ENST00000374228|SLC46A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3401489257812	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.73893	2	12201	12201;12213		24.519	3.0409	1	4071000	+		13772	18353	9456	9465	15866;15867	15866					0.11535748579603933
GYSDKESQNH	10	Unmodified	_GYSDKESQNH_					0	0	0			REV__nc|ENSG00000089472|Q9BQS7-2|HEPH	REV__nc|ENSG00000089472|Q9BQS7-2|HEPH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.7507934570312	2	582.749441	1163.48433	-1.4231	-0.00082933	1.3946	0.00081272	-0.028498	-1.6607E-05	582.7501639764592	24.847	0.39258	24.847	24.673	25.066	0					28	17	2	0	0	0	0.86106	1	875	875		33.922	5.8401	1	64641	+		13773	16970	9457	9466	15868	15868					-0.0908730567780367
GYSHSVKRGV	10	Unmodified	_GYSHSVKRGV_					0	0	0			REV__ENSG00000140564|ENST00000268171|FURIN	REV__ENSG00000140564|ENST00000268171|FURIN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3170166015625	2	545.293622	1088.57269	2.2693	0.0012375	3.8399	0.0020939	6.1092	0.0033313	545.2960970509422	91.063	0.27658	90.996	90.879	91.155	-0.067093					12	6	3	0	0	0	0.37624	1	9575	9575		32.812	17.171	1	134200	+		13774	19632	9458	9467	15869	15869					0.03194779423347427
GYSKILPSLIS	11	Unmodified	_GYSKILPSLIS_					0	0	0		ENSG00000162779|ENST00000367618|AXDND1	ENSG00000162779|ENST00000367618|AXDND1	ENSG00000162779|ENST00000367618|AXDND1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427124023438	2	589.344989	1176.67542	0.83312	0.00049099	-4.3931	-0.002589	-3.5599	-0.002098	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.58425	1	9715	9715		45.972	6.7194	1	20363000			13775	5737	9459	9468	15870	15870					0.09415427371459373
GYSKILPSLIS	11	Unmodified	_GYSKILPSLIS_					0	0	0		ENSG00000162779|ENST00000367618|AXDND1	ENSG00000162779|ENST00000367618|AXDND1	ENSG00000162779|ENST00000367618|AXDND1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3427734375	2	589.344989	1176.67542	0.82336	0.00048524	-4.2828	-0.002524	-3.4594	-0.0020388	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.69995	1	11296	11296		31.53	1.2121	1	9460500			13776	5737	9459	9468	15871	15871					0.09415427371459373
GYSKLRVIL	9	Unmodified	_GYSKLRVIL_					0	0	0		ENSG00000279804|ENST00000624297|PRAMEF18	ENSG00000279804|ENST00000624297|PRAMEF18	ENSG00000279804|ENST00000624297|PRAMEF18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.826904296875	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.77696	1	10623	10623		31.53	5.9558	1	23918000			13777	9047	9460	9469	15872	15872					0.12214899128002799
GYSLKLSKLK	10	Unmodified	_GYSLKLSKLK_					0	0	0		nc|ENSG00000026751|Q9NQ25-4|SLAMF7;nc|ENSG00000026751|Q9NQ25-6|SLAMF7;nc|ENSG00000026751|Q9NQ25-5|SLAMF7;nc|ENSG00000026751|Q9NQ25-3|SLAMF7;ENSG00000026751|ENST00000368043|SLAMF7	nc|ENSG00000026751|Q9NQ25-4|SLAMF7	nc|ENSG00000026751|Q9NQ25-4|SLAMF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.85400390625	2	568.855524	1135.69649	-1.3907	-0.00079112	-2.9165	-0.001659	-4.3072	-0.0024502	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.86218	1	10862	10862		32.812	6.1195	1	72465000			13778	871	9461	9470	15873	15873					0.13407437470914374
GYSLKVKGRR	10	Unmodified	_GYSLKVKGRR_					0	0	0		ENST00000424075.2_1_12:133464508-133464905:+|nuORF	ENST00000424075.2_1_12:133464508-133464905:+|nuORF	ENST00000424075.2_1_12:133464508-133464905:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3539428710938	2	582.354014	1162.69348	3.1803	0.0018521	-4.2471	-0.0024733	-1.0667	-0.00062122	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.86218	1	11366	11366		32.812	4.9302	1	77008000			13779	11508	9462	9471	15874	15874					0.11863607136797327
GYSLKVKGRR	10	Unmodified	_GYSLKVKGRR_					0	0	0		ENST00000424075.2_1_12:133464508-133464905:+|nuORF	ENST00000424075.2_1_12:133464508-133464905:+|nuORF	ENST00000424075.2_1_12:133464508-133464905:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3536987304688	2	582.354014	1162.69348	0.88325	0.00051437	-1.8039	-0.0010505	-0.92067	-0.00053616	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.8608	1	11124	11124		34.173	1.3601	1	125340000			13780	11508	9462	9471	15875	15875					0.11863607136797327
GYSLKVKGRR	10	Unmodified	_GYSLKVKGRR_					0	0	0		ENST00000424075.2_1_12:133464508-133464905:+|nuORF	ENST00000424075.2_1_12:133464508-133464905:+|nuORF	ENST00000424075.2_1_12:133464508-133464905:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.35302734375	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.85466	3	12585	12250;12461;12585		26.693	6.1948	1	3937500			13781	11508	9462	9471	15876;15877;15878	15878					0.11863607136797327
GYSLLTAVMLL	11	Unmodified	_GYSLLTAVMLL_					0	0	0			REV__ENSG00000180777|ENST00000690538|ANKRD30B	REV__ENSG00000180777|ENST00000690538|ANKRD30B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8668823242188	2	590.835942	1179.65733	0.89118	0.00052654	2.4456	0.0014449	3.3367	0.0019715	590.837916154834	103.75	0.28719	103.87	103.74	104.03	0.11685					13	6	3	0	0	0	0.17478	1	10979	10979		49.442	1.7842	1	126040	+		13782	22416	9463	9472	15879	15879					0.07468969125056901
GYSLLTGYVF	10	Unmodified	_GYSLLTGYVF_					0	0	0		ENSG00000100926|ENST00000261789|TM9SF1	ENSG00000100926|ENST00000261789|TM9SF1	ENSG00000100926|ENST00000261789|TM9SF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3404541015625	2	560.289682	1118.56481	-1.4187	-0.0007949	4.2913	0.0024044	2.8726	0.0016095	560.2921477607568	102.18	0.11437	102.32	102.26	102.37	0.13569					4	2	2	0	0	0	0.37624	1	10687	10687		45.952	9.5052	1	326500			13783	1885	9464	9473	15880	15880					0.010272073831856687
GYSPWGPGG	9	Unmodified	_GYSPWGPGG_					0	0	0			REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	439.18841552734375	2	439.195585	876.376617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.143	1	78.199	77.699	78.699	0.056114								0	0	0	0.29299	1	7579	7579		33.516	1.5607	1		+		13784	18513	9465	9474	15881	15881					-0.0665160575056234
GYTCDCFD	8	Unmodified	_GYTCDCFD_					0	0	0		nc|ENSG00000049323|Q14766-3|LTBP1;nc|ENSG00000049323|Q14766-2|LTBP1;nc|ENSG00000049323|Q14766-5|LTBP1;ENSG00000049323|ENST00000404816|LTBP1;nc|ENSG00000049323|Q14766-4|LTBP1	nc|ENSG00000049323|Q14766-3|LTBP1	nc|ENSG00000049323|Q14766-3|LTBP1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	462.14910888671875	2	462.149129	922.283704	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.965	1	71.042	70.542	71.542	0.076225								0	0	0	0.30125	1	6427	6427		20.482	5.617	1				13785	985	9466	9475	15882	15882					-0.18054614590471374
GYTDRGLFVK	10	Unmodified	_GYTDRGLFVK_					0	0	0			REV__nc|ENSG00000070669|P08243-3|ASNS	REV__nc|ENSG00000070669|P08243-3|ASNS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3104858398438	2	578.31148	1154.60841	-0.93812	-0.00054253	-0.66211	-0.00038291	-1.6002	-0.00092543	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.70553	1	12054	12054		44.377	10.456	1	3649700	+		13786	16608	9467	9476	15883	15883					0.03728816880334307
GYTGQPPK	8	Unmodified	_GYTGQPPK_					0	0	0			REV__ENSG00000105997|ENST00000612286|HOXA3	REV__ENSG00000105997|ENST00000612286|HOXA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.2190856933594	2	424.21906	846.423567	2.5012	0.0010611	-3.4581	-0.001467	-0.95693	-0.00040595	424.2174916440496	100.89	0.85032	101.24	100.69	101.54	0.34591					53	21	4	0	0	0	0.88601	1	12261	12261		34.173	3.6689	1	1130200	+		13787	17591	9468	9477	15884	15884					-0.005787461994259502
GYTISVVI	8	Unmodified	_GYTISVVI_					0	0	0			REV__ENSG00000184954|ENST00000327335|OR6C70	REV__ENSG00000184954|ENST00000327335|OR6C70	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.245849609375	2	426.247286	850.48002	0.55578	0.0002369	-3.442	-0.0014671	-2.8862	-0.0012302	426.24575751127946	87.37	3.4516	87.816	85.746	89.198	0.44628					161	83	2	0	0	0	0.82464	1	10280	10280		21.702	0	1	2779100	+		13788	22715	9469	9478	15885	15885					0.04879881637236849
GYTSGTSKPG	10	Unmodified	_GYTSGTSKPG_					0	0	0			REV__ENSG00000171467|ENST00000361428|ZNF318	REV__ENSG00000171467|ENST00000361428|ZNF318	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.72857666015625	2	477.729989	953.445425	-1.6875	-0.00080617	-1.3287	-0.00063477	-3.0162	-0.0014409	477.72916912562187	95.352	0.78807	95.555	95.232	96.02	0.20242					42	18	3	0	0	0	0.80179	1	9725	9725		39.253	5.0803	1	640610	+		13789	21733	9470	9479	15886	15886					-0.03315986241511837
GYTSGTSKPG	10	Unmodified	_GYTSGTSKPG_					0	0	0			REV__ENSG00000171467|ENST00000361428|ZNF318	REV__ENSG00000171467|ENST00000361428|ZNF318	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	477.729989	953.445425	-0.83757	-0.00040013	-2.4344	-0.001163	-3.272	-0.0015631	477.72870547113666	95.213	0.82064	95.444	95.108	95.928	0.23103	-0.043021	0.00045776	NaN	39.253	45	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	663550	+		13790	21733	9470	9479							-0.03315986241511837
GYVHAEWAL	9	Unmodified	_GYVHAEWAL_					0	0	0			REV__ENSG00000224940|ENST00000446477|PRRT4	REV__ENSG00000224940|ENST00000446477|PRRT4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.258717	1044.50288	-0.041394	-2.166E-05	-1.7396	-0.00091025	-1.781	-0.00093191	523.2577456557443	88.894	0.20721	88.962	88.833	89.04	0.068161					6	4	2	0	0	0	0.20789	1	9058	9058		31.955	2.8053	1	33437	+		13791	23735	9471	9480	15887	15887					-0.017590992453051513
GYVKKLQRR	9	Unmodified	_GYVKKLQRR_					0	0	0		ENSG00000197889|ENST00000407572|MEIG1	ENSG00000197889|ENST00000407572|MEIG1	ENSG00000197889|ENST00000407572|MEIG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.356689453125	2	574.356557	1146.69856	1.1071	0.0006359	-2.2805	-0.0013098	-1.1733	-0.0006739	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.78983	1	10776	10776		27.882	1.8189	1	708140			13792	8209	9472	9481	15888	15888					0.13107910999428896
GYVKLPKR	8	Unmodified	_GYVKLPKR_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8012390136719	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.86791	1	9609	9609		28.254	4.0515	1	7439400	+		13793	16914	9473	9482	15889	15889					0.1102236078503438
GYVLGGQLLTI	11	Unmodified	_GYVLGGQLLTI_					0	0	0		ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3297729492188	2	567.331882	1132.64921	-1.2007	-0.00068122	-1.9524	-0.0011076	-3.1531	-0.0017889	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.68532	1	9220	9220		33.922	1.1092	1	5763000			13794	6900	9474	9483	15890	15890					0.0881915819995811
GYVLGGQLLTI	11	Unmodified	_GYVLGGQLLTI_					0	0	0		ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3297119140625	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.68532	1	9621	9621		33.922	1.1711	1	15673000			13795	6900	9474	9483	15891	15891					0.0881915819995811
GYVLGGQLLTI	11	Unmodified	_GYVLGGQLLTI_					0	0	0		ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.68532	3	9340	9340;9461;9545		33.922	4.8683	1	18558000			13796	6900	9474	9483	15892;15893;15894	15892					0.0881915819995811
GYVLGGQLLTI	11	Unmodified	_GYVLGGQLLTI_					0	0	0		ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3300170898438	2	567.331882	1132.64921	0.77491	0.00043963	-4.0071	-0.0022734	-3.2322	-0.0018337	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.7144	1	9092	9092		29.17	1.0886	1	6344600			13797	6900	9474	9483	15895	15895					0.0881915819995811
GYVLGGQLLTI	11	Unmodified	_GYVLGGQLLTI_					0	0	0		ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3294067382812	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.66929	2	9370	9370;9501		36.447	3.6343	1	17338000			13798	6900	9474	9483	15896;15897	15896					0.0881915819995811
GYVLGGQLLTI	11	Unmodified	_GYVLGGQLLTI_					0	0	0		ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3298950195312	2	567.331882	1132.64921	-0.50942	-0.00028901	-1.8517	-0.0010506	-2.3612	-0.0013396	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.69248	1	10894	10894		32.751	2.2469	1	5685000			13799	6900	9474	9483	15898	15898					0.0881915819995811
GYVLGGQLLTI	11	Unmodified	_GYVLGGQLLTI_					0	0	0		ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3302612304688	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.7144	1	10965	10965		29.17	1.2878	1	6007000			13800	6900	9474	9483	15899	15899					0.0881915819995811
GYVLTYLLVG	10	Unmodified	_GYVLTYLLVG_					0	0	0			REV__ENSG00000074590|ENST00000261402|NUAK1	REV__ENSG00000074590|ENST00000261402|NUAK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.3193969726562	2	549.3157	1096.61685	-0.54476	-0.00029924	4.1359	0.0022719	3.5911	0.0019727	549.3179138519522	101.15	1.9875	101.19	100.7	102.69	0.031036					127	47	4	0	0	0	0.86305	1	10751	10751		31.955	5.2619	1	2171100	+		13801	16692	9475	9484	15900	15900					0.07240370796921525
GYVQRKRR	8	Unmodified	_GYVQRKRR_					0	0	0			REV__ENSG00000146250|ENST00000369700|PRSS35	REV__ENSG00000146250|ENST00000369700|PRSS35	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8167114257812	2	531.817599	1061.62064	-0.033042	-1.7573E-05	-1.3513	-0.00071863	-1.3843	-0.0007362	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.884	1	9047	9047		33.516	0	1	4208000	+		13802	20001	9476	9485	15901	15901					0.09229898134049108
GYVQRKRR	8	Unmodified	_GYVQRKRR_					0	0	0			REV__ENSG00000146250|ENST00000369700|PRSS35	REV__ENSG00000146250|ENST00000369700|PRSS35	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8168334960938	2	531.817599	1061.62064	1.1723	0.00062347	-2.558	-0.0013604	-1.3857	-0.00073692	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.90465	1	9209	9209		40.573	4.9543	1	4413000	+		13803	20001	9476	9485	15902	15902					0.09229898134049108
GYVQRKRR	8	Unmodified	_GYVQRKRR_					0	0	0			REV__ENSG00000146250|ENST00000369700|PRSS35	REV__ENSG00000146250|ENST00000369700|PRSS35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8169555664062	2	531.817599	1061.62064	-0.04786	-2.5453E-05	-1.4751	-0.00078448	-1.523	-0.00080994	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.884	1	8854	8854		33.516	3.1979	1	4916300	+		13804	20001	9476	9485	15903	15903					0.09229898134049108
GYVQRKRR	8	Unmodified	_GYVQRKRR_					0	0	0			REV__ENSG00000146250|ENST00000369700|PRSS35	REV__ENSG00000146250|ENST00000369700|PRSS35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8164672851562	2	531.817599	1061.62064	0.70533	0.00037511	-2.1628	-0.0011502	-1.4575	-0.00077513	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.85277	1	8482	8482		25.45	1.2474	1	1163300	+		13805	20001	9476	9485	15904	15904					0.09229898134049108
GYVQRKRR	8	Unmodified	_GYVQRKRR_					0	0	0			REV__ENSG00000146250|ENST00000369700|PRSS35	REV__ENSG00000146250|ENST00000369700|PRSS35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8169555664062	2	531.817599	1061.62064	0.7269	0.00038658	-2.1356	-0.0011358	-1.4087	-0.00074918	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.85277	3	8719	8719;8780;8959		26.796	6.3143	1	4496300	+		13806	20001	9476	9485	15905;15906;15907	15905					0.09229898134049108
GYVQRKRR	8	Unmodified	_GYVQRKRR_					0	0	0			REV__ENSG00000146250|ENST00000369700|PRSS35	REV__ENSG00000146250|ENST00000369700|PRSS35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8169555664062	2	531.817599	1061.62064	-1.5109	-0.00080353	0.089216	4.7447E-05	-1.4217	-0.00075608	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.884	1	8865	8865		33.516	4.366	1	4022300	+		13807	20001	9476	9485	15908	15908					0.09229898134049108
GYVQRKRR	8	Unmodified	_GYVQRKRR_					0	0	0			REV__ENSG00000146250|ENST00000369700|PRSS35	REV__ENSG00000146250|ENST00000369700|PRSS35	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8169555664062	2	531.817599	1061.62064	-1.264	-0.00067223	-0.0037545	-1.9967E-06	-1.2678	-0.00067423	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.884	1	10535	10535		33.516	1.9858	1	4586300	+		13808	20001	9476	9485	15909	15909					0.09229898134049108
GYVRGLSK	8	Unmodified	_GYVRGLSK_					0	0	0			REV__ENSG00000112293|ENST00000230036|GPLD1	REV__ENSG00000112293|ENST00000230036|GPLD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.2561340332031	2	440.255977	878.497401	-1.5773	-0.00069443	0.16411	7.2252E-05	-1.4132	-0.00062218	440.2558864643056	60.863	0.38903	60.863	60.685	61.074	0					27	17	2	0	0	0	0.82658	1	5327	5327		21.96	0	1	64382	+		13809	17937	9477	9486	15910	15910					0.053292219629156534
GYVRGLSK	8	Unmodified	_GYVRGLSK_					0	0	0			REV__ENSG00000112293|ENST00000230036|GPLD1	REV__ENSG00000112293|ENST00000230036|GPLD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2552490234375	2	440.255977	878.497401	-1.4995	-0.00066014	-0.016865	-7.4251E-06	-1.5163	-0.00066757	440.2559096543124	60.596	0.55002	60.697	60.508	61.058	0.10082					39	23	2	0	0	0	0.85277	1	5268	5268		25.45	1.2474	1	235130	+		13810	17937	9477	9486	15911	15911					0.053292219629156534
GYVSRGGIRR	10	Unmodified	_GYVSRGGIRR_					0	0	0		CON__P17690	CON__P17690	CON__P17690	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8200073242188	2	560.820338	1119.62612	-0.54677	-0.00030664	-0.43561	-0.0002443	-0.98237	-0.00055094	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.86218	1	9093	9093		32.812	6.1195	1	408930		+	13811	594	9478	9487	15912	15912					0.07109576925859074
GYYGKVTGSAS	11	Unmodified	_GYYGKVTGSAS_					0	0	0		ENSG00000101680|ENST00000389658|LAMA1;ENST00000579014.5_1_18:6942080-7042306:-|nuORF	ENSG00000101680|ENST00000389658|LAMA1	ENSG00000101680|ENST00000389658|LAMA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3168334960938	2	545.264196	1088.51384	0.15185	8.2798E-05	-3.4518	-0.0018821	-3.2999	-0.0017993	545.2617938734495	90.405	0.23618	90.623	90.551	90.787	0.21736					6	5	2	0	0	0	0.17574	1	9082	9082		41.427	17.904	1	26399			13812	1955	9479	9488	15913	15913					-0.026877416616798655
GYYGTHHTDL	10	Unmodified	_GYYGTHHTDL_					0	0	0		ENST00000372899.5_1_6:42643825-42644554:+|nuORF	ENST00000372899.5_1_6:42643825-42644554:+|nuORF	ENST00000372899.5_1_6:42643825-42644554:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3538818359375	2	582.259445	1162.50434	-1.3473	-0.00078447	3.1579	0.0018387	1.8106	0.0010543	582.2613207817272	103.43	0.50857	103.54	103.46	103.97	0.11495					17	12	2	0	0	0	0.37624	1	10919	10919		45.952	10.334	1	158290			13813	10722	9480	9489	15914	15914					-0.07041509947180202
GYYLFAFHLL	10	Unmodified	_GYYLFAFHLL_					0	0	0			REV__chr2:189088772-189089872|16|51.81|0.05|9.92|-|2|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|28	REV__chr2:189088772-189089872|16|51.81|0.05|9.92|-|2|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	622.3365478515625	2	622.329142	1242.64373	6.2897	0.0039143	4.2355	0.0026358	10.525	0.0065501	622.3315163945003	110.19	0.41081	110.25	110.08	110.49	0.068001					25	11	3	0	0	0	0.85976	1	13379	13379		35.201	6.0307	1	599590	+		13814	15745	9481	9490	15915	15915					0.032114794081280706
GYYTPTPT	8	Unmodified	_GYYTPTPT_					0	0	0			REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2744140625	2	450.210901	898.407249	1.6798	0.00075625	2.2244	0.0010015	3.9042	0.0017577	450.21176033657804	92.897	0.1649	92.835	92.763	92.928	-0.06144					5	3	2	0	0	0	0.4196	1	9832	9832		44.531	11.015	1	36462	+		13815	17805	9482	9491	15916	15916					-0.04601872156206355
HAAAPPPSAL	10	Unmodified	_HAAAPPPSAL_					0	0	0			REV__ENST00000576444.1_2_17:1959720-1959852:+|nuORF	REV__ENST00000576444.1_2_17:1959720-1959852:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.25286865234375	2	466.253434	930.492316	-0.068934	-3.2141E-05	1.5407	0.00071835	1.4718	0.00068621	466.25405568860674	62.979	1.1346	62.945	62.242	63.376	-0.033714					88	53	2	0	0	0	0.86482	1	5974	5974		25.45	1.2474	1	153380	+		13816	28995	9483	9492	15917	15917					0.024289181002814075
HAAAVRLA	8	Unmodified	_HAAAVRLA_					0	0	0			REV__ENSG00000123453|ENST00000439388|SARDH	REV__ENSG00000123453|ENST00000439388|SARDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.7435302734375	2	404.743037	807.471521	2.6141	0.001058	-0.64894	-0.00026265	1.9652	0.0007954	404.7427109937438	98.07	0.90294	98.455	98.057	98.96	0.38548					31	21	2	0	0	0	0.81548	1	11804	11804		20.482	0	1	376580	+		13817	18543	9484	9493	15918	15918					0.060083725112690445
HAAAVRLA	8	Unmodified	_HAAAVRLA_					0	0	0			REV__ENSG00000123453|ENST00000439388|SARDH	REV__ENSG00000123453|ENST00000439388|SARDH	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	404.743037	807.471521	-0.18634	-7.5421E-05	-0.61989	-0.00025089	-0.80623	-0.00032632	404.7438420715512	98.214	0.74274	98.271	97.88	98.623	0.056831	0.12375	-0.00060823	NaN	20.482	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71777	+		13818	18543	9484	9493							0.060083725112690445
HAAAVRLA	8	Unmodified	_HAAAVRLA_					0	0	0			REV__ENSG00000123453|ENST00000439388|SARDH	REV__ENSG00000123453|ENST00000439388|SARDH	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	404.743037	807.471521	-1.7965	-0.00072712	1.2937	0.00052363	-0.50276	-0.00020349	404.7446231108813	97.716	0.7799	97.944	97.611	98.391	0.22787	-0.20359	0.00094082	NaN	20.482	23	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77136	+		13819	18543	9484	9493							0.060083725112690445
HAAAVRLA	8	Unmodified	_HAAAVRLA_					0	0	0			REV__ENSG00000123453|ENST00000439388|SARDH	REV__ENSG00000123453|ENST00000439388|SARDH	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	404.743037	807.471521	0.70796	0.00028654	1.0815	0.00043772	1.7894	0.00072427	404.74361687917974	97.868	0.65843	98.029	97.71	98.369	0.16074	-0.11818	0.00076901	NaN	20.482	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55080	+		13820	18543	9484	9493							0.060083725112690445
HAAAVRLA	8	Unmodified	_HAAAVRLA_					0	0	0			REV__ENSG00000123453|ENST00000439388|SARDH	REV__ENSG00000123453|ENST00000439388|SARDH	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	404.743037	807.471521	-1.9288	-0.00078068	2.5756	0.0010425	0.64681	0.00026179	404.7445956539809	97.841	0.52927	98.037	97.847	98.377	0.19585	-0.11007	0.0019785	NaN	20.482	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46303	+		13821	18543	9484	9493							0.060083725112690445
HAAAVRLA	8	Unmodified	_HAAAVRLA_					0	0	0			REV__ENSG00000123453|ENST00000439388|SARDH	REV__ENSG00000123453|ENST00000439388|SARDH	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	404.743037	807.471521	2.6141	0.001058	-0.64894	-0.00026265	1.9652	0.0007954	404.7427109937438	98.07	0.90294	98.455	98.057	98.96	0.38548	0.30809	-0.00063175	NaN	20.482	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	376580	+		13822	18543	9484	9493							0.060083725112690445
HAAINQGQ	8	Unmodified	_HAAINQGQ_					0	0	0		ENSG00000108839|ENST00000251535|ALOX12	ENSG00000108839|ENST00000251535|ALOX12	ENSG00000108839|ENST00000251535|ALOX12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.5994873046875	2	419.711934	837.409314	1.9626	0.00082371	3.2643	0.0013701	5.2269	0.0021938	419.7114356896824	24.529	0.22021	24.015	23.924	24.144	-0.51365					6	4	2	0	0	0	0.4196	1	1190	1190		25.45	21.465	1	15121			13823	2434	9485	9494	15919	15919					-0.015893986276978467
HAALSAPLPAP	11	Unmodified	_HAALSAPLPAP_					0	0	0		ENSG00000107281|ENST00000371601|NPDC1;ENST00000496498.1_1_9:139934226-139934605:-|nuORF	ENSG00000107281|ENST00000371601|NPDC1	ENSG00000107281|ENST00000371601|NPDC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.8116455078125	2	522.795466	1043.57638	0.25678	0.00013425	-0.52368	-0.00027378	-0.26689	-0.00013953	522.795080477085	30.829	0.47891	30.832	30.579	31.058	0.0037212					17	10	2	0	0	0	0.17289	1	2044	2044		15.642	0	1	108880			13824	2340	9486	9495	15920	15920					0.056334491971938405
HAAPDDTI	8	Unmodified	_HAAPDDTI_					0	0	0			REV__ENST00000223129.8_1_7:7680585-7680732:-|nuORF	REV__ENST00000223129.8_1_7:7680585-7680732:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.7185974121094	2	420.198325	838.382096	-1.8578	-0.00078066	-0.62783	-0.00026381	-2.4857	-0.0010445	420.1972297133696	43.66	0.19814	43.668	43.562	43.76	0.0084534					5	4	2	0	0	0	0.4196	1	3015	3015		29.842	6.7991	1	25410	+		13825	24169	9487	9496	15921	15921					-0.04355926958760392
HAAPKPAI	8	Unmodified	_HAAPKPAI_					0	0	0			REV__ENSG00000101544|ENST00000262198|ADNP2	REV__ENSG00000101544|ENST00000262198|ADNP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.739501953125	2	402.739963	803.465373	1.7818	0.00071759	-2.1753	-0.00087608	-0.39351	-0.00015848	402.73894017753986	35.084	1.5442	35.331	34.892	36.436	0.2477					98	39	3	0	0	0	0.87276	1	2627	2627		29.842	0.69198	1	629910	+		13826	17288	9488	9497	15922	15922					0.05577854279761141
HADHSAAVPE	10	Unmodified	_HADHSAAVPE_					0	0	0		nc|ENSG00000158158|Q6P4Q7-2|CNNM4	nc|ENSG00000158158|Q6P4Q7-2|CNNM4	nc|ENSG00000158158|Q6P4Q7-2|CNNM4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7775268554688	2	517.238513	1032.46247	0.42859	0.00022168	-2.5401	-0.0013138	-2.1115	-0.0010922	517.2369489438557	32.629	1.0684	32.756	32.16	33.228	0.12643					37	24	2	0	0	0	0.37624	1	2285	2285		56.721	28.839	1	161870			13827	15026	9489	9498	15923	15923					-0.0524606563569705
HADKRVLH	8	Unmodified	_HADKRVLH_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.27777099609375	2	488.277775	974.540997	0.13811	6.7434E-05	-0.28983	-0.00014152	-0.15173	-7.4084E-05	488.2773386105705	17.666	0.52542	17.055	16.885	17.41	-0.61179					19	13	3	0	0	0	0.87479	1	293	293		30.504	1.3541	1	118960			13828	5428	9490	9499	15924	15924					0.0527083146005225
HADLKWAKSY	10	Unmodified	_HADLKWAKSY_					0	0	0			REV__ENSG00000122034|ENST00000381140|GTF3A	REV__ENSG00000122034|ENST00000381140|GTF3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.8790588378906	3	406.880379	1217.61931	-0.40526	-0.00016489	-2.4481	-0.00099607	-2.8533	-0.001161	406.8793197462454	18.556	0.75912	18.479	18.264	19.023	-0.07671					46	22	4	0	0	0	0.78666	1	328	328		40.058	3.7405	1	489230	+		13829	18479	9491	9500	15925	15925					0.019202192546117658
HADQCIPVH	9	Unmodified	_HADQCIPVH_					0	0	0		nc|ENSG00000074527|Q9HB63-3|NTN4;nc|ENSG00000074527|Q9HB63-2|NTN4;ENSG00000074527|ENST00000343702|NTN4	nc|ENSG00000074527|Q9HB63-3|NTN4	nc|ENSG00000074527|Q9HB63-3|NTN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.2395935058594	2	510.240001	1018.46545	-0.4652	-0.00023736	0.26247	0.00013392	-0.20273	-0.00010344	510.239998618418	36.411	0.68477	36.434	36.145	36.83	0.023624					33	19	2	0	0	0	0.76764	1	1996	1996		34.173	4.331	1	95252			13830	1308	9492	9501	15926	15926					-0.04304513782551567
HAESLSGLSL	10	Unmodified	_HAESLSGLSL_					0	0	0		ENSG00000146904|ENST00000275815|EPHA1	ENSG00000146904|ENST00000275815|EPHA1	ENSG00000146904|ENST00000275815|EPHA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.26629638671875	2	507.266739	1012.51892	1.6734	0.00084884	0.0061956	3.1428E-06	1.6796	0.00085198	507.2673076437526	51.086	1.1107	51.838	51.491	52.601	0.75174					45	26	3	0	0	0	0.43769	1	5067	5067		60.972	6.2073	1	1853200			13831	4868	9493	9502	15927	15927					0.013165622009523759
HAFVELHEF	9	Unmodified	_HAFVELHEF_					0	0	0		nc|ENSG00000108669|Q15438-3|CYTH1;nc|ENSG00000108669|Q15438-2|CYTH1;ENSG00000108669|ENST00000446868|CYTH1;ENST00000591574.5_1_17:76677122-76698292:-|nuORF	nc|ENSG00000108669|Q15438-3|CYTH1	nc|ENSG00000108669|Q15438-3|CYTH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.77783203125	2	564.777274	1127.53999	0.28244	0.00015952	0.30124	0.00017014	0.58369	0.00032965	564.7772293234405	52.92	0.78285	53.338	53.049	53.831	0.41847					41	18	3	0	0	0	0.14115	1	5322	5322		85.359	40.337	1	514650			13832	2424	9494	9503	15928	15928					-0.01867427699539803
HAFVELHEF	9	Unmodified	_HAFVELHEF_					0	0	0		nc|ENSG00000108669|Q15438-3|CYTH1;nc|ENSG00000108669|Q15438-2|CYTH1;ENSG00000108669|ENST00000446868|CYTH1;ENST00000591574.5_1_17:76677122-76698292:-|nuORF	nc|ENSG00000108669|Q15438-3|CYTH1	nc|ENSG00000108669|Q15438-3|CYTH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.7770385742188	2	564.777274	1127.53999	0.42965	0.00024265	-0.42775	-0.00024158	0.0018959	1.0707E-06	564.7768019762257	52.731	0.62164	53.346	53.075	53.696	0.61436					26	14	2	0	0	0	0.28875	1	5302	5302		65.803	11.027	1	647860			13833	2424	9494	9503	15929	15929					-0.01867427699539803
HAGAGLGPYV	10	Unmodified	_HAGAGLGPYV_					0	0	0		ENST00000409245.5_1_2:47143338-47143563:+|nuORF	ENST00000409245.5_1_2:47143338-47143563:+|nuORF	ENST00000409245.5_1_2:47143338-47143563:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	471.24237060546875	2	471.245609	940.476666	-0.95009	-0.00044772	-2.9229	-0.0013774	-3.873	-0.0018251	471.24408596775964	85.692	3.2441	85.877	84.627	87.871	0.18523					176	75	3	0	0	0	0.86786	1	8377	8377		26.796	1.3459	1	288030			13834	11301	9495	9504	15930	15930					0.0040463158322836534
HAGHHAGH	8	Unmodified	_HAGHHAGH_					0	0	0			REV__ENSG00000182759|ENST00000333480|MAFA	REV__ENSG00000182759|ENST00000333480|MAFA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7665710449219	2	412.18896	822.363367	-0.19686	-8.1142E-05	2.2295	0.00091899	2.0327	0.00083785	412.1896469242925	39.66	0.20015	39.612	39.535	39.735	-0.047886					6	4	2	0	0	0	0.4196	1	2455	2455		10.185	5.0979	1	16399	+		13835	22546	9496	9505	15931	15931					-0.0549199901929569
HAGHHAGH	8	Unmodified	_HAGHHAGH_					0	0	0			REV__ENSG00000182759|ENST00000333480|MAFA	REV__ENSG00000182759|ENST00000333480|MAFA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	412.18896	822.363367	0.93903	0.00038706	3.8683	0.0015945	4.8074	0.0019815	412.19088636693755	39.669	0.3026	39.678	39.47	39.773	0.0092812	0.032984	0.00067237	NaN	16.705	11	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19687	+		13836	22546	9496	9505							-0.0549199901929569
HAGPATEE	8	Unmodified	_HAGPATEE_					0	0	0		ENST00000484651.5_1_4:1725148-1739714:+|nuORF;ENSG00000013810|ENST00000313288|TACC3	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.184326171875	2	406.182675	810.350796	0.50969	0.00020703	-0.0068928	-2.7997E-06	0.50279	0.00020423	406.1824390286225	25.249	1.0756	25.299	24.703	25.779	0.050453					54	39	2	0	0	0	0.86288	1	1006	1006		26.796	1.222	1	30656			13837	812	9497	9506	15932	15932					-0.06196499992859117
HAGPATEE	8	Unmodified	_HAGPATEE_					0	0	0		ENST00000484651.5_1_4:1725148-1739714:+|nuORF;ENSG00000013810|ENST00000313288|TACC3	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.182675	810.350796	-0.36718	-0.00014914	6.809	0.0027657	6.4418	0.0026165	406.1868207580952	25.455	0.13824	25.414	25.332	25.47	-0.04117	0.05729	0.0034308	NaN	26.796	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7120.9			13838	812	9497	9506							-0.06196499992859117
HAGPTAHEL	9	Unmodified	_HAGPTAHEL_					0	0	0		ENSG00000135966|ENST00000393359|TGFBRAP1	ENSG00000135966|ENST00000393359|TGFBRAP1	ENSG00000135966|ENST00000393359|TGFBRAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.7333068847656	2	466.732866	931.451179	0.9091	0.00042431	2.0621	0.00096247	2.9712	0.0013868	466.7337412153173	23.721	0.97725	23.147	22.664	23.641	-0.57415					45	22	3	0	0	0	0.69914	1	1126	1126		40.573	4.9543	1	372510			13839	4075	9498	9507	15933	15933					-0.017288429391896898
HAGRKTVK	8	Unmodified	_HAGRKTVK_					0	0	0		ENSG00000102901|ENST00000562787|CENPT;ENST00000574569.1_1_16:67862375-67862787:-|nuORF;ENST00000568495.5_1_16:67862172-67864127:-|nuORF;ENST00000569862.5_1_16:67862172-67864187:-|nuORF	ENSG00000102901|ENST00000562787|CENPT	ENSG00000102901|ENST00000562787|CENPT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.776123046875	2	448.774868	895.535184	-0.16444	-7.3798E-05	4.412	0.00198	4.2475	0.0019062	448.776737585314	43.201	1.9648	43.201	42.284	44.249	0.00016785					102	47	3	0	0	0	0.87064	1	3252	3252		29.15	3.6994	1	235100			13840	2030	9499	9508	15934	15934					0.08323732948383622
HAIMRSPQM	9	Unmodified	_HAIMRSPQM_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7651977539062	2	535.765329	1069.5161	0.26934	0.0001443	-0.51778	-0.00027741	-0.24844	-0.0001331	535.76489892778	32.028	1.0291	32.135	31.717	32.746	0.10707					37	23	2	0	0	0	0.18601	1	2224	2224		76.774	25.439	1	312140			13841	6360	9500	9509	15935	15935					-0.01587307729209897
HAITMQVTKS	10	Unmodified	_HAITMQVTKS_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.2984008789062	2	558.297516	1114.58048	-0.62565	-0.0003493	-3.0381	-0.0016962	-3.6638	-0.0020455	558.2956194038452	42.739	0.63625	42.709	42.373	43.01	-0.029461					27	15	3	0	0	0	0.3985	1	3214	3214		64.207	19.83	1	126890			13842	663	9501	9510	15936	15936					0.02777170628564818
HAITMQVTKS	10	Unmodified	_HAITMQVTKS_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	558.297516	1114.58048	0.18963	0.00010587	-3.7106	-0.0020716	-3.521	-0.0019657	558.2953386853397	42.643	0.5373	42.597	42.291	42.829	-0.045467	-0.030717	-0.00051286	NaN	64.207	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224570			13843	663	9501	9510							0.02777170628564818
HAITMQVTKS	10	Unmodified	_HAITMQVTKS_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	558.297516	1114.58048	-1.4494	-0.00080921	-2.5285	-0.0014117	-3.9779	-0.0022209	558.2959949880612	42.112	0.3932	42.526	42.313	42.706	0.4139	-0.10214	0.00080705	NaN	64.207	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	520220			13844	663	9501	9510							0.02777170628564818
HAITMQVTKS	10	Unmodified	_HAITMQVTKS_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	558.297516	1114.58048	-1.755	-0.00097982	-2.8104	-0.001569	-4.5654	-0.0025489	558.2960072764495	41.892	0.35449	42.526	42.392	42.746	0.6339	-0.10239	0.00049229	NaN	64.207	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	485280			13845	663	9501	9510							0.02777170628564818
HAKDEYVLYYY	11	Unmodified	_HAKDEYVLYYY_					0	0	0		nc|ENSG00000160593|Q86YT9-4|JAML;nc|ENSG00000160593|Q86YT9-2|JAML;ENSG00000160593|ENST00000356289|JAML;ENST00000531536.1_1_11:118076554-118083145:-|nuORF;nc|ENSG00000160593|Q86YT9-3|JAML;ENST00000534294.5_1_11:118074137-118095689:-|nuORF	nc|ENSG00000160593|Q86YT9-4|JAML;ENST00000534294.5_1_11:118074137-118095689:-|nuORF	nc|ENSG00000160593|Q86YT9-4|JAML	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.77069091796875	3	488.566237	1462.67688	-0.32714	-0.00015983	0.89949	0.00043946	0.57235	0.00027963	488.56634026905783	53.143	0.41423	53.757	53.572	53.986	0.61436					15	9	2	0	0	0	0.17784	1	5350	5350		17.167	1.8293	1	184070			13846	5596;13406	9502	9511	15937	15937					-0.0359498333045849
HAKDEYVLYYY	11	Unmodified	_HAKDEYVLYYY_					0	0	0		nc|ENSG00000160593|Q86YT9-4|JAML;nc|ENSG00000160593|Q86YT9-2|JAML;ENSG00000160593|ENST00000356289|JAML;ENST00000531536.1_1_11:118076554-118083145:-|nuORF;nc|ENSG00000160593|Q86YT9-3|JAML;ENST00000534294.5_1_11:118074137-118095689:-|nuORF	nc|ENSG00000160593|Q86YT9-4|JAML;ENST00000534294.5_1_11:118074137-118095689:-|nuORF	nc|ENSG00000160593|Q86YT9-4|JAML	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	488.566237	1462.67688	-0.06824	-3.334E-05	0.58606	0.00028633	0.51782	0.00025299	488.9010416281533	53.434	0.41378	53.848	53.622	54.036	0.4139	0.045243	-0.00016045	NaN	17.167	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	155490			13847	5596;13406	9502	9511							-0.0359498333045849
HAKPLLPG	8	Unmodified	_HAKPLLPG_					0	0	0			REV__ENST00000466405.1_1_3:39133106-39135740:+|nuORF	REV__ENST00000466405.1_1_3:39133106-39135740:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	416.7549133300781	2	416.755613	831.496673	-1.2346	-0.00051453	0.0008669	3.6129E-07	-1.2337	-0.00051417	416.7554996796795	69.232	0.75401	69.298	68.944	69.698	0.065506					85	35	3	0	0	0	0.87276	1	6246	6246		29.842	1.5873	1	1082800	+		13848	27128	9503	9512	15938	15938					0.07418427313848497
HAKPLLPG	8	Unmodified	_HAKPLLPG_					0	0	0			REV__ENST00000466405.1_1_3:39133106-39135740:+|nuORF	REV__ENST00000466405.1_1_3:39133106-39135740:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7550354003906	2	416.755613	831.496673	0.85654	0.00035697	-2.1049	-0.00087723	-1.2484	-0.00052026	416.7546905427035	66.077	1.7412	66.462	65.937	67.678	0.38581					138	48	4	0	0	0	0.87276	1	7190	7190		29.842	1.5873	1	3980900	+		13849	27128	9503	9512	15939	15939					0.07418427313848497
HAKPLLPG	8	Unmodified	_HAKPLLPG_					0	0	0			REV__ENST00000466405.1_1_3:39133106-39135740:+|nuORF	REV__ENST00000466405.1_1_3:39133106-39135740:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7550048828125	2	416.755613	831.496673	0.047442	1.9772E-05	-1.1428	-0.00047629	-1.0954	-0.00045652	416.7550156148421	65.976	1.6616	66.528	65.948	67.61	0.5526					110	49	3	0	0	0	0.87276	6	7185	7165;7185;7196;7220;7228;7252		37.028	1.8278	1	3875200	+		13850	27128	9503	9512	15940;15941;15942;15943;15944;15945	15941					0.07418427313848497
HAKRLSTG	8	Unmodified	_HAKRLSTG_					0	0	0		ENSG00000111728|ENST00000396037|ST8SIA1	ENSG00000111728|ENST00000396037|ST8SIA1	ENSG00000111728|ENST00000396037|ST8SIA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2518005371094	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.85277	1	8257	8257		25.45	1.2474	1	3292300			13851	2608	9504	9513	15946	15946					0.04839453677379879
HALGAWRGR	9	Unmodified	_HALGAWRGR_					0	0	0		nc|ENSG00000205696|A8MUL3|ADARB2-AS1	nc|ENSG00000205696|A8MUL3|ADARB2-AS1	nc|ENSG00000205696|A8MUL3|ADARB2-AS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2822875976562	2	512.283392	1022.55223	-0.82606	-0.00042318	-0.43586	-0.00022328	-1.2619	-0.00064646	512.2830036162308	34.015	0.59412	34.018	33.833	34.427	0.0026054					21	12	2	0	0	0	0.78058	1	2058	2058		30.504	3.8107	1	44458			13852	15221	9505	9514	15947	15947					0.0418565355417968
HALIAGNYGLS	11	Unmodified	_HALIAGNYGLS_					0	0	0			REV__nc|ENSG00000125386|P78312|FAM193A	REV__nc|ENSG00000125386|P78312|FAM193A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	558.298095703125	2	558.29583	1114.57711	0.25943	0.00014484	-0.50456	-0.00028169	-0.24513	-0.00013686	558.2950666729502	42.655	0.57335	42.661	42.392	42.965	0.0057487					36	17	4	0	0	0	0.6921	1	2897	2897		32.812	0	1	180790	+		13853	29823	9506	9515	15948	15948					0.024402438462402642
HALRAWLAVP	10	Unmodified	_HALRAWLAVP_					0	0	0		nc|ENSG00000167889|Q3V5L5-5|MGAT5B;ENSG00000167889|ENST00000569840|MGAT5B;nc|ENSG00000167889|Q3V5L5-2|MGAT5B;chr17:76932775-76937988|40|17.18|0.82|4.39|+|ENST00000428789|MGAT5B,MGAT5B;ENST00000563153.5_1_17:74940311-74944917:+|nuORF;ENST00000568598.1_1_17:74942385-74944917:+|nuORF	nc|ENSG00000167889|Q3V5L5-5|MGAT5B	nc|ENSG00000167889|Q3V5L5-5|MGAT5B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.1920166015625	2	567.33255	1132.65055	-0.15695	-8.9044E-05	2.1636	0.0012275	2.0067	0.0011385	567.3336924076423	23.985	0.6079	23.939	23.559	24.167	-0.04598					20	14	2	0	0	0	0.37624	1	888	888		35.618	6.4687	1	20282			13854	244	9507	9516	15949	15949					0.08952837079368692
HANLNSKAS	9	Unmodified	_HANLNSKAS_					0	0	0			REV__ENSG00000198393|ENST00000328654|ZNF26	REV__ENSG00000198393|ENST00000328654|ZNF26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	471.2422790527344	2	471.243598	940.472643	-0.95009	-0.00044772	1.3453	0.00063398	0.39525	0.00018626	471.24408596775964	85.692	3.2441	85.877	84.627	87.871	0.18523					176	75	3	0	0	0	0.7932	1	8402	8402		25.574	1.3713	1	288030	+		13855	23322	9508	9517	15950	15950					2.5420895212846517E-05
HAPGLPKL	8	Unmodified	_HAPGLPKL_					0	0	0		ENST00000605862.4_1_7:128255955-128262737:+|nuORF	ENST00000605862.4_1_7:128255955-128262737:+|nuORF	ENST00000605862.4_1_7:128255955-128262737:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7555236816406	2	416.755613	831.496673	0.047442	1.9772E-05	-1.1428	-0.00047629	-1.0954	-0.00045652	416.7550156148421	65.976	1.6616	66.528	65.948	67.61	0.5526					110	49	3	0	0	0	0.86791	1	7264	7264		28.254	1.4582	1	3875200			13856	14439	9509	9518	15951	15951					0.07418427313837128
HAPHYLPDH	9	Unmodified	_HAPHYLPDH_					0	0	0		ENST00000429277.6_2_10:88428483-88439167:+|nuORF	ENST00000429277.6_2_10:88428483-88439167:+|nuORF	ENST00000429277.6_2_10:88428483-88439167:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.831298828125	2	543.759415	1085.50428	2.1894	0.0011905	4.2133	0.002291	6.4027	0.0034815	543.7615070320409	25.378	0.52347	24.947	24.627	25.15	-0.4311					19	11	2	0	0	0	0.20789	1	1269	1269		30.504	0	1	67146			13857	11607	9510	9519	15952	15952					-0.03505465156536047
HAPITQNQ	8	Unmodified	_HAPITQNQ_					0	0	0			REV__ENST00000366672.4_1_1:230416440-230416554:+|nuORF	REV__ENST00000366672.4_1_1:230416440-230416554:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.7325134277344	2	454.732866	907.451179	0.63675	0.00028955	-0.97641	-0.00044401	-0.33966	-0.00015446	454.73244002937486	28.356	0.58841	28.333	28.163	28.751	-0.023556					18	13	2	0	0	0	0.92457	1	1365	1365		47.916	5.5195	1	42074	+		13858	25532	9511	9520	15953	15953					-0.00624842939203063
HAPLLGPK	8	Unmodified	_HAPLLGPK_					0	0	0			REV__ENSG00000136478|ENST00000584379|TEX2	REV__ENSG00000136478|ENST00000584379|TEX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	416.7545166015625	2	416.755613	831.496673	-1.8373	-0.00076571	0.26309	0.00010964	-1.5742	-0.00065607	416.7557703392063	69.009	0.92305	69.144	68.682	69.606	0.13521					98	39	4	0	0	0	0.89457	1	6204	6204		37.028	7.1869	1	1065300	+		13859	19313	9512	9521	15954	15954					0.07418427313859866
HAPLVKIKFP	10	Unmodified	_HAPLVKIKFP_					0	0	0			REV__nc|ENSG00000128591|Q14315-2|FLNC	REV__nc|ENSG00000128591|Q14315-2|FLNC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.2879028320312	2	575.360776	1148.707	-0.33858	-0.00019481	2.0734	0.001193	1.7348	0.00099816	575.8632678245087	68.586	0.63574	68.619	68.314	68.949	0.033005					38	23	2	0	0	0	0.37624	1	6585	6585		10.866	4.13	1	59202	+		13860	18782	9513	9522	15955	15955					0.13859464916049546
HAPRPRRR	8	Unmodified	_HAPRPRRR_					0	0	0			REV__ENST00000414563.6_1_6:157802226-157802931:+|nuORF	REV__ENST00000414563.6_1_6:157802226-157802931:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3035278320312	2	523.315558	1044.61656	0.70931	0.00037119	3.9183	0.0020505	4.6277	0.0024217	523.3180293094014	87.913	0.43098	88.063	87.81	88.241	0.14956					19	9	3	0	0	0	0.4196	1	8679	8679		18.324	6.1176	1	64556	+		13861	26404	9514	9523	15956	15956					0.0960385343098551
HAQGDKRPAP	10	Unmodified	_HAQGDKRPAP_					0	0	0		ENST00000577399.5_1_17:37558580-37558763:-|nuORF	ENST00000577399.5_1_17:37558580-37558763:-|nuORF	ENST00000577399.5_1_17:37558580-37558763:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.7907104492188	2	538.783422	1075.55229	-0.35906	-0.00019345	-2.2244	-0.0011985	-2.5835	-0.0013919	538.7822206139183	64.942	0.63029	65.496	65.024	65.654	0.55386					19	15	2	0	0	0	0.37624	1	7039	7039		24.519	0	1	139730			13862	14067	9515	9524	15957	15957					0.017536087635107833
HAQLKGQCW	9	Unmodified	_HAQLKGQCW_					0	0	0			REV__nc|ENSG00000136717|O00499-3|BIN1	REV__nc|ENSG00000136717|O00499-3|BIN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7646484375	2	535.763643	1069.51273	0.26934	0.0001443	2.628	0.001408	2.8974	0.0015523	535.76489892778	32.028	1.0291	32.135	31.717	32.746	0.10707					37	23	2	0	0	0	0.5393	1	2213	2213		50.025	10.772	1	312140	+		13863	19329	9516	9525	15958	15958					-0.01924234511557188
HAQMFIPPF	9	Unmodified	_HAQMFIPPF_					0	0	0			REV__nc|ENSG00000183981|A6NCF6|MAGEA13P	REV__nc|ENSG00000183981|A6NCF6|MAGEA13P	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.1619262695312	2	544.273312	1086.53207	-0.99698	-0.00054263	2.7575	0.0015008	1.7605	0.00095818	544.2746916720924	46.121	0.47671	47.017	46.728	47.205	0.89542					25	11	3	0	0	0	0.20789	1	4301	4301		33.516	10.473	1	491440	+		13864	30091	9517	9526	15959	15959					-0.007732782206630873
HAQQYWHKVL	10	Unmodified	_HAQQYWHKVL_					0	0	0			REV__nc|ENSG00000135114|Q15646-2|OASL	REV__nc|ENSG00000135114|Q15646-2|OASL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2650451660156	3	437.231523	1308.67274	-0.36059	-0.00015766	-4.2464	-0.0018567	-4.607	-0.0020143	437.22820874538775	25.469	0.13824	25.428	25.332	25.47	-0.04117					5	4	2	0	0	0	0.37624	1	1069	1069		7.8045	0	1	7520.3	+		13865	29862	9518	9527	15960	15960					0.030750167571113707
HARALYVL	8	Unmodified	_HARALYVL_					0	0	0		ENSG00000105767|ENST00000222374|CADM4	ENSG00000105767|ENST00000222374|CADM4	ENSG00000105767|ENST00000222374|CADM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.7796630859375	2	471.779619	941.544686	-0.44647	-0.00021064	-0.91261	-0.00043055	-1.3591	-0.00064118	471.7790174036812	82.614	0.85271	82.673	82.295	83.148	0.059166					41	19	3	0	0	0	0.83466	1	8308	8308		23.037	1.3344	1	250090			13866	2250	9519	9528	15961	15961					0.07157501233893981
HARGKTVINVV	11	Unmodified	_HARGKTVINVV_					0	0	0		ENST00000493619.1_1_6:107019873-107020229:-|nuORF;nc|ENSG00000130347|Q8WWV3-2|RTN4IP1;ENSG00000130347|ENST00000369063|RTN4IP1	ENST00000493619.1_1_6:107019873-107020229:-|nuORF	ENST00000493619.1_1_6:107019873-107020229:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.3592529296875	2	597.359296	1192.70404	-0.45682	-0.00027289	-1.281	-0.00076525	-1.7379	-0.0010381	597.3582006630761	100.19	3.2446	100.23	98.977	102.22	0.046349					174	76	4	0	0	0	0.72106	1	10699	10699		28.081	1.3886	1	4145900			13867	3638	9520	9529	15962	15962					0.115395897911867
HARKHTILAS	10	Unmodified	_HARKHTILAS_					0	0	0			REV__nc|ENSG00000125846|P52736-3|ZNF133	REV__nc|ENSG00000125846|P52736-3|ZNF133	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3325805664062	2	567.330539	1132.64652	2.2464	0.0012745	-3.1592	-0.0017923	-0.91276	-0.00051784	567.3287050731724	113.77	1.2385	113.79	113.12	114.36	0.020027					89	56	2	0	0	0	0.86272	1	13745	13745		24.519	0.31644	1	84963	+		13868	18674	9521	9530	15963	15963					0.0855074758567298
HARLAPPQ	8	Unmodified	_HARLAPPQ_					0	0	0			REV__ENST00000568956.1_1_19:56116859-56125214:+|nuORF	REV__ENST00000568956.1_1_19:56116859-56125214:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	444.732177734375	2	445.253769	888.492984	1.3316	0.00059291	-0.49046	-0.00021838	0.84116	0.00037453	445.2536025940404	34.36	1.7378	34.665	33.745	35.483	0.30494					59	42	2	0	0	0	0.4196	1	2522	2522		25.45	0	1	2542300	+		13869	28904	9522	9531	15964	15964					0.044277575399860325
HARLTQAS	8	Unmodified	_HARLTQAS_					0	0	0			REV__ENST00000523568.1_7:102228019-102246337:-|nuORF	REV__ENST00000523568.1_7:102228019-102246337:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2405090332031	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.89043	1	7658	7658		35.618	5.1146	1	716910	+		13870	17571	9523	9532	15965	15965					0.021228632976999506
HARLTQAS	8	Unmodified	_HARLTQAS_					0	0	0			REV__ENST00000523568.1_7:102228019-102246337:-|nuORF	REV__ENST00000523568.1_7:102228019-102246337:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.24078369140625	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.884	1	8265	8265		33.516	3.1979	1	1238700	+		13871	17571	9523	9532	15966	15966					0.021228632976999506
HARLTQAS	8	Unmodified	_HARLTQAS_					0	0	0			REV__ENST00000523568.1_7:102228019-102246337:-|nuORF	REV__ENST00000523568.1_7:102228019-102246337:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2408447265625	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.90465	1	8257	8257		40.573	1.7665	1	1244000	+		13872	17571	9523	9532	15967	15967					0.021228632976999506
HARLTQAS	8	Unmodified	_HARLTQAS_					0	0	0			REV__ENST00000523568.1_7:102228019-102246337:-|nuORF	REV__ENST00000523568.1_7:102228019-102246337:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2408447265625	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.87479	1	7712	7712		30.504	1.3541	1	1094000	+		13873	17571	9523	9532	15968	15968					0.021228632976999506
HASDRIIAL	9	Unmodified	_HASDRIIAL_					0	0	0		ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENSG00000163931|ENST00000462138|TKT;nc|ENSG00000163931|P29401-2|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF	ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF	ENST00000461139.5_1_3:53259774-53265639:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2845764160156	2	498.285266	994.555979	-2.5948	-0.0012929	0.97869	0.00048767	-1.6161	-0.00080527	498.2856178794524	41.627	0.88319	42.041	41.823	42.706	0.4139					56	22	3	0	0	0	0.086373	4	3683	3646;3657;3669;3683		95.815	40.928	1	4012700			13874	5884;12206	9524	9533	15969;15970;15971;15972	15972					0.058482785373598745
HASDRIIAL	9	Unmodified	_HASDRIIAL_					0	0	0		ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENSG00000163931|ENST00000462138|TKT;nc|ENSG00000163931|P29401-2|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF	ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF	ENST00000461139.5_1_3:53259774-53265639:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.2846984863281	2	498.285266	994.555979	-1.7202	-0.00085715	0.38744	0.00019306	-1.3328	-0.00066409	498.285349240445	41.522	0.86949	42.156	41.917	42.786	0.6339					54	22	4	0	0	0	0.034797	4	3645	3645;3657;3669;3683		115.49	56.712	1	3866100			13875	5884;12206	9524	9533	15973;15974;15975;15976	15973					0.058482785373598745
HASEPLVSDLL	11	Unmodified	_HASEPLVSDLL_					0	0	0			REV__ENSG00000125999|ENST00000253354|BPIFB1	REV__ENSG00000125999|ENST00000253354|BPIFB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8147583007812	2	590.814053	1179.61355	-0.47583	-0.00028113	0.92971	0.00054929	0.45388	0.00026816	590.8146636802912	49.04	1.1924	49.035	48.561	49.754	-0.0056419					55	26	3	0	0	0	0.64498	1	4094	4094		39.253	0.49923	1	226240	+		13876	18689	9525	9534	15977	15977					0.03093075952278923
HASGGTRNH	9	Unmodified	_HASGGTRNH_					0	0	0			REV__CON__P15636	REV__CON__P15636	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7232971191406	2	468.723364	935.432175	1.0229	0.00047944	-0.61305	-0.00028735	0.40982	0.00019209	468.722942940269	93.238	1.0458	93.679	93.148	94.194	0.44099					53	24	3	0	0	0	0.71772	1	11094	11094		39.253	2.0937	1	566820	+	+	13877	15984	9526	9535	15978	15978					-0.03812379510247865
HASGRVAPPL	10	Unmodified	_HASGRVAPPL_					0	0	0			REV__ENST00000462537.3_1_6:36646575-36648628:+|nuORF	REV__ENST00000462537.3_1_6:36646575-36648628:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	502.81414794921875	2	502.785433	1003.55631	-0.084913	-4.2693E-05	-0.96239	-0.00048388	-1.0473	-0.00052657	502.7849569507797	97.444	0.45918	97.492	97.291	97.75	0.048164					15	10	2	0	0	0	0.37624	1	10402	10402		47.657	12.039	1	56014	+		13878	27056	9527	9536	15979	15979					0.054676982572118504
HATPVFPSV	9	Unmodified	_HATPVFPSV_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	477.7550048828125	2	477.75581	953.497067	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.064	1	18.14	17.64	18.64	0.075441								0	0	0	0.30053	1	247	247		30.504	1.3336	1				13879	2287	9528	9537	15980	15980					0.018458022430536403
HATVGHQAS	9	Unmodified	_HATVGHQAS_					0	0	0			REV__ENST00000315150.9_1_3:128809278-128809476:-|nuORF	REV__ENST00000315150.9_1_3:128809278-128809476:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.2251892089844	2	454.222665	906.430778	-0.13636	-6.1936E-05	4.4839	0.0020367	4.3476	0.0019748	454.22464171732514	79.725	2.7215	79.785	78.721	81.443	0.059349					125	79	2	0	0	0	0.7932	1	7824	7824		25.574	0.12388	1	104480	+		13880	24943	9529	9538	15981	15981					-0.026180135990102826
HAVSPKQL	8	Unmodified	_HAVSPKQL_					0	0	0			REV__ENST00000444273.6_1_6:56954967-57015704:+|nuORF	REV__ENST00000444273.6_1_6:56954967-57015704:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.25543212890625	2	440.255977	878.497401	0.43968	0.00019357	-1.7375	-0.00076495	-1.2978	-0.00057137	440.2550261626726	67.317	0.79267	67.444	67.122	67.915	0.12748					63	30	3	0	0	0	0.84341	1	6014	6014		24.203	2.2429	1	418260	+		13881	17924	9530	9539	15982	15982					0.05329221962904285
HCAKVLKAI	9	Unmodified	_HCAKVLKAI_					0	0	0		nc|ENSG00000111300|Q14CX7-2|NAA25;ENST00000552527.5_1_12:112478245-112546577:-|nuORF;ENSG00000111300|ENST00000261745|NAA25	nc|ENSG00000111300|Q14CX7-2|NAA25	nc|ENSG00000111300|Q14CX7-2|NAA25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79541015625	2	491.796955	981.579357	-0.035071	-1.7248E-05	-2.2514	-0.0011072	-2.2864	-0.0011245	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.7932	1	4840	4840		18.324	0	1	1625300			13882	2571	9531	9540	15983	15983					0.08783001050358052
HCAKVLKAI	9	Unmodified	_HCAKVLKAI_					0	0	0		nc|ENSG00000111300|Q14CX7-2|NAA25;ENST00000552527.5_1_12:112478245-112546577:-|nuORF;ENSG00000111300|ENST00000261745|NAA25	nc|ENSG00000111300|Q14CX7-2|NAA25	nc|ENSG00000111300|Q14CX7-2|NAA25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957763671875	2	491.796955	981.579357	-0.71044	-0.00034939	-1.7767	-0.00087377	-2.4871	-0.0012232	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.69914	1	4172	4172		40.573	8.6178	1	571510			13883	2571	9531	9540	15984	15984					0.08783001050358052
HCAVCIESY	9	Unmodified	_HCAVCIESY_					0	0	0		nc|ENSG00000113269|Q86XS8-2|RNF130;ENSG00000113269|ENST00000521389|RNF130	nc|ENSG00000113269|Q86XS8-2|RNF130	nc|ENSG00000113269|Q86XS8-2|RNF130	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2337646484375	2	512.71497	1023.41539	-0.90317	-0.00046307	3.8355	0.0019665	2.9323	0.0015034	512.7168379928119	57.659	0.85729	57.693	57.35	58.207	0.033905					59	25	3	0	0	0	0.20789	1	5320	5320		19.36	1.0356	1	664450			13884	2709	9532	9541	15985	15985					-0.09538384502707231
HCCCCGRYS	9	Unmodified	_HCCCCGRYS_					0	0	0		ENST00000482967.5_1_20:31946851-31989286:-|nuORF	ENST00000482967.5_1_20:31946851-31989286:-|nuORF	ENST00000482967.5_1_20:31946851-31989286:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8289794921875	2	516.16935	1030.32415	0.18111	9.3486E-05	-1.9763	-0.0010201	-1.7952	-0.00092662	516.1681924903843	83.044	0.32354	83.517	83.213	83.537	0.47383					11	7	2	0	0	0	0.20789	1	9622	9622		16.473	3.514	1	97809			13885	12499	9533	9542	15986	15986					-0.1898029474334635
HCCCRNFQP	9	Unmodified	_HCCCRNFQP_					0	0	0		nc|ENSG00000131482|P35575-2|G6PC1	nc|ENSG00000131482|P35575-2|G6PC1	nc|ENSG00000131482|P35575-2|G6PC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.2616577148438	2	554.217688	1106.42082	0.22763	0.00012616	-1.6676	-0.00092422	-1.44	-0.00079807	554.2165856107584	72.79	0.49226	72.832	72.622	73.114	0.042114					32	20	2	0	0	0	0.20789	1	7042	7042		17.365	10.629	1	105740			13886	14915	9534	9543	15987	15987					-0.12812984191918986
HCCSPGCQPTC	11	Unmodified	_HCCSPGCQPTC_					0	0	0		ENSG00000212659|ENST00000391355|KRTAP9-6	ENSG00000212659|ENST00000391355|KRTAP9-6	ENSG00000212659|ENST00000391355|KRTAP9-6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.1930541992188	2	568.193022	1134.37149	1.1238	0.00063851	-2.5016	-0.0014214	-1.3779	-0.00078291	568.1915037124662	26.295	1.5915	26.263	25.398	26.99	-0.032125					67	40	3	0	0	0	0.77421	1	1016	1016		16.717	1.0756	1	60207			13887	8572	9535	9544	15988	15988					-0.1903206026299813
HCCSPGCQPTC	11	Unmodified	_HCCSPGCQPTC_					0	0	0		ENSG00000212659|ENST00000391355|KRTAP9-6	ENSG00000212659|ENST00000391355|KRTAP9-6	ENSG00000212659|ENST00000391355|KRTAP9-6	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	568.193022	1134.37149	-1.4786	-0.00084011	0.33293	0.00018917	-1.1456	-0.00065094	568.1930286403483	26.295	0.74639	26.295	25.993	26.739	0	0.006196	0.0021263	NaN	16.717	55	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46709			13888	8572	9535	9544							-0.1903206026299813
HCCSPGCQPTC	11	Unmodified	_HCCSPGCQPTC_					0	0	0		ENSG00000212659|ENST00000391355|KRTAP9-6	ENSG00000212659|ENST00000391355|KRTAP9-6	ENSG00000212659|ENST00000391355|KRTAP9-6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	568.193022	1134.37149	0.3735	0.00021222	-1.3861	-0.00078755	-1.0126	-0.00057533	568.1919506655412	26.284	0.5124	26.351	26.025	26.538	0.066877	0.062242	0.00017288	NaN	16.717	36	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39779			13889	8572	9535	9544							-0.1903206026299813
HCCSPGCQPTC	11	Unmodified	_HCCSPGCQPTC_					0	0	0		ENSG00000212659|ENST00000391355|KRTAP9-6	ENSG00000212659|ENST00000391355|KRTAP9-6	ENSG00000212659|ENST00000391355|KRTAP9-6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	568.193022	1134.37149	0.81016	0.00046033	-2.3048	-0.0013096	-1.4946	-0.00084925	568.1917181930179	26.127	0.69278	26.155	25.805	26.498	0.02817	-0.13374	-0.00087117	NaN	16.717	58	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76934			13890	8572	9535	9544							-0.1903206026299813
HCCSPGCQPTC	11	Unmodified	_HCCSPGCQPTC_					0	0	0		ENSG00000212659|ENST00000391355|KRTAP9-6	ENSG00000212659|ENST00000391355|KRTAP9-6	ENSG00000212659|ENST00000391355|KRTAP9-6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	568.193022	1134.37149	0.043468	2.4698E-05	-1.1692	-0.00066432	-1.1257	-0.00063962	568.1923462778597	26.556	0.45141	26.38	26.071	26.523	-0.17559	0.090958	0.00041934	NaN	16.717	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30789			13891	8572	9535	9544							-0.1903206026299813
HCEASSQHV	9	Unmodified	_HCEASSQHV_					0	0	0		nc|ENSG00000117425|Q9Y6C5-2|PTCH2;ENSG00000117425|ENST00000372192|PTCH2	nc|ENSG00000117425|Q9Y6C5-2|PTCH2	nc|ENSG00000117425|Q9Y6C5-2|PTCH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.2139587402344	2	499.21144	996.408328	1.2427	0.00062037	2.4332	0.0012147	3.6759	0.001835	499.2124324411346	104.01	1.0565	104.2	103.97	105.03	0.18888					52	26	3	0	0	0	0.72402	1	12720	12720		38.806	5.3132	1	253780			13892	2978	9536	9545	15989	15989					-0.09001981058918318
HCEASSQHV	9	Unmodified	_HCEASSQHV_					0	0	0		nc|ENSG00000117425|Q9Y6C5-2|PTCH2;ENSG00000117425|ENST00000372192|PTCH2	nc|ENSG00000117425|Q9Y6C5-2|PTCH2	nc|ENSG00000117425|Q9Y6C5-2|PTCH2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	499.21144	996.408328	3.4761	0.0017353	0.040071	2.0004E-05	3.5161	0.0017553	499.21139272243397	103.95	0.81995	104.22	104.02	104.84	0.26524	0.0090195	-0.00091475	NaN	38.806	36	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	371590			13893	2978	9536	9545							-0.09001981058918318
HCFNKMTNL	9	Unmodified	_HCFNKMTNL_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF	nc|ENSG00000173193|Q460N5-4|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.2597045898438	2	554.257336	1106.50012	-0.20419	-0.00011317	3.1373	0.0017389	2.9331	0.0016257	554.2589451632552	71.042	2.142	71.59	71.166	73.308	0.54756					123	51	4	0	0	0	0.41566	1	7964	7964		56.721	9.0637	1	2743300			13894	6838;12327	9537	9546	15990	15990					-0.048870139661175926
HCGGEGDR	8	Unmodified	_HCGGEGDR_					0	0	0			REV__chr19:4366570-4366926|30|41.6|0.0|21.99|-|2|None,SH3GL1|3	REV__chr19:4366570-4366926|30|41.6|0.0|21.99|-|2|None,SH3GL1|3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	414.76165771484375	2	415.664126	829.313699	0.61786	0.00025682	0.070168	2.9167E-05	0.68803	0.00028599	415.6640437361861	87.97	0.88957	88.121	87.555	88.445	0.1502					35	20	2	0	0	0	0.4196	1	8755	8755		13.775	0	1	92518	+		13895	15706	9538	9547	15991	15991					-0.10778494810267603
HCGKTYRSKAG	11	Unmodified	_HCGKTYRSKAG_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2033386230469	3	403.204868	1206.59277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.431	1	15.509	15.009	16.009	0.077959								0	0	0	0.56276	1	28	28		23.378	1.6922	1				13896	8094	9539	9548	15992	15992					-0.002257929083725685
HCIQCHEP	8	Unmodified	_HCIQCHEP_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.766845703125	2	483.699654	965.384756	0.60953	0.00029483	-0.12416	-6.0057E-05	0.48537	0.00023477	483.69926553673724	37.287	0.41333	37.6	37.411	37.825	0.31312					13	9	2	0	0	0	0.4196	1	2956	2956		1.4648	0	1	77353	+		13897	17832	9540	9549	15993	15993					-0.09932118097106013
HCKPAKAL	8	Unmodified	_HCKPAKAL_					0	0	0		ENSG00000135220|ENST00000251566|UGT2A3	ENSG00000135220|ENST00000251566|UGT2A3	ENSG00000135220|ENST00000251566|UGT2A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	434.247098	866.479642	1.3904	0.00060376	-2.8299	-0.0012289	-1.4396	-0.00062513	434.24647651274034	33.834	0.4126	34.139	33.994	34.406	0.30494					14	9	2	0	0	0	0.4196	1	2474	2474		25.45	10.786	1	127450			13898	3992	9541	9550	15994	15994					0.04106183436385891
HCKPHCDRNR	10	Unmodified	_HCKPHCDRNR_					0	0	0		ENSG00000214226|ENST00000397861|C17orf67	ENSG00000214226|ENST00000397861|C17orf67	ENSG00000214226|ENST00000397861|C17orf67	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.53076171875	3	422.529469	1264.56658	-0.4052	-0.00017121	3.2748	0.0013837	2.8696	0.0012125	422.53085422271215	18.196	0.22849	18.12	17.998	18.227	-0.07671					11	7	2	0	0	0	0.77314	1	276	276		30.569	1.0181	1	27767			13899	8621	9542	9551	15995	15995					-0.055123853515169685
HCLLARLIL	9	Unmodified	_HCLLARLIL_					0	0	0			REV__ENST00000434724.6_1_16:11966790-11966895:-|nuORF	REV__ENST00000434724.6_1_16:11966790-11966895:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.32470703125	2	526.325879	1050.63721	-0.67072	-0.00035302	-1.355	-0.00071317	-2.0257	-0.0010662	526.3250687277414	64.714	3.1276	64.752	62.47	65.598	0.037849					207	130	2	0	0	0	0.64338	1	5765	5765		44.531	12.576	1	198930	+		13900	26669	9543	9552	15996	15996					0.11391262975780592
HCLLARLIL	9	Unmodified	_HCLLARLIL_					0	0	0			REV__ENST00000434724.6_1_16:11966790-11966895:-|nuORF	REV__ENST00000434724.6_1_16:11966790-11966895:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	526.325879	1050.63721	-0.17502	-9.2117E-05	-1.7819	-0.00093784	-1.9569	-0.00103	526.3247837592626	64.824	1.5452	64.949	64.02	65.565	0.12545	0.098907	-0.00034822	NaN	44.531	79	59	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141460	+		13901	26669	9543	9552							0.11391262975780592
HCLLNRQV	8	Unmodified	_HCLLNRQV_					0	0	0		ENST00000600751.6_2_19:6953206-6957198:-|nuORF;nc|ENSG00000268758|Q86SQ3|ADGRE4P	ENST00000600751.6_2_19:6953206-6957198:-|nuORF	ENST00000600751.6_2_19:6953206-6957198:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79559326171875	2	491.766186	981.517819	-0.65412	-0.00032167	4.088	0.0020103	3.4338	0.0016886	491.7686224996804	50.087	0.26397	50.063	49.856	50.12	-0.02343					7	5	2	0	0	0	0.4196	1	4309	4309		18.324	0	1	31870			13902	14383	9544	9553	15997	15997					0.026320693510683668
HCLWPPSP	8	Unmodified	_HCLWPPSP_					0	0	0		ENST00000564907.5_1_16:57697518-57697860:+|nuORF	ENST00000564907.5_1_16:57697518-57697860:+|nuORF	ENST00000564907.5_1_16:57697518-57697860:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72314453125	2	468.723455	935.432358	-0.013184	-6.1798E-06	-0.65315	-0.00030615	-0.66633	-0.00031233	468.7232380662735	77.148	2.5429	77.547	77.268	79.811	0.3997					145	61	5	0	0	0	0.87276	1	8757	8757		29.842	0.69198	1	15095000			13903	13896	9545	9554	15998	15998					-0.03794095834609834
HCLWPPSP	8	Unmodified	_HCLWPPSP_					0	0	0		ENST00000564907.5_1_16:57697518-57697860:+|nuORF	ENST00000564907.5_1_16:57697518-57697860:+|nuORF	ENST00000564907.5_1_16:57697518-57697860:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7231750488281	2	468.723455	935.432358	-0.58063	-0.00027215	-0.49716	-0.00023303	-1.0778	-0.00050519	468.72346030200146	77.011	2.0488	77.579	77.289	79.337	0.56836					141	50	5	0	0	0	0.89457	1	8842	8842		37.028	11.578	1	13648000			13904	13896	9545	9554	15999	15999					-0.03794095834609834
HCPGPSLD	8	Unmodified	_HCPGPSLD_					0	0	0			REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1836853027344	2	413.18162	824.348688	2.4158	0.00099815	-0.090388	-3.7347E-05	2.3254	0.0009608	413.18190794566056	101.46	1.3715	101.76	101.48	102.86	0.2999					93	36	5	0	0	0	0.86288	1	12350	12350		26.796	0	1	7829900	+		13905	29808	9546	9555	16000	16000					-0.07051252002315778
HCRCDAGC	8	Unmodified	_HCRCDAGC_					0	0	0			REV__nc|ENSG00000124496|Q96PN7-3|TRERF1	REV__nc|ENSG00000124496|Q96PN7-3|TRERF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5977783203125	2	432.649107	863.283662	2.7179	0.0011759	1.3735	0.00059426	4.0915	0.0017702	432.64730659918104	106.46	0.21704	106.42	106.23	106.45	-0.034134					6	4	2	0	0	0	0.4196	1	11756	11756		4.6817	0.36548	1	21609	+		13906	18591	9547	9556	16001	16001					-0.15344893071471688
HCRLPLKLL	9	Unmodified	_HCRLPLKLL_					0	0	0			REV__ENST00000379825.6_2_9:32973498-32973681:-|nuORF	REV__ENST00000379825.6_2_9:32973498-32973681:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.8416137695312	2	546.839154	1091.66375	0.19665	0.00010754	0.64311	0.00035168	0.83976	0.00045921	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.7932	1	10845	10845		24.203	0	1	55511000	+		13907	19356	9548	9557	16002	16002					0.12158951867104406
HCRLPLKLL	9	Unmodified	_HCRLPLKLL_					0	0	0			REV__ENST00000379825.6_2_9:32973498-32973681:-|nuORF	REV__ENST00000379825.6_2_9:32973498-32973681:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8408203125	2	546.839154	1091.66375	0.84844	0.00046396	0.31838	0.0001741	1.1668	0.00063807	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.7932	1	10813	10813		24.203	0	1	43597000	+		13908	19356	9548	9557	16003	16003					0.12158951867104406
HCRLPLKLL	9	Unmodified	_HCRLPLKLL_					0	0	0			REV__ENST00000379825.6_2_9:32973498-32973681:-|nuORF	REV__ENST00000379825.6_2_9:32973498-32973681:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8401489257812	2	546.839154	1091.66375	0.96702	0.0005288	0.63033	0.00034469	1.5974	0.0008735	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.72402	1	12261	12261		38.806	8.3025	1	9124000	+		13909	19356	9548	9557	16004	16004					0.12158951867104406
HCRRLVLSKLT	11	Unmodified	_HCRRLVLSKLT_					0	0	0			REV__ENSG00000158077|ENST00000299481|NLRP14	REV__ENSG00000158077|ENST00000299481|NLRP14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.6009521484375	3	442.599329	1324.77616	1.7929	0.00079355	1.977	0.00087503	3.77	0.0016686	442.6001215105029	103.71	1.4704	103.75	103.32	104.79	0.041481					92	35	4	0	0	0	0.74771	1	11266	11266		22.562	0.78116	1	665090	+		13910	20585	9549	9558	16005	16005					0.12676180873268095
HCRRSWSSD	9	Unmodified	_HCRRSWSSD_					0	0	0		ENST00000521817.1_1_8:95272332-95274320:-|nuORF;ENST00000523660.1_1_8:95272332-95274501:-|nuORF;ENSG00000164949|ENST00000297596|GEM	ENST00000521817.1_1_8:95272332-95274320:-|nuORF	ENST00000521817.1_1_8:95272332-95274320:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3300170898438	2	567.248889	1132.48322	-1.3961	-0.00079193	4.1055	0.0023288	2.7094	0.0015369	567.2512584048316	91.967	0.25664	92.153	92.003	92.259	0.18582					6	5	2	0	0	0	0.20789	1	9225	9225		20.947	0	1	25703			13911	6030	9550	9559	16006	16006					-0.07771798527687679
HCRSKDVAKIL	11	Unmodified	_HCRSKDVAKIL_					0	0	0		ENSG00000215251|ENST00000380266|FASTKD5	ENSG00000215251|ENST00000380266|FASTKD5	ENSG00000215251|ENST00000380266|FASTKD5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.5252990722656	3	423.908052	1268.70233	1.9925	0.00084462	2.9648	0.0012568	4.9573	0.0021014	423.9093905937335	24.473	0.80133	23.959	23.615	24.416	-0.51365					30	17	2	0	0	0	0.1747	1	1178	1178		41.08	25.743	1	110410			13912	8650	9551	9560	16007	16007					0.07872212710958593
HCRYHCCRHCR	11	Unmodified	_HCRYHCCRHCR_					0	0	0			REV__nc|ENSG00000156050|Q96MY7-2|FAM161B	REV__nc|ENSG00000156050|Q96MY7-2|FAM161B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2159729003906	3	491.870843	1472.5907	0.33189	0.00016325	0.40781	0.00020059	0.73969	0.00036383	491.870585315489	29.526	0.1699	29.437	29.319	29.489	-0.089544					5	3	2	0	0	0	0.18216	1	1870	1870		6.001	0	1	43767	+		13913	29948	9552	9561	16008	16008					-0.126691914611456
HCSRCLNK	8	Carbamidomethyl (C)	_HCSRC(Carbamidomethyl (C))LNK_	HC(0.004)SRC(0.996)LNK		HC(-23)SRC(23)LNK		0	1	0		ENST00000513348.5_1_4:183837609-183837844:-|nuORF;ENST00000508994.1_3_4:183837609-183838521:-|nuORF	ENST00000513348.5_1_4:183837609-183837844:-|nuORF	ENST00000513348.5_1_4:183837609-183837844:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2403564453125	2	509.239478	1016.4644	-0.12162	-6.1934E-05	2.5393	0.0012931	2.4177	0.0012312	509.2406534616815	38.33	2.3682	38.852	38.473	40.841	0.52236					103	56	2	0	0	0	0.47906	1	3171	3171		76.847	25.511	2	906030			13914	12984	9553	9562	16009	16009	169				-0.04317051423106477
HCVAAILWHSY	11	Unmodified	_HCVAAILWHSY_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.882080078125	3	433.881614	1298.62301	0.043133	1.8714E-05	2.817	0.0012222	2.8601	0.0012409	433.8827900812732	32.362	0.7021	32.373	32.112	32.814	0.010899					46	20	3	0	0	0	0.66009	1	1805	1805		37.508	10.758	1	219290			13915	2871	9554	9563	16010	16010					-0.01435434243171585
HCWKCLLIAES	11	Unmodified	_HCWKCLLIAES_					0	0	0		nc|ENSG00000141068|Q8IVT5-4|KSR1;nc|ENSG00000141068|Q8IVT5-3|KSR1;nc|ENSG00000141068|Q8IVT5|KSR1	nc|ENSG00000141068|Q8IVT5-4|KSR1	nc|ENSG00000141068|Q8IVT5-4|KSR1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.88458251953125	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.61	1	113.63	113.13	114.13	0.020027								0	0	0	0.56276	1	13717	13717		20.03	2.8637	1				13916	14962	9555	9564	16011	16011					-0.01269927180646846
HDAGVQCIPHC	11	2 Carbamidomethyl (C)	_HDAGVQC(Carbamidomethyl (C))IPHC(Carbamidomethyl (C))_	HDAGVQC(1)IPHC(1)		HDAGVQC(53)IPHC(53)		0	2	0		ENST00000336308.9_1_17:37814089-37814275:+|nuORF	ENST00000336308.9_1_17:37814089-37814275:+|nuORF	ENST00000336308.9_1_17:37814089-37814275:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	647.2721557617188	2	647.276789	1292.53902	0.73603	0.00047642	-2.9129	-0.0018855	-2.1769	-0.0014091	647.2748155540521	54.773	0.63497	54.8	54.48	55.115	0.027138					29	19	2	0	0	0	0.48529	1	4884	4884		52.937	18.764	1	115420			13917	10170	9556	9565	16012	16012	132;133				-0.09554333402388693
HDAGVQCIPHC	11	2 Carbamidomethyl (C)	_HDAGVQC(Carbamidomethyl (C))IPHC(Carbamidomethyl (C))_					0	2	0		ENST00000336308.9_1_17:37814089-37814275:+|nuORF	ENST00000336308.9_1_17:37814089-37814275:+|nuORF	ENST00000336308.9_1_17:37814089-37814275:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	647.276789	1292.53902	-0.67855	-0.00043921	-1.2397	-0.00080246	-1.9183	-0.0012417	647.2759194833806	54.959	0.39653	54.959	54.742	55.139	0	0.064407	0.0014557	NaN	52.937	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104360			13918	10170	9556	9565			132;133				-0.09554333402388693
HDAGVQCIPHC	11	2 Carbamidomethyl (C)	_HDAGVQC(Carbamidomethyl (C))IPHC(Carbamidomethyl (C))_					0	2	0		ENST00000336308.9_1_17:37814089-37814275:+|nuORF	ENST00000336308.9_1_17:37814089-37814275:+|nuORF	ENST00000336308.9_1_17:37814089-37814275:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	647.276789	1292.53902	0.048215	3.1209E-05	-2.1005	-0.0013596	-2.0522	-0.0013284	647.2755127028353	54.898	0.73608	54.891	54.385	55.121	-0.0077095	-0.0040089	0.00034144	NaN	52.937	30	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144590			13919	10170	9556	9565			132;133				-0.09554333402388693
HDAGVQCIPHC	11	2 Carbamidomethyl (C)	_HDAGVQC(Carbamidomethyl (C))IPHC(Carbamidomethyl (C))_					0	2	0		ENST00000336308.9_1_17:37814089-37814275:+|nuORF	ENST00000336308.9_1_17:37814089-37814275:+|nuORF	ENST00000336308.9_1_17:37814089-37814275:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	647.276789	1292.53902	1.5194	0.00098349	-3.6597	-0.0023689	-2.1403	-0.0013854	647.7761439403903	54.945	0.50468	55	54.614	55.119	0.055614	0.1054	-0.0016771	NaN	52.937	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134350			13920	10170	9556	9565			132;133				-0.09554333402388693
HDAGVQCIPHC	11	2 Carbamidomethyl (C)	_HDAGVQC(Carbamidomethyl (C))IPHC(Carbamidomethyl (C))_					0	2	0		ENST00000336308.9_1_17:37814089-37814275:+|nuORF	ENST00000336308.9_1_17:37814089-37814275:+|nuORF	ENST00000336308.9_1_17:37814089-37814275:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	647.276789	1292.53902	0.52907	0.00034246	-2.3922	-0.0015484	-1.8632	-0.001206	647.2751194188561	54.733	0.20285	54.824	54.664	54.867	0.091167	-0.070814	-3.6266E-05	NaN	52.937	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	192200			13921	10170	9556	9565			132;133				-0.09554333402388693
HDAGVRKD	8	Unmodified	_HDAGVRKD_					0	0	0			REV__ENST00000471189.5_1_3:48636563-48638429:-|nuORF	REV__ENST00000471189.5_1_3:48636563-48638429:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2308044433594	2	449.230491	896.446428	0.61452	0.00027606	-0.40863	-0.00018357	0.20588	9.249E-05	449.2302672922752	83.471	4.8977	83.402	80.905	85.803	-0.069313					227	113	3	0	0	0	0.89043	1	8509	8509		35.618	6.4687	1	260170	+		13922	27227	9557	9566	16013	16013					-0.0059372708195724044
HDALIQGRS	9	Unmodified	_HDALIQGRS_					0	0	0			REV__ENST00000333213.10_1_17:73512940-73517507:+|nuORF	REV__ENST00000333213.10_1_17:73512940-73517507:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.76519775390625	2	498.764697	995.514842	0.054896	2.738E-05	-0.12263	-6.1165E-05	-0.067738	-3.3785E-05	498.7644275162763	19.715	0.5517	19.085	18.892	19.443	-0.62961					17	11	2	0	0	0	0.69624	1	568	568		40.778	1.5253	1	123670	+		13923	25146	9558	9567	16014	16014					0.016905174979115145
HDDAHAEMPDD	11	Unmodified	_HDDAHAEMPDD_					0	0	0		ENSG00000177432|ENST00000323061|NAP1L5	ENSG00000177432|ENST00000323061|NAP1L5	ENSG00000177432|ENST00000323061|NAP1L5	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.7297973632812	2	626.730391	1251.44623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.733	1	32.744	32.244	33.244	0.010899								0	0	0	0.56276	1	1852	1852		18.262	0	1				13924	7139	9559	9568	16015	16015					-0.16943559654782803
HDEPAFWSIQ	10	Unmodified	_HDEPAFWSIQ_					0	0	0			REV__nc|ENSG00000174953|Q9H2U1-3|DHX36	REV__nc|ENSG00000174953|Q9H2U1-3|DHX36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	410.524658203125	3	410.524372	1228.55129	-0.15788	-6.4814E-05	3.5909	0.0014742	3.4331	0.0014094	410.5257114016994	56.503	1.144	56.49	56.243	57.387	-0.012203					108	46	3	0	0	0	0.86444	1	5065	5065		10.104	0	1	1981300	+		13925	22030	9560	9569	16016	16016					-0.053846503960585324
HDEPIVLRTR	10	Unmodified	_HDEPIVLRTR_					0	0	0		ENSG00000103888|ENST00000394685|CEMIP;nc|ENSG00000103888|Q8WUJ3-2|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	618.3460693359375	2	618.346386	1234.67822	1.2492	0.00077242	-2.1265	-0.0013149	-0.8773	-0.00054247	618.344978551102	97.744	3.3917	97.971	96.779	100.17	0.22787					230	79	4	0	0	0	0.86348	1	10079	10079		31.53	4.4825	1	960930			13926	2104	9561	9570	16017	16017					0.07026695548938733
HDFKRLPLARI	11	Unmodified	_HDFKRLPLARI_					0	0	0			REV__ENST00000367142.4_1_1:205693083-205719238:-|nuORF	REV__ENST00000367142.4_1_1:205693083-205719238:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.9398498535156	3	455.941973	1364.80409	0.06556	2.9892E-05	-2.0702	-0.00094391	-2.0047	-0.00091402	455.9409520747392	20.478	1.0774	20.019	19.595	20.672	-0.4591					64	24	5	0	0	0	0.77511	1	651	651		16.53	0	1	101920	+		13927	25552	9562	9571	16018	16018					0.13627827125037584
HDGTPAESM	9	Unmodified	_HDGTPAESM_					0	0	0			REV__ENSG00000119681|ENST00000261978|LTBP2	REV__ENSG00000119681|ENST00000261978|LTBP2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.6919860839844	2	472.692549	943.370546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.354	1	33.4	32.9	33.9	0.045849								0	0	0	0.32159	1	1611	1611		23.042	2.0956	1		+		13928	18367	9563	9572	16019	16019					-0.10340492044406346
HDGWGAGL	8	Unmodified	_HDGWGAGL_					0	0	0			REV__ENSG00000168056|ENST00000301873|LTBP3	REV__ENSG00000168056|ENST00000301873|LTBP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.6885681152344	2	406.687927	811.361301	-0.34816	-0.00014159	0.34253	0.0001393	-0.0056313	-2.2902E-06	406.68825238333864	28.588	1.0784	28.548	28.208	29.286	-0.039907					55	34	2	0	0	0	0.81548	1	1445	1445		20.482	0	1	78040	+		13929	21455	9564	9573	16020	16020					-0.05192472547764737
HDKSKLVPL	9	Unmodified	_HDKSKLVPL_					0	0	0			REV__chr12:15143708-15217429|20|11.7|0.41|4.84|-|1|TE_info:L2a,L2a_dup119657,L2,LINE,acceptor,-,15143576,15143708|None,RERG|1	REV__chr12:15143708-15217429|20|11.7|0.41|4.84|-|1|TE_info:L2a,L2a_dup119657,L2,LINE,acceptor,-,15143576,15143708|None,RERG|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8112182617188	2	518.811116	1035.60768	2.0333	0.0010549	-3.5591	-0.0018465	-1.5258	-0.00079161	518.8092333336378	100.03	1.6601	100.36	99.811	101.47	0.33295					136	41	4	0	0	0	0.51307	1	12167	12167		51.335	0	1	17274000	+		13930	15519	9565	9574	16021	16021					0.09130022231261137
HDLHCYINL	9	Unmodified	_HDLHCYINL_					0	0	0			REV__ENSG00000113318|ENST00000265081|MSH3	REV__ENSG00000113318|ENST00000265081|MSH3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.35986328125	2	564.268758	1126.52296	0.83333	0.00047022	4.4465	0.002509	5.2799	0.0029793	564.2713056148423	66.922	0.43599	67.307	67.123	67.559	0.38515					23	13	3	0	0	0	0.20789	1	7334	7334		29.15	0	1	241730	+		13931	17990	9566	9575	16022	16022					-0.03523671576999732
HDLMKALL	8	Unmodified	_HDLMKALL_					0	0	0			REV__ENST00000535141.6_1_15:66807891-66811221:+|nuORF	REV__ENST00000535141.6_1_15:66807891-66811221:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	471.26751708984375	2	470.767863	939.521173	-1.0221	-0.00048115	3.6733	0.0017293	2.6512	0.0012481	470.76946116999153	50.688	1.1627	50.718	50.343	51.506	0.029629					82	35	3	0	0	0	0.86288	1	4060	4060		26.796	2.5934	1	1717600	+		13932	28379	9567	9576	16023	16023					0.04899319405069491
HDNSSKWAPP	10	Unmodified	_HDNSSKWAPP_					0	0	0			REV__ENSG00000132768|ENST00000255108|DPH2	REV__ENSG00000132768|ENST00000255108|DPH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.7680053710938	2	569.767437	1137.52032	-0.43126	-0.00024572	-1.2392	-0.00070607	-1.6705	-0.00095179	569.7664979686036	61.142	0.35186	61.15	60.88	61.231	0.0081177					39	16	3	0	0	0	0.70553	1	5325	5325		44.377	3.599	1	679420	+		13933	19029	9568	9577	16024	16024					-0.04293803710288557
HDPLHRPQSK	10	Unmodified	_HDPLHRPQSK_					0	0	0			REV__ENSG00000177992|ENST00000325643|SPATA31E1	REV__ENSG00000177992|ENST00000325643|SPATA31E1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5517883300781	3	405.551144	1213.6316	0.048012	1.9471E-05	0.0011887	4.8207E-07	0.049201	1.9953E-05	405.55112675240923	24.685	0.42493	24.786	24.58	25.005	0.10045					31	20	2	0	0	0	0.86621	1	861	861		31.068	5.0048	1	62701	+		13934	22244	9569	9578	16025	16025					0.03333255717643624
HDRIIKKRR	9	Unmodified	_HDRIIKKRR_					0	0	0			REV__nc|ENSG00000276234|O75478-2|TADA2A	REV__nc|ENSG00000276234|O75478-2|TADA2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3551635742188	2	611.38618	1220.75781	2.3811	0.0014558	0.76726	0.00046909	3.1484	0.0019249	611.3869993005572	95.841	0.6855	95.784	95.51	96.196	-0.057526					20	15	2	0	0	0	0.20789	1	10312	10312		15.642	0	1	72928	+		13935	24018	9570	9579	16026	16026					0.1562580701358911
HDRLISLCLTL	11	Unmodified	_HDRLISLCLTL_					0	0	0		ENSG00000122687|ENST00000242257|MRM2;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;ENST00000486040.1_1_7:2274759-2277695:-|nuORF	ENSG00000122687|ENST00000242257|MRM2	ENSG00000122687|ENST00000242257|MRM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3673706054688	2	642.360647	1282.70674	2.0845	0.001339	1.8317	0.0011766	3.9162	0.0025156	642.361819653108	110.23	1.6844	110.29	109.66	111.35	0.054062					109	58	2	0	0	0	0.65746	1	13290	13290		37.812	0	1	2848100			13936	3239	9571	9580	16027	16027					0.07669677133867481
HDSDCGSS	8	Unmodified	_HDSDCGSS_					0	0	0			REV__nc|ENSG00000157890|A6BM72-3|MEGF11	REV__nc|ENSG00000157890|A6BM72-3|MEGF11	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.1329650878906	2	404.132324	806.250096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.47	1	118.49	117.99	118.99	0.026466								0	0	0	0.30784	1	13036	13036		14.664	0.88877	1		+		13937	15620	9572	9581	16028	16028					-0.16077900038010284
HDTIDRNAF	9	Unmodified	_HDTIDRNAF_					0	0	0			REV__ENSG00000134250|ENST00000256646|NOTCH2;REV__ENSG00000148400|ENST00000651671|NOTCH1	REV__ENSG00000134250|ENST00000256646|NOTCH2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.7587280273438	2	544.759612	1087.50467	-1.6839	-0.00091731	1.9049	0.0010377	0.22106	0.00012043	544.7604414706941	20.63	0.56047	20.63	20.424	20.985	0					56	26	3	0	0	0	0.7932	1	522	522		24.203	1.6231	1	129540	+		13938	19125;20116	9573	9582	16029	16029					-0.03558090227329558
HEAERNIAL	9	Unmodified	_HEAERNIAL_					0	0	0		ENSG00000183054|ENST00000329516|RGPD6;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000015568|ENST00000016946|RGPD5;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000196862|ENST00000408999|RGPD4;ENSG00000153165|ENST00000409886|RGPD3;nc|ENSG00000196862|Q7Z3J3-2|RGPD4;ENSG00000153201|ENST00000283195|RANBP2	ENSG00000183054|ENST00000329516|RGPD6;ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.77734375	2	526.777805	1051.54106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.212	1	31.292	30.792	31.792	0.079834								0	0	0	0.048994	1	2096	2096		87.696	13.441	1				13939	5220;825	9574	9583	16030	16030					0.0173478666936262
HEAERNIAL	9	Unmodified	_HEAERNIAL_					0	0	0		ENSG00000183054|ENST00000329516|RGPD6;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000015568|ENST00000016946|RGPD5;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000196862|ENST00000408999|RGPD4;ENSG00000153165|ENST00000409886|RGPD3;nc|ENSG00000196862|Q7Z3J3-2|RGPD4;ENSG00000153201|ENST00000283195|RANBP2	ENSG00000183054|ENST00000329516|RGPD6;ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7774047851562	2	526.777805	1051.54106	0.48741	0.00025675	-0.75545	-0.00039795	-0.26804	-0.0001412	526.777357248721	31.164	1.1613	31.168	30.623	31.784	0.0037193					53	26	3	0	0	0	0.029359	4	2102	2091;2102;2115;2129		118.74	44.488	1	1272900			13940	5220;825	9574	9583	16031;16032;16033;16034	16032					0.0173478666936262
HEAEVLKQL	9	Unmodified	_HEAEVLKQL_					0	0	0		ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;ENSG00000117632|ENST00000455785|STMN1;nc|ENSG00000117632|P16949-2|STMN1	ENST00000465604.1_1_1:26227509-26228203:-|nuORF	ENST00000465604.1_1_1:26227509-26228203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.7977294921875	2	533.798206	1065.58186	0.20356	0.00010866	-0.19135	-0.00010214	0.012209	6.517E-06	533.7978599429359	39.013	1.3061	38.982	38.583	39.889	-0.03027					62	30	3	0	0	0	0.029359	6	2678	2655;2666;2678;2690;2702;2717		118.74	35.455	1	454090			13941	2993	9575	9584	16035;16036;16037;16038;16039;16040	16037					0.05169127988983746
HEAEVLKQL	9	Unmodified	_HEAEVLKQL_					0	0	0		ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;ENSG00000117632|ENST00000455785|STMN1;nc|ENSG00000117632|P16949-2|STMN1	ENST00000465604.1_1_1:26227509-26228203:-|nuORF	ENST00000465604.1_1_1:26227509-26228203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.798095703125	2	533.798206	1065.58186	-0.53486	-0.00028551	0.4856	0.00025921	-0.049257	-2.6293E-05	533.7982996473613	38.841	1.1106	38.794	38.465	39.576	-0.047001					58	25	3	0	0	0	0.017216	6	2751	2727;2736;2751;2763;2775;2789		127.46	47.294	1	583460			13942	2993	9575	9584	16041;16042;16043;16044;16045;16046	16043					0.05169127988983746
HEAEVLKQL	9	Unmodified	_HEAEVLKQL_					0	0	0		ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;ENSG00000117632|ENST00000455785|STMN1;nc|ENSG00000117632|P16949-2|STMN1	ENST00000465604.1_1_1:26227509-26228203:-|nuORF	ENST00000465604.1_1_1:26227509-26228203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.7979736328125	2	533.798206	1065.58186	-1.1331	-0.00060485	1.1262	0.00060115	-0.0069299	-3.6992E-06	533.7986782783494	38.833	1.1555	38.844	38.447	39.602	0.011173					68	26	4	0	0	0	5.5105E-05	6	2702	2666;2679;2690;2702;2714;2734		148.99	51.249	1	506560			13943	2993	9575	9584	16047;16048;16049;16050;16051;16052	16050					0.05169127988983746
HEAEVLKQL	9	Unmodified	_HEAEVLKQL_					0	0	0		ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;ENSG00000117632|ENST00000455785|STMN1;nc|ENSG00000117632|P16949-2|STMN1	ENST00000465604.1_1_1:26227509-26228203:-|nuORF	ENST00000465604.1_1_1:26227509-26228203:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	533.798206	1065.58186	-0.13705	-7.3155E-05	0.044566	2.3789E-05	-0.092479	-4.9365E-05	533.7980485075839	38.317	0.59705	38.659	38.341	38.938	0.34187	-0.16079	-0.0005997	NaN	148.99	26	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185370			13944	2993	9575	9584							0.05169127988983746
HEAKRARGPE	10	Unmodified	_HEAKRARGPE_					0	0	0		chr16:29799781-29799961|18|12.89|0.22|5.87|+|2|KIF22,KIF22|1	chr16:29799781-29799961|18|12.89|0.22|5.87|+|2|KIF22,KIF22|1	chr16:29799781-29799961|18|12.89|0.22|5.87|+|2|KIF22,KIF22|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3698120117188	2	575.807428	1149.6003	-1.9431	-0.0011189	-3.1204	-0.0017968	-5.0635	-0.0029156	575.8055357035673	41.383	0.42941	42.017	41.814	42.244	0.6339					15	11	2	0	0	0	0.37624	1	3635	3635		24.519	13.654	1	603940			13945	205	9576	9585	16053	16053					0.03148682683581683
HEAVDQQI	8	Unmodified	_HEAVDQQI_					0	0	0			REV__ENSG00000104953|ENST00000246112|TLE6	REV__ENSG00000104953|ENST00000246112|TLE6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.72991943359375	2	470.230156	938.445759	-0.5895	-0.0002772	0.82529	0.00038808	0.23579	0.00011088	470.2304404672262	21.106	0.55865	20.478	20.162	20.721	-0.62834					29	14	3	0	0	0	0.89043	1	758	758		35.618	2.8059	1	86765	+		13946	17490	9577	9586	16054	16054					-0.025925665216618654
HECGRVGPGHT	11	Unmodified	_HECGRVGPGHT_					0	0	0		nc|ENSG00000166689|Q6IQ23|PLEKHA7;nc|ENSG00000166689|Q6IQ23-2|PLEKHA7;ENSG00000166689|ENST00000531066|PLEKHA7	nc|ENSG00000166689|Q6IQ23|PLEKHA7	nc|ENSG00000166689|Q6IQ23|PLEKHA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.261474609375	2	575.264539	1148.51452	-0.11125	-6.3997E-05	-4.1381	-0.0023805	-4.2493	-0.0024445	575.2619132987035	30.32	0.56896	30.23	30.004	30.573	-0.089546					31	12	3	0	0	0	0.41466	1	1999	1999		58.23	1.5089	1	487690			13947	6221	9578	9587	16055	16055					-0.05379225493629747
HEEDYLDSTL	10	Unmodified	_HEEDYLDSTL_					0	0	0		nc|ENSG00000013374|Q9Y5A7-2|NUB1;ENSG00000013374|ENST00000568733|NUB1	nc|ENSG00000013374|Q9Y5A7-2|NUB1	nc|ENSG00000013374|Q9Y5A7-2|NUB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.2672729492188	2	611.267133	1220.51971	0.78636	0.00048067	-0.40514	-0.00024765	0.38121	0.00023302	611.266843148683	56.824	0.6762	57.379	57.049	57.725	0.55512					32	15	3	0	0	0	0.20477	1	5888	5888		84.916	35.474	1	790100			13948	809	9579	9588	16056	16056					-0.08172687940668766
HEESREYSL	9	Unmodified	_HEESREYSL_					0	0	0		ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.262451171875	2	575.262185	1148.50982	-1.561	-0.00089796	1.5111	0.00086927	-0.049882	-2.8695E-05	575.2628972634592	30.183	0.92999	30.212	29.92	30.85	0.028618					43	20	3	0	0	0	0.07589	2	1963	1953;1963		98.629	23.586	1	472210			13949	6887	9580	9589	16057;16058	16058					-0.05849831155364882
HEESREYSL	9	Unmodified	_HEESREYSL_					0	0	0		ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.260986328125	2	575.262185	1148.50982	-0.11125	-6.3997E-05	-0.045827	-2.6362E-05	-0.15708	-9.036E-05	575.2619132987035	30.32	0.56896	30.23	30.004	30.573	-0.089546					31	12	3	0	0	0	0.28163	1	1988	1988		66.429	3.123	1	487690			13950	6887	9580	9589	16059	16059					-0.05849831155364882
HEFEQVKKK	9	Unmodified	_HEFEQVKKK_					0	0	0			REV__nc|ENSG00000170004|Q12873-3|CHD3	REV__nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	586.8233032226562	2	586.824755	1171.63496	-0.35782	-0.00020998	-1.4226	-0.0008348	-1.7804	-0.0010448	586.8237768221713	110.28	1.7008	110.31	110.06	111.76	0.031738					152	59	5	0	0	0	0.78058	1	12090	12090		30.504	0.18592	1	6766000	+		13951	30022	9581	9590	16060	16060					0.05600505771644748
HEGERQEPR	9	Unmodified	_HEGERQEPR_					0	0	0		nc|ENSG00000167395|O15015-1|ZNF646;ENSG00000167395|ENST00000300850|ZNF646	nc|ENSG00000167395|O15015-1|ZNF646	nc|ENSG00000167395|O15015-1|ZNF646	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.2749633789062	2	569.273418	1136.53228	0.087819	4.9993E-05	2.2403	0.0012754	2.3282	0.0013254	569.2748918434346	58.626	0.62676	58.595	58.209	58.836	-0.030888					43	19	3	0	0	0	0.44421	1	5458	5458		54.776	15.523	1	198820			13952	6291	9582	9591	16061	16061					-0.030521869671019886
HEGGPDSKL	9	Unmodified	_HEGGPDSKL_					0	0	0		nc|ENSG00000116580|Q3T8J9-3|GON4L;ENSG00000116580|ENST00000368331|GON4L	nc|ENSG00000116580|Q3T8J9-3|GON4L	nc|ENSG00000116580|Q3T8J9-3|GON4L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.231689453125	2	470.230156	938.445759	0.6251	0.00029394	-0.27889	-0.00013114	0.34621	0.0001628	470.22981445621735	20.87	0.75568	20.411	20.053	20.809	-0.4591					32	17	3	0	0	0	0.48102	2	707	700;707		52.937	15.778	1	77306			13953	2927	9583	9592	16062;16063	16063					-0.025925665216618654
HEGIKSKLSD	10	Unmodified	_HEGIKSKLSD_					0	0	0		ENST00000527224.1_1_11:65837957-65984297:+|nuORF;ENSG00000175115|ENST00000320580|PACS1;nc|ENSG00000175115|Q6VY07-2|PACS1	ENST00000527224.1_1_11:65837957-65984297:+|nuORF	ENST00000527224.1_1_11:65837957-65984297:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	556.3064575195312	2	557.29857	1112.58259	-0.59793	-0.00033323	-4.4446	-0.002477	-5.0425	-0.0028102	557.2959504689413	90.764	1.0988	90.764	90.087	91.185	0					45	25	2	0	0	0	0.37624	1	8818	8818		33.922	6.0394	1	53224			13954	6991	9584	9593	16064	16064					0.030799226380622713
HEGITILVRR	10	Unmodified	_HEGITILVRR_					0	0	0		nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2;ENSG00000188559|ENST00000202677|RALGAPA2	nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.3582153320312	2	597.359296	1192.70404	0.89294	0.00053341	-2.814	-0.001681	-1.921	-0.0011475	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.86471	1	10521	10521		30.318	8.3578	1	2674200			13955	7936	9585	9594	16065	16065					0.11539589791209437
HEHEQENEL	9	Unmodified	_HEHEQENEL_					0	0	0		ENSG00000135090|ENST00000392533|TAOK3	ENSG00000135090|ENST00000392533|TAOK3	ENSG00000135090|ENST00000392533|TAOK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.249267578125	2	582.749441	1163.48433	0.092266	5.3768E-05	-0.14722	-8.5793E-05	-0.054955	-3.2025E-05	582.7491558841364	24.01	0.48651	23.964	23.68	24.167	-0.04598					19	11	2	0	0	0	0.7932	1	914	914		26.693	0	1	28101			13956	3981	9586	9595	16066	16066					-0.0908730567780367
HEIEALKSF	9	Unmodified	_HEIEALKSF_					0	0	0		ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	ENSG00000078618|ENST00000352171|NRDC	ENSG00000078618|ENST00000352171|NRDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	537.2844848632812	2	537.284931	1072.55531	0.16798	9.0251E-05	-0.71891	-0.00038626	-0.55093	-0.00029601	537.284482937903	45.57	0.7519	45.551	45.187	45.939	-0.018585					38	17	3	0	0	0	0.039957	3	3601	3589;3601;3614		112.41	26.163	1	328280			13957	1403	9587	9596	16067;16068;16069	16068					0.021934390976412033
HEIEALKSF	9	Unmodified	_HEIEALKSF_					0	0	0		ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	ENSG00000078618|ENST00000352171|NRDC	ENSG00000078618|ENST00000352171|NRDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.285400390625	2	537.284931	1072.55531	-0.16751	-9.0003E-05	-0.40492	-0.00021756	-0.57243	-0.00030756	537.2846468978354	45.461	0.86666	45.43	45.104	45.97	-0.031067					42	19	3	0	0	0	0.026116	3	3684	3671;3684;3697		120.87	54.439	1	327870			13958	1403	9587	9596	16070;16071;16072	16071					0.021934390976412033
HEIEALKSF	9	Unmodified	_HEIEALKSF_					0	0	0		ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	ENSG00000078618|ENST00000352171|NRDC	ENSG00000078618|ENST00000352171|NRDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.2841186523438	2	537.284931	1072.55531	0.093742	5.0366E-05	-0.58417	-0.00031387	-0.49043	-0.0002635	537.2845099354994	45.442	0.8454	45.438	45.143	45.989	-0.0041618					41	19	3	0	0	0	0.065196	3	3610	3610;3622;3640		101.6	42.819	1	293730			13959	1403	9587	9596	16073;16074;16075	16073					0.021934390976412033
HEILAQPT	8	Unmodified	_HEILAQPT_					0	0	0		ENSG00000213892|ENST00000587331|CEACAM16	ENSG00000213892|ENST00000587331|CEACAM16	ENSG00000213892|ENST00000587331|CEACAM16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.7450866699219	2	454.745442	907.476331	1.0531	0.00047889	-2.1634	-0.00098381	-1.1103	-0.00050492	454.74431898752607	103.74	1.4301	103.79	103.32	104.75	0.041489					80	34	3	0	0	0	0.88915	1	11324	11324		35.201	4.6971	1	827910			13960	8604	9588	9597	16076	16076					0.01889211863363016
HEKARLDSP	9	Unmodified	_HEKARLDSP_					0	0	0			REV__nc|ENSG00000124920|Q9Y2G1-2|MYRF	REV__nc|ENSG00000124920|Q9Y2G1-2|MYRF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.7772827148438	2	526.777805	1051.54106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.312	1	31.392	30.892	31.892	0.079834								0	0	0	0.41698	1	2110	2110		56.721	1.2168	1		+		13961	18622	9589	9598	16077	16077					0.0173478666936262
HEKFRQFHH	9	Unmodified	_HEKFRQFHH_					0	0	0			REV__ENST00000554429.5_1_14:45565874-45579180:+|nuORF	REV__ENST00000554429.5_1_14:45565874-45579180:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.55029296875	3	422.547734	1264.62137	1.0448	0.00044147	3.772	0.0015938	4.8168	0.0020353	422.54937475486224	22.6	0.68582	22.181	21.924	22.61	-0.41879					33	15	3	0	0	0	0.78528	1	934	934		29.17	3.1067	1	219190	+		13962	22750	9590	9599	16078	16078					-0.0003530721692186489
HEKKVHRSI	9	Unmodified	_HEKKVHRSI_					0	0	0			REV__ENSG00000147432|ENST00000289957|CHRNB3	REV__ENSG00000147432|ENST00000289957|CHRNB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.328857421875	2	567.330539	1132.64652	0.4851	0.00027521	-1.8618	-0.0010563	-1.3767	-0.00078107	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.76255	1	9830	9830		35.618	6.4687	1	18558000	+		13963	20070	9591	9600	16079	16079					0.0855074758567298
HEKKVKKLQTD	11	Unmodified	_HEKKVKKLQTD_					0	0	0		ENSG00000230561|ENST00000514853|CCDC192;nc|ENSG00000230561|P0DO97|CCDC192	ENSG00000230561|ENST00000514853|CCDC192	ENSG00000230561|ENST00000514853|CCDC192	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.93255615234375	3	451.933143	1352.7776	-0.13819	-6.2454E-05	-0.95476	-0.00043149	-1.093	-0.00049394	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.72892	1	10781	10781		26.75	4.1881	1	924270			13964	8730	9592	9601	16080	16080					0.1153209344302013
HEKKVKKLQTD	11	Unmodified	_HEKKVKKLQTD_					0	0	0		ENSG00000230561|ENST00000514853|CCDC192;nc|ENSG00000230561|P0DO97|CCDC192	ENSG00000230561|ENST00000514853|CCDC192	ENSG00000230561|ENST00000514853|CCDC192	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9320983886719	3	451.933143	1352.7776	-1.7713	-0.0008005	0.78925	0.00035669	-0.98202	-0.00044381	451.93340802352935	100.57	2.3737	100.74	99.884	102.26	0.17199					164	56	4	0	0	0	0.75121	1	10534	10534		21.78	3.9473	1	618930			13965	8730	9592	9601	16081	16081					0.1153209344302013
HEKQALKMVVT	11	Unmodified	_HEKQALKMVVT_					0	0	0			REV__ENST00000565062.5_1_16:90097706-90103159:+|nuORF	REV__ENST00000565062.5_1_16:90097706-90103159:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3645629882812	2	642.360647	1282.70674	-0.042196	-2.7105E-05	3.5918	0.0023072	3.5496	0.0022801	642.3635952564791	110.33	1.0043	110.28	110.08	111.09	-0.055077					98	36	3	0	0	0	0.69995	1	11982	11982		31.53	2.3598	1	348750	+		13966	19656	9593	9602	16082	16082					0.07669677133844743
HELFRHGILLI	11	Unmodified	_HELFRHGILLI_					0	0	0		ENSG00000131951|ENST00000570145|LRRC9;nc|ENSG00000131951|Q6ZRR7-2|LRRC9;nc|ENSG00000131951|Q6ZRR7|LRRC9	ENSG00000131951|ENST00000570145|LRRC9	ENSG00000131951|ENST00000570145|LRRC9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2593078613281	3	449.934706	1346.78229	-1.1677	-0.0005254	-0.68269	-0.00030717	-1.8504	-0.00083257	449.9337449525673	70.79	0.20312	70.866	70.772	70.975	0.076225					14	9	2	0	0	0	0.17606	1	6403	6403		25.126	12.169	1	38100			13967	3756	9594	9603	16083	16083					0.12277022376474633
HELFRHGILLI	11	Unmodified	_HELFRHGILLI_					0	0	0		ENSG00000131951|ENST00000570145|LRRC9;nc|ENSG00000131951|Q6ZRR7-2|LRRC9;nc|ENSG00000131951|Q6ZRR7|LRRC9	ENSG00000131951|ENST00000570145|LRRC9	ENSG00000131951|ENST00000570145|LRRC9	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	449.934706	1346.78229	0.48536	0.00021838	-1.1571	-0.0005206	-0.67171	-0.00030222	450.26953928645673	71.119	0.4697	71.248	70.995	71.465	0.12965	0.19122	-0.00033233	NaN	14.086	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51998			13968	3756	9594	9603							0.12277022376474633
HELGPIGILL	10	Unmodified	_HELGPIGILL_					0	0	0			REV__ENSG00000176895|ENST00000641490|OR51A7	REV__ENSG00000176895|ENST00000641490|OR51A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.3187866210938	2	531.321317	1060.62808	-1.5129	-0.00080386	-2.153	-0.0011439	-3.6659	-0.0019478	531.3198552399973	94.964	2.533	95.167	94.65	97.183	0.20242					171	59	5	0	0	0	0.86589	1	9629	9629		29.15	7.1897	1	2353400	+		13969	22152	9595	9604	16084	16084					0.10019192891104467
HELLERIGL	9	Unmodified	_HELLERIGL_					0	0	0		ENSG00000122122|ENST00000356892|SASH3	ENSG00000122122|ENST00000356892|SASH3	ENSG00000122122|ENST00000356892|SASH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.313232421875	2	540.314023	1078.61349	-1.3123	-0.00070903	1.285	0.0006943	-0.027262	-1.473E-05	540.3145600020765	57.137	1.2845	57.533	57.159	58.443	0.39565					59	31	4	0	0	0	0.029359	4	5917	5905;5917;5930;5944		118.74	33.582	1	1609900			13970	3210	9596	9605	16085;16086;16087;16088	16086					0.07733120742932442
HELLERIGL	9	Unmodified	_HELLERIGL_					0	0	0		ENSG00000122122|ENST00000356892|SASH3	ENSG00000122122|ENST00000356892|SASH3	ENSG00000122122|ENST00000356892|SASH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.3135375976562	2	540.314023	1078.61349	0.14934	8.069E-05	-0.20238	-0.00010935	-0.053037	-2.8656E-05	540.3137285214555	57.012	0.93544	57.568	57.181	58.116	0.55512					44	22	3	0	0	0	0.18338	3	5911	5902;5911;5930		77.318	16.346	1	1484600			13971	3210	9596	9605	16089;16090;16091	16090					0.07733120742932442
HELLGHVPLF	10	Unmodified	_HELLGHVPLF_					0	0	0		ENSG00000171759|ENST00000553106|PAH	ENSG00000171759|ENST00000553106|PAH	ENSG00000171759|ENST00000553106|PAH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.3213500976562	2	581.324391	1160.63423	-0.86869	-0.00050499	0.84982	0.00049402	-0.018867	-1.0968E-05	581.3247028868919	63.922	0.69054	63.922	63.65	64.341	-0.00078583					66	24	3	0	0	0	0.86452	1	5937	5937		30.504	2.6214	1	377210			13972	6705	9597	9606	16092	16092					0.06033711122586283
HELSLPRSN	9	Unmodified	_HELSLPRSN_					0	0	0			REV__ENST00000461023.5_1_16:343426-396314:-|nuORF	REV__ENST00000461023.5_1_16:343426-396314:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.7772827148438	2	526.777805	1051.54106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.117	1	31.196	30.696	31.696	0.079834								0	0	0	0.034797	1	2083	2083		98.629	21.312	1		+		13973	17389	9598	9607	16093	16093					0.0173478666936262
HELWLLIKR	9	Unmodified	_HELWLLIKR_					0	0	0		ENSG00000187527|ENST00000342358|ATP13A5	ENSG00000187527|ENST00000342358|ATP13A5	ENSG00000187527|ENST00000342358|ATP13A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3668212890625	2	604.369133	1206.72371	-0.48563	-0.0002935	-3.9352	-0.0023783	-4.4209	-0.0026718	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.78058	1	11574	11574		30.504	0.18592	1	63350000			13974	7857	9599	9608	16094	16094					0.12861965801971564
HEPAFGGLIK	10	Unmodified	_HEPAFGGLIK_					0	0	0			REV__ENSG00000174292|ENST00000688331|TNK1	REV__ENSG00000174292|ENST00000688331|TNK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.79541015625	2	534.795466	1067.57638	-1.1915	-0.0006372	1.0488	0.00056091	-0.14265	-7.629E-05	534.795990325514	58.027	0.62212	58.027	57.785	58.407	0					52	23	3	0	0	0	0.74274	1	5013	5013		42.396	3.1433	1	126740	+		13975	21983	9600	9609	16095	16095					0.045294491971844764
HEPGLTAQS	9	Unmodified	_HEPGLTAQS_					0	0	0			REV__ENSG00000100368|ENST00000403662|CSF2RB	REV__ENSG00000100368|ENST00000403662|CSF2RB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.2308654785156	2	470.230156	938.445759	0.6251	0.00029394	-0.27889	-0.00013114	0.34621	0.0001628	470.22981445621735	20.87	0.75568	20.411	20.053	20.809	-0.4591					32	17	3	0	0	0	0.69624	1	718	718		40.778	0	1	77306	+		13976	17183	9601	9610	16096	16096					-0.02592566521673234
HEPHKGNKY	9	Unmodified	_HEPHKGNKY_					0	0	0			REV__ENSG00000131023|ENST00000543571|LATS1	REV__ENSG00000131023|ENST00000543571|LATS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.2747802734375	2	555.277972	1108.54139	-0.45643	-0.00025344	-1.7896	-0.00099375	-2.2461	-0.0012472	555.2767135687351	41.67	0.44784	41.639	41.421	41.868	-0.030991					26	10	3	0	0	0	0.51307	1	3070	3070		51.335	3.6781	1	427350	+		13977	18930	9602	9611	16097	16097					-0.008537936107586575
HEQLTRLE	8	Unmodified	_HEQLTRLE_					0	0	0			REV__ENSG00000133030|ENST00000651222|MPRIP	REV__ENSG00000133030|ENST00000651222|MPRIP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2836303710938	2	513.272355	1024.53016	-1.5248	-0.00078266	-4.392	-0.0022543	-5.9168	-0.0030369	513.270037265139	86.91	1.7937	87.074	85.939	87.733	0.16473					59	41	2	0	0	0	0.4196	1	8419	8419		30.504	0	1	76888	+		13978	19051	9603	9612	16098	16098					0.01887384295105221
HERAPFSPI	9	Unmodified	_HERAPFSPI_					0	0	0			REV__ENST00000448587.5_2_19:5560846-5561215:-|nuORF	REV__ENST00000448587.5_2_19:5560846-5561215:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.7772216796875	2	527.277441	1052.54033	-0.25287	-0.00013333	3.4177	0.0018021	3.1649	0.0016688	527.279376546994	31.204	0.92291	31.284	30.678	31.601	0.079834					30	20	2	0	0	0	0.20789	1	2072	2072		39.253	11.371	1	440440	+		13979	26841	9604	9613	16099	16099					0.016159920203108413
HEREKTVKTLL	11	Unmodified	_HEREKTVKTLL_					0	0	0			REV__nc|ENSG00000119283|Q6ZTA4-2|TRIM67	REV__nc|ENSG00000119283|Q6ZTA4-2|TRIM67	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9324951171875	3	451.933143	1352.7776	1.2214	0.000552	-2.2747	-0.001028	-1.0533	-0.000476	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.71803	1	10787	10787		28.577	0.93281	1	1043200	+		13980	18346	9605	9614	16100	16100					0.11532093443042868
HERRPWRIWFL	11	Unmodified	_HERRPWRIWFL_					0	0	0		ENSG00000213533|ENST00000355083|STIMATE	ENSG00000213533|ENST00000355083|STIMATE	ENSG00000213533|ENST00000355083|STIMATE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.9638671875	3	532.628388	1594.86333	3.4014	0.0018117	-0.67213	-0.000358	2.7293	0.0014537	532.6279567736465	110.77	1.1663	110.75	110.19	111.36	-0.026314					60	34	2	0	0	0	0.8398	1	12254	12254		6.6596	0.33873	1	422860			13981	8593	9606	9615	16101	16101					0.08969723139193775
HESAVTGLSL	10	Unmodified	_HESAVTGLSL_					0	0	0		ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.26678466796875	2	507.266739	1012.51892	-0.00014672	-7.4428E-08	2.6464	0.0013424	2.6462	0.0013423	507.2686442685549	51.245	1.1988	51.68	51.409	52.607	0.43505					40	28	2	0	0	0	0.77314	1	5090	5090		40.778	0.20554	1	1415200			13982	2513	9607	9616	16102	16102					0.013165622009523759
HESGASIKI	9	Unmodified	_HESGASIKI_					0	0	0		nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK;ENSG00000165119|ENST00000376263|HNRNPK	nc|ENSG00000165119|P61978-3|HNRNPK	nc|ENSG00000165119|P61978-3|HNRNPK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2560119628906	2	471.256174	940.497795	-0.96244	-0.00045355	0.69954	0.00032966	-0.2629	-0.00012389	471.2564956140925	29.771	2.7125	29.799	28.794	31.507	0.028618					148	61	5	0	0	0	0.0015479	5	1909	1869;1879;1897;1909;1940		143.89	53.11	1	7198000			13983	6049	9608	9617	16103;16104;16105;16106;16107	16106					0.025165968920987325
HESGASIKI	9	Unmodified	_HESGASIKI_					0	0	0		nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK;ENSG00000165119|ENST00000376263|HNRNPK	nc|ENSG00000165119|P61978-3|HNRNPK	nc|ENSG00000165119|P61978-3|HNRNPK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.25616455078125	2	471.256174	940.497795	-0.36059	-0.00016993	-0.0056518	-2.6634E-06	-0.36624	-0.0001726	471.2561536641347	29.907	2.3297	29.817	29.233	31.563	-0.089546					133	53	5	0	0	0	0.0080651	6	1921	1910;1921;1933;1945;1957;1969		134.81	40.804	1	8235200			13984	6049	9608	9617	16108;16109;16110;16111;16112;16113	16109					0.025165968920987325
HESGPDSTGPL	11	Unmodified	_HESGPDSTGPL_					0	0	0			REV__ENST00000325748.8_1_2:179315776-179315911:-|nuORF	REV__ENST00000325748.8_1_2:179315776-179315911:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.7505493164062	2	548.74891	1095.48327	-0.51946	-0.00028505	0.51413	0.00028213	-0.0053348	-2.9275E-06	548.7489963303229	54.358	0.79435	54.942	54.626	55.421	0.58474					42	18	3	0	0	0	0.5603	1	5552	5552		47.657	1.6851	1	862460	+		13985	25065	9609	9618	16114	16114					-0.0606552004671812
HESHELLLL	9	Unmodified	_HESHELLLL_					0	0	0		ENSG00000081014|ENST00000261842|AP4E1;nc|ENSG00000081014|Q9UPM8-2|AP4E1	ENSG00000081014|ENST00000261842|AP4E1	ENSG00000081014|ENST00000261842|AP4E1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.317138671875	2	545.798206	1089.58186	0.77166	0.00042117	-4.0199	-0.0021941	-3.2483	-0.0017729	545.7959509607731	92.439	2.0995	92.598	91.473	93.573	0.15875					71	49	2	0	0	0	0.20789	1	9375	9375		38.806	6.8513	1	135690			13986	1457	9610	9619	16115	16115					0.04065127988997119
HESRFKALEN	10	Unmodified	_HESRFKALEN_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	410.8714904785156	3	410.879038	1229.61528	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.38	1	116.38	115.88	116.88	0								0	0	0	0.45132	1	11935	11935		22.562	0	1		+		13987	20187	9611	9620	16116	16116					0.00966129760900003
HETKVRGG	8	Unmodified	_HETKVRGG_					0	0	0			REV__ENST00000487138.5_1_2:95940333-95943144:+|nuORF	REV__ENST00000487138.5_1_2:95940333-95943144:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24017333984375	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.80706	1	7154	7154		19.36	0	1	716910	+		13988	20413	9612	9621	16117	16117					0.021228632977113193
HETVKQKQKAT	11	Unmodified	_HETVKQKQKAT_					0	0	0			REV__nc|ENSG00000283228|O00305-4|CACNB4	REV__nc|ENSG00000283228|O00305-4|CACNB4	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	649.3639526367188	2	649.364776	1296.715	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.186	1	65.186	64.686	65.686	0								0	0	0	0.56276	1	5751	5751		22.58	3.4761	1		+		13989	22521	9613	9622	16118	16118					0.07850947374845418
HEVEEATNIL	10	Unmodified	_HEVEEATNIL_					0	0	0		ENST00000480906.5_1_3:195057651-195163594:-|nuORF;ENSG00000114331|ENST00000326793|ACAP2	ENST00000480906.5_1_3:195057651-195163594:-|nuORF	ENST00000480906.5_1_3:195057651-195163594:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	577.7886352539062	2	577.788035	1153.56152	-0.59206	-0.00034209	0.99836	0.00057684	0.4063	0.00023475	577.7883620028217	49.982	0.62238	50.43	50.143	50.765	0.44761					44	14	4	0	0	0	0.42393	1	4892	4892		62.107	12.666	1	1447800			13990	2768	9614	9623	16119	16119					-0.009120874614836794
HEVKRLMF	8	Unmodified	_HEVKRLMF_					0	0	0		ENST00000504656.1_1_5:289217-290334:-|nuORF	ENST00000504656.1_1_5:289217-290334:-|nuORF	ENST00000504656.1_1_5:289217-290334:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2924194335938	2	530.292037	1058.56952	1.2413	0.00065826	1.2607	0.00066853	2.502	0.0013268	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.86791	1	9561	9561		28.254	1.5614	1	1864800			13991	12907	9615	9624	16120	16120					0.04257813044955583
HEWLINSVPL	10	Unmodified	_HEWLINSVPL_					0	0	0			REV__nc|ENSG00000004766|Q96JG6-3|VPS50	REV__nc|ENSG00000004766|Q96JG6-3|VPS50	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3665161132812	2	604.327131	1206.63971	0.90466	0.00054671	-2.2467	-0.0013578	-1.3421	-0.00081105	604.8263851616606	104.36	0.40333	104.48	104.15	104.56	0.11684					14	9	3	0	0	0	0.37624	1	11039	11039		37.812	6.2817	1	420880	+		13992	16061	9616	9625	16121	16121					0.04465389914435036
HFAVLAKIN	9	Unmodified	_HFAVLAKIN_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8009948730469	2	506.800552	1011.58655	-1.5095	-0.000765	2.422	0.0012274	0.91248	0.00046244	506.8017338500082	46.598	2.104	46.598	45.336	47.44	0					97	57	2	0	0	0	0.77546	1	3389	3389		31.955	3.7006	1	294110	+		13993	15493	9617	9626	16122	16122					0.08122056922422871
HFAVLAKIN	9	Unmodified	_HFAVLAKIN_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8006286621094	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.7932	1	3151	3151		26.796	1.3459	1	412810	+		13994	15493	9617	9626	16123	16123					0.08122056922422871
HFDDFVTNL	9	Unmodified	_HFDDFVTNL_					0	0	0		nc|ENSG00000057252|P35610-3|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;ENSG00000057252|ENST00000367619|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2582397460938	2	554.258914	1106.50327	-0.78652	-0.00043593	0.72439	0.0004015	-0.062129	-3.4436E-05	554.259215206248	71.15	2.4532	71.535	70.999	73.453	0.38449					129	58	4	0	0	0	0.084975	4	7908	7886;7908;7932;7959		96.19	15.736	1	2148900			13995	1036	9618	9627	16124;16125;16126;16127	16125					-0.045717243161107035
HFDDFVTNL	9	Unmodified	_HFDDFVTNL_					0	0	0		nc|ENSG00000057252|P35610-3|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;ENSG00000057252|ENST00000367619|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.258544921875	2	554.258914	1106.50327	-0.20418	-0.00011317	0.29177	0.00016171	0.087583	4.8543E-05	554.2589451632552	71.042	2.142	71.59	71.166	73.308	0.54756					123	51	4	0	0	0	0.18601	1	7940	7940		76.774	9.2805	1	2743300			13996	1036	9618	9627	16128	16128					-0.045717243161107035
HFDLNLRQF	9	Unmodified	_HFDLNLRQF_					0	0	0		ENSG00000227057|ENST00000374617|WDR46	ENSG00000227057|ENST00000374617|WDR46	ENSG00000227057|ENST00000374617|WDR46	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	595.3076782226562	2	595.309272	1188.60399	-0.71089	-0.0004232	0.78427	0.00046689	0.073387	4.3688E-05	595.3096481578248	62.135	1.7915	62.523	61.957	63.748	0.38845					88	40	4	0	0	0	0.07589	4	6657	6635;6645;6657;6670		98.629	31.136	1	706330			13997	8717	9619	9628	16129;16130;16131;16132	16131					0.017233524574066905
HFDLNLRQF	9	Unmodified	_HFDLNLRQF_					0	0	0		ENSG00000227057|ENST00000374617|WDR46	ENSG00000227057|ENST00000374617|WDR46	ENSG00000227057|ENST00000374617|WDR46	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	595.307861328125	2	595.309272	1188.60399	-0.18529	-0.00011031	0.17931	0.00010674	-0.0059867	-3.5639E-06	595.3093976132366	62.024	1.6687	62.579	62.171	63.84	0.55449					83	38	4	0	0	0	0.07589	4	6641	6641;6653;6664;6678		98.629	47.102	1	666850			13998	8717	9619	9628	16133;16134;16135;16136	16133					0.017233524574066905
HFEEGVPNP	9	Unmodified	_HFEEGVPNP_					0	0	0			REV__ENSG00000156574|ENST00000287139|NODAL	REV__ENSG00000156574|ENST00000287139|NODAL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.2352294921875	2	513.237981	1024.46141	-0.38199	-0.00019605	-0.23664	-0.00012145	-0.61864	-0.00031751	513.2377753489411	53.131	0.77744	53.107	52.783	53.56	-0.023849					28	19	2	0	0	0	0.58151	1	4735	4735		47.916	0.25827	1	76451	+		13999	20498	9620	9629	16137	16137					-0.049842800046235425
HFELIDGH	8	Unmodified	_HFELIDGH_					0	0	0			REV__ENSG00000196584|ENST00000359321|XRCC2	REV__ENSG00000196584|ENST00000359321|XRCC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.2358703613281	2	484.235242	966.45593	0.64492	0.00031229	0.99938	0.00048394	1.6443	0.00079623	484.2357261388031	84.984	0.56373	85.133	84.777	85.34	0.14857					41	12	4	0	0	0	0.88915	1	8313	8313		35.201	0	1	1640500	+		14000	23149	9621	9630	16138	16138					-0.028639587964335078
HFFIGNRK	8	Unmodified	_HFFIGNRK_					0	0	0		ENSG00000148841|ENST00000337478|ITPRIP	ENSG00000148841|ENST00000337478|ITPRIP	ENSG00000148841|ENST00000337478|ITPRIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7843017578125	2	509.782693	1017.55083	2.0655	0.0010529	3.3307	0.001698	5.3962	0.0027509	509.7839834358301	106.91	0.92004	107.01	106.61	107.53	0.10396					57	33	3	0	0	0	0.91005	1	13018	13018		42.474	3.6683	1	400230			14001	4986	9622	9631	16139	16139					0.042760194654192674
HFGPCALIKL	10	Unmodified	_HFGPCALIKL_					0	0	0		ENST00000494253.1_1_10:71144437-71146246:+|nuORF	ENST00000494253.1_1_10:71144437-71146246:+|nuORF	ENST00000494253.1_1_10:71144437-71146246:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.3098754882812	2	549.810062	1097.60557	0.31767	0.00017466	-0.36389	-0.00020007	-0.046212	-2.5408E-05	549.8099077236782	16.373	0.19002	16.293	16.191	16.381	-0.080017					9	6	2	0	0	0	0.86452	1	107	107		30.504	1.3541	1	61794			14002	12746	9623	9632	16140	16140					0.06067270221819854
HFGPCALIKL	10	Unmodified	_HFGPCALIKL_					0	0	0		ENST00000494253.1_1_10:71144437-71146246:+|nuORF	ENST00000494253.1_1_10:71144437-71146246:+|nuORF	ENST00000494253.1_1_10:71144437-71146246:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	549.810062	1097.60557	1.0512	0.00057796	-1.3845	-0.00076123	-0.33333	-0.00018327	549.8091112675204	16.291	0.19256	16.208	16.135	16.328	-0.083363	-0.071754	-0.00091366	NaN	30.504	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56524			14003	12746	9623	9632							0.06067270221819854
HFGPCALIKL	10	Unmodified	_HFGPCALIKL_					0	0	0		ENST00000494253.1_1_10:71144437-71146246:+|nuORF	ENST00000494253.1_1_10:71144437-71146246:+|nuORF	ENST00000494253.1_1_10:71144437-71146246:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	549.810062	1097.60557	0.090755	4.9898E-05	0.11592	6.3733E-05	0.20667	0.00011363	549.8099783481399	16.215	0.18864	16.263	16.141	16.33	0.047804	-0.016477	0.00073626	NaN	30.504	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71458			14004	12746	9623	9632							0.06067270221819854
HFGPCALIKL	10	Unmodified	_HFGPCALIKL_					0	0	0		ENST00000494253.1_1_10:71144437-71146246:+|nuORF	ENST00000494253.1_1_10:71144437-71146246:+|nuORF	ENST00000494253.1_1_10:71144437-71146246:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	549.810062	1097.60557	0.12988	7.1409E-05	-0.23267	-0.00012792	-0.10279	-5.6515E-05	549.8096208296284	16.282	0.14802	16.341	16.232	16.38	0.059267	0.061684	0.00035295	NaN	30.504	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83314			14005	12746	9623	9632							0.06067270221819854
HFGPCALIKL	10	Unmodified	_HFGPCALIKL_					0	0	0		ENST00000494253.1_1_10:71144437-71146246:+|nuORF	ENST00000494253.1_1_10:71144437-71146246:+|nuORF	ENST00000494253.1_1_10:71144437-71146246:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	549.810062	1097.60557	0.93313	0.00051304	-1.3004	-0.00071496	-0.36726	-0.00020192	549.8090581194474	16.316	0.19217	16.292	16.183	16.376	-0.024035	0.012669	-0.00082113	NaN	30.504	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96217			14006	12746	9623	9632							0.06067270221819854
HFILNGVKHL	10	Unmodified	_HFILNGVKHL_					0	0	0			REV__ENST00000551059.1_1_12:109094839-109125250:-|nuORF	REV__ENST00000551059.1_1_12:109094839-109125250:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3427124023438	2	589.345658	1176.67676	-0.65438	-0.00038565	-4.023	-0.0023709	-4.6774	-0.0027566	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.84112	1	10164	10164		37.159	0.71236	1	16804000	+		14007	28605	9624	9633	16141	16141					0.09549106250869954
HFINKAKR	8	Unmodified	_HFINKAKR_					0	0	0		nc|ENSG00000084112|Q8WYL5-2|SSH1;nc|ENSG00000084112|Q8WYL5-5|SSH1;ENSG00000084112|ENST00000326495|SSH1;nc|ENSG00000084112|Q8WYL5-4|SSH1	nc|ENSG00000084112|Q8WYL5-2|SSH1	nc|ENSG00000084112|Q8WYL5-2|SSH1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7994079589844	2	507.303793	1012.59303	-1.4388	-0.00072989	-0.59779	-0.00030326	-2.0365	-0.0010331	507.30336170090277	50.973	1.0849	50.973	50.576	51.661	0					33	28	2	0	0	0	0.4196	1	4121	4121		35.201	2.3883	1	51393			14008	1514	9625	9634	16142	16142					0.08723994873798802
HFINPETVPK	10	Unmodified	_HFINPETVPK_					0	0	0		ENST00000476877.1_1_20:55746017-55748543:-|nuORF;ENSG00000101144|ENST00000395863|BMP7	ENST00000476877.1_1_20:55746017-55748543:-|nuORF	ENST00000476877.1_1_20:55746017-55748543:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	591.3191528320312	2	591.319306	1180.62406	-0.64143	-0.00037929	1.1914	0.00070451	0.54999	0.00032522	591.3201240825498	66.908	0.89341	66.924	66.652	67.546	0.016205					64	40	2	0	0	0	0.80179	1	6271	6271		39.253	5.0803	1	235670			14009	1900	9626	9635	16143	16143					0.04097103397361934
HFIPIRMAL	9	Unmodified	_HFIPIRMAL_					0	0	0		L1MB3_dup13915|chr15:92712904-92713305:+|1.1921108309488213|0.0952392372427663|3.65|63.0|2|1|sense	L1MB3_dup13915|chr15:92712904-92713305:+|1.1921108309488213|0.0952392372427663|3.65|63.0|2|1|sense	L1MB3_dup13915|chr15:92712904-92713305:+|1.1921108309488213|0.0952392372427663|3.65|63.0|2|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.3187866210938	2	549.318054	1096.62156	3.3171	0.0018221	-3.9996	-0.002197	-0.68248	-0.0003749	549.3157779565678	101.02	2.3329	100.97	100.53	102.87	-0.052109					129	55	4	0	0	0	0.7932	1	10950	10950		26.796	2.5934	1	1991000			14010	14574	9627	9636	16144	16144					0.07710976458724872
HFIRPISL	8	Unmodified	_HFIRPISL_					0	0	0			REV__nc|ENSG00000160563|Q6P2C8-4|MED27	REV__nc|ENSG00000160563|Q6P2C8-4|MED27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7963562011719	2	491.795269	981.575986	0.16895	8.3091E-05	0.70742	0.00034791	0.87638	0.000431	491.795491652363	46.653	1.8507	46.639	45.976	47.827	-0.013821					152	52	4	0	0	0	0.7961	1	3666	3666		17.365	0	1	2674700	+		14011	29970	9628	9637	16145	16145					0.08446074267999393
HFIRPISL	8	Unmodified	_HFIRPISL_					0	0	0			REV__nc|ENSG00000160563|Q6P2C8-4|MED27	REV__nc|ENSG00000160563|Q6P2C8-4|MED27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7955322265625	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.86288	2	4674	4674;4833		33.516	5.2613	1	792830	+		14012	29970	9628	9637	16146;16147	16146					0.08446074267999393
HFIRPISL	8	Unmodified	_HFIRPISL_					0	0	0			REV__nc|ENSG00000160563|Q6P2C8-4|MED27	REV__nc|ENSG00000160563|Q6P2C8-4|MED27	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79583740234375	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.79929	1	3773	3773		18.324	0	1	1346800	+		14013	29970	9628	9637	16148	16148					0.08446074267999393
HFISPKERH	9	Unmodified	_HFISPKERH_					0	0	0			REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.80859375	2	575.809439	1149.60433	-1.2947	-0.00074548	-0.12746	-7.3391E-05	-1.4221	-0.00081887	575.8093189259149	37.365	0.70636	37.376	37.062	37.768	0.011173					37	15	3	0	0	0	0.76764	1	2475	2475		34.173	3.8548	1	250180	+		14014	18180	9629	9638	16149	16149					0.03550772177277395
HFKIQNLI	8	Unmodified	_HFKIQNLI_					0	0	0			REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|85|3|sense	REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|85|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.80023193359375	2	506.800552	1011.58655	0.18992	9.6251E-05	0.88652	0.00044929	1.0764	0.00054554	506.80099089303076	46.969	1.4152	46.955	46.233	47.648	-0.013817					58	38	2	0	0	0	0.88915	1	3740	3740		35.201	1.7077	1	254450	+		14015	29495	9630	9639	16150	16150					0.08122056922411502
HFLEAWHRLG	10	Unmodified	_HFLEAWHRLG_					0	0	0		ENST00000217173.6_1_20:3090836-3102040:-|nuORF	ENST00000217173.6_1_20:3090836-3102040:-|nuORF	ENST00000217173.6_1_20:3090836-3102040:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3269653320312	2	633.330539	1264.64652	-0.5241	-0.00033193	-0.9785	-0.00061971	-1.5026	-0.00095164	633.331031584719	59.587	0.2963	59.62	59.469	59.766	0.032825					9	6	2	0	0	0	0.37624	1	5514	5514		45.952	26.848	1	58555			14016	9148	9631	9640	16151	16151					0.024787475856328456
HFLELLRV	8	Unmodified	_HFLELLRV_					0	0	0		ENST00000381813.4_1_2:10197463-10197871:-|nuORF	ENST00000381813.4_1_2:10197463-10197871:-|nuORF	ENST00000381813.4_1_2:10197463-10197871:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8088989257812	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.85277	1	4261	4261		25.45	0	1	926440			14017	10962	9632	9641	16152	16152					0.09042343439477918
HFLLQLTELT	10	Unmodified	_HFLLQLTELT_					0	0	0		nc|ENSG00000221887|P0C7T4|HMSD	nc|ENSG00000221887|P0C7T4|HMSD	nc|ENSG00000221887|P0C7T4|HMSD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5646057128906	3	405.564168	1213.67067	-0.18878	-7.6562E-05	1.7449	0.00070767	1.5561	0.00063111	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.86201	1	5882	5882		22.58	6.659	1	257140			14018	15259	9633	9642	16153	16153					0.07238543228640992
HFLLVWLV	8	Unmodified	_HFLLVWLV_					0	0	0		nc|ENSG00000143921|Q9H221-2|ABCG8;ENSG00000143921|ENST00000272286|ABCG8	nc|ENSG00000143921|Q9H221-2|ABCG8	nc|ENSG00000143921|Q9H221-2|ABCG8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8108520507812	2	513.810388	1025.60622	0.42443	0.00021808	-3.023	-0.0015532	-2.5985	-0.0013352	513.8087851474304	57.112	1.0963	57.218	56.855	57.952	0.1055					82	52	2	0	0	0	0.88393	1	4846	4846		33.493	8.0428	1	170930			14019	4675	9634	9643	16154	16154					0.0944443293317363
HFLPSLLR	8	Unmodified	_HFLPSLLR_					0	0	0		ENST00000561298.1_1_11:125201665-125201761:+|nuORF	ENST00000561298.1_1_11:125201665-125201761:+|nuORF	ENST00000561298.1_1_11:125201665-125201761:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7956237792969	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.86288	1	3590	3590		26.796	0	1	2891800			14020	13832	9635	9644	16155	16155					0.08446074268010761
HFLPSLLR	8	Unmodified	_HFLPSLLR_					0	0	0		ENST00000561298.1_1_11:125201665-125201761:+|nuORF	ENST00000561298.1_1_11:125201665-125201761:+|nuORF	ENST00000561298.1_1_11:125201665-125201761:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7951965332031	2	491.795269	981.575986	0.09879	4.8585E-05	0.95013	0.00046727	1.0489	0.00051585	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.87479	1	3934	3934		30.504	0	1	1349600			14021	13832	9635	9644	16156	16156					0.08446074268010761
HFLPSLLR	8	Unmodified	_HFLPSLLR_					0	0	0		ENST00000561298.1_1_11:125201665-125201761:+|nuORF	ENST00000561298.1_1_11:125201665-125201761:+|nuORF	ENST00000561298.1_1_11:125201665-125201761:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958068847656	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.80706	1	3478	3478		19.36	0	1	2747400			14022	13832	9635	9644	16157	16157					0.08446074268010761
HFLPVELY	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))HFLPVELY_					1	0	0			REV__ENST00000607208.1_1_6:13321141-13321207:-|nuORF	REV__ENST00000607208.1_1_6:13321141-13321207:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2796020507812	2	530.279118	1058.54368	-0.036044	-1.9114E-05	0.35191	0.00018661	0.31586	0.0001675	530.2801983138189	59.193	1.3973	59.179	58.111	59.508	-0.013729					80	45	3	0	0	0	0.89567	1	5448	5448		57.453	11.501	1	262600	+		14023	29369	9636	9645	16158	16158					0.01675242074338712
HFLQLKNL	8	Unmodified	_HFLQLKNL_					0	0	0			REV__ENST00000476536.5_1_20:13769250-13773871:+|nuORF	REV__ENST00000476536.5_1_20:13769250-13773871:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8011169433594	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.348	1	48.386	47.886	48.886	0.037731								0	0	0	0.30316	1	3678	3678		42.474	6.8562	1		+		14024	27338	9637	9646	16159	16159					0.08122056922411502
HFLQLLKP	8	Unmodified	_HFLQLLKP_					0	0	0			REV__nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	REV__nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.30609130859375	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.847	1	52.843	52.343	53.343	-0.0033035								0	0	0	0.29498	1	4591	4591		26.796	1.3459	1		+		14025	23736	9638	9647	16160	16160					0.09887244927790562
HFLQLLKP	8	Unmodified	_HFLQLLKP_					0	0	0			REV__nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	REV__nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.30535888671875	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.947	1	52.923	52.423	53.423	-0.023849								0	0	0	0.30784	1	4706	4706		14.664	0	1		+		14026	23736	9638	9647	16161	16161					0.09887244927790562
HFLSRILP	8	Unmodified	_HFLSRILP_					0	0	0			REV__nc|ENSG00000057252|P35610-3|SOAT1	REV__nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79571533203125	2	491.795269	981.575986	0.09879	4.8585E-05	0.95013	0.00046727	1.0489	0.00051585	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.89494	1	4137	4137		37.159	6.6555	1	1349600	+		14027	16425	9639	9648	16162	16162					0.08446074267999393
HFLSRILP	8	Unmodified	_HFLSRILP_					0	0	0			REV__nc|ENSG00000057252|P35610-3|SOAT1	REV__nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79583740234375	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.86288	1	4829	4829		26.796	1.3459	1	703950	+		14028	16425	9639	9648	16163	16163					0.08446074267999393
HFLSRILP	8	Unmodified	_HFLSRILP_					0	0	0			REV__nc|ENSG00000057252|P35610-3|SOAT1	REV__nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79583740234375	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.82464	1	3509	3509		21.702	0	1	2747400	+		14029	16425	9639	9648	16164	16164					0.08446074267999393
HFLSRILP	8	Unmodified	_HFLSRILP_					0	0	0			REV__nc|ENSG00000057252|P35610-3|SOAT1	REV__nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79571533203125	2	491.795269	981.575986	-0.17405	-8.5598E-05	1.0809	0.00053159	0.90686	0.00044599	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.82464	1	3497	3497		21.702	0	1	2994900	+		14030	16425	9639	9648	16165	16165					0.08446074267999393
HFLTIPRL	8	Unmodified	_HFLTIPRL_					0	0	0		ENST00000560801.5_2_15:31320559-31354823:-|nuORF;nc|ENSG00000134160|Q7Z4N2-2|TRPM1;nc|ENSG00000134160|Q7Z4N2-3|TRPM1;nc|ENSG00000134160|Q7Z4N2|TRPM1;ENSG00000134160|ENST00000256552|TRPM1;nc|ENSG00000134160|Q7Z4N2-5|TRPM1	ENST00000560801.5_2_15:31320559-31354823:-|nuORF	ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.803466796875	2	498.803094	995.591636	-1.4653	-0.00073091	2.6111	0.0013024	1.1457	0.00057149	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.88915	1	4283	4283		35.201	1.6851	1	2964600			14031	3913	9640	9649	16166	16166					0.09366360785031702
HFLTIPRL	8	Unmodified	_HFLTIPRL_					0	0	0		ENST00000560801.5_2_15:31320559-31354823:-|nuORF;nc|ENSG00000134160|Q7Z4N2-2|TRPM1;nc|ENSG00000134160|Q7Z4N2-3|TRPM1;nc|ENSG00000134160|Q7Z4N2|TRPM1;ENSG00000134160|ENST00000256552|TRPM1;nc|ENSG00000134160|Q7Z4N2-5|TRPM1	ENST00000560801.5_2_15:31320559-31354823:-|nuORF	ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.80340576171875	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.87922	1	4519	4519		31.955	3.7006	1	2702800			14032	3913	9640	9649	16167	16167					0.09366360785031702
HFLTIPRL	8	Unmodified	_HFLTIPRL_					0	0	0		ENST00000560801.5_2_15:31320559-31354823:-|nuORF;nc|ENSG00000134160|Q7Z4N2-2|TRPM1;nc|ENSG00000134160|Q7Z4N2-3|TRPM1;nc|ENSG00000134160|Q7Z4N2|TRPM1;ENSG00000134160|ENST00000256552|TRPM1;nc|ENSG00000134160|Q7Z4N2-5|TRPM1	ENST00000560801.5_2_15:31320559-31354823:-|nuORF	ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.80401611328125	2	498.803094	995.591636	0.57569	0.00028715	0.65338	0.00032591	1.2291	0.00061306	498.80326110747177	49.369	1.5492	50.214	49.828	51.377	0.84501					106	37	4	0	0	0	0.86288	1	4861	4861		26.796	5.0938	1	6182600			14033	3913	9640	9649	16168	16168					0.09366360785031702
HFLVGFNNHIL	11	Unmodified	_HFLVGFNNHIL_					0	0	0			REV__ENST00000476408.1_1_1:111422872-111441814:+|nuORF	REV__ENST00000476408.1_1_1:111422872-111441814:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.56915283203125	3	437.571657	1309.69314	0.35993	0.0001575	-4.3467	-0.001902	-3.9868	-0.0017445	437.56961237736607	34.275	0.5778	34.485	34.192	34.769	0.21003					28	13	3	0	0	0	0.69931	1	2525	2525		31.634	1.0654	1	258390	+		14034	27331	9641	9650	16169	16169					0.05068187416941328
HFLWILAI	8	Unmodified	_HFLWILAI_					0	0	0		ENST00000521844.1_1_8:8861643-8861781:+|nuORF	ENST00000521844.1_1_8:8861643-8861781:+|nuORF	ENST00000521844.1_1_8:8861643-8861781:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7991638183594	2	506.802563	1011.59057	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.752	1	43.752	43.252	44.252	0								0	0	0	0.2945	1	3125	3125		33.493	1.5381	1				14035	13178	9642	9651	16170	16170					0.08524146416129952
HFLWILAI	8	Unmodified	_HFLWILAI_					0	0	0		ENST00000521844.1_1_8:8861643-8861781:+|nuORF	ENST00000521844.1_1_8:8861643-8861781:+|nuORF	ENST00000521844.1_1_8:8861643-8861781:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.7997131347656	2	506.802563	1011.59057	-0.49009	-0.00024838	-1.6283	-0.00082521	-2.1184	-0.0010736	506.80171853826346	50.706	1.8822	50.736	49.561	51.443	0.029629					72	54	2	0	0	0	0.91333	1	4008	4008		43.626	8.474	1	171430			14036	13178	9642	9651	16171	16171					0.08524146416129952
HFMVEVKGDL	10	Unmodified	_HFMVEVKGDL_					0	0	0		ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-4|CASP9	ENSG00000132906|ENST00000333868|CASP9	ENSG00000132906|ENST00000333868|CASP9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.30859375	2	587.799891	1173.58523	-0.29635	-0.0001742	-1.2323	-0.00072436	-1.5287	-0.00089856	587.8014124952775	38.209	0.6449	38.732	38.434	39.079	0.52235					27	15	3	0	0	0	0.37624	1	3131	3131		44.377	6.869	1	312150			14037	3838	9643	9652	16172	16172					0.005380547713684791
HFNHEPPEET	10	Unmodified	_HFNHEPPEET_					0	0	0		nc|ENSG00000133943|Q7Z3D6-5|DGLUCY;nc|ENSG00000133943|Q7Z3D6-4|DGLUCY;nc|ENSG00000133943|Q7Z3D6-3|DGLUCY;nc|ENSG00000133943|Q7Z3D6|DGLUCY;ENSG00000133943|ENST00000256324|DGLUCY	nc|ENSG00000133943|Q7Z3D6-5|DGLUCY	nc|ENSG00000133943|Q7Z3D6-5|DGLUCY	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.7630615234375	2	618.767634	1235.52072	-1.1348	-0.00070217	-1.9891	-0.0012308	-3.1239	-0.001933	618.766319163339	31.703	0.40106	31.703	31.444	31.845	0					24	15	2	0	0	0	0.71042	1	1539	1539		44.117	9.9443	1	71330			14038	3900	9644	9653	16173	16173					-0.08762428781096787
HFPIEIDS	8	Unmodified	_HFPIEIDS_					0	0	0		nc|ENSG00000061794|P82673-2|MRPS35;ENSG00000061794|ENST00000081029|MRPS35	nc|ENSG00000061794|P82673-2|MRPS35	nc|ENSG00000061794|P82673-2|MRPS35	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2342224121094	2	479.23745	956.460347	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.676	1	16.676	16.176	17.176	0								0	0	0	0.30004	1	143	143		21.702	1.7056	1				14039	1077	9645	9654	16174	16174					-0.019624943735266243
HFPKKRKLR	9	Unmodified	_HFPKKRKLR_					0	0	0			REV__ENSG00000182791|ENST00000333861|CCDC87	REV__ENSG00000182791|ENST00000333861|CCDC87	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.3905029296875	2	605.388191	1208.76183	0.40196	0.00024334	2.1907	0.0013262	2.5926	0.0015695	605.3896161561632	44.898	1.0755	44.947	44.415	45.49	0.048996					49	25	3	0	0	0	0.7932	1	3186	3186		25.45	5.4534	1	269720	+		14040	22551	9646	9655	16175	16175					0.16579896507300873
HFPRLVTI	8	Unmodified	_HFPRLVTI_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7969055175781	2	491.795269	981.575986	-2.0878	-0.0010268	2.9764	0.0014638	0.88855	0.00043698	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.87479	1	4846	4846		30.504	0	1	1484300	+		14041	20445	9647	9656	16176	16176					0.08446074267999393
HFQLLLLFIKW	11	Unmodified	_HFQLLLLFIKW_					0	0	0			REV__ENST00000452075.7_1_10:43015418-43015709:-|nuORF	REV__ENST00000452075.7_1_10:43015418-43015709:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.6277770996094	3	486.627102	1456.85948	4.4394	0.0021603	-4.2417	-0.0020641	0.19762	9.617E-05	486.6250467267242	107.05	0.79998	107.2	106.9	107.7	0.14929					47	28	2	0	0	0	0.78391	1	13133	13133		14.694	1.7362	1	373740	+		14042	26892	9648	9657	16177	16177					0.14932240592793278
HFRIGVAILQR	11	Unmodified	_HFRIGVAILQR_					0	0	0		ENSG00000117597|ENST00000491415|UTP25	ENSG00000117597|ENST00000491415|UTP25	ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26788330078125	3	437.266568	1308.77787	-0.7643	-0.0003342	3.6976	0.0016168	2.9333	0.0012826	437.2680989446087	50.458	1.6052	50.435	49.633	51.238	-0.02343					188	43	5	0	0	0	0.67041	1	4362	4362		36.318	8.6737	1	2919200			14043	2988	9649	9658	16178	16178					0.13583557953529635
HFRIGVAILQR	11	Unmodified	_HFRIGVAILQR_					0	0	0		ENSG00000117597|ENST00000491415|UTP25	ENSG00000117597|ENST00000491415|UTP25	ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26776123046875	3	437.266568	1308.77787	-0.68964	-0.00030156	3.497	0.0015291	2.8073	0.0012275	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.76579	1	4895	4895		18.531	0.69791	1	2651700			14044	2988	9649	9658	16179	16179					0.13583557953529635
HFRIGVAILQR	11	Unmodified	_HFRIGVAILQR_					0	0	0		ENSG00000117597|ENST00000491415|UTP25	ENSG00000117597|ENST00000491415|UTP25	ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2680358886719	3	437.266568	1308.77787	-0.49223	-0.00021524	3.5152	0.0015371	3.023	0.0013218	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.71803	1	4004	4004		28.577	2.685	1	3262400			14045	2988	9649	9658	16180	16180					0.13583557953529635
HFRIGVAILQR	11	Unmodified	_HFRIGVAILQR_					0	0	0		ENSG00000117597|ENST00000491415|UTP25	ENSG00000117597|ENST00000491415|UTP25	ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2676696777344	3	437.266568	1308.77787	0.02954	1.2917E-05	2.8309	0.0012379	2.8604	0.0012508	437.26770833059527	48.1	1.3181	49.023	48.466	49.784	0.92315					115	32	4	0	0	0	0.74022	1	4657	4657		24.232	5.7008	1	3276900			14046	2988	9649	9658	16181	16181					0.13583557953529635
HFRLAWVF	8	Unmodified	_HFRLAWVF_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.299072265625	2	538.295436	1074.57632	1.4165	0.00076247	-2.5795	-0.0013885	-1.163	-0.00062604	538.2938571402276	102.11	0.78074	102.37	102.07	102.85	0.26323					52	18	4	0	0	0	0.9159	1	12373	12373		44.531	1.6668	1	2100300	+		14047	17216	9650	9659	16182	16182					0.04201493987829963
HFRQQRSRRNQ	11	Unmodified	_HFRQQRSRRNQ_					0	0	0		ENST00000452508.6_1_11:108188209-108190710:+|nuORF	ENST00000452508.6_1_11:108188209-108190710:+|nuORF	ENST00000452508.6_1_11:108188209-108190710:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	504.93682861328125	3	504.938284	1511.79302	-0.50503	-0.00025501	0.0053726	2.7128E-06	-0.49966	-0.0002523	504.93822048751315	56.717	0.75676	56.789	56.58	57.336	0.071835					73	35	3	0	0	0	0.77511	1	4781	4781		16.53	4.097	1	653270			14048	11920	9651	9660	16183	16183					0.05759817803459555
HFRRQRFKMEK	11	Unmodified	_HFRRQRFKMEK_					0	0	0		chr2:61883548-61888381|18|21.28|0.43|5.64|-|1|CCT4,CCT4|1	chr2:61883548-61888381|18|21.28|0.43|5.64|-|1|CCT4,CCT4|1	chr2:61883548-61888381|18|21.28|0.43|5.64|-|1|CCT4,CCT4|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.8056640625	3	521.621016	1561.84122	-0.1259	-6.567E-05	0.67774	0.00035352	0.55184	0.00028785	522.2918383089324	44.829	0.60936	45.292	44.985	45.595	0.46313					30	14	3	0	0	0	0.18258	1	4115	4115		8.7993	0	1	524920			14049	341	9652	9661	16184	16184					0.08277175399098269
HFRRVRPGLRA	11	Unmodified	_HFRRVRPGLRA_					0	0	0		ENST00000236017.5_1_1:150240177-150241220:-|nuORF;ENST00000414276.6_1_1:150239820-150241394:-|nuORF;ENST00000461320.5_1_1:150239547-150241394:-|nuORF	ENST00000236017.5_1_1:150240177-150241220:-|nuORF	ENST00000236017.5_1_1:150240177-150241220:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6087646484375	3	455.609328	1363.80615	-0.22489	-0.00010246	-1.7256	-0.00078618	-1.9505	-0.00088864	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.74405	1	7491	7491		23.378	0.81632	1	1863900			14050	9234	9653	9662	16185	16185					0.13880300653499944
HFSTLPKPKPQ	11	Unmodified	_HFSTLPKPKPQ_					0	0	0		nc|ENSG00000164542|Q8NCT3-4|MATCAP2;ENST00000493327.1_1_7:36396426-36406798:-|nuORF;nc|ENSG00000164542|Q8NCT3-3|MATCAP2;nc|ENSG00000164542|Q8NCT3-2|MATCAP2;ENSG00000164542|ENST00000440378|MATCAP2;nc|ENSG00000164542|Q8NCT3|MATCAP2;nc|ENSG00000164542|Q8NCT3-5|MATCAP2	nc|ENSG00000164542|Q8NCT3-4|MATCAP2	nc|ENSG00000164542|Q8NCT3-4|MATCAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3598022460938	2	640.361505	1278.70846	-0.067952	-4.3514E-05	-4.0514	-0.0025944	-4.1194	-0.0026379	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.68532	1	10554	10554		33.922	2.3918	1	640120			14051	5975	9654	9663	16186	16186					0.08025054214135707
HFSWRKKPRR	10	Unmodified	_HFSWRKKPRR_					0	0	0		ENST00000399848.7_2_18:13645652-13645757:+|nuORF	ENST00000399848.7_2_18:13645652-13645757:+|nuORF	ENST00000399848.7_2_18:13645652-13645757:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.9424133300781	3	466.605695	1396.79525	2.578	0.0012029	2.4417	0.0011393	5.0197	0.0023422	466.60668985200886	100.48	2.1594	100.43	99.202	101.36	-0.052116					162	50	4	0	0	0	0.85441	1	10813	10813		20.837	1.5745	1	531470			14052	11214	9655	9664	16187	16187					0.11272898279185029
HFTIKSAKFV	10	Unmodified	_HFTIKSAKFV_					0	0	0			REV__ENSG00000106278|ENST00000393386|PTPRZ1	REV__ENSG00000106278|ENST00000393386|PTPRZ1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.342529296875	2	589.340041	1176.66553	0.80964	0.00047716	3.789	0.002233	4.5986	0.0027102	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.85934	1	9156	9156		35.618	0.41757	1	6634500	+		14053	17604	9656	9665	16188	16188					0.0842628415668969
HFTLLGRQAR	10	Unmodified	_HFTLLGRQAR_					0	0	0			REV__ENST00000465679.5_1_10:88718421-88722579:+|nuORF	REV__ENST00000465679.5_1_10:88718421-88722579:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2289733886719	3	400.231634	1197.67307	-1.8913	-0.00075696	-1.5339	-0.00061393	-3.4252	-0.0013709	400.2310265990648	42.098	0.5195	42.796	42.532	43.052	0.69754					30	12	3	0	0	0	0.86446	1	3737	3737		30.569	1.0181	1	1049000	+		14054	27114	9657	9666	16189	16189					0.0821443647698743
HFVEHLKVIN	10	Unmodified	_HFVEHLKVIN_					0	0	0			REV__ENSG00000100784|ENST00000614987|RPS6KA5	REV__ENSG00000100784|ENST00000614987|RPS6KA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3469848632812	2	618.348397	1234.68224	-0.1645	-0.00010172	-3.7425	-0.0023141	-3.907	-0.0024159	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.86218	1	9841	9841		32.812	1.2826	1	511870	+		14055	17219	9658	9667	16190	16190					0.0742878504267992
HFVLSAAR	8	Unmodified	_HFVLSAAR_					0	0	0		ENST00000563741.5_1_16:1828298-1832574:-|nuORF;ENST00000564709.5_1_16:1828298-1831862:-|nuORF;ENST00000565550.1_1_16:1828298-1832508:-|nuORF;ENSG00000162032|ENST00000566339|SPSB3	ENST00000563741.5_1_16:1828298-1832574:-|nuORF	ENST00000563741.5_1_16:1828298-1832574:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.75439453125	2	450.756144	899.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.482	1	79.482	78.982	79.982	0								0	0	0	0.29871	1	7312	7312		23.042	1.0826	1				14056	5663	9659	9668	16191	16191					0.0439664168274021
HFVRVLGR	8	Unmodified	_HFVRVLGR_					0	0	0		ENSG00000166938|ENST00000319212|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L	ENSG00000166938|ENST00000319212|DIS3L	ENSG00000166938|ENST00000319212|DIS3L	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.2983703613281	2	492.29851	982.582468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.716	1	59.716	59.216	60.216	0								0	0	0	0.30252	1	5206	5206		19.36	1.0356	1				14057	6250	9660	9669	16192	16192					0.09048012219375323
HGAAVYGLAL	10	Unmodified	_HGAAVYGLAL_					0	0	0			REV__nc|ENSG00000164488|Q5SW24-3|DACT2	REV__nc|ENSG00000164488|Q5SW24-3|DACT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.2669372558594	2	486.269084	970.523616	-1.6066	-0.00078124	-2.3049	-0.0011208	-3.9115	-0.0019021	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.85976	1	8598	8598		35.201	2.3883	1	1531500	+		14058	21086	9661	9670	16193	16193					0.03717491134352713
HGADRISK	8	Unmodified	_HGADRISK_					0	0	0			REV__ENST00000429404.1_1_10:60897597-60897936:-|nuORF	REV__ENST00000429404.1_1_10:60897597-60897936:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2406311035156	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.88185	1	7968	7968		32.812	0.85756	1	1219900	+		14059	26591	9662	9671	16194	16194					0.021228632977113193
HGARAKAAI	9	Unmodified	_HGARAKAAI_					0	0	0		ENSG00000135929|ENST00000258415|CYP27A1;ENST00000494263.5_1_2:219646839-219678911:+|nuORF	ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.2585144042969	2	447.767043	893.519533	-0.14531	-6.5065E-05	-2.1964	-0.00098349	-2.3417	-0.0010486	447.76594394366873	90.895	0.63285	90.964	90.64	91.272	0.069328					23	15	2	0	0	0	0.20789	1	9289	9289		31.955	11.473	1	116350			14060	4071	9663	9672	16195	16195					0.06851446431312525
HGARAKAAI	9	Unmodified	_HGARAKAAI_					0	0	0		ENSG00000135929|ENST00000258415|CYP27A1;ENST00000494263.5_1_2:219646839-219678911:+|nuORF	ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	447.767043	893.519533	1.4476	0.00064817	-3.8797	-0.0017372	-2.4322	-0.001089	447.7650867999935	90.938	0.67552	90.871	90.52	91.196	-0.067093	-0.0053517	-0.00075391	NaN	31.955	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	152690			14061	4071	9663	9672							0.06851446431312525
HGARAKAAI	9	Unmodified	_HGARAKAAI_					0	0	0		ENSG00000135929|ENST00000258415|CYP27A1;ENST00000494263.5_1_2:219646839-219678911:+|nuORF	ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	447.767043	893.519533	1.4852	0.00066503	-3.8946	-0.0017439	-2.4093	-0.0010788	447.7650703902109	90.685	0.67068	90.731	90.432	91.103	0.046448	-0.14502	-0.00076721	NaN	31.955	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	196010			14062	4071	9663	9672							0.06851446431312525
HGARAKAAI	9	Unmodified	_HGARAKAAI_					0	0	0		ENSG00000135929|ENST00000258415|CYP27A1;ENST00000494263.5_1_2:219646839-219678911:+|nuORF	ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	447.767043	893.519533	-1.3016	-0.00058279	-1.0679	-0.00047817	-2.3695	-0.001061	447.7663418113939	90.632	0.58866	90.85	90.51	91.099	0.21736	-0.02646	0.0017642	NaN	31.955	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150830			14063	4071	9663	9672							0.06851446431312525
HGARAKAAI	9	Unmodified	_HGARAKAAI_					0	0	0		ENSG00000135929|ENST00000258415|CYP27A1;ENST00000494263.5_1_2:219646839-219678911:+|nuORF	ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	447.767043	893.519533	0.48254	0.00021607	-2.487	-0.0011136	-2.0045	-0.00089754	447.7653828036334	90.515	0.44055	90.966	90.74	91.18	0.45058	0.089192	0.00049328	NaN	31.955	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79320			14064	4071	9663	9672							0.06851446431312525
HGARRRRRRVI	11	Unmodified	_HGARRRRRRVI_					0	0	0			REV__ENST00000305877.12_2_22:23522425-23523292:+|nuORF	REV__ENST00000305877.12_2_22:23522425-23523292:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.3022155761719	3	478.303009	1431.8872	-0.10097	-4.8294E-05	-0.13841	-6.62E-05	-0.23938	-0.00011449	478.302730378592	67.138	1.0775	67.155	66.828	67.905	0.016205					111	46	4	0	0	0	0.80813	2	6299	6297;6299		9.6461	2.9865	1	279890	+		14065	24822	9664	9673	16196;16197	16197					0.1885300141625521
HGATRRPH	8	Unmodified	_HGATRRPH_					0	0	0			REV__ENST00000264025.7_1_11:119599464-119599728:-|nuORF	REV__ENST00000264025.7_1_11:119599464-119599728:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.25506591796875	2	466.252092	930.48963	-0.11965	-5.5788E-05	3.5265	0.0016442	3.4069	0.0015885	466.2536537931843	61.171	1.1863	61.159	60.038	61.224	-0.012203					48	38	2	0	0	0	0.85277	1	5583	5583		25.45	1.2474	1	281870	+		14066	24461	9665	9674	16198	16198					0.021605074859849083
HGCFLHLLARL	11	Unmodified	_HGCFLHLLARL_					0	0	0			REV__ENST00000320442.8_1_12:58014065-58016599:+|nuORF	REV__ENST00000320442.8_1_12:58014065-58016599:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3590698242188	2	640.358242	1278.70193	1.5852	0.0010151	-0.73036	-0.0004677	0.85487	0.00054742	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.68378	1	10328	10328		34.173	0.25091	1	616450	+		14067	24998	9666	9675	16199	16199					0.07372837781781527
HGCWCAPSHL	10	Carbamidomethyl (C)	_HGC(Carbamidomethyl (C))WCAPSHL_	HGC(0.893)WC(0.107)APSHL		HGC(9.2)WC(-9.2)APSHL		0	1	0		ENST00000596902.1_1_19:44005755-44005845:-|nuORF	ENST00000596902.1_1_19:44005755-44005845:-|nuORF	ENST00000596902.1_1_19:44005755-44005845:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.24462890625	2	584.24476	1166.47497	-1.7222	-0.0010062	0.42944	0.0002509	-1.2927	-0.00075528	584.2448524221044	60.063	1.1625	60.453	60.095	61.257	0.39077					80	31	3	0	0	0	0.53935	1	6359	6359		53.351	7.3792	2	4634700			14068	14342	9667	9676	16200	16200	190				-0.10161068768707082
HGDLTFQH	8	Unmodified	_HGDLTFQH_					0	0	0		ENST00000588207.1_1_18:57637691-57638603:+|nuORF;ENST00000606261.1_1_7:26224125-26225400:+|nuORF;ENSG00000050344|ENST00000056233|NFE2L3	ENST00000588207.1_1_18:57637691-57638603:+|nuORF	ENST00000588207.1_1_18:57637691-57638603:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7249450683594	2	477.725041	953.435529	1.6127	0.00077041	3.8113	0.0018208	5.424	0.0025912	477.7267468236202	101.42	0.86987	101.75	101.55	102.41	0.32511					50	22	3	0	0	0	0.91005	1	12327	12327		42.474	0.078325	1	4403400			14069	993	9668	9677	16201	16201					-0.043051294562360454
HGEFESGPVAM	11	Unmodified	_HGEFESGPVAM_					0	0	0			REV__nc|ENSG00000106948|Q7Z591-5|AKNA	REV__nc|ENSG00000106948|Q7Z591-5|AKNA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8662719726562	2	580.755681	1159.49681	-1.1142	-0.00064709	-1.0706	-0.00062178	-2.1849	-0.0012689	580.7549163449564	78.736	1.0617	79.147	78.717	79.779	0.41059					30	24	2	0	0	0	0.17529	1	8972	8972		14.137	0	1	93272	+		14070	17637	9669	9678	16202	16202					-0.07655985539122412
HGGQSHPLL	9	Unmodified	_HGGQSHPLL_					0	0	0			REV__ENSG00000196950|ENST00000359634|SLC39A10	REV__ENSG00000196950|ENST00000359634|SLC39A10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.2498474121094	2	473.248683	944.482814	0.34188	0.00016179	-1.5991	-0.0007568	-1.2573	-0.000595	473.24782054202086	28.883	1.4946	28.914	28.31	29.804	0.030945					99	51	4	0	0	0	0.78058	1	1380	1380		30.504	1.3541	1	514570	+		14071	23184	9670	9679	16203	16203					0.008351498147703751
HGGSAQGSH	9	Unmodified	_HGGSAQGSH_					0	0	0			REV__ENSG00000114374|ENST00000338981|USP9Y;REV__nc|ENSG00000124486|Q93008-3|USP9X	REV__ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1844787597656	2	419.18354	836.352528	0.63595	0.00026658	-0.682	-0.00028588	-0.046049	-1.9303E-05	419.18328969471196	86.477	1.2293	86.92	86.409	87.638	0.44331					73	29	4	0	0	0	0.78983	1	10163	10163		27.882	1.1893	1	2405500	+		14072	18042;18587	9671	9680	16204	16204					-0.07219446184228673
HGGSAQGSH	9	Unmodified	_HGGSAQGSH_					0	0	0			REV__ENSG00000114374|ENST00000338981|USP9Y;REV__nc|ENSG00000124486|Q93008-3|USP9X	REV__ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1842346191406	2	419.18354	836.352528	2.1215	0.00088931	-2.058	-0.00086267	0.063545	2.6637E-05	419.18264095568793	100	1.9591	100.35	99.506	101.46	0.34591					92	48	2	0	0	0	0.67235	1	12168	12168		42.474	0	1	9424600	+		14073	18042;18587	9671	9680	16205	16205					-0.07219446184228673
HGGTASNGH	9	Unmodified	_HGGTASNGH_					0	0	0			REV__ENSG00000103194|ENST00000219473|USP10	REV__ENSG00000103194|ENST00000219473|USP10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1836853027344	2	419.18354	836.352528	0.63595	0.00026658	-0.682	-0.00028588	-0.046049	-1.9303E-05	419.18328969471196	86.477	1.2293	86.92	86.409	87.638	0.44331					73	29	4	0	0	0	0.78058	1	10112	10112		30.504	2.2494	1	2405500	+		14074	17394	9672	9681	16206	16206					-0.07219446184228673
HGGTCVDDEG	10	Unmodified	_HGGTCVDDEG_					0	0	0		nc|ENSG00000185559|P80370-2|DLK1;ENSG00000185559|ENST00000341267|DLK1	nc|ENSG00000185559|P80370-2|DLK1	nc|ENSG00000185559|P80370-2|DLK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.18402099609375	2	495.185088	988.355624	-1.6194	-0.00080188	-1.1193	-0.00055424	-2.7386	-0.0013561	495.184308315144	53.499	0.95576	53.521	53.182	54.138	0.022541					44	25	3	0	0	0	0.85466	1	4733	4733		20.947	0.4651	1	330000			14075	7723	9673	9682	16207	16207					-0.1390198391239892
HGHLLHPPLL	10	Unmodified	_HGHLLHPPLL_					0	0	0			REV__ENST00000300131.7_1_12:57488507-57488825:+|nuORF	REV__ENST00000300131.7_1_12:57488507-57488825:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.330322265625	2	567.33255	1132.65055	-1.3957	-0.00079181	-3.4705	-0.0019689	-4.8662	-0.0027608	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.85108	1	9167	9167		19.36	1.0356	1	17338000	+		14076	24745	9674	9683	16208	16208					0.08952837079368692
HGILLHGLE	9	Unmodified	_HGILLHGLE_					0	0	0		nc|ENSG00000132394|P57772-2|EEFSEC;ENSG00000132394|ENST00000254730|EEFSEC	nc|ENSG00000132394|P57772-2|EEFSEC	nc|ENSG00000132394|P57772-2|EEFSEC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7801818847656	2	494.782359	987.550165	-0.60063	-0.00029718	-3.4065	-0.0016855	-4.0071	-0.0019826	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.77546	1	8330	8330		31.955	6.5047	1	707910			14077	3792	9675	9684	16209	16209					0.0558918002569726
HGIRVAPPSA	10	Unmodified	_HGIRVAPPSA_					0	0	0		ENST00000497545.5_1_1:110029045-110031729:+|nuORF;ENST00000463678.5_1_1:110028686-110035219:+|nuORF;ENSG00000162650|ENST00000683729|ATXN7L2	ENST00000497545.5_1_1:110029045-110031729:+|nuORF	ENST00000497545.5_1_1:110029045-110031729:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8139343261719	2	502.785433	1003.55631	2.3264	0.0011697	4.1173	0.0020701	6.4437	0.0032398	502.78673832520997	97.442	0.8837	97.387	96.975	97.859	-0.055542					28	20	2	0	0	0	0.37624	1	10499	10499		40.778	0	1	110980			14078	5713	9676	9685	16210	16210					0.05467698257223219
HGITFLTR	8	Unmodified	_HGITFLTR_					0	0	0		ENSG00000205858|ENST00000401542|LRRC72	ENSG00000205858|ENST00000401542|LRRC72	ENSG00000205858|ENST00000401542|LRRC72	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.76727294921875	2	472.769252	943.52395	-0.10807	-5.1094E-05	-4.0843	-0.0019309	-4.1924	-0.001982	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.89494	1	8256	8256		37.159	1.9584	1	501240			14079	8545	9677	9686	16211	16211					0.04992910854218735
HGKAGLFLE	9	Unmodified	_HGKAGLFLE_					0	0	0		ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF	ENSG00000185164|ENST00000622306|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.26715087890625	2	486.269084	970.523616	-0.72647	-0.00035326	-3.2279	-0.0015696	-3.9543	-0.0019229	486.2674012957117	86.085	5.1254	86.27	85.016	90.141	0.18522					327	120	4	0	0	0	0.64922	1	8382	8382		44.117	8.4985	1	1830000			14080	2066	9678	9687	16212	16212					0.037174911343640815
HGKDAALLF	9	Unmodified	_HGKDAALLF_					0	0	0		ENSG00000023330|ENST00000484952|ALAS1	ENSG00000023330|ENST00000484952|ALAS1	ENSG00000023330|ENST00000484952|ALAS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.2669982910156	2	486.269084	970.523616	-1.0938	-0.00053186	-2.8649	-0.0013931	-3.9586	-0.0019249	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.74721	1	8936	8936		37.159	0.13063	1	1852700			14081	858	9679	9688	16213	16213					0.037174911343640815
HGKEILEKN	9	Unmodified	_HGKEILEKN_					0	0	0			REV__ENSG00000096696|ENST00000379802|DSP	REV__ENSG00000096696|ENST00000379802|DSP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	534.2937622070312	2	534.29583	1066.57711	0.72795	0.00038894	-2.9777	-0.001591	-2.2498	-0.001202	534.2941828355348	88.565	3.2008	88.715	87.555	90.756	0.15054					137	75	2	0	0	0	0.73802	1	8867	8867		37.812	2.6595	1	511660	+		14082	17077	9680	9689	16214	16214					0.04648243846236255
HGKFLLLGQ	9	Unmodified	_HGKFLLLGQ_					0	0	0		ENST00000582566.1_1_17:12019060-12019129:+|nuORF	ENST00000582566.1_1_17:12019060-12019129:+|nuORF	ENST00000582566.1_1_17:12019060-12019129:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.7997131347656	2	506.800552	1011.58655	-0.1225	-6.2083E-05	1.1991	0.00060769	1.0766	0.00054561	506.8011249172422	46.216	2.1586	46.137	45.418	47.576	-0.079006					85	63	2	0	0	0	0.7932	1	3339	3339		17.365	0	1	271040			14083	14115	9681	9690	16215	16215					0.08122056922422871
HGKIIYKSMV	10	Oxidation (M)	_HGKIIYKSM(Oxidation (M))V_		HGKIIYKSM(1)V		HGKIIYKSM(48)V	0	0	1		ENST00000368608.3_1_6:116598063-116598108:-|nuORF	ENST00000368608.3_1_6:116598063-116598108:-|nuORF	ENST00000368608.3_1_6:116598063-116598108:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3328857421875	2	596.331359	1190.64816	-0.57959	-0.00034563	3.17	0.0018904	2.5904	0.0015447	596.3331084008277	96.35	3.5496	96.416	95.306	98.855	0.06591					255	82	4	0	0	0	0.64457	1	10051	10051		47.657	9.8458	1	1242500			14084	10600	9682	9691	16216	16216		173			0.06046620559368421
HGKKTVASHLN	11	Unmodified	_HGKKTVASHLN_					0	0	0		ENST00000588105.1_1_19:16222711-16223300:+|nuORF	ENST00000588105.1_1_19:16222711-16223300:+|nuORF	ENST00000588105.1_1_19:16222711-16223300:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.3324584960938	2	596.333279	1190.652	0.92114	0.00054931	-1.5725	-0.00093773	-0.65136	-0.00038843	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.67778	1	9834	9834		35.152	1.2304	1	1402200			14085	14207	9683	9692	16217	16217					0.06430426377482945
HGKRKYLM	8	Unmodified	_HGKRKYLM_					0	0	0		ENST00000568717.1_1_16:74334023-74334994:+|nuORF	ENST00000568717.1_1_16:74334023-74334994:+|nuORF	ENST00000568717.1_1_16:74334023-74334994:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7931518554688	2	516.792204	1031.56985	1.5571	0.00080467	0.88181	0.00045571	2.4389	0.0012604	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.86791	1	9103	9103		28.254	0	1	834930			14086	13968	9684	9693	16218	16218					0.05533232764787499
HGKRSSVV	8	Unmodified	_HGKRSSVV_					0	0	0			REV__ENST00000550071.1_1_12:56661074-56663089:+|nuORF	REV__ENST00000550071.1_1_12:56661074-56663089:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2524108886719	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87922	1	7219	7219		31.955	1.4512	1	1788100	+		14087	19225	9685	9694	16219	16219					0.04839453677379879
HGKSARLT	8	Unmodified	_HGKSARLT_					0	0	0		ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1	ENSG00000009694|ENST00000371130|TENM1	ENSG00000009694|ENST00000371130|TENM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.251708984375	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.89043	1	7261	7261		35.618	5.1146	1	1788100			14088	755	9686	9695	16220	16220					0.048394536773685104
HGKSARLT	8	Unmodified	_HGKSARLT_					0	0	0		ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1	ENSG00000009694|ENST00000371130|TENM1	ENSG00000009694|ENST00000371130|TENM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2519226074219	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87064	3	7364	7364;7373;7886		37.159	8.9048	1	2494100			14089	755	9686	9695	16221;16222;16223	16221					0.048394536773685104
HGKSARLT	8	Unmodified	_HGKSARLT_					0	0	0		ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1	ENSG00000009694|ENST00000371130|TENM1	ENSG00000009694|ENST00000371130|TENM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2518615722656	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.87064	2	9385	9373;9385		42.396	6.7778	1	2235800			14090	755	9686	9695	16224;16225	16225					0.048394536773685104
HGKSKSGLGG	10	Unmodified	_HGKSKSGLGG_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.25390625	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.67571	1	8183	8183		45.972	5.3996	1	1324500	+		14091	18623	9687	9696	16226	16226					0.02719132469201213
HGKTALLHAL	10	Unmodified	_HGKTALLHAL_					0	0	0		ENSG00000148331|ENST00000277458|ASB6	ENSG00000148331|ENST00000277458|ASB6	ENSG00000148331|ENST00000277458|ASB6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8204956054688	2	530.816733	1059.61891	-0.81982	-0.00043517	3.8396	0.0020381	3.0198	0.0016029	531.3179945463662	84.982	1.0952	84.982	84.395	85.49	0					45	24	2	0	0	0	0.86218	1	8078	8078		32.812	0	1	216850			14092	4948	9688	9697	16227	16227					0.091488443254093
HGKVILRVKKI	11	Unmodified	_HGKVILRVKKI_					0	0	0		chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.96044921875	3	430.962597	1289.86596	-1.3804	-0.0005949	-3.5971	-0.0015502	-4.9775	-0.0021451	430.960928295924	39.883	1.7352	40.251	38.964	40.699	0.36797					162	41	5	0	0	0	0.80813	1	3369	3369		9.6461	0	1	5466100			14093	190	9689	9698	16228	16228					0.23262178544155176
HGKVILRVKKI	11	Unmodified	_HGKVILRVKKI_					0	0	0		chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.29608154296875	3	430.962597	1289.86596	0.0060132	2.5915E-06	-3.6893	-0.00159	-3.6833	-0.0015874	430.960790868088	38.105	0.87936	38.627	38.283	39.162	0.52236					94	21	5	0	0	0	0.8498	1	3142	3142		6.001	0	1	2039100			14094	190	9689	9698	16229	16229					0.23262178544155176
HGKVSYVPME	10	Oxidation (M)	_HGKVSYVPM(Oxidation (M))E_		HGKVSYVPM(1)E		HGKVSYVPM(77)E	0	0	1			REV__nc|ENSG00000243667|Q96MX6-2|DNAAF10	REV__nc|ENSG00000243667|Q96MX6-2|DNAAF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.7791137695312	2	581.781699	1161.54884	-0.53064	-0.00030872	-3.1407	-0.0018272	-3.6713	-0.0021359	581.7797517853181	44.667	0.96264	44.644	44.263	45.226	-0.023079					61	21	4	0	0	0	0.2575	1	3463	3463		77.318	11.514	1	638170	+		14095	23841	9690	9699	16230	16230		369			-0.025468221253731826
HGKVWKRRLRI	11	Unmodified	_HGKVWKRRLRI_					0	0	0		ENST00000547283.5_1_12:56680283-56694145:-|nuORF	ENST00000547283.5_1_12:56680283-56694145:-|nuORF	ENST00000547283.5_1_12:56680283-56694145:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.6436767578125	3	483.640628	1447.90005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.08	1	116.04	115.54	116.54	-0.037872								0	0	0	0.56276	1	13937	13937		6.3209	3.9319	1				14096	13603	9691	9700	16231	16231					0.1940201975578475
HGLALRSVPR	10	Unmodified	_HGLALRSVPR_					0	0	0		nc|ENSG00000145147|O94813-3|SLIT2;nc|ENSG00000145147|O94813-2|SLIT2;ENSG00000145147|ENST00000504154|SLIT2	nc|ENSG00000145147|O94813-3|SLIT2	nc|ENSG00000145147|O94813-3|SLIT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3325805664062	2	553.333082	1104.65161	1.2853	0.00071117	-2.555	-0.0014138	-1.2698	-0.00070261	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.86272	1	10243	10243		24.519	1.4767	1	4524400			14097	4749	9692	9701	16232	16232					0.10347051448275124
HGLCLRGW	8	Unmodified	_HGLCLRGW_					0	0	0			REV__ENST00000265052.9_1_3:127541489-127541672:-|nuORF	REV__ENST00000265052.9_1_3:127541489-127541672:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	471.2421875	2	471.242347	940.47014	-0.95009	-0.00044772	4.0005	0.0018852	3.0504	0.0014375	471.24408596775964	85.692	3.2441	85.877	84.627	87.871	0.18523					176	75	3	0	0	0	0.90024	1	8389	8389		39.021	3.4032	1	288030	+		14098	24485	9693	9702	16233	16233					-0.002475848491258148
HGLIRRHMKIH	11	Unmodified	_HGLIRRHMKIH_					0	0	0			REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1	REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.60809326171875	3	466.606818	1396.79863	2.578	0.0012029	0.033653	1.5703E-05	2.6116	0.0012186	466.60668985200886	100.48	2.1594	100.43	99.202	101.36	-0.052116					162	50	4	0	0	0	0.76251	1	10873	10873		19.263	1.4295	1	531470	+		14099	22783	9694	9703	16234	16234					0.11609825061577794
HGLLLKGYT	9	Unmodified	_HGLLLKGYT_					0	0	0		ENST00000415279.1_1_1:106434930-106435587:+|nuORF	ENST00000415279.1_1_1:106434930-106435587:+|nuORF	ENST00000415279.1_1_1:106434930-106435587:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.29046630859375	2	501.292559	1000.57057	-0.52377	-0.00026256	-3.845	-0.0019275	-4.3688	-0.00219	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.78536	1	8657	8657		29.15	1.2673	1	2929300			14100	11377	9695	9704	16235	16235					0.07030350685522535
HGLLVKRFH	9	Unmodified	_HGLLVKRFH_					0	0	0		nc|ENSG00000107331|Q9BZC7|ABCA2;ENSG00000107331|ENST00000341511|ABCA2;nc|ENSG00000107331|Q9BZC7-4|ABCA2;ENST00000487109.5_1_9:139906084-139911410:-|nuORF;ENST00000459850.5_1_9:139905575-139923366:-|nuORF;nc|ENSG00000107331|Q9BZC7-2|ABCA2	nc|ENSG00000107331|Q9BZC7|ABCA2	nc|ENSG00000107331|Q9BZC7|ABCA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8299560546875	2	553.832717	1105.65088	-1.4375	-0.00079614	-3.4251	-0.0018969	-4.8626	-0.002693	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.77546	1	8801	8801		31.955	1.4512	1	1728300			14101	2343	9696	9705	16236	16236					0.10228256799223345
HGLNNDIVKAL	11	Unmodified	_HGLNNDIVKAL_					0	0	0		ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.855712890625	2	597.335487	1192.65642	-1.2982	-0.00077545	0.23184	0.00013848	-1.0663	-0.00063697	597.3360702594875	93.892	0.55453	94.09	93.568	94.122	0.19827					16	12	2	0	0	0	0.17457	1	9472	9472		42.864	8.9426	1	96125			14102	3978	9697	9706	16237	16237					0.06779890800362409
HGLRGAAAS	9	Unmodified	_HGLRGAAAS_					0	0	0			REV__ENST00000480290.5_1_7:127991288-127999229:-|nuORF	REV__ENST00000480290.5_1_7:127991288-127999229:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2279052734375	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.64922	1	7117	7117		44.117	5.3107	1	419890	+		14103	27411	9698	9707	16238	16238					0.015265941262214255
HGLRGAAAS	9	Unmodified	_HGLRGAAAS_					0	0	0			REV__ENST00000480290.5_1_7:127991288-127999229:-|nuORF	REV__ENST00000480290.5_1_7:127991288-127999229:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2265625	2	420.227751	838.440949	-0.18786	-7.8944E-05	0.38594	0.00016218	0.19808	8.324E-05	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.78536	1	7301	7301		29.15	0.89528	1	279000	+		14104	27411	9698	9707	16239	16239					0.015265941262214255
HGLRGAAAS	9	Unmodified	_HGLRGAAAS_					0	0	0			REV__ENST00000480290.5_1_7:127991288-127999229:-|nuORF	REV__ENST00000480290.5_1_7:127991288-127999229:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2274475097656	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.76255	1	7914	7914		35.618	5.1146	1	961790	+		14105	27411	9698	9707	16240	16240					0.015265941262214255
HGLRGKGD	8	Unmodified	_HGLRGKGD_					0	0	0		ENST00000526955.1_1_11:125281302-125301285:+|nuORF	ENST00000526955.1_1_11:125281302-125301285:+|nuORF	ENST00000526955.1_1_11:125281302-125301285:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2268981933594	2	420.227751	838.440949	-0.26172	-0.00010998	0.48315	0.00020303	0.22143	9.305E-05	420.2278427718772	76.28	2.2676	76.231	74.595	76.863	-0.048271					136	69	3	0	0	0	0.89962	1	7525	7525		38.806	1.647	1	253020			14106	13272	9699	9708	16241	16241					0.015265941262327942
HGLRLAAPCRK	11	Unmodified	_HGLRLAAPCRK_					0	0	0		ENSG00000101213|ENST00000542869|PTK6	ENSG00000101213|ENST00000542869|PTK6	ENSG00000101213|ENST00000542869|PTK6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3543090820312	2	611.353491	1220.69243	2.4219	0.0014807	2.2601	0.0013817	4.682	0.0028624	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.64498	1	10183	10183		39.253	5.0803	1	12656000			14107	1915	9700	9709	16242	16242					0.09091069496230375
HGLRLAAPCRK	11	Unmodified	_HGLRLAAPCRK_					0	0	0		ENSG00000101213|ENST00000542869|PTK6	ENSG00000101213|ENST00000542869|PTK6	ENSG00000101213|ENST00000542869|PTK6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3543701171875	2	611.353491	1220.69243	0.85003	0.00051967	3.227	0.0019728	4.077	0.0024925	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.5603	1	9717	9717		47.657	4.7931	1	6836400			14108	1915	9700	9709	16243	16243					0.09091069496230375
HGLRRAIPP	9	Unmodified	_HGLRRAIPP_					0	0	0			REV__ENSG00000037637|ENST00000375592|FBXO42	REV__ENSG00000037637|ENST00000375592|FBXO42	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.8072814941406	2	508.809242	1015.60393	-0.85492	-0.00043499	-1.8659	-0.00094938	-2.7208	-0.0013844	508.8081854694424	90.498	1.1947	90.498	89.91	91.105	0					75	27	4	0	0	0	0.7932	1	8805	8805		25.45	6.3466	1	968460	+		14109	16297	9701	9710	16244	16244					0.09675397248076933
HGLRRAIPP	9	Unmodified	_HGLRRAIPP_					0	0	0			REV__ENSG00000037637|ENST00000375592|FBXO42	REV__ENSG00000037637|ENST00000375592|FBXO42	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.80767822265625	2	508.809242	1015.60393	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.426	1	83.485	82.985	83.985	0.05925								0	0	0	0.29103	1	8387	8387		40.573	4.9543	1		+		14110	16297	9701	9710	16245	16245					0.09675397248076933
HGLRRVPPAS	10	Unmodified	_HGLRRVPPAS_					0	0	0			REV__ENSG00000196182|ENST00000373132|STK40	REV__ENSG00000196182|ENST00000373132|STK40	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3181762695312	2	545.317432	1088.62031	-0.68757	-0.00037494	-0.58844	-0.00032088	-1.276	-0.00069583	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.77314	3	8390	8390;8402;8510		40.778	9.2484	1	3608000	+		14111	23100	9702	9711	16246;16247;16248	16246					0.07954478414171717
HGLRRVPPAS	10	Unmodified	_HGLRRVPPAS_					0	0	0			REV__ENSG00000196182|ENST00000373132|STK40	REV__ENSG00000196182|ENST00000373132|STK40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.31689453125	2	545.317432	1088.62031	1.9901	0.0010853	-3.3293	-0.0018155	-1.3392	-0.00073027	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.8651	1	9216	9216		25.574	1.3713	1	4704900	+		14112	23100	9702	9711	16249	16249					0.07954478414171717
HGLRRVPPAS	10	Unmodified	_HGLRRVPPAS_					0	0	0			REV__ENSG00000196182|ENST00000373132|STK40	REV__ENSG00000196182|ENST00000373132|STK40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3184204101562	2	545.317432	1088.62031	1.1684	0.00063715	-2.5262	-0.0013776	-1.3578	-0.00074041	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.77314	1	8900	8900		40.778	9.2484	1	4705800	+		14113	23100	9702	9711	16250	16250					0.07954478414171717
HGLRRVPPAS	10	Unmodified	_HGLRRVPPAS_					0	0	0			REV__ENSG00000196182|ENST00000373132|STK40	REV__ENSG00000196182|ENST00000373132|STK40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3164672851562	2	545.317432	1088.62031	0.15103	8.2357E-05	-1.6523	-0.00090103	-1.5013	-0.00081867	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.82886	2	8807	8605;8807		37.812	6.9398	1	5755000	+		14114	23100	9702	9711	16251;16252	16252					0.07954478414171717
HGLRRVPPAS	10	Unmodified	_HGLRRVPPAS_					0	0	0			REV__ENSG00000196182|ENST00000373132|STK40	REV__ENSG00000196182|ENST00000373132|STK40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167724609375	2	545.317432	1088.62031	0.15577	8.4944E-05	-1.2744	-0.00069494	-1.1186	-0.00060999	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.82886	3	8998	8998;9046;9130		37.812	7.3079	1	17220000	+		14115	23100	9702	9711	16253;16254;16255	16253					0.07954478414171717
HGLRRVPPAS	10	Unmodified	_HGLRRVPPAS_					0	0	0			REV__ENSG00000196182|ENST00000373132|STK40	REV__ENSG00000196182|ENST00000373132|STK40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.317626953125	2	545.317432	1088.62031	0.73643	0.00040159	-2.1406	-0.0011673	-1.4042	-0.00076572	545.316117867523	88.493	3.0395	88.643	86.614	89.654	0.15055					258	71	4	0	0	0	0.77314	3	8644	8644;8715;8894		40.778	11.629	1	5181100	+		14116	23100	9702	9711	16256;16257;16258	16256					0.07954478414171717
HGLRRVPPAS	10	Unmodified	_HGLRRVPPAS_					0	0	0			REV__ENSG00000196182|ENST00000373132|STK40	REV__ENSG00000196182|ENST00000373132|STK40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3172607421875	2	545.317432	1088.62031	-1.4651	-0.00079892	0.057523	3.1368E-05	-1.4075	-0.00076755	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.86218	1	8579	8579		32.812	2.4947	1	4998200	+		14117	23100	9702	9711	16259	16259					0.07954478414171717
HGLRRVPPAS	10	Unmodified	_HGLRRVPPAS_					0	0	0			REV__ENSG00000196182|ENST00000373132|STK40	REV__ENSG00000196182|ENST00000373132|STK40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3167724609375	2	545.317432	1088.62031	-1.4674	-0.00080021	-0.051066	-2.7847E-05	-1.5185	-0.00082805	545.3172916402864	93.375	2.3581	93.567	93.147	95.505	0.19239					96	56	3	0	0	0	0.77314	1	9468	9468		40.778	6.6056	1	1075700	+		14118	23100	9702	9711	16260	16260					0.07954478414171717
HGLRRVPPAS	10	Unmodified	_HGLRRVPPAS_					0	0	0			REV__ENSG00000196182|ENST00000373132|STK40	REV__ENSG00000196182|ENST00000373132|STK40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3169555664062	2	545.317432	1088.62031	-0.0069207	-3.774E-06	-1.1928	-0.00065047	-1.1997	-0.00065424	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.86218	1	10532	10532		32.812	1.2826	1	4868200	+		14119	23100	9702	9711	16261	16261					0.07954478414171717
HGLRRVPPAS	10	Unmodified	_HGLRRVPPAS_					0	0	0			REV__ENSG00000196182|ENST00000373132|STK40	REV__ENSG00000196182|ENST00000373132|STK40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3165893554688	2	545.317432	1088.62031	-1.3538	-0.00073823	0.10277	5.6043E-05	-1.251	-0.00068219	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.8545	2	10489	10427;10489		36.447	1.0549	1	5184000	+		14120	23100	9702	9711	16262;16263	16263					0.07954478414171717
HGLSKLQP	8	Unmodified	_HGLSKLQP_					0	0	0		ENST00000276416.10_1_8:22478638-22478791:-|nuORF	ENST00000276416.10_1_8:22478638-22478791:-|nuORF	ENST00000276416.10_1_8:22478638-22478791:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.25592041015625	2	440.255977	878.497401	-1.4867	-0.00065454	0.10608	4.6703E-05	-1.3806	-0.00060783	440.2558792148897	67.228	0.84634	67.361	67.023	67.869	0.13326					70	34	3	0	0	0	0.87479	1	6021	6021		30.504	0	1	457950			14121	9601	9703	9712	16264	16264					0.05329221962904285
HGMEYETD	8	Unmodified	_HGMEYETD_					0	0	0		nc|ENSG00000158055|Q8TE85-3|GRHL3;ENSG00000158055|ENST00000361548|GRHL3;nc|ENSG00000158055|Q8TE85-2|GRHL3;nc|ENSG00000158055|Q8TE85|GRHL3	nc|ENSG00000158055|Q8TE85-3|GRHL3	nc|ENSG00000158055|Q8TE85-3|GRHL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.1854248046875	2	491.184557	980.354561	0.46609	0.00022894	1.5364	0.00075467	2.0025	0.0009836	491.1851925944041	64.496	1.2333	64.62	63.877	65.111	0.12396					67	44	2	0	0	0	0.884	1	5686	5686		33.516	6.8227	1	159550			14122	5459	9704	9713	16265	16265					-0.13640198281314042
HGNDGKLPV	9	Unmodified	_HGNDGKLPV_					0	0	0			REV__ENST00000380172.8_1_9:21854664-21854709:+|nuORF	REV__ENST00000380172.8_1_9:21854664-21854709:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.7480163574219	2	468.748516	935.482479	-1.2414	-0.00058191	1.1326	0.00053089	-0.10883	-5.1013E-05	468.7489417985906	39.365	0.62746	39.318	39.035	39.663	-0.047005					27	14	3	0	0	0	0.78536	1	2843	2843		29.15	6.1071	1	194640	+		14123	25940	9705	9714	16266	16266					0.012157300948956618
HGNLALVYGTY	11	Unmodified	_HGNLALVYGTY_					0	0	0			REV__ENSG00000116138|ENST00000375847|DNAJC16	REV__ENSG00000116138|ENST00000375847|DNAJC16	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3663940429688	2	604.308938	1206.60332	-0.48784	-0.0002948	2.4573	0.001485	1.9695	0.0011902	604.3102897219445	104.66	0.20422	104.64	104.5	104.7	-0.014809					7	4	2	0	0	0	0.17383	1	11283	11283		39.253	4.1008	1	88979	+		14124	18182	9706	9715	16267	16267					0.008285130177455358
HGNLALVYGTY	11	Unmodified	_HGNLALVYGTY_					0	0	0			REV__ENSG00000116138|ENST00000375847|DNAJC16	REV__ENSG00000116138|ENST00000375847|DNAJC16	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3663940429688	2	604.308938	1206.60332	3.2056	0.0019372	-3.4215	-0.0020676	-0.21587	-0.00013045	604.3067139130388	104.67	0.32	104.63	104.45	104.77	-0.04039					15	7	3	0	0	0	0.17502	1	11522	11522		44.377	16.296	1	138760	+		14125	18182	9706	9715	16268	16268					0.008285130177455358
HGNLEKKQKLA	11	Unmodified	_HGNLEKKQKLA_					0	0	0		nc|ENSG00000143951|O95876-2|WDPCP;ENSG00000143951|ENST00000272321|WDPCP;ENST00000409835.5_1_2:63587012-63815411:-|nuORF	nc|ENSG00000143951|O95876-2|WDPCP	nc|ENSG00000143951|O95876-2|WDPCP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3690795898438	2	633.369861	1264.72517	-0.11908	-7.5423E-05	-0.90029	-0.00057022	-1.0194	-0.00064564	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.70737	1	9422	9422		30.318	0	1	2722900			14126	4678	9707	9716	16269	16269					0.10339555100085818
HGNLEKKQKLA	11	Unmodified	_HGNLEKKQKLA_					0	0	0		nc|ENSG00000143951|O95876-2|WDPCP;ENSG00000143951|ENST00000272321|WDPCP;ENST00000409835.5_1_2:63587012-63815411:-|nuORF	nc|ENSG00000143951|O95876-2|WDPCP	nc|ENSG00000143951|O95876-2|WDPCP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3693237304688	2	633.369861	1264.72517	-0.087569	-5.5464E-05	-0.98413	-0.00062332	-1.0717	-0.00067878	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.53361	8	9826	9790;9826;9862;9885;9895;9914;9944;10126		49.536	14.384	1	7059800			14127	4678	9707	9716	16270;16271;16272;16273;16274;16275;16276;16277	16271					0.10339555100085818
HGNLEKKQKLA	11	Unmodified	_HGNLEKKQKLA_					0	0	0		nc|ENSG00000143951|O95876-2|WDPCP;ENSG00000143951|ENST00000272321|WDPCP;ENST00000409835.5_1_2:63587012-63815411:-|nuORF	nc|ENSG00000143951|O95876-2|WDPCP	nc|ENSG00000143951|O95876-2|WDPCP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3690795898438	2	633.369861	1264.72517	1.4714	0.00093196	-2.6119	-0.0016543	-1.1404	-0.0007223	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.66858	3	10216	10132;10144;10216		41.427	15.855	1	11430000			14128	4678	9707	9716	16278;16279;16280	16280					0.10339555100085818
HGNLEKKQKLA	11	Unmodified	_HGNLEKKQKLA_					0	0	0		nc|ENSG00000143951|O95876-2|WDPCP;ENSG00000143951|ENST00000272321|WDPCP;ENST00000409835.5_1_2:63587012-63815411:-|nuORF	nc|ENSG00000143951|O95876-2|WDPCP	nc|ENSG00000143951|O95876-2|WDPCP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3684692382812	2	633.369861	1264.72517	0.88638	0.00056141	-2.1201	-0.0013428	-1.2337	-0.0007814	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.70737	1	9682	9682		30.318	5.7985	1	5166300			14129	4678	9707	9716	16281	16281					0.10339555100085818
HGNLEKKQKLA	11	Unmodified	_HGNLEKKQKLA_					0	0	0		nc|ENSG00000143951|O95876-2|WDPCP;ENSG00000143951|ENST00000272321|WDPCP;ENST00000409835.5_1_2:63587012-63815411:-|nuORF	nc|ENSG00000143951|O95876-2|WDPCP	nc|ENSG00000143951|O95876-2|WDPCP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3685302734375	2	633.369861	1264.72517	1.5976	0.0010119	-2.7562	-0.0017457	-1.1585	-0.00073377	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.59831	2	11728	11716;11728		42.864	7.4315	1	10012000			14130	4678	9707	9716	16282;16283	16283					0.10339555100085818
HGNLIRLAVNE	11	Unmodified	_HGNLIRLAVNE_					0	0	0		ENST00000553841.1_1_14:45369974-45372804:+|nuORF;ENST00000555826.5_1_14:45369638-45373733:+|nuORF;ENSG00000179476|ENST00000325192|C14orf28	ENST00000553841.1_1_14:45369974-45372804:+|nuORF	ENST00000553841.1_1_14:45369974-45372804:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.3455200195312	2	618.346386	1234.67822	2.5351	0.0015676	-3.3685	-0.0020829	-0.83344	-0.00051535	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.65746	2	10587	10587;10637		37.812	2.6595	1	980120			14131	7273	9708	9717	16284;16285	16284					0.0702669554896147
HGNLIRLAVNE	11	Unmodified	_HGNLIRLAVNE_					0	0	0		ENST00000553841.1_1_14:45369974-45372804:+|nuORF;ENST00000555826.5_1_14:45369638-45373733:+|nuORF;ENSG00000179476|ENST00000325192|C14orf28	ENST00000553841.1_1_14:45369974-45372804:+|nuORF	ENST00000553841.1_1_14:45369974-45372804:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.3463134765625	2	618.346386	1234.67822	0.89263	0.00055195	-1.663	-0.0010283	-0.77033	-0.00047633	618.3452359789501	97.829	3.1632	97.989	96.92	100.08	0.16073					214	73	4	0	0	0	0.61369	1	10216	10216		42.864	10.114	1	874220			14132	7273	9708	9717	16286	16286					0.0702669554896147
HGNLIRLAVNE	11	Unmodified	_HGNLIRLAVNE_					0	0	0		ENST00000553841.1_1_14:45369974-45372804:+|nuORF;ENST00000555826.5_1_14:45369638-45373733:+|nuORF;ENSG00000179476|ENST00000325192|C14orf28	ENST00000553841.1_1_14:45369974-45372804:+|nuORF	ENST00000553841.1_1_14:45369974-45372804:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	618.3456420898438	2	618.346386	1234.67822	-1.2296	-0.00076029	0.47164	0.00029164	-0.75792	-0.00046865	618.3465539597456	97.787	3.3462	97.982	96.915	100.26	0.19585					219	77	4	0	0	0	0.65746	1	10073	10073		37.812	0.65241	1	806570			14133	7273	9708	9717	16287	16287					0.0702669554896147
HGNSATGGH	9	Unmodified	_HGNSATGGH_					0	0	0		nc|ENSG00000103194|Q14694-2|USP10;ENSG00000103194|ENST00000219473|USP10;nc|ENSG00000103194|Q14694-3|USP10;ENST00000548656.2_1_14:19411434-19411701:-|nuORF	nc|ENSG00000103194|Q14694-2|USP10;ENST00000548656.2_1_14:19411434-19411701:-|nuORF	nc|ENSG00000103194|Q14694-2|USP10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.1842041015625	2	419.18354	836.352528	-1.7635	-0.00073924	1.4666	0.00061478	-0.2969	-0.00012446	419.18426250816185	99.934	0.99162	100.15	99.734	100.73	0.21511					55	22	3	0	0	0	0.78058	1	10413	10413		30.504	2.2494	1	335410			14134	14825;13621	9709	9718	16288	16288					-0.07219446184228673
HGNSATGGH	9	Unmodified	_HGNSATGGH_					0	0	0		nc|ENSG00000103194|Q14694-2|USP10;ENSG00000103194|ENST00000219473|USP10;nc|ENSG00000103194|Q14694-3|USP10;ENST00000548656.2_1_14:19411434-19411701:-|nuORF	nc|ENSG00000103194|Q14694-2|USP10;ENST00000548656.2_1_14:19411434-19411701:-|nuORF	nc|ENSG00000103194|Q14694-2|USP10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.1846923828125	2	419.18354	836.352528	0.72807	0.0003052	-0.47038	-0.00019718	0.25769	0.00010802	419.1832482670418	100.06	1.0157	100.21	99.721	100.74	0.15073					53	22	3	0	0	0	0.78058	1	10442	10442		30.504	5.0535	1	323170			14135	14825;13621	9709	9718	16289	16289					-0.07219446184228673
HGNVSARKVLL	11	Unmodified	_HGNVSARKVLL_					0	0	0		nc|ENSG00000105639|P52333-2|JAK3;ENSG00000105639|ENST00000458235|JAK3	nc|ENSG00000105639|P52333-2|JAK3	nc|ENSG00000105639|P52333-2|JAK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.3595581054688	2	597.359296	1192.70404	-1.2979	-0.00077532	-0.78886	-0.00047123	-2.0868	-0.0012466	597.3583970456502	100.18	2.7493	100.35	98.666	101.42	0.17199					156	64	4	0	0	0	0.73893	1	10398	10398		24.519	0.31644	1	2737400			14136	2230	9710	9719	16290	16290					0.11539589791232174
HGPGPLPE	8	Unmodified	_HGPGPLPE_					0	0	0			REV__nc|ENSG00000205022|A6NDY0-3|PABPN1L	REV__nc|ENSG00000205022|A6NDY0-3|PABPN1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.2049560546875	2	402.205953	802.397353	3.1805	0.0012792	-3.8193	-0.0015361	-0.63874	-0.00025691	402.20435516833464	98.401	2.1792	98.45	97.455	99.634	0.048157					140	50	4	0	0	0	0.88915	1	10580	10580		35.201	0	1	1692900	+		14137	30167	9711	9720	16291	16291					-0.011750153709044753
HGPHQGWSPG	10	Unmodified	_HGPHQGWSPG_					0	0	0			REV__ENSG00000117419|ENST00000372257|ERI3	REV__ENSG00000117419|ENST00000372257|ERI3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2416381835938	2	530.24139	1058.46823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.92	1	111.97	111.47	112.47	0.041832								0	0	0	0.45132	1	13537	13537		24.203	1.6231	1		+		14138	18260	9712	9721	16292	16292					-0.05866922333370894
HGPNKAFL	8	Unmodified	_HGPNKAFL_					0	0	0			REV__ENST00000396987.7_1_8:41435772-41455860:+|nuORF	REV__ENST00000396987.7_1_8:41435772-41455860:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.240478515625	2	442.24287	882.471186	-1.2774	-0.00056493	-3.033	-0.0013413	-4.3104	-0.0019063	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.86791	4	7565	7479;7497;7565;7597		37.028	13.986	1	716910	+		14139	26153	9713	9722	16293;16294;16295;16296	16295					0.025249527914297687
HGPNKAFL	8	Unmodified	_HGPNKAFL_					0	0	0			REV__ENST00000396987.7_1_8:41435772-41455860:+|nuORF	REV__ENST00000396987.7_1_8:41435772-41455860:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2405090332031	2	442.24287	882.471186	0.098186	4.3422E-05	-4.3565	-0.0019266	-4.2583	-0.0018832	442.2407808543281	79.076	2.7507	79.022	77.456	80.207	-0.053558					222	93	4	0	0	0	0.89457	1	7839	7839		37.028	3.5129	1	344800	+		14140	26153	9713	9722	16297	16297					0.025249527914297687
HGPNKAFL	8	Unmodified	_HGPNKAFL_					0	0	0			REV__ENST00000396987.7_1_8:41435772-41455860:+|nuORF	REV__ENST00000396987.7_1_8:41435772-41455860:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2408752441406	2	442.24287	882.471186	-1.4215	-0.00062863	-2.9443	-0.0013021	-4.3658	-0.0019307	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.79972	4	7781	7664;7675;7781;7945		62.978	24.172	1	1219900	+		14141	26153	9713	9722	16298;16299;16300;16301	16300					0.025249527914297687
HGPNKAFL	8	Unmodified	_HGPNKAFL_					0	0	0			REV__ENST00000396987.7_1_8:41435772-41455860:+|nuORF	REV__ENST00000396987.7_1_8:41435772-41455860:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24053955078125	2	442.24287	882.471186	-1.5813	-0.00069932	-2.7796	-0.0012293	-4.3609	-0.0019286	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.87276	2	7632	7632;7775		46.766	16.263	1	968500	+		14142	26153	9713	9722	16302;16303	16302					0.025249527914297687
HGPNKAFL	8	Unmodified	_HGPNKAFL_					0	0	0			REV__ENST00000396987.7_1_8:41435772-41455860:+|nuORF	REV__ENST00000396987.7_1_8:41435772-41455860:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2411193847656	2	442.24287	882.471186	-0.73522	-0.00032514	-3.8338	-0.0016955	-4.569	-0.0020206	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.88915	2	9363	9262;9363		44.531	8.9128	1	866900	+		14143	26153	9713	9722	16304;16305	16305					0.025249527914297687
HGPPGPLGLL	10	Unmodified	_HGPPGPLGLL_					0	0	0		ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27752685546875	2	479.279452	956.544351	-1.0919	-0.00052333	-3.0273	-0.0014509	-4.1192	-0.0019742	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.86786	1	7984	7984		26.796	0.10319	1	4644500			14144	1034	9714	9723	16306	16306					0.0643408151404401
HGPPGPLGLL	10	Unmodified	_HGPPGPLGLL_					0	0	0		ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27740478515625	2	479.279452	956.544351	-1.5678	-0.00075141	-2.7191	-0.0013032	-4.2869	-0.0020546	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.86786	1	8169	8169		26.796	1.222	1	6441000			14145	1034	9714	9723	16307	16307					0.0643408151404401
HGPQAKPLP	9	Unmodified	_HGPQAKPLP_					0	0	0			REV__nc|ENSG00000164889|P04920-2|SLC4A2	REV__nc|ENSG00000164889|P04920-2|SLC4A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7673645019531	2	472.769252	943.52395	-0.10807	-5.1094E-05	-4.0843	-0.0019309	-4.1924	-0.001982	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.76996	1	8497	8497		33.516	3.0119	1	501240	+		14146	21126	9715	9724	16308	16308					0.04992910854230104
HGPTQKATRVP	11	Unmodified	_HGPTQKATRVP_					0	0	0			REV__nc|ENSG00000188803|Q6ZSJ9-2|SHISA6	REV__nc|ENSG00000188803|Q6ZSJ9-2|SHISA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.332763671875	2	596.333279	1190.652	2.6389	0.0015737	-3.4063	-0.0020313	-0.76734	-0.00045759	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.62614	1	10380	10380		41.427	4.9799	1	1305600	+		14147	23031	9716	9725	16309	16309					0.06430426377460208
HGPVNFLN	8	Unmodified	_HGPVNFLN_					0	0	0		ENST00000506857.5_1_5:61645920-61649125:+|nuORF	ENST00000506857.5_1_5:61645920-61649125:+|nuORF	ENST00000506857.5_1_5:61645920-61649125:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.2321472167969	2	449.232502	896.450451	-0.14348	-6.4457E-05	-4.0788	-0.0018323	-4.2223	-0.0018968	449.2306007992336	83.429	3.7259	83.496	82.088	85.814	0.066719					221	85	3	0	0	0	0.89962	1	8287	8287		38.806	10.552	1	236580			14148	12945	9717	9726	16310	16310					-0.0019163758825015975
HGQAKIIITKS	11	Unmodified	_HGQAKIIITKS_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|18|1|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|18|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.8558959960938	2	598.361505	1194.70846	-0.10487	-6.275E-05	-3.7081	-0.0022188	-3.8129	-0.0022815	598.3593234657415	94.339	4.754	94.774	93.51	98.264	0.43539					199	117	2	0	0	0	0.65746	1	11265	11265		37.812	8.662	1	27641000	+		14149	29633	9718	9727	16311	16311					0.11889054214134376
HGQHGSGSG	9	Unmodified	_HGQHGSGSG_					0	0	0		ENSG00000197915|ENST00000368801|HRNR;CON__Q86YZ3	ENSG00000197915|ENST00000368801|HRNR	ENSG00000197915|ENST00000368801|HRNR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.1759033203125	2	412.175715	822.336878	-1.9151	-0.00078935	1.0472	0.00043162	-0.86789	-0.00035773	412.1764543351216	94.772	2.5614	94.974	94.403	96.965	0.20242					141	60	6	0	0	0	0.74721	1	9610	9610		37.159	1.9584	1	13873000		+	14150	631	9719	9728	16312	16312					-0.08139732701272351
HGQIFESMSPP	11	Unmodified	_HGQIFESMSPP_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	410.8621826171875	3	410.525496	1228.55466	-0.15788	-6.4814E-05	0.85394	0.00035057	0.69606	0.00028575	410.5257114016994	56.503	1.144	56.49	56.243	57.387	-0.012203					108	46	3	0	0	0	0.80228	1	5062	5062		10.104	4.1029	1	1981300	+		14151	20267	9720	9729	16313	16313					-0.05047723613688504
HGQKTCVFL	9	Unmodified	_HGQKTCVFL_					0	0	0			REV__nc|ENSG00000109466|O95198-2|KLHL2	REV__nc|ENSG00000109466|O95198-2|KLHL2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.779052734375	2	516.768394	1031.52224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.99	1	26.951	26.451	27.451	-0.038523								0	0	0	0.30778	1	1259	1259		27.882	3.6795	1		+		14152	29774	9721	9730	16314	16314					0.007735337739404713
HGQLKAKY	8	Unmodified	_HGQLKAKY_					0	0	0			REV__nc|ENSG00000146063|Q8WV44-4|TRIM41	REV__nc|ENSG00000146063|Q8WV44-4|TRIM41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7667541503906	2	472.769252	943.52395	-0.41041	-0.00019403	-3.7134	-0.0017556	-4.1238	-0.0019496	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.9159	1	8324	8324		44.531	0.41427	1	590200	+		14153	19984	9722	9731	16315	16315					0.04992910854218735
HGQLTGECH	9	Unmodified	_HGQLTGECH_					0	0	0			REV__ENST00000584294.1_1_18:2960773-3013274:-|nuORF	REV__ENST00000584294.1_1_18:2960773-3013274:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.7137451171875	2	491.213983	980.413413	1.5007	0.00073715	1.8328	0.00090028	3.3334	0.0016374	491.2146250308536	98.88	1.9734	99.253	98.202	100.18	0.37296					63	48	2	0	0	0	0.20789	1	11983	11983		68.787	5.4806	1	1395100	+		14154	29076	9723	9732	16316	16316					-0.07757677196309487
HGRHRLVGG	9	Unmodified	_HGRHRLVGG_					0	0	0			REV__ENST00000304987.3_1_11:111473265-111486986:+|nuORF	REV__ENST00000304987.3_1_11:111473265-111486986:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7801818847656	2	494.781016	987.54748	-0.98597	-0.00048784	-0.10917	-5.4013E-05	-1.0951	-0.00054185	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.77546	1	8200	8200		31.955	2.8053	1	385180	+		14155	24811	9724	9733	16317	16317					0.053207694114121296
HGRHRLVGG	9	Unmodified	_HGRHRLVGG_					0	0	0			REV__ENST00000304987.3_1_11:111473265-111486986:+|nuORF	REV__ENST00000304987.3_1_11:111473265-111486986:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7801513671875	2	494.781016	987.54748	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.224	1	86.373	85.873	86.873	0.14902								0	0	0	0.31088	1	8472	8472		26.796	1.3459	1		+		14156	24811	9724	9733	16318	16318					0.053207694114121296
HGRKKRRKR	9	Unmodified	_HGRKKRRKR_					0	0	0			REV__nc|ENSG00000079263|Q13342-3|SP140	REV__nc|ENSG00000079263|Q13342-3|SP140	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3543090820312	2	611.397413	1220.78027	1.8361	0.0011226	2.8207	0.0017246	4.6568	0.0028472	611.3990809028834	95.848	0.24236	96.268	96.113	96.355	0.42051					7	5	2	0	0	0	0.20789	1	11482	11482		23.042	6.5693	1	32701	+		14157	16778	9725	9734	16319	16319					0.1787145120185869
HGRVGATAA	9	Unmodified	_HGRVGATAA_					0	0	0		ENST00000511203.1_1_4:100869836-100870579:-|nuORF;ENST00000511348.1_1_4:100870420-100870579:-|nuORF;nc|ENSG00000105968|Q71UI9-5|H2AZ2;nc|ENSG00000105968|Q71UI9-2|H2AZ2;nc|ENSG00000105968|Q71UI9-4|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENSG00000105968|ENST00000308153|H2AZ2;ENST00000511319.5_1_4:100869621-100871200:-|nuORF	ENST00000511203.1_1_4:100869836-100870579:-|nuORF;nc|ENSG00000105968|Q71UI9-4|H2AZ2	nc|ENSG00000105968|Q71UI9-4|H2AZ2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22705078125	2	420.227751	838.440949	0.51188	0.00021511	-0.42574	-0.00017891	0.086147	3.6201E-05	420.22745728477395	76.673	2.5132	76.808	74.515	77.028	0.13478					135	81	3	0	0	0	0.71772	1	7083	7083		39.253	2.0937	1	323390			14158	2268;13015	9726	9735	16320	16320					0.015265941262214255
HGSDGMPH	8	Unmodified	_HGSDGMPH_					0	0	0			REV__ENST00000488545.1_1_3:72148009-72149123:-|nuORF	REV__ENST00000488545.1_1_3:72148009-72149123:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1838684082031	2	419.169044	836.323536	1.7048	0.00071461	2.4511	0.0010274	4.1559	0.001742	419.1694218046899	92.193	0.21381	92.64	92.519	92.733	0.44661					6	4	2	0	0	0	0.4196	1	10949	10949		29.842	0	1	31676	+		14159	27597	9727	9736	16321	16321					-0.10117306804886539
HGSFQWNVF	9	Unmodified	_HGSFQWNVF_					0	0	0			REV__ENST00000368520.1_1_10:135345455-135368187:+|nuORF	REV__ENST00000368520.1_1_10:135345455-135368187:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3120727539062	2	561.261791	1120.50903	-0.48245	-0.00027078	-3.9476	-0.0022156	-4.4301	-0.0024864	561.2591971297342	58.362	1.1278	58.754	58.315	59.443	0.39209					67	26	3	0	0	0	0.20789	1	6104	6104		63.306	11.007	1	659990	+		14160	25598	9728	9737	16322	16322					-0.04640581013791234
HGSIPLIGKP	10	Unmodified	_HGSIPLIGKP_					0	0	0			REV__ENST00000497655.1_1_1:202932056-202932895:-|nuORF	REV__ENST00000497655.1_1_1:202932056-202932895:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8057556152344	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.82886	1	8124	8124		37.812	0.65241	1	1874600	+		14161	27774	9729	9738	16323	16323					0.08902039576844345
HGSLMVILE	9	Unmodified	_HGSLMVILE_					0	0	0		ENSG00000173546|ENST00000308508|CSPG4;ENST00000560634.1_1_15:84858634-84860056:+|nuORF;ENST00000558229.1_15:82983798-82985220:-|nuORF	ENSG00000173546|ENST00000308508|CSPG4	ENSG00000173546|ENST00000308508|CSPG4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.2161560058594	2	499.770603	997.526652	1.2309	0.00061515	-3.7176	-0.001858	-2.4868	-0.0012428	500.2695229517475	23.648	0.29963	23.074	22.878	23.178	-0.57415					9	6	2	0	0	0	0.20789	1	1056	1056		31.955	1.4512	1	30913			14162	6866	9730	9739	16324	16324					0.027789981968794564
HGSLRISN	8	Unmodified	_HGSLRISN_					0	0	0		ENSG00000173838|ENST00000311269|MARCHF10	ENSG00000173838|ENST00000311269|MARCHF10	ENSG00000173838|ENST00000311269|MARCHF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.24139404296875	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.89043	1	7690	7690		35.618	1.4457	1	1068200			14163	6890	9731	9740	16325	16325					0.021228632977113193
HGSLRISN	8	Unmodified	_HGSLRISN_					0	0	0		ENSG00000173838|ENST00000311269|MARCHF10	ENSG00000173838|ENST00000311269|MARCHF10	ENSG00000173838|ENST00000311269|MARCHF10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2408447265625	2	442.240858	882.467164	0.21245	9.3954E-05	-0.1421	-6.2841E-05	0.070351	3.1112E-05	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.8537	1	9439	9439		25.574	0.12388	1	1030200			14164	6890	9731	9740	16326	16326					0.021228632977113193
HGSTALRARPV	11	Unmodified	_HGSTALRARPV_					0	0	0			REV__ENST00000453096.6_1_11:18343889-18344213:+|nuORF	REV__ENST00000453096.6_1_11:18343889-18344213:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.8336181640625	2	582.833446	1163.65234	-0.40613	-0.0002367	-0.9644	-0.00056209	-1.3705	-0.00079879	582.832911894326	94.456	2.7605	94.456	93.622	96.382	0					111	64	3	0	0	0	0.7144	1	9380	9380		29.17	0	1	367730	+		14165	26908	9732	9741	16327	16327					0.07705846097314861
HGSVMIIL	8	Unmodified	_HGSVMIIL_					0	0	0			REV__ENST00000491911.5_1_9:140506613-140506760:+|nuORF	REV__ENST00000491911.5_1_9:140506613-140506760:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2518310546875	2	435.249306	868.484059	1.6099	0.00070073	2.9528	0.0012852	4.5628	0.001986	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.86791	1	8278	8278		28.254	0.37203	1	3370400	+		14166	27665	9733	9742	16328	16328					0.04455647859299461
HGTLAKKL	8	Unmodified	_HGTLAKKL_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.2731628417969	2	434.27417	866.533787	-0.474	-0.00020585	-0.78373	-0.00034035	-1.2577	-0.0005462	434.2735892156423	82.201	1.4504	82.627	82.08	83.531	0.42646					66	35	3	0	0	0	0.86791	1	9495	9495		28.254	0	1	1211300	+		14167	19182	9734	9743	16329	16329					0.09518098859598467
HGTLIIGLYL	10	Unmodified	_HGTLIIGLYL_					0	0	0			REV__ENST00000435469.2_1_17:66099171-66110645:+|nuORF	REV__ENST00000435469.2_1_17:66099171-66110645:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3280029296875	2	550.329142	1098.64373	0.24684	0.00013584	-3.804	-0.0020934	-3.5571	-0.0019576	550.327086838159	99.973	1.2029	100.19	99.606	100.81	0.21511					73	27	4	0	0	0	0.6398	1	10439	10439		47.916	10.756	1	361560	+		14168	26673	9735	9744	16330	16330					0.09835479408116043
HGTPKFYVPE	10	Unmodified	_HGTPKFYVPE_					0	0	0			REV__chr17:76528611-76531460|45|13.98|0.59|4.57|-|ENST00000589342|CYGB,CYGB	REV__chr17:76528611-76531460|45|13.98|0.59|4.57|-|ENST00000589342|CYGB,CYGB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.795654296875	2	587.798206	1173.58186	-0.61168	-0.00035955	-3.8986	-0.0022916	-4.5103	-0.0026511	587.7963484848887	51.573	0.62993	52.008	51.7	52.33	0.43505					40	14	4	0	0	0	0.51302	1	5119	5119		54.776	3.2486	1	1070700	+		14169	15666	9736	9745	16331	16331					0.0020112798899845075
HGTVAWIN	8	Unmodified	_HGTVAWIN_					0	0	0			REV__nc|ENSG00000255374|P59539|TAS2R45	REV__nc|ENSG00000255374|P59539|TAS2R45	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.3080749511719	2	449.232502	896.450451	-0.14359	-6.4506E-05	-3.7766	-0.0016966	-3.9202	-0.0017611	449.23072297343276	81.045	1.8175	81.109	80.313	82.13	0.064384					115	45	3	0	0	0	0.4196	1	7986	7986		25.45	20.363	1	94843	+		14170	30242	9737	9746	16332	16332					-0.0019163758825015975
HGVAGAVAVF	10	Unmodified	_HGVAGAVAVF_					0	0	0		ENST00000492220.1_1_1:150381497-150445807:+|nuORF;nc|ENSG00000163125|Q5VT52-2|RPRD2;nc|ENSG00000163125|Q5VT52-3|RPRD2;ENSG00000163125|ENST00000369068|RPRD2	ENST00000492220.1_1_1:150381497-150445807:+|nuORF	ENST00000492220.1_1_1:150381497-150445807:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2535400390625	2	464.255977	926.497401	-1.597	-0.00074142	-2.6107	-0.001212	-4.2077	-0.0019534	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.86786	1	7990	7990		26.796	1.3459	1	1324500			14171	5768	9738	9747	16333	16333					0.031212219629082938
HGVAIGLLDVL	11	Unmodified	_HGVAIGLLDVL_					0	0	0			REV__ENST00000464110.1_1_22:24179249-24180975:-|nuORF	REV__ENST00000464110.1_1_22:24179249-24180975:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8307495117188	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.70623	1	9159	9159		30.504	0	1	6029400	+		14172	17118	9739	9748	16334	16334					0.10094577919812764
HGVAIGLLDVL	11	Unmodified	_HGVAIGLLDVL_					0	0	0			REV__ENST00000464110.1_1_22:24179249-24180975:-|nuORF	REV__ENST00000464110.1_1_22:24179249-24180975:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8305053710938	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.61774	2	10633	10599;10633		42.396	0	1	5381700	+		14173	17118	9739	9748	16335;16336	16336					0.10094577919812764
HGVAVRSN	8	Unmodified	_HGVAVRSN_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22735595703125	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.884	1	7279	7279		33.516	1.5607	1	419890			14174	8298	9740	9749	16337	16337					0.015265941262327942
HGVAVRSN	8	Unmodified	_HGVAVRSN_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2273864746094	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.89043	4	7765	7624;7765;7835;7881		44.117	1.647	1	743780			14175	8298	9740	9749	16338;16339;16340;16341	16339					0.015265941262327942
HGVAVRSN	8	Unmodified	_HGVAVRSN_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2268371582031	2	420.227751	838.440949	-0.26172	-0.00010998	0.48315	0.00020303	0.22143	9.305E-05	420.2278427718772	76.28	2.2676	76.231	74.595	76.863	-0.048271					136	69	3	0	0	0	0.90523	1	7515	7515		40.778	5.1599	1	253020			14176	8298	9740	9749	16342	16342					0.015265941262327942
HGVAVRSN	8	Unmodified	_HGVAVRSN_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.22760009765625	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.89043	4	7823	7747;7823;7855;8093		44.117	5.1599	1	888480			14177	8298	9740	9749	16343;16344;16345;16346	16344					0.015265941262327942
HGVAVRSN	8	Unmodified	_HGVAVRSN_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.225830078125	2	420.227751	838.440949	2.3003	0.00096666	-2.0316	-0.00085375	0.26868	0.00011291	420.2267541958877	76.314	2.1809	76.362	74.634	76.815	0.047974					151	68	3	0	0	0	0.87922	1	7378	7378		31.955	6.5047	1	250270			14178	8298	9740	9749	16347	16347					0.015265941262327942
HGVAVRSN	8	Unmodified	_HGVAVRSN_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2273254394531	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.87479	2	7922	7626;7922		35.618	0	1	961790			14179	8298	9740	9749	16348;16349	16349					0.015265941262327942
HGVAVRSN	8	Unmodified	_HGVAVRSN_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2272033691406	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.88185	3	7618	7547;7618;7660		35.618	4.9302	1	831720			14180	8298	9740	9749	16350;16351;16352	16351					0.015265941262327942
HGVAVRSN	8	Unmodified	_HGVAVRSN_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22711181640625	2	420.227751	838.440949	0.51188	0.00021511	-0.42574	-0.00017891	0.086147	3.6201E-05	420.22745728477395	76.673	2.5132	76.808	74.515	77.028	0.13478					135	81	3	0	0	0	0.91472	1	7065	7065		44.117	8.4985	1	323390			14181	8298	9740	9749	16353	16353					0.015265941262327942
HGVAVRSN	8	Unmodified	_HGVAVRSN_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22613525390625	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.884	3	7904	7360;7394;7904		44.117	6.9577	1	678130			14182	8298	9740	9749	16354;16355;16356	16356					0.015265941262327942
HGVAVRSN	8	Unmodified	_HGVAVRSN_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2271728515625	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.86677	5	7339	7339;7372;7393;7453;7589		45.972	11.8	1	634680			14183	8298	9740	9749	16357;16358;16359;16360;16361	16357					0.015265941262327942
HGVKNLVF	8	Unmodified	_HGVKNLVF_					0	0	0		nc|ENSG00000117308|Q14376-2|GALE;ENSG00000117308|ENST00000617979|GALE;ENST00000459934.5_1_1:24122658-24127224:-|nuORF	nc|ENSG00000117308|Q14376-2|GALE	nc|ENSG00000117308|Q14376-2|GALE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26397705078125	2	457.266345	912.518136	-1.1625	-0.00053158	-3.3651	-0.0015388	-4.5277	-0.0020703	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.86288	1	7826	7826		26.796	0.10319	1	4732500			14184	2970	9741	9750	16362	16362					0.05837812342565485
HGVKNLVF	8	Unmodified	_HGVKNLVF_					0	0	0		nc|ENSG00000117308|Q14376-2|GALE;ENSG00000117308|ENST00000617979|GALE;ENST00000459934.5_1_1:24122658-24127224:-|nuORF	nc|ENSG00000117308|Q14376-2|GALE	nc|ENSG00000117308|Q14376-2|GALE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26373291015625	2	457.266345	912.518136	-1.5615	-0.00071403	-2.9129	-0.001332	-4.4744	-0.002046	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.88915	1	8038	8038		35.201	4.6971	1	4061400			14185	2970	9741	9750	16363	16363					0.05837812342565485
HGVQPSVIIL	10	Unmodified	_HGVQPSVIIL_					0	0	0		nc|ENSG00000094841|Q96BW1-3|UPRT;ENST00000462237.5_1_X:74514443-74523343:+|nuORF;ENSG00000094841|ENST00000373383|UPRT	nc|ENSG00000094841|Q96BW1-3|UPRT	nc|ENSG00000094841|Q96BW1-3|UPRT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8167114257812	2	531.818941	1061.62333	0.49482	0.00026316	-4.4068	-0.0023436	-3.912	-0.0020805	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.86348	1	10072	10072		31.53	4.8369	1	1227700			14186	1713	9742	9751	16364	16364					0.09498308748334239
HGVRALIRAN	10	Unmodified	_HGVRALIRAN_					0	0	0			REV__ENSG00000145040|ENST00000273610|UCN2	REV__ENSG00000145040|ENST00000273610|UCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8297119140625	2	553.830706	1105.64686	-0.78391	-0.00043415	-0.44569	-0.00024684	-1.2296	-0.00068099	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.85934	1	8953	8953		35.618	5.1146	1	1489800	+		14187	19923	9743	9752	16365	16365					0.09826167305527633
HGVRALIRAN	10	Unmodified	_HGVRALIRAN_					0	0	0			REV__ENSG00000145040|ENST00000273610|UCN2	REV__ENSG00000145040|ENST00000273610|UCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8298950195312	2	553.830706	1105.64686	2.0416	0.0011307	-3.0404	-0.0016839	-0.99881	-0.00055317	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.86452	3	9431	9431;9479;9491		30.504	4.9296	1	5457600	+		14188	19923	9743	9752	16366;16367;16368	16366					0.09826167305527633
HGVRALIRAN	10	Unmodified	_HGVRALIRAN_					0	0	0			REV__ENSG00000145040|ENST00000273610|UCN2	REV__ENSG00000145040|ENST00000273610|UCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8302001953125	2	553.830706	1105.64686	1.198	0.00066348	-2.4064	-0.0013328	-1.2084	-0.00066928	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.86589	1	9182	9182		29.15	5.6269	1	1689700	+		14189	19923	9743	9752	16369	16369					0.09826167305527633
HGVRALIRAN	10	Unmodified	_HGVRALIRAN_					0	0	0			REV__ENSG00000145040|ENST00000273610|UCN2	REV__ENSG00000145040|ENST00000273610|UCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8297119140625	2	553.830706	1105.64686	1.287	0.00071279	-2.2482	-0.0012451	-0.96123	-0.00053236	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.84112	3	9311	9276;9311;9335		37.159	10.466	1	5348100	+		14190	19923	9743	9752	16370;16371;16372	16371					0.09826167305527633
HGVRALIRAN	10	Unmodified	_HGVRALIRAN_					0	0	0			REV__ENSG00000145040|ENST00000273610|UCN2	REV__ENSG00000145040|ENST00000273610|UCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.82958984375	2	553.830706	1105.64686	0.28171	0.00015602	-1.2087	-0.0006694	-0.92696	-0.00051338	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.86718	1	8952	8952		27.882	1.1893	1	6402500	+		14191	19923	9743	9752	16373	16373					0.09826167305527633
HGVRALIRAN	10	Unmodified	_HGVRALIRAN_					0	0	0			REV__ENSG00000145040|ENST00000273610|UCN2	REV__ENSG00000145040|ENST00000273610|UCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8297729492188	2	553.830706	1105.64686	0.76565	0.00042404	-1.6754	-0.00092791	-0.9098	-0.00050387	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.86452	1	8979	8979		30.504	0.18592	1	6029400	+		14192	19923	9743	9752	16374	16374					0.09826167305527633
HGVRALIRAN	10	Unmodified	_HGVRALIRAN_					0	0	0			REV__ENSG00000145040|ENST00000273610|UCN2	REV__ENSG00000145040|ENST00000273610|UCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8298950195312	2	553.830706	1105.64686	-1.4397	-0.00079733	0.48085	0.00026631	-0.95882	-0.00053102	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.85934	1	9003	9003		35.618	0	1	5453100	+		14193	19923	9743	9752	16375	16375					0.09826167305527633
HGVRALIRAN	10	Unmodified	_HGVRALIRAN_					0	0	0			REV__ENSG00000145040|ENST00000273610|UCN2	REV__ENSG00000145040|ENST00000273610|UCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8295288085938	2	553.830706	1105.64686	0.37109	0.00020552	-1.4521	-0.0008042	-1.081	-0.00059868	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.86589	1	10421	10421		29.15	1.0681	1	1786500	+		14194	19923	9743	9752	16376	16376					0.09826167305527633
HGVRALIRAN	10	Unmodified	_HGVRALIRAN_					0	0	0			REV__ENSG00000145040|ENST00000273610|UCN2	REV__ENSG00000145040|ENST00000273610|UCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.830322265625	2	553.830706	1105.64686	0.84671	0.00046893	-1.3221	-0.00073225	-0.47544	-0.00026331	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.81018	2	10668	10668;10764		38.806	0.99462	1	5381700	+		14195	19923	9743	9752	16377;16378	16377					0.09826167305527633
HGVRVLTN	8	Unmodified	_HGVRVLTN_					0	0	0		nc|ENSG00000143493|Q9NVH2-4|INTS7;nc|ENSG00000143493|Q9NVH2-2|INTS7;ENSG00000143493|ENST00000366994|INTS7;nc|ENSG00000143493|Q9NVH2-3|INTS7	nc|ENSG00000143493|Q9NVH2-4|INTS7	nc|ENSG00000143493|Q9NVH2-4|INTS7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.2587890625	2	448.259051	894.503549	-1.7824	-0.000799	1.7883	0.00080162	0.0058491	2.6219E-06	448.2597133351224	89.882	2.6909	90.057	88.956	91.647	0.17579					189	63	5	0	0	0	0.86677	1	8945	8945		27.882	7.4004	1	2344600			14196	4636	9744	9753	16379	16379					0.05207740194418875
HGVTVDNR	8	Unmodified	_HGVTVDNR_					0	0	0		ENSG00000112293|ENST00000230036|GPLD1	ENSG00000112293|ENST00000230036|GPLD1	ENSG00000112293|ENST00000230036|GPLD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.23236083984375	2	449.230491	896.446428	-0.14348	-6.4457E-05	0.39856	0.00017905	0.25508	0.00011459	449.2306007992336	83.429	3.7259	83.496	82.088	85.814	0.066719					221	85	3	0	0	0	0.89494	1	8323	8323		37.159	0	1	236580			14197	2651	9745	9754	16380	16380					-0.0059372708195724044
HGVYKKSIFV	10	Unmodified	_HGVYKKSIFV_					0	0	0		nc|ENSG00000165264|O95139-2|NDUFB6;ENSG00000165264|ENST00000379847|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3428955078125	2	589.340041	1176.66553	0.82336	0.00048524	4.113	0.002424	4.9364	0.0029092	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.86348	1	11272	11272		31.53	2.3598	1	9460500			14198	6064	9746	9755	16381	16381					0.0842628415668969
HGWKYSRR	8	Unmodified	_HGWKYSRR_					0	0	0		ENST00000314138.10_1_11:8710898-8710934:+|nuORF	ENST00000314138.10_1_11:8710898-8710934:+|nuORF	ENST00000314138.10_1_11:8710898-8710934:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167724609375	2	545.288674	1088.5628	0.14766	8.0519E-05	-4.2459	-0.0023152	-4.0982	-0.0022347	545.2863163154524	88.081	0.90133	88.282	87.8	88.701	0.20114					30	21	2	0	0	0	0.4196	1	8723	8723		31.955	0	1	59335			14199	9960	9747	9756	16382	16382					0.02205636208600481
HGYENPTYK	9	Unmodified	_HGYENPTYK_					0	0	0		nc|ENSG00000084234|Q06481-6|APLP2;nc|ENSG00000084234|Q06481-5|APLP2;nc|ENSG00000084234|Q06481-4|APLP2;nc|ENSG00000084234|Q06481-2|APLP2;ENSG00000084234|ENST00000338167|APLP2;nc|ENSG00000084234|Q06481|APLP2;ENST00000533860.5_1_11:130009456-130013340:+|nuORF	nc|ENSG00000084234|Q06481-6|APLP2	nc|ENSG00000084234|Q06481-6|APLP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.7567138671875	2	554.756538	1107.49852	0.24503	0.00013593	-0.13422	-7.4457E-05	0.11082	6.1477E-05	554.7563503789543	25.372	1.2168	25.044	24.613	25.83	-0.32825					68	27	4	0	0	0	0.018862	3	1302	1289;1302;1316		126.24	60.118	1	931890			14200	14791	9748	9757	16383;16384;16385	16384					-0.050926084588581944
HGYENPTYK	9	Unmodified	_HGYENPTYK_					0	0	0		nc|ENSG00000084234|Q06481-6|APLP2;nc|ENSG00000084234|Q06481-5|APLP2;nc|ENSG00000084234|Q06481-4|APLP2;nc|ENSG00000084234|Q06481-2|APLP2;ENSG00000084234|ENST00000338167|APLP2;nc|ENSG00000084234|Q06481|APLP2;ENST00000533860.5_1_11:130009456-130013340:+|nuORF	nc|ENSG00000084234|Q06481-6|APLP2	nc|ENSG00000084234|Q06481-6|APLP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7564086914062	2	554.756538	1107.49852	2.4247	0.0013451	-2.4916	-0.0013822	-0.066905	-3.7116E-05	554.7550173391015	25.378	1.0261	24.947	24.499	25.525	-0.4311					63	23	4	0	0	0	0.045756	4	1314	1293;1304;1314;1328		109.48	58.143	1	1018600			14201	14791	9748	9757	16386;16387;16388;16389	16388					-0.050926084588581944
HGYFHGRVF	9	Unmodified	_HGYFHGRVF_					0	0	0			REV__nc|ENSG00000104812|P13807-2|GYS1;REV__ENSG00000111713|ENST00000261195|GYS2	REV__nc|ENSG00000104812|P13807-2|GYS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.7784423828125	2	560.277775	1118.541	0.093873	5.2595E-05	-4.1912	-0.0023482	-4.0974	-0.0022957	560.7775770085183	31.883	0.63901	31.832	31.642	32.281	-0.051031					15	13	2	0	0	0	0.76996	1	1836	1836		33.516	6.8227	1	62293	+		14202	17473;17891	9749	9758	16390	16390					-0.013531685399584603
HGYRAAIL	8	Unmodified	_HGYRAAIL_					0	0	0			REV__ENSG00000141965|ENST00000269856|FEM1A	REV__ENSG00000141965|ENST00000269856|FEM1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.75384521484375	2	450.756144	899.497735	-0.14159	-6.3823E-05	-4.3192	-0.0019469	-4.4608	-0.0020107	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.89457	1	7738	7738		37.028	5.0736	1	109620	+		14203	19716	9750	9759	16391	16391					0.043966416827515786
HHAQVSPH	8	Unmodified	_HHAQVSPH_					0	0	0			REV__nc|ENSG00000204842|Q99700|ATXN2	REV__nc|ENSG00000204842|Q99700|ATXN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7252502441406	2	456.725375	911.436198	0.16797	7.6717E-05	3.5011	0.001599	3.669	0.0016757	456.7269928347912	77.61	0.69723	77.659	77.243	77.94	0.04969					44	30	2	0	0	0	0.89962	1	7600	7600		38.806	3.6054	1	77671	+		14204	30163	9751	9760	16392	16392					-0.023062900165314204
HHDFDEVCND	10	Unmodified	_HHDFDEVCND_					0	0	0			REV__ENSG00000099904|ENST00000334554|ZDHHC8	REV__ENSG00000099904|ENST00000334554|ZDHHC8	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.7354736328125	2	615.727652	1229.44075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.182	1	23.243	22.743	23.743	0.060431								0	0	0	0.45132	1	752	752		21.96	3.6355	1		+		14205	17115	9752	9761	16393	16393					-0.16479238446595446
HHHFHHAP	8	Unmodified	_HHHFHHAP_					0	0	0			REV__ENSG00000184083|ENST00000375180|FAM120C	REV__ENSG00000184083|ENST00000375180|FAM120C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.2400207519531	2	510.238984	1018.46342	0.25586	0.00013055	1.2416	0.00063351	1.4975	0.00076406	510.2395069472448	36.277	0.59363	36.217	35.934	36.528	-0.060333					31	17	2	0	0	0	0.91333	1	1987	1987		43.626	3.0534	1	136960	+		14206	22644	9753	9762	16394	16394					-0.04507761685499645
HHKFSNIR	8	Unmodified	_HHKFSNIR_					0	0	0			REV__ENST00000285518.10_1_8:6616363-6616528:+|nuORF	REV__ENST00000285518.10_1_8:6616363-6616528:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.2546997070312	2	519.783225	1037.5519	0.48918	0.00025427	1.8943	0.00098464	2.3835	0.0012389	519.7840708152112	49.29	1.4986	50.194	49.369	50.868	0.90424					54	36	2	0	0	0	0.4196	1	4701	4701		18.324	0	1	636570	+		14207	24635	9754	9763	16395	16395					0.034622338343069714
HHLFGLLRK	9	Unmodified	_HHLFGLLRK_					0	0	0			REV__ENST00000609131.1_1_9:4676681-4679417:-|nuORF	REV__ENST00000609131.1_1_9:4676681-4679417:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.841552734375	2	560.840542	1119.66653	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.53	1	115.51	115.01	116.01	-0.02433								0	0	0	0.31472	1	12793	12793		25.45	6.0902	1		+		14208	29407	9755	9764	16396	16396					0.11148543316267023
HHLPHETSRLE	11	Unmodified	_HHLPHETSRLE_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.5651550292969	3	452.565342	1354.6742	0.6163	0.00027892	-0.46964	-0.00021254	0.14666	6.6375E-05	452.5650072930857	17.725	0.36772	17.701	17.541	17.908	-0.024033					48	19	4	0	0	0	0.64964	1	264	264		38.714	1.2059	1	491340			14209	5220	9756	9765	16397	16397					0.011046060552416748
HHLPHETSRLE	11	Unmodified	_HHLPHETSRLE_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.56524658203125	3	452.565342	1354.6742	-0.1563	-7.0734E-05	0.079916	3.6167E-05	-0.076379	-3.4567E-05	452.56532772758356	18.343	1.1265	17.867	17.611	18.738	-0.47694					61	24	5	0	0	0	0.74771	1	390	390		22.562	0	1	791560			14210	5220	9756	9765	16398	16398					0.011046060552416748
HHLPHETSRLE	11	Unmodified	_HHLPHETSRLE_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.56549072265625	3	452.565342	1354.6742	0.2003	9.0647E-05	-0.36227	-0.00016395	-0.16198	-7.3305E-05	452.56515226637106	18.527	1.0431	17.905	17.631	18.674	-0.62141					57	23	4	0	0	0	0.64964	1	391	391		38.714	1.1142	1	840520			14211	5220	9756	9765	16399	16399					0.011046060552416748
HHLPLVIGP	9	Unmodified	_HHLPLVIGP_					0	0	0			REV__ENST00000338316.8_1_5:7414873-7520960:+|nuORF	REV__ENST00000338316.8_1_5:7414873-7520960:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7955322265625	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.7932	1	4730	4730		21.702	2.3424	1	2075300	+		14212	25217	9757	9766	16400	16400					0.08446074267988024
HHLSRRQWQQR	11	Unmodified	_HHLSRRQWQQR_					0	0	0			REV__ENSG00000129667|ENST00000675367|RHBDF2	REV__ENSG00000129667|ENST00000675367|RHBDF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.2770080566406	3	511.274896	1530.80286	0.13027	6.6601E-05	0.25017	0.00012791	0.38044	0.00019451	511.27499558915355	38.116	0.603	38.088	37.774	38.377	-0.027843					31	13	3	0	0	0	0.79224	1	2548	2548		12.957	1.0251	1	130670	+		14213	18829	9758	9767	16401	16401					0.05869005808813199
HHPIIDQSI	9	Unmodified	_HHPIIDQSI_					0	0	0			REV__nc|ENSG00000072041|Q9H2J7-3|SLC6A15	REV__nc|ENSG00000072041|Q9H2J7-3|SLC6A15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2827758789062	2	530.282723	1058.55089	0.39913	0.00021165	-1.7634	-0.00093511	-1.3643	-0.00072346	530.2817370348984	76.587	0.55269	76.538	76.177	76.73	-0.048264					32	18	2	0	0	0	0.55097	1	7592	7592		49.442	11.63	1	143280	+		14214	16634	9759	9768	16402	16402					0.023959746747550525
HHQKIIKVL	9	Unmodified	_HHQKIIKVL_					0	0	0		nc|ENSG00000116580|Q3T8J9-3|GON4L;ENSG00000116580|ENST00000368331|GON4L;ENST00000500626.2_1_1:155587203-155618289:-|nuORF	nc|ENSG00000116580|Q3T8J9-3|GON4L	nc|ENSG00000116580|Q3T8J9-3|GON4L	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	558.3550415039062	2	558.356025	1114.6975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.56	1	114.66	114.16	115.16	0.098114								0	0	0	0.35623	1	12253	12253		12.959	1.4482	1				14215	2927	9760	9769	16403	16403					0.14473696630534505
HHQRPDPRT	9	Unmodified	_HHQRPDPRT_					0	0	0		ENST00000543462.1_1_11:64004599-64005846:+|nuORF;nc|ENSG00000173511|P49765-2|VEGFB	ENST00000543462.1_1_11:64004599-64005846:+|nuORF	ENST00000543462.1_1_11:64004599-64005846:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.2922973632812	2	572.291945	1142.56934	0.53188	0.00030439	-1.8248	-0.0010443	-1.293	-0.00073995	572.2907542659316	17.29	0.32348	16.679	16.52	16.844	-0.6107					14	6	3	0	0	0	0.55097	1	242	242		49.442	8.6634	1	131840			14216	13553	9761	9770	16404	16404					0.0037552936930751457
HHQRPGQNQ	9	Unmodified	_HHQRPGQNQ_					0	0	0		ENSG00000115738|ENST00000396290|ID2;ENST00000462623.1_1_3:62109880-62110168:-|nuORF	ENSG00000115738|ENST00000396290|ID2	ENSG00000115738|ENST00000396290|ID2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.8587036132812	2	551.26847	1100.52239	-0.012693	-6.9975E-06	-0.3949	-0.0002177	-0.4076	-0.0002247	551.2683010324116	19.832	0.41428	19.202	18.983	19.397	-0.6296					11	8	2	0	0	0	0.78058	1	564	564		30.504	2.6214	1	30573			14217	2868	9762	9771	16405	16405					-0.02385330181800782
HHRALWRHPT	10	Unmodified	_HHRALWRHPT_					0	0	0		ENST00000259708.7_1_6:43027633-43027921:+|nuORF;ENST00000460283.1_2_6:43027633-43029102:+|nuORF	ENST00000259708.7_1_6:43027633-43027921:+|nuORF	ENST00000259708.7_1_6:43027633-43027921:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.570068359375	3	437.570762	1309.69046	0.56962	0.00024925	-2.3598	-0.0010326	-1.7902	-0.00078332	437.5696069082171	34.556	0.68977	34.562	34.247	34.937	0.0063934					32	16	3	0	0	0	0.86698	1	2143	2143		28.081	4.7036	1	73691			14218	9380	9763	9772	16406	16406					0.0479977680263346
HHRCRAPG	8	Unmodified	_HHRCRAPG_					0	0	0		ENST00000424946.1_1_12:105322449-105352019:-|nuORF	ENST00000424946.1_1_12:105322449-105352019:-|nuORF	ENST00000424946.1_1_12:105322449-105352019:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2359313964844	2	467.232845	932.451136	-0.9513	-0.00044448	2.1291	0.00099477	1.1778	0.00055029	467.2337078119893	69.729	1.4716	69.765	69.399	70.87	0.035614					135	74	2	0	0	0	0.89457	1	6726	6726		37.028	2.8559	1	2912300			14219	11524	9764	9773	16407	16407					-0.017791214201793082
HHRREDWNNWW	11	Unmodified	_HHRREDWNNWW_					0	0	0		ENST00000580900.5_2_9:21802683-21815463:+|nuORF	ENST00000580900.5_2_9:21802683-21815463:+|nuORF	ENST00000580900.5_2_9:21802683-21815463:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.9176025390625	3	545.915257	1634.72394	-1.6017	-0.00087437	-1.5886	-0.00086722	-3.1902	-0.0017416	546.2485727659065	25.865	0.46053	25.865	25.691	26.151	0					42	20	3	0	0	0	0.7896	1	959	959		13.508	7.1871	1	73372			14220	14101	9765	9774	16408	16408					-0.06803266216093107
HHRRHREQRRY	11	Unmodified	_HHRRHREQRRY_					0	0	0			REV__ENSG00000185955|ENST00000332375|SPACDR	REV__ENSG00000185955|ENST00000332375|SPACDR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2919616699219	4	408.471615	1629.85735	0.015977	6.5261E-06	-3.0549	-0.0012478	-3.0389	-0.0012413	408.47042980057114	19.609	1.6072	18.979	18.801	20.408	-0.6296					57	35	4	0	0	0	0.18372	1	639	639		3.4087	1.99	1	208560	+		14221	22812	9766	9775	16409	16409					0.06762017680262034
HHRRHREQRRY	11	Unmodified	_HHRRHREQRRY_					0	0	0			REV__ENSG00000185955|ENST00000332375|SPACDR	REV__ENSG00000185955|ENST00000332375|SPACDR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.931884765625	3	544.293061	1629.85735	-0.151	-8.2187E-05	-3.1266	-0.0017018	-3.2776	-0.001784	544.2913437858422	19.622	0.9168	18.992	18.756	19.673	-0.6296					49	19	4	0	0	0	0.17996	1	590	590		12.433	3.6335	1	206540	+		14222	22812	9766	9775	16410	16410					0.06762017680262034
HHRSSPHEKH	10	Unmodified	_HHRSSPHEKH_					0	0	0			REV__nc|ENSG00000082258|O60583-2|CCNT2	REV__nc|ENSG00000082258|O60583-2|CCNT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.298095703125	3	417.87451	1250.6017	-1.8312	-0.00076521	0.90244	0.0003771	-0.92876	-0.0003881	417.87550172472737	68.695	0.31562	68.83	68.654	68.97	0.13522					15	12	2	0	0	0	0.37624	1	6163	6163		42.864	25.698	1	36286	+		14223	16836	9767	9776	16411	16411					-0.013576832276839923
HHSARFNA	8	Unmodified	_HHSARFNA_					0	0	0			REV__ENST00000538725.1_1_12:65702311-65709874:+|nuORF	REV__ENST00000538725.1_1_12:65702311-65709874:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.2423400878906	2	470.230825	938.447097	-0.90133	-0.00042383	-0.53804	-0.000253	-1.4394	-0.00067684	470.23048231847235	65.224	0.25747	65.262	65.015	65.272	0.037849					11	8	2	0	0	0	0.4196	1	5753	5753		23.042	15.352	1	111520	+		14224	28440	9768	9777	16412	16412					-0.02458887642251284
HHSKLRGLL	9	Unmodified	_HHSKLRGLL_					0	0	0		ENSG00000136492|ENST00000259008|BRIP1;nc|ENSG00000136492|Q9BX63-2|BRIP1	ENSG00000136492|ENST00000259008|BRIP1	ENSG00000136492|ENST00000259008|BRIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8213500976562	2	530.82235	1059.63015	0.37543	0.00019929	-2.6353	-0.0013989	-2.2599	-0.0011996	530.8207758612427	79.518	0.93618	79.934	79.317	80.253	0.41621					53	21	3	0	0	0	0.58668	1	9106	9106		47.657	3.1263	1	1028200			14225	4115	9769	9778	16413	16413					0.10271666419589565
HHVGSSTT	8	Unmodified	_HHVGSSTT_					0	0	0			REV__ENST00000450804.3_1_11:72281759-72282275:+|nuORF	REV__ENST00000450804.3_1_11:72281759-72282275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1941223144531	2	413.196116	824.37768	-1.822	-0.00075285	-4.2537	-0.0017576	-6.0757	-0.0025105	413.19424312894233	83.437	1.3729	83.602	83.104	84.477	0.1651					59	31	2	0	0	0	0.884	1	8096	8096		33.516	6.7195	1	372750	+		14226	26875	9770	9779	16414	16414					-0.04153391381680649
HHYPNPRG	8	Unmodified	_HHYPNPRG_					0	0	0		ENST00000415654.1_16:22547614-22547698:+|nuORF	ENST00000415654.1_16:22547614-22547698:+|nuORF	ENST00000415654.1_16:22547614-22547698:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.2364196777344	2	489.23865	976.462747	-0.084851	-4.1512E-05	-3.9079	-0.0019119	-3.9928	-0.0019534	489.23659515743003	63.847	1.1575	63.846	63.508	64.665	-0.00078583					92	41	3	0	0	0	0.9159	1	5950	5950		44.531	7.372	1	760060			14227	11382	9771	9780	16415	16415					-0.026426011252056014
HIAMIFGNAII	11	Unmodified	_HIAMIFGNAII_					0	0	0			REV__ENSG00000236398|ENST00000446620|TAS2R39	REV__ENSG00000236398|ENST00000446620|TAS2R39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	600.3353271484375	2	600.333901	1198.65325	0.97496	0.0005853	-1.0493	-0.00062993	-0.074344	-4.4631E-05	600.3333001736194	93.972	2.6072	94.2	93.361	95.968	0.22863					134	62	3	0	0	0	0.67493	1	9578	9578		35.618	2.8678	1	602950	+		14228	23791	9772	9781	16416	16416					0.06186924422013362
HICEKIPG	8	Carbamidomethyl (C)	_HIC(Carbamidomethyl (C))EKIPG_	HIC(1)EKIPG		HIC(58)EKIPG		0	1	0		ENSG00000163481|ENST00000295704|RNF25	ENSG00000163481|ENST00000295704|RNF25	ENSG00000163481|ENST00000295704|RNF25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2467346191406	2	477.247295	952.480036	-0.88369	-0.00042174	-0.86186	-0.00041132	-1.7455	-0.00083306	477.24693641483543	64.828	2.6891	65.382	64.729	67.418	0.55386					152	75	5	0	0	0	0.88944	1	7054	7054		57.811	6.4758	1	2295100			14229	5804	9773	9782	16417	16417	74				0.0018955836560508033
HICHWSLLV	9	Unmodified	_HICHWSLLV_					0	0	0			REV__ENST00000586784.1_1_19:28288975-28289089:+|nuORF	REV__ENST00000586784.1_1_19:28288975-28289089:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.74365234375	2	554.292037	1106.56952	1.8084	0.0010024	-0.014919	-8.2694E-06	1.7935	0.0009941	554.2923691085722	24.585	0.62348	24.071	23.835	24.458	-0.51365					24	13	3	0	0	0	0.20789	1	1181	1181		20.482	0	1	162760	+		14230	29096	9774	9783	16418	16418					0.02049813044959592
HIDRRIARFV	10	Unmodified	_HIDRRIARFV_					0	0	0		ENSG00000162383|ENST00000371494|SLC1A7;ENST00000488036.5_1_1:53556210-53556597:-|nuORF	ENSG00000162383|ENST00000371494|SLC1A7	ENSG00000162383|ENST00000371494|SLC1A7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8823852539062	2	641.878188	1281.74182	2.6248	0.0016848	4.0391	0.0025926	6.6639	0.0042774	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.8608	1	11822	11822		34.173	2.6427	1	4455800			14231	5681	9775	9784	16419	16419					0.1122210077667205
HIEVIEDKQ	9	Unmodified	_HIEVIEDKQ_					0	0	0			REV__nc|ENSG00000131016|Q02952-2|AKAP12	REV__nc|ENSG00000131016|Q02952-2|AKAP12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.790771484375	2	555.793121	1109.57169	0.90582	0.00050345	-1.2022	-0.00066819	-0.29641	-0.00016474	555.792253317415	27.721	0.56341	27.697	27.347	27.911	-0.023558					29	13	3	0	0	0	0.69624	1	1264	1264		40.778	5.1599	1	48485	+		14232	29841	9776	9785	16420	16420					0.021285202637500333
HIFFIAQR	8	Unmodified	_HIFFIAQR_					0	0	0		ENST00000426405.1_1_X:73629614-73629932:+|nuORF	ENST00000426405.1_1_X:73629614-73629932:+|nuORF	ENST00000426405.1_1_X:73629614-73629932:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.8150024414062	2	516.292894	1030.57123	0.1729	8.9268E-05	-1.3654	-0.00070494	-1.1925	-0.00061567	516.2920427016802	19.801	0.45997	19.172	18.937	19.397	-0.6296					12	9	2	0	0	0	0.4196	1	569	569		13.775	0	1	61161			14233	11551	9777	9786	16421	16421					0.057171901252331736
HIFKLPQL	8	Unmodified	_HIFKLPQL_					0	0	0			REV__chr2:189088772-189089872|16|51.81|0.05|9.92|-|2|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|5	REV__chr2:189088772-189089872|16|51.81|0.05|9.92|-|2|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|5	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.30487060546875	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.422	1	53.422	52.922	53.922	0								0	0	0	0.30125	1	4435	4435		20.482	1.1219	1		+		14234	15746	9778	9787	16422	16422					0.0988724492780193
HIFRQETIH	9	Unmodified	_HIFRQETIH_					0	0	0			REV__ENSG00000155897|ENST00000286355|ADCY8	REV__ENSG00000155897|ENST00000286355|ADCY8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8154907226562	2	590.814722	1179.61489	-0.13818	-8.1639E-05	-0.65007	-0.00038407	-0.78825	-0.00046571	590.8145155647071	49.179	1.2352	49.155	48.575	49.811	-0.024033					60	27	4	0	0	0	0.76255	1	4192	4192		35.618	1.4457	1	193980	+		14235	20453	9779	9788	16423	16423					0.03226754831712242
HIFTVTIGPVS	11	Unmodified	_HIFTVTIGPVS_					0	0	0			REV__nc|ENSG00000183918|O60880-5|SH2D1A	REV__nc|ENSG00000183918|O60880-5|SH2D1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	585.8298950195312	2	585.829506	1169.64446	-1.7612	-0.0010318	2.8838	0.0016894	1.1226	0.00065768	585.83107982543	57.473	1.4426	57.507	57.139	58.581	0.033909					83	46	2	0	0	0	0.7342	1	5255	5255		25.574	2.9944	1	158750	+		14236	30090	9780	9789	16424	16424					0.06642274057207942
HIGALFLT	8	Unmodified	_HIGALFLT_					0	0	0			REV__nc|ENSG00000174837|Q14246-4|ADGRE1	REV__nc|ENSG00000174837|Q14246-4|ADGRE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.25482177734375	2	436.255446	870.496338	0.73697	0.00032151	-2.158	-0.00094145	-1.421	-0.00061994	436.25453302910074	111.84	0.49524	111.91	111.59	112.09	0.069542					26	14	2	0	0	0	0.88915	1	12019	12019		35.201	4.6971	1	217290	+		14237	22018	9781	9790	16425	16425					0.055910075939777926
HIGFKKELTY	10	Unmodified	_HIGFKKELTY_					0	0	0			REV__ENST00000470594.5_1_X:51805328-51809606:-|nuORF	REV__ENST00000470594.5_1_X:51805328-51809606:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.3457641601562	2	618.342781	1234.67101	2.5351	0.0015676	2.4621	0.0015224	4.9972	0.00309	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.67571	1	10600	10600		45.972	9.5255	1	980120	+		14238	20393	9782	9791	16426	16426					0.06305962948522392
HIGLRAAEKLN	11	Unmodified	_HIGLRAAEKLN_					0	0	0			REV__ENSG00000111271|ENST00000313698|ACAD10	REV__ENSG00000111271|ENST00000313698|ACAD10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3538818359375	2	611.356754	1220.69895	-1.2523	-0.00076562	0.84173	0.0005146	-0.41059	-0.00025102	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.66929	1	9693	9693		36.447	3.6343	1	16503000	+		14239	17858	9783	9792	16427	16427					0.09743285928607293
HIGLRAAEKLN	11	Unmodified	_HIGLRAAEKLN_					0	0	0			REV__ENSG00000111271|ENST00000313698|ACAD10	REV__ENSG00000111271|ENST00000313698|ACAD10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3547973632812	2	611.356754	1220.69895	1.8406	0.0011253	-2.148	-0.0013132	-0.3074	-0.00018793	611.3554755611618	95.715	4.0888	96.135	95.146	99.235	0.42051					346	99	4	0	0	0	0.65746	2	11386	11386;11434		37.812	2.6595	1	11372000	+		14240	17858	9783	9792	16428;16429	16428					0.09743285928607293
HIGLRAAEKLN	11	Unmodified	_HIGLRAAEKLN_					0	0	0			REV__ENSG00000111271|ENST00000313698|ACAD10	REV__ENSG00000111271|ENST00000313698|ACAD10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.3536376953125	2	611.356754	1220.69895	0.93149	0.00056947	-1.1574	-0.00070761	-0.22595	-0.00013814	611.3560842580883	95.783	3.9941	96.187	95.298	99.293	0.40451					337	97	4	0	0	0	0.70737	1	11420	11420		30.318	5.7985	1	11629000	+		14241	17858	9783	9792	16430	16430					0.09743285928607293
HIGLRLKKDQ	10	Unmodified	_HIGLRLKKDQ_					0	0	0			REV__ENSG00000102543|ENST00000251108|CDADC1	REV__ENSG00000102543|ENST00000251108|CDADC1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3666381835938	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.11	1	118.09	117.59	118.59	-0.024208								0	0	0	0.45132	1	13080	13080		19.104	11.91	1		+		14242	17345	9784	9793	16431	16431					0.12459876308275852
HIGNTLGSM	9	Unmodified	_HIGNTLGSM_					0	0	0		nc|ENSG00000146350|Q96NH3-4|TBC1D32;ENSG00000146350|ENST00000398212|TBC1D32;nc|ENSG00000146350|Q96NH3-5|TBC1D32	nc|ENSG00000146350|Q96NH3-4|TBC1D32	nc|ENSG00000146350|Q96NH3-4|TBC1D32	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.23089599609375	2	465.229102	928.443651	0.36295	0.00016886	-0.40761	-0.00018963	-0.044661	-2.0777E-05	465.22893395401707	22.222	1.0642	21.779	21.413	22.477	-0.44324					43	23	3	0	0	0	0.78058	1	883	883		30.504	2.2494	1	59913			14243	4836	9785	9794	16432	16432					-0.023433185311205307
HIGRKKREL	9	Unmodified	_HIGRKKREL_					0	0	0			REV__chr4:39457705-39458194|14|20.43|0.07|8.09|-|1|None,RPL9|1	REV__chr4:39457705-39458194|14|20.43|0.07|8.09|-|1|None,RPL9|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8543090820312	2	568.854181	1135.69381	-1.3907	-0.00079112	-0.55616	-0.00031637	-1.9469	-0.0011075	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.78058	1	10874	10874		30.504	1.3541	1	72465000	+		14244	15831	9786	9795	16433	16433					0.1313902685665198
HIHILLAN	8	Unmodified	_HIHILLAN_					0	0	0		nc|ENSG00000181109|Q8NH57|OR52P1	nc|ENSG00000181109|Q8NH57|OR52P1	nc|ENSG00000181109|Q8NH57|OR52P1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7771911621094	2	465.779619	929.544686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.191	1	80.328	79.828	80.828	0.13702								0	0	0	0.30252	1	7625	7625		19.36	2.655	1				14245	15132	9787	9796	16434	16434					0.07709501233898663
HIHKSLIGK	9	Unmodified	_HIHKSLIGK_					0	0	0		nc|ENSG00000105968|Q71UI9-4|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENSG00000105968|ENST00000308153|H2AZ2;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-3|H2AZ2	nc|ENSG00000105968|Q71UI9-4|H2AZ2	nc|ENSG00000105968|Q71UI9-4|H2AZ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.8182983398438	2	516.819276	1031.624	1.0349	0.00053487	-1.0643	-0.00055005	-0.029372	-1.518E-05	516.8185404664342	19.472	0.79282	19.002	18.745	19.538	-0.46967					34	16	3	0	0	0	0.3164	3	518	518;529;543		63.534	22.756	1	205450			14246	2268	9788	9797	16435;16436;16437	16435					0.10945148188056919
HIHKSLIGK	9	Unmodified	_HIHKSLIGK_					0	0	0		nc|ENSG00000105968|Q71UI9-4|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENSG00000105968|ENST00000308153|H2AZ2;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-3|H2AZ2	nc|ENSG00000105968|Q71UI9-4|H2AZ2	nc|ENSG00000105968|Q71UI9-4|H2AZ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.81787109375	2	516.819276	1031.624	0.13072	6.756E-05	-0.23786	-0.00012293	-0.10714	-5.5372E-05	516.819028263052	19.635	0.59604	19.006	18.801	19.397	-0.6296					28	12	3	0	0	0	0.73802	2	555	543;555		37.812	11.119	1	276630			14247	2268	9788	9797	16438;16439	16439					0.10945148188056919
HIIVVTLHS	9	Unmodified	_HIIVVTLHS_					0	0	0			REV__nc|ENSG00000196266|Q5JRS4|OR10J3	REV__nc|ENSG00000196266|Q5JRS4|OR10J3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8034362792969	2	509.805834	1017.59712	0.31699	0.0001616	-4.4775	-0.0022826	-4.1605	-0.002121	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.77546	1	10083	10083		31.955	2.1133	1	2635100	+		14248	30127	9789	9798	16440	16440					0.08902039576844345
HIKILLIIIGN	11	Unmodified	_HIKILLIIIGN_					0	0	0			REV__nc|ENSG00000174970|Q8NH19|OR10AG1	REV__nc|ENSG00000174970|Q8NH19|OR10AG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.9201049804688	2	623.915916	1245.81728	2.3391	0.0014594	-1.197	-0.0007468	1.1422	0.00071262	623.9150348689084	109.89	1.4015	109.95	109.45	110.85	0.067932					103	58	2	0	0	0	0.80516	1	13298	13298		10.265	0.5596	1	709500	+		14249	22032	9790	9799	16441	16441					0.2042026518442981
HIKKLQKRAL	10	Unmodified	_HIKKLQKRAL_					0	0	0		nc|ENSG00000225830|P0DP91|ERCC6;ENSG00000225830|ENST00000355832|ERCC6	nc|ENSG00000225830|P0DP91|ERCC6;ENSG00000225830|ENST00000355832|ERCC6	nc|ENSG00000225830|P0DP91|ERCC6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2693786621094	3	412.275063	1233.80336	-0.49338	-0.00020341	-3.972	-0.0016376	-4.4654	-0.001841	412.27337188355926	48.194	1.6757	48.101	47.047	48.723	-0.093178					63	48	2	0	0	0	0.37624	1	3688	3688		11.636	1.9898	1	203780			14250	15263;8710	9791	9800	16442	16442					0.19581032476003202
HIKKVRLIVKG	11	Unmodified	_HIKKVRLIVKG_					0	0	0			REV__chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	REV__chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.9606018066406	3	430.962597	1289.86596	-1.3804	-0.0005949	-3.5971	-0.0015502	-4.9775	-0.0021451	430.960928295924	39.883	1.7352	40.251	38.964	40.699	0.36797					162	41	5	0	0	0	0.8498	1	3357	3357		6.001	0	1	5466100	+		14251	15621	9792	9801	16443	16443					0.23262178544155176
HIKKVRLIVKG	11	Unmodified	_HIKKVRLIVKG_					0	0	0			REV__chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	REV__chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.9596862792969	3	430.962597	1289.86596	-1.1979	-0.00051624	-3.9994	-0.0017236	-5.1973	-0.0022398	430.96070559366615	40.578	1.0757	41.167	40.797	41.872	0.58915					92	30	5	0	0	0	0.81219	1	3495	3495		8.7993	3.3864	1	17366000	+		14252	15621	9792	9801	16444	16444					0.23262178544155176
HILAHLLGG	9	Unmodified	_HILAHLLGG_					0	0	0			REV__ENSG00000230301|ENST00000615035|OR5H6	REV__ENSG00000230301|ENST00000615035|OR5H6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.777099609375	2	465.779619	929.544686	-1.4399	-0.00067067	-2.9942	-0.0013946	-4.4341	-0.0020653	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.7932	1	7615	7615		21.702	0	1	287800	+		14253	23755	9793	9802	16445	16445					0.07709501233921401
HILHLLTP	8	Unmodified	_HILHLLTP_					0	0	0			REV__ENSG00000138823|ENST00000265517|MTTP	REV__ENSG00000138823|ENST00000265517|MTTP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.288330078125	2	472.28982	942.565087	-1.7052	-0.00080534	-2.46	-0.0011618	-4.1652	-0.0019672	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.85277	1	12837	12837		25.45	0.94616	1	3080300	+		14254	19510	9794	9803	16446	16446					0.09150671893701201
HILPLVQNL	9	Unmodified	_HILPLVQNL_					0	0	0			REV__ENSG00000257315|ENST00000550078|ZBED6	REV__ENSG00000257315|ENST00000550078|ZBED6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8209838867188	2	523.821484	1045.62842	2.3131	0.0012117	-3.9064	-0.0020462	-1.5932	-0.00083457	523.8194058340142	104.59	1.4884	104.78	103.64	105.13	0.18888					65	37	2	0	0	0	0.7932	1	12704	12704		26.796	5.8492	1	239400	+		14255	23918	9795	9804	16447	16447					0.1074261261094307
HILRSSNHF	9	Unmodified	_HILRSSNHF_					0	0	0			REV__ENST00000527740.1_1_8:145998653-146003561:-|nuORF	REV__ENST00000527740.1_1_8:145998653-146003561:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.7907104492188	2	555.793789	1109.57303	0.20741	0.00011528	-1.946	-0.0010816	-1.7386	-0.00096628	555.7925914671927	27.455	0.75734	27.416	27.075	27.832	-0.038523					30	17	2	0	0	0	0.58151	1	1312	1312		47.916	1.9434	1	58602	+		14256	23122	9796	9805	16448	16448					0.02262199143183352
HILSIKEFPLL	11	Unmodified	_HILSIKEFPLL_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2677001953125	3	437.267463	1308.78056	-0.59734	-0.0002612	1.3171	0.00057591	0.71972	0.00031471	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.74771	1	4377	4377		22.562	6.5548	1	2564600			14257	7038	9797	9806	16449	16449					0.1385196856786024
HIMALLSP	8	Unmodified	_HIMALLSP_					0	0	0			REV__ENSG00000130876|ENST00000253188|SLC7A10	REV__ENSG00000130876|ENST00000253188|SLC7A10	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.2486572265625	2	441.249306	880.484059	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.013	1	55.013	54.513	55.513	0								0	0	0	0.29199	1	4648	4648		29.842	1.9593	1		+		14258	18917	9798	9807	16450	16450					0.039036478593061474
HIPDHDAPNEQ	11	Unmodified	_HIPDHDAPNEQ_					0	0	0			REV__ENSG00000115548|ENST00000312912|KDM3A	REV__ENSG00000115548|ENST00000312912|KDM3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	636.7840576171875	2	636.783815	1271.55308	1.4408	0.0009175	-1.4567	-0.0009276	-0.015858	-1.0098E-05	636.7827978466215	53.93	0.75775	53.978	53.637	54.394	0.047802					41	22	3	0	0	0	0.7144	1	4442	4442		29.17	0	1	394570	+		14259	18128	9799	9808	16451	16451					-0.07183641378105676
HIPPRPARSV	10	Unmodified	_HIPPRPARSV_					0	0	0		ENST00000529517.1_2_17:21191324-21199075:+|nuORF	ENST00000529517.1_2_17:21191324-21199075:+|nuORF	ENST00000529517.1_2_17:21191324-21199075:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.77783203125	2	565.333082	1128.65161	0.18291	0.0001034	1.0604	0.00059946	1.2433	0.00070286	565.3336541744569	52.767	0.45523	53.19	52.97	53.426	0.42348					12	10	2	0	0	0	0.37624	1	5322	5322		17.468	0	1	147930			14260	13327	9800	9809	16452	16452					0.0924305144826576
HIQSLVKSEKN	11	Unmodified	_HIQSLVKSEKN_					0	0	0		nc|ENSG00000128815|Q6ZS81-5|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-3|WDFY4	nc|ENSG00000128815|Q6ZS81-5|WDFY4;nc|ENSG00000128815|Q6ZS81-3|WDFY4	nc|ENSG00000128815|Q6ZS81-5|WDFY4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.362548828125	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.61369	2	12559	12559;12904		42.864	8.1309	1	27133000			14261	3561;14900	9801	9810	16453;16454	16453					0.07451545000549231
HIRKQITL	8	Unmodified	_HIRKQITL_					0	0	0			REV__nc|ENSG00000168122|Q9NSJ1|ZNF355P	REV__nc|ENSG00000168122|Q9NSJ1|ZNF355P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.8175048828125	2	504.819276	1007.624	1.3418	0.00067735	-4.2381	-0.0021395	-2.8963	-0.0014621	504.8170047325148	99.257	0.71672	99.619	99.369	100.09	0.36136					43	17	3	0	0	0	0.81548	1	12007	12007		20.482	1.1219	1	986030	+		14262	30011	9802	9811	16455	16455					0.12049148188032177
HIRKSSEMFNL	11	Unmodified	_HIRKSSEMFNL_					0	0	0			REV__ENST00000357613.8_1_16:75481385-75481436:-|nuORF	REV__ENST00000357613.8_1_16:75481385-75481436:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.57110595703125	3	454.571328	1360.69215	-0.30019	-0.00013646	1.9427	0.0008831	1.6425	0.00074664	454.5721360794233	29.056	0.42612	29.016	28.785	29.212	-0.039907					34	16	3	0	0	0	0.71803	1	1504	1504		28.577	5.1988	1	33984	+		14263	25418	9803	9812	16456	16456					0.026236049857516264
HIRMERVYYRY	11	Unmodified	_HIRMERVYYRY_					0	0	0			REV__nc|ENSG00000163636|Q15008-3|PSMD6	REV__nc|ENSG00000163636|Q15008-3|PSMD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.2733154296875	3	529.273393	1584.79835	-0.21869	-0.00011575	-0.11899	-6.298E-05	-0.33769	-0.00017873	529.2732380924513	71.384	1.1038	71.345	70.966	72.069	-0.039009					157	45	5	0	0	0	0.7896	1	6932	6932		13.508	5.1007	1	1427100	+		14264	20950	9804	9813	16457	16457					0.029343605510803172
HIRPLVKY	8	Unmodified	_HIRPLVKY_					0	0	0			REV__ENSG00000138095|ENST00000260665|LRPPRC	REV__ENSG00000138095|ENST00000260665|LRPPRC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3170776367188	2	513.316369	1024.61818	-0.55499	-0.00028488	1.2491	0.00064117	0.69408	0.00035628	513.3170547866824	46.667	1.0511	46.638	46.182	47.233	-0.028782					48	25	3	0	0	0	0.86791	1	3844	3844		28.254	0	1	170530	+		14265	19440	9805	9814	16458	16458					0.10686049676382936
HIRQHAIFHS	10	Unmodified	_HIRQHAIFHS_					0	0	0			REV__nc|ENSG00000121903|P17040-3|ZSCAN20	REV__nc|ENSG00000121903|P17040-3|ZSCAN20	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3455810546875	2	623.333613	1244.65267	0.78233	0.00048765	0.17742	0.00011059	0.95975	0.00059824	623.3330916618283	95.795	0.67483	95.842	95.29	95.965	0.046989					22	15	2	0	0	0	0.37624	1	10154	10154		19.104	0	1	43197	+		14266	18471	9806	9815	16459	16459					0.04013265817161482
HIRQHQTLN	9	Unmodified	_HIRQHQTLN_					0	0	0			REV__ENSG00000196653|ENST00000436624|ZNF502;REV__ENSG00000196263|ENST00000308031|ZNF471;REV__ENSG00000141040|ENST00000395825|ZNF287;REV__nc|ENSG00000189180|Q06730|ZNF33A	REV__ENSG00000196653|ENST00000436624|ZNF502	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.8104858398438	2	573.809971	1145.60539	0.50161	0.00028783	-1.5477	-0.00088809	-1.0461	-0.00060026	573.808958076325	51.177	0.45063	51.212	50.998	51.448	0.034588					20	11	2	0	0	0	0.41566	1	4061	4061		56.721	5.5284	1	141390	+		14267	23157;23108;19660;23069	9807	9816	16460	16460					0.038409865461972004
HIRQHQTLN	9	Unmodified	_HIRQHQTLN_					0	0	0			REV__ENSG00000196653|ENST00000436624|ZNF502;REV__ENSG00000196263|ENST00000308031|ZNF471;REV__ENSG00000141040|ENST00000395825|ZNF287;REV__nc|ENSG00000189180|Q06730|ZNF33A	REV__ENSG00000196653|ENST00000436624|ZNF502	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	573.809971	1145.60539	-0.94889	-0.00054448	1.3988	0.00080263	0.44989	0.00025815	573.8103915117835	51.085	0.24545	51.082	50.93	51.176	-0.0020447	-0.11389	0.0028541	NaN	56.721	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33798	+		14268	23157;23108;19660;23069	9807	9816							0.038409865461972004
HIRQHQTLN	9	Unmodified	_HIRQHQTLN_					0	0	0			REV__ENSG00000196653|ENST00000436624|ZNF502;REV__ENSG00000196263|ENST00000308031|ZNF471;REV__ENSG00000141040|ENST00000395825|ZNF287;REV__nc|ENSG00000189180|Q06730|ZNF33A	REV__ENSG00000196653|ENST00000436624|ZNF502	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	573.809971	1145.60539	0.42789	0.00024553	-1.0446	-0.00059939	-0.61669	-0.00035386	573.8092087365964	51.245	0.43889	51.295	51.054	51.493	0.049896	0.09876	5.0033E-05	NaN	56.721	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130070	+		14269	23157;23108;19660;23069	9807	9816							0.038409865461972004
HIRQVLVKAE	10	Unmodified	_HIRQVLVKAE_					0	0	0		nc|ENSG00000134278|Q08AE8-4|SPIRE1;nc|ENSG00000134278|Q08AE8-3|SPIRE1;nc|ENSG00000134278|Q08AE8-5|SPIRE1;nc|ENSG00000134278|Q08AE8-2|SPIRE1;ENSG00000134278|ENST00000409402|SPIRE1	nc|ENSG00000134278|Q08AE8-4|SPIRE1	nc|ENSG00000134278|Q08AE8-4|SPIRE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3621215820312	2	596.861672	1191.70879	0.16447	9.8169E-05	-0.4415	-0.00026352	-0.27703	-0.00016535	596.8608292469233	75.436	0.99821	75.831	75.447	76.445	0.39507					37	23	2	0	0	0	0.86718	1	8532	8532		27.882	1.1893	1	263790			14270	3923	9808	9817	16461	16461					0.12060473933979665
HISKLGEAYLR	11	Unmodified	_HISKLGEAYLR_					0	0	0			REV__ENST00000528147.1_1_17:45258889-45266538:-|nuORF	REV__ENST00000528147.1_1_17:45258889-45266538:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.8646240234375	2	643.864412	1285.71427	2.0647	0.0013294	-1.8547	-0.0011942	0.21004	0.00013523	644.364457267977	114.36	1.8732	114.37	113.93	115.8	0.0094528					114	91	2	0	0	0	0.17062	1	13905	13905		54.722	37.357	1	101030	+		14271	28243	9809	9818	16462	16462					0.0828415272580969
HISPRASPRI	10	Unmodified	_HISPRASPRI_					0	0	0			REV__ENST00000486253.1_1_15:91479504-91483847:+|nuORF	REV__ENST00000486253.1_1_15:91479504-91483847:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3314819335938	2	567.330539	1132.64652	1.492	0.00084643	-2.5283	-0.0014344	-1.0363	-0.00058793	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.93979	1	9458	9458		3.1592	1.5402	1	5346500	+		14272	27544	9810	9819	16463	16463					0.0855074758567298
HISRLQPRV	9	Unmodified	_HISRLQPRV_					0	0	0		nc|ENSG00000085552|Q9P2J2-2|IGSF9;ENSG00000085552|ENST00000368094|IGSF9;ENST00000476102.1_1_1:159900586-159913268:-|nuORF	nc|ENSG00000085552|Q9P2J2-2|IGSF9	nc|ENSG00000085552|Q9P2J2-2|IGSF9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3323364257812	2	553.333082	1104.65161	-1.4413	-0.00079751	0.24372	0.00013486	-1.1976	-0.00066265	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.78058	1	10031	10031		30.504	2.4222	1	2490200			14273	1533	9811	9820	16464	16464					0.10347051448297861
HITLIPKLTT	10	Unmodified	_HITLIPKLTT_					0	0	0		L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|32|1|sense	L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|32|1|sense	L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|32|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8541259765625	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.8651	1	11092	11092		25.574	2.5316	1	50786000			14274	14650	9812	9821	16465	16465					0.13407437470914374
HITLIPKLTT	10	Unmodified	_HITLIPKLTT_					0	0	0		L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|32|1|sense	L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|32|1|sense	L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|32|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8547973632812	2	568.855524	1135.69649	-1.3907	-0.00079112	-2.9165	-0.001659	-4.3072	-0.0024502	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.77314	1	10898	10898		40.778	12.896	1	72465000			14275	14650	9812	9821	16466	16466					0.13407437470914374
HITVSHKN	8	Unmodified	_HITVSHKN_					0	0	0			REV__nc|ENSG00000198466|Q96SQ5-2|ZNF587	REV__nc|ENSG00000198466|Q96SQ5-2|ZNF587	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.25543212890625	2	468.256508	934.498464	-0.11516	-5.3922E-05	-3.5335	-0.0016546	-3.6487	-0.0017085	468.25473552954975	82.299	3.2758	82.365	81.1	84.376	0.06591					140	75	2	0	0	0	0.90465	1	8032	8032		40.573	1.5511	1	190410	+		14276	23330	9813	9822	16467	16467					0.0285943633180068
HIVLKLVPI	9	Unmodified	_HIVLKLVPI_					0	0	0		ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3137817382812	2	516.35242	1030.69029	0.87652	0.00045259	-3.249	-0.0016776	-2.3725	-0.001225	516.3498843455483	99.156	0.95445	99.204	98.765	99.72	0.047523					38	22	3	0	0	0	0.20789	1	10624	10624		12.959	0	1	174070			14277	7166	9814	9823	16468	16468					0.17616964030071358
HIWTCNKF	8	Carbamidomethyl (C)	_HIWTC(Carbamidomethyl (C))NKF_	HIWTC(1)NKF		HIWTC(50)NKF		0	1	0		ENSG00000197594|ENST00000647893|ENPP1	ENSG00000197594|ENST00000647893|ENPP1	ENSG00000197594|ENST00000647893|ENPP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.267578125	2	553.266019	1104.51748	1.2081	0.00066841	0.92179	0.00050999	2.1299	0.0011784	553.2664407173346	27.614	0.90796	27.359	26.989	27.897	-0.25465					43	20	3	0	0	0	0.92973	1	1634	1634		50.025	7.5501	1	485040			14278	8179	9815	9824	16469	16469	100				-0.030593503687896373
HIYCFYVY	8	Unmodified	_HIYCFYVY_					0	0	0		ENSG00000007541|ENST00000321878|PIGQ;nc|ENSG00000007541|Q9BRB3|PIGQ	ENSG00000007541|ENST00000321878|PIGQ	ENSG00000007541|ENST00000321878|PIGQ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.2925415039062	2	554.252046	1106.48954	-0.22241	-0.00012327	-1.8662	-0.0010343	-2.0886	-0.0011576	554.7520993027885	75.521	0.33475	75.916	75.742	76.077	0.39507					9	7	2	0	0	0	0.4196	1	8533	8533		16.705	0	1	82946			14279	728	9816	9825	16470	16470					-0.05944673348881224
HIYMCGAPT	9	Unmodified	_HIYMCGAPT_					0	0	0			REV__nc|ENSG00000128607|Q6PID8-2|KLHDC10	REV__nc|ENSG00000128607|Q6PID8-2|KLHDC10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	496.2374572753906	2	496.720055	991.425558	-1.1243	-0.00055848	3.8344	0.0019046	2.7101	0.0013461	496.7218344834385	30.915	0.54133	30.904	30.551	31.093	-0.010656					21	13	2	0	0	0	0.20789	1	1670	1670		42.474	24.15	1	27030	+		14280	18784	9817	9826	16471	16471					-0.07049776777489569
HKAEAAGR	8	Unmodified	_HKAEAAGR_					0	0	0			REV__ENSG00000188112|ENST00000341865|C6orf132	REV__ENSG00000188112|ENST00000341865|C6orf132	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.226318359375	2	420.227751	838.440949	-1.3512	-0.00056782	1.4844	0.0006238	0.13321	5.5978E-05	420.2282629742312	76.938	2.2039	76.938	74.958	77.162	0					134	85	2	0	0	0	0.87922	1	7004	7004		31.955	3.7006	1	154140	+		14281	22979	9818	9827	16472	16472					0.015265941262214255
HKATIKDL	8	Unmodified	_HKATIKDL_					0	0	0			REV__ENST00000471490.1_1_21:45542017-45544896:+|nuORF	REV__ENST00000471490.1_1_21:45542017-45544896:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.24176025390625	2	463.276909	924.539266	0.25473	0.00011801	-0.70502	-0.00032662	-0.4503	-0.00020861	463.27670436679887	19.912	0.42039	19.442	19.256	19.676	-0.46967					18	8	3	0	0	0	0.4196	1	601	601		16.473	0	1	32692	+		14282	27233	9819	9828	16473	16473					0.07397777651419801
HKATLLEQR	9	Unmodified	_HKATLLEQR_					0	0	0		ENST00000432518.6_2_3:28798427-28798894:+|nuORF	ENST00000432518.6_2_3:28798427-28798894:+|nuORF	ENST00000432518.6_2_3:28798427-28798894:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3194580078125	2	548.317097	1094.61964	1.2688	0.0006957	1.3122	0.00071949	2.581	0.0014152	548.3179583134634	109.51	0.28491	109.54	109.43	109.71	0.033089					27	14	2	0	0	0	0.7932	1	12014	12014		26.693	1.1189	1	844490			14283	11668	9820	9829	16474	16474					0.07611638974458401
HKDKGGKN	8	Unmodified	_HKDKGGKN_					0	0	0			REV__ENST00000320560.12_1_12:45725150-45740856:+|nuORF	REV__ENST00000320560.12_1_12:45725150-45740856:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2406005859375	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.87922	1	7751	7751		31.955	1.6371	1	968500	+		14284	25000	9821	9830	16475	16475					0.021228632977113193
HKEERAQAKMQ	11	Unmodified	_HKEERAQAKMQ_					0	0	0			REV__nc|ENSG00000137710|P35241-4|RDX	REV__nc|ENSG00000137710|P35241-4|RDX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.5655212402344	3	452.566465	1354.67757	-1.3471	-0.00060964	-1.1236	-0.0005085	-2.4707	-0.0011181	452.5658003249651	17.807	0.44631	17.851	17.659	18.105	0.044048					52	22	4	0	0	0	0.61907	1	274	274		42.243	5.9249	1	420650	+		14285	17038	9822	9831	16476	16476					0.014415328375662284
HKERPDELKA	10	Unmodified	_HKERPDELKA_					0	0	0			REV__ENSG00000196664|ENST00000380659|TLR7	REV__ENSG00000196664|ENST00000380659|TLR7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.355224609375	2	611.830569	1221.64658	0.86307	0.00052805	0.29576	0.00018095	1.1588	0.00070901	612.3330118669363	95.328	0.20203	95.491	95.392	95.594	0.16316					6	4	2	0	0	0	0.37624	1	9775	9775		21.686	3.4237	1	88203	+		14286	23159	9823	9832	16477	16477					0.044627027949900366
HKFLFTLLLT	10	Unmodified	_HKFLFTLLLT_					0	0	0		ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.5840759277344	3	411.584903	1231.73288	1.0715	0.00044102	-2.7033	-0.0011126	-1.6318	-0.00067161	411.58372332792885	25.568	2.1598	25.311	24.774	26.934	-0.25721					112	48	3	0	0	0	0.86802	1	1326	1326		27.047	0.3544	1	1250200			14287	921	9824	9833	16478	16478					0.12628314367657367
HKFLIGKG	8	Unmodified	_HKFLIGKG_					0	0	0		nc|ENSG00000115677|Q00341-2|HDLBP;ENSG00000115677|ENST00000310931|HDLBP;ENST00000479169.5_1_2:242177863-242181895:-|nuORF;ENST00000487169.5_1_2:242174673-242189369:-|nuORF	nc|ENSG00000115677|Q00341-2|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.27459716796875	2	450.276712	898.538872	-0.39172	-0.00017638	-4.3859	-0.0019749	-4.7777	-0.0021513	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.884	1	11298	11298		33.516	1.5607	1	19085000			14288	2866	9825	9834	16479	16479					0.08554402722234045
HKFLTIPR	8	Unmodified	_HKFLTIPR_					0	0	0		ENSG00000092439|ENST00000646667|TRPM7	ENSG00000092439|ENST00000646667|TRPM7	ENSG00000092439|ENST00000646667|TRPM7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3108215332031	2	506.308544	1010.60253	-0.50534	-0.00025586	1.1899	0.00060246	0.68456	0.0003466	506.3090354627433	46.385	1.2359	46.4	45.86	47.095	0.015514					46	34	2	0	0	0	0.87922	1	3378	3378		31.955	3.7006	1	163970			14289	1699	9826	9835	16480	16480					0.0976576315931652
HKFYMQIF	8	Unmodified	_HKFYMQIF_					0	0	0		ENSG00000115020|ENST00000264380|PIKFYVE	ENSG00000115020|ENST00000264380|PIKFYVE	ENSG00000115020|ENST00000264380|PIKFYVE	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.2801513671875	2	557.281137	1112.54772	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.02	1	68.051	67.551	68.551	0.030571								0	0	0	0.29452	1	6478	6478		33.516	3.0119	1				14290	2807	9827	9836	16481	16481					-0.004049917036127226
HKIIQALPT	9	Unmodified	_HKIIQALPT_					0	0	0		ENST00000334529.9_1_3:112218294-112218402:-|nuORF	ENST00000334529.9_1_3:112218294-112218402:-|nuORF	ENST00000334529.9_1_3:112218294-112218402:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8130187988281	2	510.813659	1019.61277	0.94502	0.00048273	-1.9702	-0.0010064	-1.0251	-0.00052365	510.8124794559805	88.963	0.86092	89.413	88.915	89.776	0.45058					43	20	3	0	0	0	0.7932	1	10491	10491		24.203	1.1603	1	941880			14291	10149	9828	9837	16482	16482					0.10374326093892705
HKIKLFGT	8	Unmodified	_HKIKLFGT_					0	0	0			REV__ENSG00000027644|ENST00000368195|INSRR	REV__ENSG00000027644|ENST00000368195|INSRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28814697265625	2	472.28982	942.565087	-1.7052	-0.00080534	-2.46	-0.0011618	-4.1652	-0.0019672	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.80706	1	12419	12419		19.36	1.0356	1	3080300	+		14292	16264	9829	9838	16483	16483					0.09150671893701201
HKITKLTYTK	10	Unmodified	_HKITKLTYTK_					0	0	0			REV__chr22:45740538-45798612|23|24.17|0.31|6.3|+|0|TE_info:L1ME1,L1ME1_dup30767,L1,LINE,acceptor,+,45798612,45799075|ATXN10,None|11	REV__chr22:45740538-45798612|23|24.17|0.31|6.3|+|0|TE_info:L1ME1,L1ME1_dup30767,L1,LINE,acceptor,+,45798612,45799075|ATXN10,None|11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.5842590332031	3	411.583562	1231.72886	2.5249	0.0010392	-1.0548	-0.00043412	1.4701	0.00060507	411.5831450688618	25.588	2.9561	25.157	24.499	27.455	-0.4311					162	67	5	0	0	0	0.81117	2	1333	1333;1370		38.754	4.7576	1	1542200	+		14293	15789	9830	9839	16484;16485	16484					0.1222622487391618
HKITKSSLLKP	11	Unmodified	_HKITKSSLLKP_					0	0	0		nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7;ENSG00000083223|ENST00000375963|TUT7	nc|ENSG00000083223|Q5VYS8-4|TUT7	nc|ENSG00000083223|Q5VYS8-4|TUT7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.4004516601562	2	626.392805	1250.77106	2.9103	0.001823	0.82711	0.0005181	3.7374	0.0023411	626.8945870122382	108.33	0.15922	108.3	108.19	108.35	-0.031487					6	4	2	0	0	0	0.69995	1	12021	12021		31.53	8.0071	1	724140			14294	1499	9831	9840	16486	16486					0.15570200282309088
HKKIKQHCR	9	Unmodified	_HKKIKQHCR_					0	0	0		nc|ENSG00000066827|Q9P243-4|ZFAT;nc|ENSG00000066827|Q9P243-2|ZFAT;ENSG00000066827|ENST00000377838|ZFAT;chr8:134565152-134565333|13|11.31|0.51|4.48|-|ENST00000523243|ZFAT,ZFAT;nc|ENSG00000066827|Q9P243-3|ZFAT	nc|ENSG00000066827|Q9P243-4|ZFAT;nc|ENSG00000066827|Q9P243-3|ZFAT	nc|ENSG00000066827|Q9P243-4|ZFAT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3431396484375	2	589.340384	1176.66621	0.82336	0.00048524	3.5314	0.0020812	4.3548	0.0025665	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.78058	1	11248	11248		30.504	3.8107	1	9460500			14295	1168;14767	9832	9841	16487	16487					0.0849480032475185
HKKKHVIFAS	10	Unmodified	_HKKKHVIFAS_					0	0	0			REV__ENSG00000185219|ENST00000396077|ZNF445	REV__ENSG00000185219|ENST00000396077|ZNF445	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.856689453125	2	597.858932	1193.70331	-0.32365	-0.0001935	-3.1514	-0.0018841	-3.4751	-0.0020776	598.3588954923197	94.611	4.9065	94.611	93.622	98.528	0					293	115	3	0	0	0	0.8651	1	9324	9324		25.574	2.0514	1	5706300	+		14296	22746	9833	9842	16488	16488					0.11420795142180395
HKKLRRER	8	Unmodified	_HKKLRRER_					0	0	0			REV__chr1:200615609-200617612|58|29.19|0.43|6.1|-|2|KIF14,KIF14|2	REV__chr1:200615609-200617612|58|29.19|0.43|6.1|-|2|KIF14,KIF14|2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.852783203125	2	561.851973	1121.68939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.62	1	116.55	116.05	117.05	-0.074318								0	0	0	0.30579	1	12525	12525		16.473	4.9621	1		+		14297	15436	9834	9843	16489	16489					0.13341562433743093
HKKWPKGAGNE	11	Unmodified	_HKKWPKGAGNE_					0	0	0			REV__ENSG00000041802|ENST00000265245|LSG1	REV__ENSG00000041802|ENST00000265245|LSG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3336791992188	2	626.333279	1250.652	0.1526	9.5579E-05	-0.71301	-0.00044658	-0.56041	-0.000351	626.3326782105968	42.989	0.76316	42.96	42.637	43.4	-0.029461					40	17	3	0	0	0	0.31611	1	3262	3262		63.534	28.382	1	443750	+		14298	16322	9835	9844	16490	16490					0.036704263774709034
HKKWPKGAGNE	11	Unmodified	_HKKWPKGAGNE_					0	0	0			REV__ENSG00000041802|ENST00000265245|LSG1	REV__ENSG00000041802|ENST00000265245|LSG1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	626.333279	1250.652	-0.93343	-0.00058464	0.55119	0.00034523	-0.38224	-0.00023941	626.3340479238238	42.727	0.22876	42.727	42.605	42.834	0	-0.17719	0.00087557	NaN	63.534	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48177	+		14299	16322	9835	9844							0.036704263774709034
HKKWPKGAGNE	11	Unmodified	_HKKWPKGAGNE_					0	0	0			REV__ENSG00000041802|ENST00000265245|LSG1	REV__ENSG00000041802|ENST00000265245|LSG1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	626.333279	1250.652	-0.6713	-0.00042046	-0.060856	-3.8116E-05	-0.73215	-0.00045857	626.3330596948049	43.058	0.73404	43.058	42.724	43.458	0.00016785	0.15367	0.00010888	NaN	63.534	42	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	337190	+		14300	16322	9835	9844							0.036704263774709034
HKKWPKGAGNE	11	Unmodified	_HKKWPKGAGNE_					0	0	0			REV__ENSG00000041802|ENST00000265245|LSG1	REV__ENSG00000041802|ENST00000265245|LSG1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	626.333279	1250.652	-1.3586	-0.00085095	-0.32088	-0.00020098	-1.6795	-0.0010519	626.3325063666595	42.357	0.44206	42.79	42.646	43.088	0.4334	-0.11406	-0.00021685	NaN	63.534	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	180620	+		14301	16322	9835	9844							0.036704263774709034
HKKWPKGAGNE	11	Unmodified	_HKKWPKGAGNE_					0	0	0			REV__ENSG00000041802|ENST00000265245|LSG1	REV__ENSG00000041802|ENST00000265245|LSG1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	626.333279	1250.652	-0.89518	-0.00056068	-0.1377	-8.6243E-05	-1.0329	-0.00064692	626.3331322000464	42.171	0.39981	42.869	42.571	42.97	0.69754	-0.035969	1.2625E-05	NaN	63.534	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	163420	+		14302	16322	9835	9844							0.036704263774709034
HKKYSKPVLV	10	Unmodified	_HKKYSKPVLV_					0	0	0		nc|ENSG00000204711|Q5VTT2-2|CFAP95;ENSG00000204711|ENST00000377197|CFAP95	nc|ENSG00000204711|Q5VTT2-2|CFAP95	nc|ENSG00000204711|Q5VTT2-2|CFAP95	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.1970520019531	3	400.248403	1197.72338	0.95998	0.00038423	0.58669	0.00023482	1.5467	0.00061905	400.248152857438	86.922	0.21528	86.848	86.731	86.946	-0.074005					6	4	2	0	0	0	0.37624	1	8972	8972		33.922	13.084	1	30876			14303	8483	9836	9845	16491	16491					0.13242546082119588
HKLAEFTLLVD	11	Unmodified	_HKLAEFTLLVD_					0	0	0			REV__ENSG00000145041|ENST00000684031|DCAF1	REV__ENSG00000145041|ENST00000684031|DCAF1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.3645629882812	2	643.36117	1284.70779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.07	1	116.06	115.56	116.56	-0.0021133								0	0	0	0.56276	1	13946	13946		18.262	0	1		+		14304	19924	9837	9846	16492	16492					0.07682214774422391
HKLAFLVGQ	9	Unmodified	_HKLAFLVGQ_					0	0	0		ENSG00000125207|ENST00000245255|PIWIL1;nc|ENSG00000125207|Q96J94-3|PIWIL1	ENSG00000125207|ENST00000245255|PIWIL1	ENSG00000125207|ENST00000245255|PIWIL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7991638183594	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.687	1	42.687	42.187	43.187	0								0	0	0	0.31828	1	2977	2977		24.203	0	1				14305	3376	9838	9847	16493	16493					0.0812205692243424
HKLAPPGP	8	Unmodified	_HKLAPPGP_					0	0	0			REV__ENSG00000170604|ENST00000302165|IRF2BP1	REV__ENSG00000170604|ENST00000302165|IRF2BP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.73919677734375	2	408.739963	815.465373	-1.9297	-0.00078873	1.2966	0.00052999	-0.63302	-0.00025874	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.80706	1	2206	2206		19.36	3.7238	1	521170	+		14306	21672	9839	9848	16494	16494					0.05025854279756459
HKLAPPGP	8	Unmodified	_HKLAPPGP_					0	0	0			REV__ENSG00000170604|ENST00000302165|IRF2BP1	REV__ENSG00000170604|ENST00000302165|IRF2BP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.73968505859375	2	408.739963	815.465373	-1.0833	-0.00044277	0.59228	0.00024209	-0.49098	-0.00020068	408.74010288341543	37.409	2.2746	37.356	36.961	39.236	-0.053558					112	51	3	0	0	0	0.81548	2	2599	2574;2599		37.028	7.1869	1	289290	+		14307	21672	9839	9848	16495;16496	16496					0.05025854279756459
HKLAPPGP	8	Unmodified	_HKLAPPGP_					0	0	0			REV__ENSG00000170604|ENST00000302165|IRF2BP1	REV__ENSG00000170604|ENST00000302165|IRF2BP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.7397766113281	2	408.739963	815.465373	0.85094	0.00034781	-1.5858	-0.00064816	-0.73482	-0.00030035	408.7393373651895	37.561	2.1469	37.572	37.24	39.387	0.011173					113	49	4	0	0	0	0.86288	1	2587	2587		26.796	3.7594	1	272800	+		14308	21672	9839	9848	16497	16497					0.05025854279756459
HKLAPPGP	8	Unmodified	_HKLAPPGP_					0	0	0			REV__ENSG00000170604|ENST00000302165|IRF2BP1	REV__ENSG00000170604|ENST00000302165|IRF2BP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.7395935058594	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.92176	1	1896	1896		46.766	9.738	1	1364200	+		14309	21672	9839	9848	16498	16498					0.05025854279756459
HKLAPPGP	8	Unmodified	_HKLAPPGP_					0	0	0			REV__ENSG00000170604|ENST00000302165|IRF2BP1	REV__ENSG00000170604|ENST00000302165|IRF2BP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.73944091796875	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.86288	3	1990	1840;1888;1990		37.028	3.5129	1	1448600	+		14310	21672	9839	9848	16499;16500;16501	16501					0.05025854279756459
HKLCKLIYPRI	11	Unmodified	_HKLCKLIYPRI_					0	0	0			REV__ENST00000503391.5_1_4:84182841-84188909:-|nuORF	REV__ENST00000503391.5_1_4:84182841-84188909:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.94830322265625	3	461.947959	1382.82205	0.76575	0.00035374	-0.3044	-0.00014062	0.46135	0.00021312	461.94782502952427	107.84	0.75671	107.93	107.26	108.01	0.084404					86	18	6	0	0	0	0.74022	1	11598	11598		24.232	4.9691	1	101570000	+		14311	27845	9840	9849	16502	16502					0.1459482605548601
HKLCTFILKNP	11	Unmodified	_HKLCTFILKNP_					0	0	0		ENST00000559923.1_1_14:103803111-103803587:+|nuORF;ENSG00000100664|ENST00000216554|EIF5	ENST00000559923.1_1_14:103803111-103803587:+|nuORF	ENST00000559923.1_1_14:103803111-103803587:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.5858459472656	3	438.584797	1312.73256	-0.85727	-0.00037599	1.3111	0.00057502	0.45381	0.00019903	438.58603368368296	31.551	0.945	31.631	31.297	32.242	0.079834					66	21	4	0	0	0	0.69071	1	2138	2138		33.039	1.0053	1	2788200			14312	1859	9841	9850	16503	16503					0.08870571376155567
HKLFAPVR	8	Unmodified	_HKLFAPVR_					0	0	0		ENSG00000124098|ENST00000371384|FAM210B;ENST00000445714.1_1_10:27638689-27639127:-|nuORF	ENSG00000124098|ENST00000371384|FAM210B	ENSG00000124098|ENST00000371384|FAM210B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.3000793457031	2	484.295436	966.57632	0.247	0.00011962	-1.1498	-0.00055686	-0.90283	-0.00043723	484.29474228759796	32.685	0.59727	32.812	32.546	33.144	0.12643					24	13	2	0	0	0	0.4196	1	2279	2279		31.955	0	1	210630			14313	3303	9842	9851	16504	16504					0.09169493987837996
HKLGVRNPHR	10	Unmodified	_HKLGVRNPHR_					0	0	0		ENST00000437781.1_22:16151617-16151692:-|nuORF	ENST00000437781.1_22:16151617-16151692:-|nuORF	ENST00000437781.1_22:16151617-16151692:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.2389221191406	3	405.239012	1212.69521	-0.9621	-0.00038988	4.0667	0.001648	3.1046	0.0012581	405.24065528947847	103.14	0.51096	103.14	102.87	103.38	0					23	12	2	0	0	0	0.86698	1	10553	10553		28.081	3.8497	1	2123200			14314	11741	9843	9852	16505	16505					0.09736660945418407
HKLKEKEREL	10	Unmodified	_HKLKEKEREL_					0	0	0		ENSG00000135338|ENST00000369846|LCA5	ENSG00000135338|ENST00000369846|LCA5	ENSG00000135338|ENST00000369846|LCA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2564392089844	3	437.257738	1308.75138	-1.8163	-0.00079418	0.93317	0.00040803	-0.8831	-0.00038614	437.2580894693445	99.183	2.5872	99.369	98.322	100.91	0.18581					159	59	3	0	0	0	0.86409	1	10199	10199		25.126	3.3456	1	447430			14315	4008	9844	9853	16506	16506					0.10935824271564343
HKLLPVGQTVF	11	Unmodified	_HKLLPVGQTVF_					0	0	0		CON__Q2UVX4	CON__Q2UVX4	CON__Q2UVX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8689575195312	2	619.866423	1237.71829	2.0624	0.0012784	2.5108	0.0015564	4.5732	0.0028348	619.8678492982955	94.196	2.767	94.137	92.294	95.061	-0.059212					208	65	4	0	0	0	0.67778	1	9950	9950		35.152	5.982	1	2061200		+	14316	616	9845	9854	16507	16507					0.10894242219501393
HKLLVDSTLLL	11	Unmodified	_HKLLVDSTLLL_					0	0	0			REV__ENSG00000047634|ENST00000380041|SCML1	REV__ENSG00000047634|ENST00000380041|SCML1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3871459960938	2	626.387188	1250.75982	-1.2033	-0.00075372	0.43985	0.00027552	-0.76344	-0.00047821	626.3871390536368	109.94	1.1883	109.95	109.68	110.87	0.0060501					79	40	3	0	0	0	0.75495	1	11724	11724		20.947	0.95016	1	879220	+		14317	16356	9846	9855	16508	16508					0.14447378188197035
HKLQVKPRN	9	Unmodified	_HKLQVKPRN_					0	0	0		ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3408203125	2	560.340907	1118.66726	-0.40072	-0.00022454	-0.22116	-0.00012393	-0.62189	-0.00034847	560.340696960339	107.82	1.1221	107.82	106.75	107.87	0					48	26	2	0	0	0	0.74721	1	11140	11140		37.159	4.3467	1	6321700			14318	8109	9847	9856	16509	16509					0.11267337965318802
HKLQVKPRN	9	Unmodified	_HKLQVKPRN_					0	0	0		ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	560.340907	1118.66726	-1.1224	-0.00062892	-1.2615	-0.00070685	-2.3839	-0.0013358	560.340026535136	107.89	0.31844	107.85	107.61	107.93	-0.042404	-0.050729	0.00027486	NaN	37.159	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5123000			14319	8109	9847	9856							0.11267337965318802
HKLQVKPRN	9	Unmodified	_HKLQVKPRN_					0	0	0		ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	560.340907	1118.66726	3.1446	0.001762	-4.756	-0.002665	-1.6114	-0.00090293	560.3381335207287	107.89	0.36398	107.86	107.55	107.92	-0.031487	-0.035448	-0.0036414	NaN	37.159	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4827100			14320	8109	9847	9856							0.11267337965318802
HKLQVKPRN	9	Unmodified	_HKLQVKPRN_					0	0	0		ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	560.340907	1118.66726	1.3844	0.00077574	-2.9507	-0.0016534	-1.5663	-0.00087768	560.3390527998575	107.88	0.41002	107.92	107.56	107.97	0.035622	0.017675	-0.0016183	NaN	37.159	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4291800			14321	8109	9847	9856							0.11267337965318802
HKLQVKPRN	9	Unmodified	_HKLQVKPRN_					0	0	0		ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	560.340907	1118.66726	0.39491	0.00022128	-2.1648	-0.001213	-1.7699	-0.00099172	560.3395350640901	107.84	0.67088	107.98	107.4	108.07	0.13866	0.077144	-0.00073745	NaN	37.159	43	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8772900			14322	8109	9847	9856							0.11267337965318802
HKLQVKPRN	9	Unmodified	_HKLQVKPRN_					0	0	0		ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	560.340907	1118.66726	0.86134	0.00048264	-2.2547	-0.0012634	-1.3933	-0.00078073	560.3394852892126	107.88	0.51566	107.96	107.5	108.01	0.084412	0.061322	-0.00083819	NaN	37.159	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7936400			14323	8109	9847	9856							0.11267337965318802
HKLQVKPRN	9	Unmodified	_HKLQVKPRN_					0	0	0		ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	560.340907	1118.66726	-1.4186	-0.00079489	0.19878	0.00011139	-1.2198	-0.00068351	560.3408941284528	107.87	0.5209	107.91	107.45	107.97	0.036125	0.011037	0.0019113	NaN	37.159	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9092000			14324	8109	9847	9856							0.11267337965318802
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26318359375	2	438.264136	874.51372	-1.9277	-0.00084486	0.24503	0.00010739	-1.6827	-0.00073747	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.81548	2	2234	2234;2269		20.482	0.48506	1	3507500	+		14325	26240	9848	9857	16510;16511	16510					0.07144347919643224
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2626953125	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.86288	2	2840	2840;3081		28.254	6.3143	1	3384400	+		14326	26240	9848	9857	16512;16513	16512					0.07144347919643224
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633361816406	2	438.264136	874.51372	-1.0936	-0.00047928	-0.34853	-0.00015275	-1.4421	-0.00063203	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.86288	1	2638	2638		26.796	1.3459	1	2862500	+		14327	26240	9848	9857	16514	16514					0.07144347919643224
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2630920410156	2	438.264136	874.51372	-1.2142	-0.00053214	-0.86056	-0.00037715	-2.0748	-0.00090929	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.86791	1	3334	3334		28.254	6.5519	1	4828000	+		14328	26240	9848	9857	16515	16515					0.07144347919643224
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2635192871094	2	438.264136	874.51372	-0.25936	-0.00011367	-1.4504	-0.00063564	-1.7097	-0.00074931	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.81548	2	2665	2665;2713		35.201	8.4046	1	2361100	+		14329	26240	9848	9857	16516;16517	16516					0.07144347919643224
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2626647949219	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.81548	2	2775	2696;2775		33.516	4.366	1	22924000	+		14330	26240	9848	9857	16518;16519	16519					0.07144347919643224
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2634582519531	2	438.264136	874.51372	0.15263	6.689E-05	-1.9074	-0.00083592	-1.7547	-0.00076903	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.80706	1	2047	2047		19.36	0	1	11370000	+		14331	26240	9848	9857	16520	16520					0.07144347919643224
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26336669921875	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.884	1	2761	2761		33.516	10.473	1	22029000	+		14332	26240	9848	9857	16521	16521					0.07144347919643224
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26312255859375	2	438.264136	874.51372	0.037237	1.632E-05	-1.83	-0.00080201	-1.7927	-0.00078569	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.81548	2	2069	1974;2069		35.201	0	1	10667000	+		14333	26240	9848	9857	16522;16523	16523					0.07144347919643224
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2652893066406	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.82419	1	3152	3152		13.775	1.5685	1	21381000	+		14334	26240	9848	9857	16524	16524					0.07144347919643224
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26373291015625	2	438.264136	874.51372	0.27759	0.00012166	-2.5692	-0.001126	-2.2916	-0.0010043	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.88915	1	2593	2593		35.201	1.6851	1	85249000	+		14335	26240	9848	9857	16525	16525					0.07144347919643224
HKLRAPGP	8	Unmodified	_HKLRAPGP_					0	0	0			REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	REV__ENST00000399799.2_1_18:18690928-18691354:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2633972167969	2	438.264136	874.51372	1.5783	0.00069171	-3.9402	-0.0017268	-2.3619	-0.0010351	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.91005	1	2749	2749		42.474	1.9018	1	92475000	+		14336	26240	9848	9857	16526	16526					0.07144347919643224
HKLSYIPPKKI	11	Unmodified	_HKLSYIPPKKI_					0	0	0			REV__nc|ENSG00000078319|A4D2B8-2|PMS2P1	REV__nc|ENSG00000078319|A4D2B8-2|PMS2P1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.78802490234375	3	441.943091	1322.80744	-1.897	-0.00083835	-0.50249	-0.00022207	-2.3994	-0.0010604	442.2769038650616	39.039	0.24847	39.039	38.858	39.106	0					7	5	2	0	0	0	0.17586	1	2473	2473		34.087	13.054	1	74202	+		14337	29714	9849	9858	16527	16527					0.1589507717901597
HKLTVKVSVDK	11	Unmodified	_HKLTVKVSVDK_					0	0	0			REV__ENSG00000019505|ENST00000020926|SYT13	REV__ENSG00000019505|ENST00000020926|SYT13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3851318359375	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.62614	7	12369	12316;12369;12388;12423;12432;12523;13029		41.427	11.109	1	19815000	+		14338	16229	9850	9859	16528;16529;16530;16531;16532;16533;16534	16529					0.1340560990265658
HKLTVKVSVDK	11	Unmodified	_HKLTVKVSVDK_					0	0	0			REV__ENSG00000019505|ENST00000020926|SYT13	REV__ENSG00000019505|ENST00000020926|SYT13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3815307617188	2	627.382437	1252.75032	1.3883	0.00087098	-1.7808	-0.0011173	-0.39257	-0.00024629	627.3811393436591	112.19	0.42046	112.3	112.06	112.48	0.10638					48	15	4	0	0	0	0.69995	2	12083	12083;12091		31.53	3.6476	1	25719000	+		14339	16229	9850	9859	16535;16536	16535					0.1340560990265658
HKLTVKVSVDK	11	Unmodified	_HKLTVKVSVDK_					0	0	0			REV__ENSG00000019505|ENST00000020926|SYT13	REV__ENSG00000019505|ENST00000020926|SYT13	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3822021484375	2	627.382437	1252.75032	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.79	1	117.88	117.38	118.38	0.087753								0	0	0	0.56276	1	12453	12453		31.53	5.9558	1		+		14340	16229	9850	9859	16537	16537					0.1340560990265658
HKLTVKVSVDK	11	Unmodified	_HKLTVKVSVDK_					0	0	0			REV__ENSG00000019505|ENST00000020926|SYT13	REV__ENSG00000019505|ENST00000020926|SYT13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.383544921875	2	627.382437	1252.75032	-1.2001	-0.00075294	0.60915	0.00038217	-0.59097	-0.00037077	627.3827611804128	112.09	1.416	112.07	111.56	112.98	-0.01989					130	45	4	0	0	0	0.7144	1	11932	11932		29.17	3.596	1	42384000	+		14341	16229	9850	9859	16538	16538					0.1340560990265658
HKLVKLYPLGD	11	Unmodified	_HKLVKLYPLGD_					0	0	0			REV__nc|ENSG00000066468|P21802-3|FGFR2	REV__nc|ENSG00000066468|P21802-3|FGFR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8826904296875	2	641.87953	1281.74451	2.2004	0.0014124	2.3254	0.0014926	4.5258	0.002905	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.6921	1	10668	10668		32.812	3.6629	1	3624200	+		14342	29701	9851	9860	16539	16539					0.11490511390957181
HKLVLRYP	8	Unmodified	_HKLVLRYP_					0	0	0		ENSG00000123908|ENST00000220592|AGO2;nc|ENSG00000123908|Q9UKV8-2|AGO2	ENSG00000123908|ENST00000220592|AGO2	ENSG00000123908|ENST00000220592|AGO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3177490234375	2	513.316369	1024.61818	-0.34905	-0.00017917	1.0647	0.00054651	0.71561	0.00036734	513.8184615031363	53.608	1.3919	53.546	53.049	54.441	-0.062065					64	37	3	0	0	0	0.84634	1	4352	4352		60.294	28.339	1	277190			14343	3294	9852	9861	16540	16540					0.10686049676360199
HKMMVILFRLI	11	Unmodified	_HKMMVILFRLI_					0	0	0			REV__ENST00000492022.1_1_19:58727564-58727924:+|nuORF	REV__ENST00000492022.1_1_19:58727564-58727924:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.62322998046875	3	467.613811	1399.8196	-0.97759	-0.00045714	-4.0662	-0.0019014	-5.0437	-0.0023585	467.61299209625247	107.45	0.41473	107.59	107.44	107.86	0.13866					12	9	2	0	0	0	0.17273	1	11574	11574		29.551	13.021	1	138350	+		14344	27666	9853	9862	16541	16541					0.13568654326240903
HKMRIIAFV	9	Unmodified	_HKMRIIAFV_					0	0	0		nc|ENSG00000159352|P55036-2|PSMD4;ENSG00000159352|ENST00000368884|PSMD4;ENST00000462970.5_1_1:151227258-151237442:+|nuORF	nc|ENSG00000159352|P55036-2|PSMD4	nc|ENSG00000159352|P55036-2|PSMD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.829833984375	2	557.831329	1113.6481	3.0808	0.0017186	-3.8977	-0.0021743	-0.81694	-0.00045571	557.8291525228157	101	1.6416	100.95	100.53	102.17	-0.052116					75	38	3	0	0	0	0.7932	1	11011	11011		25.45	1.2474	1	714690			14345	5526	9854	9863	16542	16542					0.0958266535005805
HKMRIIAFV	9	Unmodified	_HKMRIIAFV_					0	0	0		nc|ENSG00000159352|P55036-2|PSMD4;ENSG00000159352|ENST00000368884|PSMD4;ENST00000462970.5_1_1:151227258-151237442:+|nuORF	nc|ENSG00000159352|P55036-2|PSMD4	nc|ENSG00000159352|P55036-2|PSMD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.830078125	2	557.831329	1113.6481	1.3464	0.00075106	-2.3323	-0.001301	-0.98587	-0.00054995	557.8300995899048	100.89	1.6699	100.93	100.47	102.14	0.046356					80	39	3	0	0	0	0.7932	1	10832	10832		24.203	3.2558	1	658310			14346	5526	9854	9863	16543	16543					0.0958266535005805
HKNPRKGHK	9	Unmodified	_HKNPRKGHK_					0	0	0			REV__ENSG00000101825|ENST00000217939|MXRA5	REV__ENSG00000101825|ENST00000217939|MXRA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.3231201171875	2	551.323048	1100.63154	-0.57748	-0.00031838	-0.24811	-0.00013679	-0.82559	-0.00045516	551.32297252947	34.454	0.51962	34.449	34.174	34.693	-0.0047417					18	12	2	0	0	0	0.77546	1	2079	2079		31.955	2.8053	1	56015	+		14347	17304	9855	9864	16544	16544					0.08525300508313194
HKPARLGP	8	Unmodified	_HKPARLGP_					0	0	0		ENST00000487527.5_1_17:27941043-27941295:+|nuORF	ENST00000487527.5_1_17:27941043-27941295:+|nuORF	ENST00000487527.5_1_17:27941043-27941295:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2640380859375	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.81548	1	2888	2888		20.482	1.1219	1	21381000			14348	12602	9856	9865	16545	16545					0.07144347919654592
HKPLIRGGRDV	11	Unmodified	_HKPLIRGGRDV_					0	0	0			REV__ENST00000325327.3_1_19:2429314-2429548:-|nuORF	REV__ENST00000325327.3_1_19:2429314-2429548:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	624.3745727539062	2	624.370195	1246.72584	-0.063393	-3.958E-05	0.43297	0.00027034	0.36958	0.00023076	624.8723580953412	103.7	0.7278	103.7	103.47	104.2	0					26	17	2	0	0	0	0.74763	1	10654	10654		22.58	2.5829	1	657170	+		14349	25060	9857	9866	16546	16546					0.1123439453976971
HKPSGPARS	9	Unmodified	_HKPSGPARS_					0	0	0		ENST00000302418.4_1_10:32344946-32345177:-|nuORF	ENST00000302418.4_1_10:32344946-32345177:-|nuORF	ENST00000302418.4_1_10:32344946-32345177:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.7539367675781	2	468.754133	935.493713	-0.31111	-0.00014583	0.61069	0.00028626	0.29957	0.00014043	468.75440753286836	21.774	0.64083	21.709	21.493	22.134	-0.064743					31	20	2	0	0	0	0.7932	1	656	656		25.574	0.12388	1	48957			14350	9818	9858	9867	16547	16547					0.023385521890418204
HKPSLLGP	8	Unmodified	_HKPSLLGP_					0	0	0			REV__ENST00000550265.5_1_12:53608380-53613977:-|nuORF	REV__ENST00000550265.5_1_12:53608380-53613977:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.7527160644531	2	424.75307	847.491587	0.12148	5.16E-05	-1.3322	-0.00056587	-1.2107	-0.00051427	424.75237083509853	66.591	1.0467	67.142	66.525	67.572	0.55071					64	32	3	0	0	0	0.87479	1	7300	7300		30.504	3.7075	1	363930	+		14351	28596	9859	9868	16548	16548					0.061741234512510346
HKQCIHKIIF	10	Unmodified	_HKQCIHKIIF_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.9109191894531	3	422.909504	1265.70668	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.12	1	116.09	115.59	116.59	-0.037872								0	0	0	0.45132	1	13941	13941		11.097	0	1		+		14352	23025	9860	9869	16549	16549					0.08445721924499594
HKQKKWIIAS	10	Unmodified	_HKQKKWIIAS_					0	0	0			REV__ENST00000466893.5_1_3:62262350-62302793:-|nuORF	REV__ENST00000466893.5_1_3:62262350-62302793:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8704833984375	2	619.87204	1237.72953	-0.30615	-0.00018977	-3.8344	-0.0023768	-4.1405	-0.0025666	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.86763	1	10290	10290		26.693	2.1737	1	4796900	+		14353	27139	9861	9870	16550	16550					0.12017064313681658
HKQKWEPY	8	Unmodified	_HKQKWEPY_					0	0	0			REV__ENSG00000214530|ENST00000334805|STARD10	REV__ENSG00000214530|ENST00000334805|STARD10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.2852783203125	2	558.285266	1114.55598	0.12978	7.2453E-05	-1.5249	-0.00085134	-1.3951	-0.00077888	558.2839602042076	75.399	0.59948	75.353	75.025	75.624	-0.045982					34	15	3	0	0	0	0.89043	1	7450	7450		35.618	2.8059	1	108530	+		14354	23656	9862	9871	16551	16551					0.0032827853738126578
HKQLRLRVCV	10	Unmodified	_HKQLRLRVCV_					0	0	0			REV__ENSG00000198719|ENST00000366756|DLL1	REV__ENSG00000198719|ENST00000366756|DLL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3802490234375	2	626.376966	1250.73938	-0.23069	-0.0001445	3.2923	0.0020622	3.0616	0.0019177	626.3789495998162	107.88	0.52493	107.84	107.4	107.93	-0.042404					39	12	4	0	0	0	0.86589	1	11755	11755		29.15	9.1528	1	14990000	+		14355	23362	9863	9872	16552	16552					0.1240392904737746
HKQLRLRVCV	10	Unmodified	_HKQLRLRVCV_					0	0	0			REV__ENSG00000198719|ENST00000366756|DLL1	REV__ENSG00000198719|ENST00000366756|DLL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3812255859375	2	626.376966	1250.73938	2.9114	0.0018237	3.0388	0.0019035	5.9503	0.0037271	626.3789104514062	116.12	0.91767	116.1	115.83	116.75	-0.02433					47	26	2	0	0	0	0.85466	1	12852	12852		20.947	0	1	135240	+		14356	23362	9863	9872	16553	16553					0.1240392904737746
HKQLRLRVCV	10	Unmodified	_HKQLRLRVCV_					0	0	0			REV__ENSG00000198719|ENST00000366756|DLL1	REV__ENSG00000198719|ENST00000366756|DLL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.2978210449219	3	417.920403	1250.73938	0.32776	0.00013698	0.24955	0.00010429	0.57732	0.00024127	417.9203742964009	55.76	1.1252	55.859	55.08	56.206	0.09919					47	36	2	0	0	0	0.37624	1	4712	4712		20.837	0.52214	1	52240	+		14357	23362	9863	9872	16554	16554					0.1240392904737746
HKQPYHLRLLR	11	Unmodified	_HKQPYHLRLLR_					0	0	0			REV__ENSG00000083444|ENST00000196061|PLOD1	REV__ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.6251525878906	3	487.624755	1459.85244	0.28179	0.00013741	-0.90791	-0.00044272	-0.62612	-0.00030531	487.6242665719685	15.821	0.22258	15.222	15.068	15.291	-0.59873					10	6	3	0	0	0	0.76251	1	58	58		19.263	2.7328	1	65067	+		14358	16853	9864	9873	16555	16555					0.14090320764898934
HKQPYHLRLLR	11	Unmodified	_HKQPYHLRLLR_					0	0	0			REV__ENSG00000083444|ENST00000196061|PLOD1	REV__ENSG00000083444|ENST00000196061|PLOD1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	487.624755	1459.85244	0.32485	0.0001584	-0.13101	-6.3883E-05	0.19384	9.4519E-05	487.62456881471405	15.835	0.16033	15.345	15.226	15.387	-0.48917	0.061528	0.00065748	NaN	19.263	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31104	+		14359	16853	9864	9873							0.14090320764898934
HKQPYHLRLLR	11	Unmodified	_HKQPYHLRLLR_					0	0	0			REV__ENSG00000083444|ENST00000196061|PLOD1	REV__ENSG00000083444|ENST00000196061|PLOD1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	487.624755	1459.85244	0.28179	0.00013741	-0.90791	-0.00044272	-0.62612	-0.00030531	487.6242665719685	15.821	0.22258	15.222	15.068	15.291	-0.59873	-0.061528	-0.00047903	NaN	19.263	10	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65067	+		14360	16853	9864	9873							0.14090320764898934
HKQTLFASL	9	Unmodified	_HKQTLFASL_					0	0	0		nc|ENSG00000055118|Q12809-6|KCNH2;ENST00000461280.1_1_7:150646989-150652738:-|nuORF;ENST00000473610.5_1_7:150646989-150648224:-|nuORF;nc|ENSG00000055118|Q12809-5|KCNH2	nc|ENSG00000055118|Q12809-6|KCNH2;nc|ENSG00000055118|Q12809-5|KCNH2	nc|ENSG00000055118|Q12809-6|KCNH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7953491210938	2	522.795466	1043.57638	-0.57986	-0.00030315	0.50996	0.00026661	-0.069892	-3.6539E-05	522.7958436643665	57.671	0.74409	58.065	57.655	58.399	0.39407					53	18	4	0	0	0	0.51307	1	6010	6010		51.335	0	1	1228100			14361	12020;14758	9865	9874	16556	16556					0.056334491971938405
HKQTLFASL	9	Unmodified	_HKQTLFASL_					0	0	0		nc|ENSG00000055118|Q12809-6|KCNH2;ENST00000461280.1_1_7:150646989-150652738:-|nuORF;ENST00000473610.5_1_7:150646989-150648224:-|nuORF;nc|ENSG00000055118|Q12809-5|KCNH2	nc|ENSG00000055118|Q12809-6|KCNH2;nc|ENSG00000055118|Q12809-5|KCNH2	nc|ENSG00000055118|Q12809-6|KCNH2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	522.795466	1043.57638	0.60427	0.00031591	-0.4962	-0.00025941	0.10807	5.6498E-05	522.7953135933902	57.532	0.87128	58.087	57.601	58.472	0.55513	0.011287	-0.00042964	NaN	51.335	50	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1292800			14362	12020;14758	9865	9874							0.056334491971938405
HKRATIICGIR	11	Unmodified	_HKRATIICGIR_					0	0	0			REV__ENSG00000164022|ENST00000672341|AIMP1	REV__ENSG00000164022|ENST00000672341|AIMP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3746337890625	2	634.374423	1266.73429	1.4899	0.00094515	2.5318	0.0016061	4.0217	0.0025513	634.3759288253121	109.92	1.3103	110.04	109.37	110.68	0.12289					100	52	2	0	0	0	0.74022	1	11865	11865		24.232	5.1283	1	14976000	+		14363	21009	9866	9875	16557	16557					0.11159625184768629
HKRATIICGIR	11	Unmodified	_HKRATIICGIR_					0	0	0			REV__ENSG00000164022|ENST00000672341|AIMP1	REV__ENSG00000164022|ENST00000672341|AIMP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3770141601562	2	634.374423	1266.73429	1.4924	0.00094672	2.1049	0.0013353	3.5973	0.002282	634.3756362582708	111.65	0.59207	111.76	111.45	112.04	0.11118					53	17	5	0	0	0	0.70737	1	12037	12037		30.318	6.795	1	27955000	+		14364	21009	9866	9875	16558	16558					0.11159625184768629
HKRATIICGIR	11	Unmodified	_HKRATIICGIR_					0	0	0			REV__ENSG00000164022|ENST00000672341|AIMP1	REV__ENSG00000164022|ENST00000672341|AIMP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3760375976562	2	634.374423	1266.73429	0.93395	0.00059247	3.0099	0.0019094	3.9439	0.0025019	634.3760615979032	111.89	0.64575	111.96	111.47	112.12	0.069542					57	19	4	0	0	0	0.66929	1	12008	12008		36.447	0.82846	1	7169800	+		14365	21009	9866	9875	16559	16559					0.11159625184768629
HKRATIICGIR	11	Unmodified	_HKRATIICGIR_					0	0	0			REV__ENSG00000164022|ENST00000672341|AIMP1	REV__ENSG00000164022|ENST00000672341|AIMP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.376953125	2	634.374423	1266.73429	2.1873	0.0013876	2.4807	0.0015737	4.668	0.0029612	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.7144	1	13382	13382		29.17	0.020503	1	6886400	+		14366	21009	9866	9875	16560	16560					0.11159625184768629
HKRATIICGIR	11	Unmodified	_HKRATIICGIR_					0	0	0			REV__ENSG00000164022|ENST00000672341|AIMP1	REV__ENSG00000164022|ENST00000672341|AIMP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.878662109375	2	634.374423	1266.73429	6.6613	0.0042258	-2.596	-0.0016468	4.0653	0.0025789	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.732	1	13464	13464		26.063	4.3776	1	7041100	+		14367	21009	9866	9875	16561	16561					0.11159625184768629
HKRGVRILTG	10	Unmodified	_HKRGVRILTG_					0	0	0		nc|ENSG00000180881|Q9BXY5-3|CAPS2;ENST00000409004.5_1_12:75670025-75710066:-|nuORF;nc|ENSG00000180881|Q9BXY5-2|CAPS2;nc|ENSG00000180881|Q9BXY5|CAPS2;ENSG00000180881|ENST00000699294|CAPS2;nc|ENSG00000180881|Q9BXY5-5|CAPS2	nc|ENSG00000180881|Q9BXY5-3|CAPS2	nc|ENSG00000180881|Q9BXY5-3|CAPS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.85400390625	2	568.854181	1135.69381	-1.1637	-0.000662	-0.61846	-0.00035181	-1.7822	-0.0010138	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.85466	1	11177	11177		20.947	0.95016	1	50786000			14368	7355	9867	9876	16562	16562					0.13139026856629243
HKRLLYWVGVI	11	Unmodified	_HKRLLYWVGVI_					0	0	0			REV__nc|ENSG00000101294|Q8TCT9|HM13	REV__nc|ENSG00000101294|Q8TCT9|HM13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.94805908203125	3	461.946835	1382.81868	0.76575	0.00035374	2.1279	0.00098299	2.8937	0.0013367	461.94782502952427	107.84	0.75671	107.93	107.26	108.01	0.084404					86	18	6	0	0	0	0.69931	1	11586	11586		31.634	1.0654	1	101570000	+		14369	17263	9868	9877	16563	16563					0.14257899273161456
HKSGKLHAH	9	Unmodified	_HKSGKLHAH_					0	0	0			REV__nc|ENSG00000165061|Q9H898-2|ZMAT4	REV__nc|ENSG00000165061|Q9H898-2|ZMAT4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.7251281738281	2	507.783225	1013.5519	-0.076641	-3.8917E-05	-2.1473	-0.0010904	-2.224	-0.0011293	507.7822638207894	32.167	0.44833	32.116	31.872	32.32	-0.051033					12	9	2	0	0	0	0.20789	1	1858	1858		23.042	2.5607	1	28131	+		14370	21143	9869	9878	16564	16564					0.04566233834304967
HKSKDKAGT	9	Unmodified	_HKSKDKAGT_					0	0	0		nc|ENSG00000154822|Q9UPR0-2|PLCL2;nc|ENSG00000154822|Q9UPR0-3|PLCL2;ENSG00000154822|ENST00000615277|PLCL2	nc|ENSG00000154822|Q9UPR0-2|PLCL2	nc|ENSG00000154822|Q9UPR0-2|PLCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.2669982910156	2	486.267073	970.519593	1.0382	0.00050483	-0.85752	-0.00041699	0.18065	8.7843E-05	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.76764	1	9079	9079		34.173	2.6427	1	1819100			14371	5299	9870	9879	16565	16565					0.03315401640657001
HKSQLFSCV	9	Unmodified	_HKSQLFSCV_					0	0	0			REV__ENST00000537905.5_1_11:71735188-71747007:-|nuORF	REV__ENST00000537905.5_1_11:71735188-71747007:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8268432617188	2	524.765852	1047.51715	2.8896	0.0015164	4.0253	0.0021123	6.9148	0.0036287	525.2710083832702	99.274	0.36215	99.22	99.038	99.401	-0.053741					11	8	2	0	0	0	0.20789	1	10725	10725		56.721	14.325	1	93586	+		14372	28426	9871	9880	16566	16566					-0.004707700886456223
HKSRVKGYLRL	11	Unmodified	_HKSRVKGYLRL_					0	0	0		ENST00000503468.5_1_15:56126312-56207567:-|nuORF;ENSG00000069869|ENST00000435532|NEDD4;nc|ENSG00000069869|P46934-2|NEDD4;nc|ENSG00000069869|P46934|NEDD4	ENST00000503468.5_1_15:56126312-56207567:-|nuORF	ENST00000503468.5_1_15:56126312-56207567:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.9486083984375	3	452.945606	1355.81499	2.7603	0.0012503	3.2001	0.0014495	5.9604	0.0026998	452.94691660848173	107.88	0.36398	107.85	107.55	107.92	-0.031487					25	8	4	0	0	0	0.72374	1	11956	11956		27.644	0.59661	1	5035400			14373	1225	9872	9881	16567	16567					0.15131229499320398
HKTFRIKRF	9	Unmodified	_HKTFRIKRF_					0	0	0		ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.5843811035156	3	411.584008	1231.73019	1.0715	0.00044102	-0.52849	-0.00021752	0.54303	0.0002235	411.58372332792885	25.568	2.1598	25.311	24.774	26.934	-0.25721					112	48	3	0	0	0	0.6204	1	1315	1315		45.972	12.933	1	1250200			14374	8368	9873	9882	16568	16568					0.123599037533495
HKTFRIKRF	9	Unmodified	_HKTFRIKRF_					0	0	0		ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.5841369628906	3	411.584008	1231.73019	2.5248	0.0010392	-2.1379	-0.00087992	0.38696	0.00015926	411.5831450688618	25.588	2.9561	25.157	24.499	27.455	-0.4311					162	67	5	0	0	0	0.58668	3	1346	1322;1346;1358		47.657	17.088	1	1542200			14375	8368	9873	9882	16569;16570;16571	16570					0.123599037533495
HKTFRIKRFLA	11	Unmodified	_HKTFRIKRFLA_					0	0	0		ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.2922058105469	3	472.957734	1415.85137	0.74004	0.00035001	-1.1588	-0.00054807	-0.41877	-0.00019806	472.9572235267456	34.131	1.5761	34.341	33.44	35.016	0.21002					95	37	4	0	0	0	0.78683	1	2536	2536		14.086	0	1	2079600			14376	8368	9874	9883	16572	16572					0.16008106396020594
HKTFRIKRFLA	11	Unmodified	_HKTFRIKRFLA_					0	0	0		ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.9577331542969	3	472.957734	1415.85137	0.35508	0.00016794	-0.78373	-0.00037067	-0.42864	-0.00020273	472.95736513228775	34.126	1.1444	34.431	33.953	35.097	0.30494					85	27	5	0	0	0	0.67762	4	2527	2515;2527;2539;2553		35.178	16.647	1	1854300			14377	8368	9874	9883	16573;16574;16575;16576	16574					0.16008106396020594
HKVAKTFL	8	Unmodified	_HKVAKTFL_					0	0	0			REV__ENSG00000100592|ENST00000360909|DAAM1	REV__ENSG00000100592|ENST00000360909|DAAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28753662109375	2	472.28982	942.565087	-1.7052	-0.00080536	-2.8033	-0.001324	-4.5086	-0.0021293	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.85277	1	10145	10145		25.45	0	1	40161000	+		14378	17204	9875	9884	16577	16577					0.09150671893701201
HKVHLLCLL	9	Unmodified	_HKVHLLCLL_					0	0	0		ENSG00000154767|ENST00000285021|XPC;nc|ENSG00000154767|Q01831-2|XPC;ENST00000455144.6_1_3:14206267-14209863:-|nuORF	ENSG00000154767|ENST00000285021|XPC	ENSG00000154767|ENST00000285021|XPC	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3260498046875	2	538.325879	1074.63721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.1	1	117.08	116.58	117.58	-0.02433								0	0	0	0.34024	1	12970	12970		17.365	0	1				14379	5295	9876	9885	16578	16578					0.10287262975771228
HKVIKEKV	8	Unmodified	_HKVIKEKV_					0	0	0		nc|ENSG00000182670|P53804-3|TTC3;nc|ENSG00000182670|P53804-2|TTC3;ENSG00000182670|ENST00000418766|TTC3;ENST00000399586.2_1_X:74960734-74966719:-|nuORF	nc|ENSG00000182670|P53804-3|TTC3;ENST00000399586.2_1_X:74960734-74966719:-|nuORF	ENST00000399586.2_1_X:74960734-74966719:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	490.8151550292969	2	490.816202	979.617851	-0.68158	-0.00033453	-0.83953	-0.00041205	-1.5211	-0.00074659	490.81573440332073	75.136	0.68554	75.261	74.922	75.608	0.12545					18	16	2	0	0	0	0.85277	1	6980	6980		25.45	3.7478	1	75067			14380	7469;11209	9877	9886	16579	16579					0.127226299565109
HKVRAASA	8	Unmodified	_HKVRAASA_					0	0	0		ENST00000528031.1_1_11:75167699-75188792:-|nuORF	ENST00000528031.1_1_11:75167699-75188792:-|nuORF	ENST00000528031.1_1_11:75167699-75188792:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.24456787109375	2	420.245944	838.477334	2.735	0.0011494	-2.6357	-0.0011076	0.099358	4.1755E-05	420.24477323908343	82.873	1.7732	82.932	82.163	83.936	0.059166					62	40	2	0	0	0	0.85277	1	8343	8343		25.45	3.7478	1	129400			14381	13296	9878	9887	16580	16580					0.05163471022933663
HLAALQGHDM	10	Unmodified	_HLAALQGHDM_					0	0	0		ENSG00000187808|ENST00000343905|SOWAHD	ENSG00000187808|ENST00000343905|SOWAHD	ENSG00000187808|ENST00000343905|SOWAHD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8399658203125	2	546.766383	1091.51821	0.84795	0.00046363	-3.803	-0.0020793	-2.955	-0.0016157	546.7643528892149	101.06	0.47539	101.2	100.81	101.29	0.14352					14	11	2	0	0	0	0.37624	1	10566	10566		51.335	0	1	64636			14382	7884	9879	9888	16581	16581					-0.02388555719744545
HLAENLKVL	9	Unmodified	_HLAENLKVL_					0	0	0		nc|ENSG00000166589|O75309-3|CDH16;nc|ENSG00000166589|O75309-4|CDH16;nc|ENSG00000166589|O75309-2|CDH16;ENSG00000166589|ENST00000299752|CDH16	nc|ENSG00000166589|O75309-3|CDH16	nc|ENSG00000166589|O75309-3|CDH16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8102416992188	2	518.811116	1035.60768	1.249	0.000648	-2.9044	-0.0015068	-1.6554	-0.00085883	518.8096033734023	97.807	0.8631	98.198	97.641	98.504	0.39065					64	20	5	0	0	0	0.67345	1	11827	11827		42.396	1.8235	1	3689300			14383	6214	9880	9889	16582	16582					0.09130022231283874
HLANAKQEL	9	Unmodified	_HLANAKQEL_					0	0	0			REV__ENSG00000185722|ENST00000341657|ANKFY1	REV__ENSG00000185722|ENST00000341657|ANKFY1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2820434570312	2	512.282723	1022.55089	-0.3427	-0.00017556	-2.3981	-0.0012285	-2.7408	-0.0014041	512.2814243636773	86.125	3.8841	86.31	84.842	88.726	0.18523					170	91	2	0	0	0	0.77546	1	8557	8557		31.955	4.0726	1	381930	+		14384	22787	9881	9890	16583	16583					0.0405197467475773
HLAQRRLQHQ	10	Unmodified	_HLAQRRLQHQ_					0	0	0			REV__ENST00000397473.6_1_13:99910526-99910643:-|nuORF	REV__ENST00000397473.6_1_13:99910526-99910643:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3692626953125	2	643.863069	1285.71158	2.67	0.0017191	-0.82176	-0.0005291	1.8482	0.00119	644.3639948226831	114.2	1.5594	114.17	113.55	115.11	-0.024452					72	57	2	0	0	0	0.37624	1	12616	12616		23.042	0	1	183190	+		14385	26167	9882	9891	16584	16584					0.0801574211152456
HLARKGLS	8	Unmodified	_HLARKGLS_					0	0	0			REV__ENST00000379937.6_3_14:105695225-105767012:-|nuORF	REV__ENST00000379937.6_3_14:105695225-105767012:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.268310546875	2	441.269419	880.524284	-1.4055	-0.00062019	1.6116	0.00071114	0.2061	9.0946E-05	441.2699746440924	102.08	1.2621	102.27	101.76	103.02	0.19484					69	30	3	0	0	0	0.87922	1	10756	10756		31.955	6.5047	1	596870	+		14386	25932	9883	9892	16585	16585					0.07924330574087435
HLARKKKKKS	10	Unmodified	_HLARKKKKKS_					0	0	0			REV__L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|34|1|sense	REV__L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|34|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.29217529296875	3	408.606813	1222.79861	-0.014453	-5.9056E-06	-0.7738	-0.00031618	-0.78825	-0.00032209	408.6061807358054	20.092	1.2241	19.463	18.983	20.207	-0.62961					65	26	3	0	0	0	0.37624	1	614	614		11.636	4.6172	1	304270	+		14387	29557	9884	9893	16586	16586					0.19612148333226287
HLATSRLPSF	10	Unmodified	_HLATSRLPSF_					0	0	0		ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.8103637695312	2	564.811648	1127.60874	0.056578	3.1956E-05	-0.17648	-9.9679E-05	-0.1199	-6.7723E-05	564.811406743475	46.968	0.64133	46.88	46.469	47.11	-0.087646					30	17	2	0	0	0	0.86348	1	3494	3494		31.53	3.6476	1	288640			14388	2876	9885	9894	16587	16587					0.05004236600166223
HLAYALVL	8	Unmodified	_HLAYALVL_					0	0	0			REV__ENST00000514672.1_1_5:81605958-81614116:+|nuORF	REV__ENST00000514672.1_1_5:81605958-81614116:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.2491760253906	2	450.271096	898.527639	-1.3488	-0.00060734	1.9058	0.00085811	0.55693	0.00025077	450.27185624679845	63.5	0.90736	63.887	63.314	64.221	0.38681					35	20	2	0	0	0	0.4196	1	6778	6778		33.493	19.718	1	93928	+		14389	28018	9886	9895	16588	16588					0.07431580628076517
HLCRHCAQY	9	Carbamidomethyl (C)	_HLC(Carbamidomethyl (C))RHCAQY_	HLC(0.639)RHC(0.361)AQY		HLC(2.5)RHC(-2.5)AQY		0	1	0		ENST00000469881.1_1_11:3697391-3700990:-|nuORF	ENST00000469881.1_1_11:3697391-3700990:-|nuORF	ENST00000469881.1_1_11:3697391-3700990:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	594.2640380859375	2	594.263484	1186.51242	-1.4341	-0.00085224	3.1933	0.0018977	1.7592	0.0010454	594.2652584151706	48.175	0.59732	48.173	47.93	48.527	-0.002449					28	14	3	0	0	0	0.3636	1	4004	4004		60.294	21.488	2	198190			14390	12210	9887	9896	16589	16589	153				-0.07337977503084403
HLDGTGLAGP	10	Unmodified	_HLDGTGLAGP_					0	0	0			REV__ENSG00000167311|ENST00000397068|ART5	REV__ENSG00000167311|ENST00000397068|ART5	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	469.2423095703125	2	469.240524	936.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.942	1	66.942	66.442	67.442	0								0	0	0	0.45132	1	5909	5909		26.693	1.1189	1		+		14391	21376	9888	9897	16590	16590					-0.004279761419979877
HLDHNQISTV	10	Unmodified	_HLDHNQISTV_					0	0	0		ENSG00000146006|ENST00000274711|LRRTM2	ENSG00000146006|ENST00000274711|LRRTM2	ENSG00000146006|ENST00000274711|LRRTM2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353515625	2	582.293819	1162.57309	3.1744	0.0018485	1.3973	0.00081365	4.5717	0.0026621	582.2945768110768	103.85	0.12168	103.81	103.72	103.84	-0.043755					4	2	2	0	0	0	0.37624	1	11390	11390		23.523	0	1	45972			14392	4812	9889	9898	16591	16591					-0.0016984564749691344
HLEAILTKISL	11	Unmodified	_HLEAILTKISL_					0	0	0		ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.37841796875	2	619.379363	1236.74417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.77	1	102.03	101.53	102.53	0.26322								0	0	0	0.56276	1	12340	12340		31.53	5.9558	1				14393	3059	9890	9899	16592	16592					0.1352709167113062
HLEKLLVQP	9	Unmodified	_HLEKLLVQP_					0	0	0		ENST00000453914.1_1_20:34064387-34078805:-|nuORF	ENST00000453914.1_1_20:34064387-34078805:-|nuORF	ENST00000453914.1_1_20:34064387-34078805:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8264770507812	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.78	1	114.76	114.26	115.26	-0.024452								0	0	0	0.31117	1	12722	12722		26.693	1.1189	1				14394	11936	9891	9900	16593	16593					0.10418595265377917
HLEKQLILEKF	11	Unmodified	_HLEKQLILEKF_					0	0	0			REV__ENSG00000145715|ENST00000274376|RASA1;REV__ENST00000515800.6_1_5:86667940-86686697:+|nuORF	REV__ENSG00000145715|ENST00000274376|RASA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.6085205078125	3	466.609889	1396.80784	-1.7237	-0.0008043	-2.4021	-0.0011209	-4.1258	-0.0019251	466.60870138635494	100.22	2.0707	100.39	99.305	101.38	0.17199					124	48	3	0	0	0	0.74771	1	10449	10449		22.562	5.3948	1	463800	+		14395	19959;28041	9892	9901	16594	16594					0.12530452108217105
HLEQFEEF	8	Unmodified	_HLEQFEEF_					0	0	0			REV__ENSG00000133056|ENST00000684373|PIK3C2B	REV__ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.7453002929688	2	539.745639	1077.47673	-0.054075	-2.9187E-05	-0.087839	-4.7411E-05	-0.14191	-7.6598E-05	539.7454730257659	54.937	0.881	55.344	54.948	55.829	0.40663					37	20	3	0	0	0	0.60357	1	5605	5605		71.296	5.4925	1	792110	+		14396	19053	9893	9902	16595	16595					-0.058914132074278314
HLEQFEEF	8	Unmodified	_HLEQFEEF_					0	0	0			REV__ENSG00000133056|ENST00000684373|PIK3C2B	REV__ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.3059692382812	2	539.745639	1077.47673	-0.054075	-2.9187E-05	-0.087839	-4.7411E-05	-0.14191	-7.6598E-05	539.7454730257659	54.937	0.881	55.344	54.948	55.829	0.40663					37	20	3	0	0	0	0.4196	1	5627	5627		56.721	12.604	1	792110	+		14397	19053	9893	9902	16596	16596					-0.058914132074278314
HLEQFEEF	8	Unmodified	_HLEQFEEF_					0	0	0			REV__ENSG00000133056|ENST00000684373|PIK3C2B	REV__ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.7453002929688	2	539.745639	1077.47673	-0.63961	-0.00034523	0.64374	0.00034746	0.0041331	2.2308E-06	539.745844378602	54.742	0.7145	55.311	55.027	55.741	0.56836					41	16	4	0	0	0	0.36381	1	5596	5596		82.305	8.05	1	825050	+		14398	19053	9893	9902	16597	16597					-0.058914132074278314
HLERLSRPLNI	11	Unmodified	_HLERLSRPLNI_					0	0	0			REV__nc|ENSG00000126500|Q9NZU1-1|FLRT1	REV__nc|ENSG00000126500|Q9NZU1-1|FLRT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2607727050781	3	449.933366	1346.77827	-0.15017	-6.7566E-05	-0.83044	-0.00037364	-0.98061	-0.00044121	449.93282464751957	68.595	1.8456	69.142	67.982	69.827	0.54694					58	43	3	0	0	0	0.17586	1	7527	7527		11.932	0	1	121950	+		14399	15499	9894	9903	16598	16598					0.11874932882756184
HLFKLKTT	8	Unmodified	_HLFKLKTT_					0	0	0		ENSG00000266967|ENST00000427569|AARSD1;nc|ENSG00000266967|Q9BTE6-2|AARSD1;nc|ENSG00000266967|Q9BTE6-3|AARSD1;ENST00000416949.5_1_17:41109156-41116489:-|nuORF;ENST00000441280.7_1_17:41108193-41116457:-|nuORF	ENSG00000266967|ENST00000427569|AARSD1	ENSG00000266967|ENST00000427569|AARSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.29815673828125	2	494.302927	986.591301	-0.90607	-0.00044787	-2.9879	-0.0014769	-3.894	-0.0019248	494.3015193767554	16.639	0.57203	16.557	16.369	16.941	-0.0821					38	24	2	0	0	0	0.87479	1	180	180		30.504	0.6621	1	32822			14400	8954	9895	9904	16599	16599					0.09746941065179726
HLFRSRRRRSA	11	Unmodified	_HLFRSRRRRSA_					0	0	0			REV__ENST00000250937.7_1_19:3496808-3500628:-|nuORF	REV__ENST00000250937.7_1_19:3496808-3500628:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.2825927734375	3	481.283503	1440.82868	-0.094123	-4.53E-05	-0.76388	-0.00036764	-0.858	-0.00041294	481.28309921299575	101.72	1.6724	101.74	100.69	102.36	0.01989					105	39	3	0	0	0	0.78683	1	10902	10902		14.086	1.1285	1	543600	+		14401	24284	9896	9905	16600	16600					0.1258990005112537
HLFSLVPKRK	10	Unmodified	_HLFSLVPKRK_					0	0	0			REV__ENST00000262376.10_1_16:4930962-4931145:+|nuORF	REV__ENST00000262376.10_1_16:4930962-4931145:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.9220886230469	3	408.92403	1223.75026	-0.96202	-0.00039339	-3.3721	-0.0013789	-4.3341	-0.0017723	408.92267652699474	104.87	3.639	104.87	103.29	106.93	0					182	86	5	0	0	0	0.85958	1	10793	10793		15.333	0.63944	1	1119800	+		14402	24418	9897	9906	16601	16601					0.14733654693304743
HLGGKRFPVL	10	Unmodified	_HLGGKRFPVL_					0	0	0			REV__ENST00000556036.5_2_14:45605458-45606311:+|nuORF	REV__ENST00000556036.5_2_14:45605458-45606311:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.341796875	2	562.340375	1122.6662	0.62922	0.00035384	-4.3521	-0.0024473	-3.7228	-0.0020935	562.3377185634861	16.893	0.51688	16.282	15.958	16.475	-0.6107					19	11	2	0	0	0	0.85694	1	200	200		21.96	1.9631	1	104890	+		14403	28693	9898	9907	16602	16602					0.10977123596421734
HLGKYKIQWKI	11	Unmodified	_HLGKYKIQWKI_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|14|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|14|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|14|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2867126464844	3	471.950357	1412.82924	3.0904	0.0014585	-0.39348	-0.0001857	2.6969	0.0012728	471.9501713198561	105.03	0.67872	105.26	105.01	105.69	0.2268					36	16	4	0	0	0	0.76579	1	12864	12864		18.531	0.69791	1	295370			14404	14697	9899	9908	16603	16603					0.13933881927596303
HLGLLLAAWPQ	11	Unmodified	_HLGLLLAAWPQ_					0	0	0		ENST00000377921.7_1_10:16859252-16859300:-|nuORF	ENST00000377921.7_1_10:16859252-16859300:-|nuORF	ENST00000377921.7_1_10:16859252-16859300:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	609.8540649414062	2	609.853316	1217.69208	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.885	1	53.966	53.466	54.466	0.081524								0	0	0	0.56276	1	4427	4427		49.442	16.629	1				14405	10848	9900	9909	16604	16604					0.09193973048036241
HLGNLHSMMA	10	Unmodified	_HLGNLHSMMA_					0	0	0			REV__ENSG00000119547|ENST00000491143|ONECUT2	REV__ENSG00000119547|ENST00000491143|ONECUT2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.7907104492188	2	555.762786	1109.51102	0.20476	0.0001138	-4.0122	-0.0022298	-3.8075	-0.002116	556.2619230374029	27.362	0.58204	27.324	26.971	27.553	-0.038523					17	13	2	0	0	0	0.37624	1	1312	1312		58.782	10.866	1	24993	+		14406	18358	9901	9910	16605	16605					-0.03935611591805355
HLGRQLILADQ	11	Unmodified	_HLGRQLILADQ_					0	0	0			REV__ENST00000490981.1_1_3:12545028-12546775:+|nuORF	REV__ENST00000490981.1_1_3:12545028-12546775:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	632.3628540039062	2	632.362036	1262.70952	1.871	0.0011831	-3.2397	-0.0020487	-1.3688	-0.00086555	632.3597010861852	102.69	0.76917	102.92	102.65	103.42	0.22556					66	24	3	0	0	0	0.66929	1	12505	12505		36.447	0.82846	1	27101000	+		14407	20399	9902	9911	16606	16606					0.08867268583048826
HLGRRRPL	8	Unmodified	_HLGRRRPL_					0	0	0		nc|ENSG00000174791|Q13671-2|RIN1;ENSG00000174791|ENST00000311320|RIN1;ENST00000526246.5_1_11:66099749-66102792:-|nuORF	nc|ENSG00000174791|Q13671-2|RIN1	nc|ENSG00000174791|Q13671-2|RIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	502.814208984375	2	502.814859	1003.61517	-0.072215	-3.6311E-05	-2.3571	-0.0011852	-2.4293	-0.0012215	502.8137358537146	97.184	3.7296	97.233	96.655	100.38	0.048157					256	86	5	0	0	0	0.83466	1	10426	10426		23.037	0	1	22931000			14408	6963	9903	9912	16607	16607					0.11350219342227774
HLHGFSGYNTY	11	Unmodified	_HLHGFSGYNTY_					0	0	0			REV__nc|ENSG00000176842|P78411-3|IRX5	REV__nc|ENSG00000176842|P78411-3|IRX5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3931274414062	2	648.293819	1294.57309	-1.1409	-0.00073966	3.224	0.0020901	2.0831	0.0013505	648.296091346025	107.32	0.20236	107.35	107.29	107.49	0.036125					5	4	2	0	0	0	0.17457	1	11463	11463		42.864	13.694	1	61350	+		14409	22147	9904	9913	16608	16608					-0.062418456474688355
HLHINLEL	8	Unmodified	_HLHINLEL_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7800598144531	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.884	1	8285	8285		33.516	0	1	385180			14410	7581	9905	9914	16609	16609					0.055891800256858915
HLHQLRPLRV	10	Unmodified	_HLHQLRPLRV_					0	0	0			REV__ENST00000495746.5_1_1:119575954-119683267:-|nuORF	REV__ENST00000495746.5_1_1:119575954-119683267:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5979309082031	3	423.594796	1267.76256	2.8995	0.0012282	3.8264	0.0016209	6.7259	0.0028491	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.86201	1	11661	11661		22.58	2.5492	1	6928400	+		14411	18231	9906	9915	16610	16610					0.1393869115634061
HLIATLAVH	9	Unmodified	_HLIATLAVH_					0	0	0			REV__ENSG00000205978|ENST00000382554|NYNRIN	REV__ENSG00000205978|ENST00000382554|NYNRIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7906799316406	2	487.792727	973.5709	-1.4525	-0.00070854	-3.1625	-0.0015427	-4.6151	-0.0022512	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.7932	1	7735	7735		26.796	0.10319	1	503530	+		14412	23582	9907	9916	16611	16611					0.08305770405377189
HLIIKYKH	8	Unmodified	_HLIIKYKH_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|38|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|38|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|38|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.328857421875	2	526.324194	1050.63383	-0.93594	-0.00049261	2.1786	0.0011466	1.2426	0.00065403	526.3251692142991	71.452	0.88377	71.528	70.921	71.805	0.076225					58	42	2	0	0	0	0.81548	1	6469	6469		20.482	1.1219	1	116590			14413	14512	9908	9917	16612	16612					0.11054336193410563
HLIISQCISCW	11	Unmodified	_HLIISQCISCW_					0	0	0			REV__ENST00000495272.5_1_1:95705378-95709907:+|nuORF	REV__ENST00000495272.5_1_1:95705378-95709907:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.8864440917969	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.692	1	27.761	27.261	28.261	0.06868								0	0	0	0.56276	1	1114	1114		28.577	0	1		+		14414	27735	9909	9918	16613	16613					-0.012699271806695833
HLIKGRLKEN	10	Unmodified	_HLIKGRLKEN_					0	0	0		nc|ENSG00000136631|Q9NRW7-2|VPS45;ENSG00000136631|ENST00000644510|VPS45	nc|ENSG00000136631|Q9NRW7-2|VPS45	nc|ENSG00000136631|Q9NRW7-2|VPS45	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3663940429688	2	604.367121	1206.71969	-0.16822	-0.00010167	-0.91026	-0.00055013	-1.0785	-0.0006518	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.86218	1	10771	10771		32.812	5.7651	1	47715000			14415	4123	9910	9919	16614	16614					0.12459876308275852
HLILILFHTG	10	Unmodified	_HLILILFHTG_					0	0	0		ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3533325195312	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.94	1	119.92	119.42	120.42	-0.024033								0	0	0	0.45132	1	13285	13285		17.365	5.1581	1				14416	7359	9911	9920	16615	16615					0.11142874536380987
HLINQIVLP	9	Unmodified	_HLINQIVLP_					0	0	0		chr10:89285264-89286872|20|25.55|0.0|21.28|+|1|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|18;chr10:89285264-89286796|15|22.93|0.0|21.13|+|2|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286796,89288116|IFIT2,None|20	chr10:89285264-89286872|20|25.55|0.0|21.28|+|1|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|18	chr10:89285264-89286872|20|25.55|0.0|21.28|+|1|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8201904296875	2	523.821484	1045.62842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.78	1	102.04	101.54	102.54	0.26322								0	0	0	0.28877	1	12341	12341		35.201	3.2459	1				14417	90	9912	9921	16616	16616					0.10742612610920332
HLIRHQKIHS	10	Unmodified	_HLIRHQKIHS_					0	0	0		ENSG00000187792|ENST00000341976|ZNF70	ENSG00000187792|ENST00000341976|ZNF70	ENSG00000187792|ENST00000341976|ZNF70	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	423.5976867675781	3	423.582667	1267.72617	2.7172	0.0011509	1.1974	0.00050719	3.9146	0.0016581	423.58328175984514	105.77	0.16001	105.74	105.62	105.78	-0.03714					6	3	2	0	0	0	0.37624	1	11667	11667		16.007	0	1	32561			14418	7882	9913	9922	16617	16617					0.1030181425965111
HLITYSPNLI	10	Unmodified	_HLITYSPNLI_					0	0	0			REV__nc|ENSG00000114805|Q4KWH8|PLCH1	REV__nc|ENSG00000114805|Q4KWH8|PLCH1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.8292846679688	2	585.829506	1169.64446	-0.90054	-0.00052756	1.7294	0.0010131	0.82884	0.00048556	585.8305105735789	59.591	0.89731	59.591	59.162	60.06	0					55	35	2	0	0	0	0.86589	1	5211	5211		29.15	1.0681	1	110350	+		14419	29793	9914	9923	16618	16618					0.06642274057185205
HLKAKKRAKK	10	Unmodified	_HLKAKKRAKK_					0	0	0			REV__ENSG00000065183|ENST00000349139|WDR3	REV__ENSG00000065183|ENST00000349139|WDR3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.2469177246094	3	403.275175	1206.80369	3.1798	0.0012823	-2.2967	-0.00092618	0.88318	0.00035616	403.2750701835968	104.71	0.24426	104.75	104.67	104.91	0.039856					7	5	2	0	0	0	0.37624	1	11406	11406		3.6191	1.7321	1	27212	+		14420	16494	9915	9924	16619	16619					0.20856452195835118
HLKEKLIS	8	Unmodified	_HLKEKLIS_					0	0	0		nc|ENSG00000140859|Q9BVG8-4|KIFC3;ENSG00000140859|ENST00000445690|KIFC3;nc|ENSG00000140859|Q9BVG8|KIFC3;nc|ENSG00000140859|Q9BVG8-6|KIFC3	nc|ENSG00000140859|Q9BVG8-4|KIFC3	nc|ENSG00000140859|Q9BVG8-4|KIFC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.3004150390625	2	484.300384	966.586216	0.031781	1.5392E-05	0.2052	9.938E-05	0.23698	0.00011477	484.3002883441307	32.311	0.43161	32.438	32.246	32.677	0.12643					17	9	2	0	0	0	0.91977	1	2263	2263		45.952	0	1	290950			14421	4462	9916	9925	16620	16620					0.10158637202584941
HLKIVYRRF	9	Unmodified	_HLKIVYRRF_					0	0	0		ENSG00000145592|ENST00000274242|RPL37;ENST00000504562.1_1_5:40832608-40835123:-|nuORF;ENST00000507642.5_1_5:40832592-40834660:-|nuORF	ENSG00000145592|ENST00000274242|RPL37	ENSG00000145592|ENST00000274242|RPL37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.2522888183594	3	411.252258	1230.73495	1.4487	0.00059578	-1.0308	-0.0004239	0.41794	0.00017188	411.2517267036376	34.277	1.1753	34.487	34.107	35.283	0.21003					76	28	4	0	0	0	0.55097	4	2523	2523;2534;2548;2560		49.442	18.873	1	1382300			14422	4778	9917	9926	16621;16622;16623;16624	16621					0.1288078789609699
HLKIVYRRF	9	Unmodified	_HLKIVYRRF_					0	0	0		ENSG00000145592|ENST00000274242|RPL37;ENST00000504562.1_1_5:40832608-40835123:-|nuORF;ENST00000507642.5_1_5:40832592-40834660:-|nuORF	ENSG00000145592|ENST00000274242|RPL37	ENSG00000145592|ENST00000274242|RPL37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.2523193359375	3	411.252258	1230.73495	1.1405	0.00046905	-0.93966	-0.00038644	0.20089	8.2616E-05	411.2518036890788	34.264	1.089	34.569	34.2	35.289	0.30495					78	26	4	0	0	0	0.76764	2	2559	2559;2573		34.173	10.795	1	1640900			14423	4778	9917	9926	16625;16626	16625					0.1288078789609699
HLKKQFLYT	9	Unmodified	_HLKKQFLYT_					0	0	0		ENST00000555870.5_1_14:37739712-37970779:+|nuORF	ENST00000555870.5_1_14:37739712-37970779:+|nuORF	ENST00000555870.5_1_14:37739712-37970779:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3431396484375	2	589.340041	1176.66553	2.472	0.0014569	2.3274	0.0013717	4.7995	0.0028285	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.76255	1	10254	10254		35.618	2.8059	1	16740000			14424	13738	9918	9927	16627	16627					0.08426284156712427
HLKKQFLYT	9	Unmodified	_HLKKQFLYT_					0	0	0		ENST00000555870.5_1_14:37739712-37970779:+|nuORF	ENST00000555870.5_1_14:37739712-37970779:+|nuORF	ENST00000555870.5_1_14:37739712-37970779:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.34375	2	589.340041	1176.66553	0.6619	0.00039008	4.392	0.0025884	5.0539	0.0029785	589.3425006699924	91.235	1.3572	91.685	90.611	91.968	0.44958					101	32	4	0	0	0	0.74721	1	10802	10802		37.159	2.9866	1	1778100			14425	13738	9918	9927	16628	16628					0.08426284156712427
HLKLHVPL	8	Unmodified	_HLKLHVPL_					0	0	0		chr19:37551665-37569850|44|10.86|0.58|4.22|+|1|TE_info:L2b,L2b_dup89032,L2,LINE,acceptor,+,37569850,37569909|ZNF540,None|1	chr19:37551665-37569850|44|10.86|0.58|4.22|+|1|TE_info:L2b,L2b_dup89032,L2,LINE,acceptor,+,37569850,37569909|ZNF540,None|1	chr19:37551665-37569850|44|10.86|0.58|4.22|+|1|TE_info:L2b,L2b_dup89032,L2,LINE,acceptor,+,37569850,37569909|ZNF540,None|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8056335449219	2	478.805637	955.596721	-1.7576	-0.00084154	2.8169	0.0013487	1.0593	0.0005072	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.81548	1	2499	2499		20.482	4.0087	1	336090			14426	274	9919	9928	16629	16629					0.11714664647661266
HLKLHVPL	8	Unmodified	_HLKLHVPL_					0	0	0		chr19:37551665-37569850|44|10.86|0.58|4.22|+|1|TE_info:L2b,L2b_dup89032,L2,LINE,acceptor,+,37569850,37569909|ZNF540,None|1	chr19:37551665-37569850|44|10.86|0.58|4.22|+|1|TE_info:L2b,L2b_dup89032,L2,LINE,acceptor,+,37569850,37569909|ZNF540,None|1	chr19:37551665-37569850|44|10.86|0.58|4.22|+|1|TE_info:L2b,L2b_dup89032,L2,LINE,acceptor,+,37569850,37569909|ZNF540,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.80572509765625	2	478.805637	955.596721	-2.669	-0.0012779	3.4642	0.0016587	0.7952	0.00038075	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.86288	1	2891	2891		26.796	1.3459	1	370420			14427	274	9919	9928	16630	16630					0.11714664647661266
HLKQQASILGN	11	Unmodified	_HLKQQASILGN_					0	0	0		ENSG00000122435|ENST00000370141|TRMT13	ENSG00000122435|ENST00000370141|TRMT13	ENSG00000122435|ENST00000370141|TRMT13	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3662109375	2	604.840936	1207.66732	-0.16666	-0.0001008	0.64282	0.0003888	0.47616	0.000288	604.8407661636453	104.66	0.24274	104.66	104.5	104.75	0					7	5	2	0	0	0	0.17244	1	10783	10783		21.686	2.5822	1	63059			14428	3225	9920	9929	16631	16631					0.07179293174658596
HLKSTLAM	8	Unmodified	_HLKSTLAM_					0	0	0		ENSG00000135447|ENST00000257905|PPP1R1A	ENSG00000135447|ENST00000257905|PPP1R1A	ENSG00000135447|ENST00000257905|PPP1R1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7539978027344	2	450.752213	899.489873	0.64847	0.0002923	3.7101	0.0016723	4.3585	0.0019646	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.87922	1	7862	7862		31.955	0	1	162850			14429	4022	9921	9930	16632	16632					0.036107463709754484
HLKTKRILRRN	11	Unmodified	_HLKTKRILRRN_					0	0	0		nc|ENSG00000163714|O15042-3|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9736022949219	3	478.975788	1433.90553	-1.7043	-0.00081634	-1.7797	-0.00085244	-3.484	-0.0016688	478.9749318699197	42.97	1.9218	42.97	41.976	43.898	0					105	47	4	0	0	0	0.81021	1	3068	3068		9.2118	3.513	1	335660			14430	15051	9922	9931	16633	16633					0.2059369854760007
HLKTKRILRRN	11	Unmodified	_HLKTKRILRRN_					0	0	0		nc|ENSG00000163714|O15042-3|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3089904785156	3	478.975788	1433.90553	-0.91416	-0.00043786	-2.4354	-0.0011665	-3.3496	-0.0016044	478.9746832148069	43.078	1.9449	43.084	42.148	44.093	0.0057487					98	52	3	0	0	0	0.81219	1	2940	2940		8.7993	0.39205	1	330000			14431	15051	9922	9931	16634	16634					0.2059369854760007
HLKVKKKKSL	10	Unmodified	_HLKVKKKKSL_					0	0	0		L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|33|1|sense	L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|33|1|sense	L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|33|1|sense	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.9143676757812	2	604.913707	1207.81286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.62	1	111.65	111.15	112.15	0.030388								0	0	0	0.45132	1	12224	12224		9.1829	2.4474	1				14432	14532	9923	9932	16635	16635					0.21726800761507548
HLKYGRIE	8	Unmodified	_HLKYGRIE_					0	0	0			REV__ENSG00000102241|ENST00000218364|HTATSF1	REV__ENSG00000102241|ENST00000218364|HTATSF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.8075866699219	2	508.287808	1014.56106	-1.4222	-0.00072287	-3.0379	-0.0015441	-4.46	-0.002267	508.28440858768215	83.275	0.29994	83.413	83.182	83.482	0.13811					9	6	3	0	0	0	0.4196	1	7995	7995		30.504	8.5438	1	31658	+		14433	17332	9924	9933	16636	16636					0.05436582399988765
HLLKFKSA	8	Unmodified	_HLLKFKSA_					0	0	0			REV__ENSG00000070731|ENST00000225276|ST6GALNAC2	REV__ENSG00000070731|ENST00000225276|ST6GALNAC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2864685058594	2	472.28982	942.565087	0.77592	0.00036646	-3.9935	-0.0018861	-3.2175	-0.0015196	472.2881320540842	102.18	1.2251	102.32	101.72	102.94	0.13523					57	29	3	0	0	0	0.85277	1	10760	10760		25.45	4.9683	1	404720	+		14434	16610	9925	9934	16637	16637					0.09150671893701201
HLLLNHKAM	9	Unmodified	_HLLLNHKAM_					0	0	0			REV__ENSG00000147592|ENST00000276590|LACTB2	REV__ENSG00000147592|ENST00000276590|LACTB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.806640625	2	538.805311	1075.59607	0.058912	3.1742E-05	2.4885	0.0013408	2.5474	0.0013726	538.806607108325	90.57	3.5579	90.787	89.308	92.866	0.21737					211	84	4	0	0	0	0.7932	1	9073	9073		24.203	1.6231	1	874780	+		14435	20077	9926	9935	16638	16638					0.061295019362887615
HLLLPQPTSA	10	Unmodified	_HLLLPQPTSA_					0	0	0			REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|32|2|sense	REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|32|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.806640625	2	538.808574	1075.60259	0.058912	3.1742E-05	-3.5667	-0.0019218	-3.5078	-0.00189	538.806607108325	90.57	3.5579	90.787	89.308	92.866	0.21737					211	84	4	0	0	0	0.86718	1	9061	9061		27.882	0	1	874780	+		14436	29434	9927	9936	16639	16639					0.06781718368665679
HLLLPQPTSA	10	Unmodified	_HLLLPQPTSA_					0	0	0			REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|32|2|sense	REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|32|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.8065185546875	2	538.808574	1075.60259	0.74987	0.00040403	-4.2313	-0.0022799	-3.4814	-0.0018758	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.64457	1	9022	9022		47.657	6.8792	1	840570	+		14437	29434	9927	9936	16640	16640					0.06781718368665679
HLLPVRLALPQ	11	Unmodified	_HLLPVRLALPQ_					0	0	0			REV__ENST00000528694.1_1_11:830476-830866:+|nuORF	REV__ENST00000528694.1_1_11:830476-830866:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.9336242675781	3	419.599435	1255.77648	0.96458	0.00040474	-0.29137	-0.00012226	0.67321	0.00028248	419.5991830900443	24.354	1.3422	23.972	23.576	24.918	-0.38178					72	27	4	0	0	0	0.74405	1	1148	1148		23.378	3.3474	1	726260	+		14438	28251	9928	9937	16641	16641					0.15881923864776581
HLLRILFKN	9	Unmodified	_HLLRILFKN_					0	0	0		nc|ENSG00000145041|Q9Y4B6-3|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;ENSG00000145041|ENST00000684031|DCAF1	nc|ENSG00000145041|Q9Y4B6-3|DCAF1	nc|ENSG00000145041|Q9Y4B6-3|DCAF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.3660888671875	2	577.36385	1152.71315	2.1383	0.0012346	2.9321	0.0016929	5.0703	0.0029274	577.3654203694961	102.01	1.0705	102.33	101.93	103.01	0.32511					73	24	4	0	0	0	0.7932	1	12463	12463		25.45	1.2474	1	1980600			14439	4746	9929	9938	16642	16642					0.1428998314756882
HLLRPAPL	8	Unmodified	_HLLRPAPL_					0	0	0		ENST00000268711.3_1_17:17395027-17395303:+|nuORF	ENST00000268711.3_1_17:17395027-17395303:+|nuORF	ENST00000268711.3_1_17:17395027-17395303:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.7875671386719	2	458.789987	915.565421	-1.7492	-0.00080251	-3.6197	-0.0016607	-5.3689	-0.0024632	458.7883137610394	92.976	2.4972	93.168	92.52	95.017	0.19239					169	59	5	0	0	0	0.87276	1	9411	9411		29.842	0.69198	1	11606000			14440	9541	9930	9939	16643	16643					0.10426091613555855
HLLSIRRPFSK	11	Unmodified	_HLLSIRRPFSK_					0	0	0		ENST00000478241.6_2_12:56224399-56224693:+|nuORF	ENST00000478241.6_2_12:56224399-56224693:+|nuORF	ENST00000478241.6_2_12:56224399-56224693:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9438171386719	3	451.941973	1352.80409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.963	1	54.963	54.463	55.463	0								0	0	0	0.56276	1	4641	4641		15.921	1.227	1				14441	12380	9931	9940	16644	16644					0.1417982712500816
HLLSLLVPI	9	Unmodified	_HLLSLLVPI_					0	0	0			REV__nc|ENSG00000163491|Q6ZWH5-4|NEK10	REV__nc|ENSG00000163491|Q6ZWH5-4|NEK10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	502.813720703125	2	502.828778	1003.643	-1.6058	-0.00080743	-3.9813	-0.0020019	-5.5871	-0.0028093	502.8269687981879	97.233	0.50182	97.435	97.183	97.685	0.20206					11	11	2	0	0	0	0.20789	1	9962	9962		19.36	0	1	80503	+		14442	20922	9932	9941	16645	16645					0.14132684759090353
HLLTKLTR	8	Unmodified	_HLLTKLTR_					0	0	0			REV__nc|ENSG00000175216|Q14008-2|CKAP5	REV__nc|ENSG00000175216|Q14008-2|CKAP5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.3124694824219	2	491.313826	980.613099	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.801	1	19.731	19.231	20.231	-0.069735								0	0	0	0.29631	1	465	465		25.45	1.2474	1		+		14443	22050	9933	9942	16646	16646					0.12201745813752041
HLMFIWIW	8	Unmodified	_HLMFIWIW_					0	0	0		ENST00000262554.6_1_9:94830338-94842342:-|nuORF	ENST00000262554.6_1_9:94830338-94842342:-|nuORF	ENST00000262554.6_1_9:94830338-94842342:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.302001953125	2	573.301873	1144.58919	-1.0633	-0.00060957	0.18113	0.00010384	-0.88213	-0.00050573	573.3019114638097	72.702	0.59371	72.739	72.478	73.072	0.037148					37	21	2	0	0	0	0.94009	1	6943	6943		54.895	3.5591	1	225340			14444	9444	9934	9943	16647	16647					0.022681890557350926
HLNDGPGKTG	10	Unmodified	_HLNDGPGKTG_					0	0	0			REV__ENSG00000164645|ENST00000297203|TEX47	REV__ENSG00000164645|ENST00000297203|TEX47	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.24884033203125	2	498.24888	994.483208	-0.55239	-0.00027523	3.5722	0.0017799	3.0198	0.0015046	498.2510341013194	83.952	3.2585	84.117	82.682	85.941	0.1651					164	75	3	0	0	0	0.8608	1	8127	8127		34.173	5.023	1	123740	+		14445	21099	9935	9944	16648	16648					-0.01425475256030495
HLNLLGGKSRL	11	Unmodified	_HLNLLGGKSRL_					0	0	0		ENST00000566584.5_2_16:57207702-57208599:-|nuORF	ENST00000566584.5_2_16:57207702-57208599:-|nuORF	ENST00000566584.5_2_16:57207702-57208599:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2469177246094	3	403.247173	1206.71969	-0.18602	-7.5014E-05	-0.48244	-0.00019454	-0.66847	-0.00026956	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.76699	1	11380	11380		21.78	5.063	1	12308000			14446	13937	9936	9945	16649	16649					0.12459876308275852
HLNLLGGKSRL	11	Unmodified	_HLNLLGGKSRL_					0	0	0		ENST00000566584.5_2_16:57207702-57208599:-|nuORF	ENST00000566584.5_2_16:57207702-57208599:-|nuORF	ENST00000566584.5_2_16:57207702-57208599:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.24700927734375	3	403.247173	1206.71969	-1.7912	-0.0007223	1.0466	0.00042203	-0.74462	-0.00030027	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.74763	1	11198	11198		20.315	0	1	20673000			14447	13937	9936	9945	16650	16650					0.12459876308275852
HLNNRKPH	8	Unmodified	_HLNNRKPH_					0	0	0			REV__ENST00000358303.8_1_7:129680937-129691088:-|nuORF	REV__ENST00000358303.8_1_7:129680937-129691088:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.27960205078125	2	508.280849	1014.54715	0.029362	1.4924E-05	-1.6558	-0.00084162	-1.6265	-0.0008267	508.2799882081312	26.317	1.2518	26.059	25.682	26.934	-0.2572					83	27	5	0	0	0	0.9159	1	1464	1464		44.531	0.41427	1	2089700	+		14448	25431	9937	9946	16651	16651					0.04045349691557476
HLNRTPKQLA	10	Unmodified	_HLNRTPKQLA_					0	0	0		ENST00000448467.1_1_22:30939341-30940067:+|nuORF	ENST00000448467.1_1_22:30939341-30940067:+|nuORF	ENST00000448467.1_1_22:30939341-30940067:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3438720703125	2	589.343646	1176.67274	0.82336	0.00048524	-2.0045	-0.0011814	-1.1812	-0.00069612	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.86348	1	11552	11552		31.53	1.9791	1	9460500			14449	11858	9938	9947	16652	16652					0.09147016757151505
HLPFGTLK	8	Unmodified	_HLPFGTLK_					0	0	0			REV__ENST00000554269.1_1_15:20362738-20365460:+|nuORF	REV__ENST00000554269.1_1_15:20362738-20365460:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7671203613281	2	456.76872	911.522887	-0.35435	-0.00016185	-2.3484	-0.0010727	-2.7027	-0.0012345	456.76747065497955	16.53	0.35999	16.45	16.299	16.659	-0.080017					24	14	3	0	0	0	0.87479	1	127	127		30.504	1.3541	1	186080	+		14450	28660	9939	9948	16653	16653					0.06358696485347082
HLPFPPIQVVD	11	Unmodified	_HLPFPPIQVVD_					0	0	0		ENST00000602725.5_1_1:32373878-32374037:-|nuORF	ENST00000602725.5_1_1:32373878-32374037:-|nuORF	ENST00000602725.5_1_1:32373878-32374037:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	631.352294921875	2	631.350606	1260.68666	0.42213	0.00026651	-4.4606	-0.0028162	-4.0384	-0.0025497	631.3477367460509	44.308	0.48005	44.357	44.176	44.656	0.048996					18	11	2	0	0	0	0.48529	1	3126	3126		52.937	17.785	1	161350			14451	14411	9940	9949	16654	16654					0.0667424946555002
HLPFPPIQVVD	11	Unmodified	_HLPFPPIQVVD_					0	0	0		ENST00000602725.5_1_1:32373878-32374037:-|nuORF	ENST00000602725.5_1_1:32373878-32374037:-|nuORF	ENST00000602725.5_1_1:32373878-32374037:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	631.350606	1260.68666	-0.93125	-0.00058794	-2.8476	-0.0017978	-3.7789	-0.0023858	631.3486553955072	44.39	0.6023	44.357	44.104	44.706	-0.03347	-0.0042259	0.0010182	NaN	52.937	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74393			14452	14411	9940	9949							0.0667424946555002
HLPFPPIQVVD	11	Unmodified	_HLPFPPIQVVD_					0	0	0		ENST00000602725.5_1_1:32373878-32374037:-|nuORF	ENST00000602725.5_1_1:32373878-32374037:-|nuORF	ENST00000602725.5_1_1:32373878-32374037:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	631.350606	1260.68666	-0.17723	-0.00011189	-4.0805	-0.0025763	-4.2578	-0.0026881	631.348052780341	44.424	0.59116	44.42	44.202	44.793	-0.003624	0.058968	-0.00053866	NaN	52.937	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78037			14453	14411	9940	9949							0.0667424946555002
HLPFPPIQVVD	11	Unmodified	_HLPFPPIQVVD_					0	0	0		ENST00000602725.5_1_1:32373878-32374037:-|nuORF	ENST00000602725.5_1_1:32373878-32374037:-|nuORF	ENST00000602725.5_1_1:32373878-32374037:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	631.350606	1260.68666	1.3416	0.00084704	-5.3056	-0.0033497	-3.964	-0.0025027	631.3467442300274	44.412	0.40703	44.421	44.182	44.589	0.0084534	0.059745	-0.0020856	NaN	52.937	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101680			14454	14411	9940	9949							0.0667424946555002
HLPGLKQS	8	Unmodified	_HLPGLKQS_					0	0	0			REV__ENST00000310574.7_1_2:27434356-27435124:-|nuORF	REV__ENST00000310574.7_1_2:27434356-27435124:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2548828125	2	440.255977	878.497401	-1.4879	-0.00065508	-0.26291	-0.00011575	-1.7509	-0.00077082	440.2558124081508	66.549	0.68278	66.682	66.36	67.042	0.13326					60	29	3	0	0	0	0.85277	1	5922	5922		25.45	2.4077	1	243800	+		14455	24892	9941	9950	16655	16655					0.05329221962904285
HLPGQRSH	8	Unmodified	_HLPGQRSH_					0	0	0		nc|ENSG00000154162|P55289-2|CDH12;ENSG00000154162|ENST00000382254|CDH12	nc|ENSG00000154162|P55289-2|CDH12	nc|ENSG00000154162|P55289-2|CDH12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.24725341796875	2	466.246475	930.478397	-0.046845	-2.1841E-05	3.2507	0.0015156	3.2038	0.0014938	466.24790957253805	55.276	0.58589	55.677	55.405	55.991	0.40101					23	13	2	0	0	0	0.9295	1	5678	5678		55.504	9.5523	1	480590			14456	5257	9942	9951	16656	16656					0.010376853918501183
HLPHAPCPKPQ	11	Unmodified	_HLPHAPCPKPQ_					0	0	0			REV__ENST00000473174.1_2_9:116856172-116859990:-|nuORF	REV__ENST00000473174.1_2_9:116856172-116859990:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.8795166015625	3	408.881725	1223.62335	-2.1156	-0.00086504	-3.1506	-0.0012882	-5.2662	-0.0021533	408.8803002562497	23.885	1.1542	23.885	23.413	24.568	0					112	51	3	0	0	0	0.71207	1	757	757		29.551	1.9068	1	176940	+		14457	27278	9943	9952	16657	16657					0.020479854766790595
HLPKLPPKTY	10	Unmodified	_HLPKLPPKTY_					0	0	0		nc|ENSG00000100485|Q07890-2|SOS2;ENSG00000100485|ENST00000216373|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.35791015625	2	597.355691	1192.69683	0.89295	0.00053341	3.2215	0.0019244	4.1144	0.0024578	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.86718	1	10413	10413		27.882	0	1	2674200			14458	1843	9944	9953	16658	16658					0.10818857190815834
HLPLETILGI	10	Unmodified	_HLPLETILGI_					0	0	0			REV__ENSG00000170881|ENST00000303545|RNF139	REV__ENSG00000170881|ENST00000303545|RNF139	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3327026367188	2	553.334424	1104.6543	-1.4413	-0.00079751	-2.1828	-0.0012078	-3.6241	-0.0020053	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.85939	1	9933	9933		23.042	1.0826	1	2490200	+		14459	21693	9945	9954	16659	16659					0.10615462062582992
HLPLLSFLP	9	Unmodified	_HLPLLSFLP_					0	0	0		ENST00000592414.1_1_19:3055403-3056603:-|nuORF	ENST00000592414.1_1_19:3055403-3056603:-|nuORF	ENST00000592414.1_1_19:3055403-3056603:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8021240234375	2	518.813128	1035.6117	-0.6757	-0.00035056	-1.8663	-0.00096825	-2.542	-0.0013188	518.8122887128435	86.586	0.65049	87.04	86.735	87.385	0.45429					25	15	2	0	0	0	0.20789	1	10211	10211		37.028	8.7742	1	453960			14460	14287	9946	9955	16660	16660					0.09532111724979586
HLPPGCDS	8	Unmodified	_HLPPGCDS_					0	0	0			REV__chr13:99496217-99496364|36|12.19|0.26|5.53|-|1|TE_info:MER51A,MER51A_dup708,ERV1,LTR,donor,-,99496364,99496489|LINC01232,None|2	REV__chr13:99496217-99496364|36|12.19|0.26|5.53|-|1|TE_info:MER51A,MER51A_dup708,ERV1,LTR,donor,-,99496364,99496489|LINC01232,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1837463378906	2	413.18162	824.348688	1.7261	0.00071319	1.9929	0.00082343	3.719	0.0015366	413.182822541021	99.146	0.82581	99.509	99.135	99.961	0.36292					79	20	5	0	0	0	0.87807	1	12026	12026		31.579	3.3246	1	11472000	+		14461	15582	9947	9956	16661	16661					-0.07051252002304409
HLPPPPPKL	9	Unmodified	_HLPPPPPKL_					0	0	0			REV__ENST00000557815.1_1_15:70342626-70342737:-|nuORF	REV__ENST00000557815.1_1_15:70342626-70342737:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.3063659667969	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.707	1	52.747	52.247	53.247	0.040592								0	0	0	0.33301	1	4268	4268		19.36	0	1		+		14462	28722	9948	9957	16662	16662					0.0988724492780193
HLPRVVHLF	9	Unmodified	_HLPRVVHLF_					0	0	0		ENSG00000278870|ENST00000623849|OR51G1	ENSG00000278870|ENST00000623849|OR51G1	ENSG00000278870|ENST00000623849|OR51G1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	559.3363037109375	2	559.335093	1116.65563	-0.79115	-0.00044252	2.6357	0.0014742	1.8445	0.0010317	559.3365046411202	31.331	0.55992	31.349	31.121	31.681	0.018362					22	12	2	0	0	0	0.44444	1	1681	1681		54.765	19.613	1	85898			14463	9037	9949	9958	16663	16663					0.10197140941977523
HLQATEIEKAR	11	Unmodified	_HLQATEIEKAR_					0	0	0		ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.2555847167969	3	432.573726	1294.69935	2.4109	0.0010429	-1.1708	-0.00050647	1.2401	0.00053644	432.57258981095197	107.09	0.53903	107.12	106.76	107.3	0.035622					19	12	2	0	0	0	0.1747	1	11747	11747		34.087	6.4426	1	119260			14464	4987	9950	9959	16664	16664					0.0637866085778569
HLQCSELWTQ	10	Unmodified	_HLQCSELWTQ_					0	0	0		ENST00000319283.7_1_3:39140300-39140927:-|nuORF	ENST00000319283.7_1_3:39140300-39140927:-|nuORF	ENST00000319283.7_1_3:39140300-39140927:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.2255859375	3	415.529129	1243.56556	1.6407	0.00068177	2.394	0.00099477	4.0347	0.0016765	415.5302676954773	27.16	0.47353	26.819	26.593	27.067	-0.34035					16	10	2	0	0	0	0.37624	1	1532	1532		13.508	0	1	52525			14465	10017	9951	9960	16665	16665					-0.04648321239415054
HLQHGRGH	8	Unmodified	_HLQHGRGH_					0	0	0		ENST00000562532.2_1_20:30584341-30584887:+|nuORF	ENST00000562532.2_1_20:30584341-30584887:+|nuORF	ENST00000562532.2_1_20:30584341-30584887:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	471.2420654296875	2	471.244267	940.47398	-1.1193	-0.00052749	0.21457	0.00010112	-0.90477	-0.00042637	471.2441988506581	85.918	3.203	85.918	84.395	87.598	0					120	73	3	0	0	0	0.88915	1	8160	8160		35.201	10.697	1	202290			14466	13850	9952	9961	16666	16666					0.0013622096895460345
HLQTHTIPLS	10	Unmodified	_HLQTHTIPLS_					0	0	0			REV__ENSG00000178279|ENST00000312693|TNP2	REV__ENSG00000178279|ENST00000312693|TNP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.2254638671875	2	573.81693	1145.61931	-0.52132	-0.00029914	0.66644	0.00038241	0.14511	8.3269E-05	573.8174304303305	62.576	0.48744	62.604	62.359	62.846	0.028133					39	22	2	0	0	0	0.37624	1	5860	5860		10.265	4.3441	1	153160	+		14467	22271	9953	9962	16667	16667					0.05232219254617121
HLQTSKRIISL	11	Unmodified	_HLQTSKRIISL_					0	0	0			REV__ENST00000487832.6_1_6:116895272-116901503:+|nuORF	REV__ENST00000487832.6_1_6:116895272-116901503:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3917236328125	2	648.393336	1294.77212	-0.0023386	-1.5163E-06	-0.87161	-0.00056515	-0.87395	-0.00056666	648.3926215212863	106.57	0.85555	106.54	106.01	106.87	-0.025146					71	19	4	0	0	0	0.69995	1	11531	11531		31.53	3.4483	1	19156000	+		14468	27579	9954	9963	16668	16668					0.13652414651232903
HLQTSKRIISL	11	Unmodified	_HLQTSKRIISL_					0	0	0			REV__ENST00000487832.6_1_6:116895272-116901503:+|nuORF	REV__ENST00000487832.6_1_6:116895272-116901503:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3930053710938	2	648.393336	1294.77212	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.92	1	113.89	113.39	114.39	-0.024452								0	0	0	0.56276	1	12612	12612		32.812	21.947	1		+		14469	27579	9954	9963	16669	16669					0.13652414651232903
HLRGTHVKK	9	Unmodified	_HLRGTHVKK_					0	0	0			REV__ENST00000420509.1_1_2:206951001-206951199:+|nuORF	REV__ENST00000420509.1_1_2:206951001-206951199:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.32568359375	2	538.327799	1074.64105	-1.4902	-0.00080221	0.37298	0.00020079	-1.1172	-0.00060142	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12473	12473		25.45	3.7478	1	4041000	+		14470	26487	9955	9964	16670	16670					0.10671068793840277
HLRGVQLH	8	Unmodified	_HLRGVQLH_					0	0	0			REV__ENST00000583167.5_1_17:45893705-45894118:-|nuORF	REV__ENST00000583167.5_1_17:45893705-45894118:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2809143066406	2	480.280318	958.546083	2.0773	0.00099766	-0.80311	-0.00038572	1.2741	0.00061195	480.27979970211794	99.254	1.495	99.616	99.254	100.75	0.36136					97	37	4	0	0	0	0.92176	2	11950	11950;11986		46.766	2.2354	1	8902700	+		14471	29066	9956	9965	16671;16672	16671					0.06515135322649712
HLRHRKAFV	9	Unmodified	_HLRHRKAFV_					0	0	0			REV__ENSG00000110455|ENST00000263776|ACCS	REV__ENSG00000110455|ENST00000263776|ACCS	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3538818359375	2	582.349066	1162.68358	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.43	1	116.4	115.9	116.9	-0.02433								0	0	0	0.31828	1	12893	12893		24.203	6.8378	1		+		14472	17818	9957	9966	16673	16673					0.10874463922073119
HLRKPQDP	8	Unmodified	_HLRKPQDP_					0	0	0			REV__nc|ENSG00000165359|Q5JSJ4-4|INTS6L	REV__nc|ENSG00000165359|Q5JSJ4-4|INTS6L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.779296875	2	495.777608	989.540663	-0.29638	-0.00014694	3.4404	0.0017057	3.144	0.0015587	495.77898062443245	77.704	0.61508	78.272	77.968	78.583	0.56836					31	14	3	0	0	0	0.87479	1	8881	8881		30.504	0	1	783610	+		14473	21175	9958	9967	16674	16674					0.04547411740179541
HLRKYVLRHHL	11	Unmodified	_HLRKYVLRHHL_					0	0	0			REV__ENSG00000109929|ENST00000264027|SC5D	REV__ENSG00000109929|ENST00000264027|SC5D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.3000183105469	3	491.29675	1470.86842	2.8436	0.001397	1.9455	0.00095581	4.789	0.0023528	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.84494	1	13271	13271		6.3209	0.6221	1	3274400	+		14474	17783	9959	9968	16675	16675					0.15182027001833376
HLRPLLLLF	9	Unmodified	_HLRPLLLLF_					0	0	0			REV__nc|ENSG00000179869|Q86UQ4|ABCA13	REV__nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.3644409179688	2	561.363319	1120.71209	-0.90534	-0.00050823	1.7899	0.0010048	0.88454	0.00049655	561.3641911256115	45.987	0.8561	45.968	45.577	46.433	-0.018581					49	20	3	0	0	0	0.7932	1	3692	3692		12.959	0	1	139730	+		14475	22360	9960	9969	16676	16676					0.1565576877865169
HLRPPIPP	8	Unmodified	_HLRPPIPP_					0	0	0			REV__ENST00000422590.6_1_1:231829618-232144897:+|nuORF	REV__ENST00000422590.6_1_1:231829618-232144897:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.7830810546875	2	463.782162	925.549771	0.11522	5.3435E-05	1.0134	0.00046999	1.1286	0.00052343	463.78248709174954	38.993	0.65287	38.963	38.628	39.281	-0.03027					24	14	2	0	0	0	0.86791	1	2680	2680		28.254	1.4582	1	100130	+		14476	20867	9961	9970	16677	16677					0.08401805096514181
HLRQPGIH	8	Unmodified	_HLRQPGIH_					0	0	0		nc|ENSG00000163950|Q14493-2|SLBP;ENSG00000163950|ENST00000489418|SLBP	nc|ENSG00000163950|Q14493-2|SLBP	nc|ENSG00000163950|Q14493-2|SLBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2751770019531	2	479.272493	956.530432	0.41724	0.00019997	0.49768	0.00023852	0.91492	0.0004385	479.2725825967004	97.562	0.98976	97.953	97.682	98.672	0.39065					61	23	5	0	0	0	0.87276	1	11752	11752		29.842	1.5873	1	1576600			14477	5891	9962	9971	16678	16678					0.05042848805612721
HLRYRILLHVL	11	Unmodified	_HLRYRILLHVL_					0	0	0			REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.30303955078125	3	478.301501	1431.88267	-0.10097	-4.8294E-05	3.0153	0.0014422	2.9144	0.0013939	478.302730378592	67.138	1.0775	67.155	66.828	67.905	0.016205					111	46	4	0	0	0	0.7896	1	6307	6307		13.508	3.8618	1	279890	+		14478	23273	9963	9972	16679	16679					0.18400679430124
HLRYRILLHVL	11	Unmodified	_HLRYRILLHVL_					0	0	0			REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.30218505859375	3	478.301501	1431.88267	-0.48825	-0.00023353	3.4745	0.0016619	2.9863	0.0014283	478.30300632886104	67.214	1.2093	67.178	66.747	67.957	-0.035698					104	51	3	0	0	0	0.80813	2	6458	6458;6474		9.6461	3.3253	1	289200	+		14479	23273	9963	9972	16680;16681	16680					0.18400679430124
HLRYRILLHVL	11	Unmodified	_HLRYRILLHVL_					0	0	0			REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.3025207519531	3	478.301501	1431.88267	-0.88095	-0.00042136	3.5933	0.0017187	2.7123	0.0012973	478.30312855267334	66.875	1.0299	67.008	66.517	67.547	0.13326					107	42	3	0	0	0	0.75906	2	5972	5923;5972		20.03	5.3368	1	324080	+		14480	23273	9963	9972	16682;16683	16683					0.18400679430124
HLRYRILLHVL	11	Unmodified	_HLRYRILLHVL_					0	0	0			REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.3016357421875	3	478.301501	1431.88267	-0.94284	-0.00045096	3.7711	0.0018037	2.8283	0.0013528	478.63764981735454	66.982	1.088	67.034	66.688	67.776	0.052376					96	41	3	0	0	0	0.74405	1	5969	5969		23.378	9.87	1	269070	+		14481	23273	9963	9972	16684	16684					0.18400679430124
HLSFVGECQSK	11	Unmodified	_HLSFVGECQSK_					0	0	0			REV__ENST00000289175.10_2_2:238672670-238672859:+|nuORF	REV__ENST00000289175.10_2_2:238672670-238672859:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76690673828125	3	412.201012	1233.58121	-0.81878	-0.0003375	-0.93273	-0.00038447	-1.7515	-0.00072197	412.20052770935956	48.21	0.62566	48.185	47.905	48.53	-0.025112					22	14	2	0	0	0	0.17648	1	4106	4106		21.032	0	1	140410	+		14482	24652	9964	9973	16685	16685					-0.02624034722362012
HLSILQSLVP	10	Unmodified	_HLSILQSLVP_					0	0	0		ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF	ENST00000596658.1_1_19:50433558-50434160:+|nuORF	ENST00000596658.1_1_19:50433558-50434160:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8297119140625	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.86218	1	8845	8845		32.812	2.3088	1	1844500			14483	11504	9965	9974	16686	16686					0.10094577919812764
HLSKLLLVHGH	11	Unmodified	_HLSKLLLVHGH_					0	0	0		nc|ENSG00000145246|Q9P241-2|ATP10D;ENSG00000145246|ENST00000273859|ATP10D	nc|ENSG00000145246|Q9P241-2|ATP10D	nc|ENSG00000145246|Q9P241-2|ATP10D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3826293945312	2	627.377489	1252.74043	6.5882	0.0041333	0.97441	0.00061132	7.5626	0.0047446	627.3778538382699	111.82	0.62036	111.85	111.67	112.29	0.032707					64	21	4	0	0	0	0.75921	1	13555	13555		19.997	3.2794	1	10130000			14484	4759	9966	9975	16687	16687					0.12416466687955108
HLSLIVSAK	9	Unmodified	_HLSLIVSAK_					0	0	0			REV__ENST00000482108.1_2_7:94295379-94295562:+|nuORF	REV__ENST00000482108.1_2_7:94295379-94295562:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.30133056640625	2	484.300384	966.586216	0.36289	0.00017575	-0.055846	-2.7046E-05	0.30704	0.0001487	484.3001830226672	32.264	0.51573	32.371	32.146	32.662	0.10707					23	11	3	0	0	0	0.44421	1	2255	2255		54.776	3.4409	1	299170	+		14485	27459	9967	9976	16688	16688					0.10158637202573573
HLSLLKRLG	9	Unmodified	_HLSLLKRLG_					0	0	0			REV__nc|ENSG00000198739|Q86VH5-2|LRRTM3	REV__nc|ENSG00000198739|Q86VH5-2|LRRTM3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8112182617188	2	518.834926	1035.6553	2.0139	0.0010449	2.1573	0.0011193	4.1711	0.0021641	518.835870739171	99.976	0.22941	100.32	100.15	100.38	0.34591					7	5	2	0	0	0	0.20789	1	12126	12126		44.117	5.3107	1	123890	+		14486	23370	9968	9977	16689	16689					0.13889721222130902
HLSRTRRF	8	Unmodified	_HLSRTRRF_					0	0	0			REV__ENSG00000008130|ENST00000341426|NADK	REV__ENSG00000008130|ENST00000341426|NADK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.3306274414062	2	536.809774	1071.60499	-0.49503	-0.00026574	2.446	0.001313	1.9509	0.0010473	536.8111359800475	31.925	0.34191	32.051	31.818	32.16	0.12643					12	7	2	0	0	0	0.4196	1	2164	2164		18.324	0	1	67978	+		14487	16129	9969	9978	16690	16690					0.07205611616973329
HLSRTVNGYDT	11	Unmodified	_HLSRTVNGYDT_					0	0	0		ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	631.807373046875	2	631.809833	1261.60511	-1.0784	-0.00068134	-2.218	-0.0014013	-3.2964	-0.0020827	631.8084300845459	30.862	0.39671	30.862	30.641	31.038	0					18	12	2	0	0	0	0.62614	1	1440	1440		41.427	9.7923	1	64418			14488	4370	9970	9979	16691	16691					-0.015224779643403963
HLSRTVNGYDT	11	Unmodified	_HLSRTVNGYDT_					0	0	0		ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	631.809833	1261.60511	0.15	9.4772E-05	-2.9204	-0.0018452	-2.7704	-0.0017504	631.8080174037705	30.727	0.42622	30.752	30.58	31.006	0.025013	-0.096014	0.00016269	NaN	41.427	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31722			14489	4370	9970	9979							-0.015224779643403963
HLSRTVNGYDT	11	Unmodified	_HLSRTVNGYDT_					0	0	0		ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	631.809833	1261.60511	-0.21418	-0.00013532	-2.7511	-0.0017382	-2.9652	-0.0018735	631.8081718479416	30.832	0.5972	30.785	30.497	31.094	-0.047062	-0.062915	0.00037672	NaN	41.427	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30988			14490	4370	9970	9979							-0.015224779643403963
HLSRTVNGYDT	11	Unmodified	_HLSRTVNGYDT_					0	0	0		ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	631.809833	1261.60511	0.5845	0.0003693	-4.1157	-0.0026003	-3.5312	-0.002231	631.8075587733952	30.798	0.46344	30.787	30.585	31.049	-0.010656	-0.060189	-0.0013476	NaN	41.427	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49835			14491	4370	9970	9979							-0.015224779643403963
HLSRTVNGYDT	11	Unmodified	_HLSRTVNGYDT_					0	0	0		ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	631.809833	1261.60511	-0.80041	-0.00050571	-2.5133	-0.0015879	-3.3137	-0.0020936	631.8086067747239	30.902	0.48717	30.982	30.722	31.209	0.079834	0.1343	0.00067716	NaN	41.427	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111210			14492	4370	9970	9979							-0.015224779643403963
HLSRTVNGYDT	11	Unmodified	_HLSRTVNGYDT_					0	0	0		ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	ENSG00000139438|ENST00000538780|FAM222A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	631.809833	1261.60511	1.2274	0.00077549	-5.2177	-0.0032966	-3.9903	-0.0025211	631.8067139736538	30.914	0.52092	30.918	30.71	31.23	0.0037212	0.070031	-0.0027401	NaN	41.427	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136950			14493	4370	9970	9979							-0.015224779643403963
HLSSPRKW	8	Unmodified	_HLSSPRKW_					0	0	0			REV__ENSG00000102763|ENST00000379310|VWA8	REV__ENSG00000102763|ENST00000379310|VWA8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.35394287109375	2	505.780151	1009.54575	-0.31346	-0.00015854	-2.8844	-0.0014589	-3.1979	-0.0016174	505.7792210696296	52.543	0.74635	52.967	52.638	53.384	0.42348					39	17	3	0	0	0	0.4196	1	5258	5258		30.504	3.7075	1	376480	+		14494	17353	9971	9980	16692	16692					0.04135715602808432
HLTAVAIIKR	10	Unmodified	_HLTAVAIIKR_					0	0	0			REV__ENSG00000204406|ENST00000642680|MBD5	REV__ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3623657226562	2	561.361308	1120.70806	-0.061787	-3.4685E-05	3.5032	0.0019666	3.4414	0.0019319	561.3631099932169	44.376	1.0511	44.826	44.16	45.211	0.45024					79	25	4	0	0	0	0.85251	1	4005	4005		19.997	0	1	3514300	+		14495	23489	9972	9981	16693	16693					0.15253679284933241
HLTAVSLAP	9	Unmodified	_HLTAVSLAP_					0	0	0			REV__ENST00000443945.6_1_13:47127426-47279607:+|nuORF;REV__nc|ENSG00000136141|Q9Y2L9-2|LRCH1	REV__ENST00000443945.6_1_13:47127426-47279607:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.76318359375	2	454.763635	907.512717	-1.6468	-0.00074888	0.88455	0.00040226	-0.76221	-0.00034662	454.7640048592381	47.693	0.81293	48.163	47.855	48.668	0.46941					53	20	4	0	0	0	0.69914	1	4579	4579		40.573	0	1	5728200	+		14496	26779;29868	9973	9982	16694	16694					0.05526088760097991
HLTEPLDEAL	10	Unmodified	_HLTEPLDEAL_					0	0	0		ENSG00000235961|ENST00000421798|PNMA6A	ENSG00000235961|ENST00000421798|PNMA6A	ENSG00000235961|ENST00000421798|PNMA6A	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.7818603515625	2	569.292953	1136.57135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.963	1	64.963	64.463	65.463	0								0	0	0	0.45132	1	5728	5728		23.042	1.0826	1				14497	8752	9974	9983	16695	16695					0.008531005438953798
HLTITKLW	8	Unmodified	_HLTITKLW_					0	0	0			REV__ENST00000467808.5_1_X:100879846-100879927:+|nuORF	REV__ENST00000467808.5_1_X:100879846-100879927:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.2997131347656	2	506.302927	1010.5913	-0.057035	-2.8877E-05	-3.8274	-0.0019378	-3.8844	-0.0019667	506.3009364840715	96.693	1.2093	96.756	96.133	97.342	0.062225					68	27	3	0	0	0	0.86288	1	10128	10128		26.796	2.2769	1	463280	+		14498	27167	9975	9984	16696	16696					0.0864294106518173
HLTKLVIH	8	Unmodified	_HLTKLVIH_					0	0	0		ENSG00000171492|ENST00000337338|LRRC8D	ENSG00000171492|ENST00000337338|LRRC8D	ENSG00000171492|ENST00000337338|LRRC8D	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.2796325683594	2	480.803094	959.591636	-0.5453	-0.00026218	-3.6099	-0.0017357	-4.1552	-0.0019978	480.8012162028128	99.152	1.8857	99.2	98.677	100.56	0.047523					62	43	2	0	0	0	0.4196	1	10694	10694		52.299	20.344	1	247930			14499	6672	9976	9985	16697	16697					0.1102236078503438
HLTLDGLPPLR	11	Unmodified	_HLTLDGLPPLR_					0	0	0		ENSG00000160813|ENST00000292330|PPP1R35	ENSG00000160813|ENST00000292330|PPP1R35	ENSG00000160813|ENST00000292330|PPP1R35	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.2442626953125	3	411.243429	1230.70846	2.5653	0.001055	-1.8951	-0.00077935	0.67023	0.00027563	411.2424876891329	102.75	0.89561	102.98	102.74	103.63	0.22556					34	27	2	0	0	0	0.71207	1	12503	12503		29.551	5.3189	1	2184900			14500	5609	9977	9986	16698	16698					0.10233054214131698
HLTPASDGLLS	11	Unmodified	_HLTPASDGLLS_					0	0	0			REV__nc|ENSG00000173744|P52594-2|AGFG1	REV__nc|ENSG00000173744|P52594-2|AGFG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.7919311523438	2	555.793121	1109.57169	0.90582	0.00050345	-1.2022	-0.00066819	-0.29641	-0.00016474	555.792253317415	27.721	0.56341	27.697	27.347	27.911	-0.023558					29	13	3	0	0	0	0.69995	1	1275	1275		31.53	5.9558	1	48485	+		14501	21949	9978	9987	16699	16699					0.021285202637727707
HLTPDDAAQ	9	Unmodified	_HLTPDDAAQ_					0	0	0		nc|ENSG00000169635|Q96JB3-2|HIC2;ENSG00000169635|ENST00000407464|HIC2	nc|ENSG00000169635|Q96JB3-2|HIC2	nc|ENSG00000169635|Q96JB3-2|HIC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.30133056640625	2	484.227613	966.440674	0.26703	0.0001293	-0.38466	-0.00018627	-0.11764	-5.6964E-05	484.2272733149992	32.03	0.60071	32.137	31.888	32.488	0.10707					22	13	2	0	0	0	0.20789	1	2255	2255		56.721	6.6965	1	308100			14502	6512	9979	9988	16700	16700					-0.04388870384286747
HLTPEEKS	8	Unmodified	_HLTPEEKS_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7400817871094	2	470.740357	939.46616	-0.18565	-8.7395E-05	0.40991	0.00019296	0.22426	0.00010557	470.7403415454504	18.472	0.53098	18.393	18.138	18.669	-0.078943					39	20	3	0	0	0	0.20947	2	321	316;321		108.09	39.603	1	226870			14503	8826	9980	9989	16701;16702	16702					-0.005993958618546458
HLTPEEKS	8	Unmodified	_HLTPEEKS_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	470.740357	939.46616	0.98775	0.00046497	-0.68334	-0.00032168	0.30441	0.0001433	470.73985743032955	18.198	0.32363	18.273	18.094	18.418	0.075441	-0.092018	-0.00076689	NaN	108.09	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	198060			14504	8826	9980	9989							-0.005993958618546458
HLTPEEKSA	9	Unmodified	_HLTPEEKSA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.2587890625	2	506.258914	1010.50327	1.0379	0.00052544	-0.92649	-0.00046904	0.11141	5.6401E-05	506.2583142247228	19.481	0.69756	19.554	19.295	19.992	0.073465					64	24	4	0	0	0	6.1523E-05	5	408	386;393;400;408;414		148.04	60.289	1	424400			14505	8826	9981	9990	16703;16704;16705;16706;16707	16706					-0.0015572431609598425
HLTPEEKSA	9	Unmodified	_HLTPEEKSA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.2586975097656	2	506.258914	1010.50327	-0.17016	-8.6145E-05	0.22992	0.0001164	0.05976	3.0254E-05	506.2589198975556	19.809	0.87017	19.739	19.472	20.343	-0.069735					72	29	4	0	0	0	2.7574E-05	5	467	459;467;475;483;490		153.04	86.607	1	500210			14506	8826	9981	9990	16708;16709;16710;16711;16712	16709					-0.0015572431609598425
HLTPEEKSA	9	Unmodified	_HLTPEEKSA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.25872802734375	2	506.258914	1010.50327	-0.11428	-5.7853E-05	0.089048	4.5081E-05	-0.025228	-1.2772E-05	506.25882550193137	19.829	0.75196	19.759	19.496	20.248	-0.070013					79	31	4	0	0	0	0.0030376	4	455	455;462;467;473		139.97	50.144	1	499040			14507	8826	9981	9990	16713;16714;16715;16716	16713					-0.0015572431609598425
HLTPEEKSAVT	11	Unmodified	_HLTPEEKSAVT_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	606.3159790039062	2	606.31696	1210.61937	0.046398	2.8132E-05	0.074267	4.503E-05	0.12067	7.3162E-05	606.3168793445461	27.969	0.88367	28.005	27.696	28.579	0.03607					67	30	3	0	0	0	0.17527	4	1286	1286;1293;1301;1315		82.75	31.293	1	227170			14508	8826	9982	9991	16717;16718;16719;16720	16717					0.02248174463943542
HLTPEEKSAVT	11	Unmodified	_HLTPEEKSAVT_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3167114257812	2	606.31696	1210.61937	0.10766	6.5276E-05	-0.019045	-1.1547E-05	0.088616	5.3729E-05	606.316776614423	27.846	0.87695	27.807	27.473	28.35	-0.038525					50	19	4	0	0	0	0.0014026	3	1356	1346;1356;1364		112.3	43.449	1	246950			14509	8826	9982	9991	16721;16722;16723	16722					0.02248174463943542
HLTPEEKSAVT	11	Unmodified	_HLTPEEKSAVT_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.316650390625	2	606.31696	1210.61937	-0.44239	-0.00026823	0.38245	0.00023189	-0.059942	-3.6344E-05	606.317074374539	28.023	0.96426	28	27.649	28.613	-0.023556					57	23	4	0	0	0	0.080004	3	1309	1302;1309;1317		89.029	32.595	1	273120			14510	8826	9982	9991	16724;16725;16726	16725					0.02248174463943542
HLTSTIAPPSS	11	Unmodified	_HLTSTIAPPSS_					0	0	0			REV__nc|ENSG00000169894|Q02505-4|MUC3A;REV__ENSG00000169894|ENST00000379458|MUC3A	REV__nc|ENSG00000169894|Q02505-4|MUC3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.7921142578125	2	555.793121	1109.57169	-0.3369	-0.00018724	-0.33079	-0.00018385	-0.66768	-0.00037109	555.7928836595105	27.527	0.54612	27.567	27.33	27.876	0.040833					29	17	2	0	0	0	0.63176	1	1241	1241		40.778	0.20554	1	52362	+		14511	30020;21613	9983	9992	16727	16727					0.021285202637500333
HLVATVTVK	9	Unmodified	_HLVATVTVK_					0	0	0		ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.3006896972656	2	484.300384	966.586216	0.031781	1.5392E-05	0.2052	9.938E-05	0.23698	0.00011477	484.3002883441307	32.311	0.43161	32.438	32.246	32.677	0.12643					17	9	2	0	0	0	0.33718	1	2253	2253		62.107	16.155	1	290950			14512	3770	9984	9993	16728	16728					0.10158637202584941
HLVATVTVK	9	Unmodified	_HLVATVTVK_					0	0	0		ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.3005065917969	2	484.300384	966.586216	0.36289	0.00017575	-0.055846	-2.7046E-05	0.30704	0.0001487	484.3001830226672	32.264	0.51573	32.371	32.146	32.662	0.10707					23	11	3	0	0	0	0.38563	1	2264	2264		58.782	10.866	1	299170			14513	3770	9984	9993	16729	16729					0.10158637202584941
HLVEFHVSQ	9	Unmodified	_HLVEFHVSQ_					0	0	0			REV__ENST00000524260.1_1_8:93972764-93977317:-|nuORF	REV__ENST00000524260.1_1_8:93972764-93977317:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.2826538085938	2	548.282723	1094.55089	-1.4657	-0.00080363	-1.6547	-0.00090726	-3.1204	-0.0017109	548.281610390018	34.409	0.47747	34.409	34.138	34.615	0					16	11	2	0	0	0	0.69624	1	1830	1830		40.778	3.6191	1	58850	+		14514	28159	9985	9994	16730	16730					0.00739974674752375
HLVELDLTGN	10	Unmodified	_HLVELDLTGN_					0	0	0		nc|ENSG00000142405|P59046-5|NLRP12;nc|ENSG00000142405|P59046-4|NLRP12;nc|ENSG00000142405|P59046-3|NLRP12;nc|ENSG00000142405|P59046-6|NLRP12;nc|ENSG00000142405|P59046-2|NLRP12;ENSG00000142405|ENST00000324134|NLRP12;nc|ENSG00000142405|P59046-7|NLRP12	nc|ENSG00000142405|P59046-5|NLRP12	nc|ENSG00000142405|P59046-5|NLRP12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.7938232421875	2	555.793121	1109.57169	-0.3369	-0.00018724	-0.33079	-0.00018385	-0.66768	-0.00037109	555.7928836595105	27.527	0.54612	27.567	27.33	27.876	0.040833					29	17	2	0	0	0	0.67571	1	1248	1248		45.972	6.7194	1	52362			14515	4561	9986	9995	16731	16731					0.021285202637500333
HLVGVPKPGVP	11	Unmodified	_HLVGVPKPGVP_					0	0	0		chr2:100104518-100104668|35|26.0|0.4|6.01|-|ENST00000672269|AFF3,AFF3;ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3;chr2:100104518-100105335|26|10.5|0.32|5.02|-|ENST00000673328|AFF3,AFF3;ENST00000498090.1_1_2:100623057-100623988:-|nuORF	chr2:100104518-100104668|35|26.0|0.4|6.01|-|ENST00000672269|AFF3,AFF3	chr2:100104518-100104668|35|26.0|0.4|6.01|-|ENST00000672269|AFF3,AFF3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3319091796875	2	550.334759	1098.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.81	1	116.73	116.23	117.23	-0.082458								0	0	0	0.56276	1	12556	12556		23.042	5.6775	1				14516	302	9987	9996	16732	16732					0.10958301502273571
HLVKCGKLK	9	Unmodified	_HLVKCGKLK_					0	0	0			REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3174438476562	2	513.318054	1024.62156	-1.5202	-0.00078036	-1.5551	-0.00079825	-3.0753	-0.0015786	513.3171098240366	43.168	1.3566	43.168	42.754	44.111	0					83	32	4	0	0	0	0.7932	1	3126	3126		17.365	0	1	698430	+		14517	15561	9988	9997	16733	16733					0.11022976458730227
HLVLNQRKLS	10	Unmodified	_HLVLNQRKLS_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.36669921875	2	604.367121	1206.71969	0.90473	0.00054679	-2.0534	-0.001241	-1.1487	-0.00069423	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.86218	1	11328	11328		32.812	5.7651	1	105740000			14518	2784	9989	9998	16734	16734					0.12459876308275852
HLVLRMTL	8	Unmodified	_HLVLRMTL_					0	0	0			REV__ENST00000454784.8_2_12:40959567-40961472:+|nuORF	REV__ENST00000454784.8_2_12:40959567-40961472:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7983703613281	2	491.796955	981.579357	-0.78467	-0.0003859	-1.9949	-0.00098111	-2.7796	-0.001367	491.7961077186052	63.812	0.83656	63.842	63.506	64.343	0.030247					49	34	2	0	0	0	0.84341	1	5658	5658		24.203	0	1	86161	+		14519	26931	9990	9999	16735	16735					0.08783001050358052
HLVLTAVDGGE	11	Unmodified	_HLVLTAVDGGE_					0	0	0		nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3;ENSG00000262209|ENST00000576222|PCDHGB3	nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.7932739257812	2	555.793121	1109.57169	0.90582	0.00050345	-1.2022	-0.00066819	-0.29641	-0.00016474	555.792253317415	27.721	0.56341	27.697	27.347	27.911	-0.023558					29	13	3	0	0	0	0.53495	1	1284	1284		49.442	3.4693	1	48485			14520	8932	9991	10000	16736	16736					0.021285202637500333
HLVLTAVDGGE	11	Unmodified	_HLVLTAVDGGE_					0	0	0		nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3;ENSG00000262209|ENST00000576222|PCDHGB3	nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	555.793121	1109.57169	-1.526	-0.00084811	1.2382	0.00068818	-0.28775	-0.00015993	555.7937267281211	27.516	0.47497	27.516	27.327	27.802	0	-0.033251	0.0019487	NaN	49.442	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43832			14521	8932	9991	10000							0.021285202637500333
HLVLWVSPR	9	Unmodified	_HLVLWVSPR_					0	0	0		ENST00000425898.2_1_17:79514693-79514765:-|nuORF	ENST00000425898.2_1_17:79514693-79514765:-|nuORF	ENST00000425898.2_1_17:79514693-79514765:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8297119140625	2	553.827101	1105.63965	2.7249	0.0015091	2.7747	0.0015367	5.4996	0.0030458	553.8284487577807	102.26	0.67956	102.56	102.22	102.9	0.29865					38	15	3	0	0	0	0.77546	1	12464	12464		31.955	4.0726	1	607180			14522	11539	9992	10001	16737	16737					0.09105434705088555
HLVSLQILK	9	Unmodified	_HLVSLQILK_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	525.8358764648438	2	525.837134	1049.65972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.178	1	42.243	41.743	42.743	0.065037								0	0	0	0.32469	1	2817	2817		21.96	0	1				14523	5333	9993	10002	16738	16738					0.1368718564503979
HLVYGGRV	8	Unmodified	_HLVYGGRV_					0	0	0			REV__ENSG00000090861|ENST00000261772|AARS1	REV__ENSG00000090861|ENST00000261772|AARS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7540283203125	2	450.756144	899.497735	-1.264	-0.00056978	-3.0711	-0.0013843	-4.3351	-0.0019541	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.86791	1	7607	7607		28.254	0.37203	1	414240	+		14524	16997	9994	10003	16739	16739					0.04396641682762947
HLWRRQWRPRR	11	Unmodified	_HLWRRQWRPRR_					0	0	0		ENSG00000089692|ENST00000203629|LAG3	ENSG00000089692|ENST00000203629|LAG3	ENSG00000089692|ENST00000203629|LAG3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.648193359375	3	549.650297	1645.92906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.143	1	30.207	29.707	30.707	0.063948								0	0	0	0.56276	1	1317	1317		3.4087	1.8857	1				14525	1630	9995	10004	16740	16740					0.13193557104727915
HLYDRRIVITR	11	Unmodified	_HLYDRRIVITR_					0	0	0			REV__ENSG00000142534|ENST00000270625|RPS11	REV__ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.2825012207031	3	481.284398	1440.83137	-0.83529	-0.00040201	-1.6318	-0.00078535	-2.4671	-0.0011874	481.2835872163677	101.92	1.5231	101.92	100.91	102.43	0					93	37	3	0	0	0	0.76087	1	10407	10407		19.627	1.7938	1	462650	+		14526	19742	9996	10005	16741	16741					0.12858310665387762
HLYDRRIVITR	11	Unmodified	_HLYDRRIVITR_					0	0	0			REV__ENSG00000142534|ENST00000270625|RPS11	REV__ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.28271484375	3	481.284398	1440.83137	-0.77355	-0.0003723	-1.9361	-0.00093182	-2.7097	-0.0013041	481.28339459501956	101.39	1.951	101.6	100.24	102.19	0.2058					116	46	4	0	0	0	0.77803	1	10659	10659		15.921	1.8346	1	699120	+		14527	19742	9996	10005	16742	16742					0.12858310665387762
HLYLFRKKMWR	11	Unmodified	_HLYLFRKKMWR_					0	0	0			REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.7833251953125	3	526.634374	1576.88129	-0.25299	-0.00013323	1.1895	0.00062642	0.9365	0.00049319	526.6347512327831	49.344	0.61689	49.32	48.883	49.5	-0.024029					21	13	2	0	0	0	0.1838	1	4243	4243		3.2113	0	1	62127	+		14528	24369	9997	10006	16743	16743					0.11592722069690353
HLYLFRKKMWR	11	Unmodified	_HLYLFRKKMWR_					0	0	0			REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	526.634374	1576.88129	0.13076	6.886E-05	1.2144	0.00063952	1.3451	0.00070838	526.6347484637593	49.16	0.57461	49.154	48.781	49.355	-0.0056381	-0.082972	1.6961E-05	NaN	3.2113	20	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68203	+		14529	24369	9997	10006							0.11592722069690353
HLYLPLPS	8	Unmodified	_HLYLPLPS_					0	0	0		ENST00000485259.1_1_9:35741569-35741881:-|nuORF	ENST00000485259.1_1_9:35741569-35741881:-|nuORF	ENST00000485259.1_1_9:35741569-35741881:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.2682800292969	2	470.268553	938.522553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.256	1	61.81	61.31	62.31	0.55386								0	0	0	0.30928	1	6544	6544		46.766	2.2354	1				14530	12551	9998	10007	16744	16744					0.050832767654810596
HLYRVISE	8	Unmodified	_HLYRVISE_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.784912109375	2	508.779816	1015.54508	1.0237	0.00052084	2.1995	0.0011191	3.2232	0.0016399	509.28346882916594	16.893	0.21033	16.282	16.095	16.305	-0.6107					6	4	2	0	0	0	0.4196	1	180	180		42.474	0	1	21141			14531	7276	9999	10008	16745	16745					0.03792876163095116
HLYVCSICQ	9	Unmodified	_HLYVCSICQ_					0	0	0		ENSG00000136878|ENST00000372429|USP20	ENSG00000136878|ENST00000372429|USP20	ENSG00000136878|ENST00000372429|USP20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.2467041015625	2	533.246437	1064.47832	-0.099838	-5.3238E-05	3.1037	0.001655	3.0039	0.0016018	533.247993551336	49.929	0.65734	49.958	49.561	50.218	0.029629					27	16	2	0	0	0	0.76255	1	3908	3908		35.618	5.1146	1	240120			14532	4151	10000	10009	16746	16746					-0.05133818714671179
HMGTLTQYC	9	Unmodified	_HMGTLTQYC_					0	0	0			REV__ENST00000447216.2_1_11:118889505-118891019:+|nuORF	REV__ENST00000447216.2_1_11:118889505-118891019:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.2294921875	2	527.228245	1052.44194	1.5744	0.00083009	1.4529	0.00076604	3.0274	0.0015961	527.2289853109975	89.943	0.64899	90.394	90.255	90.904	0.45058					29	16	2	0	0	0	0.78536	1	10670	10670		29.15	2.3535	1	1029900	+		14533	26816	10001	10010	16747	16747					-0.0821869561141284
HMHLFRNR	8	Unmodified	_HMHLFRNR_					0	0	0			REV__ENSG00000111670|ENST00000299314|GNPTAB	REV__ENSG00000111670|ENST00000299314|GNPTAB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.7968139648438	2	555.790527	1109.5665	0.91689	0.0005096	2.6768	0.0014877	3.5937	0.0019973	555.7920395060265	27.03	0.51847	27.003	26.749	27.267	-0.027704					35	13	4	0	0	0	0.4196	1	1178	1178		29.842	0	1	61653	+		14534	17883	10002	10011	16748	16748					0.01609982710829172
HMHMATQGF	9	Unmodified	_HMHMATQGF_					0	0	0		ENST00000427832.2_1_1:111923053-111923173:+|nuORF	ENST00000427832.2_1_1:111923053-111923173:+|nuORF	ENST00000427832.2_1_1:111923053-111923173:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2276611328125	2	530.228579	1058.44261	0.27818	0.0001475	-0.82833	-0.00043921	-0.55016	-0.00029171	530.2281028649721	29.608	1.0487	29.565	29.054	30.103	-0.043095					65	31	3	0	0	0	0.67345	1	1569	1569		42.396	3.59	1	312550			14535	11584	10003	10012	16749	16749					-0.084278561716701
HMQNIPGFM	9	Unmodified	_HMQNIPGFM_					0	0	0		ENST00000534547.1_1_11:130165680-130166253:+|nuORF	ENST00000534547.1_1_11:130165680-130166253:+|nuORF	ENST00000534547.1_1_11:130165680-130166253:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.7706298828125	2	537.746605	1073.47866	1.6275	0.00087518	1.0753	0.00057822	2.7027	0.0014534	537.747060807952	24.856	0.44497	24.342	24.099	24.544	-0.51365					18	9	3	0	0	0	0.20789	1	1257	1257		29.15	0	1	99978			14536	13410	10004	10013	16750	16750					-0.05514398994819203
HMRRFLSRKKI	11	Unmodified	_HMRRFLSRKKI_					0	0	0		ENSG00000027847|ENST00000029410|B4GALT7	ENSG00000027847|ENST00000029410|B4GALT7	ENSG00000027847|ENST00000029410|B4GALT7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.63299560546875	3	491.297873	1470.87179	-1.6433	-0.00080736	4.0801	0.0020045	2.4368	0.0011972	491.29989994229794	112.5	0.70615	112.47	112.28	112.99	-0.032333					41	19	3	0	0	0	0.78391	1	12057	12057		14.694	1.7362	1	409620			14537	875	10005	10014	16751	16751					0.1551895378415793
HMSASKINTK	10	Oxidation (M)	_HM(Oxidation (M))SASKINTK_		HM(1)SASKINTK		HM(45)SASKINTK	0	0	1			REV__nc|ENSG00000159479|Q96G25-3|MED8	REV__nc|ENSG00000159479|Q96G25-3|MED8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.7899169921875	2	566.792598	1131.57064	0.69296	0.00039277	-3.699	-0.0020966	-3.0061	-0.0017038	566.790412921783	21.89	0.74046	21.265	20.955	21.695	-0.62558					43	18	3	0	0	0	0.69342	1	861	861		45.022	7.514	1	497190	+		14538	20664	10006	10015	16752	16752		306			0.01011982623208496
HMVGRRVL	8	Unmodified	_HMVGRRVL_					0	0	0		ENSG00000120708|ENST00000442011|TGFBI;ENST00000515433.1_1_5:135382542-135382743:+|nuORF;ENST00000506699.5_1_5:135382542-135383974:+|nuORF	ENSG00000120708|ENST00000442011|TGFBI	ENSG00000120708|ENST00000442011|TGFBI	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.23651123046875	2	484.284546	966.554539	-0.090763	-4.3955E-05	0.0041422	2.006E-06	-0.086621	-4.1949E-05	484.28278152118264	85.404	0.52473	85.471	85.16	85.685	0.067261					16	11	2	0	0	0	0.4196	1	8583	8583		42.474	0	1	27677			14539	3147	10007	10016	16753	16753					0.06992365967630576
HMVRRHRTV	9	Unmodified	_HMVRRHRTV_					0	0	0			REV__ENST00000466016.5_1_17:45904324-45908883:-|nuORF	REV__ENST00000466016.5_1_17:45904324-45908883:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3330078125	2	596.335633	1190.65671	-0.50602	-0.00030176	-4.2486	-0.0025336	-4.7546	-0.0028353	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.7932	1	10235	10235		26.693	1.1189	1	1259900	+		14540	20637	10008	10017	16754	16754					0.06901032039240818
HNFAFFPG	8	Unmodified	_HNFAFFPG_					0	0	0		ENSG00000060642|ENST00000674202|PIGV	ENSG00000060642|ENST00000674202|PIGV	ENSG00000060642|ENST00000674202|PIGV	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.7223815917969	2	468.72177	935.428987	-0.82424	-0.00038634	4.0533	0.0018999	3.2291	0.0015135	468.7236330503741	70.3	0.63596	70.262	70.051	70.687	-0.037865					55	33	2	0	0	0	0.90024	1	6827	6827		39.021	4.849	1	322340			14541	1065	10009	10018	16755	16755					-0.04131022616957125
HNFAFFPG	8	Unmodified	_HNFAFFPG_					0	0	0		ENSG00000060642|ENST00000674202|PIGV	ENSG00000060642|ENST00000674202|PIGV	ENSG00000060642|ENST00000674202|PIGV	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7234191894531	2	468.72177	935.428987	-0.013184	-6.1798E-06	2.9426	0.0013793	2.9294	0.0013731	468.7232380662735	77.148	2.5429	77.547	77.268	79.811	0.3997					145	61	5	0	0	0	0.89457	1	8817	8817		37.028	11.454	1	15095000			14542	1065	10009	10018	16756	16756					-0.04131022616957125
HNGLVGRLIGK	11	Unmodified	_HNGLVGRLIGK_					0	0	0		nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;ENSG00000073792|ENST00000382199|IGF2BP2;ENST00000550858.1_1_12:42681476-42682067:+|nuORF	nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2	nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3540649414062	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.76322	1	12332	12332		19.104	0.84144	1	3937500			14543	1299	10010	10019	16757	16757					0.1186360713677459
HNGMASCDD	9	Unmodified	_HNGMASCDD_					0	0	0			REV__nc|ENSG00000166736|P46098-3|HTR3A	REV__nc|ENSG00000166736|P46098-3|HTR3A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	475.1585388183594	2	475.160559	948.306565	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.363	1	79.502	79.002	80.002	0.13883								0	0	0	0.32159	1	7528	7528		23.042	3.6825	1		+		14544	21312	10011	10020	16758	16758					-0.1696559547300467
HNGSVLVLPI	10	Unmodified	_HNGSVLVLPI_					0	0	0			REV__ENSG00000103381|ENST00000381774|CPPED1	REV__ENSG00000103381|ENST00000381774|CPPED1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8267211914062	2	524.811116	1047.60768	0.81104	0.00042564	2.2114	0.0011606	3.0225	0.0015862	524.8120549218836	98.98	0.3642	99.137	98.99	99.354	0.15659					13	8	3	0	0	0	0.37624	1	10316	10316		49.442	5.3247	1	299060	+		14545	17412	10012	10021	16759	16759					0.08578022231290561
HNIKVDVTKKK	11	Unmodified	_HNIKVDVTKKK_					0	0	0			REV__nc|ENSG00000173193|Q460N5-3|PARP14;REV__nc|ENSG00000173193|Q460N5-5|PARP14	REV__nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2680358886719	3	437.269866	1308.78777	-1.7045	-0.00074531	-2.8139	-0.0012304	-4.5184	-0.0019757	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.77803	1	4288	4288		15.921	1.8346	1	3449100	+		14546	21898;30035	10013	10022	16760	16760					0.14572701168253843
HNITQTVDLPS	11	Unmodified	_HNITQTVDLPS_					0	0	0		ENST00000494087.5_1_13:45780977-45781184:+|nuORF	ENST00000494087.5_1_13:45780977-45781184:+|nuORF	ENST00000494087.5_1_13:45780977-45781184:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	409.2159423828125	3	408.878815	1223.61462	-2.1156	-0.00086504	3.9672	0.0016221	1.8516	0.00075707	408.8803002562497	23.885	1.1542	23.885	23.413	24.568	0					112	51	3	0	0	0	0.7144	1	816	816		20.315	0	1	176940			14547	12745	10014	10023	16761	16761					0.011752903211800003
HNKQRRLTSK	10	Unmodified	_HNKQRRLTSK_					0	0	0			REV__nc|ENSG00000205277|Q9UKN1|MUC12	REV__nc|ENSG00000205277|Q9UKN1|MUC12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3768310546875	2	634.370727	1266.7269	6.8506	0.0043458	2.7933	0.001772	9.6439	0.0061178	634.3723115389404	111.82	0.6669	111.85	111.67	112.34	0.032715					57	24	4	0	0	0	0.86718	1	13558	13558		27.882	1.1893	1	3829000	+		14548	30170	10015	10024	16762	16762					0.10420608908680151
HNKQRRLTSK	10	Unmodified	_HNKQRRLTSK_					0	0	0			REV__nc|ENSG00000205277|Q9UKN1|MUC12	REV__nc|ENSG00000205277|Q9UKN1|MUC12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3782958984375	2	634.370727	1266.7269	6.8435	0.0043413	3.4115	0.0021641	10.255	0.0065054	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.86471	1	13761	13761		30.318	7.7381	1	75725	+		14549	30170	10015	10024	16763	16763					0.10420608908680151
HNLPDGITK	9	Unmodified	_HNLPDGITK_					0	0	0		nc|ENSG00000130635|P20908-2|COL5A1;ENSG00000130635|ENST00000371817|COL5A1;ENST00000464187.1_1_9:137545303-137583524:+|nuORF	nc|ENSG00000130635|P20908-2|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7705993652344	2	497.769448	993.524344	-0.46792	-0.00023292	3.7254	0.0018544	3.2575	0.0016215	497.7711513163207	26.209	0.8904	25.952	25.551	26.441	-0.25721					41	19	3	0	0	0	0.038282	1	1409	1409		113.41	1.7633	1	1659300			14550	3662	10016	10025	16764	16764					0.02732285783417865
HNMFKINKLV	10	Unmodified	_HNMFKINKLV_					0	0	0			REV__ENSG00000169548|ENST00000302097|ZNF280A	REV__ENSG00000169548|ENST00000302097|ZNF280A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.9062194824219	3	415.237509	1242.6907	0.19411	8.0602E-05	3.2629	0.0013549	3.457	0.0014355	415.2384858491241	30.835	0.91193	30.839	30.448	31.36	0.0037193					47	20	3	0	0	0	0.37624	1	2109	2109		29.17	0.59333	1	167770	+		14551	21583	10017	10026	16765	16765					0.07906015687626677
HNPLVAFTVA	10	Unmodified	_HNPLVAFTVA_					0	0	0			REV__ENST00000243918.9_1_20:43995899-43996259:+|nuORF	REV__ENST00000243918.9_1_20:43995899-43996259:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.794677734375	2	534.795466	1067.57638	-1.6021	-0.00085681	1.5908	0.00085076	-0.011304	-6.0455E-06	534.7961451235103	29.642	3.4749	29.642	28.953	32.428	0					302	131	4	0	0	0	0.64457	1	1252	1252		47.657	0	1	542890	+		14552	24240	10018	10027	16766	16766					0.045294491971844764
HNPNPTATSF	10	Unmodified	_HNPNPTATSF_					0	0	0			REV__chr12:91178585-91271285|15|35.73|0.01|12.47|-|2|TE_info:L2a,L2a_dup124761,L2,LINE,donor,-,91271285,91272064|DCN,None|5	REV__chr12:91178585-91271285|15|35.73|0.01|12.47|-|2|TE_info:L2a,L2a_dup124761,L2,LINE,donor,-,91271285,91272064|DCN,None|5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.2531127929688	2	543.254163	1084.49377	0.14565	7.9126E-05	2.7222	0.0014789	2.8679	0.001558	543.2556211966155	29.557	0.64093	29.468	29.276	29.917	-0.089544					24	14	2	0	0	0	0.73395	1	1883	1883		42.864	2.0861	1	294400	+		14553	15558	10019	10028	16767	16767					-0.045094926016190584
HNQIQTILTKS	11	Unmodified	_HNQIQTILTKS_					0	0	0		ENST00000542527.6_1_16:22092304-22092481:+|nuORF	ENST00000542527.6_1_16:22092304-22092481:+|nuORF	ENST00000542527.6_1_16:22092304-22092481:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8604125976562	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.7434	1	13095	13095		23.523	0.94304	1	27133000			14554	13536	10020	10029	16768	16768					0.07451545000549231
HNVAIQNEE	9	Unmodified	_HNVAIQNEE_					0	0	0		ENST00000506396.1_1_5:31249548-31249821:+|nuORF	ENST00000506396.1_1_5:31249548-31249821:+|nuORF	ENST00000506396.1_1_5:31249548-31249821:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.251953125	2	527.25162	1052.48869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.246	1	19.173	18.673	19.673	-0.073704								0	0	0	0.32469	1	402	402		21.96	0	1				14555	12936	10021	10030	16769	16769					-0.035457964642318984
HNVFAEPKK	9	Unmodified	_HNVFAEPKK_					0	0	0			REV__nc|ENSG00000077157|O60237-5|PPP1R12B	REV__nc|ENSG00000077157|O60237-5|PPP1R12B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.29248046875	2	535.293091	1068.57163	1.6235	0.00086906	-1.6239	-0.00086927	-0.00039767	-2.1287E-07	535.2920952224055	26.755	0.67277	26.415	26.186	26.859	-0.34035					29	14	3	0	0	0	0.78124	1	1496	1496		30.318	1.1477	1	225540	+		14556	16737	10022	10031	16770	16770					0.04008565054414248
HNVINSGCFS	10	Unmodified	_HNVINSGCFS_					0	0	0			REV__ENSG00000181785|ENST00000641320|OR5AS1	REV__ENSG00000181785|ENST00000641320|OR5AS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.2401123046875	2	539.242741	1076.47093	0.48952	0.00026397	-1.2956	-0.00069867	-0.80613	-0.0004347	539.2418908615597	61.858	0.64476	61.978	61.607	62.252	0.11957					47	27	2	0	0	0	0.67571	1	5364	5364		45.972	3.4978	1	434680	+		14557	22478	10023	10032	16771	16771					-0.0642483499075297
HNVINSGCFS	10	Unmodified	_HNVINSGCFS_					0	0	0			REV__ENSG00000181785|ENST00000641320|OR5AS1	REV__ENSG00000181785|ENST00000641320|OR5AS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	539.2428588867188	2	539.242741	1076.47093	-0.56157	-0.00030282	-0.10246	-5.525E-05	-0.66403	-0.00035807	539.2426054566623	61.977	0.63985	61.993	61.594	62.234	0.015724					36	24	2	0	0	0	0.44803	1	5402	5402		60.118	6.7668	1	430660	+		14558	22478	10023	10032	16772	16772					-0.0642483499075297
HNWYKRLRRL	10	Unmodified	_HNWYKRLRRL_					0	0	0			REV__ENST00000430580.6_1_1:16913598-16914274:-|nuORF	REV__ENST00000430580.6_1_1:16913598-16914274:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.2821350097656	3	481.2811	1440.82147	0.78447	0.00037755	3.4369	0.0016541	4.2214	0.0020317	481.2826753418143	101.45	1.7107	101.6	100.6	102.31	0.14352					107	41	3	0	0	0	0.85285	1	10645	10645		16.717	2.6314	1	602290	+		14559	26606	10024	10033	16773	16773					0.11869167450686291
HPAAFVVM	8	Unmodified	_HPAAFVVM_					0	0	0			REV__nc|ENSG00000156313|Q92834-2|RPGR	REV__nc|ENSG00000156313|Q92834-2|RPGR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7741394042969	2	436.228374	870.442194	-0.35211	-0.0001536	4.2981	0.0018749	3.946	0.0017213	436.22946083817595	27.326	0.22056	27.287	27.213	27.434	-0.038523					7	4	2	0	0	0	0.4196	1	1292	1292		24.504	13.638	1	7953.2	+		14560	29949	10025	10034	16774	16774					0.0017909217078795336
HPASAPLPLV	10	Unmodified	_HPASAPLPLV_					0	0	0			REV__ENST00000562570.1_1_16:1030223-1030409:-|nuORF	REV__ENST00000562570.1_1_16:1030223-1030409:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2904968261719	2	501.292559	1000.57057	-0.75978	-0.00038087	-2.8882	-0.0014478	-3.6479	-0.0018287	501.290862689854	99.716	1.5054	99.716	99.182	100.69	0					84	35	4	0	0	0	0.86452	1	10105	10105		30.504	3.8107	1	611590	+		14561	28802	10026	10035	16775	16775					0.07030350685511166
HPAVRGSLRP	10	Unmodified	_HPAVRGSLRP_					0	0	0		ENST00000356387.6_1_7:102087640-102088213:+|nuORF	ENST00000356387.6_1_7:102087640-102088213:+|nuORF	ENST00000356387.6_1_7:102087640-102088213:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3197021484375	2	545.317432	1088.62031	-0.68757	-0.00037494	-0.58844	-0.00032088	-1.276	-0.00069583	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.85694	1	8368	8368		21.96	0	1	3608000			14562	10368	10027	10036	16776	16776					0.07954478414194455
HPCFKGFGLP	10	Unmodified	_HPCFKGFGLP_					0	0	0			REV__ENSG00000081248|ENST00000362061|CACNA1S	REV__ENSG00000081248|ENST00000362061|CACNA1S	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.7796020507812	2	551.778762	1101.54297	-0.32156	-0.00017743	-0.73812	-0.00040728	-1.0597	-0.00058471	551.7780212693134	30.336	0.54678	30.361	30.135	30.681	0.025013					23	14	2	0	0	0	0.86452	1	1579	1579		30.504	0.18592	1	84239	+		14563	16822	10028	10037	16777	16777					-0.0037387584636690008
HPDEKSIITY	10	Unmodified	_HPDEKSIITY_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	601.8057861328125	2	601.806228	1201.5979	-1.7247	-0.001038	0.79408	0.00047788	-0.93066	-0.00056008	601.8066774948625	41.56	0.75887	42.194	41.988	42.746	0.6339					46	19	3	0	0	0	0.21391	1	3677	3677		82.75	8.4954	1	1485500			14564	2832	10029	10038	16778	16778					0.005167894352325675
HPELRLLAL	9	Unmodified	_HPELRLLAL_					0	0	0			REV__ENSG00000165188|ENST00000489339|RNF183	REV__ENSG00000165188|ENST00000489339|RNF183	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3265380859375	2	531.326934	1060.63931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.98	1	105.21	104.71	105.71	0.2268								0	0	0	0.31828	1	12831	12831		24.203	3.2558	1		+		14565	21161	10030	10039	16779	16779					0.1114201498521652
HPEPSCLCF	9	Unmodified	_HPEPSCLCF_					0	0	0		ENST00000563305.1_1_16:67472744-67473248:-|nuORF	ENST00000563305.1_1_16:67472744-67473248:-|nuORF	ENST00000563305.1_1_16:67472744-67473248:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.314208984375	2	516.717513	1031.42047	-0.02815	-1.4545E-05	-0.85206	-0.00044027	-0.88021	-0.00045482	516.7168622032735	31.803	0.85502	31.929	31.604	32.459	0.12642					42	19	3	0	0	0	0.20789	1	2186	2186		26.796	0	1	293120			14566	13866	10031	10040	16780	16780					-0.09398080640107764
HPFFRGVA	8	Unmodified	_HPFFRGVA_					0	0	0		nc|ENSG00000167524|Q96LW2|RSKR;ENSG00000167524|ENST00000301037|RSKR	nc|ENSG00000167524|Q96LW2|RSKR	nc|ENSG00000167524|Q96LW2|RSKR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.68975830078125	2	465.750862	929.487171	-1.3896	-0.00064722	1.4145	0.00065882	0.024911	1.1602E-05	465.7507086455911	58.065	1.7555	58.459	57.856	59.612	0.39407					75	42	4	0	0	0	0.4196	1	6202	6202		14.664	7.4707	1	691400			14567	6297	10032	10041	16781	16781					0.019606590283274272
HPFFSLLLFA	10	Unmodified	_HPFFSLLLFA_					0	0	0		ENST00000367760.7_1_1:170632875-170632923:+|nuORF	ENST00000367760.7_1_1:170632875-170632923:+|nuORF	ENST00000367760.7_1_1:170632875-170632923:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3323974609375	2	596.331685	1190.64882	-0.50603	-0.00030176	2.372	0.0014145	1.866	0.0011127	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.81018	1	10187	10187		38.806	0.99462	1	1259900			14568	10568	10033	10042	16782	16782					0.061117832707623165
HPFHVITLRSM	11	Unmodified	_HPFHVITLRSM_					0	0	0		ENSG00000109919|ENST00000302503|MTCH2	ENSG00000109919|ENST00000302503|MTCH2	ENSG00000109919|ENST00000302503|MTCH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	445.6360778808594	3	446.576413	1336.70741	0.18287	8.1666E-05	1.4163	0.00063247	1.5991	0.00071414	446.5769072491413	37.938	0.56337	38.032	37.803	38.366	0.094318					32	18	2	0	0	0	0.1767	1	2187	2187		5.6988	0	1	105440			14569	2492	10034	10043	16783	16783					0.05252516573546018
HPFSLPQTH	9	Unmodified	_HPFSLPQTH_					0	0	0		ENSG00000182158|ENST00000330387|CREB3L2;nc|ENSG00000182158|Q70SY1-2|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3280639648438	2	532.269616	1062.52468	2.1278	0.0011326	-4.4559	-0.0023717	-2.3281	-0.0012392	532.2662513300533	104.41	2.1293	104.6	103.76	105.89	0.18887					93	53	3	0	0	0	0.20789	1	12795	12795		11.511	0	1	115630			14570	7427	10035	10044	16784	16784					-0.004082944967194635
HPGGKQLV	8	Unmodified	_HPGGKQLV_					0	0	0			REV__ENST00000303991.4_1_5:176025423-176025792:-|nuORF	REV__ENST00000303991.4_1_5:176025423-176025792:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2419128417969	2	418.24287	834.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.982	1	32.04	31.54	32.54	0.058315								0	0	0	0.29353	1	1485	1485		28.254	2.8041	1		+		14571	24807	10036	10045	16785	16785					0.04732952791414391
HPGLPCFI	8	Unmodified	_HPGLPCFI_					0	0	0			REV__ENST00000531319.1_1_11:134306400-134306499:+|nuORF	REV__ENST00000531319.1_1_11:134306400-134306499:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24090576171875	2	442.228374	882.442194	-1.2795	-0.00056582	-3.0588	-0.0013527	-4.3382	-0.0019185	442.2255134925596	81.407	0.24046	81.407	81.212	81.452	0					12	8	2	0	0	0	0.4196	1	7548	7548		33.493	11.533	1	28943	+		14572	28298	10037	10046	16786	16786					-0.003729078292167287
HPGRPGRASGK	11	Unmodified	_HPGRPGRASGK_					0	0	0		ENST00000560975.5_1_15:63335028-63335316:+|nuORF	ENST00000560975.5_1_15:63335028-63335316:+|nuORF	ENST00000560975.5_1_15:63335028-63335316:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3110961914062	2	560.310138	1118.60572	0.34474	0.00019316	2.5762	0.0014434	2.9209	0.0016366	560.3114568572595	38.447	0.52443	38.389	38.108	38.632	-0.057915					23	15	2	0	0	0	0.72106	1	2284	2284		28.081	0.19925	1	138880			14573	13824	10038	10047	16787	16787					0.05116406266051854
HPHIIKLV	8	Unmodified	_HPHIIKLV_					0	0	0		ENST00000397006.2_1_5:40777312-40798264:-|nuORF	ENST00000397006.2_1_5:40777312-40798264:-|nuORF	ENST00000397006.2_1_5:40777312-40798264:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8053894042969	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.727	1	39.679	39.179	40.179	-0.04789								0	0	0	0.30784	1	2458	2458		14.664	1.7049	1				14574	11132	10039	10048	16788	16788					0.11714664647649897
HPHIVKLI	8	Unmodified	_HPHIVKLI_					0	0	0		nc|ENSG00000120899|Q14289-2|PTK2B;ENSG00000120899|ENST00000346049|PTK2B;ENST00000397497.8_2_8:27288866-27309154:+|nuORF;ENST00000519899.5_1_8:141756852-141774450:-|nuORF;nc|ENSG00000169398|Q05397-2|PTK2;nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-4|PTK2;nc|ENSG00000169398|Q05397-3|PTK2	nc|ENSG00000120899|Q14289-2|PTK2B;nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8058776855469	2	478.805637	955.596721	-2.669	-0.0012779	3.4642	0.0016587	0.7952	0.00038075	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.82464	1	2783	2783		21.702	1.2205	1	370420			14575	6494;3157	10040	10049	16789	16789					0.11714664647661266
HPHPLITVL	9	Unmodified	_HPHPLITVL_					0	0	0		ENSG00000188352|ENST00000338382|FOCAD;ENST00000604103.1_1_9:20740247-20764921:+|nuORF	ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.809326171875	2	513.808377	1025.6022	0.97987	0.00050346	0.12922	6.6395E-05	1.1091	0.00056986	513.8083435529123	49.803	1.6726	50.648	49.911	51.584	0.84501					82	40	3	0	0	0	0.72402	1	4885	4885		38.806	8.3025	1	1233800			14576	7925	10041	10050	16790	16790					0.0904234343945518
HPHYPTKKLA	10	Unmodified	_HPHYPTKKLA_					0	0	0			REV__nc|ENSG00000053254|O00409|FOXN3	REV__nc|ENSG00000053254|O00409|FOXN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3327026367188	2	596.33529	1190.65603	-0.50602	-0.00030176	-3.6738	-0.0021908	-4.1798	-0.0024926	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.80179	1	10297	10297		39.253	0.49923	1	1259900	+		14577	16388	10042	10051	16791	16791					0.06832515871178657
HPIFLLVVLSQ	11	Unmodified	_HPIFLLVVLSQ_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1;ENST00000531756.5_1_11:74862426-74914042:+|nuORF;nc|ENSG00000137491|O94956-2|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.75213623046875	3	422.592058	1264.75434	-1.5084	-0.00063743	2.5414	0.001074	1.033	0.00043654	422.5929790212825	77.645	0.098045	77.736	77.679	77.777	0.091438					9	4	3	0	0	0	0.1767	1	7258	7258		18.531	4.445	1	23823			14578	4203	10043	10052	16792	16792					0.13255699396404452
HPIIKAAY	8	Unmodified	_HPIIKAAY_					0	0	0			REV__ENST00000514306.1_1_5:57754443-57755636:-|nuORF	REV__ENST00000514306.1_1_5:57754443-57755636:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.76727294921875	2	456.76872	911.522887	0.96672	0.00044157	-3.863	-0.0017645	-2.8962	-0.0013229	456.7668840789674	16.289	0.34063	16.367	16.203	16.544	0.077959					30	14	3	0	0	0	0.9159	1	87	87		44.531	9.3304	1	148700	+		14579	19955	10044	10053	16793	16793					0.06358696485312976
HPIKIEKEI	9	Unmodified	_HPIKIEKEI_					0	0	0			REV__ENSG00000182253|ENST00000336292|SYNM	REV__ENSG00000182253|ENST00000336292|SYNM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8297119140625	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.67345	1	8669	8669		42.396	0	1	1728300	+		14580	22511	10045	10054	16794	16794					0.10094577919812764
HPIKIPEVHIK	11	Unmodified	_HPIKIPEVHIK_					0	0	0			REV__L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|77|3|sense	REV__L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|77|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.6041259765625	3	437.602957	1309.78704	-0.39751	-0.00017395	4.0004	0.0017506	3.6029	0.0015766	437.60462813644443	16.143	0.34375	16.063	15.955	16.299	-0.080017					26	13	3	0	0	0	0.76892	1	82	82		17.833	1.8264	1	98668	+		14581	29548	10046	10055	16795	16795					0.14453906519224802
HPILVVVSK	9	Unmodified	_HPILVVVSK_					0	0	0		chr7:121062950-121064238|21|38.05|0.09|8.68|+|2|TE_info:THE1B,THE1B_dup10260,ERVL-MaLR,LTR,donor,+,121062673,121062950|None,CPED1|2	chr7:121062950-121064238|21|38.05|0.09|8.68|+|2|TE_info:THE1B,THE1B_dup10260,ERVL-MaLR,LTR,donor,+,121062673,121062950|None,CPED1|2	chr7:121062950-121064238|21|38.05|0.09|8.68|+|2|TE_info:THE1B,THE1B_dup10260,ERVL-MaLR,LTR,donor,+,121062673,121062950|None,CPED1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.3198547363281	2	496.318577	990.622602	-0.26266	-0.00013036	0.28862	0.00014325	0.025961	1.2885E-05	496.31871000594134	19.705	0.46872	19.631	19.507	19.975	-0.073704					18	14	2	0	0	0	0.76255	1	453	453		35.618	1.4457	1	25212			14582	489	10047	10056	16796	16796					0.12691514099276446
HPISFTRSP	9	Unmodified	_HPISFTRSP_					0	0	0		ENST00000543885.2_1_18:44036595-44036901:+|nuORF	ENST00000543885.2_1_18:44036595-44036901:+|nuORF	ENST00000543885.2_1_18:44036595-44036901:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2769165039062	2	521.277441	1040.54033	0.90467	0.00047159	-0.84326	-0.00043957	0.061414	3.2014E-05	521.2768455605345	37.247	0.65162	37.56	37.329	37.98	0.31312					37	15	3	0	0	0	0.58668	1	2987	2987		47.657	3.5405	1	830420			14583	13564	10048	10057	16797	16797					0.021679920203496295
HPISFTRSP	9	Unmodified	_HPISFTRSP_					0	0	0		ENST00000543885.2_1_18:44036595-44036901:+|nuORF	ENST00000543885.2_1_18:44036595-44036901:+|nuORF	ENST00000543885.2_1_18:44036595-44036901:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.2771606445312	2	521.277441	1040.54033	0.83271	0.00043408	-0.8593	-0.00044793	-0.026582	-1.3856E-05	521.2768809848477	37.155	0.73869	37.641	37.325	38.063	0.48581					36	17	3	0	0	0	0.77696	1	2978	2978		31.53	2.3803	1	855240			14584	13564	10048	10057	16798	16798					0.021679920203496295
HPISSEELL	9	Unmodified	_HPISSEELL_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7688598632812	2	512.769114	1023.52368	-0.5023	-0.00025756	0.034974	1.7934E-05	-0.46732	-0.00023963	512.7690290219534	48.59	1.7173	49.06	48.082	49.799	0.46941					100	42	5	0	0	0	0.056144	3	4679	4669;4679;4704		105.27	31.294	1	5404400			14585	3973	10049	10058	16799;16800;16801	16800					0.01285446343717922
HPISSEELL	9	Unmodified	_HPISSEELL_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.7686767578125	2	512.769114	1023.52368	0.29414	0.00015083	-0.69853	-0.00035818	-0.40439	-0.00020736	512.7686314865582	48.401	1.6422	49.305	48.411	50.053	0.90424					104	40	4	0	0	0	0.22537	3	4682	4664;4682;4694		71.378	8.1907	1	5283800			14586	3973	10049	10058	16802;16803;16804	16803					0.01285446343717922
HPISSEELL	9	Unmodified	_HPISSEELL_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	512.769114	1023.52368	-0.23668	-0.00012136	1.5265	0.00078276	1.2899	0.0006614	512.7695086448699	49.268	0.96986	49.268	48.837	49.807	0.00016785	0.083167	0.0016296	NaN	105.27	44	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	192930			14587	3973	10049	10058							0.01285446343717922
HPKDRLHL	8	Unmodified	_HPKDRLHL_					0	0	0			REV__ENSG00000159915|ENST00000683810|ZNF233	REV__ENSG00000159915|ENST00000683810|ZNF233	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2799987792969	2	508.293425	1014.5723	0.14576	7.4091E-05	0.37244	0.00018931	0.51821	0.0002634	508.29375574937376	26.04	0.65805	25.783	25.465	26.123	-0.2572					19	14	2	0	0	0	0.4196	1	1426	1426		55.504	0	1	63639	+		14588	20686	10050	10059	16805	16805					0.06559404494123555
HPKKVAPG	8	Unmodified	_HPKKVAPG_					0	0	0		nc|ENSG00000131044|Q3SXZ7-3|TTLL9	nc|ENSG00000131044|Q3SXZ7-3|TTLL9	nc|ENSG00000131044|Q3SXZ7-3|TTLL9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2533264160156	2	417.253237	832.491922	1.3886	0.00057939	-1.3852	-0.00057797	0.0034104	1.423E-06	417.2525753416064	34.801	1.7468	35.182	34.852	36.599	0.3812					83	44	2	0	0	0	0.89457	1	2639	2639		37.028	8.7742	1	902180			14589	14913	10051	10060	16806	16806					0.06897543171089637
HPKPLDSAGHR	11	Unmodified	_HPKPLDSAGHR_					0	0	0		ENST00000510175.5_1_4:124430-154783:+|nuORF	ENST00000510175.5_1_4:124430-154783:+|nuORF	ENST00000510175.5_1_4:124430-154783:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.55224609375	3	405.551144	1213.6316	0.59269	0.00024037	2.8716	0.0011646	3.4643	0.001405	405.5523269463935	28.869	3.2114	28.696	27.713	30.924	-0.17336					183	75	5	0	0	0	0.68532	1	1853	1853		24.276	0	1	9724600			14590	13003	10052	10061	16807	16807					0.03333255717643624
HPKRNNLH	8	Unmodified	_HPKRNNLH_					0	0	0		ENST00000358303.8_1_7:129680937-129691088:-|nuORF;ENST00000484432.1_1_7:129683626-129691088:-|nuORF	ENST00000358303.8_1_7:129680937-129691088:-|nuORF	ENST00000358303.8_1_7:129680937-129691088:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.27978515625	2	508.280849	1014.54715	0.029362	1.4924E-05	-1.6558	-0.00084162	-1.6265	-0.0008267	508.2799882081312	26.317	1.2518	26.059	25.682	26.934	-0.2572					83	27	5	0	0	0	0.45589	1	1438	1438		77.944	3.4272	1	2089700			14591	10407	10053	10062	16808	16808					0.040453496915461074
HPKYKTEL	8	Unmodified	_HPKYKTEL_					0	0	0		ENSG00000128016|ENST00000597629|ZFP36;ENSG00000152518|ENST00000282388|ZFP36L2;ENSG00000185650|ENST00000439696|ZFP36L1;ENST00000555997.1_1_14:69256252-69257717:-|nuORF	ENSG00000128016|ENST00000597629|ZFP36;ENSG00000185650|ENST00000439696|ZFP36L1	ENSG00000185650|ENST00000439696|ZFP36L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.2819519042969	2	508.282192	1014.54983	0.91246	0.00046379	-0.89223	-0.0004535	0.020236	1.0285E-05	508.2815888687233	21.314	0.84947	21.382	21.152	22.001	0.068251					67	27	3	0	0	0	0.79403	3	555	555;562;579		63.306	11.971	1	202360			14592	7731;3526	10054	10063	16809;16810;16811	16809					0.04313760305831238
HPKYKTEL	8	Unmodified	_HPKYKTEL_					0	0	0		ENSG00000128016|ENST00000597629|ZFP36;ENSG00000152518|ENST00000282388|ZFP36L2;ENSG00000185650|ENST00000439696|ZFP36L1;ENST00000555997.1_1_14:69256252-69257717:-|nuORF	ENSG00000128016|ENST00000597629|ZFP36;ENSG00000185650|ENST00000439696|ZFP36L1	ENSG00000185650|ENST00000439696|ZFP36L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.282470703125	2	508.282192	1014.54983	-0.12807	-6.5097E-05	0.08257	4.1969E-05	-0.045502	-2.3128E-05	508.28210982040144	21.685	0.90281	21.62	21.308	22.211	-0.064743					74	30	3	0	0	0	0.79403	4	642	627;634;642;658		63.306	15.391	1	261030			14593	7731;3526	10054	10063	16812;16813;16814;16815	16814					0.04313760305831238
HPKYKTEL	8	Unmodified	_HPKYKTEL_					0	0	0		ENSG00000128016|ENST00000597629|ZFP36;ENSG00000152518|ENST00000282388|ZFP36L2;ENSG00000185650|ENST00000439696|ZFP36L1;ENST00000555997.1_1_14:69256252-69257717:-|nuORF	ENSG00000128016|ENST00000597629|ZFP36;ENSG00000185650|ENST00000439696|ZFP36L1	ENSG00000185650|ENST00000439696|ZFP36L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.28179931640625	2	508.282192	1014.54983	-0.0026911	-1.3679E-06	0.031136	1.5826E-05	0.028444	1.4458E-05	508.282055825422	21.65	0.96109	21.593	21.341	22.302	-0.057203					83	38	3	0	0	0	0.87479	3	636	599;629;636		57.811	5.5121	1	252740			14594	7731;3526	10054	10063	16816;16817;16818	16818					0.04313760305831238
HPLAVMPLSR	10	Unmodified	_HPLAVMPLSR_					0	0	0		ENST00000379619.5_1_2:28637264-28637390:+|nuORF	ENST00000379619.5_1_2:28637264-28637390:+|nuORF	ENST00000379619.5_1_2:28637264-28637390:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8200073242188	2	560.818418	1119.62228	-0.40201	-0.00022545	2.8946	0.0016233	2.4926	0.0013979	560.8199126084926	92.305	2.2839	92.767	91.977	94.26	0.46249					128	53	3	0	0	0	0.86348	1	11071	11071		31.53	1.0262	1	273790			14595	10898	10055	10064	16819	16819					0.06725771107767287
HPLEGTHEL	9	Unmodified	_HPLEGTHEL_					0	0	0		ENSG00000122299|ENST00000355758|ZC3H7A;ENST00000571676.5_1_16:11858892-11864657:-|nuORF	ENSG00000122299|ENST00000355758|ZC3H7A	ENSG00000122299|ENST00000355758|ZC3H7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7590942382812	2	516.759081	1031.50361	-0.67852	-0.00035063	0.71661	0.00037032	0.038093	1.9685E-05	516.7592664719426	30.583	0.66411	30.612	30.318	30.982	0.028618					36	14	4	0	0	0	0.43338	2	2009	1996;2009		55.504	2.1528	1	187500			14596	3218	10056	10065	16820;16821	16821					-0.010883045962373217
HPLEGTHEL	9	Unmodified	_HPLEGTHEL_					0	0	0		ENSG00000122299|ENST00000355758|ZC3H7A;ENST00000571676.5_1_16:11858892-11864657:-|nuORF	ENSG00000122299|ENST00000355758|ZC3H7A	ENSG00000122299|ENST00000355758|ZC3H7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7586059570312	2	516.759081	1031.50361	0.15247	7.8792E-05	-4.0708	-0.0021036	-3.9183	-0.0020248	516.7588467719305	30.725	0.73964	30.729	30.404	31.144	0.0037212					26	16	3	0	0	0	0.43338	1	2030	2030		55.504	6.0627	1	195780			14597	3218	10056	10065	16822	16822					-0.010883045962373217
HPLEYLRQY	9	Unmodified	_HPLEYLRQY_					0	0	0		ENSG00000137513|ENST00000281038|NARS2	ENSG00000137513|ENST00000281038|NARS2	ENSG00000137513|ENST00000281038|NARS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.8792419433594	3	406.880379	1217.61931	-2.1643	-0.00088061	-0.62606	-0.00025473	-2.7904	-0.0011353	406.88003973926544	18.414	0.41613	18.414	18.223	18.639	0					39	16	3	0	0	0	0.73802	1	307	307		37.812	1.4939	1	262240			14598	4210	10057	10066	16823	16823					0.019202192546117658
HPLFFLMKR	9	Unmodified	_HPLFFLMKR_					0	0	0		ENSG00000221937|ENST00000408947|TAS2R40	ENSG00000221937|ENST00000408947|TAS2R40	ENSG00000221937|ENST00000408947|TAS2R40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	594.8384399414062	2	594.839154	1187.66375	-0.22069	-0.00013127	-1.6175	-0.00096213	-1.8381	-0.0010934	594.8381332628321	69.679	0.59947	69.642	69.378	69.978	-0.036957					55	31	2	0	0	0	0.77546	1	6736	6736		31.955	0.42505	1	1810100			14599	8687	10058	10067	16824	16824					0.07742951867089687
HPLFTKGK	8	Unmodified	_HPLFTKGK_					0	0	0			REV__ENSG00000187105|ENST00000553558|HEATR4	REV__ENSG00000187105|ENST00000553558|HEATR4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2546691894531	2	464.27417	926.533787	-1.651	-0.00076652	-2.4541	-0.0011394	-4.1051	-0.0019059	464.2728266840547	85.587	1.3181	85.746	85.198	86.516	0.15851					46	30	2	0	0	0	0.4196	1	8309	8309		37.159	21.523	1	70397	+		14600	22904	10059	10068	16825	16825					0.06758098859609163
HPLGQRHI	8	Unmodified	_HPLGQRHI_					0	0	0		nc|ENSG00000143537|Q13444-13|ADAM15;nc|ENSG00000143537|Q13444-10|ADAM15;nc|ENSG00000143537|Q13444-9|ADAM15;nc|ENSG00000143537|Q13444-8|ADAM15;nc|ENSG00000143537|Q13444-2|ADAM15;nc|ENSG00000143537|Q13444-7|ADAM15;nc|ENSG00000143537|Q13444-6|ADAM15;nc|ENSG00000143537|Q13444-12|ADAM15;ENST00000461564.6_1_1:155023817-155033989:+|nuORF;nc|ENSG00000143537|Q13444-5|ADAM15;nc|ENSG00000143537|Q13444-4|ADAM15;ENST00000527418.5_1_1:155025082-155034975:+|nuORF;nc|ENSG00000143537|Q13444-3|ADAM15;ENSG00000143537|ENST00000356955|ADAM15;ENST00000480331.5_1_1:155023340-155028240:+|nuORF	nc|ENSG00000143537|Q13444-13|ADAM15	nc|ENSG00000143537|Q13444-13|ADAM15	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2778625488281	2	479.272493	956.530432	-1.6825	-0.00080636	0.25154	0.00012055	-1.4309	-0.0006858	479.27235244514173	97.761	0.52083	97.957	97.679	98.2	0.19585					19	11	2	0	0	0	0.4196	1	10030	10030		35.201	18.728	1	58041			14601	4642	10060	10069	16826	16826					0.05042848805612721
HPLHQPLCT	9	Carbamidomethyl (C)	_HPLHQPLC(Carbamidomethyl (C))T_	HPLHQPLC(1)T		HPLHQPLC(46)T		0	1	0			REV__ENST00000399627.3_1_22:50905837-50906184:-|nuORF	REV__ENST00000399627.3_1_22:50905837-50906184:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.777099609375	2	551.776751	1101.53895	0.77112	0.00042549	2.2413	0.0012367	3.0124	0.0016622	551.7773819026168	30.418	0.49939	30.403	30.164	30.663	-0.015167					22	12	2	0	0	0	0.62081	1	1603	1603		45.952	8.7928	1	79494	+		14602	26232	10061	10070	16827	16827	319				-0.0077596534008534945
HPLHYTVIMN	10	Unmodified	_HPLHYTVIMN_					0	0	0		ENSG00000127530|ENST00000641666|OR7C1;ENSG00000185385|ENST00000641113|OR7A17;ENSG00000174667|ENST00000641669|OR7D4	ENSG00000127530|ENST00000641666|OR7C1	ENSG00000127530|ENST00000641666|OR7C1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.8795166015625	2	612.813333	1223.61211	1.1719	0.00071815	0.8348	0.00051158	2.0067	0.0012297	612.8140920031501	104.31	0.46667	104.48	104.18	104.65	0.17096					22	11	3	0	0	0	0.37624	1	11052	11052		58.782	0.55203	1	375720			14603	3505	10062	10071	16828	16828					0.009251633825215322
HPLKGKKGF	9	Unmodified	_HPLKGKKGF_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30780029296875	2	506.308544	1010.60253	0.46799	0.00023695	0.70005	0.00035444	1.168	0.00059138	506.3090292156969	63.021	1.2614	63.143	62.591	63.852	0.12252					86	56	2	0	0	0	0.7932	1	5484	5484		19.36	0.25645	1	130540	+		14604	18336	10063	10072	16829	16829					0.09765763159339258
HPLLGLDLQS	10	Unmodified	_HPLLGLDLQS_					0	0	0			REV__ENST00000369660.8_1_X:153713618-153713780:-|nuORF	REV__ENST00000369660.8_1_X:153713618-153713780:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.9130859375	2	546.806031	1091.59751	-1.0851	-0.00059335	0.846	0.0004626	-0.23912	-0.00013075	546.8061814551103	27.375	0.6137	27.2	26.971	27.584	-0.17559					28	13	3	0	0	0	0.37624	1	1578	1578		29.15	1.2673	1	221710	+		14605	25626	10064	10073	16830	16830					0.05537414506034111
HPLLPALSAS	10	Unmodified	_HPLLPALSAS_					0	0	0		ENST00000550147.5_1_12:53899948-53900041:+|nuORF	ENST00000550147.5_1_12:53899948-53900041:+|nuORF	ENST00000550147.5_1_12:53899948-53900041:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	503.7917175292969	2	503.290017	1004.56548	0.80608	0.00040569	2.1927	0.0011036	2.9988	0.0015092	503.2909725186853	109.68	1.4053	109.76	109.44	110.85	0.078552					88	52	3	0	0	0	0.86589	1	11801	11801		29.15	0.89528	1	1533800			14606	13651	10065	10074	16831	16831					0.0633804682288428
HPLPQLSPL	9	Unmodified	_HPLPQLSPL_					0	0	0			REV__nc|ENSG00000231852|P08686-2|CYP21A2	REV__nc|ENSG00000231852|P08686-2|CYP21A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2899475097656	2	501.292559	1000.57057	-1.6108	-0.00080747	-2.0389	-0.0010221	-3.6496	-0.0018295	501.2913530153025	99.317	1.4862	99.503	99.074	100.56	0.18582					77	34	4	0	0	0	0.7932	1	10300	10300		24.203	1.1603	1	592170	+		14607	23764	10066	10075	16832	16832					0.07030350685522535
HPLPWHAAS	9	Unmodified	_HPLPWHAAS_					0	0	0			REV__ENSG00000180660|ENST00000379919|MAB21L1	REV__ENSG00000180660|ENST00000379919|MAB21L1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.8052062988281	2	508.259051	1014.50355	-0.39377	-0.00020014	0.38354	0.00019494	-0.010228	-5.1985E-06	508.7602610491546	90.089	0.42415	90.302	89.998	90.422	0.21272					11	9	2	0	0	0	0.20789	1	8971	8971		31.955	0	1	37833	+		14608	22408	10067	10076	16833	16833					-0.00312259805582471
HPLSDHEATL	10	Unmodified	_HPLSDHEATL_					0	0	0		nc|ENSG00000204525|P10321-2|HLA-C;ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF	nc|ENSG00000204525|P10321-2|HLA-C	nc|ENSG00000204525|P10321-2|HLA-C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.2750854492188	2	560.275095	1118.53564	-0.28701	-0.0001608	0.139	7.7878E-05	-0.14801	-8.2925E-05	560.2751555843804	31.019	1.2208	31.099	30.678	31.899	0.079834					51	27	2	0	0	0	8.5505E-06	6	2065	2042;2053;2065;2077;2090;2102		147.69	0	1	3071600			14609	8454	10068	10077	16834;16835;16836;16837;16838;16839	16836					-0.01888936913087491
HPLSDHEATL	10	Unmodified	_HPLSDHEATL_					0	0	0		nc|ENSG00000204525|P10321-2|HLA-C;ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF	nc|ENSG00000204525|P10321-2|HLA-C	nc|ENSG00000204525|P10321-2|HLA-C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.2741088867188	2	560.275095	1118.53564	0.36076	0.00020213	-0.65456	-0.00036673	-0.2938	-0.00016461	560.2747711476865	31.016	1.0752	31.02	30.667	31.742	0.0037212					48	24	2	0	0	0	0.0071309	6	2063	2063;2072;2083;2095;2108;2121		133.81	0	1	4095000			14610	8454	10068	10077	16840;16841;16842;16843;16844;16845	16840					-0.01888936913087491
HPLTPLITY	9	Unmodified	_HPLTPLITY_					0	0	0		nc|ENSG00000138795|Q9UJU2-4|LEF1;nc|ENSG00000148737|Q9NQB0-9|TCF7L2;nc|ENSG00000148737|Q9NQB0-3|TCF7L2;nc|ENSG00000148737|Q9NQB0-7|TCF7L2;nc|ENSG00000148737|Q9NQB0-5|TCF7L2;nc|ENSG00000148737|Q9NQB0-8|TCF7L2;ENSG00000152284|ENST00000282111|TCF7L1;nc|ENSG00000148737|Q9NQB0-16|TCF7L2;nc|ENSG00000148737|Q9NQB0-13|TCF7L2;nc|ENSG00000148737|Q9NQB0-2|TCF7L2;nc|ENSG00000148737|Q9NQB0-11|TCF7L2;nc|ENSG00000148737|Q9NQB0-6|TCF7L2;nc|ENSG00000148737|Q9NQB0-4|TCF7L2;nc|ENSG00000148737|Q9NQB0-12|TCF7L2;chr10:113125938-113141184|26|25.5|0.09|8.12|+|ENST00000349937|TCF7L2,TCF7L2;nc|ENSG00000148737|Q9NQB0-10|TCF7L2;nc|ENSG00000148737|Q9NQB0-15|TCF7L2;nc|ENSG00000148737|Q9NQB0-14|TCF7L2;ENSG00000138795|ENST00000265165|LEF1;nc|ENSG00000138795|Q9UJU2-6|LEF1;nc|ENSG00000138795|Q9UJU2-5|LEF1;nc|ENSG00000138795|Q9UJU2-2|LEF1;chr10:113129987-113141184|23|21.52|0.26|6.35|+|ENST00000637574|TCF7L2,TCF7L2;nc|ENSG00000138795|Q9UJU2-7|LEF1;chr10:113126881-113141184|35|52.66|0.21|7.97|+|ENST00000369389|TCF7L2,TCF7L2;nc|ENSG00000138795|Q9UJU2-3|LEF1;ENSG00000148737|ENST00000355995|TCF7L2	nc|ENSG00000138795|Q9UJU2-4|LEF1	nc|ENSG00000138795|Q9UJU2-4|LEF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.7996215820312	2	527.800217	1053.58588	-0.25076	-0.00013235	-1.5946	-0.00084162	-1.8453	-0.00097397	527.8000204208644	61.956	1.1426	62.344	61.957	63.099	0.38846					77	25	5	0	0	0	0.09311	3	6617	6606;6617;6629		94.006	35.224	1	495170			14611	62	10069	10078	16846;16847;16848	16847					0.06123217482718246
HPLTPLITY	9	Unmodified	_HPLTPLITY_					0	0	0		nc|ENSG00000138795|Q9UJU2-4|LEF1;nc|ENSG00000148737|Q9NQB0-9|TCF7L2;nc|ENSG00000148737|Q9NQB0-3|TCF7L2;nc|ENSG00000148737|Q9NQB0-7|TCF7L2;nc|ENSG00000148737|Q9NQB0-5|TCF7L2;nc|ENSG00000148737|Q9NQB0-8|TCF7L2;ENSG00000152284|ENST00000282111|TCF7L1;nc|ENSG00000148737|Q9NQB0-16|TCF7L2;nc|ENSG00000148737|Q9NQB0-13|TCF7L2;nc|ENSG00000148737|Q9NQB0-2|TCF7L2;nc|ENSG00000148737|Q9NQB0-11|TCF7L2;nc|ENSG00000148737|Q9NQB0-6|TCF7L2;nc|ENSG00000148737|Q9NQB0-4|TCF7L2;nc|ENSG00000148737|Q9NQB0-12|TCF7L2;chr10:113125938-113141184|26|25.5|0.09|8.12|+|ENST00000349937|TCF7L2,TCF7L2;nc|ENSG00000148737|Q9NQB0-10|TCF7L2;nc|ENSG00000148737|Q9NQB0-15|TCF7L2;nc|ENSG00000148737|Q9NQB0-14|TCF7L2;ENSG00000138795|ENST00000265165|LEF1;nc|ENSG00000138795|Q9UJU2-6|LEF1;nc|ENSG00000138795|Q9UJU2-5|LEF1;nc|ENSG00000138795|Q9UJU2-2|LEF1;chr10:113129987-113141184|23|21.52|0.26|6.35|+|ENST00000637574|TCF7L2,TCF7L2;nc|ENSG00000138795|Q9UJU2-7|LEF1;chr10:113126881-113141184|35|52.66|0.21|7.97|+|ENST00000369389|TCF7L2,TCF7L2;nc|ENSG00000138795|Q9UJU2-3|LEF1;ENSG00000148737|ENST00000355995|TCF7L2	nc|ENSG00000138795|Q9UJU2-4|LEF1	nc|ENSG00000138795|Q9UJU2-4|LEF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.800048828125	2	527.800217	1053.58588	0.077074	4.068E-05	-1.2257	-0.00064695	-1.1487	-0.00060627	527.7998583804642	61.832	1.4183	62.385	62.006	63.425	0.55386					78	32	6	0	0	0	0.39977	2	6622	6622;6646		57.811	13.694	1	590010			14612	62	10069	10078	16849;16850	16849					0.06123217482718246
HPLVAVGSIIT	11	Unmodified	_HPLVAVGSIIT_					0	0	0			REV__ENSG00000164151|ENST00000296564|ICE1	REV__ENSG00000164151|ENST00000296564|ICE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8300170898438	2	553.832049	1105.64954	-0.78325	-0.00043379	-2.053	-0.001137	-2.8362	-0.0015708	553.8307618175877	102.64	0.65639	102.65	102.39	103.05	0.0082016					47	15	4	0	0	0	0.75041	1	11013	11013		21.96	1.9631	1	552570	+		14613	21039	10070	10079	16851	16851					0.10094577919812764
HPLYTPPSF	9	Unmodified	_HPLYTPPSF_					0	0	0		ENSG00000205678|ENST00000381210|TECRL	ENSG00000205678|ENST00000381210|TECRL	ENSG00000205678|ENST00000381210|TECRL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.7699584960938	2	529.768917	1057.52328	-0.78285	-0.00041473	4.2842	0.0022696	3.5013	0.0018549	529.7708561271895	67.269	0.86028	67.321	67.009	67.869	0.052376					76	31	4	0	0	0	0.39977	1	5996	5996		57.811	1.0902	1	630540			14614	8536	10071	10080	16852	16852					-0.0031792858549124503
HPNDDDVHF	9	Unmodified	_HPNDDDVHF_					0	0	0		nc|ENSG00000114127|Q8IZH2-3|XRN1;ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1	nc|ENSG00000114127|Q8IZH2-3|XRN1	nc|ENSG00000114127|Q8IZH2-3|XRN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.228271484375	2	548.228145	1094.44174	-0.06766	-3.7093E-05	-0.010329	-5.6624E-06	-0.077989	-4.2756E-05	548.2279675015559	33.926	0.95065	34.136	33.778	34.728	0.21003					53	22	3	0	0	0	0.032438	3	2482	2470;2482;2495		116.9	58.122	1	759750			14615	2762	10072	10081	16853;16854;16855	16854					-0.10170656015384338
HPNDDDVHF	9	Unmodified	_HPNDDDVHF_					0	0	0		nc|ENSG00000114127|Q8IZH2-3|XRN1;ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1	nc|ENSG00000114127|Q8IZH2-3|XRN1	nc|ENSG00000114127|Q8IZH2-3|XRN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.2276611328125	2	548.228145	1094.44174	0.98821	0.00054177	-1.1903	-0.00065256	-0.20209	-0.00011079	548.2272956743595	33.856	0.90454	34.161	33.871	34.776	0.30494					57	21	3	0	0	0	0.062302	3	2506	2494;2506;2519		102.77	55.116	1	651000			14616	2762	10072	10081	16856;16857;16858	16857					-0.10170656015384338
HPNRPSLG	8	Unmodified	_HPNRPSLG_					0	0	0			REV__nc|ENSG00000250091|P0CZ25|DNAH10OS	REV__nc|ENSG00000250091|P0CZ25|DNAH10OS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2358093261719	2	439.235576	876.456599	-0.81334	-0.00035725	1.0235	0.00044957	0.21018	9.2317E-05	439.2359205926715	27.517	1.1763	27.341	26.971	28.147	-0.17559					58	26	5	0	0	0	0.85277	1	1608	1608		25.45	2.4077	1	693140	+		14617	30236	10073	10082	16859	16859					0.013428806432784768
HPPPLAPA	8	Unmodified	_HPPPLAPA_					0	0	0			REV__ENSG00000144711|ENST00000613206|IQSEC1	REV__ENSG00000144711|ENST00000613206|IQSEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.2247009277344	2	400.226688	798.438824	-0.40518	-0.00016216	-2.3309	-0.00093291	-2.7361	-0.0010951	400.2256113330208	16.522	0.22395	16.442	16.327	16.551	-0.080017					12	8	2	0	0	0	0.88393	1	124	124		33.493	8.989	1	101260	+		14618	15800	10074	10083	16860	16860					0.03154165388400543
HPPPRVLL	8	Unmodified	_HPPPRVLL_					0	0	0			REV__ENST00000392038.6_1_19:40738806-40739223:-|nuORF	REV__ENST00000392038.6_1_19:40738806-40739223:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7909851074219	2	464.789987	927.565421	-1.8726	-0.00087039	3.328	0.0015468	1.4553	0.00067641	464.79142205700754	36.889	1.6787	36.889	35.761	37.439	0					76	39	3	0	0	0	0.82464	1	2189	2189		21.702	6.0605	1	196040	+		14619	26014	10075	10084	16861	16861					0.09874091613551172
HPPPRVLL	8	Unmodified	_HPPPRVLL_					0	0	0			REV__ENST00000392038.6_1_19:40738806-40739223:-|nuORF	REV__ENST00000392038.6_1_19:40738806-40739223:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.79071044921875	2	464.789987	927.565421	-1.1356	-0.00052781	2.4608	0.0011438	1.3252	0.00061596	464.7910242247121	36.975	1.5496	36.999	36.145	37.695	0.023624					81	41	3	0	0	0	0.81548	1	2116	2116		20.482	0	1	297830	+		14620	26014	10075	10084	16862	16862					0.09874091613551172
HPPPSPGTLAG	11	Unmodified	_HPPPSPGTLAG_					0	0	0		ENST00000555123.5_1_14:73732143-73739271:+|nuORF	ENST00000555123.5_1_14:73732143-73739271:+|nuORF	ENST00000555123.5_1_14:73732143-73739271:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2251586914062	2	515.769448	1029.52434	0.15887	8.194E-05	0.060092	3.0994E-05	0.21896	0.00011293	515.7693080472917	52.077	0.3626	52.501	52.318	52.681	0.42348					13	8	2	0	0	0	0.15921	1	5198	5198		24.519	0	1	461630			14621	13730	10076	10085	16863	16863					0.010762857834379247
HPPTVVPAPG	10	Unmodified	_HPPTVVPAPG_					0	0	0			REV__ENST00000361813.5_1_1:156219960-156220356:-|nuORF	REV__ENST00000361813.5_1_1:156219960-156220356:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.26690673828125	2	486.269084	970.523616	-1.6066	-0.00078124	-2.3049	-0.0011208	-3.9115	-0.0019021	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.85934	1	8482	8482		35.618	0.46626	1	1531500	+		14622	25514	10077	10086	16864	16864					0.037174911343640815
HPQHLLVP	8	Unmodified	_HPQHLLVP_					0	0	0			REV__ENST00000372017.3_1_10:88722816-88722948:+|nuORF	REV__ENST00000372017.3_1_10:88722816-88722948:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7690734863281	2	470.771794	939.529036	-1.6346	-0.00076952	-4.1444	-0.0019511	-5.779	-0.0027206	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.90024	1	4036	4036		39.021	9.18	1	1359900	+		14623	25703	10078	10087	16865	16865					0.05685214716845621
HPRIITEGF	9	Unmodified	_HPRIITEGF_					0	0	0		ENST00000430443.1_1_3:190432916-190432991:+|nuORF;ENST00000419314.5_1_7:64498910-64527388:+|nuORF;nc|ENSG00000146731|P40227-2|CCT6A;ENSG00000146731|ENST00000275603|CCT6A	ENST00000430443.1_1_3:190432916-190432991:+|nuORF	ENST00000430443.1_1_3:190432916-190432991:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2955932617188	2	535.293091	1068.57163	-0.80207	-0.00042934	-2.0735	-0.0011099	-2.8756	-0.0015393	535.2918751559318	43.486	0.67779	43.936	43.644	44.322	0.45025					36	16	3	0	0	0	0.11055	2	3929	3929;3940		90.37	46.253	1	1095200			14624	4857	10079	10088	16866;16867	16866					0.04008565054414248
HPRIITEGF	9	Unmodified	_HPRIITEGF_					0	0	0		ENST00000430443.1_1_3:190432916-190432991:+|nuORF;ENST00000419314.5_1_7:64498910-64527388:+|nuORF;nc|ENSG00000146731|P40227-2|CCT6A;ENSG00000146731|ENST00000275603|CCT6A	ENST00000430443.1_1_3:190432916-190432991:+|nuORF	ENST00000430443.1_1_3:190432916-190432991:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2866821289062	2	535.293091	1068.57163	-2.0678	-0.0011069	-0.41874	-0.00022415	-2.4865	-0.001331	535.292752060832	43.244	0.83891	44.018	43.624	44.463	0.77379					40	20	3	0	0	0	0.11055	1	3915	3915		90.37	40.928	1	1064700			14625	4857	10079	10088	16868	16868					0.04008565054414248
HPRKLVYV	8	Unmodified	_HPRKLVYV_					0	0	0			REV__ENST00000464255.1_1_2:219265892-219269145:+|nuORF	REV__ENST00000464255.1_1_2:219265892-219269145:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.306396484375	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.568	1	54.56	54.06	55.06	-0.0077095								0	0	0	0.29199	1	4819	4819		29.842	1.5873	1		+		14626	19900	10080	10089	16869	16869					0.0976576315931652
HPRLHLHH	8	Unmodified	_HPRLHLHH_					0	0	0		chr8:37830923-37833010|15|11.13|0.11|6.62|+|0|ADGRA2,ADGRA2|1;chr8:37830923-37831461|14|11.14|0.35|4.98|+|0|ADGRA2,None|1	chr8:37830923-37833010|15|11.13|0.11|6.62|+|0|ADGRA2,ADGRA2|1	chr8:37830923-37833010|15|11.13|0.11|6.62|+|0|ADGRA2,ADGRA2|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7936401367188	2	523.791384	1045.56821	1.1929	0.00062481	3.5993	0.0018853	4.7922	0.0025101	523.7931742755334	19.706	1.4854	19.236	18.928	20.414	-0.46967					77	32	3	0	0	0	0.86791	1	547	547		28.254	1.4582	1	1002100			14627	515	10081	10090	16870	16870					0.04725359791086703
HPRRLQRTWSR	11	Unmodified	_HPRRLQRTWSR_					0	0	0			REV__ENST00000328914.4_1_7:4802101-4802248:+|nuORF	REV__ENST00000328914.4_1_7:4802101-4802248:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2826232910156	3	498.283392	1491.82835	-0.31448	-0.0001567	-1.1779	-0.00058692	-1.4924	-0.00074362	498.2827583965927	32.939	1.0568	33.109	32.764	33.821	0.16971					75	24	5	0	0	0	0.73621	1	2336	2336		25.126	1.7481	1	2943000	+		14628	25098	10082	10091	16871	16871					0.10210480331261351
HPSDPSALGPQ	11	Unmodified	_HPSDPSALGPQ_					0	0	0			REV__ENSG00000135097|ENST00000257552|MSI1	REV__ENSG00000135097|ENST00000257552|MSI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.2671508789062	2	553.26727	1104.51999	-0.82693	-0.00045751	0.68042	0.00037645	-0.14651	-8.1059E-05	553.2675507536138	27.578	0.87235	27.481	27.139	28.011	-0.096947					39	19	3	0	0	0	0.53361	1	1597	1597		49.536	3.5841	1	447490	+		14629	19193	10083	10092	16872	16872					-0.028092234301539065
HPSHEQII	8	Unmodified	_HPSHEQII_					0	0	0		ENSG00000039319|ENST00000505560|ZFYVE16;ENST00000512558.5_1_5:79729945-79747536:+|nuORF	ENSG00000039319|ENST00000505560|ZFYVE16	ENSG00000039319|ENST00000505560|ZFYVE16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.75408935546875	2	480.748516	959.482479	-0.2257	-0.0001085	-0.61512	-0.00029572	-0.84082	-0.00040422	480.74873116033785	32.573	0.34853	32.519	32.278	32.626	-0.05434					13	7	3	0	0	0	0.884	1	1920	1920		33.516	3.0119	1	25770			14630	922	10084	10093	16873	16873					0.0011173009490903496
HPSNVLHFF	9	Unmodified	_HPSNVLHFF_					0	0	0		ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781237-34781759:-|nuORF;ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000595164.5_1_19:39327364-39331218:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;nc|ENSG00000104824|P14866-2|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.2802734375	2	549.279983	1096.54541	-0.43293	-0.0002378	0.50979	0.00028002	0.076856	4.2215E-05	549.2800716128296	55.248	0.91612	55.649	55.323	56.239	0.40101					42	21	3	0	0	0	0.12652	2	5671	5657;5671		87.754	21.951	1	792190			14631	2151	10085	10094	16874;16875	16875					0.0010029588295310532
HPSNVLHFF	9	Unmodified	_HPSNVLHFF_					0	0	0		ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781237-34781759:-|nuORF;ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000595164.5_1_19:39327364-39331218:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;nc|ENSG00000104824|P14866-2|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.2809448242188	2	549.279983	1096.54541	-0.12344	-6.7802E-05	0.10275	5.6438E-05	-0.020689	-1.1364E-05	549.2799965909704	54.984	0.71378	55.552	55.278	55.992	0.56836					38	16	3	0	0	0	0.14386	2	5650	5650;5661		84.916	29.411	1	863210			14632	2151	10085	10094	16876;16877	16876					0.0010029588295310532
HPSPPPPLLA	10	Unmodified	_HPSPPPPLLA_					0	0	0		ENST00000505761.2_1_11:60784901-60785045:+|nuORF	ENST00000505761.2_1_11:60784901-60785045:+|nuORF	ENST00000505761.2_1_11:60784901-60785045:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.2930297851562	2	513.292559	1024.57057	0.0086847	4.4578E-06	-0.19134	-9.8214E-05	-0.18266	-9.3756E-05	513.2922610462236	53.709	0.62811	54.294	54.039	54.667	0.58474					35	14	3	0	0	0	0.6398	1	5463	5463		47.916	3.5384	1	614380			14633	12930	10086	10095	16878	16878					0.05926350685513171
HPTDDTTTL	9	Unmodified	_HPTDDTTTL_					0	0	0		ENST00000591716.6_1_19:35651643-35657154:+|nuORF;nc|ENSG00000089327|Q96DB9-2|FXYD5;ENSG00000089327|ENST00000392219|FXYD5	ENST00000591716.6_1_19:35651643-35657154:+|nuORF	ENST00000591716.6_1_19:35651643-35657154:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.7328186035156	2	500.732729	999.450904	-1.5362	-0.00076925	1.5346	0.00076842	-0.0016568	-8.2964E-07	500.73334402025296	30.737	0.79642	30.798	30.438	31.235	0.060919					41	17	3	0	0	0	0.053315	3	2037	2015;2023;2037		106.42	40.518	1	690980			14634	1622	10087	10096	16879;16880;16881	16881					-0.04884307449719927
HPTDDTTTL	9	Unmodified	_HPTDDTTTL_					0	0	0		ENST00000591716.6_1_19:35651643-35657154:+|nuORF;nc|ENSG00000089327|Q96DB9-2|FXYD5;ENSG00000089327|ENST00000392219|FXYD5	ENST00000591716.6_1_19:35651643-35657154:+|nuORF	ENST00000591716.6_1_19:35651643-35657154:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7325134277344	2	500.732729	999.450904	0.33553	0.00016801	-0.46897	-0.00023483	-0.13344	-6.6816E-05	500.7323481055169	30.848	0.7394	30.852	30.491	31.23	0.0037212					40	16	3	0	0	0	0.25826	2	2054	2054;2066		68.485	12.452	1	820900			14635	1622	10087	10096	16882;16883	16882					-0.04884307449719927
HPTIISESF	9	Unmodified	_HPTIISESF_					0	0	0		ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	ENSG00000115484|ENST00000394440|CCT4	ENSG00000115484|ENST00000394440|CCT4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.764404296875	2	515.763832	1029.51311	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.609	1	54.023	53.523	54.523	0.4139								0	0	0	0.033031	1	5422	5422		101.21	32.119	1				14636	2848	10088	10097	16884	16884					-0.00046536310719602625
HPTIISESF	9	Unmodified	_HPTIISESF_					0	0	0		ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	ENSG00000115484|ENST00000394440|CCT4	ENSG00000115484|ENST00000394440|CCT4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7640380859375	2	515.763832	1029.51311	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.691	1	54.105	53.605	54.605	0.4139								0	0	0	0.038793	1	5434	5434		94.006	17.16	1				14637	2848	10088	10097	16885	16885					-0.00046536310719602625
HPTIISESF	9	Unmodified	_HPTIISESF_					0	0	0		ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	ENSG00000115484|ENST00000394440|CCT4	ENSG00000115484|ENST00000394440|CCT4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.76416015625	2	515.763832	1029.51311	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.774	1	54.188	53.688	54.688	0.4139								0	0	0	0.053612	1	5446	5446		85.359	12.48	1				14638	2848	10088	10097	16886	16886					-0.00046536310719602625
HPTIISESF	9	Unmodified	_HPTIISESF_					0	0	0		ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	ENSG00000115484|ENST00000394440|CCT4	ENSG00000115484|ENST00000394440|CCT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.763916015625	2	515.763832	1029.51311	-0.15905	-8.2035E-05	-1.1802	-0.00060868	-1.3392	-0.00069071	515.7628304303221	53.471	0.83606	54.085	53.737	54.573	0.61436					47	19	3	0	0	0	0.027997	3	5419	5409;5419;5431		119.56	53.754	1	2061300			14639	2848	10088	10097	16887;16888;16889	16888					-0.00046536310719602625
HPTLVLPLV	9	Unmodified	_HPTLVLPLV_					0	0	0		ENSG00000149262|ENST00000534064|INTS4;ENST00000525268.2_1_11:77612547-77635854:-|nuORF;ENST00000587624.5_1_7:64601607-64646883:+|nuORF;nc|ENSG00000149262|Q96HW7-3|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF	ENSG00000149262|ENST00000534064|INTS4	ENSG00000149262|ENST00000534064|INTS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.8106384277344	2	494.813128	987.611703	2.8519	0.0014111	-4.1917	-0.0020741	-1.3398	-0.00066295	494.8108568155047	109.87	1.4444	109.84	109.74	111.18	-0.027634					87	49	2	0	0	0	0.64338	1	12168	12168		44.531	17.735	1	253010			14640	5011	10089	10098	16890	16890					0.11740111724998314
HPTSVTVTW	9	Unmodified	_HPTSVTVTW_					0	0	0		nc|ENSG00000211898|P01880-1|IGHD;nc|ENSG00000211898|P01880|IGHD	nc|ENSG00000211898|P01880-1|IGHD	nc|ENSG00000211898|P01880-1|IGHD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.26416015625	2	514.263999	1026.51345	0.67038	0.00034475	-0.65869	-0.00033874	0.011686	6.0099E-06	514.2634451970073	50.239	0.78304	50.686	50.348	51.131	0.44761					49	18	4	0	0	0	0.39977	2	4943	4922;4943		57.811	2.3071	1	1926100			14641	15241	10090	10099	16891;16892	16892					0.001248834091484241
HPTSVTVTW	9	Unmodified	_HPTSVTVTW_					0	0	0		nc|ENSG00000211898|P01880-1|IGHD;nc|ENSG00000211898|P01880|IGHD	nc|ENSG00000211898|P01880-1|IGHD	nc|ENSG00000211898|P01880-1|IGHD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.2637939453125	2	514.263999	1026.51345	1.0382	0.0005339	-0.91003	-0.000468	0.12816	6.5906E-05	514.2632555744982	50.06	0.90005	50.905	50.395	51.295	0.84501					54	21	4	0	0	0	0.25826	1	4915	4915		68.485	17.292	1	2140300			14642	15241	10090	10099	16893	16893					0.001248834091484241
HPVAVPSESTI	11	Unmodified	_HPVAVPSESTI_					0	0	0		nc|ENSG00000065029|P36508-2|ZNF76;ENSG00000065029|ENST00000373953|ZNF76;ENST00000491400.5_1_6:35248907-35255958:+|nuORF;ENST00000486891.5_1_6:35248907-35259582:+|nuORF	nc|ENSG00000065029|P36508-2|ZNF76	nc|ENSG00000065029|P36508-2|ZNF76	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.7979736328125	2	568.800946	1135.58734	1.1634	0.00066175	-1.1615	-0.00066064	0.0019441	1.1058E-06	568.7999624316195	57.938	0.771	58.491	58.151	58.922	0.55323					50	18	4	0	0	0	0.40756	1	6093	6093		58.782	7.5893	1	1914600			14643	1117	10091	10100	16894	16894					0.024968067808231353
HPVFQQESF	9	Unmodified	_HPVFQQESF_					0	0	0		ENSG00000170430|ENST00000651593|MGMT	ENSG00000170430|ENST00000651593|MGMT	ENSG00000170430|ENST00000651593|MGMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.2717895507812	2	559.766906	1117.51926	0.29583	0.0001656	1.5129	0.00084689	1.8088	0.0010125	560.2695000095666	49.264	0.73626	49.724	49.419	50.155	0.45983					26	17	2	0	0	0	0.19818	2	4785	4785;4797		74.255	24.813	1	768700			14644	6588	10092	10101	16895;16896	16895					-0.03480018079198999
HPVFQQESF	9	Unmodified	_HPVFQQESF_					0	0	0		ENSG00000170430|ENST00000651593|MGMT	ENSG00000170430|ENST00000651593|MGMT	ENSG00000170430|ENST00000651593|MGMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.2696533203125	2	559.766906	1117.51926	0.5211	0.00029169	1.5062	0.00084309	2.0273	0.0011348	560.2694113681365	49.108	0.72747	50.013	49.686	50.413	0.90424					30	17	2	0	0	0	0.25483	1	4780	4780		68.787	12.066	1	684970			14645	6588	10092	10101	16897	16897					-0.03480018079198999
HPVKIGDLF	9	Unmodified	_HPVKIGDLF_					0	0	0		ENST00000476117.1_1_7:104800923-104844162:-|nuORF;nc|ENSG00000135250|P78362|SRPK2;ENSG00000135250|ENST00000393651|SRPK2	ENST00000476117.1_1_7:104800923-104844162:-|nuORF	ENST00000476117.1_1_7:104800923-104844162:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.2922973632812	2	513.292559	1024.57057	0.64978	0.00033353	-0.70765	-0.00036323	-0.057867	-2.9703E-05	513.2920770717417	53.93	0.66996	54.344	54.077	54.747	0.4139					32	15	3	0	0	0	0.67345	1	5471	5471		42.396	2.338	1	720140			14646	3996	10093	10102	16898	16898					0.059263506854904335
HPVPPGLPN	9	Unmodified	_HPVPPGLPN_					0	0	0			REV__ENSG00000162613|ENST00000370768|FUBP1	REV__ENSG00000162613|ENST00000370768|FUBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25384521484375	2	464.255977	926.497401	-1.0566	-0.00049054	-3.1539	-0.0014642	-4.2105	-0.0019547	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.76996	1	8329	8329		33.516	1.5607	1	1603800	+		14647	20826	10094	10103	16899	16899					0.03121221962896925
HPVPQPLQSF	10	Unmodified	_HPVPQPLQSF_					0	0	0		ENSG00000204103|ENST00000373313|MAFB	ENSG00000204103|ENST00000373313|MAFB	ENSG00000204103|ENST00000373313|MAFB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.3062744140625	2	575.306198	1148.59784	-0.14311	-8.233E-05	-0.012662	-7.2847E-06	-0.15577	-8.9614E-05	575.3060007215923	54.68	1.2977	55.086	54.615	55.913	0.40663					85	30	4	0	0	0	0.081281	6	5578	5543;5555;5566;5578;5590;5602		104.06	33.759	1	3293600			14648	8412	10095	10104	16900;16901;16902;16903;16904;16905	16903					0.029488342258900957
HPVPQPLQSF	10	Unmodified	_HPVPQPLQSF_					0	0	0		ENSG00000204103|ENST00000373313|MAFB	ENSG00000204103|ENST00000373313|MAFB	ENSG00000204103|ENST00000373313|MAFB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.3065795898438	2	575.306198	1148.59784	-0.63479	-0.0003652	0.48351	0.00027817	-0.15128	-8.703E-05	575.3063061849159	54.51	1.173	55.095	54.626	55.799	0.58474					80	27	4	0	0	0	0.062066	6	5586	5538;5551;5562;5574;5586;5598		107.01	29.69	1	3349900			14649	8412	10095	10104	16906;16907;16908;16909;16910;16911	16910					0.029488342258900957
HPVPRASKT	9	Unmodified	_HPVPRASKT_					0	0	0		ENST00000397077.5_2_3:10575756-10661627:-|nuORF	ENST00000397077.5_2_3:10575756-10661627:-|nuORF	ENST00000397077.5_2_3:10575756-10661627:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.2676086425781	2	496.785433	991.556313	-1.0907	-0.00054187	2.7416	0.001362	1.6509	0.00082014	496.7858808094332	27.826	0.4417	27.729	27.532	27.974	-0.096947					17	9	3	0	0	0	0.20789	1	1633	1633		29.15	13.508	1	81689			14650	11136	10096	10105	16912	16912					0.0601969825723927
HPVQTRARA	9	Unmodified	_HPVQTRARA_					0	0	0			REV__ENST00000370355.2_1_10:102122728-102122854:+|nuORF	REV__ENST00000370355.2_1_10:102122728-102122854:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.2947387695312	2	518.293956	1034.57336	0.66588	0.00034512	2.5424	0.0013177	3.2083	0.0016628	518.2951496195443	77.091	0.75919	77.491	77.295	78.054	0.39969					39	18	3	0	0	0	0.55097	1	8754	8754		49.442	4.9105	1	829730	+		14651	25654	10097	10106	16913	16913					0.057456188630339966
HPVRKLFQKFK	11	Unmodified	_HPVRKLFQKFK_					0	0	0		ENSG00000140015|ENST00000322893|KCNH5	ENSG00000140015|ENST00000322893|KCNH5	ENSG00000140015|ENST00000322893|KCNH5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6240539550781	3	476.625984	1426.85612	-1.6911	-0.000806	-3.0916	-0.0014735	-4.7826	-0.0022795	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.80593	1	12269	12269		10.104	0.45776	1	2577100			14652	4410	10098	10107	16914	16914					0.1597699053877477
HPWKACVAL	9	Unmodified	_HPWKACVAL_					0	0	0		ENST00000487093.5_1_3:51575631-51661706:+|nuORF	ENST00000487093.5_1_3:51575631-51661706:+|nuORF	ENST00000487093.5_1_3:51575631-51661706:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.7753295898438	2	512.77348	1023.53241	-1.2377	-0.00063467	3.5589	0.0018249	2.3212	0.0011903	512.7751433010892	35.87	0.64272	35.879	35.568	36.211	0.0092812					22	13	2	0	0	0	0.5393	1	2284	2284		50.025	11.218	1	44215			14653	12595	10099	10108	16915	16915					0.021581414991942438
HPWKACVAL	9	Unmodified	_HPWKACVAL_					0	0	0		ENST00000487093.5_1_3:51575631-51661706:+|nuORF	ENST00000487093.5_1_3:51575631-51661706:+|nuORF	ENST00000487093.5_1_3:51575631-51661706:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	512.77348	1023.53241	-0.0073855	-3.7871E-06	1.9337	0.00099155	1.9263	0.00098776	512.7744664378283	35.836	0.50348	35.824	35.654	36.157	-0.012203	-0.14866	-0.0022602	NaN	50.025	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47740			14654	12595	10099	10108							0.021581414991942438
HPWKACVAL	9	Unmodified	_HPWKACVAL_					0	0	0		ENST00000487093.5_1_3:51575631-51661706:+|nuORF	ENST00000487093.5_1_3:51575631-51661706:+|nuORF	ENST00000487093.5_1_3:51575631-51661706:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	512.77348	1023.53241	0.23266	0.0001193	4.9888	0.0025581	5.2215	0.0026774	513.2791294185747	36.166	0.13595	36.269	36.177	36.313	0.10306	0.29628	0.00087292	NaN	50.025	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19382			14655	12595	10099	10108							0.021581414991942438
HPWPHPLPVR	10	Unmodified	_HPWPHPLPVR_					0	0	0			REV__ENST00000480897.5_1_1:227921262-227921628:+|nuORF	REV__ENST00000480897.5_1_1:227921262-227921628:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.3457641601562	2	618.343449	1234.67235	0.89263	0.00055195	3.0862	0.0019083	3.9788	0.0024603	618.3452359789501	97.829	3.1632	97.989	96.92	100.08	0.16073					214	73	4	0	0	0	0.86452	1	10203	10203		30.504	4.9296	1	874220	+		14656	27427	10100	10109	16916	16916					0.06439641827910236
HPWRQVCD	8	Unmodified	_HPWRQVCD_					0	0	0		nc|ENSG00000165583|O60225-2|SSX5	nc|ENSG00000165583|O60225-2|SSX5	nc|ENSG00000165583|O60225-2|SSX5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.2810668945312	2	520.740168	1039.46578	-0.35042	-0.00018248	4.0752	0.0021221	3.7247	0.0019396	520.7420942955276	46.866	0.551	47.337	47.099	47.65	0.4714					18	12	2	0	0	0	0.4196	1	4410	4410		44.531	28.889	1	494990			14657	15068	10101	10110	16917	16917					-0.05237094062704273
HPWSLPLLAL	10	Unmodified	_HPWSLPLLAL_					0	0	0			REV__ENST00000564777.5_1_15:74281135-74282785:-|nuORF	REV__ENST00000564777.5_1_15:74281135-74282785:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.84326171875	2	573.837134	1145.65972	0.29584	0.00016977	-3.9562	-0.0022702	-3.6603	-0.0021004	573.8347374899391	17.108	0.18008	16.498	16.386	16.567	-0.6107					6	3	2	0	0	0	0.37624	1	216	216		29.15	10.887	1	67624	+		14658	28845	10102	10111	16918	16918					0.09271185645047808
HQALHAPQ	8	Unmodified	_HQALHAPQ_					0	0	0			REV__ENSG00000196263|ENST00000308031|ZNF471	REV__ENSG00000196263|ENST00000308031|ZNF471	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.7742004394531	2	451.235576	900.456599	-0.084104	-3.7951E-05	-0.94442	-0.00042616	-1.0285	-0.00046411	451.2349896856129	22.559	0.92288	22.14	21.652	22.575	-0.41879					35	20	2	0	0	0	0.4196	1	859	859		12.959	7.0381	1	141280	+		14659	23108	10103	10112	16919	16919					0.002388806432804813
HQALHAPQ	8	Unmodified	_HQALHAPQ_					0	0	0			REV__ENSG00000196263|ENST00000308031|ZNF471	REV__ENSG00000196263|ENST00000308031|ZNF471	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	451.235576	900.456599	0.43742	0.00019738	-1.5752	-0.0007108	-1.1378	-0.00051342	451.234713652761	22.664	0.78923	22.053	21.672	22.461	-0.6107	-0.043642	-0.00021318	NaN	25.45	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	169140	+		14660	23108	10103	10112							0.002388806432804813
HQASCLDLLY	10	Unmodified	_HQASCLDLLY_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.7794799804688	2	581.781699	1161.54884	-0.59621	-0.00034686	-3.0503	-0.0017746	-3.6465	-0.0021215	581.7797705002921	44.598	1.006	44.564	44.226	45.232	-0.033474					54	22	3	0	0	0	0.30722	1	3545	3545		71.877	7.6702	1	703860	+		14661	21648	10104	10113	16920	16920					-0.025468221253504453
HQCEHVAI	8	Unmodified	_HQCEHVAI_					0	0	0			REV__nc|ENSG00000169884|O00744-2|WNT10B	REV__nc|ENSG00000169884|O00744-2|WNT10B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72369384765625	2	468.721444	935.428335	1.3522	0.00063381	2.4637	0.0011548	3.8159	0.0017886	468.72262841523417	99.997	1.1906	100.33	99.811	101	0.33295					64	29	4	0	0	0	0.884	1	12079	12079		33.516	1.5607	1	1305900	+		14662	21611	10105	10114	16921	16921					-0.041961853283282835
HQCELCPLP	9	Carbamidomethyl (C)	_HQCELC(Carbamidomethyl (C))PLP_	HQCELC(1)PLP		HQC(-40)ELC(40)PLP		0	1	0		ENSG00000138829|ENST00000262464|FBN2	ENSG00000138829|ENST00000262464|FBN2	ENSG00000138829|ENST00000262464|FBN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.7489624023438	2	548.749344	1095.48414	0.039064	2.1437E-05	-0.7429	-0.00040766	-0.70383	-0.00038623	548.7488171682446	53.675	0.83237	53.65	53.272	54.104	-0.024754					52	19	4	0	0	0	0.28875	1	4822	4822		65.803	16.362	2	838800			14663	4340	10106	10115	16922	16922	56				-0.059787202030292974
HQCELCPLP	9	Carbamidomethyl (C)	_HQCELC(Carbamidomethyl (C))PLP_	HQCELC(1)PLP		HQC(-39)ELC(39)PLP		0	1	0		ENSG00000138829|ENST00000262464|FBN2	ENSG00000138829|ENST00000262464|FBN2	ENSG00000138829|ENST00000262464|FBN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.748779296875	2	548.749344	1095.48414	0.25472	0.00013977	-0.96636	-0.00053029	-0.71164	-0.00039051	548.7486872992919	53.73	0.90979	53.753	53.357	54.267	0.022541					60	24	4	0	0	0	0.31972	1	4746	4746		63.306	6.5852	2	884920			14664	4340	10106	10115	16923	16923	56				-0.059787202030292974
HQDLLRLLA	9	Unmodified	_HQDLLRLLA_					0	0	0			REV__ENSG00000197265|ENST00000355904|GTF2E2	REV__ENSG00000197265|ENST00000355904|GTF2E2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.8223876953125	2	539.822015	1077.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.076	1	40.444	39.944	40.944	0.36797								0	0	0	0.29475	1	3395	3395		32.812	4.9302	1		+		14665	23214	10107	10116	16924	16924					0.09376826979860198
HQGCCQLTKQ	10	Unmodified	_HQGCCQLTKQ_					0	0	0			REV__ENSG00000231738|ENST00000532498|TSPAN19	REV__ENSG00000231738|ENST00000532498|TSPAN19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.2615356445312	2	573.26315	1144.51175	-1.1382	-0.00065251	-2.8072	-0.0016093	-3.9454	-0.0022618	573.2609463595414	38.933	1.4364	38.944	38.036	39.472	0.011173					47	33	2	0	0	0	0.80179	1	2745	2745		39.253	0.44669	1	58742	+		14666	23763	10108	10117	16925	16925					-0.05472816942778991
HQGGERVFKNQ	11	Unmodified	_HQGGERVFKNQ_					0	0	0		nc|ENSG00000249948|Q9H227-2|GBA3;nc|ENSG00000249948|Q9H227|GBA3	nc|ENSG00000249948|Q9H227-2|GBA3	nc|ENSG00000249948|Q9H227-2|GBA3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.23883056640625	3	433.889937	1298.64798	-1.5946	-0.00069189	-3.4405	-0.0014928	-5.0351	-0.0021847	433.88936209296463	76.382	0.73495	76.507	76.027	76.762	0.12486					28	22	2	0	0	0	0.17586	1	7166	7166		16.53	0	1	33863			14667	15287	10109	10118	16926	16926					0.01060336883756463
HQGGSNSH	8	Unmodified	_HQGGSNSH_					0	0	0		ENST00000599157.5_1_19:49316949-49335986:-|nuORF	ENST00000599157.5_1_19:49316949-49335986:-|nuORF	ENST00000599157.5_1_19:49316949-49335986:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.1756896972656	2	412.175715	822.336878	-0.18655	-7.6891E-05	0.2492	0.00010271	0.062651	2.5823E-05	412.17579267785936	95.368	1.8182	95.435	94.838	96.656	0.066727					99	42	3	0	0	0	0.91977	1	10019	10019		45.952	10.751	1	1871100			14668	14371	10110	10119	16927	16927					-0.0813973270128372
HQGRGRARHR	10	Unmodified	_HQGRGRARHR_					0	0	0			REV__ENST00000555857.1_1_12:57482878-57485042:+|nuORF	REV__ENST00000555857.1_1_12:57482878-57485042:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	410.8973388671875	3	410.89776	1229.67145	2.85	0.0011711	2.7209	0.001118	5.5709	0.0022891	410.89886817490543	22.825	0.68475	22.775	22.569	23.254	-0.050077					37	23	2	0	0	0	0.86621	1	709	709		26.063	1.8316	1	42510	+		14669	28689	10111	10120	16928	16928					0.06580240231573953
HQHHHCLPH	9	Unmodified	_HQHHHCLPH_					0	0	0			REV__ENST00000358654.2_2_22:24829272-24829671:+|nuORF	REV__ENST00000358654.2_2_22:24829272-24829671:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.76513671875	2	573.262133	1144.50971	-0.81725	-0.0004685	-1.9111	-0.0010956	-2.7283	-0.0015641	573.2606455106544	39.193	1.2813	39.163	38.412	39.694	-0.03027					38	29	2	0	0	0	0.20789	1	2615	2615		35.201	0	1	57273	+		14670	25438	10112	10121	16929	16929					-0.056760648457157004
HQIAEFQRRYS	11	Unmodified	_HQIAEFQRRYS_					0	0	0			REV__ENST00000602629.1_1_2:171225816-171400468:+|nuORF	REV__ENST00000602629.1_1_2:171225816-171400468:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.6585693359375	3	478.912742	1433.7164	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.95	1	74.081	73.581	74.581	0.13126								0	0	0	0.56276	1	6823	6823		28.577	6.0151	1		+		14671	16631	10113	10122	16930	16930					0.01688581463599803
HQIDKWLVWYK	11	Unmodified	_HQIDKWLVWYK_					0	0	0			REV__ENSG00000119403|ENST00000373896|PHF19	REV__ENSG00000119403|ENST00000373896|PHF19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.93988037109375	3	505.94175	1514.80342	-0.92219	-0.00046657	-2.7794	-0.0014062	-3.7016	-0.0018728	505.9402761818825	62.204	1.4325	62.592	62.229	63.662	0.38845					93	32	5	0	0	0	0.67762	1	6675	6675		35.178	11.8	1	1337800	+		14672	18352	10114	10123	16931	16931					0.06660987685313557
HQIHRRVRIGR	11	Unmodified	_HQIHRRVRIGR_					0	0	0			REV__ENSG00000066279|ENST00000367409|ASPM	REV__ENSG00000066279|ENST00000367409|ASPM	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.62554931640625	3	476.623748	1426.84942	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.12	1	119.14	118.64	119.64	0.026466								0	0	0	0.56276	1	13114	13114		9.2118	0.41249	1		+		14673	16520	10115	10124	16932	16932					0.1530649043077119
HQITKDKRSL	10	Unmodified	_HQITKDKRSL_					0	0	0			REV__ENSG00000188419|ENST00000357749|CHM	REV__ENSG00000188419|ENST00000357749|CHM	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	612.8794555664062	2	613.354211	1224.69387	-0.12206	-7.4864E-05	0.27992	0.00017169	0.15786	9.6823E-05	613.3548904179161	104.81	0.24817	104.81	104.62	104.87	0					6	5	2	0	0	0	0.37624	1	10784	10784		25.574	0	1	82274	+		14674	23002	10116	10125	16933	16933					0.09050982065991775
HQITKDKRSLA	11	Unmodified	_HQITKDKRSLA_					0	0	0			REV__ENSG00000188419|ENST00000357749|CHM	REV__ENSG00000188419|ENST00000357749|CHM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.872802734375	2	648.872768	1295.73098	2.3415	0.0015193	-3.4932	-0.0022666	-1.1517	-0.0007473	648.8704740715605	99.639	2.1468	99.585	98.646	100.79	-0.053734					125	49	3	0	0	0	0.72106	1	10789	10789		28.081	0.19925	1	323740	+		14675	23002	10117	10126	16934	16934					0.09494653611773174
HQIVMLLHLL	10	Unmodified	_HQIVMLLHLL_					0	0	0			REV__ENST00000509268.1_1_5:82400826-82406918:+|nuORF	REV__ENST00000509268.1_1_5:82400826-82406918:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24786376953125	3	406.246005	1215.71618	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.91	1	113.93	113.43	114.43	0.027321								0	0	0	0.45132	1	12459	12459		29.17	7.4843	1		+		14676	27938	10118	10127	16935	16935					0.11695490210081516
HQKDREDQ	8	Unmodified	_HQKDREDQ_					0	0	0		nc|ENSG00000133454|Q8IUG5-2|MYO18B;ENSG00000133454|ENST00000335473|MYO18B;nc|ENSG00000133454|Q8IUG5-3|MYO18B	nc|ENSG00000133454|Q8IUG5-2|MYO18B	nc|ENSG00000133454|Q8IUG5-2|MYO18B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.2903442382812	2	528.246869	1054.47918	0.067014	3.54E-05	-4.3362	-0.0022906	-4.2691	-0.0022552	528.2444353505036	52.703	0.70402	53.318	53.033	53.737	0.61436					22	16	2	0	0	0	0.4196	1	5359	5359		25.574	0	1	323020			14677	3879	10119	10128	16936	16936					-0.04587564749772355
HQKIHNINKT	10	Unmodified	_HQKIHNINKT_					0	0	0		ENSG00000180626|ENST00000575779|ZNF594	ENSG00000180626|ENST00000575779|ZNF594	ENSG00000180626|ENST00000575779|ZNF594	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.5841064453125	3	411.566794	1231.67855	2.5916	0.0010666	-0.80807	-0.00033258	1.7836	0.00073405	411.566793322437	25.783	0.25349	25.352	25.272	25.525	-0.4311					7	5	2	0	0	0	0.37624	1	1370	1370		45.022	30.329	1	44647			14678	7337	10120	10129	16937	16937					0.07198115268784022
HQKKLDSLVLS	11	Unmodified	_HQKKLDSLVLS_					0	0	0		ENST00000463420.1_1_3:151488357-151501931:+|nuORF	ENST00000463420.1_1_3:151488357-151501931:+|nuORF	ENST00000463420.1_1_3:151488357-151501931:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.376708984375	2	634.372069	1266.72959	6.8506	0.0043458	0.67679	0.00042934	7.5274	0.0047751	634.3723115389404	111.82	0.6669	111.85	111.67	112.34	0.032715					57	24	4	0	0	0	0.70737	1	13576	13576		30.318	1.1682	1	3829000			14679	12063	10121	10130	16938	16938					0.10689019522988019
HQKKLQRSVTK	11	Unmodified	_HQKKLQRSVTK_					0	0	0		ENST00000392370.7_1_2:188245198-188245490:-|nuORF	ENST00000392370.7_1_2:188245198-188245490:-|nuORF	ENST00000392370.7_1_2:188245198-188245490:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.7781677246094	3	451.608882	1351.80482	1.4169	0.00063989	-1.8497	-0.00083534	-0.43277	-0.00019544	451.6080735640121	27.586	0.59776	27.332	26.945	27.543	-0.25465					20	13	2	0	0	0	0.1767	1	1615	1615		5.6988	0	1	72176			14680	11018	10122	10131	16939	16939					0.1429862177405994
HQKLIFQGTLD	11	Unmodified	_HQKLIFQGTLD_					0	0	0			REV__ENST00000296657.6_1_5:10653441-10653774:+|nuORF	REV__ENST00000296657.6_1_5:10653441-10653774:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.2554626464844	3	433.906705	1298.69829	-1.8278	-0.00079309	1.1357	0.00049278	-0.6921	-0.00030031	434.2410267513248	107.17	0.35859	107.21	106.89	107.25	0.036125					9	8	2	0	0	0	0.17365	1	11414	11414		21.032	1.7696	1	265370	+		14681	24720	10123	10132	16940	16940					0.06088446488911359
HQKSARHRPP	10	Unmodified	_HQKSARHRPP_					0	0	0		ENSG00000130711|ENST00000253008|PRDM12	ENSG00000130711|ENST00000253008|PRDM12	ENSG00000130711|ENST00000253008|PRDM12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.2278747558594	3	405.226883	1212.65882	-1.9262	-0.00078053	2.275	0.0009219	0.34886	0.00014137	405.22779901784565	27.286	0.62692	27.354	27.093	27.72	0.068678					56	30	3	0	0	0	0.86621	1	1073	1073		26.063	0	1	87420			14682	3669	10124	10133	16941	16941					0.06099784048683432
HQKSRYLTKL	10	Unmodified	_HQKSRYLTKL_					0	0	0			REV__ENSG00000154240|ENST00000535342|CEP112	REV__ENSG00000154240|ENST00000535342|CEP112	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	637.368896484375	2	637.372404	1272.73025	1.4683	0.00093584	-4.4237	-0.0028195	-2.9554	-0.0018837	637.3694673985003	105.74	2.5255	105.78	104.95	107.48	0.038322					168	59	4	0	0	0	0.8651	1	11570	11570		25.574	2.0514	1	1651800	+		14683	20375	10125	10134	16942	16942					0.10479858962685284
HQKTVLGP	8	Unmodified	_HQKTVLGP_					0	0	0		ENSG00000121057|ENST00000337714|AKAP1;nc|ENSG00000121057|Q92667-2|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2552185058594	2	440.255977	878.497401	0.40701	0.00017919	-1.6183	-0.00071247	-1.2113	-0.00053328	440.25507557275375	63.556	1.6285	64.111	63.598	65.226	0.55449					91	38	4	0	0	0	0.87479	1	6803	6803		30.504	8.5438	1	1465000			14684	3163	10126	10135	16943	16943					0.05329221962892916
HQKVLSSLSET	11	Unmodified	_HQKVLSSLSET_					0	0	0			REV__ENSG00000154265|ENST00000392676|ABCA5	REV__ENSG00000154265|ENST00000392676|ABCA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	410.2236328125	3	410.222582	1227.64592	1.9929	0.00081755	-0.67414	-0.00027655	1.3188	0.000541	410.2222331024821	24.748	0.84428	24.234	23.968	24.812	-0.51365					46	18	4	0	0	0	0.75121	1	1247	1247		21.78	2.8141	1	209910	+		14685	20379	10127	10136	16944	16944					0.04119863355299458
HQKVVKLHTK	10	Unmodified	_HQKVVKLHTK_					0	0	0		ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.587646484375	3	406.587418	1216.74043	2.8188	0.0011461	-2.2251	-0.00090468	0.5937	0.00024139	406.58643454203246	24.703	1.6586	24.666	24.201	25.86	-0.037178					110	42	4	0	0	0	0.86621	1	906	906		26.063	0	1	337090			14686	1034	10128	10137	16945	16945					0.1407246668791231
HQLAQSTQS	9	Unmodified	_HQLAQSTQS_					0	0	0			REV__ENST00000475066.1_1_7:154759501-154775093:-|nuORF	REV__ENST00000475066.1_1_7:154759501-154775093:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.245849609375	2	500.246338	998.478122	0.40098	0.00020059	-0.73816	-0.00036926	-0.33719	-0.00016868	500.24573835289385	28.587	0.57655	28.623	28.367	28.944	0.03607					28	19	2	0	0	0	0.76764	1	1364	1364		34.173	0.25091	1	39891	+		14687	20534	10129	10138	16946	16946					-0.0211777911866875
HQLGLGGK	8	Unmodified	_HQLGLGGK_					0	0	0		nc|ENSG00000171502|Q17RW2-2|COL24A1;ENSG00000171502|ENST00000370571|COL24A1	nc|ENSG00000171502|Q17RW2-2|COL24A1	nc|ENSG00000171502|Q17RW2-2|COL24A1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.23529052734375	2	405.235045	808.455536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.777	1	25.84	25.34	26.34	0.063122								0	0	0	0.29816	1	952	952		38.806	3.6054	1				14688	6675	10130	10139	16947	16947					0.04364666274375395
HQLIRTAQKI	10	Unmodified	_HQLIRTAQKI_					0	0	0			REV__ENSG00000172244|ENST00000306862|C5orf34	REV__ENSG00000172244|ENST00000306862|C5orf34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2467956542969	3	403.247173	1206.71969	0.73411	0.00029603	-1.4803	-0.00059692	-0.74617	-0.00030089	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.85251	1	11087	11087		31.634	0	1	18617000	+		14689	21814	10131	10140	16948	16948					0.12459876308275852
HQLKRFKALNV	11	Unmodified	_HQLKRFKALNV_					0	0	0			REV__ENSG00000264424|ENST00000255381|MYH4	REV__ENSG00000264424|ENST00000255381|MYH4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.2789611816406	3	451.941973	1352.80409	-1.6861	-0.00076203	4.482	0.0020256	2.7959	0.0012636	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.76892	1	4561	4561		17.833	3.7471	1	792670	+		14690	23957	10132	10141	16949	16949					0.14179827125030897
HQLLFAAL	8	Unmodified	_HQLLFAAL_					0	0	0			REV__ENSG00000167207|ENST00000647318|NOD2	REV__ENSG00000167207|ENST00000647318|NOD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.76788330078125	2	456.76872	911.522887	-0.35435	-0.00016185	-2.3484	-0.0010727	-2.7027	-0.0012345	456.76747065497955	16.53	0.35999	16.45	16.299	16.659	-0.080017					24	14	3	0	0	0	0.88915	1	120	120		35.201	11.678	1	186080	+		14691	21367	10133	10142	16950	16950					0.06358696485312976
HQLLFAAL	8	Unmodified	_HQLLFAAL_					0	0	0			REV__ENSG00000167207|ENST00000647318|NOD2	REV__ENSG00000167207|ENST00000647318|NOD2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	456.76872	911.522887	-0.35435	-0.00016185	-2.3484	-0.0010727	-2.7027	-0.0012345	456.76747065497955	16.53	0.35999	16.45	16.299	16.659	-0.080017	0.052054	0.0010049	NaN	35.201	24	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186080	+		14692	21367	10133	10142							0.06358696485312976
HQLLFAAL	8	Unmodified	_HQLLFAAL_					0	0	0			REV__ENSG00000167207|ENST00000647318|NOD2	REV__ENSG00000167207|ENST00000647318|NOD2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	456.76872	911.522887	0.70674	0.00032282	-3.0962	-0.0014142	-2.3894	-0.0010914	456.76699198798764	16.46	0.22921	16.377	16.291	16.52	-0.083363	-0.021308	0.00032176	NaN	35.201	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172740	+		14693	21367	10133	10142							0.06358696485312976
HQLLRLALGSN	11	Unmodified	_HQLLRLALGSN_					0	0	0			REV__nc|ENSG00000133858|O60293-2|ZFC3H1	REV__nc|ENSG00000133858|O60293-2|ZFC3H1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3555297851562	2	611.356754	1220.69895	-0.22744	-0.00013904	-0.12961	-7.924E-05	-0.35705	-0.00021828	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.72106	1	9559	9559		28.081	0.19925	1	8715400	+		14694	19099	10134	10143	16951	16951					0.09743285928584555
HQLLRLALGSN	11	Unmodified	_HQLLRLALGSN_					0	0	0			REV__nc|ENSG00000133858|O60293-2|ZFC3H1	REV__nc|ENSG00000133858|O60293-2|ZFC3H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3557739257812	2	611.356754	1220.69895	-0.40504	-0.00024762	-0.069959	-4.277E-05	-0.475	-0.00029039	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.7144	1	10065	10065		29.17	0	1	12417000	+		14695	19099	10134	10143	16952	16952					0.09743285928584555
HQLLRLALGSN	11	Unmodified	_HQLLRLALGSN_					0	0	0			REV__nc|ENSG00000133858|O60293-2|ZFC3H1	REV__nc|ENSG00000133858|O60293-2|ZFC3H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3554077148438	2	611.356754	1220.69895	1.8406	0.0011253	-2.148	-0.0013132	-0.3074	-0.00018793	611.3554755611618	95.715	4.0888	96.135	95.146	99.235	0.42051					346	99	4	0	0	0	0.59499	1	11410	11410		45.022	7.2107	1	11372000	+		14696	19099	10134	10143	16953	16953					0.09743285928584555
HQLLRLALGSN	11	Unmodified	_HQLLRLALGSN_					0	0	0			REV__nc|ENSG00000133858|O60293-2|ZFC3H1	REV__nc|ENSG00000133858|O60293-2|ZFC3H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.3552856445312	2	611.356754	1220.69895	0.93149	0.00056947	-1.1574	-0.00070761	-0.22595	-0.00013814	611.3560842580883	95.783	3.9941	96.187	95.298	99.293	0.40451					337	97	4	0	0	0	0.69248	2	11478	11478;11514		32.751	1.2207	1	11629000	+		14697	19099	10134	10143	16954;16955	16954					0.09743285928584555
HQLLSWFLH	9	Unmodified	_HQLLSWFLH_					0	0	0		ENST00000493040.5_1_7:150768589-150768772:+|nuORF	ENST00000493040.5_1_7:150768589-150768772:+|nuORF	ENST00000493040.5_1_7:150768589-150768772:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.2931518554688	2	590.816733	1179.61891	-1.2402	-0.00073271	-2.8334	-0.001674	-4.0735	-0.0024067	590.8150025805855	30.152	0.57036	30.137	29.939	30.509	-0.015167					20	13	2	0	0	0	0.20789	1	1591	1591		29.15	0	1	26528			14698	12715	10135	10144	16956	16956					0.03628844325407954
HQMAQAEASY	10	Oxidation (M)	_HQM(Oxidation (M))AQAEASY_		HQM(1)AQAEASY		HQM(51)AQAEASY	0	0	1			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	576.2428588867188	2	576.242938	1150.47132	-0.5751	-0.0003314	-2.6766	-0.0015424	-3.2517	-0.0018738	576.2412581993048	70.738	0.54914	70.701	70.457	71.006	-0.037857					45	27	2	0	0	0	0.5766	1	6875	6875		51.335	12.083	1	291680	+		14699	18287	10136	10145	16957	16957		266			-0.09789460061551836
HQNIASPTAQI	11	Unmodified	_HQNIASPTAQI_					0	0	0		ENSG00000131951|ENST00000570145|LRRC9	ENSG00000131951|ENST00000570145|LRRC9	ENSG00000131951|ENST00000570145|LRRC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.309326171875	2	590.309469	1178.60439	-1.7703	-0.001045	1.5027	0.00088708	-0.26753	-0.00015792	590.3101530818265	32.444	0.60775	32.438	32.214	32.822	-0.0061455					35	14	3	0	0	0	0.62614	1	1856	1856		41.427	2.1738	1	138260			14700	3756	10137	10146	16958	16958					0.022227273866064934
HQPPQQRR	8	Unmodified	_HQPPQQRR_					0	0	0			REV__ENSG00000181790|ENST00000517894|ADGRB1	REV__ENSG00000181790|ENST00000517894|ADGRB1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.783756	1045.55296	-1.534	-0.00080348	1.7183	0.0009	0.18426	9.6511E-05	523.7845592947747	88.093	0.97456	88.263	87.48	88.455	0.16923					29	19	2	0	0	0	0.4196	1	8596	8596		23.042	7.4007	1	129600	+		14701	22479	10138	10147	16959	16959					0.03200448203210726
HQPRRQRR	8	Unmodified	_HQPRRQRR_					0	0	0			REV__ENST00000296575.7_1_4:145567307-145567847:+|nuORF	REV__ENST00000296575.7_1_4:145567307-145567847:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.324462890625	2	567.329196	1132.64384	2.25	0.0012765	-0.68021	-0.0003859	1.5698	0.0008906	567.3286534850105	114.5	0.98564	114.51	114.35	115.34	0.0094528					75	47	2	0	0	0	0.87064	1	13847	13847		29.15	1.2673	1	119060	+		14702	24717	10139	10148	16960	16960					0.08282336971365112
HQPVSFYKLK	10	Unmodified	_HQPVSFYKLK_					0	0	0		nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA;ENSG00000174197|ENST00000703841|MGA	nc|ENSG00000174197|Q8IWI9-3|MGA	nc|ENSG00000174197|Q8IWI9-3|MGA	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.85107421875	2	623.850773	1245.68699	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.05	1	111.09	110.59	111.59	0.041832								0	0	0	0.45132	1	13439	13439		18.262	1.5447	1				14703	6914	10140	10149	16961	16961					0.0739766918541136
HQPVTRPIRL	10	Unmodified	_HQPVTRPIRL_					0	0	0		ENSG00000103089|ENST00000219368|FA2H	ENSG00000103089|ENST00000219368|FA2H	ENSG00000103089|ENST00000219368|FA2H	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24737548828125	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.23	1	118.21	117.71	118.71	-0.024208								0	0	0	0.45132	1	13094	13094		27.047	1.9795	1				14704	2054	10141	10150	16962	16962					0.12079296028105091
HQPYTFLNL	9	Unmodified	_HQPYTFLNL_					0	0	0			REV__ENSG00000099256|ENST00000320152|PRTFDC1	REV__ENSG00000099256|ENST00000320152|PRTFDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.7906494140625	2	566.792924	1131.57129	0.69296	0.00039277	-4.2741	-0.0024225	-3.5812	-0.0020298	566.790412921783	21.89	0.74046	21.265	20.955	21.695	-0.62558					43	18	3	0	0	0	0.76764	1	851	851		34.173	0.25091	1	497190	+		14705	17085	10142	10151	16963	16963					0.010771453345341797
HQQRLHRKKQL	11	Unmodified	_HQQRLHRKKQL_					0	0	0		nc|ENSG00000131023|O95835-2|LATS1;ENST00000542747.5_1_6:149997344-150023094:-|nuORF;ENST00000441107.5_1_6:149982867-150018260:-|nuORF;ENSG00000131023|ENST00000543571|LATS1	nc|ENSG00000131023|O95835-2|LATS1	nc|ENSG00000131023|O95835-2|LATS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.6335754394531	3	491.295409	1470.8644	2.8435	0.001397	4.484	0.002203	7.3275	0.0035999	491.29766695504253	111.68	0.68246	111.66	111.39	112.07	-0.025414					47	26	2	0	0	0	0.81021	1	12373	12373		9.2118	0.80454	1	55512			14706	3708	10143	10152	16964	16964					0.14779937508114926
HQQVALLA	8	Unmodified	_HQQVALLA_					0	0	0		nc|ENSG00000065029|P36508-2|ZNF76;ENSG00000065029|ENST00000373953|ZNF76;ENST00000229405.8_1_6:35262154-35262442:+|nuORF	nc|ENSG00000065029|P36508-2|ZNF76	nc|ENSG00000065029|P36508-2|ZNF76	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2548522949219	2	440.255977	878.497401	-1.4867	-0.00065454	0.10608	4.6703E-05	-1.3806	-0.00060783	440.2558792148897	67.228	0.84634	67.361	67.023	67.869	0.13326					70	34	3	0	0	0	0.87276	1	5992	5992		29.842	5.3375	1	457950			14707	1117	10144	10153	16965	16965					0.05329221962892916
HQRFNKLIWIH	11	Unmodified	_HQRFNKLIWIH_					0	0	0		nc|ENSG00000112146|Q9UK97-3|FBXO9;ENSG00000112146|ENST00000323557|FBXO9;nc|ENSG00000112146|Q9UK97|FBXO9;ENST00000474457.1_1_6:52958219-52962625:+|nuORF	nc|ENSG00000112146|Q9UK97-3|FBXO9	nc|ENSG00000112146|Q9UK97-3|FBXO9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.9503479003906	3	497.949239	1490.82589	1.0287	0.00051223	2.879	0.0014336	3.9076	0.0019458	497.95058281614104	17.211	0.41666	17.288	17.094	17.511	0.07715					38	17	3	0	0	0	0.78391	1	171	171		14.694	0.60766	1	63871			14708	2635	10145	10154	16966	16966					0.10010631873592502
HQSGSQGH	8	Unmodified	_HQSGSQGH_					0	0	0			REV__ENSG00000143520|ENST00000388718|FLG2	REV__ENSG00000143520|ENST00000388718|FLG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1834716796875	2	419.18354	836.352528	1.7002	0.00071268	-2.2445	-0.00094087	-0.54437	-0.00022819	419.18283597364456	92.161	2.0295	92.608	91.837	93.866	0.44661					131	47	5	0	0	0	0.88915	1	10998	10998		35.201	1.6851	1	2677100	+	+	14709	16019	10146	10155	16967	16967					-0.07219446184228673
HQSGSQGH	8	Unmodified	_HQSGSQGH_					0	0	0			REV__ENSG00000143520|ENST00000388718|FLG2	REV__ENSG00000143520|ENST00000388718|FLG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.183837890625	2	419.18354	836.352528	-1.2974	-0.00054386	1.5993	0.0006704	0.30187	0.00012654	419.18411210710514	90.282	1.6039	90.753	90.338	91.942	0.47068					66	39	2	0	0	0	0.87479	1	10728	10728		30.504	0	1	5668500	+	+	14710	16019	10146	10155	16968	16968					-0.07219446184228673
HQSGSQGH	8	Unmodified	_HQSGSQGH_					0	0	0			REV__ENSG00000143520|ENST00000388718|FLG2	REV__ENSG00000143520|ENST00000388718|FLG2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	419.18354	836.352528	-1.7814	-0.00074675	2.4438	0.0010244	0.6624	0.00027767	419.1844997864564	90.424	0.39974	90.642	90.426	90.826	0.21736	-0.058177	0.0015761	NaN	30.504	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70945	+	+	14711	16019	10146	10155							-0.07219446184228673
HQSGSQGH	8	Unmodified	_HQSGSQGH_					0	0	0			REV__ENSG00000143520|ENST00000388718|FLG2	REV__ENSG00000143520|ENST00000388718|FLG2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	419.18354	836.352528	0.64208	0.00026915	0.43231	0.00018122	1.0744	0.00045037	419.18363408342805	90.562	0.40334	90.716	90.513	90.916	0.15388	0.01551	-0.00011026	NaN	30.504	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54707	+	+	14712	16019	10146	10155							-0.07219446184228673
HQSGSQGH	8	Unmodified	_HQSGSQGH_					0	0	0			REV__ENSG00000143520|ENST00000388718|FLG2	REV__ENSG00000143520|ENST00000388718|FLG2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	419.18354	836.352528	1.5719	0.00065893	-2.3454	-0.00098317	-0.77349	-0.00032423	419.18286428539403	90.24	2.0224	90.69	89.818	91.841	0.45058	-0.0098734	-0.002439	NaN	30.504	88	51	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5475900	+	+	14713	16019	10146	10155							-0.07219446184228673
HQSGSQGH	8	Unmodified	_HQSGSQGH_					0	0	0			REV__ENSG00000143520|ENST00000388718|FLG2	REV__ENSG00000143520|ENST00000388718|FLG2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	419.18354	836.352528	-1.2974	-0.00054386	1.5993	0.0006704	0.30187	0.00012654	419.18411210710514	90.282	1.6039	90.753	90.338	91.942	0.47068	0.05254	0.00086812	NaN	30.504	66	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5668500	+	+	14714	16019	10146	10155							-0.07219446184228673
HQSPKKLKVNS	11	Unmodified	_HQSPKKLKVNS_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3695678710938	2	633.369861	1264.72517	-0.11908	-7.5423E-05	-0.90029	-0.00057022	-1.0194	-0.00064564	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.50531	1	9590	9590		51.528	17.355	1	2722900			14715	5146	10147	10156	16969	16969					0.10339555100085818
HQSPKKLKVNS	11	Unmodified	_HQSPKKLKVNS_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.37060546875	2	633.369861	1264.72517	0.88638	0.00056141	-2.1201	-0.0013428	-1.2337	-0.0007814	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.68532	1	9759	9759		33.922	1.1092	1	5166300			14716	5146	10147	10156	16970	16970					0.10339555100085818
HQSPKKLKVNS	11	Unmodified	_HQSPKKLKVNS_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3690795898438	2	633.369861	1264.72517	1.5936	0.0010093	-2.5684	-0.0016267	-0.97477	-0.00061739	633.3681450827713	95.612	2.2846	96.032	94.734	97.018	0.41963					200	55	4	0	0	0	0.62889	1	11504	11504		38.754	0	1	3838500			14717	5146	10147	10156	16971	16971					0.10339555100085818
HQSPPKRVSSL	11	Unmodified	_HQSPPKRVSSL_					0	0	0		ENSG00000120709|ENST00000239906|FAM53C	ENSG00000120709|ENST00000239906|FAM53C	ENSG00000120709|ENST00000239906|FAM53C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3467407226562	2	618.346386	1234.67822	-0.1645	-0.00010172	-0.48965	-0.00030278	-0.65415	-0.00040449	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.68532	1	9852	9852		33.922	1.1092	1	511870			14718	3148	10148	10157	16972	16972					0.0702669554896147
HQTTYTFRVK	10	Unmodified	_HQTTYTFRVK_					0	0	0		nc|ENSG00000169851|O60245|PCDH7;nc|ENSG00000169851|O60245-2|PCDH7;ENSG00000169851|ENST00000695919|PCDH7	nc|ENSG00000169851|O60245|PCDH7	nc|ENSG00000169851|O60245|PCDH7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3028259277344	3	427.56305	1279.66732	0.14832	6.3415E-05	-0.29675	-0.00012688	-0.14843	-6.3463E-05	427.5627936425367	66.801	1.0013	67.352	66.819	67.82	0.55071					71	30	3	0	0	0	0.37624	1	7251	7251		27.047	17.401	1	914100			14719	6528	10149	10158	16973	16973					0.03867293174653241
HQWLFRKRELR	11	Unmodified	_HQWLFRKRELR_					0	0	0			REV__ENSG00000185085|ENST00000330574|INTS5	REV__ENSG00000185085|ENST00000330574|INTS5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.6334838867188	3	523.635542	1567.8848	0.32578	0.00017059	-1.9357	-0.0010136	-1.6099	-0.00084301	523.9689871221619	45.265	0.71391	45.307	44.986	45.7	0.042599					45	17	3	0	0	0	0.81021	1	3239	3239		9.2118	2.8909	1	350910	+		14720	22735	10150	10159	16974	16974					0.12357108167930164
HRALKPGP	8	Unmodified	_HRALKPGP_					0	0	0			REV__ENST00000535095.5_1_12:95867705-95867888:+|nuORF	REV__ENST00000535095.5_1_12:95867705-95867888:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2620849609375	2	438.264136	874.51372	0.15263	6.689E-05	-1.9074	-0.00083592	-1.7547	-0.00076903	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.82464	1	2080	2080		21.702	0	1	11370000	+		14721	28377	10151	10160	16975	16975					0.07144347919643224
HRAPIGPK	8	Unmodified	_HRAPIGPK_					0	0	0			REV__ENST00000538370.5_1_9:37762010-37763860:+|nuORF	REV__ENST00000538370.5_1_9:37762010-37763860:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.264404296875	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.86288	1	3744	3744		26.796	6.3143	1	4268300	+		14722	27600	10152	10161	16976	16976					0.07144347919643224
HRARPSRRK	9	Unmodified	_HRARPSRRK_					0	0	0			REV__ENST00000586052.5_1_17:76475094-76487566:-|nuORF	REV__ENST00000586052.5_1_17:76475094-76487566:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353271484375	2	582.352671	1162.69079	3.1803	0.0018521	-1.9415	-0.0011306	1.2389	0.00072145	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.74721	1	11572	11572		37.159	0.84147	1	77008000	+		14723	29097	10153	10162	16977	16977					0.1159519652248946
HRATRRLL	8	Unmodified	_HRATRRLL_					0	0	0		ENST00000520019.1_1_5:179229676-179233279:-|nuORF	ENST00000520019.1_1_5:179229676-179233279:-|nuORF	ENST00000520019.1_1_5:179229676-179233279:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.820556640625	2	511.820141	1021.62573	0.52242	0.00026739	0.43294	0.00022159	0.95537	0.00048898	511.8202077464212	82.213	1.1329	82.686	82.162	83.295	0.47383					61	27	3	0	0	0	0.92457	1	9528	9528		47.916	9.1095	1	1651700			14724	13153	10154	10163	16978	16978					0.11578201996644566
HRCGIFVIN	9	Unmodified	_HRCGIFVIN_					0	0	0		ENST00000343986.8_1_20:60963518-60963563:+|nuORF	ENST00000343986.8_1_20:60963518-60963563:+|nuORF	ENST00000343986.8_1_20:60963518-60963563:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7811889648438	2	529.781836	1057.54912	0.4777	0.00025307	-2.2907	-0.0012136	-1.813	-0.00096051	529.7807050797124	49.497	1.236	49.957	49.582	50.818	0.45983					76	29	5	0	0	0	0.76255	1	4813	4813		35.618	2.1027	1	4861500			14725	10287	10155	10164	16979	16979					0.022646423851483632
HRCGIFVIN	9	Unmodified	_HRCGIFVIN_					0	0	0		ENST00000343986.8_1_20:60963518-60963563:+|nuORF	ENST00000343986.8_1_20:60963518-60963563:+|nuORF	ENST00000343986.8_1_20:60963518-60963563:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7813720703125	2	529.781836	1057.54912	0.065511	3.4706E-05	-1.597	-0.00084604	-1.5314	-0.00081133	529.7807903370734	52.522	1.485	53.136	52.584	54.069	0.61446					111	35	5	0	0	0	0.64922	1	5292	5292		44.117	7.67	1	6729200			14726	10287	10155	10164	16980	16980					0.022646423851483632
HRCVRTKKKI	10	Unmodified	_HRCVRTKKKI_					0	0	0			REV__ENSG00000186472|ENST00000333891|PCLO	REV__ENSG00000186472|ENST00000333891|PCLO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	423.59759521484375	3	423.595919	1267.76593	-0.18424	-7.8043E-05	4.3312	0.0018347	4.147	0.0017567	423.5976787176537	105.93	2.5264	105.91	105.23	107.75	-0.025146					222	59	5	0	0	0	0.86718	1	11470	11470		32.751	13.124	1	5735600	+		14727	22856	10156	10165	16981	16981					0.14275617938710639
HRCVRTKKKI	10	Unmodified	_HRCVRTKKKI_					0	0	0			REV__ENSG00000186472|ENST00000333891|PCLO	REV__ENSG00000186472|ENST00000333891|PCLO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	423.5975036621094	3	423.595919	1267.76593	2.7179	0.0011513	1.3319	0.00056417	4.0498	0.0017155	423.5963997730453	105.86	2.6165	105.82	105.15	107.76	-0.037148					224	61	5	0	0	0	0.85466	2	11644	11644;11703		32.751	20.318	1	6994400	+		14728	22856	10156	10165	16982;16983	16982					0.14275617938710639
HRCVRTKKKI	10	Unmodified	_HRCVRTKKKI_					0	0	0			REV__ENSG00000186472|ENST00000333891|PCLO	REV__ENSG00000186472|ENST00000333891|PCLO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.892822265625	2	634.890241	1267.76593	2.7956	0.0017749	0.63674	0.00040426	3.4324	0.0021792	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.64457	1	11685	11685		47.657	0	1	42597000	+		14729	22856	10156	10165	16984	16984					0.14275617938710639
HRCVRTKKKI	10	Unmodified	_HRCVRTKKKI_					0	0	0			REV__ENSG00000186472|ENST00000333891|PCLO	REV__ENSG00000186472|ENST00000333891|PCLO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5976867675781	3	423.595919	1267.76593	2.8995	0.0012282	1.1739	0.00049725	4.0733	0.0017255	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.8608	2	11528	11528;11563		46.457	19.409	1	6928400	+		14730	22856	10156	10165	16985;16986	16985					0.14275617938710639
HRCVRTKKKI	10	Unmodified	_HRCVRTKKKI_					0	0	0			REV__ENSG00000186472|ENST00000333891|PCLO	REV__ENSG00000186472|ENST00000333891|PCLO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.59759521484375	3	423.595919	1267.76593	0.73411	0.00031097	3.2795	0.0013892	4.0136	0.0017001	423.59723125055814	105.63	2.8345	105.73	105.02	107.86	0.10765					213	69	5	0	0	0	0.86763	1	11244	11244		38.754	16.192	1	8035700	+		14731	22856	10156	10165	16987	16987					0.14275617938710639
HREGLVVVKVF	11	Unmodified	_HREGLVVVKVF_					0	0	0		ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8824462890625	2	641.885147	1281.75574	-1.1529	-0.00074004	-3.1	-0.0019899	-4.2529	-0.0027299	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.70737	1	10059	10059		30.318	2.2362	1	3521600			14732	8058	10157	10166	16988	16988					0.1261333348509197
HRERRWKRLRQ	11	Unmodified	_HRERRWKRLRQ_					0	0	0			REV__ENST00000563197.5_2_16:30007482-30007590:+|nuORF	REV__ENST00000563197.5_2_16:30007482-30007590:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	541.3226928710938	3	540.985457	1619.93454	0.12146	6.5708E-05	0.50473	0.00027305	0.62619	0.00033876	541.320099175979	15.969	0.19611	16.028	15.931	16.127	0.059269					16	7	3	0	0	0	0.89215	1	98	98		3.2113	0	1	105790	+		14733	28813	10158	10167	16989	16989					0.14937235896582024
HRERSLQRTER	11	Unmodified	_HRERSLQRTER_					0	0	0		ENST00000562995.1_1_16:89389583-89390830:+|nuORF	ENST00000562995.1_1_16:89389583-89390830:+|nuORF	ENST00000562995.1_1_16:89389583-89390830:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.9369812011719	3	489.934428	1466.78146	0.17596	8.6207E-05	4.3992	0.0021553	4.5751	0.0022415	489.93655351151625	17.097	0.34768	16.615	16.457	16.804	-0.48256					14	7	3	0	0	0	0.76251	1	223	223		19.263	3.2559	1	213450			14734	13859	10159	10168	16990	16990					0.06673575989452729
HRFASLCWL	9	Unmodified	_HRFASLCWL_					0	0	0			REV__chr2:232566981-232567082|33|38.52|0.51|6.24|+|1|EIF4E2,None|1	REV__chr2:232566981-232567082|33|38.52|0.51|6.24|+|1|EIF4E2,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.7885131835938	2	566.789661	1131.56477	0.96166	0.00054506	1.3462	0.00076303	2.3079	0.0013081	566.7903425607038	21.672	0.75555	21.229	20.961	21.716	-0.44324					46	17	4	0	0	0	0.7932	1	787	787		24.203	0	1	466070	+		14735	15752	10160	10169	16991	16991					0.004249289022027369
HRGADPHILAK	11	Unmodified	_HRGADPHILAK_					0	0	0		chr19:19194133-19198107|28|17.18|0.95|4.18|+|0|RFXANK,RFXANK|1	chr19:19194133-19198107|28|17.18|0.95|4.18|+|0|RFXANK,RFXANK|1	chr19:19194133-19198107|28|17.18|0.95|4.18|+|0|RFXANK,RFXANK|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.56396484375	3	405.563273	1213.66799	-0.19603	-7.9504E-05	3.7734	0.0015303	3.5773	0.0014508	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.74763	1	5975	5975		15.337	0	1	328790			14736	269	10161	10170	16992	16992					0.06970132614378599
HRGKRKTK	8	Unmodified	_HRGKRKTK_					0	0	0			REV__nc|ENSG00000100852|Q13017-2|ARHGAP5	REV__nc|ENSG00000100852|Q13017-2|ARHGAP5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.2940368652344	2	505.820141	1009.62573	0.4184	0.00021164	1.6869	0.00085326	2.1053	0.0010649	505.8212757220051	17.801	0.18052	17.318	17.192	17.373	-0.48256					5	3	2	0	0	0	0.4196	1	309	309		21.96	3.6978	1	20043	+		14737	17224	10162	10171	16993	16993					0.12130201996649248
HRGKRKTK	8	Unmodified	_HRGKRKTK_					0	0	0			REV__nc|ENSG00000100852|Q13017-2|ARHGAP5	REV__nc|ENSG00000100852|Q13017-2|ARHGAP5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	505.820141	1009.62573	-0.55732	-0.0002819	9.1325	0.0046194	8.5752	0.0043375	506.32657908268015	16.996	0.088875	17.042	16.995	17.084	0.0457	-0.13813	0.0052945	NaN	27.882	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23614	+		14738	17224	10162	10171							0.12130201996649248
HRGLLKPKIFM	11	Unmodified	_HRGLLKPKIFM_					0	0	0		ENST00000451005.5_2_2:229983-234184:-|nuORF;ENST00000403712.6_1_2:229983-233125:-|nuORF;ENST00000481932.1_1_2:230955-234184:-|nuORF;ENST00000479739.6_1_2:230955-233125:-|nuORF	ENST00000451005.5_2_2:229983-234184:-|nuORF	ENST00000451005.5_2_2:229983-234184:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	447.27301025390625	3	447.272554	1338.79583	1.5068	0.00067396	-0.73412	-0.00032835	0.77271	0.00034561	447.2721343487067	107.14	1.0643	107.17	106.58	107.65	0.035622					102	24	6	0	0	0	0.74771	1	11749	11749		22.562	5.8442	1	9102100			14739	11255	10163	10172	16994	16994					0.13998556884030222
HRGMGLEQYG	10	Unmodified	_HRGMGLEQYG_					0	0	0			REV__nc|ENSG00000088387|Q9BZ29-6|DOCK9	REV__nc|ENSG00000088387|Q9BZ29-6|DOCK9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.2669067382812	2	574.26929	1146.52403	0.84086	0.00048288	-4.3784	-0.0025144	-3.5375	-0.0020315	574.2666801981707	96.876	5.0715	97.039	94.33	99.401	0.16316					175	119	3	0	0	0	0.80179	1	10115	10115		39.253	5.0803	1	185070	+		14740	16942	10164	10173	16995	16995					-0.043374572080892904
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.2367858886719	4	405.257511	1617.00094	-1.8599	-0.00075374	-2.2758	-0.00092229	-4.1357	-0.001676	405.2564354853266	63.445	0.51369	63.565	63.398	63.911	0.12004					43	25	4	0	0	0	0.85873	1	5548	5548		5.4129	2.2016	1	116790	+		14741	24647	10165	10174	16996	16996					0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5646057128906	4	405.257511	1617.00094	-1.8649	-0.00075578	-3.5352	-0.0014327	-5.4002	-0.0021885	405.2560757849323	60.457	0.65742	60.558	60.042	60.7	0.10082					38	25	2	0	0	0	0.1838	1	5208	5208		3.2113	1.7926	1	112890	+		14742	24647	10165	10174	16997	16997					0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5645446777344	4	405.257511	1617.00094	-1.8599	-0.00075374	-2.2758	-0.00092229	-4.1357	-0.001676	405.2564354853266	63.445	0.51369	63.565	63.398	63.911	0.12004					43	25	4	0	0	0	0.18238	1	5561	5561		9.2118	7.8899	1	116790	+		14743	24647	10165	10174	16998	16998					0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.5649719238281	4	405.257511	1617.00094	-0.96396	-0.00039065	-3.8211	-0.0015485	-4.785	-0.0019392	405.25597223398614	60.896	0.39463	60.904	60.646	61.041	0.0081177					24	14	2	0	0	0	0.18386	1	5309	5309		5.6988	4.3769	1	109680	+		14744	24647	10165	10174	16999	16999					0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.89892578125	4	405.257511	1617.00094	-0.94905	-0.00038461	-3.8814	-0.001573	-4.8305	-0.0019576	405.5065970787181	60.342	0.58213	60.345	60.058	60.641	0.002388					28	18	2	0	0	0	0.18238	1	5210	5210		9.2118	8.8713	1	169070	+		14745	24647	10165	10174	17000	17000					0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.2816772460938	3	540.00759	1617.00094	-1.3938	-0.00075268	-2.528	-0.0013652	-3.9219	-0.0021178	540.3412321373579	58.843	0.21075	59.235	59.148	59.359	0.39209					7	4	2	0	0	0	0.18408	1	6189	6189		1.4188	1.0473	1	81015	+		14746	24647	10165	10174	17001	17001					0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.7824096679688	3	540.00759	1617.00094	-0.2274	-0.0001228	-4.4523	-0.0024043	-4.6797	-0.0025271	540.0049321587076	58.188	0.36726	58.741	58.512	58.88	0.55323					10	8	2	0	0	0	0.18404	1	6088	6088		1.523	1.523	1	142520	+		14747	24647	10165	10174	17002	17002					0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	540.00759	1617.00094	-0.43909	-0.00023711	-7.2771	-0.0039297	-7.7162	-0.0041668	540.3371289493275	58.851	0.16846	58.885	58.818	58.986	0.033909	-0.036038	-0.0031215	NaN	1.523	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38934	+		14748	24647	10165	10174							0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	540.00759	1617.00094	0.01557	8.4079E-06	-5.5874	-0.0030172	-5.5718	-0.0030088	540.0046166038006	58.764	0.241	58.851	58.721	58.962	0.087002	-0.070179	-0.0003841	NaN	1.523	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47922	+		14749	24647	10165	10174							0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	540.00759	1617.00094	-0.45177	-0.00024396	-6.5839	-0.0035553	-7.0357	-0.0037993	540.3377015253403	58.9	0.33939	58.892	58.798	59.137	-0.0074387	-0.028484	-0.0019985	NaN	1.523	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100280	+		14750	24647	10165	10174							0.21711909301825472
HRHAGAQPHGH	11	Unmodified	_HRHAGAQPHGH_					0	0	0		ENST00000270824.1_1_1:36787668-36787989:-|nuORF	ENST00000270824.1_1_1:36787668-36787989:-|nuORF	ENST00000270824.1_1_1:36787668-36787989:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.7943115234375	2	602.795186	1203.57582	0.12196	7.3519E-05	-0.76549	-0.00046143	-0.64353	-0.00038792	602.7947231540592	21.846	0.45973	21.787	21.537	21.996	-0.058668					17	13	2	0	0	0	0.7342	1	672	672		25.574	1.3713	1	18412			14751	9558	10166	10175	17003	17003					-0.017825326792944907
HRHHVTRTHA	10	Unmodified	_HRHHVTRTHA_					0	0	0		ENST00000430820.1_1_X:134654205-134654552:-|nuORF	ENST00000430820.1_1_X:134654205-134654552:-|nuORF	ENST00000430820.1_1_X:134654205-134654552:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.8341674804688	2	626.331936	1250.64932	0.1526	9.5579E-05	1.4307	0.00089609	1.5833	0.00099167	626.3326782105968	42.989	0.76316	42.96	42.637	43.4	-0.029461					40	17	3	0	0	0	0.47072	1	3231	3231		54.776	18.33	1	443750			14752	11639	10167	10176	17004	17004					0.03402015763185773
HRIGVFVRRAI	11	Unmodified	_HRIGVFVRRAI_					0	0	0		ENST00000431167.1_1_21:36972032-36972302:-|nuORF	ENST00000431167.1_1_21:36972032-36972302:-|nuORF	ENST00000431167.1_1_21:36972032-36972302:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.93939208984375	3	441.942195	1322.80476	-1.6543	-0.0007311	-3.5636	-0.0015749	-5.2179	-0.002306	441.9404880038731	55.736	1.19	55.736	54.998	56.188	0					100	33	4	0	0	0	0.76251	1	4701	4701		19.263	0.73163	1	347630			14753	11643	10168	10177	17005	17005					0.15626666564753577
HRILANKRR	9	Unmodified	_HRILANKRR_					0	0	0			REV__ENSG00000140534|ENST00000268138|TICRR	REV__ENSG00000140534|ENST00000268138|TICRR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3533325195312	2	582.365247	1162.71594	3.1754	0.0018493	3.8517	0.0022431	7.0272	0.0040924	582.3673257085017	104.21	0.13046	104.16	104.05	104.18	-0.043755					4	2	2	0	0	0	0.20789	1	11438	11438		35.618	12.576	1	63837	+		14754	19628	10169	10178	17006	17006					0.14109251325066907
HRIYPITF	8	Unmodified	_HRIYPITF_					0	0	0		ENSG00000172986|ENST00000389617|GXYLT2	ENSG00000172986|ENST00000389617|GXYLT2	ENSG00000172986|ENST00000389617|GXYLT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7928466796875	2	523.792727	1045.5709	1.1929	0.00062481	1.036	0.00054262	2.2288	0.0011674	523.7931742755334	19.706	1.4854	19.236	18.928	20.414	-0.46967					77	32	3	0	0	0	0.884	1	536	536		33.516	8.0654	1	1002100			14755	6813	10170	10179	17007	17007					0.04993770405349096
HRKFRSGLIVP	11	Unmodified	_HRKFRSGLIVP_					0	0	0		nc|ENSG00000107789|Q9UNW1-4|MINPP1;ENSG00000107789|ENST00000371996|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.267822265625	3	437.266568	1308.77787	-0.7643	-0.0003342	3.6976	0.0016168	2.9333	0.0012826	437.2680989446087	50.458	1.6052	50.435	49.633	51.238	-0.02343					188	43	5	0	0	0	0.69071	2	4351	4351;4434		33.039	8.8076	1	2919200			14756	2369	10171	10180	17008;17009	17008					0.13583557953552372
HRKFRSGLIVP	11	Unmodified	_HRKFRSGLIVP_					0	0	0		nc|ENSG00000107789|Q9UNW1-4|MINPP1;ENSG00000107789|ENST00000371996|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26763916015625	3	437.266568	1308.77787	-0.68964	-0.00030156	3.497	0.0015291	2.8073	0.0012275	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.78391	1	4855	4855		14.694	0.60766	1	2651700			14757	2369	10171	10180	17010	17010					0.13583557953552372
HRKFRSGLIVP	11	Unmodified	_HRKFRSGLIVP_					0	0	0		nc|ENSG00000107789|Q9UNW1-4|MINPP1;ENSG00000107789|ENST00000371996|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2678527832031	3	437.266568	1308.77787	0.28665	0.00012534	2.7276	0.0011927	3.0143	0.001318	437.2676689275105	50.631	1.3868	50.681	50.015	51.402	0.049896					192	41	5	0	0	0	0.69071	2	4083	3962;4083		33.039	1.4051	1	2963500			14758	2369	10171	10180	17011;17012	17012					0.13583557953552372
HRKFRSGLIVP	11	Unmodified	_HRKFRSGLIVP_					0	0	0		nc|ENSG00000107789|Q9UNW1-4|MINPP1;ENSG00000107789|ENST00000371996|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2674560546875	3	437.266568	1308.77787	0.29718	0.00012995	2.7258	0.0011919	3.023	0.0013219	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.76579	2	4280	4104;4280		18.531	2.2608	1	4533800			14759	2369	10171	10180	17013;17014	17014					0.13583557953552372
HRKFRSGLIVP	11	Unmodified	_HRKFRSGLIVP_					0	0	0		nc|ENSG00000107789|Q9UNW1-4|MINPP1;ENSG00000107789|ENST00000371996|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.267822265625	3	437.266568	1308.77787	-0.53562	-0.00023421	3.585	0.0015676	3.0494	0.0013334	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.74771	2	4196	4196;4235		22.562	4.0305	1	4132000			14760	2369	10171	10180	17015;17016	17015					0.13583557953552372
HRKFRSGLIVP	11	Unmodified	_HRKFRSGLIVP_					0	0	0		nc|ENSG00000107789|Q9UNW1-4|MINPP1;ENSG00000107789|ENST00000371996|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	nc|ENSG00000107789|Q9UNW1-4|MINPP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26751708984375	3	437.266568	1308.77787	0.02954	1.2917E-05	2.8309	0.0012379	2.8604	0.0012508	437.26770833059527	48.1	1.3181	49.023	48.466	49.784	0.92315					115	32	4	0	0	0	0.74771	1	4621	4621		22.562	3.2989	1	3276900			14761	2369	10171	10180	17017	17017					0.13583557953552372
HRKLDTKLKYK	11	Unmodified	_HRKLDTKLKYK_					0	0	0			REV__ENSG00000066279|ENST00000367409|ASPM	REV__ENSG00000066279|ENST00000367409|ASPM	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.62432861328125	3	477.292782	1428.85652	2.8125	0.0013424	-4.4304	-0.0021146	-1.6179	-0.00077222	477.2906374225327	117.82	0.24985	117.79	117.65	117.9	-0.02433					12	8	2	0	0	0	0.18131	1	13036	13036		17.833	5.9008	1	68478	+		14762	16520	10172	10181	17018	17018					0.15924365467958523
HRKLITIL	8	Unmodified	_HRKLITIL_					0	0	0			REV__ENSG00000197786|ENST00000357377|OR5B17	REV__ENSG00000197786|ENST00000357377|OR5B17	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.3299865722656	2	497.332019	992.649485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.81	1	21.753	21.253	22.253	-0.057203								0	0	0	0.31173	1	631	631		8.8223	0.59103	1		+		14763	23270	10173	10182	17019	17019					0.15286622710459596
HRLFLITNRLT	11	Unmodified	_HRLFLITNRLT_					0	0	0			REV__ENSG00000176853|ENST00000334705|FAM91A1	REV__ENSG00000176853|ENST00000334705|FAM91A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.9476318359375	3	461.945494	1382.81465	2.7792	0.0012839	3.2357	0.0014947	6.015	0.0027786	461.94697066502204	112.87	7.7849	112.84	112.19	119.97	-0.024811					433	277	2	0	0	0	0.77511	1	12512	12512		16.53	1.8362	1	2186600	+		14764	22148	10174	10183	17020	17020					0.13855809779465744
HRLFNEHLVS	10	Unmodified	_HRLFNEHLVS_					0	0	0		ENSG00000198198|ENST00000634258|SZT2;nc|ENSG00000198198|Q5T011-5|SZT2;nc|ENSG00000198198|Q5T011-4|SZT2	ENSG00000198198|ENST00000634258|SZT2	ENSG00000198198|ENST00000634258|SZT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3321533203125	2	626.333279	1250.652	-0.96726	-0.00060583	0.24106	0.00015098	-0.7262	-0.00045484	626.3333261036785	43.059	0.81004	43.023	42.595	43.405	-0.035816					50	18	4	0	0	0	0.5442	1	3335	3335		40.778	16.259	1	287350			14765	8253	10175	10184	17021	17021					0.03670426377448166
HRLGRSVALL	10	Unmodified	_HRLGRSVALL_					0	0	0			REV__ENST00000409509.5_3_16:67243955-67260901:-|nuORF	REV__ENST00000409509.5_3_16:67243955-67260901:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.3504028320312	2	561.348732	1120.68291	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.317	1	76.441	75.941	76.941	0.12485								0	0	0	0.45132	1	7135	7135		25.574	0.12388	1		+		14766	26072	10176	10185	17022	17022					0.12739624482355794
HRLIAKMKL	9	Unmodified	_HRLIAKMKL_					0	0	0			REV__ENST00000466133.1_1_3:159820071-159820575:+|nuORF	REV__ENST00000466133.1_1_3:159820071-159820575:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3533325195312	2	555.352428	1108.6903	0.85674	0.00047579	0.63766	0.00035412	1.4944	0.00082991	555.3526695275054	100.86	2.5278	101	100.46	102.99	0.14352					194	61	5	0	0	0	0.7932	1	10597	10597		17.365	0.89182	1	5097700	+		14767	27122	10177	10186	17023	17023					0.14030640758414847
HRLLAAALKSH	11	Unmodified	_HRLLAAALKSH_					0	0	0		ENST00000452475.5_1_7:72986280-72992879:-|nuORF;ENSG00000106638|ENST00000305632|TBL2	ENST00000452475.5_1_7:72986280-72992879:-|nuORF	ENST00000452475.5_1_7:72986280-72992879:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2489929199219	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.4	1	114.43	113.93	114.93	0.026466								0	0	0	0.56276	1	12524	12524		22.562	1.7244	1				14768	2310	10178	10187	17024	17024					0.12079296028105091
HRLLLHLLLNL	11	Unmodified	_HRLLLHLLLNL_					0	0	0		ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-5|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6	ENSG00000186976|ENST00000262726|EFCAB6	ENSG00000186976|ENST00000262726|EFCAB6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.2894592285156	3	452.294235	1353.86087	-1.8031	-0.00081552	-3.8336	-0.0017339	-5.6367	-0.0025494	452.2932169096563	45.367	0.21002	45.367	45.292	45.502	0					5	4	2	0	0	0	0.72892	1	3362	3362		26.75	5.7175	1	25521			14769	7832	10179	10188	17025	17025					0.19809874681573092
HRLLLHLLLNL	11	Unmodified	_HRLLLHLLLNL_					0	0	0		ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-5|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6	ENSG00000186976|ENST00000262726|EFCAB6	ENSG00000186976|ENST00000262726|EFCAB6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	452.294235	1353.86087	-1.0792	-0.0004881	-9.7907	-0.0044283	-10.87	-0.0049164	452.2891761646426	44.512	0.47862	45.356	45.106	45.585	0.84437	-0.0057431	-0.0077974	NaN	26.75	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	131440			14770	7832	10179	10188							0.19809874681573092
HRLMQLEY	8	Unmodified	_HRLMQLEY_					0	0	0			REV__ENST00000494092.1_1_1:44685134-44686104:+|nuORF	REV__ENST00000494092.1_1_1:44685134-44686104:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.2841186523438	2	545.279126	1088.5437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.022	1	60.009	59.509	60.509	-0.013729								0	0	0	0.29816	1	5533	5533		38.806	3.6541	1		+		14771	22247	10180	10189	17026	17026					0.0029691880267819215
HRLVNISVGR	10	Unmodified	_HRLVNISVGR_					0	0	0			REV__nc|ENSG00000136636|Q9Y597-2|KCTD3	REV__nc|ENSG00000136636|Q9Y597-2|KCTD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8428344726562	2	575.843813	1149.67307	-0.49921	-0.00028747	-0.94267	-0.00054283	-1.4419	-0.0008303	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.86348	1	8722	8722		31.53	3.6476	1	1518700	+		14772	19323	10181	10190	17027	17027					0.10422436476960684
HRMERNIPGA	10	Unmodified	_HRMERNIPGA_					0	0	0			REV__nc|ENSG00000103549|O75150-3|RNF40	REV__nc|ENSG00000103549|O75150-3|RNF40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8038940429688	2	590.803831	1179.59311	-2.3707	-0.0014006	1.9547	0.0011548	-0.41604	-0.0002458	590.8048142478464	63.97	0.98344	63.997	63.65	64.634	0.027138					67	27	4	0	0	0	0.54701	1	6050	6050		52.937	3.4007	1	805220	+		14773	17422	10182	10191	17028	17028					0.010496268115048224
HRMRLKSAPLR	11	Unmodified	_HRMRLKSAPLR_					0	0	0			REV__ENST00000534488.5_1_11:66204578-66204701:-|nuORF	REV__ENST00000534488.5_1_11:66204578-66204701:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.9427490234375	3	455.606707	1363.79829	0.47438	0.00021613	2.957	0.0013472	3.4314	0.0015634	455.6080397143124	69.123	0.72706	69.251	68.88	69.607	0.12838					69	31	3	0	0	0	0.74405	1	6261	6261		23.378	0.79825	1	233840	+		14774	28368	10183	10192	17029	17029					0.13094405341712445
HRMRLKSAPLR	11	Unmodified	_HRMRLKSAPLR_					0	0	0			REV__ENST00000534488.5_1_11:66204578-66204701:-|nuORF	REV__ENST00000534488.5_1_11:66204578-66204701:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.9416198730469	3	455.606707	1363.79829	-0.55129	-0.00025117	4.362	0.0019873	3.8107	0.0017362	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.62914	2	7112	7112;7272		41.08	5.9018	1	1732400	+		14775	28368	10183	10192	17030;17031	17030					0.13094405341712445
HRNQRKRR	8	Unmodified	_HRNQRKRR_					0	0	0		ENST00000472730.1_1_3:61728131-61728755:-|nuORF	ENST00000472730.1_1_3:61728131-61728755:-|nuORF	ENST00000472730.1_1_3:61728131-61728755:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8432006835938	2	575.842471	1149.67039	-1.368	-0.00078773	2.1063	0.0012129	0.73831	0.00042515	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.89962	1	9443	9443		38.806	1.647	1	6121300			14776	12268	10184	10193	17032	17032					0.10154025862675553
HRNSQLYGA	9	Unmodified	_HRNSQLYGA_					0	0	0		nc|ENSG00000140265|Q8IWY8-2|ZSCAN29;ENSG00000140265|ENST00000684362|ZSCAN29;ENST00000566849.5_1_15:43653273-43656590:-|nuORF;nc|ENSG00000140265|Q8IWY8-3|ZSCAN29;ENST00000570181.2_1_15:43656083-43656590:-|nuORF	nc|ENSG00000140265|Q8IWY8-2|ZSCAN29	nc|ENSG00000140265|Q8IWY8-2|ZSCAN29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.7606201171875	2	523.262322	1044.51009	-0.58611	-0.00030669	-3.5403	-0.0018525	-4.1264	-0.0021592	523.7610662863972	60.377	0.92597	60.408	60.027	60.953	0.0312					81	26	4	0	0	0	0.58668	1	5609	5609		47.657	1.7054	1	376950			14777	4419	10185	10194	17033	17033					-0.010383666448660733
HRNWKIRRRIK	11	Unmodified	_HRNWKIRRRIK_					0	0	0		chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	521.6566772460938	3	521.658681	1561.95422	-1.2934	-0.0006747	-1.8382	-0.00095891	-3.1316	-0.0016336	521.6576101839959	55.646	1.2053	55.646	55.208	56.414	0					123	38	5	0	0	0	0.84494	2	4757	4711;4757		6.3209	1.1785	1	828200			14778	188	10186	10195	17034;17035	17035					0.1957161190732677
HRNWKIRRRIK	11	Unmodified	_HRNWKIRRRIK_					0	0	0		chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	521.6565551757812	3	521.658681	1561.95422	0.0018454	9.6266E-07	-2.8837	-0.0015043	-2.8818	-0.0015033	521.6570438345822	55.201	1.4309	55.194	54.756	56.187	-0.0077057					142	39	5	0	0	0	0.84494	1	4973	4973		6.3209	0.6221	1	1446100			14779	188	10186	10195	17036	17036					0.1957161190732677
HRNWKIRRRIK	11	Unmodified	_HRNWKIRRRIK_					0	0	0		chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	522.3255615234375	3	521.658681	1561.95422	0.011985	6.2519E-06	-3.3346	-0.0017395	-3.3226	-0.0017333	521.6568251732957	55.332	1.3019	55.36	54.888	56.19	0.027672					121	33	5	0	0	0	0.8498	1	5066	5066		6.001	2.7897	1	1506400			14780	188	10186	10195	17037	17037					0.1957161190732677
HRNWKIRRRIK	11	Unmodified	_HRNWKIRRRIK_					0	0	0		chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	521.6572875976562	3	521.658681	1561.95422	-0.25952	-0.00013538	-2.6898	-0.0014032	-2.9493	-0.0015385	521.6571947989914	55.231	1.5244	55.294	54.783	56.307	0.063725					161	52	4	0	0	0	0.88916	1	4575	4575		3.4087	0.19739	1	1935400			14781	188	10186	10195	17038	17038					0.1957161190732677
HRNWKIRRRIK	11	Unmodified	_HRNWKIRRRIK_					0	0	0		chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	521.65625	3	521.658681	1561.95422	0.41338	0.00021564	-3.4663	-0.0018082	-3.0529	-0.0015926	521.9911888530377	55.139	1.4097	55.23	54.807	56.216	0.091167					167	45	5	0	0	0	0.8498	1	4643	4643		6.001	0.58812	1	1954200			14782	188	10186	10195	17039	17039					0.1957161190732677
HRPAVAPK	8	Unmodified	_HRPAVAPK_					0	0	0			REV__nc|ENSG00000204469|P48634-2|PRRC2A	REV__nc|ENSG00000204469|P48634-2|PRRC2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2623596191406	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.81548	1	2792	2792		20.482	4.8456	1	3673500	+		14783	23495	10187	10196	17040	17040					0.07144347919643224
HRPHHSDWG	9	Unmodified	_HRPHHSDWG_					0	0	0		ENST00000360319.8_1_X:153583382-153585815:-|nuORF	ENST00000360319.8_1_X:153583382-153585815:-|nuORF	ENST00000360319.8_1_X:153583382-153585815:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.761962890625	2	564.757738	1127.50092	1.8171	0.0010262	3.8674	0.0021841	5.6845	0.0032103	564.7595622779485	23.779	0.71997	23.205	22.878	23.598	-0.57415					31	16	3	0	0	0	0.76255	1	1109	1109		35.618	1.4457	1	195780			14784	10445	10188	10197	17041	17041					-0.057727152105371715
HRPLHIITF	9	Unmodified	_HRPLHIITF_					0	0	0			REV__ENSG00000131019|ENST00000367339|ULBP3	REV__ENSG00000131019|ENST00000367339|ULBP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.330322265625	2	567.33255	1132.65055	-1.2007	-0.00068122	-3.1311	-0.0017764	-4.3318	-0.0024576	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.7932	1	9419	9419		18.324	0.95945	1	5763000	+		14785	18929	10189	10198	17042	17042					0.08952837079368692
HRRAGPVSIP	10	Unmodified	_HRRAGPVSIP_					0	0	0			REV__ENSG00000185950|ENST00000375856|IRS2	REV__ENSG00000185950|ENST00000375856|IRS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.317138671875	2	545.317432	1088.62031	0.73643	0.00040159	-2.1406	-0.0011673	-1.4042	-0.00076572	545.316117867523	88.493	3.0395	88.643	86.614	89.654	0.15055					258	71	4	0	0	0	0.8651	1	8692	8692		25.574	0.12388	1	5181100	+		14786	22811	10190	10199	17043	17043					0.07954478414194455
HRRIKRGKTQ	10	Unmodified	_HRRIKRGKTQ_					0	0	0			REV__nc|ENSG00000188994|O60281-2|ZNF292	REV__nc|ENSG00000188994|O60281-2|ZNF292	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3936767578125	2	640.394536	1278.77452	-0.0023581	-1.5101E-06	-2.2724	-0.0014552	-2.2748	-0.0014568	640.3930794229678	53.7	0.84142	53.695	53.277	54.118	-0.0053711					48	20	3	0	0	0	0.85251	1	4695	4695		19.997	0.89325	1	158160	+		14787	23052	10191	10200	17044	17044					0.14628307899556603
HRRKKLRTLNI	11	Unmodified	_HRRKKLRTLNI_					0	0	0		ENST00000378535.4_1_12:88890181-88890376:-|nuORF	ENST00000378535.4_1_12:88890181-88890376:-|nuORF	ENST00000378535.4_1_12:88890181-88890376:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.30902099609375	3	478.975788	1433.90553	0.30578	0.00014646	-2.6417	-0.0012653	-2.3359	-0.0011188	478.97445511920006	47.863	1.3107	47.901	47.243	48.554	0.037731					72	41	3	0	0	0	0.77205	1	3671	3671		17.167	4.7339	1	244030			14788	10867	10192	10201	17045	17045					0.20593698547622807
HRRMRDIQ	8	Unmodified	_HRRMRDIQ_					0	0	0			REV__ENSG00000143850|ENST00000272203|PLEKHA6	REV__ENSG00000143850|ENST00000272203|PLEKHA6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.2928466796875	2	556.298716	1110.58288	0.020707	1.1519E-05	-0.4897	-0.00027242	-0.46899	-0.0002609	556.2982403934259	75.405	0.62208	75.8	75.574	76.196	0.39507					30	14	3	0	0	0	0.91472	1	8526	8526		44.117	1.7207	1	508580	+		14789	19848	10193	10202	17046	17046					0.03201063876917942
HRRPSPRRLPR	11	Unmodified	_HRRPSPRRLPR_					0	0	0		ENSG00000230778|ENST00000434396|ANKRD63	ENSG00000230778|ENST00000434396|ANKRD63	ENSG00000230778|ENST00000434396|ANKRD63	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.9573669433594	3	476.623748	1426.84942	2.8112	0.0013399	-2.9242	-0.0013937	-0.11299	-5.3855E-05	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.76579	1	12815	12815		18.531	2.5243	1	2689700			14790	8732	10194	10203	17047	17047					0.1530649043077119
HRRQFITQLS	10	Unmodified	_HRRQFITQLS_					0	0	0		ENST00000482846.1_1_15:63448921-63449038:-|nuORF	ENST00000482846.1_1_15:63448921-63449038:-|nuORF	ENST00000482846.1_1_15:63448921-63449038:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3697509765625	2	643.359828	1284.7051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.3	1	114.28	113.78	114.78	-0.024452								0	0	0	0.45132	1	12662	12662		35.152	5.982	1				14791	12494	10195	10204	17048	17048					0.0741380416013726
HRRQFITQLS	10	Unmodified	_HRRQFITQLS_					0	0	0		ENST00000482846.1_1_15:63448921-63449038:-|nuORF	ENST00000482846.1_1_15:63448921-63449038:-|nuORF	ENST00000482846.1_1_15:63448921-63449038:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.3677978515625	2	643.359828	1284.7051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.51	1	116.5	116	117	-0.014999								0	0	0	0.45132	1	13976	13976		24.519	0.99649	1				14792	12494	10195	10204	17049	17049					0.0741380416013726
HRRRMGKLLRR	11	Unmodified	_HRRRMGKLLRR_					0	0	0		nc|ENSG00000180347|Q6ZRS4-3|ITPRID1;ENSG00000180347|ENST00000615280|ITPRID1;nc|ENSG00000180347|Q6ZRS4-4|ITPRID1	nc|ENSG00000180347|Q6ZRS4-3|ITPRID1	nc|ENSG00000180347|Q6ZRS4-3|ITPRID1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3017272949219	3	493.640633	1477.90007	-0.93941	-0.00046373	-2.2945	-0.0011327	-3.2339	-0.0015964	493.97372367616185	15.801	0.17871	15.718	15.628	15.806	-0.083363					10	7	2	0	0	0	0.18131	1	73	73		12.957	6.9564	1	77624			14793	7327	10196	10205	17050	17050					0.1802369648412423
HRTGGLGK	8	Unmodified	_HRTGGLGK_					0	0	0			REV__ENST00000305850.9_1_16:81040200-81040455:+|nuORF	REV__ENST00000305850.9_1_16:81040200-81040455:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2372131347656	2	413.238119	824.461684	-0.12335	-5.0972E-05	0.56146	0.00023202	0.43812	0.00018105	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.8347	1	7395	7395		23.042	0	1	1978800	+		14794	24819	10197	10206	17051	17051					0.04243184505912723
HRTKEALKPFG	11	Unmodified	_HRTKEALKPFG_					0	0	0			REV__ENSG00000189045|ENST00000601380|ANKDD1B	REV__ENSG00000189045|ENST00000601380|ANKDD1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.36376953125	2	642.364579	1282.7146	2.0845	0.001339	-4.2883	-0.0027547	-2.2038	-0.0014157	642.361819653108	110.23	1.6844	110.29	109.66	111.35	0.054062					109	58	2	0	0	0	0.45992	1	13344	13344		54.722	10.606	1	2848100	+		14795	23058	10198	10207	17052	17052					0.08455572445632242
HRVLPTFIISI	11	Unmodified	_HRVLPTFIISI_					0	0	0		ENSG00000100739|ENST00000216629|BDKRB1	ENSG00000100739|ENST00000216629|BDKRB1	ENSG00000100739|ENST00000216629|BDKRB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3934936523438	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.76322	1	12562	12562		19.104	1.6355	1	2297700			14796	1865	10199	10208	17053	17053					0.14054504144928615
HRVPDRQLL	9	Unmodified	_HRVPDRQLL_					0	0	0			REV__chr19:1399195-1401296|47|21.94|0.39|5.82|-|1|GAMT,GAMT|1	REV__chr19:1399195-1401296|47|21.94|0.39|5.82|-|1|GAMT,GAMT|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3312377929688	2	567.330539	1132.64652	1.203	0.00068247	-1.0748	-0.00060977	0.12815	7.2702E-05	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.7932	1	10640	10640		3.6843	0.52512	1	4990000	+		14797	15681	10200	10209	17054	17054					0.0855074758567298
HRVRIPPDSA	10	Unmodified	_HRVRIPPDSA_					0	0	0		ENST00000507952.1_1_10:75490350-75491018:+|nuORF	ENST00000507952.1_1_10:75490350-75491018:+|nuORF	ENST00000507952.1_1_10:75490350-75491018:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3197631835938	2	574.320171	1146.62579	-1.0331	-0.00059332	-0.2741	-0.00015742	-1.3072	-0.00075074	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.86218	1	9861	9861		32.812	0	1	1380900			14798	12968	10201	10210	17055	17055					0.0583415720600442
HRWLWHQHLSL	11	Unmodified	_HRWLWHQHLSL_					0	0	0			REV__ENST00000420798.6_2_X:54955907-54955955:+|nuORF	REV__ENST00000420798.6_2_X:54955907-54955955:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	504.9392395019531	3	504.937221	1511.78984	-0.50503	-0.00025501	2.1099	0.0010653	1.6048	0.00081034	504.93822048751315	56.717	0.75676	56.789	56.58	57.336	0.071835					73	35	3	0	0	0	0.76087	1	4774	4774		19.627	3.0971	1	653270	+		14799	26492	10202	10211	17056	17056					0.05441174696761664
HRWLWHQHLSL	11	Unmodified	_HRWLWHQHLSL_					0	0	0			REV__ENST00000420798.6_2_X:54955907-54955955:+|nuORF	REV__ENST00000420798.6_2_X:54955907-54955955:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	505.271728515625	3	504.937221	1511.78984	0.40948	0.00020676	1.0047	0.00050733	1.4142	0.00071409	504.9376797960629	56.544	0.77992	56.643	56.487	57.266	0.099186					51	34	2	0	0	0	0.74771	1	4783	4783		22.562	0.78116	1	733080	+		14800	26492	10202	10211	17057	17057					0.05441174696761664
HRWLWHQHLSL	11	Unmodified	_HRWLWHQHLSL_					0	0	0			REV__ENST00000420798.6_2_X:54955907-54955955:+|nuORF	REV__ENST00000420798.6_2_X:54955907-54955955:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	504.9393005371094	3	504.937221	1511.78984	-0.48501	-0.0002449	2.0822	0.0010514	1.5971	0.00080646	504.9382559423754	56.501	0.77333	56.475	56.384	57.158	-0.026108					61	37	2	0	0	0	0.77205	1	4772	4772		17.167	3.6588	1	644060	+		14801	26492	10202	10211	17058	17058					0.05441174696761664
HRWNHYTIRRY	11	Unmodified	_HRWNHYTIRRY_					0	0	0			REV__nc|ENSG00000133256|P35913-3|PDE6B	REV__nc|ENSG00000133256|P35913-3|PDE6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	534.9437255859375	3	534.611397	1600.81236	-0.12029	-6.4306E-05	-3.3471	-0.0017894	-3.4674	-0.0018537	534.6095537250175	26.76	0.76882	26.827	26.556	27.325	0.066877					91	35	4	0	0	0	0.8498	1	1046	1046		6.001	0.30226	1	234270	+		14802	19068	10203	10212	17059	17059					0.035987740943483004
HSAAHPLKIV	10	Unmodified	_HSAAHPLKIV_					0	0	0		ENST00000514870.1_3_4:106068953-106111627:+|nuORF;ENST00000305737.6_2_4:106067237-106111627:+|nuORF;ENST00000513237.5_1_4:106068073-106111627:+|nuORF	ENST00000514870.1_3_4:106068953-106111627:+|nuORF	ENST00000514870.1_3_4:106068953-106111627:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.8178100585938	2	536.816733	1071.61891	0.47756	0.00025636	2.599	0.0013952	3.0766	0.0016516	536.8179766266068	18.437	0.37381	17.96	17.75	18.124	-0.47694					21	7	4	0	0	0	0.86589	1	384	384		29.15	2.4566	1	164000			14803	9852	10204	10213	17060	17060					0.08596844325393249
HSAELDKVIKK	11	Unmodified	_HSAELDKVIKK_					0	0	0			REV__ENSG00000143079|ENST00000271277|CTTNBP2NL	REV__ENSG00000143079|ENST00000271277|CTTNBP2NL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3727416992188	2	634.372069	1266.72959	6.8434	0.0043413	1.2949	0.00082147	8.1384	0.0051628	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.77421	1	13814	13814		16.717	2.5803	1	75725	+		14804	19769	10205	10214	17061	17061					0.10689019522965282
HSALDEFRLG	10	Unmodified	_HSALDEFRLG_					0	0	0			REV__ENST00000414084.1_1_3:178785539-178789305:-|nuORF	REV__ENST00000414084.1_1_3:178785539-178789305:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.7880859375	2	572.790912	1143.56727	0.50268	0.00028793	-0.77012	-0.00044112	-0.26744	-0.00015319	572.7901523205119	59.355	0.43452	59.45	59.325	59.76	0.094059					16	10	2	0	0	0	0.86471	1	5081	5081		30.318	1.1477	1	94869	+		14805	26402	10206	10215	17062	17062					0.001230558408451543
HSALDEFRLG	10	Unmodified	_HSALDEFRLG_					0	0	0			REV__ENST00000414084.1_1_3:178785539-178789305:-|nuORF	REV__ENST00000414084.1_1_3:178785539-178789305:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	572.790912	1143.56727	0.50268	0.00028793	-0.77012	-0.00044112	-0.26744	-0.00015319	572.7901523205119	59.355	0.43452	59.45	59.325	59.76	0.094059	-0.019535	6.3859E-05	NaN	30.318	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94869	+		14806	26402	10206	10215							0.001230558408451543
HSALDEFRLG	10	Unmodified	_HSALDEFRLG_					0	0	0			REV__ENST00000414084.1_1_3:178785539-178789305:-|nuORF	REV__ENST00000414084.1_1_3:178785539-178789305:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	572.790912	1143.56727	0.50054	0.00028671	-0.87912	-0.00050355	-0.37857	-0.00021684	572.7896639755646	59.375	0.43861	59.489	59.25	59.689	0.11397	0.019535	-6.1008E-05	NaN	30.318	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69692	+		14807	26402	10206	10215							0.001230558408451543
HSAPNFAP	8	Unmodified	_HSAPNFAP_					0	0	0			REV__nc|ENSG00000185104|Q9UNN5-2|FAF1	REV__nc|ENSG00000185104|Q9UNN5-2|FAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.7035827636719	2	420.703577	839.392602	1.2206	0.00051351	-0.68102	-0.00028651	0.53959	0.00022701	420.7031344648382	36.012	0.90686	36.021	35.705	36.612	0.0092773					38	19	3	0	0	0	0.93786	1	2295	2295		53.351	5.4358	1	139740	+		14808	22737	10207	10216	17063	17063					-0.03351899513677381
HSASPVVFTSA	11	Unmodified	_HSASPVVFTSA_					0	0	0		nc|ENSG00000197555|O43166-3|SIPA1L1;ENSG00000197555|ENST00000381232|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	551.779052734375	2	551.780013	1101.54547	-1.5043	-0.00083005	-2.0662	-0.0011401	-3.5705	-0.0019701	551.77864396301	30.515	0.43739	30.515	30.237	30.674	0					28	17	2	0	0	0	0.63176	1	1401	1401		40.778	1.5253	1	67618			14809	8174	10208	10217	17064	17064					-0.0012374890768569458
HSATLETREG	10	Unmodified	_HSATLETREG_					0	0	0		nc|ENSG00000144488|Q6ZVH7-2|ESPNL;ENSG00000144488|ENST00000343063|ESPNL	nc|ENSG00000144488|Q6ZVH7-2|ESPNL	nc|ENSG00000144488|Q6ZVH7-2|ESPNL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.7717895507812	2	550.770177	1099.5258	0.20093	0.00011067	3.0117	0.0016588	3.2127	0.0017694	550.7716334502886	66.287	1.0768	66.252	66.005	67.082	-0.035217					118	49	3	0	0	0	0.19302	1	6347	6347		87.696	0	1	1422100			14810	4713	10209	10218	17065	17065					-0.0199812491848661
HSATTIGNK	9	Unmodified	_HSATTIGNK_					0	0	0		nc|ENSG00000172534|P51610-2|HCFC1;ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1;nc|ENSG00000172534|P51610-3|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.7471618652344	2	464.745973	927.477394	0.057741	2.6835E-05	-0.38869	-0.00018064	-0.33094	-0.00015381	464.74574618644397	17.154	0.27273	16.543	16.386	16.659	-0.6107					9	5	2	0	0	0	0.64555	1	223	223		44.377	0	1	91970			14811	6775	10210	10219	17066	17066					0.010754262322734576
HSATTIGNK	9	Unmodified	_HSATTIGNK_					0	0	0		nc|ENSG00000172534|P51610-2|HCFC1;ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1;nc|ENSG00000172534|P51610-3|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	464.745973	927.477394	0.1463	6.7993E-05	-0.45082	-0.00020952	-0.30452	-0.00014152	464.7457252871868	17.119	0.35825	16.636	16.493	16.851	-0.48256	0.046667	-2.4393E-05	NaN	44.377	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72572			14812	6775	10210	10219							0.010754262322734576
HSCSPRPWVQ	10	Unmodified	_HSCSPRPWVQ_					0	0	0			REV__ENST00000215095.10_2_16:31001393-31001717:-|nuORF	REV__ENST00000215095.10_2_16:31001393-31001717:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	599.2861328125	2	598.785107	1195.55566	-0.95349	-0.00057093	1.3292	0.00079589	0.37569	0.00022496	599.2881706845951	51.238	0.45379	51.238	51.099	51.553	0					18	11	2	0	0	0	0.67571	1	4161	4161		45.972	1.5951	1	81045	+		14813	24113	10211	10220	17067	17067					-0.034294644541205344
HSDPESDFY	9	Unmodified	_HSDPESDFY_					0	0	0		nc|ENSG00000119760|O94864-2|SUPT7L;ENSG00000119760|ENST00000337768|SUPT7L	nc|ENSG00000119760|O94864-2|SUPT7L	nc|ENSG00000119760|O94864-2|SUPT7L	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.7117309570312	2	548.714536	1095.41452	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.387	1	44.384	43.884	44.884	-0.002449								0	0	0	0.2969	1	3469	3469		31.955	7.7521	1				14814	3093	10212	10221	17068	17068					-0.12937184346424146
HSEGDSFRKS	10	Unmodified	_HSEGDSFRKS_					0	0	0		nc|ENSG00000182463|Q9NRE2-2|TSHZ2;ENSG00000182463|ENST00000371497|TSHZ2	nc|ENSG00000182463|Q9NRE2-2|TSHZ2	nc|ENSG00000182463|Q9NRE2-2|TSHZ2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.8497314453125	2	575.267801	1148.52105	-0.40024	-0.00023025	-2.4239	-0.0013944	-2.8242	-0.0016246	575.266721235785	51.151	0.2915	51.586	51.367	51.659	0.43505					8	6	2	0	0	0	0.37624	1	5040	5040		14.137	0	1	114660			14815	7456	10213	10222	17069	17069					-0.04727009061230092
HSEPWPQEDI	10	Unmodified	_HSEPWPQEDI_					0	0	0			REV__nc|ENSG00000130224|Q5VUJ6-2|LRCH2	REV__nc|ENSG00000130224|Q5VUJ6-2|LRCH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.2750244140625	2	619.277835	1236.54112	-0.20247	-0.00012538	-3.0089	-0.0018634	-3.2114	-0.0019887	619.2759849904619	74.161	0.74805	74.552	74.164	74.912	0.3911					33	17	3	0	0	0	0.38353	1	8352	8352		65.465	1.2581	1	684330	+		14816	18856	10214	10223	17070	17070					-0.0676925812126683
HSESLELVRVP	11	Unmodified	_HSESLELVRVP_					0	0	0			REV__ENST00000520579.5_1_5:149495328-149514444:-|nuORF	REV__ENST00000520579.5_1_5:149495328-149514444:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3687744140625	2	633.346052	1264.67755	1.4669	0.00092908	4.3234	0.0027382	5.7904	0.0036673	633.3490543213071	97.248	0.40916	97.479	97.33	97.739	0.23103					11	9	2	0	0	0	0.17502	1	10049	10049		29.17	0	1	66043	+		14817	18009	10215	10224	17071	17071					0.0557985610923879
HSEYHTLLY	9	Unmodified	_HSEYHTLLY_					0	0	0		ENSG00000108840|ENST00000682912|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.77978515625	2	581.780013	1161.54547	-0.53064	-0.00030872	-0.2437	-0.00014178	-0.77434	-0.0004505	581.7797517853181	44.667	0.96264	44.644	44.263	45.226	-0.023079					61	21	4	0	0	0	0.09311	2	3474	3474;3486		94.006	24.379	1	638170			14818	2435	10216	10225	17072;17073	17072					-0.028837489076977363
HSEYHTLLY	9	Unmodified	_HSEYHTLLY_					0	0	0		ENSG00000108840|ENST00000682912|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.7786865234375	2	581.780013	1161.54547	-0.59621	-0.00034686	-0.15331	-8.9195E-05	-0.74952	-0.00043606	581.7797705002921	44.598	1.006	44.564	44.226	45.232	-0.033474					54	22	3	0	0	0	0.034856	3	3557	3557;3569;3583		115.46	19.269	1	703860			14819	2435	10216	10225	17074;17075;17076	17074					-0.028837489076977363
HSEYHTLLY	9	Unmodified	_HSEYHTLLY_					0	0	0		ENSG00000108840|ENST00000682912|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.7794189453125	2	581.780013	1161.54547	-1.0855	-0.00063151	0.34372	0.00019997	-0.74176	-0.00043154	581.7800280206288	44.594	0.94244	44.59	44.244	45.187	-0.0041618					66	21	4	0	0	0	0.09311	3	3496	3485;3496;3508		94.006	29.799	1	701390			14820	2435	10216	10225	17077;17078;17079	17078					-0.028837489076977363
HSEYHTLLY	9	Unmodified	_HSEYHTLLY_					0	0	0		ENSG00000108840|ENST00000682912|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	581.780013	1161.54547	0.60973	0.00035473	-1.3584	-0.0007903	-0.74869	-0.00043557	582.2807522429117	44.5	0.56094	44.508	44.334	44.895	0.0084572	-0.032289	-0.0015012	NaN	115.46	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99798			14821	2435	10216	10225							-0.028837489076977363
HSEYHTLLY	9	Unmodified	_HSEYHTLLY_					0	0	0		ENSG00000108840|ENST00000682912|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	581.780013	1161.54547	0.37511	0.00021823	-0.987	-0.00057421	-0.61189	-0.00035598	582.2808636865544	44.468	0.44498	44.517	44.336	44.781	0.048996	-0.023765	-0.001069	NaN	115.46	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99572			14822	2435	10216	10225							-0.028837489076977363
HSEYHTLLY	9	Unmodified	_HSEYHTLLY_					0	0	0		ENSG00000108840|ENST00000682912|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	ENSG00000108840|ENST00000682912|HDAC5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	581.780013	1161.54547	0.19745	0.00011487	-0.66147	-0.00038483	-0.46402	-0.00026996	581.7792678511438	44.478	0.53605	44.42	44.242	44.778	-0.058262	-0.1208	-0.00069024	NaN	115.46	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89621			14823	2435	10216	10225							-0.028837489076977363
HSFRKILQW	9	Unmodified	_HSFRKILQW_					0	0	0		ENSG00000183035|ENST00000329312|CYLC1	ENSG00000183035|ENST00000329312|CYLC1	ENSG00000183035|ENST00000329312|CYLC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.9000549316406	3	405.564614	1213.67201	-1.8662	-0.00075687	2.1645	0.00087783	0.29825	0.00012096	405.5653987385133	59.885	1.7634	59.979	59.006	60.769	0.094059					140	62	3	0	0	0	0.7932	1	5198	5198		20.837	0	1	349460			14824	7496	10217	10226	17080	17080					0.07372222108097048
HSFVEAFKSNN	11	Unmodified	_HSFVEAFKSNN_					0	0	0		ENST00000515565.1_1_5:55135402-55135780:-|nuORF	ENST00000515565.1_1_5:55135402-55135780:-|nuORF	ENST00000515565.1_1_5:55135402-55135780:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3583984375	2	640.306926	1278.5993	-0.069658	-4.4602E-05	1.2127	0.0007765	1.143	0.0007319	640.8093775570981	99.735	0.24866	99.776	99.588	99.837	0.041107					8	5	2	0	0	0	0.17347	1	10565	10565		22.58	0	1	42745			14825	13085	10218	10227	17081	17081					-0.028855764759782687
HSGKKLAH	8	Unmodified	_HSGKKLAH_					0	0	0			REV__nc|ENSG00000124493|Q14833-3|GRM4	REV__nc|ENSG00000124493|Q14833-3|GRM4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2732238769531	2	439.253769	876.492984	-1.446	-0.00063518	2.7167	0.0011933	1.2707	0.00055815	439.2545251423522	105.98	0.77002	106.13	105.83	106.6	0.14843					22	18	2	0	0	0	0.4196	1	11355	11355		24.203	0	1	173790	+		14826	18590	10219	10228	17082	17082					0.04979757539979346
HSGLRPLPN	9	Unmodified	_HSGLRPLPN_					0	0	0			REV__ENST00000428043.5_3_17:61574373-61574724:+|nuORF	REV__ENST00000428043.5_3_17:61574373-61574724:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7925720214844	2	495.777608	989.540663	-0.97048	-0.00048114	-0.44022	-0.00021825	-1.4107	-0.0006994	495.77719546510775	26.622	0.53472	26.594	26.31	26.845	-0.027706					16	10	2	0	0	0	0.20789	1	1166	1166		19.997	0	1	28569	+		14827	26577	10220	10229	17083	17083					0.04547411740179541
HSHFCSQRS	9	Unmodified	_HSHFCSQRS_					0	0	0		ENST00000176763.9_1_5:171471326-171471623:-|nuORF	ENST00000176763.9_1_5:171471326-171471623:-|nuORF	ENST00000176763.9_1_5:171471326-171471623:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.7459106445312	2	544.738157	1087.46176	-0.49607	-0.00027023	3.0183	0.0016442	2.5222	0.0013739	544.7396970662978	40.406	0.53804	40.363	40.051	40.589	-0.043694					18	12	2	0	0	0	0.64555	1	2978	2978		44.377	2.9506	1	138440			14828	9087	10221	10230	17084	17084					-0.07847183556395976
HSHHRPLRVP	10	Unmodified	_HSHHRPLRVP_					0	0	0			REV__ENST00000540386.5_1_11:66131737-66133984:-|nuORF	REV__ENST00000540386.5_1_11:66131737-66133984:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	618.345458984375	2	618.347055	1234.67956	-1.2296	-0.00076029	-0.6098	-0.00037707	-1.8394	-0.0011374	618.3465539597456	97.787	3.3462	97.982	96.915	100.26	0.19585					219	77	4	0	0	0	0.86218	1	10144	10144		32.812	1.1781	1	806570	+		14829	28462	10222	10231	17085	17085					0.07160374428349314
HSHVLVPVLPR	11	Unmodified	_HSHVLVPVLPR_					0	0	0		ENST00000540651.5_1_1:228286285-228286639:+|nuORF	ENST00000540651.5_1_1:228286285-228286639:+|nuORF	ENST00000540651.5_1_1:228286285-228286639:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8851318359375	2	627.377489	1252.74043	6.5832	0.0041301	1.563	0.00098061	8.1462	0.0051107	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.7342	1	13795	13795		25.574	2.0514	1	94412			14830	13501	10223	10232	17086	17086					0.1241646668793237
HSIARKGT	8	Unmodified	_HSIARKGT_					0	0	0		ENST00000458319.1_1_7:14230834-14230924:+|nuORF	ENST00000458319.1_1_7:14230834-14230924:+|nuORF	ENST00000458319.1_1_7:14230834-14230924:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2514953613281	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.87922	1	7492	7492		31.955	0	1	3322700			14831	11988	10224	10233	17087	17087					0.04839453677391248
HSIARKGT	8	Unmodified	_HSIARKGT_					0	0	0		ENST00000458319.1_1_7:14230834-14230924:+|nuORF	ENST00000458319.1_1_7:14230834-14230924:+|nuORF	ENST00000458319.1_1_7:14230834-14230924:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25140380859375	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.89043	1	9349	9349		35.618	2.8059	1	2235800			14832	11988	10224	10233	17088	17088					0.04839453677391248
HSIEVVPGAI	10	Unmodified	_HSIEVVPGAI_					0	0	0			REV__ENSG00000146918|ENST00000356309|NCAPG2	REV__ENSG00000146918|ENST00000356309|NCAPG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.2872314453125	2	511.287474	1020.5604	-1.2853	-0.00065715	-0.086664	-4.431E-05	-1.3719	-0.00070146	511.2874104215347	41.926	2.0437	41.929	41.503	43.546	0.0034142					109	48	4	0	0	0	0.5766	1	3223	3223		51.335	3.6781	1	7262400	+		14833	20042	10225	10234	17089	17089					0.05093742960275449
HSIIKKRKPK	10	Unmodified	_HSIIKKRKPK_					0	0	0			REV__ENST00000504693.2_1_4:116550597-116550759:+|nuORF	REV__ENST00000504693.2_1_4:116550597-116550759:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2739562988281	3	412.275063	1233.80336	-1.7607	-0.0007259	-2.6408	-0.0010887	-4.4015	-0.0018146	412.2738236205594	48.219	1.4948	48.219	47.775	49.27	0					86	38	4	0	0	0	0.37624	1	3853	3853		1.6353	0	1	151810	+		14834	27863	10226	10235	17090	17090					0.19581032475980464
HSILFKLN	8	Unmodified	_HSILFKLN_					0	0	0			REV__ENST00000512068.1_1_4:3230383-3230554:+|nuORF	REV__ENST00000512068.1_1_4:3230383-3230554:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.2669372558594	2	486.287277	970.560001	-1.6559	-0.00080525	-3.4967	-0.0017004	-5.1526	-0.0025057	486.28487715333097	87.9	1.1349	88.069	87.48	88.615	0.16923					43	26	2	0	0	0	0.4196	1	8598	8598		21.96	15.647	1	63080	+		14835	27976	10227	10236	17091	17091					0.07354368031087688
HSKFQLKFV	9	Unmodified	_HSKFQLKFV_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.330322265625	2	567.326934	1132.63931	1.5887	0.00090129	3.6924	0.0020948	5.2811	0.0029961	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.76764	1	9353	9353		34.173	2.2177	1	5459400	+		14836	16105	10228	10237	17092	17092					0.07830014985211164
HSKFQLKFV	9	Unmodified	_HSKFQLKFV_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3289794921875	2	567.326934	1132.63931	1.8589	0.0010546	3.176	0.0018018	5.0349	0.0028564	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.76996	1	10104	10104		33.516	1.5607	1	15439000	+		14837	16105	10228	10237	17093	17093					0.07830014985211164
HSKFVILSA	9	Unmodified	_HSKFVILSA_					0	0	0		ENSG00000111859|ENST00000379446|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;ENSG00000050820|ENST00000162330|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-2|BCAR1;ENST00000566982.1_1_16:75263411-75272069:-|nuORF;nc|ENSG00000050820|P56945-4|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	ENSG00000111859|ENST00000379446|NEDD9;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	nc|ENSG00000050820|P56945-6|BCAR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2906494140625	2	501.292559	1000.57057	-0.94239	-0.00047241	-3.1642	-0.0015862	-4.1066	-0.0020586	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.76255	1	8436	8436		35.618	2.8059	1	6939200			14838	14751;14752;2617	10229	10238	17094	17094					0.07030350685533904
HSKFVILSA	9	Unmodified	_HSKFVILSA_					0	0	0		ENSG00000111859|ENST00000379446|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;ENSG00000050820|ENST00000162330|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-2|BCAR1;ENST00000566982.1_1_16:75263411-75272069:-|nuORF;nc|ENSG00000050820|P56945-4|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	ENSG00000111859|ENST00000379446|NEDD9;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	nc|ENSG00000050820|P56945-6|BCAR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904357910156	2	501.292559	1000.57057	-0.36653	-0.00018374	-3.8537	-0.0019318	-4.2202	-0.0021156	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.76255	1	8706	8706		35.618	0.46626	1	9903700			14839	14751;14752;2617	10229	10238	17095	17095					0.07030350685533904
HSKIHSIRSL	10	Unmodified	_HSKIHSIRSL_					0	0	0		ENSG00000152767|ENST00000319562|FARP1;nc|ENSG00000152767|Q9Y4F1-2|FARP1	ENSG00000152767|ENST00000319562|FARP1	ENSG00000152767|ENST00000319562|FARP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.34326171875	2	589.343646	1176.67274	-0.65438	-0.00038565	-0.61013	-0.00035958	-1.2645	-0.00074523	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.8545	1	10237	10237		36.447	9.6506	1	16804000			14840	5199	10230	10239	17096	17096					0.09147016757151505
HSKKEVHRI	9	Unmodified	_HSKKEVHRI_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.330322265625	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.7932	1	10883	10883		26.693	2.4902	1	6182600	+		14841	20239	10231	10240	17097	17097					0.0855074758567298
HSKKEVHRI	9	Unmodified	_HSKKEVHRI_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.330078125	2	567.330539	1132.64652	-0.50942	-0.00028901	0.5149	0.00029212	0.0054817	3.1099E-06	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.77696	1	10822	10822		31.53	4.7337	1	5685000	+		14842	20239	10231	10240	17098	17098					0.0855074758567298
HSKKGRKSPKV	11	Unmodified	_HSKKGRKSPKV_					0	0	0		ENST00000378204.6_1_8:119122879-119123155:-|nuORF	ENST00000378204.6_1_8:119122879-119123155:-|nuORF	ENST00000378204.6_1_8:119122879-119123155:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3903198242188	2	626.385845	1250.75714	0.93163	0.00058356	0.7057	0.00044204	1.6373	0.0010256	626.3860365402599	114.78	6.8491	114.81	113.18	120.03	0.026466					343	235	2	0	0	0	0.7434	1	13055	13055		23.523	2.5758	1	402840			14843	10859	10232	10241	17099	17099					0.14178967573889167
HSKKGRKSPKV	11	Unmodified	_HSKKGRKSPKV_					0	0	0		ENST00000378204.6_1_8:119122879-119123155:-|nuORF	ENST00000378204.6_1_8:119122879-119123155:-|nuORF	ENST00000378204.6_1_8:119122879-119123155:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3909301757812	2	626.385845	1250.75714	0.92582	0.00057992	0.01094	6.8528E-06	0.93676	0.00058677	626.3856090976954	109.63	0.16634	109.71	109.62	109.78	0.078552					10	7	2	0	0	0	0.73893	1	11771	11771		24.519	4.5224	1	688630			14844	10859	10232	10241	17100	17100					0.14178967573889167
HSKKGRKSPKV	11	Unmodified	_HSKKGRKSPKV_					0	0	0		ENST00000378204.6_1_8:119122879-119123155:-|nuORF	ENST00000378204.6_1_8:119122879-119123155:-|nuORF	ENST00000378204.6_1_8:119122879-119123155:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3883056640625	2	626.385845	1250.75714	-1.2033	-0.00075372	2.5834	0.0016182	1.3801	0.00086446	626.3871390536368	109.94	1.1883	109.95	109.68	110.87	0.0060501					79	40	3	0	0	0	0.6921	1	11691	11691		32.812	3.6424	1	879220			14845	10859	10232	10241	17101	17101					0.14178967573889167
HSKKKKRH	8	Unmodified	_HSKKKKRH_					0	0	0			REV__nc|ENSG00000166432|Q5H9K5-2|ZMAT1	REV__nc|ENSG00000166432|Q5H9K5-2|ZMAT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8269653320312	2	524.827966	1047.64138	-0.63595	-0.00033377	-1.2498	-0.00065593	-1.8858	-0.0009897	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.89962	1	10218	10218		38.806	4.6336	1	15330000	+		14846	21293	10233	10242	17102	17102					0.1194648851369493
HSKKKKRH	8	Unmodified	_HSKKKKRH_					0	0	0			REV__nc|ENSG00000166432|Q5H9K5-2|ZMAT1	REV__nc|ENSG00000166432|Q5H9K5-2|ZMAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8269653320312	2	524.827966	1047.64138	-0.038995	-2.0466E-05	-2.0451	-0.0010733	-2.0841	-0.0010938	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.84341	1	10737	10737		24.203	0	1	26414000	+		14847	21293	10233	10242	17103	17103					0.1194648851369493
HSKKKNKVLIK	11	Unmodified	_HSKKKNKVLIK_					0	0	0			REV__nc|ENSG00000182621|Q9NQ66-2|PLCB1	REV__nc|ENSG00000182621|Q9NQ66-2|PLCB1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.9094543457031	3	441.625873	1321.85579	0.0213	9.4066E-06	0.33286	0.000147	0.35416	0.0001564	441.62594266527384	15.526	0.26368	15.584	15.437	15.7	0.057872					17	7	3	0	0	0	0.17243	1	27	27		35.178	18.011	1	244120	+		14848	22537	10234	10243	17104	17104					0.20773570818914777
HSKKLNKKKGG	11	Unmodified	_HSKKLNKKKGG_					0	0	0		ENSG00000145703|ENST00000274364|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2;nc|ENSG00000145703|Q13576-2|IQGAP2	ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.92218017578125	3	408.922689	1223.74624	-1.9234	-0.00078652	0.84702	0.00034637	-1.0764	-0.00044016	408.9230151046432	104.46	2.832	104.56	103.59	106.42	0.093857					212	70	5	0	0	0	0.73893	1	11010	11010		27.644	0.59661	1	2027500			14849	4784	10235	10244	17105	17105					0.14331565199586294
HSKLRQLVR	9	Unmodified	_HSKLRQLVR_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8536987304688	2	568.854181	1135.69381	-0.36185	-0.00020584	-1.2386	-0.0007046	-1.6005	-0.00091044	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.78983	1	10614	10614		27.882	2.3082	1	34546000	+		14850	24025	10236	10245	17106	17106					0.1313902685665198
HSKRISHIK	9	Unmodified	_HSKRISHIK_					0	0	0			REV__ENSG00000178235|ENST00000674365|SLITRK1	REV__ENSG00000178235|ENST00000674365|SLITRK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.332275390625	2	553.333082	1104.65161	2.7435	0.0015181	-3.9365	-0.0021782	-1.193	-0.00066013	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.78124	1	10457	10457		30.318	2.4355	1	4237100	+		14851	22269	10237	10246	17107	17107					0.10347051448275124
HSKRISHIK	9	Unmodified	_HSKRISHIK_					0	0	0			REV__ENSG00000178235|ENST00000674365|SLITRK1	REV__ENSG00000178235|ENST00000674365|SLITRK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.332275390625	2	553.333082	1104.65161	1.2853	0.00071117	-2.555	-0.0014138	-1.2698	-0.00070261	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.78124	1	10313	10313		30.318	4.8675	1	4524400	+		14852	22269	10237	10246	17108	17108					0.10347051448275124
HSKSKDKK	8	Unmodified	_HSKSKDKK_					0	0	0		ENSG00000104321|ENST00000262209|TRPA1	ENSG00000104321|ENST00000262209|TRPA1	ENSG00000104321|ENST00000262209|TRPA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2778625488281	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.8347	1	7787	7787		23.042	1.0826	1	1802300			14853	2125	10238	10247	17109	17109					0.060319920203255606
HSKTLIWAKIV	11	Unmodified	_HSKTLIWAKIV_					0	0	0		L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|165|3|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|165|3|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|165|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3924560546875	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75906	1	12433	12433		20.03	1.7684	1	2297700			14854	14549	10239	10248	17110	17110					0.14054504144928615
HSKVRKSA	8	Unmodified	_HSKVRKSA_					0	0	0			REV__ENSG00000174776|ENST00000682715|WDR49	REV__ENSG00000174776|ENST00000682715|WDR49	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7724914550781	2	456.772326	911.530098	0.66367	0.00030315	-0.37052	-0.00016924	0.29315	0.0001339	456.77188114676403	89.921	1.592	90.073	89.44	91.032	0.1519					92	37	4	0	0	0	0.87922	1	9029	9029		31.955	5.1588	1	1022900	+		14855	22012	10240	10249	17111	17111					0.07079429085752054
HSKWICSF	8	Unmodified	_HSKWICSF_					0	0	0			REV__ENST00000543542.1_1_12:6497568-6498105:+|nuORF	REV__ENST00000543542.1_1_12:6497568-6498105:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.210205078125	2	504.242012	1006.46947	0.57144	0.00028814	-1.4026	-0.00070727	-0.8312	-0.00041912	504.2413697928946	81.319	1.733	81.819	80.416	82.149	0.49967					70	41	2	0	0	0	0.4196	1	9330	9330		31.955	5.1588	1	380150	+		14856	17864	10241	10250	17112	17112					-0.03350424288839804
HSKWSVAL	8	Unmodified	_HSKWSVAL_					0	0	0			REV__ENST00000248054.9_2_19:16989785-16989902:+|nuORF	REV__ENST00000248054.9_2_19:16989785-16989902:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2536315917969	2	464.255977	926.497401	-1.1813	-0.00054845	-2.9805	-0.0013837	-4.1619	-0.0019322	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.89962	1	7979	7979		38.806	1.647	1	946850	+		14857	24270	10242	10251	17113	17113					0.031212219629082938
HSLAALFF	8	Unmodified	_HSLAALFF_					0	0	0		ENST00000249837.7_1_15:62217673-62219407:-|nuORF	ENST00000249837.7_1_15:62217673-62219407:-|nuORF	ENST00000249837.7_1_15:62217673-62219407:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.2479553222656	2	453.247621	904.480688	0.16896	7.6579E-05	-0.90942	-0.00041219	-0.74046	-0.00033561	453.2470272514559	30.95	0.62531	30.969	30.712	31.337	0.018362					29	17	2	0	0	0	0.88915	1	1639	1639		35.201	3.2459	1	64987			14858	9290	10243	10252	17114	17114					0.024627210769381236
HSLFRQLNR	9	Unmodified	_HSLFRQLNR_					0	0	0			REV__ENSG00000086570|ENST00000261800|FAT2	REV__ENSG00000086570|ENST00000261800|FAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	585.8296508789062	2	585.828163	1169.64177	-0.26334	-0.00015427	3.7066	0.0021714	3.4433	0.0020172	585.830277494987	57.754	1.2846	57.738	57.257	58.542	-0.01643					107	58	2	0	0	0	0.77546	1	4880	4880		31.955	4.0726	1	182280	+		14859	16912	10244	10253	17115	17115					0.06373863442900074
HSLGGSNTNLY	11	Unmodified	_HSLGGSNTNLY_					0	0	0		ENST00000550730.1_1_12:57024629-57030521:-|nuORF	ENST00000550730.1_1_12:57024629-57030521:-|nuORF	ENST00000550730.1_1_12:57024629-57030521:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.7798461914062	2	581.778002	1161.54145	-0.53064	-0.00030872	3.2136	0.0018696	2.6829	0.0015609	581.7797517853181	44.667	0.96264	44.644	44.263	45.226	-0.023079					61	21	4	0	0	0	0.62614	1	3513	3513		41.427	2.1738	1	638170			14860	13660	10245	10254	17116	17116					-0.03285838401438923
HSLGLLIFDTV	11	Unmodified	_HSLGLLIFDTV_					0	0	0			REV__ENSG00000255582|ENST00000542433|OR10G2	REV__ENSG00000255582|ENST00000542433|OR10G2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	607.8387451171875	2	607.842613	1213.67067	-1.1865	-0.00072122	-2.0253	-0.001231	-3.2118	-0.0019523	607.8413603198578	31.993	0.62631	31.993	31.801	32.428	0					37	23	2	0	0	0	0.73893	1	1565	1565		24.519	1.9395	1	97518	+		14861	23900	10246	10255	17117	17117					0.0723854322866373
HSLKAVHLPPL	11	Unmodified	_HSLKAVHLPPL_					0	0	0			REV__ENSG00000204843|ENST00000628224|DCTN1	REV__ENSG00000204843|ENST00000628224|DCTN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3697509765625	2	606.36659	1210.71863	2.2948	0.0013915	2.4855	0.0015071	4.7803	0.0028986	606.3679986963975	94.415	3.2479	94.356	93.249	96.497	-0.059212					198	76	3	0	0	0	0.69995	1	10027	10027		31.53	7.0106	1	800340	+		14862	23522	10247	10256	17118	17118					0.12169661939356047
HSLKRKSSLR	10	Unmodified	_HSLKRKSSLR_					0	0	0			REV__nc|ENSG00000124782|Q92766-5|RREB1	REV__nc|ENSG00000124782|Q92766-5|RREB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.5823974609375	3	404.582556	1210.72584	-0.33509	-0.00013557	0.65931	0.00026675	0.32422	0.00013117	404.58283935188774	30.988	0.89448	30.941	30.538	31.432	-0.047064					48	22	3	0	0	0	0.73395	1	1739	1739		33.039	0	1	104710	+		14863	18611	10248	10257	17119	17119					0.12890394539772387
HSLLGKQHKSG	11	Unmodified	_HSLLGKQHKSG_					0	0	0			REV__nc|ENSG00000105278|Q9UPR6-3|ZFR2	REV__nc|ENSG00000105278|Q9UPR6-3|ZFR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.33203125	2	596.333279	1190.652	1.5761	0.00093988	-2.1147	-0.0012611	-0.53864	-0.00032121	596.3318720869813	95.913	2.9437	96.333	95.271	98.215	0.4205					211	71	4	0	0	0	0.69995	1	11480	11480		31.53	1.2121	1	1079900	+		14864	29756	10249	10258	17120	17120					0.06430426377460208
HSLVIRGAS	9	Unmodified	_HSLVIRGAS_					0	0	0		nc|ENSG00000205213|Q9BXB1-2|LGR4;ENSG00000205213|ENST00000379214|LGR4	nc|ENSG00000205213|Q9BXB1-2|LGR4	nc|ENSG00000205213|Q9BXB1-2|LGR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.27227783203125	2	470.272158	938.529764	-1.7118	-0.000805	1.6827	0.00079131	-0.029114	-1.3691E-05	470.2729404281299	92.166	2.8676	92.352	91.202	94.069	0.18582					129	67	3	0	0	0	0.78983	1	9264	9264		27.882	1.0861	1	1756700			14865	8516	10250	10259	17121	17121					0.058040093658974
HSLVSSQDCQL	11	Unmodified	_HSLVSSQDCQL_					0	0	0		nc|ENSG00000180347|Q6ZRS4-3|ITPRID1;ENSG00000180347|ENST00000615280|ITPRID1;nc|ENSG00000180347|Q6ZRS4-4|ITPRID1;nc|ENSG00000180347|Q6ZRS4-2|ITPRID1	nc|ENSG00000180347|Q6ZRS4-3|ITPRID1	nc|ENSG00000180347|Q6ZRS4-3|ITPRID1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.7822875976562	2	608.78497	1215.55539	0.4097	0.00024942	-1.967	-0.0011975	-1.5573	-0.00094807	608.7830450701787	59.037	1.8079	59.006	58.103	59.911	-0.030888					62	51	2	0	0	0	0.57736	1	5519	5519		46.457	5.0302	1	200150			14866	7327	10251	10260	17122	17122					-0.04376928964643412
HSNSGGQH	8	Unmodified	_HSNSGGQH_					0	0	0			REV__ENST00000599157.5_1_19:49316949-49335986:-|nuORF	REV__ENST00000599157.5_1_19:49316949-49335986:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.17572021484375	2	412.175715	822.336878	-1.8024	-0.00074289	1.3357	0.00055053	-0.46669	-0.00019236	412.1764055196895	94.607	2.9265	94.838	94.324	97.25	0.23103					168	69	5	0	0	0	0.884	1	9647	9647		33.516	1.9367	1	14636000	+		14867	29292	10252	10261	17123	17123					-0.0813973270128372
HSPCLKLL	8	Unmodified	_HSPCLKLL_					0	0	0			REV__ENST00000522677.7_2_8:67479184-67484757:-|nuORF	REV__ENST00000522677.7_2_8:67479184-67484757:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30078125	2	455.762581	909.510608	0.15411	7.0239E-05	-2.1259	-0.0009689	-1.9718	-0.00089866	455.76092970335014	33.618	0.11036	33.728	33.661	33.771	0.10991					6	4	2	0	0	0	0.4196	1	1659	1659		35.201	5.3592	1	32074	+		14868	28133	10253	10262	17124	17124					0.05223336750634644
HSPLGHHPL	9	Unmodified	_HSPLGHHPL_					0	0	0			REV__ENST00000569766.5_1_16:68118971-68260371:+|nuORF	REV__ENST00000569766.5_1_16:68118971-68260371:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.76190185546875	2	497.764501	993.514448	-0.13641	-6.7901E-05	3.2043	0.001595	3.0679	0.0015271	497.76591948761836	65.75	0.73868	66.303	66.082	66.821	0.5526					31	19	2	0	0	0	0.5393	1	7202	7202		50.025	3.2581	1	410870	+		14869	16653	10254	10263	17125	17125					0.017431425686936564
HSPLGHHPL	9	Unmodified	_HSPLGHHPL_					0	0	0			REV__ENST00000569766.5_1_16:68118971-68260371:+|nuORF	REV__ENST00000569766.5_1_16:68118971-68260371:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	497.764501	993.514448	-0.13641	-6.7901E-05	3.2043	0.001595	3.0679	0.0015271	497.76591948761836	65.75	0.73868	66.303	66.082	66.821	0.5526	0.0062681	-0.00054843	NaN	50.025	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410870	+		14870	16653	10254	10263							0.017431425686936564
HSPSDRRRKR	10	Unmodified	_HSPSDRRRKR_					0	0	0			REV__ENSG00000139767|ENST00000267260|SRRM4	REV__ENSG00000139767|ENST00000267260|SRRM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.369873046875	2	647.8636	1293.71265	1.6037	0.001039	1.3899	0.00090045	2.9936	0.0019395	648.3663284130898	112.19	0.28555	112.3	112.2	112.48	0.10638					20	10	2	0	0	0	0.86718	1	12102	12102		27.882	2.3082	1	535890	+		14871	19569	10255	10264	17126	17126					0.07753956480405577
HSPSDRRRKR	10	Unmodified	_HSPSDRRRKR_					0	0	0			REV__ENSG00000139767|ENST00000267260|SRRM4	REV__ENSG00000139767|ENST00000267260|SRRM4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	647.8636	1293.71265	1.6037	0.001039	1.3899	0.00090045	2.9936	0.0019395	648.3663284130898	112.19	0.28555	112.3	112.2	112.48	0.10638	-0.034509	-0.0012781	NaN	27.882	20	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	535890	+		14872	19569	10255	10264							0.07753956480405577
HSPSDRRRKR	10	Unmodified	_HSPSDRRRKR_					0	0	0			REV__ENSG00000139767|ENST00000267260|SRRM4	REV__ENSG00000139767|ENST00000267260|SRRM4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	647.8636	1293.71265	-1.1411	-0.00073928	4.0431	0.0026194	2.902	0.0018801	647.8661333008314	112.32	0.48792	112.29	112.1	112.59	-0.032326	-0.045001	0.0021597	NaN	27.882	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1521800	+		14873	19569	10255	10264							0.07753956480405577
HSPSDRRRKR	10	Unmodified	_HSPSDRRRKR_					0	0	0			REV__ENSG00000139767|ENST00000267260|SRRM4	REV__ENSG00000139767|ENST00000267260|SRRM4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	647.8636	1293.71265	2.0059	0.0012996	0.96995	0.00062839	2.9759	0.001928	648.365815492226	112.38	0.15125	112.41	112.36	112.51	0.030594	0.079509	-0.0018222	NaN	27.882	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49244	+		14874	19569	10255	10264							0.07753956480405577
HSPSFVDD	8	Unmodified	_HSPSFVDD_					0	0	0			REV__ENSG00000158201|ENST00000289119|ABHD3	REV__ENSG00000158201|ENST00000289119|ABHD3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9436950683594	2	452.195782	902.377011	-0.61451	-0.00027788	1.5582	0.00070461	0.94368	0.00042673	452.1972711393661	55.49	0.15036	55.453	55.336	55.486	-0.036823					5	3	2	0	0	0	0.4196	1	4648	4648		6.7355	0	1	17562	+		14875	20596	10256	10265	17127	17127					-0.07808230821376583
HSPVRRHL	8	Unmodified	_HSPVRRHL_					0	0	0		ENSG00000105261|ENST00000633214|OVOL3	ENSG00000105261|ENST00000633214|OVOL3	ENSG00000105261|ENST00000633214|OVOL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.8006286621094	2	501.291217	1000.56788	0.38549	0.00019324	-2.094	-0.0010497	-1.7085	-0.00085646	501.2898812448726	19.023	0.61097	18.394	18.19	18.801	-0.6296					16	13	2	0	0	0	0.4196	1	516	516		20.482	0	1	98424			14876	2196	10257	10266	17128	17128					0.06761940071237404
HSQGKSEAR	9	Unmodified	_HSQGKSEAR_					0	0	0			REV__ENST00000258412.7_1_2:219139270-219139399:-|nuORF	REV__ENST00000258412.7_1_2:219139270-219139399:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.28448486328125	2	500.251954	998.489356	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.202	1	34.156	33.656	34.656	-0.045815								0	0	0	0.301	1	1708	1708		30.318	4.7437	1		+		14877	24355	10258	10267	17129	17129					-0.0099495702453396
HSRKVAYLLI	10	Unmodified	_HSRKVAYLLI_					0	0	0			REV__MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|81|3|anti-sense	REV__MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|81|3|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.91619873046875	3	400.580152	1198.71863	-0.18598	-7.4498E-05	1.2588	0.00050424	1.0728	0.00042974	400.58047362638064	112.54	0.2858	112.48	112.44	112.73	-0.063889					14	8	2	0	0	0	0.8486	1	12232	12232		18.262	2.929	1	148470	+		14878	29664	10259	10268	17130	17130					0.12721661939372098
HSRPLIFI	8	Unmodified	_HSRPLIFI_					0	0	0		nc|ENSG00000161298|Q96SR6-3|ZNF382;nc|ENSG00000161298|Q96SR6-2|ZNF382;ENSG00000161298|ENST00000292928|ZNF382	nc|ENSG00000161298|Q96SR6-3|ZNF382	nc|ENSG00000161298|Q96SR6-3|ZNF382	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7954406738281	2	491.795269	981.575986	-0.86128	-0.00042357	1.3952	0.00068615	0.53392	0.00026258	491.79583711541846	45.285	1.262	45.254	44.708	45.97	-0.031067					74	28	3	0	0	0	0.87479	1	3641	3641		30.504	5.0535	1	480390			14879	5633	10260	10269	17131	17131					0.08446074267999393
HSSSVLYHSL	10	Unmodified	_HSSSVLYHSL_					0	0	0			REV__ENSG00000187091|ENST00000334661|PLCD1	REV__ENSG00000187091|ENST00000334661|PLCD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.3082275390625	2	565.285463	1128.55637	-0.14964	-8.4588E-05	-1.1994	-0.00067799	-1.349	-0.00076258	565.2845705386413	74.411	0.40953	74.802	74.623	75.033	0.3911					14	9	2	0	0	0	0.37624	1	8407	8407		20.947	0	1	69280	+		14880	22901	10261	10270	17132	17132					-0.002763465334282955
HSTAALSSY	9	Unmodified	_HSTAALSSY_					0	0	0		nc|ENSG00000082556|P41145-2|OPRK1;ENSG00000082556|ENST00000265572|OPRK1	nc|ENSG00000082556|P41145-2|OPRK1	nc|ENSG00000082556|P41145-2|OPRK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.72283935546875	2	468.724707	935.43486	0.56743	0.00026597	-3.7241	-0.0017456	-3.1567	-0.0014796	468.72291499922926	77.981	1.1018	78.118	77.808	78.91	0.13667					89	33	4	0	0	0	0.78058	1	7337	7337		30.504	1.3541	1	747220			14881	1488	10262	10271	17133	17133					-0.03543968895939997
HSTAALSSY	9	Unmodified	_HSTAALSSY_					0	0	0		nc|ENSG00000082556|P41145-2|OPRK1;ENSG00000082556|ENST00000265572|OPRK1	nc|ENSG00000082556|P41145-2|OPRK1	nc|ENSG00000082556|P41145-2|OPRK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7236328125	2	468.724707	935.43486	-0.58063	-0.00027215	-3.1666	-0.0014842	-3.7472	-0.0017564	468.72346030200146	77.011	2.0488	77.579	77.289	79.337	0.56836					141	50	5	0	0	0	0.78536	1	8818	8818		29.15	2.3535	1	13648000			14882	1488	10262	10271	17134	17134					-0.03543968895939997
HSTGLSEFG	9	Unmodified	_HSTGLSEFG_					0	0	0		ENST00000397677.5_1_8:23118991-23119336:+|nuORF	ENST00000397677.5_1_8:23118991-23119336:+|nuORF	ENST00000397677.5_1_8:23118991-23119336:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.7157897949219	2	467.716882	933.41921	0.51266	0.00023978	-3.3259	-0.0015556	-2.8132	-0.0013158	467.71522088082065	72.056	0.78386	72.186	71.901	72.685	0.1301					42	25	2	0	0	0	0.7932	1	6627	6627		24.203	2.5004	1	143620			14883	11158	10263	10272	17135	17135					-0.050162554129883574
HSTKAYAKG	9	Unmodified	_HSTKAYAKG_					0	0	0			REV__ENSG00000189120|ENST00000536300|SP6	REV__ENSG00000189120|ENST00000536300|SP6	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.75238037109375	2	481.756341	961.498129	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.824	1	67.883	67.383	68.383	0.059288								0	0	0	0.28009	1	6060	6060		39.253	0.23134	1		+		14884	23066	10264	10273	17136	17136					0.015840166119346577
HSTPTPHATT	10	Unmodified	_HSTPTPHATT_					0	0	0			REV__ENST00000435504.8_1_2:25962949-25963207:-|nuORF	REV__ENST00000435504.8_1_2:25962949-25963207:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.2576293945312	2	525.254163	1048.49377	0.95029	0.00049914	-1.2308	-0.00064648	-0.2805	-0.00014733	525.2534040193176	20.413	0.40951	20.343	20.205	20.614	-0.070011					32	18	2	0	0	0	0.5766	1	517	517		51.335	0.14276	1	58318	+		14885	26676	10265	10274	17137	17137					-0.02853492601616381
HSTPVRRSSGP	11	Unmodified	_HSTPVRRSSGP_					0	0	0		ENSG00000075218|ENST00000454366|GTSE1;ENST00000466510.5_1_22:46711975-46722552:+|nuORF;ENST00000479645.1_1_22:46711975-46724816:+|nuORF	ENSG00000075218|ENST00000454366|GTSE1	ENSG00000075218|ENST00000454366|GTSE1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.829833984375	2	590.81271	1179.61087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.197	1	44.138	43.638	44.638	-0.058262								0	0	0	0.56276	1	3097	3097		27.047	0.98393	1				14886	1323	10266	10275	17138	17138					0.028246653379937925
HSTTLYQS	8	Unmodified	_HSTTLYQS_					0	0	0			REV__ENSG00000175322|ENST00000590202|ZNF519	REV__ENSG00000175322|ENST00000590202|ZNF519	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7234191894531	2	468.724707	935.43486	1.0684	0.00050079	-3.4491	-0.0016167	-2.3807	-0.0011159	468.7229595267066	94.221	0.99142	94.654	94.37	95.361	0.4324					49	25	3	0	0	0	0.89043	1	11270	11270		35.618	3.6634	1	660150	+		14887	22060	10267	10276	17139	17139					-0.03543968895939997
HSVAPQKL	8	Unmodified	_HSVAPQKL_					0	0	0			REV__nc|ENSG00000104067|Q07157-2|TJP1	REV__nc|ENSG00000104067|Q07157-2|TJP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2556457519531	2	440.255977	878.497401	0.40701	0.00017919	-1.6183	-0.00071247	-1.2113	-0.00053328	440.25507557275375	63.556	1.6285	64.111	63.598	65.226	0.55449					91	38	4	0	0	0	0.86288	1	6907	6907		26.796	1.3459	1	1465000	+		14888	17434	10268	10277	17140	17140					0.05329221962904285
HSVCWTPGNY	10	Unmodified	_HSVCWTPGNY_					0	0	0		ENST00000474436.1_1_9:35092372-35092447:-|nuORF	ENST00000474436.1_1_9:35092372-35092447:-|nuORF	ENST00000474436.1_1_9:35092372-35092447:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.251953125	2	582.250566	1162.48658	0.84516	0.00049209	1.233	0.00071789	2.0781	0.00121	582.2513600168936	34.842	1.6633	35.223	34.811	36.474	0.3812					134	42	4	0	0	0	0.86471	1	2645	2645		30.318	2.2362	1	1023800			14889	12304	10269	10278	17141	17141					-0.0881654847369191
HSVEWLNGVG	10	Unmodified	_HSVEWLNGVG_					0	0	0			REV__ENST00000556412.4_1_14:77917607-77919698:-|nuORF	REV__ENST00000556412.4_1_14:77917607-77919698:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.273681640625	2	549.272355	1096.53016	-1.3279	-0.00072939	-0.016974	-9.3236E-06	-1.3449	-0.00073872	549.2722721223713	43.521	0.52309	43.521	43.221	43.744	0					23	12	2	0	0	0	0.86471	1	3108	3108		30.318	2.2362	1	162310	+		14890	28698	10270	10279	17142	17142					-0.014246157049228714
HSVIQVAR	8	Unmodified	_HSVIQVAR_					0	0	0			REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3	REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.9658203125	2	455.266876	908.519199	-2.5792	-0.0011742	-1.5175	-0.00069088	-4.0967	-0.0018651	455.26617314940603	40.56	1.7947	40.952	39.795	41.59	0.39209					62	47	2	0	0	0	0.4196	1	3428	3428		16.473	0	1	2119400	+		14891	18198	10271	10280	17143	17143					0.06128026711462553
HSVSPAALKN	10	Unmodified	_HSVSPAALKN_					0	0	0			REV__nc|ENSG00000164053|Q8WXE1-5|ATRIP	REV__nc|ENSG00000164053|Q8WXE1-5|ATRIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2814331054688	2	512.282723	1022.55089	-0.24543	-0.00012573	0.32779	0.00016792	0.082368	4.2196E-05	512.2825483720893	34.208	0.75494	34.152	33.785	34.54	-0.056381					27	16	3	0	0	0	0.86471	1	2135	2135		30.318	3.6248	1	50719	+		14892	21017	10272	10281	17144	17144					0.0405197467475773
HSVVSEHH	8	Unmodified	_HSVVSEHH_					0	0	0			REV__nc|ENSG00000166348|Q70EL1-6|USP54	REV__nc|ENSG00000166348|Q70EL1-6|USP54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.22674560546875	2	466.222665	930.430778	0.58127	0.000271	3.9668	0.0018494	4.5481	0.0021204	466.2253392857724	79.809	0.66165	79.95	79.648	80.31	0.14118					64	30	3	0	0	0	0.88915	1	7578	7578		35.201	1.0282	1	142830	+		14893	21282	10273	10282	17145	17145					-0.037220135989969094
HSWLIKVQKMK	11	Unmodified	_HSWLIKVQKMK_					0	0	0		ENSG00000105929|ENST00000310018|ATP6V0A4	ENSG00000105929|ENST00000310018|ATP6V0A4	ENSG00000105929|ENST00000310018|ATP6V0A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.6068115234375	3	466.607713	1396.80131	-0.1162	-5.4221E-05	0.76719	0.00035798	0.65099	0.00030376	466.608028235663	100.63	2.2402	100.66	99.377	101.62	0.031036					154	52	4	0	0	0	0.74405	1	10620	10620		23.378	9.2919	1	499520			14894	2265	10274	10283	17146	17146					0.11878235675840187
HSYTPTTSR	9	Unmodified	_HSYTPTTSR_					0	0	0		nc|ENSG00000099204|O14639-3|ABLIM1;nc|ENSG00000099204|O14639-5|ABLIM1;nc|ENSG00000099204|O14639-2|ABLIM1;nc|ENSG00000099204|O14639-6|ABLIM1;ENSG00000099204|ENST00000533213|ABLIM1;ENST00000466400.1_1_10:116225424-116227963:-|nuORF;nc|ENSG00000099204|O14639-4|ABLIM1	nc|ENSG00000099204|O14639-3|ABLIM1	nc|ENSG00000099204|O14639-3|ABLIM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.2548828125	2	525.254163	1048.49377	1.0195	0.00053547	-1.0983	-0.0005769	-0.078871	-4.1427E-05	525.2533919831185	20.046	0.50793	20.117	19.862	20.37	0.071129					32	19	2	0	0	0	0.78124	1	456	456		30.318	0.47618	1	42745			14895	1748	10275	10284	17147	17147					-0.028534926016391182
HSYTPTTSR	9	Unmodified	_HSYTPTTSR_					0	0	0		nc|ENSG00000099204|O14639-3|ABLIM1;nc|ENSG00000099204|O14639-5|ABLIM1;nc|ENSG00000099204|O14639-2|ABLIM1;nc|ENSG00000099204|O14639-6|ABLIM1;ENSG00000099204|ENST00000533213|ABLIM1;ENST00000466400.1_1_10:116225424-116227963:-|nuORF;nc|ENSG00000099204|O14639-4|ABLIM1	nc|ENSG00000099204|O14639-3|ABLIM1	nc|ENSG00000099204|O14639-3|ABLIM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.254638671875	2	525.254163	1048.49377	0.95029	0.00049914	-1.2308	-0.00064648	-0.2805	-0.00014733	525.2534040193176	20.413	0.40951	20.343	20.205	20.614	-0.070011					32	18	2	0	0	0	0.48102	2	512	512;522		52.937	13.684	1	58318			14896	1748	10275	10284	17148;17149	17148					-0.028534926016391182
HTAATIRN	8	Unmodified	_HTAATIRN_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9;REV__nc|ENSG00000159433|Q9P2P6-3|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2405700683594	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.90983	1	7704	7704		42.396	6.7778	1	716910	+		14897	20661;29961	10276	10285	17150	17150					0.021228632976999506
HTAATIRN	8	Unmodified	_HTAATIRN_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9;REV__nc|ENSG00000159433|Q9P2P6-3|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2408142089844	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.91472	1	8350	8350		44.117	5.3107	1	1238700	+		14898	20661;29961	10276	10285	17151	17151					0.021228632976999506
HTAATIRN	8	Unmodified	_HTAATIRN_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9;REV__nc|ENSG00000159433|Q9P2P6-3|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2407531738281	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.87064	2	8055	8055;8127		37.159	1.5408	1	1244000	+		14899	20661;29961	10276	10285	17152;17153	17152					0.021228632976999506
HTAATIRN	8	Unmodified	_HTAATIRN_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9;REV__nc|ENSG00000159433|Q9P2P6-3|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2407531738281	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.91977	1	7734	7734		45.952	7.1458	1	1219900	+		14900	20661;29961	10276	10285	17154	17154					0.021228632976999506
HTAATIRN	8	Unmodified	_HTAATIRN_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9;REV__nc|ENSG00000159433|Q9P2P6-3|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2408752441406	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.89494	1	7852	7852		37.159	0	1	1094000	+		14901	20661;29961	10276	10285	17155	17155					0.021228632976999506
HTAFLTFAKLS	11	Unmodified	_HTAFLTFAKLS_					0	0	0			REV__ENSG00000057468|ENST00000263187|MSH4	REV__ENSG00000057468|ENST00000263187|MSH4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	618.3469848632812	2	618.342781	1234.67101	1.2492	0.00077242	3.7041	0.0022904	4.9533	0.0030628	618.344978551102	97.744	3.3917	97.971	96.779	100.17	0.22787					230	79	4	0	0	0	0.72739	1	10250	10250		27.047	0.3544	1	960930	+		14902	16427	10277	10286	17156	17156					0.06305962948522392
HTAHFQKLQ	9	Unmodified	_HTAHFQKLQ_					0	0	0			REV__nc|ENSG00000107959|Q5JRX3-3|PITRM1	REV__nc|ENSG00000107959|Q5JRX3-3|PITRM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.7774658203125	2	555.296165	1108.57778	-0.85692	-0.00047585	1.8298	0.0010161	0.97287	0.00054023	555.2988967862889	64.279	0.71801	64.278	63.88	64.598	-0.00078583					31	22	2	0	0	0	0.20789	1	6026	6026		24.203	0	1	116820	+		14903	17686	10278	10287	17157	17157					0.02783083285930843
HTAIKFPAS	9	Unmodified	_HTAIKFPAS_					0	0	0		ENSG00000256683|ENST00000243644|ZNF350	ENSG00000256683|ENST00000243644|ZNF350	ENSG00000256683|ENST00000243644|ZNF350	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.26702880859375	2	486.269084	970.523616	-0.72647	-0.00035326	-3.2279	-0.0015696	-3.9543	-0.0019229	486.2674012957117	86.085	5.1254	86.27	85.016	90.141	0.18522					327	120	4	0	0	0	0.67345	1	8579	8579		42.396	1.618	1	1830000			14904	8900	10279	10288	17158	17158					0.037174911343640815
HTAKLPDLVI	10	Unmodified	_HTAKLPDLVI_					0	0	0			REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8298950195312	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.82886	1	9297	9297		37.812	1.3648	1	5219600	+		14905	17980	10280	10289	17159	17159					0.10094577919812764
HTAKLPDLVI	10	Unmodified	_HTAKLPDLVI_					0	0	0			REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8300170898438	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.82886	1	9052	9052		37.812	2.1932	1	5453100	+		14906	17980	10280	10289	17160	17160					0.10094577919812764
HTALKQLKGTV	11	Unmodified	_HTALKQLKGTV_					0	0	0		ENST00000491724.1_1_2:63346199-63346415:-|nuORF	ENST00000491724.1_1_2:63346199-63346415:-|nuORF	ENST00000491724.1_1_2:63346199-63346415:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.8563232421875	2	598.361505	1194.70846	-0.10487	-6.275E-05	-3.7081	-0.0022188	-3.8129	-0.0022815	598.3593234657415	94.339	4.754	94.774	93.51	98.264	0.43539					199	117	2	0	0	0	0.6493	1	11250	11250		38.754	8.4359	1	27641000			14907	12689	10281	10290	17161	17161					0.11889054214111638
HTANLNLVLAK	11	Unmodified	_HTANLNLVLAK_					0	0	0		ENST00000481603.1_1_11:5631742-5632569:+|nuORF;nc|ENSG00000121236|Q9C030-3|TRIM6;nc|ENSG00000121236|Q9C030|TRIM6;ENSG00000121236|ENST00000380097|TRIM6	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.856689453125	2	597.35368	1192.69281	1.5032	0.00089792	2.5027	0.001495	4.0059	0.0023929	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.69995	1	10950	10950		31.53	1.2121	1	1501500			14908	3170	10282	10291	17162	17162					0.10416767697074647
HTAQRLGG	8	Unmodified	_HTAQRLGG_					0	0	0			REV__ENST00000567562.5_1_16:20817381-20817480:-|nuORF	REV__ENST00000567562.5_1_16:20817381-20817480:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2274169921875	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.88915	1	8011	8011		35.201	0	1	888480	+		14909	28880	10283	10292	17163	17163					0.015265941262441629
HTAQRLGG	8	Unmodified	_HTAQRLGG_					0	0	0			REV__ENST00000567562.5_1_16:20817381-20817480:-|nuORF	REV__ENST00000567562.5_1_16:20817381-20817480:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2275390625	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.884	1	7356	7356		33.516	1.5607	1	831720	+		14910	28880	10283	10292	17164	17164					0.015265941262441629
HTASGYYT	8	Unmodified	_HTASGYYT_					0	0	0		ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.274169921875	2	450.198325	898.382096	1.679	0.00075591	3.4787	0.0015661	5.1577	0.002322	450.1998611814653	92.919	0.21075	92.858	92.677	92.888	-0.06144					7	4	3	0	0	0	0.4196	1	9812	9812		42.474	28.699	1	21339			14911	1150	10284	10293	17165	17165					-0.07115926958761065
HTASHVLRR	9	Unmodified	_HTASHVLRR_					0	0	0			REV__ENST00000409382.7_1_2:107460466-107502632:-|nuORF	REV__ENST00000409382.7_1_2:107460466-107502632:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.8067016601562	2	538.807231	1075.59991	0.74987	0.00040403	-1.7394	-0.00093719	-0.98952	-0.00053316	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.76764	1	9191	9191		34.173	1.3601	1	840570	+		14912	26344	10285	10294	17166	17166					0.06513307754380548
HTASTTTE	8	Unmodified	_HTASTTTE_					0	0	0			REV__ENSG00000153822|ENST00000392671|KCNJ16	REV__ENSG00000153822|ENST00000392671|KCNJ16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.2187805175781	2	424.193239	846.371926	-1.8674	-0.00079214	1.4437	0.0006124	-0.42372	-0.00017974	424.19273508072996	101.9	0.25735	102.04	101.89	102.14	0.13569					7	5	2	0	0	0	0.4196	1	10633	10633		19.36	9.8894	1	29305	+		14913	20359	10286	10295	17167	17167					-0.05740534683991427
HTATLVIPVSL	11	Unmodified	_HTATLVIPVSL_					0	0	0			REV__ENSG00000138801|ENST00000265174|PAPSS1	REV__ENSG00000138801|ENST00000265174|PAPSS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8431396484375	2	575.845156	1149.67576	-1.6501	-0.00095021	-2.5974	-0.0014957	-4.2475	-0.0024459	575.8434791868526	90.193	1.8473	90.663	90.18	92.028	0.47068					146	46	4	0	0	0	0.69995	1	10848	10848		31.53	2.3598	1	1810000	+		14914	19509	10287	10296	17168	17168					0.10690847091291289
HTAVLARPRV	10	Unmodified	_HTAVLARPRV_					0	0	0			REV__chr13:43055543-43068930|15|37.13|0.22|7.43|+|0|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|12	REV__chr13:43055543-43068930|15|37.13|0.22|7.43|+|0|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8419799804688	2	560.340907	1118.66726	-1.4185	-0.00079484	0.46581	0.00026101	-0.95269	-0.00053383	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.8651	1	12751	12751		25.574	0	1	4071000	+		14915	15573	10288	10297	17169	17169					0.11267337965318802
HTCLIAVL	8	Unmodified	_HTCLIAVL_					0	0	0			REV__ENST00000483797.1_1_2:219204822-219205510:+|nuORF	REV__ENST00000483797.1_1_2:219204822-219205510:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25164794921875	2	435.249306	868.484059	1.6099	0.00070073	2.9528	0.0012852	4.5628	0.001986	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.89457	1	8061	8061		37.028	5.0736	1	3370400	+		14916	18749	10289	10298	17170	17170					0.04455647859299461
HTCLMMDM	8	Unmodified	_HTCLMMDM_					0	0	0		ENSG00000143624|ENST00000318967|INTS3;nc|ENSG00000143624|Q68E01|INTS3;nc|ENSG00000143624|Q68E01-4|INTS3;nc|ENSG00000143624|Q68E01-3|INTS3	ENSG00000143624|ENST00000318967|INTS3	ENSG00000143624|ENST00000318967|INTS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.1872253417969	2	491.186677	980.3588	-0.69565	-0.00034169	-1.616	-0.00079375	-2.3116	-0.0011354	491.1857028871769	64.603	1.5673	64.729	63.577	65.144	0.12545					102	62	2	0	0	0	0.84341	1	5689	5689		24.203	1.1603	1	139370			14917	4652	10290	10299	17171	17171					-0.13216471655243822
HTDGDHGNK	9	Unmodified	_HTDGDHGNK_					0	0	0			REV__ENST00000592414.1_1_19:3053819-3054095:-|nuORF	REV__ENST00000592414.1_1_19:3053819-3054095:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.71343994140625	2	490.712662	979.410771	1.0119	0.00049656	0.55065	0.00027021	1.5626	0.00076678	490.71308582341277	95.838	1.6901	96.258	95.585	97.275	0.42051					139	40	6	0	0	0	0.69624	1	11448	11448		40.778	0.20554	1	5952200	+		14918	17493	10291	10300	17172	17172					-0.07975809329604999
HTDLPSPLK	9	Unmodified	_HTDLPSPLK_					0	0	0		nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	nc|ENSG00000211899|P01871-1|IGHM	nc|ENSG00000211899|P01871-1|IGHM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.2798767089844	2	504.279649	1006.54475	1.0347	0.00052178	-1.2297	-0.00062013	-0.19504	-9.8353E-05	504.278915597717	37.489	1.0285	37.974	37.408	38.437	0.48581					59	25	3	0	0	0	0.14236	1	3039	3039		85.161	21.855	1	817680			14919	15242	10292	10301	17173	17173					0.0417345644324314
HTDLPSPLK	9	Unmodified	_HTDLPSPLK_					0	0	0		nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	nc|ENSG00000211899|P01871-1|IGHM	nc|ENSG00000211899|P01871-1|IGHM	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	504.279649	1006.54475	-0.033077	-1.668E-05	-0.072871	-3.6747E-05	-0.10595	-5.3427E-05	504.2794729909335	37.611	1.424	37.924	37.165	38.589	0.31312	-0.025199	0.00055418	NaN	85.161	78	35	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	938020			14920	15242	10292	10301							0.0417345644324314
HTDTTHPPP	9	Unmodified	_HTDTTHPPP_					0	0	0			REV__ENST00000264560.11_1_19:746795-747209:+|nuORF	REV__ENST00000264560.11_1_19:746795-747209:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29058837890625	2	501.735606	1001.45666	0.16746	8.4021E-05	-2.6102	-0.0013097	-2.4428	-0.0012256	501.73389009542706	84.38	0.52107	84.827	84.674	85.196	0.44736					19	12	2	0	0	0	0.20789	1	9847	9847		31.955	0	1	142100	+		14921	24471	10293	10302	17174	17174					-0.044011641473844065
HTEGILSK	8	Unmodified	_HTEGILSK_					0	0	0		ENST00000566590.5_1_16:8807641-8875284:+|nuORF	ENST00000566590.5_1_16:8807641-8875284:+|nuORF	ENST00000566590.5_1_16:8807641-8875284:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.74468994140625	2	442.745442	883.476331	-1.3973	-0.00061863	0.07774	3.4419E-05	-1.3195	-0.00058421	442.74530501109706	89.198	0.64397	89.405	89.043	89.687	0.20731					39	14	3	0	0	0	0.86677	1	8912	8912		27.882	1.0861	1	1011400			14922	13938	10294	10303	17175	17175					0.029932118633723803
HTEILKLFPQA	11	Unmodified	_HTEILKLFPQA_					0	0	0		nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10;ENST00000519732.5_1_17:67144970-67171813:-|nuORF;ENST00000522406.5_1_17:67144970-67178294:-|nuORF;ENST00000451020.6_1_4:419554-419923:-|nuORF;ENST00000518929.5_1_17:67144970-67149609:-|nuORF;ENSG00000154262|ENST00000284425|ABCA6	nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.8726196289062	2	648.869163	1295.72377	-0.0025716	-1.6686E-06	4.319	0.0028025	4.3164	0.0028008	648.8719439244529	99.494	2.1461	99.535	98.831	100.98	0.041107					134	49	3	0	0	0	0.66929	1	10644	10644		36.447	2.5251	1	250130			14923	5268;5269	10295	10304	17176	17176					0.08773921011334096
HTEILKLFPQA	11	Unmodified	_HTEILKLFPQA_					0	0	0		nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10;ENST00000519732.5_1_17:67144970-67171813:-|nuORF;ENST00000522406.5_1_17:67144970-67178294:-|nuORF;ENST00000451020.6_1_4:419554-419923:-|nuORF;ENST00000518929.5_1_17:67144970-67149609:-|nuORF;ENSG00000154262|ENST00000284425|ABCA6	nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.8740844726562	2	648.869163	1295.72377	2.3415	0.0015193	2.0631	0.0013387	4.4046	0.002858	648.8704740715605	99.639	2.1468	99.585	98.646	100.79	-0.053734					125	49	3	0	0	0	0.53361	1	10831	10831		49.536	6.6718	1	323740			14924	5268;5269	10295	10304	17177	17177					0.08773921011334096
HTEILKLFPQA	11	Unmodified	_HTEILKLFPQA_					0	0	0		nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10;ENST00000519732.5_1_17:67144970-67171813:-|nuORF;ENST00000522406.5_1_17:67144970-67178294:-|nuORF;ENST00000451020.6_1_4:419554-419923:-|nuORF;ENST00000518929.5_1_17:67144970-67149609:-|nuORF;ENSG00000154262|ENST00000284425|ABCA6	nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.8715209960938	2	648.869163	1295.72377	1.6012	0.0010389	2.3515	0.0015258	3.9527	0.0025648	648.8707405027678	99.281	2.2066	99.504	98.61	100.82	0.22262					133	51	3	0	0	0	0.53361	2	10380	10380;10392		49.536	14.384	1	269640			14925	5268;5269	10295	10304	17178;17179	17178					0.08773921011334096
HTEILKLFPQA	11	Unmodified	_HTEILKLFPQA_					0	0	0		nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10;ENST00000519732.5_1_17:67144970-67171813:-|nuORF;ENST00000522406.5_1_17:67144970-67178294:-|nuORF;ENST00000451020.6_1_4:419554-419923:-|nuORF;ENST00000518929.5_1_17:67144970-67149609:-|nuORF;ENSG00000154262|ENST00000284425|ABCA6	nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.8722534179688	2	648.869163	1295.72377	0.93377	0.00060589	2.7296	0.0017712	3.6634	0.0023771	648.8712589757642	99.284	2.1869	99.441	98.679	100.87	0.15659					107	50	3	0	0	0	0.53361	1	10391	10391		49.536	7.1399	1	221690			14926	5268;5269	10295	10304	17180	17180					0.08773921011334096
HTELKEKLRSI	11	Unmodified	_HTELKEKLRSI_					0	0	0		ENST00000515119.5_1_4:3517776-3534065:-|nuORF;ENST00000296325.9_1_4:3514703-3533784:-|nuORF;ENSG00000163956|ENST00000650182|LRPAP1	ENST00000515119.5_1_4:3517776-3534065:-|nuORF	ENST00000515119.5_1_4:3517776-3534065:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.93255615234375	3	451.933143	1352.7776	-1.2099	-0.00054677	0.20074	9.0723E-05	-1.0091	-0.00045605	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.70278	1	10509	10509		31.068	0.929	1	1176100			14927	5892	10296	10305	17181	17181					0.1153209344302013
HTEQHRTL	8	Unmodified	_HTEQHRTL_					0	0	0			REV__ENSG00000102870|ENST00000262525|ZNF629	REV__ENSG00000102870|ENST00000262525|ZNF629	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.82000732421875	2	511.262322	1020.51009	-0.36459	-0.0001864	2.5484	0.0013029	2.1838	0.0011165	511.2635423527176	83.047	0.60555	83.202	82.964	83.57	0.15474					21	13	2	0	0	0	0.4196	1	8043	8043		16.473	0	1	79881	+		14928	17364	10297	10306	17182	17182					0.0006563335514329083
HTETFSSAI	9	Unmodified	_HTETFSSAI_					0	0	0			REV__nc|ENSG00000148848|O43184-3|ADAM12	REV__nc|ENSG00000148848|O43184-3|ADAM12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.7382507324219	2	496.737814	991.461075	0.18271	9.076E-05	0.0057798	2.871E-06	0.18849	9.3631E-05	496.7375174258732	59.457	0.7662	59.425	59.111	59.877	-0.031727					40	18	3	0	0	0	0.31972	1	5555	5555		63.306	10.37	1	408790	+		14929	20143	10298	10307	17183	17183					-0.03499699724477523
HTETGKVL	8	Unmodified	_HTETGKVL_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.7445373535156	2	442.745442	883.476331	-0.15287	-6.7681E-05	-1.1117	-0.00049222	-1.2646	-0.0005599	442.7447912211249	89.714	0.69885	89.782	89.384	90.083	0.068703					38	15	3	0	0	0	0.86791	1	9186	9186		28.254	2.8041	1	674190			14930	1442	10299	10308	17184	17184					0.02993211863383749
HTETKTITY	9	Unmodified	_HTETKTITY_					0	0	0		nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-2|EPB41	nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;ENSG00000159023|ENST00000343067|EPB41	ENSG00000159023|ENST00000343067|EPB41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	547.2798461914062	2	547.279846	1092.54514	0.1543	8.4446E-05	-0.15148	-8.2901E-05	0.0028218	1.5443E-06	547.2795816099393	26.806	0.80088	26.847	26.577	27.378	0.040834					51	26	3	0	0	0	0.24527	2	1170	1163;1170		69.628	27.231	1	154920			14931	5507;1484	10300	10309	17185;17186	17186					0.002568313724395921
HTETKTITY	9	Unmodified	_HTETKTITY_					0	0	0		nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-2|EPB41	nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;ENSG00000159023|ENST00000343067|EPB41	ENSG00000159023|ENST00000343067|EPB41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.279052734375	2	547.279846	1092.54514	0.42612	0.0002332	-0.67232	-0.00036795	-0.2462	-0.00013474	547.2793249693905	26.828	0.98989	26.79	26.483	27.473	-0.038525					50	23	3	0	0	0	0.69624	3	1241	1241;1255;1274		40.778	10.937	1	181010			14932	5507;1484	10300	10309	17187;17188;17189	17187					0.002568313724395921
HTETKTITY	9	Unmodified	_HTETKTITY_					0	0	0		nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;ENSG00000082397|ENST00000341928|EPB41L3;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-2|EPB41	nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;ENSG00000159023|ENST00000343067|EPB41	ENSG00000159023|ENST00000343067|EPB41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.2797241210938	2	547.279846	1092.54514	0.86735	0.00047468	-1.0555	-0.00057766	-0.18815	-0.00010297	547.2790276989027	27.014	1.0456	26.987	26.557	27.602	-0.027706					52	25	3	0	0	0	0.41566	3	1184	1184;1200;1206		56.721	14.247	1	173050			14933	5507;1484	10300	10309	17190;17191;17192	17190					0.002568313724395921
HTFHGNFFV	9	Unmodified	_HTFHGNFFV_					0	0	0		ENSG00000113615|ENST00000398844|SEC24A;nc|ENSG00000138802|O95487-2|SEC24B;ENSG00000138802|ENST00000265175|SEC24B;nc|ENSG00000138802|O95487-3|SEC24B	ENSG00000113615|ENST00000398844|SEC24A;nc|ENSG00000138802|O95487-2|SEC24B	nc|ENSG00000138802|O95487-2|SEC24B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3324584960938	2	553.264333	1104.51411	1.0924	0.00060438	-2.1581	-0.001194	-1.0657	-0.00058964	553.2630617095682	96.537	0.86428	96.942	96.632	97.496	0.40498					31	20	2	0	0	0	0.20789	1	11629	11629		38.806	6.8513	1	207780			14934	2733;4337	10301	10310	17193	17193					-0.03396277151136928
HTFILAVL	8	Unmodified	_HTFILAVL_					0	0	0			REV__ENSG00000232382|ENST00000642057|OR5K1	REV__ENSG00000232382|ENST00000642057|OR5K1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2640075683594	2	457.278921	912.543289	-1.2428	-0.00056831	-4.0948	-0.0018725	-5.3376	-0.0024408	457.27718582812537	82.646	0.54539	82.646	82.308	82.853	0					14	12	2	0	0	0	0.4196	1	7691	7691		28.254	0	1	36471	+		14935	23765	10302	10311	17194	17194					0.08351867145142933
HTFILAVL	8	Unmodified	_HTFILAVL_					0	0	0			REV__ENSG00000232382|ENST00000642057|OR5K1	REV__ENSG00000232382|ENST00000642057|OR5K1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26409912109375	2	457.278921	912.543289	-0.13172	-6.0234E-05	-1.0175	-0.00046529	-1.1492	-0.00052553	457.27790335941523	81.874	0.42625	81.939	81.572	81.998	0.064384					14	9	2	0	0	0	0.4196	1	8075	8075		28.254	7.3073	1	51395	+		14936	23765	10302	10311	17195	17195					0.08351867145142933
HTFKGIPQ	8	Unmodified	_HTFKGIPQ_					0	0	0		ENST00000075120.11_1_12:8072599-8072824:-|nuORF	ENST00000075120.11_1_12:8072599-8072824:-|nuORF	ENST00000075120.11_1_12:8072599-8072824:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2536315917969	2	464.255977	926.497401	-1.1393	-0.00052891	-3.7181	-0.0017262	-4.8574	-0.0022551	464.2540387663155	87.229	0.60403	87.229	86.951	87.555	0					25	13	2	0	0	0	0.86677	1	8356	8356		27.882	2.4321	1	88739			14937	9075	10303	10312	17196	17196					0.031212219629082938
HTFKGIPQ	8	Unmodified	_HTFKGIPQ_					0	0	0		ENST00000075120.11_1_12:8072599-8072824:-|nuORF	ENST00000075120.11_1_12:8072599-8072824:-|nuORF	ENST00000075120.11_1_12:8072599-8072824:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	464.255977	926.497401	-0.14623	-6.7887E-05	-4.6409	-0.0021546	-4.7872	-0.0022225	464.2536894192985	86.881	0.49693	87.327	87.102	87.599	0.44628	-0.020456	-0.00085422	NaN	27.882	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110210			14938	9075	10303	10312							0.031212219629082938
HTFKGIPQ	8	Unmodified	_HTFKGIPQ_					0	0	0		ENST00000075120.11_1_12:8072599-8072824:-|nuORF	ENST00000075120.11_1_12:8072599-8072824:-|nuORF	ENST00000075120.11_1_12:8072599-8072824:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	464.255977	926.497401	-0.96107	-0.00044618	-3.4577	-0.0016053	-4.4188	-0.0020514	464.2542793416831	87.033	0.8622	87.487	86.815	87.677	0.4543	0.13947	0.00024441	NaN	27.882	28	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113220			14939	9075	10303	10312							0.031212219629082938
HTFKGLKL	8	Unmodified	_HTFKGLKL_					0	0	0			REV__ENSG00000198838|ENST00000634891|RYR3	REV__ENSG00000198838|ENST00000634891|RYR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2856750488281	2	472.28982	942.565087	0.77592	0.00036646	-3.9935	-0.0018861	-3.2175	-0.0015196	472.2881320540842	102.18	1.2251	102.32	101.72	102.94	0.13523					57	29	3	0	0	0	0.8347	1	10784	10784		23.042	1.3402	1	404720	+		14940	23393	10304	10313	17197	17197					0.09150671893701201
HTFQKLYKL	9	Unmodified	_HTFQKLYKL_					0	0	0			REV__ENST00000240922.7_1_3:113437946-113438081:-|nuORF	REV__ENST00000240922.7_1_3:113437946-113438081:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3427734375	2	589.340041	1176.66553	0.82336	0.00048524	4.113	0.002424	4.9364	0.0029092	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.76255	1	11102	11102		35.618	9.5549	1	9460500	+		14941	24226	10305	10314	17198	17198					0.08426284156712427
HTFRAVVI	8	Unmodified	_HTFRAVVI_					0	0	0		ENST00000258781.10_1_7:45115652-45115988:+|nuORF	ENST00000258781.10_1_7:45115652-45115988:+|nuORF	ENST00000258781.10_1_7:45115652-45115988:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.7787170410156	2	471.779619	941.544686	0.57127	0.00026951	-1.9472	-0.00091864	-1.3759	-0.00064913	471.7785193324983	82.773	0.8857	82.707	82.281	83.166	-0.066185					44	20	3	0	0	0	0.91472	1	8417	8417		44.117	8.4985	1	313290			14942	9374	10306	10315	17199	17199					0.07157501233893981
HTFRAVVI	8	Unmodified	_HTFRAVVI_					0	0	0		ENST00000258781.10_1_7:45115652-45115988:+|nuORF	ENST00000258781.10_1_7:45115652-45115988:+|nuORF	ENST00000258781.10_1_7:45115652-45115988:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.77886962890625	2	471.779619	941.544686	-0.3072	-0.00014493	-1.3311	-0.000628	-1.6383	-0.00077293	471.7788353055033	81.895	1.368	82.322	81.921	83.289	0.42646					68	33	4	0	0	0	0.83456	1	9471	9471		60.972	0.67798	1	2126100			14943	9374	10306	10315	17200	17200					0.07157501233893981
HTFSEVWIL	9	Unmodified	_HTFSEVWIL_					0	0	0		ENST00000535902.5_2_12:12483699-12483756:-|nuORF	ENST00000535902.5_2_12:12483699-12483756:-|nuORF	ENST00000535902.5_2_12:12483699-12483756:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	566.2969970703125	2	566.295299	1130.57605	-0.18097	-0.00010248	2.9054	0.0016453	2.7244	0.0015428	566.2968558447203	63.069	0.41225	63.098	62.922	63.334	0.02813					36	19	3	0	0	0	0.77546	1	5908	5908		31.955	5.1588	1	87767			14944	13431	10307	10316	17201	17201					0.015980294773271453
HTFVPILGIH	10	Unmodified	_HTFVPILGIH_					0	0	0		ENSG00000183454|ENST00000330684|GRIN2A;nc|ENSG00000183454|Q12879-2|GRIN2A;ENST00000566665.1_1_16:10273773-10274277:-|nuORF	ENSG00000183454|ENST00000330684|GRIN2A	ENSG00000183454|ENST00000330684|GRIN2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3298950195312	2	567.326934	1132.63931	1.497	0.00084932	3.499	0.0019851	4.9961	0.0028344	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.86452	1	9563	9563		30.504	1.3541	1	15259000			14945	7533	10308	10317	17202	17202					0.07830014985233902
HTGAALFKL	9	Unmodified	_HTGAALFKL_					0	0	0			REV__nc|ENSG00000288920|A0A8I5KQE6|RPSA2	REV__nc|ENSG00000288920|A0A8I5KQE6|RPSA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774658203125	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.78536	1	8206	8206		29.15	1.2673	1	7438100	+		14946	21452	10309	10318	17203	17203					0.0643408151404401
HTGFKPPN	8	Unmodified	_HTGFKPPN_					0	0	0			REV__ENSG00000131023|ENST00000543571|LATS1	REV__ENSG00000131023|ENST00000543571|LATS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	449.2354736328125	2	449.232502	896.450451	-1.2481	-0.0005607	-2.9689	-0.0013337	-4.217	-0.0018944	449.23112787491493	83.63	3.2349	83.63	82.037	85.271	0					120	78	2	0	0	0	0.8621	1	7836	7836		26.693	1.2427	1	126580	+		14947	18930	10310	10319	17204	17204					-0.0019163758825015975
HTGFSKAKL	9	Unmodified	_HTGFSKAKL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7799987792969	2	494.782359	987.550165	-0.85772	-0.00042438	-3.1278	-0.0015476	-3.9855	-0.001972	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.76255	1	8718	8718		35.618	5.1146	1	737700			14948	4108	10311	10320	17205	17205					0.05589180025708629
HTGFSKAKL	9	Unmodified	_HTGFSKAKL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7804260253906	2	494.782359	987.550165	-0.78615	-0.00038897	-3.2604	-0.0016132	-4.0465	-0.0020021	494.78060020608814	86.18	3.7368	86.627	85.355	89.092	0.44736					160	91	3	0	0	0	0.78058	1	10208	10208		30.504	0.6621	1	656610			14949	4108	10311	10320	17206	17206					0.05589180025708629
HTGGEPLRI	9	Unmodified	_HTGGEPLRI_					0	0	0		ENST00000527981.1_1_14:59950407-59951094:-|nuORF;ENSG00000126790|ENST00000247194|L3HYPDH	ENST00000527981.1_1_14:59950407-59951094:-|nuORF	ENST00000527981.1_1_14:59950407-59951094:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	490.2674865722656	2	490.269616	978.524678	-0.67207	-0.0003295	-1.9797	-0.00097057	-2.6517	-0.0013001	490.26866249477763	83.997	2.9917	84.163	83.319	86.311	0.1651					132	69	2	0	0	0	0.77244	1	8216	8216		32.812	0.85756	1	268130			14950	3470	10312	10321	17207	17207					0.03455705503279205
HTGGGHPRGR	10	Unmodified	_HTGGGHPRGR_					0	0	0		ENST00000603055.1_1_16:3614272-3617284:-|nuORF	ENST00000603055.1_1_16:3614272-3617284:-|nuORF	ENST00000603055.1_1_16:3614272-3617284:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.31396484375	2	516.26573	1030.51691	0.80289	0.00041451	4.0435	0.0020875	4.8464	0.002502	516.2681885876522	99.176	0.4953	99.333	98.859	99.354	0.15659					18	11	2	0	0	0	0.37624	1	10291	10291		49.442	7.0454	1	279930			14951	14420	10313	10322	17208	17208					0.002869910263825659
HTGGGHPRGR	10	Unmodified	_HTGGGHPRGR_					0	0	0		ENST00000603055.1_1_16:3614272-3617284:-|nuORF	ENST00000603055.1_1_16:3614272-3617284:-|nuORF	ENST00000603055.1_1_16:3614272-3617284:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3138427734375	2	516.26573	1030.51691	-1.562	-0.00080643	-2.5844	-0.0013342	-4.1464	-0.0021406	516.2645515794399	99.073	0.41543	99.258	98.943	99.358	0.18582					15	9	2	0	0	0	0.37624	1	10201	10201		39.253	0	1	156840			14952	14420	10313	10322	17209	17209					0.002869910263825659
HTGGRGKL	8	Unmodified	_HTGGRGKL_					0	0	0		ENST00000597953.1_1_3:142719968-142720172:-|nuORF	ENST00000597953.1_1_3:142719968-142720172:-|nuORF	ENST00000597953.1_1_3:142719968-142720172:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.23760986328125	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.80706	1	7196	7196		19.36	1.0356	1	1747900			14953	14365	10314	10323	17210	17210					0.04243184505912723
HTGLGLLAWPL	11	Unmodified	_HTGLGLLAWPL_					0	0	0		ENST00000176763.9_1_5:171470934-171471408:-|nuORF	ENST00000176763.9_1_5:171470934-171471408:-|nuORF	ENST00000176763.9_1_5:171470934-171471408:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3425903320312	2	589.340041	1176.66553	2.472	0.0014569	2.3274	0.0013717	4.7995	0.0028285	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.72228	2	9964	9964;10000		27.882	4.3595	1	16740000			14954	9086	10315	10324	17211;17212	17211					0.0842628415668969
HTGLGLLAWPL	11	Unmodified	_HTGLGLLAWPL_					0	0	0		ENST00000176763.9_1_5:171470934-171471408:-|nuORF	ENST00000176763.9_1_5:171470934-171471408:-|nuORF	ENST00000176763.9_1_5:171470934-171471408:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427124023438	2	589.340041	1176.66553	0.81285	0.00047905	3.7357	0.0022016	4.5485	0.0026806	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.67493	1	9284	9284		35.618	4.0885	1	6450100			14955	9086	10315	10324	17213	17213					0.0842628415668969
HTGLGLLAWPL	11	Unmodified	_HTGLGLLAWPL_					0	0	0		ENST00000176763.9_1_5:171470934-171471408:-|nuORF	ENST00000176763.9_1_5:171470934-171471408:-|nuORF	ENST00000176763.9_1_5:171470934-171471408:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3424072265625	2	589.340041	1176.66553	0.83312	0.00049099	4.0027	0.002359	4.8358	0.00285	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.75041	1	9958	9958		21.96	1.013	1	20363000			14956	9086	10315	10324	17214	17214					0.0842628415668969
HTGLWTGGAKA	11	Unmodified	_HTGLWTGGAKA_					0	0	0			REV__chr19:6375616-6375702|41|31.05|0.14|7.81|-|2|PSPN,PSPN|1	REV__chr19:6375616-6375702|41|31.05|0.14|7.81|-|2|PSPN,PSPN|1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.7865600585938	2	549.788173	1097.56179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.38	1	110.38	109.88	110.88	0								0	0	0	0.56276	1	11466	11466		22.58	3.2197	1		+		14957	15728	10316	10325	17215	17215					0.016913770490418756
HTGNATALLAV	11	Unmodified	_HTGNATALLAV_					0	0	0			REV__nc|ENSG00000065029|P36508-2|ZNF76	REV__nc|ENSG00000065029|P36508-2|ZNF76	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	534.2941284179688	2	534.29583	1066.57711	0.72795	0.00038894	-2.9777	-0.001591	-2.2498	-0.001202	534.2941828355348	88.565	3.2008	88.715	87.555	90.756	0.15054					137	75	2	0	0	0	0.67778	1	8879	8879		35.152	4.6484	1	511660	+		14958	16490	10317	10326	17216	17216					0.04648243846236255
HTGSRVIGG	9	Unmodified	_HTGSRVIGG_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024146	REV__CON__ENSEMBL:ENSBTAP00000024146	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2408142089844	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.64922	3	7682	7470;7682;7773		44.117	6.9577	1	716910	+	+	14959	15963	10318	10327	17217;17218;17219	17218					0.02122863297722688
HTGSRVIGG	9	Unmodified	_HTGSRVIGG_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024146	REV__CON__ENSEMBL:ENSBTAP00000024146	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.240966796875	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.62081	5	8179	7977;8045;8058;8155;8179		45.952	7.1458	1	1068200	+	+	14960	15963	10318	10327	17220;17221;17222;17223;17224	17224					0.02122863297722688
HTGSRVIGG	9	Unmodified	_HTGSRVIGG_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024146	REV__CON__ENSEMBL:ENSBTAP00000024146	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.24078369140625	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.76255	1	8139	8139		35.618	10.044	1	1238700	+	+	14961	15963	10318	10327	17225	17225					0.02122863297722688
HTGSRVIGG	9	Unmodified	_HTGSRVIGG_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024146	REV__CON__ENSEMBL:ENSBTAP00000024146	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.24066162109375	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.64922	3	7899	7400;7840;7899		44.117	5.3107	1	1219900	+	+	14962	15963	10318	10327	17226;17227;17228	17228					0.02122863297722688
HTGSRVIGG	9	Unmodified	_HTGSRVIGG_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024146	REV__CON__ENSEMBL:ENSBTAP00000024146	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24090576171875	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.78058	1	7865	7865		30.504	30.504	1	1094000	+	+	14963	15963	10318	10327	17229	17229					0.02122863297722688
HTGSRVIGG	9	Unmodified	_HTGSRVIGG_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024146	REV__CON__ENSEMBL:ENSBTAP00000024146	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2407531738281	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.72402	2	7663	7663;7707		38.806	6.8513	1	968500	+	+	14964	15963	10318	10327	17230;17231	17230					0.02122863297722688
HTGTKPYAC	9	Unmodified	_HTGTKPYAC_					0	0	0		ENSG00000254004|ENST00000523638|ZNF260	ENSG00000254004|ENST00000523638|ZNF260	ENSG00000254004|ENST00000523638|ZNF260	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.2305603027344	2	489.229102	976.443651	-0.28331	-0.0001386	4.1329	0.002022	3.8496	0.0018834	489.2309115743778	18.422	0.30752	18.346	18.227	18.534	-0.07671					10	7	2	0	0	0	0.78536	1	312	312		29.15	0.89528	1	46502			14965	8870	10319	10328	17232	17232					-0.0455131853112789
HTGTKPYAC	9	Unmodified	_HTGTKPYAC_					0	0	0		ENSG00000254004|ENST00000523638|ZNF260	ENSG00000254004|ENST00000523638|ZNF260	ENSG00000254004|ENST00000523638|ZNF260	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	489.229102	976.443651	1.0153	0.00049671	2.9451	0.0014408	3.9603	0.0019375	489.2304956710529	17.961	0.32521	18.036	17.867	18.192	0.075443	-0.19874	-0.0012035	NaN	29.15	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29944			14966	8870	10319	10328							-0.0455131853112789
HTGTKPYAC	9	Unmodified	_HTGTKPYAC_					0	0	0		ENSG00000254004|ENST00000523638|ZNF260	ENSG00000254004|ENST00000523638|ZNF260	ENSG00000254004|ENST00000523638|ZNF260	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	489.229102	976.443651	-1.3022	-0.00063706	5.198	0.002543	3.8958	0.001906	489.2315811632106	18.402	0.28946	18.323	18.182	18.471	-0.078943	0.088014	0.001001	NaN	29.15	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33287			14967	8870	10319	10328							-0.0455131853112789
HTGVSLWK	8	Unmodified	_HTGVSLWK_					0	0	0			REV__ENSG00000188107|ENST00000503581|EYS	REV__ENSG00000188107|ENST00000503581|EYS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2530212402344	2	464.255977	926.497401	-1.1813	-0.00054845	-2.9805	-0.0013837	-4.1619	-0.0019322	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.88601	1	8177	8177		34.173	7.4796	1	946850	+		14968	22978	10320	10329	17233	17233					0.03121221962896925
HTGYSAVL	8	Unmodified	_HTGYSAVL_					0	0	0		ENST00000361368.6_1_7:98627902-98627968:-|nuORF	ENST00000361368.6_1_7:98627902-98627968:-|nuORF	ENST00000361368.6_1_7:98627902-98627968:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.21844482421875	2	424.21906	846.423567	2.8621	0.0012142	-4.1607	-0.001765	-1.2985	-0.00055086	424.2172299005605	101.48	1.8959	101.53	100.85	102.75	0.044823					89	45	3	0	0	0	0.86288	1	10955	10955		26.796	1.3459	1	2047000			14969	10473	10321	10330	17234	17234					-0.005787461994145815
HTHGHWISE	9	Unmodified	_HTHGHWISE_					0	0	0			REV__ENSG00000112473|ENST00000374677|SLC39A7	REV__ENSG00000112473|ENST00000374677|SLC39A7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3056640625	2	552.254497	1102.49444	2.3368	0.0012905	-3.8028	-0.0021001	-1.466	-0.00080962	552.2522571812585	93.182	0.86452	93.12	92.805	93.67	-0.061432					31	20	2	0	0	0	0.20789	1	9848	9848		38.806	0	1	97182	+		14970	17946	10322	10331	17235	17235					-0.052706531619151065
HTHHITSA	8	Unmodified	_HTHHITSA_					0	0	0		ENST00000452157.5_1_5:56218957-56234137:-|nuORF;nc|ENSG00000155545|Q7Z3K6-4|MIER3;nc|ENSG00000155545|Q7Z3K6-3|MIER3;ENSG00000155545|ENST00000381199|MIER3;nc|ENSG00000155545|Q7Z3K6-2|MIER3	ENST00000452157.5_1_5:56218957-56234137:-|nuORF	ENST00000452157.5_1_5:56218957-56234137:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.2254333496094	2	452.225208	902.435863	0.99256	0.00044886	-0.73547	-0.0003326	0.25709	0.00011626	452.2248234939651	16.097	0.17762	16.013	15.92	16.098	-0.083363					12	7	2	0	0	0	0.92973	1	108	108		50.025	5.9077	1	95583			14971	5328	10323	10332	17236	17236					-0.019257097363833964
HTHHITSA	8	Unmodified	_HTHHITSA_					0	0	0		ENST00000452157.5_1_5:56218957-56234137:-|nuORF;nc|ENSG00000155545|Q7Z3K6-4|MIER3;nc|ENSG00000155545|Q7Z3K6-3|MIER3;ENSG00000155545|ENST00000381199|MIER3;nc|ENSG00000155545|Q7Z3K6-2|MIER3	ENST00000452157.5_1_5:56218957-56234137:-|nuORF	ENST00000452157.5_1_5:56218957-56234137:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	452.225208	902.435863	-0.36436	-0.00016477	0.64867	0.00029335	0.28432	0.00012857	452.22533014937545	16.165	0.29013	16.085	15.98	16.27	-0.080017	0.018264	0.00081023	NaN	50.025	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110110			14972	5328	10323	10332							-0.019257097363833964
HTHHITSA	8	Unmodified	_HTHHITSA_					0	0	0		ENST00000452157.5_1_5:56218957-56234137:-|nuORF;nc|ENSG00000155545|Q7Z3K6-4|MIER3;nc|ENSG00000155545|Q7Z3K6-3|MIER3;ENSG00000155545|ENST00000381199|MIER3;nc|ENSG00000155545|Q7Z3K6-2|MIER3	ENST00000452157.5_1_5:56218957-56234137:-|nuORF	ENST00000452157.5_1_5:56218957-56234137:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	452.225208	902.435863	-1.3539	-0.00061225	1.5387	0.00069585	0.18485	8.3595E-05	452.2258153288245	15.988	0.21545	16.036	15.926	16.141	0.047804	-0.031358	0.0016152	NaN	50.025	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85794			14973	5328	10323	10332							-0.019257097363833964
HTHHITSA	8	Unmodified	_HTHHITSA_					0	0	0		ENST00000452157.5_1_5:56218957-56234137:-|nuORF;nc|ENSG00000155545|Q7Z3K6-4|MIER3;nc|ENSG00000155545|Q7Z3K6-3|MIER3;ENSG00000155545|ENST00000381199|MIER3;nc|ENSG00000155545|Q7Z3K6-2|MIER3	ENST00000452157.5_1_5:56218957-56234137:-|nuORF	ENST00000452157.5_1_5:56218957-56234137:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	452.225208	902.435863	0.034531	1.5616E-05	0.24323	0.00010999	0.27776	0.00012561	452.2251897357387	16.078	0.19672	16.137	16.035	16.232	0.059269	0.06994	0.00044353	NaN	50.025	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98376			14974	5328	10323	10332							-0.019257097363833964
HTHHITSA	8	Unmodified	_HTHHITSA_					0	0	0		ENST00000452157.5_1_5:56218957-56234137:-|nuORF;nc|ENSG00000155545|Q7Z3K6-4|MIER3;nc|ENSG00000155545|Q7Z3K6-3|MIER3;ENSG00000155545|ENST00000381199|MIER3;nc|ENSG00000155545|Q7Z3K6-2|MIER3	ENST00000452157.5_1_5:56218957-56234137:-|nuORF	ENST00000452157.5_1_5:56218957-56234137:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	452.225208	902.435863	0.61481	0.00027803	-0.83886	-0.00037936	-0.22405	-0.00010132	452.22461625572	16.088	0.15921	16.064	15.981	16.14	-0.024035	-0.0032501	-0.00053517	NaN	50.025	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74543			14975	5328	10323	10332							-0.019257097363833964
HTHLLALIHL	10	Unmodified	_HTHLLALIHL_					0	0	0			REV__nc|ENSG00000145284|Q86SK9-2|SCD5	REV__nc|ENSG00000145284|Q86SK9-2|SCD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.3568725585938	2	584.353483	1166.69241	2.1397	0.0012504	2.1453	0.0012536	4.285	0.002504	584.3547865712267	92.649	3.0655	92.585	91.199	94.264	-0.064148					195	72	3	0	0	0	0.86201	1	9788	9788		24.203	8.5609	1	743110	+		14976	29911	10324	10333	17237	17237					0.11573392767900259
HTHLLLRPF	9	Unmodified	_HTHLLLRPF_					0	0	0			REV__ENSG00000134398|ENST00000256797|ERN2	REV__ENSG00000134398|ENST00000256797|ERN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3276977539062	2	567.33255	1132.65055	-1.2006	-0.00068114	-3.7107	-0.0021052	-4.9113	-0.0027863	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.78058	1	10045	10045		30.504	1.3336	1	15673000	+		14977	19140	10325	10334	17238	17238					0.08952837079368692
HTHTNIGKV	9	Unmodified	_HTHTNIGKV_					0	0	0		ENST00000371146.5_1_1:62916657-62916786:+|nuORF	ENST00000371146.5_1_1:62916657-62916786:+|nuORF	ENST00000371146.5_1_1:62916657-62916786:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	504.3478698730469	2	503.775065	1005.53558	-0.88502	-0.00044585	-1.0741	-0.00054108	-1.9591	-0.00098693	503.77448887827853	37.612	0.39904	37.562	37.451	37.85	-0.050369					11	8	2	0	0	0	0.20789	1	2597	2597		25.574	3.6142	1	35703			14978	10660	10326	10335	17239	17239					0.03303107877582079
HTHVRRKMI	9	Unmodified	_HTHVRRKMI_					0	0	0			REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3424682617188	2	589.340384	1176.66621	2.472	0.0014569	1.7459	0.0010289	4.2179	0.0024858	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.76255	1	10096	10096		35.618	1.4457	1	16740000	+		14979	22929	10327	10336	17240	17240					0.08494800324774587
HTHVRRKMI	9	Unmodified	_HTHVRRKMI_					0	0	0			REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3429565429688	2	589.340384	1176.66621	0.83312	0.00049099	3.4212	0.0020162	4.2543	0.0025072	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.78983	1	9631	9631		27.882	3.3631	1	20363000	+		14980	22929	10327	10336	17241	17241					0.08494800324774587
HTIAWRLNN	9	Unmodified	_HTIAWRLNN_					0	0	0		L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|159|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|159|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|159|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.80615234375	2	562.801614	1123.58868	0.55565	0.00031272	-3.3171	-0.0018669	-2.7614	-0.0015541	562.7999757337752	58.191	0.45177	58.745	58.512	58.964	0.55323					23	10	3	0	0	0	0.20789	1	6068	6068		19.997	5.1319	1	218160			14981	14679	10328	10337	17242	17242					0.0318248566022703
HTILLQSIRQG	11	Unmodified	_HTILLQSIRQG_					0	0	0			REV__ENSG00000174145|ENST00000309447|NWD2	REV__ENSG00000174145|ENST00000309447|NWD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5816650390625	3	422.582333	1264.72517	-0.18543	-7.8358E-05	-0.58125	-0.00024563	-0.76668	-0.00032399	422.58203704906714	97.831	3.5899	97.888	96.517	100.11	0.056831					202	83	4	0	0	0	0.77061	1	10380	10380		11.455	0.89273	1	436660	+		14982	21975	10329	10338	17243	17243					0.1033955510006308
HTILTFRL	8	Unmodified	_HTILTFRL_					0	0	0		ENSG00000172199|ENST00000302270|OR8U1	ENSG00000172199|ENST00000302270|OR8U1	ENSG00000172199|ENST00000302270|OR8U1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.79864501953125	2	500.800552	999.58655	-0.20548	-0.00010291	-3.0807	-0.0015428	-3.2862	-0.0016457	500.79776973299846	94.355	2.1278	94.402	93.492	95.62	0.046173					87	50	4	0	0	0	0.88944	1	9950	9950		57.811	17.239	1	522090			14983	6751	10330	10339	17244	17244					0.08674056922438922
HTIPIFRK	8	Unmodified	_HTIPIFRK_					0	0	0			REV__ENST00000457484.6_1_7:1609854-1614359:+|nuORF	REV__ENST00000457484.6_1_7:1609854-1614359:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.30926513671875	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.106	1	43.106	42.606	43.606	0								0	0	0	0.30579	1	3035	3035		16.473	0.83134	1		+		14984	26969	10331	10340	17245	17245					0.09765763159327889
HTIQVILKSKS	11	Unmodified	_HTIQVILKSKS_					0	0	0		ENST00000529918.1_1_8:61178441-61193874:-|nuORF;ENSG00000178538|ENST00000317995|CA8	ENST00000529918.1_1_8:61178441-61193874:-|nuORF	ENST00000529918.1_1_8:61178441-61193874:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.386962890625	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.638	1	12872	12872		40.058	6.1365	1	19815000			14985	7211	10332	10341	17246	17246					0.1340560990265658
HTISAAFEAL	10	Unmodified	_HTISAAFEAL_					0	0	0		ENST00000463422.5_1_2:85981774-86000028:+|nuORF;ENSG00000168874|ENST00000306279|ATOH8;nc|ENSG00000168874|Q96SQ7-2|ATOH8	ENST00000463422.5_1_2:85981774-86000028:+|nuORF	ENST00000463422.5_1_2:85981774-86000028:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2784423828125	2	530.277106	1058.53966	0.45033	0.0002388	-1.9486	-0.0010333	-1.4983	-0.00079451	530.2753530192242	58.448	0.23106	58.558	58.395	58.627	0.11027					18	10	2	0	0	0	0.67608	1	4990	4990		45.952	3.5558	1	81943			14986	6445	10333	10342	17247	17247					0.012731525806202626
HTKEALGFI	9	Unmodified	_HTKEALGFI_					0	0	0		ENSG00000169679|ENST00000302759|BUB1;nc|ENSG00000169679|O43683-3|BUB1;nc|ENSG00000169679|O43683-2|BUB1	ENSG00000169679|ENST00000302759|BUB1	ENSG00000169679|ENST00000302759|BUB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2801818847656	2	508.282192	1014.54983	-0.88176	-0.00044818	-2.9285	-0.0014885	-3.8102	-0.0019367	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.71772	1	8625	8625		39.253	2.0937	1	1261800			14987	6515	10334	10343	17248	17248					0.04313760305853975
HTKEALGFI	9	Unmodified	_HTKEALGFI_					0	0	0		ENSG00000169679|ENST00000302759|BUB1;nc|ENSG00000169679|O43683-3|BUB1;nc|ENSG00000169679|O43683-2|BUB1	ENSG00000169679|ENST00000302759|BUB1	ENSG00000169679|ENST00000302759|BUB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.27996826171875	2	508.282192	1014.54983	-0.055639	-2.828E-05	-3.7761	-0.0019193	-3.8318	-0.0019476	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.67345	1	9017	9017		42.396	1.8235	1	1918800			14988	6515	10334	10343	17249	17249					0.04313760305853975
HTKEALGFI	9	Unmodified	_HTKEALGFI_					0	0	0		ENSG00000169679|ENST00000302759|BUB1;nc|ENSG00000169679|O43683-3|BUB1;nc|ENSG00000169679|O43683-2|BUB1	ENSG00000169679|ENST00000302759|BUB1	ENSG00000169679|ENST00000302759|BUB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.280029296875	2	508.282192	1014.54983	0.22565	0.0001147	-4.0704	-0.0020689	-3.8448	-0.0019542	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.41566	1	9187	9187		56.721	12.604	1	1820400			14989	6515	10334	10343	17250	17250					0.04313760305853975
HTKEALGFI	9	Unmodified	_HTKEALGFI_					0	0	0		ENSG00000169679|ENST00000302759|BUB1;nc|ENSG00000169679|O43683-3|BUB1;nc|ENSG00000169679|O43683-2|BUB1	ENSG00000169679|ENST00000302759|BUB1	ENSG00000169679|ENST00000302759|BUB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.2799072265625	2	508.282192	1014.54983	-0.39652	-0.00020155	-3.6656	-0.0018632	-4.0621	-0.0020647	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.76255	1	8796	8796		35.618	2.1027	1	2080300			14990	6515	10334	10343	17251	17251					0.04313760305853975
HTKEALGFI	9	Unmodified	_HTKEALGFI_					0	0	0		ENSG00000169679|ENST00000302759|BUB1;nc|ENSG00000169679|O43683-3|BUB1;nc|ENSG00000169679|O43683-2|BUB1	ENSG00000169679|ENST00000302759|BUB1	ENSG00000169679|ENST00000302759|BUB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2801208496094	2	508.282192	1014.54983	-0.38511	-0.00019575	-3.5589	-0.0018089	-3.944	-0.0020047	508.28029410514995	88.272	2.579	88.735	87.686	90.265	0.46312					198	63	4	0	0	0	0.67345	1	10331	10331		42.396	6.7778	1	2008000			14991	6515	10334	10343	17252	17252					0.04313760305853975
HTKEHRQLSK	10	Unmodified	_HTKEHRQLSK_					0	0	0			REV__ENSG00000198429|ENST00000429654|ZNF69	REV__ENSG00000198429|ENST00000429654|ZNF69	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.5716552734375	3	421.902065	1262.68437	0.10808	4.56E-05	1.4281	0.00060254	1.5362	0.00064814	421.9031296530112	31.371	0.099636	31.483	31.416	31.516	0.11198					5	4	2	0	0	0	0.37624	1	1429	1429		25.126	6.5949	1	39298	+		14992	23325	10335	10344	17253	17253					0.06353213780448641
HTKFIGAGHH	10	Unmodified	_HTKFIGAGHH_					0	0	0			REV__ENSG00000204361|ENST00000389586|NXPE2	REV__ENSG00000204361|ENST00000389586|NXPE2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.8114013671875	2	552.788507	1103.56246	-1.0755	-0.00059453	-0.49853	-0.00027558	-1.574	-0.00087011	552.7885420013055	28.373	0.52817	28.276	27.929	28.458	-0.096947					22	12	2	0	0	0	0.37624	1	1695	1695		37.812	23.674	1	54474	+		14993	23486	10336	10345	17254	17254					0.014822164887618783
HTKGAVPIG	9	Unmodified	_HTKGAVPIG_					0	0	0			REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25506591796875	2	440.255977	878.497401	-0.8618	-0.00037941	-0.60853	-0.00026791	-1.4703	-0.00064732	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.7932	1	6855	6855		21.96	2.8564	1	1365500	+		14994	22914	10337	10346	17255	17255					0.053292219629156534
HTKGLGRT	8	Unmodified	_HTKGLGRT_					0	0	0			REV__ENST00000512692.6_1_4:141206332-141290472:-|nuORF	REV__ENST00000512692.6_1_4:141206332-141290472:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2516784667969	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.89962	1	7727	7727		38.806	1.647	1	2494100	+		14995	27982	10338	10347	17256	17256					0.04839453677391248
HTKIAQFI	8	Unmodified	_HTKIAQFI_					0	0	0			REV__ENSG00000105707|ENST00000672452|HPN	REV__ENSG00000105707|ENST00000672452|HPN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2781982421875	2	479.279452	956.544351	-0.90579	-0.00043413	-2.9645	-0.0014208	-3.8703	-0.001855	479.2779542538447	97.646	1.4109	97.646	97.118	98.528	0					77	33	3	0	0	0	0.85277	1	9787	9787		25.45	0.93098	1	589630	+		14996	17564	10339	10348	17257	17257					0.0643408151404401
HTKIAQFI	8	Unmodified	_HTKIAQFI_					0	0	0			REV__ENSG00000105707|ENST00000672452|HPN	REV__ENSG00000105707|ENST00000672452|HPN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2783508300781	2	479.279452	956.544351	-1.4767	-0.00070776	-2.9072	-0.0013934	-4.3839	-0.0021011	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.91005	1	7747	7747		42.474	3.6683	1	1785900	+		14997	17564	10339	10348	17258	17258					0.0643408151404401
HTKIHICLSL	10	Unmodified	_HTKIHICLSL_					0	0	0			REV__ENST00000497526.1_1_2:113489082-113489184:+|nuORF	REV__ENST00000497526.1_1_2:113489082-113489184:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8336181640625	2	582.831526	1163.6485	2.3168	0.0013503	-0.37374	-0.00021783	1.943	0.0011325	582.8313275695042	94.548	3.2085	94.489	93.331	96.54	-0.059212					184	75	3	0	0	0	0.86272	1	10052	10052		24.519	0	1	663000	+		14998	27771	10340	10349	17259	17259					0.07322040279245812
HTKKKTHHS	9	Unmodified	_HTKKKTHHS_					0	0	0		nc|ENSG00000123473|Q15468|STIL;ENSG00000123473|ENST00000371877|STIL	nc|ENSG00000123473|Q15468|STIL	nc|ENSG00000123473|Q15468|STIL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3064575195312	2	552.307064	1102.59957	0.26261	0.00014504	-1.3923	-0.00076898	-1.1297	-0.00062394	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.69624	1	9276	9276		40.778	5.1599	1	1950800			14999	3275	10341	10350	17260	17260					0.05237888034525895
HTKKLQNIRT	10	Unmodified	_HTKKLQNIRT_					0	0	0		L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|148|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|148|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|148|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8695678710938	2	619.870028	1237.7255	1.2689	0.00078657	-2.206	-0.0013675	-0.93712	-0.00058089	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.86218	1	9916	9916		32.812	0.061884	1	6493200			15000	14559	10342	10351	17261	17261					0.11614974819917734
HTKKRFCL	8	Unmodified	_HTKKRFCL_					0	0	0			REV__ENSG00000188089|ENST00000696112|PLA2G4E	REV__ENSG00000188089|ENST00000696112|PLA2G4E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7935180664062	2	516.792204	1031.56985	-0.047502	-2.4548E-05	2.5031	0.0012936	2.4556	0.001269	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.86288	1	8995	8995		26.796	3.7536	1	692890	+		15001	22977	10343	10352	17262	17262					0.055332327648102364
HTKKRFCL	8	Unmodified	_HTKKRFCL_					0	0	0			REV__ENSG00000188089|ENST00000696112|PLA2G4E	REV__ENSG00000188089|ENST00000696112|PLA2G4E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.79345703125	2	516.792204	1031.56985	0.70992	0.00036688	1.7082	0.0008828	2.4181	0.0012497	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.87479	1	8843	8843		30.504	1.3336	1	842420	+		15002	22977	10343	10352	17263	17263					0.055332327648102364
HTKKRFCL	8	Unmodified	_HTKKRFCL_					0	0	0			REV__ENSG00000188089|ENST00000696112|PLA2G4E	REV__ENSG00000188089|ENST00000696112|PLA2G4E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7938232421875	2	516.792204	1031.56985	-1.5588	-0.00080555	3.969	0.0020511	2.4102	0.0012456	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.87922	1	8646	8646		31.955	2.8053	1	755180	+		15003	22977	10343	10352	17264	17264					0.055332327648102364
HTKKRRRTVN	10	Unmodified	_HTKKRRRTVN_					0	0	0			REV__nc|ENSG00000205057|Q5K130|CLLU1-AS1	REV__nc|ENSG00000205057|Q5K130|CLLU1-AS1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5976867675781	3	432.597088	1294.76943	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.75	1	107.72	107.22	108.22	-0.031487								0	0	0	0.45132	1	11949	11949		20.03	0.7678	1		+		15004	30168	10344	10353	17265	17265					0.13384004036947772
HTKKRRRTVN	10	Unmodified	_HTKKRRRTVN_					0	0	0			REV__nc|ENSG00000205057|Q5K130|CLLU1-AS1	REV__nc|ENSG00000205057|Q5K130|CLLU1-AS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3934326171875	2	648.391993	1294.76943	-1.1411	-0.00073988	1.6995	0.0011019	0.5584	0.00036206	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.86444	1	12868	12868		14.865	2.0532	1	2297700	+		15005	30168	10344	10353	17266	17266					0.13384004036947772
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3302001953125	2	567.330539	1132.64652	-0.54401	-0.00030863	-0.26969	-0.00015301	-0.81371	-0.00046164	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.80179	2	8690	8690;8833		39.253	6.4404	1	4477200	+		15006	23288	10345	10354	17267;17268	17267					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3297729492188	2	567.330539	1132.64652	-1.2008	-0.00068122	0.41426	0.00023502	-0.78649	-0.0004462	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.8608	2	9280	9268;9280		34.173	2.5383	1	5763000	+		15007	23288	10345	10354	17269;17270	17270					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.330078125	2	567.330539	1132.64652	-1.2006	-0.00068114	-0.16538	-9.3826E-05	-1.366	-0.00077496	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.86348	3	9525	9525;9863;9875		31.53	4.0048	1	15673000	+		15008	23288	10345	10354	17271;17272;17273	17271					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3299560546875	2	567.330539	1132.64652	1.5887	0.00090129	-2.6625	-0.0015105	-1.0739	-0.00060923	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.86587	3	9533	9401;9533;9545		29.17	4.6509	1	5459400	+		15009	23288	10345	10354	17274;17275;17276	17275					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3297729492188	2	567.330539	1132.64652	1.8589	0.0010546	-3.1789	-0.0018035	-1.32	-0.00074889	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86587	1	10056	10056		29.17	3.596	1	15439000	+		15010	23288	10345	10354	17277	17277					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3299560546875	2	567.330539	1132.64652	1.492	0.00084643	-2.5283	-0.0014344	-1.0363	-0.00058793	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.86587	1	9385	9385		29.17	1.2878	1	5346500	+		15011	23288	10345	10354	17278	17278					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3299560546875	2	567.330539	1132.64652	1.497	0.00084932	-2.8559	-0.0016202	-1.3589	-0.00077092	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.86348	2	9599	9599;9828		31.53	3.6476	1	15259000	+		15012	23288	10345	10354	17279;17280	17279					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.330539	1132.64652	0.48094	0.00027285	-1.4928	-0.00084691	-1.0119	-0.00057406	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.8545	2	8909	8898;8909		36.447	4.9169	1	6590100	+		15013	23288	10345	10354	17281;17282	17282					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3305053710938	2	567.330539	1132.64652	0.4851	0.00027521	-1.8618	-0.0010563	-1.3767	-0.00078107	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.54701	3	9607	9292;9607;9812		52.937	20.124	1	18558000	+		15014	23288	10345	10354	17283;17284;17285	17284					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3301391601562	2	567.330539	1132.64652	0.79571	0.00045143	-2.2136	-0.0012558	-1.4178	-0.00080439	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.81117	4	9633	9235;9633;9749;9772		38.754	9.5835	1	18145000	+		15015	23288	10345	10354	17286;17287;17288;17289	17287					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.329833984375	2	567.330539	1132.64652	-1.3957	-0.00079181	0.07479	4.2431E-05	-1.3209	-0.00074938	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86338	2	9585	9477;9585		31.634	4.9414	1	17338000	+		15016	23288	10345	10354	17290;17291	17291					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3301391601562	2	567.330539	1132.64652	1.203	0.00068247	-1.0748	-0.00060977	0.12815	7.2702E-05	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.8486	2	10766	10552;10766		26.693	1.1189	1	4990000	+		15017	23288	10345	10354	17292;17293	17293					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.330078125	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.86348	2	10955	10955;10991		31.53	1.0262	1	6182600	+		15018	23288	10345	10354	17294;17295	17294					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3309326171875	2	567.330539	1132.64652	1.9149	0.0010864	-2.2359	-0.0012685	-0.32096	-0.00018209	567.3293271441571	103.38	0.97102	103.61	103.31	104.28	0.22556					36	23	2	0	0	0	0.86621	1	12567	12567		26.063	0.48933	1	586580	+		15019	23288	10345	10354	17296	17296					0.08550747585650242
HTKLHAIRAS	10	Unmodified	_HTKLHAIRAS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3299560546875	2	567.330539	1132.64652	0.27026	0.00015333	-1.2412	-0.00070419	-0.97098	-0.00055087	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.86587	1	10929	10929		29.17	0.020503	1	6007000	+		15020	23288	10345	10354	17297	17297					0.08550747585650242
HTKLHRKLS	9	Unmodified	_HTKLHRKLS_					0	0	0			REV__ENSG00000173275|ENST00000339249|ZNF449	REV__ENSG00000173275|ENST00000339249|ZNF449	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3402099609375	2	560.340907	1118.66726	-0.60038	-0.00033642	-0.59029	-0.00033076	-1.1907	-0.00066718	560.3405348095038	89.752	2.8802	89.752	87.726	90.606	0					163	66	4	0	0	0	0.7932	1	8692	8692		24.519	1.4767	1	504890	+		15021	21913	10346	10355	17298	17298					0.11267337965318802
HTKLHRKLS	9	Unmodified	_HTKLHRKLS_					0	0	0			REV__ENSG00000173275|ENST00000339249|ZNF449	REV__ENSG00000173275|ENST00000339249|ZNF449	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3402099609375	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.76764	6	11108	11000;11108;11120;11142;11179;11276		34.173	3.6689	1	81463000	+		15022	21913	10346	10355	17299;17300;17301;17302;17303;17304	17300					0.11267337965318802
HTKLHRKLS	9	Unmodified	_HTKLHRKLS_					0	0	0			REV__ENSG00000173275|ENST00000339249|ZNF449	REV__ENSG00000173275|ENST00000339249|ZNF449	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3401489257812	2	560.340907	1118.66726	0.86176	0.00048288	-2.22	-0.001244	-1.3582	-0.00076107	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.77696	4	10738	10738;10750;10774;10834		31.53	7.3271	1	126390000	+		15023	21913	10346	10355	17305;17306;17307;17308	17305					0.11267337965318802
HTKLPLIFH	9	Unmodified	_HTKLPLIFH_					0	0	0		ENSG00000141012|ENST00000268695|GALNS;ENST00000568613.5_1_16:88880849-88909575:-|nuORF	ENSG00000141012|ENST00000268695|GALNS	ENSG00000141012|ENST00000268695|GALNS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.832763671875	2	553.329476	1104.6444	2.7435	0.0015181	2.5791	0.0014271	5.3227	0.0029452	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.7932	1	10568	10568		23.042	2.0956	1	4237100			15024	4475	10347	10356	17309	17309					0.09626318847858784
HTKRHEILN	9	Unmodified	_HTKRHEILN_					0	0	0			REV__ENSG00000187792|ENST00000341976|ZNF70	REV__ENSG00000187792|ENST00000341976|ZNF70	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3181762695312	2	574.320171	1146.62579	0.81882	0.00047026	-1.9949	-0.0011457	-1.1761	-0.00067548	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.76419	1	9590	9590		35.152	2.4015	1	1866200	+		15025	22950	10348	10357	17310	17310					0.0583415720600442
HTKRQVNKMVL	11	Unmodified	_HTKRQVNKMVL_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9320983886719	3	451.930968	1352.77107	2.3813	0.0010762	1.451	0.00065573	3.8323	0.0017319	451.9315121357165	99.085	2.2621	99.03	97.603	99.866	-0.054817					133	52	3	0	0	0	0.71207	1	10716	10716		29.551	6.1728	1	545200	+		15026	20437;29946	10349	10358	17311	17311					0.10879877010688688
HTKVHKRLS	9	Unmodified	_HTKVHKRLS_					0	0	0			REV__ENSG00000188033|ENST00000311437|ZNF490	REV__ENSG00000188033|ENST00000311437|ZNF490	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3323974609375	2	553.333082	1104.65161	-1.4413	-0.00079751	0.24372	0.00013486	-1.1976	-0.00066265	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.7932	1	9887	9887		19.997	0.89325	1	2490200	+		15027	22972	10350	10359	17312	17312					0.10347051448297861
HTKVLQLSSRP	11	Unmodified	_HTKVLQLSSRP_					0	0	0			REV__ENST00000603865.1_1_11:75507249-75507624:+|nuORF	REV__ENST00000603865.1_1_11:75507249-75507624:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3692016601562	2	633.369861	1264.72517	-0.11908	-7.5423E-05	-0.90029	-0.00057022	-1.0194	-0.00064564	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.66929	1	9659	9659		36.447	2.2742	1	2722900	+		15028	29350	10351	10360	17313	17313					0.10339555100085818
HTKVLQLSSRP	11	Unmodified	_HTKVLQLSSRP_					0	0	0			REV__ENST00000603865.1_1_11:75507249-75507624:+|nuORF	REV__ENST00000603865.1_1_11:75507249-75507624:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.368896484375	2	633.369861	1264.72517	1.4675	0.00092945	-2.7221	-0.0017241	-1.2546	-0.00079462	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.69331	1	9769	9769		36.318	7.1681	1	5460600	+		15029	29350	10351	10360	17314	17314					0.10339555100085818
HTKVLQLSSRP	11	Unmodified	_HTKVLQLSSRP_					0	0	0			REV__ENST00000603865.1_1_11:75507249-75507624:+|nuORF	REV__ENST00000603865.1_1_11:75507249-75507624:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3694458007812	2	633.369861	1264.72517	0.88638	0.00056141	-2.1201	-0.0013428	-1.2337	-0.0007814	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.59499	2	9647	9647;9795		45.022	2.1579	1	5166300	+		15030	29350	10351	10360	17315;17316	17315					0.10339555100085818
HTKVLQLSSRP	11	Unmodified	_HTKVLQLSSRP_					0	0	0			REV__ENST00000603865.1_1_11:75507249-75507624:+|nuORF	REV__ENST00000603865.1_1_11:75507249-75507624:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3670043945312	2	633.369861	1264.72517	1.4972	0.00094828	-2.4939	-0.0015795	-0.99665	-0.00063125	633.3681812370636	95.449	2.3087	95.87	94.551	96.859	0.42051					197	55	4	0	0	0	0.72106	1	11544	11544		28.081	1.3886	1	3612700	+		15031	29350	10351	10360	17317	17317					0.10339555100085818
HTKYPQLLLGI	11	Unmodified	_HTKYPQLLLGI_					0	0	0		ENST00000420053.1_1_2:105012170-105012470:-|nuORF	ENST00000420053.1_1_2:105012170-105012470:-|nuORF	ENST00000420053.1_1_2:105012170-105012470:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8822021484375	2	641.87953	1281.74451	2.2004	0.0014124	2.3254	0.0014926	4.5258	0.002905	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.5603	2	10572	10501;10572		47.657	3.2801	1	3624200			15032	11444	10352	10361	17318;17319	17319					0.11490511391002656
HTKYPQLLLGI	11	Unmodified	_HTKYPQLLLGI_					0	0	0		ENST00000420053.1_1_2:105012170-105012470:-|nuORF	ENST00000420053.1_1_2:105012170-105012470:-|nuORF	ENST00000420053.1_1_2:105012170-105012470:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8821411132812	2	641.87953	1281.74451	1.6823	0.0010798	2.8836	0.0018509	4.5658	0.0029307	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.5603	2	10386	10349;10386		47.657	6.8792	1	3772700			15033	11444	10352	10361	17320;17321	17321					0.11490511391002656
HTKYPQLLLGI	11	Unmodified	_HTKYPQLLLGI_					0	0	0		ENST00000420053.1_1_2:105012170-105012470:-|nuORF	ENST00000420053.1_1_2:105012170-105012470:-|nuORF	ENST00000420053.1_1_2:105012170-105012470:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.882080078125	2	641.87953	1281.74451	1.5974	0.0010254	2.9074	0.0018662	4.5048	0.0028915	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.68378	1	10055	10055		34.173	6.0911	1	4266200			15034	11444	10352	10361	17322	17322					0.11490511391002656
HTKYPQLLLGI	11	Unmodified	_HTKYPQLLLGI_					0	0	0		ENST00000420053.1_1_2:105012170-105012470:-|nuORF	ENST00000420053.1_1_2:105012170-105012470:-|nuORF	ENST00000420053.1_1_2:105012170-105012470:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8823852539062	2	641.87953	1281.74451	0.91411	0.00058675	3.6201	0.0023236	4.5342	0.0029104	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.69995	2	10147	10147;10245		31.53	1.2121	1	4136300			15035	11444	10352	10361	17323;17324	17323					0.11490511391002656
HTLAIVCL	8	Unmodified	_HTLAIVCL_					0	0	0		ENSG00000175920|ENST00000340083|DOK7;nc|ENSG00000175920|Q18PE1-3|DOK7;nc|ENSG00000175920|Q18PE1-4|DOK7	ENSG00000175920|ENST00000340083|DOK7	ENSG00000175920|ENST00000340083|DOK7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2519836425781	2	435.249306	868.484059	2.2466	0.00097783	2.1989	0.00095706	4.4455	0.0019349	435.2501663639107	92.812	1.5534	92.857	92.283	93.837	0.045448					79	36	3	0	0	0	0.89457	1	9717	9717		37.028	8.7742	1	840940			15036	7045	10353	10362	17325	17325					0.04455647859299461
HTLALRVF	8	Unmodified	_HTLALRVF_					0	0	0			REV__nc|ENSG00000166391|Q3SYC2-2|MOGAT2	REV__nc|ENSG00000166391|Q3SYC2-2|MOGAT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.7853088378906	2	478.787444	955.560336	-0.98121	-0.00046979	-1.3477	-0.00064529	-2.329	-0.0011151	478.7857916206205	92.576	2.3382	92.576	91.633	93.971	0					123	53	4	0	0	0	0.86791	1	9076	9076		28.254	0.37203	1	417180	+		15037	21288	10354	10363	17326	17326					0.08077787750949028
HTLFIAIYTLI	11	Unmodified	_HTLFIAIYTLI_					0	0	0			REV__ENSG00000163485|ENST00000337894|ADORA1	REV__ENSG00000163485|ENST00000337894|ADORA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	3	435.591946	1303.75401	1.0142	0.00044176	-4.1896	-0.001825	-3.1755	-0.0013832	435.5900207046561	37.177	0.33788	37.663	37.492	37.83	0.4858					13	7	3	0	0	0	0.1767	1	3005	3005		18.531	9.7317	1	96956	+		15038	20921	10355	10364	17327	17327					0.1142827967651101
HTLGLKEI	8	Unmodified	_HTLGLKEI_					0	0	0		ENST00000366812.5_1_1:226334087-226334237:-|nuORF	ENST00000366812.5_1_1:226334087-226334237:-|nuORF	ENST00000366812.5_1_1:226334087-226334237:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.2486267089844	2	455.77146	909.528367	-0.058797	-2.6798E-05	-4.4137	-0.0020117	-4.4725	-0.0020384	455.76796461984145	54.076	0.20964	54.098	54.031	54.241	0.022541					6	5	2	0	0	0	0.4196	1	4791	4791		30.504	9.5567	1	18348			15039	10520	10356	10365	17328	17328					0.06998375277146351
HTLGLSSTR	9	Unmodified	_HTLGLSSTR_					0	0	0		ENST00000361871.7_2_16:1988507-1988831:-|nuORF	ENST00000361871.7_2_16:1988507-1988831:-|nuORF	ENST00000361871.7_2_16:1988507-1988831:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.26678466796875	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.69624	1	8681	8681		40.778	5.1599	1	1702800			15040	10494	10357	10366	17329	17329					0.033154016406683695
HTLHLQLHIKN	11	Unmodified	_HTLHLQLHIKN_					0	0	0			REV__ENSG00000140836|ENST00000268489|ZFHX3	REV__ENSG00000140836|ENST00000268489|ZFHX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9326477050781	3	451.929844	1352.7677	2.5866	0.001169	3.6676	0.0016575	6.2542	0.0028264	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.71803	1	10961	10961		28.577	6.0151	1	1152500	+		15041	15640	10358	10367	17330	17330					0.1054295022831866
HTLHLRDR	8	Unmodified	_HTLHLRDR_					0	0	0		ENST00000527129.1_1_11:76831698-76834913:+|nuORF;ENSG00000149260|ENST00000648180|CAPN5	ENST00000527129.1_1_11:76831698-76834913:+|nuORF	ENST00000527129.1_1_11:76831698-76834913:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8274536132812	2	524.293956	1046.57336	-0.03958	-2.0752E-05	-4.108	-0.0021538	-4.1476	-0.0021745	524.2912194799414	99.77	1.8383	99.811	99.097	100.93	0.0411					92	42	3	0	0	0	0.4196	1	10665	10665		45.952	7.1458	1	574600			15042	5010	10359	10368	17331	17331					0.05193618863017946
HTLICFVF	8	Unmodified	_HTLICFVF_					0	0	0			REV__nc|ENSG00000003400|Q92851-6|CASP10	REV__nc|ENSG00000003400|Q92851-6|CASP10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.25787353515625	2	490.257131	978.499709	1.5736	0.00077149	0.2554	0.00012521	1.829	0.0008967	490.25714425919216	107.1	2.1346	107.2	105.77	107.9	0.10396					168	84	3	0	0	0	0.90024	1	13066	13066		39.021	3.4032	1	1431500	+		15043	16051	10360	10369	17332	17332					0.00959934376351157
HTLKEIADS	9	Unmodified	_HTLKEIADS_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	507.7671203613281	2	507.266739	1012.51892	0.20674	0.00010487	2.0097	0.0010195	2.2165	0.0011243	507.76852386098153	33.893	0.56977	34.001	33.659	34.229	0.10829					41	26	2	0	0	0	0.58668	1	1685	1685		47.657	5.2612	1	88435			15044	8813	10361	10370	17333	17333					0.013165622009410072
HTLKEIADS	9	Unmodified	_HTLKEIADS_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	507.266739	1012.51892	-1.6843	-0.00085438	3.5729	0.0018124	1.8886	0.00095801	507.2692769694104	34.141	0.47757	34.141	33.981	34.458	0	0.004151	0.0011079	NaN	47.657	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28511			15045	8813	10361	10370							0.013165622009410072
HTLKEIADS	9	Unmodified	_HTLKEIADS_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	507.266739	1012.51892	0.0323	1.6385E-05	2.8249	0.001433	2.8572	0.0014493	507.26755309736654	34.113	0.71716	34.109	33.737	34.454	-0.0047417	-0.027814	0.00034898	NaN	47.657	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43023			15046	8813	10361	10370							0.013165622009410072
HTLKEIADS	9	Unmodified	_HTLKEIADS_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	507.266739	1012.51892	-0.32713	-0.00016594	-0.14753	-7.4836E-05	-0.47466	-0.00024078	507.26552377293643	34.163	0.94419	34.107	33.866	34.81	-0.056385	-0.029663	-0.0026666	NaN	47.657	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62024			15047	8813	10361	10370							0.013165622009410072
HTLKEIADS	9	Unmodified	_HTLKEIADS_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	507.266739	1012.51892	-1.1887	-0.000603	2.8353	0.0014382	1.6466	0.00083524	507.2674506602948	34.065	0.81318	34.068	33.706	34.519	0.0026016	-0.068302	0.00035956	NaN	47.657	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64554			15048	8813	10361	10370							0.013165622009410072
HTLKEIADS	9	Unmodified	_HTLKEIADS_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	507.266739	1012.51892	-0.51331	-0.00026039	3.4983	0.0017746	2.985	0.0015142	507.2687202277462	34.159	0.41739	34.205	33.945	34.362	0.045853	0.068339	0.0010322	NaN	47.657	26	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65373			15049	8813	10361	10370							0.013165622009410072
HTLKEIADS	9	Unmodified	_HTLKEIADS_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	507.266739	1012.51892	0.58511	0.00029681	3.2476	0.0016474	3.8327	0.0019442	507.2680535688895	33.972	0.5798	34.182	33.942	34.522	0.21003	0.045615	0.0007779	NaN	47.657	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114390			15050	8813	10361	10370							0.013165622009410072
HTLKEIADS	9	Unmodified	_HTLKEIADS_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	507.266739	1012.51892	1.9735	0.0010011	1.7288	0.00087695	3.7023	0.001878	507.26724936965365	33.974	0.65855	34.279	34.076	34.735	0.30495	0.14293	-0.00076302	NaN	47.657	18	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116790			15051	8813	10361	10370							0.013165622009410072
HTLKHTQIR	9	Unmodified	_HTLKHTQIR_					0	0	0		ENSG00000163885|ENST00000352312|CFAP100;nc|ENSG00000163885|Q494V2-2|CFAP100	ENSG00000163885|ENST00000352312|CFAP100	ENSG00000163885|ENST00000352312|CFAP100	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3287963867188	2	567.330539	1132.64652	-1.2006	-0.00068114	-0.16538	-9.3826E-05	-1.366	-0.00077496	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.76764	1	10092	10092		34.173	1.3601	1	15673000			15052	5878	10362	10371	17334	17334					0.08550747585650242
HTLKIKDARLS	11	Unmodified	_HTLKIKDARLS_					0	0	0		ENSG00000179057|ENST00000513874|IGSF22;nc|ENSG00000179057|Q8N9C0|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.3838500976562	2	641.385511	1280.75647	1.6527	0.00106	-3.143	-0.0020159	-1.4904	-0.00095591	641.383219573957	102.66	1.2178	102.7	102.3	103.51	0.043198					82	29	4	0	0	0	0.70737	1	11127	11127		30.318	1.1682	1	1834000			15053	7241	10363	10372	17335	17335					0.12732128134166487
HTLKIKDARLS	11	Unmodified	_HTLKIKDARLS_					0	0	0		ENSG00000179057|ENST00000513874|IGSF22;nc|ENSG00000179057|Q8N9C0|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.3851928710938	2	641.385511	1280.75647	1.6005	0.0010265	-3.2502	-0.0020846	-1.6497	-0.0010581	641.3830342191151	102.5	1.0016	102.69	102.29	103.29	0.19484					61	24	4	0	0	0	0.55601	1	10821	10821		47.96	6.5329	1	1516700			15054	7241	10363	10372	17336	17336					0.12732128134166487
HTLLALMA	8	Unmodified	_HTLLALMA_					0	0	0			REV__nc|ENSG00000004866|Q9NRC1-4|ST7	REV__nc|ENSG00000004866|Q9NRC1-4|ST7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25177001953125	2	435.249306	868.484059	2.2466	0.00097783	2.1989	0.00095706	4.4455	0.0019349	435.2501663639107	92.812	1.5534	92.857	92.283	93.837	0.045448					79	36	3	0	0	0	0.86288	1	9705	9705		26.796	0	1	840940	+		15055	16067	10364	10373	17337	17337					0.04455647859299461
HTLLEYLL	8	Unmodified	_HTLLEYLL_					0	0	0		ENSG00000104951|ENST00000391826|IL4I1;nc|ENSG00000104951|Q96RQ9-2|IL4I1	ENSG00000104951|ENST00000391826|IL4I1	ENSG00000104951|ENST00000391826|IL4I1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.5986328125	2	501.286943	1000.55933	0.40413	0.00020259	-2.1745	-0.00109	-1.7703	-0.00088745	501.2852451418763	63.985	0.42961	64.539	64.256	64.686	0.5545					13	9	2	0	0	0	0.4196	1	6900	6900		42.474	0	1	70926			15056	2172	10365	10374	17338	17338					0.059075285913763764
HTLLHMALAP	10	Unmodified	_HTLLHMALAP_					0	0	0			REV__ENSG00000215397|ENST00000246104|SCRT2	REV__ENSG00000215397|ENST00000246104|SCRT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3057250976562	2	552.305144	1102.59573	0.78015	0.00043088	1.5185	0.00083868	2.2987	0.0012696	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.84112	1	9460	9460		37.159	1.5408	1	1841700	+		15057	23683	10366	10375	17339	17339					0.04854082216434108
HTLLHMALAP	10	Unmodified	_HTLLHMALAP_					0	0	0			REV__ENSG00000215397|ENST00000246104|SCRT2	REV__ENSG00000215397|ENST00000246104|SCRT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.306640625	2	552.305144	1102.59573	-1.4446	-0.00079788	3.8767	0.0021411	2.432	0.0013432	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.86452	1	9277	9277		30.504	2.4222	1	1677300	+		15058	23683	10366	10375	17340	17340					0.04854082216434108
HTLLRLCK	8	Unmodified	_HTLLRLCK_					0	0	0			REV__ENSG00000130294|ENST00000498729|KIF1A	REV__ENSG00000130294|ENST00000498729|KIF1A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2982177734375	2	492.294579	982.574605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.38	1	65.506	65.006	66.006	0.12545								0	0	0	0.3037	1	5797	5797		18.324	1.607	1		+		15059	18864	10367	10376	17341	17341					0.08262116907587824
HTLLSCKV	8	Unmodified	_HTLLSCKV_					0	0	0		ENSG00000158615|ENST00000367188|PPP1R15B	ENSG00000158615|ENST00000367188|PPP1R15B	ENSG00000158615|ENST00000367188|PPP1R15B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7546691894531	2	450.752213	899.489873	0.78549	0.00035406	3.5542	0.0016021	4.3397	0.0019561	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.884	1	8062	8062		33.516	1.5607	1	420760			15060	5490	10368	10377	17342	17342					0.036107463709754484
HTLPAAPLPA	10	Unmodified	_HTLPAAPLPA_					0	0	0		ENST00000574501.1_1_17:1963882-1964287:-|nuORF	ENST00000574501.1_1_17:1963882-1964287:-|nuORF	ENST00000574501.1_1_17:1963882-1964287:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.30108642578125	2	494.284734	986.554916	-0.82718	-0.00040886	0.67355	0.00033293	-0.15363	-7.5936E-05	494.2867605770624	97.742	0.6834	97.742	97.337	98.02	0					25	15	3	0	0	0	0.37624	1	9844	9844		38.806	14.603	1	225640			15061	14035	10369	10378	17343	17343					0.06110064168467488
HTLPLIPPDT	10	Unmodified	_HTLPLIPPDT_					0	0	0			REV__ENSG00000154127|ENST00000284273|UBASH3B	REV__ENSG00000154127|ENST00000284273|UBASH3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3064575195312	2	552.308406	1102.60226	0.78014	0.00043088	-4.3887	-0.0024239	-3.6085	-0.001993	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.86718	1	9357	9357		27.882	3.3631	1	1841700	+		15062	20368	10370	10379	17344	17344					0.05506298648788288
HTLPRQLRV	9	Unmodified	_HTLPRQLRV_					0	0	0			REV__ENST00000482665.1_1_16:334415-335240:+|nuORF	REV__ENST00000482665.1_1_16:334415-335240:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3404541015625	2	560.340907	1118.66726	0.86176	0.00048288	-2.22	-0.001244	-1.3582	-0.00076107	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.7932	1	11020	11020		23.042	2.0956	1	126390000	+		15063	27470	10371	10380	17345	17345					0.11267337965318802
HTLQLKLSSA	10	Unmodified	_HTLQLKLSSA_					0	0	0			REV__ENSG00000188996|ENST00000380907|HUS1B	REV__ENSG00000188996|ENST00000380907|HUS1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.3173828125	2	549.319306	1096.62406	-0.54475	-0.00029924	-2.4274	-0.0013334	-2.9721	-0.0016327	549.3179138519522	101.15	1.9875	101.19	100.7	102.69	0.031036					127	47	4	0	0	0	0.86272	1	10773	10773		24.519	1.4767	1	2171100	+		15064	23053	10372	10381	17346	17346					0.0796110339738334
HTLQQILEQW	10	Unmodified	_HTLQQILEQW_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.392578125	2	648.340769	1294.66699	-1.1409	-0.00073969	-4.1556	-0.0026943	-5.2965	-0.0034339	648.3385133550805	106.18	0.44574	106.23	105.98	106.43	0.053749					13	10	2	0	0	0	0.37624	1	11260	11260		52.937	33.833	1	76294	+		15065	19832	10373	10382	17347	17347					0.03143873454791901
HTLRALRNTL	10	Unmodified	_HTLRALRNTL_					0	0	0		ENSG00000198286|ENST00000396946|CARD11	ENSG00000198286|ENST00000396946|CARD11	ENSG00000198286|ENST00000396946|CARD11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8562622070312	2	597.856921	1193.69929	-1.2962	-0.00077492	0.5934	0.00035477	-0.70276	-0.00042015	598.3589924641743	94.317	5.5544	94.515	93.356	98.911	0.19827					368	130	4	0	0	0	0.54701	1	9639	9639		52.937	0	1	9481100			15066	8262	10374	10383	17348	17348					0.11018705648439209
HTLRANKLH	9	Unmodified	_HTLRANKLH_					0	0	0			REV__ENSG00000099625|ENST00000650044|CBARP;REV__nc|ENSG00000099625|Q8N350-4|CBARP	REV__nc|ENSG00000099625|Q8N350-4|CBARP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3167724609375	2	545.317432	1088.62031	-0.68757	-0.00037494	-0.58844	-0.00032088	-1.276	-0.00069583	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.78536	1	8582	8582		29.15	0	1	3608000	+		15067	17098;29734	10375	10384	17349	17349					0.07954478414171717
HTLRANKLH	9	Unmodified	_HTLRANKLH_					0	0	0			REV__ENSG00000099625|ENST00000650044|CBARP;REV__nc|ENSG00000099625|Q8N350-4|CBARP	REV__nc|ENSG00000099625|Q8N350-4|CBARP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3169555664062	2	545.317432	1088.62031	1.26	0.0006871	-2.0594	-0.001123	-0.79936	-0.00043591	545.3161515624204	102.43	0.93845	102.48	101.97	102.91	0.043198					60	22	4	0	0	0	0.78536	1	11087	11087		29.15	3.6994	1	907160	+		15068	17098;29734	10375	10384	17350	17350					0.07954478414171717
HTLRARLAPA	10	Unmodified	_HTLRARLAPA_					0	0	0			REV__ENSG00000135723|ENST00000258201|FHOD1	REV__ENSG00000135723|ENST00000258201|FHOD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3324584960938	2	553.333082	1104.65161	-0.52136	-0.00028848	-0.54387	-0.00030094	-1.0652	-0.00058943	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.85934	1	9736	9736		35.618	0.46626	1	2365500	+		15069	19242	10376	10385	17351	17351					0.10347051448275124
HTLRARLAPA	10	Unmodified	_HTLRARLAPA_					0	0	0			REV__ENSG00000135723|ENST00000258201|FHOD1	REV__ENSG00000135723|ENST00000258201|FHOD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.332763671875	2	553.333082	1104.65161	-0.75754	-0.00041917	-0.44783	-0.0002478	-1.2054	-0.00066697	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.74274	1	10175	10175		42.396	4.5846	1	4355400	+		15070	19242	10376	10385	17352	17352					0.10347051448275124
HTLRARLAPA	10	Unmodified	_HTLRARLAPA_					0	0	0			REV__ENSG00000135723|ENST00000258201|FHOD1	REV__ENSG00000135723|ENST00000258201|FHOD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.3323974609375	2	553.333082	1104.65161	2.7435	0.0015181	-3.9365	-0.0021782	-1.193	-0.00066013	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.86218	1	10421	10421		32.812	8.6097	1	4237100	+		15071	19242	10376	10385	17353	17353					0.10347051448275124
HTLRARLAPA	10	Unmodified	_HTLRARLAPA_					0	0	0			REV__ENSG00000135723|ENST00000258201|FHOD1	REV__ENSG00000135723|ENST00000258201|FHOD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3323974609375	2	553.333082	1104.65161	1.2853	0.00071117	-2.555	-0.0014138	-1.2698	-0.00070261	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.86718	2	10264	10264;10339		27.882	1.1189	1	4524400	+		15072	19242	10376	10385	17354;17355	17354					0.10347051448275124
HTLRARLAPA	10	Unmodified	_HTLRARLAPA_					0	0	0			REV__ENSG00000135723|ENST00000258201|FHOD1	REV__ENSG00000135723|ENST00000258201|FHOD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.3323974609375	2	553.333082	1104.65161	0.28517	0.0001578	-1.4807	-0.00081935	-1.1956	-0.00066155	553.3321125200671	96.704	2.3133	96.935	96.395	98.708	0.23103					137	53	4	0	0	0	0.82886	1	10002	10002		37.812	12.237	1	3367100	+		15073	19242	10376	10385	17356	17356					0.10347051448275124
HTLRMIALVL	10	Unmodified	_HTLRMIALVL_					0	0	0		ENST00000432329.6_1_2:208464230-208464308:+|nuORF	ENST00000432329.6_1_2:208464230-208464308:+|nuORF	ENST00000432329.6_1_2:208464230-208464308:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.8585815429688	2	583.857544	1165.70053	-0.80586	-0.00047051	3.1308	0.001828	2.325	0.0013575	583.8591949944405	98.804	2.4153	98.854	98.351	100.77	0.049828					137	55	4	0	0	0	0.86218	1	10455	10455		32.812	4.7309	1	1986800			15074	11664	10377	10386	17357	17357					0.12431203692995041
HTLRPRLLSA	10	Unmodified	_HTLRPRLLSA_					0	0	0		nc|ENSG00000227456|P59036|LINC00310	nc|ENSG00000227456|P59036|LINC00310	nc|ENSG00000227456|P59036|LINC00310	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3528442382812	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.86802	1	12680	12680		27.047	5.0874	1	3937500			15075	15267	10378	10387	17358	17358					0.11863607136797327
HTLRTWVF	8	Unmodified	_HTLRTWVF_					0	0	0		ENST00000492890.5_1_9:35561867-35563864:-|nuORF	ENST00000492890.5_1_9:35561867-35563864:-|nuORF	ENST00000492890.5_1_9:35561867-35563864:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2930908203125	2	530.290351	1058.56615	1.2413	0.00065826	4.439	0.0023539	5.6803	0.0030122	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.87922	2	9536	9536;9549		33.516	3.0119	1	1864800			15076	12710	10379	10388	17359;17360	17359					0.03920886262608292
HTLRTWVF	8	Unmodified	_HTLRTWVF_					0	0	0		ENST00000492890.5_1_9:35561867-35563864:-|nuORF	ENST00000492890.5_1_9:35561867-35563864:-|nuORF	ENST00000492890.5_1_9:35561867-35563864:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2930908203125	2	530.290351	1058.56615	1.6334	0.0008662	3.8232	0.0020274	5.4567	0.0028936	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.88601	1	10722	10722		34.173	1.3601	1	1816400			15077	12710	10379	10388	17361	17361					0.03920886262608292
HTLSVVVLMQ	10	Unmodified	_HTLSVVVLMQ_					0	0	0			REV__ENST00000295133.9_1_2:73483541-73483895:-|nuORF	REV__ENST00000295133.9_1_2:73483541-73483895:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.8164672851562	2	563.818084	1125.62162	0.45419	0.00025608	-1.65	-0.00093028	-1.1958	-0.0006742	563.8167702097873	55.166	0.92021	55.257	54.867	55.787	0.091167					32	25	2	0	0	0	0.8651	1	4669	4669		25.574	1.0549	1	107410	+		15078	24696	10380	10389	17362	17362					0.0638293166805397
HTLVAVLVLTG	11	Unmodified	_HTLVAVLVLTG_					0	0	0			REV__ENSG00000188051|ENST00000341130|TMEM221	REV__ENSG00000188051|ENST00000341130|TMEM221	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.8462524414062	2	561.847699	1121.68084	0.41142	0.00023115	-3.9205	-0.0022027	-3.509	-0.0019715	561.8453227320805	96.693	1.8248	96.924	96.437	98.262	0.23103					107	42	4	0	0	0	0.6921	1	9947	9947		32.812	1.2826	1	1323100	+		15079	22974	10381	10390	17363	17363					0.12487150953870696
HTLVTVYR	8	Unmodified	_HTLVTVYR_					0	0	0			REV__ENSG00000167359|ENST00000380211|OR51I1	REV__ENSG00000167359|ENST00000380211|OR51I1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7800598144531	2	494.782359	987.550165	-0.60063	-0.00029718	-3.4065	-0.0016855	-4.0071	-0.0019826	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.91977	1	8424	8424		45.952	3.5558	1	707910	+		15080	21380	10382	10391	17364	17364					0.0558918002569726
HTLWAKFKLN	10	Unmodified	_HTLWAKFKLN_					0	0	0		ENSG00000205857|ENST00000382119|NANOGNB	ENSG00000205857|ENST00000382119|NANOGNB	ENSG00000205857|ENST00000382119|NANOGNB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.226806640625	3	419.908269	1256.70298	-0.18784	-7.8877E-05	-1.2773	-0.00053634	-1.4651	-0.00061521	419.90724390038304	76.554	0.11201	76.603	76.54	76.652	0.049194					5	3	2	0	0	0	0.37624	1	7397	7397		15.333	8.6735	1	16513			15081	8544	10383	10392	17365	17365					0.08489375422345802
HTMPRWVKT	9	Unmodified	_HTMPRWVKT_					0	0	0		nc|ENSG00000147434|Q15825-2|CHRNA6;ENSG00000147434|ENST00000276410|CHRNA6	nc|ENSG00000147434|Q15825-2|CHRNA6	nc|ENSG00000147434|Q15825-2|CHRNA6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.3109741210938	2	578.308218	1154.60188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.37	1	111.42	110.92	111.92	0.041832								0	0	0	0.30778	1	13474	13474		27.882	1.1893	1				15082	4903	10384	10393	17366	17366					0.030766004479573894
HTNGLITTG	9	Unmodified	_HTNGLITTG_					0	0	0		ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.261962890625	2	457.240524	912.466495	-1.0262	-0.00046922	1.3598	0.00062174	0.33355	0.00015251	457.2398441732285	83.149	1.6659	83.581	82.754	84.419	0.43108					65	39	2	0	0	0	0.20789	1	9743	9743		54.776	30.574	1	76035			15083	7541	10385	10394	17367	17367					0.006760238579886391
HTNGPKKKKVT	11	Unmodified	_HTNGPKKKKVT_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30;ENST00000441384.5_1_3:47852163-47883242:+|nuORF;ENST00000470959.1_1_3:47868940-47872365:+|nuORF	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.3712158203125	2	619.372404	1236.73025	2.9405	0.0018212	-2.9614	-0.0018342	-0.020906	-1.2949E-05	619.3710459342678	101.7	2.0362	101.65	101.12	103.16	-0.049828					124	48	5	0	0	0	0.72739	1	11068	11068		27.047	0.98393	1	3045300			15084	3766	10386	10395	17368	17368					0.12135858962687962
HTNIKRYSA	9	Unmodified	_HTNIKRYSA_					0	0	0			REV__ENSG00000197646|ENST00000397747|PDCD1LG2	REV__ENSG00000197646|ENST00000397747|PDCD1LG2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3168334960938	2	545.293622	1088.57269	0.15628	8.5219E-05	-2.1952	-0.001197	-2.0389	-0.0011118	545.7965958523248	90.528	0.35327	90.745	90.591	90.944	0.21736					13	8	3	0	0	0	0.20789	1	9082	9082		42.396	2.338	1	176150	+		15085	23255	10387	10396	17369	17369					0.031947794233246896
HTNKIGRLDLV	11	Unmodified	_HTNKIGRLDLV_					0	0	0		nc|ENSG00000180113|O60522-2|TDRD6;ENSG00000180113|ENST00000316081|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3695678710938	2	633.369861	1264.72517	-0.087569	-5.5464E-05	-0.98413	-0.00062332	-1.0717	-0.00067878	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.68532	1	9924	9924		33.922	0	1	7059800			15086	7314	10388	10397	17370	17370					0.10339555100085818
HTNKKLTN	8	Unmodified	_HTNKKLTN_					0	0	0			REV__ENST00000541377.5_1_2:122097159-122097282:-|nuORF	REV__ENST00000541377.5_1_2:122097159-122097282:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8052673339844	2	478.269616	954.524678	-1.006	-0.00048116	1.0604	0.00050716	0.054366	2.6001E-05	478.27003789811204	37.878	0.6589	37.828	37.584	38.243	-0.050369					20	14	2	0	0	0	0.4196	1	2672	2672		10.866	0	1	111360	+		15087	28484	10389	10398	17371	17371					0.04559705503265832
HTNLTLSV	8	Unmodified	_HTNLTLSV_					0	0	0		ENST00000320560.12_1_12:45725150-45740856:+|nuORF	ENST00000320560.12_1_12:45725150-45740856:+|nuORF	ENST00000320560.12_1_12:45725150-45740856:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.74493408203125	2	442.745442	883.476331	-1.3932	-0.00061685	0.086771	3.8417E-05	-1.3065	-0.00057843	442.7453445250769	91.671	1.0672	91.892	91.506	92.573	0.22157					52	24	3	0	0	0	0.89962	1	9253	9253		38.806	1.7777	1	476200			15088	10027	10390	10399	17372	17372					0.029932118633723803
HTNMVCLLKKG	11	Unmodified	_HTNMVCLLKKG_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160;nc|ENSG00000030066|Q12769-3|NUP160	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	622.3377075195312	2	622.336118	1242.65768	1.3137	0.00081755	-1.3384	-0.00083293	-0.024711	-1.5379E-05	622.3350869567015	110.38	0.61507	110.5	110.27	110.88	0.11658					50	19	3	0	0	0	0.72892	1	11900	11900		23.523	0	1	758400			15089	880	10391	10400	17373	17373					0.046060655732617306
HTNPKWQLVL	10	Unmodified	_HTNPKWQLVL_					0	0	0		nc|ENSG00000196932|Q6ZUK4-2|TMEM26	nc|ENSG00000196932|Q6ZUK4-2|TMEM26	nc|ENSG00000196932|Q6ZUK4-2|TMEM26	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.346923828125	2	618.348397	1234.68224	-0.1645	-0.00010172	-3.7425	-0.0023141	-3.907	-0.0024159	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.86218	1	9829	9829		32.812	0.061884	1	511870			15090	15187	10392	10401	17374	17374					0.07428785042657182
HTNRKRKAS	9	Unmodified	_HTNRKRKAS_					0	0	0			REV__nc|ENSG00000163939|Q86U86-7|PBRM1	REV__nc|ENSG00000163939|Q86U86-7|PBRM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.31787109375	2	549.317963	1096.62137	-0.54475	-0.00029924	0.016864	9.2634E-06	-0.52789	-0.00028998	549.3179138519522	101.15	1.9875	101.19	100.7	102.69	0.031036					127	47	4	0	0	0	0.7932	1	10823	10823		24.519	0.99649	1	2171100	+		15091	21000	10393	10402	17375	17375					0.0769269278309821
HTNRKRKAS	9	Unmodified	_HTNRKRKAS_					0	0	0			REV__nc|ENSG00000163939|Q86U86-7|PBRM1	REV__nc|ENSG00000163939|Q86U86-7|PBRM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.3173217773438	2	549.317963	1096.62137	3.3171	0.0018221	-3.8331	-0.0021056	-0.51598	-0.00028344	549.3157779565678	101.02	2.3329	100.97	100.53	102.87	-0.052109					129	55	4	0	0	0	0.7932	1	10983	10983		24.519	4.5224	1	1991000	+		15092	21000	10393	10402	17376	17376					0.0769269278309821
HTNRKRKAS	9	Unmodified	_HTNRKRKAS_					0	0	0			REV__nc|ENSG00000163939|Q86U86-7|PBRM1	REV__nc|ENSG00000163939|Q86U86-7|PBRM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.31787109375	2	549.317963	1096.62137	1.2725	0.00069901	-1.8159	-0.00099752	-0.54341	-0.00029851	549.3168832768056	100.86	2.4507	100.91	100.43	102.88	0.046356					139	58	4	0	0	0	0.75725	2	10842	10842;10865		36.447	9.8101	1	1880500	+		15093	21000	10393	10402	17377;17378	17377					0.0769269278309821
HTNRKRKAS	9	Unmodified	_HTNRKRKAS_					0	0	0			REV__nc|ENSG00000163939|Q86U86-7|PBRM1	REV__nc|ENSG00000163939|Q86U86-7|PBRM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3175659179688	2	549.317963	1096.62137	0.85078	0.00046735	-1.4654	-0.00080499	-0.61465	-0.00033764	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.77696	2	10544	10544;10604		31.53	6.1276	1	2023500	+		15094	21000	10393	10402	17379;17380	17379					0.0769269278309821
HTNRKRKAS	9	Unmodified	_HTNRKRKAS_					0	0	0			REV__nc|ENSG00000163939|Q86U86-7|PBRM1	REV__nc|ENSG00000163939|Q86U86-7|PBRM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.318115234375	2	549.317963	1096.62137	-1.4544	-0.00079891	0.85454	0.00046941	-0.59983	-0.0003295	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.78528	1	10543	10543		29.17	6.1276	1	2310400	+		15095	21000	10393	10402	17381	17381					0.0769269278309821
HTNSLITHIK	10	Unmodified	_HTNSLITHIK_					0	0	0			REV__ENSG00000161381|ENST00000315392|PLXDC1	REV__ENSG00000161381|ENST00000315392|PLXDC1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3538208007812	2	582.330205	1162.64586	-0.28422	-0.00016551	4.3977	0.0025609	4.1135	0.0023954	582.8349331490507	103.65	0.97369	103.65	103.38	104.36	0					37	23	3	0	0	0	0.37624	1	10601	10601		36.447	9.7538	1	477350	+		15096	20764	10394	10403	17382	17382					0.07103908145927562
HTNSLITHIK	10	Unmodified	_HTNSLITHIK_					0	0	0			REV__ENSG00000161381|ENST00000315392|PLXDC1	REV__ENSG00000161381|ENST00000315392|PLXDC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3536987304688	2	582.330205	1162.64586	3.1768	0.00185	-1.4995	-0.00087323	1.6773	0.00097674	582.3294090952791	103.55	0.64227	103.51	103.12	103.76	-0.043755					33	15	3	0	0	0	0.37624	1	11378	11378		49.536	32.068	1	521620	+		15097	20764	10394	10403	17383	17383					0.07103908145927562
HTNSLITHIK	10	Unmodified	_HTNSLITHIK_					0	0	0			REV__ENSG00000161381|ENST00000315392|PLXDC1	REV__ENSG00000161381|ENST00000315392|PLXDC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3533325195312	2	582.330205	1162.64586	3.1755	0.0018492	-3.5822	-0.002086	-0.40672	-0.00023684	582.328282951967	104.08	0.39153	104.03	103.93	104.32	-0.043755					9	8	2	0	0	0	0.37624	1	11438	11438		27.047	0	1	89688	+		15098	20764	10394	10403	17384	17384					0.07103908145927562
HTNSLITHIK	10	Unmodified	_HTNSLITHIK_					0	0	0			REV__ENSG00000161381|ENST00000315392|PLXDC1	REV__ENSG00000161381|ENST00000315392|PLXDC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3533325195312	2	582.330205	1162.64586	0.71959	0.00041904	-0.10103	-5.8834E-05	0.61855	0.0003602	582.330161562783	103.34	0.68295	103.53	103.47	104.15	0.18298					30	16	2	0	0	0	0.37624	1	10920	10920		38.754	14.551	1	488290	+		15099	20764	10394	10403	17385	17385					0.07103908145927562
HTNTYAKSVV	10	Unmodified	_HTNTYAKSVV_					0	0	0		nc|ENSG00000008277|Q9P0K1-4|ADAM22;nc|ENSG00000008277|Q9P0K1-3|ADAM22;nc|ENSG00000008277|Q9P0K1-5|ADAM22;nc|ENSG00000008277|Q9P0K1-2|ADAM22;nc|ENSG00000008277|Q9P0K1|ADAM22;ENSG00000008277|ENST00000413139|ADAM22	nc|ENSG00000008277|Q9P0K1-4|ADAM22	nc|ENSG00000008277|Q9P0K1-4|ADAM22	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.34033203125	2	560.293288	1118.57202	-0.41244	-0.00023109	3.6574	0.0020492	3.245	0.0018181	560.2959114763307	102.33	0.17828	102.33	102.21	102.39	0					5	4	2	0	0	0	0.37624	1	10439	10439		51.193	8.7966	1	115210			15100	738	10395	10404	17386	17386					0.017479399836020093
HTNVFKVL	8	Unmodified	_HTNVFKVL_					0	0	0		ENST00000566016.5_1_16:46637844-46655271:-|nuORF;ENSG00000171241|ENST00000303383|SHCBP1	ENST00000566016.5_1_16:46637844-46655271:-|nuORF	ENST00000566016.5_1_16:46637844-46655271:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2777099609375	2	479.279452	956.544351	-0.77651	-0.00037216	-3.5504	-0.0017016	-4.3269	-0.0020738	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.89962	1	8767	8767		38.806	1.7777	1	7040000			15101	6652	10396	10405	17387	17387					0.0643408151404401
HTNVFKVL	8	Unmodified	_HTNVFKVL_					0	0	0		ENST00000566016.5_1_16:46637844-46655271:-|nuORF;ENSG00000171241|ENST00000303383|SHCBP1	ENST00000566016.5_1_16:46637844-46655271:-|nuORF	ENST00000566016.5_1_16:46637844-46655271:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2776184082031	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.87479	2	8393	8393;8405		30.504	3.7075	1	7438100			15102	6652	10396	10405	17388;17389	17388					0.0643408151404401
HTNVFKVL	8	Unmodified	_HTNVFKVL_					0	0	0		ENST00000566016.5_1_16:46637844-46655271:-|nuORF;ENSG00000171241|ENST00000303383|SHCBP1	ENST00000566016.5_1_16:46637844-46655271:-|nuORF	ENST00000566016.5_1_16:46637844-46655271:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2778015136719	2	479.279452	956.544351	-0.95082	-0.00045571	-3.0433	-0.0014586	-3.9941	-0.0019143	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.89962	2	10000	10000;10037		40.573	4.6336	1	6350300			15103	6652	10396	10405	17390;17391	17390					0.0643408151404401
HTNWEGDE	8	Unmodified	_HTNWEGDE_					0	0	0			REV__ENST00000262061.6_1_12:54745315-54745399:+|nuORF	REV__ENST00000262061.6_1_12:54745315-54745399:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3008728027344	2	494.193771	986.372988	2.3078	0.0011405	-3.752	-0.0018542	-1.4442	-0.00071373	494.19233750301237	97.573	0.12414	97.517	97.437	97.561	-0.055542					4	2	2	0	0	0	0.4196	1	10498	10498		37.159	15.199	1	26463	+		15104	24408	10397	10406	17392	17392					-0.12074320315082332
HTPAKDRRAL	10	Unmodified	_HTPAKDRRAL_					0	0	0		ENSG00000112294|ENST00000357578|ALDH5A1;nc|ENSG00000112294|P51649-2|ALDH5A1	ENSG00000112294|ENST00000357578|ALDH5A1	ENSG00000112294|ENST00000357578|ALDH5A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8331298828125	2	582.833446	1163.65234	0.11318	6.5963E-05	-1.4518	-0.00084619	-1.3387	-0.00078022	582.8325626554922	94.252	3.4585	94.298	93.323	96.781	0.046173					208	81	3	0	0	0	0.86471	1	9960	9960		30.318	3.2704	1	743970			15105	2652	10398	10407	17393	17393					0.07705846097337599
HTPAKLNV	8	Unmodified	_HTPAKLNV_					0	0	0			REV__ENSG00000149633|ENST00000279024|KIAA1755	REV__ENSG00000149633|ENST00000279024|KIAA1755	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.25274658203125	2	440.255977	878.497401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.773	1	60.741	60.241	61.241	-0.032509								0	0	0	0.29703	1	5747	5747		37.159	1.9584	1		+		15106	20185	10399	10408	17394	17394					0.05329221962904285
HTPAKLNVKR	10	Unmodified	_HTPAKLNVKR_					0	0	0			REV__ENSG00000149633|ENST00000279024|KIAA1755	REV__ENSG00000149633|ENST00000279024|KIAA1755	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.353759765625	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.86718	1	10801	10801		27.882	0	1	61091000	+		15107	20185	10400	10409	17395	17395					0.11863607136797327
HTPALRLWI	9	Unmodified	_HTPALRLWI_					0	0	0		ENST00000467629.1_1_10:106054804-106059039:+|nuORF;nc|ENSG00000065621|Q9H4Y5-2|GSTO2;nc|ENSG00000065621|Q9H4Y5-3|GSTO2;ENSG00000065621|ENST00000338595|GSTO2	ENST00000467629.1_1_10:106054804-106059039:+|nuORF	ENST00000467629.1_1_10:106054804-106059039:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8296508789062	2	553.827101	1105.63965	1.198	0.00066348	4.1034	0.0022726	5.3014	0.002936	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.72402	1	9098	9098		38.806	0.99462	1	1689700			15108	1137	10401	10410	17396	17396					0.09105434705065818
HTPALRLWI	9	Unmodified	_HTPALRLWI_					0	0	0		ENST00000467629.1_1_10:106054804-106059039:+|nuORF;nc|ENSG00000065621|Q9H4Y5-2|GSTO2;nc|ENSG00000065621|Q9H4Y5-3|GSTO2;ENSG00000065621|ENST00000338595|GSTO2	ENST00000467629.1_1_10:106054804-106059039:+|nuORF	ENST00000467629.1_1_10:106054804-106059039:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.82958984375	2	553.827101	1105.63965	1.287	0.00071279	4.2616	0.0023602	5.5486	0.003073	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.51307	1	9288	9288		51.335	21.018	1	5348100			15109	1137	10401	10410	17397	17397					0.09105434705065818
HTPDVVLDTLE	11	Unmodified	_HTPDVVLDTLE_					0	0	0		ENSG00000266028|ENST00000573034|SRGAP2	ENSG00000266028|ENST00000573034|SRGAP2	ENSG00000266028|ENST00000573034|SRGAP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.3726196289062	2	619.816793	1237.61903	1.9915	0.0012344	1.5684	0.0009721	3.5599	0.0022065	620.3193276961538	101.5	0.26358	101.78	101.71	101.97	0.28187					10	6	2	0	0	0	0.17387	1	12313	12313		45.972	27.71	1	174600			15110	8949	10402	10411	17398	17398					0.009727547441116258
HTPIIVMITNI	11	Unmodified	_HTPIIVMITNI_					0	0	0		nc|ENSG00000110786|P54829-2|PTPN5;nc|ENSG00000110786|P54829-3|PTPN5;ENSG00000110786|ENST00000358540|PTPN5	nc|ENSG00000110786|P54829-2|PTPN5	nc|ENSG00000110786|P54829-2|PTPN5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3795166015625	2	626.360116	1250.70568	-0.23142	-0.00014495	-1.6911	-0.0010593	-1.9226	-0.0012042	626.3586526741167	106.18	0.59264	106.16	106.01	106.61	-0.025146					17	13	2	0	0	0	0.17289	1	11523	11523		18.262	4.808	1	103420			15111	2542	10403	10412	17399	17399					0.0903546276497309
HTPKLEHLD	9	Unmodified	_HTPKLEHLD_					0	0	0		nc|ENSG00000234616|O75564|JRK;ENSG00000234616|ENST00000612905|JRK	nc|ENSG00000234616|O75564|JRK	nc|ENSG00000234616|O75564|JRK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2470092773438	2	545.288005	1088.56146	1.1955	0.00065189	-0.90431	-0.00049311	0.29119	0.00015878	545.28736260731	27.499	0.55393	27.245	26.9	27.454	-0.25465					19	12	3	0	0	0	0.20789	1	1591	1591		35.618	2.8059	1	214070			15112	8745	10404	10413	17400	17400					0.020719573291671622
HTPKLEIKVTP	11	Unmodified	_HTPKLEIKVTP_					0	0	0		nc|ENSG00000012124|P20273-4|CD22;nc|ENSG00000012124|P20273-3|CD22;ENSG00000012124|ENST00000085219|CD22;nc|ENSG00000012124|P20273-5|CD22	nc|ENSG00000012124|P20273-4|CD22	nc|ENSG00000012124|P20273-4|CD22	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	631.878662109375	2	631.876988	1261.73942	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.57	1	68.698	68.198	69.198	0.12838								0	0	0	0.56276	1	6178	6178		59.931	28.401	1				15113	797	10405	10414	17401	17401					0.11902207528351028
HTPLHLLL	8	Unmodified	_HTPLHLLL_					0	0	0		ENST00000589852.5_1_19:16301825-16301957:+|nuORF	ENST00000589852.5_1_19:16301825-16301957:+|nuORF	ENST00000589852.5_1_19:16301825-16301957:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28839111328125	2	472.28982	942.565087	-1.7052	-0.00080535	-2.1722	-0.0010259	-3.8774	-0.0018313	472.2887688366916	99.113	1.9296	99.299	98.808	100.74	0.18582					95	44	3	0	0	0	0.83466	1	10342	10342		23.037	1.0768	1	583920			15114	14247	10406	10415	17402	17402					0.09150671893723938
HTPLHMAALL	10	Unmodified	_HTPLHMAALL_					0	0	0		ENSG00000174165|ENST00000310442|ZDHHC24	ENSG00000174165|ENST00000310442|ZDHHC24	ENSG00000174165|ENST00000310442|ZDHHC24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3057861328125	2	552.305144	1102.59573	-1.4446	-0.00079788	3.8767	0.0021411	2.432	0.0013432	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.84112	1	9457	9457		37.159	4.3467	1	1677300			15115	6912	10407	10416	17403	17403					0.04854082216434108
HTPLLRSPGR	10	Unmodified	_HTPLLRSPGR_					0	0	0		ENST00000606277.1_1_1:41157297-41157681:-|nuORF	ENST00000606277.1_1_1:41157297-41157681:-|nuORF	ENST00000606277.1_1_1:41157297-41157681:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	566.83984375	2	567.330539	1132.64652	-0.39813	-0.00022587	1.0675	0.00060565	0.6694	0.00037977	567.3312674011634	101.38	1.685	101.38	99.931	101.62	0					67	39	2	0	0	0	0.37624	1	10214	10214		12.812	0	1	90551			15116	14445	10408	10417	17404	17404					0.0855074758567298
HTPNHRGIN	9	Unmodified	_HTPNHRGIN_					0	0	0		nc|ENSG00000065413|Q8N8A2-3|ANKRD44	nc|ENSG00000065413|Q8N8A2-3|ANKRD44	nc|ENSG00000065413|Q8N8A2-3|ANKRD44	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.267939	1044.52132	0.7119	0.00037252	1.4195	0.00074278	2.1314	0.0011153	523.7715775869036	88.195	0.2075	88.346	88.158	88.365	0.15055					7	4	2	0	0	0	0.20789	1	8750	8750		35.618	16.515	1	37606			15117	14764	10409	10418	17405	17405					0.0008445544929145399
HTPPLPELLS	10	Unmodified	_HTPPLPELLS_					0	0	0			REV__ENST00000538010.5_1_12:122499282-122499603:+|nuORF	REV__ENST00000538010.5_1_12:122499282-122499603:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.305908203125	2	552.308406	1102.60226	0.26261	0.00014504	-3.8233	-0.0021116	-3.5607	-0.0019666	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.85934	1	9458	9458		35.618	1.4457	1	1950800	+		15118	28430	10410	10419	17406	17406					0.055062986488110255
HTPRKHHQHHH	11	Unmodified	_HTPRKHHQHHH_					0	0	0		ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF	ENSG00000147140|ENST00000276079|NONO	ENSG00000147140|ENST00000276079|NONO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.5788879394531	3	484.58032	1450.71913	0.066395	3.2174E-05	-0.19243	-9.3249E-05	-0.12604	-6.1076E-05	484.58017028025535	15.362	0.34504	15.42	15.309	15.654	0.057872					30	12	4	0	0	0	0.68431	1	19	19		34.087	7.3368	1	208110			15119	4885	10411	10420	17407	17407					0.011798944317888527
HTPRKHHQHHH	11	Unmodified	_HTPRKHHQHHH_					0	0	0		ENSG00000147140|ENST00000276079|NONO;ENST00000486613.6_1_X:70504267-70513876:+|nuORF	ENSG00000147140|ENST00000276079|NONO	ENSG00000147140|ENST00000276079|NONO	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	484.58032	1450.71913	-0.87366	-0.00042336	0.24909	0.0001207	-0.62456	-0.00030265	484.5805983308426	15.119	0.30179	15.168	15.041	15.343	0.049079	-0.12627	0.00083041	NaN	34.087	32	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100720			15120	4885	10411	10420							0.011798944317888527
HTPRRPVR	8	Unmodified	_HTPRRPVR_					0	0	0			REV__ENST00000379339.5_2_1:1019401-1019662:-|nuORF	REV__ENST00000379339.5_2_1:1019401-1019662:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8037109375	2	509.804491	1017.59443	0.22319	0.00011378	-1.7402	-0.00088717	-1.517	-0.00077338	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.85277	1	8784	8784		25.45	3.4903	1	3453000	+		15121	25915	10412	10421	17408	17408					0.08633628962559214
HTPTPVSLF	9	Unmodified	_HTPTPVSLF_					0	0	0		ENSG00000183034|ENST00000331427|OTOP2	ENSG00000183034|ENST00000331427|OTOP2	ENSG00000183034|ENST00000331427|OTOP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.74755859375	2	499.768917	997.523281	-0.8505	-0.00042506	1.3277	0.00066354	0.47719	0.00023849	499.7694772237851	74.809	0.61784	75.201	74.952	75.57	0.39111					28	14	2	0	0	0	0.17384	1	8443	8443		82.305	24.494	1	262370			15122	7495	10413	10422	17409	17409					0.024420714145207967
HTPVGLCKF	9	Unmodified	_HTPVGLCKF_					0	0	0			REV__ENST00000437056.5_1_2:179318136-179318400:+|nuORF	REV__ENST00000437056.5_1_2:179318136-179318400:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.29034423828125	2	501.265487	1000.51642	-0.50206	-0.00025167	3.5442	0.0017766	3.0422	0.0015249	501.7701764411697	86.296	0.80399	86.49	86.258	87.062	0.19379					43	18	3	0	0	0	0.20789	1	8548	8548		23.042	0	1	97516	+		15123	26700	10414	10423	17410	17410					0.016184352622985898
HTPVTSTRVSA	11	Unmodified	_HTPVTSTRVSA_					0	0	0		chr10:5773941-5783324|14|91.93|0.56|7.35|-|0|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|3	chr10:5773941-5783324|14|91.93|0.56|7.35|-|0|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|3	chr10:5773941-5783324|14|91.93|0.56|7.35|-|0|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.8081665039062	2	578.309469	1154.60439	4.9404	0.0028571	-3.1177	-0.001803	1.8227	0.0010541	578.3075291359042	111.31	0.34521	111.36	111.12	111.46	0.049095					20	13	2	0	0	0	0.72106	1	13493	13493		28.081	2.5074	1	64741			15124	75	10415	10424	17411	17411					0.03326727386638595
HTQDQEPRH	9	Unmodified	_HTQDQEPRH_					0	0	0		ENST00000279263.11_1_11:64883552-64883684:+|nuORF	ENST00000279263.11_1_11:64883552-64883684:+|nuORF	ENST00000279263.11_1_11:64883552-64883684:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.356201171875	2	574.265593	1146.51663	2.7444	0.001576	0.022813	1.3101E-05	2.7672	0.0015891	574.2655359933625	100.21	6.5299	100.16	96.417	102.95	-0.052116					215	153	3	0	0	0	0.20789	1	10798	10798		54.776	7.119	1	216220			15125	9615	10416	10425	17412	17412					-0.050764734841322934
HTQGPGAGT	9	Unmodified	_HTQGPGAGT_					0	0	0		ENST00000311234.8_1_13:52026748-52027018:-|nuORF	ENST00000311234.8_1_13:52026748-52027018:-|nuORF	ENST00000311234.8_1_13:52026748-52027018:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.1940612792969	2	413.196116	824.37768	-1.6019	-0.00066191	-4.2995	-0.0017765	-5.9014	-0.0024384	413.19424248280797	78.75	3.0447	78.844	78.417	81.462	0.0942					181	92	2	0	0	0	0.69624	1	7391	7391		40.778	1.7567	1	856750			15126	9924	10417	10426	17413	17413					-0.041533913816579116
HTQILRRVP	9	Unmodified	_HTQILRRVP_					0	0	0		ENSG00000110046|ENST00000377264|ATG2A;nc|ENSG00000110046|Q2TAZ0-3|ATG2A	ENSG00000110046|ENST00000377264|ATG2A	ENSG00000110046|ENST00000377264|ATG2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.340087890625	2	560.340907	1118.66726	-1.1289	-0.00063255	-0.073505	-4.1188E-05	-1.2024	-0.00067374	560.3407299796369	89.624	3.285	89.693	87.185	90.47	0.068703					185	76	4	0	0	0	0.76255	1	9137	9137		35.618	0.46626	1	1038600			15127	2503	10418	10427	17414	17414					0.11267337965318802
HTQILRRVP	9	Unmodified	_HTQILRRVP_					0	0	0		ENSG00000110046|ENST00000377264|ATG2A;nc|ENSG00000110046|Q2TAZ0-3|ATG2A	ENSG00000110046|ENST00000377264|ATG2A	ENSG00000110046|ENST00000377264|ATG2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3403930664062	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.7932	1	11048	11048		26.693	0	1	81463000			15128	2503	10418	10427	17415	17415					0.11267337965318802
HTQLTHRKL	9	Unmodified	_HTQLTHRKL_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3299560546875	2	567.330539	1132.64652	1.5887	0.00090129	-2.6625	-0.0015105	-1.0739	-0.00060923	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.77244	1	9377	9377		32.812	0	1	5459400	+		15129	18022	10419	10428	17416	17416					0.0855074758567298
HTQPYTIYT	9	Unmodified	_HTQPYTIYT_					0	0	0		nc|ENSG00000088387|Q9BZ29-3|DOCK9;nc|ENSG00000088387|Q9BZ29-5|DOCK9;nc|ENSG00000088387|Q9BZ29|DOCK9;ENSG00000088387|ENST00000682017|DOCK9;nc|ENSG00000088387|Q9BZ29-4|DOCK9;nc|ENSG00000088387|Q9BZ29-6|DOCK9	nc|ENSG00000088387|Q9BZ29-3|DOCK9	nc|ENSG00000088387|Q9BZ29-3|DOCK9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.8460083007812	2	562.274564	1122.53457	1.9053	0.0010713	2.5948	0.001459	4.5001	0.0025303	562.2761209563039	96.976	0.43949	97.381	97.178	97.617	0.40498					16	10	2	0	0	0	0.20789	1	11612	11612		34.173	5.0025	1	109230			15130	1589	10420	10429	17417	17417					-0.021791512819845593
HTQPYTIYT	9	Unmodified	_HTQPYTIYT_					0	0	0		nc|ENSG00000088387|Q9BZ29-3|DOCK9;nc|ENSG00000088387|Q9BZ29-5|DOCK9;nc|ENSG00000088387|Q9BZ29|DOCK9;ENSG00000088387|ENST00000682017|DOCK9;nc|ENSG00000088387|Q9BZ29-4|DOCK9;nc|ENSG00000088387|Q9BZ29-6|DOCK9	nc|ENSG00000088387|Q9BZ29-3|DOCK9	nc|ENSG00000088387|Q9BZ29-3|DOCK9	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	562.274564	1122.53457	1.3191	0.00074168	2.9783	0.0016746	4.2974	0.0024163	562.7773407400705	97.086	0.44058	97.477	97.282	97.722	0.39065	0.047791	0.00023028	NaN	34.173	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90607			15131	1589	10420	10429							-0.021791512819845593
HTQTFLSLL	9	Unmodified	_HTQTFLSLL_					0	0	0			REV__nc|ENSG00000135905|Q96BY6-3|DOCK10	REV__nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2931518554688	2	530.295299	1058.57605	-0.73575	-0.00039016	-2.8196	-0.0014952	-3.5553	-0.0018854	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.58668	1	8799	8799		47.657	13.485	1	1390700	+		15132	19264	10421	10430	17418	17418					0.049100294773325004
HTRAHPPGVRR	11	Unmodified	_HTRAHPPGVRR_					0	0	0			REV__ENST00000562648.2_1_16:743493-744282:-|nuORF	REV__ENST00000562648.2_1_16:743493-744282:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.3648071289062	2	642.363236	1282.71192	1.6044	0.0010306	-2.8076	-0.0018035	-1.2032	-0.00077288	642.3622346823327	110.04	1.0264	110.16	109.72	110.75	0.1229					129	37	5	0	0	0	0.62614	1	11864	11864		41.427	1.3684	1	10986000	+		15133	28805	10422	10431	17419	17419					0.08187161831347112
HTRAIHLL	8	Unmodified	_HTRAIHLL_					0	0	0			REV__nc|ENSG00000137145|Q5VZ89-5|DENND4C	REV__nc|ENSG00000137145|Q5VZ89-5|DENND4C	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.7913818359375	2	480.790518	959.566484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.884	1	21.826	21.326	22.326	-0.057203								0	0	0	0.30252	1	639	639		19.36	0	1		+		15134	19364	10423	10432	17420	17420					0.08508305982479669
HTRAVKLIETD	11	Unmodified	_HTRAVKLIETD_					0	0	0			REV__ENSG00000112584|ENST00000476287|FAM120B	REV__ENSG00000112584|ENST00000476287|FAM120B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.861328125	2	641.859326	1281.7041	-0.052066	-3.3419E-05	-0.555	-0.00035623	-0.60707	-0.00038965	641.8586484820704	118.5	0.48003	118.42	118.21	118.69	-0.07531					44	17	3	0	0	0	0.7144	1	12698	12698		29.17	0	1	700550	+		15135	17955	10424	10433	17421	17421					0.07451545000549231
HTREHMQLN	9	Unmodified	_HTREHMQLN_					0	0	0			REV__ENSG00000196757|ENST00000254321|ZNF700	REV__ENSG00000196757|ENST00000254321|ZNF700	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.8148803710938	2	583.280189	1164.54582	-0.43818	-0.00025558	3.2936	0.0019211	2.8554	0.0016655	583.2810332330771	75.198	0.60086	75.763	75.499	76.1	0.56458					28	14	3	0	0	0	0.20789	1	8498	8498		42.864	10.909	1	369790	+		15136	23169	10425	10434	17422	17422					-0.029866524595036026
HTRESIVLNS	10	Unmodified	_HTRESIVLNS_					0	0	0			REV__ENSG00000111799|ENST00000322507|COL12A1	REV__ENSG00000111799|ENST00000322507|COL12A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.310302734375	2	578.309469	1154.60439	-0.30541	-0.00017662	2.2173	0.0012823	1.9119	0.0011057	578.3105993918314	110.37	1.6265	110.37	110.02	111.65	0					155	51	5	0	0	0	0.8651	1	11519	11519		25.574	3.6142	1	2787700	+		15137	17895	10426	10435	17423	17423					0.03326727386638595
HTRFWRRRLRR	11	Unmodified	_HTRFWRRRLRR_					0	0	0			REV__ENST00000574110.5_1_19:30433210-30433438:+|nuORF	REV__ENST00000574110.5_1_19:30433210-30433438:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.3247680664062	3	547.325814	1638.95561	-0.10208	-5.5874E-05	-0.9969	-0.00054563	-1.099	-0.0006015	547.3252040166117	17.862	0.70785	17.379	16.851	17.559	-0.48256					40	15	3	0	0	0	0.7896	2	302	302;314		13.508	4.2961	1	209580	+		15138	28967	10427	10436	17424;17425	17424					0.16169245996093196
HTRFWRRRLRR	11	Unmodified	_HTRFWRRRLRR_					0	0	0			REV__ENST00000574110.5_1_19:30433210-30433438:+|nuORF	REV__ENST00000574110.5_1_19:30433210-30433438:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	547.325814	1638.95561	-0.10208	-5.5874E-05	-0.9969	-0.00054563	-1.099	-0.0006015	547.3252040166117	17.862	0.70785	17.379	16.851	17.559	-0.48256	-0.012959	0.00011594	NaN	13.508	40	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	209580	+		15139	28967	10427	10436							0.16169245996093196
HTRFWRRRLRR	11	Unmodified	_HTRFWRRRLRR_					0	0	0			REV__ENST00000574110.5_1_19:30433210-30433438:+|nuORF	REV__ENST00000574110.5_1_19:30433210-30433438:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	547.325814	1638.95561	0.079103	4.3295E-05	-1.0988	-0.00060139	-1.0197	-0.00055809	547.325241538873	18.027	0.62349	17.405	16.962	17.585	-0.62141	0.012959	-5.132E-05	NaN	13.508	30	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	281270	+		15140	28967	10427	10436							0.16169245996093196
HTRHLGAAQL	10	Unmodified	_HTRHLGAAQL_					0	0	0		ENST00000397061.3_1_19:33183408-33183504:+|nuORF	ENST00000397061.3_1_19:33183408-33183504:+|nuORF	ENST00000397061.3_1_19:33183408-33183504:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3060302734375	2	552.307064	1102.59957	-1.4446	-0.00079788	0.40047	0.00022118	-1.0442	-0.00057669	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.8608	1	9420	9420		34.173	0	1	1677300			15141	11135	10428	10437	17426	17426					0.052378880345031575
HTRITAASA	9	Unmodified	_HTRITAASA_					0	0	0		nc|ENSG00000164638|Q7RTT9-2|SLC29A4	nc|ENSG00000164638|Q7RTT9-2|SLC29A4	nc|ENSG00000164638|Q7RTT9-2|SLC29A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25408935546875	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.71772	1	8100	8100		39.253	2.0937	1	946850			15142	15063	10429	10438	17427	17427					0.02719132469167107
HTRITAASA	9	Unmodified	_HTRITAASA_					0	0	0		nc|ENSG00000164638|Q7RTT9-2|SLC29A4	nc|ENSG00000164638|Q7RTT9-2|SLC29A4	nc|ENSG00000164638|Q7RTT9-2|SLC29A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2538146972656	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.6204	2	8488	7985;8488		45.972	4.7309	1	1449300			15143	15063	10429	10438	17428;17429	17429					0.02719132469167107
HTRITAASA	9	Unmodified	_HTRITAASA_					0	0	0		nc|ENSG00000164638|Q7RTT9-2|SLC29A4	nc|ENSG00000164638|Q7RTT9-2|SLC29A4	nc|ENSG00000164638|Q7RTT9-2|SLC29A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25555419921875	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.67345	2	8366	8292;8366		42.396	5.237	1	1603800			15144	15063	10429	10438	17430;17431	17431					0.02719132469167107
HTRITAASA	9	Unmodified	_HTRITAASA_					0	0	0		nc|ENSG00000164638|Q7RTT9-2|SLC29A4	nc|ENSG00000164638|Q7RTT9-2|SLC29A4	nc|ENSG00000164638|Q7RTT9-2|SLC29A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25347900390625	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.77244	1	8338	8338		32.812	3.6424	1	1482000			15145	15063	10429	10438	17432	17432					0.02719132469167107
HTRITAASA	9	Unmodified	_HTRITAASA_					0	0	0		nc|ENSG00000164638|Q7RTT9-2|SLC29A4	nc|ENSG00000164638|Q7RTT9-2|SLC29A4	nc|ENSG00000164638|Q7RTT9-2|SLC29A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.25408935546875	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.76764	1	8233	8233		34.173	1.3601	1	1324500			15146	15063	10429	10438	17433	17433					0.02719132469167107
HTRKHKSLI	9	Unmodified	_HTRKHKSLI_					0	0	0			REV__nc|ENSG00000256771|O75346-2|ZNF253	REV__nc|ENSG00000256771|O75346-2|ZNF253	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.33984375	2	560.340907	1118.66726	0.86148	0.00048272	-2.5313	-0.0014184	-1.6698	-0.00093568	560.3394907203773	113.88	0.12546	113.94	113.88	114.01	0.063232					9	4	3	0	0	0	0.78983	1	12197	12197		27.882	5.9224	1	3266200	+		15147	23911	10430	10439	17434	17434					0.11267337965318802
HTRKHKSLI	9	Unmodified	_HTRKHKSLI_					0	0	0			REV__nc|ENSG00000256771|O75346-2|ZNF253	REV__nc|ENSG00000256771|O75346-2|ZNF253	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	560.340907	1118.66726	0.86148	0.00048272	-2.5313	-0.0014184	-1.6698	-0.00093568	560.3394907203773	113.88	0.12546	113.94	113.88	114.01	0.063232	-0.074416	0.0010916	NaN	27.882	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3266200	+		15148	23911	10430	10439							0.11267337965318802
HTRLFSIA	8	Unmodified	_HTRLFSIA_					0	0	0			REV__ENST00000467888.5_1_2:46525050-46574567:+|nuORF	REV__ENST00000467888.5_1_2:46525050-46574567:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7673645019531	2	472.769252	943.52395	-0.10807	-5.1094E-05	-4.0843	-0.0019309	-4.1924	-0.001982	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.92457	1	8316	8316		47.916	14.4	1	501240	+		15149	18170	10431	10440	17435	17435					0.04992910854218735
HTRLGPGAKQL	11	Unmodified	_HTRLGPGAKQL_					0	0	0			REV__ENSG00000143303|ENST00000368216|METTL25B	REV__ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3431396484375	2	589.343646	1176.67274	-0.40075	-0.00023618	-0.79332	-0.00046754	-1.1941	-0.00070372	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.69248	2	9085	9002;9085		32.751	2.2469	1	4112500	+		15150	19788	10432	10441	17436;17437	17437					0.09147016757151505
HTRLGPGAKQL	11	Unmodified	_HTRLGPGAKQL_					0	0	0			REV__ENSG00000143303|ENST00000368216|METTL25B	REV__ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.34326171875	2	589.343646	1176.67274	-0.36759	-0.00021664	-0.80413	-0.00047391	-1.1717	-0.00069055	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.72739	1	9358	9358		27.047	3.5246	1	11103000	+		15151	19788	10432	10441	17438	17438					0.09147016757151505
HTRLGPGAKQL	11	Unmodified	_HTRLGPGAKQL_					0	0	0			REV__ENSG00000143303|ENST00000368216|METTL25B	REV__ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3428344726562	2	589.343646	1176.67274	-0.67475	-0.00039766	-0.80911	-0.00047684	-1.4839	-0.0008745	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.62614	1	9519	9519		41.427	16.301	1	5429300	+		15152	19788	10432	10441	17439	17439					0.09147016757151505
HTRLGPGAKQL	11	Unmodified	_HTRLGPGAKQL_					0	0	0			REV__ENSG00000143303|ENST00000368216|METTL25B	REV__ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3426513671875	2	589.343646	1176.67274	-0.6745	-0.00039751	-0.65118	-0.00038377	-1.3257	-0.00078128	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.70737	2	9795	9795;9879		30.318	2.4771	1	16185000	+		15153	19788	10432	10441	17440;17441	17440					0.09147016757151505
HTRLGPGAKQL	11	Unmodified	_HTRLGPGAKQL_					0	0	0			REV__ENSG00000143303|ENST00000368216|METTL25B	REV__ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3427734375	2	589.343646	1176.67274	2.472	0.0014569	-3.7901	-0.0022337	-1.3181	-0.00077681	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.69995	2	10048	9930;10048		31.53	3.4483	1	16740000	+		15154	19788	10432	10441	17442;17443	17443					0.09147016757151505
HTRLGPGAKQL	11	Unmodified	_HTRLGPGAKQL_					0	0	0			REV__ENSG00000143303|ENST00000368216|METTL25B	REV__ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3427124023438	2	589.343646	1176.67274	-0.65315	-0.00038493	-0.88363	-0.00052076	-1.5368	-0.00090569	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.66929	1	9612	9612		36.447	3.6343	1	5584100	+		15155	19788	10432	10441	17444	17444					0.09147016757151505
HTRLGPGAKQL	11	Unmodified	_HTRLGPGAKQL_					0	0	0			REV__ENSG00000143303|ENST00000368216|METTL25B	REV__ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3424682617188	2	589.343646	1176.67274	-0.65438	-0.00038565	-0.61013	-0.00035958	-1.2645	-0.00074523	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.70737	2	9805	9805;9982		30.318	5.7985	1	16804000	+		15156	19788	10432	10441	17445;17446	17445					0.09147016757151505
HTRLGPGAKQL	11	Unmodified	_HTRLGPGAKQL_					0	0	0			REV__ENSG00000143303|ENST00000368216|METTL25B	REV__ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3424072265625	2	589.343646	1176.67274	0.81285	0.00047905	-2.3819	-0.0014037	-1.569	-0.00092468	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.7144	1	9332	9332		29.17	2.4771	1	6450100	+		15157	19788	10432	10441	17447	17447					0.09147016757151505
HTRLGPGAKQL	11	Unmodified	_HTRLGPGAKQL_					0	0	0			REV__ENSG00000143303|ENST00000368216|METTL25B	REV__ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3428955078125	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.72739	1	9614	9614		27.047	0.25122	1	17904000	+		15158	19788	10432	10441	17448	17448					0.09147016757151505
HTRLHNRV	8	Unmodified	_HTRLHNRV_					0	0	0			REV__ENSG00000167625|ENST00000301215|ZNF526;REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	REV__ENSG00000167625|ENST00000301215|ZNF526	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.79345703125	2	516.794124	1031.57369	-0.87095	-0.0004501	-0.7863	-0.00040636	-1.6573	-0.00085646	516.7937641781077	86.407	2.8089	86.407	84.831	87.64	0					132	64	4	0	0	0	0.884	1	8213	8213		33.516	0	1	210980	+		15159	21407;29761	10433	10442	17449	17449					0.05917038582879286
HTRLHNRV	8	Unmodified	_HTRLHNRV_					0	0	0			REV__ENSG00000167625|ENST00000301215|ZNF526;REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	REV__ENSG00000167625|ENST00000301215|ZNF526	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7935180664062	2	516.794124	1031.57369	-1.5587	-0.00080555	0.2539	0.00013121	-1.3048	-0.00067434	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.91005	1	8657	8657		42.474	7.2737	1	755180	+		15160	21407;29761	10433	10442	17450	17450					0.05917038582879286
HTRLLFAS	8	Unmodified	_HTRLLFAS_					0	0	0			REV__ENST00000292377.3_1_7:99774686-99774926:-|nuORF	REV__ENST00000292377.3_1_7:99774686-99774926:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7672119140625	2	472.769252	943.52395	-0.10807	-5.1094E-05	-4.0843	-0.0019309	-4.1924	-0.001982	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.91005	3	8304	8304;8381;8461		53.351	12.779	1	501240	+		15161	24675	10434	10443	17451;17452;17453	17451					0.04992910854230104
HTRLLFAS	8	Unmodified	_HTRLLFAS_					0	0	0			REV__ENST00000292377.3_1_7:99774686-99774926:-|nuORF	REV__ENST00000292377.3_1_7:99774686-99774926:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7673645019531	2	472.769252	943.52395	-0.93003	-0.00043969	-3.4036	-0.0016091	-4.3336	-0.0020488	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.87922	1	8190	8190		31.955	4.0726	1	526610	+		15162	24675	10434	10443	17454	17454					0.04992910854230104
HTRLLFAS	8	Unmodified	_HTRLLFAS_					0	0	0			REV__ENST00000292377.3_1_7:99774686-99774926:-|nuORF	REV__ENST00000292377.3_1_7:99774686-99774926:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.76727294921875	2	472.769252	943.52395	-1.568	-0.00074129	-2.6998	-0.0012764	-4.2678	-0.0020177	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.90523	1	8068	8068		40.778	1.972	1	404330	+		15163	24675	10434	10443	17455	17455					0.04992910854230104
HTRPIGLREV	10	Unmodified	_HTRPIGLREV_					0	0	0			REV__ENST00000452032.6_1_19:10418966-10420344:-|nuORF	REV__ENST00000452032.6_1_19:10418966-10420344:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3438720703125	2	589.343646	1176.67274	-0.40075	-0.00023618	-0.79332	-0.00046754	-1.1941	-0.00070372	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.85981	1	8955	8955		35.152	2.3396	1	4112500	+		15164	26891	10435	10444	17456	17456					0.09147016757128767
HTRPLLIVVM	10	Oxidation (M)	_HTRPLLIVVM(Oxidation (M))_		HTRPLLIVVM(1)		HTRPLLIVVM(41)	0	0	1			REV__ENST00000509943.1_1_17:48286340-48286481:+|nuORF	REV__ENST00000509943.1_1_17:48286340-48286481:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8567504882812	2	597.855001	1193.69545	-0.3553	-0.00021242	2.7776	0.0016606	2.4223	0.0014482	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.77314	1	9075	9075		40.778	6.6056	1	1224100	+		15165	27943	10436	10445	17457	17457		415			0.10634899830392897
HTRPLLIVVM	10	Oxidation (M)	_HTRPLLIVVM(Oxidation (M))_		HTRPLLIVVM(1)		HTRPLLIVVM(48)	0	0	1			REV__ENST00000509943.1_1_17:48286340-48286481:+|nuORF	REV__ENST00000509943.1_1_17:48286340-48286481:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8560791015625	2	597.855001	1193.69545	-0.56225	-0.00033615	2.6789	0.0016016	2.1167	0.0012655	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.64457	1	9635	9635		47.657	8.4045	1	2042000	+		15166	27943	10436	10445	17458	17458		415			0.10634899830392897
HTRPLLIVVM	10	Oxidation (M)	_HTRPLLIVVM(Oxidation (M))_		HTRPLLIVVM(1)		HTRPLLIVVM(48)	0	0	1			REV__ENST00000509943.1_1_17:48286340-48286481:+|nuORF	REV__ENST00000509943.1_1_17:48286340-48286481:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8555908203125	2	597.855001	1193.69545	0.8216	0.0004912	1.2098	0.00072326	2.0314	0.0012145	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.64457	1	9423	9423		47.657	7.5992	1	2486400	+		15167	27943	10436	10445	17459	17459		415			0.10634899830392897
HTRPLLIVVM	10	Oxidation (M)	_HTRPLLIVVM(Oxidation (M))_		HTRPLLIVVM(1)		HTRPLLIVVM(41)	0	0	1			REV__ENST00000509943.1_1_17:48286340-48286481:+|nuORF	REV__ENST00000509943.1_1_17:48286340-48286481:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8560791015625	2	597.855001	1193.69545	-1.2963	-0.00077498	3.3616	0.0020097	2.0653	0.0012348	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.77314	1	9403	9403		40.778	7.9657	1	2401200	+		15168	27943	10436	10445	17460	17460		415			0.10634899830392897
HTRPLPLP	8	Unmodified	_HTRPLPLP_					0	0	0			REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.777587890625	2	465.779619	929.544686	-1.5315	-0.00071332	-2.8632	-0.0013336	-4.3947	-0.0020469	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.86288	1	7819	7819		26.796	2.5934	1	991370	+		15169	26054	10437	10446	17461	17461					0.07709501233898663
HTRQHKILT	9	Unmodified	_HTRQHKILT_					0	0	0			REV__nc|ENSG00000251192|Q2M3X9-2|ZNF674;REV__ENSG00000102870|ENST00000262525|ZNF629;REV__ENSG00000196391|ENST00000354377|ZNF774	REV__ENSG00000102870|ENST00000262525|ZNF629	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3301391601562	2	567.330539	1132.64652	-0.50942	-0.00028901	0.5149	0.00029212	0.0054817	3.1099E-06	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.7932	1	10751	10751		18.324	0	1	5685000	+		15170	17364;23872;23123	10438	10447	17462	17462					0.0855074758567298
HTRQHNTLS	9	Unmodified	_HTRQHNTLS_					0	0	0			REV__ENSG00000234284|ENST00000444149|ZNF879	REV__ENSG00000234284|ENST00000444149|ZNF879	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.2797241210938	2	547.278503	1092.54245	0.42612	0.0002332	1.781	0.00097473	2.2072	0.0012079	547.2793249693905	26.828	0.98989	26.79	26.483	27.473	-0.038525					50	23	3	0	0	0	0.67345	1	1232	1232		42.396	4.5846	1	181010	+		15171	23777	10439	10448	17463	17463					-0.00011579241868275858
HTRRHIVL	8	Unmodified	_HTRRHIVL_					0	0	0			REV__ENSG00000198393|ENST00000328654|ZNF26	REV__ENSG00000198393|ENST00000328654|ZNF26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3135375976562	2	516.314692	1030.61483	-1.5618	-0.0008064	0.29405	0.00015182	-1.2678	-0.00065458	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.86288	1	10690	10690		26.796	2.5934	1	1268100	+		15172	23322	10440	10449	17464	17464					0.10074799622361752
HTRSILPSGLL	11	Unmodified	_HTRSILPSGLL_					0	0	0		ENST00000503131.1_2_17:48206901-48207210:-|nuORF	ENST00000503131.1_2_17:48206901-48207210:-|nuORF	ENST00000503131.1_2_17:48206901-48207210:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8563232421875	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.69995	1	9490	9490		31.53	1.2121	1	18777000			15173	12875	10441	10450	17465	17465					0.10416767697097384
HTRTAQFD	8	Unmodified	_HTRTAQFD_					0	0	0		ENSG00000100714|ENST00000652337|MTHFD1;ENST00000554677.1_1_14:64902319-64908231:+|nuORF;ENST00000555252.5_1_14:64855058-64907131:+|nuORF	ENSG00000100714|ENST00000652337|MTHFD1	ENSG00000100714|ENST00000652337|MTHFD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906799316406	2	488.235773	974.456993	-0.08495	-4.1476E-05	-1.5846	-0.00077367	-1.6696	-0.00081515	488.2365486237891	84.793	0.13038	84.86	84.767	84.897	0.067169					4	2	2	0	0	0	0.4196	1	8471	8471		44.117	30.663	1	15491			15174	1861	10442	10451	17466	17466					-0.03125744427518384
HTRTPPIIHR	10	Unmodified	_HTRTPPIIHR_					0	0	0		nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000165238|Q9Y3S1-3|WNK2;ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2;nc|ENSG00000196632|Q9BYP7-3|WNK3;nc|ENSG00000196632|Q9BYP7-4|WNK3;nc|ENSG00000196632|Q9BYP7-2|WNK3;ENSG00000196632|ENST00000354646|WNK3	nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000196632|Q9BYP7-3|WNK3	nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.9073791503906	3	409.907151	1226.69962	0.99418	0.00040752	-0.90055	-0.00036914	0.093635	3.8382E-05	409.90676287707765	23.516	0.98145	22.942	22.409	23.391	-0.57415					50	23	3	0	0	0	0.24002	1	1058	1058		79.489	40.735	1	382810			15175	14760;8083	10443	10452	17467	17467					0.09534125368327295
HTRTPSAKRGV	11	Unmodified	_HTRTPSAKRGV_					0	0	0			REV__ENSG00000179270|ENST00000331664|PCARE	REV__ENSG00000179270|ENST00000331664|PCARE	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.84619140625	2	605.344178	1208.6738	2.5011	0.001514	3.2557	0.0019708	5.7569	0.0034849	605.3460934058024	96.464	3.1685	96.408	94.475	97.644	-0.056389					143	74	3	0	0	0	0.17502	1	10340	10340		29.17	10.908	1	266670	+		15176	22327	10444	10453	17468	17468					0.07781231126023158
HTRVGVASL	9	Unmodified	_HTRVGVASL_					0	0	0		ENST00000482878.5_1_16:772872-773550:-|nuORF;ENST00000481804.5_1_16:772680-773505:-|nuORF	ENST00000482878.5_1_16:772872-773550:-|nuORF	ENST00000482878.5_1_16:772872-773550:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.2720947265625	2	470.272158	938.529764	-1.7118	-0.000805	1.6827	0.00079131	-0.029114	-1.3691E-05	470.2729404281299	92.166	2.8676	92.352	91.202	94.069	0.18582					129	67	3	0	0	0	0.7932	1	9241	9241		21.96	1.013	1	1756700			15177	12470	10445	10454	17469	17469					0.05804009365908769
HTSDFRTDDS	10	Unmodified	_HTSDFRTDDS_					0	0	0		ENST00000493679.5_1_7:72951715-72954359:-|nuORF;nc|ENSG00000106635|Q9BQE9-2|BCL7B;ENST00000448175.5_1_7:72951630-72966524:-|nuORF;ENST00000493671.5_1_7:72951630-72954491:-|nuORF;ENST00000493592.1_1_7:72954140-72971423:-|nuORF;nc|ENSG00000106635|Q9BQE9-3|BCL7B;ENSG00000106635|ENST00000223368|BCL7B;ENST00000482231.5_1_7:72951630-72971576:-|nuORF	ENST00000493679.5_1_7:72951715-72954359:-|nuORF	ENST00000493679.5_1_7:72951715-72954359:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8665161132812	2	590.746899	1179.47924	3.3741	0.0019932	-2.234	-0.0013197	1.1401	0.00067349	590.7458773804858	103.4	0.12041	103.36	103.29	103.41	-0.043762					4	2	2	0	0	0	0.37624	1	11324	11324		36.447	0	1	33336			15178	2308	10446	10455	17470	17470					-0.10331609540412501
HTSFLHPPTL	10	Unmodified	_HTSFLHPPTL_					0	0	0		ENST00000448521.5_1_7:44100550-44100796:+|nuORF	ENST00000448521.5_1_7:44100550-44100796:+|nuORF	ENST00000448521.5_1_7:44100550-44100796:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.8063354492188	2	575.306198	1148.59784	-0.075104	-4.3208E-05	3.4429	0.0019807	3.3678	0.0019375	575.3081181567492	33.387	0.63376	33.556	33.187	33.821	0.16971					20	14	2	0	0	0	0.37624	1	2415	2415		26.693	0	1	561300			15179	11859	10447	10456	17471	17471					0.029488342258900957
HTSKISKA	8	Unmodified	_HTSKISKA_					0	0	0		ENSG00000133636|ENST00000256010|NTS	ENSG00000133636|ENST00000256010|NTS	ENSG00000133636|ENST00000256010|NTS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.2554016113281	2	436.253434	870.492316	2.1857	0.0009535	0.79812	0.00034818	2.9838	0.0013017	436.2535659232107	112.82	1.3997	112.85	112.71	114.11	0.028854					52	37	2	0	0	0	0.87922	1	12458	12458		31.955	2.8053	1	994690			15180	3885	10448	10457	17472	17472					0.051889181002820806
HTSKNTFQ	8	Unmodified	_HTSKNTFQ_					0	0	0		ENST00000473653.1_1_1:7846839-7848157:+|nuORF	ENST00000473653.1_1_1:7846839-7848157:+|nuORF	ENST00000473653.1_1_1:7846839-7848157:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.7370300292969	2	481.738148	961.461744	-0.23053	-0.00011106	-0.087754	-4.2274E-05	-0.31829	-0.00015333	481.7381215655853	30.725	0.56016	30.678	30.497	31.057	-0.047064					23	14	2	0	0	0	0.89962	1	1699	1699		38.806	3.1879	1	48021			15181	12288	10449	10458	17473	17473					-0.020528602847548427
HTSKPRGG	8	Unmodified	_HTSKPRGG_					0	0	0		ENST00000327367.8_1_15:67483018-67483132:+|nuORF	ENST00000327367.8_1_15:67483018-67483132:+|nuORF	ENST00000327367.8_1_15:67483018-67483132:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2275085449219	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.90465	1	7744	7744		40.573	1.7665	1	743780			15182	10086	10450	10459	17474	17474					0.015265941262441629
HTSKPRGG	8	Unmodified	_HTSKPRGG_					0	0	0		ENST00000327367.8_1_15:67483018-67483132:+|nuORF	ENST00000327367.8_1_15:67483018-67483132:+|nuORF	ENST00000327367.8_1_15:67483018-67483132:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2275390625	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.89494	1	7768	7768		37.159	6.6555	1	888480			15183	10086	10450	10459	17475	17475					0.015265941262441629
HTSLQDVKRLL	11	Unmodified	_HTSLQDVKRLL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2558898925781	3	437.257738	1308.75138	-1.0127	-0.0004428	0.097666	4.2705E-05	-0.91501	-0.00040009	437.25769841228777	99.435	2.9287	99.435	98.234	101.16	0					165	70	3	0	0	0	0.68431	2	10086	10049;10086		34.087	3.0184	1	385900	+		15184	22445	10451	10460	17476;17477	17477					0.10935824271564343
HTSLQDVKRLL	11	Unmodified	_HTSLQDVKRLL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2571105957031	3	437.257738	1308.75138	-0.16089	-7.0349E-05	-0.76824	-0.00033592	-0.92913	-0.00040627	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.6396	5	10518	10518;10530;10588;10613;10704		39.873	12.229	1	727380	+		15185	22445	10451	10460	17478;17479;17480;17481;17482	17478					0.10935824271564343
HTSLQDVKRLL	11	Unmodified	_HTSLQDVKRLL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.25689697265625	3	437.257738	1308.75138	2.3979	0.0010485	-3.3832	-0.0014793	-0.98538	-0.00043086	437.25617297786823	99.22	2.8692	99.166	98.246	101.11	-0.053734					176	66	3	0	0	0	0.69071	4	10686	10657;10669;10686;10734		33.039	10.478	1	988170	+		15186	22445	10451	10460	17483;17484;17485;17486	17485					0.10935824271564343
HTSLQDVKRLL	11	Unmodified	_HTSLQDVKRLL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.25714111328125	3	437.257738	1308.75138	2.1229	0.00092824	-3.14	-0.001373	-1.0171	-0.00044476	437.2563089738452	99.067	2.7047	99.115	98.232	100.94	0.048157					189	62	4	0	0	0	0.62889	7	10549	10514;10525;10536;10549;10589;10697;10728		41.109	9.8547	1	798600	+		15187	22445	10451	10460	17487;17488;17489;17490;17491;17492;17493	17490					0.10935824271564343
HTSLQDVKRLL	11	Unmodified	_HTSLQDVKRLL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.256103515625	3	437.257738	1308.75138	-1.4909	-0.0006519	0.61457	0.00026872	-0.87632	-0.00038318	437.257922541183	97.247	2.1693	97.478	96.225	98.394	0.23103					136	50	3	0	0	0	0.73647	2	10105	10034;10105		25.068	6.5367	1	478050	+		15188	22445	10451	10460	17494;17495	17495					0.10935824271564343
HTSLQDVKRLL	11	Unmodified	_HTSLQDVKRLL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2572937011719	3	437.257738	1308.75138	-1.4866	-0.00065002	0.58687	0.00025661	-0.89971	-0.00039341	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.56641	3	10319	10196;10319;10342		47.228	14.188	1	981430	+		15189	22445	10451	10460	17496;17497;17498	17497					0.10935824271564343
HTSLQDVKRLL	11	Unmodified	_HTSLQDVKRLL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.25543212890625	3	437.257738	1308.75138	0.7066	0.00030897	-1.5491	-0.00067738	-0.84254	-0.00036841	437.25702551453304	97.287	2.1363	97.451	96.19	98.327	0.16316					129	49	3	0	0	0	0.72374	1	10113	10113		27.644	3.4121	1	293250	+		15190	22445	10451	10460	17499	17499					0.10935824271564343
HTSLQDVKRLL	11	Unmodified	_HTSLQDVKRLL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2566833496094	3	437.257738	1308.75138	0.72446	0.00031677	-1.611	-0.00070442	-0.88654	-0.00038765	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.71207	2	10252	10252;10275		29.551	10.288	1	670840	+		15191	22445	10451	10460	17500;17501	17500					0.10935824271564343
HTSLQDVKRLL	11	Unmodified	_HTSLQDVKRLL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2574462890625	3	437.257738	1308.75138	-1.8163	-0.00079418	0.93317	0.00040803	-0.8831	-0.00038614	437.2580894693445	99.183	2.5872	99.369	98.322	100.91	0.18581					159	59	3	0	0	0	0.68431	5	10329	10211;10258;10269;10282;10329		34.087	8.6562	1	447430	+		15192	22445	10451	10460	17502;17503;17504;17505;17506	17506					0.10935824271564343
HTSLQDVKRLL	11	Unmodified	_HTSLQDVKRLL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2559509277344	3	437.257738	1308.75138	1.2902	0.00056413	-2.0789	-0.000909	-0.7887	-0.00034487	437.2568346681843	98.713	2.2467	99.074	98.073	100.32	0.36136					142	55	3	0	0	0	0.71207	1	11916	11916		29.551	6.1728	1	470200	+		15193	22445	10451	10460	17507	17507					0.10935824271564343
HTSLQDVKRLL	11	Unmodified	_HTSLQDVKRLL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	437.257738	1308.75138	1.2902	0.00056413	-2.0789	-0.000909	-0.7887	-0.00034487	437.2568346681843	98.713	2.2467	99.074	98.073	100.32	0.36136	-0.18507	-0.0010021	NaN	47.228	142	55	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	470200	+		15194	22445	10451	10460							0.10935824271564343
HTSLVPARRP	10	Unmodified	_HTSLVPARRP_					0	0	0			REV__ENSG00000133247|ENST00000255613|KMT5C	REV__ENSG00000133247|ENST00000255613|KMT5C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3302001953125	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.86718	1	11268	11268		27.882	4.8398	1	6182600	+		15195	19067	10452	10461	17508	17508					0.08550747585650242
HTSPLTQIRLN	11	Unmodified	_HTSPLTQIRLN_					0	0	0		nc|ENSG00000113593|Q96BP3-2|PPWD1;ENSG00000113593|ENST00000261308|PPWD1	nc|ENSG00000113593|Q96BP3-2|PPWD1	nc|ENSG00000113593|Q96BP3-2|PPWD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3599853515625	2	640.359493	1278.70443	2.419	0.001549	-3.4406	-0.0022032	-1.0216	-0.00065422	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.7144	1	10903	10903		29.17	3.596	1	625580			15196	2731	10453	10462	17509	17509					0.07622964720439995
HTSRPSWLLW	10	Unmodified	_HTSRPSWLLW_					0	0	0		ENST00000378891.9_3_1:1270725-1270893:-|nuORF	ENST00000378891.9_3_1:1270725-1270893:-|nuORF	ENST00000378891.9_3_1:1270725-1270893:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3639526367188	2	641.838197	1281.66184	2.7044	0.0017358	0.4127	0.00026489	3.1171	0.0020007	641.8387217087796	110.86	0.40293	110.83	110.61	111.01	-0.026321					14	10	2	0	0	0	0.37624	1	12248	12248		32.812	0	1	41718			15197	10879	10454	10463	17510	17510					0.032276143828539716
HTSRQIGAPT	10	Unmodified	_HTSRQIGAPT_					0	0	0			REV__ENSG00000187689|ENST00000339336|AMTN	REV__ENSG00000187689|ENST00000339336|AMTN	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	534.2832641601562	2	534.283254	1066.55196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.2	1	110.15	109.65	110.65	-0.055084								0	0	0	0.45132	1	11978	11978		29.15	1.2673	1		+		15198	22933	10455	10464	17511	17511					0.021341890436588073
HTSSCNSPL	9	Carbamidomethyl (C)	_HTSSC(Carbamidomethyl (C))NSPL_	HTSSC(1)NSPL		HTSSC(74)NSPL		0	1	0			REV__ENSG00000108001|ENST00000440978|EBF3	REV__ENSG00000108001|ENST00000440978|EBF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.71795654296875	2	501.719098	1001.42364	-0.040377	-2.0258E-05	-4.2301	-0.0021223	-4.2705	-0.0021426	501.71670898339215	56.942	0.66004	56.93	56.657	57.317	-0.012203					33	22	2	0	0	0	0.19953	1	5120	5120		73.975	16.163	1	201550	+		15199	17688	10456	10465	17512	17512	230				-0.07701114261726616
HTSSCNSPL	9	Carbamidomethyl (C)	_HTSSC(Carbamidomethyl (C))NSPL_					0	1	0			REV__ENSG00000108001|ENST00000440978|EBF3	REV__ENSG00000108001|ENST00000440978|EBF3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	501.719098	1001.42364	-0.040377	-2.0258E-05	-4.2301	-0.0021223	-4.2705	-0.0021426	501.71670898339215	56.942	0.66004	56.93	56.657	57.317	-0.012203	-0.13105	-0.00046766	NaN	73.975	33	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	201550	+		15200	17688	10456	10465			230				-0.07701114261726616
HTSSCNSPL	9	Carbamidomethyl (C)	_HTSSC(Carbamidomethyl (C))NSPL_					0	1	0			REV__ENSG00000108001|ENST00000440978|EBF3	REV__ENSG00000108001|ENST00000440978|EBF3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	501.719098	1001.42364	-0.15021	-7.5366E-05	-4.2936	-0.0021542	-4.4438	-0.0022295	501.7167325558943	56.889	0.62183	56.86	56.645	57.267	-0.028664	-0.20067	-0.00053137	NaN	73.975	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	249860	+		15201	17688	10456	10465			230				-0.07701114261726616
HTSSCNSPL	9	Carbamidomethyl (C)	_HTSSC(Carbamidomethyl (C))NSPL_					0	1	0			REV__ENSG00000108001|ENST00000440978|EBF3	REV__ENSG00000108001|ENST00000440978|EBF3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	501.719098	1001.42364	0.79414	0.00039843	-5.8323	-0.0029262	-5.0381	-0.0025277	501.71589516741585	56.82	0.72613	57.375	56.916	57.642	0.55512	0.31461	-0.0020754	NaN	73.975	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	362090	+		15202	17688	10456	10465			230				-0.07701114261726616
HTSSVKKGNEI	11	Unmodified	_HTSSVKKGNEI_					0	0	0			REV__ENSG00000116285|ENST00000377482|ERRFI1	REV__ENSG00000116285|ENST00000377482|ERRFI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.323486328125	2	600.322576	1198.6306	-0.18991	-0.00011401	2.4193	0.0014524	2.2294	0.0013384	600.3238493032328	110.54	1.5294	110.54	110.28	111.81	0					121	48	3	0	0	0	0.66929	1	11483	11483		36.447	0	1	894450	+		15203	18195	10457	10466	17513	17513					0.0392299655811712
HTSTLVAALF	10	Unmodified	_HTSTLVAALF_					0	0	0			REV__ENST00000360902.1_1_7:98629061-98633097:+|nuORF	REV__ENST00000360902.1_1_7:98629061-98633097:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.29345703125	2	530.295299	1058.57605	-1.5163	-0.00080409	-2.0724	-0.001099	-3.5887	-0.0019031	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.84112	1	9095	9095		37.159	2.9866	1	1686700	+		15204	25487	10458	10467	17514	17514					0.04910029477309763
HTSVGLRN	8	Unmodified	_HTSVGLRN_					0	0	0		ENST00000491911.5_1_9:140506613-140506760:+|nuORF	ENST00000491911.5_1_9:140506613-140506760:+|nuORF	ENST00000491911.5_1_9:140506613-140506760:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2406921386719	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.89962	2	8173	8173;8387		38.806	8.3025	1	1238700			15205	12695	10459	10468	17515;17516	17515					0.021228632977113193
HTSVGLRN	8	Unmodified	_HTSVGLRN_					0	0	0		ENST00000491911.5_1_9:140506613-140506760:+|nuORF	ENST00000491911.5_1_9:140506613-140506760:+|nuORF	ENST00000491911.5_1_9:140506613-140506760:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.24066162109375	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.89962	1	7910	7910		38.806	3.1879	1	1219900			15206	12695	10459	10468	17517	17517					0.021228632977113193
HTSVGLRN	8	Unmodified	_HTSVGLRN_					0	0	0		ENST00000491911.5_1_9:140506613-140506760:+|nuORF	ENST00000491911.5_1_9:140506613-140506760:+|nuORF	ENST00000491911.5_1_9:140506613-140506760:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2406005859375	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.87064	1	7877	7877		29.15	0	1	1094000			15207	12695	10459	10468	17518	17518					0.021228632977113193
HTTAKRSL	8	Unmodified	_HTTAKRSL_					0	0	0		ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2635498046875	2	457.264333	912.514114	-1.2803	-0.00058543	1.4305	0.00065413	0.15023	6.8693E-05	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.86677	2	7491	7361;7491		44.117	5.3107	1	812040			15208	9491	10460	10469	17519;17520	17520					0.05435722848869773
HTTAKRSL	8	Unmodified	_HTTAKRSL_					0	0	0		ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2641906738281	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.86677	1	7715	7715		27.882	1.0861	1	2957200			15209	9491	10460	10469	17521	17521					0.05435722848869773
HTTAKRSL	8	Unmodified	_HTTAKRSL_					0	0	0		ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2637023925781	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.86677	5	8350	8326;8338;8350;8362;8423		35.618	6.1195	1	4511100			15210	9491	10460	10469	17522;17523;17524;17525;17526	17524					0.05435722848869773
HTTAKRSL	8	Unmodified	_HTTAKRSL_					0	0	0		ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.263427734375	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.88185	1	8166	8166		32.812	3.6629	1	4885100			15211	9491	10460	10469	17527	17527					0.05435722848869773
HTTAKRSL	8	Unmodified	_HTTAKRSL_					0	0	0		ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2637023925781	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.89043	1	8505	8505		35.618	0.41757	1	4814400			15212	9491	10460	10469	17528	17528					0.05435722848869773
HTTAKRSL	8	Unmodified	_HTTAKRSL_					0	0	0		ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2637634277344	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.87422	1	7560	7560		30.318	1.1682	1	1329900			15213	9491	10460	10469	17529	17529					0.05435722848869773
HTTAKRSL	8	Unmodified	_HTTAKRSL_					0	0	0		ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2640686035156	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.86677	4	7955	7955;7991;8063;8087		35.618	2.2177	1	4732500			15214	9491	10460	10469	17530;17531;17532;17533	17530					0.05435722848869773
HTTAKRSL	8	Unmodified	_HTTAKRSL_					0	0	0		ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.263671875	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.89043	1	8129	8129		35.618	1.4457	1	4597500			15215	9491	10460	10469	17534	17534					0.05435722848869773
HTTAKRSL	8	Unmodified	_HTTAKRSL_					0	0	0		ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2637634277344	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.88185	2	9626	9579;9626		35.618	5.1146	1	3505500			15216	9491	10460	10469	17535;17536	17536					0.05435722848869773
HTTAKRSL	8	Unmodified	_HTTAKRSL_					0	0	0		ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	ENST00000264956.10_2_4:5813382-5814396:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2633361816406	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.86677	3	9713	9713;9725;9739		44.117	7.0883	1	4402400			15217	9491	10460	10469	17537;17538;17539	17537					0.05435722848869773
HTTGLNSF	8	Unmodified	_HTTGLNSF_					0	0	0			REV__ENSG00000140740|ENST00000268379|UQCRC2	REV__ENSG00000140740|ENST00000268379|UQCRC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.9039611816406	2	438.714142	875.413731	1.3955	0.00061221	-1.4975	-0.00065697	-0.10202	-4.4756E-05	438.71347055559426	34.271	0.36916	34.576	34.366	34.735	0.30494					11	8	2	0	0	0	0.4196	1	2543	2543		12.207	0	1	83688	+		15218	19639	10461	10470	17540	17540					-0.028959342048096914
HTTIFKKL	8	Unmodified	_HTTIFKKL_					0	0	0			REV__ENST00000440636.1_1_7:21467869-21468449:+|nuORF	REV__ENST00000440636.1_1_7:21467869-21468449:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.30059814453125	2	494.302927	986.591301	-1.6335	-0.00080746	-2.893	-0.00143	-4.5265	-0.0022375	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.87479	1	10177	10177		30.504	6.3009	1	46933000	+		15219	26742	10462	10471	17541	17541					0.09746941065179726
HTTILSKFV	9	Unmodified	_HTTILSKFV_					0	0	0			REV__ENST00000528411.1_1_11:85734561-85780352:-|nuORF	REV__ENST00000528411.1_1_11:85734561-85780352:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.305667	1044.59678	-1.4863	-0.0007778	-2.6443	-0.0013838	-4.1306	-0.0021616	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.76764	1	8500	8500		34.173	2.6427	1	3566700	+		15220	16684	10463	10472	17542	17542					0.0762661985700106
HTTILSKFV	9	Unmodified	_HTTILSKFV_					0	0	0			REV__ENST00000528411.1_1_11:85734561-85780352:-|nuORF	REV__ENST00000528411.1_1_11:85734561-85780352:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3032836914062	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.67345	2	8993	8931;8993		42.396	6.7778	1	12189000	+		15221	16684	10463	10472	17543;17544	17544					0.0762661985700106
HTTLNSHG	8	Unmodified	_HTTLNSHG_					0	0	0			REV__ENSG00000170949|ENST00000683776|ZNF160	REV__ENSG00000170949|ENST00000683776|ZNF160	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.70928955078125	2	433.709391	865.404229	0.43508	0.0001887	-0.045136	-1.9576E-05	0.38994	0.00016912	433.7091690770371	19.33	0.90084	18.701	18.358	19.259	-0.62961					44	19	4	0	0	0	0.91005	1	506	506		42.474	1.9018	1	324290	+		15222	21703	10464	10473	17545	17545					-0.033857024903227284
HTTLTFRL	8	Unmodified	_HTTLTFRL_					0	0	0		ENSG00000148215|ENST00000373680|OR5C1	ENSG00000148215|ENST00000373680|OR5C1	ENSG00000148215|ENST00000373680|OR5C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7803649902344	2	494.782359	987.550165	-0.074951	-3.7084E-05	-3.8536	-0.0019067	-3.9285	-0.0019438	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.85277	1	8773	8773		25.45	1.2474	1	651380			15223	4939	10465	10474	17546	17546					0.05589180025708629
HTTRIKGT	8	Unmodified	_HTTRIKGT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2638854980469	2	457.264333	912.514114	-1.2803	-0.00058543	1.4305	0.00065413	0.15023	6.8693E-05	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.87064	1	7377	7377		29.15	1.2673	1	812040	+		15224	17672	10466	10475	17547	17547					0.054357228488470355
HTTRIKGT	8	Unmodified	_HTTRIKGT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2642822265625	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.87922	3	7668	7668;7860;7892		31.955	4.0726	1	2957200	+		15225	17672	10466	10475	17548;17549;17550	17548					0.054357228488470355
HTTRIKGT	8	Unmodified	_HTTRIKGT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26336669921875	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.87922	1	7959	7959		31.955	5.1588	1	4511100	+		15226	17672	10466	10475	17551	17551					0.054357228488470355
HTTRIKGT	8	Unmodified	_HTTRIKGT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2636413574219	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.87922	1	8032	8032		31.955	1.4512	1	1458600	+		15227	17672	10466	10475	17552	17552					0.054357228488470355
HTTRIKGT	8	Unmodified	_HTTRIKGT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2626037597656	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.87064	1	8576	8576		29.15	0	1	4814400	+		15228	17672	10466	10475	17553	17553					0.054357228488470355
HTTRIKGT	8	Unmodified	_HTTRIKGT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2639465332031	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.84341	1	7507	7507		24.203	1.1603	1	1329900	+		15229	17672	10466	10475	17554	17554					0.054357228488470355
HTTRIKGT	8	Unmodified	_HTTRIKGT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26300048828125	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.84341	2	7745	7710;7745		29.15	3.5755	1	4732500	+		15230	17672	10466	10475	17555;17556	17556					0.054357228488470355
HTTRIKGT	8	Unmodified	_HTTRIKGT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2639465332031	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.87064	5	7822	7822;7918;8056;8153;8189		37.159	9.2769	1	4597500	+		15231	17672	10466	10475	17557;17558;17559;17560;17561	17557					0.054357228488470355
HTTRIKGT	8	Unmodified	_HTTRIKGT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2640075683594	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.89494	1	7525	7525		37.159	6.6555	1	1032000	+		15232	17672	10466	10475	17562	17562					0.054357228488470355
HTTRIKGT	8	Unmodified	_HTTRIKGT_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.26422119140625	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.87064	1	9481	9481		29.15	1.2673	1	3505500	+		15233	17672	10466	10475	17563	17563					0.054357228488470355
HTTTHTPAGT	10	Unmodified	_HTTTHTPAGT_					0	0	0			REV__ENST00000423582.5_1_19:37095760-37096141:+|nuORF	REV__ENST00000423582.5_1_19:37095760-37096141:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2484741210938	2	512.246338	1022.47812	-0.0076719	-3.9299E-06	0.28689	0.00014696	0.27922	0.00014303	512.2463929857291	32.389	0.80414	32.335	31.916	32.72	-0.05434					25	17	2	0	0	0	0.86348	1	1898	1898		31.53	0	1	37804	+		15234	26510	10467	10476	17564	17564					-0.032217791186667455
HTVFLTLSK	9	Unmodified	_HTVFLTLSK_					0	0	0			REV__ENSG00000113318|ENST00000265081|MSH3	REV__ENSG00000113318|ENST00000265081|MSH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035888671875	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.69624	1	8823	8823		40.778	7.9657	1	12189000	+		15235	17990	10468	10477	17565	17565					0.0762661985700106
HTVGRRRKKRR	11	Unmodified	_HTVGRRRKKRR_					0	0	0		ENST00000235307.6_1_1:184356289-184446531:+|nuORF	ENST00000235307.6_1_1:184356289-184446531:+|nuORF	ENST00000235307.6_1_1:184356289-184446531:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.9744873046875	3	483.974781	1448.90251	0.065798	3.1845E-05	-0.044735	-2.1651E-05	0.021063	1.0194E-05	483.9747538518178	16.427	0.37356	16.486	16.338	16.711	0.059269					42	15	4	0	0	0	0.77511	1	143	143		16.53	3.0219	1	767320			15236	9231	10469	10478	17566	17566					0.19601868213430862
HTVGRRRKKRR	11	Unmodified	_HTVGRRRKKRR_					0	0	0		ENST00000235307.6_1_1:184356289-184446531:+|nuORF	ENST00000235307.6_1_1:184356289-184446531:+|nuORF	ENST00000235307.6_1_1:184356289-184446531:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.97479248046875	3	483.974781	1448.90251	0.71829	0.00034763	-0.91377	-0.00044224	-0.19549	-9.4611E-05	483.9743432550441	16.535	0.41935	16.511	16.337	16.757	-0.024035					37	17	3	0	0	0	0.7896	1	149	149		13.508	0	1	771450			15237	9231	10469	10478	17567	17567					0.19601868213430862
HTVHLGSAAP	10	Unmodified	_HTVHLGSAAP_					0	0	0		ENSG00000164620|ENST00000297164|RELL2	ENSG00000164620|ENST00000297164|RELL2	ENSG00000164620|ENST00000297164|RELL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7802429199219	2	495.261791	988.509028	-1.5942	-0.00078952	2.6012	0.0012883	1.007	0.00049873	495.26341439705783	86.885	0.34792	87.05	86.868	87.216	0.16473					10	7	2	0	0	0	0.37624	1	8521	8521		37.159	0	1	26416			15238	5981	10470	10479	17568	17568					0.014314189862261628
HTVIMVTL	8	Unmodified	_HTVIMVTL_					0	0	0		ENST00000456360.5_1_Y:23556925-23559248:-|nuORF	ENST00000456360.5_1_Y:23556925-23559248:-|nuORF	ENST00000456360.5_1_Y:23556925-23559248:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2638854980469	2	457.262413	912.510274	0.43756	0.00020008	3.6399	0.0016644	4.0774	0.0018645	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.87922	1	8160	8160		31.955	1.4512	1	4814400			15239	11967	10471	10480	17569	17569					0.05051917030777986
HTVITSRVV	9	Unmodified	_HTVITSRVV_					0	0	0		CON__Q3T052	CON__Q3T052	CON__Q3T052	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3013916015625	2	506.300916	1010.58728	-1.5945	-0.00080728	1.9293	0.00097679	0.33481	0.00016952	506.30185711798276	96.376	1.2072	96.579	96.02	97.227	0.20241					70	27	3	0	0	0	0.64922	1	9906	9906		44.117	11.304	1	332450		+	15240	622	10472	10481	17570	17570					0.08240851571486019
HTVLEIIC	8	Unmodified	_HTVLEIIC_					0	0	0		ENST00000477948.1_1_1:107866915-107871621:+|nuORF;nc|ENSG00000162631|Q9Y2I2-2|NTNG1;ENST00000294649.8_1_1:107691215-107950335:+|nuORF;nc|ENSG00000162631|Q9Y2I2-1|NTNG1;nc|ENSG00000162631|Q9Y2I2-5|NTNG1;nc|ENSG00000162631|Q9Y2I2-4|NTNG1;nc|ENSG00000162631|Q9Y2I2-6|NTNG1;ENSG00000162631|ENST00000370068|NTNG1	ENST00000477948.1_1_1:107866915-107871621:+|nuORF	ENST00000477948.1_1_1:107866915-107871621:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2532958984375	2	464.252046	926.489538	0.72749	0.00033774	3.541	0.0016439	4.2685	0.0019816	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.88915	1	8852	8852		35.201	5.3592	1	1578600			15241	5710	10473	10482	17571	17571					0.023353266511321635
HTVLEKFK	8	Unmodified	_HTVLEKFK_					0	0	0			REV__ENSG00000258484|ENST00000310673|SPESP1	REV__ENSG00000258484|ENST00000310673|SPESP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2904052734375	2	501.292559	1000.57057	-0.97974	-0.00049113	-3.1223	-0.0015652	-4.1021	-0.0020563	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.90523	1	8069	8069		40.778	5.1599	1	2111000	+		15242	23927	10474	10483	17572	17572					0.07030350685533904
HTVLVWLALVG	11	Unmodified	_HTVLVWLALVG_					0	0	0			REV__ENSG00000211584|ENST00000442218|SLC48A1	REV__ENSG00000211584|ENST00000442218|SLC48A1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.366943359375	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.28	1	118.25	117.75	118.75	-0.024208								0	0	0	0.56276	1	13100	13100		9.7057	0	1		+		15243	23598	10475	10484	17573	17573					0.11739143707814037
HTVPTICI	8	Unmodified	_HTVPTICI_					0	0	0		ENST00000517876.5_1_5:154255011-154255200:+|nuORF	ENST00000517876.5_1_5:154255011-154255200:+|nuORF	ENST00000517876.5_1_5:154255011-154255200:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2408447265625	2	442.238938	882.463324	1.3093	0.00057901	3.1237	0.0013814	4.433	0.0019604	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.91005	1	8031	8031		42.474	3.453	1	1244000			15244	13109	10476	10485	17574	17574					0.017390574796422698
HTVQLQLRSLA	11	Unmodified	_HTVQLQLRSLA_					0	0	0		nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000529001.5_1_11:118402516-118404307:+|nuORF;nc|ENSG00000149582|Q86YD3-5|TMEM25;nc|ENSG00000149582|Q86YD3-2|TMEM25;nc|ENSG00000149582|Q86YD3-4|TMEM25;ENSG00000149582|ENST00000313236|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	ENST00000524522.5_1_11:118402605-118405292:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3695678710938	2	633.369861	1264.72517	-0.11908	-7.5423E-05	-0.90029	-0.00057022	-1.0194	-0.00064564	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.62614	2	9548	9434;9548		41.427	0	1	2722900			15245	5039;13217	10477	10486	17575;17576	17576					0.10339555100085818
HTVQLQLRSLA	11	Unmodified	_HTVQLQLRSLA_					0	0	0		nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000529001.5_1_11:118402516-118404307:+|nuORF;nc|ENSG00000149582|Q86YD3-5|TMEM25;nc|ENSG00000149582|Q86YD3-2|TMEM25;nc|ENSG00000149582|Q86YD3-4|TMEM25;ENSG00000149582|ENST00000313236|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	ENST00000524522.5_1_11:118402605-118405292:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.369140625	2	633.369861	1264.72517	1.4675	0.00092945	-2.7221	-0.0017241	-1.2546	-0.00079462	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.52015	1	9780	9780		41.08	5.4618	1	5460600			15246	5039;13217	10477	10486	17577	17577					0.10339555100085818
HTVQLQLRSLA	11	Unmodified	_HTVQLQLRSLA_					0	0	0		nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000529001.5_1_11:118402516-118404307:+|nuORF;nc|ENSG00000149582|Q86YD3-5|TMEM25;nc|ENSG00000149582|Q86YD3-2|TMEM25;nc|ENSG00000149582|Q86YD3-4|TMEM25;ENSG00000149582|ENST00000313236|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	ENST00000524522.5_1_11:118402605-118405292:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3683471679688	2	633.369861	1264.72517	1.4714	0.00093196	-2.6119	-0.0016543	-1.1404	-0.0007223	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.67568	2	10255	10255;10387		32.751	8.2317	1	11430000			15247	5039;13217	10477	10486	17578;17579	17578					0.10339555100085818
HTVQLQLRSLA	11	Unmodified	_HTVQLQLRSLA_					0	0	0		nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000529001.5_1_11:118402516-118404307:+|nuORF;nc|ENSG00000149582|Q86YD3-5|TMEM25;nc|ENSG00000149582|Q86YD3-2|TMEM25;nc|ENSG00000149582|Q86YD3-4|TMEM25;ENSG00000149582|ENST00000313236|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	ENST00000524522.5_1_11:118402605-118405292:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3700561523438	2	633.369861	1264.72517	0.88638	0.00056141	-2.1201	-0.0013428	-1.2337	-0.0007814	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.59499	2	9771	9771;9854		45.022	7.514	1	5166300			15248	5039;13217	10477	10486	17580;17581	17580					0.10339555100085818
HTVQLQLRSLA	11	Unmodified	_HTVQLQLRSLA_					0	0	0		nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000529001.5_1_11:118402516-118404307:+|nuORF;nc|ENSG00000149582|Q86YD3-5|TMEM25;nc|ENSG00000149582|Q86YD3-2|TMEM25;nc|ENSG00000149582|Q86YD3-4|TMEM25;ENSG00000149582|ENST00000313236|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	ENST00000524522.5_1_11:118402605-118405292:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.367431640625	2	633.369861	1264.72517	1.5936	0.0010093	-2.5684	-0.0016267	-0.97477	-0.00061739	633.3681450827713	95.612	2.2846	96.032	94.734	97.018	0.41963					200	55	4	0	0	0	0.59831	2	11599	11463;11599		42.864	0.94209	1	3838500			15249	5039;13217	10477	10486	17582;17583	17583					0.10339555100085818
HTVQLQLRSLA	11	Unmodified	_HTVQLQLRSLA_					0	0	0		nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000529001.5_1_11:118402516-118404307:+|nuORF;nc|ENSG00000149582|Q86YD3-5|TMEM25;nc|ENSG00000149582|Q86YD3-2|TMEM25;nc|ENSG00000149582|Q86YD3-4|TMEM25;ENSG00000149582|ENST00000313236|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000524522.5_1_11:118402605-118405292:+|nuORF	ENST00000524522.5_1_11:118402605-118405292:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3690185546875	2	633.369861	1264.72517	2.3091	0.0014625	-3.4627	-0.0021932	-1.1537	-0.00073069	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.72429	1	11784	11784		30.569	3.876	1	10333000			15250	5039;13217	10477	10486	17584	17584					0.10339555100085818
HTVRKKEPR	9	Unmodified	_HTVRKKEPR_					0	0	0			REV__ENSG00000125352|ENST00000371442|RNF113A	REV__ENSG00000125352|ENST00000371442|RNF113A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8427734375	2	575.843813	1149.67307	1.9391	0.0011166	-3.5988	-0.0020723	-1.6596	-0.00095569	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.76764	1	9724	9724		34.173	10.65	1	5986700	+		15251	18638	10478	10487	17585	17585					0.10422436476983421
HTVRKKEPR	9	Unmodified	_HTVRKKEPR_					0	0	0			REV__ENSG00000125352|ENST00000371442|RNF113A	REV__ENSG00000125352|ENST00000371442|RNF113A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8429565429688	2	575.843813	1149.67307	0.80402	0.00046299	-2.4364	-0.001403	-1.6324	-0.00094001	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.7932	1	9277	9277		26.693	1.2427	1	6947200	+		15252	18638	10478	10487	17586	17586					0.10422436476983421
HTVRLPCRKR	10	Unmodified	_HTVRLPCRKR_					0	0	0		ENST00000597076.5_1_19:17881245-17885205:+|nuORF	ENST00000597076.5_1_19:17881245-17885205:+|nuORF	ENST00000597076.5_1_19:17881245-17885205:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5816955566406	3	422.583902	1264.72988	-1.733	-0.00073233	-2.8198	-0.0011916	-4.5528	-0.0019239	422.5826240153895	97.352	3.8291	97.583	96.825	100.65	0.23103					216	89	4	0	0	0	0.86207	1	10135	10135		24.232	0	1	506650			15253	14345	10479	10488	17587	17587					0.1081016076184369
HTVRPHGYD	9	Unmodified	_HTVRPHGYD_					0	0	0		chr1:150260248-150261578|38|19.29|0.16|6.91|+|0|CA14,CA14|1;ENST00000607652.5_1_1:150230352-150235277:+|nuORF	chr1:150260248-150261578|38|19.29|0.16|6.91|+|0|CA14,CA14|1	chr1:150260248-150261578|38|19.29|0.16|6.91|+|0|CA14,CA14|1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.787841796875	2	541.262322	1080.51009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.21	1	77.302	76.802	77.802	0.091438								0	0	0	0.29475	1	7212	7212		32.812	0.85756	1				15254	22	10480	10489	17588	17588					-0.02694366644868751
HTVRVQGV	8	Unmodified	_HTVRVQGV_					0	0	0		nc|ENSG00000106683|P53667-3|LIMK1;ENST00000483414.1_1_7:73511493-73523492:+|nuORF;nc|ENSG00000106683|P53667-4|LIMK1;nc|ENSG00000106683|P53667-2|LIMK1;ENSG00000106683|ENST00000336180|LIMK1	nc|ENSG00000106683|P53667-3|LIMK1	nc|ENSG00000106683|P53667-3|LIMK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.2581787109375	2	448.259051	894.503549	-1.3629	-0.00061094	1.4471	0.00064866	0.084131	3.7712E-05	448.2596556507269	89.763	2.6764	90.233	89.394	92.071	0.47068					116	66	2	0	0	0	0.82658	1	10669	10669		21.96	0	1	2268200			15255	2313	10481	10490	17589	17589					0.052077401944416124
HTVSSFRLPI	10	Unmodified	_HTVSSFRLPI_					0	0	0			REV__ENST00000008527.9_1_12:107486977-107487346:-|nuORF	REV__ENST00000008527.9_1_12:107486977-107487346:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	578.825439453125	2	578.827298	1155.64004	-0.0099214	-5.7428E-06	-4.1309	-0.0023911	-4.1408	-0.0023968	578.8248510195858	65.218	0.38277	65.183	65.028	65.41	-0.034798					33	18	2	0	0	0	0.86272	1	6258	6258		24.519	0.31644	1	259420	+		15256	24058	10482	10491	17590	17590					0.06844809634299054
HTVTVFAR	8	Unmodified	_HTVTVFAR_					0	0	0			REV__ENSG00000174106|ENST00000308330|LEMD3	REV__ENSG00000174106|ENST00000308330|LEMD3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2536315917969	2	465.761426	929.5083	-1.2934	-0.00060243	3.9765	0.0018521	2.6831	0.0012497	465.76283927171704	62.93	0.33524	62.958	62.896	63.231	0.02813					16	15	2	0	0	0	0.4196	1	5875	5875		10.866	3.6722	1	27470	+		15257	21973	10483	10492	17591	17591					0.04072624337186426
HTWKPSPLIV	10	Unmodified	_HTWKPSPLIV_					0	0	0		nc|ENSG00000117640|Q9H019-2|MTFR1L;nc|ENSG00000117640|Q9H019-3|MTFR1L;ENSG00000117640|ENST00000374303|MTFR1L	nc|ENSG00000117640|Q9H019-2|MTFR1L	nc|ENSG00000117640|Q9H019-2|MTFR1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3425903320312	2	589.340041	1176.66553	2.2135	0.0013045	2.3285	0.0013723	4.542	0.0026768	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.86218	3	9713	9713;9809;9847		32.812	2.0514	1	5579200			15258	2994	10484	10493	17592;17593;17594	17592					0.0842628415668969
HTWKPSPLIV	10	Unmodified	_HTWKPSPLIV_					0	0	0		nc|ENSG00000117640|Q9H019-2|MTFR1L;nc|ENSG00000117640|Q9H019-3|MTFR1L;ENSG00000117640|ENST00000374303|MTFR1L	nc|ENSG00000117640|Q9H019-2|MTFR1L	nc|ENSG00000117640|Q9H019-2|MTFR1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3426513671875	2	589.340041	1176.66553	2.472	0.0014569	2.3274	0.0013717	4.7995	0.0028285	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.86218	2	9953	9953;10231		32.812	2.4947	1	16740000			15259	2994	10484	10493	17595;17596	17595					0.0842628415668969
HTWKPSPLIV	10	Unmodified	_HTWKPSPLIV_					0	0	0		nc|ENSG00000117640|Q9H019-2|MTFR1L;nc|ENSG00000117640|Q9H019-3|MTFR1L;ENSG00000117640|ENST00000374303|MTFR1L	nc|ENSG00000117640|Q9H019-2|MTFR1L	nc|ENSG00000117640|Q9H019-2|MTFR1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427734375	2	589.340041	1176.66553	0.83312	0.00049099	4.0027	0.002359	4.8358	0.00285	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.86218	1	9477	9477		32.812	0.061884	1	20363000			15260	2994	10484	10493	17597	17597					0.0842628415668969
HTWKPSPLIV	10	Unmodified	_HTWKPSPLIV_					0	0	0		nc|ENSG00000117640|Q9H019-2|MTFR1L;nc|ENSG00000117640|Q9H019-3|MTFR1L;ENSG00000117640|ENST00000374303|MTFR1L	nc|ENSG00000117640|Q9H019-2|MTFR1L	nc|ENSG00000117640|Q9H019-2|MTFR1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3426513671875	2	589.340041	1176.66553	0.82336	0.00048524	4.113	0.002424	4.9364	0.0029092	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.85981	3	11323	11229;11323;11347		35.152	7.2698	1	9460500			15261	2994	10484	10493	17598;17599;17600	17599					0.0842628415668969
HTWKPSPLIV	10	Unmodified	_HTWKPSPLIV_					0	0	0		nc|ENSG00000117640|Q9H019-2|MTFR1L;nc|ENSG00000117640|Q9H019-3|MTFR1L;ENSG00000117640|ENST00000374303|MTFR1L	nc|ENSG00000117640|Q9H019-2|MTFR1L	nc|ENSG00000117640|Q9H019-2|MTFR1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3438110351562	2	589.340041	1176.66553	3.7002	0.0021806	1.783	0.0010508	5.4831	0.0032314	589.3408630817031	104.64	1.3141	104.87	104.2	105.52	0.2268					67	31	4	0	0	0	0.85939	1	12803	12803		23.042	0	1	499450			15262	2994	10484	10493	17601	17601					0.0842628415668969
HTWLVQTG	8	Unmodified	_HTWLVQTG_					0	0	0			REV__ENST00000407558.8_1_16:3534964-3535735:+|nuORF	REV__ENST00000407558.8_1_16:3534964-3535735:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.2417907714844	2	471.245609	940.476666	-0.11027	-5.1965E-05	-3.7858	-0.0017841	-3.8961	-0.001836	471.2436552903768	85.85	3.7163	85.917	84.593	88.309	0.067261					181	85	3	0	0	0	0.88185	2	8562	8562;8575		40.778	6.6056	1	223720	+		15263	25486	10485	10494	17602;17603	17602					0.004046315832511027
HTYCRLPRNLN	11	Unmodified	_HTYCRLPRNLN_					0	0	0		ENST00000464048.1_1_1:153914801-153915527:-|nuORF;ENSG00000198837|ENST00000361217|DENND4B	ENST00000464048.1_1_1:153914801-153915527:-|nuORF	ENST00000464048.1_1_1:153914801-153915527:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	462.258056640625	3	462.906822	1385.69864	-0.50597	-0.00023422	-3.2727	-0.001515	-3.7787	-0.0017492	463.23952618419463	54.954	0.36072	54.928	54.703	55.064	-0.025955					15	10	2	0	0	0	0.1745	1	4976	4976		17.833	12.134	1	141280			15264	8347	10486	10495	17604	17604					0.02121542937106824
HTYGKLLLG	9	Unmodified	_HTYGKLLLG_					0	0	0			REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904052734375	2	501.292559	1000.57057	-0.064942	-3.2555E-05	-4.2261	-0.0021185	-4.291	-0.002151	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.72402	1	8541	8541		38.806	4.6336	1	2854100	+		15265	26420	10487	10496	17605	17605					0.07030350685533904
HTYGKLLLG	9	Unmodified	_HTYGKLLLG_					0	0	0			REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2902526855469	2	501.292559	1000.57057	-0.52377	-0.00026256	-3.845	-0.0019275	-4.3688	-0.00219	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.51307	1	8549	8549		51.335	5.3632	1	2929300	+		15266	26420	10487	10496	17606	17606					0.07030350685533904
HTYGKLLLG	9	Unmodified	_HTYGKLLLG_					0	0	0			REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2905578613281	2	501.292559	1000.57057	-0.36653	-0.00018374	-3.8537	-0.0019318	-4.2202	-0.0021156	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.43338	2	9225	8933;9225		55.504	4.1688	1	9903700	+		15267	26420	10487	10496	17607;17608	17608					0.07030350685533904
HTYGKLLLG	9	Unmodified	_HTYGKLLLG_					0	0	0			REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.290283203125	2	501.292559	1000.57057	-0.50311	-0.0002522	-3.7566	-0.0018832	-4.2597	-0.0021354	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.55097	4	8743	8572;8743;8810;8928		49.442	7.0454	1	10459000	+		15268	26420	10487	10496	17609;17610;17611;17612	17610					0.07030350685533904
HTYGKLLLG	9	Unmodified	_HTYGKLLLG_					0	0	0			REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2903747558594	2	501.292559	1000.57057	-1.5697	-0.00078686	-2.6476	-0.0013272	-4.2173	-0.0021141	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.78536	1	8601	8601		29.15	2.3535	1	9242300	+		15269	26420	10487	10496	17613	17613					0.07030350685533904
HTYGKLLLG	9	Unmodified	_HTYGKLLLG_					0	0	0			REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2904052734375	2	501.292559	1000.57057	-0.28392	-0.00014233	-3.9733	-0.0019918	-4.2572	-0.0021341	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.74721	3	10315	10291;10315;10413		37.159	2.9866	1	9038000	+		15270	26420	10487	10496	17614;17615;17616	17615					0.07030350685533904
HTYGKLLLG	9	Unmodified	_HTYGKLLLG_					0	0	0			REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	REV__ENST00000415279.1_1_1:106434930-106435587:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2904357910156	2	501.292559	1000.57057	-0.45423	-0.0002277	-3.8659	-0.001938	-4.3202	-0.0021657	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.74721	1	10387	10387		37.159	0.71236	1	9727400	+		15271	26420	10487	10496	17617	17617					0.07030350685533904
HTYGLSTYEH	10	Unmodified	_HTYGLSTYEH_					0	0	0			REV__ENST00000476493.5_1_1:33099602-33116090:-|nuORF	REV__ENST00000476493.5_1_1:33099602-33116090:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3665771484375	2	604.272552	1206.53055	-1.2755	-0.00077073	0.018153	1.097E-05	-1.2573	-0.00075976	604.774145949671	104.6	0.15343	104.69	104.55	104.71	0.093857					5	3	2	0	0	0	0.37624	1	11048	11048		34.173	1.3601	1	128350	+		15272	27333	10488	10497	17618	17618					-0.06445240775701677
HTYLANGQTK	10	Unmodified	_HTYLANGQTK_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.7903442382812	2	566.790912	1131.56727	0.96166	0.00054506	-0.86131	-0.00048818	0.10035	5.6876E-05	566.7903425607038	21.672	0.75555	21.229	20.961	21.716	-0.44324					46	17	4	0	0	0	0.13693	3	806	795;806;831		96.665	47.129	1	466070			15273	8948	10489	10498	17619;17620;17621	17620					0.006750558408384677
HTYLANGQTK	10	Unmodified	_HTYLANGQTK_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.791259765625	2	566.790912	1131.56727	0.69297	0.00039277	-0.72544	-0.00041117	-0.032473	-1.8406E-05	566.790412921783	21.89	0.74046	21.265	20.955	21.695	-0.62558					43	18	3	0	0	0	0.31985	1	831	831		70.816	23.159	1	497190			15274	8948	10489	10498	17622	17622					0.006750558408384677
HTYPPVSL	8	Unmodified	_HTYPPVSL_					0	0	0			REV__ENST00000589503.1_1_19:41938138-41938741:-|nuORF	REV__ENST00000589503.1_1_19:41938138-41938741:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2642822265625	2	457.242535	912.470518	-1.2487	-0.00057094	-2.3525	-0.0010757	-3.6012	-0.0016466	457.24132452925295	82.27	0.75314	82.27	81.809	82.563	0					34	18	3	0	0	0	0.4196	1	7668	7668		24.203	7.7296	1	112980	+		15275	29163	10490	10499	17623	17623					0.010781133517184571
HTYPPVSL	8	Unmodified	_HTYPPVSL_					0	0	0			REV__ENST00000589503.1_1_19:41938138-41938741:-|nuORF	REV__ENST00000589503.1_1_19:41938138-41938741:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2637634277344	2	457.242535	912.470518	-1.5191	-0.00069462	-2.7148	-0.0012413	-4.2339	-0.0019359	457.24070803541014	81.107	2.252	81.213	80.311	82.563	0.10553					117	55	3	0	0	0	0.4196	1	7647	7647		24.203	3.7209	1	150830	+		15276	29163	10490	10499	17624	17624					0.010781133517184571
HTYRLISV	8	Unmodified	_HTYRLISV_					0	0	0		ENSG00000134588|ENST00000511190|USP26	ENSG00000134588|ENST00000511190|USP26	ENSG00000134588|ENST00000511190|USP26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7799987792969	2	494.782359	987.550165	-1.4939	-0.00073914	-2.7072	-0.0013395	-4.2011	-0.0020786	494.78084579093485	83.794	2.8854	83.932	82.379	85.265	0.13811					127	66	3	0	0	0	0.85277	1	8070	8070		25.45	2.4077	1	242900			15277	3947	10491	10500	17625	17625					0.055891800257199975
HVAAPYIAK	9	Unmodified	_HVAAPYIAK_					0	0	0		ENSG00000101126|ENST00000621696|ADNP	ENSG00000101126|ENST00000621696|ADNP	ENSG00000101126|ENST00000621696|ADNP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.27923583984375	2	485.279452	968.544351	-0.5881	-0.00028539	2.2987	0.0011155	1.7106	0.0008301	485.2797240073115	31.402	1.346	31.481	30.767	32.113	0.079834					69	30	4	0	0	0	0.19953	6	2104	2099;2104;2120;2132;2144;2156		73.975	22.639	1	1793800			15278	1899	10492	10501	17626;17627;17628;17629;17630;17631	17627					0.058820815140165905
HVAAPYIAK	9	Unmodified	_HVAAPYIAK_					0	0	0		ENSG00000101126|ENST00000621696|ADNP	ENSG00000101126|ENST00000621696|ADNP	ENSG00000101126|ENST00000621696|ADNP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.27923583984375	2	485.279452	968.544351	0.14457	7.0157E-05	1.4441	0.00070078	1.5886	0.00077094	485.2793907764451	31.339	1.203	31.343	30.84	32.043	0.0037212					62	27	4	0	0	0	0.18566	6	2119	2105;2119;2131;2144;2156;2171		76.847	32.73	1	2024500			15279	1899	10492	10501	17632;17633;17634;17635;17636;17637	17633					0.058820815140165905
HVALAFLTAI	10	Unmodified	_HVALAFLTAI_					0	0	0		ENST00000375290.6_3_9:98215758-98232201:-|nuORF;nc|ENSG00000185920|Q13635-4|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-2|PTCH1;ENSG00000185920|ENST00000331920|PTCH1	ENST00000375290.6_3_9:98215758-98232201:-|nuORF	ENST00000375290.6_3_9:98215758-98232201:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.3134765625	2	528.316035	1054.61752	0.80818	0.00042697	-4.3231	-0.002284	-3.5149	-0.001857	528.3138274474713	98.246	1.1968	98.407	97.84	99.037	0.16074					66	26	4	0	0	0	0.86305	1	10197	10197		31.955	1.4512	1	380980			15280	7757	10493	10502	17638	17638					0.09239210236637518
HVALDLLERK	10	Unmodified	_HVALDLLERK_					0	0	0		nc|ENSG00000005381|P05164-2|MPO;ENSG00000005381|ENST00000225275|MPO;nc|ENSG00000005381|P05164-3|MPO	nc|ENSG00000005381|P05164-2|MPO	nc|ENSG00000005381|P05164-2|MPO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8563232421875	2	597.35368	1192.69281	2.4166	0.0014436	0.49195	0.00029387	2.9086	0.0017374	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.60985	1	10018	10018		49.536	15.614	1	8047600			15281	683	10494	10503	17639	17639					0.10416767697074647
HVALDLLERK	10	Unmodified	_HVALDLLERK_					0	0	0		nc|ENSG00000005381|P05164-2|MPO;ENSG00000005381|ENST00000225275|MPO;nc|ENSG00000005381|P05164-3|MPO	nc|ENSG00000005381|P05164-2|MPO	nc|ENSG00000005381|P05164-2|MPO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8558349609375	2	597.35368	1192.69281	0.9357	0.00055895	2.5932	0.001549	3.5289	0.002108	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.80179	1	9556	9556		39.253	5.3312	1	19058000			15282	683	10494	10503	17640	17640					0.10416767697074647
HVALDLLERK	10	Unmodified	_HVALDLLERK_					0	0	0		nc|ENSG00000005381|P05164-2|MPO;ENSG00000005381|ENST00000225275|MPO;nc|ENSG00000005381|P05164-3|MPO	nc|ENSG00000005381|P05164-2|MPO	nc|ENSG00000005381|P05164-2|MPO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.856201171875	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.80179	1	9596	9596		39.253	1.4413	1	18777000			15283	683	10494	10503	17641	17641					0.10416767697074647
HVALSPSVFAL	11	Unmodified	_HVALSPSVFAL_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.828369140625	2	570.824224	1139.63389	0.28979	0.00016542	0.98882	0.00056444	1.2786	0.00072986	570.8247161195649	58.881	1.0315	59.435	59.047	60.079	0.55323					56	25	3	0	0	0	0.6921	1	6215	6215		32.812	1.2826	1	762650	+		15284	21390	10495	10504	17642	17642					0.06966291402773095
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8306274414062	2	553.828786	1105.64302	-0.64285	-0.00035603	2.932	0.0016238	2.2891	0.0012678	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.67608	4	8439	8439;8540;8589;8697		45.952	5.9844	1	1181400	+		15285	23574	10496	10505	17643;17644;17645;17646	17643					0.09442361487435846
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8302612304688	2	553.828786	1105.64302	-0.78391	-0.00043415	3.0209	0.0016731	2.237	0.0012389	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.86305	3	8869	8869;8881;8964		31.955	4.9296	1	1489800	+		15286	23574	10496	10505	17647;17648;17649	17647					0.09442361487435846
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8302001953125	2	553.828786	1105.64302	1.7761	0.00098364	0.48112	0.00026646	2.2572	0.0012501	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.81018	7	9230	9145;9206;9230;9242;9289;9325;9338		38.806	4.9468	1	1628400	+		15287	23574	10496	10505	17650;17651;17652;17653;17654;17655;17656	17652					0.09442361487435846
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8304443359375	2	553.828786	1105.64302	2.0416	0.0011307	0.42617	0.00023602	2.4678	0.0013667	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.84112	4	9647	9576;9600;9635;9647		37.159	12.956	1	5457600	+		15288	23574	10496	10505	17657;17658;17659;17660	17660					0.09442361487435846
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8298950195312	2	553.828786	1105.64302	1.198	0.00066348	1.0602	0.00058716	2.2582	0.0012506	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.86452	4	8966	8966;9050;9122;9230		30.504	6.3009	1	1689700	+		15289	23574	10496	10505	17661;17662;17663;17664	17661					0.09442361487435846
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8305053710938	2	553.828786	1105.64302	1.287	0.00071279	1.2184	0.00067476	2.5054	0.0013876	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.84112	5	9516	9301;9432;9457;9516;9529		37.159	6.6555	1	5348100	+		15290	23574	10496	10505	17665;17666;17667;17668;17669	17668					0.09442361487435846
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8302001953125	2	553.828786	1105.64302	0.74511	0.00041266	1.4676	0.00081279	2.2127	0.0012255	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.81018	1	8872	8872		38.806	1.647	1	2008100	+		15291	23574	10496	10505	17670	17670					0.09442361487435846
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8308715820312	2	553.828786	1105.64302	0.76565	0.00042404	1.7912	0.000992	2.5568	0.001416	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.86201	2	9147	9123;9147		30.504	4.9296	1	6029400	+		15292	23574	10496	10505	17671;17672	17672					0.09442361487435846
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8295288085938	2	553.828786	1105.64302	-1.4375	-0.00079614	3.6733	0.0020344	2.2358	0.0012382	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.86452	2	8693	8693;8753		30.504	3.8107	1	1728300	+		15293	23574	10496	10505	17673;17674	17673					0.09442361487435846
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8308715820312	2	553.828786	1105.64302	-1.4397	-0.00079733	3.9475	0.0021862	2.5078	0.0013889	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.85939	2	9123	8897;9123		30.504	2.4222	1	5453100	+		15294	23574	10496	10505	17675;17676	17676					0.09442361487435846
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8319702148438	2	553.828786	1105.64302	0.84671	0.00046893	2.1445	0.0011877	2.9912	0.0016566	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.47599	2	10905	10616;10905		57.811	24.999	1	5381700	+		15295	23574	10496	10505	17677;17678	17678					0.09442361487435846
HVAPILRVAM	10	Unmodified	_HVAPILRVAM_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.830322265625	2	553.828786	1105.64302	-1.3791	-0.00076379	4.3377	0.0024024	2.9586	0.0016386	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.81018	2	10708	10686;10708		38.806	15.199	1	5911200	+		15296	23574	10496	10505	17679;17680	17680					0.09442361487435846
HVARIPLP	8	Unmodified	_HVARIPLP_					0	0	0		nc|ENSG00000160285|P48449-2|LSS;nc|ENSG00000160285|P48449-3|LSS;ENSG00000160285|ENST00000397728|LSS	nc|ENSG00000160285|P48449-2|LSS	nc|ENSG00000160285|P48449-2|LSS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.77984619140625	2	451.782162	901.549771	-1.1973	-0.00054094	-3.2538	-0.00147	-4.4512	-0.002011	451.7806721299916	86.886	1.0382	86.886	86.517	87.555	0					40	23	2	0	0	0	0.81724	1	8320	8320		14.664	2.4572	1	157750			15297	5574	10497	10506	17681	17681					0.09505805096512177
HVAVKRGK	8	Unmodified	_HVAVKRGK_					0	0	0			REV__ENSG00000128513|ENST00000357628|POT1	REV__ENSG00000128513|ENST00000357628|POT1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.7739562988281	2	447.785236	893.555919	-0.11136	-4.9866E-05	4.16	0.0018628	4.0486	0.0018129	447.7870068146635	41.093	2.4921	41.048	40.013	42.505	-0.045467					130	81	2	0	0	0	0.4196	1	2639	2639		13.775	6.085	1	858500	+		15298	18775	10498	10507	17682	17682					0.10488323328036131
HVCLLWHY	8	Unmodified	_HVCLLWHY_					0	0	0		L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|85|3|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|85|3|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|85|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.3299560546875	2	535.765655	1069.51676	-0.26567	-0.00014234	-0.6135	-0.00032869	-0.87917	-0.00047103	535.7651939368557	32.134	0.8588	32.261	31.775	32.634	0.12643					37	19	3	0	0	0	0.4196	1	2180	2180		24.504	0	1	227540			15299	14642	10499	10508	17683	17683					-0.015221450178387386
HVCLRIKPP	9	Unmodified	_HVCLRIKPP_					0	0	0			REV__ENSG00000129933|ENST00000262815|MAU2	REV__ENSG00000129933|ENST00000262815|MAU2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8173828125	2	531.815679	1061.6168	2.2467	0.0011948	0.47914	0.00025481	2.7258	0.0014496	531.815856548035	100.88	1.2769	101.22	100.19	101.46	0.34591					70	31	4	0	0	0	0.7932	1	12279	12279		25.45	4.5032	1	649570	+		15300	18837	10500	10509	17684	17684					0.08846092315934584
HVCVACAC	8	Unmodified	_HVCVACAC_					0	0	0			REV__ENST00000430767.8_1_17:75211123-75211297:+|nuORF	REV__ENST00000430767.8_1_17:75211123-75211297:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5749206542969	2	403.161319	804.308085	1.1331	0.00045682	1.661	0.00066964	2.7941	0.0011265	403.161958646737	79.093	0.59588	79.503	79.311	79.907	0.4106					20	13	2	0	0	0	0.4196	1	9092	9092		24.504	21.575	1	125900	+		15301	26610	10501	10510	17685	17685					-0.10189632917956715
HVCVACAC	8	Unmodified	_HVCVACAC_					0	0	0			REV__ENST00000430767.8_1_17:75211123-75211297:+|nuORF	REV__ENST00000430767.8_1_17:75211123-75211297:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	403.161319	804.308085	-0.18761	-7.5637E-05	3.3068	0.0013332	3.1192	0.0012575	403.16251525004236	79.819	0.40585	79.878	79.76	80.166	0.059357	0.16884	0.00057393	NaN	24.504	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30146	+		15302	26610	10501	10510							-0.10189632917956715
HVCVACAC	8	Unmodified	_HVCVACAC_					0	0	0			REV__ENST00000430767.8_1_17:75211123-75211297:+|nuORF	REV__ENST00000430767.8_1_17:75211123-75211297:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	403.161319	804.308085	-1.8299	-0.00073773	4.6248	0.0018645	2.7949	0.0011268	403.16295503669375	79.698	0.39185	79.828	79.601	79.993	0.13085	0.1194	0.0016366	NaN	24.504	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31109	+		15303	26610	10501	10510							-0.10189632917956715
HVCVACAC	8	Unmodified	_HVCVACAC_					0	0	0			REV__ENST00000430767.8_1_17:75211123-75211297:+|nuORF	REV__ENST00000430767.8_1_17:75211123-75211297:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	403.161319	804.308085	0.54314	0.00021897	2.1463	0.00086532	2.6895	0.0010843	403.1621948642793	79.655	0.30301	79.796	79.572	79.875	0.14117	0.087295	-0.00036175	NaN	24.504	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40117	+		15304	26610	10501	10510							-0.10189632917956715
HVDICKTI	8	Unmodified	_HVDICKTI_					0	0	0			REV__ENSG00000096696|ENST00000379802|DSP	REV__ENSG00000096696|ENST00000379802|DSP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.74835205078125	2	464.74967	927.484787	0.42856	0.00019917	-3.8072	-0.0017694	-3.3786	-0.0015702	464.7476979311871	27.467	0.4567	27.508	27.277	27.733	0.040834					26	14	3	0	0	0	0.884	1	1239	1239		33.516	3.0119	1	54961	+		15305	17077	10502	10511	17686	17686					0.018144425083505666
HVDMQPCGPL	10	Unmodified	_HVDMQPCGPL_					0	0	0		ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.7489624023438	2	548.749344	1095.48414	0.039064	2.1437E-05	-0.7429	-0.00040766	-0.70383	-0.00038623	548.7488171682446	53.675	0.83237	53.65	53.272	54.104	-0.024754					52	19	4	0	0	0	0.30722	3	4799	4787;4799;4810		71.877	7.7735	1	838800			15306	2153	10503	10512	17687;17688;17689	17688					-0.0597872020300656
HVDMQPCGPL	10	Unmodified	_HVDMQPCGPL_					0	0	0		ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.7501831054688	2	548.749344	1095.48414	-0.26026	-0.00014282	-0.80365	-0.000441	-1.0639	-0.00058382	548.7488661429273	54.514	0.75417	54.92	54.615	55.369	0.40663					50	17	4	0	0	0	0.54701	1	5558	5558		52.937	6.9645	1	891460			15307	2153	10503	10512	17690	17690					-0.0597872020300656
HVDPENFR	8	Unmodified	_HVDPENFR_					0	0	0		CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	507.2456359863281	2	507.243598	1012.47264	-0.47665	-0.00024178	0.13586	6.8915E-05	-0.34078	-0.00017286	507.24346806245677	31.26	0.63998	31.249	30.876	31.516	-0.010656					25	14	2	0	0	0	0.93293	1	1682	1682		51.335	7.2187	1	87905		+	15308	8826;620	10504	10513	17691	17691					-0.033094579104840705
HVDTLGIFGD	10	Unmodified	_HVDTLGIFGD_					0	0	0		nc|ENSG00000133317|Q96DT0-4|LGALS12;nc|ENSG00000133317|Q96DT0-2|LGALS12;ENSG00000133317|ENST00000394618|LGALS12;nc|ENSG00000133317|Q96DT0-6|LGALS12;nc|ENSG00000133317|Q96DT0-3|LGALS12;nc|ENSG00000133317|Q96DT0|LGALS12;nc|ENSG00000133317|Q96DT0-7|LGALS12	nc|ENSG00000133317|Q96DT0-4|LGALS12	nc|ENSG00000133317|Q96DT0-4|LGALS12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	537.2650146484375	2	537.266739	1072.51892	0.11757	6.3164E-05	-0.31128	-0.00016724	-0.19371	-0.00010408	537.2664714658966	31.829	0.66216	31.84	31.579	32.241	0.0109					31	17	3	0	0	0	0.85934	1	1763	1763		35.618	0	1	177490			15309	3873	10505	10514	17692	17692					-0.014434377990482972
HVFGLRSH	8	Unmodified	_HVFGLRSH_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.759765625	2	476.759218	951.503883	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.332	1	24.332	23.832	24.832	0								0	0	0	0.29199	1	825	825		29.842	0.69198	1				15310	8813	10506	10515	17693	17693					0.0261915991427486
HVFHLSGT	8	Unmodified	_HVFHLSGT_					0	0	0			REV__ENST00000602712.2_1_10:45956576-46028659:-|nuORF	REV__ENST00000602712.2_1_10:45956576-46028659:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2320861816406	2	449.232502	896.450451	-1.619	-0.00072729	-2.5262	-0.0011349	-4.1452	-0.0018622	449.23133844286133	83.319	3.7519	83.457	82.118	85.87	0.13811					166	86	3	0	0	0	0.86791	1	8041	8041		28.254	0.37203	1	160270	+		15311	29334	10507	10516	17694	17694					-0.0019163758823879107
HVFRKKNRREV	11	Unmodified	_HVFRKKNRREV_					0	0	0		nc|ENSG00000010379|Q9NSD5-2|SLC6A13;ENSG00000010379|ENST00000343164|SLC6A13	nc|ENSG00000010379|Q9NSD5-2|SLC6A13	nc|ENSG00000010379|Q9NSD5-2|SLC6A13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.21624755859375	3	490.291776	1467.8535	-1.2532	-0.00061445	2.861	0.0014027	1.6077	0.00078826	490.2931309757549	29.579	0.39047	29.549	29.257	29.647	-0.029207					13	8	2	0	0	0	0.17835	1	1841	1841		16.53	2.4438	1	54645			15312	768	10508	10517	17695	17695					0.13828535133825426
HVGDEILEI	9	Unmodified	_HVGDEILEI_					0	0	0		nc|ENSG00000130830|Q00013-2|MPP1;nc|ENSG00000130830|Q00013-3|MPP1;ENSG00000130830|ENST00000369534|MPP1	nc|ENSG00000130830|Q00013-2|MPP1	nc|ENSG00000130830|Q00013-2|MPP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.7709350585938	2	512.769114	1023.52368	-0.0082937	-4.2528E-06	1.4585	0.00074787	1.4502	0.00074362	512.7695513621228	30.134	0.87141	30.091	29.824	30.696	-0.043095					46	20	4	0	0	0	0.77546	1	1652	1652		31.955	7.7521	1	166890			15313	3692	10509	10518	17696	17696					0.01285446343717922
HVGGVMLKL	9	Oxidation (M)	_HVGGVM(Oxidation (M))LKL_		HVGGVM(1)LKL		HVGGVM(41)LKL	0	0	1		nc|ENSG00000101311|Q9BQL6-4|FERMT1;nc|ENSG00000101311|Q9BQL6-2|FERMT1;ENSG00000101311|ENST00000217289|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.28143310546875	2	485.281137	968.547722	-0.5881	-0.00028539	-1.1744	-0.00056991	-1.7625	-0.00085531	485.2797240073115	31.402	1.346	31.481	30.767	32.113	0.079834					69	30	4	0	0	0	0.69914	1	2171	2171		40.573	7.057	1	1793800			15314	14821	10510	10519	17697	17697		212			0.06219008296386619
HVGPLHLE	8	Unmodified	_HVGPLHLE_					0	0	0			REV__nc|ENSG00000171608|O00329-2|PIK3CD	REV__nc|ENSG00000171608|O00329-2|PIK3CD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.2466125488281	2	451.248152	900.481751	-1.2821	-0.00057856	2.6153	0.0011801	1.3331	0.00060157	451.2491871267672	67.547	1.2746	67.683	67.257	68.531	0.13522					88	48	2	0	0	0	0.89457	1	6039	6039		37.028	1.8278	1	186190	+		15315	30027	10511	10520	17698	17698					0.02752935445857929
HVGQGGEGIK	10	Unmodified	_HVGQGGEGIK_					0	0	0			REV__ENST00000551688.1_1_12:101790345-101801520:-|nuORF	REV__ENST00000551688.1_1_12:101790345-101801520:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.7137756347656	2	491.259248	980.503943	0.7453	0.00036614	2.0863	0.0010249	2.8316	0.0013911	491.2603475023953	95.164	2.5078	95.327	94.37	96.878	0.16307					99	59	3	0	0	0	0.37624	1	9850	9850		36.447	9.6506	1	352740	+		15316	24398	10512	10521	17699	17699					0.012911151236039586
HVGQVMTK	8	Unmodified	_HVGQVMTK_					0	0	0		ENSG00000144229|ENST00000409968|THSD7B	ENSG00000144229|ENST00000409968|THSD7B	ENSG00000144229|ENST00000409968|THSD7B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.25823974609375	2	450.242012	898.469472	2.5457	0.0011462	4.4193	0.0019897	6.965	0.0031359	450.243947395396	25.978	0.30183	25.547	25.439	25.741	-0.4311					10	6	2	0	0	0	0.4196	1	1387	1387		63.306	0	1	82416			15317	4697	10513	10522	17700	17700					0.0161757571115686
HVGSGRLN	8	Unmodified	_HVGSGRLN_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1;REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2272033691406	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.89962	1	7323	7323		38.806	3.6054	1	419890	+		15318	17833;21287	10514	10523	17701	17701					0.015265941262100569
HVIIPTHLP	9	Unmodified	_HVIIPTHLP_					0	0	0			REV__ENSG00000076201|ENST00000265562|PTPN23	REV__ENSG00000076201|ENST00000265562|PTPN23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.808837890625	2	513.808377	1025.6022	-0.15906	-8.1728E-05	1.3381	0.00068753	1.179	0.0006058	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.77546	1	3808	3808		31.955	6.5047	1	1484700	+		15319	16723	10515	10524	17702	17702					0.09042343439477918
HVILHSKKSFT	11	Unmodified	_HVILHSKKSFT_					0	0	0			REV__ENSG00000147118|ENST00000376943|ZNF182	REV__ENSG00000147118|ENST00000376943|ZNF182	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.8724975585938	2	648.874779	1295.73501	-1.1412	-0.00074051	-3.9063	-0.0025347	-5.0475	-0.0032752	648.8725280227517	99.334	2.2334	99.52	98.635	100.87	0.18582					120	51	3	0	0	0	0.61369	1	10323	10323		42.864	1.4377	1	245270	+		15320	20051	10516	10525	17703	17703					0.09896743105446149
HVIRALIKQLK	11	Unmodified	_HVIRALIKQLK_					0	0	0		nc|ENSG00000270379|A2RTY3-5|HEATR9;nc|ENSG00000270379|A2RTY3-4|HEATR9;nc|ENSG00000270379|A2RTY3-3|HEATR9;ENSG00000270379|ENST00000604834|HEATR9	nc|ENSG00000270379|A2RTY3-5|HEATR9	nc|ENSG00000270379|A2RTY3-5|HEATR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2913513183594	3	440.294235	1317.86087	-0.14762	-6.4996E-05	-4.0558	-0.0017858	-4.2034	-0.0018507	440.29224154688933	58.12	1.3783	58.106	57.522	58.9	-0.013641					131	47	4	0	0	0	0.7896	1	5277	5277		13.508	2.9211	1	235220			15321	8974	10517	10526	17704	17704					0.21465874681530295
HVIRALIKQLK	11	Unmodified	_HVIRALIKQLK_					0	0	0		nc|ENSG00000270379|A2RTY3-5|HEATR9;nc|ENSG00000270379|A2RTY3-4|HEATR9;nc|ENSG00000270379|A2RTY3-3|HEATR9;ENSG00000270379|ENST00000604834|HEATR9	nc|ENSG00000270379|A2RTY3-5|HEATR9	nc|ENSG00000270379|A2RTY3-5|HEATR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.6268005371094	3	440.294235	1317.86087	-0.12551	-5.5261E-05	-4.0795	-0.0017962	-4.205	-0.0018514	440.29228151572136	58.121	1.3606	58.091	57.557	58.917	-0.029865					98	39	4	0	0	0	0.77511	1	5364	5364		16.53	7.3181	1	263280			15322	8974	10517	10526	17705	17705					0.21465874681530295
HVIRALIKQLK	11	Unmodified	_HVIRALIKQLK_					0	0	0		nc|ENSG00000270379|A2RTY3-5|HEATR9;nc|ENSG00000270379|A2RTY3-4|HEATR9;nc|ENSG00000270379|A2RTY3-3|HEATR9;ENSG00000270379|ENST00000604834|HEATR9	nc|ENSG00000270379|A2RTY3-5|HEATR9	nc|ENSG00000270379|A2RTY3-5|HEATR9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2930908203125	3	440.294235	1317.86087	-1.4987	-0.00065986	-2.6745	-0.0011776	-4.1732	-0.0018374	440.29287290347224	59.592	1.1212	59.686	59.191	60.312	0.094063					94	32	4	0	0	0	0.79224	1	5113	5113		12.957	2.3707	1	285330			15323	8974	10517	10526	17706	17706					0.21465874681530295
HVITLGLVGL	10	Unmodified	_HVITLGLVGL_					0	0	0		ENSG00000128059|ENST00000264220|PPAT	ENSG00000128059|ENST00000264220|PPAT	ENSG00000128059|ENST00000264220|PPAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.32696533203125	2	511.32386	1020.63317	2.4721	0.001264	3.8453	0.0019662	6.3174	0.0032303	511.3257127043103	97.291	2.1515	97.235	96.802	98.953	-0.055542					136	49	4	0	0	0	0.86589	1	10480	10480		29.15	1.2673	1	1837000			15324	3530	10518	10527	17707	17707					0.12367496753722662
HVKAKKAHTAS	11	Unmodified	_HVKAKKAHTAS_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3423461914062	2	589.343646	1176.67274	0.81285	0.00047905	-2.3819	-0.0014037	-1.569	-0.00092468	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.7434	1	9177	9177		23.523	0.94304	1	6450100			15325	5428	10519	10528	17708	17708					0.09147016757151505
HVKAKKAHTAS	11	Unmodified	_HVKAKKAHTAS_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3428955078125	2	589.343646	1176.67274	0.82336	0.00048524	-2.0045	-0.0011814	-1.1812	-0.00069612	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.65746	1	11456	11456		37.812	7.4938	1	9460500			15326	5428	10519	10528	17709	17709					0.09147016757151505
HVKAKKAHTAS	11	Unmodified	_HVKAKKAHTAS_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.343017578125	2	589.343646	1176.67274	0.15554	9.1664E-05	-1.2615	-0.00074348	-1.106	-0.00065182	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.73893	1	11395	11395		24.519	0	1	10540000			15327	5428	10519	10528	17710	17710					0.09147016757151505
HVKDANGNSF	10	Unmodified	_HVKDANGNSF_					0	0	0		ENST00000470671.1_1_X:71475533-71493153:-|nuORF;ENSG00000280969|ENST00000629237|RPS4Y2;ENSG00000198034|ENST00000316084|RPS4X;ENSG00000129824|ENST00000250784|RPS4Y1	ENST00000470671.1_1_X:71475533-71493153:-|nuORF	ENST00000470671.1_1_X:71475533-71493153:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.759765625	2	544.759612	1087.50467	-1.6839	-0.00091731	1.9049	0.0010377	0.22106	0.00012043	544.7604414706941	20.63	0.56047	20.63	20.424	20.985	0					56	26	3	0	0	0	0.2575	2	517	511;517		77.318	18.536	1	129540			15328	3606	10520	10529	17711;17712	17712					-0.03558090227329558
HVKIGDFGLA	10	Unmodified	_HVKIGDFGLA_					0	0	0		ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.7916259765625	2	528.795466	1055.57638	-1.5408	-0.00081478	-2.3886	-0.0012631	-3.9294	-0.0020778	528.7940819687291	36.232	0.98741	36.232	35.879	36.867	0					58	23	4	0	0	0	0.71042	1	2061	2061		44.117	2.6902	1	756220			15329	3562	10521	10530	17713	17713					0.0508144919717779
HVKILRSSDLK	11	Unmodified	_HVKILRSSDLK_					0	0	0			REV__ENST00000484240.1_1_17:44798950-44799232:-|nuORF	REV__ENST00000484240.1_1_17:44798950-44799232:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	647.8644409179688	2	648.393336	1294.77212	0.94439	0.00061234	-4.1165	-0.0026691	-3.1721	-0.0020568	648.390222480516	113.88	0.14615	113.94	113.86	114.01	0.063232					8	5	2	0	0	0	0.17385	1	12195	12195		13.454	0	1	1402300	+		15330	27507	10522	10531	17714	17714					0.13652414651232903
HVKILRSSDLK	11	Unmodified	_HVKILRSSDLK_					0	0	0			REV__ENST00000484240.1_1_17:44798950-44799232:-|nuORF	REV__ENST00000484240.1_1_17:44798950-44799232:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.392578125	2	648.393336	1294.77212	-1.1413	-0.00074	0.13726	8.8996E-05	-1.004	-0.000651	648.3933115061765	106.13	0.94215	106.19	105.71	106.65	0.053757					81	22	4	0	0	0	0.68532	1	11260	11260		33.922	3.6039	1	40329000	+		15331	27507	10522	10531	17715	17715					0.13652414651232903
HVKLLPLAAS	10	Unmodified	_HVKLLPLAAS_					0	0	0		ENSG00000173825|ENST00000309880|TIGD3	ENSG00000173825|ENST00000309880|TIGD3	ENSG00000173825|ENST00000309880|TIGD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8262939453125	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.85466	2	10598	10566;10598		29.15	7.4472	1	23918000			15332	6888	10523	10532	17716;17717	17717					0.12214899127980061
HVKPDVSE	8	Unmodified	_HVKPDVSE_					0	0	0		ENSG00000116711|ENST00000367466|PLA2G4A	ENSG00000116711|ENST00000367466|PLA2G4A	ENSG00000116711|ENST00000367466|PLA2G4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.73577880859375	2	455.735074	909.455596	-0.28016	-0.00012768	0.7572	0.00034508	0.47704	0.0002174	455.7350341748715	31.996	0.90005	31.945	31.642	32.542	-0.051033					37	19	4	0	0	0	0.8537	1	1852	1852		25.574	2.5316	1	93087			15333	2940	10524	10533	17718	17718					-0.0027537851627812415
HVKRESVLR	9	Unmodified	_HVKRESVLR_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.3410034179688	2	562.338364	1122.66217	0.9674	0.00054401	-0.74652	-0.0004198	0.22088	0.00012421	562.3377800736213	16.862	0.5685	16.374	16.052	16.62	-0.48718					22	12	3	0	0	0	0.76764	1	196	196		34.173	8.5985	1	76447	+		15334	20437;29946;29947	10525	10534	17719	17719					0.10575034102703285
HVKTVQIPP	9	Unmodified	_HVKTVQIPP_					0	0	0			REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8035583496094	2	509.805834	1017.59712	-1.4574	-0.000743	-2.7703	-0.0014123	-4.2277	-0.0021553	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.7932	1	8296	8296		23.042	1.3402	1	920080	+		15335	23137	10526	10535	17720	17720					0.08902039576844345
HVLCVTQQLRN	11	Unmodified	_HVLCVTQQLRN_					0	0	0		nc|ENSG00000042813|Q9BS86-2|ZPBP;ENSG00000042813|ENST00000046087|ZPBP	nc|ENSG00000042813|Q9BS86-2|ZPBP	nc|ENSG00000042813|Q9BS86-2|ZPBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2407531738281	3	437.571439	1309.69249	0.14053	6.1493E-05	-3.4225	-0.0014976	-3.282	-0.0014361	437.569795972988	34.491	0.53151	34.6	34.322	34.853	0.10829					55	23	3	0	0	0	0.74771	1	1738	1738		22.562	0.78116	1	195820			15336	14745	10527	10536	17721	17721					0.05003024705592907
HVLDTLHP	8	Unmodified	_HVLDTLHP_					0	0	0		nc|ENSG00000105289|O95049-5|TJP3;ENSG00000105289|ENST00000541714|TJP3;nc|ENSG00000105289|O95049-4|TJP3;nc|ENSG00000105289|O95049-3|TJP3	nc|ENSG00000105289|O95049-5|TJP3	nc|ENSG00000105289|O95049-5|TJP3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2545471191406	2	466.253434	930.492316	-1.5133	-0.00070558	2.5281	0.0011787	1.0148	0.00047317	466.2545098406443	61.17	1.13	61.17	60.102	61.232	0					111	49	3	0	0	0	0.88915	1	5351	5351		35.201	6.0512	1	374960			15337	2200	10528	10537	17722	17722					0.024289181002814075
HVLGRAGLQR	10	Unmodified	_HVLGRAGLQR_					0	0	0		ENST00000295404.9_1_19:50194996-50204826:+|nuORF	ENST00000295404.9_1_19:50194996-50204826:+|nuORF	ENST00000295404.9_1_19:50194996-50204826:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8314819335938	2	553.830706	1105.64686	-1.3791	-0.00076379	0.87112	0.00048245	-0.50797	-0.00028133	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.86201	1	10655	10655		24.203	4.206	1	5911200			15338	9719	10529	10538	17723	17723					0.09826167305504896
HVLHLEPG	8	Unmodified	_HVLHLEPG_					0	0	0		ENSG00000010319|ENST00000231721|SEMA3G	ENSG00000010319|ENST00000231721|SEMA3G	ENSG00000010319|ENST00000231721|SEMA3G	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2465515136719	2	451.248152	900.481751	-0.60944	-0.00027501	2.0486	0.00092444	1.4392	0.00064943	451.24890898084885	67.67	1.2739	67.634	67.25	68.524	-0.035698					111	49	3	0	0	0	0.89457	1	6537	6537		37.028	3.5129	1	185140			15339	766	10530	10539	17724	17724					0.02752935445857929
HVLKLNLSKR	10	Unmodified	_HVLKLNLSKR_					0	0	0		ENST00000524003.1_1_8:92080924-92081077:-|nuORF	ENST00000524003.1_1_8:92080924-92081077:-|nuORF	ENST00000524003.1_1_8:92080924-92081077:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2467956542969	3	403.259302	1206.75608	-0.18598	-7.4997E-05	4.253	0.0017151	4.067	0.0016401	403.2605313334995	104.96	0.20504	104.95	104.86	105.07	-0.014809					7	4	2	0	0	0	0.37624	1	11344	11344		10.104	2.2994	1	24456			15340	13208	10531	10540	17725	17725					0.16096753204965353
HVLLVDQE	8	Unmodified	_HVLLVDQE_					0	0	0			REV__ENST00000578001.1_1_17:27182052-27185217:+|nuORF	REV__ENST00000578001.1_1_17:27182052-27185217:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.7586669921875	2	476.758549	951.502546	-0.27895	-0.00013299	0.50648	0.00024147	0.22753	0.00010848	476.7586662154682	24.262	0.92163	24.216	23.918	24.84	-0.04598					41	20	3	0	0	0	0.79403	1	923	923		63.306	6.5852	1	107860	+		15341	19014	10532	10541	17726	17726					0.0248548103485291
HVLLVDQE	8	Unmodified	_HVLLVDQE_					0	0	0			REV__ENST00000578001.1_1_17:27182052-27185217:+|nuORF	REV__ENST00000578001.1_1_17:27182052-27185217:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.7584228515625	2	476.758549	951.502546	-0.64938	-0.0003096	0.86844	0.00041404	0.21905	0.00010444	476.7588362397882	24.297	0.92221	24.253	23.91	24.832	-0.043222					40	20	3	0	0	0	0.9295	1	888	888		55.504	5.4797	1	124730	+		15342	19014	10532	10541	17727	17727					0.0248548103485291
HVLRELKQVS	10	Unmodified	_HVLRELKQVS_					0	0	0		nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;ENSG00000133816|ENST00000683283|MICAL2	nc|ENSG00000133816|O94851|MICAL2	nc|ENSG00000133816|O94851|MICAL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.57464599609375	3	403.575178	1207.70371	0.56211	0.00022685	-1.4705	-0.00059345	-0.90837	-0.00036659	403.57452270455985	81.745	1.4637	81.891	80.868	82.331	0.14551					81	33	4	0	0	0	0.86207	1	7721	7721		24.232	3.1996	1	2051300			15343	14929	10533	10542	17728	17728					0.10816170071370834
HVMSFRVEP	9	Oxidation (M)	_HVM(Oxidation (M))SFRVEP_		HVM(1)SFRVEP		HVM(57)SFRVEP	0	0	1			REV__nc|ENSG00000125912|Q969V3-2|NCLN	REV__nc|ENSG00000125912|Q969V3-2|NCLN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	559.275146484375	2	559.276583	1116.53861	-1.2644	-0.00070716	-2.9463	-0.0016478	-4.2107	-0.0023549	559.274718637876	44.23	0.84392	44.23	43.858	44.702	0					38	19	3	0	0	0	0.41566	1	3171	3171		56.721	12.604	1	246890	+		15344	18682	10534	10543	17729	17729		271			-0.014993850599239522
HVNLSVKSK	9	Unmodified	_HVNLSVKSK_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.30035400390625	2	506.300916	1010.58728	2.2899	0.0011594	-2.1661	-0.0010967	0.12389	6.2724E-05	506.2997439327226	96.465	1.166	96.408	95.894	97.06	-0.056389					72	26	3	0	0	0	0.77244	1	10394	10394		32.812	1.2826	1	446160			15345	4726	10535	10544	17730	17730					0.0824085157147465
HVPFKLAKS	9	Unmodified	_HVPFKLAKS_					0	0	0			REV__ENSG00000225614|ENST00000565624|ZNF469	REV__ENSG00000225614|ENST00000565624|ZNF469	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.80859375	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.72402	1	3935	3935		38.806	8.3025	1	1550000	+		15346	23739	10536	10545	17731	17731					0.09042343439477918
HVPGLEDK	8	Unmodified	_HVPGLEDK_					0	0	0			REV__ENSG00000120329|ENST00000239451|SLC25A2	REV__ENSG00000120329|ENST00000239451|SLC25A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7381591796875	2	447.737617	893.460681	-1.2161	-0.0005445	2.8581	0.0012797	1.642	0.00073519	447.7387518269618	27.765	1.0003	27.668	27.183	28.184	-0.096947					35	22	3	0	0	0	0.9295	1	1628	1628		55.504	13.03	1	235940	+		15347	18409	10537	10546	17732	17732					0.009689253463307068
HVPIRLPRTKH	11	Unmodified	_HVPIRLPRTKH_					0	0	0		nc|ENSG00000111142|P50579-3|METAP2;nc|ENSG00000111142|P50579-2|METAP2;chr12:95483280-95485948|60|10.08|0.47|4.42|+|ENST00000546753|METAP2,METAP2;ENSG00000111142|ENST00000323666|METAP2	nc|ENSG00000111142|P50579-3|METAP2	nc|ENSG00000111142|P50579-3|METAP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9435119628906	3	451.945717	1352.81532	-1.6541	-0.00074756	-3.5317	-0.0015961	-5.1858	-0.0023437	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.76579	1	4752	4752		18.531	0.69791	1	430100			15348	147	10538	10547	17733	17733					0.15302649219165687
HVPPGPLQS	9	Unmodified	_HVPPGPLQS_					0	0	0		ENST00000418309.1_1_7:156396604-156398412:-|nuORF;ENST00000440711.1_1_7:156397865-156398412:-|nuORF;ENST00000447933.5_1_7:156265368-156398412:-|nuORF	ENST00000418309.1_1_7:156396604-156398412:-|nuORF	ENST00000418309.1_1_7:156396604-156398412:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.25421142578125	2	466.253434	930.492316	-1.4812	-0.00069062	2.8638	0.0013352	1.3825	0.00064462	466.2546647596287	63.114	1.6104	63.114	62.32	63.93	0					124	75	2	0	0	0	0.77546	1	5544	5544		31.955	8.9124	1	225480			15349	11420	10539	10548	17734	17734					0.024289181002814075
HVPQQNGFS	9	Unmodified	_HVPQQNGFS_					0	0	0		nc|ENSG00000172403|Q9UMS6-5|SYNPO2;nc|ENSG00000172403|Q9UMS6|SYNPO2;nc|ENSG00000172403|Q9UMS6-3|SYNPO2;nc|ENSG00000172403|Q9UMS6-4|SYNPO2;ENSG00000172403|ENST00000307142|SYNPO2	nc|ENSG00000172403|Q9UMS6-5|SYNPO2	nc|ENSG00000172403|Q9UMS6-5|SYNPO2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.7935485839844	2	507.243598	1012.47264	1.1655	0.00059122	-1.0683	-0.0005419	0.097214	4.9311E-05	507.2423292809572	31.32	0.30065	31.324	31.101	31.402	0.0037193					9	6	2	0	0	0	0.20789	1	2134	2134		40.573	31.102	1	56394			15350	6769	10540	10549	17735	17735					-0.03309457910472702
HVPQQNGFS	9	Unmodified	_HVPQQNGFS_					0	0	0		nc|ENSG00000172403|Q9UMS6-5|SYNPO2;nc|ENSG00000172403|Q9UMS6|SYNPO2;nc|ENSG00000172403|Q9UMS6-3|SYNPO2;nc|ENSG00000172403|Q9UMS6-4|SYNPO2;ENSG00000172403|ENST00000307142|SYNPO2	nc|ENSG00000172403|Q9UMS6-5|SYNPO2	nc|ENSG00000172403|Q9UMS6-5|SYNPO2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	507.243598	1012.47264	-0.51857	-0.00026304	0.24789	0.00012574	-0.27069	-0.0001373	507.2433835801384	31.174	0.38051	31.233	31.072	31.452	0.05867	-0.056072	0.000346	NaN	29.15	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30181			15351	6769	10540	10549							-0.03309457910472702
HVPRRLVLLH	10	Unmodified	_HVPRRLVLLH_					0	0	0			REV__ENST00000555701.5_1_14:97018895-97018937:+|nuORF	REV__ENST00000555701.5_1_14:97018895-97018937:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.9325866699219	3	413.931408	1238.77239	-0.30793	-0.00012746	3.531	0.0014616	3.223	0.0013341	413.9329171146817	43.07	1.6523	43.019	41.913	43.565	-0.050308					85	44	2	0	0	0	0.85633	1	2955	2955		21.686	0	1	357350	+		15352	28686	10541	10550	17736	17736					0.1625587916173572
HVPVQPQAL	9	Unmodified	_HVPVQPQAL_					0	0	0			REV__ENST00000377191.4_1_20:21283966-21306951:+|nuORF	REV__ENST00000377191.4_1_20:21283966-21306951:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7797546386719	2	494.782359	987.550165	-1.4939	-0.00073914	-2.7072	-0.0013395	-4.2011	-0.0020786	494.78084579093485	83.794	2.8854	83.932	82.379	85.265	0.13811					127	66	3	0	0	0	0.76996	1	8022	8022		33.516	5.2613	1	242900	+		15353	25859	10542	10551	17737	17737					0.05589180025708629
HVQAIAGLE	9	Unmodified	_HVQAIAGLE_					0	0	0			REV__nc|ENSG00000113657|Q14195|DPYSL3	REV__nc|ENSG00000113657|Q14195|DPYSL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	469.2591247558594	2	469.258717	936.50288	-0.21471	-0.00010075	0.56692	0.00026603	0.35221	0.00016528	469.258843652114	25.622	0.74992	25.589	25.307	26.057	-0.032125					48	23	3	0	0	0	0.72402	1	1033	1033		38.806	0	1	142410	+		15354	18007	10543	10552	17738	17738					0.032089007547028814
HVQDLQEVSSL	11	Unmodified	_HVQDLQEVSSL_					0	0	0			REV__nc|ENSG00000070540|Q5MNZ9-2|WIPI1	REV__nc|ENSG00000070540|Q5MNZ9-2|WIPI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	627.8201904296875	2	627.819867	1253.62518	-0.90656	-0.00056916	-0.2388	-0.00014993	-1.1454	-0.00071908	627.8196656261982	44.074	0.59366	44.074	43.823	44.416	0					22	13	2	0	0	0	0.732	1	3159	3159		26.063	0.61321	1	184610	+		15355	16604	10544	10553	17739	17739					0.008512729756375848
HVQGLLHE	8	Unmodified	_HVQGLLHE_					0	0	0		nc|ENSG00000169682|Q9H2V7-4|SPNS1;ENSG00000169682|ENST00000311008|SPNS1;ENST00000569969.5_2_16:28993554-28995617:+|nuORF;nc|ENSG00000169682|Q9H2V7-3|SPNS1;nc|ENSG00000169682|Q9H2V7-2|SPNS1	nc|ENSG00000169682|Q9H2V7-4|SPNS1	nc|ENSG00000169682|Q9H2V7-4|SPNS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.7518005371094	2	466.751059	931.487565	-0.11789	-5.5026E-05	-0.42172	-0.00019684	-0.53961	-0.00025186	466.7504098843804	75.759	0.35222	75.805	75.57	75.922	0.045952					13	10	2	0	0	0	0.89043	1	7302	7302		35.618	3.6634	1	58101			15356	6516	10545	10554	17740	17740					0.01908033957522548
HVQGLLHE	8	Unmodified	_HVQGLLHE_					0	0	0		nc|ENSG00000169682|Q9H2V7-4|SPNS1;ENSG00000169682|ENST00000311008|SPNS1;ENST00000569969.5_2_16:28993554-28995617:+|nuORF;nc|ENSG00000169682|Q9H2V7-3|SPNS1;nc|ENSG00000169682|Q9H2V7-2|SPNS1	nc|ENSG00000169682|Q9H2V7-4|SPNS1	nc|ENSG00000169682|Q9H2V7-4|SPNS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	466.751059	931.487565	-0.26128	-0.00012195	-1.2688	-0.00059224	-1.5301	-0.00071419	466.75032365523236	75.663	0.48706	75.617	75.293	75.78	-0.045982	0.020806	-0.00054686	NaN	35.618	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55035			15357	6516	10545	10554							0.01908033957522548
HVQGLLHE	8	Unmodified	_HVQGLLHE_					0	0	0		nc|ENSG00000169682|Q9H2V7-4|SPNS1;ENSG00000169682|ENST00000311008|SPNS1;ENST00000569969.5_2_16:28993554-28995617:+|nuORF;nc|ENSG00000169682|Q9H2V7-3|SPNS1;nc|ENSG00000169682|Q9H2V7-2|SPNS1	nc|ENSG00000169682|Q9H2V7-4|SPNS1	nc|ENSG00000169682|Q9H2V7-4|SPNS1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	466.751059	931.487565	-0.51683	-0.00024123	0.12432	5.8026E-05	-0.39251	-0.0001832	466.7506973462568	75.126	0.42018	75.521	75.238	75.658	0.39507	-0.075759	0.00075366	NaN	35.618	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128230			15358	6516	10545	10554							0.01908033957522548
HVQGLLHE	8	Unmodified	_HVQGLLHE_					0	0	0		nc|ENSG00000169682|Q9H2V7-4|SPNS1;ENSG00000169682|ENST00000311008|SPNS1;ENST00000569969.5_2_16:28993554-28995617:+|nuORF;nc|ENSG00000169682|Q9H2V7-3|SPNS1;nc|ENSG00000169682|Q9H2V7-2|SPNS1	nc|ENSG00000169682|Q9H2V7-4|SPNS1	nc|ENSG00000169682|Q9H2V7-4|SPNS1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	466.751059	931.487565	-0.3596	-0.00016785	-0.51012	-0.0002381	-0.86973	-0.00040595	466.7506034982092	74.879	0.29469	75.444	75.289	75.584	0.56458	-0.1529	0.00016141	NaN	35.618	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79923			15359	6516	10545	10554							0.01908033957522548
HVQVALVLVLY	11	Unmodified	_HVQVALVLVLY_					0	0	0			REV__ENSG00000171135|ENST00000647897|JAGN1	REV__ENSG00000171135|ENST00000647897|JAGN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.8853759765625	2	627.384448	1252.75434	-0.21901	-0.00013741	-2.7862	-0.001748	-3.0052	-0.0018854	627.38251010406	118.49	0.49898	118.41	118.19	118.69	-0.07531					43	18	3	0	0	0	0.77538	1	12714	12714		16.473	0.83134	1	1699700	+		15360	21716	10546	10555	17741	17741					0.13807699396375028
HVQVSYHLPTA	11	Unmodified	_HVQVSYHLPTA_					0	0	0			REV__ENST00000504385.5_1_5:180220070-180235543:-|nuORF	REV__ENST00000504385.5_1_5:180220070-180235543:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3317260742188	2	626.327662	1250.64077	-0.062907	-3.94E-05	0.057608	3.6081E-05	-0.0052992	-3.319E-06	626.3275040017871	53.127	1.167	53.144	52.533	53.7	0.017487					73	31	3	0	0	0	0.71803	1	4651	4651		19.104	0	1	169450	+		15361	27858	10547	10556	17742	17742					0.025476042833361134
HVRAPPPP	8	Unmodified	_HVRAPPPP_					0	0	0		ENSG00000188848|ENST00000502486|BEND4;nc|ENSG00000188848|Q6ZU67-2|BEND4	ENSG00000188848|ENST00000502486|BEND4	ENSG00000188848|ENST00000502486|BEND4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.251708984375	2	435.750862	869.487171	1.444	0.00062921	3.3092	0.001442	4.7532	0.0020712	435.75235603022185	76.973	2.779	77.021	75.589	78.368	0.047981					162	108	2	0	0	0	0.4196	1	7690	7690		3.6843	0	1	380890			15362	7967	10548	10557	17743	17743					0.047206590283167316
HVRAPSPA	8	Unmodified	_HVRAPSPA_					0	0	0		ENST00000498611.5_1_22:50656616-50657925:-|nuORF	ENST00000498611.5_1_22:50656616-50657925:-|nuORF	ENST00000498611.5_1_22:50656616-50657925:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.7329406738281	2	417.732669	833.450785	-0.38661	-0.0001615	0.82104	0.00034298	0.43443	0.00018148	417.7328812532225	32.937	0.70779	32.883	32.626	33.334	-0.05434					39	17	4	0	0	0	0.9159	1	1964	1964		44.531	2.0566	1	130120			15363	12829	10549	10558	17744	17744					0.027397821316071713
HVRLLLFD	8	Unmodified	_HVRLLLFD_					0	0	0			REV__ENST00000409785.8_1_2:85273293-85273398:+|nuORF	REV__ENST00000409785.8_1_2:85273293-85273398:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8003234863281	2	506.800552	1011.58655	-0.45827	-0.00023225	1.7811	0.00090266	1.3228	0.00067041	506.80143278621483	53.641	1.4346	53.616	53.128	54.562	-0.024754					61	37	2	0	0	0	0.84341	1	4795	4795		24.203	1.1603	1	166920	+		15364	26355	10550	10559	17745	17745					0.08122056922422871
HVRRHKGVR	9	Unmodified	_HVRRHKGVR_					0	0	0		ENSG00000204859|ENST00000377674|ZBTB48;ENST00000498342.5_1_1:6648784-6649012:+|nuORF;ENST00000466941.1_1_1:6648784-6649269:+|nuORF	ENSG00000204859|ENST00000377674|ZBTB48	ENSG00000204859|ENST00000377674|ZBTB48	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	572.8491821289062	2	572.849765	1143.68498	0.027736	1.5889E-05	-0.46699	-0.00026751	-0.43925	-0.00025163	572.8493920289332	16.911	0.34712	16.988	16.858	17.205	0.07715					29	14	3	0	0	0	0.78536	1	157	157		29.15	8.2026	1	138760			15365	8493	10551	10560	17746	17746					0.11888098010854264
HVRTDENIK	9	Unmodified	_HVRTDENIK_					0	0	0			REV__nc|ENSG00000120254|Q6UB35-2|MTHFD1L	REV__nc|ENSG00000120254|Q6UB35-2|MTHFD1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	556.7982788085938	2	556.296362	1110.57817	0.28881	0.00016066	3.2908	0.0018307	3.5796	0.0019913	556.297866727419	75.765	0.65176	75.891	75.567	76.219	0.12545					28	18	2	0	0	0	0.33718	1	7056	7056		62.107	12.666	1	77283	+		15366	18402	10552	10561	17747	17747					0.027304582151373324
HVRTDENIK	9	Unmodified	_HVRTDENIK_					0	0	0			REV__nc|ENSG00000120254|Q6UB35-2|MTHFD1L	REV__nc|ENSG00000120254|Q6UB35-2|MTHFD1L	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	556.296362	1110.57817	-0.81549	-0.00045366	4.284	0.0023831	3.4685	0.0019295	556.2983752328546	76.089	0.52838	76.089	75.833	76.362	0	0.226	0.00082532	NaN	62.107	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70570	+		15367	18402	10552	10561							0.027304582151373324
HVRTDENIK	9	Unmodified	_HVRTDENIK_					0	0	0			REV__nc|ENSG00000120254|Q6UB35-2|MTHFD1L	REV__nc|ENSG00000120254|Q6UB35-2|MTHFD1L	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	556.296362	1110.57817	0.28881	0.00016066	3.2908	0.0018307	3.5796	0.0019913	556.297866727419	75.765	0.65176	75.891	75.567	76.219	0.12545	0.028198	-0.00027967	NaN	62.107	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77283	+		15368	18402	10552	10561							0.027304582151373324
HVRTDENIK	9	Unmodified	_HVRTDENIK_					0	0	0			REV__nc|ENSG00000120254|Q6UB35-2|MTHFD1L	REV__nc|ENSG00000120254|Q6UB35-2|MTHFD1L	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	556.296362	1110.57817	0.63135	0.00035122	2.8398	0.0015798	3.4711	0.001931	556.297690662714	75.619	0.69987	75.753	75.472	76.172	0.13325	-0.11007	-0.00078147	NaN	62.107	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85995	+		15369	18402	10552	10561							0.027304582151373324
HVSFTTGST	9	Unmodified	_HVSFTTGST_					0	0	0		ENSG00000275342|ENST00000615670|PRAG1	ENSG00000275342|ENST00000615670|PRAG1	ENSG00000275342|ENST00000615670|PRAG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7233581542969	2	468.724707	935.43486	-0.75515	-0.00035396	-1.6747	-0.00078499	-2.4299	-0.001139	468.7237161519137	93.418	1.0486	93.868	93.278	94.327	0.44988					49	24	3	0	0	0	0.7932	1	11177	11177		24.203	2.2429	1	570630			15370	9001	10553	10562	17748	17748					-0.035439688959286286
HVSNISYD	8	Unmodified	_HVSNISYD_					0	0	0			REV__ENST00000583108.5_1_17:65733963-65734484:+|nuORF	REV__ENST00000583108.5_1_17:65733963-65734484:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.715087890625	2	467.716882	933.41921	-1.0273	-0.00048048	-1.8687	-0.00087402	-2.896	-0.0013545	467.71588340650413	72.084	0.79173	72.215	71.826	72.618	0.13146					44	28	3	0	0	0	0.86677	1	6567	6567		27.882	1.0861	1	138750	+		15371	18919	10554	10563	17749	17749					-0.05016255413011095
HVTARPPGT	9	Unmodified	_HVTARPPGT_					0	0	0			REV__ENSG00000106780|ENST00000373930|MEGF9	REV__ENSG00000106780|ENST00000373930|MEGF9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2555236816406	2	468.256508	934.498464	0.60478	0.00028319	-4.1932	-0.0019635	-3.5884	-0.0016803	468.25441943244317	81.627	3.5592	81.77	80.781	84.34	0.14352					144	82	2	0	0	0	0.67345	1	7952	7952		42.396	11.892	1	205460	+		15372	17629	10555	10564	17750	17750					0.0285943633180068
HVTFVTENLQD	11	Unmodified	_HVTFVTENLQD_					0	0	0			REV__nc|ENSG00000110497|Q9C0C7-4|AMBRA1	REV__nc|ENSG00000110497|Q9C0C7-4|AMBRA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.30035400390625	3	434.882337	1301.62518	-1.3033	-0.0005668	1.373	0.0005971	0.069668	3.0297E-05	434.8828112672729	73.297	0.17393	73.38	73.264	73.438	0.083138					7	5	2	0	0	0	0.17368	1	6731	6731		28.577	10.744	1	79259	+		15373	17819	10556	10565	17751	17751					-0.013567270243811436
HVTGKFAVV	9	Unmodified	_HVTGKFAVV_					0	0	0			REV__ENST00000491598.5_1_7:139726040-139754542:-|nuORF	REV__ENST00000491598.5_1_7:139726040-139754542:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2788391113281	2	479.279452	956.544351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.921	1	16.839	16.339	17.339	-0.0821								0	0	0	0.32469	1	188	188		21.96	1.013	1		+		15374	27659	10557	10566	17752	17752					0.0643408151404401
HVTSCYAYT	9	Unmodified	_HVTSCYAYT_					0	0	0			REV__chr14:23970332-23982495|37|53.43|0.78|6.1|+|2|TE_info:L1PA7,L1PA7_dup11225,L1,LINE,acceptor,+,23982495,23984046|DHRS4L2,None|17	REV__chr14:23970332-23982495|37|53.43|0.78|6.1|+|2|TE_info:L1PA7,L1PA7_dup11225,L1,LINE,acceptor,+,23982495,23984046|DHRS4L2,None|17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.2273559570312	2	522.726392	1043.43823	0.45411	0.00023737	-1.2738	-0.00066584	-0.81968	-0.00042847	523.2257514095292	75.443	0.91326	75.838	75.532	76.445	0.39507					60	21	4	0	0	0	0.72402	1	8537	8537		38.806	7.2763	1	443730	+		15375	15590	10558	10567	17753	17753					-0.08175042113612108
HVTSLYLRRKI	11	Unmodified	_HVTSLYLRRKI_					0	0	0			REV__ENSG00000163689|ENST00000482387|CFAP20DC	REV__ENSG00000163689|ENST00000482387|CFAP20DC	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.94781494140625	3	462.617377	1384.8303	-1.7366	-0.00080338	0.91812	0.00042474	-0.81848	-0.00037864	462.6178127662106	113.34	1.5886	113.29	113.24	114.83	-0.044777					48	35	2	0	0	0	0.17586	1	12162	12162		11.932	0	1	510450	+		15376	20958	10559	10568	17754	17754					0.15328096296502736
HVVFIALL	8	Unmodified	_HVVFIALL_					0	0	0		ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.263916015625	2	456.289288	910.564024	0.33277	0.00015184	1.1994	0.00054729	1.5322	0.00069913	456.2887976324361	79.781	0.083786	79.835	79.796	79.879	0.053841					4	2	2	0	0	0	0.4196	1	7890	7890		5.0869	3.4679	1	29087			15377	2876	10560	10569	17755	17755					0.1051645752480681
HVVKWAKAL	9	Unmodified	_HVVKWAKAL_					0	0	0		ENSG00000169083|ENST00000374690|AR;nc|ENSG00000169083|P10275-2|AR	ENSG00000169083|ENST00000374690|AR	ENSG00000169083|ENST00000374690|AR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3237915039062	2	526.324194	1050.63383	-0.18304	-9.6338E-05	0.74345	0.0003913	0.56041	0.00029496	526.324520166758	61.08	1.3849	61.181	59.837	61.222	0.10082					92	55	2	0	0	0	0.7932	1	5147	5147		17.365	0.89182	1	275350			15378	6467	10561	10570	17756	17756					0.11054336193410563
HVVKWAKAL	9	Unmodified	_HVVKWAKAL_					0	0	0		ENSG00000169083|ENST00000374690|AR;nc|ENSG00000169083|P10275-2|AR	ENSG00000169083|ENST00000374690|AR	ENSG00000169083|ENST00000374690|AR	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.32568359375	2	526.324194	1050.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.038	1	62.054	61.554	62.554	0.015724								0	0	0	0.33301	1	5404	5404		19.36	1.995	1				15379	6467	10561	10570	17757	17757					0.11054336193410563
HVVLKLCKS	9	Unmodified	_HVVLKLCKS_					0	0	0		ENST00000519856.1_1_8:48424103-48424298:-|nuORF	ENST00000519856.1_1_8:48424103-48424298:-|nuORF	ENST00000519856.1_1_8:48424103-48424298:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8088989257812	2	513.810062	1025.60557	-0.38168	-0.00019611	-1.7037	-0.00087537	-2.0854	-0.0010715	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.7932	1	4211	4211		24.203	4.8428	1	926440			15380	13146	10562	10571	17758	17758					0.09379270221802471
HVVTTTTHK	9	Unmodified	_HVVTTTTHK_					0	0	0		nc|ENSG00000176974|P34896-4|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1;nc|ENSG00000176974|P34896-2|SHMT1;ENSG00000176974|ENST00000316694|SHMT1	nc|ENSG00000176974|P34896-4|SHMT1	nc|ENSG00000176974|P34896-4|SHMT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2816162109375	2	512.282723	1022.55089	-1.5312	-0.00078441	-1.1667	-0.00059769	-2.6979	-0.0013821	512.2820384248688	86.195	3.9563	86.353	85.285	89.241	0.15851					164	92	2	0	0	0	0.77546	1	8538	8538		31.955	5.1588	1	356130			15381	7109	10563	10572	17759	17759					0.040519746747463614
HVVYWLGG	8	Unmodified	_HVVYWLGG_					0	0	0			REV__ENST00000484270.2_1_1:32502634-32503488:+|nuORF	REV__ENST00000484270.2_1_1:32502634-32503488:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7777099609375	2	465.745245	929.475937	-0.20982	-9.7725E-05	-3.7931	-0.0017666	-4.003	-0.0018644	465.743955028688	81.892	0.23338	82.392	82.304	82.537	0.49967					8	5	2	0	0	0	0.4196	1	9476	9476		33.493	24.671	1	48057	+		15382	27508	10564	10573	17760	17760					0.008378369341926373
HVWGIFLR	8	Unmodified	_HVWGIFLR_					0	0	0		ENST00000367080.7_1_1:207226634-207228103:+|nuORF	ENST00000367080.7_1_1:207226634-207228103:+|nuORF	ENST00000367080.7_1_1:207226634-207228103:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7611083984375	2	514.295436	1026.57632	0.046934	2.4138E-05	0.72213	0.00037139	0.76906	0.00039553	514.2956903551169	84.756	0.47794	85.204	84.993	85.471	0.44736					20	11	2	0	0	0	0.4196	1	9886	9886		39.021	1.8624	1	107270			15383	10531	10565	10574	17761	17761					0.06409493987825954
HVYKCLKYHLC	11	Unmodified	_HVYKCLKYHLC_					0	0	0		ENST00000230461.10_1_6:75965301-75965511:-|nuORF	ENST00000230461.10_1_6:75965301-75965511:-|nuORF	ENST00000230461.10_1_6:75965301-75965511:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	469.57403564453125	3	469.573904	1405.69988	0.36994	0.00017371	-1.4195	-0.00066656	-1.0496	-0.00049284	469.90768139738736	17.085	0.66042	16.602	16.417	17.077	-0.48256					27	14	3	0	0	0	0.73621	1	225	225		25.126	1.7481	1	63687			15384	9213	10566	10575	17762	17762					0.013260409816439278
HVYQKIKYREK	11	Unmodified	_HVYQKIKYREK_					0	0	0		ENSG00000171815|ENST00000306549|PCDHB1	ENSG00000171815|ENST00000306549|PCDHB1	ENSG00000171815|ENST00000306549|PCDHB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.9510498046875	3	497.952537	1490.83578	-1.8811	-0.00093669	-0.9062	-0.00045125	-2.7873	-0.0013879	497.95200362159926	24.056	0.79183	24.056	23.674	24.466	0					97	33	4	0	0	0	0.76251	1	802	802		19.263	1.4295	1	192870			15385	6715	10567	10576	17763	17763					0.10999775088293973
HVYQKIKYREK	11	Unmodified	_HVYQKIKYREK_					0	0	0		ENSG00000171815|ENST00000306549|PCDHB1	ENSG00000171815|ENST00000306549|PCDHB1	ENSG00000171815|ENST00000306549|PCDHB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.2848815917969	3	497.952537	1490.83578	-0.26391	-0.00013141	-2.2518	-0.0011213	-2.5157	-0.0012527	497.9513595269569	17.389	0.40384	17.31	17.13	17.534	-0.079056					39	17	3	0	0	0	0.77511	1	216	216		16.53	2.4438	1	123420			15386	6715	10567	10576	17764	17764					0.10999775088293973
HVYVGNISK	9	Unmodified	_HVYVGNISK_					0	0	0		ENSG00000164151|ENST00000296564|ICE1	ENSG00000164151|ENST00000296564|ICE1	ENSG00000164151|ENST00000296564|ICE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.779541015625	2	508.779816	1015.54508	-0.75393	-0.00038358	0.91946	0.0004678	0.16554	8.4221E-05	508.7801609276499	29.083	0.95427	29.054	28.736	29.691	-0.029207					46	21	4	0	0	0	0.33718	3	1815	1804;1815;1829		62.107	19.243	1	372210			15387	5926	10568	10577	17765;17766;17767	17766					0.03792876163095116
HVYVGNISK	9	Unmodified	_HVYVGNISK_					0	0	0		ENSG00000164151|ENST00000296564|ICE1	ENSG00000164151|ENST00000296564|ICE1	ENSG00000164151|ENST00000296564|ICE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.779541015625	2	508.779816	1015.54508	1.3089	0.00066593	-1.3249	-0.00067408	-0.016016	-8.1487E-06	508.7789685977328	29.215	0.86274	29.042	28.76	29.623	-0.17336					28	19	2	0	0	0	0.24527	3	1852	1840;1852;1865		69.628	20.186	1	496070			15388	5926	10568	10577	17768;17769;17770	17769					0.03792876163095116
HWDHITKLR	9	Unmodified	_HWDHITKLR_					0	0	0		nc|ENSG00000244617|Q53RT3|ASPRV1;ENSG00000244617|ENST00000320256|ASPRV1	nc|ENSG00000244617|Q53RT3|ASPRV1	nc|ENSG00000244617|Q53RT3|ASPRV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.83740234375	2	603.330539	1204.64652	4.177	0.0025201	2.4654	0.0014874	6.6424	0.0040075	603.3317975621229	106.17	0.67964	106.36	106	106.68	0.18647					61	29	3	0	0	0	0.72402	1	12988	12988		38.806	8.3025	1	131890			15389	15283	10569	10578	17771	17771					0.0523874758562215
HWDHITKLR	9	Unmodified	_HWDHITKLR_					0	0	0		nc|ENSG00000244617|Q53RT3|ASPRV1;ENSG00000244617|ENST00000320256|ASPRV1	nc|ENSG00000244617|Q53RT3|ASPRV1	nc|ENSG00000244617|Q53RT3|ASPRV1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	603.330539	1204.64652	2.4623	0.0014856	3.785	0.0022836	6.2473	0.0037692	603.3327630972801	106.24	0.58361	106.37	106.07	106.65	0.12742	0.0023264	0.00089381	NaN	38.806	47	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146530			15390	15283	10569	10578							0.0523874758562215
HWDRDHRRYFY	11	Unmodified	_HWDRDHRRYFY_					0	0	0		ENSG00000109920|ENST00000263773|FNBP4;nc|ENSG00000109920|Q8N3X1-2|FNBP4;ENST00000525792.5_1_11:47746320-47755666:-|nuORF	ENSG00000109920|ENST00000263773|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.2664794921875	3	550.927274	1649.75999	0.47698	0.00026278	2.7325	0.0015054	3.2094	0.0017682	550.9287896629202	18.96	0.43299	19.033	18.835	19.268	0.073463					20	12	2	0	0	0	0.8398	1	354	354		6.6596	0.33873	1	22033			15391	2493	10570	10579	17772	17772					-0.03889809039242209
HWDRDHRRYFY	11	Unmodified	_HWDRDHRRYFY_					0	0	0		ENSG00000109920|ENST00000263773|FNBP4;nc|ENSG00000109920|Q8N3X1-2|FNBP4;ENST00000525792.5_1_11:47746320-47755666:-|nuORF	ENSG00000109920|ENST00000263773|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	550.927274	1649.75999	0.28995	0.00015974	2.6041	0.0014347	2.8941	0.0015944	550.9286435285642	19.3	0.35271	19.226	19.116	19.469	-0.073704	0.10739	0.00013774	NaN	6.6596	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23969			15392	2493	10570	10579							-0.03889809039242209
HWDRDHRRYFY	11	Unmodified	_HWDRDHRRYFY_					0	0	0		ENSG00000109920|ENST00000263773|FNBP4;nc|ENSG00000109920|Q8N3X1-2|FNBP4;ENST00000525792.5_1_11:47746320-47755666:-|nuORF	ENSG00000109920|ENST00000263773|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	550.927274	1649.75999	0.13105	7.22E-05	3.0703	0.0016915	3.2013	0.0017637	551.2630343761584	18.958	0.17836	19.025	18.98	19.158	0.066296	-0.09452	0.00090819	NaN	6.6596	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115150			15393	2493	10570	10579							-0.03889809039242209
HWDRDHRRYFY	11	Unmodified	_HWDRDHRRYFY_					0	0	0		ENSG00000109920|ENST00000263773|FNBP4;nc|ENSG00000109920|Q8N3X1-2|FNBP4;ENST00000525792.5_1_11:47746320-47755666:-|nuORF	ENSG00000109920|ENST00000263773|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	550.927274	1649.75999	0.9364	0.00051589	2.9271	0.0016126	3.8635	0.0021285	550.9287000828759	19.022	0.2154	18.999	18.852	19.067	-0.023342	-0.12031	0.00067144	NaN	6.6596	14	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42210			15394	2493	10570	10579							-0.03889809039242209
HWEAASQAPAA	11	Unmodified	_HWEAASQAPAA_					0	0	0		ENST00000547675.5_1_12:49496282-49498554:-|nuORF	ENST00000547675.5_1_12:49496282-49498554:-|nuORF	ENST00000547675.5_1_12:49496282-49498554:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.7672729492188	2	569.767437	1137.52032	0.51176	0.00029159	-2.2062	-0.001257	-1.6944	-0.00096544	569.7660224758696	60.966	0.45724	61.085	60.834	61.291	0.11901					44	20	3	0	0	0	0.67778	1	5279	5279		35.152	4.8343	1	681140			15395	13612	10571	10580	17773	17773					-0.04293803710288557
HWIEDVRKY	9	Unmodified	_HWIEDVRKY_					0	0	0		nc|ENSG00000172780|Q86YS6-2|RAB43;ENST00000561790.1_1_16:46660318-46660894:-|nuORF;ENSG00000172780|ENST00000315150|RAB43	nc|ENSG00000172780|Q86YS6-2|RAB43	nc|ENSG00000172780|Q86YS6-2|RAB43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.3225708007812	2	623.32238	1244.63021	-0.74015	-0.00046135	0.50944	0.00031755	-0.23071	-0.00014381	623.3225358169732	57.039	0.54884	57.039	56.823	57.372	0					53	23	3	0	0	0	0.62081	1	4913	4913		45.952	6.6991	1	309880			15396	6794	10572	10581	17774	17774					0.017676216288919022
HWKDKLNRFNK	11	Unmodified	_HWKDKLNRFNK_					0	0	0		ENSG00000090020|ENST00000263980|SLC9A1;ENST00000374089.5_1_1:27426800-27429818:-|nuORF	ENSG00000090020|ENST00000263980|SLC9A1	ENSG00000090020|ENST00000263980|SLC9A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.2723388671875	3	495.940632	1484.80007	-1.6186	-0.00080275	-0.11486	-5.6965E-05	-1.7335	-0.00085971	495.94042028285827	42.728	0.5214	42.728	42.57	43.091	0					27	12	3	0	0	0	0.76892	1	2999	2999		17.833	3.1395	1	96341			15397	1636	10573	10582	17775	17775					0.07705737631295051
HWLRIKRLLGL	11	Unmodified	_HWLRIKRLLGL_					0	0	0			REV__ENSG00000158683|ENST00000289672|PKD1L1	REV__ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.9709167480469	3	468.969863	1403.88776	-1.6686	-0.00078252	4.1062	0.0019257	2.4376	0.0011432	468.9716486739128	48.981	2.0478	48.981	48.288	50.336	0					141	48	4	0	0	0	0.78683	5	3807	3807;3818;3861;3873;3895		14.086	5.2867	1	552830	+		15398	20618	10574	10583	17776;17777;17778;17779;17780	17776					0.20196983292726145
HWLRIKRLLGL	11	Unmodified	_HWLRIKRLLGL_					0	0	0			REV__ENSG00000158683|ENST00000289672|PKD1L1	REV__ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.9707336425781	3	468.969863	1403.88776	0.068513	3.213E-05	2.2515	0.0010559	2.32	0.001088	468.9707934879958	48.712	1.6244	48.706	48.129	49.754	-0.0056419					103	36	4	0	0	0	0.78683	3	4023	4011;4023;4035		14.086	7.7651	1	665370	+		15399	20618	10574	10583	17781;17782;17783	17782					0.20196983292726145
HWLRIKRLLGL	11	Unmodified	_HWLRIKRLLGL_					0	0	0			REV__ENSG00000158683|ENST00000289672|PKD1L1	REV__ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.97088623046875	3	468.969863	1403.88776	-0.72769	-0.00034126	2.8912	0.0013559	2.1635	0.0010146	468.971108040395	48.851	1.8477	48.826	48.183	50.03	-0.025112					104	41	4	0	0	0	0.78391	3	4107	4107;4119;4130		14.694	9.5513	1	717440	+		15400	20618	10574	10583	17784;17785;17786	17784					0.20196983292726145
HWLRIKRLLGL	11	Unmodified	_HWLRIKRLLGL_					0	0	0			REV__ENSG00000158683|ENST00000289672|PKD1L1	REV__ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.97064208984375	3	468.969863	1403.88776	-0.67422	-0.00031619	2.9073	0.0013634	2.2331	0.0010472	468.97111035910297	48.878	1.755	48.878	48.363	50.118	0.00016785					115	39	4	0	0	0	0.76892	2	4080	4069;4080		17.833	8.6213	1	756620	+		15401	20618	10574	10583	17787;17788	17788					0.20196983292726145
HWLRIKRLLGL	11	Unmodified	_HWLRIKRLLGL_					0	0	0			REV__ENSG00000158683|ENST00000289672|PKD1L1	REV__ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.9704895019531	3	468.969863	1403.88776	-1.0505	-0.00049264	3.5261	0.0016536	2.4756	0.001161	468.97139201096996	48.715	1.6673	48.738	48.193	49.86	0.022274					129	42	5	0	0	0	0.80813	1	3744	3744		9.6461	0.43434	1	766650	+		15402	20618	10574	10583	17789	17789					0.20196983292726145
HWLRIKRLLGL	11	Unmodified	_HWLRIKRLLGL_					0	0	0			REV__ENSG00000158683|ENST00000289672|PKD1L1	REV__ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.3053283691406	3	468.969863	1403.88776	0.30555	0.00014329	2.216	0.0010392	2.5216	0.0011825	468.97072625730493	48.907	1.5884	48.945	48.371	49.959	0.037731					126	38	5	0	0	0	0.74771	4	3745	3722;3745;3757;3767		22.562	12.458	1	778810	+		15403	20618	10574	10583	17790;17791;17792;17793	17791					0.20196983292726145
HWLRIKRLLGL	11	Unmodified	_HWLRIKRLLGL_					0	0	0			REV__ENSG00000158683|ENST00000289672|PKD1L1	REV__ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.97125244140625	3	468.969863	1403.88776	-0.9844	-0.00046166	3.5081	0.0016452	2.5237	0.0011835	468.97140207512837	46.538	1.1378	47.009	46.294	47.432	0.47139					74	27	4	0	0	0	0.76251	2	4387	4377;4387		19.263	7.6268	1	1659500	+		15404	20618	10574	10583	17794;17795	17795					0.20196983292726145
HWLRIKRLLGL	11	Unmodified	_HWLRIKRLLGL_					0	0	0			REV__ENSG00000158683|ENST00000289672|PKD1L1	REV__ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.3061828613281	3	468.969863	1403.88776	-1.2833	-0.00060182	3.7585	0.0017626	2.4753	0.0011608	468.97145216508005	46.139	1.1438	47.043	46.576	47.72	0.90429					89	27	5	0	0	0	0.76579	4	4357	4357;4369;4381;4395		18.531	8.4272	1	3813400	+		15405	20618	10574	10583	17796;17797;17798;17799	17796					0.20196983292726145
HWLRIKRLLGL	11	Unmodified	_HWLRIKRLLGL_					0	0	0			REV__ENSG00000158683|ENST00000289672|PKD1L1	REV__ENSG00000158683|ENST00000289672|PKD1L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.3061828613281	3	468.969863	1403.88776	-1.2833	-0.00060182	3.7585	0.0017626	2.4753	0.0011608	468.97145216508005	46.139	1.1438	47.043	46.576	47.72	0.90429					89	27	5	0	0	0	0.181	1	4357	4357		18.531	12.21	1	3813400	+		15406	20618	10574	10583	17800	17800					0.20196983292726145
HWLRIKRLLGL	11	Unmodified	_HWLRIKRLLGL_					0	0	0			REV__ENSG00000158683|ENST00000289672|PKD1L1	REV__ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	468.969863	1403.88776	-0.67422	-0.00031619	2.9073	0.0013634	2.2331	0.0010472	468.97111035910297	48.878	1.755	48.878	48.363	50.118	0.00016785	0.044465	-0.00019729	NaN	22.562	115	39	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	756620	+		15407	20618	10574	10583							0.20196983292726145
HWMLYIHFCLL	11	Unmodified	_HWMLYIHFCLL_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.581787109375	3	492.582399	1474.72537	-1.1662	-0.00057443	-0.15829	-7.797E-05	-1.3244	-0.0006524	492.58234560824593	25.158	0.69501	25.12	24.798	25.493	-0.037176					38	18	3	0	0	0	0.75544	1	991	991		20.837	4.3073	1	111400	+		15408	20677	10575	10584	17801	17801					0.006995155040840473
HWPWGSVY	8	Unmodified	_HWPWGSVY_					0	0	0		ENST00000394671.7_1_5:140022620-140023405:+|nuORF;ENST00000509269.1_1_5:140023130-140023405:+|nuORF	ENST00000394671.7_1_5:140022620-140023405:+|nuORF	ENST00000394671.7_1_5:140022620-140023405:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.239013671875	2	516.240327	1030.4661	-0.98572	-0.00050887	-2.0632	-0.0010651	-3.0489	-0.001574	516.2391591330048	40.118	0.50422	40.074	39.837	40.341	-0.043697					16	11	2	0	0	0	0.89567	1	2926	2926		57.453	0.7316	1	79951			15409	11074	10576	10585	17802	17802					-0.047913510711850904
HWQFRKKYHHH	11	Unmodified	_HWQFRKKYHHH_					0	0	0			REV__nc|ENSG00000108375|Q68DV7-3|RNF43	REV__nc|ENSG00000108375|Q68DV7-3|RNF43	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2739868164062	3	535.276237	1602.80688	-0.61182	-0.00032749	-3.0405	-0.0016275	-3.6524	-0.001955	535.2750683571207	38.331	0.63707	38.853	38.357	38.994	0.52235					24	15	3	0	0	0	0.80813	1	3166	3166		9.6461	4.5038	1	525930	+		15410	17705	10577	10586	17803	17803					0.029590953025490307
HYARPIII	8	Unmodified	_HYARPIII_					0	0	0		nc|ENSG00000132535|P78352-2|DLG4;nc|ENSG00000132535|P78352-3|DLG4;ENSG00000132535|ENST00000399506|DLG4	nc|ENSG00000132535|P78352-2|DLG4	nc|ENSG00000132535|P78352-2|DLG4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7984313964844	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.698	1	56.669	56.169	57.169	-0.02866								0	0	0	0.30609	1	5196	5196		44.531	2.1349	1				15411	14923	10578	10587	17804	17804					0.08446074267999393
HYATSKRPLER	11	Unmodified	_HYATSKRPLER_					0	0	0		ENST00000260753.8_1_10:91469724-91470766:+|nuORF	ENST00000260753.8_1_10:91469724-91470766:+|nuORF	ENST00000260753.8_1_10:91469724-91470766:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.25	3	453.249354	1356.72623	0.7922	0.00035907	-0.73295	-0.00033221	0.059257	2.6858E-05	453.24893502220635	24.05	1.229	24.007	23.603	24.832	-0.043221					89	31	4	0	0	0	0.74771	1	825	825		22.562	3.2989	1	177000			15412	9392	10579	10588	17805	17805					0.06213769468990904
HYCEVMKLN	9	Unmodified	_HYCEVMKLN_					0	0	0			REV__ENST00000422653.1_1_9:88371036-88385349:+|nuORF	REV__ENST00000422653.1_1_9:88371036-88385349:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.7657470703125	2	568.764994	1135.51544	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.279	1	74.407	73.907	74.907	0.12711								0	0	0	0.32039	1	6859	6859		44.117	3.3386	1		+		15413	26505	10580	10589	17806	17806					-0.046901471689125174
HYLLARLP	8	Unmodified	_HYLLARLP_					0	0	0			REV__ENST00000406453.3_1_7:5331370-5336744:+|nuORF	REV__ENST00000406453.3_1_7:5331370-5336744:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958679199219	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.421	1	66.551	66.051	67.051	0.12996								0	0	0	0.30004	1	5892	5892		21.702	1.2205	1		+		15414	26304	10581	10590	17807	17807					0.08446074267999393
HYLLARLP	8	Unmodified	_HYLLARLP_					0	0	0			REV__ENST00000406453.3_1_7:5331370-5336744:+|nuORF	REV__ENST00000406453.3_1_7:5331370-5336744:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7965087890625	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.81548	1	4731	4731		20.482	2.1574	1	1898900	+		15415	26304	10581	10590	17808	17808					0.08446074267999393
HYLRRDAY	8	Unmodified	_HYLRRDAY_					0	0	0			REV__chr1:203863725-203869877|45|56.87|0.75|6.24|+|2|SNRPE,SNRPE|1	REV__chr1:203863725-203869877|45|56.87|0.75|6.24|+|2|SNRPE,SNRPE|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.2794189453125	2	547.280515	1092.54648	0.86735	0.00047468	-2.2774	-0.0012464	-1.41	-0.00077167	547.2790276989027	27.014	1.0456	26.987	26.557	27.602	-0.027706					52	25	3	0	0	0	0.91472	1	1194	1194		44.117	3.3386	1	173050	+		15416	15437	10582	10591	17809	17809					0.003905102518501735
HYQAPAIK	8	Unmodified	_HYQAPAIK_					0	0	0		ENST00000548599.5_1_12:70731222-70732229:+|nuORF	ENST00000548599.5_1_12:70731222-70732229:+|nuORF	ENST00000548599.5_1_12:70731222-70732229:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2534484863281	2	464.255977	926.497401	-1.1813	-0.00054845	-2.9805	-0.0013837	-4.1619	-0.0019322	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.87922	1	7803	7803		31.955	2.8053	1	946850			15417	13620	10583	10592	17810	17810					0.03121221962896925
HYRRGLRAGK	10	Unmodified	_HYRRGLRAGK_					0	0	0		ENST00000557314.5_1_14:20839728-20850189:-|nuORF	ENST00000557314.5_1_14:20839728-20850189:-|nuORF	ENST00000557314.5_1_14:20839728-20850189:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.2416687011719	3	405.239012	1212.69521	-0.9621	-0.00038988	4.0667	0.001648	3.1046	0.0012581	405.24065528947847	103.14	0.51096	103.14	102.87	103.38	0					23	12	2	0	0	0	0.86338	1	10585	10585		31.634	5.5709	1	2123200			15418	13769	10584	10593	17811	17811					0.0973666094539567
HYRYYVREMRI	11	Unmodified	_HYRYYVREMRI_					0	0	0		nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-2|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;ENSG00000163636|ENST00000295901|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6	nc|ENSG00000163636|Q15008-3|PSMD6	nc|ENSG00000163636|Q15008-3|PSMD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.6074829101562	3	529.273393	1584.79835	0.2965	0.00015693	-0.89111	-0.00047164	-0.59461	-0.00031471	529.272782493992	75.879	0.9494	75.833	75.455	76.404	-0.045975					62	25	3	0	0	0	0.81021	1	7527	7527		9.2118	2.5522	1	371590			15419	5845	10585	10594	17812	17812					0.02934360551012105
HYRYYVREMRI	11	Unmodified	_HYRYYVREMRI_					0	0	0		nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-2|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;ENSG00000163636|ENST00000295901|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6	nc|ENSG00000163636|Q15008-3|PSMD6	nc|ENSG00000163636|Q15008-3|PSMD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.2727661132812	3	529.273393	1584.79835	-0.10927	-5.7834E-05	-0.50521	-0.0002674	-0.61448	-0.00032523	529.2730843590858	75.665	0.99193	75.79	75.363	76.355	0.12545					91	27	5	0	0	0	0.80813	1	7069	7069		9.6461	3.3253	1	900370			15420	5845	10585	10594	17813	17813					0.02934360551012105
HYRYYVREMRI	11	Unmodified	_HYRYYVREMRI_					0	0	0		nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-2|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;ENSG00000163636|ENST00000295901|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6	nc|ENSG00000163636|Q15008-3|PSMD6	nc|ENSG00000163636|Q15008-3|PSMD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.27294921875	3	529.273393	1584.79835	0.60484	0.00032013	-1.2276	-0.00064971	-0.62272	-0.00032959	529.2726734817443	75.667	0.94073	75.8	75.355	76.295	0.13325					87	26	5	0	0	0	0.81407	1	7038	7038		8.4073	2.0864	1	827280			15421	5845	10585	10594	17814	17814					0.02934360551012105
HYSGQRMCCDA	11	Unmodified	_HYSGQRMCCDA_					0	0	0			REV__ENSG00000187535|ENST00000426508|IFT140	REV__ENSG00000187535|ENST00000426508|IFT140	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	635.7450561523438	2	635.741725	1269.4689	0.52062	0.00033098	4.2398	0.0026954	4.7604	0.0030264	635.7443382974756	26.064	0.83999	26.109	25.795	26.635	0.045509					56	24	3	0	0	0	0.75544	1	1075	1075		20.837	0.84038	1	137630	+		15422	22921	10586	10595	17815	17815					-0.15505955062508292
HYTERKWI	8	Unmodified	_HYTERKWI_					0	0	0		ENST00000261340.11_1_12:9845703-9847467:+|nuORF;nc|ENSG00000069493|Q9UHP7-6|CLEC2D;ENSG00000069493|ENST00000290855|CLEC2D	ENST00000261340.11_1_12:9845703-9847467:+|nuORF	ENST00000261340.11_1_12:9845703-9847467:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	566.798095703125	2	566.79854	1131.58253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.037	1	16.958	16.458	17.458	-0.079056								0	0	0	0.29245	1	179	179		30.504	1.3336	1				15423	1221	10587	10596	17816	17816					0.021999674287144444
HYVEAEKLRGR	11	Unmodified	_HYVEAEKLRGR_					0	0	0		ENSG00000126778|ENST00000645694|SIX1	ENSG00000126778|ENST00000645694|SIX1	ENSG00000126778|ENST00000645694|SIX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.24957275390625	3	453.249354	1356.72623	0.66324	0.00030061	-0.60779	-0.00027548	0.05545	2.5133E-05	453.24905718399623	23.771	1.0969	23.827	23.444	24.541	0.055487					76	30	3	0	0	0	0.56641	1	813	813		47.228	9.6278	1	185360			15424	3469	10588	10597	17817	17817					0.06213769468945429
HYVEAEKLRGR	11	Unmodified	_HYVEAEKLRGR_					0	0	0		ENSG00000126778|ENST00000645694|SIX1	ENSG00000126778|ENST00000645694|SIX1	ENSG00000126778|ENST00000645694|SIX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.2489929199219	3	453.249354	1356.72623	-0.33158	-0.00015029	0.30091	0.00013639	-0.030672	-1.3902E-05	453.24944205426203	24.005	1.7673	23.959	23.523	25.29	-0.04598					97	41	4	0	0	0	0.6396	1	911	911		39.873	10.322	1	180870			15425	3469	10588	10597	17818	17818					0.06213769468945429
HYVEAEKLRGR	11	Unmodified	_HYVEAEKLRGR_					0	0	0		ENSG00000126778|ENST00000645694|SIX1	ENSG00000126778|ENST00000645694|SIX1	ENSG00000126778|ENST00000645694|SIX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.2489318847656	3	453.249354	1356.72623	0.7922	0.00035907	-0.73295	-0.00033221	0.059257	2.6858E-05	453.24893502220635	24.05	1.229	24.007	23.603	24.832	-0.043221					89	31	4	0	0	0	0.61824	2	848	817;848		42.338	13.761	1	177000			15426	3469	10588	10597	17819;17820	17820					0.06213769468945429
HYYQCLGPP	9	Unmodified	_HYYQCLGPP_					0	0	0			REV__ENST00000368874.8_2_1:151264931-151265267:-|nuORF	REV__ENST00000368874.8_2_1:151264931-151265267:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.2423706054688	2	539.244752	1076.47495	-0.49303	-0.00026586	-4.1471	-0.0022363	-4.6401	-0.0025021	539.2423567514398	61.882	0.81338	61.912	61.473	62.287	0.029579					71	34	3	0	0	0	0.64338	1	5764	5764		44.531	3.1045	1	661710	+		15427	25607	10589	10598	17821	17821					-0.06022745497011783
IAAAHTFLLKH	11	Unmodified	_IAAAHTFLLKH_					0	0	0		ENSG00000170275|ENST00000320954|CRTAP	ENSG00000170275|ENST00000320954|CRTAP	ENSG00000170275|ENST00000320954|CRTAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3499755859375	2	611.358765	1220.70298	0.21646	0.00013233	-4.1006	-0.0025069	-3.8841	-0.0023746	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.69995	1	10333	10333		31.53	7.0106	1	12399000			15428	6573	10590	10599	17822	17822					0.10145375422303005
IAAAILKI	8	Unmodified	_IAAAILKI_					0	0	0		ENSG00000170790|ENST00000641461|OR10A2;ENSG00000166363|ENST00000299454|OR10A5	ENSG00000170790|ENST00000641461|OR10A2	ENSG00000170790|ENST00000641461|OR10A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7851867675781	2	406.783839	811.553125	-0.45573	-0.00018539	4.0823	0.0016606	3.6266	0.0014752	406.7853476026277	33.431	0.94502	33.374	32.967	33.912	-0.056385					79	22	4	0	0	0	0.82464	1	2066	2066		21.702	0	1	606440			15429	6185	10591	10600	17823	17823					0.13981055150509292
IAAAILKI	8	Unmodified	_IAAAILKI_					0	0	0		ENSG00000170790|ENST00000641461|OR10A2;ENSG00000166363|ENST00000299454|OR10A5	ENSG00000170790|ENST00000641461|OR10A2	ENSG00000170790|ENST00000641461|OR10A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78515625	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.83466	1	1228	1228		23.037	0	1	1410200			15430	6185	10591	10600	17824	17824					0.13981055150509292
IAAAKAKR	8	Unmodified	_IAAAKAKR_					0	0	0			REV__ENSG00000198301|ENST00000356260|SDAD1	REV__ENSG00000198301|ENST00000356260|SDAD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	414.7616882324219	2	414.774337	827.534121	0.62182	0.00025791	-0.6712	-0.0002784	-0.049382	-2.0482E-05	414.7733184341767	88.423	0.52392	88.573	88.158	88.682	0.15055					16	12	2	0	0	0	0.4196	1	8779	8779		19.36	0	1	100950	+		15431	23315	10592	10601	17825	17825					0.11345518579457803
IAAIKEVSMA	10	Unmodified	_IAAIKEVSMA_					0	0	0			REV__ENSG00000134371|ENST00000367435|CDC73	REV__ENSG00000134371|ENST00000367435|CDC73	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.79296875	2	516.791535	1031.56852	0.82179	0.0004247	2.9641	0.0015318	3.7859	0.0019565	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.82886	1	8967	8967		37.812	4.9991	1	858640	+		15432	19137	10593	10602	17826	17826					0.05399553885399655
IAAKQVIM	8	Unmodified	_IAAKQVIM_					0	0	0			REV__ENST00000357590.9_2_11:118900045-118901265:-|nuORF	REV__ENST00000357590.9_2_11:118900045-118901265:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2649841308594	2	437.264956	872.515359	-0.36505	-0.00015962	2.0195	0.00088307	1.6545	0.00072345	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.81548	1	1061	1061		20.482	1.1219	1	1300600	+		15433	25118	10594	10603	17827	17827					0.07400220893396181
IAAKRVQIKLR	11	Unmodified	_IAAKRVQIKLR_					0	0	0			REV__ENSG00000158869|ENST00000289902|FCER1G	REV__ENSG00000158869|ENST00000289902|FCER1G	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.2557678222656	3	432.625984	1294.85612	-1.8324	-0.00079275	-2.3688	-0.0010248	-4.2012	-0.0018176	432.96069018637485	107.25	0.15605	107.29	107.21	107.37	0.036125					5	3	2	0	0	0	0.18066	1	11438	11438		9.6461	0	1	28169	+		15434	20628	10595	10604	17828	17828					0.2204899053876943
IAANEETK	8	Unmodified	_IAANEETK_					0	0	0		ENST00000529239.1_1_8:61851204-61851630:-|nuORF	ENST00000529239.1_1_8:61851204-61851630:-|nuORF	ENST00000529239.1_1_8:61851204-61851630:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2647399902344	2	438.227082	874.439611	-0.55272	-0.00024222	0.9359	0.00041014	0.38318	0.00016792	438.22736552456377	26.981	0.44769	26.805	26.568	27.016	-0.17559					15	9	2	0	0	0	0.4196	1	1524	1524		14.865	8.5522	1	75180			15435	13319	10596	10605	17829	17829					-0.0026308475320320213
IAAPKAKVGPP	11	Unmodified	_IAAPKAKVGPP_					0	0	0		nc|ENSG00000129422|Q9ULD2-5|MTUS1;ENST00000523718.5_1_8:17581004-17613316:-|nuORF;nc|ENSG00000129422|Q9ULD2-2|MTUS1;ENSG00000129422|ENST00000693296|MTUS1	nc|ENSG00000129422|Q9ULD2-5|MTUS1	nc|ENSG00000129422|Q9ULD2-5|MTUS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8267211914062	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.60058	1	10401	10401		44.377	12.422	1	15330000			15436	3587	10597	10606	17830	17830					0.12214899127980061
IAAPPRPLCLL	11	Unmodified	_IAAPPRPLCLL_					0	0	0		ENST00000337959.8_1_22:43267082-43267280:-|nuORF	ENST00000337959.8_1_22:43267082-43267280:-|nuORF	ENST00000337959.8_1_22:43267082-43267280:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3543090820312	2	582.352094	1162.68964	3.1803	0.0018521	-0.95025	-0.00055338	2.2301	0.0012987	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.72918	1	11700	11700		26.693	1.1189	1	77008000			15437	10194	10598	10607	17831	17831					0.11479801318728278
IAAQLSQEARK	11	Unmodified	_IAAQLSQEARK_					0	0	0			REV__ENSG00000159307|ENST00000360835|SCUBE1	REV__ENSG00000159307|ENST00000360835|SCUBE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5650329589844	3	405.566571	1213.67788	-1.5858	-0.00064316	-3.0129	-0.0012219	-4.5987	-0.0018651	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.74771	1	5234	5234		22.562	3.2989	1	181560	+		15438	20651	10599	10608	17832	17832					0.07959275829057333
IAARLDKREK	10	Unmodified	_IAARLDKREK_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.58099365234375	3	400.578811	1198.7146	3.1805	0.001274	0.74448	0.00029822	3.925	0.0015723	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.86409	1	12362	12362		25.126	1.6033	1	4827300	+		15439	23139	10600	10609	17833	17833					0.12319572445653648
IAARLVVM	8	Unmodified	_IAARLVVM_					0	0	0			REV__ENSG00000182070|ENST00000380367|OR52A1	REV__ENSG00000182070|ENST00000380367|OR52A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.77435302734375	2	436.772948	871.531344	1.76	0.0007687	-0.85544	-0.00037363	0.90452	0.00039507	436.7727883819092	27.072	0.66235	27.045	26.605	27.267	-0.027706					26	16	2	0	0	0	0.80963	1	1202	1202		15.636	0.97212	1	43317	+		15440	22497	10601	10610	17834	17834					0.09043927130301199
IAASCAPLKA	10	Unmodified	_IAASCAPLKA_					0	0	0			REV__ENST00000360415.7_1_7:65579735-65592717:+|nuORF	REV__ENST00000360415.7_1_7:65579735-65592717:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7673034667969	2	472.76532	943.516088	0.74188	0.00035074	3.3813	0.0015986	4.1232	0.0019493	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.86218	1	8503	8503		32.812	7.2384	1	547170	+		15441	25479	10602	10611	17835	17835					0.04207015542431236
IAAVLAPDI	9	Unmodified	_IAAVLAPDI_					0	0	0			REV__ENST00000548980.1_1_12:54925998-54930034:+|nuORF	REV__ENST00000548980.1_1_12:54925998-54930034:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7677307128906	2	441.768386	881.522219	2.7351	0.0012083	-2.9605	-0.0013079	-0.22539	-9.957E-05	441.76685786355085	107.36	1.6234	107.32	106.14	107.77	-0.034134					55	37	2	0	0	0	0.72402	1	11884	11884		38.806	1.647	1	1711100	+		15442	18536	10603	10612	17836	17836					0.07671857045602337
IACKCPKI	8	Unmodified	_IACKCPKI_					0	0	0		ENSG00000065320|ENST00000173229|NTN1	ENSG00000065320|ENST00000173229|NTN1	ENSG00000065320|ENST00000173229|NTN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.24725341796875	2	438.245709	874.476865	0.45343	0.00019871	-0.4264	-0.00018687	0.027029	1.1845E-05	438.24449787819464	34.838	0.39644	34.844	34.695	35.091	0.0063896					22	10	3	0	0	0	0.91005	1	2163	2163		42.474	0.078325	1	42571			15443	1125	10604	10613	17837	17837					0.03460591987220596
IADALPVL	8	Unmodified	_IADALPVL_					0	0	0		ENSG00000081277|ENST00000367324|PKP1;nc|ENSG00000081277|Q13835|PKP1	ENSG00000081277|ENST00000367324|PKP1	ENSG00000081277|ENST00000367324|PKP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2485656738281	2	406.249829	810.485105	-0.18684	-7.5904E-05	-2.4579	-0.00099852	-2.6447	-0.0010744	406.24872241647245	90.972	2.1991	91.041	90.513	92.712	0.069328					111	52	3	0	0	0	0.82464	1	9347	9347		21.702	0	1	1239900			15444	1463	10605	10614	17838	17838					0.07228185499832307
IADQINAIR	9	Unmodified	_IADQINAIR_					0	0	0			REV__ENSG00000187554|ENST00000642603|TLR5	REV__ENSG00000187554|ENST00000642603|TLR5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.2912292480469	2	507.290548	1012.56654	-1.7442	-0.0008848	1.5396	0.00078104	-0.20454	-0.00010376	507.29114569123766	30.055	0.55795	30.055	29.764	30.322	0					28	16	2	0	0	0	0.75725	1	1352	1352		36.447	2.2742	1	125300	+		15445	22924	10606	10615	17839	17839					0.06076261191810772
IAEKDSGFGKM	11	Oxidation (M)	_IAEKDSGFGKM(Oxidation (M))_		IAEKDSGFGKM(1)		IAEKDSGFGKM(47)	0	0	1			REV__ENST00000520378.1_1_5:150518646-150537284:-|nuORF	REV__ENST00000520378.1_1_5:150518646-150537284:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.197265625	3	400.197268	1197.56997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.558	1	82.617	82.117	83.117	0.059166								0	0	0	0.56276	1	8266	8266		47.228	10.91	1		+		15446	23188	10607	10616	17840	17840		354			-0.020908568164941244
IAELEPMTK	9	Unmodified	_IAELEPMTK_					0	0	0		ENSG00000101842|ENST00000217957|VSIG1;nc|ENSG00000101842|Q86XK7-2|VSIG1	ENSG00000101842|ENST00000217957|VSIG1	ENSG00000101842|ENST00000217957|VSIG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2332763671875	2	516.275718	1030.53688	-0.024054	-1.2418E-05	-0.64299	-0.00033196	-0.66704	-0.00034438	516.2753586773721	56.535	0.65442	56.931	56.632	57.286	0.39672					31	14	3	0	0	0	0.20789	1	5810	5810		34.173	0	1	534560			15447	1963	10608	10617	17841	17841					0.022835611314576454
IAELEPMTK	9	Unmodified	_IAELEPMTK_					0	0	0		ENSG00000101842|ENST00000217957|VSIG1;nc|ENSG00000101842|Q86XK7-2|VSIG1	ENSG00000101842|ENST00000217957|VSIG1	ENSG00000101842|ENST00000217957|VSIG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.309326171875	2	516.275718	1030.53688	0.51915	0.00026802	0.074868	3.8653E-05	0.59401	0.00030667	516.2757686849593	57.58	0.64033	58.135	58.041	58.681	0.55513					18	15	2	0	0	0	0.20789	1	6004	6004		26.693	0	1	428730			15448	1963	10608	10617	17842	17842					0.022835611314576454
IAESLLGLL	9	Unmodified	_IAESLLGLL_					0	0	0		ENSG00000177542|ENST00000628067|SLC25A22	ENSG00000177542|ENST00000628067|SLC25A22	ENSG00000177542|ENST00000628067|SLC25A22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7905578613281	2	464.789318	927.564084	-1.14	-0.00052988	4.1432	0.0019257	3.0031	0.0013958	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.7932	1	1750	1750		26.796	2.5934	1	286820			15449	7146	10609	10618	17843	17843					0.09740412734140591
IAGAILVAAI	10	Unmodified	_IAGAILVAAI_					0	0	0		ENSG00000114948|ENST00000264377|ADAM23	ENSG00000114948|ENST00000264377|ADAM23	ENSG00000114948|ENST00000264377|ADAM23	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.783935546875	2	456.299853	910.585153	-2.0687	-0.00094395	2.9301	0.001337	0.86138	0.00039305	456.3009540612224	42.816	0.89454	43.249	42.525	43.419	0.4334					34	21	2	0	0	0	0.37624	1	3735	3735		12.959	0	1	296450			15450	2801	10610	10619	17844	17844					0.1262842283365444
IAGIIILVLV	10	Unmodified	_IAGIIILVLV_					0	0	0		ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	ENSG00000145794|ENST00000503335|MEGF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.3609008789062	2	512.362453	1022.71035	-0.052808	-2.7057E-05	-2.2805	-0.0011684	-2.3333	-0.0011955	512.3611914628581	74.266	1.3455	74.309	74.086	75.431	0.0429					113	47	3	0	0	0	0.85108	1	7141	7141		19.36	1.0356	1	281850			15451	4793	10611	10620	17845	17845					0.19990714970026602
IAGNVISKLGS	11	Unmodified	_IAGNVISKLGS_					0	0	0		ENST00000357166.10_1_X:128975958-128977712:-|nuORF	ENST00000357166.10_1_X:128975958-128977712:-|nuORF	ENST00000357166.10_1_X:128975958-128977712:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.8140869140625	2	529.813856	1057.61316	0.25842	0.00013691	-0.40693	-0.0002156	-0.14852	-7.8686E-05	529.813469368245	28.135	0.81001	28.095	27.793	28.603	-0.039907					37	18	3	0	0	0	0.68532	1	1394	1394		33.922	3.6039	1	193350			15452	10384	10612	10621	17846	17846					0.0866570102307378
IAGRKLVI	8	Unmodified	_IAGRKLVI_					0	0	0			REV__ENSG00000006071|ENST00000389817|ABCC8	REV__ENSG00000006071|ENST00000389817|ABCC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3000183105469	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.82419	1	6911	6911		13.775	0.81615	1	1680500	+		15453	16095	10613	10622	17847	17847					0.14627262273359065
IAGRKLVI	8	Unmodified	_IAGRKLVI_					0	0	0			REV__ENSG00000006071|ENST00000389817|ABCC8	REV__ENSG00000006071|ENST00000389817|ABCC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30023193359375	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.82419	1	6965	6965		13.775	4.3048	1	1921500	+		15454	16095	10613	10622	17848	17848					0.14627262273359065
IAGSLDTSSSI	11	Unmodified	_IAGSLDTSSSI_					0	0	0		ENST00000466860.5_1_1:12082310-12089454:+|nuORF;nc|ENSG00000116691|Q5JXC2-2|MIIP;ENSG00000116691|ENST00000235332|MIIP	ENST00000466860.5_1_1:12082310-12089454:+|nuORF	ENST00000466860.5_1_1:12082310-12089454:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2974853515625	2	525.769311	1049.52407	0.64588	0.00033958	-3.6745	-0.001932	-3.0287	-0.0015924	526.2694197725995	57.628	0.26799	58.183	58.041	58.309	0.55513					9	6	2	0	0	0	0.16388	1	6000	6000		45.972	4.5456	1	202100			15455	2935	10614	10623	17849	17849					0.001288212729150473
IAICCCCCC	9	Unmodified	_IAICCCCCC_					0	0	0		ENSG00000183255|ENST00000330938|PTTG1IP	ENSG00000183255|ENST00000330938|PTTG1IP	ENSG00000183255|ENST00000330938|PTTG1IP	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.6405944824219	2	467.642733	933.270913	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.09	1	118.02	117.52	118.52	-0.07531								0	0	0	0.32542	1	12676	12676		21.702	1.7056	1				15456	7513	10615	10624	17850	17850					-0.19839131841888502
IAICRVARLH	10	Carbamidomethyl (C)	_IAIC(Carbamidomethyl (C))RVARLH_	IAIC(1)RVARLH		IAIC(44)RVARLH		0	1	0			REV__ENST00000360265.8_1_4:7763474-7763684:-|nuORF	REV__ENST00000360265.8_1_4:7763474-7763684:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5746765136719	3	403.573003	1207.69718	0.57405	0.00023167	3.7127	0.0014983	4.2867	0.00173	403.57443061209773	82.843	3.1803	82.99	82.289	85.469	0.14694					168	73	3	0	0	0	0.70553	1	8046	8046		44.377	6.869	1	1495300	+		15457	25473	10616	10625	17851	17851	311				0.10163953638993917
IAICRVARLH	10	Carbamidomethyl (C)	_IAIC(Carbamidomethyl (C))RVARLH_	IAIC(1)RVARLH		IAIC(60)RVARLH		0	1	0			REV__ENST00000360265.8_1_4:7763474-7763684:-|nuORF	REV__ENST00000360265.8_1_4:7763474-7763684:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.57476806640625	3	403.573003	1207.69718	0.97829	0.00039481	3.4161	0.0013787	4.3944	0.0017735	403.5743581781147	80.189	0.84587	80.605	80.082	80.928	0.41621					61	19	4	0	0	0	0.44803	2	9200	9200;9224		60.118	22.61	1	3876600	+		15458	25473	10616	10625	17852;17853	17852	311				0.10163953638993917
IAICRVARLH	10	Carbamidomethyl (C)	_IAIC(Carbamidomethyl (C))RVARLH_	IAIC(1)RVARLH		IAIC(44)RVARLH		0	1	0			REV__ENST00000360265.8_1_4:7763474-7763684:-|nuORF	REV__ENST00000360265.8_1_4:7763474-7763684:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5743713378906	3	403.573003	1207.69718	-0.098768	-3.986E-05	3.965	0.0016002	3.8663	0.0015603	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.70553	1	9478	9478		44.377	8.0595	1	16485000	+		15459	25473	10616	10625	17854	17854	311				0.10163953638993917
IAIDVIDAY	9	Unmodified	_IAIDVIDAY_					0	0	0		nc|ENSG00000130638|Q9UBB4-2|ATXN10;ENSG00000130638|ENST00000252934|ATXN10	nc|ENSG00000130638|Q9UBB4-2|ATXN10	nc|ENSG00000130638|Q9UBB4-2|ATXN10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.76837158203125	2	496.768583	991.522613	-0.85663	-0.00042555	0.7533	0.00037422	-0.10333	-5.1331E-05	496.7687963716168	82.446	0.74309	82.873	82.587	83.33	0.42645					38	17	3	0	0	0	0.15928	2	9532	9532;9543		82.305	21.333	1	579950			15460	3663	10617	10626	17855;17856	17855					0.02651231974800794
IAIDVIDAY	9	Unmodified	_IAIDVIDAY_					0	0	0		nc|ENSG00000130638|Q9UBB4-2|ATXN10;ENSG00000130638|ENST00000252934|ATXN10	nc|ENSG00000130638|Q9UBB4-2|ATXN10	nc|ENSG00000130638|Q9UBB4-2|ATXN10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.768798828125	2	496.768583	991.522613	-0.14453	-7.1798E-05	0.26588	0.00013208	0.12135	6.0284E-05	496.768523112655	82.415	0.98421	82.889	82.432	83.416	0.47383					48	23	3	0	0	0	0.19953	1	9569	9569		73.975	18.471	1	720900			15461	3663	10617	10626	17857	17857					0.02651231974800794
IAIGCFPL	8	Unmodified	_IAIGCFPL_					0	0	0			REV__ENST00000497003.5_1_2:178552959-178791632:-|nuORF	REV__ENST00000497003.5_1_2:178552959-178791632:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.7339782714844	2	417.233125	832.451696	0.11985	5.0006E-05	-2.0451	-0.0008533	-1.9253	-0.00080329	417.23328861254936	32.607	0.53484	32.717	32.499	33.034	0.10991					51	25	3	0	0	0	0.88393	1	1554	1554		33.493	4.3434	1	151210	+		15462	18787	10618	10627	17858	17858					0.0287686045630835
IAIGIEEQLLD	11	Unmodified	_IAIGIEEQLLD_					0	0	0			REV__nc|ENSG00000169180|Q96QU8-2|XPO6	REV__nc|ENSG00000169180|Q96QU8-2|XPO6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.22528076171875	3	405.227333	1212.66017	0.24596	9.9668E-05	-0.99617	-0.00040368	-0.75022	-0.00030401	405.2270170895955	26.888	0.52347	26.916	26.718	27.241	0.02817					52	25	3	0	0	0	0.76251	1	1047	1047		19.263	0	1	70582	+		15463	21557	10619	10628	17859	17859					0.06234515783557981
IAILFFIC	8	Unmodified	_IAILFFIC_					0	0	0		ENST00000372067.7_1_6:43753877-43754102:+|nuORF	ENST00000372067.7_1_6:43753877-43754102:+|nuORF	ENST00000372067.7_1_6:43753877-43754102:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	471.2430114746094	2	470.27225	938.529947	-1.1164	-0.00052502	2.081	0.00097864	0.96459	0.00045362	470.2733714504588	86.567	1.0374	86.567	86.038	87.076	0					42	23	2	0	0	0	0.4196	1	8189	8189		24.504	0	1	61502			15464	10686	10620	10629	17860	17860					0.058222930415240626
IAILIGSPV	9	Unmodified	_IAILIGSPV_					0	0	0			REV__nc|ENSG00000186090|Q70Z44|HTR3D	REV__nc|ENSG00000186090|Q70Z44|HTR3D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7877502441406	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.44444	4	2850	2826;2850;2886;2954		54.765	9.4519	1	11085000	+		15465	30105	10621	10630	17861;17862;17863;17864	17862					0.11308733942325944
IAILIGSPV	9	Unmodified	_IAILIGSPV_					0	0	0			REV__nc|ENSG00000186090|Q70Z44|HTR3D	REV__nc|ENSG00000186090|Q70Z44|HTR3D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7879943847656	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.7932	1	3476	3476		26.796	1.3459	1	325400	+		15466	30105	10621	10630	17865	17865					0.11308733942325944
IAILIGSPV	9	Unmodified	_IAILIGSPV_					0	0	0			REV__nc|ENSG00000186090|Q70Z44|HTR3D	REV__nc|ENSG00000186090|Q70Z44|HTR3D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879333496094	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.67235	2	3577	3577;3590		42.474	7.2737	1	493390	+		15467	30105	10621	10630	17866;17867	17866					0.11308733942325944
IAILIGSPV	9	Unmodified	_IAILIGSPV_					0	0	0			REV__nc|ENSG00000186090|Q70Z44|HTR3D	REV__nc|ENSG00000186090|Q70Z44|HTR3D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7879943847656	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.64338	1	2715	2715		44.531	0	1	10128000	+		15468	30105	10621	10630	17868	17868					0.11308733942325944
IAILIGSPV	9	Unmodified	_IAILIGSPV_					0	0	0			REV__nc|ENSG00000186090|Q70Z44|HTR3D	REV__nc|ENSG00000186090|Q70Z44|HTR3D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7879943847656	2	441.786579	881.558604	-1.4973	-0.00066148	4.3629	0.0019275	2.8656	0.001266	441.788391738542	44.7	2.6432	44.712	43.395	46.038	0.012058					134	65	3	0	0	0	0.76402	2	3262	3229;3262		35.201	3.2459	1	555340	+		15469	30105	10621	10630	17869;17870	17870					0.11308733942325944
IAILIGSPV	9	Unmodified	_IAILIGSPV_					0	0	0			REV__nc|ENSG00000186090|Q70Z44|HTR3D	REV__nc|ENSG00000186090|Q70Z44|HTR3D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7880859375	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.7932	1	3214	3214		25.45	1.2474	1	448230	+		15470	30105	10621	10630	17871	17871					0.11308733942325944
IAILIGSPV	9	Unmodified	_IAILIGSPV_					0	0	0			REV__nc|ENSG00000186090|Q70Z44|HTR3D	REV__nc|ENSG00000186090|Q70Z44|HTR3D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7865295410156	2	441.786579	881.558604	-2.6056	-0.0011511	3.8386	0.0016959	1.233	0.00054472	441.7881605091801	40.922	2.2099	41.314	40.796	43.006	0.39209					179	59	5	0	0	0	0.64338	2	3547	3547;3559		44.531	3.9584	1	185320000	+		15471	30105	10621	10630	17872;17873	17872					0.11308733942325944
IAILIGSPV	9	Unmodified	_IAILIGSPV_					0	0	0			REV__nc|ENSG00000186090|Q70Z44|HTR3D	REV__nc|ENSG00000186090|Q70Z44|HTR3D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.78692626953125	2	441.786579	881.558604	-1.3207	-0.00058348	2.7134	0.0011988	1.3927	0.00061528	441.78767453164585	40.807	2.1151	41.396	40.908	43.023	0.58915					198	57	5	0	0	0	0.67235	3	3542	3542;3554;3578		42.474	8.9589	1	200250000	+		15472	30105	10621	10630	17874;17875;17876	17874					0.11308733942325944
IAILPVVAS	9	Unmodified	_IAILPVVAS_					0	0	0		nc|ENSG00000157827|Q96PY5|FMNL2;ENSG00000157827|ENST00000288670|FMNL2	nc|ENSG00000157827|Q96PY5|FMNL2	nc|ENSG00000157827|Q96PY5|FMNL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78778076171875	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.76402	2	3135	3135;3205		35.201	8.4046	1	448230			15473	15024	10622	10631	17877;17878	17877					0.11308733942325944
IAIMITELAN	10	Unmodified	_IAIMITELAN_					0	0	0			REV__ENSG00000124089|ENST00000243911|MC3R	REV__ENSG00000124089|ENST00000243911|MC3R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.8071899414062	2	544.804642	1087.59473	0.41149	0.00022418	3.1468	0.0017144	3.5583	0.0019386	544.8063017118704	24.787	0.48479	24.838	24.602	25.087	0.050451					23	13	2	0	0	0	0.86218	1	932	932		32.812	0.061884	1	61132	+		15474	18555	10623	10632	17879	17879					0.05443823056862129
IAIRKLRPVPI	11	Unmodified	_IAIRKLRPVPI_					0	0	0			REV__nc|ENSG00000155592|Q63HK3-2|ZKSCAN2	REV__nc|ENSG00000155592|Q63HK3-2|ZKSCAN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.24700927734375	3	425.958963	1274.85506	-1.7428	-0.00074236	2.2562	0.00096105	0.51342	0.0002187	425.95973133913145	84.646	1.0855	84.796	84.147	85.232	0.14952					57	24	3	0	0	0	0.18191	1	8200	8200		6.3209	0.31984	1	103770	+		15475	20434	10624	10633	17880	17880					0.22862776169881727
IAIRKLRPVPI	11	Unmodified	_IAIRKLRPVPI_					0	0	0			REV__nc|ENSG00000155592|Q63HK3-2|ZKSCAN2	REV__nc|ENSG00000155592|Q63HK3-2|ZKSCAN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	425.958963	1274.85506	-1.7139	-0.00073007	2.066	0.00088002	0.35202	0.00014995	425.9596955536483	84.507	1.5446	84.682	83.851	85.395	0.17561	-0.045005	0.0014084	NaN	6.3209	57	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138120	+		15476	20434	10624	10633							0.22862776169881727
IAIRKLRPVPI	11	Unmodified	_IAIRKLRPVPI_					0	0	0			REV__nc|ENSG00000155592|Q63HK3-2|ZKSCAN2	REV__nc|ENSG00000155592|Q63HK3-2|ZKSCAN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	425.958963	1274.85506	0.58874	0.00025078	-0.14981	-6.3812E-05	0.43893	0.00018697	425.95874162319376	84.771	1.4246	84.919	84.046	85.47	0.14794	0.19129	-0.0014231	NaN	6.3209	54	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113850	+		15477	20434	10624	10633							0.22862776169881727
IAIRKLRPVPI	11	Unmodified	_IAIRKLRPVPI_					0	0	0			REV__nc|ENSG00000155592|Q63HK3-2|ZKSCAN2	REV__nc|ENSG00000155592|Q63HK3-2|ZKSCAN2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	425.958963	1274.85506	-0.2133	-9.0858E-05	1.1489	0.00048938	0.93559	0.00039852	425.9591891830681	84.151	1.4336	84.586	83.791	85.225	0.43538	-0.14135	0.00023644	NaN	6.3209	87	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	653850	+		15478	20434	10624	10633							0.22862776169881727
IAISRTPVL	9	Unmodified	_IAISRTPVL_					0	0	0		ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.30560302734375	2	485.30821	968.601866	0.22249	0.00010798	-0.53362	-0.00025897	-0.31113	-0.00015099	485.3077766764581	53.34	1.7499	53.754	53.332	55.082	0.4139					89	41	4	0	0	0	2.7574E-05	6	5363	5363;5375;5386;5398;5410;5430		153.04	33.189	1	3711300			15479	6109	10625	10634	17881;17882;17883;17884;17885;17886	17881					0.11630923719599195
IAISRTPVL	9	Unmodified	_IAISRTPVL_					0	0	0		ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.30206298828125	2	485.30821	968.601866	-0.41916	-0.00020342	0.16293	7.907E-05	-0.25623	-0.00012435	485.30812933958964	53.146	1.1641	53.76	53.366	54.53	0.61436					70	27	4	0	0	0	0.034797	6	5349	5349;5358;5370;5382;5394;5408		115.49	33.189	1	4659500			15480	6109	10625	10634	17887;17888;17889;17890;17891;17892	17887					0.11630923719599195
IAISYLEQVSE	11	Unmodified	_IAISYLEQVSE_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.8270874023438	2	626.326993	1250.63943	-0.15906	-9.9625E-05	1.2524	0.00078442	1.0934	0.0006848	626.3277543404057	53.246	0.94266	53.242	52.744	53.687	-0.0033035					65	25	3	0	0	0	0.73277	1	4605	4605		16.717	0	1	196380	+		15481	16911	10626	10635	17893	17893					0.024139254039027946
IAIVDPLTREA	11	Unmodified	_IAIVDPLTREA_					0	0	0		ENSG00000102595|ENST00000376747|UGGT2;ENST00000491509.5_1_13:96539589-96543187:-|nuORF;ENST00000463054.1_1_13:96529939-96547453:-|nuORF	ENSG00000102595|ENST00000376747|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3411254882812	2	599.34552	1196.67649	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.297	1	38.314	37.814	38.814	0.016563								0	0	0	0.56276	1	2257	2257		24.519	2.5593	1				15482	2011	10627	10636	17894	17894					0.0860164174032434
IAIVFFRRQ	9	Unmodified	_IAIVFFRRQ_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.3455810546875	2	575.3482	1148.68185	-1.3696	-0.00078799	-3.1953	-0.0018384	-4.5649	-0.0026264	575.3462227460456	98.573	2.415	98.769	98.2	100.61	0.19585					159	55	5	0	0	0	0.76996	1	10171	10171		33.516	9.3128	1	2256700			15483	6985	10628	10637	17895	17895					0.11345410113472099
IAIVSGILP	9	Unmodified	_IAIVSGILP_					0	0	0		ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78790283203125	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.67235	4	3498	3489;3498;3510;3523		42.474	0	1	325400			15484	10533	10629	10638	17896;17897;17898;17899	17897					0.11308733942325944
IAIVSGILP	9	Unmodified	_IAIVSGILP_					0	0	0		ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7875061035156	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.7932	1	3533	3533		25.45	0	1	493390			15485	10533	10629	10638	17900	17900					0.11308733942325944
IAIVSGILP	9	Unmodified	_IAIVSGILP_					0	0	0		ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.78759765625	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.67235	1	2705	2705		42.474	5.446	1	10128000			15486	10533	10629	10638	17901	17901					0.11308733942325944
IAIVSGILP	9	Unmodified	_IAIVSGILP_					0	0	0		ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78753662109375	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.7932	1	3158	3158		24.203	0	1	448230			15487	10533	10629	10638	17902	17902					0.11308733942325944
IAIVSGILP	9	Unmodified	_IAIVSGILP_					0	0	0		ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7876892089844	2	441.786579	881.558604	-1.349	-0.00059598	3.2268	0.0014255	1.8778	0.00082957	441.78784477654847	43.404	1.5018	43.851	43.06	44.562	0.44641					104	36	3	0	0	0	0.72402	1	3856	3856		38.806	0	1	1005700			15488	10533	10629	10638	17903	17903					0.11308733942325944
IAIVSGILP	9	Unmodified	_IAIVSGILP_					0	0	0		ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	441.786579	881.558604	-1.8105	-0.00079986	4.7399	0.002094	2.9294	0.0012942	441.7885123269982	44.706	1.7044	44.706	44.111	45.815	0	-0.013098	0.0012118	NaN	42.474	117	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	522770			15489	10533	10629	10638							0.11308733942325944
IAIVSGILP	9	Unmodified	_IAIVSGILP_					0	0	0		ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	ENST00000367091.7_1_1:207077925-207078012:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	441.786579	881.558604	-1.6041	-0.00070866	3.7324	0.0016489	2.1283	0.00094025	441.7880376117398	43.155	1.6186	43.928	43.047	44.665	0.7738	0.038703	0.00024253	NaN	38.806	94	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1225600			15490	10533	10629	10638							0.11308733942325944
IAKAGIHARLN	11	Unmodified	_IAKAGIHARLN_					0	0	0		nc|ENSG00000112118|P25205-2|MCM3;ENSG00000112118|ENST00000596288|MCM3;ENST00000476448.1_1_6:52141011-52144220:-|nuORF	nc|ENSG00000112118|P25205-2|MCM3	nc|ENSG00000112118|P25205-2|MCM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3536987304688	2	582.354014	1162.69348	-1.3468	-0.00078431	0.84174	0.00049019	-0.50506	-0.00029412	582.3544118745583	107.09	1.166	107.12	106.59	107.75	0.036118					85	27	4	0	0	0	0.69995	1	11363	11363		31.53	6.0796	1	1230900			15491	2632	10630	10639	17904	17904					0.11863607136797327
IAKDIQFR	8	Unmodified	_IAKDIQFR_					0	0	0			REV__chr1:172591071-172602064|18|15.17|0.13|6.9|+|1|SUCO,SUCO|2	REV__chr1:172591071-172602064|18|15.17|0.13|6.9|+|1|SUCO,SUCO|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7865295410156	2	495.790184	989.565815	-1.7266	-0.00085603	-0.77004	-0.00038178	-2.4966	-0.0012378	495.78965520710443	43.767	0.5307	44.541	44.303	44.833	0.7738					29	12	3	0	0	0	0.93786	1	3989	3989		53.351	3.8154	1	863730	+		15492	15430	10631	10640	17905	17905					0.0706146654274562
IAKEKSTKAAS	11	Unmodified	_IAKEKSTKAAS_					0	0	0		nc|ENSG00000184465|A2RRH5-2|WDR27;nc|ENSG00000184465|A2RRH5|WDR27;ENSG00000184465|ENST00000448612|WDR27;ENST00000467418.1_1_6:170058029-170062491:-|nuORF;ENST00000546525.5_1_6:170034618-170062491:-|nuORF	nc|ENSG00000184465|A2RRH5-2|WDR27	nc|ENSG00000184465|A2RRH5-2|WDR27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.329833984375	2	567.32987	1132.64519	1.492	0.00084643	-1.3496	-0.00076566	0.14237	8.0771E-05	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.7144	1	9205	9205		29.17	0.020503	1	5346500			15493	7615	10632	10641	17906	17906					0.08417068706262398
IAKGAGSCSGP	11	Unmodified	_IAKGAGSCSGP_					0	0	0			REV__ENST00000355557.6_1_12:133656965-133657124:+|nuORF	REV__ENST00000355557.6_1_12:133656965-133657124:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.2333068847656	2	474.234384	946.454216	-2.3357	-0.0011076	-1.504	-0.00071325	-3.8397	-0.0018209	474.23360634784694	39.838	0.93525	39.847	39.428	40.363	0.0092812					32	21	2	0	0	0	0.66929	1	2809	2809		36.447	0.82846	1	349550	+		15494	25382	10633	10642	17907	17907					-0.021153358766810015
IAKHEMKP	8	Unmodified	_IAKHEMKP_					0	0	0		nc|ENSG00000134775|Q2V2M9-2|FHOD3;nc|ENSG00000134775|Q2V2M9|FHOD3;nc|ENSG00000134775|Q2V2M9-3|FHOD3;ENSG00000134775|ENST00000590592|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.97412109375	2	477.265487	952.516422	0.66509	0.00031743	-1.3248	-0.00063229	-0.65972	-0.00031486	477.26767008928107	21.894	0.11445	21.878	21.797	21.911	-0.016428					8	5	3	0	0	0	0.4196	1	615	615		26.796	0	1	23582			15495	3958	10634	10643	17908	17908					0.038264352623059494
IAKKASPV	8	Unmodified	_IAKKASPV_					0	0	0			REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	407.2668762207031	2	407.263271	812.511988	1.198	0.00048789	2.5321	0.0010312	3.7301	0.0015191	407.264225803813	36.139	1.6231	36.149	35.705	37.328	0.0092812					84	35	3	0	0	0	0.884	1	2350	2350		33.516	1.5607	1	219020	+		15496	16218	10635	10644	17909	17909					0.09823294111038194
IAKKASPV	8	Unmodified	_IAKKASPV_					0	0	0			REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.26495361328125	2	407.263271	812.511988	1.2778	0.0005204	2.6661	0.0010858	3.9439	0.0016062	407.26421657839876	37.517	0.96704	37.831	37.124	38.091	0.31312					61	23	4	0	0	0	0.80706	1	3002	3002		19.36	1.0356	1	1759800	+		15497	16218	10635	10644	17910	17910					0.09823294111038194
IAKKASPV	8	Unmodified	_IAKKASPV_					0	0	0			REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	407.263271	812.511988	1.2778	0.0005204	2.6661	0.0010858	3.9439	0.0016062	407.26421657839876	37.517	0.96704	37.831	37.124	38.091	0.31312	-0.036233	-0.00028565	NaN	19.36	61	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1759800	+		15498	16218	10635	10644							0.09823294111038194
IAKKASPV	8	Unmodified	_IAKKASPV_					0	0	0			REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	REV__nc|ENSG00000016864|Q68CQ7-2|GLT8D1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	407.263271	812.511988	0.42836	0.00017446	3.385	0.0013786	3.8134	0.001553	407.2645047451375	37.417	0.84881	37.903	37.325	38.174	0.48581	0.036233	0.00029991	NaN	19.36	56	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1479000	+		15499	16218	10635	10644							0.09823294111038194
IAKKAVRPPI	10	Unmodified	_IAKKAVRPPI_					0	0	0			REV__ENSG00000242732|ENST00000609883|RTL5	REV__ENSG00000242732|ENST00000609883|RTL5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.83984375	2	546.866226	1091.7179	1.2647	0.00069163	2.3268	0.0012724	3.5915	0.0019641	546.8673607077325	100.91	0.15991	100.96	100.9	101.06	0.046356					9	3	3	0	0	0	0.37624	1	10864	10864		16.473	10.16	1	210930	+		15500	23834	10636	10645	17911	17911					0.17570867290305614
IAKKVGST	8	Unmodified	_IAKKVGST_					0	0	0			REV__ENST00000567000.2_1_16:46729456-46731494:+|nuORF	REV__ENST00000567000.2_1_16:46729456-46731494:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.2522277832031	2	402.252903	802.491253	-0.18439	-7.417E-05	-0.65186	-0.00026221	-0.83625	-0.00033638	402.2525250450039	21.327	0.45784	20.699	20.494	20.952	-0.62835					20	11	2	0	0	0	0.80706	1	780	780		19.36	1.0356	1	322140	+		15501	17022	10637	10646	17912	17912					0.08210703731378999
IAKQWLERLER	11	Unmodified	_IAKQWLERLER_					0	0	0			REV__nc|ENSG00000065882|Q86TI0-2|TBC1D1	REV__nc|ENSG00000065882|Q86TI0-2|TBC1D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.282470703125	3	481.280654	1440.82013	2.8229	0.0013586	4.1588	0.0020016	6.9817	0.0033602	481.2820387831268	102.84	2.0906	102.8	102.18	104.27	-0.047005					125	50	4	0	0	0	0.77511	1	11309	11309		16.53	3.5724	1	829310	+		15502	16510	10638	10647	17913	17913					0.1173548857127571
IAKSAHSR	8	Unmodified	_IAKSAHSR_					0	0	0			REV__MER11B_dup109|chr4:246912-248001:-|1.1537234201781927|0.0844565193760445|3.77|63.0|45|1|anti-sense	REV__MER11B_dup109|chr4:246912-248001:-|1.1537234201781927|0.0844565193760445|3.77|63.0|45|1|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25152587890625	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87064	1	7268	7268		29.15	2.3535	1	2494100	+		15503	29642	10639	10648	17914	17914					0.04839453677379879
IAKTAVPTE	9	Unmodified	_IAKTAVPTE_					0	0	0		ENSG00000171722|ENST00000367935|SPATA46	ENSG00000171722|ENST00000367935|SPATA46	ENSG00000171722|ENST00000367935|SPATA46	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2688293457031	2	465.26875	928.522947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.675	1	80.675	80.175	81.175	0								0	0	0	0.30778	1	7455	7455		27.882	0	1				15504	6700	10640	10649	17915	17915					0.05582651694658125
IALAAFTT	8	Unmodified	_IALAAFTT_					0	0	0		ENSG00000204695|ENST00000641895|OR14J1	ENSG00000204695|ENST00000641895|OR14J1	ENSG00000204695|ENST00000641895|OR14J1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2338562011719	2	404.234179	806.453805	-1.2204	-0.00049332	-1.5408	-0.00062286	-2.7612	-0.0011162	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.82464	3	8134	8122;8134;8146		29.842	4.3914	1	2752600			15505	8480	10641	10650	17916;17917;17918	17917					0.04283612465758324
IALAAFTT	8	Unmodified	_IALAAFTT_					0	0	0		ENSG00000204695|ENST00000641895|OR14J1	ENSG00000204695|ENST00000641895|OR14J1	ENSG00000204695|ENST00000641895|OR14J1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2327880859375	2	404.234179	806.453805	-0.18723	-7.5686E-05	-2.7376	-0.0011067	-2.9249	-0.0011823	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.85277	2	8597	8571;8597		28.254	6.5519	1	4185000			15506	8480	10641	10650	17919;17920	17920					0.04283612465758324
IALAAFTT	8	Unmodified	_IALAAFTT_					0	0	0		ENSG00000204695|ENST00000641895|OR14J1	ENSG00000204695|ENST00000641895|OR14J1	ENSG00000204695|ENST00000641895|OR14J1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.2327575683594	2	404.234179	806.453805	0.76489	0.0003092	-3.732	-0.0015086	-2.9671	-0.0011994	404.2325671203917	85.114	3.6255	85.042	83.452	87.078	-0.07196					165	83	2	0	0	0	0.81548	3	8765	8765;8791;8803		29.842	5.6388	1	4970800			15507	8480	10641	10650	17921;17922;17923	17921					0.04283612465758324
IALAAFTT	8	Unmodified	_IALAAFTT_					0	0	0		ENSG00000204695|ENST00000641895|OR14J1	ENSG00000204695|ENST00000641895|OR14J1	ENSG00000204695|ENST00000641895|OR14J1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.2325134277344	2	404.234179	806.453805	-1.8204	-0.00073588	-0.96943	-0.00039188	-2.7898	-0.0011278	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.88915	1	8227	8227		35.201	13.498	1	4754100			15508	8480	10641	10650	17924	17924					0.04283612465758324
IALAAFTT	8	Unmodified	_IALAAFTT_					0	0	0		ENSG00000204695|ENST00000641895|OR14J1	ENSG00000204695|ENST00000641895|OR14J1	ENSG00000204695|ENST00000641895|OR14J1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2322082519531	2	404.234179	806.453805	-1.8251	-0.00073778	-1.1309	-0.00045714	-2.956	-0.0011949	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.81548	2	8431	8305;8431		21.702	4.84	1	3315300			15509	8480	10641	10650	17925;17926	17926					0.04283612465758324
IALAGALYVY	10	Unmodified	_IALAGALYVY_					0	0	0			REV__ENSG00000157570|ENST00000520358|TSPAN18	REV__ENSG00000157570|ENST00000520358|TSPAN18	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7774047851562	2	527.302593	1052.59063	0.44071	0.00023239	1.8581	0.00097979	2.2988	0.0012122	527.8045552803543	30.941	0.34724	30.945	30.796	31.144	0.0037212					9	7	2	0	0	0	0.37624	1	2102	2102		12.959	0	1	52467	+		15510	20550	10642	10651	17927	17927					0.06644101625465737
IALAHRKLESK	11	Unmodified	_IALAHRKLESK_					0	0	0		ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3	ENSG00000133657|ENST00000645319|ATP13A3	ENSG00000133657|ENST00000645319|ATP13A3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.9266357421875	3	422.594461	1264.76155	-1.6251	-0.00068677	-2.683	-0.0011338	-4.3081	-0.0018206	422.59320288156465	57.283	1.5202	57.283	56.985	58.505	0					113	60	2	0	0	0	0.74022	1	4989	4989		24.232	6.7638	1	124120			15511	3887	10643	10652	17928	17928					0.13976431996775318
IALAHRKLESK	11	Unmodified	_IALAHRKLESK_					0	0	0		ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3	ENSG00000133657|ENST00000645319|ATP13A3	ENSG00000133657|ENST00000645319|ATP13A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5927429199219	3	422.594461	1264.76155	-0.12961	-5.4774E-05	-3.0685	-0.0012967	-3.1981	-0.0013515	422.59301325163335	54.438	1.5298	54.43	53.553	55.082	-0.0077057					142	48	4	0	0	0	0.72374	2	4833	4816;4833		27.644	4.3124	1	1173800			15512	3887	10643	10652	17929;17930	17930					0.13976431996775318
IALAHRKLESK	11	Unmodified	_IALAHRKLESK_					0	0	0		ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3	ENSG00000133657|ENST00000645319|ATP13A3	ENSG00000133657|ENST00000645319|ATP13A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59307861328125	3	422.594461	1264.76155	-0.62547	-0.00026432	-2.6174	-0.0011061	-3.2429	-0.0013704	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.72892	1	4930	4930		26.75	5.064	1	1069500			15513	3887	10643	10652	17931	17931					0.13976431996775318
IALATALPL	9	Unmodified	_IALATALPL_					0	0	0			REV__nc|ENSG00000174600|Q99788-2|CMKLR1	REV__nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7876892089844	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.7932	1	3169	3169		25.45	0	1	448230	+		15514	22005	10644	10653	17932	17932					0.11308733942325944
IALAVVGGAL	10	Unmodified	_IALAVVGGAL_					0	0	0			REV__ENSG00000249581|ENST00000511148|CLRN2	REV__ENSG00000249581|ENST00000511148|CLRN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.284912109375	2	442.284203	882.553853	-1.4163	-0.00062639	1.7479	0.00077308	0.33165	0.00014668	442.2848988833296	48.138	1.9507	48.607	47.971	49.922	0.46941					81	48	3	0	0	0	0.51323	1	4593	4593		54.765	3.4292	1	2545800	+		15515	23865	10645	10654	17933	17933					0.10787849799578453
IALFLLFLFVQ	11	Unmodified	_IALFLLFLFVQ_					0	0	0			REV__ENSG00000181698|ENST00000641665|OR5T1	REV__ENSG00000181698|ENST00000641665|OR5T1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.27264404296875	3	441.940687	1322.80023	-0.15321	-6.7708E-05	-1.7148	-0.00075785	-1.868	-0.00082556	441.939780780595	53.674	1.5853	54.259	53.626	55.211	0.58474					102	37	3	0	0	0	0.1767	1	5360	5360		5.6988	0	1	401860	+		15516	22473	10646	10655	17934	17934					0.15174344578576893
IALFPRVPN	9	Unmodified	_IALFPRVPN_					0	0	0			REV__ENSG00000170950|ENST00000304801|PGK2	REV__ENSG00000170950|ENST00000304801|PGK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8094482421875	2	513.808377	1025.6022	-1.4174	-0.00072826	2.551	0.0013107	1.1336	0.00058246	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.78058	1	4118	4118		30.504	1.3541	1	1977600	+		15517	21704	10647	10656	17935	17935					0.09042343439477918
IALFPRVPN	9	Unmodified	_IALFPRVPN_					0	0	0			REV__ENSG00000170950|ENST00000304801|PGK2	REV__ENSG00000170950|ENST00000304801|PGK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.80908203125	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.78058	1	4184	4184		30.504	2.6214	1	926440	+		15518	21704	10647	10656	17936	17936					0.09042343439477918
IALFPRVPN	9	Unmodified	_IALFPRVPN_					0	0	0			REV__ENSG00000170950|ENST00000304801|PGK2	REV__ENSG00000170950|ENST00000304801|PGK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.81201171875	2	513.808377	1025.6022	0.43039	0.00022114	0.99842	0.000513	1.4288	0.00073413	513.8087390054711	58.075	0.33004	58.185	57.956	58.286	0.11027					23	15	2	0	0	0	0.77546	1	4934	4934		31.955	5.1588	1	117030	+		15519	21704	10647	10656	17937	17937					0.09042343439477918
IALFPRVPN	9	Unmodified	_IALFPRVPN_					0	0	0			REV__ENSG00000170950|ENST00000304801|PGK2	REV__ENSG00000170950|ENST00000304801|PGK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.2930297851562	2	513.808377	1025.6022	-0.024638	-1.2659E-05	0.31745	0.00016311	0.29281	0.00015045	513.8084262428757	53.665	0.87666	54.249	53.872	54.749	0.58474					26	20	2	0	0	0	0.20789	1	5463	5463		23.042	4.7181	1	95457	+		15520	21704	10647	10656	17938	17938					0.09042343439477918
IALIIRKLKKG	11	Unmodified	_IALIIRKLKKG_					0	0	0			REV__nc|ENSG00000100461|Q86U06-5|RBM23	REV__nc|ENSG00000100461|Q86U06-5|RBM23	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2976379394531	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.543	1	75.938	75.438	76.438	0.39507								0	0	0	0.56276	1	8547	8547		3.4087	0.19739	1		+		15521	29737	10648	10657	17939	17939					0.25959946829652836
IALIIRKLKKG	11	Unmodified	_IALIIRKLKKG_					0	0	0			REV__nc|ENSG00000100461|Q86U06-5|RBM23	REV__nc|ENSG00000100461|Q86U06-5|RBM23	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.29864501953125	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.805	1	77.205	76.705	77.705	0.39969								0	0	0	0.56276	1	8725	8725		6.001	0	1		+		15522	29737	10648	10657	17940	17940					0.25959946829652836
IALIIRKLKKG	11	Unmodified	_IALIIRKLKKG_					0	0	0			REV__nc|ENSG00000100461|Q86U06-5|RBM23	REV__nc|ENSG00000100461|Q86U06-5|RBM23	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.29736328125	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.989	1	76.557	76.057	77.057	0.56836								0	0	0	0.56276	1	8644	8644		3.2113	1.455	1		+		15523	29737	10648	10657	17941	17941					0.25959946829652836
IALKISQIH	9	Unmodified	_IALKISQIH_					0	0	0		ENST00000496758.1_1_9:71114067-71144569:+|nuORF;ENSG00000154330|ENST00000396396|PGM5	ENST00000496758.1_1_9:71114067-71144569:+|nuORF	ENST00000496758.1_1_9:71114067-71144569:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.820556640625	2	511.821484	1021.62842	0.52242	0.00026739	-2.1904	-0.0011211	-1.668	-0.00085369	511.8202077464212	82.213	1.1329	82.686	82.162	83.295	0.47383					61	27	3	0	0	0	0.74721	2	9518	9518;9560		37.159	4.3467	1	1651700			15524	5273	10649	10658	17942;17943	17942					0.11846612610952434
IALKLRAL	8	Unmodified	_IALKLRAL_					0	0	0			REV__nc|ENSG00000133107|Q9UBN4-4|TRPC4	REV__nc|ENSG00000133107|Q9UBN4-4|TRPC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.31414794921875	2	449.315838	896.617122	0.030616	1.3756E-05	-2.674	-0.0012015	-2.6434	-0.0011877	449.3144775449266	21.709	1.5646	21.081	20.162	21.727	-0.62835					91	40	3	0	0	0	0.89457	1	785	785		37.028	7.1869	1	615330	+		15525	19056	10650	10659	17944	17944					0.16467835307469159
IALLEKVAM	9	Unmodified	_IALLEKVAM_					0	0	0			REV__nc|ENSG00000203995|Q6WRX3-2|ZYG11A	REV__nc|ENSG00000203995|Q6WRX3-2|ZYG11A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.30084228515625	2	494.298996	986.583439	2.3073	0.0011405	1.1641	0.0005754	3.4713	0.0017159	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.72402	1	10709	10709		38.806	8.4884	1	53958000	+		15526	23450	10651	10660	17945	17945					0.08961045753392227
IALLELEKP	9	Unmodified	_IALLELEKP_					0	0	0		ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.317626953125	2	513.3157	1024.61685	-1.4711	-0.00075512	3.5902	0.0018429	2.1191	0.0010878	513.3174116406972	46.45	1.1988	46.45	46.135	47.334	0					64	33	3	0	0	0	0.76255	1	3520	3520		35.618	5.1146	1	153170			15527	5023	10652	10661	17946	17946					0.10552370796949617
IALLELEKP	9	Unmodified	_IALLELEKP_					0	0	0		ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3176879882812	2	513.3157	1024.61685	-1.338	-0.00068682	3.7943	0.0019477	2.4563	0.0012608	513.317527909064	55.758	0.98328	55.758	55.175	56.159	0					47	26	3	0	0	0	0.76255	1	4754	4754		35.618	1.4457	1	140760			15528	5023	10652	10661	17947	17947					0.10552370796949617
IALLELEKP	9	Unmodified	_IALLELEKP_					0	0	0		ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3187866210938	2	513.3157	1024.61685	-0.36813	-0.00018897	2.361	0.0012119	1.9928	0.001023	513.3169589115231	53.646	1.4284	53.622	52.782	54.21	-0.024754					61	35	3	0	0	0	0.6204	1	4771	4771		45.972	3.5761	1	246220			15529	5023	10652	10661	17948	17948					0.10552370796949617
IALLELEKP	9	Unmodified	_IALLELEKP_					0	0	0		ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	513.3157	1024.61685	-0.55499	-0.00028488	2.5518	0.0013099	1.9968	0.001025	513.3170547866824	46.667	1.0511	46.638	46.182	47.233	-0.028782	0.085068	0.00021067	NaN	35.618	48	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	170530			15530	5023	10652	10661							0.10552370796949617
IALLELEKP	9	Unmodified	_IALLELEKP_					0	0	0		ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	513.3157	1024.61685	-0.24549	-0.00012601	2.0699	0.0010625	1.8244	0.00093649	513.3168801599329	46.8	1.177	46.796	46.284	47.461	-0.0041618	0.24304	-0.00028406	NaN	35.618	46	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128670			15531	5023	10652	10661							0.10552370796949617
IALLELEKP	9	Unmodified	_IALLELEKP_					0	0	0		ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	513.3157	1024.61685	0.32644	0.00016757	1.6891	0.00086703	2.0155	0.0010346	513.3163953254575	46.467	0.87729	46.505	46.157	47.034	0.038181	-0.047635	-0.000675	NaN	35.618	39	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188460			15532	5023	10652	10661							0.10552370796949617
IALLKFVTD	9	Unmodified	_IALLKFVTD_					0	0	0			REV__ENSG00000163900|ENST00000421852|TMEM41A	REV__ENSG00000163900|ENST00000421852|TMEM41A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.31085205078125	2	510.310418	1018.60628	-0.38342	-0.00019566	0.58095	0.00029646	0.19753	0.0001008	510.3105307146198	79.291	0.70142	79.422	79.091	79.792	0.13086					56	21	3	0	0	0	0.22631	1	7533	7533		71.296	2.5089	1	423200	+		15533	20994	10653	10662	17949	17949					0.09772388142516775
IALLLMHR	8	Oxidation (M)	_IALLLM(Oxidation (M))HR_		IALLLM(1)HR		IALLLM(45)HR	0	0	1			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957458496094	2	491.796955	981.579357	0.38495	0.00018932	-2.7704	-0.0013625	-2.3854	-0.0011731	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.9159	1	4688	4688		44.531	7.372	1	2075300	+		15534	16914	10654	10663	17950	17950		245			0.08783001050346684
IALLLRLLA	9	Unmodified	_IALLLRLLA_					0	0	0			REV__chr5:56452645-56464009|17|27.82|0.09|8.32|-|0|None,LINC01948|1	REV__chr5:56452645-56464009|17|27.82|0.09|8.32|-|0|None,LINC01948|1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.350830078125	2	498.35242	994.690287	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.94	1	112.96	112.46	113.46	0.016953								0	0	0	0.36148	1	13676	13676		4.3163	0	1		+		15535	15856	10655	10664	17951	17951					0.19272964030062667
IALLQAVF	8	Unmodified	_IALLQAVF_					0	0	0			REV__ENSG00000187783|ENST00000389583|TMEM72	REV__ENSG00000187783|ENST00000389583|TMEM72	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.77093505859375	2	437.773471	873.53239	-1.5858	-0.00069423	-3.2177	-0.0014086	-4.8035	-0.0021029	437.77200270373476	39.973	1.5307	39.98	39.296	40.827	0.0065002					71	45	3	0	0	0	0.87807	1	2425	2425		31.579	1.7373	1	3015800	+		15536	22948	10656	10665	17952	17952					0.09056464770844741
IALLRNPW	8	Unmodified	_IALLRNPW_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.795654296875	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.86288	1	4439	4439		26.796	3.7536	1	781720			15537	8651	10657	10666	17953	17953					0.08446074267988024
IALLRNPW	8	Unmodified	_IALLRNPW_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7968444824219	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.696	1	66.661	66.161	67.161	-0.035217								0	0	0	0.29353	1	6382	6382		28.254	0	1				15538	8651	10657	10666	17954	17954					0.08446074267988024
IALLRNPW	8	Unmodified	_IALLRNPW_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7957458496094	2	491.795269	981.575986	-2.0246	-0.0009957	2.587	0.0012723	0.56235	0.00027656	491.79643169128343	45.478	1.3283	45.474	44.66	45.989	-0.0041618					90	30	4	0	0	0	0.88915	1	3625	3625		35.201	4.6971	1	433340			15539	8651	10657	10666	17955	17955					0.08446074267988024
IALLRNPW	8	Unmodified	_IALLRNPW_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7953186035156	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.86791	1	3983	3983		28.254	1.4582	1	1232600			15540	8651	10657	10666	17956	17956					0.08446074267988024
IALLRNPW	8	Unmodified	_IALLRNPW_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7955322265625	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.86288	1	3705	3705		26.796	3.7536	1	1346800			15541	8651	10657	10666	17957	17957					0.08446074267988024
IALLRNPW	8	Unmodified	_IALLRNPW_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79559326171875	2	491.795269	981.575986	-0.17405	-8.5598E-05	1.0809	0.00053159	0.90686	0.00044599	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.82464	1	3372	3372		21.702	0.7554	1	2994900			15542	8651	10657	10666	17958	17958					0.08446074267988024
IALLRNPW	8	Unmodified	_IALLRNPW_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7957458496094	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.86288	1	4627	4627		26.796	1.3459	1	1898900			15543	8651	10657	10666	17959	17959					0.08446074267988024
IALLRNPW	8	Unmodified	_IALLRNPW_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7940673828125	2	491.795269	981.575986	-1.1725	-0.00057664	2.0381	0.0010023	0.86553	0.00042567	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.89457	1	4372	4372		37.028	3.5129	1	3001500			15544	8651	10657	10666	17960	17960					0.08446074267988024
IALLYLPFV	9	Unmodified	_IALLYLPFV_					0	0	0		ENST00000553480.1_1_14:45332201-45332396:-|nuORF	ENST00000553480.1_1_14:45332201-45332396:-|nuORF	ENST00000553480.1_1_14:45332201-45332396:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8275146484375	2	524.825704	1047.63685	-0.038995	-2.0466E-05	2.2661	0.0011893	2.2272	0.0011689	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.78292	1	10702	10702		29.842	8.1392	1	26414000			15545	13698	10658	10667	17961	17961					0.1149416652756372
IALNKARN	8	Unmodified	_IALNKARN_					0	0	0			REV__nc|ENSG00000161791|Q8IVF7-2|FMNL3;REV__nc|ENSG00000157827|Q96PY5|FMNL2;REV__ENSG00000184922|ENST00000331495|FMNL1	REV__nc|ENSG00000161791|Q8IVF7-2|FMNL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2743835449219	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.85277	1	11232	11232		25.45	1.2474	1	19085000	+		15546	20778;22711;20566	10659	10668	17962	17962					0.08152313228504227
IALPWRIQ	8	Unmodified	_IALPWRIQ_					0	0	0			REV__ENSG00000157103|ENST00000287766|SLC6A1	REV__ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.803466796875	2	498.803094	995.591636	-1.4653	-0.00073091	2.6111	0.0013024	1.1457	0.00057149	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.86288	4	4233	4233;4324;4333;4354		37.028	7.8789	1	2964600	+		15547	20527	10660	10669	17963;17964;17965;17966	17963					0.09366360785031702
IALPWRIQ	8	Unmodified	_IALPWRIQ_					0	0	0			REV__ENSG00000157103|ENST00000287766|SLC6A1	REV__ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.80352783203125	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.86791	1	4417	4417		28.254	2.8041	1	2118300	+		15548	20527	10660	10669	17967	17967					0.09366360785031702
IALPWRIQ	8	Unmodified	_IALPWRIQ_					0	0	0			REV__ENSG00000157103|ENST00000287766|SLC6A1	REV__ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8023376464844	2	498.803094	995.591636	-0.601	-0.00029978	1.7229	0.00085937	1.1219	0.00055959	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.82464	3	4760	4514;4629;4760		37.028	8.7742	1	2240900	+		15549	20527	10660	10669	17968;17969;17970	17970					0.09366360785031702
IALPWRIQ	8	Unmodified	_IALPWRIQ_					0	0	0			REV__ENSG00000157103|ENST00000287766|SLC6A1	REV__ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8037109375	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.88915	2	4453	4453;4489		50.025	22.142	1	2702800	+		15550	20527	10660	10669	17971;17972	17971					0.09366360785031702
IALPWRIQ	8	Unmodified	_IALPWRIQ_					0	0	0			REV__ENSG00000157103|ENST00000287766|SLC6A1	REV__ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.8034973144531	2	498.803094	995.591636	-0.60409	-0.00030132	1.8273	0.00091145	1.2232	0.00061013	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.86791	3	4129	4129;4140;4196		29.842	6.2944	1	2424700	+		15551	20527	10660	10669	17973;17974;17975	17973					0.09366360785031702
IALPWRIQ	8	Unmodified	_IALPWRIQ_					0	0	0			REV__ENSG00000157103|ENST00000287766|SLC6A1	REV__ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.8035888671875	2	498.803094	995.591636	0.36192	0.00018053	0.83184	0.00041492	1.1938	0.00059545	498.8033596820182	51.857	1.6149	51.917	51.457	53.072	0.059719					144	50	4	0	0	0	0.87276	1	4169	4169		29.842	1.5873	1	2712200	+		15552	20527	10660	10669	17976	17976					0.09366360785031702
IALPWRIQ	8	Unmodified	_IALPWRIQ_					0	0	0			REV__ENSG00000157103|ENST00000287766|SLC6A1	REV__ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.803466796875	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.86791	1	4202	4202		28.254	0	1	2538600	+		15553	20527	10660	10669	17977	17977					0.09366360785031702
IALPWRIQ	8	Unmodified	_IALPWRIQ_					0	0	0			REV__ENSG00000157103|ENST00000287766|SLC6A1	REV__ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.803466796875	2	498.803094	995.591636	-0.49026	-0.00024454	1.7345	0.0008652	1.2443	0.00062066	498.8037935233339	49.549	1.6037	50.009	49.582	51.185	0.45983					103	38	4	0	0	0	0.81548	1	4865	4865		20.482	0	1	5854700	+		15554	20527	10660	10669	17978	17978					0.09366360785031702
IALPWRIQ	8	Unmodified	_IALPWRIQ_					0	0	0			REV__ENSG00000157103|ENST00000287766|SLC6A1	REV__ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.8034973144531	2	498.803094	995.591636	0.57569	0.00028715	0.65338	0.00032591	1.2291	0.00061306	498.80326110747177	49.369	1.5492	50.214	49.828	51.377	0.84501					106	37	4	0	0	0	0.89457	1	4892	4892		37.028	1.8278	1	6182600	+		15555	20527	10660	10669	17979	17979					0.09366360785031702
IALQLAHFRS	10	Unmodified	_IALQLAHFRS_					0	0	0		chr19:49710484-49710753|45|17.73|0.27|6.04|+|0|CPT1C,None|1	chr19:49710484-49710753|45|17.73|0.27|6.04|+|0|CPT1C,None|1	chr19:49710484-49710753|45|17.73|0.27|6.04|+|0|CPT1C,None|1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	578.3440551757812	2	578.33529	1154.65603	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.561	1	31.673	31.173	32.173	0.11156								0	0	0	0.45132	1	1452	1452		27.047	0.3544	1				15556	290	10661	10670	17980	17980					0.08488515871158597
IALQLDKLSKH	11	Unmodified	_IALQLDKLSKH_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.8860473632812	2	633.382437	1264.75032	0.48639	0.00030807	4.1073	0.0026015	4.5937	0.0029096	633.3849528535055	51.23	1.8238	51.28	50.541	52.365	0.049896					89	57	2	0	0	0	0.75779	1	4069	4069		22.58	8.4425	1	205950	+		15557	30102	10662	10671	17981	17981					0.1285360990261779
IALSKPLP	8	Unmodified	_IALSKPLP_					0	0	0			REV__ENSG00000115993|ENST00000332624|TRAK2	REV__ENSG00000115993|ENST00000332624|TRAK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7749938964844	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.884	2	3105	3105;3114		38.806	5.2906	1	10965000	+		15558	18168	10663	10672	17982;17983	17982					0.10712464770847419
IALSKPLP	8	Unmodified	_IALSKPLP_					0	0	0			REV__ENSG00000115993|ENST00000332624|TRAK2	REV__ENSG00000115993|ENST00000332624|TRAK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7750549316406	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.87479	1	3341	3341		30.504	1.3541	1	11423000	+		15559	18168	10663	10672	17984	17984					0.10712464770847419
IALSKPLP	8	Unmodified	_IALSKPLP_					0	0	0			REV__ENSG00000115993|ENST00000332624|TRAK2	REV__ENSG00000115993|ENST00000332624|TRAK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.77490234375	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.884	2	3138	3138;3230		52.299	2.2746	1	10266000	+		15560	18168	10663	10672	17985;17986	17985					0.10712464770847419
IALSKPLP	8	Unmodified	_IALSKPLP_					0	0	0			REV__ENSG00000115993|ENST00000332624|TRAK2	REV__ENSG00000115993|ENST00000332624|TRAK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7747497558594	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.84634	3	2837	2828;2837;2855		60.294	12.779	1	10440000	+		15561	18168	10663	10672	17987;17988;17989	17988					0.10712464770847419
IALSKPLP	8	Unmodified	_IALSKPLP_					0	0	0			REV__ENSG00000115993|ENST00000332624|TRAK2	REV__ENSG00000115993|ENST00000332624|TRAK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7750244140625	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.93529	1	2900	2900		52.299	4.3836	1	9723800	+		15562	18168	10663	10672	17990	17990					0.10712464770847419
IALSKPLP	8	Unmodified	_IALSKPLP_					0	0	0			REV__ENSG00000115993|ENST00000332624|TRAK2	REV__ENSG00000115993|ENST00000332624|TRAK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7739562988281	2	419.773471	837.53239	-1.7976	-0.00075458	3.9115	0.0016419	2.1139	0.00088736	419.77504327395843	41.402	2.6775	41.816	41.329	44.007	0.4139					184	68	5	0	0	0	0.884	1	3656	3656		33.516	3.0119	1	169320000	+		15563	18168	10663	10672	17991	17991					0.10712464770847419
IALSKPLP	8	Unmodified	_IALSKPLP_					0	0	0			REV__ENSG00000115993|ENST00000332624|TRAK2	REV__ENSG00000115993|ENST00000332624|TRAK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7750549316406	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.89457	1	3643	3643		37.028	1.8278	1	184570000	+		15564	18168	10663	10672	17992	17992					0.10712464770847419
IALSRISNFP	10	Unmodified	_IALSRISNFP_					0	0	0			REV__nc|ENSG00000168356|Q9UI33-2|SCN11A	REV__nc|ENSG00000168356|Q9UI33-2|SCN11A	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	559.3187866210938	2	559.321848	1116.62914	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.92	1	100.92	100.42	101.42	0								0	0	0	0.45132	1	10249	10249		40.778	1.5253	1		+		15565	21481	10664	10673	17993	17993					0.07549407259989493
IALVHTDSY	9	Unmodified	_IALVHTDSY_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.76177978515625	2	509.763832	1017.51311	-0.8431	-0.00042978	0.13064	6.6597E-05	-0.71245	-0.00036318	509.7637328887392	47.862	0.66115	48.332	48.007	48.668	0.46941					36	16	3	0	0	0	0.021904	1	4581	4581		123.99	38.629	1	1023400			15566	8381	10665	10674	17994	17994					0.005054636892737108
IALVHTDSY	9	Unmodified	_IALVHTDSY_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.7623596191406	2	509.763832	1017.51311	-0.0894	-4.5573E-05	-0.60562	-0.00030872	-0.69502	-0.00035429	509.7633816582952	47.653	0.58679	48.577	48.317	48.904	0.92315					34	14	3	0	0	0	0.0036154	2	4565	4565;4576		138.48	58.54	1	1014000			15567	8381	10665	10674	17995;17996	17995					0.005054636892737108
IALVKKLD	8	Unmodified	_IALVKKLD_					0	0	0			REV__ENSG00000204315|ENST00000375156|FKBPL	REV__ENSG00000204315|ENST00000375156|FKBPL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.27435302734375	2	450.299853	898.585153	1.3228	0.00059566	-3.994	-0.0017985	-2.6712	-0.0012029	450.29781528536387	92.842	0.82571	92.887	92.795	93.621	0.045448					31	19	3	0	0	0	0.4196	1	9797	9797		26.796	0	1	214580	+		15568	23482	10666	10675	17997	17997					0.13180422833659122
IALVNVLP	8	Unmodified	_IALVNVLP_					0	0	0		ENST00000527829.1_1_11:47435993-47436711:+|nuORF;ENST00000524886.1_1_11:47436414-47436911:+|nuORF;ENST00000524928.1_1_11:47436156-47436711:+|nuORF;nc|ENSG00000165915|Q96H72-2|SLC39A13;ENSG00000165915|ENST00000362021|SLC39A13	ENST00000527829.1_1_11:47435993-47436711:+|nuORF	ENST00000527829.1_1_11:47435993-47436711:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7748718261719	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.86791	2	3228	3228;3393		35.201	1.6851	1	10965000			15569	6135	10667	10676	17998;17999	17998					0.10712464770847419
IALVNVLP	8	Unmodified	_IALVNVLP_					0	0	0		ENST00000527829.1_1_11:47435993-47436711:+|nuORF;ENST00000524886.1_1_11:47436414-47436911:+|nuORF;ENST00000524928.1_1_11:47436156-47436711:+|nuORF;nc|ENSG00000165915|Q96H72-2|SLC39A13;ENSG00000165915|ENST00000362021|SLC39A13	ENST00000527829.1_1_11:47435993-47436711:+|nuORF	ENST00000527829.1_1_11:47435993-47436711:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2770080566406	2	419.773471	837.53239	0.2273	9.5415E-05	2.9433	0.0012355	3.1706	0.001331	419.7746409215357	44.614	0.98517	44.663	44.176	45.161	0.048996					38	23	2	0	0	0	0.4196	1	3093	3093		19.36	1.0356	1	126690			15570	6135	10667	10676	18000	18000					0.10712464770847419
IALVNVLP	8	Unmodified	_IALVNVLP_					0	0	0		ENST00000527829.1_1_11:47435993-47436711:+|nuORF;ENST00000524886.1_1_11:47436414-47436911:+|nuORF;ENST00000524928.1_1_11:47436156-47436711:+|nuORF;nc|ENSG00000165915|Q96H72-2|SLC39A13;ENSG00000165915|ENST00000362021|SLC39A13	ENST00000527829.1_1_11:47435993-47436711:+|nuORF	ENST00000527829.1_1_11:47435993-47436711:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.27679443359375	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.82464	1	3096	3096		21.702	2.3424	1	9723800			15571	6135	10667	10676	18001	18001					0.10712464770847419
IALVNVLP	8	Unmodified	_IALVNVLP_					0	0	0		ENST00000527829.1_1_11:47435993-47436711:+|nuORF;ENST00000524886.1_1_11:47436414-47436911:+|nuORF;ENST00000524928.1_1_11:47436156-47436711:+|nuORF;nc|ENSG00000165915|Q96H72-2|SLC39A13;ENSG00000165915|ENST00000362021|SLC39A13	ENST00000527829.1_1_11:47435993-47436711:+|nuORF	ENST00000527829.1_1_11:47435993-47436711:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	419.773471	837.53239	-1.8603	-0.00078092	5.1087	0.0021445	3.2483	0.0013636	419.77550157837715	44.646	1.0156	44.654	44.052	45.068	0.0084534	-0.0044344	0.00098136	NaN	19.36	40	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176780			15572	6135	10667	10676							0.10712464770847419
IALVTSPLL	9	Unmodified	_IALVTSPLL_					0	0	0		nc|ENSG00000137393|Q7Z419-2|RNF144B;ENSG00000137393|ENST00000259939|RNF144B	nc|ENSG00000137393|Q7Z419-2|RNF144B	nc|ENSG00000137393|Q7Z419-2|RNF144B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8006286621094	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.78058	1	3627	3627		30.504	1.3541	1	251610			15573	4194	10668	10677	18002	18002					0.11905003113804469
IALVTSPLL	9	Unmodified	_IALVTSPLL_					0	0	0		nc|ENSG00000137393|Q7Z419-2|RNF144B;ENSG00000137393|ENST00000259939|RNF144B	nc|ENSG00000137393|Q7Z419-2|RNF144B	nc|ENSG00000137393|Q7Z419-2|RNF144B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.8008728027344	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.7932	1	3676	3676		12.207	0	1	5050800			15574	4194	10668	10677	18003	18003					0.11905003113804469
IALWFTLDPR	10	Unmodified	_IALWFTLDPR_					0	0	0		ENST00000460031.5_1_1:43212370-43220777:-|nuORF;nc|ENSG00000117385|Q32P28-4|P3H1;ENSG00000117385|ENST00000296388|P3H1;nc|ENSG00000117385|Q32P28-3|P3H1	ENST00000460031.5_1_1:43212370-43220777:-|nuORF	ENST00000460031.5_1_1:43212370-43220777:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.58380126953125	3	411.232641	1230.67609	1.0739	0.00044164	1.972	0.00081096	3.046	0.0012526	411.2331039265313	25.856	0.77063	25.599	24.998	25.769	-0.25721					21	17	2	0	0	0	0.37624	1	1386	1386		38.754	13.628	1	41117			15575	12000	10669	10678	18004	18004					0.06998266811115172
IAMGKLHL	8	Unmodified	_IAMGKLHL_					0	0	0		ENST00000392238.2_1_2:203560687-203560738:+|nuORF	ENST00000392238.2_1_2:203560687-203560738:+|nuORF	ENST00000392238.2_1_2:203560687-203560738:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7679443359375	2	441.765123	881.515694	4.6911	0.0020724	1.7355	0.00076667	6.4266	0.0028391	441.76590394209916	107.02	1.0661	107.17	106.81	107.88	0.14929					95	39	4	0	0	0	0.86288	1	13076	13076		26.796	6.3143	1	3173300			15576	11014	10670	10679	18005	18005					0.07019640613259526
IAMIKQIGG	9	Unmodified	_IAMIKQIGG_					0	0	0			REV__ENSG00000057294|ENST00000340811|PKP2	REV__ENSG00000057294|ENST00000340811|PKP2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7773742675781	2	465.775688	929.536823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.156	1	80.1	79.6	80.6	-0.056503								0	0	0	0.28877	1	8046	8046		35.201	7.3185	1		+		15577	16426	10671	10680	18006	18006					0.06923605922111165
IAMIKQIGG	9	Unmodified	_IAMIKQIGG_					0	0	0			REV__ENSG00000057294|ENST00000340811|PKP2	REV__ENSG00000057294|ENST00000340811|PKP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774963378906	2	465.775688	929.536823	-0.087401	-4.0709E-05	4.1075	0.0019132	4.0201	0.0018725	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.69914	1	8179	8179		40.573	5.3719	1	1330000	+		15578	16426	10671	10680	18007	18007					0.06923605922111165
IAMIKQIGG	9	Unmodified	_IAMIKQIGG_					0	0	0			REV__ENSG00000057294|ENST00000340811|PKP2	REV__ENSG00000057294|ENST00000340811|PKP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7771911621094	2	465.775688	929.536823	0.5788	0.00026959	3.5248	0.0016418	4.1036	0.0019114	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.76996	1	7647	7647		33.516	9.3128	1	344270	+		15579	16426	10671	10680	18008	18008					0.06923605922111165
IAMIKQIGG	9	Unmodified	_IAMIKQIGG_					0	0	0			REV__ENSG00000057294|ENST00000340811|PKP2	REV__ENSG00000057294|ENST00000340811|PKP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77752685546875	2	465.775688	929.536823	0.60386	0.00028126	3.3703	0.0015698	3.9742	0.0018511	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.67235	1	7864	7864		42.474	5.446	1	1082300	+		15580	16426	10671	10680	18009	18009					0.06923605922111165
IAMLAFVY	8	Unmodified	_IAMLAFVY_					0	0	0			REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	REV__nc|ENSG00000083223|Q5VYS8-6|TUT7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2532958984375	2	464.254057	926.493561	-1.0566	-0.00049054	0.98159	0.00045571	-0.075022	-3.4829E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.84567	1	8414	8414		24.504	0	1	1603800	+		15581	16849	10672	10681	18010	18010					0.027374161448278755
IANAYEVVLKD	11	Unmodified	_IANAYEVVLKD_					0	0	0			REV__ENSG00000140526|ENST00000352732|ABHD2	REV__ENSG00000140526|ENST00000352732|ABHD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	617.8388671875	2	617.837528	1233.6605	-0.43979	-0.00027172	0.93161	0.00057559	0.49182	0.00030386	617.8377103162491	62.173	0.6953	62.561	62.274	62.969	0.38845					42	15	4	0	0	0	0.48313	1	6659	6659		53.089	10.225	1	393860	+		15582	19627	10673	10682	18011	18011					0.05301935503416644
IANGCENS	8	Unmodified	_IANGCENS_					0	0	0			REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.1701354980469	2	404.16871	806.322867	-1.318	-0.00053271	4.3696	0.0017661	3.0516	0.0012334	404.1707263168683	78.641	1.8199	78.641	78.235	80.055	0					146	66	5	0	0	0	0.87922	8	7239	7186;7196;7204;7221;7229;7239;7258;7276		47.916	13.777	1	3046600	+		15583	21795	10674	10683	18012;18013;18014;18015;18016;18017;18018;18019	18017					-0.08804146244585809
IANGCENS	8	Unmodified	_IANGCENS_					0	0	0			REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.170166015625	2	404.16871	806.322867	-0.18774	-7.5878E-05	3.363	0.0013592	3.1752	0.0012833	404.170229386983	78.542	2.4005	78.598	78.112	80.513	0.056114					177	77	5	0	0	0	0.90465	3	7594	7594;7619;7639		44.117	12.69	1	6189200	+		15584	21795	10674	10683	18020;18021;18022	18020					-0.08804146244585809
IANGCENS	8	Unmodified	_IANGCENS_					0	0	0			REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.1700744628906	2	404.16871	806.322867	0.028783	1.1633E-05	2.5917	0.0010475	2.6205	0.0010591	404.17015585403414	78.633	4.5965	78.579	78.135	82.731	-0.053558					226	127	5	0	0	0	0.87064	5	7955	7820;7831;7853;7875;7955		38.806	5.2906	1	6964800	+		15585	21795	10674	10683	18023;18024;18025;18026;18027	18027					-0.08804146244585809
IANGCENS	8	Unmodified	_IANGCENS_					0	0	0			REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.17034912109375	2	404.16871	806.322867	2.4772	0.0010012	0.73353	0.00029647	3.2107	0.0012977	404.16914392538314	78.456	2.0058	78.508	78.086	80.092	0.051682					179	62	5	0	0	0	0.87922	3	7760	7715;7738;7760		40.573	8.6178	1	6709200	+		15586	21795	10674	10683	18028;18029;18030	18030					-0.08804146244585809
IANGCENS	8	Unmodified	_IANGCENS_					0	0	0			REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.17022705078125	2	404.16871	806.322867	0.53213	0.00021507	2.6453	0.0010691	3.1774	0.0012842	404.1699082116052	78.324	2.0905	78.461	78.03	80.121	0.13667					171	70	5	0	0	0	0.89962	2	7374	7374;7393		38.806	6.8513	1	7251300	+		15587	21795	10674	10683	18031;18032	18031					-0.08804146244585809
IANGCENS	8	Unmodified	_IANGCENS_					0	0	0			REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	REV__ENST00000588534.1_1_19:2832263-2834847:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.1700744628906	2	404.16871	806.322867	1.2665	0.00051189	1.33	0.00053756	2.5966	0.0010494	404.16957479262703	77.837	2.6073	78.242	77.72	80.327	0.40531					162	61	5	0	0	0	0.91472	4	8841	8830;8841;8852;8900		53.351	19.836	1	19504000	+		15588	21795	10674	10683	18033;18034;18035;18036	18034					-0.08804146244585809
IANNIQSEA	9	Unmodified	_IANNIQSEA_					0	0	0			REV__L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|23|2|sense	REV__L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|23|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.2427673339844	2	480.243264	958.471974	-0.26606	-0.00012778	-0.2399	-0.00011521	-0.50597	-0.00024299	480.24316227273624	32.835	0.74734	32.78	32.401	33.148	-0.05434					33	17	3	0	0	0	0.55097	1	1949	1949		49.442	8.8689	1	181300	+		15589	29555	10675	10684	18037	18037					-0.008922973501853448
IAPAISLSA	9	Unmodified	_IAPAISLSA_					0	0	0		ENSG00000141646|ENST00000342988|SMAD4	ENSG00000141646|ENST00000342988|SMAD4	ENSG00000141646|ENST00000342988|SMAD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7513427734375	2	421.752736	841.490919	-1.7818	-0.0007515	-1.2969	-0.00054696	-3.0787	-0.0012985	421.7522177518738	76.828	1.8707	76.953	75.249	77.12	0.12485					132	61	3	0	0	0	0.7932	1	7132	7132		25.45	1.2474	1	487030			15590	4521	10676	10685	18038	18038					0.06383284011519663
IAPAKTPN	8	Unmodified	_IAPAKTPN_					0	0	0		ENST00000369983.3_1_10:104142211-104142316:+|nuORF	ENST00000369983.3_1_10:104142211-104142316:+|nuORF	ENST00000369983.3_1_10:104142211-104142316:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.24847412109375	2	406.237253	810.459953	-1.8127	-0.00073641	3.9764	0.0016154	2.1637	0.00087896	406.23867015802523	88.705	0.42445	88.912	88.831	89.256	0.20731					14	9	2	0	0	0	0.4196	1	8813	8813		40.573	0	1	82301			15591	10631	10677	10686	18039	18039					0.04714130697266228
IAPALVSKKLN	11	Unmodified	_IAPALVSKKLN_					0	0	0		ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF	ENSG00000074800|ENST00000234590|ENO1	ENSG00000074800|ENST00000234590|ENO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3665161132812	2	577.368798	1152.72304	-1.363	-0.00078696	-2.7149	-0.0015675	-4.0779	-0.0023544	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.64498	1	10705	10705		39.253	5.0803	1	14386000			15592	1314	10678	10687	18040	18040					0.1527912636227029
IAPAQFLSAS	10	Unmodified	_IAPAQFLSAS_					0	0	0			REV__nc|ENSG00000144331|Q569K4-2|ZNF385B	REV__nc|ENSG00000144331|Q569K4-2|ZNF385B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8138122558594	2	502.7742	1003.53385	2.3344	0.0011737	-0.35316	-0.00017756	1.9812	0.0009961	502.7734828847174	97.501	0.37269	97.446	97.272	97.644	-0.055542					11	8	2	0	0	0	0.37624	1	10486	10486		56.721	17.468	1	40312	+		15593	19881	10679	10688	18041	18041					0.03222054068953639
IAPEMWKP	8	Unmodified	_IAPEMWKP_					0	0	0			REV__ENSG00000163389|ENST00000295588|POGLUT1	REV__ENSG00000163389|ENST00000295588|POGLUT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2870788574219	2	486.254588	970.494624	-0.30499	-0.0001483	1.621	0.00078821	1.316	0.0006399	486.2551188928146	52.978	0.20659	53.593	53.49	53.696	0.61436					6	4	2	0	0	0	0.4196	1	5336	5336		42.474	18.272	1	134500	+		15594	20908	10680	10689	18042	18042					0.008196305137289528
IAPIALGW	8	Unmodified	_IAPIALGW_					0	0	0			REV__ENST00000368457.2_1_1:154930749-154930905:-|nuORF	REV__ENST00000368457.2_1_1:154930749-154930905:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.754638671875	2	420.752539	839.490525	2.8224	0.0011875	3.6252	0.0015253	6.4476	0.0027129	420.75391516461383	21.105	1.6401	21.041	20.066	21.706	-0.064058					103	72	2	0	0	0	0.84567	1	565	565		24.504	0	1	85377	+		15595	25596	10681	10690	18043	18043					0.06435909082324542
IAPIDQSPPL	10	Unmodified	_IAPIDQSPPL_					0	0	0			REV__ENSG00000056277|ENST00000370978|ZNF280C	REV__ENSG00000056277|ENST00000370978|ZNF280C	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3216552734375	2	525.795132	1049.57571	-0.4524	-0.00023787	0.47367	0.00024905	0.021265	1.1181E-05	525.795237721687	58.898	0.7739	58.932	58.652	59.426	0.033905					48	22	3	0	0	0	0.37624	1	5458	5458		44.377	0	1	176120	+		15596	16418	10682	10691	18044	18044					0.052906097574805244
IAPIFGKK	8	Unmodified	_IAPIFGKK_					0	0	0		ENSG00000226479|ENST00000426077|TMEM185B	ENSG00000226479|ENST00000426077|TMEM185B	ENSG00000226479|ENST00000426077|TMEM185B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2574157714844	2	437.281463	872.548374	-1.231	-0.00053827	-0.16652	-7.2817E-05	-1.3975	-0.00061109	437.2812359149996	30.12	1.0959	30.149	29.531	30.627	0.028618					40	24	2	0	0	0	0.4196	1	1965	1965		26.796	11.931	1	70203			15597	8713	10683	10692	18045	18045					0.10700171007749759
IAPKRQSIWL	10	Unmodified	_IAPKRQSIWL_					0	0	0			REV__ENSG00000150656|ENST00000358821|CNDP1	REV__ENSG00000150656|ENST00000358821|CNDP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	606.3696899414062	2	606.36659	1210.71863	1.0648	0.00064567	3.7089	0.0022489	4.7737	0.0028946	606.3686977940384	94.008	3.2437	94.236	93.32	96.564	0.22863					196	77	3	0	0	0	0.86348	1	9636	9636		31.53	7.0106	1	863300	+		15598	20216	10684	10693	18046	18046					0.12169661939378784
IAPLPDTLIV	10	Unmodified	_IAPLPDTLIV_					0	0	0		ENST00000489173.1_1_3:52325707-52327139:+|nuORF	ENST00000489173.1_1_3:52325707-52327139:+|nuORF	ENST00000489173.1_1_3:52325707-52327139:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3246459960938	2	526.323525	1050.6325	0.49555	0.00026082	1.9234	0.0010123	2.4189	0.0012731	526.3244353481127	63.57	1.605	63.693	63.334	64.939	0.12252					100	62	2	0	0	0	0.8488	1	5558	5558		17.365	0.89182	1	184350			15599	12645	10685	10694	18047	18047					0.10920657313999982
IAPTKPQKLP	10	Unmodified	_IAPTKPQKLP_					0	0	0		ENST00000522092.5_2_8:772178-1087480:+|nuORF	ENST00000522092.5_2_8:772178-1087480:+|nuORF	ENST00000522092.5_2_8:772178-1087480:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8403930664062	2	546.842416	1091.67028	-0.49529	-0.00027085	-3.9856	-0.0021795	-4.4809	-0.0024504	546.8402497724348	101.28	3.7061	101.28	100.69	104.39	0					228	91	5	0	0	0	0.3985	3	10404	10404;10414;10442		64.207	21.343	1	22090000			15600	13181	10686	10695	18048;18049;18050	18048					0.12811168299458586
IAQCIADAVEP	11	Unmodified	_IAQCIADAVEP_					0	0	0			REV__nc|ENSG00000133561|Q6P9H5-2|GIMAP6	REV__nc|ENSG00000133561|Q6P9H5-2|GIMAP6	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	565.2838134765625	2	565.281531	1128.54851	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.819	1	61.926	61.426	62.426	0.10743								0	0	0	0.56276	1	5375	5375		44.377	7.9304	1		+		15601	19082	10687	10696	18051	18051					-0.010622418452385318
IAQGQGPNY	9	Unmodified	_IAQGQGPNY_					0	0	0			REV__ENSG00000174469|ENST00000361727|CNTNAP2	REV__ENSG00000174469|ENST00000361727|CNTNAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.2332458496094	2	474.232699	946.450845	-2.3357	-0.0011076	2.05	0.00097216	-0.2857	-0.00013549	474.23360634784694	39.838	0.93525	39.847	39.428	40.363	0.0092812					32	21	2	0	0	0	0.72402	1	2819	2819		38.806	0	1	349550	+		15602	21995	10688	10697	18052	18052					-0.0245226265905103
IAQIRQHRWMR	11	Unmodified	_IAQIRQHRWMR_					0	0	0		ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.3030090332031	3	498.945611	1493.815	-0.33428	-0.00016679	-3.5615	-0.001777	-3.8958	-0.0019438	498.943712473938	51.815	0.73357	51.73	51.431	52.165	-0.084538					70	23	4	0	0	0	0.17811	1	4114	4114		14.694	4.5898	1	797920			15603	4546	10689	10698	18053	18053					0.08784906227651845
IARAQEWTVPI	11	Unmodified	_IARAQEWTVPI_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3635864257812	2	642.358962	1282.70337	2.0845	0.001339	4.4555	0.002862	6.54	0.004201	642.361819653108	110.23	1.6844	110.29	109.66	111.35	0.054062					109	58	2	0	0	0	0.64498	1	13297	13297		39.253	3.6345	1	2848100			15604	15003;5274	10690	10699	18054	18054					0.0733275035152019
IAREPMRW	8	Unmodified	_IAREPMRW_					0	0	0		nc|ENSG00000157110|Q93062-5|RBPMS	nc|ENSG00000157110|Q93062-5|RBPMS	nc|ENSG00000157110|Q93062-5|RBPMS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.7813110351562	2	529.781836	1057.54912	0.42447	0.00022488	-1.8692	-0.00099029	-1.4448	-0.00076541	529.7806756835065	55.443	1.0138	55.534	55.225	56.239	0.091167					76	34	3	0	0	0	0.85277	1	4647	4647		25.45	1.9275	1	514560			15605	15019	10691	10700	18055	18055					0.022646423851483632
IARHQTAS	8	Unmodified	_IARHQTAS_					0	0	0			REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2408752441406	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.87064	3	7670	7523;7588;7670		38.806	5.2906	1	716910	+		15606	27702	10692	10701	18056;18057;18058	18058					0.021228632977113193
IARHQTAS	8	Unmodified	_IARHQTAS_					0	0	0			REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.24066162109375	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.89494	2	7965	7965;8107		38.806	1.5408	1	1068200	+		15607	27702	10692	10701	18059;18060	18059					0.021228632977113193
IARHQTAS	8	Unmodified	_IARHQTAS_					0	0	0			REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.240966796875	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.87479	1	8220	8220		30.504	0	1	1238700	+		15608	27702	10692	10701	18061	18061					0.021228632977113193
IARHQTAS	8	Unmodified	_IARHQTAS_					0	0	0			REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2407531738281	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.89962	3	8222	7983;8222;8305		55.504	14.932	1	1244000	+		15609	27702	10692	10701	18062;18063;18064	18063					0.021228632977113193
IARHQTAS	8	Unmodified	_IARHQTAS_					0	0	0			REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2407531738281	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.87479	2	7675	7675;7825		32.812	2.3088	1	968500	+		15610	27702	10692	10701	18065;18066	18065					0.021228632977113193
IARHQTAS	8	Unmodified	_IARHQTAS_					0	0	0			REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	REV__ENST00000493753.1_1_21:42769576-42771509:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.24114990234375	2	442.240858	882.467164	0.21245	9.3954E-05	-0.1421	-6.2841E-05	0.070351	3.1112E-05	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.87479	1	9314	9314		30.504	0	1	1030200	+		15611	27702	10692	10701	18067	18067					0.021228632977113193
IARITTPIF	9	Unmodified	_IARITTPIF_					0	0	0		ENSG00000168772|ENST00000394767|CXXC4	ENSG00000168772|ENST00000394767|CXXC4	ENSG00000168772|ENST00000394767|CXXC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3180541992188	2	516.316035	1030.61752	0.04847	2.5026E-05	0.2935	0.00015154	0.34197	0.00017657	516.3158625296053	62.259	1.1248	62.813	62.214	63.339	0.55449					57	25	3	0	0	0	0.58151	1	6666	6666		47.916	1.9636	1	588050			15612	6433	10693	10702	18068	18068					0.10343210236646883
IARKSDLGVHL	11	Unmodified	_IARKSDLGVHL_					0	0	0		ENSG00000102974|ENST00000264010|CTCF;nc|ENSG00000102974|P49711-2|CTCF	ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5748291015625	3	403.575178	1207.70371	0.56211	0.00022685	-1.4705	-0.00059345	-0.90837	-0.00036659	403.57452270455985	81.745	1.4637	81.891	80.868	82.331	0.14551					81	33	4	0	0	0	0.67041	1	7742	7742		36.318	5.7488	1	2051300			15613	2039	10694	10703	18069	18069					0.10816170071393572
IARLHAKG	8	Unmodified	_IARLHAKG_					0	0	0			REV__ENSG00000183128|ENST00000369783|CALHM3	REV__ENSG00000183128|ENST00000369783|CALHM3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.2558898925781	2	433.271961	864.52937	0.73496	0.00031844	-4.1065	-0.0017792	-3.3715	-0.0014608	433.27048443868154	107.08	0.27317	107.17	106.95	107.23	0.091255					9	6	2	0	0	0	0.4196	1	11476	11476		25.45	4.9683	1	535400	+		15614	22579	10695	10704	18070	18070					0.09168634436696266
IARLHAKG	8	Unmodified	_IARLHAKG_					0	0	0			REV__ENSG00000183128|ENST00000369783|CALHM3	REV__ENSG00000183128|ENST00000369783|CALHM3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	433.271961	864.52937	1.8347	0.00079494	-6.6692	-0.0028896	-4.8345	-0.0020947	433.27012817294457	107	0.48187	107.1	106.75	107.23	0.10396	-0.034623	-0.0011789	NaN	25.45	25	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	858620	+		15615	22579	10695	10704							0.09168634436696266
IASEIIGLL	9	Unmodified	_IASEIIGLL_					0	0	0		nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI;chr15:89244044-89247629|58|10.98|0.6|4.18|+|ENST00000565255|FANCI,FANCI;nc|ENSG00000140525|Q9NVI1-4|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.790771484375	2	464.789318	927.564084	-1.1101	-0.00051598	3.984	0.0018517	2.8738	0.0013357	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.78851	1	2133	2133		28.254	1.4582	1	415400			15616	4441	10696	10705	18071	18071					0.09740412734140591
IASGRRGF	8	Unmodified	_IASGRRGF_					0	0	0			REV__nc|ENSG00000076864|P47736-2|RAP1GAP	REV__nc|ENSG00000076864|P47736-2|RAP1GAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.24505615234375	2	432.245944	862.477334	1.527	0.00066002	-2.6105	-0.0011284	-1.0836	-0.00046837	432.24467253428554	27.733	0.78223	27.478	27.115	27.897	-0.25465					38	17	3	0	0	0	0.88915	1	1640	1640		35.201	1.0282	1	288600	+		15617	29712	10697	10706	18072	18072					0.040594710229470365
IASGRRGF	8	Unmodified	_IASGRRGF_					0	0	0			REV__nc|ENSG00000076864|P47736-2|RAP1GAP	REV__nc|ENSG00000076864|P47736-2|RAP1GAP	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	432.245944	862.477334	-0.59688	-0.000258	-0.39009	-0.00016862	-0.98698	-0.00042662	432.2456538119775	27.651	1.704	27.554	27.094	28.798	-0.096947	0.038025	0.0010917	NaN	35.201	50	39	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	332260	+		15618	29712	10697	10706							0.040594710229470365
IASGRRGF	8	Unmodified	_IASGRRGF_					0	0	0			REV__nc|ENSG00000076864|P47736-2|RAP1GAP	REV__nc|ENSG00000076864|P47736-2|RAP1GAP	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	432.245944	862.477334	1.527	0.00066002	-2.6105	-0.0011284	-1.0836	-0.00046837	432.24467253428554	27.733	0.78223	27.478	27.115	27.897	-0.25465	-0.038025	-0.00082785	NaN	35.201	38	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	288600	+		15619	29712	10697	10706							0.040594710229470365
IASQSRATVL	10	Unmodified	_IASQSRATVL_					0	0	0			REV__nc|ENSG00000184634|Q93074-3|MED12;REV__nc|ENSG00000144893|Q86YW9-4|MED12L	REV__nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3037109375	2	523.303655	1044.59276	0.69703	0.00036476	-1.0638	-0.00055667	-0.36673	-0.00019191	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.86587	1	8332	8332		29.17	1.2878	1	3801600	+		15620	22696;15801	10698	10707	18073	18073					0.07224530363282611
IASVKRNQA	9	Unmodified	_IASVKRNQA_					0	0	0		nc|ENSG00000170448|Q6ZNB6-2|NFXL1;ENSG00000170448|ENST00000507489|NFXL1	nc|ENSG00000170448|Q6ZNB6-2|NFXL1	nc|ENSG00000170448|Q6ZNB6-2|NFXL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.7917785644531	2	493.790715	985.566878	0.7511	0.00037088	1.943	0.00095941	2.6941	0.0013303	493.7915393325102	91.749	1.815	92.199	91.714	93.529	0.44958					108	42	4	0	0	0	0.78983	1	10935	10935		27.882	0	1	2387900			15621	6591	10699	10708	18074	18074					0.07351680911665426
IATILLYAGVA	11	Unmodified	_IATILLYAGVA_					0	0	0		nc|ENSG00000150625|P51674-3|GPM6A;nc|ENSG00000150625|P51674-2|GPM6A;ENSG00000150625|ENST00000393658|GPM6A	nc|ENSG00000150625|P51674-3|GPM6A	nc|ENSG00000150625|P51674-3|GPM6A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8340454101562	2	552.8368	1103.65905	-0.74602	-0.00041243	-4.1168	-0.0022759	-4.8628	-0.0026884	552.8344221073519	82.073	1.2669	82.073	81.549	82.816	0					61	32	2	0	0	0	0.74555	1	7625	7625		23.042	1.0826	1	174970			15622	5075	10700	10709	18075	18075					0.1113634620535322
IATIRRGS	8	Unmodified	_IATIRRGS_					0	0	0		ENST00000500800.2_1_4:144435011-144435338:-|nuORF	ENST00000500800.2_1_4:144435011-144435338:-|nuORF	ENST00000500800.2_1_4:144435011-144435338:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2652587890625	2	437.266876	872.519199	-1.0744	-0.0004698	-1.4325	-0.00062639	-2.5069	-0.0010962	437.26614564718045	29.159	4.5071	29.129	28.693	33.2	-0.029209					167	103	2	0	0	0	0.87479	1	1810	1810		30.504	7.4612	1	552070			15623	12840	10701	10710	18076	18076					0.07784026711476599
IATLLTEI	8	Unmodified	_IATLLTEI_					0	0	0			REV__nc|ENSG00000149532|Q8N684-3|CPSF7	REV__nc|ENSG00000149532|Q8N684-3|CPSF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26568603515625	2	437.268219	872.521884	-1.6247	-0.00071044	-4.1739	-0.0018251	-5.7986	-0.0025355	437.26636390033156	24.021	1.8701	24.079	23.417	25.287	0.058165					191	86	4	0	0	0	0.86288	1	838	838		26.796	0	1	2248600	+		15624	29927	10702	10711	18077	18077					0.08052437325750361
IATSITAHG	9	Unmodified	_IATSITAHG_					0	0	0			REV__chr4:127886626-127887396|57|10.42|0.37|4.81|+|ENST00000507249|PLK4,PLK4	REV__chr4:127886626-127887396|57|10.42|0.37|4.81|+|ENST00000507249|PLK4,PLK4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796936035156	2	435.737617	869.460681	-1.3732	-0.00059835	1.3693	0.00059666	-0.0038677	-1.6853E-06	435.73804296525975	39.979	0.80112	39.936	39.579	40.38	-0.043697					52	18	4	0	0	0	0.20789	1	2941	2941		38.806	27.295	1	644760	+		15625	15819	10703	10712	18078	18078					0.020729253463287023
IATSITAHG	9	Unmodified	_IATSITAHG_					0	0	0			REV__chr4:127886626-127887396|57|10.42|0.37|4.81|+|ENST00000507249|PLK4,PLK4	REV__chr4:127886626-127887396|57|10.42|0.37|4.81|+|ENST00000507249|PLK4,PLK4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7800598144531	2	435.737617	869.460681	0.29686	0.00012935	-0.71988	-0.00031368	-0.42303	-0.00018433	435.737556074671	36.148	0.68135	36.157	35.797	36.478	0.0092773					24	14	2	0	0	0	0.20789	1	2365	2365		50.025	32.66	1	56923	+		15626	15819	10703	10712	18079	18079					0.020729253463287023
IATSITAHG	9	Unmodified	_IATSITAHG_					0	0	0			REV__chr4:127886626-127887396|57|10.42|0.37|4.81|+|ENST00000507249|PLK4,PLK4	REV__chr4:127886626-127887396|57|10.42|0.37|4.81|+|ENST00000507249|PLK4,PLK4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77996826171875	2	435.737617	869.460681	0.03208	1.3978E-05	0.054367	2.369E-05	0.086446	3.7668E-05	435.73745888546557	39.918	0.764	39.928	39.513	40.277	0.0092812					50	17	4	0	0	0	0.20789	1	2850	2850		40.573	9.0428	1	595740	+		15627	15819	10703	10712	18080	18080					0.020729253463287023
IATSITAHG	9	Unmodified	_IATSITAHG_					0	0	0			REV__chr4:127886626-127887396|57|10.42|0.37|4.81|+|ENST00000507249|PLK4,PLK4	REV__chr4:127886626-127887396|57|10.42|0.37|4.81|+|ENST00000507249|PLK4,PLK4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.780029296875	2	435.737617	869.460681	-0.11141	-4.8544E-05	0.1585	6.9066E-05	0.047096	2.0522E-05	435.7375601311923	39.915	0.64685	39.867	39.535	40.182	-0.04789					36	16	3	0	0	0	0.20789	1	2498	2498		47.916	3.3845	1	322220	+		15628	15819	10703	10712	18081	18081					0.020729253463287023
IAVALLQP	8	Unmodified	_IAVALLQP_					0	0	0		ENSG00000183161|ENST00000327470|FANCF	ENSG00000183161|ENST00000327470|FANCF	ENSG00000183161|ENST00000327470|FANCF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7669372558594	2	412.765646	823.516739	-1.3459	-0.00055553	3.4065	0.0014061	2.0606	0.00085056	412.76701040612045	40.372	1.7448	40.328	39.579	41.324	-0.043694					94	45	3	0	0	0	0.86288	1	2931	2931		26.796	0	1	625910			15629	7505	10704	10713	18082	18082					0.0979217825380374
IAVALLQP	8	Unmodified	_IAVALLQP_					0	0	0		ENSG00000183161|ENST00000327470|FANCF	ENSG00000183161|ENST00000327470|FANCF	ENSG00000183161|ENST00000327470|FANCF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7664794921875	2	412.765646	823.516739	-0.33758	-0.00013934	2.1313	0.00087971	1.7937	0.00074037	412.7669144536039	43.714	1.8956	43.657	42.672	44.567	-0.056812					93	46	3	0	0	0	0.87276	1	2988	2988		29.842	1.5873	1	313210			15630	7505	10704	10713	18083	18083					0.0979217825380374
IAVAMFIV	8	Unmodified	_IAVAMFIV_					0	0	0		ENSG00000196778|ENST00000641528|OR52K1;ENSG00000181963|ENST00000325719|OR52K2	ENSG00000196778|ENST00000641528|OR52K1	ENSG00000196778|ENST00000641528|OR52K1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.2574157714844	2	432.2566	862.498647	0.095673	4.1355E-05	2.9523	0.0012761	3.048	0.0013175	432.25767954187023	68.33	1.4604	68.877	68.284	69.744	0.54722					66	34	3	0	0	0	0.84567	1	7565	7565		24.504	0	1	472160			15631	8101	10705	10714	18084	18084					0.06189720007455435
IAVEQLAY	8	Unmodified	_IAVEQLAY_					0	0	0		nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3;ENSG00000109572|ENST00000513761|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	nc|ENSG00000109572|P51790-2|CLCN3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7323913574219	2	453.750193	905.485833	-0.27876	-0.00012649	1.0641	0.00048285	0.78538	0.00035637	453.75119264845654	54.731	0.33576	55.299	54.984	55.32	0.56836					9	7	2	0	0	0	0.4196	1	5587	5587		50.025	5.9077	1	103950			15632	14840	10706	10715	18085	18085					0.029309801489034726
IAVEVVRRLP	10	Unmodified	_IAVEVVRRLP_					0	0	0		ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.3687744140625	2	576.36659	1150.71863	-0.57265	-0.00033005	3.9091	0.0022531	3.3365	0.001923	576.3687132488117	43.612	2.6873	43.61	42.848	45.535	-0.0024452					116	63	3	0	0	0	0.85694	1	3515	3515		21.96	4.5949	1	229930			15633	5115	10707	10716	18086	18086					0.14929661939368088
IAVEVVRRLP	10	Unmodified	_IAVEVVRRLP_					0	0	0		ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3695068359375	2	576.36659	1150.71863	0.35965	0.00020729	3.6137	0.0020828	3.9734	0.0022901	576.3684427135254	43.121	1.8301	43.178	42.557	44.387	0.056744					99	45	3	0	0	0	0.85694	2	3022	3022;3031		21.96	1.5047	1	329330			15634	5115	10707	10716	18087;18088	18087					0.14929661939368088
IAVEVVRRLP	10	Unmodified	_IAVEVVRRLP_					0	0	0		ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3698120117188	2	576.36659	1150.71863	0.37302	0.000215	3.9242	0.0022618	4.2972	0.0024768	576.3686531735401	44.828	1.4469	44.877	44.259	45.706	0.048996					74	35	3	0	0	0	0.85251	1	3153	3153		19.997	0.89325	1	270470			15635	5115	10707	10716	18089	18089					0.14929661939368088
IAVEVVRRLP	10	Unmodified	_IAVEVVRRLP_					0	0	0		ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3699951171875	2	576.36659	1150.71863	0.26319	0.00015169	3.7476	0.00216	4.0107	0.0023117	576.3686493723599	41.978	1.1657	41.933	41.588	42.754	-0.045471					57	32	2	0	0	0	0.85981	1	2815	2815		35.152	0.97948	1	204820			15636	5115	10707	10716	18090	18090					0.14929661939368088
IAVEVVRRLP	10	Unmodified	_IAVEVVRRLP_					0	0	0		ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3698120117188	2	576.36659	1150.71863	0.16825	9.6976E-05	3.9929	0.0023014	4.1612	0.0023984	576.3687345088138	44.787	1.7768	44.718	44.033	45.809	-0.06863					89	43	3	0	0	0	0.82886	1	3158	3158		37.812	9.9293	1	271250			15637	5115	10707	10716	18091	18091					0.14929661939368088
IAVGHFRIL	9	Unmodified	_IAVGHFRIL_					0	0	0			REV__ENSG00000103540|ENST00000694978|CCP110	REV__ENSG00000103540|ENST00000694978|CCP110	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3157958984375	2	513.316369	1024.61818	-1.5202	-0.00078036	1.7283	0.00088716	0.20804	0.00010679	513.3171098240366	43.168	1.3566	43.168	42.754	44.111	0					83	32	4	0	0	0	0.7932	1	3102	3102		24.203	0	1	698430	+		15638	17419	10708	10717	18092	18092					0.10686049676360199
IAVGHFRIL	9	Unmodified	_IAVGHFRIL_					0	0	0			REV__ENSG00000103540|ENST00000694978|CCP110	REV__ENSG00000103540|ENST00000694978|CCP110	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3193359375	2	513.316369	1024.61818	-1.3651	-0.00070072	2.2159	0.0011375	0.85085	0.00043675	513.3175456130648	53.876	2.1608	53.876	52.509	54.67	0					97	64	3	0	0	0	0.7932	1	4464	4464		26.796	4.8362	1	276500	+		15639	17419	10708	10717	18093	18093					0.10686049676360199
IAVGHFRIL	9	Unmodified	_IAVGHFRIL_					0	0	0			REV__ENSG00000103540|ENST00000694978|CCP110	REV__ENSG00000103540|ENST00000694978|CCP110	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.31640625	2	513.316369	1024.61818	-0.0063971	-3.2837E-06	1.0165	0.00052178	1.0101	0.0005185	513.3168980017223	55.245	1.1626	55.238	54.853	56.015	-0.0077057					50	31	3	0	0	0	0.7932	1	4914	4914		20.482	2.1574	1	234670	+		15640	17419	10708	10717	18094	18094					0.10686049676360199
IAVGHFRIL	9	Unmodified	_IAVGHFRIL_					0	0	0			REV__ENSG00000103540|ENST00000694978|CCP110	REV__ENSG00000103540|ENST00000694978|CCP110	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3170776367188	2	513.316369	1024.61818	0.29738	0.00015265	0.021317	1.0942E-05	0.3187	0.00016359	513.3163353757171	43.153	1.1401	43.209	42.87	44.01	0.056744					71	27	3	0	0	0	0.7932	1	3011	3011		26.796	3.7536	1	375110	+		15641	17419	10708	10717	18095	18095					0.10686049676360199
IAVGPKQV	8	Unmodified	_IAVGPKQV_					0	0	0		nc|ENSG00000157152|Q92777-2|SYN2	nc|ENSG00000157152|Q92777-2|SYN2	nc|ENSG00000157152|Q92777-2|SYN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.257080078125	2	406.255446	810.496338	-0.060195	-2.4455E-05	3.8881	0.0015796	3.8279	0.0015551	406.2569131282484	33.505	1.7026	33.508	33.08	34.783	0.0030785					67	40	2	0	0	0	0.86288	1	1973	1973		26.796	1.3459	1	282580			15642	15020	10709	10718	18096	18096					0.08351007593989834
IAVGVIDIL	9	Unmodified	_IAVGVIDIL_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79229736328125	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.153	1	49.179	48.679	49.679	0.025574								0	0	0	0.32159	1	3786	3786		23.042	3.6825	1				15643	2358	10710	10719	18097	18097					0.10984716596760791
IAVGVIDIL	9	Unmodified	_IAVGVIDIL_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7904357910156	2	456.791861	911.569169	-1.6737	-0.00076455	2.8822	0.0013166	1.2085	0.00055202	456.79302395455574	41.288	2.2955	41.922	41.391	43.687	0.6339					167	59	4	0	0	0	0.7932	1	3605	3605		25.45	0	1	9370200			15644	2358	10710	10719	18098	18098					0.10984716596760791
IAVGVLIK	8	Unmodified	_IAVGVLIK_					0	0	0		nc|ENSG00000126903|P09131-2|SLC10A3;ENSG00000126903|ENST00000651600|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7854919433594	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.82419	1	1650	1650		13.775	0.81615	1	1606100			15645	3479	10711	10720	18099	18099					0.1398105515052066
IAVGVLIK	8	Unmodified	_IAVGVLIK_					0	0	0		nc|ENSG00000126903|P09131-2|SLC10A3;ENSG00000126903|ENST00000651600|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7856750488281	2	406.783839	811.553125	-0.045049	-1.8325E-05	3.807	0.0015486	3.7619	0.0015303	406.78524079935227	33.287	0.97472	33.291	32.894	33.869	0.0030785					79	22	4	0	0	0	0.87276	1	1985	1985		29.842	1.5873	1	346170			15646	3479	10711	10720	18100	18100					0.1398105515052066
IAVGVLIK	8	Unmodified	_IAVGVLIK_					0	0	0		nc|ENSG00000126903|P09131-2|SLC10A3;ENSG00000126903|ENST00000651600|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7851867675781	2	406.783839	811.553125	-0.34246	-0.00013931	4.1924	0.0017054	3.85	0.0015661	406.78540084150717	29.66	1.7951	29.616	28.901	30.696	-0.043095					140	52	4	0	0	0	0.81724	1	1538	1538		14.664	0	1	985720			15647	3479	10711	10720	18101	18101					0.1398105515052066
IAVGVLIK	8	Unmodified	_IAVGVLIK_					0	0	0		nc|ENSG00000126903|P09131-2|SLC10A3;ENSG00000126903|ENST00000651600|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7851257324219	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.81548	1	1756	1756		20.482	5.8177	1	1953100			15648	3479	10711	10720	18102	18102					0.1398105515052066
IAVGVLIK	8	Unmodified	_IAVGVLIK_					0	0	0		nc|ENSG00000126903|P09131-2|SLC10A3;ENSG00000126903|ENST00000651600|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.78515625	2	406.783839	811.553125	-0.45573	-0.00018539	4.0823	0.0016606	3.6266	0.0014752	406.7853476026277	33.431	0.94502	33.374	32.967	33.912	-0.056385					79	22	4	0	0	0	0.81548	1	1992	1992		20.482	1.1219	1	606440			15649	3479	10711	10720	18103	18103					0.1398105515052066
IAVGVLIK	8	Unmodified	_IAVGVLIK_					0	0	0		nc|ENSG00000126903|P09131-2|SLC10A3;ENSG00000126903|ENST00000651600|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78509521484375	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.82419	1	1675	1675		13.775	0	1	1965300			15650	3479	10711	10720	18104	18104					0.1398105515052066
IAVGVLIK	8	Unmodified	_IAVGVLIK_					0	0	0		nc|ENSG00000126903|P09131-2|SLC10A3;ENSG00000126903|ENST00000651600|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852478027344	2	406.783839	811.553125	1.9606	0.00079753	1.7235	0.0007011	3.6841	0.0014986	406.7843974234306	33.155	0.95889	33.153	32.87	33.829	-0.0016365					72	22	4	0	0	0	0.89457	1	1905	1905		37.028	1.8278	1	517740			15651	3479	10711	10720	18105	18105					0.1398105515052066
IAVGVLIK	8	Unmodified	_IAVGVLIK_					0	0	0		nc|ENSG00000126903|P09131-2|SLC10A3;ENSG00000126903|ENST00000651600|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852783203125	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.81724	1	1278	1278		14.664	0	1	1410200			15652	3479	10711	10720	18106	18106					0.1398105515052066
IAVGVLIK	8	Unmodified	_IAVGVLIK_					0	0	0		nc|ENSG00000126903|P09131-2|SLC10A3;ENSG00000126903|ENST00000651600|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.784912109375	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.86288	1	1785	1785		26.796	5.0938	1	1879900			15653	3479	10711	10720	18107	18107					0.1398105515052066
IAVGYVDDTQF	11	Unmodified	_IAVGYVDDTQF_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	614.2982177734375	2	614.298236	1226.58192	-0.5069	-0.00031139	0.72145	0.00044319	0.21455	0.0001318	614.2986837504682	76.339	0.62624	76.339	75.958	76.584	0					57	22	3	0	0	0	0.33509	1	6948	6948		65.465	21.088	1	280640			15654	8557	10712	10721	18108	18108					-0.02230916801681815
IAVGYVDDTQF	11	Unmodified	_IAVGYVDDTQF_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	614.2999877929688	2	614.298236	1226.58192	-0.37256	-0.00022886	0.71351	0.00043831	0.34095	0.00020945	614.2984584382294	76.181	0.6899	76.23	75.962	76.652	0.049194					46	20	3	0	0	0	0.41466	1	7364	7364		58.23	10.27	1	224410			15655	8557	10712	10721	18109	18109					-0.02230916801681815
IAVGYVDDTQF	11	Unmodified	_IAVGYVDDTQF_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	614.2979736328125	2	614.298236	1226.58192	-0.50306	-0.00030903	0.8077	0.00049617	0.30464	0.00018714	614.2986004374294	75.986	0.81822	76.033	75.719	76.538	0.046448					56	25	4	0	0	0	0.32318	2	7415	7407;7415		69.628	11.398	1	230950			15656	8557	10712	10721	18110;18111	18111					-0.02230916801681815
IAVGYVDDTQF	11	Unmodified	_IAVGYVDDTQF_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	614.2976684570312	2	614.298236	1226.58192	1.149	0.00070583	-0.85789	-0.000527	0.29112	0.00017883	614.2975668786466	76.006	0.74513	76.131	75.803	76.548	0.12485					59	22	3	0	0	0	0.3308	3	7090	7090;7101;7110		66.962	24.098	1	471350			15657	8557	10712	10721	18112;18113;18114	18112					-0.02230916801681815
IAVGYVDDTQF	11	Unmodified	_IAVGYVDDTQF_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	614.2980346679688	2	614.298236	1226.58192	0.69076	0.00042433	-0.60563	-0.00037204	0.085129	5.2295E-05	614.297808774193	75.94	0.73201	76.073	75.798	76.53	0.13325					52	21	3	0	0	0	0.48313	2	7095	7095;7104		53.089	6.6718	1	454880			15658	8557	10712	10721	18115;18116	18115					-0.02230916801681815
IAVGYVDDTQF	11	Unmodified	_IAVGYVDDTQF_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	614.298583984375	2	614.298236	1226.58192	-0.8218	-0.00050483	1.0383	0.00063782	0.21649	0.00013299	614.2987457658554	76.086	0.68958	76.176	75.847	76.537	0.089363					59	22	3	0	0	0	0.1837	1	7067	7067		80.455	25.732	1	406220			15659	8557	10712	10721	18117	18117					-0.02230916801681815
IAVGYVDDTQF	11	Unmodified	_IAVGYVDDTQF_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	614.298236	1226.58192	0.49624	0.00030484	-0.5361	-0.00032933	-0.039863	-2.4488E-05	614.2976106195676	75.877	0.61734	76.272	75.952	76.569	0.39507	0.091367	-0.00082661	NaN	80.455	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	308470			15660	8557	10712	10721							-0.02230916801681815
IAVGYVDDTQF	11	Unmodified	_IAVGYVDDTQF_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	614.298236	1226.58192	0.32478	0.00019951	0.30255	0.00018586	0.62734	0.00038537	614.2986923108715	75.738	0.4861	76.307	76.03	76.516	0.56835	0.126	0.00020376	NaN	80.455	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	268950			15661	8557	10712	10721							-0.02230916801681815
IAVHPEKGL	9	Unmodified	_IAVHPEKGL_					0	0	0		ENSG00000168702|ENST00000389484|LRP1B	ENSG00000168702|ENST00000389484|LRP1B	ENSG00000168702|ENST00000389484|LRP1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.2854309082031	2	482.284734	962.554916	0.3695	0.0001782	-0.73992	-0.00035685	-0.37042	-0.00017865	482.2842372573064	51.076	0.82391	51.828	51.532	52.356	0.75174					56	19	4	0	0	0	0.049188	1	5054	5054		108.09	8.7125	1	4451900			15662	6428	10713	10722	18118	18118					0.07214064168476853
IAVIKARYW	9	Unmodified	_IAVIKARYW_					0	0	0			REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3402099609375	2	560.337301	1118.66005	3.1377	0.0017581	1.8932	0.0010608	5.0309	0.002819	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.77546	3	11578	11465;11555;11578		31.955	2.2429	1	83033000	+		15663	19049	10714	10723	18119;18120;18121	18121					0.10546605364879724
IAVIKARYW	9	Unmodified	_IAVIKARYW_					0	0	0			REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3402709960938	2	560.337301	1118.66005	1.387	0.00077719	3.6811	0.0020627	5.0681	0.0028398	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.77546	1	11311	11311		31.955	6.5047	1	81463000	+		15664	19049	10714	10723	18122	18122					0.10546605364879724
IAVIKARYW	9	Unmodified	_IAVIKARYW_					0	0	0			REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3384399414062	2	560.337301	1118.66005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.48	1	104.67	104.17	105.17	0.18887								0	0	0	0.31472	1	12719	12719		25.45	2.4077	1		+		15665	19049	10714	10723	18123	18123					0.10546605364879724
IAVIKARYW	9	Unmodified	_IAVIKARYW_					0	0	0			REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3406372070312	2	560.337301	1118.66005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.12	1	105.27	104.77	105.77	0.15583								0	0	0	0.32159	1	12805	12805		23.042	3.0457	1		+		15666	19049	10714	10723	18124	18124					0.10546605364879724
IAVIKARYW	9	Unmodified	_IAVIKARYW_					0	0	0			REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3406372070312	2	560.337301	1118.66005	2.9009	0.0016255	2.2912	0.0012838	5.1921	0.0029093	560.3384791854071	101.98	1.2376	102.3	101.86	103.1	0.32511					132	30	6	0	0	0	0.62081	1	12503	12503		45.952	18.07	1	15824000	+		15667	19049	10714	10723	18125	18125					0.10546605364879724
IAVIKARYW	9	Unmodified	_IAVIKARYW_					0	0	0			REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.342529296875	2	560.337301	1118.66005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.03	1	104.3	103.8	104.8	0.26524								0	0	0	0.2969	1	12701	12701		31.955	1.4512	1		+		15668	19049	10714	10723	18126	18126					0.10546605364879724
IAVKAQICPK	10	Unmodified	_IAVKAQICPK_					0	0	0		ENSG00000165379|ENST00000298119|LRFN5	ENSG00000165379|ENST00000298119|LRFN5	ENSG00000165379|ENST00000298119|LRFN5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	535.8232421875	2	535.823169	1069.63179	-0.18564	-9.947E-05	-1.4013	-0.00075086	-1.587	-0.00085033	535.8221856190751	51.103	1.2568	51.018	50.29	51.547	-0.084538					72	35	3	0	0	0	0.85934	1	4059	4059		35.618	2.1027	1	279630			15669	6078	10715	10724	18127	18127					0.09975539393280997
IAVKGIRL	8	Unmodified	_IAVKGIRL_					0	0	0			REV__ENSG00000155903|ENST00000286364|RASA2	REV__ENSG00000155903|ENST00000286364|RASA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3001403808594	2	435.300188	868.585822	-1.3785	-0.00060007	1.5278	0.00066505	0.14927	6.4979E-05	435.30073733409733	75.396	1.3729	75.483	74.943	76.316	0.087639					63	36	2	0	0	0	0.81548	1	6967	6967		20.482	0	1	527430	+		15670	20454	10716	10725	18128	18128					0.14627262273359065
IAVKGIRL	8	Unmodified	_IAVKGIRL_					0	0	0			REV__ENSG00000155903|ENST00000286364|RASA2	REV__ENSG00000155903|ENST00000286364|RASA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3003234863281	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81548	1	8113	8113		20.482	1.1219	1	6323600	+		15671	20454	10716	10725	18129	18129					0.14627262273359065
IAVLDVLLCL	10	Unmodified	_IAVLDVLLCL_					0	0	0		nc|ENSG00000116062|P52701-4|MSH6;nc|ENSG00000116062|P52701-3|MSH6;ENSG00000116062|ENST00000234420|MSH6	nc|ENSG00000116062|P52701-4|MSH6	nc|ENSG00000116062|P52701-4|MSH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.3310546875	2	536.327753	1070.64095	0.096434	5.172E-05	3.0688	0.0016459	3.1652	0.0016976	536.3291981076486	31.673	0.59839	31.781	31.548	32.146	0.10707					29	13	3	0	0	0	0.81018	1	2195	2195		38.806	1.647	1	417060			15672	2896	10717	10726	18130	18130					0.10845887958976164
IAVLGNPK	8	Unmodified	_IAVLGNPK_					0	0	0		ENSG00000154265|ENST00000392676|ABCA5;nc|ENSG00000154265|Q8WWZ7-2|ABCA5	ENSG00000154265|ENST00000392676|ABCA5	ENSG00000154265|ENST00000392676|ABCA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2568054199219	2	406.255446	810.496338	0.27279	0.00011082	3.6804	0.0014952	3.9532	0.001606	406.25677816056157	49.48	2.6493	49.522	48.485	51.134	0.042236					135	72	3	0	0	0	0.85277	1	3837	3837		25.45	0	1	326490			15673	5270	10718	10727	18131	18131					0.08351007593989834
IAVLIISPS	9	Unmodified	_IAVLIISPS_					0	0	0			REV__ENST00000425888.1_1_3:196294085-196295387:-|nuORF	REV__ENST00000425888.1_1_3:196294085-196295387:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7912902832031	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.7932	1	3444	3444		17.365	3.5896	1	759950	+		15674	25143	10719	10728	18132	18132					0.10984716596760791
IAVLIISPS	9	Unmodified	_IAVLIISPS_					0	0	0			REV__ENST00000425888.1_1_3:196294085-196295387:-|nuORF	REV__ENST00000425888.1_1_3:196294085-196295387:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79071044921875	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.78536	1	3663	3663		29.15	0	1	608260	+		15675	25143	10719	10728	18133	18133					0.10984716596760791
IAVLIISPS	9	Unmodified	_IAVLIISPS_					0	0	0			REV__ENST00000425888.1_1_3:196294085-196295387:-|nuORF	REV__ENST00000425888.1_1_3:196294085-196295387:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7919616699219	2	456.791861	911.569169	0.23747	0.00010847	2.1705	0.00099146	2.408	0.0010999	456.79269786067573	42.365	2.4539	42.43	41.781	44.235	0.065037					168	63	3	0	0	0	0.7932	1	2907	2907		25.45	4.9683	1	556840	+		15676	25143	10719	10728	18134	18134					0.10984716596760791
IAVLIISPS	9	Unmodified	_IAVLIISPS_					0	0	0			REV__ENST00000425888.1_1_3:196294085-196295387:-|nuORF	REV__ENST00000425888.1_1_3:196294085-196295387:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7913513183594	2	456.791861	911.569169	0.30037	0.00013721	2.5195	0.0011509	2.8199	0.0012881	456.79289757972145	49.9	2.3678	49.942	48.602	50.969	0.04224					107	64	2	0	0	0	0.7932	1	3915	3915		25.45	6.0902	1	208080	+		15677	25143	10719	10728	18135	18135					0.10984716596760791
IAVLRLLLLI	10	Unmodified	_IAVLRLLLLI_					0	0	0			REV__ENSG00000185899|ENST00000332690|TAS2R60	REV__ENSG00000185899|ENST00000332690|TAS2R60	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8536376953125	2	568.910102	1135.80565	-1.1668	-0.00066381	-3.1245	-0.0017776	-4.2913	-0.0024414	568.9088022933325	102.24	0.24049	102.26	102.2	102.44	0.01989					7	5	2	0	0	0	0.37624	1	10939	10939		7.1934	0.45781	1	81366	+		15678	22802	10720	10729	18136	18136					0.24318068161096562
IAVLRLLLLI	10	Unmodified	_IAVLRLLLLI_					0	0	0			REV__ENSG00000185899|ENST00000332690|TAS2R60	REV__ENSG00000185899|ENST00000332690|TAS2R60	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.853271484375	2	568.910102	1135.80565	0.5209	0.00029634	1.7732	0.0010088	2.2941	0.0013051	568.9111181250294	102.11	0.1908	102.31	102.25	102.44	0.19484					8	4	2	0	0	0	0.37624	1	10752	10752		17.365	0	1	284620	+		15679	22802	10720	10729	18137	18137					0.24318068161096562
IAVLSRLAYIF	11	Unmodified	_IAVLSRLAYIF_					0	0	0		ENSG00000019485|ENST00000683152|PRDM11	ENSG00000019485|ENST00000683152|PRDM11	ENSG00000019485|ENST00000683152|PRDM11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.59234619140625	3	422.592058	1264.75434	-0.54234	-0.00022919	2.0814	0.00087957	1.539	0.00065038	422.5928449927352	47.261	3.402	47.732	47.137	50.539	0.47139					194	83	4	0	0	0	0.732	1	4447	4447		26.063	6.0329	1	3501000			15680	838	10721	10730	18138	18138					0.13255699396358978
IAVQNTKLT	9	Unmodified	_IAVQNTKLT_					0	0	0			REV__ENSG00000151014|ENST00000280614|NOCT	REV__ENSG00000151014|ENST00000280614|NOCT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.6487731933594	2	494.295299	986.576045	0.23195	0.00011465	-0.92446	-0.00045696	-0.69252	-0.00034231	494.2946644999373	45.215	0.3918	45.197	44.968	45.36	-0.018585					11	8	2	0	0	0	0.20789	1	3530	3530		23.523	0	1	58152	+		15681	20233	10722	10731	18139	18139					0.08222029477315118
IAVQQGTLRRR	11	Unmodified	_IAVQQGTLRRR_					0	0	0			REV__nc|ENSG00000166484|Q13164-3|MAPK7	REV__nc|ENSG00000166484|Q13164-3|MAPK7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.2554626464844	3	433.265227	1296.77385	4.8467	0.0020999	1.2527	0.00054277	6.0994	0.0026427	433.26598514290987	107.07	0.72257	107.22	106.87	107.59	0.14929					34	23	2	0	0	0	0.17575	1	13069	13069		39.873	5.7867	1	1283800	+		15682	27639	10723	10732	18140	18140					0.13733468459849973
IAVSRDRTTEL	11	Unmodified	_IAVSRDRTTEL_					0	0	0		AluSx1_dup105873|chr19:18572335-18572629:-|5.977422081314459|0.0188810566591458|8.31|63.0|11|3|sense	AluSx1_dup105873|chr19:18572335-18572629:-|5.977422081314459|0.0188810566591458|8.31|63.0|11|3|sense	AluSx1_dup105873|chr19:18572335-18572629:-|5.977422081314459|0.0188810566591458|8.31|63.0|11|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	630.8486328125	2	630.848958	1259.68336	0.93041	0.00058695	-0.30874	-0.00019477	0.62167	0.00039218	630.8485742155608	110.42	0.71348	110.5	110.27	110.98	0.073685					52	20	4	0	0	0	0.7342	1	11890	11890		25.574	0	1	2069700			15683	10	10724	10733	18141	18141					0.06390954620906086
IAVSTLILP	9	Unmodified	_IAVSTLILP_					0	0	0			REV__ENSG00000081148|ENST00000193391|IMPG2	REV__ENSG00000081148|ENST00000193391|IMPG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8013610839844	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.77546	1	3591	3591		31.955	5.1588	1	269820	+		15684	16818	10725	10734	18142	18142					0.11905003113804469
IAVVDIINMIN	11	Unmodified	_IAVVDIINMIN_					0	0	0			REV__nc|ENSG00000130037|P22460-2|KCNA5	REV__nc|ENSG00000130037|P22460-2|KCNA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5652770996094	3	405.565291	1213.67404	1.3715	0.00055625	-2.7789	-0.001127	-1.4074	-0.00057078	405.5640303977856	59.974	1.644	60.007	59.019	60.663	0.032822					112	41	3	0	0	0	0.71803	1	5484	5484		28.577	7.7396	1	297440	+		15685	18842	10726	10735	18143	18143					0.07575470011033758
IAVVKLTAP	9	Unmodified	_IAVVKLTAP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3013000488281	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.69624	1	1962	1962		40.778	7.2852	1	1057300	+		15686	21931	10727	10736	18144	18144					0.12628422833643071
IAVVKLTAP	9	Unmodified	_IAVVKLTAP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3013610839844	2	456.299853	910.585153	0.18552	8.4654E-05	2.8375	0.0012948	3.0231	0.0013794	456.3010022539405	33.29	1.7406	33.257	32.935	34.675	-0.032681					212	75	4	0	0	0	0.78536	1	1581	1581		29.15	3.5755	1	1700700	+		15687	21931	10727	10736	18145	18145					0.12628422833643071
IAVVLAVQV	9	Unmodified	_IAVVLAVQV_					0	0	0		ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3018798828125	2	456.299853	910.585153	0.060695	2.7695E-05	2.8141	0.0012841	2.8748	0.0013118	456.3009104320022	48.176	2.3719	48.166	47.652	50.024	-0.0093269					99	60	3	0	0	0	0.58151	2	3977	3977;3994		47.916	5.4411	1	293790			15688	6837	10728	10737	18146;18147	18146					0.1262842283366581
IAVVLAVQV	9	Unmodified	_IAVVLAVQV_					0	0	0		ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3008728027344	2	456.299853	910.585153	-0.76777	-0.00035033	3.2946	0.0015033	2.5268	0.001153	456.30128506086476	48.129	1.2211	48.104	47.704	48.926	-0.025116					68	30	3	0	0	0	0.58151	1	4095	4095		47.916	3.3845	1	255900			15689	6837	10728	10737	18148	18148					0.1262842283366581
IAVVLAVQV	9	Unmodified	_IAVVLAVQV_					0	0	0		ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.2999267578125	2	456.299853	910.585153	0.2216	0.00010112	0.88696	0.00040472	1.1086	0.00050584	456.3001222614761	40.857	1.8548	40.939	40.553	42.408	0.081345					89	55	2	0	0	0	0.5393	1	2647	2647		50.025	5.4935	1	381800			15690	6837	10728	10737	18149	18149					0.1262842283366581
IAVVLAVQV	9	Unmodified	_IAVVLAVQV_					0	0	0		ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3006286621094	2	456.299853	910.585153	0.2873	0.0001311	2.3096	0.0010538	2.5969	0.0011849	456.30080462463604	48.151	1.3839	48.189	47.742	49.126	0.037735					72	38	3	0	0	0	0.67235	1	3702	3702		42.474	0	1	274320			15691	6837	10728	10737	18150	18150					0.1262842283366581
IAVVLAVQV	9	Unmodified	_IAVVLAVQV_					0	0	0		ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3011169433594	2	456.299853	910.585153	-0.23118	-0.00010549	2.4791	0.0011312	2.2479	0.0010257	456.30086790597977	45.013	2.0189	44.944	43.946	45.965	-0.068634					97	50	2	0	0	0	0.7932	1	3250	3250		24.203	4.8428	1	498520			15692	6837	10728	10737	18151	18151					0.1262842283366581
IAVVLEEIP	9	Unmodified	_IAVVLEEIP_					0	0	0		ENSG00000116266|ENST00000370008|STXBP3	ENSG00000116266|ENST00000370008|STXBP3	ENSG00000116266|ENST00000370008|STXBP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956848144531	2	491.794601	981.574648	-0.70147	-0.00034498	3.2327	0.0015898	2.5312	0.0012448	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.7932	1	4513	4513		25.45	0	1	1759500			15693	2913	10729	10738	18152	18152					0.08312395388577443
IAVVLEEIP	9	Unmodified	_IAVVLEEIP_					0	0	0		ENSG00000116266|ENST00000370008|STXBP3	ENSG00000116266|ENST00000370008|STXBP3	ENSG00000116266|ENST00000370008|STXBP3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7956237792969	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.403	1	59.404	58.904	59.904	0.00051117								0	0	0	0.31472	1	5098	5098		25.45	1.2474	1				15694	2913	10729	10738	18153	18153					0.08312395388577443
IAVVSPTIL	9	Unmodified	_IAVVSPTIL_					0	0	0			REV__nc|ENSG00000092931|O43934-2|MFSD11	REV__nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7921447753906	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.72402	1	2613	2613		38.806	5.2906	1	1012300	+		15695	17041	10730	10739	18154	18154					0.10984716596760791
IAVVSPTIL	9	Unmodified	_IAVVSPTIL_					0	0	0			REV__nc|ENSG00000092931|O43934-2|MFSD11	REV__nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7903747558594	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.77546	2	4141	4141;4170		31.955	6.0902	1	186860	+		15696	17041	10730	10739	18155;18156	18155					0.10984716596760791
IAVVSPTIL	9	Unmodified	_IAVVSPTIL_					0	0	0			REV__nc|ENSG00000092931|O43934-2|MFSD11	REV__nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79229736328125	2	456.791861	911.569169	-1.3117	-0.00059915	2.7647	0.0012629	1.4531	0.00066375	456.79301301178594	40.135	1.4029	40.092	39.45	40.853	-0.043697					111	34	4	0	0	0	0.7932	1	2923	2923		26.796	0	1	1093900	+		15697	17041	10730	10739	18157	18157					0.10984716596760791
IAVVSPTIL	9	Unmodified	_IAVVSPTIL_					0	0	0			REV__nc|ENSG00000092931|O43934-2|MFSD11	REV__nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79180908203125	2	456.791861	911.569169	-1.2294	-0.00056156	2.5606	0.0011697	1.3313	0.00060812	456.79289004576646	40.059	1.2176	40.068	39.557	40.774	0.0092773					97	29	4	0	0	0	0.76996	1	2855	2855		33.516	1.5607	1	1129600	+		15698	17041	10730	10739	18158	18158					0.10984716596760791
IAVVSPTIL	9	Unmodified	_IAVVSPTIL_					0	0	0			REV__nc|ENSG00000092931|O43934-2|MFSD11	REV__nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79034423828125	2	456.791861	911.569169	0.05486	2.506E-05	2.6152	0.0011946	2.6701	0.0012197	456.79295826454774	49.784	2.1713	49.788	48.709	50.88	0.0035973					85	53	2	0	0	0	0.77546	2	4278	4235;4278		31.955	4.9683	1	208660	+		15699	17041	10730	10739	18159;18160	18160					0.10984716596760791
IAVVSPTIL	9	Unmodified	_IAVVSPTIL_					0	0	0			REV__nc|ENSG00000092931|O43934-2|MFSD11	REV__nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79156494140625	2	456.791861	911.569169	-0.051128	-2.3355E-05	1.9525	0.00089189	1.9014	0.00086853	456.79265367527273	40.074	1.5514	40.027	39.34	40.891	-0.04789					131	49	4	0	0	0	0.69914	1	2520	2520		40.573	0	1	940180	+		15700	17041	10730	10739	18161	18161					0.10984716596760791
IAVVVKYLF	9	Unmodified	_IAVVVKYLF_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3609619140625	2	526.331153	1050.64775	0.036865	1.9403E-05	2.6184	0.0013781	2.6552	0.0013975	526.3327414971048	33.286	0.27274	33.285	33.081	33.353	-0.0016365					6	5	2	0	0	0	0.20789	1	1957	1957		50.025	0	1	23745			15701	2075	10731	10740	18162	18162					0.12445568901830484
IAVWPQRRKPF	11	Unmodified	_IAVWPQRRKPF_					0	0	0			REV__ENST00000538923.1_1_11:94226040-94226943:-|nuORF	REV__ENST00000538923.1_1_11:94226040-94226943:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.60870361328125	3	466.610334	1396.80917	-1.7237	-0.0008043	-3.3575	-0.0015667	-5.0812	-0.0023709	466.60870138635494	100.22	2.0707	100.39	99.305	101.38	0.17199					124	48	3	0	0	0	0.78085	1	10396	10396		15.333	1.8252	1	463800	+		15702	25040	10732	10741	18163	18163					0.12664130987627686
IAWPPPTEL	9	Unmodified	_IAWPPPTEL_					0	0	0		nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1;ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1	nc|ENSG00000050405|Q9UHB6-3|LIMA1	nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2817993164062	2	512.279118	1022.54368	-0.052063	-2.6671E-05	4.432	0.0022704	4.3799	0.0022437	512.2812910993212	86.454	3.487	86.521	85.51	88.997	0.067436					149	81	2	0	0	0	0.77546	1	8790	8790		31.955	0	1	329990			15703	994	10733	10742	18164	18164					0.033312420743072835
IAWPPPTEL	9	Unmodified	_IAWPPPTEL_					0	0	0		nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1;ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1	nc|ENSG00000050405|Q9UHB6-3|LIMA1	nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.28125	2	512.279118	1022.54368	1.2711	0.00065114	3.0878	0.0015818	4.3588	0.0022329	512.2806294768477	86.671	3.241	86.597	85.234	88.475	-0.074005					135	75	2	0	0	0	0.5393	2	8989	8965;8989		50.025	0	1	387010			15704	994	10733	10742	18165;18166	18166					0.033312420743072835
IAWPPPTEL	9	Unmodified	_IAWPPPTEL_					0	0	0		nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1;ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1	nc|ENSG00000050405|Q9UHB6-3|LIMA1	nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2835083007812	2	512.279118	1022.54368	0.38138	0.00019537	3.97	0.0020338	4.3514	0.0022291	512.2810762358159	86.258	3.4931	86.314	85.063	88.556	0.055649					143	81	2	0	0	0	0.5393	3	8733	8733;8823;8882		50.025	0	1	344420			15705	994	10733	10742	18167;18168;18169	18167					0.033312420743072835
IAWPPPTEL	9	Unmodified	_IAWPPPTEL_					0	0	0		nc|ENSG00000050405|Q9UHB6-3|LIMA1;nc|ENSG00000050405|Q9UHB6-2|LIMA1;nc|ENSG00000050405|Q9UHB6-5|LIMA1;ENSG00000050405|ENST00000341247|LIMA1;nc|ENSG00000050405|Q9UHB6-4|LIMA1	nc|ENSG00000050405|Q9UHB6-3|LIMA1	nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.281982421875	2	512.279118	1022.54368	0.68771	0.0003523	3.6398	0.0018646	4.3276	0.0022169	512.280910573943	86.397	3.3825	86.546	85.297	88.68	0.14902					148	79	2	0	0	0	0.5393	1	8573	8573		50.025	0	1	371240			15706	994	10733	10742	18170	18170					0.033312420743072835
IAWSSGRKSR	10	Unmodified	_IAWSSGRKSR_					0	0	0			REV__ENST00000490638.5_1_9:35660467-35660770:-|nuORF	REV__ENST00000490638.5_1_9:35660467-35660770:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3185424804688	2	574.320171	1146.62579	0.59155	0.00033974	-1.7492	-0.0010046	-1.1577	-0.00066488	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.54701	1	9794	9794		52.937	16.49	1	1777600	+		15707	27638	10734	10743	18171	18171					0.0583415720600442
IAYETRWRRHR	11	Unmodified	_IAYETRWRRHR_					0	0	0			REV__ENSG00000170209|ENST00000303941|ANKK1	REV__ENSG00000170209|ENST00000303941|ANKK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.9705810546875	3	515.28328	1542.82801	0.88899	0.00045808	3.2312	0.001665	4.1202	0.0021231	515.2847225676868	17.764	0.22698	17.282	17.192	17.419	-0.48256					7	4	2	0	0	0	0.18238	1	294	294		13.508	1.5756	1	29132	+		15708	21635	10735	10744	18172	18172					0.07831060611374596
IAYLSIIIN	9	Unmodified	_IAYLSIIIN_					0	0	0			REV__ENSG00000154309|ENST00000675850|DISP1	REV__ENSG00000154309|ENST00000675850|DISP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.81292724609375	2	510.310418	1018.60628	-1.2754	-0.00065085	1.5317	0.00078164	0.25629	0.00013079	510.3110295003225	79.313	0.80144	79.412	79.114	79.915	0.098694					56	25	3	0	0	0	0.58151	1	7501	7501		47.916	3.7988	1	419210	+		15709	20381	10736	10745	18173	18173					0.09772388142528143
IAYNPNGNAL	10	Unmodified	_IAYNPNGNAL_					0	0	0		ENST00000543420.5_1_12:10464095-10467389:+|nuORF;ENST00000539374.1_1_12:10464095-10467389:+|nuORF;nc|ENSG00000134539|Q13241-3|KLRD1;ENSG00000134539|ENST00000336164|KLRD1;nc|ENSG00000134539|Q13241-2|KLRD1	ENST00000543420.5_1_12:10464095-10467389:+|nuORF	ENST00000543420.5_1_12:10464095-10467389:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7676391601562	2	523.766906	1045.51926	0.89554	0.00046906	-1.0433	-0.00054645	-0.14777	-7.7396E-05	523.7663129823885	53.949	0.79308	54.36	54.034	54.827	0.41127					48	18	4	0	0	0	0.19278	3	5454	5454;5464;5490		87.754	36.419	1	2607300			15710	13476	10737	10746	18174;18175;18176	18174					-0.0016801807919364364
IAYNPNGNAL	10	Unmodified	_IAYNPNGNAL_					0	0	0		ENST00000543420.5_1_12:10464095-10467389:+|nuORF;ENST00000539374.1_1_12:10464095-10467389:+|nuORF;nc|ENSG00000134539|Q13241-3|KLRD1;ENSG00000134539|ENST00000336164|KLRD1;nc|ENSG00000134539|Q13241-2|KLRD1	ENST00000543420.5_1_12:10464095-10467389:+|nuORF	ENST00000543420.5_1_12:10464095-10467389:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7664794921875	2	523.766906	1045.51926	-0.19681	-0.00010308	0.33468	0.00017529	0.13787	7.2212E-05	523.7668329034858	53.775	0.751	54.36	54.039	54.79	0.58474					49	17	4	0	0	0	0.017366	4	5454	5445;5454;5466;5479		124.59	54.927	1	2906000			15711	13476	10737	10746	18177;18178;18179;18180	18178					-0.0016801807919364364
IAYPHLRI	8	Unmodified	_IAYPHLRI_					0	0	0		ENST00000550009.1_1_12:120875908-120876378:+|nuORF;ENSG00000111775|ENST00000229379|COX6A1	ENST00000550009.1_1_12:120875908-120876378:+|nuORF	ENST00000550009.1_1_12:120875908-120876378:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.2958984375	2	491.795269	981.575986	-0.95582	-0.00047007	1.6941	0.00083313	0.73824	0.00036307	491.79612787684647	68.727	0.97743	68.792	68.154	69.131	0.065514					60	39	2	0	0	0	0.81548	1	6142	6142		20.482	1.1219	1	97450			15712	2611	10738	10747	18181	18181					0.08446074267976655
ICCKNRRG	8	Unmodified	_ICCKNRRG_					0	0	0		ENST00000493722.1_1_7:108205455-108210073:-|nuORF;ENST00000468884.1_1_7:108195296-108210013:-|nuORF;ENST00000412935.1_1_7:108209003-108210073:-|nuORF;ENST00000489738.1_1_7:108143058-108210073:-|nuORF;ENST00000484452.1_1_7:108206198-108210073:-|nuORF;ENSG00000177683|ENST00000415914|THAP5	ENST00000493722.1_1_7:108205455-108210073:-|nuORF	ENST00000493722.1_1_7:108205455-108210073:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.24578857421875	2	475.244563	948.474574	0.019063	9.0596E-06	1.5904	0.00075581	1.6094	0.00076487	475.24524118792397	32.051	0.73082	32.177	31.903	32.634	0.12643					29	16	3	0	0	0	0.84634	1	2219	2219		60.294	1.512	1	266730			15713	12737	10739	10748	18182	18182					-0.001724436978634003
ICCQLNSKV	9	Unmodified	_ICCQLNSKV_					0	0	0			REV__ENSG00000139567|ENST00000388922|ACVRL1	REV__ENSG00000139567|ENST00000388922|ACVRL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.25811767578125	2	504.254262	1006.49397	0.42308	0.00021334	2.9406	0.0014828	3.3636	0.0016961	504.2558791145955	70.964	0.77337	71.511	71.049	71.822	0.54756					34	18	2	0	0	0	0.55097	1	7919	7919		49.442	1.7842	1	326120	+		15714	19550	10740	10749	18183	18183					-0.009015321976335144
ICCQLNSKV	9	Unmodified	_ICCQLNSKV_					0	0	0			REV__ENSG00000139567|ENST00000388922|ACVRL1	REV__ENSG00000139567|ENST00000388922|ACVRL1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	504.254262	1006.49397	-0.75708	-0.00038176	4.0718	0.0020532	3.3147	0.0016715	504.2563578885656	71.022	0.91853	71.406	70.915	71.834	0.38449	-0.052398	0.00026551	NaN	49.442	36	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	246050	+		15715	19550	10740	10749							-0.009015321976335144
ICCQLNSKV	9	Unmodified	_ICCQLNSKV_					0	0	0			REV__ENSG00000139567|ENST00000388922|ACVRL1	REV__ENSG00000139567|ENST00000388922|ACVRL1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	504.254262	1006.49397	0.42308	0.00021334	2.9406	0.0014828	3.3636	0.0016961	504.2558791145955	70.964	0.77337	71.511	71.049	71.822	0.54756	0.052398	-0.00087534	NaN	49.442	34	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	326120	+		15716	19550	10740	10749							-0.009015321976335144
ICDKGIFVRP	10	Unmodified	_ICDKGIFVRP_					0	0	0			REV__ENSG00000173221|ENST00000237858|GLRX	REV__ENSG00000173221|ENST00000237858|GLRX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3199462890625	2	574.318251	1146.62195	0.81882	0.00047026	1.348	0.00077417	2.1668	0.0012444	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.85981	1	9737	9737		35.152	0.97948	1	1866200	+		15717	21903	10741	10750	18184	18184					0.05450351387912633
ICFNKILRN	9	Unmodified	_ICFNKILRN_					0	0	0		ENST00000300107.7_1_15:65442808-65442961:-|nuORF	ENST00000300107.7_1_15:65442808-65442961:-|nuORF	ENST00000300107.7_1_15:65442808-65442961:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.8203735351562	2	560.818418	1119.62228	0.38825	0.00021774	2.0362	0.0011419	2.4245	0.0013597	560.8194818178797	92.394	2.729	92.618	91.343	94.072	0.22352					209	64	4	0	0	0	0.7932	1	9302	9302		25.45	0.93098	1	816880			15718	9791	10742	10751	18185	18185					0.06725771107767287
ICIELMQILA	10	Unmodified	_ICIELMQILA_					0	0	0			REV__ENSG00000129048|ENST00000249887|ACKR4	REV__ENSG00000129048|ENST00000249887|ACKR4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.76806640625	2	573.816696	1145.61884	-0.57111	-0.00032771	0.058136	3.336E-05	-0.51298	-0.00029435	573.8168542104244	60.105	0.64711	60.658	60.355	61.003	0.55323					29	17	2	0	0	0	0.37624	1	6406	6406		56.721	7.185	1	581500	+		15719	18803	10743	10752	18186	18186					0.05185340218895362
ICILRSVLP	9	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))ILRSVLP_	IC(1)ILRSVLP		IC(42)ILRSVLP		0	1	0		ENST00000297661.8_1_9:34251701-34251866:+|nuORF	ENST00000297661.8_1_9:34251701-34251866:+|nuORF	ENST00000297661.8_1_9:34251701-34251866:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.8226318359375	2	535.823169	1069.63179	-1.2875	-0.00068988	-0.56516	-0.00030282	-1.8527	-0.0009927	535.8227210887089	51.077	1.5601	51.077	50.101	51.661	0					63	40	2	0	0	0	0.67345	1	4105	4105		42.396	8.4745	1	293180			15720	9765	10744	10753	18187	18187	126				0.09975539393280997
ICILRSVLP	9	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))ILRSVLP_					0	1	0		ENST00000297661.8_1_9:34251701-34251866:+|nuORF	ENST00000297661.8_1_9:34251701-34251866:+|nuORF	ENST00000297661.8_1_9:34251701-34251866:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	535.823169	1069.63179	0.011811	6.3284E-06	-1.6551	-0.00088683	-1.6433	-0.0008805	535.822094739274	50.903	1.5324	50.901	49.95	51.482	-0.0020447	-0.10253	-0.00026997	NaN	42.396	75	42	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199320			15721	9765	10744	10753			126				0.09975539393280997
ICILRSVLP	9	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))ILRSVLP_					0	1	0		ENST00000297661.8_1_9:34251701-34251866:+|nuORF	ENST00000297661.8_1_9:34251701-34251866:+|nuORF	ENST00000297661.8_1_9:34251701-34251866:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	535.823169	1069.63179	0.0092352	4.9484E-06	-1.6438	-0.00088078	-1.6346	-0.00087583	535.8220639150398	50.999	1.5379	50.976	49.988	51.526	-0.02343	-0.028241	-0.00025786	NaN	42.396	72	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	246980			15722	9765	10744	10753			126				0.09975539393280997
ICKASAFGK	9	Unmodified	_ICKASAFGK_					0	0	0		ENSG00000143631|ENST00000368799|FLG;CON__P20930	ENSG00000143631|ENST00000368799|FLG	ENSG00000143631|ENST00000368799|FLG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	462.7496643066406	2	462.752213	923.489873	-0.7843	-0.00036294	-3.1232	-0.0014453	-3.9075	-0.0018082	462.75053665918585	47.326	0.48594	47.299	47.027	47.513	-0.026737					23	14	2	0	0	0	0.6204	1	3937	3937		45.972	0.020292	1	200280		+	15723	595	10745	10754	18188	18188					0.02506746370977453
ICKKRKKKG	9	Unmodified	_ICKKRKKKG_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|13|1|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|13|1|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.7264404296875	2	544.857878	1087.7012	0.44659	0.00024333	-3.8452	-0.0020951	-3.3987	-0.0018518	544.8557299545986	24.228	0.49653	24.283	24.045	24.541	0.055485					15	11	2	0	0	0	0.20789	1	854	854		16.473	9.7376	1	18952	+		15724	29549	10746	10755	18189	18189					0.16086043132713712
ICKRKLAP	8	Unmodified	_ICKRKLAP_					0	0	0			REV__nc|ENSG00000049246|P56645|PER3	REV__nc|ENSG00000049246|P56645|PER3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7903747558594	2	464.791672	927.568792	0.19154	8.9025E-05	-2.3678	-0.0011005	-2.1763	-0.0010115	464.7904622046614	36.811	0.86831	36.91	36.514	37.382	0.099277					56	23	3	0	0	0	0.81548	1	2052	2052		20.482	1.1219	1	232950	+		15725	16370	10747	10756	18190	18190					0.10211018395909832
ICLESYILFV	10	Unmodified	_ICLESYILFV_					0	0	0		ENST00000304916.3_1_8:127564985-127565123:-|nuORF	ENST00000304916.3_1_8:127564985-127565123:-|nuORF	ENST00000304916.3_1_8:127564985-127565123:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	600.3240966796875	2	600.322668	1198.63078	-0.31424	-0.00018865	2.3536	0.0014129	2.0394	0.0012243	600.3239232802032	111.52	1.0307	111.55	111.06	112.09	0.030388					113	40	4	0	0	0	0.85694	1	12234	12234		21.96	3.6978	1	160730			15726	9843	10748	10757	18191	18191					0.03941280233698308
ICLGLSVLSQ	10	Unmodified	_ICLGLSVLSQ_					0	0	0			REV__ENSG00000196263|ENST00000308031|ZNF471	REV__ENSG00000196263|ENST00000308031|ZNF471	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7933349609375	2	516.791535	1031.56852	0.82179	0.0004247	2.9641	0.0015318	3.7859	0.0019565	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.86763	1	9081	9081		26.693	2.1737	1	858640	+		15727	23108	10749	10758	18192	18192					0.05399553885399655
ICLLPFFL	8	Unmodified	_ICLLPFFL_					0	0	0			REV__ENST00000532529.1_1_11:101827229-101827448:+|nuORF	REV__ENST00000532529.1_1_11:101827229-101827448:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.2373962402344	2	483.280075	964.545597	0.20735	0.00010021	-2.818	-0.0013619	-2.6107	-0.0012617	483.27901886194104	40.011	0.15505	39.98	39.931	40.086	-0.030991					5	3	2	0	0	0	0.4196	1	2818	2818		33.493	0	1	19168	+		15728	28328	10750	10759	18193	18193					0.06190579558574427
ICLRKKRFA	9	Unmodified	_ICLRKKRFA_					0	0	0			REV__nc|ENSG00000196814|Q9H7P6-2|MVB12B	REV__nc|ENSG00000196814|Q9H7P6-2|MVB12B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.8487548828125	2	567.850053	1133.68555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.18	1	111.12	110.62	111.62	-0.059937								0	0	0	0.31472	1	12094	12094		25.45	2.4077	1		+		15729	23176	10751	10760	18194	18194					0.1240575661568073
ICLSLLHK	8	Unmodified	_ICLSLLHK_					0	0	0			REV__ENSG00000125863|ENST00000347364|MKKS	REV__ENSG00000125863|ENST00000347364|MKKS	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.7790222167969	2	463.778231	925.541908	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.179	1	41.148	40.648	41.648	-0.030991								0	0	0	0.29264	1	2987	2987		29.15	1.2673	1		+		15730	15769	10752	10761	18195	18195					0.07615909784726682
ICNRKEDYPLL	11	Carbamidomethyl (C)	_IC(Carbamidomethyl (C))NRKEDYPLL_	IC(1)NRKEDYPLL		IC(45)NRKEDYPLL		0	1	0		nc|ENSG00000143199|Q96PN6-4|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;ENSG00000143199|ENST00000367851|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	474.58123779296875	3	474.246621	1419.71803	0.99317	0.00047101	1.6076	0.00076238	2.6007	0.0012334	474.24733219694247	17.591	0.36703	17.666	17.534	17.902	0.075441					40	13	4	0	0	0	0.59499	1	205	205		45.022	21.644	1	322140			15731	4611	10753	10762	18196	18196	61				0.024964544373688113
ICNRVLVPL	9	Unmodified	_ICNRVLVPL_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8086547851562	2	513.810062	1025.60557	-0.38907	-0.00019991	-1.6263	-0.0008356	-2.0153	-0.0010355	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.7932	2	3684	3684;3691		20.482	1.1219	1	1358900	+		15732	16914	10754	10763	18197;18198	18197					0.09379270221802471
ICQQNVNG	8	Unmodified	_ICQQNVNG_					0	0	0			REV__ENST00000508914.1_1_4:120473609-120484125:-|nuORF	REV__ENST00000508914.1_1_4:120473609-120484125:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26220703125	2	438.205627	874.396701	-2.5654	-0.0011242	2.1461	0.00094044	-0.41932	-0.00018375	438.20602648887836	40.992	0.60064	41.384	41.237	41.838	0.39209					20	16	2	0	0	0	0.4196	1	3553	3553		40.573	3.5441	1	400410	+		15733	19499	10755	10764	18199	18199					-0.045521780822582514
ICTGRHVL	8	Unmodified	_ICTGRHVL_					0	0	0			REV__ENST00000523028.5_1_16:21892164-21910369:-|nuORF	REV__ENST00000523028.5_1_16:21892164-21910369:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.7535095214844	2	449.750005	897.485456	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.793	1	25.362	24.862	25.862	-0.4311								0	0	0	0.29452	1	1371	1371		33.516	5.6333	1		+		15734	24874	10756	10765	18200	18200					0.03261281948061878
ICTLVHTAM	9	Unmodified	_ICTLVHTAM_					0	0	0		nc|ENSG00000116147|Q92752-2|TNR;ENSG00000116147|ENST00000367674|TNR	nc|ENSG00000116147|Q92752-2|TNR	nc|ENSG00000116147|Q92752-2|TNR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.30084228515625	2	494.751356	987.488158	-0.074234	-3.6727E-05	3.2746	0.0016201	3.2003	0.0015834	494.75071664127785	97.38	0.50537	97.442	97.256	97.762	0.062233					18	11	2	0	0	0	0.20789	1	10305	10305		25.45	0	1	76074			15735	2903	10757	10766	18201	18201					-0.006086307092914467
ICTPLFGALGR	11	Unmodified	_ICTPLFGALGR_					0	0	0			REV__ENST00000523352.1_1_8:95884148-95885795:+|nuORF	REV__ENST00000523352.1_1_8:95884148-95885795:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3193359375	2	574.318251	1146.62195	0.81882	0.00047026	1.348	0.00077417	2.1668	0.0012444	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.7144	1	9713	9713		29.17	1.0886	1	1866200	+		15736	28138	10758	10767	18202	18202					0.05450351387912633
ICVFLRHIL	9	Unmodified	_ICVFLRHIL_					0	0	0			REV__nc|ENSG00000159733|Q9HCC9-5|ZFYVE28	REV__nc|ENSG00000159733|Q9HCC9-5|ZFYVE28	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	557.2770385742188	2	557.333704	1112.65286	1.8539	0.0010332	-2.4473	-0.001364	-0.59343	-0.00033074	557.3341275452169	100.52	0.96413	100.82	100.45	101.41	0.2999					51	23	4	0	0	0	0.20789	1	12246	12246		17.365	0	1	218940	+		15737	20678	10759	10768	18203	18203					0.10103549492828279
ICVNNAEAQ	9	Unmodified	_ICVNNAEAQ_					0	0	0			REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A	REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.22271728515625	2	481.224017	960.43348	-3.0189	-0.0014528	0.11705	5.6328E-05	-2.9018	-0.0013964	481.2239030858985	38.532	0.44539	38.543	38.317	38.762	0.011173					20	9	3	0	0	0	0.31972	1	2644	2644		63.306	9.9548	1	100320	+		15738	21937	10760	10769	18204	18204					-0.0483192625636093
ICVNNAEAQ	9	Unmodified	_ICVNNAEAQ_					0	0	0			REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A	REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	481.224017	960.43348	0.11813	5.6845E-05	-3.6664	-0.0017644	-3.5483	-0.0017075	481.2221653228368	38.623	0.432	38.595	38.377	38.809	-0.027843	0.074914	-0.0021811	NaN	63.306	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85440	+		15739	21937	10760	10769							-0.0483192625636093
ICVNNAEAQ	9	Unmodified	_ICVNNAEAQ_					0	0	0			REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A	REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	481.224017	960.43348	0.22214	0.0001069	-2.3028	-0.0011082	-2.0806	-0.0010013	481.22290242460497	38.431	0.36649	38.526	38.323	38.69	0.094322	0.0054535	-0.00086866	NaN	63.306	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66360	+		15740	21937	10760	10769							-0.0483192625636093
ICVNNAEAQ	9	Unmodified	_ICVNNAEAQ_					0	0	0			REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A	REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	481.224017	960.43348	0.082676	3.9786E-05	-2.1829	-0.0010505	-2.1002	-0.0010107	481.22319359585146	38.475	0.41681	38.417	38.288	38.705	-0.057915	-0.10315	-0.00075327	NaN	63.306	13	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48879	+		15741	21937	10760	10769							-0.0483192625636093
ICVSLPPVLS	10	Unmodified	_ICVSLPPVLS_					0	0	0		ENST00000376514.6_2_19:54969867-54970041:+|nuORF	ENST00000376514.6_2_19:54969867-54970041:+|nuORF	ENST00000376514.6_2_19:54969867-54970041:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	514.298095703125	2	514.296453	1026.57835	-0.29362	-0.00015101	2.9026	0.0014928	2.609	0.0013418	514.298462804293	96.228	2.3462	96.459	94.984	97.33	0.23103					132	55	3	0	0	0	0.84112	1	9932	9932		37.159	1.5408	1	616300			15742	10818	10761	10770	18205	18205					0.06612741890762663
IDAISLLT	8	Unmodified	_IDAISLLT_					0	0	0			REV__ENSG00000179528|ENST00000377566|LBX2	REV__ENSG00000179528|ENST00000377566|LBX2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.74859619140625	2	423.252569	844.490584	-1.2738	-0.00053913	-4.3228	-0.0018297	-5.5966	-0.0023688	423.25067684644813	39.153	1.0766	39.106	38.285	39.361	-0.047005					31	24	2	0	0	0	0.4196	1	2799	2799		33.516	1.5607	1	117510	+		15743	22340	10762	10771	18206	18206					0.062118642916516364
IDALRTVG	8	Unmodified	_IDALRTVG_					0	0	0			REV__nc|ENSG00000125485|Q9H8H2-4|DDX31	REV__nc|ENSG00000125485|Q9H8H2-4|DDX31	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.74859619140625	2	422.747985	843.481417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.2	1	39.153	38.653	39.653	-0.047001								0	0	0	0.13582	1	2799	2799		76.847	5.5509	1		+		15744	18647	10763	10772	18207	18207					0.053415157259905754
IDAYCLDLLF	10	Unmodified	_IDAYCLDLLF_					0	0	0		nc|ENSG00000156510|Q2TB90-2|HKDC1	nc|ENSG00000156510|Q2TB90-2|HKDC1	nc|ENSG00000156510|Q2TB90-2|HKDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	593.296142578125	2	593.29665	1184.57875	-1.5115	-0.00089679	-1.8066	-0.0010718	-3.3181	-0.0019686	593.2954723395594	90.054	1.2825	90.525	89.803	91.086	0.47068					51	32	2	0	0	0	0.4892	3	10682	10682;10693;10705		56.721	5.3856	1	1035700			15745	15015	10764	10773	18208;18209;18210	18208					-0.0061588318003487075
IDFEQAKH	8	Unmodified	_IDFEQAKH_					0	0	0			REV__ENSG00000013375|ENST00000513973|PGM3	REV__ENSG00000013375|ENST00000513973|PGM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.2483215332031	2	494.248349	986.482145	-2.4989	-0.0012351	2.4347	0.0012033	-0.06425	-3.1755E-05	494.249462831107	60.499	0.80064	60.53	60.177	60.977	0.0312					55	23	3	0	0	0	0.84634	1	5652	5652		60.294	6.9425	1	1066900	+		15746	16195	10765	10774	18211	18211					-0.011636896249569872
IDGAVISGNPG	11	Unmodified	_IDGAVISGNPG_					0	0	0		ENSG00000197565|ENST00000334504|COL4A6;nc|ENSG00000197565|Q14031|COL4A6	ENSG00000197565|ENST00000334504|COL4A6	ENSG00000197565|ENST00000334504|COL4A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.25732421875	2	500.258914	998.503274	-0.60497	-0.00030264	-3.248	-0.0016249	-3.853	-0.0019275	500.2570143399608	52.837	0.70274	53.261	52.97	53.673	0.42348					40	16	3	0	0	0	0.43778	1	5304	5304		56.434	0.92959	1	1020700			15747	8176	10766	10775	18212	18212					0.003962756839200665
IDGHKEKMR	9	Unmodified	_IDGHKEKMR_					0	0	0			REV__ENSG00000124212|ENST00000244043|PTGIS	REV__ENSG00000124212|ENST00000244043|PTGIS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.7568969726562	2	557.295307	1112.57606	-0.50489	-0.00028138	-3.2556	-0.0018143	-3.7605	-0.0020957	557.2936582969613	38.814	0.37865	39.156	39.022	39.401	0.34187					10	8	2	0	0	0	0.20789	1	3248	3248		40.778	16.575	1	41300	+		15748	18571	10767	10776	18213	18213					0.024277062056853538
IDGLKPLL	8	Unmodified	_IDGLKPLL_					0	0	0		nc|ENSG00000116688|O95140-2|MFN2;ENSG00000116688|ENST00000235329|MFN2	nc|ENSG00000116688|O95140-2|MFN2	nc|ENSG00000116688|O95140-2|MFN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3001708984375	2	434.778754	867.542954	-1.3784	-0.00059932	4.0562	0.0017636	2.6778	0.0011643	434.7806453534285	75.172	1.4354	75.26	74.724	76.16	0.087639					60	36	2	0	0	0	0.4196	1	6987	6987		31.955	0	1	91599			15749	2933	10768	10777	18214	18214					0.10388447425293634
IDGLSYVC	8	Unmodified	_IDGLSYVC_					0	0	0			REV__nc|ENSG00000138623|O75326-2|SEMA7A	REV__nc|ENSG00000138623|O75326-2|SEMA7A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25164794921875	2	435.207304	868.400055	-0.31328	-0.00013634	-1.6009	-0.00069674	-1.9142	-0.00083308	435.2065109733799	92.51	0.92305	92.972	92.53	93.453	0.46249					29	21	2	0	0	0	0.4196	1	11070	11070		42.474	26.001	1	71416	+		15750	19483	10769	10778	18215	18215					-0.03940928028259805
IDGPNLRL	8	Unmodified	_IDGPNLRL_					0	0	0			REV__nc|ENSG00000141968|P15498-2|VAV1	REV__nc|ENSG00000141968|P15498-2|VAV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.26007080078125	2	449.261259	896.507966	-1.1655	-0.00052364	-0.32901	-0.00014781	-1.4946	-0.00067145	449.26086608568033	70.705	0.68031	70.776	70.454	71.134	0.071037					61	34	2	0	0	0	0.89962	1	6397	6397		38.806	3.1879	1	315510	+		15751	19717	10770	10779	18216	18216					0.055572046173210765
IDGTDKEIY	9	Unmodified	_IDGTDKEIY_					0	0	0			REV__nc|ENSG00000134765|Q08554-2|DSC1	REV__nc|ENSG00000134765|Q08554-2|DSC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.2578125	2	527.258579	1052.50261	-1.7044	-0.00089867	-0.67519	-0.000356	-2.3796	-0.0012547	527.258067551962	25.531	0.60729	25.531	25.33	25.938	0					55	28	3	0	0	0	0.67345	1	927	927		42.396	3.1433	1	154210	+		15752	19165	10771	10780	18217	18217					-0.021545637557892405
IDGVYDNAEY	10	Unmodified	_IDGVYDNAEY_					0	0	0		nc|ENSG00000156535|Q6YHK3-2|CD109;nc|ENSG00000156535|Q6YHK3-4|CD109;ENSG00000156535|ENST00000287097|CD109	nc|ENSG00000156535|Q6YHK3-2|CD109	nc|ENSG00000156535|Q6YHK3-2|CD109	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.7547607421875	2	579.751118	1157.48768	0.37514	0.00021749	3.6001	0.0020872	3.9752	0.0023046	579.7531276961427	78.292	0.83783	78.239	77.877	78.715	-0.053558					78	25	4	0	0	0	0.86218	1	7829	7829		32.812	0.85756	1	568320			15753	5381	10772	10781	18218	18218					-0.08476055623805223
IDHAKHTVESH	11	Unmodified	_IDHAKHTVESH_					0	0	0			REV__ENST00000492179.1_1_5:132086778-132086856:+|nuORF	REV__ENST00000492179.1_1_5:132086778-132086856:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	637.318359375	2	637.317825	1272.6211	-0.81475	-0.00051926	-0.58931	-0.00037558	-1.4041	-0.00089483	637.3173989215269	46.688	0.49515	46.688	46.381	46.876	0					21	11	3	0	0	0	0.61369	1	3532	3532		42.864	4.1107	1	189020	+		15754	27668	10773	10782	18219	18219					-0.004307717274286915
IDHAKHTVESH	11	Unmodified	_IDHAKHTVESH_					0	0	0			REV__ENST00000492179.1_1_5:132086778-132086856:+|nuORF	REV__ENST00000492179.1_1_5:132086778-132086856:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	637.3196411132812	2	637.317825	1272.6211	0.57499	0.00036645	-1.8488	-0.0011783	-1.2738	-0.00081184	637.3164436433204	46.873	0.55861	46.869	46.637	47.195	-0.0041618					25	13	3	0	0	0	0.32318	1	3823	3823		69.628	9.5094	1	140870	+		15755	27668	10773	10782	18220	18220					-0.004307717274286915
IDHAKHTVESH	11	Unmodified	_IDHAKHTVESH_					0	0	0			REV__ENST00000492179.1_1_5:132086778-132086856:+|nuORF	REV__ENST00000492179.1_1_5:132086778-132086856:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	637.317825	1272.6211	-0.81475	-0.00051926	-0.58931	-0.00037558	-1.4041	-0.00089483	637.3173989215269	46.688	0.49515	46.688	46.381	46.876	0	-0.14942	0.00056102	NaN	69.628	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189020	+		15756	27668	10773	10782							-0.004307717274286915
IDHAKHTVESH	11	Unmodified	_IDHAKHTVESH_					0	0	0			REV__ENST00000492179.1_1_5:132086778-132086856:+|nuORF	REV__ENST00000492179.1_1_5:132086778-132086856:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	637.317825	1272.6211	0.14146	9.0157E-05	-1.1454	-0.00073	-1.004	-0.00063985	637.3169283504219	46.882	0.42863	46.868	46.719	47.147	-0.013821	0.030349	-0.00014783	NaN	69.628	20	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101490	+		15757	27668	10773	10782							-0.004307717274286915
IDHAKHTVESH	11	Unmodified	_IDHAKHTVESH_					0	0	0			REV__ENST00000492179.1_1_5:132086778-132086856:+|nuORF	REV__ENST00000492179.1_1_5:132086778-132086856:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	637.317825	1272.6211	0.4504	0.00028705	-1.9534	-0.0012449	-1.503	-0.00095787	637.3169286383265	46.929	0.38691	46.967	46.686	47.073	0.038181	0.12986	-0.0011776	NaN	69.628	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136700	+		15758	27668	10773	10782							-0.004307717274286915
IDHIFASK	8	Unmodified	_IDHIFASK_					0	0	0		nc|ENSG00000152332|Q8TAS1-2|UHMK1;nc|ENSG00000152332|Q8TAS1-3|UHMK1;ENSG00000152332|ENST00000489294|UHMK1	nc|ENSG00000152332|Q8TAS1-2|UHMK1	nc|ENSG00000152332|Q8TAS1-2|UHMK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7538146972656	2	465.75581	929.497067	-0.26338	-0.00012267	0.33984	0.00015828	0.07646	3.5612E-05	465.75580457918437	53.259	0.66117	53.673	53.332	53.994	0.4139					32	15	3	0	0	0	0.93259	1	5372	5372		51.193	1.7511	1	559870			15759	5169	10774	10783	18221	18221					0.02949802243040267
IDILGLLLLL	10	Unmodified	_IDILGLLLLL_					0	0	0			REV__ENSG00000173369|ENST00000509305|C1QB	REV__ENSG00000173369|ENST00000509305|C1QB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.875732421875	2	548.373018	1094.73148	-1.4258	-0.00078185	3.8141	0.0020915	2.3883	0.0013097	548.3749403834641	37.356	2.5025	37.356	35.98	38.483	0					111	59	3	0	0	0	0.88541	1	2067	2067		11.511	0	1	203100	+		15760	21917	10775	10784	18222	18222					0.18790680278902983
IDIYTGLFN	9	Unmodified	_IDIYTGLFN_					0	0	0		ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3107299804688	2	528.274032	1054.53351	0.34547	0.0001825	-0.80056	-0.00042292	-0.45509	-0.00024041	528.2732134713042	80.279	0.50651	80.695	80.506	81.013	0.41621					19	11	2	0	0	0	0.20789	1	9202	9202		23.042	10.836	1	183310			15761	2738	10776	10785	18223	18223					0.008426343491009902
IDKAKKKLI	9	Unmodified	_IDKAKKKLI_					0	0	0			REV__nc|ENSG00000232535|P0DN80|OR5H8	REV__nc|ENSG00000232535|P0DN80|OR5H8	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.8633422851562	2	528.860609	1055.70667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.8	1	114.73	114.23	115.23	-0.07								0	0	0	0.35896	1	12402	12402		12.207	0.69583	1		+		15762	30220	10777	10786	18224	18224					0.1810404519619624
IDKGRHGT	8	Unmodified	_IDKGRHGT_					0	0	0			REV__nc|ENSG00000048649|Q96T23-3|RSF1	REV__nc|ENSG00000048649|Q96T23-3|RSF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24200439453125	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.87922	1	7230	7230		31.955	1.4512	1	716910	+		15763	16367	10778	10787	18225	18225					0.021228632976999506
IDLCQPTQK	9	Unmodified	_IDLCQPTQK_					0	0	0		ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.2676391601562	2	523.270967	1044.52738	-0.36284	-0.00018986	-2.3532	-0.0012314	-2.716	-0.0014212	523.2696472001946	69.909	0.5953	69.871	69.588	70.183	-0.037865					46	30	2	0	0	0	0.66686	1	6776	6776		42.864	0.38981	1	1386100			15764	1276	10779	10788	18226	18226					0.006897928459011382
IDLKKTVAM	9	Unmodified	_IDLKKTVAM_					0	0	0		ENSG00000137218|ENST00000373018|FRS3	ENSG00000137218|ENST00000373018|FRS3	ENSG00000137218|ENST00000373018|FRS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8041076660156	2	509.801903	1017.58925	-0.073627	-3.7535E-05	3.6181	0.0018445	3.5444	0.001807	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.78983	1	10051	10051		27.882	3.3631	1	3087300			15765	4182	10780	10789	18227	18227					0.08116144265056846
IDLKLILRKL	10	Unmodified	_IDLKLILRKL_					0	0	0			REV__ENSG00000121440|ENST00000263666|PDZRN3	REV__ENSG00000121440|ENST00000263666|PDZRN3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	612.8796997070312	2	612.923741	1223.83293	-0.12436	-7.6226E-05	-1.8932	-0.0011604	-2.0176	-0.0012366	612.9217756022814	105.08	0.42783	105.08	104.99	105.42	0					13	9	2	0	0	0	0.37624	1	10832	10832		14.865	0	1	72833	+		15766	18455	10781	10790	18228	18228					0.22996551701453427
IDLLQNLCEKD	11	Unmodified	_IDLLQNLCEKD_					0	0	0		ENST00000583601.1_1_17:30367683-30367950:+|nuORF	ENST00000583601.1_1_17:30367683-30367950:+|nuORF	ENST00000583601.1_1_17:30367683-30367950:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002624511719	3	435.223594	1302.64895	-0.97033	-0.00042231	1.6848	0.00073326	0.71447	0.00031095	435.2244044042865	71.782	0.16743	72.166	72.082	72.25	0.38449					5	3	2	0	0	0	0.17244	1	7991	7991		19.627	0	1	32058			15767	14124	10782	10791	18229	18229					0.009733704177506297
IDLPFCYLK	9	Unmodified	_IDLPFCYLK_					0	0	0			REV__ENSG00000196639|ENST00000431010|HRH1	REV__ENSG00000196639|ENST00000431010|HRH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	556.2974243164062	2	556.296453	1110.57835	0.56899	0.00031653	2.5022	0.001392	3.0712	0.0017085	556.2977506736099	68.73	0.66137	68.859	68.573	69.235	0.12839					33	25	2	0	0	0	0.62081	1	6214	6214		45.952	3.5558	1	114330	+		15768	23155	10783	10792	18230	18230					0.027487418907412575
IDLRPKAKAEL	11	Unmodified	_IDLRPKAKAEL_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3823852539062	2	627.382437	1252.75032	-0.21854	-0.00013711	0.33099	0.00020765	0.11244	7.0546E-05	627.3824987700403	117.62	0.3381	117.55	117.34	117.68	-0.07531					36	11	4	0	0	0	0.77061	1	12625	12625		17.468	0.99486	1	1514200	+		15769	16368	10784	10793	18231	18231					0.1340560990265658
IDLRQASRIKL	11	Unmodified	_IDLRQASRIKL_					0	0	0			REV__ENST00000398334.5_2_X:14883631-14883670:-|nuORF	REV__ENST00000398334.5_2_X:14883631-14883670:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2730407714844	3	438.273499	1311.79867	-0.15875	-6.9576E-05	-0.97566	-0.00042761	-1.1344	-0.00049718	438.2729904466262	106.56	0.95083	106.53	106.1	107.05	-0.025146					93	21	6	0	0	0	0.72892	1	11539	11539		26.75	3.3718	1	4356100	+		15770	26198	10785	10794	18232	18232					0.15524103542543344
IDLTLLVEP	9	Unmodified	_IDLTLLVEP_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.253662109375	2	506.799883	1011.58521	-1.5701	-0.00079573	2.8231	0.0014308	1.253	0.00063503	506.8011456633562	42.377	2.9381	42.81	41.527	44.465	0.4334					147	74	3	0	0	0	0.20789	1	3897	3897		23.042	0	1	1096400	+		15771	23196	10786	10795	18233	18233					0.07988378043000921
IDLVEDETVQI	11	Unmodified	_IDLVEDETVQI_					0	0	0			REV__ENST00000565642.5_1_16:71777395-71799448:-|nuORF	REV__ENST00000565642.5_1_16:71777395-71799448:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	637.2744750976562	2	637.329733	1272.64491	-0.33841	-0.00021568	-0.28356	-0.00018072	-0.62197	-0.0003964	637.8315125541217	83.143	0.4098	83.574	83.334	83.744	0.43108					15	9	2	0	0	0	0.16822	1	9651	9651		52.937	0	1	121790	+		15772	21314	10787	10796	18234	18234					0.019496041957154375
IDLVVLTTN	9	Unmodified	_IDLVVLTTN_					0	0	0			REV__ENST00000536374.1_1_9:80851502-80863830:+|nuORF	REV__ENST00000536374.1_1_9:80851502-80863830:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.3009948730469	2	494.289682	986.564812	0.77463	0.00038289	-4.2391	-0.0020953	-3.4644	-0.0017124	494.28751639959	97.06	0.40694	97.451	97.115	97.522	0.39065					11	9	2	0	0	0	0.20789	1	11670	11670		44.117	8.4985	1	210350	+		15773	20092	10788	10797	18235	18235					0.07099207383180328
IDNHSLDLTQL	11	Unmodified	_IDNHSLDLTQL_					0	0	0			REV__ENSG00000134061|ENST00000256447|CD180	REV__ENSG00000134061|ENST00000256447|CD180	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8225708007812	2	634.827692	1267.64083	-0.84268	-0.00053496	-4.2098	-0.0026725	-5.0525	-0.0032075	634.8250099372073	58.867	0.91354	59.259	58.814	59.728	0.39209					35	21	2	0	0	0	0.29858	1	6199	6199		74.165	4.5374	1	1301400	+		15774	19113	10789	10798	18236	18236					0.017715594926812628
IDPIWNLATN	10	Unmodified	_IDPIWNLATN_					0	0	0		ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.37451171875	2	578.803488	1155.59242	-1.6265	-0.00094145	1.4443	0.00083595	-0.18228	-0.0001055	578.8044340842799	46.384	0.57021	47.307	46.949	47.519	0.92315					26	13	3	0	0	0	0.37624	1	4391	4391		38.754	0	1	1002300			15775	7703	10790	10799	18237	18237					0.020851106434292888
IDPIWNLATN	10	Unmodified	_IDPIWNLATN_					0	0	0		ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	578.803488	1155.59242	-1.7201	-0.0009956	1.8552	0.0010738	0.13505	7.8169E-05	578.8042777679676	46.615	0.64941	47.087	46.695	47.344	0.47139	-0.10995	0.00025427	NaN	38.754	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1251000			15776	7703	10790	10799							0.020851106434292888
IDPKGHAPVE	10	Unmodified	_IDPKGHAPVE_					0	0	0		ENSG00000158966|ENST00000651257|CACHD1;nc|ENSG00000158966|Q5VU97-2|CACHD1	ENSG00000158966|ENST00000651257|CACHD1	ENSG00000158966|ENST00000651257|CACHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7822265625	2	531.782556	1061.55056	0.46378	0.00024663	-1.044	-0.00055518	-0.58021	-0.00030855	531.7820031077274	29.432	2.4582	29.343	28.288	30.746	-0.089544					170	57	5	0	0	0	0.64457	1	1916	1916		47.657	1.6851	1	12586000			15777	5505	10791	10800	18238	18238					0.022245549549097632
IDPPQLTR	8	Unmodified	_IDPPQLTR_					0	0	0			REV__ENSG00000266074|ENST00000675386|BAHCC1	REV__ENSG00000266074|ENST00000675386|BAHCC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.2654724121094	2	470.266542	938.51853	-0.9202	-0.00043274	-1.7597	-0.00082754	-2.6799	-0.0012603	470.2643975653443	61.332	2.1338	61.721	61.486	63.62	0.38945					72	51	3	0	0	0	0.92457	1	6552	6552		47.916	0.25827	1	294890	+		15778	23962	10792	10801	18239	18239					0.046811872717512415
IDPPQSGGVG	10	Unmodified	_IDPPQSGGVG_					0	0	0			REV__ENSG00000166825|ENST00000300060|ANPEP	REV__ENSG00000166825|ENST00000300060|ANPEP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.7421569824219	2	463.732532	925.45051	0.7682	0.00035624	-0.85987	-0.00039875	-0.09167	-4.2511E-05	463.73190495278834	50.623	0.45252	51.374	51.12	51.572	0.75174					15	10	2	0	0	0	0.37624	1	5017	5017		24.519	0	1	140310	+		15779	21326	10793	10802	18240	18240					-0.015196823788869551
IDQIRWRLLFL	11	Unmodified	_IDQIRWRLLFL_					0	0	0			REV__ENST00000410023.5_1_2:102781350-102781467:+|nuORF	REV__ENST00000410023.5_1_2:102781350-102781467:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.63360595703125	3	491.629394	1471.86635	4.626	0.0022743	3.3754	0.0016595	8.0015	0.0039337	491.6309760481291	107.86	0.19365	107.97	107.84	108.04	0.11715					10	5	2	0	0	0	0.79476	1	13191	13191		12.433	3.221	1	6517700	+		15780	26364	10794	10803	18241	18241					0.14929553473371016
IDRHIFGMK	9	Unmodified	_IDRHIFGMK_					0	0	0			REV__ENSG00000131023|ENST00000543571|LATS1	REV__ENSG00000131023|ENST00000543571|LATS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8035278320312	2	558.802768	1115.59098	0.49267	0.00027531	1.3314	0.00074401	1.8241	0.0010193	558.803379087328	49.48	0.75183	49.484	49.147	49.899	0.0035973					32	16	3	0	0	0	0.77244	1	4182	4182		32.812	6.1195	1	326250	+		15781	18930	10795	10804	18242	18242					0.03781198073693304
IDRPLLSVASA	11	Unmodified	_IDRPLLSVASA_					0	0	0			REV__nc|ENSG00000137054|Q9GZS1-1|POLR1E	REV__nc|ENSG00000137054|Q9GZS1-1|POLR1E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	571.3312377929688	2	571.332413	1140.65027	1.4665	0.00083786	-3.9942	-0.002282	-2.5277	-0.0014442	571.3301291539012	102.21	2.4124	102.26	101.34	103.75	0.043198					126	58	4	0	0	0	0.75906	1	11088	11088		20.03	0.033703	1	2089600	+		15782	29877	10796	10805	18243	18243					0.08557372568884603
IDSGSDPF	8	Unmodified	_IDSGSDPF_					0	0	0		ENSG00000188994|ENST00000369577|ZNF292;nc|ENSG00000188994|O60281-2|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.1838073730469	2	419.184883	836.355213	-1.7768	-0.00074482	-2.6033	-0.0010913	-4.3801	-0.0018361	419.184314181715	92.494	1.3307	92.72	92.238	93.569	0.22548					60	31	4	0	0	0	0.86791	1	9373	9373		28.254	0.37203	1	811100			15783	7979	10797	10806	18244	18244					-0.06951035569943542
IDSGVLLLRSK	11	Unmodified	_IDSGVLLLRSK_					0	0	0		ENST00000356956.5_2_6:160527199-160527481:+|nuORF	ENST00000356956.5_2_6:160527199-160527481:+|nuORF	ENST00000356956.5_2_6:160527199-160527481:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9153137207031	3	400.915201	1199.72377	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.86	1	113.88	113.38	114.38	0.020027								0	0	0	0.56276	1	13748	13748		23.378	0.79825	1				15784	10374	10798	10807	18245	18245					0.13189921011326078
IDSILGAR	8	Unmodified	_IDSILGAR_					0	0	0		nc|ENSG00000171763|Q9BVQ7-2|AFG2B;ENSG00000171763|ENST00000305560|SPATA5L1	nc|ENSG00000171763|Q9BVQ7-2|AFG2B	nc|ENSG00000171763|Q9BVQ7-2|AFG2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.7486267089844	2	422.747985	843.481417	-0.46233	-0.00019545	0.8606	0.00036382	0.39827	0.00016837	422.74833906023576	38.492	0.57734	39.015	38.75	39.328	0.52235					30	13	4	0	0	0	0.37302	1	3191	3191		87.754	8.3033	1	315520			15785	6706	10799	10808	18246	18246					0.05341515726001944
IDSLKIEI	8	Unmodified	_IDSLKIEI_					0	0	0			REV__ENSG00000169021|ENST00000304863|UQCRFS1	REV__ENSG00000169021|ENST00000304863|UQCRFS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.776611328125	2	465.778951	929.543348	-1.4399	-0.00067067	-1.5585	-0.00072594	-2.9984	-0.0013966	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.84341	1	7482	7482		24.203	0	1	287800	+		15786	21542	10800	10809	18247	18247					0.07575822354453976
IDSVKVGKR	9	Unmodified	_IDSVKVGKR_					0	0	0			REV__ENST00000464839.5_1_1:89591553-89613456:-|nuORF	REV__ENST00000464839.5_1_1:89591553-89613456:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904052734375	2	501.308741	1000.60293	-0.065016	-3.2593E-05	2.9692	0.0014885	2.9042	0.0014559	501.3103349087006	87.419	0.21529	87.487	87.401	87.616	0.067711					7	4	2	0	0	0	0.20789	1	8847	8847		14.865	0	1	71206	+		15787	27100	10801	10810	18248	18248					0.10265138088527692
IDTGLGLR	8	Unmodified	_IDTGLGLR_					0	0	0		nc|ENSG00000176055|Q68D91-2|MBLAC2;ENSG00000176055|ENST00000316610|MBLAC2	nc|ENSG00000176055|Q68D91-2|MBLAC2	nc|ENSG00000176055|Q68D91-2|MBLAC2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.7485046386719	2	422.747985	843.481417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.118	1	39.071	38.571	39.571	-0.047001								0	0	0	0.11947	1	2787	2787		73.975	2.679	1				15788	7053	10802	10811	18249	18249					0.05341515726001944
IDVEKTPFP	9	Unmodified	_IDVEKTPFP_					0	0	0		ENST00000466194.1_1_1:26801759-26802014:+|nuORF	ENST00000466194.1_1_1:26801759-26802014:+|nuORF	ENST00000466194.1_1_1:26801759-26802014:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.2835693359375	2	523.281857	1044.54916	0.9826	0.00051418	2.1139	0.0011062	3.0965	0.0016204	523.2827649916386	54.437	1.1745	54.844	54.319	55.493	0.40663					66	27	4	0	0	0	0.096326	1	5531	5531		93.143	10.838	1	3636900			15789	12127	10803	10812	18250	18250					0.02866920866131295
IDVEKTPFP	9	Unmodified	_IDVEKTPFP_					0	0	0		ENST00000466194.1_1_1:26801759-26802014:+|nuORF	ENST00000466194.1_1_1:26801759-26802014:+|nuORF	ENST00000466194.1_1_1:26801759-26802014:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2835693359375	2	523.281857	1044.54916	-0.29317	-0.00015341	3.4929	0.0018277	3.1997	0.0016743	523.2834819034339	54.227	1.0883	54.812	54.459	55.548	0.58474					69	25	4	0	0	0	0.059135	1	5521	5521		104.06	13.28	1	4336800			15790	12127	10803	10812	18251	18251					0.02866920866131295
IDVEVLLLLPS	11	Unmodified	_IDVEVLLLLPS_					0	0	0		ENST00000468386.2_1_2:70057024-70067283:+|nuORF	ENST00000468386.2_1_2:70057024-70067283:+|nuORF	ENST00000468386.2_1_2:70057024-70067283:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.86962890625	2	605.868297	1209.72204	1.0292	0.00062353	1.3589	0.00082331	2.388	0.0014468	605.8690285244107	50.522	0.77518	51.274	50.921	51.696	0.75174					42	18	3	0	0	0	0.58425	1	4990	4990		45.972	4.5456	1	1045600			15791	12176	10804	10813	18252	18252					0.1255686720273843
IDVEVLLLLPS	11	Unmodified	_IDVEVLLLLPS_					0	0	0		ENST00000468386.2_1_2:70057024-70067283:+|nuORF	ENST00000468386.2_1_2:70057024-70067283:+|nuORF	ENST00000468386.2_1_2:70057024-70067283:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	605.868297	1209.72204	0.79998	0.00048468	1.3006	0.00078802	2.1006	0.0012727	605.868964835272	50.651	0.82444	51.099	50.805	51.63	0.44761	-0.087412	-3.4263E-05	NaN	45.972	51	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1055400			15792	12176	10804	10813							0.1255686720273843
IDVGNRLH	8	Unmodified	_IDVGNRLH_					0	0	0			REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1	REV__nc|ENSG00000029534|P16157-14|ANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.25433349609375	2	462.256508	922.498464	-1.0307	-0.00047644	-0.95869	-0.00044316	-1.9894	-0.0009196	462.2559435428212	48.824	0.88636	49.283	48.779	49.665	0.45983					43	21	3	0	0	0	0.93786	1	4719	4719		53.351	3.3269	1	4622100	+		15793	29680;29681	10805	10814	18253	18253					0.03411436331805362
IDVGNRLH	8	Unmodified	_IDVGNRLH_					0	0	0			REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1	REV__nc|ENSG00000029534|P16157-14|ANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.25518798828125	2	462.256508	922.498464	-0.047188	-2.1813E-05	-1.8711	-0.00086493	-1.9183	-0.00088675	462.2554772123812	48.67	0.88339	49.575	49.21	50.093	0.90424					44	21	3	0	0	0	0.83456	3	4719	4719;4731;4744		60.972	14.206	1	4020800	+		15794	29680;29681	10805	10814	18254;18255;18256	18254					0.03411436331805362
IDVIGHDGKLP	11	Unmodified	_IDVIGHDGKLP_					0	0	0			REV__ENSG00000068745|ENST00000328631|IP6K2	REV__ENSG00000068745|ENST00000328631|IP6K2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3533935546875	2	582.324588	1162.63462	-0.28528	-0.00016612	-1.7238	-0.0010038	-2.0091	-0.0011699	582.3231361936606	104.25	0.30089	104.25	104.13	104.43	0					9	7	2	0	0	0	0.17347	1	10726	10726		29.17	10.067	1	34089	+		15795	16564	10806	10815	18257	18257					0.059810860518155096
IDVLVVGEP	9	Unmodified	_IDVLVVGEP_					0	0	0			REV__ENSG00000189233|ENST00000413272|NUGGC	REV__ENSG00000189233|ENST00000413272|NUGGC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76898193359375	2	470.771126	939.527698	-1.6346	-0.00076952	-2.724	-0.0012824	-4.3586	-0.0020519	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.74721	1	4137	4137		37.159	0.71236	1	1359900	+		15796	23072	10807	10816	18258	18258					0.0555153583743504
IDVPNRAR	8	Unmodified	_IDVPNRAR_					0	0	0		ENSG00000108510|ENST00000397786|MED13	ENSG00000108510|ENST00000397786|MED13	ENSG00000108510|ENST00000397786|MED13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7686462402344	2	470.769783	939.525013	-0.63024	-0.0002967	-1.6901	-0.00079565	-2.3203	-0.0010924	470.76900608470595	48.857	1.2932	49.317	48.985	50.278	0.45983					73	31	4	0	0	0	0.92457	1	4716	4716		47.916	1.9434	1	21584000			15797	2411	10808	10817	18259	18259					0.052831252231385406
IDVPRPTE	8	Unmodified	_IDVPRPTE_					0	0	0			REV__nc|ENSG00000132906|P55211-3|CASP9	REV__nc|ENSG00000132906|P55211-3|CASP9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.77960205078125	2	463.750724	925.486896	-0.71569	-0.0003319	3.2935	0.0015274	2.5778	0.0011955	463.7518399316705	38.409	0.24401	38.931	38.75	38.994	0.52235					7	5	2	0	0	0	0.4196	1	3165	3165		31.53	0	1	45572	+		15798	19041	10809	10818	18260	18260					0.02117194517813914
IDVTIPLTSLK	11	Unmodified	_IDVTIPLTSLK_					0	0	0			REV__nc|ENSG00000011007|Q14241-1|ELOA	REV__nc|ENSG00000011007|Q14241-1|ELOA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.58056640625	3	400.579706	1198.71729	2.7177	0.0010886	-0.50039	-0.00020045	2.2173	0.0008882	400.57942388573207	112.17	0.64908	112.15	112.05	112.69	-0.025414					36	14	3	0	0	0	0.72374	1	12415	12415		27.644	4.1212	1	3056300	+		15799	29673	10810	10819	18261	18261					0.1258798305993878
IDVTIPLTSLK	11	Unmodified	_IDVTIPLTSLK_					0	0	0			REV__nc|ENSG00000011007|Q14241-1|ELOA	REV__nc|ENSG00000011007|Q14241-1|ELOA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.58056640625	3	400.579706	1198.71729	-1.7912	-0.00071753	3.9801	0.0015944	2.1889	0.00087682	400.5810902225448	111.65	0.42501	111.76	111.55	111.97	0.11118					38	12	4	0	0	0	0.69687	1	12027	12027		32.034	1.4653	1	12328000	+		15800	29673	10810	10819	18262	18262					0.1258798305993878
IDVTIPLTSLK	11	Unmodified	_IDVTIPLTSLK_					0	0	0			REV__nc|ENSG00000011007|Q14241-1|ELOA	REV__nc|ENSG00000011007|Q14241-1|ELOA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.5799560546875	3	400.579706	1198.71729	0.73407	0.00029406	1.2981	0.00052	2.0322	0.00081405	400.5800545644303	111.89	0.61595	111.96	111.53	112.15	0.069542					52	18	4	0	0	0	0.73277	1	12050	12050		25.892	2.5138	1	4655100	+		15801	29673	10810	10819	18263	18263					0.1258798305993878
IDVTIPLTSLK	11	Unmodified	_IDVTIPLTSLK_					0	0	0			REV__nc|ENSG00000011007|Q14241-1|ELOA	REV__nc|ENSG00000011007|Q14241-1|ELOA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.580322265625	3	400.579706	1198.71729	-1.9294	-0.00077288	4.2661	0.0017089	2.3367	0.00093603	400.5812185024314	112.11	1.0204	112.09	111.8	112.82	-0.019882					97	31	4	0	0	0	0.69687	2	11928	11928;11971		32.034	8.6562	1	9176900	+		15802	29673	10810	10819	18264;18265	18264					0.1258798305993878
IDVTIPLTSLK	11	Unmodified	_IDVTIPLTSLK_					0	0	0			REV__nc|ENSG00000011007|Q14241-1|ELOA	REV__nc|ENSG00000011007|Q14241-1|ELOA	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	400.579706	1198.71729	0.73398	0.00029402	1.3712	0.00054928	2.1052	0.0008433	400.58019198099043	112.22	0.2012	112.29	112.11	112.31	0.066025	-0.01981	-0.00020907	NaN	32.034	17	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	433760	+		15803	29673	10810	10819							0.1258798305993878
IDVVALIGL	9	Unmodified	_IDVVALIGL_					0	0	0			REV__ENSG00000180919|ENST00000316529|OR56B4	REV__ENSG00000180919|ENST00000316529|OR56B4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7930908203125	2	456.791861	911.569169	-1.1724	-0.00053555	3.9802	0.0018181	2.8078	0.0012826	456.7935742947897	38.88	1.6337	38.833	37.942	39.576	-0.047001					120	37	4	0	0	0	0.7932	1	2770	2770		25.45	1.2474	1	2323700	+		15804	22427	10811	10820	18266	18266					0.10984716596760791
IDVVALIGL	9	Unmodified	_IDVVALIGL_					0	0	0			REV__ENSG00000180919|ENST00000316529|OR56B4	REV__ENSG00000180919|ENST00000316529|OR56B4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7929382324219	2	456.791861	911.569169	-1.4626	-0.0006681	4.253	0.0019428	2.7904	0.0012746	456.7937012430135	38.803	1.6993	38.814	37.946	39.646	0.011173					92	39	3	0	0	0	0.62081	4	2658	2658;2677;2695;2707		45.952	8.6178	1	2267400	+		15805	22427	10811	10820	18267;18268;18269;18270	18267					0.10984716596760791
IDVVALIGL	9	Unmodified	_IDVVALIGL_					0	0	0			REV__ENSG00000180919|ENST00000316529|OR56B4	REV__ENSG00000180919|ENST00000316529|OR56B4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79315185546875	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.67235	1	2348	2348		42.474	1.9018	1	1834900	+		15806	22427	10811	10820	18271	18271					0.10984716596760791
IDVVALIGL	9	Unmodified	_IDVVALIGL_					0	0	0			REV__ENSG00000180919|ENST00000316529|OR56B4	REV__ENSG00000180919|ENST00000316529|OR56B4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7930603027344	2	456.791861	911.569169	0.20144	9.2015E-05	2.7795	0.0012696	2.9809	0.0013616	456.79301419254114	38.74	1.332	38.834	38.396	39.728	0.094318					137	38	4	0	0	0	0.77546	2	2307	2307;2316		31.955	9.995	1	1693200	+		15807	22427	10811	10820	18272;18273	18272					0.10984716596760791
IDVVALIGL	9	Unmodified	_IDVVALIGL_					0	0	0			REV__ENSG00000180919|ENST00000316529|OR56B4	REV__ENSG00000180919|ENST00000316529|OR56B4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79302978515625	2	456.791861	911.569169	-0.0055701	-2.5444E-06	2.9863	0.0013641	2.9807	0.0013616	456.7931079883192	38.776	1.3461	38.723	38.257	39.603	-0.052731					134	39	4	0	0	0	0.76996	3	2323	2294;2323;2331		33.516	6.7195	1	1653300	+		15808	22427	10811	10820	18274;18275;18276	18275					0.10984716596760791
IEAAEERPW	9	Unmodified	_IEAAEERPW_					0	0	0		nc|ENSG00000127022|P27824-2|CANX;ENSG00000127022|ENST00000247461|CANX;nc|ENSG00000127022|P27824-3|CANX	nc|ENSG00000127022|P27824-2|CANX	nc|ENSG00000127022|P27824-2|CANX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.77099609375	2	550.772188	1099.52982	0.20093	0.00011067	-0.64019	-0.0003526	-0.43926	-0.00024193	550.7716334502886	66.287	1.0768	66.252	66.005	67.082	-0.035217					118	49	3	0	0	0	0.51307	1	6374	6374		51.335	1.8939	1	1422100			15809	3481	10812	10821	18277	18277					-0.015960354247681607
IEAAKSDVE	9	Unmodified	_IEAAKSDVE_					0	0	0			REV__ENSG00000155833|ENST00000374798|CYLC2	REV__ENSG00000155833|ENST00000374798|CYLC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.24542236328125	2	481.245472	960.476391	-0.28493	-0.00013712	0.39871	0.00019188	0.11378	5.4758E-05	481.2455876545853	21.634	0.56738	21.57	21.308	21.875	-0.064743					27	17	2	0	0	0	0.78124	1	636	636		30.318	2.0634	1	42453	+		15810	20447	10813	10822	18278	18278					-0.005428329272831434
IEAANILV	8	Unmodified	_IEAANILV_					0	0	0			REV__nc|ENSG00000164338|Q8TED0-2|UTP15	REV__nc|ENSG00000164338|Q8TED0-2|UTP15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.7515869140625	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.80706	1	7297	7297		19.36	0	1	423780	+		15811	21073	10814	10823	18279	18279					0.06383284011519663
IEAAVVLQ	8	Unmodified	_IEAAVVLQ_					0	0	0			REV__ENST00000419462.1_1_8:102381113-102381542:+|nuORF	REV__ENST00000419462.1_1_8:102381113-102381542:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.75262451171875	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.468	1	74.51	74.01	75.01	0.0429								0	0	0	0.30811	1	7125	7125		45.952	1.4209	1		+		15812	26474	10815	10824	18280	18280					0.06383284011531032
IEAEIPLVV	9	Unmodified	_IEAEIPLVV_					0	0	0		ENSG00000163541|ENST00000393868|SUCLG1	ENSG00000163541|ENST00000393868|SUCLG1	ENSG00000163541|ENST00000393868|SUCLG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7962951660156	2	491.794601	981.574648	-1.7512	-0.00086123	3.9452	0.0019402	2.194	0.001079	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.7932	1	3933	3933		19.36	1.995	1	2627300			15813	5822	10816	10825	18281	18281					0.08312395388577443
IEAGERRP	8	Unmodified	_IEAGERRP_					0	0	0			REV__ENST00000486433.5_1_12:56865273-56869736:-|nuORF	REV__ENST00000486433.5_1_12:56865273-56869736:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.25372314453125	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.90465	1	8051	8051		40.573	2.7611	1	1324500	+		15814	19219	10817	10826	18282	18282					0.027191324691784757
IEAGVLPL	8	Unmodified	_IEAGVLPL_					0	0	0		ENSG00000080200|ENST00000389622|CRYBG3	ENSG00000080200|ENST00000389622|CRYBG3	ENSG00000080200|ENST00000389622|CRYBG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2478942871094	2	406.249829	810.485105	-1.8094	-0.00073505	-0.74363	-0.0003021	-2.553	-0.0010372	406.2494235031066	90.628	2.0567	90.845	90.343	92.4	0.21736					110	49	3	0	0	0	0.86288	1	9122	9122		26.796	3.7594	1	1054100			15815	1436	10818	10827	18283	18283					0.07228185499855044
IEAKVTSK	8	Unmodified	_IEAKVTSK_					0	0	0			REV__ENSG00000178187|ENST00000519564|ZNF454	REV__ENSG00000178187|ENST00000519564|ZNF454	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.267333984375	2	438.263468	874.512382	-0.070932	-3.1087E-05	2.7081	0.0011869	2.6372	0.0011558	438.2649081827295	50.829	0.20668	51.264	51.202	51.409	0.43505					6	4	2	0	0	0	0.4196	1	5034	5034		35.618	6.4687	1	89517	+		15816	22263	10819	10828	18284	18284					0.07010669040244011
IEAQQRAVAI	10	Unmodified	_IEAQQRAVAI_					0	0	0		ENST00000461589.1_1_20:18448072-18449711:+|nuORF;ENST00000475192.1_1_20:18448105-18453554:+|nuORF;ENSG00000132664|ENST00000377603|POLR3F;ENST00000462997.5_1_20:18448220-18464199:+|nuORF	ENST00000461589.1_1_20:18448072-18449711:+|nuORF	ENST00000461589.1_1_20:18448072-18449711:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.80712890625	2	549.81693	1097.61931	-1.5687	-0.00086252	1.4196	0.0007805	-0.14917	-8.2018E-05	549.8177261980707	29.153	0.56392	29.123	28.822	29.386	-0.029207					20	12	2	0	0	0	0.37624	1	1843	1843		18.262	0	1	64382			15817	3815	10820	10829	18285	18285					0.07440219254613112
IEATKLEP	8	Unmodified	_IEATKLEP_					0	0	0			REV__ENSG00000187244|ENST00000270233|BCAM	REV__ENSG00000187244|ENST00000270233|BCAM	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.7537536621094	2	450.755475	899.496398	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.254	1	79.254	78.754	79.754	0								0	0	0	0.29245	1	7284	7284		30.504	0	1		+		15818	22908	10821	10830	18286	18286					0.042629628033296285
IEATLLWR	8	Unmodified	_IEATLLWR_					0	0	0		ENSG00000115602|ENST00000233954|IL1RL1	ENSG00000115602|ENST00000233954|IL1RL1	ENSG00000115602|ENST00000233954|IL1RL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29052734375	2	501.292559	1000.57057	-0.28392	-0.00014233	-3.9733	-0.0019918	-4.2572	-0.0021341	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.91977	1	10457	10457		45.952	0	1	9038000			15819	2860	10822	10831	18287	18287					0.07030350685511166
IEAVKGKVM	9	Unmodified	_IEAVKGKVM_					0	0	0			REV__nc|ENSG00000163590|Q5SGD2-4|PPM1L	REV__nc|ENSG00000163590|Q5SGD2-4|PPM1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7914733886719	2	487.788795	973.563038	-0.044786	-2.1846E-05	3.441	0.0016785	3.3962	0.0016566	487.79050086905886	81.837	2.594	82.336	81.05	83.644	0.49967					138	63	3	0	0	0	0.20789	1	9662	9662		24.203	0	1	641400	+		15820	20940	10823	10832	18288	18288					0.07519875093601058
IEAVSVVLV	9	Unmodified	_IEAVSVVLV_					0	0	0			REV__ENSG00000156886|ENST00000389202|ITGAD	REV__ENSG00000156886|ENST00000389202|ITGAD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.79107666015625	2	464.789318	927.564084	-1.1356	-0.00052781	3.8995	0.0018125	2.764	0.0012847	464.7910242247121	36.975	1.5496	36.999	36.145	37.695	0.023624					81	41	3	0	0	0	0.7932	1	2030	2030		25.45	0	1	297830	+		15821	20515	10824	10833	18289	18289					0.0974041273415196
IEDGGYKILI	10	Unmodified	_IEDGGYKILI_					0	0	0			REV__ENSG00000196924|ENST00000369850|FLNA	REV__ENSG00000196924|ENST00000369850|FLNA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3403930664062	2	560.816064	1119.61758	1.3904	0.00077975	4.0057	0.0022464	5.396	0.0030262	560.8187743786674	102.23	0.8632	102.28	101.93	102.79	0.043198					27	20	2	0	0	0	0.37624	1	11048	11048		21.96	2.8564	1	165480	+		15822	23181	10825	10834	18290	18290					0.06255165445986677
IEDIKGRWGSE	11	Unmodified	_IEDIKGRWGSE_					0	0	0		nc|ENSG00000024526|Q5TB30-2|DEPDC1;chr1:68481612-68483950|63|143.13|0.32|8.79|-|ENST00000370966|DEPDC1,DEPDC1;ENSG00000024526|ENST00000456315|DEPDC1;ENST00000421655.1_1_9:108520752-108520932:+|nuORF	nc|ENSG00000024526|Q5TB30-2|DEPDC1	nc|ENSG00000024526|Q5TB30-2|DEPDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	645.8251953125	2	645.327859	1288.64116	-0.11967	-7.7226E-05	-2.7966	-0.0018047	-2.9163	-0.001882	645.8277454077747	62.02	0.45327	61.986	61.746	62.2	-0.033173					31	13	3	0	0	0	0.7144	1	5880	5880		29.17	1.0886	1	165510			15823	55	10826	10835	18291	18291					0.008389792125399254
IEDIPKEVL	9	Unmodified	_IEDIPKEVL_					0	0	0		ENSG00000147419|ENST00000356537|CCDC25	ENSG00000147419|ENST00000356537|CCDC25	ENSG00000147419|ENST00000356537|CCDC25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.3031005859375	2	528.30279	1054.59103	-0.48442	-0.00025592	0.35616	0.00018816	-0.12826	-6.776E-05	528.3027239654247	58.167	1.0966	58.56	57.929	59.025	0.39342					42	26	2	0	0	0	0.2083	1	6075	6075		72.879	1.0018	1	1052300			15824	4901	10827	10836	18292	18292					0.06591476554672226
IEDKNITDL	9	Unmodified	_IEDKNITDL_					0	0	0			REV__nc|ENSG00000159593|Q13564-3|NAE1	REV__nc|ENSG00000159593|Q13564-3|NAE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7802124023438	2	530.779679	1059.5448	-0.016892	-8.9658E-06	0.035153	1.8658E-05	0.018261	9.6924E-06	530.7795643374689	72.106	0.78479	72.656	72.361	73.146	0.55009					41	18	3	0	0	0	0.66686	1	8110	8110		42.864	2.2917	1	589390	+		15825	20668	10828	10837	18293	18293					0.01741411652574243
IEDKVKALL	9	Unmodified	_IEDKVKALL_					0	0	0		nc|ENSG00000168918|Q92835-2|INPP5D;ENSG00000168918|ENST00000445964|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D	nc|ENSG00000168918|Q92835-2|INPP5D	nc|ENSG00000168918|Q92835-2|INPP5D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3204345703125	2	514.82115	1027.62775	-0.40063	-0.00020625	-4.4609	-0.0022966	-4.8615	-0.0025028	514.8204056640599	45.982	0.56299	46.454	46.132	46.695	0.47139					26	13	3	0	0	0	0.010555	2	4289	4289;4299		132.76	31.157	1	1566400			15826	6451	10829	10838	18294;18295	18294					0.11503773171239118
IEDLLVTPL	9	Unmodified	_IEDLLVTPL_					0	0	0			REV__ENSG00000164880|ENST00000404767|INTS1	REV__ENSG00000164880|ENST00000404767|INTS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8011779785156	2	506.799883	1011.58521	-0.49867	-0.00025273	2.7979	0.001418	2.2992	0.0011652	506.80125930962566	45.611	0.78478	45.623	45.395	46.179	0.012058					40	21	2	0	0	0	0.7932	1	3275	3275		24.203	2.5004	1	207840	+		15827	21124	10830	10839	18296	18296					0.07988378043000921
IEDNELNIVL	10	Unmodified	_IEDNELNIVL_					0	0	0		ENSG00000151414|ENST00000367385|NEK7;ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6	ENSG00000151414|ENST00000367385|NEK7	ENSG00000151414|ENST00000367385|NEK7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.3134765625	2	586.313886	1170.61322	-0.48604	-0.00028497	1.1546	0.00067697	0.66857	0.00039199	586.314229078803	85.369	0.81366	85.816	85.547	86.361	0.44736					46	19	4	0	0	0	0.21391	2	9992	9992;10016		82.75	2.2959	1	1112200			15828	3068	10831	10840	18297;18298	18297					0.03473656232426947
IEDQQSDII	9	Unmodified	_IEDQQSDII_					0	0	0			REV__ENSG00000111860|ENST00000368491|CEP85L	REV__ENSG00000111860|ENST00000368491|CEP85L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3336791992188	2	530.761486	1059.50842	0.63201	0.00033544	2.3754	0.0012607	3.0074	0.0015962	530.7629729192034	77.779	0.32437	78.185	78.059	78.384	0.40531					12	7	2	0	0	0	0.20789	1	8886	8886		32.812	1.2826	1	49961	+		15829	17901	10832	10841	18299	18299					-0.018954652441152575
IEDTNIKFDI	10	Unmodified	_IEDTNIKFDI_					0	0	0			REV__CON__P04258	REV__CON__P04258	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2469482421875	3	403.211683	1206.61322	-1.7905	-0.00072196	-0.16223	-6.5413E-05	-1.9528	-0.00078737	403.2113562399319	104.28	0.43255	104.45	104.14	104.57	0.17096					11	10	2	0	0	0	0.37624	1	11041	11041		28.577	8.9498	1	123790	+	+	15830	15978	10833	10842	18300	18300					0.01817656232447007
IEDVLAAA	8	Unmodified	_IEDVLAAA_					0	0	0		nc|ENSG00000179456|Q99592|ZBTB18;ENSG00000179456|ENST00000358704|ZBTB18	nc|ENSG00000179456|Q99592|ZBTB18	nc|ENSG00000179456|Q99592|ZBTB18	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.22906494140625	2	401.221268	800.427984	-0.17714	-7.1073E-05	1.6935	0.00067946	1.5163	0.00060839	401.22188296087916	42.552	0.56807	42.985	42.685	43.253	0.4334					22	13	2	0	0	0	0.4196	1	3759	3759		20.482	16.797	1	502080			15831	7271	10834	10843	18301	18301					0.019787182234608736
IEDVLAAA	8	Unmodified	_IEDVLAAA_					0	0	0		nc|ENSG00000179456|Q99592|ZBTB18;ENSG00000179456|ENST00000358704|ZBTB18	nc|ENSG00000179456|Q99592|ZBTB18	nc|ENSG00000179456|Q99592|ZBTB18	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	401.221268	800.427984	-1.95	-0.00078239	3.4862	0.0013987	1.5361	0.00061633	401.2225814030182	42.412	0.53043	43.11	42.85	43.381	0.69754	0.062191	0.00055943	NaN	13.775	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	465880			15832	7271	10834	10843							0.019787182234608736
IEEAAKLKVN	10	Unmodified	_IEEAAKLKVN_					0	0	0			REV__ENSG00000100714|ENST00000652337|MTHFD1	REV__ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.8302612304688	2	557.826963	1113.63937	3.0808	0.0017186	3.9281	0.0021912	7.0089	0.0039098	557.8291525228157	101	1.6416	100.95	100.53	102.17	-0.052116					75	38	3	0	0	0	0.86763	1	10997	10997		26.693	1.1189	1	714690	+		15833	17215	10835	10844	18302	18302					0.08709970194581729
IEEASGAFVYL	11	Unmodified	_IEEASGAFVYL_					0	0	0		nc|ENSG00000111679|P29350-2|PTPN6;ENST00000416215.6_1_12:7061038-7070080:+|nuORF;ENSG00000111679|ENST00000318974|PTPN6;nc|ENSG00000111679|P29350-3|PTPN6;nc|ENSG00000111679|P29350-4|PTPN6	nc|ENSG00000111679|P29350-2|PTPN6	nc|ENSG00000111679|P29350-2|PTPN6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	599.8026733398438	2	599.803154	1197.59175	0.092129	5.5259E-05	0.21934	0.00013156	0.31147	0.00018682	599.8030810786793	83.788	0.78956	84.223	83.876	84.666	0.43538					52	18	4	0	0	0	0.45916	2	9737	9725;9737		54.776	1.744	1	736900			15834	2602	10836	10845	18303;18304	18304					0.0008627120373603248
IEEASGAFVYL	11	Unmodified	_IEEASGAFVYL_					0	0	0		nc|ENSG00000111679|P29350-2|PTPN6;ENST00000416215.6_1_12:7061038-7070080:+|nuORF;ENSG00000111679|ENST00000318974|PTPN6;nc|ENSG00000111679|P29350-3|PTPN6;nc|ENSG00000111679|P29350-4|PTPN6	nc|ENSG00000111679|P29350-2|PTPN6	nc|ENSG00000111679|P29350-2|PTPN6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	599.8030395507812	2	599.803154	1197.59175	-0.10584	-6.3483E-05	0.4493	0.00026949	0.34346	0.00020601	599.8032733987533	83.802	0.78403	84.257	83.937	84.721	0.45556					54	18	4	0	0	0	0.29693	1	9769	9769		74.255	12.148	1	762660			15835	2602	10836	10845	18305	18305					0.0008627120373603248
IEEEDSTS	8	Unmodified	_IEEEDSTS_					0	0	0			REV__ENSG00000157502|ENST00000357175|PWWP3B	REV__ENSG00000157502|ENST00000357175|PWWP3B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.2652893066406	2	455.18782	908.361086	0.65959	0.00030024	0.77207	0.00035144	1.4317	0.00065168	455.1880843326598	25.182	1.1689	25.145	24.668	25.837	-0.037178					47	31	3	0	0	0	0.4196	1	929	929		12.959	5.7658	1	59550	+		15836	20547	10837	10846	18306	18306					-0.0967598184893177
IEEIFCKKET	10	Unmodified	_IEEIFCKKET_					0	0	0			REV__ENST00000505521.1_1_5:177019227-177019656:+|nuORF	REV__ENST00000505521.1_1_5:177019227-177019656:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.932861328125	3	413.881168	1238.62167	1.803	0.00074623	0.71044	0.00029404	2.5134	0.0010403	413.88142220230867	44.276	0.65443	44.273	44.008	44.662	-0.002449					39	15	3	0	0	0	0.37624	1	3478	3478		14.086	0.57807	1	332340	+		15837	27883	10838	10847	18307	18307					0.011908868773844006
IEEKGAVDAL	10	Unmodified	_IEEKGAVDAL_					0	0	0		ENSG00000107625|ENST00000373585|DDX50	ENSG00000107625|ENST00000373585|DDX50	ENSG00000107625|ENST00000373585|DDX50	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.779541015625	2	522.782222	1043.54989	-0.93546	-0.00048904	-0.27996	-0.00014636	-1.2154	-0.0006354	522.7819053206393	42.633	0.57133	43.067	42.765	43.336	0.4334					34	13	3	0	0	0	0.18075	1	3813	3813		90.601	5.6853	1	1063400			15838	2356	10839	10848	18308	18308					0.029857155152058112
IEEKGAVDAL	10	Unmodified	_IEEKGAVDAL_					0	0	0		ENSG00000107625|ENST00000373585|DDX50	ENSG00000107625|ENST00000373585|DDX50	ENSG00000107625|ENST00000373585|DDX50	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	522.782222	1043.54989	-1.7007	-0.0008891	0.28295	0.00014792	-1.4178	-0.00074118	522.7823326704092	42.451	0.98029	43.149	42.85	43.83	0.69754	0.041135	0.00037314	NaN	90.601	48	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	815500			15839	2356	10839	10848							0.029857155152058112
IEELPSGFLV	10	Unmodified	_IEELPSGFLV_					0	0	0		ENST00000522061.5_1_8:74609632-74621347:-|nuORF	ENST00000522061.5_1_8:74609632-74621347:-|nuORF	ENST00000522061.5_1_8:74609632-74621347:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.805419921875	2	552.30279	1102.59103	-0.067342	-3.7193E-05	0.19407	0.00010718	0.12673	6.9992E-05	552.3027246004663	68.17	0.43629	68.201	67.979	68.416	0.030571					23	15	2	0	0	0	0.71042	1	6491	6491		44.117	5.3632	1	60754			15840	13180	10840	10849	18309	18309					0.043834765546762355
IEELPSGFLV	10	Unmodified	_IEELPSGFLV_					0	0	0		ENST00000522061.5_1_8:74609632-74621347:-|nuORF	ENST00000522061.5_1_8:74609632-74621347:-|nuORF	ENST00000522061.5_1_8:74609632-74621347:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	552.30279	1102.59103	-0.69673	-0.0003848	0.58465	0.0003229	-0.11208	-6.1904E-05	552.3029292683707	68.255	0.49457	68.276	68.153	68.648	0.021599	0.024331	0.00047201	NaN	44.117	31	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58818			15841	13180	10840	10849							0.043834765546762355
IEELQKPGKN	10	Unmodified	_IEELQKPGKN_					0	0	0		ENSG00000187889|ENST00000343433|FYB2	ENSG00000187889|ENST00000343433|FYB2	ENSG00000187889|ENST00000343433|FYB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.3197631835938	2	578.322045	1154.62954	-1.36	-0.00078649	-1.1758	-0.00067998	-2.5357	-0.0014665	578.3215937705486	92.438	2.8262	92.624	91.324	94.15	0.18582					174	66	3	0	0	0	0.85981	1	9259	9259		35.152	3.6222	1	562630			15842	7890	10841	10850	18310	18310					0.058407821891933054
IEESGEHII	9	Unmodified	_IEESGEHII_					0	0	0		ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7593994140625	2	513.758746	1025.50294	-1.009	-0.00051839	0.053579	2.7526E-05	-0.95544	-0.00049086	513.7586405840968	42.845	0.70354	43.279	43.006	43.71	0.4334					31	16	3	0	0	0	0.22631	1	3851	3851		71.296	0	1	942810			15843	6314	10842	10851	18311	18311					-0.00879144035934587
IEESGEHII	9	Unmodified	_IEESGEHII_					0	0	0		ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7577514648438	2	513.758746	1025.50294	-1.5252	-0.00078357	0.56407	0.0002898	-0.96111	-0.00049378	513.7589209576093	42.609	0.50017	43.306	43.132	43.632	0.69754					26	11	3	0	0	0	0.17307	1	3833	3833		79.451	8.1553	1	834400			15844	6314	10842	10851	18312	18312					-0.00879144035934587
IEESSRTIKPT	11	Unmodified	_IEESSRTIKPT_					0	0	0		ENST00000371626.8_1_1:52486345-52486603:-|nuORF	ENST00000371626.8_1_1:52486345-52486603:-|nuORF	ENST00000371626.8_1_1:52486345-52486603:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	630.8489379882812	2	630.843342	1259.67213	6.6109	0.0041705	2.8483	0.0017968	9.4592	0.0059673	630.8449691217351	110.19	0.61125	110.25	110.05	110.66	0.068001					45	21	3	0	0	0	0.66009	1	13373	13373		37.508	9.4267	1	1789400			15845	10668	10843	10852	18313	18313					0.05268132526748559
IEESTTVVTTK	11	Unmodified	_IEESTTVVTTK_					0	0	0		CON__P05784	CON__P05784	CON__P05784	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2469482421875	3	403.218726	1206.63435	-1.7907	-0.00072204	-0.80344	-0.00032396	-2.5941	-0.001046	403.2176506716707	104.16	0.2356	104.33	104.22	104.46	0.17096					6	5	2	0	0	0	0.17415	1	11041	11041		18.966	0	1	46871		+	15846	588	10844	10853	18314	18314					0.03929621541283268
IEEVLALPK	9	Unmodified	_IEEVLALPK_					0	0	0			REV__ENST00000487953.1_1_1:233091430-233112053:+|nuORF	REV__ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3076477050781	2	506.307875	1010.6012	-0.22503	-0.00011393	2.1509	0.001089	1.9259	0.00097507	506.3089485725691	49.441	1.8113	49.348	48.371	50.182	-0.093182					75	43	2	0	0	0	0.78058	1	3720	3720		30.504	1.3541	1	253850	+		15847	19251	10845	10854	18315	18315					0.09632084279905939
IEFGLKAFRL	10	Unmodified	_IEFGLKAFRL_					0	0	0			REV__ENST00000591224.1_1_19:46181025-46181577:+|nuORF	REV__ENST00000591224.1_1_19:46181025-46181577:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3573608398438	2	597.355691	1192.69683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.992	1	94.433	93.933	94.933	0.44099								0	0	0	0.45132	1	11211	11211		26.693	2.1737	1		+		15848	16162	10846	10855	18316	18316					0.10818857190793096
IEFHKVLQKP	10	Unmodified	_IEFHKVLQKP_					0	0	0			REV__CON__Q0V8M9;REV__nc|ENSG00000162267|Q06033-2|ITIH3	REV__nc|ENSG00000162267|Q06033-2|ITIH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.869384765625	2	619.866423	1237.71829	1.6172	0.0010025	2.9706	0.0018414	4.5878	0.0028438	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.8651	1	11169	11169		25.574	1.0549	1	1541100	+	+	15849	15995;20801	10847	10856	18317	18317					0.10894242219501393
IEFKEKLLSA	10	Unmodified	_IEFKEKLLSA_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3425903320312	2	589.344989	1176.67542	-0.6745	-0.00039751	-2.9294	-0.0017264	-3.6039	-0.002124	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.80179	1	9713	9713		39.253	1.4413	1	16185000			15850	1742	10848	10857	18318	18318					0.09415427371459373
IEFLAITIR	9	Unmodified	_IEFLAITIR_					0	0	0			REV__ENSG00000164299|ENST00000296739|SPZ1	REV__ENSG00000164299|ENST00000296739|SPZ1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326904296875	2	538.329142	1074.64373	-1.4901	-0.00080219	-2.8806	-0.0015507	-4.3708	-0.0023529	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.7932	1	10785	10785		20.947	0.10978	1	93615000	+		15851	21061	10849	10858	18319	18319					0.1093947940810267
IEFLIKMGT	9	Oxidation (M)	_IEFLIKM(Oxidation (M))GT_		IEFLIKM(1)GT		IEFLIKM(42)GT	0	0	1		chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|31	chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|31	chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|31	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	534.2937622070312	2	534.293911	1066.57327	-1.5023	-0.00080264	2.917	0.0015585	1.4148	0.00075589	534.295427117142	88.335	3.7823	88.504	87.046	90.828	0.16923					157	88	2	0	0	0	0.67345	1	8737	8737		42.396	6.7778	1	483520			15852	436	10850	10859	18320	18320		5			0.042644380281672056
IEFLLKCTQMN	11	Unmodified	_IEFLLKCTQMN_					0	0	0			REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31	REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.2730712890625	3	447.229803	1338.66758	-1.7854	-0.0007985	-0.37018	-0.00016556	-2.1556	-0.00096406	447.56474856545015	106.96	0.12217	107.02	106.96	107.08	0.053757					4	2	2	0	0	0	0.17521	1	11396	11396		22.562	3.5953	1	45494	+		15853	20506	10851	10860	18321	18321					0.011792087879939572
IEGERRPA	8	Unmodified	_IEGERRPA_					0	0	0			REV__ENST00000592217.2_1_19:46271832-46273041:+|nuORF	REV__ENST00000592217.2_1_19:46271832-46273041:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2536926269531	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.91472	1	9672	9672		44.117	6.9577	1	1215000	+		15854	29208	10852	10861	18322	18322					0.027191324691784757
IEGHQLQVF	9	Unmodified	_IEGHQLQVF_					0	0	0			REV__nc|ENSG00000113742|Q17RY0-3|CPEB4	REV__nc|ENSG00000113742|Q17RY0-3|CPEB4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7874145507812	2	535.785099	1069.55564	0.13474	7.2191E-05	3.6882	0.0019761	3.823	0.0020483	535.7869150542037	77.548	2.4284	77.954	77.388	79.816	0.40531					160	57	4	0	0	0	0.58668	1	8939	8939		47.657	1.6851	1	5446200	+		15855	18013	10853	10862	18323	18323					0.023648588175319674
IEGIPEGK	8	Unmodified	_IEGIPEGK_					0	0	0		nc|ENSG00000196792|Q13033-2|STRN3;ENSG00000196792|ENST00000357479|STRN3	nc|ENSG00000196792|Q13033-2|STRN3	nc|ENSG00000196792|Q13033-2|STRN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.7345886230469	2	421.734543	841.454533	-1.1568	-0.00048785	1.2799	0.00053976	0.12308	5.1906E-05	421.7349361694888	39.674	1.2034	40.228	39.401	40.604	0.55449					55	27	3	0	0	0	0.60357	1	3365	3365		71.296	0	1	314610			15856	8103	10854	10863	18324	18324					0.02746407114818794
IEGLIEREYL	10	Unmodified	_IEGLIEREYL_					0	0	0		nc|ENSG00000036257|Q13618-3|CUL3;ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3;ENST00000497715.1_1_2:225338964-225343150:-|nuORF	nc|ENSG00000036257|Q13618-3|CUL3	nc|ENSG00000036257|Q13618-3|CUL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	617.8362426757812	2	617.837528	1233.6605	0.52563	0.00032475	-0.49963	-0.00030869	0.025996	1.6061E-05	617.8368535386144	65.831	0.55819	66.217	66.028	66.586	0.38581					22	13	2	0	0	0	0.51401	1	7166	7166		54.722	8.7501	1	383440			15857	901	10855	10864	18325	18325					0.05301935503439381
IEGLIEREYL	10	Unmodified	_IEGLIEREYL_					0	0	0		nc|ENSG00000036257|Q13618-3|CUL3;ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3;ENST00000497715.1_1_2:225338964-225343150:-|nuORF	nc|ENSG00000036257|Q13618-3|CUL3	nc|ENSG00000036257|Q13618-3|CUL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	618.3380126953125	2	617.837528	1233.6605	0.53876	0.00033287	-0.50045	-0.00030919	0.038314	2.3672E-05	617.8369151233966	65.695	0.57646	66.247	66.125	66.701	0.5526					26	15	3	0	0	0	0.17795	1	7172	7172		91.265	22.478	1	321270			15858	901	10855	10864	18326	18326					0.05301935503439381
IEGNVRLP	8	Unmodified	_IEGNVRLP_					0	0	0		ENSG00000160007|ENST00000672722|ARHGAP35	ENSG00000160007|ENST00000672722|ARHGAP35	ENSG00000160007|ENST00000672722|ARHGAP35	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2612609863281	2	449.261259	896.507966	-0.72218	-0.00032445	-0.93186	-0.00041865	-1.654	-0.00074309	449.2606459805973	68.937	0.66402	68.9	68.558	69.222	-0.036957					45	25	2	0	0	0	0.86791	1	6666	6666		28.254	1.4582	1	202090			15859	5552	10856	10865	18327	18327					0.055572046173210765
IEGPDAKL	8	Unmodified	_IEGPDAKL_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.734619140625	2	421.734543	841.454533	-0.9868	-0.00041617	1.1955	0.00050416	0.20865	8.7996E-05	421.7348805424128	39.724	0.90596	40.092	39.643	40.549	0.36797					47	21	3	0	0	0	0.58928	1	3352	3352		71.877	3.0906	1	383790			15860	3371	10857	10866	18328	18328					0.027464071148074254
IEGPDAKL	8	Unmodified	_IEGPDAKL_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.73406982421875	2	421.734543	841.454533	-1.1568	-0.00048785	1.2799	0.00053976	0.12308	5.1906E-05	421.7349361694888	39.674	1.2034	40.228	39.401	40.604	0.55449					55	27	3	0	0	0	0.48059	2	3340	3340;3350		76.774	13.096	1	314610			15861	3371	10857	10866	18329;18330	18329					0.027464071148074254
IEGSPTCH	8	Unmodified	_IEGSPTCH_					0	0	0			REV__ENST00000262291.8_1_17:57917713-57917824:+|nuORF	REV__ENST00000262291.8_1_17:57917713-57917824:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.1888427734375	2	422.186903	842.359253	2.2164	0.00093575	1.5889	0.0006708	3.8053	0.0016065	422.18787253857664	105.23	1.5658	105.39	105.1	106.66	0.15583					118	51	5	0	0	0	0.91005	1	12843	12843		42.474	0	1	2294800	+		15862	24414	10858	10867	18331	18331					-0.06823269347887617
IEGVELEL	8	Unmodified	_IEGVELEL_					0	0	0			REV__nc|ENSG00000129003|Q709C8-4|VPS13C	REV__nc|ENSG00000129003|Q709C8-4|VPS13C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.2492370605469	2	451.247483	900.480414	-1.0589	-0.00047784	3.7993	0.0017144	2.7403	0.0012366	451.2490578408484	67.679	1.2813	67.739	67.313	68.595	0.059288					106	47	3	0	0	0	0.86288	1	6019	6019		26.796	4.8362	1	166740	+		15863	18801	10859	10868	18332	18332					0.026192565664246104
IEGVRIPDEVR	11	Unmodified	_IEGVRIPDEVR_					0	0	0			REV__nc|ENSG00000226098|P0C7V7|SEC11B	REV__nc|ENSG00000226098|P0C7V7|SEC11B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.859375	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.65746	1	13017	13017		37.812	1.3648	1	27133000	+		15864	30210	10860	10869	18333	18333					0.07451545000526494
IEHFTSHIK	9	Unmodified	_IEHFTSHIK_					0	0	0		ENST00000184266.2_1_3:120320096-120321175:+|nuORF	ENST00000184266.2_1_3:120320096-120321175:+|nuORF	ENST00000184266.2_1_3:120320096-120321175:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.2907104492188	2	556.298373	1110.58219	-0.12389	-6.8919E-05	-0.29086	-0.00016181	-0.41475	-0.00023072	556.2981738648185	75.221	0.59676	75.785	75.541	76.138	0.56458					27	14	3	0	0	0	0.71772	1	8549	8549		39.253	0.44669	1	558130			15865	9090	10861	10870	18334	18334					0.03132547708855782
IEHGIITNW	9	Unmodified	_IEHGIITNW_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.7854614257812	2	541.785099	1081.55564	-0.22268	-0.00012064	0.56378	0.00030545	0.3411	0.0001848	541.7852590351226	56.903	1.7601	56.891	56.59	58.35	-0.012203					157	62	4	0	0	0	0.35373	1	5181	5181		60.972	6.1956	1	5602900			15866	2370	10862	10871	18335	18335					0.01812858817538654
IEHGIITNW	9	Unmodified	_IEHGIITNW_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7852172851562	2	541.785099	1081.55564	0.62478	0.0003385	-0.32404	-0.00017556	0.30074	0.00016294	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.15928	5	5248	5187;5248;5292;5310;5346		82.305	4.5796	1	5802700			15867	2370	10862	10871	18336;18337;18338;18339;18340	18337					0.01812858817538654
IEHGIITNW	9	Unmodified	_IEHGIITNW_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.785400390625	2	541.785099	1081.55564	-0.1772	-9.6005E-05	0.51969	0.00028156	0.34249	0.00018556	541.7852873202811	56.84	2.4261	56.873	56.56	58.986	0.033184					182	81	4	0	0	0	0.09311	3	5148	5148;5218;5227		94.006	14.575	1	6132200			15868	2370	10862	10871	18341;18342;18343	18341					0.01812858817538654
IEHIRSFG	8	Unmodified	_IEHIRSFG_					0	0	0			REV__nc|ENSG00000186684|Q4G0S4|CYP27C1	REV__nc|ENSG00000186684|Q4G0S4|CYP27C1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2776184082031	2	479.758884	957.503215	-0.82876	-0.0003976	-2.7541	-0.0013213	-3.5828	-0.0017189	479.7573680381294	83.886	1.8333	84.051	82.644	84.477	0.1651					71	42	2	0	0	0	0.4196	1	8021	8021		18.324	0	1	68080	+		15869	22875	10863	10872	18344	18344					0.022763204745729126
IEHSHTHH	8	Unmodified	_IEHSHTHH_					0	0	0		ENST00000587829.5_1_19:37815142-37838149:+|nuORF	ENST00000587829.5_1_19:37815142-37838149:+|nuORF	ENST00000587829.5_1_19:37815142-37838149:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.2908630371094	2	499.233565	996.452576	0.14402	7.1902E-05	1.8367	0.00091696	1.9808	0.00098886	499.2343395455939	55.301	0.66994	55.869	55.404	56.074	0.56836					19	15	2	0	0	0	0.4196	1	5710	5710		18.324	0.95945	1	162990			15870	14199	10864	10873	18345	18345					-0.0457920885042995
IEHVVADTY	9	Unmodified	_IEHVVADTY_					0	0	0			REV__nc|ENSG00000138115|P10632-2|CYP2C8	REV__nc|ENSG00000138115|P10632-2|CYP2C8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.7599487304688	2	523.761289	1045.50803	-0.042751	-2.2391E-05	-0.43296	-0.00022677	-0.47572	-0.00024916	523.7607727774529	60.587	0.95979	60.575	60.077	61.037	-0.012203					59	22	4	0	0	0	0.72402	1	5628	5628		38.806	1.647	1	308610	+		15871	19442	10865	10874	18346	18346					-0.012908401733284336
IEIFLPTKV	9	Unmodified	_IEIFLPTKV_					0	0	0		nc|ENSG00000165181|Q5VXU9-3|SHOC1;nc|ENSG00000165181|Q5VXU9|SHOC1;ENSG00000165181|ENST00000682961|SHOC1;nc|ENSG00000165181|Q5VXU9-2|SHOC1	nc|ENSG00000165181|Q5VXU9-3|SHOC1	nc|ENSG00000165181|Q5VXU9-3|SHOC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.3057861328125	2	530.326068	1058.63758	1.185	0.00062844	-4.4017	-0.0023343	-3.2167	-0.0017059	530.3232986706688	33.725	0.37178	33.895	33.737	34.109	0.16971					12	8	2	0	0	0	0.20789	1	2473	2473		20.947	0	1	78242			15872	15066	10866	10875	18347	18347					0.11060961176622186
IEIGNITN	8	Unmodified	_IEIGNITN_					0	0	0			REV__ENSG00000132953|ENST00000255305|XPO4	REV__ENSG00000132953|ENST00000255305|XPO4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2676696777344	2	437.23745	872.460347	1.2076	0.00052799	-0.46695	-0.00020417	0.74062	0.00032383	437.2372121353422	50.923	0.44753	51.675	51.491	51.938	0.75174					18	10	2	0	0	0	0.4196	1	5047	5047		23.042	0	1	270140	+		15873	19047	10867	10876	18348	18348					0.019015056264606756
IEIKIVRPWA	10	Unmodified	_IEIKIVRPWA_					0	0	0		nc|ENSG00000135506|Q13438-8|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-4|OS9;ENSG00000135506|ENST00000315970|OS9	nc|ENSG00000135506|Q13438-8|OS9	nc|ENSG00000135506|Q13438-8|OS9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	409.25701904296875	3	408.920286	1223.73903	2.7179	0.0011114	2.0537	0.00083978	4.7716	0.0019512	408.92110256360985	104.72	4.0561	104.68	103.08	107.14	-0.04039					239	96	4	0	0	0	0.85694	1	11598	11598		20.837	6.7511	1	3838400			15874	4030	10868	10877	18349	18349					0.1361083259919269
IEIKPGIV	8	Unmodified	_IEIKPGIV_					0	0	0			REV__nc|ENSG00000141441|Q9H706-2|GAREM1	REV__nc|ENSG00000141441|Q9H706-2|GAREM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77978515625	2	434.778754	867.542954	-0.52026	-0.0002262	3.3297	0.0014477	2.8095	0.0012215	434.78008033903114	55.345	1.972	55.318	54.208	56.18	-0.027275					116	58	3	0	0	0	0.81724	1	5122	5122		14.664	1.7049	1	290730	+		15875	19685	10869	10878	18350	18350					0.10388447425282266
IEILAPPN	8	Unmodified	_IEILAPPN_					0	0	0		ENSG00000164022|ENST00000672341|AIMP1;nc|ENSG00000164022|Q12904-2|AIMP1	ENSG00000164022|ENST00000672341|AIMP1	ENSG00000164022|ENST00000672341|AIMP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.2389831542969	2	433.752736	865.490919	0.5144	0.00022312	-2.6561	-0.0011521	-2.1417	-0.00092896	433.75158996847057	76.168	0.76994	76.301	75.939	76.709	0.13325					36	23	2	0	0	0	0.4196	1	7139	7139		3.41	0	1	35881			15876	5901	10870	10879	18351	18351					0.05279284011521668
IEILAVDLP	9	Unmodified	_IEILAVDLP_					0	0	0		ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958679199219	2	491.794601	981.574648	-0.25318	-0.00012451	2.5897	0.0012736	2.3365	0.0011491	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.7932	1	3642	3642		24.203	5.8783	1	1502200			15877	3562	10871	10880	18352	18352					0.08312395388554705
IEILINLIIDN	11	Unmodified	_IEILINLIIDN_					0	0	0			REV__nc|ENSG00000197415|Q14D04-2|VEPH1	REV__nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.883056640625	2	641.884478	1281.7544	-0.046992	-3.0164E-05	-3.0348	-0.001948	-3.0818	-0.0019782	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.73621	2	9745	9745;9993		25.126	0.99649	1	2217900	+		15878	23228	10872	10881	18353;18354	18353					0.12479654605704127
IEILINLIIDN	11	Unmodified	_IEILINLIIDN_					0	0	0			REV__nc|ENSG00000197415|Q14D04-2|VEPH1	REV__nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8831176757812	2	641.884478	1281.7544	-0.050338	-3.2311E-05	-3.0062	-0.0019297	-3.0566	-0.001962	641.8823954757748	95.916	2.4458	95.982	94.508	96.954	0.06591					198	57	4	0	0	0	0.61369	1	10183	10183		42.864	14.982	1	1572400	+		15879	23228	10872	10881	18355	18355					0.12479654605704127
IEILINLIIDN	11	Unmodified	_IEILINLIIDN_					0	0	0			REV__nc|ENSG00000197415|Q14D04-2|VEPH1	REV__nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8818969726562	2	641.884478	1281.7544	-0.050098	-3.2157E-05	-3.0613	-0.001965	-3.1114	-0.0019972	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.60687	1	10205	10205		43.651	2.2242	1	3644700	+		15880	23228	10872	10881	18356	18356					0.12479654605704127
IEILINLIIDN	11	Unmodified	_IEILINLIIDN_					0	0	0			REV__nc|ENSG00000197415|Q14D04-2|VEPH1	REV__nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8831787109375	2	641.884478	1281.7544	0.9141	0.00058675	-4.0885	-0.0026243	-3.1744	-0.0020376	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.66929	1	9969	9969		36.447	3.6343	1	4136300	+		15881	23228	10872	10881	18357	18357					0.12479654605704127
IEILINLIIDN	11	Unmodified	_IEILINLIIDN_					0	0	0			REV__nc|ENSG00000197415|Q14D04-2|VEPH1	REV__nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8836669921875	2	641.884478	1281.7544	-1.1528	-0.00073997	-2.0452	-0.0013128	-3.198	-0.0020528	641.8829970841505	95.709	2.5048	95.911	94.329	96.834	0.20242					216	59	5	0	0	0	0.7342	1	9899	9899		25.574	0	1	1922900	+		15882	23228	10872	10881	18358	18358					0.12479654605704127
IEILINLIIDN	11	Unmodified	_IEILINLIIDN_					0	0	0			REV__nc|ENSG00000197415|Q14D04-2|VEPH1	REV__nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8829956054688	2	641.884478	1281.7544	-1.1529	-0.00074004	-2.0582	-0.0013212	-3.2112	-0.0020612	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.69995	2	9939	9939;10155		31.53	4.8369	1	3521600	+		15883	23228	10872	10881	18359;18360	18359					0.12479654605704127
IEILLVPL	8	Unmodified	_IEILLVPL_					0	0	0		ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.942626953125	2	455.304604	908.594655	-1.1967	-0.00054486	-1.7235	-0.0007847	-2.9202	-0.0013296	455.30366299026707	72.072	0.74931	72.152	71.889	72.638	0.080032					34	25	2	0	0	0	0.4196	1	6603	6603		12.959	0	1	85969			15884	10840	10873	10882	18361	18361					0.1367019111917216
IEILLVPL	8	Unmodified	_IEILLVPL_					0	0	0		ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	455.304604	908.594655	-1.3997	-0.00063728	-1.7255	-0.00078561	-3.1251	-0.0014229	455.30375726612954	72.492	0.41185	72.492	72.231	72.643	0	0.35429	0.00076129	NaN	12.959	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58947			15885	10840	10873	10882							0.1367019111917216
IEILLVPL	8	Unmodified	_IEILLVPL_					0	0	0		ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	455.304604	908.594655	-0.13527	-6.159E-05	-2.6692	-0.0012153	-2.8045	-0.0012769	455.30324777242373	72.23	0.62173	72.267	71.966	72.588	0.037148	0.12856	-9.8069E-05	NaN	12.959	39	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81743			15886	10840	10873	10882							0.1367019111917216
IEILLVPL	8	Unmodified	_IEILLVPL_					0	0	0		ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	455.304604	908.594655	-0.68353	-0.00031122	-3.8762	-0.0017649	-4.5598	-0.0020761	455.3035129562242	72.119	0.66676	72.079	71.77	72.437	-0.04039	-0.059344	-0.0011972	NaN	12.959	47	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124300			15887	10840	10873	10882							0.1367019111917216
IEILLVPL	8	Unmodified	_IEILLVPL_					0	0	0		ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	455.304604	908.594655	-0.086549	-3.9406E-05	-2.7773	-0.0012645	-2.8639	-0.0013039	455.30323794612644	72.003	0.61699	72.043	71.774	72.391	0.040222	-0.094877	-0.00019657	NaN	12.959	45	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122270			15888	10840	10873	10882							0.1367019111917216
IEILLVPL	8	Unmodified	_IEILLVPL_					0	0	0		ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	ENST00000377503.6_1_5:159681329-159707642:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	455.304604	908.594655	-1.2127	-0.00055216	-1.6184	-0.00073685	-2.8311	-0.001289	455.3037724147231	71.887	0.5379	72.018	71.768	72.306	0.13146	-0.12011	0.0008588	NaN	12.959	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112890			15889	10840	10873	10882							0.1367019111917216
IEILMVSVK	9	Unmodified	_IEILMVSVK_					0	0	0		chr7:33352049-33352859|27|14.07|0.0|20.42|+|0|BBS9,BBS9|1	chr7:33352049-33352859|27|14.07|0.0|20.42|+|0|BBS9,BBS9|1	chr7:33352049-33352859|27|14.07|0.0|20.42|+|0|BBS9,BBS9|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.8180541992188	2	516.312103	1030.60965	3.1012	0.0016012	0.56309	0.00029073	3.6643	0.0018919	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.78983	1	12960	12960		27.882	2.3082	1	1162600			15890	498	10874	10883	18362	18362					0.09557314924882121
IEILPVAVAT	10	Unmodified	_IEILPVAVAT_					0	0	0		ENSG00000184922|ENST00000331495|FMNL1;nc|ENSG00000184922|O95466-2|FMNL1;nc|ENSG00000184922|O95466-3|FMNL1;ENST00000587856.1_1_17:43318772-43319102:+|nuORF	ENSG00000184922|ENST00000331495|FMNL1	ENSG00000184922|ENST00000331495|FMNL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3168334960938	2	513.3157	1024.61685	-0.86606	-0.00044456	1.9618	0.001007	1.0958	0.00056247	513.3165332025184	43.367	1.6866	43.367	42.894	44.58	0.00016785					82	40	3	0	0	0	0.8608	1	3363	3363		34.173	6.2903	1	411860			15891	7654	10875	10884	18363	18363					0.10552370796949617
IEIPVDTII	9	Unmodified	_IEIPVDTII_					0	0	0			REV__ENSG00000240720|ENST00000458448|LRRD1	REV__ENSG00000240720|ENST00000458448|LRRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7997131347656	2	506.799883	1011.58521	-0.86379	-0.00043777	2.2593	0.001145	1.3955	0.00070725	506.8010240498416	43.849	2.352	43.815	42.486	44.838	-0.033474					86	55	2	0	0	0	0.76255	1	3521	3521		35.618	1.4457	1	326070	+		15892	23814	10876	10885	18364	18364					0.07988378043000921
IEIPVDTII	9	Unmodified	_IEIPVDTII_					0	0	0			REV__ENSG00000240720|ENST00000458448|LRRD1	REV__ENSG00000240720|ENST00000458448|LRRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.79974365234375	2	506.799883	1011.58521	-1.1816	-0.00059884	2.7931	0.0014155	1.6114	0.00081668	506.8012726682809	44.534	3.0875	44.53	42.489	45.577	-0.0041618					139	73	2	0	0	0	0.64922	1	3462	3462		44.117	8.4985	1	459990	+		15893	23814	10876	10885	18365	18365					0.07988378043000921
IEIVLAKP	8	Unmodified	_IEIVLAKP_					0	0	0		nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR	nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000125944|O43390-4|HNRNPR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78753662109375	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.80706	1	2875	2875		19.36	1.0356	1	14534000			15894	3429	10877	10886	18366	18366					0.11308733942325944
IEKAQEAR	8	Unmodified	_IEKAQEAR_					0	0	0			REV__nc|ENSG00000073350|Q6P1M3-2|LLGL2	REV__nc|ENSG00000073350|Q6P1M3-2|LLGL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28759765625	2	472.761623	943.508694	-1.7036	-0.00080542	0.59521	0.00028139	-1.1084	-0.00052402	472.7623158366255	95.192	0.28405	95.395	95.273	95.557	0.20242					10	6	2	0	0	0	0.4196	1	9704	9704		23.042	0	1	48631	+		15895	16671	10878	10887	18367	18367					0.034679992663768644
IEKAVQFFVQA	11	Unmodified	_IEKAVQFFVQA_					0	0	0		nc|ENSG00000168259|Q99615-2|DNAJC7;ENSG00000168259|ENST00000457167|DNAJC7	nc|ENSG00000168259|Q99615-2|DNAJC7	nc|ENSG00000168259|Q99615-2|DNAJC7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3588256835938	2	640.355888	1278.69722	0.92817	0.00059436	3.6966	0.0023671	4.6247	0.0029615	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.6493	1	10457	10457		38.754	8.25	1	603720			15896	6384	10879	10888	18368	18368					0.06902232120000917
IEKAYAQQLA	10	Unmodified	_IEKAYAQQLA_					0	0	0		ENSG00000165912|ENST00000298838|PACSIN3	ENSG00000165912|ENST00000298838|PACSIN3	ENSG00000165912|ENST00000298838|PACSIN3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.329833984375	2	567.811313	1133.60807	-1.1922	-0.00067694	-3.2667	-0.0018549	-4.4589	-0.0025318	567.8094258614502	93.047	0.62059	93.117	92.756	93.376	0.06987					14	14	2	0	0	0	0.37624	1	9597	9597		30.318	4.7437	1	106090			15897	6134	10880	10889	18369	18369					0.04661397160475644
IEKEGEFTL	9	Unmodified	_IEKEGEFTL_					0	0	0		ENST00000565070.5_1_16:27237776-27268891:-|nuORF;ENSG00000169189|ENST00000361439|NSMCE1;ENST00000569236.5_1_16:27236480-27252833:-|nuORF	ENST00000565070.5_1_16:27237776-27268891:-|nuORF	ENST00000565070.5_1_16:27237776-27268891:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.2764892578125	2	533.276772	1064.53899	0.4409	0.00023512	-0.69205	-0.00036905	-0.25115	-0.00013393	533.2762541526947	51.528	0.54039	52.195	51.895	52.436	0.66729					22	12	2	0	0	0	0.14236	1	5139	5139		85.161	5.4482	1	1060300			15898	13905	10881	10890	18370	18370					0.009303131409296839
IEKEKKTR	8	Unmodified	_IEKEKKTR_					0	0	0			REV__ENSG00000116095|ENST00000234453|PLEKHA3	REV__ENSG00000116095|ENST00000234453|PLEKHA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3134155273438	2	516.314023	1030.61349	0.80555	0.00041592	-1.2336	-0.00063695	-0.42809	-0.00022103	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.87922	1	10650	10650		31.955	1.4512	1	72906000	+		15899	18177	10882	10891	18371	18371					0.09941120742928433
IEKFNLKIKY	10	Unmodified	_IEKFNLKIKY_					0	0	0			REV__ENSG00000138161|ENST00000392790|CUZD1	REV__ENSG00000138161|ENST00000392790|CUZD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.392822265625	2	648.389731	1294.76491	1.6039	0.00104	3.3244	0.0021555	4.9283	0.0031955	648.3917676742469	106.97	1.0935	107.11	106.64	107.73	0.13866					101	26	4	0	0	0	0.8608	1	11520	11520		34.173	1.3601	1	58516000	+		15900	19445	10883	10892	18372	18372					0.12931682050793825
IEKFNLKIKY	10	Unmodified	_IEKFNLKIKY_					0	0	0			REV__ENSG00000138161|ENST00000392790|CUZD1	REV__ENSG00000138161|ENST00000392790|CUZD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3927612304688	2	648.389731	1294.76491	0.94475	0.00061257	4.1927	0.0027185	5.1374	0.0033311	648.3923298671006	107.11	0.98898	107.2	106.69	107.68	0.091255					92	23	4	0	0	0	0.80179	1	11536	11536		39.253	6.5023	1	51640000	+		15901	19445	10883	10892	18373	18373					0.12931682050793825
IEKGHGIR	8	Unmodified	_IEKGHGIR_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.24774169921875	2	455.266876	908.519199	-0.64342	-0.00029293	-0.99191	-0.00045158	-1.6353	-0.00074451	455.2664129005706	54.048	0.53523	54.023	53.645	54.181	-0.024754					16	12	2	0	0	0	0.4196	1	4828	4828		17.365	0	1	43055			15902	1742	10884	10893	18374	18374					0.06128026711473922
IEKIEEELS	9	Unmodified	_IEKIEEELS_					0	0	0			REV__ENSG00000158669|ENST00000396987|GPAT4	REV__ENSG00000158669|ENST00000396987|GPAT4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3172607421875	2	545.287337	1088.56012	2.2586	0.0012316	0.94017	0.00051266	3.1988	0.0017442	545.2855569797155	90.986	0.11781	90.919	90.839	90.957	-0.067093					4	2	2	0	0	0	0.20789	1	9551	9551		20.947	0	1	45375	+		15903	20617	10885	10894	18375	18375					0.019382784497793182
IEKIKGSK	8	Unmodified	_IEKIKGSK_					0	0	0		ENST00000488147.1_1_1:17367-18318:-|nuORF;ENST00000400706.3_1_12:87289-88257:+|nuORF;ENST00000557932.5_1_15:102506277-102513446:+|nuORF;ENST00000568710.1_1_16:67585-84971:-|nuORF;nc|ENSG00000292372|Q9NQA3|WASH6P;nc|ENSG00000185596|C4AMC7|WASH3P;nc|ENSG00000291134|Q6VEQ5|WASH2P;ENSG00000181404|ENST00000696149|WASHC1;nc|ENSG00000234769|A8MWX3|WASH4P;ENSG00000182484|ENST00000359512|WASH6P	ENST00000488147.1_1_1:17367-18318:-|nuORF	ENST00000488147.1_1_1:17367-18318:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.94317626953125	2	451.78711	901.559667	-1.2967	-0.00058583	0.50786	0.00022944	-0.78883	-0.00035638	451.7868619062995	54.5	0.13488	54.555	54.479	54.614	0.055614					8	5	2	0	0	0	0.4196	1	4499	4499		7.1934	0	1	44502			15904	7387	10886	10895	18376	18376					0.10494948311236385
IEKKEKRD	8	Unmodified	_IEKKEKRD_					0	0	0		ENSG00000125676|ENST00000245838|THOC2;nc|ENSG00000125676|Q8NI27-2|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.89679	1	9066	9066		37.812	7.3079	1	12189000			15905	3405	10887	10896	18377	18377					0.07224530363305348
IEKKEKYFRL	10	Unmodified	_IEKKEKYFRL_					0	0	0			REV__ENSG00000145721|ENST00000274382|LIX1	REV__ENSG00000145721|ENST00000274382|LIX1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9329833984375	3	451.934484	1352.78162	-0.99129	-0.000448	-2.9992	-0.0013554	-3.9905	-0.0018034	451.9330862164875	100.92	2.2384	100.92	100.04	102.28	0					149	53	4	0	0	0	0.85086	1	10210	10210		19.263	2.0959	1	534780	+		15906	19960	10888	10897	18378	18378					0.1193418293673858
IEKKESSKR	9	Unmodified	_IEKKESSKR_					0	0	0			REV__ENST00000505222.5_1_6:82901346-82950269:-|nuORF	REV__ENST00000505222.5_1_6:82901346-82950269:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.306640625	2	552.822212	1103.62987	-1.443	-0.00079773	3.6054	0.0019931	2.1624	0.0011954	552.8236884349576	92.57	0.5094	92.762	92.436	92.945	0.19239					17	11	2	0	0	0	0.20789	1	9277	9277		18.262	7.9968	1	49892	+		15907	16089	10889	10898	18379	18379					0.08220201909034586
IEKKIDPPPP	10	Unmodified	_IEKKIDPPPP_					0	0	0			REV__ENSG00000114416|ENST00000357559|FXR1	REV__ENSG00000114416|ENST00000357559|FXR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3305053710938	2	567.331882	1132.64921	-0.50942	-0.00028901	-1.8517	-0.0010506	-2.3612	-0.0013396	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.66675	1	10555	10555		46.457	3.5925	1	5685000	+		15908	18046	10890	10899	18380	18380					0.0881915819995811
IEKKNILQTL	10	Unmodified	_IEKKNILQTL_					0	0	0			REV__nc|ENSG00000100815|Q15643-2|TRIP11	REV__nc|ENSG00000100815|Q15643-2|TRIP11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.91851806640625	3	400.583451	1198.72852	0.57912	0.00023199	0.86778	0.00034762	1.4469	0.0005796	400.5838627795449	24.287	0.98159	24.343	23.961	24.942	0.055487					52	24	3	0	0	0	0.86802	1	895	895		27.047	0.98393	1	65016	+		15909	17223	10891	10900	18381	18381					0.13710805154096306
IEKKREVDS	9	Unmodified	_IEKKREVDS_					0	0	0			REV__nc|ENSG00000183378|Q7RTZ1|OVCH2	REV__nc|ENSG00000183378|Q7RTZ1|OVCH2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3065185546875	2	552.306395	1102.59824	-0.5921	-0.00032702	0.79388	0.00043846	0.20178	0.00011145	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.7932	1	9080	9080		24.519	0	1	1102700	+		15910	22602	10892	10901	18382	18382					0.05104209155092576
IEKKREVDS	9	Unmodified	_IEKKREVDS_					0	0	0			REV__nc|ENSG00000183378|Q7RTZ1|OVCH2	REV__nc|ENSG00000183378|Q7RTZ1|OVCH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.305908203125	2	552.306395	1102.59824	-1.4446	-0.00079788	1.6112	0.00088988	0.16659	9.2009E-05	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.75725	1	9408	9408		36.447	4.9169	1	1677300	+		15911	22602	10892	10901	18383	18383					0.05104209155092576
IEKKRFMIL	9	Unmodified	_IEKKRFMIL_					0	0	0		nc|ENSG00000132256|Q9C035-2|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3428955078125	2	589.359919	1176.70529	-0.6345	-0.00037395	1.4174	0.00083539	0.78295	0.00046144	589.3609254837876	93.942	0.2149	93.988	93.794	94.009	0.045448					5	4	2	0	0	0	0.20789	1	9863	9863		15.642	0	1	67641			15912	14920	10893	10902	18384	18384					0.12400087835771956
IEKLEEALIKP	11	Unmodified	_IEKLEEALIKP_					0	0	0			REV__nc|ENSG00000168016|O15050|TRANK1	REV__nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8819580078125	2	641.884478	1281.7544	0.89498	0.00057447	-4.1498	-0.0026637	-3.2548	-0.0020892	641.8816647321656	95.707	2.6304	95.87	94.248	96.878	0.16316					218	62	4	0	0	0	0.66009	1	9766	9766		37.508	1.0614	1	2156900	+		15913	21451	10894	10903	18385	18385					0.12479654605704127
IEKLFPDKGT	10	Unmodified	_IEKLFPDKGT_					0	0	0		ENST00000380437.8_1_9:19290781-19335045:+|nuORF;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C	ENST00000380437.8_1_9:19290781-19335045:+|nuORF	ENST00000380437.8_1_9:19290781-19335045:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3201293945312	2	574.321514	1146.62847	-1.0331	-0.00059332	-2.6119	-0.0015001	-3.645	-0.0020934	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.8545	1	9851	9851		36.447	1.2947	1	1380900			15914	4173	10895	10904	18386	18386					0.06102567820266813
IEKLFPDKGT	10	Unmodified	_IEKLFPDKGT_					0	0	0		ENST00000380437.8_1_9:19290781-19335045:+|nuORF;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C	ENST00000380437.8_1_9:19290781-19335045:+|nuORF	ENST00000380437.8_1_9:19290781-19335045:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3193969726562	2	574.321514	1146.62847	0.59155	0.00033974	-4.0871	-0.0023473	-3.4955	-0.0020075	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.8545	1	9640	9640		36.447	0.82846	1	1777600			15915	4173	10895	10904	18387	18387					0.06102567820266813
IEKLFPDKGT	10	Unmodified	_IEKLFPDKGT_					0	0	0		ENST00000380437.8_1_9:19290781-19335045:+|nuORF;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C	ENST00000380437.8_1_9:19290781-19335045:+|nuORF	ENST00000380437.8_1_9:19290781-19335045:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3192138671875	2	574.321514	1146.62847	-1.3729	-0.0007885	-2.1573	-0.001239	-3.5302	-0.0020275	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.8545	1	9636	9636		36.447	1.2947	1	1586900			15916	4173	10895	10904	18388	18388					0.06102567820266813
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3919067382812	2	648.393336	1294.77212	0.024156	1.5662E-05	-0.92906	-0.00060239	-0.9049	-0.00058673	648.3927913840552	106.64	2.0197	106.64	104.87	106.89	0					89	46	4	0	0	0	0.638	1	11060	11060		40.058	8.4239	1	6259100	+		15917	29959	10896	10905	18389	18389					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3928833007812	2	648.393336	1294.77212	0.024154	1.5661E-05	-0.60517	-0.00039239	-0.58101	-0.00037672	648.3928433509174	107.73	1.0319	107.73	106.84	107.87	0					93	24	4	0	0	0	0.61824	3	11191	11143;11155;11191		42.338	5.9784	1	35129000	+		15918	29959	10896	10905	18390;18391;18392	18392					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3925170898438	2	648.393336	1294.77212	-0.0023386	-1.5163E-06	-0.87161	-0.00056515	-0.87395	-0.00056666	648.3926215212863	106.57	0.85555	106.54	106.01	106.87	-0.025146					71	19	4	0	0	0	0.69248	1	11577	11577		32.751	6.0576	1	19156000	+		15919	29959	10896	10905	18393	18393					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3927612304688	2	648.393336	1294.77212	-0.0023386	-1.5163E-06	-0.71325	-0.00046246	-0.71559	-0.00046398	648.3927201405174	107.38	1.0747	107.34	106.86	107.93	-0.034409					97	25	4	0	0	0	0.66009	2	11673	11661;11673		37.508	5.9784	1	36844000	+		15920	29959	10896	10905	18394;18395	18395					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3925170898438	2	648.393336	1294.77212	2.6473	0.0017165	-3.3608	-0.0021791	-0.7135	-0.00046263	648.3910621231973	107.28	1.1649	107.25	106.75	107.91	-0.034134					106	27	4	0	0	0	0.638	2	11936	11889;11936		40.058	19.246	1	42480000	+		15921	29959	10896	10905	18396;18397	18397					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.59771728515625	3	432.597983	1294.77212	2.4047	0.0010403	-3.2118	-0.0013894	-0.80705	-0.00034913	432.5965673542701	106.31	1.2824	106.34	105.87	107.15	0.03688					86	29	5	0	0	0	0.68532	1	11639	11639		43.419	18.293	1	16046000	+		15922	29959	10896	10905	18398	18398					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3926391601562	2	648.393336	1294.77212	1.8787	0.0012181	-2.609	-0.0016917	-0.73035	-0.00047355	648.3915145457087	107.1	1.2973	107.13	106.67	107.97	0.035622					111	30	4	0	0	0	0.66009	1	11819	11819		37.508	5.9784	1	42934000	+		15923	29959	10896	10905	18399	18399					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.59771728515625	3	432.597983	1294.77212	-1.5719	-0.00068002	0.90427	0.00039118	-0.66768	-0.00028884	432.5984109358272	105.99	1.0468	106.14	105.65	106.69	0.14843					117	25	6	0	0	0	0.74763	1	11317	11317		20.315	2.5935	1	44749000	+		15924	29959	10896	10905	18400	18400					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3928833007812	2	648.393336	1294.77212	1.6039	0.00104	-2.3204	-0.0015045	-0.71644	-0.00046454	648.3917432358439	106.08	2.1363	106.23	104.51	106.65	0.14843					114	53	4	0	0	0	0.69248	1	11328	11328		32.751	4.1738	1	52760000	+		15925	29959	10896	10905	18401	18401					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.392578125	2	648.393336	1294.77212	1.6039	0.00104	-2.236	-0.0014498	-0.63213	-0.00040987	648.3917676742469	106.97	1.0935	107.11	106.64	107.73	0.13866					101	26	4	0	0	0	0.69248	4	11436	11436;11472;11484;11496		32.751	6.0576	1	58516000	+		15926	29959	10896	10905	18402;18403;18404;18405	18402					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59765625	3	432.597983	1294.77212	0.73482	0.00031788	-1.4599	-0.00063157	-0.72512	-0.00031369	432.59735068529625	106.11	1.1677	106.21	105.57	106.74	0.099007					121	28	6	0	0	0	0.7144	1	11326	11326		38.714	26.782	1	31122000	+		15927	29959	10896	10905	18406	18406					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3932495117188	2	648.393336	1294.77212	0.94474	0.00061257	-1.779	-0.0011535	-0.83426	-0.00054093	648.3921194247092	106.15	2.119	106.24	104.58	106.7	0.099007					110	52	4	0	0	0	0.69248	1	11356	11356		32.751	7.1765	1	47497000	+		15928	29959	10896	10905	18407	18407					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3933715820312	2	648.393336	1294.77212	0.94475	0.00061257	-1.3677	-0.00088682	-0.42298	-0.00027426	648.3923298671006	107.11	0.98898	107.2	106.69	107.68	0.091255					92	23	4	0	0	0	0.70584	1	11501	11501		30.569	0.25114	1	51640000	+		15929	29959	10896	10905	18408	18408					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.392578125	2	648.393336	1294.77212	-1.1413	-0.00074	0.13726	8.8996E-05	-1.004	-0.000651	648.3933115061765	106.13	0.94215	106.19	105.71	106.65	0.053757					81	22	4	0	0	0	0.69248	1	11250	11250		32.751	4.669	1	40329000	+		15930	29959	10896	10905	18409	18409					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5977783203125	3	432.597983	1294.77212	-1.8326	-0.00079276	0.99264	0.00042942	-0.83992	-0.00036335	432.5983701682112	106.14	0.94881	106.2	105.74	106.69	0.053749					97	22	5	0	0	0	0.74763	1	11264	11264		25.892	6.2648	1	20584000	+		15931	29959	10896	10905	18410	18410					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3931274414062	2	648.393336	1294.77212	-1.1413	-0.00074001	0.67421	0.00043715	-0.46709	-0.00030286	648.3936534392657	107.12	0.99413	107.16	106.63	107.62	0.036118					92	23	4	0	0	0	0.69248	1	11463	11463		32.751	1.2207	1	53885000	+		15932	29959	10896	10905	18411	18411					0.13652414651232903
IEKLHKKNKAS	11	Unmodified	_IEKLHKKNKAS_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3953247070312	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.69248	1	12339	12339		32.751	4.8683	1	2297700	+		15933	29959	10896	10905	18412	18412					0.13652414651232903
IEKLHPATLMI	11	Unmodified	_IEKLHPATLMI_					0	0	0		ENST00000551270.1_1_12:104283206-104309165:-|nuORF;nc|ENSG00000214198|Q6P2S7-2|TTC41P;nc|ENSG00000214198|Q6P2S7|TTC41P	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3682861328125	2	633.367941	1264.72133	1.5977	0.0010119	0.2751	0.00017424	1.8728	0.0011861	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.62889	1	11764	11764		38.754	0	1	10012000			15934	13669	10897	10906	18413	18413					0.09955749282016768
IEKLKLESLVP	11	Unmodified	_IEKLKLESLVP_					0	0	0			REV__nc|ENSG00000117650|P51955-4|NEK2	REV__nc|ENSG00000117650|P51955-4|NEK2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8934326171875	2	634.894846	1267.77514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.49	1	107.53	107.03	108.03	0.036125								0	0	0	0.56276	1	11475	11475		19.997	0	1		+		15935	18275	10898	10907	18414	18414					0.1519624498534995
IEKLKRGHIN	10	Unmodified	_IEKLKRGHIN_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2470703125	3	403.247173	1206.71969	-0.18602	-7.5014E-05	-0.48244	-0.00019454	-0.66847	-0.00026956	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.85694	1	11521	11521		27.047	14.09	1	12308000	+		15936	18360	10899	10908	18415	18415					0.12459876308275852
IEKLKRGHIN	10	Unmodified	_IEKLKRGHIN_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2468566894531	3	403.247173	1206.71969	-1.7912	-0.0007223	1.0466	0.00042203	-0.74462	-0.00030027	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.8486	1	11089	11089		23.378	0	1	20673000	+		15937	18360	10899	10908	18416	18416					0.12459876308275852
IEKLKRGHIN	10	Unmodified	_IEKLKRGHIN_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3668212890625	2	604.367121	1206.71969	0.90452	0.00054666	-1.7748	-0.0010726	-0.87023	-0.00052594	604.3659698503843	107.87	0.75671	107.96	107.26	108.01	0.084412					57	18	4	0	0	0	0.37624	1	11522	11522		19.997	0	1	15864000	+		15938	18360	10899	10908	18417	18417					0.12459876308275852
IEKLKRGHIN	10	Unmodified	_IEKLKRGHIN_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3663940429688	2	604.367121	1206.71969	-1.2751	-0.0007706	0.20453	0.00012361	-1.0705	-0.00064699	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.86587	1	11096	11096		29.17	1.0886	1	103250000	+		15939	18360	10899	10908	18418	18418					0.12459876308275852
IEKLKRGHIN	10	Unmodified	_IEKLKRGHIN_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.365966796875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.82667	0.00049961	-0.44844	-0.00027102	604.3675622774762	107.87	0.68172	107.91	107.29	107.97	0.036125					51	16	4	0	0	0	0.82886	1	11490	11490		37.812	6.2817	1	15923000	+		15940	18360	10899	10908	18419	18419					0.12459876308275852
IEKLKYYGK	9	Unmodified	_IEKLKYYGK_					0	0	0		ENST00000520868.5_1_8:101715480-101715573:-|nuORF	ENST00000520868.5_1_8:101715480-101715573:-|nuORF	ENST00000520868.5_1_8:101715480-101715573:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.2550659179688	2	571.334424	1140.6543	0.378	0.00021596	-3.2578	-0.0018613	-2.8798	-0.0016453	571.3319779613769	72.175	1.1151	72.725	72.154	73.269	0.55008					53	26	3	0	0	0	0.20789	1	8123	8123		37.812	0	1	180240			15941	13163	10900	10909	18420	18420					0.08959462062557577
IEKLQEELHR	10	Unmodified	_IEKLQEELHR_					0	0	0			REV__ENSG00000198887|ENST00000361138|SMC5	REV__ENSG00000198887|ENST00000361138|SMC5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	647.2803344726562	2	647.859326	1293.7041	-1.0461	-0.00067776	-4.2956	-0.0027829	-5.3418	-0.0034607	647.8564231056768	58.812	0.50148	59.204	58.941	59.443	0.39209					27	11	3	0	0	0	0.37624	1	6150	6150		27.047	0	1	441000	+		15942	23404	10901	10910	18421	18421					0.06899545000555918
IEKLRHKEVN	10	Unmodified	_IEKLRHKEVN_					0	0	0		ENST00000358463.2_1_16:73161256-73177677:-|nuORF	ENST00000358463.2_1_16:73161256-73177677:-|nuORF	ENST00000358463.2_1_16:73161256-73177677:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.581787109375	3	422.582333	1264.72517	-1.0345	-0.00043717	0.2267	9.5799E-05	-0.80781	-0.00034137	422.582401446262	98.086	2.0202	98.086	97.162	99.182	0					111	48	3	0	0	0	0.8651	1	9893	9893		24.232	6.5103	1	144500			15943	10410	10902	10911	18422	18422					0.1033955510006308
IEKLRLLPIL	10	Unmodified	_IEKLRLLPIL_					0	0	0			REV__ENST00000555400.1_1_14:53521153-53527951:-|nuORF	REV__ENST00000555400.1_1_14:53521153-53527951:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3662719726562	2	604.410466	1206.80638	1.0459	0.00063216	-2.1946	-0.0013265	-1.1487	-0.0006943	604.4088657971824	104.17	0.11856	104.34	104.26	104.38	0.17096					4	2	2	0	0	0	0.37624	1	11046	11046		19.997	11.303	1	96132	+		15944	28682	10903	10912	18423	18423					0.21124862810142986
IEKLSLKSR	9	Unmodified	_IEKLSLKSR_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3270263671875	2	537.337498	1072.66044	0.056974	3.0614E-05	-4.4836	-0.0024092	-4.4266	-0.0023786	537.8351289661988	105.54	1.3217	105.7	104.52	105.84	0.15924					49	33	2	0	0	0	0.20789	1	11260	11260		36.447	4.9169	1	272380	+		15945	16117	10904	10913	18424	18424					0.12701980294104942
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.301736	1044.58892	-0.041394	-2.1661E-05	3.4629	0.0018121	3.4215	0.0017905	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.64922	3	8793	8557;8661;8793		44.117	2.4321	1	3850300			15946	13378;814	10905	10914	18425;18426;18427	18427					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.301736	1044.58892	-0.041207	-2.1563E-05	3.5312	0.0018479	3.49	0.0018263	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.74721	5	9117	8877;9117;9177;9225;9299		37.159	2.7563	1	12431000			15947	13378;814	10905	10914	18428;18429;18430;18431;18432	18429					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3037109375	2	523.301736	1044.58892	-0.041135	-2.1526E-05	3.7644	0.0019699	3.7232	0.0019484	523.30361738985	91.645	2.4487	91.714	91.431	93.88	0.06987					99	57	2	0	0	0	0.73802	1	9427	9427		37.812	3.639	1	1067500			15948	13378;814	10905	10914	18433	18433					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3035278320312	2	523.301736	1044.58892	1.4247	0.00074556	1.9478	0.0010193	3.3725	0.0017648	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.76255	1	9053	9053		35.618	6.4687	1	3882100			15949	13378;814	10905	10914	18434	18434					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3033447265625	2	523.301736	1044.58892	1.699	0.00088911	1.7632	0.00092271	3.4623	0.0018118	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.77244	3	9473	9340;9412;9473		32.812	1.2826	1	13080000			15950	13378;814	10905	10914	18435;18436;18437	18437					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3034057617188	2	523.301736	1044.58892	1.0264	0.00053713	2.344	0.0012266	3.3704	0.0017638	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.69624	4	8843	8783;8843;8892;8916		40.778	5.1599	1	3817300			15951	13378;814	10905	10914	18438;18439;18440;18441	18439					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3033447265625	2	523.301736	1044.58892	1.1688	0.00061163	2.3066	0.0012071	3.4754	0.0018187	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.69624	5	9275	8953;9108;9143;9275;9452		40.778	5.1599	1	12580000			15952	13378;814	10905	10914	18442;18443;18444;18445;18446	18445					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3037109375	2	523.301736	1044.58892	1.2403	0.00064907	2.4762	0.0012958	3.7166	0.0019449	523.302929168532	91.415	2.5669	91.46	91.141	93.708	0.045448					111	60	2	0	0	0	0.76255	1	9547	9547		35.618	0	1	1018700			15953	13378;814	10905	10914	18447	18447					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3038330078125	2	523.301736	1044.58892	-0.178	-9.3149E-05	3.4267	0.0017932	3.2487	0.0017	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.7932	1	8312	8312		26.693	0	1	4158500			15954	13378;814	10905	10914	18448	18448					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.30322265625	2	523.301736	1044.58892	-0.1734	-9.0741E-05	3.5089	0.0018362	3.3355	0.0017455	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.76255	4	8848	8812;8848;8920;8944		35.618	0	1	13808000			15955	13378;814	10905	10914	18449;18450;18451;18452	18450					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.301736	1044.58892	0.69703	0.00036476	2.6051	0.0013632	3.3021	0.001728	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.73802	4	8618	8406;8428;8535;8618		37.812	4.9991	1	3801600			15956	13378;814	10905	10914	18453;18454;18455;18456	18456					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3036499023438	2	523.301736	1044.58892	0.71899	0.00037625	2.71	0.0014182	3.429	0.0017944	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.55097	5	9027	9003;9027;9137;9161;9173		49.442	13.823	1	13442000			15957	13378;814	10905	10914	18457;18458;18459;18460;18461	18458					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3029174804688	2	523.301736	1044.58892	0.60955	0.00031898	2.9734	0.001556	3.583	0.001875	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.77244	4	10047	10047;10094;10178;10192		32.812	4.9302	1	4023800			15958	13378;814	10905	10914	18462;18463;18464;18465	18462					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3035888671875	2	523.301736	1044.58892	1.1935	0.00062456	2.3787	0.0012448	3.5722	0.0018693	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.67345	2	10549	10549;10808		42.396	8.8806	1	11944000			15959	13378;814	10905	10914	18466;18467	18466					0.06840724545213561
IEKLVELCV	9	Unmodified	_IEKLVELCV_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENST00000532469.1_1_11:65029724-65047127:+|nuORF;ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3036499023438	2	523.301736	1044.58892	-0.50611	-0.00026485	3.9552	0.0020698	3.4491	0.0018049	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.69624	1	10181	10181		40.778	5.1599	1	3970100			15960	13378;814	10905	10914	18468	18468					0.06840724545213561
IEKLWQTFWRY	11	Unmodified	_IEKLWQTFWRY_					0	0	0		ENSG00000080298|ENST00000617270|RFX3;nc|ENSG00000080298|P48380-2|RFX3;nc|ENSG00000080298|P48380-3|RFX3	ENSG00000080298|ENST00000617270|RFX3	ENSG00000080298|ENST00000617270|RFX3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7999267578125	3	523.945271	1568.81398	-0.28837	-0.00015109	-3.8425	-0.0020132	-4.1308	-0.0021643	524.2780307773754	54.209	0.25059	54.794	54.708	54.959	0.58474					7	5	2	0	0	0	0.18276	1	5550	5550		2.688	1.2693	1	107310			15961	1438	10906	10915	18469	18469					0.05232970339716303
IEKNKLIEF	9	Unmodified	_IEKNKLIEF_					0	0	0			REV__nc|ENSG00000276141|Q1A5X7-2|WHAMMP3	REV__nc|ENSG00000276141|Q1A5X7-2|WHAMMP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.329345703125	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.77244	1	9669	9669		32.812	1.2826	1	15673000	+		15962	30268	10907	10916	18470	18470					0.0881915819995811
IEKNKLIEF	9	Unmodified	_IEKNKLIEF_					0	0	0			REV__nc|ENSG00000276141|Q1A5X7-2|WHAMMP3	REV__nc|ENSG00000276141|Q1A5X7-2|WHAMMP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3294677734375	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.69624	1	9401	9401		40.778	5.6261	1	18558000	+		15963	30268	10907	10916	18471	18471					0.0881915819995811
IEKNKLIEF	9	Unmodified	_IEKNKLIEF_					0	0	0			REV__nc|ENSG00000276141|Q1A5X7-2|WHAMMP3	REV__nc|ENSG00000276141|Q1A5X7-2|WHAMMP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3301391601562	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.77696	1	11062	11062		31.53	1.0262	1	6007000	+		15964	30268	10907	10916	18472	18472					0.0881915819995811
IEKNLFKIA	9	Unmodified	_IEKNLFKIA_					0	0	0			REV__nc|ENSG00000115211|Q9UI10-3|EIF2B4	REV__nc|ENSG00000115211|Q9UI10-3|EIF2B4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3262329101562	2	538.329142	1074.64373	0.070633	3.8024E-05	-4.4231	-0.0023811	-4.3525	-0.0023431	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.7932	1	10942	10942		21.96	1.013	1	109840000	+		15965	18093	10908	10917	18473	18473					0.10939479408148145
IEKNLFKIA	9	Unmodified	_IEKNLFKIA_					0	0	0			REV__nc|ENSG00000115211|Q9UI10-3|EIF2B4	REV__nc|ENSG00000115211|Q9UI10-3|EIF2B4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.326416015625	2	538.329142	1074.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.35	1	103.48	102.98	103.98	0.12622								0	0	0	0.28772	1	10926	10926		35.618	6.4482	1		+		15966	18093	10908	10917	18474	18474					0.10939479408148145
IEKNLFKIA	9	Unmodified	_IEKNLFKIA_					0	0	0			REV__nc|ENSG00000115211|Q9UI10-3|EIF2B4	REV__nc|ENSG00000115211|Q9UI10-3|EIF2B4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3269653320312	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12356	12356		20.947	4.4738	1	4041000	+		15967	18093	10908	10917	18475	18475					0.10939479408148145
IEKNRGKRRR	10	Unmodified	_IEKNRGKRRR_					0	0	0			REV__ENSG00000182768|ENST00000379095|NGRN	REV__ENSG00000182768|ENST00000379095|NGRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.27288818359375	3	438.272604	1311.79598	0.73903	0.0003239	-0.015211	-6.6666E-06	0.72382	0.00031723	438.2725101796097	107.07	1.2292	107.16	106.69	107.92	0.091255					130	29	5	0	0	0	0.8583	1	11472	11472		22.562	0	1	4759800	+		15968	22547	10909	10918	18476	18476					0.15255692928258213
IEKPPKIPP	9	Unmodified	_IEKPPKIPP_					0	0	0			REV__nc|ENSG00000153132|O14967-2|CLGN	REV__nc|ENSG00000153132|O14967-2|CLGN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8036193847656	2	509.81841	1017.62227	1.1962	0.00060983	-0.50455	-0.00025723	0.69162	0.0003526	510.32008278940464	86.485	0.20976	86.411	86.27	86.48	-0.073761					5	4	2	0	0	0	0.20789	1	8902	8902		20.947	0	1	26563	+		15969	20332	10910	10919	18477	18477					0.11416094379421793
IEKPPKIPP	9	Unmodified	_IEKPPKIPP_					0	0	0			REV__nc|ENSG00000153132|O14967-2|CLGN	REV__nc|ENSG00000153132|O14967-2|CLGN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8036193847656	2	509.81841	1017.62227	0.69943	0.00035658	2.3727	0.0012096	3.0721	0.0015662	509.81933663529315	88.899	2.4886	89.05	87.252	89.741	0.15055					90	58	2	0	0	0	0.20789	1	8599	8599		40.778	16.575	1	47587	+		15970	20332	10910	10919	18478	18478					0.11416094379421793
IEKPPKIPP	9	Unmodified	_IEKPPKIPP_					0	0	0			REV__nc|ENSG00000153132|O14967-2|CLGN	REV__nc|ENSG00000153132|O14967-2|CLGN	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	509.81841	1017.62227	-0.37358	-0.00019046	4.701	0.0023967	4.3275	0.0022062	510.32275312305677	88.67	1.0815	88.877	88.431	89.513	0.20731	-0.086518	0.0014077	NaN	40.778	40	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53644	+		15971	20332	10910	10919							0.11416094379421793
IEKPVAVS	8	Unmodified	_IEKPVAVS_					0	0	0		ENST00000487998.5_1_10:92631743-92654759:+|nuORF;ENSG00000148688|ENST00000371703|RPP30;nc|ENSG00000148688|P78346-2|RPP30	ENST00000487998.5_1_10:92631743-92654759:+|nuORF	ENST00000487998.5_1_10:92631743-92654759:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.75140380859375	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.89043	1	7551	7551		35.618	0	1	579450			15972	4977	10911	10920	18479	18479					0.06383284011531032
IEKPVVPDKKL	11	Unmodified	_IEKPVVPDKKL_					0	0	0			REV__ENSG00000282815|ENST00000695840|TEX13C	REV__ENSG00000282815|ENST00000695840|TEX13C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3692626953125	2	633.395013	1264.77547	0.90566	0.00057364	3.0242	0.0019155	3.9298	0.0024891	633.3976324877517	97.796	0.22005	97.957	97.84	98.06	0.16074					5	4	2	0	0	0	0.17305	1	10141	10141		30.569	11.465	1	18592	+		15973	24051	10912	10921	18480	18480					0.15367664705217976
IEKQKLVYI	9	Unmodified	_IEKQKLVYI_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3300170898438	2	567.350074	1132.6856	-1.3957	-0.00079188	-2.4314	-0.0013795	-3.8272	-0.0021713	567.3483044573978	92.564	0.81093	92.756	91.966	92.777	0.19239					33	18	2	0	0	0	0.20789	1	9309	9309		26.693	0	1	155920			15974	7987	10913	10922	18481	18481					0.12456035096670348
IEKRQTLPRP	10	Unmodified	_IEKRQTLPRP_					0	0	0			REV__ENSG00000107771|ENST00000372088|CCSER2	REV__ENSG00000107771|ENST00000372088|CCSER2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.3762817382812	2	619.372404	1236.73025	-0.10661	-6.6034E-05	-0.5997	-0.00037144	-0.70632	-0.00043747	619.3719649656875	101.89	1.4654	101.89	101.45	102.91	0					98	36	4	0	0	0	0.8651	1	10351	10351		25.574	2.0514	1	1989800	+		15975	17673	10914	10923	18482	18482					0.12135858962687962
IEKRTSLDVPK	11	Unmodified	_IEKRTSLDVPK_					0	0	0			REV__ENSG00000153201|ENST00000283195|RANBP2	REV__ENSG00000153201|ENST00000283195|RANBP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.405517578125	2	643.377352	1284.74015	1.6038	0.0010319	3.5671	0.002295	5.1709	0.0033269	643.3795438948497	105.41	0.57214	105.57	105.09	105.66	0.15924					20	14	3	0	0	0	0.17415	1	11193	11193		20.837	0	1	138180	+		15976	20336	10915	10924	18483	18483					0.1091700217741618
IEKSDKFDIL	10	Unmodified	_IEKSDKFDIL_					0	0	0		nc|ENSG00000156535|Q6YHK3-2|CD109;nc|ENSG00000156535|Q6YHK3-4|CD109;ENSG00000156535|ENST00000287097|CD109	nc|ENSG00000156535|Q6YHK3-2|CD109	nc|ENSG00000156535|Q6YHK3-2|CD109	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3663940429688	2	604.332079	1206.6496	3.2066	0.0019379	2.956	0.0017864	6.1626	0.0037243	604.3331840994774	104.98	0.63638	104.94	104.77	105.41	-0.040382					21	14	2	0	0	0	0.37624	1	11582	11582		28.081	2.5074	1	185480			15977	5381	10916	10925	18484	18484					0.05454533129136507
IEKSSLVIL	9	Unmodified	_IEKSSLVIL_					0	0	0		ENST00000476742.1_1_3:132424565-132434018:-|nuORF;nc|ENSG00000113971|Q7Z494-3|NPHP3;nc|ENSG00000113971|Q7Z494-6|NPHP3;ENSG00000113971|ENST00000337331|NPHP3	ENST00000476742.1_1_3:132424565-132434018:-|nuORF	ENST00000476742.1_1_3:132424565-132434018:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2901611328125	2	501.3157	1000.61685	-1.5665	-0.00078533	1.4472	0.00072549	-0.11936	-5.9837E-05	501.31583960317147	86.681	0.34619	86.846	86.651	86.998	0.16473					10	7	2	0	0	0	0.20789	1	8469	8469		21.96	0	1	78397			15978	2755	10917	10926	18485	18485					0.11656370796947613
IEKSVSEAL	9	Unmodified	_IEKSVSEAL_					0	0	0		ENSG00000271601|ENST00000604000|LIX1L	ENSG00000271601|ENST00000604000|LIX1L	ENSG00000271601|ENST00000604000|LIX1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.2720031738281	2	488.27149	974.528426	-1.2335	-0.00060228	0.89838	0.00043865	-0.33512	-0.00016363	488.27182581554416	38.982	0.94675	39.536	39.236	40.183	0.55449					39	21	2	0	0	0	0.26953	1	3255	3255		67.494	3.2864	1	335620			15979	8980	10918	10927	18486	18486					0.0401433048649551
IEKTEKNKN	9	Unmodified	_IEKTEKNKN_					0	0	0		ENSG00000172967|ENST00000684488|XKR3	ENSG00000172967|ENST00000684488|XKR3	ENSG00000172967|ENST00000684488|XKR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.305908203125	2	552.306395	1102.59824	-1.4446	-0.00079788	1.6112	0.00088988	0.16659	9.2009E-05	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.75725	1	9384	9384		36.447	0	1	1677300			15980	6810	10919	10928	18487	18487					0.05104209155092576
IEKVFKGRFK	10	Unmodified	_IEKVFKGRFK_					0	0	0		nc|ENSG00000137872|Q8NFY4-7|SEMA6D;nc|ENSG00000137872|Q8NFY4-8|SEMA6D;nc|ENSG00000137872|Q8NFY4-3|SEMA6D;nc|ENSG00000137872|Q8NFY4-2|SEMA6D;nc|ENSG00000137872|Q8NFY4-4|SEMA6D;nc|ENSG00000137872|Q8NFY4-5|SEMA6D;nc|ENSG00000137872|Q8NFY4-6|SEMA6D;ENSG00000137872|ENST00000536845|SEMA6D	nc|ENSG00000137872|Q8NFY4-7|SEMA6D	nc|ENSG00000137872|Q8NFY4-7|SEMA6D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.9224853515625	3	417.923919	1250.74993	-1.8945	-0.00079175	-2.0551	-0.00085887	-3.9496	-0.0016506	417.92301973502657	105.61	2.7753	105.68	104.89	107.66	0.073112					226	67	4	0	0	0	0.8486	1	11274	11274		17.833	3.7471	1	18308000			15981	4243	10920	10929	18488	18488					0.1345823497345009
IEKVIKHREN	10	Unmodified	_IEKVIKHREN_					0	0	0			REV__ENSG00000111335|ENST00000392583|OAS2	REV__ENSG00000111335|ENST00000392583|OAS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3690795898438	2	633.369861	1264.72517	-0.087569	-5.5464E-05	-0.98413	-0.00062332	-1.0717	-0.00067878	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.85981	1	9778	9778		35.152	1.2304	1	7059800	+		15982	17867	10921	10930	18489	18489					0.10339555100108555
IEKVIKHREN	10	Unmodified	_IEKVIKHREN_					0	0	0			REV__ENSG00000111335|ENST00000392583|OAS2	REV__ENSG00000111335|ENST00000392583|OAS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.368896484375	2	633.369861	1264.72517	1.4714	0.00093196	-2.6119	-0.0016543	-1.1404	-0.0007223	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.86195	1	10156	10156		28.081	0	1	11430000	+		15983	17867	10921	10930	18490	18490					0.10339555100108555
IEKVLLKRGW	10	Unmodified	_IEKVLLKRGW_					0	0	0		ENST00000478282.1_1_21:44514579-44514991:-|nuORF	ENST00000478282.1_1_21:44514579-44514991:-|nuORF	ENST00000478282.1_1_21:44514579-44514991:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3926391601562	2	621.390065	1240.76558	-0.078753	-4.8936E-05	4.3785	0.0027208	4.2997	0.0026718	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.6116	1	10785	10785		49.442	10.688	1	10411000			15984	12383	10922	10931	18491	18491					0.1548252149052587
IEKVLLKRGW	10	Unmodified	_IEKVLLKRGW_					0	0	0		ENST00000478282.1_1_21:44514579-44514991:-|nuORF	ENST00000478282.1_1_21:44514579-44514991:-|nuORF	ENST00000478282.1_1_21:44514579-44514991:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3929443359375	2	621.390065	1240.76558	2.9766	0.0018496	1.2761	0.00079293	4.2527	0.0026426	621.3907359645153	104.71	2.7313	104.66	104.1	106.83	-0.04039					247	64	5	0	0	0	0.77314	1	11470	11470		40.778	7.9657	1	12926000			15985	12383	10922	10931	18492	18492					0.1548252149052587
IEKVLLKRGW	10	Unmodified	_IEKVLLKRGW_					0	0	0		ENST00000478282.1_1_21:44514579-44514991:-|nuORF	ENST00000478282.1_1_21:44514579-44514991:-|nuORF	ENST00000478282.1_1_21:44514579-44514991:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3928833007812	2	621.390065	1240.76558	0.69841	0.00043398	3.6119	0.0022444	4.3103	0.0026784	621.3922056168815	104.57	2.6797	104.61	104.09	106.77	0.039856					250	63	5	0	0	0	0.86348	2	11412	11412;11424		31.53	2.3598	1	13976000			15986	12383	10922	10931	18493;18494	18493					0.1548252149052587
IEKVQRVSS	9	Unmodified	_IEKVQRVSS_					0	0	0			REV__ENSG00000087095|ENST00000407008|NLK	REV__ENSG00000087095|ENST00000407008|NLK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3037719726562	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.78124	1	9230	9230		30.318	1.1682	1	13442000	+		15987	16923	10923	10932	18495	18495					0.07224530363305348
IELACLMI	8	Carbamidomethyl (C)	_IELAC(Carbamidomethyl (C))LMI_	IELAC(1)LMI		IELAC(47)LMI		0	1	0			REV__ENST00000389010.7_1_4:79800122-79800278:+|nuORF	REV__ENST00000389010.7_1_4:79800122-79800278:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.7557678222656	2	481.756107	961.49766	-0.58942	-0.00028396	1.5732	0.00075792	0.98382	0.00047396	481.75665787402625	57.408	0.79066	57.392	57.106	57.897	-0.01643					68	40	2	0	0	0	0.92176	1	4871	4871		46.766	9.738	1	310440	+		15988	25992	10924	10933	18496	18496	316				0.015371375762356365
IELATLVTP	9	Unmodified	_IELATLVTP_					0	0	0			REV__ENSG00000163029|ENST00000448223|SMC6	REV__ENSG00000163029|ENST00000448223|SMC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.7855224609375	2	478.786776	955.558998	-0.42495	-0.00020346	-2.1658	-0.001037	-2.5908	-0.0012404	478.78545742505617	92.153	2.1454	92.198	91.261	93.406	0.045448					108	50	4	0	0	0	0.72402	1	9620	9620		38.806	6.8513	1	799270	+		15989	20874	10925	10934	18497	18497					0.07944108871538447
IELCHHAN	8	Unmodified	_IELCHHAN_					0	0	0			REV__ENSG00000138081|ENST00000403359|FBXO11	REV__ENSG00000138081|ENST00000403359|FBXO11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.2443542480469	2	468.721444	935.428335	1.6081	0.00075375	2.6104	0.0012236	4.2185	0.0019773	468.72252929666683	105.21	1.2674	105.36	104.86	106.13	0.15584					62	33	3	0	0	0	0.4196	1	12791	12791		17.365	10.629	1	836880	+		15990	19438	10926	10935	18498	18498					-0.041961853283282835
IELFEDSQLTT	11	Unmodified	_IELFEDSQLTT_					0	0	0		nc|ENSG00000134283|Q8NEY8-7|PPHLN1;ENST00000547440.1_1_12:42781241-42792805:+|nuORF;nc|ENSG00000134283|Q8NEY8-5|PPHLN1;ENST00000552202.5_1_12:42726503-42792805:+|nuORF;nc|ENSG00000134283|Q8NEY8-6|PPHLN1;nc|ENSG00000134283|Q8NEY8-9|PPHLN1;ENSG00000134283|ENST00000358314|PPHLN1;nc|ENSG00000134283|Q8NEY8-2|PPHLN1;nc|ENSG00000134283|Q8NEY8-3|PPHLN1;nc|ENSG00000134283|Q8NEY8|PPHLN1	nc|ENSG00000134283|Q8NEY8-7|PPHLN1	nc|ENSG00000134283|Q8NEY8-7|PPHLN1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3928833007812	2	648.321908	1294.62926	-1.1409	-0.00073968	-2.5345	-0.0016432	-3.6754	-0.0023828	648.3202837265252	107.12	0.56468	107.16	107.06	107.62	0.036125					18	13	2	0	0	0	0.17574	1	11474	11474		58.23	39.126	1	252130			15991	3924	10927	10936	18499	18499					-0.006266823213536554
IELFNSSSY	9	Unmodified	_IELFNSSSY_					0	0	0		ENST00000506712.1_1_5:32710768-32783175:+|nuORF;nc|ENSG00000113389|P17342-3|NPR3;nc|ENSG00000113389|P17342-2|NPR3;ENSG00000113389|ENST00000265074|NPR3	ENST00000506712.1_1_5:32710768-32783175:+|nuORF	ENST00000506712.1_1_5:32710768-32783175:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2529907226562	2	530.253297	1058.49204	-1.0706	-0.00056768	1.0079	0.00053445	-0.062667	-3.3229E-05	530.2536993167932	67.979	0.99502	67.979	67.627	68.622	0					70	39	2	0	0	0	0.21969	1	6036	6036		71.877	13.096	1	821190			15992	2721	10928	10937	18500	18500					-0.03486546410226765
IELGMLLKEL	10	Unmodified	_IELGMLLKEL_					0	0	0			REV__ENST00000520885.1_1_8:142136488-142138179:-|nuORF	REV__ENST00000520885.1_1_8:142136488-142138179:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	579.8433837890625	2	579.843768	1157.67298	0.68543	0.00039744	-0.12299	-7.1317E-05	0.56244	0.00032613	579.8435684562951	102.05	1.3312	102.24	101.84	103.17	0.19483					96	32	4	0	0	0	0.86763	1	10766	10766		26.693	0	1	2191200	+		15993	28055	10929	10938	18501	18501					0.10045255642125994
IELGMLLKEL	10	Unmodified	_IELGMLLKEL_					0	0	0			REV__ENST00000520885.1_1_8:142136488-142138179:-|nuORF	REV__ENST00000520885.1_1_8:142136488-142138179:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	579.8442993164062	2	579.843768	1157.67298	-1.355	-0.00078567	1.8534	0.0010747	0.49843	0.00028901	579.8447437223629	102.17	1.0869	102.31	101.93	103.02	0.13569					79	26	4	0	0	0	0.86589	1	10744	10744		29.15	1.0681	1	2038000	+		15994	28055	10929	10938	18502	18502					0.10045255642125994
IELIVPWIM	9	Unmodified	_IELIVPWIM_					0	0	0			REV__ENST00000370812.7_2_1:77634988-77635063:-|nuORF	REV__ENST00000370812.7_2_1:77634988-77635063:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.82421875	2	557.322471	1112.63039	-0.44428	-0.00024761	0.27667	0.0001542	-0.16761	-9.3411E-05	557.322590609542	27.911	0.52702	27.947	27.696	28.223	0.03607					27	18	2	0	0	0	0.76996	1	1298	1298		33.516	0.70317	1	54882	+		15995	25669	10930	10939	18503	18503					0.07857905304535961
IELKGRSKT	9	Unmodified	_IELKGRSKT_					0	0	0		ENST00000433017.5_1_7:50515911-50516925:-|nuORF	ENST00000433017.5_1_7:50515911-50516925:-|nuORF	ENST00000433017.5_1_7:50515911-50516925:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3140869140625	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12648	12648		19.104	0.77911	1	4038100			15996	11677	10931	10940	18504	18504					0.0994112074295117
IELLGAAVP	9	Unmodified	_IELLGAAVP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7682189941406	2	441.768386	881.522219	1.5192	0.00067115	-2.2878	-0.0010107	-0.76859	-0.00033954	441.7673408334102	107.1	1.0458	107.2	106.82	107.87	0.10395					97	38	4	0	0	0	0.76996	1	13084	13084		33.516	3.0119	1	2679600	+		15997	16141	10932	10941	18505	18505					0.07671857045613706
IELLGVGV	8	Unmodified	_IELLGVGV_					0	0	0		ENST00000349155.6_3_12:115109215-115109560:-|nuORF	ENST00000349155.6_3_12:115109215-115109560:-|nuORF	ENST00000349155.6_3_12:115109215-115109560:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.2488708496094	2	400.249829	798.485105	0.55585	0.00022248	-2.9993	-0.0012005	-2.4435	-0.00097801	400.2484529763441	24.6	0.84744	24.655	24.318	25.165	0.055025					44	24	3	0	0	0	0.89457	1	927	927		37.028	7.1869	1	85580			15998	10318	10933	10942	18506	18506					0.07780185499871095
IELLKELMD	9	Unmodified	_IELLKELMD_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3056030273438	2	552.304475	1102.5944	1.2817	0.0007079	2.1506	0.0011878	3.4323	0.0018957	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.73802	1	9759	9759		37.812	2.1932	1	1712700			15999	8298	10934	10943	18507	18507					0.047204033370235265
IELLSFNSP	9	Unmodified	_IELLSFNSP_					0	0	0			REV__ENST00000381477.7_1_9:5908925-5909063:+|nuORF	REV__ENST00000381477.7_1_9:5908925-5909063:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.311767578125	2	510.274032	1018.53351	0.62164	0.00031721	-0.8576	-0.00043761	-0.23596	-0.0001204	510.2735661198925	72.733	0.57753	73.287	72.943	73.52	0.55386					21	13	2	0	0	0	0.20789	1	8159	8159		58.782	0	1	219210	+		16000	25967	10935	10944	18508	18508					0.024986343491036678
IELMVDRYLDK	11	Unmodified	_IELMVDRYLDK_					0	0	0			REV__ENSG00000256087|ENST00000221315|ZNF432	REV__ENSG00000256087|ENST00000221315|ZNF432	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.5855712890625	3	465.583122	1393.72754	0.2075	9.6607E-05	2.419	0.0011263	2.6265	0.0012229	465.5842362867719	38.49	0.71319	38.584	38.211	38.924	0.094322					46	23	3	0	0	0	0.73277	1	2305	2305		25.892	5.0546	1	215500	+		16001	23904	10936	10945	18509	18509					0.04642222722873157
IELPTTGLPL	10	Unmodified	_IELPTTGLPL_					0	0	0		nc|ENSG00000106799|P36897-3|TGFBR1	nc|ENSG00000106799|P36897-3|TGFBR1	nc|ENSG00000106799|P36897-3|TGFBR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.8345947265625	2	527.313158	1052.61176	-0.44227	-0.00023322	-1.8675	-0.00098475	-2.3098	-0.001218	527.311837903967	30.082	0.48476	30.111	29.833	30.318	0.028618					19	10	3	0	0	0	0.37624	1	1905	1905		37.159	19.794	1	140190			16002	14834	10937	10946	18510	18510					0.08756066934324735
IELVKLATHL	10	Unmodified	_IELVKLATHL_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8538208007812	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.86348	1	10600	10600		31.53	2.3803	1	34546000	+		16003	20128	10938	10947	18511	18511					0.1340743747093711
IELVKLATHL	10	Unmodified	_IELVKLATHL_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.853759765625	2	568.855524	1135.69649	0.52236	0.00029715	-3.7145	-0.002113	-3.1922	-0.0018159	568.8533212672112	105.33	0.92152	105.49	105	105.92	0.15924					76	23	4	0	0	0	0.37624	1	11158	11158		39.253	5.0803	1	794810	+		16004	20128	10938	10947	18512	18512					0.1340743747093711
IELVKLATHL	10	Unmodified	_IELVKLATHL_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8531494140625	2	568.855524	1135.69649	-1.3907	-0.00079112	-2.9165	-0.001659	-4.3072	-0.0024502	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.67571	1	10688	10688		45.972	1.8554	1	72465000	+		16005	20128	10938	10947	18513	18513					0.1340743747093711
IELVKLATHL	10	Unmodified	_IELVKLATHL_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	568.855524	1135.69649	-1.1652	-0.00066281	-2.189	-0.0012452	-3.3542	-0.001908	568.8541663831269	105.84	1.6437	105.82	105.36	107	-0.025146	0.064195	0.0017336	NaN	39.253	74	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	513180	+		16006	20128	10938	10947							0.1340743747093711
IELVKLATHL	10	Unmodified	_IELVKLATHL_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	568.855524	1135.69649	2.8908	0.0016444	-6.2491	-0.0035549	-3.3583	-0.0019104	568.8518598032688	105.85	1.8212	105.82	105.19	107.01	-0.03714	0.061306	-0.0028857	NaN	39.253	101	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	594810	+		16007	20128	10938	10947							0.1340743747093711
IELVKLATHL	10	Unmodified	_IELVKLATHL_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	568.855524	1135.69649	1.5196	0.00086445	-4.7595	-0.0027075	-3.2399	-0.001843	568.8527184577074	105.62	1.5983	105.66	105.12	106.72	0.038322	-0.095301	-0.0011909	NaN	39.253	105	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	603310	+		16008	20128	10938	10947							0.1340743747093711
IELVKLATHL	10	Unmodified	_IELVKLATHL_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	568.855524	1135.69649	0.86996	0.00049488	-4.1092	-0.0023376	-3.2393	-0.0018427	568.853067407703	105.78	1.5931	105.87	105.06	106.65	0.099007	0.12085	-0.0004511	NaN	39.253	109	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	881520	+		16009	20128	10938	10947							0.1340743747093711
IELVKLATHL	10	Unmodified	_IELVKLATHL_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	568.855524	1135.69649	-1.3908	-0.00079114	-1.7943	-0.0010207	-3.185	-0.0018118	568.8543941080981	105.56	1.5285	105.63	105.09	106.62	0.073112	-0.12405	0.0021827	NaN	39.253	74	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	676060	+		16010	20128	10938	10947							0.1340743747093711
IELWKTRPT	9	Unmodified	_IELWKTRPT_					0	0	0			REV__ENST00000256383.8_1_14:67852590-67852770:+|nuORF	REV__ENST00000256383.8_1_14:67852590-67852770:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.331787109375	2	572.329673	1142.64479	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.79	1	58.877	58.377	59.377	0.087002								0	0	0	0.28772	1	5011	5011		35.618	2.8059	1		+		16011	24324	10939	10948	18514	18514					0.07917693777039858
IELYKQIKLWL	11	Unmodified	_IELYKQIKLWL_					0	0	0			REV__ENSG00000203697|ENST00000366872|CAPN8	REV__ENSG00000203697|ENST00000366872|CAPN8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	482.961181640625	3	482.962151	1445.86462	-0.29426	-0.00014212	-4.1572	-0.0020078	-4.4515	-0.0021499	482.9600875904296	19.335	0.55227	19.262	19.026	19.579	-0.073704					31	14	3	0	0	0	0.76892	1	411	411		17.833	4.3252	1	47743	+		16012	23436	10940	10949	18515	18515					0.1595249966476331
IENDCIQDFM	10	Unmodified	_IENDCIQDFM_					0	0	0		ENSG00000146918|ENST00000356309|NCAPG2;nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000467785.5_1_7:158448006-158486027:-|nuORF	ENSG00000146918|ENST00000356309|NCAPG2	ENSG00000146918|ENST00000356309|NCAPG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	613.801025390625	2	614.254656	1226.49476	0.46297	0.00028438	3.5042	0.0021525	3.9672	0.0024369	614.256632312337	53.135	0.70173	53.549	53.25	53.951	0.4139					32	16	3	0	0	0	0.37624	1	5401	5401		32.812	17.948	1	673360			16013	4870	10941	10950	18516	18516					-0.1094278233924797
IENDCIQDFM	10	Unmodified	_IENDCIQDFM_					0	0	0		ENSG00000146918|ENST00000356309|NCAPG2;nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000467785.5_1_7:158448006-158486027:-|nuORF	ENSG00000146918|ENST00000356309|NCAPG2	ENSG00000146918|ENST00000356309|NCAPG2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	614.254656	1226.49476	0.22011	0.0001352	3.467	0.0021296	3.6871	0.0022648	614.2567363361213	52.897	0.57756	53.511	53.241	53.819	0.61436	-0.018913	-2.4996E-05	NaN	32.812	34	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	635340			16014	4870	10941	10950							-0.1094278233924797
IENICACGKC	10	Unmodified	_IENICACGKC_					0	0	0		nc|ENSG00000126804|Q9Y2K1-2|ZBTB1;ENSG00000126804|ENST00000683701|ZBTB1	nc|ENSG00000126804|Q9Y2K1-2|ZBTB1	nc|ENSG00000126804|Q9Y2K1-2|ZBTB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.228759765625	2	527.22993	1052.44531	0.15164	7.995E-05	-1.2477	-0.00065783	-1.0961	-0.00057788	527.2292357505893	19.527	0.46033	19.454	19.263	19.724	-0.073702					17	12	2	0	0	0	0.73395	1	431	431		42.864	5.0528	1	33525			16015	3471	10942	10951	18517	18517					-0.07881768829020075
IENPALLRW	9	Unmodified	_IENPALLRW_					0	0	0		nc|ENSG00000065518|O95168-2|NDUFB4;ENSG00000065518|ENST00000184266|NDUFB4	nc|ENSG00000065518|O95168-2|NDUFB4	nc|ENSG00000065518|O95168-2|NDUFB4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.31640625	2	556.316566	1110.61858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.751	1	70.784	70.284	71.284	0.032875								0	0	0	0.28223	1	6689	6689		37.812	0	1				16016	1131	10943	10952	18518	18518					0.0676942460556802
IENPALLRW	9	Unmodified	_IENPALLRW_					0	0	0		nc|ENSG00000065518|O95168-2|NDUFB4;ENSG00000065518|ENST00000184266|NDUFB4	nc|ENSG00000065518|O95168-2|NDUFB4	nc|ENSG00000065518|O95168-2|NDUFB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	556.3160400390625	2	556.316566	1110.61858	-0.35642	-0.00019828	0.46255	0.00025733	0.10613	5.9041E-05	556.3166895811578	70.554	0.42314	70.516	70.392	70.815	-0.037857					36	22	2	0	0	0	0.18338	3	6859	6844;6847;6859		77.318	0	1	122490			16017	1131	10943	10952	18519;18520;18521	18521					0.0676942460556802
IENPALLRW	9	Unmodified	_IENPALLRW_					0	0	0		nc|ENSG00000065518|O95168-2|NDUFB4;ENSG00000065518|ENST00000184266|NDUFB4	nc|ENSG00000065518|O95168-2|NDUFB4	nc|ENSG00000065518|O95168-2|NDUFB4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	556.316566	1110.61858	0.12016	6.6845E-05	0.15931	8.8626E-05	0.27947	0.00015547	556.316338671157	70.549	0.36956	70.587	70.367	70.736	0.038055	0.035524	-0.00021932	NaN	77.318	24	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	167420			16018	1131	10943	10952							0.0676942460556802
IEPADAHVL	9	Unmodified	_IEPADAHVL_					0	0	0		nc|ENSG00000121579|Q9GZZ1-2|NAA50;ENSG00000121579|ENST00000240922|NAA50	nc|ENSG00000121579|Q9GZZ1-2|NAA50	nc|ENSG00000121579|Q9GZZ1-2|NAA50	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.75872802734375	2	482.758549	963.502546	-0.50677	-0.00024465	0.55772	0.00026924	0.050947	2.4595E-05	482.7586455714294	46.753	0.66854	47.224	46.938	47.607	0.47139					26	15	2	0	0	0	0.31972	1	4417	4417		63.306	9.9548	1	2539500			16019	3189	10944	10953	18522	18522					0.01933481034848228
IEPEKVKYG	9	Unmodified	_IEPEKVKYG_					0	0	0			REV__ENST00000253413.9_1_22:18111444-18111552:-|nuORF	REV__ENST00000253413.9_1_22:18111444-18111552:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.81689453125	2	531.795132	1061.57571	0.72728	0.00038676	3.3059	0.0017581	4.0332	0.0021448	531.7960562381636	88.98	0.12862	89.131	89.052	89.181	0.15055					4	2	2	0	0	0	0.20789	1	8863	8863		17.365	11.052	1	23165	+		16020	24304	10945	10954	18523	18523					0.04738609757487211
IEPGVSVSL	9	Unmodified	_IEPGVSVSL_					0	0	0		nc|ENSG00000133706|Q9P2J5-2|LARS1;ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-3|LARS1	nc|ENSG00000133706|Q9P2J5-2|LARS1	nc|ENSG00000133706|Q9P2J5-2|LARS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.75579833984375	2	450.755475	899.496398	-0.14159	-6.3823E-05	-2.8357	-0.0012782	-2.9773	-0.001342	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.77546	1	7705	7705		31.955	2.8053	1	109620			16021	3890	10946	10955	18524	18524					0.04262962803340997
IEPLHLVIKW	10	Unmodified	_IEPLHLVIKW_					0	0	0			REV__nc|ENSG00000151320|Q13023-2|AKAP6	REV__nc|ENSG00000151320|Q13023-2|AKAP6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	625.3681030273438	2	624.379166	1246.74378	2.018	0.00126	1.3139	0.00082035	3.3318	0.0020803	624.3798675397345	103.41	0.54173	103.64	103.38	103.92	0.22556					22	12	2	0	0	0	0.37624	1	12554	12554		15.642	4.1308	1	1136000	+		16022	20245	10947	10956	18525	18525					0.13027716741930817
IEPLHLVIKW	10	Unmodified	_IEPLHLVIKW_					0	0	0			REV__nc|ENSG00000151320|Q13023-2|AKAP6	REV__nc|ENSG00000151320|Q13023-2|AKAP6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	624.379166	1246.74378	2.9373	0.001834	-1.065	-0.00066496	1.8723	0.001169	624.8798051956746	103.65	0.35524	103.6	103.45	103.8	-0.043755	-0.053888	-0.002028	NaN	20.947	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114990	+		16023	20245	10947	10956							0.13027716741930817
IEPLHLVIKW	10	Unmodified	_IEPLHLVIKW_					0	0	0			REV__nc|ENSG00000151320|Q13023-2|AKAP6	REV__nc|ENSG00000151320|Q13023-2|AKAP6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	624.379166	1246.74378	-1.21	-0.00075551	5.1043	0.003187	3.8943	0.0024315	624.8837874441989	103.55	0.38627	103.67	103.42	103.81	0.11494	0.0098258	0.005676	NaN	20.947	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144250	+		16024	20245	10947	10956							0.13027716741930817
IEPLRQGSY	9	Unmodified	_IEPLRQGSY_					0	0	0			REV__ENST00000488642.6_1_12:1034631-1036165:-|nuORF	REV__ENST00000488642.6_1_12:1034631-1036165:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7825927734375	2	531.782556	1061.55056	0.46378	0.00024663	-1.044	-0.00055518	-0.58021	-0.00030855	531.7820031077274	29.432	2.4582	29.343	28.288	30.746	-0.089544					170	57	5	0	0	0	0.48102	1	1929	1929		52.937	5.2794	1	12586000	+		16025	24184	10948	10957	18526	18526					0.022245549549097632
IEPPVPPMEH	10	Unmodified	_IEPPVPPMEH_					0	0	0		ENSG00000176681|ENST00000320254|LRRC37A;ENSG00000176809|ENST00000584306|LRRC37A3;ENSG00000238083|ENST00000576629|LRRC37A2	ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.2823486328125	2	573.286617	1144.55868	-0.70198	-0.00040244	1.01	0.00057903	0.30803	0.00017659	573.2872652633222	30.15	0.60518	30.175	29.842	30.447	0.025013					21	14	2	0	0	0	0.85934	1	1537	1537		35.618	1.4457	1	66782			16026	7094	10949	10958	18527	18527					-0.007816341199941235
IEPQIRRPRSL	11	Unmodified	_IEPQIRRPRSL_					0	0	0		nc|ENSG00000049759|Q96PU5-9|NEDD4L;nc|ENSG00000049759|Q96PU5-4|NEDD4L;nc|ENSG00000049759|Q96PU5-2|NEDD4L;nc|ENSG00000049759|Q96PU5-6|NEDD4L;nc|ENSG00000049759|Q96PU5-5|NEDD4L;nc|ENSG00000049759|Q96PU5-7|NEDD4L;ENSG00000049759|ENST00000400345|NEDD4L	nc|ENSG00000049759|Q96PU5-9|NEDD4L	nc|ENSG00000049759|Q96PU5-9|NEDD4L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6087646484375	3	455.608882	1363.80482	-0.22489	-0.00010246	-0.74709	-0.00034038	-0.97198	-0.00044284	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.68431	2	7374	7314;7374		34.087	5.5098	1	1863900			16027	988	10950	10959	18528;18529	18529					0.13746621774089363
IEPQIRRPRSL	11	Unmodified	_IEPQIRRPRSL_					0	0	0		nc|ENSG00000049759|Q96PU5-9|NEDD4L;nc|ENSG00000049759|Q96PU5-4|NEDD4L;nc|ENSG00000049759|Q96PU5-2|NEDD4L;nc|ENSG00000049759|Q96PU5-6|NEDD4L;nc|ENSG00000049759|Q96PU5-5|NEDD4L;nc|ENSG00000049759|Q96PU5-7|NEDD4L;ENSG00000049759|ENST00000400345|NEDD4L	nc|ENSG00000049759|Q96PU5-9|NEDD4L	nc|ENSG00000049759|Q96PU5-9|NEDD4L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6085510253906	3	455.608882	1363.80482	-0.22342	-0.00010179	-0.82695	-0.00037677	-1.0504	-0.00047856	455.6084251791674	69.831	3.554	70.377	70.039	73.593	0.54693					191	88	3	0	0	0	0.68177	1	7843	7843		34.501	0.41439	1	1270100			16028	988	10950	10959	18530	18530					0.13746621774089363
IEPSAQAHG	9	Unmodified	_IEPSAQAHG_					0	0	0			REV__ENSG00000138375|ENST00000357276|SMARCAL1	REV__ENSG00000138375|ENST00000357276|SMARCAL1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.2356262207031	2	455.224874	908.435195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.457	1	67.487	66.987	67.987	0.030571								0	0	0	0.31117	1	6405	6405		26.693	1.2427	1		+		16029	19463	10951	10960	18531	18531					-0.022685491760853438
IEPSIFGAD	9	Unmodified	_IEPSIFGAD_					0	0	0			REV__ENST00000380121.7_1_13:33010521-33020605:-|nuORF	REV__ENST00000380121.7_1_13:33010521-33020605:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.758056640625	2	474.737283	947.460012	-0.60369	-0.00028659	1.6061	0.00076246	1.0024	0.00047587	474.73792226013785	35.127	0.43633	35.071	34.768	35.205	-0.056385					21	10	3	0	0	0	0.20789	1	2219	2219		27.882	0	1	38436	+		16030	25938	10952	10961	18532	18532					-0.015819140933672315
IEPSLGIH	8	Unmodified	_IEPSLGIH_					0	0	0			REV__ENST00000268251.12_1_16:8875406-8875859:+|nuORF	REV__ENST00000268251.12_1_16:8875406-8875859:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.2558898925781	2	433.242535	864.470518	0.73511	0.00031848	-3.7216	-0.0016123	-2.9865	-0.0012939	433.24225497246033	107.12	0.39633	107.22	106.87	107.26	0.091255					18	9	3	0	0	0	0.4196	1	11476	11476		28.254	0	1	1050600	+		16031	24515	10953	10962	18533	18533					0.03286113351714448
IEQDVKRTF	9	Unmodified	_IEQDVKRTF_					0	0	0		nc|ENSG00000131374|Q92609|TBC1D5;ENSG00000131374|ENST00000696125|TBC1D5	nc|ENSG00000131374|Q92609|TBC1D5	nc|ENSG00000131374|Q92609|TBC1D5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.363037109375	2	568.308938	1134.60332	-0.81795	-0.00046485	-2.5338	-0.00144	-3.3518	-0.0019049	568.8082736040262	43.609	1.0292	43.582	43.273	44.303	-0.026764					28	24	2	0	0	0	0.20789	1	3432	3432		40.778	27.966	1	89227			16032	3725	10954	10963	18534	18534					0.04140513017705416
IEQDVKRTF	9	Unmodified	_IEQDVKRTF_					0	0	0		nc|ENSG00000131374|Q92609|TBC1D5;ENSG00000131374|ENST00000696125|TBC1D5	nc|ENSG00000131374|Q92609|TBC1D5	nc|ENSG00000131374|Q92609|TBC1D5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	568.308938	1134.60332	-0.91901	-0.00052228	-2.0405	-0.0011596	-2.9595	-0.0016819	568.3082365482614	43.596	0.6961	43.56	43.405	44.101	-0.03582	-0.0010558	0.00036729	NaN	40.778	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62102			16033	3725	10954	10963							0.04140513017705416
IEQDVKRTF	9	Unmodified	_IEQDVKRTF_					0	0	0		nc|ENSG00000131374|Q92609|TBC1D5;ENSG00000131374|ENST00000696125|TBC1D5	nc|ENSG00000131374|Q92609|TBC1D5	nc|ENSG00000131374|Q92609|TBC1D5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	568.308938	1134.60332	0.0030091	1.7101E-06	-2.896	-0.0016458	-2.893	-0.0016441	568.8078553393617	43.543	0.37299	43.54	43.369	43.742	-0.002449	-0.020404	-0.00060512	NaN	40.778	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71322			16034	3725	10954	10963							0.04140513017705416
IEQEIRILL	9	Unmodified	_IEQEIRILL_					0	0	0		nc|ENSG00000136758|Q96TA2-3|YME1L1;ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1	nc|ENSG00000136758|Q96TA2-3|YME1L1	nc|ENSG00000136758|Q96TA2-3|YME1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.8450927734375	2	563.845156	1125.67576	-0.69495	-0.00039185	0.93106	0.00052497	0.2361	0.00013313	563.8454866018574	72.574	1.1535	72.96	72.499	73.652	0.38582					75	27	4	0	0	0	1.0535E-13	4	8105	8093;8105;8117;8130		172.25	40.533	1	2507100			16035	4135	10955	10964	18535;18536;18537;18538	18536					0.11794847091277916
IEQEIRILL	9	Unmodified	_IEQEIRILL_					0	0	0		nc|ENSG00000136758|Q96TA2-3|YME1L1;ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1	nc|ENSG00000136758|Q96TA2-3|YME1L1	nc|ENSG00000136758|Q96TA2-3|YME1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.844970703125	2	563.845156	1125.67576	0.46678	0.00026319	-0.25074	-0.00014138	0.21604	0.00012181	563.8448455446281	72.396	1.109	72.946	72.565	73.674	0.55008					68	26	4	0	0	0	2.0213E-05	3	8132	8108;8120;8132		154.12	41.707	1	2900000			16036	4135	10955	10964	18539;18540;18541	18541					0.11794847091277916
IEQEQKLAL	9	Unmodified	_IEQEQKLAL_					0	0	0		ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	ENSG00000138071|ENST00000260641|ACTR2	ENSG00000138071|ENST00000260641|ACTR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.3052368164062	2	536.305864	1070.59717	-0.72525	-0.00038896	0.63679	0.00034152	-0.088462	-4.7443E-05	536.3058052948317	45.258	0.40675	45.722	45.513	45.92	0.46313					19	9	3	0	0	0	0.36889	1	4199	4199		59.931	1.1488	1	424690			16037	4262	10956	10965	18542	18542					0.06469994786198185
IEQERVKSA	9	Unmodified	_IEQERVKSA_					0	0	0		ENST00000496230.5_1_1:155247534-155253965:+|nuORF;ENSG00000143630|ENST00000368358|HCN3	ENST00000496230.5_1_1:155247534-155253965:+|nuORF	ENST00000496230.5_1_1:155247534-155253965:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2930297851562	2	530.293288	1058.57202	-0.066725	-3.5384E-05	0.20402	0.00010819	0.1373	7.2808E-05	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.78528	1	9030	9030		29.17	0.020503	1	2084800			16038	4653	10957	10966	18543	18543					0.045079399836367884
IEQGKIGVVF	10	Unmodified	_IEQGKIGVVF_					0	0	0		nc|ENSG00000021645|Q9Y4C0-4|NRXN3;ENSG00000021645|ENST00000335750|NRXN3;nc|ENSG00000021645|Q9Y4C0|NRXN3;nc|ENSG00000021645|Q9Y4C0-3|NRXN3;nc|ENSG00000021645|Q9HDB5-3|NRXN3;nc|ENSG00000021645|Q9HDB5-2|NRXN3;nc|ENSG00000021645|Q9HDB5-4|NRXN3;nc|ENSG00000021645|Q9HDB5|NRXN3	nc|ENSG00000021645|Q9Y4C0-4|NRXN3;nc|ENSG00000021645|Q9HDB5-3|NRXN3	nc|ENSG00000021645|Q9HDB5-3|NRXN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3173217773438	2	545.318774	1088.623	-0.68757	-0.00037494	-3.0506	-0.0016636	-3.7382	-0.0020385	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.86348	1	8450	8450		31.53	2.3803	1	3608000			16039	848;14742	10958	10967	18544	18544					0.08222889028479585
IEQIERTY	8	Unmodified	_IEQIERTY_					0	0	0			REV__ENSG00000186472|ENST00000333891|PCLO	REV__ENSG00000186472|ENST00000333891|PCLO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.27490234375	2	526.274564	1050.53457	0.76856	0.00040447	-0.87035	-0.00045804	-0.10179	-5.357E-05	526.2739756029589	55.537	0.74533	55.938	55.614	56.359	0.40101					39	17	3	0	0	0	0.83456	1	5684	5684		60.972	6.1956	1	1585300	+		16040	22856	10959	10968	18545	18545					0.011328487180207958
IEQIGRKN	8	Unmodified	_IEQIGRKN_					0	0	0		nc|ENSG00000138709|Q659C4-4|LARP1B;nc|ENSG00000138709|Q659C4-9|LARP1B;nc|ENSG00000138709|Q659C4-2|LARP1B;ENSG00000138709|ENST00000326639|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2784423828125	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.85277	1	7569	7569		25.45	2.4077	1	1311100			16041	4321	10960	10969	18546	18546					0.060319920203255606
IEQIGRKN	8	Unmodified	_IEQIGRKN_					0	0	0		nc|ENSG00000138709|Q659C4-4|LARP1B;nc|ENSG00000138709|Q659C4-9|LARP1B;nc|ENSG00000138709|Q659C4-2|LARP1B;ENSG00000138709|ENST00000326639|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2777099609375	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.86677	1	8191	8191		27.882	2.3082	1	4644500			16042	4321	10960	10969	18547	18547					0.060319920203255606
IEQIGRKN	8	Unmodified	_IEQIGRKN_					0	0	0		nc|ENSG00000138709|Q659C4-4|LARP1B;nc|ENSG00000138709|Q659C4-9|LARP1B;nc|ENSG00000138709|Q659C4-2|LARP1B;ENSG00000138709|ENST00000326639|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2772216796875	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.87922	1	8190	8190		31.955	0	1	2046100			16043	4321	10960	10969	18548	18548					0.060319920203255606
IEQIGRKN	8	Unmodified	_IEQIGRKN_					0	0	0		nc|ENSG00000138709|Q659C4-4|LARP1B;nc|ENSG00000138709|Q659C4-9|LARP1B;nc|ENSG00000138709|Q659C4-2|LARP1B;ENSG00000138709|ENST00000326639|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2776184082031	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.90523	1	7956	7956		40.778	1.5253	1	1802300			16044	4321	10960	10969	18549	18549					0.060319920203255606
IEQKGLQHRL	10	Unmodified	_IEQKGLQHRL_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3536376953125	2	611.356754	1220.69895	-0.22744	-0.00013904	-0.12961	-7.924E-05	-0.35705	-0.00021828	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.82886	1	9513	9513		37.812	4.9991	1	8715400			16045	3299	10961	10970	18550	18550					0.09743285928607293
IEQKGLQHRL	10	Unmodified	_IEQKGLQHRL_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3511352539062	2	611.356754	1220.69895	-1.2523	-0.00076561	-0.012793	-7.8212E-06	-1.2651	-0.00077343	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.63899	1	9608	9608		47.96	5.0953	1	5978100			16046	3299	10961	10970	18551	18551					0.09743285928607293
IEQKIKVLKVA	11	Unmodified	_IEQKIKVLKVA_					0	0	0			REV__nc|ENSG00000009307|O75534-2|CSDE1	REV__nc|ENSG00000009307|O75534-2|CSDE1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8928833007812	2	634.918655	1267.82276	0.93398	0.000593	3.6357	0.0023084	4.5697	0.0029014	634.9212234293121	105.79	0.23537	105.89	105.8	106.03	0.099007					10	5	2	0	0	0	0.17432	1	11297	11297		37.812	2.1932	1	219660	+		16047	16146	10962	10971	18552	18552					0.19955943976219714
IEQKLFTLL	9	Unmodified	_IEQKLFTLL_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.8328857421875	2	552.8368	1103.65905	-1.299	-0.00071813	-3.9295	-0.0021724	-5.2285	-0.0028905	552.8347210563574	83.7	2.6246	83.838	82.553	85.177	0.13811					95	60	2	0	0	0	0.73802	1	8046	8046		37.812	7.4938	1	186100	+		16048	30102	10963	10972	18553	18553					0.1113634620535322
IEQLLPHLSMD	11	Unmodified	_IEQLLPHLSMD_					0	0	0			REV__ENSG00000132170|ENST00000651735|PPARG	REV__ENSG00000132170|ENST00000651735|PPARG	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59765625	3	432.560317	1294.65912	0.73467	0.00031779	-1.7023	-0.00073636	-0.96767	-0.00041857	432.8951582730535	106.09	0.23431	106.19	106.03	106.27	0.099007					6	5	2	0	0	0	0.17334	1	11326	11326		21.78	0	1	61636	+		16049	18986	10964	10973	18554	18554					0.023579781430044022
IEQLRRLHV	9	Unmodified	_IEQLRRLHV_					0	0	0			REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3534545898438	2	582.354014	1162.69348	0.75692	0.00044079	-1.142	-0.00066503	-0.38505	-0.00022424	582.3532376593708	103.08	2.584	103.3	103	105.58	0.22556					189	68	3	0	0	0	0.76255	1	12570	12570		35.618	4.0885	1	7736200	+		16050	18407	10965	10974	18555	18555					0.1186360713677459
IEQLVLPKLRS	11	Unmodified	_IEQLVLPKLRS_					0	0	0			REV__ENSG00000147082|ENST00000376042|CCNB3	REV__ENSG00000147082|ENST00000376042|CCNB3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.59771728515625	3	432.606367	1294.79727	2.7173	0.0011755	1.4866	0.00064312	4.2039	0.0018186	432.6070389999692	106.38	0.30284	106.34	106.14	106.44	-0.03714					9	6	2	0	0	0	0.17354	1	11769	11769		23.514	7.5937	1	64692	+		16051	20049	10966	10975	18556	18556					0.16166469453787613
IEQNKKALKVC	11	Unmodified	_IEQNKKALKVC_					0	0	0			REV__ENSG00000171495|ENST00000399564|MROH2B	REV__ENSG00000171495|ENST00000399564|MROH2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	637.3670654296875	2	637.368472	1272.72239	2.7628	0.0017609	0.41078	0.00026182	3.1736	0.0020227	637.3686513642523	105.87	2.2422	105.84	105.02	107.26	-0.03714					153	52	4	0	0	0	0.67778	1	11718	11718		35.152	12.572	1	1640000	+		16052	21738	10967	10976	18557	18557					0.09693963650920523
IEQNKKALKVC	11	Unmodified	_IEQNKKALKVC_					0	0	0			REV__ENSG00000171495|ENST00000399564|MROH2B	REV__ENSG00000171495|ENST00000399564|MROH2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	637.36865234375	2	637.368472	1272.72239	1.4683	0.00093584	1.7443	0.0011118	3.2126	0.0020476	637.3694673985003	105.74	2.5255	105.78	104.95	107.48	0.038322					168	59	4	0	0	0	0.72739	1	11582	11582		27.047	4.4677	1	1651800	+		16053	21738	10967	10976	18558	18558					0.09693963650920523
IEQSAPDDL	9	Unmodified	_IEQSAPDDL_					0	0	0			REV__ENSG00000100412|ENST00000216254|ACO2	REV__ENSG00000100412|ENST00000216254|ACO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.2379455566406	2	494.235104	986.455655	-0.25255	-0.00012482	0.90115	0.00044538	0.6486	0.00032056	494.2355038508862	22.35	0.64511	22.291	21.969	22.614	-0.05867					32	25	2	0	0	0	0.48102	1	703	703		52.937	2.9122	1	46843	+		16054	17190	10968	10977	18559	18559					-0.03811423306956385
IEQSAPDDL	9	Unmodified	_IEQSAPDDL_					0	0	0			REV__ENSG00000100412|ENST00000216254|ACO2	REV__ENSG00000100412|ENST00000216254|ACO2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	494.235104	986.455655	-0.25255	-0.00012482	0.90115	0.00044538	0.6486	0.00032056	494.2355038508862	22.35	0.64511	22.291	21.969	22.614	-0.05867	0.14852	-0.0003142	NaN	52.937	32	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46843	+		16055	17190	10968	10977							-0.03811423306956385
IEQSAPDDL	9	Unmodified	_IEQSAPDDL_					0	0	0			REV__ENSG00000100412|ENST00000216254|ACO2	REV__ENSG00000100412|ENST00000216254|ACO2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	494.235104	986.455655	-0.72802	-0.00035981	1.4828	0.00073287	0.75482	0.00037306	494.23568676639104	22.239	0.33673	22.287	22.047	22.383	0.048553	0.14482	0.00026079	NaN	52.937	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43121	+		16056	17190	10968	10977							-0.03811423306956385
IEQSAPDDL	9	Unmodified	_IEQSAPDDL_					0	0	0			REV__ENSG00000100412|ENST00000216254|ACO2	REV__ENSG00000100412|ENST00000216254|ACO2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	494.235104	986.455655	0.71189	0.00035184	0.02534	1.2524E-05	0.73723	0.00036436	494.2349375891635	22.12	0.3954	22.111	21.858	22.254	-0.0088215	-0.03169	-0.0011799	NaN	52.937	25	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31575	+		16057	17190	10968	10977							-0.03811423306956385
IEQSVSRLQ	9	Unmodified	_IEQSVSRLQ_					0	0	0			REV__ENSG00000180113|ENST00000316081|TDRD6	REV__ENSG00000180113|ENST00000316081|TDRD6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2930908203125	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.6204	1	8930	8930		45.972	8.8131	1	1390700	+		16058	22378	10969	10978	18560	18560					0.045079399836367884
IEQTDPPSD	9	Unmodified	_IEQTDPPSD_					0	0	0			REV__ENSG00000153207|ENST00000648844|AHCTF1	REV__ENSG00000153207|ENST00000648844|AHCTF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2902526855469	2	501.224736	1000.43492	1.0875	0.0005451	-2.3579	-0.0011818	-1.2703	-0.00063672	501.22364773749734	86.742	0.2121	86.668	86.562	86.774	-0.074005					5	4	2	0	0	0	0.20789	1	8968	8968		24.519	0.99649	1	23538	+		16059	20337	10970	10979	18561	18561					-0.06528013686602208
IEQTSSKRP	9	Unmodified	_IEQTSSKRP_					0	0	0			REV__nc|ENSG00000160271|Q12967-4|RALGDS	REV__nc|ENSG00000160271|Q12967-4|RALGDS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3035888671875	2	523.285463	1044.55637	-0.8934	-0.0004675	-3.7339	-0.0019539	-4.6273	-0.0024214	523.78496300627	88.053	1.1313	88.516	87.936	89.067	0.46312					45	27	3	0	0	0	0.20789	1	10342	10342		31.53	2.3598	1	257540	+		16060	29965	10971	10980	18562	18562					0.03587653466570373
IEQVLPQQF	9	Unmodified	_IEQVLPQQF_					0	0	0			REV__ENSG00000065491|ENST00000373491|TBC1D22B	REV__ENSG00000065491|ENST00000373491|TBC1D22B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.3003540039062	2	551.300581	1100.58661	0.42533	0.00023448	-0.38372	-0.00021154	0.041609	2.2939E-05	551.3002180424792	56.888	0.67147	57.443	57.136	57.808	0.55512					26	15	2	0	0	0	0.58668	1	5896	5896		47.657	1.6851	1	372410	+		16061	16502	10972	10981	18563	18563					0.04034012131751297
IEQVLPQQF	9	Unmodified	_IEQVLPQQF_					0	0	0			REV__ENSG00000065491|ENST00000373491|TBC1D22B	REV__ENSG00000065491|ENST00000373491|TBC1D22B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	551.300581	1100.58661	-1.3634	-0.00075163	1.8438	0.0010165	0.48044	0.00026487	551.3017297319262	56.996	0.58375	57.393	57.116	57.699	0.39672	-0.025316	0.0018035	NaN	47.657	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	349380	+		16062	16502	10972	10981							0.04034012131751297
IEQVLPQQF	9	Unmodified	_IEQVLPQQF_					0	0	0			REV__ENSG00000065491|ENST00000373491|TBC1D22B	REV__ENSG00000065491|ENST00000373491|TBC1D22B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	551.300581	1100.58661	0.42533	0.00023448	-0.38372	-0.00021154	0.041609	2.2939E-05	551.3002180424792	56.888	0.67147	57.443	57.136	57.808	0.55512	0.025316	-0.00065255	NaN	47.657	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	372410	+		16063	16502	10972	10981							0.04034012131751297
IERGVQKAR	9	Unmodified	_IERGVQKAR_					0	0	0			REV__ENST00000533421.2_1_11:65820160-65823021:+|nuORF	REV__ENST00000533421.2_1_11:65820160-65823021:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7633056640625	2	528.817264	1055.61998	-0.36719	-0.00019418	1.2503	0.00066118	0.88312	0.00046701	528.8185212632236	60.313	0.52596	60.866	60.654	61.18	0.55323					24	14	2	0	0	0	0.1939	1	6425	6425		71.877	2.2498	1	350750	+		16064	28345	10973	10982	18564	18564					0.09439058694306368
IERLTDKMEL	10	Oxidation (M)	_IERLTDKM(Oxidation (M))EL_		IERLTDKM(1)EL		IERLTDKM(71)EL	0	0	1			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|121|3|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|121|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.8916015625	3	421.891956	1262.65404	0.086923	3.6672E-05	-1.5715	-0.00066299	-1.4845	-0.00062632	421.8912283543651	28.979	0.91446	29.091	28.756	29.67	0.11225					126	46	4	0	0	0	0.31985	1	1207	1207		70.816	10.649	1	973080	+		16065	29631	10974	10983	18565	18565		432			0.033216742804142996
IERQHEQQL	9	Unmodified	_IERQHEQQL_					0	0	0			REV__ENST00000487055.1_1_5:132036305-132039285:-|nuORF	REV__ENST00000487055.1_1_5:132036305-132039285:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8090209960938	2	590.807094	1179.59963	-0.64684	-0.00038215	3.4481	0.0020372	2.8013	0.001655	590.8091423509106	59.998	1.5026	59.984	59.286	60.789	-0.013729					96	38	3	0	0	0	0.15959	1	5496	5496		82.241	15.811	1	6218400	+		16066	18953	10975	10984	18566	18566					0.017018432438590025
IERRLIDS	8	Unmodified	_IERRLIDS_					0	0	0			REV__ENSG00000025423|ENST00000322165|HSD17B6	REV__ENSG00000025423|ENST00000322165|HSD17B6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29376220703125	2	501.290548	1000.56654	-0.86867	-0.00043546	0.96116	0.00048182	0.092492	4.6365E-05	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.87922	1	9851	9851		31.955	0.42505	1	2445400	+		16067	16257	10976	10985	18567	18567					0.06628261191815454
IERRLVSA	8	Unmodified	_IERRLVSA_					0	0	0			REV__ENSG00000154814|ENST00000285083|OXNAD1	REV__ENSG00000154814|ENST00000285083|OXNAD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2878723144531	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.88601	1	11547	11547		34.173	0	1	24731000	+		16068	20403	10977	10986	18568	18568					0.08748582400005489
IERRQEKKKGR	11	Unmodified	_IERRQEKKKGR_					0	0	0			REV__nc|ENSG00000017427|P05019|IGF1	REV__nc|ENSG00000017427|P05019|IGF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6241455078125	3	476.623303	1426.84808	2.8112	0.0013399	-1.9889	-0.00094794	0.82234	0.00039195	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.79224	1	13260	13260		12.957	2.3707	1	2689700	+		16069	29676	10978	10987	18569	18569					0.15172811551337873
IERVHKKIKQ	10	Unmodified	_IERVHKKIKQ_					0	0	0		nc|ENSG00000066827|Q9P243-4|ZFAT;nc|ENSG00000066827|Q9P243-2|ZFAT;ENSG00000066827|ENST00000377838|ZFAT;chr8:134565152-134565333|13|11.31|0.51|4.48|-|ENST00000523243|ZFAT,ZFAT;nc|ENSG00000066827|Q9P243-3|ZFAT	nc|ENSG00000066827|Q9P243-4|ZFAT;nc|ENSG00000066827|Q9P243-3|ZFAT	nc|ENSG00000066827|Q9P243-4|ZFAT	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	427.302734375	3	426.93834	1277.79319	-0.96444	-0.00041176	2.0322	0.00086764	1.0678	0.00045589	427.27302570401855	62.926	0.086731	62.949	62.887	62.974	0.022987					5	3	2	0	0	0	0.37624	1	5492	5492		3.8434	0	1	31078			16070	1168;14767	10979	10988	18570	18570					0.16540424750746752
IERVLRNKIR	10	Unmodified	_IERVLRNKIR_					0	0	0		ENST00000438698.1_1_3:10029596-10035934:+|nuORF	ENST00000438698.1_1_3:10029596-10035934:+|nuORF	ENST00000438698.1_1_3:10029596-10035934:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.392822265625	2	648.91477	1295.81499	1.6034	0.0010404	-2.6028	-0.001689	-0.99944	-0.00064855	648.9127854473696	107.41	0.16932	107.55	107.44	107.61	0.13866					5	3	2	0	0	0	0.37624	1	11545	11545		31.53	11.533	1	81718			16071	11756	10980	10989	18571	18571					0.17891229499309702
IESFADLL	8	Unmodified	_IESFADLL_					0	0	0			REV__nc|ENSG00000168016|O15050|TRANK1	REV__nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	454.24212646484375	2	454.242201	906.469849	-1.2081	-0.00054875	1.3597	0.00061761	0.1516	6.8863E-05	454.24273056729567	82.949	0.99055	83.104	82.71	83.7	0.15474					33	22	2	0	0	0	0.91005	1	8025	8025		42.474	1.9018	1	256350	+		16072	21451	10981	10990	18572	18572					0.012872739120098231
IESKRPRLELL	11	Unmodified	_IESKRPRLELL_					0	0	0		nc|ENSG00000196498|Q9Y618-5|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;ENSG00000196498|ENST00000405201|NCOR2	nc|ENSG00000196498|Q9Y618-5|NCOR2	nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.2768859863281	3	451.945271	1352.81398	0.028854	1.304E-05	-4.4232	-0.0019991	-4.3944	-0.001986	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.76579	1	4840	4840		18.531	2.6104	1	513120			16073	8064	10982	10991	18573	18573					0.15168970339777843
IESKRPRLELL	11	Unmodified	_IESKRPRLELL_					0	0	0		nc|ENSG00000196498|Q9Y618-5|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;ENSG00000196498|ENST00000405201|NCOR2	nc|ENSG00000196498|Q9Y618-5|NCOR2	nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.94329833984375	3	451.945271	1352.81398	-1.2962	-0.0005858	-3.44	-0.0015547	-4.7362	-0.0021405	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.76579	1	4327	4327		18.531	0	1	734340			16074	8064	10982	10991	18574	18574					0.15168970339777843
IESLHDKFK	9	Unmodified	_IESLHDKFK_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.803955078125	2	558.806031	1115.59751	-0.32317	-0.00018059	-3.4964	-0.0019538	-3.8196	-0.0021344	558.8038892213029	49.437	0.66257	49.413	49.058	49.721	-0.024029					32	14	3	0	0	0	0.71772	1	4220	4220		39.253	3.6345	1	316600			16075	8133	10983	10992	18575	18575					0.04433414506047484
IESNHPIVL	9	Unmodified	_IESNHPIVL_					0	0	0		nc|ENSG00000065150|O00410-2|IPO5;ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-3|IPO5;ENST00000493122.1_1_13:98671845-98673393:+|nuORF	nc|ENSG00000065150|O00410-2|IPO5	nc|ENSG00000065150|O00410-2|IPO5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.28997802734375	2	511.287474	1020.5604	-0.37257	-0.00019049	0.14194	7.2574E-05	-0.23063	-0.00011792	511.2874762659906	46.551	0.76659	47.474	47.191	47.958	0.92315					25	17	2	0	0	0	0.18338	2	4406	4406;4419		77.318	10.846	1	1500200			16076	1121	10984	10993	18576;18577	18576					0.05093742960275449
IESNHPIVL	9	Unmodified	_IESNHPIVL_					0	0	0		nc|ENSG00000065150|O00410-2|IPO5;ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-3|IPO5;ENST00000493122.1_1_13:98671845-98673393:+|nuORF	nc|ENSG00000065150|O00410-2|IPO5	nc|ENSG00000065150|O00410-2|IPO5	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	511.287474	1020.5604	-0.61526	-0.00031458	0.56414	0.00028844	-0.051117	-2.6136E-05	511.28771791246743	46.729	0.664	47.201	46.856	47.52	0.47139	-0.13658	0.00015767	NaN	77.318	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1468900			16077	1121	10984	10993							0.05093742960275449
IESPLFLKL	9	Unmodified	_IESPLFLKL_					0	0	0		ENST00000468499.5_1_7:99687333-99688626:+|nuORF;ENST00000496358.1_1_7:99686670-99688376:+|nuORF;ENSG00000168090|ENST00000303904|COPS6	ENST00000468499.5_1_7:99687333-99688626:+|nuORF	ENST00000468499.5_1_7:99687333-99688626:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.3253784179688	2	530.326068	1058.63758	0.34892	0.00018504	-0.10189	-5.4036E-05	0.24703	0.00013101	530.3254730445203	79.864	0.88874	80.28	79.827	80.716	0.41621					32	20	3	0	0	0	0.057432	2	9144	9144;9162		104.75	13.97	1	436340			16078	6369	10985	10994	18578;18579	18578					0.11060961176622186
IESPLFLKL	9	Unmodified	_IESPLFLKL_					0	0	0		ENST00000468499.5_1_7:99687333-99688626:+|nuORF;ENST00000496358.1_1_7:99686670-99688376:+|nuORF;ENSG00000168090|ENST00000303904|COPS6	ENST00000468499.5_1_7:99687333-99688626:+|nuORF	ENST00000468499.5_1_7:99687333-99688626:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.3255004882812	2	530.326068	1058.63758	0.0089244	4.7328E-06	-0.4227	-0.00022417	-0.41377	-0.00021944	530.3256204219164	79.693	1.1015	80.243	79.956	81.058	0.54945					33	25	2	0	0	0	0.14386	1	9170	9170		84.916	0	1	439140			16079	6369	10985	10994	18580	18580					0.11060961176622186
IESRPPLKRLS	11	Unmodified	_IESRPPLKRLS_					0	0	0			REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.59771728515625	3	432.597983	1294.77212	-0.96173	-0.00041604	1.3295	0.00057514	0.36778	0.0001591	432.5984432488919	107.49	0.99143	107.49	106.84	107.83	0					54	23	3	0	0	0	0.72739	1	11185	11185		30.139	5.0132	1	9853300	+		16080	19957	10986	10995	18581	18581					0.13652414651232903
IETAQRQCP	9	Unmodified	_IETAQRQCP_					0	0	0		ENSG00000038219|ENST00000040738|BOD1L1	ENSG00000038219|ENST00000040738|BOD1L1	ENSG00000038219|ENST00000040738|BOD1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.259521484375	2	523.258391	1044.50223	-0.58611	-0.00030669	3.9728	0.0020788	3.3867	0.0017721	523.7610662863972	60.377	0.92597	60.408	60.027	60.953	0.0312					81	26	4	0	0	0	0.55097	1	5615	5615		49.442	8.6634	1	376950			16081	913	10987	10996	18582	18582					-0.01824261956630835
IETGPQAAAMD	11	Unmodified	_IETGPQAAAMD_					0	0	0			REV__nc|ENSG00000141027|O75376-2|NCOR1	REV__nc|ENSG00000141027|O75376-2|NCOR1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8334350585938	2	552.255514	1102.49647	0.71436	0.00039451	-2.9489	-0.0016285	-2.2345	-0.001234	552.2538223790705	85.331	1.9779	85.48	84.259	86.237	0.14857					67	45	2	0	0	0	0.17382	1	8196	8196		28.081	0	1	69164	+		16082	19657	10988	10997	18583	18583					-0.05067405258978397
IETIVPTGA	9	Unmodified	_IETIVPTGA_					0	0	0			REV__ENST00000586884.1_1_18:47798982-47799349:-|nuORF	REV__ENST00000586884.1_1_18:47798982-47799349:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7542724609375	2	450.755475	899.496398	-0.14135	-6.3713E-05	-2.6678	-0.0012025	-2.8092	-0.0012662	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.78536	1	8037	8037		29.15	2.3535	1	337080	+		16083	19705	10989	10998	18584	18584					0.04262962803340997
IETIVPTGA	9	Unmodified	_IETIVPTGA_					0	0	0			REV__ENST00000586884.1_1_18:47798982-47799349:-|nuORF	REV__ENST00000586884.1_1_18:47798982-47799349:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7548522949219	2	450.755475	899.496398	0.78548	0.00035406	-3.6838	-0.0016605	-2.8984	-0.0013065	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.7932	1	8009	8009		23.042	1.0826	1	420760	+		16084	19705	10989	10998	18585	18585					0.04262962803340997
IETIVPTGA	9	Unmodified	_IETIVPTGA_					0	0	0			REV__ENST00000586884.1_1_18:47798982-47799349:-|nuORF	REV__ENST00000586884.1_1_18:47798982-47799349:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7547302246094	2	450.755475	899.496398	-1.264	-0.00056978	-1.5875	-0.00071559	-2.8516	-0.0012854	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.7932	1	7735	7735		24.203	1.1603	1	414240	+		16085	19705	10989	10998	18586	18586					0.04262962803340997
IETNANGNKTY	11	Unmodified	_IETNANGNKTY_					0	0	0		L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|19|1|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|19|1|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|19|1|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8801879882812	2	612.796392	1223.57823	0.91248	0.00055917	3.832	0.0023482	4.7445	0.0029074	612.79785573344	105.12	0.24716	105.23	105.07	105.31	0.10766					7	5	2	0	0	0	0.17527	1	11202	11202		56.434	17.68	1	53257			16086	14550	10990	10999	18587	18587					-0.024615865755095
IETNLMVNLGI	11	Unmodified	_IETNLMVNLGI_					0	0	0		ENST00000515140.1_3_4:68340585-68358532:-|nuORF;ENST00000513216.5_3_4:68338325-68358532:-|nuORF	ENST00000515140.1_3_4:68340585-68358532:-|nuORF	ENST00000515140.1_3_4:68340585-68358532:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.8350830078125	2	608.833931	1215.65331	3.145	0.0019148	1.8963	0.0011545	5.0413	0.0030693	608.8349484484327	110.59	1.437	110.57	110.28	111.71	-0.027641					106	45	4	0	0	0	0.65746	1	12297	12297		37.812	1.3648	1	3029200			16087	13048	10991	11000	18588	18588					0.05410879631358512
IETPLVVALP	10	Unmodified	_IETPLVVALP_					0	0	0			REV__nc|ENSG00000153064|Q8NDB2-4|BANK1	REV__nc|ENSG00000153064|Q8NDB2-4|BANK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3250732421875	2	526.323525	1050.6325	-0.18304	-9.6338E-05	2.014	0.00106	1.8309	0.00096366	526.324520166758	61.08	1.3849	61.181	59.837	61.222	0.10082					92	55	2	0	0	0	0.71042	1	5211	5211		44.117	6.9577	1	275350	+		16088	20329	10992	11001	18589	18589					0.10920657313999982
IETPMMNII	9	Unmodified	_IETPMMNII_					0	0	0		ENST00000566560.5_1_16:75668010-75682538:-|nuORF;ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1	ENST00000566560.5_1_16:75668010-75682538:-|nuORF	ENST00000566560.5_1_16:75668010-75682538:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2697143554688	2	531.272121	1060.52969	-0.3129	-0.00016623	-0.54823	-0.00029126	-0.86112	-0.00045749	531.2716931508693	46.323	0.5637	46.794	46.457	47.021	0.47139					40	13	4	0	0	0	0.0018445	1	4369	4369		143.11	6.8388	1	4642100			16089	1127	10993	11002	18590	18590					0.00184505259380785
IETRPLLD	8	Unmodified	_IETRPLLD_					0	0	0			REV__nc|ENSG00000175216|Q14008-2|CKAP5	REV__nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.80194091796875	2	478.7742	955.533846	0.89711	0.00042951	-3.5444	-0.001697	-2.6473	-0.0012674	478.77246863112157	50.648	0.2888	51.095	50.926	51.215	0.44761					11	6	2	0	0	0	0.4196	1	4989	4989		29.15	0	1	132440	+		16090	22050	10994	11003	18591	18591					0.054300540689382615
IETSPPLLI	9	Unmodified	_IETSPPLLI_					0	0	0			REV__ENST00000535434.5_1_12:6977511-6977565:+|nuORF	REV__ENST00000535434.5_1_12:6977511-6977565:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7950744628906	2	491.794601	981.574648	-2.0878	-0.0010268	4.3361	0.0021325	2.2483	0.0011057	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.76996	1	4910	4910		33.516	6.7195	1	1484300	+		16091	28388	10995	11004	18592	18592					0.08312395388577443
IETSPPLLI	9	Unmodified	_IETSPPLLI_					0	0	0			REV__ENST00000535434.5_1_12:6977511-6977565:+|nuORF	REV__ENST00000535434.5_1_12:6977511-6977565:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7956237792969	2	491.794601	981.574648	-0.344	-0.00016918	2.8827	0.0014177	2.5387	0.0012485	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.7932	1	4236	4236		25.45	2.4077	1	412030	+		16092	28388	10995	11004	18593	18593					0.08312395388577443
IETSVSRI	8	Unmodified	_IETSVSRI_					0	0	0		ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.22869873046875	2	452.758549	903.502546	1.1875	0.00053767	-0.13523	-6.1228E-05	1.0523	0.00047644	452.75842297687063	107.16	0.62731	107.27	106.94	107.57	0.10396					27	20	2	0	0	0	0.4196	1	13048	13048		32.812	0	1	157430			16093	1150	10996	11005	18594	18594					0.04693481034871638
IEVADVSMRNA	11	Unmodified	_IEVADVSMRNA_					0	0	0			REV__nc|ENSG00000263001|P78347-5|GTF2I	REV__nc|ENSG00000263001|P78347-5|GTF2I	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	602.8025512695312	2	602.803162	1203.59177	0.97327	0.00058669	-4.2804	-0.0025802	-3.3071	-0.0019935	602.8004011190249	72.823	0.83628	72.952	72.522	73.358	0.12921					70	29	3	0	0	0	0.68532	1	6720	6720		33.922	3.6039	1	532890	+		16094	23951	10997	11006	18595	18595					-0.0018805206791512319
IEVDGKQVEL	10	Unmodified	_IEVDGKQVEL_					0	0	0		ENSG00000143878|ENST00000272233|RHOB;ENSG00000155366|ENST00000339083|RHOC;ENSG00000067560|ENST00000418115|RHOA	ENSG00000143878|ENST00000272233|RHOB	ENSG00000143878|ENST00000272233|RHOB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.3096923828125	2	565.308603	1128.60265	-0.57308	-0.00032397	0.021675	1.2253E-05	-0.55141	-0.00031172	565.3085566662036	60.56	0.88667	60.949	60.508	61.395	0.38945					90	24	5	0	0	0	0.013955	8	6420	6392;6399;6408;6420;6431;6441;6450;6462		128.6	30.02	1	18228000			16095	4672	10998	11007	18596;18597;18598;18599;18600;18601;18602;18603	18599					0.04349673578008151
IEVDGKQVEL	10	Unmodified	_IEVDGKQVEL_					0	0	0		ENSG00000143878|ENST00000272233|RHOB;ENSG00000155366|ENST00000339083|RHOC;ENSG00000067560|ENST00000418115|RHOA	ENSG00000143878|ENST00000272233|RHOB	ENSG00000143878|ENST00000272233|RHOB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.3084716796875	2	565.308603	1128.60265	0.11296	6.3858E-05	-0.68603	-0.00038782	-0.57307	-0.00032396	565.3082235409761	60.393	0.96679	60.946	60.581	61.548	0.55323					88	28	5	0	0	0	9.3456E-07	8	6435	6393;6402;6413;6424;6435;6445;6456;6468		148.69	33.796	1	20858000			16096	4672	10998	11007	18604;18605;18606;18607;18608;18609;18610;18611	18608					0.04349673578008151
IEVEMEDF	8	Unmodified	_IEVEMEDF_					0	0	0			REV__ENSG00000112159|ENST00000369393|MDN1	REV__ENSG00000112159|ENST00000369393|MDN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.2173767089844	2	506.220608	1010.42666	0.97194	0.00049202	-3.5243	-0.0017841	-2.5523	-0.001292	506.2187233884026	20.446	0.44918	20.517	20.31	20.759	0.071127					27	18	2	0	0	0	0.89962	1	487	487		38.806	3.1879	1	35707	+		16097	17920	10999	11008	18612	18612					-0.07813283927578141
IEVEMEDF	8	Unmodified	_IEVEMEDF_					0	0	0			REV__ENSG00000112159|ENST00000369393|MDN1	REV__ENSG00000112159|ENST00000369393|MDN1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	506.220608	1010.42666	0.97194	0.00049202	-3.5243	-0.0017841	-2.5523	-0.001292	506.2187233884026	20.446	0.44918	20.517	20.31	20.759	0.071127	0	0	NaN	38.806	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35707	+		16098	17920	10999	11008							-0.07813283927578141
IEVENKEVL	9	Unmodified	_IEVENKEVL_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.796142578125	2	536.797872	1071.58119	-1.0574	-0.0005676	0.12608	6.7677E-05	-0.9313	-0.00049992	536.7978036732638	47.541	1.1977	48.012	47.432	48.63	0.47139					65	29	4	0	0	0	0.030919	3	4526	4526;4537;4548		117.81	21.522	1	4494400			16099	6838	11000	11009	18613;18614;18615	18613					0.04826288549293167
IEVENKEVL	9	Unmodified	_IEVENKEVL_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7971801757812	2	536.797872	1071.58119	-1.3657	-0.00073313	0.52527	0.00028197	-0.84047	-0.00045116	536.7980220344277	47.328	0.86889	48.252	47.915	48.784	0.92315					58	21	4	0	0	0	0.014602	2	4520	4520;4532		129.42	13.927	1	4699500			16100	6838	11000	11009	18616;18617	18616					0.04826288549293167
IEVFMKNSFK	10	Unmodified	_IEVFMKNSFK_					0	0	0		ENSG00000154451|ENST00000370459|GBP5;ENST00000481145.1_1_1:89729385-89732242:-|nuORF;nc|ENSG00000154451|Q96PP8-2|GBP5;ENSG00000162645|ENST00000370466|GBP2	ENSG00000154451|ENST00000370459|GBP5;ENSG00000162645|ENST00000370466|GBP2	ENSG00000162645|ENST00000370466|GBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.832275390625	2	621.831191	1241.64783	0.83333	0.00051819	2.4656	0.0015332	3.2989	0.0020514	621.8322350101107	64.063	0.76965	64.618	64.213	64.982	0.5545					39	17	3	0	0	0	0.4892	1	6934	6934		56.721	1.9447	1	309100			16101	5712;5278	11001	11010	18618	18618					0.03667200839549878
IEVHAPISIRR	11	Unmodified	_IEVHAPISIRR_					0	0	0			REV__ENST00000383775.4_1_3:16302281-16306340:-|nuORF	REV__ENST00000383775.4_1_3:16302281-16306340:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.8839111328125	2	645.885678	1289.7568	-1.1412	-0.00073708	-1.2662	-0.00081784	-2.4074	-0.0015549	645.8847051303749	106.33	1.2879	106.38	106.14	107.43	0.053757					81	30	3	0	0	0	0.7342	1	11314	11314		25.574	2.0514	1	1694400	+		16102	25985	11002	11011	18619	18619					0.12351547854018463
IEVISEPPE	9	Unmodified	_IEVISEPPE_					0	0	0		ENSG00000266028|ENST00000573034|SRGAP2;ENST00000471256.1_1:206619445-206629134:+|nuORF	ENSG00000266028|ENST00000573034|SRGAP2	ENSG00000266028|ENST00000573034|SRGAP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3032531738281	2	506.763497	1011.51244	0.65996	0.00033444	-0.90289	-0.00045755	-0.24293	-0.00012311	506.7631367137878	70.523	0.3986	71.07	70.843	71.242	0.54756					15	9	2	0	0	0	0.20789	1	7875	7875		21.96	0	1	62464			16103	8949	11003	11012	18620	18620					0.007146242495764454
IEVLHYLLQS	10	Unmodified	_IEVLHYLLQS_					0	0	0		ENSG00000105137|ENST00000342784|SYDE1;nc|ENSG00000105137|Q6ZW31-2|SYDE1	ENSG00000105137|ENST00000342784|SYDE1	ENSG00000105137|ENST00000342784|SYDE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.9009094238281	3	405.564168	1213.67067	-1.0529	-0.00042701	2.5673	0.0010412	1.5144	0.00061418	405.5651485487608	63.261	1.4207	63.284	62.805	64.225	0.022984					129	62	3	0	0	0	0.86471	1	5564	5564		22.562	0	1	264990			16104	2189	11004	11013	18621	18621					0.0723854322866373
IEVRLILRNK	10	Unmodified	_IEVRLILRNK_					0	0	0			REV__ENST00000361577.7_2_14:45473380-45475258:+|nuORF	REV__ENST00000361577.7_2_14:45473380-45475258:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.60382080078125	3	418.60659	1252.79794	-0.53977	-0.00022595	-3.8565	-0.0016144	-4.3963	-0.0018403	418.6048372602651	50.241	1.6129	50.149	48.812	50.425	-0.091793					54	40	2	0	0	0	0.86409	1	3946	3946		25.126	7.2928	1	78750	+		16105	25506	11005	11014	18622	18622					0.18165308893526344
IEVSPVRF	8	Unmodified	_IEVSPVRF_					0	0	0			REV__nc|ENSG00000105227|Q9BXM0-3|PRX	REV__nc|ENSG00000105227|Q9BXM0-3|PRX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.7716369628906	2	473.77146	945.528367	0.017089	8.0964E-06	0.19875	9.4164E-05	0.21584	0.00010226	473.7712375268007	50.396	0.54918	50.393	50.106	50.655	-0.0020447					22	12	2	0	0	0	0.91977	1	4266	4266		45.952	3.5558	1	110500	+		16106	17516	11006	11015	18623	18623					0.053423752771550426
IEVVKPPSTQY	11	Unmodified	_IEVVKPPSTQY_					0	0	0			REV__nc|ENSG00000127603|Q9UPN3|MACF1	REV__nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	630.8496704101562	2	630.845353	1259.67615	2.85	0.0017979	4.1206	0.0025995	6.9706	0.0043974	630.8477214787887	110.77	1.3958	110.74	110.48	111.87	-0.026314					127	46	4	0	0	0	0.70737	1	12291	12291		30.318	1.1477	1	751460	+		16107	18743	11007	11016	18624	18624					0.05670222020489746
IEWIILDVKKP	11	Unmodified	_IEWIILDVKKP_					0	0	0			REV__ENSG00000121057|ENST00000337714|AKAP1	REV__ENSG00000121057|ENST00000337714|AKAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9434814453125	3	451.942868	1352.80677	-0.094243	-4.2593E-05	1.2047	0.00054444	1.1104	0.00050185	451.9433078192179	55.499	2.0176	55.489	54.191	56.208	-0.010136					136	62	4	0	0	0	0.77803	1	4942	4942		15.921	2.9632	1	381010	+		16108	18443	11008	11017	18625	18625					0.14448237739316028
IEWIILDVKKP	11	Unmodified	_IEWIILDVKKP_					0	0	0			REV__ENSG00000121057|ENST00000337714|AKAP1	REV__ENSG00000121057|ENST00000337714|AKAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9436950683594	3	451.942868	1352.80677	-0.61036	-0.00027585	1.6407	0.00074149	1.0303	0.00046564	451.94349825987973	55.257	1.4276	55.22	54.668	56.095	-0.036823					123	46	4	0	0	0	0.73647	1	4648	4648		25.068	0.79185	1	459960	+		16109	18443	11008	11017	18626	18626					0.14448237739316028
IEYKRAKRAS	10	Unmodified	_IEYKRAKRAS_					0	0	0			REV__ENST00000481652.1_1_1:114242829-114248598:-|nuORF	REV__ENST00000481652.1_1_1:114242829-114248598:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.8577270507812	2	611.356754	1220.69895	-0.22744	-0.00013904	-0.12961	-7.924E-05	-0.35705	-0.00021828	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.86348	1	9762	9762		31.53	1.2121	1	8715400	+		16110	18227	11009	11018	18627	18627					0.09743285928607293
IEYKRAKRAS	10	Unmodified	_IEYKRAKRAS_					0	0	0			REV__ENST00000481652.1_1_1:114242829-114248598:-|nuORF	REV__ENST00000481652.1_1_1:114242829-114248598:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.35498046875	2	611.356754	1220.69895	2.4219	0.0014807	-3.0766	-0.0018809	-0.65465	-0.00040023	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.86348	2	10336	10336;10453		31.53	5.9558	1	12656000	+		16111	18227	11009	11018	18628;18629	18628					0.09743285928607293
IEYKRAKRAS	10	Unmodified	_IEYKRAKRAS_					0	0	0			REV__ENST00000481652.1_1_1:114242829-114248598:-|nuORF	REV__ENST00000481652.1_1_1:114242829-114248598:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3621826171875	2	611.356754	1220.69895	1.142	0.00069816	-1.5619	-0.00095487	-0.4199	-0.00025671	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.86763	1	9886	9886		26.693	0.62953	1	17478000	+		16112	18227	11009	11018	18630	18630					0.09743285928607293
IFAAAGLLLLL	11	Unmodified	_IFAAAGLLLLL_					0	0	0		ENSG00000164220|ENST00000296641|F2RL2	ENSG00000164220|ENST00000296641|F2RL2	ENSG00000164220|ENST00000296641|F2RL2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	557.8703002929688	2	557.86536	1113.71617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.9	1	113.9	113.4	114.4	0.0011978								0	0	0	0.56276	1	13746	13746		11.511	0.64546	1				16113	5940	11010	11019	18631	18631					0.16385813481724654
IFAIAVFVV	9	Unmodified	_IFAIAVFVV_					0	0	0			REV__ENSG00000163162|ENST00000295317|RNF149	REV__ENSG00000163162|ENST00000295317|RNF149	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.7425231933594	2	489.804771	977.59499	-0.39462	-0.00019329	4.4639	0.0021865	4.0693	0.0019932	489.8077247729011	79.057	0.38257	79.468	79.269	79.651	0.4106					9	8	2	0	0	0	0.20789	1	9017	9017		21.702	0	1	24871	+		16114	20888	11011	11020	18632	18632					0.105296108390462
IFALVIIFTMK	11	Unmodified	_IFALVIIFTMK_					0	0	0			REV__ENSG00000180914|ENST00000316793|OXTR	REV__ENSG00000180914|ENST00000316793|OXTR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3941040039062	2	648.393428	1294.7723	-1.1411	-0.00073988	-0.51234	-0.0003322	-1.6534	-0.0010721	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.78658	1	12768	12768		14.137	0	1	2297700	+		16115	22425	11012	11021	18633	18633					0.13670698326859565
IFAMTKKTTKV	11	Unmodified	_IFAMTKKTTKV_					0	0	0			REV__ENST00000472013.1_1_1:42925643-42925775:+|nuORF	REV__ENST00000472013.1_1_1:42925643-42925775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.376220703125	2	634.375766	1266.73698	-0.13876	-8.8026E-05	1.7912	0.0011363	1.6524	0.0010482	634.3767849583303	112.54	0.33102	112.48	112.42	112.75	-0.063889					18	10	2	0	0	0	0.73893	1	12236	12236		24.519	0.99649	1	250970	+		16116	27250	11013	11022	18634	18634					0.11428035799031022
IFASFIFIL	9	Unmodified	_IFASFIFIL_					0	0	0			REV__nc|ENSG00000213439|P0C628|OR5AC1	REV__nc|ENSG00000213439|P0C628|OR5AC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	535.8145751953125	2	535.817879	1069.6212	0.82298	0.00044097	-1.439	-0.00077103	-0.616	-0.00033006	535.8173401968428	99.112	1.3531	99.268	98.814	100.17	0.15659					43	31	2	0	0	0	0.7932	1	10324	10324		26.796	0.10319	1	354400	+		16117	30199	11014	11023	18635	18635					0.08917880010517365
IFCSKKTG	8	Unmodified	_IFCSKKTG_					0	0	0		nc|ENSG00000170471|Q86X10-2|RALGAPB;nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;ENST00000461423.1_1_20:37137783-37175090:+|nuORF;nc|ENSG00000170471|Q86X10-4|RALGAPB	nc|ENSG00000170471|Q86X10-2|RALGAPB	nc|ENSG00000170471|Q86X10-2|RALGAPB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.240966796875	2	442.238938	882.463324	0.21245	9.3954E-05	4.1992	0.0018571	4.4117	0.001951	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.91977	1	9571	9571		45.952	1.8352	1	1030200			16118	6595	11015	11024	18636	18636					0.01739057479630901
IFDEAEKL	8	Unmodified	_IFDEAEKL_					0	0	0		nc|ENSG00000186283|Q9H497-3|TOR3A;ENSG00000186283|ENST00000367627|TOR3A;ENST00000472001.1_1_1:179057051-179060848:+|nuORF;ENST00000495145.1_1_1:179054938-179057273:+|nuORF;nc|ENSG00000186283|Q9H497-2|TOR3A	nc|ENSG00000186283|Q9H497-3|TOR3A	nc|ENSG00000186283|Q9H497-3|TOR3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.7522888183594	2	482.752933	963.491313	0.065899	3.1813E-05	-0.11857	-5.7241E-05	-0.052672	-2.5428E-05	482.7526780706168	52.41	0.66391	52.834	52.555	53.219	0.42348					34	15	3	0	0	0	0.42407	1	5232	5232		79.451	0	1	1503100			16119	7790	11016	11025	18637	18637					0.008106589407248066
IFDEAEKL	8	Unmodified	_IFDEAEKL_					0	0	0		nc|ENSG00000186283|Q9H497-3|TOR3A;ENSG00000186283|ENST00000367627|TOR3A;ENST00000472001.1_1_1:179057051-179060848:+|nuORF;ENST00000495145.1_1_1:179054938-179057273:+|nuORF;nc|ENSG00000186283|Q9H497-2|TOR3A	nc|ENSG00000186283|Q9H497-3|TOR3A	nc|ENSG00000186283|Q9H497-3|TOR3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.7534484863281	2	482.752933	963.491313	-0.28223	-0.00013625	0.3627	0.00017509	0.080465	3.8845E-05	482.75298908991147	52.107	0.90561	52.774	52.637	53.543	0.6673					39	21	3	0	0	0	0.36305	2	5234	5221;5234		84.916	2.6105	1	1486800			16120	7790	11016	11025	18638;18639	18639					0.008106589407248066
IFDGNVAHI	9	Unmodified	_IFDGNVAHI_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.2583312988281	2	493.258717	984.50288	-0.19088	-9.4156E-05	0.21955	0.00010829	0.028664	1.4139E-05	493.25860830538113	55.547	0.82933	55.948	55.53	56.359	0.40102					58	19	5	0	0	0	0.026451	4	5693	5682;5693;5704;5718		120.62	46.646	1	1605700			16121	5201	11017	11026	18640;18641;18642;18643	18641					0.010009007547182591
IFDGNVAHI	9	Unmodified	_IFDGNVAHI_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.25787353515625	2	493.258717	984.50288	0.031284	1.5431E-05	0.13321	6.5709E-05	0.1645	8.114E-05	493.2585321983302	55.326	0.79073	55.895	55.531	56.322	0.56836					53	18	5	0	0	0	0.062302	4	5694	5672;5682;5694;5707		102.77	26.782	1	1801000			16122	5201	11017	11026	18644;18645;18646;18647	18646					0.010009007547182591
IFDKFAIPGYL	11	Unmodified	_IFDKFAIPGYL_					0	0	0			REV__ENSG00000185448|ENST00000346193|FAM47A;REV__ENSG00000198173|ENST00000358047|FAM47C	REV__ENSG00000185448|ENST00000346193|FAM47A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.36328125	2	642.355357	1282.69616	7.1449	0.0045895	3.5151	0.0022579	10.66	0.0068475	642.3585751725324	110.49	1.1397	110.55	110.17	111.3	0.058884					162	41	4	0	0	0	0.64498	1	13492	13492		39.253	2.0937	1	2259100	+		16123	22766;23304	11018	11027	18648	18648					0.06612017751081112
IFDLLETN	8	Unmodified	_IFDLLETN_					0	0	0		nc|ENSG00000144452|Q86UK0-2|ABCA12;ENSG00000144452|ENST00000272895|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.75286865234375	2	482.752933	963.491313	0.065899	3.1813E-05	-0.11857	-5.7241E-05	-0.052672	-2.5428E-05	482.7526780706168	52.41	0.66391	52.834	52.555	53.219	0.42348					34	15	3	0	0	0	0.36381	2	5244	5244;5256		82.305	0	1	1503100			16124	4708	11019	11028	18649;18650	18649					0.00810658940713438
IFDLSEVL	8	Unmodified	_IFDLSEVL_					0	0	0		ENSG00000185650|ENST00000439696|ZFP36L1	ENSG00000185650|ENST00000439696|ZFP36L1	ENSG00000185650|ENST00000439696|ZFP36L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.2583923339844	2	468.257851	934.501149	1.2763	0.00059762	-1.063	-0.00049777	0.21324	9.9852E-05	468.2572045606824	99.029	2.0924	99.391	99.016	101.11	0.36137					103	52	4	0	0	0	0.10112	3	11923	11923;11934;11947		119.22	17.674	1	3431000			16125	7731	11020	11029	18651;18652;18653	18651					0.031278469460858105
IFDLSEVL	8	Unmodified	_IFDLSEVL_					0	0	0		ENSG00000185650|ENST00000439696|ZFP36L1	ENSG00000185650|ENST00000439696|ZFP36L1	ENSG00000185650|ENST00000439696|ZFP36L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.25762939453125	2	468.257851	934.501149	1.2711	0.00059521	-1.0589	-0.00049582	0.21224	9.9384E-05	468.2571965377802	99.097	1.615	99.46	99.055	100.67	0.36292					90	40	3	0	0	0	0.12901	5	11982	11972;11982;11995;12007;12020		114.59	18.538	1	3646500			16126	7731	11020	11029	18654;18655;18656;18657;18658	18655					0.031278469460858105
IFDVGALL	8	Unmodified	_IFDVGALL_					0	0	0		ENSG00000184922|ENST00000331495|FMNL1;nc|ENSG00000184922|O95466-2|FMNL1;nc|ENSG00000184922|O95466-3|FMNL1;ENST00000587856.1_1_17:43311355-43318139:+|nuORF	ENSG00000184922|ENST00000331495|FMNL1	ENSG00000184922|ENST00000331495|FMNL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.25030517578125	2	424.249829	846.485105	1.7473	0.00074129	-1.6476	-0.000699	0.099682	4.229E-05	424.24914320373654	97.534	1.7612	97.919	97.159	98.92	0.38548					75	42	3	0	0	0	0.37014	2	11736	11719;11736		86.935	12.418	1	775170			16127	7654	11021	11030	18659;18660	18660					0.055721854998637355
IFDVGALL	8	Unmodified	_IFDVGALL_					0	0	0		ENSG00000184922|ENST00000331495|FMNL1;nc|ENSG00000184922|O95466-2|FMNL1;nc|ENSG00000184922|O95466-3|FMNL1;ENST00000587856.1_1_17:43311355-43318139:+|nuORF	ENSG00000184922|ENST00000331495|FMNL1	ENSG00000184922|ENST00000331495|FMNL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.25079345703125	2	424.249829	846.485105	1.3768	0.0005841	-1.2001	-0.00050916	0.17665	7.4942E-05	424.2492891038276	97.642	1.717	98.033	97.562	99.279	0.39065					73	41	3	0	0	0	0.37014	2	11800	11775;11800		86.935	21.037	1	964290			16128	7654	11021	11030	18661;18662	18662					0.055721854998637355
IFEGGATELY	10	Unmodified	_IFEGGATELY_					0	0	0		ENST00000461873.5_1_10:103870189-103870671:-|nuORF;nc|ENSG00000198728|Q86U70-3|LDB1;nc|ENSG00000198728|Q86U70-2|LDB1;ENSG00000198728|ENST00000673968|LDB1	ENST00000461873.5_1_10:103870189-103870671:-|nuORF	ENST00000461873.5_1_10:103870189-103870671:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.2699584960938	2	550.268947	1098.52334	-0.70267	-0.00038666	1.2095	0.00066556	0.50686	0.00027891	550.269489439067	66.879	0.37395	66.932	66.76	67.134	0.052368					26	15	2	0	0	0	0.74274	1	5946	5946		42.396	3.3746	1	113870			16129	8316	11022	11031	18663	18663					-0.021979733761327225
IFESPPELPKS	11	Unmodified	_IFESPPELPKS_					0	0	0			REV__ENSG00000150394|ENST00000577390|CDH8	REV__ENSG00000150394|ENST00000577390|CDH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3357543945312	2	622.332079	1242.6496	2.9643	0.0018448	3.9682	0.0024696	6.9326	0.0043144	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.73893	1	12285	12285		24.519	1.9395	1	435720	+		16130	20208	11023	11032	18664	18664					0.037985331291110924
IFFEPKILYRA	11	Unmodified	_IFFEPKILYRA_					0	0	0		ENSG00000083123|ENST00000320393|BCKDHB	ENSG00000083123|ENST00000320393|BCKDHB	ENSG00000083123|ENST00000320393|BCKDHB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2328796386719	3	466.271096	1395.79146	0.32932	0.00015355	4.0979	0.0019107	4.4272	0.0020643	466.2729394643504	67.873	0.9558	68.258	67.908	68.864	0.38482					68	22	4	0	0	0	0.14789	1	7427	7427		70.399	0	1	1169300			16131	1497	11024	11033	18665	18665					0.10939370942151072
IFFFCQVL	8	Unmodified	_IFFFCQVL_					0	0	0			REV__ENSG00000174937|ENST00000641993|OR5M3	REV__ENSG00000174937|ENST00000641993|OR5M3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2838134765625	2	508.767332	1015.52011	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.998	1	67.549	67.049	68.049	0.55071								0	0	0	0.29694	1	7349	7349		37.028	0.58173	1		+		16132	22026	11025	11034	18666	18666					0.012971050361443304
IFFLMPKSLI	10	Unmodified	_IFFLMPKSLI_					0	0	0			REV__ENSG00000102802|ENST00000380482|MEDAG	REV__ENSG00000102802|ENST00000380482|MEDAG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.8578491210938	2	604.859221	1207.70389	-1.0601	-0.00064122	-0.60091	-0.00036347	-1.661	-0.0010047	604.8590287609827	81.871	2.3278	81.986	81.043	83.371	0.11426					72	54	2	0	0	0	0.83456	1	7845	7845		32.812	0	1	398390	+		16133	17359	11026	11035	18667	18667					0.10834453747020234
IFFVLRKKT	9	Unmodified	_IFFVLRKKT_					0	0	0		ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.3692016601562	2	576.368601	1150.72265	-0.84105	-0.00048476	1.0308	0.00059413	0.18977	0.00010938	576.368982432761	42.622	0.86427	42.622	42.073	42.937	0.00016785					42	20	3	0	0	0	0.7932	1	3200	3200		21.96	8.1846	1	113190			16134	8220	11027	11036	18668	18668					0.153317514330638
IFFVLRKKT	9	Unmodified	_IFFVLRKKT_					0	0	0		ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	576.368601	1150.72265	-0.88038	-0.00050742	1.1553	0.0006659	0.27496	0.00015848	576.369090083585	42.545	0.7356	42.507	42.061	42.796	-0.038219	-0.057481	8.464E-05	NaN	21.96	36	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165230			16135	8220	11027	11036							0.153317514330638
IFFVPQDSIIV	11	Unmodified	_IFFVPQDSIIV_					0	0	0		ENSG00000188133|ENST00000342743|TMEM215	ENSG00000188133|ENST00000342743|TMEM215	ENSG00000188133|ENST00000342743|TMEM215	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	639.8671875	2	639.360639	1276.70673	1.5683	0.0010027	1.5076	0.00096391	3.0759	0.0019666	639.3615226756846	110.32	0.45279	110.44	110.27	110.72	0.11659					20	12	3	0	0	0	0.77937	1	11886	11886		15.642	0.77694	1	230740			16136	7907	11028	11037	18669	18669					0.07944000405495899
IFGEAPPRPS	10	Unmodified	_IFGEAPPRPS_					0	0	0			REV__ENSG00000156858|ENST00000300835|PRR14	REV__ENSG00000156858|ENST00000300835|PRR14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7872924804688	2	535.785099	1069.55564	-0.42023	-0.00022515	4.1469	0.0022219	3.7267	0.0019967	535.7871838143834	77.456	2.5646	78.024	77.453	80.018	0.56836					165	60	5	0	0	0	0.16557	1	8909	8909		93.143	5.3889	1	5869200	+		16137	20509	11029	11038	18670	18670					0.0236485881750923
IFGGGKRSN	9	Unmodified	_IFGGGKRSN_					0	0	0			REV__ENST00000504307.1_2_17:48249464-48258440:-|nuORF	REV__ENST00000504307.1_2_17:48249464-48258440:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.25616455078125	2	468.256508	934.498464	0.60478	0.00028319	-4.1932	-0.0019635	-3.5884	-0.0016803	468.25441943244317	81.627	3.5592	81.77	80.781	84.34	0.14352					144	82	2	0	0	0	0.74721	1	7910	7910		37.159	2.9866	1	205460	+		16138	27853	11030	11039	18671	18671					0.0285943633180068
IFGPEEVNS	9	Unmodified	_IFGPEEVNS_					0	0	0		ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.2373046875	2	496.24019	990.465826	-0.19806	-9.8285E-05	-3.6609	-0.0018167	-3.859	-0.001915	496.2381223206561	30.903	0.94662	30.856	30.347	31.293	-0.047064					49	24	3	0	0	0	0.76764	1	1728	1728		34.173	1.3601	1	221780			16139	5747	11031	11040	18672	18672					-0.029788155817072948
IFGPIFTLRN	10	Unmodified	_IFGPIFTLRN_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3432006835938	2	589.340041	1176.66553	2.472	0.0014569	2.3274	0.0013717	4.7995	0.0028285	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.8608	1	10181	10181		34.173	5.0025	1	16740000	+		16140	17968	11032	11041	18673	18673					0.08426284156712427
IFGPIFTLRN	10	Unmodified	_IFGPIFTLRN_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427124023438	2	589.340041	1176.66553	0.81285	0.00047905	3.7357	0.0022016	4.5485	0.0026806	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.8608	1	9272	9272		34.173	0	1	6450100	+		16141	17968	11032	11041	18674	18674					0.08426284156712427
IFGPLGGYVME	11	Unmodified	_IFGPLGGYVME_					0	0	0			REV__ENSG00000130054|ENST00000252338|NALF2	REV__ENSG00000130054|ENST00000252338|NALF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8092651367188	2	591.796817	1181.57908	0.54238	0.00032098	1.5401	0.00091143	2.0825	0.0012324	591.7980235749444	57.326	0.46886	57.882	57.684	58.153	0.55513					18	11	2	0	0	0	0.15416	1	6013	6013		58.782	7.4465	1	131830	+		16142	18845	11033	11042	18675	18675					-0.00444463460166844
IFGVDATLN	9	Unmodified	_IFGVDATLN_					0	0	0			REV__ENSG00000008952|ENST00000337002|SEC62	REV__ENSG00000008952|ENST00000337002|SEC62	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	475.1598205566406	2	475.2531	948.491647	-1.2777	-0.00060724	1.7743	0.00084324	0.49658	0.000236	475.252915850781	76.2	0.10678	76.289	76.211	76.318	0.089363					5	3	2	0	0	0	0.20789	1	7090	7090		17.365	16.16	1	19829	+		16143	16145	11034	11043	18676	18676					0.015340786605634094
IFHEQHQSIQ	10	Unmodified	_IFHEQHQSIQ_					0	0	0			REV__nc|ENSG00000119318|P54727-2|RAD23B	REV__nc|ENSG00000119318|P54727-2|RAD23B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.814697265625	2	633.814919	1265.61528	-0.40794	-0.00025856	0.43774	0.00027745	0.029802	1.8889E-05	633.8151815073458	76.07	0.77838	76.07	75.699	76.477	0					74	27	4	0	0	0	0.24002	1	6922	6922		87.696	16.88	1	231670	+		16144	18349	11035	11044	18677	18677					-0.006898702391026745
IFHEQHQSIQ	10	Unmodified	_IFHEQHQSIQ_					0	0	0			REV__nc|ENSG00000119318|P54727-2|RAD23B	REV__nc|ENSG00000119318|P54727-2|RAD23B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.814697265625	2	633.814919	1265.61528	0.41115	0.00026059	-0.35296	-0.00022371	0.058189	3.6881E-05	633.8146373815393	75.69	0.90498	75.736	75.32	76.224	0.046448					72	23	4	0	0	0	0.62712	1	7369	7369		52.937	17.785	1	489770	+		16145	18349	11035	11044	18678	18678					-0.006898702391026745
IFHEQHQSIQ	10	Unmodified	_IFHEQHQSIQ_					0	0	0			REV__nc|ENSG00000119318|P54727-2|RAD23B	REV__nc|ENSG00000119318|P54727-2|RAD23B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	633.814919	1265.61528	-0.14529	-9.2084E-05	0.26094	0.00016539	0.11565	7.3301E-05	633.8149735966152	75.845	0.79104	75.891	75.57	76.361	0.045952	0.082306	0.00047674	NaN	87.696	68	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	464100	+		16146	18349	11035	11044							-0.006898702391026745
IFHEQHQSIQ	10	Unmodified	_IFHEQHQSIQ_					0	0	0			REV__nc|ENSG00000119318|P54727-2|RAD23B	REV__nc|ENSG00000119318|P54727-2|RAD23B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	633.814919	1265.61528	1.4368	0.00091064	-1.3341	-0.00084557	0.10266	6.5066E-05	633.8140294216348	75.616	0.71219	75.741	75.4	76.112	0.12545	-0.066845	-0.0015452	NaN	87.696	50	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	376000	+		16147	18349	11035	11044							-0.006898702391026745
IFHEQHQSIQ	10	Unmodified	_IFHEQHQSIQ_					0	0	0			REV__nc|ENSG00000119318|P54727-2|RAD23B	REV__nc|ENSG00000119318|P54727-2|RAD23B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	633.814919	1265.61528	0.015602	9.8889E-06	0.5183	0.00032851	0.53391	0.0003384	633.8150165893252	75.36	0.673	75.755	75.321	75.994	0.39507	-0.053753	0.00080299	NaN	87.696	45	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	622500	+		16148	18349	11035	11044							-0.006898702391026745
IFHEQHQSIQ	10	Unmodified	_IFHEQHQSIQ_					0	0	0			REV__nc|ENSG00000119318|P54727-2|RAD23B	REV__nc|ENSG00000119318|P54727-2|RAD23B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	633.814919	1265.61528	1.0717	0.00067928	-0.83837	-0.00053137	0.23336	0.00014791	633.81429085978	75.173	0.6546	75.737	75.371	76.026	0.56458	-0.070992	-0.00091678	NaN	87.696	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	719340	+		16149	18349	11035	11044							-0.006898702391026745
IFIFELLG	8	Unmodified	_IFIFELLG_					0	0	0		ENSG00000204869|ENST00000377697|IGFL4	ENSG00000204869|ENST00000377697|IGFL4	ENSG00000204869|ENST00000377697|IGFL4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	475.86663818359375	2	476.281129	950.547705	0.15475	7.3702E-05	-0.43583	-0.00020758	-0.28108	-0.00013387	476.2820827490882	31.484	0.089542	31.596	31.536	31.625	0.11198					6	4	2	0	0	0	0.4196	1	1445	1445		37.028	12.524	1	29896			16150	8494	11036	11045	18679	18679					0.07045331568042457
IFIGSLGILSK	11	Unmodified	_IFIGSLGILSK_					0	0	0			REV__nc|ENSG00000092931|O43934-2|MFSD11	REV__nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3565063476562	2	574.357899	1146.70125	-1.0357	-0.00059487	-2.3996	-0.0013783	-3.4354	-0.0019731	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.70737	1	10720	10720		30.318	3.6248	1	715310	+		16151	17041	11037	11046	18680	18680					0.1337632161369129
IFIRVIDL	8	Unmodified	_IFIRVIDL_					0	0	0		ENST00000463884.1_1_X:153555730-153558035:+|nuORF;nc|ENSG00000007350|P51854-4|TKTL1;nc|ENSG00000007350|P51854-1|TKTL1;ENSG00000007350|ENST00000369915|TKTL1	ENST00000463884.1_1_X:153555730-153558035:+|nuORF	ENST00000463884.1_1_X:153555730-153558035:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.8135070800781	2	494.813128	987.611703	-0.073853	-3.6543E-05	-0.95004	-0.00047009	-1.0239	-0.00050664	494.81254795898263	109.92	0.54116	109.87	109.66	110.2	-0.055084					41	26	2	0	0	0	0.4196	1	11983	11983		26.796	0	1	506630			16152	726	11038	11047	18681	18681					0.11740111724986946
IFKEFPYF	8	Unmodified	_IFKEFPYF_					0	0	0		ENSG00000162669|ENST00000370425|HFM1;ENST00000481900.5_1_1:91844026-91850765:-|nuORF	ENSG00000162669|ENST00000370425|HFM1	ENSG00000162669|ENST00000370425|HFM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.1602172851562	2	545.784036	1089.55352	-2.2466	-0.0012261	2.63	0.0014354	0.38345	0.00020928	545.7853921486134	42.351	0.48219	42.784	42.565	43.047	0.4334					14	11	2	0	0	0	0.4196	1	3787	3787		29.15	0	1	179360			16153	5715	11039	11048	18682	18682					0.012324300796990428
IFKKTNRLFRR	11	Unmodified	_IFKKTNRLFRR_					0	0	0			REV__nc|ENSG00000164362|O14746-4|TERT	REV__nc|ENSG00000164362|O14746-4|TERT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.6380615234375	3	493.640405	1477.89939	-0.93941	-0.00046373	-1.8317	-0.00090419	-2.7711	-0.0013679	493.97372367616185	15.801	0.17871	15.718	15.628	15.806	-0.083363					10	7	2	0	0	0	0.80813	1	79	79		9.6461	0.43434	1	77624	+		16154	21076	11040	11049	18683	18683					0.17955180316039332
IFKLKNPIK	9	Unmodified	_IFKLKNPIK_					0	0	0		ENSG00000157259|ENST00000287957|GATAD1	ENSG00000157259|ENST00000287957|GATAD1	ENSG00000157259|ENST00000287957|GATAD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	551.0283203125	2	550.863152	1099.71175	0.93584	0.00051552	-0.87657	-0.00048287	0.059271	3.265E-05	550.8626706690346	16.052	0.25302	16.028	15.887	16.14	-0.024035					12	10	2	0	0	0	0.20789	1	91	91		37.159	18.835	1	58761			16155	5420	11041	11050	18684	18684					0.16588349058793028
IFLAATNLP	9	Unmodified	_IFLAATNLP_					0	0	0			REV__ENST00000512393.1_1_4:47582447-47584942:+|nuORF	REV__ENST00000512393.1_1_4:47582447-47584942:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2812194824219	2	480.28166	958.548768	1.0992	0.00052791	-2.6116	-0.0012543	-1.5124	-0.00072638	480.2802815297023	99.288	1.3371	99.651	99.251	100.59	0.36292					88	33	4	0	0	0	0.58668	1	11991	11991		47.657	3.1263	1	8963900	+		16156	19934	11042	11051	18685	18685					0.06783545936934843
IFLFLVIASLN	11	Unmodified	_IFLFLVIASLN_					0	0	0			REV__ENSG00000129667|ENST00000675367|RHBDF2	REV__ENSG00000129667|ENST00000675367|RHBDF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2590026855469	3	417.256675	1248.7482	-0.40521	-0.00016908	4.4891	0.0018731	4.0839	0.001704	417.25848575435583	15.901	0.25422	15.821	15.726	15.98	-0.080017					19	11	3	0	0	0	0.77205	1	65	65		17.167	4.2093	1	113160	+		16157	18829	11043	11052	18686	18686					0.13377181164855756
IFLKLFKLIR	10	Unmodified	_IFLKLFKLIR_					0	0	0			REV__ENST00000546531.5_1_12:49396684-49399341:-|nuORF	REV__ENST00000546531.5_1_12:49396684-49399341:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.9620666503906	3	430.960193	1289.85875	-1.1979	-0.00051624	1.5777	0.00067995	0.37987	0.00016371	430.96070559366615	40.578	1.0757	41.167	40.797	41.872	0.58915					92	30	5	0	0	0	0.91645	1	3470	3470		6.6596	0.65857	1	17366000	+		16158	22488	11044	11053	18687	18687					0.22541445943738836
IFLLLFSIVA	10	Unmodified	_IFLLLFSIVA_					0	0	0			REV__ENSG00000121377|ENST00000240687|TAS2R7	REV__ENSG00000121377|ENST00000240687|TAS2R7	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.36376953125	2	568.359911	1134.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.14	1	116.14	115.64	116.64	0								0	0	0	0.45132	1	11918	11918		12.207	0.69583	1		+		16159	18453	11045	11054	18688	18688					0.14330411107403052
IFLNIVILFVY	11	Unmodified	_IFLNIVILFVY_					0	0	0			REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF	REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.94329833984375	3	451.944209	1352.8108	-0.67633	-0.00030566	-1.5611	-0.00070551	-2.2374	-0.0010112	451.94335598806316	53.501	2.9355	53.476	51.367	54.303	-0.024754					205	72	4	0	0	0	0.78683	1	4803	4803		14.086	1.1285	1	765750	+		16160	17656	11046	11055	18689	18689					0.14850327233034477
IFLPLTTA	8	Unmodified	_IFLPLTTA_					0	0	0		nc|ENSG00000205696|A8MUL3|ADARB2-AS1	nc|ENSG00000205696|A8MUL3|ADARB2-AS1	nc|ENSG00000205696|A8MUL3|ADARB2-AS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2613220214844	2	438.265479	874.516405	-1.5666	-0.00068658	-3.1125	-0.0013641	-4.6791	-0.0020507	438.2640033133023	45.783	1.2838	45.798	45.032	46.315	0.015511					49	34	2	0	0	0	0.88915	1	3227	3227		35.201	8.4046	1	101570			16161	15221	11047	11056	18690	18690					0.07412758533928354
IFLVKRFKWID	11	Unmodified	_IFLVKRFKWID_					0	0	0			REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	488.9622802734375	3	488.962374	1463.86529	0.07066	3.455E-05	0.006158	3.011E-06	0.076818	3.7561E-05	488.9623700287033	16.457	0.63214	16.517	16.397	17.029	0.059269					64	26	4	0	0	0	0.80593	1	156	156		10.104	0	1	1644100	+		16162	18297	11048	11057	18691	18691					0.1519133910446726
IFMKKRTK	8	Unmodified	_IFMKKRTK_					0	0	0		nc|ENSG00000167889|Q3V5L5-5|MGAT5B;ENSG00000167889|ENST00000569840|MGAT5B;nc|ENSG00000167889|Q3V5L5-2|MGAT5B;chr17:76932775-76937988|40|17.18|0.82|4.39|+|ENST00000428789|MGAT5B,MGAT5B;ENST00000374998.3_1_17:74865111-74909907:+|nuORF	nc|ENSG00000167889|Q3V5L5-5|MGAT5B	nc|ENSG00000167889|Q3V5L5-5|MGAT5B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.2814331054688	2	526.325879	1050.63721	-0.43397	-0.00022841	-1.2827	-0.0006751	-1.7166	-0.00090351	526.3250946135054	62.917	0.38163	62.945	62.715	63.097	0.028133					24	16	2	0	0	0	0.4196	1	5871	5871		26.796	19.106	1	57690			16163	244	11049	11058	18692	18692					0.11391262975757854
IFNGGRGIVV	10	Unmodified	_IFNGGRGIVV_					0	0	0		nc|ENSG00000138081|Q86XK2-2|FBXO11	nc|ENSG00000138081|Q86XK2-2|FBXO11	nc|ENSG00000138081|Q86XK2-2|FBXO11	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.302490234375	2	516.303458	1030.59236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.634	1	62.634	62.134	63.134	0								0	0	0	0.45132	1	5475	5475		30.504	2.6214	1				16164	14951	11050	11059	18693	18693					0.07829155434069435
IFNRISVSE	9	Unmodified	_IFNRISVSE_					0	0	0		ENSG00000128016|ENST00000597629|ZFP36	ENSG00000128016|ENST00000597629|ZFP36	ENSG00000128016|ENST00000597629|ZFP36	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.7457275390625	2	532.790381	1063.56621	0.60529	0.00032249	-2.8923	-0.001541	-2.287	-0.0012185	533.2896189163502	49.837	1.303	50.682	50.074	51.377	0.845					57	31	3	0	0	0	0.20789	1	4931	4931		29.15	0	1	412030			16165	3526	11051	11060	18694	18694					0.036968414719467546
IFNTSVSI	8	Unmodified	_IFNTSVSI_					0	0	0			REV__ENST00000549988.5_1_12:76453547-76478450:-|nuORF	REV__ENST00000549988.5_1_12:76453547-76478450:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.2679748535156	2	440.742368	879.470183	-0.0073515	-3.2401E-06	0.51188	0.00022561	0.50453	0.00022237	440.7423549331303	70.113	0.62321	70.66	70.383	71.007	0.54693					25	15	2	0	0	0	0.4196	1	7791	7791		82.305	21.333	1	246470	+		16166	28589	11052	11061	18695	18695					0.025626936318644766
IFNTSVSI	8	Unmodified	_IFNTSVSI_					0	0	0			REV__ENST00000549988.5_1_12:76453547-76478450:-|nuORF	REV__ENST00000549988.5_1_12:76453547-76478450:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	440.742368	879.470183	-0.57928	-0.00025531	0.39508	0.00017413	-0.1842	-8.1185E-05	440.74251697021424	70.247	0.64626	70.631	70.311	70.957	0.38416	-0.014465	-5.2491E-05	NaN	82.305	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183200	+		16167	28589	11052	11061							0.025626936318644766
IFPDSARLP	9	Unmodified	_IFPDSARLP_					0	0	0		ENSG00000176009|ENST00000531618|ASCL3	ENSG00000176009|ENST00000531618|ASCL3	ENSG00000176009|ENST00000531618|ASCL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2793273925781	2	508.282192	1014.54983	-0.88176	-0.00044818	-2.9285	-0.0014885	-3.8102	-0.0019367	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.77546	1	8734	8734		31.955	0.42505	1	1261800			16168	7049	11053	11062	18696	18696					0.04313760305853975
IFPQNAAS	8	Unmodified	_IFPQNAAS_					0	0	0		ENST00000578270.5_1_18:19239172-19243683:-|nuORF	ENST00000578270.5_1_18:19239172-19243683:-|nuORF	ENST00000578270.5_1_18:19239172-19243683:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.218505859375	2	424.21906	846.423567	-0.1837	-7.7928E-05	-1.1351	-0.00048152	-1.3188	-0.00055944	424.2185287134354	101.66	1.8082	101.68	101.04	102.85	0.01989					87	43	4	0	0	0	0.85277	1	10830	10830		25.45	0.93098	1	1878300			16169	14078	11054	11063	18697	18697					-0.005787461994373189
IFQEQDPSKI	10	Unmodified	_IFQEQDPSKI_					0	0	0		ENST00000425487.2_1_X:46299833-46299950:-|nuORF	ENST00000425487.2_1_X:46299833-46299950:-|nuORF	ENST00000425487.2_1_X:46299833-46299950:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.816162109375	2	602.814053	1203.61355	-0.0015417	-9.2935E-07	3.0295	0.0018262	3.028	0.0018253	602.8158843466734	66.445	0.52135	66.41	66.226	66.748	-0.035217					38	24	2	0	0	0	0.42808	1	6364	6364		58.23	0	1	141940			16170	11535	11055	11064	18698	18698					0.01989075952269559
IFQVNSFIN	9	Unmodified	_IFQVNSFIN_					0	0	0			REV__ENST00000515518.6_1_5:109760554-109978041:-|nuORF	REV__ENST00000515518.6_1_5:109760554-109978041:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.2874145507812	2	541.287474	1080.5604	-0.80121	-0.00043369	1.2657	0.00068511	0.46449	0.00025142	541.2879299434815	70.479	0.87196	70.864	70.506	71.378	0.38416					58	20	4	0	0	0	0.30689	1	7791	7791		64.207	14.766	1	870440	+		16171	22892	11056	11065	18699	18699					0.023337429602861448
IFRALGTPN	9	Unmodified	_IFRALGTPN_					0	0	0		nc|ENSG00000170312|P06493-2|CDK1;chr10:60785787-60791890|60|14.03|0.51|4.79|+|ENST00000373809|CDK1,CDK1;ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|60|17.03|0.53|5.01|+|ENST00000448257|CDK1,CDK1	nc|ENSG00000170312|P06493-2|CDK1	nc|ENSG00000170312|P06493-2|CDK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7802734375	2	494.782359	987.550165	-0.85772	-0.00042438	-3.1278	-0.0015476	-3.9855	-0.001972	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.76764	1	8853	8853		34.173	3.8548	1	737700			16172	78	11057	11066	18700	18700					0.0558918002569726
IFRKTFSK	8	Unmodified	_IFRKTFSK_					0	0	0			REV__ENSG00000142156|ENST00000361866|COL6A1	REV__ENSG00000142156|ENST00000361866|COL6A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8092651367188	2	513.808377	1025.6022	0.37872	0.00019459	0.75131	0.00038603	1.13	0.00058062	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.89494	1	4145	4145		37.159	2.9866	1	971720	+		16173	19723	11058	11067	18701	18701					0.09042343439477918
IFSHTHIYLL	10	Unmodified	_IFSHTHIYLL_					0	0	0		nc|ENSG00000135114|Q15646-3|OASL;ENSG00000135114|ENST00000257570|OASL	nc|ENSG00000135114|Q15646-3|OASL	nc|ENSG00000135114|Q15646-3|OASL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3464965820312	2	622.345323	1242.67609	2.2592	0.001406	-0.5993	-0.00037297	1.6599	0.0010331	622.3450020425241	96.156	1.7473	96.1	95.227	96.974	-0.056381					109	40	3	0	0	0	0.85934	1	10291	10291		35.618	6.4482	1	421260			16174	3985	11059	11068	18702	18702					0.06446266811144596
IFSICCMSS	9	Unmodified	_IFSICCMSS_					0	0	0		ENST00000428135.7_1_7:17831871-17832039:-|nuORF	ENST00000428135.7_1_7:17831871-17832039:-|nuORF	ENST00000428135.7_1_7:17831871-17832039:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7865295410156	2	495.708299	989.402045	-1.641	-0.00081347	-4.1951	-0.0020795	-5.8361	-0.002893	495.70590370826324	43.91	0.41128	44.684	44.463	44.875	0.77379					16	9	2	0	0	0	0.20789	1	3989	3989		16.473	0	1	186170			16175	11591	11060	11069	18703	18703					-0.0930795860631406
IFSSYFVY	8	Unmodified	_IFSSYFVY_					0	0	0		nc|ENSG00000053918|P51787-2|KCNQ1;ENSG00000053918|ENST00000155840|KCNQ1	nc|ENSG00000053918|P51787-2|KCNQ1	nc|ENSG00000053918|P51787-2|KCNQ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.2495727539062	2	513.252569	1024.49058	0.206	0.00010573	-4.1734	-0.002142	-3.9674	-0.0020363	513.2504117971379	71.021	0.94449	71.568	71.166	72.11	0.54756					58	22	4	0	0	0	0.92176	1	7943	7943		46.766	4.3703	1	938560			16176	1013	11061	11070	18704	18704					-0.020681357083276453
IFSVWVGSS	9	Unmodified	_IFSVWVGSS_					0	0	0			REV__ENST00000598734.1_1_19:39421606-39422228:+|nuORF	REV__ENST00000598734.1_1_19:39421606-39422228:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	490.2672424316406	2	491.255643	980.496732	-1.5019	-0.0007378	1.2913	0.00063434	-0.21061	-0.00010347	491.2557788101612	84.019	1.1729	84.157	83.525	84.698	0.13811					37	26	2	0	0	0	0.20789	1	8177	8177		24.203	18.282	1	40772	+		16177	29288	11062	11071	18705	18705					0.0057038252319898675
IFSYVIFLH	9	Unmodified	_IFSYVIFLH_					0	0	0		ENSG00000279514|ENST00000623907|OR4C16	ENSG00000279514|ENST00000623907|OR4C16	ENSG00000279514|ENST00000623907|OR4C16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.8162231445312	2	569.81841	1137.62227	-1.0016	-0.00057072	-1.2012	-0.00068449	-2.2028	-0.0012552	569.8176061903462	58.45	1.0406	58.45	57.91	58.951	0					67	44	2	0	0	0	0.7932	1	5051	5051		25.45	3.4903	1	76918			16178	9045	11063	11072	18706	18706					0.05896094379409078
IFTNEPLLGD	10	Unmodified	_IFTNEPLLGD_					0	0	0			REV__ENST00000497281.5_1_X:153763381-153774262:-|nuORF	REV__ENST00000497281.5_1_X:153763381-153774262:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	559.7899169921875	2	559.790047	1117.56554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.229	1	73.358	72.858	73.858	0.1292								0	0	0	0.45132	1	6736	6736		39.253	2.8061	1		+		16179	20701	11064	11073	18707	18707					0.01146002032260185
IFTRIVVSR	9	Unmodified	_IFTRIVVSR_					0	0	0			REV__ENSG00000163655|ENST00000496455|GMPS	REV__ENSG00000163655|ENST00000496455|GMPS	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3569946289062	2	545.840208	1089.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.06	1	113.99	113.49	114.49	-0.07								0	0	0	0.33676	1	12347	12347		18.324	3.4595	1		+		16180	20954	11065	11074	18708	18708					0.12461703876556385
IFTSAVFLRL	10	Unmodified	_IFTSAVFLRL_					0	0	0		ENST00000468285.1_1_10:76973815-76980729:+|nuORF	ENST00000468285.1_1_10:76973815-76980729:+|nuORF	ENST00000468285.1_1_10:76973815-76980729:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.3511352539062	2	583.850242	1165.68593	-0.060239	-3.517E-05	-2.0725	-0.00121	-2.1327	-0.0012452	583.8487974044637	17.016	0.26148	16.406	16.305	16.567	-0.6107					9	5	2	0	0	0	0.85934	1	212	212		35.618	0	1	59768			16181	12173	11066	11075	18709	18709					0.1097145481651296
IFTTAAVVLGK	11	Unmodified	_IFTTAAVVLGK_					0	0	0		ENSG00000113319|ENST00000265080|RASGRF2	ENSG00000113319|ENST00000265080|RASGRF2	ENSG00000113319|ENST00000265080|RASGRF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3409423828125	2	560.342249	1118.66995	-1.4184	-0.00079481	-2.1655	-0.0012134	-3.584	-0.0020082	560.3409019697357	89.331	3.0544	89.504	87.698	90.752	0.17234					137	71	4	0	0	0	0.43778	1	8845	8845		56.434	15.007	1	613340			16182	2714	11067	11076	18710	18710					0.11535748579603933
IFTTAAVVLGK	11	Unmodified	_IFTTAAVVLGK_					0	0	0		ENSG00000113319|ENST00000265080|RASGRF2	ENSG00000113319|ENST00000265080|RASGRF2	ENSG00000113319|ENST00000265080|RASGRF2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	560.342249	1118.66995	1.4125	0.0007915	-4.7931	-0.0026858	-3.3805	-0.0018943	560.3394435206833	89.174	0.87046	89.625	89.242	90.113	0.45058	0.028058	-0.0011177	NaN	56.434	49	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	577310			16183	2714	11067	11076							0.11535748579603933
IFTVEERVL	9	Unmodified	_IFTVEERVL_					0	0	0			REV__ENST00000586479.1_1_19:11462501-11464130:+|nuORF	REV__ENST00000586479.1_1_19:11462501-11464130:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3161010742188	2	553.316232	1104.61791	-0.45835	-0.00025361	1.0333	0.00057176	0.57498	0.00031814	553.316772900447	75.139	1.0421	75.534	75.279	76.321	0.39507					55	24	4	0	0	0	0.14386	1	8513	8513		84.916	9.8722	1	1004000	+		16184	22603	11068	11077	18711	18711					0.06978585165848017
IFVGKGNALI	10	Unmodified	_IFVGKGNALI_					0	0	0			REV__ENST00000541337.5_1_5:139227204-139227366:-|nuORF	REV__ENST00000541337.5_1_5:139227204-139227366:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3142700195312	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86718	1	12286	12286		27.882	2.3082	1	4038100	+		16185	28481	11069	11078	18712	18712					0.10343210236646883
IFVINRVTG	9	Unmodified	_IFVINRVTG_					0	0	0		ENST00000291574.8_1_21:45472329-45475604:+|nuORF	ENST00000291574.8_1_21:45472329-45475604:+|nuORF	ENST00000291574.8_1_21:45472329-45475604:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8034362792969	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.7932	1	8294	8294		25.45	3.4903	1	1874600			16186	9683	11070	11079	18713	18713					0.08902039576855714
IFVINRVTG	9	Unmodified	_IFVINRVTG_					0	0	0		ENST00000291574.8_1_21:45472329-45475604:+|nuORF	ENST00000291574.8_1_21:45472329-45475604:+|nuORF	ENST00000291574.8_1_21:45472329-45475604:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8036193847656	2	509.805834	1017.59712	-0.37726	-0.00019233	-3.8339	-0.0019545	-4.2111	-0.0021469	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.7932	2	8447	8447;8566		25.45	3.4903	1	3415500			16187	9683	11070	11079	18714;18715	18714					0.08902039576855714
IFVINRVTG	9	Unmodified	_IFVINRVTG_					0	0	0		ENST00000291574.8_1_21:45472329-45475604:+|nuORF	ENST00000291574.8_1_21:45472329-45475604:+|nuORF	ENST00000291574.8_1_21:45472329-45475604:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8037414550781	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.78058	3	8440	8440;8476;8621		30.504	1.2474	1	2989000			16188	9683	11070	11079	18716;18717;18718	18716					0.08902039576855714
IFVINRVTG	9	Unmodified	_IFVINRVTG_					0	0	0		ENST00000291574.8_1_21:45472329-45475604:+|nuORF	ENST00000291574.8_1_21:45472329-45475604:+|nuORF	ENST00000291574.8_1_21:45472329-45475604:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8037109375	2	509.805834	1017.59712	0.31699	0.0001616	-4.4775	-0.0022826	-4.1605	-0.002121	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.72402	1	10029	10029		38.806	5.9937	1	2635100			16189	9683	11070	11079	18719	18719					0.08902039576855714
IFVMRLAKQ	9	Unmodified	_IFVMRLAKQ_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3323364257812	2	553.331162	1104.64777	1.2853	0.00071117	0.9147	0.00050613	2.2	0.0012173	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.7932	1	10382	10382		21.96	0	1	4524400			16190	9032	11071	11080	18720	18720					0.09963245630206075
IFVRKGQL	8	Unmodified	_IFVRKGQL_					0	0	0			REV__ENST00000417692.1_1_2:48134096-48134625:+|nuORF	REV__ENST00000417692.1_1_2:48134096-48134625:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8009948730469	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.86288	1	9652	9652		26.796	1.3459	1	17379000	+		16191	26449	11072	11081	18721	18721					0.1102236078503438
IFVVSELPD	9	Unmodified	_IFVVSELPD_					0	0	0			REV__ENSG00000247596|ENST00000305533|TWF2	REV__ENSG00000247596|ENST00000305533|TWF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.7754211425781	2	509.776408	1017.53826	-1.7143	-0.0008739	-2.0836	-0.0010622	-3.7979	-0.0019361	509.77528861020255	36.905	0.62648	36.916	36.704	37.33	0.011173					20	13	2	0	0	0	0.58151	1	2452	2452		47.916	0	1	127780	+		16192	23857	11073	11082	18722	18722					0.030195184918625273
IFYGLIPSGG	10	Unmodified	_IFYGLIPSGG_					0	0	0			REV__nc|ENSG00000101605|P52179-2|MYOM1;REV__nc|ENSG00000196091|Q00872-5|MYBPC1	REV__nc|ENSG00000101605|P52179-2|MYOM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.281494140625	2	512.279118	1022.54368	-0.052063	-2.6671E-05	4.432	0.0022704	4.3799	0.0022437	512.2812910993212	86.454	3.487	86.521	85.51	88.997	0.067436					149	81	2	0	0	0	0.67608	1	8760	8760		45.952	3.5558	1	329990	+		16193	17291;23088	11074	11083	18723	18723					0.03331242074330021
IFYMNNPSRV	10	Unmodified	_IFYMNNPSRV_					0	0	0		nc|ENSG00000090512|Q9UGM5-2|FETUB;ENSG00000090512|ENST00000265029|FETUB	nc|ENSG00000090512|Q9UGM5-2|FETUB	nc|ENSG00000090512|Q9UGM5-2|FETUB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.8084106445312	2	620.81079	1239.60703	0.1525	9.4673E-05	-4.0628	-0.0025222	-3.9103	-0.0024275	620.8084857499598	59.522	1.8774	60.075	59.343	61.22	0.55323					109	49	4	0	0	0	0.44803	1	6315	6315		60.118	15.096	1	3699000			16194	1647	11075	11084	18724	18724					-0.003191404800872988
IFYVSDQEEND	11	Unmodified	_IFYVSDQEEND_					0	0	0		nc|ENSG00000112769|Q16363-2|LAMA4;nc|ENSG00000112769|Q16363|LAMA4;ENSG00000112769|ENST00000230538|LAMA4	nc|ENSG00000112769|Q16363-2|LAMA4	nc|ENSG00000112769|Q16363-2|LAMA4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.8800354003906	3	453.52974	1357.56739	-0.018543	-8.4097E-06	-2.1603	-0.00097976	-2.1788	-0.00098817	453.86308651168633	21.327	0.3952	20.699	20.522	20.917	-0.62835					14	9	2	0	0	0	0.17648	1	788	788		26.75	19.35	1	39618			16195	2679	11076	11085	18725	18725					-0.09709033740455197
IFYVSDQEEND	11	Unmodified	_IFYVSDQEEND_					0	0	0		nc|ENSG00000112769|Q16363-2|LAMA4;nc|ENSG00000112769|Q16363|LAMA4;ENSG00000112769|ENST00000230538|LAMA4	nc|ENSG00000112769|Q16363-2|LAMA4	nc|ENSG00000112769|Q16363-2|LAMA4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	453.52974	1357.56739	0.012857	5.8312E-06	-3.2131	-0.0014572	-3.2003	-0.0014514	453.8623356958703	20.978	0.53363	20.518	20.366	20.9	-0.4591	-0.090133	-0.00074746	NaN	15.921	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18355			16196	2679	11076	11085							-0.09709033740455197
IGAAIVSGSH	10	Unmodified	_IGAAIVSGSH_					0	0	0			REV__ENST00000563822.1_1_16:1505719-1509320:-|nuORF	REV__ENST00000563822.1_1_16:1505719-1509320:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7919006347656	2	456.250892	910.48723	0.21443	9.7836E-05	-0.34135	-0.00015574	-0.12691	-5.7904E-05	456.25046793336634	40.143	0.71791	40.224	40.046	40.764	0.081345					30	23	2	0	0	0	0.37624	1	2513	2513		21.96	15.224	1	169890	+		16197	17400	11077	11086	18726	18726					0.02840614237675254
IGAAVRWP	8	Unmodified	_IGAAVRWP_					0	0	0			REV__ENST00000609803.2_1_12:46120637-46120871:-|nuORF	REV__ENST00000609803.2_1_12:46120637-46120871:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77789306640625	2	435.253237	868.491922	-1.1146	-0.00048511	3.2418	0.001411	2.1273	0.0009259	435.25536625296957	40.214	0.19241	40.803	40.681	40.874	0.58915					6	4	2	0	0	0	0.4196	1	3429	3429		14.664	0	1	102350	+		16198	29421	11078	11087	18727	18727					0.0524154317108696
IGAGVVNTIFT	11	Unmodified	_IGAGVVNTIFT_					0	0	0		ENSG00000059804|ENST00000075120|SLC2A3;ENST00000490763.1_1_12:8078421-8082456:-|nuORF	ENSG00000059804|ENST00000075120|SLC2A3	ENSG00000059804|ENST00000075120|SLC2A3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.3101196289062	2	546.308406	1090.60226	-1.0038	-0.00054838	0.54004	0.00029503	-0.46376	-0.00025336	546.3084335852233	66.771	0.43459	66.771	66.533	66.967	0					33	22	2	0	0	0	0.638	1	5900	5900		40.058	0.80534	1	112190			16199	1058	11079	11088	18728	18728					0.06058298648804339
IGALLRKV	8	Unmodified	_IGALLRKV_					0	0	0		nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2;ENSG00000160796|ENST00000450053|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3001708984375	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.86294	1	6990	6990		8.8223	0	1	1921500			16200	5607	11080	11089	18729	18729					0.14627262273359065
IGALRIEILNK	11	Unmodified	_IGALRIEILNK_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9327392578125	3	413.930962	1238.77106	0.23139	9.5777E-05	4.1873	0.0017332	4.4187	0.001829	413.9326448757643	44.768	3.3816	44.817	43.631	47.012	0.048996					183	86	4	0	0	0	0.76892	1	3267	3267		17.833	0.6664	1	706670			16201	1951	11081	11090	18730	18730					0.161222002823024
IGAVGPLLK	9	Unmodified	_IGAVGPLLK_					0	0	0			REV__nc|ENSG00000185513|Q9Y468-3|L3MBTL1	REV__nc|ENSG00000185513|Q9Y468-3|L3MBTL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.28662109375	2	434.286746	866.558939	-0.30416	-0.00013209	0.27728	0.00012042	-0.026885	-1.1676E-05	434.2867942921172	49.406	0.90239	49.866	49.499	50.401	0.45983					46	21	3	0	0	0	0.3636	1	4807	4807		60.294	0	1	1426500	+		16202	22770	11082	11091	18731	18731					0.12032153662187284
IGEELKQAG	9	Unmodified	_IGEELKQAG_					0	0	0		nc|ENSG829|Q9HDB9|ERVK-5_gag	nc|ENSG829|Q9HDB9|ERVK-5_gag	nc|ENSG829|Q9HDB9|ERVK-5_gag	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.2610778808594	2	472.756007	943.497461	-1.9914	-0.00094145	1.8703	0.00088421	-0.12108	-5.7242E-05	472.75680354138467	25.567	0.54731	25.567	25.286	25.834	0					40	25	2	0	0	0	0.76255	1	929	929		35.618	2.1027	1	41084			16203	15362	11083	11092	18732	18732					0.023451771722307058
IGFLNPDR	8	Unmodified	_IGFLNPDR_					0	0	0			REV__nc|ENSG00000214954|Q6ZNQ3-2|LRRC69	REV__nc|ENSG00000214954|Q6ZNQ3-2|LRRC69	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2535095214844	2	466.253434	930.492316	-1.5133	-0.00070558	2.5281	0.0011787	1.0148	0.00047317	466.2545098406443	61.17	1.13	61.17	60.102	61.232	0					111	49	3	0	0	0	0.8347	1	5316	5316		23.042	1.0826	1	374960	+		16204	23671	11084	11093	18733	18733					0.024289181002814075
IGGEHSFSLL	10	Unmodified	_IGGEHSFSLL_					0	0	0		ENST00000469230.5_1_6:26383324-26383498:+|nuORF	ENST00000469230.5_1_6:26383324-26383498:+|nuORF	ENST00000469230.5_1_6:26383324-26383498:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.28173828125	2	530.277106	1058.53966	-0.12727	-6.7486E-05	-0.52766	-0.00027981	-0.65493	-0.00034729	530.2761666144311	58.449	0.24247	58.536	58.44	58.682	0.087002					20	11	2	0	0	0	0.37624	1	4977	4977		56.721	16.148	1	51839			16205	12195	11085	11094	18734	18734					0.01273152580643
IGGEHSFSLL	10	Unmodified	_IGGEHSFSLL_					0	0	0		ENST00000469230.5_1_6:26383324-26383498:+|nuORF	ENST00000469230.5_1_6:26383324-26383498:+|nuORF	ENST00000469230.5_1_6:26383324-26383498:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	530.277106	1058.53966	-0.46923	-0.00024882	1.8159	0.00096294	1.3467	0.00071412	530.2782642725492	58.6	0.35491	58.592	58.275	58.629	-0.0074387	0.072444	0.0017309	NaN	56.721	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77742			16206	12195	11085	11094							0.01273152580643
IGGEHSFSLL	10	Unmodified	_IGGEHSFSLL_					0	0	0		ENST00000469230.5_1_6:26383324-26383498:+|nuORF	ENST00000469230.5_1_6:26383324-26383498:+|nuORF	ENST00000469230.5_1_6:26383324-26383498:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	530.277106	1058.53966	-0.51868	-0.00027504	2.9251	0.0015511	2.4065	0.0012761	530.7794643696137	57.999	0.24513	58.393	58.196	58.442	0.39407	-0.12685	0.0029072	NaN	56.721	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76858			16207	12195	11085	11094							0.01273152580643
IGGFKTRRAQ	10	Unmodified	_IGGFKTRRAQ_					0	0	0			REV__L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|77|3|sense	REV__L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|77|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3298950195312	2	567.330539	1132.64652	-1.3957	-0.00079181	0.07479	4.2431E-05	-1.3209	-0.00074938	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86589	1	9201	9201		29.15	1.2673	1	17338000	+		16208	29548	11086	11095	18735	18735					0.08550747585650242
IGGGMAFTF	9	Unmodified	_IGGGMAFTF_					0	0	0		ENSG00000102144|ENST00000373316|PGK1;ENST00000474281.1_1_X:77378368-77378476:+|nuORF;nc|ENSG00000102144|P00558-2|PGK1	ENSG00000102144|ENST00000373316|PGK1	ENSG00000102144|ENST00000373316|PGK1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2470397949219	2	450.717839	899.421125	-0.12807	-5.7724E-05	1.226	0.00055257	1.0979	0.00049484	450.7202973537519	66.799	0.79073	66.828	66.587	67.378	0.02858					45	37	2	0	0	0	0.20789	1	6379	6379		33.516	0	1	41443			16209	1992	11087	11096	18736	18736					-0.032609179287419465
IGGGRPVER	9	Unmodified	_IGGGRPVER_					0	0	0			REV__ENST00000561543.5_1_15:52970314-52971190:-|nuORF	REV__ENST00000561543.5_1_15:52970314-52971190:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.76885986328125	2	470.769783	939.525013	-0.46989	-0.00022121	-1.5944	-0.00075061	-2.0643	-0.00097182	470.768898093518	52.94	1.6168	52.866	52.471	54.088	-0.074509					101	42	3	0	0	0	0.74721	1	4435	4435		37.159	1.9584	1	1875900	+		16210	28783	11088	11097	18737	18737					0.052831252231385406
IGGGSEIIALT	11	Unmodified	_IGGGSEIIALT_					0	0	0			REV__nc|ENSG00000134982|P25054-2|APC	REV__nc|ENSG00000134982|P25054-2|APC	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3055419921875	2	515.792589	1029.57063	-0.6556	-0.00033815	-2.2716	-0.0011716	-2.9271	-0.0015098	515.7927950776249	62.465	0.44765	62.488	62.222	62.669	0.022984					30	21	2	0	0	0	0.1725	1	5447	5447		14.865	0	1	66158	+		16211	19180	11089	11098	18738	18738					0.05702305894828896
IGGHVFGL	8	Unmodified	_IGGHVFGL_					0	0	0			REV__nc|ENSG00000260811|A6NMZ5|OR4C45	REV__nc|ENSG00000260811|A6NMZ5|OR4C45	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.2281799316406	2	400.226688	798.438824	1.9396	0.0007763	0.82933	0.00033192	2.769	0.0011082	400.22746720749507	55.46	1.1518	55.491	54.998	56.15	0.030838					66	28	3	0	0	0	0.84567	3	4974	4974;4986;5016		33.493	8.989	1	652610	+		16212	30251	11090	11099	18739;18740;18741	18739					0.0315416538842328
IGGILTPLV	9	Unmodified	_IGGILTPLV_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7882385253906	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.7932	1	3207	3207		18.324	4.5491	1	403970			16213	6807	11091	11100	18742	18742					0.11308733942314575
IGGIVNTLIH	10	Unmodified	_IGGIVNTLIH_					0	0	0		ENSG00000174957|ENST00000312298|OR5J2	ENSG00000174957|ENST00000312298|OR5J2	ENSG00000174957|ENST00000312298|OR5J2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8104248046875	2	518.811116	1035.60768	1.249	0.000648	-2.9044	-0.0015068	-1.6554	-0.00085883	518.8096033734023	97.807	0.8631	98.198	97.641	98.504	0.39065					64	20	5	0	0	0	0.51302	1	11815	11815		54.776	0.01164	1	3689300			16214	6979	11092	11101	18743	18743					0.09130022231283874
IGGIVNTLIH	10	Unmodified	_IGGIVNTLIH_					0	0	0		ENSG00000174957|ENST00000312298|OR5J2	ENSG00000174957|ENST00000312298|OR5J2	ENSG00000174957|ENST00000312298|OR5J2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.810302734375	2	518.811116	1035.60768	1.4869	0.00077141	-3.1709	-0.0016451	-1.684	-0.00087369	518.8094559796755	98.41	1.4425	98.787	98.408	99.851	0.37679					96	35	4	0	0	0	0.6116	1	11924	11924		49.442	1.7842	1	12414000			16215	6979	11092	11101	18744	18744					0.09130022231283874
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	2	434.778754	867.542954	0.048931	2.1274E-05	3.263	0.0014187	3.312	0.00144	434.780055906595	38.381	1.4097	38.353	37.994	39.403	-0.027843					122	32	4	0	0	0	0.5393	1	2629	2629		50.025	9.4519	1	2404700	+		16216	17093	11093	11102	18745	18745					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77960205078125	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.67235	1	3738	3738		42.474	7.2737	1	2017500	+		16217	17093	11093	11102	18746	18746					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801513671875	2	434.778754	867.542954	-0.72462	-0.00031505	3.8898	0.0016912	3.1652	0.0013761	434.78037611122505	35.149	1.2526	35.093	34.81	36.063	-0.056381					100	28	4	0	0	0	0.69914	1	2252	2252		40.573	3.4135	1	2671400	+		16218	17093	11093	11102	18747	18747					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801818847656	2	434.778754	867.542954	-0.14051	-6.1091E-05	3.4383	0.0014949	3.2978	0.0014338	434.7801225093181	38.257	1.3722	38.268	37.812	39.184	0.011173					116	31	4	0	0	0	0.69914	1	2591	2591		40.573	7.057	1	2138600	+		16219	17093	11093	11102	18748	18748					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7800598144531	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.67235	1	1787	1787		42.474	7.2737	1	2251100	+		16220	17093	11093	11102	18749	18749					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.17139	7.4517E-05	3.201	0.0013917	3.3724	0.0014663	434.7800235008866	37.854	1.477	37.948	37.639	39.116	0.094318					162	48	4	0	0	0	0.76996	1	2229	2229		33.516	1.5607	1	2203700	+		16221	17093	11093	11102	18750	18750					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7796325683594	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.7932	1	2873	2873		19.36	3.7238	1	2537300	+		16222	17093	11093	11102	18751	18751					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799377441406	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.67235	1	3418	3418		42.474	7.2737	1	2750200	+		16223	17093	11093	11102	18752	18752					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7802429199219	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.76996	1	1818	1818		33.516	3.0119	1	2158200	+		16224	17093	11093	11102	18753	18753					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7803039550781	2	434.778754	867.542954	-0.10818	-4.7034E-05	3.1846	0.0013846	3.0765	0.0013376	434.7800213108271	39.594	1.7303	39.546	38.941	40.672	-0.04789					162	53	5	0	0	0	0.76402	1	2431	2431		35.201	1.6851	1	5065300	+		16225	17093	11093	11102	18754	18754					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799377441406	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.67235	2	3412	3412;3424		42.474	7.2737	1	2833200	+		16226	17093	11093	11102	18755;18756	18755					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801513671875	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.76996	2	2503	2455;2503		33.516	3.7478	1	8013100	+		16227	17093	11093	11102	18757;18758	18758					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.78021240234375	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.76996	1	3374	3374		33.516	3.674	1	17256000	+		16228	17093	11093	11102	18759	18759					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7787170410156	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.76996	1	3663	3663		33.516	0	1	6567600	+		16229	17093	11093	11102	18760	18760					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77972412109375	2	434.778754	867.542954	-0.7455	-0.00032413	3.1434	0.0013667	2.3979	0.0010426	434.7799642778913	44.364	1.5041	44.814	44.322	45.826	0.45025					111	36	4	0	0	0	0.67235	3	4070	4070;4082;4121		42.474	7.2737	1	4473900	+		16230	17093	11093	11102	18761;18762;18763	18761					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7803039550781	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.76996	1	2497	2497		33.516	1.5607	1	7451800	+		16231	17093	11093	11102	18764	18764					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7787780761719	2	434.778754	867.542954	-0.91901	-0.00039957	3.2028	0.0013925	2.2837	0.00099292	434.7800246732522	44.2	1.4198	45.044	44.534	45.954	0.84437					118	34	4	0	0	0	0.49378	3	4058	4058;4070;4084		52.299	9.8247	1	4932000	+		16232	17093	11093	11102	18765;18766;18767	18765					0.10388447425282266
IGGLILVPS	9	Unmodified	_IGGLILVPS_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.8082	-0.00078616	4.5518	0.001979	2.7436	0.0011929	434.7805866671715	45.418	2.1181	45.418	43.981	46.099	0	0.3293	0.0012672	NaN	52.299	150	51	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1178600	+		16233	17093	11093	11102							0.10388447425282266
IGGPAQSGSY	10	Unmodified	_IGGPAQSGSY_					0	0	0			REV__ENSG00000111249|ENST00000261726|CUX2	REV__ENSG00000111249|ENST00000261726|CUX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7233581542969	2	468.724707	935.43486	-1.2296	-0.00057635	-1.9244	-0.000902	-3.154	-0.0014784	468.7238369987016	86.792	1.5636	87.247	86.655	88.219	0.4543					99	37	4	0	0	0	0.86348	1	10291	10291		31.53	1.2121	1	4103600	+		16234	17854	11094	11103	18768	18768					-0.03543968895939997
IGGPAQSGSY	10	Unmodified	_IGGPAQSGSY_					0	0	0			REV__ENSG00000111249|ENST00000261726|CUX2	REV__ENSG00000111249|ENST00000261726|CUX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7250671386719	2	468.724707	935.43486	-0.39652	-0.00018586	-2.0289	-0.000951	-2.4254	-0.0011369	468.7236452143359	94.367	1.0112	94.803	94.514	95.525	0.43539					45	25	2	0	0	0	0.80179	1	11293	11293		39.253	5.0803	1	892940	+		16235	17854	11094	11103	18769	18769					-0.03543968895939997
IGGPGPGRF	9	Unmodified	_IGGPGPGRF_					0	0	0			REV__ENSG00000116254|ENST00000262450|CHD5	REV__ENSG00000116254|ENST00000262450|CHD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.2359313964844	2	429.235045	856.455536	-1.7002	-0.00072977	3.2929	0.0014134	1.5927	0.00068365	429.23632496484737	63.188	2.3667	63.302	62.678	65.045	0.11389					282	104	4	0	0	0	0.77546	1	5504	5504		31.955	4.0726	1	6358600	+		16236	18193	11095	11104	18770	18770					0.02156666274379404
IGGVIGCLRVF	11	Unmodified	_IGGVIGCLRVF_					0	0	0			REV__ENSG00000087502|ENST00000360150|ERGIC2	REV__ENSG00000087502|ENST00000360150|ERGIC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3301391601562	2	567.328619	1132.64269	0.77491	0.00043963	1.7436	0.00098922	2.5185	0.0014288	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.68378	1	8924	8924		34.173	6.0911	1	6344600	+		16237	16936	11096	11105	18771	18771					0.08166941767581193
IGGVIGCLRVF	11	Unmodified	_IGGVIGCLRVF_					0	0	0			REV__ENSG00000087502|ENST00000360150|ERGIC2	REV__ENSG00000087502|ENST00000360150|ERGIC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3306274414062	2	567.328619	1132.64269	-1.3957	-0.00079181	3.4589	0.0019623	2.0632	0.0011705	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.60283	1	9537	9537		44.117	4.864	1	17338000	+		16238	16936	11096	11105	18772	18772					0.08166941767581193
IGGVLAGVLI	10	Unmodified	_IGGVLAGVLI_					0	0	0			REV__ENSG00000180251|ENST00000295269|SLC9A4	REV__ENSG00000180251|ENST00000295269|SLC9A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3013610839844	2	456.299853	910.585153	-0.75416	-0.00034412	3.5877	0.0016371	2.8336	0.001293	456.3012900851617	35.065	1.7041	35.071	34.727	36.431	0.0063934					112	39	4	0	0	0	0.85976	1	2251	2251		35.201	3.2459	1	634200	+		16239	22383	11097	11106	18773	18773					0.1262842283365444
IGGVLLKI	8	Unmodified	_IGGVLLKI_					0	0	0		ENSG00000149781|ENST00000345728|FERMT3;nc|ENSG00000149781|Q86UX7|FERMT3	ENSG00000149781|ENST00000345728|FERMT3	ENSG00000149781|ENST00000345728|FERMT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7850341796875	2	406.783839	811.553125	1.6031	0.00065213	2.1137	0.0008598	3.7168	0.0015119	406.78457300863613	33.544	1.5003	33.714	33.314	34.814	0.16971					120	35	4	0	0	0	0.80706	1	2391	2391		19.36	0	1	8051400			16240	5049	11098	11107	18774	18774					0.13981055150509292
IGGVLLLK	8	Unmodified	_IGGVLLLK_					0	0	0			REV__ENSG00000168806|ENST00000305641|LCMT2	REV__ENSG00000168806|ENST00000305641|LCMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78509521484375	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.80963	1	1224	1224		15.636	0	1	1286900	+		16241	21520	11099	11108	18775	18775					0.1398105515052066
IGGVPGMEAH	10	Unmodified	_IGGVPGMEAH_					0	0	0		nc|ENSG00000257365|P49356-2|FNTB;ENSG00000257365|ENST00000246166|FNTB	nc|ENSG00000257365|P49356-2|FNTB	nc|ENSG00000257365|P49356-2|FNTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.2361755371094	2	484.236927	966.459301	0.64492	0.00031229	-2.4812	-0.0012015	-1.8363	-0.00088918	484.2357261388031	84.984	0.56373	85.133	84.777	85.34	0.14857					41	12	4	0	0	0	0.50394	1	8289	8289		55.504	0	1	1640500			16242	8906	11100	11109	18776	18776					-0.025270320140862168
IGGWGRTQ	8	Unmodified	_IGGWGRTQ_					0	0	0			REV__ENSG00000105929|ENST00000310018|ATP6V0A4	REV__ENSG00000105929|ENST00000310018|ATP6V0A4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2645568847656	2	437.730126	873.4457	-0.36958	-0.00016178	3.3494	0.0014661	2.9798	0.0013043	437.7310924550666	23.663	0.21654	23.61	23.457	23.674	-0.052114					7	5	2	0	0	0	0.4196	1	855	855		4.3163	0	1	9433.1	+		16243	17582	11101	11110	18777	18777					0.003914782690003449
IGHKRGVK	8	Unmodified	_IGHKRGVK_					0	0	0			REV__nc|ENSG00000127922|Q6ZVN7|SEM1	REV__nc|ENSG00000127922|Q6ZVN7|SEM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.7737121582031	2	447.785236	893.555919	0.23381	0.00010469	3.7136	0.0016629	3.9474	0.0017676	447.7867505129625	41.282	2.7563	41.251	40.339	43.096	-0.030987					163	72	3	0	0	0	0.4196	1	3034	3034		12.959	0	1	930310	+		16244	29830	11102	11111	18778	18778					0.10488323328036131
IGIFLKQFKKS	11	Unmodified	_IGIFLKQFKKS_					0	0	0		ENSG00000137460|ENST00000511601|FHDC1	ENSG00000137460|ENST00000511601|FHDC1	ENSG00000137460|ENST00000511601|FHDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2738952636719	3	436.939458	1307.79654	1.2427	0.00054299	-0.72106	-0.00031506	0.52165	0.00022793	436.9390015295864	46.658	1.2437	46.654	46.284	47.528	-0.0041618					96	31	4	0	0	0	0.71207	1	3785	3785		29.551	8.7136	1	651950			16245	4200	11103	11112	18779	18779					0.1549567480474252
IGIFLKQFKKS	11	Unmodified	_IGIFLKQFKKS_					0	0	0		ENSG00000137460|ENST00000511601|FHDC1	ENSG00000137460|ENST00000511601|FHDC1	ENSG00000137460|ENST00000511601|FHDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2740173339844	3	436.939458	1307.79654	-0.34593	-0.00015115	1.0516	0.0004595	0.7057	0.00030835	436.9397797202756	46.5	1.3452	46.421	46.006	47.352	-0.079006					113	38	4	0	0	0	0.76579	1	3451	3451		18.531	0.69791	1	942420			16246	4200	11103	11112	18780	18780					0.1549567480474252
IGIFLKQFKKS	11	Unmodified	_IGIFLKQFKKS_					0	0	0		ENSG00000137460|ENST00000511601|FHDC1	ENSG00000137460|ENST00000511601|FHDC1	ENSG00000137460|ENST00000511601|FHDC1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	436.939458	1307.79654	0.087811	3.8368E-05	0.4533	0.00019806	0.54111	0.00023643	436.93951486031364	46.748	1.4073	46.734	46.189	47.597	-0.013821	0.19593	-0.00088208	NaN	29.551	110	37	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	618900			16247	4200	11103	11112							0.1549567480474252
IGIFLKQFKKS	11	Unmodified	_IGIFLKQFKKS_					0	0	0		ENSG00000137460|ENST00000511601|FHDC1	ENSG00000137460|ENST00000511601|FHDC1	ENSG00000137460|ENST00000511601|FHDC1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	436.939458	1307.79654	-1.5892	-0.00069437	2.2779	0.00099529	0.68869	0.00030092	436.9403019819708	46.415	1.4859	46.431	45.966	47.452	0.015511	-0.10734	0.0015096	NaN	29.551	115	41	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	814020			16248	4200	11103	11112							0.1549567480474252
IGIFLKQFKKS	11	Unmodified	_IGIFLKQFKKS_					0	0	0		ENSG00000137460|ENST00000511601|FHDC1	ENSG00000137460|ENST00000511601|FHDC1	ENSG00000137460|ENST00000511601|FHDC1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	436.939458	1307.79654	-0.34616	-0.00015125	1.2568	0.00054916	0.91067	0.00039791	437.2744058398717	45.514	0.67482	46.41	46.169	46.843	0.89542	-0.12855	0.00017122	NaN	29.551	19	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	275350			16249	4200	11103	11112							0.1549567480474252
IGIIPPVKKR	10	Unmodified	_IGIIPPVKKR_					0	0	0			REV__nc|ENSG00000078124|Q9NUN7-2|ACER3	REV__nc|ENSG00000078124|Q9NUN7-2|ACER3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402099609375	2	560.881876	1119.7492	-1.4168	-0.00079467	-0.4293	-0.00024078	-1.8461	-0.0010355	560.8816806934542	102.13	0.15555	102.27	102.14	102.3	0.13569					5	3	2	0	0	0	0.37624	1	10675	10675		17.365	9.6747	1	175970	+		16250	16760	11104	11113	18781	18781					0.19411440324415707
IGILLTVTHGI	11	Unmodified	_IGILLTVTHGI_					0	0	0			REV__nc|ENSG00000174792|Q17RF5-2|ODAPH	REV__nc|ENSG00000174792|Q17RF5-2|ODAPH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.853759765625	2	568.855524	1135.69649	-1.3907	-0.00079112	-2.9165	-0.001659	-4.3072	-0.0024502	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.68378	1	10642	10642		34.173	5.023	1	72465000	+		16251	30042	11105	11114	18782	18782					0.1340743747093711
IGIPASKII	9	Unmodified	_IGIPASKII_					0	0	0		ENST00000478204.5_1_1:33549518-33558906:+|nuORF;nc|ENSG00000142920|Q96A70-3|AZIN2;nc|ENSG00000142920|Q96A70-4|AZIN2;ENST00000484656.5_1_1:33549518-33583718:+|nuORF;ENST00000471119.5_1_1:33546965-33585780:+|nuORF;ENSG00000142920|ENST00000294517|AZIN2;ENST00000481886.5_1_1:33546965-33585780:+|nuORF;nc|ENSG00000142920|Q96A70-2|AZIN2	ENST00000478204.5_1_1:33549518-33558906:+|nuORF	ENST00000478204.5_1_1:33549518-33558906:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3011779785156	2	456.299853	910.585153	-0.11111	-5.0701E-05	2.9884	0.0013636	2.8773	0.0013129	456.3010566410468	35.268	1.48	35.256	34.768	36.248	-0.012203					106	34	4	0	0	0	0.74721	1	2175	2175		37.159	1.9584	1	794600			16252	4589	11106	11115	18783	18783					0.1262842283365444
IGIPKEYL	8	Unmodified	_IGIPKEYL_					0	0	0		ENSG00000130348|ENST00000369046|QRSL1	ENSG00000130348|ENST00000369046|QRSL1	ENSG00000130348|ENST00000369046|QRSL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2331848144531	2	466.776211	931.537869	0.10759	5.022E-05	2.6689	0.0012458	2.7765	0.001296	466.7754170010401	66.734	0.10998	67.119	67.051	67.161	0.38515					4	2	2	0	0	0	0.4196	1	7289	7289		44.531	11.015	1	69823			16253	3639	11107	11116	18784	18784					0.06936143562666075
IGIPVIKE	8	Unmodified	_IGIPVIKE_					0	0	0		nc|ENSG00000164169|Q6P2P2-2|PRMT9;ENSG00000164169|ENST00000322396|PRMT9	nc|ENSG00000164169|Q6P2P2-2|PRMT9	nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77923583984375	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.87064	1	1869	1869		29.15	0	1	2251100			16254	5932	11108	11117	18785	18785					0.10388447425293634
IGIQQRRAA	9	Unmodified	_IGIQQRRAA_					0	0	0		ENST00000430014.1_1:144520944-144521145:-|nuORF;ENST00000513414.1_1_5:49962602-49962845:+|nuORF;ENST00000510040.1_1_5:49962653-49963972:+|nuORF	ENST00000430014.1_1:144520944-144521145:-|nuORF	ENST00000430014.1_1:144520944-144521145:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7998046875	2	506.804157	1011.59376	-1.4266	-0.00072302	-3.9261	-0.0019897	-5.3527	-0.0027128	506.8022071365967	51.979	1.1494	51.979	51.46	52.609	0					48	30	2	0	0	0	0.69914	1	4220	4220		40.573	7.057	1	87647			16255	11622	11109	11118	18786	18786					0.0884278952285058
IGITLSNAIVN	11	Unmodified	_IGITLSNAIVN_					0	0	0		ENSG00000162669|ENST00000370425|HFM1;nc|ENSG00000162669|A2PYH4-2|HFM1;ENST00000462405.5_1_1:91728075-91813019:-|nuORF	ENSG00000162669|ENST00000370425|HFM1	ENSG00000162669|ENST00000370425|HFM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.8307495117188	2	557.826963	1113.63937	3.0808	0.0017186	3.9281	0.0021912	7.0089	0.0039098	557.8291525228157	101	1.6416	100.95	100.53	102.17	-0.052116					75	38	3	0	0	0	0.74763	1	10963	10963		22.58	0.61977	1	714690			16256	5715	11110	11119	18787	18787					0.08709970194558991
IGIVVFVAG	9	Unmodified	_IGIVVFVAG_					0	0	0		ENSG00000083857|ENST00000441802|FAT1;ENST00000500085.2_1_4:187509748-187518366:-|nuORF	ENSG00000083857|ENST00000441802|FAT1	ENSG00000083857|ENST00000441802|FAT1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26788330078125	2	437.773471	873.53239	-0.04977	-2.1788E-05	3.7386	0.0016367	3.6888	0.0016149	437.7747106755147	50.712	0.33474	50.71	50.566	50.901	-0.0020447					18	13	2	0	0	0	0.20789	1	4299	4299		39.021	3.8208	1	119130			16257	1509	11111	11120	18788	18788					0.0905646477085611
IGKLKAKII	9	Unmodified	_IGKLKAKII_					0	0	0		ENST00000551270.1_1_12:104283206-104309165:-|nuORF;nc|ENSG00000214198|Q6P2S7-2|TTC41P;nc|ENSG00000214198|Q6P2S7|TTC41P	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.3536071777344	2	492.35242	982.690287	-0.12121	-5.9679E-05	2.2674	0.0011163	2.1461	0.0010567	492.3533697928512	65.439	0.64641	65.992	65.735	66.381	0.5526					37	18	3	0	0	0	0.7932	1	7138	7138		25.45	12.491	1	710090			16258	13669	11112	11121	18789	18789					0.19824964030078718
IGKPVLGIC	9	Unmodified	_IGKPVLGIC_					0	0	0		ENSG00000163655|ENST00000496455|GMPS	ENSG00000163655|ENST00000496455|GMPS	ENSG00000163655|ENST00000496455|GMPS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2751770019531	2	450.272781	898.531009	0.39485	0.00017779	4.0463	0.0018219	4.4411	0.0019997	450.2744735019799	95.043	2.3163	95.463	94.66	96.976	0.41964					118	56	3	0	0	0	0.20789	1	11337	11337		23.042	11.531	1	539740			16259	5848	11113	11122	18790	18790					0.07768507410435177
IGKPVLGIC	9	Unmodified	_IGKPVLGIC_					0	0	0		ENSG00000163655|ENST00000496455|GMPS	ENSG00000163655|ENST00000496455|GMPS	ENSG00000163655|ENST00000496455|GMPS	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	450.272781	898.531009	0.59933	0.00026986	3.7256	0.0016775	4.325	0.0019474	450.27436837530115	94.843	2.3684	95.275	94.461	96.829	0.4324	-0.047598	-0.00083867	NaN	23.042	122	58	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	522010			16260	5848	11113	11122							0.07768507410435177
IGKYRIKL	8	Unmodified	_IGKYRIKL_					0	0	0		ENST00000553883.1_1_14:94401004-94406176:-|nuORF;nc|ENSG00000100628|Q96Q27-1|ASB2;ENSG00000100628|ENST00000555019|ASB2	ENST00000553883.1_1_14:94401004-94406176:-|nuORF	ENST00000553883.1_1_14:94401004-94406176:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.9802551269531	2	495.826569	989.638586	-0.7066	-0.00035035	3.0964	0.0015353	2.3898	0.0011849	495.8301300394514	18.204	0.14565	18.248	18.203	18.348	0.044048					9	7	2	0	0	0	0.4196	1	301	301		26.796	0	1	65391			16261	13709	11114	11123	18791	18791					0.14335220336170096
IGLFPKDVTH	10	Unmodified	_IGLFPKDVTH_					0	0	0		nc|ENSG00000021461|Q9HB55-6|CYP3A43;nc|ENSG00000021461|Q9HB55-3|CYP3A43;ENSG00000021461|ENST00000354829|CYP3A43;nc|ENSG00000021461|Q9HB55-2|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.3162841796875	2	563.816399	1125.61824	-0.25081	-0.00014141	2.7419	0.0015459	2.491	0.0014045	563.8170061947588	55.275	1.2619	55.238	54.668	55.929	-0.036827					46	40	2	0	0	0	0.86272	1	4679	4679		24.519	0.99649	1	166930			16262	14741	11115	11124	18792	18792					0.060460048857066795
IGLISPGVL	9	Unmodified	_IGLISPGVL_					0	0	0			REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7793273925781	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.69914	1	3519	3519		40.573	0	1	2750200	+		16263	28635	11116	11125	18793	18793					0.10388447425293634
IGLISPGVL	9	Unmodified	_IGLISPGVL_					0	0	0			REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7802734375	2	434.778754	867.542954	0.12026	5.2288E-05	3.2796	0.0014259	3.3998	0.0014782	434.78004408406343	33.259	0.88562	33.227	32.891	33.776	-0.032677					85	40	3	0	0	0	0.7932	1	1583	1583		26.796	1.3459	1	316820	+		16264	28635	11116	11125	18794	18794					0.10388447425293634
IGLISPGVL	9	Unmodified	_IGLISPGVL_					0	0	0			REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7798156738281	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.7932	1	2178	2178		25.45	2.4077	1	4750000	+		16265	28635	11116	11125	18795	18795					0.10388447425293634
IGLISPGVL	9	Unmodified	_IGLISPGVL_					0	0	0			REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7793273925781	2	434.778754	867.542954	-0.61408	-0.00026699	3.3286	0.0014472	2.7146	0.0011802	434.78015323105376	52.924	3.3917	52.849	52.471	55.862	-0.074512					147	100	2	0	0	0	0.7932	1	4464	4464		19.36	0	1	526750	+		16266	28635	11116	11125	18796	18796					0.10388447425293634
IGLISPGVL	9	Unmodified	_IGLISPGVL_					0	0	0			REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7802429199219	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.69914	1	2491	2491		40.573	0	1	8013100	+		16267	28635	11116	11125	18797	18797					0.10388447425293634
IGLLFNILE	9	Unmodified	_IGLLFNILE_					0	0	0			REV__nc|ENSG00000087269|P78316-2|NOP14	REV__nc|ENSG00000087269|P78316-2|NOP14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3140869140625	2	516.310418	1030.60628	3.1012	0.0016012	3.8274	0.0019761	6.9286	0.0035773	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.7932	1	13038	13038		19.997	0.6368	1	1162600	+		16268	16930	11117	11126	18798	18798					0.09220388142512093
IGLLLEDPL	9	Unmodified	_IGLLLEDPL_					0	0	0			REV__nc|ENSG00000145604|Q13309-2|SKP2	REV__nc|ENSG00000145604|Q13309-2|SKP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956848144531	2	491.794601	981.574648	-0.71044	-0.00034939	3.0101	0.0014803	2.2996	0.001131	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.7932	1	3951	3951		24.203	1.1603	1	571510	+		16269	29912	11118	11127	18799	18799					0.08312395388554705
IGLLLEDPL	9	Unmodified	_IGLLLEDPL_					0	0	0			REV__nc|ENSG00000145604|Q13309-2|SKP2	REV__nc|ENSG00000145604|Q13309-2|SKP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958984375	2	491.794601	981.574648	-0.70573	-0.00034708	2.912	0.0014321	2.2063	0.001085	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.72402	1	4279	4279		38.806	1.647	1	772710	+		16270	29912	11118	11127	18800	18800					0.08312395388554705
IGLLSPGIL	9	Unmodified	_IGLLSPGIL_					0	0	0		ENST00000568920.1_1_16:57246991-57250108:+|nuORF;ENST00000562768.5_1_16:57241991-57250827:+|nuORF;ENSG00000159579|ENST00000394420|RSPRY1	ENST00000568920.1_1_16:57246991-57250108:+|nuORF	ENST00000568920.1_1_16:57246991-57250108:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7879943847656	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	2	2458	2458;2567		25.45	3.6603	1	11532000			16271	5535	11119	11128	18801;18802	18801					0.11308733942325944
IGLLSPGIL	9	Unmodified	_IGLLSPGIL_					0	0	0		ENST00000568920.1_1_16:57246991-57250108:+|nuORF;ENST00000562768.5_1_16:57241991-57250827:+|nuORF;ENSG00000159579|ENST00000394420|RSPRY1	ENST00000568920.1_1_16:57246991-57250108:+|nuORF	ENST00000568920.1_1_16:57246991-57250108:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7885437011719	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.76402	1	2668	2668		35.201	4.6971	1	10215000			16272	5535	11119	11128	18803	18803					0.11308733942325944
IGLLTPSVL	9	Unmodified	_IGLLTPSVL_					0	0	0			REV__nc|ENSG00000103222|P33527-8|ABCC1	REV__nc|ENSG00000103222|P33527-8|ABCC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7874755859375	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.77546	1	3067	3067		31.955	0	1	652510	+		16273	17396	11120	11129	18804	18804					0.10984716596760791
IGLLTPSVL	9	Unmodified	_IGLLTPSVL_					0	0	0			REV__nc|ENSG00000103222|P33527-8|ABCC1	REV__nc|ENSG00000103222|P33527-8|ABCC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79168701171875	2	456.791861	911.569169	-1.2485	-0.0005703	3.083	0.0014083	1.8345	0.000838	456.7931433333729	40.143	1.4449	40.149	39.563	41.008	0.0065041					84	46	2	0	0	0	0.77546	1	2634	2634		31.955	1.4512	1	1011500	+		16274	17396	11120	11129	18805	18805					0.10984716596760791
IGLLVQVLG	9	Unmodified	_IGLLVQVLG_					0	0	0			REV__ENST00000481822.1_1_1:155223346-155224854:-|nuORF	REV__ENST00000481822.1_1_1:155223346-155224854:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30126953125	2	456.299853	910.585153	0.12298	5.6116E-05	2.7993	0.0012773	2.9223	0.0013334	456.30098509136985	34.994	1.698	34.939	34.615	36.313	-0.055149					136	59	3	0	0	0	0.76996	1	1849	1849		33.516	5.2613	1	657240	+		16275	20738	11121	11130	18806	18806					0.1262842283366581
IGLLVSEVFV	10	Unmodified	_IGLLVSEVFV_					0	0	0			REV__ENSG00000105520|ENST00000688289|PLPPR2	REV__ENSG00000105520|ENST00000688289|PLPPR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3270263671875	2	538.323525	1074.6325	3.4335	0.0018483	2.8142	0.001515	6.2477	0.0033633	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.84112	1	11206	11206		37.159	6.6555	1	75550000	+		16276	17547	11122	11131	18807	18807					0.09816657313990618
IGLNSEPQ	8	Unmodified	_IGLNSEPQ_					0	0	0			REV__ENSG00000138379|ENST00000260950|MSTN	REV__ENSG00000138379|ENST00000260950|MSTN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.2354431152344	2	429.2218	856.429047	0.92511	0.00039708	-3.2363	-0.0013891	-2.3112	-0.00099202	429.21964470810707	63.215	0.15224	63.243	63.116	63.268	0.028133					11	7	3	0	0	0	0.4196	1	5906	5906		29.15	0	1	46942	+		16277	19466	11123	11132	18808	18808					-0.004910674076086252
IGLPAQTADP	10	Unmodified	_IGLPAQTADP_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7639465332031	2	491.763832	981.513111	-0.79496	-0.00039093	0.20911	0.00010283	-0.58585	-0.0002881	491.7638392443188	49.097	1.1695	49.557	48.985	50.155	0.45983					77	28	5	0	0	0	0.37206	1	4763	4763		66.429	14.13	1	5885400			16278	5333	11124	11133	18809	18809					0.021614636892763883
IGLPLSLILI	10	Unmodified	_IGLPLSLILI_					0	0	0		ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3611450195312	2	526.359911	1050.70527	0.086645	4.5607E-05	2.1771	0.0011459	2.2637	0.0011915	526.3609236587663	33.368	2.0596	33.371	32.762	34.822	0.0030785					171	48	5	0	0	0	0.91289	1	2087	2087		7.1934	0	1	3096800			16279	9377	11125	11134	18810	18810					0.18194411107424457
IGLPLSLILI	10	Unmodified	_IGLPLSLILI_					0	0	0		ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.35986328125	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.88541	1	2518	2518		11.511	0	1	781950			16280	9377	11125	11134	18811	18811					0.18194411107424457
IGLPLSLILI	10	Unmodified	_IGLPLSLILI_					0	0	0		ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3609619140625	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.8488	1	2062	2062		17.365	0	1	5020100			16281	9377	11125	11134	18812	18812					0.18194411107424457
IGLPLSLILI	10	Unmodified	_IGLPLSLILI_					0	0	0		ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3609619140625	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.8488	1	2533	2533		17.365	0	1	2706400			16282	9377	11125	11134	18813	18813					0.18194411107424457
IGLPLSLILI	10	Unmodified	_IGLPLSLILI_					0	0	0		ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.361083984375	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.8488	1	1805	1805		17.365	0	1	1497200			16283	9377	11125	11134	18814	18814					0.18194411107424457
IGLPLSLILI	10	Unmodified	_IGLPLSLILI_					0	0	0		ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	ENST00000259030.2_1_3:187089157-187089205:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.36083984375	2	526.359911	1050.70527	-0.2233	-0.00011753	2.7139	0.0014285	2.4906	0.0013109	526.3612023516472	37.188	2.125	37.212	36.022	38.147	0.023624					163	60	4	0	0	0	0.86452	1	2131	2131		30.504	1.3541	1	1504200			16284	9377	11125	11134	18815	18815					0.18194411107424457
IGLQAKRTKKP	11	Unmodified	_IGLQAKRTKKP_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.93267822265625	3	413.934706	1238.78229	-1.1382	-0.00047114	-3.9325	-0.0016278	-5.0707	-0.002099	413.9330056480743	43.336	2.2043	43.3	41.98	44.184	-0.03582					131	52	3	0	0	0	0.74405	1	3382	3382		23.378	5.5448	1	471060			16285	2924	11126	11135	18816	18816					0.1724502237645993
IGLQPLAL	8	Unmodified	_IGLQPLAL_					0	0	0			REV__ENST00000409185.5_1_2:131806798-131807053:-|nuORF	REV__ENST00000409185.5_1_2:131806798-131807053:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.76739501953125	2	412.765646	823.516739	-0.024773	-1.0226E-05	2.7576	0.0011383	2.7329	0.001128	412.7671753724154	37.892	4.8812	37.868	35.596	40.477	-0.023979					267	113	4	0	0	0	0.87276	1	2476	2476		29.842	1.5873	1	1546000	+		16286	26338	11127	11136	18817	18817					0.09792178253792372
IGLQQHLA	8	Unmodified	_IGLQQHLA_					0	0	0		ENST00000592094.1_1_17:41454936-41458731:-|nuORF;ENST00000341011.11_1_17:41448764-41458699:-|nuORF;ENST00000592135.5_1_17:41454936-41458699:-|nuORF	ENST00000592094.1_1_17:41454936-41458731:-|nuORF	ENST00000592094.1_1_17:41454936-41458731:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2552185058594	2	440.255977	878.497401	-0.8618	-0.00037941	-0.60853	-0.00026791	-1.4703	-0.00064732	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.86288	1	6809	6809		26.796	2.2921	1	1365500			16287	10238	11128	11137	18818	18818					0.05329221962892916
IGLRLVLGYIL	11	Unmodified	_IGLRLVLGYIL_					0	0	0		nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2;ENSG00000160796|ENST00000450053|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.4038696289062	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.633	1	23.686	23.186	24.186	0.05291								0	0	0	0.56276	1	763	763		19.997	3.2794	1				16288	5607	11129	11138	18819	18819					0.1854857629309663
IGLRNLVMP	9	Unmodified	_IGLRNLVMP_					0	0	0		nc|ENSG00000156113|Q12791-3|KCNMA1;nc|ENSG00000156113|Q12791-5|KCNMA1;nc|ENSG00000156113|Q12791-4|KCNMA1;nc|ENSG00000156113|Q12791-2|KCNMA1;ENSG00000156113|ENST00000286628|KCNMA1;nc|ENSG00000156113|Q12791-7|KCNMA1	nc|ENSG00000156113|Q12791-3|KCNMA1	nc|ENSG00000156113|Q12791-3|KCNMA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8009033203125	2	506.802237	1011.58992	-0.048814	-2.4739E-05	-2.3669	-0.0011995	-2.4157	-0.0012243	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.77546	1	3263	3263		31.955	5.1588	1	475290			16289	15010	11130	11139	18820	18820					0.08458983704770162
IGLSKPPL	8	Unmodified	_IGLSKPPL_					0	0	0			REV__ENSG00000114541|ENST00000398540|FRMD4B	REV__ENSG00000114541|ENST00000398540|FRMD4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2670593261719	2	412.765646	823.516739	0.8823	0.00036418	0.81659	0.00033706	1.6989	0.00070124	412.7668384055558	39.31	1.1423	39.322	38.717	39.86	0.011173					50	26	3	0	0	0	0.89962	1	2779	2779		38.806	0	1	209500	+		16290	18053	11131	11140	18821	18821					0.09792178253815109
IGLSQYSQAF	10	Unmodified	_IGLSQYSQAF_					0	0	0		ENSG00000189337|ENST00000376030|KAZN	ENSG00000189337|ENST00000376030|KAZN	ENSG00000189337|ENST00000376030|KAZN	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	557.276611328125	2	557.282389	1112.55022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.419	1	69.485	68.985	69.985	0.065506								0	0	0	0.45132	1	6261	6261		56.721	9.0637	1				16291	8004	11132	11141	18822	18822					-0.001548647649542545
IGLTAHYPL	9	Unmodified	_IGLTAHYPL_					0	0	0			REV__ENSG00000182156|ENST00000328313|ENPP7	REV__ENSG00000182156|ENST00000328313|ENPP7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7956237792969	2	492.779285	983.544017	-1.05	-0.0005174	0.39507	0.00019468	-0.65489	-0.00032272	492.77938091342696	45.028	0.61366	45.491	45.185	45.799	0.46313					25	14	2	0	0	0	0.20789	1	4141	4141		18.324	0	1	468270	+		16292	22503	11133	11142	18823	18823					0.051586617941893564
IGLTNLQPK	9	Unmodified	_IGLTNLQPK_					0	0	0			REV__ENSG00000113300|ENST00000261951|CNOT6	REV__ENSG00000113300|ENST00000261951|CNOT6	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.2979431152344	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.071	1	59.071	58.571	59.571	0								0	0	0	0.29273	1	5132	5132		40.778	0.20554	1		+		16293	17988	11134	11143	18824	18824					0.08914333339942004
IGLTTLPPV	9	Unmodified	_IGLTTLPPV_					0	0	0		ENSG00000135723|ENST00000258201|FHOD1	ENSG00000135723|ENST00000258201|FHOD1	ENSG00000135723|ENST00000258201|FHOD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.784423828125	2	455.784036	909.553519	-2.4291	-0.0011071	3.9811	0.0018145	1.552	0.00070738	455.7856610041375	42.193	1.6759	42.607	41.973	43.649	0.4139					65	41	2	0	0	0	0.7932	1	3728	3728		25.45	8.0852	1	3100600			16294	4048	11135	11144	18825	18825					0.0951243007971243
IGLTVPLLT	9	Unmodified	_IGLTVPLLT_					0	0	0			REV__ENSG00000130287|ENST00000252575|NCAN	REV__ENSG00000130287|ENST00000252575|NCAN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.80108642578125	2	463.799686	925.584819	-1.9529	-0.00090576	3.5624	0.0016523	1.6095	0.0007465	463.801178460678	42.067	1.8831	42.764	41.947	43.83	0.69754					154	47	4	0	0	0	0.74721	1	3799	3799		37.159	5.2042	1	6253400	+		16295	18863	11136	11145	18826	18826					0.11905003113804469
IGLVALKLGVP	11	Unmodified	_IGLVALKLGVP_					0	0	0			REV__nc|ENSG00000186007|Q68G75-3|LEMD1	REV__nc|ENSG00000186007|Q68G75-3|LEMD1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.3638916015625	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.856	1	44.905	44.405	45.405	0.048996								0	0	0	0.56276	1	3192	3192		14.865	3.9993	1		+		16296	22817	11137	11146	18827	18827					0.17520929338934366
IGLVIKHLFLT	11	Unmodified	_IGLVIKHLFLT_					0	0	0			REV__ENST00000518114.1_1_2:190619886-190627438:-|nuORF	REV__ENST00000518114.1_1_2:190619886-190627438:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.60498046875	3	418.604186	1252.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.931	1	49.907	49.407	50.407	-0.024033								0	0	0	0.56276	1	4299	4299		24.232	0.85391	1		+		16297	18789	11138	11147	18828	18828					0.1744457629306453
IGLVIKHLFLT	11	Unmodified	_IGLVIKHLFLT_					0	0	0			REV__ENST00000518114.1_1_2:190619886-190627438:-|nuORF	REV__ENST00000518114.1_1_2:190619886-190627438:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.27020263671875	3	418.604186	1252.79073	-0.49087	-0.00020548	1.573	0.00065845	1.0821	0.00045297	418.60471602705576	48.651	1.0032	48.558	47.807	48.811	-0.093178					33	24	2	0	0	0	0.17643	1	3719	3719		8.7993	1.7806	1	88929	+		16298	18789	11138	11147	18829	18829					0.1744457629306453
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7799987792969	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.90465	1	2797	2797		40.573	0	1	2581600	+		16299	19269	11139	11148	18830	18830					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7799987792969	2	434.778754	867.542954	-1.8344	-0.00079754	4.3253	0.0018805	2.4909	0.001083	434.7805085345101	43.07	1.706	43.07	42.535	44.241	0					126	41	4	0	0	0	0.90465	1	3049	3049		40.573	0	1	2514600	+		16300	19269	11139	11148	18831	18831					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801208496094	2	434.778754	867.542954	0.048931	2.1274E-05	3.263	0.0014187	3.312	0.00144	434.780055906595	38.381	1.4097	38.353	37.994	39.403	-0.027843					122	32	4	0	0	0	0.88944	1	2595	2595		57.811	0	1	2404700	+		16301	19269	11139	11148	18832	18832					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7795715332031	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.90465	1	3054	3054		40.573	0	1	2938700	+		16302	19269	11139	11148	18833	18833					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7797546386719	2	434.778754	867.542954	0.20501	8.9135E-05	2.1081	0.00091654	2.3131	0.0010057	434.77952396468385	43.343	2.099	43.316	42.291	44.39	-0.026768					151	50	4	0	0	0	0.89962	2	3288	3276;3288		42.474	1.7777	1	2133200	+		16303	19269	11139	11148	18834;18835	18835					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801513671875	2	434.778754	867.542954	-0.61894	-0.0002691	3.8256	0.0016633	3.2067	0.0013942	434.7803762451805	34.577	0.94073	34.521	33.912	34.853	-0.056381					81	20	5	0	0	0	0.89494	3	2162	2162;2174;2186		47.916	3.6435	1	3842800	+		16304	19269	11139	11148	18836;18837;18838	18836					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7798156738281	2	434.778754	867.542954	-0.97237	-0.00042277	4.234	0.0018408	3.2616	0.0014181	434.7805193577322	37.104	1.6925	37.05	36.066	37.758	-0.053555					155	37	5	0	0	0	0.87064	2	2419	2419;2476		40.573	0	1	5510500	+		16305	19269	11139	11148	18839;18840	18839					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801513671875	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.89962	1	3907	3907		38.806	5.2906	1	2468400	+		16306	19269	11139	11148	18841	18841					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7799072265625	2	434.778754	867.542954	-0.81007	-0.0003522	3.4341	0.0014931	2.624	0.0011409	434.7801064754335	48.077	2.7534	48.052	47.541	50.295	-0.025112					179	68	4	0	0	0	0.87922	1	4086	4086		31.955	0	1	1940000	+		16307	19269	11139	11148	18842	18842					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801513671875	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.91005	1	2108	2108		42.474	0	1	3951300	+		16308	19269	11139	11148	18843	18843					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77972412109375	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.87064	1	3489	3489		29.15	0	1	2165200	+		16309	19269	11139	11148	18844	18844					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77984619140625	2	434.778754	867.542954	1.0906	0.00047416	1.4824	0.00064451	2.573	0.0011187	434.77927379886756	45.133	1.9101	45.129	44.288	46.198	-0.0041618					129	44	4	0	0	0	0.92457	1	3572	3572		47.916	1.9636	1	1333000	+		16310	19269	11139	11148	18845	18845					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77935791015625	2	434.778754	867.542954	1.3776	0.00059897	1.1215	0.0004876	2.4991	0.0010866	434.7791184687597	46.776	1.6866	46.772	46.112	47.798	-0.0041618					148	47	4	0	0	0	0.87479	5	3724	3724;3737;3767;3791;3890		50.025	3.7075	1	2109000	+		16311	19269	11139	11148	18846;18847;18848;18849;18850	18846					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77960205078125	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.90465	1	4114	4114		40.573	0	1	1803700	+		16312	19269	11139	11148	18851	18851					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7798156738281	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.884	1	3755	3755		33.516	0	1	1959200	+		16313	19269	11139	11148	18852	18852					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7776184082031	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.89962	1	1931	1931		38.806	0	1	2251100	+		16314	19269	11139	11148	18853	18853					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77960205078125	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.87922	2	3366	3366;3570		31.955	5.1588	1	2750200	+		16315	19269	11139	11148	18854;18855	18854					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.884	1	3657	3657		33.516	0	1	1986600	+		16316	19269	11139	11148	18856	18856					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7802734375	2	434.778754	867.542954	0.083396	3.6259E-05	3.2514	0.0014137	3.3348	0.0014499	434.78005466270537	34.317	1.0002	34.271	33.763	34.763	-0.045815					125	41	4	0	0	0	0.88944	1	1715	1715		57.811	7.7867	1	3033400	+		16317	19269	11139	11148	18857	18857					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78009033203125	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.87922	2	1990	1990;2000		35.618	2.1027	1	4750000	+		16318	19269	11139	11148	18858;18859	18858					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77978515625	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.87922	1	2715	2715		31.955	0	1	2793300	+		16319	19269	11139	11148	18860	18860					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77947998046875	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.884	1	3734	3734		33.516	0	1	2175000	+		16320	19269	11139	11148	18861	18861					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7798767089844	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.87922	2	2451	2451;2485		35.201	6.9464	1	7451800	+		16321	19269	11139	11148	18862;18863	18862					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78057861328125	2	434.778754	867.542954	1.7459	0.00075909	2.0876	0.00090764	3.8335	0.0016667	434.7795583562852	36.032	2.5113	36.473	35.233	37.744	0.44043					149	62	4	0	0	0	0.89494	1	2745	2745		37.159	5.2042	1	9979000	+		16322	19269	11139	11148	18864	18864					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77996826171875	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.88915	1	3526	3526		35.201	0	1	15771000	+		16323	19269	11139	11148	18865	18865					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7806091308594	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.884	1	3633	3633		33.516	0	1	6824500	+		16324	19269	11139	11148	18866	18866					0.10388447425282266
IGLVKLPE	8	Unmodified	_IGLVKLPE_					0	0	0			REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	REV__ENST00000473202.1_1_2:224847347-224847473:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77679443359375	2	434.778754	867.542954	-1.4872	-0.00064659	2.9694	0.001291	1.4823	0.00064445	434.7799081673859	43.398	0.96524	44.172	43.498	44.463	0.7738					64	23	3	0	0	0	0.87479	1	3976	3976		30.504	0	1	2227600	+		16325	19269	11139	11148	18867	18867					0.10388447425282266
IGLVLPSLG	9	Unmodified	_IGLVLPSLG_					0	0	0			REV__nc|ENSG00000198715|Q8WWB7-2|GLMP	REV__nc|ENSG00000198715|Q8WWB7-2|GLMP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7795715332031	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.67235	1	3437	3437		42.474	0	1	1294000	+		16326	23360	11140	11149	18868	18868					0.10388447425305003
IGLVLPSLG	9	Unmodified	_IGLVLPSLG_					0	0	0			REV__nc|ENSG00000198715|Q8WWB7-2|GLMP	REV__nc|ENSG00000198715|Q8WWB7-2|GLMP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77984619140625	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.7932	1	2826	2826		26.796	0	1	2524800	+		16327	23360	11140	11149	18869	18869					0.10388447425305003
IGLVLPSLG	9	Unmodified	_IGLVLPSLG_					0	0	0			REV__nc|ENSG00000198715|Q8WWB7-2|GLMP	REV__nc|ENSG00000198715|Q8WWB7-2|GLMP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7796630859375	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.7932	1	3363	3363		26.796	0	1	2364100	+		16328	23360	11140	11149	18870	18870					0.10388447425305003
IGLVPEIK	8	Unmodified	_IGLVPEIK_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77947998046875	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.90465	1	3030	3030		40.573	5.3719	1	2938700	+		16329	21174	11141	11150	18871	18871					0.10388447425282266
IGLVPEIK	8	Unmodified	_IGLVPEIK_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.78009033203125	2	434.778754	867.542954	0.15311	6.6568E-05	3.0229	0.0013143	3.176	0.0013809	434.7799826029187	37.007	1.7817	37.018	36.075	37.857	0.011173					164	39	5	0	0	0	0.90465	1	2545	2545		40.573	5.3719	1	5259900	+		16330	21174	11141	11150	18872	18872					0.10388447425282266
IGLVPEIK	8	Unmodified	_IGLVPEIK_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77972412109375	2	434.778754	867.542954	1.0906	0.00047416	1.4824	0.00064451	2.573	0.0011187	434.77927379886756	45.133	1.9101	45.129	44.288	46.198	-0.0041618					129	44	4	0	0	0	0.89494	1	3560	3560		37.159	1.9584	1	1333000	+		16331	21174	11141	11150	18873	18873					0.10388447425282266
IGLVPEIK	8	Unmodified	_IGLVPEIK_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7803955078125	2	434.778754	867.542954	0.12745	5.5413E-05	3.4254	0.0014893	3.5528	0.0015447	434.7800727481765	33.235	0.77096	33.345	33.052	33.823	0.10991					78	32	3	0	0	0	0.82658	1	1621	1621		21.96	2.5999	1	320750	+		16332	21174	11141	11150	18874	18874					0.10388447425282266
IGLVPEIK	8	Unmodified	_IGLVPEIK_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799987792969	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.7961	1	2130	2130		17.365	1.7287	1	4750000	+		16333	21174	11141	11150	18875	18875					0.10388447425282266
IGLVPEIK	8	Unmodified	_IGLVPEIK_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7803039550781	2	434.778754	867.542954	-0.10818	-4.7034E-05	3.1846	0.0013846	3.0765	0.0013376	434.7800213108271	39.594	1.7303	39.546	38.941	40.672	-0.04789					162	53	5	0	0	0	0.87922	1	2388	2388		31.955	5.1588	1	5065300	+		16334	21174	11141	11150	18876	18876					0.10388447425282266
IGLVPEIK	8	Unmodified	_IGLVPEIK_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77960205078125	2	434.778754	867.542954	-0.29603	-0.00012871	3.1388	0.0013647	2.8428	0.001236	434.77998100939635	44.91	1.6932	44.842	44.077	45.77	-0.068634					139	41	4	0	0	0	0.87479	1	3134	3134		30.504	0.6621	1	1190800	+		16335	21174	11141	11150	18877	18877					0.10388447425282266
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7797546386719	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.7932	1	2970	2970		26.796	0	1	2581600			16336	5094	11142	11151	18878	18878					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801208496094	2	434.778754	867.542954	0.048931	2.1274E-05	3.263	0.0014187	3.312	0.00144	434.780055906595	38.381	1.4097	38.353	37.994	39.403	-0.027843					122	32	4	0	0	0	0.5393	1	2585	2585		50.025	7.5501	1	2404700			16337	5094	11142	11151	18879	18879					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7798156738281	2	434.778754	867.542954	0.13644	5.932E-05	2.2845	0.00099327	2.421	0.0010526	434.77963633612353	39.861	1.5425	39.83	39.322	40.865	-0.03027					156	40	5	0	0	0	0.76996	1	2841	2841		33.516	0	1	4621500			16338	5094	11142	11151	18880	18880					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7793884277344	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.76402	3	3018	3018;3090;3139		35.201	1.6851	1	2938700			16339	5094	11142	11151	18881;18882;18883	18881					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77947998046875	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.76996	2	3814	3814;3854		33.516	0	1	2017500			16340	5094	11142	11151	18884;18885	18884					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7797546386719	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.511	1	57.497	56.997	57.997	-0.013641								0	0	0	0.31088	1	5200	5200		26.796	0	1				16341	5094	11142	11151	18886	18886					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.780029296875	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.621	1	57.607	57.107	58.107	-0.013641								0	0	0	0.2969	1	5215	5215		31.955	0	1				16342	5094	11142	11151	18887	18887					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7800598144531	2	434.778754	867.542954	-0.47801	-0.00020783	4.1901	0.0018218	3.7121	0.0016139	434.78031491435894	33.573	1.1529	33.517	32.851	34.004	-0.056385					70	27	4	0	0	0	0.7932	1	2055	2055		25.45	0	1	421000			16343	5094	11142	11151	18888	18888					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7802429199219	2	434.778754	867.542954	-0.97237	-0.00042277	4.234	0.0018408	3.2616	0.0014181	434.7805193577322	37.104	1.6925	37.05	36.066	37.758	-0.053555					155	37	5	0	0	0	0.76402	1	2548	2548		35.201	1.6851	1	5510500			16344	5094	11142	11151	18889	18889					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77972412109375	2	434.778754	867.542954	-1.2494	-0.00054321	3.5325	0.0015359	2.2831	0.00099266	434.7801616022163	41.477	1.7868	41.436	40.922	42.709	-0.04081					147	45	4	0	0	0	0.67235	4	3104	3082;3104;3151;3176		42.474	5.3592	1	2800900			16345	5094	11142	11151	18890;18891;18892;18893	18891					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7798156738281	2	434.778754	867.542954	-1.1228	-0.00048815	3.4102	0.0014827	2.2874	0.00099453	434.7801032015678	43.351	2.0206	43.315	42.595	44.616	-0.035816					155	47	4	0	0	0	0.67235	1	3389	3389		42.474	0	1	2016300			16346	5094	11142	11151	18894	18894					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7798156738281	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.76996	1	3926	3926		33.516	0	1	2468400			16347	5094	11142	11151	18895	18895					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7795104980469	2	434.778754	867.542954	-0.81007	-0.0003522	3.4341	0.0014931	2.624	0.0011409	434.7801064754335	48.077	2.7534	48.052	47.541	50.295	-0.025112					179	68	4	0	0	0	0.76402	1	4171	4171		35.201	1.6851	1	1940000			16348	5094	11142	11151	18896	18896					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7792663574219	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.647	1	57.617	57.117	58.117	-0.029865								0	0	0	0.31472	1	5326	5326		25.45	0	1				16349	5094	11142	11151	18897	18897					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7799377441406	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.999	1	57.97	57.47	58.47	-0.029865								0	0	0	0.29103	1	5374	5374		40.573	0	1				16350	5094	11142	11151	18898	18898					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801818847656	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.7932	1	2198	2198		25.45	0	1	3951300			16351	5094	11142	11151	18899	18899					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.78021240234375	2	434.778754	867.542954	-0.14051	-6.1091E-05	3.4383	0.0014949	3.2978	0.0014338	434.7801225093181	38.257	1.3722	38.268	37.812	39.184	0.011173					116	31	4	0	0	0	0.67235	1	2579	2579		42.474	0	1	2138600			16352	5094	11142	11151	18900	18900					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7798767089844	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.76402	2	3096	3096;3133		35.201	5.3592	1	2766200			16353	5094	11142	11151	18901;18902	18901					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7796325683594	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.76402	1	3308	3308		35.201	0	1	2165200			16354	5094	11142	11151	18903	18903					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77978515625	2	434.778754	867.542954	1.3776	0.00059897	1.1215	0.0004876	2.4991	0.0010866	434.7791184687597	46.776	1.6866	46.772	46.112	47.798	-0.0041618					148	47	4	0	0	0	0.67235	2	3873	3873;3916		42.474	0	1	2109000			16355	5094	11142	11151	18904;18905	18904					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77984619140625	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.76996	1	4006	4006		33.516	0	1	1803700			16356	5094	11142	11151	18906	18906					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7798767089844	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.76996	1	2699	2699		33.516	0	1	2524800			16357	5094	11142	11151	18907	18907					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7799377441406	2	434.778754	867.542954	-1.6369	-0.00071169	4.2666	0.001855	2.6297	0.0011433	434.7804825082367	43.238	1.5673	43.244	42.525	44.093	0.0057526					133	41	4	0	0	0	0.76402	2	2955	2900;2955		35.201	0	1	2391100			16358	5094	11142	11151	18908;18909	18909					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78021240234375	2	434.778754	867.542954	0.18498	8.0427E-05	2.9584	0.0012863	3.1434	0.0013667	434.7799222967292	39.501	1.6389	39.589	38.953	40.592	0.088375					151	45	4	0	0	0	0.67235	3	2400	2400;2523;2534		42.474	0	1	4736600			16359	5094	11142	11151	18910;18911;18912	18910					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7796325683594	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.76402	2	2644	2581;2644		35.201	1.3459	1	2513700			16360	5094	11142	11151	18913;18914	18914					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77960205078125	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.7932	1	3118	3118		25.45	0	1	1327200			16361	5094	11142	11151	18915	18915					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801818847656	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.76402	1	3396	3396		35.201	0	1	2750200			16362	5094	11142	11151	18916	18916					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799987792969	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.69914	3	2157	2008;2055;2157		40.573	0	1	4750000			16363	5094	11142	11151	18917;18918;18919	18919					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7800598144531	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.67235	1	2277	2277		42.474	0	1	2486400			16364	5094	11142	11151	18920	18920					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7793884277344	2	434.778754	867.542954	-0.10818	-4.7034E-05	3.1846	0.0013846	3.0765	0.0013376	434.7800213108271	39.594	1.7303	39.546	38.941	40.672	-0.04789					162	53	5	0	0	0	0.76402	2	2539	2539;2549		35.201	1.6851	1	5065300			16365	5094	11142	11151	18921;18922	18921					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.779541015625	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.76996	3	2601	2601;2682;2762		33.516	6.0902	1	2793300			16366	5094	11142	11151	18923;18924;18925	18923					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77996826171875	2	434.778754	867.542954	-0.23402	-0.00010175	2.835	0.0012326	2.601	0.0011308	434.77987896985167	43.157	1.7547	43.107	42.38	44.135	-0.050308					136	44	4	0	0	0	0.67235	2	2972	2895;2972		42.474	0	1	2479900			16367	5094	11142	11151	18926;18927	18927					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801513671875	2	434.778754	867.542954	-0.61408	-0.00026699	3.3286	0.0014472	2.7146	0.0011802	434.78015323105376	52.924	3.3917	52.849	52.471	55.862	-0.074512					147	100	2	0	0	0	0.7932	1	4306	4306		24.203	0	1	526750			16368	5094	11142	11151	18928	18928					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801818847656	2	434.778754	867.542954	0.35961	0.00015635	3.3799	0.0014695	3.7395	0.0016259	434.78011136196255	36.165	2.4395	36.447	35.432	37.871	0.28173					211	60	5	0	0	0	0.76402	2	2889	2827;2889		35.201	0	1	8602100			16369	5094	11142	11151	18929;18930	18930					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7787780761719	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.76996	3	3433	3433;3445;3533		33.516	6.7195	1	17256000			16370	5094	11142	11151	18931;18932;18933	18931					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7802734375	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.76402	2	3598	3598;3686		35.201	6.9464	1	6567600			16371	5094	11142	11151	18934;18935	18934					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7777404785156	2	434.778754	867.542954	-0.97799	-0.00042521	2.2819	0.00099211	1.3039	0.0005669	434.7796012796187	43.693	1.006	44.143	43.436	44.442	0.45024					66	24	3	0	0	0	0.77546	2	3964	3964;3987		31.955	1.8513	1	2290300			16372	5094	11142	11151	18936;18937	18936					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7795104980469	2	434.778754	867.542954	-0.86763	-0.00037723	3.3995	0.001478	2.5319	0.0011008	434.78009785486137	45.83	1.5338	46.301	45.603	47.137	0.47139					107	37	4	0	0	0	0.64338	6	4274	4253;4263;4274;4285;4298;4310		44.531	9.3304	1	3309700			16373	5094	11142	11151	18938;18939;18940;18941;18942;18943	18940					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801513671875	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.67235	1	2521	2521		42.474	0	1	7451800			16374	5094	11142	11151	18944	18944					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7806091308594	2	434.778754	867.542954	1.7459	0.00075909	2.0876	0.00090764	3.8335	0.0016667	434.7795583562852	36.032	2.5113	36.473	35.233	37.744	0.44043					149	62	4	0	0	0	0.67235	3	2721	2711;2721;2769		42.474	8.9589	1	9979000			16375	5094	11142	11151	18945;18946;18947	18946					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7806396484375	2	434.778754	867.542954	0.24981	0.00010861	3.5134	0.0015276	3.7632	0.0016362	434.78017285768743	37.739	1.2173	38.259	37.943	39.16	0.51989					114	30	4	0	0	0	0.76402	2	3109	3109;3121		35.201	0	1	8689200			16376	5094	11142	11151	18948;18949	18948					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7798156738281	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.76402	3	3679	3550;3679;3825		35.201	7.4361	1	6824500			16377	5094	11142	11151	18950;18951;18952	18951					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7800598144531	2	434.778754	867.542954	-0.91901	-0.00039957	3.2028	0.0013925	2.2837	0.00099292	434.7800246732522	44.2	1.4198	45.044	44.534	45.954	0.84437					118	34	4	0	0	0	0.7932	1	4157	4157		26.796	6.3143	1	4932000			16378	5094	11142	11151	18953	18953					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77978515625	2	434.778754	867.542954	-0.35442	-0.0001541	2.9005	0.0012611	2.5461	0.001107	434.7798953065686	45.578	1.4443	46.473	45.883	47.327	0.89542					104	35	4	0	0	0	0.49378	3	4223	4223;4251;4262		52.299	9.8247	1	4040300			16379	5094	11142	11151	18954;18955;18956	18954					0.10388447425293634
IGLVTPLGV	9	Unmodified	_IGLVTPLGV_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.7849	-0.00077603	4.4985	0.0019558	2.7136	0.0011798	434.78057745982073	46.518	1.8304	46.518	45.858	47.688	0	0.020018	0.0012511	NaN	52.299	159	56	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2646400			16380	5094	11142	11151							0.10388447425293634
IGMESAGIHE	10	Oxidation (M)	_IGM(Oxidation (M))ESAGIHE_		IGM(1)ESAGIHE		IGM(85)ESAGIHE	0	0	1		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2424926757812	2	530.242406	1058.47026	0.06014	3.1889E-05	0.15999	8.4835E-05	0.22013	0.00011672	530.2422169624201	34.032	0.63956	34.027	33.737	34.376	-0.0047417					30	14	3	0	0	0	0.20477	3	2019	2010;2019;2031		84.916	21.609	1	174630			16381	2370	11143	11152	18957;18958;18959	18958		45			-0.056636744304796593
IGMESAGIHE	10	Oxidation (M)	_IGM(Oxidation (M))ESAGIHE_		IGM(1)ESAGIHE		IGM(55)ESAGIHE	0	0	1		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2423095703125	2	530.242406	1058.47026	0.065885	3.4935E-05	0.094011	4.9849E-05	0.1599	8.4784E-05	530.2421087009296	34.094	0.70897	34.038	33.785	34.494	-0.056385					31	15	3	0	0	0	0.51302	2	2127	2109;2127		54.776	10.498	1	210830			16382	2370	11143	11152	18960;18961	18961		45			-0.056636744304796593
IGMESAGIHE	10	Oxidation (M)	_IGM(Oxidation (M))ESAGIHE_		IGM(1)ESAGIHE		IGM(85)ESAGIHE	0	0	1		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2420043945312	2	530.242406	1058.47026	-0.14444	-7.6588E-05	0.18466	9.7912E-05	0.040215	2.1324E-05	530.2422664098204	33.992	0.67593	33.995	33.706	34.382	0.0026016					33	14	3	0	0	0	0.20477	2	2043	2031;2043		84.916	24.512	1	176270			16383	2370	11143	11152	18962;18963	18963		45			-0.056636744304796593
IGMESAGIHE	10	Oxidation (M)	_IGM(Oxidation (M))ESAGIHE_					0	0	1		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	530.242406	1058.47026	-0.17354	-9.2016E-05	1.7351	0.00092	1.5615	0.00082799	530.2428548034862	34.086	0.063488	34.132	34.093	34.157	0.045849	0.084182	0.0016428	NaN	84.916	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27068			16384	2370	11143	11152				45			-0.056636744304796593
IGNPALQH	8	Unmodified	_IGNPALQH_					0	0	0			REV__ENSG00000133958|ENST00000695012|UNC79	REV__ENSG00000133958|ENST00000695012|UNC79	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	425.2356872558594	2	425.232502	848.450451	-1.8154	-0.00077197	3.7641	0.0016006	1.9487	0.00082865	425.234002862531	34.365	0.76041	34.404	34.031	34.791	0.038639					63	32	3	0	0	0	0.86288	1	1743	1743		26.796	0	1	190950	+		16385	19104	11144	11153	18964	18964					0.020163624117685686
IGNQLHKK	8	Unmodified	_IGNQLHKK_					0	0	0			REV__nc|ENSG00000171587|O60469-2|DSCAM	REV__nc|ENSG00000171587|O60469-2|DSCAM	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	469.28369140625	2	469.282526	936.550499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.74	1	18.814	18.314	19.314	0.073465								0	0	0	0.29568	1	323	323		35.201	13.241	1		+		16386	21753	11145	11154	18965	18965					0.07968599745561278
IGPAILLGP	9	Unmodified	_IGPAILLGP_					0	0	0			REV__chr1:159068701-159076633|18|15.22|0.35|5.45|-|1|AIM2,AIM2|1	REV__chr1:159068701-159076633|18|15.22|0.35|5.45|-|1|AIM2,AIM2|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.29486083984375	2	425.773471	849.53239	-1.3326	-0.00056737	-0.62	-0.00026398	-1.9526	-0.00083135	425.7754437620036	73.172	0.59596	73.255	72.818	73.414	0.083145					29	20	2	0	0	0	0.20789	1	6701	6701		29.842	0	1	60641	+		16387	15420	11146	11155	18966	18966					0.10160464770842736
IGPEGDMH	8	Unmodified	_IGPEGDMH_					0	0	0		nc|ENSG00000132840|Q9H2M3-2|BHMT2;ENSG00000132840|ENST00000255192|BHMT2	nc|ENSG00000132840|Q9H2M3-2|BHMT2	nc|ENSG00000132840|Q9H2M3-2|BHMT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.1888427734375	2	428.186903	854.359253	1.3941	0.00059693	3.0677	0.0013135	4.4618	0.0019105	428.18814561679375	93.816	1.6244	94.257	93.23	94.854	0.441					80	42	2	0	0	0	0.86288	1	11143	11143		26.796	0	1	1318500			16388	3833	11147	11156	18967	18967					-0.0737526934788093
IGQKFNEKL	9	Unmodified	_IGQKFNEKL_					0	0	0		nc|ENSG00000185658|Q9NSI6-3|BRWD1;ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1	nc|ENSG00000185658|Q9NSI6-3|BRWD1	nc|ENSG00000185658|Q9NSI6-3|BRWD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.8065795898438	2	538.808574	1075.60259	0.74987	0.00040403	-4.2313	-0.0022799	-3.4814	-0.0018758	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.69624	1	9082	9082		40.778	0.20554	1	840570			16389	7732	11148	11157	18968	18968					0.06781718368665679
IGQLGMPGPPG	11	Unmodified	_IGQLGMPGPPG_					0	0	0			REV__ENSG00000050767|ENST00000390654|COL23A1	REV__ENSG00000050767|ENST00000390654|COL23A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.2697143554688	2	512.268227	1022.5219	2.157	0.001105	2.613	0.0013385	4.77	0.0024435	512.2694110072075	106.86	1.3321	106.96	106.54	107.87	0.10396					84	53	2	0	0	0	0.72918	1	13016	13016		26.693	1.1189	1	212630	+		16390	16379	11149	11158	18969	18969					0.011541140541226014
IGREREAKLK	10	Unmodified	_IGREREAKLK_					0	0	0			REV__ENST00000513637.1_1_5:43496220-43496412:-|nuORF	REV__ENST00000513637.1_1_5:43496220-43496412:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.580322265625	3	400.578811	1198.7146	0.73408	0.00029406	3.5327	0.0014151	4.2667	0.0017092	400.5800545644303	111.89	0.61595	111.96	111.53	112.15	0.069542					52	18	4	0	0	0	0.8492	1	12068	12068		18.531	1.3643	1	4655100	+		16391	17255	11150	11159	18970	18970					0.12319572445630911
IGRGEAVLSTT	11	Unmodified	_IGRGEAVLSTT_					0	0	0			REV__ENST00000382247.5_1_4:17812117-17812297:-|nuORF	REV__ENST00000382247.5_1_4:17812117-17812297:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.30615234375	2	552.306395	1102.59824	0.78014	0.00043088	-0.74693	-0.00041253	0.033219	1.8347E-05	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.73893	1	9381	9381		24.519	0	1	1841700	+		16392	25974	11151	11160	18971	18971					0.05104209155092576
IGRIKEQSA	9	Unmodified	_IGRIKEQSA_					0	0	0		ENSG00000198793|ENST00000361445|MTOR	ENSG00000198793|ENST00000361445|MTOR	ENSG00000198793|ENST00000361445|MTOR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2904968261719	2	501.290548	1000.56654	-0.50774	-0.00025453	0.15503	7.7713E-05	-0.35272	-0.00017681	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.77244	1	8095	8095		32.812	1.2826	1	3014100			16393	8334	11152	11161	18972	18972					0.06628261191792717
IGRIKEQSA	9	Unmodified	_IGRIKEQSA_					0	0	0		ENSG00000198793|ENST00000361445|MTOR	ENSG00000198793|ENST00000361445|MTOR	ENSG00000198793|ENST00000361445|MTOR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.290283203125	2	501.290548	1000.56654	-1.4828	-0.00074334	1.1379	0.00057041	-0.34496	-0.00017293	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.69624	1	8158	8158		40.778	2.9666	1	2793500			16394	8334	11152	11161	18973	18973					0.06628261191792717
IGRIKEQSA	9	Unmodified	_IGRIKEQSA_					0	0	0		ENSG00000198793|ENST00000361445|MTOR	ENSG00000198793|ENST00000361445|MTOR	ENSG00000198793|ENST00000361445|MTOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2908020019531	2	501.290548	1000.56654	0.16565	8.304E-05	-0.064258	-3.2212E-05	0.10139	5.0828E-05	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.69624	1	9785	9785		40.778	4.3314	1	2717900			16395	8334	11152	11161	18974	18974					0.06628261191792717
IGRIKKFV	8	Unmodified	_IGRIKKFV_					0	0	0			REV__nc|ENSG00000168710|O43865-2|AHCYL1	REV__nc|ENSG00000168710|O43865-2|AHCYL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8006896972656	2	480.821287	959.628021	0.73335	0.00035261	2.2497	0.0010817	2.9831	0.0014343	480.82229904309173	95.194	0.28143	95.357	95.151	95.433	0.16308					9	6	2	0	0	0	0.4196	1	9758	9758		20.482	4.8456	1	56827	+		16396	21513	11153	11162	18975	18975					0.14659237681746617
IGRLWRKDKYD	11	Unmodified	_IGRLWRKDKYD_					0	0	0		ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.9363098144531	3	483.936887	1448.78883	0.29283	0.00014171	-1.4405	-0.00069712	-1.1477	-0.00055541	483.93614911946725	42.975	1.1574	42.945	42.605	43.763	-0.029461					80	27	4	0	0	0	0.6396	1	3246	3246		39.873	10.322	1	1754600			16397	1670	11154	11163	18976	18976					0.08238915537162939
IGRLWRKDKYD	11	Unmodified	_IGRLWRKDKYD_					0	0	0		ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	483.936887	1448.78883	-1.6817	-0.00081384	0.82167	0.00039764	-0.86004	-0.0004162	483.93715421593146	42.739	0.76324	42.739	42.497	43.26	0	-0.20057	0.0015043	NaN	39.873	32	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85004			16398	1670	11154	11163							0.08238915537162939
IGRLWRKDKYD	11	Unmodified	_IGRLWRKDKYD_					0	0	0		ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	483.936887	1448.78883	-0.84226	-0.0004076	-0.69922	-0.00033838	-1.5415	-0.00074598	483.9367694340543	43.029	0.61063	43.035	42.778	43.388	0.0057526	0.095731	-0.00070378	NaN	39.873	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79024			16399	1670	11154	11163							0.08238915537162939
IGRLWRKDKYD	11	Unmodified	_IGRLWRKDKYD_					0	0	0		ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	483.936887	1448.78883	0.26531	0.00012839	-1.4628	-0.00070792	-1.1975	-0.00057952	483.93628062871744	42.928	0.40621	42.993	42.786	43.192	0.065037	0.053846	-0.0018124	NaN	39.873	18	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142720			16400	1670	11154	11163							0.08238915537162939
IGRLWRKDKYD	11	Unmodified	_IGRLWRKDKYD_					0	0	0		ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	483.936887	1448.78883	-0.06344	-3.0701E-05	-0.2408	-0.00011653	-0.30424	-0.00014723	484.27114269334743	42.909	0.57646	42.859	42.606	43.182	-0.050308	-0.080535	-3.8233E-05	NaN	39.873	24	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86031			16401	1670	11154	11163							0.08238915537162939
IGRQLELEIE	10	Unmodified	_IGRQLELEIE_					0	0	0			REV__ENSG00000166123|ENST00000340124|GPT2	REV__ENSG00000166123|ENST00000340124|GPT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	600.3331298828125	2	600.335153	1198.65575	0.97496	0.0005853	-3.1335	-0.0018811	-2.1585	-0.0012958	600.3333001736194	93.972	2.6072	94.2	93.361	95.968	0.22863					134	62	3	0	0	0	0.82886	1	9596	9596		37.812	1.3648	1	602950	+		16402	21252	11155	11164	18977	18977					0.0643705136067183
IGRSKKKSD	9	Unmodified	_IGRSKKKSD_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80377197265625	2	509.803823	1017.59309	-0.89954	-0.00045859	0.77889	0.00039708	-0.12065	-6.1507E-05	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.78528	1	8170	8170		29.17	0.91578	1	1874600	+		16403	17833	11156	11165	18978	18978					0.08499950083137264
IGRSKKKSD	9	Unmodified	_IGRSKKKSD_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8037109375	2	509.803823	1017.59309	1.253	0.0006388	-1.454	-0.00074124	-0.20094	-0.00010244	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.75725	1	8878	8878		36.447	9.7538	1	3243500	+		16404	17833	11156	11165	18979	18979					0.08499950083137264
IGRSKKKSD	9	Unmodified	_IGRSKKKSD_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8036804199219	2	509.803823	1017.59309	0.22319	0.00011378	-0.42853	-0.00021847	-0.20534	-0.00010468	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.51307	3	8903	8855;8867;8903		51.335	14.176	1	3453000	+		16405	17833	11156	11165	18980;18981;18982	18982					0.08499950083137264
IGRSLKRS	8	Unmodified	_IGRSLKRS_					0	0	0		ENST00000508743.1_1_17:46969858-46986323:-|nuORF	ENST00000508743.1_1_17:46969858-46986323:-|nuORF	ENST00000508743.1_1_17:46969858-46986323:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.7874755859375	2	458.787976	915.561398	-1.7492	-0.00080251	0.76438	0.00035069	-0.98482	-0.00045182	458.7883137610394	92.976	2.4972	93.168	92.52	95.017	0.19239					169	59	5	0	0	0	0.84341	1	9387	9387		24.203	0	1	11606000			16406	12979	11157	11166	18983	18983					0.10024002119860143
IGRSLKRS	8	Unmodified	_IGRSLKRS_					0	0	0		ENST00000508743.1_1_17:46969858-46986323:-|nuORF	ENST00000508743.1_1_17:46969858-46986323:-|nuORF	ENST00000508743.1_1_17:46969858-46986323:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.78778076171875	2	458.787976	915.561398	-0.56463	-0.00025905	0.14629	6.7115E-05	-0.41835	-0.00019193	458.7879697200244	92.862	1.6326	93.312	92.732	94.365	0.44989					129	38	4	0	0	0	0.90983	1	11074	11074		42.396	5.3677	1	6441800			16407	12979	11157	11166	18984	18984					0.10024002119860143
IGRSSALLLRR	11	Unmodified	_IGRSSALLLRR_					0	0	0			REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2	REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3935546875	2	621.39367	1240.77279	0.9213	0.00057249	-2.6214	-0.0016289	-1.7001	-0.0010564	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.7434	1	11240	11240		23.523	3.5259	1	22352000	+		16408	30147	11158	11167	18985	18985					0.16203254090919472
IGRTPRRA	8	Unmodified	_IGRTPRRA_					0	0	0			REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.78179931640625	2	463.785767	925.556982	-1.8479	-0.00085701	-4.171	-0.0019344	-6.0188	-0.0027914	463.78371737695124	38.647	1.1354	38.647	38.448	39.584	0					31	27	2	0	0	0	0.81897	1	2411	2411		20.947	0	1	50487	+		16409	30248	11159	11168	18986	18986					0.09122537696930522
IGRTPRRA	8	Unmodified	_IGRTPRRA_					0	0	0			REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	463.785767	925.556982	-1.8479	-0.00085701	-4.171	-0.0019344	-6.0188	-0.0027914	463.78371737695124	38.647	1.1354	38.647	38.448	39.584	0	-0.18664	0.0010827	NaN	20.947	31	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50487	+		16410	30248	11159	11168							0.09122537696930522
IGRTPRRA	8	Unmodified	_IGRTPRRA_					0	0	0			REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	463.785767	925.556982	0.11522	5.3435E-05	-6.7603	-0.0031353	-6.6451	-0.0030819	463.78248709174954	38.993	0.65287	38.963	38.628	39.281	-0.03027	0.12972	-0.0013191	NaN	20.947	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100130	+		16411	30248	11159	11168							0.09122537696930522
IGRTPRRA	8	Unmodified	_IGRTPRRA_					0	0	0			REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	463.785767	925.556982	-1.1743	-0.0005446	-5.4983	-0.00255	-6.6726	-0.0030946	463.78311575459986	38.882	0.69342	38.835	38.465	39.159	-0.047005	0.0012718	-0.00014851	NaN	20.947	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82036	+		16412	30248	11159	11168							0.09122537696930522
IGRTPRRA	8	Unmodified	_IGRTPRRA_					0	0	0			REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	463.785767	925.556982	-1.8905	-0.00087677	-4.4877	-0.0020813	-6.3781	-0.0029581	463.78356567031057	38.76	0.65456	38.772	38.447	39.101	0.011173	-0.06174	0.00078894	NaN	20.947	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84639	+		16413	30248	11159	11168							0.09122537696930522
IGRTPRRA	8	Unmodified	_IGRTPRRA_					0	0	0			REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	463.785767	925.556982	-1.1471	-0.00053203	-4.9107	-0.0022775	-6.0578	-0.0028095	463.7833869194931	38.94	0.47404	38.951	38.724	39.198	0.010708	0.11739	0.00039654	NaN	20.947	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63579	+		16414	30248	11159	11168							0.09122537696930522
IGRYVLLAFLS	11	Unmodified	_IGRYVLLAFLS_					0	0	0		ENST00000527257.1_1_11:124967504-124971231:-|nuORF;ENSG00000150433|ENST00000682305|TMEM218	ENST00000527257.1_1_11:124967504-124971231:-|nuORF	ENST00000527257.1_1_11:124967504-124971231:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.2978515625	3	417.920174	1250.73869	-1.1731	-0.00049026	2.5975	0.0010855	1.4244	0.00059527	418.2551594522661	67.684	0.17752	67.743	67.605	67.783	0.059288					8	6	2	0	0	0	0.17375	1	6043	6043		30.569	3.5215	1	24268			16415	5064	11160	11169	18987	18987					0.12335412879338037
IGSKRLLIKYK	11	Unmodified	_IGSKRLLIKYK_					0	0	0		L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|24|1|sense	L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|24|1|sense	L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|24|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.29168701171875	3	440.29049	1317.84964	-0.12551	-5.5261E-05	4.425	0.0019483	4.2995	0.001893	440.29228151572136	58.121	1.3606	58.091	57.557	58.917	-0.029865					98	39	4	0	0	0	0.77205	2	5386	5386;5396		17.167	4.2093	1	263280			16416	14664	11161	11170	18988;18989	18988					0.20343052587395505
IGTSLRKPSLH	11	Unmodified	_IGTSLRKPSLH_					0	0	0			REV__ENSG00000177511|ENST00000324000|ST8SIA3	REV__ENSG00000177511|ENST00000324000|ST8SIA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.57489013671875	3	403.575178	1207.70371	1.058	0.00042698	-1.9376	-0.00078196	-0.87959	-0.00035498	403.5743201000087	79.412	0.85108	79.828	79.359	80.21	0.41621					61	19	4	0	0	0	0.70584	1	9129	9129		30.569	1.0181	1	1726100	+		16417	22214	11162	11171	18990	18990					0.10816170071370834
IGTSLRKPSLH	11	Unmodified	_IGTSLRKPSLH_					0	0	0			REV__ENSG00000177511|ENST00000324000|ST8SIA3	REV__ENSG00000177511|ENST00000324000|ST8SIA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5754089355469	3	403.575178	1207.70371	-0.34084	-0.00013755	-0.1497	-6.0414E-05	-0.49054	-0.00019797	403.5750005668677	84.271	3.0277	84.718	84.392	87.419	0.44736					131	74	3	0	0	0	0.71207	1	9830	9830		29.551	0	1	818700	+		16418	22214	11162	11171	18991	18991					0.10816170071370834
IGTVKCLAM	9	Unmodified	_IGTVKCLAM_					0	0	0		ENSG00000005249|ENST00000265717|PRKAR2B	ENSG00000005249|ENST00000265717|PRKAR2B	ENSG00000005249|ENST00000265717|PRKAR2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.25714111328125	2	468.256274	934.497995	-0.24701	-0.00011566	-2.829	-0.0013247	-3.076	-0.0014404	468.25479155810393	81.956	2.8945	82.014	80.909	83.803	0.057808					126	66	2	0	0	0	0.77546	1	8188	8188		31.955	0	1	193290			16419	680	11163	11172	18992	18992					0.028125572960789214
IGVELKQLEW	10	Unmodified	_IGVELKQLEW_					0	0	0			REV__ENSG00000164168|ENST00000296582|TMEM184C	REV__ENSG00000164168|ENST00000296582|TMEM184C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5638732910156	3	405.564168	1213.67067	-1.5858	-0.00064316	2.9135	0.0011816	1.3277	0.00053847	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.86718	1	5353	5353		20.03	2.8637	1	181560	+		16420	21043	11164	11173	18993	18993					0.07238543228640992
IGVLQGIR	8	Unmodified	_IGVLQGIR_					0	0	0			REV__nc|ENSG00000226807|Q6ZUA9|MROH5	REV__nc|ENSG00000226807|Q6ZUA9|MROH5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	427.3026428222656	2	428.27417	854.533787	-1.7011	-0.00072855	4.0347	0.0017279	2.3335	0.00099939	428.2762720124552	71.285	0.103	71.419	71.367	71.47	0.13356					6	3	2	0	0	0	0.4196	1	6487	6487		35.201	8.4046	1	34687	+		16421	30212	11165	11174	18994	18994					0.10070098859614518
IGVTSLNVHIR	11	Unmodified	_IGVTSLNVHIR_					0	0	0			REV__ENSG00000132518|ENST00000254854|GUCY2D	REV__ENSG00000132518|ENST00000254854|GUCY2D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5746765136719	3	403.575178	1207.70371	0.97828	0.00039481	-1.9734	-0.0007964	-0.99509	-0.00040159	403.5743581781147	80.189	0.84587	80.605	80.082	80.928	0.41621					61	19	4	0	0	0	0.60888	1	9188	9188		43.419	1.9919	1	3876600	+		16422	19009	11166	11175	18995	18995					0.10816170071370834
IGWGAATLGP	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))IGWGAATLGP_					1	0	0			REV__ENST00000225655.5_1_17:4849993-4850038:-|nuORF	REV__ENST00000225655.5_1_17:4849993-4850038:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.7589416503906	2	492.761092	983.507631	0.21633	0.0001066	-4.0605	-0.0020009	-3.8442	-0.0018943	492.75891451108805	18.952	0.47666	18.475	18.171	18.647	-0.47694					17	10	2	0	0	0	0.50394	1	451	451		55.504	18.345	1	129600	+		16423	24176	11167	11176	18996	18996					0.0152178489746575
IGYLITKKNVF	11	Unmodified	_IGYLITKKNVF_					0	0	0		ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.59771728515625	3	432.595579	1294.76491	2.718	0.0011758	2.0126	0.00087062	4.7305	0.0020464	432.59643721162763	106.42	1.1232	106.39	105.97	107.1	-0.036613					90	25	5	0	0	0	0.71207	3	11769	11756;11769;11804		29.551	4.1152	1	14662000			16424	7971	11168	11177	18997;18998;18999	18998					0.12931682050793825
IGYLITKKNVF	11	Unmodified	_IGYLITKKNVF_					0	0	0		ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3924560546875	2	648.389731	1294.76491	2.6473	0.0017165	1.9919	0.0012915	4.6393	0.0030081	648.3908884221966	106.46	0.85558	106.43	105.94	106.79	-0.034134					69	19	4	0	0	0	0.69071	1	11780	11780		30.318	3.6248	1	16306000			16425	7971	11168	11177	19000	19000					0.12931682050793825
IGYLITKKNVF	11	Unmodified	_IGYLITKKNVF_					0	0	0		ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5976257324219	3	432.595579	1294.76491	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.91	1	106.88	106.38	107.38	-0.034134								0	0	0	0.56276	1	11829	11829		19.263	0.73163	1				16426	7971	11168	11177	19001	19001					0.12931682050793825
IGYLITKKNVF	11	Unmodified	_IGYLITKKNVF_					0	0	0		ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5977478027344	3	432.595579	1294.76491	2.4047	0.0010403	2.3443	0.0010141	4.749	0.0020544	432.5965673542701	106.31	1.2824	106.34	105.87	107.15	0.03688					86	29	5	0	0	0	0.73621	2	11628	11628;11663		25.126	5.0955	1	16046000			16427	7971	11168	11177	19002;19003	19002					0.12931682050793825
IGYVIQLAR	9	Unmodified	_IGYVIQLAR_					0	0	0			REV__ENST00000490881.5_1_1:163291794-163297702:+|nuORF	REV__ENST00000490881.5_1_1:163291794-163297702:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.4561767578125	2	516.813659	1031.61277	0.92128	0.00047613	0.93519	0.00048332	1.8565	0.00095945	516.8141053500261	35.537	1.7614	35.785	35.053	36.815	0.24769					67	44	2	0	0	0	0.20789	1	2841	2841		23.042	0	1	171710	+		16428	15423	11169	11178	19004	19004					0.09822326093899392
IHAKLLAPEFV	11	Unmodified	_IHAKLLAPEFV_					0	0	0		nc|ENSG00000104047|Q8N5C7-2|DTWD1;ENSG00000104047|ENST00000403028|DTWD1	nc|ENSG00000104047|Q8N5C7-2|DTWD1	nc|ENSG00000104047|Q8N5C7-2|DTWD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.3728637695312	2	619.368798	1236.72304	1.9872	0.0012308	3.6389	0.0022538	5.6261	0.0034846	619.3705755303217	101.25	1.7847	101.55	101.13	102.91	0.2999					90	48	3	0	0	0	0.70737	1	12275	12275		30.318	1.1682	1	2252000			16429	2109	11170	11179	19005	19005					0.11415126362248884
IHCSLNIPG	9	Unmodified	_IHCSLNIPG_					0	0	0		nc|ENSG00000177800|Q5T7P6|TMEM78	nc|ENSG00000177800|Q5T7P6|TMEM78	nc|ENSG00000177800|Q5T7P6|TMEM78	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	477.7471923828125	2	477.247295	952.480036	-1.6314	-0.00077857	-0.049853	-2.3792E-05	-1.6812	-0.00080236	477.2470652541958	68.894	1.0877	68.927	68.291	69.379	0.032997					77	45	2	0	0	0	0.74721	1	6601	6601		37.159	0.71236	1	141340			16430	15119	11171	11180	19006	19006					0.0018955836559371164
IHCSLNIPG	9	Unmodified	_IHCSLNIPG_					0	0	0		nc|ENSG00000177800|Q5T7P6|TMEM78	nc|ENSG00000177800|Q5T7P6|TMEM78	nc|ENSG00000177800|Q5T7P6|TMEM78	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2467346191406	2	477.247295	952.480036	0.42784	0.00020419	-2.0067	-0.00095767	-1.5788	-0.00075348	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.51307	1	7033	7033		51.335	3.4199	1	2278400			16431	15119	11171	11180	19007	19007					0.0018955836559371164
IHCSLNIPG	9	Unmodified	_IHCSLNIPG_					0	0	0		nc|ENSG00000177800|Q5T7P6|TMEM78	nc|ENSG00000177800|Q5T7P6|TMEM78	nc|ENSG00000177800|Q5T7P6|TMEM78	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2466125488281	2	477.247295	952.480036	-0.88369	-0.00042174	-0.86186	-0.00041132	-1.7455	-0.00083306	477.24693641483543	64.828	2.6891	65.382	64.729	67.418	0.55386					152	75	5	0	0	0	0.51307	4	7010	6988;7010;7077;7102		51.335	10.763	1	2295100			16432	15119	11171	11180	19008;19009;19010;19011	19009					0.0018955836559371164
IHDGCLLW	8	Unmodified	_IHDGCLLW_					0	0	0		nc|ENSG00000116584|Q92974-3|ARHGEF2;nc|ENSG00000116584|Q92974-2|ARHGEF2;ENSG00000116584|ENST00000361247|ARHGEF2;ENST00000474428.6_1_1:155922555-155932010:-|nuORF	nc|ENSG00000116584|Q92974-3|ARHGEF2	nc|ENSG00000116584|Q92974-3|ARHGEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.7360534667969	2	478.736563	955.458573	-0.90023	-0.00043097	0.17821	8.5317E-05	-0.72201	-0.00034565	478.73679947267	78.748	1.2743	79.311	78.91	80.184	0.56332					63	29	3	0	0	0	0.87807	1	9047	9047		31.579	2.4293	1	1068100			16433	2928	11172	11181	19012	19012					-0.02093826663121945
IHDILYTIVQ	10	Unmodified	_IHDILYTIVQ_					0	0	0		nc|ENSG00000104093|Q8TDJ6-2|DMXL2;nc|ENSG00000104093|Q8TDJ6|DMXL2;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;ENSG00000104093|ENST00000560891|DMXL2	nc|ENSG00000104093|Q8TDJ6-2|DMXL2	nc|ENSG00000104093|Q8TDJ6-2|DMXL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.564697265625	3	405.564168	1213.67067	-1.5858	-0.00064316	2.9135	0.0011816	1.3277	0.00053847	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.86272	1	5296	5296		23.378	6.2112	1	181560			16434	2114	11173	11182	19013	19013					0.0723854322866373
IHDSLPPPEP	10	Unmodified	_IHDSLPPPEP_					0	0	0			REV__ENSG00000100191|ENST00000266086|SLC5A4	REV__ENSG00000100191|ENST00000266086|SLC5A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.7846069335938	2	551.282389	1100.55022	0.77804	0.00042892	2.4216	0.001335	3.1997	0.0017639	551.2835921377737	60.477	1.0057	60.445	59.982	60.987	-0.03223					48	28	2	0	0	0	0.71042	1	5740	5740		44.117	5.3107	1	132690	+		16435	17149	11174	11183	19014	19014					0.003971352350617963
IHERSGNREAQ	11	Unmodified	_IHERSGNREAQ_					0	0	0		nc|ENSG00000268447|Q16385-2|SSX2	nc|ENSG00000268447|Q16385-2|SSX2	nc|ENSG00000268447|Q16385-2|SSX2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	433.2555847167969	3	432.884963	1295.63306	-0.96167	-0.00041629	2.1061	0.0009117	1.1444	0.00049541	432.8859054189383	105.21	4.0137	105.21	103.72	107.73	0					161	95	2	0	0	0	0.1751	1	11137	11137		35.178	18.011	1	132590			16436	15309	11175	11184	19015	19015					-0.0029315498420601216
IHERSGNREAQ	11	Unmodified	_IHERSGNREAQ_					0	0	0		nc|ENSG00000268447|Q16385-2|SSX2	nc|ENSG00000268447|Q16385-2|SSX2	nc|ENSG00000268447|Q16385-2|SSX2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.2555236816406	3	432.884963	1295.63306	-1.8315	-0.00079282	1.3732	0.00059442	-0.45833	-0.0001984	433.2194309700712	107.4	0.57837	107.43	107.21	107.79	0.036118					21	13	2	0	0	0	0.17368	1	11462	11462		28.577	0	1	120720			16437	15309	11175	11184	19016	19016					-0.0029315498420601216
IHFLRKIGM	9	Unmodified	_IHFLRKIGM_					0	0	0		ENST00000484430.1_1_15:60060614-60060647:+|nuORF	ENST00000484430.1_1_15:60060614-60060647:+|nuORF	ENST00000484430.1_1_15:60060614-60060647:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.8301391601562	2	557.831329	1113.6481	1.3464	0.00075106	-2.3323	-0.001301	-0.98587	-0.00054995	557.8300995899048	100.89	1.6699	100.93	100.47	102.14	0.046356					80	39	3	0	0	0	0.7932	1	10826	10826		26.796	5.8492	1	658310			16438	12539	11176	11185	19017	19017					0.09582665350080788
IHFQLPKI	8	Unmodified	_IHFQLPKI_					0	0	0			REV__nc|ENSG00000151233|Q4G148-2|GXYLT1	REV__nc|ENSG00000151233|Q4G148-2|GXYLT1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.30511474609375	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.698	1	52.694	52.194	53.194	-0.0033035								0	0	0	0.30125	1	4571	4571		20.482	0	1		+		16439	20241	11177	11186	19018	19018					0.0988724492780193
IHGGFHSC	8	Unmodified	_IHGGFHSC_					0	0	0		ENSG00000166268|ENST00000552032|MYRFL	ENSG00000166268|ENST00000552032|MYRFL	ENSG00000166268|ENST00000552032|MYRFL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.23577880859375	2	429.18978	856.365007	0.92887	0.00039866	2.6932	0.0011559	3.6221	0.0015545	429.1921166885938	63.064	0.052673	63.092	63.063	63.116	0.02813					4	2	2	0	0	0	0.4196	1	5893	5893		19.36	7.1531	1	27406			16440	6174	11178	11187	19019	19019					-0.0689212604554541
IHGRKLKEIN	10	Unmodified	_IHGRKLKEIN_					0	0	0		nc|ENSG00000119596|P49750-3|YLPM1;nc|ENSG00000119596|P49750-1|YLPM1;ENSG00000119596|ENST00000325680|YLPM1	nc|ENSG00000119596|P49750-3|YLPM1	nc|ENSG00000119596|P49750-3|YLPM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.24688720703125	3	403.247173	1206.71969	-0.18602	-7.5014E-05	-0.48244	-0.00019454	-0.66847	-0.00026956	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.8651	1	11368	11368		30.569	10.538	1	12308000			16441	3076	11179	11188	19020	19020					0.12459876308275852
IHGRKLKEIN	10	Unmodified	_IHGRKLKEIN_					0	0	0		nc|ENSG00000119596|P49750-3|YLPM1;nc|ENSG00000119596|P49750-1|YLPM1;ENSG00000119596|ENST00000325680|YLPM1	nc|ENSG00000119596|P49750-3|YLPM1	nc|ENSG00000119596|P49750-3|YLPM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2469482421875	3	403.247173	1206.71969	0.73411	0.00029603	-1.4803	-0.00059692	-0.74617	-0.00030089	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.8505	2	11063	11063;11171		35.178	19.114	1	18617000			16442	3076	11179	11188	19021;19022	19021					0.12459876308275852
IHGRKLKEIN	10	Unmodified	_IHGRKLKEIN_					0	0	0		nc|ENSG00000119596|P49750-3|YLPM1;nc|ENSG00000119596|P49750-1|YLPM1;ENSG00000119596|ENST00000325680|YLPM1	nc|ENSG00000119596|P49750-3|YLPM1	nc|ENSG00000119596|P49750-3|YLPM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2469482421875	3	403.247173	1206.71969	-1.9293	-0.00077799	1.1746	0.00047366	-0.7547	-0.00030433	403.24758115209465	104.53	3.0767	104.62	103.79	106.87	0.093857					248	75	5	0	0	0	0.86272	2	11026	10980;11026		36.318	16.647	1	9819800			16443	3076	11179	11188	19023;19024	19024					0.12459876308275852
IHGVAPRN	8	Unmodified	_IHGVAPRN_					0	0	0		nc|ENSG00000008083|Q92833-2|JARID2;nc|ENSG00000008083|Q92833-3|JARID2;ENSG00000008083|ENST00000341776|JARID2	nc|ENSG00000008083|Q92833-2|JARID2	nc|ENSG00000008083|Q92833-2|JARID2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.246337890625	2	432.245944	862.477334	2.2492	0.0009722	0.66992	0.00028957	2.9191	0.0012618	432.24608940248754	98.153	1.1777	98.098	97.645	98.823	-0.054825					59	26	3	0	0	0	0.86791	1	10585	10585		28.254	0	1	400370			16444	733	11180	11189	19025	19025					0.04059471022935668
IHHARKTH	8	Unmodified	_IHHARKTH_					0	0	0		ENST00000392379.5_1_3:197238637-197238769:-|nuORF	ENST00000392379.5_1_3:197238637-197238769:-|nuORF	ENST00000392379.5_1_3:197238637-197238769:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.61163330078125	2	500.283392	998.552231	1.0321	0.00051632	-1.4695	-0.00073518	-0.43747	-0.00021886	500.28261243239	16.642	0.34256	16.72	16.609	16.951	0.07715					14	11	2	0	0	0	0.4196	1	110	110		15.642	4.7763	1	21753			16445	11019	11181	11190	19026	19026					0.05289653554166307
IHHGDLRKIHK	11	Unmodified	_IHHGDLRKIHK_					0	0	0		nc|ENSG00000163046|A7E2S9-2|ANKRD30BL;ENSG00000163046|ENST00000409867|ANKRD30BL	nc|ENSG00000163046|A7E2S9-2|ANKRD30BL	nc|ENSG00000163046|A7E2S9-2|ANKRD30BL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.93212890625	3	451.933588	1352.77894	-1.018	-0.00046007	-0.95961	-0.00043368	-1.9776	-0.00089375	451.9330395027802	99.241	2.1396	99.241	98.063	100.2	0					134	52	3	0	0	0	0.71803	1	10015	10015		28.577	6.7963	1	190490			16446	5759	11182	11191	19027	19027					0.11665772322453449
IHHIAKVSK	9	Unmodified	_IHHIAKVSK_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|178|3|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|178|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.8150024414062	2	516.819276	1031.624	0.13072	6.756E-05	-0.23786	-0.00012293	-0.10714	-5.5372E-05	516.819028263052	19.635	0.59604	19.006	18.801	19.397	-0.6296					28	12	3	0	0	0	0.7932	1	569	569		23.042	1.0826	1	276630	+		16447	29596	11183	11192	19028	19028					0.10945148188034182
IHHKGGKA	8	Unmodified	_IHHKGGKA_					0	0	0		nc|ENSG00000124233|P04279-2|SEMG1;ENSG00000124233|ENST00000372781|SEMG1	nc|ENSG00000124233|P04279-2|SEMG1	nc|ENSG00000124233|P04279-2|SEMG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.25042724609375	2	424.248486	846.48242	2.211	0.00093801	1.891	0.00080225	4.102	0.0017403	424.249377193164	107.05	1.1854	107.15	106.72	107.9	0.10396					163	44	6	0	0	0	0.88915	1	13034	13034		35.201	3.2459	1	22757000			16448	3324	11184	11193	19029	19029					0.05303774885567236
IHHKLVLP	8	Unmodified	_IHHKLVLP_					0	0	0		ENST00000533085.2_1_12:89894792-89896268:+|nuORF;ENST00000510189.5_1_4:68359569-68411187:-|nuORF;ENSG00000145241|ENST00000273853|CENPC	ENST00000533085.2_1_12:89894792-89896268:+|nuORF	ENST00000533085.2_1_12:89894792-89896268:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.80419921875	2	478.805637	955.596721	-2.669	-0.0012779	3.4642	0.0016587	0.7952	0.00038075	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.87276	2	2716	2662;2716		37.028	9.3597	1	370420			16449	4756	11185	11194	19030;19031	19031					0.11714664647661266
IHHKLVLP	8	Unmodified	_IHHKLVLP_					0	0	0		ENST00000533085.2_1_12:89894792-89896268:+|nuORF;ENST00000510189.5_1_4:68359569-68411187:-|nuORF;ENSG00000145241|ENST00000273853|CENPC	ENST00000533085.2_1_12:89894792-89896268:+|nuORF	ENST00000533085.2_1_12:89894792-89896268:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8056335449219	2	478.805637	955.596721	-0.92452	-0.00044266	2.2693	0.0010865	1.3448	0.00064388	478.80664804898805	39.433	1.9403	39.444	38.3	40.24	0.010708					89	52	2	0	0	0	0.80706	1	2485	2485		19.36	2.8868	1	287670			16450	4756	11185	11194	19032	19032					0.11714664647661266
IHIFWIRTPQ	10	Unmodified	_IHIFWIRTPQ_					0	0	0		ENST00000398117.1_1_18:60795005-60795071:-|nuORF	ENST00000398117.1_1_18:60795005-60795071:-|nuORF	ENST00000398117.1_1_18:60795005-60795071:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2633361816406	3	437.583785	1309.72953	0.24604	0.00010766	-1.2621	-0.00055226	-1.016	-0.0004446	437.5831464415382	41.743	0.53058	41.712	41.502	42.032	-0.030987					23	12	2	0	0	0	0.37624	1	3085	3085		30.569	1.0181	1	103120			16451	11174	11186	11195	19033	19033					0.08705064313653565
IHIYRQGFF	9	Unmodified	_IHIYRQGFF_					0	0	0			REV__ENSG00000117115|ENST00000375486|PADI2	REV__ENSG00000117115|ENST00000375486|PADI2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8156127929688	2	590.816733	1179.61891	0.32023	0.0001892	-4.4136	-0.0026076	-4.0934	-0.0024184	590.8140096130788	30.16	0.57468	30.117	29.776	30.35	-0.043093					19	12	2	0	0	0	0.7932	1	1641	1641		19.36	0.25645	1	31894	+		16452	18245	11187	11196	19034	19034					0.03628844325407954
IHKIIFGAIRD	11	Unmodified	_IHKIIFGAIRD_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.882080078125	2	641.885147	1281.75574	-1.1528	-0.00073997	-3.087	-0.0019815	-4.2398	-0.0027215	641.8829970841505	95.709	2.5048	95.911	94.329	96.834	0.20242					216	59	5	0	0	0	0.72918	1	9840	9840		26.693	1.1189	1	1922900	+		16453	23025	11188	11197	19035	19035					0.12613333485114708
IHKIIFGAIRD	11	Unmodified	_IHKIIFGAIRD_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8834228515625	2	641.885147	1281.75574	-1.1529	-0.00074004	-3.1	-0.0019899	-4.2529	-0.0027299	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.6921	1	10425	10425		32.812	2.4947	1	3521600	+		16454	23025	11188	11197	19036	19036					0.12613333485114708
IHKIVRKP	8	Unmodified	_IHKIVRKP_					0	0	0		nc|ENSG00000162711|Q96P20-3|NLRP3;ENST00000474792.1_1_1:247582090-247588902:+|nuORF;nc|ENSG00000162711|Q96P20-2|NLRP3;nc|ENSG00000162711|Q96P20-5|NLRP3;nc|ENSG00000162711|Q96P20-4|NLRP3;nc|ENSG00000162711|Q96P20-6|NLRP3;ENSG00000162711|ENST00000336119|NLRP3;nc|ENSG00000162711|Q96P20|NLRP3	nc|ENSG00000162711|Q96P20-3|NLRP3	nc|ENSG00000162711|Q96P20-3|NLRP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.8381042480469	2	495.832186	989.649819	0.22087	0.00010952	4.1686	0.0020669	4.3895	0.0021765	495.83424949571145	39.993	1.2825	39.962	39.281	40.563	-0.030514					47	32	2	0	0	0	0.81548	1	2770	2770		20.482	5.8177	1	101230			16455	5723	11189	11198	19037	19037					0.15458042430316254
IHKIVRKP	8	Unmodified	_IHKIVRKP_					0	0	0		nc|ENSG00000162711|Q96P20-3|NLRP3;ENST00000474792.1_1_1:247582090-247588902:+|nuORF;nc|ENSG00000162711|Q96P20-2|NLRP3;nc|ENSG00000162711|Q96P20-5|NLRP3;nc|ENSG00000162711|Q96P20-4|NLRP3;nc|ENSG00000162711|Q96P20-6|NLRP3;ENSG00000162711|ENST00000336119|NLRP3;nc|ENSG00000162711|Q96P20|NLRP3	nc|ENSG00000162711|Q96P20-3|NLRP3	nc|ENSG00000162711|Q96P20-3|NLRP3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	495.832186	989.649819	-1.868	-0.0009262	6.2661	0.003107	4.3982	0.0021808	495.83514180886766	39.932	0.95768	40.3	39.514	40.472	0.36797	0.16859	0.0012535	NaN	20.482	32	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76359			16456	5723	11189	11198							0.15458042430316254
IHKKKYFD	8	Unmodified	_IHKKKYFD_					0	0	0		nc|ENSG00000143033|Q9Y483-3|MTF2;ENSG00000143033|ENST00000370298|MTF2;nc|ENSG00000143033|Q9Y483-4|MTF2	nc|ENSG00000143033|Q9Y483-3|MTF2	nc|ENSG00000143033|Q9Y483-3|MTF2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.3973999023438	2	539.805834	1077.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.38	1	114.31	113.81	114.81	-0.07								0	0	0	0.29631	1	12373	12373		25.45	0	1				16457	4596	11190	11199	19038	19038					0.06142039576843672
IHKRLTNKIE	10	Unmodified	_IHKRLTNKIE_					0	0	0			REV__ENSG00000133302|ENST00000265140|SLF1	REV__ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.9223327636719	3	417.922578	1250.7459	0.73411	0.0003068	-1.4619	-0.00061096	-0.7278	-0.00030416	417.9219647760214	105.64	2.8346	105.75	104.94	107.78	0.10766					247	69	5	0	0	0	0.8651	1	11390	11390		24.232	0.85391	1	29053000	+		16458	19070	11191	11200	19039	19039					0.13056145479754377
IHLAAWSGS	9	Unmodified	_IHLAAWSGS_					0	0	0		ENSG00000189045|ENST00000601380|ANKDD1B	ENSG00000189045|ENST00000601380|ANKDD1B	ENSG00000189045|ENST00000601380|ANKDD1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.2424621582031	2	471.245609	940.476666	-0.11027	-5.1965E-05	-3.7858	-0.0017841	-3.8961	-0.001836	471.2436552903768	85.85	3.7163	85.917	84.593	88.309	0.067261					181	85	3	0	0	0	0.76996	1	8617	8617		33.516	1.5607	1	223720			16459	7983	11192	11201	19040	19040					0.00404631583239734
IHLLGLRVDW	10	Unmodified	_IHLLGLRVDW_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.354248046875	2	611.358765	1220.70298	-0.22744	-0.00013904	-3.4196	-0.0020906	-3.6471	-0.0022297	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.86718	1	9618	9618		27.882	1.1893	1	8715400			16460	5794	11193	11202	19041	19041					0.10145375422325742
IHLLKLSH	8	Unmodified	_IHLLKLSH_					0	0	0			REV__ENST00000533134.1_1_11:120924418-120928239:+|nuORF	REV__ENST00000533134.1_1_11:120924418-120928239:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.80072021484375	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.88915	1	9621	9621		35.201	1.6851	1	7439400	+		16461	20367	11194	11203	19042	19042					0.1102236078503438
IHLLMLRLI	9	Unmodified	_IHLLMLRLI_					0	0	0			REV__ENSG00000204310|ENST00000375107|AGPAT1	REV__ENSG00000204310|ENST00000375107|AGPAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.3644409179688	2	561.365004	1120.71546	-0.90534	-0.00050823	-1.2125	-0.00068064	-2.1178	-0.0011889	561.3641911256115	45.987	0.8561	45.968	45.577	46.433	-0.018581					49	20	3	0	0	0	0.7932	1	3632	3632		25.45	4.9683	1	139730	+		16462	15879	11195	11204	19043	19043					0.15992695560998982
IHLTPANII	9	Unmodified	_IHLTPANII_					0	0	0			REV__nc|ENSG00000133460|Q9BYW1|SLC2A11;REV__nc|ENSG00000133460|Q9BYW1-2|SLC2A11	REV__nc|ENSG00000133460|Q9BYW1|SLC2A11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.3016052246094	2	496.300384	990.586216	-0.1906	-9.4597E-05	0.14517	7.2049E-05	-0.045433	-2.2548E-05	496.30026686092117	32.285	0.48824	32.231	31.869	32.357	-0.054337					16	10	2	0	0	0	0.7932	1	1893	1893		26.796	5.0938	1	28209	+		16463	19080;26288	11196	11205	19044	19044					0.0905463720255284
IHLVEVDTQG	10	Unmodified	_IHLVEVDTQG_					0	0	0		ENSG00000157353|ENST00000288078|FCSK;nc|ENSG00000157353|Q8N0W3-2|FCSK	ENSG00000157353|ENST00000288078|FCSK	ENSG00000157353|ENST00000288078|FCSK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.793212890625	2	555.793121	1109.57169	0.20741	0.00011528	-0.74282	-0.00041286	-0.53541	-0.00029758	555.7925914671927	27.455	0.75734	27.416	27.075	27.832	-0.038523					30	17	2	0	0	0	0.8608	1	1331	1331		34.173	1.3601	1	58602			16464	5423	11197	11206	19045	19045					0.021285202637500333
IHMEFTNIL	9	Unmodified	_IHMEFTNIL_					0	0	0		ENSG00000137573|ENST00000402687|SULF1;ENST00000521946.5_1_8:70505207-70554528:+|nuORF	ENSG00000137573|ENST00000402687|SULF1	ENSG00000137573|ENST00000402687|SULF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.2907104492188	2	559.289159	1116.56377	0.71868	0.00040195	1.6539	0.00092501	2.3726	0.001327	559.2899645855562	77.204	0.99672	77.609	77.226	78.222	0.40488					70	25	4	0	0	0	0.25483	1	8769	8769		68.787	0.16104	1	3911800			16465	4214	11198	11207	19046	19046					0.010146697426307583
IHMYLYLY	8	Unmodified	_IHMYLYLY_					0	0	0			REV__ENST00000609796.1_1_20:1460117-1472086:-|nuORF	REV__ENST00000609796.1_1_20:1460117-1472086:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	558.2848510742188	2	558.283346	1114.55214	0.31862	0.00017788	1.9111	0.0010669	2.2297	0.0012448	558.2843533190427	75.228	0.55041	75.353	75.091	75.641	0.12545					32	13	3	0	0	0	0.88393	1	6995	6995		33.493	4.3229	1	206500	+		16466	29420	11199	11208	19047	19047					-0.0005552728071052115
IHNKLPVRQ	9	Unmodified	_IHNKLPVRQ_					0	0	0		ENST00000521713.1_1_7:6179681-6199085:+|nuORF;ENSG00000106346|ENST00000306177|USP42;nc|ENSG00000106346|Q9H9J4|USP42;ENST00000479544.6_1_7:6150764-6196715:+|nuORF	ENST00000521713.1_1_7:6179681-6199085:+|nuORF	ENST00000521713.1_1_7:6179681-6199085:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3370361328125	2	552.835457	1103.65636	-0.74602	-0.00041243	-1.6881	-0.00093326	-2.4342	-0.0013457	552.8344221073519	82.073	1.2669	82.073	81.549	82.816	0					61	32	2	0	0	0	0.78536	1	7701	7701		29.15	4.9468	1	174970			16467	2291	11200	11209	19048	19048					0.10867935591022615
IHPCSDGP	8	Unmodified	_IHPCSDGP_					0	0	0			REV__ENST00000562513.6_1_16:67862078-67865741:-|nuORF	REV__ENST00000562513.6_1_16:67862078-67865741:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1842041015625	2	413.18162	824.348688	2.3001	0.00095037	1.4681	0.00060658	3.7682	0.0015569	413.18257983004736	99.112	0.94866	99.474	99.096	100.04	0.36137					76	23	5	0	0	0	0.87276	1	11957	11957		29.842	1.5873	1	10767000	+		16468	28800	11201	11210	19049	19049					-0.07051252002304409
IHPDDSVK	8	Unmodified	_IHPDDSVK_					0	0	0		ENST00000471789.1_1_9:123594085-123605145:-|nuORF;nc|ENSG00000095261|Q16401-2|PSMD5;ENSG00000095261|ENST00000210313|PSMD5	ENST00000471789.1_1_9:123594085-123605145:-|nuORF	ENST00000471789.1_1_9:123594085-123605145:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.73529052734375	2	455.735074	909.455596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.962	1	31.956	31.456	32.456	-0.0061455								0	0	0	0.29498	1	1783	1783		26.796	0.10319	1				16469	1719	11202	11211	19050	19050					-0.0027537851627812415
IHPLIIIDST	10	Unmodified	_IHPLIIIDST_					0	0	0			REV__nc|ENSG00000148842|Q9H8M5-3|CNNM2	REV__nc|ENSG00000148842|Q9H8M5-3|CNNM2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.3333740234375	2	561.331882	1120.64921	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.567	1	31.625	31.125	32.125	0.058315								0	0	0	0.45132	1	1443	1443		23.042	2.0956	1		+		16470	20141	11203	11212	19051	19051					0.09371158199951424
IHPRFLVALI	10	Unmodified	_IHPRFLVALI_					0	0	0		nc|ENSG00000198825|Q9Y2H2-2|INPP5F;ENSG00000198825|ENST00000650623|INPP5F	nc|ENSG00000198825|Q9Y2H2-2|INPP5F	nc|ENSG00000198825|Q9Y2H2-2|INPP5F	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3429565429688	2	589.874051	1177.73355	-1.3223	-0.00077997	1.1712	0.00069088	-0.15104	-8.9092E-05	590.3754864606357	94.652	0.33551	94.854	94.65	94.986	0.20242					10	7	2	0	0	0	0.37624	1	9602	9602		12.207	5.0135	1	39187			16471	8344	11204	11213	19052	19052					0.15179153807366674
IHQPRSEL	8	Unmodified	_IHQPRSEL_					0	0	0		ENSG00000138075|ENST00000405322|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.26629638671875	2	490.269616	978.524678	0.64646	0.00031694	-3.2661	-0.0016013	-2.6197	-0.0012843	490.26800757881944	83.964	3.3049	84.112	83.013	86.318	0.14793					138	76	2	0	0	0	0.87064	1	8218	8218		29.15	2.3535	1	246750			16472	4264	11205	11214	19053	19053					0.03455705503279205
IHRFWYNYRQR	11	Unmodified	_IHRFWYNYRQR_					0	0	0		nc|ENSG00000171509|Q9HBX9-5|RXFP1;nc|ENSG00000171509|Q9HBX9-2|RXFP1;ENSG00000171509|ENST00000307765|RXFP1;nc|ENSG00000171509|Q9HBX9-4|RXFP1	nc|ENSG00000171509|Q9HBX9-5|RXFP1	nc|ENSG00000171509|Q9HBX9-5|RXFP1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8399047851562	3	546.951531	1637.83276	-0.49875	-0.00027279	2.9429	0.0016097	2.4442	0.0013369	547.2875781946007	101.19	0.12243	101.19	101.12	101.24	0					4	2	2	0	0	0	0.181	1	10287	10287		9.2118	5.8031	1	60194			16473	6677	11206	11215	19054	19054					0.0393594475417558
IHRGPEAR	8	Unmodified	_IHRGPEAR_					0	0	0		ENST00000451174.1_3_14:45719285-45722361:-|nuORF;ENST00000310806.8_1_14:45716533-45722412:-|nuORF	ENST00000451174.1_3_14:45719285-45722361:-|nuORF	ENST00000451174.1_3_14:45719285-45722361:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7147521972656	2	468.262125	934.509697	-0.49218	-0.00023047	3.5505	0.0016626	3.0583	0.0014321	468.2637227563381	79.399	0.51227	79.949	79.701	80.213	0.54945					19	11	2	0	0	0	0.4196	1	9134	9134		23.042	0	1	229740			16474	9911	11207	11216	19055	19055					0.0398225842593547
IHRGPEAR	8	Unmodified	_IHRGPEAR_					0	0	0		ENST00000451174.1_3_14:45719285-45722361:-|nuORF;ENST00000310806.8_1_14:45716533-45722412:-|nuORF	ENST00000451174.1_3_14:45719285-45722361:-|nuORF	ENST00000451174.1_3_14:45719285-45722361:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	468.262125	934.509697	-0.39708	-0.00018594	3.3007	0.0015456	2.9036	0.0013596	468.2636671429701	79.494	0.46815	79.91	79.699	80.168	0.41621	-0.019263	-0.00015991	NaN	10.866	20	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	237700			16475	9911	11207	11216							0.0398225842593547
IHRHLSIR	8	Unmodified	_IHRHLSIR_					0	0	0			REV__ENSG00000257594|ENST00000529983|GALNT4	REV__ENSG00000257594|ENST00000529983|GALNT4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3147583007812	2	516.314692	1030.61483	-0.63969	-0.00033028	-0.442	-0.00022821	-1.0817	-0.0005585	516.3144152653146	102.55	1.0925	102.55	101.98	103.08	0					67	27	3	0	0	0	0.87479	1	10503	10503		30.504	2.6214	1	640710	+		16476	23922	11208	11217	19056	19056					0.10074799622361752
IHRKAVPGNL	10	Unmodified	_IHRKAVPGNL_					0	0	0		ENSG00000183054|ENST00000329516|RGPD6;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000015568|ENST00000016946|RGPD5;nc|ENSG00000183054|Q99666-2|RGPD5	ENSG00000183054|ENST00000329516|RGPD6	ENSG00000183054|ENST00000329516|RGPD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3356323242188	2	552.835457	1103.65636	-1.2189	-0.00067387	-1.6175	-0.0008942	-2.8364	-0.0015681	552.8346542686365	81.546	0.98321	81.661	81.242	82.225	0.11426					37	22	2	0	0	0	0.86763	1	7767	7767		26.693	4.733	1	118780			16477	825	11209	11218	19057	19057					0.10867935591022615
IHRKLTPK	8	Unmodified	_IHRKLTPK_					0	0	0			REV__nc|ENSG00000125388|P32298-3|GRK4	REV__nc|ENSG00000125388|P32298-3|GRK4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	496.82244873046875	2	496.821818	991.629084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.463	1	15.38	14.88	15.88	-0.083363								0	0	0	0.29755	1	44	44		24.203	5.8783	1		+		16478	18641	11210	11219	19058	19058					0.13293452050641008
IHRKVKIIL	9	Unmodified	_IHRKVKIIL_					0	0	0		ENSG00000006634|ENST00000265728|DBF4	ENSG00000006634|ENST00000265728|DBF4	ENSG00000006634|ENST00000265728|DBF4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3402709960938	2	560.389868	1118.76518	0.86137	0.0004827	0.63072	0.00035345	1.4921	0.00083615	560.3901871859055	102.63	0.29121	102.76	102.6	102.89	0.12622					8	6	2	0	0	0	0.20789	1	10798	10798		7.6903	0.49693	1	53092			16479	706	11211	11220	19059	19059					0.21055146561320726
IHRRSKRI	8	Unmodified	_IHRRSKRI_					0	0	0			REV__ENSG00000115602|ENST00000233954|IL1RL1	REV__ENSG00000115602|ENST00000233954|IL1RL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.3402099609375	2	533.341241	1064.66793	1.2441	0.00066355	-3.2061	-0.00171	-1.962	-0.0010464	533.3394000177375	99.114	2.7086	99.162	98.677	101.39	0.047531					171	63	4	0	0	0	0.81548	1	10667	10667		20.482	1.1219	1	3009900	+		16480	18135	11212	11221	19060	19060					0.1381817740502811
IHSDLHAY	8	Unmodified	_IHSDLHAY_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.2352294921875	2	478.235242	954.45593	-1.6933	-0.00080982	0.26667	0.00012753	-1.4267	-0.00068228	478.23521025919547	44.024	0.58456	44.024	43.744	44.329	0					32	13	3	0	0	0	0.45589	1	3157	3157		77.944	3.4272	1	186720			16481	2816	11213	11222	19061	19061					-0.023119587964401944
IHSIHVSTPV	10	Unmodified	_IHSIHVSTPV_					0	0	0			REV__nc|ENSG00000038427|P13611-5|VCAN	REV__nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.29638671875	2	545.306198	1088.59784	0.09739	5.3107E-05	-0.15683	-8.5521E-05	-0.059441	-3.2413E-05	545.3060338932492	60.05	0.61361	60.144	59.8	60.414	0.094063					27	19	2	0	0	0	0.71042	1	5186	5186		44.117	9.9443	1	133080	+		16482	16305	11214	11223	19062	19062					0.057088342259021374
IHSKLMQNILA	11	Oxidation (M)	_IHSKLM(Oxidation (M))QNILA_		IHSKLM(1)QNILA		IHSKLM(46)QNILA	0	0	1			REV__ENST00000242810.10_1_3:183361295-183368126:+|nuORF	REV__ENST00000242810.10_1_3:183361295-183368126:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.3632202148438	2	642.360647	1282.70674	0.9424	0.00060536	1.57	0.0010085	2.5124	0.0016139	642.3625500461095	111.89	0.67577	111.96	111.47	112.15	0.069542					73	20	4	0	0	0	0.58425	1	12059	12059		45.972	6.7194	1	15356000	+		16483	24233	11215	11224	19063	19063		378			0.07669677133890218
IHSKLMQNILA	11	Oxidation (M)	_IHSKLM(Oxidation (M))QNILA_					0	0	1			REV__ENST00000242810.10_1_3:183361295-183368126:+|nuORF	REV__ENST00000242810.10_1_3:183361295-183368126:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	642.360647	1282.70674	1.6045	0.0010306	0.84075	0.00054006	2.4452	0.0015707	642.3620539591025	111.67	0.61607	111.78	111.48	112.09	0.11118	-0.15162	-2.0069E-05	NaN	45.972	58	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59513000	+		16484	24233	11215	11224				378			0.07669677133890218
IHSLINVLQ	9	Unmodified	_IHSLINVLQ_					0	0	0			REV__nc|ENSG00000126775|Q6ZNE5-2|ATG14	REV__nc|ENSG00000126775|Q6ZNE5-2|ATG14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.81005859375	2	518.811116	1035.60768	2.8674	0.0014877	-4.3223	-0.0022425	-1.4549	-0.00075482	518.8087133842567	102.43	0.63333	102.73	102.35	102.98	0.29865					39	14	3	0	0	0	0.55097	1	12480	12480		49.442	2.9848	1	1844600	+		16485	18712	11216	11225	19064	19064					0.09130022231283874
IHSLSSKRPKL	11	Unmodified	_IHSLSSKRPKL_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5932922363281	3	422.594461	1264.76155	-0.12961	-5.4774E-05	-3.0685	-0.0012967	-3.1981	-0.0013515	422.59301325163335	54.438	1.5298	54.43	53.553	55.082	-0.0077057					142	48	4	0	0	0	0.78391	1	4857	4857		14.694	0	1	1173800	+		16486	22085	11217	11226	19065	19065					0.13976431996798055
IHSSKQIICS	10	Unmodified	_IHSSKQIICS_					0	0	0			REV__ENSG00000150051|ENST00000419761|MKX	REV__ENSG00000150051|ENST00000419761|MKX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	558.2953491210938	2	558.297516	1114.58048	0.18963	0.00010587	-3.7106	-0.0020716	-3.521	-0.0019657	558.2953386853397	42.643	0.5373	42.597	42.291	42.829	-0.045467					24	15	2	0	0	0	0.64457	1	2882	2882		47.657	1.6851	1	224570	+		16487	15472	11218	11227	19066	19066					0.027771706286102926
IHTLFAKHIK	10	Unmodified	_IHTLFAKHIK_					0	0	0		nc|ENSG00000140995|Q6ZN54-4|DEF8;nc|ENSG00000140995|Q6ZN54-6|DEF8;nc|ENSG00000140995|Q6ZN54-3|DEF8;ENSG00000140995|ENST00000563594|DEF8;nc|ENSG00000140995|Q6ZN54|DEF8;ENST00000563805.1_1_16:90028494-90030760:+|nuORF	nc|ENSG00000140995|Q6ZN54-4|DEF8	nc|ENSG00000140995|Q6ZN54-4|DEF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.364501953125	2	604.369133	1206.72371	-1.2751	-0.00077064	-2.39	-0.0014444	-3.6651	-0.0022151	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85939	1	12565	12565		23.042	0	1	3346600			16488	4473	11219	11228	19067	19067					0.12861965801971564
IHTLLPWQCT	10	Unmodified	_IHTLLPWQCT_					0	0	0		ENSG00000123496|ENST00000243213|IL13RA2	ENSG00000123496|ENST00000243213|IL13RA2	ENSG00000123496|ENST00000243213|IL13RA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	606.3172607421875	2	606.315709	1210.61686	0.046398	2.8132E-05	2.1379	0.0012962	2.1843	0.0013244	606.3168793445461	27.969	0.88367	28.005	27.696	28.579	0.03607					67	30	3	0	0	0	0.33399	1	1309	1309		69.628	0	1	227170			16489	3277	11220	11229	19068	19068					0.019980475252850738
IHVQWGKSPFL	11	Unmodified	_IHVQWGKSPFL_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2450866699219	3	437.91179	1310.71354	-2.1644	-0.00094781	-3.094	-0.0013549	-5.2584	-0.0023027	437.9104110251152	17.522	0.33542	17.522	17.326	17.662	0					28	14	3	0	0	0	0.74022	1	220	220		24.232	2.5461	1	65289	+		16490	17093	11221	11230	19069	19069					0.07061358076748547
IHVSTIVSK	9	Unmodified	_IHVSTIVSK_					0	0	0			REV__ENSG00000150893|ENST00000280481|FREM2	REV__ENSG00000150893|ENST00000280481|FREM2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.29937744140625	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.259	1	72.302	71.802	72.802	0.042114								0	0	0	0.32469	1	6946	6946		21.96	1.9631	1		+		16491	20223	11222	11231	19070	19070					0.08914333339953373
IHWELLGKVL	10	Unmodified	_IHWELLGKVL_					0	0	0		ENST00000543693.5_1_9:14088242-14102451:-|nuORF	ENST00000543693.5_1_9:14088242-14102451:-|nuORF	ENST00000543693.5_1_9:14088242-14102451:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3660888671875	2	604.363516	1206.71248	3.2045	0.0019367	1.6316	0.00098609	4.8361	0.0029228	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.86698	1	11594	11594		16.473	0	1	63446000			16492	13558	11223	11232	19071	19071					0.11739143707859512
IHWKGVINDPV	11	Unmodified	_IHWKGVINDPV_					0	0	0		ENST00000432519.5_1_3:16358077-16358155:-|nuORF	ENST00000432519.5_1_3:16358077-16358155:-|nuORF	ENST00000432519.5_1_3:16358077-16358155:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3585815429688	2	639.35368	1276.69281	3.0904	0.0019759	-2.7729	-0.0017729	0.31748	0.00020298	640.3567163045125	99.066	2.3862	99.429	98.727	101.11	0.36292					195	59	5	0	0	0	0.61369	1	12046	12046		42.864	1.4377	1	1604000			16493	11669	11224	11233	19072	19072					0.06552767697098716
IHWQIISVWCI	11	Unmodified	_IHWQIISVWCI_					0	0	0		ENST00000592790.1_1_17:57919097-57919235:+|nuORF	ENST00000592790.1_1_17:57919097-57919235:+|nuORF	ENST00000592790.1_1_17:57919097-57919235:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.5392150878906	3	466.584797	1396.73256	-0.19972	-9.3188E-05	-1.8373	-0.00085725	-2.037	-0.00095044	466.91655196841634	30.727	0.17342	30.731	30.623	30.796	0.0037212					5	3	2	0	0	0	0.17294	1	2041	2041		25.126	3.4402	1	26695			16494	14295	11225	11234	19073	19073					0.050065713761568986
IIAAGGLLLA	10	Unmodified	_IIAAGGLLLA_					0	0	0			REV__ENSG00000147027|ENST00000275954|TMEM47	REV__ENSG00000147027|ENST00000275954|TMEM47	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.2987976074219	2	456.299853	910.585153	-0.85173	-0.00038864	0.76704	0.00035	-0.084692	-3.8645E-05	456.30009221877316	52.472	1.4857	52.896	52.517	54.003	0.42348					62	35	3	0	0	0	0.51323	1	5233	5233		54.765	8.8127	1	2903100	+		16495	20046	11226	11235	19074	19074					0.1262842283366581
IIAFVLEGK	9	Unmodified	_IIAFVLEGK_					0	0	0		nc|ENSG00000152291|O43493-6|TGOLN2;nc|ENSG00000152291|O43493-4|TGOLN2;ENSG00000152291|ENST00000377386|TGOLN2;nc|ENSG00000152291|O43493-5|TGOLN2;nc|ENSG00000152291|O43493-3|TGOLN2;nc|ENSG00000152291|O43493-7|TGOLN2	nc|ENSG00000152291|O43493-6|TGOLN2	nc|ENSG00000152291|O43493-6|TGOLN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.303955078125	2	495.305136	988.595718	-0.086106	-4.2649E-05	0.23222	0.00011502	0.14611	7.2369E-05	495.3050753476904	64.584	1.0101	65.138	64.685	65.695	0.55386					41	24	2	0	0	0	0.41984	2	7006	7006;7018		56.434	11.903	1	313980			16496	5167	11227	11236	19075;19076	19075					0.10096405488081928
IIAGQIERIRP	11	Unmodified	_IIAGQIERIRP_					0	0	0			REV__ENST00000496331.1_1_20:4854564-4866632:-|nuORF	REV__ENST00000496331.1_1_20:4854564-4866632:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5924072265625	3	422.594461	1264.76155	-1.7406	-0.00073557	-2.5077	-0.0010597	-4.2483	-0.0017953	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.77205	1	3855	3855		17.167	5.2344	1	1126900	+		16497	16958	11228	11237	19077	19077					0.13976431996798055
IIAHIQKGF	9	Unmodified	_IIAHIQKGF_					0	0	0		ENST00000492039.6_1_2:68374697-68384644:-|nuORF;ENST00000468984.1_1_2:68384284-68384644:-|nuORF;nc|ENSG00000243667|Q96MX6-2|DNAAF10;ENSG00000243667|ENST00000295121|DNAAF10	ENST00000492039.6_1_2:68374697-68384644:-|nuORF	ENST00000492039.6_1_2:68374697-68384644:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.3102416992188	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.77546	1	4079	4079		31.955	2.1133	1	1550000			16498	8811	11229	11238	19078	19078					0.09042343439477918
IIAIPTGVK	9	Unmodified	_IIAIPTGVK_					0	0	0		ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.29986572265625	2	456.299853	910.585153	-0.85173	-0.00038864	0.76704	0.00035	-0.084692	-3.8645E-05	456.30009221877316	52.472	1.4857	52.896	52.517	54.003	0.42348					62	35	3	0	0	0	0.30689	1	5267	5267		64.207	3.2353	1	2903100			16499	8340	11230	11239	19079	19079					0.1262842283366581
IIAIPTGVK	9	Unmodified	_IIAIPTGVK_					0	0	0		ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.3001403808594	2	456.299853	910.585153	0.074499	3.3994E-05	-0.15018	-6.8526E-05	-0.075679	-3.4532E-05	456.2996643113994	52.244	1.0704	52.912	52.596	53.667	0.6673					60	25	4	0	0	0	0.12652	3	5251	5251;5263;5276		87.754	21.857	1	3592600			16500	8340	11230	11239	19080;19081;19082	19080					0.1262842283366581
IIAIPTGVK	9	Unmodified	_IIAIPTGVK_					0	0	0		ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	456.299853	910.585153	-0.056857	-2.5944E-05	2.1113	0.0009634	2.0545	0.00093746	456.30072425015277	53.098	0.64249	53.094	52.636	53.279	-0.0033035	0.1271	0.0014367	NaN	87.754	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87661			16501	8340	11230	11239							0.1262842283366581
IIAIVVRKPSV	11	Unmodified	_IIAIVVRKPSV_					0	0	0		ENST00000399070.3_2_18:32886564-32887857:+|nuORF	ENST00000399070.3_2_18:32886564-32887857:+|nuORF	ENST00000399070.3_2_18:32886564-32887857:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8982543945312	2	597.900266	1193.78598	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.692	1	68.692	68.192	69.192	0								0	0	0	0.56276	1	6105	6105		14.137	2.6261	1				16502	11200	11231	11240	19083	19083					0.19683692150306342
IIAKAVFILL	10	Unmodified	_IIAKAVFILL_					0	0	0		ENST00000609104.5_1_10:11504347-11504431:-|nuORF	ENST00000609104.5_1_10:11504347-11504431:-|nuORF	ENST00000609104.5_1_10:11504347-11504431:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.87890625	2	550.875728	1099.7369	3.4102	0.0018786	2.9338	0.0016162	6.344	0.0034947	550.8772112738451	108.99	0.56081	108.96	108.67	109.23	-0.029381					52	22	3	0	0	0	0.85939	2	12098	12088;12098		23.042	6.5693	1	2297500			16503	14481	11232	11241	19084;19085	19085					0.19102403861370476
IIAKAVFILL	10	Unmodified	_IIAKAVFILL_					0	0	0		ENST00000609104.5_1_10:11504347-11504431:-|nuORF	ENST00000609104.5_1_10:11504347-11504431:-|nuORF	ENST00000609104.5_1_10:11504347-11504431:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8799438476562	2	550.875728	1099.7369	5.0694	0.0027926	1.3496	0.00074346	6.419	0.003536	550.8764150186146	108.94	0.53165	109.03	108.77	109.3	0.09005					44	23	2	0	0	0	0.88106	2	13263	13263;13280		12.207	3.9756	1	1145600			16504	14481	11232	11241	19086;19087	19086					0.19102403861370476
IIAKIRRPTR	10	Unmodified	_IIAKIRRPTR_					0	0	0			REV__ENSG00000150594|ENST00000280155|ADRA2A	REV__ENSG00000150594|ENST00000280155|ADRA2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	409.292236328125	3	408.606813	1222.79861	0.91167	0.00037251	0.56488	0.00023081	1.4766	0.00060333	408.605633628192	19.194	0.56445	19.267	19.012	19.576	0.073465					25	17	2	0	0	0	0.37624	1	366	366		18.531	9.3192	1	18965	+		16505	20214	11233	11242	19088	19088					0.1961214833320355
IIALCTHLQ	9	Carbamidomethyl (C)	_IIALC(Carbamidomethyl (C))THLQ_	IIALC(1)THLQ		IIALC(44)THLQ		0	1	0		ENSG00000146476|ENST00000367294|ARMT1	ENSG00000146476|ENST00000367294|ARMT1	ENSG00000146476|ENST00000367294|ARMT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	534.7948608398438	2	534.797152	1067.57975	-0.052811	-2.8243E-05	-3.3488	-0.001791	-3.4017	-0.0018192	534.7953394938359	58.03	0.8242	58.016	57.676	58.5	-0.013638					56	27	3	0	0	0	0.64922	1	5264	5264		44.117	6.9577	1	226440			16506	4850	11234	11243	19089	19089	65				0.048663759795317674
IIALCTHLQ	9	Carbamidomethyl (C)	_IIALC(Carbamidomethyl (C))THLQ_	IIALC(1)THLQ		IIALC(56)THLQ		0	1	0		ENSG00000146476|ENST00000367294|ARMT1	ENSG00000146476|ENST00000367294|ARMT1	ENSG00000146476|ENST00000367294|ARMT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	534.7938842773438	2	534.797152	1067.57975	0.45031	0.00024083	-3.8839	-0.0020771	-3.4336	-0.0018363	534.7950510361543	57.905	0.66258	58.016	57.771	58.433	0.11027					45	31	2	0	0	0	0.43338	1	4925	4925		55.504	7.5886	1	233180			16507	4850	11234	11243	19090	19090	65				0.048663759795317674
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.796142578125	2	491.796955	981.579357	-1.4864	-0.00073099	-0.75568	-0.00037164	-2.2421	-0.0011026	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.7932	1	4325	4325		20.947	0.4651	1	781720	+		16508	16566	11235	11244	19091	19091					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7958984375	2	491.796955	981.579357	-0.0088364	-4.3457E-06	-2.3736	-0.0011673	-2.3824	-0.0011717	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.7932	1	4748	4748		23.042	0	1	782460	+		16509	16566	11235	11244	19092	19092					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.796875	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.338	1	59.324	58.824	59.824	-0.013729								0	0	0	0.2969	1	5440	5440		31.955	8.9124	1		+		16510	16566	11235	11244	19093	19093					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7959289550781	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.755	1	56.726	56.226	57.226	-0.02866								0	0	0	0.31828	1	5204	5204		24.203	4.8428	1		+		16511	16566	11235	11244	19094	19094					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79595947265625	2	491.796955	981.579357	-1.7961	-0.00088329	-0.45068	-0.00022164	-2.2467	-0.0011049	491.7966581870457	51.567	1.6539	51.579	50.697	52.351	0.012436					117	46	3	0	0	0	0.7932	1	4437	4437		23.042	1.0826	1	354980	+		16512	16566	11235	11244	19095	19095					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7956848144531	2	491.796955	981.579357	-1.8635	-0.00091647	-0.58818	-0.00028927	-2.4517	-0.0012057	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.7932	1	4620	4620		24.203	1.1603	1	703950	+		16513	16566	11235	11244	19096	19096					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.796142578125	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.853	1	56.886	56.386	57.386	0.033184								0	0	0	0.32159	1	5149	5149		23.042	1.0826	1		+		16514	16566	11235	11244	19097	19097					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7961120605469	2	491.796955	981.579357	-0.72436	-0.00035624	-2.4929	-0.001226	-3.2173	-0.0015822	491.79558867203156	43.471	1.2464	43.477	42.933	44.179	0.0057487					50	30	2	0	0	0	0.7932	1	2985	2985		23.042	1.0826	1	198180	+		16515	16566	11235	11244	19098	19098					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957458496094	2	491.796955	981.579357	-0.72033	-0.00035426	-1.9286	-0.00094846	-2.6489	-0.0013027	491.7958614454625	45.142	1.3703	45.154	44.592	45.963	0.012058					80	34	3	0	0	0	0.78536	2	3247	3247;3283		29.15	6.8378	1	396090	+		16516	16566	11235	11244	19099;19100	19099					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958068847656	2	491.796955	981.579357	-0.71756	-0.00035289	-1.783	-0.00087689	-2.5006	-0.0012298	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.7932	1	3445	3445		24.203	2.5004	1	2747400	+		16517	16566	11235	11244	19101	19101					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7959289550781	2	491.796955	981.579357	-0.71315	-0.00035073	-1.6418	-0.00080745	-2.355	-0.0011582	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.7932	1	3828	3828		17.365	0.89182	1	1219600	+		16518	16566	11235	11244	19102	19102					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79522705078125	2	491.796955	981.579357	-0.71044	-0.00034939	-1.7767	-0.00087377	-2.4871	-0.0012232	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.78536	3	3976	3976;4085;4116		29.15	2.3535	1	571510	+		16519	16566	11235	11244	19103;19104;19105	19103					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956848144531	2	491.796955	981.579357	-0.70573	-0.00034708	-1.8748	-0.00092201	-2.5805	-0.0012691	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.7932	1	4295	4295		23.042	1.3402	1	772710	+		16520	16566	11235	11244	19106	19106					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7966003417969	2	491.796955	981.579357	-0.70147	-0.00034498	-1.5541	-0.0007643	-2.2556	-0.0011093	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.7932	2	4702	4702;4710		24.203	4.8428	1	1759500	+		16521	16566	11235	11244	19107;19108	19107					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79595947265625	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.64	1	56.712	56.212	57.212	0.071835								0	0	0	0.30778	1	4769	4769		27.882	1.0861	1		+		16522	16566	11235	11244	19109	19109					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957458496094	2	491.796955	981.579357	0.32756	0.00016109	-2.8578	-0.0014055	-2.5302	-0.0012444	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.7932	2	3786	3786;3843		23.042	2.5999	1	1346800	+		16523	16566	11235	11244	19110;19111	19110					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.795654296875	2	491.796955	981.579357	0.34914	0.0001717	-2.6215	-0.0012892	-2.2724	-0.0011175	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.78536	2	3991	3983;3991		29.15	2.3535	1	581270	+		16524	16566	11235	11244	19112;19113	19113					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7959289550781	2	491.796955	981.579357	-0.25318	-0.00012451	-2.1971	-0.0010805	-2.4503	-0.001205	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.77546	1	3815	3815		31.955	1.4512	1	1502200	+		16525	16566	11235	11244	19114	19114					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7955627441406	2	491.796955	981.579357	-0.344	-0.00016918	-1.9041	-0.00093642	-2.2481	-0.0011056	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.78536	1	4014	4014		29.15	0.89528	1	412030	+		16526	16566	11235	11244	19115	19115					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7959899902344	2	491.796955	981.579357	-0.53143	-0.00026136	-1.5236	-0.00074929	-2.055	-0.0010106	491.79619139735206	56.69	1.2684	56.664	56.294	57.562	-0.026108					93	62	2	0	0	0	0.7932	1	4805	4805		18.324	1.8513	1	1036100	+		16527	16566	11235	11244	19116	19116					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.8009948730469	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.891	1	64.928	64.428	65.428	0.037849								0	0	0	0.2969	1	5739	5739		31.955	3.7006	1		+		16528	16566	11235	11244	19117	19117					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7926330566406	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.328	1	67.38	66.88	67.88	0.052368								0	0	0	0.31828	1	5993	5993		24.203	0	1		+		16529	16566	11235	11244	19118	19118					0.08783001050346684
IIALKCGHK	9	Unmodified	_IIALKCGHK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7938232421875	2	491.796955	981.579357	-1.9178	-0.00094317	-2.7431	-0.0013491	-4.6609	-0.0022922	491.795512765235	43.373	1.1256	44.147	43.54	44.665	0.77379					67	27	3	0	0	0	0.7932	1	3891	3891		23.042	2.5607	1	1540600	+		16530	16566	11235	11244	19119	19119					0.08783001050346684
IIANCIILA	9	Unmodified	_IIANCIILA_					0	0	0			REV__ENSG00000258839|ENST00000555147|MC1R	REV__ENSG00000258839|ENST00000555147|MC1R	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7889099121094	2	472.285889	942.557224	2.1484	0.0010146	2.0198	0.00095391	4.1681	0.0019686	472.28673091824714	113.99	1.2395	114.01	113.14	114.38	0.020027					83	56	2	0	0	0	0.7932	1	13739	13739		26.796	1.222	1	98727	+		16531	23930	11236	11245	19120	19120					0.08364776581925071
IIAPVLFYI	9	Unmodified	_IIAPVLFYI_					0	0	0			REV__nc|ENSG00000140279|Q9NRD8|DUOX2	REV__nc|ENSG00000140279|Q9NRD8|DUOX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8272705078125	2	524.825704	1047.63685	0.8139	0.00042716	1.4579	0.00076513	2.2718	0.0011923	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.78292	1	10497	10497		29.842	4.2675	1	27719000	+		16532	19604	11237	11246	19121	19121					0.1149416652756372
IIAPVLFYI	9	Unmodified	_IIAPVLFYI_					0	0	0			REV__nc|ENSG00000140279|Q9NRD8|DUOX2	REV__nc|ENSG00000140279|Q9NRD8|DUOX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8265991210938	2	524.825704	1047.63685	0.82695	0.00043401	2.2696	0.0011912	3.0966	0.0016252	524.826769505368	102.16	1.0919	102.29	101.89	102.98	0.13523					72	26	3	0	0	0	0.78292	1	10735	10735		29.842	7.8817	1	650470	+		16533	19604	11237	11246	19122	19122					0.1149416652756372
IIAVGHCV	8	Unmodified	_IIAVGHCV_					0	0	0			REV__chr11:65666217-65671423|63|33.87|0.0|21.69|+|0|RELA-DT,RELA-DT|1	REV__chr11:65666217-65671423|63|33.87|0.0|21.69|+|0|RELA-DT,RELA-DT|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.248291015625	2	406.228374	810.442194	-1.8137	-0.00073678	-1.3769	-0.00055934	-3.1906	-0.0012961	406.2280270994467	88.117	0.28757	88.318	88.059	88.346	0.20115					11	6	2	0	0	0	0.4196	1	8694	8694		33.493	0	1	325620	+		16534	15503	11238	11247	19123	19123					0.02939092170765889
IIAVLAAY	8	Unmodified	_IIAVLAAY_					0	0	0			REV__ENSG00000163510|ENST00000410053|CWC22	REV__ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2586669921875	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.80127	1	560	560		16.705	0	1	817900	+		16535	20926	11239	11248	19124	19124					0.08288775879509558
IIAVLVSAS	9	Unmodified	_IIAVLVSAS_					0	0	0		ENSG00000147378|ENST00000370350|FATE1	ENSG00000147378|ENST00000370350|FATE1	ENSG00000147378|ENST00000370350|FATE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.7747802734375	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.76996	1	9149	9149		33.516	6.7195	1	13819000			16536	4897	11240	11249	19125	19125					0.09696143562666748
IIAVLVSAS	9	Unmodified	_IIAVLVSAS_					0	0	0		ENSG00000147378|ENST00000370350|FATE1	ENSG00000147378|ENST00000370350|FATE1	ENSG00000147378|ENST00000370350|FATE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7748107910156	2	436.776211	871.537869	-1.8179	-0.00079401	-1.324	-0.00057831	-3.1419	-0.0013723	436.77554812926275	90.686	2.546	90.866	90.262	92.808	0.18029					181	60	4	0	0	0	0.69914	2	9087	9087;9099		40.573	7.057	1	8965000			16537	4897	11240	11249	19126;19127	19126					0.09696143562666748
IIAVSCIEKRH	11	Unmodified	_IIAVSCIEKRH_					0	0	0			REV__ENST00000495593.1_1_1:18021396-18023872:+|nuORF	REV__ENST00000495593.1_1_1:18021396-18023872:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	423.59759521484375	3	423.576302	1267.70708	-1.7163	-0.00072698	2.3803	0.0010082	0.66403	0.00028127	423.5770259450352	105.32	0.18692	105.48	105.4	105.58	0.15924					6	4	2	0	0	0	0.17318	1	11230	11230		22.562	15.902	1	21190	+		16538	16698	11241	11250	19128	19128					0.08393096853706083
IIAWHKKT	8	Unmodified	_IIAWHKKT_					0	0	0		nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8031311035156	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.84341	1	4533	4533		24.203	0	1	2118300			16539	8045	11242	11251	19129	19129					0.09366360785031702
IICFLKILDGR	11	Unmodified	_IICFLKILDGR_					0	0	0			REV__ENST00000496699.1_1_1:117509714-117517097:+|nuORF	REV__ENST00000496699.1_1_1:117509714-117517097:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	645.8837280273438	2	645.883758	1289.75296	1.8764	0.0012119	-1.9975	-0.0012901	-0.1211	-7.8218E-05	645.8823845772775	105.75	1.6428	105.79	105.12	106.77	0.038322					94	38	3	0	0	0	0.7144	2	11581	11581;11594		29.17	10.067	1	1452000	+		16540	19123	11243	11252	19130;19131	19130					0.11967742035949414
IICFLKILDGR	11	Unmodified	_IICFLKILDGR_					0	0	0			REV__ENST00000496699.1_1_1:117509714-117517097:+|nuORF	REV__ENST00000496699.1_1_1:117509714-117517097:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	645.8843994140625	2	645.883758	1289.75296	0.94467	0.00061014	-1.2781	-0.00082551	-0.33344	-0.00021536	645.8828437678978	105.63	1.0903	105.74	105.07	106.16	0.10765					79	27	3	0	0	0	0.74763	1	11299	11299		22.58	0.61977	1	2734800	+		16541	19123	11243	11252	19132	19132					0.11967742035949414
IICIHYPY	8	Unmodified	_IICIHYPY_					0	0	0			REV__nc|ENSG00000145868|Q6PIJ6-3|FBXO38	REV__nc|ENSG00000145868|Q6PIJ6-3|FBXO38	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.7655334472656	2	511.262413	1020.51027	0.63471	0.0003245	2.8452	0.0014547	3.4799	0.0017792	511.2629539615875	54.189	1.3418	54.595	53.986	55.328	0.40663					65	31	4	0	0	0	0.91333	1	5551	5551		43.626	5.8145	1	428000	+		16542	19973	11244	11253	19133	19133					0.0008391703076995327
IICIVKRS	8	Unmodified	_IICIVKRS_					0	0	0			REV__ENST00000560964.1_1_15:83486673-83495202:+|nuORF	REV__ENST00000560964.1_1_15:83486673-83495202:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.28924560546875	2	466.291505	930.568457	0.52735	0.0002459	-4.0667	-0.0018963	-3.5394	-0.0016504	466.28951494352106	73.831	0.94804	73.962	73.721	74.669	0.13127					82	37	3	0	0	0	0.93529	1	6836	6836		52.299	5.5327	1	894650	+		16543	28771	11245	11254	19134	19134					0.10039598676064543
IIDARQCIN	9	Unmodified	_IIDARQCIN_					0	0	0			REV__ENST00000515700.5_1_5:39418389-39418428:-|nuORF	REV__ENST00000515700.5_1_5:39418389-39418428:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.276583	1044.53861	-1.4881	-0.00077867	-3.9648	-0.0020747	-5.4529	-0.0028534	523.2740963716535	86.379	1.3641	86.544	86.025	87.389	0.16473					42	31	2	0	0	0	0.20789	1	8416	8416		26.693	0	1	70570	+		16544	28036	11246	11255	19135	19135					0.01812614940081403
IIDDKLKPWLI	11	Unmodified	_IIDDKLKPWLI_					0	0	0		ENSG00000100271|ENST00000266254|TTLL1	ENSG00000100271|ENST00000266254|TTLL1	ENSG00000100271|ENST00000266254|TTLL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9422607421875	3	451.942868	1352.80677	0.028854	1.304E-05	0.895	0.00040449	0.92385	0.00041753	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.76087	1	4890	4890		19.627	0.36425	1	513120			16545	1816	11247	11256	19136	19136					0.14448237739316028
IIDKLLKVFHN	11	Unmodified	_IIDKLLKVFHN_					0	0	0			REV__ENSG00000168152|ENST00000302236|THAP9	REV__ENSG00000168152|ENST00000302236|THAP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.273681640625	3	447.274729	1338.80236	-1.7854	-0.00079855	-2.3253	-0.0010401	-4.1107	-0.0018386	447.27362843006824	106.96	1.1721	107.02	106.47	107.64	0.053757					124	27	6	0	0	0	0.72374	1	11360	11360		27.644	2.5761	1	15545000	+		16546	21467	11248	11257	19137	19137					0.1465077331640714
IIDLLLCIF	9	Unmodified	_IIDLLLCIF_					0	0	0		ENST00000323571.8_1_17:38437179-38437275:+|nuORF	ENST00000323571.8_1_17:38437179-38437275:+|nuORF	ENST00000323571.8_1_17:38437179-38437275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8171997070312	2	531.817021	1061.61949	-0.026806	-1.4256E-05	0.017722	9.4248E-06	-0.0090843	-4.8312E-06	531.8169542279844	101.04	0.67387	101.24	100.88	101.55	0.2058					38	16	3	0	0	0	0.78851	1	10577	10577		28.254	0.37203	1	448570			16547	10052	11249	11258	19138	19138					0.09114502930242452
IIDQEVLGLE	10	Unmodified	_IIDQEVLGLE_					0	0	0			REV__ENSG00000276747|ENST00000619609|PADI6	REV__ENSG00000276747|ENST00000619609|PADI6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	564.6728515625	2	564.810979	1127.6074	0.46019	0.00025992	-1.2995	-0.00073394	-0.83926	-0.00047402	564.8102369285413	110.04	1.0048	110.16	110.11	111.12	0.12289					64	36	2	0	0	0	0.8608	1	11857	11857		34.173	0.25091	1	449700	+		16548	24020	11250	11259	19139	19139					0.04870557720778379
IIDQEVLGLE	10	Unmodified	_IIDQEVLGLE_					0	0	0			REV__ENSG00000276747|ENST00000619609|PADI6	REV__ENSG00000276747|ENST00000619609|PADI6	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	564.810979	1127.6074	0.46019	0.00025992	-1.2995	-0.00073394	-0.83926	-0.00047402	564.8102369285413	110.04	1.0048	110.16	110.11	111.12	0.12289	0.10484	0.0024737	NaN	34.173	64	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	449700	+		16549	24020	11250	11259							0.04870557720778379
IIDQEVLGLE	10	Unmodified	_IIDQEVLGLE_					0	0	0			REV__ENSG00000276747|ENST00000619609|PADI6	REV__ENSG00000276747|ENST00000619609|PADI6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	564.810979	1127.6074	6.1019	0.0034464	-6.9554	-0.0039285	-0.85353	-0.00048208	564.8070165257842	109.88	1.2734	109.95	109.84	111.11	0.068001	-0.10484	-0.0039154	NaN	34.173	64	50	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	359550	+		16550	24020	11250	11259							0.04870557720778379
IIDVSGGTSP	10	Unmodified	_IIDVSGGTSP_					0	0	0			REV__nc|ENSG00000171634|Q12830-4|BPTF	REV__nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.24835205078125	2	473.248015	944.481476	-0.51455	-0.00024351	0.54458	0.00025772	0.030035	1.4214E-05	473.24818540235697	28.981	1.8023	28.961	28.523	30.325	-0.019407					101	54	4	0	0	0	0.18001	1	1416	1416		90.777	19.399	1	574970	+		16551	21757	11251	11260	19140	19140					0.00701470935348425
IIECLKYI	8	Unmodified	_IIECLKYI_					0	0	0		nc|ENSG00000113522|Q92878-2|RAD50;ENSG00000113522|ENST00000378823|RAD50	nc|ENSG00000113522|Q92878-2|RAD50	nc|ENSG00000113522|Q92878-2|RAD50	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.78741455078125	2	497.785721	993.55689	0.10344	5.1491E-05	3.6103	0.0017971	3.7137	0.0018486	497.7873670915065	23.255	0.78478	22.836	22.544	23.328	-0.41879					47	18	4	0	0	0	0.94132	1	999	999		54.765	2.4655	1	463980			16552	2726	11252	11261	19141	19141					0.05985356862061053
IIECLKYI	8	Unmodified	_IIECLKYI_					0	0	0		nc|ENSG00000113522|Q92878-2|RAD50;ENSG00000113522|ENST00000378823|RAD50	nc|ENSG00000113522|Q92878-2|RAD50	nc|ENSG00000113522|Q92878-2|RAD50	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7869873046875	2	497.785721	993.55689	0.6952	0.00034606	3.1521	0.0015691	3.8473	0.0019151	497.787148151759	23.215	0.7412	22.641	22.436	23.178	-0.57415					43	17	4	0	0	0	0.88915	1	1003	1003		35.201	3.6709	1	612690			16553	2726	11252	11261	19142	19142					0.05985356862061053
IIEEKRKEHK	10	Unmodified	_IIEEKRKEHK_					0	0	0		ENSG00000085760|ENST00000263629|MTIF2	ENSG00000085760|ENST00000263629|MTIF2	ENSG00000085760|ENST00000263629|MTIF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.25714111328125	3	437.257738	1308.75138	-1.8163	-0.00079418	0.93317	0.00040803	-0.8831	-0.00038614	437.2580894693445	99.183	2.5872	99.369	98.322	100.91	0.18581					159	59	3	0	0	0	0.86621	1	10233	10233		26.063	0.9956	1	447430			16554	1540	11253	11262	19143	19143					0.10935824271541605
IIEENIPEL	9	Unmodified	_IIEENIPEL_					0	0	0		ENSG00000162231|ENST00000294172|NXF1;ENST00000531579.5_1_11:62564685-62568887:-|nuORF;nc|ENSG00000162231|Q9UBU9-2|NXF1	ENSG00000162231|ENST00000294172|NXF1	ENSG00000162231|ENST00000294172|NXF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2922973632812	2	535.292422	1068.57029	-0.21106	-0.00011298	0.53651	0.00028719	0.32545	0.00017421	535.2926273874909	82.637	0.70296	83.111	82.753	83.456	0.47383					39	16	3	0	0	0	0.58668	1	9608	9608		47.657	5.2612	1	748540			16555	5674	11254	11263	19144	19144					0.038748861749809294
IIEEYSKANTN	11	Unmodified	_IIEEYSKANTN_					0	0	0			REV__ENSG00000010818|ENST00000367603|HIVEP2	REV__ENSG00000010818|ENST00000367603|HIVEP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8817749023438	2	641.319699	1280.62485	1.4957	0.00095924	0.25181	0.00016149	1.7475	0.0011207	641.3192835081409	97.814	0.40892	98.2	97.973	98.382	0.38548					15	9	2	0	0	0	0.17226	1	11730	11730		35.152	0	1	144130	+		16556	16173	11255	11264	19145	19145					-0.004241467442398061
IIEFKKLAN	9	Unmodified	_IIEFKKLAN_					0	0	0		nc|ENSG00000197818|Q9Y2E8-2|SLC9A8;ENSG00000197818|ENST00000361573|SLC9A8	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.327880859375	2	538.329142	1074.64373	0.070633	3.8024E-05	-4.4231	-0.0023811	-4.3525	-0.0023431	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.78983	1	10954	10954		27.882	1.1893	1	109840000			16557	8202	11256	11265	19146	19146					0.10939479408125408
IIEGISIYIV	10	Unmodified	_IIEGISIYIV_					0	0	0			REV__ENSG00000140575|ENST00000268182|IQGAP1	REV__ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8469848632812	2	560.336633	1118.65871	3.1454	0.0017625	3.4672	0.0019428	6.6126	0.0037053	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.84874	1	13229	13229		18.324	0.95945	1	151040	+		16558	19633	11257	11266	19147	19147					0.10412926485446405
IIEILSYERF	10	Unmodified	_IIEILSYERF_					0	0	0			REV__ENSG00000185149|ENST00000329476|NPY2R	REV__ENSG00000185149|ENST00000329476|NPY2R	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.85888671875	2	641.855721	1281.69689	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.77	1	113.77	113.27	114.27	0.0011978								0	0	0	0.45132	1	13730	13730		25.574	2.0514	1		+		16559	22740	11258	11267	19148	19148					0.06730812400110153
IIEMVLNLT	9	Unmodified	_IIEMVLNLT_					0	0	0		nc|ENSG00000204403|Q6UXS9-2|CASP12	nc|ENSG00000204403|Q6UXS9-2|CASP12	nc|ENSG00000204403|Q6UXS9-2|CASP12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3040161132812	2	523.301736	1044.58892	3.0919	0.001618	0.81821	0.00042817	3.9101	0.0020462	523.3019807160215	101.24	1.6009	101.19	100.54	102.14	-0.049835					80	37	4	0	0	0	0.7932	1	11005	11005		25.45	1.2474	1	999760			16560	15209	11259	11268	19149	19149					0.06840724545190824
IIEYTELAK	9	Unmodified	_IIEYTELAK_					0	0	0			REV__ENSG00000083097|ENST00000349129|DOP1A;REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	REV__ENSG00000083097|ENST00000349129|DOP1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.3021850585938	2	540.30279	1078.59103	1.2647	0.0006833	-2.1205	-0.0011457	-0.85586	-0.00046242	540.301492421599	24.294	0.65065	23.781	23.494	24.144	-0.51365					30	14	3	0	0	0	0.69624	1	1169	1169		40.778	1.5253	1	313710	+		16561	16847;19729	11260	11269	19150	19150					0.05487476554640125
IIFDRPLLY	9	Unmodified	_IIFDRPLLY_					0	0	0		ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2977294921875	2	575.336967	1148.65938	-0.28801	-0.0001657	-0.19735	-0.00011354	-0.48536	-0.00027924	575.3365080339928	76.968	0.49362	77.367	77.22	77.714	0.39969					20	13	2	0	0	0	0.20177	1	8744	8744		87.696	43.58	1	379580			16562	7004	11261	11270	19151	19151					0.09099765925202519
IIFEVILVF	9	Unmodified	_IIFEVILVF_					0	0	0			REV__ENSG00000212127|ENST00000537503|TAS2R14	REV__ENSG00000212127|ENST00000537503|TAS2R14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8402709960938	2	546.838811	1091.66307	-0.4953	-0.00027085	2.6074	0.0014258	2.1121	0.001155	546.8402497724348	101.28	3.7061	101.28	100.69	104.39	0					228	91	5	0	0	0	0.76402	1	10323	10323		35.201	3.6709	1	22090000	+		16563	23601	11262	11271	19152	19152					0.12090435699042246
IIFEVILVF	9	Unmodified	_IIFEVILVF_					0	0	0			REV__ENSG00000212127|ENST00000537503|TAS2R14	REV__ENSG00000212127|ENST00000537503|TAS2R14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8397216796875	2	546.838811	1091.66307	-0.41161	-0.00022509	1.9321	0.0010565	1.5204	0.00083144	546.8400747085221	101.16	3.89	101.19	100.52	104.41	0.031036					283	93	6	0	0	0	0.64338	3	10791	10779;10791;10911		44.531	8.9128	1	40007000	+		16564	23601	11262	11271	19153;19154;19155	19154					0.12090435699042246
IIFEVILVF	9	Unmodified	_IIFEVILVF_					0	0	0			REV__ENSG00000212127|ENST00000537503|TAS2R14	REV__ENSG00000212127|ENST00000537503|TAS2R14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8400268554688	2	546.838811	1091.66307	3.386	0.0018516	-1.8484	-0.0010108	1.5376	0.00084083	546.8379771318001	101.02	3.777	100.97	100.36	104.13	-0.052116					284	90	6	0	0	0	0.76402	1	11014	11014		35.201	1.6851	1	39176000	+		16565	23601	11262	11271	19156	19156					0.12090435699042246
IIFEVILVF	9	Unmodified	_IIFEVILVF_					0	0	0			REV__ENSG00000212127|ENST00000537503|TAS2R14	REV__ENSG00000212127|ENST00000537503|TAS2R14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.840087890625	2	546.838811	1091.66307	1.265	0.00069175	0.54057	0.00029561	1.8056	0.00098735	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.76402	2	10876	10876;10936		35.201	1.3459	1	39577000	+		16566	23601	11262	11271	19157;19158	19157					0.12090435699042246
IIFEVILVF	9	Unmodified	_IIFEVILVF_					0	0	0			REV__ENSG00000212127|ENST00000537503|TAS2R14	REV__ENSG00000212127|ENST00000537503|TAS2R14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.8400268554688	2	546.838811	1091.66307	0.19665	0.00010754	1.2699	0.00069442	1.4665	0.00080195	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.76402	2	10573	10573;10725		35.201	6.0512	1	55511000	+		16567	23601	11262	11271	19159;19160	19159					0.12090435699042246
IIFEVILVF	9	Unmodified	_IIFEVILVF_					0	0	0			REV__ENSG00000212127|ENST00000537503|TAS2R14	REV__ENSG00000212127|ENST00000537503|TAS2R14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.84033203125	2	546.838811	1091.66307	0.84844	0.00046396	0.94515	0.00051684	1.7936	0.0009808	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.76402	6	10519	10519;10578;10614;10660;10696;10766		35.201	9.7505	1	43597000	+		16568	23601	11262	11271	19161;19162;19163;19164;19165;19166	19161					0.12090435699042246
IIFEVILVF	9	Unmodified	_IIFEVILVF_					0	0	0			REV__ENSG00000212127|ENST00000537503|TAS2R14	REV__ENSG00000212127|ENST00000537503|TAS2R14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8407592773438	2	546.838811	1091.66307	0.96702	0.0005288	1.2571	0.00068743	2.2241	0.0012162	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.76402	3	12202	12166;12202;12250		35.201	8.0654	1	9124000	+		16569	23601	11262	11271	19167;19168;19169	19168					0.12090435699042246
IIFEVILVF	9	Unmodified	_IIFEVILVF_					0	0	0			REV__ENSG00000212127|ENST00000537503|TAS2R14	REV__ENSG00000212127|ENST00000537503|TAS2R14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.840087890625	2	546.838811	1091.66307	2.1573	0.0011797	0.16127	8.819E-05	2.3186	0.0012679	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.76996	1	12314	12314		33.516	5.6333	1	10074000	+		16570	23601	11262	11271	19170	19170					0.12090435699042246
IIFFSRVPSK	10	Unmodified	_IIFFSRVPSK_					0	0	0		ENST00000590655.1_1_19:44436750-44438596:-|nuORF;ENST00000588432.1_1_19:44435494-44438596:-|nuORF;ENST00000269973.9_1_19:44429548-44438596:-|nuORF	ENST00000590655.1_1_19:44436750-44438596:-|nuORF	ENST00000590655.1_1_19:44436750-44438596:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.8560180664062	2	597.355691	1192.69683	-0.84393	-0.00050413	1.3726	0.00081991	0.52864	0.00031578	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.86272	1	10931	10931		24.519	1.4767	1	1407500			16571	9551	11263	11272	19171	19171					0.10818857190793096
IIFGLSTLKLF	11	Unmodified	_IIFGLSTLKLF_					0	0	0			REV__ENSG00000164604|ENST00000424100|GPR85	REV__ENSG00000164604|ENST00000424100|GPR85	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.8929443359375	2	626.389199	1250.76385	-1.2033	-0.00075372	-2.7712	-0.0017359	-3.9745	-0.0024896	626.3871390536368	109.94	1.1883	109.95	109.68	110.87	0.0060501					79	40	3	0	0	0	0.71452	1	11697	11697		29.15	1.2673	1	879220	+		16572	21094	11264	11273	19172	19172					0.14849467681892747
IIFHQKTGKRR	11	Unmodified	_IIFHQKTGKRR_					0	0	0		ENST00000401042.7_1_1:67425382-67436550:+|nuORF	ENST00000401042.7_1_1:67425382-67436550:+|nuORF	ENST00000401042.7_1_1:67425382-67436550:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	461.94805908203125	3	461.949239	1382.82589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.8	1	112.83	112.33	113.33	0.028854								0	0	0	0.56276	1	12312	12312		23.378	4.8469	1				16573	11233	11265	11274	19173	19173					0.14978631873577797
IIFHQKTGKRR	11	Unmodified	_IIFHQKTGKRR_					0	0	0		ENST00000401042.7_1_1:67425382-67436550:+|nuORF	ENST00000401042.7_1_1:67425382-67436550:+|nuORF	ENST00000401042.7_1_1:67425382-67436550:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	461.948486328125	3	461.949239	1382.82589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.28	1	113.31	112.81	113.81	0.027321								0	0	0	0.56276	1	12375	12375		24.232	1.6702	1				16574	11233	11265	11274	19174	19174					0.14978631873577797
IIFLVILSVF	10	Unmodified	_IIFLVILSVF_					0	0	0		ENSG00000167105|ENST00000507382|TMEM92	ENSG00000167105|ENST00000507382|TMEM92	ENSG00000167105|ENST00000507382|TMEM92	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3533325195312	2	582.375561	1162.73657	0.72049	0.0004196	-2.05	-0.0011939	-1.3295	-0.00077429	582.3735987702121	103.33	0.38737	103.51	103.43	103.82	0.18298					19	9	3	0	0	0	0.37624	1	10920	10920		25.45	12.491	1	495270			16575	6268	11266	11275	19175	19175					0.16170984141513145
IIFNYLVL	8	Unmodified	_IIFNYLVL_					0	0	0			REV__ENSG00000058063|ENST00000323116|ATP11B	REV__ENSG00000058063|ENST00000323116|ATP11B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.8017883300781	2	497.802229	993.589904	-0.64969	-0.00032342	-3.5738	-0.001779	-4.2235	-0.0021024	497.8003068501005	69.219	0.68383	69.182	68.854	69.538	-0.036964					74	32	3	0	0	0	0.884	1	6730	6730		33.516	3.0119	1	424530	+		16576	16432	11267	11276	19176	19176					0.09285306976403263
IIFSKEILPLH	11	Unmodified	_IIFSKEILPLH_					0	0	0			REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2677307128906	3	437.267463	1308.78056	1.2133	0.00053055	-0.31759	-0.00013887	0.89574	0.00039168	437.2672396896614	50.554	1.7579	50.562	49.504	51.262	0.0077477					187	47	5	0	0	0	0.74405	1	4257	4257		23.378	0	1	3327600	+		16577	29873	11268	11277	19177	19177					0.1385196856786024
IIFSKEILPLH	11	Unmodified	_IIFSKEILPLH_					0	0	0			REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.267822265625	3	437.267463	1308.78056	-0.49223	-0.00021524	1.4681	0.00064197	0.9759	0.00042673	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.71207	1	3958	3958		29.551	4.4248	1	3262400	+		16578	29873	11268	11277	19178	19178					0.1385196856786024
IIFSKEILPLH	11	Unmodified	_IIFSKEILPLH_					0	0	0			REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2677917480469	3	437.267463	1308.78056	-1.0896	-0.00047642	1.9138	0.00083683	0.82421	0.0003604	437.2682076309449	48.376	1.4718	48.845	48.119	49.591	0.46941					123	36	4	0	0	0	0.74405	1	4617	4617		23.378	0	1	3096400	+		16579	29873	11268	11277	19179	19179					0.1385196856786024
IIFSYVRAIGI	11	Unmodified	_IIFSYVRAIGI_					0	0	0		ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.92242431640625	3	417.920174	1250.73869	3.1807	0.0013293	1.9124	0.00079924	5.0931	0.0021285	417.9209605426618	105.73	2.7025	105.77	104.99	107.7	0.038322					262	63	6	0	0	0	0.77538	1	11658	11658		10.104	0.45776	1	23553000			16580	1576	11269	11278	19180	19180					0.123354128793153
IIFTTSTG	8	Unmodified	_IIFTTSTG_					0	0	0			REV__ENST00000314218.7_1_4:123653928-123663169:+|nuORF	REV__ENST00000314218.7_1_4:123653928-123663169:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22674560546875	2	420.229094	838.443634	-1.3512	-0.00056782	-1.7107	-0.00071887	-3.0619	-0.0012867	420.2282629742312	76.938	2.2039	76.938	74.958	77.162	0					134	85	2	0	0	0	0.87276	1	6894	6894		29.842	1.5873	1	154140	+		16581	24933	11270	11279	19181	19181					0.017950047405292935
IIFVSLFLLFQ	11	Unmodified	_IIFVSLFLLFQ_					0	0	0		ENST00000319725.9_1_9:133512585-133512708:+|nuORF	ENST00000319725.9_1_9:133512585-133512708:+|nuORF	ENST00000319725.9_1_9:133512585-133512708:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.2744445800781	3	447.272325	1338.79515	-1.7854	-0.00079855	3.0485	0.0013635	1.2631	0.00056494	447.27362843006824	106.96	1.1721	107.02	106.47	107.64	0.053757					124	27	6	0	0	0	0.76579	1	11482	11482		18.531	2.0012	1	15545000			16582	10021	11271	11280	19182	19182					0.139300407159908
IIFYVSLF	8	Unmodified	_IIFYVSLF_					0	0	0			REV__nc|ENSG00000143771|Q9P003-2|CNIH4	REV__nc|ENSG00000143771|Q9P003-2|CNIH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2908935546875	2	501.288954	1000.56336	-0.17938	-8.992E-05	3.6917	0.0018506	3.5123	0.0017607	501.29064541648853	99.317	1.4422	99.365	98.853	100.3	0.047523					88	33	4	0	0	0	0.89457	1	10633	10633		37.028	6.7108	1	1053700	+		16583	19838	11272	11281	19183	19183					0.06309618085083457
IIGAALPAS	9	Unmodified	_IIGAALPAS_					0	0	0			REV__ENSG00000140564|ENST00000268171|FURIN	REV__ENSG00000140564|ENST00000268171|FURIN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	407.287353515625	2	406.747453	811.480354	0.40267	0.00016379	3.0146	0.0012262	3.4173	0.00139	406.74880059323885	63.944	0.49262	64.067	63.877	64.37	0.12389					26	19	2	0	0	0	0.20789	1	5653	5653		18.324	6.8134	1	57304	+		16584	19632	11273	11282	19184	19184					0.06707301357073447
IIGAEEVPLL	10	Unmodified	_IIGAEEVPLL_					0	0	0			REV__ENSG00000103335|ENST00000301015|PIEZO1	REV__ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	527.3087158203125	2	527.313158	1052.61176	0.6568	0.00034634	-3.7968	-0.0020021	-3.14	-0.0016558	527.3113178153096	81.798	1.2908	81.944	80.997	82.288	0.1455					55	29	2	0	0	0	0.84112	1	7772	7772		37.159	1.5408	1	176680	+		16585	17405	11274	11283	19185	19185					0.08756066934324735
IIGAVTAPDL	10	Unmodified	_IIGAVTAPDL_					0	0	0			REV__ENSG00000167286|ENST00000300692|CD3D	REV__ENSG00000167286|ENST00000300692|CD3D	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2879943847656	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.113	1	76.247	75.747	76.747	0.13325								0	0	0	0.45132	1	7110	7110		44.117	8.4985	1		+		16586	21373	11275	11284	19186	19186					0.06871224728752168
IIGFVLVQ	8	Unmodified	_IIGFVLVQ_					0	0	0			REV__ENSG00000131379|ENST00000253697|C3orf20	REV__ENSG00000131379|ENST00000253697|C3orf20	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.7246398925781	2	444.781296	887.54804	1.0916	0.0004855	-0.72376	-0.00032191	0.36779	0.00016359	444.78080919611125	100.66	0.60411	100.96	100.61	101.21	0.2999					18	14	2	0	0	0	0.4196	1	12151	12151		35.201	1.6851	1	88008	+		16587	18948	11276	11285	19187	19187					0.09976751287899788
IIGFVLVQ	8	Unmodified	_IIGFVLVQ_					0	0	0			REV__ENSG00000131379|ENST00000253697|C3orf20	REV__ENSG00000131379|ENST00000253697|C3orf20	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.7251281738281	2	444.781296	887.54804	2.3942	0.0010649	-2.305	-0.0010252	0.089177	3.9664E-05	444.7802517695501	100.67	0.56374	101.02	100.69	101.26	0.34591					18	13	2	0	0	0	0.4196	1	12217	12217		35.201	5.3592	1	145390	+		16588	18948	11276	11285	19188	19188					0.09976751287899788
IIGGAVALVT	10	Unmodified	_IIGGAVALVT_					0	0	0		ENSG00000125848|ENST00000341420|FLRT3	ENSG00000125848|ENST00000341420|FLRT3	ENSG00000125848|ENST00000341420|FLRT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2898864746094	2	457.289485	912.564418	-0.93347	-0.00042687	1.0551	0.00048249	0.12164	5.5625E-05	457.2898110740692	87.286	0.78959	87.74	87.345	88.135	0.45429					45	18	3	0	0	0	0.21734	1	10283	10283		82.305	8.05	1	1900300			16589	3421	11277	11286	19189	19189					0.10463832454001931
IIGGPLLVS	9	Unmodified	_IIGGPLLVS_					0	0	0			REV__ENST00000464362.5_1_22:26875286-26875439:-|nuORF	REV__ENST00000464362.5_1_22:26875286-26875439:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77996826171875	2	434.778754	867.542954	1.0211	0.00044394	2.4757	0.0010764	3.4967	0.0015203	434.77962104590523	33.405	1.0416	33.404	32.826	33.868	-0.0016365					60	24	3	0	0	0	0.76402	1	1953	1953		35.201	3.2459	1	347080	+		16590	27093	11278	11287	19190	19190					0.10388447425282266
IIGGPLLVS	9	Unmodified	_IIGGPLLVS_					0	0	0			REV__ENST00000464362.5_1_22:26875286-26875439:-|nuORF	REV__ENST00000464362.5_1_22:26875286-26875439:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7788391113281	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.76996	1	1894	1894		33.516	6.7195	1	2158200	+		16591	27093	11278	11287	19191	19191					0.10388447425282266
IIGIRIGAAL	10	Unmodified	_IIGIRIGAAL_					0	0	0			REV__ENST00000440940.6_1_5:7897032-7897215:+|nuORF	REV__ENST00000440940.6_1_5:7897032-7897215:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.83148193359375	2	498.831852	995.649151	-1.7906	-0.00089322	-0.28057	-0.00013996	-2.0712	-0.0010332	498.83168509254983	43.951	0.61922	43.949	43.627	44.246	-0.002449					27	15	3	0	0	0	0.85438	1	3430	3430		16.473	0	1	74301	+		16592	26745	11279	11288	19192	19192					0.1511520299059157
IIGLEYLVSL	10	Unmodified	_IIGLEYLVSL_					0	0	0			REV__nc|ENSG00000188467|Q71RS6-2|SLC24A5	REV__nc|ENSG00000188467|Q71RS6-2|SLC24A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3401489257812	2	560.336633	1118.65871	3.1377	0.0017581	3.0866	0.0017295	6.2243	0.0034877	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.85934	1	11427	11427		35.618	5.1146	1	83033000	+		16593	23003	11280	11289	19193	19193					0.10412926485469143
IIGLGLLAAA	10	Unmodified	_IIGLGLLAAA_					0	0	0			REV__nc|ENSG00000168060|Q9UQQ1-6|NAALADL1	REV__nc|ENSG00000168060|Q9UQQ1-6|NAALADL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3016052246094	2	456.299853	910.585153	-0.57201	-0.00026101	1.7645	0.00080516	1.1925	0.00054415	456.30048255320696	43.187	1.813	43.187	42.808	44.621	0.00016785					104	43	4	0	0	0	0.85976	1	3303	3303		35.201	1.6851	1	672310	+		16594	30010	11281	11290	19194	19194					0.12628422833643071
IIGLGLLAAA	10	Unmodified	_IIGLGLLAAA_					0	0	0			REV__nc|ENSG00000168060|Q9UQQ1-6|NAALADL1	REV__nc|ENSG00000168060|Q9UQQ1-6|NAALADL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.2995300292969	2	456.299853	910.585153	-0.43937	-0.00020048	3.4284	0.0015644	2.989	0.0013639	456.30120298830036	51.086	1.2802	51.002	50.191	51.471	-0.084534					68	36	2	0	0	0	0.86786	1	4092	4092		26.796	1.3459	1	96413	+		16595	30010	11281	11290	19195	19195					0.12628422833643071
IIGLIHSLVQ	10	Unmodified	_IIGLIHSLVQ_					0	0	0		ENSG00000182854|ENST00000332238|OR4F15	ENSG00000182854|ENST00000332238|OR4F15	ENSG00000182854|ENST00000332238|OR4F15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8411865234375	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.77314	2	10726	10726;10797		40.778	4.3314	1	44929000			16596	7476	11282	11291	19196;19197	19196					0.12811168299458586
IIGLIPTVG	9	Unmodified	_IIGLIPTVG_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7879638671875	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.76402	1	2754	2754		35.201	6.9464	1	15753000			16597	7880	11283	11292	19198	19198					0.11308733942325944
IIGLIPTVG	9	Unmodified	_IIGLIPTVG_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78778076171875	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.5393	1	3096	3096		50.025	7.5501	1	12471000			16598	7880	11283	11292	19199	19199					0.11308733942325944
IIGLIPTVG	9	Unmodified	_IIGLIPTVG_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879638671875	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.76402	1	2742	2742		35.201	8.4046	1	14534000			16599	7880	11283	11292	19200	19200					0.11308733942325944
IIGLIPTVG	9	Unmodified	_IIGLIPTVG_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.78778076171875	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.67235	2	2820	2635;2820		42.474	6.8562	1	10128000			16600	7880	11283	11292	19201;19202	19202					0.11308733942325944
IIGLIPTVG	9	Unmodified	_IIGLIPTVG_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78802490234375	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	1	2493	2493		18.324	3.6603	1	11532000			16601	7880	11283	11292	19203	19203					0.11308733942325944
IIGLIPTVG	9	Unmodified	_IIGLIPTVG_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7879333496094	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.76402	1	2397	2397		35.201	1.6851	1	12467000			16602	7880	11283	11292	19204	19204					0.11308733942325944
IIGLIPTVG	9	Unmodified	_IIGLIPTVG_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7881774902344	2	441.786579	881.558604	-0.54459	-0.00024059	3.5319	0.0015603	2.9873	0.0013197	441.7881167581505	37.981	2.8453	38.294	37.083	39.929	0.31312					193	69	5	0	0	0	0.76402	1	3079	3079		35.201	5.3592	1	61531000			16603	7880	11283	11292	19205	19205					0.11308733942325944
IIGLIPTVG	9	Unmodified	_IIGLIPTVG_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7880859375	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.76402	1	3373	3373		35.201	1.6851	1	4170800			16604	7880	11283	11292	19206	19206					0.11308733942325944
IIGLIRGK	8	Unmodified	_IIGLIRGK_					0	0	0			REV__nc|ENSG00000114423|Q13191-3|CBLB	REV__nc|ENSG00000114423|Q13191-3|CBLB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3001403808594	2	435.300188	868.585822	-0.33292	-0.00014492	0.65367	0.00028454	0.32075	0.00013962	435.30030600334584	75.563	1.7203	75.517	74.991	76.711	-0.045975					102	48	3	0	0	0	0.81724	1	7415	7415		14.664	0.88877	1	492420	+		16605	18047	11284	11293	19207	19207					0.14627262273370434
IIGLKGNP	8	Unmodified	_IIGLKGNP_					0	0	0			REV__ENSG00000174145|ENST00000309447|NWD2	REV__ENSG00000174145|ENST00000309447|NWD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2572326660156	2	406.255446	810.496338	0.018638	7.5718E-06	3.5962	0.001461	3.6148	0.0014685	406.2568104671837	38.391	1.0373	38.363	37.994	39.031	-0.027843					57	23	3	0	0	0	0.86791	1	2662	2662		28.254	6.5519	1	345700	+		16606	21975	11285	11294	19208	19208					0.08351007593989834
IIGLKGNP	8	Unmodified	_IIGLKGNP_					0	0	0			REV__ENSG00000174145|ENST00000309447|NWD2	REV__ENSG00000174145|ENST00000309447|NWD2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2573547363281	2	406.255446	810.496338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.414	1	66.544	66.044	67.044	0.12996								0	0	0	0.30125	1	5891	5891		20.482	1.1219	1		+		16607	21975	11285	11294	19209	19209					0.08351007593989834
IIGLLWFV	8	Unmodified	_IIGLLWFV_					0	0	0			REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8008728027344	2	480.799489	959.584425	-0.92579	-0.00044512	3.9174	0.0018835	2.9916	0.0014384	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.84567	1	9472	9472		24.504	4.0222	1	7439400	+		16608	29667	11286	11295	19210	19210					0.1030162818460667
IIGLLWFV	8	Unmodified	_IIGLLWFV_					0	0	0			REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.28277587890625	2	480.799489	959.584425	2.8138	0.0013529	0.3298	0.00015857	3.1436	0.0015114	480.79956322090885	102.33	1.2107	102.28	101.62	102.83	-0.047005					36	28	2	0	0	0	0.4196	1	11231	11231		33.493	12.546	1	114740	+		16609	29667	11286	11295	19211	19211					0.1030162818460667
IIGLLWFV	8	Unmodified	_IIGLLWFV_					0	0	0			REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.8009338378906	2	480.799489	959.584425	-0.79098	-0.0003803	3.4606	0.0016638	2.6696	0.0012835	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.88393	1	9828	9828		33.493	1.5381	1	18644000	+		16610	29667	11286	11295	19212	19212					0.1030162818460667
IIGLLWFV	8	Unmodified	_IIGLLWFV_					0	0	0			REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8011779785156	2	480.799489	959.584425	0.73477	0.00035328	2.0253	0.00097374	2.76	0.001327	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.84567	1	9951	9951		24.504	0.30126	1	18148000	+		16611	29667	11286	11295	19213	19213					0.1030162818460667
IIGLLWFV	8	Unmodified	_IIGLLWFV_					0	0	0			REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.80084228515625	2	480.799489	959.584425	-1.6775	-0.00080655	4.4374	0.0021335	2.7599	0.0013269	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.88393	1	9686	9686		33.493	6.6969	1	17379000	+		16612	29667	11286	11295	19214	19214					0.1030162818460667
IIGLPIVIIT	10	Unmodified	_IIGLPIVIIT_					0	0	0			REV__ENSG00000023839|ENST00000647814|ABCC2	REV__ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3612060546875	2	526.359911	1050.70527	-1.5923	-0.00083811	3.7176	0.0019568	2.1254	0.0011187	526.3617428180578	33.41	1.543	33.41	33.111	34.654	0					182	44	5	0	0	0	0.86482	1	1814	1814		25.45	1.2474	1	7280900	+		16613	16253	11287	11296	19215	19215					0.1819441110740172
IIGLPIVIIT	10	Unmodified	_IIGLPIVIIT_					0	0	0			REV__ENSG00000023839|ENST00000647814|ABCC2	REV__ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3604736328125	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.84874	1	2374	2374		18.324	0.95945	1	781950	+		16614	16253	11287	11296	19216	19216					0.1819441110740172
IIGLPIVIIT	10	Unmodified	_IIGLPIVIIT_					0	0	0			REV__ENSG00000023839|ENST00000647814|ABCC2	REV__ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.36083984375	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.86482	1	2520	2520		25.45	1.2474	1	2706400	+		16615	16253	11287	11296	19217	19217					0.1819441110740172
IIGLPIVIIT	10	Unmodified	_IIGLPIVIIT_					0	0	0			REV__ENSG00000023839|ENST00000647814|ABCC2	REV__ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.361572265625	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.86482	1	1869	1869		25.45	1.2474	1	1497200	+		16616	16253	11287	11296	19218	19218					0.1819441110740172
IIGLPIVIIT	10	Unmodified	_IIGLPIVIIT_					0	0	0			REV__ENSG00000023839|ENST00000647814|ABCC2	REV__ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.361328125	2	526.359911	1050.70527	1.0713	0.00056389	1.2303	0.0006476	2.3016	0.0012115	526.360423923534	32.788	1.6436	32.999	32.422	34.066	0.21168					152	38	5	0	0	0	0.86201	1	2396	2396		24.203	0	1	7743700	+		16617	16253	11287	11296	19219	19219					0.1819441110740172
IIGLVGNLL	9	Unmodified	_IIGLVGNLL_					0	0	0		ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30078125	2	456.299853	910.585153	-1.7466	-0.00079699	4.271	0.0019489	2.5244	0.0011519	456.30164650413656	48.155	1.4761	48.155	47.668	49.144	0					86	41	3	0	0	0	0.78851	1	3721	3721		28.254	2.8041	1	227150			16618	6501	11288	11297	19220	19220					0.1262842283365444
IIGLVGNLL	9	Unmodified	_IIGLVGNLL_					0	0	0		ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30096435546875	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.58151	1	1991	1991		47.916	1.9636	1	1057300			16619	6501	11288	11297	19221	19221					0.1262842283365444
IIGLVGNLL	9	Unmodified	_IIGLVGNLL_					0	0	0		ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3011779785156	2	456.299853	910.585153	0.15231	6.9501E-05	2.9243	0.0013344	3.0766	0.0014039	456.30102814495837	33.268	1.6065	33.378	33.034	34.64	0.10991					186	70	4	0	0	0	0.7932	1	1601	1601		20.482	3.1169	1	1696300			16620	6501	11288	11297	19222	19222					0.1262842283365444
IIGLVGNLL	9	Unmodified	_IIGLVGNLL_					0	0	0		ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3008728027344	2	456.299853	910.585153	-0.23118	-0.00010549	2.4791	0.0011312	2.2479	0.0010257	456.30086790597977	45.013	2.0189	44.944	43.946	45.965	-0.068634					97	50	2	0	0	0	0.77546	1	3335	3335		31.955	6.5047	1	498520			16621	6501	11288	11297	19223	19223					0.1262842283365444
IIGLVGNLL	9	Unmodified	_IIGLVGNLL_					0	0	0		ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3008117675781	2	456.299853	910.585153	-0.28505	-0.00013007	2.6178	0.0011945	2.3328	0.0010645	456.3009409160632	46.468	1.3803	46.389	45.933	47.313	-0.079002					82	40	3	0	0	0	0.76402	1	3397	3397		35.201	4.6971	1	401880			16622	6501	11288	11297	19224	19224					0.1262842283365444
IIGLVGNLL	9	Unmodified	_IIGLVGNLL_					0	0	0		ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3003234863281	2	456.299853	910.585153	-0.34519	-0.00015751	3.1038	0.0014163	2.7586	0.0012588	456.30112978669194	48.146	1.4143	48.053	47.615	49.029	-0.093178					75	35	3	0	0	0	0.76402	1	3643	3643		35.201	0	1	317120			16623	6501	11288	11297	19225	19225					0.1262842283365444
IIGLVRVIPL	10	Unmodified	_IIGLVRVIPL_					0	0	0		ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8399658203125	2	546.878802	1091.74305	-0.40416	-0.00022103	-4.0835	-0.0022332	-4.4877	-0.0024542	546.8767629300665	101.16	0.40383	101.19	101.09	101.49	0.031036					13	9	2	0	0	0	0.37624	1	10803	10803		31.955	7.7521	1	162000			16624	1543	11289	11298	19226	19226					0.20084922092883062
IIGLVRVIPL	10	Unmodified	_IIGLVRVIPL_					0	0	0		ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.840087890625	2	546.878802	1091.74305	-0.40545	-0.00022173	-4.108	-0.0022466	-4.5134	-0.0024683	546.8755930768676	101.01	0.16331	101.04	100.97	101.13	0.031029					5	3	2	0	0	0	0.37624	1	10779	10779		31.955	14.59	1	48043			16625	1543	11289	11298	19227	19227					0.20084922092883062
IIGLVRVIPL	10	Unmodified	_IIGLVRVIPL_					0	0	0		ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.83984375	2	546.878802	1091.74305	-1.4624	-0.00079974	-0.29572	-0.00016172	-1.7581	-0.00096146	546.8785872609358	100.82	0.16287	101	100.85	101.02	0.172					8	3	3	0	0	0	0.37624	1	10477	10477		31.955	14.59	1	155950			16626	1543	11289	11298	19228	19228					0.20084922092883062
IIGLVRVIPL	10	Unmodified	_IIGLVRVIPL_					0	0	0		ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	546.878802	1091.74305	1.2644	0.00069147	-5.572	-0.0030472	-4.3076	-0.0023558	546.876078290084	100.81	0.44349	100.85	100.73	101.18	0.046356	-0.065215	-0.0029839	NaN	31.955	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85515			16627	1543	11289	11298							0.20084922092883062
IIGMIPPTRE	10	Unmodified	_IIGMIPPTRE_					0	0	0			REV__ENST00000528984.5_1_11:46678586-46685654:+|nuORF	REV__ENST00000528984.5_1_11:46678586-46685654:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	563.8173217773438	2	563.818084	1125.62162	0.35972	0.00020282	-2.4802	-0.0013984	-2.1205	-0.0011956	563.8168428639851	53.745	1.0519	53.792	53.268	54.32	0.047802					46	35	2	0	0	0	0.85694	1	4406	4406		21.96	0	1	151030	+		16628	22052	11290	11299	19229	19229					0.0638293166805397
IIGNLKLP	8	Unmodified	_IIGNLKLP_					0	0	0			REV__nc|ENSG00000171587|O60469-2|DSCAM	REV__nc|ENSG00000171587|O60469-2|DSCAM	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77923583984375	2	434.286746	866.558939	-0.48957	-0.00021261	0.82102	0.00035656	0.33145	0.00014394	434.28683845666495	55.531	0.38289	55.503	55.213	55.596	-0.027275					10	8	2	0	0	0	0.4196	1	5025	5025		26.796	0	1	52902	+		16629	21753	11291	11300	19230	19230					0.12032153662175915
IIGNLKLP	8	Unmodified	_IIGNLKLP_					0	0	0			REV__nc|ENSG00000171587|O60469-2|DSCAM	REV__nc|ENSG00000171587|O60469-2|DSCAM	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77960205078125	2	434.286746	866.558939	0.24036	0.00010439	2.3855	0.001036	2.6258	0.0011404	434.2878077963	45.697	1.3356	45.74	45.323	46.658	0.042599					57	36	2	0	0	0	0.4196	1	3366	3366		35.201	3.2459	1	210860	+		16630	21753	11291	11300	19231	19231					0.12032153662175915
IIGNSAFLLI	10	Unmodified	_IIGNSAFLLI_					0	0	0		ENSG00000112893|ENST00000261483|MAN2A1	ENSG00000112893|ENST00000261483|MAN2A1	ENSG00000112893|ENST00000261483|MAN2A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8206176757812	2	530.823692	1059.63283	-0.88248	-0.00046844	-3.9714	-0.0021081	-4.8539	-0.0025765	530.821384723199	80.761	1.5978	80.761	80.141	81.738	0					159	57	4	0	0	0	0.67608	1	7468	7468		45.952	8.7928	1	2196600			16631	2686	11292	11301	19232	19232					0.10540077033874695
IIGNSAFLLI	10	Unmodified	_IIGNSAFLLI_					0	0	0		ENSG00000112893|ENST00000261483|MAN2A1	ENSG00000112893|ENST00000261483|MAN2A1	ENSG00000112893|ENST00000261483|MAN2A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.82080078125	2	530.823692	1059.63283	-0.07706	-4.0905E-05	-3.7072	-0.0019679	-3.7842	-0.0020088	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.80179	1	7640	7640		39.253	3.6345	1	1032800			16632	2686	11292	11301	19233	19233					0.10540077033874695
IIGPGIVLS	9	Unmodified	_IIGPGIVLS_					0	0	0		nc|ENSG00000171766|P50440-3|GATM;nc|ENSG00000171766|P50440-2|GATM;ENSG00000171766|ENST00000396659|GATM	nc|ENSG00000171766|P50440-3|GATM	nc|ENSG00000171766|P50440-3|GATM	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7607421875	2	434.778754	867.542954	-0.1665	-7.2391E-05	3.0898	0.0013434	2.9233	0.001271	434.7800883249617	86.953	2.4074	87.02	85.642	88.049	0.067444					71	55	2	0	0	0	0.20789	1	8851	8851		25.45	17.76	1	74976			16633	6707	11293	11302	19234	19234					0.10388447425293634
IIGPGIVLS	9	Unmodified	_IIGPGIVLS_					0	0	0		nc|ENSG00000171766|P50440-3|GATM;nc|ENSG00000171766|P50440-2|GATM;ENSG00000171766|ENST00000396659|GATM	nc|ENSG00000171766|P50440-3|GATM	nc|ENSG00000171766|P50440-3|GATM	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.1998	-0.00052165	4.7074	0.0020467	3.5076	0.001525	434.78061172543806	86.734	0.43147	86.734	86.604	87.035	0	-0.079671	0.00051215	NaN	18.324	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38513			16634	6707	11293	11302							0.10388447425293634
IIGPGIVLS	9	Unmodified	_IIGPGIVLS_					0	0	0		nc|ENSG00000171766|P50440-3|GATM;nc|ENSG00000171766|P50440-2|GATM;ENSG00000171766|ENST00000396659|GATM	nc|ENSG00000171766|P50440-3|GATM	nc|ENSG00000171766|P50440-3|GATM	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	434.778754	867.542954	-1.7837	-0.00077552	4.6166	0.0020072	2.8329	0.0012317	434.7807339339446	86.522	2.0109	86.687	85.982	87.993	0.16473	-0.12679	0.00043315	NaN	18.324	72	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62368			16635	6707	11293	11302							0.10388447425293634
IIGPLILST	9	Unmodified	_IIGPLILST_					0	0	0			REV__ENST00000512983.5_1_4:156617950-156632415:+|nuORF	REV__ENST00000512983.5_1_4:156617950-156632415:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.7991027832031	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	3000	3000		24.203	1.1603	1	1231300	+		16636	21035	11294	11303	19235	19235					0.11905003113804469
IIGPLILST	9	Unmodified	_IIGPLILST_					0	0	0			REV__ENST00000512983.5_1_4:156617950-156632415:+|nuORF	REV__ENST00000512983.5_1_4:156617950-156632415:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.8003234863281	2	463.799686	925.584819	-1.0055	-0.00046636	2.8419	0.0013181	1.8363	0.00085169	463.8008639126462	44.569	0.72293	45.032	44.662	45.385	0.46313					32	17	2	0	0	0	0.7932	1	4085	4085		17.365	4.4058	1	773120	+		16637	21035	11294	11303	19236	19236					0.11905003113804469
IIGPLPKT	8	Unmodified	_IIGPLPKT_					0	0	0			REV__ENSG00000125304|ENST00000376387|TM9SF2	REV__ENSG00000125304|ENST00000376387|TM9SF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7749328613281	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.87922	1	3429	3429		31.955	3.7006	1	10965000	+		16638	18633	11295	11304	19237	19237					0.10712464770847419
IIGPPRNFL	9	Unmodified	_IIGPPRNFL_					0	0	0		ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8085327148438	2	513.808377	1025.6022	-1.3833	-0.00071076	2.6514	0.0013623	1.2681	0.00065157	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.7932	1	4230	4230		25.45	1.2474	1	1148600			16639	12667	11296	11305	19238	19238					0.09042343439477918
IIGPPRNFL	9	Unmodified	_IIGPPRNFL_					0	0	0		ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8084106445312	2	513.808377	1025.6022	-1.3056	-0.00067082	2.7011	0.0013878	1.3955	0.00071702	513.8096751801179	57.77	1.4975	57.77	57.038	58.535	0					86	59	2	0	0	0	0.7932	1	5006	5006		20.482	4.0087	1	92374			16640	12667	11296	11305	19239	19239					0.09042343439477918
IIGPPRNFL	9	Unmodified	_IIGPPRNFL_					0	0	0		ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8075561523438	2	513.808377	1025.6022	0.090877	4.6693E-05	1.0576	0.00054341	1.1485	0.00059011	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.76996	1	4361	4361		33.516	5.6333	1	1448700			16641	12667	11296	11305	19240	19240					0.09042343439477918
IIGPPRNFL	9	Unmodified	_IIGPPRNFL_					0	0	0		ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.808349609375	2	513.808377	1025.6022	-0.47161	-0.00024232	1.6041	0.00082419	1.1325	0.00058187	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.69914	1	4123	4123		40.573	7.057	1	1552900			16642	12667	11296	11305	19241	19241					0.09042343439477918
IIGPPRNFL	9	Unmodified	_IIGPPRNFL_					0	0	0		ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8088989257812	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.76996	1	4550	4550		33.516	0	1	771120			16643	12667	11296	11305	19242	19242					0.09042343439477918
IIGPPRNFL	9	Unmodified	_IIGPPRNFL_					0	0	0		ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8095092773438	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.77546	1	4229	4229		31.955	4.0726	1	926440			16644	12667	11296	11305	19243	19243					0.09042343439477918
IIGPPRNFL	9	Unmodified	_IIGPPRNFL_					0	0	0		ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8089599609375	2	513.808377	1025.6022	0.34332	0.0001764	0.75485	0.00038785	1.0982	0.00056425	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.7932	1	3768	3768		25.45	0	1	1306000			16645	12667	11296	11305	19244	19244					0.09042343439477918
IIGPPRNFL	9	Unmodified	_IIGPPRNFL_					0	0	0		ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	ENST00000490289.5_1_20:48711880-48729665:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8081665039062	2	513.808377	1025.6022	-0.15906	-8.1728E-05	1.3381	0.00068753	1.179	0.0006058	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.78058	1	3795	3795		30.504	3.8107	1	1484700			16646	12667	11296	11305	19245	19245					0.09042343439477918
IIGQVIGIV	9	Unmodified	_IIGQVIGIV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30047607421875	2	456.299853	910.585153	-1.7707	-0.00080797	4.1491	0.0018932	2.3784	0.0010852	456.3016315256623	46.489	1.398	46.489	46.06	47.458	0					92	40	3	0	0	0	0.77546	1	3598	3598		31.955	7.4508	1	435240	+		16647	19946	11297	11306	19246	19246					0.1262842283366581
IIGQVIGIV	9	Unmodified	_IIGQVIGIV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.29998779296875	2	456.299853	910.585153	0.11809	5.3885E-05	2.2455	0.0010246	2.3636	0.0010785	456.3007564830729	46.759	1.8735	46.745	45.791	47.665	-0.013821					101	50	3	0	0	0	0.7932	1	3716	3716		16.473	0.83134	1	299420	+		16648	19946	11297	11306	19247	19247					0.1262842283366581
IIGQVIGIV	9	Unmodified	_IIGQVIGIV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3008728027344	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.7932	1	2042	2042		25.45	3.4903	1	1220600	+		16649	19946	11297	11306	19248	19248					0.1262842283366581
IIGQVVHN	8	Unmodified	_IIGQVVHN_					0	0	0		chr5:69625900-70219918|34|41.38|0.0|21.98|-|0|TE_info:HAL1,HAL1_dup7374,L1,LINE,acceptor,-,69625677,69625900|None,GUSBP14|1	chr5:69625900-70219918|34|41.38|0.0|21.98|-|0|TE_info:HAL1,HAL1_dup7374,L1,LINE,acceptor,-,69625677,69625900|None,GUSBP14|1	chr5:69625900-70219918|34|41.38|0.0|21.98|-|0|TE_info:HAL1,HAL1_dup7374,L1,LINE,acceptor,-,69625677,69625900|None,GUSBP14|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.255126953125	2	440.255977	878.497401	0.53622	0.00023607	-2.1619	-0.00095178	-1.6257	-0.0007157	440.25491144919226	78.017	0.54419	78.153	77.907	78.451	0.13667					38	18	3	0	0	0	0.86791	1	7352	7352		28.254	3.7503	1	101180			16650	453	11298	11307	19249	19249					0.05329221962904285
IIGRHLRS	8	Unmodified	_IIGRHLRS_					0	0	0		ENST00000478463.6_1_1:36020007-36020061:-|nuORF	ENST00000478463.6_1_1:36020007-36020061:-|nuORF	ENST00000478463.6_1_1:36020007-36020061:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.2685241699219	2	476.295968	950.577383	0.15557	7.4097E-05	2.8415	0.0013534	2.9971	0.0014275	476.2971248275883	39.355	0.53579	39.325	39.072	39.608	-0.03027					15	12	2	0	0	0	0.4196	1	2699	2699		12.207	3.3845	1	39543			16651	12391	11299	11308	19250	19250					0.10011708356762483
IIGRHLRS	8	Unmodified	_IIGRHLRS_					0	0	0		ENST00000478463.6_1_1:36020007-36020061:-|nuORF	ENST00000478463.6_1_1:36020007-36020061:-|nuORF	ENST00000478463.6_1_1:36020007-36020061:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	476.295968	950.577383	-1.2071	-0.00057493	3.9317	0.0018726	2.7246	0.0012977	476.2975877661142	39.239	0.49507	39.192	38.952	39.447	-0.047005	-0.093886	-0.00015175	NaN	12.207	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54298			16652	12391	11299	11308							0.10011708356762483
IIGRHLRS	8	Unmodified	_IIGRHLRS_					0	0	0		ENST00000478463.6_1_1:36020007-36020061:-|nuORF	ENST00000478463.6_1_1:36020007-36020061:-|nuORF	ENST00000478463.6_1_1:36020007-36020061:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	476.295968	950.577383	-2.5822	-0.0012299	5.9782	0.0028474	3.396	0.0016175	476.298289226274	39.33	0.53759	39.342	38.935	39.472	0.011173	0.055341	0.0017978	NaN	12.207	21	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50485			16653	12391	11299	11308							0.10011708356762483
IIGRKGII	8	Unmodified	_IIGRKGII_					0	0	0			REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3005676269531	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.85787	1	7744	7744		9.4706	0	1	5485100	+		16654	21372	11300	11309	19251	19251					0.14627262273381803
IIGRPVVVK	9	Unmodified	_IIGRPVVVK_					0	0	0		ENST00000503982.1_1_4:147104073-147104202:+|nuORF;ENSG00000164167|ENST00000296581|LSM6	ENST00000503982.1_1_4:147104073-147104202:+|nuORF	ENST00000503982.1_1_4:147104073-147104202:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.832275390625	2	490.834394	979.654236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.875	1	66.001	65.501	66.501	0.12532								0	0	0	0.31088	1	5851	5851		26.796	1.3459	1				16655	5930	11301	11310	19252	19252					0.16359506853234507
IIGSLPLSI	9	Unmodified	_IIGSLPLSI_					0	0	0			REV__ENST00000481996.1_1_6:74344990-74351530:-|nuORF	REV__ENST00000481996.1_1_6:74344990-74351530:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7917175292969	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.72402	1	2940	2940		38.806	1.647	1	759950	+		16656	18382	11302	11311	19253	19253					0.10984716596760791
IIGSLPLSI	9	Unmodified	_IIGSLPLSI_					0	0	0			REV__ENST00000481996.1_1_6:74344990-74351530:-|nuORF	REV__ENST00000481996.1_1_6:74344990-74351530:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7921447753906	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.7932	1	3278	3278		24.203	0	1	652510	+		16657	18382	11302	11311	19254	19254					0.10984716596760791
IIGSLPVGG	9	Unmodified	_IIGSLPVGG_					0	0	0			REV__ENSG00000170923|ENST00000641081|OR7G2	REV__ENSG00000170923|ENST00000641081|OR7G2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.749267578125	2	406.747453	811.480354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.15	1	118.12	117.62	118.62	-0.024208								0	0	0	0.32894	1	13085	13085		20.482	0	1		+		16658	21699	11303	11312	19255	19255					0.06707301357096185
IIGSQGRLTG	10	Unmodified	_IIGSQGRLTG_					0	0	0			REV__ENSG00000121904|ENST00000373381|CSMD2	REV__ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29058837890625	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.86348	1	8629	8629		31.53	0	1	9566900	+		16659	18472	11304	11313	19256	19256					0.06628261191804086
IIGTEPVL	8	Unmodified	_IIGTEPVL_					0	0	0			REV__ENSG00000139304|ENST00000644991|PTPRQ	REV__ENSG00000139304|ENST00000644991|PTPRQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.25433349609375	2	421.255111	840.49567	0.67687	0.00028514	-3.3489	-0.0014107	-2.672	-0.0011256	421.25351698068755	84.328	1.4775	84.259	83.718	85.196	-0.069313					81	33	3	0	0	0	0.89457	1	8593	8593		37.028	1.8278	1	949480	+		16660	19532	11305	11314	19257	19257					0.06904168154278523
IIGVGKAIAK	10	Unmodified	_IIGVGKAIAK_					0	0	0			REV__ENST00000472488.5_1_1:160085570-160106822:+|nuORF;REV__nc|ENSG00000163399|P05023-3|ATP1A1;REV__ENSG00000132681|ENST00000368081|ATP1A4	REV__nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.28143310546875	2	485.326402	968.638252	-0.2899	-0.0001407	-0.49753	-0.00024146	-0.78743	-0.00038216	485.3260503184542	31.955	0.38559	32.081	31.86	32.246	0.12643					12	8	2	0	0	0	0.37624	1	2171	2171		25.574	0	1	70995	+		16661	27261;20912;19021	11306	11315	19258	19258					0.15267800616322802
IIGVGKAIAK	10	Unmodified	_IIGVGKAIAK_					0	0	0			REV__ENST00000472488.5_1_1:160085570-160106822:+|nuORF;REV__nc|ENSG00000163399|P05023-3|ATP1A1;REV__ENSG00000132681|ENST00000368081|ATP1A4	REV__nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	485.326402	968.638252	0.31037	0.00015063	-0.81969	-0.00039782	-0.50932	-0.00024719	485.32589044900476	31.877	0.34354	31.984	31.802	32.146	0.10707	-0.048487	-0.00020982	NaN	25.574	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62887	+		16662	27261;20912;19021	11306	11315							0.15267800616322802
IIGVIILSE	9	Unmodified	_IIGVIILSE_					0	0	0		ENSG00000204764|ENST00000523189|RANBP17;ENST00000523727.1_1_5:170308890-170323149:+|nuORF;ENST00000519130.5_1_5:170289037-170336799:+|nuORF;nc|ENSG00000204764|Q9H2T7-2|RANBP17;ENST00000443155.5_1_5:170288887-170338173:+|nuORF	ENSG00000204764|ENST00000523189|RANBP17;ENST00000443155.5_1_5:170288887-170338173:+|nuORF	ENSG00000204764|ENST00000523189|RANBP17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80560302734375	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.7932	1	2645	2645		25.45	0	1	371600			16663	8486;11801	11307	11316	19259	19259					0.11580985768250684
IIGVPIQV	8	Unmodified	_IIGVPIQV_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.93865966796875	2	419.773471	837.53239	0.26515	0.0001113	4.2105	0.0017675	4.4757	0.0018788	419.7748900327774	48.621	1.0597	48.659	48.328	49.387	0.037731					37	25	2	0	0	0	0.4196	1	3800	3800		4.6817	0	1	57782	+		16664	20899	11308	11317	19260	19260					0.10712464770858787
IIGVPKRQLH	10	Unmodified	_IIGVPKRQLH_					0	0	0			REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|83|2|sense	REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|83|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.4148559570312	2	580.866757	1159.71896	-1.9254	-0.0011184	0.2127	0.00012355	-1.7127	-0.00099487	580.8669359597059	61.42	0.67959	61.808	61.504	62.184	0.38846					28	17	2	0	0	0	0.37624	1	6530	6530		29.15	11.785	1	222470	+		16665	29622	11309	11318	19261	19261					0.14549081659242802
IIGVVMNYII	10	Unmodified	_IIGVVMNYII_					0	0	0			REV__ENSG00000260903|ENST00000562532|XKR7	REV__ENSG00000260903|ENST00000562532|XKR7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3305053710938	2	567.833203	1133.65185	-0.53658	-0.00030469	-2.3749	-0.0013485	-2.9114	-0.0016532	567.8318999400751	89.416	1.2987	89.887	88.916	90.214	0.47068					66	31	3	0	0	0	0.37624	1	10555	10555		31.955	7.7521	1	775910	+		16666	23939	11310	11319	19262	19262					0.09037290333253623
IIGYYYPAPD	10	Unmodified	_IIGYYYPAPD_					0	0	0		chr1:172165703-172253573|43|47.35|0.13|8.5|+|2|TE_info:L2c,L2c_dup10988,L2,LINE,donor,+,172165410,172165703|None,DNM3|3	chr1:172165703-172253573|43|47.35|0.13|8.5|+|2|TE_info:L2c,L2c_dup10988,L2,LINE,donor,+,172165410,172165703|None,DNM3|3	chr1:172165703-172253573|43|47.35|0.13|8.5|+|2|TE_info:L2c,L2c_dup10988,L2,LINE,donor,+,172165410,172165703|None,DNM3|3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.3262939453125	2	586.28714	1170.55973	-0.64473	-0.000378	1.9423	0.0011388	1.2976	0.00076076	586.2871949457109	59.549	0.28002	60.102	59.919	60.199	0.55323					8	6	2	0	0	0	0.37624	1	6293	6293		25.45	4.5032	1	209160			16667	30	11311	11320	19263	19263					-0.01873096479448577
IIHCLNGG	8	Unmodified	_IIHCLNGG_					0	0	0		nc|ENSG00000152894|Q15262|PTPRK;ENSG00000152894|ENST00000368226|PTPRK;nc|ENSG00000152894|Q15262-3|PTPRK;nc|ENSG00000152894|Q15262-4|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.23809814453125	2	413.71563	825.416708	-0.12137	-5.0211E-05	2.1232	0.00087841	2.0018	0.00082819	413.71757212449853	77.47	0.2023	77.419	77.283	77.485	-0.050789					18	8	3	0	0	0	0.4196	1	7691	7691		26.796	6.3143	1	69793			16668	5202	11312	11321	19264	19264					-0.002983823516501616
IIHCLNGG	8	Unmodified	_IIHCLNGG_					0	0	0		nc|ENSG00000152894|Q15262|PTPRK;ENSG00000152894|ENST00000368226|PTPRK;nc|ENSG00000152894|Q15262-3|PTPRK;nc|ENSG00000152894|Q15262-4|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2380676269531	2	413.71563	825.416708	2.4277	0.0010044	1.7551	0.00072611	4.1828	0.0017305	413.7166685795572	77.575	1.434	77.624	77.179	78.613	0.04969					88	55	2	0	0	0	0.4196	1	7609	7609		26.796	6.3143	1	68501			16669	5202	11312	11321	19265	19265					-0.002983823516501616
IIHFIEMLKKR	11	Unmodified	_IIHFIEMLKKR_					0	0	0			REV__ENST00000472433.5_1_22:30184624-30209474:-|nuORF	REV__ENST00000472433.5_1_22:30184624-30209474:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62432861328125	3	476.623364	1426.84826	-1.6911	-0.000806	2.4072	0.0011473	0.71614	0.00034133	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.80813	2	12863	12863;12874		9.6461	2.0864	1	2577100	+		16670	17170	11313	11322	19266;19267	19266					0.15191095226964535
IIHIGEKPCK	10	Unmodified	_IIHIGEKPCK_					0	0	0		ENST00000600110.1_1_19:23779328-23779892:+|nuORF	ENST00000600110.1_1_19:23779328-23779892:+|nuORF	ENST00000600110.1_1_19:23779328-23779892:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.2289428710938	2	569.326076	1136.6376	-1.5481	-0.00088139	0.97739	0.00055645	-0.57074	-0.00032494	569.3267441075908	42.385	0.60556	42.818	42.565	43.17	0.4334					22	14	2	0	0	0	0.37624	1	3784	3784		27.882	4.3595	1	145680			16671	14378	11314	11323	19268	19268					0.07474637904965675
IIHIIATLLL	10	Unmodified	_IIHIIATLLL_					0	0	0		ENST00000525065.1_1_11:117062460-117063438:+|nuORF;ENST00000529484.5_1_11:117061404-117064733:+|nuORF;ENSG00000149577|ENST00000324225|SIDT2;nc|ENSG00000149577|Q8NBJ9-2|SIDT2	ENST00000525065.1_1_11:117062460-117063438:+|nuORF	ENST00000525065.1_1_11:117062460-117063438:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.340087890625	2	560.378635	1118.74272	3.1377	0.0017583	-3.011	-0.0016873	0.12673	7.1014E-05	560.3770854832517	102.29	0.7325	102.24	102.01	102.74	-0.047005					29	17	3	0	0	0	0.37624	1	11211	11211		17.365	5.8539	1	632190			16672	5038	11315	11324	19269	19269					0.18809502373028408
IIHIIATLLL	10	Unmodified	_IIHIIATLLL_					0	0	0		ENST00000525065.1_1_11:117062460-117063438:+|nuORF;ENST00000529484.5_1_11:117061404-117064733:+|nuORF;ENSG00000149577|ENST00000324225|SIDT2;nc|ENSG00000149577|Q8NBJ9-2|SIDT2	ENST00000525065.1_1_11:117062460-117063438:+|nuORF	ENST00000525065.1_1_11:117062460-117063438:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.34033203125	2	560.378635	1118.74272	-1.4185	-0.00079487	-2.0245	-0.0011345	-3.443	-0.0019294	560.3777883732294	102.73	0.37039	102.87	102.53	102.9	0.1357					15	8	2	0	0	0	0.37624	1	10759	10759		12.207	5.0135	1	96108			16673	5038	11315	11324	19270	19270					0.18809502373028408
IIHLHSLPP	9	Unmodified	_IIHLHSLPP_					0	0	0		ENST00000280800.4_1_12:113827312-113827528:+|nuORF	ENST00000280800.4_1_12:113827312-113827528:+|nuORF	ENST00000280800.4_1_12:113827312-113827528:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3171997070312	2	513.808377	1025.6022	-0.37612	-0.00019325	2.4565	0.0012622	2.0804	0.0010689	514.3113998928691	55.226	0.87582	55.29	54.941	55.817	0.063725					33	27	2	0	0	0	0.20789	1	4608	4608		33.516	0	1	104200			16674	9624	11316	11325	19271	19271					0.09042343439477918
IIHLHSLPP	9	Unmodified	_IIHLHSLPP_					0	0	0		ENST00000280800.4_1_12:113827312-113827528:+|nuORF	ENST00000280800.4_1_12:113827312-113827528:+|nuORF	ENST00000280800.4_1_12:113827312-113827528:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8094482421875	2	513.808377	1025.6022	0.37872	0.00019459	0.75131	0.00038603	1.13	0.00058062	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.7932	2	4130	4130;4172		25.45	0.94616	1	971720			16675	9624	11316	11325	19272;19273	19272					0.09042343439477918
IIHLHSLPP	9	Unmodified	_IIHLHSLPP_					0	0	0		ENST00000280800.4_1_12:113827312-113827528:+|nuORF	ENST00000280800.4_1_12:113827312-113827528:+|nuORF	ENST00000280800.4_1_12:113827312-113827528:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8088989257812	2	513.808377	1025.6022	-0.30203	-0.00015519	1.5478	0.00079525	1.2457	0.00064007	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.7932	1	4168	4168		25.45	6.0902	1	861580			16676	9624	11316	11325	19274	19274					0.09042343439477918
IIHPGAML	8	Unmodified	_IIHPGAML_					0	0	0		ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3	ENSG00000163625|ENST00000295888|WDFY3	ENSG00000163625|ENST00000295888|WDFY3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.24560546875	2	426.244024	850.473494	1.0559	0.00045007	3.7099	0.0015813	4.7658	0.0020314	426.2455229557475	87.647	3.9379	87.573	85.625	89.563	-0.074005					153	92	2	0	0	0	0.88393	1	9032	9032		33.493	5.2387	1	4306400			16677	5839	11317	11326	19275	19275					0.04227665204859932
IIHQRKHTG	9	Unmodified	_IIHQRKHTG_					0	0	0		nc|ENSG00000175395|P17030-2|ZNF25;ENSG00000175395|ENST00000302609|ZNF25	nc|ENSG00000175395|P17030-2|ZNF25	nc|ENSG00000175395|P17030-2|ZNF25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3165283203125	2	545.317432	1088.62031	0.15577	8.4944E-05	-1.2744	-0.00069494	-1.1186	-0.00060999	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.74721	1	8938	8938		37.159	2.9866	1	17220000			16678	7014	11318	11327	19276	19276					0.07954478414171717
IIHVFNIPKRF	11	Unmodified	_IIHVFNIPKRF_					0	0	0			REV__ENST00000397708.1_1_21:47705189-47706155:-|nuORF	REV__ENST00000397708.1_1_21:47705189-47706155:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.9486389160156	3	461.946835	1382.81868	2.7802	0.0012843	-0.05863	-2.7084E-05	2.7216	0.0012572	461.9467411466651	107.89	0.36398	107.86	107.55	107.92	-0.031487					28	8	4	0	0	0	0.76579	1	11954	11954		18.531	0	1	78237000	+		16679	26175	11319	11328	19277	19277					0.1425789927313872
IIHVFNIPKRF	11	Unmodified	_IIHVFNIPKRF_					0	0	0			REV__ENST00000397708.1_1_21:47705189-47706155:-|nuORF	REV__ENST00000397708.1_1_21:47705189-47706155:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.9485778808594	3	461.946835	1382.81868	-1.0613	-0.00049026	3.4138	0.001577	2.3525	0.0010867	461.94836376630775	107.84	0.21313	107.98	107.81	108.03	0.13866					10	5	2	0	0	0	0.74022	1	11593	11593		24.232	0.85391	1	146310000	+		16680	26175	11319	11328	19278	19278					0.1425789927313872
IIHVGEKPY	9	Unmodified	_IIHVGEKPY_					0	0	0		ENST00000429248.1_1_7:56706781-56707144:-|nuORF	ENST00000429248.1_1_7:56706781-56707144:-|nuORF	ENST00000429248.1_1_7:56706781-56707144:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.2732543945312	2	528.297842	1054.58113	0.47348	0.00025014	-1.6754	-0.00088509	-1.2019	-0.00063496	528.2970111673661	75.365	0.54523	75.76	75.532	76.077	0.39507					19	12	2	0	0	0	0.20789	1	8494	8494		20.947	0	1	113530			16681	11605	11320	11329	19279	19279					0.05602333339948018
IIIAGLLTDSG	11	Unmodified	_IIIAGLLTDSG_					0	0	0			REV__nc|ENSG00000107186|O75970-5|MPDZ	REV__nc|ENSG00000107186|O75970-5|MPDZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.8131713867188	2	536.816064	1071.61758	-0.797	-0.00042784	-3.039	-0.0016314	-3.836	-0.0020592	536.814366921359	60.785	0.72009	61.338	61.037	61.757	0.55323					38	22	2	0	0	0	0.72228	1	6484	6484		27.882	0	1	4216700	+		16682	17649	11321	11330	19280	19280					0.08463165445982668
IIIDTIKLDR	10	Unmodified	_IIIDTIKLDR_					0	0	0			REV__nc|ENSG00000133026|P35580|MYH10	REV__nc|ENSG00000133026|P35580|MYH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5843505859375	3	400.583451	1198.72852	2.8195	0.0011294	-1.4347	-0.00057471	1.3848	0.00055472	400.58284711593865	24.711	0.82143	24.674	24.297	25.118	-0.037178					47	17	3	0	0	0	0.86621	1	923	923		26.063	2.5407	1	68143	+		16683	19050	11322	11331	19281	19281					0.1371080515407357
IIIEELPIY	9	Unmodified	_IIIEELPIY_					0	0	0		nc|ENSG00000164932|Q96CG8-2|CTHRC1	nc|ENSG00000164932|Q96CG8-2|CTHRC1	nc|ENSG00000164932|Q96CG8-2|CTHRC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.823974609375	2	551.823358	1101.63216	-0.10454	-5.7687E-05	-0.61782	-0.00034093	-0.72236	-0.00039861	551.8224232933234	87.561	1.082	88.007	87.431	88.513	0.44629					42	25	3	0	0	0	0.5393	1	10288	10288		50.025	2.1089	1	671100			16684	15065	11323	11332	19282	19282					0.08541237594158702
IIIEELPIY	9	Unmodified	_IIIEELPIY_					0	0	0		nc|ENSG00000164932|Q96CG8-2|CTHRC1	nc|ENSG00000164932|Q96CG8-2|CTHRC1	nc|ENSG00000164932|Q96CG8-2|CTHRC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.82373046875	2	551.823358	1101.63216	-1.0386	-0.00057313	0.96629	0.00053322	-0.072319	-3.9907E-05	551.8236522476549	87.647	0.8783	88.11	87.517	88.396	0.46312					42	20	3	0	0	0	0.58151	1	10340	10340		47.916	1.9636	1	705370			16685	15065	11323	11332	19283	19283					0.08541237594158702
IIIFEQIR	8	Unmodified	_IIIFEQIR_					0	0	0		nc|ENSG00000057252|P35610-3|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;ENSG00000057252|ENST00000367619|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3140869140625	2	516.316035	1030.61752	-0.63969	-0.00033028	-3.0425	-0.0015709	-3.6822	-0.0019012	516.3144152653146	102.55	1.0925	102.55	101.98	103.08	0					67	27	3	0	0	0	0.89457	1	10479	10479		37.028	3.5129	1	640710			16686	1036	11324	11333	19284	19284					0.10343210236646883
IIIGFLRRYT	10	Unmodified	_IIIGFLRRYT_					0	0	0		ENSG00000233232|ENST00000452313|NPIPB7;ENSG00000198156|ENST00000695563|NPIPB6;ENSG00000196993|ENST00000357796|NPIPB9	ENSG00000233232|ENST00000452313|NPIPB7	ENSG00000233232|ENST00000452313|NPIPB7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.38037109375	2	626.38224	1250.74993	-1.2034	-0.00075376	-2.9346	-0.0018382	-4.138	-0.002592	626.3802975335307	105.63	2.6046	105.7	104.93	107.53	0.073112					329	63	6	0	0	0	0.86589	1	11441	11441		29.15	1.0681	1	74722000			16687	8120	11325	11334	19285	19285					0.1345823497345009
IIIHILILELY	11	Unmodified	_IIIHILILELY_					0	0	0		ENST00000480380.1_1_1:19547455-19547737:-|nuORF	ENST00000480380.1_1_1:19547455-19547737:-|nuORF	ENST00000480380.1_1_1:19547455-19547737:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.96124267578125	3	451.623246	1351.84791	0.25395	0.00011469	2.3747	0.0010725	2.6286	0.0011872	451.62419829630386	45.115	0.78364	45.164	44.861	45.645	0.048996					33	18	2	0	0	0	0.17811	1	3229	3229		14.694	0.60766	1	93515			16688	12433	11326	11335	19286	19286					0.1860599877882123
IIIHLEKRSL	10	Unmodified	_IIIHLEKRSL_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3557739257812	2	611.387522	1220.76049	-0.40679	-0.00024871	-0.77856	-0.000476	-1.1853	-0.00072471	611.3877181861609	95.996	0.25613	96.062	95.88	96.136	0.06591					7	5	2	0	0	0	0.37624	1	10065	10065		12.812	0	1	43087			16689	3805	11327	11336	19287	19287					0.15894217627896978
IIIHLEKRSL	10	Unmodified	_IIIHLEKRSL_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3592529296875	2	611.387522	1220.76049	-0.40739	-0.00024907	-1.5366	-0.00093945	-1.944	-0.0011885	611.3868167553157	96.809	0.21288	96.871	96.737	96.95	0.062233					5	4	2	0	0	0	0.37624	1	10185	10185		5.2201	0	1	65331			16690	3805	11327	11336	19288	19288					0.15894217627896978
IIIHSLKKCDI	11	Unmodified	_IIIHSLKKCDI_					0	0	0		ENSG00000079246|ENST00000392132|XRCC5	ENSG00000079246|ENST00000392132|XRCC5	ENSG00000079246|ENST00000392132|XRCC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8824462890625	2	641.881216	1281.74788	1.5974	0.0010254	0.28164	0.00018078	1.8791	0.0012061	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.69995	1	10102	10102		31.53	2.3598	1	4266200			16691	1412	11328	11337	19289	19289					0.11827438173372684
IIIIIIIYYNY	11	Unmodified	_IIIIIIIYYNY_					0	0	0			REV__ENST00000464356.6_2_1:156437035-156437317:-|nuORF	REV__ENST00000464356.6_2_1:156437035-156437317:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.29290771484375	3	471.951252	1412.83193	1.9135	0.00090307	-0.92796	-0.00043795	0.98553	0.00046512	471.9508421580416	105.92	0.88506	106.04	105.62	106.5	0.12742					62	30	3	0	0	0	0.80361	1	12911	12911		10.587	0	1	247190	+		16692	27092	11329	11338	19290	19290					0.1420229254190417
IIIKAPPIF	9	Unmodified	_IIIKAPPIF_					0	0	0			REV__ENSG00000214866|ENST00000399143|DCDC2C	REV__ENSG00000214866|ENST00000399143|DCDC2C	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.30926513671875	2	506.333696	1010.65284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.39	1	112.49	111.99	112.99	0.10638								0	0	0	0.35623	1	12111	12111		12.959	0.75233	1		+		16693	23666	11330	11339	19291	19291					0.14793872764471416
IIIKLFTLCVF	11	Unmodified	_IIIKLFTLCVF_					0	0	0			REV__ENST00000508157.3_1_5:70790975-70807035:+|nuORF	REV__ENST00000508157.3_1_5:70790975-70807035:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2676086425781	3	437.269927	1308.78795	-1.6775	-0.00073351	-3.1272	-0.0013674	-4.8047	-0.0021009	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.74771	1	4453	4453		22.562	7.8679	1	2305800	+		16694	27917	11331	11340	19292	19292					0.14590984843903243
IIIKLFTLCVF	11	Unmodified	_IIIKLFTLCVF_					0	0	0			REV__ENST00000508157.3_1_5:70790975-70807035:+|nuORF	REV__ENST00000508157.3_1_5:70790975-70807035:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2677307128906	3	437.269927	1308.78795	-0.68964	-0.00030156	-4.1863	-0.0018305	-4.8759	-0.0021321	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.76892	1	4785	4785		17.833	1.3033	1	2651700	+		16695	27917	11331	11340	19293	19293					0.14590984843903243
IIIKLFTLCVF	11	Unmodified	_IIIKLFTLCVF_					0	0	0			REV__ENST00000508157.3_1_5:70790975-70807035:+|nuORF	REV__ENST00000508157.3_1_5:70790975-70807035:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26763916015625	3	437.269927	1308.78795	-1.5693	-0.00068621	-3.3052	-0.0014453	-4.8745	-0.0021315	437.2683683670783	53.718	2.085	53.765	52.872	54.957	0.047806					225	71	5	0	0	0	0.74405	1	4372	4372		23.378	9.1347	1	2544700	+		16696	27917	11331	11340	19294	19294					0.14590984843903243
IIIKLFTLCVF	11	Unmodified	_IIIKLFTLCVF_					0	0	0			REV__ENST00000508157.3_1_5:70790975-70807035:+|nuORF	REV__ENST00000508157.3_1_5:70790975-70807035:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2677001953125	3	437.269927	1308.78795	-0.53561	-0.00023421	-4.0982	-0.001792	-4.6338	-0.0020262	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.72374	2	4220	4179;4220		27.644	1.5805	1	4132000	+		16697	27917	11331	11340	19295;19296	19296					0.14590984843903243
IIILKKRYSI	10	Unmodified	_IIILKKRYSI_					0	0	0		nc|ENSG00000205060|Q969S0-2|SLC35B4;nc|ENSG00000205060|Q969S0-3|SLC35B4;ENSG00000205060|ENST00000378509|SLC35B4	nc|ENSG00000205060|Q969S0-2|SLC35B4	nc|ENSG00000205060|Q969S0-2|SLC35B4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.7236938476562	2	623.915916	1245.81728	1.3363	0.00083373	0.19021	0.00011867	1.5265	0.0009524	624.4177765430787	112.19	0.22365	112.3	112.26	112.48	0.10638					10	8	2	0	0	0	0.37624	1	12096	12096		10.866	4.5529	1	269840			16698	8509	11332	11341	19297	19297					0.2042026518442981
IIILLPLFFVF	11	Unmodified	_IIILLPLFFVF_					0	0	0			REV__ENSG00000122375|ENST00000241891|OPN4	REV__ENSG00000122375|ENST00000241891|OPN4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.6358642578125	3	445.621066	1333.84137	-0.070753	-3.1529E-05	1.9152	0.00085347	1.8445	0.00082194	445.6233868406971	36.831	0.44921	37.112	36.767	37.216	0.28173					14	10	2	0	0	0	0.17754	1	2888	2888		27.047	21.905	1	74569	+		16699	18491	11333	11342	19298	19298					0.18780105618066045
IIILRKGG	8	Unmodified	_IIILRKGG_					0	0	0			REV__nc|ENSG00000148690|Q70Z53-3|FRA10AC1	REV__nc|ENSG00000148690|Q70Z53-3|FRA10AC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2995300292969	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.85787	1	6825	6825		9.4706	0	1	1921500	+		16700	29924	11334	11343	19299	19299					0.14627262273370434
IIIMLEFIA	9	Unmodified	_IIIMLEFIA_					0	0	0		ENST00000487557.2_1_9:5335253-5339295:-|nuORF;ENSG00000107018|ENST00000223862|RLN1	ENST00000487557.2_1_9:5335253-5339295:-|nuORF	ENST00000487557.2_1_9:5335253-5339295:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8167724609375	2	531.817021	1061.61949	-1.5109	-0.00080353	1.1746	0.00062469	-0.33628	-0.00017884	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.7932	1	8604	8604		25.45	0	1	4022300			16701	2327	11335	11344	19300	19300					0.09114502930265189
IIITQRQKD	9	Unmodified	_IIITQRQKD_					0	0	0			REV__nc|ENSG00000110422|Q9H422-2|HIPK3	REV__nc|ENSG00000110422|Q9H422-2|HIPK3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.8273315429688	2	557.83258	1113.65061	-0.43888	-0.00024482	-2.64	-0.0014727	-3.0789	-0.0017175	557.8312098012074	101.3	1.4308	101.3	100.82	102.25	0					75	34	3	0	0	0	0.77244	1	10345	10345		32.812	9.7699	1	522930	+		16702	17811	11336	11345	19301	19301					0.09832792288693781
IIKAKEWN	8	Unmodified	_IIKAKEWN_					0	0	0		ENSG00000163492|ENST00000443758|CCDC141;nc|ENSG00000163492|Q6ZP82-1|CCDC141	ENSG00000163492|ENST00000443758|CCDC141	ENSG00000163492|ENST00000443758|CCDC141	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.29034423828125	2	501.292559	1000.57057	-1.4828	-0.00074334	-2.8745	-0.001441	-4.3573	-0.0021843	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.87064	1	8146	8146		29.15	0.89528	1	2793500			16703	5807	11337	11346	19302	19302					0.07030350685511166
IIKCISLSK	9	Unmodified	_IIKCISLSK_					0	0	0		ENST00000507334.1_1_4:144359455-144361094:+|nuORF	ENST00000507334.1_1_4:144359455-144361094:+|nuORF	ENST00000507334.1_1_4:144359455-144361094:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	502.81365966796875	2	502.81227	1003.60999	-0.46142	-0.00023201	3.207	0.0016125	2.7456	0.0013805	502.81389715137584	97.081	3.6095	97.312	96.652	100.26	0.23103					270	84	6	0	0	0	0.7932	1	10036	10036		21.96	0.25755	1	29832000			16704	12954	11338	11347	19303	19303					0.10832734644736774
IIKDNISSRY	10	Unmodified	_IIKDNISSRY_					0	0	0			REV__ENST00000470247.1_1_17:17721556-17722545:-|nuORF	REV__ENST00000470247.1_1_17:17721556-17722545:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.5614013671875	3	403.559305	1207.65609	2.8514	0.0011507	-1.0389	-0.00041924	1.8125	0.00073146	403.5587881215693	22.775	1.0826	22.725	22.354	23.437	-0.050077					94	41	3	0	0	0	0.86698	1	690	690		28.081	2.0181	1	140620	+		16705	16643	11339	11348	19304	19304					0.060564710805238064
IIKDTNPSY	9	Unmodified	_IIKDTNPSY_					0	0	0			REV__ENSG00000167825|ENST00000301532|OR5I1	REV__ENSG00000167825|ENST00000301532|OR5I1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7771606445312	2	525.776939	1049.53933	-0.31827	-0.00016734	-0.53621	-0.00028192	-0.85447	-0.00044926	525.7765127703135	60.53	0.77576	60.919	60.444	61.219	0.38945					28	15	2	0	0	0	0.44421	1	6414	6414		54.776	5.2403	1	1140900	+		16706	21430	11340	11349	19305	19305					0.016537328607682866
IIKDTNPSY	9	Unmodified	_IIKDTNPSY_					0	0	0			REV__ENSG00000167825|ENST00000301532|OR5I1	REV__ENSG00000167825|ENST00000301532|OR5I1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7778930664062	2	525.776939	1049.53933	-0.31107	-0.00016355	-0.62568	-0.00032897	-0.93675	-0.00049252	525.7764421050882	60.483	0.82246	61.036	60.502	61.325	0.55323					32	17	2	0	0	0	0.55097	1	6436	6436		49.442	3.4896	1	829740	+		16707	21430	11340	11349	19306	19306					0.016537328607682866
IIKEDDYQ	8	Unmodified	_IIKEDDYQ_					0	0	0			REV__nc|ENSG00000072803|Q9UKB1-2|FBXW11	REV__nc|ENSG00000072803|Q9UKB1-2|FBXW11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.2536010742188	2	512.253297	1022.49204	0.39694	0.00020333	0.71007	0.00036373	1.107	0.00056707	512.2534945513374	54.386	1.4462	54.467	54.003	55.449	0.081524					65	38	3	0	0	0	0.90465	1	4532	4532		40.573	4.9543	1	633090	+		16708	16657	11341	11350	19307	19307					-0.01830546410246825
IIKEINKHEY	10	Unmodified	_IIKEINKHEY_					0	0	0			REV__nc|ENSG00000147124|P51814-4|ZNF41	REV__nc|ENSG00000147124|P51814-4|ZNF41	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.8642578125	2	643.858795	1285.70304	2.6702	0.0017192	3.0547	0.0019668	5.7249	0.003686	643.8630992224071	112.19	0.52987	112.17	112.07	112.6	-0.025414					31	11	3	0	0	0	0.37624	1	12425	12425		36.447	13.867	1	2769700	+		16709	20052	11342	11351	19308	19308					0.071613306316749
IIKEINKHEY	10	Unmodified	_IIKEINKHEY_					0	0	0			REV__nc|ENSG00000147124|P51814-4|ZNF41	REV__nc|ENSG00000147124|P51814-4|ZNF41	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	643.858795	1285.70304	2.0658	0.0013301	5.4699	0.0035219	7.5357	0.0048519	643.8634818362838	112.22	2.0062	112.25	111.94	113.95	0.030602	0.043324	0.0010084	NaN	36.447	173	83	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2764200	+		16710	20052	11342	11351							0.071613306316749
IIKFFNGTSLK	11	Unmodified	_IIKFFNGTSLK_					0	0	0		nc|ENSG00000141258|O43147-5|SGSM2	nc|ENSG00000141258|O43147-5|SGSM2	nc|ENSG00000141258|O43147-5|SGSM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.376708984375	2	634.374081	1266.73361	1.3188	0.00083664	3.8961	0.0024716	5.215	0.0033083	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.72918	1	12508	12508		26.693	2.1737	1	12917000			16711	14963	11343	11352	19309	19309					0.11091109016706469
IIKFFRSMIV	10	Unmodified	_IIKFFRSMIV_					0	0	0			REV__ENST00000511235.1_1_5:134303666-134331399:+|nuORF	REV__ENST00000511235.1_1_5:134303666-134331399:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3832397460938	2	627.375569	1252.73659	6.5825	0.0041297	3.8659	0.0024254	10.448	0.006555	627.3778931643454	110.88	0.7373	110.93	110.56	111.3	0.049095					56	30	2	0	0	0	0.8651	1	13496	13496		25.574	3.6142	1	362180	+		16712	20313	11344	11353	19310	19310					0.12032660869863321
IIKGKSFIMVF	11	Unmodified	_IIKGKSFIMVF_					0	0	0		MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|1|1|sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|1|1|sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8828735351562	2	641.883227	1281.7519	-0.050098	-3.2157E-05	-1.112	-0.0007138	-1.1621	-0.00074596	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.6921	2	10217	10217;10469		32.812	1.2826	1	3644700			16713	14708	11345	11354	19311;19312	19311					0.12229527667022921
IIKIQRWY	8	Unmodified	_IIKIQRWY_					0	0	0		ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.341064453125	2	560.337301	1118.66005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.92	1	104.19	103.69	104.69	0.26524								0	0	0	0.30928	1	12687	12687		46.766	2.6496	1				16714	1155	11346	11355	19313	19313					0.10546605364879724
IIKLAFEKGT	10	Unmodified	_IIKLAFEKGT_					0	0	0			REV__nc|ENSG00000170390|Q8N568-2|DCLK2	REV__nc|ENSG00000170390|Q8N568-2|DCLK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.33984375	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.86272	1	12540	12540		24.519	7.0512	1	4071000	+		16715	21656	11347	11356	19314	19314					0.11535748579603933
IIKLFLFFSP	10	Unmodified	_IIKLFLFFSP_					0	0	0			REV__ENST00000377142.4_1_20:21494349-21494634:-|nuORF	REV__ENST00000377142.4_1_20:21494349-21494634:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.93359375	3	408.917882	1223.73182	0.012694	5.1906E-06	4.0427	0.0016531	4.0554	0.0016583	408.91929190952874	16.37	0.12288	16.429	16.38	16.503	0.059269					6	5	2	0	0	0	0.37624	1	136	136		35.152	17.319	1	21112	+		16716	25858	11348	11357	19315	19315					0.12890099998730875
IIKLGSKSEKN	11	Unmodified	_IIKLGSKSEKN_					0	0	0			REV__ENSG00000115423|ENST00000389394|DNAH6	REV__ENSG00000115423|ENST00000389394|DNAH6	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24871826171875	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.237	1	19.162	18.662	19.662	-0.074974								0	0	0	0.56276	1	401	401		18.531	2.0012	1		+		16717	18120	11349	11358	19316	19316					0.11945617148717247
IIKMGGLSSL	10	Unmodified	_IIKMGGLSSL_					0	0	0		ENST00000330374.6_1_X:150577636-150577702:+|nuORF	ENST00000330374.6_1_X:150577636-150577702:+|nuORF	ENST00000330374.6_1_X:150577636-150577702:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8037414550781	2	509.801903	1017.58925	0.31699	0.0001616	3.2339	0.0016486	3.5509	0.0018103	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.74274	1	10268	10268		42.396	1.618	1	2635100			16718	10111	11350	11359	19317	19317					0.08116144265090952
IIKPRPPAI	9	Unmodified	_IIKPRPPAI_					0	0	0			REV__nc|ENSG00000260565|Q9NX77|ERVK13-1	REV__nc|ENSG00000260565|Q9NX77|ERVK13-1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.8139343261719	2	502.834394	1003.65424	1.429	0.00071853	-3.8396	-0.0019307	-2.4107	-0.0012122	502.8319644082704	97.23	0.40011	97.621	97.282	97.682	0.39065					12	9	2	0	0	0	0.20789	1	11712	11712		24.203	0	1	118300	+		16719	30250	11351	11360	19318	19318					0.15255506853213774
IIKQGEMLHKS	11	Unmodified	_IIKQGEMLHKS_					0	0	0			REV__ENSG00000177485|ENST00000557385|ZBTB33	REV__ENSG00000177485|ENST00000557385|ZBTB33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.3636474609375	2	642.360647	1282.70674	-1.1506	-0.00073908	4.3518	0.0027954	3.2012	0.0020563	642.3639567174044	110.02	1.5274	110.03	109.72	111.24	0.0060425					172	55	4	0	0	0	0.32318	1	11749	11749		69.628	20.092	1	1394500	+		16720	22210	11352	11361	19319	19319					0.07669677133867481
IIKQQLQRAYH	11	Unmodified	_IIKQQLQRAYH_					0	0	0			REV__nc|ENSG00000151779|A2RRP1-2|NBAS	REV__nc|ENSG00000151779|A2RRP1-2|NBAS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.60809326171875	3	466.605249	1396.79392	1.7469	0.00081509	4.1725	0.0019469	5.9194	0.002762	466.60708058634947	100.05	2.1066	100.4	99.392	101.5	0.34591					133	52	4	0	0	0	0.76251	1	12195	12195		19.263	1.4295	1	526140	+		16721	29931	11353	11362	19320	19320					0.11139219399797184
IIKRNWFV	8	Unmodified	_IIKRNWFV_					0	0	0			REV__ENST00000400286.2_1_13:86368440-86368581:-|nuORF	REV__ENST00000400286.2_1_13:86368440-86368581:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3275146484375	2	538.324194	1074.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.17	1	113.15	112.65	113.65	-0.024811								0	0	0	0.30004	1	12518	12518		21.702	1.7056	1		+		16722	26247	11354	11363	19321	19321					0.09950336193401199
IIKRNWFV	8	Unmodified	_IIKRNWFV_					0	0	0			REV__ENST00000400286.2_1_13:86368440-86368581:-|nuORF	REV__ENST00000400286.2_1_13:86368440-86368581:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.327880859375	2	538.324194	1074.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.48	1	114.5	114	115	0.026466								0	0	0	0.30004	1	12534	12534		21.702	3.3779	1		+		16723	26247	11354	11363	19322	19322					0.09950336193401199
IIKRSYEGAYI	11	Unmodified	_IIKRSYEGAYI_					0	0	0			REV__ENST00000561092.1_1_15:76580145-76584849:-|nuORF	REV__ENST00000561092.1_1_15:76580145-76584849:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.7292175292969	3	438.246839	1311.71869	-0.35145	-0.00015402	0.88987	0.00038998	0.53842	0.00023596	438.24733831114145	26.534	0.95217	26.495	25.982	26.934	-0.038525					41	21	3	0	0	0	0.17339	1	1188	1188		31.634	9.8538	1	20917	+		16724	28777	11355	11364	19323	19323					0.07529617148725265
IIKRSYEGAYI	11	Unmodified	_IIKRSYEGAYI_					0	0	0			REV__ENST00000561092.1_1_15:76580145-76584849:-|nuORF	REV__ENST00000561092.1_1_15:76580145-76584849:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	438.246839	1311.71869	-2.0834	-0.00091304	1.8981	0.00083184	-0.18528	-8.1199E-05	438.2475696982542	26.137	0.30252	26.137	25.993	26.295	0	-0.17903	0.00084409	NaN	31.634	14	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25751	+		16725	28777	11355	11364							0.07529617148725265
IIKTHVERSKV	11	Unmodified	_IIKTHVERSKV_					0	0	0			REV__ENSG00000109061|ENST00000226207|MYH1	REV__ENSG00000109061|ENST00000226207|MYH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2676086425781	3	437.269866	1308.78777	-0.53561	-0.00023421	-3.9588	-0.0017311	-4.4944	-0.0019653	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.71394	1	4131	4131		29.245	8.2128	1	4132000	+		16726	17743	11356	11365	19324	19324					0.14572701168253843
IILALQAS	8	Unmodified	_IILALQAS_					0	0	0			REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	414.7615661621094	2	414.763104	827.511654	-1.8105	-0.00075094	-1.5324	-0.00063559	-3.343	-0.0013865	414.7624144330171	88.215	3.3838	88.416	87.026	90.41	0.20114					235	79	5	0	0	0	0.86791	2	8741	8741;8753		28.254	0	1	11466000	+		16727	21784	11357	11366	19325;19326	19325					0.09099874391176854
IILALWAM	8	Unmodified	_IILALWAM_					0	0	0			REV__ENSG00000124780|ENST00000373231|KCNK17	REV__ENSG00000124780|ENST00000373231|KCNK17	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7771911621094	2	465.777699	929.540846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.021	1	80.158	79.658	80.658	0.13702								0	0	0	0.29725	1	7606	7606		24.504	4.5072	1		+		16728	18610	11358	11367	19327	19327					0.07325695415806877
IILALWAM	8	Unmodified	_IILALWAM_					0	0	0			REV__ENSG00000124780|ENST00000373231|KCNK17	REV__ENSG00000124780|ENST00000373231|KCNK17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77740478515625	2	465.777699	929.540846	0.5788	0.00026959	-0.79351	-0.0003696	-0.21471	-0.00010001	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.88393	1	7558	7558		33.493	4.3434	1	344270	+		16729	18610	11358	11367	19328	19328					0.07325695415806877
IILALWAM	8	Unmodified	_IILALWAM_					0	0	0			REV__ENSG00000124780|ENST00000373231|KCNK17	REV__ENSG00000124780|ENST00000373231|KCNK17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7775573730469	2	465.777699	929.540846	-0.69238	-0.0003225	0.57321	0.00026699	-0.11917	-5.5507E-05	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.88393	3	9467	9467;9527;9538		33.493	6.6969	1	927810	+		16730	18610	11358	11367	19329;19330;19331	19329					0.07325695415806877
IILAPGKFV	9	Unmodified	_IILAPGKFV_					0	0	0			REV__ENSG00000008226|ENST00000308059|DLEC1	REV__ENSG00000008226|ENST00000308059|DLEC1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.5248107910156	2	479.310221	956.605889	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.311	1	67.311	66.811	67.811	0								0	0	0	0.31828	1	5950	5950		24.203	2.2429	1		+		16731	16130	11359	11368	19332	19332					0.12585013213333696
IILDHGGLSSH	11	Unmodified	_IILDHGGLSSH_					0	0	0			REV__nc|ENSG00000158488|P15812-8|CD1E	REV__nc|ENSG00000158488|P15812-8|CD1E	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.8063354492188	2	574.806562	1147.59857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.384	1	33.596	33.096	34.096	0.21168								0	0	0	0.56276	1	2419	2419		54.776	3.5836	1		+		16732	20610	11360	11369	19333	19333					0.03067628874964612
IILDLIAPD	9	Unmodified	_IILDLIAPD_					0	0	0			REV__nc|ENSG00000239474|O60662-2|KLHL41	REV__nc|ENSG00000239474|O60662-2|KLHL41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7961120605469	2	491.794601	981.574648	-0.080821	-3.9747E-05	2.5593	0.0012587	2.4785	0.0012189	491.7960401944478	66.981	1.1041	66.997	66.508	67.612	0.016197					82	51	2	0	0	0	0.72402	1	6313	6313		38.806	3.1879	1	81064	+		16733	23804	11361	11370	19334	19334					0.08312395388566074
IILDLIAPD	9	Unmodified	_IILDLIAPD_					0	0	0			REV__nc|ENSG00000239474|O60662-2|KLHL41	REV__nc|ENSG00000239474|O60662-2|KLHL41	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7946472167969	2	491.794601	981.574648	-0.17405	-8.5598E-05	2.4406	0.0012003	2.2666	0.0011147	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.78536	1	3363	3363		29.15	2.3535	1	2994900	+		16734	23804	11361	11370	19335	19335					0.08312395388566074
IILDLIAPD	9	Unmodified	_IILDLIAPD_					0	0	0			REV__nc|ENSG00000239474|O60662-2|KLHL41	REV__nc|ENSG00000239474|O60662-2|KLHL41	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2535705566406	2	491.794601	981.574648	-0.12929	-6.3585E-05	2.1666	0.0010655	2.0373	0.001002	491.7955855098453	48.089	2.5309	49.012	48.356	50.887	0.92315					137	62	3	0	0	0	0.20752	1	4586	4586		53.351	18.151	1	805400	+		16735	23804	11361	11370	19336	19336					0.08312395388566074
IILDLIAPD	9	Unmodified	_IILDLIAPD_					0	0	0			REV__nc|ENSG00000239474|O60662-2|KLHL41	REV__nc|ENSG00000239474|O60662-2|KLHL41	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	491.794601	981.574648	-0.080821	-3.9747E-05	2.5593	0.0012587	2.4785	0.0012189	491.7960401944478	66.981	1.1041	66.997	66.508	67.612	0.016197	-0.16545	-0.00099121	NaN	38.806	82	51	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81064	+		16736	23804	11361	11370							0.08312395388566074
IILDPKPA	8	Unmodified	_IILDPKPA_					0	0	0			REV__ENSG00000269067|ENST00000594710|ZNF728	REV__ENSG00000269067|ENST00000594710|ZNF728	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.2557373046875	2	433.770929	865.527304	-0.16733	-7.2581E-05	-1.5625	-0.00067777	-1.7298	-0.00075035	433.7707060938126	107.31	0.461	107.27	106.95	107.41	-0.034409					13	10	2	0	0	0	0.4196	1	11691	11691		37.028	1.8278	1	161550	+		16737	23973	11362	11371	19337	19337					0.08916160908222537
IILDRLQLRR	10	Unmodified	_IILDRLQLRR_					0	0	0			REV__nc|ENSG00000132694|O15085|ARHGEF11	REV__nc|ENSG00000132694|O15085|ARHGEF11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.392333984375	2	648.417146	1294.81974	-0.0023379	-1.5159E-06	4.3969	0.002851	4.3946	0.0028495	648.4192892393629	107.06	0.3531	107.03	106.77	107.12	-0.034409					11	7	2	0	0	0	0.37624	1	11613	11613		29.15	16.943	1	77126	+		16738	19023	11363	11372	19338	19338					0.18412113642057193
IILEPKSMA	9	Unmodified	_IILEPKSMA_					0	0	0			REV__ENSG00000197472|ENST00000339986|ZNF695	REV__ENSG00000197472|ENST00000339986|ZNF695	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.29034423828125	2	501.288628	1000.5627	-0.50775	-0.00025453	3.985	0.0019976	3.4772	0.0017431	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.72402	1	8131	8131		38.806	1.647	1	3014100	+		16739	23236	11364	11373	19339	19339					0.06244455373735036
IILEPKSMA	9	Unmodified	_IILEPKSMA_					0	0	0			REV__ENSG00000197472|ENST00000339986|ZNF695	REV__ENSG00000197472|ENST00000339986|ZNF695	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2904357910156	2	501.288628	1000.5627	-0.28392	-0.00014233	3.869	0.0019395	3.5851	0.0017972	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.74721	1	10015	10015		37.159	1.5408	1	9038000	+		16740	23236	11364	11373	19340	19340					0.06244455373735036
IILFFAKRR	9	Unmodified	_IILFFAKRR_					0	0	0			REV__ENST00000231368.9_1_5:96365570-96365711:+|nuORF	REV__ENST00000231368.9_1_5:96365570-96365711:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3533935546875	2	582.374218	1162.73388	-1.3468	-0.00078434	3.2174	0.0018737	1.8706	0.0010894	582.3757166576924	103.4	0.69882	103.52	103.42	104.12	0.11494					31	17	2	0	0	0	0.20789	1	10859	10859		25.45	2.4077	1	1033100	+		16741	24197	11365	11374	19341	19341					0.15902573527228014
IILFPFLLHV	10	Unmodified	_IILFPFLLHV_					0	0	0			REV__ENST00000478188.5_1_4:57883363-57883849:+|nuORF	REV__ENST00000478188.5_1_4:57883363-57883849:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5890808105469	3	404.589877	1210.7478	0.88743	0.00035905	-2.5467	-0.0010304	-1.6593	-0.00067134	404.58872084181826	39.368	1.6571	39.379	38.582	40.239	0.011173					116	38	4	0	0	0	0.8486	1	2785	2785		18.262	1.0953	1	391440	+		16742	27373	11366	11375	19342	19342					0.15085806235651944
IILFVQSLLY	10	Unmodified	_IILFVQSLLY_					0	0	0			REV__nc|ENSG00000038532|Q2KHT3-2|CLEC16A	REV__nc|ENSG00000038532|Q2KHT3-2|CLEC16A	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.869873046875	2	604.8681	1207.72165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.5	1	114.47	113.97	114.97	-0.024452								0	0	0	0.45132	1	12687	12687		11.511	0.64546	1		+		16743	16306	11367	11376	19343	19343					0.12609492273531941
IILGDGMITL	10	Unmodified	_IILGDGMITL_					0	0	0		ENSG00000164161|ENST00000296575|HHIP	ENSG00000164161|ENST00000296575|HHIP	ENSG00000164161|ENST00000296575|HHIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303466796875	2	523.301736	1044.58892	-0.041207	-2.1563E-05	3.5312	0.0018479	3.49	0.0018263	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.85934	1	9348	9348		35.618	2.8059	1	12431000			16744	5927	11368	11377	19344	19344					0.06840724545213561
IILGDGMITL	10	Unmodified	_IILGDGMITL_					0	0	0		ENSG00000164161|ENST00000296575|HHIP	ENSG00000164161|ENST00000296575|HHIP	ENSG00000164161|ENST00000296575|HHIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3031616210938	2	523.301736	1044.58892	1.4247	0.00074556	1.9478	0.0010193	3.3725	0.0017648	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.74274	1	8981	8981		42.396	3.59	1	3882100			16745	5927	11368	11377	19345	19345					0.06840724545213561
IILGFVLSCR	10	Carbamidomethyl (C)	_IILGFVLSC(Carbamidomethyl (C))R_	IILGFVLSC(1)R		IILGFVLSC(41)R		0	1	0			REV__nc|ENSG00000182022|Q7LFX5-2|CHST15	REV__nc|ENSG00000182022|Q7LFX5-2|CHST15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3431396484375	2	589.341726	1176.6689	-0.63668	-0.00037522	3.1391	0.00185	2.5025	0.0014748	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.77314	1	10937	10937		40.778	9.2484	1	2236100	+		16746	22493	11369	11378	19346	19346	274				0.08763210939059718
IILGLIYLDS	10	Unmodified	_IILGLIYLDS_					0	0	0		ENSG00000221858|ENST00000641592|OR2A12	ENSG00000221858|ENST00000641592|OR2A12	ENSG00000221858|ENST00000641592|OR2A12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3395385742188	2	560.336633	1118.65871	3.1377	0.0017581	3.0866	0.0017295	6.2243	0.0034877	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.81018	4	11118	11118;11223;11319;11331		38.806	3.8107	1	83033000			16747	8674	11370	11379	19347;19348;19349;19350	19347					0.10412926485469143
IILGLIYLDS	10	Unmodified	_IILGLIYLDS_					0	0	0		ENSG00000221858|ENST00000641592|OR2A12	ENSG00000221858|ENST00000641592|OR2A12	ENSG00000221858|ENST00000641592|OR2A12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3406372070312	2	560.336633	1118.65871	3.1454	0.0017625	3.4672	0.0019428	6.6126	0.0037053	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.85939	3	13098	12821;12968;13098		29.15	3.6994	1	151040			16748	8674	11370	11379	19351;19352;19353	19353					0.10412926485469143
IILGLIYLDS	10	Unmodified	_IILGLIYLDS_					0	0	0		ENSG00000221858|ENST00000641592|OR2A12	ENSG00000221858|ENST00000641592|OR2A12	ENSG00000221858|ENST00000641592|OR2A12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.33935546875	2	560.336633	1118.65871	2.2618	0.0012674	4.146	0.0023231	6.4078	0.0035905	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.86201	1	12324	12324		24.203	2.2429	1	14759000			16749	8674	11370	11379	19354	19354					0.10412926485469143
IILGLIYLDS	10	Unmodified	_IILGLIYLDS_					0	0	0		ENSG00000221858|ENST00000641592|OR2A12	ENSG00000221858|ENST00000641592|OR2A12	ENSG00000221858|ENST00000641592|OR2A12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3402709960938	2	560.336633	1118.65871	2.9009	0.0016255	3.4846	0.0019525	6.3855	0.003578	560.3384791854071	101.98	1.2376	102.3	101.86	103.1	0.32511					132	30	6	0	0	0	0.81018	3	12455	12407;12455;12479		38.806	6.6555	1	15824000			16750	8674	11370	11379	19355;19356;19357	19356					0.10412926485469143
IILGLQFLHSK	11	Unmodified	_IILGLQFLHSK_					0	0	0		nc|ENSG00000065675|Q04759-3|PRKCQ;nc|ENSG00000065675|Q04759-2|PRKCQ;ENSG00000065675|ENST00000263125|PRKCQ	nc|ENSG00000065675|Q04759-3|PRKCQ	nc|ENSG00000065675|Q04759-3|PRKCQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8937377929688	2	634.889898	1267.76524	-0.13084	-8.307E-05	4.2165	0.002677	4.0856	0.0025939	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.7342	1	11699	11699		25.574	3.6142	1	40768000			16751	1139	11371	11380	19358	19358					0.14207101770648478
IILGLQFLHSK	11	Unmodified	_IILGLQFLHSK_					0	0	0		nc|ENSG00000065675|Q04759-3|PRKCQ;nc|ENSG00000065675|Q04759-2|PRKCQ;ENSG00000065675|ENST00000263125|PRKCQ	nc|ENSG00000065675|Q04759-3|PRKCQ	nc|ENSG00000065675|Q04759-3|PRKCQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	635.3910522460938	2	634.889898	1267.76524	2.7957	0.0017749	1.1766	0.000747	3.9722	0.0025219	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.7342	1	11897	11897		25.574	1.0549	1	42597000			16752	1139	11371	11380	19359	19359					0.14207101770648478
IILGVFPFV	9	Unmodified	_IILGVFPFV_					0	0	0		ENSG00000157881|ENST00000378466|PANK4;ENST00000502512.1_3_1:2441299-2442819:-|nuORF;ENST00000471361.1_1_1:2441894-2444451:-|nuORF	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.8141784667969	2	502.812596	1003.61064	-0.061598	-3.0972E-05	2.1756	0.0010939	2.114	0.0010629	502.81375645147	97.475	3.9537	97.532	96.775	100.73	0.056839					266	91	5	0	0	0	0.78292	2	10372	10287;10372		29.842	2.3424	1	22149000			16753	5452	11372	11381	19360;19361	19361					0.10897897356085195
IILGVFPFV	9	Unmodified	_IILGVFPFV_					0	0	0		ENSG00000157881|ENST00000378466|PANK4;ENST00000502512.1_3_1:2441299-2442819:-|nuORF;ENST00000471361.1_1_1:2441894-2444451:-|nuORF	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	502.8138122558594	2	502.812596	1003.61064	0.77487	0.00038961	1.4093	0.00070859	2.1841	0.0010982	502.8133310235605	97.118	3.7782	97.281	96.705	100.48	0.16317					264	87	5	0	0	0	0.72098	2	10039	10039;10123		39.021	8.5179	1	19692000			16754	5452	11372	11381	19362;19363	19362					0.10897897356085195
IILGVFPFV	9	Unmodified	_IILGVFPFV_					0	0	0		ENSG00000157881|ENST00000378466|PANK4;ENST00000502512.1_3_1:2441299-2442819:-|nuORF;ENST00000471361.1_1_1:2441894-2444451:-|nuORF	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.8143615722656	2	502.812596	1003.61064	1.0921	0.0005491	1.6154	0.00081223	2.7074	0.0013613	502.8134123573575	96.951	3.6734	97.356	96.802	100.47	0.40498					209	90	5	0	0	0	0.78292	7	11592	11592;11626;11638;11650;11682;11695;11707		29.842	8.1392	1	10379000			16755	5452	11372	11381	19364;19365;19366;19367;19368;19369;19370	19364					0.10897897356085195
IILGVFPFV	9	Unmodified	_IILGVFPFV_					0	0	0		ENSG00000157881|ENST00000378466|PANK4;ENST00000502512.1_3_1:2441299-2442819:-|nuORF;ENST00000471361.1_1_1:2441894-2444451:-|nuORF	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.8141784667969	2	502.812596	1003.61064	1.4802	0.00074428	1.1686	0.00058758	2.6488	0.0013319	502.81319262622696	97.079	3.8751	97.469	96.863	100.74	0.39065					217	95	5	0	0	0	0.78292	1	11749	11749		29.842	1.5873	1	11311000			16756	5452	11372	11381	19371	19371					0.10897897356085195
IILHQFARPN	10	Unmodified	_IILHQFARPN_					0	0	0		ENSG00000146267|ENST00000389677|FAXC	ENSG00000146267|ENST00000389677|FAXC	ENSG00000146267|ENST00000389677|FAXC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.8466186523438	2	604.848564	1207.68258	-1.2735	-0.00077028	-2.7685	-0.0016745	-4.042	-0.0024448	604.84680283311	96.063	3.2734	96.265	95.11	98.383	0.20242					203	76	4	0	0	0	0.86452	1	9930	9930		30.504	1.3336	1	597870			16757	4832	11373	11382	19372	19372					0.08704204762534573
IILIETKAM	9	Unmodified	_IILIETKAM_					0	0	0		ENSG00000015133|ENST00000389857|CCDC88C	ENSG00000015133|ENST00000389857|CCDC88C	ENSG00000015133|ENST00000389857|CCDC88C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3150634765625	2	516.312103	1030.60965	3.1012	0.0016012	0.56309	0.00029073	3.6643	0.0018919	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.78536	1	12931	12931		29.15	1.2673	1	1162600			16758	820	11374	11383	19373	19373					0.09557314924859384
IILIETKAM	9	Unmodified	_IILIETKAM_					0	0	0		ENSG00000015133|ENST00000389857|CCDC88C	ENSG00000015133|ENST00000389857|CCDC88C	ENSG00000015133|ENST00000389857|CCDC88C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.8165283203125	2	516.312103	1030.60965	0.86903	0.00044869	2.9048	0.0014998	3.7738	0.0019485	516.3134632199627	112.89	2.8792	112.91	112.73	115.61	0.028854					110	77	2	0	0	0	0.78058	1	12445	12445		30.504	6.9809	1	336880			16759	820	11374	11383	19374	19374					0.09557314924859384
IILKPNVC	8	Unmodified	_IILKPNVC_					0	0	0		ENSG00000183185|ENST00000472788|GABRR3	ENSG00000183185|ENST00000472788|GABRR3	ENSG00000183185|ENST00000472788|GABRR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27447509765625	2	450.272781	898.531009	-0.14122	-6.3587E-05	3.6649	0.0016502	3.5237	0.0015866	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.86791	1	9984	9984		28.254	5.2118	1	47650000			16760	7506	11375	11384	19375	19375					0.07768507410446546
IILKPNVC	8	Unmodified	_IILKPNVC_					0	0	0		ENSG00000183185|ENST00000472788|GABRR3	ENSG00000183185|ENST00000472788|GABRR3	ENSG00000183185|ENST00000472788|GABRR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2746276855469	2	450.272781	898.531009	0.70497	0.00031743	3.7194	0.0016747	4.4244	0.0019922	450.274392035395	95.119	1.9705	95.282	94.908	96.878	0.16307					118	46	3	0	0	0	0.86791	1	9785	9785		28.254	7.7724	1	967700			16761	7506	11375	11384	19376	19376					0.07768507410446546
IILLGTFG	8	Unmodified	_IILLGTFG_					0	0	0		ENSG00000000003|ENST00000373020|TSPAN6	ENSG00000000003|ENST00000373020|TSPAN6	ENSG00000000003|ENST00000373020|TSPAN6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25830078125	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.81548	1	554	554		20.482	4.8456	1	679020			16762	644	11376	11385	19377	19377					0.08288775879520927
IILLKQGPPGT	11	Unmodified	_IILLKQGPPGT_					0	0	0			REV__ENSG00000197483|ENST00000598519|ZNF628	REV__ENSG00000197483|ENST00000598519|ZNF628	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8536987304688	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.64498	2	10544	10497;10544		39.253	3.6629	1	34546000	+		16763	23237	11377	11386	19378;19379	19379					0.1340743747093711
IILLKQGPPGT	11	Unmodified	_IILLKQGPPGT_					0	0	0			REV__ENSG00000197483|ENST00000598519|ZNF628	REV__ENSG00000197483|ENST00000598519|ZNF628	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8533325195312	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.69995	1	11236	11236		31.53	3.6476	1	50786000	+		16764	23237	11377	11386	19380	19380					0.1340743747093711
IILLKQGPPGT	11	Unmodified	_IILLKQGPPGT_					0	0	0			REV__ENSG00000197483|ENST00000598519|ZNF628	REV__ENSG00000197483|ENST00000598519|ZNF628	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8539428710938	2	568.855524	1135.69649	-1.3907	-0.00079112	-2.9165	-0.001659	-4.3072	-0.0024502	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.63176	1	10955	10955		40.778	5.1599	1	72465000	+		16765	23237	11377	11386	19381	19381					0.1340743747093711
IILLLLKIWK	10	Unmodified	_IILLLLKIWK_					0	0	0		ENST00000594643.1_1_19:48893647-48894615:-|nuORF;ENST00000599084.1_1_19:48892794-48894615:-|nuORF;ENSG00000105438|ENST00000330720|KDELR1	ENST00000594643.1_1_19:48893647-48894615:-|nuORF	ENST00000594643.1_1_19:48893647-48894615:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.29705810546875	3	418.296694	1251.86825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.044	1	74.087	73.587	74.587	0.0429								0	0	0	0.45132	1	7070	7070		4.3388	0.9301	1				16766	2218	11378	11387	19382	19382					0.25239214229236495
IILLLLKIWK	10	Unmodified	_IILLLLKIWK_					0	0	0		ENST00000594643.1_1_19:48893647-48894615:-|nuORF;ENST00000599084.1_1_19:48892794-48894615:-|nuORF;ENSG00000105438|ENST00000330720|KDELR1	ENST00000594643.1_1_19:48893647-48894615:-|nuORF	ENST00000594643.1_1_19:48893647-48894615:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.29705810546875	3	418.296694	1251.86825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.313	1	75.708	75.208	76.208	0.39507								0	0	0	0.45132	1	8514	8514		4.3388	0.9301	1				16767	2218	11378	11387	19383	19383					0.25239214229236495
IILPICAR	8	Unmodified	_IILPICAR_					0	0	0			REV__ENST00000450326.5_1_3:9470680-9476039:+|nuORF	REV__ENST00000450326.5_1_3:9470680-9476039:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2736511230469	2	449.780773	897.546994	0.7212	0.00032438	3.9519	0.0017775	4.6731	0.0021019	449.78245052127835	97.315	0.61774	97.478	97.095	97.713	0.16316					21	14	2	0	0	0	0.4196	1	10079	10079		12.959	0	1	40823	+		16768	26615	11379	11388	19384	19384					0.09412213647340195
IILPLKEQIST	11	Unmodified	_IILPLKEQIST_					0	0	0			REV__ENSG00000133216|ENST00000374630|EPHB2	REV__ENSG00000133216|ENST00000374630|EPHB2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.8875122070312	2	627.887021	1253.75949	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.96	1	116.88	116.38	117.38	-0.07531								0	0	0	0.56276	1	12550	12550		24.519	0	1		+		16769	19065	11380	11389	19385	19385					0.14275958468329009
IILPSKTT	8	Unmodified	_IILPSKTT_					0	0	0			REV__ENSG00000171988|ENST00000399262|JMJD1C	REV__ENSG00000171988|ENST00000399262|JMJD1C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.77490234375	2	436.776211	871.537869	-1.136	-0.00049617	-1.8731	-0.00081814	-3.0091	-0.0013143	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.87479	1	8960	8960		30.504	5.0535	1	8774400	+		16770	21793	11381	11390	19386	19386					0.09696143562666748
IILRLSIYE	9	Unmodified	_IILRLSIYE_					0	0	0			REV__ENSG00000131467|ENST00000590720|PSME3	REV__ENSG00000131467|ENST00000590720|PSME3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3406372070312	2	560.342249	1118.66995	-0.40673	-0.00022791	-3.2012	-0.0017938	-3.608	-0.0020217	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.78536	1	10706	10706		29.15	3.5755	1	60162000	+		16771	18954	11382	11391	19387	19387					0.11535748579603933
IILRLSIYE	9	Unmodified	_IILRLSIYE_					0	0	0			REV__ENSG00000131467|ENST00000590720|PSME3	REV__ENSG00000131467|ENST00000590720|PSME3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3410034179688	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.78058	1	12777	12777		30.504	0	1	4071000	+		16772	18954	11382	11391	19388	19388					0.11535748579603933
IILRMIYGVF	10	Unmodified	_IILRMIYGVF_					0	0	0		ENST00000249299.6_1_7:117832100-117832181:+|nuORF	ENST00000249299.6_1_7:117832100-117832181:+|nuORF	ENST00000249299.6_1_7:117832100-117832181:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.88037109375	2	612.862295	1223.71004	-1.2476	-0.00076459	-0.91942	-0.00056348	-2.167	-0.0013281	612.8597864671168	105.25	0.35471	105.32	105.18	105.53	0.073112					10	8	2	0	0	0	0.37624	1	11169	11169		31.955	4.0726	1	80401			16773	9286	11383	11392	19389	19389					0.10712971978523456
IILRRKHGDS	10	Unmodified	_IILRRKHGDS_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8563232421875	2	597.856921	1193.69929	-0.56163	-0.00033577	-0.46706	-0.00027924	-1.0287	-0.00061501	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.86218	1	9928	9928		32.812	0	1	6282800	+		16774	20437;29946;29947	11384	11393	19390	19390					0.11018705648461946
IILSFIQKGT	10	Unmodified	_IILSFIQKGT_					0	0	0			REV__nc|ENSG00000181222|P24928|POLR2A	REV__nc|ENSG00000181222|P24928|POLR2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.33984375	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.85251	1	12967	12967		19.997	0.89325	1	4071000	+		16775	22447	11385	11394	19391	19391					0.11535748579603933
IILSFKLWLY	10	Unmodified	_IILSFKLWLY_					0	0	0			REV__ENST00000478112.1_1_10:71211350-71243770:+|nuORF	REV__ENST00000478112.1_1_10:71211350-71243770:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3930053710938	2	648.391742	1294.76893	-1.1411	-0.00073988	2.087	0.0013532	0.94594	0.00061334	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.84874	1	12707	12707		18.324	2.3176	1	2297700	+		16776	17087	11386	11395	19392	19392					0.1333377154453501
IILTHGAS	8	Unmodified	_IILTHGAS_					0	0	0		nc|ENSG00000151287|Q5JUR7-2|TEX30;ENSG00000151287|ENST00000376032|TEX30	nc|ENSG00000151287|Q5JUR7-2|TEX30	nc|ENSG00000151287|Q5JUR7-2|TEX30	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.24847412109375	2	406.237253	810.459953	-1.8144	-0.0007371	1.2696	0.00051576	-0.54483	-0.00022133	406.2377950010985	88.245	0.44833	88.447	88.016	88.464	0.20114					20	10	3	0	0	0	0.4196	1	8752	8752		54.765	26.51	1	355840			16777	5105	11387	11396	19393	19393					0.047141306972775965
IILTHGAS	8	Unmodified	_IILTHGAS_					0	0	0		nc|ENSG00000151287|Q5JUR7-2|TEX30;ENSG00000151287|ENST00000376032|TEX30	nc|ENSG00000151287|Q5JUR7-2|TEX30	nc|ENSG00000151287|Q5JUR7-2|TEX30	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24847412109375	2	406.237253	810.459953	1.594	0.00064752	-1.1944	-0.00048522	0.39952	0.0001623	406.2358738039622	88.085	1.1833	88.534	88.017	89.2	0.44893					46	28	3	0	0	0	0.4196	1	10375	10375		35.201	3.2459	1	200040			16778	5105	11387	11396	19394	19394					0.047141306972775965
IILTKRSL	8	Unmodified	_IILTKRSL_					0	0	0		ENSG00000221996|ENST00000624801|OR52B4	ENSG00000221996|ENST00000624801|OR52B4	ENSG00000221996|ENST00000624801|OR52B4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28759765625	2	472.318577	942.622602	-0.91863	-0.00043388	0.68759	0.00032476	-0.23104	-0.00010912	472.3198423187872	94.815	0.12486	95.046	94.942	95.067	0.23103					4	2	2	0	0	0	0.4196	1	9700	9700		11.511	3.2797	1	62125			16779	8695	11388	11397	19395	19395					0.14899514099283806
IILTKRSL	8	Unmodified	_IILTKRSL_					0	0	0		ENSG00000221996|ENST00000624801|OR52B4	ENSG00000221996|ENST00000624801|OR52B4	ENSG00000221996|ENST00000624801|OR52B4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2873229980469	2	472.318577	942.622602	-0.46508	-0.00021967	1.4894	0.00070349	1.0244	0.00048383	472.31934328405924	95.034	0.19596	95.453	95.313	95.509	0.41964					6	4	2	0	0	0	0.4196	1	11401	11401		24.203	11.244	1	82245			16780	8695	11388	11397	19396	19396					0.14899514099283806
IILTLIEN	8	Unmodified	_IILTLIEN_					0	0	0			REV__ENSG00000196184|ENST00000423932|OR10J1	REV__ENSG00000196184|ENST00000423932|OR10J1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.79083251953125	2	464.789318	927.564084	-0.5794	-0.0002693	3.5758	0.001662	2.9964	0.0013927	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.85277	1	2216	2216		25.45	2.4135	1	409180	+		16781	23101	11389	11398	19397	19397					0.09740412734140591
IILTLIPSG	9	Unmodified	_IILTLIPSG_					0	0	0		nc|ENSG00000112337|O00624-2|SLC17A2;nc|ENSG00000112337|O00624|SLC17A2;ENSG00000112337|ENST00000377850|SLC17A2	nc|ENSG00000112337|O00624-2|SLC17A2	nc|ENSG00000112337|O00624-2|SLC17A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8010559082031	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.7932	1	3457	3457		18.324	1.8513	1	279560			16782	2658	11390	11399	19398	19398					0.11905003113815837
IILVELLCF	9	Unmodified	_IILVELLCF_					0	0	0			REV__ENSG00000188394|ENST00000616002|GPR21	REV__ENSG00000188394|ENST00000616002|GPR21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8181762695312	2	531.817021	1061.61949	0.70533	0.00037511	-1.0774	-0.00057299	-0.37209	-0.00019788	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.76402	1	8370	8370		35.201	1.6851	1	1163300	+		16783	23000	11391	11400	19399	19399					0.09114502930265189
IILVLIALPS	10	Unmodified	_IILVLIALPS_					0	0	0		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.360595703125	2	526.359911	1050.70527	-0.016718	-8.7995E-06	2.2479	0.0011832	2.2312	0.0011744	526.3609420824897	35.324	1.4285	35.312	34.729	36.157	-0.012199					134	33	5	0	0	0	0.88106	1	2139	2139		12.207	0.69583	1	5338900			16784	8311	11392	11401	19400	19400					0.1819441110740172
IIMELCTLGEL	11	Unmodified	_IIMELCTLGEL_					0	0	0		nc|ENSG00000169398|Q05397-2|PTK2;nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-4|PTK2;nc|ENSG00000169398|Q05397-3|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	617.8279418945312	2	617.824717	1233.63488	0.71233	0.0004401	3.0431	0.0018801	3.7554	0.0023202	617.8267216674416	77.994	0.60945	78.13	77.878	78.487	0.13667					45	20	3	0	0	0	0.36477	1	7351	7351		62.107	22.049	1	220630			16785	6494	11393	11402	19401	19401					0.02741001665162912
IIMGQRFY	8	Unmodified	_IIMGQRFY_					0	0	0			REV__ENSG00000197050|ENST00000337995|ZNF420	REV__ENSG00000197050|ENST00000337995|ZNF420	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.3042602539062	2	514.273312	1026.53207	0.70594	0.00036305	1.467	0.00075445	2.173	0.0011175	514.2740089681404	66.762	0.38511	67.148	66.85	67.235	0.38515					13	10	2	0	0	0	0.4196	1	7287	7287		29.842	0	1	96563	+		16786	23189	11394	11403	19402	19402					0.019867217793489544
IIMSDSYL	8	Unmodified	_IIMSDSYL_					0	0	0		ENSG00000156097|ENST00000527748|GPR61	ENSG00000156097|ENST00000527748|GPR61	ENSG00000156097|ENST00000527748|GPR61	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.234375	2	471.236061	940.45757	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.021	1	73.575	73.075	74.075	0.55386								0	0	0	0.090208	1	8213	8213		65.897	0	1				16787	5361	11395	11404	19403	19403					-0.015040858226825549
IIMSDSYL	8	Unmodified	_IIMSDSYL_					0	0	0		ENSG00000156097|ENST00000527748|GPR61	ENSG00000156097|ENST00000527748|GPR61	ENSG00000156097|ENST00000527748|GPR61	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.23321533203125	2	471.236061	940.45757	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.244	1	73.798	73.298	74.298	0.55386								0	0	0	0.28381	1	8248	8248		54.765	2.4655	1				16788	5361	11395	11404	19404	19404					-0.015040858226825549
IINAKLSIC	9	Unmodified	_IINAKLSIC_					0	0	0			REV__ENST00000264645.11_1_17:38327543-38327843:+|nuORF	REV__ENST00000264645.11_1_17:38327543-38327843:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7912902832031	2	487.788795	973.563038	2.2834	0.0011138	2.1337	0.0010408	4.4171	0.0021546	487.78982512509754	97.459	1.2236	97.404	96.932	98.156	-0.05555					62	28	3	0	0	0	0.76996	1	10490	10490		33.516	3.674	1	455240	+		16789	24474	11396	11405	19405	19405					0.07519875093601058
IINEKQLYVM	10	Unmodified	_IINEKQLYVM_					0	0	0			REV__nc|ENSG00000276557|A0A087X0M5|TRBV18	REV__nc|ENSG00000276557|A0A087X0M5|TRBV18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	625.845947265625	2	625.844299	1249.67404	0.75679	0.00047363	2.4963	0.0015623	3.2531	0.0020359	625.8458288278665	36.204	0.77826	36.486	36.152	36.931	0.28173					49	18	4	0	0	0	0.44803	1	2819	2819		60.118	8.9256	1	1817100	+		16790	30269	11397	11406	19406	19406					0.05919470010985606
IINFQHLILP	10	Unmodified	_IINFQHLILP_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3656005859375	2	604.363516	1206.71248	2.3603	0.0014265	2.8185	0.0017034	5.1787	0.0031298	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.85285	1	12905	12905		11.511	0	1	5984800			16791	2646	11398	11407	19407	19407					0.11739143707859512
IINHVARF	8	Unmodified	_IINHVARF_					0	0	0		ENST00000483495.5_1_20:34214165-34218616:-|nuORF;ENSG00000214078|ENST00000397443|CPNE1;ENSG00000085719|ENST00000517490|CPNE3	ENST00000483495.5_1_20:34214165-34218616:-|nuORF	ENST00000483495.5_1_20:34214165-34218616:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	485.2850036621094	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.779	1	58.779	58.279	59.279	0								0	0	0	0.30316	1	5102	5102		42.474	5.446	1				16792	1536	11399	11408	19408	19408					0.07004903608174118
IINLKLERFQ	10	Unmodified	_IINLKLERFQ_					0	0	0		ENSG00000149575|ENST00000278947|SCN2B	ENSG00000149575|ENST00000278947|SCN2B	ENSG00000149575|ENST00000278947|SCN2B	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.3857421875	2	637.38498	1272.75541	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.58	1	111.69	111.19	112.19	0.11118								0	0	0	0.45132	1	12021	12021		31.53	4.8369	1				16793	5037	11400	11409	19409	19409					0.12993913765262732
IINLLVPS	8	Unmodified	_IINLLVPS_					0	0	0		ENSG00000178084|ENST00000318351|HTR3C	ENSG00000178084|ENST00000318351|HTR3C	ENSG00000178084|ENST00000318351|HTR3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78009033203125	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.9159	1	3479	3479		44.531	3.9584	1	2833200			16794	7182	11401	11410	19410	19410					0.10388447425282266
IINLLVPS	8	Unmodified	_IINLLVPS_					0	0	0		ENSG00000178084|ENST00000318351|HTR3C	ENSG00000178084|ENST00000318351|HTR3C	ENSG00000178084|ENST00000318351|HTR3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7784423828125	2	434.778754	867.542954	-0.7455	-0.00032413	3.1434	0.0013667	2.3979	0.0010426	434.7799642778913	44.364	1.5041	44.814	44.322	45.826	0.45025					111	36	4	0	0	0	0.91005	1	4034	4034		42.474	5.446	1	4473900			16795	7182	11401	11410	19411	19411					0.10388447425282266
IINLSRKSD	9	Unmodified	_IINLSRKSD_					0	0	0		ENSG00000012232|ENST00000220562|EXTL3	ENSG00000012232|ENST00000220562|EXTL3	ENSG00000012232|ENST00000220562|EXTL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3056030273438	2	523.303655	1044.59276	0.69703	0.00036476	-1.0638	-0.00055667	-0.36673	-0.00019191	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.55097	1	8368	8368		49.442	1.7842	1	3801600			16796	800	11402	11411	19412	19412					0.07224530363305348
IINNDLQLKRL	11	Unmodified	_IINNDLQLKRL_					0	0	0			REV__nc|ENSG00000171962|Q9H069-2|DRC3	REV__nc|ENSG00000171962|Q9H069-2|DRC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.2738037109375	3	447.273388	1338.79833	2.748	0.0012291	-4.062	-0.0018168	-1.314	-0.00058773	447.27148035991394	107.89	0.36398	107.85	107.55	107.92	-0.031487					34	8	5	0	0	0	0.74405	1	11938	11938		23.378	2.5408	1	23752000	+		16797	21792	11403	11412	19413	19413					0.1424868382268869
IINNDLQLKRL	11	Unmodified	_IINNDLQLKRL_					0	0	0			REV__nc|ENSG00000171962|Q9H069-2|DRC3	REV__nc|ENSG00000171962|Q9H069-2|DRC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2730712890625	3	447.273388	1338.79833	-1.2893	-0.00057667	-0.045837	-2.0502E-05	-1.3351	-0.00059717	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.71207	2	11503	11503;11514		29.551	9.2357	1	31263000	+		16798	21792	11403	11412	19414;19415	19414					0.1424868382268869
IINNDLQLKRL	11	Unmodified	_IINNDLQLKRL_					0	0	0			REV__nc|ENSG00000171962|Q9H069-2|DRC3	REV__nc|ENSG00000171962|Q9H069-2|DRC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.27294921875	3	447.273388	1338.79833	0.74994	0.00033543	-1.9449	-0.00086992	-1.195	-0.00053449	447.27246467576646	106.88	1.1653	106.97	106.51	107.68	0.091255					134	27	6	0	0	0	0.74771	2	11495	11495;11518		22.562	3.2989	1	19906000	+		16799	21792	11403	11412	19416;19417	19416					0.1424868382268869
IINNDLQLKRL	11	Unmodified	_IINNDLQLKRL_					0	0	0			REV__nc|ENSG00000171962|Q9H069-2|DRC3	REV__nc|ENSG00000171962|Q9H069-2|DRC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.2740478515625	3	447.273388	1338.79833	-1.7854	-0.00079855	0.67265	0.00030086	-1.1127	-0.00049769	447.27362843006824	106.96	1.1721	107.02	106.47	107.64	0.053757					124	27	6	0	0	0	0.70584	1	11469	11469		30.569	5.4429	1	15545000	+		16800	21792	11403	11412	19418	19418					0.1424868382268869
IINNDLQLKRL	11	Unmodified	_IINNDLQLKRL_					0	0	0			REV__nc|ENSG00000171962|Q9H069-2|DRC3	REV__nc|ENSG00000171962|Q9H069-2|DRC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.2749938964844	3	447.273388	1338.79833	-1.7854	-0.00079855	1.2257	0.00054822	-0.55967	-0.00025032	447.27387124439326	107.85	0.39288	107.89	107.58	107.97	0.036125					35	9	5	0	0	0	0.75121	1	11495	11495		21.78	0.74819	1	27978000	+		16801	21792	11403	11412	19419	19419					0.1424868382268869
IINNKNFHK	9	Unmodified	_IINNKNFHK_					0	0	0		ENSG00000164305|ENST00000308394|CASP3	ENSG00000164305|ENST00000308394|CASP3	ENSG00000164305|ENST00000308394|CASP3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.3125610351562	2	564.31964	1126.62473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.048	1	57.02	56.52	57.52	-0.02866								0	0	0	0.30416	1	5246	5246		29.15	1.2673	1				16802	5950	11404	11413	19420	19420					0.06647942837071241
IINQEALVR	9	Unmodified	_IINQEALVR_					0	0	0			REV__ENSG00000183508|ENST00000369448|TENT5C	REV__ENSG00000183508|ENST00000369448|TENT5C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.3130493164062	2	528.314023	1054.61349	2.8563	0.001509	-2.641	-0.0013953	0.2152	0.0001137	528.3126813461913	98.458	1.2186	98.403	97.86	99.078	-0.054825					71	27	4	0	0	0	0.76764	1	10613	10613		34.173	7.4796	1	423590	+		16803	22610	11405	11414	19421	19421					0.08837120742941806
IINRVGPL	8	Unmodified	_IINRVGPL_					0	0	0			REV__ENSG00000242732|ENST00000609883|RTL5	REV__ENSG00000242732|ENST00000609883|RTL5	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.2828369140625	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.872	1	40.879	40.379	41.379	0.0065727								0	0	0	0.30674	1	2971	2971		15.636	0.97212	1		+		16804	23834	11406	11415	19422	19422					0.10438385376664883
IINSSITTK	9	Unmodified	_IINSSITTK_					0	0	0		ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	ENSG00000163468|ENST00000295688|CCT3	ENSG00000163468|ENST00000295688|CCT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7872314453125	2	488.787307	975.560061	0.063787	3.1178E-05	-0.16589	-8.1086E-05	-0.1021	-4.9907E-05	488.7871659609419	33.097	1.3867	33.266	32.892	34.278	0.16971					69	32	4	0	0	0	0.019577	4	2359	2344;2359;2371;2385		125.71	48.939	1	4664600			16805	5801	11407	11416	19423;19424;19425;19426	19424					0.07130323240414782
IINSSITTK	9	Unmodified	_IINSSITTK_					0	0	0		ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	ENSG00000163468|ENST00000295688|CCT3	ENSG00000163468|ENST00000295688|CCT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7873840332031	2	488.787307	975.560061	0.83265	0.00040699	-1.0256	-0.00050132	-0.19299	-9.4329E-05	488.7867652107256	33.068	1.5012	33.28	32.977	34.478	0.21168					69	35	4	0	0	0	0.05823	5	2371	2362;2371;2383;2395;2408		104.42	36.035	1	4442900			16806	5801	11407	11416	19427;19428;19429;19430;19431	19428					0.07130323240414782
IINTSRKTV	9	Unmodified	_IINTSRKTV_					0	0	0		nc|ENSG00000114126|Q14188-7|TFDP2;nc|ENSG00000114126|Q14188-6|TFDP2;nc|ENSG00000114126|Q14188-2|TFDP2;nc|ENSG00000114126|Q14188-3|TFDP2;nc|ENSG00000114126|Q14188-4|TFDP2;nc|ENSG00000114126|Q14188-5|TFDP2;nc|ENSG00000114126|Q14188-8|TFDP2;ENSG00000114126|ENST00000489671|TFDP2	nc|ENSG00000114126|Q14188-7|TFDP2	nc|ENSG00000114126|Q14188-7|TFDP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3145141601562	2	516.314023	1030.61349	1.791	0.00092474	-1.8271	-0.00094338	-0.036105	-1.8641E-05	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.78124	1	12135	12135		30.318	2.4355	1	24820000			16807	2761	11408	11417	19432	19432					0.09941120742928433
IINVKQFAKF	10	Unmodified	_IINVKQFAKF_					0	0	0		ENST00000460021.1_1_7:102994369-103002536:+|nuORF;ENSG00000161057|ENST00000292644|PSMC2	ENST00000460021.1_1_7:102994369-103002536:+|nuORF	ENST00000460021.1_1_7:102994369-103002536:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3655395507812	2	604.363516	1206.71248	3.6458	0.0022034	1.558	0.00094162	5.2038	0.003145	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.83456	1	12964	12964		32.812	0	1	5883900			16808	5629	11409	11418	19433	19433					0.11739143707836774
IIPARLKETNV	11	Unmodified	_IIPARLKETNV_					0	0	0			REV__ENSG00000158417|ENST00000289371|EIF5B	REV__ENSG00000158417|ENST00000289371|EIF5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.383056640625	2	627.382437	1252.75032	-0.21918	-0.00013751	0.64139	0.0004024	0.42221	0.00026489	627.382569161749	117.84	0.45222	117.77	117.68	118.13	-0.07531					39	17	3	0	0	0	0.78986	1	12647	12647		13.454	0.49486	1	1073400	+		16809	20604	11410	11419	19434	19434					0.1340560990265658
IIPCLLISCLT	11	Unmodified	_IIPCLLISCLT_					0	0	0		ENSG00000101204|ENST00000370263|CHRNA4;nc|ENSG00000101204|P43681-2|CHRNA4;nc|ENSG00000120903|Q15822-2|CHRNA2;ENSG00000120903|ENST00000407991|CHRNA2	ENSG00000101204|ENST00000370263|CHRNA4	ENSG00000101204|ENST00000370263|CHRNA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	594.8378295898438	2	594.840171	1187.66579	-0.60024	-0.00035705	-2.8761	-0.0017108	-3.4764	-0.0020679	594.8383419849733	69.788	0.58778	69.818	69.449	70.036	0.030495					43	30	2	0	0	0	0.69995	1	6589	6589		31.53	3.6476	1	867610			16810	1913	11411	11420	19435	19435					0.07946199770026396
IIPFIGYII	9	Unmodified	_IIPFIGYII_					0	0	0			REV__ENSG00000184999|ENST00000332793|SLC22A10	REV__ENSG00000184999|ENST00000332793|SLC22A10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8272705078125	2	524.825704	1047.63685	-0.038995	-2.0466E-05	2.2661	0.0011893	2.2272	0.0011689	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.7932	1	10761	10761		21.702	2.3424	1	26414000	+		16811	22723	11412	11421	19436	19436					0.1149416652756372
IIPFIGYII	9	Unmodified	_IIPFIGYII_					0	0	0			REV__ENSG00000184999|ENST00000332793|SLC22A10	REV__ENSG00000184999|ENST00000332793|SLC22A10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.826416015625	2	524.825704	1047.63685	0.8139	0.00042716	1.4579	0.00076513	2.2718	0.0011923	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.7932	1	10622	10622		21.702	1.2205	1	27719000	+		16812	22723	11412	11421	19437	19437					0.1149416652756372
IIPFRKHT	8	Unmodified	_IIPFRKHT_					0	0	0		nc|ENSG00000166974|Q15555-2|MAPRE2;ENSG00000166974|ENST00000300249|MAPRE2;ENST00000585592.1_1_18:32621503-32650351:+|nuORF;ENST00000538170.6_1_18:32621413-32677455:+|nuORF	nc|ENSG00000166974|Q15555-2|MAPRE2;ENST00000538170.6_1_18:32621413-32677455:+|nuORF	nc|ENSG00000166974|Q15555-2|MAPRE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30767822265625	2	506.308544	1010.60253	0.3191	0.00016156	0.67968	0.00034413	0.99877	0.00050569	506.3087607672274	46.383	1.7392	46.421	45.728	47.467	0.038181					61	47	2	0	0	0	0.85277	1	3380	3380		25.45	2.4077	1	157780			16813	6256;13460	11413	11422	19438	19438					0.09765763159327889
IIPFRKHT	8	Unmodified	_IIPFRKHT_					0	0	0		nc|ENSG00000166974|Q15555-2|MAPRE2;ENSG00000166974|ENST00000300249|MAPRE2;ENST00000585592.1_1_18:32621503-32650351:+|nuORF;ENST00000538170.6_1_18:32621413-32677455:+|nuORF	nc|ENSG00000166974|Q15555-2|MAPRE2;ENST00000538170.6_1_18:32621413-32677455:+|nuORF	nc|ENSG00000166974|Q15555-2|MAPRE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3089294433594	2	506.308544	1010.60253	-0.17528	-8.8744E-05	1.6214	0.00082091	1.4461	0.00073216	506.3094556948668	48.133	0.75604	48.04	47.615	48.371	-0.093178					26	19	2	0	0	0	0.86791	1	3627	3627		28.254	0	1	84185			16814	6256;13460	11413	11422	19439	19439					0.09765763159327889
IIPGRARHPSL	11	Unmodified	_IIPGRARHPSL_					0	0	0			REV__ENSG00000102878|ENST00000521374|HSF4;REV__ENST00000521314.5_1_16:67198707-67203685:+|nuORF	REV__ENST00000521314.5_1_16:67198707-67203685:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24713134765625	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.96	1	16.878	16.378	17.378	-0.0821								0	0	0	0.56276	1	191	191		19.263	3.2559	1		+		16815	17366;28115	11414	11423	19440	19440					0.12079296028105091
IIPIIISLK	9	Unmodified	_IIPIIISLK_					0	0	0		ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF	ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.28631591796875	2	505.354628	1008.6947	0.41796	0.00021122	-2.1447	-0.0010838	-1.7267	-0.00087262	505.3534387238267	53.382	1.4584	53.996	53.572	55.03	0.61436					58	34	3	0	0	0	0.20789	1	5524	5524		27.882	0	1	328360			16816	5124	11415	11424	19441	19441					0.19070428452982924
IIPKPGLL	8	Unmodified	_IIPKPGLL_					0	0	0		ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747802734375	2	425.791664	849.568775	0.35923	0.00015296	3.3664	0.0014334	3.7256	0.0015863	425.79301197476104	37.701	0.56939	38.014	37.705	38.274	0.31312					23	14	2	0	0	0	0.4196	1	3049	3049		23.037	8.3726	1	157840			16817	11038	11416	11425	19442	19442					0.13797341667577712
IIPPAPTKPD	10	Unmodified	_IIPPAPTKPD_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF	ENSG00000089006|ENST00000377759|SNX5	ENSG00000089006|ENST00000377759|SNX5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2711791992188	2	524.8055	1047.59645	0.83326	0.0004373	-1.0811	-0.00056735	-0.2478	-0.00013005	524.8048053139415	76.544	0.49895	76.943	76.658	77.157	0.39969					26	14	3	0	0	0	0.37624	1	8661	8661		31.53	6.0796	1	287240			16818	1602	11417	11426	19443	19443					0.07455200137133033
IIPPTLNDVLI	11	Unmodified	_IIPPTLNDVLI_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2467346191406	3	403.248068	1206.72238	-0.96192	-0.00038789	-1.9031	-0.00076743	-2.865	-0.0011553	403.2472281244655	104.88	3.5231	104.88	103.72	107.24	0					230	83	5	0	0	0	0.75921	1	10810	10810		23.378	6.2112	1	5402700			16819	4842	11418	11427	19444	19444					0.12728286922560983
IIPPTLNDVLI	11	Unmodified	_IIPPTLNDVLI_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3663330078125	2	604.368464	1206.72238	-0.16822	-0.00010167	-3.1319	-0.0018928	-3.3001	-0.0019945	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.73893	1	10843	10843		24.519	0.31644	1	47715000			16820	4842	11418	11427	19445	19445					0.12728286922560983
IIPPTLNDVLI	11	Unmodified	_IIPPTLNDVLI_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3662719726562	2	604.368464	1206.72238	-0.16845	-0.00010181	-2.2681	-0.0013707	-2.4365	-0.0014726	604.3669303033663	107.81	0.85171	107.81	107.02	107.87	0					52	20	4	0	0	0	0.7144	1	11170	11170		29.17	6.5904	1	11686000			16821	4842	11418	11427	19446	19446					0.12728286922560983
IIPPTLNDVLI	11	Unmodified	_IIPPTLNDVLI_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3667602539062	2	604.368464	1206.72238	-0.48563	-0.0002935	-2.8288	-0.0017096	-3.3144	-0.0020031	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.66929	3	11478	11319;11478;11538		36.447	6.0394	1	63350000			16822	4842	11418	11427	19447;19448;19449	19448					0.12728286922560983
IIPPTLNDVLI	11	Unmodified	_IIPPTLNDVLI_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3663940429688	2	604.368464	1206.72238	-0.11879	-7.1791E-05	-3.1394	-0.0018974	-3.2582	-0.0019692	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.7144	2	11334	11334;11381		29.17	1.0886	1	64334000			16823	4842	11418	11427	19450;19451	19450					0.12728286922560983
IIPPTLNDVLI	11	Unmodified	_IIPPTLNDVLI_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3662109375	2	604.368464	1206.72238	1.0484	0.00063359	-4.3277	-0.0026155	-3.2793	-0.0019819	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.69995	5	11034	11034;11046;11082;11142;11229		31.53	13.528	1	105850000			16824	4842	11418	11427	19452;19453;19454;19455;19456	19452					0.12728286922560983
IIPPTLNDVLI	11	Unmodified	_IIPPTLNDVLI_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2469482421875	3	403.248068	1206.72238	-1.7912	-0.0007223	-1.1732	-0.00047308	-2.9644	-0.0011954	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.77937	1	11210	11210		19.263	0.73163	1	20673000			16825	4842	11418	11427	19457	19457					0.12728286922560983
IIPPTLNDVLI	11	Unmodified	_IIPPTLNDVLI_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3665771484375	2	604.368464	1206.72238	0.90473	0.00054679	-4.275	-0.0025837	-3.3703	-0.0020369	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.7144	4	11062	11062;11158;11182;11231		29.17	8.2231	1	105740000			16826	4842	11418	11427	19458;19459;19460;19461	19458					0.12728286922560983
IIPPTLNDVLI	11	Unmodified	_IIPPTLNDVLI_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2467041015625	3	403.248068	1206.72238	0.73411	0.00029603	-3.7	-0.001492	-2.9659	-0.001196	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.69995	1	11147	11147		34.087	15.755	1	18617000			16827	4842	11418	11427	19462	19462					0.12728286922560983
IIPPTLNDVLI	11	Unmodified	_IIPPTLNDVLI_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3668823242188	2	604.368464	1206.72238	-1.2751	-0.0007706	-2.0171	-0.0012191	-3.2921	-0.0019897	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.66929	10	11204	10988;11000;11012;11024;11036;11060;11108;11204;11240;11266		36.447	4.9169	1	103250000			16828	4842	11418	11427	19463;19464;19465;19466;19467;19468;19469;19470;19471;19472	19470					0.12728286922560983
IIPPTLNDVLI	11	Unmodified	_IIPPTLNDVLI_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3668212890625	2	604.368464	1206.72238	-1.2751	-0.00077064	-1.2835	-0.00077571	-2.5586	-0.0015464	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.7434	1	12338	12338		23.523	3.5259	1	3346600			16829	4842	11418	11427	19473	19473					0.12728286922560983
IIQAISAQPNG	11	Unmodified	_IIQAISAQPNG_					0	0	0			REV__nc|ENSG00000118777|Q9UNQ0-2|ABCG2	REV__nc|ENSG00000118777|Q9UNQ0-2|ABCG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.3073120117188	2	556.308938	1110.60332	-0.91248	-0.00050762	-0.92721	-0.00051581	-1.8397	-0.0010234	556.3085207052586	90.73	2.9793	90.8	89.776	92.755	0.069328					115	70	3	0	0	0	0.70737	1	9277	9277		30.318	0	1	458320	+		16830	18326	11419	11428	19474	19474					0.05244513017692043
IIQAISAQPNG	11	Unmodified	_IIQAISAQPNG_					0	0	0			REV__nc|ENSG00000118777|Q9UNQ0-2|ABCG2	REV__nc|ENSG00000118777|Q9UNQ0-2|ABCG2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	556.308938	1110.60332	-0.91248	-0.00050762	-0.92721	-0.00051581	-1.8397	-0.0010234	556.3085207052586	90.73	2.9793	90.8	89.776	92.755	0.069328	0.069674	-0.00015916	NaN	30.318	115	70	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	458320	+		16831	18326	11419	11428							0.05244513017692043
IIQAYPTLP	9	Unmodified	_IIQAYPTLP_					0	0	0			REV__nc|ENSG00000072195|Q15772-1|SPEG	REV__nc|ENSG00000072195|Q15772-1|SPEG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.313232421875	2	508.294768	1014.57498	0.5704	0.00028993	-4.4133	-0.0022432	-3.8429	-0.0019533	508.2923463359799	61.552	0.62893	62.106	61.93	62.558	0.55386					27	14	3	0	0	0	0.20789	1	6621	6621		65.803	9.0821	1	217490	+		16832	16641	11420	11429	19475	19475					0.06827815108408686
IIQFVQCIL	9	Unmodified	_IIQFVQCIL_					0	0	0			REV__ENSG00000101331|ENST00000452892|CCM2L	REV__ENSG00000101331|ENST00000452892|CCM2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8150024414062	2	538.81227	1075.60999	-1.1684	-0.00062952	0.57845	0.00031168	-0.5899	-0.00031785	538.8125985367433	71.859	0.74835	72.244	71.875	72.624	0.38449					34	17	3	0	0	0	0.62081	1	8013	8013		45.952	7.1458	1	178790	+		16833	17267	11421	11430	19476	19476					0.0752073464473142
IIQKELKYMN	10	Unmodified	_IIQKELKYMN_					0	0	0			REV__nc|ENSG00000186628|A1L4K1-2|FSD2	REV__nc|ENSG00000186628|A1L4K1-2|FSD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3594360351562	2	640.357573	1278.70059	0.92817	0.00059436	1.0646	0.00068171	1.9928	0.0012761	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.8545	1	10417	10417		36.447	10.873	1	603720	+		16834	22869	11422	11431	19477	19477					0.07239158902348208
IIQNVKDVE	9	Unmodified	_IIQNVKDVE_					0	0	0			REV__ENSG00000166897|ENST00000402918|ELFN2;REV__ENSG00000225968|ENST00000424383|ELFN1	REV__ENSG00000166897|ENST00000402918|ELFN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.300048828125	2	529.298039	1056.58152	-0.42214	-0.00022344	4.0479	0.0021425	3.6257	0.0019191	529.2999611674875	58.584	1.1615	58.977	58.566	59.728	0.39209					60	27	3	0	0	0	0.64555	1	6138	6138		44.377	1.981	1	1279600	+		16835	21336;23742	11423	11432	19478	19478					0.0554970826913177
IIQQVQPGLQK	11	Unmodified	_IIQQVQPGLQK_					0	0	0			REV__ENSG00000138768|ENST00000514213|USO1	REV__ENSG00000138768|ENST00000514213|USO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3799438476562	2	626.374612	1250.73467	2.9096	0.0018225	4.2134	0.0026392	7.123	0.0044617	626.3771603031328	107.89	0.4325	107.86	107.51	107.94	-0.031487					32	10	4	0	0	0	0.70737	1	11964	11964		30.318	4.2543	1	11845000	+		16836	19504	11424	11433	19479	19479					0.11933323385619587
IIQRAYRR	8	Unmodified	_IIQRAYRR_					0	0	0		nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000136531|Q99250-2|SCN2A;ENSG00000136531|ENST00000375437|SCN2A	nc|ENSG00000144285|P35498-3|SCN1A	nc|ENSG00000144285|P35498-3|SCN1A	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.326904296875	2	538.327799	1074.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.31	1	114.34	113.84	114.84	0.026466								0	0	0	0.30252	1	12512	12512		19.36	2.8868	1				16837	4699	11425	11434	19480	19480					0.1067106879381754
IIRELLSM	8	Unmodified	_IIRELLSM_					0	0	0			REV__ENSG00000188981|ENST00000438480|MSANTD1	REV__ENSG00000188981|ENST00000438480|MSANTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7909851074219	2	487.788795	973.563038	0.6235	0.00030414	2.5998	0.0012681	3.2233	0.0015723	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.884	1	7950	7950		33.516	0	1	479320	+		16838	23048	11426	11435	19481	19481					0.07519875093601058
IIRESIHASLL	11	Unmodified	_IIRESIHASLL_					0	0	0			REV__ENSG00000166268|ENST00000552032|MYRFL	REV__ENSG00000166268|ENST00000552032|MYRFL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.9222412109375	3	417.918834	1250.73467	4.0685	0.0017003	4.0974	0.0017124	8.1659	0.0034127	417.9204504044182	105.51	2.6111	105.69	104.89	107.5	0.18647					199	86	4	0	0	0	0.7342	1	12921	12921		17.167	0	1	601650	+		16839	21274	11427	11436	19482	19482					0.11933323385619587
IIRGETAKAS	10	Unmodified	_IIRGETAKAS_					0	0	0			REV__ENST00000463884.1_1_X:153555730-153558035:+|nuORF	REV__ENST00000463884.1_1_X:153555730-153558035:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035278320312	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.86218	1	8490	8490		32.812	3.6629	1	9288900	+		16840	16121	11428	11437	19483	19483					0.07224530363259873
IIRGETAKAS	10	Unmodified	_IIRGETAKAS_					0	0	0			REV__ENST00000463884.1_1_X:153555730-153558035:+|nuORF	REV__ENST00000463884.1_1_X:153555730-153558035:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3035888671875	2	523.303655	1044.59276	-0.1734	-9.0741E-05	-0.15994	-8.3699E-05	-0.33334	-0.00017444	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.86218	1	9140	9140		32.812	3.6629	1	13808000	+		16841	16121	11428	11437	19484	19484					0.07224530363259873
IIRGETAKAS	10	Unmodified	_IIRGETAKAS_					0	0	0			REV__ENST00000463884.1_1_X:153555730-153558035:+|nuORF	REV__ENST00000463884.1_1_X:153555730-153558035:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.57924	1	8416	8416		51.193	5.2204	1	3566700	+		16842	16121	11428	11437	19485	19485					0.07224530363259873
IIRKKWFRY	9	Unmodified	_IIRKKWFRY_					0	0	0			REV__ENST00000378249.5_1_10:14977545-14995911:-|nuORF	REV__ENST00000378249.5_1_10:14977545-14995911:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26702880859375	3	437.267909	1308.7819	1.1681	0.00051075	-1.2795	-0.00055948	-0.11144	-4.8727E-05	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.7932	1	4660	4660		19.104	0.57247	1	4130900	+		16843	20299	11429	11438	19486	19486					0.13985647447270821
IIRKKWFRY	9	Unmodified	_IIRKKWFRY_					0	0	0			REV__ENST00000378249.5_1_10:14977545-14995911:-|nuORF	REV__ENST00000378249.5_1_10:14977545-14995911:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26678466796875	3	437.267909	1308.7819	1.089	0.00047619	-1.3781	-0.0006026	-0.28909	-0.00012641	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.7932	1	4842	4842		19.997	1.4657	1	2745300	+		16844	20299	11429	11438	19487	19487					0.13985647447270821
IIRKRVSVY	9	Unmodified	_IIRKRVSVY_					0	0	0			REV__ENSG00000204450|ENST00000533122|TRIM64	REV__ENSG00000204450|ENST00000533122|TRIM64	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3629760742188	2	567.361308	1132.70806	0.15466	8.7749E-05	3.9039	0.0022149	4.0585	0.0023027	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.77546	1	3239	3239		31.955	6.5047	1	1937600	+		16845	23073	11430	11439	19488	19488					0.14701679284939928
IIRLRSCTV	9	Unmodified	_IIRLRSCTV_					0	0	0		chr20:54154781-54157169|20|14.3|0.36|5.32|-|1|None,CYP24A1|1	chr20:54154781-54157169|20|14.3|0.36|5.32|-|1|None,CYP24A1|1	chr20:54154781-54157169|20|14.3|0.36|5.32|-|1|None,CYP24A1|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8170166015625	2	530.818418	1059.62228	0.70788	0.00037576	4.0096	0.0021284	4.7175	0.0025041	530.8204218995548	86.894	0.85542	87.043	86.741	87.596	0.14902					35	19	2	0	0	0	0.20789	1	8613	8613		29.15	0	1	703500			16846	366	11431	11440	19489	19489					0.09485771107756591
IIRLYFLVYL	10	Unmodified	_IIRLYFLVYL_					0	0	0		ENST00000549651.1_1_12:70636242-70636440:-|nuORF	ENST00000549651.1_1_12:70636242-70636440:-|nuORF	ENST00000549651.1_1_12:70636242-70636440:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2723388671875	3	438.272437	1311.79548	-0.96199	-0.00042161	2.1592	0.00094633	1.1972	0.00052472	438.2732841967114	107.57	0.99143	107.57	106.84	107.83	0					91	23	5	0	0	0	0.8486	1	11213	11213		18.262	1.0953	1	3871200			16847	13642	11432	11441	19490	19490					0.15205460435845453
IIRPGCAL	8	Unmodified	_IIRPGCAL_					0	0	0		ENSG00000196449|ENST00000373044|YRDC	ENSG00000196449|ENST00000373044|YRDC	ENSG00000196449|ENST00000373044|YRDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7510070800781	2	421.749473	841.484393	2.261	0.00095358	2.5621	0.0010806	4.8232	0.0020342	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.80127	1	7328	7328		16.705	0.23182	1	532850			16848	8056	11433	11442	19491	19491					0.057310675791541144
IIRPLTVYG	9	Unmodified	_IIRPLTVYG_					0	0	0		nc|ENSG00000111271|Q6JQN1-3|ACAD10;ENST00000508303.5_1_12:112159488-112186840:+|nuORF;nc|ENSG00000111271|Q6JQN1-2|ACAD10;ENST00000413681.7_1_12:112130513-112186840:+|nuORF;ENSG00000111271|ENST00000313698|ACAD10;nc|ENSG00000111271|Q6JQN1-5|ACAD10	nc|ENSG00000111271|Q6JQN1-3|ACAD10	nc|ENSG00000111271|Q6JQN1-3|ACAD10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.314208984375	2	516.316035	1030.61752	-0.63969	-0.00033028	-3.0425	-0.0015709	-3.6822	-0.0019012	516.3144152653146	102.55	1.0925	102.55	101.98	103.08	0					67	27	3	0	0	0	0.78851	1	10466	10466		28.254	1.4582	1	640710			16849	2568	11434	11443	19492	19492					0.10343210236624145
IIRPLTVYG	9	Unmodified	_IIRPLTVYG_					0	0	0		nc|ENSG00000111271|Q6JQN1-3|ACAD10;ENST00000508303.5_1_12:112159488-112186840:+|nuORF;nc|ENSG00000111271|Q6JQN1-2|ACAD10;ENST00000413681.7_1_12:112130513-112186840:+|nuORF;ENSG00000111271|ENST00000313698|ACAD10;nc|ENSG00000111271|Q6JQN1-5|ACAD10	nc|ENSG00000111271|Q6JQN1-3|ACAD10	nc|ENSG00000111271|Q6JQN1-3|ACAD10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3131713867188	2	516.316035	1030.61752	-0.25799	-0.00013321	-4.1781	-0.0021572	-4.4361	-0.0022904	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.7932	1	10646	10646		26.796	0.10319	1	82226000			16850	2568	11434	11443	19493	19493					0.10343210236624145
IIRPLTVYG	9	Unmodified	_IIRPLTVYG_					0	0	0		nc|ENSG00000111271|Q6JQN1-3|ACAD10;ENST00000508303.5_1_12:112159488-112186840:+|nuORF;nc|ENSG00000111271|Q6JQN1-2|ACAD10;ENST00000413681.7_1_12:112130513-112186840:+|nuORF;ENSG00000111271|ENST00000313698|ACAD10;nc|ENSG00000111271|Q6JQN1-5|ACAD10	nc|ENSG00000111271|Q6JQN1-3|ACAD10	nc|ENSG00000111271|Q6JQN1-3|ACAD10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3128662109375	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.7724	-0.0014314	-4.3342	-0.0022378	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.78536	2	10572	10551;10572		29.15	1.5614	1	66055000			16851	2568	11434	11443	19494;19495	19495					0.10343210236624145
IIRPPLLVNIV	11	Unmodified	_IIRPPLLVNIV_					0	0	0			REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.9169311523438	2	623.915916	1245.81728	0.92337	0.0005761	-0.11573	-7.2206E-05	0.80764	0.0005039	623.9158741950614	109.97	0.49825	110.05	109.81	110.31	0.073692					34	20	2	0	0	0	0.17564	1	11843	11843		14.865	7.6715	1	1648100	+		16852	19887	11435	11444	19496	19496					0.20420265184407072
IIRSPKSA	8	Unmodified	_IIRSPKSA_					0	0	0		ENSG00000151422|ENST00000281092|FER;ENST00000505323.1_1_5:108260361-108380497:+|nuORF;nc|ENSG00000151422|P16591-3|FER;nc|ENSG00000151422|P16591-2|FER	ENSG00000151422|ENST00000281092|FER	ENSG00000151422|ENST00000281092|FER	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2561950683594	2	436.271627	870.528701	-1.0082	-0.00043986	0.32233	0.00014062	-0.68589	-0.00029923	436.2702075954837	99.953	0.20021	99.953	99.844	100.04	0					6	4	2	0	0	0	0.4196	1	10122	10122		34.173	13.226	1	17578			16853	5116	11436	11445	19497	19497					0.08825794996994318
IIRTDLLQKPG	11	Unmodified	_IIRTDLLQKPG_					0	0	0		ENST00000568706.1_1_16:1834024-1837680:+|nuORF	ENST00000568706.1_1_16:1834024-1837680:+|nuORF	ENST00000568706.1_1_16:1834024-1837680:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3833618164062	2	627.382437	1252.75032	-0.21836	-0.00013699	0.10283	6.4512E-05	-0.11553	-7.2481E-05	627.382511862194	112.54	0.45316	112.48	112.28	112.73	-0.063889					31	15	4	0	0	0	0.70737	1	12235	12235		30.318	11.214	1	464930			16854	13966	11437	11446	19498	19498					0.1340560990265658
IIRTDLLQKPG	11	Unmodified	_IIRTDLLQKPG_					0	0	0		ENST00000568706.1_1_16:1834024-1837680:+|nuORF	ENST00000568706.1_1_16:1834024-1837680:+|nuORF	ENST00000568706.1_1_16:1834024-1837680:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3842163085938	2	627.382437	1252.75032	0.9271	0.00058165	-0.88209	-0.00055341	0.045014	2.8241E-05	627.3816034705419	112.22	0.3718	112.29	112.11	112.48	0.066025					31	13	4	0	0	0	0.72918	1	12085	12085		26.693	6.6961	1	1862300			16855	13966	11437	11446	19499	19499					0.1340560990265658
IIRTIVANPL	10	Unmodified	_IIRTIVANPL_					0	0	0			REV__ENST00000479871.1_1_9:116172333-116172573:-|nuORF	REV__ENST00000479871.1_1_9:116172333-116172573:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.3535766601562	2	555.355691	1108.69683	-0.45068	-0.00025029	-3.7051	-0.0020576	-4.1558	-0.0023079	555.3535032243398	101.3	2.2254	101.3	100.77	103	0					164	54	4	0	0	0	0.86218	1	10324	10324		32.812	0	1	2945100	+		16856	20105	11438	11447	19500	19500					0.14682857190791765
IIRTIVANPL	10	Unmodified	_IIRTIVANPL_					0	0	0			REV__ENST00000479871.1_1_9:116172333-116172573:-|nuORF	REV__ENST00000479871.1_1_9:116172333-116172573:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.353271484375	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.86587	1	10581	10581		29.17	1.2878	1	5963400	+		16857	20105	11438	11447	19501	19501					0.14682857190791765
IIRVLTARKTV	11	Unmodified	_IIRVLTARKTV_					0	0	0		ENSG00000136950|ENST00000353214|ARPC5L	ENSG00000136950|ENST00000353214|ARPC5L	ENSG00000136950|ENST00000353214|ARPC5L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8929443359375	2	635.421897	1268.82924	-1.1742	-0.00074611	-0.72652	-0.00046165	-1.9007	-0.0012078	635.4211697681018	105.51	0.23	105.58	105.49	105.72	0.073112					9	5	2	0	0	0	0.17387	1	11199	11199		23.523	0	1	160480			16858	4165	11439	11448	19502	19502					0.2055788192756154
IISAFFLF	8	Unmodified	_IISAFFLF_					0	0	0			REV__ENSG00000133116|ENST00000380099|KL	REV__ENSG00000133116|ENST00000380099|KL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2779541015625	2	479.275847	956.537141	0.22517	0.00010792	3.5632	0.0017077	3.7883	0.0018157	479.2774672255816	97.14	0.77187	97.53	97.073	97.845	0.39065					47	18	3	0	0	0	0.87807	1	11722	11722		31.579	1.7373	1	996060	+		16859	19060	11440	11449	19503	19503					0.05713348913604932
IISALSGLM	9	Unmodified	_IISALSGLM_					0	0	0			REV__nc|ENSG00000143493|Q9NVH2-4|INTS7	REV__nc|ENSG00000143493|Q9NVH2-4|INTS7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.7626647949219	2	452.762246	903.50994	-1.3226	-0.00059885	3.4873	0.0015789	2.1646	0.00098005	452.76390903784943	39.71	0.76369	39.666	39.287	40.051	-0.043697					44	17	3	0	0	0	0.78058	1	2848	2848		30.504	3.8107	1	126860	+		16860	19816	11441	11450	19504	19504					0.05432497310914641
IISCHNLMALI	11	Oxidation (M)	_IISCHNLM(Oxidation (M))ALI_		IISCHNLM(1)ALI		IISCHNLM(41)ALI	0	0	1			REV__ENSG00000212122|ENST00000390666|TSSK1B	REV__ENSG00000212122|ENST00000390666|TSSK1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.3303833007812	2	622.330501	1242.64645	0.8447	0.00052568	-1.6605	-0.0010334	-0.81578	-0.00050768	622.3295695689845	68.212	0.63405	68.596	68.313	68.947	0.38483					23	14	2	0	0	0	0.62614	1	7494	7494		41.427	7.2541	1	397160	+		16861	23599	11442	11451	19505	19505		363			0.03483243479126941
IISCHNLMALI	11	Oxidation (M)	_IISCHNLM(Oxidation (M))ALI_					0	0	1			REV__ENSG00000212122|ENST00000390666|TSSK1B	REV__ENSG00000212122|ENST00000390666|TSSK1B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	622.330501	1242.64645	0.8447	0.00052568	-1.6605	-0.0010334	-0.81578	-0.00050768	622.3295695689845	68.212	0.63405	68.596	68.313	68.947	0.38483	-0.006486	-0.00011873	NaN	41.427	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	397160	+		16862	23599	11442	11451				363			0.03483243479126941
IISCHNLMALI	11	Oxidation (M)	_IISCHNLM(Oxidation (M))ALI_					0	0	1			REV__ENSG00000212122|ENST00000390666|TSSK1B	REV__ENSG00000212122|ENST00000390666|TSSK1B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	622.330501	1242.64645	0.50096	0.00031176	-1.4217	-0.00088479	-0.92077	-0.00057303	622.329580931692	68.061	0.66068	68.609	68.409	69.07	0.54819	0.006486	0.00017842	NaN	41.427	29	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	337040	+		16863	23599	11442	11451				363			0.03483243479126941
IISELISSL	9	Unmodified	_IISELISSL_					0	0	0			REV__nc|ENSG00000147133|P21675-25|TAF1	REV__nc|ENSG00000147133|P21675-25|TAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7910461425781	2	487.792058	973.569563	0.54992	0.00026825	-3.6734	-0.0017919	-3.1235	-0.0015236	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.77546	1	8250	8250		31.955	0	1	633420	+		16864	20054	11443	11452	19506	19506					0.08172091525955238
IISFIEGIIA	10	Unmodified	_IISFIEGIIA_					0	0	0		ENST00000535398.5_1_13:111298395-111353838:-|nuORF;ENSG00000134905|ENST00000257347|CARS2	ENST00000535398.5_1_13:111298395-111353838:-|nuORF	ENST00000535398.5_1_13:111298395-111353838:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3276977539062	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.07	1	116.05	115.55	116.55	-0.02433								0	0	0	0.45132	1	12846	12846		21.96	0	1				16865	3970	11444	11453	19507	19507					0.09816657314013355
IISFIKNSKVF	11	Unmodified	_IISFIKNSKVF_					0	0	0			REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3929443359375	2	648.389731	1294.76491	2.6473	0.0017165	2.1996	0.0014262	4.8469	0.0031427	648.3910621231973	107.28	1.1649	107.25	106.75	107.91	-0.034134					106	27	4	0	0	0	0.69687	1	11948	11948		29.17	0	1	42480000	+		16866	25411	11445	11454	19508	19508					0.12931682050771087
IISFIKNSKVF	11	Unmodified	_IISFIKNSKVF_					0	0	0			REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3927001953125	2	648.389731	1294.76491	1.8787	0.0012181	2.9514	0.0019136	4.8301	0.0031318	648.3915145457087	107.1	1.2973	107.13	106.67	107.97	0.035622					111	30	4	0	0	0	0.64964	1	11807	11807		44.377	12.847	1	42934000	+		16867	25411	11445	11454	19509	19509					0.12931682050771087
IISFIKNSKVF	11	Unmodified	_IISFIKNSKVF_					0	0	0			REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3926391601562	2	648.389731	1294.76491	1.6039	0.00104	3.2401	0.0021008	4.844	0.0031408	648.3917432358439	106.08	2.1363	106.23	104.51	106.65	0.14843					114	53	4	0	0	0	0.66929	2	11305	11305;11316		36.447	5.4664	1	52760000	+		16868	25411	11445	11454	19510;19511	19510					0.12931682050771087
IISFIKNSKVF	11	Unmodified	_IISFIKNSKVF_					0	0	0			REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.392822265625	2	648.389731	1294.76491	1.6039	0.00104	3.3244	0.0021555	4.9283	0.0031955	648.3917676742469	106.97	1.0935	107.11	106.64	107.73	0.13866					101	26	4	0	0	0	0.66929	1	11532	11532		36.447	8.3653	1	58516000	+		16869	25411	11445	11454	19512	19512					0.12931682050771087
IISFIKNSKVF	11	Unmodified	_IISFIKNSKVF_					0	0	0			REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3926391601562	2	648.389731	1294.76491	0.94475	0.00061257	3.7814	0.0024518	4.7262	0.0030644	648.3921194247092	106.15	2.119	106.24	104.58	106.7	0.099007					110	52	4	0	0	0	0.64498	1	11332	11332		39.253	13.189	1	47497000	+		16870	25411	11445	11454	19513	19513					0.12931682050771087
IISFIKNSKVF	11	Unmodified	_IISFIKNSKVF_					0	0	0			REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3922729492188	2	648.389731	1294.76491	0.94475	0.00061257	4.1927	0.0027185	5.1374	0.0033311	648.3923298671006	107.11	0.98898	107.2	106.69	107.68	0.091255					92	23	4	0	0	0	0.66929	1	11428	11428		36.447	6.129	1	51640000	+		16871	25411	11445	11454	19514	19514					0.12931682050771087
IISFIKNSKVF	11	Unmodified	_IISFIKNSKVF_					0	0	0			REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.392578125	2	648.389731	1294.76491	0.94475	0.00061257	3.4353	0.0022274	4.38	0.00284	648.3919146413928	107.84	0.34233	107.93	107.67	108.01	0.084412					32	8	4	0	0	0	0.69995	2	11561	11561;11573		31.53	3.4483	1	40942000	+		16872	25411	11445	11454	19515;19516	19515					0.12931682050771087
IISIKKDMA	9	Unmodified	_IISIKKDMA_					0	0	0			REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8037414550781	2	509.801903	1017.58925	-0.054506	-2.7787E-05	3.6278	0.0018495	3.5733	0.0018217	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.77546	1	8472	8472		31.955	1.4512	1	828920	+		16873	27204	11446	11455	19517	19517					0.08116144265056846
IISIKKDMA	9	Unmodified	_IISIKKDMA_					0	0	0			REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8043212890625	2	509.801903	1017.58925	-0.054339	-2.7702E-05	3.6212	0.0018461	3.5668	0.0018184	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.71772	1	8585	8585		39.253	0.23134	1	2906900	+		16874	27204	11446	11455	19518	19518					0.08116144265056846
IISIKKDMA	9	Unmodified	_IISIKKDMA_					0	0	0			REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80419921875	2	509.801903	1017.58925	-0.053466	-2.7257E-05	4.4244	0.0022556	4.371	0.0022283	509.80400037204134	99.545	1.2612	99.586	99.14	100.4	0.041107					66	29	3	0	0	0	0.7932	1	10567	10567		24.203	2.5004	1	418130	+		16875	27204	11446	11455	19519	19519					0.08116144265056846
IISIKKDMA	9	Unmodified	_IISIKKDMA_					0	0	0			REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.80352783203125	2	509.801903	1017.58925	0.9788	0.00049899	2.5641	0.0013072	3.5429	0.0018062	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.74721	1	8700	8700		37.159	6.8414	1	979740	+		16876	27204	11446	11455	19520	19520					0.08116144265056846
IISIKKDMA	9	Unmodified	_IISIKKDMA_					0	0	0			REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.80401611328125	2	509.801903	1017.58925	2.6797	0.0013661	1.8365	0.00093626	4.5162	0.0023024	509.80259900501994	99.442	1.3968	99.388	98.868	100.26	-0.053741					77	32	4	0	0	0	0.69624	2	10787	10753;10787		40.778	8.0096	1	480070	+		16877	27204	11446	11455	19521;19522	19522					0.08116144265056846
IISIKKDMA	9	Unmodified	_IISIKKDMA_					0	0	0			REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8037414550781	2	509.801903	1017.58925	0.075306	3.8391E-05	3.4995	0.001784	3.5748	0.0018224	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.78536	1	8496	8496		29.15	1.2673	1	958280	+		16878	27204	11446	11455	19523	19523					0.08116144265056846
IISIKKDMA	9	Unmodified	_IISIKKDMA_					0	0	0			REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	REV__ENST00000470112.1_1_3:71345427-71345502:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8040771484375	2	509.801903	1017.58925	-0.38177	-0.00019462	3.8836	0.0019799	3.5019	0.0017853	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.7932	1	8090	8090		17.365	0.89182	1	948010	+		16879	27204	11446	11455	19524	19524					0.08116144265056846
IISILGIFYRA	11	Unmodified	_IISILGIFYRA_					0	0	0			REV__ENSG00000104290|ENST00000240093|FZD3	REV__ENSG00000104290|ENST00000240093|FZD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.3861083984375	2	633.384448	1264.75434	0.12605	7.984E-05	1.4207	0.00089988	1.5468	0.00097972	633.3850253113031	51.101	1.496	51.017	50.491	51.987	-0.084538					79	43	3	0	0	0	0.75779	1	4112	4112		22.58	0	1	224090	+		16880	17444	11447	11456	19525	19525					0.13255699396381715
IISILIPIRIV	11	Unmodified	_IISILIPIRIV_					0	0	0			REV__nc|ENSG00000106018|P41587-2|VIPR2	REV__nc|ENSG00000106018|P41587-2|VIPR2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.29010009765625	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.963	1	71.923	71.423	72.423	-0.040131								0	0	0	0.56276	1	7015	7015		14.694	0.60766	1		+		16881	29762	11448	11457	19526	19526					0.23885722361251283
IISILIPIRIV	11	Unmodified	_IISILIPIRIV_					0	0	0			REV__nc|ENSG00000106018|P41587-2|VIPR2	REV__nc|ENSG00000106018|P41587-2|VIPR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.4317016601562	2	625.433941	1248.85333	0.89312	0.00055859	-4.3604	-0.0027271	-3.4673	-0.0021685	625.43101086713	108.79	0.63013	108.82	108.61	109.24	0.034355					76	30	3	0	0	0	0.78391	1	11966	11966		0.82809	0	1	3022200	+		16882	29762	11448	11457	19527	19527					0.23885722361251283
IISLILSAS	9	Unmodified	_IISLILSAS_					0	0	0			REV__ENSG00000163507|ENST00000295746|CIP2A	REV__ENSG00000163507|ENST00000295746|CIP2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7878723144531	2	458.789318	915.564084	-0.56463	-0.00025905	-2.7803	-0.0012756	-3.3449	-0.0015346	458.7879697200244	92.862	1.6326	93.312	92.732	94.365	0.44989					129	38	4	0	0	0	0.78058	1	11063	11063		30.504	0	1	6441800	+		16883	20925	11449	11458	19528	19528					0.10292412734133904
IISLSSDPL	9	Unmodified	_IISLSSDPL_					0	0	0		nc|ENSG00000149970|Q8WXI2-4|CNKSR2;nc|ENSG00000149970|Q8WXI2-2|CNKSR2;nc|ENSG00000149970|Q8WXI2-5|CNKSR2;ENSG00000149970|ENST00000379510|CNKSR2	nc|ENSG00000149970|Q8WXI2-4|CNKSR2	nc|ENSG00000149970|Q8WXI2-4|CNKSR2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.76715087890625	2	472.768583	943.522613	-1.1355	-0.00053681	-1.706	-0.00080653	-2.8414	-0.0013433	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.76996	1	7845	7845		33.516	1.9367	1	292450			16884	5057	11450	11459	19529	19529					0.04859231974796785
IISLVMPIC	9	Unmodified	_IISLVMPIC_					0	0	0		ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7801208496094	2	494.782124	987.549696	-0.85772	-0.00042438	-2.6539	-0.0013131	-3.5116	-0.0017375	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.7932	1	8696	8696		25.45	1.2474	1	737700			16885	4002	11451	11460	19530	19530					0.055423009899755016
IISRSPFVL	9	Unmodified	_IISRSPFVL_					0	0	0			REV__ENST00000529422.1_1_19:10461631-10461802:-|nuORF	REV__ENST00000529422.1_1_19:10461631-10461802:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.313232421875	2	516.316035	1030.61752	-0.046988	-2.426E-05	-3.225	-0.0016651	-3.2719	-0.0016894	516.3143957799225	103.64	1.2184	103.63	103.07	104.29	-0.0035706					70	29	3	0	0	0	0.77244	1	11155	11155		32.812	0.85756	1	638740	+		16886	28267	11452	11461	19531	19531					0.10343210236646883
IISSIVSR	8	Unmodified	_IISSIVSR_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2;nc|ENSG00000188738|Q5CZC0-2|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7707824707031	2	437.77146	873.528367	-2.0028	-0.00087676	0.34136	0.00014944	-1.6614	-0.00072733	437.7717477191302	40.214	2.554	40.591	39.609	42.163	0.3765					138	67	4	0	0	0	0.884	1	3293	3293		33.516	3.0119	1	10119000			16887	7954	11453	11462	19532	19532					0.08654375277149029
IISSLPSIV	9	Unmodified	_IISSLPSIV_					0	0	0		ENSG00000080608|ENST00000397885|PUM3	ENSG00000080608|ENST00000397885|PUM3	ENSG00000080608|ENST00000397885|PUM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.7906188964844	2	464.789318	927.564084	-0.072724	-3.3801E-05	3.0915	0.0014369	3.0188	0.0014031	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.78058	1	2093	2093		30.504	5.0535	1	297050			16888	1448	11454	11463	19533	19533					0.0974041273415196
IISSLTGKGR	10	Unmodified	_IISSLTGKGR_					0	0	0			REV__nc|ENSG00000101639|Q8TEP8-1|CEP192	REV__nc|ENSG00000101639|Q8TEP8-1|CEP192	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3128662109375	2	516.314023	1030.61349	3.1012	0.0016012	-3.1554	-0.0016292	-0.054235	-2.8002E-05	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.86763	1	13262	13262		26.693	2.4902	1	1162600	+		16889	17293	11455	11464	19534	19534					0.0994112074295117
IISTVIDPMA	10	Unmodified	_IISTVIDPMA_					0	0	0		ENST00000396033.6_1_10:33200822-33200915:-|nuORF	ENST00000396033.6_1_10:33200822-33200915:-|nuORF	ENST00000396033.6_1_10:33200822-33200915:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2935180664062	2	530.291368	1058.56818	-0.034361	-1.8221E-05	3.9342	0.0020863	3.8998	0.002068	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.74274	1	9342	9342		42.396	0.96952	1	1852900			16890	11106	11456	11465	19535	19535					0.04124134165522264
IISTVIDPMA	10	Unmodified	_IISTVIDPMA_					0	0	0		ENST00000396033.6_1_10:33200822-33200915:-|nuORF	ENST00000396033.6_1_10:33200822-33200915:-|nuORF	ENST00000396033.6_1_10:33200822-33200915:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2933349609375	2	530.291368	1058.56818	-0.066725	-3.5384E-05	3.8245	0.0020281	3.7578	0.0019927	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.74274	2	9079	9079;9091		42.396	5.9494	1	2084800			16891	11106	11456	11465	19536;19537	19536					0.04124134165522264
IISVGLFM	8	Unmodified	_IISVGLFM_					0	0	0			REV__nc|ENSG00000183023|P32418-3|SLC8A1	REV__nc|ENSG00000183023|P32418-3|SLC8A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.25579833984375	2	440.254057	878.493561	-1.3621	-0.00059965	4.1132	0.0018109	2.7511	0.0012112	440.25581826564206	75.456	0.61463	75.544	75.272	75.886	0.087631					27	15	3	0	0	0	0.87276	1	7000	7000		29.842	0.69198	1	108430	+		16892	22568	11457	11466	19538	19538					0.04945416144835235
IISVGLFM	8	Unmodified	_IISVGLFM_					0	0	0			REV__nc|ENSG00000183023|P32418-3|SLC8A1	REV__nc|ENSG00000183023|P32418-3|SLC8A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25555419921875	2	440.254057	878.493561	-0.8618	-0.00037941	3.7524	0.001652	2.8906	0.0012726	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.85277	1	6797	6797		25.45	2.4077	1	1365500	+		16893	22568	11457	11466	19539	19539					0.04945416144835235
IISVRDGVSAS	11	Unmodified	_IISVRDGVSAS_					0	0	0			REV__nc|ENSG00000211633|A0A075B6H8|IGKV1D-42	REV__nc|ENSG00000211633|A0A075B6H8|IGKV1D-42	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.305908203125	2	552.306395	1102.59824	2.2801	0.0012593	-2.1564	-0.001191	0.1237	6.8322E-05	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.58425	1	9968	9968		45.972	6.7194	1	1797400	+		16894	30178	11458	11467	19540	19540					0.05104209155092576
IITDLLLVG	9	Unmodified	_IITDLLLVG_					0	0	0			REV__nc|ENSG00000040487|Q6ZP29-2|SLC66A1	REV__nc|ENSG00000040487|Q6ZP29-2|SLC66A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8052673339844	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.77546	1	2393	2393		31.955	6.5047	1	336090	+		16895	16317	11459	11468	19541	19541					0.11580985768239316
IITDLLLVG	9	Unmodified	_IITDLLLVG_					0	0	0			REV__nc|ENSG00000040487|Q6ZP29-2|SLC66A1	REV__nc|ENSG00000040487|Q6ZP29-2|SLC66A1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.80718994140625	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.279	1	39.226	38.726	39.726	-0.052731								0	0	0	0.31828	1	2393	2393		24.203	0	1		+		16896	16317	11459	11468	19542	19542					0.11580985768239316
IITDMAKKEW	10	Unmodified	_IITDMAKKEW_					0	0	0		ENST00000555351.1_1_14:97263783-97319303:+|nuORF;ENSG00000100749|ENST00000216639|VRK1	ENST00000555351.1_1_14:97263783-97319303:+|nuORF	ENST00000555351.1_1_14:97263783-97319303:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	617.826904296875	2	617.828649	1233.64274	1.2049	0.00074439	-3.7754	-0.0023326	-2.5706	-0.0015882	617.8263056713324	78.046	0.53503	78.173	77.93	78.465	0.12695					37	16	3	0	0	0	0.70553	1	7342	7342		44.377	2.9506	1	252600			16897	1867	11460	11469	19543	19543					0.03526896976927674
IITDVPIEI	9	Unmodified	_IITDVPIEI_					0	0	0		ENSG00000240720|ENST00000458448|LRRD1	ENSG00000240720|ENST00000458448|LRRD1	ENSG00000240720|ENST00000458448|LRRD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3142395019531	2	506.799883	1011.58521	-0.48099	-0.00024376	3.777	0.0019142	3.296	0.0016704	506.80184692532947	54.973	1.3271	55.028	54.901	56.228	0.055614					77	49	2	0	0	0	0.20789	1	4732	4732		37.159	9.2769	1	160190			16898	8783	11461	11470	19544	19544					0.07988378043000921
IITGRLCW	8	Unmodified	_IITGRLCW_					0	0	0			REV__ENST00000296255.7_1_3:128356748-128363813:-|nuORF	REV__ENST00000296255.7_1_3:128356748-128363813:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.2698669433594	2	481.26803	960.521507	-0.22683	-0.00010917	-4.2221	-0.002032	-4.449	-0.0021412	481.26595108166003	31.627	0.53519	31.576	31.337	31.872	-0.051031					18	11	2	0	0	0	0.81548	1	1823	1823		20.482	3.1169	1	40642	+		16899	24706	11462	11471	19545	19545					0.03966739124916785
IITIGHSRLNK	11	Unmodified	_IITIGHSRLNK_					0	0	0		ENSG00000114745|ENST00000319283|GORASP1;ENST00000470910.5_1_3:39142410-39149053:-|nuORF;ENST00000493851.5_1_3:39143979-39149053:-|nuORF;nc|ENSG00000114745|Q9BQQ3-2|GORASP1;ENST00000441302.6_1_3:39142056-39149053:-|nuORF	ENSG00000114745|ENST00000319283|GORASP1	ENSG00000114745|ENST00000319283|GORASP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.9224853515625	3	417.922578	1250.7459	-0.96194	-0.00040202	0.30568	0.00012775	-0.65627	-0.00027427	417.922646807868	105.95	2.4445	105.95	105.29	107.73	0					194	56	4	0	0	0	0.77061	1	10964	10964		11.455	0	1	9358100			16900	2788	11463	11472	19546	19546					0.13056145479754377
IITLMSVFKR	10	Unmodified	_IITLMSVFKR_					0	0	0		ENST00000296490.7_1_3:52291276-52291372:-|nuORF	ENST00000296490.7_1_3:52291276-52291372:-|nuORF	ENST00000296490.7_1_3:52291276-52291372:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.36767578125	2	604.365201	1206.71585	-1.2751	-0.00077064	4.1148	0.0024869	2.8397	0.0017162	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85958	1	12206	12206		15.642	1.5047	1	3346600			16901	9735	11464	11473	19547	19547					0.12076070490184065
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3267822265625	2	538.327131	1074.63971	-0.54037	-0.0002909	0.19001	0.00010229	-0.35037	-0.00018861	538.3271646052639	101.22	3.8034	101.22	100.55	104.36	0					314	93	6	0	0	0	0.80179	4	10399	10341;10399;10419;10487		39.253	3.6476	1	48186000			16902	13519	11465	11474	19548;19549;19550;19551	19549					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3258056640625	2	538.327131	1074.63971	-0.51595	-0.00027775	1.3255	0.00071353	0.80952	0.00043579	538.3278592314944	105.99	1.6493	105.99	105.37	107.02	0					100	37	3	0	0	0	0.86225	1	10961	10961		32.751	4.8683	1	642860			16903	13519	11465	11474	19552	19552					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3268432617188	2	538.327131	1074.63971	-0.15636	-8.4174E-05	-0.2849	-0.00015337	-0.44126	-0.00023754	538.3269075153179	101.16	2.8222	101.19	100.44	103.26	0.031036					310	67	7	0	0	0	0.80179	3	10922	10731;10922;10945		39.253	8.7492	1	74691000			16904	13519	11465	11474	19553;19554;19555	19554					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3267211914062	2	538.327131	1074.63971	-0.15533	-8.3621E-05	0.50106	0.00026973	0.34572	0.00018611	538.3273537952052	104.74	1.1783	104.72	104.15	105.33	-0.014809					78	27	4	0	0	0	0.8505	1	11353	11353		19.104	1.7386	1	887790			16905	13519	11465	11474	19556	19556					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3274536132812	2	538.327131	1074.63971	3.4335	0.0018483	-3.8831	-0.0020904	-0.44957	-0.00024201	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.86272	1	10920	10920		24.519	8.046	1	75550000			16906	13519	11465	11474	19557	19557					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3272094726562	2	538.327131	1074.63971	1.246	0.00067076	-1.73	-0.00093129	-0.48397	-0.00026053	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.66675	10	11229	10822;10834;10978;11062;11074;11122;11135;11157;11180;11229		46.457	18.662	1	76567000			16907	13519	11465	11474	19558;19559;19560;19561;19562;19563;19564;19565;19566;19567	19567					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.325439453125	2	538.327131	1074.63971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.93	1	113.96	113.46	114.46	0.027321								0	0	0	0.45132	1	12462	12462		31.53	8.4873	1				16908	13519	11465	11474	19568	19568					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3280639648438	2	538.327131	1074.63971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.41	1	114.43	113.93	114.93	0.026466								0	0	0	0.45132	1	12525	12525		18.262	0.89712	1				16909	13519	11465	11474	19569	19569					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3269653320312	2	538.327131	1074.63971	0.070633	3.8024E-05	-0.68681	-0.00036973	-0.61617	-0.0003317	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.82886	3	10495	10495;10507;10699		37.812	5.8567	1	109840000			16910	13519	11465	11474	19570;19571;19572	19570					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3270263671875	2	538.327131	1074.63971	0.84014	0.00045227	-1.3812	-0.00074354	-0.54107	-0.00029127	538.326371026974	100.85	3.8483	100.99	100.33	104.18	0.14352					341	94	6	0	0	0	0.57924	4	10501	10501;10572;10678;10824		51.193	20.689	1	92159000			16911	13519	11465	11474	19573;19574;19575;19576	19573					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3272094726562	2	538.327131	1074.63971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.55	1	103.68	103.18	104.18	0.12622								0	0	0	0.45132	1	10958	10958		31.53	4.8369	1				16912	13519	11465	11474	19577	19577					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.32666015625	2	538.327131	1074.63971	-1.4901	-0.00080219	0.85571	0.00046065	-0.63444	-0.00034153	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.80179	5	10488	10476;10488;10536;10559;10761		39.253	2.8061	1	93615000			16913	13519	11465	11474	19578;19579;19580;19581;19582	19579					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.327392578125	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.70553	4	12092	12092;12140;12692;12893		44.377	11.565	1	4041000			16914	13519	11465	11474	19583;19584;19585;19586	19583					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3273315429688	2	538.327131	1074.63971	1.3454	0.00072427	-1.7871	-0.00096205	-0.4417	-0.00023778	538.3260218082069	100.6	2.6544	100.9	100.26	102.91	0.2999					222	70	6	0	0	0	0.76096	3	12149	12149;12185;12233		41.427	3.6424	1	18713000			16915	13519	11465	11474	19587;19588;19589	19587					0.10537389914406958
IITLRKSSAS	10	Unmodified	_IITLRKSSAS_					0	0	0		ENST00000563675.5_1_16:19421837-19441949:+|nuORF;ENST00000542583.6_1_16:19429386-19441949:+|nuORF;ENST00000541464.5_3_16:19421875-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	ENST00000563675.5_1_16:19421837-19441949:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3270263671875	2	538.327131	1074.63971	1.8602	0.0010014	-2.2278	-0.0011993	-0.3676	-0.00019789	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.67571	3	12240	12240;12310;12346		45.972	7.1661	1	19391000			16916	13519	11465	11474	19590;19591;19592	19590					0.10537389914406958
IITLSELVYI	10	Unmodified	_IITLSELVYI_					0	0	0			REV__ENSG00000128519|ENST00000249284|TAS2R16	REV__ENSG00000128519|ENST00000249284|TAS2R16	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3543090820312	2	582.34974	1162.68493	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.86	1	112.84	112.34	113.34	-0.024811								0	0	0	0.45132	1	12478	12478		37.159	4.3467	1		+		16917	18776	11466	11475	19593	19593					0.11009195656947668
IITLSELVYI	10	Unmodified	_IITLSELVYI_					0	0	0			REV__ENSG00000128519|ENST00000249284|TAS2R16	REV__ENSG00000128519|ENST00000249284|TAS2R16	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3546752929688	2	582.34974	1162.68493	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.32	1	118.3	117.8	118.8	-0.024208								0	0	0	0.45132	1	13105	13105		15.642	0.77694	1		+		16918	18776	11466	11475	19594	19594					0.11009195656947668
IITLVDKVM	9	Unmodified	_IITLVDKVM_					0	0	0			REV__CON__Q3SZ57	REV__CON__Q3SZ57	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.31396484375	2	516.312103	1030.60965	-0.047196	-2.4368E-05	3.3567	0.0017331	3.3095	0.0017087	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.78058	1	10497	10497		30.504	0	1	63062000	+	+	16919	16013	11467	11476	19595	19595					0.09557314924882121
IITMKQEPP	9	Unmodified	_IITMKQEPP_					0	0	0			REV__ENST00000395720.2_2_15:65243255-65243303:+|nuORF	REV__ENST00000395720.2_2_15:65243255-65243303:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.7927856445312	2	528.791535	1055.56852	0.32349	0.00017106	3.3103	0.0017505	3.6338	0.0019215	528.7931534014222	36.129	0.71097	36.069	35.752	36.463	-0.060337					57	20	4	0	0	0	0.64922	1	1939	1939		44.117	3.5442	1	620290	+		16920	26121	11468	11477	19596	19596					0.04295553885413028
IITVETKLKSD	11	Unmodified	_IITVETKLKSD_					0	0	0			REV__nc|ENSG00000079691|Q5VZK9-2|CARMIL1	REV__nc|ENSG00000079691|Q5VZK9-2|CARMIL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	623.8712768554688	2	623.866285	1245.71802	2.9437	0.0018365	3.6258	0.002262	6.5694	0.0040985	623.8684944495797	104.68	1.864	104.64	104.19	106.05	-0.04039					120	44	4	0	0	0	0.77421	1	11556	11556		16.717	0.24424	1	1509700	+		16921	16790	11469	11478	19597	19597					0.10498777708994567
IITVLWVM	8	Unmodified	_IITVLWVM_					0	0	0			REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7906799316406	2	487.790807	973.56706	-1.0481	-0.00051127	0.8293	0.00040452	-0.21883	-0.00010674	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.83466	1	7990	7990		23.037	0	1	1176800	+		16922	19595	11470	11479	19598	19598					0.07921964587308139
IITVLWVM	8	Unmodified	_IITVLWVM_					0	0	0			REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7907409667969	2	487.790807	973.56706	0.84663	0.00041298	-1.2469	-0.00060822	-0.40027	-0.00019525	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.90024	2	8519	8519;8603		41.208	9.6295	1	2238600	+		16923	19595	11470	11479	19599;19600	19599					0.07921964587308139
IITVLWVM	8	Unmodified	_IITVLWVM_					0	0	0			REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7905578613281	2	487.790807	973.56706	-1.4694	-0.00071678	0.88841	0.00043336	-0.58103	-0.00028342	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.87276	1	8211	8211		29.842	1.5873	1	607090	+		16924	19595	11470	11479	19601	19601					0.07921964587308139
IITVLWVM	8	Unmodified	_IITVLWVM_					0	0	0			REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79046630859375	2	487.790807	973.56706	-1.3135	-0.00064074	0.91911	0.00044833	-0.39444	-0.0001924	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.87276	2	8419	8419;8621		29.842	0	1	2239000	+		16925	19595	11470	11479	19602;19603	19602					0.07921964587308139
IITVLWVM	8	Unmodified	_IITVLWVM_					0	0	0			REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7904968261719	2	487.790807	973.56706	-0.70733	-0.00034503	0.27543	0.00013435	-0.4319	-0.00021068	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.87807	3	8250	8106;8238;8250		41.208	9.6295	1	2348200	+		16926	19595	11470	11479	19604;19605;19606	19606					0.07921964587308139
IITVLWVM	8	Unmodified	_IITVLWVM_					0	0	0			REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79022216796875	2	487.790807	973.56706	-1.4525	-0.00070854	0.77341	0.00037726	-0.67914	-0.00033128	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.90024	1	7808	7808		39.021	0	1	503530	+		16927	19595	11470	11479	19607	19607					0.07921964587308139
IITVLWVM	8	Unmodified	_IITVLWVM_					0	0	0			REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7907409667969	2	487.790807	973.56706	-1.5393	-0.00075085	1.1332	0.00055277	-0.40607	-0.00019808	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.87276	2	8067	8067;8271		29.842	0	1	1760400	+		16928	19595	11470	11479	19608;19609	19608					0.07921964587308139
IITYCSPLY	9	Unmodified	_IITYCSPLY_					0	0	0		ENSG00000174502|ENST00000367135|SLC26A9;nc|ENSG00000174502|Q7LBE3-2|SLC26A9	ENSG00000174502|ENST00000367135|SLC26A9	ENSG00000174502|ENST00000367135|SLC26A9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.772705078125	2	536.772811	1071.53107	-0.55748	-0.00029924	-2.5772	-0.0013834	-3.1347	-0.0016826	536.7712654963615	70.523	0.64537	71.07	70.762	71.408	0.54756					26	15	2	0	0	0	0.5393	1	7883	7883		50.025	0	1	550880			16929	6942	11471	11480	19610	19610					-0.0018353738021232857
IIVAGRAR	8	Unmodified	_IIVAGRAR_					0	0	0			REV__ENST00000257829.7_1_11:34127254-34129795:+|nuORF	REV__ENST00000257829.7_1_11:34127254-34129795:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2614440917969	2	428.279786	854.54502	-1.8496	-0.00079216	-3.7498	-0.001606	-5.5994	-0.0023981	428.2786310216418	90.913	0.6807	91.093	90.515	91.196	0.18029					23	16	2	0	0	0	0.4196	1	9093	9093		12.959	0	1	303010	+		16930	24348	11472	11481	19611	19611					0.11192920953737939
IIVAKHQFRI	10	Unmodified	_IIVAKHQFRI_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9221496582031	3	408.92403	1223.75026	-1.9234	-0.00078652	-2.4321	-0.00099455	-4.3555	-0.0017811	408.9230151046432	104.46	2.832	104.56	103.59	106.42	0.093857					212	70	5	0	0	0	0.85694	1	11058	11058		20.837	7.3831	1	2027500			16931	5333	11473	11482	19612	19612					0.14733654693304743
IIVALKSE	8	Unmodified	_IIVALKSE_					0	0	0		nc|ENSG00000171302|Q8WVQ1-3|CANT1;ENSG00000171302|ENST00000392446|CANT1	nc|ENSG00000171302|Q8WVQ1-3|CANT1	nc|ENSG00000171302|Q8WVQ1-3|CANT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7747497558594	2	436.776211	871.537869	-1.8179	-0.00079401	-1.324	-0.00057831	-3.1419	-0.0013723	436.77554812926275	90.686	2.546	90.866	90.262	92.808	0.18029					181	60	4	0	0	0	0.87922	1	9039	9039		31.955	1.4512	1	8965000			16932	6655	11474	11483	19613	19613					0.09696143562666748
IIVEEEEAK	9	Unmodified	_IIVEEEEAK_					0	0	0			REV__ENSG00000198932|ENST00000537097|GPRASP1	REV__ENSG00000198932|ENST00000537097|GPRASP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.3070678710938	2	530.282054	1058.54956	0.18711	9.9221E-05	-1.8549	-0.0009836	-1.6678	-0.00088438	530.2807528659931	62.983	2.1265	63.537	62.559	64.686	0.55449					59	49	2	0	0	0	0.20789	1	6842	6842		12.959	0	1	995160	+		16933	23421	11475	11484	19614	19614					0.022622957953217337
IIVEPKRRKR	10	Unmodified	_IIVEPKRRKR_					0	0	0			REV__ENST00000305105.2_1_7:100865971-100866960:+|nuORF	REV__ENST00000305105.2_1_7:100865971-100866960:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.2552795410156	3	432.285851	1293.83572	4.7995	0.0020747	2.1968	0.00094963	6.9962	0.0030244	432.28734539602226	107.08	0.18188	107.23	107.1	107.29	0.14929					6	4	2	0	0	0	0.37624	1	13105	13105		11.097	0	1	38180	+		16934	24812	11476	11485	19615	19615					0.2005581987896221
IIVFFSCV	8	Unmodified	_IIVFFSCV_					0	0	0		ENSG00000156222|ENST00000394573|SLC28A1	ENSG00000156222|ENST00000394573|SLC28A1	ENSG00000156222|ENST00000394573|SLC28A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.251708984375	2	464.254057	926.493561	-1.597	-0.00074142	1.5248	0.00070789	-0.072229	-3.3533E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.86791	1	8407	8407		28.254	0	1	1324500			16935	5369	11477	11486	19616	19616					0.027374161448278755
IIVGLISES	9	Unmodified	_IIVGLISES_					0	0	0			REV__nc|ENSG00000204403|Q6UXS9-8|CASP12	REV__nc|ENSG00000204403|Q6UXS9-8|CASP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.77752685546875	2	465.778951	929.543348	-0.22002	-0.00010248	-2.5656	-0.001195	-2.7857	-0.0012975	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.7932	1	9618	9618		24.203	0	1	1042300	+		16936	30161	11478	11487	19617	19617					0.07575822354465345
IIVGLLELLI	10	Unmodified	_IIVGLLELLI_					0	0	0			REV__ENSG00000277161|ENST00000614443|PIGW	REV__ENSG00000277161|ENST00000614443|PIGW	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.3742065429688	2	548.373018	1094.73148	0.10207	5.5971E-05	2.4087	0.0013209	2.5108	0.0013769	548.3742221063811	37.296	1.0877	37.32	36.95	38.037	0.023621					64	31	3	0	0	0	0.8488	1	2158	2158		17.365	5.8539	1	318790	+		16937	24022	11479	11488	19618	19618					0.18790680278880245
IIVHFGIRP	9	Unmodified	_IIVHFGIRP_					0	0	0		nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA;ENSG00000113360|ENST00000344624|DROSHA;ENST00000512124.6_1_5:31467712-31485015:-|nuORF;ENST00000511803.1_1_5:31468044-31472325:-|nuORF	nc|ENSG00000113360|Q9NRR4-3|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	527.3087158203125	2	526.324194	1050.63383	0.64652	0.00034028	0.32746	0.00017235	0.97398	0.00051263	526.3242858277754	80.861	1.4391	81.004	80.191	81.63	0.14352					66	40	2	0	0	0	0.20789	1	7772	7772		28.254	8.8943	1	60247			16938	2716	11480	11489	19619	19619					0.11054336193410563
IIVHFTHK	8	Unmodified	_IIVHFTHK_					0	0	0			REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.79510498046875	2	497.795269	993.575986	-0.23858	-0.00011877	1.4256	0.00070966	1.187	0.00059089	497.79577554464987	49.055	0.99467	48.961	48.599	49.594	-0.093178					54	23	3	0	0	0	0.84341	1	3807	3807		24.203	2.5004	1	401360	+		16939	26141	11481	11490	19620	19620					0.07894074267983342
IIVHKFHTK	9	Unmodified	_IIVHKFHTK_					0	0	0			REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	REV__ENST00000427606.2_1_8:146220430-146220631:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.8453979492188	2	561.842751	1121.67095	1.4106	0.00079252	3.8171	0.0021446	5.2277	0.0029371	561.8447337891968	96.819	2.411	96.866	96.355	98.766	0.047798					140	55	5	0	0	0	0.78983	1	10309	10309		27.882	2.4321	1	1810100	+		16940	26568	11482	11491	19621	19621					0.11498007739169225
IIVIVLVPL	9	Unmodified	_IIVIVLVPL_					0	0	0			REV__ENSG00000170464|ENST00000302060|DNAJC18	REV__ENSG00000170464|ENST00000302060|DNAJC18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.8503112792969	2	489.851722	977.68889	-1.9466	-0.00095355	-0.91381	-0.00044763	-2.8604	-0.0014012	489.851143534177	75.085	0.78783	75.13	74.842	75.63	0.04509					33	21	2	0	0	0	0.7932	1	7287	7287		21.702	0	1	116340	+		16941	21663	11483	11492	19622	19622					0.19915329941306936
IIVIVLVPL	9	Unmodified	_IIVIVLVPL_					0	0	0			REV__ENSG00000170464|ENST00000302060|DNAJC18	REV__ENSG00000170464|ENST00000302060|DNAJC18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.850830078125	2	489.851722	977.68889	-1.1937	-0.00058473	-1.5282	-0.00074858	-2.7219	-0.0013333	489.85086381019767	75.118	0.87303	75.205	74.865	75.739	0.087631					32	21	2	0	0	0	0.7932	1	6941	6941		21.702	0	1	195300	+		16942	21663	11483	11492	19623	19623					0.19915329941306936
IIVKELTG	8	Unmodified	_IIVKELTG_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7747497558594	2	436.776211	871.537869	-1.136	-0.00049617	-1.8731	-0.00081814	-3.0091	-0.0013143	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.85277	2	8862	8851;8862		30.504	0	1	8774400			16943	2646	11484	11493	19624;19625	19625					0.0969614356265538
IIVKELTG	8	Unmodified	_IIVKELTG_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7748107910156	2	436.776211	871.537869	-0.16229	-7.0884E-05	-2.9337	-0.0012814	-3.096	-0.0013523	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.85277	4	9333	9333;9345;9393;9418		30.504	5.0535	1	15341000			16944	2646	11484	11493	19626;19627;19628;19629	19626					0.0969614356265538
IIVKELTG	8	Unmodified	_IIVKELTG_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.7748107910156	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.85277	1	9137	9137		25.45	0	1	13819000			16945	2646	11484	11493	19630	19630					0.0969614356265538
IIVKELTG	8	Unmodified	_IIVKELTG_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.77484130859375	2	436.776211	871.537869	0.64809	0.00028307	-3.7904	-0.0016555	-3.1423	-0.0013725	436.77446931538566	90.701	2.4445	90.855	90.26	92.704	0.15388					187	58	4	0	0	0	0.884	1	9183	9183		33.516	0	1	11761000			16946	2646	11484	11493	19631	19631					0.0969614356265538
IIVKELTG	8	Unmodified	_IIVKELTG_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7749328613281	2	436.776211	871.537869	-1.8179	-0.00079401	-1.324	-0.00057831	-3.1419	-0.0013723	436.77554812926275	90.686	2.546	90.866	90.262	92.808	0.18029					181	60	4	0	0	0	0.884	1	9051	9051		33.516	0	1	8965000			16947	2646	11484	11493	19632	19632					0.0969614356265538
IIVKELTG	8	Unmodified	_IIVKELTG_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.7748718261719	2	436.776211	871.537869	-0.99178	-0.00043318	-2.1014	-0.00091785	-3.0932	-0.001351	436.7752083239027	90.559	2.3196	91.029	90.562	92.882	0.47068					153	55	5	0	0	0	0.85277	4	10817	10733;10744;10792;10817		38.806	0	1	11924000			16948	2646	11484	11493	19633;19634;19635;19636	19636					0.0969614356265538
IIVKGKKLPSD	11	Unmodified	_IIVKGKKLPSD_					0	0	0		nc|ENSG00000115896|Q15111-2|PLCL1;ENSG00000115896|ENST00000428675|PLCL1	nc|ENSG00000115896|Q15111-2|PLCL1	nc|ENSG00000115896|Q15111-2|PLCL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3801879882812	2	599.381906	1196.74926	0.97491	0.00058434	-4.0729	-0.0024412	-3.098	-0.0018569	599.3792959797308	103.23	2.9032	103.41	102.97	105.87	0.18297					219	73	5	0	0	0	0.70737	1	10933	10933		30.318	2.4355	1	22539000			16949	2880	11485	11494	19637	19637					0.15875395533748815
IIVKGKKLPSD	11	Unmodified	_IIVKGKKLPSD_					0	0	0		nc|ENSG00000115896|Q15111-2|PLCL1;ENSG00000115896|ENST00000428675|PLCL1	nc|ENSG00000115896|Q15111-2|PLCL1	nc|ENSG00000115896|Q15111-2|PLCL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3799438476562	2	599.381906	1196.74926	-1.2913	-0.00077396	-1.7358	-0.0010404	-3.0271	-0.0018144	599.3806932084216	103.36	2.8938	103.47	103.07	105.96	0.11494					245	72	6	0	0	0	0.7342	1	10877	10877		25.574	1.0549	1	20299000			16950	2880	11485	11494	19638	19638					0.15875395533748815
IIVLGNGLI	9	Unmodified	_IIVLGNGLI_					0	0	0			REV__nc|ENSG00000174600|Q99788-2|CMKLR1	REV__nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3013000488281	2	456.299853	910.585153	-0.75416	-0.00034412	3.5877	0.0016371	2.8336	0.001293	456.3012900851617	35.065	1.7041	35.071	34.727	36.431	0.0063934					112	39	4	0	0	0	0.7932	1	2239	2239		20.482	1.1219	1	634200	+		16951	22005	11486	11495	19639	19639					0.1262842283365444
IIVLGNGLI	9	Unmodified	_IIVLGNGLI_					0	0	0			REV__nc|ENSG00000174600|Q99788-2|CMKLR1	REV__nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3012390136719	2	456.299853	910.585153	0.15231	6.9501E-05	2.9243	0.0013344	3.0766	0.0014039	456.30102814495837	33.268	1.6065	33.378	33.034	34.64	0.10991					186	70	4	0	0	0	0.7932	1	1632	1632		25.45	0.94616	1	1696300	+		16952	22005	11486	11495	19640	19640					0.1262842283365444
IIVLLGSN	8	Unmodified	_IIVLLGSN_					0	0	0			REV__ENSG00000141194|ENST00000268912|OR4D1	REV__ENSG00000141194|ENST00000268912|OR4D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.7618408203125	2	414.763104	827.511654	-1.0998	-0.00045617	-2.0044	-0.00083134	-3.1042	-0.0012875	414.762210032181	88.155	2.0302	88.618	88.102	90.132	0.46312					152	49	4	0	0	0	0.88915	1	10397	10397		35.201	6.9464	1	10243000	+		16953	19666	11487	11496	19641	19641					0.09099874391188223
IIVLMPIL	8	Unmodified	_IIVLMPIL_					0	0	0			REV__ENSG00000198899|ENST00000361899|MT-ATP6	REV__ENSG00000198899|ENST00000361899|MT-ATP6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3010559082031	2	456.30355	910.592547	-1.7707	-0.00080797	-3.9526	-0.0018036	-5.7232	-0.0026115	456.3016315256623	46.489	1.398	46.489	46.06	47.458	0					92	40	3	0	0	0	0.88393	1	3506	3506		33.493	4.3434	1	435240	+		16954	23407	11488	11497	19642	19642					0.1336743910972018
IIVLMPIL	8	Unmodified	_IIVLMPIL_					0	0	0			REV__ENSG00000198899|ENST00000361899|MT-ATP6	REV__ENSG00000198899|ENST00000361899|MT-ATP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3013000488281	2	456.30355	910.592547	-1.267	-0.00057813	-3.8109	-0.0017389	-5.0779	-0.0023171	456.3016565043114	33.346	1.5471	33.392	33.095	34.642	0.045853					160	67	4	0	0	0	0.84567	1	1593	1593		24.504	5.144	1	1558600	+		16955	23407	11488	11497	19643	19643					0.1336743910972018
IIVNRALYT	9	Unmodified	_IIVNRALYT_					0	0	0			REV__ENSG00000155897|ENST00000286355|ADCY8	REV__ENSG00000155897|ENST00000286355|ADCY8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.78058	1	9071	9071		30.504	2.6214	1	4208000	+		16956	20453	11489	11498	19644	19644					0.09498308748334239
IIVNSKRN	8	Unmodified	_IIVNSKRN_					0	0	0			REV__ENSG00000070019|ENST00000261170|GUCY2C	REV__ENSG00000070019|ENST00000261170|GUCY2C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2876892089844	2	472.287808	942.561064	-0.97076	-0.00045848	0.82719	0.00039067	-0.14357	-6.7805E-05	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.90465	1	9634	9634		40.573	6.4001	1	26024000	+		16957	16593	11490	11499	19645	19645					0.0874858239999412
IIVPIIYDM	9	Unmodified	_IIVPIIYDM_					0	0	0		ENSG00000180182|ENST00000324817|MED14	ENSG00000180182|ENST00000324817|MED14	ENSG00000180182|ENST00000324817|MED14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.8067626953125	2	538.806654	1075.59875	1.2439	0.00067023	-1.1819	-0.0006368	0.062052	3.3434E-05	538.8059653540298	90.569	3.7366	90.615	89.222	92.959	0.046448					245	88	4	0	0	0	0.78058	1	9477	9477		30.504	4.9296	1	805100			16958	7316	11491	11500	19646	19646					0.06397912550573892
IIVPPLKTQAS	11	Unmodified	_IIVPPLKTQAS_					0	0	0		nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2;ENSG00000064393|ENST00000406875|HIPK2	nc|ENSG00000064393|Q9H2X6-2|HIPK2	nc|ENSG00000064393|Q9H2X6-2|HIPK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	583.858154296875	2	583.860806	1165.70706	-0.33589	-0.00019612	-2.6388	-0.0015407	-2.9747	-0.0017368	583.8590443013582	98.927	2.0052	98.927	98.457	100.46	0					114	48	4	0	0	0	0.72739	1	9959	9959		27.047	0.3544	1	900440			16959	1103	11492	11501	19647	19647					0.13083420125371958
IIVPPLKTQAS	11	Unmodified	_IIVPPLKTQAS_					0	0	0		nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2;ENSG00000064393|ENST00000406875|HIPK2	nc|ENSG00000064393|Q9H2X6-2|HIPK2	nc|ENSG00000064393|Q9H2X6-2|HIPK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	583.8587036132812	2	583.860806	1165.70706	0.86529	0.00050521	-4.0365	-0.0023567	-3.1712	-0.0018515	583.8582639221804	98.476	1.8471	98.633	98.188	100.03	0.15659					108	42	5	0	0	0	0.72106	1	10239	10239		28.081	2.6313	1	894230			16960	1103	11492	11501	19648	19648					0.13083420125371958
IIVPPLKTQAS	11	Unmodified	_IIVPPLKTQAS_					0	0	0		nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2;ENSG00000064393|ENST00000406875|HIPK2	nc|ENSG00000064393|Q9H2X6-2|HIPK2	nc|ENSG00000064393|Q9H2X6-2|HIPK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	583.8583984375	2	583.860806	1165.70706	-1.3418	-0.00078345	-1.8522	-0.0010814	-3.1941	-0.0018649	583.8594781261362	98.555	2.0612	98.751	98.2	100.26	0.19585					97	47	4	0	0	0	0.67778	1	10173	10173		35.152	2.3396	1	828850			16961	1103	11492	11501	19649	19649					0.13083420125371958
IIVRAPRCREL	11	Unmodified	_IIVRAPRCREL_					0	0	0		ENSG00000168003|ENST00000338663|SLC3A2;nc|ENSG00000168003|P08195-3|SLC3A2;nc|ENSG00000168003|P08195|SLC3A2;nc|ENSG00000168003|P08195-5|SLC3A2;nc|ENSG00000168003|P08195-4|SLC3A2	ENSG00000168003|ENST00000338663|SLC3A2	ENSG00000168003|ENST00000338663|SLC3A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.60137939453125	3	442.599329	1324.77616	0.74395	0.00032927	2.9968	0.0013264	3.7408	0.0016557	442.6006119209599	103.61	1.0073	103.74	103.4	104.41	0.12622					56	24	3	0	0	0	0.74022	1	11000	11000		24.232	0.85391	1	341680			16962	6353	11493	11502	19650	19650					0.12676180873290832
IIVRDALM	8	Unmodified	_IIVRDALM_					0	0	0		ENST00000589604.5_1_18:61064221-61077532:-|nuORF;ENST00000591475.5_1_18:61064221-61089576:-|nuORF;ENSG00000119541|ENST00000238497|VPS4B	ENST00000589604.5_1_18:61064221-61077532:-|nuORF	ENST00000589604.5_1_18:61064221-61077532:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7778625488281	2	465.775688	929.536823	-0.25577	-0.00011913	4.2902	0.0019982	4.0344	0.0018791	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.90465	1	7961	7961		40.573	7.057	1	451640			16963	3074	11494	11503	19651	19651					0.06923605922099796
IIVRDALM	8	Unmodified	_IIVRDALM_					0	0	0		ENST00000589604.5_1_18:61064221-61077532:-|nuORF;ENST00000591475.5_1_18:61064221-61089576:-|nuORF;ENSG00000119541|ENST00000238497|VPS4B	ENST00000589604.5_1_18:61064221-61077532:-|nuORF	ENST00000589604.5_1_18:61064221-61077532:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.77777099609375	2	465.775688	929.536823	-0.22002	-0.00010248	4.439	0.0020676	4.2189	0.0019651	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.88915	2	9499	9499;9554		40.573	8.6178	1	1042300			16964	3074	11494	11503	19652;19653	19652					0.06923605922099796
IIVSHIHVIRV	11	Unmodified	_IIVSHIHVIRV_					0	0	0			REV__nc|ENSG00000185515|P46736-5|BRCC3	REV__nc|ENSG00000185515|P46736-5|BRCC3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4052734375	2	643.408789	1284.80303	0.024155	1.5542E-05	-4.3274	-0.0027843	-4.3033	-0.0027688	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.6921	1	11067	11067		32.812	3.6424	1	11188000	+		16965	22771	11495	11504	19654	19654					0.1720161275609371
IIVSHIHVIRV	11	Unmodified	_IIVSHIHVIRV_					0	0	0			REV__nc|ENSG00000185515|P46736-5|BRCC3	REV__nc|ENSG00000185515|P46736-5|BRCC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4055786132812	2	643.408789	1284.80303	1.777	0.0011433	-4.4559	-0.002867	-2.6789	-0.0017236	643.4059831518348	106.95	1.1451	106.98	106.72	107.86	0.03688					79	26	4	0	0	0	0.6921	2	11769	11769;11780		32.812	4.7309	1	1597700	+		16966	22771	11495	11504	19655;19656	19655					0.1720161275609371
IIVSHIHVIRV	11	Unmodified	_IIVSHIHVIRV_					0	0	0			REV__nc|ENSG00000185515|P46736-5|BRCC3	REV__nc|ENSG00000185515|P46736-5|BRCC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4059448242188	2	643.408789	1284.80303	-1.1464	-0.0007376	-2.6841	-0.001727	-3.8305	-0.0024646	643.4069214023369	106.26	1.0134	106.32	106.14	107.15	0.053749					110	23	5	0	0	0	0.63176	2	11379	11367;11379		40.778	9.2484	1	13678000	+		16967	22771	11495	11504	19657;19658	19658					0.1720161275609371
IIVSVKLHKGM	11	Unmodified	_IIVSVKLHKGM_					0	0	0			REV__ENST00000569569.5_1_16:56970711-56970768:+|nuORF	REV__ENST00000569569.5_1_16:56970711-56970768:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9220275878906	3	408.921409	1223.7424	-1.9234	-0.00078652	3.9771	0.0016263	2.0537	0.00083978	408.9230151046432	104.46	2.832	104.56	103.59	106.42	0.093857					212	70	5	0	0	0	0.73893	1	11081	11081		21.78	0.74819	1	2027500	+		16968	28915	11496	11505	19659	19659					0.13947759381494507
IIVTAIPVS	9	Unmodified	_IIVTAIPVS_					0	0	0			REV__nc|ENSG00000138030|P50053-2|KHK	REV__nc|ENSG00000138030|P50053-2|KHK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7926330566406	2	456.791861	911.569169	0.19556	8.933E-05	2.7159	0.0012406	2.9114	0.0013299	456.79296638202106	38.11	0.49987	38.204	37.924	38.424	0.094318					45	16	3	0	0	0	0.78058	1	2223	2223		30.504	5.0535	1	1181300	+		16969	29881	11497	11506	19660	19660					0.10984716596749422
IIVTAIPVS	9	Unmodified	_IIVTAIPVS_					0	0	0			REV__nc|ENSG00000138030|P50053-2|KHK	REV__nc|ENSG00000138030|P50053-2|KHK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79205322265625	2	456.791861	911.569169	-2.8446	-0.0012994	3.6569	0.0016705	0.81235	0.00037108	456.79337927026637	41.437	2.022	41.851	41.294	43.316	0.4139					109	52	4	0	0	0	0.78058	1	3639	3639		30.504	1.3541	1	8003100	+		16970	29881	11497	11506	19661	19661					0.10984716596749422
IIVTAIPVS	9	Unmodified	_IIVTAIPVS_					0	0	0			REV__nc|ENSG00000138030|P50053-2|KHK	REV__nc|ENSG00000138030|P50053-2|KHK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79248046875	2	456.791861	911.569169	0.14837	6.7774E-05	2.6615	0.0012157	2.8099	0.0012835	456.79297860960025	37.636	1.5872	38.122	37.704	39.291	0.48581					149	39	5	0	0	0	0.7932	1	3155	3155		23.042	2.5607	1	8942200	+		16971	29881	11497	11506	19662	19662					0.10984716596749422
IIVTPLVAT	9	Unmodified	_IIVTPLVAT_					0	0	0			REV__nc|ENSG00000114013|P42081-2|CD86	REV__nc|ENSG00000114013|P42081-2|CD86	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8021545410156	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3318	3318		17.365	1.7232	1	942760	+		16972	18024	11498	11507	19663	19663					0.11905003113804469
IIVVPKWRNS	10	Unmodified	_IIVVPKWRNS_					0	0	0		chrX:13040342-13040758|14|15.29|0.01|10.88|-|0|None,FAM9C|1	chrX:13040342-13040758|14|15.29|0.01|10.88|-|0|None,FAM9C|1	chrX:13040342-13040758|14|15.29|0.01|10.88|-|0|None,FAM9C|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	606.3704833984375	2	606.36659	1210.71863	0.84903	0.00051483	3.9676	0.0024058	4.8166	0.0029206	606.3688643769136	94.076	3.4223	94.237	93.324	96.746	0.16118					202	81	3	0	0	0	0.8651	1	9628	9628		25.574	1.3713	1	934800			16973	540	11499	11508	19664	19664					0.12169661939378784
IIVVQCGRKLL	11	Unmodified	_IIVVQCGRKLL_					0	0	0			REV__nc|ENSG00000171174|Q9H477-2|RBKS	REV__nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3934936523438	2	621.391751	1240.76895	-0.078752	-4.8936E-05	1.6662	0.0010353	1.5874	0.00098641	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.68378	1	11045	11045		34.173	1.3601	1	10411000	+		16974	21718	11500	11509	19665	19665					0.1581944827287316
IIVVQCGRKLL	11	Unmodified	_IIVVQCGRKLL_					0	0	0			REV__nc|ENSG00000171174|Q9H477-2|RBKS	REV__nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3934936523438	2	621.391751	1240.76895	0.69841	0.00043398	0.89961	0.00055901	1.598	0.00099299	621.3922056168815	104.57	2.6797	104.61	104.09	106.77	0.039856					250	63	5	0	0	0	0.72918	1	11330	11330		26.693	1.1189	1	13976000	+		16975	21718	11500	11509	19666	19666					0.1581944827287316
IIVVQCGRKLL	11	Unmodified	_IIVVQCGRKLL_					0	0	0			REV__nc|ENSG00000171174|Q9H477-2|RBKS	REV__nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3936157226562	2	621.391751	1240.76895	1.3	0.00080781	0.25772	0.00016015	1.5577	0.00096796	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.75495	1	11188	11188		20.947	0	1	23079000	+		16976	21718	11500	11509	19667	19667					0.1581944827287316
IIVVQCGRKLL	11	Unmodified	_IIVVQCGRKLL_					0	0	0			REV__nc|ENSG00000171174|Q9H477-2|RBKS	REV__nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3926391601562	2	621.391751	1240.76895	0.9213	0.00057249	0.4683	0.000291	1.3896	0.00086349	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.72918	1	11034	11034		26.693	2.1737	1	22352000	+		16977	21718	11500	11509	19668	19668					0.1581944827287316
IIVVQCGRKLL	11	Unmodified	_IIVVQCGRKLL_					0	0	0			REV__nc|ENSG00000171174|Q9H477-2|RBKS	REV__nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.3929443359375	2	621.391751	1240.76895	4.2383	0.0026337	-2.3736	-0.0014749	1.8648	0.0011587	621.3901654110842	104.31	1.8962	104.53	104.05	105.95	0.2268					124	45	4	0	0	0	0.68378	1	12710	12710		34.173	2.6427	1	1273000	+		16978	21718	11500	11509	19669	19669					0.1581944827287316
IIWFTYYVF	9	Unmodified	_IIWFTYYVF_					0	0	0			REV__ENST00000366187.2_1_2:39681444-39681540:+|nuORF	REV__ENST00000366187.2_1_2:39681444-39681540:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3799438476562	2	626.326068	1250.63758	1.3735	0.00086029	2.7381	0.0017149	4.1116	0.0025752	626.8268636036064	105.49	0.83444	105.65	105.17	106	0.15924					34	21	3	0	0	0	0.20789	1	11304	11304		42.474	14.592	1	188060	+		16979	25521	11501	11510	19670	19670					0.022289611765927475
IIWLLSIFLLD	11	Unmodified	_IIWLLSIFLLD_					0	0	0			REV__ENSG00000131748|ENST00000336308|STARD3	REV__ENSG00000131748|ENST00000336308|STARD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2608642578125	3	449.275847	1344.80571	-0.33407	-0.00015009	0.65901	0.00029608	0.32493	0.00014598	449.610608065132	66.557	0.11079	66.943	66.851	66.962	0.38582					4	2	2	0	0	0	0.17911	1	7251	7251		13.508	2.4112	1	104970	+		16980	18962	11502	11511	19671	19671					0.1471002337043501
IIYFILYG	8	Unmodified	_IIYFILYG_					0	0	0			REV__ENSG00000127995|ENST00000297273|CASD1	REV__ENSG00000127995|ENST00000297273|CASD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2904968261719	2	501.288954	1000.56336	-0.50311	-0.0002522	3.4354	0.0017221	2.9323	0.0014699	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.88393	1	8719	8719		33.493	2.9893	1	10459000	+		16981	18757	11503	11512	19672	19672					0.06309618085094826
IIYFILYG	8	Unmodified	_IIYFILYG_					0	0	0			REV__ENSG00000127995|ENST00000297273|CASD1	REV__ENSG00000127995|ENST00000297273|CASD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2902526855469	2	501.288954	1000.56336	0.65623	0.00032896	2.1204	0.0010629	2.7767	0.0013919	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.84567	1	8141	8141		24.504	0.30126	1	2931000	+		16982	18757	11503	11512	19673	19673					0.06309618085094826
IIYFILYG	8	Unmodified	_IIYFILYG_					0	0	0			REV__ENSG00000127995|ENST00000297273|CASD1	REV__ENSG00000127995|ENST00000297273|CASD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2906799316406	2	501.288954	1000.56336	0.16565	8.304E-05	3.1154	0.0015617	3.2811	0.0016448	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.88393	1	9775	9775		33.493	5.6107	1	2717900	+		16983	18757	11503	11512	19674	19674					0.06309618085094826
IIYFILYG	8	Unmodified	_IIYFILYG_					0	0	0			REV__ENSG00000127995|ENST00000297273|CASD1	REV__ENSG00000127995|ENST00000297273|CASD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29052734375	2	501.288954	1000.56336	-0.45424	-0.0002277	3.3261	0.0016674	2.8719	0.0014397	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.88393	1	10072	10072		33.493	4.3229	1	9727400	+		16984	18757	11503	11512	19675	19675					0.06309618085094826
IIYKGGTSR	9	Unmodified	_IIYKGGTSR_					0	0	0		ENSG00000148180|ENST00000432226|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396|GSN;ENST00000373807.5_1_9:124074589-124093809:+|nuORF	ENSG00000148180|ENST00000432226|GSN	ENSG00000148180|ENST00000432226|GSN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.78729248046875	2	497.787641	993.56073	0.10344	5.1491E-05	-0.24665	-0.00012278	-0.14321	-7.1287E-05	497.7873670915065	23.255	0.78478	22.836	22.544	23.328	-0.41879					47	18	4	0	0	0	0.17181	1	1020	1020		79.713	0.26157	1	463980			16985	4936	11504	11513	19676	19676					0.06369162680141471
IIYLIILTTT	10	Unmodified	_IIYLIILTTT_					0	0	0			REV__nc|ENSG00000172005|P21145-2|MAL	REV__nc|ENSG00000172005|P21145-2|MAL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.353515625	2	582.367933	1162.72131	-0.84099	-0.00048976	4.2388	0.0024685	3.3978	0.0019788	582.3701660352873	103.57	0.23544	103.57	103.43	103.67	-0.0035706					13	5	4	0	0	0	0.37624	1	11121	11121		23.042	1.0826	1	909360	+		16986	21794	11505	11514	19677	19677					0.14646072553637168
IIYLIILTTT	10	Unmodified	_IIYLIILTTT_					0	0	0			REV__nc|ENSG00000172005|P21145-2|MAL	REV__nc|ENSG00000172005|P21145-2|MAL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3535766601562	2	582.367933	1162.72131	0.72017	0.0004194	0.521	0.00030341	1.2412	0.00072282	582.3681106538511	103.66	0.49805	103.84	103.78	104.28	0.18298					13	11	2	0	0	0	0.37624	1	11016	11016		30.504	13.139	1	292770	+		16987	21794	11505	11514	19678	19678					0.14646072553637168
IIYLIILTTT	10	Unmodified	_IIYLIILTTT_					0	0	0			REV__nc|ENSG00000172005|P21145-2|MAL	REV__nc|ENSG00000172005|P21145-2|MAL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3533935546875	2	582.367933	1162.72131	-1.3469	-0.00078436	3.1019	0.0018065	1.7551	0.0010221	582.3698537817837	103.33	0.26701	103.44	103.27	103.54	0.11494					8	6	2	0	0	0	0.37624	1	10859	10859		30.504	8.5438	1	708240	+		16988	21794	11505	11514	19679	19679					0.14646072553637168
IIYLTATG	8	Unmodified	_IIYLTATG_					0	0	0		ENSG00000181433|ENST00000370709|SAGE1	ENSG00000181433|ENST00000370709|SAGE1	ENSG00000181433|ENST00000370709|SAGE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	426.2458190917969	2	426.247286	850.48002	-1.1835	-0.00050446	-1.6997	-0.0007245	-2.8832	-0.001229	426.24646575286147	87.846	4.0837	87.846	85.783	89.866	0					184	94	2	0	0	0	0.88915	2	8418	8418;8442		54.765	7.9982	1	2605100			16989	7390	11506	11515	19680;19681	19680					0.04879881637248218
IIYWIGTN	8	Unmodified	_IIYWIGTN_					0	0	0		ENSG00000092148|ENST00000399332|HECTD1	ENSG00000092148|ENST00000399332|HECTD1	ENSG00000092148|ENST00000399332|HECTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.26806640625	2	490.26601	978.517468	0.64647	0.00031694	4.0877	0.002004	4.7341	0.002321	490.26800757881944	83.964	3.3049	84.112	83.013	86.318	0.14793					138	76	2	0	0	0	0.91005	1	8298	8298		42.474	5.3154	1	246750			16990	1693	11507	11516	19682	19682					0.02734972902874233
IKADKVLDM	9	Unmodified	_IKADKVLDM_					0	0	0			REV__nc|ENSG00000196526|Q8N556|AFAP1	REV__nc|ENSG00000196526|Q8N556|AFAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7935180664062	2	516.791535	1031.56852	0.82179	0.0004247	2.9641	0.0015318	3.7859	0.0019565	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.69624	1	9093	9093		40.778	6.6056	1	858640	+		16991	23139	11508	11517	19683	19683					0.053995538853769176
IKAGWKGSQLE	11	Unmodified	_IKAGWKGSQLE_					0	0	0			REV__ENSG00000124491|ENST00000264870|F13A1	REV__ENSG00000124491|ENST00000264870|F13A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	608.8366088867188	2	608.837862	1215.66117	-1.2606	-0.00076749	0.27958	0.00017022	-0.981	-0.00059727	608.8379314653004	110.3	0.94635	110.3	110.1	111.04	-0.0074387					59	30	4	0	0	0	0.7434	1	11766	11766		23.523	2.5758	1	2774900	+		16992	18589	11509	11518	19684	19684					0.061967749431460106
IKAINLNRPI	10	Unmodified	_IKAINLNRPI_					0	0	0		ENST00000522080.5_1_3:169513982-169530312:-|nuORF;ENSG00000171757|ENST00000446859|LRRC34	ENST00000522080.5_1_3:169513982-169530312:-|nuORF	ENST00000522080.5_1_3:169513982-169530312:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3692016601562	2	576.36659	1150.71863	0.38706	0.00022309	4.0536	0.0023364	4.4407	0.0025595	576.3687857053872	46.409	2.2039	46.447	45.362	47.565	0.038181					117	60	3	0	0	0	0.77314	1	3432	3432		40.778	12.896	1	342020			16993	6704	11510	11519	19685	19685					0.14929661939368088
IKALRNAN	8	Unmodified	_IKALRNAN_					0	0	0		nc|ENSG00000170962|Q9GZP0-2|PDGFD;ENSG00000170962|ENST00000393158|PDGFD	nc|ENSG00000170962|Q9GZP0-2|PDGFD	nc|ENSG00000170962|Q9GZP0-2|PDGFD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.27349853515625	2	450.274701	898.534849	-1.7762	-0.00079979	1.8456	0.00083102	0.069358	3.123E-05	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.884	1	12263	12263		33.516	3.0119	1	2494900			16994	6629	11511	11520	19686	19686					0.08152313228504227
IKANKKGTN	9	Unmodified	_IKANKKGTN_					0	0	0			REV__ENSG00000213585|ENST00000265333|VDAC1	REV__ENSG00000213585|ENST00000265333|VDAC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.29296875	2	487.293091	972.571629	0.70329	0.00034271	-0.54514	-0.00026564	0.15815	7.7066E-05	487.2927254358079	90.914	2.8458	91.068	90.679	93.525	0.15388					125	68	3	0	0	0	0.76764	1	9131	9131		34.173	0	1	1558400	+		16995	23621	11512	11521	19687	19687					0.08424565054428967
IKAQFIGP	8	Unmodified	_IKAQFIGP_					0	0	0		ENST00000398028.3_1_6:151148820-151149375:+|nuORF;ENSG00000115539|ENST00000264254|PDCL3;ENST00000429744.2_1_1:52645740-52646091:+|nuORF;ENST00000489621.1_1_3:101431822-101432032:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2657165527344	2	437.263271	872.511988	2.8534	0.0012477	2.2102	0.00096646	5.0637	0.0022142	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.82464	1	1429	1429		21.702	0	1	21873000			16996	2853	11513	11522	19688	19688					0.0706329411104889
IKAYAVILTTG	11	Unmodified	_IKAYAVILTTG_					0	0	0		ENSG00000149177|ENST00000418331|PTPRJ;nc|ENSG00000149177|Q12913-3|PTPRJ	ENSG00000149177|ENST00000418331|PTPRJ	ENSG00000149177|ENST00000418331|PTPRJ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.345458984375	2	575.347532	1148.68051	0.97571	0.00056137	-4.2468	-0.0024434	-3.2711	-0.001882	575.3449806461122	98.555	2.3295	98.603	98.055	100.38	0.048157					165	53	5	0	0	0	0.69995	1	10546	10546		31.53	8.0071	1	4316200			16997	5001	11514	11523	19689	19689					0.1121173123403878
IKCPYTKAEKP	11	Unmodified	_IKCPYTKAEKP_					0	0	0			REV__nc|ENSG00000104055|O43548-2|TGM5	REV__nc|ENSG00000104055|O43548-2|TGM5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3571166992188	2	639.349748	1276.68494	3.0904	0.0019759	3.3759	0.0021584	6.4664	0.0041343	640.3567163045125	99.066	2.3862	99.429	98.727	101.11	0.36292					195	59	5	0	0	0	0.28254	3	11962	11962;11974;12016		75.043	30.666	1	1604000	+		16998	17433	11515	11524	19690;19691;19692	19690					0.057668723852884796
IKCPYTKAEKP	11	Unmodified	_IKCPYTKAEKP_					0	0	0			REV__nc|ENSG00000104055|O43548-2|TGM5	REV__nc|ENSG00000104055|O43548-2|TGM5	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	639.349748	1276.68494	-0.036307	-2.3213E-05	2.0312	0.0012987	1.9949	0.0012755	639.350747632087	99.16	0.99697	99.16	98.89	99.887	0	-0.054385	3.2866E-05	NaN	75.043	33	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	335620	+		16999	17433	11515	11524							0.057668723852884796
IKCPYTKAEKP	11	Unmodified	_IKCPYTKAEKP_					0	0	0			REV__nc|ENSG00000104055|O43548-2|TGM5	REV__nc|ENSG00000104055|O43548-2|TGM5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	639.349748	1276.68494	-0.081489	-5.21E-05	1.1776	0.00075292	1.0962	0.00070082	639.3504860052985	99.227	0.37422	99.277	99.061	99.436	0.04982	0.062528	-0.0010586	NaN	75.043	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60065	+		17000	17433	11515	11524							0.057668723852884796
IKCPYTKAEKP	11	Unmodified	_IKCPYTKAEKP_					0	0	0			REV__nc|ENSG00000104055|O43548-2|TGM5	REV__nc|ENSG00000104055|O43548-2|TGM5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	639.349748	1276.68494	1.5633	0.0009995	0.75679	0.00048385	2.3201	0.0014834	639.8521234268374	98.865	0.37026	99.087	98.877	99.247	0.22263	-0.1271	-0.0015968	NaN	75.043	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61364	+		17001	17433	11515	11524							0.057668723852884796
IKCPYTKAEKP	11	Unmodified	_IKCPYTKAEKP_					0	0	0			REV__nc|ENSG00000104055|O43548-2|TGM5	REV__nc|ENSG00000104055|O43548-2|TGM5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	639.349748	1276.68494	0.92219	0.0005896	0.70031	0.00044774	1.6225	0.0010373	639.349986200437	98.993	0.45515	99.15	98.859	99.314	0.15659	-0.064782	-0.001669	NaN	75.043	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97602	+		17002	17433	11515	11524							0.057668723852884796
IKCPYTKAEKP	11	Unmodified	_IKCPYTKAEKP_					0	0	0			REV__nc|ENSG00000104055|O43548-2|TGM5	REV__nc|ENSG00000104055|O43548-2|TGM5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	639.349748	1276.68494	-1.1619	-0.00074285	2.9627	0.0018942	1.8008	0.0011514	639.3514228862263	98.998	0.41543	99.184	98.943	99.358	0.18582	-0.0306	0.0012239	NaN	75.043	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95661	+		17003	17433	11515	11524							0.057668723852884796
IKCRKNHPDV	10	Unmodified	_IKCRKNHPDV_					0	0	0		ENSG00000170627|ENST00000305879|GTSF1	ENSG00000170627|ENST00000305879|GTSF1	ENSG00000170627|ENST00000305879|GTSF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92919921875	3	403.88888	1208.64481	-0.92417	-0.00037326	4.1963	0.0016948	3.2722	0.0013216	404.2248330638415	46.167	0.24222	47.09	46.949	47.191	0.92315					7	5	2	0	0	0	0.37624	1	4361	4361		6.3209	0	1	257220			17004	6605	11516	11525	19693	19693					0.04883370505376661
IKDKPLISF	9	Unmodified	_IKDKPLISF_					0	0	0			REV__nc|ENSG00000146143|P49643-2|PRIM2	REV__nc|ENSG00000146143|P49643-2|PRIM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8211669921875	2	530.823692	1059.63283	-0.85098	-0.00045172	-4.1464	-0.002201	-4.9974	-0.0026527	530.8213432265311	82.745	2.1308	82.745	82.264	84.395	0					134	52	5	0	0	0	0.74721	1	7777	7777		37.159	6.6555	1	4119600	+		17005	19990	11517	11526	19694	19694					0.10540077033851958
IKDLADVDL	9	Unmodified	_IKDLADVDL_					0	0	0		ENSG00000160007|ENST00000672722|ARHGAP35	ENSG00000160007|ENST00000672722|ARHGAP35	ENSG00000160007|ENST00000672722|ARHGAP35	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.2637023925781	2	501.279315	1000.54408	1.1243	0.00056358	0.41554	0.0002083	1.5398	0.00077189	501.27899690325637	32.865	1.0149	33.077	32.636	33.651	0.21168					36	23	2	0	0	0	0.20789	1	2343	2343		25.574	0	1	136440			17006	5552	11518	11527	19695	19695					0.04382617003534506
IKDLGEKLRHR	11	Unmodified	_IKDLGEKLRHR_					0	0	0		ENSG00000268655|ENST00000637680|unknown	ENSG00000268655|ENST00000637680|unknown	ENSG00000268655|ENST00000637680|unknown	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6075439453125	3	455.608882	1363.80482	-1.0996	-0.00050099	-0.27784	-0.00012659	-1.3774	-0.00062757	455.608769026608	69.403	0.69586	69.468	69.035	69.731	0.065506					64	33	3	0	0	0	0.73277	1	6241	6241		25.892	4.1113	1	225360			17007	8963	11519	11528	19696	19696					0.13746621774066625
IKDSVMVL	8	Unmodified	_IKDSVMVL_					0	0	0		nc|ENSG00000131791|O43741-2|PRKAB2;ENSG00000131791|ENST00000254101|PRKAB2	nc|ENSG00000131791|O43741-2|PRKAB2	nc|ENSG00000131791|O43741-2|PRKAB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.7640686035156	2	452.762246	903.50994	0.20505	9.2837E-05	2.411	0.0010916	2.6161	0.0011845	452.7633107571631	39.557	0.6575	39.646	39.396	40.053	0.088375					30	16	2	0	0	0	0.85277	1	2473	2473		25.45	1.2474	1	150760			17008	3750	11520	11529	19697	19697					0.0543249731092601
IKDTLRLDLL	10	Unmodified	_IKDTLRLDLL_					0	0	0			REV__ENSG00000029639|ENST00000367166|TFB1M	REV__ENSG00000029639|ENST00000367166|TFB1M	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.9182434082031	3	400.583451	1198.72852	0.57912	0.00023199	0.86778	0.00034762	1.4469	0.0005796	400.5838627795449	24.287	0.98159	24.343	23.961	24.942	0.055487					52	24	3	0	0	0	0.76096	1	876	876		41.427	3.6151	1	65016	+		17009	16270	11521	11530	19698	19698					0.13710805154096306
IKEEFVKKP	9	Unmodified	_IKEEFVKKP_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.3345336914062	2	559.334424	1116.6543	0.24055	0.00013455	-0.55698	-0.00031154	-0.31644	-0.00017699	559.3340611599375	63.586	1.1315	64.14	63.598	64.729	0.5545					46	26	2	0	0	0	0.66686	1	6857	6857		42.864	3.6114	1	1971700	+		17010	20437;29946	11522	11531	19699	19699					0.10063462062566941
IKEEKNWLKKR	11	Unmodified	_IKEEKNWLKKR_					0	0	0			REV__nc|ENSG00000164270|Q13639-9|HTR4	REV__nc|ENSG00000164270|Q13639-9|HTR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.29998779296875	3	491.296304	1470.86708	2.8436	0.001397	2.8529	0.0014016	5.6965	0.0027986	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.8398	1	13258	13258		6.6596	0.33873	1	3274400	+		17011	29989	11523	11532	19700	19700					0.1504834812237732
IKEFKIPINPP	11	Unmodified	_IKEFKIPINPP_					0	0	0			REV__ENSG00000182447|ENST00000327928|OTOL1	REV__ENSG00000182447|ENST00000327928|OTOL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3925170898438	2	648.389731	1294.76491	2.6473	0.0017165	1.9919	0.0012915	4.6393	0.0030081	648.3908884221966	106.46	0.85558	106.43	105.94	106.79	-0.034134					69	19	4	0	0	0	0.70278	1	11768	11768		21.686	0	1	16306000	+		17012	22523	11524	11533	19701	19701					0.12931682050816562
IKEFKSKLN	9	Unmodified	_IKEFKSKLN_					0	0	0			REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8298950195312	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.75725	1	9012	9012		36.447	4.9169	1	1489800	+		17013	20827	11525	11534	19702	19702					0.10094577919812764
IKEFKSKLN	9	Unmodified	_IKEFKSKLN_					0	0	0			REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8300170898438	2	553.832049	1105.64954	-1.2274	-0.00067979	-2.3284	-0.0012895	-3.5558	-0.0019693	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.71772	1	10454	10454		39.253	1.4413	1	1825600	+		17014	20827	11525	11534	19703	19703					0.10094577919812764
IKEFKSKLN	9	Unmodified	_IKEFKSKLN_					0	0	0			REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8303833007812	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.73802	1	10816	10816		37.812	2.1932	1	5911200	+		17015	20827	11525	11534	19704	19704					0.10094577919812764
IKEFVVNL	8	Unmodified	_IKEFVVNL_					0	0	0			REV__ENSG00000136040|ENST00000258526|PLXNC1	REV__ENSG00000136040|ENST00000258526|PLXNC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.8006591796875	2	481.289485	960.564418	2.0459	0.00098469	-2.1307	-0.0010255	-0.084739	-4.0784E-05	481.2884772068096	95.465	0.24639	95.408	95.347	95.593	-0.057526					8	5	2	0	0	0	0.4196	1	10198	10198		14.137	2.6261	1	42146	+		17016	19282	11526	11535	19705	19705					0.08255832453994572
IKEGAYGLVAL	11	Unmodified	_IKEGAYGLVAL_					0	0	0			REV__ENST00000476117.1_1_7:104808473-104809645:-|nuORF	REV__ENST00000476117.1_1_7:104808473-104809645:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3299560546875	2	567.331882	1132.64921	0.77491	0.00043963	-4.0071	-0.0022734	-3.2322	-0.0018337	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.7144	1	9067	9067		29.17	0	1	6344600	+		17017	27326	11527	11536	19706	19706					0.0881915819995811
IKEGAYGLVAL	11	Unmodified	_IKEGAYGLVAL_					0	0	0			REV__ENST00000476117.1_1_7:104808473-104809645:-|nuORF	REV__ENST00000476117.1_1_7:104808473-104809645:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3301391601562	2	567.331882	1132.64921	1.2029	0.00068247	-3.4414	-0.0019524	-2.2385	-0.00127	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.72106	1	10539	10539		28.081	0.19925	1	4990000	+		17018	27326	11527	11536	19707	19707					0.0881915819995811
IKEGYYKRIL	10	Unmodified	_IKEGYYKRIL_					0	0	0			REV__ENST00000426898.2_1_12:45610123-45776982:+|nuORF	REV__ENST00000426898.2_1_12:45610123-45776982:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8824462890625	2	641.87953	1281.74451	2.6248	0.0016848	1.9473	0.0012499	4.5721	0.0029347	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.86348	1	11809	11809		31.53	2.3598	1	4455800	+		17019	22181	11528	11537	19708	19708					0.11490511390979918
IKEILRFWL	9	Unmodified	_IKEILRFWL_					0	0	0		nc|ENSG00000138079|Q07837-2|SLC3A1;nc|ENSG00000138079|Q07837-5|SLC3A1;nc|ENSG00000138079|Q07837-7|SLC3A1;nc|ENSG00000138079|Q07837-6|SLC3A1;ENSG00000138079|ENST00000260649|SLC3A1;nc|ENSG00000138079|Q07837-3|SLC3A1	nc|ENSG00000138079|Q07837-2|SLC3A1	nc|ENSG00000138079|Q07837-2|SLC3A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.58795166015625	3	406.585015	1216.73321	2.8188	0.0011461	3.6865	0.0014989	6.5053	0.0026449	406.58643454203246	24.703	1.6586	24.666	24.201	25.86	-0.037178					110	42	4	0	0	0	0.78912	1	960	960		28.081	1.0342	1	337090			17020	4266	11529	11538	19709	19709					0.13351734087518707
IKEKPHTLL	9	Unmodified	_IKEKPHTLL_					0	0	0			REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.8324584960938	2	539.834591	1077.65463	-0.19544	-0.00010551	-3.7687	-0.0020345	-3.9641	-0.00214	539.832406828333	95.236	2.2447	95.304	94.755	97	0.068344					122	52	4	0	0	0	0.51307	1	9947	9947		51.335	7.2187	1	1265100	+		17021	22851	11530	11539	19710	19710					0.11890881782437646
IKEKPHTLL	9	Unmodified	_IKEKPHTLL_					0	0	0			REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	539.834591	1077.65463	0.91208	0.00049237	-4.8189	-0.0026014	-3.9068	-0.002109	539.8318566448087	94.673	1.4846	95.105	94.801	96.286	0.4324	-0.069363	-0.00054812	NaN	51.335	75	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	642700	+		17022	22851	11530	11539							0.11890881782437646
IKEKPHTLL	9	Unmodified	_IKEKPHTLL_					0	0	0			REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	539.834591	1077.65463	-0.15748	-8.5012E-05	-3.8253	-0.002065	-3.9828	-0.00215	539.8324195454245	94.884	1.4204	95.304	94.89	96.31	0.41963	0.12963	0.00052465	NaN	51.335	70	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	840600	+		17023	22851	11530	11539							0.11890881782437646
IKEKQWYWWFW	11	Unmodified	_IKEKQWYWWFW_					0	0	0			REV__nc|ENSG00000001036|Q9BTY2-2|FUCA2	REV__nc|ENSG00000001036|Q9BTY2-2|FUCA2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.7748107910156	4	425.715956	1698.83472	0.073235	3.1177E-05	-3.5776	-0.001523	-3.5044	-0.0014919	425.9643681729198	39.359	0.24902	39.328	39.114	39.363	-0.03027					6	5	2	0	0	0	0.18372	1	2707	2707		3.4087	3.0373	1	19043	+		17024	16038	11531	11540	19711	19711					0.013255607193968899
IKELWPSA	8	Unmodified	_IKELWPSA_					0	0	0		ENST00000562717.1_1_16:50188117-50258568:+|nuORF;nc|ENSG00000121274|Q8NDF8-4|TENT4B;nc|ENSG00000121274|Q8NDF8-2|TENT4B;nc|ENSG00000121274|Q8NDF8|TENT4B;nc|ENSG00000121274|Q8NDF8-3|TENT4B;nc|ENSG00000121274|Q8NDF8-5|TENT4B;ENSG00000121274|ENST00000561678|TENT4B	ENST00000562717.1_1_16:50188117-50258568:+|nuORF	ENST00000562717.1_1_16:50188117-50258568:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.28759765625	2	472.26601	942.517468	-0.97263	-0.00045934	-3.3079	-0.0015622	-4.2806	-0.0020216	472.2643751466927	95.679	0.77633	95.679	95.226	96.002	0					26	17	2	0	0	0	0.4196	1	9553	9553		29.15	0	1	171590			17025	3172	11532	11541	19712	19712					0.043909729028428046
IKEPKKLMPK	10	Unmodified	_IKEPKKLMPK_					0	0	0		nc|ENSG00000214193|A4FU49|SH3D21;nc|ENSG00000214193|A4FU49-3|SH3D21;ENSG00000214193|ENST00000453908|SH3D21;nc|ENSG00000214193|A4FU49-4|SH3D21;nc|ENSG00000214193|A4FU49-5|SH3D21	nc|ENSG00000214193|A4FU49|SH3D21	nc|ENSG00000214193|A4FU49|SH3D21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.92218017578125	3	404.58966	1210.74715	-1.9009	-0.00076907	-0.20102	-8.1332E-05	-2.1019	-0.0008504	404.9239578033223	40.904	1.2809	40.908	40.545	41.826	0.0043983					58	43	2	0	0	0	0.86409	1	2625	2625		25.126	0.89417	1	259010			17026	8620	11533	11542	19713	19713					0.15020643524303523
IKEPLSIPSCI	11	Unmodified	_IKEPLSIPSCI_					0	0	0			REV__ENSG00000204923|ENST00000377957|FBXO48	REV__ENSG00000204923|ENST00000377957|FBXO48	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	600.3360595703125	2	600.338849	1198.66315	0.8556	0.00051365	3.1262	0.0018768	3.9818	0.0023904	600.8416709328918	28.959	0.21139	29.027	28.928	29.139	0.068678					14	10	2	0	0	0	0.72106	1	1206	1206		28.081	3.5623	1	67428	+		17027	23528	11534	11543	19714	19714					0.07176067636760308
IKERLQSCYQ	10	Unmodified	_IKERLQSCYQ_					0	0	0		ENSG00000076356|ENST00000367033|PLXNA2;ENST00000460870.1_1_1:208383501-208390355:-|nuORF;nc|ENSG00000076356|O75051-2|PLXNA2	ENSG00000076356|ENST00000367033|PLXNA2	ENSG00000076356|ENST00000367033|PLXNA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3261108398438	2	634.326805	1266.63906	-0.16269	-0.0001032	-2.4521	-0.0015555	-2.6148	-0.0016587	634.3251860671769	59.374	1.1226	59.374	59.025	60.147	0.00051117					97	36	4	0	0	0	0.54701	1	5137	5137		52.937	1.744	1	1865700			17028	1356	11535	11544	19715	19715					0.01640227203051836
IKEVPLSLPNR	11	Unmodified	_IKEVPLSLPNR_					0	0	0			REV__nc|ENSG00000115904|Q07889-2|SOS1	REV__nc|ENSG00000115904|Q07889-2|SOS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59283447265625	3	422.590717	1264.75032	0.34868	0.00014735	4.1113	0.0017374	4.4599	0.0018847	422.5923689571847	58.01	1.1959	58.12	57.495	58.691	0.11027					112	57	3	0	0	0	0.71803	1	4955	4955		28.577	5.1988	1	286690	+		17029	18161	11536	11545	19716	19716					0.12853609902640528
IKEVSAQWDQ	10	Unmodified	_IKEVSAQWDQ_					0	0	0		nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;ENSG00000070182|ENST00000644917|SPTB	nc|ENSG00000070182|P11277-3|SPTB	nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	602.3033447265625	2	602.303852	1202.59315	-1.1515	-0.00069353	1.2544	0.00075552	0.10292	6.199E-05	602.3045152261253	74.856	0.92805	74.901	74.592	75.52	0.04509					73	27	4	0	0	0	0.70553	1	7310	7310		44.377	2.9506	1	1231800			17030	1234	11537	11546	19717	19717					-4.0947075376607245E-05
IKEWKTPQR	9	Unmodified	_IKEWKTPQR_					0	0	0			REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|37|1|sense	REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|37|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	593.343994140625	2	593.340572	1184.66659	3.3538	0.0019899	2.9688	0.0017615	6.3226	0.0037515	593.3422294286001	103.53	2.4934	103.48	103.12	105.61	-0.043755					162	59	4	0	0	0	0.7932	1	11393	11393		25.574	5.5773	1	2080000	+		17031	29570	11538	11547	19718	19718					0.08164498525593444
IKEYKEKLL	9	Unmodified	_IKEYKEKLL_					0	0	0		ENSG00000123219|ENST00000396679|CENPK;chr5:65554946-65561497|61|23.43|0.5|5.56|-|ENST00000514814|CENPK,CENPK	ENSG00000123219|ENST00000396679|CENPK	ENSG00000123219|ENST00000396679|CENPK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3539428710938	2	582.355357	1162.69616	-0.84163	-0.00049013	-1.8463	-0.0010752	-2.6879	-0.0015653	582.3542363641262	107.42	0.79652	107.38	106.95	107.75	-0.034409					57	18	4	0	0	0	0.7932	1	11719	11719		26.693	1.1189	1	871310			17032	452	11539	11548	19719	19719					0.12132017751082458
IKFFRIKIVA	10	Unmodified	_IKFFRIKIVA_					0	0	0			REV__ENSG00000101850|ENST00000467482|GPR143	REV__ENSG00000101850|ENST00000467482|GPR143	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7663269042969	3	412.27266	1233.79615	-0.32352	-0.00013338	1.2874	0.00053074	0.96384	0.00039736	412.2732514033336	43.064	1.4219	43.014	42.713	44.135	-0.050308					50	34	2	0	0	0	0.37624	1	3066	3066		1.7563	1.2733	1	124340	+		17033	17306	11540	11549	19720	19720					0.18860299875541386
IKFLKCLYEG	10	Unmodified	_IKFLKCLYEG_					0	0	0		CON__Q6NXH9	CON__Q6NXH9	CON__Q6NXH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.2247009277344	3	405.226499	1212.65767	-1.9262	-0.00078053	3.2247	0.0013067	1.2985	0.0005262	405.22779901784565	27.286	0.62692	27.354	27.093	27.72	0.068678					56	30	3	0	0	0	0.86207	1	1066	1066		24.232	0	1	87420		+	17034	629	11541	11550	19721	19721					0.05984388844944988
IKFQPNVWFT	10	Unmodified	_IKFQPNVWFT_					0	0	0			REV__ENST00000533079.5_1_11:64955425-64973207:+|nuORF	REV__ENST00000533079.5_1_11:64955425-64973207:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3442993164062	2	640.345323	1278.67609	0.023456	1.502E-05	2.3741	0.0015203	2.3976	0.0015353	640.3467925312829	103.68	0.57704	103.68	103.38	103.96	0					38	13	4	0	0	0	0.67571	1	10632	10632		45.972	1.5951	1	848260	+		17035	16204	11542	11551	19722	19722					0.047902668111191815
IKGAHIAC	8	Unmodified	_IKGAHIAC_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7284851074219	2	406.725998	811.437443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.462	1	76.51	76.01	77.01	0.047981								0	0	0	0.30004	1	7474	7474		21.702	1.2205	1		+		17036	22575	11543	11552	19723	19723					0.024182080279956608
IKGDANKH	8	Unmodified	_IKGDANKH_					0	0	0			REV__ENSG00000136628|ENST00000366923|EPRS1	REV__ENSG00000136628|ENST00000366923|EPRS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7865905761719	2	441.743234	881.471915	-1.3149	-0.00058085	-0.72635	-0.00032086	-2.0412	-0.00090171	441.742675863657	40.783	0.17186	41.372	41.28	41.451	0.58915					6	4	2	0	0	0	0.4196	1	3518	3518		24.203	0	1	377310	+		17037	19322	11544	11553	19724	19724					0.0264374744045881
IKGDWIGLYRH	11	Unmodified	_IKGDWIGLYRH_					0	0	0		ENSG00000174839|ENST00000311128|DENND6A	ENSG00000174839|ENST00000311128|DENND6A	ENSG00000174839|ENST00000311128|DENND6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.24908447265625	3	453.250695	1356.73025	0.7922	0.00035907	-3.6914	-0.0016731	-2.8992	-0.0013141	453.24893502220635	24.05	1.229	24.007	23.603	24.832	-0.043221					89	31	4	0	0	0	0.72374	1	885	885		27.644	6.6117	1	177000			17038	6967	11545	11554	19725	19725					0.06615858962686616
IKGEMWQNM	9	Unmodified	_IKGEMWQNM_					0	0	0		nc|ENSG00000179873|P59045-3|NLRP11;ENSG00000179873|ENST00000589093|NLRP11;nc|ENSG00000179873|P59045-2|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.76513671875	2	568.764994	1135.51544	0.77917	0.00044317	-0.20962	-0.00011922	0.56955	0.00032394	568.7647838120163	83.726	1.9818	83.657	83.085	85.067	-0.069313					114	45	4	0	0	0	0.47272	1	8549	8549		53.351	2.1588	1	1633100			17039	7299	11546	11555	19726	19726					-0.046901471689125174
IKGEMWQNM	9	Unmodified	_IKGEMWQNM_					0	0	0		nc|ENSG00000179873|P59045-3|NLRP11;ENSG00000179873|ENST00000589093|NLRP11;nc|ENSG00000179873|P59045-2|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.7650756835938	2	568.764994	1135.51544	0.85198	0.00048457	0.17733	0.00010086	1.0293	0.00058544	568.76493069356	83.965	1.7117	84.42	83.767	85.479	0.45556					113	41	4	0	0	0	0.19818	1	9766	9766		74.255	8.7897	1	2150800			17040	7299	11546	11555	19727	19727					-0.046901471689125174
IKGENIFSIKV	11	Unmodified	_IKGENIFSIKV_					0	0	0			REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|107|2|sense	REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|107|2|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.3677368164062	2	624.371538	1246.72852	0.83692	0.00052255	-1.3808	-0.00086214	-0.54388	-0.00033958	624.8720574511251	102.94	0.5322	102.99	102.71	103.24	0.043198					23	12	2	0	0	0	0.17527	1	11144	11144		56.434	31.915	1	1480600	+		17041	29564	11547	11556	19728	19728					0.1150280515405484
IKGESCSENL	10	Carbamidomethyl (C)	_IKGESC(Carbamidomethyl (C))SENL_	IKGESC(1)SENL		IKGESC(60)SENL		0	1	0		ENSG00000196793|ENST00000374446|ZNF239;chr10:43568021-43574540|48|12.83|0.6|4.41|-|ENST00000426961|ZNF239,ZNF239	ENSG00000196793|ENST00000374446|ZNF239	ENSG00000196793|ENST00000374446|ZNF239	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.7650146484375	2	568.766245	1135.51794	-1.1682	-0.00066444	-0.4147	-0.00023587	-1.5829	-0.00090031	568.7659289361396	83.716	2.0783	83.783	83.125	85.204	0.066727					124	47	4	0	0	0	0.44803	1	8382	8382		60.118	8.7828	1	1738400			17042	72	11548	11557	19729	19729	0				-0.04440020230254049
IKGESCSENL	10	Carbamidomethyl (C)	_IKGESC(Carbamidomethyl (C))SENL_	IKGESC(1)SENL		IKGESC(71)SENL		0	1	0		ENSG00000196793|ENST00000374446|ZNF239;chr10:43568021-43574540|48|12.83|0.6|4.41|-|ENST00000426961|ZNF239,ZNF239	ENSG00000196793|ENST00000374446|ZNF239	ENSG00000196793|ENST00000374446|ZNF239	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.7650756835938	2	568.766245	1135.51794	0.77917	0.00044317	-2.4095	-0.0013704	-1.6303	-0.00092727	568.7647838120163	83.726	1.9818	83.657	83.085	85.067	-0.069313					114	45	4	0	0	0	0.31985	2	8587	8562;8587		70.816	12.034	1	1633100			17043	72	11548	11557	19730;19731	19731	0				-0.04440020230254049
IKGESCSENL	10	Carbamidomethyl (C)	_IKGESC(Carbamidomethyl (C))SENL_	IKGESC(1)SENL		IKGESC(60)SENL		0	1	0		ENSG00000196793|ENST00000374446|ZNF239;chr10:43568021-43574540|48|12.83|0.6|4.41|-|ENST00000426961|ZNF239,ZNF239	ENSG00000196793|ENST00000374446|ZNF239	ENSG00000196793|ENST00000374446|ZNF239	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.76513671875	2	568.766245	1135.51794	1.1287	0.00064197	-2.7298	-0.0015526	-1.6011	-0.00091066	568.7646112481654	83.583	2.2126	83.642	82.984	85.196	0.059258					128	50	4	0	0	0	0.4503	1	8412	8412		59.931	8.5953	1	1696800			17044	72	11548	11557	19732	19732	0				-0.04440020230254049
IKGRTGNK	8	Unmodified	_IKGRTGNK_					0	0	0			REV__ENSG00000196136|ENST00000393078|SERPINA3	REV__ENSG00000196136|ENST00000393078|SERPINA3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26531982421875	2	437.266876	872.519199	-2.1128	-0.00092385	-0.58974	-0.00025787	-2.7025	-0.0011817	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.79929	1	850	850		18.324	2.6882	1	1366900	+		17045	23094	11549	11558	19733	19733					0.07784026711476599
IKGSTLLL	8	Unmodified	_IKGSTLLL_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.7790222167969	2	422.778754	843.542954	-0.40521	-0.00017131	0.99541	0.00042084	0.5902	0.00024952	422.778939979372	16.284	0.31081	16.204	16.123	16.434	-0.080017					16	11	2	0	0	0	0.80706	1	99	99		19.36	1.0356	1	59393	+		17046	23043	11550	11559	19734	19734					0.1149244742529163
IKHKILSNESV	11	Unmodified	_IKHKILSNESV_					0	0	0			REV__nc|ENSG00000114573|P38606-2|ATP6V1A	REV__nc|ENSG00000114573|P38606-2|ATP6V1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3720703125	2	634.372069	1266.72959	6.6614	0.0042258	1.1149	0.00070728	7.7763	0.0049331	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.76322	1	13497	13497		19.104	0.84144	1	7041100	+		17047	18056	11551	11560	19735	19735					0.10689019522988019
IKHKKLGPR	9	Unmodified	_IKHKKLGPR_					0	0	0		ENSG00000197943|ENST00000564138|PLCG2;ENST00000567980.5_1_16:81819579-81955027:+|nuORF	ENSG00000197943|ENST00000564138|PLCG2	ENSG00000197943|ENST00000564138|PLCG2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.326904296875	2	538.856193	1075.69783	0.83974	0.0004525	-3.4249	-0.0018455	-2.5852	-0.0013931	538.8544839430691	100.73	0.16017	100.87	100.73	100.89	0.14352					6	3	2	0	0	0	0.20789	1	10536	10536		10.866	3.1753	1	136900			17048	8216	11552	11561	19736	19736					0.16301116350359734
IKHLNILKLQ	10	Unmodified	_IKHLNILKLQ_					0	0	0		ENSG00000166415|ENST00000360509|WDR72	ENSG00000166415|ENST00000360509|WDR72	ENSG00000166415|ENST00000360509|WDR72	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.26708984375	3	407.267686	1218.78123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.29	1	27.035	26.535	27.535	-0.25465								0	0	0	0.45132	1	1574	1574		53.089	15.581	1				17049	6193	11553	11562	19737	19737					0.18058808007549487
IKIDPGIL	8	Unmodified	_IKIDPGIL_					0	0	0			REV__nc|ENSG00000107186|O75970-5|MPDZ	REV__nc|ENSG00000107186|O75970-5|MPDZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78009033203125	2	434.778754	867.542954	-0.16786	-7.298E-05	3.2465	0.0014115	3.0786	0.0013385	434.78010256924983	60.312	3.0151	60.298	58.141	61.156	-0.013729					170	93	2	0	0	0	0.81548	1	5670	5670		20.482	1.1219	1	231370	+		17050	17649	11554	11563	19738	19738					0.10388447425293634
IKIIAPLHFC	10	Unmodified	_IKIIAPLHFC_					0	0	0		ENST00000261263.4_1_12:72180442-72180526:+|nuORF	ENST00000261263.4_1_12:72180442-72180526:+|nuORF	ENST00000261263.4_1_12:72180442-72180526:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.7816162109375	2	577.841362	1153.66817	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.522	1	31.505	31.005	32.005	-0.017466								0	0	0	0.45132	1	1442	1442		21.96	1.013	1				17051	9405	11555	11564	19739	19739					0.09748416290017303
IKIITPPE	8	Unmodified	_IKIITPPE_					0	0	0		ENST00000502306.1_1_5:15451780-15451825:+|nuORF	ENST00000502306.1_1_5:15451780-15451825:+|nuORF	ENST00000502306.1_1_5:15451780-15451825:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.7847595214844	2	455.784036	909.553519	0.24537	0.00011184	1.5761	0.00071834	1.8214	0.00083018	455.7845952256007	43.663	2.0162	43.719	42.984	45	0.056747					86	48	2	0	0	0	0.81548	1	3029	3029		20.482	1.1219	1	228040			17052	12850	11556	11565	19740	19740					0.09512430079701062
IKILARGFCV	10	Unmodified	_IKILARGFCV_					0	0	0		ENSG00000007314|ENST00000435607|SCN4A	ENSG00000007314|ENST00000435607|SCN4A	ENSG00000007314|ENST00000435607|SCN4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3428344726562	2	560.338987	1118.66342	4.0718	0.0022816	-1.2617	-0.00070696	2.8101	0.0015746	560.3383031375719	105.17	1.3811	105.39	104.93	106.31	0.2268					61	36	2	0	0	0	0.8608	1	12801	12801		34.173	0.65696	1	113700			17053	725	11557	11566	19741	19741					0.10883532147249753
IKILPIET	8	Unmodified	_IKILPIET_					0	0	0			REV__nc|ENSG00000155719|Q7RTW8-2|OTOA	REV__nc|ENSG00000155719|Q7RTW8-2|OTOA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.80084228515625	2	463.799686	925.584819	-0.22039	-0.00010222	2.8768	0.0013343	2.6564	0.0012321	463.80077563915114	45.485	0.74849	45.417	45.021	45.77	-0.068634					44	18	3	0	0	0	0.84341	1	3265	3265		24.203	1.1603	1	207040	+		17054	20440	11558	11567	19742	19742					0.11905003113804469
IKILYGRTKR	10	Unmodified	_IKILYGRTKR_					0	0	0			REV__ENSG00000196862|ENST00000408999|RGPD4	REV__ENSG00000196862|ENST00000408999|RGPD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.6034240722656	3	416.603068	1246.78738	1.074	0.00044741	-0.86626	-0.00036089	0.20769	8.6524E-05	416.60266150990174	28.146	0.49157	27.891	27.632	28.123	-0.25465					22	11	2	0	0	0	0.86621	1	1694	1694		26.063	1.8316	1	84462	+		17055	20335	11559	11568	19743	19743					0.17385326239059395
IKILYGRTKR	10	Unmodified	_IKILYGRTKR_					0	0	0			REV__ENSG00000196862|ENST00000408999|RGPD4	REV__ENSG00000196862|ENST00000408999|RGPD4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	416.603068	1246.78738	-0.036775	-1.5321E-05	0.16951	7.0617E-05	0.13273	5.5297E-05	416.60304786171923	28.07	0.51836	27.973	27.707	28.225	-0.096947	0.040823	0.00092032	NaN	26.063	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100160	+		17056	20335	11559	11568							0.17385326239059395
IKILYGRTKR	10	Unmodified	_IKILYGRTKR_					0	0	0			REV__ENSG00000196862|ENST00000408999|RGPD4	REV__ENSG00000196862|ENST00000408999|RGPD4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	416.603068	1246.78738	1.074	0.00044741	-0.86626	-0.00036089	0.20769	8.6524E-05	416.60266150990174	28.146	0.49157	27.891	27.632	28.123	-0.25465	-0.040823	-0.00037419	NaN	26.063	22	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84462	+		17057	20335	11559	11568							0.17385326239059395
IKIPKSSAM	9	Unmodified	_IKIPKSSAM_					0	0	0			REV__nc|ENSG00000173210|O94929-2|ABLIM3	REV__nc|ENSG00000173210|O94929-2|ABLIM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7908020019531	2	487.788795	973.563038	-0.085708	-4.1808E-05	3.6076	0.0017597	3.5219	0.0017179	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.77244	1	8215	8215		32.812	6.0163	1	514950	+		17058	21901	11560	11569	19744	19744					0.0751987509358969
IKIPKSSAM	9	Unmodified	_IKIPKSSAM_					0	0	0			REV__nc|ENSG00000173210|O94929-2|ABLIM3	REV__nc|ENSG00000173210|O94929-2|ABLIM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7911682128906	2	487.788795	973.563038	0.54993	0.00026825	3.015	0.0014707	3.565	0.001739	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.67345	1	8415	8415		42.396	10.441	1	633420	+		17059	21901	11560	11569	19745	19745					0.0751987509358969
IKIPKSSAM	9	Unmodified	_IKIPKSSAM_					0	0	0			REV__nc|ENSG00000173210|O94929-2|ABLIM3	REV__nc|ENSG00000173210|O94929-2|ABLIM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7906494140625	2	487.788795	973.563038	0.84663	0.00041298	2.8765	0.0014031	3.7232	0.0018161	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.51307	1	8675	8675		51.335	10.557	1	2238600	+		17060	21901	11560	11569	19746	19746					0.0751987509358969
IKIPKSSAM	9	Unmodified	_IKIPKSSAM_					0	0	0			REV__nc|ENSG00000173210|O94929-2|ABLIM3	REV__nc|ENSG00000173210|O94929-2|ABLIM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.79034423828125	2	487.788795	973.563038	-0.71212	-0.00034736	4.1832	0.0020405	3.4711	0.0016932	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.78983	1	7889	7889		27.882	1.0861	1	678280	+		17061	21901	11560	11569	19747	19747					0.0751987509358969
IKIPKSSAM	9	Unmodified	_IKIPKSSAM_					0	0	0			REV__nc|ENSG00000173210|O94929-2|ABLIM3	REV__nc|ENSG00000173210|O94929-2|ABLIM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7906188964844	2	487.788795	973.563038	0.64552	0.00031488	3.0925	0.0015085	3.738	0.0018234	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.51307	5	8117	8117;8200;8212;8260;8272		51.335	18.938	1	1929300	+		17062	21901	11560	11569	19748;19749;19750;19751;19752	19748					0.0751987509358969
IKIPKSSAM	9	Unmodified	_IKIPKSSAM_					0	0	0			REV__nc|ENSG00000173210|O94929-2|ABLIM3	REV__nc|ENSG00000173210|O94929-2|ABLIM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.794189453125	2	487.788795	973.563038	-0.48923	-0.00023864	4.277	0.0020863	3.7878	0.0018476	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.73802	1	9844	9844		37.812	7.3079	1	1599600	+		17063	21901	11560	11569	19753	19753					0.0751987509358969
IKIPKSSAM	9	Unmodified	_IKIPKSSAM_					0	0	0			REV__nc|ENSG00000173210|O94929-2|ABLIM3	REV__nc|ENSG00000173210|O94929-2|ABLIM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7917175292969	2	487.788795	973.563038	-0.24073	-0.00011743	4.0932	0.0019966	3.8524	0.0018792	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.67345	3	9877	9738;9877;9925		42.396	6.6555	1	1981400	+		17064	21901	11560	11569	19754;19755;19756	19755					0.0751987509358969
IKIQKKLARH	10	Unmodified	_IKIQKKLARH_					0	0	0		AluSq_dup8757|chr9:63818918-63819225:+|1.0047830359722725|0.3783450592878827|1.41|63.0|1|1|sense	AluSq_dup8757|chr9:63818918-63819225:+|1.0047830359722725|0.3783450592878827|1.41|63.0|1|1|sense	AluSq_dup8757|chr9:63818918-63819225:+|1.0047830359722725|0.3783450592878827|1.41|63.0|1|1|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76678466796875	3	412.275063	1233.80336	-0.28095	-0.00011583	-4.248	-0.0017513	-4.5289	-0.0018672	412.2732861290449	42.056	0.77018	42.01	41.67	42.44	-0.045471					28	21	2	0	0	0	0.37624	1	2804	2804		7.3997	0	1	62749			17065	6	11561	11570	19757	19757					0.19581032475980464
IKIQKKLARH	10	Unmodified	_IKIQKKLARH_					0	0	0		AluSq_dup8757|chr9:63818918-63819225:+|1.0047830359722725|0.3783450592878827|1.41|63.0|1|1|sense	AluSq_dup8757|chr9:63818918-63819225:+|1.0047830359722725|0.3783450592878827|1.41|63.0|1|1|sense	AluSq_dup8757|chr9:63818918-63819225:+|1.0047830359722725|0.3783450592878827|1.41|63.0|1|1|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7665710449219	3	412.275063	1233.80336	-0.19262	-7.9414E-05	-3.9924	-0.0016459	-4.185	-0.0017254	412.60755558136856	39.61	0.83955	39.562	39.135	39.975	-0.04789					33	21	2	0	0	0	0.37624	1	2455	2455		14.694	1.1857	1	85691			17066	6	11561	11570	19758	19758					0.19581032475980464
IKITLSAFE	9	Unmodified	_IKITLSAFE_					0	0	0		ENSG00000168038|ENST00000301831|ULK4	ENSG00000168038|ENST00000301831|ULK4	ENSG00000168038|ENST00000301831|ULK4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.52166748046875	2	511.30005	1020.58555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.188	1	69.317	68.817	69.817	0.1291								0	0	0	0.31117	1	6255	6255		26.693	3.6504	1				17067	6361	11562	11571	19759	19759					0.07607797762852897
IKIVPPPA	8	Unmodified	_IKIVPPPA_					0	0	0			REV__ENSG00000072422|ENST00000337910|RHOBTB1	REV__ENSG00000072422|ENST00000337910|RHOBTB1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.774658203125	2	417.776014	833.537475	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.403	1	65.528	65.028	66.028	0.12532								0	0	0	0.30004	1	5813	5813		21.702	7.0382	1		+		17068	16647	11563	11572	19760	19760					0.11404768633462936
IKKAAVSIVF	10	Unmodified	_IKKAAVSIVF_					0	0	0			REV__ENST00000498446.1_1_10:93247340-93247547:+|nuORF	REV__ENST00000498446.1_1_10:93247340-93247547:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.326904296875	2	538.347335	1074.68012	-0.54092	-0.0002912	3.7062	0.0019952	3.1653	0.001704	538.850471335117	101.32	0.24582	101.32	101.24	101.49	0					12	5	3	0	0	0	0.37624	1	10329	10329		34.173	12.213	1	121050	+		17069	27789	11564	11573	19761	19761					0.14576356304837645
IKKACYIH	8	Unmodified	_IKKACYIH_					0	0	0		chr16:11877580-11880068|17|20.24|0.81|4.65|-|0|TE_info:L1MB2,L1MB2_dup7118,L1,LINE,donor,-,11880068,11880490|GSPT1,None|7	chr16:11877580-11880068|17|20.24|0.81|4.65|-|0|TE_info:L1MB2,L1MB2_dup7118,L1,LINE,donor,-,11880068,11880490|GSPT1,None|7	chr16:11877580-11880068|17|20.24|0.81|4.65|-|0|TE_info:L1MB2,L1MB2_dup7118,L1,LINE,donor,-,11880068,11880490|GSPT1,None|7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.2782897949219	2	488.275855	974.537157	1.3919	0.00067965	3.9231	0.0019155	5.315	0.0025952	488.277606515528	98.478	0.69511	98.855	98.532	99.227	0.37679					39	16	3	0	0	0	0.89567	1	11908	11908		57.453	8.0111	1	769710			17070	197	11565	11574	19762	19762					0.048870256419377256
IKKACYIH	8	Unmodified	_IKKACYIH_					0	0	0		chr16:11877580-11880068|17|20.24|0.81|4.65|-|0|TE_info:L1MB2,L1MB2_dup7118,L1,LINE,donor,-,11880068,11880490|GSPT1,None|7	chr16:11877580-11880068|17|20.24|0.81|4.65|-|0|TE_info:L1MB2,L1MB2_dup7118,L1,LINE,donor,-,11880068,11880490|GSPT1,None|7	chr16:11877580-11880068|17|20.24|0.81|4.65|-|0|TE_info:L1MB2,L1MB2_dup7118,L1,LINE,donor,-,11880068,11880490|GSPT1,None|7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	488.275855	974.537157	1.3128	0.00064103	3.9776	0.0019421	5.2904	0.0025832	488.2776623060009	98.483	0.77476	98.845	98.441	99.216	0.36136	-0.0050222	2.0413E-05	NaN	57.453	46	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	766350			17071	197	11565	11574							0.048870256419377256
IKKAHGFRKL	10	Unmodified	_IKKAHGFRKL_					0	0	0		chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15;chr6:27841661-27852109|62|16.63|0.85|4.28|+|ENST00000606613|H2BC15,H2BC15	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3800048828125	2	599.382574	1196.7506	-1.2913	-0.00077396	-2.8515	-0.0017091	-4.1427	-0.0024831	599.3806932084216	103.36	2.8938	103.47	103.07	105.96	0.11494					245	72	6	0	0	0	0.8608	1	10925	10925		34.173	3.8548	1	20299000			17072	473	11566	11575	19763	19763					0.16009074413159396
IKKAKYITT	9	Unmodified	_IKKAKYITT_					0	0	0			REV__nc|ENSG00000168116|Q9HCI6-2|KIAA1586	REV__nc|ENSG00000168116|Q9HCI6-2|KIAA1586	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.3402099609375	2	533.336967	1064.65938	3.0971	0.0016518	2.9068	0.0015503	6.0039	0.0032021	533.3384140007198	99.339	2.8367	99.285	98.69	101.53	-0.053741					182	66	5	0	0	0	0.7932	2	10805	10805;10867		26.693	6.3181	1	3163800	+		17073	21462	11567	11576	19764;19765	19764					0.12963765925155712
IKKAPIQTY	9	Unmodified	_IKKAPIQTY_					0	0	0		ENSG00000095485|ENST00000354105|CWF19L1	ENSG00000095485|ENST00000354105|CWF19L1	ENSG00000095485|ENST00000354105|CWF19L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.3190307617188	2	531.321317	1060.62808	-0.033063	-1.7567E-05	-3.6466	-0.0019375	-3.6797	-0.0019551	531.3191547732448	95.172	2.5483	95.24	94.714	97.262	0.068336					181	59	5	0	0	0	0.7932	1	9933	9933		23.042	0	1	3878900			17074	1728	11568	11577	19766	19766					0.1001919289108173
IKKCYVEF	8	Unmodified	_IKKCYVEF_					0	0	0			REV__ENSG00000132549|ENST00000357162|VPS13B	REV__ENSG00000132549|ENST00000357162|VPS13B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.321044921875	2	515.275521	1028.53649	-0.68782	-0.00035442	2.6536	0.0013673	1.9657	0.0010129	515.2767579496931	72.878	0.57777	73.263	72.917	73.495	0.38581					20	13	2	0	0	0	0.4196	1	8109	8109		45.952	0	1	148490	+		17075	19011	11569	11578	19767	19767					0.023361862022284186
IKKEQKIYT	9	Unmodified	_IKKEQKIYT_					0	0	0			REV__L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|103|3|sense	REV__L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|103|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8427734375	2	575.845156	1149.67576	-1.368	-0.00078774	-2.3653	-0.001362	-3.7333	-0.0021498	575.8436459594299	90.372	2.9394	90.548	88.581	91.52	0.1758					221	69	4	0	0	0	0.7932	1	8933	8933		25.574	1.3422	1	2135900	+		17076	29474	11570	11579	19768	19768					0.10690847091291289
IKKERSPRPQ	10	Unmodified	_IKKERSPRPQ_					0	0	0		nc|ENSG00000153317|Q9ULH1-2|ASAP1;ENSG00000153317|ENST00000518721|ASAP1	nc|ENSG00000153317|Q9ULH1-2|ASAP1	nc|ENSG00000153317|Q9ULH1-2|ASAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8700561523438	2	619.870028	1237.7255	0.62564	0.00038782	-1.552	-0.00096205	-0.92638	-0.00057423	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.86587	1	10253	10253		29.17	5.6474	1	4779100			17077	5232	11571	11580	19769	19769					0.11614974819917734
IKKERSPRPQ	10	Unmodified	_IKKERSPRPQ_					0	0	0		nc|ENSG00000153317|Q9ULH1-2|ASAP1;ENSG00000153317|ENST00000518721|ASAP1	nc|ENSG00000153317|Q9ULH1-2|ASAP1	nc|ENSG00000153317|Q9ULH1-2|ASAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8682861328125	2	619.870028	1237.7255	1.6172	0.0010025	-2.8457	-0.001764	-1.2285	-0.00076151	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.86272	1	11261	11261		24.519	0.99649	1	1541100			17078	5232	11571	11580	19770	19770					0.11614974819917734
IKKGKSLFTG	10	Unmodified	_IKKGKSLFTG_					0	0	0		ENST00000463512.5_1_3:28368296-28390095:-|nuORF	ENST00000463512.5_1_3:28368296-28390095:-|nuORF	ENST00000463512.5_1_3:28368296-28390095:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.8320922851562	2	539.834591	1077.65463	-0.19544	-0.00010551	-3.7687	-0.0020345	-3.9641	-0.00214	539.832406828333	95.236	2.2447	95.304	94.755	97	0.068344					122	52	4	0	0	0	0.86218	1	9936	9936		32.812	8.6097	1	1265100			17079	12067	11572	11581	19771	19771					0.11890881782414908
IKKGKSLFTG	10	Unmodified	_IKKGKSLFTG_					0	0	0		ENST00000463512.5_1_3:28368296-28390095:-|nuORF	ENST00000463512.5_1_3:28368296-28390095:-|nuORF	ENST00000463512.5_1_3:28368296-28390095:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.8322143554688	2	539.834591	1077.65463	0.08212	4.4331E-05	-4.0814	-0.0022033	-3.9993	-0.0021589	539.8322432387479	94.902	1.7416	95.133	94.611	96.352	0.23103					104	41	4	0	0	0	0.80179	1	9715	9715		39.253	2.0937	1	1001200			17080	12067	11572	11581	19772	19772					0.11890881782414908
IKKIASETTLL	11	Unmodified	_IKKIASETTLL_					0	0	0			REV__ENST00000480924.3_1_12:87563815-87564172:-|nuORF	REV__ENST00000480924.3_1_12:87563815-87564172:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.25848388671875	3	406.255223	1215.74384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.108	1	68.071	67.571	68.571	-0.036301								0	0	0	0.56276	1	6557	6557		12.433	1.846	1		+		17081	27428	11573	11582	19773	19773					0.14459671951271957
IKKIRTGES	9	Unmodified	_IKKIRTGES_					0	0	0			REV__ENSG00000156136|ENST00000286648|DCK	REV__ENSG00000156136|ENST00000286648|DCK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3137817382812	2	516.314023	1030.61349	0.65847	0.00033998	-0.85995	-0.000444	-0.20148	-0.00010403	516.3134870113196	32.951	1.4307	33.121	32.721	34.151	0.16971					82	33	3	0	0	0	0.7932	1	2339	2339		26.693	4.733	1	426400	+		17082	20471	11574	11583	19774	19774					0.09941120742928433
IKKKAGPK	8	Unmodified	_IKKKAGPK_					0	0	0			REV__ENSG00000183035|ENST00000329312|CYLC1	REV__ENSG00000183035|ENST00000329312|CYLC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3000793457031	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.83058	1	6984	6984		12.959	2.7744	1	1702600	+		17083	22571	11575	11584	19775	19775					0.14627262273359065
IKKKAGPK	8	Unmodified	_IKKKAGPK_					0	0	0			REV__ENSG00000183035|ENST00000329312|CYLC1	REV__ENSG00000183035|ENST00000329312|CYLC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3003845214844	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.80706	2	6610	6557;6610		19.36	10.538	1	2081500	+		17084	22571	11575	11584	19776;19777	19777					0.14627262273359065
IKKKAGPK	8	Unmodified	_IKKKAGPK_					0	0	0			REV__ENSG00000183035|ENST00000329312|CYLC1	REV__ENSG00000183035|ENST00000329312|CYLC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.29986572265625	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.83058	2	6737	6616;6737		12.959	3.4886	1	1819800	+		17085	22571	11575	11584	19778;19779	19779					0.14627262273359065
IKKKAGPK	8	Unmodified	_IKKKAGPK_					0	0	0			REV__ENSG00000183035|ENST00000329312|CYLC1	REV__ENSG00000183035|ENST00000329312|CYLC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3002624511719	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.83646	1	6542	6542		12.207	3.3845	1	1852500	+		17086	22571	11575	11584	19780	19780					0.14627262273359065
IKKKKIWDIWN	11	Unmodified	_IKKKKIWDIWN_					0	0	0			REV__ENSG00000121314|ENST00000240615|TAS2R8	REV__ENSG00000121314|ENST00000240615|TAS2R8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.2991943359375	3	491.297645	1470.87111	-0.76336	-0.00037504	3.6438	0.0017902	2.8804	0.0014152	491.29933539010557	107.82	1.2119	107.82	106.66	107.87	0					54	28	4	0	0	0	0.7896	1	11227	11227		13.508	0.55046	1	112740000	+		17087	18450	11576	11585	19781	19781					0.15450437616141244
IKKKKIWDIWN	11	Unmodified	_IKKKKIWDIWN_					0	0	0			REV__ENSG00000121314|ENST00000240615|TAS2R8	REV__ENSG00000121314|ENST00000240615|TAS2R8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2994689941406	3	491.297645	1470.87111	2.8446	0.0013975	-0.53368	-0.00026219	2.3109	0.0011353	491.29732308943403	107.89	0.72864	107.86	107.19	107.92	-0.031487					50	17	5	0	0	0	0.7896	1	11963	11963		13.508	1.5756	1	160890000	+		17088	18450	11576	11585	19782	19782					0.15450437616141244
IKKKKIWDIWN	11	Unmodified	_IKKKKIWDIWN_					0	0	0			REV__ENSG00000121314|ENST00000240615|TAS2R8	REV__ENSG00000121314|ENST00000240615|TAS2R8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.29888916015625	3	491.297645	1470.87111	2.8436	0.001397	0.12355	6.0698E-05	2.9671	0.0014577	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.74405	2	12413	12413;12998		23.378	13.732	1	3274400	+		17089	18450	11576	11585	19783;19784	19783					0.15450437616141244
IKKKKIWDIWN	11	Unmodified	_IKKKKIWDIWN_					0	0	0			REV__ENSG00000121314|ENST00000240615|TAS2R8	REV__ENSG00000121314|ENST00000240615|TAS2R8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.2989501953125	3	491.297645	1470.87111	-0.9047	-0.00044448	3.7739	0.0018541	2.8692	0.0014096	491.2994332720357	107.88	0.3661	107.92	107.6	107.97	0.035622					36	8	6	0	0	0	0.7896	1	11861	11861		13.508	3.8618	1	152940000	+		17090	18450	11576	11585	19785	19785					0.15450437616141244
IKKKKIWDIWN	11	Unmodified	_IKKKKIWDIWN_					0	0	0			REV__ENSG00000121314|ENST00000240615|TAS2R8	REV__ENSG00000121314|ENST00000240615|TAS2R8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.6337890625	3	491.297645	1470.87111	1.5862	0.00077931	0.99873	0.00049067	2.585	0.00127	491.29802857581404	107.86	0.44553	107.95	107.57	108.01	0.084457					33	17	4	0	0	0	0.79716	1	13157	13157		11.932	2.2862	1	9542600	+		17091	18450	11576	11585	19786	19786					0.15450437616141244
IKKKKKSFSIN	11	Unmodified	_IKKKKKSFSIN_					0	0	0			REV__ENST00000366813.1_1_1:226259189-226259267:+|nuORF	REV__ENST00000366813.1_1_1:226259189-226259267:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2544250488281	3	440.950245	1319.82891	0.43752	0.00019293	3.5757	0.0015767	4.0132	0.0017696	440.9517471874314	66.941	0.64114	67.067	66.872	67.513	0.1265					44	26	2	0	0	0	0.1767	1	5964	5964		18.531	9.3192	1	72329	+		17092	25537	11577	11586	19787	19787					0.18178462207765733
IKKKKMAS	8	Unmodified	_IKKKKMAS_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.3005065917969	2	467.29933	932.584108	0.70104	0.0003276	2.5728	0.0012023	3.2738	0.0015298	467.30045163542593	92.969	1.3775	93.128	92.624	94.001	0.15875					82	32	4	0	0	0	0.83058	1	9443	9443		12.959	4.1369	1	836050			17093	7421	11578	11587	19788	19788					0.11511885193101534
IKKKKVSI	8	Unmodified	_IKKKKVSI_					0	0	0		nc|ENSG00000198929|O75052-3|NOS1AP;ENSG00000198929|ENST00000361897|NOS1AP	nc|ENSG00000198929|O75052-3|NOS1AP	nc|ENSG00000198929|O75052-3|NOS1AP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2876281738281	2	472.33677	942.658987	-1.705	-0.00080535	-0.93626	-0.00044223	-2.6413	-0.0012476	472.33679474796384	95.285	0.414	95.488	95.393	95.807	0.20242					16	9	3	0	0	0	0.4196	1	9728	9728		1.3276	0	1	124410			17094	8372	11579	11588	19789	19789					0.18536390995984675
IKKKLEHGL	9	Unmodified	_IKKKLEHGL_					0	0	0		ENST00000441602.5_1_7:92883193-92979232:+|nuORF;nc|ENSG00000004766|Q96JG6-3|VPS50;ENSG00000004766|ENST00000305866|VPS50;ENST00000471188.5_1_7:92887656-92969983:+|nuORF	ENST00000441602.5_1_7:92883193-92979232:+|nuORF	ENST00000441602.5_1_7:92883193-92979232:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.3399047851562	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.74721	1	10084	10084		37.159	1.5408	1	1199500			17095	664	11580	11589	19790	19790					0.1408658801931324
IKKKLSKLT	9	Unmodified	_IKKKLSKLT_					0	0	0			REV__ENST00000399586.2_1_X:74960734-74966719:-|nuORF	REV__ENST00000399586.2_1_X:74960734-74966719:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.63232421875	2	529.868434	1057.72232	0.27523	0.00014584	-2.1651	-0.0011472	-1.8898	-0.0010014	530.3677987599756	39.037	0.11084	39.125	39.034	39.145	0.088375					4	2	2	0	0	0	0.20789	1	2356	2356		14.137	4.4315	1	27315	+		17096	26231	11581	11590	19791	19791					0.19576331713210493
IKKKREFVF	9	Unmodified	_IKKKREFVF_					0	0	0			REV__ENST00000205061.9_2_16:74481415-74481883:-|nuORF	REV__ENST00000205061.9_2_16:74481415-74481883:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8558959960938	2	597.871508	1193.72846	0.83472	0.00049906	2.2634	0.0013532	3.0981	0.0018523	597.8725174579719	93.779	0.12799	93.94	93.834	93.962	0.16118					4	2	2	0	0	0	0.20789	1	9548	9548		23.042	0	1	42560	+		17097	24102	11582	11591	19792	19792					0.13934849944735106
IKKLKEAPPI	10	Unmodified	_IKKLKEAPPI_					0	0	0		ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8533325195312	2	568.873717	1135.73288	-0.3637	-0.0002069	-1.6731	-0.00095176	-2.0368	-0.0011587	568.8731543206789	102.57	0.31735	102.57	102.43	102.75	0					13	7	3	0	0	0	0.37624	1	10508	10508		37.812	0	1	430600			17098	3051	11583	11592	19793	19793					0.1704431436764935
IKKLKEAPPI	10	Unmodified	_IKKLKEAPPI_					0	0	0		ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8532104492188	2	568.873717	1135.73288	0.52207	0.00029699	0.37469	0.00021315	0.89675	0.00051014	568.8736922066519	102.19	0.92052	102.39	101.97	102.89	0.19484					41	22	3	0	0	0	0.37624	1	10740	10740		49.442	28.495	1	601960			17099	3051	11583	11592	19794	19794					0.1704431436764935
IKKMIEVAS	9	Unmodified	_IKKMIEVAS_					0	0	0			REV__ENSG00000100784|ENST00000614987|RPS6KA5	REV__ENSG00000100784|ENST00000614987|RPS6KA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8034973144531	2	509.801903	1017.58925	-0.073627	-3.7535E-05	3.6181	0.0018445	3.5444	0.001807	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.55097	1	10097	10097		49.442	6.5773	1	3087300	+		17100	17219	11584	11593	19795	19795					0.08116144265056846
IKKMLSNP	8	Unmodified	_IKKMLSNP_					0	0	0			REV__ENST00000562272.5_1_16:23691188-23701381:+|nuORF	REV__ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.777587890625	2	465.775688	929.536823	-0.087401	-4.0709E-05	4.1075	0.0019132	4.0201	0.0018725	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.89494	1	8311	8311		37.159	3.6435	1	1330000	+		17101	28794	11585	11594	19796	19796					0.06923605922099796
IKKMVLLNKM	10	Unmodified	_IKKMVLLNKM_					0	0	0			REV__ENST00000282251.9_1_11:107299924-107299972:-|nuORF	REV__ENST00000282251.9_1_11:107299924-107299972:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.5878601074219	3	406.587262	1216.73996	0.5758	0.00023411	0.41631	0.00016926	0.99211	0.00040338	406.5873508642622	24.247	1.5285	24.302	23.869	25.398	0.055485					100	43	4	0	0	0	0.85441	2	928	913;928		35.152	4.5832	1	404210	+		17102	24612	11586	11595	19797;19798	19798					0.1402558765221329
IKKPISDIF	9	Unmodified	_IKKPISDIF_					0	0	0			REV__ENSG00000151023|ENST00000331161|ENKUR	REV__ENSG00000151023|ENST00000331161|ENKUR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8206787109375	2	530.823692	1059.63283	-0.88248	-0.00046844	-3.9714	-0.0021081	-4.8539	-0.0025765	530.821384723199	80.761	1.5978	80.761	80.141	81.738	0					159	57	4	0	0	0	0.76255	2	7434	7434;7506		35.618	7.736	1	2196600	+		17103	20234	11587	11596	19799;19800	19799					0.10540077033851958
IKKPISDIF	9	Unmodified	_IKKPISDIF_					0	0	0			REV__ENSG00000151023|ENST00000331161|ENKUR	REV__ENSG00000151023|ENST00000331161|ENKUR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.82080078125	2	530.823692	1059.63283	-0.85098	-0.00045172	-4.1464	-0.002201	-4.9974	-0.0026527	530.8213432265311	82.745	2.1308	82.745	82.264	84.395	0					134	52	5	0	0	0	0.51307	1	7721	7721		51.335	14.176	1	4119600	+		17104	20234	11587	11596	19801	19801					0.10540077033851958
IKKPISDIF	9	Unmodified	_IKKPISDIF_					0	0	0			REV__ENSG00000151023|ENST00000331161|ENKUR	REV__ENSG00000151023|ENST00000331161|ENKUR	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	530.823692	1059.63283	-1.3153	-0.00069821	-4.3307	-0.0022989	-5.646	-0.0029971	530.821502391275	82.322	1.7995	82.448	81.931	83.731	0.12601	-0.089548	0.00097987	NaN	51.335	101	41	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1875200	+		17105	20234	11587	11596							0.10540077033851958
IKKPKFHY	8	Unmodified	_IKKPKFHY_					0	0	0			REV__ENSG00000117000|ENST00000372771|RLF	REV__ENSG00000117000|ENST00000372771|RLF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.8207397460938	2	530.818744	1059.62294	0.78062	0.00041437	3.3736	0.0017908	4.1542	0.0022051	530.820404965767	82.475	1.248	82.534	82.031	83.279	0.059166					76	28	4	0	0	0	0.92457	1	8277	8277		47.916	6.489	1	1356800	+		17106	18241	11588	11597	19802	19802					0.09550933819127749
IKKPNSVP	8	Unmodified	_IKKPNSVP_					0	0	0		nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;ENSG00000064042|ENST00000503057|LIMCH1	nc|ENSG00000064042|Q9UPQ0-9|LIMCH1	nc|ENSG00000064042|Q9UPQ0-9|LIMCH1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78802490234375	2	441.774003	881.533452	-0.082175	-3.6303E-05	-1.9659	-0.00086847	-2.048	-0.00090477	441.77134789025655	39.652	0.15729	39.604	39.535	39.692	-0.04789					5	3	2	0	0	0	0.4196	1	2441	2441		31.955	7.7521	1	17237			17107	1097	11589	11598	19803	19803					0.08794679139748496
IKKQKANIFVP	11	Unmodified	_IKKQKANIFVP_					0	0	0		ENSG00000188649|ENST00000646931|CC2D2B;nc|ENSG00000188649|Q6DHV5-4|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4050903320312	2	643.403173	1284.79179	1.7783	0.0011441	2.5766	0.0016578	4.3549	0.0028019	643.4046886151041	105.77	1.7293	105.8	105.04	106.77	0.038322					167	40	5	0	0	0	0.6921	1	11667	11667		32.812	0.061884	1	14066000			17108	7945	11590	11599	19804	19804					0.1607879066195892
IKKQLVPQKQ	10	Unmodified	_IKKQLVPQKQ_					0	0	0		nc|ENSG00000137968|Q8NCS7|SLC44A5	nc|ENSG00000137968|Q8NCS7|SLC44A5	nc|ENSG00000137968|Q8NCS7|SLC44A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9281005859375	3	403.92744	1208.76049	0.25224	0.00010189	2.3681	0.00095656	2.6204	0.0010584	403.92827500047315	43.269	1.3362	43.703	43.17	44.506	0.4334					104	32	4	0	0	0	0.86621	1	3914	3914		26.063	2.6855	1	3935700			17109	14949	11591	11600	19805	19805					0.16446217627890292
IKKQRLATFF	10	Unmodified	_IKKQRLATFF_					0	0	0		nc|ENSG00000131831|Q9Y5P3-2|RAI2;ENSG00000131831|ENST00000451717|RAI2	nc|ENSG00000131831|Q9Y5P3-2|RAI2	nc|ENSG00000131831|Q9Y5P3-2|RAI2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3829956054688	2	626.38224	1250.74993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.94	1	117.85	117.35	118.35	-0.088509								0	0	0	0.45132	1	12704	12704		24.519	1.9395	1				17110	3751	11592	11601	19806	19806					0.13458234973427352
IKKREELFLLQ	11	Unmodified	_IKKREELFLLQ_					0	0	0		nc|ENSG00000116852|O75037-3|KIF21B;ENSG00000116852|ENST00000461742|KIF21B;nc|ENSG00000116852|O75037-2|KIF21B;nc|ENSG00000116852|O75037|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.9576416015625	3	472.957288	1415.85004	0.74004	0.00035001	-0.21623	-0.00010227	0.52381	0.00024774	472.9572235267456	34.131	1.5761	34.341	33.44	35.016	0.21002					95	37	4	0	0	0	0.73277	1	2498	2498		25.892	6.2648	1	2079600			17111	2951	11593	11602	19807	19807					0.15874427516587275
IKKRRRWWFRS	11	Unmodified	_IKKRRRWWFRS_					0	0	0		ENST00000229634.13_1_6:126136448-126199430:+|nuORF	ENST00000229634.13_1_6:126136448-126199430:+|nuORF	ENST00000229634.13_1_6:126136448-126199430:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.316650390625	3	540.323299	1617.94807	1.3911	0.00075166	-4.0831	-0.0022062	-2.6919	-0.0014545	540.6560439905179	105.45	1.7981	105.61	104.38	106.18	0.15583					79	47	3	0	0	0	0.81219	1	12816	12816		8.7993	5.3906	1	294080			17112	9209	11594	11603	19808	19808					0.16381093675818192
IKKRRRWWFRS	11	Unmodified	_IKKRRRWWFRS_					0	0	0		ENST00000229634.13_1_6:126136448-126199430:+|nuORF	ENST00000229634.13_1_6:126136448-126199430:+|nuORF	ENST00000229634.13_1_6:126136448-126199430:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	540.323299	1617.94807	0.10085	5.4493E-05	-2.7286	-0.0014743	-2.6277	-0.0014198	540.6566087385563	105.62	0.98521	105.78	105.29	106.27	0.15924	0.042851	0.0011205	NaN	8.7993	54	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	330180			17113	9209	11594	11603							0.16381093675818192
IKKRRRWWFRS	11	Unmodified	_IKKRRRWWFRS_					0	0	0		ENST00000229634.13_1_6:126136448-126199430:+|nuORF	ENST00000229634.13_1_6:126136448-126199430:+|nuORF	ENST00000229634.13_1_6:126136448-126199430:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	540.323299	1617.94807	0.84235	0.00045514	-3.3656	-0.0018185	-2.5232	-0.0013633	540.9912160578028	105.71	0.96185	105.82	105.35	106.31	0.10765	0.083876	8.8015E-05	NaN	8.7993	44	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200150			17114	9209	11594	11603							0.16381093675818192
IKKRSLFRRMH	11	Unmodified	_IKKRSLFRRMH_					0	0	0			REV__ENSG00000027847|ENST00000029410|B4GALT7	REV__ENSG00000027847|ENST00000029410|B4GALT7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.298583984375	3	491.297873	1470.87179	0.79409	0.00039014	1.2583	0.00061818	2.0523	0.0010083	491.2983578004565	110.36	1.7546	110.43	110.06	111.81	0.073685					124	58	3	0	0	0	0.80361	1	11992	11992		10.587	0.94066	1	390370	+		17115	16265	11595	11604	19809	19809					0.1551895378415793
IKKSIEGVRQK	11	Unmodified	_IKKSIEGVRQK_					0	0	0			REV__ENSG00000136546|ENST00000643258|SCN7A	REV__ENSG00000136546|ENST00000643258|SCN7A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.3777465820312	2	643.401161	1284.78777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.91	1	112.88	112.38	113.38	-0.032333								0	0	0	0.56276	1	12048	12048		8.6937	0.45861	1		+		17116	19320	11596	11605	19810	19810					0.15676701168263207
IKKTGVVFGAS	11	Unmodified	_IKKTGVVFGAS_					0	0	0		nc|ENSG00000115310|Q9NQC3-2|RTN4;nc|ENSG00000115310|Q9NQC3-5|RTN4;ENSG00000115310|ENST00000337526|RTN4;nc|ENSG00000115310|Q9NQC3-4|RTN4;nc|ENSG00000115310|Q9NQC3-3|RTN4;nc|ENSG00000115310|Q9NQC3-6|RTN4	nc|ENSG00000115310|Q9NQC3-2|RTN4	nc|ENSG00000115310|Q9NQC3-2|RTN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.829833984375	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.65746	1	8776	8776		37.812	4.9991	1	2008100			17117	2833	11597	11606	19811	19811					0.10094577919812764
IKKTGVVFGAS	11	Unmodified	_IKKTGVVFGAS_					0	0	0		nc|ENSG00000115310|Q9NQC3-2|RTN4;nc|ENSG00000115310|Q9NQC3-5|RTN4;ENSG00000115310|ENST00000337526|RTN4;nc|ENSG00000115310|Q9NQC3-4|RTN4;nc|ENSG00000115310|Q9NQC3-3|RTN4;nc|ENSG00000115310|Q9NQC3-6|RTN4	nc|ENSG00000115310|Q9NQC3-2|RTN4	nc|ENSG00000115310|Q9NQC3-2|RTN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8304443359375	2	553.832049	1105.64954	0.37109	0.00020552	-3.8764	-0.0021469	-3.5053	-0.0019414	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.65746	1	10397	10397		37.812	5.061	1	1786500			17118	2833	11597	11606	19812	19812					0.10094577919812764
IKKVGSLMA	9	Unmodified	_IKKVGSLMA_					0	0	0			REV__MER92-int_dup937|chr22:50799208-50799654:-|1.017030345513651|0.2548607445478844|2.0|63.0|29|1|anti-sense	REV__MER92-int_dup937|chr22:50799208-50799654:-|1.017030345513651|0.2548607445478844|2.0|63.0|29|1|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.7929992675781	2	473.791338	945.568123	-0.10621	-5.0322E-05	4.3597	0.0020656	4.2535	0.0020153	473.7932210078017	89.08	1.7961	89.148	88.673	90.469	0.068161					85	41	4	0	0	0	0.72402	1	9091	9091		38.806	1.647	1	479680	+		17119	29659	11598	11607	19813	19813					0.09316178956214571
IKKVKKKKKK	10	Unmodified	_IKKVKKKKKK_					0	0	0		ENSG00000187257|ENST00000334955|RSBN1L	ENSG00000187257|ENST00000334955|RSBN1L	ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.316162109375	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.868	1	26.868	26.368	27.368	0								0	0	0	0.45132	1	1044	1044		1.8869	1.4039	1				17120	7851	11599	11608	19814	19814					0.3054822610067731
IKKVKKKKKK	10	Unmodified	_IKKVKKKKKK_					0	0	0		ENSG00000187257|ENST00000334955|RSBN1L	ENSG00000187257|ENST00000334955|RSBN1L	ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.316162109375	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.53	1	115.46	114.96	115.96	-0.072342								0	0	0	0.45132	1	12457	12457		0.48304	0.48304	1				17121	7851	11599	11608	19815	19815					0.3054822610067731
IKKVKKKKKK	10	Unmodified	_IKKVKKKKKK_					0	0	0		ENSG00000187257|ENST00000334955|RSBN1L	ENSG00000187257|ENST00000334955|RSBN1L	ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.3154296875	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.067	1	25.029	24.529	25.529	-0.037178								0	0	0	0.45132	1	967	967		1.8869	1.4039	1				17122	7851	11599	11608	19816	19816					0.3054822610067731
IKKVKKKKKK	10	Unmodified	_IKKVKKKKKK_					0	0	0		ENSG00000187257|ENST00000334955|RSBN1L	ENSG00000187257|ENST00000334955|RSBN1L	ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.31732177734375	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.03	1	113.13	112.63	113.63	0.10638								0	0	0	0.45132	1	12148	12148		1.7563	1.2733	1				17123	7851	11599	11608	19817	19817					0.3054822610067731
IKKVKKKKKK	10	Unmodified	_IKKVKKKKKK_					0	0	0		ENSG00000187257|ENST00000334955|RSBN1L	ENSG00000187257|ENST00000334955|RSBN1L	ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.3154602050781	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.6	1	114.7	114.2	115.2	0.098114								0	0	0	0.45132	1	12256	12256		1.8869	1.3592	1				17124	7851	11599	11608	19818	19818					0.3054822610067731
IKKVNLARRSG	11	Unmodified	_IKKVNLARRSG_					0	0	0		ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3931274414062	2	621.39367	1240.77279	-0.078752	-4.8936E-05	-1.4235	-0.00088457	-1.5023	-0.0009335	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.7144	1	10937	10937		29.17	8.2231	1	10411000			17125	12425	11600	11609	19819	19819					0.16203254090919472
IKKVNLARRSG	11	Unmodified	_IKKVNLARRSG_					0	0	0		ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3927001953125	2	621.39367	1240.77279	-0.28789	-0.0001789	-1.2764	-0.00079315	-1.5643	-0.00097204	621.392781910036	104.72	2.6015	104.71	104.23	106.84	-0.014809					230	61	5	0	0	0	0.69995	2	11314	11314;11362		31.53	4.7437	1	11881000			17126	12425	11600	11609	19820;19821	19820					0.16203254090919472
IKKVNLARRSG	11	Unmodified	_IKKVNLARRSG_					0	0	0		ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3927001953125	2	621.39367	1240.77279	1.3	0.00080781	-2.832	-0.0017598	-1.532	-0.00095195	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.69995	1	11043	11043		31.53	1.2121	1	23079000			17127	12425	11600	11609	19822	19822					0.16203254090919472
IKKVNLARRSG	11	Unmodified	_IKKVNLARRSG_					0	0	0		ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3926391601562	2	621.39367	1240.77279	-1.2196	-0.00075786	-0.45293	-0.00028145	-1.6726	-0.0010393	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.69995	1	10994	10994		31.53	4.4825	1	23459000			17128	12425	11600	11609	19823	19823					0.16203254090919472
IKKVNLARRSG	11	Unmodified	_IKKVNLARRSG_					0	0	0		ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3932495117188	2	621.39367	1240.77279	-1.2196	-0.00075786	0.58312	0.00036235	-0.6365	-0.00039552	621.3939066015827	106.23	1.0134	106.28	106.14	107.15	0.053757					87	23	4	0	0	0	0.69995	2	11322	11322;11375		31.53	2.3598	1	1823300			17129	12425	11600	11609	19824;19825	19824					0.16203254090919472
IKKVNLARRSG	11	Unmodified	_IKKVNLARRSG_					0	0	0		ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	ENST00000479978.5_1_22:41614103-41614259:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.3923950195312	2	621.39367	1240.77279	2.1086	0.0013103	-3.2264	-0.0020048	-1.1178	-0.00069459	621.3915992412323	104.3	2.0291	104.48	104.04	106.07	0.18888					138	51	4	0	0	0	0.7434	1	12670	12670		23.523	0.48021	1	1168000			17130	12425	11600	11609	19826	19826					0.16203254090919472
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.9909973144531	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.812	1	74.937	74.437	75.437	0.12545								0	0	0	0.56276	1	6931	6931		3.2113	0.18535	1		+		17131	22068	11601	11610	19827	19827					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.994140625	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.104	1	75.191	74.691	75.691	0.087631								0	0	0	0.56276	1	6942	6942		5.1424	0.25623	1		+		17132	22068	11601	11610	19828	19828					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.99267578125	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.706	1	72.09	71.59	72.59	0.38449								0	0	0	0.56276	1	7988	7988		16.53	13.319	1		+		17133	22068	11601	11610	19829	19829					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.9931640625	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.782	1	72.167	71.667	72.667	0.38449								0	0	0	0.56276	1	7999	7999		8.0344	6.7124	1		+		17134	22068	11601	11610	19830	19830					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.9933166503906	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.942	1	72.327	71.827	72.827	0.38581								0	0	0	0.56276	1	8022	8022		2.8518	2.4804	1		+		17135	22068	11601	11610	19831	19831					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.992431640625	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.12	1	72.506	72.006	73.006	0.38581								0	0	0	0.56276	1	8048	8048		5.4129	4.091	1		+		17136	22068	11601	11610	19832	19832					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.99285888671875	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.419	1	72.805	72.305	73.305	0.38581								0	0	0	0.56276	1	8091	8091		3.026	0.17417	1		+		17137	22068	11601	11610	19833	19833					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.99261474609375	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.182	1	73.57	73.07	74.07	0.38779								0	0	0	0.56276	1	8202	8202		2.534	1.1153	1		+		17138	22068	11601	11610	19834	19834					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.99200439453125	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.534	1	72.084	71.584	72.584	0.55008								0	0	0	0.56276	1	7997	7997		11.932	10.514	1		+		17139	22068	11601	11610	19835	19835					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.99261474609375	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.617	1	72.167	71.667	72.667	0.55008								0	0	0	0.56276	1	8009	8009		7.3413	4.13	1		+		17140	22068	11601	11610	19836	19836					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.9923400878906	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.769	1	72.319	71.819	72.819	0.55008								0	0	0	0.56276	1	8031	8031		1.2319	0.23404	1		+		17141	22068	11601	11610	19837	19837					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.99237060546875	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.774	1	73.328	72.828	73.828	0.55386								0	0	0	0.56276	1	8177	8177		2.8518	1.4331	1		+		17142	22068	11601	11610	19838	19838					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.9925231933594	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.843	1	73.397	72.897	73.897	0.55386								0	0	0	0.56276	1	8187	8187		2.8518	1.6199	1		+		17143	22068	11601	11610	19839	19839					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.9925537109375	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.098	1	73.652	73.152	74.152	0.55386								0	0	0	0.56276	1	8225	8225		3.026	1.8777	1		+		17144	22068	11601	11610	19840	19840					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.991455078125	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.251	1	73.805	73.305	74.305	0.55386								0	0	0	0.56276	1	8249	8249		3.2113	0.18535	1		+		17145	22068	11601	11610	19841	19841					0.2579322787255478
IKKVRRKTKKF	11	Unmodified	_IKKVRRKTKKF_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.99163818359375	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.352	1	73.906	73.406	74.406	0.55386								0	0	0	0.56276	1	8265	8265		4.8861	3.5642	1		+		17146	22068	11601	11610	19842	19842					0.2579322787255478
IKKVVIFGPER	11	Unmodified	_IKKVVIFGPER_					0	0	0			REV__nc|ENSG00000164830|Q8N573-5|OXR1	REV__nc|ENSG00000164830|Q8N573-5|OXR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4050903320312	2	643.403173	1284.79179	0.024155	1.5542E-05	4.4022	0.0028324	4.4263	0.0028479	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.64498	1	11043	11043		39.253	5.0803	1	11188000	+		17147	21120	11602	11611	19843	19843					0.16078790662004394
IKKVVIFGPER	11	Unmodified	_IKKVVIFGPER_					0	0	0			REV__nc|ENSG00000164830|Q8N573-5|OXR1	REV__nc|ENSG00000164830|Q8N573-5|OXR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.404296875	2	643.403173	1284.79179	2.6785	0.0017233	1.5954	0.0010265	4.2739	0.0027498	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.69995	2	11813	11619;11813		31.53	4.8369	1	14704000	+		17148	21120	11602	11611	19844;19845	19845					0.16078790662004394
IKKVVIFGPER	11	Unmodified	_IKKVVIFGPER_					0	0	0			REV__nc|ENSG00000164830|Q8N573-5|OXR1	REV__nc|ENSG00000164830|Q8N573-5|OXR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.40478515625	2	643.403173	1284.79179	2.6792	0.0017238	3.2892	0.0021163	5.9684	0.0038401	643.4052640495355	107.03	1.0145	106.99	106.79	107.81	-0.034134					59	23	3	0	0	0	0.70737	3	11943	11859;11932;11943		30.318	4.7437	1	2103900	+		17149	21120	11602	11611	19846;19847;19848	19848					0.16078790662004394
IKKVVIFGPER	11	Unmodified	_IKKVVIFGPER_					0	0	0			REV__nc|ENSG00000164830|Q8N573-5|OXR1	REV__nc|ENSG00000164830|Q8N573-5|OXR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4054565429688	2	643.403173	1284.79179	1.7783	0.0011441	2.5766	0.0016578	4.3549	0.0028019	643.4046886151041	105.77	1.7293	105.8	105.04	106.77	0.038322					167	40	5	0	0	0	0.60058	1	11643	11643		44.377	6.5657	1	14066000	+		17150	21120	11602	11611	19849	19849					0.16078790662004394
IKKVVIFGPER	11	Unmodified	_IKKVVIFGPER_					0	0	0			REV__nc|ENSG00000164830|Q8N573-5|OXR1	REV__nc|ENSG00000164830|Q8N573-5|OXR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4061279296875	2	643.403173	1284.79179	1.6039	0.001032	2.8597	0.0018399	4.4636	0.0028719	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.64498	6	11359	11336;11359;11370;11444;11482;11542		39.253	5.9558	1	21138000	+		17151	21120	11602	11611	19850;19851;19852;19853;19854;19855	19851					0.16078790662004394
IKKVVIFGPER	11	Unmodified	_IKKVVIFGPER_					0	0	0			REV__nc|ENSG00000164830|Q8N573-5|OXR1	REV__nc|ENSG00000164830|Q8N573-5|OXR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4059448242188	2	643.403173	1284.79179	0.94326	0.0006069	3.082	0.001983	4.0253	0.0025899	643.4049918963857	105.64	1.1738	105.75	104.98	106.16	0.10766					144	29	6	0	0	0	0.64498	2	11298	11238;11298		39.253	3.639	1	23114000	+		17152	21120	11602	11611	19856;19857	19857					0.16078790662004394
IKKVVIFGPER	11	Unmodified	_IKKVVIFGPER_					0	0	0			REV__nc|ENSG00000164830|Q8N573-5|OXR1	REV__nc|ENSG00000164830|Q8N573-5|OXR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4058837890625	2	643.403173	1284.79179	0.94326	0.0006069	4.1966	0.0027001	5.1399	0.003307	643.4057417471539	106.19	1.8486	106.29	106.11	107.96	0.099007					180	44	5	0	0	0	0.64498	4	11393	11393;11454;11537;11550		39.253	5.0803	1	16037000	+		17153	21120	11602	11611	19858;19859;19860;19861	19858					0.16078790662004394
IKLEGYNVY	9	Unmodified	_IKLEGYNVY_					0	0	0		nc|ENSG00000188107|Q5T1H1|EYS;ENSG00000188107|ENST00000503581|EYS	nc|ENSG00000188107|Q5T1H1|EYS	nc|ENSG00000188107|Q5T1H1|EYS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.7965087890625	2	549.795132	1097.57571	-0.22795	-0.00012533	0.1441	7.9226E-05	-0.083849	-4.6099E-05	549.7950385770134	54.895	0.88051	55.464	55.153	56.033	0.56836					46	20	4	0	0	0	0.19818	1	5614	5614		74.255	2.3776	1	1459500			17154	15168	11603	11612	19862	19862					0.030826097574845335
IKLEPIKSRAP	11	Unmodified	_IKLEPIKSRAP_					0	0	0		ENSG00000169118|ENST00000303052|CSNK1G1;nc|ENSG00000169118|Q9HCP0-2|CSNK1G1;ENSG00000133275|ENST00000255641|CSNK1G2	ENSG00000169118|ENST00000303052|CSNK1G1	ENSG00000169118|ENST00000303052|CSNK1G1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3917846679688	2	626.392805	1250.77106	2.3084	0.0014459	4.3102	0.0026999	6.6186	0.0041458	626.3953217408156	109.92	1.4097	109.98	109.55	110.95	0.06794					99	57	2	0	0	0	0.67778	1	13267	13267		35.152	11.629	1	615360			17155	6470	11604	11613	19863	19863					0.15570200282331825
IKLERREKQ	9	Unmodified	_IKLERREKQ_					0	0	0			REV__nc|ENSG00000003987|Q9Y216-2|MTMR7	REV__nc|ENSG00000003987|Q9Y216-2|MTMR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.9150085449219	3	400.578811	1198.7146	3.1807	0.0012741	1.1216	0.00044928	4.3022	0.0017234	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.7932	1	12568	12568		24.519	0.99649	1	88404	+		17156	16055	11605	11614	19864	19864					0.12319572445653648
IKLETIDGARF	11	Unmodified	_IKLETIDGARF_					0	0	0			REV__ENSG00000179151|ENST00000315127|EDC3	REV__ENSG00000179151|ENST00000315127|EDC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.5738525390625	3	421.574955	1261.70304	2.6263	0.0011072	-2.3845	-0.0010052	0.24183	0.00010195	421.57387911137397	28.574	0.39856	28.555	28.398	28.796	-0.019405					13	9	2	0	0	0	0.72892	1	1398	1398		26.75	1.6237	1	14062	+		17157	22319	11606	11615	19865	19865					0.0826533063163879
IKLETIDGARF	11	Unmodified	_IKLETIDGARF_					0	0	0			REV__ENSG00000179151|ENST00000315127|EDC3	REV__ENSG00000179151|ENST00000315127|EDC3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	421.574955	1261.70304	-0.3494	-0.0001473	0.91546	0.00038593	0.56605	0.00023863	421.57529495907676	28.478	0.25446	28.438	28.349	28.603	-0.039907	-0.058369	0.00077498	NaN	26.75	12	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17198	+		17158	22319	11606	11615							0.0826533063163879
IKLFFKKTKPL	11	Unmodified	_IKLFFKKTKPL_					0	0	0		ENST00000409458.3_2_7:23296839-23297073:+|nuORF	ENST00000409458.3_2_7:23296839-23297073:+|nuORF	ENST00000409458.3_2_7:23296839-23297073:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.9664306640625	3	454.967236	1361.87988	-0.85763	-0.00039019	0.024217	1.1018E-05	-0.83341	-0.00037918	454.96706899495365	41.367	1.3426	41.373	40.948	42.29	0.0065727					90	33	4	0	0	0	0.79224	1	3068	3068		12.957	4.1582	1	458770			17159	11309	11607	11616	19866	19866					0.2134141125259248
IKLFLRGRPSV	11	Unmodified	_IKLFLRGRPSV_					0	0	0		ENST00000479185.1_1_2:218746916-218750490:-|nuORF	ENST00000479185.1_1_2:218746916-218750490:-|nuORF	ENST00000479185.1_1_2:218746916-218750490:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4056396484375	2	643.408789	1284.80303	0.024155	1.5542E-05	-4.3274	-0.0027843	-4.3033	-0.0027688	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.60058	3	10922	10922;11006;11030		44.377	5.1244	1	11188000			17160	12404	11608	11617	19867;19868;19869	19867					0.17201612756116447
IKLFLRGRPSV	11	Unmodified	_IKLFLRGRPSV_					0	0	0		ENST00000479185.1_1_2:218746916-218750490:-|nuORF	ENST00000479185.1_1_2:218746916-218750490:-|nuORF	ENST00000479185.1_1_2:218746916-218750490:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4055786132812	2	643.408789	1284.80303	-0.02708	-1.7423E-05	-4.4647	-0.0028726	-4.4917	-0.00289	643.4057840301668	105.94	1.5968	105.91	105.23	106.82	-0.025146					165	37	6	0	0	0	0.62614	1	11489	11489		41.427	2.1738	1	14580000			17161	12404	11608	11617	19870	19870					0.17201612756116447
IKLFLRGRPSV	11	Unmodified	_IKLFLRGRPSV_					0	0	0		ENST00000479185.1_1_2:218746916-218750490:-|nuORF	ENST00000479185.1_1_2:218746916-218750490:-|nuORF	ENST00000479185.1_1_2:218746916-218750490:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.405517578125	2	643.408789	1284.80303	-1.1464	-0.0007376	-3.4117	-0.0021951	-4.5581	-0.0029327	643.406459620359	105.63	1.1927	105.7	104.97	106.16	0.073112					153	29	6	0	0	0	0.58425	2	11128	11128;11141		45.972	6.7194	1	22367000			17162	12404	11608	11617	19871;19872	19871					0.17201612756116447
IKLFLRGRPSV	11	Unmodified	_IKLFLRGRPSV_					0	0	0		ENST00000479185.1_1_2:218746916-218750490:-|nuORF	ENST00000479185.1_1_2:218746916-218750490:-|nuORF	ENST00000479185.1_1_2:218746916-218750490:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4060668945312	2	643.408789	1284.80303	-1.1464	-0.0007376	-2.6841	-0.001727	-3.8305	-0.0024646	643.4069214023369	106.26	1.0134	106.32	106.14	107.15	0.053749					110	23	5	0	0	0	0.64498	2	11273	11273;11343		39.253	12.56	1	13678000			17163	12404	11608	11617	19873;19874	19873					0.17201612756116447
IKLFLRGRPSV	11	Unmodified	_IKLFLRGRPSV_					0	0	0		ENST00000479185.1_1_2:218746916-218750490:-|nuORF	ENST00000479185.1_1_2:218746916-218750490:-|nuORF	ENST00000479185.1_1_2:218746916-218750490:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4056396484375	2	643.408789	1284.80303	-1.1464	-0.00073758	-1.7594	-0.001132	-2.9057	-0.0018696	643.4076175151858	107.74	0.83601	107.77	107.1	107.93	0.036125					77	20	5	0	0	0	0.58425	4	11505	11423;11481;11493;11505		45.972	19.279	1	3329000			17164	12404	11608	11617	19875;19876;19877;19878	19878					0.17201612756116447
IKLGLERFHGV	11	Unmodified	_IKLGLERFHGV_					0	0	0		nc|ENSG00000130377|Q5FVE4-2|ACSBG2;ENSG00000130377|ENST00000588485|ACSBG2	nc|ENSG00000130377|Q5FVE4-2|ACSBG2	nc|ENSG00000130377|Q5FVE4-2|ACSBG2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8814086914062	2	634.877322	1267.74009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.19	1	119.11	118.61	119.61	-0.07531								0	0	0	0.56276	1	12783	12783		41.427	7.505	1				17165	3641	11609	11618	19879	19879					0.1169304696807103
IKLHKILPLK	10	Unmodified	_IKLHKILPLK_					0	0	0		L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|120|3|sense	L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|120|3|sense	L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|120|3|sense	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	601.9214477539062	2	601.921001	1201.82745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.954	1	28.954	28.454	29.454	0								0	0	0	0.45132	1	1232	1232		26.693	10.22	1				17166	14621	11610	11619	19880	19880					0.23460872909640784
IKLKAAKGSFH	11	Unmodified	_IKLKAAKGSFH_					0	0	0		chr3:85726548-85802047|16|18.81|0.46|5.34|+|0|CADM2,CADM2|1	chr3:85726548-85802047|16|18.81|0.46|5.34|+|0|CADM2,CADM2|1	chr3:85726548-85802047|16|18.81|0.46|5.34|+|0|CADM2,CADM2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5799255371094	3	400.580152	1198.71863	3.1807	0.0012741	-2.2259	-0.00089164	0.9548	0.00038247	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.74771	1	12654	12654		22.562	1.7244	1	88404			17167	409	11611	11620	19881	19881					0.1272166193934936
IKLKKKRKRSY	11	Unmodified	_IKLKKKRKRSY_					0	0	0		ENSG00000153006|ENST00000513458|SREK1IP1	ENSG00000153006|ENST00000513458|SREK1IP1	ENSG00000153006|ENST00000513458|SREK1IP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7287292480469	3	483.324305	1446.95109	-0.75803	-0.00036637	0.48156	0.00023275	-0.27647	-0.00013363	483.6589267230131	72.78	1.3274	73.165	72.167	73.495	0.38581					39	31	2	0	0	0	0.18307	1	8082	8082		11.455	4.795	1	135130			17168	5207	11612	11621	19882	19882					0.24548924009968687
IKLKKKRKRSY	11	Unmodified	_IKLKKKRKRSY_					0	0	0		ENSG00000153006|ENST00000513458|SREK1IP1	ENSG00000153006|ENST00000513458|SREK1IP1	ENSG00000153006|ENST00000513458|SREK1IP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7287292480469	3	483.324305	1446.95109	-0.42869	-0.0002072	0.067863	3.28E-05	-0.36082	-0.0001744	483.324248027183	74.751	1.1009	75.315	74.68	75.781	0.56458					44	26	2	0	0	0	0.18258	1	8391	8391		2.8518	0	1	120060			17169	5207	11612	11621	19883	19883					0.24548924009968687
IKLPSFRWS	9	Unmodified	_IKLPSFRWS_					0	0	0		nc|ENSG00000185567|Q8IVF2-3|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2	nc|ENSG00000185567|Q8IVF2-3|AHNAK2	nc|ENSG00000185567|Q8IVF2-3|AHNAK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.330322265625	2	567.326934	1132.63931	2.937	0.0016662	2.4805	0.0014072	5.4174	0.0030735	567.3281928791553	117.74	0.69537	117.71	117.25	117.94	-0.02433					30	23	2	0	0	0	0.7932	1	13053	13053		25.574	2.9944	1	79498			17170	7725	11613	11622	19884	19884					0.07830014985233902
IKLQGRHH	8	Unmodified	_IKLQGRHH_					0	0	0			REV__ENSG00000154174|ENST00000284320|TOMM70	REV__ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.79302978515625	2	494.793592	987.572632	-0.22625	-0.00011195	-1.0513	-0.00052017	-1.2775	-0.00063211	494.7928986334224	26.563	0.76746	26.524	26.237	27.004	-0.038525					33	17	3	0	0	0	0.884	1	1227	1227		33.516	1.5607	1	99666	+		17171	20372	11614	11623	19885	19885					0.07834824213989577
IKLQLRIKKL	10	Unmodified	_IKLQLRIKKL_					0	0	0		L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|175|3|sense	L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|175|3|sense	L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|175|3|sense	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2982177734375	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.308	1	69.443	68.943	69.943	0.13522								0	0	0	0.45132	1	6261	6261		4.0829	0.6742	1				17172	14662	11615	11624	19886	19886					0.25959946829675573
IKLRSYCPTK	10	Unmodified	_IKLRSYCPTK_					0	0	0		L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|76|2|sense	L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|76|2|sense	L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|76|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.8463745117188	2	604.844633	1207.67471	1.0466	0.00063305	1.555	0.00094052	2.6016	0.0015736	604.845452875801	96.207	3.1756	96.438	95.308	98.483	0.23103					209	74	4	0	0	0	0.86047	1	9883	9883		23.523	0.48021	1	585990			17173	14555	11616	11625	19887	19887					0.079183094507016
IKLTDRVQAR	10	Unmodified	_IKLTDRVQAR_					0	0	0			REV__CON__Q28107	REV__CON__Q28107	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.5802917480469	3	400.578811	1198.7146	-0.18596	-7.4493E-05	4.3127	0.0017276	4.1267	0.0016531	400.58045429984315	118.58	0.28901	118.5	118.43	118.71	-0.07531					12	9	2	0	0	0	0.85259	1	12730	12730		20.03	1.4994	1	294660	+	+	17174	16002	11617	11626	19888	19888					0.12319572445653648
IKLTDRVQAR	10	Unmodified	_IKLTDRVQAR_					0	0	0			REV__CON__Q28107	REV__CON__Q28107	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.57958984375	3	400.578811	1198.7146	5.5428	0.0022203	-1.2854	-0.00051489	4.2574	0.0017054	400.57819432887953	111.82	0.52379	111.85	111.7	112.22	0.032707					48	18	4	0	0	0	0.85441	1	13553	13553		20.837	0	1	3019100	+	+	17175	16002	11617	11626	19889	19889					0.12319572445653648
IKLVCRWKA	9	Unmodified	_IKLVCRWKA_					0	0	0			REV__nc|ENSG00000149925|P04075|ALDOA	REV__nc|ENSG00000149925|P04075|ALDOA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.84375	2	558.839154	1115.66375	1.3629	0.00076167	0.71847	0.00040151	2.0814	0.0011632	558.8395730036294	100.06	1.0606	100.11	99.546	100.61	0.047073					53	23	3	0	0	0	0.78058	1	10766	10766		30.504	0.18592	1	175400	+		17176	20197	11618	11627	19890	19890					0.11054951867095042
IKMFFHKINYW	11	Unmodified	_IKMFFHKINYW_					0	0	0		ENST00000367723.8_1_1:172579544-172579724:+|nuORF	ENST00000367723.8_1_1:172579544-172579724:+|nuORF	ENST00000367723.8_1_1:172579544-172579724:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2687683105469	3	509.60408	1525.79041	0.66398	0.00033837	-1.9301	-0.00098358	-1.2661	-0.00064521	509.6034046847023	17.328	0.22594	16.846	16.718	16.944	-0.48256					6	4	2	0	0	0	0.181	1	231	231		13.508	0	1	35087			17177	10566	11619	11628	19891	19891					0.04854833301578765
IKMFFHKINYW	11	Unmodified	_IKMFFHKINYW_					0	0	0		ENST00000367723.8_1_1:172579544-172579724:+|nuORF	ENST00000367723.8_1_1:172579544-172579724:+|nuORF	ENST00000367723.8_1_1:172579544-172579724:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	509.60408	1525.79041	0.92257	0.00047014	0.29633	0.00015101	1.2189	0.00062115	509.93940367842015	17.452	0.22381	16.842	16.706	16.929	-0.6107	-0.002076	0.0019428	NaN	13.508	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38206			17178	10566	11619	11628							0.04854833301578765
IKMLGTKQ	8	Unmodified	_IKMLGTKQ_					0	0	0			REV__chr12:80210886-80211949|16|19.38|0.52|5.21|+|2|OTOGL,OTOGL|2	REV__chr12:80210886-80211949|16|19.38|0.52|5.21|+|2|OTOGL,OTOGL|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.2400207519531	2	459.775688	917.536823	-0.86603	-0.00039818	1.818	0.00083588	0.95198	0.0004377	459.77610396535624	27.068	0.84702	26.892	26.477	27.324	-0.17559					21	18	2	0	0	0	0.4196	1	1543	1543		42.396	0	1	34328	+		17179	15556	11620	11629	19892	19892					0.07475605922104478
IKNITIKRHV	10	Unmodified	_IKNITIKRHV_					0	0	0			REV__ENST00000454074.5_1_7:112424834-112428532:-|nuORF	REV__ENST00000454074.5_1_7:112424834-112428532:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.9339599609375	3	407.931185	1220.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.91	1	22.97	22.47	23.47	0.060431								0	0	0	0.45132	1	731	731		20.837	4.8304	1		+		17180	26918	11621	11630	19893	19893					0.1701703972200903
IKNKKRKH	8	Unmodified	_IKNKKRKH_					0	0	0			REV__ENSG00000175931|ENST00000319380|UBE2O	REV__ENSG00000175931|ENST00000319380|UBE2O	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.361083984375	2	526.345992	1050.67743	-0.90394	-0.00047579	0.33131	0.00017439	-0.57263	-0.0003014	526.3473819608608	37.116	0.22233	37.127	36.973	37.195	0.011173					5	4	2	0	0	0	0.4196	1	2449	2449		35.201	3.2459	1	15160	+		17181	22092	11622	11631	19894	19894					0.15411945690539142
IKNLYRRFV	9	Unmodified	_IKNLYRRFV_					0	0	0			REV__ENSG00000121940|ENST00000369969|CLCC1	REV__ENSG00000121940|ENST00000369969|CLCC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.863525390625	2	604.866757	1207.71896	3.1995	0.0019352	-0.094645	-5.7248E-05	3.1048	0.001878	604.8668402656671	112.87	1.1902	112.84	112.7	113.89	-0.024811					43	32	2	0	0	0	0.7932	1	12524	12524		18.324	0.95945	1	550830	+		17182	18473	11623	11632	19895	19895					0.12341081659201336
IKNNILNHL	9	Unmodified	_IKNNILNHL_					0	0	0			REV__ENSG00000103035|ENST00000219313|PSMD7	REV__ENSG00000103035|ENST00000219313|PSMD7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.824462890625	2	539.822015	1077.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.324	1	39.879	39.379	40.379	0.55449								0	0	0	0.31828	1	3303	3303		24.203	1.1603	1		+		17183	17379	11624	11633	19896	19896					0.0937682697983746
IKNRTCLQLHK	11	Unmodified	_IKNRTCLQLHK_					0	0	0			REV__ENST00000471702.2_2_3:132406014-132407530:-|nuORF	REV__ENST00000471702.2_2_3:132406014-132407530:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9325256347656	3	451.930968	1352.77107	-0.1384	-6.2545E-05	3.984	0.0018005	3.8457	0.001738	451.93267141602934	99.223	2.3092	99.273	97.79	100.1	0.049828					147	53	3	0	0	0	0.72374	1	10495	10495		27.644	0.89421	1	486010	+		17184	27236	11625	11634	19897	19897					0.1087987701066595
IKNRTCLQLHK	11	Unmodified	_IKNRTCLQLHK_					0	0	0			REV__ENST00000471702.2_2_3:132406014-132407530:-|nuORF	REV__ENST00000471702.2_2_3:132406014-132407530:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.26715087890625	3	451.930968	1352.77107	1.2214	0.000552	2.5381	0.001147	3.7595	0.0016991	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.76579	1	10837	10837		18.531	0.69791	1	1043200	+		17185	27236	11625	11634	19898	19898					0.1087987701066595
IKNRTCLQLHK	11	Unmodified	_IKNRTCLQLHK_					0	0	0			REV__ENST00000471702.2_2_3:132406014-132407530:-|nuORF	REV__ENST00000471702.2_2_3:132406014-132407530:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.93280029296875	3	451.930968	1352.77107	2.1819	0.00098608	1.6411	0.00074167	3.823	0.0017277	451.9316131706083	100.36	1.9025	100.71	99.62	101.52	0.3459					138	47	4	0	0	0	0.75121	1	12274	12274		21.78	4.6137	1	885260	+		17186	27236	11625	11634	19899	19899					0.1087987701066595
IKNSKLCL	8	Unmodified	_IKNSKLCL_					0	0	0			REV__ENSG00000188993|ENST00000682860|LRRC66	REV__ENSG00000188993|ENST00000682860|LRRC66	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.7752685546875	2	459.775688	917.536823	-0.11372	-5.2287E-05	0.36594	0.00016825	0.25222	0.00011596	459.7757031479285	20.873	0.86124	20.245	19.901	20.762	-0.62835					44	21	3	0	0	0	0.90465	1	722	722		40.573	6.4001	1	238860	+		17187	23051	11626	11635	19900	19900					0.07475605922093109
IKPFKVGSRE	10	Unmodified	_IKPFKVGSRE_					0	0	0			REV__chr2:84906117-84906400|44|24.2|0.69|5.13|+|1|TMSB10,None|1	REV__chr2:84906117-84906400|44|24.2|0.69|5.13|+|1|TMSB10,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.8400268554688	2	580.842948	1159.67134	-0.70798	-0.00041123	-3.4414	-0.0019989	-4.1494	-0.0024101	580.8407660860938	69.805	0.83526	69.876	69.594	70.43	0.071045					106	41	3	0	0	0	0.86272	1	6313	6313		24.519	1.4767	1	12587000	+		17188	15768	11627	11636	19901	19901					0.09789382668395774
IKPHQKVY	8	Unmodified	_IKPHQKVY_					0	0	0		chr16:28843855-28843962|14|111.64|0.94|6.89|-|0|TUFM,None|1	chr16:28843855-28843962|14|111.64|0.94|6.89|-|0|TUFM,None|1	chr16:28843855-28843962|14|111.64|0.94|6.89|-|0|TUFM,None|1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8009338378906	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.438	1	51.438	50.938	51.938	0								0	0	0	0.30316	1	4166	4166		42.474	15.678	1				17189	203	11628	11637	19902	19902					0.08122056922411502
IKPILGLRRLA	11	Unmodified	_IKPILGLRRLA_					0	0	0			REV__ENST00000566151.1_1_16:84853614-84869924:+|nuORF	REV__ENST00000566151.1_1_16:84853614-84869924:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2906799316406	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.896	1	71.936	71.436	72.436	0.040222								0	0	0	0.56276	1	6907	6907		17.167	6.07	1		+		17190	28863	11629	11638	19903	19903					0.22494489652831362
IKPILGLRRLA	11	Unmodified	_IKPILGLRRLA_					0	0	0			REV__ENST00000566151.1_1_16:84853614-84869924:+|nuORF	REV__ENST00000566151.1_1_16:84853614-84869924:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2907409667969	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.639	1	72.681	72.181	73.181	0.042114								0	0	0	0.56276	1	6995	6995		17.833	1.1158	1		+		17191	28863	11629	11638	19904	19904					0.22494489652831362
IKPILGLRRLA	11	Unmodified	_IKPILGLRRLA_					0	0	0			REV__ENST00000566151.1_1_16:84853614-84869924:+|nuORF	REV__ENST00000566151.1_1_16:84853614-84869924:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2886962890625	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.915	1	72.957	72.457	73.457	0.042114								0	0	0	0.56276	1	7030	7030		5.6988	0	1		+		17192	28863	11629	11638	19905	19905					0.22494489652831362
IKPILGLRRLA	11	Unmodified	_IKPILGLRRLA_					0	0	0			REV__ENST00000566151.1_1_16:84853614-84869924:+|nuORF	REV__ENST00000566151.1_1_16:84853614-84869924:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.29034423828125	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.951	1	72.993	72.493	73.493	0.042114								0	0	0	0.56276	1	7035	7035		8.7993	0.39205	1		+		17193	28863	11629	11638	19906	19906					0.22494489652831362
IKPILGLRRLA	11	Unmodified	_IKPILGLRRLA_					0	0	0			REV__ENST00000566151.1_1_16:84853614-84869924:+|nuORF	REV__ENST00000566151.1_1_16:84853614-84869924:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.29095458984375	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.232	1	73.274	72.774	73.774	0.042114								0	0	0	0.56276	1	7072	7072		18.531	7.4343	1		+		17194	28863	11629	11638	19907	19907					0.22494489652831362
IKPLTFEAG	9	Unmodified	_IKPLTFEAG_					0	0	0			REV__ENSG00000267673|ENST00000393708|FDX2	REV__ENSG00000267673|ENST00000393708|FDX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.2784118652344	2	488.279118	974.543683	1.28	0.00062501	-2.679	-0.0013081	-1.399	-0.00068309	488.2776526897297	97.871	0.65971	98.257	97.847	98.507	0.38548					37	15	3	0	0	0	0.72402	1	11780	11780		38.806	3.1879	1	452980	+		17195	23970	11630	11639	19908	19908					0.055392420743373805
IKPLTFEAG	9	Unmodified	_IKPLTFEAG_					0	0	0			REV__ENSG00000267673|ENST00000393708|FDX2	REV__ENSG00000267673|ENST00000393708|FDX2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	488.279118	974.543683	1.28	0.00062501	-2.679	-0.0013081	-1.399	-0.00068309	488.2776526897297	97.871	0.65971	98.257	97.847	98.507	0.38548	-0.021378	4.4031E-05	NaN	38.806	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	452980	+		17196	23970	11630	11639							0.055392420743373805
IKPQLQLYPPI	11	Unmodified	_IKPQLQLYPPI_					0	0	0		ENSG00000249715|ENST00000624922|FER1L5;nc|ENSG00000249715|A0AVI2-4|FER1L5;nc|ENSG00000249715|A0AVI2-2|FER1L5	ENSG00000249715|ENST00000624922|FER1L5	ENSG00000249715|ENST00000624922|FER1L5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2673645019531	3	437.267463	1308.78056	1.089	0.00047619	-0.35859	-0.0001568	0.73042	0.00031939	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.76892	1	4796	4796		17.833	1.3033	1	2745300			17197	8839	11631	11640	19909	19909					0.13851968567837503
IKPQLQLYPPI	11	Unmodified	_IKPQLQLYPPI_					0	0	0		ENSG00000249715|ENST00000624922|FER1L5;nc|ENSG00000249715|A0AVI2-4|FER1L5;nc|ENSG00000249715|A0AVI2-2|FER1L5	ENSG00000249715|ENST00000624922|FER1L5	ENSG00000249715|ENST00000624922|FER1L5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.267578125	3	437.267463	1308.78056	-0.59734	-0.0002612	1.3171	0.00057591	0.71972	0.00031471	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.76892	1	4445	4445		17.833	1.1158	1	2564600			17198	8839	11631	11640	19910	19910					0.13851968567837503
IKQAKIHYIK	10	Unmodified	_IKQAKIHYIK_					0	0	0		ENSG00000163932|ENST00000330452|PRKCD;nc|ENSG00000163932|Q05655-2|PRKCD	ENSG00000163932|ENST00000330452|PRKCD	ENSG00000163932|ENST00000330452|PRKCD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3932495117188	2	621.390065	1240.76558	0.92125	0.00057246	4.2739	0.0026558	5.1952	0.0032282	621.3925512557826	106.19	2.0795	106.29	105.91	107.99	0.099007					149	50	5	0	0	0	0.85694	1	11387	11387		21.96	1.9631	1	2148500			17199	5885	11632	11641	19911	19911					0.15482521490480394
IKQAQTQK	8	Unmodified	_IKQAQTQK_					0	0	0			REV__ENST00000369285.7_2_10:115922747-115922840:-|nuORF	REV__ENST00000369285.7_2_10:115922747-115922840:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7802429199219	2	472.779816	943.545079	0.18537	8.764E-05	-0.02359	-1.1153E-05	0.16178	7.6487E-05	472.77972271657734	35.236	0.76236	35.342	34.989	35.751	0.10603					39	24	3	0	0	0	0.90983	1	1830	1830		42.396	1.618	1	190580	+		17200	25617	11633	11642	19912	19912					0.07104876163077734
IKQAQTQK	8	Unmodified	_IKQAQTQK_					0	0	0			REV__ENST00000369285.7_2_10:115922747-115922840:-|nuORF	REV__ENST00000369285.7_2_10:115922747-115922840:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	472.779816	943.545079	-1.0211	-0.00048274	1.1279	0.00053324	0.10681	5.0498E-05	472.78027170746844	35.414	0.7218	35.445	34.962	35.684	0.031132	0.073253	0.00027579	NaN	42.396	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176750	+		17201	25617	11633	11642							0.07104876163077734
IKQAQTQK	8	Unmodified	_IKQAQTQK_					0	0	0			REV__ENST00000369285.7_2_10:115922747-115922840:-|nuORF	REV__ENST00000369285.7_2_10:115922747-115922840:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	472.779816	943.545079	0.18537	8.764E-05	-0.02359	-1.1153E-05	0.16178	7.6487E-05	472.77972271657734	35.236	0.76236	35.342	34.989	35.751	0.10603	-0.029202	-0.000813	NaN	42.396	39	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	190580	+		17202	25617	11633	11642							0.07104876163077734
IKQATRILQH	10	Unmodified	_IKQATRILQH_					0	0	0		ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3663330078125	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.2	1	116.18	115.68	116.68	-0.02433								0	0	0	0.45132	1	12863	12863		31.53	15.057	1				17203	6755	11634	11643	19913	19913					0.12459876308253115
IKQATRILQH	10	Unmodified	_IKQATRILQH_					0	0	0		ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3665161132812	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.86047	1	12350	12350		23.523	3.5259	1	3346600			17204	6755	11634	11643	19914	19914					0.12459876308253115
IKQATRILQH	10	Unmodified	_IKQATRILQH_					0	0	0		ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3663330078125	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.82886	1	12688	12688		37.812	5.061	1	5984800			17205	6755	11634	11643	19915	19915					0.12459876308253115
IKQELHARR	9	Unmodified	_IKQELHARR_					0	0	0			REV__ENSG00000135090|ENST00000392533|TAOK3	REV__ENSG00000135090|ENST00000392533|TAOK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.843017578125	2	575.843813	1149.67307	0.61103	0.00035186	-2.2107	-0.001273	-1.5997	-0.00092115	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.72402	1	9180	9180		38.806	3.1879	1	6623700	+		17206	19191	11635	11644	19916	19916					0.10422436476960684
IKQGYLEKK	9	Unmodified	_IKQGYLEKK_					0	0	0		nc|ENSG00000141293|Q86WV1-2|SKAP1;ENSG00000141293|ENST00000336915|SKAP1	nc|ENSG00000141293|Q86WV1-2|SKAP1	nc|ENSG00000141293|Q86WV1-2|SKAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8299560546875	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.78983	1	8906	8906		27.882	0.83493	1	1844500			17207	4486	11636	11645	19917	19917					0.10094577919790026
IKQHKKKPL	9	Unmodified	_IKQHKKKPL_					0	0	0			REV__ENSG00000156006|ENST00000286479|NAT2	REV__ENSG00000156006|ENST00000286479|NAT2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3400268554688	2	560.371675	1118.7288	1.3866	0.00077702	-3.9949	-0.0022386	-2.6083	-0.0014616	560.3704067465962	102.18	0.52754	102.23	101.93	102.46	0.043198					22	12	3	0	0	0	0.20789	1	11000	11000		15.642	0	1	209600	+		17208	20460	11637	11646	19918	19918					0.17418269664608488
IKQIKQEP	8	Unmodified	_IKQIKQEP_					0	0	0		ENSG00000198963|ENST00000376896|RORB;nc|ENSG00000198963|Q92753|RORB	ENSG00000198963|ENST00000376896|RORB	ENSG00000198963|ENST00000376896|RORB	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.2962341308594	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.007	1	73.138	72.638	73.638	0.13064								0	0	0	0.29816	1	6720	6720		38.806	0	1				17209	8382	11638	11647	19919	19919					0.08914333339930636
IKQKLEAVKP	10	Unmodified	_IKQKLEAVKP_					0	0	0			REV__ENSG00000132763|ENST00000401061|MMACHC	REV__ENSG00000132763|ENST00000401061|MMACHC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3663940429688	2	577.368798	1152.72304	-0.31736	-0.00018324	-3.4769	-0.0020075	-3.7943	-0.0021907	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.8651	1	10521	10521		25.574	2.0514	1	6617600	+		17210	19028	11639	11648	19920	19920					0.1527912636227029
IKQKLEAVKP	10	Unmodified	_IKQKLEAVKP_					0	0	0			REV__ENSG00000132763|ENST00000401061|MMACHC	REV__ENSG00000132763|ENST00000401061|MMACHC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3662109375	2	577.368798	1152.72304	-1.363	-0.00078696	-2.7149	-0.0015675	-4.0779	-0.0023544	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.8651	1	10729	10729		25.574	1.3713	1	14386000	+		17211	19028	11639	11648	19921	19921					0.1527912636227029
IKQKPISIDSD	11	Unmodified	_IKQKPISIDSD_					0	0	0		nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;ENSG00000119487|ENST00000265960|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-4|MAPKAP1	nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1	nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	622.345947265625	2	622.34826	1242.68197	-1.2166	-0.00075714	-1.102	-0.00068582	-2.3186	-0.001443	622.3475745875962	95.767	2.795	95.97	95.191	97.986	0.20242					140	65	3	0	0	0	0.67778	1	9845	9845		35.152	0.97948	1	410920			17212	3072	11640	11649	19922	19922					0.07033320532150356
IKQKQIIPKN	10	Unmodified	_IKQKQIIPKN_					0	0	0		nc|ENSG00000099331|Q13459-2|MYO9B;ENSG00000099331|ENST00000682292|MYO9B	nc|ENSG00000099331|Q13459-2|MYO9B	nc|ENSG00000099331|Q13459-2|MYO9B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.3892211914062	2	605.387522	1208.76049	-0.1695	-0.00010262	4.0427	0.0024474	3.8732	0.0023448	605.389885541641	45.128	1.0384	45.108	44.704	45.742	-0.01984					44	23	2	0	0	0	0.86802	1	3529	3529		15.642	0	1	150490			17213	1757	11641	11650	19923	19923					0.16446217627890292
IKQLNAAVI	9	Unmodified	_IKQLNAAVI_					0	0	0			REV__ENSG00000198648|ENST00000355999|STK39;REV__ENSG00000172939|ENST00000311806|OXSR1	REV__ENSG00000198648|ENST00000355999|STK39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.304931640625	2	485.30821	968.601866	0.54019	0.00026216	-0.7974	-0.00038699	-0.25721	-0.00012483	485.3076614228541	33.419	0.67168	33.589	33.271	33.943	0.16971					29	15	3	0	0	0	0.62081	1	2399	2399		45.952	0	1	419320	+		17214	23351;21869	11642	11651	19924	19924					0.11630923719599195
IKQRLRGLLQ	10	Unmodified	_IKQRLRGLLQ_					0	0	0			REV__AluSx4_dup10437|chr19:55140497-55140779:+|1.3215989636666117|0.0092261732295309|7.16|62.0|11|3|sense	REV__AluSx4_dup10437|chr19:55140497-55140779:+|1.3215989636666117|0.0092261732295309|7.16|62.0|11|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9339904785156	3	408.934818	1223.78262	0.46238	0.00018908	-2.5602	-0.001047	-2.0978	-0.00085788	408.9337641207	16.291	0.68274	16.267	16.091	16.773	-0.024035					86	29	4	0	0	0	0.86106	1	147	147		33.922	5.8401	1	1069300	+		17215	15397	11643	11652	19925	19925					0.1796844209632127
IKQTLSIYL	9	Unmodified	_IKQTLSIYL_					0	0	0		nc|ENSG00000008394|P10620-2|MGST1	nc|ENSG00000008394|P10620-2|MGST1	nc|ENSG00000008394|P10620-2|MGST1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.8326416015625	2	539.828975	1077.6434	2.7941	0.0015083	3.6313	0.0019603	6.4254	0.0034686	539.830784350364	95.087	2.072	95.029	94.598	96.67	-0.057526					123	48	4	0	0	0	0.74721	1	10130	10130		37.159	1.5408	1	1548000			17216	14736	11644	11653	19926	19926					0.10768059688257381
IKQVMEHIWKL	11	Unmodified	_IKQVMEHIWKL_					0	0	0		ENST00000475707.5_1_3:15045421-15079667:+|nuORF;ENSG00000177463|ENST00000425241|NR2C2;nc|ENSG00000177463|P49116-2|NR2C2	ENST00000475707.5_1_3:15045421-15079667:+|nuORF	ENST00000475707.5_1_3:15045421-15079667:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.6081848144531	3	475.607602	1423.80098	-0.27695	-0.00013172	1.9005	0.0009039	1.6236	0.00077218	475.60838787756666	49.925	0.49713	50.77	50.477	50.974	0.84501					31	11	4	0	0	0	0.70847	1	4911	4911		30.139	5.9073	1	1156000			17217	7142	11645	11654	19927	19927					0.10602815956008271
IKRALNSVPVI	11	Unmodified	_IKRALNSVPVI_					0	0	0		ENST00000504949.1_1_5:95067575-95091515:+|nuORF;ENSG00000164292|ENST00000379982|RHOBTB3	ENST00000504949.1_1_5:95067575-95091515:+|nuORF	ENST00000504949.1_1_5:95067575-95091515:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9289245605469	3	403.92744	1208.76049	0.5143	0.00020774	4.1381	0.0016715	4.6524	0.0018792	403.92898888715627	45.158	1.872	45.621	44.495	46.367	0.46313					165	45	4	0	0	0	0.79476	1	4136	4136		12.433	0.50046	1	5214800			17218	5946	11646	11655	19928	19928					0.16446217627867554
IKREKQEEPS	10	Unmodified	_IKREKQEEPS_					0	0	0			REV__ENSG00000115524|ENST00000335508|SF3B1	REV__ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3367309570312	2	622.335684	1242.65681	-0.27733	-0.0001726	1.3013	0.00080982	1.0239	0.00063722	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.86207	1	12090	12090		13.454	0	1	419280	+		17219	18126	11647	11656	19929	19929					0.04519265729572908
IKRGLSVDSA	10	Unmodified	_IKRGLSVDSA_					0	0	0		nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3035888671875	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.86218	1	10465	10465		32.812	1.2826	1	11944000			17220	8045	11648	11657	19930	19930					0.07224530363282611
IKRKQSPLVIS	11	Unmodified	_IKRKQSPLVIS_					0	0	0			REV__ENST00000217173.6_1_20:3102175-3102238:-|nuORF	REV__ENST00000217173.6_1_20:3102175-3102238:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3758544921875	2	634.906079	1267.79761	0.93426	0.00059317	2.1517	0.0013661	3.0859	0.0019593	635.409731989425	111.89	0.33094	111.96	111.76	112.09	0.069542					12	9	2	0	0	0	0.17643	1	12049	12049		9.1829	0	1	211490	+		17221	22728	11649	11658	19931	19931					0.17441889173642267
IKRLKKEKPE	10	Unmodified	_IKRLKKEKPE_					0	0	0		nc|ENSG00000153015|Q6UX04-2|CWC27;ENSG00000153015|ENST00000381070|CWC27	nc|ENSG00000153015|Q6UX04-2|CWC27	nc|ENSG00000153015|Q6UX04-2|CWC27	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3746337890625	2	634.906079	1267.79761	1.4989	0.00095163	1.4312	0.00090866	2.93	0.0018603	634.9068254388031	109.93	0.71732	110.06	109.7	110.42	0.1229					54	28	3	0	0	0	0.37624	1	11865	11865		5.5578	0	1	2410200			17222	5209	11650	11659	19932	19932					0.17441889173665004
IKRLKMVVKT	10	Unmodified	_IKRLKMVVKT_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	608.3049926757812	2	608.402118	1214.78968	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.603	1	50.652	50.152	51.152	0.049896								0	0	0	0.45132	1	3988	3988		25.574	12.762	1				17223	3199	11651	11660	19933	19933					0.19088038652512296
IKRMARFKWRR	11	Unmodified	_IKRMARFKWRR_					0	0	0			REV__ENST00000530606.1_1_10:77055306-77055468:+|nuORF	REV__ENST00000530606.1_1_10:77055306-77055468:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3096923828125	3	516.645384	1546.91432	0.81871	0.00042298	-1.5578	-0.00080484	-0.73912	-0.00038186	516.6436345653503	104.42	1.3439	104.54	103.9	105.24	0.11685					55	32	2	0	0	0	0.18331	1	11012	11012		1.2319	0	1	173020	+		17224	28285	11652	11661	19934	19934					0.16274348912384085
IKRMARFKWRR	11	Unmodified	_IKRMARFKWRR_					0	0	0			REV__ENST00000530606.1_1_10:77055306-77055468:+|nuORF	REV__ENST00000530606.1_1_10:77055306-77055468:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3135986328125	3	516.645384	1546.91432	-1.5608	-0.00080639	-0.46842	-0.00024201	-2.0292	-0.0010484	516.645167458817	103.39	0.15141	103.51	103.42	103.57	0.11494					5	3	2	0	0	0	0.18331	1	10868	10868		5.6988	0	1	82282	+		17225	28285	11652	11661	19935	19935					0.16274348912384085
IKRMRKRKSLR	11	Unmodified	_IKRMRKRKSLR_					0	0	0		ENSG00000139865|ENST00000553443|TTC6;ENST00000533625.5_1_14:38165939-38343677:+|nuORF	ENSG00000139865|ENST00000553443|TTC6	ENSG00000139865|ENST00000553443|TTC6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.2991027832031	3	491.320789	1470.94054	-0.62682	-0.00030797	-2.8822	-0.0014161	-3.509	-0.001724	491.3198036840717	107.84	0.21313	107.98	107.81	108.03	0.13866					6	5	2	0	0	0	0.1825	1	11594	11594		10.562	0.91575	1	1998500			17226	4401	11653	11662	19936	19936					0.22390618083886693
IKRNLQAG	8	Unmodified	_IKRNLQAG_					0	0	0			REV__L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|78|3|sense	REV__L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|78|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2738952636719	2	450.274701	898.534849	1.3503	0.000608	-1.2216	-0.00055004	0.12873	5.7964E-05	450.2740515365266	114.53	1.1707	114.54	114.21	115.38	0.0094528					72	56	2	0	0	0	0.88915	1	13839	13839		35.201	0	1	81332	+		17227	29473	11654	11663	19937	19937					0.08152313228504227
IKRRILPK	8	Unmodified	_IKRRILPK_					0	0	0		chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.3613891601562	2	512.361111	1022.70767	-0.36988	-0.00018951	0.50559	0.00025904	0.13571	6.9531E-05	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.84341	1	7158	7158		24.203	0	1	304520			17228	333	11655	11664	19938	19938					0.19722304355730103
IKRRVTLLVH	10	Unmodified	_IKRRVTLLVH_					0	0	0			REV__nc|ENSG00000081026|Q5TCQ9-3|MAGI3	REV__nc|ENSG00000081026|Q5TCQ9-3|MAGI3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76654052734375	3	412.275063	1233.80336	-0.81819	-0.00033732	-3.926	-0.0016186	-4.7442	-0.0019559	412.2732635342572	47.923	1.3089	47.896	47.703	49.012	-0.02634					63	32	3	0	0	0	0.37624	1	4153	4153		11.636	8.0169	1	300380	+		17229	16815	11656	11665	19939	19939					0.19581032475980464
IKRRVTLLVH	10	Unmodified	_IKRRVTLLVH_					0	0	0			REV__nc|ENSG00000081026|Q5TCQ9-3|MAGI3	REV__nc|ENSG00000081026|Q5TCQ9-3|MAGI3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76654052734375	3	412.275063	1233.80336	-0.79585	-0.00032811	-3.5144	-0.0014489	-4.3103	-0.001777	412.2735477327128	49.263	1.0162	49.239	48.794	49.811	-0.024033					50	22	3	0	0	0	0.37624	1	4153	4153		11.636	8.0169	1	102710	+		17230	16815	11656	11665	19940	19940					0.19581032475980464
IKRTISSK	8	Unmodified	_IKRTISSK_					0	0	0			REV__ENST00000369303.8_1_6:93979350-93982056:-|nuORF	REV__ENST00000369303.8_1_6:93979350-93982056:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.79730224609375	2	466.798009	931.581465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.108	1	19.478	18.978	19.978	-0.6296								0	0	0	0.29823	1	608	608		23.523	1.5628	1		+		17231	25618	11657	11666	19941	19941					0.11293753059794653
IKRVMGKP	8	Unmodified	_IKRVMGKP_					0	0	0			REV__ENST00000549933.5_1_12:69979244-69980637:+|nuORF	REV__ENST00000549933.5_1_12:69979244-69980637:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7908935546875	2	464.791672	927.568792	-1.9025	-0.00088428	-0.12016	-5.5851E-05	-2.0227	-0.00094014	464.7914872059108	34.459	1.5924	34.459	34.009	35.601	0					104	42	3	0	0	0	0.79929	1	1891	1891		18.324	0.95945	1	277220	+		17232	28588	11658	11667	19942	19942					0.10211018395921201
IKRVMGKP	8	Unmodified	_IKRVMGKP_					0	0	0			REV__ENST00000549933.5_1_12:69979244-69980637:+|nuORF	REV__ENST00000549933.5_1_12:69979244-69980637:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7913818359375	2	464.791672	927.568792	0.090364	4.2E-05	-2.3323	-0.001084	-2.2419	-0.001042	464.7905453409174	36.857	1.3586	36.797	35.976	37.335	-0.060333					62	38	2	0	0	0	0.89962	1	2023	2023		38.806	10.552	1	232790	+		17233	28588	11658	11667	19943	19943					0.10211018395921201
IKRWGKIKLRH	11	Unmodified	_IKRWGKIKLRH_					0	0	0			REV__nc|ENSG999|O00370|L1_ORF2	REV__nc|ENSG999|O00370|L1_ORF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3074035644531	3	478.977129	1433.90956	-1.4024	-0.00067171	-4.2835	-0.0020517	-5.6859	-0.0027234	479.3093824668273	46.595	1.8758	46.59	45.62	47.496	-0.0041618					104	46	3	0	0	0	0.79476	1	3755	3755		12.433	2.7867	1	224330	+		17234	30321	11659	11668	19944	19944					0.20995788041295782
IKRWGKIKLRH	11	Unmodified	_IKRWGKIKLRH_					0	0	0			REV__nc|ENSG999|O00370|L1_ORF2	REV__nc|ENSG999|O00370|L1_ORF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.30712890625	3	478.977129	1433.90956	-0.89818	-0.00043021	-4.2455	-0.0020335	-5.1436	-0.0024637	478.9750533889841	51.817	1.8474	51.852	50.982	52.829	0.034588					134	56	3	0	0	0	0.80593	1	4251	4251		10.104	0.8921	1	276750	+		17235	30321	11659	11668	19945	19945					0.20995788041295782
IKRWGKIKLRH	11	Unmodified	_IKRWGKIKLRH_					0	0	0			REV__nc|ENSG999|O00370|L1_ORF2	REV__nc|ENSG999|O00370|L1_ORF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.78216552734375	3	478.977129	1433.90956	-2.606	-0.0012482	-3.9437	-0.0018889	-6.5497	-0.0031371	478.97517812047835	42.567	1.8165	43.264	42.571	44.387	0.69754					140	44	5	0	0	0	0.17729	1	3829	3829		17.833	4.8757	1	1960100	+		17236	30321	11659	11668	19946	19946					0.20995788041295782
IKSCRWRHFRP	11	Unmodified	_IKSCRWRHFRP_					0	0	0		nc|ENSG00000120616|Q9H2F5-3|EPC1;ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1;ENST00000495790.1_1_10:32573515-32573971:-|nuORF	nc|ENSG00000120616|Q9H2F5-3|EPC1	nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.9397888183594	3	495.938457	1484.79354	-1.6186	-0.00080275	4.2709	0.0021181	2.6522	0.0013153	495.94042028285827	42.728	0.5214	42.728	42.57	43.091	0					27	12	3	0	0	0	0.69687	1	2994	2994		32.034	8.6562	1	96341			17237	3138	11660	11669	19947	19947					0.07053521198918133
IKSCRWRHFRP	11	Unmodified	_IKSCRWRHFRP_					0	0	0		nc|ENSG00000120616|Q9H2F5-3|EPC1;ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1;ENST00000495790.1_1_10:32573515-32573971:-|nuORF	nc|ENSG00000120616|Q9H2F5-3|EPC1	nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	495.938457	1484.79354	0.31439	0.00015592	1.9708	0.00097739	2.2852	0.0011333	495.9395239842175	42.951	0.4278	42.921	42.713	43.141	-0.029461	0.059259	-0.0022245	NaN	32.034	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86549			17238	3138	11660	11669							0.07053521198918133
IKSCRWRHFRP	11	Unmodified	_IKSCRWRHFRP_					0	0	0		nc|ENSG00000120616|Q9H2F5-3|EPC1;ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1;ENST00000495790.1_1_10:32573515-32573971:-|nuORF	nc|ENSG00000120616|Q9H2F5-3|EPC1	nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	495.938457	1484.79354	-1.0328	-0.00051222	4.0193	0.0019933	2.9865	0.0014811	496.2748259521043	42.866	0.50645	42.83	42.595	43.102	-0.03582	-0.03145	0.00082336	NaN	32.034	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66577			17239	3138	11660	11669							0.07053521198918133
IKSCRWRHFRP	11	Unmodified	_IKSCRWRHFRP_					0	0	0		nc|ENSG00000120616|Q9H2F5-3|EPC1;ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1;ENST00000495790.1_1_10:32573515-32573971:-|nuORF	nc|ENSG00000120616|Q9H2F5-3|EPC1	nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	495.938457	1484.79354	-2.1972	-0.0010897	4.2292	0.0020974	2.032	0.0010077	495.94045717933983	42.872	0.58614	42.872	42.612	43.198	0.00016785	0.010362	0.0011356	NaN	32.034	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85726			17240	3138	11660	11669							0.07053521198918133
IKSCRWRHFRP	11	Unmodified	_IKSCRWRHFRP_					0	0	0		nc|ENSG00000120616|Q9H2F5-3|EPC1;ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1;ENST00000495790.1_1_10:32573515-32573971:-|nuORF	nc|ENSG00000120616|Q9H2F5-3|EPC1	nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	495.938457	1484.79354	0.27607	0.00013691	2.9228	0.0014495	3.1989	0.0015864	496.2741421395191	42.806	0.51134	42.871	42.681	43.192	0.065033	0.009134	-0.00080806	NaN	32.034	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122370			17241	3138	11660	11669							0.07053521198918133
IKSCRWRHFRP	11	Unmodified	_IKSCRWRHFRP_					0	0	0		nc|ENSG00000120616|Q9H2F5-3|EPC1;ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1;ENST00000495790.1_1_10:32573515-32573971:-|nuORF	nc|ENSG00000120616|Q9H2F5-3|EPC1	nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	495.938457	1484.79354	-0.022425	-1.1122E-05	2.048	0.0010157	2.0256	0.0010046	495.93907574402317	42.871	0.44595	42.821	42.572	43.018	-0.050308	-0.041009	-0.0021095	NaN	32.034	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111150			17242	3138	11660	11669							0.07053521198918133
IKSDVPGTQ	9	Unmodified	_IKSDVPGTQ_					0	0	0		nc|ENSG00000105379|P38117-2|ETFB	nc|ENSG00000105379|P38117-2|ETFB	nc|ENSG00000105379|P38117-2|ETFB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.9577331542969	2	472.756007	943.497461	0.38268	0.00018092	-0.67699	-0.00032005	-0.29431	-0.00013914	472.7556940606342	34.186	1.0502	34.491	34.2	35.25	0.30495					34	25	3	0	0	0	0.20789	1	2527	2527		44.377	17.581	1	413080			17243	14830	11661	11670	19948	19948					0.023451771722420744
IKSESIFTE	9	Unmodified	_IKSESIFTE_					0	0	0			REV__ENSG00000050030|ENST00000055682|NEXMIF	REV__ENSG00000050030|ENST00000055682|NEXMIF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.2911987304688	2	527.276772	1052.53899	0.66288	0.00034952	-0.23416	-0.00012347	0.42872	0.00022605	527.778957165091	53.31	0.16342	53.724	53.622	53.786	0.4139					5	3	2	0	0	0	0.20789	1	5378	5378		26.693	0	1	42268	+		17244	16374	11662	11671	19949	19949					0.014823131409229973
IKSLALPP	8	Unmodified	_IKSLALPP_					0	0	0		ENST00000476381.5_1_X:15447791-15497935:-|nuORF	ENST00000476381.5_1_X:15447791-15497935:-|nuORF	ENST00000476381.5_1_X:15447791-15497935:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7749938964844	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.87479	1	2867	2867		30.504	0	1	10440000			17245	12336	11663	11672	19950	19950					0.10712464770847419
IKSPKYGF	8	Unmodified	_IKSPKYGF_					0	0	0			REV__nc|ENSG00000140025|Q9BUY7-6|EFCAB11	REV__nc|ENSG00000140025|Q9BUY7-6|EFCAB11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.2684020996094	2	470.268553	938.522553	-0.59682	-0.00028066	0.69957	0.00032898	0.10275	4.8321E-05	470.2687452652717	73.919	2.2099	74.478	73.965	76.174	0.55891					143	55	4	0	0	0	0.91977	1	8410	8410		45.952	1.4209	1	1996400	+		17246	19593	11664	11673	19951	19951					0.05083276765469691
IKSRTTEII	9	Unmodified	_IKSRTTEII_					0	0	0			REV__nc|ENSG00000183914|Q9P225-2|DNAH2	REV__nc|ENSG00000183914|Q9P225-2|DNAH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8211669921875	2	530.821681	1059.62881	0.37543	0.00019929	-1.3756	-0.00073019	-1.0002	-0.0005309	530.8207758612427	79.518	0.93618	79.934	79.317	80.253	0.41621					53	21	3	0	0	0	0.78528	1	9069	9069		29.17	0.020503	1	1028200	+		17247	22634	11665	11674	19952	19952					0.10137987540110771
IKSTKGKRSG	10	Unmodified	_IKSTKGKRSG_					0	0	0			REV__ENST00000520812.1_1_8:59416497-59416623:+|nuORF	REV__ENST00000520812.1_1_8:59416497-59416623:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3277587890625	2	531.324922	1060.63529	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.74	1	107.86	107.36	108.36	0.11715								0	0	0	0.45132	1	13176	13176		25.126	0.92324	1		+		17248	28109	11666	11675	19953	19953					0.10739925491520808
IKSVGDVP	8	Unmodified	_IKSVGDVP_					0	0	0			REV__nc|ENSG00000069188|Q58EX2-2|SDK2	REV__nc|ENSG00000069188|Q58EX2-2|SDK2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7852478027344	2	407.737086	813.459619	-0.34446	-0.00014045	1.5105	0.00061588	1.166	0.00047544	407.7375392964327	29.349	0.73661	29.306	28.853	29.589	-0.043093					39	28	2	0	0	0	0.4196	1	1557	1557		30.504	0	1	22084	+		17249	16576	11667	11676	19954	19954					0.04542710977432307
IKSVPTLLSFL	11	Unmodified	_IKSVPTLLSFL_					0	0	0			REV__ENSG00000073910|ENST00000542859|FRY	REV__ENSG00000073910|ENST00000542859|FRY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.5875244140625	3	406.588313	1216.74311	-0.37107	-0.00015087	-1.2273	-0.00049901	-1.5984	-0.00064988	406.58772324462274	24.588	2.4069	24.542	24.117	26.524	-0.04598					132	57	4	0	0	0	0.74405	1	1029	1029		23.378	2.5408	1	381610	+		17250	16683	11668	11677	19955	19955					0.14340877302220179
IKTEPSLHE	9	Unmodified	_IKTEPSLHE_					0	0	0		ENSG00000176895|ENST00000641490|OR51A7;ENSG00000205497|ENST00000641898|OR51A4	ENSG00000176895|ENST00000641490|OR51A7	ENSG00000176895|ENST00000641490|OR51A7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.361328125	2	527.282389	1052.55022	0.28746	0.00015157	-3.6257	-0.0019118	-3.3383	-0.0017602	527.2802514643502	37.033	0.18276	36.973	36.855	37.038	-0.060337					6	4	2	0	0	0	0.20789	1	2078	2078		23.042	8.1776	1	54931			17251	7102	11669	11678	19956	19956					0.026051352350577872
IKTKHSKEMP	10	Unmodified	_IKTKHSKEMP_					0	0	0		nc|ENSG00000067646|P08048-2|ZFY;nc|ENSG00000067646|P08048-3|ZFY;ENSG00000067646|ENST00000155093|ZFY	nc|ENSG00000067646|P08048-2|ZFY	nc|ENSG00000067646|P08048-2|ZFY	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.2254638671875	3	400.225269	1197.65398	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.884	1	16.802	16.302	17.302	-0.0821								0	0	0	0.45132	1	184	184		22.58	0.89391	1				17252	1186	11670	11679	19957	19957					0.06305719071065141
IKTKRVETT	9	Unmodified	_IKTKRVETT_					0	0	0			REV__nc|ENSG00000033178|A0AVT1-2|UBA6	REV__nc|ENSG00000033178|A0AVT1-2|UBA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3267822265625	2	538.327131	1074.63971	-0.15457	-8.3211E-05	0.45031	0.00024241	0.29574	0.0001592	538.3272743681667	105.93	1.9444	105.91	105.06	107	-0.025146					87	45	3	0	0	0	0.7932	1	11617	11617		19.997	1.7347	1	893020	+		17253	16282	11671	11680	19958	19958					0.10537389914406958
IKTKRVETT	9	Unmodified	_IKTKRVETT_					0	0	0			REV__nc|ENSG00000033178|A0AVT1-2|UBA6	REV__nc|ENSG00000033178|A0AVT1-2|UBA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3270263671875	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.78124	2	12559	12559;12877		30.318	1.8262	1	4041000	+		17254	16282	11671	11680	19959;19960	19959					0.10537389914406958
IKTLLLNFN	9	Unmodified	_IKTLLLNFN_					0	0	0		ENSG00000068784|ENST00000263736|SRBD1;nc|ENSG00000068784|Q8N5C6-2|SRBD1;ENST00000475073.5_1_2:45647031-45774722:-|nuORF	ENSG00000068784|ENST00000263736|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.32763671875	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12154	12154		23.042	1.0826	1	4041000			17255	1207	11672	11681	19961	19961					0.10939479408125408
IKTSKSSP	8	Unmodified	_IKTSKSSP_					0	0	0			REV__ENSG00000230667|ENST00000596516|SETSIP	REV__ENSG00000230667|ENST00000596516|SETSIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.25018310546875	2	424.247818	846.481082	2.8565	0.0012119	2.3047	0.00097775	5.1612	0.0021896	424.2488058967198	107.13	1.0598	107.16	106.76	107.82	0.035614					82	24	5	0	0	0	0.87922	1	11777	11777		31.955	0.37597	1	4411900	+		17256	23757	11673	11682	19962	19962					0.05170096006145286
IKTVMVRNLVL	11	Unmodified	_IKTVMVRNLVL_					0	0	0			REV__ENST00000535787.5_1_2:148602260-148654031:+|nuORF	REV__ENST00000535787.5_1_2:148602260-148654031:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4058837890625	2	643.404858	1284.79516	2.6785	0.0017233	-1.0241	-0.00065892	1.6544	0.0010644	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.69995	1	11654	11654		31.53	1.2121	1	14704000	+		17257	24228	11674	11683	19963	19963					0.16415717444328948
IKTYLSLYLDL	11	Unmodified	_IKTYLSLYLDL_					0	0	0			REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|84|3|sense	REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|84|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.73858642578125	3	447.926995	1340.75915	1.4086	0.00063095	3.556	0.0015928	4.9646	0.0022238	448.26246556846735	27.522	0.77542	27.267	26.945	27.72	-0.25465					27	17	2	0	0	0	0.17334	1	1658	1658		27.644	6.6117	1	63649	+		17258	29513	11675	11684	19964	19964					0.10240538748462313
IKVEPVAL	8	Unmodified	_IKVEPVAL_					0	0	0		ENSG00000165632|ENST00000344293|TAF3	ENSG00000165632|ENST00000344293|TAF3	ENSG00000165632|ENST00000344293|TAF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.78021240234375	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.93529	1	2527	2527		52.299	5.5327	1	8013100			17259	6103	11676	11685	19965	19965					0.10388447425270897
IKVLMINGLLG	11	Unmodified	_IKVLMINGLLG_					0	0	0			REV__ENSG00000135577|ENST00000258042|NMBR	REV__ENSG00000135577|ENST00000258042|NMBR	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.8666381835938	2	585.867577	1169.7206	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.705	1	24.191	23.691	24.691	-0.51365								0	0	0	0.56276	1	1221	1221		19.104	1.6355	1		+		17260	19235	11677	11686	19966	19966					0.1425295463295697
IKVMGFLKVF	10	Unmodified	_IKVMGFLKVF_					0	0	0			REV__nc|ENSG00000164749|Q14541|HNF4G	REV__nc|ENSG00000164749|Q14541|HNF4G	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	591.3555297851562	2	591.359388	1180.70422	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.46	1	108.42	107.92	108.92	-0.042404								0	0	0	0.45132	1	11822	11822		44.117	20.594	1		+		17261	21111	11678	11687	19967	19967					0.1210987346685215
IKVRLIGP	8	Unmodified	_IKVRLIGP_					0	0	0			REV__ENST00000520560.5_1_8:94749563-94753176:-|nuORF	REV__ENST00000520560.5_1_8:94749563-94753176:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.3084716796875	2	448.308013	894.601472	-0.81848	-0.00036693	0.83217	0.00037307	0.013688	6.1366E-06	448.30828378299327	79.858	1.6959	80.274	79.317	81.013	0.41621					76	39	2	0	0	0	0.884	1	9174	9174		33.516	5.2613	1	808240	+		17262	28104	11679	11688	19968	19968					0.1499554879040943
IKVVGSYT	8	Unmodified	_IKVVGSYT_					0	0	0			REV__ENSG00000180815|ENST00000338883|MAP3K15	REV__ENSG00000180815|ENST00000338883|MAP3K15	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.93408203125	2	433.752736	865.490919	-1.5931	-0.000691	-1.1001	-0.00047718	-2.6932	-0.0011682	433.752026554315	77.484	1.4391	77.609	77.375	78.814	0.12485					76	51	2	0	0	0	0.4196	1	7291	7291		18.324	11.589	1	37958	+		17263	22418	11680	11689	19969	19969					0.052792840115330364
IKVVGSYT	8	Unmodified	_IKVVGSYT_					0	0	0			REV__ENSG00000180815|ENST00000338883|MAP3K15	REV__ENSG00000180815|ENST00000338883|MAP3K15	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	433.752736	865.490919	-1.3339	-0.00057859	-0.55374	-0.00024019	-1.8877	-0.00081878	433.75249130286676	77.594	0.056023	77.594	77.559	77.615	0	0.065366	0.0019094	NaN	18.324	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35083	+		17264	22418	11680	11689							0.052792840115330364
IKVVGSYT	8	Unmodified	_IKVVGSYT_					0	0	0			REV__ENSG00000180815|ENST00000338883|MAP3K15	REV__ENSG00000180815|ENST00000338883|MAP3K15	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	433.752736	865.490919	-0.09018	-3.9116E-05	-2.7409	-0.0011889	-2.8311	-0.001228	433.75134853143936	77.511	1.5405	77.46	77.177	78.717	-0.050789	-0.068999	1.1994E-05	NaN	18.324	69	56	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56275	+		17265	22418	11680	11689							0.052792840115330364
IKVVGSYT	8	Unmodified	_IKVVGSYT_					0	0	0			REV__ENSG00000180815|ENST00000338883|MAP3K15	REV__ENSG00000180815|ENST00000338883|MAP3K15	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	433.752736	865.490919	1.5733	0.00068243	-4.4931	-0.0019489	-2.9198	-0.0012665	433.75042894742666	77.601	0.78627	77.65	77.32	78.106	0.04969	0.12144	-0.0015081	NaN	18.324	49	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37846	+		17266	22418	11680	11689							0.052792840115330364
IKVVGSYT	8	Unmodified	_IKVVGSYT_					0	0	0			REV__ENSG00000180815|ENST00000338883|MAP3K15	REV__ENSG00000180815|ENST00000338883|MAP3K15	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	433.752736	865.490919	0.52395	0.00022726	-3.1877	-0.0013827	-2.6637	-0.0011554	433.75126480626426	77.197	0.60881	77.332	77.198	77.806	0.13478	-0.19745	-0.00037557	NaN	18.324	39	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59738	+		17267	22418	11680	11689							0.052792840115330364
IKWKAGPN	8	Unmodified	_IKWKAGPN_					0	0	0			REV__ENSG00000163689|ENST00000482387|CFAP20DC	REV__ENSG00000163689|ENST00000482387|CFAP20DC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2637939453125	2	457.266345	912.518136	-0.13058	-5.9708E-05	-3.8267	-0.0017498	-3.9573	-0.0018095	457.26443630735923	95.336	1.6028	95.404	94.882	96.485	0.068336					92	37	4	0	0	0	0.884	1	9985	9985		33.516	0.022601	1	838550	+		17268	20958	11681	11690	19970	19970					0.05837812342554116
IKWRTKHA	8	Unmodified	_IKWRTKHA_					0	0	0		ENSG00000171735|ENST00000303635|CAMTA1;nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1	ENSG00000171735|ENST00000303635|CAMTA1	ENSG00000171735|ENST00000303635|CAMTA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	520.24755859375	2	520.311618	1038.60868	0.36299	0.00018887	-2.5671	-0.0013357	-2.2041	-0.0011468	520.3103845257509	49.786	0.77914	49.828	49.519	50.298	0.042236					24	18	2	0	0	0	0.4196	1	3848	3848		19.36	0	1	51708			17269	6703	11682	11691	19971	19971					0.09092281390826429
ILAALFASAI	10	Unmodified	_ILAALFASAI_					0	0	0		ENSG00000105650|ENST00000262805|PDE4C;nc|ENSG00000285188|Q08493-2|PDE4C;nc|ENSG00000285188|Q08493|PDE4C	ENSG00000105650|ENST00000262805|PDE4C	ENSG00000105650|ENST00000262805|PDE4C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.3044738769531	2	495.305136	988.595718	-0.086106	-4.2649E-05	0.23222	0.00011502	0.14611	7.2369E-05	495.3050753476904	64.584	1.0101	65.138	64.685	65.695	0.55386					41	24	2	0	0	0	0.50394	1	6994	6994		55.504	0	1	313980			17270	2233	11683	11692	19972	19972					0.10096405488070559
ILAAQLRTAGT	11	Unmodified	_ILAAQLRTAGT_					0	0	0		ENST00000325327.3_1_19:2430242-2430563:-|nuORF	ENST00000325327.3_1_19:2430242-2430563:-|nuORF	ENST00000325327.3_1_19:2430242-2430563:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.8301391601562	2	557.83258	1113.65061	-0.9931	-0.00055398	-2.1796	-0.0012158	-3.1727	-0.0017698	557.83140422783	101.17	1.502	101.2	100.79	102.29	0.031036					74	35	3	0	0	0	0.732	2	10787	10775;10787		26.063	6.0547	1	902020			17271	10070	11684	11693	19973;19974	19974					0.09832792288693781
ILAAVRPKE	9	Unmodified	_ILAAVRPKE_					0	0	0			REV__nc|ENSG00000135048|Q9UHN6-2|CEMIP2	REV__nc|ENSG00000135048|Q9UHN6-2|CEMIP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7471618652344	2	498.813659	995.612765	-0.062945	-3.1398E-05	-1.2524	-0.00062474	-1.3154	-0.00065614	498.81290524461184	74.745	0.37569	75.31	75.208	75.584	0.56458					12	8	2	0	0	0	0.20789	1	8488	8488		16.473	0.83134	1	98400	+		17272	19184	11685	11694	19975	19975					0.11478326093902069
ILACGVAKV	9	Unmodified	_ILACGVAKV_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2655944824219	2	437.264956	872.515359	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.934	1	28.956	28.456	29.456	0.021948								0	0	0	0.32159	1	1203	1203		23.042	6.5693	1				17273	8948	11686	11695	19976	19976					0.07400220893396181
ILADIQSHMD	10	Unmodified	_ILADIQSHMD_					0	0	0		ENST00000532066.1_1_11:35745832-35827932:+|nuORF;ENSG00000166326|ENST00000299413|TRIM44	ENST00000532066.1_1_11:35745832-35827932:+|nuORF	ENST00000532066.1_1_11:35745832-35827932:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.2706298828125	2	571.779156	1141.54376	-0.23304	-0.00013325	-3.4068	-0.0019479	-3.6398	-0.0020812	571.7774452984646	55.887	0.483	55.86	55.626	56.109	-0.027279					19	13	2	0	0	0	0.37624	1	5123	5123		20.947	0	1	58355			17274	6178	11687	11696	19977	19977					-0.02135125987979336
ILADLLPSLA	10	Unmodified	_ILADLLPSLA_					0	0	0		ENSG00000109016|ENST00000395511|DHRS7B	ENSG00000109016|ENST00000395511|DHRS7B	ENSG00000109016|ENST00000395511|DHRS7B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3182373046875	2	513.3157	1024.61685	-0.40505	-0.00020792	2.0459	0.0010502	1.6408	0.00084226	513.3166290585863	43.201	1.1169	43.206	42.933	44.05	0.0057487					65	27	3	0	0	0	0.86201	1	3021	3021		24.203	0	1	350060			17275	2444	11688	11697	19978	19978					0.10552370796972355
ILAEILSRLEP	11	Unmodified	_ILAEILSRLEP_					0	0	0		ENSG00000278685|ENST00000615129|IQCA1L	ENSG00000278685|ENST00000615129|IQCA1L	ENSG00000278685|ENST00000615129|IQCA1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8876953125	2	627.37682	1252.73909	6.5832	0.0041301	2.6289	0.0016493	9.2121	0.0057794	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.7434	1	13817	13817		23.523	3.5259	1	94412			17276	9034	11689	11698	19979	19979					0.12282787808499052
ILAEVIGVL	9	Unmodified	_ILAEVIGVL_					0	0	0		ENSG00000142408|ENST00000270458|CACNG8	ENSG00000142408|ENST00000270458|CACNG8	ENSG00000142408|ENST00000270458|CACNG8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8005065917969	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	1	3617	3617		25.45	1.2474	1	1294000			17277	4562	11690	11699	19980	19980					0.11905003113804469
ILAEVIGVL	9	Unmodified	_ILAEVIGVL_					0	0	0		ENSG00000142408|ENST00000270458|CACNG8	ENSG00000142408|ENST00000270458|CACNG8	ENSG00000142408|ENST00000270458|CACNG8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8003234863281	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	2	3531	3318;3531		21.96	3.6355	1	1516700			17278	4562	11690	11699	19981;19982	19982					0.11905003113804469
ILAFSWRIKN	10	Unmodified	_ILAFSWRIKN_					0	0	0			REV__chrX:119788528-119789908|16|10.94|0.11|6.61|-|1|None,RPL39|1	REV__chrX:119788528-119789908|16|10.94|0.11|6.61|-|1|None,RPL39|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	624.3757934570312	2	624.36659	1246.71863	1.3431	0.00083859	4.1847	0.0026128	5.5278	0.0034514	624.8711050606543	103.41	0.71538	103.6	103.39	104.11	0.18297					24	17	2	0	0	0	0.8651	1	10948	10948		25.574	1.0549	1	322160	+		17279	15945	11691	11700	19983	19983					0.10513661939353369
ILAGISVLP	9	Unmodified	_ILAGISVLP_					0	0	0			REV__nc|ENSG00000118514|Q9H2A2-4|ALDH8A1	REV__nc|ENSG00000118514|Q9H2A2-4|ALDH8A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7881164550781	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.76996	1	3067	3067		33.516	3.674	1	54520000	+		17280	18318	11692	11701	19984	19984					0.11308733942325944
ILAIALRLRQS	11	Unmodified	_ILAIALRLRQS_					0	0	0		ENSG00000254122|ENST00000398594|PCDHGB7;nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	ENSG00000254122|ENST00000398594|PCDHGB7	ENSG00000254122|ENST00000398594|PCDHGB7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.9413757324219	3	418.60659	1252.79794	-1.7442	-0.00073012	-2.6386	-0.0011045	-4.3828	-0.0018347	418.60537062211796	49.043	4.3192	49.043	47.911	52.23	0					175	108	3	0	0	0	0.74405	1	3857	3857		23.378	2.3457	1	101990			17281	8872	11693	11702	19985	19985					0.18165308893503607
ILAISPVLG	9	Unmodified	_ILAISPVLG_					0	0	0		nc|ENSG00000085563|P08183-2|ABCB1;ENSG00000085563|ENST00000622132|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7878723144531	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.7932	1	2922	2922		13.775	0	1	15753000			17282	1534	11694	11703	19986	19986					0.11308733942337312
ILAKNKRLA	9	Unmodified	_ILAKNKRLA_					0	0	0			REV__ENSG00000130158|ENST00000294618|DOCK6	REV__ENSG00000130158|ENST00000294618|DOCK6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8413696289062	2	513.842751	1025.67095	0.92898	0.00047735	-0.96955	-0.00049819	-0.040569	-2.0846E-05	513.842134150575	21.206	0.44043	21.274	21.065	21.506	0.068251					29	15	3	0	0	0	0.7932	1	544	544		18.324	0.95945	1	57532	+		17283	18850	11695	11704	19987	19987					0.15914007739161207
ILAKTKEFNA	10	Unmodified	_ILAKTKEFNA_					0	0	0			REV__nc|ENSG00000054282|Q86SQ7-3|SDCCAG8	REV__nc|ENSG00000054282|Q86SQ7-3|SDCCAG8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3265380859375	2	567.829506	1133.64446	1.5021	0.00085292	1.7227	0.00097821	3.2248	0.0018311	567.8305705345691	95.275	1.8187	95.322	94.963	96.782	0.046982					81	42	3	0	0	0	0.37624	1	10148	10148		9.7057	4.1478	1	454940	+		17284	16400	11696	11705	19988	19988					0.08298274057187882
ILALEEKIP	9	Unmodified	_ILALEEKIP_					0	0	0		nc|ENSG00000170899|O15217-2|GSTA4;ENSG00000170899|ENST00000370963|GSTA4	nc|ENSG00000170899|O15217-2|GSTA4	nc|ENSG00000170899|O15217-2|GSTA4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3170776367188	2	513.3157	1024.61685	-1.3651	-0.00070072	3.5186	0.0018062	2.1536	0.0011055	513.3175456130648	53.876	2.1608	53.876	52.509	54.67	0					97	64	3	0	0	0	0.7932	1	4494	4494		26.693	1.1189	1	276500			17285	6623	11697	11706	19989	19989					0.10552370796949617
ILALEEKIP	9	Unmodified	_ILALEEKIP_					0	0	0		nc|ENSG00000170899|O15217-2|GSTA4;ENSG00000170899|ENST00000370963|GSTA4	nc|ENSG00000170899|O15217-2|GSTA4	nc|ENSG00000170899|O15217-2|GSTA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3179931640625	2	513.3157	1024.61685	-0.38757	-0.00019894	2.4414	0.0012532	2.0539	0.0010543	513.3170376628356	53.655	1.47	53.703	53.107	54.577	0.047802					76	53	2	0	0	0	0.78058	1	4383	4383		30.504	5.0535	1	209860			17286	6623	11697	11706	19990	19990					0.10552370796949617
ILALGVRM	8	Unmodified	_ILALGVRM_					0	0	0			REV__ENSG00000157992|ENST00000288873|KRTCAP3	REV__ENSG00000157992|ENST00000288873|KRTCAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7739562988281	2	436.772948	871.531344	0.39754	0.00017364	0.64314	0.00028091	1.0407	0.00045454	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.82464	1	1205	1205		21.702	7.0382	1	81327	+		17287	20576	11698	11707	19991	19991					0.0904392713028983
ILALGVRM	8	Unmodified	_ILALGVRM_					0	0	0			REV__ENSG00000157992|ENST00000288873|KRTCAP3	REV__ENSG00000157992|ENST00000288873|KRTCAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.77398681640625	2	436.772948	871.531344	-0.34986	-0.00015281	1.4315	0.00062523	1.0816	0.00047242	436.77383375696394	27.418	1.1225	27.379	27.041	28.164	-0.038523					45	25	2	0	0	0	0.80706	1	1281	1281		19.36	1.995	1	85606	+		17288	20576	11698	11707	19992	19992					0.0904392713028983
ILALLSTFQQ	10	Unmodified	_ILALLSTFQQ_					0	0	0		ENST00000431536.1_1_1:78239597-78239909:-|nuORF	ENST00000431536.1_1_1:78239597-78239909:-|nuORF	ENST00000431536.1_1_1:78239597-78239909:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3301391601562	2	567.331882	1132.64921	-0.54401	-0.00030863	-2.6363	-0.0014957	-3.1803	-0.0018043	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.85438	1	8977	8977		16.473	0.83134	1	4477200			17289	11649	11699	11708	19993	19993					0.08819158199935373
ILALQEIL	8	Unmodified	_ILALQEIL_					0	0	0		L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|74|2|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|74|2|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|74|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7929382324219	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.82464	1	3728	3728		21.702	1.2205	1	652510			17290	14569	11700	11709	19994	19994					0.10984716596760791
ILALRRTNL	9	Unmodified	_ILALRRTNL_					0	0	0			REV__ENST00000556605.5_1_14:69928765-69928918:+|nuORF	REV__ENST00000556605.5_1_14:69928765-69928918:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2786254882812	2	535.345658	1068.67676	-1.3364	-0.00071542	-2.5255	-0.001352	-3.8619	-0.0020674	535.3445690532942	38.953	0.54945	39.507	39.153	39.702	0.55449					28	12	3	0	0	0	0.20789	1	3230	3230		42.396	9.5837	1	138380	+		17291	28702	11701	11710	19995	19995					0.14517106250832512
ILALSVTERR	10	Unmodified	_ILALSVTERR_					0	0	0			REV__ENST00000261584.8_2_16:23647337-23647469:-|nuORF	REV__ENST00000261584.8_2_16:23647337-23647469:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	579.3523559570312	2	579.35368	1156.69281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.82	1	108.84	108.34	109.34	0.020561								0	0	0	0.45132	1	11621	11621		29.15	3.5755	1		+		17292	24396	11702	11711	19996	19996					0.12072767697077325
ILALVPGSL	9	Unmodified	_ILALVPGSL_					0	0	0			REV__nc|ENSG00000133475|P36268-2|GGT2P	REV__nc|ENSG00000133475|P36268-2|GGT2P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7881164550781	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	1	2384	2384		19.36	0	1	11532000	+		17293	17128	11703	11712	19997	19997					0.11308733942325944
ILAPLPYG	8	Unmodified	_ILAPLPYG_					0	0	0			REV__ENSG00000180035|ENST00000613509|ZNF48	REV__ENSG00000180035|ENST00000613509|ZNF48	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.75128173828125	2	422.252372	842.49019	-0.18717	-7.9035E-05	1.3412	0.00056632	1.154	0.00048728	422.25292662705925	76.978	1.3602	77.031	75.769	77.13	0.052704					70	47	2	0	0	0	0.4196	1	7288	7288		33.493	16.788	1	213970	+		17294	22374	11704	11713	19998	19998					0.06264489362467884
ILAPLSKMA	9	Unmodified	_ILAPLSKMA_					0	0	0			REV__ENSG00000117697|ENST00000366977|NSL1	REV__ENSG00000117697|ENST00000366977|NSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2878723144531	2	472.285889	942.557224	-0.108	-5.1006E-05	3.8671	0.0018264	3.7591	0.0017754	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.69914	2	10374	10374;10459		40.573	9.995	1	46909000	+		17295	18277	11705	11714	19999;20000	19999					0.08364776581913702
ILAPLSKMA	9	Unmodified	_ILAPLSKMA_					0	0	0			REV__ENSG00000117697|ENST00000366977|NSL1	REV__ENSG00000117697|ENST00000366977|NSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2881164550781	2	472.285889	942.557224	2.0257	0.00095671	1.7357	0.00081974	3.7614	0.0017765	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.77546	1	10627	10627		31.955	5.1588	1	50843000	+		17296	18277	11705	11714	20001	20001					0.08364776581913702
ILAPLSKMA	9	Unmodified	_ILAPLSKMA_					0	0	0			REV__ENSG00000117697|ENST00000366977|NSL1	REV__ENSG00000117697|ENST00000366977|NSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2882080078125	2	472.285889	942.557224	2.4783	0.0011705	2.3873	0.0011275	4.8656	0.0022979	472.28709322712206	99.355	1.7964	99.301	98.824	100.62	-0.053734					80	41	2	0	0	0	0.76764	1	10771	10771		34.173	2.6427	1	447940	+		17297	18277	11705	11714	20002	20002					0.08364776581913702
ILAPLSKMA	9	Unmodified	_ILAPLSKMA_					0	0	0			REV__ENSG00000117697|ENST00000366977|NSL1	REV__ENSG00000117697|ENST00000366977|NSL1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2890625	2	472.285889	942.557224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.07	1	116.04	115.54	116.54	-0.02433								0	0	0	0.31828	1	12845	12845		24.203	2.5004	1		+		17298	18277	11705	11714	20003	20003					0.08364776581913702
ILAPLSKMA	9	Unmodified	_ILAPLSKMA_					0	0	0			REV__ENSG00000117697|ENST00000366977|NSL1	REV__ENSG00000117697|ENST00000366977|NSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2875061035156	2	472.285889	942.557224	-0.026744	-1.2631E-05	3.8174	0.0018029	3.7907	0.0017903	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.7932	1	10338	10338		24.203	2.2429	1	48574000	+		17299	18277	11705	11714	20004	20004					0.08364776581913702
ILAPLSKMA	9	Unmodified	_ILAPLSKMA_					0	0	0			REV__ENSG00000117697|ENST00000366977|NSL1	REV__ENSG00000117697|ENST00000366977|NSL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2875671386719	2	472.285889	942.557224	0.72641	0.00034307	3.0865	0.0014577	3.8129	0.0018008	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.78536	1	9865	9865		29.15	2.3535	1	48696000	+		17300	18277	11705	11714	20005	20005					0.08364776581913702
ILAPLSKMA	9	Unmodified	_ILAPLSKMA_					0	0	0			REV__ENSG00000117697|ENST00000366977|NSL1	REV__ENSG00000117697|ENST00000366977|NSL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2893981933594	2	472.285889	942.557224	2.1484	0.0010146	2.0198	0.00095391	4.1681	0.0019686	472.28673091824714	113.99	1.2395	114.01	113.14	114.38	0.020027					83	56	2	0	0	0	0.78058	2	13775	13755;13775		30.504	8.8013	1	98727	+		17301	18277	11705	11714	20006;20007	20007					0.08364776581913702
ILAPLSKMA	9	Unmodified	_ILAPLSKMA_					0	0	0			REV__ENSG00000117697|ENST00000366977|NSL1	REV__ENSG00000117697|ENST00000366977|NSL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.28955078125	2	472.285889	942.557224	2.1469	0.001014	2.0105	0.00094952	4.1574	0.0019635	472.2867264071782	114.66	1.2655	114.67	114.37	115.64	0.0094528					102	61	2	0	0	0	0.78536	1	13818	13818		29.15	3.5755	1	83672	+		17302	18277	11705	11714	20008	20008					0.08364776581913702
ILAPWKKGLIA	11	Unmodified	_ILAPWKKGLIA_					0	0	0		nc|ENSG00000261371|P16284-5|PECAM1;nc|ENSG00000261371|P16284-3|PECAM1;nc|ENSG00000261371|P16284-4|PECAM1;nc|ENSG00000261371|P16284-2|PECAM1;nc|ENSG00000261371|P16284-6|PECAM1;ENSG00000261371|ENST00000563924|PECAM1	nc|ENSG00000261371|P16284-5|PECAM1	nc|ENSG00000261371|P16284-5|PECAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9297180175781	3	403.928781	1208.76451	-0.86	-0.00034738	2.9867	0.0012064	2.1267	0.00085905	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.76892	2	3931	3931;4013		17.833	5.9008	1	2612300			17303	8925	11706	11715	20009;20010	20009					0.1684830712160874
ILAPWKKGLIA	11	Unmodified	_ILAPWKKGLIA_					0	0	0		nc|ENSG00000261371|P16284-5|PECAM1;nc|ENSG00000261371|P16284-3|PECAM1;nc|ENSG00000261371|P16284-4|PECAM1;nc|ENSG00000261371|P16284-2|PECAM1;nc|ENSG00000261371|P16284-6|PECAM1;ENSG00000261371|ENST00000563924|PECAM1	nc|ENSG00000261371|P16284-5|PECAM1	nc|ENSG00000261371|P16284-5|PECAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9295959472656	3	403.928781	1208.76451	-1.8895	-0.00076324	3.7261	0.0015051	1.8366	0.00074185	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.76251	3	3579	3521;3532;3579		19.263	4.445	1	2300300			17304	8925	11706	11715	20011;20012;20013	20013					0.1684830712160874
ILAPWKKGLIA	11	Unmodified	_ILAPWKKGLIA_					0	0	0		nc|ENSG00000261371|P16284-5|PECAM1;nc|ENSG00000261371|P16284-3|PECAM1;nc|ENSG00000261371|P16284-4|PECAM1;nc|ENSG00000261371|P16284-2|PECAM1;nc|ENSG00000261371|P16284-6|PECAM1;ENSG00000261371|ENST00000563924|PECAM1	nc|ENSG00000261371|P16284-5|PECAM1	nc|ENSG00000261371|P16284-5|PECAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9302978515625	3	403.928781	1208.76451	0.25098	0.00010138	1.8051	0.00072914	2.0561	0.00083052	403.92942319004646	47.073	4.6899	47.112	45.811	50.501	0.038181					268	130	4	0	0	0	0.74022	3	3584	3533;3584;3602		24.232	13.645	1	2178500			17305	8925	11706	11715	20014;20015;20016	20015					0.1684830712160874
ILAPWKKGLIA	11	Unmodified	_ILAPWKKGLIA_					0	0	0		nc|ENSG00000261371|P16284-5|PECAM1;nc|ENSG00000261371|P16284-3|PECAM1;nc|ENSG00000261371|P16284-4|PECAM1;nc|ENSG00000261371|P16284-2|PECAM1;nc|ENSG00000261371|P16284-6|PECAM1;ENSG00000261371|ENST00000563924|PECAM1	nc|ENSG00000261371|P16284-5|PECAM1	nc|ENSG00000261371|P16284-5|PECAM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9295654296875	3	403.928781	1208.76451	0.5143	0.00020774	0.81845	0.0003306	1.3327	0.00053833	403.92898888715627	45.158	1.872	45.621	44.495	46.367	0.46313					165	45	4	0	0	0	0.76579	3	4256	4088;4256;4269		18.531	0.69791	1	5214800			17306	8925	11706	11715	20017;20018;20019	20018					0.1684830712160874
ILAQISPKN	9	Unmodified	_ILAQISPKN_					0	0	0			REV__ENST00000477232.5_1_2:162241962-162267908:+|nuORF	REV__ENST00000477232.5_1_2:162241962-162267908:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2978210449219	2	492.297842	982.581131	0.010803	5.3184E-06	-0.45723	-0.0002251	-0.44643	-0.00021978	492.2974871625459	54.049	1.8007	54.456	53.861	55.661	0.40663					79	42	3	0	0	0	0.41566	1	5515	5515		56.721	5.3856	1	1817100	+		17307	18097	11707	11716	20020	20020					0.08914333339930636
ILAQISPKN	9	Unmodified	_ILAQISPKN_					0	0	0			REV__ENST00000477232.5_1_2:162241962-162267908:+|nuORF	REV__ENST00000477232.5_1_2:162241962-162267908:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.2977600097656	2	492.297842	982.581131	-0.51073	-0.00025143	0.16757	8.2494E-05	-0.34316	-0.00016894	492.2977647758313	53.848	1.3804	54.432	53.872	55.253	0.58474					77	32	4	0	0	0	0.25483	1	5484	5484		68.787	5.8084	1	1886000	+		17308	18097	11707	11716	20021	20021					0.08914333339930636
ILARVFGLH	9	Unmodified	_ILARVFGLH_					0	0	0		ENSG00000182636|ENST00000649030|NDN	ENSG00000182636|ENST00000649030|NDN	ENSG00000182636|ENST00000649030|NDN	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3175659179688	2	513.316369	1024.61818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.691	1	53.686	53.186	54.186	-0.0053711								0	0	0	0.29299	1	4706	4706		33.516	5.2613	1				17309	7466	11708	11717	20022	20022					0.10686049676360199
ILASKPVP	8	Unmodified	_ILASKPVP_					0	0	0			REV__ENSG00000138439|ENST00000392238|FAM117B	REV__ENSG00000138439|ENST00000392238|FAM117B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2652587890625	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.92457	1	2764	2764		47.916	3.7988	1	681490	+		17310	19473	11709	11718	20023	20023					0.0979217825380374
ILASPVELAL	10	Unmodified	_ILASPVELAL_					0	0	0		ENST00000438277.5_1_2:128855105-128928859:+|nuORF;nc|ENSG00000136731|Q9NYU2-2|UGGT1;ENSG00000136731|ENST00000259253|UGGT1	ENST00000438277.5_1_2:128855105-128928859:+|nuORF	ENST00000438277.5_1_2:128855105-128928859:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3170776367188	2	513.3157	1024.61685	0.3202	0.00016436	0.87435	0.00044882	1.1945	0.00061318	513.3159908318282	43.284	1.4208	43.257	42.839	44.259	-0.026768					81	33	4	0	0	0	0.8608	1	3306	3306		34.173	3.8548	1	394850			17311	4132	11710	11719	20024	20024					0.1055237079692688
ILASTSTF	8	Unmodified	_ILASTSTF_					0	0	0		ENST00000403258.1_1_6:88985645-88985837:-|nuORF	ENST00000403258.1_1_6:88985645-88985837:-|nuORF	ENST00000403258.1_1_6:88985645-88985837:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.228271484375	2	420.229094	838.443634	0.39025	0.000164	-3.4243	-0.001439	-3.034	-0.001275	420.2275761359418	78.73	4.4768	79.141	77.509	81.986	0.4106					178	106	2	0	0	0	0.90465	1	8932	8932		40.573	7.057	1	423290			17312	11251	11711	11720	20025	20025					0.017950047405292935
ILATHCTI	8	Carbamidomethyl (C)	_ILATHC(Carbamidomethyl (C))TI_	ILATHC(1)TI		ILATHC(63)TI		0	1	0		ENSG00000120942|ENST00000376810|UBIAD1	ENSG00000120942|ENST00000376810|UBIAD1	ENSG00000120942|ENST00000376810|UBIAD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7475891113281	2	464.74967	927.484787	0.033	1.5337E-05	-3.6482	-0.0016955	-3.6152	-0.0016801	464.74781141297143	27.638	0.70639	27.614	27.313	28.019	-0.023556					26	17	2	0	0	0	0.79972	1	1261	1261		62.978	11.643	1	73291			17313	3159	11712	11721	20026	20026	37				0.018144425083619353
ILAVRSPIY	9	Unmodified	_ILAVRSPIY_					0	0	0			REV__ENSG00000114480|ENST00000429644|GBE1	REV__ENSG00000114480|ENST00000429644|GBE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3141479492188	2	516.316035	1030.61752	-0.63969	-0.00033028	-3.0425	-0.0015709	-3.6822	-0.0019012	516.3144152653146	102.55	1.0925	102.55	101.98	103.08	0					67	27	3	0	0	0	0.76996	1	10436	10436		33.516	10.473	1	640710	+		17314	18050	11713	11722	20027	20027					0.10343210236646883
ILAVRSPIY	9	Unmodified	_ILAVRSPIY_					0	0	0			REV__ENSG00000114480|ENST00000429644|GBE1	REV__ENSG00000114480|ENST00000429644|GBE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3136596679688	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.3064	-0.0011908	-3.8683	-0.0019972	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.7932	1	10655	10655		26.796	2.5934	1	1268100	+		17315	18050	11713	11722	20028	20028					0.10343210236646883
ILAWAPGVR	9	Unmodified	_ILAWAPGVR_					0	0	0		nc|ENSG00000014914|A4FU01-3|MTMR11;nc|ENSG00000014914|A4FU01-2|MTMR11;ENST00000492824.5_1_1:149905714-149908540:-|nuORF;nc|ENSG00000014914|A4FU01-5|MTMR11;ENST00000482343.5_1_1:149902724-149908540:-|nuORF;nc|ENSG00000014914|A4FU01-6|MTMR11;ENSG00000014914|ENST00000439741|MTMR11	nc|ENSG00000014914|A4FU01-3|MTMR11	nc|ENSG00000014914|A4FU01-3|MTMR11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956848144531	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.7932	1	3377	3377		20.482	0	1	3201400			17316	819	11714	11723	20029	20029					0.08446074267999393
ILCCVVVLI	9	Unmodified	_ILCCVVVLI_					0	0	0			REV__ENST00000463593.6_1_9:95060120-95060712:-|nuORF	REV__ENST00000463593.6_1_9:95060120-95060712:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7909240722656	2	487.792492	973.570431	-0.48923	-0.00023864	-3.3016	-0.0016105	-3.7908	-0.0018491	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.72098	1	9794	9794		39.021	0	1	1599600	+		17317	27078	11715	11724	20030	20030					0.08258891369644061
ILCGKGIVTA	10	Unmodified	_ILCGKGIVTA_					0	0	0			REV__nc|ENSG00000111731|Q86YS7|C2CD5;REV__nc|ENSG00000111731|Q86YS7-5|C2CD5	REV__nc|ENSG00000111731|Q86YS7-5|C2CD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.791259765625	2	487.788795	973.563038	0.6235	0.00030414	2.5998	0.0012681	3.2233	0.0015723	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.85934	1	8023	8023		35.618	2.1027	1	479320	+		17318	17893;29777	11716	11725	20031	20031					0.07519875093601058
ILCKHKRRGGK	11	Unmodified	_ILCKHKRRGGK_					0	0	0			REV__ENST00000481894.1_1_1:115138166-115167938:-|nuORF	REV__ENST00000481894.1_1_1:115138166-115167938:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3934326171875	2	648.39569	1294.77683	-1.1413	-0.00074001	-2.9565	-0.001917	-4.0978	-0.002657	648.3936534392657	107.12	0.99413	107.16	106.63	107.62	0.036118					92	23	4	0	0	0	0.6921	1	11427	11427		32.812	3.6424	1	53885000	+		17319	27454	11717	11726	20032	20032					0.14123020312968038
ILCLTIVVGT	10	Unmodified	_ILCLTIVVGT_					0	0	0			REV__ENSG00000165168|ENST00000378588|CYBB	REV__ENSG00000165168|ENST00000378588|CYBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3137817382812	2	516.312103	1030.60965	-0.25527	-0.0001318	4.18	0.0021582	3.9248	0.0020264	516.3141964907301	102.01	1.1313	102.2	101.89	103.02	0.19484					90	27	4	0	0	0	0.86452	1	10706	10706		30.504	2.2494	1	1199700	+		17320	21155	11718	11727	20033	20033					0.09557314924904858
ILCLTIVVGT	10	Unmodified	_ILCLTIVVGT_					0	0	0			REV__ENSG00000165168|ENST00000378588|CYBB	REV__ENSG00000165168|ENST00000378588|CYBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3113403320312	2	516.312103	1030.60965	-0.2553	-0.00013181	4.369	0.0022558	4.1137	0.0021239	516.3144185010789	103.22	1.1465	103.4	103.01	104.15	0.18298					74	28	3	0	0	0	0.8608	1	10984	10984		34.173	1.3601	1	978380	+		17321	21155	11718	11727	20034	20034					0.09557314924904858
ILCLTIVVGT	10	Unmodified	_ILCLTIVVGT_					0	0	0			REV__ENSG00000165168|ENST00000378588|CYBB	REV__ENSG00000165168|ENST00000378588|CYBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3147583007812	2	516.312103	1030.60965	1.9037	0.0009829	1.7854	0.00092181	3.6891	0.0019047	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.85934	1	12066	12066		35.618	10.044	1	22616000	+		17322	21155	11718	11727	20035	20035					0.09557314924904858
ILCLTIVVGT	10	Unmodified	_ILCLTIVVGT_					0	0	0			REV__ENSG00000165168|ENST00000378588|CYBB	REV__ENSG00000165168|ENST00000378588|CYBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3146362304688	2	516.312103	1030.60965	1.791	0.00092474	1.8914	0.00097654	3.6824	0.0019013	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.86589	1	12123	12123		29.15	0	1	24820000	+		17323	21155	11718	11727	20036	20036					0.09557314924904858
ILCMSLLEK	9	Unmodified	_ILCMSLLEK_					0	0	0			REV__ENST00000586860.1_1_19:44503294-44506799:-|nuORF	REV__ENST00000586860.1_1_19:44503294-44506799:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.2910766601562	2	525.290314	1048.56607	1.1129	0.0005846	-0.53544	-0.00028126	0.57747	0.00030334	525.2899523263453	18.171	0.46518	17.694	17.518	17.983	-0.47694					20	9	3	0	0	0	0.43338	1	356	356		55.504	5.9682	1	157350	+		17324	29115	11719	11728	20037	20037					0.04373382156086336
ILCNPATH	8	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ILC(Carbamidomethyl (C))NPATH_	ILC(1)NPATH		ILC(68)NPATH		1	1	0			REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.23626708984375	2	484.236927	966.459301	1.1008	0.00053307	-2.7789	-0.0013456	-1.678	-0.00081256	484.2355889219141	87.173	0.81998	87.099	86.646	87.466	-0.073997					58	18	4	0	0	0	0.67263	1	9010	9010		68.485	10.673	1	2636900	+		17325	25206	11720	11729	20038	20038	306				-0.025270320140862168
ILCNPATH	8	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ILC(Carbamidomethyl (C))NPATH_	ILC(1)NPATH		ILC(58)NPATH		1	1	0			REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.2361145019531	2	484.236927	966.459301	-0.94068	-0.00045551	-0.68139	-0.00032995	-1.6221	-0.00078547	484.236594071932	86.919	0.82059	86.975	86.524	87.344	0.055649					60	18	4	0	0	0	0.88944	1	8874	8874		57.811	7.7867	1	2745600	+		17326	25206	11720	11729	20039	20039	306				-0.025270320140862168
ILCNPATH	8	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ILC(Carbamidomethyl (C))NPATH_	ILC(1)NPATH		ILC(58)NPATH		1	1	0			REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.2364196777344	2	484.236927	966.459301	0.65008	0.00031479	-1.834	-0.00088808	-1.1839	-0.00057328	484.23610614821564	85.519	1.189	85.667	85.254	86.442	0.14857					84	27	5	0	0	0	0.88944	1	8396	8396		57.811	7.7867	1	7052700	+		17327	25206	11720	11729	20040	20040	306				-0.025270320140862168
ILCNPATH	8	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ILC(Carbamidomethyl (C))NPATH_	ILC(1)NPATH		ILC(68)NPATH		1	1	0			REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.236328125	2	484.236927	966.459301	0.6612	0.00032018	-2.5089	-0.0012149	-1.8477	-0.00089473	484.2357851078287	86.742	0.89272	86.891	86.401	87.294	0.14902					72	20	5	0	0	0	0.67263	1	8563	8563		68.485	15.133	1	4330200	+		17328	25206	11720	11729	20041	20041	306				-0.025270320140862168
ILCNPATH	8	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ILC(Carbamidomethyl (C))NPATH_	ILC(1)NPATH		ILC(68)NPATH		1	1	0			REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2361145019531	2	484.236927	966.459301	0.22337	0.00010816	-2.9462	-0.0014267	-2.7229	-0.0013185	484.2359214945001	86.186	1.2292	86.629	86.074	87.303	0.44331					103	29	6	0	0	0	0.67263	1	10093	10093		68.485	9.7027	1	37343000	+		17329	25206	11720	11729	20042	20042	306				-0.025270320140862168
ILCNPATH	8	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ILC(Carbamidomethyl (C))NPATH_	ILC(1)NPATH		ILC(58)NPATH		1	1	0			REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2362976074219	2	484.236927	966.459301	0.39551	0.00019152	-2.3516	-0.0011387	-1.9561	-0.00094721	484.23583864352696	86.77	1.4541	87.217	86.978	88.432	0.44629					87	34	4	0	0	0	0.88944	1	10165	10165		57.811	6.4758	1	8816400	+		17330	25206	11720	11729	20043	20043	306				-0.025270320140862168
ILCNPATH	8	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ILC(Carbamidomethyl (C))NPATH_	ILC(1)NPATH		ILC(52)NPATH		1	1	0			REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2366638183594	2	484.236927	966.459301	-0.37908	-0.00018357	-1.5342	-0.00074294	-1.9133	-0.0009265	484.2364959781966	84.251	0.72864	84.698	84.224	84.952	0.44736					63	17	5	0	0	0	0.93529	1	9820	9820		52.299	6.3472	1	11473000	+		17331	25206	11720	11729	20044	20044	306				-0.025270320140862168
ILCNPATH	8	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ILC(Carbamidomethyl (C))NPATH_	ILC(1)NPATH		ILC(58)NPATH		1	1	0			REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2359313964844	2	484.236927	966.459301	-0.53754	-0.00026029	-2.2523	-0.0010907	-2.7899	-0.001351	484.2362894528465	84.849	1.2824	85.296	84.912	86.194	0.44736					130	31	5	0	0	0	0.88944	1	9989	9989		57.811	11.839	1	48085000	+		17332	25206	11720	11729	20045	20045	306				-0.025270320140862168
ILCNPATH	8	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))ILC(Carbamidomethyl (C))NPATH_	ILC(1)NPATH		ILC(58)NPATH		1	1	0			REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	REV__ENST00000337393.9_1_1:91447916-91487568:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2361145019531	2	484.236927	966.459301	-1.0641	-0.00051528	-0.85776	-0.00041536	-1.9219	-0.00093064	484.2366198797029	86.871	1.6056	87.325	87.019	88.625	0.45429					96	38	4	0	0	0	0.88944	1	10186	10186		57.811	7.7867	1	9271700	+		17333	25206	11720	11729	20046	20046	306				-0.025270320140862168
ILDARAGEIEL	11	Unmodified	_ILDARAGEIEL_					0	0	0			REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9	REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	600.3349609375	2	600.335153	1198.65575	0.97496	0.0005853	-3.1335	-0.0018811	-2.1585	-0.0012958	600.3333001736194	93.972	2.6072	94.2	93.361	95.968	0.22863					134	62	3	0	0	0	0.62614	1	9644	9644		41.427	0.64845	1	602950	+		17334	19479	11721	11730	20047	20047					0.0643705136067183
ILDAVVVVV	9	Unmodified	_ILDAVVVVV_					0	0	0		nc|ENSG00000122986|Q96D96-2|HVCN1;nc|ENSG00000122986|Q96D96-4|HVCN1;nc|ENSG00000122986|Q96D96-3|HVCN1;ENSG00000122986|ENST00000242607|HVCN1	nc|ENSG00000122986|Q96D96-2|HVCN1	nc|ENSG00000122986|Q96D96-2|HVCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8002624511719	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	1	3544	3544		12.959	0	1	1294000			17335	3257	11722	11731	20048	20048					0.11905003113815837
ILDKVTPNR	9	Unmodified	_ILDKVTPNR_					0	0	0			REV__nc|ENSG00000164078|Q04912-2|MST1R	REV__nc|ENSG00000164078|Q04912-2|MST1R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.3131713867188	2	528.314023	1054.61349	0.80818	0.00042697	-0.51596	-0.00027259	0.29222	0.00015439	528.3138274474713	98.246	1.1968	98.407	97.84	99.037	0.16074					66	26	4	0	0	0	0.7932	1	10209	10209		23.042	0	1	380980	+		17336	21026	11723	11732	20049	20049					0.08837120742941806
ILDPLTLVQ	9	Unmodified	_ILDPLTLVQ_					0	0	0		ENSG00000152193|ENST00000282003|OBI1	ENSG00000152193|ENST00000282003|OBI1	ENSG00000152193|ENST00000282003|OBI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3095703125	2	506.307875	1010.6012	-0.17528	-8.8744E-05	2.9421	0.0014896	2.7668	0.0014009	506.3094556948668	48.133	0.75604	48.04	47.615	48.371	-0.093178					26	19	2	0	0	0	0.78983	1	3650	3650		27.882	2.4321	1	84185			17337	5159	11724	11733	20050	20050					0.09632084279905939
ILDQKINEV	9	Unmodified	_ILDQKINEV_					0	0	0		ENST00000446285.5_1_2:10584646-10585158:-|nuORF;ENSG00000115758|ENST00000234111|ODC1	ENST00000446285.5_1_2:10584646-10585158:-|nuORF	ENST00000446285.5_1_2:10584646-10585158:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.3101806640625	2	536.305864	1070.59717	0.35676	0.00019133	-0.50638	-0.00027157	-0.14962	-8.024E-05	536.3055717584001	47.444	0.44111	47.481	47.151	47.592	0.037731					19	12	2	0	0	0	0.14236	1	3552	3552		85.161	8.3142	1	258950			17338	2870	11725	11734	20051	20051					0.06469994786175448
ILDQKINEV	9	Unmodified	_ILDQKINEV_					0	0	0		ENST00000446285.5_1_2:10584646-10585158:-|nuORF;ENSG00000115758|ENST00000234111|ODC1	ENST00000446285.5_1_2:10584646-10585158:-|nuORF	ENST00000446285.5_1_2:10584646-10585158:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	536.305864	1070.59717	-0.052221	-2.8007E-05	-0.65568	-0.00035165	-0.7079	-0.00037965	536.3055027696377	47.425	0.39083	47.338	47.053	47.443	-0.087646	-0.072351	-0.0001995	NaN	85.161	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	240830			17339	2870	11725	11734							0.06469994786175448
ILDRIGIPKKG	11	Unmodified	_ILDRIGIPKKG_					0	0	0			REV__ENST00000431975.6_1_6:131603480-131603741:+|nuORF	REV__ENST00000431975.6_1_6:131603480-131603741:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.92974853515625	3	403.92744	1208.76049	2.3249	0.0009391	3.1739	0.001282	5.4989	0.0022211	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.76892	1	3871	3871		17.833	3.7471	1	2948200	+		17340	26628	11726	11735	20052	20052					0.16446217627867554
ILDRIGIPKKG	11	Unmodified	_ILDRIGIPKKG_					0	0	0			REV__ENST00000431975.6_1_6:131603480-131603741:+|nuORF	REV__ENST00000431975.6_1_6:131603480-131603741:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9288330078125	3	403.92744	1208.76049	0.5143	0.00020774	4.1381	0.0016715	4.6524	0.0018792	403.92898888715627	45.158	1.872	45.621	44.495	46.367	0.46313					165	45	4	0	0	0	0.76087	2	4124	4124;4148		19.627	6.6695	1	5214800	+		17341	26628	11726	11735	20053;20054	20053					0.16446217627867554
ILDRRASL	8	Unmodified	_ILDRRASL_					0	0	0			REV__ENST00000378770.1_1_4:190394307-190396341:+|nuORF	REV__ENST00000378770.1_1_4:190394307-190396341:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2891845703125	2	472.287808	942.561064	2.1484	0.0010146	-2.0454	-0.000966	0.103	4.8644E-05	472.28673091824714	113.99	1.2395	114.01	113.14	114.38	0.020027					83	56	2	0	0	0	0.80706	1	13736	13736		19.36	1.995	1	98727	+		17342	25905	11727	11736	20055	20055					0.08748582399982752
ILDSMKMILL	10	2 Oxidation (M)	_ILDSM(Oxidation (M))KM(Oxidation (M))ILL_		ILDSM(1)KM(1)ILL		ILDSM(49)KM(49)ILL	0	0	2			REV__ENST00000368845.5_1_10:126091533-126091608:-|nuORF	REV__ENST00000368845.5_1_10:126091533-126091608:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	605.3389282226562	2	604.835085	1207.65562	-0.93817	-0.00056744	1.0148	0.00061378	0.076618	4.6341E-05	604.8357021573429	50.125	0.54184	50.125	49.883	50.425	0					30	12	3	0	0	0	0.6116	1	4006	4006		49.442	8.8689	1	140270	+		17343	25606	11728	11737	20056	20056		397;398			0.06009592044824785
ILDVRREG	8	Unmodified	_ILDVRREG_					0	0	0		ENSG00000018699|ENST00000317907|TTC27	ENSG00000018699|ENST00000317907|TTC27	ENSG00000018699|ENST00000317907|TTC27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2778015136719	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.884	1	10165	10165		33.516	1.5607	1	6350300			17344	834	11729	11738	20057	20057					0.060319920203255606
ILEAALIAL	9	Unmodified	_ILEAALIAL_					0	0	0		ENSG00000102401|ENST00000471229|ARMCX3	ENSG00000102401|ENST00000471229|ARMCX3	ENSG00000102401|ENST00000471229|ARMCX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.80023193359375	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.7932	1	3295	3295		25.45	6.0902	1	210360			17345	2003	11730	11739	20058	20058					0.11905003113781731
ILECVKGII	9	Unmodified	_ILECVKGII_					0	0	0			REV__nc|ENSG00000157657|Q5T7W0-2|ZNF618	REV__nc|ENSG00000157657|Q5T7W0-2|ZNF618	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3009033203125	2	494.298996	986.583439	-0.58723	-0.00029027	4.0172	0.0019857	3.43	0.0016955	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.76255	1	10121	10121		35.618	4.0885	1	65263000	+		17346	29956	11731	11740	20059	20059					0.08961045753392227
ILECVKGII	9	Unmodified	_ILECVKGII_					0	0	0			REV__nc|ENSG00000157657|Q5T7W0-2|ZNF618	REV__nc|ENSG00000157657|Q5T7W0-2|ZNF618	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.30078125	2	494.298996	986.583439	0.76681	0.00037903	2.7292	0.001349	3.496	0.0017281	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.72402	1	10154	10154		38.806	1.647	1	52135000	+		17347	29956	11731	11740	20060	20060					0.08961045753392227
ILEENLFY	8	Unmodified	_ILEENLFY_					0	0	0		ENSG00000177409|ENST00000318238|SAMD9L	ENSG00000177409|ENST00000318238|SAMD9L	ENSG00000177409|ENST00000318238|SAMD9L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.7682495117188	2	520.768583	1039.52261	0.14658	7.6336E-05	-0.53726	-0.00027979	-0.39068	-0.00020345	520.7680763861565	83.008	1.2473	83.482	82.919	84.166	0.47383					80	29	4	0	0	0	0.38743	1	9659	9659		92.191	3.5478	1	1692100			17348	7138	11732	11741	20061	20061					0.00443231974804803
ILEFDPVVMA	10	Unmodified	_ILEFDPVVMA_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9;REV__ENSG00000187775|ENST00000389840|DNAH17	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3299560546875	2	567.299193	1132.58383	1.6307	0.00092509	0.41076	0.00023302	2.0414	0.0011581	567.2984634114327	90.86	0.84584	90.793	90.35	91.196	-0.067093					25	20	2	0	0	0	0.37624	1	9533	9533		29.15	7.1897	1	57261	+		17349	16117;22946	11733	11742	20062	20062					0.02284420682599375
ILEFPTNSCW	10	Unmodified	_ILEFPTNSCW_					0	0	0			REV__nc|ENSG00000180354|Q8N3F0-4|MTURN	REV__nc|ENSG00000180354|Q8N3F0-4|MTURN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.2857666015625	2	605.284074	1208.5536	0.98248	0.00059468	2.5271	0.0015296	3.5095	0.0021243	605.2852052046003	58.208	1.6782	58.295	57.834	59.512	0.087002					167	73	3	0	0	0	0.50904	1	4950	4950		42.864	11.334	1	1590000	+		17350	22393	11734	11743	20063	20063					-0.04233937982621683
ILEFPTNSCW	10	Unmodified	_ILEFPTNSCW_					0	0	0			REV__nc|ENSG00000180354|Q8N3F0-4|MTURN	REV__nc|ENSG00000180354|Q8N3F0-4|MTURN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.2847900390625	2	605.284074	1208.5536	0.52217	0.00031606	2.8738	0.0017395	3.396	0.0020555	605.2854781639707	58.165	1.929	58.276	57.865	59.794	0.11027					166	76	4	0	0	0	0.86338	1	5002	5002		26.693	0	1	1588900	+		17351	22393	11734	11743	20064	20064					-0.04233937982621683
ILEGSLRR	8	Unmodified	_ILEGSLRR_					0	0	0			REV__ENSG00000184261|ENST00000327876|KCNK12	REV__ENSG00000184261|ENST00000327876|KCNK12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28790283203125	2	472.287808	942.561064	-1.7052	-0.00080535	2.0866	0.00098547	0.38138	0.00018012	472.2887688366916	99.113	1.9296	99.299	98.808	100.74	0.18582					95	44	3	0	0	0	0.81548	1	10223	10223		20.482	0	1	583920	+		17352	22658	11735	11744	20065	20065					0.08748582399982752
ILEIVKPA	8	Unmodified	_ILEIVKPA_					0	0	0		ENSG00000154727|ENST00000400075|GABPA;ENST00000419271.1_1_7:63353684-63354623:+|nuORF;ENST00000487266.1_1_21:27107719-27124637:+|nuORF	ENSG00000154727|ENST00000400075|GABPA	ENSG00000154727|ENST00000400075|GABPA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.787353515625	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.81724	1	2703	2703		14.664	0.88877	1	11085000			17353	5290	11736	11745	20066	20066					0.11308733942314575
ILEIVKPA	8	Unmodified	_ILEIVKPA_					0	0	0		ENSG00000154727|ENST00000400075|GABPA;ENST00000419271.1_1_7:63353684-63354623:+|nuORF;ENST00000487266.1_1_21:27107719-27124637:+|nuORF	ENSG00000154727|ENST00000400075|GABPA	ENSG00000154727|ENST00000400075|GABPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7876281738281	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.80963	1	2986	2986		15.636	1.8609	1	12523000			17354	5290	11736	11745	20067	20067					0.11308733942314575
ILEKAADN	8	Unmodified	_ILEKAADN_					0	0	0			REV__ENSG00000162944|ENST00000295049|RFTN2	REV__ENSG00000162944|ENST00000295049|RFTN2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2754211425781	2	437.23745	872.460347	0.37328	0.00016321	-1.9149	-0.00083725	-1.5416	-0.00067404	437.23745200934144	27.65	0.10542	27.691	27.628	27.733	0.040834					4	2	2	0	0	0	0.4196	1	1254	1254		3.1592	0.2298	1	5055	+		17355	20866	11737	11746	20068	20068					0.019015056264606756
ILELGRCQ	8	Unmodified	_ILELGRCQ_					0	0	0			REV__nc|ENSG00000182199|P34897-3|SHMT2	REV__nc|ENSG00000182199|P34897-3|SHMT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2556457519531	2	466.25512	930.495686	-1.5133	-0.00070558	-1.0867	-0.00050666	-2.6	-0.0012122	466.2545098406443	61.17	1.13	61.17	60.102	61.232	0					111	49	3	0	0	0	0.87922	1	5334	5334		31.955	0	1	374960	+		17356	22508	11738	11747	20069	20069					0.027658448826286985
ILEQTLMY	8	Oxidation (M)	_ILEQTLM(Oxidation (M))Y_		ILEQTLM(1)Y		ILEQTLM(74)Y	0	0	1		ENSG00000101353|ENST00000343811|MROH8;nc|ENSG00000101353|Q9H579-2|MROH8	ENSG00000101353|ENST00000343811|MROH8	ENSG00000101353|ENST00000343811|MROH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7604370117188	2	513.762443	1025.51033	-0.043813	-2.251E-05	-2.8137	-0.0014456	-2.8576	-0.0014681	513.760887161789	84.602	1.5157	85.041	84.386	85.902	0.43924					93	37	5	0	0	0	0.53378	1	9891	9891		74.255	8.4519	1	5808400			17357	1937	11739	11748	20070	20070		38			-0.0014012775986884662
ILERVLQKQQV	11	Unmodified	_ILERVLQKQQV_					0	0	0			REV__nc|ENSG00000258659|Q9BYJ4-2|TRIM34	REV__nc|ENSG00000258659|Q9BYJ4-2|TRIM34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.94378662109375	3	451.945271	1352.81398	-1.2962	-0.0005858	-3.44	-0.0015547	-4.7362	-0.0021405	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.76892	1	4250	4250		17.833	1.3033	1	734340	+		17358	23928	11740	11749	20071	20071					0.15168970339732368
ILERVLQKQQV	11	Unmodified	_ILERVLQKQQV_					0	0	0			REV__nc|ENSG00000258659|Q9BYJ4-2|TRIM34	REV__nc|ENSG00000258659|Q9BYJ4-2|TRIM34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.94293212890625	3	451.945271	1352.81398	-0.53384	-0.00024127	-4.227	-0.0019104	-4.7608	-0.0021516	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.75121	1	4316	4316		21.78	0.74819	1	920720	+		17359	23928	11740	11749	20072	20072					0.15168970339732368
ILESSVVEL	9	Unmodified	_ILESSVVEL_					0	0	0			REV__nc|ENSG00000142609|Q9C0B2-2|CFAP74	REV__nc|ENSG00000142609|Q9C0B2-2|CFAP74	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7812194824219	2	494.78169	987.548827	-0.78615	-0.00038897	-1.9088	-0.00094446	-2.695	-0.0013334	494.78060020608814	86.18	3.7368	86.627	85.355	89.092	0.44736					160	91	3	0	0	0	0.69914	1	10094	10094		40.573	8.6178	1	656610	+		17360	19746	11741	11750	20073	20073					0.054555011462980474
ILEVAPILF	9	Unmodified	_ILEVAPILF_					0	0	0			REV__ENSG00000088205|ENST00000263239|DDX18	REV__ENSG00000088205|ENST00000263239|DDX18	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.23089599609375	2	507.815336	1013.61612	-0.5123	-0.00026015	-0.32486	-0.00016497	-0.83716	-0.00042512	507.8159372994253	29.987	0.069771	30.053	30.005	30.075	0.066727					4	2	2	0	0	0	0.20789	1	1301	1301		19.36	7.1531	1	13158	+		17361	16939	11742	11751	20074	20074					0.10985576147891152
ILEVNAYN	8	Unmodified	_ILEVNAYN_					0	0	0			REV__nc|ENSG00000076555|O00763-3|ACACB;REV__ENSG00000278540|ENST00000616317|ACACA	REV__ENSG00000278540|ENST00000616317|ACACA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.244873046875	2	468.245275	934.475997	0.1062	4.9729E-05	-0.063897	-2.992E-05	0.042305	1.9809E-05	468.2450979766261	47.531	1.8726	47.521	47.036	48.909	-0.0093269					110	52	3	0	0	0	0.90465	1	3846	3846		40.573	0	1	1766700	+		17362	24037;16727	11743	11752	20075	20075					0.006137921435083626
ILEYDNVGEAS	11	Unmodified	_ILEYDNVGEAS_					0	0	0		nc|ENSG00000275835|Q96RT8-2|TUBGCP5;ENSG00000275835|ENST00000615383|TUBGCP5	nc|ENSG00000275835|Q96RT8-2|TUBGCP5	nc|ENSG00000275835|Q96RT8-2|TUBGCP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.2861938476562	2	605.285325	1208.5561	-0.21892	-0.00013251	1.1649	0.00070509	0.94597	0.00057258	605.285887959875	58.271	1.5426	58.263	57.785	59.328	-0.0074387					123	65	2	0	0	0	0.59831	1	4919	4919		35.152	12.11	1	1563500			17363	9008	11744	11753	20076	20076					-0.03983811043940477
ILFELCVGRK	10	Unmodified	_ILFELCVGRK_					0	0	0		nc|ENSG00000145348|Q8TEA7-3|TBCK;ENSG00000145348|ENST00000394708|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.343017578125	2	589.341726	1176.6689	-0.65438	-0.00038565	2.6476	0.0015603	1.9932	0.0011747	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.86218	1	10031	10031		32.812	2.3088	1	16804000			17364	4762	11745	11754	20077	20077					0.08763210939059718
ILFELCVGRK	10	Unmodified	_ILFELCVGRK_					0	0	0		nc|ENSG00000145348|Q8TEA7-3|TBCK;ENSG00000145348|ENST00000394708|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3425903320312	2	589.341726	1176.6689	0.82336	0.00048524	1.2532	0.00073856	2.0765	0.0012238	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.86718	1	11335	11335		27.882	1.1893	1	9460500			17365	4762	11745	11754	20078	20078					0.08763210939059718
ILFELCVGRK	10	Unmodified	_ILFELCVGRK_					0	0	0		nc|ENSG00000145348|Q8TEA7-3|TBCK;ENSG00000145348|ENST00000394708|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.343017578125	2	589.341726	1176.6689	0.15554	9.1664E-05	1.9962	0.0011764	2.1517	0.0012681	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.86218	1	11456	11456		32.812	0	1	10540000			17366	4762	11745	11754	20079	20079					0.08763210939059718
ILFIFFGT	8	Unmodified	_ILFIFFGT_					0	0	0			REV__ENST00000274071.6_1_4:157683628-157683685:-|nuORF	REV__ENST00000274071.6_1_4:157683628-157683685:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2781066894531	2	479.275847	956.537141	-1.1288	-0.000541	4.4078	0.0021125	3.279	0.0015715	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.87276	1	7578	7578		29.842	0.69198	1	1311100	+		17367	24563	11746	11755	20080	20080					0.05713348913616301
ILFKLGIL	8	Unmodified	_ILFKLGIL_					0	0	0			REV__ENST00000261349.8_1_12:12397271-12397439:-|nuORF	REV__ENST00000261349.8_1_12:12397271-12397439:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	458.7873229980469	2	458.815139	915.615725	-0.1285	-5.8959E-05	-4.0138	-0.0018416	-4.1423	-0.0019006	458.8130844804848	93.045	0.2458	93.115	92.97	93.216	0.06987					6	5	2	0	0	0	0.4196	1	9652	9652		21.702	0	1	41075	+		17368	24385	11747	11756	20081	20081					0.1545420121871075
ILFKNSLIQ	9	Unmodified	_ILFKNSLIQ_					0	0	0			REV__nc|ENSG00000172113|O75414-2|NME6	REV__nc|ENSG00000172113|O75414-2|NME6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3271484375	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12572	12572		25.45	1.2474	1	4041000	+		17369	21802	11748	11757	20082	20082					0.10939479408125408
ILFKTFPALLF	11	Unmodified	_ILFKTFPALLF_					0	0	0			REV__nc|ENSG00000168679|O15374-3|SLC16A4	REV__nc|ENSG00000168679|O15374-3|SLC16A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2680358886719	3	437.268804	1308.78458	-1.5729	-0.00068777	-0.48003	-0.0002099	-2.0529	-0.00089767	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.78683	1	4156	4156		14.086	0.57807	1	4358700	+		17370	21510	11749	11758	20083	20083					0.14254058061555952
ILFLDLPMA	9	Unmodified	_ILFLDLPMA_					0	0	0			REV__ENST00000332180.9_1_12:105550539-105551042:+|nuORF	REV__ENST00000332180.9_1_12:105550539-105551042:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7931518554688	2	516.793546	1031.57254	-0.27573	-0.0001425	-0.082853	-4.2818E-05	-0.35858	-0.00018531	516.7933490368572	86.056	2.7275	86.241	84.67	87.398	0.18523					138	63	3	0	0	0	0.76996	1	8420	8420		33.516	0	1	324400	+		17371	25136	11750	11759	20084	20084					0.05801643379095367
ILFMCVPG	8	Unmodified	_ILFMCVPG_					0	0	0		ENST00000515837.6_1_11:61159565-61159811:+|nuORF	ENST00000515837.6_1_11:61159565-61159811:+|nuORF	ENST00000515837.6_1_11:61159565-61159811:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2247619628906	2	440.226985	878.439417	0.18305	8.0584E-05	-4.1285	-0.0018175	-3.9454	-0.0017369	440.2251102396648	17.293	0.22632	16.811	16.672	16.898	-0.48256					9	4	3	0	0	0	0.91333	1	242	242		43.626	6.5976	1	69461			17372	13092	11751	11760	20085	20085					-0.004664992783887101
ILFNLLPAHVA	11	Unmodified	_ILFNLLPAHVA_					0	0	0		ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.363525390625	2	604.363516	1206.71248	3.6458	0.0022034	1.558	0.00094162	5.2038	0.003145	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.732	2	12986	12986;13035		16.473	0	1	5883900			17373	5998	11752	11761	20086;20087	20086					0.11739143707836774
ILFQSKTVAV	10	Unmodified	_ILFQSKTVAV_					0	0	0			REV__ENST00000466883.5_1_7:65439809-65440058:-|nuORF	REV__ENST00000466883.5_1_7:65439809-65440058:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3323364257812	2	553.334424	1104.6543	-1.4413	-0.00079751	-2.1828	-0.0012078	-3.6241	-0.0020053	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.85939	1	10007	10007		23.042	1.0826	1	2490200	+		17374	21616	11753	11762	20088	20088					0.10615462062560255
ILFRVCVG	8	Unmodified	_ILFRVCVG_					0	0	0		ENST00000482592.5_1_1:245912734-245912785:-|nuORF	ENST00000482592.5_1_1:245912734-245912785:-|nuORF	ENST00000482592.5_1_1:245912734-245912785:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.7657775878906	2	453.765123	905.515694	0.22799	0.00010345	1.49	0.00067612	1.718	0.00077957	453.76577882768925	41.923	1.745	41.996	41.584	43.329	0.073414					97	46	4	0	0	0	0.86791	1	2812	2812		28.254	5.2176	1	672610			17375	12490	11754	11763	20089	20089					0.0591564061326153
ILFTLQQTRWL	11	Unmodified	_ILFTLQQTRWL_					0	0	0		ENSG00000072954|ENST00000187762|TMEM38A	ENSG00000072954|ENST00000187762|TMEM38A	ENSG00000072954|ENST00000187762|TMEM38A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.6085205078125	3	473.61	1417.80817	0.70712	0.0003349	-3.6729	-0.0017395	-2.9658	-0.0014046	473.6081404123053	17.146	0.35825	16.663	16.493	16.851	-0.48256					17	7	3	0	0	0	0.71803	1	224	224		28.577	0.93281	1	115450			17376	1285	11755	11764	20090	20090					0.11597871828075768
ILFTVGMV	8	Unmodified	_ILFTVGMV_					0	0	0			REV__ENSG00000279486|ENST00000641258|OR2AG1	REV__ENSG00000279486|ENST00000641258|OR2AG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2561340332031	2	440.254057	878.493561	-1.055	-0.00046445	4.0449	0.0017808	2.99	0.0013163	440.255692333896	66.85	0.64691	66.903	66.553	67.2	0.052376					60	27	3	0	0	0	0.86288	1	5958	5958		26.796	1.3459	1	260280	+		17377	24041	11756	11765	20091	20091					0.04945416144835235
ILGALAPY	8	Unmodified	_ILGALAPY_					0	0	0		nc|ENSG00000182872|P98175-4|RBM10;nc|ENSG00000182872|P98175-3|RBM10;nc|ENSG00000182872|P98175-2|RBM10;ENSG00000182872|ENST00000377604|RBM10;nc|ENSG00000182872|P98175-5|RBM10	nc|ENSG00000182872|P98175-4|RBM10	nc|ENSG00000182872|P98175-4|RBM10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	409.2423400878906	2	409.244547	816.47454	-1.9333	-0.00079118	-2.25	-0.00092079	-4.1833	-0.001712	409.2433809144944	23.958	0.51268	24.016	23.787	24.299	0.058167					37	22	3	0	0	0	0.88393	1	793	793		33.493	8.989	1	32370			17378	7478	11757	11766	20092	20092					0.0589620284541752
ILGALAPY	8	Unmodified	_ILGALAPY_					0	0	0		nc|ENSG00000182872|P98175-4|RBM10;nc|ENSG00000182872|P98175-3|RBM10;nc|ENSG00000182872|P98175-2|RBM10;ENSG00000182872|ENST00000377604|RBM10;nc|ENSG00000182872|P98175-5|RBM10	nc|ENSG00000182872|P98175-4|RBM10	nc|ENSG00000182872|P98175-4|RBM10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	409.244547	816.47454	0.03833	1.5687E-05	-4.3568	-0.001783	-4.3184	-0.0017673	409.24258823272294	23.591	0.4317	23.686	23.464	23.896	0.094501	-0.1649	-0.00085322	NaN	33.493	23	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33426			17379	7478	11757	11766							0.0589620284541752
ILGAPEVL	8	Unmodified	_ILGAPEVL_					0	0	0		ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2485656738281	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.82464	2	9130	9130;9229		28.254	6.5519	1	50007000			17380	13493	11758	11767	20093;20094	20093					0.07228185499855044
ILGAPEVL	8	Unmodified	_ILGAPEVL_					0	0	0		ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2481994628906	2	406.249829	810.485105	1.1516	0.00046786	-4.2235	-0.0017158	-3.0718	-0.0012479	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.86791	1	9434	9434		28.254	6.5519	1	58759000			17381	13493	11758	11767	20095	20095					0.07228185499855044
ILGAPEVL	8	Unmodified	_ILGAPEVL_					0	0	0		ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.248291015625	2	406.249829	810.485105	0.64458	0.00026186	-3.2845	-0.0013343	-2.6399	-0.0010725	406.248379767224	90.786	2.0194	90.94	90.429	92.448	0.15388					81	48	3	0	0	0	0.81548	1	9130	9130		20.482	1.1219	1	878080			17382	13493	11758	11767	20096	20096					0.07228185499855044
ILGARQETY	9	Unmodified	_ILGARQETY_					0	0	0			REV__nc|ENSG00000109743|Q10588-2|BST1	REV__nc|ENSG00000109743|Q10588-2|BST1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.7827758789062	2	525.782556	1049.55056	-0.2585	-0.00013591	-0.31346	-0.00016481	-0.57195	-0.00030072	525.7823128170928	49.629	0.70844	49.605	49.235	49.943	-0.024029					34	15	3	0	0	0	0.64922	1	4267	4267		44.117	1.6423	1	247480	+		17383	17770	11759	11768	20097	20097					0.027765549549030766
ILGAVLPE	8	Unmodified	_ILGAVLPE_					0	0	0			REV__ENST00000291416.9_1_1:33611549-33612008:-|nuORF	REV__ENST00000291416.9_1_1:33611549-33612008:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24822998046875	2	406.249829	810.485105	0.62319	0.00025317	-3.6411	-0.0014792	-3.0179	-0.001226	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.86791	1	8943	8943		28.254	2.8041	1	38001000	+		17384	24668	11760	11769	20098	20098					0.07228185499843676
ILGDLGMQVT	10	Unmodified	_ILGDLGMQVT_					0	0	0		ENSG00000178074|ENST00000319974|C2orf69	ENSG00000178074|ENST00000319974|C2orf69	ENSG00000178074|ENST00000319974|C2orf69	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3036499023438	2	523.781167	1045.54778	1.1767	0.00061632	-0.53439	-0.0002799	0.64228	0.00033641	523.7798630941033	88.587	0.40759	89.036	88.833	89.241	0.44892					14	9	2	0	0	0	0.37624	1	10453	10453		31.53	0	1	49659			17385	7180	11761	11770	20099	20099					0.026829635057538326
ILGDPQIL	8	Unmodified	_ILGDPQIL_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6;ENST00000589803.5_1_17:67102167-67114054:-|nuORF	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7596130371094	2	434.760561	867.506569	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.521	1	87.722	87.222	88.222	0.20114								0	0	0	0.29353	1	8647	8647		28.254	1.4582	1				17386	5268	11762	11771	20100	20100					0.06751570528570028
ILGDPQIL	8	Unmodified	_ILGDPQIL_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6;ENST00000589803.5_1_17:67102167-67114054:-|nuORF	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7603759765625	2	434.760561	867.506569	0.15252	6.6311E-05	1.8637	0.00081025	2.0162	0.00087656	434.760660552279	87.036	1.2069	87.482	87.061	88.268	0.44628					53	28	4	0	0	0	0.87922	1	10270	10270		31.955	0	1	1015900			17387	5268	11762	11771	20101	20101					0.06751570528570028
ILGERRSN	8	Unmodified	_ILGERRSN_					0	0	0			REV__ENST00000424720.2_12:132824120-132905933:-|nuORF	REV__ENST00000424720.2_12:132824120-132905933:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7673034667969	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.90465	1	8647	8647		40.573	3.4135	1	547170	+		17388	22556	11763	11772	20102	20102					0.04590821360523023
ILGFPLRPN	9	Unmodified	_ILGFPLRPN_					0	0	0		ENSG00000130385|ENST00000252677|BMP15	ENSG00000130385|ENST00000252677|BMP15	ENSG00000130385|ENST00000252677|BMP15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.80859375	2	513.808377	1025.6022	-0.15906	-8.1728E-05	1.3381	0.00068753	1.179	0.0006058	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.77546	1	3604	3604		31.955	1.4512	1	1484700			17389	3643	11764	11773	20103	20103					0.09042343439477918
ILGFPVPNR	9	Unmodified	_ILGFPVPNR_					0	0	0		ENSG00000144468|ENST00000392062|RHBDD1	ENSG00000144468|ENST00000392062|RHBDD1	ENSG00000144468|ENST00000392062|RHBDD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.79705810546875	2	506.800552	1011.58655	-0.48557	-0.00024609	1.7036	0.00086341	1.2181	0.00061732	506.80138318270446	52.994	1.2868	53.041	52.134	53.421	0.047806					70	43	2	0	0	0	0.77546	1	4298	4298		31.955	3.7006	1	144880			17390	4710	11765	11774	20104	20104					0.08122056922422871
ILGFVHGG	8	Unmodified	_ILGFVHGG_					0	0	0		nc|ENSG00000260811|A6NMZ5|OR4C45	nc|ENSG00000260811|A6NMZ5|OR4C45	nc|ENSG00000260811|A6NMZ5|OR4C45	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2279968261719	2	400.226688	798.438824	1.1221	0.00044908	1.5017	0.000601	2.6237	0.0010501	400.22744040827075	52.487	1.5647	52.911	52.149	53.713	0.42348					74	37	3	0	0	0	0.85228	1	5302	5302		10.185	0	1	9430900			17391	15302	11766	11775	20105	20105					0.03154165388434649
ILGFVVNLI	9	Unmodified	_ILGFVVNLI_					0	0	0		ENSG00000162695|ENST00000357650|SLC30A7	ENSG00000162695|ENST00000357650|SLC30A7	ENSG00000162695|ENST00000357650|SLC30A7	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.3009948730469	2	494.315503	986.616454	-0.82665	-0.00040863	2.6861	0.0013278	1.8595	0.00091916	494.31739829245276	97.612	0.93748	97.612	97.337	98.274	0					36	21	3	0	0	0	0.20789	1	9856	9856		33.516	0	1	148840			17392	5720	11767	11776	20106	20106					0.12260995867757174
ILGGAAHRP	9	Unmodified	_ILGGAAHRP_					0	0	0		ENSG00000175189|ENST00000309668|INHBC	ENSG00000175189|ENST00000309668|INHBC	ENSG00000175189|ENST00000309668|INHBC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2593078613281	2	446.261594	890.508634	0.512	0.00022848	-3.1418	-0.0014021	-2.6298	-0.0011736	446.2599769742479	37.571	2.373	38.057	36.341	38.714	0.48581					136	58	5	0	0	0	0.7932	1	3008	3008		20.482	1.1219	1	3317300			17393	6994	11768	11777	20107	20107					0.059000440570343926
ILGGHLSD	8	Unmodified	_ILGGHLSD_					0	0	0		nc|ENSG00000149742|Q8IVM8-2|SLC22A9;ENSG00000149742|ENST00000279178|SLC22A9	nc|ENSG00000149742|Q8IVM8-2|SLC22A9	nc|ENSG00000149742|Q8IVM8-2|SLC22A9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2171936035156	2	406.21906	810.423567	-1.2103	-0.00049164	-1.9851	-0.00080637	-3.1954	-0.001298	406.21809428677255	86.069	1.1127	86.069	85.577	86.69	0					47	25	3	0	0	0	0.9159	1	8195	8195		44.531	14.213	1	169130			17394	5048	11769	11778	20108	20108					0.010772538005653587
ILGGLAYV	8	Unmodified	_ILGGLAYV_					0	0	0		nc|ENSG00000184999|Q63ZE4-2|SLC22A10;ENSG00000184999|ENST00000332793|SLC22A10	nc|ENSG00000184999|Q63ZE4-2|SLC22A10	nc|ENSG00000184999|Q63ZE4-2|SLC22A10	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2482604980469	2	403.244547	804.47454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.29	1	114.26	113.76	114.76	-0.024452								0	0	0	0.2945	1	12660	12660		33.493	0	1				17395	7665	11770	11779	20109	20109					0.06448202845422202
ILGGPVISL	9	Unmodified	_ILGGPVISL_					0	0	0		ENSG00000149571|ENST00000525144|KIRREL3;nc|ENSG00000149571|Q8IZU9-2|KIRREL3	ENSG00000149571|ENST00000525144|KIRREL3	ENSG00000149571|ENST00000525144|KIRREL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.778076171875	2	434.778754	867.542954	-0.97237	-0.00042277	4.234	0.0018408	3.2616	0.0014181	434.7805193577322	37.104	1.6925	37.05	36.066	37.758	-0.053555					155	37	5	0	0	0	0.7932	1	2382	2382		25.45	1.2474	1	5510500			17396	5035	11771	11780	20110	20110					0.10388447425293634
ILGGPVISL	9	Unmodified	_ILGGPVISL_					0	0	0		ENSG00000149571|ENST00000525144|KIRREL3;nc|ENSG00000149571|Q8IZU9-2|KIRREL3	ENSG00000149571|ENST00000525144|KIRREL3	ENSG00000149571|ENST00000525144|KIRREL3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2515869140625	2	434.778754	867.542954	1.7825	0.00077498	1.1014	0.00047886	2.8839	0.0012538	434.7793550028305	81.95	1.7289	82.008	81.128	82.857	0.057816					61	39	2	0	0	0	0.20789	1	8121	8121		12.207	0	1	62994			17397	5035	11771	11780	20111	20111					0.10388447425293634
ILGGPVISL	9	Unmodified	_ILGGPVISL_					0	0	0		ENSG00000149571|ENST00000525144|KIRREL3;nc|ENSG00000149571|Q8IZU9-2|KIRREL3	ENSG00000149571|ENST00000525144|KIRREL3	ENSG00000149571|ENST00000525144|KIRREL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7798767089844	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.7932	1	3542	3542		26.796	6.3143	1	2833200			17398	5035	11771	11780	20112	20112					0.10388447425293634
ILGGPVISL	9	Unmodified	_ILGGPVISL_					0	0	0		ENSG00000149571|ENST00000525144|KIRREL3;nc|ENSG00000149571|Q8IZU9-2|KIRREL3	ENSG00000149571|ENST00000525144|KIRREL3	ENSG00000149571|ENST00000525144|KIRREL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.780029296875	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.69914	1	2581	2581		40.573	1.7665	1	7451800			17399	5035	11771	11780	20113	20113					0.10388447425293634
ILGGVNNRIG	10	Unmodified	_ILGGVNNRIG_					0	0	0			REV__chr12:18143293-18198401|18|114.39|0.0|23.45|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|83	REV__chr12:18143293-18198401|18|114.39|0.0|23.45|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|83	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.79931640625	2	506.79854	1011.58253	0.2762	0.00013998	4.2956	0.002177	4.5718	0.002317	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.8608	1	3673	3673		34.173	2.2177	1	416790	+		17400	15521	11772	11781	20114	20114					0.07719967428704422
ILGHFVLL	8	Unmodified	_ILGHFVLL_					0	0	0			REV__ENST00000481169.5_1_3:148896402-148897410:-|nuORF	REV__ENST00000481169.5_1_3:148896402-148897410:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2634582519531	2	456.289288	910.564024	-1.4448	-0.00065926	3.1871	0.0014542	1.7422	0.00079496	456.28968040304227	79.129	0.14693	79.228	79.141	79.288	0.098701					5	3	2	0	0	0	0.4196	1	7457	7457		16.705	0	1	19843	+		17401	27430	11773	11782	20115	20115					0.1051645752480681
ILGIFMTILL	10	Unmodified	_ILGIFMTILL_					0	0	0		ENSG00000185201|ENST00000616316|IFITM2;ENST00000527146.1_2_11:308871-309162:+|nuORF;ENST00000505282.1_1_4:66959972-66960239:+|nuORF	ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.330078125	2	567.353771	1132.69299	0.48124	0.00027303	2.0867	0.0011839	2.5679	0.0014569	567.3548555265519	91.689	0.21614	91.911	91.763	91.979	0.22157					5	4	2	0	0	0	0.37624	1	9256	9256		10.866	3.6722	1	38683			17402	7687	11774	11783	20116	20116					0.13195051372736089
ILGIISTIYK	10	Unmodified	_ILGIISTIYK_					0	0	0		nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;ENSG00000148308|ENST00000372097|GTF3C5;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5	nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5	nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8565673828125	2	560.85245	1119.69035	2.9798	0.0016712	2.9618	0.0016611	5.9416	0.0033324	560.8538744091617	100.96	0.90861	100.9	100.58	101.49	-0.052116					51	21	4	0	0	0	0.86763	1	10969	10969		26.693	6.6961	1	279620			17403	4947	11775	11784	20117	20117					0.13528919239411152
ILGILKAVND	10	Unmodified	_ILGILKAVND_					0	0	0		nc|ENSG00000126217|O15068-5|MCF2L;nc|ENSG00000126217|O15068-4|MCF2L;nc|ENSG00000126217|O15068-3|MCF2L;nc|ENSG00000126217|O15068-2|MCF2L;nc|ENSG00000126217|O15068-6|MCF2L;nc|ENSG00000126217|O15068-8|MCF2L;nc|ENSG00000126217|O15068-10|MCF2L;ENSG00000126217|ENST00000535094|MCF2L;nc|ENSG00000126217|O15068|MCF2L	nc|ENSG00000126217|O15068-5|MCF2L	nc|ENSG00000126217|O15068-5|MCF2L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.3292236328125	2	528.326599	1054.63865	-0.58649	-0.00030986	2.674	0.0014128	2.0875	0.0011029	528.3276579583173	38.175	1.4774	38.125	37.761	39.239	-0.050369					28	18	2	0	0	0	0.37624	1	2753	2753		24.519	0	1	151170			17404	3445	11776	11785	20118	20118					0.11351175545519254
ILGIRFLDKLC	11	Unmodified	_ILGIRFLDKLC_					0	0	0		ENSG00000198081|ENST00000651870|ZBTB14	ENSG00000198081|ENST00000651870|ZBTB14	ENSG00000198081|ENST00000651870|ZBTB14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	645.884765625	2	645.883758	1289.75296	0.024153	1.56E-05	-0.49076	-0.00031697	-0.46661	-0.00030137	645.8835446839796	105.96	2.0275	105.96	105.37	107.4	0					122	46	3	0	0	0	0.72106	1	10979	10979		28.081	1.0342	1	1316900			17405	8234	11777	11786	20119	20119					0.11967742035972151
ILGITPITT	9	Unmodified	_ILGITPITT_					0	0	0			REV__nc|ENSG00000134287|P61204-2|ARF3	REV__nc|ENSG00000134287|P61204-2|ARF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7906799316406	2	464.789318	927.564084	-0.88537	-0.00041151	3.8254	0.001778	2.94	0.0013665	464.79098266785445	37.031	1.7451	36.978	35.836	37.581	-0.053558					86	38	3	0	0	0	0.7932	1	2432	2432		24.203	3.7209	1	298640	+		17406	29857	11778	11787	20120	20120					0.09740412734117854
ILGIVGDLI	9	Unmodified	_ILGIVGDLI_					0	0	0		ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.791259765625	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.7932	2	3944	3944;4069		26.796	2.5934	1	186860			17407	12549	11779	11788	20121;20122	20121					0.10984716596760791
ILGIVGDLI	9	Unmodified	_ILGIVGDLI_					0	0	0		ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79217529296875	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.69914	2	2827	2827;2837		40.573	1.7665	1	548640			17408	12549	11779	11788	20123;20124	20123					0.10984716596760791
ILGIVGDLI	9	Unmodified	_ILGIVGDLI_					0	0	0		ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79205322265625	2	456.791861	911.569169	0.19556	8.933E-05	2.7159	0.0012406	2.9114	0.0013299	456.79296638202106	38.11	0.49987	38.204	37.924	38.424	0.094318					45	16	3	0	0	0	0.78851	1	2216	2216		28.254	1.4582	1	1181300			17409	12549	11779	11788	20125	20125					0.10984716596760791
ILGIVGDLI	9	Unmodified	_ILGIVGDLI_					0	0	0		ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7918701171875	2	456.791861	911.569169	0.23747	0.00010847	2.1705	0.00099146	2.408	0.0010999	456.79269786067573	42.365	2.4539	42.43	41.781	44.235	0.065037					168	63	3	0	0	0	0.7932	1	2838	2838		25.45	1.2474	1	556840			17410	12549	11779	11788	20126	20126					0.10984716596760791
ILGIVGDLI	9	Unmodified	_ILGIVGDLI_					0	0	0		ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7922668457031	2	456.791861	911.569169	-0.051128	-2.3355E-05	1.9525	0.00089189	1.9014	0.00086853	456.79265367527273	40.074	1.5514	40.027	39.34	40.891	-0.04789					131	49	4	0	0	0	0.76996	1	2489	2489		33.516	1.5607	1	940180			17411	12549	11779	11788	20127	20127					0.10984716596760791
ILGIVGDLI	9	Unmodified	_ILGIVGDLI_					0	0	0		ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7896728515625	2	456.791861	911.569169	-0.092831	-4.2405E-05	1.6943	0.00077396	1.6015	0.00073156	456.792474958444	41.251	1.138	41.206	40.614	41.752	-0.045471					60	36	2	0	0	0	0.7932	1	2676	2676		19.36	0	1	309120			17412	12549	11779	11788	20128	20128					0.10984716596760791
ILGIVGDLI	9	Unmodified	_ILGIVGDLI_					0	0	0		ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.790771484375	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.7932	1	2823	2823		26.796	0	1	605230			17413	12549	11779	11788	20129	20129					0.10984716596760791
ILGIVGDLI	9	Unmodified	_ILGIVGDLI_					0	0	0		ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	ENST00000485162.5_1_3:123304534-123348409:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.78912353515625	2	456.791861	911.569169	-0.077665	-3.5477E-05	3.236	0.0014782	3.1584	0.0014427	456.79322700683537	35.356	1.7647	35.603	35.091	36.856	0.24769					159	44	4	0	0	0	0.7932	1	2867	2867		26.796	0	1	6766600			17414	12549	11779	11788	20130	20130					0.10984716596760791
ILGKCFES	8	Unmodified	_ILGKCFES_					0	0	0		ENSG00000171492|ENST00000337338|LRRC8D	ENSG00000171492|ENST00000337338|LRRC8D	ENSG00000171492|ENST00000337338|LRRC8D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2605895996094	2	448.730946	895.447339	-0.014352	-6.4401E-06	-2.9257	-0.0013129	-2.9401	-0.0013193	448.7292665640398	71.48	0.90703	72.028	71.575	72.482	0.54878					37	21	3	0	0	0	0.4196	1	7983	7983		38.806	0	1	150210			17415	6672	11780	11789	20131	20131					-0.004566487572560618
ILGKGPNL	8	Unmodified	_ILGKGPNL_					0	0	0		ENST00000420642.1_7:74765936-74789271:+|nuORF;nc|ENSG00000274523|Q96I51-3|RCC1L;ENSG00000274523|ENST00000610322|RCC1L	ENST00000420642.1_7:74765936-74789271:+|nuORF	ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7476806640625	2	406.255446	810.496338	-0.11422	-4.6402E-05	4.232	0.0017193	4.1178	0.0016729	406.25707644632683	53.691	3.9271	53.686	50.86	54.787	-0.0053711					179	109	2	0	0	0	0.4196	1	4683	4683		19.36	5.5846	1	198400			17416	8997	11781	11790	20132	20132					0.08351007593978466
ILGKGPNL	8	Unmodified	_ILGKGPNL_					0	0	0		ENST00000420642.1_7:74765936-74789271:+|nuORF;nc|ENSG00000274523|Q96I51-3|RCC1L;ENSG00000274523|ENST00000610322|RCC1L	ENST00000420642.1_7:74765936-74789271:+|nuORF	ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2562255859375	2	406.255446	810.496338	0.12581	5.111E-05	3.5587	0.0014458	3.6846	0.0014969	406.25676185595603	33.224	0.95024	33.334	33.07	34.021	0.10991					93	41	3	0	0	0	0.86288	1	1597	1597		26.796	2.5934	1	425420			17417	8997	11781	11790	20133	20133					0.08351007593978466
ILGKGPNL	8	Unmodified	_ILGKGPNL_					0	0	0		ENST00000420642.1_7:74765936-74789271:+|nuORF;nc|ENSG00000274523|Q96I51-3|RCC1L;ENSG00000274523|ENST00000610322|RCC1L	ENST00000420642.1_7:74765936-74789271:+|nuORF	ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2574157714844	2	406.255446	810.496338	0.27279	0.00011082	3.6804	0.0014952	3.9532	0.001606	406.25677816056157	49.48	2.6493	49.522	48.485	51.134	0.042236					135	72	3	0	0	0	0.81548	2	3826	3791;3826		35.201	5.3592	1	326490			17418	8997	11781	11790	20134;20135	20135					0.08351007593978466
ILGKGPNL	8	Unmodified	_ILGKGPNL_					0	0	0		ENST00000420642.1_7:74765936-74789271:+|nuORF;nc|ENSG00000274523|Q96I51-3|RCC1L;ENSG00000274523|ENST00000610322|RCC1L	ENST00000420642.1_7:74765936-74789271:+|nuORF	ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7292175292969	2	406.255446	810.496338	0.51375	0.00020871	3.123	0.0012687	3.6368	0.0014775	406.2565925683243	76.333	0.53754	76.466	76.172	76.709	0.13325					26	16	2	0	0	0	0.4196	1	7120	7120		4.3163	0	1	66331			17419	8997	11781	11790	20136	20136					0.08351007593978466
ILGKGPNL	8	Unmodified	_ILGKGPNL_					0	0	0		ENST00000420642.1_7:74765936-74789271:+|nuORF;nc|ENSG00000274523|Q96I51-3|RCC1L;ENSG00000274523|ENST00000610322|RCC1L	ENST00000420642.1_7:74765936-74789271:+|nuORF	ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.296630859375	2	406.255446	810.496338	0.1687	6.8536E-05	3.5924	0.0014594	3.7611	0.0015279	406.25679922293756	37.947	1.2965	38.041	37.701	38.997	0.094322					92	43	3	0	0	0	0.4196	1	2318	2318		20.482	0	1	251620			17420	8997	11781	11790	20137	20137					0.08351007593978466
ILGKGPNL	8	Unmodified	_ILGKGPNL_					0	0	0		ENST00000420642.1_7:74765936-74789271:+|nuORF;nc|ENSG00000274523|Q96I51-3|RCC1L;ENSG00000274523|ENST00000610322|RCC1L	ENST00000420642.1_7:74765936-74789271:+|nuORF	ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2572326660156	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.88915	1	3816	3816		35.201	9.7505	1	334920			17421	8997	11781	11790	20138	20138					0.08351007593978466
ILGKKKCHV	9	Unmodified	_ILGKKKCHV_					0	0	0		ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3175659179688	2	513.318054	1024.62156	-1.5202	-0.00078036	-1.5551	-0.00079825	-3.0753	-0.0015786	513.3171098240366	43.168	1.3566	43.168	42.754	44.111	0					83	32	4	0	0	0	0.64922	2	3008	3008;3019		44.117	10.601	1	698430			17422	10886	11782	11791	20139;20140	20139					0.11022976458730227
ILGKKKCHV	9	Unmodified	_ILGKKKCHV_					0	0	0		ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3182373046875	2	513.318054	1024.62156	-1.3651	-0.00070072	-1.0674	-0.00054794	-2.4325	-0.0012487	513.3175456130648	53.876	2.1608	53.876	52.509	54.67	0					97	64	3	0	0	0	0.77546	1	4506	4506		31.955	5.1588	1	276500			17423	10886	11782	11791	20141	20141					0.11022976458730227
ILGKKKCHV	9	Unmodified	_ILGKKKCHV_					0	0	0		ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3175659179688	2	513.318054	1024.62156	-1.338	-0.00068682	-0.7918	-0.00040645	-2.1298	-0.0010933	513.317527909064	55.758	0.98328	55.758	55.175	56.159	0					47	26	3	0	0	0	0.7932	1	4720	4720		18.324	0.95945	1	140760			17424	10886	11782	11791	20142	20142					0.11022976458730227
ILGKKKCHV	9	Unmodified	_ILGKKKCHV_					0	0	0		ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.318115234375	2	513.318054	1024.62156	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.488	1	53.483	52.983	53.983	-0.0053711								0	0	0	0.2969	1	4678	4678		31.955	2.8053	1				17425	10886	11782	11791	20143	20143					0.11022976458730227
ILGKKKCHV	9	Unmodified	_ILGKKKCHV_					0	0	0		ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3156127929688	2	513.318054	1024.62156	-0.40505	-0.00020792	-2.5402	-0.0013039	-2.9452	-0.0015118	513.3166290585863	43.201	1.1169	43.206	42.933	44.05	0.0057487					65	27	3	0	0	0	0.72402	1	2980	2980		38.806	3.6054	1	350060			17426	10886	11782	11791	20144	20144					0.11022976458730227
ILGKKKCHV	9	Unmodified	_ILGKKKCHV_					0	0	0		ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3165283203125	2	513.318054	1024.62156	0.29738	0.00015265	-3.262	-0.0016745	-2.9647	-0.0015218	513.3163353757171	43.153	1.1401	43.209	42.87	44.01	0.056744					71	27	3	0	0	0	0.7932	1	2963	2963		25.45	4.5032	1	375110			17427	10886	11782	11791	20145	20145					0.11022976458730227
ILGKKKCHV	9	Unmodified	_ILGKKKCHV_					0	0	0		ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3175659179688	2	513.318054	1024.62156	0.39077	0.00020059	-3.1482	-0.001616	-2.7575	-0.0014155	513.3164630994114	53.539	1.8096	53.62	52.959	54.769	0.081528					78	48	3	0	0	0	0.77546	1	4371	4371		31.955	2.8053	1	262680			17428	10886	11782	11791	20146	20146					0.11022976458730227
ILGKKKCHV	9	Unmodified	_ILGKKKCHV_					0	0	0		ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3176879882812	2	513.318054	1024.62156	0.017852	9.1639E-06	-2.9777	-0.0015285	-2.9599	-0.0015194	513.3163616040292	43.268	1.3862	43.218	42.749	44.135	-0.050312					74	33	3	0	0	0	0.7932	1	3024	3024		25.45	1.2474	1	383900			17429	10886	11782	11791	20147	20147					0.11022976458730227
ILGKKKCHV	9	Unmodified	_ILGKKKCHV_					0	0	0		ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.318603515625	2	513.318054	1024.62156	-0.40874	-0.00020981	-2.1086	-0.0010824	-2.5173	-0.0012922	513.3169683772445	55.191	1.5464	55.154	54.574	56.12	-0.036827					75	51	2	0	0	0	0.77546	1	4619	4619		31.955	4.0726	1	226240			17430	10886	11782	11791	20148	20148					0.11022976458730227
ILGKPCPKIKV	11	Unmodified	_ILGKPCPKIKV_					0	0	0		ENSG00000243543|ENST00000372670|WFDC6;nc|ENSG00000243543|Q9BQY6|WFDC6	ENSG00000243543|ENST00000372670|WFDC6	ENSG00000243543|ENST00000372670|WFDC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.3801879882812	2	598.383394	1194.75224	-2.4045	-0.0014388	-0.91448	-0.00054721	-3.319	-0.001986	598.3827122218626	40.848	1.3552	40.855	40.235	41.59	0.0065727					86	35	3	0	0	0	0.7342	1	2998	2998		25.574	0	1	583190			17431	8809	11783	11792	20149	20149					0.16264947386889617
ILGKPCPKIKV	11	Unmodified	_ILGKPCPKIKV_					0	0	0		ENSG00000243543|ENST00000372670|WFDC6;nc|ENSG00000243543|Q9BQY6|WFDC6	ENSG00000243543|ENST00000372670|WFDC6	ENSG00000243543|ENST00000372670|WFDC6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3819580078125	2	598.383394	1194.75224	-1.3037	-0.00078014	-1.3817	-0.00082676	-2.6854	-0.0016069	598.3824993551823	42.188	1.4901	42.602	42.2	43.69	0.4139					77	36	4	0	0	0	0.75495	1	3765	3765		20.947	4.2295	1	1524500			17432	8809	11783	11792	20150	20150					0.16264947386889617
ILGKRLLKDSP	11	Unmodified	_ILGKRLLKDSP_					0	0	0		ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	ENSG00000102313|ENST00000218436|ITIH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9327392578125	3	413.930962	1238.77106	0.21387	8.8526E-05	4.0224	0.001665	4.2363	0.0017535	413.93255960283653	42.979	1.989	43.044	42.116	44.105	0.065033					113	52	3	0	0	0	0.76892	1	2988	2988		17.833	0	1	432840			17433	1999	11784	11793	20151	20151					0.1612220028232514
ILGLEGPL	8	Unmodified	_ILGLEGPL_					0	0	0		ENST00000261797.6_1_5:149934528-149934657:+|nuORF	ENST00000261797.6_1_5:149934528-149934657:+|nuORF	ENST00000261797.6_1_5:149934528-149934657:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2484436035156	2	406.249829	810.485105	-1.8141	-0.00073698	-1.2967	-0.0005268	-3.1108	-0.0012638	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.81548	1	8861	8861		20.482	4.8456	1	42617000			17434	9415	11785	11794	20152	20152					0.07228185499855044
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7669677734375	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.78292	1	2235	2235		29.842	0	1	1649400			17435	2692	11786	11795	20153	20153					0.09792178253792372
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.76690673828125	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.403	1	42.374	41.874	42.874	-0.029461								0	0	0	0.2792	1	3164	3164		39.021	0	1				17436	2692	11786	11795	20154	20154					0.09792178253792372
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.26806640625	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.55559	1	2790	2790		49.211	6.7363	1	2097300			17437	2692	11786	11795	20155	20155					0.09792178253792372
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76708984375	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.72098	1	2491	2491		39.021	0	1	2034000			17438	2692	11786	11795	20156	20156					0.09792178253792372
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7665100097656	2	412.765646	823.516739	1.0742	0.00044338	1.0077	0.00041595	2.0819	0.00085933	412.7659693172007	40.207	1.4192	40.217	39.687	41.106	0.0092812					79	35	3	0	0	0	0.7932	1	2876	2876		21.702	2.3424	1	573960			17439	2692	11786	11795	20157	20157					0.09792178253792372
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76708984375	2	412.765646	823.516739	1.4126	0.00058306	1.8694	0.00077163	3.282	0.0013547	412.7662658707051	42.038	1.4358	42.042	41.461	42.897	0.003418					59	34	2	0	0	0	0.72098	3	3104	3104;3127;3151		39.021	9.18	1	683700			17440	2692	11786	11795	20158;20159;20160	20158					0.09792178253792372
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.766357421875	2	412.765646	823.516739	2.174	0.00089735	1.253	0.00051718	3.427	0.0014145	412.7665537729303	46.111	2.6089	46.107	45.012	47.621	-0.0041618					133	65	3	0	0	0	0.7932	1	3673	3673		21.702	0	1	603990			17441	2692	11786	11795	20161	20161					0.09792178253792372
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7667541503906	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.713	1	48.713	48.213	49.213	0.00016785								0	0	0	0.2792	1	4068	4068		39.021	9.18	1				17442	2692	11786	11795	20162	20162					0.09792178253792372
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.76654052734375	2	412.765646	823.516739	-1.9024	-0.00078523	4.0039	0.0016527	2.1015	0.00086745	412.7675544540149	40.173	1.81	40.179	39.296	41.106	0.0065002					141	57	4	0	0	0	0.55559	1	2526	2526		49.211	0	1	726100			17443	2692	11786	11795	20163	20163					0.09792178253792372
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.767578125	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.76	1	39.848	39.348	40.348	0.088375								0	0	0	0.30219	1	2466	2466		29.842	3.0454	1				17444	2692	11786	11795	20164	20164					0.09792178253792372
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7669372558594	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.72098	1	2114	2114		39.021	7.0666	1	1619400			17445	2692	11786	11795	20165	20165					0.09792178253792372
ILGLGIAAP	9	Unmodified	_ILGLGIAAP_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7664794921875	2	412.765646	823.516739	-0.21056	-8.6912E-05	2.569	0.0010604	2.3584	0.00097348	412.76685422643334	40.116	1.6377	40.068	39.082	40.719	-0.04789					115	51	3	0	0	0	0.55559	1	2525	2525		49.211	10.189	1	699640			17446	2692	11786	11795	20166	20166					0.09792178253792372
ILGLIIIVGP	10	Unmodified	_ILGLIIIVGP_					0	0	0		ENSG00000259224|ENST00000412468|SLC35G6;ENSG00000164729|ENST00000297307|SLC35G3;ENSG00000236396|ENST00000588001|SLC35G4	ENSG00000259224|ENST00000412468|SLC35G6	ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	504.3478698730469	2	504.346803	1006.67905	-0.88157	-0.00044462	3.4384	0.0017341	2.5568	0.0012895	504.34836264980135	37.732	1.4084	37.682	37.008	38.417	-0.050373					93	31	4	0	0	0	0.85108	1	2597	2597		19.36	0	1	910350			17447	5995	11787	11796	20167	20167					0.175981419359573
ILGLIIIVGP	10	Unmodified	_ILGLIIIVGP_					0	0	0		ENSG00000259224|ENST00000412468|SLC35G6;ENSG00000164729|ENST00000297307|SLC35G3;ENSG00000236396|ENST00000588001|SLC35G4	ENSG00000259224|ENST00000412468|SLC35G6	ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3481750488281	2	504.346803	1006.67905	0.33922	0.00017108	2.4867	0.0012542	2.8259	0.0014252	504.34787681468055	34.758	1.3281	34.968	34.604	35.932	0.21002					94	33	4	0	0	0	0.86786	1	2613	2613		26.796	0	1	1680800			17448	5995	11787	11796	20168	20168					0.175981419359573
ILGLISLDS	9	Unmodified	_ILGLISLDS_					0	0	0		ENSG00000243896|ENST00000641841|OR2A7;ENSG00000180658|ENST00000315453|OR2A4;ENSG00000221970|ENST00000641044|OR2A1;ENSG00000221933|ENST00000641663|OR2A25;ENSG00000212807|ENST00000641810|OR2A42	ENSG00000243896|ENST00000641841|OR2A7	ENSG00000243896|ENST00000641841|OR2A7	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77740478515625	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.639	1	80.579	80.079	81.079	-0.059692								0	0	0	0.29103	1	8110	8110		40.573	8.6178	1				17449	7339	11788	11797	20169	20169					0.07575822354476713
ILGLKRVT	8	Unmodified	_ILGLKRVT_					0	0	0		nc|ENSG00000177192|Q9Y606-2|PUS1;ENSG00000177192|ENST00000376649|PUS1	nc|ENSG00000177192|Q9Y606-2|PUS1	nc|ENSG00000177192|Q9Y606-2|PUS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27447509765625	2	450.30547	898.596387	-0.14128	-6.3618E-05	-1.2287	-0.00055329	-1.37	-0.00061691	450.3050933864063	93.576	0.4204	93.645	93.416	93.837	0.069595					12	9	2	0	0	0	0.4196	1	9747	9747		19.36	5.5846	1	76302			17450	7127	11789	11798	20170	20170					0.1430324492780528
ILGLKSPAKHK	11	Unmodified	_ILGLKSPAKHK_					0	0	0			REV__nc|ENSG00000164741|Q96QB1-6|DLC1	REV__nc|ENSG00000164741|Q96QB1-6|DLC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.7178344726562	2	596.38224	1190.74993	0.19544	0.00011656	2.2529	0.0013436	2.4483	0.0014601	596.3830064586224	23.03	0.16126	23.118	23.017	23.178	0.088015					11	7	2	0	0	0	0.17382	1	720	720		28.081	2.5074	1	59372	+		17451	29993	11790	11799	20171	20171					0.1621823497346213
ILGLLKPD	8	Unmodified	_ILGLLKPD_					0	0	0		ENSG00000129696|ENST00000431156|TTI2	ENSG00000129696|ENST00000431156|TTI2	ENSG00000129696|ENST00000431156|TTI2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25262451171875	2	434.778754	867.542954	0.58755	0.00025545	2.0144	0.00087583	2.602	0.0011313	434.7798073034647	83.766	1.2284	83.697	82.925	84.154	-0.069313					47	28	2	0	0	0	0.4196	1	8458	8458		25.45	0	1	57095			17452	3604	11791	11800	20172	20172					0.10388447425282266
ILGLLKPD	8	Unmodified	_ILGLLKPD_					0	0	0		ENSG00000129696|ENST00000431156|TTI2	ENSG00000129696|ENST00000431156|TTI2	ENSG00000129696|ENST00000431156|TTI2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2523498535156	2	434.778754	867.542954	0.44925	0.00019532	2.4096	0.0010477	2.8589	0.001243	434.7799125822789	82.186	1.6169	82.123	81.553	83.169	-0.062935					55	37	2	0	0	0	0.4196	1	8363	8363		21.96	0	1	91419			17453	3604	11791	11800	20173	20173					0.10388447425282266
ILGLLLLDS	9	Unmodified	_ILGLLLLDS_					0	0	0			REV__ENSG00000164081|ENST00000341333|TEX264	REV__ENSG00000164081|ENST00000341333|TEX264	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80584716796875	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.76996	1	2548	2548		33.516	6.7195	1	336090	+		17454	21028	11792	11801	20174	20174					0.11580985768239316
ILGLLLLDS	9	Unmodified	_ILGLLLLDS_					0	0	0			REV__ENSG00000164081|ENST00000341333|TEX264	REV__ENSG00000164081|ENST00000341333|TEX264	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8041687011719	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.495	1	42.465	41.965	42.965	-0.029461								0	0	0	0.29103	1	3177	3177		40.573	0	1		+		17455	21028	11792	11801	20175	20175					0.11580985768239316
ILGLLLLDS	9	Unmodified	_ILGLLLLDS_					0	0	0			REV__ENSG00000164081|ENST00000341333|TEX264	REV__ENSG00000164081|ENST00000341333|TEX264	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8064270019531	2	478.804968	955.595384	-2.1118	-0.0010111	4.0445	0.0019365	1.9327	0.00092538	478.8067215450766	42.623	1.2578	42.623	42.157	43.414	0.00016785					54	29	3	0	0	0	0.72402	1	3240	3240		38.806	6.8513	1	179530	+		17456	21028	11792	11801	20176	20176					0.11580985768239316
ILGLLLLLID	10	Unmodified	_ILGLLLLLID_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.37451171875	2	548.373018	1094.73148	-1.4498	-0.00079504	3.6321	0.0019917	2.1823	0.0011967	548.3748802153438	35.47	1.1138	35.47	34.867	35.98	0					77	29	3	0	0	0	0.84874	1	1945	1945		18.324	1.8513	1	301910	+		17457	22690	11793	11802	20177	20177					0.18790680278902983
ILGLLLLLID	10	Unmodified	_ILGLLLLLID_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3731689453125	2	548.373018	1094.73148	-0.47019	-0.00025784	2.7651	0.0015163	2.2949	0.0012584	548.3743331690392	35.442	1.0652	35.43	35	36.065	-0.012203					66	23	4	0	0	0	0.91594	1	2274	2274		6.7355	0.42289	1	555000	+		17458	22690	11793	11802	20178	20178					0.18790680278902983
ILGLLLLLID	10	Unmodified	_ILGLLLLLID_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3748168945312	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.85694	2	2477	2453;2477		24.203	10.449	1	314410	+		17459	22690	11793	11802	20179;20180	20180					0.18790680278902983
ILGLLLLLID	10	Unmodified	_ILGLLLLLID_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3744506835938	2	548.373018	1094.73148	-0.26655	-0.00014617	2.6931	0.0014768	2.4265	0.0013306	548.374310727377	37.412	2.4822	37.359	36.203	38.685	-0.053558					161	55	4	0	0	0	0.86201	3	2556	2449;2545;2556		29.15	6.1071	1	654980	+		17460	22690	11793	11802	20181;20182;20183	20183					0.18790680278902983
ILGLLLLLID	10	Unmodified	_ILGLLLLLID_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.37353515625	2	548.373018	1094.73148	-0.49859	-0.00027341	2.6391	0.0014472	2.1405	0.0011738	548.3742417671841	35.313	1.4945	35.32	34.937	36.431	0.0063896					91	33	3	0	0	0	0.85438	2	2204	2204;2215		24.203	4.9621	1	324130	+		17461	22690	11793	11802	20184;20185	20184					0.18790680278902983
ILGLLLLLID	10	Unmodified	_ILGLLLLLID_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.3743286132812	2	548.373018	1094.73148	-0.70765	-0.00038806	3.2315	0.0017721	2.5239	0.001384	548.3746520604317	37.865	1.0829	38.178	37.705	38.788	0.31312					67	27	3	0	0	0	0.88541	1	3077	3077		11.511	0	1	813450	+		17462	22690	11793	11802	20186	20186					0.18790680278902983
ILGLLLLLID	10	Unmodified	_ILGLLLLLID_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.3717041015625	2	548.373018	1094.73148	-2.3076	-0.0012654	3.2133	0.0017621	0.90573	0.00049668	548.3746487177506	40.091	1.0218	40.459	39.855	40.877	0.36797					58	25	3	0	0	0	0.86718	1	3401	3401		27.882	5.9224	1	1116500	+		17463	22690	11793	11802	20187	20187					0.18790680278902983
ILGLLLLLID	10	Unmodified	_ILGLLLLLID_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.8502197265625	2	548.373018	1094.73148	-2.3076	-0.0012654	3.2133	0.0017621	0.90573	0.00049668	548.3746487177506	40.091	1.0218	40.459	39.855	40.877	0.36797					58	25	3	0	0	0	0.37624	1	3447	3447		30.504	7.4612	1	1116500	+		17464	22690	11793	11802	20188	20188					0.18790680278902983
ILGLLLLLID	10	Unmodified	_ILGLLLLLID_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.8511962890625	2	548.373018	1094.73148	-1.4783	-0.00081067	1.703	0.0009339	0.22473	0.00012324	548.3738575793863	39.993	0.64837	40.583	40.26	40.908	0.58915					33	15	3	0	0	0	0.37624	1	3422	3422		20.947	0	1	779430	+		17465	22690	11793	11802	20189	20189					0.18790680278902983
ILGLLLLLID	10	Unmodified	_ILGLLLLLID_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	548.373018	1094.73148	-0.70765	-0.00038806	3.2315	0.0017721	2.5239	0.001384	548.3746520604317	37.865	1.0829	38.178	37.705	38.788	0.31312	-0.030576	0.00038381	NaN	11.511	67	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	813450	+		17466	22690	11793	11802							0.18790680278902983
ILGLLLLLID	10	Unmodified	_ILGLLLLLID_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	548.373018	1094.73148	0.058784	3.2236E-05	2.4348	0.0013352	2.4936	0.0013674	548.374158721672	37.729	1.047	38.239	37.77	38.817	0.5095	0.030576	-0.00049001	NaN	11.511	65	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	420830	+		17467	22690	11793	11802							0.18790680278902983
ILGLLLLYM	9	Unmodified	_ILGLLLLYM_					0	0	0		nc|ENSG00000175348|Q9NQ34-2|TMEM9B;ENSG00000175348|ENST00000534025|TMEM9B	nc|ENSG00000175348|Q9NQ34-2|TMEM9B	nc|ENSG00000175348|Q9NQ34-2|TMEM9B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8276977539062	2	524.827389	1047.64023	0.8139	0.00042716	-1.7535	-0.00092028	-0.93959	-0.00049312	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.78292	1	10473	10473		29.842	3.0454	1	27719000			17468	7011	11794	11803	20190	20190					0.11831093309933749
ILGLLPGTK	9	Unmodified	_ILGLLPGTK_					0	0	0		ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30108642578125	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.76402	1	1950	1950		35.201	0	1	1057300			17469	3126	11795	11804	20191	20191					0.1262842283366581
ILGLLPGTK	9	Unmodified	_ILGLLPGTK_					0	0	0		ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3017578125	2	456.299853	910.585153	0.24355	0.00011113	1.0535	0.0004807	1.297	0.00059184	456.30021098241764	43.255	2.3971	43.228	42.036	44.433	-0.026764					115	57	3	0	0	0	0.78983	1	3301	3301		27.882	1.0861	1	803600			17470	3126	11795	11804	20192	20192					0.1262842283366581
ILGLLPGTK	9	Unmodified	_ILGLLPGTK_					0	0	0		ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3001708984375	2	456.299853	910.585153	0.11809	5.3885E-05	2.2455	0.0010246	2.3636	0.0010785	456.3007564830729	46.759	1.8735	46.745	45.791	47.665	-0.013821					101	50	3	0	0	0	0.76255	1	3699	3699		35.618	2.1027	1	299420			17471	3126	11795	11804	20193	20193					0.1262842283366581
ILGLLPGTK	9	Unmodified	_ILGLLPGTK_					0	0	0		ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3009948730469	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.7932	1	2128	2128		24.203	1.1603	1	1715600			17472	3126	11795	11804	20194	20194					0.1262842283366581
ILGLLPGTK	9	Unmodified	_ILGLLPGTK_					0	0	0		ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3011779785156	2	456.299853	910.585153	-1.267	-0.00057813	4.2907	0.0019578	3.0237	0.0013797	456.3016565043114	33.346	1.5471	33.392	33.095	34.642	0.045853					160	67	4	0	0	0	0.77546	1	1609	1609		31.955	5.1588	1	1558600			17473	3126	11795	11804	20195	20195					0.1262842283366581
ILGLLPGTK	9	Unmodified	_ILGLLPGTK_					0	0	0		ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79302978515625	2	456.299853	910.585153	-1.2601	-0.00057498	3.6181	0.0016509	2.358	0.001076	456.3014859730957	38.196	1.5806	38.212	37.271	38.852	0.016567					59	47	2	0	0	0	0.20789	1	2312	2312		40.778	13.982	1	222130			17474	3126	11795	11804	20196	20196					0.1262842283366581
ILGLLPGTK	9	Unmodified	_ILGLLPGTK_					0	0	0		ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30120849609375	2	456.299853	910.585153	0.18552	8.4654E-05	2.8375	0.0012948	3.0231	0.0013794	456.3010022539405	33.29	1.7406	33.257	32.935	34.675	-0.032681					212	75	4	0	0	0	0.76996	1	1588	1588		33.516	0	1	1700700			17475	3126	11795	11804	20197	20197					0.1262842283366581
ILGLLSVSE	9	Unmodified	_ILGLLSVSE_					0	0	0			REV__ENSG00000204010|ENST00000371809|IFIT1B	REV__ENSG00000204010|ENST00000371809|IFIT1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7776184082031	2	465.778951	929.543348	-0.1189	-5.538E-05	-2.6882	-0.0012521	-2.8071	-0.0013075	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.78536	1	7882	7882		29.15	0.89528	1	345200	+		17476	23451	11796	11805	20198	20198					0.07575822354476713
ILGLQRSL	8	Unmodified	_ILGLQRSL_					0	0	0			REV__ENST00000567562.5_1_16:20814828-20817484:-|nuORF	REV__ENST00000567562.5_1_16:20814828-20817484:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2744140625	2	450.287277	898.560001	0.684	0.000308	-0.61688	-0.00027778	0.067116	3.0222E-05	450.28691363492703	92.933	0.73825	93.092	92.877	93.616	0.15874					38	17	3	0	0	0	0.4196	1	9481	9481		33.516	9.3128	1	296360	+		17477	28879	11797	11806	20199	20199					0.10666368031081674
ILGLSPIILI	10	Unmodified	_ILGLSPIILI_					0	0	0			REV__ENSG00000171944|ENST00000307388|OR52A5	REV__ENSG00000171944|ENST00000307388|OR52A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.361083984375	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.86147	1	2036	2036		33.516	6.7195	1	5020100	+		17478	21789	11798	11807	20200	20200					0.18194411107424457
ILGLSPIILI	10	Unmodified	_ILGLSPIILI_					0	0	0			REV__ENSG00000171944|ENST00000307388|OR52A5	REV__ENSG00000171944|ENST00000307388|OR52A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.36083984375	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.86201	1	2425	2425		24.203	5.8783	1	2706400	+		17479	21789	11798	11807	20201	20201					0.18194411107424457
ILGLSPIILI	10	Unmodified	_ILGLSPIILI_					0	0	0			REV__ENSG00000171944|ENST00000307388|OR52A5	REV__ENSG00000171944|ENST00000307388|OR52A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.358154296875	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.85438	1	1912	1912		16.473	4.2663	1	1497200	+		17480	21789	11798	11807	20202	20202					0.18194411107424457
ILGLSPIILI	10	Unmodified	_ILGLSPIILI_					0	0	0			REV__ENSG00000171944|ENST00000307388|OR52A5	REV__ENSG00000171944|ENST00000307388|OR52A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3612670898438	2	526.359911	1050.70527	0.76967	0.00040513	1.4348	0.00075522	2.2045	0.0011603	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.86305	2	2329	2329;2377		31.955	1.4512	1	7968500	+		17481	21789	11798	11807	20203;20204	20203					0.18194411107424457
ILGLSPIILI	10	Unmodified	_ILGLSPIILI_					0	0	0			REV__ENSG00000171944|ENST00000307388|OR52A5	REV__ENSG00000171944|ENST00000307388|OR52A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3613891601562	2	526.359911	1050.70527	1.1443	0.00060234	1.4578	0.00076731	2.6021	0.0013697	526.3605227402171	34.131	1.7657	34.341	33.942	35.708	0.21003					136	43	4	0	0	0	0.86147	1	2581	2581		33.516	1.5607	1	7568500	+		17482	21789	11798	11807	20205	20205					0.18194411107424457
ILGLSPVLA	9	Unmodified	_ILGLSPVLA_					0	0	0			REV__ENST00000393931.7_1_17:39911314-39911869:-|nuORF	REV__ENST00000393931.7_1_17:39911314-39911869:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78765869140625	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.74905	1	3025	3025		37.028	3.5129	1	12471000	+		17483	26069	11799	11808	20206	20206					0.11308733942314575
ILGLSPVLA	9	Unmodified	_ILGLSPVLA_					0	0	0			REV__ENST00000393931.7_1_17:39911314-39911869:-|nuORF	REV__ENST00000393931.7_1_17:39911314-39911869:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78790283203125	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.67235	1	2827	2827		42.474	8.9589	1	14534000	+		17484	26069	11799	11808	20207	20207					0.11308733942314575
ILGLSPVLA	9	Unmodified	_ILGLSPVLA_					0	0	0			REV__ENST00000393931.7_1_17:39911314-39911869:-|nuORF	REV__ENST00000393931.7_1_17:39911314-39911869:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78704833984375	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.64338	2	2675	2675;2810		44.531	6.3143	1	9571700	+		17485	26069	11799	11808	20208;20209	20208					0.11308733942314575
ILGLSPVLA	9	Unmodified	_ILGLSPVLA_					0	0	0			REV__ENST00000393931.7_1_17:39911314-39911869:-|nuORF	REV__ENST00000393931.7_1_17:39911314-39911869:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.785888671875	2	441.786579	881.558604	-2.6056	-0.0011511	3.8386	0.0016959	1.233	0.00054472	441.7881605091801	40.922	2.2099	41.314	40.796	43.006	0.39209					179	59	5	0	0	0	0.76402	1	3487	3487		35.201	5.3592	1	185320000	+		17486	26069	11799	11808	20210	20210					0.11308733942314575
ILGLSPVLA	9	Unmodified	_ILGLSPVLA_					0	0	0			REV__ENST00000393931.7_1_17:39911314-39911869:-|nuORF	REV__ENST00000393931.7_1_17:39911314-39911869:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7870178222656	2	441.786579	881.558604	-1.3207	-0.00058348	2.7134	0.0011988	1.3927	0.00061528	441.78767453164585	40.807	2.1151	41.396	40.908	43.023	0.58915					198	57	5	0	0	0	0.76402	1	3482	3482		35.201	1.6851	1	200250000	+		17487	26069	11799	11808	20211	20211					0.11308733942314575
ILGLSVALP	9	Unmodified	_ILGLSVALP_					0	0	0		ENST00000424321.5_1_2:105371685-105371811:-|nuORF	ENST00000424321.5_1_2:105371685-105371811:-|nuORF	ENST00000424321.5_1_2:105371685-105371811:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7876892089844	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.76996	1	3218	3218		33.516	0	1	12523000			17488	11512	11800	11809	20212	20212					0.11308733942325944
ILGLVFIFQFV	11	Unmodified	_ILGLVFIFQFV_					0	0	0		ENST00000550528.5_1_12:58133675-58140075:+|nuORF;ENST00000546993.5_1_12:58138937-58140584:+|nuORF;ENSG00000135452|ENST00000257910|TSPAN31	ENST00000550528.5_1_12:58133675-58140075:+|nuORF	ENST00000550528.5_1_12:58133675-58140075:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.5976867675781	3	432.59692	1294.76893	0.73472	0.00031784	1.9577	0.0008469	2.6924	0.0011647	432.59773549861245	107.06	1.3761	107.15	106.64	108.02	0.091263					138	33	6	0	0	0	0.77538	1	11447	11447		14.694	0	1	14015000			17489	4023	11801	11810	20213	20213					0.13333771544489537
ILGLVFIFQFV	11	Unmodified	_ILGLVFIFQFV_					0	0	0		ENST00000550528.5_1_12:58133675-58140075:+|nuORF;ENST00000546993.5_1_12:58138937-58140584:+|nuORF;ENSG00000135452|ENST00000257910|TSPAN31	ENST00000550528.5_1_12:58133675-58140075:+|nuORF	ENST00000550528.5_1_12:58133675-58140075:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3935546875	2	648.391742	1294.76893	-1.1411	-0.00073988	2.087	0.0013532	0.94594	0.00061334	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75921	1	12552	12552		19.997	2.6318	1	2297700			17490	4023	11801	11810	20214	20214					0.13333771544489537
ILGNGLVII	9	Unmodified	_ILGNGLVII_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.3010559082031	2	456.299853	910.585153	0.82269	0.00037539	2.1236	0.000969	2.9463	0.0013444	456.30067401982916	32.79	1.601	33.001	32.465	34.066	0.21168					118	37	4	0	0	0	0.7932	1	2313	2313		24.203	4.8428	1	2892400			17491	6949	11802	11811	20215	20215					0.1262842283365444
ILGNKKKDT	9	Unmodified	_ILGNKKKDT_					0	0	0		nc|ENSG00000104055|O43548-2|TGM5;ENSG00000104055|ENST00000220420|TGM5	nc|ENSG00000104055|O43548-2|TGM5	nc|ENSG00000104055|O43548-2|TGM5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.80633544921875	2	508.808574	1015.60259	0.94338	0.00048	-2.2339	-0.0011366	-1.2905	-0.00065661	508.8073543874404	89.499	0.84901	89.949	89.406	90.255	0.45058					38	21	2	0	0	0	0.78536	1	10540	10540		29.15	3.5755	1	1156600			17492	2110	11803	11812	20216	20216					0.09541718368666352
ILGNKLHRVG	10	Unmodified	_ILGNKLHRVG_					0	0	0			REV__ENSG00000104866|ENST00000221462|PPP1R37	REV__ENSG00000104866|ENST00000221462|PPP1R37	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.7752075195312	2	553.843282	1105.67201	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.563	1	68.691	68.191	69.191	0.12838								0	0	0	0.45132	1	6177	6177		21.96	1.9631	1		+		17493	17483	11804	11813	20217	20217					0.12340222108082344
ILGNSKLKQAS	11	Unmodified	_ILGNSKLKQAS_					0	0	0		ENSG00000121318|ENST00000240619|TAS2R10	ENSG00000121318|ENST00000240619|TAS2R10	ENSG00000121318|ENST00000240619|TAS2R10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	579.8440551757812	2	579.845687	1157.67682	-1.355	-0.00078567	-1.4577	-0.00084523	-2.8126	-0.0016309	579.8447437223629	102.17	1.0869	102.31	101.93	103.02	0.13569					79	26	4	0	0	0	0.732	1	10719	10719		26.063	0.48933	1	2038000			17494	3174	11805	11814	20218	20218					0.10429061460172306
ILGPAIGYVL	10	Unmodified	_ILGPAIGYVL_					0	0	0		ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7531433105469	2	508.312961	1014.61137	-0.46058	-0.00023412	2.6021	0.0013227	2.1415	0.0010886	508.3160070647356	63.813	0.17353	64.199	64.048	64.221	0.38681					5	3	2	0	0	0	0.37624	1	6864	6864		35.201	6.0512	1	21331			17495	6900	11806	11815	20219	20219					0.10464692005132292
ILGPGNIK	8	Unmodified	_ILGPGNIK_					0	0	0		ENSG00000138592|ENST00000307179|USP8	ENSG00000138592|ENST00000307179|USP8	ENSG00000138592|ENST00000307179|USP8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2573547363281	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.87276	1	3860	3860		29.842	0	1	334920			17496	4302	11807	11816	20220	20220					0.08351007593989834
ILGPGNIK	8	Unmodified	_ILGPGNIK_					0	0	0		ENSG00000138592|ENST00000307179|USP8	ENSG00000138592|ENST00000307179|USP8	ENSG00000138592|ENST00000307179|USP8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.91204833984375	2	406.255446	810.496338	1.0373	0.00042141	2.8477	0.0011569	3.885	0.0015783	406.2564994455701	37.831	1.0429	38.145	37.705	38.748	0.31312					44	26	2	0	0	0	0.4196	1	3015	3015		25.45	7.1258	1	824280			17497	4302	11807	11816	20221	20221					0.08351007593989834
ILGPGNIK	8	Unmodified	_ILGPGNIK_					0	0	0		ENSG00000138592|ENST00000307179|USP8	ENSG00000138592|ENST00000307179|USP8	ENSG00000138592|ENST00000307179|USP8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.91204833984375	2	406.255446	810.496338	1.5378	0.00062475	2.048	0.00083199	3.5858	0.0014567	406.2561908373926	36.658	1.1516	36.94	36.681	37.833	0.28173					48	27	2	0	0	0	0.4196	1	3015	3015		25.45	7.1258	1	460690			17498	4302	11807	11816	20222	20222					0.08351007593989834
ILGPGNIK	8	Unmodified	_ILGPGNIK_					0	0	0		ENSG00000138592|ENST00000307179|USP8	ENSG00000138592|ENST00000307179|USP8	ENSG00000138592|ENST00000307179|USP8	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.255446	810.496338	-1.9246	-0.00078187	4.9146	0.0019966	2.99	0.0012147	406.25718151058953	37.044	0.66103	37.044	36.822	37.483	0	0.058936	0.0021755	NaN	25.45	15	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23056			17499	4302	11807	11816							0.08351007593989834
ILGPILVVQGT	11	Unmodified	_ILGPILVVQGT_					0	0	0			REV__nc|ENSG00000105778|Q8NBF6-2|AVL9	REV__nc|ENSG00000105778|Q8NBF6-2|AVL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.35302734375	2	555.350074	1108.6856	1.3083	0.00072658	4.4118	0.0024501	5.7201	0.0031767	555.3524110053091	100.9	2.53	100.95	100.38	102.91	0.046356					182	60	5	0	0	0	0.76322	1	10859	10859		19.104	1.6355	1	5418400	+		17500	17569	11808	11817	20223	20223					0.13560035096679712
ILGPLEAGL	9	Unmodified	_ILGPLEAGL_					0	0	0		ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7695007324219	2	441.768386	881.522219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.929	1	65.053	64.553	65.553	0.12397								0	0	0	0.28877	1	5755	5755		35.201	6.0512	1				17501	3668	11809	11818	20224	20224					0.07671857045625075
ILGPLTADD	9	Unmodified	_ILGPLTADD_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.26409912109375	2	457.745108	913.475663	-1.2546	-0.00057429	-1.9874	-0.00090973	-3.242	-0.001484	457.7443205515647	81.57	0.32013	81.57	81.452	81.772	0					13	10	2	0	0	0	0.20789	1	7571	7571		21.96	9.0007	1	32134			17502	5333	11810	11819	20225	20225					0.015463724236610688
ILGPMLLNR	9	Unmodified	_ILGPMLLNR_					0	0	0		nc|ENSG00000187091|P51178-2|PLCD1;ENSG00000187091|ENST00000334661|PLCD1;ENST00000461445.5_1_3:38051140-38051556:-|nuORF	nc|ENSG00000187091|P51178-2|PLCD1	nc|ENSG00000187091|P51178-2|PLCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8079223632812	2	513.810062	1025.60557	-0.38907	-0.00019991	-1.6263	-0.0008356	-2.0153	-0.0010355	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.77546	1	3780	3780		31.955	1.4512	1	1358900			17503	7838	11811	11820	20226	20226					0.09379270221825209
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79541015625	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.82464	1	3696	3696		21.702	1.2205	1	1240000	+		17504	24004	11812	11821	20227	20227					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79510498046875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.369	1	59.369	58.869	59.869	0								0	0	0	0.29631	1	5161	5161		25.45	1.2474	1		+		17505	24004	11812	11821	20228	20228					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79559326171875	2	491.795269	981.575986	0.21767	0.00010705	0.41627	0.00020472	0.63394	0.00031177	491.79537288056144	45.526	1.3498	45.507	44.705	46.055	-0.018581					75	31	3	0	0	0	0.87276	1	3553	3553		29.842	0.69198	1	529090	+		17506	24004	11812	11821	20229	20229					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7974853515625	2	491.795269	981.575986	-0.080821	-3.9747E-05	1.1996	0.00058995	1.1188	0.0005502	491.7960401944478	66.981	1.1041	66.997	66.508	67.612	0.016197					82	51	2	0	0	0	0.88915	1	6304	6304		35.201	6.0512	1	81064	+		17507	24004	11812	11821	20230	20230					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7954406738281	2	491.795269	981.575986	-0.080814	-3.9744E-05	0.30498	0.00014999	0.22416	0.00011024	491.79531709994933	68.048	0.69823	68.069	67.673	68.371	0.021599					42	31	2	0	0	0	0.4196	1	6391	6391		20.482	0	1	60945	+		17508	24004	11812	11821	20231	20231					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7957763671875	2	491.795269	981.575986	-0.64291	-0.00031618	1.7291	0.00085035	1.0862	0.00053417	491.79609453871643	50.642	0.51759	50.619	50.252	50.77	-0.02343					22	13	2	0	0	0	0.86791	1	4380	4380		28.254	6.2944	1	333610	+		17509	24004	11812	11821	20232	20232					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7958068847656	2	491.795269	981.575986	-0.62954	-0.00030961	1.7556	0.00086339	1.126	0.00055378	491.79606037186466	51.204	1.5616	51.18	50.34	51.902	-0.02343					100	43	3	0	0	0	0.87276	1	4539	4539		29.842	1.5873	1	394140	+		17510	24004	11812	11821	20233	20233					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79541015625	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.81548	4	4584	4562;4584;4874;4937		33.516	4.366	1	792830	+		17511	24004	11812	11821	20234;20235;20236;20237	20235					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.795166015625	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.032	1	63.997	63.497	64.497	-0.034252								0	0	0	0.30004	1	6095	6095		21.702	1.2205	1		+		17512	24004	11812	11821	20238	20238					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7963562011719	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.845	1	59.878	59.378	60.378	0.032822								0	0	0	0.29199	1	5545	5545		29.842	4.3914	1		+		17513	24004	11812	11821	20239	20239					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957763671875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.226	1	60.325	59.825	60.825	0.098682								0	0	0	0.29353	1	5199	5199		28.254	0	1		+		17514	24004	11812	11821	20240	20240					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956237792969	2	491.795269	981.575986	0.29464	0.0001449	0.55726	0.00027406	0.8519	0.00041896	491.7954245147593	45.248	1.2335	45.291	44.693	45.927	0.042599					75	30	3	0	0	0	0.80706	1	3272	3272		19.36	0	1	440250	+		17515	24004	11812	11821	20241	20241					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79644775390625	2	491.795269	981.575986	-0.12437	-6.1163E-05	0.93789	0.00046125	0.81352	0.00040009	491.7955803973609	45.417	1.3583	45.348	44.556	45.914	-0.06863					81	33	3	0	0	0	0.88915	1	3225	3225		35.201	1.6851	1	439300	+		17516	24004	11812	11821	20242	20242					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958984375	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.86288	2	3854	3619;3854		35.201	3.2459	1	1502200	+		17517	24004	11812	11821	20243;20244	20244					0.08446074267999393
ILGPRQIW	8	Unmodified	_ILGPRQIW_					0	0	0			REV__ENSG00000274588|ENST00000611977|DGKK	REV__ENSG00000274588|ENST00000611977|DGKK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7918701171875	2	491.795269	981.575986	-0.78467	-0.0003859	1.4321	0.0007043	0.64743	0.0003184	491.7961077186052	63.812	0.83656	63.842	63.506	64.343	0.030247					49	34	2	0	0	0	0.86288	1	5623	5623		26.796	1.3459	1	86161	+		17518	24004	11812	11821	20245	20245					0.08446074267999393
ILGQVAVVL	9	Unmodified	_ILGQVAVVL_					0	0	0			REV__nc|ENSG00000007541|Q9BRB3|PIGQ	REV__nc|ENSG00000007541|Q9BRB3|PIGQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3010559082031	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.78058	1	2140	2140		30.504	3.7075	1	1715600	+		17519	29672	11813	11822	20246	20246					0.1262842283365444
ILGRGGRN	8	Unmodified	_ILGRGGRN_					0	0	0			REV__ENSG00000119203|ENST00000238112|CPSF3	REV__ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.75274658203125	2	421.751393	841.488233	0.52197	0.00022014	-0.4025	-0.00016975	0.11948	5.0389E-05	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.92973	1	7217	7217		50.025	5.9077	1	423780	+		17520	18342	11814	11823	20247	20247					0.06114873397245901
ILGRGLIHRE	10	Unmodified	_ILGRGLIHRE_					0	0	0		ENST00000567019.1_1_15:43489502-43501706:-|nuORF;nc|ENSG00000166947|P16452-3|EPB42;ENSG00000166947|ENST00000441366|EPB42;nc|ENSG00000166947|P16452-2|EPB42	ENST00000567019.1_1_15:43489502-43501706:-|nuORF	ENST00000567019.1_1_15:43489502-43501706:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3546752929688	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.49	1	114.47	113.97	114.97	-0.024452								0	0	0	0.45132	1	12686	12686		21.96	2.5999	1				17521	6252	11815	11824	20248	20248					0.11863607136797327
ILGRGLIHRE	10	Unmodified	_ILGRGLIHRE_					0	0	0		ENST00000567019.1_1_15:43489502-43501706:-|nuORF;nc|ENSG00000166947|P16452-3|EPB42;ENSG00000166947|ENST00000441366|EPB42;nc|ENSG00000166947|P16452-2|EPB42	ENST00000567019.1_1_15:43489502-43501706:-|nuORF	ENST00000567019.1_1_15:43489502-43501706:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3536987304688	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.9	1	117.88	117.38	118.38	-0.02433								0	0	0	0.45132	1	13058	13058		24.519	2.5593	1				17522	6252	11815	11824	20249	20249					0.11863607136797327
ILGRIPMNI	9	Unmodified	_ILGRIPMNI_					0	0	0		ENST00000406845.1_1_21:24463107-24463425:-|nuORF	ENST00000406845.1_1_21:24463107-24463425:-|nuORF	ENST00000406845.1_1_21:24463107-24463425:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8099975585938	2	513.810062	1025.60557	0.090876	4.6693E-05	-2.2226	-0.001142	-2.1317	-0.0010953	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.78058	1	4372	4372		30.504	2.2494	1	1448700			17523	11277	11816	11825	20250	20250					0.09379270221825209
ILGRIPMNI	9	Unmodified	_ILGRIPMNI_					0	0	0		ENST00000406845.1_1_21:24463107-24463425:-|nuORF	ENST00000406845.1_1_21:24463107-24463425:-|nuORF	ENST00000406845.1_1_21:24463107-24463425:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8102416992188	2	513.810062	1025.60557	0.36713	0.00018864	-2.2716	-0.0011671	-1.9044	-0.00097851	513.8088609518841	50.93	1.0953	50.98	50.541	51.637	0.049896					79	32	3	0	0	0	0.72402	1	4052	4052		38.806	1.647	1	394250			17524	11277	11816	11825	20251	20251					0.09379270221825209
ILGRIPMNI	9	Unmodified	_ILGRIPMNI_					0	0	0		ENST00000406845.1_1_21:24463107-24463425:-|nuORF	ENST00000406845.1_1_21:24463107-24463425:-|nuORF	ENST00000406845.1_1_21:24463107-24463425:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8086547851562	2	513.810062	1025.60557	0.37872	0.00019459	-2.5289	-0.0012994	-2.1502	-0.0011048	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.78058	1	4250	4250		30.504	2.6214	1	971720			17525	11277	11816	11825	20252	20252					0.09379270221825209
ILGRNHIH	8	Unmodified	_ILGRNHIH_					0	0	0		ENST00000399070.3_2_18:32886564-32887857:+|nuORF	ENST00000399070.3_2_18:32886564-32887857:+|nuORF	ENST00000399070.3_2_18:32886564-32887857:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.28094482421875	2	480.280318	958.546083	-0.79233	-0.00038054	1.9476	0.00093537	1.1552	0.00055483	480.2810198106101	99.29	1.2094	99.513	99.088	100.3	0.22262					43	28	2	0	0	0	0.86791	1	10343	10343		28.254	1.4582	1	316870			17526	11200	11817	11826	20253	20253					0.06515135322649712
ILGRRGKG	8	Unmodified	_ILGRRGKG_					0	0	0			REV__ENSG00000160190|ENST00000352133|SLC37A1	REV__ENSG00000160190|ENST00000352133|SLC37A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2615966796875	2	428.777411	855.540269	1.4289	0.00061267	-3.795	-0.0016272	-2.3662	-0.0010146	428.77569349625037	91.044	0.35624	90.977	90.839	91.196	-0.067085					10	8	2	0	0	0	0.4196	1	9592	9592		8.8223	0	1	213080	+		17527	20698	11818	11827	20254	20254					0.10672036811001817
ILGSFYFEKI	10	Unmodified	_ILGSFYFEKI_					0	0	0			REV__ENST00000373242.6_1_10:71912167-71912221:-|nuORF	REV__ENST00000373242.6_1_10:71912167-71912221:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.83349609375	2	608.834257	1215.65396	5.8969	0.0035902	-0.48027	-0.00029241	5.4166	0.0032978	608.8338483742878	110.97	0.68941	111.02	110.65	111.33	0.049088					52	27	4	0	0	0	0.85958	1	13490	13490		15.642	0	1	202050	+		17528	25756	11819	11828	20255	20255					0.0547604234272967
ILGSILLPS	9	Unmodified	_ILGSILLPS_					0	0	0		ENST00000510738.2_1_12:19413894-19459437:+|nuORF;nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;chr12:19237034-19253940|23|17.17|0.17|6.62|+|ENST00000536974|PLEKHA5,PLEKHA5;nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;nc|ENSG00000052126|Q9HAU0|PLEKHA5;nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;ENSG00000052126|ENST00000429027|PLEKHA5	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7921142578125	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.7932	1	2964	2964		24.203	0	1	759950			17529	125	11820	11829	20256	20256					0.10984716596760791
ILGSILLPS	9	Unmodified	_ILGSILLPS_					0	0	0		ENST00000510738.2_1_12:19413894-19459437:+|nuORF;nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;chr12:19237034-19253940|23|17.17|0.17|6.62|+|ENST00000536974|PLEKHA5,PLEKHA5;nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;nc|ENSG00000052126|Q9HAU0|PLEKHA5;nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;ENSG00000052126|ENST00000429027|PLEKHA5	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.79290771484375	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.72402	1	4049	4049		38.806	0	1	186860			17530	125	11820	11829	20257	20257					0.10984716596760791
ILGSILLPS	9	Unmodified	_ILGSILLPS_					0	0	0		ENST00000510738.2_1_12:19413894-19459437:+|nuORF;nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;chr12:19237034-19253940|23|17.17|0.17|6.62|+|ENST00000536974|PLEKHA5,PLEKHA5;nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;nc|ENSG00000052126|Q9HAU0|PLEKHA5;nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;ENSG00000052126|ENST00000429027|PLEKHA5	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7928161621094	2	456.791861	911.569169	0.098314	4.4909E-05	2.1756	0.00099381	2.2739	0.0010387	456.7927048221665	47.508	0.79892	47.499	46.87	47.669	-0.0093231					36	22	2	0	0	0	0.72402	1	3879	3879		38.806	5.2906	1	143320			17531	125	11820	11829	20258	20258					0.10984716596760791
ILGSILLPS	9	Unmodified	_ILGSILLPS_					0	0	0		ENST00000510738.2_1_12:19413894-19459437:+|nuORF;nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;chr12:19237034-19253940|23|17.17|0.17|6.62|+|ENST00000536974|PLEKHA5,PLEKHA5;nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;nc|ENSG00000052126|Q9HAU0|PLEKHA5;nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;ENSG00000052126|ENST00000429027|PLEKHA5	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79254150390625	2	456.791861	911.569169	-1.4626	-0.0006681	4.253	0.0019428	2.7904	0.0012746	456.7937012430135	38.803	1.6993	38.814	37.946	39.646	0.011173					92	39	3	0	0	0	0.74721	1	2732	2732		37.159	5.2042	1	2267400			17532	125	11820	11829	20259	20259					0.10984716596760791
ILGSILLPS	9	Unmodified	_ILGSILLPS_					0	0	0		ENST00000510738.2_1_12:19413894-19459437:+|nuORF;nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;chr12:19237034-19253940|23|17.17|0.17|6.62|+|ENST00000536974|PLEKHA5,PLEKHA5;nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;nc|ENSG00000052126|Q9HAU0|PLEKHA5;nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;ENSG00000052126|ENST00000429027|PLEKHA5	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7864990234375	2	456.791861	911.569169	-1.2294	-0.00056156	2.5606	0.0011697	1.3313	0.00060812	456.79289004576646	40.059	1.2176	40.068	39.557	40.774	0.0092773					97	29	4	0	0	0	0.7932	1	2927	2927		25.45	0	1	1129600			17533	125	11820	11829	20260	20260					0.10984716596760791
ILGSILLPS	9	Unmodified	_ILGSILLPS_					0	0	0		ENST00000510738.2_1_12:19413894-19459437:+|nuORF;nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;chr12:19237034-19253940|23|17.17|0.17|6.62|+|ENST00000536974|PLEKHA5,PLEKHA5;nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;nc|ENSG00000052126|Q9HAU0|PLEKHA5;nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;ENSG00000052126|ENST00000429027|PLEKHA5	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7917785644531	2	456.791861	911.569169	0.05486	2.506E-05	2.6152	0.0011946	2.6701	0.0012197	456.79295826454774	49.784	2.1713	49.788	48.709	50.88	0.0035973					85	53	2	0	0	0	0.7932	1	4267	4267		24.203	1.1603	1	208660			17534	125	11820	11829	20261	20261					0.10984716596760791
ILGSILLPS	9	Unmodified	_ILGSILLPS_					0	0	0		ENST00000510738.2_1_12:19413894-19459437:+|nuORF;nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;chr12:19237034-19253940|23|17.17|0.17|6.62|+|ENST00000536974|PLEKHA5,PLEKHA5;nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;nc|ENSG00000052126|Q9HAU0|PLEKHA5;nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;ENSG00000052126|ENST00000429027|PLEKHA5	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	ENST00000510738.2_1_12:19413894-19459437:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7909240722656	2	456.791861	911.569169	-1.2455	-0.00056893	2.9854	0.0013637	1.7399	0.00079477	456.79309475807366	41.513	1.1362	41.517	40.891	42.027	0.0043983					69	33	3	0	0	0	0.72402	1	2742	2742		38.806	1.647	1	293920			17535	125	11820	11829	20262	20262					0.10984716596760791
ILGSSKVGKTA	11	Unmodified	_ILGSSKVGKTA_					0	0	0		nc|ENSG00000108551|Q9Y272-2|RASD1;ENSG00000108551|ENST00000225688|RASD1	nc|ENSG00000108551|Q9Y272-2|RASD1	nc|ENSG00000108551|Q9Y272-2|RASD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.8207397460938	2	530.821681	1059.62881	1.1117	0.00059012	-2.5221	-0.0013388	-1.4104	-0.00074865	530.8202358745281	82.61	1.5277	82.544	82.018	83.546	-0.066185					83	35	4	0	0	0	0.62614	1	8386	8386		41.427	12.277	1	1339600			17536	2415	11821	11830	20263	20263					0.10137987540156246
ILGSSKVGKTA	11	Unmodified	_ILGSSKVGKTA_					0	0	0		nc|ENSG00000108551|Q9Y272-2|RASD1;ENSG00000108551|ENST00000225688|RASD1	nc|ENSG00000108551|Q9Y272-2|RASD1	nc|ENSG00000108551|Q9Y272-2|RASD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8206787109375	2	530.821681	1059.62881	-0.074689	-3.9646E-05	-1.2098	-0.00064217	-1.2845	-0.00068182	530.8208962267565	82.295	1.0035	82.45	81.96	82.964	0.15474					78	23	4	0	0	0	0.66009	1	7909	7909		37.508	3.3356	1	1979200			17537	2415	11821	11830	20264	20264					0.10137987540156246
ILGSWSIKK	9	Unmodified	_ILGSWSIKK_					0	0	0			REV__ENST00000354807.7_1_1:220240717-220246211:-|nuORF	REV__ENST00000354807.7_1_1:220240717-220246211:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3135375976562	2	516.316035	1030.61752	-0.25799	-0.00013321	-4.1781	-0.0021572	-4.4361	-0.0022904	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.69914	1	10634	10634		40.573	10.069	1	82226000	+		17538	25363	11822	11831	20265	20265					0.10343210236646883
ILGTGCCPFL	10	Unmodified	_ILGTGCCPFL_					0	0	0		nc|ENSG00000157693|Q5VZI3-2|TMEM268;ENSG00000157693|ENST00000288502|TMEM268;nc|ENSG00000157693|Q5VZI3-3|TMEM268	nc|ENSG00000157693|Q5VZI3-2|TMEM268	nc|ENSG00000157693|Q5VZI3-2|TMEM268	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.2535400390625	2	512.253731	1022.49291	0.39694	0.00020333	-0.13756	-7.0465E-05	0.25938	0.00013287	512.2534945513374	54.386	1.4462	54.467	54.003	55.449	0.081524					65	38	3	0	0	0	0.84112	1	4522	4522		37.159	0.13063	1	633090			17539	5446	11823	11832	20266	20266					-0.017437465665466334
ILGTKIFYQKL	11	Unmodified	_ILGTKIFYQKL_					0	0	0			REV__ENST00000471417.5_1_1:87599943-87600129:+|nuORF	REV__ENST00000471417.5_1_1:87599943-87600129:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2742919921875	3	441.939346	1322.79621	-1.4729	-0.00065094	2.5119	0.0011101	1.0389	0.00045915	441.94033054697593	56.641	1.0598	56.713	56.56	57.62	0.071835					108	50	3	0	0	0	0.77205	1	4820	4820		17.167	0	1	756750	+		17540	27229	11824	11833	20267	20267					0.1477225508488118
ILGVANLIV	9	Unmodified	_ILGVANLIV_					0	0	0		nc|ENSG00000177058|Q8NBW4-4|SLC38A9;nc|ENSG00000177058|Q8NBW4-3|SLC38A9;ENSG00000177058|ENST00000396865|SLC38A9;ENST00000515159.5_1_5:54922324-54929566:-|nuORF	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.2973937988281	2	456.299853	910.585153	0.11124	5.0758E-05	2.4046	0.0010972	2.5159	0.001148	456.3008660757633	48.327	3.035	48.325	47.755	50.79	-0.002449					136	76	2	0	0	0	0.77546	1	3970	3970		31.955	1.4512	1	254750			17541	7116	11825	11834	20268	20268					0.1262842283366581
ILGVCIYV	8	Unmodified	_ILGVCIYV_					0	0	0		nc|ENSG00000100242|Q9UH99-3|SUN2;ENST00000405510.5_2_22:39131979-39132159:-|nuORF	nc|ENSG00000100242|Q9UH99-3|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.2557373046875	2	440.254057	878.493561	0.13015	5.7301E-05	2.6771	0.0011786	2.8072	0.0012359	440.2551148846597	60.577	0.73638	60.608	60.275	61.012	0.0312					48	22	3	0	0	0	0.91333	1	5657	5657		43.626	10.133	1	201780			17542	14812	11826	11835	20269	20269					0.049454161448238665
ILGVIAIN	8	Unmodified	_ILGVIAIN_					0	0	0			REV__ENSG00000145536|ENST00000274181|ADAMTS16	REV__ENSG00000145536|ENST00000274181|ADAMTS16	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78533935546875	2	406.765646	811.516739	1.5542	0.0006322	0.95702	0.00038928	2.5112	0.0010215	406.76667522597353	33.522	0.33715	33.692	33.484	33.821	0.16971					9	7	2	0	0	0	0.4196	1	2425	2425		46.766	0	1	74911	+		17543	19951	11827	11836	20270	20270					0.10344178253797054
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79302978515625	2	456.791861	911.569169	0.10619	4.8505E-05	2.6551	0.0012128	2.7613	0.0012614	456.7929673289598	38.995	1.2001	38.965	38.494	39.694	-0.03027					96	27	4	0	0	0	0.76996	1	2685	2685		33.516	1.5607	1	2198500			17544	5200	11828	11837	20271	20271					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79315185546875	2	456.791861	911.569169	-1.0391	-0.00047467	3.9273	0.001794	2.8882	0.0013193	456.79357477476594	37.792	1.0999	37.741	37.317	38.417	-0.050373					69	24	4	0	0	0	0.67235	1	2579	2579		42.474	3.6683	1	2264600			17545	5200	11828	11837	20272	20272					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7929992675781	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.77546	1	2095	2095		31.955	1.4512	1	3484100			17546	5200	11828	11837	20273	20273					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7923583984375	2	456.791861	911.569169	-1.2516	-0.0005717	4.1535	0.0018973	2.9019	0.0013256	456.7936304493402	37.846	1.122	37.863	37.475	38.597	0.016563					101	34	4	0	0	0	0.5393	1	2237	2237		50.025	5.9077	1	1324300			17547	5200	11828	11837	20274	20274					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7900390625	2	456.791861	911.569169	-1.2455	-0.00056893	2.9854	0.0013637	1.7399	0.00079477	456.79309475807366	41.513	1.1362	41.517	40.891	42.027	0.0043983					69	33	3	0	0	0	0.7932	1	2692	2692		19.36	0	1	293920			17548	5200	11828	11837	20275	20275					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79315185546875	2	456.791861	911.569169	0.17991	8.2183E-05	2.7362	0.0012499	2.9161	0.001332	456.7930101461281	36.153	2.2506	36.256	35.136	37.386	0.10306					210	68	4	0	0	0	0.7932	1	2056	2056		25.45	0	1	3531000			17549	5200	11828	11837	20276	20276					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7911376953125	2	456.791861	911.569169	0.20144	9.2015E-05	2.7795	0.0012696	2.9809	0.0013616	456.79301419254114	38.74	1.332	38.834	38.396	39.728	0.094318					137	38	4	0	0	0	0.7932	1	2379	2379		13.775	0.81615	1	1693200			17550	5200	11828	11837	20277	20277					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7922668457031	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.7932	1	2101	2101		25.45	0	1	3452400			17551	5200	11828	11837	20278	20278					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79290771484375	2	456.791861	911.569169	-0.0055701	-2.5444E-06	2.9863	0.0013641	2.9807	0.0013616	456.7931079883192	38.776	1.3461	38.723	38.257	39.603	-0.052731					134	39	4	0	0	0	0.7932	1	2278	2278		19.36	1.0356	1	1653300			17552	5200	11828	11837	20279	20279					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79095458984375	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.69914	1	2865	2865		40.573	0	1	605230			17553	5200	11828	11837	20280	20280					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7925109863281	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.129	1	38.071	37.571	38.571	-0.057915								0	0	0	0.31088	1	2233	2233		26.796	0	1				17554	5200	11828	11837	20281	20281					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7930603027344	2	456.791861	911.569169	-0.5708	-0.00026074	3.3989	0.0015526	2.8281	0.0012919	456.79332762585267	37.831	1.4155	38.144	37.663	39.079	0.31312					135	35	5	0	0	0	0.69914	2	3062	3062;3076		40.573	8.6178	1	9282000			17555	5200	11828	11837	20282;20283	20282					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79278564453125	2	456.791861	911.569169	-2.1986	-0.0010043	3.4286	0.0015662	1.23	0.00056186	456.7933193778514	39.928	2.2	40.296	39.048	41.248	0.36797					193	55	5	0	0	0	0.7932	1	3392	3392		25.45	0	1	10973000			17556	5200	11828	11837	20284	20284					0.1098471659677216
ILGVIDIIG	9	Unmodified	_ILGVIDIIG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79150390625	2	456.791861	911.569169	0.90302	0.00041249	1.9801	0.00090447	2.8831	0.001317	456.792654311578	37.107	0.83018	37.593	36.916	37.747	0.48581					79	19	5	0	0	0	0.7932	1	2915	2915		26.796	7.4361	1	4180400			17557	5200	11828	11837	20285	20285					0.1098471659677216
ILGVILFLRLT	11	Unmodified	_ILGVILFLRLT_					0	0	0		nc|ENSG00000113504|Q9Y666-2|SLC12A7;ENSG00000113504|ENST00000264930|SLC12A7	nc|ENSG00000113504|Q9Y666-2|SLC12A7	nc|ENSG00000113504|Q9Y666-2|SLC12A7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.78173828125	3	419.947953	1256.82203	-0.68858	-0.00028917	-3.782	-0.0015882	-4.4706	-0.0018774	419.94730065997976	54.337	0.20962	54.288	54.149	54.358	-0.049271					10	6	2	0	0	0	0.17811	1	4485	4485		10.104	0	1	62642			17558	2725	11829	11838	20286	20286					0.2038914932716125
ILGVLGGAIV	10	Unmodified	_ILGVLGGAIV_					0	0	0			REV__ENSG00000115884|ENST00000254351|SDC1	REV__ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30059814453125	2	456.299853	910.585153	-1.7927	-0.00081802	3.97	0.0018115	2.1773	0.00099349	456.30151188064457	45.052	1.9056	45.052	44.154	46.06	0					117	46	3	0	0	0	0.85976	1	3336	3336		35.201	3.2459	1	498210	+		17559	18158	11830	11839	20287	20287					0.1262842283366581
ILGVLGGAIV	10	Unmodified	_ILGVLGGAIV_					0	0	0			REV__ENSG00000115884|ENST00000254351|SDC1	REV__ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3012390136719	2	456.299853	910.585153	-1.704	-0.00077753	4.2277	0.0019291	2.5237	0.0011516	456.30169392329583	51.067	1.2916	51.067	50.539	51.831	0					52	33	2	0	0	0	0.85976	1	4152	4152		35.201	1.0282	1	76610	+		17560	18158	11830	11839	20288	20288					0.1262842283366581
ILGVLGGAIV	10	Unmodified	_ILGVLGGAIV_					0	0	0			REV__ENSG00000115884|ENST00000254351|SDC1	REV__ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3011169433594	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.86786	2	1971	1971;2014		26.796	2.2921	1	1057300	+		17561	18158	11830	11839	20289;20290	20289					0.1262842283366581
ILGVLGGAIV	10	Unmodified	_ILGVLGGAIV_					0	0	0			REV__ENSG00000115884|ENST00000254351|SDC1	REV__ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3008728027344	2	456.299853	910.585153	0.17352	7.9178E-05	1.8885	0.00086173	2.062	0.00094091	456.30054777495894	45.254	1.9566	45.236	44.141	46.098	-0.018585					90	45	3	0	0	0	0.86786	1	3560	3560		26.796	1.3459	1	417410	+		17562	18158	11830	11839	20291	20291					0.1262842283366581
ILGVLGGAIV	10	Unmodified	_ILGVLGGAIV_					0	0	0			REV__ENSG00000115884|ENST00000254351|SDC1	REV__ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.301025390625	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.86786	1	1951	1951		26.796	2.5934	1	1220600	+		17563	18158	11830	11839	20292	20292					0.1262842283366581
ILGVLGGAIV	10	Unmodified	_ILGVLGGAIV_					0	0	0			REV__ENSG00000115884|ENST00000254351|SDC1	REV__ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30108642578125	2	456.299853	910.585153	-0.75416	-0.00034412	3.5877	0.0016371	2.8336	0.001293	456.3012900851617	35.065	1.7041	35.071	34.727	36.431	0.0063934					112	39	4	0	0	0	0.86786	2	2172	2172;2203		26.796	0	1	634200	+		17564	18158	11830	11839	20293;20294	20293					0.1262842283366581
ILGVLGGAIV	10	Unmodified	_ILGVLGGAIV_					0	0	0			REV__ENSG00000115884|ENST00000254351|SDC1	REV__ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30206298828125	2	456.299853	910.585153	-0.57201	-0.00026101	1.7645	0.00080516	1.1925	0.00054415	456.30048255320696	43.187	1.813	43.187	42.808	44.621	0.00016785					104	43	4	0	0	0	0.86786	1	3338	3338		26.796	1.3459	1	672310	+		17565	18158	11830	11839	20295	20295					0.1262842283366581
ILGVLGGAIV	10	Unmodified	_ILGVLGGAIV_					0	0	0			REV__ENSG00000115884|ENST00000254351|SDC1	REV__ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3003234863281	2	456.299853	910.585153	-1.267	-0.00057813	4.2907	0.0019578	3.0237	0.0013797	456.3016565043114	33.346	1.5471	33.392	33.095	34.642	0.045853					160	67	4	0	0	0	0.86786	1	1588	1588		26.796	1.3459	1	1558600	+		17566	18158	11830	11839	20296	20296					0.1262842283366581
ILGVLGGAIV	10	Unmodified	_ILGVLGGAIV_					0	0	0			REV__ENSG00000115884|ENST00000254351|SDC1	REV__ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3009033203125	2	456.299853	910.585153	-1.2643	-0.00057689	4.2328	0.0019314	2.9685	0.0013545	456.30161744594176	35.005	1.68	35.044	34.605	36.285	0.038643					125	54	3	0	0	0	0.85108	1	1786	1786		19.36	0	1	565550	+		17567	18158	11830	11839	20297	20297					0.1262842283366581
ILGVLGGAIV	10	Unmodified	_ILGVLGGAIV_					0	0	0			REV__ENSG00000115884|ENST00000254351|SDC1	REV__ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30133056640625	2	456.299853	910.585153	0.12298	5.6116E-05	2.7993	0.0012773	2.9223	0.0013334	456.30098509136985	34.994	1.698	34.939	34.615	36.313	-0.055149					136	59	3	0	0	0	0.85976	1	1862	1862		35.201	1.6851	1	657240	+		17568	18158	11830	11839	20298	20298					0.1262842283366581
ILGVLGGAIV	10	Unmodified	_ILGVLGGAIV_					0	0	0			REV__ENSG00000115884|ENST00000254351|SDC1	REV__ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30133056640625	2	456.299853	910.585153	0.82269	0.00037539	2.1236	0.000969	2.9463	0.0013444	456.30067401982916	32.79	1.601	33.001	32.465	34.066	0.21168					118	37	4	0	0	0	0.86786	1	2411	2411		26.796	0	1	2892400	+		17569	18158	11830	11839	20299	20299					0.1262842283366581
ILGVPLAETL	10	Unmodified	_ILGVPLAETL_					0	0	0			REV__nc|ENSG00000048392|Q7LG56-3|RRM2B	REV__nc|ENSG00000048392|Q7LG56-3|RRM2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3164672851562	2	513.3157	1024.61685	-1.3651	-0.00070072	3.5186	0.0018062	2.1536	0.0011055	513.3175456130648	53.876	2.1608	53.876	52.509	54.67	0					97	64	3	0	0	0	0.8488	1	4538	4538		17.365	0	1	276500	+		17570	16364	11831	11840	20300	20300					0.10552370796949617
ILGVPLAETL	10	Unmodified	_ILGVPLAETL_					0	0	0			REV__nc|ENSG00000048392|Q7LG56-3|RRM2B	REV__nc|ENSG00000048392|Q7LG56-3|RRM2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3175659179688	2	513.3157	1024.61685	-0.38471	-0.00019748	2.4513	0.0012583	2.0666	0.0010608	513.3169360200682	55.22	1.0911	55.284	54.878	55.969	0.063721					55	37	2	0	0	0	0.86452	1	4599	4599		30.504	0	1	243480	+		17571	16364	11831	11840	20301	20301					0.10552370796949617
ILGVPLAETL	10	Unmodified	_ILGVPLAETL_					0	0	0			REV__nc|ENSG00000048392|Q7LG56-3|RRM2B	REV__nc|ENSG00000048392|Q7LG56-3|RRM2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.317626953125	2	513.3157	1024.61685	0.29738	0.00015265	1.324	0.00067964	1.6214	0.00083229	513.3163353757171	43.153	1.1401	43.209	42.87	44.01	0.056744					71	27	3	0	0	0	0.85694	1	3001	3001		21.96	1.013	1	375110	+		17572	16364	11831	11840	20302	20302					0.10552370796949617
ILGVPLAETL	10	Unmodified	_ILGVPLAETL_					0	0	0			REV__nc|ENSG00000048392|Q7LG56-3|RRM2B	REV__nc|ENSG00000048392|Q7LG56-3|RRM2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3182983398438	2	513.3157	1024.61685	-0.34905	-0.00017917	2.3674	0.0012152	2.0183	0.001036	513.8184615031363	53.608	1.3919	53.546	53.049	54.441	-0.062065					64	37	3	0	0	0	0.74274	1	4373	4373		42.396	6.7778	1	277190	+		17573	16364	11831	11840	20303	20303					0.10552370796949617
ILGVPNKA	8	Unmodified	_ILGVPNKA_					0	0	0			REV__ENSG00000169814|ENST00000643237|BTD	REV__ENSG00000169814|ENST00000643237|BTD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2579650878906	2	406.255446	810.496338	-0.029064	-1.1807E-05	3.7836	0.0015371	3.7546	0.0015253	406.2568941466039	49.248	2.932	49.245	47.93	50.862	-0.0031128					122	73	3	0	0	0	0.86288	1	4048	4048		26.796	0	1	274920	+		17574	21604	11832	11841	20304	20304					0.08351007593989834
ILGVPNKA	8	Unmodified	_ILGVPNKA_					0	0	0			REV__ENSG00000169814|ENST00000643237|BTD	REV__ENSG00000169814|ENST00000643237|BTD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2575378417969	2	406.255446	810.496338	0.12581	5.111E-05	3.5587	0.0014458	3.6846	0.0014969	406.25676185595603	33.224	0.95024	33.334	33.07	34.021	0.10991					93	41	3	0	0	0	0.89457	1	1643	1643		37.028	1.8278	1	425420	+		17575	21604	11832	11841	20305	20305					0.08351007593989834
ILGVPNKA	8	Unmodified	_ILGVPNKA_					0	0	0			REV__ENSG00000169814|ENST00000643237|BTD	REV__ENSG00000169814|ENST00000643237|BTD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25750732421875	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.82419	1	3838	3838		13.775	0	1	334920	+		17576	21604	11832	11841	20306	20306					0.08351007593989834
ILGVPNKA	8	Unmodified	_ILGVPNKA_					0	0	0			REV__ENSG00000169814|ENST00000643237|BTD	REV__ENSG00000169814|ENST00000643237|BTD	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.255446	810.496338	-0.79064	-0.0003212	4.6237	0.0018784	3.833	0.0015572	406.2572393005035	49.347	2.434	49.323	48.357	50.791	-0.024033	0.038939	0.00042535	NaN	26.796	127	57	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	259280	+		17577	21604	11832	11841							0.08351007593989834
ILGVVWGPG	9	Unmodified	_ILGVVWGPG_					0	0	0		ENST00000369774.8_3_10:105360489-105360906:-|nuORF	ENST00000369774.8_3_10:105360489-105360906:-|nuORF	ENST00000369774.8_3_10:105360489-105360906:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2604675292969	2	449.263271	896.511988	-1.381	-0.00062045	-4.4821	-0.0020136	-5.8631	-0.0026341	449.26107911518943	71.508	1.165	71.892	71.126	72.291	0.38449					61	27	3	0	0	0	0.78292	1	7956	7956		29.842	1.9593	1	1175400			17578	10625	11833	11842	20307	20307					0.059592941110508946
ILGYSDPFSTQ	11	Unmodified	_ILGYSDPFSTQ_					0	0	0		ENSG00000142149|ENST00000270112|HUNK	ENSG00000142149|ENST00000270112|HUNK	ENSG00000142149|ENST00000270112|HUNK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	614.8017578125	2	614.298236	1226.58192	0.084915	5.2163E-05	0.29251	0.00017969	0.37742	0.00023185	614.2981387177228	76.113	0.65402	76.067	75.824	76.478	-0.045982					42	17	3	0	0	0	0.36477	1	7553	7553		62.107	1.9892	1	252170			17579	4543	11834	11843	20308	20308					-0.022309168016590775
ILHANVHFAKG	11	Unmodified	_ILHANVHFAKG_					0	0	0			REV__nc|ENSG00000167377|P17027-2|ZNF23	REV__nc|ENSG00000167377|P17027-2|ZNF23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	603.8424072265625	2	603.840739	1205.66693	2.2716	0.0013717	0.90736	0.0005479	3.179	0.0019196	603.8413684972849	102.57	0.50162	102.8	102.41	102.91	0.2351					28	12	3	0	0	0	0.75921	1	12454	12454		19.997	3.5236	1	458020	+		17580	21382	11835	11844	20309	20309					0.07231918245452107
ILHELYSFLE	10	Unmodified	_ILHELYSFLE_					0	0	0		chr20:49135931-49143899|15|12.67|0.24|5.7|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143899,49145139|STAU1,None|2;chr20:49135931-49143854|15|14.2|0.47|4.91|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143854,49145139|STAU1,None|2	chr20:49135931-49143899|15|12.67|0.24|5.7|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143899,49145139|STAU1,None|2	chr20:49135931-49143899|15|12.67|0.24|5.7|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143899,49145139|STAU1,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.8908386230469	3	421.892173	1262.65469	0.086923	3.6672E-05	-2.0866	-0.0008803	-1.9996	-0.00084363	421.8912283543651	28.979	0.91446	29.091	28.756	29.67	0.11225					126	46	4	0	0	0	0.86471	1	1230	1230		30.318	2.2362	1	973080			17581	363	11836	11845	20310	20310					0.03386836991739983
ILHGRKWPTT	10	Unmodified	_ILHGRKWPTT_					0	0	0			REV__ENST00000414676.5_1_20:303110-303203:-|nuORF	REV__ENST00000414676.5_1_20:303110-303203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.8460693359375	2	604.848564	1207.68258	-0.095899	-5.8004E-05	-3.879	-0.0023462	-3.9749	-0.0024042	604.846117051297	96.108	3.1148	96.155	95.25	98.365	0.047707					211	72	4	0	0	0	0.86718	1	10285	10285		27.882	0.83493	1	638500	+		17582	26408	11837	11846	20311	20311					0.08704204762489098
ILHHLSKKM	9	Unmodified	_ILHHLSKKM_					0	0	0			REV__nc|ENSG00000196678|A8K979-3|ERI2	REV__nc|ENSG00000196678|A8K979-3|ERI2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8306884765625	2	553.828786	1105.64302	0.84671	0.00046893	2.1445	0.0011877	2.9912	0.0016566	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.7932	1	10588	10588		23.042	0.46283	1	5381700	+		17583	30133	11838	11847	20312	20312					0.09442361487435846
ILHIVYLS	8	Unmodified	_ILHIVYLS_					0	0	0			REV__ENST00000261226.8_1_12:94964130-94964496:-|nuORF	REV__ENST00000261226.8_1_12:94964130-94964496:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27734375	2	479.292028	956.569503	-0.83515	-0.00040028	-1.3262	-0.00063562	-2.1613	-0.0010359	479.29175962825303	84.291	0.81766	84.466	84.231	85.049	0.17561					21	18	2	0	0	0	0.4196	1	8182	8182		26.796	5.0938	1	114640	+		17584	24380	11839	11848	20313	20313					0.0894813631659872
ILHKCELVSLI	11	Unmodified	_ILHKCELVSLI_					0	0	0			REV__ENST00000367139.7_1_1:205738948-205739077:-|nuORF	REV__ENST00000367139.7_1_1:205738948-205739077:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.375732421875	2	634.375766	1266.73698	0.9338	0.00059238	1.0493	0.00066568	1.9831	0.0012581	634.376227424202	109.98	1.2195	110.05	109.76	110.98	0.073685					116	43	3	0	0	0	0.6921	1	11809	11809		32.812	1.2826	1	11835000	+		17585	25550	11840	11849	20314	20314					0.1142803579905376
ILHKNKMK	8	Unmodified	_ILHKNKMK_					0	0	0			REV__nc|ENSG00000198022|A6NJ88|SAGE2P	REV__nc|ENSG00000198022|A6NJ88|SAGE2P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3091125488281	2	506.310229	1010.60591	0.40486	0.00020498	-2.716	-0.0013752	-2.3112	-0.0011702	506.30888331142467	56.209	0.70053	56.309	55.673	56.373	0.099186					45	29	2	0	0	0	0.884	1	4718	4718		33.516	3.0119	1	200050	+		17586	30142	11841	11850	20315	20315					0.1010268994167518
ILHKRIYILTF	11	Unmodified	_ILHKRIYILTF_					0	0	0		nc|ENSG00000152952|O00469-3|PLOD2;ENST00000478436.1_1_3:145795570-145803239:-|nuORF	nc|ENSG00000152952|O00469-3|PLOD2	nc|ENSG00000152952|O00469-3|PLOD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.2747802734375	3	472.962374	1415.86529	-0.10824	-5.1192E-05	1.5391	0.00072793	1.4308	0.00067674	472.9645307483703	80.005	0.095749	80.067	80.008	80.104	0.062225					4	2	2	0	0	0	0.1767	1	7818	7818		30.569	24.87	1	20818			17587	14998	11842	11851	20316	20316					0.17399339104440514
ILHKTISLANR	11	Unmodified	_ILHKTISLANR_					0	0	0			REV__ENST00000462156.1_1_2:231249961-231253449:+|nuORF	REV__ENST00000462156.1_1_2:231249961-231253449:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5924072265625	3	422.594461	1264.76155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.371	1	55.344	54.844	55.844	-0.027279								0	0	0	0.56276	1	5038	5038		22.562	4.7284	1		+		17588	27047	11843	11852	20317	20317					0.13976431996798055
ILHLGNVY	8	Unmodified	_ILHLGNVY_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.737548828125	2	464.766178	927.517802	-0.4586	-0.00021314	0.92967	0.00043208	0.47107	0.00021894	464.7663347529587	53.21	0.70612	53.824	53.572	54.278	0.61436					32	16	3	0	0	0	0.4196	1	5397	5397		37.028	7.1869	1	378480			17589	1679	11844	11853	20318	20318					0.05114392622704145
ILHLLLTFPKG	11	Unmodified	_ILHLLLTFPKG_					0	0	0		nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3910522460938	2	626.394816	1250.77508	-0.23069	-0.00014451	1.7611	0.0011032	1.5304	0.00095864	626.8976589228391	108.34	0.20885	108.3	108.17	108.38	-0.042404					11	7	2	0	0	0	0.75041	1	11809	11809		21.96	5.4867	1	439820			17590	7298	11845	11854	20319	20319					0.159722897760048
ILHLLLTFPKG	11	Unmodified	_ILHLLLTFPKG_					0	0	0		nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3917846679688	2	626.394816	1250.77508	-0.23213	-0.00014541	3.3863	0.0021212	3.1542	0.0019758	626.39673890101	109.86	0.10927	109.81	109.72	109.83	-0.055084					7	5	2	0	0	0	0.7342	1	11949	11949		25.574	4.6271	1	799350			17591	7298	11845	11854	20320	20320					0.159722897760048
ILHLLLTFPKG	11	Unmodified	_ILHLLLTFPKG_					0	0	0		nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3909301757812	2	626.394816	1250.77508	1.3699	0.00085812	2.3039	0.0014431	3.6738	0.0023013	626.3960367869279	109.98	0.78311	110.11	109.72	110.51	0.12289					43	29	2	0	0	0	0.75041	1	11833	11833		21.96	5.2425	1	2615600			17592	7298	11845	11854	20321	20321					0.159722897760048
ILHLLLTFPKG	11	Unmodified	_ILHLLLTFPKG_					0	0	0		nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.391357421875	2	626.394816	1250.77508	6.325	0.0039619	-3.3425	-0.0020937	2.9824	0.0018682	626.3925398868604	109.87	0.514	109.94	109.72	110.23	0.068001					34	23	3	0	0	0	0.71452	1	13371	13371		29.15	8.3124	1	960900			17593	7298	11845	11854	20322	20322					0.159722897760048
ILHPTSHFT	9	Unmodified	_ILHPTSHFT_					0	0	0		ENST00000484546.1_1_9:123151516-123165527:-|nuORF	ENST00000484546.1_1_9:123151516-123165527:-|nuORF	ENST00000484546.1_1_9:123151516-123165527:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.7774658203125	2	526.779816	1051.54508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.399	1	31.479	30.979	31.979	0.079834								0	0	0	0.35186	1	2122	2122		47.916	1.9434	1				17594	12540	11846	11855	20323	20323					0.021368761630810695
ILHPVPATDP	10	Unmodified	_ILHPVPATDP_					0	0	0		nc|ENSG00000156711|O15264-2|MAPK13	nc|ENSG00000156711|O15264-2|MAPK13	nc|ENSG00000156711|O15264-2|MAPK13	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.7630615234375	2	530.295299	1058.57605	-0.034942	-1.8529E-05	-1.7741	-0.00094082	-1.8091	-0.00095935	530.2944250038865	85.115	0.13138	85.182	85.073	85.204	0.067261					4	2	2	0	0	0	0.37624	1	8513	8513		9.7057	0	1	19730			17595	15017	11847	11856	20324	20324					0.04910029477309763
ILHQVKRLI	9	Unmodified	_ILHQVKRLI_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3402099609375	2	560.371675	1118.7288	0.398	0.00022303	1.7015	0.00095345	2.0995	0.0011765	560.3730224431685	102.09	0.71158	102.28	101.97	102.69	0.19483					36	17	4	0	0	0	0.20789	1	10746	10746		7.6903	0	1	400800	+		17596	18793	11848	11857	20325	20325					0.17418269664608488
ILHREHVRRQ	10	Unmodified	_ILHREHVRRQ_					0	0	0			REV__nc|ENSG00000116731|Q13029-5|PRDM2	REV__nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.596435546875	3	448.597088	1342.76943	1.0026	0.00044974	-2.2479	-0.0010084	-1.2454	-0.00055868	448.5960230906909	33.014	0.92749	33.225	32.851	33.778	0.21168					63	21	4	0	0	0	0.69342	1	2365	2365		45.022	2.6841	1	1860300	+		17597	18220	11849	11858	20326	20326					0.11176004036929044
ILHRKPPTDQR	11	Unmodified	_ILHRKPPTDQR_					0	0	0			REV__ENST00000474125.6_1_10:102770610-102771988:-|nuORF	REV__ENST00000474125.6_1_10:102770610-102771988:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.26617431640625	3	454.265115	1359.77352	-0.32516	-0.00014771	0.57871	0.00026289	0.25355	0.00011518	454.2651987335972	24.924	0.82389	24.879	24.362	25.186	-0.044586					41	18	3	0	0	0	0.69687	1	997	997		32.034	4.3902	1	36394	+		17598	22884	11850	11859	20327	20327					0.10802048739969905
ILHRPGRPTG	10	Unmodified	_ILHRPGRPTG_					0	0	0			REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.305908203125	2	552.325257	1102.63596	2.4401	0.0013477	-4.1145	-0.0022725	-1.6744	-0.00092479	552.3227357939619	94.36	0.76237	94.301	93.628	94.391	-0.059212					24	17	2	0	0	0	0.37624	1	9968	9968		37.159	9.2769	1	75272	+		17599	16233	11851	11860	20328	20328					0.08874764931215395
ILHTQVKRR	9	Unmodified	_ILHTQVKRR_					0	0	0			REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.843017578125	2	575.862006	1149.70946	-0.46849	-0.00026979	3.2821	0.00189	2.8136	0.0016202	576.3653538496781	92.812	0.26	92.812	92.721	92.981	0					6	5	2	0	0	0	0.20789	1	9134	9134		14.865	0	1	17573	+		17600	29828	11852	11861	20329	20329					0.1405931337369566
ILHYESFEL	9	Unmodified	_ILHYESFEL_					0	0	0		ENST00000505328.1_1_4:108991620-108999477:-|nuORF	ENST00000505328.1_1_4:108991620-108999477:-|nuORF	ENST00000505328.1_1_4:108991620-108999477:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.79150390625	2	575.792589	1149.57063	0.69244	0.0003987	-0.55306	-0.00031845	0.13938	8.0254E-05	575.792113620692	80.316	0.71577	80.458	80.188	80.904	0.14117					76	23	4	0	0	0	0.19953	1	7634	7634		73.975	2.679	1	404920			17601	12923	11853	11862	20330	20330					0.0018230589485028759
ILIASQRSSA	10	Unmodified	_ILIASQRSSA_					0	0	0		ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.303466796875	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.85934	1	9172	9172		35.618	4.0885	1	13080000			17602	3843	11854	11863	20331	20331					0.07224530363305348
ILIASQRSSA	10	Unmodified	_ILIASQRSSA_					0	0	0		ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3034057617188	2	523.303655	1044.59276	1.2403	0.00064907	-1.1926	-0.00062409	0.047741	2.4983E-05	523.302929168532	91.415	2.5669	91.46	91.141	93.708	0.045448					111	60	2	0	0	0	0.86471	1	9522	9522		30.318	1.1682	1	1018700			17603	3843	11854	11863	20332	20332					0.07224530363305348
ILIASQRSSA	10	Unmodified	_ILIASQRSSA_					0	0	0		ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3036499023438	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.85934	1	10393	10393		35.618	0.46626	1	11944000			17604	3843	11854	11863	20333	20333					0.07224530363305348
ILIDQDLKPWL	11	Unmodified	_ILIDQDLKPWL_					0	0	0		nc|ENSG00000131044|Q3SXZ7-2|TTLL9;ENSG00000131044|ENST00000535842|TTLL9	nc|ENSG00000131044|Q3SXZ7-2|TTLL9	nc|ENSG00000131044|Q3SXZ7-2|TTLL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9325866699219	3	451.930739	1352.77039	1.2214	0.000552	3.0437	0.0013755	4.2651	0.0019275	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.68431	1	10824	10824		34.087	6.005	1	1043200			17605	14912	11855	11864	20334	20334					0.1081136084260379
ILIEETPVL	9	Unmodified	_ILIEETPVL_					0	0	0			REV__ENSG00000076356|ENST00000367033|PLXNA2	REV__ENSG00000076356|ENST00000367033|PLXNA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8086547851562	2	513.807708	1025.60086	-0.82069	-0.00042168	3.6184	0.0018592	2.7978	0.0014375	513.8095156540879	56.98	2.3357	57.013	56.616	58.952	0.033184					104	77	2	0	0	0	0.76996	1	5232	5232		33.516	9.3128	1	188070	+		17606	16725	11856	11865	20335	20335					0.08908664560044599
ILIFNNHG	8	Unmodified	_ILIFNNHG_					0	0	0		ENST00000395548.6_1_5:115177734-115188681:+|nuORF;ENST00000515066.6_1_5:115177734-115230799:+|nuORF;ENSG00000177879|ENST00000316788|AP3S1	ENST00000395548.6_1_5:115177734-115188681:+|nuORF	ENST00000395548.6_1_5:115177734-115188681:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2536315917969	2	464.255977	926.497401	-1.0566	-0.00049054	-3.1539	-0.0014642	-4.2105	-0.0019547	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.94132	1	8230	8230		54.765	8.7924	1	1603800			17607	7168	11857	11866	20336	20336					0.031212219629082938
ILIGAYTT	8	Unmodified	_ILIGAYTT_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	426.2460021972656	2	426.247286	850.48002	-1.1835	-0.00050446	-1.6997	-0.0007245	-2.8832	-0.001229	426.24646575286147	87.846	4.0837	87.846	85.783	89.866	0					184	94	2	0	0	0	0.86791	1	8480	8480		28.254	6.5519	1	2605100			17608	5717	11858	11867	20337	20337					0.04879881637236849
ILIGAYTT	8	Unmodified	_ILIGAYTT_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.24591064453125	2	426.247286	850.48002	1.0559	0.00045007	-3.9444	-0.0016813	-2.8885	-0.0012312	426.2455229557475	87.647	3.9379	87.573	85.625	89.563	-0.074005					153	92	2	0	0	0	0.82464	1	9126	9126		21.702	1.2205	1	4306400			17609	5717	11858	11867	20338	20338					0.04879881637236849
ILIGAYTT	8	Unmodified	_ILIGAYTT_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.2457275390625	2	426.247286	850.48002	-1.7038	-0.00072625	-1.2223	-0.00052102	-2.9262	-0.0012473	426.246697883185	87.448	3.9173	87.649	85.72	89.637	0.20114					165	92	2	0	0	0	0.81548	1	8682	8682		20.482	1.1219	1	4015800			17610	5717	11858	11867	20339	20339					0.04879881637236849
ILIGAYTT	8	Unmodified	_ILIGAYTT_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.2459411621094	2	426.247286	850.48002	-1.843	-0.00078557	-1.0037	-0.00042784	-2.8467	-0.0012134	426.2467741737408	87.495	4.0009	87.665	85.686	89.687	0.16922					180	93	4	0	0	0	0.86791	1	8595	8595		28.254	2.8041	1	3180100			17611	5717	11858	11867	20340	20340					0.04879881637236849
ILIGITEP	8	Unmodified	_ILIGITEP_					0	0	0		ENST00000461241.1_1_22:31523357-31529733:+|nuORF;nc|ENSG00000185133|Q15735-3|INPP5J;nc|ENSG00000185133|Q15735-2|INPP5J;ENSG00000185133|ENST00000331075|INPP5J	ENST00000461241.1_1_22:31523357-31529733:+|nuORF	ENST00000461241.1_1_22:31523357-31529733:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2615051269531	2	428.262936	854.51132	1.4286	0.0006118	-4.4022	-0.0018853	-2.9736	-0.0012735	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.89457	1	9508	9508		37.028	1.8278	1	57042000			17612	7683	11859	11868	20341	20341					0.07824454671322201
ILIGITEP	8	Unmodified	_ILIGITEP_					0	0	0		ENST00000461241.1_1_22:31523357-31529733:+|nuORF;nc|ENSG00000185133|Q15735-3|INPP5J;nc|ENSG00000185133|Q15735-2|INPP5J;ENSG00000185133|ENST00000331075|INPP5J	ENST00000461241.1_1_22:31523357-31529733:+|nuORF	ENST00000461241.1_1_22:31523357-31529733:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.2615051269531	2	428.262936	854.51132	0.64464	0.00027608	-3.646	-0.0015614	-3.0014	-0.0012854	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.86791	2	9091	9068;9091		33.516	5.2613	1	40631000			17613	7683	11859	11868	20342;20343	20343					0.07824454671322201
ILIHKHNLEY	10	Unmodified	_ILIHKHNLEY_					0	0	0		ENST00000538784.2_1_12:132635515-132636943:+|nuORF;ENSG00000184967|ENST00000330579|NOC4L	ENST00000538784.2_1_12:132635515-132636943:+|nuORF	ENST00000538784.2_1_12:132635515-132636943:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3594360351562	2	640.361505	1278.70846	-0.067952	-4.3514E-05	-4.0514	-0.0025944	-4.1194	-0.0026379	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.8651	1	10686	10686		25.574	2.0514	1	640120			17614	7659	11860	11869	20344	20344					0.08025054214158445
ILIKHLVKVSL	11	Unmodified	_ILIKHLVKVSL_					0	0	0		ENSG00000165895|ENST00000298815|ARHGAP42	ENSG00000165895|ENST00000298815|ARHGAP42	ENSG00000165895|ENST00000298815|ARHGAP42	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	631.8314819335938	2	631.931566	1261.84858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.949	1	60.043	59.543	60.543	0.094059								0	0	0	0.56276	1	5161	5161		14.865	9.3071	1				17615	6133	11861	11870	20345	20345					0.22812838218510478
ILIKKGRGN	9	Unmodified	_ILIKKGRGN_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.8244934082031	2	499.827101	997.639649	1.0233	0.00051145	-0.42263	-0.00021124	0.60063	0.00030021	499.8266355697786	19.569	0.38315	19.641	19.479	19.862	0.071129					31	13	3	0	0	0	0.7932	1	424	424		25.45	1.2474	1	67609			17616	3009	11862	11871	20346	20346					0.14073434705096588
ILIKTPDMV	9	Oxidation (M)	_ILIKTPDM(Oxidation (M))V_		ILIKTPDM(1)V		ILIKTPDM(49)V	0	0	1			REV__nc|ENSG00000152520|Q58A45-2|PAN3	REV__nc|ENSG00000152520|Q58A45-2|PAN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3036499023438	2	523.301736	1044.58892	-0.041207	-2.1563E-05	3.5312	0.0018479	3.49	0.0018263	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.55097	1	9311	9311		49.442	13.823	1	12431000	+		17617	29934	11863	11872	20347	20347		436			0.06840724545213561
ILILGKLNNL	10	Unmodified	_ILILGKLNNL_					0	0	0		ENSG00000090060|ENST00000216277|PAPOLA;ENST00000554130.5_1_14:96968887-96993844:+|nuORF;nc|ENSG00000090060|P51003-2|PAPOLA	ENSG00000090060|ENST00000216277|PAPOLA	ENSG00000090060|ENST00000216277|PAPOLA	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.8646850585938	2	555.865892	1109.71723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.294	1	77.429	76.929	77.929	0.13478								0	0	0	0.45132	1	7257	7257		30.504	5.9844	1				17618	1638	11864	11873	20348	20348					0.16676027850598985
ILILTKVAF	9	Unmodified	_ILILTKVAF_					0	0	0		ENST00000485507.5_1_1:40204572-40207704:+|nuORF;ENST00000495526.5_1_1:40205841-40208939:+|nuORF	ENST00000485507.5_1_1:40204572-40207704:+|nuORF	ENST00000485507.5_1_1:40204572-40207704:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7727966308594	2	509.338978	1016.6634	-0.10359	-5.2763E-05	-0.64301	-0.00032751	-0.7466	-0.00038027	509.3384959469934	75.021	0.54373	75.413	75.194	75.738	0.3911					18	12	2	0	0	0	0.20789	1	8491	8491		27.882	0	1	141040			17619	12557	11865	11874	20349	20349					0.1557385541889289
ILILTKVAF	9	Unmodified	_ILILTKVAF_					0	0	0		ENST00000485507.5_1_1:40204572-40207704:+|nuORF;ENST00000495526.5_1_1:40205841-40208939:+|nuORF	ENST00000485507.5_1_1:40204572-40207704:+|nuORF	ENST00000485507.5_1_1:40204572-40207704:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7735595703125	2	509.338978	1016.6634	0.63744	0.00032468	-0.33002	-0.00016809	0.30742	0.00015658	509.84051626690945	74.891	0.37569	75.456	75.208	75.584	0.56458					17	8	3	0	0	0	0.20789	1	8486	8486		53.351	5.4358	1	194570			17620	12557	11865	11874	20350	20350					0.1557385541889289
ILILVFEHKGP	11	Unmodified	_ILILVFEHKGP_					0	0	0			REV__chr2:170844157-170844961|18|15.44|0.17|6.52|+|2|GAD1,None|1	REV__chr2:170844157-170844961|18|15.44|0.17|6.52|+|2|GAD1,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.59381103515625	3	422.592058	1264.75434	1.8674	0.00078915	0.61077	0.00025811	2.4782	0.0010473	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.78391	1	4907	4907		14.694	0	1	997830	+		17621	15738	11866	11875	20351	20351					0.13255699396358978
ILINAISLTF	10	Unmodified	_ILINAISLTF_					0	0	0		ENSG00000214787|ENST00000651255|MS4A4E	ENSG00000214787|ENST00000651255|MS4A4E	ENSG00000214787|ENST00000651255|MS4A4E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3355712890625	2	552.8368	1103.65905	-1.299	-0.00071813	-3.9295	-0.0021724	-5.2285	-0.0028905	552.8347210563574	83.7	2.6246	83.838	82.553	85.177	0.13811					95	60	2	0	0	0	0.86218	1	8035	8035		32.812	3.6629	1	186100			17622	8637	11867	11876	20352	20352					0.11136346205330483
ILINSNLVC	9	Unmodified	_ILINSNLVC_					0	0	0		ENSG00000044524|ENST00000336596|EPHA3;nc|ENSG00000145242|P54756-3|EPHA5;nc|ENSG00000145242|P54756-2|EPHA5;ENSG00000145242|ENST00000613740|EPHA5;nc|ENSG00000145242|P54756|EPHA5	ENSG00000044524|ENST00000336596|EPHA3;nc|ENSG00000145242|P54756-3|EPHA5	ENSG00000044524|ENST00000336596|EPHA3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7803039550781	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.786	1	83.933	83.433	84.433	0.14694								0	0	0	0.30053	1	8131	8131		30.504	0	1				17623	949;4757	11868	11877	20353	20353					0.0480328471392113
ILIPIETG	8	Unmodified	_ILIPIETG_					0	0	0			REV__ENST00000576723.5_1_17:7852320-7852825:+|nuORF	REV__ENST00000576723.5_1_17:7852320-7852825:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2615051269531	2	428.262936	854.51132	-1.8497	-0.00079216	-1.179	-0.00050492	-3.0287	-0.0012971	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.88915	1	8999	8999		35.201	6.9464	1	31323000	+		17624	28997	11869	11878	20354	20354					0.07824454671344938
ILIPQNLAPP	10	Unmodified	_ILIPQNLAPP_					0	0	0			REV__nc|ENSG00000106536|P78424-2|POU6F2	REV__nc|ENSG00000106536|P78424-2|POU6F2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326904296875	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.84112	2	12603	12179;12603		37.159	8.0096	1	4041000	+		17625	17616	11870	11879	20355;20356	20356					0.1093947940810267
ILIQRKYRA	9	Unmodified	_ILIQRKYRA_					0	0	0		ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8662109375	2	580.866757	1159.71896	-1.099	-0.0006384	-0.0099015	-5.7514E-06	-1.1089	-0.00064415	580.866642906103	78.68	1.2707	79.091	78.551	79.822	0.4106					73	29	3	0	0	0	0.7932	1	8984	8984		23.042	3.939	1	1935400			17626	1155	11871	11880	20357	20357					0.14549081659242802
ILIREKRREQL	11	Unmodified	_ILIREKRREQL_					0	0	0		ENSG00000165113|ENST00000376371|GKAP1	ENSG00000165113|ENST00000376371|GKAP1	ENSG00000165113|ENST00000376371|GKAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.63677978515625	3	485.30357	1452.88888	1.0097	0.00049003	-3.0519	-0.0014811	-2.0422	-0.00099107	485.3020682659724	16.477	0.64601	16.554	16.427	17.073	0.07715					46	24	4	0	0	0	0.80813	1	107	107		9.6461	0	1	156250			17627	6047	11872	11881	20358	20358					0.18055152870965685
ILIRFSDYV	9	Unmodified	_ILIRFSDYV_					0	0	0		ENSG00000112137|ENST00000332995|PHACTR1;nc|ENSG00000087495|Q96KR7-3|PHACTR3;nc|ENSG00000087495|Q96KR7-2|PHACTR3;nc|ENSG00000087495|Q96KR7-4|PHACTR3;ENSG00000087495|ENST00000371015|PHACTR3	ENSG00000112137|ENST00000332995|PHACTR1	ENSG00000112137|ENST00000332995|PHACTR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	563.8167114257812	2	563.318774	1124.623	-1.0735	-0.0006047	-2.958	-0.0016663	-4.0315	-0.002271	563.8174777116847	55.775	1.0022	55.775	55.238	56.24	0					49	27	4	0	0	0	0.77546	1	4771	4771		31.955	6.5047	1	74923			17628	2633	11873	11882	20359	20359					0.06566889028476908
ILIRRKRSVFF	11	Unmodified	_ILIRRKRSVFF_					0	0	0			REV__nc|ENSG00000162843|B1ANS9-2|WDR64	REV__nc|ENSG00000162843|B1ANS9-2|WDR64	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3081970214844	3	478.973384	1433.89832	-1.6535	-0.00079198	3.9148	0.0018751	2.2613	0.0010831	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.8398	1	3405	3405		6.6596	0.33873	1	252010	+		17629	20854	11874	11883	20360	20360					0.19872965947138255
ILIRRKRSVFF	11	Unmodified	_ILIRRKRSVFF_					0	0	0			REV__nc|ENSG00000162843|B1ANS9-2|WDR64	REV__nc|ENSG00000162843|B1ANS9-2|WDR64	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.30731201171875	3	478.973384	1433.89832	-1.6051	-0.0007688	3.9699	0.0019015	2.3648	0.0011327	478.9751768575692	49.706	2.3794	49.706	48.538	50.918	0					127	57	3	0	0	0	0.80361	1	3926	3926		10.587	1.375	1	134370	+		17630	20854	11874	11883	20361	20361					0.19872965947138255
ILIRRKRSVFF	11	Unmodified	_ILIRRKRSVFF_					0	0	0			REV__nc|ENSG00000162843|B1ANS9-2|WDR64	REV__nc|ENSG00000162843|B1ANS9-2|WDR64	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.30865478515625	3	478.973384	1433.89832	-0.89818	-0.00043021	3.5722	0.001711	2.674	0.0012808	478.9750533889841	51.817	1.8474	51.852	50.982	52.829	0.034588					134	56	3	0	0	0	0.78085	1	4177	4177		15.333	1.8252	1	276750	+		17631	20854	11874	11883	20362	20362					0.19872965947138255
ILIRRKRSVFF	11	Unmodified	_ILIRRKRSVFF_					0	0	0			REV__nc|ENSG00000162843|B1ANS9-2|WDR64	REV__nc|ENSG00000162843|B1ANS9-2|WDR64	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9786071777344	3	478.973384	1433.89832	-0.085377	-4.0893E-05	1.9381	0.0009283	1.8527	0.0008874	479.30837143687245	43.044	1.6592	42.994	42.147	43.806	-0.050308					106	44	4	0	0	0	0.80593	1	3006	3006		10.104	0.8921	1	375540	+		17632	20854	11874	11883	20363	20363					0.19872965947138255
ILIRRKRSVFF	11	Unmodified	_ILIRRKRSVFF_					0	0	0			REV__nc|ENSG00000162843|B1ANS9-2|WDR64	REV__nc|ENSG00000162843|B1ANS9-2|WDR64	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9747009277344	3	478.973384	1433.89832	-0.20548	-9.8418E-05	2.5121	0.0012032	2.3066	0.0011048	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.78085	2	3388	3348;3388		15.333	3.4007	1	468190	+		17633	20854	11874	11883	20364;20365	20365					0.19872965947138255
ILIRRKRSVFF	11	Unmodified	_ILIRRKRSVFF_					0	0	0			REV__nc|ENSG00000162843|B1ANS9-2|WDR64	REV__nc|ENSG00000162843|B1ANS9-2|WDR64	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97454833984375	3	478.973384	1433.89832	-0.25402	-0.00012167	2.9951	0.0014346	2.741	0.0013129	478.9747709878051	47.62	1.4426	47.532	47.242	48.685	-0.087646					53	40	2	0	0	0	0.78683	1	3620	3620		14.086	0.57807	1	370120	+		17634	20854	11874	11883	20366	20366					0.19872965947138255
ILISAVLPT	9	Unmodified	_ILISAVLPT_					0	0	0		nc|ENSG00000104381|Q8TB36-2|GDAP1;ENSG00000104381|ENST00000220822|GDAP1	nc|ENSG00000104381|Q8TB36-2|GDAP1	nc|ENSG00000104381|Q8TB36-2|GDAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.800537109375	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3180	3180		21.96	2.5999	1	890090			17635	2129	11875	11884	20367	20367					0.11905003113804469
ILISHAPLPHL	11	Unmodified	_ILISHAPLPHL_					0	0	0		ENST00000573807.5_1_17:7216077-7216773:-|nuORF	ENST00000573807.5_1_17:7216077-7216773:-|nuORF	ENST00000573807.5_1_17:7216077-7216773:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.873291015625	2	605.868966	1209.72338	2.1175	0.0012829	3.5745	0.0021657	5.692	0.0034486	605.8709120957792	99.886	1.4328	100.22	99.77	101.2	0.33295					98	35	4	0	0	0	0.75041	1	12074	12074		21.96	1.013	1	1222300			17636	14026	11876	11885	20368	20368					0.12690546082126275
ILISILYVSL	10	Unmodified	_ILISILYVSL_					0	0	0		nc|ENSG00000088766|Q9UJA2-2|CRLS1;ENSG00000088766|ENST00000378863|CRLS1;ENST00000489345.5_1_20:5990447-6004030:+|nuORF;ENST00000609154.1_1_20:5988006-5996237:+|nuORF	nc|ENSG00000088766|Q9UJA2-2|CRLS1	nc|ENSG00000088766|Q9UJA2-2|CRLS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.364501953125	2	567.36265	1132.71075	0.36025	0.00020439	1.3571	0.00076996	1.7173	0.00097435	567.3632714206227	44.36	2.296	44.409	43.67	45.966	0.048996					151	56	4	0	0	0	0.85694	1	3262	3262		21.96	2.8564	1	1558100			17637	1593	11877	11886	20369	20369					0.14970089899247796
ILISPIIIIG	10	Unmodified	_ILISPIIIIG_					0	0	0		ENST00000316985.7_1_8:38175222-38175387:-|nuORF	ENST00000316985.7_1_8:38175222-38175387:-|nuORF	ENST00000316985.7_1_8:38175222-38175387:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3609619140625	2	526.359911	1050.70527	1.0713	0.00056389	1.2303	0.0006476	2.3016	0.0012115	526.360423923534	32.788	1.6436	32.999	32.422	34.066	0.21168					152	38	5	0	0	0	0.85939	1	2384	2384		23.042	0	1	7743700			17638	9988	11878	11887	20370	20370					0.18194411107424457
ILISPKPG	8	Unmodified	_ILISPKPG_					0	0	0		ENST00000514498.1_1_4:166327046-166327295:-|nuORF	ENST00000514498.1_1_4:166327046-166327295:-|nuORF	ENST00000514498.1_1_4:166327046-166327295:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.76727294921875	2	412.765646	823.516739	-0.024773	-1.0226E-05	2.7576	0.0011383	2.7329	0.001128	412.7671753724154	37.892	4.8812	37.868	35.596	40.477	-0.023979					267	113	4	0	0	0	0.87479	1	2488	2488		30.504	0.6621	1	1546000			17639	13069	11879	11888	20371	20371					0.09792178253815109
ILISPKPG	8	Unmodified	_ILISPKPG_					0	0	0		ENST00000514498.1_1_4:166327046-166327295:-|nuORF	ENST00000514498.1_1_4:166327046-166327295:-|nuORF	ENST00000514498.1_1_4:166327046-166327295:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2672424316406	2	412.765646	823.516739	-1.8992	-0.00078392	4.1525	0.001714	2.2533	0.0009301	412.76765198426614	41.794	3.0272	41.798	40.935	43.962	0.0043983					161	84	4	0	0	0	0.86791	1	2718	2718		28.254	1.4582	1	640430			17640	13069	11879	11888	20372	20372					0.09792178253815109
ILITIIAMSA	10	Unmodified	_ILITIIAMSA_					0	0	0		ENSG00000099250|ENST00000374867|NRP1	ENSG00000099250|ENST00000374867|NRP1	ENSG00000099250|ENST00000374867|NRP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3035278320312	2	523.319928	1044.6253	-0.041335	-2.1632E-05	3.9132	0.0020479	3.8719	0.0020262	523.3235496745145	88.952	0.3334	89.02	88.793	89.126	0.068161					11	7	2	0	0	0	0.37624	1	9034	9034		44.117	19.598	1	52179			17641	1750	11880	11889	20373	20373					0.10477601441925799
ILITIIAMSA	10	Unmodified	_ILITIIAMSA_					0	0	0		ENSG00000099250|ENST00000374867|NRP1	ENSG00000099250|ENST00000374867|NRP1	ENSG00000099250|ENST00000374867|NRP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.303466796875	2	523.319928	1044.6253	1.6864	0.00088252	-2.4674	-0.0012912	-0.78097	-0.0004087	523.3193634123061	88.919	0.97173	88.847	88.593	89.565	-0.07238					26	22	2	0	0	0	0.37624	1	9304	9304		44.117	31.305	1	75441			17642	1750	11880	11889	20374	20374					0.10477601441925799
ILITIIAMSA	10	Unmodified	_ILITIIAMSA_					0	0	0		ENSG00000099250|ENST00000374867|NRP1	ENSG00000099250|ENST00000374867|NRP1	ENSG00000099250|ENST00000374867|NRP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.303466796875	2	523.319928	1044.6253	-1.5391	-0.00080543	-3.1693	-0.0016586	-4.7084	-0.002464	523.3182090420851	89.191	0.30435	89.364	89.168	89.472	0.17234					9	6	2	0	0	0	0.37624	1	8847	8847		44.117	29.252	1	105720			17643	1750	11880	11889	20375	20375					0.10477601441925799
ILIVIFVAM	9	Unmodified	_ILIVIFVAM_					0	0	0		ENSG00000101337|ENST00000398022|TM9SF4	ENSG00000101337|ENST00000398022|TM9SF4	ENSG00000101337|ENST00000398022|TM9SF4	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	510.63470458984375	2	509.822107	1017.62966	-0.66623	-0.00033966	0.32964	0.00016806	-0.33659	-0.0001716	509.8223379396334	104.09	0.58147	104.09	103.96	104.54	0					18	14	2	0	0	0	0.20789	1	10754	10754		29.842	15.177	1	60641			17644	1932	11881	11890	20376	20376					0.12155110655487533
ILIVIFVAM	9	Unmodified	_ILIVIFVAM_					0	0	0		ENSG00000101337|ENST00000398022|TM9SF4	ENSG00000101337|ENST00000398022|TM9SF4	ENSG00000101337|ENST00000398022|TM9SF4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.6336669921875	2	509.822107	1017.62966	3.0008	0.0015299	-3.368	-0.0017171	-0.36726	-0.00018724	509.8203293337331	104.01	0.84606	103.96	103.64	104.49	-0.043755					27	19	2	0	0	0	0.20789	1	11460	11460		29.842	5.6388	1	108240			17645	1932	11881	11890	20377	20377					0.12155110655487533
ILIVIFVAM	9	Unmodified	_ILIVIFVAM_					0	0	0		ENSG00000101337|ENST00000398022|TM9SF4	ENSG00000101337|ENST00000398022|TM9SF4	ENSG00000101337|ENST00000398022|TM9SF4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	509.822107	1017.62966	-0.35297	-0.00017995	-0.19093	-9.7339E-05	-0.5439	-0.00027729	509.82201191138904	103.7	0.69461	103.88	103.62	104.32	0.18298	-0.091269	0.00062371	NaN	29.842	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127350			17646	1932	11881	11890							0.12155110655487533
ILIVIFVAM	9	Unmodified	_ILIVIFVAM_					0	0	0		ENSG00000101337|ENST00000398022|TM9SF4	ENSG00000101337|ENST00000398022|TM9SF4	ENSG00000101337|ENST00000398022|TM9SF4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	509.822107	1017.62966	0.81204	0.000414	-1.3167	-0.00067127	-0.50463	-0.00025727	509.82147537614185	103.82	0.70173	103.93	103.66	104.36	0.11684	-0.03693	-0.00052415	NaN	29.842	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127540			17647	1932	11881	11890							0.12155110655487533
ILIWKMSQVIL	11	Unmodified	_ILIWKMSQVIL_					0	0	0			REV__ENST00000367976.3_1_6:132269530-132269650:-|nuORF	REV__ENST00000367976.3_1_6:132269530-132269650:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.94378662109375	3	448.608831	1342.80467	-0.12449	-5.5849E-05	1.2596	0.00056506	1.1351	0.00050921	448.94365307156517	77.124	0.95989	77.076	76.709	77.669	-0.048264					104	45	3	0	0	0	0.77205	1	7656	7656		17.167	1.8336	1	533170	+		17648	25583	11882	11891	20378	20378					0.146974857298801
ILIWKMSQVIL	11	Unmodified	_ILIWKMSQVIL_					0	0	0			REV__ENST00000367976.3_1_6:132269530-132269650:-|nuORF	REV__ENST00000367976.3_1_6:132269530-132269650:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.608642578125	3	448.608831	1342.80467	-1.3856	-0.00062161	2.428	0.0010892	1.0424	0.00046761	448.609746420413	76.801	0.97182	76.89	76.464	77.435	0.089363					88	45	3	0	0	0	0.74022	1	7194	7194		24.232	0	1	651130	+		17649	25583	11882	11891	20379	20379					0.146974857298801
ILKAFSKKP	9	Unmodified	_ILKAFSKKP_					0	0	0		nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A	nc|ENSG00000169432|Q15858-4|SCN9A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.31396484375	2	516.334227	1030.6539	0.86758	0.00044796	-1.4027	-0.00072426	-0.5351	-0.00027629	516.3338237550333	99.738	0.26289	99.785	99.633	99.896	0.047523					7	5	2	0	0	0	0.20789	1	10708	10708		16.473	3.514	1	73491			17650	313	11883	11892	20380	20380					0.1398008713335912
ILKAHSLALS	10	Unmodified	_ILKAHSLALS_					0	0	0		ENST00000471075.1_1_3:171371881-171395443:-|nuORF	ENST00000471075.1_1_3:171371881-171395443:-|nuORF	ENST00000471075.1_1_3:171371881-171395443:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.8237915039062	2	526.826766	1051.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.608	1	71.742	71.242	72.242	0.13356								0	0	0	0.45132	1	6524	6524		20.947	0	1				17651	12233	11884	11893	20381	20381					0.11522595265364544
ILKASRHACV	10	Unmodified	_ILKASRHACV_					0	0	0		nc|ENSG00000095002|P43246-2|MSH2;ENSG00000095002|ENST00000233146|MSH2	nc|ENSG00000095002|P43246-2|MSH2	nc|ENSG00000095002|P43246-2|MSH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.3175048828125	2	549.316043	1096.61753	3.3171	0.0018221	-0.33799	-0.00018566	2.9791	0.0016365	549.3157779565678	101.02	2.3329	100.97	100.53	102.87	-0.052109					129	55	4	0	0	0	0.8651	2	11008	10960;11008		26.693	6.6961	1	1991000			17652	1716	11885	11894	20382;20383	20383					0.07308886965006423
ILKASRHACV	10	Unmodified	_ILKASRHACV_					0	0	0		nc|ENSG00000095002|P43246-2|MSH2;ENSG00000095002|ENST00000233146|MSH2	nc|ENSG00000095002|P43246-2|MSH2	nc|ENSG00000095002|P43246-2|MSH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.3178100585938	2	549.316043	1096.61753	1.2725	0.00069901	1.6792	0.00092239	2.9517	0.0016214	549.3168832768056	100.86	2.4507	100.91	100.43	102.88	0.046356					139	58	4	0	0	0	0.8651	1	10830	10830		25.574	1.3713	1	1880500			17653	1716	11885	11894	20384	20384					0.07308886965006423
ILKASRHACV	10	Unmodified	_ILKASRHACV_					0	0	0		nc|ENSG00000095002|P43246-2|MSH2;ENSG00000095002|ENST00000233146|MSH2	nc|ENSG00000095002|P43246-2|MSH2	nc|ENSG00000095002|P43246-2|MSH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.318359375	2	549.316043	1096.61753	0.23279	0.00012788	2.6164	0.0014372	2.8492	0.0015651	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.8608	1	10587	10587		34.173	12.213	1	3004300			17654	1716	11885	11894	20385	20385					0.07308886965006423
ILKASRHACV	10	Unmodified	_ILKASRHACV_					0	0	0		nc|ENSG00000095002|P43246-2|MSH2;ENSG00000095002|ENST00000233146|MSH2	nc|ENSG00000095002|P43246-2|MSH2	nc|ENSG00000095002|P43246-2|MSH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3172607421875	2	549.316043	1096.61753	-1.4544	-0.00079891	4.3496	0.0023893	2.8953	0.0015904	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.86218	1	10483	10483		32.812	6.1195	1	2310400			17655	1716	11885	11894	20386	20386					0.07308886965006423
ILKASVEYIK	10	Unmodified	_ILKASVEYIK_					0	0	0		ENST00000462828.1_1_7:115580420-115582090:-|nuORF;nc|ENSG00000105967|O14948-3|TFEC;nc|ENSG00000105967|O14948-4|TFEC;chr7:115984513-116110708|25|13.36|0.7|4.24|-|ENST00000484212|TFEC,TFEC;nc|ENSG00000105967|O14948-2|TFEC;ENSG00000105967|ENST00000265440|TFEC	ENST00000462828.1_1_7:115580420-115582090:-|nuORF	ENST00000462828.1_1_7:115580420-115582090:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3541259765625	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.86718	1	12429	12429		27.882	2.3082	1	3937500			17656	488	11886	11895	20387	20387					0.1213201775105972
ILKCIIGN	8	Unmodified	_ILKCIIGN_					0	0	0			REV__ENSG00000166866|ENST00000300119|MYO1A	REV__ENSG00000166866|ENST00000300119|MYO1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26568603515625	2	437.264956	872.515359	0.051124	2.2355E-05	1.2114	0.00052972	1.2626	0.00055208	437.26563820123806	25.538	2.1653	25.281	24.501	26.666	-0.25721					170	48	6	0	0	0	0.81548	1	1415	1415		20.482	0	1	21512000	+		17657	21332	11887	11896	20388	20388					0.0740022089340755
ILKDLLPETIP	11	Unmodified	_ILKDLLPETIP_					0	0	0		nc|ENSG00000096717|Q96EB6-2|SIRT1;ENSG00000096717|ENST00000212015|SIRT1	nc|ENSG00000096717|Q96EB6-2|SIRT1	nc|ENSG00000096717|Q96EB6-2|SIRT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3794555664062	2	626.381571	1250.74859	-1.2034	-0.00075379	-1.9753	-0.0012373	-3.1787	-0.0019911	626.3801652504003	107.85	0.68172	107.89	107.29	107.97	0.036125					50	16	4	0	0	0	0.72228	1	11524	11524		27.882	0.83493	1	22990000			17658	1743	11888	11897	20389	20389					0.13324556094039508
ILKEGSVLDIL	11	Unmodified	_ILKEGSVLDIL_					0	0	0		nc|ENSG00000124789|P49790-3|NUP153;ENSG00000124789|ENST00000262077|NUP153	nc|ENSG00000124789|P49790-3|NUP153	nc|ENSG00000124789|P49790-3|NUP153	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.57952880859375	3	400.579706	1198.71729	3.1796	0.0012737	-0.89864	-0.00035998	2.2809	0.00091369	400.57916816268914	115.86	0.63822	115.89	115.41	116.05	0.026466					29	20	2	0	0	0	0.76251	1	12694	12694		19.263	0	1	56920			17659	3362	11889	11898	20390	20390					0.12587983059961516
ILKEIIVFVE	10	Unmodified	_ILKEIIVFVE_					0	0	0		ENSG00000169126|ENST00000305242|ODAD2	ENSG00000169126|ENST00000305242|ODAD2	ENSG00000169126|ENST00000305242|ODAD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.212646484375	3	401.58468	1201.73221	0.27595	0.00011082	-0.87572	-0.00035167	-0.59977	-0.00024086	401.58433366916853	29.625	0.47292	29.535	29.276	29.749	-0.089546					15	10	2	0	0	0	0.37624	1	1919	1919		9.2118	0	1	35748			17660	6471	11890	11899	20391	20391					0.1394147492794673
ILKFLKLFV	9	Unmodified	_ILKFLKLFV_					0	0	0		ENST00000550448.5_1_12:49398244-49398481:-|nuORF	ENST00000550448.5_1_12:49398244-49398481:-|nuORF	ENST00000550448.5_1_12:49398244-49398481:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.340087890625	2	560.878271	1119.74199	0.86186	0.0004834	1.4795	0.00082981	2.3413	0.0013132	560.8788034690543	102.49	0.32686	102.63	102.49	102.82	0.13523					9	7	2	0	0	0	0.20789	1	10822	10822		12.959	8.9739	1	82331			17661	13655	11891	11900	20392	20392					0.1869070772397663
ILKFRTLAS	9	Unmodified	_ILKFRTLAS_					0	0	0			REV__nc|ENSG00000140403|Q8WW22-3|DNAJA4	REV__nc|ENSG00000140403|Q8WW22-3|DNAJA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.826171875	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.7932	1	10586	10586		21.96	1.9631	1	23918000	+		17662	29890	11892	11901	20393	20393					0.12214899127980061
ILKFRTLAS	9	Unmodified	_ILKFRTLAS_					0	0	0			REV__nc|ENSG00000140403|Q8WW22-3|DNAJA4	REV__nc|ENSG00000140403|Q8WW22-3|DNAJA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8264770507812	2	524.829309	1047.64407	-1.5341	-0.00080515	-2.1406	-0.0011234	-3.6747	-0.0019286	524.8280472672277	102.21	1.1307	102.34	101.89	103.02	0.13569					72	27	3	0	0	0	0.77546	1	10720	10720		31.955	11.008	1	626370	+		17663	29890	11892	11901	20394	20394					0.12214899127980061
ILKGHRKGELT	11	Unmodified	_ILKGHRKGELT_					0	0	0		nc|ENSG00000107815|Q96RR1-3|TWNK;nc|ENSG00000107815|Q96RR1-2|TWNK;ENSG00000107815|ENST00000311916|TWNK	nc|ENSG00000107815|Q96RR1-3|TWNK	nc|ENSG00000107815|Q96RR1-3|TWNK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.922119140625	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.76322	1	11406	11406		12.433	0	1	19495000			17664	2371	11893	11902	20395	20395					0.13056145479754377
ILKGIPTVM	9	Oxidation (M)	_ILKGIPTVM(Oxidation (M))_		ILKGIPTVM(1)		ILKGIPTVM(51)	0	0	1			REV__ENST00000589450.5_1_18:53745418-53763461:+|nuORF	REV__ENST00000589450.5_1_18:53745418-53763461:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3009338378906	2	494.298996	986.583439	0.76681	0.00037903	2.7292	0.001349	3.496	0.0017281	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.51307	1	10250	10250		51.335	14.176	1	52135000	+		17665	29160	11894	11903	20396	20396		428			0.08961045753403596
ILKIPLVCK	9	Unmodified	_ILKIPLVCK_					0	0	0		ENST00000299824.5_1_20:37548082-37548337:+|nuORF	ENST00000299824.5_1_20:37548082-37548337:+|nuORF	ENST00000299824.5_1_20:37548082-37548337:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8433837890625	2	513.840831	1025.66711	-0.043039	-2.2115E-05	4.0792	0.0020961	4.0362	0.002074	513.8427281190492	21.509	0.50888	21.444	21.265	21.774	-0.064743					30	16	3	0	0	0	0.7932	1	619	619		16.473	3.514	1	68803			17666	9785	11895	11904	20397	20397					0.15530201921092157
ILKIVIFSFE	10	Unmodified	_ILKIVIFSFE_					0	0	0		ENST00000507917.5_1_4:44704963-44705026:-|nuORF	ENST00000507917.5_1_4:44704963-44705026:-|nuORF	ENST00000507917.5_1_4:44704963-44705026:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8677368164062	2	604.8681	1207.72165	3.1994	0.0019352	-3.0654	-0.0018541	0.134	8.1054E-05	604.8663317043117	116.05	1.2157	116.03	115.77	116.99	-0.02433					49	39	2	0	0	0	0.88945	1	12955	12955		10.866	0.6003	1	83492			17667	12966	11896	11905	20398	20398					0.12609492273486467
ILKKASFNMEV	11	Unmodified	_ILKKASFNMEV_					0	0	0		ENSG00000198798|ENST00000361644|MAGEB3	ENSG00000198798|ENST00000361644|MAGEB3	ENSG00000198798|ENST00000361644|MAGEB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3593139648438	2	640.357573	1278.70059	-1.1585	-0.00074183	3.0988	0.0019844	1.9404	0.0012425	640.3594398218631	99.341	2.5092	99.527	98.68	101.19	0.18581					187	58	4	0	0	0	0.60058	1	10316	10316		44.377	10.456	1	585260			17668	8338	11897	11906	20399	20399					0.07239158902348208
ILKKKLAFL	9	Unmodified	_ILKKKLAFL_					0	0	0		ENST00000486468.1_1_2:180027226-180056568:-|nuORF;ENSG00000187231|ENST00000428443|SESTD1	ENST00000486468.1_1_2:180027226-180056568:-|nuORF	ENST00000486468.1_1_2:180027226-180056568:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.38134765625	2	537.375895	1072.73724	4.7396	0.002547	1.4877	0.00079943	6.2273	0.0033464	537.3767610206152	109	0.41099	109.09	108.87	109.28	0.090057					37	17	3	0	0	0	0.7932	1	13268	13268		8.8223	0.59103	1	1515000			17669	7848	11898	11907	20400	20400					0.2037782358122513
ILKLIVRRR	9	Unmodified	_ILKLIVRRR_					0	0	0		ENSG00000158352|ENST00000376020|SHROOM4	ENSG00000158352|ENST00000376020|SHROOM4	ENSG00000158352|ENST00000376020|SHROOM4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.3766479492188	2	583.914042	1165.81353	-1.9817	-0.0011571	-2.3961	-0.0013991	-4.3777	-0.0025562	583.9123310102032	41.557	0.14802	42.191	42.06	42.208	0.6339					6	3	2	0	0	0	0.20789	1	3649	3649		10.866	0	1	244730			17670	5473	11899	11908	20401	20401					0.2372564020122354
ILKLTQTSPPL	11	Unmodified	_ILKLTQTSPPL_					0	0	0			REV__nc|ENSG00000165409|P16473|TSHR	REV__nc|ENSG00000165409|P16473|TSHR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.8718872070312	2	605.873914	1209.73327	-0.46872	-0.00028398	-2.5451	-0.001542	-3.0138	-0.001826	605.8722201329331	100.48	2.0532	100.52	100	102.06	0.039742					113	47	4	0	0	0	0.72739	1	10738	10738		27.047	1.4733	1	1745000	+		17671	21181	11900	11909	20402	20402					0.13679689296850484
ILKLWKAWGD	10	Unmodified	_ILKLWKAWGD_					0	0	0		ENSG00000198774|ENST00000361228|RASSF9	ENSG00000198774|ENST00000361228|RASSF9	ENSG00000198774|ENST00000361228|RASSF9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.3587036132812	2	615.355691	1228.69683	1.2106	0.00074497	1.8027	0.0011093	3.0133	0.0018543	615.3568978915573	104.33	3.2029	104.5	103.73	106.93	0.17096					209	79	4	0	0	0	0.85934	1	11157	11157		35.618	0	1	3137500			17672	8329	11901	11910	20403	20403					0.09162857190767681
ILKNEIKCLPP	11	Unmodified	_ILKNEIKCLPP_					0	0	0		ENSG00000115548|ENST00000312912|KDM3A;ENST00000441719.5_1_2:86707325-86709823:+|nuORF	ENSG00000115548|ENST00000312912|KDM3A	ENSG00000115548|ENST00000312912|KDM3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3767700195312	2	634.375766	1266.73698	1.3188	0.00083664	1.2393	0.0007862	2.5582	0.0016228	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.69995	1	12977	12977		31.53	2.3803	1	12917000			17673	2854	11902	11911	20404	20404					0.1142803579905376
ILKNFFRG	8	Unmodified	_ILKNFFRG_					0	0	0		ENST00000511203.1_1_4:100869836-100870579:-|nuORF	ENST00000511203.1_1_4:100869836-100870579:-|nuORF	ENST00000511203.1_1_4:100869836-100870579:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.79620361328125	2	497.795269	993.575986	-0.62564	-0.00031144	1.9566	0.00097397	1.3309	0.00066253	497.7959662701911	48.367	0.7753	48.389	47.898	48.674	0.02227					49	20	3	0	0	0	0.86288	1	3700	3700		26.796	0	1	392340			17674	13015	11903	11912	20405	20405					0.0789407426799471
ILKNICLAS	9	Unmodified	_ILKNICLAS_					0	0	0		ENST00000547055.1_2_12:70178596-70178761:+|nuORF	ENST00000547055.1_2_12:70178596-70178761:+|nuORF	ENST00000547055.1_2_12:70178596-70178761:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.79071044921875	2	487.788795	973.563038	0.64552	0.00031488	3.0925	0.0015085	3.738	0.0018234	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.72402	1	8176	8176		38.806	8.3025	1	1929300			17675	13597	11904	11913	20406	20406					0.07519875093578321
ILKPPFPPI	9	Unmodified	_ILKPPFPPI_					0	0	0		ENSG00000171199|ENST00000399575|OPRPN	ENSG00000171199|ENST00000399575|OPRPN	ENSG00000171199|ENST00000399575|OPRPN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.3271179199219	2	511.325871	1020.63719	-0.052166	-2.6674E-05	2.488	0.0012722	2.4358	0.0012455	511.3270422766062	97.471	2.3305	97.527	97.032	99.363	0.056839					141	53	4	0	0	0	0.7932	2	10307	10307;10332		19.36	3.7238	1	1704400			17676	6644	11905	11914	20407;20408	20407					0.12769586247418374
ILKPPFPPI	9	Unmodified	_ILKPPFPPI_					0	0	0		ENSG00000171199|ENST00000399575|OPRPN	ENSG00000171199|ENST00000399575|OPRPN	ENSG00000171199|ENST00000399575|OPRPN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.32757568359375	2	511.325871	1020.63719	0.52338	0.00026762	1.9285	0.00098609	2.4519	0.0012537	511.3267559398498	97.201	2.4372	97.249	96.783	99.22	0.048157					148	56	4	0	0	0	0.7932	2	10392	10392;10404		13.775	4.3048	1	1880900			17677	6644	11905	11914	20409;20410	20409					0.12769586247418374
ILKPRPLWTG	10	Unmodified	_ILKPRPLWTG_					0	0	0		nc|ENSG00000181222|P24928|POLR2A;ENSG00000181222|ENST00000674977|POLR2A	nc|ENSG00000181222|P24928|POLR2A	nc|ENSG00000181222|P24928|POLR2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.866943359375	2	590.863683	1179.71281	3.3796	0.0019969	0.94842	0.00056039	4.328	0.0025573	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.86589	1	11301	11301		29.15	1.0681	1	52150000			17678	7377	11906	11915	20411	20411					0.13014563427691428
ILKPRPLWTG	10	Unmodified	_ILKPRPLWTG_					0	0	0		nc|ENSG00000181222|P24928|POLR2A;ENSG00000181222|ENST00000674977|POLR2A	nc|ENSG00000181222|P24928|POLR2A	nc|ENSG00000181222|P24928|POLR2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8670654296875	2	590.863683	1179.71281	1.3812	0.0008161	3.8747	0.0022894	5.2559	0.0031055	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.74274	1	12520	12520		42.396	4.5846	1	6168400			17679	7377	11906	11915	20412	20412					0.13014563427691428
ILKQHLKKKE	10	Unmodified	_ILKQHLKKKE_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	632.9136352539062	2	632.908622	1263.80269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.151	1	20.226	19.726	20.726	0.075848								0	0	0	0.45132	1	476	476		19.104	2.3861	1		+		17680	21882	11907	11916	20413	20413					0.18134193036257784
ILKQREEQTG	10	Unmodified	_ILKQREEQTG_					0	0	0			REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.8578491210938	2	601.330402	1200.64625	-0.52257	-0.00031424	-1.2452	-0.0007488	-1.7678	-0.001063	601.3274217241922	103.64	0.55608	103.63	103.35	103.91	-0.0035782					17	13	2	0	0	0	0.37624	1	11178	11178		30.318	14.311	1	238240	+		17681	29809	11908	11917	20414	20414					0.05395283075131374
ILKRLPRKLD	10	Unmodified	_ILKRLPRKLD_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.92236328125	3	417.946835	1250.81868	2.7172	0.0011357	1.7423	0.00072817	4.4595	0.0018638	417.94823049502907	105.77	0.40852	105.73	105.41	105.82	-0.03714					14	9	2	0	0	0	0.37624	1	11626	11626		7.3997	3.0609	1	109590			17682	3299	11909	11918	20415	20415					0.20329899273178853
ILKRLPRKLD	10	Unmodified	_ILKRLPRKLD_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92218017578125	3	417.946835	1250.81868	-1.8944	-0.00079174	0.0063557	2.6563E-06	-1.888	-0.00078908	417.9468462009209	105.63	0.30726	105.7	105.53	105.84	0.073112					12	7	2	0	0	0	0.37624	1	11189	11189		15.333	6.1213	1	44852			17683	3299	11909	11918	20416	20416					0.20329899273178853
ILKRNPNVNLT	11	Unmodified	_ILKRNPNVNLT_					0	0	0		ENST00000471275.1_1_2:8940499-8946457:-|nuORF;nc|ENSG00000134313|Q9ULH0-3|KIDINS220;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;nc|ENSG00000134313|Q9ULH0-4|KIDINS220;ENSG00000134313|ENST00000256707|KIDINS220	ENST00000471275.1_1_2:8940499-8946457:-|nuORF	ENST00000471275.1_1_2:8940499-8946457:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.3838500976562	2	641.385511	1280.75647	1.6005	0.0010265	-3.2502	-0.0020846	-1.6497	-0.0010581	641.3830342191151	102.5	1.0016	102.69	102.29	103.29	0.19484					61	24	4	0	0	0	0.72106	1	10796	10796		28.081	3.5623	1	1516700			17684	3927	11910	11919	20417	20417					0.12732128134166487
ILKRPIKPK	9	Unmodified	_ILKRPIKPK_					0	0	0			REV__ENST00000269187.9_2_18:33689014-33689293:-|nuORF	REV__ENST00000269187.9_2_18:33689014-33689293:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8399047851562	2	546.884419	1091.75428	-0.5004	-0.00027366	-2.2673	-0.0012399	-2.7677	-0.0015136	546.8830338423542	101.14	0.33817	101.14	100.91	101.24	0					9	7	2	0	0	0	0.20789	1	10275	10275		25.45	8.0852	1	35392	+		17685	24519	11911	11920	20418	20418					0.2120774418704059
ILKRPIKPK	9	Unmodified	_ILKRPIKPK_					0	0	0			REV__ENST00000269187.9_2_18:33689014-33689293:-|nuORF	REV__ENST00000269187.9_2_18:33689014-33689293:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.83984375	2	546.884419	1091.75428	-1.4624	-0.00079974	-1.305	-0.00071366	-2.7673	-0.0015134	546.88301445093	100.65	0.21224	100.82	100.72	100.94	0.17199					5	4	2	0	0	0	0.20789	1	10477	10477		17.365	10.172	1	25058	+		17686	24519	11911	11920	20419	20419					0.2120774418704059
ILKRRLYRGLF	11	Unmodified	_ILKRRLYRGLF_					0	0	0			REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9747314453125	3	478.973384	1433.89832	-0.59952	-0.00028715	3.054	0.0014628	2.4545	0.0011756	479.30919988874916	53.475	3.0495	53.45	51.564	54.614	-0.02475					117	77	2	0	0	0	0.80361	1	4678	4678		10.587	1.375	1	217940	+		17687	16548	11912	11921	20420	20420					0.19872965947138255
ILKRRLYRGLF	11	Unmodified	_ILKRRLYRGLF_					0	0	0			REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97381591796875	3	478.973384	1433.89832	0.26149	0.00012524	1.5738	0.00075381	1.8353	0.00087905	478.9741674058618	42.954	1.6917	43.019	42.201	43.892	0.065037					93	45	3	0	0	0	0.76579	1	2966	2966		18.531	1.3643	1	530890	+		17688	16548	11912	11921	20421	20421					0.19872965947138255
ILKRRLYRGLF	11	Unmodified	_ILKRRLYRGLF_					0	0	0			REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.30938720703125	3	478.973384	1433.89832	0.32204	0.00015425	2.3016	0.0011024	2.6237	0.0012567	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.76892	2	3815	3815;3950		17.833	3.4443	1	307830	+		17689	16548	11912	11921	20422;20423	20422					0.19872965947138255
ILKRRLYRGLF	11	Unmodified	_ILKRRLYRGLF_					0	0	0			REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3081359863281	3	478.973384	1433.89832	0.34157	0.0001636	2.1071	0.0010093	2.4487	0.0011729	478.9743151753571	51.804	1.1678	51.863	51.373	52.541	0.059719					70	37	2	0	0	0	0.84494	1	4125	4125		6.3209	0.6221	1	347520	+		17690	16548	11912	11921	20424	20424					0.19872965947138255
ILKRRLYRGLF	11	Unmodified	_ILKRRLYRGLF_					0	0	0			REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3081970214844	3	478.973384	1433.89832	-0.41434	-0.00019846	3.0207	0.0014469	2.6064	0.0012484	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.78683	1	4360	4360		14.086	5.2867	1	341610	+		17691	16548	11912	11921	20425	20425					0.19872965947138255
ILKRVAANALM	11	Unmodified	_ILKRVAANALM_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;ENST00000583043.5_1_18:67684852-67806940:-|nuORF	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.5805358886719	3	400.581276	1198.722	-1.9294	-0.00077288	0.34825	0.0001395	-1.5811	-0.00063337	400.5812185024314	112.11	1.0204	112.09	111.8	112.82	-0.019882					97	31	4	0	0	0	0.70584	1	11990	11990		30.569	3.5215	1	9176900			17692	7065	11913	11922	20426	20426					0.1305858872169665
ILKRVSTTN	9	Unmodified	_ILKRVSTTN_					0	0	0			REV__nc|ENSG00000240891|Q0VAA5-2|PLCXD2	REV__nc|ENSG00000240891|Q0VAA5-2|PLCXD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3139038085938	2	516.314023	1030.61349	-0.047196	-2.4368E-05	-0.36182	-0.00018681	-0.40901	-0.00021118	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.77244	1	10905	10905		32.812	0.061884	1	63062000	+		17693	23818	11914	11923	20427	20427					0.0994112074295117
ILKSEILRKR	10	Unmodified	_ILKSEILRKR_					0	0	0		ENST00000417658.5_1_10:13629086-13633803:+|nuORF;nc|ENSG00000165630|Q99633-2|PRPF18;ENSG00000165630|ENST00000378572|PRPF18	ENST00000417658.5_1_10:13629086-13633803:+|nuORF	ENST00000417658.5_1_10:13629086-13633803:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	628.31494140625	2	628.414072	1254.81359	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.711	1	57.79	57.29	58.29	0.079643								0	0	0	0.45132	1	4891	4891		23.523	1.5628	1				17694	6102	11915	11924	20428	20428					0.19637595410563335
ILKSSSLVAKY	11	Unmodified	_ILKSSSLVAKY_					0	0	0			REV__ENST00000506793.5_1_4:44680541-44700695:+|nuORF	REV__ENST00000506793.5_1_4:44680541-44700695:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8619384765625	2	604.866089	1207.71762	3.1994	0.0019352	0.25996	0.00015724	3.4593	0.0020924	604.8663317043117	116.05	1.2157	116.03	115.77	116.99	-0.02433					49	39	2	0	0	0	0.70737	1	12949	12949		30.318	5.7985	1	83492	+		17695	20271	11916	11925	20429	20429					0.12207402779790755
ILKTDTGLKHK	11	Unmodified	_ILKTDTGLKHK_					0	0	0			REV__nc|ENSG00000132141|Q92526-2|CCT6B	REV__nc|ENSG00000132141|Q92526-2|CCT6B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.8837280273438	2	627.382437	1252.75032	-0.21901	-0.00013741	0.4198	0.00026338	0.20079	0.00012597	627.38251010406	118.49	0.49898	118.41	118.19	118.69	-0.07531					43	18	3	0	0	0	0.80516	1	12709	12709		10.265	0.5596	1	1699700	+		17696	18983	11917	11926	20430	20430					0.13405609902633842
ILKTPKQR	8	Unmodified	_ILKTPKQR_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.8253173828125	2	492.321651	982.62875	-0.75989	-0.00037411	-2.06	-0.0010142	-2.8198	-0.0013883	492.32056657313603	15.899	0.37498	15.947	15.788	16.163	0.047803					26	15	2	0	0	0	0.85277	1	85	85		25.45	1.2474	1	78070			17697	4237	11918	11927	20431	20431					0.136740323308004
ILKTVVNRDVP	11	Unmodified	_ILKTVVNRDVP_					0	0	0		ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3833618164062	2	627.382437	1252.75032	-1.2002	-0.000753	1.3364	0.00083845	0.1362	8.5448E-05	627.3830182520044	111.13	0.69723	111.12	110.53	111.23	-0.0074387					64	27	3	0	0	0	0.75921	1	11852	11852		19.997	1.7347	1	327620			17698	8526	11919	11928	20432	20432					0.1340560990265658
ILKYVDLTF	9	Unmodified	_ILKYVDLTF_					0	0	0			REV__ENSG00000198743|ENST00000381151|SLC5A3	REV__ENSG00000198743|ENST00000381151|SLC5A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.3232421875	2	556.323525	1110.6325	0.14744	8.2024E-05	-0.4483	-0.0002494	-0.30086	-0.00016738	556.3233391513363	78.46	1.0152	78.87	78.551	79.566	0.41059					67	23	4	0	0	0	0.51307	1	8967	8967		51.335	1.8939	1	1360600	+		17699	23372	11920	11929	20433	20433					0.08160657313965203
ILKYVDLTF	9	Unmodified	_ILKYVDLTF_					0	0	0			REV__ENSG00000198743|ENST00000381151|SLC5A3	REV__ENSG00000198743|ENST00000381151|SLC5A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.3235473632812	2	556.323525	1110.6325	-0.15445	-8.5927E-05	-0.069287	-3.8546E-05	-0.22374	-0.00012447	556.323468299225	78.361	0.88347	78.925	78.618	79.502	0.56332					61	20	4	0	0	0	0.38563	2	8981	8969;8981		58.782	4.0173	1	1541900	+		17700	23372	11920	11929	20434;20435	20435					0.08160657313965203
ILKYVDLTF	9	Unmodified	_ILKYVDLTF_					0	0	0			REV__ENSG00000198743|ENST00000381151|SLC5A3	REV__ENSG00000198743|ENST00000381151|SLC5A3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	556.323525	1110.6325	0.14744	8.2024E-05	-0.4483	-0.0002494	-0.30086	-0.00016738	556.3233391513363	78.46	1.0152	78.87	78.551	79.566	0.41059	-0.027206	-0.00025821	NaN	58.782	67	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1360600	+		17701	23372	11920	11929							0.08160657313965203
ILKYVDLTF	9	Unmodified	_ILKYVDLTF_					0	0	0			REV__ENSG00000198743|ENST00000381151|SLC5A3	REV__ENSG00000198743|ENST00000381151|SLC5A3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	556.323525	1110.6325	-0.15445	-8.5927E-05	-0.069287	-3.8546E-05	-0.22374	-0.00012447	556.323468299225	78.361	0.88347	78.925	78.618	79.502	0.56332	0.027206	0.0001635	NaN	58.782	61	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1541900	+		17702	23372	11920	11929							0.08160657313965203
ILLALLCCL	9	Unmodified	_ILLALLCCL_					0	0	0			REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7911376953125	2	487.792492	973.570431	-0.98777	-0.00048183	-2.335	-0.001139	-3.3228	-0.0016208	487.7914154704245	97.284	1.3171	97.332	96.827	98.144	0.048157					64	30	3	0	0	0	0.72098	1	10358	10358		39.021	3.8208	1	415160	+		17703	28098	11921	11930	20436	20436					0.08258891369644061
ILLALLCCL	9	Unmodified	_ILLALLCCL_					0	0	0			REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	487.792492	973.570431	-0.86144	-0.0004202	-2.6309	-0.0012833	-3.4923	-0.0017035	487.7912367008837	97.667	0.81349	97.667	97.293	98.106	0	0.21937	0.0010899	NaN	39.021	40	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	204420	+		17704	28098	11921	11930							0.08258891369644061
ILLALLCCL	9	Unmodified	_ILLALLCCL_					0	0	0			REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	487.792492	973.570431	2.2834	0.0011138	-5.445	-0.002656	-3.1616	-0.0015422	487.78982512509754	97.459	1.2236	97.404	96.932	98.156	-0.05555	-0.044378	-0.0016555	NaN	39.021	62	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	455240	+		17705	28098	11921	11930							0.08258891369644061
ILLALLCCL	9	Unmodified	_ILLALLCCL_					0	0	0			REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	487.792492	973.570431	-0.98777	-0.00048183	-2.335	-0.001139	-3.3228	-0.0016208	487.7914154704245	97.284	1.3171	97.332	96.827	98.144	0.048157	-0.11623	0.0013786	NaN	39.021	64	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	415160	+		17706	28098	11921	11930							0.08258891369644061
ILLALLCCL	9	Unmodified	_ILLALLCCL_					0	0	0			REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	487.792492	973.570431	-0.68394	-0.00033362	-2.7767	-0.0013545	-3.4607	-0.0016881	487.79125917413666	97.101	1.0437	97.332	96.999	98.042	0.23103	-0.11596	0.00094761	NaN	39.021	51	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	308540	+		17707	28098	11921	11930							0.08258891369644061
ILLALLCCL	9	Unmodified	_ILLALLCCL_					0	0	0			REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	487.792492	973.570431	0.7596	0.00037053	-4.2957	-0.0020954	-3.5361	-0.0017249	487.7905512528304	97.278	0.9662	97.441	97.052	98.018	0.16316	-0.0068959	-0.00053433	NaN	39.021	46	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	242460	+		17708	28098	11921	11930							0.08258891369644061
ILLALLCCL	9	Unmodified	_ILLALLCCL_					0	0	0			REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	487.792492	973.570431	-1.6547	-0.00080716	-2.3684	-0.0011553	-4.0231	-0.0019624	487.7917088058772	97.25	1.1099	97.452	97.096	98.206	0.20207	0.0036301	0.001346	NaN	39.021	54	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	202870	+		17709	28098	11921	11930							0.08258891369644061
ILLALLCCL	9	Unmodified	_ILLALLCCL_					0	0	0			REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	487.792492	973.570431	1.2797	0.00062425	-6.6091	-0.0032239	-5.3294	-0.0025996	487.78912142127916	96.96	1.2333	97.365	96.759	97.993	0.40498	-0.082694	-0.0027912	NaN	39.021	52	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	430890	+		17710	28098	11921	11930							0.08258891369644061
ILLALLCCL	9	Unmodified	_ILLALLCCL_					0	0	0			REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	REV__ENST00000520311.5_1_8:101534829-101534865:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	487.792492	973.570431	0.91649	0.00044706	-5.6571	-0.0027595	-4.7406	-0.0023124	487.79007404573167	97.029	0.93814	97.42	97.115	98.053	0.39065	-0.028066	-0.0018624	NaN	39.021	47	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410910	+		17711	28098	11921	11930							0.08258891369644061
ILLAYRDLV	9	Unmodified	_ILLAYRDLV_					0	0	0			REV__ENST00000529206.1_1_14:95595738-95599795:-|nuORF	REV__ENST00000529206.1_1_14:95595738-95599795:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3276977539062	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.78124	1	12417	12417		30.318	1.1682	1	4041000	+		17712	28262	11922	11931	20437	20437					0.1093947940810267
ILLDLDWSA	9	Unmodified	_ILLDLDWSA_					0	0	0			REV__ENST00000446230.6_1_11:94278904-94308218:+|nuORF	REV__ENST00000446230.6_1_11:94278904-94308218:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3035278320312	2	523.281857	1044.54916	-1.0929	-0.00057189	0.2092	0.00010947	-0.88369	-0.00046242	523.2836377507995	88.611	0.2798	89.082	88.994	89.274	0.47068					8	6	2	0	0	0	0.20789	1	10498	10498		30.504	10.507	1	90934	+		17713	26803	11923	11932	20438	20438					0.028669208661540324
ILLEKEKLLHE	11	Unmodified	_ILLEKEKLLHE_					0	0	0			REV__nc|ENSG00000130695|Q6P2H3-4|CEP85	REV__nc|ENSG00000130695|Q6P2H3-4|CEP85	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6080017089844	3	455.609777	1363.8075	-1.1702	-0.00053316	-1.906	-0.00086837	-3.0762	-0.0014015	455.6088473881977	71.256	2.1835	71.333	70.628	72.811	0.076225					206	91	3	0	0	0	0.64964	1	6491	6491		38.714	10.137	1	589510	+		17714	18891	11924	11933	20439	20439					0.14015032388374493
ILLFLFFLLFW	11	Unmodified	_ILLFLFFLLFW_					0	0	0			REV__ENSG00000167972|ENST00000301732|ABCA3	REV__ENSG00000167972|ENST00000301732|ABCA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2985534667969	3	491.296582	1470.86792	2.8436	0.001397	2.2865	0.0011233	5.13	0.0025204	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.78085	1	13287	13287		15.333	5.2292	1	3274400	+		17715	21442	11925	11934	20440	20440					0.15131794509420615
ILLGIPET	8	Unmodified	_ILLGIPET_					0	0	0		nc|ENSG00000186268|Q8NGN7|OR10D4P	nc|ENSG00000186268|Q8NGN7|OR10D4P	nc|ENSG00000186268|Q8NGN7|OR10D4P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.2616271972656	2	428.262936	854.51132	0.64464	0.00027608	-3.646	-0.0015614	-3.0014	-0.0012854	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.87276	1	9139	9139		29.842	1.5873	1	40631000			17716	15157	11926	11935	20441	20441					0.0782445467133357
ILLGIPET	8	Unmodified	_ILLGIPET_					0	0	0		nc|ENSG00000186268|Q8NGN7|OR10D4P	nc|ENSG00000186268|Q8NGN7|OR10D4P	nc|ENSG00000186268|Q8NGN7|OR10D4P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.26153564453125	2	428.262936	854.51132	-1.8497	-0.00079216	-1.179	-0.00050492	-3.0287	-0.0012971	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.87276	1	9021	9021		29.842	1.5873	1	31323000			17717	15157	11926	11935	20442	20442					0.0782445467133357
ILLGKISVT	9	Unmodified	_ILLGKISVT_					0	0	0			REV__CON__Q1A7A4	REV__CON__Q1A7A4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2874755859375	2	472.312961	942.611368	-0.026793	-1.2655E-05	-0.45792	-0.00021628	-0.48471	-0.00022894	472.31233660209597	95.183	0.66029	95.23	94.877	95.537	0.046982					31	15	3	0	0	0	0.20789	1	10066	10066		24.203	8.5609	1	240570	+	+	17718	15998	11927	11936	20443	20443					0.13776692005137647
ILLGLEEL	8	Unmodified	_ILLGLEEL_					0	0	0		ENST00000273859.7_1_4:47593407-47593530:+|nuORF	ENST00000273859.7_1_4:47593407-47593530:+|nuORF	ENST00000273859.7_1_4:47593407-47593530:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.27447509765625	2	450.276044	898.537535	0.68452	0.00030823	-4.3919	-0.0019776	-3.7074	-0.0016694	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.89457	1	9529	9529		37.028	7.1869	1	41438000			17719	9582	11928	11937	20444	20444					0.08420723842812095
ILLGLFNHT	9	Unmodified	_ILLGLFNHT_					0	0	0		ENSG00000177462|ENST00000641945|OR2T8;ENSG00000177212|ENST00000641220|OR2T33;ENSG00000177201|ENST00000641276|OR2T12	ENSG00000177462|ENST00000641945|OR2T8	ENSG00000177462|ENST00000641945|OR2T8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.2979125976562	2	514.300384	1026.58622	-1.5684	-0.00080663	-3.1693	-0.00163	-4.7377	-0.0024366	514.2990007980452	96.402	2.2846	96.604	95.027	97.312	0.20242					111	53	3	0	0	0	0.78058	1	9880	9880		30.504	0	1	524360			17720	7129	11929	11938	20445	20445					0.07398637202550162
ILLGNGKH	8	Unmodified	_ILLGNGKH_					0	0	0		ENST00000351989.7_1_22:20077294-20077518:+|nuORF	ENST00000351989.7_1_22:20077294-20077518:+|nuORF	ENST00000351989.7_1_22:20077294-20077518:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2575378417969	2	426.25852	850.502486	0.79529	0.000339	-3.7264	-0.0015884	-2.9311	-0.0012494	426.2569520659769	34.417	1.2137	34.627	34.107	35.321	0.21002					70	29	4	0	0	0	0.89457	1	2552	2552		37.028	1.8278	1	1482400			17721	10323	11930	11939	20446	20446					0.07125525825529166
ILLGSFLISL	10	Unmodified	_ILLGSFLISL_					0	0	0		ENSG00000121381|ENST00000240691|TAS2R9	ENSG00000121381|ENST00000240691|TAS2R9	ENSG00000121381|ENST00000240691|TAS2R9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3270874023438	2	538.341718	1074.66888	0.07024	3.7813E-05	2.8078	0.0015116	2.8781	0.0015494	538.3429617837849	100.76	0.6898	100.97	100.63	101.32	0.2058					46	16	4	0	0	0	0.37624	1	10519	10519		23.042	0	1	1101100			17722	3180	11931	11940	20447	20447					0.13453534210702855
ILLGTKPMV	9	Oxidation (M)	_ILLGTKPM(Oxidation (M))V_		ILLGTKPM(1)V		ILLGTKPM(46)V	0	0	1			REV__ENSG00000268606|ENST00000684311|MAGEA2	REV__ENSG00000268606|ENST00000684311|MAGEA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.3008117675781	2	494.298996	986.583439	-0.074801	-3.6974E-05	3.5667	0.001763	3.4919	0.001726	494.30075143902303	97.483	4.0876	97.54	96.775	100.86	0.056839					393	94	6	0	0	0	0.62081	1	10329	10329		45.952	7.1458	1	54076000	+		17723	22594	11932	11941	20448	20448		341			0.08961045753403596
ILLGTVTKQF	10	Unmodified	_ILLGTVTKQF_					0	0	0			REV__nc|ENSG00000171587|O60469-2|DSCAM	REV__nc|ENSG00000171587|O60469-2|DSCAM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3392944335938	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.86272	1	12745	12745		24.519	1.9395	1	4071000	+		17724	21753	11933	11942	20449	20449					0.11535748579603933
ILLGVFFLSRS	11	Unmodified	_ILLGVFFLSRS_					0	0	0			REV__ENSG00000181016|ENST00000312849|LSMEM1	REV__ENSG00000181016|ENST00000312849|LSMEM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.379638671875	2	626.376623	1250.73869	4.8484	0.0030369	0.02649	1.6593E-05	4.8748	0.0030535	626.376538751344	105.56	2.7242	105.75	104.85	107.57	0.18647					224	90	4	0	0	0	0.68378	1	12833	12833		34.173	2.5383	1	2877800	+		17725	22435	11934	11943	20450	20450					0.123354128793153
ILLGYGEKR	9	Unmodified	_ILLGYGEKR_					0	0	0			REV__ENST00000472970.1_1_20:52789446-52789947:-|nuORF	REV__ENST00000472970.1_1_20:52789446-52789947:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8267211914062	2	524.811116	1047.60768	-0.039114	-2.0527E-05	0.11764	6.1738E-05	0.078525	4.1211E-05	524.810310212551	99.807	0.3384	99.848	99.752	100.09	0.041107					10	7	2	0	0	0	0.20789	1	10606	10606		47.916	3.7988	1	53131	+		17726	16228	11935	11944	20451	20451					0.08578022231290561
ILLIILVNI	9	Unmodified	_ILLIILVNI_					0	0	0		ENSG00000181785|ENST00000641320|OR5AS1	ENSG00000181785|ENST00000641320|OR5AS1	ENSG00000181785|ENST00000641320|OR5AS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.361083984375	2	512.362453	1022.71035	-0.36988	-0.00018951	-2.115	-0.0010836	-2.4848	-0.0012731	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.7932	1	7149	7149		18.324	0.95945	1	304520			17727	7403	11936	11945	20452	20452					0.1999071497003797
ILLILLHALG	10	Unmodified	_ILLILLHALG_					0	0	0			REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.326416015625	2	538.365527	1074.7165	0.83981	0.00045213	2.6188	0.0014099	3.4586	0.001862	538.3670079598979	101.49	0.16724	101.63	101.56	101.73	0.14352					5	3	2	0	0	0	0.37624	1	10642	10642		12.959	1.4482	1	56537	+		17728	29568	11937	11946	20453	20453					0.18213233201527146
ILLILLHALG	10	Unmodified	_ILLILLHALG_					0	0	0			REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	538.365527	1074.7165	1.2455	0.00067054	5.2516	0.0028273	6.4971	0.0034978	538.3686484196683	101.28	0.20573	101.32	101.14	101.34	0.044823	-0.15434	0.0027484	NaN	12.959	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77040	+		17729	29568	11937	11946							0.18213233201527146
ILLIPNFQHI	10	Unmodified	_ILLIPNFQHI_					0	0	0			REV__ENST00000555252.5_1_14:64855058-64907131:+|nuORF	REV__ENST00000555252.5_1_14:64855058-64907131:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3661499023438	2	604.363516	1206.71248	2.3603	0.0014265	2.8185	0.0017034	5.1787	0.0031298	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.86802	1	12770	12770		21.96	0	1	5984800	+		17730	28679	11938	11947	20454	20454					0.11739143707859512
ILLITIQD	8	Unmodified	_ILLITIQD_					0	0	0		nc|ENSG00000153930|Q8N957-2|ANKFN1;ENSG00000153930|ENST00000682825|ANKFN1;chr17:56477654-56480668|16|29.62|0.98|4.91|+|ENST00000653862|ANKFN1,ANKFN1;chr17:56466571-56477488|14|25.5|0.94|4.75|+|ENST00000653862|ANKFN1,ANKFN1;chr17:56442933-56449079|13|12.77|0.69|4.22|+|ENST00000653862|ANKFN1,ANKFN1;chr17:56350967-56353836|14|14.07|0.78|4.17|+|ENST00000653862|ANKFN1,ANKFN1	nc|ENSG00000153930|Q8N957-2|ANKFN1	nc|ENSG00000153930|Q8N957-2|ANKFN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7905578613281	2	464.789318	927.564084	-0.5794	-0.0002693	3.5758	0.001662	2.9964	0.0013927	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.80706	1	2259	2259		19.36	0	1	409180			17731	234	11939	11948	20455	20455					0.09740412734140591
ILLIYVLAM	9	Unmodified	_ILLIYVLAM_					0	0	0			REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.82666015625	2	524.827389	1047.64023	-0.63596	-0.00033377	-0.14994	-7.8693E-05	-0.7859	-0.00041246	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.78292	1	10376	10376		29.842	0.69198	1	15330000	+		17732	24825	11940	11949	20456	20456					0.11831093309933749
ILLIYVLAM	9	Unmodified	_ILLIYVLAM_					0	0	0			REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8256225585938	2	524.827389	1047.64023	-0.038995	-2.0466E-05	-0.94522	-0.00049608	-0.98421	-0.00051654	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.7932	1	10872	10872		14.664	1.7049	1	26414000	+		17733	24825	11940	11949	20457	20457					0.11831093309933749
ILLIYVLAM	9	Unmodified	_ILLIYVLAM_					0	0	0			REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.826416015625	2	524.827389	1047.64023	-0.038871	-2.04E-05	-0.051095	-2.6816E-05	-0.089966	-4.7217E-05	524.8272063900822	102.47	1.0685	102.49	101.99	103.06	0.01989					58	25	3	0	0	0	0.72098	2	10995	10931;10995		39.021	7.4917	1	402610	+		17734	24825	11940	11949	20458;20459	20459					0.11831093309933749
ILLIYVLAM	9	Unmodified	_ILLIYVLAM_					0	0	0			REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8275146484375	2	524.827389	1047.64023	1.241	0.00065132	-1.4252	-0.00074797	-0.18416	-9.6653E-05	524.8265446316465	102.17	1.0632	102.22	101.85	102.91	0.04319					53	25	3	0	0	0	0.7932	1	11033	11033		21.702	0	1	396530	+		17735	24825	11940	11949	20460	20460					0.11831093309933749
ILLIYVLAM	9	Unmodified	_ILLIYVLAM_					0	0	0			REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8275756835938	2	524.827389	1047.64023	-0.12962	-6.8027E-05	0.1389	7.2898E-05	0.0092808	4.8708E-06	524.8273126123019	102.03	1.1787	102.23	101.8	102.98	0.19483					72	28	3	0	0	0	0.72098	1	10749	10749		39.021	3.8208	1	693200	+		17736	24825	11940	11949	20461	20461					0.11831093309933749
ILLIYVLAM	9	Unmodified	_ILLIYVLAM_					0	0	0			REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	525.30908203125	2	524.827389	1047.64023	-0.12966	-6.805E-05	-0.0035881	-1.8831E-06	-0.13325	-6.9933E-05	524.8272566313465	104.38	1.0421	104.55	103.97	105.01	0.17095					65	25	3	0	0	0	0.20789	1	11008	11008		29.842	0	1	324930	+		17737	24825	11940	11949	20462	20462					0.11831093309933749
ILLIYVLAM	9	Unmodified	_ILLIYVLAM_					0	0	0			REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8270263671875	2	524.827389	1047.64023	0.8139	0.00042716	-1.7535	-0.00092028	-0.93959	-0.00049312	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.7932	1	10669	10669		21.702	2.3424	1	27719000	+		17738	24825	11940	11949	20463	20463					0.11831093309933749
ILLIYVLAM	9	Unmodified	_ILLIYVLAM_					0	0	0			REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	REV__ENST00000305963.2_1_X:135046992-135047052:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8270263671875	2	524.827389	1047.64023	-1.5341	-0.00080515	0.58375	0.00030637	-0.95038	-0.00049879	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.78292	1	10197	10197		29.842	0.69198	1	23918000	+		17739	24825	11940	11949	20464	20464					0.11831093309933749
ILLKDIIY	8	Unmodified	_ILLKDIIY_					0	0	0		ENSG00000197748|ENST00000357060|CFAP43;nc|ENSG00000197748|Q8NDM7-2|CFAP43	ENSG00000197748|ENST00000357060|CFAP43	ENSG00000197748|ENST00000357060|CFAP43	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	495.8168029785156	2	495.815336	989.616119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.863	1	24.921	24.421	25.421	0.058167								0	0	0	0.30784	1	882	882		14.664	1.7049	1				17740	8194	11941	11950	20465	20465					0.12089576147889147
ILLKKTSA	8	Unmodified	_ILLKKTSA_					0	0	0			REV__ENST00000488010.5_1_3:69097293-69097338:-|nuORF	REV__ENST00000488010.5_1_3:69097293-69097338:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.77471923828125	2	437.292028	872.569503	2.1289	0.00093097	-3.4794	-0.0015215	-1.3505	-0.00059056	437.2910992311345	90.647	0.19566	90.693	90.555	90.751	0.046448					6	4	2	0	0	0	0.4196	1	9407	9407		25.45	4.9683	1	78311	+		17741	27588	11942	11951	20466	20466					0.12812136316608758
ILLKKTSA	8	Unmodified	_ILLKKTSA_					0	0	0			REV__ENST00000488010.5_1_3:69097293-69097338:-|nuORF	REV__ENST00000488010.5_1_3:69097293-69097338:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	437.292028	872.569503	1.4346	0.00062736	-7.0673	-0.0030905	-5.6327	-0.0024631	437.28892795749647	91.044	0.19646	90.977	90.839	91.036	-0.067085	0.14177	-0.0018694	NaN	25.45	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83069	+		17742	27588	11942	11951							0.12812136316608758
ILLKKYLM	8	Unmodified	_ILLKKYLM_					0	0	0		ENSG00000101306|ENST00000375985|MYLK2	ENSG00000101306|ENST00000375985|MYLK2	ENSG00000101306|ENST00000375985|MYLK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.3272399902344	2	511.327556	1020.64056	-0.052165	-2.6674E-05	-0.80814	-0.00041323	-0.86031	-0.0004399	511.3270422766062	97.471	2.3305	97.527	97.032	99.363	0.056839					141	53	4	0	0	0	0.82464	1	10259	10259		21.702	0	1	1704400			17743	1927	11943	11952	20467	20467					0.13106513029765665
ILLKKYLM	8	Unmodified	_ILLKKYLM_					0	0	0		ENSG00000101306|ENST00000375985|MYLK2	ENSG00000101306|ENST00000375985|MYLK2	ENSG00000101306|ENST00000375985|MYLK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.3273010253906	2	511.327556	1020.64056	0.7825	0.00040011	-1.635	-0.000836	-0.85247	-0.00043589	511.32659948169965	97.129	2.2022	97.292	96.878	99.081	0.16316					131	50	4	0	0	0	0.81724	2	10041	10041;10053		14.664	2.4572	1	1350400			17744	1927	11943	11952	20468;20469	20468					0.13106513029765665
ILLKLAKFK	9	Unmodified	_ILLKLAKFK_					0	0	0		ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2	ENSG00000138346|ENST00000358410|DNA2	ENSG00000138346|ENST00000358410|DNA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.3793334960938	2	537.375895	1072.73724	3.5358	0.0019001	2.8681	0.0015413	6.4039	0.0034413	537.3774099102002	109.05	0.48517	109.03	108.73	109.21	-0.029381					47	18	3	0	0	0	0.7932	3	12102	12083;12102;12111		13.775	0.75233	1	3929900			17745	4288	11944	11953	20470;20471;20472	20471					0.2037782358122513
ILLKLAKFK	9	Unmodified	_ILLKLAKFK_					0	0	0		ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2	ENSG00000138346|ENST00000358410|DNA2	ENSG00000138346|ENST00000358410|DNA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.3796997070312	2	537.375895	1072.73724	4.7396	0.002547	1.4877	0.00079943	6.2273	0.0033464	537.3767610206152	109	0.41099	109.09	108.87	109.28	0.090057					37	17	3	0	0	0	0.7932	3	13261	13261;13275;13283		19.36	5.5846	1	1515000			17746	4288	11944	11953	20473;20474;20475	20473					0.2037782358122513
ILLKLAKFK	9	Unmodified	_ILLKLAKFK_					0	0	0		ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2	ENSG00000138346|ENST00000358410|DNA2	ENSG00000138346|ENST00000358410|DNA2	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	537.375895	1072.73724	-0.52114	-0.00028005	7.0852	0.0038074	6.564	0.0035274	537.3795790811613	108.85	0.39879	108.85	108.68	109.08	0	-0.17524	0.0027059	NaN	19.36	29	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	550740			17747	4288	11944	11953							0.2037782358122513
ILLKLAKFK	9	Unmodified	_ILLKLAKFK_					0	0	0		ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2	ENSG00000138346|ENST00000358410|DNA2	ENSG00000138346|ENST00000358410|DNA2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	537.375895	1072.73724	-1.4933	-0.00080247	7.8238	0.0042043	6.3305	0.0034018	537.379973756811	109.01	0.38526	109.03	108.81	109.19	0.020561	0.0012829	0.0034997	NaN	19.36	33	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1511300			17748	4288	11944	11953							0.2037782358122513
ILLKRFLVIV	10	Unmodified	_ILLKRFLVIV_					0	0	0		ENST00000263734.4_1_2:46612121-46612232:+|nuORF	ENST00000263734.4_1_2:46612121-46612232:+|nuORF	ENST00000263734.4_1_2:46612121-46612232:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.1759948730469	3	405.284677	1212.8322	1.5527	0.00062931	-0.69081	-0.00027997	0.86194	0.00034933	405.284116358905	99.116	1.028	99.479	98.727	99.755	0.36292					32	25	2	0	0	0	0.37624	1	12004	12004		4.6126	0	1	503090			17749	9464	11945	11954	20476	20476					0.23429757052394962
ILLKVHEPN	9	Unmodified	_ILLKVHEPN_					0	0	0			REV__nc|ENSG00000119509|Q9Y283-2|INVS	REV__nc|ENSG00000119509|Q9Y283-2|INVS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8170166015625	2	531.818941	1061.62333	-0.7527	-0.0004003	-3.1029	-0.0016502	-3.8556	-0.0020505	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.78983	1	8468	8468		27.882	1.1893	1	2790600	+		17750	18355	11946	11955	20477	20477					0.09498308748334239
ILLKVHEPN	9	Unmodified	_ILLKVHEPN_					0	0	0			REV__nc|ENSG00000119509|Q9Y283-2|INVS	REV__nc|ENSG00000119509|Q9Y283-2|INVS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8165893554688	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.78536	1	8879	8879		29.15	4.6304	1	4208000	+		17751	18355	11946	11955	20478	20478					0.09498308748334239
ILLKVHEPN	9	Unmodified	_ILLKVHEPN_					0	0	0			REV__nc|ENSG00000119509|Q9Y283-2|INVS	REV__nc|ENSG00000119509|Q9Y283-2|INVS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.81640625	2	531.818941	1061.62333	-0.69524	-0.00036974	-3.1977	-0.0017006	-3.8929	-0.0020703	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.71772	1	10207	10207		39.253	5.0803	1	1296000	+		17752	18355	11946	11955	20479	20479					0.09498308748334239
ILLLAPQT	8	Unmodified	_ILLLAPQT_					0	0	0			REV__nc|nan|Q8WUR7-3|C15orf40	REV__nc|nan|Q8WUR7-3|C15orf40	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.2851867675781	2	434.778754	867.542954	0.62535	0.00027189	2.2611	0.00098306	2.8864	0.0012549	434.77966055046767	57.02	3.6636	57.575	56.537	60.201	0.55513					134	89	2	0	0	0	0.4196	1	5926	5926		26.796	1.3459	1	401240	+		17753	30327	11947	11956	20480	20480					0.10388447425293634
ILLLDLLN	8	Unmodified	_ILLLDLLN_					0	0	0			REV__ENST00000494593.1_1_11:67353853-67354045:+|nuORF	REV__ENST00000494593.1_1_11:67353853-67354045:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8003845214844	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.82658	1	3518	3518		21.96	3.6355	1	1516700	+		17754	16871	11948	11957	20481	20481					0.11905003113815837
ILLLDTVEDPR	11	Unmodified	_ILLLDTVEDPR_					0	0	0		ENST00000375254.7_1_1:19500035-19500110:-|nuORF	ENST00000375254.7_1_1:19500035-19500110:-|nuORF	ENST00000375254.7_1_1:19500035-19500110:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.3643798828125	2	642.36391	1282.71327	-1.1501	-0.00073879	-1.5474	-0.00099397	-2.6975	-0.0017328	642.364177403599	111.36	0.50385	111.34	111.22	111.72	-0.019882					60	18	5	0	0	0	0.6921	1	11882	11882		32.812	3.6424	1	9278200			17755	10795	11949	11958	20482	20482					0.08321893566221661
ILLLFWVSYVT	11	Unmodified	_ILLLFWVSYVT_					0	0	0		nc|ENSG00000169507|Q08AI6-2|SLC38A11;nc|ENSG00000169507|Q08AI6|SLC38A11;ENSG00000169507|ENST00000685975|SLC38A11	nc|ENSG00000169507|Q08AI6-2|SLC38A11	nc|ENSG00000169507|Q08AI6-2|SLC38A11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.26983642578125	3	451.93208	1352.77441	0.75363	0.00034059	0.57344	0.00025916	1.3271	0.00059975	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.78683	1	10634	10634		14.086	0.57807	1	952120			17756	6500	11950	11959	20483	20483					0.11213450336299502
ILLLKVKW	8	Unmodified	_ILLLKVKW_					0	0	0			REV__chr7:32751473-32753206|53|23.53|0.0|21.17|+|0|TE_info:L1M5,L1M5_dup22794,L1,LINE,donor,+,32751355,32751473|None,ZNRF2P1|1	REV__chr7:32751473-32753206|53|23.53|0.0|21.17|+|0|TE_info:L1M5,L1M5_dup22794,L1,LINE,donor,+,32751355,32751473|None,ZNRF2P1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.85308837890625	2	506.849513	1011.68447	2.9544	0.0014974	3.5098	0.001779	6.4643	0.0032764	506.8513545717974	109.11	0.58002	109.08	108.69	109.27	-0.029381					38	23	2	0	0	0	0.81548	1	12108	12108		20.482	3.1169	1	2379200	+		17757	15907	11951	11960	20484	20484					0.17909865518413426
ILLLLCVAVC	10	Unmodified	_ILLLLCVAVC_					0	0	0		ENSG00000149968|ENST00000299855|MMP3	ENSG00000149968|ENST00000299855|MMP3	ENSG00000149968|ENST00000299855|MMP3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	529.7801513671875	2	530.318874	1058.6232	-0.86307	-0.0004577	-0.21134	-0.00011208	-1.0744	-0.00056978	530.8207786268276	82.205	0.38625	82.205	81.965	82.351	0					12	9	2	0	0	0	0.37624	1	7641	7641		26.796	0	1	30244			17758	5056	11952	11961	20485	20485					0.0962284943245777
ILLLLLLTT	9	Unmodified	_ILLLLLLTT_					0	0	0		ENST00000397573.5_1_15:40398252-40398620:-|nuORF	ENST00000397573.5_1_15:40398252-40398620:-|nuORF	ENST00000397573.5_1_15:40398252-40398620:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.85235595703125	2	506.854461	1011.69437	0.202	0.00010239	-3.347	-0.0016964	-3.145	-0.0015941	506.8527847339341	109	0.51282	109.04	108.78	109.29	0.034355					43	24	2	0	0	0	0.7932	2	11984	11984;11991		20.482	7.5226	1	2352800			17759	11154	11953	11962	20486;20487	20486					0.18899008733114897
ILLLRMPLQL	10	Unmodified	_ILLLRMPLQL_					0	0	0		ENST00000526600.1_1_11:12961012-12961237:+|nuORF	ENST00000526600.1_1_11:12961012-12961237:+|nuORF	ENST00000526600.1_1_11:12961012-12961237:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.93017578125	3	403.929905	1208.76789	-1.7749	-0.00071695	1.1305	0.00045664	-0.64445	-0.00026031	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.85834	1	3644	3644		22.58	2.5492	1	2526100			17760	13261	11954	11963	20488	20488					0.17185233903956032
ILLLTGSK	8	Unmodified	_ILLLTGSK_					0	0	0			REV__ENST00000526597.5_1_11:76637657-76637702:+|nuORF	REV__ENST00000526597.5_1_11:76637657-76637702:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.77392578125	2	422.778754	843.542954	0.47717	0.00020174	0.30341	0.00012828	0.78058	0.00033001	422.7788108074025	16.453	0.27537	15.855	15.694	15.97	-0.59873					9	5	2	0	0	0	0.4196	1	119	119		21.96	15.224	1	63092	+		17761	28212	11955	11964	20489	20489					0.1149244742529163
ILLLTGSK	8	Unmodified	_ILLLTGSK_					0	0	0			REV__ENST00000526597.5_1_11:76637657-76637702:+|nuORF	REV__ENST00000526597.5_1_11:76637657-76637702:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	422.778754	843.542954	-0.40521	-0.00017131	0.99541	0.00042084	0.5902	0.00024952	422.778939979372	16.284	0.31081	16.204	16.123	16.434	-0.080017	0.18997	0.00037059	NaN	15.642	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59393	+		17762	28212	11955	11964							0.1149244742529163
ILLLTGSK	8	Unmodified	_ILLLTGSK_					0	0	0			REV__ENST00000526597.5_1_11:76637657-76637702:+|nuORF	REV__ENST00000526597.5_1_11:76637657-76637702:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	422.778754	843.542954	0.84138	0.00035572	-0.27175	-0.00011489	0.56963	0.00024083	422.7785343793422	16.47	0.18478	15.983	15.867	16.052	-0.48718	-0.030957	-0.00070087	NaN	15.642	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51512	+		17763	28212	11955	11964							0.1149244742529163
ILLMFGPAI	9	Unmodified	_ILLMFGPAI_					0	0	0		ENSG00000279408|ENST00000623441|OR4N4C;ENSG00000183706|ENST00000328795|OR4N4	ENSG00000279408|ENST00000623441|OR4N4C	ENSG00000279408|ENST00000623441|OR4N4C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.790771484375	2	487.790807	973.56706	-0.71211	-0.00034736	0.059777	2.9159E-05	-0.65234	-0.0003182	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.78292	1	7841	7841		29.842	0	1	678280			17764	7552	11956	11965	20490	20490					0.07921964587308139
ILLMTVLGAS	10	Unmodified	_ILLMTVLGAS_					0	0	0			REV__ENST00000479543.1_3_11:35283254-35308332:-|nuORF	REV__ENST00000479543.1_3_11:35283254-35308332:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.3060302734375	2	509.304278	1016.594	0.22243	0.00011328	3.2465	0.0016535	3.469	0.0017668	509.3057747987958	92.885	1.4312	93.335	92.732	94.163	0.44988					93	33	4	0	0	0	0.74274	1	11100	11100		42.396	1.618	1	968200	+		17765	17814	11957	11966	20491	20491					0.08637028407838443
ILLNCKVA	8	Unmodified	_ILLNCKVA_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2657470703125	2	437.264956	872.515359	1.7902	0.0007828	0.24809	0.00010848	2.0383	0.00089128	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.86288	1	793	793		26.796	3.7536	1	738160			17766	5146	11958	11967	20492	20492					0.07400220893396181
ILLPEIVVLIK	11	Unmodified	_ILLPEIVVLIK_					0	0	0			REV__ENSG00000115524|ENST00000335508|SF3B1	REV__ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.4352416992188	2	625.428325	1248.8421	2.9227	0.0018279	2.5041	0.0015661	5.4268	0.0033941	625.429727159543	108.86	0.68909	108.83	108.52	109.21	-0.029381					65	29	3	0	0	0	0.85101	1	12058	12058		5.9211	2.5111	1	3045400	+		17767	18126	11959	11968	20493	20493					0.22762900267116493
ILLPEIVVLIK	11	Unmodified	_ILLPEIVVLIK_					0	0	0			REV__ENSG00000115524|ENST00000335508|SF3B1	REV__ENSG00000115524|ENST00000335508|SF3B1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.28936767578125	3	417.287975	1248.8421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.578	1	72.62	72.12	73.12	0.042114								0	0	0	0.56276	1	6987	6987		12.957	0	1		+		17768	18126	11959	11968	20494	20494					0.22762900267116493
ILLPEIVVLIK	11	Unmodified	_ILLPEIVVLIK_					0	0	0			REV__ENSG00000115524|ENST00000335508|SF3B1	REV__ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	625.429931640625	2	625.428325	1248.8421	0.92485	0.00057843	4.2025	0.0026284	5.1274	0.0032068	625.4306858418821	108.95	0.54751	109.03	108.69	109.24	0.078552					43	24	2	0	0	0	0.80516	1	11736	11736		10.265	5.3595	1	929680	+		17769	18126	11959	11968	20495	20495					0.22762900267116493
ILLPPLFM	8	Unmodified	_ILLPPLFM_					0	0	0			REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.287841796875	2	472.2879	942.561247	-1.7052	-0.00080534	1.6051	0.00075807	-0.10007	-4.7264E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.80127	1	12682	12682		16.705	0.23182	1	3080300	+		17770	17948	11960	11969	20496	20496					0.0876686607564352
ILLPPTGT	8	Unmodified	_ILLPPTGT_					0	0	0		ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2484130859375	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.884	1	9106	9106		33.516	5.2613	1	50007000			17771	918	11961	11970	20497	20497					0.07228185499855044
ILLPPTGT	8	Unmodified	_ILLPPTGT_					0	0	0		ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24798583984375	2	406.249829	810.485105	1.1516	0.00046786	-4.2235	-0.0017158	-3.0718	-0.0012479	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.80706	1	9421	9421		19.36	3.7238	1	58759000			17772	918	11961	11970	20498	20498					0.07228185499855044
ILLPPTGT	8	Unmodified	_ILLPPTGT_					0	0	0		ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.24853515625	2	406.249829	810.485105	-1.8141	-0.00073698	-1.2967	-0.0005268	-3.1108	-0.0012638	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.86791	1	8776	8776		28.254	1.4582	1	42617000			17773	918	11961	11970	20499	20499					0.07228185499855044
ILLPPVNLLDT	11	Unmodified	_ILLPPVNLLDT_					0	0	0			REV__nc|ENSG00000256771|O75346-2|ZNF253	REV__nc|ENSG00000256771|O75346-2|ZNF253	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3671875	2	604.368464	1206.72238	-1.2751	-0.00077064	-1.2835	-0.00077571	-2.5586	-0.0015464	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.77538	1	12099	12099		16.473	0.83134	1	3346600	+		17774	23911	11962	11971	20500	20500					0.12728286922560983
ILLPVTVSS	9	Unmodified	_ILLPVTVSS_					0	0	0			REV__ENSG00000255582|ENST00000542433|OR10G2	REV__ENSG00000255582|ENST00000542433|OR10G2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7881164550781	2	464.789318	927.564084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.404	1	36.344	35.844	36.844	-0.060333								0	0	0	0.31828	1	2001	2001		24.203	2.5004	1		+		17775	23900	11963	11972	20501	20501					0.0974041273415196
ILLQVTPLD	9	Unmodified	_ILLQVTPLD_					0	0	0			REV__ENST00000451029.5_1_7:89905415-89916830:+|nuORF	REV__ENST00000451029.5_1_7:89905415-89916830:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3085021972656	2	506.307875	1010.6012	0.40486	0.00020498	1.9335	0.00097895	2.3384	0.0011839	506.30888331142467	56.209	0.70053	56.309	55.673	56.373	0.099186					45	29	2	0	0	0	0.78124	1	4678	4678		30.318	0	1	200050	+		17776	17570	11964	11973	20502	20502					0.09632084279917308
ILLRAEHLP	9	Unmodified	_ILLRAEHLP_					0	0	0			REV__ENST00000433671.2_1_1:39325880-39379285:+|nuORF	REV__ENST00000433671.2_1_1:39325880-39379285:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3317260742188	2	531.326934	1060.63931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.09	1	106.28	105.78	106.78	0.18647								0	0	0	0.32159	1	12979	12979		23.042	0	1		+		17777	26655	11965	11974	20503	20503					0.1114201498521652
ILLRIVQMLEH	11	Unmodified	_ILLRIVQMLEH_					0	0	0		ENST00000482059.6_1_7:80267993-80269165:+|nuORF	ENST00000482059.6_1_7:80267993-80269165:+|nuORF	ENST00000482059.6_1_7:80267993-80269165:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6090393066406	3	455.607602	1363.80098	-1.2148	-0.00055347	2.9257	0.001333	1.7109	0.0007795	455.6088555000252	68.308	1.0125	68.443	67.92	68.932	0.13521					65	38	2	0	0	0	0.74771	1	6109	6109		22.562	1.5294	1	184950			17778	12478	11966	11975	20504	20504					0.13362815955997576
ILLRVFSKSR	10	Unmodified	_ILLRVFSKSR_					0	0	0		ENST00000463518.5_3_3:160939127-160939241:+|nuORF	ENST00000463518.5_3_3:160939127-160939241:+|nuORF	ENST00000463518.5_3_3:160939127-160939241:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2485656738281	3	406.927552	1217.76083	-1.8144	-0.00073832	-2.772	-0.001128	-4.5864	-0.0018663	407.2613136870756	88.152	0.15809	88.354	88.267	88.425	0.20115					5	3	2	0	0	0	0.37624	1	8740	8740		16.007	4.3708	1	40847			17779	12069	11967	11976	20505	20505					0.16065637347742268
ILLSGTVLP	9	Unmodified	_ILLSGTVLP_					0	0	0		nc|ENSG00000168961|O00182-3|LGALS9;nc|ENSG00000168961|O00182-2|LGALS9;nc|ENSG00000168961|O00182-6|LGALS9;ENSG00000168961|ENST00000395473|LGALS9;ENST00000486774.1_1_17:25972868-25974145:+|nuORF;ENST00000584386.5_1_17:25958291-25974145:+|nuORF;nc|ENSG00000168961|O00182-5|LGALS9;nc|ENSG00000168961|O00182-4|LGALS9	nc|ENSG00000168961|O00182-3|LGALS9	nc|ENSG00000168961|O00182-3|LGALS9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.790283203125	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.7932	1	3738	3738		24.203	0	1	652510			17780	6456	11968	11977	20506	20506					0.10984716596760791
ILLSLGSY	8	Unmodified	_ILLSLGSY_					0	0	0			REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	433.2555847167969	2	433.255111	864.49567	-0.96205	-0.00041681	0.18396	7.9702E-05	-0.77809	-0.00033711	433.2558834375808	107.3	0.97002	107.3	106.8	107.77	0					98	22	6	0	0	0	0.88915	1	11137	11137		35.201	4.6971	1	53955000	+		17781	22285	11969	11978	20507	20507					0.05800168154291896
ILLSLGSY	8	Unmodified	_ILLSLGSY_					0	0	0			REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.2557373046875	2	433.255111	864.49567	-0.16825	-7.2895E-05	-0.65993	-0.00028592	-0.82818	-0.00035881	433.25555494708175	107.35	1.0528	107.31	106.77	107.82	-0.034409					102	24	6	0	0	0	0.89457	1	11691	11691		37.028	7.1869	1	61129000	+		17782	22285	11969	11978	20508	20508					0.05800168154291896
ILLSLGSY	8	Unmodified	_ILLSLGSY_					0	0	0			REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.2557373046875	2	433.255111	864.49567	2.7182	0.0011777	-3.4266	-0.0014846	-0.70837	-0.00030691	433.2543702716111	107.32	1.0507	107.28	106.79	107.84	-0.034134					105	24	6	0	0	0	0.88915	1	11876	11876		35.201	6.9464	1	62658000	+		17783	22285	11969	11978	20509	20509					0.05800168154291896
ILLSLGSY	8	Unmodified	_ILLSLGSY_					0	0	0			REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.25579833984375	2	433.255111	864.49567	-1.5591	-0.00067547	0.36423	0.0001578	-1.1948	-0.00051767	433.25608106819277	107.03	1.2892	107.16	106.64	107.93	0.13866					139	31	6	0	0	0	0.89457	2	11478	11466;11478		44.531	12.576	1	127480000	+		17784	22285	11969	11978	20510;20511	20511					0.05800168154291896
ILLSLGSY	8	Unmodified	_ILLSLGSY_					0	0	0			REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.2558898925781	2	433.255111	864.49567	0.73522	0.00031854	-1.8791	-0.00081413	-1.1439	-0.00049559	433.2550173267258	107.12	1.2179	107.21	106.73	107.95	0.091255					137	29	6	0	0	0	0.9159	3	11476	11476;11488;11500		44.531	14.69	1	118330000	+		17785	22285	11969	11978	20512;20513;20514	20512					0.05800168154291896
ILLSLGSY	8	Unmodified	_ILLSLGSY_					0	0	0			REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.2557678222656	2	433.255111	864.49567	-1.8302	-0.00079294	0.64395	0.000279	-1.1862	-0.00051394	433.25608407355435	107.16	1.1935	107.2	106.67	107.87	0.036118					137	28	6	0	0	0	0.88915	2	11438	11414;11438		37.028	0	1	100650000	+		17786	22285	11969	11978	20515;20516	20516					0.05800168154291896
ILLSLGSY	8	Unmodified	_ILLSLGSY_					0	0	0			REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.2547302246094	2	433.255111	864.49567	-1.8301	-0.00079292	0.37153	0.00016097	-1.4586	-0.00063195	433.2555828109104	113.15	0.20975	113.12	113.01	113.22	-0.032326					14	5	3	0	0	0	0.92176	1	12064	12064		46.766	0	1	2295000	+		17787	22285	11969	11978	20517	20517					0.05800168154291896
ILLSLGSY	8	Unmodified	_ILLSLGSY_					0	0	0			REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	433.255111	864.49567	2.7176	0.0011774	-3.3954	-0.0014711	-0.6778	-0.00029366	433.25338028437926	112.87	0.65103	112.84	112.7	113.35	-0.024811	-0.14639	-0.00083781	NaN	46.766	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	542430	+		17788	22285	11969	11978							0.05800168154291896
ILLSLGSY	8	Unmodified	_ILLSLGSY_					0	0	0			REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	433.255111	864.49567	1.9998	0.00086641	-2.5187	-0.0010913	-0.51897	-0.00022485	433.25388281129375	112.97	0.32044	113	112.83	113.15	0.030602	0.014729	-7.8149E-05	NaN	46.766	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156580	+		17789	22285	11969	11978							0.05800168154291896
ILLTEALTT	9	Unmodified	_ILLTEALTT_					0	0	0			REV__ENST00000590891.1_1_16:4659124-4659325:-|nuORF	REV__ENST00000590891.1_1_16:4659124-4659325:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7910461425781	2	487.792058	973.569563	-0.98777	-0.00048183	-1.4449	-0.00070479	-2.4326	-0.0011866	487.7914154704245	97.284	1.3171	97.332	96.827	98.144	0.048157					64	30	3	0	0	0	0.72402	1	10369	10369		38.806	0	1	415160	+		17790	29191	11970	11979	20518	20518					0.08172091525932501
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.31396484375	2	516.312103	1030.60965	-0.68072	-0.00035146	4.0405	0.0020861	3.3597	0.0017347	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.6398	13	10264	10013;10090;10102;10145;10168;10192;10205;10228;10264;10313;10325;10372;10383		47.916	10.363	1	39641000	+		17791	22881	11971	11980	20519;20520;20521;20522;20523;20524;20525;20526;20527;20528;20529;20530;20531	20527					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3140869140625	2	516.312103	1030.60965	-0.047196	-2.4368E-05	3.3567	0.0017331	3.3095	0.0017087	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.84112	5	10521	10521;10617;10700;10736;10881		37.159	5.2042	1	63062000	+		17792	22881	11971	11980	20532;20533;20534;20535;20536	20532					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3133544921875	2	516.312103	1030.60965	-0.046988	-2.426E-05	4.3892	0.0022662	4.3422	0.0022419	516.3143957799225	103.64	1.2184	103.63	103.07	104.29	-0.0035706					70	29	3	0	0	0	0.86201	1	11119	11119		24.203	1.1603	1	638740	+		17793	22881	11971	11980	20537	20537					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3138427734375	2	516.312103	1030.60965	2.7794	0.001435	0.50073	0.00025853	3.2801	0.0016935	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.71042	5	10827	10719;10791;10827;10900;10947		44.117	6.9577	1	67991000	+		17794	22881	11971	11980	20538;20539;20540;20541;20542	20540					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3136596679688	2	516.312103	1030.60965	3.0983	0.0015997	0.82008	0.00042342	3.9184	0.0020231	516.3124899317548	102.33	1.1091	102.29	101.92	103.03	-0.047005					68	26	3	0	0	0	0.86589	1	11166	11166		29.15	4.9468	1	756390	+		17795	22881	11971	11980	20543	20543					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3134155273438	2	516.312103	1030.60965	3.1032	0.0016022	1.1619	0.00059988	4.2651	0.0022021	516.312736387189	103.55	1.1906	103.5	102.99	104.18	-0.043755					71	28	3	0	0	0	0.85934	1	11340	11340		35.618	3.6634	1	574770	+		17796	22881	11971	11980	20544	20544					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.315185546875	2	516.312103	1030.60965	3.1012	0.0016012	0.56309	0.00029073	3.6643	0.0018919	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.85934	1	13130	13130		35.618	0	1	1162600	+		17797	22881	11971	11980	20545	20545					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.31396484375	2	516.312103	1030.60965	0.87601	0.00045229	2.4044	0.0012414	3.2804	0.0016937	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.84112	12	10576	10544;10576;10588;10660;10672;10732;10769;10817;10841;10889;10913;10926		37.159	6.6555	1	67025000	+		17798	22881	11971	11980	20546;20547;20548;20549;20550;20551;20552;20553;20554;20555;20556;20557	20547					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3126220703125	2	516.312103	1030.60965	0.87326	0.00045088	3.4783	0.0017959	4.3516	0.0022468	516.3139378124242	103.43	1.1844	103.48	102.98	104.17	0.041481					70	28	3	0	0	0	0.81018	1	11236	11236		38.806	9.6566	1	679730	+		17799	22881	11971	11980	20558	20558					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3140258789062	2	516.312103	1030.60965	-0.25799	-0.00013321	3.436	0.001774	3.178	0.0016408	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.81018	10	10574	10264;10336;10372;10394;10418;10430;10502;10514;10574;10598		38.806	8.3025	1	82226000	+		17800	22881	11971	11980	20559;20560;20561;20562;20563;20564;20565;20566;20567;20568	20567					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3143920898438	2	516.312103	1030.60965	-0.25527	-0.0001318	4.18	0.0021582	3.9248	0.0020264	516.3141964907301	102.01	1.1313	102.2	101.89	103.02	0.19484					90	27	4	0	0	0	0.86452	2	10695	10695;10779		30.504	5.0535	1	1199700	+		17801	22881	11971	11980	20569;20570	20569					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.313720703125	2	516.312103	1030.60965	0.80556	0.00041592	2.4849	0.001283	3.2904	0.0016989	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.81018	9	10579	10244;10303;10327;10351;10363;10387;10543;10579;10591		38.806	8.3025	1	72906000	+		17802	22881	11971	11980	20571;20572;20573;20574;20575;20576;20577;20578;20579	20578					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3134765625	2	516.312103	1030.60965	0.81867	0.00042269	3.4136	0.0017625	4.2323	0.0021852	516.3139586362336	103.31	1.1027	103.44	102.97	104.08	0.12621					71	27	3	0	0	0	0.71042	1	10927	10927		44.117	16.235	1	1034200	+		17803	22881	11971	11980	20580	20580					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3145141601562	2	516.312103	1030.60965	1.9037	0.0009829	1.7854	0.00092181	3.6891	0.0019047	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.85934	1	11993	11993		35.618	5.1146	1	22616000	+		17804	22881	11971	11980	20581	20581					0.09557314924882121
ILLTLGLSAM	10	Unmodified	_ILLTLGLSAM_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.81787109375	2	516.312103	1030.60965	2.4464	0.0012631	1.5493	0.0007999	3.9956	0.002063	516.3127117478653	113.99	1.2381	114.01	113.16	114.4	0.020027					83	56	2	0	0	0	0.86452	1	13757	13757		30.504	1.3336	1	57415	+		17805	22881	11971	11980	20582	20582					0.09557314924882121
ILLTNTKVPRN	11	Unmodified	_ILLTNTKVPRN_					0	0	0		ENSG00000110921|ENST00000228510|MVK	ENSG00000110921|ENST00000228510|MVK	ENSG00000110921|ENST00000228510|MVK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.8930053710938	2	634.887887	1267.76122	2.7957	0.0017749	4.3447	0.0027584	7.1403	0.0045333	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.48529	8	11625	11625;11637;11649;11673;11697;11721;11745;11771		52.937	12.159	1	42597000			17806	2552	11972	11981	20583;20584;20585;20586;20587;20588;20589;20590	20583					0.13805012276952766
ILLTNTKVPRN	11	Unmodified	_ILLTNTKVPRN_					0	0	0		ENSG00000110921|ENST00000228510|MVK	ENSG00000110921|ENST00000228510|MVK	ENSG00000110921|ENST00000228510|MVK	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8929443359375	2	634.887887	1267.76122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.09	1	105.31	104.81	105.81	0.2268								0	0	0	0.56276	1	12845	12845		24.519	0.99649	1				17807	2552	11972	11981	20591	20591					0.13805012276952766
ILLVLLIVK	9	Unmodified	_ILLVLLIVK_					0	0	0		ENSG00000135211|ENST00000257663|TMEM60	ENSG00000135211|ENST00000257663|TMEM60	ENSG00000135211|ENST00000257663|TMEM60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.3788452148438	2	512.380646	1022.74674	-0.0015611	-7.999E-07	-2.8838	-0.0014776	-2.8854	-0.0014784	512.3789962799415	85.533	0.82014	85.981	85.624	86.445	0.44736					45	19	3	0	0	0	0.7932	1	10027	10027		12.959	4.7279	1	481470			17808	3991	11973	11982	20592	20592					0.23627591866761577
ILLVLLMLQSD	11	Unmodified	_ILLVLLMLQSD_					0	0	0		ENST00000370500.9_1_1:89318972-89319026:-|nuORF	ENST00000370500.9_1_1:89318972-89319026:-|nuORF	ENST00000370500.9_1_1:89318972-89319026:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	629.3849487304688	2	629.377974	1256.7414	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.05	1	117.95	117.45	118.45	-0.10152								0	0	0	0.56276	1	14076	14076		18.262	4.808	1				17809	10638	11974	11983	20593	20593					0.12329500221972012
ILLVLPLLN	9	Unmodified	_ILLVLPLLN_					0	0	0			REV__ENST00000425583.6_1_4:48853950-48862750:+|nuORF	REV__ENST00000425583.6_1_4:48853950-48862750:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3466796875	2	504.346803	1006.67905	-0.55637	-0.0002806	-2.161	-0.0010899	-2.7173	-0.0013705	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.7932	1	5764	5764		20.482	1.1219	1	1905800	+		17810	26535	11975	11984	20594	20594					0.17598141935945932
ILLVVVLTN	9	Unmodified	_ILLVVVLTN_					0	0	0		ENSG00000180934|ENST00000641900|OR56A1;nc|ENSG00000180934|Q8NGH5|OR56A1	ENSG00000180934|ENST00000641900|OR56A1	ENSG00000180934|ENST00000641900|OR56A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.3287353515625	2	492.328611	982.642668	-0.29778	-0.00014661	0.50865	0.00025042	0.21088	0.00010382	492.32871788740124	77.995	0.65375	78.401	78.101	78.754	0.40531					36	15	3	0	0	0	0.17307	1	8885	8885		79.451	8.1553	1	724880			17811	7362	11976	11985	20595	20595					0.1506526503922032
ILMEVKVSL	9	Unmodified	_ILMEVKVSL_					0	0	0			REV__ENST00000578201.5_2_17:73662805-73662895:-|nuORF	REV__ENST00000578201.5_2_17:73662805-73662895:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.817626953125	2	516.312103	1030.60965	3.1012	0.0016012	0.56309	0.00029073	3.6643	0.0018919	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.7932	1	13089	13089		23.042	1.0826	1	1162600	+		17812	29021	11977	11986	20596	20596					0.09557314924882121
ILMKLMARTT	10	Unmodified	_ILMKLMARTT_					0	0	0		ENST00000492989.1_1_1:32505129-32508163:+|nuORF	ENST00000492989.1_1_1:32505129-32508163:+|nuORF	ENST00000492989.1_1_1:32505129-32508163:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3429565429688	2	589.343412	1176.67227	-0.65315	-0.00038493	-0.48572	-0.00028626	-1.1389	-0.00067119	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.8651	1	9530	9530		25.574	0.12388	1	5584100			17813	12714	11978	11987	20597	20597					0.09100137721407009
ILMKSGIIMFI	11	Unmodified	_ILMKSGIIMFI_					0	0	0			REV__ENST00000508821.5_1_5:60067860-60083214:-|nuORF	REV__ENST00000508821.5_1_5:60067860-60083214:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.58184814453125	3	422.583517	1264.72872	0.70592	0.00029831	-4.3039	-0.0018188	-3.598	-0.0015205	422.58159999345827	97.435	2.4101	97.596	96.789	99.199	0.16074					159	55	4	0	0	0	0.75544	1	10121	10121		20.837	3.004	1	461560	+		17814	27934	11979	11988	20598	20598					0.10694765558105246
ILMWKKWR	8	Unmodified	_ILMWKKWR_					0	0	0		ENST00000510338.5_3_3:141121195-141122849:+|nuORF	ENST00000510338.5_3_3:141121195-141122849:+|nuORF	ENST00000510338.5_3_3:141121195-141122849:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	580.8396606445312	2	580.841697	1159.66884	-0.77464	-0.00044995	-1.0492	-0.00060945	-1.8239	-0.0010594	580.8409079649531	69.999	0.8299	69.999	69.758	70.588	0					106	43	3	0	0	0	0.86288	1	6233	6233		26.796	3.2734	1	7674300			17815	13006	11980	11989	20599	20599					0.09539255729714569
ILNAIIFGRLE	11	Unmodified	_ILNAIIFGRLE_					0	0	0		nc|ENSG00000293555|Q8N8A8|FAM169BP	nc|ENSG00000293555|Q8N8A8|FAM169BP	nc|ENSG00000293555|Q8N8A8|FAM169BP	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.25445556640625	3	420.255446	1257.74451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.2	1	112.18	111.68	112.68	-0.019882								0	0	0	0.56276	1	11956	11956		21.032	3.1991	1				17816	15358	11981	11990	20600	20600					0.1259451139101202
ILNAPRVF	8	Unmodified	_ILNAPRVF_					0	0	0			REV__chr1:7940078-7940784|46|23.74|0.9|4.72|-|1|TNFRSF9,TNFRSF9|1	REV__chr1:7940078-7940784|46|23.74|0.9|4.72|-|1|TNFRSF9,TNFRSF9|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.28033447265625	2	465.281995	928.549437	-1.1036	-0.00051349	-3.1369	-0.0014595	-4.2405	-0.001973	465.28037254514356	89.207	2.109	89.207	88.71	90.819	0					110	48	4	0	0	0	0.88915	1	8674	8674		35.201	6.0512	1	1091500	+		17817	15455	11982	11991	20601	20601					0.08230385376668892
ILNGRVRNAN	10	Unmodified	_ILNGRVRNAN_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	563.8216552734375	2	563.825621	1125.63669	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.551	1	31.609	31.109	32.109	0.058315								0	0	0	0.45132	1	1441	1441		21.96	1.9631	1		+		17818	23536	11983	11992	20602	20602					0.07889559580280547
ILNKLTPQM	9	Oxidation (M)	_ILNKLTPQM(Oxidation (M))_		ILNKLTPQM(1)		ILNKLTPQM(82)	0	0	1		nc|ENSG00000075151|O43432|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1	nc|ENSG00000075151|O43432|EIF4G3;ENST00000442406.5_1_3:184038690-184052693:+|nuORF	ENST00000442406.5_1_3:184038690-184052693:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.3038940429688	2	537.30481	1072.59507	-0.87394	-0.00046957	-1.584	-0.00085108	-2.4579	-0.0013207	537.3038212972114	56.971	0.58598	57.368	57.072	57.658	0.39672					29	13	3	0	0	0	0.15959	1	5894	5894		82.241	21.269	1	488540			17819	2796;1320	11984	11993	20603	20603		21			0.06167242776700732
ILNKNRLL	8	Unmodified	_ILNKNRLL_					0	0	0			REV__ENSG00000198301|ENST00000356260|SDAD1	REV__ENSG00000198301|ENST00000356260|SDAD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.31951904296875	2	492.321651	982.62875	-0.75989	-0.00037411	-2.06	-0.0010142	-2.8198	-0.0013883	492.32056657313603	15.899	0.37498	15.947	15.788	16.163	0.047803					26	15	2	0	0	0	0.81548	1	99	99		20.482	3.1169	1	78070	+		17820	23315	11985	11994	20604	20604					0.136740323308004
ILNLANKFFK	10	Unmodified	_ILNLANKFFK_					0	0	0			REV__ENSG00000156486|ENST00000287042|KCNS2	REV__ENSG00000156486|ENST00000287042|KCNS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.24676513671875	3	403.24477	1206.71248	3.1806	0.0012826	2.1516	0.00086761	5.3322	0.0021502	403.2455898338112	104.57	4.2773	104.61	103.55	107.83	0.039864					310	101	5	0	0	0	0.85259	1	11479	11479		20.03	0.7678	1	15278000	+		17821	20491	11986	11995	20605	20605					0.11739143707836774
ILNNKLISK	9	Unmodified	_ILNNKLISK_					0	0	0		nc|ENSG00000011243|Q9ULX6-2|AKAP8L;ENSG00000011243|ENST00000397410|AKAP8L	nc|ENSG00000011243|Q9ULX6-2|AKAP8L	nc|ENSG00000011243|Q9ULX6-2|AKAP8L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.8342895507812	2	521.834591	1041.65463	1.2184	0.0006358	-1.3019	-0.00067935	-0.083457	-4.3551E-05	521.8337852007577	34.121	0.61716	34.426	34.159	34.776	0.30494					33	14	3	0	0	0	0.066118	1	2530	2530		101.25	27.278	1	549180			17822	784	11987	11996	20606	20606					0.13546881782394848
ILNNKLISK	9	Unmodified	_ILNNKLISK_					0	0	0		nc|ENSG00000011243|Q9ULX6-2|AKAP8L;ENSG00000011243|ENST00000397410|AKAP8L	nc|ENSG00000011243|Q9ULX6-2|AKAP8L	nc|ENSG00000011243|Q9ULX6-2|AKAP8L	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	521.834591	1041.65463	1.116	0.00058238	-1.0583	-0.00055228	0.057696	3.0108E-05	521.8338635225716	34.105	0.58044	34.315	34.065	34.646	0.21002	-0.055323	0.00013522	NaN	101.25	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	422510			17823	784	11987	11996							0.13546881782394848
ILNPMNHQN	9	Unmodified	_ILNPMNHQN_					0	0	0			REV__ENSG00000124177|ENST00000373233|CHD6	REV__ENSG00000124177|ENST00000373233|CHD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.7637329101562	2	540.766383	1079.51821	-0.12067	-6.5252E-05	-3.546	-0.0019176	-3.6667	-0.0019828	540.7642644040111	49.748	0.91899	49.655	49.23	50.149	-0.093178					33	21	2	0	0	0	0.78058	1	3871	3871		30.504	1.3336	1	162750	+		17824	18564	11988	11997	20607	20607					-0.018365557197512317
ILNQLTTIH	9	Unmodified	_ILNQLTTIH_					0	0	0		ENSG00000172468|ENST00000307393|HSFY1;ENSG00000169953|ENST00000304790|HSFY2	ENSG00000172468|ENST00000307393|HSFY1	ENSG00000172468|ENST00000307393|HSFY1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.8081665039062	2	526.808574	1051.60259	1.2418	0.00065418	-2.4353	-0.0012829	-1.1935	-0.00062874	526.8072201508533	100.99	2.1143	101.03	100.03	102.14	0.046349					121	49	4	0	0	0	0.14115	1	10884	10884		85.359	3.0545	1	2474600			17825	6545	11989	11998	20608	20608					0.07885718368652306
ILNRLQDMIQ	10	Unmodified	_ILNRLQDMIQ_					0	0	0			REV__ENST00000519391.1_1_8:118542904-118552214:+|nuORF	REV__ENST00000519391.1_1_8:118542904-118552214:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	622.2277221679688	2	622.344997	1242.67544	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.968	1	22.049	21.549	22.549	0.081615								0	0	0	0.45132	1	640	640		24.519	2.5593	1		+		17826	21112	11990	11999	20609	20609					0.06381104099773438
ILNRMAPVL	9	Unmodified	_ILNRMAPVL_					0	0	0		nc|ENSG00000132313|Q9NZE8-2|MRPL35;ENSG00000132313|ENST00000337109|MRPL35	nc|ENSG00000132313|Q9NZE8-2|MRPL35	nc|ENSG00000132313|Q9NZE8-2|MRPL35	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8086547851562	2	513.810062	1025.60557	-1.4174	-0.00072826	-0.72923	-0.00037469	-2.1466	-0.0011029	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.72402	1	3885	3885		38.806	0	1	1977600			17827	3779	11991	12000	20610	20610					0.09379270221802471
ILNRMAPVL	9	Unmodified	_ILNRMAPVL_					0	0	0		nc|ENSG00000132313|Q9NZE8-2|MRPL35;ENSG00000132313|ENST00000337109|MRPL35	nc|ENSG00000132313|Q9NZE8-2|MRPL35	nc|ENSG00000132313|Q9NZE8-2|MRPL35	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.80908203125	2	513.810062	1025.60557	-0.12671	-6.5103E-05	-1.9623	-0.0010083	-2.089	-0.0010734	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.77546	1	3988	3988		31.955	2.8053	1	1731500			17828	3779	11991	12000	20611	20611					0.09379270221802471
ILNSNLIAL	9	Unmodified	_ILNSNLIAL_					0	0	0		chr14:54406469-54408745|13|34.92|0.02|10.72|+|1|TE_info:L1P2,L1P2_dup1366,L1,LINE,donor,-,54404879,54406469|None,CDKN3|7	chr14:54406469-54408745|13|34.92|0.02|10.72|+|1|TE_info:L1P2,L1P2_dup1366,L1,LINE,donor,-,54404879,54406469|None,CDKN3|7	chr14:54406469-54408745|13|34.92|0.02|10.72|+|1|TE_info:L1P2,L1P2_dup1366,L1,LINE,donor,-,54404879,54406469|None,CDKN3|7	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.87158203125	2	485.800217	969.585882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.695	1	15.615	15.115	16.115	-0.080017								0	0	0	0.32758	1	44	44		20.947	0.4651	1				17829	170	11992	12001	20612	20612					0.09987217482705546
ILNTTIIKEN	10	Unmodified	_ILNTTIIKEN_					0	0	0			REV__nc|ENSG00000133863|Q9BXT5|TEX15	REV__nc|ENSG00000133863|Q9BXT5|TEX15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.8438110351562	2	579.840071	1157.66559	3.115	0.0018062	3.3738	0.0019563	6.4888	0.0037625	579.8421153406522	102.31	1.4996	102.26	101.49	102.99	-0.047005					86	35	4	0	0	0	0.86348	1	11171	11171		31.53	1.2121	1	1243200	+		17830	19100	11993	12002	20613	20613					0.09306239366060254
ILNVSAVDK	9	Unmodified	_ILNVSAVDK_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000532091.1_1_11:122929265-122929517:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.7814636230469	2	479.782025	957.549496	-0.74687	-0.00035834	-0.27906	-0.00013389	-1.0259	-0.00049222	479.7817119155876	42.804	0.53654	43.237	42.924	43.46	0.4334					34	12	4	0	0	0	0.18893	1	3830	3830		76.17	7.3829	1	2374200			17831	2497	11994	12003	20614	20614					0.0690234058599799
ILNVSAVDK	9	Unmodified	_ILNVSAVDK_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000532091.1_1_11:122929265-122929517:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.78216552734375	2	479.782025	957.549496	-2.5523	-0.0012245	1.3255	0.00063594	-1.2268	-0.00058859	479.78253003108716	42.661	0.62015	43.359	43.052	43.672	0.69754					36	14	4	0	0	0	0.31797	1	3829	3829		63.426	3.4957	1	2675400			17832	2497	11994	12003	20615	20615					0.0690234058599799
ILPAAARQQRK	11	Unmodified	_ILPAAARQQRK_					0	0	0		ENST00000367434.4_1_1:193155339-193155666:-|nuORF	ENST00000367434.4_1_1:193155339-193155666:-|nuORF	ENST00000367434.4_1_1:193155339-193155666:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3892211914062	2	626.385845	1250.75714	2.3128	0.0014487	-2.3561	-0.0014758	-0.043276	-2.7107E-05	626.8860681580434	110.01	1.5052	110.06	109.66	111.17	0.054062					106	56	2	0	0	0	0.71452	1	13274	13274		29.15	0	1	1083000			17833	10544	11995	12004	20616	20616					0.1417896757386643
ILPAVPVLVK	10	Unmodified	_ILPAVPVLVK_					0	0	0		ENST00000251166.8_1_16:4404662-4404824:-|nuORF	ENST00000251166.8_1_16:4404662-4404824:-|nuORF	ENST00000251166.8_1_16:4404662-4404824:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.82666015625	2	524.860078	1047.7056	-0.039174	-2.0561E-05	-0.05008	-2.6285E-05	-0.089254	-4.6846E-05	524.8601093417468	99.526	0.5713	99.567	99.14	99.711	0.041107					20	13	2	0	0	0	0.37624	1	10570	10570		25.45	8.0852	1	91057			17834	9298	11996	12005	20617	20617					0.18365830827269747
ILPELRYAV	9	Unmodified	_ILPELRYAV_					0	0	0			REV__ENST00000555400.1_1_14:53521153-53527951:-|nuORF;REV__nc|ENSG00000100523|Q8NEL9-3|DDHD1	REV__nc|ENSG00000100523|Q8NEL9-3|DDHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.8013305664062	2	537.321317	1072.62808	-0.3	-0.00016119	-3.6419	-0.0019569	-3.9419	-0.002118	537.3192632885034	19.273	0.35723	18.643	18.444	18.801	-0.6296					12	7	2	0	0	0	0.20789	1	481	481		16.473	10.552	1	62222	+		17835	28682;17200	11997	12006	20618	20618					0.09467192891065679
ILPGLVNR	8	Unmodified	_ILPGLVNR_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.2862243652344	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.503	1	40.584	40.084	41.084	0.081345								0	0	0	0.29871	1	2577	2577		23.037	1.3344	1				17836	961	11998	12007	20619	20619					0.10438385376653514
ILPITVTMN	9	Unmodified	_ILPITVTMN_					0	0	0		ENST00000540872.5_1_10:46242054-46245556:+|nuORF	ENST00000540872.5_1_10:46242054-46245556:+|nuORF	ENST00000540872.5_1_10:46242054-46245556:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2903137207031	2	501.288628	1000.5627	0.83893	0.00042055	2.6202	0.0013135	3.4591	0.001734	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.77546	1	8692	8692		31.955	1.4512	1	2850500			17837	13510	11999	12008	20620	20620					0.06244455373735036
ILPKIGGN	8	Unmodified	_ILPKIGGN_					0	0	0		nc|ENSG00000116774|Q9NRN5-3|OLFML3	nc|ENSG00000116774|Q9NRN5-3|OLFML3	nc|ENSG00000116774|Q9NRN5-3|OLFML3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.564697265625	2	406.255446	810.496338	-0.0037396	-1.5192E-06	4.3265	0.0017577	4.3228	0.0017562	406.25713559479755	58.87	2.0028	58.839	58.209	60.212	-0.030888					78	56	2	0	0	0	0.4196	1	5604	5604		18.324	0	1	96008			17838	14861	12000	12009	20621	20621					0.08351007593989834
ILPKIGGN	8	Unmodified	_ILPKIGGN_					0	0	0		nc|ENSG00000116774|Q9NRN5-3|OLFML3	nc|ENSG00000116774|Q9NRN5-3|OLFML3	nc|ENSG00000116774|Q9NRN5-3|OLFML3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.564697265625	2	406.255446	810.496338	1.5318	0.0006223	2.0233	0.00082196	3.5551	0.0014443	406.25606824962415	63.305	1.1649	63.333	62.634	63.799	0.027653					73	51	2	0	0	0	0.4196	1	5954	5954		18.324	0	1	79310			17839	14861	12000	12009	20622	20622					0.08351007593989834
ILPKIGGN	8	Unmodified	_ILPKIGGN_					0	0	0		nc|ENSG00000116774|Q9NRN5-3|OLFML3	nc|ENSG00000116774|Q9NRN5-3|OLFML3	nc|ENSG00000116774|Q9NRN5-3|OLFML3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.8673	-0.00075862	5.9235	0.0024065	4.0562	0.0016478	406.2577550637646	59	1.8212	59.087	58.611	60.432	0.087002	0.18668	0.0017289	NaN	12.207	88	67	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150050			17840	14861	12000	12009							0.08351007593989834
ILPKNPKLVPK	11	Unmodified	_ILPKNPKLVPK_					0	0	0			REV__ENSG00000172586|ENST00000372833|CHCHD1	REV__ENSG00000172586|ENST00000372833|CHCHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.9159545898438	2	623.915916	1245.81728	2.3391	0.0014594	-1.197	-0.0007468	1.1422	0.00071262	623.9150348689084	109.89	1.4015	109.95	109.45	110.85	0.067932					103	58	2	0	0	0	0.77937	1	13323	13323		15.642	4.1308	1	709500	+		17841	21844	12001	12010	20623	20623					0.20420265184384334
ILPLGLGARA	10	Unmodified	_ILPLGLGARA_					0	0	0			REV__ENSG00000162300|ENST00000294258|ZFPL1	REV__ENSG00000162300|ENST00000294258|ZFPL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.18511962890625	2	490.816202	979.617851	0.554	0.00027191	-2.2418	-0.0011003	-1.6878	-0.00082842	490.8150629990905	74.188	0.55149	74.319	74.118	74.669	0.13126					27	20	2	0	0	0	0.37624	1	6866	6866		30.504	22.699	1	75882	+		17842	20802	12002	12011	20624	20624					0.127226299565109
ILPLLLTSLL	10	Unmodified	_ILPLLLTSLL_					0	0	0		nc|ENSG00000100150|O75140-5|DEPDC5	nc|ENSG00000100150|O75140-5|DEPDC5	nc|ENSG00000100150|O75140-5|DEPDC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3742065429688	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.8488	1	2418	2418		17.365	3.5896	1	314410			17843	14808	12003	12012	20625	20625					0.18790680278880245
ILPLMTIGM	9	Unmodified	_ILPLMTIGM_					0	0	0		ENSG00000165392|ENST00000298139|WRN	ENSG00000165392|ENST00000298139|WRN	ENSG00000165392|ENST00000298139|WRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.78021240234375	2	494.782124	987.549696	-0.85772	-0.00042438	-2.6539	-0.0013131	-3.5116	-0.0017375	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.7932	1	8743	8743		25.45	4.5032	1	737700			17844	6079	12004	12013	20626	20626					0.0554230098998687
ILPLNEEY	8	Unmodified	_ILPLNEEY_					0	0	0			REV__chr3:62327746-62331325|50|25.22|0.95|4.74|+|0|TE_info:L1MC5,L1MC5_dup2613,L1,LINE,donor,-,62327545,62327746|None,C3orf14|4	REV__chr3:62327746-62331325|50|25.22|0.95|4.74|+|0|TE_info:L1MC5,L1MC5_dup2613,L1,LINE,donor,-,62327545,62327746|None,C3orf14|4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.26165771484375	2	495.760758	989.506963	-1.9425	-0.00096301	0.087961	4.3608E-05	-1.8545	-0.0009194	495.7602537576442	19.302	1.1114	19.302	18.834	19.945	0					76	43	2	0	0	0	0.87479	1	381	381		30.504	0	1	56551	+		17845	15812	12005	12014	20627	20627					0.011789454577638026
ILPNRSQIKLN	11	Unmodified	_ILPNRSQIKLN_					0	0	0		ENST00000537952.1_1_12:118628187-118628226:-|nuORF	ENST00000537952.1_1_12:118628187-118628226:-|nuORF	ENST00000537952.1_1_12:118628187-118628226:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3923950195312	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.7434	1	12619	12619		23.523	1.8369	1	2297700			17846	13456	12006	12015	20628	20628					0.13652414651232903
ILPPEVAS	8	Unmodified	_ILPPEVAS_					0	0	0		ENST00000428221.5_1_2:11586145-11586385:-|nuORF	ENST00000428221.5_1_2:11586145-11586385:-|nuORF	ENST00000428221.5_1_2:11586145-11586385:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2375183105469	2	413.239461	824.46437	-0.12335	-5.0972E-05	-2.6877	-0.0011107	-2.811	-0.0011616	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.86288	1	7426	7426		26.796	0	1	1978800			17847	11592	12007	12016	20629	20629					0.045115951201864846
ILPPPFVF	8	Unmodified	_ILPPPFVF_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.2801513671875	2	465.278389	928.542226	0.66247	0.00030823	2.7775	0.0012923	3.44	0.0016005	465.27955521005777	88.84	2.0285	88.99	88.523	90.552	0.15055					102	47	4	0	0	0	0.88393	1	8830	8830		33.493	8.989	1	1291300	+		17848	23227	12008	12017	20630	20630					0.07509652776229814
ILPPVETG	8	Unmodified	_ILPPVETG_					0	0	0			REV__ENSG00000101825|ENST00000217939|MXRA5	REV__ENSG00000101825|ENST00000217939|MXRA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2376403808594	2	413.239461	824.46437	-1.33	-0.0005496	-1.1028	-0.00045573	-2.4328	-0.0010053	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.87276	1	7116	7116		29.842	3.0454	1	895630	+		17849	17304	12009	12018	20631	20631					0.045115951201864846
ILPPVETGKPL	11	Unmodified	_ILPPVETGKPL_					0	0	0			REV__ENSG00000101825|ENST00000217939|MXRA5	REV__ENSG00000101825|ENST00000217939|MXRA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3545532226562	2	582.355357	1162.69616	0.16989	9.8934E-05	-3.1776	-0.0018505	-3.0077	-0.0017515	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.75495	1	12493	12493		20.947	0.95016	1	635410	+		17850	17304	12010	12019	20632	20632					0.12132017751082458
ILPQAVSRPAR	11	Unmodified	_ILPQAVSRPAR_					0	0	0		ENST00000418833.2_1_1:1335453-1336111:+|nuORF	ENST00000418833.2_1_1:1335453-1336111:+|nuORF	ENST00000418833.2_1_1:1335453-1336111:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3673706054688	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.76322	1	12134	12134		19.104	2.6304	1	3346600			17851	11430	12011	12020	20633	20633					0.12459876308253115
ILPRVVKMH	9	Unmodified	_ILPRVVKMH_					0	0	0		ENST00000587482.1_1_19:3649915-3700388:-|nuORF;nc|ENSG00000186111|O60331-4|PIP5K1C;ENSG00000186111|ENST00000335312|PIP5K1C;nc|ENSG00000186111|O60331-2|PIP5K1C;nc|ENSG00000186111|O60331-3|PIP5K1C	ENST00000587482.1_1_19:3649915-3700388:-|nuORF	ENST00000587482.1_1_19:3649915-3700388:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.8424072265625	2	546.839154	1091.66375	2.1573	0.0011797	-0.46549	-0.00025455	1.6919	0.00092517	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.7932	1	12428	12428		23.042	2.0956	1	10074000			17852	7774	12012	12021	20634	20634					0.12158951867127143
ILPSGPLKSP	10	Unmodified	_ILPSGPLKSP_					0	0	0			REV__nc|ENSG00000114982|Q9P2N6-8|KANSL3	REV__nc|ENSG00000114982|Q9P2N6-8|KANSL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.23846435546875	2	504.808042	1007.60153	-0.072924	-3.6813E-05	-1.2956	-0.00065405	-1.3686	-0.00069086	504.80755669561813	47.764	0.7056	48.687	48.238	48.944	0.92315					26	17	2	0	0	0	0.37624	1	4569	4569		26.693	10.22	1	126450	+		17853	18077	12013	12022	20635	20635					0.09803503999751229
ILPSGPLKSP	10	Unmodified	_ILPSGPLKSP_					0	0	0			REV__nc|ENSG00000114982|Q9P2N6-8|KANSL3	REV__nc|ENSG00000114982|Q9P2N6-8|KANSL3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	504.808042	1007.60153	-1.2066	-0.00060909	0.681	0.00034378	-0.52558	-0.00026532	504.8082253816812	47.885	0.74087	48.354	48.007	48.748	0.46941	-0.16628	0.00064722	NaN	34.173	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110290	+		17854	18077	12013	12022							0.09803503999751229
ILPSPQAAM	9	Unmodified	_ILPSPQAAM_					0	0	0		ENST00000578025.5_1_17:56414635-56414889:+|nuORF	ENST00000578025.5_1_17:56414635-56414889:+|nuORF	ENST00000578025.5_1_17:56414635-56414889:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.25390625	2	464.252046	926.489538	0.72749	0.00033774	3.541	0.0016439	4.2685	0.0019816	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.67345	1	8645	8645		42.396	1.618	1	1578600			17855	14075	12014	12023	20636	20636					0.02335326651109426
ILPSSFSVKK	10	Unmodified	_ILPSSFSVKK_					0	0	0			REV__ENSG00000198798|ENST00000361644|MAGEB3	REV__ENSG00000198798|ENST00000361644|MAGEB3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.33251953125	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.86718	1	9823	9823		27.882	1.1893	1	2365500	+		17856	23386	12015	12024	20637	20637					0.10615462062582992
ILPTFYML	8	Unmodified	_ILPTFYML_					0	0	0		ENST00000268795.5_1_16:68025739-68025916:-|nuORF	ENST00000268795.5_1_16:68025739-68025916:-|nuORF	ENST00000268795.5_1_16:68025739-68025916:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	499.2768249511719	2	499.274989	996.535426	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.247	1	78.247	77.747	78.747	0								0	0	0	0.29353	1	7152	7152		28.254	1.4582	1				17857	9543	12016	12025	20638	20638					0.03701971833334028
ILPTIDELI	9	Unmodified	_ILPTIDELI_					0	0	0			REV__ENSG00000105926|ENST00000222644|PALS2	REV__ENSG00000105926|ENST00000222644|PALS2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.2535400390625	2	513.807708	1025.60086	0.40454	0.00020786	3.0839	0.0015845	3.4884	0.0017924	513.8085035970853	55.341	1.3404	55.432	54.473	55.813	0.091167					42	37	2	0	0	0	0.20789	1	4555	4555		33.516	3.674	1	169020	+		17858	17581	12017	12026	20639	20639					0.08908664560044599
ILPTKETLP	9	Unmodified	_ILPTKETLP_					0	0	0		ENSG00000177485|ENST00000557385|ZBTB33	ENSG00000177485|ENST00000557385|ZBTB33	ENSG00000177485|ENST00000557385|ZBTB33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3085021972656	2	506.307875	1010.6012	-0.4302	-0.00021782	2.8218	0.0014287	2.3916	0.0012109	506.3092413243001	54.85	1.3019	54.801	54.615	55.917	-0.049271					56	42	2	0	0	0	0.78124	1	4652	4652		30.318	5.7985	1	188390			17859	7144	12018	12027	20640	20640					0.0963208427989457
ILPTLVIIIG	10	Unmodified	_ILPTLVIIIG_					0	0	0			REV__ENSG00000204704|ENST00000377175|OR2W1	REV__ENSG00000204704|ENST00000377175|OR2W1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3607177734375	2	526.359911	1050.70527	0.76967	0.00040513	1.4348	0.00075522	2.2045	0.0011603	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.86452	1	2457	2457		30.504	7.4612	1	7968500	+		17860	23518	12019	12028	20641	20641					0.1819441110740172
ILPTLVIIIG	10	Unmodified	_ILPTLVIIIG_					0	0	0			REV__ENSG00000204704|ENST00000377175|OR2W1	REV__ENSG00000204704|ENST00000377175|OR2W1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.361328125	2	526.359911	1050.70527	1.1443	0.00060234	1.4578	0.00076731	2.6021	0.0013697	526.3605227402171	34.131	1.7657	34.341	33.942	35.708	0.21003					136	43	4	0	0	0	0.84874	1	2569	2569		18.324	0	1	7568500	+		17861	23518	12019	12028	20642	20642					0.1819441110740172
ILPTLVIIIG	10	Unmodified	_ILPTLVIIIG_					0	0	0			REV__ENSG00000204704|ENST00000377175|OR2W1	REV__ENSG00000204704|ENST00000377175|OR2W1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3607177734375	2	526.359911	1050.70527	1.1443	0.00060234	1.4578	0.00076731	2.6021	0.0013697	526.3605227402171	34.131	1.7657	34.341	33.942	35.708	0.21003					136	43	4	0	0	0	0.37624	1	2457	2457		30.504	13.139	1	7568500	+		17862	23518	12019	12028	20643	20643					0.1819441110740172
ILPTLVIIIG	10	Unmodified	_ILPTLVIIIG_					0	0	0			REV__ENSG00000204704|ENST00000377175|OR2W1	REV__ENSG00000204704|ENST00000377175|OR2W1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3614501953125	2	526.359911	1050.70527	1.3753	0.00072391	1.3078	0.00068837	2.6831	0.0014123	526.3604424502926	34.187	1.5135	34.492	34.159	35.672	0.30494					130	37	5	0	0	0	0.86201	1	2558	2558		24.203	0	1	5570700	+		17863	23518	12019	12028	20644	20644					0.1819441110740172
ILPTTRRS	8	Unmodified	_ILPTTRRS_					0	0	0			REV__ENST00000246662.8_1_17:39726462-39727664:-|nuORF	REV__ENST00000246662.8_1_17:39726462-39727664:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2886657714844	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.86791	1	10223	10223		28.254	3.7503	1	48696000	+		17864	24262	12020	12029	20645	20645					0.0874858239999412
ILPVIMII	8	Unmodified	_ILPVIMII_					0	0	0		nc|ENSG00000291104|Q96KV6|BTN2A3P;ENST00000463944.1_1_6:26426426-26428241:+|nuORF	nc|ENSG00000291104|Q96KV6|BTN2A3P	nc|ENSG00000291104|Q96KV6|BTN2A3P	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3006896972656	2	456.30355	910.592547	-1.9609	-0.00089476	-3.2695	-0.0014919	-5.2304	-0.0023866	456.3019244318546	33.431	1.5568	33.431	33.135	34.692	0					145	44	4	0	0	0	0.80127	1	1859	1859		16.705	0	1	2313000			17865	15346	12021	12030	20646	20646					0.1336743910972018
ILPVIMIILMI	11	Unmodified	_ILPVIMIILMI_					0	0	0		nc|ENSG00000291104|Q96KV6|BTN2A3P;ENST00000463944.1_1_6:26426426-26428241:+|nuORF	nc|ENSG00000291104|Q96KV6|BTN2A3P	nc|ENSG00000291104|Q96KV6|BTN2A3P	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3768310546875	2	634.907856	1267.80116	1.3435	0.00085302	-0.19347	-0.00012284	1.1501	0.00073018	635.4090329213449	117.93	0.18715	117.95	117.78	117.97	0.026466					5	4	2	0	0	0	0.1766	1	12959	12959		17.365	0	1	29636			17866	15346	12022	12031	20647	20647					0.17797099631638957
ILQCLREN	8	Unmodified	_ILQCLREN_					0	0	0		ENST00000602760.1_1_2:114647100-114647259:-|nuORF	ENST00000602760.1_1_2:114647100-114647259:-|nuORF	ENST00000602760.1_1_2:114647100-114647259:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7673645019531	2	494.765852	987.51715	1.0023	0.00049592	2.9804	0.0014746	3.9827	0.0019705	494.7672897530766	36.426	1.4404	36.866	36.615	38.056	0.44043					65	34	2	0	0	0	0.92457	1	2885	2885		47.916	8.6628	1	588210			17867	14413	12023	12032	20648	20648					0.02289229911343682
ILQFLANSYLT	11	Unmodified	_ILQFLANSYLT_					0	0	0			REV__nc|ENSG00000104635|Q15043-2|SLC39A14	REV__nc|ENSG00000104635|Q15043-2|SLC39A14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3621826171875	2	641.855721	1281.69689	1.7061	0.001095	4.3829	0.0028132	6.089	0.0039082	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.45916	11	12549	12497;12544;12549;12599;12634;12639;12813;12836;12842;12867;13079		54.776	13.998	1	27133000	+		17868	17465	12024	12033	20649;20650;20651;20652;20653;20654;20655;20656;20657;20658;20659	20651					0.0673081240013289
ILQFLANSYLT	11	Unmodified	_ILQFLANSYLT_					0	0	0			REV__nc|ENSG00000104635|Q15043-2|SLC39A14	REV__nc|ENSG00000104635|Q15043-2|SLC39A14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8626098632812	2	641.855721	1281.69689	0.94116	0.00060409	4.0087	0.002573	4.9499	0.0031771	642.3596969361647	118.8	0.19493	118.86	118.79	118.98	0.060577					15	7	3	0	0	0	0.69995	1	12487	12487		31.53	3.6476	1	181430	+		17869	17465	12024	12033	20660	20660					0.0673081240013289
ILQFLANSYLT	11	Unmodified	_ILQFLANSYLT_					0	0	0			REV__nc|ENSG00000104635|Q15043-2|SLC39A14	REV__nc|ENSG00000104635|Q15043-2|SLC39A14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3568115234375	2	641.855721	1281.69689	7.1265	0.0045742	-1.103	-0.00070794	6.0235	0.0038662	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.69995	1	13856	13856		31.53	1.2121	1	98705	+		17870	17465	12024	12033	20661	20661					0.0673081240013289
ILQFLANSYLT	11	Unmodified	_ILQFLANSYLT_					0	0	0			REV__nc|ENSG00000104635|Q15043-2|SLC39A14	REV__nc|ENSG00000104635|Q15043-2|SLC39A14	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	641.855721	1281.69689	-0.051302	-3.2928E-05	5.252	0.0033711	5.2007	0.0033381	642.3611421751622	119.2	0.063141	119.12	119.06	119.13	-0.07531	0.13126	0.0011542	NaN	31.53	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186920	+		17871	17465	12024	12033							0.0673081240013289
ILQFLANSYLT	11	Unmodified	_ILQFLANSYLT_					0	0	0			REV__nc|ENSG00000104635|Q15043-2|SLC39A14	REV__nc|ENSG00000104635|Q15043-2|SLC39A14	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	641.855721	1281.69689	0.94116	0.00060409	4.0087	0.002573	4.9499	0.0031771	642.3596969361647	118.8	0.19493	118.86	118.79	118.98	0.060577	-0.13126	-0.00044186	NaN	31.53	15	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181430	+		17872	17465	12024	12033							0.0673081240013289
ILQFPSWMA	9	Unmodified	_ILQFPSWMA_					0	0	0		chr18:24694999-24705644|34|49.32|0.0|22.23|+|1|LINC01915,LINC01915|2	chr18:24694999-24705644|34|49.32|0.0|22.23|+|1|LINC01915,LINC01915|2	chr18:24694999-24705644|34|49.32|0.0|22.23|+|1|LINC01915,LINC01915|2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8401489257812	2	546.78097	1091.54739	0.84789	0.00046361	2.6759	0.0014631	3.5238	0.0019268	546.781789373569	100.81	0.40336	100.95	100.69	101.09	0.14352					13	9	2	0	0	0	0.20789	1	10531	10531		65.803	21.686	1	50669			17873	248	12025	12034	20662	20662					0.005275885765513522
ILQGSVGFD	9	Unmodified	_ILQGSVGFD_					0	0	0			REV__ENSG00000126934|ENST00000262948|MAP2K2	REV__ENSG00000126934|ENST00000262948|MAP2K2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2446594238281	2	468.245275	934.475997	2.7938	0.0013082	-3.9178	-0.0018345	-1.124	-0.00052631	468.2433163822993	105.83	2.1976	105.79	104.81	107.01	-0.03714					128	51	4	0	0	0	0.78058	1	11657	11657		30.504	1.3541	1	2085200	+		17874	18718	12026	12035	20663	20663					0.006137921435197313
ILQIVSPV	8	Unmodified	_ILQIVSPV_					0	0	0		nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;nc|ENSG00000061987|Q7Z3U7-5|MON2;ENSG00000061987|ENST00000393630|MON2;nc|ENSG00000061987|Q7Z3U7-3|MON2;ENST00000551307.5_1_12:62954224-62986526:+|nuORF	nc|ENSG00000061987|Q7Z3U7-2|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7800598144531	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.86791	1	2709	2709		28.254	1.4582	1	2524800			17875	1080	12027	12036	20664	20664					0.10388447425282266
ILQKETGLH	9	Unmodified	_ILQKETGLH_					0	0	0			REV__ENSG00000113300|ENST00000261951|CNOT6	REV__ENSG00000113300|ENST00000261951|CNOT6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.82080078125	2	519.800749	1037.58694	0.11726	6.0952E-05	2.7525	0.0014308	2.8698	0.0014917	519.8021859368713	84.484	0.2036	84.919	84.859	85.063	0.43538					6	4	2	0	0	0	0.20789	1	9835	9835		68.787	17.451	1	46840	+		17876	17988	12028	12037	20665	20665					0.06965431851608628
ILQKLREIEKN	11	Unmodified	_ILQKLREIEKN_					0	0	0			REV__ENSG00000096696|ENST00000379802|DSP	REV__ENSG00000096696|ENST00000379802|DSP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.9484558105469	3	461.948793	1382.82455	0.76558	0.00035366	-1.7922	-0.00082791	-1.0266	-0.00047425	461.9479074956451	104.93	2.309	105.04	104.7	107.01	0.10766					127	56	3	0	0	0	0.76579	1	11180	11180		18.531	4.445	1	1259300	+		17877	17077	12029	12038	20666	20666					0.14844952994189953
ILQKLREIEKN	11	Unmodified	_ILQKLREIEKN_					0	0	0			REV__ENSG00000096696|ENST00000379802|DSP	REV__ENSG00000096696|ENST00000379802|DSP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.9483642578125	3	461.948793	1382.82455	-1.7389	-0.00080328	0.70201	0.00032429	-1.0369	-0.00047899	461.9491276210282	107.85	0.72025	107.89	107.25	107.97	0.036125					70	17	5	0	0	0	0.76892	1	11480	11480		17.833	0.36513	1	82858000	+		17878	17077	12029	12038	20667	20667					0.14844952994189953
ILQKNVPIL	9	Unmodified	_ILQKNVPIL_					0	0	0		ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1	ENSG00000044115|ENST00000302763|CTNNA1	ENSG00000044115|ENST00000302763|CTNNA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.2807006835938	2	519.33951	1036.66447	0.65658	0.00034099	-0.92168	-0.00047866	-0.2651	-0.00013768	519.3390683000653	55.681	0.53736	56.082	55.782	56.319	0.40101					17	12	2	0	0	0	0.20789	1	5714	5714		47.916	10.756	1	186650			17879	947	12030	12039	20668	20668					0.14760069787803332
ILQPLKVSIQR	11	Unmodified	_ILQPLKVSIQR_					0	0	0			REV__ENST00000435941.1_1_X:122250823-122251621:-|nuORF	REV__ENST00000435941.1_1_X:122250823-122251621:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5977783203125	3	432.278362	1293.81326	-1.5766	-0.00068152	2.6668	0.0011528	1.0903	0.0004713	432.61254377431777	106.01	0.73121	106.16	105.87	106.6	0.14843					41	17	3	0	0	0	0.1745	1	11390	11390		17.833	0	1	333280	+		17880	26686	12031	12040	20669	20669					0.1781017569069263
ILQQLVWRR	9	Unmodified	_ILQQLVWRR_					0	0	0			REV__ENST00000467511.1_1_9:72346973-72349163:-|nuORF	REV__ENST00000467511.1_1_9:72346973-72349163:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	606.3711547851562	2	606.372207	1210.72986	-0.28087	-0.00017031	-4.0857	-0.0024774	-4.3666	-0.0026478	606.369636454931	94.737	2.9757	94.737	93.326	96.302	0					126	69	2	0	0	0	0.7932	1	9362	9362		24.203	2.2429	1	318720	+		17881	23019	12032	12041	20670	20670					0.13292484033490837
ILQRLISGSTL	11	Unmodified	_ILQRLISGSTL_					0	0	0			REV__ENSG00000101544|ENST00000262198|ADNP2	REV__ENSG00000101544|ENST00000262198|ADNP2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9147033691406	3	400.915201	1199.72377	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.58	1	113.6	113.1	114.1	0.020027								0	0	0	0.56276	1	13714	13714		24.232	5.7008	1		+		17882	17288	12033	12042	20671	20671					0.13189921011348815
ILQSAALP	8	Unmodified	_ILQSAALP_					0	0	0		ENSG00000059804|ENST00000075120|SLC2A3;nc|ENSG00000173262|Q8TDB8-4|SLC2A14;ENSG00000173262|ENST00000431042|SLC2A14;nc|ENSG00000173262|Q8TDB8|SLC2A14;nc|ENSG00000173262|Q8TDB8-5|SLC2A14;ENST00000486749.5_1_12:8083049-8088630:-|nuORF	ENSG00000059804|ENST00000075120|SLC2A3	ENSG00000059804|ENST00000075120|SLC2A3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7496643066406	2	406.747453	811.480354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.624	1	15.541	15.041	16.041	-0.083363								0	0	0	0.29199	1	62	62		29.842	1.5873	1				17883	1058	12034	12043	20672	20672					0.06707301357084816
ILQSQFPFLE	10	Unmodified	_ILQSQFPFLE_					0	0	0			REV__ENST00000256682.8_1_12:49330571-49330871:-|nuORF	REV__ENST00000256682.8_1_12:49330571-49330871:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3307495117188	2	611.329339	1220.64412	-0.91836	-0.00056142	0.68914	0.00042129	-0.22922	-0.00014013	611.32977638209	78.511	1.062	78.605	78.288	79.35	0.0942					75	32	4	0	0	0	0.80179	1	7367	7367		39.253	6.5023	1	422640	+		17884	24330	12035	12044	20673	20673					0.04262854337321187
ILQSRGCTR	9	Unmodified	_ILQSRGCTR_					0	0	0			REV__nc|ENSG00000123607|Q7Z4L5-2|TTC21B	REV__nc|ENSG00000123607|Q7Z4L5-2|TTC21B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.27685546875	2	517.2822	1032.54985	0.022982	1.1888E-05	-1.9659	-0.0010169	-1.9429	-0.001005	517.280431723067	72.873	0.32977	73.427	73.15	73.479	0.55386					10	7	2	0	0	0	0.20789	1	8156	8156		40.778	7.2626	1	50452	+		17885	18548	12036	12045	20674	20674					0.03487437034209506
ILQTIQDFTI	10	Unmodified	_ILQTIQDFTI_					0	0	0		ENSG00000170456|ENST00000389082|DENND5B;nc|ENSG00000170456|Q6ZUT9-2|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.332763671875	2	596.334621	1190.65469	0.85589	0.0005104	-3.7538	-0.0022385	-2.8979	-0.0017281	596.3322598839247	96.043	3.1049	96.206	95.311	98.416	0.16316					228	72	4	0	0	0	0.82886	1	9832	9832		37.812	1.3648	1	1469100			17886	6592	12037	12046	20675	20675					0.06698836991768076
ILQVVITRLKL	11	Unmodified	_ILQVVITRLKL_					0	0	0		chr17:8377692-8378589|61|1325.34|0.0|26.98|-|0|RPL26,None|1	chr17:8377692-8378589|61|1325.34|0.0|26.98|-|0|RPL26,None|1	chr17:8377692-8378589|61|1325.34|0.0|26.98|-|0|RPL26,None|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3933715820312	2	648.442298	1294.87004	0.9445	0.00061246	-0.055302	-3.586E-05	0.8892	0.0005766	648.4436450388591	107.31	0.24105	107.4	107.26	107.5	0.091255					8	5	2	0	0	0	0.17779	1	11501	11501		18.262	4.125	1	105980			17887	246	12038	12047	20676	20676					0.23440223247212089
ILREVCRVLRP	11	Unmodified	_ILREVCRVLRP_					0	0	0		ENSG00000185432|ENST00000332160|METTL7A	ENSG00000185432|ENST00000332160|METTL7A	ENSG00000185432|ENST00000332160|METTL7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9435119628906	3	451.943096	1352.80746	0.2172	9.8162E-05	-0.041578	-1.8791E-05	0.17562	7.9371E-05	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.76579	1	4621	4621		18.531	2.6104	1	771970			17888	7713	12039	12048	20677	20677					0.14516753907378188
ILRFIAPN	8	Unmodified	_ILRFIAPN_					0	0	0			REV__ENSG00000139163|ENST00000266517|ETNK1	REV__ENSG00000139163|ENST00000266517|ETNK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28717041015625	2	472.28982	942.565087	-0.108	-5.1006E-05	-4.4569	-0.0021049	-4.5649	-0.0021559	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.85277	1	10229	10229		25.45	1.2474	1	46909000	+		17889	19519	12040	12049	20678	20678					0.09150671893701201
ILRGGGRF	8	Unmodified	_ILRGGGRF_					0	0	0			REV__ENSG00000198753|ENST00000361971|PLXNB3	REV__ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.261962890625	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.86288	1	2701	2701		26.796	6.3143	1	3384400	+		17890	23374	12041	12050	20679	20679					0.07144347919654592
ILRIPSASQRK	11	Unmodified	_ILRIPSASQRK_					0	0	0		ENSG00000205329|ENST00000641740|OR6C3	ENSG00000205329|ENST00000641740|OR6C3	ENSG00000205329|ENST00000641740|OR6C3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.25079345703125	3	423.598094	1267.77245	-1.87	-0.00079214	0.26064	0.00011041	-1.6094	-0.00068174	423.5987731944527	107.15	0.56754	107.19	106.76	107.33	0.036118					27	13	3	0	0	0	0.1745	1	11432	11432		17.833	0	1	146740			17891	8525	12042	12051	20680	20680					0.1492783437106482
ILRIRGYVF	9	Unmodified	_ILRIRGYVF_					0	0	0		ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.853759765625	2	568.850576	1135.6866	2.887	0.0016423	1.5046	0.00085587	4.3916	0.0024981	568.8513377958367	102.33	3.4335	102.28	101.79	105.22	-0.047005					328	82	6	0	0	0	0.64338	14	11133	11133;11145;11157;11205;11300;11326;11362;11374;11386;11398;11422;11434;11446;11472		44.531	13.777	1	53482000			17892	8090	12043	12052	20681;20682;20683;20684;20685;20686;20687;20688;20689;20690;20691;20692;20693;20694	20681					0.12418294256212903
ILRIRGYVF	9	Unmodified	_ILRIRGYVF_					0	0	0		ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.853271484375	2	568.850576	1135.6866	1.5207	0.00086506	2.9075	0.0016539	4.4282	0.002519	568.8521463691729	102.21	3.6255	102.25	101.63	105.26	0.04319					340	87	6	0	0	0	0.64338	15	11078	11006;11042;11078;11126;11138;11148;11173;11186;11198;11223;11270;11294;11306;11318;11343		44.531	18.613	1	51352000			17893	8090	12043	12052	20695;20696;20697;20698;20699;20700;20701;20702;20703;20704;20705;20706;20707;20708;20709	20697					0.12418294256212903
ILRIRGYVF	9	Unmodified	_ILRIRGYVF_					0	0	0		ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8529052734375	2	568.850576	1135.6866	0.5226	0.00029728	3.8523	0.0021914	4.3749	0.0024887	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.49378	7	10716	10681;10692;10716;10800;10874;10951;10975		52.299	16.681	1	84800000			17894	8090	12043	12052	20710;20711;20712;20713;20714;20715;20716	20712					0.12418294256212903
ILRIRGYVF	9	Unmodified	_ILRIRGYVF_					0	0	0		ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8531494140625	2	568.850576	1135.6866	0.87009	0.00049495	3.5097	0.0019965	4.3798	0.0024914	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.64338	11	10744	10697;10708;10720;10744;10768;10792;10852;10961;10973;11021;11047		44.531	10.359	1	78933000			17895	8090	12043	12052	20717;20718;20719;20720;20721;20722;20723;20724;20725;20726;20727	20720					0.12418294256212903
ILRIRGYVF	9	Unmodified	_ILRIRGYVF_					0	0	0		ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.853759765625	2	568.850576	1135.6866	1.7478	0.00099421	3.3371	0.0018983	5.0849	0.0028925	568.8523613579124	101.92	1.2121	102.19	101.8	103.01	0.26323					121	31	5	0	0	0	0.67235	2	12344	12344;12356		42.474	10.52	1	9323000			17896	8090	12043	12052	20728;20729	20728					0.12418294256212903
ILRIRGYVF	9	Unmodified	_ILRIRGYVF_					0	0	0		ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.8533935546875	2	568.850576	1135.6866	3.5879	0.002041	1.4506	0.0008252	5.0386	0.0028662	568.851249822681	101.98	1.2018	102.3	101.89	103.1	0.32511					111	29	5	0	0	0	0.76402	2	12413	12413;12425		35.201	1.0282	1	10281000			17897	8090	12043	12052	20730;20731	20730					0.12418294256212903
ILRKDPEI	8	Unmodified	_ILRKDPEI_					0	0	0		ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A	ENSG00000042781|ENST00000307340|USH2A	ENSG00000042781|ENST00000307340|USH2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.297607421875	2	492.297842	982.581131	0.010803	5.3184E-06	-0.45723	-0.0002251	-0.44643	-0.00021978	492.2974871625459	54.049	1.8007	54.456	53.861	55.661	0.40663					79	42	3	0	0	0	0.84634	1	5477	5477		60.294	5.5176	1	1817100			17898	938	12044	12053	20732	20732					0.08914333339930636
ILRKMPPRV	9	Unmodified	_ILRKMPPRV_					0	0	0		ENSG00000188783|ENST00000343110|PRELP	ENSG00000188783|ENST00000343110|PRELP	ENSG00000188783|ENST00000343110|PRELP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3535766601562	2	555.352428	1108.6903	0.32258	0.00017915	1.0861	0.0006032	1.4087	0.00078234	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.7932	1	10521	10521		18.324	1.8513	1	7708500			17899	7960	12045	12054	20733	20733					0.14030640758414847
ILRKQKLIFLH	11	Unmodified	_ILRKQKLIFLH_					0	0	0		ENSG00000170522|ENST00000302274|ELOVL6	ENSG00000170522|ENST00000302274|ELOVL6	ENSG00000170522|ENST00000302274|ELOVL6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.3109436035156	3	470.309885	1407.90782	-1.0845	-0.00051006	4.1386	0.0019464	3.0541	0.0014364	470.3118043400699	16.431	0.36591	16.479	16.402	16.767	0.047802					29	15	3	0	0	0	0.80593	1	153	153		10.104	0.45776	1	178620			17900	6597	12046	12055	20734	20734					0.22018734232688075
ILRLFFFQVID	11	Unmodified	_ILRLFFFQVID_					0	0	0		ENST00000412082.6_1_16:20935625-20935910:+|nuORF	ENST00000412082.6_1_16:20935625-20935910:+|nuORF	ENST00000412082.6_1_16:20935625-20935910:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.2751770019531	3	470.942979	1409.80711	-0.80262	-0.00037799	2.3492	0.0011064	1.5466	0.00072837	471.27921156372054	62.441	0.16317	62.464	62.419	62.582	0.022987					10	7	2	0	0	0	0.17955	1	5443	5443		17.833	0	1	48167			17901	11335	12047	12056	20735	20735					0.11859657459149275
ILRLLCISCN	10	Unmodified	_ILRLLCISCN_					0	0	0		ENST00000382004.7_1_9:3221866-3221968:-|nuORF	ENST00000382004.7_1_9:3221866-3221968:-|nuORF	ENST00000382004.7_1_9:3221866-3221968:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3194580078125	2	574.319937	1146.62532	0.59155	0.00033974	-1.3409	-0.00077012	-0.74936	-0.00043037	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.85934	1	9679	9679		35.618	0.46626	1	1777600			17902	10967	12048	12057	20736	20736					0.057872781702826614
ILRLSLDYP	9	Unmodified	_ILRLSLDYP_					0	0	0		ENSG00000162415|ENST00000359600|ZSWIM5	ENSG00000162415|ENST00000359600|ZSWIM5	ENSG00000162415|ENST00000359600|ZSWIM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3212280273438	2	545.318774	1088.623	-1.465	-0.00079892	-2.4047	-0.0013113	-3.8697	-0.0021102	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.78536	1	8490	8490		29.15	0	1	4998200			17903	5686	12049	12058	20737	20737					0.08222889028456848
ILRLSSFIN	9	Unmodified	_ILRLSSFIN_					0	0	0			REV__nc|ENSG00000133107|Q9UBN4-4|TRPC4	REV__nc|ENSG00000133107|Q9UBN4-4|TRPC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8171997070312	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.74721	1	8592	8592		37.159	1.5408	1	4022300	+		17904	19056	12050	12059	20738	20738					0.09498308748334239
ILRLSTALAR	10	Unmodified	_ILRLSTALAR_					0	0	0		ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7	ENSG00000166508|ENST00000303887|MCM7	ENSG00000166508|ENST00000303887|MCM7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.2939453125	2	557.358765	1112.70298	0.13491	7.5193E-05	-1.7366	-0.00096793	-1.6017	-0.00089274	557.3574265477786	18.23	0.36685	17.608	17.355	17.722	-0.62141					11	7	2	0	0	0	0.37624	1	377	377		29.17	0.020503	1	43464			17905	6204	12051	12060	20739	20739					0.151133754222883
ILRLTAAEDRG	11	Unmodified	_ILRLTAAEDRG_					0	0	0			REV__ENSG00000137877|ENST00000320955|SPTBN5	REV__ENSG00000137877|ENST00000320955|SPTBN5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.56439208984375	3	405.566571	1213.67788	-1.5858	-0.00064316	-3.0129	-0.0012219	-4.5987	-0.0018651	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.74405	1	5270	5270		23.378	2.3457	1	181560	+		17906	19422	12052	12061	20740	20740					0.07959275829057333
ILRPDVQRRV	10	Unmodified	_ILRPDVQRRV_					0	0	0		ENST00000433633.1_1_22:42546889-42547480:-|nuORF	ENST00000433633.1_1_22:42546889-42547480:-|nuORF	ENST00000433633.1_1_22:42546889-42547480:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3906860351562	2	626.385845	1250.75714	2.3128	0.0014487	-2.3561	-0.0014758	-0.043276	-2.7107E-05	626.8860681580434	110.01	1.5052	110.06	109.66	111.17	0.054062					106	56	2	0	0	0	0.86718	1	13310	13310		27.882	1.1893	1	1083000			17907	11687	12053	12062	20741	20741					0.14178967573889167
ILRPNERQLI	10	Unmodified	_ILRPNERQLI_					0	0	0			REV__nc|ENSG00000242110|Q9UHK6-4|AMACR	REV__nc|ENSG00000242110|Q9UHK6-4|AMACR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.9224548339844	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.85466	1	11417	11417		20.03	0	1	19495000	+		17908	23829	12054	12063	20742	20742					0.13056145479754377
ILRQAVELLAK	11	Unmodified	_ILRQAVELLAK_					0	0	0			REV__ENST00000409449.5_1_2:201750469-201754005:-|nuORF	REV__ENST00000409449.5_1_2:201750469-201754005:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.6046142578125	3	418.602845	1252.78671	2.3213	0.0009717	1.6325	0.00068335	3.9537	0.001655	418.6036475411712	49.177	2.7288	49.177	48.189	50.918	0.00016785					111	67	3	0	0	0	0.75121	1	4081	4081		21.78	2.5177	1	107990	+		17909	26346	12055	12064	20743	20743					0.17042486799368817
ILRRARPPAS	10	Unmodified	_ILRRARPPAS_					0	0	0		ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8538818359375	2	568.854181	1135.69381	-1.1637	-0.000662	-0.61846	-0.00035181	-1.7822	-0.0010138	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.80179	3	11212	10999;11011;11212		39.253	6.4404	1	50786000			17910	9990	12056	12065	20744;20745;20746	20746					0.1313902685665198
ILRRARPPAS	10	Unmodified	_ILRRARPPAS_					0	0	0		ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.85302734375	2	568.854181	1135.69381	1.5207	0.00086506	-3.4304	-0.0019514	-1.9097	-0.0010863	568.8521463691729	102.21	3.6255	102.25	101.63	105.26	0.04319					340	87	6	0	0	0	0.74274	5	11030	11030;11066;11090;11102;11258		42.396	6.7778	1	51352000			17911	9990	12056	12065	20747;20748;20749;20750;20751	20747					0.1313902685665198
ILRRARPPAS	10	Unmodified	_ILRRARPPAS_					0	0	0		ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8544311523438	2	568.854181	1135.69381	0.52259	0.00029728	-2.4856	-0.0014139	-1.963	-0.0011166	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.71042	6	10862	10728;10764;10776;10812;10862;10999		44.117	8.4985	1	84800000			17912	9990	12056	12065	20752;20753;20754;20755;20756;20757	20756					0.1313902685665198
ILRRARPPAS	10	Unmodified	_ILRRARPPAS_					0	0	0		ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.85302734375	2	568.854181	1135.69381	0.87008	0.00049495	-2.8282	-0.0016088	-1.9581	-0.0011139	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.85934	6	10732	10732;10756;10816;10828;10865;10877		35.618	8.8222	1	78933000			17913	9990	12056	12065	20758;20759;20760;20761;20762;20763	20758					0.1313902685665198
ILRRARPPAS	10	Unmodified	_ILRRARPPAS_					0	0	0		ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8535766601562	2	568.854181	1135.69381	-1.3907	-0.00079112	-0.55616	-0.00031637	-1.9469	-0.0011075	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.71042	7	10712	10652;10664;10712;10760;10772;10789;10824		44.117	4.5846	1	72465000			17914	9990	12056	12065	20764;20765;20766;20767;20768;20769;20770	20766					0.1313902685665198
ILRRARPPAS	10	Unmodified	_ILRRARPPAS_					0	0	0		ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	ENST00000317147.9_1_16:58633233-58633290:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.8534545898438	2	568.854181	1135.69381	1.7477	0.00099421	-3.0008	-0.001707	-1.253	-0.00071279	568.8523613579124	101.92	1.2121	102.19	101.8	103.01	0.26323					121	31	5	0	0	0	0.71042	2	12368	12368;12380		44.117	8.8806	1	9323000			17915	9990	12056	12065	20771;20772	20771					0.1313902685665198
ILRRKTPRHKQ	11	Unmodified	_ILRRKTPRHKQ_					0	0	0		nc|ENSG00000181577|Q8N319|LINC03040	nc|ENSG00000181577|Q8N319|LINC03040	nc|ENSG00000181577|Q8N319|LINC03040	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.3027648925781	3	478.303904	1431.88988	-0.48825	-0.00023353	-1.5506	-0.00074167	-2.0389	-0.0009752	478.30300632886104	67.214	1.2093	67.178	66.747	67.957	-0.035698					104	51	3	0	0	0	0.77511	1	6434	6434		16.53	6.8837	1	289200			17916	15135	12057	12066	20773	20773					0.1912141203054034
ILRRLFSF	8	Unmodified	_ILRRLFSF_					0	0	0			REV__ENSG00000173769|ENST00000309765|TOPAZ1	REV__ENSG00000173769|ENST00000309765|TOPAZ1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3245849609375	2	526.324194	1050.63383	-0.57189	-0.000301	1.3797	0.00072616	0.80779	0.00042516	526.3247721642527	60.788	0.97792	60.82	59.95	60.927	0.031197					34	27	2	0	0	0	0.4196	1	5605	5605		19.36	0	1	55418	+		17917	21950	12058	12067	20774	20774					0.110543361934333
ILRRSPGTG	9	Unmodified	_ILRRSPGTG_					0	0	0		ENSG00000169562|ENST00000361726|GJB1	ENSG00000169562|ENST00000361726|GJB1	ENSG00000169562|ENST00000361726|GJB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.78533935546875	2	478.785433	955.556313	-0.82627	-0.00039561	1.1015	0.00052738	0.27522	0.00013177	478.7856844089399	92.054	2.1406	92.275	91.382	93.522	0.22157					110	50	4	0	0	0	0.73802	1	9313	9313		37.812	4.3185	1	787100			17918	6505	12059	12068	20775	20775					0.07675698257241947
ILRTSARTT	9	Unmodified	_ILRTSARTT_					0	0	0			REV__ENSG00000144339|ENST00000272771|TMEFF2	REV__ENSG00000144339|ENST00000272771|TMEFF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80474853515625	2	509.803823	1017.59309	-0.93407	-0.00047619	0.87176	0.00044443	-0.062308	-3.1765E-05	509.8042014095356	84.682	2.4835	84.682	83.134	85.618	0					128	59	3	0	0	0	0.69624	1	8113	8113		40.778	1.7567	1	609880	+		17919	19882	12060	12069	20776	20776					0.08499950083125896
ILRTSARTT	9	Unmodified	_ILRTSARTT_					0	0	0			REV__ENSG00000144339|ENST00000272771|TMEFF2	REV__ENSG00000144339|ENST00000272771|TMEFF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8033142089844	2	509.803823	1017.59309	0.66528	0.00033916	-0.96062	-0.00048973	-0.29535	-0.00015057	509.80330176373235	84.326	2.5006	84.474	83.057	85.557	0.14794					163	57	4	0	0	0	0.76255	1	8280	8280		35.618	3.6634	1	928020	+		17920	19882	12060	12069	20777	20777					0.08499950083125896
ILRVLEGM	8	Unmodified	_ILRVLEGM_					0	0	0			REV__ENSG00000159399|ENST00000290573|HK2	REV__ENSG00000159399|ENST00000290573|HK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7773132324219	2	465.775688	929.536823	-0.087401	-4.0709E-05	4.1075	0.0019132	4.0201	0.0018725	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.91005	1	8064	8064		42.474	1.9018	1	1330000	+		17921	20658	12061	12070	20778	20778					0.06923605922122533
ILRVTKHEKN	10	Unmodified	_ILRVTKHEKN_					0	0	0			REV__ENST00000359028.6_1_7:91622214-91622265:+|nuORF	REV__ENST00000359028.6_1_7:91622214-91622265:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.3703002929688	2	619.372404	1236.73025	0.91931	0.0005694	-1.0988	-0.00068059	-0.17952	-0.00011119	619.3720836676316	101.53	1.7011	101.67	101.29	102.99	0.14102					92	41	4	0	0	0	0.86587	1	10629	10629		29.17	3.596	1	2053400	+		17922	25449	12062	12071	20779	20779					0.12135858962687962
ILRYVMERK	9	Unmodified	_ILRYVMERK_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3525390625	2	604.352625	1206.6907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.369	1	82.523	82.023	83.023	0.15474								0	0	0	0.30053	1	7924	7924		30.504	3.8107	1				17923	8866	12063	12072	20780	20780					0.09562015687606618
ILRYVNPGT	9	Unmodified	_ILRYVNPGT_					0	0	0		nc|ENSG00000053747|Q16787-3|LAMA3;ENSG00000053747|ENST00000313654|LAMA3	nc|ENSG00000053747|Q16787-3|LAMA3	nc|ENSG00000053747|Q16787-3|LAMA3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7930908203125	2	516.795466	1031.57638	-0.83709	-0.0004326	-3.0347	-0.0015683	-3.8718	-0.0020009	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.7932	1	8481	8481		24.203	1.1603	1	490270			17924	1010	12064	12073	20781	20781					0.06185449197187154
ILSCCVPKMS	10	Unmodified	_ILSCCVPKMS_					0	0	0		ENST00000435030.1_2:149880865-149881021:+|nuORF	ENST00000435030.1_2:149880865-149881021:+|nuORF	ENST00000435030.1_2:149880865-149881021:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.7649536132812	2	540.766148	1079.51774	0.38191	0.00020652	-3.4134	-0.0018458	-3.0315	-0.0016393	540.7639824016669	49.748	1.0598	49.79	49.305	50.365	0.042236					35	25	2	0	0	0	0.67571	1	3875	3875		45.972	6.7194	1	187480			17925	11705	12065	12074	20782	20782					-0.018834347554729902
ILSDDNFNL	9	Unmodified	_ILSDDNFNL_					0	0	0		ENSG00000163491|ENST00000691995|NEK10;nc|ENSG00000163491|Q6ZWH5|NEK10;nc|ENSG00000163491|Q6ZWH5-7|NEK10;ENST00000574215.5_1_3:27203940-27332977:-|nuORF;nc|ENSG00000163491|Q6ZWH5-6|NEK10;nc|ENSG00000163491|Q6ZWH5-5|NEK10	ENSG00000163491|ENST00000691995|NEK10	ENSG00000163491|ENST00000691995|NEK10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.7636108398438	2	525.758746	1049.50294	-0.20941	-0.0001101	0.32921	0.00017309	0.1198	6.2987E-05	525.7590454209504	71.947	0.54148	71.907	71.705	72.246	-0.039497					24	19	2	0	0	0	0.64922	1	7027	7027		44.117	0	1	54745			17926	5806	12066	12075	20783	20783					-0.019831440359666885
ILSDDNFNL	9	Unmodified	_ILSDDNFNL_					0	0	0		ENSG00000163491|ENST00000691995|NEK10;nc|ENSG00000163491|Q6ZWH5|NEK10;nc|ENSG00000163491|Q6ZWH5-7|NEK10;ENST00000574215.5_1_3:27203940-27332977:-|nuORF;nc|ENSG00000163491|Q6ZWH5-6|NEK10;nc|ENSG00000163491|Q6ZWH5-5|NEK10	ENSG00000163491|ENST00000691995|NEK10	ENSG00000163491|ENST00000691995|NEK10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	525.758746	1049.50294	0.12656	6.6538E-05	-0.045959	-2.4163E-05	0.080597	4.2375E-05	525.7586500514719	71.947	0.51682	71.987	71.684	72.201	0.040222	0.03982	-0.00021358	NaN	44.117	27	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81514			17927	5806	12066	12075							-0.019831440359666885
ILSEALLIG	9	Unmodified	_ILSEALLIG_					0	0	0			REV__nc|ENSG00000020181|Q96PE1-2|ADGRA2	REV__nc|ENSG00000020181|Q96PE1-2|ADGRA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.791259765625	2	464.789318	927.564084	0.1718	7.9849E-05	2.8678	0.0013329	3.0395	0.0014127	464.7905115336865	34.402	1.3055	34.346	33.931	35.236	-0.055149					140	57	3	0	0	0	0.69914	1	1782	1782		40.573	8.6178	1	289420	+		17928	16234	12067	12076	20784	20784					0.0974041273415196
ILSERMHSL	9	Unmodified	_ILSERMHSL_					0	0	0		ENST00000379328.7_1_10:8096675-8096705:+|nuORF	ENST00000379328.7_1_10:8096675-8096705:+|nuORF	ENST00000379328.7_1_10:8096675-8096705:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2886962890625	2	543.292233	1084.56991	-0.80736	-0.00043863	-2.3436	-0.0012732	-3.1509	-0.0017119	543.2904156939707	74.873	0.74433	75.264	74.952	75.696	0.3911					40	17	3	0	0	0	0.38563	1	8449	8449		58.782	3.2778	1	585090			17929	10889	12068	12077	20785	20785					0.031011879741527082
ILSERMHSL	9	Unmodified	_ILSERMHSL_					0	0	0		ENST00000379328.7_1_10:8096675-8096705:+|nuORF	ENST00000379328.7_1_10:8096675-8096705:+|nuORF	ENST00000379328.7_1_10:8096675-8096705:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	543.292233	1084.56991	-0.31305	-0.00017008	-2.5666	-0.0013944	-2.8797	-0.0015645	543.2901431539757	74.736	0.61811	75.301	75.008	75.626	0.56458	0.018345	-0.00013503	NaN	58.782	37	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	649020			17930	10889	12068	12077							0.031011879741527082
ILSGELVIT	9	Unmodified	_ILSGELVIT_					0	0	0			REV__ENSG00000170456|ENST00000389082|DENND5B	REV__ENSG00000170456|ENST00000389082|DENND5B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.789306640625	2	472.786776	943.558998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.11	1	119.09	118.59	119.59	-0.024033								0	0	0	0.31472	1	13198	13198		25.45	3.4903	1		+		17931	21662	12069	12078	20786	20786					0.08496108871520391
ILSGLIYS	8	Unmodified	_ILSGLIYS_					0	0	0		ENST00000360000.8_1_X:102508919-102510024:-|nuORF	ENST00000360000.8_1_X:102508919-102510024:-|nuORF	ENST00000360000.8_1_X:102508919-102510024:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.2551574707031	2	433.255111	864.49567	-1.8302	-0.00079294	0.64395	0.000279	-1.1862	-0.00051394	433.25608407355435	107.16	1.1935	107.2	106.67	107.87	0.036118					137	28	6	0	0	0	0.9159	1	11450	11450		44.531	0	1	100650000			17932	10440	12070	12079	20787	20787					0.05800168154280527
ILSGPVVGGG	10	Unmodified	_ILSGPVVGGG_					0	0	0			REV__ENST00000461859.1_1_1:151535003-151537177:+|nuORF	REV__ENST00000461859.1_1_1:151535003-151537177:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2615966796875	2	428.25036	854.486168	-1.1377	-0.0004872	-4.2591	-0.001824	-5.3968	-0.0023112	428.2484143096238	91.071	0.94232	91.071	90.606	91.548	0					25	22	2	0	0	0	0.37624	1	8868	8868		38.806	10.924	1	219740	+		17933	27038	12071	12080	20788	20788					0.0531039986876749
ILSHHKCH	8	Unmodified	_ILSHHKCH_					0	0	0			REV__ENSG00000172478|ENST00000388934|MAB21L4	REV__ENSG00000172478|ENST00000388934|MAB21L4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.2691345214844	2	487.753079	973.491604	0.34427	0.00016792	0.1718	8.3796E-05	0.51607	0.00025172	487.7541047326056	29.174	0.37857	29.205	29.011	29.389	0.030947					22	13	2	0	0	0	0.4196	1	1428	1428		13.775	0	1	23595	+		17934	21836	12072	12081	20789	20789					0.003798001795757955
ILSKTKAIS	9	Unmodified	_ILSKTKAIS_					0	0	0		ENSG00000176198|ENST00000641082|OR11H4;nc|ENSG00000176198|Q8NGC9|OR11H4	ENSG00000176198|ENST00000641082|OR11H4	ENSG00000176198|ENST00000641082|OR11H4	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.4203796386719	2	480.808042	959.601532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.212	1	66.342	65.842	66.842	0.12996								0	0	0	0.3307	1	5865	5865		19.997	0.6368	1				17935	7062	12073	12082	20790	20790					0.12011503999769957
ILSLLARTT	9	Unmodified	_ILSLLARTT_					0	0	0			REV__ENST00000547268.1_1_12:108147850-108154343:-|nuORF	REV__ENST00000547268.1_1_12:108147850-108154343:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3009033203125	2	494.313492	986.612431	2.2886	0.0011313	3.6268	0.0017928	5.9154	0.0029241	494.3152473281919	97.431	0.88332	97.376	96.932	97.815	-0.055542					28	20	3	0	0	0	0.20789	1	10432	10432		30.504	17.544	1	361790	+		17936	28548	12074	12083	20791	20791					0.11858906374038725
ILSLLRSW	8	Unmodified	_ILSLLRSW_					0	0	0		ENST00000394790.2_1_10:75533209-75533281:+|nuORF	ENST00000394790.2_1_10:75533209-75533281:+|nuORF	ENST00000394790.2_1_10:75533209-75533281:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.30242919921875	2	494.302927	986.591301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.425	1	15.342	14.842	15.842	-0.083363								0	0	0	0.29344	1	39	39		31.955	1.4512	1				17937	11079	12075	12084	20792	20792					0.09746941065179726
ILSLNGQLM	9	Unmodified	_ILSLNGQLM_					0	0	0		nc|ENSG00000133401|O15018-2|PDZD2;ENSG00000133401|ENST00000438447|PDZD2;ENST00000502824.1_1_5:31799421-31843499:+|nuORF	nc|ENSG00000133401|O15018-2|PDZD2	nc|ENSG00000133401|O15018-2|PDZD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7799072265625	2	494.778428	987.542302	0.77019	0.00038107	2.7304	0.001351	3.5006	0.001732	494.77966004867045	84.042	2.7013	83.973	82.365	85.067	-0.069313					89	62	2	0	0	0	0.74721	1	8581	8581		37.159	2.9866	1	283830			17938	3876	12076	12085	20793	20793					0.048032847139324986
ILSMQLYTPSL	11	Unmodified	_ILSMQLYTPSL_					0	0	0			REV__ENST00000513079.5_1_5:73985169-73989478:+|nuORF	REV__ENST00000513079.5_1_5:73985169-73989478:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.3687744140625	2	633.344132	1264.67371	2.3333	0.0014778	-3.9077	-0.0024749	-1.5744	-0.00099712	633.3426645363675	98.084	0.16978	98.028	97.903	98.072	-0.055244					5	3	2	0	0	0	0.17431	1	10559	10559		18.262	0	1	34585	+		17939	27987	12077	12086	20794	20794					0.051960502911697404
ILSPGWPGY	9	Unmodified	_ILSPGWPGY_					0	0	0		nc|ENSG00000164796|Q7Z407-5|CSMD3;nc|ENSG00000164796|Q7Z407-3|CSMD3;nc|ENSG00000164796|Q7Z407-4|CSMD3;nc|ENSG00000164796|Q7Z407-2|CSMD3;ENSG00000164796|ENST00000297405|CSMD3	nc|ENSG00000164796|Q7Z407-5|CSMD3	nc|ENSG00000164796|Q7Z407-5|CSMD3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25994873046875	2	495.258185	988.501818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.497	1	35.744	35.244	36.244	0.24769								0	0	0	0.30678	1	2715	2715		42.474	3.2216	1				17940	6004	12078	12087	20795	20795					0.007106863857984536
ILSPNILVNQV	11	Unmodified	_ILSPNILVNQV_					0	0	0			REV__ENSG00000273841|ENST00000217893|TAF9	REV__ENSG00000273841|ENST00000217893|TAF9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.23272705078125	3	403.911568	1208.71287	0.59056	0.00023853	-1.8159	-0.00073346	-1.2253	-0.00049492	404.24657225998953	84.935	0.43346	85.084	84.734	85.167	0.14856					15	9	2	0	0	0	0.17504	1	8300	8300		7.0192	0.69828	1	35159	+		17941	23994	12079	12088	20796	20796					0.11686518637020527
ILSRPLQRPQ	10	Unmodified	_ILSRPLQRPQ_					0	0	0		ENST00000596769.1_1_19:53510963-53514048:+|nuORF	ENST00000596769.1_1_19:53510963-53514048:+|nuORF	ENST00000596769.1_1_19:53510963-53514048:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3676147460938	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.02	1	112.99	112.49	113.49	-0.024811								0	0	0	0.45132	1	12499	12499		15.642	4.1308	1				17942	14340	12080	12089	20797	20797					0.12459876308275852
ILSSIKVL	8	Unmodified	_ILSSIKVL_					0	0	0		ENSG00000167447|ENST00000300917|SMG8;nc|ENSG00000167447|Q8ND04-2|SMG8;nc|ENSG00000167447|Q8ND04-3|SMG8	ENSG00000167447|ENST00000300917|SMG8	ENSG00000167447|ENST00000300917|SMG8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.77471923828125	2	436.794404	871.574254	1.4188	0.0006197	-0.67116	-0.00029316	0.74759	0.00032654	436.79317070726256	90.965	0.59783	90.898	90.478	91.076	-0.067085					19	14	2	0	0	0	0.4196	1	9538	9538		20.482	0	1	121920			17943	6292	12081	12090	20798	20798					0.13333020459390355
ILSSLLLN	8	Unmodified	_ILSSLLLN_					0	0	0			REV__nc|ENSG00000158691|O43309-2|ZSCAN12	REV__nc|ENSG00000158691|O43309-2|ZSCAN12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7749328613281	2	436.776211	871.537869	-1.136	-0.00049617	-1.8731	-0.00081814	-3.0091	-0.0013143	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.86288	1	9009	9009		26.796	1.3459	1	8774400	+		17944	29960	12082	12091	20799	20799					0.09696143562678117
ILSSLLLN	8	Unmodified	_ILSSLLLN_					0	0	0			REV__nc|ENSG00000158691|O43309-2|ZSCAN12	REV__nc|ENSG00000158691|O43309-2|ZSCAN12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7745666503906	2	436.776211	871.537869	-0.16229	-7.0884E-05	-2.9337	-0.0012814	-3.096	-0.0013523	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.86288	2	9405	9405;9443		33.516	3.0119	1	15341000	+		17945	29960	12082	12091	20800;20801	20800					0.09696143562678117
ILSSLLLN	8	Unmodified	_ILSSLLLN_					0	0	0			REV__nc|ENSG00000158691|O43309-2|ZSCAN12	REV__nc|ENSG00000158691|O43309-2|ZSCAN12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77496337890625	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.80706	1	9199	9199		19.36	1.0356	1	13819000	+		17946	29960	12082	12091	20802	20802					0.09696143562678117
ILSSLLLN	8	Unmodified	_ILSSLLLN_					0	0	0			REV__nc|ENSG00000158691|O43309-2|ZSCAN12	REV__nc|ENSG00000158691|O43309-2|ZSCAN12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7747802734375	2	436.776211	871.537869	-1.8179	-0.00079401	-1.324	-0.00057831	-3.1419	-0.0013723	436.77554812926275	90.686	2.546	90.866	90.262	92.808	0.18029					181	60	4	0	0	0	0.86288	2	9162	9162;9187		26.796	7.4361	1	8965000	+		17947	29960	12082	12091	20803;20804	20803					0.09696143562678117
ILSSLLLN	8	Unmodified	_ILSSLLLN_					0	0	0			REV__nc|ENSG00000158691|O43309-2|ZSCAN12	REV__nc|ENSG00000158691|O43309-2|ZSCAN12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.7748107910156	2	436.776211	871.537869	-0.99178	-0.00043318	-2.1014	-0.00091785	-3.0932	-0.001351	436.7752083239027	90.559	2.3196	91.029	90.562	92.882	0.47068					153	55	5	0	0	0	0.86288	2	10854	10854;10933		37.159	9.2769	1	11924000	+		17948	29960	12082	12091	20805;20806	20805					0.09696143562678117
ILSTGLMLAL	10	Unmodified	_ILSTGLMLAL_					0	0	0			REV__ENSG00000141349|ENST00000269097|G6PC3	REV__ENSG00000141349|ENST00000269097|G6PC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.315185546875	2	516.312103	1030.60965	3.1012	0.0016012	0.56309	0.00029073	3.6643	0.0018919	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.86452	1	13108	13108		30.504	5.0535	1	1162600	+		17949	19675	12083	12092	20807	20807					0.09557314924859384
ILSTGLMLAL	10	Unmodified	_ILSTGLMLAL_					0	0	0			REV__ENSG00000141349|ENST00000269097|G6PC3	REV__ENSG00000141349|ENST00000269097|G6PC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3136596679688	2	516.312103	1030.60965	0.80556	0.00041592	2.4849	0.001283	3.2904	0.0016989	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.84112	2	10399	10399;10520		37.159	6.6555	1	72906000	+		17950	19675	12083	12092	20808;20809	20808					0.09557314924859384
ILSTGLMLAL	10	Unmodified	_ILSTGLMLAL_					0	0	0			REV__ENSG00000141349|ENST00000269097|G6PC3	REV__ENSG00000141349|ENST00000269097|G6PC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3148193359375	2	516.312103	1030.60965	1.9037	0.0009829	1.7854	0.00092181	3.6891	0.0019047	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.71042	1	11958	11958		44.117	7.67	1	22616000	+		17951	19675	12083	12092	20810	20810					0.09557314924859384
ILSTGLMLAL	10	Unmodified	_ILSTGLMLAL_					0	0	0			REV__ENSG00000141349|ENST00000269097|G6PC3	REV__ENSG00000141349|ENST00000269097|G6PC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3150634765625	2	516.312103	1030.60965	1.791	0.00092474	1.8914	0.00097654	3.6824	0.0019013	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.85934	1	12158	12158		35.618	7.364	1	24820000	+		17952	19675	12083	12092	20811	20811					0.09557314924859384
ILSTHSRTT	9	Unmodified	_ILSTHSRTT_					0	0	0		nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-5|EP400;ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91|EP400	nc|ENSG00000183495|Q96L91-4|EP400	nc|ENSG00000183495|Q96L91-4|EP400	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2798767089844	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.71772	1	8660	8660		39.253	4.1008	1	1261800			17953	7535	12084	12093	20812	20812					0.03911670812135526
ILSTHSRTT	9	Unmodified	_ILSTHSRTT_					0	0	0		nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-5|EP400;ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91|EP400	nc|ENSG00000183495|Q96L91-4|EP400	nc|ENSG00000183495|Q96L91-4|EP400	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.280029296875	2	508.28018	1014.54581	0.22565	0.0001147	-0.11322	-5.7546E-05	0.11244	5.715E-05	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.69624	2	9139	9139;9249		40.778	2.0246	1	1820400			17954	7535	12084	12093	20813;20814	20813					0.03911670812135526
ILSTHSRTT	9	Unmodified	_ILSTHSRTT_					0	0	0		nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-5|EP400;ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91|EP400	nc|ENSG00000183495|Q96L91-4|EP400	nc|ENSG00000183495|Q96L91-4|EP400	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.27972412109375	2	508.28018	1014.54581	-0.39653	-0.00020155	0.29161	0.00014822	-0.10492	-5.3328E-05	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.58668	2	8808	8784;8808		47.657	4.0065	1	2080300			17955	7535	12084	12093	20815;20816	20816					0.03911670812135526
ILSTHSRTT	9	Unmodified	_ILSTHSRTT_					0	0	0		nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-5|EP400;ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91|EP400	nc|ENSG00000183495|Q96L91-4|EP400	nc|ENSG00000183495|Q96L91-4|EP400	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2799377441406	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.76255	1	8805	8805		35.618	2.8059	1	1954800			17956	7535	12084	12093	20817	20817					0.03911670812135526
ILSTHSRTT	9	Unmodified	_ILSTHSRTT_					0	0	0		nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-5|EP400;ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91|EP400	nc|ENSG00000183495|Q96L91-4|EP400	nc|ENSG00000183495|Q96L91-4|EP400	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2796325683594	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.58668	1	8848	8848		47.657	8.4045	1	1814000			17957	7535	12084	12093	20818	20818					0.03911670812135526
ILSTNSFGP	9	Unmodified	_ILSTNSFGP_					0	0	0			REV__ENSG00000069248|ENST00000261396|NUP133	REV__ENSG00000069248|ENST00000261396|NUP133	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.243408203125	2	468.245275	934.475997	-0.76235	-0.00035697	0.76559	0.00035848	0.0032383	1.5163E-06	468.24549296496195	47.46	2.028	47.434	46.94	48.968	-0.026737					112	56	3	0	0	0	0.6204	1	4004	4004		45.972	3.5761	1	1887700	+		17958	16578	12085	12094	20819	20819					0.006137921435311
ILSTSARLQT	10	Unmodified	_ILSTSARLQT_					0	0	0		ENST00000357736.8_1_17:79877633-79877984:-|nuORF	ENST00000357736.8_1_17:79877633-79877984:-|nuORF	ENST00000357736.8_1_17:79877633-79877984:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3165283203125	2	545.316763	1088.61897	0.15103	8.2357E-05	-0.42604	-0.00023233	-0.27501	-0.00014997	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.81117	1	8699	8699		38.754	2.3069	1	5755000			17959	10393	12086	12095	20820	20820					0.07820799534761136
ILSVSFGYVY	10	Unmodified	_ILSVSFGYVY_					0	0	0			REV__ENSG00000150269|ENST00000279791|OR5M9	REV__ENSG00000150269|ENST00000279791|OR5M9	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.6207275390625	2	574.305332	1146.59611	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.505	1	70.543	70.043	71.043	0.038055								0	0	0	0.45132	1	6752	6752		38.806	3.6541	1		+		17960	20204	12087	12096	20821	20821					0.02867780417295762
ILSYLVSIIL	10	Unmodified	_ILSYLVSIIL_					0	0	0		ENST00000219400.7_1_16:81009893-81009938:-|nuORF	ENST00000219400.7_1_16:81009893-81009938:-|nuORF	ENST00000219400.7_1_16:81009893-81009938:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3629150390625	2	567.36265	1132.71075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.22	1	63.243	62.743	63.743	0.022984								0	0	0	0.45132	1	5529	5529		21.96	1.013	1				17961	9163	12088	12097	20822	20822					0.1497008989922506
ILSYSTSI	8	Unmodified	_ILSYSTSI_					0	0	0			REV__ENSG00000279301|ENST00000641193|OR2T11	REV__ENSG00000279301|ENST00000641193|OR2T11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.24090576171875	2	442.242201	882.469849	-0.15416	-6.8174E-05	-2.6265	-0.0011616	-2.7807	-0.0012297	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.884	1	8000	8000		33.516	0.70317	1	1068200	+		17962	24040	12089	12098	20823	20823					0.023912739120078186
ILTADLVIV	9	Unmodified	_ILTADLVIV_					0	0	0		ENSG00000069431|ENST00000261200|ABCC9	ENSG00000069431|ENST00000261200|ABCC9	ENSG00000069431|ENST00000261200|ABCC9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80615234375	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.7932	1	2465	2465		25.45	1.2474	1	336090			17963	1220	12090	12099	20824	20824					0.11580985768227947
ILTADLVIV	9	Unmodified	_ILTADLVIV_					0	0	0		ENSG00000069431|ENST00000261200|ABCC9	ENSG00000069431|ENST00000261200|ABCC9	ENSG00000069431|ENST00000261200|ABCC9	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8052062988281	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.651	1	42.651	42.151	43.151	0								0	0	0	0.2969	1	2972	2972		31.955	3.7006	1				17964	1220	12090	12099	20825	20825					0.11580985768227947
ILTADLVIV	9	Unmodified	_ILTADLVIV_					0	0	0		ENSG00000069431|ENST00000261200|ABCC9	ENSG00000069431|ENST00000261200|ABCC9	ENSG00000069431|ENST00000261200|ABCC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8059997558594	2	478.804968	955.595384	-1.2382	-0.00059286	1.4969	0.00071673	0.2587	0.00012387	478.80558529591235	40.624	1.0284	40.581	39.923	40.951	-0.042892					45	26	2	0	0	0	0.77546	1	2937	2937		31.955	2.8053	1	267990			17965	1220	12090	12099	20826	20826					0.11580985768227947
ILTADLVIV	9	Unmodified	_ILTADLVIV_					0	0	0		ENSG00000069431|ENST00000261200|ABCC9	ENSG00000069431|ENST00000261200|ABCC9	ENSG00000069431|ENST00000261200|ABCC9	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8048095703125	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.533	1	42.537	42.037	43.037	0.0043983								0	0	0	0.28386	1	2866	2866		37.159	5.2042	1				17966	1220	12090	12099	20827	20827					0.11580985768227947
ILTATLNKFV	10	Unmodified	_ILTATLNKFV_					0	0	0			REV__nc|ENSG00000102755|P17948-3|FLT1	REV__nc|ENSG00000102755|P17948-3|FLT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.33935546875	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.8651	1	12809	12809		25.574	2.5316	1	4071000	+		17967	17351	12091	12100	20828	20828					0.11535748579603933
ILTEGDLTL	9	Unmodified	_ILTEGDLTL_					0	0	0		nc|ENSG00000065923|Q96T83|SLC9A7;ENSG00000065923|ENST00000616978|SLC9A7	nc|ENSG00000065923|Q96T83|SLC9A7	nc|ENSG00000065923|Q96T83|SLC9A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.77264404296875	2	487.773865	973.533177	-0.70204	-0.00034244	0.82899	0.00040436	0.12695	6.1921E-05	487.7740978049072	87.881	0.86792	88.083	87.714	88.582	0.20114					44	20	3	0	0	0	0.19953	1	8696	8696		73.975	8.1716	1	834570			17968	1145	12092	12101	20829	20829					0.04535214629231632
ILTFIIALSN	10	Unmodified	_ILTFIIALSN_					0	0	0			REV__ENST00000485689.1_1_1:32682456-32683010:-|nuORF	REV__ENST00000485689.1_1_1:32682456-32683010:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.8336181640625	2	552.8368	1103.65905	-1.299	-0.00071813	-3.9295	-0.0021724	-5.2285	-0.0028905	552.8347210563574	83.7	2.6246	83.838	82.553	85.177	0.13811					95	60	2	0	0	0	0.70553	1	8082	8082		44.377	7.2181	1	186100	+		17969	20692	12093	12102	20830	20830					0.1113634620535322
ILTFLGLC	8	Unmodified	_ILTFLGLC_					0	0	0			REV__ENSG00000143624|ENST00000318967|INTS3	REV__ENSG00000143624|ENST00000318967|INTS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.25439453125	2	440.254057	878.493561	0.53539	0.00023571	2.2419	0.00098701	2.7773	0.0012227	440.254928206011	67.151	0.53613	67.179	66.911	67.447	0.02858					46	25	2	0	0	0	0.87276	1	6364	6364		29.842	4.3914	1	118370	+		17970	19828	12094	12103	20831	20831					0.04945416144835235
ILTGDRTGAGK	11	Unmodified	_ILTGDRTGAGK_					0	0	0			REV__nc|ENSG00000276850|P13928-3|ANXA8	REV__nc|ENSG00000276850|P13928-3|ANXA8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	544.8075561523438	2	544.806562	1087.59857	0.15928	8.6776E-05	-0.16821	-9.1643E-05	-0.0089324	-4.8664E-06	544.8063612053201	24.541	0.98756	24.642	24.281	25.269	0.10045					123	49	4	0	0	0	0.68532	1	871	871		33.922	3.418	1	1023100	+		17971	23956	12095	12104	20832	20832					0.058276288749766536
ILTIFGNLTI	10	Unmodified	_ILTIFGNLTI_					0	0	0		ENSG00000168131|ENST00000303324|OR2B2	ENSG00000168131|ENST00000303324|OR2B2	ENSG00000168131|ENST00000303324|OR2B2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8350830078125	2	552.8368	1103.65905	-0.71064	-0.00039287	-4.0102	-0.002217	-4.7209	-0.0026099	552.8343973070275	84.083	2.0319	84.083	83.586	85.618	0					122	47	3	0	0	0	0.86272	1	8054	8054		24.519	2.5593	1	300740			17972	6374	12096	12105	20833	20833					0.11136346205330483
ILTIFKEKQ	9	Unmodified	_ILTIFKEKQ_					0	0	0		nc|ENSG00000105695|P20916-3|MAG;ENSG00000105695|ENST00000392213|MAG;nc|ENSG00000105695|P20916-2|MAG	nc|ENSG00000105695|P20916-3|MAG	nc|ENSG00000105695|P20916-3|MAG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3406372070312	2	560.342249	1118.66995	-0.40673	-0.00022791	-3.2012	-0.0017938	-3.608	-0.0020217	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.74721	1	10747	10747		37.159	0.71236	1	60162000			17973	2242	12097	12106	20834	20834					0.11535748579603933
ILTIFKEKQ	9	Unmodified	_ILTIFKEKQ_					0	0	0		nc|ENSG00000105695|P20916-3|MAG;ENSG00000105695|ENST00000392213|MAG;nc|ENSG00000105695|P20916-2|MAG	nc|ENSG00000105695|P20916-3|MAG	nc|ENSG00000105695|P20916-3|MAG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.34033203125	2	560.342249	1118.66995	-1.1297	-0.00063301	-2.5217	-0.001413	-3.6514	-0.002046	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.78536	1	11335	11335		29.15	1.2673	1	84412000			17974	2242	12097	12106	20835	20835					0.11535748579603933
ILTIFKEKQ	9	Unmodified	_ILTIFKEKQ_					0	0	0		nc|ENSG00000105695|P20916-3|MAG;ENSG00000105695|ENST00000392213|MAG;nc|ENSG00000105695|P20916-2|MAG	nc|ENSG00000105695|P20916-3|MAG	nc|ENSG00000105695|P20916-3|MAG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3406982421875	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	1	12594	12594		23.042	1.0826	1	4071000			17975	2242	12097	12106	20836	20836					0.11535748579603933
ILTIKKNQNH	10	Unmodified	_ILTIKKNQNH_					0	0	0		L1M5_dup25852|chr8:27806947-27807562:-|1.0541310341095722|0.0589088323365446|4.16|63.0|9|2|sense	L1M5_dup25852|chr8:27806947-27807562:-|1.0541310341095722|0.0589088323365446|4.16|63.0|9|2|sense	L1M5_dup25852|chr8:27806947-27807562:-|1.0541310341095722|0.0589088323365446|4.16|63.0|9|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5749816894531	3	403.575178	1207.70371	-1.7546	-0.00070812	0.79854	0.00032227	-0.95608	-0.00038585	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.85981	1	8015	8015		35.152	1.2304	1	1090300			17976	14529	12098	12107	20837	20837					0.10816170071370834
ILTLLVDYTL	10	Unmodified	_ILTLLVDYTL_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000507771.5_1_17:48154781-48156326:+|nuORF;ENST00000505306.5_1_17:48154319-48165696:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.35595703125	2	582.34974	1162.68493	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.26	1	113.24	112.74	113.74	-0.024811								0	0	0	0.45132	1	12529	12529		21.96	1.013	1				17977	689	12099	12108	20838	20838					0.11009195656947668
ILTLLVDYTL	10	Unmodified	_ILTLLVDYTL_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000507771.5_1_17:48154781-48156326:+|nuORF;ENST00000505306.5_1_17:48154319-48165696:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.353515625	2	582.34974	1162.68493	2.7406	0.001596	4.1869	0.0024382	6.9275	0.0040342	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.85934	1	12592	12592		35.618	2.8059	1	7862700			17978	689	12099	12108	20839	20839					0.11009195656947668
ILTLSAPP	8	Unmodified	_ILTLSAPP_					0	0	0		nc|ENSG00000100150|O75140-5|DEPDC5;nc|ENSG00000100150|O75140-8|DEPDC5;nc|ENSG00000100150|O75140-4|DEPDC5;ENSG00000100150|ENST00000651528|DEPDC5;nc|ENSG00000100150|O75140-6|DEPDC5	nc|ENSG00000100150|O75140-5|DEPDC5	nc|ENSG00000100150|O75140-5|DEPDC5	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2483825683594	2	406.249829	810.485105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.24	1	116.17	115.67	116.67	-0.069672								0	0	0	0.29199	1	12481	12481		29.842	1.5873	1				17979	14808	12100	12109	20840	20840					0.07228185499843676
ILTLSFKGLAD	11	Unmodified	_ILTLSFKGLAD_					0	0	0			REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3	REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3428344726562	2	589.344989	1176.67542	-0.36759	-0.00021664	-3.0824	-0.0018166	-3.45	-0.0020332	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.70737	1	9415	9415		30.318	1.1477	1	11103000	+		17980	18198	12101	12110	20841	20841					0.09415427371436635
ILTLSFKGLAD	11	Unmodified	_ILTLSFKGLAD_					0	0	0			REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3	REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.342529296875	2	589.344989	1176.67542	-1.324	-0.0007803	-2.248	-0.0013248	-3.572	-0.0021051	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.7434	1	9471	9471		23.523	0.48021	1	17904000	+		17981	18198	12101	12110	20842	20842					0.09415427371436635
ILTLVERM	8	Unmodified	_ILTLVERM_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906494140625	2	487.788795	973.563038	-0.085708	-4.1808E-05	3.6076	0.0017597	3.5219	0.0017179	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.87922	1	8109	8109		31.955	2.1133	1	514950			17982	7581	12102	12111	20843	20843					0.0751987509358969
ILTLYNLG	8	Unmodified	_ILTLYNLG_					0	0	0		ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.7657470703125	2	453.768386	905.522219	-1.8474	-0.00083831	-4.0327	-0.0018299	-5.8802	-0.0026682	453.76663563247314	42.146	1.7379	42.146	41.766	43.504	0					90	42	4	0	0	0	0.92973	1	2923	2923		50.025	9.4519	1	323540			17983	8220	12103	12112	20844	20844					0.0656785704561571
ILTLYNLG	8	Unmodified	_ILTLYNLG_					0	0	0		ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7664794921875	2	453.768386	905.522219	-1.5185	-0.00068905	-3.2881	-0.001492	-4.8066	-0.0021811	453.766963530374	71.765	0.95408	72.149	71.628	72.582	0.38449					69	22	5	0	0	0	0.90465	1	8005	8005		40.573	1.7665	1	869760			17984	8220	12103	12112	20845	20845					0.0656785704561571
ILTPEALGL	9	Unmodified	_ILTPEALGL_					0	0	0		nc|ENSG00000117425|Q9Y6C5-2|PTCH2;ENSG00000117425|ENST00000372192|PTCH2	nc|ENSG00000117425|Q9Y6C5-2|PTCH2	nc|ENSG00000117425|Q9Y6C5-2|PTCH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7794494628906	2	463.781493	925.548434	-0.96623	-0.00044812	-3.7263	-0.0017282	-4.6925	-0.0021763	463.7798881427561	38.615	0.61809	38.956	38.697	39.316	0.34187					41	14	4	0	0	0	0.31972	2	3194	3183;3194		63.306	3.9099	1	2100000			17985	2978	12104	12113	20846;20847	20847					0.08268126217080862
ILTPEALGL	9	Unmodified	_ILTPEALGL_					0	0	0		nc|ENSG00000117425|Q9Y6C5-2|PTCH2;ENSG00000117425|ENST00000372192|PTCH2	nc|ENSG00000117425|Q9Y6C5-2|PTCH2	nc|ENSG00000117425|Q9Y6C5-2|PTCH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.779541015625	2	463.781493	925.548434	-0.87225	-0.00040453	-3.6133	-0.0016758	-4.4855	-0.0020803	463.7798455403882	38.467	1.081	38.99	38.633	39.714	0.52235					66	25	3	0	0	0	0.22631	2	3175	3175;3187		71.296	10.324	1	2514600			17986	2978	12104	12113	20848;20849	20848					0.08268126217080862
ILTPHIHPV	9	Unmodified	_ILTPHIHPV_					0	0	0		ENST00000468403.1_1_1:153751697-153752222:+|nuORF	ENST00000468403.1_1_1:153751697-153752222:+|nuORF	ENST00000468403.1_1_1:153751697-153752222:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8087158203125	2	513.808377	1025.6022	0.43039	0.00022114	0.99842	0.000513	1.4288	0.00073413	513.8087390054711	58.075	0.33004	58.185	57.956	58.286	0.11027					23	15	2	0	0	0	0.7932	1	4942	4942		26.796	2.5934	1	117030			17987	12177	12105	12114	20850	20850					0.0904234343945518
ILTPLVILLG	10	Unmodified	_ILTPLVILLG_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.361083984375	2	526.359911	1050.70527	0.23622	0.00012434	2.2547	0.0011868	2.4909	0.0013111	526.3609415708197	35.175	1.5308	35.281	34.617	36.148	0.10604					147	55	3	0	0	0	0.85939	1	1791	1791		23.042	0	1	1065400			17988	6807	12106	12115	20851	20851					0.1819441110740172
ILTPPVLKRP	10	Unmodified	_ILTPPVLKRP_					0	0	0			REV__ENST00000547221.1_3_6:31106167-31107440:+|nuORF	REV__ENST00000547221.1_3_6:31106167-31107440:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3609008789062	2	567.373884	1132.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.08	1	109.2	108.7	109.7	0.12289								0	0	0	0.45132	1	11753	11753		19.997	0.89325	1		+		17989	28547	12107	12116	20852	20852					0.17215734087517376
ILTQPWRL	8	Unmodified	_ILTQPWRL_					0	0	0		nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;nc|ENSG00000164944|Q69YN4-4|VIRMA	nc|ENSG00000164944|Q69YN4-2|VIRMA	nc|ENSG00000164944|Q69YN4-2|VIRMA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8088989257812	2	513.808377	1025.6022	-0.30203	-0.00015519	1.5478	0.00079525	1.2457	0.00064007	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.85277	1	4243	4243		25.45	0	1	861580			17990	6028	12108	12117	20853	20853					0.09042343439477918
ILTQVEIVARR	11	Unmodified	_ILTQVEIVARR_					0	0	0			REV__ENSG00000166170|ENST00000299204|BAG5	REV__ENSG00000166170|ENST00000299204|BAG5	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	649.4002685546875	2	649.401161	1296.78777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.488	1	86.488	85.988	86.988	0								0	0	0	0.56276	1	8243	8243		19.104	0	1		+		17991	21261	12109	12118	20854	20854					0.15124701168247157
ILTRAQKITKH	11	Unmodified	_ILTRAQKITKH_					0	0	0			REV__nc|ENSG00000153823|Q7Z2X4|PID1	REV__nc|ENSG00000153823|Q7Z2X4|PID1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2740173339844	3	436.941861	1307.80375	-0.34593	-0.00015115	-4.4492	-0.001944	-4.7951	-0.0020952	436.9397797202756	46.5	1.3452	46.421	46.006	47.352	-0.079006					113	38	4	0	0	0	0.74771	1	3414	3414		22.562	4.0305	1	942420	+		17992	29938	12110	12119	20855	20855					0.1621640740515886
ILTRLFRVFV	10	Unmodified	_ILTRLFRVFV_					0	0	0		ENSG00000142961|ENST00000319928|MOB3C	ENSG00000142961|ENST00000319928|MOB3C	ENSG00000142961|ENST00000319928|MOB3C	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	632.40185546875	2	632.400433	1262.78631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.026	1	16.085	15.585	16.585	0.059269								0	0	0	0.45132	1	102	102		14.137	1.3254	1				17993	4593	12111	12120	20856	20856					0.16543111870169014
ILTRVKPAAAR	11	Unmodified	_ILTRVKPAAAR_					0	0	0			REV__nc|ENSG00000136152|Q96JB2-2|COG3	REV__nc|ENSG00000136152|Q96JB2-2|COG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.3787841796875	2	598.385314	1194.75608	-2.4045	-0.0014388	-4.123	-0.0024671	-6.5275	-0.0039059	598.3827122218626	40.848	1.3552	40.855	40.235	41.59	0.0065727					86	35	3	0	0	0	0.76699	2	2935	2935;3007		18.262	2.6203	1	583190	+		17994	19289	12112	12121	20857;20858	20857					0.16648753204981404
ILTSCLITIL	10	Unmodified	_ILTSCLITIL_					0	0	0			REV__ENSG00000163964|ENST00000392391|PIGX	REV__ENSG00000163964|ENST00000392391|PIGX	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3169555664062	2	545.333036	1088.65152	-0.64297	-0.00035064	3.5626	0.0019428	2.9196	0.0015922	545.3352485135948	91.897	0.17545	91.897	91.804	91.979	0					6	3	2	0	0	0	0.37624	1	9006	9006		35.618	5.1146	1	21899	+		17995	21005	12113	12122	20859	20859					0.11073870613404324
ILTSVFFTWLI	11	Unmodified	_ILTSVFFTWLI_					0	0	0		ENST00000502980.1_1_3:98239917-98241743:-|nuORF	ENST00000502980.1_1_3:98239917-98241743:-|nuORF	ENST00000502980.1_1_3:98239917-98241743:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2729797363281	3	447.260197	1338.75876	-1.2906	-0.00057721	-1.3548	-0.00060597	-2.6454	-0.0011832	447.2585121314609	106.77	0.56819	106.92	106.6	107.17	0.14843					21	13	3	0	0	0	0.17375	1	11467	11467		30.569	12.736	1	177760			17996	12873	12114	12123	20860	20860					0.10293163819278561
ILTSVNHR	8	Unmodified	_ILTSVNHR_					0	0	0		ENSG00000126870|ENST00000407559|DYNC2I1	ENSG00000126870|ENST00000407559|DYNC2I1	ENSG00000126870|ENST00000407559|DYNC2I1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.271728515625	2	470.272158	938.529764	-0.95275	-0.00044805	0.77303	0.00036353	-0.17972	-8.4519E-05	470.2725133090264	92.093	2.8487	92.314	91.222	94.07	0.22157					155	67	4	0	0	0	0.8347	1	9271	9271		23.042	0	1	1872200			17997	3476	12115	12124	20861	20861					0.05804009365908769
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297119140625	2	567.32987	1132.64519	-0.51077	-0.00028978	0.47287	0.00026828	-0.037898	-2.1501E-05	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.65746	3	9180	9180;9204;9441		37.812	4.8343	1	11042000			17998	495	12116	12125	20862;20863;20864	20862					0.08417068706262398
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.32958984375	2	567.32987	1132.64519	-1.2008	-0.00068122	1.5929	0.00090372	0.39219	0.0002225	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.65746	2	9256	9138;9256		37.812	2.1932	1	5763000			17999	495	12116	12125	20865;20866	20866					0.08417068706262398
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.329833984375	2	567.32987	1132.64519	-1.2006	-0.00068114	1.0133	0.00057488	-0.1873	-0.00010626	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.7434	1	9609	9609		23.523	0	1	15673000			18000	495	12116	12125	20867	20867					0.08417068706262398
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3297119140625	2	567.32987	1132.64519	1.5887	0.00090129	-1.4838	-0.00084182	0.10482	5.9468E-05	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.51007	1	9389	9389		51.193	10.415	1	5459400			18001	495	12116	12125	20868	20868					0.08417068706262398
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.32958984375	2	567.32987	1132.64519	1.8589	0.0010546	-2.0003	-0.0011348	-0.14134	-8.0184E-05	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.65746	3	9910	9742;9838;9910		37.812	7.3079	1	15439000			18002	495	12116	12125	20869;20870;20871	20871					0.08417068706262398
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3300170898438	2	567.32987	1132.64519	1.492	0.00084643	-1.3496	-0.00076566	0.14237	8.0771E-05	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.70737	1	9229	9229		30.318	1.1682	1	5346500			18003	495	12116	12125	20872	20872					0.08417068706262398
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.329345703125	2	567.32987	1132.64519	1.497	0.00084932	-1.6772	-0.00095153	-0.18017	-0.00010222	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.64498	4	9923	9587;9635;9732;9923		39.253	3.6345	1	15259000			18004	495	12116	12125	20873;20874;20875;20876	20876					0.08417068706262398
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3297729492188	2	567.32987	1132.64519	0.4851	0.00027521	-0.68315	-0.00038757	-0.19806	-0.00011236	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.62614	3	9497	9304;9497;9799		41.427	7.2541	1	18558000			18005	495	12116	12125	20877;20878;20879	20878					0.08417068706262398
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3297729492188	2	567.32987	1132.64519	0.77491	0.00043963	-0.4618	-0.00026199	0.31311	0.00017764	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.68532	1	8996	8996		33.922	2.3918	1	6344600			18006	495	12116	12125	20880	20880					0.08417068706262398
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.32958984375	2	567.32987	1132.64519	0.79571	0.00045143	-1.0349	-0.00058711	-0.23916	-0.00013568	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.67778	2	9452	9415;9452		35.152	8.4591	1	18145000			18007	495	12116	12125	20881;20882	20882					0.08417068706262398
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.330078125	2	567.32987	1132.64519	-1.3957	-0.00079181	1.2535	0.00071113	-0.14221	-8.0679E-05	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.70737	3	9249	9249;9358;9418		30.318	1.1682	1	17338000			18008	495	12116	12125	20883;20884;20885	20883					0.08417068706262398
ILTSVSSLRGT	11	Unmodified	_ILTSVSSLRGT_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000498186.5_1_7:148514900-148581332:-|nuORF	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.330078125	2	567.32987	1132.64519	0.27026	0.00015333	-0.062557	-3.5491E-05	0.2077	0.00011784	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.70737	1	10977	10977		30.318	2.4355	1	6007000			18009	495	12116	12125	20886	20886					0.08417068706262398
ILTTAVLAE	9	Unmodified	_ILTTAVLAE_					0	0	0		ENSG00000185905|ENST00000329410|C16orf54	ENSG00000185905|ENST00000329410|C16orf54	ENSG00000185905|ENST00000329410|C16orf54	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77734375	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.342	1	80.479	79.979	80.979	0.13702								0	0	0	0.32159	1	7645	7645		23.042	0.46283	1				18010	7754	12117	12126	20887	20887					0.07575822354476713
ILTTTTKEER	10	Unmodified	_ILTTTTKEER_					0	0	0			REV__nc|ENSG00000103549|O75150-3|RNF40	REV__nc|ENSG00000103549|O75150-3|RNF40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.3323364257812	2	596.33261	1190.65067	0.92114	0.00054931	-0.45114	-0.00026903	0.47	0.00028028	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.8608	1	9822	9822		34.173	1.3601	1	1402200	+		18011	17422	12118	12127	20888	20888					0.06296747498049626
ILTVLFLTLT	10	Unmodified	_ILTVLFLTLT_					0	0	0		ENST00000487558.1_1_2:225360464-225362517:-|nuORF	ENST00000487558.1_1_2:225360464-225362517:-|nuORF	ENST00000487558.1_1_2:225360464-225362517:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3640747070312	2	567.36265	1132.71075	0.39672	0.00022508	1.2522	0.00071043	1.6489	0.00093552	567.363221347754	44.24	2.8558	44.249	42.808	45.664	0.0084534					165	70	4	0	0	0	0.8651	1	3208	3208		25.574	0.12388	1	1167000			18012	12603	12119	12128	20889	20889					0.1497008989922506
ILVACLRLRP	10	Unmodified	_ILVACLRLRP_					0	0	0			REV__ENST00000545682.5_1_11:67232087-67232680:-|nuORF	REV__ENST00000545682.5_1_11:67232087-67232680:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.3663330078125	2	577.365536	1152.71652	3.0575	0.0017653	-1.5308	-0.00088381	1.5268	0.0008815	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.8488	3	11224	11224;11236;11273		24.203	6.8378	1	11111000	+		18013	28527	12120	12129	20890;20891;20892	20890					0.14626909929870635
ILVACLRLRP	10	Unmodified	_ILVACLRLRP_					0	0	0			REV__ENST00000545682.5_1_11:67232087-67232680:-|nuORF	REV__ENST00000545682.5_1_11:67232087-67232680:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	577.3663940429688	2	577.365536	1152.71652	0.74115	0.00042792	0.81724	0.00047185	1.5584	0.00089976	577.3658570064985	102.18	2.9839	102.23	101.81	104.79	0.043198					214	72	5	0	0	0	0.86201	5	11049	11049;11073;11097;11134;11170		31.955	6.8378	1	10154000	+		18014	28527	12120	12129	20893;20894;20895;20896;20897	20893					0.14626909929870635
ILVACLRLRP	10	Unmodified	_ILVACLRLRP_					0	0	0			REV__ENST00000545682.5_1_11:67232087-67232680:-|nuORF	REV__ENST00000545682.5_1_11:67232087-67232680:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3661499023438	2	577.365536	1152.71652	0.64819	0.00037424	0.9102	0.00052552	1.5584	0.00089976	577.3659582171192	102.04	3.0704	102.23	101.84	104.91	0.19484					206	76	5	0	0	0	0.85939	2	10694	10694;10825		31.955	8.9124	1	17266000	+		18015	28527	12120	12129	20898;20899	20898					0.14626909929870635
ILVACLRLRP	10	Unmodified	_ILVACLRLRP_					0	0	0			REV__ENST00000545682.5_1_11:67232087-67232680:-|nuORF	REV__ENST00000545682.5_1_11:67232087-67232680:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	577.3663940429688	2	577.365536	1152.71652	0.87834	0.00050713	0.68637	0.00039629	1.5647	0.00090341	577.3658132315567	102.16	3.1638	102.3	101.85	105.01	0.13522					236	78	5	0	0	0	0.85694	5	10716	10705;10716;10739;10799;10861		31.955	6.3808	1	15036000	+		18016	28527	12120	12129	20900;20901;20902;20903;20904	20901					0.14626909929870635
ILVACLRLRP	10	Unmodified	_ILVACLRLRP_					0	0	0			REV__ENST00000545682.5_1_11:67232087-67232680:-|nuORF	REV__ENST00000545682.5_1_11:67232087-67232680:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.36669921875	2	577.365536	1152.71652	2.1382	0.0012346	0.012931	7.4658E-06	2.1512	0.001242	577.3654203694961	102.01	1.0705	102.33	101.93	103.01	0.32511					73	24	4	0	0	0	0.86201	1	12420	12420		24.203	0	1	1980600	+		18017	28527	12120	12129	20905	20905					0.14626909929870635
ILVADSLSL	9	Unmodified	_ILVADSLSL_					0	0	0		nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41;ENSG00000006715|ENST00000310301|VPS41	nc|ENSG00000006715|P49754-2|VPS41	nc|ENSG00000006715|P49754-2|VPS41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.77734375	2	465.778951	929.543348	-0.11871	-5.5291E-05	-2.8407	-0.0013231	-2.9594	-0.0013784	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.77546	1	8094	8094		31.955	1.4512	1	1083800			18018	711	12121	12130	20906	20906					0.07575822354476713
ILVAGDRR	8	Unmodified	_ILVAGDRR_					0	0	0		nc|ENSG00000109790|Q96PQ7-5|KLHL5;ENSG00000109790|ENST00000504108|KLHL5;nc|ENSG00000109790|Q96PQ7|KLHL5;nc|ENSG00000109790|Q96PQ7-2|KLHL5;nc|ENSG00000109790|Q96PQ7-3|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2742614746094	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.86288	1	9222	9222		26.796	0	1	26247000			18019	2485	12122	12131	20907	20907					0.08152313228515595
ILVAGDRR	8	Unmodified	_ILVAGDRR_					0	0	0		nc|ENSG00000109790|Q96PQ7-5|KLHL5;ENSG00000109790|ENST00000504108|KLHL5;nc|ENSG00000109790|Q96PQ7|KLHL5;nc|ENSG00000109790|Q96PQ7-2|KLHL5;nc|ENSG00000109790|Q96PQ7-3|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27435302734375	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.85277	1	9869	9869		25.45	2.4077	1	47650000			18020	2485	12122	12131	20908	20908					0.08152313228515595
ILVAGDRR	8	Unmodified	_ILVAGDRR_					0	0	0		nc|ENSG00000109790|Q96PQ7-5|KLHL5;ENSG00000109790|ENST00000504108|KLHL5;nc|ENSG00000109790|Q96PQ7|KLHL5;nc|ENSG00000109790|Q96PQ7-2|KLHL5;nc|ENSG00000109790|Q96PQ7-3|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2745361328125	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.86791	1	9989	9989		28.254	0	1	51820000			18021	2485	12122	12131	20909	20909					0.08152313228515595
ILVAGDRR	8	Unmodified	_ILVAGDRR_					0	0	0		nc|ENSG00000109790|Q96PQ7-5|KLHL5;ENSG00000109790|ENST00000504108|KLHL5;nc|ENSG00000109790|Q96PQ7|KLHL5;nc|ENSG00000109790|Q96PQ7-2|KLHL5;nc|ENSG00000109790|Q96PQ7-3|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.274658203125	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.86791	1	10052	10052		28.254	5.2118	1	51698000			18022	2485	12122	12131	20910	20910					0.08152313228515595
ILVAGDRR	8	Unmodified	_ILVAGDRR_					0	0	0		nc|ENSG00000109790|Q96PQ7-5|KLHL5;ENSG00000109790|ENST00000504108|KLHL5;nc|ENSG00000109790|Q96PQ7|KLHL5;nc|ENSG00000109790|Q96PQ7-2|KLHL5;nc|ENSG00000109790|Q96PQ7-3|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2745666503906	2	450.274701	898.534849	0.70497	0.00031743	-0.5445	-0.00024518	0.16047	7.2255E-05	450.274392035395	95.119	1.9705	95.282	94.908	96.878	0.16307					118	46	3	0	0	0	0.89457	1	9754	9754		37.028	3.5129	1	967700			18023	2485	12122	12131	20911	20911					0.08152313228515595
ILVAIVTNVC	10	Unmodified	_ILVAIVTNVC_					0	0	0			REV__nc|ENSG00000065000|O14617-4|AP3D1	REV__nc|ENSG00000065000|O14617-4|AP3D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	522.8114624023438	2	522.809728	1043.6049	0.78513	0.00041047	2.2967	0.0012007	3.0818	0.0016112	522.8110201119222	96.303	2.5891	96.467	95.474	98.063	0.16316					69	60	2	0	0	0	0.86218	1	9923	9923		32.812	2.3088	1	402470	+		18024	16489	12123	12132	20912	20912					0.0848443078211858
ILVASAVLP	9	Unmodified	_ILVASAVLP_					0	0	0			REV__ENST00000489643.6_1_9:34649384-34650059:+|nuORF	REV__ENST00000489643.6_1_9:34649384-34650059:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.7449035644531	2	441.786579	881.558604	-0.15425	-6.8148E-05	4.1162	0.0018185	3.9619	0.0017503	441.7882483013738	89.795	0.47953	89.864	89.428	89.907	0.068695					14	10	2	0	0	0	0.20789	1	9162	9162		25.45	1.2474	1	21310	+		18025	27623	12124	12133	20913	20913					0.11308733942325944
ILVASAVLP	9	Unmodified	_ILVASAVLP_					0	0	0			REV__ENST00000489643.6_1_9:34649384-34650059:+|nuORF	REV__ENST00000489643.6_1_9:34649384-34650059:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	441.786579	881.558604	0.6448	0.00028486	0.95186	0.00042052	1.5967	0.00070538	441.78654902196456	89.894	0.12918	90.046	89.959	90.088	0.1519	0.091029	-0.0018069	NaN	33.516	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8773.7	+		18026	27623	12124	12133							0.11308733942325944
ILVAVAVPRWT	11	Unmodified	_ILVAVAVPRWT_					0	0	0			REV__ENST00000469092.5_1_17:72701353-72708973:-|nuORF	REV__ENST00000469092.5_1_17:72701353-72708973:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.8796997070312	2	612.876791	1223.73903	0.28934	0.00017733	4.2626	0.0026125	4.5519	0.0027898	612.8792234651027	104.57	3.8669	104.61	104	107.87	0.039864					305	91	6	0	0	0	0.64498	1	11411	11411		39.253	5.0803	1	50996000	+		18027	27193	12125	12134	20914	20914					0.13610832599169953
ILVAVAVPRWT	11	Unmodified	_ILVAVAVPRWT_					0	0	0			REV__ENST00000469092.5_1_17:72701353-72708973:-|nuORF	REV__ENST00000469092.5_1_17:72701353-72708973:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8792724609375	2	612.876791	1223.73903	0.91302	0.00055957	3.4829	0.0021346	4.3959	0.0026941	612.8787003590065	104.47	3.5452	104.58	103.94	107.49	0.11684					293	87	6	0	0	0	0.69995	1	11104	11104		31.53	2.3598	1	81912000	+		18028	27193	12125	12134	20915	20915					0.13610832599169953
ILVCAPGRLL	10	Unmodified	_ILVCAPGRLL_					0	0	0		ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3275756835938	2	527.825712	1053.63687	-0.15247	-8.048E-05	2.2594	0.0011925	2.1069	0.0011121	528.3278355072924	49.458	1.7423	49.365	48.44	50.182	-0.093178					58	41	2	0	0	0	0.86201	1	3866	3866		24.203	2.2429	1	267510			18029	11415	12126	12135	20916	20916					0.11219843255912565
ILVCAPGRLL	10	Unmodified	_ILVCAPGRLL_					0	0	0		ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	527.825712	1053.63687	-1.3445	-0.00070964	3.9487	0.0020842	2.6043	0.0013746	528.3285495693599	49.673	1.596	49.673	49.354	50.95	0	0.22553	0.0016023	NaN	24.203	52	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	169540			18030	11415	12126	12135							0.11219843255912565
ILVCAPGRLL	10	Unmodified	_ILVCAPGRLL_					0	0	0		ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	527.825712	1053.63687	0.11365	5.9986E-05	2.0589	0.0010867	2.1725	0.0011467	528.3277561949346	49.333	2.0218	49.329	48.783	50.805	-0.0030327	-0.11841	-0.00039267	NaN	24.203	70	50	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	221720			18031	11415	12126	12135							0.11219843255912565
ILVCAPGRLL	10	Unmodified	_ILVCAPGRLL_					0	0	0		ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	527.825712	1053.63687	-0.22204	-0.0001172	2.483	0.0013106	2.2609	0.0011934	528.3279216404179	49.355	1.975	49.331	48.794	50.769	-0.024033	-0.11721	5.5021E-05	NaN	24.203	62	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178350			18032	11415	12126	12135							0.11219843255912565
ILVCAPGRLL	10	Unmodified	_ILVCAPGRLL_					0	0	0		ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	527.825712	1053.63687	-0.17743	-9.365E-05	2.2524	0.0011889	2.075	0.0010952	528.3278457140423	49.295	1.717	49.321	48.497	50.214	0.025574	-0.12692	-0.00018835	NaN	24.203	67	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	247120			18033	11415	12126	12135							0.11219843255912565
ILVCAPGRLL	10	Unmodified	_ILVCAPGRLL_					0	0	0		ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	527.825712	1053.63687	0.36965	0.00019511	2.1945	0.0011583	2.5641	0.0013534	528.3276975668517	49.626	2.3316	49.668	48.638	50.969	0.042236	0.21996	-0.00024954	NaN	24.203	87	63	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	267300			18034	11415	12126	12135							0.11219843255912565
ILVDGQPRQAK	11	Unmodified	_ILVDGQPRQAK_					0	0	0		nc|ENSG00000140538|Q16288-5|NTRK3;nc|ENSG00000140538|Q16288-3|NTRK3;nc|ENSG00000140538|Q16288-4|NTRK3;ENSG00000140538|ENST00000629765|NTRK3	nc|ENSG00000140538|Q16288-5|NTRK3	nc|ENSG00000140538|Q16288-5|NTRK3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.879638671875	2	612.856586	1223.69862	-1.2476	-0.00076462	-4.3661	-0.0026758	-5.6137	-0.0034404	612.8534468060077	104.63	0.23774	104.73	104.67	104.91	0.093857					8	5	2	0	0	0	0.17551	1	11061	11061		45.972	1.5951	1	313450			18035	4444	12127	12136	20917	20917					0.09571866208739266
ILVDHLKH	8	Unmodified	_ILVDHLKH_					0	0	0			REV__nc|ENSG00000003509|Q7L592-2|NDUFAF7	REV__nc|ENSG00000003509|Q7L592-2|NDUFAF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.790771484375	2	487.792727	973.5709	-1.4525	-0.00070854	-3.1625	-0.0015427	-4.6151	-0.0022512	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.86791	1	7831	7831		28.254	2.8041	1	503530	+		18036	16053	12128	12137	20918	20918					0.0830577040536582
ILVDLGPLA	9	Unmodified	_ILVDLGPLA_					0	0	0			REV__nc|ENSG00000087269|P78316-2|NOP14	REV__nc|ENSG00000087269|P78316-2|NOP14	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30108642578125	2	455.784036	909.553519	-1.8164	-0.00082788	3.166	0.001443	1.3496	0.00061515	455.785318563311	43.535	2.2148	43.535	42.918	45.133	0					85	53	2	0	0	0	0.20789	1	3280	3280		38.806	6.8513	1	247130	+		18037	16930	12129	12138	20919	20919					0.09512430079689693
ILVDNLTPPII	11	Unmodified	_ILVDNLTPPII_					0	0	0			REV__ENSG00000146399|ENST00000275216|TAAR1	REV__ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3665161132812	2	604.368464	1206.72238	-0.48563	-0.0002935	-2.8288	-0.0017096	-3.3144	-0.0020031	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.68378	1	11609	11609		34.173	1.3601	1	63350000	+		18038	20012	12130	12139	20920	20920					0.12728286922560983
ILVDNLTPPII	11	Unmodified	_ILVDNLTPPII_					0	0	0			REV__ENSG00000146399|ENST00000275216|TAAR1	REV__ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.366455078125	2	604.368464	1206.72238	-0.11879	-7.1791E-05	-3.1394	-0.0018974	-3.2582	-0.0019692	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.66929	1	11588	11588		36.447	1.2947	1	64334000	+		18039	20012	12130	12139	20921	20921					0.12728286922560983
ILVELRTM	8	Unmodified	_ILVELRTM_					0	0	0		ENST00000478660.6_1_6:45481365-45631456:+|nuORF	ENST00000478660.6_1_6:45481365-45631456:+|nuORF	ENST00000478660.6_1_6:45481365-45631456:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.790771484375	2	487.788795	973.563038	0.84663	0.00041298	2.8765	0.0014031	3.7232	0.0018161	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.86288	2	8531	8531;8821		40.573	8.6178	1	2238600			18040	12397	12131	12140	20922;20923	20922					0.07519875093601058
ILVELRTM	8	Unmodified	_ILVELRTM_					0	0	0		ENST00000478660.6_1_6:45481365-45631456:+|nuORF	ENST00000478660.6_1_6:45481365-45631456:+|nuORF	ENST00000478660.6_1_6:45481365-45631456:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7905578613281	2	487.788795	973.563038	-0.70733	-0.00034503	4.3989	0.0021457	3.6915	0.0018007	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.884	1	8189	8189		33.516	1.5607	1	2348200			18041	12397	12131	12140	20924	20924					0.07519875093601058
ILVELRTM	8	Unmodified	_ILVELRTM_					0	0	0		ENST00000478660.6_1_6:45481365-45631456:+|nuORF	ENST00000478660.6_1_6:45481365-45631456:+|nuORF	ENST00000478660.6_1_6:45481365-45631456:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.79010009765625	2	487.788795	973.563038	-0.48923	-0.00023864	4.277	0.0020863	3.7878	0.0018476	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.89962	3	9892	9771;9806;9892		47.916	9.1095	1	1599600			18042	12397	12131	12140	20925;20926;20927	20927					0.07519875093601058
ILVELRTM	8	Unmodified	_ILVELRTM_					0	0	0		ENST00000478660.6_1_6:45481365-45631456:+|nuORF	ENST00000478660.6_1_6:45481365-45631456:+|nuORF	ENST00000478660.6_1_6:45481365-45631456:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.79034423828125	2	487.788795	973.563038	-0.24073	-0.00011743	4.0932	0.0019966	3.8524	0.0018792	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.89494	1	9913	9913		37.159	5.2042	1	1981400			18043	12397	12131	12140	20928	20928					0.07519875093601058
ILVFVLYFVQV	11	Unmodified	_ILVFVLYFVQV_					0	0	0		ENST00000577368.5_1_17:61512979-61514908:-|nuORF	ENST00000577368.5_1_17:61512979-61514908:-|nuORF	ENST00000577368.5_1_17:61512979-61514908:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.2727966308594	3	447.272325	1338.79515	-1.7854	-0.00079855	3.0485	0.0013635	1.2631	0.00056494	447.27362843006824	106.96	1.1721	107.02	106.47	107.64	0.053757					124	27	6	0	0	0	0.732	1	11421	11421		26.063	8.8966	1	15545000			18044	14066	12132	12141	20929	20929					0.13930040715968062
ILVGGLGLAM	10	Unmodified	_ILVGGLGLAM_					0	0	0		ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;nc|ENSG00000125675|P42263|GRIA3;ENSG00000125675|ENST00000620443|GRIA3	ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000125675|P42263|GRIA3	ENSG00000152578|ENST00000282499|GRIA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2879333496094	2	472.285889	942.557224	-0.026744	-1.2631E-05	3.8174	0.0018029	3.7907	0.0017903	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.70264	1	10472	10472		44.531	9.3304	1	48574000			18045	5184;14873;3404	12133	12142	20930	20930					0.08364776581913702
ILVGGLGLAM	10	Unmodified	_ILVGGLGLAM_					0	0	0		ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;nc|ENSG00000125675|P42263|GRIA3;ENSG00000125675|ENST00000620443|GRIA3	ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000125675|P42263|GRIA3	ENSG00000152578|ENST00000282499|GRIA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2860412597656	2	472.285889	942.557224	0.77515	0.00036609	4.1826	0.0019754	4.9578	0.0023415	472.2880406443957	100.91	1.1997	101.05	100.29	101.49	0.14352					49	28	2	0	0	0	0.85976	1	10569	10569		35.201	2.3883	1	230310			18046	5184;14873;3404	12133	12142	20931	20931					0.08364776581913702
ILVGGLGLAM	10	Unmodified	_ILVGGLGLAM_					0	0	0		ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;nc|ENSG00000125675|P42263|GRIA3;ENSG00000125675|ENST00000620443|GRIA3	ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000125675|P42263|GRIA3	ENSG00000152578|ENST00000282499|GRIA4	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	472.285889	942.557224	-0.89141	-0.000421	6.0445	0.0028547	5.1531	0.0024337	472.28875647629087	101.26	0.93186	101.26	100.64	101.57	0	0.18186	0.00057239	NaN	35.201	40	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	155660			18047	5184;14873;3404	12133	12142							0.08364776581913702
ILVGGLGLAM	10	Unmodified	_ILVGGLGLAM_					0	0	0		ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;nc|ENSG00000125675|P42263|GRIA3;ENSG00000125675|ENST00000620443|GRIA3	ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000125675|P42263|GRIA3	ENSG00000152578|ENST00000282499|GRIA4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	472.285889	942.557224	-0.10765	-5.0843E-05	5.2893	0.0024981	5.1817	0.0024472	472.2885526809991	101.14	0.8251	101.17	100.79	101.62	0.031036	0.089583	-0.00014093	NaN	35.201	34	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171390			18048	5184;14873;3404	12133	12142							0.08364776581913702
ILVGGLGLAM	10	Unmodified	_ILVGGLGLAM_					0	0	0		ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;nc|ENSG00000125675|P42263|GRIA3;ENSG00000125675|ENST00000620443|GRIA3	ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000125675|P42263|GRIA3	ENSG00000152578|ENST00000282499|GRIA4	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	472.285889	942.557224	2.6574	0.0012551	2.6292	0.0012417	5.2866	0.0024968	472.2874126240724	101.11	0.90861	101.06	100.58	101.49	-0.052116	-0.024872	-0.0026536	NaN	35.201	38	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	193790			18049	5184;14873;3404	12133	12142							0.08364776581913702
ILVGGLGLAM	10	Unmodified	_ILVGGLGLAM_					0	0	0		ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;nc|ENSG00000125675|P42263|GRIA3;ENSG00000125675|ENST00000620443|GRIA3	ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000125675|P42263|GRIA3	ENSG00000152578|ENST00000282499|GRIA4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	472.285889	942.557224	-0.022257	-1.0512E-05	5.3234	0.0025142	5.3011	0.0025037	472.2885842857259	100.92	0.87321	100.96	100.43	101.3	0.046356	-0.11751	-0.00010876	NaN	35.201	37	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186700			18050	5184;14873;3404	12133	12142							0.08364776581913702
ILVGGLVDL	9	Unmodified	_ILVGGLVDL_					0	0	0			REV__nc|ENSG00000163082|Q8IWX5-2|SGPP2	REV__nc|ENSG00000163082|Q8IWX5-2|SGPP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7549133300781	2	449.784036	897.553519	0.56824	0.00025558	1.0725	0.00048239	1.6407	0.00073797	449.7850669687132	80.269	0.097961	80.41	80.359	80.457	0.14118					5	3	2	0	0	0	0.20789	1	7644	7644		19.36	11.129	1	20040	+		18051	20879	12134	12143	20932	20932					0.10064430079705744
ILVGVLALN	9	Unmodified	_ILVGVLALN_					0	0	0			REV__ENST00000236693.11_1_2:3651915-3673629:+|nuORF	REV__ENST00000236693.11_1_2:3651915-3673629:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79022216796875	2	456.299853	910.585153	0.16474	7.5171E-05	1.5618	0.00071265	1.7266	0.00078782	456.30036731489264	39.823	1.8484	39.793	38.985	40.834	-0.030273					102	47	4	0	0	0	0.20789	1	2890	2890		38.806	5.2906	1	447120	+		18052	18288	12135	12144	20933	20933					0.12628422833643071
ILVGVLALN	9	Unmodified	_ILVGVLALN_					0	0	0			REV__ENST00000236693.11_1_2:3651915-3673629:+|nuORF	REV__ENST00000236693.11_1_2:3651915-3673629:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30133056640625	2	456.299853	910.585153	0.11124	5.0758E-05	2.4046	0.0010972	2.5159	0.001148	456.3008660757633	48.327	3.035	48.325	47.755	50.79	-0.002449					136	76	2	0	0	0	0.69914	1	4020	4020		40.573	4.9543	1	254750	+		18053	18288	12135	12144	20934	20934					0.12628422833643071
ILVHASLRL	9	Unmodified	_ILVHASLRL_					0	0	0		ENSG00000243279|ENST00000553851|PRAF2	ENSG00000243279|ENST00000553851|PRAF2	ENSG00000243279|ENST00000553851|PRAF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.327392578125	2	511.329476	1020.6444	-1.5781	-0.00080692	-3.0137	-0.001541	-4.5918	-0.0023479	511.3278411382384	97.118	1.95	97.32	96.964	98.914	0.20206					112	44	4	0	0	0	0.77546	1	9976	9976		31.955	1.4512	1	1123400			18054	8806	12136	12145	20935	20935					0.13490318847846083
ILVHGMGL	8	Unmodified	_ILVHGMGL_					0	0	0			REV__ENSG00000138459|ENST00000492406|SLC35A5	REV__ENSG00000138459|ENST00000492406|SLC35A5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22613525390625	2	420.244024	838.473494	0.57389	0.00024118	3.1002	0.0013029	3.6741	0.001544	420.24563223974354	82.799	1.7958	82.946	82.289	84.085	0.14694					77	41	3	0	0	0	0.4196	1	7904	7904		24.504	14.319	1	144330	+		18055	19475	12137	12146	20936	20936					0.04779665204887351
ILVHKNQAS	9	Unmodified	_ILVHKNQAS_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1;ENST00000548216.2_1_16:15724122-15728701:-|nuORF	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.29364013671875	2	505.293091	1008.57163	-0.42525	-0.00021488	-2.8055	-0.0014176	-3.2308	-0.0016325	505.29158900828264	97.072	2.1897	97.303	96.825	99.015	0.23103					138	50	4	0	0	0	0.7932	1	10118	10118		26.693	3.6504	1	1851600			18056	6228	12138	12147	20937	20937					0.06768565054414921
ILVILTSN	8	Unmodified	_ILVILTSN_					0	0	0			REV__ENSG00000174914|ENST00000642097|OR9G1	REV__ENSG00000174914|ENST00000642097|OR9G1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.77484130859375	2	436.776211	871.537869	-1.136	-0.00049617	-1.8731	-0.00081814	-3.0091	-0.0013143	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.884	3	8898	8898;8911;8923		38.806	6.7195	1	8774400	+		18057	22023	12139	12148	20938;20939;20940	20938					0.0969614356265538
ILVILTSN	8	Unmodified	_ILVILTSN_					0	0	0			REV__ENSG00000174914|ENST00000642097|OR9G1	REV__ENSG00000174914|ENST00000642097|OR9G1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7747497558594	2	436.776211	871.537869	-0.16229	-7.0884E-05	-2.9337	-0.0012814	-3.096	-0.0013523	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.87479	3	9321	9321;9369;9431		47.916	8.0654	1	15341000	+		18058	22023	12139	12148	20941;20942;20943	20941					0.0969614356265538
ILVILTSN	8	Unmodified	_ILVILTSN_					0	0	0			REV__ENSG00000174914|ENST00000642097|OR9G1	REV__ENSG00000174914|ENST00000642097|OR9G1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77490234375	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.87479	5	9054	9054;9065;9089;9113;9174		33.516	8.0654	1	13819000	+		18059	22023	12139	12148	20944;20945;20946;20947;20948	20944					0.0969614356265538
ILVILTSN	8	Unmodified	_ILVILTSN_					0	0	0			REV__ENSG00000174914|ENST00000642097|OR9G1	REV__ENSG00000174914|ENST00000642097|OR9G1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7747802734375	2	436.776211	871.537869	0.64809	0.00028307	-3.7904	-0.0016555	-3.1423	-0.0013725	436.77446931538566	90.701	2.4445	90.855	90.26	92.704	0.15388					187	58	4	0	0	0	0.884	2	9110	9110;9134		33.516	5.2613	1	11761000	+		18060	22023	12139	12148	20949;20950	20949					0.0969614356265538
ILVILTSN	8	Unmodified	_ILVILTSN_					0	0	0			REV__ENSG00000174914|ENST00000642097|OR9G1	REV__ENSG00000174914|ENST00000642097|OR9G1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.77490234375	2	436.776211	871.537869	-1.8179	-0.00079401	-1.324	-0.00057831	-3.1419	-0.0013723	436.77554812926275	90.686	2.546	90.866	90.262	92.808	0.18029					181	60	4	0	0	0	0.8347	7	9075	9006;9016;9027;9063;9075;9124;9149		38.806	5.0535	1	8965000	+		18061	22023	12139	12148	20951;20952;20953;20954;20955;20956;20957	20955					0.0969614356265538
ILVILTSN	8	Unmodified	_ILVILTSN_					0	0	0			REV__ENSG00000174914|ENST00000642097|OR9G1	REV__ENSG00000174914|ENST00000642097|OR9G1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.7748107910156	2	436.776211	871.537869	-0.99178	-0.00043318	-2.1014	-0.00091785	-3.0932	-0.001351	436.7752083239027	90.559	2.3196	91.029	90.562	92.882	0.47068					153	55	5	0	0	0	0.87479	3	10756	10756;10767;10780		33.516	8.0654	1	11924000	+		18062	22023	12139	12148	20958;20959;20960	20958					0.0969614356265538
ILVIRKGWLT	10	Unmodified	_ILVIRKGWLT_					0	0	0		ENST00000441149.6_1_9:130980552-131010310:+|nuORF;nc|ENSG00000106976|Q05193-5|DNM1;nc|ENSG00000106976|Q05193-3|DNM1;nc|ENSG00000106976|Q05193-2|DNM1;ENSG00000106976|ENST00000372923|DNM1	ENST00000441149.6_1_9:130980552-131010310:+|nuORF	ENST00000441149.6_1_9:130980552-131010310:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.2574462890625	3	400.260531	1197.75976	0.012693	5.0806E-06	4.2265	0.0016917	4.2392	0.0016968	400.26217392962513	15.62	0.22285	15.677	15.548	15.771	0.057872					7	5	2	0	0	0	0.37624	1	38	38		11.097	0.50996	1	93853			18063	2325	12140	12149	20961	20961					0.16879422978831826
ILVIVTDES	9	Unmodified	_ILVIVTDES_					0	0	0			REV__ENSG00000117501|ENST00000367759|MROH9	REV__ENSG00000117501|ENST00000367759|MROH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.78021240234375	2	494.78169	987.548827	-0.60063	-0.00029718	-2.0549	-0.0010167	-2.6556	-0.0013139	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.72402	1	8568	8568		38.806	4.6336	1	707910	+		18064	18265	12141	12150	20962	20962					0.05455501146286679
ILVIYIFKT	9	Unmodified	_ILVIYIFKT_					0	0	0		ENST00000265404.6_1_4:68472071-68472191:+|nuORF	ENST00000265404.6_1_4:68472071-68472191:+|nuORF	ENST00000265404.6_1_4:68472071-68472191:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3533935546875	2	555.352086	1108.68962	0.32258	0.00017915	1.7033	0.00094593	2.0259	0.0011251	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.7932	1	10616	10616		24.203	4.8428	1	7708500			18065	9504	12142	12151	20963	20963					0.13962124590375424
ILVKAKPP	8	Unmodified	_ILVKAKPP_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.2557373046875	2	433.297114	864.579674	0.73531	0.00031861	-2.4217	-0.0010493	-1.6864	-0.00073069	433.2956682916674	107.09	0.42498	107.19	106.95	107.38	0.091255					24	10	3	0	0	0	0.4196	1	11488	11488		20.482	1.1219	1	235490	+		18066	17348	12143	12152	20964	20964					0.14196744041839793
ILVKAKPP	8	Unmodified	_ILVKAKPP_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	433.297114	864.579674	-0.16833	-7.2937E-05	-4.5653	-0.0019781	-4.7336	-0.0020511	433.29551347143666	107.27	0.21084	107.23	107.08	107.29	-0.034409	0.11248	0.0001279	NaN	20.482	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86555	+		18067	17348	12143	12152							0.14196744041839793
ILVKAKPP	8	Unmodified	_ILVKAKPP_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	433.297114	864.579674	-1.5573	-0.00067479	-6.5935	-0.0028569	-8.1508	-0.0035317	433.29510268314095	106.9	0.15641	107.05	106.91	107.06	0.14843	-0.073887	-0.0016297	NaN	20.482	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	182670	+		18068	17348	12143	12152							0.14196744041839793
ILVKAKPP	8	Unmodified	_ILVKAKPP_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	433.297114	864.579674	4.7431	0.0020552	-5.2594	-0.0022789	-0.51629	-0.00022371	433.29507774508386	106.86	0.23215	107.01	106.83	107.07	0.14929	-0.10554	-0.00047357	NaN	20.482	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138380	+		18069	17348	12143	12152							0.14196744041839793
ILVKELTT	8	Unmodified	_ILVKELTT_					0	0	0		ENSG00000137265|ENST00000380956|IRF4;nc|ENSG00000137265|Q15306-2|IRF4	ENSG00000137265|ENST00000380956|IRF4	ENSG00000137265|ENST00000380956|IRF4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	458.78765869140625	2	458.789318	915.564084	-1.0758	-0.00049355	-2.797	-0.0012832	-3.8728	-0.0017768	458.7880145411106	93.372	3.7853	93.372	92.851	96.637	0					181	88	4	0	0	0	0.85277	1	9283	9283		25.45	1.2474	1	6725700			18070	4184	12144	12153	20965	20965					0.10292412734122536
ILVKELTT	8	Unmodified	_ILVKELTT_					0	0	0		ENSG00000137265|ENST00000380956|IRF4;nc|ENSG00000137265|Q15306-2|IRF4	ENSG00000137265|ENST00000380956|IRF4	ENSG00000137265|ENST00000380956|IRF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.7877502441406	2	458.789318	915.564084	-1.7492	-0.00080251	-2.1622	-0.00099198	-3.9114	-0.0017945	458.7883137610394	92.976	2.4972	93.168	92.52	95.017	0.19239					169	59	5	0	0	0	0.85277	2	9340	9340;9423		25.45	3.7478	1	11606000			18071	4184	12144	12153	20966;20967	20966					0.10292412734122536
ILVKHMKN	8	Unmodified	_ILVKHMKN_					0	0	0		nc|ENSG00000139144|O75747-2|PIK3C2G;chr12:18346836-18371180|22|13.09|0.59|4.47|+|ENST00000433979|PIK3C2G,PIK3C2G;ENSG00000139144|ENST00000538779|PIK3C2G;chr12:18262792-18282004|25|21.64|0.27|6.32|+|ENST00000675017|PIK3C2G,PIK3C2G	nc|ENSG00000139144|O75747-2|PIK3C2G	nc|ENSG00000139144|O75747-2|PIK3C2G	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79693603515625	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.996	1	67.122	66.622	67.622	0.12649								0	0	0	0.29353	1	5973	5973		28.254	2.8041	1				18072	124	12145	12154	20968	20968					0.08783001050346684
ILVKHMKN	8	Unmodified	_ILVKHMKN_					0	0	0		nc|ENSG00000139144|O75747-2|PIK3C2G;chr12:18346836-18371180|22|13.09|0.59|4.47|+|ENST00000433979|PIK3C2G,PIK3C2G;ENSG00000139144|ENST00000538779|PIK3C2G;chr12:18262792-18282004|25|21.64|0.27|6.32|+|ENST00000675017|PIK3C2G,PIK3C2G	nc|ENSG00000139144|O75747-2|PIK3C2G	nc|ENSG00000139144|O75747-2|PIK3C2G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7950439453125	2	491.796955	981.579357	-0.344	-0.00016918	-1.9041	-0.00093642	-2.2481	-0.0011056	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.85277	1	3987	3987		25.45	6.0902	1	412030			18073	124	12145	12154	20969	20969					0.08783001050346684
ILVKLTVVVEE	11	Unmodified	_ILVKLTVVVEE_					0	0	0			REV__ENSG00000205639|ENST00000338315|MFSD2B	REV__ENSG00000205639|ENST00000338315|MFSD2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3934326171875	2	621.389396	1240.76424	1.3	0.00080781	4.0462	0.0025143	5.3462	0.0033221	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.73893	1	11350	11350		24.519	1.4767	1	23079000	+		18074	23568	12146	12155	20970	20970					0.1534884261109255
ILVKLTVVVEE	11	Unmodified	_ILVKLTVVVEE_					0	0	0			REV__ENSG00000205639|ENST00000338315|MFSD2B	REV__ENSG00000205639|ENST00000338315|MFSD2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.393310546875	2	621.389396	1240.76424	0.92131	0.00057249	4.2568	0.0026451	5.1781	0.0032176	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.76322	1	11228	11228		19.104	0.84144	1	22352000	+		18075	23568	12146	12155	20971	20971					0.1534884261109255
ILVKLTVVVEE	11	Unmodified	_ILVKLTVVVEE_					0	0	0			REV__ENSG00000205639|ENST00000338315|MFSD2B	REV__ENSG00000205639|ENST00000338315|MFSD2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.3915405273438	2	621.389396	1240.76424	2.1086	0.0013103	3.6518	0.0022692	5.7604	0.0035794	621.3915992412323	104.3	2.0291	104.48	104.04	106.07	0.18888					138	51	4	0	0	0	0.60058	2	12750	12649;12750		44.377	5.571	1	1168000	+		18076	23568	12146	12155	20972;20973	20973					0.1534884261109255
ILVKMAKVHAE	11	Unmodified	_ILVKMAKVHAE_					0	0	0			REV__ENSG00000121318|ENST00000240619|TAS2R10	REV__ENSG00000121318|ENST00000240619|TAS2R10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8685302734375	2	619.868108	1237.72166	0.5439	0.00033715	1.4803	0.00091758	2.0242	0.0012547	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.7144	1	11215	11215		29.17	0	1	1280900	+		18077	18451	12147	12156	20974	20974					0.11231169001894159
ILVKQPHDI	9	Unmodified	_ILVKQPHDI_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8169555664062	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.64922	1	8506	8506		44.117	1.2525	1	1159800	+		18078	15467	12148	12157	20975	20975					0.09498308748334239
ILVKQPHDI	9	Unmodified	_ILVKQPHDI_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.817138671875	2	531.818941	1061.62333	0.49482	0.00026316	-4.4068	-0.0023436	-3.912	-0.0020805	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.76255	1	10143	10143		35.618	6.4482	1	1227700	+		18079	15467	12148	12157	20976	20976					0.09498308748334239
ILVKSLSL	8	Unmodified	_ILVKSLSL_					0	0	0		ENSG00000102302|ENST00000375135|FGD1	ENSG00000102302|ENST00000375135|FGD1	ENSG00000102302|ENST00000375135|FGD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7748107910156	2	436.794404	871.574254	2.1549	0.00094127	0.74839	0.00032689	2.9033	0.0012682	436.7954955453474	90.841	0.19563	90.888	90.751	90.947	0.046448					6	4	2	0	0	0	0.4196	1	9431	9431		18.324	0	1	45217			18080	1998	12149	12158	20977	20977					0.13333020459390355
ILVKTSMQV	9	Unmodified	_ILVKTSMQV_					0	0	0			REV__ENSG00000136244|ENST00000258743|IL6	REV__ENSG00000136244|ENST00000258743|IL6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.80621337890625	2	509.801903	1017.58925	0.68681	0.00035014	2.8448	0.0014503	3.5316	0.0018004	509.80326235241614	86.403	4.313	86.552	84.994	89.307	0.14902					345	101	5	0	0	0	0.78983	1	8374	8374		27.882	3.6795	1	3017600	+		18081	19298	12150	12159	20978	20978					0.08116144265068215
ILVKVVAS	8	Unmodified	_ILVKVVAS_					0	0	0			REV__ENSG00000166685|ENST00000299886|COG1	REV__ENSG00000166685|ENST00000299886|COG1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	414.7615051269531	2	414.781296	827.54804	3.0767	0.0012762	-0.15675	-6.5019E-05	2.9199	0.0012111	414.78116753538797	88.374	0.43775	88.424	88.074	88.512	0.050415					14	10	2	0	0	0	0.4196	1	9072	9072		33.516	5.2613	1	42033	+		18082	21310	12151	12160	20979	20979					0.1273675128790046
ILVKVVAS	8	Unmodified	_ILVKVVAS_					0	0	0			REV__ENSG00000166685|ENST00000299886|COG1	REV__ENSG00000166685|ENST00000299886|COG1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	414.781296	827.54804	-1.8106	-0.00075099	-5.5774	-0.0023134	-7.3879	-0.0030644	414.77907688348705	88.234	0.5179	88.435	88.143	88.661	0.20114	0.0054848	-0.00044434	NaN	33.516	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110170	+		18083	21310	12151	12160							0.1273675128790046
ILVLDVPLVV	10	Unmodified	_ILVLDVPLVV_					0	0	0			REV__ENSG00000147606|ENST00000276609|SLC26A7	REV__ENSG00000147606|ENST00000276609|SLC26A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.3585205078125	2	540.357368	1078.70018	-0.09847	-5.3209E-05	2.5238	0.0013637	2.4253	0.0013105	540.3585531343375	36.951	1.7168	36.927	36.371	38.088	-0.023979					87	38	3	0	0	0	0.86452	1	2394	2394		30.504	7.4612	1	433100	+		18084	20078	12152	12161	20980	20980					0.16398107244822313
ILVLDVPLVV	10	Unmodified	_ILVLDVPLVV_					0	0	0			REV__ENSG00000147606|ENST00000276609|SLC26A7	REV__ENSG00000147606|ENST00000276609|SLC26A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.3584594726562	2	540.357368	1078.70018	-0.068166	-3.6834E-05	2.3888	0.0012908	2.3206	0.001254	540.3584971364328	36.917	1.6881	36.864	36.337	38.025	-0.053558					103	37	4	0	0	0	0.85939	1	2496	2496		23.042	5.6775	1	646150	+		18085	20078	12152	12161	20981	20981					0.16398107244822313
ILVLDVPLVV	10	Unmodified	_ILVLDVPLVV_					0	0	0			REV__ENSG00000147606|ENST00000276609|SLC26A7	REV__ENSG00000147606|ENST00000276609|SLC26A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3587646484375	2	540.357368	1078.70018	-0.87065	-0.00047046	3.4074	0.0018412	2.5367	0.0013707	540.3590107608643	36.885	1.6	36.896	36.391	37.991	0.011173					96	35	4	0	0	0	0.85438	1	2431	2431		16.473	0	1	594400	+		18086	20078	12152	12161	20982	20982					0.16398107244822313
ILVLFAKWAR	10	Unmodified	_ILVLFAKWAR_					0	0	0		chr6:31834938-31835411|23|121.04|0.1|10.19|+|1|None,SNHG32|1	chr6:31834938-31835411|23|121.04|0.1|10.19|+|1|None,SNHG32|1	chr6:31834938-31835411|23|121.04|0.1|10.19|+|1|None,SNHG32|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2588806152344	3	406.257009	1215.7492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.264	1	57.235	56.735	57.735	-0.02866								0	0	0	0.45132	1	5276	5276		16.007	1.3131	1				18087	477	12153	12162	20983	20983					0.1499544032437825
ILVLLTVLALL	11	Unmodified	_ILVLLTVLALL_					0	0	0		ENSG00000187266|ENST00000222139|EPOR;nc|ENSG00000187266|P19235-3|EPOR	ENSG00000187266|ENST00000222139|EPOR	ENSG00000187266|ENST00000222139|EPOR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.86669921875	2	590.917593	1179.82063	-0.64338	-0.00038018	-3.5136	-0.0020762	-4.1569	-0.0024564	590.9143575117115	103.68	0.47692	103.68	103.51	103.99	-0.0035782					18	11	2	0	0	0	0.1725	1	11170	11170		27.882	0	1	131710			18088	7852	12154	12163	20984	20984					0.23791515238394823
ILVLPPWLSI	10	Unmodified	_ILVLPPWLSI_					0	0	0			REV__ENSG00000146828|ENST00000354161|SLC12A9	REV__ENSG00000146828|ENST00000354161|SLC12A9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.84326171875	2	575.86536	1149.71617	0.79958	0.00046045	-0.96173	-0.00055382	-0.16215	-9.3377E-05	575.8650444110591	92.262	0.59615	92.421	92.028	92.624	0.15875					18	13	2	0	0	0	0.37624	1	9301	9301		10.866	0	1	78272	+		18089	20034	12155	12164	20985	20985					0.1472981348169924
ILVLQRHF	8	Unmodified	_ILVLQRHF_					0	0	0		ENST00000397885.2_1_9:2837287-2844066:-|nuORF	ENST00000397885.2_1_9:2837287-2844066:-|nuORF	ENST00000397885.2_1_9:2837287-2844066:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3175048828125	2	513.316369	1024.61818	-1.3651	-0.00070072	2.2159	0.0011375	0.85085	0.00043675	513.3175456130648	53.876	2.1608	53.876	52.509	54.67	0					97	64	3	0	0	0	0.86791	1	4484	4484		28.254	2.6802	1	276500			18090	11164	12156	12165	20986	20986					0.10686049676360199
ILVLRGGPIQ	10	Unmodified	_ILVLRGGPIQ_					0	0	0			REV__ENST00000477183.1_1_9:6492313-6492544:+|nuORF	REV__ENST00000477183.1_1_9:6492313-6492544:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.3400268554688	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.67608	1	10072	10072		45.952	8.1404	1	1199500	+		18091	27349	12157	12166	20987	20987					0.1408658801931324
ILVLRGGPIQ	10	Unmodified	_ILVLRGGPIQ_					0	0	0			REV__ENST00000477183.1_1_9:6492313-6492544:+|nuORF	REV__ENST00000477183.1_1_9:6492313-6492544:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3399658203125	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.85939	1	10587	10587		23.042	0	1	2530900	+		18092	27349	12157	12166	20988	20988					0.1408658801931324
ILVLRGGPIQ	10	Unmodified	_ILVLRGGPIQ_					0	0	0			REV__ENST00000477183.1_1_9:6492313-6492544:+|nuORF	REV__ENST00000477183.1_1_9:6492313-6492544:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.3403930664062	2	533.342584	1064.67061	-1.5064	-0.00080343	-2.9287	-0.001562	-4.4351	-0.0023654	533.3409139496441	99.132	2.1048	99.317	98.763	100.87	0.18582					141	48	4	0	0	0	0.85939	3	10250	10250;10333;10346		29.15	9.7896	1	1837700	+		18093	27349	12157	12166	20989;20990;20991	20989					0.1408658801931324
ILVLSVIPVV	10	Unmodified	_ILVLSVIPVV_					0	0	0		nc|ENSG00000015520|Q9UHC9|NPC1L1;nc|ENSG00000015520|Q9UHC9-4|NPC1L1;nc|ENSG00000015520|Q9UHC9-2|NPC1L1;ENSG00000015520|ENST00000381160|NPC1L1;nc|ENSG00000015520|Q9UHC9-3|NPC1L1	nc|ENSG00000015520|Q9UHC9|NPC1L1	nc|ENSG00000015520|Q9UHC9|NPC1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.8574829101562	2	526.359911	1050.70527	0.25296	0.00013315	2.2538	0.0011863	2.5068	0.0013195	526.3609378895691	36.94	1.9118	37.039	36.051	37.962	0.099277					159	60	4	0	0	0	0.86201	1	2167	2167		24.203	1.1603	1	1522000			18094	14740	12158	12167	20992	20992					0.1819441110740172
ILVLTISGD	9	Unmodified	_ILVLTISGD_					0	0	0		nc|ENSG00000127329|P23467-4|PTPRB;nc|ENSG00000127329|P23467-2|PTPRB;nc|ENSG00000127329|P23467|PTPRB;ENSG00000127329|ENST00000334414|PTPRB	nc|ENSG00000127329|P23467-4|PTPRB	nc|ENSG00000127329|P23467-4|PTPRB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7773742675781	2	465.778951	929.543348	-1.2002	-0.00055902	-1.7507	-0.00081543	-2.9509	-0.0013744	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.69914	1	7623	7623		40.573	1.7665	1	683640			18095	3492	12159	12168	20993	20993					0.07575822354465345
ILVMLSIKVNR	11	Unmodified	_ILVMLSIKVNR_					0	0	0		ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.406005859375	2	643.404858	1284.79516	-0.027625	-1.7774E-05	3.2969	0.0021213	3.2693	0.0021035	643.4069538956494	107.53	1.1842	107.49	106.64	107.82	-0.034401					87	27	4	0	0	0	0.7342	1	11712	11712		25.574	1.0549	1	2502500			18096	7340	12160	12169	20994	20994					0.16415717444351685
ILVMLSIKVNR	11	Unmodified	_ILVMLSIKVNR_					0	0	0		ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.406005859375	2	643.404858	1284.79516	2.6785	0.0017233	-1.0241	-0.00065892	1.6544	0.0010644	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.69995	1	11702	11702		31.53	0	1	14704000			18097	7340	12160	12169	20995	20995					0.16415717444351685
ILVMLSIKVNR	11	Unmodified	_ILVMLSIKVNR_					0	0	0		ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.40576171875	2	643.404858	1284.79516	1.6039	0.001032	0.24014	0.00015451	1.8441	0.0011865	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.63176	3	11252	11204;11252;11288		40.778	8.2932	1	21138000			18098	7340	12160	12169	20996;20997;20998	20997					0.16415717444351685
ILVMLSIKVNR	11	Unmodified	_ILVMLSIKVNR_					0	0	0		ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.405517578125	2	643.404858	1284.79516	0.94326	0.0006069	0.46246	0.00029755	1.4057	0.00090445	643.4049918963857	105.64	1.1738	105.75	104.98	106.16	0.10766					144	29	6	0	0	0	0.6921	1	11214	11214		32.812	1.2826	1	23114000			18099	7340	12160	12169	20999	20999					0.16415717444351685
ILVMLSIKVNR	11	Unmodified	_ILVMLSIKVNR_					0	0	0		ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.40576171875	2	643.404858	1284.79516	-1.1464	-0.0007376	2.6984	0.0017362	1.552	0.00099859	643.406459620359	105.63	1.1927	105.7	104.97	106.16	0.073112					153	29	6	0	0	0	0.7144	1	11176	11176		29.17	3.596	1	22367000			18100	7340	12160	12169	21000	21000					0.16415717444351685
ILVPLVQE	8	Unmodified	_ILVPLVQE_					0	0	0		nc|ENSG00000146842|Q96SK2-3|TMEM209;nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209	nc|ENSG00000146842|Q96SK2-3|TMEM209	nc|ENSG00000146842|Q96SK2-3|TMEM209	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.7837219238281	2	455.784036	909.553519	0.22092	0.00010069	1.0481	0.00047773	1.2691	0.00057842	455.78429383584523	43.788	2.2099	43.762	42.925	45.135	-0.026768					87	51	2	0	0	0	0.86791	1	3363	3363		28.254	1.4582	1	242760			18101	4864	12161	12170	21001	21001					0.09512430079701062
ILVPQAIA	8	Unmodified	_ILVPQAIA_					0	0	0		nc|ENSG00000145217|Q9H2B4-2|SLC26A1;ENSG00000145217|ENST00000398516|SLC26A1	nc|ENSG00000145217|Q9H2B4-2|SLC26A1	nc|ENSG00000145217|Q9H2B4-2|SLC26A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.766845703125	2	412.765646	823.516739	1.2585	0.00051947	2.4286	0.0010024	3.6871	0.0015219	412.7665201070099	37.01	2.3211	37.292	35.703	38.024	0.28173					152	57	4	0	0	0	0.80127	1	2835	2835		16.705	1.0687	1	3102100			18102	4754	12162	12171	21002	21002					0.0979217825380374
ILVPRQSGVNR	11	Unmodified	_ILVPRQSGVNR_					0	0	0			REV__ENST00000209875.8_1_12:54632788-54632935:-|nuORF	REV__ENST00000209875.8_1_12:54632788-54632935:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.869384765625	2	619.870028	1237.7255	1.7162	0.0010638	-2.4227	-0.0015017	-0.70652	-0.00043795	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.73893	1	11353	11353		24.519	0.99649	1	4719500	+		18103	24110	12163	12172	21003	21003					0.11614974819940471
ILVQCKPSSVP	11	Unmodified	_ILVQCKPSSVP_					0	0	0		ENST00000396161.9_2_19:58131723-58131813:+|nuORF	ENST00000396161.9_2_19:58131723-58131813:+|nuORF	ENST00000396161.9_2_19:58131723-58131813:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	585.8301391601562	2	585.831191	1169.64783	-0.26333	-0.00015427	-1.4623	-0.00085664	-1.7256	-0.0010109	585.830277494987	57.754	1.2846	57.738	57.257	58.542	-0.01643					107	58	2	0	0	0	0.61369	1	4897	4897		42.864	2.0861	1	182280			18104	11112	12164	12173	21004	21004					0.06979200839532496
ILVQGKEIPL	10	Unmodified	_ILVQGKEIPL_					0	0	0		ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.3536376953125	2	555.350074	1108.6856	1.3083	0.00072658	4.4118	0.0024501	5.7201	0.0031767	555.3524110053091	100.9	2.53	100.95	100.38	102.91	0.046356					182	60	5	0	0	0	0.64457	1	10944	10944		47.657	6.8792	1	5418400			18105	12263	12165	12174	21005	21005					0.13560035096679712
ILVQGKEIPL	10	Unmodified	_ILVQGKEIPL_					0	0	0		ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.3533325195312	2	555.350074	1108.6856	2.1967	0.00122	4.1632	0.0023121	6.36	0.003532	555.3522704950425	100.68	0.92799	101.03	100.57	101.5	0.3459					69	22	4	0	0	0	0.53935	2	12218	12218;12253		53.351	7.3792	1	1353700			18106	12263	12165	12174	21006;21007	21006					0.13560035096679712
ILVQILFLTLL	11	Unmodified	_ILVQILFLTLL_					0	0	0		ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.40576171875	2	643.428325	1284.8421	0.94272	0.00060657	-0.43597	-0.00028052	0.50675	0.00032606	643.4279263381623	105.18	0.19727	105.29	105.19	105.39	0.10766					6	4	2	0	0	0	0.1729	1	11203	11203		26.693	2.1737	1	80086			18107	9022	12166	12175	21008	21008					0.21106900267136552
ILVRIVRAYN	10	Unmodified	_ILVRIVRAYN_					0	0	0		ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2568664550781	3	406.255669	1215.74518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.094	1	67.147	66.647	67.647	0.052368								0	0	0	0.45132	1	5964	5964		32.751	13.488	1				18108	7945	12167	12176	21009	21009					0.14593350830705276
ILVRLGDKW	9	Unmodified	_ILVRLGDKW_					0	0	0			REV__nc|ENSG00000290798|Q9H1B4|NXF5	REV__nc|ENSG00000290798|Q9H1B4|NXF5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.3358764648438	2	550.334759	1098.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.04	1	119.01	118.51	119.51	-0.024033								0	0	0	0.32159	1	13189	13189		23.042	1.0826	1		+		18109	30298	12168	12177	21010	21010					0.10958301502273571
ILVRTIVSPGV	11	Unmodified	_ILVRTIVSPGV_					0	0	0			REV__chr10:7469593-7472770|17|11.41|0.0|11.22|-|2|TE_info:MLT1D,MLT1D_dup12423,ERVL-MaLR,LTR,donor,-,7472770,7473163|LINC02642,None|6	REV__chr10:7469593-7472770|17|11.41|0.0|11.22|-|2|TE_info:MLT1D,MLT1D_dup12423,ERVL-MaLR,LTR,donor,-,7472770,7473163|LINC02642,None|6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3660888671875	2	577.368798	1152.72304	-0.31736	-0.00018324	-3.4769	-0.0020075	-3.7943	-0.0021907	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.7144	1	10606	10606		29.17	9.1733	1	6617600	+		18110	15481	12169	12178	21011	21011					0.1527912636227029
ILVRTIVSPGV	11	Unmodified	_ILVRTIVSPGV_					0	0	0			REV__chr10:7469593-7472770|17|11.41|0.0|11.22|-|2|TE_info:MLT1D,MLT1D_dup12423,ERVL-MaLR,LTR,donor,-,7472770,7473163|LINC02642,None|6	REV__chr10:7469593-7472770|17|11.41|0.0|11.22|-|2|TE_info:MLT1D,MLT1D_dup12423,ERVL-MaLR,LTR,donor,-,7472770,7473163|LINC02642,None|6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.3662109375	2	577.368798	1152.72304	-0.96039	-0.0005545	-2.9913	-0.0017271	-3.9517	-0.0022816	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.6921	1	11004	11004		32.812	1.2826	1	9850700	+		18111	15481	12169	12178	21012	21012					0.1527912636227029
ILVSAGLLMA	10	Unmodified	_ILVSAGLLMA_					0	0	0			REV__nc|ENSG00000211810|P04437|TRAV29DV5	REV__nc|ENSG00000211810|P04437|TRAV29DV5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.3007507324219	2	494.298996	986.583439	-0.074801	-3.6974E-05	3.5667	0.001763	3.4919	0.001726	494.30075143902303	97.483	4.0876	97.54	96.775	100.86	0.056839					393	94	6	0	0	0	0.86452	1	10679	10679		30.504	1.3541	1	54076000	+		18112	30190	12170	12179	21013	21013					0.08961045753392227
ILVSAGLLMA	10	Unmodified	_ILVSAGLLMA_					0	0	0			REV__nc|ENSG00000211810|P04437|TRAV29DV5	REV__nc|ENSG00000211810|P04437|TRAV29DV5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.3008728027344	2	494.298996	986.583439	1.003	0.00049577	2.6902	0.0013297	3.6931	0.0018255	494.3002402240543	96.954	3.9557	97.359	96.674	100.63	0.40498					299	97	6	0	0	0	0.81018	1	11680	11680		38.806	0	1	25258000	+		18113	30190	12170	12179	21014	21014					0.08961045753392227
ILVSASIVE	9	Unmodified	_ILVSASIVE_					0	0	0			REV__ENST00000427063.6_1_10:29710617-29711127:+|nuORF	REV__ENST00000427063.6_1_10:29710617-29711127:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7773132324219	2	465.778951	929.543348	0.5788	0.00026959	-3.4798	-0.0016208	-2.901	-0.0013512	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.7932	1	7502	7502		23.042	2.5607	1	344270	+		18114	26551	12171	12180	21015	21015					0.07575822354476713
ILVSLTMKN	9	Unmodified	_ILVSLTMKN_					0	0	0		ENSG00000149311|ENST00000675843|ATM;ENST00000525012.5_1_11:108123562-108123637:+|nuORF	ENSG00000149311|ENST00000675843|ATM	ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8038024902344	2	509.801903	1017.58925	-0.38177	-0.00019462	3.8836	0.0019799	3.5019	0.0017853	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.78058	1	8208	8208		30.504	6.3009	1	948010			18115	5019	12172	12181	21016	21016					0.08116144265056846
ILVSMRKN	8	Unmodified	_ILVSMRKN_					0	0	0			REV__ENST00000559009.1_1_15:102312406-102316387:-|nuORF	REV__ENST00000559009.1_1_15:102312406-102316387:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.80108642578125	2	480.786587	959.558621	-0.53903	-0.00025916	1.6668	0.00080136	1.1277	0.0005422	480.78703309777836	95.061	0.25211	95.108	94.876	95.128	0.046173					8	5	2	0	0	0	0.4196	1	10012	10012		38.806	12.01	1	72629	+		18116	28744	12173	12182	21017	21017					0.07722410670680802
ILVSREAR	8	Unmodified	_ILVSREAR_					0	0	0			REV__ENSG00000104899|ENST00000221496|AMH	REV__ENSG00000104899|ENST00000221496|AMH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28790283203125	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.85277	1	10160	10160		25.45	1.2474	1	50946000	+		18117	17486	12174	12183	21018	21018					0.0874858239999412
ILVSRLDTKLH	11	Unmodified	_ILVSRLDTKLH_					0	0	0		ENSG00000124657|ENST00000244623|OR2B6	ENSG00000124657|ENST00000244623|OR2B6	ENSG00000124657|ENST00000244623|OR2B6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3943481445312	2	647.895712	1293.77687	-0.075868	-4.9155E-05	2.6511	0.0017177	2.5753	0.0016685	648.3981915779191	58.072	0.48468	58.056	57.758	58.243	-0.01643					34	22	2	0	0	0	0.72739	1	4923	4923		27.047	5.3616	1	78794			18118	3351	12175	12184	21019	21019					0.14173298793980393
ILVSRLDTKLH	11	Unmodified	_ILVSRLDTKLH_					0	0	0		ENSG00000124657|ENST00000244623|OR2B6	ENSG00000124657|ENST00000244623|OR2B6	ENSG00000124657|ENST00000244623|OR2B6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	647.895712	1293.77687	2.0906	0.0013545	0.3447	0.00022333	2.4353	0.0015778	648.3975912269203	57.678	0.31088	58.233	58.078	58.389	0.55512	0.088692	-0.0016808	NaN	27.047	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	180660			18119	3351	12175	12184							0.14173298793980393
ILVSSMLE	8	Oxidation (M)	_ILVSSM(Oxidation (M))LE_		ILVSSM(1)LE		ILVSSM(60)LE	0	0	1		ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1;nc|ENSG00000187240|Q8NCM8-3|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	454.2423400878906	2	454.243886	906.47322	-1.2476	-0.00056673	-2.2851	-0.001038	-3.5328	-0.0016047	454.24278433345404	83.268	0.765	83.268	82.933	83.698	0					27	19	2	0	0	0	0.84634	1	7821	7821		60.294	12.378	1	150500			18120	7849	12176	12185	21020	21020		134			0.016242006943684828
ILVSTTPVT	9	Unmodified	_ILVSTTPVT_					0	0	0		nc|ENSG00000169876|Q685J3-2|MUC17;ENSG00000169876|ENST00000306151|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7774963378906	2	465.778951	929.543348	-0.11871	-5.5291E-05	-2.8407	-0.0013231	-2.9594	-0.0013784	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.77546	2	8201	8118;8201		31.955	6.5047	1	1083800			18121	6534	12177	12186	21021;21022	21022					0.07575822354476713
ILVSTTPVT	9	Unmodified	_ILVSTTPVT_					0	0	0		nc|ENSG00000169876|Q685J3-2|MUC17;ENSG00000169876|ENST00000306151|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77752685546875	2	465.778951	929.543348	0.52254	0.00024339	-3.5179	-0.0016386	-2.9953	-0.0013952	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.62081	1	8445	8445		45.952	1.8352	1	1330400			18122	6534	12177	12186	21023	21023					0.07575822354476713
ILVTPQKI	8	Unmodified	_ILVTPQKI_					0	0	0			REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3019104003906	2	456.299853	910.585153	-1.6896	-0.00077098	4.4336	0.0020231	2.744	0.0012521	456.30174360814857	51.937	1.2506	51.937	51.624	52.874	0					54	32	2	0	0	0	0.81548	1	4250	4250		20.482	0	1	89537	+		18123	23203	12178	12187	21024	21024					0.1262842283365444
ILVTPQKI	8	Unmodified	_ILVTPQKI_					0	0	0			REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.3012390136719	2	456.299853	910.585153	0.82269	0.00037539	2.1236	0.000969	2.9463	0.0013444	456.30067401982916	32.79	1.601	33.001	32.465	34.066	0.21168					118	37	4	0	0	0	0.88915	1	2348	2348		35.201	1.6851	1	2892400	+		18124	23203	12178	12187	21025	21025					0.1262842283365444
ILVVDATSL	9	Unmodified	_ILVVDATSL_					0	0	0		ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7	ENSG00000091157|ENST00000254442|WDR7	ENSG00000091157|ENST00000254442|WDR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7774658203125	2	465.778951	929.543348	-0.1189	-5.538E-05	-2.6882	-0.0012521	-2.8071	-0.0013075	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.72402	1	7794	7794		38.806	5.2906	1	345200			18125	1672	12179	12188	21026	21026					0.07575822354476713
ILVVDATSL	9	Unmodified	_ILVVDATSL_					0	0	0		ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7	ENSG00000091157|ENST00000254442|WDR7	ENSG00000091157|ENST00000254442|WDR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774658203125	2	465.778951	929.543348	0.52254	0.00024339	-3.5179	-0.0016386	-2.9953	-0.0013952	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.69914	1	8360	8360		40.573	1.7665	1	1330400			18126	1672	12179	12188	21027	21027					0.07575822354476713
ILVVDKLPE	9	Unmodified	_ILVVDKLPE_					0	0	0			REV__nc|ENSG00000286095|A0A087WV53|SPEGNB	REV__nc|ENSG00000286095|A0A087WV53|SPEGNB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.31689453125	2	513.3157	1024.61685	-1.3651	-0.00070072	3.5186	0.0018062	2.1536	0.0011055	513.3175456130648	53.876	2.1608	53.876	52.509	54.67	0					97	64	3	0	0	0	0.7932	1	4475	4475		23.042	2.5607	1	276500	+		18127	30284	12180	12189	21028	21028					0.1055237079692688
ILVVDKLPE	9	Unmodified	_ILVVDKLPE_					0	0	0			REV__nc|ENSG00000286095|A0A087WV53|SPEGNB	REV__nc|ENSG00000286095|A0A087WV53|SPEGNB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.318603515625	2	513.3157	1024.61685	-0.0063971	-3.2837E-06	2.3192	0.0011905	2.3128	0.0011872	513.3168980017223	55.245	1.1626	55.238	54.853	56.015	-0.0077057					50	31	3	0	0	0	0.72402	1	4925	4925		38.806	1.7777	1	234670	+		18128	30284	12180	12189	21029	21029					0.1055237079692688
ILVVDKLPE	9	Unmodified	_ILVVDKLPE_					0	0	0			REV__nc|ENSG00000286095|A0A087WV53|SPEGNB	REV__nc|ENSG00000286095|A0A087WV53|SPEGNB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8153686523438	2	513.3157	1024.61685	0.40552	0.00020816	1.4026	0.00071996	1.8081	0.00092812	513.3165443291848	55.171	1.2841	55.262	54.835	56.119	0.091164					59	39	2	0	0	0	0.48102	1	4594	4594		52.937	5.2794	1	269410	+		18129	30284	12180	12189	21030	21030					0.1055237079692688
ILVVDKLPE	9	Unmodified	_ILVVDKLPE_					0	0	0			REV__nc|ENSG00000286095|A0A087WV53|SPEGNB	REV__nc|ENSG00000286095|A0A087WV53|SPEGNB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8153686523438	2	513.3157	1024.61685	0.40552	0.00020816	1.4026	0.00071996	1.8081	0.00092812	513.3165443291848	55.171	1.2841	55.262	54.835	56.119	0.091164					59	39	2	0	0	0	0.20789	1	4594	4594		52.937	5.2794	1	269410	+		18130	30284	12180	12189	21031	21031					0.1055237079692688
ILVVEVKDP	9	Unmodified	_ILVVEVKDP_					0	0	0		ENSG00000169271|ENST00000302005|HSPB3	ENSG00000169271|ENST00000302005|HSPB3	ENSG00000169271|ENST00000302005|HSPB3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3081970214844	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.008	1	43.95	43.45	44.45	-0.058262								0	0	0	0.30416	1	3071	3071		29.15	1.2673	1				18131	6484	12181	12190	21032	21032					0.09632084279905939
ILVVITFAF	9	Unmodified	_ILVVITFAF_					0	0	0		ENSG00000112486|ENST00000341935|CCR6	ENSG00000112486|ENST00000341935|CCR6	ENSG00000112486|ENST00000341935|CCR6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.3232421875	2	511.817879	1021.6212	2.1339	0.0010922	3.3737	0.0017267	5.5076	0.0028189	511.8195868154157	106.77	0.5724	106.87	106.55	107.13	0.10396					38	23	2	0	0	0	0.76996	1	12999	12999		33.516	10.473	1	209460			18132	2664	12182	12191	21033	21033					0.11125880010513356
ILVVKCKAS	9	Unmodified	_ILVVKCKAS_					0	0	0		ENSG00000115998|ENST00000264434|C2orf42	ENSG00000115998|ENST00000264434|C2orf42	ENSG00000115998|ENST00000264434|C2orf42	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.80133056640625	2	480.799163	959.583773	-0.095215	-4.5779E-05	3.4854	0.0016758	3.3902	0.00163	480.80074135922035	95.38	4.3631	95.446	94.67	99.033	0.065918					323	101	5	0	0	0	0.7932	1	10194	10194		26.693	2.4902	1	17278000			18133	2891	12183	12192	21034	21034					0.10236465473246881
ILVVKCKAS	9	Unmodified	_ILVVKCKAS_					0	0	0		ENSG00000115998|ENST00000264434|C2orf42	ENSG00000115998|ENST00000264434|C2orf42	ENSG00000115998|ENST00000264434|C2orf42	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.8019714355469	2	480.799163	959.583773	-0.79098	-0.0003803	4.1385	0.0019898	3.3475	0.0016095	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.7932	1	10022	10022		23.042	1.3402	1	18644000			18134	2891	12183	12192	21035	21035					0.10236465473246881
ILVVLLSYTL	10	Unmodified	_ILVVLLSYTL_					0	0	0		chr1:244654025-244686597|52|10.42|0.43|4.58|+|ENST00000418162|DESI2,DESI2	chr1:244654025-244686597|52|10.42|0.43|4.58|+|ENST00000418162|DESI2,DESI2	chr1:244654025-244686597|52|10.42|0.43|4.58|+|ENST00000418162|DESI2,DESI2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.363037109375	2	567.36265	1132.71075	-0.82344	-0.00046719	2.4008	0.0013621	1.5773	0.00089493	567.3638410249442	44.579	2.1787	44.545	43.955	46.134	-0.03347					156	50	5	0	0	0	0.84874	1	3574	3574		18.324	0	1	2613600			18135	45	12184	12193	21036	21036					0.14970089899247796
ILVVLLSYTL	10	Unmodified	_ILVVLLSYTL_					0	0	0		chr1:244654025-244686597|52|10.42|0.43|4.58|+|ENST00000418162|DESI2,DESI2	chr1:244654025-244686597|52|10.42|0.43|4.58|+|ENST00000418162|DESI2,DESI2	chr1:244654025-244686597|52|10.42|0.43|4.58|+|ENST00000418162|DESI2,DESI2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.363525390625	2	567.36265	1132.71075	0.15466	8.7749E-05	1.5374	0.00087224	1.692	0.00095999	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.86201	1	3203	3203		24.203	1.1603	1	1937600			18136	45	12184	12193	21037	21037					0.14970089899247796
ILVVVCCLI	9	Unmodified	_ILVVVCCLI_					0	0	0		ENST00000463593.6_1_9:95060120-95060712:-|nuORF	ENST00000463593.6_1_9:95060120-95060712:-|nuORF	ENST00000463593.6_1_9:95060120-95060712:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7908020019531	2	487.792492	973.570431	-0.71211	-0.00034736	-3.3954	-0.0016563	-4.1075	-0.0020036	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.72098	1	7755	7755		39.021	5.5059	1	678280			18137	12071	12185	12194	21038	21038					0.08258891369644061
ILVVVCCLI	9	Unmodified	_ILVVVCCLI_					0	0	0		ENST00000463593.6_1_9:95060120-95060712:-|nuORF	ENST00000463593.6_1_9:95060120-95060712:-|nuORF	ENST00000463593.6_1_9:95060120-95060712:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79071044921875	2	487.792492	973.570431	-1.4525	-0.00070854	-2.6818	-0.0013081	-4.1343	-0.0020167	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.78292	1	7880	7880		29.842	5.3375	1	503530			18138	12071	12185	12194	21039	21039					0.08258891369644061
ILVVVLCCI	9	Unmodified	_ILVVVLCCI_					0	0	0		nc|ENSG00000164300|Q86VE9-3|SERINC5;nc|ENSG00000164300|Q86VE9-2|SERINC5;nc|ENSG00000164300|Q86VE9|SERINC5;ENSG00000164300|ENST00000507668|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.790283203125	2	487.792492	973.570431	-1.0855	-0.00052952	-2.9747	-0.001451	-4.0602	-0.0019806	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.78292	1	7675	7675		29.842	5.6388	1	309700			18139	5948	12186	12195	21040	21040					0.08258891369644061
ILVVVLCCI	9	Unmodified	_ILVVVLCCI_					0	0	0		nc|ENSG00000164300|Q86VE9-3|SERINC5;nc|ENSG00000164300|Q86VE9-2|SERINC5;nc|ENSG00000164300|Q86VE9|SERINC5;ENSG00000164300|ENST00000507668|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7903137207031	2	487.792492	973.570431	-1.4694	-0.00071678	-2.5668	-0.0012521	-4.0362	-0.0019688	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.72098	1	8306	8306		39.021	9.18	1	607090			18140	5948	12186	12195	21041	21041					0.08258891369644061
ILVVVLCCI	9	Unmodified	_ILVVVLCCI_					0	0	0		nc|ENSG00000164300|Q86VE9-3|SERINC5;nc|ENSG00000164300|Q86VE9-2|SERINC5;nc|ENSG00000164300|Q86VE9|SERINC5;ENSG00000164300|ENST00000507668|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79071044921875	2	487.792492	973.570431	-1.3135	-0.00064074	-2.5361	-0.0012371	-3.8496	-0.0018778	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.78292	1	8646	8646		29.842	5.3375	1	2239000			18141	5948	12186	12195	21042	21042					0.08258891369644061
ILVVVLCCI	9	Unmodified	_ILVVVLCCI_					0	0	0		nc|ENSG00000164300|Q86VE9-3|SERINC5;nc|ENSG00000164300|Q86VE9-2|SERINC5;nc|ENSG00000164300|Q86VE9|SERINC5;ENSG00000164300|ENST00000507668|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7902526855469	2	487.792492	973.570431	-0.71211	-0.00034736	-3.3954	-0.0016563	-4.1075	-0.0020036	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.78292	1	8000	8000		29.842	0	1	678280			18142	5948	12186	12195	21043	21043					0.08258891369644061
ILVVVLCCI	9	Unmodified	_ILVVVLCCI_					0	0	0		nc|ENSG00000164300|Q86VE9-3|SERINC5;nc|ENSG00000164300|Q86VE9-2|SERINC5;nc|ENSG00000164300|Q86VE9|SERINC5;ENSG00000164300|ENST00000507668|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.79052734375	2	487.792492	973.570431	0.64551	0.00031488	-4.4861	-0.0021883	-3.8406	-0.0018734	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.78292	1	8092	8092		29.842	6.7991	1	1929300			18143	5948	12186	12195	21044	21044					0.08258891369644061
ILVVVLCCI	9	Unmodified	_ILVVVLCCI_					0	0	0		nc|ENSG00000164300|Q86VE9-3|SERINC5;nc|ENSG00000164300|Q86VE9-2|SERINC5;nc|ENSG00000164300|Q86VE9|SERINC5;ENSG00000164300|ENST00000507668|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7908020019531	2	487.792492	973.570431	-1.4525	-0.00070854	-2.6818	-0.0013081	-4.1343	-0.0020167	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.78292	1	7797	7797		29.842	0	1	503530			18144	5948	12186	12195	21045	21045					0.08258891369644061
ILVVVLCCI	9	Unmodified	_ILVVVLCCI_					0	0	0		nc|ENSG00000164300|Q86VE9-3|SERINC5;nc|ENSG00000164300|Q86VE9-2|SERINC5;nc|ENSG00000164300|Q86VE9|SERINC5;ENSG00000164300|ENST00000507668|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79071044921875	2	487.792492	973.570431	-1.5393	-0.00075085	-2.322	-0.0011326	-3.8612	-0.0018835	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.72098	1	8199	8199		39.021	1.21	1	1760400			18145	5948	12186	12195	21046	21046					0.08258891369644061
ILVVVLQEKIA	11	Unmodified	_ILVVVLQEKIA_					0	0	0		ENSG00000141376|ENST00000407086|BCAS3;nc|ENSG00000141376|Q9H6U6|BCAS3;nc|ENSG00000141376|Q9H6U6-7|BCAS3;nc|ENSG00000141376|Q9H6U6-3|BCAS3;nc|ENSG00000141376|Q9H6U6-8|BCAS3	ENSG00000141376|ENST00000407086|BCAS3	ENSG00000141376|ENST00000407086|BCAS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.9335632324219	3	408.935713	1223.78531	-1.9388	-0.00079284	-2.2438	-0.00091758	-4.1826	-0.0017104	408.93476832528296	16.248	0.87597	16.296	16.053	16.929	0.047802					86	39	4	0	0	0	0.75544	1	139	139		20.837	0.80668	1	909210			18146	4493	12187	12196	21047	21047					0.18236852710629137
ILVWMVTI	8	Unmodified	_ILVWMVTI_					0	0	0		nc|ENSG00000188467|Q71RS6-2|SLC24A5;ENSG00000188467|ENST00000341459|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.79058837890625	2	487.790807	973.56706	-1.0481	-0.00051127	0.8293	0.00040452	-0.21883	-0.00010674	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.89457	2	8046	8046;8075		37.028	3.5355	1	1176800			18147	7930	12188	12197	21048;21049	21048					0.07921964587308139
ILVYPCSTK	9	Unmodified	_ILVYPCSTK_					0	0	0			REV__ENSG00000131379|ENST00000253697|C3orf20	REV__ENSG00000131379|ENST00000253697|C3orf20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2811889648438	2	512.280803	1022.54705	0.38138	0.00019537	0.68002	0.00034836	1.0614	0.00054374	512.2810762358159	86.258	3.4931	86.314	85.063	88.556	0.055649					143	81	2	0	0	0	0.74721	1	8869	8869		37.159	3.6435	1	344420	+		18148	18948	12189	12198	21050	21050					0.036681688566886805
ILWLLLGICR	10	Unmodified	_ILWLLLGICR_					0	0	0		ENST00000496800.5_1_2:220110721-220112335:+|nuORF;ENST00000475696.5_1_2:220110721-220112662:+|nuORF;ENSG00000115661|ENST00000396738|STK16	ENST00000496800.5_1_2:220110721-220112335:+|nuORF	ENST00000496800.5_1_2:220110721-220112335:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.5805358886719	3	400.582617	1198.72602	-1.7911	-0.00071747	-3.4428	-0.0013791	-5.2339	-0.0020966	400.5810817867452	112.19	0.31043	112.3	112.17	112.48	0.10638					41	11	4	0	0	0	0.86272	1	12105	12105		24.519	3.5723	1	8533200			18149	2865	12190	12199	21051	21051					0.13460678215437838
ILWRKTGT	8	Unmodified	_ILWRKTGT_					0	0	0		nc|ENSG00000136895|Q5VVW2-3|GARNL3;nc|ENSG00000136895|Q5VVW2-2|GARNL3;nc|ENSG00000136895|Q5VVW2-5|GARNL3;ENSG00000136895|ENST00000373387|GARNL3	nc|ENSG00000136895|Q5VVW2-3|GARNL3	nc|ENSG00000136895|Q5VVW2-3|GARNL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7905578613281	2	487.792727	973.5709	-1.3135	-0.00064074	-3.0168	-0.0014716	-4.3304	-0.0021123	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.88915	2	8514	8514;8586		40.573	8.6178	1	2239000			18150	4154	12191	12200	21052;21053	21052					0.08305770405377189
ILWRKTGT	8	Unmodified	_ILWRKTGT_					0	0	0		nc|ENSG00000136895|Q5VVW2-3|GARNL3;nc|ENSG00000136895|Q5VVW2-2|GARNL3;nc|ENSG00000136895|Q5VVW2-5|GARNL3;ENSG00000136895|ENST00000373387|GARNL3	nc|ENSG00000136895|Q5VVW2-3|GARNL3	nc|ENSG00000136895|Q5VVW2-3|GARNL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79058837890625	2	487.792727	973.5709	-1.5393	-0.00075085	-2.8027	-0.0013671	-4.342	-0.002118	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.86791	1	8211	8211		28.254	1.4582	1	1760400			18151	4154	12191	12200	21054	21054					0.08305770405377189
ILWRLEAAGY	10	Unmodified	_ILWRLEAAGY_					0	0	0			REV__ENSG00000176928|ENST00000652361|GCNT4	REV__ENSG00000176928|ENST00000652361|GCNT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.3326416015625	2	596.329673	1190.64479	0.92115	0.00054931	4.4733	0.0026676	5.3945	0.0032169	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.86763	1	9986	9986		26.693	0.62953	1	1402200	+		18152	22161	12192	12201	21055	21055					0.05709693777043867
ILWRQAAS	8	Unmodified	_ILWRQAAS_					0	0	0		nc|ENSG00000120498|Q8IYF3-2|TEX11;ENSG00000120498|ENST00000374333|TEX11;nc|ENSG00000120498|Q8IYF3|TEX11	nc|ENSG00000120498|Q8IYF3-2|TEX11	nc|ENSG00000120498|Q8IYF3-2|TEX11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7683410644531	2	472.769252	943.52395	-1.1355	-0.00053681	-3.1204	-0.0014752	-4.2559	-0.002012	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.86288	1	8107	8107		26.796	1.222	1	292450			18153	3132	12193	12202	21056	21056					0.04992910854218735
ILWRVLRPECL	11	Unmodified	_ILWRVLRPECL_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000529821.5_1_11:6587803-6593213:+|nuORF;ENST00000530197.5_1_11:6587352-6593213:+|nuORF;ENST00000533635.5_1_11:6587803-6591461:+|nuORF;ENST00000525883.5_1_11:6587352-6591461:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000533635.5_1_11:6587803-6591461:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.6082458496094	3	466.607713	1396.80131	-0.99183	-0.00046279	1.735	0.00080959	0.74322	0.00034679	466.6084303998886	100.17	2.2081	100.39	99.16	101.37	0.21511					171	52	4	0	0	0	0.732	1	10472	10472		26.063	0.9374	1	609920			18154	7276;13244	12194	12203	21057	21057					0.11878235675885662
ILWSILIYSVF	11	Unmodified	_ILWSILIYSVF_					0	0	0			REV__ENSG00000136546|ENST00000643258|SCN7A	REV__ENSG00000136546|ENST00000643258|SCN7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.93267822265625	3	451.93208	1352.77441	1.2214	0.000552	0.076618	3.4626E-05	1.298	0.00058663	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.69931	1	10849	10849		31.634	2.0835	1	1043200	+		18155	19320	12195	12204	21058	21058					0.11213450336299502
ILWSILIYSVF	11	Unmodified	_ILWSILIYSVF_					0	0	0			REV__ENSG00000136546|ENST00000643258|SCN7A	REV__ENSG00000136546|ENST00000643258|SCN7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9328918457031	3	451.93208	1352.77441	-1.2099	-0.00054677	2.5521	0.0011534	1.3422	0.00060658	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.73621	1	10522	10522		25.126	5.4991	1	1176100	+		18156	19320	12195	12204	21059	21059					0.11213450336299502
ILWSILIYSVF	11	Unmodified	_ILWSILIYSVF_					0	0	0			REV__ENSG00000136546|ENST00000643258|SCN7A	REV__ENSG00000136546|ENST00000643258|SCN7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9326477050781	3	451.93208	1352.77441	-1.7713	-0.0008005	3.1406	0.0014193	1.3693	0.00061882	451.93340802352935	100.57	2.3737	100.74	99.884	102.26	0.17199					164	56	4	0	0	0	0.74022	1	10485	10485		24.232	7.0651	1	618930	+		18157	19320	12195	12204	21060	21060					0.11213450336299502
ILWSSEEVK	9	Unmodified	_ILWSSEEVK_					0	0	0			REV__ENSG00000090273|ENST00000321265|NUDC	REV__ENSG00000090273|ENST00000321265|NUDC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3168334960938	2	545.792589	1089.57063	2.426	0.0013241	4.3589	0.0023791	6.785	0.0037032	545.7949472518254	92.531	2.5721	92.467	91.439	94.011	-0.064148					90	60	2	0	0	0	0.20789	1	9925	9925		34.173	9.6534	1	132430	+		18158	16983	12196	12205	21061	21061					0.029423058948623293
ILWVLLCA	8	Unmodified	_ILWVLLCA_					0	0	0		ENST00000397898.7_1_21:46226554-46226644:-|nuORF	ENST00000397898.7_1_21:46226554-46226644:-|nuORF	ENST00000397898.7_1_21:46226554-46226644:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7770690917969	2	465.777699	929.540846	-1.4399	-0.00067067	1.1277	0.00052527	-0.31216	-0.0001454	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.84567	1	7548	7548		24.504	0	1	287800			18159	11166	12197	12206	21062	21062					0.07325695415806877
ILYDDKEQ	8	Unmodified	_ILYDDKEQ_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2534790039062	2	512.253297	1022.49204	-0.40094	-0.00020538	1.3932	0.00071366	0.99223	0.00050827	512.253883322564	54.419	1.295	54.474	54.011	55.305	0.055614					87	42	3	0	0	0	0.90465	1	4502	4502		40.573	0	1	718970			18160	7954	12198	12207	21063	21063					-0.018305464102354563
ILYEILLGK	9	Unmodified	_ILYEILLGK_					0	0	0		nc|ENSG00000211751|P01850|TRBC1;nc|ENSG00000211772|A0A5B9|TRBC2	nc|ENSG00000211751|P01850|TRBC1	nc|ENSG00000211751|P01850|TRBC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3338623046875	2	531.333893	1060.65323	0.60185	0.00031978	-0.57578	-0.00030593	0.026065	1.3849E-05	531.3334748981565	77.492	1.9296	77.897	77.547	79.477	0.40531					108	45	4	0	0	0	0.0080651	7	8822	8799;8810;8822;8834;8846;8858;8872		134.81	55.36	1	5041200			18161	15234	12199	12208	21064;21065;21066;21067;21068;21069;21070	21066					0.12533247693681915
ILYEILLGK	9	Unmodified	_ILYEILLGK_					0	0	0		nc|ENSG00000211751|P01850|TRBC1;nc|ENSG00000211772|A0A5B9|TRBC2	nc|ENSG00000211751|P01850|TRBC1	nc|ENSG00000211751|P01850|TRBC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3336791992188	2	531.333893	1060.65323	-0.1228	-6.5247E-05	0.10887	5.7847E-05	-0.013927	-7.4001E-06	531.3338382226597	77.417	1.4657	77.986	77.618	79.084	0.56835					99	34	4	0	0	0	0.044173	8	8830	8810;8819;8830;8849;8861;8874;8887;8906		110.12	46.814	1	5723900			18162	15234	12199	12208	21071;21072;21073;21074;21075;21076;21077;21078	21073					0.12533247693681915
ILYFLLRVP	9	Unmodified	_ILYFLLRVP_					0	0	0		ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3302001953125	2	567.357702	1132.70085	-1.3958	-0.00079189	-0.53555	-0.00030385	-1.9313	-0.0010957	567.3566750734573	91.773	0.30234	91.959	91.7	92.003	0.18582					8	6	2	0	0	0	0.20789	1	9190	9190		20.482	4.0087	1	47149			18163	7861	12200	12209	21079	21079					0.13980946684523587
ILYGGVVL	8	Unmodified	_ILYGGVVL_					0	0	0			REV__ENST00000319715.8_2_16:24551743-24551818:+|nuORF	REV__ENST00000319715.8_2_16:24551743-24551818:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2583923339844	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.80127	1	579	579		16.705	0	1	679020	+		18164	24991	12201	12210	21080	21080					0.08288775879520927
ILYGGVVL	8	Unmodified	_ILYGGVVL_					0	0	0			REV__ENST00000319715.8_2_16:24551743-24551818:+|nuORF	REV__ENST00000319715.8_2_16:24551743-24551818:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2580871582031	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.84567	1	584	584		24.504	0	1	817900	+		18165	24991	12201	12210	21081	21081					0.08288775879520927
ILYILVFPSL	10	Unmodified	_ILYILVFPSL_					0	0	0			REV__ENST00000413366.7_1_17:64800791-64801205:+|nuORF	REV__ENST00000413366.7_1_17:64800791-64801205:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3429565429688	2	589.365193	1176.71583	-1.324	-0.00078034	2.5323	0.0014925	1.2083	0.00071212	589.3668122864465	94.656	0.33581	94.858	94.609	94.944	0.20242					9	7	2	0	0	0	0.37624	1	9602	9602		29.15	23.592	1	58621	+		18166	26391	12202	12211	21082	21082					0.13454393761844585
ILYILVFPSL	10	Unmodified	_ILYILVFPSL_					0	0	0			REV__ENST00000413366.7_1_17:64800791-64801205:+|nuORF	REV__ENST00000413366.7_1_17:64800791-64801205:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3426513671875	2	589.365193	1176.71583	0.21617	0.0001274	3.2683	0.0019262	3.4844	0.0020536	589.3658310848034	94.736	0.12714	95.156	95.061	95.189	0.41963					6	2	3	0	0	0	0.37624	1	11358	11358		20.947	0	1	44319	+		18167	26391	12202	12211	21083	21083					0.13454393761844585
ILYLEKLKDS	10	Unmodified	_ILYLEKLKDS_					0	0	0		L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3507690429688	2	611.358096	1220.70164	-0.40504	-0.00024762	-2.2662	-0.0013854	-2.6712	-0.0016331	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.86218	1	10253	10253		32.812	4.9302	1	12417000			18168	14560	12203	12212	21084	21084					0.1001169654291516
ILYLEKLKDS	10	Unmodified	_ILYLEKLKDS_					0	0	0		L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3546752929688	2	611.358096	1220.70164	0.21558	0.0001318	-3.6738	-0.002246	-3.4582	-0.0021142	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.6116	1	9905	9905		49.442	6.5773	1	5379900			18169	14560	12203	12212	21085	21085					0.1001169654291516
ILYLEKLKDS	10	Unmodified	_ILYLEKLKDS_					0	0	0		L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.35498046875	2	611.358096	1220.70164	0.85002	0.00051967	-4.3059	-0.0026324	-3.4558	-0.0021128	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.77314	1	9705	9705		40.778	7.9657	1	6836400			18170	14560	12203	12212	21086	21086					0.1001169654291516
ILYLEKLKDS	10	Unmodified	_ILYLEKLKDS_					0	0	0		L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|154|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.3538818359375	2	611.358096	1220.70164	0.93149	0.00056947	-3.3536	-0.0020503	-2.4222	-0.0014808	611.3560842580883	95.783	3.9941	96.187	95.298	99.293	0.40451					337	97	4	0	0	0	0.8608	1	11550	11550		34.173	5.0025	1	11629000			18171	14560	12203	12212	21087	21087					0.1001169654291516
ILYLLKIFLK	10	Unmodified	_ILYLLKIFLK_					0	0	0		chr12:66028699-66038559|19|11.21|0.0|11.73|-|1|TE_info:L1MEc,L1MEc_dup13679,L1,LINE,donor,-,66038559,66039154|LINC02425,None|11	chr12:66028699-66038559|19|11.21|0.0|11.73|-|1|TE_info:L1MEc,L1MEc_dup13679,L1,LINE,donor,-,66038559,66039154|LINC02425,None|11	chr12:66028699-66038559|19|11.21|0.0|11.73|-|1|TE_info:L1MEc,L1MEc_dup13679,L1,LINE,donor,-,66038559,66039154|LINC02425,None|11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	632.4310913085938	2	632.425585	1262.83662	2.8292	0.0017893	4.0853	0.0025837	6.9145	0.0043729	632.4278485771309	108.34	0.724	108.31	108	108.72	-0.031487					56	31	3	0	0	0	0.88541	1	12008	12008		11.511	0.64546	1	2849900			18172	141	12204	12213	21088	21088					0.21571221475278435
ILYLLLTY	8	Unmodified	_ILYLLLTY_					0	0	0			REV__ENST00000346329.7_1_11:70281328-70281493:+|nuORF	REV__ENST00000346329.7_1_11:70281328-70281493:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3082580566406	2	506.309887	1010.60522	0.46798	0.00023695	-1.9518	-0.00098823	-1.4838	-0.00075129	506.3090292156969	63.021	1.2614	63.143	62.591	63.852	0.12252					86	56	2	0	0	0	0.82464	1	5493	5493		21.702	0.7554	1	130540	+		18173	25319	12205	12214	21089	21089					0.10034173773601651
ILYLSFLLK	9	Unmodified	_ILYLSFLLK_					0	0	0		ENST00000588106.1_1_17:67246040-67246830:-|nuORF	ENST00000588106.1_1_17:67246040-67246830:-|nuORF	ENST00000588106.1_1_17:67246040-67246830:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.353271484375	2	555.352086	1108.68962	0.32258	0.00017915	1.7033	0.00094593	2.0259	0.0011251	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.7932	1	10499	10499		18.324	0.95945	1	7708500			18174	14208	12206	12215	21090	21090					0.13962124590375424
ILYLVPLL	8	Unmodified	_ILYLVPLL_					0	0	0		ENSG00000104290|ENST00000240093|FZD3	ENSG00000104290|ENST00000240093|FZD3	ENSG00000104290|ENST00000240093|FZD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.3135070800781	2	472.314972	942.615391	-0.56246	-0.00026566	-3.6751	-0.0017358	-4.2375	-0.0020014	472.31308073619675	63.85	1.3072	64.404	63.961	65.268	0.55449					80	30	4	0	0	0	0.70106	1	6972	6972		67.327	9.0973	1	1342600			18175	2122	12207	12216	21091	21091					0.14178781498856097
ILYQRDKHL	9	Unmodified	_ILYQRDKHL_					0	0	0		ENST00000376673.7_1_13:98009748-98017404:+|nuORF	ENST00000376673.7_1_13:98009748-98017404:+|nuORF	ENST00000376673.7_1_13:98009748-98017404:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	593.3438110351562	2	593.340572	1184.66659	3.3538	0.0019899	2.9688	0.0017615	6.3226	0.0037515	593.3422294286001	103.53	2.4934	103.48	103.12	105.61	-0.043755					162	59	4	0	0	0	0.77546	1	11406	11406		31.955	0.42505	1	2080000			18176	10821	12208	12217	21092	21092					0.08164498525616182
ILYQWRQRRKL	11	Unmodified	_ILYQWRQRRKL_					0	0	0		ENSG00000167595|ENST00000646935|PROSER3;nc|ENSG00000167595|Q2NL68|PROSER3;nc|ENSG00000167595|Q2NL68-2|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	520.9849853515625	3	520.64756	1558.92085	-0.042901	-2.2336E-05	4.3328	0.0022559	4.2899	0.0022335	520.9841774153862	108.42	1.2085	108.38	108.01	109.22	-0.042404					82	50	2	0	0	0	0.80813	3	11782	11782;11811;11858		9.6461	0.65857	1	1349000			18177	6303	12209	12218	21093;21094;21095	21093					0.1637456534474495
ILYQWRQRRKL	11	Unmodified	_ILYQWRQRRKL_					0	0	0		ENSG00000167595|ENST00000646935|PROSER3;nc|ENSG00000167595|Q2NL68|PROSER3;nc|ENSG00000167595|Q2NL68-2|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	520.6503295898438	3	520.64756	1558.92085	3.1721	0.0016515	0.4619	0.00024049	3.634	0.001892	520.6477103529944	107.89	0.25912	107.86	107.68	107.94	-0.031487					30	6	6	0	0	0	0.78683	2	11968	11968;11980		14.086	3.0878	1	175230000			18178	6303	12209	12218	21096;21097	21096					0.1637456534474495
ILYQWRQRRKL	11	Unmodified	_ILYQWRQRRKL_					0	0	0		ENSG00000167595|ENST00000646935|PROSER3;nc|ENSG00000167595|Q2NL68|PROSER3;nc|ENSG00000167595|Q2NL68-2|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	520.6505737304688	3	520.64756	1558.92085	3.1686	0.0016497	0.032204	1.6767E-05	3.2008	0.0016665	520.6472670578918	108.08	0.1031	108.05	108	108.1	-0.031487					5	3	2	0	0	0	0.8398	1	11992	11992		6.6596	0.65857	1	1412700			18179	6303	12209	12218	21098	21098					0.1637456534474495
ILYQWRQRRKL	11	Unmodified	_ILYQWRQRRKL_					0	0	0		ENSG00000167595|ENST00000646935|PROSER3;nc|ENSG00000167595|Q2NL68|PROSER3;nc|ENSG00000167595|Q2NL68-2|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	520.649658203125	3	520.64756	1558.92085	3.1688	0.0016498	1.2831	0.00066805	4.4519	0.0023179	520.6481229759471	112.87	7.7849	112.84	112.19	119.97	-0.024811					546	277	2	0	0	0	0.78683	1	12412	12412		14.086	7.7651	1	2403200			18180	6303	12209	12218	21099	21099					0.1637456534474495
ILYQWRQRRKL	11	Unmodified	_ILYQWRQRRKL_					0	0	0		ENSG00000167595|ENST00000646935|PROSER3;nc|ENSG00000167595|Q2NL68|PROSER3;nc|ENSG00000167595|Q2NL68-2|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.9847412109375	3	520.64756	1558.92085	2.4567	0.0012791	1.4329	0.00074604	3.8896	0.0020251	520.9827067750012	107.86	0.20274	107.95	107.81	108.01	0.084457					14	5	3	0	0	0	0.84494	1	13160	13160		6.3209	0.31984	1	9899500			18181	6303	12209	12218	21100	21100					0.1637456534474495
ILYQWRQRRKL	11	Unmodified	_ILYQWRQRRKL_					0	0	0		ENSG00000167595|ENST00000646935|PROSER3;nc|ENSG00000167595|Q2NL68|PROSER3;nc|ENSG00000167595|Q2NL68-2|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.9841918945312	3	520.64756	1558.92085	4.8334	0.0025165	-0.68266	-0.00035542	4.1507	0.0021611	520.6471809127021	107.86	0.19365	107.97	107.84	108.04	0.11715					14	5	4	0	0	0	0.84494	1	13196	13196		6.3209	0	1	9250700			18182	6303	12209	12218	21101	21101					0.1637456534474495
ILYQWRQRRKL	11	Unmodified	_ILYQWRQRRKL_					0	0	0		ENSG00000167595|ENST00000646935|PROSER3;nc|ENSG00000167595|Q2NL68|PROSER3;nc|ENSG00000167595|Q2NL68-2|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	520.64756	1558.92085	1.2129	0.0006315	3.3283	0.0017329	4.5412	0.0023644	520.9836555896236	112.84	1.623	112.86	112.69	114.31	0.028854	0.22611	0.0014348	NaN	14.086	94	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2065600			18183	6303	12209	12218							0.1637456534474495
ILYQWRQRRKL	11	Unmodified	_ILYQWRQRRKL_					0	0	0		ENSG00000167595|ENST00000646935|PROSER3;nc|ENSG00000167595|Q2NL68|PROSER3;nc|ENSG00000167595|Q2NL68-2|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	520.64756	1558.92085	-0.19389	-0.00010095	5.6764	0.0029554	5.4825	0.0028544	520.6499706124238	112.36	0.11005	112.47	112.4	112.51	0.10638	-0.17145	0.0051023	NaN	14.086	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153920			18184	6303	12209	12218							0.1637456534474495
ILYQWRQRRKL	11	Unmodified	_ILYQWRQRRKL_					0	0	0		ENSG00000167595|ENST00000646935|PROSER3;nc|ENSG00000167595|Q2NL68|PROSER3;nc|ENSG00000167595|Q2NL68-2|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	ENSG00000167595|ENST00000646935|PROSER3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	520.64756	1558.92085	-1.5478	-0.00080584	6.0746	0.0031627	4.5269	0.0023569	520.6506412647275	112.41	0.71533	112.38	112.25	112.96	-0.032333	-0.25823	0.0057244	NaN	14.086	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	379280			18185	6303	12209	12218							0.1637456534474495
ILYRLKERFQL	11	Unmodified	_ILYRLKERFQL_					0	0	0		ENST00000551219.5_1_12:71092119-71148195:-|nuORF;ENST00000548220.1_1_12:71054984-71148538:-|nuORF;nc|ENSG00000153233|Q15256-3|PTPRR;nc|ENSG00000153233|Q15256-4|PTPRR;nc|ENSG00000153233|Q15256-5|PTPRR;ENSG00000153233|ENST00000283228|PTPRR	ENST00000551219.5_1_12:71092119-71148195:-|nuORF	ENST00000551219.5_1_12:71092119-71148195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.6357421875	3	493.632916	1477.87692	0.075189	3.7116E-05	2.9236	0.0014432	2.9987	0.0014803	493.6344097287456	16.72	0.30251	16.779	16.656	16.959	0.059267					24	14	3	0	0	0	0.79224	1	182	182		12.957	2.8536	1	86691			18186	5224	12210	12219	21102	21102					0.15709536127769752
ILYRLKERFQL	11	Unmodified	_ILYRLKERFQL_					0	0	0		ENST00000551219.5_1_12:71092119-71148195:-|nuORF;ENST00000548220.1_1_12:71054984-71148538:-|nuORF;nc|ENSG00000153233|Q15256-3|PTPRR;nc|ENSG00000153233|Q15256-4|PTPRR;nc|ENSG00000153233|Q15256-5|PTPRR;ENSG00000153233|ENST00000283228|PTPRR	ENST00000551219.5_1_12:71092119-71148195:-|nuORF	ENST00000551219.5_1_12:71092119-71148195:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	493.632916	1477.87692	-0.73981	-0.00036519	3.251	0.0016048	2.5112	0.0012396	493.63475206477744	16.787	0.22107	16.833	16.726	16.947	0.0457	0.01218	0.00062225	NaN	12.957	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58781			18187	5224	12210	12219							0.15709536127769752
ILYRLKERFQL	11	Unmodified	_ILYRLKERFQL_					0	0	0		ENST00000551219.5_1_12:71092119-71148195:-|nuORF;ENST00000548220.1_1_12:71054984-71148538:-|nuORF;nc|ENSG00000153233|Q15256-3|PTPRR;nc|ENSG00000153233|Q15256-4|PTPRR;nc|ENSG00000153233|Q15256-5|PTPRR;ENSG00000153233|ENST00000283228|PTPRR	ENST00000551219.5_1_12:71092119-71148195:-|nuORF	ENST00000551219.5_1_12:71092119-71148195:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	493.632916	1477.87692	0.74942	0.00036994	2.0351	0.0010046	2.7845	0.0013745	493.6340393991593	16.874	0.21546	16.85	16.718	16.933	-0.024035	0.029303	-0.0011784	NaN	12.957	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89160			18188	5224	12210	12219							0.15709536127769752
ILYRPLRGKLD	11	Unmodified	_ILYRPLRGKLD_					0	0	0			REV__ENSG00000131748|ENST00000336308|STARD3	REV__ENSG00000131748|ENST00000336308|STARD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.609130859375	3	448.610111	1342.8085	0.51142	0.00022943	-2.2117	-0.00099217	-1.7002	-0.00076274	448.60891312566025	75.185	1.0571	75.23	74.705	75.762	0.04509					87	28	4	0	0	0	0.75121	1	7286	7286		21.78	3.9473	1	364530	+		18189	18962	12211	12220	21103	21103					0.15081291547926412
ILYWVGLLI	9	Unmodified	_ILYWVGLLI_					0	0	0			REV__ENSG00000104341|ENST00000521545|LAPTM4B	REV__ENSG00000104341|ENST00000521545|LAPTM4B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3170776367188	2	545.338978	1088.6634	0.15347	8.3692E-05	-0.12849	-7.0072E-05	0.024974	1.3619E-05	545.3405071227747	90.313	0.53627	90.526	90.169	90.705	0.21271					17	12	2	0	0	0	0.20789	1	9070	9070		39.021	9.18	1	70021	+		18190	17449	12212	12221	21104	21104					0.12261855418910272
IMAALEANP	9	Unmodified	_IMAALEANP_					0	0	0		ENSG00000004399|ENST00000324093|PLXND1;ENST00000504524.5_1_3:129275157-129277480:-|nuORF;ENST00000512744.5_2_3:129275157-129278574:-|nuORF	ENSG00000004399|ENST00000324093|PLXND1	ENSG00000004399|ENST00000324093|PLXND1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2252502441406	2	465.241678	928.468803	-0.43295	-0.00020142	-2.5974	-0.0012084	-3.0304	-0.0014099	465.2403006300369	79.141	0.72272	79.552	79.184	79.907	0.4106					30	16	3	0	0	0	0.20789	1	9064	9064		47.916	5.5195	1	155430			18191	660	12213	12222	21105	21105					0.0017073627144554848
IMAARADPED	10	Unmodified	_IMAARADPED_					0	0	0			REV__nc|ENSG00000006125|P63010-3|AP2B1	REV__nc|ENSG00000006125|P63010-3|AP2B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.7576904296875	2	544.755681	1087.49681	0.53707	0.00029257	3.0361	0.0016539	3.5731	0.0019465	544.7572531187953	56.838	0.3177	56.81	56.645	56.963	-0.02866					16	10	2	0	0	0	0.77314	1	5215	5215		40.778	0.20554	1	144910	+		18192	16098	12214	12223	21106	21106					-0.04343985539117057
IMAARADPED	10	Unmodified	_IMAARADPED_					0	0	0			REV__nc|ENSG00000006125|P63010-3|AP2B1	REV__nc|ENSG00000006125|P63010-3|AP2B1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	544.755681	1087.49681	0.53707	0.00029257	3.0361	0.0016539	3.5731	0.0019465	544.7572531187953	56.838	0.3177	56.81	56.645	56.963	-0.02866	-0.0093513	-0.0007334	NaN	40.778	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144910	+		18193	16098	12214	12223							-0.04343985539117057
IMAARADPED	10	Unmodified	_IMAARADPED_					0	0	0			REV__nc|ENSG00000006125|P63010-3|AP2B1	REV__nc|ENSG00000006125|P63010-3|AP2B1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	544.755681	1087.49681	-0.1558	-8.4874E-05	4.0239	0.002192	3.8681	0.0021072	544.7580004605101	56.795	0.42881	56.828	56.648	57.077	0.033184	0.0093513	0.00034285	NaN	40.778	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161420	+		18194	16098	12214	12223							-0.04343985539117057
IMACFIFSL	9	Unmodified	_IMACFIFSL_					0	0	0		ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.303466796875	2	522.766474	1043.5184	-0.9989	-0.00052219	4.4907	0.0023476	3.4918	0.0018254	523.2703939988966	88.267	0.11658	88.73	88.634	88.75	0.46312					4	2	2	0	0	0	0.20789	1	10426	10426		25.45	0	1	41926			18195	6969	12215	12224	21107	21107					-0.0016227204412189167
IMALLICPL	9	Unmodified	_IMALLICPL_					0	0	0		ENST00000315684.12_2_17:8131156-8131411:-|nuORF	ENST00000315684.12_2_17:8131156-8131411:-|nuORF	ENST00000315684.12_2_17:8131156-8131411:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7920227050781	2	493.792492	985.570431	-1.0082	-0.00049786	0.11434	5.6459E-05	-0.8939	-0.0004414	493.79239689427686	91.796	2.3688	92.259	91.807	94.176	0.46249					119	55	4	0	0	0	0.72098	1	10985	10985		39.021	0	1	3049900			18196	9979	12216	12225	21108	21108					0.07706891369650748
IMAVLSLPN	9	Unmodified	_IMAVLSLPN_					0	0	0		ENSG00000138271|ENST00000260843|GPR87	ENSG00000138271|ENST00000260843|GPR87	ENSG00000138271|ENST00000260843|GPR87	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27740478515625	2	479.275521	956.536489	0.53004	0.00025403	3.2196	0.0015431	3.7496	0.0017971	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.58668	1	8367	8367		47.657	1.7054	1	2070000			18197	4284	12217	12226	21109	21109					0.0564818620226788
IMAVRIVR	8	Unmodified	_IMAVRIVR_					0	0	0		ENSG00000188739|ENST00000408888|RBM34;ENST00000495224.1_1_1:235295030-235299397:-|nuORF	ENSG00000188739|ENST00000408888|RBM34	ENSG00000188739|ENST00000408888|RBM34	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2773742675781	2	479.304947	956.595341	0.62964	0.00030179	1.0231	0.00049037	1.6527	0.00079215	479.30610548124884	83.901	0.29793	84.049	83.788	84.086	0.14793					9	6	2	0	0	0	0.4196	1	8139	8139		14.664	3.7985	1	46915			18198	7955	12218	12227	21110	21110					0.11530707287249697
IMEFGGNVTLH	11	Unmodified	_IMEFGGNVTLH_					0	0	0		ENSG00000172680|ENST00000311923|MOS	ENSG00000172680|ENST00000311923|MOS	ENSG00000172680|ENST00000311923|MOS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.5389709472656	3	406.537624	1216.59104	2.5998	0.0010569	0.94822	0.00038549	3.548	0.0014424	406.5379245246649	30.675	0.89445	30.664	30.372	31.266	-0.010656					61	22	4	0	0	0	0.69687	1	1641	1641		32.034	2.4834	1	291610			18199	6783	12219	12228	21111	21111					-0.008588467169602154
IMGIGHRV	8	Unmodified	_IMGIGHRV_					0	0	0		nc|ENSG00000131473|P53396-3|ACLY;nc|ENSG00000131473|P53396-2|ACLY;ENSG00000131473|ENST00000352035|ACLY	nc|ENSG00000131473|P53396-3|ACLY	nc|ENSG00000131473|P53396-3|ACLY	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.785888671875	2	441.752547	881.490542	-2.4426	-0.001079	-0.20916	-9.2396E-05	-2.6518	-0.0011714	441.75212297860435	40.642	0.16349	41.034	40.968	41.131	0.39209					5	4	2	0	0	0	0.4196	1	3487	3487		7.6903	0	1	300060			18200	3734	12220	12229	21112	21112					0.04505585810682078
IMIVTLPGAS	10	Unmodified	_IMIVTLPGAS_					0	0	0		ENSG00000162654|ENST00000355754|GBP4	ENSG00000162654|ENST00000355754|GBP4	ENSG00000162654|ENST00000355754|GBP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29071044921875	2	501.288628	1000.5627	1.1291	0.00056599	2.4986	0.0012525	3.6277	0.0018185	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.85934	1	8836	8836		35.618	0	1	9883700			18201	5714	12221	12230	21113	21113					0.06244455373735036
IMKAWFYI	8	Unmodified	_IMKAWFYI_					0	0	0		ENSG00000186787|ENST00000434397|SPIN2B;ENSG00000147059|ENST00000374906|SPIN2A	ENSG00000186787|ENST00000434397|SPIN2B	ENSG00000186787|ENST00000434397|SPIN2B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.8141479492188	2	536.288431	1070.56231	-0.10088	-5.41E-05	0.53918	0.00028916	0.4383	0.00023506	536.2884794371549	99.269	0.12267	99.319	99.233	99.355	0.04982					4	2	2	0	0	0	0.4196	1	10525	10525		20.482	0	1	28599			18202	4877	12222	12231	21114	21114					0.029850804445231915
IMKFHVAKRK	10	Unmodified	_IMKFHVAKRK_					0	0	0		nc|ENSG00000185760|Q9NR82-5|KCNQ5;nc|ENSG00000185760|Q9NR82-2|KCNQ5;chr6:73120577-73133421|16|49.25|0.96|5.68|+|ENST00000629977|KCNQ5,KCNQ5;ENSG00000185760|ENST00000370398|KCNQ5;nc|ENSG00000185760|Q9NR82-7|KCNQ5;nc|ENSG00000185760|Q9NR82-3|KCNQ5;nc|ENSG00000185760|Q9NR82-6|KCNQ5	nc|ENSG00000185760|Q9NR82-5|KCNQ5	nc|ENSG00000185760|Q9NR82-5|KCNQ5	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	629.3829345703125	2	629.38426	1256.75397	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.03	1	111.03	110.53	111.53	0								0	0	0	0.45132	1	11547	11547		26.693	1.5669	1				18203	483	12223	12232	21115	21115					0.13586001195494646
IMKQKQKFV	9	Unmodified	_IMKQKQKFV_					0	0	0		nc|ENSG00000105053|Q8IV63-3|VRK3;ENSG00000105053|ENST00000316763|VRK3	nc|ENSG00000105053|Q8IV63-3|VRK3	nc|ENSG00000105053|Q8IV63-3|VRK3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.3453369140625	2	575.344269	1148.67399	-0.3799	-0.00021857	2.9725	0.0017102	2.5926	0.0014917	575.3459117588899	98.957	2.3582	98.957	98.457	100.82	0					160	56	5	0	0	0	0.7932	1	10058	10058		18.324	0.8564	1	2637800			18204	2181	12224	12233	21116	21116					0.10559514801661862
IMKRAKPI	8	Unmodified	_IMKRAKPI_					0	0	0			REV__ENSG00000137501|ENST00000359152|SYTL2	REV__ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8040466308594	2	478.807322	955.600092	-1.7281	-0.00082743	-1.5753	-0.00075426	-3.3034	-0.0015817	478.806439205216	41.295	1.2034	41.295	40.815	42.018	0					75	35	3	0	0	0	0.80706	2	2730	2730;2749		20.482	1.1219	1	280900	+		18205	19388	12225	12234	21117;21118	21117					0.12051591429997188
IMKSKLPAS	9	Unmodified	_IMKSKLPAS_					0	0	0			REV__ENST00000530945.1_1_11:65623104-65623215:-|nuORF	REV__ENST00000530945.1_1_11:65623104-65623215:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.791015625	2	487.788795	973.563038	-0.085708	-4.1808E-05	3.6076	0.0017597	3.5219	0.0017179	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.69624	1	8203	8203		40.778	12.896	1	514950	+		18206	21182	12226	12235	21119	21119					0.07519875093578321
IMKTWVTPIF	10	Unmodified	_IMKTWVTPIF_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.3458862304688	2	618.346477	1234.6784	0.55169	0.00034113	-1.48	-0.00091518	-0.92836	-0.00057405	618.3454418699644	97.724	3.0702	97.772	96.827	99.897	0.048157					199	71	4	0	0	0	0.80179	1	10524	10524		39.253	1.4413	1	831610			18207	720	12227	12236	21120	21120					0.07044979224565395
IMLAGAVPK	9	Unmodified	_IMLAGAVPK_					0	0	0			REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.27435302734375	2	450.272781	898.531009	0.70497	0.00031743	3.7194	0.0016747	4.4244	0.0019922	450.274392035395	95.119	1.9705	95.282	94.908	96.878	0.16307					118	46	3	0	0	0	0.7932	1	9797	9797		18.324	2.6882	1	967700	+		18208	20694	12228	12237	21121	21121					0.07768507410446546
IMLGGLLASTG	11	Unmodified	_IMLGGLLASTG_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7932739257812	2	516.791535	1031.56852	0.82179	0.0004247	2.9641	0.0015318	3.7859	0.0019565	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.63176	1	9105	9105		40.778	1.972	1	858640			18209	5200	12229	12238	21122	21122					0.05399553885399655
IMLLINSLRRH	11	Unmodified	_IMLLINSLRRH_					0	0	0		ENSG00000221855|ENST00000408916|TAS2R41	ENSG00000221855|ENST00000408916|TAS2R41	ENSG00000221855|ENST00000408916|TAS2R41	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.9427185058594	3	455.943096	1364.80746	0.061334	2.7965E-05	-0.73297	-0.00033419	-0.67164	-0.00030623	455.9427266737859	65.278	1.9005	65.83	64.001	65.902	0.5526					80	46	2	0	0	0	0.61907	1	7056	7056		42.243	11.174	1	842270			18210	8673	12230	12239	21123	21123					0.13964753907362137
IMLRKRAVIEW	11	Unmodified	_IMLRKRAVIEW_					0	0	0			REV__ENST00000378180.8_1_13:50678890-50679094:+|nuORF	REV__ENST00000378180.8_1_13:50678890-50679094:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28326416015625	3	472.28323	1413.82786	-0.026913	-1.271E-05	-0.88478	-0.00041787	-0.9117	-0.00043058	472.28222422819385	101.61	1.7417	101.65	101.14	102.88	0.044815					90	41	4	0	0	0	0.78683	1	10946	10946		14.086	0	1	267120	+		18211	25889	12231	12240	21124	21124					0.1374992456721884
IMMEDIFYT	9	2 Oxidation (M)	_IM(Oxidation (M))M(Oxidation (M))EDIFYT_		IM(1)M(1)EDIFYT		IM(53)M(53)EDIFYT	0	0	2		ENST00000358154.7_1_16:21666912-21667038:+|nuORF	ENST00000358154.7_1_16:21666912-21667038:+|nuORF	ENST00000358154.7_1_16:21666912-21667038:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.7545166015625	2	597.756501	1193.49845	-0.28658	-0.0001713	-2.6399	-0.001578	-2.9265	-0.0017493	597.7549277115289	73.862	1.0699	74.25	74.041	75.11	0.38779					46	25	3	0	0	0	0.47272	1	8323	8323		53.351	16.192	1	1089800			18212	10404	12232	12241	21125	21125		170;171			-0.0905611256539487
IMMGKKDL	8	Unmodified	_IMMGKKDL_					0	0	0			REV__nc|ENSG00000102786|Q9UL03-3|INTS6	REV__nc|ENSG00000102786|Q9UL03-3|INTS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.25537109375	2	468.256274	934.497995	-0.24701	-0.00011566	-2.829	-0.0013247	-3.076	-0.0014404	468.25479155810393	81.956	2.8945	82.014	80.909	83.803	0.057808					126	66	2	0	0	0	0.89457	1	8140	8140		37.028	1.8278	1	193290	+		18213	17356	12233	12242	21126	21126					0.028125572960789214
IMNRTYWICPF	11	Carbamidomethyl (C)	_IMNRTYWIC(Carbamidomethyl (C))PF_	IMNRTYWIC(1)PF		IMNRTYWIC(52)PF		0	1	0			REV__ENSG00000165923|ENST00000525123|AGBL2	REV__ENSG00000165923|ENST00000525123|AGBL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.9102478027344	3	500.909064	1499.70536	-0.21664	-0.00010852	2.1373	0.0010706	1.9207	0.00096208	500.910022560047	64.98	1.0359	64.945	64.44	65.476	-0.034798					137	37	5	0	0	0	0.50531	1	6188	6188		51.528	14.02	1	1951400	+		18214	21235	12234	12243	21127	21127	261				-0.024502802265487844
IMNSCLWD	8	Unmodified	_IMNSCLWD_					0	0	0		ENSG00000179715|ENST00000546455|PCED1B	ENSG00000179715|ENST00000546455|PCED1B	ENSG00000179715|ENST00000546455|PCED1B	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.28802490234375	2	491.212063	980.409574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.007	1	56.071	55.571	56.571	0.063725								0	0	0	0.29703	1	4713	4713		37.159	3.6435	1				18215	7290	12235	12244	21128	21128					-0.08141483014401274
IMPEEEYS	8	Unmodified	_IMPEEEYS_					0	0	0		ENSG00000145715|ENST00000274376|RASA1;ENST00000515800.6_1_5:86667940-86686697:+|nuORF;nc|ENSG00000145715|P20936-2|RASA1;nc|ENSG00000145715|P20936-4|RASA1	ENSG00000145715|ENST00000274376|RASA1	ENSG00000145715|ENST00000274376|RASA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.2137145996094	2	499.212783	996.411013	1.0527	0.0005255	0.44418	0.00022174	1.4968	0.00074724	499.21278570860323	100.31	0.83669	100.65	100.37	101.2	0.33295					36	20	3	0	0	0	0.93529	1	12140	12140		52.299	9.8247	1	250190			18216	4785	12236	12245	21129	21129					-0.08733570444633187
IMPQVSMKL	9	Unmodified	_IMPQVSMKL_					0	0	0			REV__ENST00000450070.1_1_20:37606642-37606831:-|nuORF	REV__ENST00000450070.1_1_20:37606642-37606831:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7898559570312	2	523.790481	1045.56641	0.76893	0.00040276	-1.5603	-0.00081728	-0.79139	-0.00041452	523.7895845560489	55.44	0.87277	55.841	55.446	56.319	0.40101					53	20	4	0	0	0	0.38563	1	5712	5712		58.782	4.0596	1	2415600	+		18217	26861	12237	12246	21130	21130					0.04544801875954363
IMQALWLYI	9	Unmodified	_IMQALWLYI_					0	0	0		nc|ENSG00000108604|Q92925-3|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;ENSG00000108604|ENST00000448276|SMARCD2	nc|ENSG00000108604|Q92925-3|SMARCD2	nc|ENSG00000108604|Q92925-3|SMARCD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.823486328125	2	575.820095	1149.62564	-1.4349	-0.00082625	3.0554	0.0017594	1.6205	0.00093313	575.8218620619822	61.574	0.85769	61.963	61.633	62.491	0.38845					39	19	3	0	0	0	0.69914	1	6564	6564		40.573	2.7611	1	241440			18218	2421	12238	12247	21131	21131					0.05681021161785793
IMQTVKGF	8	Unmodified	_IMQTVKGF_					0	0	0		ENSG00000146918|ENST00000356309|NCAPG2;nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000432615.5_1_7:158424360-158447416:-|nuORF;ENST00000467785.5_1_7:158424360-158447992:-|nuORF	ENSG00000146918|ENST00000356309|NCAPG2	ENSG00000146918|ENST00000356309|NCAPG2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	461.265380859375	2	462.254588	922.494624	-1.0599	-0.00048993	-2.2172	-0.0010249	-3.277	-0.0015148	462.25339679061085	93.377	0.94668	93.377	93.069	94.015	0					32	21	2	0	0	0	0.4196	1	9214	9214		18.324	0	1	143480			18219	4870	12239	12248	21132	21132					0.030276305137249437
IMRRFSLPG	9	Unmodified	_IMRRFSLPG_					0	0	0		nc|ENSG00000148459|Q5T2R2-3|PDSS1;ENSG00000148459|ENST00000376215|PDSS1;ENST00000491711.5_1_10:27029734-27035399:+|nuORF;ENST00000470978.1_1_10:27023607-27035399:+|nuORF	nc|ENSG00000148459|Q5T2R2-3|PDSS1	nc|ENSG00000148459|Q5T2R2-3|PDSS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8043212890625	2	538.805311	1075.59607	-1.7158	-0.0009245	4.273	0.0023023	2.5571	0.0013778	538.8077132058876	90.429	2.6922	90.899	89.762	92.454	0.47068					154	66	4	0	0	0	0.78536	1	10671	10671		29.15	1.2673	1	808590			18220	4963	12240	12249	21133	21133					0.061295019362887615
IMSTRGGF	8	Unmodified	_IMSTRGGF_					0	0	0			REV__ENST00000523167.1_1_8:101300446-101321650:-|nuORF	REV__ENST00000523167.1_1_8:101300446-101321650:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25311279296875	2	434.720913	867.427273	0.014789	6.4292E-06	0.76831	0.000334	0.7831	0.00034043	434.72119103333563	77.754	0.78477	78.159	77.72	78.505	0.4053					31	18	2	0	0	0	0.4196	1	8892	8892		11.511	0	1	115750	+		18221	28136	12241	12250	21134	21134					-0.011743996972199966
IMSYITAKNSI	11	Unmodified	_IMSYITAKNSI_					0	0	0		ENST00000485775.5_1_1:110582506-110596531:+|nuORF;nc|ENSG00000143093|Q5VSL9-2|STRIP1;ENSG00000143093|ENST00000369795|STRIP1	ENST00000485775.5_1_1:110582506-110596531:+|nuORF	ENST00000485775.5_1_1:110582506-110596531:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	620.8314208984375	2	620.833931	1239.65331	-0.51032	-0.00031683	-2.8909	-0.0017947	-3.4012	-0.0021116	620.8322011425744	61.29	0.6341	61.679	61.505	62.139	0.38945					46	16	4	0	0	0	0.31387	1	6546	6546		72.879	1.0018	1	633710			18222	4600	12242	12251	21135	21135					0.043068796313491475
IMTMPIRY	8	Unmodified	_IMTMPIRY_					0	0	0			REV__ENST00000494357.1_1_7:99170104-99170224:+|nuORF	REV__ENST00000494357.1_1_7:99170104-99170224:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.7698364257812	2	512.769548	1023.52454	-1.8226	-0.00093456	0.83344	0.00042736	-0.98913	-0.0005072	512.7698417086234	38.338	0.98523	38.349	37.991	38.976	0.011173					59	22	4	0	0	0	0.92457	1	2647	2647		47.916	4.2896	1	512150	+		18223	27716	12243	12252	21136	21136					0.013722461874067449
IMVPLLIYG	9	Unmodified	_IMVPLLIYG_					0	0	0		ENST00000343028.8_3_12:27126735-27126897:-|nuORF	ENST00000343028.8_3_12:27126735-27126897:-|nuORF	ENST00000343028.8_3_12:27126735-27126897:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80364990234375	2	509.803914	1017.59328	-0.93407	-0.00047619	0.69236	0.00035297	-0.24171	-0.00012323	509.8042014095356	84.682	2.4835	84.682	83.134	85.618	0					128	59	3	0	0	0	0.78292	1	8058	8058		29.842	1.5873	1	609880			18224	10276	12244	12253	21137	21137					0.08518233758786664
IMWCKVMIMYV	11	Unmodified	_IMWCKVMIMYV_					0	0	0			REV__ENSG00000146648|ENST00000275493|EGFR	REV__ENSG00000146648|ENST00000275493|EGFR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.9010925292969	3	472.901864	1415.68376	-0.25038	-0.00011841	-2.9636	-0.0014015	-3.2139	-0.0015199	472.9004563750528	30.68	0.78433	30.633	30.347	31.131	-0.047064					43	20	3	0	0	0	0.75544	1	1697	1697		20.837	3.004	1	140320	+		18225	20025	12245	12254	21138	21138					-0.007451245711081356
IMWKEVAVGDI	11	Oxidation (M)	_IM(Oxidation (M))WKEVAVGDI_		IM(1)WKEVAVGDI		IM(85)WKEVAVGDI	0	0	1		nc|ENSG00000132932|Q9NTI2-3|ATP8A2;nc|ENSG00000132932|Q9NTI2-1|ATP8A2;ENSG00000132932|ENST00000381655|ATP8A2	nc|ENSG00000132932|Q9NTI2-3|ATP8A2	nc|ENSG00000132932|Q9NTI2-3|ATP8A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	638.8347778320312	2	638.833931	1275.65331	0.70348	0.0004494	1.9691	0.0012579	2.6725	0.0017073	638.8348170860995	74.695	1.1442	74.827	74.537	75.682	0.13208					77	32	4	0	0	0	0.13306	2	6915	6907;6915		85.161	14.345	1	682170			18226	3842	12246	12255	21139;21140	21140		69			0.0265087963134647
INACRLTHPL	10	Unmodified	_INACRLTHPL_					0	0	0			REV__ENSG00000167757|ENST00000453757|KLK11	REV__ENSG00000167757|ENST00000453757|KLK11	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.3167724609375	2	569.3135	1136.61245	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.794	1	79.794	79.294	80.294	0								0	0	0	0.45132	1	7347	7347		34.173	1.422	1		+		18227	21427	12247	12256	21141	21141					0.049605831023882274
INATIEILF	9	Unmodified	_INATIEILF_					0	0	0			REV__ENST00000581802.1_1_18:29542651-29543200:+|nuORF	REV__ENST00000581802.1_1_18:29542651-29543200:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2637939453125	2	517.30005	1032.58555	-0.070897	-3.6675E-05	3.5557	0.0018394	3.4849	0.0018027	517.3024550058115	78.762	1.146	79.325	78.91	80.056	0.56332					30	26	2	0	0	0	0.20789	1	9053	9053		60.972	10.947	1	85778	+		18228	19751	12248	12257	21142	21142					0.07055797762859584
INAVVVQH	8	Unmodified	_INAVVVQH_					0	0	0			REV__nc|ENSG00000127125|Q9HAB8-2|PPCS	REV__nc|ENSG00000127125|Q9HAB8-2|PPCS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2558898925781	2	440.255977	878.497401	-0.80222	-0.00035318	-0.17673	-7.7804E-05	-0.97895	-0.00043099	440.255838119575	56.406	1.4135	56.802	56.556	57.97	0.39672					60	33	3	0	0	0	0.86288	1	5841	5841		26.796	1.3459	1	2568800	+		18229	18723	12249	12258	21143	21143					0.05329221962904285
INCRLAGY	8	Unmodified	_INCRLAGY_					0	0	0			REV__ENSG00000047597|ENST00000378616|XK	REV__ENSG00000047597|ENST00000378616|XK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.2380676269531	2	455.234187	908.453822	4.4605	0.0020306	1.7421	0.00079308	6.2026	0.0028237	455.2350074692449	107.04	0.59283	107.19	106.9	107.49	0.14929					36	17	3	0	0	0	0.86288	1	13091	13091		26.796	0	1	661810	+		18230	16354	12250	12259	21144	21144					-0.0040671080588481345
INDRFEFPEQ	10	Unmodified	_INDRFEFPEQ_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2556457519531	3	432.206932	1293.59897	-0.18358	-7.9346E-05	-2.587	-0.0011181	-2.7705	-0.0011974	432.20574064757875	26.701	0.31779	26.526	26.296	26.613	-0.17559					11	6	2	0	0	0	0.37624	1	1492	1492		25.126	5.8633	1	33447			18231	7862	12251	12260	21145	21145					-0.03608996195839609
INEIDVHE	8	Unmodified	_INEIDVHE_					0	0	0			REV__ENSG00000180346|ENST00000603357|TIGD2	REV__ENSG00000180346|ENST00000603357|TIGD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.73663330078125	2	484.737814	967.461075	-0.098392	-4.7694E-05	-3.7431	-0.0018144	-3.8414	-0.0018621	484.7360154148434	80.446	0.58928	80.868	80.637	81.227	0.4215					33	13	4	0	0	0	0.91982	1	9246	9246		45.972	0.020292	1	504100	+		18232	22392	12252	12261	21146	21146					-0.023956997244681588
INEMNGHPG	9	Unmodified	_INEMNGHPG_					0	0	0			REV__nc|ENSG00000115137|Q9NZQ0-3|DNAJC27	REV__nc|ENSG00000115137|Q9NZQ0-3|DNAJC27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.71734619140625	2	484.716359	967.418164	1.6171	0.00078385	2.2868	0.0011084	3.9039	0.0018923	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.76764	1	11797	11797		34.173	0	1	7541600	+		18233	18087	12253	12262	21147	21147					-0.06684793053534577
INFEELLKQK	10	Unmodified	_INFEELLKQK_					0	0	0		nc|ENSG00000162614|Q0ZGT2-4|NEXN;nc|ENSG00000162614|Q0ZGT2-2|NEXN;ENSG00000162614|ENST00000334785|NEXN;nc|ENSG00000162614|Q0ZGT2-3|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2420654296875	3	421.243206	1260.70779	1.1529	0.00048564	-0.49828	-0.0002099	0.65459	0.00027574	421.24286811574484	21.146	2.4108	20.687	19.961	22.372	-0.4591					122	55	3	0	0	0	0.85981	1	708	708		26.75	0	1	84048			18234	5705	12254	12263	21148	21148					0.08786214774409018
INFILKIKYDS	11	Unmodified	_INFILKIKYDS_					0	0	0			REV__ENSG00000165124|ENST00000374469|SVEP1	REV__ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9316711425781	3	451.930739	1352.77039	-0.13819	-6.2454E-05	4.3636	0.0019721	4.2254	0.0019096	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.75121	1	10848	10848		21.78	4.6137	1	924270	+		18235	21151	12255	12264	21149	21149					0.1081136084260379
INFQQKKWTLQ	11	Unmodified	_INFQQKKWTLQ_					0	0	0		ENSG00000142621|ENST00000688493|FHAD1;nc|ENSG00000142621|B1AJZ9-4|FHAD1;nc|ENSG00000142621|B1AJZ9|FHAD1;nc|ENSG00000142621|B1AJZ9-3|FHAD1;ENST00000472131.5_1_1:15653545-15656069:+|nuORF;ENST00000459961.1_1_1:15653545-15655159:+|nuORF	ENSG00000142621|ENST00000688493|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.5875244140625	3	478.601504	1432.78268	-0.8608	-0.00041198	1.1892	0.00056913	0.32835	0.00015715	478.60212337155735	48.567	0.23904	49.471	49.25	49.489	0.90424					8	5	2	0	0	0	0.15431	1	4705	4705		61.765	0	1	362000			18236	4576	12256	12265	21150	21150					0.08360397305659717
INGKALALM	9	Unmodified	_INGKALALM_					0	0	0		nc|ENSG00000285467|P0CG22|DHRS4L1	nc|ENSG00000285467|P0CG22|DHRS4L1	nc|ENSG00000285467|P0CG22|DHRS4L1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7777404785156	2	465.775688	929.536823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.097	1	80.04	79.54	80.54	-0.056503								0	0	0	0.30053	1	8038	8038		30.504	1.3541	1				18237	15330	12257	12266	21151	21151					0.06923605922099796
INGKQKQTG	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))INGKQKQTG_					1	0	0			REV__ENST00000479187.5_1_12:40760824-40760887:+|nuORF	REV__ENST00000479187.5_1_12:40760824-40760887:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.280029296875	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.6204	1	8745	8745		45.972	8.1607	1	1954800	+		18238	27396	12258	12267	21152	21152					0.03911670812135526
INGKQKQTG	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))INGKQKQTG_					1	0	0			REV__ENST00000479187.5_1_12:40760824-40760887:+|nuORF	REV__ENST00000479187.5_1_12:40760824-40760887:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.27972412109375	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.58668	1	8776	8776		47.657	8.4045	1	1814000	+		18239	27396	12258	12267	21153	21153					0.03911670812135526
INGNRPAK	8	Unmodified	_INGNRPAK_					0	0	0		ENSG00000139132|ENST00000534526|FGD4;ENST00000497153.5_1_12:32717132-32727670:+|nuORF;ENST00000550091.5_1_12:32552793-32734916:+|nuORF;ENST00000473513.5_1_12:32717132-32732570:+|nuORF	ENSG00000139132|ENST00000534526|FGD4	ENSG00000139132|ENST00000534526|FGD4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25164794921875	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.86288	1	7573	7573		26.796	1.3459	1	1788100			18240	4346	12259	12268	21154	21154					0.048394536773685104
INGNRPAK	8	Unmodified	_INGNRPAK_					0	0	0		ENSG00000139132|ENST00000534526|FGD4;ENST00000497153.5_1_12:32717132-32727670:+|nuORF;ENST00000550091.5_1_12:32552793-32734916:+|nuORF;ENST00000473513.5_1_12:32717132-32732570:+|nuORF	ENSG00000139132|ENST00000534526|FGD4	ENSG00000139132|ENST00000534526|FGD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.251953125	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.87479	1	7837	7837		30.504	5.0535	1	3292300			18241	4346	12259	12268	21155	21155					0.048394536773685104
INGPVLAK	8	Unmodified	_INGPVLAK_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2578430175781	2	406.255446	810.496338	0.32239	0.00013097	4.1267	0.0016765	4.4491	0.0018075	406.25699058298386	55.031	2.344	55.122	53.969	56.313	0.091167					99	72	2	0	0	0	0.87479	1	4602	4602		30.504	3.7075	1	315510	+		18242	20437;29946	12260	12269	21156	21156					0.08351007593978466
INGSLPSLLL	10	Unmodified	_INGSLPSLLL_					0	0	0		nc|ENSG00000240771|Q86VW2-2|ARHGEF25;ENSG00000240771|ENST00000286494|ARHGEF25;nc|ENSG00000240771|Q86VW2-3|ARHGEF25	nc|ENSG00000240771|Q86VW2-2|ARHGEF25	nc|ENSG00000240771|Q86VW2-2|ARHGEF25	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3193359375	2	513.813325	1025.6121	-1.3646	-0.00070114	-2.78	-0.0014284	-4.1445	-0.0021295	514.3147251131827	53.766	0.19986	53.766	53.63	53.83	0					7	5	2	0	0	0	0.37624	1	4464	4464		37.812	0	1	81994			18243	8785	12261	12270	21157	21157					0.10031486654202126
INGVGKRHR	9	Unmodified	_INGVGKRHR_					0	0	0		ENST00000371822.9_1_X:117480162-117480498:+|nuORF	ENST00000371822.9_1_X:117480162-117480498:+|nuORF	ENST00000371822.9_1_X:117480162-117480498:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8104858398438	2	518.809774	1035.60499	1.4869	0.00077141	-0.58293	-0.00030243	0.90395	0.00046898	518.8094559796755	98.41	1.4425	98.787	98.408	99.851	0.37679					96	35	4	0	0	0	0.74721	1	11863	11863		37.159	1.5408	1	12414000			18244	10678	12262	12271	21158	21158					0.08861611616976006
INGVWVEP	8	Unmodified	_INGVWVEP_					0	0	0		ENST00000496704.1_1_2:130899553-130900555:-|nuORF;nc|ENSG00000163040|Q96AQ1|CCDC74A;nc|ENSG00000152076|Q96LY2|CCDC74B	ENST00000496704.1_1_2:130899553-130900555:-|nuORF	ENST00000496704.1_1_2:130899553-130900555:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79248046875	2	457.242535	912.470518	-0.26593	-0.0001216	-4.4715	-0.0020445	-4.7374	-0.0021661	457.24030950342944	38.068	0.72145	38.59	38.357	39.079	0.52235					23	17	2	0	0	0	0.4196	1	3155	3155		23.042	3.0457	1	218380			18245	12789	12263	12272	21159	21159					0.010781133517070884
INHFYCADPPL	11	Unmodified	_INHFYCADPPL_					0	0	0		ENSG00000150269|ENST00000279791|OR5M9	ENSG00000150269|ENST00000279791|OR5M9	ENSG00000150269|ENST00000279791|OR5M9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	645.3056640625	2	645.302798	1288.59104	1.4963	0.00096557	0.12256	7.9089E-05	1.6189	0.0010447	645.8046429943444	42.357	0.61756	42.361	42.066	42.683	0.0043983					26	17	2	0	0	0	0.64498	1	2850	2850		39.253	1.4413	1	136300			18246	5060	12264	12273	21160	21160					-0.04170846716988308
INICLYMNQL	10	Oxidation (M)	_INICLYM(Oxidation (M))NQL_		INICLYM(1)NQL		INICLYM(66)NQL	0	0	1		nc|ENSG00000164113|Q96M93-3|ADAD1;nc|ENSG00000164113|Q96M93-2|ADAD1;ENSG00000164113|ENST00000296513|ADAD1	nc|ENSG00000164113|Q96M93-3|ADAD1	nc|ENSG00000164113|Q96M93-3|ADAD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	620.81005859375	2	620.806859	1239.59917	-0.56995	-0.00035383	2.9415	0.0018261	2.3715	0.0014722	620.8089892457849	59.564	1.2818	59.955	59.441	60.723	0.39077					85	32	5	0	0	0	0.37206	1	6282	6282		66.429	11.653	1	3018100			18247	5920	12265	12274	21161	21161		101			-0.011050357918747977
INIGEKMKGFV	11	Unmodified	_INIGEKMKGFV_					0	0	0			REV__ENST00000486414.1_1_10:116449904-116450108:-|nuORF	REV__ENST00000486414.1_1_10:116449904-116450108:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.345703125	2	618.344466	1234.67438	0.55169	0.00034113	1.7728	0.0010962	2.3245	0.0014373	618.3454418699644	97.724	3.0702	97.772	96.827	99.897	0.048157					199	71	4	0	0	0	0.61369	1	10462	10462		42.864	5.0528	1	831610	+		18248	27553	12266	12275	21162	21162					0.06642889730869683
INIGEKMKGFV	11	Unmodified	_INIGEKMKGFV_					0	0	0			REV__ENST00000486414.1_1_10:116449904-116450108:-|nuORF	REV__ENST00000486414.1_1_10:116449904-116450108:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	618.34521484375	2	618.344466	1234.67438	-1.2296	-0.00076029	3.5766	0.0022115	2.347	0.0014513	618.3465539597456	97.787	3.3462	97.982	96.915	100.26	0.19585					219	77	4	0	0	0	0.69995	1	10037	10037		31.53	3.6476	1	806570	+		18249	27553	12266	12275	21163	21163					0.06642889730869683
INIIVVTP	8	Unmodified	_INIIVVTP_					0	0	0		ENST00000450119.1_1_10:92813377-92813905:+|nuORF	ENST00000450119.1_1_10:92813377-92813905:+|nuORF	ENST00000450119.1_1_10:92813377-92813905:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77874755859375	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.86288	1	3932	3932		26.796	0	1	1803700			18250	11888	12267	12276	21164	21164					0.10388447425293634
INIKKITGLYF	11	Unmodified	_INIKKITGLYF_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26763916015625	3	437.267463	1308.78056	-0.73822	-0.0003228	1.6574	0.00072472	0.91917	0.00040192	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.77205	1	4475	4475		17.167	0	1	3639500	+		18251	19767	12268	12277	21165	21165					0.13851968567837503
INIKKITGLYF	11	Unmodified	_INIKKITGLYF_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2677917480469	3	437.267463	1308.78056	-1.575	-0.00068869	2.5334	0.0011078	0.95842	0.00041909	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.77205	1	3944	3944		17.167	0.63689	1	3429700	+		18252	19767	12268	12277	21166	21166					0.13851968567837503
INIKKITGLYF	11	Unmodified	_INIKKITGLYF_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.267822265625	3	437.267463	1308.78056	-1.5729	-0.00068777	2.5865	0.001131	1.0137	0.00044325	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.75457	1	4111	4111		21.032	3.1991	1	4358700	+		18253	19767	12268	12277	21167	21167					0.13851968567837503
INIMKMAILPK	11	Unmodified	_INIMKMAILPK_					0	0	0		L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|77|3|sense;L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|108|2|sense	L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|77|3|sense	L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|77|3|sense	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	636.3784790039062	2	636.382537	1270.75052	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.821	1	67.821	67.321	68.321	0								0	0	0	0.56276	1	6004	6004		24.519	2.8334	1				18254	14622	12269	12278	21168	21168					0.12597570306638772
INISKLDRHI	10	Unmodified	_INISKLDRHI_					0	0	0			REV__ENST00000593906.1_1_19:40698163-40710439:+|nuORF	REV__ENST00000593906.1_1_19:40698163-40710439:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.858642578125	2	604.859129	1207.70371	0.29518	0.00017854	-1.0358	-0.00062653	-0.74066	-0.00044799	604.8584188713688	80.866	0.85687	81.288	80.891	81.748	0.4215					70	20	4	0	0	0	0.86647	1	9362	9362		23.523	0	1	4835500	+		18255	18902	12270	12279	21169	21169					0.10816170071393572
INIYTMYPQ	9	Unmodified	_INIYTMYPQ_					0	0	0		L1MA1_dup2411|chrX:76191796-76193207:-|1.3734964326863903|0.4902543273978149|1.49|63.0|19|1|sense	L1MA1_dup2411|chrX:76191796-76193207:-|1.3734964326863903|0.4902543273978149|1.49|63.0|19|1|sense	L1MA1_dup2411|chrX:76191796-76193207:-|1.3734964326863903|0.4902543273978149|1.49|63.0|19|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.778564453125	2	571.781167	1141.54778	-0.93444	-0.0005343	-2.6121	-0.0014935	-3.5465	-0.0020278	571.7796222487941	57.04	0.62537	57.437	57.116	57.741	0.39672					28	14	3	0	0	0	0.41566	1	5921	5921		56.721	1.9447	1	430830			18256	14530	12271	12280	21170	21170					-0.017330364942608867
INKCSILSL	9	Unmodified	_INKCSILSL_					0	0	0			REV__nc|ENSG00000135773|O14815-2|CAPN9	REV__nc|ENSG00000135773|O14815-2|CAPN9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	495.7840270996094	2	495.786253	989.557952	-0.16032	-7.9484E-05	-3.325	-0.0016485	-3.4853	-0.001728	495.7845305067305	56.942	0.5784	56.914	56.711	57.289	-0.028664					28	16	2	0	0	0	0.44421	1	5231	5231		54.776	5.3348	1	206710	+		18257	19248	12272	12281	21171	21171					0.06275571230992227
INKICAVL	8	Unmodified	_INKICAVL_					0	0	0			REV__ENSG00000182378|ENST00000381657|PLCXD1	REV__ENSG00000182378|ENST00000381657|PLCXD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.265869140625	2	437.264956	872.515359	1.7902	0.0007828	0.24809	0.00010848	2.0383	0.00089128	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.884	1	762	762		33.516	0	1	738160	+		18258	15949	12273	12282	21172	21172					0.0740022089340755
INKYLEQTD	9	Unmodified	_INKYLEQTD_					0	0	0			REV__ENSG00000196329|ENST00000358647|GIMAP5	REV__ENSG00000196329|ENST00000358647|GIMAP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.2857666015625	2	562.285128	1122.5557	-0.14594	-8.2059E-05	2.8601	0.0016082	2.7142	0.0015262	562.2865603679315	63.403	0.99493	63.79	63.402	64.397	0.38779					51	22	3	0	0	0	0.66686	1	6840	6840		42.864	3.6114	1	480010	+		18259	23116	12274	12283	21173	21173					-0.0006718597312556085
INLILFLRTY	10	Unmodified	_INLILFLRTY_					0	0	0			REV__ENSG00000111817|ENST00000644252|DSE	REV__ENSG00000111817|ENST00000644252|DSE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5921936035156	3	422.592058	1264.75434	-0.80518	-0.00034026	2.6379	0.0011148	1.8327	0.0007745	422.59310710706274	46.905	2.5172	47.828	47.069	49.587	0.92315					149	61	4	0	0	0	0.8492	1	4541	4541		18.531	1.3643	1	3696000	+		18260	17898	12275	12284	21174	21174					0.13255699396381715
INLITASWLL	10	Unmodified	_INLITASWLL_					0	0	0			REV__nc|ENSG00000125355|Q5JRV8-2|TMEM255A	REV__nc|ENSG00000125355|Q5JRV8-2|TMEM255A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.3385620117188	2	572.342249	1142.66995	0.5725	0.00032767	-4.415	-0.0025269	-3.8425	-0.0021992	572.3396541914032	101.39	0.82917	101.6	101.2	102.03	0.2058					35	19	2	0	0	0	0.86218	1	10648	10648		32.812	8.2932	1	407040	+		18261	18639	12276	12285	21175	21175					0.10431748579617306
INLLRTEESE	10	Unmodified	_INLLRTEESE_					0	0	0			REV__ENSG00000010292|ENST00000315579|NCAPD2	REV__ENSG00000010292|ENST00000315579|NCAPD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2119140625	3	401.878704	1202.61428	1.1314	0.0004547	-3.826	-0.0015376	-2.6945	-0.0010829	401.87682841630664	52.018	0.61638	52.442	52.021	52.638	0.42348					28	14	3	0	0	0	0.63899	1	5186	5186		47.96	6.5329	1	1250400	+		18262	16161	12277	12286	21176	21176					0.02107870601344075
INLNGDQY	8	Unmodified	_INLNGDQY_					0	0	0			REV__nc|ENSG00000020922|P49959-2|MRE11	REV__nc|ENSG00000020922|P49959-2|MRE11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72332763671875	2	468.724707	935.43486	-0.013184	-6.1798E-06	-3.3225	-0.0015574	-3.3357	-0.0015635	468.7232380662735	77.148	2.5429	77.547	77.268	79.811	0.3997					145	61	5	0	0	0	0.91472	1	8829	8829		44.117	3.5442	1	15095000	+		18263	16238	12278	12287	21177	21177					-0.03543968895951366
INLRHGSG	8	Unmodified	_INLRHGSG_					0	0	0			REV__nc|ENSG00000169180|Q96QU8-2|XPO6	REV__nc|ENSG00000169180|Q96QU8-2|XPO6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.295166015625	2	427.235576	852.456599	-0.18162	-7.7596E-05	2.7985	0.0011956	2.6169	0.001118	427.23686212115956	76.33	0.1985	76.379	76.263	76.461	0.049194					6	5	2	0	0	0	0.4196	1	7357	7357		23.042	1.0826	1	30635	+		18264	21557	12279	12288	21178	21178					0.02446880643287841
INLRHGSG	8	Unmodified	_INLRHGSG_					0	0	0			REV__nc|ENSG00000169180|Q96QU8-2|XPO6	REV__nc|ENSG00000169180|Q96QU8-2|XPO6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	427.235576	852.456599	1.8364	0.00078459	3.9747	0.0016981	5.8111	0.0024827	427.2363626968477	76.302	0.28954	76.35	76.25	76.539	0.047981	-0.089006	0.00022029	NaN	23.042	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26894	+		18265	21557	12279	12288							0.02446880643287841
INLRYYVDWIQ	11	Unmodified	_INLRYYVDWIQ_					0	0	0			REV__ENSG00000135740|ENST00000299798|SLC9A5	REV__ENSG00000135740|ENST00000299798|SLC9A5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.3133850097656	3	494.92951	1481.7667	0.16081	7.9592E-05	-3.4623	-0.0017136	-3.3015	-0.001634	494.92788451066417	34.257	0.45483	34.467	34.149	34.604	0.21003					12	10	2	0	0	0	0.17437	1	2541	2541		20.315	9.3168	1	75469	+		18266	19243	12280	12289	21179	21179					0.04508691068758708
INLSLLVP	8	Unmodified	_INLSLLVP_					0	0	0		ENSG00000102053|ENST00000338957|ZC3H12B	ENSG00000102053|ENST00000338957|ZC3H12B	ENSG00000102053|ENST00000338957|ZC3H12B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7800598144531	2	434.778754	867.542954	0.17139	7.4517E-05	3.201	0.0013917	3.3724	0.0014663	434.7800235008866	37.854	1.477	37.948	37.639	39.116	0.094318					162	48	4	0	0	0	0.90465	1	2336	2336		40.573	7.057	1	2203700			18267	1984	12281	12290	21180	21180					0.10388447425282266
INLTRLKKRRH	11	Unmodified	_INLTRLKKRRH_					0	0	0			REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9743347167969	3	478.975788	1433.90553	-1.6051	-0.0007688	-1.0482	-0.00050206	-2.6533	-0.0012709	478.9751768575692	49.706	2.3794	49.706	48.538	50.918	0					127	57	3	0	0	0	0.78351	2	4072	4007;4072		14.779	5.567	1	134370	+		18268	25898	12282	12291	21181;21182	21182					0.20593698547577333
INLTRLKKRRH	11	Unmodified	_INLTRLKKRRH_					0	0	0			REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.97412109375	3	478.975788	1433.90553	0.006833	3.2729E-06	-2.5965	-0.0012437	-2.5897	-0.0012404	478.9744559828599	50.975	1.3531	50.973	50.261	51.614	-0.0020447					59	37	2	0	0	0	0.77803	1	4345	4345		15.921	2.9632	1	175970	+		18269	25898	12282	12291	21183	21183					0.20593698547577333
INLTRLKKRRH	11	Unmodified	_INLTRLKKRRH_					0	0	0			REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9754943847656	3	478.975788	1433.90553	-0.72157	-0.00034562	-1.7607	-0.00084335	-2.4823	-0.001189	478.97494935068806	47.94	1.1198	47.915	47.673	48.793	-0.025326					45	28	2	0	0	0	0.80164	1	4114	4114		10.998	2.1989	1	261310	+		18270	25898	12282	12291	21184	21184					0.20593698547577333
INLTRLKKRRH	11	Unmodified	_INLTRLKKRRH_					0	0	0			REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97491455078125	3	478.975788	1433.90553	-0.59951	-0.00028715	-1.9641	-0.00094078	-2.5637	-0.0012279	479.30919988874916	53.475	3.0495	53.45	51.564	54.614	-0.02475					117	77	2	0	0	0	0.78351	1	4552	4552		14.779	8.3599	1	217940	+		18271	25898	12282	12291	21185	21185					0.20593698547577333
INLTRLKKRRH	11	Unmodified	_INLTRLKKRRH_					0	0	0			REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97412109375	3	478.975788	1433.90553	-0.90277	-0.0004324	-1.6609	-0.00079555	-2.5637	-0.001228	478.97487033218596	49.369	1.842	49.394	48.497	50.339	0.025578					115	47	3	0	0	0	0.75779	1	3800	3800		20.315	6.8071	1	238510	+		18272	25898	12282	12291	21186	21186					0.20593698547577333
INLTRLKKRRH	11	Unmodified	_INLTRLKKRRH_					0	0	0			REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9762268066406	3	478.975788	1433.90553	0.34157	0.0001636	-2.911	-0.0013943	-2.5694	-0.0012307	478.9743151753571	51.804	1.1678	51.863	51.373	52.541	0.059719					70	37	2	0	0	0	0.77511	1	4096	4096		16.53	3.5724	1	347520	+		18273	25898	12282	12291	21187	21187					0.20593698547577333
INLTRLKKRRH	11	Unmodified	_INLTRLKKRRH_					0	0	0			REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	REV__ENST00000378535.4_1_12:88890181-88890376:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9747009277344	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.619	1	52.544	52.044	53.044	-0.074509								0	0	0	0.56276	1	4257	4257		9.2118	3.2108	1		+		18274	25898	12282	12291	21188	21188					0.20593698547577333
INMKTVGIL	9	Unmodified	_INMKTVGIL_					0	0	0			REV__ENST00000531564.1_1_8:11281884-11301161:-|nuORF	REV__ENST00000531564.1_1_8:11281884-11301161:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7947998046875	2	494.79662	987.578688	-0.71818	-0.00035535	-2.866	-0.0014181	-3.5841	-0.0017734	494.794924428077	59.527	1.1168	60.08	59.775	60.891	0.55323					46	29	3	0	0	0	0.17181	1	6295	6295		79.713	2.866	1	901690	+		18275	20383	12283	12292	21189	21189					0.08440161610644736
INMMGGTN	8	Unmodified	_INMMGGTN_					0	0	0			REV__ENST00000315274.6_1_11:102661490-102662103:-|nuORF	REV__ENST00000315274.6_1_11:102661490-102662103:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.18408203125	2	419.183306	836.352059	-1.8692	-0.00078353	2.8042	0.0011755	0.93497	0.00039192	419.1844600830513	87.331	0.82175	87.496	87.128	87.95	0.16473					44	18	4	0	0	0	0.8621	1	8593	8593		26.693	1.1189	1	531880	+		18276	24946	12284	12293	21190	21190					-0.07266325219950431
INMVFGGLRP	10	Unmodified	_INMVFGGLRP_					0	0	0			REV__ENST00000598155.5_1_19:46318820-46327397:-|nuORF	REV__ENST00000598155.5_1_19:46318820-46327397:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.3074340820312	2	552.305144	1102.59573	0.7768	0.00042903	1.633	0.00090193	2.4098	0.001331	552.3060097260034	92.551	2.2776	92.998	91.922	94.2	0.44661					137	53	3	0	0	0	0.80179	1	10892	10892		39.253	7.298	1	579750	+		18277	18666	12285	12294	21191	21191					0.04854082216434108
INNKSTQKR	9	Unmodified	_INNKSTQKR_					0	0	0			REV__ENSG00000206559|ENST00000383768|ZCWPW2	REV__ENSG00000206559|ENST00000383768|ZCWPW2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.7650756835938	2	544.812179	1087.60981	0.24972	0.00013605	-4.2177	-0.0022979	-3.968	-0.0021618	544.8098002127978	31.774	0.3845	31.881	31.675	32.059	0.10707					13	8	2	0	0	0	0.20789	1	2165	2165		20.947	0.95016	1	137790	+		18278	23593	12286	12295	21192	21192					0.06950450969088706
INNNPEFLQ	9	Unmodified	_INNNPEFLQ_					0	0	0		ENSG00000112936|ENST00000313164|C7;CON__Q29RQ1	ENSG00000112936|ENST00000313164|C7	ENSG00000112936|ENST00000313164|C7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.4905395507812	2	544.772188	1087.52982	-0.63253	-0.00034459	0.9469	0.00051584	0.31437	0.00017126	544.7725467308171	51.748	0.75399	52.183	51.659	52.413	0.43505					31	17	3	0	0	0	0.20789	1	5109	5109		64.207	0.901	1	145240		+	18279	610	12287	12296	21193	21193					-0.0104403542475211
INPLSLVAM	9	Unmodified	_INPLSLVAM_					0	0	0			REV__ENSG00000138271|ENST00000260843|GPR87	REV__ENSG00000138271|ENST00000260843|GPR87	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2774353027344	2	479.275521	956.536489	0.61468	0.0002946	3.1717	0.0015201	3.7864	0.0018147	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.77546	1	7708	7708		31.955	1.4512	1	1802300	+		18280	19453	12288	12297	21194	21194					0.05648186202245142
INPLSLVAM	9	Unmodified	_INPLSLVAM_					0	0	0			REV__ENSG00000138271|ENST00000260843|GPR87	REV__ENSG00000138271|ENST00000260843|GPR87	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27740478515625	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.74721	1	9955	9955		37.159	0	1	5642300	+		18281	19453	12288	12297	21195	21195					0.05648186202245142
INPNTYSQ	8	Unmodified	_INPNTYSQ_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|135|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|135|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|135|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7227783203125	2	468.724707	935.43486	0.2898	0.00013584	-3.089	-0.0014479	-2.7992	-0.0013121	468.72314185880225	88.014	0.7705	88.463	88.143	88.914	0.44893					40	18	3	0	0	0	0.8537	1	10367	10367		25.574	1.3713	1	647170			18282	14626	12289	12298	21196	21196					-0.03543968895939997
INQCQRNL	8	Unmodified	_INQCQRNL_					0	0	0			REV__nc|ENSG00000148848|O43184-3|ADAM12	REV__nc|ENSG00000148848|O43184-3|ADAM12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7947692871094	2	494.753276	987.491998	-1.3244	-0.00065525	0.80326	0.00039741	-0.52113	-0.00025783	494.75331438616183	59.844	0.60625	60.235	59.932	60.538	0.39077					24	15	2	0	0	0	0.4196	1	6307	6307		57.811	7.7867	1	343970	+		18283	20143	12290	12299	21197	21197					-0.0022482489122239713
INQSKILEYN	10	Unmodified	_INQSKILEYN_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X;REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y	REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3336791992188	2	611.327328	1220.6401	0.41561	0.00025408	2.9005	0.0017732	3.3161	0.0020272	611.3290637952541	78.627	1.0378	78.573	78.292	79.329	-0.053558					59	27	3	0	0	0	0.57924	1	7884	7884		51.193	9.7661	1	333110	+		18284	17333;17099	12291	12300	21198	21198					0.03860764843625475
INQSKILEYN	10	Unmodified	_INQSKILEYN_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X;REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y	REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.330322265625	2	611.327328	1220.6401	0.7105	0.00043435	2.4744	0.0015127	3.1849	0.001947	611.3288931083291	78.39	0.975	78.526	78.284	79.259	0.13667					60	27	3	0	0	0	0.69342	1	7415	7415		45.022	4.964	1	454390	+		18285	17333;17099	12291	12300	21199	21199					0.03860764843625475
INQSKILEYN	10	Unmodified	_INQSKILEYN_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X;REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y	REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3301391601562	2	611.327328	1220.6401	-0.91837	-0.00056142	3.9793	0.0024327	3.061	0.0018712	611.32977638209	78.511	1.062	78.605	78.288	79.35	0.0942					75	32	4	0	0	0	0.66675	1	7384	7384		46.457	7.2039	1	422640	+		18286	17333;17099	12291	12300	21200	21200					0.03860764843625475
INRKVTRKPP	10	Unmodified	_INRKVTRKPP_					0	0	0			REV__ENSG00000075131|ENST00000261881|TIPIN	REV__ENSG00000075131|ENST00000261881|TIPIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5913391113281	3	403.591051	1207.75132	-1.9386	-0.00078239	-0.42796	-0.00017272	-2.3665	-0.00095511	403.5908338947275	16.138	0.20859	16.186	16.081	16.289	0.047802					15	9	2	0	0	0	0.86587	1	118	118		21.78	5.063	1	93875	+		18287	16701	12292	12301	21201	21201					0.155758690622406
INRQWLRKPV	10	Unmodified	_INRQWLRKPV_					0	0	0		ENSG00000158683|ENST00000289672|PKD1L1;nc|ENSG00000158683|Q8TDX9-2|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2677001953125	3	437.266568	1308.77787	0.31383	0.00013723	2.5449	0.0011128	2.8587	0.00125	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.85285	1	4387	4387		16.717	0.18753	1	2521600			18288	5492	12293	12302	21202	21202					0.13583557953529635
INSIGLNTP	9	Unmodified	_INSIGLNTP_					0	0	0			REV__nc|ENSG00000069188|Q58EX2-2|SDK2	REV__nc|ENSG00000069188|Q58EX2-2|SDK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.75860595703125	2	464.758549	927.502546	0.82813	0.00038488	-0.78159	-0.00036325	0.046535	2.1627E-05	464.75800958652354	33.711	0.74689	34.016	33.66	34.406	0.30495					53	17	4	0	0	0	0.33718	1	2456	2456		62.107	1.1355	1	1292900	+		18289	16576	12294	12303	21203	21203					0.03589481034862274
INTKHNIIY	9	Unmodified	_INTKHNIIY_					0	0	0		ENSG00000114686|ENST00000264995|MRPL3	ENSG00000114686|ENST00000264995|MRPL3	ENSG00000114686|ENST00000264995|MRPL3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.2859497070312	2	558.314023	1114.61349	0.4403	0.00024582	0.76793	0.00042874	1.2082	0.00067457	558.3120911899946	75.195	0.7242	75.24	74.906	75.63	0.045097					23	19	2	0	0	0	0.20789	1	7301	7301		47.657	15.702	1	19584			18290	2785	12295	12304	21204	21204					0.06077120742952502
INTNQNISI	9	Unmodified	_INTNQNISI_					0	0	0		nc|ENSG00000068305|Q02078|MEF2A;ENSG00000068305|ENST00000557942|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-7|MEF2A;nc|ENSG00000068305|Q02078-8|MEF2A;ENST00000561125.2_1_15:100246921-100252973:+|nuORF	nc|ENSG00000068305|Q02078|MEF2A	nc|ENSG00000068305|Q02078|MEF2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7708740234375	2	508.772188	1015.52982	1.319	0.00067108	-1.5385	-0.00078273	-0.21946	-0.00011166	508.77133558794765	49.499	0.60856	50.344	50.074	50.683	0.84501					37	14	3	0	0	0	0.19437	1	4839	4839		75.043	2.1641	1	1920100			18291	1198	12296	12305	21205	21205					0.022679645752418764
INTTESLRL	9	Unmodified	_INTTESLRL_					0	0	0		ENSG00000118217|ENST00000367942|ATF6	ENSG00000118217|ENST00000367942|ATF6	ENSG00000118217|ENST00000367942|ATF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.7939453125	2	523.795663	1045.57677	-0.29272	-0.00015332	-3.017	-0.0015803	-3.3097	-0.0017336	523.7938789083427	18.875	0.79418	18.919	18.774	19.569	0.043749					84	37	3	0	0	0	0.7932	1	373	373		25.574	0	1	396290			18292	3018	12297	12306	21206	21206					0.055808241263775926
INTTKPKKKPP	11	Unmodified	_INTTKPKKKPP_					0	0	0			REV__nc|ENSG00000117222|Q15291-2|RBBP5	REV__nc|ENSG00000117222|Q15291-2|RBBP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3909301757812	2	626.392805	1250.77106	2.3084	0.0014459	4.3102	0.0026999	6.6186	0.0041458	626.3953217408156	109.92	1.4097	109.98	109.55	110.95	0.06794					99	57	2	0	0	0	0.72918	1	13398	13398		26.693	1.1189	1	615360	+		18293	18250	12298	12307	21207	21207					0.15570200282309088
INTTLFVNTFL	11	Unmodified	_INTTLFVNTFL_					0	0	0			REV__nc|ENSG00000121210|A2VDJ0-2|TMEM131L	REV__nc|ENSG00000121210|A2VDJ0-2|TMEM131L	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8601684570312	2	641.855721	1281.69689	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.76	1	119.79	119.29	120.29	0.026466								0	0	0	0.56276	1	13175	13175		31.53	1.2121	1		+		18294	29814	12299	12308	21208	21208					0.0673081240013289
INVGGGFHH	9	Unmodified	_INVGGGFHH_					0	0	0		ENST00000475818.5_1_3:13522761-13543460:+|nuORF;nc|ENSG00000163517|Q96DB2-2|HDAC11;ENSG00000163517|ENST00000295757|HDAC11	ENST00000475818.5_1_3:13522761-13543460:+|nuORF	ENST00000475818.5_1_3:13522761-13543460:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.7706604003906	2	469.235576	936.456599	-1.4896	-0.00069896	-0.4291	-0.00020135	-1.9187	-0.00090031	469.2353029091154	38.831	0.55178	39.386	39.194	39.746	0.55449					17	12	2	0	0	0	0.20789	1	3211	3211		31.955	2.8053	1	93034			18295	5813	12300	12309	21209	21209					-0.014171193567108276
INVKDTSRI	9	Unmodified	_INVKDTSRI_					0	0	0		chr13:31739706-31753368|13|13.69|0.0|20.38|+|2|RXFP2,None|1	chr13:31739706-31753368|13|13.69|0.0|20.38|+|2|RXFP2,None|1	chr13:31739706-31753368|13|13.69|0.0|20.38|+|2|RXFP2,None|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035888671875	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.73802	1	8466	8466		37.812	4.2959	1	9288900			18296	150	12301	12310	21210	21210					0.07224530363282611
INVKDTSRI	9	Unmodified	_INVKDTSRI_					0	0	0		chr13:31739706-31753368|13|13.69|0.0|20.38|+|2|RXFP2,None|1	chr13:31739706-31753368|13|13.69|0.0|20.38|+|2|RXFP2,None|1	chr13:31739706-31753368|13|13.69|0.0|20.38|+|2|RXFP2,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.7932	1	8775	8775		25.574	1.0549	1	12189000			18297	150	12301	12310	21211	21211					0.07224530363282611
INVLLLLD	8	Unmodified	_INVLLLLD_					0	0	0			REV__ENSG00000173890|ENST00000355897|GPR160	REV__ENSG00000173890|ENST00000355897|GPR160	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.79193115234375	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.84341	1	3967	3967		24.203	4.8428	1	186860	+		18298	21959	12302	12311	21212	21212					0.10984716596760791
INVLLLLD	8	Unmodified	_INVLLLLD_					0	0	0			REV__ENSG00000173890|ENST00000355897|GPR160	REV__ENSG00000173890|ENST00000355897|GPR160	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7930908203125	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.87479	1	2357	2357		30.504	3.7075	1	1834900	+		18299	21959	12302	12311	21213	21213					0.10984716596760791
INVLMKTVT	9	Unmodified	_INVLMKTVT_					0	0	0			REV__ENSG00000171505|ENST00000304880|OR1N1	REV__ENSG00000171505|ENST00000304880|OR1N1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8035583496094	2	509.801903	1017.58925	-0.073627	-3.7535E-05	3.6181	0.0018445	3.5444	0.001807	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.71772	1	10230	10230		39.253	0.44669	1	3087300	+		18300	21743	12303	12312	21214	21214					0.08116144265068215
INVLQETQ	8	Unmodified	_INVLQETQ_					0	0	0		nc|ENSG00000106772|Q8WUY3-4|PRUNE2;ENSG00000106772|ENST00000376718|PRUNE2;nc|ENSG00000106772|Q8WUY3-2|PRUNE2;nc|ENSG00000106772|Q8WUY3-3|PRUNE2;ENST00000492157.5_1_9:79438526-79520879:-|nuORF	nc|ENSG00000106772|Q8WUY3-4|PRUNE2	nc|ENSG00000106772|Q8WUY3-4|PRUNE2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.9582824707031	2	472.756007	943.497461	0.71665	0.0003388	-0.59746	-0.00028245	0.11919	5.6349E-05	472.75558941831434	34.183	0.66249	34.393	34.149	34.812	0.21002					22	15	2	0	0	0	0.4196	1	2553	2553		17.365	1.7232	1	391520			18301	2317	12304	12313	21215	21215					0.023451771722420744
INVMIPLGG	9	Unmodified	_INVMIPLGG_					0	0	0			REV__ENSG00000169126|ENST00000305242|ODAD2	REV__ENSG00000169126|ENST00000305242|ODAD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2637939453125	2	457.262413	912.510274	0.26759	0.00012236	3.9569	0.0018093	4.2245	0.0019317	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.77546	1	7811	7811		31.955	0	1	1458600	+		18302	21552	12305	12314	21216	21216					0.05051917030800723
INVNGIKLS	9	Unmodified	_INVNGIKLS_					0	0	0		L1MEd_dup15044|chr11:43860917-43861714:-|1.2379578247766878|0.3289477204013815|1.91|63.0|23|3|sense	L1MEd_dup15044|chr11:43860917-43861714:-|1.2379578247766878|0.3289477204013815|1.91|63.0|23|3|sense	L1MEd_dup15044|chr11:43860917-43861714:-|1.2379578247766878|0.3289477204013815|1.91|63.0|23|3|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27734375	2	479.290017	956.565481	-0.77291	-0.00037045	-0.65628	-0.00031455	-1.4292	-0.000685	479.2897283148434	84.55	0.7822	84.61	84.414	85.196	0.05925					22	17	2	0	0	0	0.20789	1	8604	8604		26.693	0	1	81511			18303	14604	12306	12315	21217	21217					0.0854604682289164
INVSSKIH	8	Unmodified	_INVSSKIH_					0	0	0			REV__ENSG00000100368|ENST00000403662|CSF2RB	REV__ENSG00000100368|ENST00000403662|CSF2RB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2612609863281	2	449.261259	896.507966	0.91517	0.00041115	-2.8818	-0.0012947	-1.9666	-0.00088351	449.25967482037305	100.46	1.0769	100.76	100.3	101.37	0.2999					49	26	2	0	0	0	0.93786	1	12158	12158		53.351	1.0523	1	439050	+		18304	17183	12307	12316	21218	21218					0.05557204617343814
INVVRIPG	8	Unmodified	_INVVRIPG_					0	0	0			REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.27362060546875	2	434.27417	866.533787	0.35944	0.0001561	-1.798	-0.00078083	-1.4386	-0.00062473	434.2731472035985	82.213	1.3748	82.686	82.162	83.537	0.47383					62	33	3	0	0	0	0.884	1	9533	9533		33.516	1.5607	1	1384700	+		18305	30256	12308	12317	21219	21219					0.09518098859609836
INVVYDLLR	9	Unmodified	_INVVYDLLR_					0	0	0			REV__nc|ENSG00000197256|Q63ZY3-3|KANK2	REV__nc|ENSG00000197256|Q63ZY3-3|KANK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8242797851562	2	552.824224	1103.63389	0.64746	0.00035793	-0.51514	-0.00028478	0.13232	7.315E-05	552.8237799511401	77.799	0.7224	77.936	77.632	78.354	0.13667					62	25	3	0	0	0	0.69624	1	7353	7353		40.778	6.8565	1	521170	+		18306	23212	12309	12318	21220	21220					0.08622291402753035
INWIRPTL	8	Unmodified	_INWIRPTL_					0	0	0		nc|ENSG821|P63135|ERVK-7_pol;nc|ENSG851|Q9QC07|ERVK-18_pol;nc|ENSG855|P10266|ERVK-10_pol;nc|ENSG853|Q9UQG0|ERVK-11;nc|ENSG844|Q9WJR5|ERVK-19_pol;nc|ENSG826|Q9BXR3|ERVK-6_gag;nc|ENSG832|P63136|ERVK-25_pol;nc|ENSG801|P63132|HERVK_113_pro	nc|ENSG821|P63135|ERVK-7_pol	nc|ENSG821|P63135|ERVK-7_pol	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8002014160156	2	506.800552	1011.58655	-0.048814	-2.4739E-05	0.95871	0.00048587	0.90989	0.00046113	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.87064	1	3162	3162		29.15	0	1	475290			18307	15361	12310	12319	21221	21221					0.0812205692243424
INWNSHVIK	9	Unmodified	_INWNSHVIK_					0	0	0			REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.8076171875	2	555.806365	1109.59818	0.2531	0.00014067	-0.24733	-0.00013747	0.0057707	3.2074E-06	555.8062035865635	59.386	0.70735	59.48	59.191	59.898	0.094059					50	20	3	0	0	0	0.71772	1	5072	5072		39.253	5.0803	1	269860	+		18308	18297	12311	12320	21222	21222					0.047762539457608
INWNSHVIK	9	Unmodified	_INWNSHVIK_					0	0	0			REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.8057861328125	2	555.806365	1109.59818	0.48387	0.00026894	-0.37009	-0.0002057	0.11378	6.3241E-05	555.8060936084939	59.421	0.71672	59.535	59.153	59.87	0.11396					34	20	2	0	0	0	0.51592	1	5079	5079		51.193	0	1	296800	+		18309	18297	12311	12320	21223	21223					0.047762539457608
INWNSHVIK	9	Unmodified	_INWNSHVIK_					0	0	0			REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.8059692382812	2	555.806365	1109.59818	-0.42033	-0.00023362	0.11001	6.1142E-05	-0.31033	-0.00017248	555.8063865740231	59.517	0.80318	59.518	59.103	59.906	0.00051498					49	24	3	0	0	0	0.48102	1	5109	5109		52.937	1.6012	1	172100	+		18310	18297	12311	12320	21224	21224					0.047762539457608
IPAAIEQLIVP	11	Unmodified	_IPAAIEQLIVP_					0	0	0		ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3535766601562	2	582.355357	1162.69616	0.15829	9.2184E-05	-3.0082	-0.0017518	-2.8499	-0.0016597	582.3534714256248	107.11	1.1934	107.15	106.63	107.82	0.035622					78	27	4	0	0	0	0.69995	1	11697	11697		31.53	1.0262	1	791140			18311	921	12312	12321	21225	21225					0.12132017751082458
IPAAIEQLIVP	11	Unmodified	_IPAAIEQLIVP_					0	0	0		ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3536987304688	2	582.355357	1162.69616	0.16989	9.8934E-05	-3.1776	-0.0018505	-3.0077	-0.0017515	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.7434	1	12474	12474		23.523	5.2606	1	635410			18312	921	12312	12321	21226	21226					0.12132017751082458
IPAAIEQLIVP	11	Unmodified	_IPAAIEQLIVP_					0	0	0		ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3535766601562	2	582.355357	1162.69616	0.88325	0.00051437	-4.1095	-0.0023932	-3.2263	-0.0018788	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.72918	1	11112	11112		26.693	0	1	125340000			18313	921	12312	12321	21227	21227					0.12132017751082458
IPAAIEQLIVP	11	Unmodified	_IPAAIEQLIVP_					0	0	0		ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3517456054688	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.72918	2	12712	12214;12712		26.693	4.1133	1	3937500			18314	921	12312	12321	21228;21229	21229					0.12132017751082458
IPAALNKF	8	Unmodified	_IPAALNKF_					0	0	0			REV__nc|ENSG00000132912|Q9UJW0-2|DCTN4	REV__nc|ENSG00000132912|Q9UJW0-2|DCTN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2656555175781	2	437.263271	872.511988	1.7622	0.00077054	3.9045	0.0017073	5.6667	0.0024778	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.81548	1	965	965		20.482	3.1169	1	1079000	+		18315	19042	12313	12322	21230	21230					0.07063294111037521
IPAAQVIL	8	Unmodified	_IPAAQVIL_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3;ENST00000508181.5_1_5:94842662-94852339:-|nuORF	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7670593261719	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.90024	1	2549	2549		39.021	9.18	1	2097300			18316	8303	12314	12323	21231	21231					0.09792178253815109
IPAEERAIPFV	11	Unmodified	_IPAEERAIPFV_					0	0	0			REV__ENSG00000186472|ENST00000333891|PCLO	REV__ENSG00000186472|ENST00000333891|PCLO	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.392578125	2	621.348063	1240.68157	0.69095	0.00042932	-3.0386	-0.001888	-2.3477	-0.0014587	621.3455596427754	104.55	0.24042	104.59	104.43	104.67	0.039864					6	5	2	0	0	0	0.17347	1	11376	11376		44.377	25.274	1	41981	+		18317	22856	12315	12324	21232	21232					0.07085945602921129
IPAFLTLV	8	Unmodified	_IPAFLTLV_					0	0	0		ENST00000495706.1_1_6:44222042-44222123:-|nuORF	ENST00000495706.1_1_6:44222042-44222123:-|nuORF	ENST00000495706.1_1_6:44222042-44222123:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2777099609375	2	437.275847	872.537141	-2.0706	-0.00090544	-0.89967	-0.0003934	-2.9703	-0.0012988	437.27525866962554	27.098	0.48258	27.098	26.739	27.222	0					26	21	2	0	0	0	0.86791	1	1047	1047		28.254	1.4582	1	39708			18318	12771	12316	12325	21233	21233					0.095773489136036
IPAGTEQGWA	10	Unmodified	_IPAGTEQGWA_					0	0	0			REV__ENSG00000101310|ENST00000650089|SEC23B	REV__ENSG00000101310|ENST00000650089|SEC23B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7626953125	2	515.253631	1028.49271	0.73159	0.00037696	1.3555	0.0006984	2.087	0.0010754	515.7565489195397	53.949	0.75223	54.36	54.034	54.786	0.41122					24	17	2	0	0	0	0.37624	1	5461	5461		27.882	0	1	621950	+		18319	17264	12317	12326	21234	21234					-0.020397069705268223
IPAHPKGR	8	Unmodified	_IPAHPKGR_					0	0	0			REV__ENST00000328194.7_2_11:9160490-9160769:-|nuORF	REV__ENST00000328194.7_2_11:9160490-9160769:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26434326171875	2	438.264136	874.51372	0.23628	0.00010355	-2.5171	-0.0011032	-2.2808	-0.00099961	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.85277	1	3348	3348		25.45	6.0902	1	5350400	+		18320	25092	12318	12327	21235	21235					0.07144347919654592
IPAHVLIKES	10	Unmodified	_IPAHVLIKES_					0	0	0		ENST00000336695.4_1_20:34287595-34288899:+|nuORF	ENST00000336695.4_1_20:34287595-34288899:+|nuORF	ENST00000336695.4_1_20:34287595-34288899:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8294677734375	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.86218	1	8741	8741		32.812	2.4947	1	2008100			18321	10173	12319	12328	21236	21236					0.10094577919812764
IPAIKPAEPV	10	Unmodified	_IPAIKPAEPV_					0	0	0			REV__ENSG00000226479|ENST00000426077|TMEM185B	REV__ENSG00000226479|ENST00000426077|TMEM185B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	517.8187866210938	2	517.815867	1033.61718	2.0914	0.001083	4.1108	0.0021286	6.2022	0.0032116	517.8178511070294	93.15	1.5079	93.088	92.634	94.142	-0.06144					97	35	4	0	0	0	0.86218	1	9901	9901		32.812	2.3088	1	1071700	+		18322	23745	12320	12329	21237	21237					0.10171790516778856
IPAKSFMRP	9	Unmodified	_IPAKSFMRP_					0	0	0			REV__ENSG00000155875|ENST00000380534|SAXO1	REV__ENSG00000155875|ENST00000380534|SAXO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.792724609375	2	523.794412	1045.57427	0.10464	5.4812E-05	-1.0594	-0.0005549	-0.95473	-0.00050008	523.7937253023197	18.761	0.79063	18.827	18.655	19.445	0.066298					86	39	3	0	0	0	0.7932	1	371	371		19.997	2.6318	1	603740	+		18323	20450	12321	12330	21238	21238					0.05330697187741862
IPALCPHLKL	10	Unmodified	_IPALCPHLKL_					0	0	0			REV__ENSG00000256525|ENST00000539111|POLG2	REV__ENSG00000256525|ENST00000539111|POLG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8325805664062	2	552.833537	1103.65252	0.70436	0.0003894	-0.082169	-4.5426E-05	0.62219	0.00034397	552.8335720406732	83.834	1.6836	83.982	83.396	85.079	0.14789					58	38	2	0	0	0	0.86201	1	8147	8147		24.203	2.2429	1	196450	+		18324	23909	12322	12331	21239	21239					0.10484129772953565
IPALIGGLAR	10	Unmodified	_IPALIGGLAR_					0	0	0			REV__ENSG00000134538|ENST00000256958|SLCO1B1	REV__ENSG00000134538|ENST00000256958|SLCO1B1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.85064697265625	2	490.816202	979.617851	-0.13641	-6.6952E-05	-1.4567	-0.00071496	-1.5931	-0.00078191	490.8153746767679	73.803	0.85621	74.362	74.024	74.881	0.55891					42	20	3	0	0	0	0.37624	1	8363	8363		17.365	0.89182	1	628450	+		18325	19149	12323	12332	21240	21240					0.127226299565109
IPALLLCLPL	10	Unmodified	_IPALLLCLPL_					0	0	0		ENSG00000155918|ENST00000367341|RAET1L	ENSG00000155918|ENST00000367341|RAET1L	ENSG00000155918|ENST00000367341|RAET1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.34033203125	2	533.340664	1064.66677	-0.0064483	-3.4392E-06	-0.98002	-0.00052269	-0.98647	-0.00052613	533.3400284044101	98.996	2.9551	99.219	98.699	101.65	0.22262					166	70	4	0	0	0	0.87636	1	10267	10267		12.959	0	1	2531600			18326	5352	12324	12333	21241	21241					0.1370278220124419
IPALLLCLPL	10	Unmodified	_IPALLLCLPL_					0	0	0		ENSG00000155918|ENST00000367341|RAET1L	ENSG00000155918|ENST00000367341|RAET1L	ENSG00000155918|ENST00000367341|RAET1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	533.3401489257812	2	533.340664	1064.66677	0.82147	0.00043812	-1.621	-0.00086457	-0.79958	-0.00042645	533.3397014288719	99.113	2.1038	99.27	98.724	100.83	0.15659					144	48	4	0	0	0	0.85108	1	10318	10318		19.36	1.995	1	2216600			18327	5352	12324	12333	21242	21242					0.1370278220124419
IPALLVGVLL	10	Unmodified	_IPALLVGVLL_					0	0	0		ENSG00000163328|ENST00000392552|GPR155	ENSG00000163328|ENST00000392552|GPR155	ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34515380859375	2	504.346803	1006.67905	0.11336	5.7171E-05	-3.112	-0.0015695	-2.9987	-0.0015124	504.3451867946114	55.153	1.8423	55.554	54.023	55.866	0.40101					89	43	3	0	0	0	0.85976	1	5572	5572		35.201	3.2459	1	1856800			18328	5782	12325	12334	21243	21243					0.175981419359573
IPALRRLE	8	Unmodified	_IPALRRLE_					0	0	0			REV__ENST00000563986.1_1_15:72494793-72499131:-|nuORF	REV__ENST00000563986.1_1_15:72494793-72499131:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.3080139160156	2	484.306001	966.597449	0.42451	0.00020559	3.3503	0.0016226	3.7748	0.0018282	484.3075413936151	81.231	1.0947	81.171	80.797	81.892	-0.059692					66	25	3	0	0	0	0.60357	2	8186	8174;8186		71.296	13.484	1	917240	+		18329	16539	12326	12335	21244;21245	21245					0.11281459296696994
IPAPIPGPI	9	Unmodified	_IPAPIPGPI_					0	0	0		nc|ENSG00000178928|Q8N7U7-2|TPRX1;nc|ENSG00000178928|Q8N7U7|TPRX1;ENSG00000178928|ENST00000698655|TPRX1	nc|ENSG00000178928|Q8N7U7-2|TPRX1	nc|ENSG00000178928|Q8N7U7-2|TPRX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7713623046875	2	437.773471	873.53239	-2.0028	-0.00087676	-4.2532	-0.0018619	-6.256	-0.0027387	437.7717477191302	40.214	2.554	40.591	39.609	42.163	0.3765					138	67	4	0	0	0	0.78292	1	3334	3334		29.842	1.5873	1	10119000			18330	7232	12327	12336	21246	21246					0.09056464770844741
IPCAFVSH	8	Unmodified	_IPCAFVSH_					0	0	0			REV__ENST00000507937.1_1_5:177574516-177575030:+|nuORF	REV__ENST00000507937.1_1_5:177574516-177575030:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.267578125	2	437.218006	872.421459	-0.051779	-2.2639E-05	0.93699	0.00040967	0.88521	0.00038703	437.2199387103609	50.776	0.31997	50.774	50.61	50.93	-0.0020447					19	13	2	0	0	0	0.4196	1	4314	4314		20.482	13.288	1	64162	+		18331	19975	12328	12337	21247	21247					-0.01985498208887293
IPCAFVSH	8	Unmodified	_IPCAFVSH_					0	0	0			REV__ENST00000507937.1_1_5:177574516-177575030:+|nuORF	REV__ENST00000507937.1_1_5:177574516-177575030:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2679138183594	2	437.218006	872.421459	-0.75924	-0.00033195	3.0816	0.0013473	2.3224	0.0010154	437.22052583996583	50.826	0.34993	50.803	50.64	50.99	-0.02343					21	14	2	0	0	0	0.4196	1	4425	4425		28.254	10.889	1	94700	+		18332	19975	12328	12337	21248	21248					-0.01985498208887293
IPCICALVL	9	Unmodified	_IPCICALVL_					0	0	0		nc|ENSG00000145244|Q9Y5Q5-2|CORIN;ENSG00000145244|ENST00000273857|CORIN;ENST00000502726.5_1_4:47685742-47840047:-|nuORF;ENST00000503821.5_1_4:47663725-47840047:-|nuORF	nc|ENSG00000145244|Q9Y5Q5-2|CORIN	nc|ENSG00000145244|Q9Y5Q5-2|CORIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7673034667969	2	472.769017	943.523481	-0.41041	-0.00019403	-3.2174	-0.0015211	-3.6278	-0.0017151	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.78292	1	8433	8433		29.842	0.69198	1	590200			18333	4758	12329	12338	21249	21249					0.04946031818508345
IPDEIARPMQQ	11	Unmodified	_IPDEIARPMQQ_					0	0	0			REV__nc|ENSG00000136485|P61962-2|DCAF7	REV__nc|ENSG00000136485|P61962-2|DCAF7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.2215270996094	3	433.223817	1296.64962	-0.17127	-7.4197E-05	-2.3891	-0.001035	-2.5604	-0.0011092	433.2226408831067	61.937	1.0279	61.927	61.564	62.591	-0.0094147					54	18	4	0	0	0	0.74405	1	5778	5778		23.378	3.3474	1	814390	+		18334	19314	12330	12339	21250	21250					0.013162098574866832
IPEALKAGKKV	11	Unmodified	_IPEALKAGKKV_					0	0	0		nc|ENSG00000155906|Q9NWS8-2|RMND1;ENSG00000155906|ENST00000444024|RMND1	nc|ENSG00000155906|Q9NWS8-2|RMND1	nc|ENSG00000155906|Q9NWS8-2|RMND1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.3661499023438	2	577.368798	1152.72304	-0.96039	-0.0005545	-2.9913	-0.0017271	-3.9517	-0.0022816	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.72106	1	10980	10980		28.081	0.19925	1	9850700			18335	5351	12331	12340	21251	21251					0.15279126362247553
IPEALKAGKKV	11	Unmodified	_IPEALKAGKKV_					0	0	0		nc|ENSG00000155906|Q9NWS8-2|RMND1;ENSG00000155906|ENST00000444024|RMND1	nc|ENSG00000155906|Q9NWS8-2|RMND1	nc|ENSG00000155906|Q9NWS8-2|RMND1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3662109375	2	577.368798	1152.72304	-1.363	-0.00078696	-2.7149	-0.0015675	-4.0779	-0.0023544	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.67778	1	10717	10717		35.152	7.2698	1	14386000			18336	5351	12331	12340	21252	21252					0.15279126362247553
IPEGHAPTD	9	Unmodified	_IPEGHAPTD_					0	0	0		nc|ENSG00000089472|Q9BQS7-2|HEPH;ENSG00000089472|ENST00000343002|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH	nc|ENSG00000089472|Q9BQS7-2|HEPH	nc|ENSG00000089472|Q9BQS7-2|HEPH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7227783203125	2	468.724707	935.43486	-1.5426	-0.00072307	-1.4586	-0.00068369	-3.0013	-0.0014068	468.7238949552479	88.054	0.92239	88.517	88.185	89.108	0.46312					41	22	3	0	0	0	0.7932	1	10394	10394		21.96	0.25755	1	690140			18337	1624	12332	12341	21253	21253					-0.03543968895951366
IPFDPKFITY	10	Unmodified	_IPFDPKFITY_					0	0	0		ENST00000597365.1_1_19:39880707-39881561:-|nuORF;ENST00000416728.3_1_19:39880170-39881561:-|nuORF;ENST00000595797.5_1_19:39880250-39881561:-|nuORF;nc|ENSG00000006712|Q8N7H5-3|PAF1;nc|ENSG00000006712|Q8N7H5-2|PAF1;ENSG00000006712|ENST00000221265|PAF1	ENST00000597365.1_1_19:39880707-39881561:-|nuORF	ENST00000597365.1_1_19:39880707-39881561:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	620.8343505859375	2	620.834257	1239.65396	0.25652	0.00015925	-0.0011438	-7.1013E-07	0.25537	0.00015854	620.8340763076538	79.006	1.1902	79.417	79.014	80.205	0.41059					69	27	4	0	0	0	0.045977	5	9057	9023;9032;9044;9057;9071		109.48	47.331	1	1466900			18338	710	12333	12342	21254;21255;21256;21257;21258	21257					0.04372042342720306
IPFDPKFITY	10	Unmodified	_IPFDPKFITY_					0	0	0		ENST00000597365.1_1_19:39880707-39881561:-|nuORF;ENST00000416728.3_1_19:39880170-39881561:-|nuORF;ENST00000595797.5_1_19:39880250-39881561:-|nuORF;nc|ENSG00000006712|Q8N7H5-3|PAF1;nc|ENSG00000006712|Q8N7H5-2|PAF1;ENSG00000006712|ENST00000221265|PAF1	ENST00000597365.1_1_19:39880707-39881561:-|nuORF	ENST00000597365.1_1_19:39880707-39881561:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.8343505859375	2	620.834257	1239.65396	0.57273	0.00035557	-0.40059	-0.0002487	0.17214	0.00010687	620.833872421237	78.881	1.1483	79.43	79.107	80.256	0.54945					72	26	4	0	0	0	0.081562	4	9044	9044;9054;9064;9078		104.01	47.58	1	1400800			18339	710	12333	12342	21259;21260;21261;21262	21259					0.04372042342720306
IPFEFPLHL	9	Unmodified	_IPFEFPLHL_					0	0	0		ENST00000492514.1_1_21:38610748-38639601:-|nuORF;ENST00000475009.1_1_21:38610748-38639643:-|nuORF;ENST00000480452.5_1_21:38605608-38639601:-|nuORF;ENST00000399000.7_1_21:38604874-38639643:-|nuORF;nc|ENSG00000157538|O14972-2|VPS26C;ENSG00000157538|ENST00000309117|VPS26C	ENST00000492514.1_1_21:38610748-38639601:-|nuORF	ENST00000492514.1_1_21:38610748-38639601:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.8107299804688	2	556.810585	1111.60662	1.3571	0.00075565	-1.2842	-0.00071504	0.072925	4.0605E-05	556.8098208940825	91.993	0.97783	92.441	92.096	93.074	0.44769					48	22	3	0	0	0	0.043636	4	10927	10927;10940;10952;10964		110.34	47.633	1	506940			18340	5436	12334	12343	21263;21264;21265;21266	21263					0.055278078623587135
IPFEFPLHL	9	Unmodified	_IPFEFPLHL_					0	0	0		ENST00000492514.1_1_21:38610748-38639601:-|nuORF;ENST00000475009.1_1_21:38610748-38639643:-|nuORF;ENST00000480452.5_1_21:38605608-38639601:-|nuORF;ENST00000399000.7_1_21:38604874-38639643:-|nuORF;nc|ENSG00000157538|O14972-2|VPS26C;ENSG00000157538|ENST00000309117|VPS26C	ENST00000492514.1_1_21:38610748-38639601:-|nuORF	ENST00000492514.1_1_21:38610748-38639601:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.8099975585938	2	556.810585	1111.60662	-0.80528	-0.00044839	0.92261	0.00051372	0.11733	6.5329E-05	556.8109954092557	92.088	1.0163	92.55	92.235	93.251	0.46249					49	23	3	0	0	0	0.080198	4	11023	10981;10997;11009;11023		97.473	49.815	1	458580			18341	5436	12334	12343	21267;21268;21269;21270	21270					0.055278078623587135
IPFGQDHGP	9	Unmodified	_IPFGQDHGP_					0	0	0		nc|ENSG00000154743|Q8NCE0-5|TSEN2;nc|ENSG00000154743|Q8NCE0-4|TSEN2;nc|ENSG00000154743|Q8NCE0-3|TSEN2;nc|ENSG00000154743|Q8NCE0-2|TSEN2;ENSG00000154743|ENST00000284995|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.23602294921875	2	484.235242	966.45593	-1.5617	-0.00075625	3.3216	0.0016084	1.7598	0.00085217	484.2368161920654	85.001	0.56653	85.15	84.753	85.32	0.14952					43	12	4	0	0	0	0.51307	1	8259	8259		51.335	3.4199	1	1708900			18342	5293	12335	12344	21271	21271					-0.028639587964335078
IPFGQDHGP	9	Unmodified	_IPFGQDHGP_					0	0	0		nc|ENSG00000154743|Q8NCE0-5|TSEN2;nc|ENSG00000154743|Q8NCE0-4|TSEN2;nc|ENSG00000154743|Q8NCE0-3|TSEN2;nc|ENSG00000154743|Q8NCE0-2|TSEN2;ENSG00000154743|ENST00000284995|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2358703613281	2	484.235242	966.45593	-0.10809	-5.2342E-05	0.70974	0.00034368	0.60165	0.00029134	484.2359966972615	84.849	1.21	85.289	84.903	86.113	0.43967					128	29	6	0	0	0	0.51307	1	9895	9895		51.335	1.3109	1	48653000			18343	5293	12335	12344	21272	21272					-0.028639587964335078
IPFGQDHGP	9	Unmodified	_IPFGQDHGP_					0	0	0		nc|ENSG00000154743|Q8NCE0-5|TSEN2;nc|ENSG00000154743|Q8NCE0-4|TSEN2;nc|ENSG00000154743|Q8NCE0-3|TSEN2;nc|ENSG00000154743|Q8NCE0-2|TSEN2;ENSG00000154743|ENST00000284995|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23626708984375	2	484.235242	966.45593	-0.53754	-0.00026029	1.2282	0.00059475	0.69069	0.00033445	484.2362894528465	84.849	1.2824	85.296	84.912	86.194	0.44736					130	31	5	0	0	0	0.22631	1	9952	9952		71.296	15.791	1	48085000			18344	5293	12335	12344	21273	21273					-0.028639587964335078
IPFGQDHGP	9	Unmodified	_IPFGQDHGP_					0	0	0		nc|ENSG00000154743|Q8NCE0-5|TSEN2;nc|ENSG00000154743|Q8NCE0-4|TSEN2;nc|ENSG00000154743|Q8NCE0-3|TSEN2;nc|ENSG00000154743|Q8NCE0-2|TSEN2;ENSG00000154743|ENST00000284995|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2365417480469	2	484.235242	966.45593	-1.0641	-0.00051528	2.6228	0.0012701	1.5587	0.00075477	484.2366198797029	86.871	1.6056	87.325	87.019	88.625	0.45429					96	38	4	0	0	0	0.28875	1	10234	10234		65.803	0	1	9271700			18345	5293	12335	12344	21274	21274					-0.028639587964335078
IPFGQDHGP	9	Unmodified	_IPFGQDHGP_					0	0	0		nc|ENSG00000154743|Q8NCE0-5|TSEN2;nc|ENSG00000154743|Q8NCE0-4|TSEN2;nc|ENSG00000154743|Q8NCE0-3|TSEN2;nc|ENSG00000154743|Q8NCE0-2|TSEN2;ENSG00000154743|ENST00000284995|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	484.235242	966.45593	-1.0245	-0.0004961	3.2397	0.0015688	2.2152	0.0010727	484.23662727476966	87.735	0.562	87.735	87.555	88.117	0	0.23534	0.0008091	NaN	65.803	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135530			18346	5293	12335	12344							-0.028639587964335078
IPFIKLANN	9	Unmodified	_IPFIKLANN_					0	0	0		ENST00000480552.5_1_7:140156054-140156144:-|nuORF	ENST00000480552.5_1_7:140156054-140156144:-|nuORF	ENST00000480552.5_1_7:140156054-140156144:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.309814453125	2	515.30821	1028.60187	-0.67918	-0.00034999	4.0041	0.0020634	3.325	0.0017134	515.3101163931515	57.417	1.3734	57.811	57.026	58.399	0.39407					93	33	4	0	0	0	0.43338	1	5986	5986		55.504	4.3115	1	3241100			18347	12440	12336	12345	21275	21275					0.08870923719609891
IPFIKLANN	9	Unmodified	_IPFIKLANN_					0	0	0		ENST00000480552.5_1_7:140156054-140156144:-|nuORF	ENST00000480552.5_1_7:140156054-140156144:-|nuORF	ENST00000480552.5_1_7:140156054-140156144:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3102416992188	2	515.30821	1028.60187	0.22794	0.00011746	2.7764	0.0014307	3.0044	0.0015482	515.3094745743989	58.428	1.0687	58.981	58.387	59.456	0.55323					69	25	3	0	0	0	0.62081	1	6092	6092		45.952	2.3259	1	3949400			18348	12440	12336	12345	21276	21276					0.08870923719609891
IPFIKLANN	9	Unmodified	_IPFIKLANN_					0	0	0		ENST00000480552.5_1_7:140156054-140156144:-|nuORF	ENST00000480552.5_1_7:140156054-140156144:-|nuORF	ENST00000480552.5_1_7:140156054-140156144:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3094482421875	2	515.30821	1028.60187	-0.31027	-0.00015988	3.4472	0.0017764	3.1369	0.0016165	515.309789573958	59.477	1.1647	60.03	59.456	60.621	0.55323					75	29	3	0	0	0	0.62081	1	6249	6249		45.952	3.0877	1	1098000			18349	12440	12336	12345	21277	21277					0.08870923719609891
IPFPLLLIQR	10	Unmodified	_IPFPLLLIQR_					0	0	0			REV__ENST00000378962.3_1_X:30578303-30578414:-|nuORF	REV__ENST00000378962.3_1_X:30578303-30578414:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92962646484375	3	403.928781	1208.76451	-1.067	-0.00043099	2.3128	0.0009342	1.2458	0.00050321	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.86151	1	4065	4065		15.333	6.1213	1	5907700	+		18350	25908	12337	12346	21278	21278					0.16848307121586004
IPFPNVLPDF	10	Unmodified	_IPFPNVLPDF_					0	0	0		nc|ENSG00000136205|Q68CZ2-2|TNS3;ENSG00000136205|ENST00000311160|TNS3	nc|ENSG00000136205|Q68CZ2-2|TNS3	nc|ENSG00000136205|Q68CZ2-2|TNS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	579.814208984375	2	579.813325	1157.6121	2.4302	0.0014091	-1.3631	-0.00079033	1.0671	0.00061873	580.3141065968915	103.26	0.39805	103.52	103.23	103.63	0.26524					15	9	2	0	0	0	0.82886	1	12590	12590		37.812	4.9991	1	465160			18351	4096	12338	12347	21279	21279					0.039594866541847296
IPFPNVLPDF	10	Unmodified	_IPFPNVLPDF_					0	0	0		nc|ENSG00000136205|Q68CZ2-2|TNS3;ENSG00000136205|ENST00000311160|TNS3	nc|ENSG00000136205|Q68CZ2-2|TNS3	nc|ENSG00000136205|Q68CZ2-2|TNS3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	579.813325	1157.6121	0.70807	0.00041055	0.15075	8.7409E-05	0.85882	0.00049796	579.8133161332672	103.17	0.5717	103.4	103.27	103.84	0.22556	-0.063571	0.0010738	NaN	37.812	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	292840			18352	4096	12338	12347							0.039594866541847296
IPGAAEKPK	9	Unmodified	_IPGAAEKPK_					0	0	0		ENSG00000075218|ENST00000454366|GTSE1	ENSG00000075218|ENST00000454366|GTSE1	ENSG00000075218|ENST00000454366|GTSE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3013916015625	2	455.77146	909.528367	-0.56257	-0.0002564	3.9822	0.001815	3.4196	0.0015586	455.7717754286587	34.717	0.51252	34.723	34.385	34.898	0.0063896					14	12	2	0	0	0	0.20789	1	2123	2123		44.117	16.235	1	23358			18353	1323	12339	12348	21280	21280					0.06998375277134983
IPGILKPE	8	Unmodified	_IPGILKPE_					0	0	0		ENST00000324366.12_2_14:23394145-23394196:-|nuORF	ENST00000324366.12_2_14:23394145-23394196:-|nuORF	ENST00000324366.12_2_14:23394145-23394196:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.771240234375	2	433.770929	865.527304	1.1273	0.000489	3.9094	0.0016958	5.0367	0.0021848	433.77107498521286	32.677	1.3148	32.889	32.337	33.651	0.21168					85	30	4	0	0	0	0.82464	1	2332	2332		21.702	1.2205	1	1051100			18354	10060	12340	12349	21281	21281					0.08916160908222537
IPGKMKKA	8	Unmodified	_IPGKMKKA_					0	0	0			REV__nc|ENSG00000141219|Q9BSJ5-2|MTNAP1	REV__nc|ENSG00000141219|Q9BSJ5-2|MTNAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.77423095703125	2	436.772948	871.531344	-0.34986	-0.00015281	1.4315	0.00062523	1.0816	0.00047242	436.77383375696394	27.418	1.1225	27.379	27.041	28.164	-0.038523					45	25	2	0	0	0	0.82419	1	1271	1271		13.775	1.5685	1	85606	+		18355	19667	12341	12350	21282	21282					0.0904392713028983
IPGLGRITG	9	Unmodified	_IPGLGRITG_					0	0	0		ENSG00000203837|ENST00000369230|PNLIPRP3	ENSG00000203837|ENST00000369230|PNLIPRP3	ENSG00000203837|ENST00000369230|PNLIPRP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.27093505859375	2	442.271627	882.528701	-0.83468	-0.00036915	-0.31464	-0.00013916	-1.1493	-0.00050831	442.2714568018733	84.382	2.5266	84.818	83.748	86.275	0.43538					144	61	4	0	0	0	0.67345	1	9881	9881		42.396	1.8235	1	3031500			18356	8395	12342	12351	21283	21283					0.08273794996989636
IPGLTLYS	8	Unmodified	_IPGLTLYS_					0	0	0		nc|ENSG858|P60608|ERVFC1-1	nc|ENSG858|P60608|ERVFC1-1	nc|ENSG858|P60608|ERVFC1-1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.2461242675781	2	432.247286	862.48002	-1.0325	-0.00044629	0.17629	7.6202E-05	-0.8562	-0.00037009	432.2475175582521	98.287	1.1701	98.287	97.806	98.976	0					69	28	4	0	0	0	0.86791	2	9918	9869;9918		44.531	2.0566	1	659880			18357	15365	12343	12352	21284;21285	21285					0.04327881637232167
IPGLTLYS	8	Unmodified	_IPGLTLYS_					0	0	0		nc|ENSG858|P60608|ERVFC1-1	nc|ENSG858|P60608|ERVFC1-1	nc|ENSG858|P60608|ERVFC1-1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.24609375	2	432.247286	862.48002	-0.17074	-7.3802E-05	-0.81396	-0.00035183	-0.9847	-0.00042564	432.24716926494176	98.219	1.1881	98.276	97.88	99.068	0.056839					57	26	3	0	0	0	0.9159	1	10391	10391		44.531	9.3304	1	388720			18358	15365	12343	12352	21286	21286					0.04327881637232167
IPGLTLYS	8	Unmodified	_IPGLTLYS_					0	0	0		nc|ENSG858|P60608|ERVFC1-1	nc|ENSG858|P60608|ERVFC1-1	nc|ENSG858|P60608|ERVFC1-1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.2456359863281	2	432.247286	862.48002	-1.5831	-0.0006843	1.0335	0.00044675	-0.54957	-0.00023755	432.2477437889501	97.848	1.4004	98.075	97.569	98.969	0.22788					76	31	5	0	0	0	0.9159	1	10172	10172		44.531	7.5026	1	626180			18359	15365	12343	12352	21287	21287					0.04327881637232167
IPGLTLYS	8	Unmodified	_IPGLTLYS_					0	0	0		nc|ENSG858|P60608|ERVFC1-1	nc|ENSG858|P60608|ERVFC1-1	nc|ENSG858|P60608|ERVFC1-1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.24688720703125	2	432.247286	862.48002	-1.8339	-0.00079269	1.4654	0.00063343	-0.36844	-0.00015926	432.24785776580563	97.992	1.1927	98.188	97.805	98.997	0.19585					63	26	3	0	0	0	0.9159	1	10101	10101		44.531	7.5026	1	609590			18360	15365	12343	12352	21288	21288					0.04327881637232167
IPGLTLYS	8	Unmodified	_IPGLTLYS_					0	0	0		nc|ENSG858|P60608|ERVFC1-1	nc|ENSG858|P60608|ERVFC1-1	nc|ENSG858|P60608|ERVFC1-1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.2470397949219	2	432.247286	862.48002	1.6286	0.00070397	-2.2133	-0.00095671	-0.58472	-0.00025274	432.24636827465696	97.973	1.4306	98.35	97.873	99.304	0.37679					103	34	5	0	0	0	0.9159	1	11810	11810		44.531	2.0566	1	6519900			18361	15365	12343	12352	21289	21289					0.04327881637232167
IPGPPVCVIV	10	Carbamidomethyl (C)	_IPGPPVC(Carbamidomethyl (C))VIV_	IPGPPVC(1)VIV		IPGPPVC(55)VIV		0	1	0		ENST00000232375.7_1_3:48556966-48557164:-|nuORF	ENST00000232375.7_1_3:48556966-48557164:-|nuORF	ENST00000232375.7_1_3:48556966-48557164:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8062744140625	2	525.804445	1049.59434	1.1236	0.00059082	2.6573	0.0013972	3.7809	0.001988	525.8056699981385	18.297	0.37172	17.82	17.611	17.983	-0.47694					19	7	3	0	0	0	0.51323	1	379	379		54.765	14.192	1	331790			18362	9216	12344	12353	21290	21290	117				0.07152448127681055
IPGPTGAGELF	11	Unmodified	_IPGPTGAGELF_					0	0	0			REV__ENST00000586582.5_1_19:4559588-4559762:-|nuORF	REV__ENST00000586582.5_1_19:4559588-4559762:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7817993164062	2	529.779482	1057.54441	0.45896	0.00024315	2.7019	0.0014314	3.1609	0.0016746	529.7806261653575	52.825	1.5318	53.249	52.638	54.169	0.42348					117	36	6	0	0	0	0.5603	1	5249	5249		47.657	6.8792	1	6482700	+		18363	29109	12345	12354	21291	21291					0.017940367233904908
IPGRAKKP	8	Unmodified	_IPGRAKKP_					0	0	0			REV__ENSG00000235699|ENST00000438525|CXorf51B	REV__ENSG00000235699|ENST00000438525|CXorf51B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.28643798828125	2	433.782162	865.549771	-0.010776	-4.6744E-06	-4.0354	-0.0017505	-4.0462	-0.0017552	433.78115138299034	48.016	2.1588	48.939	48.356	50.515	0.92315					218	53	5	0	0	0	0.4196	1	4815	4815		1.3276	0	1	5107800	+		18364	23733	12346	12355	21292	21292					0.11161805096503485
IPGVGNIH	8	Unmodified	_IPGVGNIH_					0	0	0		ENSG00000186166|ENST00000334418|CENATAC;ENST00000583842.1_1_11:118882763-118885798:+|nuORF;ENST00000580556.5_1_11:118881994-118885036:+|nuORF;ENST00000532132.5_1_11:118881994-118886068:+|nuORF	ENSG00000186166|ENST00000334418|CENATAC	ENSG00000186166|ENST00000334418|CENATAC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.7305908203125	2	403.729595	805.444637	1.7257	0.0006967	0.41632	0.00016808	2.142	0.00086478	403.7296654256628	99.693	1.8198	100.06	99.055	100.87	0.36292					95	45	3	0	0	0	0.88915	1	12092	12092		35.201	5.3592	1	752370			18365	7778	12347	12356	21293	21293					0.03413263900097263
IPHDETSIL	9	Unmodified	_IPHDETSIL_					0	0	0			REV__ENSG00000066185|ENST00000372565|ZMYND12	REV__ENSG00000066185|ENST00000372565|ZMYND12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7691040039062	2	512.769114	1023.52368	-0.5023	-0.00025756	0.034974	1.7934E-05	-0.46732	-0.00023963	512.7690290219534	48.59	1.7173	49.06	48.082	49.799	0.46941					100	42	5	0	0	0	0.22537	1	4692	4692		71.378	2.8932	1	5404400	+		18366	16518	12348	12357	21294	21294					0.01285446343717922
IPHVARFQH	9	Unmodified	_IPHVARFQH_					0	0	0		ENSG00000160959|ENST00000292524|LRRC14	ENSG00000160959|ENST00000292524|LRRC14	ENSG00000160959|ENST00000292524|LRRC14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8059692382812	2	552.8067	1103.59885	-0.25876	-0.00014305	2.6735	0.0014779	2.4147	0.0013349	552.8082663100047	67.983	0.75287	68.532	68.072	68.825	0.54819					33	17	2	0	0	0	0.20789	1	7452	7452		40.573	16.37	1	297840			18367	5620	12349	12358	21295	21295					0.05119093385474116
IPIFGTANY	9	Unmodified	_IPIFGTANY_					0	0	0		nc|ENSG00000280411|A0A0B4J2H0|IGHV1-69D;nc|ENSG00000211973|P01742|IGHV1-69	nc|ENSG00000280411|A0A0B4J2H0|IGHV1-69D	nc|ENSG00000280411|A0A0B4J2H0|IGHV1-69D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.2642517089844	2	498.263468	994.512382	-0.17905	-8.9212E-05	0.23732	0.00011825	0.05827	2.9034E-05	498.2634727658034	78.134	0.66336	78.698	78.416	79.079	0.56332					27	15	2	0	0	0	0.073112	2	8948	8948;8953		99.375	30.483	1	398680			18368	15244	12350	12359	21296;21297	21296					0.014906690402199274
IPIFGTANY	9	Unmodified	_IPIFGTANY_					0	0	0		nc|ENSG00000280411|A0A0B4J2H0|IGHV1-69D;nc|ENSG00000211973|P01742|IGHV1-69	nc|ENSG00000280411|A0A0B4J2H0|IGHV1-69D	nc|ENSG00000280411|A0A0B4J2H0|IGHV1-69D	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	498.263468	994.512382	-0.45903	-0.00022872	0.70305	0.00035031	0.24402	0.00012159	498.263615059971	78.143	0.79356	78.549	78.343	79.137	0.40531	-0.074495	0.00024914	NaN	99.375	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	240450			18369	15244	12350	12359							0.014906690402199274
IPIIPKDT	8	Unmodified	_IPIIPKDT_					0	0	0		ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.7784423828125	2	448.776211	895.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.617	1	67.582	67.082	68.082	-0.035698								0	0	0	0.29344	1	6495	6495		31.955	0	1				18370	5338	12351	12360	21298	21298					0.08592143562668753
IPIPTLKDF	9	Unmodified	_IPIPTLKDF_					0	0	0		ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.3098754882812	2	522.310418	1042.60628	0.79738	0.00041648	-1.4107	-0.0007368	-0.61328	-0.00032032	522.3095528626822	76.545	0.58643	76.945	76.532	77.119	0.3997					25	15	2	0	0	0	0.24527	1	8688	8688		69.628	16.276	1	274280			18371	4304	12352	12361	21299	21299					0.08668388142518779
IPIPTLKDF	9	Unmodified	_IPIPTLKDF_					0	0	0		ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.3099975585938	2	522.310418	1042.60628	0.0053543	2.7966E-06	-0.572	-0.00029876	-0.56664	-0.00029596	522.3100319960748	76.227	0.78168	76.795	76.433	77.215	0.56836					31	21	2	0	0	0	0.038282	1	8704	8704		113.41	25.657	1	206330			18372	4304	12352	12361	21300	21300					0.08668388142518779
IPIRIGGF	8	Unmodified	_IPIRIGGF_					0	0	0			REV__nc|ENSG00000158865|Q8WWX8-3|SLC5A11	REV__nc|ENSG00000158865|Q8WWX8-3|SLC5A11	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.76995849609375	2	436.771263	871.527973	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.856	1	20.791	20.291	21.291	-0.064743								0	0	0	0.29871	1	566	566		23.037	1.3344	1		+		18373	20627	12353	12362	21301	21301					0.0870700034794254
IPIRIGGF	8	Unmodified	_IPIRIGGF_					0	0	0			REV__nc|ENSG00000158865|Q8WWX8-3|SLC5A11	REV__nc|ENSG00000158865|Q8WWX8-3|SLC5A11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7744445800781	2	436.771263	871.527973	1.76	0.0007687	3.0034	0.0013118	4.7633	0.0020805	436.7727883819092	27.072	0.66235	27.045	26.605	27.267	-0.027706					26	16	2	0	0	0	0.87276	1	1195	1195		29.842	0	1	43317	+		18374	20627	12353	12362	21302	21302					0.0870700034794254
IPIRKAIEFAK	11	Unmodified	_IPIRKAIEFAK_					0	0	0			REV__nc|ENSG00000037749|P55082-2|MFAP3;REV__nc|ENSG00000198948|O75121-2|MFAP3L	REV__nc|ENSG00000037749|P55082-2|MFAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4049072265625	2	643.403173	1284.79179	2.6785	0.0017233	1.5954	0.0010265	4.2739	0.0027498	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.72106	1	11800	11800		28.081	1.3886	1	14704000	+		18375	16298;23426	12354	12363	21303	21303					0.16078790661981657
IPIRKAIEFAK	11	Unmodified	_IPIRKAIEFAK_					0	0	0			REV__nc|ENSG00000037749|P55082-2|MFAP3;REV__nc|ENSG00000198948|O75121-2|MFAP3L	REV__nc|ENSG00000037749|P55082-2|MFAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4039306640625	2	643.403173	1284.79179	2.6792	0.0017238	3.2892	0.0021163	5.9684	0.0038401	643.4052640495355	107.03	1.0145	106.99	106.79	107.81	-0.034134					59	23	3	0	0	0	0.70737	2	11836	11836;11920		30.318	4.7437	1	2103900	+		18376	16298;23426	12354	12363	21304;21305	21304					0.16078790661981657
IPIRKAIEFAK	11	Unmodified	_IPIRKAIEFAK_					0	0	0			REV__nc|ENSG00000037749|P55082-2|MFAP3;REV__nc|ENSG00000198948|O75121-2|MFAP3L	REV__nc|ENSG00000037749|P55082-2|MFAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4049682617188	2	643.403173	1284.79179	1.7783	0.0011441	2.5766	0.0016578	4.3549	0.0028019	643.4046886151041	105.77	1.7293	105.8	105.04	106.77	0.038322					167	40	5	0	0	0	0.638	1	11619	11619		40.058	12.176	1	14066000	+		18377	16298;23426	12354	12363	21306	21306					0.16078790661981657
IPIVLISQ	8	Unmodified	_IPIVLISQ_					0	0	0		ENSG00000258453|ENST00000556246|OR11H2;ENSG00000130538|ENST00000643195|OR11H1;nc|ENSG00000258453|Q8NH07|OR11H2;nc|ENSG00000130538|Q8NG94|OR11H1;ENSG00000257115|ENST00000550708|OR11H12	ENSG00000258453|ENST00000556246|OR11H2	ENSG00000258453|ENST00000556246|OR11H2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.787841796875	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.80308	1	3415	3415		16.473	0.83693	1	325400			18378	3653	12355	12364	21307	21307					0.11308733942325944
IPKFMPPA	8	Unmodified	_IPKFMPPA_					0	0	0			REV__nc|ENSG00000196313|Q96HA1-2|POM121	REV__nc|ENSG00000196313|Q96HA1-2|POM121	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7538757324219	2	450.754224	899.493896	-0.14159	-6.3823E-05	-0.059905	-2.7002E-05	-0.2015	-9.0825E-05	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.88915	1	7753	7753		35.201	1.7077	1	109620	+		18379	23115	12356	12365	21308	21308					0.040128358646711604
IPKGNKDY	8	Unmodified	_IPKGNKDY_					0	0	0			REV__ENSG00000180269|ENST00000570682|GPR139	REV__ENSG00000180269|ENST00000570682|GPR139	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.7530822753906	2	467.753267	933.491981	-1.5655	-0.00073227	1.4243	0.00066624	-0.14117	-6.6032E-05	467.75393782612105	56.605	0.85083	56.605	56.397	57.248	0					52	39	2	0	0	0	0.88601	1	4854	4854		34.173	5.9183	1	386030	+		18380	22386	12357	12366	21309	21309					0.022574983804133808
IPKGTDVI	8	Unmodified	_IPKGTDVI_					0	0	0		ENSG00000197446|ENST00000331105|CYP2F1	ENSG00000197446|ENST00000331105|CYP2F1	ENSG00000197446|ENST00000331105|CYP2F1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7529602050781	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.483	1	74.439	73.939	74.939	-0.043877								0	0	0	0.29452	1	7311	7311		33.516	1.5607	1				18381	8165	12358	12367	21310	21310					0.06383284011508294
IPKKFILY	8	Unmodified	_IPKKFILY_					0	0	0			REV__ENST00000370487.4_1_20:61431489-61431786:+|nuORF	REV__ENST00000370487.4_1_20:61431489-61431786:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.3271484375	2	511.325871	1020.63719	0.7825	0.00040011	1.6612	0.00084941	2.4437	0.0012495	511.32659948169965	97.129	2.2022	97.292	96.878	99.081	0.16316					131	50	4	0	0	0	0.81548	2	10029	10029;10065		33.516	13.034	1	1350400	+		18382	25655	12359	12368	21311;21312	21311					0.12769586247407005
IPKKPLRGRG	10	Unmodified	_IPKKPLRGRG_					0	0	0		ENSG00000116544|ENST00000373347|DLGAP3	ENSG00000116544|ENST00000373347|DLGAP3	ENSG00000116544|ENST00000373347|DLGAP3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.3636474609375	2	561.366924	1120.7193	-1.2272	-0.00068889	-4.3413	-0.0024371	-5.5685	-0.003126	561.3643862619919	45.972	0.98896	45.972	45.502	46.491	0					58	25	3	0	0	0	0.85466	1	3404	3404		20.947	2.6225	1	208060			18383	2925	12360	12369	21313	21313					0.1637650137906803
IPKPLNKILPP	11	Unmodified	_IPKPLNKILPP_					0	0	0			REV__nc|ENSG00000135341|O43318-4|MAP3K7	REV__nc|ENSG00000135341|O43318-4|MAP3K7	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.4035034179688	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.169	1	22.234	21.734	22.734	0.064745								0	0	0	0.56276	1	652	652		9.7057	0.52274	1		+		18384	15894	12361	12370	21314	21314					0.18548576293073893
IPKQKPVQT	9	Unmodified	_IPKQKPVQT_					0	0	0		ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	519.2608642578125	2	519.818941	1037.62333	-0.85745	-0.00044572	-1.3184	-0.00068535	-2.1759	-0.0011311	520.3200458382677	86.407	0.26104	86.407	86.212	86.473	0					8	5	2	0	0	0	0.20789	1	8233	8233		10.866	4.9445	1	28315			18385	4304	12362	12371	21315	21315					0.10602308748320866
IPKQKPVQT	9	Unmodified	_IPKQKPVQT_					0	0	0		ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	519.818941	1037.62333	-0.23134	-0.00012025	-1.8633	-0.00096859	-2.0947	-0.0010888	519.8180616248669	86.448	0.8017	86.642	86.217	87.019	0.19379	0.066463	-0.00025421	NaN	10.265	34	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	196540			18386	4304	12362	12371							0.10602308748320866
IPKQKPVQT	9	Unmodified	_IPKQKPVQT_					0	0	0		ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	519.818941	1037.62333	0.69425	0.00036088	-2.838	-0.0014753	-2.1438	-0.0011144	519.8176178784387	86.48	0.92641	86.629	86.237	87.164	0.14902	0.053725	-0.0012675	NaN	10.265	39	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150910			18387	4304	12362	12371							0.10602308748320866
IPKSGFLIN	9	Unmodified	_IPKSGFLIN_					0	0	0		ENST00000555759.1_1_14:95904955-95916441:-|nuORF;nc|ENSG00000176438|Q6ZMZ3-2|SYNE3;ENSG00000176438|ENST00000682763|SYNE3	ENST00000555759.1_1_14:95904955-95916441:-|nuORF	ENST00000555759.1_1_14:95904955-95916441:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7950439453125	2	494.794935	987.575317	-1.3308	-0.00065846	1.2502	0.00061859	-0.080595	-3.9878E-05	494.7953589400389	59.726	1.0377	60.116	59.651	60.688	0.39077					51	26	3	0	0	0	0.21969	1	6278	6278		71.877	2.2498	1	698020			18388	7080	12363	12372	21316	21316					0.08103234828274708
IPLEKREL	8	Unmodified	_IPLEKREL_					0	0	0		nc|ENSG00000064692|Q9Y6H5-4|SNCAIP;ENSG00000064692|ENST00000261368|SNCAIP;nc|ENSG00000064692|Q9Y6H5-3|SNCAIP;nc|ENSG00000064692|Q9Y6H5-5|SNCAIP;ENST00000512146.6_1_5:121736783-121799188:+|nuORF;nc|ENSG00000064692|Q9Y6H5-2|SNCAIP	nc|ENSG00000064692|Q9Y6H5-4|SNCAIP	nc|ENSG00000064692|Q9Y6H5-4|SNCAIP	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.3064880371094	2	499.305667	996.596781	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.988	1	52.985	52.485	53.485	-0.0033035								0	0	0	0.29498	1	4610	4610		26.796	1.222	1				18389	1109	12364	12373	21317	21317					0.09834619856997051
IPLIMIKK	8	Unmodified	_IPLIMIKK_					0	0	0		ENST00000510832.5_1_4:189458328-189458415:+|nuORF	ENST00000510832.5_1_4:189458328-189458415:+|nuORF	ENST00000510832.5_1_4:189458328-189458415:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3135681152344	2	478.322274	954.629995	-0.79522	-0.00038037	-2.1596	-0.001033	-2.9548	-0.0014133	478.32116753277586	21.398	3.5592	20.769	19.306	22.865	-0.62835					113	87	2	0	0	0	0.4196	1	646	646		14.664	5.1935	1	114880			18390	13011	12365	12374	21318	21318					0.15086530375344864
IPLPIRNKTLS	11	Unmodified	_IPLPIRNKTLS_					0	0	0		ENSG00000102805|ENST00000377453|CLN5	ENSG00000102805|ENST00000377453|CLN5	ENSG00000102805|ENST00000377453|CLN5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3911743164062	2	626.392805	1250.77106	6.5284	0.0040894	-0.081087	-5.0792E-05	6.4474	0.0040386	626.3926332605848	110.43	0.80482	110.5	110.23	111.04	0.068001					53	30	2	0	0	0	0.73893	1	13410	13410		24.519	2.5593	1	332460			18391	2022	12366	12375	21319	21319					0.15570200282331825
IPLPLPQPN	9	Unmodified	_IPLPLPQPN_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2	nc|ENSG00000163520|P98095|FBLN2	nc|ENSG00000163520|P98095|FBLN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.79498291015625	2	494.794935	987.575317	-0.71818	-0.00035535	0.5403	0.00026734	-0.17788	-8.8012E-05	494.794924428077	59.527	1.1168	60.08	59.775	60.891	0.55323					46	29	3	0	0	0	0.39977	1	6324	6324		57.811	1.0902	1	901690			18392	5814	12367	12376	21320	21320					0.08103234828274708
IPLQPMPVA	9	Unmodified	_IPLQPMPVA_					0	0	0		nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4;ENSG00000151062|ENST00000382722|CACNA2D4;nc|ENSG00000151062|Q7Z3S7-5|CACNA2D4	nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4	nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.23760986328125	2	483.278063	964.541574	-2.8998	-0.0014014	3.6643	0.0017709	0.76445	0.00036944	483.2801557367861	39.784	0.47272	39.794	39.513	39.986	0.0092773					15	10	2	0	0	0	0.20789	1	2801	2801		33.516	0	1	73330			18393	5090	12368	12377	21321	21321					0.057884900648673465
IPLRAWLY	8	Unmodified	_IPLRAWLY_					0	0	0		nc|ENSG00000131044|Q3SXZ7-2|TTLL9;nc|ENSG00000131044|Q3SXZ7-3|TTLL9	nc|ENSG00000131044|Q3SXZ7-2|TTLL9;nc|ENSG00000131044|Q3SXZ7-3|TTLL9	nc|ENSG00000131044|Q3SXZ7-2|TTLL9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7717895507812	2	516.30547	1030.59639	-0.50307	-0.00025974	-0.67154	-0.00034672	-1.1746	-0.00060646	516.805564810026	71.961	0.2476	72.347	72.251	72.499	0.38582					6	5	2	0	0	0	0.4196	1	8043	8043		20.482	0	1	64211			18394	14912;14913	12369	12378	21322	21322					0.08231244927810621
IPLRGKARSR	10	Unmodified	_IPLRGKARSR_					0	0	0			REV__ENSG00000092445|ENST00000263798|TYRO3	REV__ENSG00000092445|ENST00000263798|TYRO3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3101806640625	2	577.367456	1152.72036	-0.31063	-0.00017935	0.43493	0.00025112	0.1243	7.1768E-05	577.8694492752616	111.03	0.5499	111.03	110.75	111.3	0					27	17	2	0	0	0	0.37624	1	11527	11527		26.693	5.746	1	49290	+		18395	17034	12370	12379	21323	21323					0.1501071574798516
IPLSIIIALP	10	Unmodified	_IPLSIIIALP_					0	0	0			REV__ENSG00000103257|ENST00000261622|SLC7A5	REV__ENSG00000103257|ENST00000261622|SLC7A5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.2540893554688	2	525.352086	1048.68962	-0.61473	-0.00032295	2.7212	0.0014296	2.1065	0.0011067	525.3534846191474	38.087	1.1471	38.037	37.451	38.598	-0.050369					40	25	2	0	0	0	0.37624	1	2663	2663		15.642	12.232	1	59432	+		18396	17401	12371	12380	21324	21324					0.1672212459036473
IPLSIIIALP	10	Unmodified	_IPLSIIIALP_					0	0	0			REV__ENSG00000103257|ENST00000261622|SLC7A5	REV__ENSG00000103257|ENST00000261622|SLC7A5	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	525.352086	1048.68962	-1.5331	-0.0008054	3.8601	0.0020279	2.327	0.0012225	525.3539262614607	37.862	0.57975	37.862	37.796	38.376	0	-0.13506	0.00084175	NaN	15.642	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36092	+		18397	17401	12371	12380							0.1672212459036473
IPLSRERKGR	10	Unmodified	_IPLSRERKGR_					0	0	0		ENST00000313064.2_1_2:232373960-232378287:-|nuORF	ENST00000313064.2_1_2:232373960-232378287:-|nuORF	ENST00000313064.2_1_2:232373960-232378287:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	606.368896484375	2	606.370195	1210.72584	-0.46367	-0.00028116	-0.72128	-0.00043736	-1.1849	-0.00071852	606.3696540978959	94.435	3.8289	94.503	93.215	97.044	0.068336					198	90	3	0	0	0	0.86587	1	9876	9876		29.17	4.6509	1	750990			18398	9946	12372	12381	21325	21325					0.12890394539772387
IPLVLEAS	8	Unmodified	_IPLVLEAS_					0	0	0			REV__ENSG00000113805|ENST00000263665|CNTN3	REV__ENSG00000113805|ENST00000263665|CNTN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.25518798828125	2	421.255111	840.49567	-1.2322	-0.00051907	-1.5244	-0.00064217	-2.7566	-0.0011612	421.25432904467385	84.477	1.3086	84.477	83.963	85.271	0					69	29	3	0	0	0	0.81548	1	8015	8015		20.482	0	1	450410	+		18399	18015	12373	12382	21326	21326					0.06904168154278523
IPLVMVRQV	9	Unmodified	_IPLVMVRQV_					0	0	0			REV__ENST00000338402.6_1_16:20250446-20250542:-|nuORF	REV__ENST00000338402.6_1_16:20250446-20250542:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3275146484375	2	527.825712	1053.63687	-0.052772	-2.7854E-05	2.3477	0.0012392	2.2949	0.0012113	528.327800772447	46.407	1.5552	46.328	45.955	47.51	-0.079006					63	45	2	0	0	0	0.69914	1	3441	3441		40.573	4.9543	1	542500	+		18400	25220	12374	12383	21327	21327					0.11219843255912565
IPNEIIHAL	9	Unmodified	_IPNEIIHAL_					0	0	0		ENSG00000099783|ENST00000325495|HNRNPM	ENSG00000099783|ENST00000325495|HNRNPM	ENSG00000099783|ENST00000325495|HNRNPM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2980041503906	2	510.297842	1018.58113	-0.63297	-0.00032301	0.87193	0.00044494	0.23895	0.00012194	510.29808473455745	61.945	1.119	62.334	61.633	62.752	0.38846					63	25	4	0	0	0	0.0015479	6	6621	6588;6600;6610;6621;6633;6647		143.89	50.691	1	899970			18401	1764	12375	12384	21328;21329;21330;21331;21332;21333	21331					0.07258333339939327
IPNEIIHAL	9	Unmodified	_IPNEIIHAL_					0	0	0		ENSG00000099783|ENST00000325495|HNRNPM	ENSG00000099783|ENST00000325495|HNRNPM	ENSG00000099783|ENST00000325495|HNRNPM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.29840087890625	2	510.297842	1018.58113	0.458	0.00023372	-0.42244	-0.00021557	0.035565	1.8149E-05	510.29753942254996	61.838	0.97779	62.392	61.971	62.949	0.55386					43	22	2	0	0	0	0.051853	5	6615	6594;6605;6615;6627;6640		107.01	29.69	1	878540			18402	1764	12375	12384	21334;21335;21336;21337;21338	21336					0.07258333339939327
IPNILPDFY	9	Unmodified	_IPNILPDFY_					0	0	0			REV__ENSG00000174231|ENST00000304992|PRPF8	REV__ENSG00000174231|ENST00000304992|PRPF8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.259521484375	2	546.292225	1090.5699	-1.508	-0.0008238	-2.5079	-0.0013701	-4.0159	-0.0021939	546.290603076497	59.804	0.75535	60.195	59.891	60.646	0.39077					28	19	2	0	0	0	0.19072	1	6281	6281		90.777	16.802	1	431320	+		18403	21981	12376	12385	21339	21339					0.028235112458105505
IPNILPDFY	9	Unmodified	_IPNILPDFY_					0	0	0			REV__ENSG00000174231|ENST00000304992|PRPF8	REV__ENSG00000174231|ENST00000304992|PRPF8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2587890625	2	546.292225	1090.5699	-0.74998	-0.00040971	-2.7648	-0.0015104	-3.5148	-0.0019201	546.2905498225584	59.696	0.58371	60.249	59.919	60.502	0.55323					22	14	2	0	0	0	0.20433	1	6346	6346		79.451	5.4763	1	437230	+		18404	21981	12376	12385	21340	21340					0.028235112458105505
IPNPNGTE	8	Unmodified	_IPNPNGTE_					0	0	0		ENSG00000117000|ENST00000372771|RLF	ENSG00000117000|ENST00000372771|RLF	ENSG00000117000|ENST00000372771|RLF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.7579040527344	2	421.20615	840.397747	0.37768	0.00015908	1.6419	0.00069157	2.0195	0.00085065	421.2066710063946	17.505	0.28164	16.895	16.752	17.034	-0.6107					14	6	3	0	0	0	0.4196	1	259	259		12.207	0	1	198220			18405	2960	12377	12386	21341	21341					-0.02883640441712032
IPNPYALL	8	Unmodified	_IPNPYALL_					0	0	0			REV__nc|ENSG00000186591|P62256-2|UBE2H	REV__nc|ENSG00000186591|P62256-2|UBE2H	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2632751464844	2	450.763104	899.511654	-0.97492	-0.00043946	-3.5372	-0.0015944	-4.5121	-0.0020339	450.7614301229316	37.174	0.97488	37.121	36.828	37.802	-0.053558					34	21	3	0	0	0	0.4196	1	2588	2588		29.842	0	1	104340	+		18406	22867	12378	12387	21342	21342					0.057878743911942365
IPPHILLATG	10	Unmodified	_IPPHILLATG_					0	0	0		ENSG00000111701|ENST00000229304|APOBEC1	ENSG00000111701|ENST00000229304|APOBEC1	ENSG00000111701|ENST00000229304|APOBEC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3134155273438	2	516.316035	1030.61752	0.81867	0.00042269	-4.2005	-0.0021688	-3.3818	-0.0017461	516.3139586362336	103.31	1.1027	103.44	102.97	104.08	0.12621					71	27	3	0	0	0	0.86201	1	10903	10903		24.203	1.1603	1	1034200			18407	2606	12379	12388	21343	21343					0.10343210236646883
IPPKLRVL	8	Unmodified	_IPPKLRVL_					0	0	0		nc|ENSG00000121446|A5PLK6-5|RGSL1	nc|ENSG00000121446|A5PLK6-5|RGSL1	nc|ENSG00000121446|A5PLK6-5|RGSL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.7374572753906	2	468.323663	934.632772	-0.11555	-5.4117E-05	0.39095	0.00018309	0.27539	0.00012897	468.323799806484	74.499	0.47713	74.542	74.297	74.774	0.0429					22	17	2	0	0	0	0.4196	1	7151	7151		13.775	9.0936	1	45791			18408	14878	12380	12389	21344	21344					0.1628412182452621
IPPLFGSLPPR	11	Unmodified	_IPPLFGSLPPR_					0	0	0			REV__ENSG00000158435|ENST00000289382|CNOT11	REV__ENSG00000158435|ENST00000289382|CNOT11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.85595703125	2	597.355691	1192.69683	0.9357	0.00055895	-0.77395	-0.00046233	0.16175	9.662E-05	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.64498	1	9487	9487		39.253	1.4413	1	19058000	+		18409	20606	12381	12390	21345	21345					0.10818857190793096
IPPRTIKPKM	10	Unmodified	_IPPRTIKPKM_					0	0	0			REV__nc|ENSG00000030304|O15146-3|MUSK	REV__nc|ENSG00000030304|O15146-3|MUSK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.3594360351562	2	590.865369	1179.71618	1.3812	0.0008161	1.0222	0.000604	2.4034	0.0014201	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.8545	1	12724	12724		36.447	8.5645	1	6168400	+		18410	16273	12382	12391	21346	21346					0.1335149021003872
IPPSILPH	8	Unmodified	_IPPSILPH_					0	0	0		chr19:49447099-49447261|32|12.84|0.2|6.0|-|0|PIH1D1,None|1	chr19:49447099-49447261|32|12.84|0.2|6.0|-|0|PIH1D1,None|1	chr19:49447099-49447261|32|12.84|0.2|6.0|-|0|PIH1D1,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26483154296875	2	437.263271	872.511988	1.5079	0.00065936	4.3859	0.0019178	5.8938	0.0025772	437.26518584977657	27.503	2.0915	27.248	26.544	28.636	-0.25465					92	49	2	0	0	0	0.86791	1	1691	1691		28.254	6.5519	1	428760			18411	289	12383	12392	21347	21347					0.07063294111037521
IPPTKTRPL	9	Unmodified	_IPPTKTRPL_					0	0	0		ENST00000452106.5_1_22:41623607-41626252:+|nuORF;ENST00000466589.5_1_22:41623698-41626252:+|nuORF;ENSG00000100395|ENST00000216237|L3MBTL2	ENST00000452106.5_1_22:41623607-41626252:+|nuORF	ENST00000452106.5_1_22:41623607-41626252:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.82061767578125	2	511.821484	1021.62842	-0.12593	-6.4454E-05	-1.4771	-0.00075603	-1.6031	-0.00082048	511.8205326826124	82.197	0.9657	82.623	82.159	83.124	0.42646					55	23	3	0	0	0	0.78058	1	9526	9526		30.504	1.3541	1	1502000			18412	1837	12384	12393	21348	21348					0.11846612610929697
IPQAALAKPI	10	Unmodified	_IPQAALAKPI_					0	0	0		nc|ENSG00000166889|Q86TB9-2|PATL1;ENSG00000166889|ENST00000300146|PATL1;nc|ENSG00000166889|Q86TB9-4|PATL1;nc|ENSG00000166889|Q86TB9-3|PATL1	nc|ENSG00000166889|Q86TB9-2|PATL1	nc|ENSG00000166889|Q86TB9-2|PATL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.3274841308594	2	511.32386	1020.63317	2.4721	0.001264	3.8453	0.0019662	6.3174	0.0032303	511.3257127043103	97.291	2.1515	97.235	96.802	98.953	-0.055542					136	49	4	0	0	0	0.8608	3	10542	10529;10542;10554		34.173	6.2903	1	1837000			18413	6242	12385	12394	21349;21350;21351	21350					0.12367496753699925
IPQFPPIPEE	10	Unmodified	_IPQFPPIPEE_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.8077392578125	2	583.808239	1165.60193	-1.8251	-0.0010655	2.2047	0.0012871	0.37962	0.00022163	583.8093288431887	58.972	0.86796	59.364	58.941	59.809	0.39209					46	20	3	0	0	0	0.54701	1	6200	6200		52.937	3.4007	1	601860			18414	4251	12386	12395	21352	21352					0.025748789289536944
IPQSMSHH	8	Unmodified	_IPQSMSHH_					0	0	0			REV__nc|ENSG00000055917|Q8TB72-2|PUM2	REV__nc|ENSG00000055917|Q8TB72-2|PUM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72320556640625	2	468.721444	935.428335	1.5416	0.00072257	2.4315	0.0011397	3.973	0.0018622	468.7225776858063	103.87	1.2091	104.06	103.68	104.89	0.18887					87	29	4	0	0	0	0.90465	1	12603	12603		40.573	5.3719	1	1879100	+		18415	16414	12387	12396	21353	21353					-0.04196185328316915
IPQSSSFSGG	10	Unmodified	_IPQSSSFSGG_					0	0	0			REV__ENSG00000274070|ENST00000616305|CASTOR2	REV__ENSG00000274070|ENST00000616305|CASTOR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.728515625	2	483.729989	965.445425	-0.43765	-0.00021171	-2.1424	-0.0010364	-2.5801	-0.0012481	483.7287765633433	73.809	0.56664	74.196	73.93	74.496	0.3878					32	14	3	0	0	0	0.77314	1	8305	8305		40.778	10.275	1	556160	+		18416	23996	12388	12397	21354	21354					-0.0386798624150515
IPQSSSFSGG	10	Unmodified	_IPQSSSFSGG_					0	0	0			REV__ENSG00000274070|ENST00000616305|CASTOR2	REV__ENSG00000274070|ENST00000616305|CASTOR2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	483.729989	965.445425	-0.43765	-0.00021171	-2.1424	-0.0010364	-2.5801	-0.0012481	483.7287765633433	73.809	0.56664	74.196	73.93	74.496	0.3878	-0.017627	0.00014663	NaN	40.778	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	556160	+		18417	23996	12388	12397							-0.0386798624150515
IPQSSSFSGG	10	Unmodified	_IPQSSSFSGG_					0	0	0			REV__ENSG00000274070|ENST00000616305|CASTOR2	REV__ENSG00000274070|ENST00000616305|CASTOR2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	483.729989	965.445425	-0.35196	-0.00017025	-2.4105	-0.001166	-2.7624	-0.0013363	483.7287575747358	73.673	0.53426	74.232	73.965	74.499	0.5589	0.017627	-0.00011271	NaN	40.778	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	497880	+		18418	23996	12388	12397							-0.0386798624150515
IPRFLITYE	9	Unmodified	_IPRFLITYE_					0	0	0		ENST00000335154.9_1_12:50032767-50032947:-|nuORF	ENST00000335154.9_1_12:50032767-50032947:-|nuORF	ENST00000335154.9_1_12:50032767-50032947:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3270874023438	2	576.326599	1150.63865	-0.43356	-0.00024987	0.41939	0.00024171	-0.014164	-8.1631E-06	576.3267440955658	72.572	0.78255	73.126	72.818	73.6	0.55386					50	18	4	0	0	0	0.30689	1	8135	8135		64.207	2.0999	1	1181100			18419	10153	12389	12398	21355	21355					0.06935175545504535
IPRGAQTIPRV	11	Unmodified	_IPRGAQTIPRV_					0	0	0			REV__nc|ENSG00000165533|Q8TAM2-6|TTC8	REV__nc|ENSG00000165533|Q8TAM2-6|TTC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.865478515625	2	604.367121	1206.71969	-0.12671	-7.6581E-05	-0.17423	-0.0001053	-0.30095	-0.00018188	604.3667576937121	114.61	2.863	114.64	114.11	116.97	0.026466					110	87	2	0	0	0	0.8127	1	12517	12517		8.6937	0	1	97003	+		18420	21194	12390	12399	21356	21356					0.12459876308253115
IPRIEDGNNF	10	Unmodified	_IPRIEDGNNF_					0	0	0		ENST00000560420.1_1_14:24606925-24607473:+|nuORF;ENST00000593111.1_1_17:40986588-40991030:+|nuORF;ENST00000561142.5_1_14:24605441-24607359:+|nuORF;nc|ENSG00000092010|Q06323-3|PSME1;ENSG00000092010|ENST00000206451|PSME1;nc|ENSG00000092010|Q06323-2|PSME1;ENSG00000131467|ENST00000590720|PSME3;nc|ENSG00000131467|P61289-3|PSME3;nc|ENSG00000131467|P61289-2|PSME3	ENST00000560420.1_1_14:24606925-24607473:+|nuORF	ENST00000560420.1_1_14:24606925-24607473:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.7957763671875	2	587.796195	1173.57784	0.71244	0.00041877	-1.3051	-0.00076714	-0.59267	-0.00034837	587.7953749754141	51.31	0.579	52.062	51.818	52.397	0.75174					27	13	3	0	0	0	0.21012	1	5122	5122		83.647	19.44	1	1145500			18421	1688	12391	12400	21357	21357					-0.0020096150471999863
IPRIKHYKV	9	Unmodified	_IPRIKHYKV_					0	0	0		ENSG00000035720|ENST00000265404|STAP1	ENSG00000035720|ENST00000265404|STAP1	ENSG00000035720|ENST00000265404|STAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3663330078125	2	577.36385	1152.71315	0.64819	0.00037424	3.8293	0.0022109	4.4775	0.0025852	577.3659582171192	102.04	3.0704	102.23	101.84	104.91	0.19484					206	76	5	0	0	0	0.7932	1	10777	10777		24.203	6.8378	1	17266000			18422	899	12392	12401	21358	21358					0.14289983147546081
IPRKFMFEHRK	11	Unmodified	_IPRKFMFEHRK_					0	0	0		nc|ENSG00000147231|Q6NSI4-4|RADX;ENSG00000147231|ENST00000372548|RADX;nc|ENSG00000147231|Q6NSI4-3|RADX	nc|ENSG00000147231|Q6NSI4-4|RADX	nc|ENSG00000147231|Q6NSI4-4|RADX	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.8055725097656	3	496.946729	1487.81836	-1.4823	-0.00073665	2.3284	0.0011571	0.84607	0.00042045	496.9477507131578	30.062	0.57259	30.09	29.833	30.406	0.028618					25	12	3	0	0	0	0.18131	1	1919	1919		5.4129	0	1	63596			18423	4889	12393	12402	21359	21359					0.09396156281650292
IPRPHLCQ	8	Carbamidomethyl (C)	_IPRPHLC(Carbamidomethyl (C))Q_	IPRPHLC(1)Q		IPRPHLC(50)Q		0	1	0		ENST00000576772.1_1_17:5087550-5094756:-|nuORF	ENST00000576772.1_1_17:5087550-5094756:-|nuORF	ENST00000576772.1_1_17:5087550-5094756:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.7715148925781	2	510.774011	1019.53347	-0.64993	-0.00033197	-3.975	-0.0020303	-4.625	-0.0023623	510.77187525321716	71.61	0.5751	71.651	71.424	71.999	0.040222					48	23	3	0	0	0	0.92973	1	6865	6865		50.025	7.5501	1	203960			18424	14059	12394	12403	21360	21360	187				0.024483558681140494
IPRQRGKRRRR	11	Unmodified	_IPRQRGKRRRR_					0	0	0			REV__ENST00000308664.10_1_12:110719006-110719138:+|nuORF	REV__ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.64959716796875	3	493.650297	1477.92906	-2.0219	-0.0009981	0.44974	0.00022201	-1.5721	-0.00077609	493.6504107120104	44.606	1.8952	44.602	43.855	45.75	-0.0041618					105	44	3	0	0	0	0.88596	1	3557	3557		3.6191	0.21035	1	507660	+		18425	24864	12395	12404	21361	21361					0.20921557104770727
IPRRKPQKN	9	Unmodified	_IPRRKPQKN_					0	0	0			REV__ENSG00000066279|ENST00000367409|ASPM	REV__ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8540649414062	2	568.854181	1135.69381	-0.35573	-0.00020236	-0.64806	-0.00036865	-1.0038	-0.00057101	568.8537210066357	105.99	1.5144	105.99	105.37	106.89	0					65	34	2	0	0	0	0.78536	1	11075	11075		29.15	2.4566	1	402380	+		18426	16520	12396	12405	21362	21362					0.1313902685665198
IPRTLDTKDR	10	Unmodified	_IPRTLDTKDR_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|103|3|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|103|3|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|103|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5655822753906	3	405.566571	1213.67788	-1.5858	-0.00064316	-3.0129	-0.0012219	-4.5987	-0.0018651	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.86446	1	5202	5202		30.569	0	1	181560			18427	14501	12397	12406	21363	21363					0.0795927582908007
IPRVRRAVL	9	Unmodified	_IPRVRRAVL_					0	0	0		ENST00000540645.5_1_9:116823569-116838999:-|nuORF;ENSG00000106927|ENST00000265132|AMBP	ENST00000540645.5_1_9:116823569-116838999:-|nuORF	ENST00000540645.5_1_9:116823569-116838999:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	540.3592529296875	2	540.361642	1078.70873	-1.4718	-0.00079528	-3.9469	-0.0021328	-5.4187	-0.002928	540.3593515673492	36.742	1.4181	36.742	36.293	37.711	0					69	32	3	0	0	0	0.7932	1	2176	2176		17.365	1.7232	1	257620			18428	2322	12398	12407	21364	21364					0.17252518724649235
IPSFLLRH	8	Unmodified	_IPSFLLRH_					0	0	0		ENST00000216489.7_1_14:78139965-78140151:-|nuORF	ENST00000216489.7_1_14:78139965-78140151:-|nuORF	ENST00000216489.7_1_14:78139965-78140151:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7962341308594	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.8347	1	4802	4802		23.042	2.0956	1	703950			18429	9143	12399	12408	21365	21365					0.08446074267988024
IPSFLLRH	8	Unmodified	_IPSFLLRH_					0	0	0		ENST00000216489.7_1_14:78139965-78140151:-|nuORF	ENST00000216489.7_1_14:78139965-78140151:-|nuORF	ENST00000216489.7_1_14:78139965-78140151:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79608154296875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.165	1	67.217	66.717	67.717	0.052368								0	0	0	0.29353	1	5973	5973		28.254	1.4582	1				18430	9143	12399	12408	21366	21366					0.08446074267988024
IPSIGQEGSY	10	Unmodified	_IPSIGQEGSY_					0	0	0			REV__nc|ENSG00000105967|O14948-4|TFEC	REV__nc|ENSG00000105967|O14948-4|TFEC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7771606445312	2	525.758746	1049.50294	-0.31321	-0.00016467	-0.66386	-0.00034903	-0.97707	-0.00051371	525.7587014293381	60.797	0.50378	61.186	60.818	61.322	0.38945					17	13	2	0	0	0	0.37624	1	6414	6414		45.972	3.5761	1	304090	+		18431	17586	12400	12409	21367	21367					-0.01983144035943951
IPSLKTPVC	9	Unmodified	_IPSLKTPVC_					0	0	0			REV__ENSG00000263761|ENST00000581492|GDF2	REV__ENSG00000263761|ENST00000581492|GDF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2774353027344	2	479.275521	956.536489	0.53004	0.00025403	3.2196	0.0015431	3.7496	0.0017971	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.78536	1	8256	8256		29.15	2.3535	1	2070000	+		18432	23954	12401	12410	21368	21368					0.05648186202256511
IPSPLLLSVLP	11	Unmodified	_IPSPLLLSVLP_					0	0	0			REV__ENST00000603606.1_1_14:64061078-64061531:-|nuORF	REV__ENST00000603606.1_1_14:64061078-64061531:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.8710327148438	2	574.8681	1147.72165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.28	1	109.28	108.78	109.78	0								0	0	0	0.56276	1	11358	11358		14.865	0	1		+		18433	29346	12402	12411	21369	21369					0.15369492273521246
IPSPVGNKLAK	11	Unmodified	_IPSPVGNKLAK_					0	0	0			REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.3439331054688	2	562.345323	1122.67609	-1.2373	-0.00069581	-1.7413	-0.00097921	-2.9786	-0.001675	562.344206256515	90.825	4.32	90.894	89.732	94.052	0.069328					169	102	3	0	0	0	0.74763	1	9271	9271		22.58	1.6327	1	540920	+		18434	23619	12403	12412	21370	21370					0.11966266811123205
IPSRCVYLE	9	Carbamidomethyl (C)	_IPSRC(Carbamidomethyl (C))VYLE_	IPSRC(1)VYLE		IPSRC(55)VYLE		0	1	0		ENSG00000110344|ENST00000252108|UBE4A;nc|ENSG00000110344|Q14139-2|UBE4A	ENSG00000110344|ENST00000252108|UBE4A	ENSG00000110344|ENST00000252108|UBE4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.7904663085938	2	568.792066	1135.56958	0.46047	0.00026191	-3.3629	-0.0019128	-2.9024	-0.0016508	568.7901441593218	54.901	0.79583	55.308	54.781	55.577	0.40663					41	18	3	0	0	0	0.44421	1	5612	5612		54.776	8.8041	1	437090			18435	2523	12404	12413	21371	21371	30				0.007217682543114279
IPSSSLGTAWT	11	Unmodified	_IPSSSLGTAWT_					0	0	0		ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.287841796875	2	560.287671	1118.56079	-1.1272	-0.00063153	1.2733	0.00071341	0.14613	8.1875E-05	560.2882669932782	78.496	1.0533	78.552	78.241	79.294	0.056114					77	30	4	0	0	0	0.64498	1	7642	7642		39.253	2.8061	1	910100			18436	3006	12405	12414	21372	21372					0.006251178894899567
IPSSSLGTAWT	11	Unmodified	_IPSSSLGTAWT_					0	0	0		ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.287841796875	2	560.287671	1118.56079	0.66776	0.00037414	-0.49396	-0.00027676	0.17379	9.7375E-05	560.287268376834	78.313	1.0768	78.365	78.021	79.097	0.051674					72	31	4	0	0	0	0.32318	1	7704	7704		69.628	6.2012	1	833690			18437	3006	12405	12414	21373	21373					0.006251178894899567
IPSVPVPIEF	10	Unmodified	_IPSVPVPIEF_					0	0	0			REV__ENSG00000170832|ENST00000300896|USP32	REV__ENSG00000170832|ENST00000300896|USP32	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3176879882812	2	549.3157	1096.61685	0.23279	0.00012788	3.2403	0.00178	3.4731	0.0019078	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.86718	1	10599	10599		27.882	3.3631	1	3004300	+		18438	21690	12406	12415	21374	21374					0.07240370796944262
IPTFRVKF	8	Unmodified	_IPTFRVKF_					0	0	0		ENSG00000102452|ENST00000251127|NALCN	ENSG00000102452|ENST00000251127|NALCN	ENSG00000102452|ENST00000251127|NALCN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34796142578125	2	504.30547	1006.59639	0.29934	0.00015096	3.0701	0.0015482	3.3694	0.0016992	504.8076718599967	35.91	1.2759	36.157	35.783	37.059	0.2477					61	31	4	0	0	0	0.4196	1	2837	2837		35.201	8.4046	1	177570			18439	2005	12407	12416	21375	21375					0.09335244927797248
IPTHKLSSLKK	11	Unmodified	_IPTHKLSSLKK_					0	0	0		ENSG00000147082|ENST00000376042|CCNB3	ENSG00000147082|ENST00000376042|CCNB3	ENSG00000147082|ENST00000376042|CCNB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.393310546875	2	626.392805	1250.77106	6.325	0.0039619	-0.13149	-8.2365E-05	6.1935	0.0038796	626.3925398868604	109.87	0.514	109.94	109.72	110.23	0.068001					34	23	3	0	0	0	0.74763	1	13326	13326		22.58	1.6327	1	960900			18440	4879	12408	12417	21376	21376					0.15570200282309088
IPTKKPHKAID	11	Unmodified	_IPTKKPHKAID_					0	0	0			REV__ENST00000534296.5_1_11:35226115-35226250:+|nuORF	REV__ENST00000534296.5_1_11:35226115-35226250:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	624.3749389648438	2	624.377155	1246.73976	3.9982	0.0024964	2.4796	0.0015482	6.4778	0.0040446	624.3785127327301	103.46	0.64096	103.72	103.33	103.97	0.26524					30	14	3	0	0	0	0.72106	1	12627	12627		28.081	4.5588	1	1453100	+		18441	28249	12409	12418	21377	21377					0.12625627248212368
IPTKQTQTF	9	Unmodified	_IPTKQTQTF_					0	0	0		ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENSG00000173110|ENST00000309758|HSPA6;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENSG00000109971|ENST00000534624|HSPA8;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2	ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.2921752929688	2	532.292756	1062.57096	0.89883	0.00047844	-0.72558	-0.00038622	0.17325	9.2218E-05	532.2921935507152	35.38	1.4625	35.627	34.892	36.354	0.24769					78	37	4	0	0	0	2.7627E-13	5	2680	2669;2680;2690;2703;2717		166.68	65.078	1	2531100			18442	2497;11824;11157	12410	12419	21378;21379;21380;21381;21382	21379					0.042177256146942455
IPTKQTQTF	9	Unmodified	_IPTKQTQTF_					0	0	0		ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000552265.2_1_12:111822376-111823062:+|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENSG00000173110|ENST00000309758|HSPA6;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENSG00000109971|ENST00000534624|HSPA8;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2	ENST00000397642.3_1_1:247394123-247394771:+|nuORF;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.2921752929688	2	532.292756	1062.57096	1.2715	0.00067683	-1.0494	-0.00055857	0.22218	0.00011826	532.2920441113497	35.34	1.1022	35.721	35.211	36.313	0.3812					69	28	3	0	0	0	4.5757E-05	6	2722	2686;2697;2709;2722;2734;2747		150.36	59.992	1	2545600			18443	2497;11824;11157	12410	12419	21383;21384;21385;21386;21387;21388	21386					0.042177256146942455
IPTLIKRGEKP	11	Unmodified	_IPTLIKRGEKP_					0	0	0			REV__ENST00000483545.1_1_3:139065838-139069914:+|nuORF	REV__ENST00000483545.1_1_3:139065838-139069914:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3931274414062	2	626.392805	1250.77106	2.3084	0.0014459	4.3102	0.0026999	6.6186	0.0041458	626.3953217408156	109.92	1.4097	109.98	109.55	110.95	0.06794					99	57	2	0	0	0	0.65746	2	13295	13295;13360		37.812	6.2817	1	615360	+		18444	22040	12411	12420	21389;21390	21389					0.15570200282309088
IPTLWRVQ	8	Unmodified	_IPTLWRVQ_					0	0	0			REV__ENST00000500949.6_1_15:41594363-41594528:+|nuORF	REV__ENST00000500949.6_1_15:41594363-41594528:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.79986572265625	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.81548	1	3343	3343		20.482	2.1574	1	412810	+		18445	27809	12412	12421	21391	21391					0.08122056922411502
IPTQPGPP	8	Unmodified	_IPTQPGPP_					0	0	0		ENST00000583497.1_1_18:1159162-1174680:+|nuORF	ENST00000583497.1_1_18:1159162-1174680:+|nuORF	ENST00000583497.1_1_18:1159162-1174680:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.7239990234375	2	403.723978	805.433404	-1.1089	-0.00044771	1.5518	0.00062651	0.44287	0.0001788	403.7244510631445	64.933	1.6766	64.971	63.905	65.582	0.037849					135	64	4	0	0	0	0.9295	2	5764	5710;5764		55.504	5.4358	1	1390300			18446	14123	12413	12422	21392;21393	21393					0.022904418059511045
IPTRLKPDVKS	11	Unmodified	_IPTRLKPDVKS_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3839111328125	2	627.382437	1252.75032	-0.21917	-0.0001375	0.84427	0.00052968	0.6251	0.00039218	627.3827536710313	113.14	0.55793	113.07	112.73	113.28	-0.067215					52	23	3	0	0	0	0.75921	1	12269	12269		19.997	0.89325	1	140420	+		18447	20239	12414	12423	21394	21394					0.1340560990265658
IPTRLKPDVKS	11	Unmodified	_IPTRLKPDVKS_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3834838867188	2	627.382437	1252.75032	-0.21902	-0.00013741	0.20475	0.00012846	-0.01427	-8.9526E-06	627.3824199275489	117.28	0.27765	117.21	117	117.28	-0.075302					26	9	4	0	0	0	0.67778	1	12575	12575		35.152	4.8343	1	4893700	+		18448	20239	12414	12423	21395	21395					0.1340560990265658
IPTRLKPDVKS	11	Unmodified	_IPTRLKPDVKS_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3829956054688	2	627.382437	1252.75032	-0.21901	-0.00013741	0.4198	0.00026338	0.20079	0.00012597	627.38251010406	118.49	0.49898	118.41	118.19	118.69	-0.07531					43	18	3	0	0	0	0.65746	1	12717	12717		37.812	4.9991	1	1699700	+		18449	20239	12414	12423	21396	21396					0.1340560990265658
IPTRLKPDVKS	11	Unmodified	_IPTRLKPDVKS_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3843994140625	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.6921	2	12533	12533;12749		32.812	4.9302	1	19815000	+		18450	20239	12414	12423	21397;21398	21397					0.1340560990265658
IPTRLKPDVKS	11	Unmodified	_IPTRLKPDVKS_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.383544921875	2	627.382437	1252.75032	1.3884	0.00087108	-1.8152	-0.0011388	-0.42679	-0.00026776	627.3810650235214	111.67	0.61607	111.78	111.48	112.09	0.11118					52	18	4	0	0	0	0.7342	1	12015	12015		25.574	0	1	62529000	+		18451	20239	12414	12423	21399	21399					0.1340560990265658
IPTRLKPDVKS	11	Unmodified	_IPTRLKPDVKS_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3836059570312	2	627.382437	1252.75032	0.9271	0.00058165	-0.88209	-0.00055341	0.045014	2.8241E-05	627.3816034705419	112.22	0.3718	112.29	112.11	112.48	0.066025					31	13	4	0	0	0	0.7434	1	12094	12094		23.523	0.94304	1	1862300	+		18452	20239	12414	12423	21400	21400					0.1340560990265658
IPTRLKPDVKS	11	Unmodified	_IPTRLKPDVKS_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3859252929688	2	627.382437	1252.75032	0.92709	0.00058164	-0.48746	-0.00030582	0.43963	0.00027582	627.3819778015263	118.8	0.24324	118.86	118.79	119.03	0.060577					22	9	4	0	0	0	0.6921	1	12486	12486		32.812	7.2384	1	434870	+		18453	20239	12414	12423	21401	21401					0.1340560990265658
IPTRLKPDVKS	11	Unmodified	_IPTRLKPDVKS_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	627.382437	1252.75032	-0.22048	-0.00013833	0.50324	0.00031572	0.28276	0.0001774	627.3822789706328	118.88	0.10582	118.8	118.71	118.82	-0.07531	-0.026326	0.0010538	NaN	32.812	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62304	+		18454	20239	12414	12423							0.1340560990265658
IPTRLKPDVKS	11	Unmodified	_IPTRLKPDVKS_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	627.382437	1252.75032	0.92709	0.00058164	-0.48746	-0.00030582	0.43963	0.00027582	627.3819778015263	118.8	0.24324	118.86	118.79	119.03	0.060577	0.026326	-0.0001893	NaN	32.812	22	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	434870	+		18455	20239	12414	12423							0.1340560990265658
IPTSHSARY	9	Unmodified	_IPTSHSARY_					0	0	0			REV__nc|ENSG00000258992|Q01534-2|TSPY1	REV__nc|ENSG00000258992|Q01534-2|TSPY1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.2666015625	2	516.267073	1030.51959	0.42225	0.00021799	-4.1704	-0.0021531	-3.7482	-0.0019351	516.2648776959975	29.636	0.68202	29.621	29.304	29.987	-0.015167					28	20	2	0	0	0	0.69624	1	1504	1504		40.778	6.6056	1	30058	+		18456	21516	12415	12424	21402	21402					0.005554016406676965
IPVAQKRKTPN	11	Unmodified	_IPVAQKRKTPN_					0	0	0		ENSG00000163563|ENST00000368141|MNDA	ENSG00000163563|ENST00000368141|MNDA	ENSG00000163563|ENST00000368141|MNDA	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3787231445312	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.01	1	117.93	117.43	118.43	-0.088509								0	0	0	0.56276	1	12714	12714		22.58	2.5829	1				18457	5825	12416	12425	21403	21403					0.13056145479754377
IPVAWLIFLCV	11	Unmodified	_IPVAWLIFLCV_					0	0	0		ENSG00000179817|ENST00000314254|MRGPRX4	ENSG00000179817|ENST00000314254|MRGPRX4	ENSG00000179817|ENST00000314254|MRGPRX4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	637.3670654296875	2	637.372495	1272.73044	0.0096069	6.1232E-06	-3.1476	-0.0020062	-3.138	-0.0020001	637.3704089191367	105.98	2.6955	105.98	104.5	107.2	0					156	62	4	0	0	0	0.74035	1	11069	11069		24.203	1.1603	1	1384300			18458	7293	12417	12426	21404	21404					0.10498142638334684
IPVDRRPG	8	Unmodified	_IPVDRRPG_					0	0	0		ENST00000466082.1_3_9:34660594-34661492:+|nuORF;ENSG00000137070|ENST00000441545|IL11RA	ENST00000466082.1_3_9:34660594-34661492:+|nuORF;ENSG00000137070|ENST00000441545|IL11RA	ENST00000466082.1_3_9:34660594-34661492:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.26605224609375	2	455.266876	908.519199	-0.70894	-0.00032276	-0.74748	-0.0003403	-1.4564	-0.00066306	455.26644591079787	38.513	1.1212	39.035	38.593	39.714	0.52235					55	26	3	0	0	0	0.93786	1	3183	3183		53.351	2.016	1	859060			18459	12123;4168	12418	12427	21405	21405					0.06128026711473922
IPVEQKEGAF	10	Unmodified	_IPVEQKEGAF_					0	0	0		nc|ENSG00000165732|Q9NR30-2|DDX21;ENSG00000165732|ENST00000354185|DDX21	nc|ENSG00000165732|Q9NR30-2|DDX21	nc|ENSG00000165732|Q9NR30-2|DDX21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2938842773438	2	559.298039	1116.58152	-1.8306	-0.0010239	1.0587	0.00059212	-0.77192	-0.00043173	559.2988812121007	43.071	0.43916	43.845	43.624	44.064	0.7738					24	10	3	0	0	0	0.28217	1	3893	3893		74.255	8.7897	1	844120			18460	6120	12419	12428	21406	21406					0.027897082691197284
IPVEQKEGAF	10	Unmodified	_IPVEQKEGAF_					0	0	0		nc|ENSG00000165732|Q9NR30-2|DDX21;ENSG00000165732|ENST00000354185|DDX21	nc|ENSG00000165732|Q9NR30-2|DDX21	nc|ENSG00000165732|Q9NR30-2|DDX21	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	559.298039	1116.58152	-0.49448	-0.00027656	-1.4209	-0.0007947	-1.9154	-0.0010713	559.2972099613501	43.292	0.52715	43.726	43.419	43.947	0.4334	-0.059753	-0.0013664	NaN	74.255	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	789050			18461	6120	12419	12428							0.027897082691197284
IPVFKAIQPEE	11	Unmodified	_IPVFKAIQPEE_					0	0	0		nc|ENSG00000136828|Q5JS13-3|RALGPS1;ENST00000472427.5_1_9:129677191-129778941:+|nuORF;nc|ENSG00000136828|Q5JS13-5|RALGPS1;ENST00000373439.6_1_9:129677191-129831664:+|nuORF;nc|ENSG00000136828|Q5JS13-4|RALGPS1;nc|ENSG00000136828|Q5JS13-2|RALGPS1;nc|ENSG00000136828|Q5JS13-7|RALGPS1;ENSG00000136828|ENST00000259351|RALGPS1	nc|ENSG00000136828|Q5JS13-3|RALGPS1	nc|ENSG00000136828|Q5JS13-3|RALGPS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.2378234863281	3	424.239573	1269.69689	0.31575	0.00013395	-3.0077	-0.001276	-2.6919	-0.001142	424.23799526801355	19.023	0.56054	18.394	18.15	18.711	-0.6296					33	12	4	0	0	0	0.59831	1	472	472		44.639	3.2128	1	111400			18462	14942	12420	12429	21407	21407					0.07282812400148941
IPVFQRGGTI	10	Unmodified	_IPVFQRGGTI_					0	0	0		ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB	ENSG00000089597|ENST00000356638|GANAB	ENSG00000089597|ENST00000356638|GANAB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.3129272460938	2	544.316566	1086.61858	0.78952	0.00042975	-4.4183	-0.0024049	-3.6287	-0.0019752	544.3140930012478	16.907	0.32985	16.984	16.831	17.161	0.07715					20	13	2	0	0	0	0.8651	1	148	148		25.574	2.5316	1	70088			18463	1627	12421	12430	21408	21408					0.07873424605577384
IPVHIDNF	8	Unmodified	_IPVHIDNF_					0	0	0			REV__ENSG00000083642|ENST00000315596|PDS5B	REV__ENSG00000083642|ENST00000315596|PDS5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	477.7581787109375	2	477.75581	953.497067	0.059877	2.8606E-05	-0.41569	-0.0001986	-0.35581	-0.00016999	477.75552182353096	20.767	0.38484	20.843	20.579	20.964	0.07585					22	18	2	0	0	0	0.85277	1	536	536		25.45	0.93098	1	62658	+		18464	16858	12422	12431	21409	21409					0.018458022430422716
IPVKKKPKIL	10	Unmodified	_IPVKKKPKIL_					0	0	0			REV__ENST00000244043.4_1_20:48123609-48123702:-|nuORF	REV__ENST00000244043.4_1_20:48123609-48123702:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533325195312	2	582.415552	1162.81655	0.15795	9.199E-05	-1.5337	-0.00089322	-1.3757	-0.00080123	582.9156563974782	103.34	0.27562	103.38	103.24	103.51	0.041481					9	6	2	0	0	0	0.37624	1	11220	11220		0.99688	0	1	196640	+		18465	24243	12423	12432	21410	21410					0.2416547053535396
IPVKLVHDSL	10	Unmodified	_IPVKLVHDSL_					0	0	0		ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3;ENST00000484023.1_1_3:194151670-194152613:-|nuORF	ENSG00000133657|ENST00000645319|ATP13A3	ENSG00000133657|ENST00000645319|ATP13A3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8490600585938	2	560.839874	1119.66519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.07	1	116.09	115.59	116.59	0.026466								0	0	0	0.45132	1	12746	12746		19.997	0.89325	1				18466	3887	12424	12433	21411	21411					0.11014864436833705
IPVKTRSAP	9	Unmodified	_IPVKTRSAP_					0	0	0		ENSG00000147130|ENST00000314425|ZMYM3;nc|ENSG00000147130|Q14202-2|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7986755371094	2	484.798009	967.581465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.116	1	16.092	15.592	16.592	-0.024035								0	0	0	0.30778	1	112	112		27.882	1.1893	1				18467	4884	12425	12434	21412	21412					0.09637753059791976
IPVNSAGPPG	10	Unmodified	_IPVNSAGPPG_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	454.744873046875	2	454.745442	907.476331	0.75875	0.00034504	-1.8682	-0.00084954	-1.1094	-0.0005045	454.7444452036616	103.95	1.168	104.06	103.62	104.79	0.11684					52	28	3	0	0	0	0.86272	1	11035	11035		24.519	0.31644	1	321450			18468	7373	12426	12435	21413	21413					0.01889211863374385
IPYHSEVPVSL	11	Unmodified	_IPYHSEVPVSL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	620.832275390625	2	620.832246	1239.64994	-0.51033	-0.00031683	-0.17612	-0.00010934	-0.68644	-0.00042617	620.8322011425744	61.29	0.6341	61.679	61.505	62.139	0.38945					46	16	4	0	0	0	0.65746	1	6557	6557		37.812	2.6333	1	633710			18469	2832	12427	12436	21414	21414					0.039699528490018565
IPYHSEVPVSL	11	Unmodified	_IPYHSEVPVSL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.8306274414062	2	620.832246	1239.64994	0.34747	0.00021572	-1.0415	-0.00064663	-0.69408	-0.00043091	620.831501884774	61.24	0.7449	61.794	61.511	62.256	0.55386					46	19	3	0	0	0	0.31674	2	6533	6533;6567		71.877	6.9645	1	675170			18470	2832	12427	12436	21415;21416	21415					0.039699528490018565
IPYINLVKHLT	11	Unmodified	_IPYINLVKHLT_					0	0	0		nc|ENSG00000148459|Q5T2R2-3|PDSS1;ENSG00000148459|ENST00000376215|PDSS1;nc|ENSG00000148459|Q5T2R2-2|PDSS1	nc|ENSG00000148459|Q5T2R2-3|PDSS1	nc|ENSG00000148459|Q5T2R2-3|PDSS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.5856628417969	3	437.599212	1309.77581	0.64324	0.00028148	-0.8905	-0.00038968	-0.24726	-0.0001082	437.5986418766193	31.487	0.42545	31.594	31.377	31.802	0.10707					11	9	2	0	0	0	0.17243	1	2135	2135		17.167	11.166	1	44902			18471	4963	12428	12437	21417	21417					0.13331084425090012
IPYRLTLI	8	Unmodified	_IPYRLTLI_					0	0	0			REV__ENST00000502306.1_1_5:15450853-15451165:+|nuORF	REV__ENST00000502306.1_1_5:15450853-15451165:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.8135070800781	2	494.813128	987.611703	-0.073811	-3.6523E-05	-0.83851	-0.00041491	-0.91232	-0.00045143	494.8125328579167	110.35	1.0814	110.3	110.18	111.26	-0.055077					57	37	2	0	0	0	0.86791	1	11983	11983		28.254	1.4582	1	189850	+		18472	27819	12429	12438	21418	21418					0.11740111724986946
IQAFLGSA	8	Unmodified	_IQAFLGSA_					0	0	0		ENSG00000047597|ENST00000378616|XK	ENSG00000047597|ENST00000378616|XK	ENSG00000047597|ENST00000378616|XK	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.929443359375	2	403.723978	805.433404	-0.48871	-0.0001973	1.9499	0.0007872	1.4611	0.0005899	403.7246775710234	47.392	1.2485	47.304	46.966	48.215	-0.087646					66	38	3	0	0	0	0.4196	1	3540	3540		37.159	0	1	598180			18473	963	12430	12439	21419	21419					0.022904418059511045
IQAGKEALSH	10	Unmodified	_IQAGKEALSH_					0	0	0		nc|ENSG00000129493|Q86XA9-2|HEATR5A;nc|ENSG00000129493|Q86XA9|HEATR5A;ENSG00000129493|ENST00000543095|HEATR5A	nc|ENSG00000129493|Q86XA9-2|HEATR5A	nc|ENSG00000129493|Q86XA9-2|HEATR5A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.8277587890625	2	527.288005	1052.56146	-0.91424	-0.00048207	-3.1591	-0.0016658	-4.0733	-0.0021478	527.2863485003386	70.747	0.4427	70.823	70.595	71.037	0.076225					40	21	2	0	0	0	0.37624	1	6392	6392		49.536	7.1399	1	141910			18474	3591	12431	12440	21420	21420					0.0372795732916984
IQAQLDSLT	9	Unmodified	_IQAQLDSLT_					0	0	0		ENSG00000145781|ENST00000274458|COMMD10	ENSG00000145781|ENST00000274458|COMMD10	ENSG00000145781|ENST00000274458|COMMD10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.25885009765625	2	494.769114	987.523675	-1.5868	-0.00078509	-3.1867	-0.0015767	-4.7734	-0.0023618	494.76737132516195	40.335	0.86531	40.924	40.217	41.083	0.58915					32	21	2	0	0	0	0.20789	1	3461	3461		19.997	3.5236	1	344980			18475	4792	12432	12441	21421	21421					0.029414463437205995
IQAQSKKTK	9	Unmodified	_IQAQSKKTK_					0	0	0		nc|ENSG00000119326|Q9UBT7-3|CTNNAL1;nc|ENSG00000119326|Q9UBT7-2|CTNNAL1;ENSG00000119326|ENST00000325551|CTNNAL1	nc|ENSG00000119326|Q9UBT7-3|CTNNAL1	nc|ENSG00000119326|Q9UBT7-3|CTNNAL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3134155273438	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.75725	1	12380	12380		36.447	10.383	1	4038100			18476	3061	12433	12442	21422	21422					0.09941120742928433
IQAYLKIEK	9	Unmodified	_IQAYLKIEK_					0	0	0			REV__ENSG00000119661|ENST00000553645|DNAL1	REV__ENSG00000119661|ENST00000553645|DNAL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3323364257812	2	553.334424	1104.6543	-0.75754	-0.00041917	-2.8743	-0.0015905	-3.6319	-0.0020096	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.7932	1	10309	10309		25.574	1.0549	1	4355400	+		18477	18365	12434	12443	21423	21423					0.10615462062560255
IQDDQKKITK	10	Unmodified	_IQDDQKKITK_					0	0	0			REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2341003417969	3	406.23471	1215.6823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.273	1	25.933	25.433	26.433	-0.34035								0	0	0	0.45132	1	1438	1438		38.714	2.1862	1		+		18478	28982	12435	12444	21424	21424					0.08308740251982272
IQDGSQNT	8	Unmodified	_IQDGSQNT_					0	0	0		ENSG00000088247|ENST00000600480|KHSRP;nc|ENSG00000088247|Q92945|KHSRP	ENSG00000088247|ENST00000600480|KHSRP	ENSG00000088247|ENST00000600480|KHSRP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.5976257324219	2	431.698689	861.382825	4.3262	0.0018676	-2.4353	-0.0010513	1.8908	0.00081627	431.69745945330516	105.79	2.0172	105.97	104.64	106.66	0.18647					84	62	2	0	0	0	0.4196	1	12948	12948		44.117	22.157	1	240410			18479	1586	12436	12445	21425	21425					-0.053411323097179775
IQEFIVNKV	9	Unmodified	_IQEFIVNKV_					0	0	0		ENST00000508165.1_1_4:135248307-135248892:+|nuORF	ENST00000508165.1_1_4:135248307-135248892:+|nuORF	ENST00000508165.1_1_4:135248307-135248892:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3169555664062	2	545.318774	1088.623	-0.33932	-0.00018504	-3.4934	-0.001905	-3.8327	-0.00209	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.73802	3	8887	8887;8933;9075		37.812	8.6415	1	4710900			18480	12972	12437	12446	21426;21427;21428	21426					0.08222889028479585
IQEFIVNKV	9	Unmodified	_IQEFIVNKV_					0	0	0		ENST00000508165.1_1_4:135248307-135248892:+|nuORF	ENST00000508165.1_1_4:135248307-135248892:+|nuORF	ENST00000508165.1_1_4:135248307-135248892:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3159790039062	2	545.318774	1088.623	-1.3538	-0.00073823	-2.3594	-0.0012866	-3.7132	-0.0020249	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.71772	1	10302	10302		39.253	5.0803	1	5184000			18481	12972	12437	12446	21429	21429					0.08222889028479585
IQEFLFIRR	9	Unmodified	_IQEFLFIRR_					0	0	0			REV__ENST00000515144.5_1_5:14293150-14488426:+|nuORF	REV__ENST00000515144.5_1_5:14293150-14488426:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3549194335938	2	611.358765	1220.70298	-0.25906	-0.00015838	-4.1924	-0.0025631	-4.4515	-0.0027215	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.71772	1	9328	9328		39.253	1.4413	1	3360200	+		18482	16304	12438	12447	21430	21430					0.10145375422303005
IQEFLFIRR	9	Unmodified	_IQEFLFIRR_					0	0	0			REV__ENST00000515144.5_1_5:14293150-14488426:+|nuORF	REV__ENST00000515144.5_1_5:14293150-14488426:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3538818359375	2	611.358765	1220.70298	0.21646	0.00013233	-4.1006	-0.0025069	-3.8841	-0.0023746	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.71772	1	10026	10026		39.253	0	1	12399000	+		18483	16304	12438	12447	21431	21431					0.10145375422303005
IQEFSKKPL	9	Unmodified	_IQEFSKKPL_					0	0	0			REV__ENST00000547581.5_1_12:48529049-48539488:+|nuORF	REV__ENST00000547581.5_1_12:48529049-48539488:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3167114257812	2	545.318774	1088.623	-0.33932	-0.00018504	-3.4934	-0.001905	-3.8327	-0.00209	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.64555	1	8980	8980		44.377	1.981	1	4710900	+		18484	20305	12439	12448	21432	21432					0.08222889028479585
IQEHGKLQRI	10	Unmodified	_IQEHGKLQRI_					0	0	0			REV__nc|ENSG00000156687|Q6UXZ4-2|UNC5D	REV__nc|ENSG00000156687|Q6UXZ4-2|UNC5D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.350341796875	2	611.356754	1220.69895	-0.22744	-0.00013904	-0.12961	-7.924E-05	-0.35705	-0.00021828	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.85981	1	9768	9768		35.152	2.3396	1	8715400	+		18485	20502	12440	12449	21433	21433					0.09743285928607293
IQEHGKLQRI	10	Unmodified	_IQEHGKLQRI_					0	0	0			REV__nc|ENSG00000156687|Q6UXZ4-2|UNC5D	REV__nc|ENSG00000156687|Q6UXZ4-2|UNC5D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3592529296875	2	611.356754	1220.69895	-0.40504	-0.00024762	-0.069959	-4.277E-05	-0.475	-0.00029039	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.86106	2	10185	10173;10185		33.922	7.2287	1	12417000	+		18486	20502	12440	12449	21434;21435	21435					0.09743285928607293
IQEHGKLQRI	10	Unmodified	_IQEHGKLQRI_					0	0	0			REV__nc|ENSG00000156687|Q6UXZ4-2|UNC5D	REV__nc|ENSG00000156687|Q6UXZ4-2|UNC5D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3523559570312	2	611.356754	1220.69895	2.1766	0.0013307	-3.4744	-0.0021241	-1.2977	-0.00079338	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.73395	1	10067	10067		42.864	10.114	1	5823000	+		18487	20502	12440	12449	21436	21436					0.09743285928607293
IQEHGKLQRI	10	Unmodified	_IQEHGKLQRI_					0	0	0			REV__nc|ENSG00000156687|Q6UXZ4-2|UNC5D	REV__nc|ENSG00000156687|Q6UXZ4-2|UNC5D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.360595703125	2	611.356754	1220.69895	0.93149	0.00056947	-1.1574	-0.00070761	-0.22595	-0.00013814	611.3560842580883	95.783	3.9941	96.187	95.298	99.293	0.40451					337	97	4	0	0	0	0.78666	1	11574	11574		40.058	9.7405	1	11629000	+		18488	20502	12440	12449	21437	21437					0.09743285928607293
IQEICMREKP	10	Unmodified	_IQEICMREKP_					0	0	0		ENSG00000180257|ENST00000444460|ZNF816	ENSG00000180257|ENST00000444460|ZNF816	ENSG00000180257|ENST00000444460|ZNF816	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.7583618164062	2	623.817758	1245.62096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.263	1	21.263	20.763	21.763	0								0	0	0	0.45132	1	561	561		42.864	10.052	1				18489	7321	12441	12450	21438	21438					0.007977689567042034
IQELAVDL	8	Unmodified	_IQELAVDL_					0	0	0		ENSG00000103047|ENST00000261778|TANGO6	ENSG00000103047|ENST00000261778|TANGO6	ENSG00000103047|ENST00000261778|TANGO6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.75457763671875	2	450.755475	899.496398	-0.14159	-6.3823E-05	-2.8357	-0.0012782	-2.9773	-0.001342	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.87922	1	7817	7817		31.955	1.4512	1	109620			18490	2048	12442	12451	21439	21439					0.0426296280331826
IQELKANEH	9	Unmodified	_IQELKANEH_					0	0	0		nc|ENSG00000138778|Q02224-3|CENPE;chr4:103163256-103174736|63|39.62|0.34|6.87|-|ENST00000380026|CENPE,CENPE;chr4:103138452-103140256|63|22.33|0.54|5.36|-|ENST00000380026|CENPE,CENPE;ENSG00000138778|ENST00000265148|CENPE	nc|ENSG00000138778|Q02224-3|CENPE	nc|ENSG00000138778|Q02224-3|CENPE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.2879638671875	2	541.285463	1080.55637	0.52269	0.00028293	4.0708	0.0022034	4.5934	0.0024864	541.2875269966385	56.217	0.53543	56.189	55.808	56.344	-0.027279					32	20	2	0	0	0	0.54908	1	5118	5118		49.536	1.6204	1	823680			18491	411	12443	12452	21440	21440					0.019316534665676954
IQENRKRVIL	10	Unmodified	_IQENRKRVIL_					0	0	0		ENSG00000185274|ENST00000333538|GALNT17	ENSG00000185274|ENST00000333538|GALNT17	ENSG00000185274|ENST00000333538|GALNT17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8934936523438	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.4892	2	11284	11284;11345		56.721	7.2795	1	66671000			18492	7697	12444	12453	21441;21442	21441					0.14927834371087556
IQEPGRVKKR	10	Unmodified	_IQEPGRVKKR_					0	0	0			REV__nc|ENSG00000149474|Q9H8E8-2|KAT14	REV__nc|ENSG00000149474|Q9H8E8-2|KAT14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.8731079101562	2	605.872571	1209.73059	-1.2702	-0.00076958	0.43018	0.00026063	-0.84002	-0.00050895	605.8726634233227	100.16	1.4911	100.34	99.884	101.38	0.17199					100	34	4	0	0	0	0.85694	1	10406	10406		21.96	1.013	1	739750	+		18493	20169	12445	12454	21443	21443					0.13411278682542616
IQESEERSIK	10	Unmodified	_IQESEERSIK_					0	0	0			REV__nc|ENSG00000165025|P43405-2|SYK	REV__nc|ENSG00000165025|P43405-2|SYK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.2669372558594	3	406.882337	1217.62518	0.58998	0.00024005	4.3608	0.0017743	4.9508	0.0020144	406.88398999236955	27.393	0.83617	27.218	26.881	27.717	-0.17559					40	18	3	0	0	0	0.37624	1	1560	1560		36.318	4.6834	1	175520	+		18494	21139	12446	12455	21444	21444					0.02507272975617525
IQESWKGNTTS	11	Unmodified	_IQESWKGNTTS_					0	0	0			REV__ENST00000504405.5_1_1:179090818-179090875:-|nuORF	REV__ENST00000504405.5_1_1:179090818-179090875:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.8072509765625	2	625.804217	1249.59388	0.81062	0.00050729	3.0535	0.0019109	3.8641	0.0024182	625.806094224884	74.203	1.1646	74.762	74.455	75.62	0.5589					78	27	4	0	0	0	0.32928	1	8396	8396		67.494	2.0283	1	2889400	+		18495	27859	12447	12456	21445	21445					-0.02093300058481873
IQEVILTLLNL	11	Unmodified	_IQEVILTLLNL_					0	0	0			REV__ENST00000523028.5_1_16:21892164-21910369:-|nuORF;REV__nc|ENSG00000157106|Q96Q15-2|SMG1	REV__nc|ENSG00000157106|Q96Q15-2|SMG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8930053710938	2	634.894846	1267.77514	-1.1756	-0.00074638	-2.7008	-0.0017147	-3.8764	-0.0024611	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.70278	1	11247	11247		28.081	0	1	66671000	+		18496	24874;20528	12448	12457	21446	21446					0.15196244985395424
IQEVRPRQFRL	11	Unmodified	_IQEVRPRQFRL_					0	0	0			REV__nc|ENSG00000035928|P35251|RFC1	REV__nc|ENSG00000035928|P35251|RFC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.2826232910156	3	481.284398	1440.83137	-0.83529	-0.00040201	-1.6318	-0.00078535	-2.4671	-0.0011874	481.2835872163677	101.92	1.5231	101.92	100.91	102.43	0					93	37	3	0	0	0	0.77803	1	10373	10373		15.921	2.9632	1	462650	+		18497	16290	12449	12458	21447	21447					0.12858310665387762
IQFHRSERIS	10	Unmodified	_IQFHRSERIS_					0	0	0			REV__nc|ENSG00000065534|Q15746-4|MYLK	REV__nc|ENSG00000065534|Q15746-4|MYLK	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.89556884765625	3	424.898432	1271.67347	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.563	1	17.484	16.984	17.984	-0.079056								0	0	0	0.45132	1	221	221		30.569	1.9921	1		+		18498	16504	12450	12459	21448	21448					0.048498114061885644
IQFNPPLSEK	10	Unmodified	_IQFNPPLSEK_					0	0	0		nc|ENSG00000165097|Q8NB78-2|KDM1B;ENSG00000165097|ENST00000650836|KDM1B	nc|ENSG00000165097|Q8NB78-2|KDM1B	nc|ENSG00000165097|Q8NB78-2|KDM1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.819091796875	2	586.819138	1171.62372	-0.22632	-0.00013281	0.81066	0.00047571	0.58434	0.0003429	586.8197829891035	54.144	1.2993	54.55	53.861	55.16	0.40663					68	30	4	0	0	0	0.47091	1	5498	5498		58.23	3.4536	1	630730			18499	6044	12451	12460	21449	21449					0.04477683677509958
IQFNPPLSEK	10	Unmodified	_IQFNPPLSEK_					0	0	0		nc|ENSG00000165097|Q8NB78-2|KDM1B;ENSG00000165097|ENST00000650836|KDM1B	nc|ENSG00000165097|Q8NB78-2|KDM1B	nc|ENSG00000165097|Q8NB78-2|KDM1B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	586.819138	1171.62372	-0.43113	-0.00025299	0.75874	0.00044525	0.32762	0.00019225	586.8195578734085	53.944	1.0445	54.529	53.914	54.959	0.58474	-0.010672	-1.3611E-05	NaN	58.23	58	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	759320			18500	6044	12451	12460							0.04477683677509958
IQGEKAAPGGP	11	Unmodified	_IQGEKAAPGGP_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.77392578125	2	512.774731	1023.53491	0.25231	0.00012938	-0.8261	-0.0004236	-0.57379	-0.00029423	512.774198051591	45.3	0.73182	45.281	44.968	45.7	-0.018585					35	16	3	0	0	0	0.32928	1	3559	3559		67.494	1.0644	1	555070	+		18501	21648	12452	12461	21450	21450					0.02408268437852712
IQGISKHP	8	Unmodified	_IQGISKHP_					0	0	0		ENST00000514858.5_1_4:2082849-2194957:-|nuORF;ENSG00000130997|ENST00000511885|POLN	ENST00000514858.5_1_4:2082849-2194957:-|nuORF	ENST00000514858.5_1_4:2082849-2194957:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2555847167969	2	440.255977	878.497401	-1.055	-0.00046445	-0.316	-0.00013912	-1.371	-0.00060357	440.255692333896	66.85	0.64691	66.903	66.553	67.2	0.052376					60	27	3	0	0	0	0.89494	1	5923	5923		37.159	0	1	260280			18502	3706	12453	12462	21451	21451					0.05329221962892916
IQGLKKKSD	9	Unmodified	_IQGLKKKSD_					0	0	0			REV__ENST00000328495.9_1_17:16623938-16667555:+|nuORF	REV__ENST00000328495.9_1_17:16623938-16667555:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.279541015625	2	508.808574	1015.60259	-0.38303	-0.00019489	-3.6518	-0.001858	-4.0348	-0.0020529	508.80774374343616	89.543	1.6067	89.755	89.176	90.782	0.21271					125	37	6	0	0	0	0.20789	1	8868	8868		40.778	5.5774	1	1485200	+		18503	25093	12454	12463	21452	21452					0.09541718368654983
IQGSIAFVIL	10	Unmodified	_IQGSIAFVIL_					0	0	0		nc|ENSG00000123243|Q86UX2|ITIH5;ENSG00000123243|ENST00000397146|ITIH5;nc|ENSG00000123243|Q86UX2-3|ITIH5	nc|ENSG00000123243|Q86UX2|ITIH5	nc|ENSG00000123243|Q86UX2|ITIH5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.82080078125	2	530.823692	1059.63283	-0.88248	-0.00046844	-3.9714	-0.0021081	-4.8539	-0.0025765	530.821384723199	80.761	1.5978	80.761	80.141	81.738	0					159	57	4	0	0	0	0.86718	1	7516	7516		27.882	0	1	2196600			18504	3266	12455	12464	21453	21453					0.10540077033851958
IQGVRLDRVR	10	Unmodified	_IQGVRLDRVR_					0	0	0		nc|ENSG00000196482|P62508-4|ESRRG	nc|ENSG00000196482|P62508-4|ESRRG	nc|ENSG00000196482|P62508-4|ESRRG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	606.871826171875	2	606.370195	1210.72584	-0.46367	-0.00028116	-0.72128	-0.00043736	-1.1849	-0.00071852	606.3696540978959	94.435	3.8289	94.503	93.215	97.044	0.068336					198	90	3	0	0	0	0.86272	1	9823	9823		24.519	1.4767	1	750990			18505	15184	12456	12465	21454	21454					0.12890394539772387
IQHGYWSCAVL	11	Unmodified	_IQHGYWSCAVL_					0	0	0			REV__nc|ENSG00000181885|O95471-2|CLDN7	REV__nc|ENSG00000181885|O95471-2|CLDN7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	638.807861328125	2	638.81079	1275.60703	0.29067	0.00018568	-1.0781	-0.00068867	-0.78738	-0.00050299	638.8099079346237	29.951	0.37255	29.976	29.762	30.135	0.025013					11	8	2	0	0	0	0.69995	1	1524	1524		31.53	0.96095	1	35738	+		18506	22485	12457	12466	21455	21455					-0.019751404800899763
IQHGYWSCAVL	11	Unmodified	_IQHGYWSCAVL_					0	0	0			REV__nc|ENSG00000181885|O95471-2|CLDN7	REV__nc|ENSG00000181885|O95471-2|CLDN7	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	638.81079	1275.60703	-1.0483	-0.00066964	0.090419	5.7761E-05	-0.95784	-0.00061188	638.8106023949607	30.023	0.38485	30.023	29.824	30.208	0	0.077372	0.0014149	NaN	31.53	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47289	+		18507	22485	12457	12466							-0.019751404800899763
IQHGYWSCAVL	11	Unmodified	_IQHGYWSCAVL_					0	0	0			REV__nc|ENSG00000181885|O95471-2|CLDN7	REV__nc|ENSG00000181885|O95471-2|CLDN7	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	638.81079	1275.60703	0.29067	0.00018568	-1.0781	-0.00068867	-0.78738	-0.00050299	638.8099079346237	29.951	0.37255	29.976	29.762	30.135	0.025013	0.030181	-7.8012E-05	NaN	31.53	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35738	+		18508	22485	12457	12466							-0.019751404800899763
IQHGYWSCAVL	11	Unmodified	_IQHGYWSCAVL_					0	0	0			REV__nc|ENSG00000181885|O95471-2|CLDN7	REV__nc|ENSG00000181885|O95471-2|CLDN7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	638.81079	1275.60703	1.0845	0.0006928	-2.048	-0.0013083	-0.96348	-0.00061548	638.8094510996116	29.968	0.44447	29.953	29.754	30.198	-0.015167	0.0065097	-0.0013172	NaN	31.53	16	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31705	+		18509	22485	12457	12466							-0.019751404800899763
IQHPRPITVR	10	Unmodified	_IQHPRPITVR_					0	0	0			REV__ENSG00000072315|ENST00000262839|TRPC5	REV__ENSG00000072315|ENST00000262839|TRPC5	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24737548828125	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.17	1	116.19	115.69	116.69	0.026466								0	0	0	0.45132	1	12759	12759		19.263	0	1		+		18510	16644	12458	12467	21456	21456					0.12079296028082354
IQHQGYPC	8	Unmodified	_IQHQGYPC_					0	0	0		nc|ENSG00000173239|Q5VYY2-2|LIPM;ENSG00000173239|ENST00000404743|LIPM	nc|ENSG00000173239|Q5VYY2-2|LIPM	nc|ENSG00000173239|Q5VYY2-2|LIPM	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.9708251953125	2	473.215995	944.417436	-0.9695	-0.00045878	-2.7925	-0.0013215	-3.762	-0.0017802	473.21463391405393	50.227	0.61591	50.231	49.943	50.559	0.0035973					23	13	2	0	0	0	0.4196	1	4260	4260		33.516	1.5607	1	121610			18511	6845	12459	12468	21457	21457					-0.056995877026110975
IQHQQLSSL	9	Unmodified	_IQHQQLSSL_					0	0	0			REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|2|1|sense	REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|2|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.2916259765625	2	527.288005	1052.56146	0.63154	0.000333	2.9462	0.0015535	3.5778	0.0018865	527.2894037871584	53.195	0.78617	53.609	53.332	54.119	0.4139					38	18	3	0	0	0	0.44421	1	5389	5389		54.776	0.01164	1	995190	+		18512	29465	12460	12469	21458	21458					0.03727957329192577
IQICKKKP	8	Unmodified	_IQICKKKP_					0	0	0			REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2978515625	2	479.29933	956.584108	-0.25174	-0.00012066	-3.0868	-0.0014795	-3.3385	-0.0016001	479.2977080659384	57.467	1.4488	58.023	57.642	59.091	0.55512					79	35	4	0	0	0	0.88944	1	5974	5974		57.811	0	1	5116300	+		18513	19957	12461	12470	21459	21459					0.10407885193103539
IQINELGVWE	10	Unmodified	_IQINELGVWE_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	600.8168334960938	2	600.816596	1199.61864	0.88667	0.00053273	-4.2014	-0.0025243	-3.3148	-0.0019916	600.8137735173015	42.873	0.37984	42.879	42.716	43.095	0.0057487					20	11	2	0	0	0	0.82886	1	2914	2914		37.812	2.1932	1	151850	+		18514	22907	12462	12471	21460	21460					0.02681379814907814
IQKASRRKY	9	Unmodified	_IQKASRRKY_					0	0	0		ENST00000247452.3_1_X:141290827-141290884:-|nuORF	ENST00000247452.3_1_X:141290827-141290884:-|nuORF	ENST00000247452.3_1_X:141290827-141290884:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.3456420898438	2	575.346189	1148.67783	-1.3696	-0.00078799	0.30065	0.00017298	-1.0689	-0.00061501	575.3462227460456	98.573	2.415	98.769	98.2	100.61	0.19585					159	55	5	0	0	0	0.76764	1	10195	10195		34.173	0.25091	1	2256700			18515	9276	12463	12472	21461	21461					0.10943320619730912
IQKAVRHFLL	10	Unmodified	_IQKAVRHFLL_					0	0	0		ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	613.383544921875	2	612.882407	1223.75026	-0.38675	-0.00023703	-4.2598	-0.0026108	-4.6465	-0.0028478	612.8795891868975	104.75	3.6593	104.74	104.15	107.81	-0.014809					295	86	6	0	0	0	0.71042	1	11265	11265		44.117	13.799	1	46932000			18516	1155	12464	12473	21462	21462					0.14733654693304743
IQKAVRHFLL	10	Unmodified	_IQKAVRHFLL_					0	0	0		ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.9221496582031	3	408.92403	1223.75026	-1.7912	-0.00073246	-2.4534	-0.0010033	-4.2446	-0.0017357	408.92296036119325	104.35	2.8249	104.52	103.85	106.67	0.17096					215	70	5	0	0	0	0.86718	1	11048	11048		26.063	0	1	5290200			18517	1155	12464	12473	21463	21463					0.14733654693304743
IQKAVRHFLL	10	Unmodified	_IQKAVRHFLL_					0	0	0		ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.8796997070312	2	612.882407	1223.75026	-1.2473	-0.00076447	-3.4791	-0.0021323	-4.7264	-0.0028967	612.8800479877376	104.48	2.784	104.57	103.95	106.73	0.093857					273	68	6	0	0	0	0.84112	3	10989	10989;11181;11193		37.159	5.3006	1	81450000			18518	1155	12464	12473	21464;21465;21466	21464					0.14733654693304743
IQKCISRGELQ	11	Unmodified	_IQKCISRGELQ_					0	0	0		ENSG00000132718|ENST00000368324|SYT11	ENSG00000132718|ENST00000368324|SYT11	ENSG00000132718|ENST00000368324|SYT11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	638.3428344726562	2	637.847904	1273.68126	0.42263	0.00026957	-4.0812	-0.0026032	-3.6586	-0.0023336	637.8452388757121	43.672	1.1051	43.729	43.397	44.503	0.056744					60	26	3	0	0	0	0.66929	1	3075	3075		36.447	4.9169	1	2414200			18519	3823	12465	12474	21467	21467					0.05536202611438057
IQKDPSRGEW	10	Unmodified	_IQKDPSRGEW_					0	0	0		ENST00000379687.7_1_X:19984558-19984744:-|nuORF	ENST00000379687.7_1_X:19984558-19984744:-|nuORF	ENST00000379687.7_1_X:19984558-19984744:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.83740234375	2	608.309469	1214.60439	-0.2582	-0.00015707	-2.6566	-0.0016161	-2.9149	-0.0017731	608.3086778935912	54.152	0.45892	54.737	54.626	55.085	0.58474					15	10	2	0	0	0	0.37624	1	5558	5558		42.864	31.353	1	297020			18520	10901	12466	12475	21468	21468					0.005667273866038158
IQKESLRRKS	10	Unmodified	_IQKESLRRKS_					0	0	0		ENST00000589178.5_1_18:32844255-32870090:-|nuORF	ENST00000589178.5_1_18:32844255-32870090:-|nuORF	ENST00000589178.5_1_18:32844255-32870090:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	622.8754272460938	2	622.875311	1243.73607	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.402	1	48.309	47.809	48.809	-0.093178								0	0	0	0.45132	1	3684	3684		35.152	4.8343	1				18521	14228	12467	12476	21469	21469					0.12394957474361945
IQKLPARLKM	10	Unmodified	_IQKLPARLKM_					0	0	0			REV__ENST00000460911.5_1_7:148514453-148515082:-|nuORF	REV__ENST00000460911.5_1_7:148514453-148515082:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3798217773438	2	599.378643	1196.74273	0.89993	0.0005394	1.557	0.00093323	2.4569	0.0014726	599.379410135585	103.38	3.1227	103.51	103.01	106.14	0.12621					246	78	5	0	0	0	0.86589	1	10944	10944		29.15	0	1	20012000	+		18522	27018	12468	12477	21470	21470					0.1522317910134916
IQKPLFLSK	9	Unmodified	_IQKPLFLSK_					0	0	0			REV__ENST00000459737.5_1_14:56078878-56079043:+|nuORF	REV__ENST00000459737.5_1_14:56078878-56079043:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.3368530273438	2	537.33951	1072.66447	-1.4822	-0.00079643	0.76431	0.00041069	-0.71786	-0.00038574	537.3396810647548	42.797	0.57951	43.23	43.006	43.586	0.4334					28	13	3	0	0	0	0.096131	1	3826	3826		93.195	5.499	1	1109900	+		18523	26990	12469	12478	21471	21471					0.13104069787777917
IQKQWKSA	8	Unmodified	_IQKQWKSA_					0	0	0			REV__chr15:65922107-65922338|45|13.91|0.52|4.74|-|2|MEGF11,MEGF11|1	REV__chr15:65922107-65922338|45|13.91|0.52|4.74|-|2|MEGF11,MEGF11|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7803955078125	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.85277	1	8237	8237		25.45	1.2474	1	385180	+		18524	15619	12470	12479	21472	21472					0.0558918002569726
IQKRLKTYFKF	11	Unmodified	_IQKRLKTYFKF_					0	0	0		ENSG00000115526|ENST00000264249|CHST10	ENSG00000115526|ENST00000264249|CHST10	ENSG00000115526|ENST00000264249|CHST10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.2995910644531	3	491.297645	1470.87111	-0.76336	-0.00037504	3.6438	0.0017902	2.8804	0.0014152	491.29933539010557	107.82	1.2119	107.82	106.66	107.87	0					54	28	4	0	0	0	0.77803	1	11218	11218		15.921	2.4127	1	112740000			18525	2852	12471	12480	21473	21473					0.15450437616118506
IQKRLKTYFKF	11	Unmodified	_IQKRLKTYFKF_					0	0	0		ENSG00000115526|ENST00000264249|CHST10	ENSG00000115526|ENST00000264249|CHST10	ENSG00000115526|ENST00000264249|CHST10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.2998046875	3	491.297645	1470.87111	-0.07893	-3.8778E-05	1.9009	0.00093388	1.8219	0.00089511	491.29850370213825	107.88	0.56458	107.84	107.36	107.93	-0.042404					36	13	5	0	0	0	0.78351	1	11751	11751		14.779	0.69279	1	140110000			18526	2852	12471	12480	21474	21474					0.15450437616118506
IQKRLKTYFKF	11	Unmodified	_IQKRLKTYFKF_					0	0	0		ENSG00000115526|ENST00000264249|CHST10	ENSG00000115526|ENST00000264249|CHST10	ENSG00000115526|ENST00000264249|CHST10	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	491.297645	1470.87111	1.5862	0.00077931	0.99873	0.00049067	2.585	0.00127	491.29802857581404	107.86	0.44553	107.95	107.57	108.01	0.084457	0.04486	-0.0012226	NaN	15.921	33	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9542600			18527	2852	12471	12480							0.15450437616118506
IQKVAGTWYSL	11	Unmodified	_IQKVAGTWYSL_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3690795898438	2	633.348063	1264.68157	0.90674	0.00057428	-3.2085	-0.0020321	-2.3017	-0.0014578	633.3457369878766	98.023	0.57124	98.183	97.753	98.324	0.16074					19	12	2	0	0	0	0.17502	1	10118	10118		22.58	0	1	65298		+	18528	583	12472	12481	21475	21475					0.05981945602957239
IQKVDLDW	8	Unmodified	_IQKVDLDW_					0	0	0			REV__ENSG00000165801|ENST00000298694|ARHGEF40	REV__ENSG00000165801|ENST00000298694|ARHGEF40	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7818908691406	2	508.7742	1015.53385	-0.48106	-0.00024475	3.5163	0.001789	3.0352	0.0015442	508.7759726187079	48.901	0.64004	49.36	49.025	49.665	0.45983					34	15	3	0	0	0	0.4196	1	4722	4722		24.203	0	1	443050	+		18529	21218	12473	12482	21476	21476					0.02670054068948957
IQKVVQPGIK	10	Unmodified	_IQKVVQPGIK_					0	0	0			REV__ENSG00000178177|ENST00000635767|LCORL	REV__ENSG00000178177|ENST00000635767|LCORL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.3533935546875	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.85934	1	10526	10526		35.618	7.736	1	5963400	+		18530	22262	12474	12483	21477	21477					0.14682857190791765
IQLETSTQ	8	Unmodified	_IQLETSTQ_					0	0	0			REV__nc|ENSG00000151914|Q03001-3|DST	REV__nc|ENSG00000151914|Q03001-3|DST	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.5357971191406	2	460.24019	918.465826	-1.5786	-0.00072655	4.0238	0.0018519	2.4452	0.0011254	460.2403657233965	30.513	0.17657	30.542	30.406	30.582	0.028618					5	3	2	0	0	0	0.4196	1	2003	2003		6.3127	0	1	25977	+		18531	29932	12475	12484	21478	21478					0.0033318441828669165
IQLFLARLFP	10	Unmodified	_IQLFLARLFP_					0	0	0		ENST00000582313.5_1_18:245829-268019:-|nuORF;nc|ENSG00000079134|Q96FV9-2|THOC1;ENST00000578529.5_1_18:214628-260326:-|nuORF;ENSG00000079134|ENST00000261600|THOC1	ENST00000582313.5_1_18:245829-268019:-|nuORF	ENST00000582313.5_1_18:245829-268019:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.5838928222656	3	406.585015	1216.73321	0.73403	0.00029845	-3.1024	-0.0012614	-2.3684	-0.00096296	406.5836501066581	111.89	0.52492	111.96	111.59	112.12	0.069542					42	15	3	0	0	0	0.85633	1	12032	12032		21.686	4.519	1	1799400			18532	1410	12476	12485	21479	21479					0.1335173408749597
IQLFVLYRI	9	Unmodified	_IQLFVLYRI_					0	0	0			REV__ENST00000421674.5_1_15:44177877-44211195:-|nuORF	REV__ENST00000421674.5_1_15:44177877-44211195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8593139648438	2	582.860609	1163.70667	-0.83043	-0.00048403	-1.7777	-0.0010361	-2.6081	-0.0015202	582.8594470867313	109.42	0.19504	109.37	109.25	109.45	-0.049324					20	9	3	0	0	0	0.7932	1	11913	11913		17.365	4.5533	1	1114200	+		18533	26499	12477	12486	21480	21480					0.13136045196188206
IQLHFIHLL	9	Unmodified	_IQLHFIHLL_					0	0	0		ENST00000359358.8_1_18:30253844-30254171:-|nuORF	ENST00000359358.8_1_18:30253844-30254171:-|nuORF	ENST00000359358.8_1_18:30253844-30254171:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3300170898438	2	567.345126	1132.6757	1.4966	0.00084909	1.8517	0.0010505	3.3483	0.0018996	567.3461509855658	92.314	0.51381	92.359	92.154	92.668	0.045456					18	11	3	0	0	0	0.20789	1	9659	9659		17.365	0	1	88483			18534	10425	12478	12487	21481	21481					0.1146689188194614
IQLHRILQTSR	11	Unmodified	_IQLHRILQTSR_					0	0	0			REV__ENSG00000198131|ENST00000687789|ZNF544	REV__ENSG00000198131|ENST00000687789|ZNF544	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6076965332031	3	455.608882	1363.80482	-1.2087	-0.00055071	0.20199	9.203E-05	-1.0067	-0.00045868	455.6088629206426	71.18	2.4746	71.313	70.49	72.965	0.13356					216	101	3	0	0	0	0.73647	1	6410	6410		25.068	0.83596	1	705050	+		18535	23302	12479	12488	21482	21482					0.13746621774066625
IQLILPVS	8	Unmodified	_IQLILPVS_					0	0	0		ENST00000255304.8_1_13:31233032-31233128:+|nuORF	ENST00000255304.8_1_13:31233032-31233128:+|nuORF	ENST00000255304.8_1_13:31233032-31233128:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78790283203125	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.87922	1	2815	2815		31.955	1.4512	1	14534000			18536	9330	12480	12489	21483	21483					0.11308733942325944
IQLILPVS	8	Unmodified	_IQLILPVS_					0	0	0		ENST00000255304.8_1_13:31233032-31233128:+|nuORF	ENST00000255304.8_1_13:31233032-31233128:+|nuORF	ENST00000255304.8_1_13:31233032-31233128:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78802490234375	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.87922	1	2424	2424		31.955	6.5047	1	11532000			18537	9330	12480	12489	21484	21484					0.11308733942325944
IQLLELVV	8	Unmodified	_IQLLELVV_					0	0	0			REV__nc|ENSG00000150995|Q14643-4|ITPR1	REV__nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8009338378906	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.80706	1	3542	3542		19.36	1.0356	1	1516700	+		18538	20229	12481	12490	21485	21485					0.11905003113804469
IQLLLLVEFAH	11	Unmodified	_IQLLLLVEFAH_					0	0	0		nc|ENSG00000164300|Q86VE9-3|SERINC5;nc|ENSG00000164300|Q86VE9-2|SERINC5;nc|ENSG00000164300|Q86VE9|SERINC5;ENSG00000164300|ENST00000507668|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	nc|ENSG00000164300|Q86VE9-3|SERINC5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5972900390625	3	432.595579	1294.76491	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.93	1	102.89	102.39	103.39	-0.047005								0	0	0	0.56276	1	11257	11257		17.167	1.16	1				18539	5948	12482	12491	21486	21486					0.12931682050793825
IQLLQKLTY	9	Unmodified	_IQLLQKLTY_					0	0	0		ENST00000487834.5_1_3:108281971-108308222:-|nuORF;ENSG00000163507|ENST00000295746|CIP2A	ENST00000487834.5_1_3:108281971-108308222:-|nuORF	ENST00000487834.5_1_3:108281971-108308222:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3407592773438	2	560.342249	1118.66995	-0.40673	-0.00022791	-3.2012	-0.0017938	-3.608	-0.0020217	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.74721	1	10864	10864		37.159	7.9891	1	60162000			18540	5809	12483	12492	21487	21487					0.11535748579603933
IQLLQKLTY	9	Unmodified	_IQLLQKLTY_					0	0	0		ENST00000487834.5_1_3:108281971-108308222:-|nuORF;ENSG00000163507|ENST00000295746|CIP2A	ENST00000487834.5_1_3:108281971-108308222:-|nuORF	ENST00000487834.5_1_3:108281971-108308222:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3397827148438	2	560.342249	1118.66995	1.3861	0.00077669	-4.4809	-0.0025108	-3.0948	-0.0017342	560.3396736903244	107.12	0.97542	107.15	106.67	107.65	0.035614					55	22	3	0	0	0	0.72402	1	11709	11709		38.806	5.2906	1	800860			18541	5809	12483	12492	21488	21488					0.11535748579603933
IQLLQKLTY	9	Unmodified	_IQLLQKLTY_					0	0	0		ENST00000487834.5_1_3:108281971-108308222:-|nuORF;ENSG00000163507|ENST00000295746|CIP2A	ENST00000487834.5_1_3:108281971-108308222:-|nuORF	ENST00000487834.5_1_3:108281971-108308222:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3404541015625	2	560.342249	1118.66995	0.39666	0.00022227	-4.1426	-0.0023213	-3.7459	-0.002099	560.3399034928755	102.04	3.4939	102.24	101.58	105.08	0.19484					369	86	7	0	0	0	0.69624	1	11062	11062		40.778	9.2484	1	135510000			18542	5809	12483	12492	21489	21489					0.11535748579603933
IQLSIGVK	8	Unmodified	_IQLSIGVK_					0	0	0		ENSG00000175065|ENST00000308128|DSG4;nc|ENSG00000175065|Q86SJ6-2|DSG4	ENSG00000175065|ENST00000308128|DSG4	ENSG00000175065|ENST00000308128|DSG4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.2354431152344	2	429.276378	856.538203	0.93093	0.00039963	3.7246	0.0015989	4.6555	0.0019985	429.2791294528363	63.189	0.1104	63.217	63.158	63.268	0.028133					6	5	2	0	0	0	0.4196	1	5906	5906		27.882	0	1	27074			18543	6986	12484	12493	21490	21490					0.10419563282528088
IQLSKNKH	8	Unmodified	_IQLSKNKH_					0	0	0			REV__nc|ENSG00000271605|Q7Z6M3-2|MILR1	REV__nc|ENSG00000271605|Q7Z6M3-2|MILR1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.71875	2	484.287808	966.561064	0.78037	0.00037792	0.79173	0.00038343	1.5721	0.00076135	484.28928513871296	99.937	0.88478	100.09	99.764	100.65	0.15073					27	19	2	0	0	0	0.4196	1	10487	10487		20.947	3.582	1	33413	+		18544	23983	12485	12494	21491	21491					0.07644582399996125
IQLVLLIDFAH	11	Unmodified	_IQLVLLIDFAH_					0	0	0		ENST00000491976.1_1_1:31888748-31907043:+|nuORF;ENSG00000111897|ENST00000339697|SERINC1;ENSG00000168528|ENST00000373709|SERINC2;nc|ENSG00000168528|Q96SA4-3|SERINC2;nc|ENSG00000168528|Q96SA4-2|SERINC2;nc|ENSG00000168528|Q96SA4-4|SERINC2	ENST00000491976.1_1_1:31888748-31907043:+|nuORF	ENST00000491976.1_1_1:31888748-31907043:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.18084716796875	3	427.923696	1280.74926	3.1039	0.0013282	1.3255	0.00056722	4.4294	0.0018955	427.9242797405928	102.42	0.55067	102.72	102.39	102.94	0.29865					27	12	3	0	0	0	0.17273	1	12498	12498		17.833	6.7364	1	258270			18545	2621	12486	12495	21492	21492					0.12011395533750147
IQNDRQLQY	9	Unmodified	_IQNDRQLQY_					0	0	0		ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.302001953125	2	589.301644	1176.58874	-0.65258	-0.00038457	0.94058	0.00055428	0.28799	0.00016971	589.302153136171	38.059	0.85391	38.372	38.055	38.909	0.31312					58	21	4	0	0	0	0.039957	3	3095	3095;3106;3117		112.41	41.115	1	3200600			18546	1797	12487	12496	21493;21494;21495	21493					0.0075044086956950196
IQNDRQLQY	9	Unmodified	_IQNDRQLQY_					0	0	0		ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3016357421875	2	589.301644	1176.58874	-0.00045279	-2.6683E-07	0.31848	0.00018768	0.31803	0.00018742	589.3018037936641	37.935	0.94116	38.457	38.138	39.079	0.52236					64	23	4	0	0	0	0.045756	4	3098	3089;3098;3110;3123		109.48	39.851	1	2940500			18547	1797	12487	12496	21496;21497;21498;21499	21497					0.0075044086956950196
IQNFHRLRIL	10	Unmodified	_IQNFHRLRIL_					0	0	0			REV__chr10:89285264-89286872|20|25.55|0.0|21.28|+|2|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|8	REV__chr10:89285264-89286872|20|25.55|0.0|21.28|+|2|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26788330078125	3	437.266568	1308.77787	-0.73822	-0.0003228	3.7045	0.0016198	2.9662	0.001297	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.86151	1	4682	4682		15.333	0.63944	1	3639500	+		18548	15482	12488	12497	21500	21500					0.13583557953529635
IQNKQSLKIH	10	Unmodified	_IQNKQSLKIH_					0	0	0		nc|ENSG00000141497|Q9H091-2|ZMYND15;ENSG00000141497|ENST00000433935|ZMYND15;nc|ENSG00000141497|Q9H091-3|ZMYND15;ENST00000571782.1_1_17:4647099-4647876:+|nuORF	nc|ENSG00000141497|Q9H091-2|ZMYND15	nc|ENSG00000141497|Q9H091-2|ZMYND15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.57476806640625	3	403.575178	1207.70371	-1.7546	-0.00070812	0.79854	0.00032227	-0.95608	-0.00038585	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.76096	1	7966	7966		41.427	2.673	1	1090300			18549	4505	12489	12498	21501	21501					0.10816170071370834
IQPRNPTTRYL	11	Unmodified	_IQPRNPTTRYL_					0	0	0		L1ME1_dup14741|chr8:25510836-25512219:-|5.542688985801943|0.2188578600898351|4.66|63.0|57|3|sense	L1ME1_dup14741|chr8:25510836-25512219:-|5.542688985801943|0.2188578600898351|4.66|63.0|57|3|sense	L1ME1_dup14741|chr8:25510836-25512219:-|5.542688985801943|0.2188578600898351|4.66|63.0|57|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.2189636230469	3	453.589487	1357.74663	-0.086284	-3.9138E-05	1.0896	0.00049423	1.0033	0.00045509	453.58988053388214	19.192	0.47909	18.722	18.495	18.974	-0.46967					19	10	2	0	0	0	0.17586	1	501	501		11.932	0	1	158690			18550	14597	12490	12499	21502	21502					0.08206940128775386
IQQARDRLVAL	11	Unmodified	_IQQARDRLVAL_					0	0	0			REV__nc|ENSG00000136877|Q05932-3|FPGS	REV__nc|ENSG00000136877|Q05932-3|FPGS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.882568359375	2	641.883136	1281.75172	-0.046992	-3.0164E-05	-0.94307	-0.00060534	-0.99006	-0.0006355	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.55601	2	9897	9886;9897		47.96	7.4938	1	2217900	+		18551	19344	12491	12500	21503;21504	21504					0.12211243991396259
IQQARDRLVAL	11	Unmodified	_IQQARDRLVAL_					0	0	0			REV__nc|ENSG00000136877|Q05932-3|FPGS	REV__nc|ENSG00000136877|Q05932-3|FPGS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8822021484375	2	641.883136	1281.75172	1.6823	0.0010798	-2.7332	-0.0017544	-1.051	-0.00067461	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.65746	1	10398	10398		37.812	4.9991	1	3772700	+		18552	19344	12491	12500	21505	21505					0.12211243991396259
IQQARDRLVAL	11	Unmodified	_IQQARDRLVAL_					0	0	0			REV__nc|ENSG00000136877|Q05932-3|FPGS	REV__nc|ENSG00000136877|Q05932-3|FPGS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8823852539062	2	641.883136	1281.75172	0.89498	0.00057447	-2.058	-0.001321	-1.163	-0.00074653	641.8816647321656	95.707	2.6304	95.87	94.248	96.878	0.16316					218	62	4	0	0	0	0.65746	1	9873	9873		37.812	1.3648	1	2156900	+		18553	19344	12491	12500	21506	21506					0.12211243991396259
IQQARDRLVAL	11	Unmodified	_IQQARDRLVAL_					0	0	0			REV__nc|ENSG00000136877|Q05932-3|FPGS	REV__nc|ENSG00000136877|Q05932-3|FPGS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.882080078125	2	641.883136	1281.75172	1.4722	0.00094496	-2.5524	-0.0016383	-1.0802	-0.00069336	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.60058	1	11742	11742		44.377	2.9506	1	4511200	+		18554	19344	12491	12500	21507	21507					0.12211243991396259
IQQINNTIT	9	Unmodified	_IQQINNTIT_					0	0	0			REV__ENSG00000120708|ENST00000442011|TGFBI	REV__ENSG00000120708|ENST00000442011|TGFBI	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2802734375	2	522.787838	1043.56112	-0.63317	-0.00033102	-0.86227	-0.00045078	-1.4954	-0.0007818	522.7862723097608	45.253	1.2158	46.149	45.351	46.567	0.89542					56	29	3	0	0	0	0.20789	1	4162	4162		64.207	23.635	1	2076300	+		18555	18425	12492	12501	21508	21508					0.04108537609317864
IQQLLLPSDKV	11	Unmodified	_IQQLLLPSDKV_					0	0	0			REV__ENSG00000204843|ENST00000628224|DCTN1	REV__ENSG00000204843|ENST00000628224|DCTN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3832397460938	2	627.37682	1252.73909	6.5805	0.0041284	2.5751	0.0016156	9.1556	0.005744	627.3785016354675	112.85	0.36639	112.87	112.77	113.14	0.01696					21	13	2	0	0	0	0.7144	1	13666	13666		29.17	1.2878	1	54970	+		18556	23522	12493	12502	21509	21509					0.12282787808476314
IQQLLLPSDKV	11	Unmodified	_IQQLLLPSDKV_					0	0	0			REV__ENSG00000204843|ENST00000628224|DCTN1	REV__ENSG00000204843|ENST00000628224|DCTN1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3833618164062	2	627.37682	1252.73909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.72	1	115.7	115.2	116.2	-0.016441								0	0	0	0.56276	1	13910	13910		19.104	2.3861	1		+		18557	23522	12493	12502	21510	21510					0.12282787808476314
IQQLLNTLKRP	11	Unmodified	_IQQLLNTLKRP_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;nc|ENSG00000160305|Q14689-3|DIP2A;nc|ENSG00000160305|Q14689-2|DIP2A;nc|ENSG00000160305|Q14689-4|DIP2A;nc|ENSG00000160305|Q14689-5|DIP2A;ENST00000494435.5_1_21:47924311-47965916:+|nuORF;ENST00000549620.5_1_12:50898851-51072694:+|nuORF;ENSG00000066084|ENST00000301180|DIP2B	nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000066084|ENST00000301180|DIP2B	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.93963623046875	3	441.94175	1322.80342	-1.4755	-0.00065207	-2.8855	-0.0012752	-4.3609	-0.0019273	441.9403125343586	55.224	1.199	55.287	54.704	55.903	0.063725					106	39	3	0	0	0	0.76892	1	4624	4624		17.833	2.5	1	485540			18558	5578;1150	12494	12503	21511	21511					0.1549298768529752
IQQPHLTMK	9	Oxidation (M)	_IQQPHLTM(Oxidation (M))K_		IQQPHLTM(1)K		IQQPHLTM(55)K	0	0	1			REV__ENSG00000148948|ENST00000528697|LRRC4C	REV__ENSG00000148948|ENST00000528697|LRRC4C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.2948608398438	2	556.300059	1110.58556	-0.12389	-6.8919E-05	-3.3205	-0.0018472	-3.4444	-0.0019161	556.2981738648185	75.221	0.59676	75.785	75.541	76.138	0.56458					27	14	3	0	0	0	0.44529	1	8533	8533		54.722	12.326	1	558130	+		18559	20144	12495	12504	21512	21512		298			0.03469474491203073
IQQPYNQI	8	Unmodified	_IQQPYNQI_					0	0	0			REV__ENSG00000174718|ENST00000312561|RESF1	REV__ENSG00000174718|ENST00000312561|RESF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.2637023925781	2	502.263999	1002.51345	1.1545	0.00057987	-1.6355	-0.00082147	-0.48104	-0.00024161	502.26301683334236	32.733	1.1059	32.945	32.207	33.313	0.21168					54	25	3	0	0	0	0.60155	1	2343	2343		71.378	18.026	1	374960	+		18560	22009	12496	12505	21513	21513					0.012288834091350509
IQQPYNQI	8	Unmodified	_IQQPYNQI_					0	0	0			REV__ENSG00000174718|ENST00000312561|RESF1	REV__ENSG00000174718|ENST00000312561|RESF1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	502.263999	1002.51345	-0.31696	-0.0001592	-0.14264	-7.1644E-05	-0.4596	-0.00023084	502.2636957529595	32.832	1.2403	32.962	32.077	33.317	0.13069	0.0087965	0.00096619	NaN	71.378	67	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	369340	+		18561	22009	12496	12505							0.012288834091350509
IQQPYNQI	8	Unmodified	_IQQPYNQI_					0	0	0			REV__ENSG00000174718|ENST00000312561|RESF1	REV__ENSG00000174718|ENST00000312561|RESF1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	502.263999	1002.51345	1.1545	0.00057987	-1.6355	-0.00082147	-0.48104	-0.00024161	502.26301683334236	32.733	1.1059	32.945	32.207	33.313	0.21168	-0.0087965	-0.00053347	NaN	71.378	54	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	374960	+		18562	22009	12496	12505							0.012288834091350509
IQRFPVPAV	9	Unmodified	_IQRFPVPAV_					0	0	0		nc|ENSG00000290618|P0DPF6|CDRT15P3	nc|ENSG00000290618|P0DPF6|CDRT15P3	nc|ENSG00000290618|P0DPF6|CDRT15P3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8089599609375	2	513.808377	1025.6022	-0.57846	-0.00029722	2.2736	0.0011682	1.6952	0.000871	513.8095113148362	46.467	0.72382	47.39	47.191	47.915	0.92315					30	16	2	0	0	0	0.5393	1	4411	4411		50.025	4.0726	1	5287500			18563	15339	12497	12506	21514	21514					0.0904234343945518
IQRIQAASPPL	11	Unmodified	_IQRIQAASPPL_					0	0	0		ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8560791015625	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.53361	2	9608	9608;9620		49.536	8.1094	1	18777000			18564	8508	12498	12507	21515;21516	21515					0.10416767697074647
IQRKLQAALIS	11	Unmodified	_IQRKLQAALIS_					0	0	0		nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1;ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1	nc|ENSG00000173230|Q14789-4|GOLGB1	nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	414.26165771484375	3	414.262712	1239.76631	0.012697	5.2598E-06	-1.7284	-0.00071601	-1.7157	-0.00071075	414.2619633265219	17.904	0.49121	17.967	17.792	18.284	0.062601					57	26	3	0	0	0	0.74022	1	282	282		24.232	4.9691	1	554770			18565	6843	12499	12508	21517	21517					0.1560131613955491
IQRKWVYL	8	Unmodified	_IQRKWVYL_					0	0	0		ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3328247070312	2	553.329476	1104.6444	1.115	0.00061697	4.2458	0.0023493	5.3608	0.0029663	553.3316729497465	96.557	1.6944	96.962	96.464	98.158	0.40498					120	40	4	0	0	0	0.9159	1	11603	11603		44.531	7.372	1	3081200			18566	7849	12500	12509	21518	21518					0.09626318847836046
IQRLLNTTRIH	11	Unmodified	_IQRLLNTTRIH_					0	0	0		ENST00000513120.2_1_4:8605677-8612970:+|nuORF;ENST00000514302.5_1_4:8602857-8612970:+|nuORF;nc|ENSG00000109625|Q66K79-3|CPZ;nc|ENSG00000109625|Q66K79-2|CPZ;ENSG00000109625|ENST00000360986|CPZ	ENST00000513120.2_1_4:8605677-8612970:+|nuORF	ENST00000513120.2_1_4:8605677-8612970:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.608642578125	3	455.608882	1363.80482	-1.2087	-0.00055071	0.20199	9.203E-05	-1.0067	-0.00045868	455.6088629206426	71.18	2.4746	71.313	70.49	72.965	0.13356					216	101	3	0	0	0	0.76579	1	6598	6598		18.531	0.69791	1	705050			18567	2471	12501	12510	21519	21519					0.13746621774066625
IQRLLNTTRIH	11	Unmodified	_IQRLLNTTRIH_					0	0	0		ENST00000513120.2_1_4:8605677-8612970:+|nuORF;ENST00000514302.5_1_4:8602857-8612970:+|nuORF;nc|ENSG00000109625|Q66K79-3|CPZ;nc|ENSG00000109625|Q66K79-2|CPZ;ENSG00000109625|ENST00000360986|CPZ	ENST00000513120.2_1_4:8605677-8612970:+|nuORF	ENST00000513120.2_1_4:8605677-8612970:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.604736328125	3	455.608882	1363.80482	0.49166	0.00022401	-1.6077	-0.0007325	-1.1161	-0.0005085	455.608083696801	71.141	2.3916	71.271	70.4	72.791	0.12965					199	101	2	0	0	0	0.75457	1	6633	6633		21.032	1.7696	1	552710			18568	2471	12501	12510	21520	21520					0.13746621774066625
IQRMLSCY	8	Unmodified	_IQRMLSCY_					0	0	0		ENST00000495008.5_1_3:108355483-108366962:+|nuORF;ENSG00000198919|ENST00000361582|DZIP3	ENST00000495008.5_1_3:108355483-108366962:+|nuORF	ENST00000495008.5_1_3:108355483-108366962:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.79241943359375	2	507.24898	1012.48341	0.28175	0.00014292	-0.39949	-0.00020264	-0.11774	-5.9722E-05	507.7494751633901	60.133	0.12906	60.687	60.621	60.75	0.55323					5	3	2	0	0	0	0.4196	1	6379	6379		44.117	16.235	1	100860			18569	8369	12502	12511	21521	21521					-0.022335148520596704
IQRRTRLRLDG	11	Unmodified	_IQRRTRLRLDG_					0	0	0		nc|ENSG00000101180|Q9Y5N1-3|HRH3;nc|ENSG00000101180|Q9Y5N1-4|HRH3;ENSG00000101180|ENST00000340177|HRH3;nc|ENSG00000101180|Q9Y5N1-2|HRH3	nc|ENSG00000101180|Q9Y5N1-3|HRH3	nc|ENSG00000101180|Q9Y5N1-3|HRH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.9480285644531	3	461.947898	1382.82186	1.4853	0.00068611	-0.62277	-0.00028769	0.86249	0.00039843	461.94752150740254	107.41	0.52853	107.52	107.23	107.76	0.10396					75	22	4	0	0	0	0.75121	1	13095	13095		21.78	4.6137	1	1381000			18570	1903	12503	12512	21522	21522					0.14576542379859347
IQRTPKIQV	9	Unmodified	_IQRTPKIQV_					0	0	0		ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	ENSG00000166710|ENST00000648006|B2M	ENSG00000166710|ENST00000648006|B2M	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.8374633789062	2	541.837665	1081.66078	0.022744	1.2324E-05	0.836	0.00045297	0.85874	0.0004653	541.8375708786058	35.971	1.1022	36.222	35.634	36.736	0.25101					76	27	4	0	0	0	0.034797	2	2799	2799;2811		115.49	27.815	1	2361700			18571	6222	12504	12513	21523;21524	21523					0.1232140001393418
IQRTPKIQV	9	Unmodified	_IQRTPKIQV_					0	0	0		ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	ENSG00000166710|ENST00000648006|B2M	ENSG00000166710|ENST00000648006|B2M	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.83740234375	2	541.837665	1081.66078	1.1193	0.00060646	-0.035632	-1.9307E-05	1.0836	0.00058715	541.8370205306147	35.873	1.1831	36.314	35.769	36.952	0.44043					76	29	4	0	0	0	0.15959	1	2777	2777		82.241	5.4664	1	2738500			18572	6222	12504	12513	21525	21525					0.1232140001393418
IQRTPKIQV	9	Unmodified	_IQRTPKIQV_					0	0	0		ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	ENSG00000166710|ENST00000648006|B2M	ENSG00000166710|ENST00000648006|B2M	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	541.837665	1081.66078	-1.4694	-0.00079618	1.1652	0.00063135	-0.3042	-0.00016483	541.8382359321515	36.437	0.59665	36.437	36.181	36.778	0	-0.018602	0.0010713	NaN	115.49	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58181			18573	6222	12504	12513							0.1232140001393418
IQRTPKIQV	9	Unmodified	_IQRTPKIQV_					0	0	0		ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	ENSG00000166710|ENST00000648006|B2M	ENSG00000166710|ENST00000648006|B2M	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	541.837665	1081.66078	-0.76572	-0.00041489	0.26152	0.0001417	-0.5042	-0.00027319	541.8378418372131	36.551	0.62601	36.562	36.213	36.839	0.011173	0.10672	9.1969E-05	NaN	115.49	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65006			18574	6222	12504	12513							0.1232140001393418
IQRTPKIQV	9	Unmodified	_IQRTPKIQV_					0	0	0		ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	ENSG00000166710|ENST00000648006|B2M	ENSG00000166710|ENST00000648006|B2M	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	541.837665	1081.66078	0.26267	0.00014232	-0.26533	-0.00014377	-0.0026643	-1.4436E-06	541.8373997941195	36.288	0.55983	36.391	36.217	36.776	0.10306	-0.064473	-0.00047897	NaN	115.49	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97161			18575	6222	12504	12513							0.1232140001393418
IQRVLYIMK	9	Unmodified	_IQRVLYIMK_					0	0	0		ENST00000366554.2_1_1:241757348-241757720:-|nuORF	ENST00000366554.2_1_1:241757348-241757720:-|nuORF	ENST00000366554.2_1_1:241757348-241757720:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.356201171875	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.55	1	116.53	116.03	117.03	-0.02433								0	0	0	0.31828	1	12908	12908		24.203	1.1603	1				18576	10509	12505	12514	21526	21526					0.1147980131870554
IQRYLEIFRKQ	11	Unmodified	_IQRYLEIFRKQ_					0	0	0			REV__ENST00000466171.1_1_2:118694276-118701638:-|nuORF	REV__ENST00000466171.1_1_2:118694276-118701638:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.9578857421875	3	498.624421	1492.85143	-0.24645	-0.00012288	-2.4102	-0.0012018	-2.6566	-0.0013247	498.62308144457916	21.663	1.0696	21.599	21.115	22.184	-0.064743					82	38	3	0	0	0	0.75121	1	679	679		21.78	5.8598	1	61443	+		18577	18652	12506	12515	21527	21527					0.12472061605330964
IQSERLLRRA	10	Unmodified	_IQSERLLRRA_					0	0	0		ENST00000340648.5_1_21:45114371-45114962:+|nuORF	ENST00000340648.5_1_21:45114371-45114962:+|nuORF	ENST00000340648.5_1_21:45114371-45114962:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.57928466796875	3	414.586077	1240.7364	0.00033788	1.4008E-07	-0.53688	-0.00022258	-0.53654	-0.00022244	414.5860535011273	28.375	0.24644	28.278	28.094	28.34	-0.096947					10	5	3	0	0	0	0.37624	1	1691	1691		10.104	0	1	23530			18578	10235	12507	12516	21528	21528					0.12566377194229972
IQSIVRQLQH	10	Unmodified	_IQSIVRQLQH_					0	0	0		ENSG00000169375|ENST00000394947|SIN3A;ENST00000570021.1_1_15:75676553-75682127:-|nuORF	ENSG00000169375|ENST00000394947|SIN3A	ENSG00000169375|ENST00000394947|SIN3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3515625	2	611.356754	1220.69895	-0.25906	-0.00015838	-0.90242	-0.0005517	-1.1615	-0.00071008	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.86272	1	9284	9284		24.519	0.99649	1	3360200			18579	6491	12508	12517	21529	21529					0.09743285928584555
IQSSKLLLHQ	10	Unmodified	_IQSSKLLLHQ_					0	0	0		ENSG00000183309|ENST00000526926|ZNF623;nc|ENSG00000183309|O75123|ZNF623	ENSG00000183309|ENST00000526926|ZNF623	ENSG00000183309|ENST00000526926|ZNF623	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.845458984375	2	583.84823	1165.68191	0.9749	0.00056919	-2.7648	-0.0016142	-1.7899	-0.001045	583.8462335453149	105.71	0.63963	105.85	105.5	106.14	0.13821					27	16	2	0	0	0	0.86218	1	12907	12907		32.812	0	1	126680			18580	7521	12509	12518	21530	21530					0.1056936532279451
IQSSKLLLHQI	11	Unmodified	_IQSSKLLLHQI_					0	0	0		ENSG00000183309|ENST00000526926|ZNF623;nc|ENSG00000183309|O75123|ZNF623	ENSG00000183309|ENST00000526926|ZNF623	ENSG00000183309|ENST00000526926|ZNF623	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3936767578125	2	640.390262	1278.76597	0.18689	0.00011969	3.8612	0.0024727	4.0481	0.0025923	640.3926444536196	51.078	1.0383	51.513	50.994	52.033	0.43505					62	24	3	0	0	0	0.72739	1	5017	5017		27.047	0.98393	1	1259400			18581	7521	12510	12519	21531	21531					0.13773896419706944
IQSSKSLL	8	Unmodified	_IQSSKSLL_					0	0	0			REV__ENSG00000115548|ENST00000312912|KDM3A	REV__ENSG00000115548|ENST00000312912|KDM3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.261962890625	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.7961	1	3701	3701		17.365	0.89182	1	4268300	+		18582	18128	12511	12520	21532	21532					0.07010669040232642
IQTIQCHLM	9	Unmodified	_IQTIQCHLM_					0	0	0		ENST00000529140.1_1_11:43511716-43515451:+|nuORF;ENSG00000052841|ENST00000039989|TTC17	ENST00000529140.1_1_11:43511716-43515451:+|nuORF	ENST00000529140.1_1_11:43511716-43515451:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.9976196289062	2	543.775362	1085.53617	-0.029796	-1.6202E-05	-4.3127	-0.0023451	-4.3425	-0.0023613	544.273195083612	17.211	0.27285	16.729	16.625	16.898	-0.48256					6	5	2	0	0	0	0.20789	1	247	247		34.173	3.6689	1	22745			18583	1006	12512	12521	21533	21533					-0.0031755678926401743
IQTIQCHLM	9	Unmodified	_IQTIQCHLM_					0	0	0		ENST00000529140.1_1_11:43511716-43515451:+|nuORF;ENSG00000052841|ENST00000039989|TTC17	ENST00000529140.1_1_11:43511716-43515451:+|nuORF	ENST00000529140.1_1_11:43511716-43515451:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	543.775362	1085.53617	0.46779	0.00025437	-3.758	-0.0020435	-3.2902	-0.0017891	544.2725596771202	16.849	0.19362	16.77	16.641	16.834	-0.079056	0.020363	7.7389E-05	NaN	34.173	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30933			18584	1006	12512	12521							-0.0031755678926401743
IQVILGPMF	9	Unmodified	_IQVILGPMF_					0	0	0		ENSG00000167900|ENST00000301634|TK1	ENSG00000167900|ENST00000301634|TK1	ENSG00000167900|ENST00000301634|TK1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.29278564453125	2	509.293714	1016.57287	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.582	1	74.582	74.082	75.082	0								0	0	0	0.31472	1	6728	6728		25.45	2.4077	1				18585	6338	12513	12522	21534	21534					0.06525063098968076
IQVLKYRRLLF	11	Unmodified	_IQVLKYRRLLF_					0	0	0		ENST00000409003.4_2_8:119208954-119209107:-|nuORF	ENST00000409003.4_2_8:119208954-119209107:-|nuORF	ENST00000409003.4_2_8:119208954-119209107:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.6378173828125	3	483.641523	1447.90274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.29	1	119.22	118.72	119.72	-0.07531								0	0	0	0.56276	1	12791	12791		6.001	2.5923	1				18586	11296	12514	12523	21535	21535					0.1967043037006988
IQVRKVPPLKI	11	Unmodified	_IQVRKVPPLKI_					0	0	0		nc|ENSG00000143970|Q76L83-2|ASXL2;ENSG00000143970|ENST00000435504|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.95928955078125	3	430.958852	1289.85473	-0.99486	-0.00042874	4.4806	0.001931	3.4857	0.0015022	430.96067868562477	39.832	1.6893	40.395	39.119	40.809	0.56301					124	39	4	0	0	0	0.7896	1	3381	3381		13.508	2.0533	1	1723300			18587	4680	12515	12524	21536	21536					0.22139356450020387
IQVRKVPPLKI	11	Unmodified	_IQVRKVPPLKI_					0	0	0		nc|ENSG00000143970|Q76L83-2|ASXL2;ENSG00000143970|ENST00000435504|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	430.958852	1289.85473	-1.8802	-0.0008103	5.2462	0.0022609	3.366	0.0014506	430.9610200110193	40.072	1.3657	40.072	39.422	40.788	0	-0.19389	0.0016253	NaN	13.508	112	37	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	716500			18588	4680	12515	12524							0.22139356450020387
IQVRKVPPLKI	11	Unmodified	_IQVRKVPPLKI_					0	0	0		nc|ENSG00000143970|Q76L83-2|ASXL2;ENSG00000143970|ENST00000435504|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	430.958852	1289.85473	0.15696	6.7645E-05	2.0376	0.00087814	2.1946	0.00094578	430.95960079910253	40.455	1.6156	40.424	39.764	41.38	-0.030987	0.15808	-0.002523	NaN	13.508	122	44	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	920230			18589	4680	12515	12524							0.22139356450020387
IQVRKVPPLKI	11	Unmodified	_IQVRKVPPLKI_					0	0	0		nc|ENSG00000143970|Q76L83-2|ASXL2;ENSG00000143970|ENST00000435504|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	430.958852	1289.85473	-1.3425	-0.00057855	3.6651	0.0015795	2.3226	0.001001	430.96035440601867	40.532	1.5074	40.489	39.666	41.173	-0.043697	0.22243	-0.00041894	NaN	13.508	119	39	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	661190			18590	4680	12515	12524							0.22139356450020387
IQVRKVPPLKI	11	Unmodified	_IQVRKVPPLKI_					0	0	0		nc|ENSG00000143970|Q76L83-2|ASXL2;ENSG00000143970|ENST00000435504|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	430.958852	1289.85473	0.40152	0.00017304	1.9963	0.00086031	2.3978	0.0010334	430.95960390876513	40.4	1.5699	40.409	39.73	41.3	0.0092773	0.1429	-0.0025765	NaN	13.508	117	40	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	748450			18591	4680	12515	12524							0.22139356450020387
IQVRKVPPLKI	11	Unmodified	_IQVRKVPPLKI_					0	0	0		nc|ENSG00000143970|Q76L83-2|ASXL2;ENSG00000143970|ENST00000435504|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	430.958852	1289.85473	-1.7125	-0.00073801	5.2296	0.0022538	3.5172	0.0015157	430.9609688907567	40.24	1.3833	40.247	39.598	40.981	0.0065002	-0.019742	0.0016038	NaN	13.508	127	44	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	729270			18592	4680	12515	12524							0.22139356450020387
IQVRKVPPLKI	11	Unmodified	_IQVRKVPPLKI_					0	0	0		nc|ENSG00000143970|Q76L83-2|ASXL2;ENSG00000143970|ENST00000435504|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	430.958852	1289.85473	0.18707	8.0622E-05	3.3505	0.0014439	3.5376	0.0015245	430.96013450503847	39.957	1.4951	40.038	39.451	40.946	0.081345	-0.22801	-0.00082566	NaN	13.508	115	46	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	885260			18593	4680	12515	12524							0.22139356450020387
IQVRKVPPLKI	11	Unmodified	_IQVRKVPPLKI_					0	0	0		nc|ENSG00000143970|Q76L83-2|ASXL2;ENSG00000143970|ENST00000435504|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	430.958852	1289.85473	-0.1378	-5.9384E-05	3.4907	0.0015044	3.3529	0.001445	430.96023105738993	40.119	1.1445	40.071	39.504	40.648	-0.04789	-0.19515	-0.00064438	NaN	13.508	95	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	812480			18594	4680	12515	12524							0.22139356450020387
IQVSPLRRKK	10	Unmodified	_IQVSPLRRKK_					0	0	0		ENST00000277865.4_1_10:88811263-88811500:-|nuORF	ENST00000277865.4_1_10:88811263-88811500:-|nuORF	ENST00000277865.4_1_10:88811263-88811500:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.93353271484375	3	408.934818	1223.78262	0.46238	0.00018908	-2.5602	-0.001047	-2.0978	-0.00085788	408.9337641207	16.291	0.68274	16.267	16.091	16.773	-0.024035					86	29	4	0	0	0	0.86647	1	133	133		28.577	2.5133	1	1069300			18595	9607	12516	12525	21537	21537					0.17968442096275794
IQWEQLATSVS	11	Unmodified	_IQWEQLATSVS_					0	0	0			REV__ENST00000565368.5_1_16:57474764-57481287:-|nuORF	REV__ENST00000565368.5_1_16:57474764-57481287:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	631.399169921875	2	631.324785	1260.63502	1.4444	0.00091191	0.15346	9.6886E-05	1.5979	0.0010088	631.3246359878199	104.41	1.1204	104.58	104.14	105.26	0.17096					36	27	2	0	0	0	0.17385	1	11146	11146		19.104	0	1	116550	+		18596	28855	12517	12526	21538	21538					0.015124609810072798
IQWYAPVTV	9	Unmodified	_IQWYAPVTV_					0	0	0			REV__ENST00000599181.1_1_19:50862995-50864373:-|nuORF	REV__ENST00000599181.1_1_19:50862995-50864373:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.32666015625	2	538.792392	1075.57023	-0.54235	-0.00029221	1.9292	0.0010395	1.3869	0.00074724	538.7947695498929	101.24	0.28769	101.24	101.04	101.32	0					8	6	2	0	0	0	0.20789	1	10293	10293		21.96	4.5949	1	73806	+		18597	18951	12518	12527	21539	21539					0.03546930965649153
IQYSLNGH	8	Unmodified	_IQYSLNGH_					0	0	0		ENST00000451107.3_1_12:95475298-95611245:-|nuORF;nc|ENSG00000180263|Q6ZV73-2|FGD6;ENSG00000180263|ENST00000343958|FGD6	ENST00000451107.3_1_12:95475298-95611245:-|nuORF	ENST00000451107.3_1_12:95475298-95611245:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.5891418457031	2	466.235242	930.45593	-0.1141	-5.3195E-05	0.31559	0.00014714	0.2015	9.3946E-05	466.2352241190157	58.511	0.49821	58.497	58.218	58.717	-0.013733					32	16	3	0	0	0	0.4196	1	5336	5336		45.952	7.1458	1	123500			18598	7322	12519	12528	21540	21540					-0.012079587964194616
IRAACPLG	8	Carbamidomethyl (C)	_IRAAC(Carbamidomethyl (C))PLG_	IRAAC(1)PLG		IRAAC(45)PLG		0	1	0		ENST00000544657.1_1_12:7282564-7282825:-|nuORF	ENST00000544657.1_1_12:7282564-7282825:-|nuORF	ENST00000544657.1_1_12:7282564-7282825:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.2358093261719	2	429.23673	856.458907	-1.7002	-0.00072977	-0.63366	-0.00027199	-2.3338	-0.0010018	429.23632496484737	63.188	2.3667	63.302	62.678	65.045	0.11389					282	104	4	0	0	0	0.9159	1	5541	5541		44.531	7.372	1	6358600			18599	13570	12520	12529	21541	21541	182				0.02493593056726695
IRAAEQATH	9	Unmodified	_IRAAEQATH_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.76312255859375	2	498.764697	995.514842	0.12667	6.3177E-05	-0.13163	-6.565E-05	-0.00496	-2.4739E-06	498.7644366416421	19.524	0.60889	19.054	18.882	19.491	-0.46967					25	12	3	0	0	0	0.44421	1	526	526		54.776	3.4409	1	114940	+		18600	22575	12521	12530	21542	21542					0.01690517497888777
IRAGLIFMP	9	Unmodified	_IRAGLIFMP_					0	0	0		ENSG00000066813|ENST00000329697|ACSM2B;ENSG00000183747|ENST00000573854|ACSM2A	ENSG00000066813|ENST00000329697|ACSM2B	ENSG00000066813|ENST00000329697|ACSM2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8074951171875	2	509.29933	1016.58411	-0.26761	-0.0001363	-0.59947	-0.00030531	-0.86709	-0.00044161	509.80182104860006	82.706	0.20755	83.137	83.004	83.212	0.43108					6	4	2	0	0	0	0.20789	1	9578	9578		25.45	18.257	1	58680			18601	1167	12522	12531	21543	21543					0.07647885193102866
IRAILFRY	8	Unmodified	_IRAILFRY_					0	0	0		ENST00000422653.1_1_9:88385240-88401019:+|nuORF	ENST00000422653.1_1_9:88385240-88401019:+|nuORF	ENST00000422653.1_1_9:88385240-88401019:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.283447265625	2	526.324194	1050.63383	-0.54376	-0.0002862	1.5593	0.00082069	1.0155	0.00053449	526.3248081078178	59.501	0.68998	59.534	59.261	59.951	0.032822					25	16	2	0	0	0	0.4196	1	5508	5508		20.482	0	1	85177			18602	11484	12523	12532	21544	21544					0.110543361934333
IRAKAFLVLL	10	Unmodified	_IRAKAFLVLL_					0	0	0		ENSG00000168038|ENST00000301831|ULK4	ENSG00000168038|ENST00000301831|ULK4	ENSG00000168038|ENST00000301831|ULK4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.2813720703125	2	572.384251	1142.75395	0.36783	0.00021054	-0.27525	-0.00015755	0.092578	5.299E-05	572.3837991620688	64.623	1.6479	65.177	64.128	65.776	0.55386					70	39	2	0	0	0	0.37624	1	6871	6871		30.504	8.8179	1	101810			18603	6361	12524	12533	21545	21545					0.18828324467176571
IRANKLVLSVP	11	Unmodified	_IRANKLVLSVP_					0	0	0			REV__ENST00000541750.1_12:122618368-122620257:+|nuORF	REV__ENST00000541750.1_12:122618368-122620257:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9290771484375	3	403.92744	1208.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.756	1	48.793	48.293	49.293	0.037731								0	0	0	0.56276	1	3734	3734		13.508	0.55046	1		+		18604	22080	12525	12534	21546	21546					0.16446217627867554
IRAQPQDLI	9	Unmodified	_IRAQPQDLI_					0	0	0		ENST00000510450.1_1_3:125688183-125696014:+|nuORF;ENSG00000114547|ENST00000514116|ROPN1B	ENST00000510450.1_1_3:125688183-125696014:+|nuORF	ENST00000510450.1_1_3:125688183-125696014:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.3091430664062	2	527.306198	1052.59784	1.242	0.00065492	-3.6616	-0.0019308	-2.4196	-0.0012758	527.3046705662339	99.127	1.5298	99.174	98.632	100.16	0.047523					112	35	4	0	0	0	0.76255	1	10574	10574		35.618	1.4457	1	1549600			18605	2779	12526	12535	21547	21547					0.07364834225904815
IRCLLKKKY	9	Unmodified	_IRCLLKKKY_					0	0	0		ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8688354492188	2	582.867911	1163.72127	0.10187	5.9377E-05	1.2757	0.00074359	1.3776	0.00080296	582.8686105160244	102.31	0.9475	102.35	101.93	102.88	0.043198					58	22	4	0	0	0	0.7932	1	11034	11034		16.473	0	1	776660			18606	10545	12527	12536	21548	21548					0.14595794072670287
IRDGLSAH	8	Unmodified	_IRDGLSAH_					0	0	0			REV__ENST00000300403.10_1_20:30327313-30327367:+|nuORF	REV__ENST00000300403.10_1_20:30327313-30327367:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.1959533691406	2	434.735409	867.456264	1.6988	0.00073853	-1.6275	-0.00070755	0.071249	3.0975E-05	434.7346988289389	23.943	0.33525	23.368	23.219	23.555	-0.57415					11	7	2	0	0	0	0.4196	1	1141	1141		40.573	0	1	46062	+		18607	24747	12528	12537	21549	21549					0.017234609234265008
IRDLIPKTIM	10	Unmodified	_IRDLIPKTIM_					0	0	0		nc|ENSG00000197959|Q9UQ16-2|DNM3;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000197959|Q9UQ16|DNM3;nc|ENSG00000197959|Q9UQ16-4|DNM3	nc|ENSG00000197959|Q9UQ16-2|DNM3	nc|ENSG00000197959|Q9UQ16-2|DNM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.58074951171875	3	400.577531	1198.71076	3.4037	0.0013634	4.207	0.0016852	7.6107	0.0030487	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.85834	1	13620	13620		22.58	0.89391	1	5321000			18608	8217	12529	12538	21550	21550					0.11935766627584599
IRDRIDLLLL	10	Unmodified	_IRDRIDLLLL_					0	0	0			REV__nc|ENSG00000078725|O60477-3|BRINP1	REV__nc|ENSG00000078725|O60477-3|BRINP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.9326477050781	3	413.930962	1238.77106	0.19564	8.098E-05	3.7972	0.0015718	3.9928	0.0016527	413.93253835270247	43.14	1.6907	43.113	41.995	43.686	-0.026768					75	40	2	0	0	0	0.86409	1	3278	3278		25.126	4.2888	1	425020	+		18609	16770	12530	12539	21551	21551					0.1612220028232514
IREGPVPES	9	Unmodified	_IREGPVPES_					0	0	0			REV__ENST00000265748.6_2_7:36429459-36435956:+|nuORF	REV__ENST00000265748.6_2_7:36429459-36435956:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2637023925781	2	492.261456	982.50836	-1.0817	-0.00053246	2.4372	0.0011997	1.3556	0.00066729	492.26234517087687	28.258	0.57255	28.161	27.84	28.413	-0.096947					21	13	2	0	0	0	0.69624	1	1692	1692		40.778	1.5253	1	121970	+		18610	24498	12531	12540	21552	21552					0.016405795465288975
IREGPVPES	9	Unmodified	_IREGPVPES_					0	0	0			REV__ENST00000265748.6_2_7:36429459-36435956:+|nuORF	REV__ENST00000265748.6_2_7:36429459-36435956:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	492.261456	982.50836	-1.0817	-0.00053246	2.4372	0.0011997	1.3556	0.00066729	492.26234517087687	28.258	0.57255	28.161	27.84	28.413	-0.096947	-0.032811	0.00054354	NaN	40.778	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121970	+		18611	24498	12531	12540							0.016405795465288975
IRELHPPL	8	Unmodified	_IRELHPPL_					0	0	0			REV__ENSG00000198626|ENST00000366574|RYR2;REV__nc|ENSG00000196218|P21817-3|RYR1	REV__ENSG00000198626|ENST00000366574|RYR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7904052734375	2	487.792727	973.5709	-1.4525	-0.00070854	-3.1625	-0.0015427	-4.6151	-0.0022512	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.86791	1	7969	7969		28.254	2.8041	1	503530	+		18612	23347;23105	12532	12541	21553	21553					0.08305770405377189
IRENLVRPG	9	Unmodified	_IRENLVRPG_					0	0	0		ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3110961914062	2	527.311815	1052.60908	0.44959	0.00023708	-1.5212	-0.00080216	-1.0716	-0.00056508	527.3109028538461	79.369	1.1902	79.786	79.02	80.21	0.41621					60	27	3	0	0	0	0.41566	1	9100	9100		56.721	3.7844	1	973190			18613	8578	12533	12542	21554	21554					0.08487656320039605
IREVWPQDP	9	Unmodified	_IREVWPQDP_					0	0	0			REV__ENSG00000172724|ENST00000311925|CCL19	REV__ENSG00000172724|ENST00000311925|CCL19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.2947998046875	2	570.29583	1138.57711	0.12101	6.9013E-05	-0.63505	-0.00036217	-0.51404	-0.00029315	570.2953055763262	62.015	0.69638	61.982	61.637	62.333	-0.033173					55	25	3	0	0	0	0.44421	1	5866	5866		54.776	1.6874	1	814620	+		18614	21850	12534	12543	21555	21555					0.013362438462309001
IREVWPQDP	9	Unmodified	_IREVWPQDP_					0	0	0			REV__ENSG00000172724|ENST00000311925|CCL19	REV__ENSG00000172724|ENST00000311925|CCL19	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.8222045898438	2	570.29583	1138.57711	0.52087	0.00029705	-1.2531	-0.00071462	-0.73219	-0.00041757	570.2950227593519	61.904	0.63083	62.025	61.702	62.333	0.1209					52	26	3	0	0	0	0.20789	1	5376	5376		52.937	12.159	1	523140	+		18615	21850	12534	12543	21556	21556					0.013362438462309001
IRFGIVSLN	9	Unmodified	_IRFGIVSLN_					0	0	0			REV__nc|ENSG00000277734|P01848|TRAC	REV__nc|ENSG00000277734|P01848|TRAC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8033752441406	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.76764	1	8585	8585		34.173	5.023	1	2989000	+		18616	30272	12535	12544	21557	21557					0.08902039576832976
IRFLHIVN	8	Unmodified	_IRFLHIVN_					0	0	0			REV__ENSG00000198707|ENST00000552810|CEP290	REV__ENSG00000198707|ENST00000552810|CEP290	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3086242675781	2	506.308544	1010.60253	-0.56491	-0.00028602	1.2407	0.00062815	0.67575	0.00034214	506.3091538263502	49.365	1.8951	49.341	48.401	50.296	-0.024029					65	42	2	0	0	0	0.85277	1	4244	4244		25.45	0	1	197030	+		18617	23359	12536	12545	21558	21558					0.09765763159327889
IRGAEETKGK	10	Unmodified	_IRGAEETKGK_					0	0	0			REV__ENSG00000146197|ENST00000274938|SCUBE3	REV__ENSG00000146197|ENST00000274938|SCUBE3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.806640625	2	544.806562	1087.59857	0.026613	1.4499E-05	-0.12454	-6.785E-05	-0.097928	-5.3352E-05	544.8064273929182	24.934	1.2168	24.992	24.613	25.83	0.058189					124	57	4	0	0	0	0.014926	1	890	890		127.46	28.832	1	915340	+		18618	19992	12537	12546	21559	21559					0.05827628874953916
IRGAEETKGK	10	Unmodified	_IRGAEETKGK_					0	0	0			REV__ENSG00000146197|ENST00000274938|SCUBE3	REV__ENSG00000146197|ENST00000274938|SCUBE3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	544.8062744140625	2	544.806562	1087.59857	0.15928	8.6776E-05	-0.16821	-9.1643E-05	-0.0089324	-4.8664E-06	544.8063612053201	24.541	0.98756	24.642	24.281	25.269	0.10045					123	49	4	0	0	0	0.12096	4	847	843;847;854;860		98.629	18.498	1	1023100	+		18619	19992	12537	12546	21560;21561;21562;21563	21561					0.05827628874953916
IRGAEETKGK	10	Unmodified	_IRGAEETKGK_					0	0	0			REV__ENSG00000146197|ENST00000274938|SCUBE3	REV__ENSG00000146197|ENST00000274938|SCUBE3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	544.8065795898438	2	544.806562	1087.59857	0.78335	0.00042678	-0.77619	-0.00042287	0.0071598	3.9007E-06	544.8060162221166	24.686	0.87633	24.7	24.336	25.212	0.013996					110	42	4	0	0	0	0.12134	1	846	846		98.582	2.7668	1	1007500	+		18620	19992	12537	12546	21564	21564					0.05827628874953916
IRGAEETKGK	10	Unmodified	_IRGAEETKGK_					0	0	0			REV__ENSG00000146197|ENST00000274938|SCUBE3	REV__ENSG00000146197|ENST00000274938|SCUBE3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	544.806562	1087.59857	0.41149	0.00022418	-0.3772	-0.0002055	0.034291	1.8682E-05	544.8063017118704	24.787	0.48479	24.838	24.602	25.087	0.050451	-0.035365	-0.00014571	NaN	127.46	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61132	+		18621	19992	12537	12546							0.05827628874953916
IRGFVPIFFV	10	Unmodified	_IRGFVPIFFV_					0	0	0			REV__chr4:121818928-121819372|31|10.71|0.03|8.68|-|2|None,CCNA2|2	REV__chr4:121818928-121819372|31|10.71|0.03|8.68|-|2|None,CCNA2|2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8568725585938	2	597.855327	1193.6961	-0.3553	-0.00021242	2.2324	0.0013346	1.8771	0.0011222	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.86452	1	9027	9027		30.504	0	1	1224100	+		18622	15818	12538	12547	21565	21565					0.10700062541741318
IRGGHTAKLH	10	Unmodified	_IRGGHTAKLH_					0	0	0			REV__ENSG00000198931|ENST00000378364|APRT	REV__ENSG00000198931|ENST00000378364|APRT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.316650390625	2	545.317432	1088.62031	-1.4651	-0.00079892	0.057523	3.1368E-05	-1.4075	-0.00076755	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.86225	1	8783	8783		32.751	1.2207	1	4998200	+		18623	23420	12539	12548	21566	21566					0.07954478414171717
IRGGSRVP	8	Unmodified	_IRGGSRVP_					0	0	0		ENST00000503670.5_1_6:30854463-30854742:+|nuORF	ENST00000503670.5_1_6:30854463-30854742:+|nuORF	ENST00000503670.5_1_6:30854463-30854742:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.25421142578125	2	421.253769	840.492984	0.67687	0.00028514	-0.16156	-6.8057E-05	0.51531	0.00021708	421.25351698068755	84.328	1.4775	84.259	83.718	85.196	-0.069313					81	33	3	0	0	0	0.84579	1	8653	8653		24.519	0.31644	1	949480			18624	12888	12540	12549	21567	21567					0.06635757539982023
IRGGSRVP	8	Unmodified	_IRGGSRVP_					0	0	0		ENST00000503670.5_1_6:30854463-30854742:+|nuORF	ENST00000503670.5_1_6:30854463-30854742:+|nuORF	ENST00000503670.5_1_6:30854463-30854742:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.2540283203125	2	421.253769	840.492984	2.7224	0.0011468	-2.0799	-0.00087617	0.6425	0.00027065	421.25268060933485	84.188	1.829	84.247	83.761	85.59	0.059258					100	41	4	0	0	0	0.82658	2	8481	8481;8517		34.173	11.13	1	871350			18625	12888	12540	12549	21568;21569	21568					0.06635757539982023
IRGGVPNK	8	Unmodified	_IRGGVPNK_					0	0	0			REV__nc|ENSG00000187824|Q6QAJ8-2|TMEM220	REV__nc|ENSG00000187824|Q6QAJ8-2|TMEM220	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7549133300781	2	420.756144	839.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.817	1	21.373	20.873	21.873	-0.44324								0	0	0	0.29353	1	825	825		28.254	7.7724	1		+		18626	22955	12541	12550	21570	21570					0.07156641682740883
IRGLEITGRPP	11	Unmodified	_IRGLEITGRPP_					0	0	0			REV__nc|ENSG00000178104|Q5VU43|PDE4DIP	REV__nc|ENSG00000178104|Q5VU43|PDE4DIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.8579711914062	2	604.859129	1207.70371	1.0175	0.00061544	-2.3109	-0.0013978	-1.2935	-0.00078236	604.8577747770171	81.696	1.319	81.841	80.932	82.251	0.14513					44	30	2	0	0	0	0.66858	1	7835	7835		33.922	0	1	478340	+		18627	22254	12542	12551	21571	21571					0.10816170071370834
IRGNKKVE	8	Unmodified	_IRGNKKVE_					0	0	0			REV__ENST00000498260.1_1_6:131894422-131900432:+|nuORF	REV__ENST00000498260.1_1_6:131894422-131900432:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2874755859375	2	472.287808	942.561064	-0.108	-5.1006E-05	-0.19809	-9.3555E-05	-0.30609	-0.00014456	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.87064	1	9975	9975		29.15	2.4566	1	46909000	+		18628	18320	12543	12552	21572	21572					0.0874858239999412
IRGNKKVE	8	Unmodified	_IRGNKKVE_					0	0	0			REV__ENST00000498260.1_1_6:131894422-131900432:+|nuORF	REV__ENST00000498260.1_1_6:131894422-131900432:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28759765625	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.87064	1	10114	10114		29.15	1.2673	1	48574000	+		18629	18320	12543	12552	21573	21573					0.0874858239999412
IRGNREALVPP	11	Unmodified	_IRGNREALVPP_					0	0	0			REV__ENSG00000142949|ENST00000359947|PTPRF	REV__ENSG00000142949|ENST00000359947|PTPRF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3536987304688	2	611.356754	1220.69895	0.21558	0.0001318	-1.4776	-0.00090335	-1.262	-0.00077155	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.66929	1	9835	9835		36.447	0	1	5379900	+		18630	19763	12544	12553	21574	21574					0.09743285928584555
IRGPNPSKVLQ	11	Unmodified	_IRGPNPSKVLQ_					0	0	0		ENSG00000163624|ENST00000295887|CDS1	ENSG00000163624|ENST00000295887|CDS1	ENSG00000163624|ENST00000295887|CDS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.574951171875	3	403.575178	1207.70371	2.7142	0.0010954	-3.6925	-0.0014902	-0.97834	-0.00039483	403.5735867782374	82.542	1.5525	82.601	81.516	83.068	0.059158					87	35	3	0	0	0	0.70847	1	8260	8260		30.139	2.0577	1	371500			18631	5838	12545	12554	21575	21575					0.10816170071370834
IRGPPGLPG	9	Unmodified	_IRGPPGLPG_					0	0	0		nc|ENSG00000188153|P29400|COL4A5;ENSG00000188153|ENST00000328300|COL4A5;ENST00000470339.1_1_X:107683355-107812096:+|nuORF;nc|ENSG00000169031|Q01955-2|COL4A3;nc|ENSG00000169031|Q01955-5|COL4A3;nc|ENSG00000169031|Q01955-4|COL4A3;nc|ENSG00000169031|Q01955-3|COL4A3;ENSG00000169031|ENST00000396578|COL4A3	nc|ENSG00000188153|P29400|COL4A5;nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2578125	2	432.25852	862.502486	0.40609	0.00017553	-1.8282	-0.00079027	-1.4221	-0.00061473	432.2575947247643	68.412	1.5069	68.797	68.224	69.731	0.38482					60	35	2	0	0	0	0.7932	1	7575	7575		26.796	2.2921	1	399210			18632	15084;7908	12546	12555	21576	21576					0.06573525825513116
IRGPVWSVL	9	Unmodified	_IRGPVWSVL_					0	0	0		ENSG00000129204|ENST00000574788|USP6;nc|ENSG00000129204|P35125-3|USP6;ENST00000357482.5_1_17:5035679-5037292:+|nuORF	ENSG00000129204|ENST00000574788|USP6	ENSG00000129204|ENST00000574788|USP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8080444335938	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.7932	1	4675	4675		18.324	0	1	771120			18633	3577	12547	12556	21577	21577					0.09042343439477918
IRGQLNVTG	9	Unmodified	_IRGQLNVTG_					0	0	0			REV__chr1:40454288-40456945|58|17.79|0.91|4.29|+|2|ZFP69B,ZFP69B|1	REV__chr1:40454288-40456945|58|17.79|0.91|4.29|+|2|ZFP69B,ZFP69B|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27783203125	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.77696	1	7771	7771		31.53	2.3803	1	1785900	+		18634	15451	12548	12557	21578	21578					0.060319920203255606
IRGRPWKAS	9	Unmodified	_IRGRPWKAS_					0	0	0		ENST00000248958.4_1_22:21998288-21998567:+|nuORF	ENST00000248958.4_1_22:21998288-21998567:+|nuORF	ENST00000248958.4_1_22:21998288-21998567:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	535.8140258789062	2	535.814525	1069.6145	1.245	0.00066711	4.3092	0.0023089	5.5542	0.002976	535.8171123630409	99.147	1.5743	99.195	98.765	100.34	0.047523					65	36	3	0	0	0	0.7932	1	10586	10586		20.947	1.587	1	436170			18635	9283	12549	12558	21579	21579					0.08247379902491048
IRGSHISGG	9	Unmodified	_IRGSHISGG_					0	0	0			REV__ENSG00000271303|ENST00000381962|SRXN1	REV__ENSG00000271303|ENST00000381962|SRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2417297363281	2	442.240858	882.467164	0.098186	4.3422E-05	0.19163	8.4747E-05	0.28982	0.00012817	442.2407808543281	79.076	2.7507	79.022	77.456	80.207	-0.053558					222	93	4	0	0	0	0.69624	1	7816	7816		40.778	0	1	344800	+		18636	23981	12550	12559	21580	21580					0.02122863297722688
IRGSHISGG	9	Unmodified	_IRGSHISGG_					0	0	0			REV__ENSG00000271303|ENST00000381962|SRXN1	REV__ENSG00000271303|ENST00000381962|SRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2406921386719	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.77244	2	7400	7400;8077		32.812	2.3088	1	1094000	+		18637	23981	12550	12559	21581;21582	21581					0.02122863297722688
IRGSHISGG	9	Unmodified	_IRGSHISGG_					0	0	0			REV__ENSG00000271303|ENST00000381962|SRXN1	REV__ENSG00000271303|ENST00000381962|SRXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2410888671875	2	442.240858	882.467164	-0.73522	-0.00032514	0.71434	0.00031591	-0.020876	-9.2322E-06	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.67345	2	9533	9399;9533		42.396	3.59	1	866900	+		18638	23981	12550	12559	21583;21584	21584					0.02122863297722688
IRGSHISGG	9	Unmodified	_IRGSHISGG_					0	0	0			REV__ENSG00000271303|ENST00000381962|SRXN1	REV__ENSG00000271303|ENST00000381962|SRXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2404479980469	2	442.240858	882.467164	0.21245	9.3954E-05	-0.1421	-6.2841E-05	0.070351	3.1112E-05	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.76255	1	9596	9596		35.618	1.4457	1	1030200	+		18639	23981	12550	12559	21585	21585					0.02122863297722688
IRIFLSGWK	9	Unmodified	_IRIFLSGWK_					0	0	0		ENSG00000188676|ENST00000502986|IDO2	ENSG00000188676|ENST00000502986|IDO2	ENSG00000188676|ENST00000502986|IDO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3409423828125	2	560.337301	1118.66005	1.6683	0.00093481	3.5343	0.0019804	5.2026	0.0029152	560.3391894187363	89.567	3.3537	89.494	86.948	90.302	-0.07238					131	78	3	0	0	0	0.76764	1	9236	9236		34.173	2.6427	1	1075700			18640	7948	12551	12560	21586	21586					0.10546605364902462
IRIIYALFSLT	11	Unmodified	_IRIIYALFSLT_					0	0	0			REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26788330078125	3	437.267463	1308.78056	-0.097307	-4.2549E-05	0.85982	0.00037597	0.76251	0.00033342	437.26771910027475	53.737	1.8842	53.732	52.971	54.855	-0.0053673					190	57	5	0	0	0	0.7896	1	4686	4686		13.508	0	1	2126600	+		18641	23119	12552	12561	21587	21587					0.13851968567837503
IRIIYALFSLT	11	Unmodified	_IRIIYALFSLT_					0	0	0			REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.267333984375	3	437.267463	1308.78056	-0.13248	-5.7929E-05	0.78917	0.00034508	0.65669	0.00028715	437.26771661657114	51.155	1.5796	51.59	50.873	52.452	0.43505					109	37	4	0	0	0	0.74771	1	5034	5034		22.562	3.5953	1	2614800	+		18642	23119	12552	12561	21588	21588					0.13851968567837503
IRIKLYFKYLK	11	Unmodified	_IRIKLYFKYLK_					0	0	0		Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.9802551269531	3	495.649907	1483.92789	-0.71005	-0.00035193	3.7503	0.0018589	3.0403	0.0015069	495.9861261767702	18.439	0.3647	18.483	18.221	18.586	0.044048					22	16	2	0	0	0	0.18318	1	301	301		6.001	4.8528	1	52585			18643	14	12553	12562	21589	21589					0.2052848517264465
IRIKLYFKYLK	11	Unmodified	_IRIKLYFKYLK_					0	0	0		Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	495.649907	1483.92789	0.077289	3.8308E-05	4.2203	0.0020918	4.2976	0.0021301	495.985602715813	18.477	0.2474	18.544	18.407	18.655	0.066298	0.086698	0.0018833	NaN	6.001	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99724			18644	14	12553	12562							0.2052848517264465
IRIKLYFKYLK	11	Unmodified	_IRIKLYFKYLK_					0	0	0		Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	495.649907	1483.92789	0.75625	0.00037484	2.2603	0.0011203	3.0165	0.0014951	495.98551087824404	18.368	0.53882	18.344	18.116	18.655	-0.024035	-0.11273	-0.0010313	NaN	6.001	34	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139640			18645	14	12553	12562							0.2052848517264465
IRIPGFRQQF	10	Unmodified	_IRIPGFRQQF_					0	0	0			REV__nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	REV__nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	631.3565673828125	2	631.361839	1260.70913	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.34	1	60.34	59.84	60.84	0								0	0	0	0.45132	1	5283	5283		26.693	2.1737	1		+		18646	16862	12554	12563	21590	21590					0.08919893653842337
IRIPILISIIV	11	Unmodified	_IRIPILISIIV_					0	0	0		nc|ENSG00000106018|P41587-2|VIPR2;ENSG00000106018|ENST00000262178|VIPR2	nc|ENSG00000106018|P41587-2|VIPR2	nc|ENSG00000106018|P41587-2|VIPR2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2882385253906	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.157	1	72.117	71.617	72.617	-0.04039								0	0	0	0.56276	1	7040	7040		10.104	0.45776	1				18647	2274	12555	12564	21591	21591					0.2388572236127402
IRITTQNWK	9	Unmodified	_IRITTQNWK_					0	0	0		L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|30|3|sense	L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|30|3|sense	L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|30|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.3323364257812	2	580.332747	1158.65094	0.33138	0.00019231	-0.63307	-0.00036739	-0.30168	-0.00017508	580.3322507801092	39.778	0.78229	39.866	39.53	40.312	0.088375					57	19	4	0	0	0	0.67345	1	2495	2495		42.396	3.1433	1	1035100			18648	14525	12556	12565	21592	21592					0.0779621200854308
IRKCPCRLKVK	11	Unmodified	_IRKCPCRLKVK_					0	0	0			REV__ENSG00000170448|ENST00000507489|NFXL1	REV__ENSG00000170448|ENST00000507489|NFXL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.609130859375	3	448.60906	1342.80535	-1.3621	-0.00061104	2.1255	0.00095354	0.76347	0.0003425	448.6097970890054	75.668	1.3969	75.668	74.988	76.385	0					143	49	4	0	0	0	0.77205	1	6889	6889		17.167	1.8293	1	388770	+		18649	21661	12557	12566	21593	21593					0.14766001897874048
IRKFFGVIPS	10	Unmodified	_IRKFFGVIPS_					0	0	0		nc|ENSG00000035928|P35251|RFC1;ENSG00000035928|ENST00000349703|RFC1;ENST00000504849.5_1_4:39324953-39367861:-|nuORF	nc|ENSG00000035928|P35251|RFC1	nc|ENSG00000035928|P35251|RFC1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3525390625	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.64	1	114.61	114.11	115.11	-0.024452								0	0	0	0.45132	1	12705	12705		29.15	2.4566	1				18650	900	12558	12567	21594	21594					0.11142874536380987
IRKFPRAM	8	Unmodified	_IRKFPRAM_					0	0	0		chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80426025390625	2	509.802571	1017.59059	-0.93407	-0.00047619	3.3261	0.0016956	2.392	0.0012194	509.8042014095356	84.682	2.4835	84.682	83.134	85.618	0					128	59	3	0	0	0	0.86288	1	8095	8095		26.796	1.222	1	609880			18651	424	12559	12568	21595	21595					0.08249823144478796
IRKFPRAM	8	Unmodified	_IRKFPRAM_					0	0	0		chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8035583496094	2	509.802571	1017.59059	-0.89954	-0.00045859	3.2332	0.0016483	2.3337	0.0011897	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.88915	2	8215	8215;8317		35.201	4.6971	1	1874600			18652	424	12559	12568	21596;21597	21596					0.08249823144478796
IRKFPRAM	8	Unmodified	_IRKFPRAM_					0	0	0		chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.803955078125	2	509.802571	1017.59059	0.9788	0.00049899	1.2524	0.00063846	2.2312	0.0011375	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.884	1	8736	8736		33.516	4.366	1	979740			18653	424	12559	12568	21598	21598					0.08249823144478796
IRKFPRAM	8	Unmodified	_IRKFPRAM_					0	0	0		chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8038330078125	2	509.802571	1017.59059	1.253	0.0006388	1.0003	0.00050997	2.2534	0.0011488	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.9159	1	9011	9011		44.531	5.7249	1	3243500			18654	424	12559	12568	21599	21599					0.08249823144478796
IRKFPRAM	8	Unmodified	_IRKFPRAM_					0	0	0		chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	chr4:54234498-54258757|21|20.43|0.0|20.96|+|0|None,PDGFRA|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8034973144531	2	509.802571	1017.59059	-0.073627	-3.7535E-05	2.3064	0.0011758	2.2327	0.0011383	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.88915	1	10264	10264		35.201	6.0512	1	3087300			18655	424	12559	12568	21600	21600					0.08249823144478796
IRKFPTPPA	9	Unmodified	_IRKFPTPPA_					0	0	0		ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8089599609375	2	513.808377	1025.6022	-0.43911	-0.00022562	1.5531	0.00079801	1.114	0.00057239	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.76764	1	4260	4260		34.173	2.2177	1	1606900			18656	8748	12560	12569	21601	21601					0.09042343439477918
IRKFPTPPA	9	Unmodified	_IRKFPTPPA_					0	0	0		ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8087158203125	2	513.808377	1025.6022	-0.18035	-9.2668E-05	1.1688	0.00060056	0.98848	0.00050789	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.77546	1	4239	4239		31.955	2.8053	1	1777300			18657	8748	12560	12569	21602	21602					0.09042343439477918
IRKFPTPPA	9	Unmodified	_IRKFPTPPA_					0	0	0		ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8087158203125	2	513.808377	1025.6022	-0.26337	-0.00013532	1.4503	0.00074519	1.187	0.00060987	513.8089696081398	52.202	2.125	52.215	51.482	53.607	0.012436					136	54	4	0	0	0	0.67345	1	4549	4549		42.396	0	1	732880			18658	8748	12560	12569	21603	21603					0.09042343439477918
IRKFPTPPA	9	Unmodified	_IRKFPTPPA_					0	0	0		ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8090209960938	2	513.808377	1025.6022	-0.30203	-0.00015519	1.5478	0.00079525	1.2457	0.00064007	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.77546	2	4227	4189;4227		31.955	6.5047	1	861580			18659	8748	12560	12569	21604;21605	21605					0.09042343439477918
IRKFPTPPA	9	Unmodified	_IRKFPTPPA_					0	0	0		ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8091430664062	2	513.808377	1025.6022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.255	1	47.178	46.678	47.678	0.92315								0	0	0	0.28386	1	4363	4363		37.159	8.0096	1				18660	8748	12560	12569	21606	21606					0.09042343439477918
IRKFTFKS	8	Unmodified	_IRKFTFKS_					0	0	0			REV__nc|ENSG00000065000|O14617-4|AP3D1	REV__nc|ENSG00000065000|O14617-4|AP3D1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8086547851562	2	513.808377	1025.6022	-1.3833	-0.00071076	2.6514	0.0013623	1.2681	0.00065157	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.89494	1	4318	4318		37.159	6.6555	1	1148600	+		18661	16489	12561	12570	21607	21607					0.09042343439477918
IRKFTFKS	8	Unmodified	_IRKFTFKS_					0	0	0			REV__nc|ENSG00000065000|O14617-4|AP3D1	REV__nc|ENSG00000065000|O14617-4|AP3D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8092041015625	2	513.808377	1025.6022	-0.30203	-0.00015519	1.5478	0.00079525	1.2457	0.00064007	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.84341	1	4251	4251		24.203	1.1603	1	861580	+		18662	16489	12561	12570	21608	21608					0.09042343439477918
IRKFTKGF	8	Unmodified	_IRKFTKGF_					0	0	0			REV__ENSG00000203872|ENST00000388923|C6orf163	REV__ENSG00000203872|ENST00000388923|C6orf163	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.80340576171875	2	498.803094	995.591636	-0.601	-0.00029978	1.7229	0.00085937	1.1219	0.00055959	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.86791	4	4581	4549;4560;4570;4581		49.442	5.3247	1	2240900	+		18663	23442	12562	12571	21609;21610;21611;21612	21612					0.09366360785043071
IRKFTKGF	8	Unmodified	_IRKFTKGF_					0	0	0			REV__ENSG00000203872|ENST00000388923|C6orf163	REV__ENSG00000203872|ENST00000388923|C6orf163	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8034973144531	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.86791	1	4509	4509		28.254	1.4582	1	2702800	+		18664	23442	12562	12571	21613	21613					0.09366360785043071
IRKFTKGF	8	Unmodified	_IRKFTKGF_					0	0	0			REV__ENSG00000203872|ENST00000388923|C6orf163	REV__ENSG00000203872|ENST00000388923|C6orf163	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.8034362792969	2	498.803094	995.591636	-0.60409	-0.00030132	1.8273	0.00091145	1.2232	0.00061013	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.90465	1	4206	4206		40.573	3.4135	1	2424700	+		18665	23442	12562	12571	21614	21614					0.09366360785043071
IRKGILKFF	9	Unmodified	_IRKGILKFF_					0	0	0		ENSG00000167359|ENST00000380211|OR51I1	ENSG00000167359|ENST00000380211|OR51I1	ENSG00000167359|ENST00000380211|OR51I1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	561.3619995117188	2	561.363319	1120.71209	-0.54951	-0.00030848	1.3579	0.00076227	0.80838	0.00045379	561.3639017095335	46.054	1.012	46.025	45.497	46.509	-0.028782					47	23	3	0	0	0	0.7932	1	3722	3722		13.775	0.81615	1	192690			18666	6288	12563	12572	21615	21615					0.15655768778628953
IRKHTTLTT	9	Unmodified	_IRKHTTLTT_					0	0	0			REV__nc|ENSG00000250312|Q3SXZ3-2|ZNF718	REV__nc|ENSG00000250312|Q3SXZ3-2|ZNF718	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	535.81396484375	2	535.819473	1069.62439	-1.4984	-0.00080286	-2.3777	-0.001274	-3.876	-0.0020769	535.8186242164743	99.127	1.4411	99.313	98.898	100.34	0.18582					51	33	2	0	0	0	0.78983	1	10277	10277		27.882	1.1893	1	393170	+		18667	23870	12564	12573	21616	21616					0.09236523117215256
IRKIDPALVW	10	Unmodified	_IRKIDPALVW_					0	0	0		ENST00000602508.1_1_X:71997439-71997757:+|nuORF	ENST00000602508.1_1_X:71997439-71997757:+|nuORF	ENST00000602508.1_1_X:71997439-71997757:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.8732299804688	2	605.868966	1209.72338	2.1215	0.0012854	3.5656	0.0021603	5.6871	0.0034456	605.870912508801	99.925	1.6378	100.29	99.878	101.52	0.36292					110	40	4	0	0	0	0.86763	1	12124	12124		26.693	4.733	1	1159400			18668	14407	12565	12574	21617	21617					0.12690546082126275
IRKIKEITDS	10	Unmodified	_IRKIKEITDS_					0	0	0			REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.8583984375	2	601.858795	1201.70304	-0.24099	-0.00014504	-1.5802	-0.00095104	-1.8212	-0.0010961	601.8577844533773	103.4	2.3202	103.45	103.07	105.39	0.041481					122	55	4	0	0	0	0.86348	1	11193	11193		31.53	5.9558	1	1412200	+		18669	16960	12566	12575	21618	21618					0.11025330631650831
IRKIKEITDS	10	Unmodified	_IRKIKEITDS_					0	0	0			REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.8580932617188	2	601.858795	1201.70304	1.0107	0.00060827	-2.806	-0.0016888	-1.7953	-0.0010805	601.8569689467788	103.23	2.1882	103.41	103.08	105.27	0.18297					123	54	4	0	0	0	0.86348	1	10892	10892		31.53	1.2121	1	2928900	+		18670	16960	12566	12575	21619	21619					0.11025330631650831
IRKIKEITDS	10	Unmodified	_IRKIKEITDS_					0	0	0			REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	601.8572998046875	2	601.858795	1201.70304	0.90226	0.00054303	-2.5932	-0.0015607	-1.6909	-0.0010177	601.8571228928912	103.35	2.581	103.48	103.09	105.68	0.12622					132	64	4	0	0	0	0.86348	1	10913	10913		31.53	1.0262	1	2471100	+		18671	16960	12566	12575	21620	21620					0.11025330631650831
IRKIKRADP	9	Unmodified	_IRKIKRADP_					0	0	0		ENSG00000044459|ENST00000380647|CNTLN;nc|ENSG00000044459|Q9NXG0|CNTLN	ENSG00000044459|ENST00000380647|CNTLN	ENSG00000044459|ENST00000380647|CNTLN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.8532104492188	2	548.851107	1095.68766	-1.5484	-0.00084986	4.449	0.0024418	2.9005	0.001592	548.8534163902094	40.343	1.3609	40.932	40.303	41.664	0.58915					102	36	4	0	0	0	0.77244	1	3466	3466		32.812	1.2826	1	5413900			18672	948	12567	12576	21621	21621					0.14364508625112649
IRKKTKII	8	Unmodified	_IRKKTKII_					0	0	0		ENSG00000165813|ENST00000369287|CCDC186	ENSG00000165813|ENST00000369287|CCDC186	ENSG00000165813|ENST00000369287|CCDC186	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.3554382324219	2	500.355494	998.696435	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.02	1	116.95	116.45	117.45	-0.064972								0	0	0	0.31173	1	14003	14003		3.6843	0	1				18673	6128	12568	12577	21622	21622					0.19703482261604677
IRKLKTFIF	9	Unmodified	_IRKLKTFIF_					0	0	0		ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3;nc|ENSG00000158486|Q8TD57-3|DNAH3;ENST00000572640.5_1_16:21008599-21073979:-|nuORF	ENSG00000158486|ENST00000698260|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.3767700195312	2	583.376426	1164.7383	-0.45026	-0.00026267	0.67755	0.00039527	0.22729	0.00013259	583.376632963045	43.234	2.1571	43.207	42.716	44.873	-0.026764					170	50	4	0	0	0	0.7932	1	3270	3270		24.203	4.206	1	3607200			18674	5483	12569	12578	21623	21623					0.16252037950107479
IRKLKTFIF	9	Unmodified	_IRKLKTFIF_					0	0	0		ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3;nc|ENSG00000158486|Q8TD57-3|DNAH3;ENST00000572640.5_1_16:21008599-21073979:-|nuORF	ENSG00000158486|ENST00000698260|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.3762817382812	2	583.376426	1164.7383	-1.5001	-0.00087515	1.6698	0.00097414	0.16968	9.8985E-05	583.377167478274	43.306	1.3189	43.306	42.851	44.17	0.00016785					106	31	4	0	0	0	0.7932	1	3314	3314		19.36	1.0356	1	2643900			18675	5483	12569	12578	21624	21624					0.16252037950107479
IRKLLLQLLK	10	Unmodified	_IRKLLLQLLK_					0	0	0		ENST00000475034.1_1_3:76360291-76360369:+|nuORF	ENST00000475034.1_1_3:76360291-76360369:+|nuORF	ENST00000475034.1_1_3:76360291-76360369:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.1943359375	2	619.439558	1236.86456	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.943	1	52.61	52.11	53.11	0.66729								0	0	0	0.45132	1	5201	5201		6.7355	3.8061	1				18676	12315	12570	12579	21625	21625					0.2556054445542486
IRKLTKNEKNL	11	Unmodified	_IRKLTKNEKNL_					0	0	0			REV__nc|ENSG00000187164|A0MZ66-8|SHTN1	REV__nc|ENSG00000187164|A0MZ66-8|SHTN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.9482421875	3	452.948904	1355.82488	0.75692	0.00034285	-2.1261	-0.00096303	-1.3692	-0.00062018	452.94782570061545	106.9	1.1199	106.99	106.6	107.72	0.091255					115	26	5	0	0	0	0.73277	2	11432	11432;11528		25.892	7.3607	1	5690500	+		18677	22906	12571	12580	21626;21627	21626					0.16120372714044606
IRKNSLLDHRL	11	Unmodified	_IRKNSLLDHRL_					0	0	0		nc|ENSG00000237456|Q14602|ID2B	nc|ENSG00000237456|Q14602|ID2B	nc|ENSG00000237456|Q14602|ID2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6085510253906	3	455.608882	1363.80482	-1.2148	-0.00055347	0.11639	5.3026E-05	-1.0984	-0.00050044	455.6088555000252	68.308	1.0125	68.443	67.92	68.932	0.13521					65	38	2	0	0	0	0.71803	1	6126	6126		28.577	8.5463	1	184950			18678	15277	12572	12581	21628	21628					0.13746621774066625
IRKNSLLDHRL	11	Unmodified	_IRKNSLLDHRL_					0	0	0		nc|ENSG00000237456|Q14602|ID2B	nc|ENSG00000237456|Q14602|ID2B	nc|ENSG00000237456|Q14602|ID2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.9427185058594	3	455.608882	1363.80482	0.49166	0.00022401	-1.6077	-0.0007325	-1.1161	-0.0005085	455.608083696801	71.141	2.3916	71.271	70.4	72.791	0.12965					199	101	2	0	0	0	0.69071	1	6407	6407		33.039	7.9716	1	552710			18679	15277	12572	12581	21629	21629					0.13746621774066625
IRKNSLLDHRL	11	Unmodified	_IRKNSLLDHRL_					0	0	0		nc|ENSG00000237456|Q14602|ID2B	nc|ENSG00000237456|Q14602|ID2B	nc|ENSG00000237456|Q14602|ID2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6083679199219	3	455.608882	1363.80482	-0.20528	-9.3526E-05	-0.84962	-0.00038709	-1.0549	-0.00048062	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.74771	1	7327	7327		22.562	1.7244	1	1835000			18680	15277	12572	12581	21630	21630					0.13746621774066625
IRKNSLLDHRL	11	Unmodified	_IRKNSLLDHRL_					0	0	0		nc|ENSG00000237456|Q14602|ID2B	nc|ENSG00000237456|Q14602|ID2B	nc|ENSG00000237456|Q14602|ID2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6087341308594	3	455.608882	1363.80482	-0.02024	-9.2214E-06	-1.0093	-0.00045987	-1.0296	-0.00046909	455.608304720296	65.806	3.5163	66.359	63.877	67.393	0.5526					173	94	4	0	0	0	0.70278	1	6963	6963		31.068	3.4242	1	1863500			18681	15277	12572	12581	21631	21631					0.13746621774066625
IRKNSLLDHRL	11	Unmodified	_IRKNSLLDHRL_					0	0	0		nc|ENSG00000237456|Q14602|ID2B	nc|ENSG00000237456|Q14602|ID2B	nc|ENSG00000237456|Q14602|ID2B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	455.608882	1363.80482	-1.0737	-0.00048917	-0.24921	-0.00011354	-1.3229	-0.00060271	455.60880375027847	68.591	0.98189	68.651	68.184	69.166	0.059288	0.15759	0.00060512	NaN	28.577	85	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181220			18682	15277	12572	12581							0.13746621774066625
IRKPIDYTIL	10	Unmodified	_IRKPIDYTIL_					0	0	0		ENSG00000138443|ENST00000261018|ABI2;nc|ENSG00000138443|Q9NYB9|ABI2;nc|ENSG00000138443|Q9NYB9-3|ABI2;ENST00000441061.5_2_2:204231693-204292072:+|nuORF;nc|ENSG00000138443|Q9NYB9-4|ABI2;nc|ENSG00000138443|Q9NYB9-2|ABI2;ENST00000376135.5_1_2:204193204-204247972:+|nuORF	ENSG00000138443|ENST00000261018|ABI2	ENSG00000138443|ENST00000261018|ABI2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.25238037109375	3	411.251813	1230.73361	1.1405	0.00046905	0.14435	5.9365E-05	1.2849	0.00052842	411.2518036890788	34.264	1.089	34.569	34.2	35.289	0.30495					78	26	4	0	0	0	0.69342	1	2584	2584		45.022	6.2686	1	1640900			18683	4296	12573	12582	21632	21632					0.12747109016709146
IRKTRKQKYFY	11	Unmodified	_IRKTRKQKYFY_					0	0	0		ENST00000416636.2_1_7:23624683-23625604:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2;ENSG00000176444|ENST00000368361|CLK2	ENST00000416636.2_1_7:23624683-23625604:-|nuORF	ENST00000416636.2_1_7:23624683-23625604:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.75042724609375	3	510.968299	1529.88307	-1.0915	-0.00055771	0.52844	0.00027002	-0.56304	-0.0002877	510.9692085218808	41.49	0.77758	42.124	41.85	42.627	0.6339					29	20	2	0	0	0	0.18318	1	3713	3713		6.001	2.5923	1	320300			18684	7081	12574	12583	21633	21633					0.13932054359293033
IRKVLNREM	9	Unmodified	_IRKVLNREM_					0	0	0		ENSG00000196376|ENST00000360388|SLC35F1	ENSG00000196376|ENST00000360388|SLC35F1	ENSG00000196376|ENST00000360388|SLC35F1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	579.8438110351562	2	579.842425	1157.6703	-1.355	-0.00078567	4.169	0.0024174	2.814	0.0016317	579.8447437223629	102.17	1.0869	102.31	101.93	103.02	0.13569					79	26	4	0	0	0	0.7932	1	10769	10769		25.574	2.0514	1	2038000			18685	8047	12575	12584	21634	21634					0.09776845027795389
IRLDVLITY	9	Unmodified	_IRLDVLITY_					0	0	0		nc|ENSG00000152061|Q5R372-2|RABGAP1L	nc|ENSG00000152061|Q5R372-2|RABGAP1L	nc|ENSG00000152061|Q5R372-2|RABGAP1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3324584960938	2	553.334424	1104.6543	-0.75754	-0.00041917	-2.8743	-0.0015905	-3.6319	-0.0020096	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.7932	1	10285	10285		23.042	2.0956	1	4355400			18686	14993	12576	12585	21635	21635					0.10615462062582992
IRLDVLITY	9	Unmodified	_IRLDVLITY_					0	0	0		nc|ENSG00000152061|Q5R372-2|RABGAP1L	nc|ENSG00000152061|Q5R372-2|RABGAP1L	nc|ENSG00000152061|Q5R372-2|RABGAP1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.332763671875	2	553.334424	1104.6543	0.81959	0.00045351	-4.4582	-0.0024669	-3.6386	-0.0020134	553.3317918445606	96.793	1.7474	96.956	96.403	98.15	0.16317					118	40	4	0	0	0	0.78983	1	9950	9950		27.882	3.6795	1	2701500			18687	14993	12576	12585	21636	21636					0.10615462062582992
IRLGLKRMQH	10	Unmodified	_IRLGLKRMQH_					0	0	0			REV__chr10:21370115-21372776|44|32.5|0.01|11.55|-|0|LINC02643,None|2	REV__chr10:21370115-21372776|44|32.5|0.01|11.55|-|0|LINC02643,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.878662109375	2	626.376966	1250.73938	0.00090703	5.6814E-07	1.0516	0.00065869	1.0525	0.00065926	626.8794591165652	54.226	0.55487	54.177	53.736	54.291	-0.049271					23	14	2	0	0	0	0.86218	1	4443	4443		32.812	0	1	123270	+		18688	15470	12577	12586	21637	21637					0.1240392904737746
IRLGLKRMQH	10	Unmodified	_IRLGLKRMQH_					0	0	0			REV__chr10:21370115-21372776|44|32.5|0.01|11.55|-|0|LINC02643,None|2	REV__chr10:21370115-21372776|44|32.5|0.01|11.55|-|0|LINC02643,None|2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	626.376966	1250.73938	-0.10778	-6.751E-05	1.0806	0.00067684	0.97278	0.00060933	626.377224107054	53.901	0.89811	53.923	53.539	54.438	0.022537	-0.12679	1.8827E-05	NaN	32.812	33	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37779	+		18689	15470	12577	12586							0.1240392904737746
IRLGLKRMQH	10	Unmodified	_IRLGLKRMQH_					0	0	0			REV__chr10:21370115-21372776|44|32.5|0.01|11.55|-|0|LINC02643,None|2	REV__chr10:21370115-21372776|44|32.5|0.01|11.55|-|0|LINC02643,None|2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	626.376966	1250.73938	0.00090703	5.6814E-07	1.0516	0.00065869	1.0525	0.00065926	626.8794591165652	54.226	0.55487	54.177	53.736	54.291	-0.049271	0.12679	-1.7465E-05	NaN	32.812	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123270	+		18690	15470	12577	12586							0.1240392904737746
IRLGPAPLPLP	11	Unmodified	_IRLGPAPLPLP_					0	0	0		ENST00000344204.8_1_5:14509145-14509322:+|nuORF	ENST00000344204.8_1_5:14509145-14509322:+|nuORF	ENST00000344204.8_1_5:14509145-14509322:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.36572265625	2	572.366059	1142.71756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.301	1	23.354	22.854	23.854	0.05291								0	0	0	0.56276	1	735	735		23.042	3.0457	1				18691	10290	12578	12587	21638	21638					0.15191447570464334
IRLKKTEA	8	Unmodified	_IRLKKTEA_					0	0	0			REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.77679443359375	2	479.805834	957.597115	-0.60256	-0.00028911	-0.27164	-0.00013034	-0.8742	-0.00041945	479.80490201965756	19.302	0.26561	18.672	18.49	18.756	-0.62961					9	5	2	0	0	0	0.4196	1	498	498		31.955	30.336	1	34483	+		18692	16375	12579	12588	21639	21639					0.11662039576845018
IRLLAKVG	8	Unmodified	_IRLLAKVG_					0	0	0			REV__nc|ENSG00000129657|Q92503-3|SEC14L1	REV__nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001708984375	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.82419	1	8101	8101		13.775	0	1	6323600	+		18693	18828	12580	12589	21640	21640					0.14627262273359065
IRLLFNELGIR	11	Unmodified	_IRLLFNELGIR_					0	0	0			REV__ENST00000473417.5_1_3:125188296-125239016:-|nuORF	REV__ENST00000473417.5_1_3:125188296-125239016:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.6092529296875	3	448.610111	1342.8085	-0.14494	-6.5021E-05	-1.758	-0.00078864	-1.9029	-0.00085366	448.9437169224278	77.071	0.84238	77.124	76.655	77.498	0.052704					75	41	2	0	0	0	0.76579	1	7466	7466		18.531	0.69791	1	780830	+		18694	18051	12581	12590	21641	21641					0.15081291547903675
IRLLFNELGIR	11	Unmodified	_IRLLFNELGIR_					0	0	0			REV__ENST00000473417.5_1_3:125188296-125239016:-|nuORF	REV__ENST00000473417.5_1_3:125188296-125239016:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.6094970703125	3	448.610111	1342.8085	-1.3124	-0.00058875	-0.37673	-0.000169	-1.6891	-0.00075776	448.6097327049683	74.956	1.1468	75.082	74.623	75.77	0.12545					89	30	4	0	0	0	0.79224	1	6947	6947		12.957	0	1	427440	+		18695	18051	12581	12590	21642	21642					0.15081291547903675
IRLRHLKENM	10	Unmodified	_IRLRHLKENM_					0	0	0			REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2563781738281	3	437.255563	1308.74486	2.1229	0.00092824	1.8343	0.00080206	3.9572	0.0017303	437.2563089738452	99.067	2.7047	99.115	98.232	100.94	0.048157					189	62	4	0	0	0	0.86409	1	10673	10673		25.126	0.89417	1	798600	+		18696	20201	12582	12591	21643	21643					0.10283607839210163
IRLRHLKENM	10	Unmodified	_IRLRHLKENM_					0	0	0			REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2570495605469	3	437.255563	1308.74486	0.72446	0.00031677	3.3633	0.0014706	4.0878	0.0017874	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.86409	1	10427	10427		25.126	2.5463	1	670840	+		18697	20201	12582	12591	21644	21644					0.10283607839210163
IRLRHLKENM	10	Unmodified	_IRLRHLKENM_					0	0	0			REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2559814453125	3	437.255563	1308.74486	1.2902	0.00056413	2.8955	0.0012661	4.1856	0.0018302	437.2568346681843	98.713	2.2467	99.074	98.073	100.32	0.36136					142	55	3	0	0	0	0.86207	1	11906	11906		24.232	0	1	470200	+		18698	20201	12582	12591	21645	21645					0.10283607839210163
IRLRLNAARA	10	Unmodified	_IRLRLNAARA_					0	0	0			REV__ENST00000548421.2_1_14:105722813-105767174:-|nuORF	REV__ENST00000548421.2_1_14:105722813-105767174:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3662109375	2	577.367456	1152.72036	0.64818	0.00037424	-2.4151	-0.0013944	-1.7669	-0.0010202	577.3659582171192	102.04	3.0704	102.23	101.84	104.91	0.19484					206	76	5	0	0	0	0.86718	1	10765	10765		27.882	1.0861	1	17266000	+		18699	28570	12583	12592	21646	21646					0.1501071574798516
IRLTMEQEW	9	Unmodified	_IRLTMEQEW_					0	0	0			REV__ENST00000490770.5_1_1:155110767-155110920:+|nuORF	REV__ENST00000490770.5_1_1:155110767-155110920:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	603.3002319335938	2	603.302798	1204.59104	-0.2488	-0.0001501	-4.43	-0.0026726	-4.6788	-0.0028227	603.2997326697555	31.82	0.89029	31.831	31.157	32.048	0.0109					24	20	2	0	0	0	0.76764	1	1744	1744		34.173	5.0025	1	52226	+		18700	27643	12584	12593	21647	21647					-0.003068467169896394
IRLTMEQEW	9	Unmodified	_IRLTMEQEW_					0	0	0			REV__ENST00000490770.5_1_1:155110767-155110920:+|nuORF	REV__ENST00000490770.5_1_1:155110767-155110920:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	603.302798	1204.59104	-1.0312	-0.00062215	-3.6307	-0.0021904	-4.6619	-0.0028125	603.3005093089952	31.841	1.0497	31.835	31.271	32.32	-0.0061455	-0.022903	0.00049689	NaN	34.173	36	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46679	+		18701	27643	12584	12593							-0.003068467169896394
IRLTQYMD	8	Unmodified	_IRLTQYMD_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8182983398438	2	520.265684	1038.51682	-0.50604	-0.00026328	-3.2522	-0.001692	-3.7582	-0.0019553	520.2637264668335	85.964	1.1077	86.412	85.863	86.971	0.44736					42	26	2	0	0	0	0.4196	1	10111	10111		51.335	3.4199	1	128700			18702	4763	12585	12594	21648	21648					-0.0009018980849759828
IRLYQKDFLRI	11	Unmodified	_IRLYQKDFLRI_					0	0	0		ENSG00000139926|ENST00000344768|FRMD6;nc|ENSG00000139926|Q96NE9-2|FRMD6;nc|ENSG00000139926|Q96NE9-3|FRMD6	ENSG00000139926|ENST00000344768|FRMD6	ENSG00000139926|ENST00000344768|FRMD6	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	488.958984375	3	488.961033	1463.86127	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.741	1	16.662	16.162	17.162	-0.079056								0	0	0	0.56276	1	145	145		12.957	3.7457	1				18703	4402	12586	12595	21649	21649					0.14789249610748811
IRLYRQLHSG	10	Unmodified	_IRLYRQLHSG_					0	0	0			REV__ENSG00000109182|ENST00000226432|CWH43	REV__ENSG00000109182|ENST00000226432|CWH43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.8558959960938	2	621.856921	1241.69929	-0.065905	-4.0984E-05	-1.6028	-0.00099673	-1.6687	-0.0010377	621.8555367846633	31.542	0.49365	31.536	31.271	31.764	-0.0061474					16	11	2	0	0	0	0.8651	1	1731	1731		25.574	3.8883	1	33767	+		18704	17751	12587	12596	21650	21650					0.08810705648443218
IRLYRTLLPP	10	Unmodified	_IRLYRTLLPP_					0	0	0			REV__ENSG00000185010|ENST00000360256|F8	REV__ENSG00000185010|ENST00000360256|F8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3928833007812	2	621.390065	1240.76558	-0.078753	-4.8936E-05	4.3785	0.0027208	4.2997	0.0026718	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.74274	4	10821	10809;10821;10845;10857		42.396	1.4457	1	10411000	+		18705	22726	12588	12597	21651;21652;21653;21654	21652					0.1548252149052587
IRLYRTLLPP	10	Unmodified	_IRLYRTLLPP_					0	0	0			REV__ENSG00000185010|ENST00000360256|F8	REV__ENSG00000185010|ENST00000360256|F8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3927612304688	2	621.390065	1240.76558	2.9766	0.0018496	1.2761	0.00079293	4.2527	0.0026426	621.3907359645153	104.71	2.7313	104.66	104.1	106.83	-0.04039					247	64	5	0	0	0	0.74274	6	11565	11517;11529;11553;11565;11577;11652		42.396	8.2236	1	12926000	+		18706	22726	12588	12597	21655;21656;21657;21658;21659;21660	21658					0.1548252149052587
IRLYRTLLPP	10	Unmodified	_IRLYRTLLPP_					0	0	0			REV__ENSG00000185010|ENST00000360256|F8	REV__ENSG00000185010|ENST00000360256|F8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3929443359375	2	621.390065	1240.76558	1.3	0.00080781	2.97	0.0018456	4.2701	0.0026534	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.85934	3	11114	11114;11126;11138		35.618	4.8398	1	23079000	+		18707	22726	12588	12597	21661;21662;21663	21661					0.1548252149052587
IRLYRTLLPP	10	Unmodified	_IRLYRTLLPP_					0	0	0			REV__ENSG00000185010|ENST00000360256|F8	REV__ENSG00000185010|ENST00000360256|F8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3927001953125	2	621.390065	1240.76558	0.9213	0.00057249	3.1806	0.0019764	4.1019	0.0025489	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.77314	3	11177	11045;11165;11177		40.778	14.085	1	22352000	+		18708	22726	12588	12597	21664;21665;21666	21666					0.1548252149052587
IRMMSMTT	8	Unmodified	_IRMMSMTT_					0	0	0		ENST00000378470.5_2_10:14561962-14562064:-|nuORF	ENST00000378470.5_2_10:14561962-14562064:-|nuORF	ENST00000378470.5_2_10:14561962-14562064:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.2874755859375	2	485.729566	969.444579	-0.62339	-0.0003028	1.2295	0.00059719	0.60607	0.00029439	485.72980211840104	72.062	0.45367	72.021	71.77	72.223	-0.04039					25	16	2	0	0	0	0.4196	1	6999	6999		30.504	0	1	55801			18709	10866	12589	12598	21667	21667					-0.04136563478084554
IRNALIKHLIK	11	Unmodified	_IRNALIKHLIK_					0	0	0			REV__L1PA7_dup10097|chr11:121781424-121785258:-|1.4322006190095613|0.0265596336256901|5.75|58.0|57|2|sense	REV__L1PA7_dup10097|chr11:121781424-121785258:-|1.4322006190095613|0.0265596336256901|5.75|58.0|57|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.6269836425781	3	440.294235	1317.86087	0.12493	5.5008E-05	-4.4297	-0.0019504	-4.3048	-0.0018954	440.29209490830686	59.759	1.3614	59.791	59.261	60.623	0.032825					81	34	3	0	0	0	0.7896	1	5529	5529		13.508	1.0751	1	212730	+		18710	29584	12590	12599	21668	21668					0.21465874681553032
IRNGDKLK	8	Unmodified	_IRNGDKLK_					0	0	0			REV__ENSG00000006432|ENST00000554752|MAP3K9	REV__ENSG00000006432|ENST00000554752|MAP3K9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.287109375	2	472.287808	942.561064	2.1484	0.0010146	-2.0454	-0.000966	0.103	4.8644E-05	472.28673091824714	113.99	1.2395	114.01	113.14	114.38	0.020027					83	56	2	0	0	0	0.86288	1	13792	13792		26.796	0	1	98727	+		18711	16101	12591	12600	21669	21669					0.0874858239999412
IRNPIVTGY	9	Unmodified	_IRNPIVTGY_					0	0	0			REV__ENSG00000152430|ENST00000392296|BOLL	REV__ENSG00000152430|ENST00000392296|BOLL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7940063476562	2	516.795466	1031.57638	-0.83709	-0.0004326	-3.0347	-0.0015683	-3.8718	-0.0020009	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.78058	1	8595	8595		30.504	4.9296	1	490270	+		18712	20296	12592	12601	21670	21670					0.06185449197187154
IRNPIVTGY	9	Unmodified	_IRNPIVTGY_					0	0	0			REV__ENSG00000152430|ENST00000392296|BOLL	REV__ENSG00000152430|ENST00000392296|BOLL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7929077148438	2	516.795466	1031.57638	-1.5008	-0.00077558	-2.6662	-0.0013779	-4.167	-0.0021535	516.7939962444509	86.285	2.6644	86.444	84.762	87.426	0.15851					129	61	3	0	0	0	0.78983	1	8425	8425		27.882	1.1893	1	241060	+		18713	20296	12592	12601	21671	21671					0.06185449197187154
IRNPQRKT	8	Unmodified	_IRNPQRKT_					0	0	0		ENST00000375401.7_1_X:53245336-53246434:-|nuORF	ENST00000375401.7_1_X:53245336-53246434:-|nuORF	ENST00000375401.7_1_X:53245336-53246434:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8052673339844	2	506.804157	1011.59376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.371	1	36.653	36.153	37.153	0.28173								0	0	0	0.29703	1	2849	2849		37.159	2.9866	1				18714	10797	12593	12602	21672	21672					0.08842789522839212
IRPCLRLASA	10	Unmodified	_IRPCLRLASA_					0	0	0			REV__ENST00000196371.9_1_5:41862769-41870602:-|nuORF	REV__ENST00000196371.9_1_5:41862769-41870602:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.3270263671875	2	550.323868	1098.63318	3.188	0.0017544	2.9044	0.0015983	6.0923	0.0033527	550.325464553472	100.2	1.1012	100.15	99.651	100.75	-0.052353					65	24	3	0	0	0	0.85466	1	10848	10848		20.947	0	1	374270	+		18715	24090	12594	12603	21673	21673					0.08781173482043414
IRPEGKNN	8	Unmodified	_IRPEGKNN_					0	0	0		ENST00000477870.5_1_20:39796371-39799023:+|nuORF;nc|ENSG00000124181|P19174|PLCG1;ENSG00000124181|ENST00000685551|PLCG1	ENST00000477870.5_1_20:39796371-39799023:+|nuORF	ENST00000477870.5_1_20:39796371-39799023:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.253662109375	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.89494	1	8014	8014		37.159	0	1	1324500			18716	3312	12595	12604	21674	21674					0.027191324691784757
IRPGKNSK	8	Unmodified	_IRPGKNSK_					0	0	0		ENSG00000197943|ENST00000564138|PLCG2;ENST00000567980.5_1_16:81819579-81955027:+|nuORF	ENSG00000197943|ENST00000564138|PLCG2	ENSG00000197943|ENST00000564138|PLCG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2746276855469	2	450.274701	898.534849	0.59861	0.00026954	-0.17405	-7.8372E-05	0.42456	0.00019117	450.27444477796837	83.377	0.92702	83.311	82.97	83.897	-0.066185					42	21	3	0	0	0	0.87792	1	8492	8492		31.53	3.2755	1	255680			18717	8216	12596	12605	21675	21675					0.08152313228515595
IRPGLSEAVLQ	11	Unmodified	_IRPGLSEAVLQ_					0	0	0		ENST00000466828.5_1_10:105642444-105658073:-|nuORF;ENSG00000107960|ENST00000224950|STN1	ENST00000466828.5_1_10:105642444-105658073:-|nuORF	ENST00000466828.5_1_10:105642444-105658073:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8612670898438	2	591.845687	1181.67682	0.18583	0.00010998	-3.6368	-0.0021524	-3.451	-0.0020425	591.8431261491098	16.063	0.12304	15.576	15.484	15.607	-0.48718					4	2	2	0	0	0	0.17811	1	78	78		14.694	0	1	44428			18718	2384	12597	12606	21676	21676					0.0932506146018568
IRPIPKKE	8	Unmodified	_IRPIPKKE_					0	0	0			REV__ENSG00000138336|ENST00000373644|TET1	REV__ENSG00000138336|ENST00000373644|TET1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.815185546875	2	490.816202	979.617851	-0.95094	-0.00046674	-0.52084	-0.00025564	-1.4718	-0.00072237	490.8158025749221	74.022	0.86785	74.411	74.042	74.91	0.38921					46	20	3	0	0	0	0.884	1	8327	8327		33.516	1.5607	1	603920	+		18719	19458	12598	12607	21677	21677					0.127226299565109
IRPKPNGN	8	Unmodified	_IRPKPNGN_					0	0	0			REV__nc|ENSG00000091129|Q92823-5|NRCAM	REV__nc|ENSG00000091129|Q92823-5|NRCAM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.2589416503906	2	448.259051	894.503549	-1.1817	-0.00052971	1.3199	0.00059164	0.13817	6.1935E-05	448.2595721042995	87.603	2.3529	87.603	87.119	89.472	0					76	54	2	0	0	0	0.85277	1	8397	8397		25.45	0	1	222300	+		18720	29726	12599	12608	21678	21678					0.05207740194418875
IRPKTHTHTG	10	Unmodified	_IRPKTHTHTG_					0	0	0		ENST00000315762.5_9:67793260-67793749:+|nuORF	ENST00000315762.5_9:67793260-67793749:+|nuORF	ENST00000315762.5_9:67793260-67793749:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3191528320312	2	574.320171	1146.62579	-1.0331	-0.00059332	-0.2741	-0.00015742	-1.3072	-0.00075074	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.86471	1	9873	9873		30.318	0	1	1380900			18721	9982	12600	12609	21679	21679					0.05834157205958945
IRPKTHTHTG	10	Unmodified	_IRPKTHTHTG_					0	0	0		ENST00000315762.5_9:67793260-67793749:+|nuORF	ENST00000315762.5_9:67793260-67793749:+|nuORF	ENST00000315762.5_9:67793260-67793749:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3189697265625	2	574.320171	1146.62579	2.1223	0.0012189	-3.3781	-0.0019401	-1.2558	-0.00072123	574.3181422905453	94.479	4.1031	94.419	93.372	97.475	-0.059204					230	96	5	0	0	0	0.82886	1	10061	10061		37.812	4.9991	1	1734300			18722	9982	12600	12609	21680	21680					0.05834157205958945
IRPLPPPATT	10	Unmodified	_IRPLPPPATT_					0	0	0			REV__ENSG00000146278.11,PNRC1,chr6,+,I1.1,89081435,89081835|12|11.62|2|intron	REV__ENSG00000146278.11,PNRC1,chr6,+,I1.1,89081435,89081835|12|11.62|2|intron	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.817138671875	2	531.818941	1061.62333	0.49482	0.00026316	-4.4068	-0.0023436	-3.912	-0.0020805	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.6116	1	10204	10204		49.442	3.4693	1	1227700	+		18723	20003	12601	12610	21681	21681					0.09498308748311501
IRPLPTKKQM	10	Unmodified	_IRPLPTKKQM_					0	0	0		ENSG00000122299|ENST00000355758|ZC3H7A	ENSG00000122299|ENST00000355758|ZC3H7A	ENSG00000122299|ENST00000355758|ZC3H7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	606.3699340820312	2	606.368275	1210.722	1.0648	0.00064567	0.92935	0.00056353	1.9942	0.0012092	606.3686977940384	94.008	3.2437	94.236	93.32	96.564	0.22863					196	77	3	0	0	0	0.8651	1	9601	9601		25.574	3.8883	1	863300			18724	3218	12602	12611	21682	21682					0.12506588721726075
IRPTWEWYRQQ	11	Unmodified	_IRPTWEWYRQQ_					0	0	0			REV__ENST00000314117.8_1_4:37650968-37687967:-|nuORF	REV__ENST00000314117.8_1_4:37650968-37687967:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.8056640625	3	521.600275	1561.779	-0.10278	-5.3609E-05	-2.8188	-0.0014703	-2.9216	-0.0015239	521.5990659303874	44.562	0.31859	45.025	44.906	45.224	0.46313					12	7	3	0	0	0	0.17863	1	4115	4115		14.086	0	1	194600	+		18725	24932	12603	12612	21683	21683					0.020577275317918975
IRPVEKIYTY	10	Unmodified	_IRPVEKIYTY_					0	0	0		ENST00000474273.5_1_2:170666844-170666901:+|nuORF	ENST00000474273.5_1_2:170666844-170666901:+|nuORF	ENST00000474273.5_1_2:170666844-170666901:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.3842163085938	2	641.363713	1280.71287	0.9402	0.00060301	3.426	0.0021973	4.3662	0.0028003	641.3651040552808	102.79	0.12563	102.91	102.81	102.93	0.12622					4	2	2	0	0	0	0.37624	1	10829	10829		62.107	30.473	1	74569			18726	12302	12604	12613	21684	21684					0.08374518637060646
IRQHETLRSVQ	11	Unmodified	_IRQHETLRSVQ_					0	0	0			REV__nc|ENSG00000099326|P28698-2|MZF1	REV__nc|ENSG00000099326|P28698-2|MZF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3012390136719	3	456.256508	1365.7477	0.15306	6.9834E-05	-0.50594	-0.00023084	-0.35288	-0.000161	456.5896829398617	33.447	0.12263	33.557	33.505	33.628	0.10991					5	3	2	0	0	0	0.17784	1	1632	1632		12.433	0	1	28078	+		18727	17090	12605	12614	21685	21685					0.07945154497679141
IRQRRKRLVVP	11	Unmodified	_IRQRRKRLVVP_					0	0	0			REV__ENSG00000138246|ENST00000260818|DNAJC13	REV__ENSG00000138246|ENST00000260818|DNAJC13	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	473.8056335449219	3	474.316033	1419.92627	0.05624	2.6675E-05	1.7951	0.00085146	1.8514	0.00087814	474.31691894319925	18.888	0.9426	18.954	18.483	19.426	0.066298					70	47	2	0	0	0	0.18216	1	340	340		9.6461	3.3253	1	275230	+		18728	19452	12606	12615	21686	21686					0.23310288927223155
IRRETETTFS	10	Unmodified	_IRRETETTFS_					0	0	0		nc|ENSG00000158458|O14511-7|NRG2;nc|ENSG00000158458|O14511-8|NRG2;nc|ENSG00000158458|O14511-2|NRG2;ENSG00000158458|ENST00000361474|NRG2;nc|ENSG00000158458|O14511-4|NRG2;nc|ENSG00000158458|O14511-3|NRG2	nc|ENSG00000158458|O14511-7|NRG2	nc|ENSG00000158458|O14511-7|NRG2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	620.3211669921875	2	620.320034	1238.62551	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.254	1	54.335	53.835	54.835	0.081524								0	0	0	0.45132	1	4478	4478		24.519	0	1				18729	5478	12607	12616	21687	21687					0.015746926954761875
IRRGKRAV	8	Unmodified	_IRRGKRAV_					0	0	0			REV__ENST00000421304.5_3_7:73098145-73100977:+|nuORF	REV__ENST00000421304.5_3_7:73098145-73100977:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.3153991699219	2	478.317235	954.619916	-2.5669	-0.0012278	-3.8706	-0.0018514	-6.4375	-0.0030791	478.3152259458775	37.335	1.6446	37.346	36.48	38.125	0.011173					62	36	2	0	0	0	0.81724	1	2428	2428		14.664	0	1	87060	+		18730	26496	12608	12617	21688	21688					0.14079103484971256
IRRHHVRLTYQ	11	Unmodified	_IRRHHVRLTYQ_					0	0	0		ENSG00000178163|ENST00000326756|ZNF518B	ENSG00000178163|ENST00000326756|ZNF518B	ENSG00000178163|ENST00000326756|ZNF518B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.9541931152344	3	493.619892	1477.83785	-1.8007	-0.00088885	4.0862	0.002017	2.2855	0.0011282	493.6218802691259	31.167	0.9176	31.167	30.72	31.638	0					75	31	3	0	0	0	0.78683	1	1444	1444		14.086	0.57807	1	50794			18731	7188	12609	12618	21689	21689					0.11804248616795121
IRRIFEITTQF	11	Unmodified	_IRRIFEITTQF_					0	0	0		ENSG00000198785|ENST00000361820|GRIN3A	ENSG00000198785|ENST00000361820|GRIN3A	ENSG00000198785|ENST00000361820|GRIN3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	475.6087951660156	3	475.273388	1422.79833	-0.66012	-0.00031374	2.8279	0.001344	2.1678	0.0010303	475.27507367632586	51.473	1.3613	51.45	50.834	52.195	-0.02343					71	35	4	0	0	0	0.74771	1	4529	4529		22.562	0.78116	1	171660			18732	8331	12610	12619	21690	21690					0.10384683822690022
IRRKGKLRLR	10	Unmodified	_IRRKGKLRLR_					0	0	0		ENST00000216487.11_1_14:93154795-93154999:+|nuORF	ENST00000216487.11_1_14:93154795-93154999:+|nuORF	ENST00000216487.11_1_14:93154795-93154999:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3922729492188	2	648.446572	1294.87859	0.94455	0.00061249	-0.75379	-0.00048879	0.19077	0.0001237	648.4458311570781	106.86	0.26127	106.95	106.73	106.99	0.091255					6	5	2	0	0	0	0.37624	1	11428	11428		23.042	6.5693	1	38449			18733	9142	12611	12620	21691	21691					0.2429463472703901
IRRKIVKP	8	Unmodified	_IRRKIVKP_					0	0	0		ENST00000531849.5_1_11:74554845-74617298:-|nuORF;nc|ENSG00000166435|Q6P2D8-5|XRRA1;nc|ENSG00000166435|Q6P2D8-2|XRRA1;nc|ENSG00000166435|Q6P2D8-4|XRRA1;nc|ENSG00000166435|Q6P2D8-3|XRRA1;nc|ENSG00000166435|Q6P2D8|XRRA1;ENSG00000166435|ENST00000684022|XRRA1;ENST00000529926.1_1_11:74562081-74617298:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.35394287109375	2	505.353286	1008.69202	-0.37073	-0.00018735	0.74357	0.00037576	0.37284	0.00018842	505.3536071882487	52.529	1.4494	52.953	52.638	54.087	0.42348					41	22	2	0	0	0	0.79929	1	5258	5258		18.324	0.95945	1	727160			18734	6195	12612	12621	21692	21692					0.18802017838686425
IRRKPLFYT	9	Unmodified	_IRRKPLFYT_					0	0	0		ENSG00000160716|ENST00000368476|CHRNB2	ENSG00000160716|ENST00000368476|CHRNB2	ENSG00000160716|ENST00000368476|CHRNB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.3585815429688	2	597.361308	1192.70806	-0.56757	-0.00033904	-4.3826	-0.002618	-4.9502	-0.0029571	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.72402	1	10682	10682		38.806	6.0556	1	3951300			18735	5601	12613	12622	21693	21693					0.11941679284927886
IRRKPLFYT	9	Unmodified	_IRRKPLFYT_					0	0	0		ENSG00000160716|ENST00000368476|CHRNB2	ENSG00000160716|ENST00000368476|CHRNB2	ENSG00000160716|ENST00000368476|CHRNB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.3587646484375	2	597.361308	1192.70806	-1.2979	-0.00077532	-4.1559	-0.0024826	-5.4539	-0.0032579	597.3583970456502	100.18	2.7493	100.35	98.666	101.42	0.17199					156	64	4	0	0	0	0.78058	1	10410	10410		30.504	5.3777	1	2737400			18736	5601	12613	12622	21694	21694					0.11941679284927886
IRRLHKVLRPF	11	Unmodified	_IRRLHKVLRPF_					0	0	0		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.6644287109375	3	478.977129	1433.90956	-0.95554	-0.00045768	-3.0917	-0.0014808	-4.0472	-0.0019385	479.310059055833	70.861	0.44971	71.409	71.166	71.615	0.54756					15	10	2	0	0	0	0.1767	1	7925	7925		24.232	5.7008	1	128000			18737	1442;3511	12614	12623	21695	21695					0.20995788041295782
IRRLHKVLRPF	11	Unmodified	_IRRLHKVLRPF_					0	0	0		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	478.977129	1433.90956	-0.099783	-4.7794E-05	-5.6214	-0.0026925	-5.7212	-0.0027403	479.3084332013002	71.534	0.34848	71.568	71.37	71.718	0.034004	0.06208	-0.0018405	NaN	24.232	16	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49430			18738	1442;3511	12614	12623							0.20995788041295782
IRRLHKVLRPF	11	Unmodified	_IRRLHKVLRPF_					0	0	0		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	478.977129	1433.90956	-1.5558	-0.00074519	-4.8167	-0.0023071	-6.3725	-0.0030523	478.9751706752032	71.562	0.45776	71.602	71.521	71.979	0.040222	0.095864	-0.00068414	NaN	24.232	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51158			18739	1442;3511	12614	12623							0.20995788041295782
IRRLHKVLRPF	11	Unmodified	_IRRLHKVLRPF_					0	0	0		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	478.977129	1433.90956	0.51877	0.00024848	-5.7671	-0.0027623	-5.2483	-0.0025138	479.30881892588155	71.541	0.15386	71.672	71.591	71.745	0.1301	0.16563	-0.0020498	NaN	24.232	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39622			18740	1442;3511	12614	12623							0.20995788041295782
IRRLHKVLRPF	11	Unmodified	_IRRLHKVLRPF_					0	0	0		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	478.977129	1433.90956	-1.0869	-0.00052059	-4.162	-0.0019935	-5.2489	-0.0025141	478.9751128026527	71.203	0.3047	71.279	71.108	71.412	0.076225	-0.22665	0.00025658	NaN	24.232	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55903			18741	1442;3511	12614	12623							0.20995788041295782
IRRPLWVHGVK	11	Unmodified	_IRRPLWVHGVK_					0	0	0		ENST00000355451.7_1_7:44424710-44424929:-|nuORF	ENST00000355451.7_1_7:44424710-44424929:-|nuORF	ENST00000355451.7_1_7:44424710-44424929:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	454.6175842285156	3	454.282329	1359.82516	-2.0728	-0.00094166	-1.1577	-0.00052591	-3.2305	-0.0014676	454.28190906075935	26.626	0.68375	26.626	26.315	26.999	0					46	30	2	0	0	0	0.78683	1	1013	1013		14.086	1.1285	1	52908			18742	10352	12615	12624	21696	21696					0.15963837224535382
IRRQKREWIKF	11	Unmodified	_IRRQKREWIKF_					0	0	0		ENSG00000134760|ENST00000257192|DSG1	ENSG00000134760|ENST00000257192|DSG1	ENSG00000134760|ENST00000257192|DSG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	520.6507568359375	3	520.64756	1558.92085	-0.042901	-2.2336E-05	4.3328	0.0022559	4.2899	0.0022335	520.9841774153862	108.42	1.2085	108.38	108.01	109.22	-0.042404					82	50	2	0	0	0	0.88596	1	11870	11870		3.6191	0	1	1349000			18743	3955	12616	12625	21697	21697					0.1637456534476769
IRRTKLLVHV	10	Unmodified	_IRRTKLLVHV_					0	0	0			REV__ENST00000422095.1_3_7:92000906-92025787:+|nuORF	REV__ENST00000422095.1_3_7:92000906-92025787:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7652282714844	3	412.275063	1233.80336	-1.2149	-0.00050086	-4.4849	-0.001849	-5.6998	-0.0023499	412.27309356628615	40.533	0.87127	40.925	40.65	41.521	0.39209					31	24	2	0	0	0	0.37624	1	3521	3521		11.636	1.0491	1	445730	+		18744	16043	12617	12626	21698	21698					0.19581032475980464
IRRWLHFFKR	10	Unmodified	_IRRWLHFFKR_					0	0	0			REV__ENST00000370008.3_1_1:109351697-109351763:+|nuORF	REV__ENST00000370008.3_1_1:109351697-109351763:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.9586486816406	3	486.957957	1457.85204	2.7576	0.0013429	-0.66262	-0.00032267	2.095	0.0010202	486.95738864043653	102.42	1.0705	102.72	101.91	102.98	0.29865					48	24	3	0	0	0	0.91645	1	12506	12506		6.6596	0	1	296380	+		18745	25638	12618	12627	21699	21699					0.14142945835692444
IRSAYKRLS	9	Unmodified	_IRSAYKRLS_					0	0	0		nc|ENSG00000120549|Q5T5P2-3|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217	nc|ENSG00000120549|Q5T5P2-3|KIAA1217	nc|ENSG00000120549|Q5T5P2-3|KIAA1217	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3351440429688	2	547.327465	1092.64038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.05	1	114.05	113.55	114.55	0.0011978								0	0	0	0.32758	1	13760	13760		20.947	0.95016	1				18746	3136	12619	12628	21700	21700					0.0977622935411091
IRSELHKVF	9	Unmodified	_IRSELHKVF_					0	0	0		ENST00000367051.5_1_1:207812769-207813015:+|nuORF	ENST00000367051.5_1_1:207812769-207813015:+|nuORF	ENST00000367051.5_1_1:207812769-207813015:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	564.8313598632812	2	564.82984	1127.64513	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.521	1	66.647	66.147	67.147	0.12649								0	0	0	0.31828	1	5912	5912		24.203	1.1603	1				18747	10529	12620	12629	21701	21701					0.08641113496878461
IRSHTKLN	8	Unmodified	_IRSHTKLN_					0	0	0			REV__ENSG00000161940|ENST00000293805|BCL6B	REV__ENSG00000161940|ENST00000293805|BCL6B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.73809814453125	2	484.785433	967.556313	-1.1183	-0.00054214	2.383	0.0011552	1.2647	0.0006131	484.78750537708385	91.853	1.0226	92.315	91.765	92.788	0.46249					36	23	2	0	0	0	0.4196	1	10969	10969		32.812	0	1	153850	+		18748	20785	12621	12630	21702	21702					0.07123698257225897
IRSLSVKVF	9	Unmodified	_IRSLSVKVF_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8272094726562	2	524.829309	1047.64407	-0.59499	-0.00031227	-2.9841	-0.0015662	-3.5791	-0.0018784	524.8275943455435	102.47	0.70876	102.47	102.25	102.96	0					43	17	3	0	0	0	0.78536	1	10493	10493		29.15	0	1	339820	+		18749	19496	12622	12631	21703	21703					0.12214899127980061
IRSMEYLF	8	Unmodified	_IRSMEYLF_					0	0	0			REV__nc|ENSG00000146122|Q86T65-4|DAAM2	REV__nc|ENSG00000146122|Q86T65-4|DAAM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.7708740234375	2	529.770603	1057.52665	-0.78284	-0.00041473	1.1027	0.0005842	0.31991	0.00016948	529.7708561271895	67.269	0.86028	67.321	67.009	67.869	0.052376					76	31	4	0	0	0	0.79403	1	5986	5986		63.306	3.0123	1	630540	+		18750	19989	12623	12632	21704	21704					0.0001899819685604598
IRSSIGKYKR	10	Unmodified	_IRSSIGKYKR_					0	0	0			REV__nc|ENSG00000122591|Q9BYI3-3|HYCC1	REV__nc|ENSG00000122591|Q9BYI3-3|HYCC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3672485351562	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.8651	1	12609	12609		25.574	4.6271	1	3346600	+		18751	18505	12624	12633	21705	21705					0.12459876308253115
IRSTRLKVM	9	Oxidation (M)	_IRSTRLKVM(Oxidation (M))_		IRSTRLKVM(1)		IRSTRLKVM(44)	0	0	1			REV__chr6:55399441-55401790|17|34.88|0.03|10.21|+|1|GFRAL,GFRAL|1	REV__chr6:55399441-55401790|17|34.88|0.03|10.21|+|1|GFRAL,GFRAL|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3402709960938	2	560.336975	1118.6594	2.2618	0.0012674	3.5343	0.0019804	5.7961	0.0032478	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.64555	1	12439	12439		44.377	8.7589	1	14759000	+		18752	15884	12625	12634	21706	21706		225			0.10481442653508566
IRSTRLKVM	9	Oxidation (M)	_IRSTRLKVM(Oxidation (M))_		IRSTRLKVM(1)		IRSTRLKVM(44)	0	0	1			REV__chr6:55399441-55401790|17|34.88|0.03|10.21|+|1|GFRAL,GFRAL|1	REV__chr6:55399441-55401790|17|34.88|0.03|10.21|+|1|GFRAL,GFRAL|1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3419189453125	2	560.336975	1118.6594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.71	1	103.98	103.48	104.48	0.26524								0	0	0	0.32255	1	12659	12659		44.377	20.174	1		+		18753	15884	12625	12634	21707	21707		225			0.10481442653508566
IRTAVDGGR	9	Unmodified	_IRTAVDGGR_					0	0	0			REV__ENST00000409800.5_1_2:47135015-47143140:-|nuORF	REV__ENST00000409800.5_1_2:47135015-47143140:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7669982910156	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.7932	1	8714	8714		25.574	1.0549	1	547170	+		18754	26356	12626	12635	21708	21708					0.04590821360523023
IRTGQKTSK	9	Unmodified	_IRTGQKTSK_					0	0	0		ENST00000429687.7_1_14:20813096-20813561:+|nuORF;ENST00000527915.5_1_14:20813096-20813561:+|nuORF	ENST00000429687.7_1_14:20813096-20813561:+|nuORF	ENST00000429687.7_1_14:20813096-20813561:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.80364990234375	2	509.803823	1017.59309	-1.4574	-0.000743	1.1751	0.00059908	-0.2823	-0.00014392	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.71772	1	8188	8188		39.253	2.8061	1	920080			18755	11613	12627	12636	21709	21709					0.08499950083137264
IRTGVPNGN	9	Unmodified	_IRTGVPNGN_					0	0	0			REV__ENSG00000180992|ENST00000372014|MRPL14	REV__ENSG00000180992|ENST00000372014|MRPL14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2528991699219	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.78124	1	8033	8033		30.318	3.2704	1	1673200	+		18756	22431	12628	12637	21710	21710					0.027191324691784757
IRTIPLPKVLP	11	Unmodified	_IRTIPLPKVLP_					0	0	0			REV__ENST00000560735.5_1_15:49917364-49923047:+|nuORF	REV__ENST00000560735.5_1_15:49917364-49923047:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.9166870117188	2	623.915916	1245.81728	1.3365	0.00083387	-0.15632	-9.7533E-05	1.1802	0.00073634	623.9155943953253	109.95	0.81959	110.08	109.65	110.46	0.12289					62	32	3	0	0	0	0.80784	1	11823	11823		9.7057	3.393	1	2359700	+		18757	28768	12629	12638	21711	21711					0.2042026518442981
IRTISSCDPP	10	Unmodified	_IRTISSCDPP_					0	0	0			REV__ENST00000367204.5_1_1:204095493-204095874:+|nuORF	REV__ENST00000367204.5_1_1:204095493-204095874:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.8233032226562	2	544.773874	1087.53319	0.37278	0.00020308	-3.9125	-0.0021314	-3.5397	-0.0019283	545.2730793686668	51.583	0.70328	52.251	51.773	52.477	0.66729					26	16	2	0	0	0	0.37624	1	5098	5098		44.377	16.495	1	381790	+		18758	25559	12630	12639	21712	21712					-0.007071086424275563
IRTKKPSHIQ	10	Unmodified	_IRTKKPSHIQ_					0	0	0			REV__ENST00000545629.5_1_12:1086082-1099186:-|nuORF	REV__ENST00000545629.5_1_12:1086082-1099186:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3665161132812	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.86471	1	11429	11429		30.318	0	1	63350000	+		18759	28525	12631	12640	21713	21713					0.12459876308275852
IRTKKPSHIQ	10	Unmodified	_IRTKKPSHIQ_					0	0	0			REV__ENST00000545629.5_1_12:1086082-1099186:-|nuORF	REV__ENST00000545629.5_1_12:1086082-1099186:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3668823242188	2	604.367121	1206.71969	3.2045	0.0019367	-4.3338	-0.0026192	-1.1294	-0.00068255	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.86272	1	11848	11848		24.519	3.5723	1	63446000	+		18760	28525	12631	12640	21714	21714					0.12459876308275852
IRTKKPSHIQ	10	Unmodified	_IRTKKPSHIQ_					0	0	0			REV__ENST00000545629.5_1_12:1086082-1099186:-|nuORF	REV__ENST00000545629.5_1_12:1086082-1099186:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3663330078125	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.82886	1	11477	11477		37.812	7.4938	1	64334000	+		18761	28525	12631	12640	21715	21715					0.12459876308275852
IRTKKPSHIQ	10	Unmodified	_IRTKKPSHIQ_					0	0	0			REV__ENST00000545629.5_1_12:1086082-1099186:-|nuORF	REV__ENST00000545629.5_1_12:1086082-1099186:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3671875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.86047	1	12501	12501		23.523	0.94304	1	3346600	+		18762	28525	12631	12640	21716	21716					0.12459876308275852
IRTLTNRLGVV	11	Unmodified	_IRTLTNRLGVV_					0	0	0			REV__ENSG00000120820|ENST00000360814|GLT8D2	REV__ENSG00000120820|ENST00000360814|GLT8D2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.3926391601562	2	621.388054	1240.76155	4.2384	0.0026337	3.5756	0.0022219	7.814	0.0048555	621.3901654110842	104.31	1.8962	104.53	104.05	105.95	0.2268					124	45	4	0	0	0	0.73893	1	12758	12758		24.519	0.99649	1	1273000	+		18763	18433	12632	12641	21717	21717					0.15080431996761945
IRTPILNKRV	10	Unmodified	_IRTPILNKRV_					0	0	0			REV__chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|25	REV__chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|25	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9295959472656	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.585	1	47.497	46.997	47.997	-0.087646								0	0	0	0.45132	1	3569	3569		20.837	7.3292	1		+		18764	15844	12633	12642	21718	21718					0.17569039722025082
IRTPVRTG	8	Unmodified	_IRTPVRTG_					0	0	0			REV__ENST00000181839.8_1_7:39989863-39990283:+|nuORF	REV__ENST00000181839.8_1_7:39989863-39990283:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.274169921875	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.86677	1	9725	9725		27.882	2.4321	1	51698000	+		18765	24088	12634	12643	21719	21719					0.08152313228515595
IRTQKELSE	9	Unmodified	_IRTQKELSE_					0	0	0		ENSG00000129484|ENST00000429687|PARP2;nc|ENSG00000129484|Q9UGN5|PARP2	ENSG00000129484|ENST00000429687|PARP2	ENSG00000129484|ENST00000429687|PARP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3065185546875	2	552.306395	1102.59824	-0.70613	-0.00039	0.73262	0.00040463	0.026487	1.4629E-05	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.71772	1	9580	9580		39.253	0.44669	1	1609500			18766	3590	12635	12644	21720	21720					0.051042091551153135
IRTRREEGLNN	11	Unmodified	_IRTRREEGLNN_					0	0	0			REV__ENSG00000283205|ENST00000636536|unknown	REV__ENSG00000283205|ENST00000636536|unknown	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.248291015625	3	453.248013	1356.72221	0.79221	0.00035907	2.2255	0.0010087	3.0177	0.0013678	453.24893502220635	24.05	1.229	24.007	23.603	24.832	-0.043221					89	31	4	0	0	0	0.72374	1	831	831		27.644	0.59661	1	177000	+		18767	24053	12636	12645	21721	21721					0.05811679975295192
IRTSLEKKRR	10	Unmodified	_IRTSLEKKRR_					0	0	0		ENSG00000204624|ENST00000294484|DISP3;nc|ENSG00000204624|Q9P2K9-2|DISP3	ENSG00000204624|ENST00000294484|DISP3	ENSG00000204624|ENST00000294484|DISP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4058227539062	2	643.904402	1285.79425	1.6035	0.0010325	3.6709	0.0023637	5.2744	0.0033962	643.9065697286258	107.75	0.71651	107.89	107.28	107.99	0.13867					36	17	3	0	0	0	0.37624	1	11542	11542		44.377	16.296	1	2043500			18768	8470	12637	12646	21722	21722					0.16278639119650506
IRTVSLLRHQM	11	Unmodified	_IRTVSLLRHQM_					0	0	0		ENST00000256339.8_1_14:93799663-93799816:+|nuORF	ENST00000256339.8_1_14:93799663-93799816:+|nuORF	ENST00000256339.8_1_14:93799663-93799816:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.9329528808594	3	451.930968	1352.77107	2.1819	0.00098608	1.6411	0.00074167	3.823	0.0017277	451.9316131706083	100.36	1.9025	100.71	99.62	101.52	0.3459					138	47	4	0	0	0	0.73277	1	12189	12189		25.892	3.3301	1	885260			18769	9336	12638	12647	21723	21723					0.10879877010688688
IRVETPQPGGA	11	Unmodified	_IRVETPQPGGA_					0	0	0		nc|ENSG00000181588|Q86XN8-2|MEX3D	nc|ENSG00000181588|Q86XN8-2|MEX3D	nc|ENSG00000181588|Q86XN8-2|MEX3D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	562.8062133789062	2	562.806562	1123.59857	-0.21294	-0.00011985	0.036144	2.0342E-05	-0.1768	-9.9504E-05	562.8066839909809	34.199	0.53521	34.143	33.866	34.401	-0.056381					25	11	3	0	0	0	0.51007	1	2136	2136		51.193	15.574	1	57918			18770	15136	12639	12648	21724	21724					0.04171628874973976
IRVIAELQRVT	11	Unmodified	_IRVIAELQRVT_					0	0	0			REV__ENST00000493076.5_1_22:35806581-35817581:+|nuORF	REV__ENST00000493076.5_1_22:35806581-35817581:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	649.3994750976562	2	649.401161	1296.78777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.436	1	83.436	82.936	83.936	0								0	0	0	0.56276	1	7825	7825		11.636	1.3707	1		+		18771	17163	12640	12649	21725	21725					0.15124701168247157
IRVIQQSVRT	10	Unmodified	_IRVIQQSVRT_					0	0	0		nc|ENSG00000116584|Q92974-3|ARHGEF2;nc|ENSG00000116584|Q92974-2|ARHGEF2;ENSG00000116584|ENST00000361247|ARHGEF2;ENST00000474428.6_1_1:155922555-155932010:-|nuORF	nc|ENSG00000116584|Q92974-3|ARHGEF2	nc|ENSG00000116584|Q92974-3|ARHGEF2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.5805358886719	3	400.578811	1198.7146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.88	1	117.8	117.3	118.3	-0.07531								0	0	0	0.45132	1	12650	12650		20.837	1.5745	1				18772	2928	12641	12650	21726	21726					0.12319572445630911
IRVNPVIALE	10	Unmodified	_IRVNPVIALE_					0	0	0			REV__ENSG00000121716|ENST00000609309|PILRB	REV__ENSG00000121716|ENST00000609309|PILRB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	562.3430786132812	2	562.345323	1122.67609	0.77292	0.00043465	-3.8043	-0.0021393	-3.0314	-0.0017047	562.3430494101636	90.476	3.0468	90.629	89.657	92.704	0.15388					171	72	3	0	0	0	0.82886	1	9023	9023		37.812	8.6415	1	591570	+		18773	18463	12642	12651	21727	21727					0.11966266811100468
IRWIQLGP	8	Unmodified	_IRWIQLGP_					0	0	0			REV__ENSG00000127831|ENST00000248444|VIL1	REV__ENSG00000127831|ENST00000248444|VIL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79620361328125	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.86288	1	4234	4234		26.796	0.10319	1	1240000	+		18774	18747	12643	12652	21728	21728					0.08446074267988024
IRWLIPGQ	8	Unmodified	_IRWLIPGQ_					0	0	0		nc|ENSG00000113621|Q96J42-2|TXNDC15;ENSG00000113621|ENST00000358387|TXNDC15	nc|ENSG00000113621|Q96J42-2|TXNDC15	nc|ENSG00000113621|Q96J42-2|TXNDC15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79620361328125	2	491.795269	981.575986	-0.0088364	-4.3457E-06	1.0535	0.0005181	1.0447	0.00051376	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.80706	1	4758	4758		19.36	1.0356	1	782460			18775	2734	12644	12653	21729	21729					0.08446074267988024
IRYHKRHKKLR	11	Unmodified	_IRYHKRHKKLR_					0	0	0			REV__ENST00000490931.1_1_1:11171595-11175545:-|nuORF	REV__ENST00000490931.1_1_1:11171595-11175545:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.3248901367188	3	512.323299	1533.94807	0.093445	4.7874E-05	4.3004	0.0022032	4.3938	0.0022511	512.3254646131551	16.928	0.34835	16.988	16.814	17.163	0.060606					31	13	3	0	0	0	0.80813	2	218	205;218		9.6461	5.8031	1	200960	+		18776	27645	12645	12654	21730;21731	21731					0.2024509367581686
IRYHKRHKKLR	11	Unmodified	_IRYHKRHKKLR_					0	0	0			REV__ENST00000490931.1_1_1:11171595-11175545:-|nuORF	REV__ENST00000490931.1_1_1:11171595-11175545:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.326416015625	3	512.323299	1533.94807	0.81057	0.00041528	3.8327	0.0019636	4.6433	0.0023789	512.3250543907768	17.022	0.2883	16.998	16.847	17.136	-0.024035					24	11	3	0	0	0	0.85439	1	200	200		5.6988	2.0797	1	270910	+		18777	27645	12645	12654	21732	21732					0.2024509367581686
IRYHKRHKKLR	11	Unmodified	_IRYHKRHKKLR_					0	0	0			REV__ENST00000490931.1_1_1:11171595-11175545:-|nuORF	REV__ENST00000490931.1_1_1:11171595-11175545:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	512.323299	1533.94807	0.81057	0.00041528	3.8327	0.0019636	4.6433	0.0023789	512.3250543907768	17.022	0.2883	16.998	16.847	17.136	-0.024035	-0.063872	-0.00046232	NaN	9.6461	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	270910	+		18778	27645	12645	12654							0.2024509367581686
IRYHKRHKKLR	11	Unmodified	_IRYHKRHKKLR_					0	0	0			REV__ENST00000490931.1_1_1:11171595-11175545:-|nuORF	REV__ENST00000490931.1_1_1:11171595-11175545:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	512.323299	1533.94807	0.78461	0.00040198	3.9014	0.0019988	4.686	0.0024007	512.325150998041	17.59	0.33389	17.108	16.898	17.232	-0.48256	0.045742	-0.00035684	NaN	9.6461	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27462	+		18779	27645	12645	12654							0.2024509367581686
IRYHKRHKKLR	11	Unmodified	_IRYHKRHKKLR_					0	0	0			REV__ENST00000490931.1_1_1:11171595-11175545:-|nuORF	REV__ENST00000490931.1_1_1:11171595-11175545:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	512.323299	1533.94807	0.66691	0.00034167	3.4563	0.0017707	4.1232	0.0021124	512.3250579927284	17.791	0.24261	17.169	17.023	17.265	-0.62141	0.10764	-0.0010409	NaN	9.6461	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50360	+		18780	27645	12645	12654							0.2024509367581686
IRYIAGKMVN	10	Unmodified	_IRYIAGKMVN_					0	0	0		nc|ENSG00000148200|Q15406-3|NR6A1;nc|ENSG00000148200|Q15406-5|NR6A1;nc|ENSG00000148200|Q15406-2|NR6A1;nc|ENSG00000148200|Q15406-4|NR6A1;ENSG00000148200|ENST00000487099|NR6A1	nc|ENSG00000148200|Q15406-3|NR6A1	nc|ENSG00000148200|Q15406-3|NR6A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8328857421875	2	582.831526	1163.6485	-0.83199	-0.00048491	2.73	0.0015911	1.898	0.0011062	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.85934	1	9882	9882		35.618	5.1146	1	796430			18781	4937	12646	12655	21733	21733					0.07322040279245812
IRYQGGREGY	10	Unmodified	_IRYQGGREGY_					0	0	0			REV__ENSG00000175077|ENST00000312295|RTP1	REV__ENSG00000175077|ENST00000312295|RTP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.8001098632812	2	599.801811	1197.58907	-1.4535	-0.00087183	-4.3844	-0.0026298	-5.8379	-0.0035016	599.7990302496783	54.628	0.40671	54.655	54.351	54.758	0.027138					21	14	2	0	0	0	0.8608	1	4864	4864		34.173	8.5985	1	91001	+		18782	22037	12647	12656	21734	21734					-0.001821394105490981
IRYRLGTIR	9	Unmodified	_IRYRLGTIR_					0	0	0		nc|ENSG00000142910|Q9GZM7-3|TINAGL1;ENSG00000142910|ENST00000271064|TINAGL1	nc|ENSG00000142910|Q9GZM7-3|TINAGL1	nc|ENSG00000142910|Q9GZM7-3|TINAGL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3563842773438	2	574.356557	1146.69856	2.697	0.001549	-3.8251	-0.002197	-1.1282	-0.00064797	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.71772	2	10846	10846;10895		39.253	10.103	1	738540			18783	4588	12648	12657	21735;21736	21735					0.13107910999428896
ISAGAGDCN	9	Unmodified	_ISAGAGDCN_					0	0	0		ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47;nc|ENSG00000085433|O94967-2|WDR47	ENSG00000085433|ENST00000369962|WDR47	ENSG00000085433|ENST00000369962|WDR47	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.17059326171875	2	404.16871	806.322867	0.028783	1.1633E-05	2.5917	0.0010475	2.6205	0.0010591	404.17015585403414	78.633	4.5965	78.579	78.135	82.731	-0.053558					226	127	5	0	0	0	0.7932	1	7918	7918		24.519	0.31644	1	6964800			18784	1530	12649	12658	21737	21737					-0.08804146244585809
ISAKRLKDA	9	Unmodified	_ISAKRLKDA_					0	0	0		ENST00000367595.3_1_1:180471678-180471924:-|nuORF	ENST00000367595.3_1_1:180471678-180471924:-|nuORF	ENST00000367595.3_1_1:180471678-180471924:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.7971496582031	2	501.308741	1000.60293	-1.6107	-0.00080746	-2.4706	-0.0012385	-4.0813	-0.002046	501.3102346498901	94.317	0.7395	94.515	94.325	95.065	0.19827					26	17	3	0	0	0	0.20789	1	9576	9576		18.262	6.0554	1	137790			18785	10560	12650	12659	21738	21738					0.10265138088516323
ISALLPPD	8	Unmodified	_ISALLPPD_					0	0	0		ENST00000312655.8_1_17:57430604-57430868:+|nuORF	ENST00000312655.8_1_17:57430604-57430868:+|nuORF	ENST00000312655.8_1_17:57430604-57430868:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.23785400390625	2	413.239461	824.46437	0.89927	0.00037161	-3.9864	-0.0016473	-3.0871	-0.0012757	413.23775271826133	77.246	5.6199	77.651	75.794	81.414	0.40531					207	140	2	0	0	0	0.87922	1	8690	8690		31.955	0	1	1083000			18786	9942	12651	12660	21739	21739					0.045115951201864846
ISALQLKLRGP	11	Unmodified	_ISALQLKLRGP_					0	0	0			REV__nc|ENSG00000291085|Q9H0A3|TMEM191A	REV__nc|ENSG00000291085|Q9H0A3|TMEM191A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.3794555664062	2	598.379697	1194.74484	-0.74115	-0.00044349	3.5243	0.0021089	2.7832	0.0016654	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.7434	1	2995	2995		23.523	3.5259	1	772980	+		18787	30301	12652	12661	21740	21740					0.1552593111080114
ISAPLSGFVV	10	Unmodified	_ISAPLSGFVV_					0	0	0		ENST00000270162.6_1_21:44836209-44836353:-|nuORF	ENST00000270162.6_1_21:44836209-44836353:-|nuORF	ENST00000270162.6_1_21:44836209-44836353:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	495.28277587890625	2	495.286943	988.559333	-0.62487	-0.00030949	-0.36872	-0.00018262	-0.99359	-0.00049211	495.2863165795797	68.562	0.48859	68.698	68.503	68.992	0.13522					42	19	3	0	0	0	0.67608	1	6178	6178		45.952	0	1	108570			18788	9552	12653	12662	21741	21741					0.06459528591381059
ISARTFHL	8	Unmodified	_ISARTFHL_					0	0	0		nc|ENSG00000164796|Q7Z407-5|CSMD3;nc|ENSG00000164796|Q7Z407-3|CSMD3;nc|ENSG00000164796|Q7Z407-4|CSMD3;nc|ENSG00000164796|Q7Z407-2|CSMD3;ENSG00000164796|ENST00000297405|CSMD3	nc|ENSG00000164796|Q7Z407-5|CSMD3	nc|ENSG00000164796|Q7Z407-5|CSMD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.76727294921875	2	472.769252	943.52395	-1.1355	-0.00053681	-3.1204	-0.0014752	-4.2559	-0.002012	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.92457	1	7780	7780		47.916	13.743	1	292450			18789	6004	12654	12663	21742	21742					0.04992910854230104
ISASILGGR	9	Unmodified	_ISASILGGR_					0	0	0			REV__ENSG00000149260|ENST00000648180|CAPN5	REV__ENSG00000149260|ENST00000648180|CAPN5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2619934082031	2	437.261259	872.507966	0.22408	9.7981E-05	2.9853	0.0013054	3.2094	0.0014033	437.26396166885286	43.795	0.2499	43.852	43.716	43.966	0.056744					6	5	2	0	0	0	0.20789	1	3035	3035		15.642	0	1	21111	+		18790	20157	12655	12664	21743	21743					0.0666120461734181
ISATGHRKRIL	11	Unmodified	_ISATGHRKRIL_					0	0	0		ENSG00000120318|ENST00000239440|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3873901367188	2	626.385845	1250.75714	0.93163	0.00058356	0.7057	0.00044204	1.6373	0.0010256	626.3860365402599	114.78	6.8491	114.81	113.18	120.03	0.026466					343	235	2	0	0	0	0.7342	1	12997	12997		25.574	4.7369	1	402840			18791	3125	12656	12665	21744	21744					0.14178967573911905
ISATGHRKRIL	11	Unmodified	_ISATGHRKRIL_					0	0	0		ENSG00000120318|ENST00000239440|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3909301757812	2	626.385845	1250.75714	-1.2033	-0.00075372	2.5834	0.0016182	1.3801	0.00086446	626.3871390536368	109.94	1.1883	109.95	109.68	110.87	0.0060501					79	40	3	0	0	0	0.67778	1	11733	11733		35.152	4.5832	1	879220			18792	3125	12656	12665	21745	21745					0.14178967573911905
ISATGHRKRIL	11	Unmodified	_ISATGHRKRIL_					0	0	0		ENSG00000120318|ENST00000239440|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	626.385845	1250.75714	2.9109	0.0018234	-2.7217	-0.0017048	0.18926	0.00011855	626.3839773256817	114.6	0.98656	114.58	114.37	115.36	-0.024452	-0.036256	-0.0036492	NaN	25.574	59	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	209700			18793	3125	12656	12665							0.14178967573911905
ISATGHRKRIL	11	Unmodified	_ISATGHRKRIL_					0	0	0		ENSG00000120318|ENST00000239440|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	626.385845	1250.75714	2.3208	0.0014537	-0.14858	-9.3068E-05	2.1722	0.0013606	626.8870833535568	114.45	1.3504	114.46	113.91	115.26	0.0094528	-0.15798	-0.00042568	NaN	25.574	121	65	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99322			18794	3125	12656	12665							0.14178967573911905
ISDERVALP	9	Unmodified	_ISDERVALP_					0	0	0			REV__ENST00000588912.1_1_19:10400815-10401250:+|nuORF	REV__ENST00000588912.1_1_19:10400815-10401250:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.275634765625	2	500.277106	998.53966	-1.3118	-0.00065626	-0.60836	-0.00030435	-1.9202	-0.00096061	500.2766168533365	43.901	0.57198	44.675	44.424	44.996	0.77379					20	13	2	0	0	0	0.25483	1	4010	4010		68.787	2.3575	1	1062000	+		18795	29152	12657	12666	21746	21746					0.04033152580609567
ISDQNASGAP	10	Unmodified	_ISDQNASGAP_					0	0	0		ENSG00000065491|ENST00000373491|TBC1D22B	ENSG00000065491|ENST00000373491|TBC1D22B	ENSG00000065491|ENST00000373491|TBC1D22B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.225341796875	2	480.225071	958.435589	0.27485	0.00013199	-0.39974	-0.00019197	-0.12489	-5.9975E-05	480.2247780793244	32.121	0.55891	32.247	31.988	32.546	0.12642					27	12	3	0	0	0	0.47091	1	2242	2242		58.23	3.4536	1	385430			18796	1130	12658	12667	21747	21747					-0.045291742468975826
ISDRIRETS	9	Unmodified	_ISDRIRETS_					0	0	0		ENSG00000284024|ENST00000640019|MSANTD7	ENSG00000284024|ENST00000640019|MSANTD7	ENSG00000284024|ENST00000640019|MSANTD7	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.7876586914062	2	538.78837	1075.56219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.876	1	59.97	59.47	60.47	0.094059								0	0	0	0.32255	1	5151	5151		44.377	5.6236	1				18797	9065	12659	12668	21748	21748					0.02742751978234992
ISERKTKFA	9	Unmodified	_ISERKTKFA_					0	0	0		nc|ENSG00000001497|Q9Y4W2-3|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;ENSG00000001497|ENST00000374811|LAS1L	nc|ENSG00000001497|Q9Y4W2-3|LAS1L	nc|ENSG00000001497|Q9Y4W2-3|LAS1L	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	540.310546875	2	540.314023	1078.61349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.2	1	114.2	113.7	114.7	0								0	0	0	0.301	1	11780	11780		30.318	8.3578	1				18798	14727	12660	12669	21749	21749					0.0773312074295518
ISESHPILY	9	Unmodified	_ISESHPILY_					0	0	0		nc|ENSG00000019102|Q96IQ7-2|VSIG2;ENSG00000019102|ENST00000326621|VSIG2	nc|ENSG00000019102|Q96IQ7-2|VSIG2	nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.779052734375	2	529.779482	1057.54441	-0.33938	-0.0001798	0.36118	0.00019135	0.0218	1.1549E-05	529.7795579963132	64.39	0.96629	64.417	63.833	64.799	0.027145					56	25	3	0	0	0	0.31972	1	6066	6066		63.306	17.354	1	324740			18799	835	12661	12670	21750	21750					0.017940367233904908
ISESHPILY	9	Unmodified	_ISESHPILY_					0	0	0		nc|ENSG00000019102|Q96IQ7-2|VSIG2;ENSG00000019102|ENST00000326621|VSIG2	nc|ENSG00000019102|Q96IQ7-2|VSIG2	nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	529.779482	1057.54441	-0.12329	-6.5316E-05	-0.68115	-0.00036086	-0.80444	-0.00042617	530.2807040627839	64.312	0.72793	64.432	64.153	64.881	0.12005	-0.075012	-0.00076202	NaN	63.306	41	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97601			18800	835	12661	12670							0.017940367233904908
ISESHPILY	9	Unmodified	_ISESHPILY_					0	0	0		nc|ENSG00000019102|Q96IQ7-2|VSIG2;ENSG00000019102|ENST00000326621|VSIG2	nc|ENSG00000019102|Q96IQ7-2|VSIG2	nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	529.779482	1057.54441	-0.68353	-0.00036212	0.57978	0.00030715	-0.10376	-5.4968E-05	529.7796844999074	64.565	0.68369	64.603	64.204	64.888	0.037849	0.096325	0.00057401	NaN	63.306	41	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107910			18801	835	12661	12670							0.017940367233904908
ISFILRAAAVF	11	Unmodified	_ISFILRAAAVF_					0	0	0		ENST00000446673.5_1_3:42544163-42573332:+|nuORF;nc|ENSG00000114812|P32241-4|VIPR1;nc|ENSG00000114812|P32241-5|VIPR1;ENSG00000114812|ENST00000325123|VIPR1;nc|ENSG00000114812|P32241-2|VIPR1	ENST00000446673.5_1_3:42544163-42573332:+|nuORF	ENST00000446673.5_1_3:42544163-42573332:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3670654296875	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.8	1	113.78	113.28	114.28	-0.024452								0	0	0	0.56276	1	12597	12597		14.865	0	1				18802	2791	12662	12671	21751	21751					0.11739143707814037
ISFPNRKIS	9	Unmodified	_ISFPNRKIS_					0	0	0			REV__ENSG00000172935|ENST00000309099|MRGPRF	REV__ENSG00000172935|ENST00000309099|MRGPRF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3082885742188	2	531.308741	1060.60293	-0.3677	-0.00019536	0.13947	7.4101E-05	-0.22823	-0.00012126	531.3086656054257	37.269	0.66434	37.215	36.961	37.625	-0.053558					34	14	3	0	0	0	0.73802	1	2552	2552		37.812	2.1932	1	150080	+		18803	21866	12663	12672	21752	21752					0.07505138088527019
ISFSGRTYPN	10	Unmodified	_ISFSGRTYPN_					0	0	0		ENST00000398922.6_1_11:62433120-62433833:+|nuORF;ENST00000529868.1_1_11:62433120-62433501:+|nuORF	ENST00000398922.6_1_11:62433120-62433833:+|nuORF	ENST00000398922.6_1_11:62433120-62433833:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.7824096679688	2	571.285463	1140.55637	-0.1553	-8.8719E-05	-3.19	-0.0018224	-3.3453	-0.0019111	571.2835995434102	28.442	0.50924	28.402	28.022	28.532	-0.039907					15	11	2	0	0	0	0.86272	1	1436	1436		24.519	1.4767	1	22387			18804	11194	12664	12673	21753	21753					-0.008283465334443463
ISFVFVFV	8	Unmodified	_ISFVFVFV_					0	0	0		chr9:129717347-129719231|24|11.62|0.11|6.76|+|0|TE_info:AluSz6,AluSz6_dup24119,Alu,SINE,donor,-,129717039,129717347|None,PRRX2|1	chr9:129717347-129719231|24|11.62|0.11|6.76|+|0|TE_info:AluSz6,AluSz6_dup24119,Alu,SINE,donor,-,129717039,129717347|None,PRRX2|1	chr9:129717347-129719231|24|11.62|0.11|6.76|+|0|TE_info:AluSz6,AluSz6_dup24119,Alu,SINE,donor,-,129717039,129717347|None,PRRX2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.277587890625	2	479.275847	956.537141	-0.098426	-4.7173E-05	3.2737	0.001569	3.1753	0.0015218	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.9159	1	8185	8185		44.531	12.576	1	1929800			18805	525	12665	12674	21754	21754					0.05713348913616301
ISGLLHSITLL	11	Unmodified	_ISGLLHSITLL_					0	0	0		nc|ENSG00000127946|O00291-3|HIP1;nc|ENSG00000127946|O00291-4|HIP1;ENSG00000127946|ENST00000336926|HIP1	nc|ENSG00000127946|O00291-3|HIP1	nc|ENSG00000127946|O00291-3|HIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	583.8585815429688	2	583.860806	1165.70706	0.74064	0.00043243	-4.0523	-0.002366	-3.3116	-0.0019335	583.8582354915881	98.447	2.0436	98.675	98.127	100.17	0.22788					107	47	4	0	0	0	0.73893	1	10230	10230		24.519	0.31644	1	1023000			18806	3518	12666	12675	21755	21755					0.13083420125371958
ISGSLSLLGL	10	Unmodified	_ISGSLSLLGL_					0	0	0			REV__ENST00000375050.5_1_6:32157573-32157942:-|nuORF	REV__ENST00000375050.5_1_6:32157573-32157942:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.2939758300781	2	480.292225	958.569897	-0.95985	-0.00046101	1.1535	0.00055404	0.19369	9.3029E-05	480.2926803782629	29.996	0.753	29.981	29.577	30.33	-0.015167					23	17	2	0	0	0	0.86589	1	1546	1546		29.15	1.2673	1	38009	+		18807	25805	12667	12676	21756	21756					0.08895511245816579
ISGSMPPVIWV	11	Unmodified	_ISGSMPPVIWV_					0	0	0			REV__nc|ENSG00000089250|P29475-3|NOS1	REV__nc|ENSG00000089250|P29475-3|NOS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.3218383789062	2	593.32046	1184.62637	0.77272	0.00045847	1.4932	0.00088593	2.2659	0.0013444	593.321294730997	41.341	1.0593	41.346	41.006	42.066	0.0043983					55	29	2	0	0	0	0.61774	1	2673	2673		42.396	4.888	1	2399500	+		18808	16968	12668	12677	21757	21757					0.04143815810812157
ISGVKKLM	8	Unmodified	_ISGVKKLM_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D;nc|ENSG00000184588|Q07343-4|PDE4B;nc|ENSG00000184588|Q07343-2|PDE4B;nc|ENSG00000184588|Q07343-3|PDE4B;ENSG00000184588|ENST00000341517|PDE4B	nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000184588|Q07343-4|PDE4B	nc|ENSG00000184588|Q07343-4|PDE4B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2620849609375	2	438.272781	874.531009	0.16508	7.2349E-05	0.84406	0.00036993	1.0091	0.00044228	438.2731304429711	37.268	0.70091	37.368	36.843	37.544	0.099277					30	18	2	0	0	0	0.4196	1	2080	2080		31.955	28.796	1	77028			18809	449;7626	12669	12678	21758	21758					0.0887250741045591
ISGVPMTT	8	Unmodified	_ISGVPMTT_					0	0	0		ENST00000515710.1_1_5:14441357-14465986:+|nuORF	ENST00000515710.1_1_5:14441357-14465986:+|nuORF	ENST00000515710.1_1_5:14441357-14465986:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2091064453125	2	403.209847	804.40514	0.85516	0.00034481	-2.9281	-0.0011806	-2.0729	-0.00083583	403.2085877273137	85.891	2.1457	85.817	85.277	87.423	-0.073761					115	49	4	0	0	0	0.85277	1	8882	8882		25.45	4.9683	1	1526100			18810	13088	12670	12679	21759	21759					-0.004886241656436141
ISGYSSCH	8	Unmodified	_ISGYSSCH_					0	0	0			REV__nc|ENSG00000155052|Q8WYK1|CNTNAP5	REV__nc|ENSG00000155052|Q8WYK1|CNTNAP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.18084716796875	2	427.179078	852.343602	3.1244	0.0013347	0.28935	0.0001236	3.4137	0.0014583	427.1795879486706	102.53	0.57736	102.83	102.43	103.01	0.29865					34	13	4	0	0	0	0.91005	1	12498	12498		42.474	3.453	1	1676500	+		18811	15731	12671	12680	21760	21760					-0.0884755586492929
ISHVTCVDQS	10	Unmodified	_ISHVTCVDQS_					0	0	0		ENST00000529874.5_1_11:118980840-118984381:+|nuORF;ENSG00000172375|ENST00000648610|C2CD2L;nc|ENSG00000172375|O14523-2|C2CD2L	ENST00000529874.5_1_11:118980840-118984381:+|nuORF	ENST00000529874.5_1_11:118980840-118984381:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.8304443359375	2	544.755681	1087.49681	0.49517	0.00026975	2.491	0.001357	2.9862	0.0016268	545.2593161843342	37.152	0.21177	37.638	37.535	37.747	0.4858					5	4	2	0	0	0	0.37624	1	2969	2969		12.812	0.60486	1	51927			18812	6767	12672	12681	21761	21761					-0.04343985539117057
ISIEKGKT	8	Unmodified	_ISIEKGKT_					0	0	0			REV__ENST00000487003.5_1_2:135932989-135933937:+|nuORF	REV__ENST00000487003.5_1_2:135932989-135933937:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.25830078125	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.85277	1	2988	2988		25.45	0	1	5350400	+		18813	27564	12673	12682	21762	21762					0.07010669040232642
ISIGILLGS	9	Unmodified	_ISIGILLGS_					0	0	0			REV__ENSG00000178726|ENST00000377103|THBD	REV__ENSG00000178726|ENST00000377103|THBD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77392578125	2	436.776211	871.537869	-1.6287	-0.0007114	-3.9688	-0.0017335	-5.5976	-0.0024449	436.7743504876495	26.927	0.91903	26.994	26.723	27.642	0.066877					84	43	3	0	0	0	0.7932	1	1055	1055		16.473	0.83134	1	198510	+		18814	22291	12674	12683	21763	21763					0.09696143562678117
ISIGKKRSAQ	10	Unmodified	_ISIGKKRSAQ_					0	0	0			REV__ENST00000431807.6_1_2:197584347-197586267:+|nuORF	REV__ENST00000431807.6_1_2:197584347-197586267:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.833984375	2	544.332747	1086.65094	-0.032009	-1.7423E-05	-1.6375	-0.00089134	-1.6695	-0.00090877	544.3322903323617	17.404	0.27285	16.921	16.718	16.991	-0.48256					6	5	2	0	0	0	0.37624	1	263	263		29.17	3.596	1	32573	+		18815	26626	12675	12684	21764	21764					0.11108212008548435
ISIGKKRSAQ	10	Unmodified	_ISIGKKRSAQ_					0	0	0			REV__ENST00000431807.6_1_2:197584347-197586267:+|nuORF	REV__ENST00000431807.6_1_2:197584347-197586267:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	544.332747	1086.65094	0.0064466	3.5091E-06	-1.0137	-0.00055177	-1.0072	-0.00054826	544.3325932822032	17.507	0.17756	16.896	16.752	16.929	-0.6107	-0.012604	0.00032671	NaN	29.17	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25065	+		18816	26626	12675	12684							0.11108212008548435
ISIIAKDACV	10	Unmodified	_ISIIAKDACV_					0	0	0		chr21:18738025-18745028|30|41.33|0.0|21.98|-|1|TE_info:L2,L2_dup55381,L2,LINE,donor,+,18745028,18745477|MIR548XHG,None|5	chr21:18738025-18745028|30|41.33|0.0|21.98|-|1|TE_info:L2,L2_dup55381,L2,LINE,donor,+,18745028,18745477|MIR548XHG,None|5	chr21:18738025-18745028|30|41.33|0.0|21.98|-|1|TE_info:L2,L2_dup55381,L2,LINE,donor,+,18745028,18745477|MIR548XHG,None|5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7932739257812	2	516.791535	1031.56852	0.70992	0.00036688	3.0022	0.0015515	3.7121	0.0019184	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.86698	1	8687	8687		28.081	1.3886	1	842420			18817	374	12676	12685	21765	21765					0.053995538853769176
ISIIDTMIKS	10	Unmodified	_ISIIDTMIKS_					0	0	0			REV__nc|ENSG00000120160|Q9NQ60-3|EQTN	REV__nc|ENSG00000120160|Q9NQ60-3|EQTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.820068359375	2	560.81775	1119.62095	1.7672	0.00099109	1.9134	0.0010731	3.6806	0.0020642	560.818662901512	92.32	2.1996	92.766	91.879	94.079	0.44661					115	51	3	0	0	0	0.77314	1	11001	11001		40.778	1.5253	1	230230	+		18818	18401	12677	12686	21766	21766					0.06592092228333968
ISISKTGGL	9	Unmodified	_ISISKTGGL_					0	0	0			REV__ENSG00000172867|ENST00000309680|KRT2	REV__ENSG00000172867|ENST00000309680|KRT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2611999511719	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.7932	1	2928	2928		12.207	0	1	2361100	+	+	18819	15991	12678	12687	21767	21767					0.0701066904025538
ISITKITTVM	10	Unmodified	_ISITKITTVM_					0	0	0			REV__ENST00000558140.5_1_15:60802666-60820892:+|nuORF	REV__ENST00000558140.5_1_15:60802666-60820892:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8310546875	2	553.828117	1105.64168	2.0416	0.0011307	1.6336	0.00090472	3.6752	0.0020354	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.85466	1	9708	9708		20.947	0	1	5457600	+		18820	28729	12679	12688	21768	21768					0.09308682608002528
ISIYLSILTTK	11	Unmodified	_ISIYLSILTTK_					0	0	0			REV__chr2:189088772-189089872|16|51.81|0.05|9.92|-|0|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|7	REV__chr2:189088772-189089872|16|51.81|0.05|9.92|-|0|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.2975158691406	3	417.923473	1250.74859	-0.80271	-0.00033547	-0.109	-4.5555E-05	-0.91172	-0.00038103	418.25901330432123	71.495	0.1051	71.456	71.39	71.495	-0.039001					6	5	2	0	0	0	0.17521	1	6950	6950		17.167	15.748	1	17157	+		18821	15744	12680	12689	21769	21769					0.1332455609401677
ISKDKVDTL	9	Unmodified	_ISKDKVDTL_					0	0	0		ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.79266357421875	2	509.792589	1017.57063	-0.014535	-7.4098E-06	-0.42761	-0.00021799	-0.44215	-0.0002254	509.79234442663346	55.706	1.0895	55.696	55.119	56.208	-0.010136					92	29	5	0	0	0	0.014602	2	5023	4937;5023		129.42	17.314	1	5897200			18822	7666	12681	12690	21770;21771	21771					0.06254305894856316
ISKDKVDTL	9	Unmodified	_ISKDKVDTL_					0	0	0		ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.7923889160156	2	509.792589	1017.57063	-0.17968	-9.1599E-05	-0.53192	-0.00027117	-0.7116	-0.00036277	509.79233776485523	55.684	0.9234	55.656	55.256	56.18	-0.027279					81	26	4	0	0	0	2.4207E-08	2	5071	5071;5126		158.07	6.0138	1	6347800			18823	7666	12681	12690	21772;21773	21772					0.06254305894856316
ISKDKVDTL	9	Unmodified	_ISKDKVDTL_					0	0	0		ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.79180908203125	2	509.792589	1017.57063	-0.84186	-0.00042918	0.098611	5.0271E-05	-0.74325	-0.0003789	509.7926689474763	55.638	0.91766	55.669	55.291	56.209	0.030838					81	24	5	0	0	0	0.25415	1	5065	5065		68.846	8.7279	1	6603600			18824	7666	12681	12690	21774	21774					0.06254305894856316
ISKGTKLH	8	Unmodified	_ISKGTKLH_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|21|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|21|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|21|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2738037109375	2	442.271627	882.528701	-0.83468	-0.00036915	-0.31464	-0.00013916	-1.1493	-0.00050831	442.2714568018733	84.382	2.5266	84.818	83.748	86.275	0.43538					144	61	4	0	0	0	0.91472	3	9854	9817;9829;9854		55.504	5.3247	1	3031500			18825	14653	12682	12691	21775;21776;21777	21777					0.08273794996978268
ISKGTKLH	8	Unmodified	_ISKGTKLH_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|21|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|21|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|21|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2717590332031	2	442.271627	882.528701	0.072632	3.2123E-05	-0.92756	-0.00041023	-0.85493	-0.00037811	442.2710823318827	84.471	2.4316	84.918	83.971	86.403	0.44736					123	59	3	0	0	0	0.91977	3	9870	9870;9882;9895		53.351	3.9099	1	2524500			18826	14653	12682	12691	21778;21779;21780	21778					0.08273794996978268
ISKNCIPHLES	11	Unmodified	_ISKNCIPHLES_					0	0	0			REV__nc|ENSG00000170820|P23945-3|FSHR	REV__nc|ENSG00000170820|P23945-3|FSHR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.2155456542969	3	414.216662	1239.62816	1.3279	0.00055002	-3.6994	-0.0015324	-2.3715	-0.00098233	414.2150743373195	34.161	0.99127	34.371	34.024	35.016	0.21003					65	23	4	0	0	0	0.64964	1	2530	2530		38.714	9.1633	1	1141400	+		18827	21689	12683	12692	21781	21781					0.017928248287489623
ISKQEYDE	8	Unmodified	_ISKQEYDE_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000418351.1_1_15:44281261-44281585:-|nuORF;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.2330322265625	2	506.235104	1010.45566	-0.20305	-0.00010279	0.18464	9.347E-05	-0.018415	-9.3225E-06	506.2349460655756	24.815	0.53748	24.778	24.536	25.074	-0.037178					18	11	2	0	0	0	0.93259	1	934	934		51.193	1.1682	1	60744			18828	1338;8080;2370;8106	12684	12693	21782	21782					-0.04915423306954381
ISKQEYDE	8	Unmodified	_ISKQEYDE_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000418351.1_1_15:44281261-44281585:-|nuORF;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	506.235104	1010.45566	0.7044	0.00035659	-1.0513	-0.0005322	-0.34689	-0.00017561	506.2345172832674	24.377	0.62417	24.432	24.045	24.669	0.055487	-0.24291	-0.00076467	NaN	51.193	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44132			18829	1338;8080;2370;8106	12684	12693							-0.04915423306954381
ISKQEYDE	8	Unmodified	_ISKQEYDE_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000418351.1_1_15:44281261-44281585:-|nuORF;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	506.235104	1010.45566	-0.1433	-7.2544E-05	0.042013	2.1269E-05	-0.10129	-5.1275E-05	506.2349851589463	24.861	0.72706	24.815	24.458	25.185	-0.04598	0.1403	0.00034226	NaN	51.193	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54650			18830	1338;8080;2370;8106	12684	12693							-0.04915423306954381
ISKRRGLVKI	10	Unmodified	_ISKRRGLVKI_					0	0	0		nc|ENSG00000173933|Q9BWF3-2|RBM4	nc|ENSG00000173933|Q9BWF3-2|RBM4	nc|ENSG00000173933|Q9BWF3-2|RBM4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.426025390625	2	585.395682	1168.77681	0.45363	0.00026555	0.84676	0.00049569	1.3004	0.00076124	585.395957897535	92.799	0.53889	93.246	92.862	93.401	0.44661					20	12	2	0	0	0	0.37624	1	11015	11015		19.104	0	1	81575			18831	15106	12685	12694	21783	21783					0.19917343584666014
ISKTVKTR	8	Unmodified	_ISKTVKTR_					0	0	0			REV__ENST00000574512.1_1_17:5409229-5421219:-|nuORF	REV__ENST00000574512.1_1_17:5409229-5421219:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7973937988281	2	466.798009	931.581465	0.35994	0.00016802	-1.4055	-0.00065611	-1.0456	-0.00048809	466.79729216650486	19.702	2.2945	19.233	18.459	20.753	-0.46967					107	51	4	0	0	0	0.81567	1	570	570		14.865	1.9057	1	2065900	+		18832	28974	12686	12695	21784	21784					0.11293753059794653
ISKVGIMFLIF	11	Unmodified	_ISKVGIMFLIF_					0	0	0		ENST00000460288.1_1_3:186257375-186257486:-|nuORF	ENST00000460288.1_1_3:186257375-186257486:-|nuORF	ENST00000460288.1_1_3:186257375-186257486:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8826293945312	2	634.377778	1266.741	1.4914	0.00094611	-2.9824	-0.001892	-1.491	-0.00094584	634.3756552594748	112.2	0.31043	112.3	112.17	112.48	0.10638					42	11	4	0	0	0	0.78658	1	12075	12075		14.137	1.9304	1	11155000			18833	12005	12687	12696	21785	21785					0.11830125292772209
ISKVKGKKLTQ	11	Unmodified	_ISKVKGKKLTQ_					0	0	0			REV__ENSG00000164070|ENST00000296464|HSPA4L	REV__ENSG00000164070|ENST00000296464|HSPA4L	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.5364379882812	2	615.40063	1228.78671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.253	1	63.367	62.867	63.867	0.11388								0	0	0	0.56276	1	5533	5533		30.569	3.876	1		+		18834	21023	12688	12697	21786	21786					0.1814648679937818
ISLCPEEQL	9	Carbamidomethyl (C)	_ISLC(Carbamidomethyl (C))PEEQL_	ISLC(1)PEEQL		ISLC(61)PEEQL		0	1	0		ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.7725830078125	2	544.768257	1087.52196	2.103	0.0011456	4.4087	0.0024017	6.5117	0.0035474	544.7703929092856	26.236	0.69928	25.896	25.487	26.186	-0.34035					35	15	4	0	0	0	0.35373	1	1425	1425		60.972	16.441	1	485590			18835	1027	12689	12698	21787	21787	13				-0.018299307365623463
ISLCPLPAAS	10	Unmodified	_ISLCPLPAAS_					0	0	0		ENSG00000174004|ENST00000328557|NRROS	ENSG00000174004|ENST00000328557|NRROS	ENSG00000174004|ENST00000328557|NRROS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.2670593261719	2	486.265153	970.515753	0.66104	0.00032144	3.4294	0.0016676	4.0905	0.0019891	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.86218	1	8500	8500		32.812	0.85756	1	1702800			18836	6904	12690	12699	21788	21788					0.029315958225765826
ISLEALGIL	9	Unmodified	_ISLEALGIL_					0	0	0		nc|ENSG00000119042|Q9UPW6-2|SATB2;ENSG00000119042|ENST00000417098|SATB2	nc|ENSG00000119042|Q9UPW6-2|SATB2	nc|ENSG00000119042|Q9UPW6-2|SATB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7902526855469	2	464.789318	927.564084	-0.5794	-0.0002693	3.5758	0.001662	2.9964	0.0013927	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.69914	1	2237	2237		40.573	3.4135	1	409180			18837	3053	12691	12700	21789	21789					0.09740412734140591
ISLGAWKRQ	9	Unmodified	_ISLGAWKRQ_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.6069946289062	2	529.808908	1057.60326	-1.0822	-0.00057336	0.064539	3.4193E-05	-1.0177	-0.00053916	529.8086955987028	75.692	0.65837	75.78	75.528	76.186	0.087631					31	16	3	0	0	0	0.20789	1	7015	7015		38.806	0	1	240190	+		18838	16685	12692	12701	21790	21790					0.07676557808372309
ISLGRESDF	9	Unmodified	_ISLGRESDF_					0	0	0			REV__ENST00000550016.5_1_12:113600735-113603481:-|nuORF	REV__ENST00000550016.5_1_12:113600735-113603481:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.259033203125	2	512.258914	1022.50327	-0.66054	-0.00033837	2.0492	0.0010497	1.3886	0.00071133	512.2597390876737	29.456	0.69104	29.427	29.171	29.862	-0.029209					31	15	3	0	0	0	0.77244	1	1870	1870		32.812	0.85756	1	222240	+		18839	18524	12693	12702	21791	21791					-0.007077243161006663
ISLILKIKATF	11	Unmodified	_ISLILKIKATF_					0	0	0		ENSG00000214694|ENST00000409978|ARHGEF33;nc|ENSG00000214694|A8MVX0|ARHGEF33	ENSG00000214694|ENST00000409978|ARHGEF33	ENSG00000214694|ENST00000409978|ARHGEF33	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	623.9161987304688	2	623.910299	1245.80605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.91	1	109.98	109.48	110.48	0.068001								0	0	0	0.56276	1	13346	13346		8.6937	1.5003	1				18840	8633	12694	12703	21792	21792					0.19297443090249544
ISLILKIKATF	11	Unmodified	_ISLILKIKATF_					0	0	0		ENSG00000214694|ENST00000409978|ARHGEF33;nc|ENSG00000214694|A8MVX0|ARHGEF33	ENSG00000214694|ENST00000409978|ARHGEF33	ENSG00000214694|ENST00000409978|ARHGEF33	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	623.9158325195312	2	623.910299	1245.80605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.11	1	110.18	109.68	110.68	0.068001								0	0	0	0.56276	1	13368	13368		13.454	1.943	1				18841	8633	12694	12703	21793	21793					0.19297443090249544
ISLLLRFF	8	Unmodified	_ISLLLRFF_					0	0	0			REV__ENST00000486860.5_1_7:87838471-87849341:-|nuORF	REV__ENST00000486860.5_1_7:87838471-87849341:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.8174743652344	2	504.81567	1007.61679	2.4194	0.0012214	1.8267	0.00092216	4.2461	0.0021435	504.8165438443187	99.316	0.71481	99.678	99.409	100.12	0.36292					44	17	3	0	0	0	0.84341	1	12028	12028		24.203	2.5004	1	885230	+		18842	27561	12695	12704	21794	21794					0.11328415587615837
ISLLVTPAI	9	Unmodified	_ISLLVTPAI_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-4|ADGRV1;nc|ENSG00000164199|Q8WXG9-3|ADGRV1;ENST00000504142.2_2_5:89924394-89949789:+|nuORF	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8006591796875	2	463.799686	925.584819	0.22161	0.00010278	1.3447	0.00062365	1.5663	0.00072643	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.7932	1	3528	3528		24.203	0	1	1570500			18843	5938	12696	12705	21795	21795					0.11905003113781731
ISLREWRKIQY	11	Unmodified	_ISLREWRKIQY_					0	0	0		nc|ENSG00000111801|O00478-2|BTN3A3	nc|ENSG00000111801|O00478-2|BTN3A3	nc|ENSG00000111801|O00478-2|BTN3A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.28594970703125	3	497.952537	1490.83578	-0.26391	-0.00013141	-2.2518	-0.0011213	-2.5157	-0.0012527	497.9513595269569	17.389	0.40384	17.31	17.13	17.534	-0.079056					39	17	3	0	0	0	0.76579	1	213	213		18.531	5.5736	1	123420			18844	14847	12697	12706	21796	21796					0.10999775088339447
ISLSAKIERK	10	Unmodified	_ISLSAKIERK_					0	0	0		ENSG00000113369|ENST00000265138|ARRDC3	ENSG00000113369|ENST00000265138|ARRDC3	ENSG00000113369|ENST00000265138|ARRDC3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.3182983398438	2	572.856055	1143.69756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.27	1	114.36	113.86	114.86	0.098114								0	0	0	0.45132	1	12232	12232		10.866	0.6003	1				18845	2719	12698	12707	21797	21797					0.13145651839840866
ISLSVIVPV	9	Unmodified	_ISLSVIVPV_					0	0	0		ENSG00000143297|ENST00000361835|FCRL5;nc|ENSG00000143297|Q96RD9-3|FCRL5	ENSG00000143297|ENST00000361835|FCRL5	ENSG00000143297|ENST00000361835|FCRL5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8005676269531	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3007	3007		19.36	5.5846	1	890090			18846	4614	12699	12708	21798	21798					0.11905003113804469
ISLTPWKP	8	Unmodified	_ISLTPWKP_					0	0	0		ENSG00000185862|ENST00000330927|EVI2B;nc|ENSG00000185862|P34910-2|EVI2B	ENSG00000185862|ENST00000330927|EVI2B	ENSG00000185862|ENST00000330927|EVI2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.25604248046875	2	471.276378	940.538203	-0.96728	-0.00045586	-3.317	-0.0015632	-4.2842	-0.0020191	471.27479183528516	29.863	0.52175	29.892	29.575	30.096	0.028618					14	11	2	0	0	0	0.4196	1	1940	1940		23.042	0	1	36519			18847	7748	12700	12709	21799	21799					0.06555563282506682
ISMPYMTL	8	Unmodified	_ISMPYMTL_					0	0	0			REV__ENST00000495197.1_1_10:38368986-38369799:-|nuORF	REV__ENST00000495197.1_1_10:38368986-38369799:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.23577880859375	2	478.235007	954.455461	-1.6933	-0.00080982	0.75702	0.00036204	-0.93632	-0.00044778	478.23521025919547	44.024	0.58456	44.024	43.744	44.329	0					32	13	3	0	0	0	0.91005	1	3188	3188		42.474	8.9589	1	186720	+		18848	27732	12701	12710	21800	21800					-0.023588378321392156
ISMRWTRFRKL	11	Unmodified	_ISMRWTRFRKL_					0	0	0		ENST00000281523.7_1_3:21606151-21706421:-|nuORF	ENST00000281523.7_1_3:21606151-21706421:-|nuORF	ENST00000281523.7_1_3:21606151-21706421:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.6241455078125	3	498.622246	1492.84491	-0.6857	-0.00034191	2.2273	0.0011106	1.5416	0.00076868	498.62329502123123	21.623	1.0354	21.565	21.112	22.147	-0.057203					74	42	2	0	0	0	0.79476	1	611	611		12.433	2.3289	1	54712			18849	9626	12702	12711	21801	21801					0.11819845172976784
ISNNEKNM	8	Unmodified	_ISNNEKNM_					0	0	0			REV__ENST00000304886.6_2_20:10256164-10273556:+|nuORF	REV__ENST00000304886.6_2_20:10256164-10273556:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.22308349609375	2	475.224017	948.43348	0.16074	7.6388E-05	0.12309	5.8496E-05	0.28383	0.00013488	475.2239634085171	26.709	1.9087	26.533	25.72	27.628	-0.17559					69	42	2	0	0	0	0.90983	1	1514	1514		42.396	5.9494	1	124270	+		18850	24810	12703	12712	21802	21802					-0.04279926256356248
ISPIDVESLSA	11	Unmodified	_ISPIDVESLSA_					0	0	0			REV__nc|ENSG00000135317|Q9Y5W7-2|SNX14	REV__nc|ENSG00000135317|Q9Y5W7-2|SNX14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.2836303710938	2	565.800611	1129.58667	0.36649	0.00020736	1.6374	0.00092646	2.0039	0.0011338	565.8015473208517	75.916	0.36761	76.311	76.119	76.486	0.39507					14	8	2	0	0	0	0.17502	1	8612	8612		36.447	4.9169	1	179080	+		18851	29863	12704	12713	21803	21803					0.027059673411031326
ISPKNDIIK	9	Unmodified	_ISPKNDIIK_					0	0	0			REV__nc|ENSG00000085563|P08183-2|ABCB1	REV__nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.3128051757812	2	514.310949	1026.60735	0.46246	0.00023785	-0.94914	-0.00048815	-0.48668	-0.0002503	514.3102777906522	63.385	1.131	63.939	63.555	64.686	0.55449					37	26	2	0	0	0	0.26953	1	6866	6866		67.494	5.3863	1	282390	+		18852	16894	12705	12714	21804	21804					0.09510602511409161
ISPKNDIIK	9	Unmodified	_ISPKNDIIK_					0	0	0			REV__nc|ENSG00000085563|P08183-2|ABCB1	REV__nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	514.310949	1026.60735	-0.278	-0.00014298	-0.10431	-5.3649E-05	-0.38231	-0.00019663	514.3107532359166	63.524	0.77771	63.911	63.531	64.308	0.38681	-0.014112	0.00046436	NaN	67.494	30	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183420	+		18853	16894	12705	12714							0.09510602511409161
ISPKNDIIK	9	Unmodified	_ISPKNDIIK_					0	0	0			REV__nc|ENSG00000085563|P08183-2|ABCB1	REV__nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	514.310949	1026.60735	0.46246	0.00023785	-0.94914	-0.00048815	-0.48668	-0.0002503	514.3102777906522	63.385	1.131	63.939	63.555	64.686	0.55449	0.014112	-0.00040465	NaN	67.494	37	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	282390	+		18854	16894	12705	12714							0.09510602511409161
ISPLHYPL	8	Unmodified	_ISPLHYPL_					0	0	0			REV__ENST00000461003.5_1_1:161022149-161022579:-|nuORF	REV__ENST00000461003.5_1_1:161022149-161022579:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.26751708984375	2	470.268553	938.522553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.15	1	61.704	61.204	62.204	0.55386								0	0	0	0.29568	1	6530	6530		35.201	0	1		+		18855	22859	12706	12715	21805	21805					0.05083276765458322
ISPLQRIDG	9	Unmodified	_ISPLQRIDG_					0	0	0			REV__ENSG00000127311|ENST00000247815|HELB	REV__ENSG00000127311|ENST00000247815|HELB	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	499.7836608886719	2	499.785099	997.555644	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.259	1	62.226	61.726	62.726	-0.033173								0	0	0	0.30778	1	5897	5897		27.882	0	1		+		18856	18726	12707	12716	21806	21806					0.05676858817514585
ISPPCLYASF	10	Unmodified	_ISPPCLYASF_					0	0	0			REV__ENSG00000171505|ENST00000304880|OR1N1	REV__ENSG00000171505|ENST00000304880|OR1N1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.2760009765625	2	549.270435	1096.52632	-1.3279	-0.00072939	3.4784	0.0019106	2.1505	0.0011812	549.2722721223713	43.521	0.52309	43.521	43.221	43.744	0					23	12	2	0	0	0	0.80179	1	3076	3076		39.253	2.0937	1	162310	+		18857	21743	12708	12717	21807	21807					-0.01808421522991921
ISPRPRVAS	9	Unmodified	_ISPRPRVAS_					0	0	0		ENST00000476927.5_1_7:112091109-112095874:+|nuORF	ENST00000476927.5_1_7:112091109-112095874:+|nuORF	ENST00000476927.5_1_7:112091109-112095874:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7955017089844	2	491.793258	981.571963	0.42504	0.00020903	4.4189	0.0021732	4.8439	0.0023822	491.7954861357076	59.345	2.1315	59.459	58.989	61.12	0.11396					113	74	3	0	0	0	0.7932	1	5107	5107		19.997	0.6368	1	139720			18858	12346	12709	12718	21808	21808					0.08043984774269575
ISQHQEHFIQ	10	Unmodified	_ISQHQEHFIQ_					0	0	0		nc|ENSG00000119318|P54727-2|RAD23B;ENSG00000119318|ENST00000358015|RAD23B	nc|ENSG00000119318|P54727-2|RAD23B	nc|ENSG00000119318|P54727-2|RAD23B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.8136596679688	2	633.814919	1265.61528	-0.40794	-0.00025856	0.43774	0.00027745	0.029802	1.8889E-05	633.8151815073458	76.07	0.77838	76.07	75.699	76.477	0					74	27	4	0	0	0	0.71918	1	6932	6932		39.253	15.73	1	231670			18859	3060	12710	12719	21809	21809					-0.006898702391026745
ISQHQEHFIQ	10	Unmodified	_ISQHQEHFIQ_					0	0	0		nc|ENSG00000119318|P54727-2|RAD23B;ENSG00000119318|ENST00000358015|RAD23B	nc|ENSG00000119318|P54727-2|RAD23B	nc|ENSG00000119318|P54727-2|RAD23B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.814453125	2	633.814919	1265.61528	0.41115	0.00026059	-0.35296	-0.00022371	0.058189	3.6881E-05	633.8146373815393	75.69	0.90498	75.736	75.32	76.224	0.046448					72	23	4	0	0	0	0.79014	1	7394	7394		35.152	0	1	489770			18860	3060	12710	12719	21810	21810					-0.006898702391026745
ISQHQEHFIQ	10	Unmodified	_ISQHQEHFIQ_					0	0	0		nc|ENSG00000119318|P54727-2|RAD23B;ENSG00000119318|ENST00000358015|RAD23B	nc|ENSG00000119318|P54727-2|RAD23B	nc|ENSG00000119318|P54727-2|RAD23B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.8155517578125	2	633.814919	1265.61528	0.70689	0.00044804	-0.62849	-0.00039835	0.078393	4.9687E-05	633.8144115659621	75.62	0.84026	75.753	75.398	76.239	0.13326					67	23	4	0	0	0	0.49027	1	7029	7029		44.377	10.205	1	311410			18861	3060	12710	12719	21811	21811					-0.006898702391026745
ISQLQAALAV	10	Unmodified	_ISQLQAALAV_					0	0	0			REV__nc|ENSG00000139496|Q9BVL2-2|NUP58	REV__nc|ENSG00000139496|Q9BVL2-2|NUP58	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.3013916015625	2	507.303124	1012.5917	-0.47968	-0.00024334	0.58474	0.00029664	0.10506	5.3297E-05	507.3032810804758	70.788	0.91948	71.172	70.832	71.751	0.38416					44	21	3	0	0	0	0.30722	1	7880	7880		71.877	4.3838	1	638460	+		18862	19541	12711	12720	21812	21812					0.08590315994354114
ISQSTALAR	9	Unmodified	_ISQSTALAR_					0	0	0		nc|ENSG00000168014|Q4AC94-2|C2CD3;nc|ENSG00000168014|Q4AC94-4|C2CD3;nc|ENSG00000168014|Q4AC94-1|C2CD3;nc|ENSG00000168014|Q4AC94-3|C2CD3;ENSG00000168014|ENST00000334126|C2CD3;ENST00000415191.6_1_11:73824618-73881837:-|nuORF	nc|ENSG00000168014|Q4AC94-2|C2CD3	nc|ENSG00000168014|Q4AC94-2|C2CD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.76763916015625	2	473.769448	945.524344	0.37537	0.00017784	-0.39462	-0.00018696	-0.019248	-9.1192E-06	473.76915790053243	28.466	0.54151	28.502	28.223	28.764	0.03607					29	16	3	0	0	0	0.6204	1	1342	1342		45.972	0.020292	1	57511			18863	6356	12712	12721	21813	21813					0.04940285783402487
ISQTKEVTL	9	Unmodified	_ISQTKEVTL_					0	0	0		ENSG00000180043|ENST00000424985|GARIN5B	ENSG00000180043|ENST00000424985|GARIN5B	ENSG00000180043|ENST00000424985|GARIN5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.79254150390625	2	509.792589	1017.57063	-0.17968	-9.1599E-05	-0.53192	-0.00027117	-0.7116	-0.00036277	509.79233776485523	55.684	0.9234	55.656	55.256	56.18	-0.027279					81	26	4	0	0	0	0.017216	2	5060	5049;5060		127.46	6.6819	1	6347800			18864	7313	12713	12722	21814;21815	21815					0.06254305894856316
ISQTKEVTL	9	Unmodified	_ISQTKEVTL_					0	0	0		ENSG00000180043|ENST00000424985|GARIN5B	ENSG00000180043|ENST00000424985|GARIN5B	ENSG00000180043|ENST00000424985|GARIN5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.7923889160156	2	509.792589	1017.57063	-0.84186	-0.00042918	0.098611	5.0271E-05	-0.74325	-0.0003789	509.7926689474763	55.638	0.91766	55.669	55.291	56.209	0.030838					81	24	5	0	0	0	0.010555	1	5041	5041		132.76	4.1557	1	6603600			18865	7313	12713	12722	21816	21816					0.06254305894856316
ISRAEFIVQGS	11	Unmodified	_ISRAEFIVQGS_					0	0	0			REV__ENSG00000183960|ENST00000328405|KCNH8	REV__ENSG00000183960|ENST00000328405|KCNH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	603.825439453125	2	603.827495	1205.64044	-0.59862	-0.00036146	-1.0573	-0.00063845	-1.656	-0.00099991	603.8268481283726	43.91	0.48102	43.877	43.623	44.104	-0.03347					20	11	2	0	0	0	0.37012	1	3457	3457		61.691	12.155	1	128450	+		18866	22638	12714	12723	21817	21817					0.04584184563464078
ISRAEFIVQGS	11	Unmodified	_ISRAEFIVQGS_					0	0	0			REV__ENSG00000183960|ENST00000328405|KCNH8	REV__ENSG00000183960|ENST00000328405|KCNH8	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	603.827495	1205.64044	-0.59862	-0.00036146	-1.0573	-0.00063845	-1.656	-0.00099991	603.8268481283726	43.91	0.48102	43.877	43.623	44.104	-0.03347	-0.039986	-0.00017827	NaN	61.691	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128450	+		18867	22638	12714	12723							0.04584184563464078
ISSEVQILT	9	Unmodified	_ISSEVQILT_					0	0	0		ENSG00000144820|ENST00000273352|ADGRG7	ENSG00000144820|ENST00000273352|ADGRG7	ENSG00000144820|ENST00000273352|ADGRG7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2789306640625	2	495.279315	988.544076	-0.77908	-0.00038586	0.99546	0.00049303	0.21638	0.00010717	495.27958038905666	70.424	0.79384	70.809	70.542	71.336	0.38416					39	18	3	0	0	0	0.66686	1	7832	7832		42.864	2.0861	1	312970			18868	4733	12715	12724	21818	21818					0.04934617003527819
ISSPKESDA	9	Unmodified	_ISSPKESDA_					0	0	0			REV__ENSG00000152952|ENST00000282903|PLOD2	REV__ENSG00000152952|ENST00000282903|PLOD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2299499511719	2	467.229822	932.445091	-0.068521	-3.2015E-05	0.36663	0.0001713	0.2981	0.00013928	467.2298152633158	24.377	0.99719	24.334	23.879	24.876	-0.043221					49	22	3	0	0	0	0.41566	1	911	911		56.721	0	1	314120	+		18869	20323	12716	12725	21819	21819					-0.02383405961381868
ISSQTLVLVF	10	Unmodified	_ISSQTLVLVF_					0	0	0			REV__ENSG00000128271|ENST00000337539|ADORA2A;REV__ENSG00000170425|ENST00000304222|ADORA2B	REV__ENSG00000170425|ENST00000304222|ADORA2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8297729492188	2	553.826432	1105.63831	3.3341	0.0018465	3.5614	0.0019724	6.8955	0.0038189	553.8282134205963	102.58	0.81242	102.53	102.22	103.03	-0.047005					43	19	3	0	0	0	0.8505	1	11220	11220		19.104	1.6355	1	563570	+		18870	18765;21659	12717	12726	21820	21820					0.08971755825655237
ISSVSDWLI	9	Unmodified	_ISSVSDWLI_					0	0	0		ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.27618408203125	2	510.274032	1018.53351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.272	1	55.264	54.764	55.764	-0.0077095								0	0	0	0.16145	1	4915	4915		71.296	2.5089	1				18871	2626	12718	12727	21821	21821					0.02498634349092299
ISSVSSAPTLL	11	Unmodified	_ISSVSSAPTLL_					0	0	0		nc|ENSG00000124782|Q92766-5|RREB1;nc|ENSG00000124782|Q92766-3|RREB1;nc|ENSG00000124782|Q92766|RREB1;ENSG00000124782|ENST00000379938|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.8057250976562	2	537.805697	1073.59684	-1.206	-0.00064858	2.2108	0.001189	1.0049	0.00054043	537.8068072259658	58.499	0.79393	58.891	58.44	59.234	0.39209					32	18	2	0	0	0	0.43408	1	6129	6129		56.721	0	1	645250			18872	3359	12719	12728	21822	21822					0.06298575066330159
ISSYDPKSLLE	11	Unmodified	_ISSYDPKSLLE_					0	0	0			REV__ENSG00000162104|ENST00000294016|ADCY9	REV__ENSG00000162104|ENST00000294016|ADCY9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3282470703125	2	626.326993	1250.63943	-0.062907	-3.94E-05	1.1253	0.00070478	1.0624	0.00066538	626.3275040017871	53.127	1.167	53.144	52.533	53.7	0.017487					73	31	3	0	0	0	0.72374	1	4668	4668		18.262	1.5447	1	169450	+		18873	20795	12720	12729	21823	21823					0.024139254039027946
ISTIIGVCV	9	Unmodified	_ISTIIGVCV_					0	0	0		nc|ENSG00000182077|Q3KNS1|PTCHD3	nc|ENSG00000182077|Q3KNS1|PTCHD3	nc|ENSG00000182077|Q3KNS1|PTCHD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.7630310058594	2	452.762246	903.50994	-1.3226	-0.00059885	3.4873	0.0015789	2.1646	0.00098005	452.76390903784943	39.71	0.76369	39.666	39.287	40.051	-0.043697					44	17	3	0	0	0	0.7932	1	2878	2878		24.203	2.2429	1	126860			18874	15138	12721	12730	21824	21824					0.0543249731092601
ISTKNSLRL	9	Unmodified	_ISTKNSLRL_					0	0	0		ENST00000568805.5_1_16:20809048-20811281:-|nuORF;nc|ENSG00000196678|A8K979-2|ERI2;ENSG00000196678|ENST00000357967|ERI2	ENST00000568805.5_1_16:20809048-20811281:-|nuORF	ENST00000568805.5_1_16:20809048-20811281:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3116455078125	2	516.314023	1030.61349	2.4463	0.0012631	-2.1693	-0.00112	0.27709	0.00014307	516.3127117478653	113.99	1.2381	114.01	113.16	114.4	0.020027					83	56	2	0	0	0	0.77696	1	13797	13797		31.53	6.0796	1	57415			18875	8092	12722	12731	21825	21825					0.09941120742928433
ISTKWSLHGVR	11	Unmodified	_ISTKWSLHGVR_					0	0	0		chr1:52604138-52606684|13|16.62|0.21|6.31|+|2|TE_info:L2a,L2a_dup4344,L2,LINE,donor,-,52603991,52604138|None,GPX7|2	chr1:52604138-52606684|13|16.62|0.21|6.31|+|2|TE_info:L2a,L2a_dup4344,L2,LINE,donor,-,52603991,52604138|None,GPX7|2	chr1:52604138-52606684|13|16.62|0.21|6.31|+|2|TE_info:L2a,L2a_dup4344,L2,LINE,donor,-,52603991,52604138|None,GPX7|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3678588867188	2	642.364579	1282.7146	-0.042196	-2.7105E-05	-2.5283	-0.0016241	-2.5705	-0.0016512	642.3635952564791	110.33	1.0043	110.28	110.08	111.09	-0.055077					98	36	3	0	0	0	0.74763	1	12071	12071		22.58	2.5829	1	348750			18876	53	12723	12732	21826	21826					0.08455572445632242
ISTRKHCLD	9	Unmodified	_ISTRKHCLD_					0	0	0		ENST00000456217.5_1_10:18940314-18944051:-|nuORF;ENST00000377304.6_1_10:18940314-18940518:-|nuORF	ENST00000456217.5_1_10:18940314-18944051:-|nuORF	ENST00000456217.5_1_10:18940314-18944051:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2534790039062	2	536.782033	1071.54951	-0.44672	-0.00023979	-3.8529	-0.0020682	-4.2996	-0.002308	536.7795997674118	79.278	0.46968	79.827	79.701	80.17	0.54945					18	10	2	0	0	0	0.20789	1	9121	9121		19.104	3.4617	1	65475			18877	10834	12724	12733	21827	21827					0.01660017314338802
ISTSTTVATF	10	Unmodified	_ISTSTTVATF_					0	0	0		ENSG00000163251|ENST00000295417|FZD5	ENSG00000163251|ENST00000295417|FZD5	ENSG00000163251|ENST00000295417|FZD5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.2694702148438	2	514.268947	1026.52334	0.58068	0.00029863	-0.5321	-0.00027364	0.04858	2.4983E-05	514.2686133611016	76.853	0.54735	77.253	76.951	77.499	0.3997					28	19	2	0	0	0	0.43769	1	8733	8733		60.972	3.1607	1	444300			18878	5777	12725	12734	21828	21828					0.011140266238498953
ISTTTHYN	8	Unmodified	_ISTTTHYN_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1;nc|ENSG00000106278|P23471-3|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7226257324219	2	468.724707	935.43486	-1.2296	-0.00057635	-1.9244	-0.000902	-3.154	-0.0014784	468.7238369987016	86.792	1.5636	87.247	86.655	88.219	0.4543					99	37	4	0	0	0	0.9295	1	10303	10303		55.504	6.2934	1	4103600			18879	2287	12726	12735	21829	21829					-0.03543968895951366
ISVAKDPK	8	Unmodified	_ISVAKDPK_					0	0	0			REV__ENST00000466373.1_1_22:19439515-19452862:-|nuORF	REV__ENST00000466373.1_1_22:19439515-19452862:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.26080322265625	2	429.258185	856.501818	2.1517	0.00092364	3.1502	0.0013523	5.3019	0.0022759	429.25947001125115	112.21	1.2761	112.24	112.06	113.34	0.030602					64	53	2	0	0	0	0.89962	1	13576	13576		38.806	6.8513	1	985750	+		18880	16591	12727	12736	21830	21830					0.06782686385793113
ISVAKDPK	8	Unmodified	_ISVAKDPK_					0	0	0			REV__ENST00000466373.1_1_22:19439515-19452862:-|nuORF	REV__ENST00000466373.1_1_22:19439515-19452862:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	429.258185	856.501818	-1.6321	-0.0007006	7.0711	0.0030353	5.439	0.0023347	429.261081467172	112.19	0.25371	112.3	112.2	112.45	0.10638	0.023689	0.0025193	NaN	38.806	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183860	+		18881	16591	12727	12736							0.06782686385793113
ISVAKDPK	8	Unmodified	_ISVAKDPK_					0	0	0			REV__ENST00000466373.1_1_22:19439515-19452862:-|nuORF	REV__ENST00000466373.1_1_22:19439515-19452862:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	429.258185	856.501818	0.73399	0.00031507	4.7687	0.002047	5.5027	0.0023621	429.26021349713176	112.22	0.2012	112.29	112.11	112.31	0.066025	0.01236	0.0005426	NaN	38.806	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	296100	+		18882	16591	12727	12736							0.06782686385793113
ISVAKDPK	8	Unmodified	_ISVAKDPK_					0	0	0			REV__ENST00000466373.1_1_22:19439515-19452862:-|nuORF	REV__ENST00000466373.1_1_22:19439515-19452862:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	429.258185	856.501818	2.1517	0.00092364	3.1502	0.0013523	5.3019	0.0022759	429.25947001125115	112.21	1.2761	112.24	112.06	113.34	0.030602	-0.036049	-0.0008469	NaN	38.806	64	53	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	985750	+		18883	16591	12727	12736							0.06782686385793113
ISVFHHKLI	9	Unmodified	_ISVFHHKLI_					0	0	0		ENSG00000214814|ENST00000522917|FER1L6	ENSG00000214814|ENST00000522917|FER1L6	ENSG00000214814|ENST00000522917|FER1L6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3311157226562	2	547.329476	1092.6444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.56	1	118.46	117.96	118.96	-0.10152								0	0	0	0.34348	1	14107	14107		16.473	0	1				18884	8638	12728	12737	21831	21831					0.10178318847852097
ISVFVCHF	8	Unmodified	_ISVFVCHF_					0	0	0			REV__nc|ENSG00000146038|Q9UHG0-2|DCDC2	REV__nc|ENSG00000146038|Q9UHG0-2|DCDC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.2420349121094	2	476.241481	950.468409	-0.088031	-4.1924E-05	3.3609	0.0016006	3.2729	0.0015587	476.24313325710256	35.371	0.60776	35.358	35	35.608	-0.012203					30	13	3	0	0	0	0.88915	1	2202	2202		35.201	1.6851	1	173620	+		18885	29915	12729	12738	21832	21832					-0.008806386577475678
ISVHLLCPRAV	11	Unmodified	_ISVHLLCPRAV_					0	0	0		ENST00000569488.1_1_16:85011531-85024224:-|nuORF	ENST00000569488.1_1_16:85011531-85024224:-|nuORF	ENST00000569488.1_1_16:85011531-85024224:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3539428710938	2	604.352625	1206.6907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.658	1	66.21	65.71	66.71	0.5526								0	0	0	0.56276	1	7158	7158		27.882	1.1893	1				18886	13980	12730	12739	21833	21833					0.09562015687606618
ISVIAPLTL	9	Unmodified	_ISVIAPLTL_					0	0	0			REV__ENSG00000076356|ENST00000367033|PLXNA2	REV__ENSG00000076356|ENST00000367033|PLXNA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8016357421875	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3238	3238		21.96	2.5999	1	942760	+		18887	16725	12731	12740	21834	21834					0.11905003113804469
ISVIHSKN	8	Unmodified	_ISVIHSKN_					0	0	0		nc|ENSG00000115155|Q9HC10-5|OTOF;ENSG00000115155|ENST00000272371|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2607421875	2	449.261259	896.507966	-0.10987	-4.936E-05	-1.2586	-0.00056544	-1.3685	-0.0006148	449.26053823357574	68.09	1.1232	68.638	68.16	69.283	0.54819					61	26	4	0	0	0	0.91982	1	7514	7514		45.972	7.1661	1	1909000			18888	2814	12732	12741	21835	21835					0.055572046173210765
ISVPSFFIN	9	Unmodified	_ISVPSFFIN_					0	0	0			REV__CON__P34955;REV__nc|ENSG00000197249|P01009-2|SERPINA1;REV__ENSG00000186910|ENST00000334708|SERPINA11	REV__CON__P34955	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2821044921875	2	512.279118	1022.54368	1.2711	0.00065114	3.0878	0.0015818	4.3588	0.0022329	512.2806294768477	86.671	3.241	86.597	85.234	88.475	-0.074005					135	75	2	0	0	0	0.78058	1	8977	8977		30.504	1.3541	1	387010	+	+	18889	15990;30135;22890	12733	12742	21836	21836					0.03331242074318652
ISVQPKGKYT	10	Unmodified	_ISVQPKGKYT_					0	0	0			REV__nc|ENSG00000053770|Q9H0R1-2|AP5M1	REV__nc|ENSG00000053770|Q9H0R1-2|AP5M1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.8200073242188	2	560.821681	1119.62881	0.78776	0.00044179	-4.1287	-0.0023155	-3.341	-0.0018737	560.8192753742564	92.439	2.8901	92.598	91.192	94.082	0.15874					209	68	4	0	0	0	0.80179	1	9382	9382		39.253	2.8061	1	872010	+		18890	16392	12734	12743	21837	21837					0.07377987540144204
ISVQPKGKYT	10	Unmodified	_ISVQPKGKYT_					0	0	0			REV__nc|ENSG00000053770|Q9H0R1-2|AP5M1	REV__nc|ENSG00000053770|Q9H0R1-2|AP5M1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8198852539062	2	560.821681	1119.62881	-1.4169	-0.00079462	-1.874	-0.001051	-3.2909	-0.0018456	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.85981	1	9293	9293		35.152	2.3396	1	758020	+		18891	16392	12734	12743	21838	21838					0.07377987540144204
ISVVVALFVYR	11	Unmodified	_ISVVVALFVYR_					0	0	0		nc|ENSG00000182168|O95185-2|UNC5C;ENSG00000182168|ENST00000453304|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5933837890625	3	422.592058	1264.75434	-0.80518	-0.00034026	2.6379	0.0011148	1.8327	0.0007745	422.59310710706274	46.905	2.5172	47.828	47.069	49.587	0.92315					149	61	4	0	0	0	0.78683	1	4429	4429		14.086	2.4501	1	3696000			18892	7429	12735	12744	21839	21839					0.13255699396381715
ISWGAFIYAPV	11	Unmodified	_ISWGAFIYAPV_					0	0	0			REV__ENSG00000139133|ENST00000266483|ALG10	REV__ENSG00000139133|ENST00000266483|ALG10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.3230590820312	2	612.326599	1222.63865	0.10273	6.2906E-05	-3.0786	-0.0018851	-2.9758	-0.0018222	612.3247769908639	64.192	0.67451	64.158	63.85	64.525	-0.034256					28	17	2	0	0	0	0.43408	1	6122	6122		56.721	13.857	1	103750	+		18893	19518	12736	12745	21840	21840					0.0362317554549918
ISWGAFIYAPV	11	Unmodified	_ISWGAFIYAPV_					0	0	0			REV__ENSG00000139133|ENST00000266483|ALG10	REV__ENSG00000139133|ENST00000266483|ALG10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	612.326599	1222.63865	-1.3354	-0.00081772	-1.6587	-0.0010156	-2.9941	-0.0018334	612.325836953922	64.156	0.52887	64.184	63.91	64.439	0.027138	0.012882	0.00096708	NaN	56.721	23	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66540	+		18894	19518	12736	12745							0.0362317554549918
ISWGSPVTIW	10	Unmodified	_ISWGSPVTIW_					0	0	0		nc|ENSG00000204577|O75022|LILRB3;nc|ENSG00000204577|O75022-3|LILRB3;nc|ENSG00000204577|O75022-2|LILRB3;nc|ENSG00000244482|Q6PI73-2|LILRA6;nc|ENSG00000244482|Q6PI73|LILRA6;ENSG00000244482|ENST00000396365|LILRA6;ENSG00000204577|ENST00000445347|LILRB3	nc|ENSG00000204577|O75022|LILRB3	nc|ENSG00000204577|O75022|LILRB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8002319335938	2	573.303124	1144.5917	0.13285	7.6165E-05	-3.0882	-0.0017705	-2.9553	-0.0016943	573.3010736764967	72.451	0.62146	72.493	72.174	72.796	0.042114					59	27	3	0	0	0	0.71042	1	6952	6952		44.117	1.6423	1	200220			18895	15211	12737	12746	21841	21841					0.025183159943708233
ISWLKNDQP	9	Unmodified	_ISWLKNDQP_					0	0	0		ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-3|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3089599609375	2	550.790381	1099.56621	-1.156	-0.00063669	3.3306	0.0018344	2.1746	0.0011978	550.792636730012	31.765	0.42544	31.855	31.611	32.037	0.090464					13	9	2	0	0	0	0.20789	1	2145	2145		45.972	9.5255	1	79724			18896	4579	12738	12747	21842	21842					0.02040841471944077
ISYQRLVTRFD	11	Unmodified	_ISYQRLVTRFD_					0	0	0			REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.59014892578125	3	466.589376	1396.7463	-1.2904	-0.00060211	1.103	0.00051463	-0.18748	-8.7477E-05	466.58979194970493	58.349	0.76842	58.383	58.073	58.841	0.033905					65	25	4	0	0	0	0.75121	1	5371	5371		21.78	0	1	414830	+		18897	22893	12739	12748	21843	21843					0.0637952040892742
ITAFFLLTY	9	Unmodified	_ITAFFLLTY_					0	0	0			REV__nc|ENSG00000163110|Q96HC4-5|PDLIM5	REV__nc|ENSG00000163110|Q96HC4-5|PDLIM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.8072509765625	2	544.804968	1087.59538	0.47778	0.0002603	2.8082	0.0015299	3.286	0.0017902	544.8063091278402	25.035	0.58678	24.994	24.644	25.231	-0.04117					29	13	3	0	0	0	0.72402	1	1019	1019		38.806	3.1879	1	69297	+		18898	29980	12740	12749	21844	21844					0.05508985768233288
ITAIDSKK	8	Unmodified	_ITAIDSKK_					0	0	0			REV__nc|ENSG00000170801|P83110-2|HTRA3	REV__nc|ENSG00000170801|P83110-2|HTRA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2646179199219	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.8347	1	2881	2881		23.042	3.6825	1	22029000	+		18899	21688	12741	12750	21845	21845					0.07010669040232642
ITAILRTPE	9	Unmodified	_ITAILRTPE_					0	0	0			REV__ENSG00000213064|ENST00000271375|SFT2D2	REV__ENSG00000213064|ENST00000271375|SFT2D2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.30780029296875	2	507.303124	1012.5917	-0.78767	-0.00039959	-0.33169	-0.00016827	-1.1194	-0.00056786	507.30290719698996	44.608	1.4318	44.574	44.104	45.535	-0.033474					55	32	2	0	0	0	0.20789	1	3528	3528		19.104	3.4617	1	203470	+		18900	23606	12742	12751	21846	21846					0.0859031599438822
ITAKAINEL	9	Unmodified	_ITAKAINEL_					0	0	0			REV__nc|ENSG00000184634|Q93074-3|MED12	REV__nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.7897644042969	2	486.78985	971.565146	0.5341	0.00025999	-0.50217	-0.00024445	0.03193	1.5543E-05	486.78936329822994	33.687	0.96471	33.857	33.314	34.278	0.16971					48	22	3	0	0	0	0.18601	1	2445	2445		76.774	2.7994	1	621090	+		18901	22696	12743	12752	21847	21847					0.07822627103041668
ITAKAINEL	9	Unmodified	_ITAKAINEL_					0	0	0			REV__nc|ENSG00000184634|Q93074-3|MED12	REV__nc|ENSG00000184634|Q93074-3|MED12	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	486.78985	971.565146	0.27976	0.00013618	-1.3998	-0.00068142	-1.1201	-0.00054523	486.788704484466	33.514	0.17273	33.468	33.397	33.57	-0.045815	-0.29725	-0.0004594	NaN	76.774	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39536	+		18902	22696	12743	12752							0.07822627103041668
ITAKILFRHV	10	Unmodified	_ITAKILFRHV_					0	0	0			REV__nc|ENSG00000146414|Q149N8-4|SHPRH	REV__nc|ENSG00000146414|Q149N8-4|SHPRH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.3788452148438	2	599.376958	1196.73936	3.2712	0.0019607	1.8092	0.0010844	5.0805	0.0030451	599.3778849492661	103.51	3.7036	103.46	103.04	106.74	-0.043755					239	88	5	0	0	0	0.8608	1	11445	11445		34.173	1.3601	1	11967000	+		18903	20015	12744	12753	21848	21848					0.14886252319024607
ITARKLPDVQL	11	Unmodified	_ITARKLPDVQL_					0	0	0			REV__ENSG00000162409|ENST00000371244|PRKAA2	REV__ENSG00000162409|ENST00000371244|PRKAA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3842163085938	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.70584	1	12829	12829		30.569	2.4874	1	19815000	+		18904	20812	12745	12754	21849	21849					0.1340560990265658
ITATHEEPG	9	Unmodified	_ITATHEEPG_					0	0	0			REV__ENSG00000101216|ENST00000370077|GMEB2	REV__ENSG00000101216|ENST00000370077|GMEB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.72869873046875	2	477.729989	953.445425	-1.6875	-0.00080617	-1.149	-0.0005489	-2.8365	-0.0013551	477.72927840585464	97.94	1.0527	98.136	97.721	98.773	0.19585					50	23	3	0	0	0	0.78058	1	10140	10140		30.504	1.3541	1	460730	+		18905	17257	12746	12755	21850	21850					-0.03315986241511837
ITATRQED	8	Unmodified	_ITATRQED_					0	0	0			REV__nc|ENSG00000105146|Q9UQB9-3|AURKC	REV__nc|ENSG00000105146|Q9UQB9-3|AURKC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.23553466796875	2	467.235439	932.456324	-1.0177	-0.00047551	-3.5294	-0.001649	-4.5471	-0.0021246	467.2337824408168	68.11	1.4648	68.17	67.783	69.248	0.059288					157	61	4	0	0	0	0.90983	1	6173	6173		42.396	1.8235	1	2841300	+		18906	17510	12747	12756	21851	21851					-0.012605838672357095
ITAVPIASA	9	Unmodified	_ITAVPIASA_					0	0	0			REV__nc|ENSG00000136715|Q9H0E3|SAP130	REV__nc|ENSG00000136715|Q9H0E3|SAP130	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.7515869140625	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.734	1	77.825	77.325	78.325	0.091438								0	0	0	0.30416	1	7271	7271		29.15	1.2673	1		+		18907	29874	12748	12757	21852	21852					0.06383284011508294
ITAVTLES	8	Unmodified	_ITAVTLES_					0	0	0			REV__ENST00000303115.7_1_5:35877801-35877897:+|nuORF	REV__ENST00000303115.7_1_5:35877801-35877897:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.23211669921875	2	417.234376	832.454199	-1.9007	-0.00079304	-3.0583	-0.001276	-4.959	-0.0020691	417.23406411050627	32.902	0.70251	32.955	32.632	33.335	0.05246					59	32	3	0	0	0	0.85277	1	1573	1573		25.45	6.0902	1	130350	+		18908	24792	12749	12758	21853	21853					0.031269873949554494
ITAVVEVGRKH	11	Unmodified	_ITAVVEVGRKH_					0	0	0		ENSG00000188050|ENST00000340112|RNF133	ENSG00000188050|ENST00000340112|RNF133	ENSG00000188050|ENST00000340112|RNF133	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5743713378906	3	403.575178	1207.70371	0.57405	0.00023167	-1.6768	-0.00067673	-1.1028	-0.00044506	403.57443061209773	82.843	3.1803	82.99	82.289	85.469	0.14694					168	73	3	0	0	0	0.67762	1	7949	7949		35.178	1.2566	1	1495300			18909	7900	12750	12759	21854	21854					0.10816170071370834
ITAVVEVGRKH	11	Unmodified	_ITAVVEVGRKH_					0	0	0		ENSG00000188050|ENST00000340112|RNF133	ENSG00000188050|ENST00000340112|RNF133	ENSG00000188050|ENST00000340112|RNF133	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5746154785156	3	403.575178	1207.70371	-1.7546	-0.00070812	0.79854	0.00032227	-0.95608	-0.00038585	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.68431	1	7978	7978		34.087	2.4522	1	1090300			18910	7900	12750	12759	21855	21855					0.10816170071370834
ITAVVEVGRKH	11	Unmodified	_ITAVVEVGRKH_					0	0	0		ENSG00000188050|ENST00000340112|RNF133	ENSG00000188050|ENST00000340112|RNF133	ENSG00000188050|ENST00000340112|RNF133	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5745849609375	3	403.575178	1207.70371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.018	1	81.123	80.623	81.623	0.10527								0	0	0	0.56276	1	7699	7699		30.569	1.0181	1				18911	7900	12750	12759	21856	21856					0.10816170071370834
ITDGSVVVHY	10	Unmodified	_ITDGSVVVHY_					0	0	0			REV__ENSG00000082269|ENST00000418814|FAM135A	REV__ENSG00000082269|ENST00000418814|FAM135A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.2825317382812	2	545.282389	1088.55022	0.081754	4.4579E-05	0.1625	8.8608E-05	0.24425	0.00013319	545.282309491857	51.118	0.98422	51.153	50.765	51.749	0.034584					71	28	4	0	0	0	0.74274	1	4081	4081		42.396	5.3677	1	870180	+		18912	16837	12751	12760	21857	21857					0.009491352350551097
ITDGSVVVHY	10	Unmodified	_ITDGSVVVHY_					0	0	0			REV__ENSG00000082269|ENST00000418814|FAM135A	REV__ENSG00000082269|ENST00000418814|FAM135A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.2816772460938	2	545.282389	1088.55022	-0.16004	-8.7267E-05	0.38298	0.00020883	0.22294	0.00012156	545.2823907735924	51.175	1.0723	51.09	50.768	51.841	-0.084534					70	30	4	0	0	0	0.85934	1	4105	4105		35.618	0	1	1005000	+		18913	16837	12751	12760	21858	21858					0.009491352350551097
ITDHGSLIY	9	Unmodified	_ITDHGSLIY_					0	0	0		nc|ENSG00000132109|P19474-2|TRIM21;ENSG00000132109|ENST00000254436|TRIM21	nc|ENSG00000132109|P19474-2|TRIM21	nc|ENSG00000132109|P19474-2|TRIM21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.76300048828125	2	509.763832	1017.51311	-0.51932	-0.00026473	-0.10698	-5.4536E-05	-0.6263	-0.00031927	509.76358528526174	48.979	0.92498	48.955	48.619	49.544	-0.024033					38	20	3	0	0	0	0.28875	2	4173	4173;4184		65.803	0	1	440250			18914	3763	12752	12761	21859;21860	21859					0.005054636892964481
ITDKNSLAY	9	Unmodified	_ITDKNSLAY_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.7689208984375	2	512.769114	1023.52368	0.15603	8.0008E-05	-0.2552	-0.00013086	-0.099166	-5.0849E-05	512.7688154099643	38.505	0.9453	38.477	38.129	39.074	-0.027843					50	21	3	0	0	0	0.29259	2	2618	2597;2618		65.465	8.7443	1	477320			18915	5811	12753	12762	21861;21862	21862					0.012854463436951846
ITDKNSLAY	9	Unmodified	_ITDKNSLAY_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.7687377929688	2	512.769114	1023.52368	-0.85034	-0.00043603	0.91882	0.00047114	0.068475	3.5112E-05	512.7693435054609	38.406	0.83609	38.356	38.028	38.864	-0.050369					52	18	4	0	0	0	0.16822	4	2691	2670;2679;2691;2703		80.455	21.673	1	590040			18916	5811	12753	12762	21863;21864;21865;21866	21865					0.012854463436951846
ITDKNSLAY	9	Unmodified	_ITDKNSLAY_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.7688598632812	2	512.769114	1023.52368	-1.8226	-0.00093456	1.6802	0.00086156	-0.14236	-7.2998E-05	512.7698417086234	38.338	0.98523	38.349	37.991	38.976	0.011173					59	22	4	0	0	0	0.051853	3	2613	2594;2613;2623		107.01	40.578	1	512150			18917	5811	12753	12762	21867;21868;21869	21868					0.012854463436951846
ITDKNSLAY	9	Unmodified	_ITDKNSLAY_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.7688598632812	2	512.769114	1023.52368	-0.42239	-0.00021659	0.39367	0.00020186	-0.028724	-1.4729E-05	512.7691224162727	38.465	0.72042	38.476	38.195	38.915	0.010708					46	20	3	0	0	0	0.69624	1	2272	2272		40.778	1.972	1	407540			18918	5811	12753	12762	21870	21870					0.012854463436951846
ITDKNSLAY	9	Unmodified	_ITDKNSLAY_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.7678833007812	2	512.769114	1023.52368	0.25179	0.00012911	0.15732	8.067E-05	0.40911	0.00020978	512.7687542382856	38.296	0.6024	38.39	38.087	38.69	0.094322					51	20	4	0	0	0	0.39367	2	2245	2245;2265		58.23	14.113	1	380480			18919	5811	12753	12762	21871;21872	21871					0.012854463436951846
ITDKNSLAY	9	Unmodified	_ITDKNSLAY_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.76904296875	2	512.769114	1023.52368	0.19158	9.8235E-05	-0.31332	-0.00016066	-0.12175	-6.2428E-05	512.7688486938052	38.33	0.59456	38.273	38.038	38.632	-0.057915					40	17	3	0	0	0	0.41566	3	2263	2254;2263;2273		56.721	10.772	1	384660			18920	5811	12753	12762	21873;21874;21875	21874					0.012854463436951846
ITDMYEFLQVR	11	Unmodified	_ITDMYEFLQVR_					0	0	0		ENST00000282541.9_1_3:32207403-32207541:+|nuORF	ENST00000282541.9_1_3:32207403-32207541:+|nuORF	ENST00000282541.9_1_3:32207403-32207541:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.23883056640625	3	472.239355	1413.69624	0.4853	0.00022918	-0.31534	-0.00014891	0.16997	8.0264E-05	472.2391809158307	26.792	0.6008	26.833	26.51	27.111	0.040834					36	18	3	0	0	0	0.76892	1	1172	1172		17.833	0	1	123500			18921	9637	12754	12763	21876	21876					0.005936496887443354
ITDSAGHILY	10	Unmodified	_ITDSAGHILY_					0	0	0		ENSG00000170348|ENST00000303575|TMED10;chr14:75152143-75176649|15|19.87|0.19|6.73|-|0|TMED10,None|1	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.2824096679688	2	545.282389	1088.55022	-0.23571	-0.00012853	0.27829	0.00015175	0.04258	2.3218E-05	545.282415980197	51.035	1.5932	51.033	50.655	52.248	-0.0020447					109	43	4	0	0	0	5.5763E-24	10	4341	4317;4324;4330;4341;4352;4363;4375;4388;4401;4412		177.71	95.402	1	2901800			18922	6578	12755	12764	21877;21878;21879;21880;21881;21882;21883;21884;21885;21886	21880					0.009491352350551097
ITDSAGHILY	10	Unmodified	_ITDSAGHILY_					0	0	0		ENSG00000170348|ENST00000303575|TMED10;chr14:75152143-75176649|15|19.87|0.19|6.73|-|0|TMED10,None|1	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.2822265625	2	545.282389	1088.55022	0.073676	4.0174E-05	-0.045854	-2.5003E-05	0.027822	1.5171E-05	545.2822083486135	51.033	2.1058	51.009	50.553	52.659	-0.023426					133	56	4	0	0	0	5.5763E-24	10	4451	4418;4426;4433;4441;4451;4463;4474;4487;4499;4510		177.71	95.402	1	2515900			18923	6578	12755	12764	21887;21888;21889;21890;21891;21892;21893;21894;21895;21896	21891					0.009491352350551097
ITDSAGHILY	10	Unmodified	_ITDSAGHILY_					0	0	0		ENSG00000170348|ENST00000303575|TMED10;chr14:75152143-75176649|15|19.87|0.19|6.73|-|0|TMED10,None|1	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.2825927734375	2	545.282389	1088.55022	0.3365	0.00018349	-0.21842	-0.0001191	0.11808	6.4388E-05	545.2821272207177	51.057	1.7565	51.065	50.722	52.479	0.0077438					123	48	5	0	0	0	2.5856E-11	9	4368	4355;4363;4368;4377;4389;4401;4413;4425;4478		162.31	80.001	1	2866500			18924	6578	12755	12764	21897;21898;21899;21900;21901;21902;21903;21904;21905	21899					0.009491352350551097
ITDSAGHILY	10	Unmodified	_ITDSAGHILY_					0	0	0		ENSG00000170348|ENST00000303575|TMED10;chr14:75152143-75176649|15|19.87|0.19|6.73|-|0|TMED10,None|1	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.2822265625	2	545.282389	1088.55022	0.081754	4.4579E-05	0.1625	8.8608E-05	0.24425	0.00013319	545.282309491857	51.118	0.98422	51.153	50.765	51.749	0.034584					71	28	4	0	0	0	0.0071309	6	4057	4031;4034;4046;4057;4069;4092		133.81	65.026	1	870180			18925	6578	12755	12764	21906;21907;21908;21909;21910;21911	21909					0.009491352350551097
ITDSAGHILY	10	Unmodified	_ITDSAGHILY_					0	0	0		ENSG00000170348|ENST00000303575|TMED10;chr14:75152143-75176649|15|19.87|0.19|6.73|-|0|TMED10,None|1	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.2818603515625	2	545.282389	1088.55022	0.40007	0.00021815	-0.36851	-0.00020094	0.031558	1.7208E-05	545.281966123205	51.155	1.0609	51.205	50.922	51.983	0.049896					62	32	3	0	0	0	0.017366	5	4072	4040;4049;4061;4072;4082		124.59	53.299	1	1211600			18926	6578	12755	12764	21912;21913;21914;21915;21916	21915					0.009491352350551097
ITDSAGHILY	10	Unmodified	_ITDSAGHILY_					0	0	0		ENSG00000170348|ENST00000303575|TMED10;chr14:75152143-75176649|15|19.87|0.19|6.73|-|0|TMED10,None|1	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.2822875976562	2	545.282389	1088.55022	-0.16004	-8.7267E-05	0.38298	0.00020883	0.22294	0.00012156	545.2823907735924	51.175	1.0723	51.09	50.768	51.841	-0.084534					70	30	4	0	0	0	0.017366	5	4070	4044;4046;4058;4070;4082		124.59	53.299	1	1005000			18927	6578	12755	12764	21917;21918;21919;21920;21921	21920					0.009491352350551097
ITECSIATTAE	11	Unmodified	_ITECSIATTAE_					0	0	0		ENSG00000151150|ENST00000280772|ANK3	ENSG00000151150|ENST00000280772|ANK3	ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.7658081054688	2	569.768454	1137.52235	0.45975	0.00026195	-3.4074	-0.0019414	-2.9476	-0.0016795	569.7664341566348	60.58	0.57011	60.681	60.319	60.889	0.10082					44	24	2	0	0	0	0.66929	1	5233	5233		36.447	1.2947	1	542490			18928	5098	12756	12765	21922	21922					-0.04090555807374585
ITEELRQY	8	Unmodified	_ITEELRQY_					0	0	0		ENST00000460203.1_1_X:14032428-14038575:-|nuORF;ENSG00000046647|ENST00000680255|GEMIN8	ENST00000460203.1_1_X:14032428-14038575:-|nuORF	ENST00000460203.1_1_X:14032428-14038575:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2741088867188	2	526.274564	1050.53457	0.76856	0.00040447	-0.87035	-0.00045804	-0.10179	-5.357E-05	526.2739756029589	55.537	0.74533	55.938	55.614	56.359	0.40101					39	17	3	0	0	0	0.47906	1	5705	5705		76.847	10.417	1	1585300			18929	12004	12757	12766	21923	21923					0.011328487179980584
ITEKLLLCV	9	Unmodified	_ITEKLLLCV_					0	0	0			REV__ENSG00000149346|ENST00000334534|SLX4IP	REV__ENSG00000149346|ENST00000334534|SLX4IP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3134765625	2	516.312103	1030.60965	0.80556	0.00041592	2.4849	0.001283	3.2904	0.0016989	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.78983	1	10662	10662		27.882	2.3082	1	72906000	+		18930	20163	12758	12767	21924	21924					0.09557314924882121
ITEKLLLCV	9	Unmodified	_ITEKLLLCV_					0	0	0			REV__ENSG00000149346|ENST00000334534|SLX4IP	REV__ENSG00000149346|ENST00000334534|SLX4IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.313720703125	2	516.312103	1030.60965	1.791	0.00092474	1.8914	0.00097654	3.6824	0.0019013	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.7932	1	12181	12181		26.693	2.4902	1	24820000	+		18931	20163	12758	12767	21925	21925					0.09557314924882121
ITELEFVQII	10	Unmodified	_ITELEFVQII_					0	0	0		ENSG00000124225|ENST00000341744|PMEPA1	ENSG00000124225|ENST00000341744|PMEPA1	ENSG00000124225|ENST00000341744|PMEPA1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.5665283203125	3	402.232307	1203.67509	-0.40521	-0.00016299	-0.8034	-0.00032315	-1.2086	-0.00048614	402.2318509651482	15.661	0.10523	15.581	15.534	15.639	-0.080017					7	4	2	0	0	0	0.37624	1	45	45		27.047	6.2102	1	15502			18932	3321	12759	12768	21926	21926					0.08140007651581982
ITELEFVQII	10	Unmodified	_ITELEFVQII_					0	0	0		ENSG00000124225|ENST00000341744|PMEPA1	ENSG00000124225|ENST00000341744|PMEPA1	ENSG00000124225|ENST00000341744|PMEPA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	402.232307	1203.67509	2.9695	0.0011944	-4.6267	-0.001861	-1.6572	-0.00066659	402.2301739581745	15.615	0.10033	15.532	15.439	15.54	-0.083363	-0.070765	-0.0031842	NaN	27.047	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15137			18933	3321	12759	12768							0.08140007651581982
ITELEFVQII	10	Unmodified	_ITELEFVQII_					0	0	0		ENSG00000124225|ENST00000341744|PMEPA1	ENSG00000124225|ENST00000341744|PMEPA1	ENSG00000124225|ENST00000341744|PMEPA1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	402.232307	1203.67509	0.012696	5.1066E-06	-1.806	-0.00072642	-1.7933	-0.00072131	402.23123998184013	15.637	0.15215	15.695	15.583	15.736	0.057871	0.092416	0.00021958	NaN	27.047	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14249			18934	3321	12759	12768							0.08140007651581982
ITETGQTKIF	10	Unmodified	_ITETGQTKIF_					0	0	0			REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.3153686523438	2	569.311146	1136.60774	0.30672	0.00017462	-0.37759	-0.00021497	-0.070872	-4.0348E-05	569.3111353367983	38.322	0.50639	38.416	38.087	38.594	0.094322					25	17	2	0	0	0	0.86272	1	2269	2269		24.519	2.5593	1	100260	+		18935	21116	12760	12769	21927	21927					0.044899774406076176
ITETVNLHY	9	Unmodified	_ITETVNLHY_					0	0	0			REV__ENSG00000154265|ENST00000392676|ABCA5	REV__ENSG00000154265|ENST00000392676|ABCA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.2826538085938	2	545.282389	1088.55022	-0.16004	-8.7267E-05	0.38298	0.00020883	0.22294	0.00012156	545.2823907735924	51.175	1.0723	51.09	50.768	51.841	-0.084534					70	30	4	0	0	0	0.38563	1	4094	4094		58.782	0	1	1005000	+		18936	20379	12761	12770	21928	21928					0.009491352350551097
ITEVKKVCV	9	Unmodified	_ITEVKKVCV_					0	0	0		ENST00000225388.8_1_17:27589420-27589522:-|nuORF	ENST00000225388.8_1_17:27589420-27589522:-|nuORF	ENST00000225388.8_1_17:27589420-27589522:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80364990234375	2	509.801903	1017.58925	-0.054339	-2.7702E-05	3.6212	0.0018461	3.5668	0.0018184	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.76255	1	8692	8692		35.618	1.4457	1	2906900			18937	9188	12762	12771	21929	21929					0.08116144265068215
ITEVKKVCV	9	Unmodified	_ITEVKKVCV_					0	0	0		ENST00000225388.8_1_17:27589420-27589522:-|nuORF	ENST00000225388.8_1_17:27589420-27589522:-|nuORF	ENST00000225388.8_1_17:27589420-27589522:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8036804199219	2	509.801903	1017.58925	0.22319	0.00011378	3.3375	0.0017014	3.5607	0.0018152	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.78536	1	8844	8844		29.15	0.89528	1	3453000			18938	9188	12762	12771	21930	21930					0.08116144265068215
ITEVKKVCV	9	Unmodified	_ITEVKKVCV_					0	0	0		ENST00000225388.8_1_17:27589420-27589522:-|nuORF	ENST00000225388.8_1_17:27589420-27589522:-|nuORF	ENST00000225388.8_1_17:27589420-27589522:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7861022949219	2	509.801903	1017.58925	2.1048	0.001073	3.1312	0.0015963	5.236	0.0026693	509.80358979911193	107.78	0.24963	107.89	107.65	107.9	0.10396					10	9	2	0	0	0	0.20789	1	13138	13138		6.7355	0	1	290910			18939	9188	12762	12771	21931	21931					0.08116144265068215
ITFFHRFQAF	10	Unmodified	_ITFFHRFQAF_					0	0	0		ENST00000556422.5_1_14:57052576-57070625:+|nuORF	ENST00000556422.5_1_14:57052576-57070625:+|nuORF	ENST00000556422.5_1_14:57052576-57070625:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.56549072265625	3	438.564502	1312.67168	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.38	1	62.396	61.896	62.896	0.015724								0	0	0	0.45132	1	5439	5439		28.081	0.43757	1				18940	13744	12763	12772	21932	21932					0.027848023882143025
ITFKDLAV	8	Unmodified	_ITFKDLAV_					0	0	0		ENSG00000133619|ENST00000496259|KRBA1	ENSG00000133619|ENST00000496259|KRBA1	ENSG00000133619|ENST00000496259|KRBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.7657470703125	2	453.768386	905.522219	-1.2895	-0.00058512	-3.8536	-0.0017487	-5.1431	-0.0023338	453.7664319671317	42.031	1.3122	42.035	41.619	42.931	0.0043983					83	36	3	0	0	0	0.91977	1	2832	2832		45.952	0	1	708440			18941	3884	12764	12773	21933	21933					0.06567857045604342
ITFPCISDMIK	11	Unmodified	_ITFPCISDMIK_					0	0	0		nc|ENSG00000254087|P07948-2|LYN;ENSG00000254087|ENST00000519728|LYN	nc|ENSG00000254087|P07948-2|LYN	nc|ENSG00000254087|P07948-2|LYN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3271484375	2	634.324885	1266.63522	0.5602	0.00035535	0.025578	1.6225E-05	0.58578	0.00037158	634.3248294256873	59.288	1.3651	59.402	58.945	60.31	0.11396					111	43	4	0	0	0	0.31674	1	5130	5130		71.877	4.3838	1	2141400			18942	8871	12765	12774	21934	21934					0.012564213849600492
ITFQISQTDLF	11	Unmodified	_ITFQISQTDLF_					0	0	0		nc|ENSG00000114062|Q05086-2|UBE3A;ENSG00000114062|ENST00000648336|UBE3A;nc|ENSG00000114062|Q05086|UBE3A	nc|ENSG00000114062|Q05086-2|UBE3A	nc|ENSG00000114062|Q05086-2|UBE3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.231201171875	3	438.230966	1311.67107	1.1558	0.0005065	-2.9076	-0.0012742	-1.7518	-0.00076769	438.2296157874905	28.42	0.82828	28.247	27.846	28.674	-0.17336					56	20	4	0	0	0	0.72892	1	1758	1758		26.75	0.85799	1	583210			18943	2760	12766	12775	21935	21935					0.027699181578555
ITFTSDDEDDI	11	Unmodified	_ITFTSDDEDDI_					0	0	0			REV__nc|ENSG00000117859|Q96SU4-7|OSBPL9	REV__nc|ENSG00000117859|Q96SU4-7|OSBPL9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.525146484375	3	424.182229	1269.52486	2.0588	0.00087329	-2.973	-0.0012611	-0.91419	-0.00038778	424.18091030306755	24.563	1.1102	24.049	23.746	24.856	-0.51365					55	24	3	0	0	0	0.17383	1	1166	1166		21.78	7.0868	1	1457400	+		18944	18284	12767	12776	21936	21936					-0.09912428868688039
ITGAVVLKGP	10	Unmodified	_ITGAVVLKGP_					0	0	0			REV__ENSG00000139974|ENST00000267488|SLC38A6	REV__ENSG00000139974|ENST00000267488|SLC38A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.80169677734375	2	477.80276	953.590967	0.017832	8.52E-06	0.077815	3.718E-05	0.095646	4.57E-05	477.8025245816942	50.458	0.97669	51.21	50.841	51.818	0.75174					48	23	3	0	0	0	0.85981	1	5033	5033		35.152	0	1	1001800	+		18945	19586	12768	12777	21937	21937					0.11231521345325746
ITGFGTFYI	9	Unmodified	_ITGFGTFYI_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.7633361816406	2	509.765843	1017.51713	-0.4431	-0.00022588	-4.2777	-0.0021806	-4.7208	-0.0024065	509.7635757668311	49.02	0.96839	49.02	48.705	49.674	0.00016785					42	21	3	0	0	0	0.51307	1	4116	4116		51.335	3.4199	1	450640	+		18946	22085	12769	12778	21938	21938					0.009075531830035288
ITGFQSSGL	9	Unmodified	_ITGFQSSGL_					0	0	0			REV__ENSG00000214376|ENST00000409977|VSTM5	REV__ENSG00000214376|ENST00000409977|VSTM5	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.24163818359375	2	455.23745	908.460347	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.15	1	32.144	31.644	32.644	-0.0061455								0	0	0	0.28009	1	1807	1807		39.253	0.23134	1		+		18947	23652	12770	12779	21939	21939					0.0024550562649210406
ITGKGPLR	8	Unmodified	_ITGKGPLR_					0	0	0		nc|ENSG00000033011|Q9BT22-2|ALG1;ENSG00000033011|ENST00000262374|ALG1;ENSG00000251287|ENST00000425059|ALG1L2	nc|ENSG00000033011|Q9BT22-2|ALG1	nc|ENSG00000033011|Q9BT22-2|ALG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2696838378906	2	421.266345	840.518136	-0.2944	-0.00012402	0.66296	0.00027928	0.36856	0.00015526	421.266514892719	28.336	0.70004	28.239	28.011	28.711	-0.096947					32	16	3	0	0	0	0.87479	1	1734	1734		30.504	0	1	135680			18948	887	12771	12780	21940	21940					0.0914981234257084
ITGLAARKTT	10	Unmodified	_ITGLAARKTT_					0	0	0		nc|ENSG00000122068|Q96QD9-3|FYTTD1;nc|ENSG00000122068|Q96QD9-2|FYTTD1;ENSG00000122068|ENST00000241502|FYTTD1;nc|ENSG00000122068|Q96QD9-4|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3135986328125	2	516.314023	1030.61349	-1.5618	-0.0008064	2.0676	0.0010675	0.50574	0.00026112	516.315128223729	103.33	1.0546	103.45	103.07	104.12	0.11494					63	26	3	0	0	0	0.86698	1	10868	10868		28.081	0.19925	1	813320			18949	3209	12772	12781	21941	21941					0.09941120742928433
ITGNHTIRILQ	11	Unmodified	_ITGNHTIRILQ_					0	0	0			REV__ENSG00000134256|ENST00000682167|CD101	REV__ENSG00000134256|ENST00000682167|CD101	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5815734863281	3	422.582333	1264.72517	-0.18543	-7.8358E-05	-0.58125	-0.00024563	-0.76668	-0.00032399	422.58203704906714	97.831	3.5899	97.888	96.517	100.11	0.056831					202	83	4	0	0	0	0.72106	1	10393	10393		31.068	8.5066	1	436660	+		18950	19126	12773	12782	21942	21942					0.10339555100085818
ITGVLPYL	8	Unmodified	_ITGVLPYL_					0	0	0			REV__chr14:64454875-64455440|14|27.21|0.09|8.21|+|0|MTHFD1,None|1	REV__chr14:64454875-64455440|14|27.21|0.09|8.21|+|0|MTHFD1,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2607421875	2	438.265479	874.516405	-0.29451	-0.00012907	-4.3477	-0.0019054	-4.6422	-0.0020345	438.26353377141464	45.157	0.64037	45.088	44.938	45.579	-0.068634					23	15	2	0	0	0	0.88915	1	3258	3258		35.201	5.3592	1	109570	+		18951	15602	12774	12783	21943	21943					0.07412758533939723
ITHTGVYLCM	10	Unmodified	_ITHTGVYLCM_					0	0	0		ENSG00000196458|ENST00000360187|ZNF605;nc|ENSG00000196458|Q86T29-2|ZNF605	ENSG00000196458|ENST00000360187|ZNF605	ENSG00000196458|ENST00000360187|ZNF605	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.275146484375	2	569.275195	1136.53584	-1.155	-0.0006575	0.60824	0.00034626	-0.54673	-0.00031124	569.2755945956161	58.672	0.65927	58.659	58.318	58.977	-0.013729					50	23	3	0	0	0	0.81018	1	5363	5363		38.806	4.6336	1	186800			18952	8060	12775	12784	21944	21944					-0.026969765091052977
ITHYILIHYTI	11	Unmodified	_ITHYILIHYTI_					0	0	0			REV__ENST00000370331.5_1_1:93201975-93202140:-|nuORF	REV__ENST00000370331.5_1_1:93201975-93202140:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.93072509765625	3	462.930851	1385.77072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.336	1	22.762	22.262	23.262	-0.57415								0	0	0	0.56276	1	1033	1033		30.569	8.0073	1		+		18953	25652	12776	12785	21945	21945					0.09326780562469139
ITIAGIPQ	8	Unmodified	_ITIAGIPQ_					0	0	0		ENST00000547987.2_1_12:53854819-53861193:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	ENST00000547987.2_1_12:53854819-53861193:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2566833496094	2	406.747453	811.480354	0.18406	7.4864E-05	3.2463	0.0013204	3.4303	0.0013953	406.7487351842293	39.991	0.94934	40.073	39.32	40.269	0.081345					38	24	2	0	0	0	0.4196	1	2437	2437		10.866	0	1	74925			18954	8135	12777	12786	21946	21946					0.06707301357084816
ITIFLGASIIG	11	Unmodified	_ITIFLGASIIG_					0	0	0			REV__ENST00000513200.7_2_5:93800676-93805709:-|nuORF	REV__ENST00000513200.7_2_5:93800676-93805709:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8336181640625	2	552.8368	1103.65905	-0.71064	-0.00039287	-4.0102	-0.002217	-4.7209	-0.0026099	552.8343973070275	84.083	2.0319	84.083	83.586	85.618	0					122	47	3	0	0	0	0.76699	1	7945	7945		18.262	2.6203	1	300740	+		18955	27991	12778	12787	21947	21947					0.1113634620535322
ITIIMLTLN	9	Unmodified	_ITIIMLTLN_					0	0	0		ENSG00000154265|ENST00000392676|ABCA5;nc|ENSG00000154265|Q8WWZ7-2|ABCA5	ENSG00000154265|ENST00000392676|ABCA5	ENSG00000154265|ENST00000392676|ABCA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3143310546875	2	516.312103	1030.60965	0.80556	0.00041592	2.4849	0.001283	3.2904	0.0016989	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.74721	1	10568	10568		37.159	1.5408	1	72906000			18956	5270	12779	12788	21948	21948					0.09557314924882121
ITILDQEP	8	Unmodified	_ITILDQEP_					0	0	0		ENSG00000112818|ENST00000230588|MEP1A	ENSG00000112818|ENST00000230588|MEP1A	ENSG00000112818|ENST00000230588|MEP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7530212402344	2	464.752933	927.491313	0.0037979	1.7651E-06	1.0163	0.00047231	1.0201	0.00047408	464.75343403343453	29.703	0.68134	29.688	29.401	30.082	-0.015167					25	18	2	0	0	0	0.90089	1	1500	1500		39.253	0.23134	1	38113			18957	2684	12780	12789	21949	21949					0.024666589407161155
ITILLNLPE	9	Unmodified	_ITILLNLPE_					0	0	0			REV__nc|ENSG00000123572|Q7Z2Y5-2|NRK	REV__nc|ENSG00000123572|Q7Z2Y5-2|NRK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3145141601562	2	513.3157	1024.61685	0.32644	0.00016757	1.6891	0.00086703	2.0155	0.0010346	513.3163953254575	46.467	0.87729	46.505	46.157	47.034	0.038181					39	23	2	0	0	0	0.78983	1	3403	3403		27.882	2.4321	1	188460	+		18958	18546	12781	12790	21950	21950					0.1055237079692688
ITIMDPEPQES	11	Unmodified	_ITIMDPEPQES_					0	0	0			REV__nc|ENSG00000168918|Q92835-3|INPP5D	REV__nc|ENSG00000168918|Q92835-3|INPP5D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.2964477539062	2	630.294836	1258.57512	0.64029	0.00040357	2.8333	0.0017858	3.4736	0.0021894	630.2965544942194	23.374	0.99222	23.435	23.057	24.05	0.060431					84	35	3	0	0	0	0.60058	1	774	774		44.377	7.9304	1	334210	+		18959	21533	12782	12791	21951	21951					-0.04382597744552186
ITINGISC	8	Unmodified	_ITINGISC_					0	0	0			REV__nc|ENSG00000112414|Q86SQ4-2|ADGRG6	REV__nc|ENSG00000112414|Q86SQ4-2|ADGRG6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	410.7152099609375	2	410.715296	819.416039	-1.8627	-0.00076506	-2.07	-0.00085018	-3.9327	-0.0016152	410.71419972580463	61.685	0.50525	61.793	61.612	62.117	0.10743					28	21	2	0	0	0	0.91977	1	5359	5359		45.952	3.4775	1	252250	+		18960	17945	12783	12792	21952	21952					-0.000892217913587956
ITINYLLG	8	Unmodified	_ITINYLLG_					0	0	0		ENST00000490659.5_1_10:97583001-97604470:+|nuORF;ENST00000371206.6_1_10:97583001-97605437:+|nuORF;nc|ENSG00000138185|P49961-3|ENTPD1;ENSG00000138185|ENST00000371205|ENTPD1;nc|ENSG00000138185|P49961-2|ENTPD1;nc|ENSG00000138185|P49961-6|ENTPD1;nc|ENSG00000138185|P49961-4|ENTPD1;nc|ENSG00000138185|P49961-5|ENTPD1	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.7655334472656	2	453.768386	905.522219	-1.8618	-0.00084484	-4.196	-0.001904	-6.0578	-0.0027489	453.76637939924865	41.209	0.88986	41.209	40.877	41.766	0					61	26	3	0	0	0	0.93786	1	2788	2788		53.351	7.3995	1	304750			18961	4281	12784	12793	21953	21953					0.0656785704561571
ITINYLLG	8	Unmodified	_ITINYLLG_					0	0	0		ENST00000490659.5_1_10:97583001-97604470:+|nuORF;ENST00000371206.6_1_10:97583001-97605437:+|nuORF;nc|ENSG00000138185|P49961-3|ENTPD1;ENSG00000138185|ENST00000371205|ENTPD1;nc|ENSG00000138185|P49961-2|ENTPD1;nc|ENSG00000138185|P49961-6|ENTPD1;nc|ENSG00000138185|P49961-4|ENTPD1;nc|ENSG00000138185|P49961-5|ENTPD1	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.7655334472656	2	453.768386	905.522219	-1.8474	-0.00083831	-4.0327	-0.0018299	-5.8802	-0.0026682	453.76663563247314	42.146	1.7379	42.146	41.766	43.504	0					90	42	4	0	0	0	0.5397	1	2883	2883		73.975	16.163	1	323540			18962	4281	12784	12793	21954	21954					0.0656785704561571
ITINYLLG	8	Unmodified	_ITINYLLG_					0	0	0		ENST00000490659.5_1_10:97583001-97604470:+|nuORF;ENST00000371206.6_1_10:97583001-97605437:+|nuORF;nc|ENSG00000138185|P49961-3|ENTPD1;ENSG00000138185|ENST00000371205|ENTPD1;nc|ENSG00000138185|P49961-2|ENTPD1;nc|ENSG00000138185|P49961-6|ENTPD1;nc|ENSG00000138185|P49961-4|ENTPD1;nc|ENSG00000138185|P49961-5|ENTPD1	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.765869140625	2	453.768386	905.522219	-1.2895	-0.00058512	-3.8536	-0.0017487	-5.1431	-0.0023338	453.7664319671317	42.031	1.3122	42.035	41.619	42.931	0.0043983					83	36	3	0	0	0	0.88944	4	2787	2778;2787;2798;2809		57.811	12.779	1	708440			18963	4281	12784	12793	21955;21956;21957;21958	21956					0.0656785704561571
ITINYLLG	8	Unmodified	_ITINYLLG_					0	0	0		ENST00000490659.5_1_10:97583001-97604470:+|nuORF;ENST00000371206.6_1_10:97583001-97605437:+|nuORF;nc|ENSG00000138185|P49961-3|ENTPD1;ENSG00000138185|ENST00000371205|ENTPD1;nc|ENSG00000138185|P49961-2|ENTPD1;nc|ENSG00000138185|P49961-6|ENTPD1;nc|ENSG00000138185|P49961-4|ENTPD1;nc|ENSG00000138185|P49961-5|ENTPD1	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7645568847656	2	453.768386	905.522219	-2.9662	-0.001346	-3.7536	-0.0017033	-6.7198	-0.0030493	453.7665399652533	40.934	0.48959	41.327	41.065	41.555	0.39209					38	13	4	0	0	0	0.37614	3	3530	3530;3542;3554		88.643	15.391	1	24890000			18964	4281	12784	12793	21959;21960;21961	21959					0.0656785704561571
ITINYLLG	8	Unmodified	_ITINYLLG_					0	0	0		ENST00000490659.5_1_10:97583001-97604470:+|nuORF;ENST00000371206.6_1_10:97583001-97605437:+|nuORF;nc|ENSG00000138185|P49961-3|ENTPD1;ENSG00000138185|ENST00000371205|ENTPD1;nc|ENSG00000138185|P49961-2|ENTPD1;nc|ENSG00000138185|P49961-6|ENTPD1;nc|ENSG00000138185|P49961-4|ENTPD1;nc|ENSG00000138185|P49961-5|ENTPD1	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.76300048828125	2	453.768386	905.522219	-2.8985	-0.0013153	-4.0093	-0.0018193	-6.9079	-0.0031346	453.76655957593965	41.479	1.4103	41.892	41.576	42.987	0.4139					105	36	4	0	0	0	0.3646	6	3650	3609;3638;3650;3662;3674;3688		88.643	30.832	1	7951200			18965	4281	12784	12793	21962;21963;21964;21965;21966;21967	21964					0.0656785704561571
ITINYLLG	8	Unmodified	_ITINYLLG_					0	0	0		ENST00000490659.5_1_10:97583001-97604470:+|nuORF;ENST00000371206.6_1_10:97583001-97605437:+|nuORF;nc|ENSG00000138185|P49961-3|ENTPD1;ENSG00000138185|ENST00000371205|ENTPD1;nc|ENSG00000138185|P49961-2|ENTPD1;nc|ENSG00000138185|P49961-6|ENTPD1;nc|ENSG00000138185|P49961-4|ENTPD1;nc|ENSG00000138185|P49961-5|ENTPD1	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7659912109375	2	453.768386	905.522219	-1.5185	-0.00068905	-3.2881	-0.001492	-4.8066	-0.0021811	453.766963530374	71.765	0.95408	72.149	71.628	72.582	0.38449					69	22	5	0	0	0	0.93786	2	7983	7983;8019		53.351	7.3995	1	869760			18966	4281	12784	12793	21968;21969	21968					0.0656785704561571
ITINYLLG	8	Unmodified	_ITINYLLG_					0	0	0		ENST00000490659.5_1_10:97583001-97604470:+|nuORF;ENST00000371206.6_1_10:97583001-97605437:+|nuORF;nc|ENSG00000138185|P49961-3|ENTPD1;ENSG00000138185|ENST00000371205|ENTPD1;nc|ENSG00000138185|P49961-2|ENTPD1;nc|ENSG00000138185|P49961-6|ENTPD1;nc|ENSG00000138185|P49961-4|ENTPD1;nc|ENSG00000138185|P49961-5|ENTPD1	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7657470703125	2	453.768386	905.522219	-1.7655	-0.00080113	-2.4706	-0.0011211	-4.2361	-0.0019222	453.76702975499904	72.497	1.0303	72.883	72.583	73.613	0.38581					56	24	3	0	0	0	0.47906	4	8114	8090;8102;8114;8125		76.847	8.3619	1	661680			18967	4281	12784	12793	21970;21971;21972;21973	21972					0.0656785704561571
ITINYLLG	8	Unmodified	_ITINYLLG_					0	0	0		ENST00000490659.5_1_10:97583001-97604470:+|nuORF;ENST00000371206.6_1_10:97583001-97605437:+|nuORF;nc|ENSG00000138185|P49961-3|ENTPD1;ENSG00000138185|ENST00000371205|ENTPD1;nc|ENSG00000138185|P49961-2|ENTPD1;nc|ENSG00000138185|P49961-6|ENTPD1;nc|ENSG00000138185|P49961-4|ENTPD1;nc|ENSG00000138185|P49961-5|ENTPD1	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	453.768386	905.522219	-0.012648	-5.7393E-06	-4.5091	-0.0020461	-4.5217	-0.0020518	453.7662871308315	72.342	0.99227	72.892	72.524	73.517	0.55008	0.0046574	-0.001061	NaN	76.847	64	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	747980			18968	4281	12784	12793							0.0656785704561571
ITIPRNLN	8	Unmodified	_ITIPRNLN_					0	0	0			REV__L1MA1_dup4040|chr19:27807049-27807811:+|1.3672237593164838|0.2006977400778447|2.77|63.0|11|2|sense	REV__L1MA1_dup4040|chr19:27807049-27807811:+|1.3672237593164838|0.2006977400778447|2.77|63.0|11|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76885986328125	2	470.782359	939.550165	-0.25401	-0.00011958	3.2522	0.0015311	2.9982	0.0014115	470.7837688612208	52.65	0.4123	53.074	52.807	53.219	0.42348					13	9	2	0	0	0	0.4196	1	5296	5296		53.351	9.2347	1	167520	+		18969	29464	12785	12794	21974	21974					0.0779718002570462
ITISARVKGT	10	Unmodified	_ITISARVKGT_					0	0	0		ENST00000330258.3_2_X:63410065-63410188:-|nuORF	ENST00000330258.3_2_X:63410065-63410188:-|nuORF	ENST00000330258.3_2_X:63410065-63410188:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.30322265625	2	523.321848	1044.62914	-0.041426	-2.1679E-05	1.9598	0.0010256	1.9184	0.0010039	523.3230835336212	87.699	0.21559	87.767	87.616	87.832	0.067711					5	4	2	0	0	0	0.37624	1	8865	8865		35.152	16.049	1	17738			18970	10108	12786	12795	21975	21975					0.10861407259994849
ITIVTSLIP	9	Unmodified	_ITIVTSLIP_					0	0	0			REV__nc|ENSG00000183023|P32418-3|SLC8A1	REV__nc|ENSG00000183023|P32418-3|SLC8A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.8051452636719	2	478.804968	955.595384	0.22693	0.00010865	2.6093	0.0012493	2.8362	0.001358	478.8061448766097	39.22	1.8064	39.308	38.205	40.011	0.088375					88	52	2	0	0	0	0.78536	1	2406	2406		29.15	6.1071	1	295310	+		18971	22568	12787	12796	21976	21976					0.11580985768239316
ITKLHANIW	9	Unmodified	_ITKLHANIW_					0	0	0			REV__ENSG00000114771|ENST00000232892|AADAC	REV__ENSG00000114771|ENST00000232892|AADAC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.821044921875	2	548.319109	1094.62366	1.2688	0.0006957	-2.3561	-0.0012919	-1.0873	-0.00059618	548.3179583134634	109.51	0.28491	109.54	109.43	109.71	0.033089					27	14	2	0	0	0	0.78983	1	12011	12011		27.882	0.83493	1	844490	+		18972	18065	12788	12797	21977	21977					0.0801372846817685
ITKLKTKFPYT	11	Unmodified	_ITKLKTKFPYT_					0	0	0		ENSG00000011405|ENST00000691414|PIK3C2A;nc|ENSG00000011405|O00443-2|PIK3C2A	ENSG00000011405|ENST00000691414|PIK3C2A	ENSG00000011405|ENST00000691414|PIK3C2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	447.2731018066406	3	447.270984	1338.79112	1.5068	0.00067396	2.7747	0.0012411	4.2816	0.001915	447.2721343487067	107.14	1.0643	107.17	106.58	107.65	0.035622					102	24	6	0	0	0	0.75121	1	11736	11736		21.78	1.4654	1	9102100			18973	790	12789	12798	21978	21978					0.1352795122227235
ITKLPSIIVPI	11	Unmodified	_ITKLPSIIVPI_					0	0	0			REV__ENST00000474085.5_1_2:102638602-102644851:+|nuORF	REV__ENST00000474085.5_1_2:102638602-102644851:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.255126953125	2	597.397025	1192.7795	-0.2233	-0.0001334	1.6286	0.00097291	1.4053	0.00083951	597.397735946198	74.243	0.28913	74.634	74.458	74.747	0.3911					8	6	2	0	0	0	0.17839	1	8335	8335		17.468	7.7624	1	90424	+		18974	18131	12790	12799	21979	21979					0.19081754198964518
ITKRERKPAI	10	Unmodified	_ITKRERKPAI_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.5894470214844	3	404.59094	1210.75099	-1.9009	-0.00076907	-3.3646	-0.0013613	-5.2654	-0.0021303	404.9239578033223	40.904	1.2809	40.908	40.545	41.826	0.0043983					58	43	2	0	0	0	0.86802	1	2640	2640		27.047	0.98393	1	259010	+		18975	18072	12791	12800	21980	21980					0.15404449342372573
ITKSRWTLLK	10	Unmodified	_ITKSRWTLLK_					0	0	0			REV__ENST00000276079.12_1_X:70504298-70511637:+|nuORF	REV__ENST00000276079.12_1_X:70504298-70511637:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	623.388671875	2	623.387522	1244.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.86	1	117.79	117.29	118.29	-0.07531								0	0	0	0.45132	1	12648	12648		14.137	0	1		+		18976	24575	12792	12801	21981	21981					0.14790217627887614
ITKTFDKRRD	10	Unmodified	_ITKTFDKRRD_					0	0	0		ENST00000360864.8_1_20:62564729-62564939:+|nuORF	ENST00000360864.8_1_20:62564729-62564939:+|nuORF	ENST00000360864.8_1_20:62564729-62564939:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3568725585938	2	640.359493	1278.70443	-1.1585	-0.00074183	0.10064	6.4446E-05	-1.0578	-0.00067738	640.3594398218631	99.341	2.5092	99.527	98.68	101.19	0.18581					187	58	4	0	0	0	0.80179	1	10241	10241		39.253	0.49923	1	585260			18977	10459	12793	12802	21982	21982					0.07622964720417258
ITKTFDKRRD	10	Unmodified	_ITKTFDKRRD_					0	0	0		ENST00000360864.8_1_20:62564729-62564939:+|nuORF	ENST00000360864.8_1_20:62564729-62564939:+|nuORF	ENST00000360864.8_1_20:62564729-62564939:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3579711914062	2	640.359493	1278.70443	1.5776	0.0010102	-2.6144	-0.0016742	-1.0368	-0.00066394	640.3576428069522	98.956	2.793	99.317	98.237	101.03	0.36136					173	69	3	0	0	0	0.8608	1	11941	11941		34.173	0.25091	1	1011800			18978	10459	12793	12802	21983	21983					0.07622964720417258
ITKTIKLKI	9	Unmodified	_ITKTIKLKI_					0	0	0			REV__nc|ENSG00000147548|Q9BZ95-4|NSD3	REV__nc|ENSG00000147548|Q9BZ95-4|NSD3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	529.3717041015625	2	529.37081	1056.72707	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.91	1	111.91	111.41	112.41	0								0	0	0	0.36178	1	11628	11628		6.3127	2.3274	1		+		18979	20075	12794	12803	21984	21984					0.2009721585598072
ITLEPRSPKPK	11	Unmodified	_ITLEPRSPKPK_					0	0	0			REV__nc|ENSG00000135317|Q9Y5W7-2|SNX14	REV__nc|ENSG00000135317|Q9Y5W7-2|SNX14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.59222412109375	3	422.590717	1264.75032	1.3012	0.00054986	3.2682	0.0013811	4.5693	0.001931	422.59197853531197	58.619	1.7414	58.653	57.951	59.692	0.033905					114	50	3	0	0	0	0.75779	1	5456	5456		20.315	1.784	1	112420	+		18980	29863	12795	12804	21985	21985					0.12853609902640528
ITLILATDMA	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))ITLILATDMA_					1	0	0		ENST00000466472.1_1_21:44185493-44188444:+|nuORF;nc|ENSG00000160191|O76083-12|PDE9A;nc|ENSG00000160191|O76083-15|PDE9A;nc|ENSG00000160191|O76083-14|PDE9A;nc|ENSG00000160191|O76083-5|PDE9A;nc|ENSG00000160191|O76083-2|PDE9A;nc|ENSG00000160191|O76083-13|PDE9A;nc|ENSG00000160191|O76083-8|PDE9A;nc|ENSG00000160191|O76083-6|PDE9A;ENST00000470987.5_1_21:44117526-44195400:+|nuORF;nc|ENSG00000160191|O76083-10|PDE9A;nc|ENSG00000160191|O76083-16|PDE9A;nc|ENSG00000160191|O76083-3|PDE9A;nc|ENSG00000160191|O76083-4|PDE9A;nc|ENSG00000160191|O76083-11|PDE9A;nc|ENSG00000160191|O76083-9|PDE9A;ENST00000489319.5_1_21:44178904-44195400:+|nuORF;nc|ENSG00000160191|O76083-7|PDE9A;ENSG00000160191|ENST00000291539|PDE9A	ENST00000466472.1_1_21:44185493-44188444:+|nuORF	ENST00000466472.1_1_21:44185493-44188444:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3060302734375	2	552.304475	1102.5944	0.78015	0.00043088	2.7293	0.0015074	3.5094	0.0019383	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.74274	2	9497	9497;9533		42.396	6.7778	1	1841700			18981	5561	12796	12805	21986;21987	21986					0.047204033370235265
ITLIPLSMN	9	Unmodified	_ITLIPLSMN_					0	0	0		nc|ENSG00000080839|P28749-2|RBL1;ENSG00000080839|ENST00000373664|RBL1	nc|ENSG00000080839|P28749-2|RBL1	nc|ENSG00000080839|P28749-2|RBL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2902526855469	2	501.288628	1000.5627	-0.064942	-3.2555E-05	3.6163	0.0018128	3.5513	0.0017802	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.78983	1	8566	8566		27.882	1.1893	1	2854100			18982	1453	12797	12806	21988	21988					0.06244455373735036
ITLKHFCY	8	Unmodified	_ITLKHFCY_					0	0	0		ENST00000372876.1_1_6:42712424-42712766:-|nuORF	ENST00000372876.1_1_6:42712424-42712766:-|nuORF	ENST00000372876.1_1_6:42712424-42712766:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.769775390625	2	512.767863	1023.52117	-0.42239	-0.00021659	2.8338	0.0014531	2.4114	0.0012365	512.7691224162727	38.465	0.72042	38.476	38.195	38.915	0.010708					46	20	3	0	0	0	0.92457	1	2290	2290		47.916	0.25827	1	407540			18983	10721	12798	12807	21989	21989					0.010353194050594539
ITLKVKLRKSH	11	Unmodified	_ITLKVKLRKSH_					0	0	0			REV__ENST00000478160.1_1_3:160945095-160953023:+|nuORF	REV__ENST00000478160.1_1_3:160945095-160953023:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.6260681152344	3	441.625873	1321.85579	0.0213	9.4066E-06	0.33286	0.000147	0.35416	0.0001564	441.62594266527384	15.526	0.26368	15.584	15.437	15.7	0.057872					17	7	3	0	0	0	0.31611	1	37	37		72.096	41.527	1	244120	+		18984	21564	12799	12808	21990	21990					0.20773570818937515
ITLKVKLRKSH	11	Unmodified	_ITLKVKLRKSH_					0	0	0			REV__ENST00000478160.1_1_3:160945095-160953023:+|nuORF	REV__ENST00000478160.1_1_3:160945095-160953023:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	441.625873	1321.85579	-2.164	-0.0009557	1.9998	0.00088315	-0.16428	-7.2549E-05	441.62692793811306	15.421	0.14489	15.421	15.356	15.5	0	0.014094	0.0019629	NaN	72.096	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39137	+		18985	21564	12799	12808							0.20773570818937515
ITLLEGVIV	9	Unmodified	_ITLLEGVIV_					0	0	0		ENSG00000151553|ENST00000369248|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8056335449219	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.781	1	42.751	42.251	43.251	-0.029461								0	0	0	0.32159	1	3218	3218		23.042	0	1				18986	5125	12800	12809	21991	21991					0.11580985768250684
ITLLEGVIV	9	Unmodified	_ITLLEGVIV_					0	0	0		ENSG00000151553|ENST00000369248|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8062744140625	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.505	1	39.452	38.952	39.952	-0.052731								0	0	0	0.2969	1	2426	2426		31.955	0	1				18987	5125	12800	12809	21992	21992					0.11580985768250684
ITLLGMPVN	9	Unmodified	_ITLLGMPVN_					0	0	0			REV__ENSG00000150760|ENST00000623213|DOCK1	REV__ENSG00000150760|ENST00000623213|DOCK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2774658203125	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.67345	1	9703	9703		42.396	3.1433	1	5642300	+		18988	20220	12801	12810	21993	21993					0.05648186202256511
ITLLIFKL	8	Unmodified	_ITLLIFKL_					0	0	0			REV__ENST00000296530.12_1_4:159093631-159093787:-|nuORF	REV__ENST00000296530.12_1_4:159093631-159093787:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8009948730469	2	480.828246	959.64194	-1.6774	-0.00080654	0.057799	2.7791E-05	-1.6196	-0.00077875	480.8283664156592	94.969	0.32407	95.171	95.069	95.393	0.20242					10	7	2	0	0	0	0.4196	1	9652	9652		18.324	0	1	44713	+		18989	24715	12802	12811	21994	21994					0.16050470390189275
ITLLKDSIKY	10	Unmodified	_ITLLKDSIKY_					0	0	0		ENSG00000133687|ENST00000539277|TMTC1;nc|ENSG00000133687|Q8IUR5-2|TMTC1;nc|ENSG00000133687|Q8IUR5-1|TMTC1;nc|ENSG00000133687|Q8IUR5-3|TMTC1;ENST00000553189.5_1_12:29689066-29935873:-|nuORF	ENSG00000133687|ENST00000539277|TMTC1;ENST00000553189.5_1_12:29689066-29935873:-|nuORF	ENSG00000133687|ENST00000539277|TMTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.3632202148438	2	597.360639	1192.70673	-0.45682	-0.00027289	-3.5287	-0.0021079	-3.9855	-0.0023808	597.3582006630761	100.19	3.2446	100.23	98.977	102.22	0.046349					174	76	4	0	0	0	0.86763	1	10844	10844		26.693	0.62953	1	4145900			18990	3888;13695	12803	12812	21995	21995					0.11808000405494568
ITLLPPSLLIQ	11	Unmodified	_ITLLPPSLLIQ_					0	0	0			REV__ENST00000569682.5_1_15:30871505-30892352:+|nuORF	REV__ENST00000569682.5_1_15:30871505-30892352:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.366455078125	2	604.386657	1206.75876	-0.16909	-0.00010219	-0.92391	-0.0005584	-1.093	-0.00066059	604.3853444852977	104.9	0.32904	104.9	104.62	104.95	0					11	7	2	0	0	0	0.17295	1	10795	10795		36.447	0	1	297600	+		18991	26179	12804	12813	21996	21996					0.16365163819295958
ITLLRDLM	8	Unmodified	_ITLLRDLM_					0	0	0		ENSG00000236699|ENST00000420470|ARHGEF38	ENSG00000236699|ENST00000420470|ARHGEF38	ENSG00000236699|ENST00000420470|ARHGEF38	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7904357910156	2	487.788795	973.563038	-0.48923	-0.00023864	4.277	0.0020863	3.7878	0.0018476	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.86288	1	9733	9733		26.796	1.3459	1	1599600			18992	8756	12805	12814	21997	21997					0.07519875093578321
ITLPKLGP	8	Unmodified	_ITLPKLGP_					0	0	0			REV__ENST00000380319.2_1_X:15768116-15782978:+|nuORF	REV__ENST00000380319.2_1_X:15768116-15782978:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.77484130859375	2	419.773471	837.53239	-0.10078	-4.2304E-05	4.0424	0.0016969	3.9416	0.0016546	419.7750685002772	52.128	2.0035	52.125	51.055	53.058	-0.0020447					75	49	2	0	0	0	0.90465	1	4500	4500		40.573	5.3719	1	171040	+		18993	25946	12806	12815	21998	21998					0.10712464770858787
ITLPLSCVAMV	11	Unmodified	_ITLPLSCVAMV_					0	0	0			REV__ENSG00000160013|ENST00000291294|PTGIR	REV__ENSG00000160013|ENST00000291294|PTGIR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	573.8167114257812	2	573.816696	1145.61884	-1.3052	-0.00074896	1.8249	0.0010472	0.51968	0.0002982	573.817608790497	36.135	0.93153	36.135	35.803	36.734	0					60	22	4	0	0	0	0.64498	1	2093	2093		39.253	2.8061	1	769810	+		18994	20689	12807	12816	21999	21999					0.05185340218872625
ITLPVLAPEV	10	Unmodified	_ITLPVLAPEV_					0	0	0		ENSG00000174951|ENST00000645652|FUT1	ENSG00000174951|ENST00000645652|FUT1	ENSG00000174951|ENST00000645652|FUT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.3797607421875	2	526.323525	1050.6325	0.086674	4.5619E-05	-4.039	-0.0021258	-3.9523	-0.0020802	526.8247143477494	83.589	0.25417	84.024	83.96	84.214	0.43538					7	5	2	0	0	0	0.37624	1	9707	9707		25.574	0	1	52156			18995	6977	12808	12817	22000	22000					0.10920657313999982
ITLPVLAPEV	10	Unmodified	_ITLPVLAPEV_					0	0	0		ENSG00000174951|ENST00000645652|FUT1	ENSG00000174951|ENST00000645652|FUT1	ENSG00000174951|ENST00000645652|FUT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2741088867188	2	526.323525	1050.6325	0.42385	0.00022308	2.4282	0.001278	2.852	0.0015011	526.3245096611561	55.629	0.8739	56.197	55.489	56.363	0.56836					35	20	2	0	0	0	0.37624	1	5700	5700		44.117	8.4985	1	214980			18996	6977	12808	12817	22001	22001					0.10920657313999982
ITLSIHQSVEN	11	Unmodified	_ITLSIHQSVEN_					0	0	0		ENST00000478631.6_2_1:53460811-53461279:+|nuORF	ENST00000478631.6_2_1:53460811-53461279:+|nuORF	ENST00000478631.6_2_1:53460811-53461279:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.3352661132812	2	620.830234	1239.64592	-0.51033	-0.00031683	3.0637	0.001902	2.5534	0.0015852	620.8322011425744	61.29	0.6341	61.679	61.505	62.139	0.38945					46	16	4	0	0	0	0.11202	1	6525	6525		90.601	2.9044	1	633710			18997	12395	12809	12818	22002	22002					0.035678633553061445
ITLSPIKCV	9	Unmodified	_ITLSPIKCV_					0	0	0			REV__ENSG00000261210|ENST00000636231|CLEC19A	REV__ENSG00000261210|ENST00000636231|CLEC19A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.2928466796875	2	487.291171	972.567789	1.5746	0.00076728	2.5881	0.0012611	4.1627	0.0020284	487.2923164445536	91.172	2.4399	91.105	90.562	93.002	-0.067093					137	58	3	0	0	0	0.78058	1	9577	9577		30.504	4.9296	1	2352400	+		18998	23942	12810	12819	22003	22003					0.08040759236348549
ITLSQIARDS	10	Unmodified	_ITLSQIARDS_					0	0	0			REV__ENSG00000118193|ENST00000367350|KIF14	REV__ENSG00000118193|ENST00000367350|KIF14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3063354492188	2	552.306395	1102.59824	-0.5921	-0.00032702	0.79388	0.00043846	0.20178	0.00011145	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.8545	1	9249	9249		36.447	0.82846	1	1102700	+		18999	18294	12811	12820	22004	22004					0.05104209155092576
ITLTQNQKN	9	Unmodified	_ITLTQNQKN_					0	0	0			REV__ENST00000436135.1_1_1:158493653-158493989:+|nuORF	REV__ENST00000436135.1_1_1:158493653-158493989:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.293212890625	2	530.293288	1058.57202	-0.034361	-1.8221E-05	0.31371	0.00016636	0.27935	0.00014814	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.48102	1	9233	9233		52.937	3.4952	1	1852900	+		19000	26688	12812	12821	22005	22005					0.04507939983614051
ITLTQNQKN	9	Unmodified	_ITLTQNQKN_					0	0	0			REV__ENST00000436135.1_1_1:158493653-158493989:+|nuORF	REV__ENST00000436135.1_1_1:158493653-158493989:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2927856445312	2	530.293288	1058.57202	-1.2396	-0.00065735	1.1575	0.00061382	-0.082084	-4.3529E-05	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.67345	1	10867	10867		42.396	3.1433	1	1818700	+		19001	26688	12812	12821	22006	22006					0.04507939983614051
ITLWPHCTD	9	Unmodified	_ITLWPHCTD_					0	0	0			REV__nc|ENSG00000186628|A1L4K1-2|FSD2	REV__nc|ENSG00000186628|A1L4K1-2|FSD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2542724609375	2	543.257859	1084.50117	-1.4281	-0.00077585	-2.2952	-0.0012469	-3.7234	-0.0020228	543.2566042477043	29.448	0.69127	29.419	29.127	29.818	-0.029207					31	15	3	0	0	0	0.62081	1	1853	1853		45.952	3.5558	1	194910	+		19002	22869	12813	12822	22007	22007					-0.037704763255760554
ITNIYQAM	8	Oxidation (M)	_ITNIYQAM(Oxidation (M))_		ITNIYQAM(1)		ITNIYQAM(74)	0	0	1			REV__nc|ENSG00000163395|Q86VF2|IGFN1	REV__nc|ENSG00000163395|Q86VF2|IGFN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2355651855469	2	485.239135	968.463718	0.24887	0.00012076	-3.8789	-0.0018822	-3.63	-0.0017614	485.2370223529383	77.388	1.7116	77.793	77.425	79.137	0.40531					96	40	4	0	0	0	0.53378	1	8916	8916		74.255	7.8258	1	1559200	+		19003	20911	12814	12823	22008	22008		311			-0.02177567591161278
ITPPVLVDIN	10	Unmodified	_ITPPVLVDIN_					0	0	0			REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8184814453125	2	540.818607	1079.62266	0.098678	5.3367E-05	-0.043549	-2.3552E-05	0.05513	2.9815E-05	540.8184275670533	56.473	0.6984	57.033	56.703	57.401	0.55954					42	15	3	0	0	0	0.2953	1	5835	5835		72.879	12.948	1	1990900	+		19004	19793	12815	12824	22009	22009					0.08603469308627609
ITQGRRVTV	9	Unmodified	_ITQGRRVTV_					0	0	0		ENST00000575604.1_1_16:2983808-2987136:+|nuORF;nc|ENSG00000059122|Q4VC44-4|FLYWCH1;nc|ENSG00000059122|Q4VC44-2|FLYWCH1;ENSG00000059122|ENST00000253928|FLYWCH1;nc|ENSG00000059122|Q4VC44-3|FLYWCH1	ENST00000575604.1_1_16:2983808-2987136:+|nuORF	ENST00000575604.1_1_16:2983808-2987136:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3095703125	2	515.311815	1028.60908	-0.66357	-0.00034194	-3.4853	-0.001796	-4.1489	-0.002138	515.3099504894494	58.588	1.2483	58.98	58.194	59.443	0.39209					90	29	4	0	0	0	0.29259	1	6098	6098		65.465	10.689	1	3770900			19005	1050	12816	12825	22010	22010					0.09591656320026232
ITQIPTPFNVE	11	Unmodified	_ITQIPTPFNVE_					0	0	0			REV__nc|ENSG00000013288|Q9Y2E5-2|MAN2B2	REV__nc|ENSG00000013288|Q9Y2E5-2|MAN2B2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.22265625	3	420.227444	1257.6605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.111	1	75.199	74.699	75.699	0.087631								0	0	0	0.56276	1	6943	6943		29.245	4.1772	1		+		19006	29675	12817	12826	22011	22011					0.04197935503384542
ITQTGYCFILV	11	Unmodified	_ITQTGYCFILV_					0	0	0			REV__ENST00000374767.4_1_9:107510045-107513286:+|nuORF	REV__ENST00000374767.4_1_9:107510045-107513286:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	629.8321533203125	2	629.331024	1256.6475	-0.7633	-0.00048037	-2.2126	-0.0013924	-2.9759	-0.0018728	629.3290344797032	58.913	1.2382	59.305	58.736	59.974	0.39209					52	29	3	0	0	0	0.51007	1	6183	6183		51.193	3.2332	1	591130	+		19007	25793	12818	12827	22012	22012					0.029437811196658004
ITQTGYCFILV	11	Unmodified	_ITQTGYCFILV_					0	0	0			REV__ENST00000374767.4_1_9:107510045-107513286:+|nuORF	REV__ENST00000374767.4_1_9:107510045-107513286:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	629.331024	1256.6475	-0.7633	-0.00048037	-2.2126	-0.0013924	-2.9759	-0.0018728	629.3290344797032	58.913	1.2382	59.305	58.736	59.974	0.39209	-0.00049225	0.0010786	NaN	51.193	52	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	591130	+		19008	25793	12818	12827							0.029437811196658004
ITQTGYCFILV	11	Unmodified	_ITQTGYCFILV_					0	0	0			REV__ENST00000374767.4_1_9:107510045-107513286:+|nuORF	REV__ENST00000374767.4_1_9:107510045-107513286:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	629.331024	1256.6475	0.80599	0.00050724	-3.9011	-0.0024551	-3.0951	-0.0019478	629.3280734388226	58.753	1.1249	59.306	58.718	59.843	0.55323	0.00049225	-0.0010467	NaN	51.193	43	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	441000	+		19009	25793	12818	12827							0.029437811196658004
ITRAQLQRRYE	11	Unmodified	_ITRAQLQRRYE_					0	0	0			REV__ENSG00000148798|ENST00000369849|INA	REV__ENSG00000148798|ENST00000369849|INA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.6023864746094	3	478.603908	1432.78989	-0.62309	-0.00029821	-0.09093	-4.3519E-05	-0.71402	-0.00034173	478.60400508239985	15.885	0.2322	15.801	15.708	15.94	-0.083363					18	9	3	0	0	0	0.75121	1	95	95		21.78	4.6137	1	138840	+		19010	20137	12819	12828	22013	22013					0.09081129906098795
ITREAISRVC	10	Unmodified	_ITREAISRVC_					0	0	0		nc|ENSG00000148082|Q92529-2|SHC3;ENSG00000148082|ENST00000375835|SHC3	nc|ENSG00000148082|Q92529-2|SHC3	nc|ENSG00000148082|Q92529-2|SHC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3192749023438	2	574.31624	1146.61793	2.1223	0.0012189	3.467	0.0019912	5.5894	0.0032101	574.3181422905453	94.479	4.1031	94.419	93.372	97.475	-0.059204					230	96	5	0	0	0	0.8545	1	10050	10050		36.447	1.2947	1	1734300			19011	4933	12820	12829	22014	22014					0.05048261894216921
ITRHKHLASE	10	Unmodified	_ITRHKHLASE_					0	0	0			REV__ENSG00000140836|ENST00000268489|ZFHX3	REV__ENSG00000140836|ENST00000268489|ZFHX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.3331298828125	2	596.333279	1190.652	-1.3013	-0.00077598	0.61641	0.00036758	-0.68485	-0.0004084	596.3335316328556	96.129	3.5172	96.331	95.353	98.87	0.20242					227	81	4	0	0	0	0.86587	1	9891	9891		29.17	0	1	1353000	+		19012	15640	12821	12830	22015	22015					0.0643042637743747
ITRIKFDM	8	Oxidation (M)	_ITRIKFDM(Oxidation (M))_		ITRIKFDM(1)		ITRIKFDM(71)	0	0	1			REV__ENST00000342609.6_1_2:191857981-191858245:-|nuORF	REV__ENST00000342609.6_1_2:191857981-191858245:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.285888671875	2	520.283877	1038.5532	4.2533	0.0022129	-3.7588	-0.0019556	0.49455	0.0002573	520.2817801123335	106.28	1.0298	106.43	105.7	106.73	0.14929					95	41	3	0	0	0	0.60357	1	12991	12991		71.296	7.9894	1	379470	+		19013	25277	12822	12831	22016	22016		392			0.03546687088191902
ITRIKFDM	8	Oxidation (M)	_ITRIKFDM(Oxidation (M))_					0	0	1			REV__ENST00000342609.6_1_2:191857981-191858245:-|nuORF	REV__ENST00000342609.6_1_2:191857981-191858245:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	520.283877	1038.5532	2.3794	0.0012379	-2.2283	-0.0011594	0.151	7.8565E-05	520.2826333873985	106.28	1.357	106.4	105.79	107.15	0.12742	-0.012471	0.00098562	NaN	71.296	113	54	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310430	+		19014	25277	12822	12831				392			0.03546687088191902
ITRIKFDM	8	Oxidation (M)	_ITRIKFDM(Oxidation (M))_					0	0	1			REV__ENST00000342609.6_1_2:191857981-191858245:-|nuORF	REV__ENST00000342609.6_1_2:191857981-191858245:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	520.283877	1038.5532	4.2533	0.0022129	-3.7588	-0.0019556	0.49455	0.0002573	520.2817801123335	106.28	1.0298	106.43	105.7	106.73	0.14929	0.012471	-0.00060688	NaN	71.296	95	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	379470	+		19015	25277	12822	12831				392			0.03546687088191902
ITRIRFLSVF	10	Unmodified	_ITRIRFLSVF_					0	0	0			REV__ENSG00000155760|ENST00000286201|FZD7;REV__ENSG00000180340|ENST00000315323|FZD2	REV__ENSG00000180340|ENST00000315323|FZD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3796997070312	2	626.38224	1250.74993	-0.052383	-3.2812E-05	-4.1508	-0.0026	-4.2031	-0.0026328	626.37951872247	106.01	2.3248	106.01	105.2	107.53	0					262	53	6	0	0	0	0.78666	1	11132	11132		40.058	1.3046	1	37510000	+		19016	20444;22391	12823	12832	22017	22017					0.13458234973427352
ITRKGPALPRL	11	Unmodified	_ITRKGPALPRL_					0	0	0			REV__ENST00000467897.2_1_7:27168846-27192162:-|nuORF	REV__ENST00000467897.2_1_7:27168846-27192162:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.934326171875	3	407.931185	1220.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.8	1	115.76	115.26	116.26	-0.037872								0	0	0	0.56276	1	13918	13918		20.315	1.784	1		+		19017	27170	12824	12833	22018	22018					0.1701703972200903
ITRNLPLQNSL	11	Unmodified	_ITRNLPLQNSL_					0	0	0			REV__ENSG00000130035|ENST00000252318|GALNT8	REV__ENSG00000130035|ENST00000252318|GALNT8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8926391601562	2	634.869694	1267.72483	-0.13408	-8.5123E-05	-2.8334	-0.0017989	-2.9675	-0.001884	634.8684076316828	105.7	0.24851	105.68	105.49	105.74	-0.025146					6	5	2	0	0	0	0.16675	1	11433	11433		40.058	0	1	92331	+		19018	18841	12825	12834	22019	22019					0.10168135380240528
ITRTKQLAS	9	Unmodified	_ITRTKQLAS_					0	0	0		ENST00000415522.1_1_X:22454332-22454536:+|nuORF	ENST00000415522.1_1_X:22454332-22454536:+|nuORF	ENST00000415522.1_1_X:22454332-22454536:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.3061828613281	2	509.306198	1016.59784	-0.37346	-0.00019021	-0.31642	-0.00016116	-0.68989	-0.00035136	509.30591642174505	92.904	1.3737	93.13	92.62	93.993	0.22547					101	32	4	0	0	0	0.76764	1	9469	9469		34.173	1.3601	1	2213400			19019	11379	12826	12835	22020	22020					0.09020834225884755
ITSARRIAS	9	Unmodified	_ITSARRIAS_					0	0	0			REV__ENSG00000198523|ENST00000357525|PLN	REV__ENSG00000198523|ENST00000357525|PLN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79052734375	2	487.790715	973.566878	-1.3135	-0.00064074	1.1066	0.00053979	-0.20694	-0.00010094	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.77696	1	8597	8597		31.53	4.7337	1	2239000	+		19020	23335	12827	12836	22021	22021					0.07903680911658739
ITSGILGIAYV	11	Unmodified	_ITSGILGIAYV_					0	0	0			REV__ENSG00000196119|ENST00000284287|OR8A1	REV__ENSG00000196119|ENST00000284287|OR8A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8292236328125	2	553.826432	1105.63831	3.3341	0.0018465	3.5614	0.0019724	6.8955	0.0038189	553.8282134205963	102.58	0.81242	102.53	102.22	103.03	-0.047005					43	19	3	0	0	0	0.60283	1	11232	11232		44.117	14.967	1	563570	+		19021	23092	12828	12837	22022	22022					0.08971755825632499
ITSGILGIAYV	11	Unmodified	_ITSGILGIAYV_					0	0	0			REV__ENSG00000196119|ENST00000284287|OR8A1	REV__ENSG00000196119|ENST00000284287|OR8A1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	553.826432	1105.63831	0.29912	0.00016566	6.7691	0.0037489	7.0682	0.0039146	553.8300566957491	102.35	0.6834	102.54	102.25	102.94	0.19484	-0.031418	0.0006387	NaN	44.117	39	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	507320	+		19022	23092	12828	12837							0.08971755825632499
ITSILQVVFTG	11	Unmodified	_ITSILQVVFTG_					0	0	0			REV__nc|ENSG00000070961|P20020-6|ATP2B1	REV__nc|ENSG00000070961|P20020-6|ATP2B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3433227539062	2	589.344989	1176.67542	-0.36759	-0.00021664	-3.0824	-0.0018166	-3.45	-0.0020332	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.70737	1	9620	9620		30.318	1.1477	1	11103000	+		19023	29708	12829	12838	22023	22023					0.09415427371436635
ITSILQVVFTG	11	Unmodified	_ITSILQVVFTG_					0	0	0			REV__nc|ENSG00000070961|P20020-6|ATP2B1	REV__nc|ENSG00000070961|P20020-6|ATP2B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3423461914062	2	589.344989	1176.67542	0.82336	0.00048524	-4.2828	-0.002524	-3.4594	-0.0020388	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.67778	1	11123	11123		35.152	0.97948	1	9460500	+		19024	29708	12829	12838	22024	22024					0.09415427371436635
ITSKKKEQV	9	Unmodified	_ITSKKKEQV_					0	0	0			REV__nc|ENSG00000138834|Q9UPT6|MAPK8IP3	REV__nc|ENSG00000138834|Q9UPT6|MAPK8IP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.8202514648438	2	530.821681	1059.62881	0.64608	0.00034295	-2.2244	-0.0011807	-1.5783	-0.00083778	530.820506018963	80.205	1.3856	80.261	79.781	81.166	0.055916					85	34	3	0	0	0	0.76764	1	8011	8011		34.173	6.2903	1	627060	+		19025	19512	12830	12839	22025	22025					0.10137987540133508
ITSLLAYRAY	10	Unmodified	_ITSLLAYRAY_					0	0	0		nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR;ENSG00000163946|ENST00000683822|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	586.3326416015625	2	585.829506	1169.64446	-0.75039	-0.0004396	1.9492	0.0011419	1.1988	0.00070232	585.8305676475687	57.715	1.3345	57.701	57.24	58.574	-0.013641					81	46	2	0	0	0	0.86589	1	5189	5189		29.15	6.1071	1	146910			19026	5890	12831	12840	22026	22026					0.06642274057185205
ITSLLPVYV	9	Unmodified	_ITSLLPVYV_					0	0	0			REV__ENST00000589472.5_1_13:33854604-33855228:+|nuORF	REV__ENST00000589472.5_1_13:33854604-33855228:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.7828063964844	2	502.804968	1003.59538	0.3806	0.00019137	-3.6285	-0.0018244	-3.2479	-0.0016331	502.8025971424376	62.274	0.39021	62.828	62.603	62.993	0.5545					13	8	2	0	0	0	0.20789	1	6705	6705		38.806	8.3025	1	40201	+		19027	29161	12832	12841	22027	22027					0.09372985768231956
ITSQEKEITI	10	Unmodified	_ITSQEKEITI_					0	0	0		nc|ENSG00000183023|P32418-2|SLC8A1;nc|ENSG00000183023|P32418-3|SLC8A1;nc|ENSG00000183023|P32418-4|SLC8A1;nc|ENSG00000183023|P32418-5|SLC8A1;ENSG00000183023|ENST00000332839|SLC8A1	nc|ENSG00000183023|P32418-2|SLC8A1	nc|ENSG00000183023|P32418-2|SLC8A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.3193359375	2	581.321711	1160.62887	0.54788	0.00031849	4.0572	0.0023585	4.6051	0.002677	581.323882197196	63.705	0.50563	63.828	63.602	64.107	0.12252					36	20	2	0	0	0	0.86348	1	5614	5614		31.53	1.2121	1	128950			19028	7494	12833	12842	22028	22028					0.05497942749479989
ITTGVLLVP	9	Unmodified	_ITTGVLLVP_					0	0	0			REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.589599609375	2	456.791861	911.569169	-1.5077	-0.00068871	4.0673	0.0018579	2.5596	0.0011692	456.7936177426928	47.73	2.6636	48.2	47.298	49.962	0.46941					100	65	2	0	0	0	0.20789	1	4476	4476		31.955	24.265	1	180750	+		19029	17137	12834	12843	22029	22029					0.10984716596749422
ITTGVLLVP	9	Unmodified	_ITTGVLLVP_					0	0	0			REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	456.791861	911.569169	-1.7471	-0.00079807	4.6917	0.0021431	2.9446	0.0013451	456.7939004429171	47.865	1.2986	47.865	47.56	48.858	0	-0.10169	0.0011503	NaN	24.203	78	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199470	+		19030	17137	12834	12843							0.10984716596749422
ITTRQYLLKQ	10	Unmodified	_ITTRQYLLKQ_					0	0	0			REV__nc|ENSG00000143514|Q13625-2|TP53BP2	REV__nc|ENSG00000143514|Q13625-2|TP53BP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.0211791992188	2	632.374612	1262.73467	0.72955	0.00046135	-1.4936	-0.00094452	-0.76405	-0.00048317	632.3733423758817	18.125	0.4182	17.648	17.378	17.796	-0.47694					16	8	3	0	0	0	0.37624	1	326	326		35.152	11.774	1	80791	+		19031	19819	12835	12844	22030	22030					0.11381323385603537
ITTRQYLLKQ	10	Unmodified	_ITTRQYLLKQ_					0	0	0			REV__nc|ENSG00000143514|Q13625-2|TP53BP2	REV__nc|ENSG00000143514|Q13625-2|TP53BP2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	632.374612	1262.73467	1.2683	0.00080207	-2.1666	-0.0013701	-0.89827	-0.00056805	632.3729124912238	18.275	0.27458	17.654	17.493	17.767	-0.62141	0.0030249	-0.00036085	NaN	35.152	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107880	+		19032	19819	12835	12844							0.11381323385603537
ITTYLYNL	8	Unmodified	_ITTYLYNL_					0	0	0			REV__nc|ENSG00000174844|Q6ZR08|DNAH12	REV__nc|ENSG00000174844|Q6ZR08|DNAH12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.7681579589844	2	500.771126	999.527698	0.12786	6.403E-05	-4.2809	-0.0021438	-4.1531	-0.0020797	500.7687392027706	38.334	0.54691	38.306	38.039	38.586	-0.027843					18	12	2	0	0	0	0.89043	1	2587	2587		35.618	0.46626	1	97068	+		19033	30045	12836	12845	22031	22031					0.02791535837422998
ITVIGVIH	8	Unmodified	_ITVIGVIH_					0	0	0			REV__ENST00000507080.5_1_4:176556058-176562011:-|nuORF	REV__ENST00000507080.5_1_4:176556058-176562011:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2950134277344	2	426.271096	850.527639	-0.18309	-7.8048E-05	3.9434	0.001681	3.7603	0.0016029	426.27240869003043	74.63	0.12667	74.672	74.617	74.744	0.0429					5	4	2	0	0	0	0.4196	1	7147	7147		28.254	0	1	27713	+		19034	27899	12837	12846	22032	22032					0.09639580628083877
ITVNRLFLD	9	Unmodified	_ITVNRLFLD_					0	0	0			REV__ENST00000398844.6_1_5:134060788-134060881:+|nuORF	REV__ENST00000398844.6_1_5:134060788-134060881:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.8165893554688	2	545.816399	1089.61824	0.11328	6.183E-05	-0.0090844	-4.9584E-06	0.1042	5.6872E-05	545.8161499984518	68.441	0.82027	68.404	68.067	68.887	-0.036301					63	27	3	0	0	0	0.16822	3	6583	6583;6607;6616		80.455	12.198	1	496740	+		19035	26215	12838	12847	22033;22034;22035	22033					0.07702004885709357
ITVPLSVIS	9	Unmodified	_ITVPLSVIS_					0	0	0		nc|ENSG00000170322|Q6P4R8-3|NFRKB;ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB	nc|ENSG00000170322|Q6P4R8-3|NFRKB	nc|ENSG00000170322|Q6P4R8-3|NFRKB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7909851074219	2	464.789318	927.564084	-1.14	-0.00052988	4.1432	0.0019257	3.0031	0.0013958	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.7932	1	1768	1768		21.96	0	1	286820			19036	6575	12839	12848	22036	22036					0.09740412734140591
ITVSPNGVAFV	11	Unmodified	_ITVSPNGVAFV_					0	0	0		ENSG00000009413|ENST00000368802|REV3L;nc|ENSG00000009413|O60673-2|REV3L	ENSG00000009413|ENST00000368802|REV3L	ENSG00000009413|ENST00000368802|REV3L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3067016601562	2	552.308406	1102.60226	-1.4446	-0.00079788	-2.0305	-0.0011215	-3.4752	-0.0019194	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.62614	1	9240	9240		41.427	8.6142	1	1677300			19037	754	12840	12849	22037	22037					0.055062986488110255
ITVTKSTKKSA	11	Unmodified	_ITVTKSTKKSA_					0	0	0			REV__ENSG00000147010|ENST00000397821|SH3KBP1	REV__ENSG00000147010|ENST00000397821|SH3KBP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3510131835938	2	582.353345	1162.69214	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.21	1	116.18	115.68	116.68	-0.02433								0	0	0	0.56276	1	12864	12864		30.569	2.6866	1		+		19038	20045	12841	12850	22038	22038					0.11729928257386746
ITVTKSTKKSA	11	Unmodified	_ITVTKSTKKSA_					0	0	0			REV__ENSG00000147010|ENST00000397821|SH3KBP1	REV__ENSG00000147010|ENST00000397821|SH3KBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3532104492188	2	582.353345	1162.69214	0.72245	0.00042072	-0.52655	-0.00030664	0.19589	0.00011408	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.72106	1	11199	11199		28.081	0.19925	1	132960000	+		19039	20045	12841	12850	22039	22039					0.11729928257386746
ITVTSSKALR	10	Unmodified	_ITVTSSKALR_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|O94854|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3267211914062	2	538.327131	1074.63971	-0.15636	-8.4174E-05	-0.2849	-0.00015337	-0.44126	-0.00023754	538.3269075153179	101.16	2.8222	101.19	100.44	103.26	0.031036					310	67	7	0	0	0	0.86348	1	11042	11042		31.53	2.3803	1	74691000			19040	3510	12842	12851	22040	22040					0.10537389914406958
ITVTSSKALR	10	Unmodified	_ITVTSSKALR_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|O94854|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3275756835938	2	538.327131	1074.63971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.32	1	113.35	112.85	113.85	0.027321								0	0	0	0.45132	1	12380	12380		26.693	2.1737	1				19041	3510	12842	12851	22041	22041					0.10537389914406958
ITVVILVYG	9	Unmodified	_ITVVILVYG_					0	0	0			REV__ENSG00000185926|ENST00000328188|OR4C46	REV__ENSG00000185926|ENST00000328188|OR4C46	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	488.34967041015625	2	488.807511	975.600469	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.92	1	117.92	117.42	118.42	0								0	0	0	0.31088	1	12028	12028		26.796	7.4361	1		+		19042	22806	12843	12852	22042	22042					0.11169289630856838
ITVVVLHSA	9	Unmodified	_ITVVVLHSA_					0	0	0			REV__ENSG00000221813|ENST00000641698|OR6B1	REV__ENSG00000221813|ENST00000641698|OR6B1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.2104797363281	2	469.78711	937.559667	-0.29607	-0.00013909	0.6043	0.00028389	0.30823	0.0001448	469.7872668152042	24.095	0.41919	24.049	23.796	24.215	-0.04598					13	9	2	0	0	0	0.20789	1	909	909		23.042	0	1	15305	+		19043	23705	12844	12853	22043	22043					0.08838948311233707
ITWASGLRK	9	Unmodified	_ITWASGLRK_					0	0	0		ENST00000480582.1_1_7:150555040-150557681:+|nuORF	ENST00000480582.1_1_7:150555040-150557681:+|nuORF	ENST00000480582.1_1_7:150555040-150557681:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8287353515625	2	516.303458	1030.59236	0.17217	8.8894E-05	0.64237	0.00033166	0.81455	0.00042055	516.3022382712261	83.015	0.44667	83.489	83.213	83.66	0.47383					16	10	2	0	0	0	0.20789	1	9670	9670		20.947	0	1	90270			19044	12443	12845	12854	22044	22044					0.07829155434069435
ITWLLIKA	8	Unmodified	_ITWLLIKA_					0	0	0		nc|ENSG00000081985|Q99665-2|IL12RB2;nc|ENSG00000081985|Q99665-3|IL12RB2;ENSG00000081985|ENST00000674203|IL12RB2	nc|ENSG00000081985|Q99665-2|IL12RB2	nc|ENSG00000081985|Q99665-2|IL12RB2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8070373535156	2	479.310221	956.605889	-2.8914	-0.0013859	-2.2299	-0.0010688	-5.1213	-0.0024547	479.30910690157845	38.473	0.50259	38.484	38.125	38.627	0.011173					19	11	2	0	0	0	0.4196	1	2599	2599		18.324	0	1	47978			19045	1476	12846	12855	22045	22045					0.12585013213322327
IVAAVVKI	8	Unmodified	_IVAAVVKI_					0	0	0		ENSG00000172324|ENST00000302040|OR5A2	ENSG00000172324|ENST00000302040|OR5A2	ENSG00000172324|ENST00000302040|OR5A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852478027344	2	406.783839	811.553125	0.022938	9.3307E-06	3.6731	0.0014942	3.696	0.0015035	406.7851827724374	33.215	0.93484	33.182	32.78	33.715	-0.032677					97	42	3	0	0	0	0.86791	1	1579	1579		28.254	7.7724	1	368720			19046	6761	12847	12856	22046	22046					0.13981055150509292
IVADHVASY	9	Unmodified	_IVADHVASY_					0	0	0		nc|ENSG00000237541|P01909|HLA-DQA1;ENSG00000237541|ENST00000374940|HLA-DQA2	nc|ENSG00000237541|P01909|HLA-DQA1	nc|ENSG00000237541|P01909|HLA-DQA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7508544921875	2	487.750724	973.486896	0.32443	0.00015824	-0.14704	-7.1717E-05	0.1774	8.6526E-05	487.7503506917501	49.045	0.56652	49.95	49.765	50.331	0.90424					26	13	3	0	0	0	0.31972	1	4781	4781		63.306	7.8021	1	663900			19047	8760	12848	12857	22047	22047					-0.0009080548219344564
IVADLEPL	8	Unmodified	_IVADLEPL_					0	0	0			REV__nc|ENSG00000197121|Q75T13-2|PGAP1	REV__nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25323486328125	2	435.252569	868.490584	-1.2943	-0.00056337	-1.5363	-0.00066866	-2.8306	-0.001232	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.86791	1	7894	7894		28.254	1.4582	1	1788100	+		19048	23199	12849	12858	22048	22048					0.05107864291653641
IVADLEPL	8	Unmodified	_IVADLEPL_					0	0	0			REV__nc|ENSG00000197121|Q75T13-2|PGAP1	REV__nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2520751953125	2	435.252569	868.490584	-0.16595	-7.2231E-05	-2.6833	-0.0011679	-2.8492	-0.0012401	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.86288	1	8125	8125		26.796	0	1	2823900	+		19049	23199	12849	12858	22049	22049					0.05107864291653641
IVADLEPL	8	Unmodified	_IVADLEPL_					0	0	0			REV__nc|ENSG00000197121|Q75T13-2|PGAP1	REV__nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2516784667969	2	435.252569	868.490584	0.1561	6.7942E-05	-3.024	-0.0013162	-2.8679	-0.0012483	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.89457	1	8404	8404		37.028	1.8278	1	3292300	+		19050	23199	12849	12858	22050	22050					0.05107864291653641
IVADLEPL	8	Unmodified	_IVADLEPL_					0	0	0			REV__nc|ENSG00000197121|Q75T13-2|PGAP1	REV__nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25311279296875	2	435.252569	868.490584	-1.5606	-0.00067925	-1.3016	-0.00056653	-2.8622	-0.0012458	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.86791	2	8121	8121;8132		44.531	9.3304	1	3322700	+		19051	23199	12849	12858	22051;22052	22051					0.05107864291653641
IVADLEPLL	9	Unmodified	_IVADLEPLL_					0	0	0			REV__nc|ENSG00000197121|Q75T13-2|PGAP1	REV__nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7963562011719	2	491.794601	981.574648	-0.41148	-0.00020237	2.6813	0.0013187	2.2699	0.0011163	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.76996	1	4499	4499		33.516	6.7195	1	887820	+		19052	23199	12850	12859	22053	22053					0.08312395388554705
IVADPKII	8	Unmodified	_IVADPKII_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7799072265625	2	434.778754	867.542954	-1.8344	-0.00079754	4.3253	0.0018805	2.4909	0.001083	434.7805085345101	43.07	1.706	43.07	42.535	44.241	0					126	41	4	0	0	0	0.92457	1	2991	2991		47.916	7.343	1	2514600	+		19053	16911	12851	12860	22054	22054					0.10388447425293634
IVADPKII	8	Unmodified	_IVADPKII_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77996826171875	2	434.778754	867.542954	0.048931	2.1274E-05	3.263	0.0014187	3.312	0.00144	434.780055906595	38.381	1.4097	38.353	37.994	39.403	-0.027843					122	32	4	0	0	0	0.884	1	2563	2563		33.516	1.5607	1	2404700	+		19054	16911	12851	12860	22055	22055					0.10388447425293634
IVADPKII	8	Unmodified	_IVADPKII_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7792663574219	2	434.778754	867.542954	0.13644	5.932E-05	2.2845	0.00099327	2.421	0.0010526	434.77963633612353	39.861	1.5425	39.83	39.322	40.865	-0.03027					156	40	5	0	0	0	0.91005	1	2920	2920		42.474	5.446	1	4621500	+		19055	16911	12851	12860	22056	22056					0.10388447425293634
IVADPKII	8	Unmodified	_IVADPKII_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7796936035156	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.229	1	55.221	54.721	55.721	-0.0077095								0	0	0	0.30457	1	4909	4909		50.025	7.5501	1		+		19056	16911	12851	12860	22057	22057					0.10388447425293634
IVADPKII	8	Unmodified	_IVADPKII_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77984619140625	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.557	1	55.547	55.047	56.047	-0.010136								0	0	0	0.29498	1	4954	4954		26.796	2.5934	1		+		19057	16911	12851	12860	22058	22058					0.10388447425293634
IVADPKII	8	Unmodified	_IVADPKII_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796630859375	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.912	1	57.882	57.382	58.382	-0.029865								0	0	0	0.29344	1	5362	5362		31.955	0	1		+		19058	16911	12851	12860	22059	22059					0.10388447425293634
IVADPKII	8	Unmodified	_IVADPKII_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7813720703125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.476	1	66.505	66.005	67.005	0.02858								0	0	0	0.29816	1	6290	6290		38.806	5.2906	1		+		19059	16911	12851	12860	22060	22060					0.10388447425293634
IVADPKII	8	Unmodified	_IVADPKII_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.87922	2	3107	3107;3255		52.299	9.8247	1	1327200	+		19060	16911	12851	12860	22061;22062	22061					0.10388447425293634
IVADPKII	8	Unmodified	_IVADPKII_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799987792969	2	434.778754	867.542954	-0.23402	-0.00010175	2.835	0.0012326	2.601	0.0011308	434.77987896985167	43.157	1.7547	43.107	42.38	44.135	-0.050308					136	44	4	0	0	0	0.884	1	3032	3032		33.516	1.5607	1	2479900	+		19061	16911	12851	12860	22063	22063					0.10388447425293634
IVADPKII	8	Unmodified	_IVADPKII_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7797546386719	2	434.778754	867.542954	-0.29603	-0.00012871	3.1388	0.0013647	2.8428	0.001236	434.77998100939635	44.91	1.6932	44.842	44.077	45.77	-0.068634					139	41	4	0	0	0	0.884	1	3122	3122		33.516	1.5607	1	1190800	+		19062	16911	12851	12860	22064	22064					0.10388447425293634
IVADPKII	8	Unmodified	_IVADPKII_					0	0	0			REV__ENSG00000086288|ENST00000199447|NME8	REV__ENSG00000086288|ENST00000199447|NME8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	434.778754	867.542954	-0.97374	-0.00042336	4.0019	0.0017399	3.0281	0.0013166	434.78044280268495	64.271	3.3612	64.301	62.229	65.59	0.030243					229	142	2	0	0	0	0.89457	1	5534	5534		37.028	1.8278	1	223270	+		19063	16911	12851	12860	22065	22065					0.10388447425293634
IVAFNVSG	8	Unmodified	_IVAFNVSG_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.7237548828125	2	403.723978	805.433404	1.627	0.00065685	-1.0189	-0.00041134	0.60811	0.00024551	403.7233660370291	64.819	1.3406	64.846	63.954	65.295	0.027138					55	40	2	0	0	0	0.88915	1	6156	6156		35.201	8.4046	1	120560	+		19064	20903	12852	12861	22066	22066					0.02290441805962473
IVAGRGTPSSA	11	Unmodified	_IVAGRGTPSSA_					0	0	0		ENST00000328560.12_2_3:130613343-130613580:+|nuORF	ENST00000328560.12_2_3:130613343-130613580:+|nuORF	ENST00000328560.12_2_3:130613343-130613580:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.27972412109375	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.73893	1	8709	8709		24.519	0	1	1261800			19065	10093	12853	12862	22067	22067					0.039116708121468946
IVAGRGTPSSA	11	Unmodified	_IVAGRGTPSSA_					0	0	0		ENST00000328560.12_2_3:130613343-130613580:+|nuORF	ENST00000328560.12_2_3:130613343-130613580:+|nuORF	ENST00000328560.12_2_3:130613343-130613580:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.27923583984375	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.61369	1	9403	9403		42.864	10.909	1	1903500			19066	10093	12853	12862	22068	22068					0.039116708121468946
IVAGSLITK	9	Unmodified	_IVAGSLITK_					0	0	0		nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;ENSG00000196504|ENST00000545856|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.2892761230469	2	451.289485	900.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.021	1	43.454	42.954	43.954	0.4334								0	0	0	0.32255	1	3866	3866		44.377	3.599	1				19067	8065	12854	12863	22069	22069					0.11015832453983876
IVAGSLITK	9	Unmodified	_IVAGSLITK_					0	0	0		nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;ENSG00000196504|ENST00000545856|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.2888488769531	2	451.289485	900.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.098	1	43.531	43.031	44.031	0.4334								0	0	0	0.078451	1	3877	3877		80.455	10.827	1				19068	8065	12854	12863	22070	22070					0.11015832453983876
IVAGSLITK	9	Unmodified	_IVAGSLITK_					0	0	0		nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;ENSG00000196504|ENST00000545856|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.28814697265625	2	451.289485	900.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.181	1	43.615	43.115	44.115	0.4334								0	0	0	0.034829	1	3889	3889		98.582	13.421	1				19069	8065	12854	12863	22071	22071					0.11015832453983876
IVAGSLITK	9	Unmodified	_IVAGSLITK_					0	0	0		nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;ENSG00000196504|ENST00000545856|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.2889404296875	2	451.289485	900.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.001	1	43.713	43.213	44.213	0.71159								0	0	0	0.094338	1	3877	3877		77.318	17.199	1				19070	8065	12854	12863	22072	22072					0.11015832453983876
IVAIAWTPR	9	Unmodified	_IVAIAWTPR_					0	0	0		ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8087158203125	2	513.808377	1025.6022	0.090877	4.6693E-05	1.0576	0.00054341	1.1485	0.00059011	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.74721	1	4165	4165		37.159	3.6435	1	1448700			19071	7959	12855	12864	22073	22073					0.0904234343945518
IVAIKMTAP	9	Unmodified	_IVAIKMTAP_					0	0	0			REV__nc|ENSG00000144908|O75891-3|ALDH1L1	REV__nc|ENSG00000144908|O75891-3|ALDH1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2877197265625	2	472.285889	942.557224	2.0257	0.00095671	1.7357	0.00081974	3.7614	0.0017765	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.78983	1	10465	10465		27.882	0	1	50843000	+		19072	29909	12856	12865	22074	22074					0.08364776581902333
IVAIKPNI	8	Unmodified	_IVAIKPNI_					0	0	0		ENST00000389010.7_1_4:79800122-79800278:+|nuORF	ENST00000389010.7_1_4:79800122-79800278:+|nuORF	ENST00000389010.7_1_4:79800122-79800278:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7803039550781	2	434.286746	866.558939	-0.11866	-5.1532E-05	3.1791	0.0013806	3.0604	0.0013291	434.28809034133786	35.82	1.6702	35.808	35.246	36.916	-0.012203					70	36	3	0	0	0	0.4196	1	2397	2397		13.775	0	1	289820			19073	10988	12857	12866	22075	22075					0.12032153662175915
IVAIKPNI	8	Unmodified	_IVAIKPNI_					0	0	0		ENST00000389010.7_1_4:79800122-79800278:+|nuORF	ENST00000389010.7_1_4:79800122-79800278:+|nuORF	ENST00000389010.7_1_4:79800122-79800278:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77947998046875	2	434.286746	866.558939	1.2567	0.00054575	1.0246	0.00044497	2.2813	0.00099072	434.2871622551633	45.841	1.6145	45.837	45.317	46.932	-0.0041618					56	38	2	0	0	0	0.4196	1	3667	3667		20.482	0	1	202890			19074	10988	12857	12866	22076	22076					0.12032153662175915
IVAILCNK	8	Unmodified	_IVAILCNK_					0	0	0			REV__ENST00000321276.7_1_2:223423754-223423841:+|nuORF	REV__ENST00000321276.7_1_2:223423754-223423841:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2657165527344	2	437.264956	872.515359	1.7622	0.00077054	0.050084	2.19E-05	1.8123	0.00079244	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.81548	1	987	987		20.482	0	1	1079000	+		19075	25008	12858	12867	22077	22077					0.07400220893396181
IVAILKGR	8	Unmodified	_IVAILKGR_					0	0	0			REV__ENSG00000128524|ENST00000249289|ATP6V1F	REV__ENSG00000128524|ENST00000249289|ATP6V1F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.30029296875	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.82419	1	6509	6509		13.775	0.81615	1	1852500	+		19076	18777	12859	12868	22078	22078					0.14627262273370434
IVAITQVTSVF	11	Unmodified	_IVAITQVTSVF_					0	0	0		ENSG00000196184|ENST00000423932|OR10J1;nc|ENSG00000196184|P30954|OR10J1	ENSG00000196184|ENST00000423932|OR10J1	ENSG00000196184|ENST00000423932|OR10J1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3430786132812	2	589.344989	1176.67542	-0.40075	-0.00023618	-3.0716	-0.0018102	-3.4723	-0.0020464	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.7434	1	8966	8966		23.523	0.48021	1	4112500			19077	8024	12860	12869	22079	22079					0.09415427371413898
IVAITQVTSVF	11	Unmodified	_IVAITQVTSVF_					0	0	0		ENSG00000196184|ENST00000423932|OR10J1;nc|ENSG00000196184|P30954|OR10J1	ENSG00000196184|ENST00000423932|OR10J1	ENSG00000196184|ENST00000423932|OR10J1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3436889648438	2	589.344989	1176.67542	0.82336	0.00048524	-4.2828	-0.002524	-3.4594	-0.0020388	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.67778	1	11394	11394		35.152	2.4015	1	9460500			19078	8024	12860	12869	22080	22080					0.09415427371413898
IVAIVAKR	8	Unmodified	_IVAIVAKR_					0	0	0		ENSG00000182938|ENST00000328801|OTOP3;nc|ENSG00000182938|Q7RTS5|OTOP3	ENSG00000182938|ENST00000328801|OTOP3	ENSG00000182938|ENST00000328801|OTOP3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.300048828125	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.80127	1	6886	6886		16.705	1.0687	1	1072400			19079	7485	12861	12870	22081	22081					0.14627262273359065
IVAKLLFGP	9	Unmodified	_IVAKLLFGP_					0	0	0			REV__nc|ENSG00000108528|Q02978-2|SLC25A11	REV__nc|ENSG00000108528|Q02978-2|SLC25A11	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.30419921875	2	479.310221	956.605889	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.095	1	59.095	58.595	59.595	0								0	0	0	0.31472	1	5135	5135		25.45	1.9275	1		+		19080	17716	12862	12871	22082	22082					0.12585013213345064
IVAKNHVFV	9	Unmodified	_IVAKNHVFV_					0	0	0			REV__nc|ENSG00000064933|P54277-2|PMS1	REV__nc|ENSG00000064933|P54277-2|PMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8092651367188	2	513.808377	1025.6022	-0.22351	-0.00011484	1.6547	0.00085019	1.4312	0.00073535	513.8091977878661	50.938	0.75373	50.946	50.757	51.511	0.0077438					49	23	3	0	0	0	0.7932	1	4386	4386		25.45	7.1258	1	174420	+		19081	16486	12863	12872	22083	22083					0.09042343439477918
IVAKNHVFV	9	Unmodified	_IVAKNHVFV_					0	0	0			REV__nc|ENSG00000064933|P54277-2|PMS1	REV__nc|ENSG00000064933|P54277-2|PMS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8076782226562	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.7932	1	3843	3843		26.796	2.5934	1	1550000	+		19082	16486	12863	12872	22084	22084					0.09042343439477918
IVAKTPVP	8	Unmodified	_IVAKTPVP_					0	0	0		ENST00000338820.7_1_10:74095033-74095504:-|nuORF	ENST00000338820.7_1_10:74095033-74095504:-|nuORF	ENST00000338820.7_1_10:74095033-74095504:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7668762207031	2	412.765646	823.516739	1.4126	0.00058306	1.8694	0.00077163	3.282	0.0013547	412.7662658707051	42.038	1.4358	42.042	41.461	42.897	0.003418					59	34	2	0	0	0	0.86288	1	3114	3114		26.796	3.7594	1	683700			19083	10210	12864	12873	22085	22085					0.0979217825380374
IVAKVREV	8	Unmodified	_IVAKVREV_					0	0	0		ENSG00000155660|ENST00000652332|PDIA4	ENSG00000155660|ENST00000652332|PDIA4	ENSG00000155660|ENST00000652332|PDIA4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7924499511719	2	457.295102	912.575651	0.031917	1.4595E-05	-0.66436	-0.00030381	-0.63244	-0.00028921	457.2947944284229	49.499	1.8729	49.496	48.346	50.219	-0.0030327					62	43	2	0	0	0	0.4196	1	4174	4174		27.882	4.8398	1	93120			19084	5335	12865	12874	22086	22086					0.11586654548136721
IVALHESII	9	Unmodified	_IVALHESII_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.80010986328125	2	497.800217	993.585882	-0.071616	-3.5651E-05	-0.15306	-7.6191E-05	-0.22467	-0.00011184	497.80000488344314	69.287	0.73403	69.313	68.996	69.73	0.02636					83	38	3	0	0	0	0.58151	1	6572	6572		47.916	1.9434	1	382150	+		19085	23025	12866	12875	22087	22087					0.0888321748270755
IVALHESII	9	Unmodified	_IVALHESII_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.8003845214844	2	497.800217	993.585882	-0.64969	-0.00032342	0.46674	0.00023234	-0.18295	-9.1074E-05	497.8003068501005	69.219	0.68383	69.182	68.854	69.538	-0.036964					74	32	3	0	0	0	0.5393	1	6699	6699		50.025	9.4519	1	424530	+		19086	23025	12866	12875	22088	22088					0.0888321748270755
IVALHESII	9	Unmodified	_IVALHESII_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	497.800217	993.585882	-0.071616	-3.5651E-05	-0.15306	-7.6191E-05	-0.22467	-0.00011184	497.80000488344314	69.287	0.73403	69.313	68.996	69.73	0.02636	0.088928	-0.00078163	NaN	50.025	83	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	382150	+		19087	23025	12866	12875							0.0888321748270755
IVALHLMT	8	Oxidation (M)	_IVALHLM(Oxidation (M))T_		IVALHLM(1)T		IVALHLM(45)T	0	0	1			REV__nc|ENSG00000080189|Q9NQQ7-2|SLC35C2	REV__nc|ENSG00000080189|Q9NQQ7-2|SLC35C2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2625732421875	2	457.262413	912.510274	0.26759	0.00012236	3.9569	0.0018093	4.2245	0.0019317	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.9159	1	7757	7757		44.531	7.5026	1	1458600	+		19088	16796	12867	12876	22089	22089		241			0.050519170307893546
IVALILSTK	9	Unmodified	_IVALILSTK_					0	0	0		ENSG00000185883|ENST00000330398|ATP6V0C	ENSG00000185883|ENST00000330398|ATP6V0C	ENSG00000185883|ENST00000330398|ATP6V0C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.3211364746094	2	479.320786	956.627018	-0.30085	-0.0001442	0.37388	0.00017921	0.073028	3.5004E-05	479.3208133594379	59.198	1.9933	59.591	59.148	61.142	0.39204					98	51	4	0	0	0	1.2037E-08	3	6245	6210;6222;6245		162.25	48.841	1	3594100			19089	7750	12868	12877	22090;22091;22092	22092					0.14696978522181325
IVALILSTK	9	Unmodified	_IVALILSTK_					0	0	0		ENSG00000185883|ENST00000330398|ATP6V0C	ENSG00000185883|ENST00000330398|ATP6V0C	ENSG00000185883|ENST00000330398|ATP6V0C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3208312988281	2	479.320786	956.627018	-1.0936	-0.00052421	1.1299	0.00054157	0.03622	1.7361E-05	479.32118434179597	59.118	1.5699	59.671	59.215	60.785	0.55323					100	40	4	0	0	0	0.0062975	4	6224	6206;6224;6235;6246		136.27	45.898	1	3621700			19090	7750	12868	12877	22093;22094;22095;22096	22094					0.14696978522181325
IVALSVALP	9	Unmodified	_IVALSVALP_					0	0	0			REV__ENSG00000170075|ENST00000367282|GPR37L1	REV__ENSG00000170075|ENST00000367282|GPR37L1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.78741455078125	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.3636	1	3029	3029		60.294	0	1	11085000	+		19091	21629	12869	12878	22097	22097					0.11308733942325944
IVALVPGTV	9	Unmodified	_IVALVPGTV_					0	0	0			REV__ENSG00000142949|ENST00000359947|PTPRF	REV__ENSG00000142949|ENST00000359947|PTPRF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2520751953125	2	434.778754	867.542954	-1.2603	-0.00054797	4.3724	0.001901	3.1121	0.0013531	434.78068299770393	82.876	1.7786	82.876	81.847	83.625	0					58	44	2	0	0	0	0.20789	1	7763	7763		31.955	0	1	55754	+		19092	19763	12870	12879	22098	22098					0.10388447425282266
IVAPKLID	8	Unmodified	_IVAPKLID_					0	0	0			REV__ENSG00000204147|ENST00000647317|ASAH2B	REV__ENSG00000204147|ENST00000647317|ASAH2B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7804260253906	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.665	1	67.695	67.195	68.195	0.030571								0	0	0	0.29568	1	6433	6433		35.201	3.2459	1		+		19093	23016	12871	12880	22099	22099					0.10388447425293634
IVAPKLID	8	Unmodified	_IVAPKLID_					0	0	0			REV__ENSG00000204147|ENST00000647317|ASAH2B	REV__ENSG00000204147|ENST00000647317|ASAH2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7803039550781	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.884	1	3588	3588		33.516	3.674	1	1959200	+		19094	23016	12871	12880	22100	22100					0.10388447425293634
IVAPKLID	8	Unmodified	_IVAPKLID_					0	0	0			REV__ENSG00000204147|ENST00000647317|ASAH2B	REV__ENSG00000204147|ENST00000647317|ASAH2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77972412109375	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.79929	1	2148	2148		18.324	0	1	4737100	+		19095	23016	12871	12880	22101	22101					0.10388447425293634
IVAPKLID	8	Unmodified	_IVAPKLID_					0	0	0			REV__ENSG00000204147|ENST00000647317|ASAH2B	REV__ENSG00000204147|ENST00000647317|ASAH2B	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.806	1	67.934	67.434	68.434	0.12748								0	0	0	0.29452	1	6076	6076		33.516	8.0654	1		+		19096	23016	12871	12880	22102	22102					0.10388447425293634
IVAPNFGEEV	10	Unmodified	_IVAPNFGEEV_					0	0	0			REV__nc|ENSG00000140284|O14975-2|SLC27A2	REV__nc|ENSG00000140284|O14975-2|SLC27A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	537.7794799804688	2	537.776939	1073.53933	0.3279	0.00017634	1.7158	0.00092274	2.0437	0.0010991	537.7776322797132	43.904	0.98605	43.961	43.678	44.664	0.056747					36	23	2	0	0	0	0.77314	1	3074	3074		40.778	1.972	1	152290	+		19097	29887	12872	12881	22103	22103					0.005497328607589225
IVAPRRRD	8	Unmodified	_IVAPRRRD_					0	0	0			REV__ENSG00000165733|ENST00000374518|BMS1	REV__ENSG00000165733|ENST00000374518|BMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7980041503906	2	491.798875	981.583196	-2.4951	-0.0012271	-4.3937	-0.0021608	-6.8888	-0.0033879	491.79691795705514	63.228	1.9612	63.256	62.751	64.712	0.02813					100	71	2	0	0	0	0.884	1	6006	6006		33.516	8.0654	1	93294	+		19098	21213	12873	12882	22104	22104					0.09166806868415733
IVAPVSIAI	9	Unmodified	_IVAPVSIAI_					0	0	0		ENST00000559758.5_1_15:76566725-76584849:-|nuORF	ENST00000559758.5_1_15:76566725-76584849:-|nuORF	ENST00000559758.5_1_15:76566725-76584849:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7776184082031	2	441.786579	881.558604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.654	1	54.646	54.146	55.146	-0.0077095								0	0	0	0.31088	1	4831	4831		26.796	1.3459	1				19099	13811	12874	12883	22105	22105					0.11308733942325944
IVASAPIVKG	10	Unmodified	_IVASAPIVKG_					0	0	0			REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.8026123046875	2	477.80276	953.590967	0.017832	8.52E-06	0.077815	3.718E-05	0.095646	4.57E-05	477.8025245816942	50.458	0.97669	51.21	50.841	51.818	0.75174					48	23	3	0	0	0	0.71042	1	5021	5021		44.117	13.799	1	1001800	+		19100	21044	12875	12884	22106	22106					0.11231521345337114
IVAVAPKGQT	10	Unmodified	_IVAVAPKGQT_					0	0	0			REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1	REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2948913574219	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.835	1	62.949	62.449	63.449	0.11388								0	0	0	0.45132	1	5484	5484		30.318	2.4355	1		+		19101	17290	12876	12885	22107	22107					0.08914333339953373
IVAVAVPILI	10	Unmodified	_IVAVAVPILI_					0	0	0			REV__ENSG00000113594|ENST00000453190|LIFR	REV__ENSG00000113594|ENST00000453190|LIFR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34814453125	2	504.346803	1006.67905	0.33922	0.00017108	2.4867	0.0012542	2.8259	0.0014252	504.34787681468055	34.758	1.3281	34.968	34.604	35.932	0.21002					94	33	4	0	0	0	0.86786	1	2583	2583		26.796	0	1	1680800	+		19102	18001	12877	12886	22108	22108					0.175981419359573
IVAVGKLL	8	Unmodified	_IVAVGKLL_					0	0	0			REV__nc|ENSG00000258186|Q9GIP4-1|SLC7A5P2	REV__nc|ENSG00000258186|Q9GIP4-1|SLC7A5P2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7853698730469	2	406.783839	811.553125	0.30634	0.00012461	3.4308	0.0013956	3.7371	0.0015202	406.7851080123586	29.615	1.556	29.525	28.974	30.53	-0.089546					92	35	4	0	0	0	0.86791	1	1922	1922		28.254	1.4582	1	1963500	+		19103	28134	12878	12887	22109	22109					0.13981055150509292
IVAVKVSPV	9	Unmodified	_IVAVKVSPV_					0	0	0		ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30096435546875	2	456.299853	910.585153	-1.2496	-0.00057018	3.0457	0.0013898	1.7962	0.00081959	456.3011111940197	43.185	1.5794	43.191	42.556	44.136	0.0057487					96	41	4	0	0	0	0.77244	1	2991	2991		32.812	6.0163	1	673120			19104	3770	12879	12888	22110	22110					0.1262842283366581
IVAVLLPVLA	10	Unmodified	_IVAVLLPVLA_					0	0	0		ENSG00000173535|ENST00000356864|TNFRSF10C	ENSG00000173535|ENST00000356864|TNFRSF10C	ENSG00000173535|ENST00000356864|TNFRSF10C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3478088378906	2	504.346803	1006.67905	2.0026	0.00101	0.50234	0.00025335	2.5049	0.0012633	504.34690233028635	36.516	1.5993	36.956	36.186	37.785	0.44043					102	38	4	0	0	0	0.86786	1	2883	2883		26.796	0	1	2044400			19105	6864	12880	12889	22111	22111					0.17598141935945932
IVAVVSSQRLH	11	Unmodified	_IVAVVSSQRLH_					0	0	0		ENSG00000204694|ENST00000377149|OR11A1	ENSG00000204694|ENST00000377149|OR11A1	ENSG00000204694|ENST00000377149|OR11A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.858154296875	2	604.859129	1207.70371	1.0175	0.00061544	-2.3109	-0.0013978	-1.2935	-0.00078236	604.8577747770171	81.696	1.319	81.841	80.932	82.251	0.14513					44	30	2	0	0	0	0.70847	1	7848	7848		33.922	6.8743	1	478340			19106	8479	12881	12890	22112	22112					0.10816170071393572
IVAVVSSQRLH	11	Unmodified	_IVAVVSSQRLH_					0	0	0		ENSG00000204694|ENST00000377149|OR11A1	ENSG00000204694|ENST00000377149|OR11A1	ENSG00000204694|ENST00000377149|OR11A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.57489013671875	3	403.575178	1207.70371	0.56211	0.00022685	-1.4705	-0.00059345	-0.90837	-0.00036659	403.57452270455985	81.745	1.4637	81.891	80.868	82.331	0.14551					81	33	4	0	0	0	0.66009	1	7814	7814		37.508	2.3561	1	2051300			19107	8479	12881	12890	22113	22113					0.10816170071393572
IVAVVSSQRLH	11	Unmodified	_IVAVVSSQRLH_					0	0	0		ENSG00000204694|ENST00000377149|OR11A1	ENSG00000204694|ENST00000377149|OR11A1	ENSG00000204694|ENST00000377149|OR11A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.859130859375	2	604.859129	1207.70371	-1.0601	-0.00064122	-0.4497	-0.00027201	-1.5098	-0.00091323	604.8590287609827	81.871	2.3278	81.986	81.043	83.371	0.11426					72	54	2	0	0	0	0.68431	1	7821	7821		31.53	1.2121	1	398390			19108	8479	12881	12890	22114	22114					0.10816170071393572
IVAVVSSQRLH	11	Unmodified	_IVAVVSSQRLH_					0	0	0		ENSG00000204694|ENST00000377149|OR11A1	ENSG00000204694|ENST00000377149|OR11A1	ENSG00000204694|ENST00000377149|OR11A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8572998046875	2	604.859129	1207.70371	0.044967	2.7199E-05	-0.8945	-0.00054104	-0.84953	-0.00051385	604.8584867584212	80.792	1.0733	81.319	80.907	81.98	0.52676					69	21	4	0	0	0	0.68431	1	9284	9284		24.519	0	1	4362400			19109	8479	12881	12890	22115	22115					0.10816170071393572
IVDDKSQVL	9	Unmodified	_IVDDKSQVL_					0	0	0			REV__ENSG00000100226|ENST00000216044|GTPBP1	REV__ENSG00000100226|ENST00000216044|GTPBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7842102050781	2	508.784764	1015.55498	-1.5374	-0.00078218	0.069339	3.5278E-05	-1.468	-0.0007469	508.7847523224276	42.315	0.89218	42.73	42.468	43.36	0.41553					45	21	3	0	0	0	0.30689	1	3785	3785		64.207	2.516	1	1231100	+		19110	17155	12882	12891	22116	22116					0.04782019377819324
IVDDQSFPY	9	Unmodified	_IVDDQSFPY_					0	0	0		ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENSG00000049860|ENST00000261416|HEXB	ENST00000513079.5_1_5:73981085-74001232:+|nuORF	ENST00000513079.5_1_5:73981085-74001232:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.2503051757812	2	542.253297	1082.49204	0.23761	0.00012885	-4.1306	-0.0022399	-3.893	-0.002111	542.2509291657893	21.197	0.71828	20.738	20.501	21.219	-0.4591					33	16	3	0	0	0	0.58151	1	764	764		47.916	10.756	1	179620			19111	989	12883	12892	22117	22117					-0.04590546410236129
IVDIQTQIRNL	11	Unmodified	_IVDIQTQIRNL_					0	0	0			REV__nc|ENSG00000058668|P23634-5|ATP2B4	REV__nc|ENSG00000058668|P23634-5|ATP2B4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2569274902344	3	438.257626	1311.75105	0.55491	0.00024319	-0.77193	-0.00033831	-0.21702	-9.5112E-05	438.25727820640566	29.88	1.2979	29.791	29.362	30.659	-0.089544					102	29	5	0	0	0	0.71207	1	1964	1964		29.551	2.5034	1	6394700	+		19112	29695	12884	12893	22118	22118					0.10764404551719053
IVDNSCEDV	9	Unmodified	_IVDNSCEDV_					0	0	0			REV__ENSG00000165185|ENST00000337530|KIAA1958	REV__ENSG00000165185|ENST00000337530|KIAA1958	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.2135925292969	2	497.213314	992.412076	0.21255	0.00010568	-0.32848	-0.00016332	-0.11593	-5.7641E-05	497.212888649851	35.508	1.1958	35.614	35.2	36.396	0.10604					56	37	3	0	0	0	0.7932	1	1870	1870		26.693	2.4902	1	148790	+		19113	21159	12885	12894	22119	22119					-0.08443356075736119
IVDNSCEDV	9	Unmodified	_IVDNSCEDV_					0	0	0			REV__ENSG00000165185|ENST00000337530|KIAA1958	REV__ENSG00000165185|ENST00000337530|KIAA1958	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	497.213314	992.412076	0.21255	0.00010568	-0.32848	-0.00016332	-0.11593	-5.7641E-05	497.212888649851	35.508	1.1958	35.614	35.2	36.396	0.10604	0.048063	0.00021323	NaN	26.693	56	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	148790	+		19114	21159	12885	12894							-0.08443356075736119
IVDNSCEDV	9	Unmodified	_IVDNSCEDV_					0	0	0			REV__ENSG00000165185|ENST00000337530|KIAA1958	REV__ENSG00000165185|ENST00000337530|KIAA1958	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	497.213314	992.412076	0.23622	0.00011745	-0.66132	-0.00032882	-0.42509	-0.00021136	497.21278140155886	35.578	1.4003	35.517	35.231	36.631	-0.060333	-0.048063	-0.00011776	NaN	26.693	70	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150920	+		19115	21159	12885	12894							-0.08443356075736119
IVDRFLHL	8	Unmodified	_IVDRFLHL_					0	0	0		nc|ENSG00000102763|A3KMH1-2|VWA8;nc|ENSG00000102763|A3KMH1-3|VWA8;ENSG00000102763|ENST00000379310|VWA8	nc|ENSG00000102763|A3KMH1-2|VWA8	nc|ENSG00000102763|A3KMH1-2|VWA8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.79815673828125	2	506.800552	1011.58655	0.018043	9.144E-06	1.4105	0.00071482	1.4285	0.00072396	506.80125221893354	53.037	1.9797	53.034	52.291	54.271	-0.0033035					105	54	3	0	0	0	0.85277	1	4609	4609		25.45	3.4903	1	173240			19116	2016	12886	12895	22120	22120					0.0812205692243424
IVEENKKLKA	10	Unmodified	_IVEENKKLKA_					0	0	0		ENST00000465771.3_1_1:39330344-39338266:-|nuORF;ENST00000495043.5_1_1:39330344-39338774:-|nuORF;ENSG00000214114|ENST00000397572|MYCBP	ENST00000465771.3_1_1:39330344-39338266:-|nuORF	ENST00000465771.3_1_1:39330344-39338266:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.3551025390625	2	586.355888	1170.69722	-1.4552	-0.00085327	2.9291	0.0017175	1.4739	0.00086421	586.3577938983987	73.5	0.88083	73.888	73.615	74.496	0.38779					30	23	2	0	0	0	0.86763	1	8258	8258		26.693	5.8558	1	727300			19117	8619	12887	12896	22121	22121					0.11870232119986213
IVELVKVLDPN	11	Unmodified	_IVELVKVLDPN_					0	0	0		CON__P34955	CON__P34955	CON__P34955	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8694458007812	2	619.871371	1237.72819	-0.18235	-0.00011304	-2.7647	-0.0017137	-2.947	-0.0018268	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.7144	1	9764	9764		29.17	5.6474	1	2627900		+	19118	597	12888	12897	22122	22122					0.11883385434225602
IVEMLKALH	9	Unmodified	_IVEMLKALH_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.310302734375	2	527.309895	1052.60524	0.30458	0.00016061	2.2378	0.00118	2.5424	0.0013406	527.3109007634706	82.716	1.747	83.19	82.836	84.583	0.47384					72	41	3	0	0	0	0.31972	1	9558	9558		63.306	13.865	1	1438500			19119	8999	12889	12898	22123	22123					0.08103850501947818
IVEMLKALH	9	Unmodified	_IVEMLKALH_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	527.309895	1052.60524	-0.037864	-1.9966E-05	5.0809	0.0026792	5.0431	0.0026593	527.3132412116439	83.135	1.2072	83.201	83.04	84.247	0.066719	-0.29017	0.0026009	NaN	63.306	37	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73256			19120	8999	12889	12898							0.08103850501947818
IVEMLKALH	9	Unmodified	_IVEMLKALH_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	527.309895	1052.60524	1.1335	0.00059773	4.2073	0.0022185	5.3408	0.0028163	527.3127027296558	83.586	1.0168	83.517	83.008	84.025	-0.069313	0.025055	0.0016795	NaN	63.306	35	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71632			19121	8999	12889	12898							0.08103850501947818
IVEMLKALH	9	Unmodified	_IVEMLKALH_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	527.309895	1052.60524	0.83844	0.00044212	4.4492	0.0023461	5.2876	0.0027882	527.3129957578701	83.376	0.95382	83.435	83.026	83.98	0.059258	-0.056714	0.0019346	NaN	63.306	36	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68462			19122	8999	12889	12898							0.08103850501947818
IVEMLKALH	9	Unmodified	_IVEMLKALH_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	527.309895	1052.60524	-0.12554	-6.6201E-05	3.5461	0.0018699	3.4206	0.0018037	527.3116871506219	83.407	0.8187	83.573	83.191	84.009	0.1651	0.08102	0.00098227	NaN	63.306	40	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156630			19123	8999	12889	12898							0.08103850501947818
IVEMLKALH	9	Unmodified	_IVEMLKALH_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	527.309895	1052.60524	0.67378	0.00035529	2.4809	0.0013082	3.1546	0.0016635	527.3112822219177	83.51	0.61013	83.657	83.395	84.005	0.14694	0.16585	-0.00014118	NaN	63.306	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114050			19124	8999	12889	12898							0.08103850501947818
IVEMLKALH	9	Unmodified	_IVEMLKALH_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	527.309895	1052.60524	-1.3706	-0.00072274	4.3178	0.0022768	2.9472	0.0015541	527.3122391057314	83.512	0.69683	83.65	83.352	84.049	0.13811	0.1589	0.0017961	NaN	63.306	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144640			19125	8999	12889	12898							0.08103850501947818
IVEMLKALH	9	Unmodified	_IVEMLKALH_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	527.309895	1052.60524	0.11157	5.8834E-05	2.155	0.0011364	2.2666	0.0011952	527.3109831996077	83.278	0.88343	83.709	83.495	84.378	0.43108	0.21736	-0.00048484	NaN	63.306	38	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	478430			19126	8999	12889	12898							0.08103850501947818
IVESASNPK	9	Unmodified	_IVESASNPK_					0	0	0			REV__ENSG00000134899|ENST00000652225|ERCC5	REV__ENSG00000134899|ENST00000652225|ERCC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.75604248046875	2	472.756007	943.497461	0.60168	0.00028445	-0.5705	-0.00026971	0.031184	1.4742E-05	472.75559990844266	25.1	0.58479	25.151	24.858	25.443	0.050451					37	20	2	0	0	0	0.67345	1	976	976		42.396	3.59	1	95939	+		19127	19175	12890	12899	22124	22124					0.023451771722307058
IVESASNPK	9	Unmodified	_IVESASNPK_					0	0	0			REV__ENSG00000134899|ENST00000652225|ERCC5	REV__ENSG00000134899|ENST00000652225|ERCC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7562255859375	2	472.756007	943.497461	-0.42571	-0.00020126	0.70012	0.00033099	0.27441	0.00012973	472.756162330355	25.453	0.69131	25.416	25.118	25.81	-0.037176					45	20	3	0	0	0	0.48102	1	1014	1014		52.937	5.0211	1	115270	+		19128	19175	12890	12899	22125	22125					0.023451771722307058
IVFKIYVV	8	Unmodified	_IVFKIYVV_					0	0	0			REV__ENST00000368667.6_1_6:112041260-112114912:-|nuORF	REV__ENST00000368667.6_1_6:112041260-112114912:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.8144226074219	2	490.812596	979.61064	-0.27993	-0.0001374	4.304	0.0021124	4.0241	0.0019751	490.8148731827681	17.044	0.22051	16.965	16.834	17.055	-0.079056					10	7	2	0	0	0	0.82464	1	178	178		21.702	2.3424	1	37546	+		19129	25602	12891	12900	22126	22126					0.12001897356071822
IVFKIYVV	8	Unmodified	_IVFKIYVV_					0	0	0			REV__ENST00000368667.6_1_6:112041260-112114912:-|nuORF	REV__ENST00000368667.6_1_6:112041260-112114912:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	490.812596	979.61064	-0.27993	-0.0001374	4.304	0.0021124	4.0241	0.0019751	490.8148731827681	17.044	0.22051	16.965	16.834	17.055	-0.079056	0.039137	0.00059127	NaN	21.702	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37546	+		19130	25602	12891	12900							0.12001897356071822
IVFLDVESTDT	11	Unmodified	_IVFLDVESTDT_					0	0	0			REV__nc|ENSG00000067141|Q92859-3|NEO1	REV__nc|ENSG00000067141|Q92859-3|NEO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	620.3184814453125	2	619.811176	1237.6078	1.1883	0.00073655	3.7953	0.0023524	4.9837	0.0030889	619.8130616287558	54.182	0.67599	54.238	53.825	54.501	0.055614					33	21	2	0	0	0	0.67762	1	4436	4436		25.574	0	1	159180	+		19131	16536	12892	12901	22127	22127					-0.0015006735004590155
IVFRKKVFRKN	11	Unmodified	_IVFRKKVFRKN_					0	0	0		ENSG00000165323|ENST00000525166|FAT3;nc|ENSG00000165323|Q8TDW7|FAT3	ENSG00000165323|ENST00000525166|FAT3	ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.97406005859375	3	478.973384	1433.89832	-1.5808	-0.00075714	4.0254	0.0019281	2.4447	0.0011709	478.9752399041666	51.639	1.4994	51.639	50.814	52.314	0					68	39	2	0	0	0	0.7896	1	4169	4169		13.508	4.2961	1	107410			19132	6072	12893	12902	22128	22128					0.19872965947138255
IVFRKKVFRKN	11	Unmodified	_IVFRKKVFRKN_					0	0	0		ENSG00000165323|ENST00000525166|FAT3;nc|ENSG00000165323|Q8TDW7|FAT3	ENSG00000165323|ENST00000525166|FAT3	ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97430419921875	3	478.973384	1433.89832	0.29105	0.00013941	2	0.00095795	2.2911	0.0010974	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.79224	1	3359	3359		12.957	4.1582	1	395190			19133	6072	12893	12902	22129	22129					0.19872965947138255
IVFRLLHE	8	Unmodified	_IVFRLLHE_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8087158203125	2	513.808377	1025.6022	0.090877	4.6693E-05	1.0576	0.00054341	1.1485	0.00059011	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.85277	1	4265	4265		25.45	0	1	1448700	+		19134	17579	12894	12903	22130	22130					0.0904234343945518
IVFSYNIY	8	Unmodified	_IVFSYNIY_					0	0	0			REV__L1MD_dup8496|chr20:13710280-13711144:+|2.129530705638713|0.4946376756638236|2.11|63.0|11|1|sense	REV__L1MD_dup8496|chr20:13710280-13711144:+|2.129530705638713|0.4946376756638236|2.11|63.0|11|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.7630615234375	2	509.765843	1017.51713	-0.51932	-0.00026473	-4.0527	-0.0020659	-4.572	-0.0023306	509.76358528526174	48.979	0.92498	48.955	48.619	49.544	-0.024033					38	20	3	0	0	0	0.67263	1	4161	4161		68.485	7.5128	1	440250	+		19135	29532	12895	12904	22131	22131					0.009075531829921601
IVFVHNKAV	9	Unmodified	_IVFVHNKAV_					0	0	0		ENSG00000064933|ENST00000441310|PMS1;nc|ENSG00000064933|P54277-2|PMS1	ENSG00000064933|ENST00000441310|PMS1	ENSG00000064933|ENST00000441310|PMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.80859375	2	513.808377	1025.6022	-0.12671	-6.5103E-05	1.3179	0.00067714	1.1912	0.00061204	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.78058	1	4036	4036		30.504	0	1	1731500			19136	1114	12896	12905	22132	22132					0.0904234343945518
IVFVLKDKPHN	11	Unmodified	_IVFVLKDKPHN_					0	0	0		ENSG00000132002|ENST00000254322|DNAJB1;nc|ENSG00000132002|P25685-2|DNAJB1;ENST00000429417.1_1_2:192746108-192746309:-|nuORF	ENSG00000132002|ENST00000254322|DNAJB1	ENSG00000132002|ENST00000254322|DNAJB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.25665283203125	3	437.259079	1308.75541	-0.16089	-7.0349E-05	-3.8349	-0.0016768	-3.9958	-0.0017472	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.72892	1	10542	10542		26.75	4.9693	1	727380			19137	3758	12897	12906	22133	22133					0.11337913765282792
IVFVLKDKPHN	11	Unmodified	_IVFVLKDKPHN_					0	0	0		ENSG00000132002|ENST00000254322|DNAJB1;nc|ENSG00000132002|P25685-2|DNAJB1;ENST00000429417.1_1_2:192746108-192746309:-|nuORF	ENSG00000132002|ENST00000254322|DNAJB1	ENSG00000132002|ENST00000254322|DNAJB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2559814453125	3	437.259079	1308.75541	-1.4866	-0.00065002	-2.4798	-0.0010843	-3.9663	-0.0017343	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.76251	1	10208	10208		19.263	0.73163	1	981430			19138	3758	12897	12906	22134	22134					0.11337913765282792
IVGCPLRG	8	Unmodified	_IVGCPLRG_					0	0	0		ENST00000222248.3_1_19:17988859-17994831:+|nuORF	ENST00000222248.3_1_19:17988859-17994831:+|nuORF	ENST00000222248.3_1_19:17988859-17994831:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.78436279296875	2	407.733823	813.453093	-1.9112	-0.00077926	-2.5899	-0.001056	-4.5011	-0.0018353	407.73267451037543	35.313	0.13418	35.352	35.239	35.373	0.038643					7	4	2	0	0	0	0.4196	1	1835	1835		8.2313	3.915	1	42969			19139	9175	12898	12907	22135	22135					0.038904945450553896
IVGFAMLGMI	10	Unmodified	_IVGFAMLGMI_					0	0	0		ENSG00000152402|ENST00000526355|GUCY1A2;nc|ENSG00000152402|P33402-3|GUCY1A2;nc|ENSG00000152402|P33402-2|GUCY1A2	ENSG00000152402|ENST00000526355|GUCY1A2	ENSG00000152402|ENST00000526355|GUCY1A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2976684570312	2	526.287574	1050.56059	0.50302	0.00026473	-3.5454	-0.0018659	-3.0423	-0.0016012	526.2838180599928	57.896	0.25048	58.45	58.347	58.597	0.55323					8	5	2	0	0	0	0.37624	1	6058	6058		35.201	13.498	1	169660			19140	5171	12899	12908	22136	22136					0.037337033642870665
IVGFKFTN	8	Unmodified	_IVGFKFTN_					0	0	0			REV__nc|ENSG00000132359|Q684P5-3|RAP1GAP2	REV__nc|ENSG00000132359|Q684P5-3|RAP1GAP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2541198730469	2	463.260728	924.506903	-0.85128	-0.00039436	-2.846	-0.0013184	-3.6973	-0.0017128	463.2596006577034	84.322	1.0584	84.757	84.045	85.103	0.43538					41	25	2	0	0	0	0.4196	1	9729	9729		31.955	0	1	154870	+		19141	18997	12900	12909	22137	22137					0.04162990248426013
IVGGNKGRSG	10	Unmodified	_IVGGNKGRSG_					0	0	0		ENSG00000015285|ENST00000376701|WAS	ENSG00000015285|ENST00000376701|WAS	ENSG00000015285|ENST00000376701|WAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7671813964844	2	472.76724	943.519927	-0.93004	-0.00043969	0.85085	0.00040225	-0.079188	-3.7437E-05	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.77314	1	8143	8143		40.778	0.20554	1	526610			19142	822	12901	12910	22138	22138					0.04590821360523023
IVGGYHVLSA	10	Unmodified	_IVGGYHVLSA_					0	0	0			REV__nc|ENSG00000104888|Q9P2U7-2|SLC17A7	REV__nc|ENSG00000104888|Q9P2U7-2|SLC17A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.27972412109375	2	508.282192	1014.54983	-0.055639	-2.828E-05	-3.7761	-0.0019193	-3.8318	-0.0019476	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.81018	1	9163	9163		38.806	8.4884	1	1918800	+		19143	17485	12902	12911	22139	22139					0.043137603058426066
IVGICVYL	8	Unmodified	_IVGICVYL_					0	0	0			REV__nc|ENSG00000155380|P53985-2|SLC16A1	REV__nc|ENSG00000155380|P53985-2|SLC16A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2555236816406	2	440.254057	878.493561	-1.1281	-0.00049663	4.1962	0.0018474	3.0681	0.0013507	440.2557479543984	62.714	1.4312	63.102	62.273	63.704	0.3878					74	32	3	0	0	0	0.84567	1	6694	6694		24.504	6.1796	1	707290	+		19144	20427	12903	12912	22140	22140					0.049454161448238665
IVGKARLI	8	Unmodified	_IVGKARLI_					0	0	0		ENST00000466452.1_1_1:161140355-161140406:+|nuORF	ENST00000466452.1_1_1:161140355-161140406:+|nuORF	ENST00000466452.1_1_1:161140355-161140406:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.300048828125	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.81724	1	7324	7324		14.664	0.88877	1	881780			19145	12137	12904	12913	22141	22141					0.14627262273359065
IVGMAVVKG	9	Unmodified	_IVGMAVVKG_					0	0	0		ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2645568847656	2	437.264956	872.515359	-0.37471	-0.00016385	2.1781	0.00095241	1.8034	0.00078857	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.7932	1	855	855		25.45	3.7478	1	970200			19146	8134	12905	12914	22142	22142					0.0740022089340755
IVGMAVVKG	9	Unmodified	_IVGMAVVKG_					0	0	0		ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2655334472656	2	437.264956	872.515359	0.51664	0.00022591	1.2835	0.00056123	1.8001	0.00078714	437.26538540238977	22.419	1.3051	22.41	21.975	23.28	-0.0088234					141	67	4	0	0	0	0.7932	1	690	690		24.203	4.206	1	1945900			19147	8134	12905	12914	22143	22143					0.0740022089340755
IVGMAVVKG	9	Unmodified	_IVGMAVVKG_					0	0	0		ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2650146484375	2	437.264956	872.515359	0.46111	0.00020163	1.1649	0.00050936	1.626	0.00071098	437.2654513325837	23.967	1.9466	23.969	23.291	25.237	0.0018959					213	95	5	0	0	0	0.5393	1	754	754		50.025	7.5501	1	2561300			19148	8134	12905	12914	22144	22144					0.0740022089340755
IVGRQGGQ	8	Unmodified	_IVGRQGGQ_					0	0	0			REV__ENST00000477706.1_1_X:53458466-53459266:-|nuORF	REV__ENST00000477706.1_1_X:53458466-53459266:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.26495361328125	2	407.730126	813.4457	1.2245	0.00049926	3.1922	0.0013016	4.4167	0.0018008	407.73143563042635	37.526	1.4247	37.839	37.083	38.508	0.31312					45	35	2	0	0	0	0.4196	1	3002	3002		7.1934	0	1	76508	+		19149	16649	12906	12915	22145	22145					0.031514782690123866
IVGSEVAM	8	Unmodified	_IVGSEVAM_					0	0	0			REV__ENST00000589630.1_1_18:32821039-32822911:+|nuORF	REV__ENST00000589630.1_1_18:32821039-32822911:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2090759277344	2	403.209847	804.40514	-1.2088	-0.00048741	-0.91536	-0.00036908	-2.1242	-0.00085649	403.20939277352	86.047	3.2334	86.047	85.315	88.548	0					134	74	4	0	0	0	0.91005	1	8223	8223		42.474	5.446	1	1412000	+		19150	29166	12907	12916	22146	22146					-0.004886241656436141
IVGVVIPVLV	10	Unmodified	_IVGVVIPVLV_					0	0	0		nc|ENSG00000122778|Q9HCM3-2|KIAA1549;ENSG00000122778|ENST00000422774|KIAA1549;nc|ENSG00000122778|Q9HCM3-3|KIAA1549;nc|ENSG00000122778|Q9HCM3-4|KIAA1549	nc|ENSG00000122778|Q9HCM3-2|KIAA1549	nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34490966796875	2	504.346803	1006.67905	0.11336	5.7171E-05	-3.112	-0.0015695	-2.9987	-0.0015124	504.3451867946114	55.153	1.8423	55.554	54.023	55.866	0.40101					89	43	3	0	0	0	0.85108	1	5544	5544		19.36	1.995	1	1856800			19151	3245	12908	12917	22147	22147					0.17598141935945932
IVGYPKEERF	10	Unmodified	_IVGYPKEERF_					0	0	0		nc|ENSG00000132837|Q9UI17-2|DMGDH;ENST00000518477.5_1_5:78317432-78365396:-|nuORF;ENSG00000132837|ENST00000255189|DMGDH	nc|ENSG00000132837|Q9UI17-2|DMGDH	nc|ENSG00000132837|Q9UI17-2|DMGDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.332763671875	2	619.332413	1236.65027	-0.67557	-0.0004184	0.68922	0.00042686	0.013646	8.4513E-06	619.3327788378971	58.365	1.0872	58.758	58.397	59.485	0.39209					65	25	4	0	0	0	0.23822	1	6109	6109		79.713	0.26157	1	3811700			19152	3832	12909	12918	22148	22148					0.041413725688244085
IVHAMKRGRTL	11	Unmodified	_IVHAMKRGRTL_					0	0	0			REV__nc|ENSG00000185024|Q92994-6|BRF1	REV__nc|ENSG00000185024|Q92994-6|BRF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.3844604492188	2	641.382249	1280.74994	0.021057	1.3506E-05	3.2118	0.00206	3.2328	0.0020735	641.3839926266708	102.89	1.2885	102.89	102.43	103.72	0					63	31	4	0	0	0	0.60058	1	10534	10534		44.377	6.869	1	1374800	+		19153	22729	12910	12919	22149	22149					0.12079911701835044
IVHATQLYRRG	11	Unmodified	_IVHATQLYRRG_					0	0	0		nc|ENSG00000186810|P49682-2|CXCR3;ENSG00000186810|ENST00000373693|CXCR3;nc|ENSG00000186810|P49682-3|CXCR3	nc|ENSG00000186810|P49682-2|CXCR3	nc|ENSG00000186810|P49682-2|CXCR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.5856628417969	3	438.586077	1312.7364	-0.85727	-0.00037599	-1.6073	-0.00070492	-2.4645	-0.0010809	438.58603368368296	31.551	0.945	31.631	31.297	32.242	0.079834					66	21	4	0	0	0	0.71803	1	2162	2162		28.577	0.93281	1	2788200			19154	7821	12911	12920	22150	22150					0.09254377194224617
IVIAPVLLVVG	11	Unmodified	_IVIAPVLLVVG_					0	0	0		ENSG00000119820|ENST00000238831|YIPF4	ENSG00000119820|ENST00000238831|YIPF4	ENSG00000119820|ENST00000238831|YIPF4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8400268554688	2	546.873185	1091.73182	0.84817	0.00046384	2.4245	0.0013259	3.2727	0.0017897	546.8756920193152	100.94	0.56059	101.08	100.73	101.29	0.14352					17	13	2	0	0	0	0.17566	1	10554	10554		40.573	23.208	1	270360			19155	3099	12912	12921	22151	22151					0.18962099998748272
IVIDKDKTVF	10	Unmodified	_IVIDKDKTVF_					0	0	0		ENSG00000009413|ENST00000368802|REV3L;nc|ENSG00000009413|O60673-2|REV3L;ENST00000467500.1_1_6:111678104-111680097:-|nuORF	ENSG00000009413|ENST00000368802|REV3L	ENSG00000009413|ENST00000368802|REV3L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3430786132812	2	589.344989	1176.67542	-1.324	-0.0007803	-2.248	-0.0013248	-3.572	-0.0021051	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86763	1	9735	9735		26.693	0	1	17904000			19156	754	12913	12922	22152	22152					0.09415427371413898
IVIDVGLVV	9	Unmodified	_IVIDVGLVV_					0	0	0		ENSG00000164893|ENST00000297524|SLC7A13	ENSG00000164893|ENST00000297524|SLC7A13	ENSG00000164893|ENST00000297524|SLC7A13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.7994689941406	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3067	3067		12.959	0.75233	1	890090			19157	6018	12914	12923	22153	22153					0.11905003113804469
IVIFTVKFV	9	Unmodified	_IVIFTVKFV_					0	0	0		ENST00000488537.1_1_1:145440673-145441098:+|nuORF	ENST00000488537.1_1_1:145440673-145441098:+|nuORF	ENST00000488537.1_1_1:145440673-145441098:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.3402709960938	2	533.338978	1064.6634	1.2441	0.00066355	1.0363	0.00055269	2.2804	0.0012162	533.3394000177375	99.114	2.7086	99.162	98.677	101.39	0.047531					171	63	4	0	0	0	0.7932	1	10583	10583		24.203	4.8428	1	3009900			19158	12632	12915	12924	22154	22154					0.133658554188969
IVIGLAMR	8	Unmodified	_IVIGLAMR_					0	0	0			REV__nc|ENSG00000115084|Q8WV83-2|SLC35F5	REV__nc|ENSG00000115084|Q8WV83-2|SLC35F5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.272705078125	2	436.772948	871.531344	0.39754	0.00017364	0.64314	0.00028091	1.0407	0.00045454	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.86288	1	1267	1267		26.796	6.3143	1	81327	+		19159	18083	12916	12925	22155	22155					0.0904392713028983
IVIKLVDPE	9	Unmodified	_IVIKLVDPE_					0	0	0			REV__ENSG00000174197|ENST00000703841|MGA	REV__ENSG00000174197|ENST00000703841|MGA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3181762695312	2	513.3157	1024.61685	-0.34905	-0.00017917	2.3674	0.0012152	2.0183	0.001036	513.8184615031363	53.608	1.3919	53.546	53.049	54.441	-0.062065					64	37	3	0	0	0	0.78058	1	4396	4396		30.504	0	1	277190	+		19160	21979	12917	12926	22156	22156					0.10552370796949617
IVILGLSYAN	10	Unmodified	_IVILGLSYAN_					0	0	0		nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	nc|ENSG00000113569|O75694-2|NUP155	nc|ENSG00000113569|O75694-2|NUP155	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8169555664062	2	531.813325	1061.6121	3.2614	0.0017345	3.9718	0.0021123	7.2332	0.0038467	531.8152553069001	101.24	0.81892	101.19	100.8	101.62	-0.049828					49	19	4	0	0	0	0.85939	1	11034	11034		23.042	1.0826	1	580610			19161	2728	12918	12927	22157	22157					0.08375486654176711
IVILLLVDVV	10	Unmodified	_IVILLLVDVV_					0	0	0		nc|ENSG00000274391|P56180-4|TPTE;nc|ENSG00000274391|P56180-3|TPTE;nc|ENSG00000274391|P56180-2|TPTE;ENSG00000274391|ENST00000618007|TPTE	nc|ENSG00000274391|P56180-4|TPTE	nc|ENSG00000274391|P56180-4|TPTE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3739013671875	2	548.373018	1094.73148	-0.40061	-0.00021968	2.6599	0.0014586	2.2593	0.001239	548.374255411481	36.732	0.62341	36.714	36.286	36.91	-0.018677					36	13	4	0	0	0	0.8488	1	2382	2382		17.365	5.1581	1	310410			19162	8996	12919	12928	22158	22158					0.18790680278880245
IVILLLVDVV	10	Unmodified	_IVILLLVDVV_					0	0	0		nc|ENSG00000274391|P56180-4|TPTE;nc|ENSG00000274391|P56180-3|TPTE;nc|ENSG00000274391|P56180-2|TPTE;ENSG00000274391|ENST00000618007|TPTE	nc|ENSG00000274391|P56180-4|TPTE	nc|ENSG00000274391|P56180-4|TPTE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3736572265625	2	548.373018	1094.73148	-0.014191	-7.7821E-06	2.2319	0.0012239	2.2178	0.0012162	548.374000997207	35.509	1.288	35.453	35.002	36.29	-0.055901					73	28	3	0	0	0	0.86305	1	2347	2347		31.955	4.0726	1	330260			19163	8996	12919	12928	22159	22159					0.18790680278880245
IVILLLVDVV	10	Unmodified	_IVILLLVDVV_					0	0	0		nc|ENSG00000274391|P56180-4|TPTE;nc|ENSG00000274391|P56180-3|TPTE;nc|ENSG00000274391|P56180-2|TPTE;ENSG00000274391|ENST00000618007|TPTE	nc|ENSG00000274391|P56180-4|TPTE	nc|ENSG00000274391|P56180-4|TPTE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.373779296875	2	548.373018	1094.73148	-0.26655	-0.00014617	2.6931	0.0014768	2.4265	0.0013306	548.374310727377	37.412	2.4822	37.359	36.203	38.685	-0.053558					161	55	4	0	0	0	0.88106	1	2485	2485		12.207	4.5166	1	654980			19164	8996	12919	12928	22160	22160					0.18790680278880245
IVILPTLFM	9	Oxidation (M)	_IVILPTLFM(Oxidation (M))_		IVILPTLFM(1)		IVILPTLFM(41)	0	0	1		ENST00000378565.9_1_13:48830463-48832280:+|nuORF	ENST00000378565.9_1_13:48830463-48832280:+|nuORF	ENST00000378565.9_1_13:48830463-48832280:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8169555664062	2	531.817021	1061.61949	1.0704	0.00056928	-1.2309	-0.00065462	-0.16046	-8.5335E-05	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.69914	1	10298	10298		40.573	7.057	1	4490200			19165	10870	12920	12929	22161	22161		180			0.09114502930242452
IVILTLPLGI	10	Unmodified	_IVILTLPLGI_					0	0	0			REV__nc|ENSG00000141458|O15118-2|NPC1	REV__nc|ENSG00000141458|O15118-2|NPC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3609619140625	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.8488	1	2228	2228		17.365	0.89182	1	2871800	+		19166	19688	12921	12930	22162	22162					0.1819441110740172
IVILTLPLGI	10	Unmodified	_IVILTLPLGI_					0	0	0			REV__nc|ENSG00000141458|O15118-2|NPC1	REV__nc|ENSG00000141458|O15118-2|NPC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.36181640625	2	526.359911	1050.70527	0.76967	0.00040513	1.4348	0.00075522	2.2045	0.0011603	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.85939	1	2294	2294		23.042	0	1	7968500	+		19167	19688	12921	12930	22163	22163					0.1819441110740172
IVINNLIL	8	Unmodified	_IVINNLIL_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-5|VPS13B;nc|ENSG00000132549|Q7Z7G8-4|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3008728027344	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.86288	1	2020	2020		26.796	1.3459	1	1220600			19168	3805	12922	12931	22164	22164					0.1262842283365444
IVIRKPVPV	9	Unmodified	_IVIRKPVPV_					0	0	0			REV__ENSG00000105675|ENST00000262623|ATP4A	REV__ENSG00000105675|ENST00000262623|ATP4A	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.8542175292969	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.49	1	118.46	117.96	118.96	-0.024208								0	0	0	0.33676	1	13125	13125		18.324	4.5491	1		+		19169	17561	12923	12932	22165	22165					0.1764807988731718
IVISLTLTT	9	Unmodified	_IVISLTLTT_					0	0	0		nc|ENSG00000160325|Q9UGQ2-2|CACFD1;ENSG00000160325|ENST00000316948|CACFD1;nc|ENSG00000160325|Q9UGQ2-3|CACFD1;nc|ENSG00000160325|Q9UGQ2-4|CACFD1	nc|ENSG00000160325|Q9UGQ2-2|CACFD1	nc|ENSG00000160325|Q9UGQ2-2|CACFD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8015441894531	2	480.802426	959.590298	-0.92578	-0.00044512	-2.1904	-0.0010531	-3.1161	-0.0014982	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.7932	1	9716	9716		23.042	1.0826	1	7439400			19170	5581	12924	12933	22166	22166					0.10888681905601061
IVISLTLTT	9	Unmodified	_IVISLTLTT_					0	0	0		nc|ENSG00000160325|Q9UGQ2-2|CACFD1;ENSG00000160325|ENST00000316948|CACFD1;nc|ENSG00000160325|Q9UGQ2-3|CACFD1;nc|ENSG00000160325|Q9UGQ2-4|CACFD1	nc|ENSG00000160325|Q9UGQ2-2|CACFD1	nc|ENSG00000160325|Q9UGQ2-2|CACFD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8008728027344	2	480.802426	959.590298	0.73477	0.00035328	-4.0825	-0.0019629	-3.3477	-0.0016096	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.78536	1	9977	9977		29.15	4.6455	1	18148000			19171	5581	12924	12933	22167	22167					0.10888681905601061
IVITVLLFGVS	11	Unmodified	_IVITVLLFGVS_					0	0	0			REV__ENSG00000144452|ENST00000272895|ABCA12	REV__ENSG00000144452|ENST00000272895|ABCA12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8661499023438	2	580.8681	1159.72165	-0.68716	-0.00039915	-2.6227	-0.0015234	-3.3098	-0.0019226	580.8664418786329	78.579	1.3049	79.142	78.537	79.842	0.56332					71	30	3	0	0	0	0.7342	1	8984	8984		25.574	1.0549	1	1961100	+		19172	19890	12925	12934	22168	22168					0.14817492273527932
IVKELYSII	9	Unmodified	_IVKELYSII_					0	0	0			REV__ENST00000552433.1_1_12:51449621-51449846:+|nuORF	REV__ENST00000552433.1_1_12:51449621-51449846:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	539.7449340820312	2	539.33135	1076.64815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.8	1	74.8	74.3	75.3	0								0	0	0	0.29475	1	6755	6755		32.812	4.9302	1		+		19173	16376	12926	12935	22169	22169					0.11288943831027609
IVKHIRKK	8	Unmodified	_IVKHIRKK_					0	0	0		ENSG00000179213|ENST00000601727|SIGLECL1	ENSG00000179213|ENST00000601727|SIGLECL1	ENSG00000179213|ENST00000601727|SIGLECL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.83770751953125	2	511.353286	1020.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.32	1	113.32	112.82	113.82	0								0	0	0	0.31173	1	11710	11710		5.0869	0.40514	1				19174	7255	12927	12936	22170	22170					0.1825001783869311
IVKHLKGS	8	Unmodified	_IVKHLKGS_					0	0	0		ENST00000511154.5_1_19:54041514-54074864:+|nuORF	ENST00000511154.5_1_19:54041514-54074864:+|nuORF	ENST00000511154.5_1_19:54041514-54074864:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.28436279296875	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.81	1	40.764	40.264	41.264	-0.045467								0	0	0	0.30478	1	2614	2614		17.365	3.5896	1				19175	13014	12928	12937	22171	22171					0.10438385376664883
IVKIAKNREF	10	Unmodified	_IVKIAKNREF_					0	0	0			REV__ENSG00000126353|ENST00000246657|CCR7	REV__ENSG00000126353|ENST00000246657|CCR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.58331298828125	3	406.583674	1216.72919	3.1806	0.0012932	-2.547	-0.0010356	0.6336	0.00025761	406.5823777958884	112.82	1.2516	112.85	112.71	113.96	0.028854					79	33	3	0	0	0	0.85441	1	12345	12345		20.837	3.004	1	2434900	+		19176	18700	12929	12938	22172	22172					0.1294964459377752
IVKKGLPGLKG	11	Unmodified	_IVKKGLPGLKG_					0	0	0		ENSG00000197565|ENST00000334504|COL4A6;nc|ENSG00000197565|Q14031|COL4A6	ENSG00000197565|ENST00000334504|COL4A6	ENSG00000197565|ENST00000334504|COL4A6	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.6740112304688	2	555.373884	1108.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.12	1	108.07	107.57	108.57	-0.042404								0	0	0	0.56276	1	11783	11783		31.53	14.062	1				19177	8176	12930	12939	22173	22173					0.18319734087504003
IVKKTNETK	9	Unmodified	_IVKKTNETK_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-4|MYH14;REV__ENSG00000100345|ENST00000216181|MYH9;REV__nc|ENSG00000133026|P35580|MYH10	REV__nc|ENSG00000105357|Q7Z406-4|MYH14	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8216552734375	2	530.821681	1059.62881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.557	1	84.704	84.204	85.204	0.14793								0	0	0	0.31117	1	8238	8238		26.693	1.2427	1		+		19178	17528;17175;19050	12931	12940	22174	22174					0.10137987540110771
IVKLKVFM	8	Unmodified	_IVKLKVFM_					0	0	0			REV__ENSG00000163933|ENST00000296292|RFT1	REV__ENSG00000163933|ENST00000296292|RFT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.31390380859375	2	489.314449	976.614345	0.74244	0.00036329	-1.5302	-0.00074874	-0.78774	-0.00038545	489.31357671655405	95.118	2.0089	95.281	94.826	96.835	0.16308					112	47	4	0	0	0	0.82419	1	9731	9731		13.775	0.81615	1	1396400	+		19179	20999	12932	12941	22175	22175					0.1251024385828714
IVKLLKKIGSI	11	Unmodified	_IVKLLKKIGSI_					0	0	0		ENST00000369475.7_1_6:89650800-89650860:-|nuORF	ENST00000369475.7_1_6:89650800-89650860:-|nuORF	ENST00000369475.7_1_6:89650800-89650860:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	606.1751708984375	2	606.426116	1210.83768	-0.25491	-0.00015458	2.1245	0.0012883	1.8696	0.0011338	606.4268870170132	53.895	0.12531	54.479	54.376	54.501	0.58474					4	2	2	0	0	0	0.18058	1	5473	5473		5.9211	2.9917	1	45145			19180	10618	12933	12942	22176	22176					0.2406943584421697
IVKLLLSYGAS	11	Unmodified	_IVKLLLSYGAS_					0	0	0		nc|ENSG00000138376|Q99728-3|BARD1;nc|ENSG00000138376|Q99728-2|BARD1;ENSG00000138376|ENST00000260947|BARD1	nc|ENSG00000138376|Q99728-3|BARD1	nc|ENSG00000138376|Q99728-3|BARD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3567504882812	2	582.355357	1162.69616	0.16989	9.8934E-05	-3.1776	-0.0018505	-3.0077	-0.0017515	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.73893	1	12502	12502		24.519	5.4157	1	635410			19181	4290	12934	12943	22177	22177					0.12132017751082458
IVKLLLSYGAS	11	Unmodified	_IVKLLLSYGAS_					0	0	0		nc|ENSG00000138376|Q99728-3|BARD1;nc|ENSG00000138376|Q99728-2|BARD1;ENSG00000138376|ENST00000260947|BARD1	nc|ENSG00000138376|Q99728-3|BARD1	nc|ENSG00000138376|Q99728-3|BARD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3536987304688	2	582.355357	1162.69616	0.72244	0.00042072	-3.9804	-0.002318	-3.258	-0.0018973	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.50531	2	11293	11293;11368		51.528	3.8704	1	132960000			19182	4290	12934	12943	22178;22179	22178					0.12132017751082458
IVKRAPLVREP	11	Unmodified	_IVKRAPLVREP_					0	0	0		nc|ENSG00000177663|Q96F46-2|IL17RA;ENSG00000177663|ENST00000319363|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.30291748046875	3	426.60659	1276.79794	0.034936	1.4904E-05	1.0582	0.00045145	1.0932	0.00046635	426.60694416474234	64.922	0.20419	65.308	65.151	65.355	0.38615					6	4	2	0	0	0	0.17243	1	7020	7020		28.577	1.5294	1	39781			19183	7152	12935	12944	22180	22180					0.1706130889351698
IVKSTVQLWWR	11	Unmodified	_IVKSTVQLWWR_					0	0	0			REV__nc|ENSG00000006576|Q8N3S3-6|PHTF2	REV__nc|ENSG00000006576|Q8N3S3-6|PHTF2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2904357910156	3	472.610111	1414.8085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.36	1	116.42	115.92	116.92	0.059448								0	0	0	0.56276	1	12358	12358		6.6596	0.65857	1		+		19184	16104	12936	12945	22181	22181					0.11769291547921057
IVKTTSRTF	9	Unmodified	_IVKTTSRTF_					0	0	0		ENST00000496390.5_1_X:153928333-153979808:-|nuORF;nc|ENSG00000160219|Q8WWW8-3|GAB3;nc|ENSG00000160219|Q8WWW8|GAB3;ENSG00000160219|ENST00000424127|GAB3	ENST00000496390.5_1_X:153928333-153979808:-|nuORF	ENST00000496390.5_1_X:153928333-153979808:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3086547851562	2	526.808574	1051.60259	2.2818	0.0012021	-3.2431	-0.0017085	-0.96136	-0.00050645	526.8065659132963	103.16	0.35849	103.39	103.23	103.59	0.22556					11	8	2	0	0	0	0.69914	1	12538	12538		40.573	5.3719	1	270770			19185	5569	12937	12946	22182	22182					0.07885718368652306
IVKYTILQQFT	11	Unmodified	_IVKYTILQQFT_					0	0	0			REV__nc|ENSG00000114062|Q05086-2|UBE3A	REV__nc|ENSG00000114062|Q05086-2|UBE3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9328308105469	3	451.930739	1352.77039	2.5866	0.001169	1.6869	0.00076237	4.2735	0.0019313	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.7896	1	11046	11046		13.508	0.55046	1	1152500	+		19186	18028	12938	12947	22183	22183					0.1081136084260379
IVLALLLVIE	10	Unmodified	_IVLALLLVIE_					0	0	0			REV__ENSG00000112149|ENST00000379153|CD83	REV__ENSG00000112149|ENST00000379153|CD83	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3739013671875	2	548.373018	1094.73148	-0.47019	-0.00025784	2.7651	0.0015163	2.2949	0.0012584	548.3743331690392	35.442	1.0652	35.43	35	36.065	-0.012203					66	23	4	0	0	0	0.90957	1	2248	2248		7.6903	0.49693	1	555000	+		19187	17919	12939	12948	22184	22184					0.18790680278902983
IVLALLLVIE	10	Unmodified	_IVLALLLVIE_					0	0	0			REV__ENSG00000112149|ENST00000379153|CD83	REV__ENSG00000112149|ENST00000379153|CD83	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.373779296875	2	548.373018	1094.73148	-0.014191	-7.7821E-06	2.2319	0.0012239	2.2178	0.0012162	548.374000997207	35.509	1.288	35.453	35.002	36.29	-0.055901					73	28	3	0	0	0	0.8488	1	2305	2305		17.365	5.1581	1	330260	+		19188	17919	12939	12948	22185	22185					0.18790680278902983
IVLALLLVIE	10	Unmodified	_IVLALLLVIE_					0	0	0			REV__ENSG00000112149|ENST00000379153|CD83	REV__ENSG00000112149|ENST00000379153|CD83	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3740844726562	2	548.373018	1094.73148	-0.26655	-0.00014617	2.6931	0.0014768	2.4265	0.0013306	548.374310727377	37.412	2.4822	37.359	36.203	38.685	-0.053558					161	55	4	0	0	0	0.90957	2	2510	2510;2654		7.6903	0	1	654980	+		19189	17919	12939	12948	22186;22187	22186					0.18790680278902983
IVLARVPKKL	10	Unmodified	_IVLARVPKKL_					0	0	0		ENST00000488906.1_1_17:45236559-45237015:-|nuORF	ENST00000488906.1_1_17:45236559-45237015:-|nuORF	ENST00000488906.1_1_17:45236559-45237015:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8533325195312	2	568.897526	1135.7805	-0.36197	-0.00020593	-4.1261	-0.0023473	-4.4881	-0.0025533	568.8953784304525	102.65	0.31834	102.65	102.47	102.79	0					11	7	2	0	0	0	0.37624	1	10508	10508		35.618	22.659	1	62220			19190	12641	12940	12949	22188	22188					0.21804013358519114
IVLARVPKKL	10	Unmodified	_IVLARVPKKL_					0	0	0		ENST00000488906.1_1_17:45236559-45237015:-|nuORF	ENST00000488906.1_1_17:45236559-45237015:-|nuORF	ENST00000488906.1_1_17:45236559-45237015:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8532104492188	2	568.897526	1135.7805	0.87011	0.000495	2.7253	0.0015504	3.5954	0.0020454	568.8983241423949	102.15	0.59013	102.29	101.98	102.57	0.13523					21	14	3	0	0	0	0.37624	1	10768	10768		30.504	24.191	1	166310			19191	12641	12940	12949	22189	22189					0.21804013358519114
IVLCFLTLL	9	Unmodified	_IVLCFLTLL_					0	0	0		ENSG00000047597|ENST00000378616|XK	ENSG00000047597|ENST00000378616|XK	ENSG00000047597|ENST00000378616|XK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	517.8189086914062	2	517.819564	1033.62458	2.0914	0.001083	-3.0284	-0.0015682	-0.937	-0.0004852	517.8178511070294	93.15	1.5079	93.088	92.634	94.142	-0.06144					97	35	4	0	0	0	0.69914	1	9877	9877		40.573	0	1	1071700			19192	963	12941	12950	22190	22190					0.10910806792867334
IVLDALEQ	8	Unmodified	_IVLDALEQ_					0	0	0		ENSG00000144746|ENST00000273258|ARL6IP5	ENSG00000144746|ENST00000273258|ARL6IP5	ENSG00000144746|ENST00000273258|ARL6IP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7546691894531	2	450.755475	899.496398	-1.264	-0.00056978	-1.5875	-0.00071559	-2.8516	-0.0012854	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.87479	1	7811	7811		30.504	1.3541	1	414240			19193	4729	12942	12951	22191	22191					0.042629628033296285
IVLDGRHLPLN	11	Unmodified	_IVLDGRHLPLN_					0	0	0			REV__ENSG00000107554|ENST00000324109|DNMBP	REV__ENSG00000107554|ENST00000324109|DNMBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	623.8717651367188	2	623.866954	1245.71936	2.9437	0.0018365	2.5539	0.0015933	5.4976	0.0034297	623.8684944495797	104.68	1.864	104.64	104.19	106.05	-0.04039					120	44	4	0	0	0	0.72106	1	11514	11514		28.081	4.5588	1	1509700	+		19194	17661	12943	12952	22192	22192					0.10632456588427885
IVLDGRHLPLN	11	Unmodified	_IVLDGRHLPLN_					0	0	0			REV__ENSG00000107554|ENST00000324109|DNMBP	REV__ENSG00000107554|ENST00000324109|DNMBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.8709716796875	2	623.866954	1245.71936	1.336	0.00083349	4.1968	0.0026182	5.5328	0.0034517	623.8694839910095	104.33	2.0015	104.5	104.05	106.06	0.17096					147	50	4	0	0	0	0.73893	1	11072	11072		24.519	0.99649	1	2830400	+		19195	17661	12943	12952	22193	22193					0.10632456588427885
IVLDKCIH	8	Unmodified	_IVLDKCIH_					0	0	0			REV__nc|ENSG00000147852|P98155-2|VLDLR	REV__nc|ENSG00000147852|P98155-2|VLDLR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7696228027344	2	470.767863	939.521173	-0.45506	-0.00021423	2.8694	0.0013508	2.4143	0.0011366	470.7691067247387	52.317	1.9749	52.984	52.189	54.164	0.6673					112	47	4	0	0	0	0.92176	1	5301	5301		46.766	2.2354	1	18701000	+		19196	20087	12944	12953	22194	22194					0.04899319405046754
IVLDTLSTL	9	Unmodified	_IVLDTLSTL_					0	0	0			REV__ENSG00000137269|ENST00000370888|LRRC1	REV__ENSG00000137269|ENST00000370888|LRRC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.79083251953125	2	487.792058	973.569563	-0.085472	-4.1693E-05	-2.8417	-0.0013862	-2.9272	-0.0014279	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.72402	1	8664	8664		38.806	5.2906	1	1889700	+		19197	19374	12945	12954	22195	22195					0.08172091525955238
IVLESPLEL	9	Unmodified	_IVLESPLEL_					0	0	0		ENST00000367498.7_1_1:185280308-185280401:-|nuORF	ENST00000367498.7_1_1:185280308-185280401:-|nuORF	ENST00000367498.7_1_1:185280308-185280401:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8018493652344	2	506.799883	1011.58521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.531	1	43.481	42.981	43.981	-0.050308								0	0	0	0.31472	1	3004	3004		25.45	2.4077	1				19198	10548	12946	12955	22196	22196					0.07988378043000921
IVLGGVAGLL	10	Unmodified	_IVLGGVAGLL_					0	0	0		ENST00000437800.6_1_12:6925109-6928492:+|nuORF;ENSG00000010610|ENST00000011653|CD4	ENST00000437800.6_1_12:6925109-6928492:+|nuORF	ENST00000437800.6_1_12:6925109-6928492:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3008728027344	2	456.299853	910.585153	0.067738	3.0909E-05	2.1767	0.00099321	2.2444	0.0010241	456.3007392849424	46.706	1.5961	46.702	46.112	47.708	-0.0041618					92	43	3	0	0	0	0.85976	1	3786	3786		35.201	8.4046	1	327340			19199	770	12947	12956	22197	22197					0.1262842283365444
IVLGIFIKY	9	Unmodified	_IVLGIFIKY_					0	0	0		ENSG00000180245|ENST00000317735|RRH	ENSG00000180245|ENST00000317735|RRH	ENSG00000180245|ENST00000317735|RRH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3402099609375	2	533.338978	1064.6634	-0.032114	-1.7128E-05	2.4107	0.0012857	2.3786	0.0012686	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.7932	1	10623	10623		24.203	1.1603	1	2530900			19200	7319	12948	12957	22198	22198					0.133658554188969
IVLIIFTIC	9	Unmodified	_IVLIIFTIC_					0	0	0		ENSG00000171659|ENST00000378142|GPR34	ENSG00000171659|ENST00000378142|GPR34	ENSG00000171659|ENST00000378142|GPR34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	517.8186645507812	2	517.819564	1033.62458	0.9943	0.00051487	-1.8394	-0.00095247	-0.84509	-0.0004376	517.81845543952	93.057	1.5114	93.102	92.582	94.093	0.045448					101	35	5	0	0	0	0.7932	1	9740	9740		26.796	0	1	1083300			19201	6694	12949	12958	22199	22199					0.10910806792890071
IVLLAHRLRRW	11	Unmodified	_IVLLAHRLRRW_					0	0	0		nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;ENSG00000081853|ENST00000394576|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.6370544433594	3	478.305245	1431.89391	-0.88095	-0.00042136	-4.2353	-0.0020258	-5.1163	-0.0024471	478.30312855267334	66.875	1.0299	67.008	66.517	67.547	0.13326					107	42	3	0	0	0	0.80361	1	5979	5979		10.587	2.1795	1	324080			19202	1472	12950	12959	22200	22200					0.19523501524236053
IVLLEHLKT	9	Unmodified	_IVLLEHLKT_					0	0	0		ENSG00000162408|ENST00000377705|NOL9;ENST00000460777.1_1_1:6609570-6610501:-|nuORF;ENST00000464665.1_1_1:6609570-6614245:-|nuORF	ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.3399658203125	2	533.336967	1064.65938	3.0971	0.0016518	2.9068	0.0015503	6.0039	0.0032021	533.3384140007198	99.339	2.8367	99.285	98.69	101.53	-0.053741					182	66	5	0	0	0	0.78124	1	10697	10697		30.318	2.4355	1	3163800			19203	5685	12951	12960	22201	22201					0.12963765925201187
IVLLHCFLWPL	11	Unmodified	_IVLLHCFLWPL_					0	0	0		ENSG00000135643|ENST00000258111|KCNMB4	ENSG00000135643|ENST00000258111|KCNMB4	ENSG00000135643|ENST00000258111|KCNMB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.93243408203125	3	451.929905	1352.76789	2.3813	0.0010762	3.8023	0.0017184	6.1836	0.0027945	451.9315121357165	99.085	2.2621	99.03	97.603	99.866	-0.054817					133	52	3	0	0	0	0.75544	1	10687	10687		20.837	0.52214	1	545200			19204	4043	12952	12961	22202	22202					0.10561233903945322
IVLLQGVP	8	Unmodified	_IVLLQGVP_					0	0	0			REV__ENST00000344756.8_1_7:155100385-155100712:+|nuORF	REV__ENST00000344756.8_1_7:155100385-155100712:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.77447509765625	2	419.773471	837.53239	-0.61524	-0.00025826	4.1706	0.0017507	3.5554	0.0014924	419.77510623203386	52.301	1.7898	52.227	50.978	52.768	-0.074509					74	52	2	0	0	0	0.80963	1	4230	4230		15.636	0.97212	1	183680	+		19205	25306	12953	12962	22203	22203					0.10712464770847419
IVLLSALDS	9	Unmodified	_IVLLSALDS_					0	0	0		nc|ENSG00000168126|Q8NHA6|OR2W6P	nc|ENSG00000168126|Q8NHA6|OR2W6P	nc|ENSG00000168126|Q8NHA6|OR2W6P	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7776794433594	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.416	1	79.416	78.916	79.916	0								0	0	0	0.32159	1	7305	7305		23.042	0	1				19206	15078	12954	12963	22204	22204					0.07575822354453976
IVLLVILLAE	10	Unmodified	_IVLLVILLAE_					0	0	0		ENSG00000011105|ENST00000011898|TSPAN9	ENSG00000011105|ENST00000011898|TSPAN9	ENSG00000011105|ENST00000011898|TSPAN9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.37353515625	2	548.373018	1094.73148	-0.47019	-0.00025784	2.7651	0.0015163	2.2949	0.0012584	548.3743331690392	35.442	1.0652	35.43	35	36.065	-0.012203					66	23	4	0	0	0	0.88106	1	2207	2207		12.207	0.69583	1	555000			19207	779	12955	12964	22205	22205					0.18790680278880245
IVLNWRKP	8	Unmodified	_IVLNWRKP_					0	0	0		ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A	ENSG00000042781|ENST00000307340|USH2A	ENSG00000042781|ENST00000307340|USH2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3184204101562	2	513.316369	1024.61818	-0.38756	-0.00019894	1.1387	0.00058453	0.75117	0.00038559	513.3170376628356	53.655	1.47	53.703	53.107	54.577	0.047802					76	53	2	0	0	0	0.91005	1	4395	4395		42.474	8.3019	1	209860			19208	938	12956	12965	22206	22206					0.10686049676360199
IVLRQVIERI	10	Unmodified	_IVLRQVIERI_					0	0	0			REV__ENSG00000116991|ENST00000674635|SIPA1L2	REV__ENSG00000116991|ENST00000674635|SIPA1L2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7660217285156	3	413.602957	1237.78704	-1.4188	-0.0005868	4.4615	0.0018453	3.0427	0.0012585	413.6047259124672	40.251	0.61586	40.84	40.598	41.214	0.58916					31	16	3	0	0	0	0.37624	1	3490	3490		15.333	5.2292	1	274410	+		19209	18239	12957	12966	22207	22207					0.17765906519230157
IVLSITKLKE	10	Unmodified	_IVLSITKLKE_					0	0	0			REV__nc|ENSG00000178209|Q15149-7|PLEC	REV__nc|ENSG00000178209|Q15149-7|PLEC	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	572.0335693359375	2	572.371007	1142.72746	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.681	1	67.741	67.241	68.241	0.059288								0	0	0	0.45132	1	6041	6041		29.17	3.596	1		+		19210	22265	12958	12967	22208	22208					0.16180590785165805
IVLSTLMKSA	10	Unmodified	_IVLSTLMKSA_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8167724609375	2	531.81501	1061.61547	1.0705	0.00056928	2.5512	0.0013568	3.6216	0.001926	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.8651	1	10322	10322		25.574	0.12388	1	4490200	+		19211	22442	12959	12968	22209	22209					0.08712413436569477
IVLSVLMSIN	10	Unmodified	_IVLSVLMSIN_					0	0	0			REV__nc|ENSG00000186335|Q495M3-2|SLC36A2	REV__nc|ENSG00000186335|Q495M3-2|SLC36A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.3327026367188	2	544.822835	1087.63112	1.1758	0.00064059	2.4085	0.0013122	3.5843	0.0019528	545.3258006400439	98.261	1.0652	98.638	98.123	99.188	0.37679					32	25	2	0	0	0	0.37624	1	11824	11824		31.53	0	1	239750	+		19212	22845	12960	12969	22210	22210					0.09080699953597104
IVLYIFKLT	9	Unmodified	_IVLYIFKLT_					0	0	0		ENSG00000117528|ENST00000370214|ABCD3;nc|ENSG00000117528|P28288-2|ABCD3;nc|ENSG00000117528|P28288-3|ABCD3	ENSG00000117528|ENST00000370214|ABCD3	ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.353759765625	2	555.352086	1108.68962	1.5834	0.00087937	0.9575	0.00053175	2.5409	0.0014111	555.3524993853406	100.59	1.0891	100.89	100.45	101.54	0.2999					67	28	3	0	0	0	0.76255	1	12198	12198		35.618	6.4687	1	1093500			19213	2985	12961	12970	22211	22211					0.13962124590375424
IVMIMGELY	9	Unmodified	_IVMIMGELY_					0	0	0			REV__ENSG00000161040|ENST00000440067|FBXL13	REV__ENSG00000161040|ENST00000440067|FBXL13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.7766723632812	2	534.777039	1067.53953	0.45174	0.00024158	0.33136	0.0001772	0.7831	0.00041878	534.7769200401495	64.351	0.73689	64.317	64.026	64.763	-0.034256					41	19	3	0	0	0	0.76996	1	6156	6156		33.516	1.5607	1	265100	+		19214	20761	12962	12971	22212	22212					0.008456932647732174
IVMKKTHVA	9	Unmodified	_IVMKKTHVA_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.807861328125	2	513.810062	1025.60557	-0.57846	-0.00029722	-1.0066	-0.00051719	-1.585	-0.00081441	513.8095113148362	46.467	0.72382	47.39	47.191	47.915	0.92315					30	16	2	0	0	0	0.28875	1	4432	4432		65.803	15.779	1	5287500	+		19215	20437;29946	12963	12972	22213	22213					0.09379270221802471
IVMLLGPVGFA	11	Unmodified	_IVMLLGPVGFA_					0	0	0			REV__nc|ENSG00000163406|Q16348-2|SLC15A2	REV__nc|ENSG00000163406|Q16348-2|SLC15A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.8287963867188	2	558.827921	1115.64129	0.050658	2.8309E-05	-0.69724	-0.00038964	-0.64658	-0.00036133	558.827346664337	65.575	0.73492	65.54	65.252	65.986	-0.034798					94	39	3	0	0	0	0.63354	1	6287	6287		40.573	16.37	1	4755700	+		19216	20913	12964	12973	22214	22214					0.08809307678825462
IVMLLGPVGFA	11	Unmodified	_IVMLLGPVGFA_					0	0	0			REV__nc|ENSG00000163406|Q16348-2|SLC15A2	REV__nc|ENSG00000163406|Q16348-2|SLC15A2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	558.827921	1115.64129	-0.95261	-0.00053234	0.06955	3.8867E-05	-0.88306	-0.00049348	558.8278734595748	65.847	0.41501	65.847	65.541	65.956	0	0.18575	0.00067748	NaN	40.573	38	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	548720	+		19217	20913	12964	12973							0.08809307678825462
IVMLLGPVGFA	11	Unmodified	_IVMLLGPVGFA_					0	0	0			REV__nc|ENSG00000163406|Q16348-2|SLC15A2	REV__nc|ENSG00000163406|Q16348-2|SLC15A2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	558.827921	1115.64129	0.3095	0.00017296	-0.74904	-0.00041859	-0.43954	-0.00024563	558.8273061759046	65.517	0.96186	65.647	65.061	66.023	0.12996	-0.014508	-0.00023743	NaN	40.573	84	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1880600	+		19218	20913	12964	12973							0.08809307678825462
IVMLPDNQS	9	Unmodified	_IVMLPDNQS_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.756591796875	2	508.757692	1015.50083	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.13	1	70.514	70.014	71.014	0.38416								0	0	0	0.35068	1	7761	7761		60.972	5.4677	1				19219	4728	12965	12974	22215	22215					-0.00629896045404621
IVMVNNKL	8	Unmodified	_IVMVNNKL_					0	0	0			REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7778015136719	2	465.775688	929.536823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.477	1	80.418	79.918	80.918	-0.059692								0	0	0	0.30316	1	8088	8088		42.474	3.6683	1		+		19220	21450	12966	12975	22216	22216					0.06923605922111165
IVNFITAHG	9	Unmodified	_IVNFITAHG_					0	0	0		ENST00000495736.1_1_7:129986419-130007427:+|nuORF;nc|ENSG00000158525|Q8WXQ8-2|CPA5;nc|ENSG00000158525|Q8WXQ8-3|CPA5;chr7:130367571-130368410|28|89.54|0.14|9.3|+|ENST00000431780|CPA5,CPA5;ENSG00000158525|ENST00000474905|CPA5	ENST00000495736.1_1_7:129986419-130007427:+|nuORF	ENST00000495736.1_1_7:129986419-130007427:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.2670593261719	2	486.269084	970.523616	-0.74239	-0.000361	-3.432	-0.0016689	-4.1744	-0.0020299	486.2673170980509	86.118	3.9821	86.565	85.471	89.453	0.44736					252	97	4	0	0	0	0.62081	1	10044	10044		45.952	3.5558	1	1474100			19221	490	12967	12976	22217	22217					0.03717491134352713
IVNFVHTNL	9	Unmodified	_IVNFVHTNL_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.792724609375	2	528.795466	1055.57638	-0.29217	-0.0001545	-3.6456	-0.0019278	-3.9377	-0.0020823	528.7934265407783	36.279	1.2558	36.223	35.879	37.135	-0.055904					72	27	4	0	0	0	0.76255	1	2456	2456		35.618	0	1	1444600			19222	6934	12968	12977	22218	22218					0.050814491971550524
IVNKPLLIRR	10	Unmodified	_IVNKPLLIRR_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3558349609375	2	611.411332	1220.80811	-1.2523	-0.0007657	-0.67963	-0.00041553	-1.932	-0.0011812	611.4108612370992	95.826	0.29823	96.028	95.891	96.19	0.20242					10	6	2	0	0	0	0.37624	1	9788	9788		14.137	11.419	1	48696	+		19223	23043	12969	12978	22219	22219					0.20653916618721269
IVNKRPRGIN	10	Unmodified	_IVNKRPRGIN_					0	0	0			REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	583.8572387695312	2	583.859464	1165.70437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.06	1	100.06	99.556	100.56	0								0	0	0	0.45132	1	10133	10133		34.173	9.6534	1		+		19224	21876	12970	12979	22220	22220					0.12815009511086828
IVNKRPRGIN	10	Unmodified	_IVNKRPRGIN_					0	0	0			REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.8582763671875	2	583.859464	1165.70437	2.8156	0.0016439	-3.8035	-0.0022207	-0.98785	-0.00057677	583.8570467437777	98.7	2.5935	98.645	98.156	100.75	-0.054817					154	59	5	0	0	0	0.86763	1	10692	10692		26.693	7.5894	1	1920100	+		19225	21876	12970	12979	22221	22221					0.12815009511086828
IVNKRPRGIN	10	Unmodified	_IVNKRPRGIN_					0	0	0			REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.8583984375	2	583.859464	1165.70437	-0.018036	-1.053E-05	-0.86778	-0.00050666	-0.88582	-0.00051719	583.8586981991532	98.483	2.4194	98.532	98.099	100.52	0.048157					136	55	4	0	0	0	0.85934	1	10499	10499		35.618	0.46626	1	1823400	+		19226	21876	12970	12979	22222	22222					0.12815009511086828
IVNNLYIDSL	10	Unmodified	_IVNNLYIDSL_					0	0	0			REV__ENSG00000196935|ENST00000355086|SRGAP1	REV__ENSG00000196935|ENST00000355086|SRGAP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.868896484375	2	582.318971	1162.62339	0.18312	0.00010663	4.4418	0.0025865	4.6249	0.0026932	582.32143278326	102.18	0.73471	102.22	101.97	102.71	0.043198					25	17	2	0	0	0	0.37624	1	11070	11070		44.377	5.1244	1	99016	+		19227	23182	12971	12980	22223	22223					0.04858263957657982
IVNNPDVRP	9	Unmodified	_IVNNPDVRP_					0	0	0		ENSG00000133687|ENST00000539277|TMTC1	ENSG00000133687|ENST00000539277|TMTC1	ENSG00000133687|ENST00000539277|TMTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.2820434570312	2	512.282723	1022.55089	0.68771	0.0003523	-3.3979	-0.0017407	-2.7102	-0.0013884	512.280910573943	86.397	3.3825	86.546	85.297	88.68	0.14902					148	79	2	0	0	0	0.51592	1	8502	8502		51.193	7.0759	1	371240			19228	3888	12972	12981	22224	22224					0.0405197467475773
IVNNVLRF	8	Unmodified	_IVNNVLRF_					0	0	0		nc|ENSG00000135299|Q9Y2G4-4|ANKRD6	nc|ENSG00000135299|Q9Y2G4-4|ANKRD6	nc|ENSG00000135299|Q9Y2G4-4|ANKRD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7912292480469	2	487.792727	973.5709	-1.4694	-0.00071678	-3.0475	-0.0014866	-4.5169	-0.0022033	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.86791	1	8270	8270		28.254	3.7503	1	607090			19229	14936	12973	12982	22225	22225					0.08305770405377189
IVNQDLLFK	9	Unmodified	_IVNQDLLFK_					0	0	0			REV__nc|ENSG00000116783|Q59H18-3|TNNI3K	REV__nc|ENSG00000116783|Q59H18-3|TNNI3K	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3165893554688	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.6204	1	10424	10424		45.972	8.1607	1	4868200	+		19230	29797	12974	12983	22226	22226					0.08222889028479585
IVNTDKVGR	9	Unmodified	_IVNTDKVGR_					0	0	0		ENST00000412860.1_1_7:42834686-42835559:+|nuORF	ENST00000412860.1_1_7:42834686-42835559:+|nuORF	ENST00000412860.1_1_7:42834686-42835559:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2900695800781	2	501.290548	1000.56654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.382	1	89.852	89.352	90.352	0.47068								0	0	0	0.31001	1	10591	10591		42.864	4.0581	1				19231	11341	12975	12984	22227	22227					0.06628261191804086
IVNTVLQELY	10	Unmodified	_IVNTVLQELY_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2;nc|ENSG00000188738|Q5CZC0-2|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.331787109375	2	596.334621	1190.65469	-0.30561	-0.00018224	-2.5745	-0.0015353	-2.8801	-0.0017175	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.54701	1	9580	9580		52.937	8.5595	1	740920			19232	7954	12976	12985	22228	22228					0.06698836991768076
IVNVNEVIR	9	Unmodified	_IVNVNEVIR_					0	0	0			REV__ENSG00000167658|ENST00000309311|EEF2	REV__ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.3126831054688	2	528.314023	1054.61349	2.8563	0.001509	-2.641	-0.0013953	0.2152	0.0001137	528.3126813461913	98.458	1.2186	98.403	97.86	99.078	-0.054825					71	27	4	0	0	0	0.77244	1	10650	10650		32.812	3.6424	1	423590	+		19233	21412	12977	12986	22229	22229					0.08837120742941806
IVPCLSNVIL	10	Unmodified	_IVPCLSNVIL_					0	0	0			REV__nc|ENSG00000125885|Q9UJA3-2|MCM8	REV__nc|ENSG00000125885|Q9UJA3-2|MCM8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	535.8154296875	2	535.817553	1069.62055	3.1559	0.001691	-3.1467	-0.001686	0.0092177	4.939E-06	535.8161013513314	99.289	1.4852	99.235	98.78	100.26	-0.053741					66	34	3	0	0	0	0.8651	1	10777	10777		25.574	2.5316	1	505840	+		19234	29825	12978	12987	22230	22230					0.08852717299168944
IVPEALFLPRR	11	Unmodified	_IVPEALFLPRR_					0	0	0		ENSG00000113361|ENST00000265071|CDH6	ENSG00000113361|ENST00000265071|CDH6	ENSG00000113361|ENST00000265071|CDH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.60162353515625	3	437.602957	1309.78704	0.57021	0.00024953	3.0446	0.0013323	3.6148	0.0015818	437.6042812678929	16.007	0.23248	15.983	15.858	16.091	-0.024034					17	9	2	0	0	0	0.74022	1	104	104		24.232	3.3947	1	116480			19235	2717	12979	12988	22231	22231					0.14453906519202064
IVPKQGIELIV	11	Unmodified	_IVPKQGIELIV_					0	0	0			REV__ENSG00000152580|ENST00000282466|IGSF10	REV__ENSG00000152580|ENST00000282466|IGSF10	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.727294921875	3	403.591946	1207.75401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.998	1	23.051	22.551	23.551	0.05291								0	0	0	0.56276	1	712	712		17.833	1.3033	1		+		19236	20306	12980	12989	22232	22232					0.15844279676502993
IVPLFVMLF	9	Unmodified	_IVPLFVMLF_					0	0	0		ENSG00000163464|ENST00000295683|CXCR1	ENSG00000163464|ENST00000295683|CXCR1	ENSG00000163464|ENST00000295683|CXCR1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.8148193359375	2	539.822107	1077.62966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.448	1	44.222	43.722	44.722	0.7738								0	0	0	0.2792	1	3945	3945		39.021	4.849	1				19237	5800	12981	12990	22233	22233					0.0939511065548686
IVPPARFNL	9	Unmodified	_IVPPARFNL_					0	0	0			REV__ENSG00000106304|ENST00000682466|SPAM1	REV__ENSG00000106304|ENST00000682466|SPAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8084106445312	2	513.808377	1025.6022	0.34332	0.0001764	0.75485	0.00038785	1.0982	0.00056425	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.7932	1	3792	3792		25.45	0.94616	1	1306000	+		19238	17605	12982	12991	22234	22234					0.09042343439477918
IVPPARFNL	9	Unmodified	_IVPPARFNL_					0	0	0			REV__ENSG00000106304|ENST00000682466|SPAM1	REV__ENSG00000106304|ENST00000682466|SPAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.3103637695312	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.7932	1	4001	4001		26.796	0	1	1550000	+		19239	17605	12982	12991	22235	22235					0.09042343439477918
IVPPARFNL	9	Unmodified	_IVPPARFNL_					0	0	0			REV__ENSG00000106304|ENST00000682466|SPAM1	REV__ENSG00000106304|ENST00000682466|SPAM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.808349609375	2	513.808377	1025.6022	-0.47838	-0.0002458	1.7183	0.00088287	1.2399	0.00063707	513.8090681534527	46.11	2.0095	46.581	45.725	47.735	0.47139					108	48	3	0	0	0	0.5393	1	4435	4435		50.025	6.3985	1	5264100	+		19240	17605	12982	12991	22236	22236					0.09042343439477918
IVPRELKVRDG	11	Unmodified	_IVPRELKVRDG_					0	0	0			REV__nc|ENSG00000069535|P27338-2|MAOB	REV__nc|ENSG00000069535|P27338-2|MAOB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.3842163085938	2	641.385511	1280.75647	0.94064	0.00060331	-2.5694	-0.001648	-1.6287	-0.0010447	641.3834906355922	102.59	0.76495	102.72	102.3	103.06	0.13293					58	18	4	0	0	0	0.62614	1	10829	10829		41.427	9.8968	1	1429800	+		19241	16584	12983	12992	22237	22237					0.1273212813414375
IVPTEELN	8	Unmodified	_IVPTEELN_					0	0	0			REV__nc|ENSG00000078674|Q15154-4|PCM1	REV__nc|ENSG00000078674|Q15154-4|PCM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2638244628906	2	457.745108	913.475663	0.60445	0.00027668	-3.6543	-0.0016727	-3.0498	-0.0013961	457.74361828666775	83.358	2.8766	83.504	82.245	85.122	0.14694					105	66	2	0	0	0	0.4196	1	8067	8067		15.642	8.9063	1	100720	+		19242	16768	12984	12993	22238	22238					0.015463724236724374
IVPTQWWVQ	9	Unmodified	_IVPTQWWVQ_					0	0	0			REV__chr4:161917254-161920404|18|21.33|0.03|9.5|-|2|TE_info:AluSg7,AluSg7_dup2205,Alu,SINE,acceptor,-,161916948,161917254|None,FSTL5|2	REV__chr4:161917254-161920404|18|21.33|0.03|9.5|-|2|TE_info:AluSg7,AluSg7_dup2205,Alu,SINE,acceptor,-,161916948,161917254|None,FSTL5|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.3109741210938	2	578.811116	1155.60768	1.1514	0.00066645	1.2735	0.00073713	2.4249	0.0014036	579.3135679258645	111.39	0.14817	111.43	111.34	111.48	0.041832					8	6	2	0	0	0	0.20789	1	13474	13474		30.504	0.18592	1	77501	+		19243	15824	12985	12994	22239	22239					0.03610022231259791
IVQFFPDCLG	10	Unmodified	_IVQFFPDCLG_					0	0	0		ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1;nc|ENSG00000008226|Q9Y238-2|DLEC1;ENST00000440294.6_1_3:38080716-38136583:+|nuORF	ENSG00000008226|ENST00000308059|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.7841186523438	2	569.78371	1137.55287	0.49606	0.00028265	3.5042	0.0019966	4.0003	0.0022793	569.7854370196345	79.58	0.6403	79.711	79.504	80.144	0.13085					34	22	2	0	0	0	0.4892	1	7563	7563		56.721	6.6965	1	62474			19244	737	12986	12995	22240	22240					-0.010407326316681065
IVQSLKTHL	9	Unmodified	_IVQSLKTHL_					0	0	0		ENSG00000120800|ENST00000261637|UTP20;ENST00000551825.1_1_12:101673946-101684681:+|nuORF	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8184204101562	2	519.818941	1037.62333	-0.5555	-0.00028876	-0.92049	-0.00047849	-1.476	-0.00076725	519.8183725021587	86.178	0.98313	86.626	86.194	87.177	0.44736					65	23	3	0	0	0	0.51592	1	10160	10160		51.193	10.415	1	1525700			19245	3152	12987	12996	22241	22241					0.10602308748320866
IVQTLPAVQLV	11	Unmodified	_IVQTLPAVQLV_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8667602539062	2	590.868631	1179.72271	-0.23931	-0.0001414	-3.2253	-0.0019057	-3.4646	-0.0020471	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.65746	1	10687	10687		37.812	0	1	39787000			19246	8169	12988	12997	22242	22242					0.140037066423929
IVQTLPAVQLV	11	Unmodified	_IVQTLPAVQLV_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8665771484375	2	590.868631	1179.72271	-0.64254	-0.00037966	-3.2896	-0.0019437	-3.9321	-0.0023234	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.60058	2	11267	11267;11376		44.377	10.205	1	52912000			19247	8169	12988	12997	22243;22244	22243					0.140037066423929
IVQTLPAVQLV	11	Unmodified	_IVQTLPAVQLV_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.866455078125	2	590.868631	1179.72271	-0.76513	-0.00045209	-3.0712	-0.0018147	-3.8363	-0.0022667	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.65746	1	11321	11321		37.812	1.3648	1	54208000			19248	8169	12988	12997	22245	22245					0.140037066423929
IVQTLPAVQLV	11	Unmodified	_IVQTLPAVQLV_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8665161132812	2	590.868631	1179.72271	-1.319	-0.00077937	-2.4341	-0.0014383	-3.7532	-0.0022176	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.58425	2	10977	10977;11076		45.972	3.5761	1	81379000			19249	8169	12988	12997	22246;22247	22246					0.140037066423929
IVQTSCSH	8	Unmodified	_IVQTSCSH_					0	0	0			REV__ENST00000574721.1_1_16:4033231-4033492:-|nuORF	REV__ENST00000574721.1_1_16:4033231-4033492:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7090148925781	2	437.708002	873.401452	-0.087909	-3.8479E-05	3.3914	0.0014845	3.3035	0.001446	437.7093349328845	85.223	1.5345	85.67	85.033	86.568	0.44736					59	37	2	0	0	0	0.90465	1	9998	9998		40.573	5.3719	1	470610	+		19250	28975	12989	12998	22248	22248					-0.040312939395107605
IVRDAVAPG	9	Unmodified	_IVRDAVAPG_					0	0	0		nc|ENSG00000110697|O00562-2|PITPNM1;ENSG00000110697|ENST00000356404|PITPNM1	nc|ENSG00000110697|O00562-2|PITPNM1	nc|ENSG00000110697|O00562-2|PITPNM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.2587890625	2	449.261259	896.507966	-0.14444	-6.4893E-05	-1.6666	-0.00074873	-1.811	-0.00081362	449.26035078800385	70.867	0.56902	70.901	70.62	71.189	0.034004					49	28	2	0	0	0	0.7932	1	6701	6701		24.203	1.1603	1	180840			19251	2534	12990	12999	22249	22249					0.055572046173210765
IVRGDVPFKGG	11	Unmodified	_IVRGDVPFKGG_					0	0	0			REV__nc|ENSG00000165240|Q04656-5|ATP7A	REV__nc|ENSG00000165240|Q04656-5|ATP7A	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	572.83349609375	2	572.827298	1143.64004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.108	1	16.108	15.608	16.608	0								0	0	0	0.56276	1	95	95		24.519	2.5593	1		+		19252	21166	12991	13000	22250	22250					0.0739680963426963
IVRHAPFRKK	10	Unmodified	_IVRHAPFRKK_					0	0	0			REV__ENSG00000183826|ENST00000481247|BTBD9	REV__ENSG00000183826|ENST00000481247|BTBD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3912353515625	2	626.393474	1250.77239	2.3084	0.0014459	3.2426	0.0020312	5.551	0.0034771	626.3953217408156	109.92	1.4097	109.98	109.55	110.95	0.06794					99	57	2	0	0	0	0.85939	1	13286	13286		23.042	2.0956	1	615360	+		19253	22631	12992	13001	22251	22251					0.1570387916171967
IVRILTAPPL	10	Unmodified	_IVRILTAPPL_					0	0	0			REV__ENST00000577437.1_1_X:151298011-151304248:-|nuORF	REV__ENST00000577437.1_1_X:151298011-151304248:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8397216796875	2	546.860609	1091.70667	-0.41327	-0.000226	-4.2929	-0.0023476	-4.7062	-0.0025736	546.8593967042883	101.24	0.8251	101.27	100.79	101.62	0.031036					37	19	3	0	0	0	0.37624	1	10791	10791		34.173	0	1	296450	+		19254	29008	12993	13002	22252	22252					0.16448045196170824
IVRLDPKRSPA	11	Unmodified	_IVRLDPKRSPA_					0	0	0			REV__nc|ENSG00000116604|Q14814-5|MEF2D	REV__nc|ENSG00000116604|Q14814-5|MEF2D	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	627.3764038085938	2	626.380229	1250.7459	2.9099	0.0018227	3.5083	0.0021975	6.4182	0.0040202	626.8843220340907	112.19	0.66212	112.17	112.07	112.73	-0.025414					26	14	2	0	0	0	0.17586	1	12388	12388		31.53	22.347	1	1203600	+		19255	29795	12994	13003	22253	22253					0.13056145479754377
IVRLDPKRSPA	11	Unmodified	_IVRLDPKRSPA_					0	0	0			REV__nc|ENSG00000116604|Q14814-5|MEF2D	REV__nc|ENSG00000116604|Q14814-5|MEF2D	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	626.380229	1250.7459	6.548	0.0041015	4.3245	0.0027088	10.872	0.0068103	626.8834785475434	111.98	0.12059	112.02	111.97	112.09	0.032707	-0.027294	-0.0046729	NaN	31.53	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18116	+		19256	29795	12994	13003							0.13056145479754377
IVRNMKIFV	9	Unmodified	_IVRNMKIFV_					0	0	0			REV__ENSG00000129244|ENST00000250111|ATP1B2	REV__ENSG00000129244|ENST00000250111|ATP1B2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3446044921875	2	560.338987	1118.66342	1.3844	0.00077572	1.8059	0.0010119	3.1903	0.0017876	560.3398338842395	118.75	0.66116	118.77	118.51	119.17	0.026466					37	27	2	0	0	0	0.20789	1	13105	13105		21.96	0	1	39883	+		19257	18813	12995	13004	22254	22254					0.10883532147249753
IVRNRNELAE	10	Unmodified	_IVRNRNELAE_					0	0	0		nc|ENSG00000048649|Q96T23-2|RSF1;ENSG00000048649|ENST00000308488|RSF1	nc|ENSG00000048649|Q96T23-2|RSF1	nc|ENSG00000048649|Q96T23-2|RSF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5609130859375	3	405.226438	1212.65748	-1.9262	-0.00078053	3.3752	0.0013677	1.449	0.00058717	405.22779901784565	27.286	0.62692	27.354	27.093	27.72	0.068678					56	30	3	0	0	0	0.86647	1	1086	1086		28.577	1.5294	1	87420			19258	976	12996	13005	22255	22255					0.05966105169295588
IVRPIRESLNL	11	Unmodified	_IVRPIRESLNL_					0	0	0			REV__nc|ENSG00000138468|Q9BQF6-2|SENP7	REV__nc|ENSG00000138468|Q9BQF6-2|SENP7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2674865722656	3	437.269866	1308.78777	-0.071191	-3.113E-05	-4.4555	-0.0019482	-4.5267	-0.0019794	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.74771	1	4554	4554		22.562	2.5311	1	3270700	+		19259	19477	12997	13006	22256	22256					0.14572701168299318
IVRRRRRRAGH	11	Unmodified	_IVRRRRRRAGH_					0	0	0		ENST00000305877.12_2_22:23522425-23523292:+|nuORF	ENST00000305877.12_2_22:23522425-23523292:+|nuORF	ENST00000305877.12_2_22:23522425-23523292:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.3022155761719	3	478.303009	1431.8872	-1.7989	-0.00086042	1.6614	0.00079467	-0.13747	-6.5752E-05	478.3036786471485	67.172	1.202	67.201	66.753	67.955	0.02858					107	52	3	0	0	0	0.78391	1	6359	6359		14.694	8.3728	1	286540			19260	9853	12998	13007	22257	22257					0.1885300141625521
IVRSPRGG	8	Unmodified	_IVRSPRGG_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.25390625	2	421.253769	840.492984	2.7224	0.0011468	-2.0799	-0.00087617	0.6425	0.00027065	421.25268060933485	84.188	1.829	84.247	83.761	85.59	0.059258					100	41	4	0	0	0	0.79929	1	8492	8492		18.324	0.95945	1	871350			19261	4545	12999	13008	22258	22258					0.06635757539993392
IVRVTGVTK	9	Unmodified	_IVRVTGVTK_					0	0	0			REV__CON__Q1RMK2	REV__CON__Q1RMK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.81329345703125	2	486.813659	971.612765	0.56917	0.00027708	-0.99852	-0.00048609	-0.42935	-0.00020901	486.8131194278926	32.26	1.0233	32.367	32.016	33.04	0.10707					72	23	5	0	0	0	0.038282	1	2269	2269		113.41	9.3548	1	4982000	+	+	19262	15999	13000	13009	22259	22259					0.12582326093900065
IVRWIGGK	8	Unmodified	_IVRWIGGK_					0	0	0			REV__ENSG00000165943|ENST00000298894|MOAP1	REV__ENSG00000165943|ENST00000298894|MOAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7906799316406	2	464.789987	927.565421	-0.5794	-0.0002693	2.1371	0.00099331	1.5577	0.00072401	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.88915	1	2204	2204		35.201	4.6971	1	409180	+		19263	21236	13001	13010	22260	22260					0.09874091613562541
IVSAILGIMV	10	Oxidation (M)	_IVSAILGIM(Oxidation (M))V_		IVSAILGIM(1)V		IVSAILGIM(46)V	0	0	1		nc|ENSG00000197822|Q16625-2|OCLN;nc|ENSG00000197822|Q16625-3|OCLN;ENSG00000197822|ENST00000396442|OCLN	nc|ENSG00000197822|Q16625-2|OCLN	nc|ENSG00000197822|Q16625-2|OCLN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3126220703125	2	516.312103	1030.60965	-0.25799	-0.00013321	3.436	0.001774	3.178	0.0016408	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.67608	1	10623	10623		45.952	7.1458	1	82226000			19264	8203	13002	13011	22261	22261		143			0.09557314924882121
IVSERNELLIQ	11	Unmodified	_IVSERNELLIQ_					0	0	0		ENSG00000163710|ENST00000295992|PCOLCE2	ENSG00000163710|ENST00000295992|PCOLCE2	ENSG00000163710|ENST00000295992|PCOLCE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.5857238769531	3	438.585632	1312.73507	-1.997	-0.00087587	2.084	0.00091402	0.086983	3.8149E-05	438.58651601334884	31.993	0.97123	31.993	31.701	32.672	0					74	39	2	0	0	0	0.72374	1	1572	1572		27.644	2.5179	1	798930			19265	5857	13003	13012	22262	22262					0.09120698314814035
IVSISVLPV	9	Unmodified	_IVSISVLPV_					0	0	0			REV__ENST00000564576.1_1_16:75575341-75590122:-|nuORF	REV__ENST00000564576.1_1_16:75575341-75590122:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80084228515625	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3304	3304		19.36	1.0356	1	890090	+		19266	28840	13004	13013	22263	22263					0.119050031137931
IVSLDEAR	8	Unmodified	_IVSLDEAR_					0	0	0			REV__nc|ENSG00000106034|A4D0V7-2|CPED1	REV__nc|ENSG00000106034|A4D0V7-2|CPED1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.23974609375	2	451.750724	901.486896	2.3118	0.0010444	-2.0036	-0.00090512	0.30825	0.00013925	451.74947013473184	25.077	0.53165	24.639	24.357	24.888	-0.43762					19	11	2	0	0	0	0.4196	1	1297	1297		20.947	0	1	28644	+		19267	17595	13005	13014	22264	22264					0.03221194517800541
IVSLLERVQEQ	11	Unmodified	_IVSLLERVQEQ_					0	0	0		ENST00000396953.6_2_3:12882746-12883025:-|nuORF	ENST00000396953.6_2_3:12882746-12883025:-|nuORF	ENST00000396953.6_2_3:12882746-12883025:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.5857849121094	3	438.585632	1312.73507	1.1659	0.00051134	-0.96066	-0.00042133	0.20521	9.0002E-05	438.58516849233104	31.929	1.1484	31.923	31.521	32.669	-0.0061455					44	26	2	0	0	0	0.69071	1	1781	1781		33.039	2.4705	1	409390			19268	11127	13006	13015	22265	22265					0.09120698314814035
IVSPAKDQS	9	Unmodified	_IVSPAKDQS_					0	0	0			REV__ENSG00000237441|ENST00000497454|RGL2	REV__ENSG00000237441|ENST00000497454|RGL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7566223144531	2	472.756007	943.497461	0.60168	0.00028445	-0.5705	-0.00026971	0.031184	1.4742E-05	472.75559990844266	25.1	0.58479	25.151	24.858	25.443	0.050451					37	20	2	0	0	0	0.44421	1	961	961		54.776	3.5836	1	95939	+		19269	23797	13007	13016	22266	22266					0.023451771722307058
IVSPAKDQS	9	Unmodified	_IVSPAKDQS_					0	0	0			REV__ENSG00000237441|ENST00000497454|RGL2	REV__ENSG00000237441|ENST00000497454|RGL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	472.756007	943.497461	0.093935	4.4408E-05	-0.16291	-7.7017E-05	-0.068976	-3.2609E-05	472.75579799530954	25.081	0.41278	25.181	25.005	25.418	0.10045	-0.03063	0.00024282	NaN	54.776	37	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75712	+		19270	23797	13007	13016							0.023451771722307058
IVSPAKDQS	9	Unmodified	_IVSPAKDQS_					0	0	0			REV__ENSG00000237441|ENST00000497454|RGL2	REV__ENSG00000237441|ENST00000497454|RGL2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	472.756007	943.497461	0.52859	0.00024989	-0.37629	-0.00017789	0.1523	7.2002E-05	472.7557311192579	25.279	0.4759	25.303	25.048	25.524	0.024021	0.091413	4.1072E-05	NaN	54.776	38	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81508	+		19271	23797	13007	13016							0.023451771722307058
IVSPVRPTRR	10	Unmodified	_IVSPVRPTRR_					0	0	0			REV__ENSG00000134504|ENST00000580059|KCTD1	REV__ENSG00000134504|ENST00000580059|KCTD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8670043945312	2	590.867289	1179.72002	-0.23931	-0.0001414	-0.95289	-0.00056303	-1.1922	-0.00070443	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.76096	2	10663	10612;10663		41.427	5.8083	1	39787000	+		19272	19147	13008	13017	22267;22268	22268					0.13735296028130506
IVSPVRPTRR	10	Unmodified	_IVSPVRPTRR_					0	0	0			REV__ENSG00000134504|ENST00000580059|KCTD1	REV__ENSG00000134504|ENST00000580059|KCTD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8666381835938	2	590.867289	1179.72002	-0.64255	-0.00037966	-1.0172	-0.00060105	-1.6598	-0.00098071	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.60985	2	11218	11218;11230		49.536	3.5638	1	52912000	+		19273	19147	13008	13017	22269;22270	22269					0.13735296028130506
IVSPVRPTRR	10	Unmodified	_IVSPVRPTRR_					0	0	0			REV__ENSG00000134504|ENST00000580059|KCTD1	REV__ENSG00000134504|ENST00000580059|KCTD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8668823242188	2	590.867289	1179.72002	-0.76513	-0.00045209	-0.7988	-0.00047199	-1.5639	-0.00092408	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.76096	4	11226	11226;11286;11298;11346		41.427	13.544	1	54208000	+		19274	19147	13008	13017	22271;22272;22273;22274	22271					0.13735296028130506
IVSPVRPTRR	10	Unmodified	_IVSPVRPTRR_					0	0	0			REV__ENSG00000134504|ENST00000580059|KCTD1	REV__ENSG00000134504|ENST00000580059|KCTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.867431640625	2	590.867289	1179.72002	0.84845	0.00050132	-2.4301	-0.0014359	-1.5816	-0.00093454	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.8545	5	10867	10867;10890;10938;10986;11131		36.447	8.5645	1	94771000	+		19275	19147	13008	13017	22275;22276;22277;22278;22279	22275					0.13735296028130506
IVSPVRPTRR	10	Unmodified	_IVSPVRPTRR_					0	0	0			REV__ENSG00000134504|ENST00000580059|KCTD1	REV__ENSG00000134504|ENST00000580059|KCTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8665771484375	2	590.867289	1179.72002	0.89156	0.00052679	-2.3999	-0.001418	-1.5084	-0.00089125	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.76096	2	10931	10907;10931		41.427	12.277	1	84183000	+		19276	19147	13008	13017	22280;22281	22281					0.13735296028130506
IVSPVRPTRR	10	Unmodified	_IVSPVRPTRR_					0	0	0			REV__ENSG00000134504|ENST00000580059|KCTD1	REV__ENSG00000134504|ENST00000580059|KCTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8662109375	2	590.867289	1179.72002	-1.319	-0.00077937	-0.16176	-9.558E-05	-1.4808	-0.00087495	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.76096	5	10860	10814;10860;10872;11028;11052		41.427	5.9431	1	81379000	+		19277	19147	13008	13017	22282;22283;22284;22285;22286	22283					0.13735296028130506
IVSPVRPTRR	10	Unmodified	_IVSPVRPTRR_					0	0	0			REV__ENSG00000134504|ENST00000580059|KCTD1	REV__ENSG00000134504|ENST00000580059|KCTD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.866455078125	2	590.867289	1179.72002	1.3812	0.0008161	-2.2271	-0.0013159	-0.8459	-0.00049981	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.64457	2	12683	12598;12683		47.657	9.8458	1	6168400	+		19278	19147	13008	13017	22287;22288	22288					0.13735296028130506
IVSPVRPTRR	10	Unmodified	_IVSPVRPTRR_					0	0	0			REV__ENSG00000134504|ENST00000580059|KCTD1	REV__ENSG00000134504|ENST00000580059|KCTD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8671264648438	2	590.867289	1179.72002	3.2055	0.001894	-4.0778	-0.0024095	-0.87234	-0.00051544	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.76096	1	12581	12581		41.427	3.6151	1	6398400	+		19279	19147	13008	13017	22289	22289					0.13735296028130506
IVSSPILF	8	Unmodified	_IVSSPILF_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2638244628906	2	438.265479	874.516405	-1.8646	-0.00081717	-3.5126	-0.0015394	-5.3771	-0.0023566	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.83466	1	3131	3131		23.037	1.3344	1	3384400	+		19280	16355	13009	13018	22290	22290					0.07412758533951092
IVSYLKLMTSQ	11	Unmodified	_IVSYLKLMTSQ_					0	0	0			REV__nc|ENSG00000185261|Q8IV33|KIAA0825	REV__nc|ENSG00000185261|Q8IV33|KIAA0825	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8587646484375	2	641.857406	1281.70026	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.25	1	119.27	118.77	119.77	0.026466								0	0	0	0.56276	1	13124	13124		16.717	1.0756	1		+		19281	22753	13010	13019	22291	22291					0.07067739182502919
IVTKFERTQ	9	Unmodified	_IVTKFERTQ_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3403930664062	2	561.319306	1120.62406	0.38659	0.000217	4.0125	0.0022523	4.3991	0.0024693	561.3212428476022	89.221	0.77324	89.429	89	89.773	0.2073					20	17	2	0	0	0	0.20789	1	8924	8924		24.519	0	1	101270			19282	6508	13011	13020	22292	22292					0.06857103397373976
IVTLCLVID	9	Unmodified	_IVTLCLVID_					0	0	0			REV__ENSG00000184478|ENST00000641160|OR56A3	REV__ENSG00000184478|ENST00000641160|OR56A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7935791015625	2	494.791004	987.567454	0.53508	0.00026475	3.648	0.001805	4.1831	0.0020697	494.7926397196607	26.556	0.66258	26.601	26.257	26.92	0.045507					37	18	3	0	0	0	0.74721	1	1142	1142		37.159	6.6555	1	91230	+		19283	22684	13012	13021	22293	22293					0.0731733951647584
IVTLHVTSF	9	Unmodified	_IVTLHVTSF_					0	0	0		ENSG00000196208|ENST00000381486|GREB1	ENSG00000196208|ENST00000381486|GREB1	ENSG00000196208|ENST00000381486|GREB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7727966308594	2	508.792392	1015.57023	-0.063698	-3.2409E-05	-1.3919	-0.00070817	-1.4556	-0.00074058	508.79178054665306	75.194	1.1229	75.59	75.198	76.321	0.39507					41	26	2	0	0	0	0.20789	1	8491	8491		65.803	32.288	1	292800			19284	8026	13013	13022	22294	22294					0.06306930965672564
IVTPFVSSPP	10	Unmodified	_IVTPFVSSPP_					0	0	0		ENST00000478000.5_1_7:938560-944975:-|nuORF	ENST00000478000.5_1_7:938560-944975:-|nuORF	ENST00000478000.5_1_7:938560-944975:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	522.2896118164062	2	522.292225	1042.5699	0.060786	3.1748E-05	-3.83	-0.0020004	-3.7692	-0.0019686	522.28999387396	36.822	1.0695	36.803	36.509	37.578	-0.018673					41	23	3	0	0	0	0.43769	1	2383	2383		60.972	4.2509	1	237130			19285	12372	13014	13023	22295	22295					0.050315112458065414
IVTSVLLLY	9	Unmodified	_IVTSVLLLY_					0	0	0		ENST00000502786.1_1_4:141580724-141580856:-|nuORF;ENSG00000197226|ENST00000355235|TBC1D9B;nc|ENSG00000197226|Q66K14|TBC1D9B;ENSG00000109436|ENST00000442267|TBC1D9	ENST00000502786.1_1_4:141580724-141580856:-|nuORF	ENST00000502786.1_1_4:141580724-141580856:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8201904296875	2	510.820618	1019.62668	1.5123	0.00077251	-2.2629	-0.0011559	-0.75057	-0.00038341	510.81939038827716	94.589	0.80517	95.022	94.713	95.518	0.4324					51	18	4	0	0	0	0.17071	2	11299	11286;11299		79.939	11.455	1	731510			19286	2461	13015	13024	22296;22297	22297					0.11765558802335363
IVTSVLLLY	9	Unmodified	_IVTSVLLLY_					0	0	0		ENST00000502786.1_1_4:141580724-141580856:-|nuORF;ENSG00000197226|ENST00000355235|TBC1D9B;nc|ENSG00000197226|Q66K14|TBC1D9B;ENSG00000109436|ENST00000442267|TBC1D9	ENST00000502786.1_1_4:141580724-141580856:-|nuORF	ENST00000502786.1_1_4:141580724-141580856:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8203430175781	2	510.820618	1019.62668	0.72356	0.00036961	-1.7932	-0.00091601	-1.0696	-0.0005464	510.81978429305985	94.733	0.77902	95.153	94.808	95.587	0.41963					52	18	4	0	0	0	0.25826	1	11372	11372		68.485	8.1907	1	885090			19287	2461	13015	13024	22298	22298					0.11765558802335363
IVVAVFSV	8	Unmodified	_IVVAVFSV_					0	0	0		ENSG00000272674|ENST00000609684|PCDHB16	ENSG00000272674|ENST00000609684|PCDHB16	ENSG00000272674|ENST00000609684|PCDHB16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2580871582031	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.81548	1	592	592		20.482	3.1169	1	679020			19288	8985	13016	13025	22299	22299					0.08288775879520927
IVVHIYEDGIK	11	Unmodified	_IVVHIYEDGIK_					0	0	0		nc|ENSG00000116703|P20941-2|PDC;ENSG00000116703|ENST00000391997|PDC;nc|ENSG00000116703|P20941-3|PDC	nc|ENSG00000116703|P20941-2|PDC	nc|ENSG00000116703|P20941-2|PDC	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.3676147460938	2	643.36117	1284.70779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.77	1	115.76	115.26	116.26	-0.0021133								0	0	0	0.56276	1	13926	13926		30.318	1.1477	1				19289	2938	13017	13026	22300	22300					0.07682214774399654
IVVHLHPAP	9	Unmodified	_IVVHLHPAP_					0	0	0		ENST00000475375.1_1_13:53010343-53024741:-|nuORF;nc|ENSG00000136100|Q86VN1-2|VPS36;ENSG00000136100|ENST00000378060|VPS36	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.795654296875	2	491.795269	981.575986	0.09879	4.8585E-05	0.95013	0.00046727	1.0489	0.00051585	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.78292	1	4215	4215		29.842	5.6388	1	1349600			19290	4087	13018	13027	22301	22301					0.08446074267988024
IVVHLHPAP	9	Unmodified	_IVVHLHPAP_					0	0	0		ENST00000475375.1_1_13:53010343-53024741:-|nuORF;nc|ENSG00000136100|Q86VN1-2|VPS36;ENSG00000136100|ENST00000378060|VPS36	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7945556640625	2	491.795269	981.575986	0.13478	6.6286E-05	0.38667	0.00019016	0.52145	0.00025645	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.7932	1	5574	5574		21.702	1.7056	1	176030			19291	4087	13018	13027	22302	22302					0.08446074267988024
IVVHLHPAP	9	Unmodified	_IVVHLHPAP_					0	0	0		ENST00000475375.1_1_13:53010343-53024741:-|nuORF;nc|ENSG00000136100|Q86VN1-2|VPS36;ENSG00000136100|ENST00000378060|VPS36	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.796142578125	2	491.795269	981.575986	-1.7961	-0.00088329	2.9764	0.0014638	1.1803	0.00058047	491.7966581870457	51.567	1.6539	51.579	50.697	52.351	0.012436					117	46	3	0	0	0	0.7932	1	4494	4494		21.702	1.2205	1	354980			19292	4087	13018	13027	22303	22303					0.08446074267988024
IVVHLHPAP	9	Unmodified	_IVVHLHPAP_					0	0	0		ENST00000475375.1_1_13:53010343-53024741:-|nuORF;nc|ENSG00000136100|Q86VN1-2|VPS36;ENSG00000136100|ENST00000378060|VPS36	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79571533203125	2	491.795269	981.575986	-2.308	-0.0011351	4.1081	0.0020204	1.8001	0.00088528	491.7972659418399	66.608	0.76704	66.637	66.27	67.037	0.028587					49	36	2	0	0	0	0.7932	1	6353	6353		21.702	1.2205	1	82032			19293	4087	13018	13027	22304	22304					0.08446074267988024
IVVHLHPAP	9	Unmodified	_IVVHLHPAP_					0	0	0		ENST00000475375.1_1_13:53010343-53024741:-|nuORF;nc|ENSG00000136100|Q86VN1-2|VPS36;ENSG00000136100|ENST00000378060|VPS36	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957458496094	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.78292	1	4540	4540		29.842	10.482	1	1759500			19294	4087	13018	13027	22305	22305					0.08446074267988024
IVVHLHPAP	9	Unmodified	_IVVHLHPAP_					0	0	0		ENST00000475375.1_1_13:53010343-53024741:-|nuORF;nc|ENSG00000136100|Q86VN1-2|VPS36;ENSG00000136100|ENST00000378060|VPS36	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	ENST00000475375.1_1_13:53010343-53024741:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79608154296875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.43	1	54.836	54.336	55.336	0.40663								0	0	0	0.2792	1	5540	5540		39.021	1.8624	1				19295	4087	13018	13027	22306	22306					0.08446074267988024
IVVITVVSAM	10	Unmodified	_IVVITVVSAM_					0	0	0			REV__nc|ENSG00000134545|P26715-2|KLRC1	REV__nc|ENSG00000134545|P26715-2|KLRC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3153076171875	2	516.312103	1030.60965	0.87081	0.00044961	2.9737	0.0015354	3.8445	0.001985	516.313628553853	118.82	0.58643	118.84	118.61	119.19	0.026466					32	24	2	0	0	0	0.85694	1	13087	13087		21.96	1.013	1	55044	+		19296	19150	13019	13028	22307	22307					0.09557314924882121
IVVLIIIEAL	10	Unmodified	_IVVLIIIEAL_					0	0	0			REV__ENST00000565325.5_1_15:73854253-73925580:-|nuORF	REV__ENST00000565325.5_1_15:73854253-73925580:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	548.37451171875	2	548.373018	1094.73148	0.27438	0.00015046	2.33	0.0012777	2.6044	0.0014282	548.3741056570226	37.106	1.654	37.206	36.174	37.827	0.099277					123	52	3	0	0	0	0.91289	1	2023	2023		7.1934	0.45781	1	393850	+		19297	20499	13020	13029	22308	22308					0.18790680278880245
IVVLPKEDS	9	Unmodified	_IVVLPKEDS_					0	0	0		ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.29052734375	2	500.289682	998.564812	0.20837	0.00010425	0.52136	0.00026083	0.72973	0.00036508	500.28973006891505	65.131	0.53345	65.685	65.369	65.903	0.55355					23	13	3	0	0	0	0.7932	1	7085	7085		17.365	1.7287	1	250440			19298	1196	13021	13030	22309	22309					0.06547207383187015
IVVLPKEDS	9	Unmodified	_IVVLPKEDS_					0	0	0		ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	500.289682	998.564812	-0.59514	-0.00029774	1.2445	0.00062261	0.64936	0.00032487	500.2903335226982	65.271	0.51849	65.657	65.234	65.752	0.38615	-0.014034	0.00037342	NaN	17.365	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	229310			19299	1196	13021	13030							0.06547207383187015
IVVMLFYIKL	10	Unmodified	_IVVMLFYIKL_					0	0	0			REV__ENST00000597347.5_1_3:180893045-181281553:+|nuORF	REV__ENST00000597347.5_1_3:180893045-181281553:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3328247070312	2	619.882696	1237.75084	0.63343	0.00039265	0.35755	0.00022164	0.99098	0.00061429	619.8817359964911	58.473	0.20943	59.026	58.88	59.089	0.55323					5	4	2	0	0	0	0.37624	1	6130	6130		63.306	17.334	1	107170	+		19300	29266	13022	13031	22310	22310					0.14147313298144581
IVVMVIETEL	10	Oxidation (M)	_IVVM(Oxidation (M))VIETEL_		IVVM(1)VIETEL		IVVM(46)VIETEL	0	0	1		ENSG00000080709|ENST00000673685|KCNN2;nc|ENSG00000080709|Q9H2S1|KCNN2;ENSG00000143603|ENST00000271915|KCNN3	ENSG00000080709|ENST00000673685|KCNN2;ENSG00000143603|ENST00000271915|KCNN3	ENSG00000143603|ENST00000271915|KCNN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.3250732421875	2	581.325408	1160.63626	-0.86869	-0.00050499	-0.89913	-0.00052269	-1.7678	-0.0010277	581.3247028868919	63.922	0.69054	63.922	63.65	64.341	-0.00078583					66	24	3	0	0	0	0.67608	1	5946	5946		45.952	18.07	1	377210			19301	1450;4650	13023	13032	22311	22311		27			0.0623695902554573
IVVMVIETEL	10	Oxidation (M)	_IVVM(Oxidation (M))VIETEL_		IVVM(1)VIETEL		IVVM(46)VIETEL	0	0	1		ENSG00000080709|ENST00000673685|KCNN2;nc|ENSG00000080709|Q9H2S1|KCNN2;ENSG00000143603|ENST00000271915|KCNN3	ENSG00000080709|ENST00000673685|KCNN2;ENSG00000143603|ENST00000271915|KCNN3	ENSG00000143603|ENST00000271915|KCNN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.3235473632812	2	581.325408	1160.63626	0.19884	0.00011559	-1.7598	-0.001023	-1.5609	-0.0009074	581.3241550069021	63.873	0.6954	63.839	63.484	64.179	-0.034256					60	21	3	0	0	0	0.67608	1	6073	6073		45.952	7.1458	1	337800			19302	1450;4650	13023	13032	22312	22312		27			0.0623695902554573
IVVNNPDL	8	Unmodified	_IVVNNPDL_					0	0	0		ENSG00000163964|ENST00000392391|PIGX;nc|ENSG00000163964|Q8TBF5-2|PIGX	ENSG00000163964|ENST00000392391|PIGX	ENSG00000163964|ENST00000392391|PIGX	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.33221435546875	2	442.247818	882.481082	-1.5261	-0.00067493	1.8843	0.00083335	0.35821	0.00015842	442.24880084990355	25.39	0.48744	25.453	25.168	25.655	0.063122					33	23	2	0	0	0	0.4196	1	934	934		26.796	0	1	60436			19303	5896	13024	13033	22313	22313					0.0351409600613124
IVVRGYII	8	Unmodified	_IVVRGYII_					0	0	0		ENSG00000187323|ENST00000442544|DCC;chr18:53486952-53499298|19|22.53|0.69|5.02|+|ENST00000581580|DCC,DCC	ENSG00000187323|ENST00000442544|DCC	ENSG00000187323|ENST00000442544|DCC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.7974853515625	2	466.80002	931.585488	-2.0963	-0.00097857	-2.8224	-0.0013175	-4.9187	-0.0022961	466.79854136992486	18.836	0.83793	18.836	18.709	19.547	0					67	29	3	0	0	0	0.80127	1	356	356		16.705	1.0687	1	190850			19304	253	13025	13034	22314	22314					0.11695842553513103
IVVTHCLL	8	Unmodified	_IVVTHCLL_					0	0	0		ENSG00000221886|ENST00000408953|FAM200C	ENSG00000221886|ENST00000408953|FAM200C	ENSG00000221886|ENST00000408953|FAM200C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.26361083984375	2	449.264956	896.515359	-0.33425	-0.00015017	-3.2584	-0.0014639	-3.5927	-0.0016141	449.26334220475974	65.078	0.8138	65.044	64.648	65.462	-0.034798					96	31	4	0	0	0	0.60155	1	6203	6203		71.378	4.0507	1	2478600			19305	8678	13026	13035	22315	22315					0.06296220893375448
IVVTMLSVPIS	11	Unmodified	_IVVTMLSVPIS_					0	0	0			REV__ENST00000373547.8_1_9:127910611-127910710:-|nuORF	REV__ENST00000373547.8_1_9:127910611-127910710:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	579.84375	2	579.843768	1157.67298	-0.30572	-0.00017727	0.37594	0.00021799	0.070222	4.0718E-05	579.8442285460155	102.54	1.4926	102.54	101.62	103.11	0					80	37	4	0	0	0	0.70737	1	10478	10478		30.318	1.1477	1	838830	+		19306	25764	13027	13036	22316	22316					0.10045255642103257
IVVYAMAL	8	Unmodified	_IVVYAMAL_					0	0	0			REV__ENST00000531469.5_1_10:126799584-126847254:-|nuORF	REV__ENST00000531469.5_1_10:126799584-126847254:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.255126953125	2	440.254057	878.493561	-1.4867	-0.00065454	4.467	0.0019666	2.9803	0.0013121	440.2558792148897	67.228	0.84634	67.361	67.023	67.869	0.13326					70	34	3	0	0	0	0.84567	1	6009	6009		24.504	2.5441	1	457950	+		19307	28303	13028	13037	22317	22317					0.049454161448238665
IVYIKGKPTG	10	Unmodified	_IVYIKGKPTG_					0	0	0			REV__nc|ENSG00000105339|A2RUS2-2|DENND3	REV__nc|ENSG00000105339|A2RUS2-2|DENND3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.327392578125	2	538.329142	1074.64373	0.070633	3.8024E-05	-4.4231	-0.0023811	-4.3525	-0.0023431	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.86718	1	10929	10929		27.882	1.1893	1	109840000	+		19308	17527	13029	13038	22318	22318					0.10939479408125408
IVYKIRAAE	9	Unmodified	_IVYKIRAAE_					0	0	0		ENST00000557260.1_1_14:104380761-104387854:-|nuORF	ENST00000557260.1_1_14:104380761-104387854:-|nuORF	ENST00000557260.1_1_14:104380761-104387854:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8165283203125	2	531.818941	1061.62333	-1.5114	-0.00080377	-2.2871	-0.0012163	-3.7984	-0.0020201	531.8175540203803	101.15	0.94157	101.3	100.92	101.86	0.15505					40	23	3	0	0	0	0.74721	1	10540	10540		37.159	0.71236	1	369980			19309	13767	13030	13039	22319	22319					0.09498308748334239
IVYNMSITI	9	Unmodified	_IVYNMSITI_					0	0	0			REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.1588134765625	2	527.286085	1052.55762	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.538	1	15.538	15.038	16.038	0								0	0	0	0.28386	1	39	39		37.159	10.466	1		+		19310	19889	13031	13040	22320	22320					0.0334415151110079
IVYQYGVWLKR	11	Unmodified	_IVYQYGVWLKR_					0	0	0			REV__nc|ENSG00000070413|P98153-2|DGCR2	REV__nc|ENSG00000070413|P98153-2|DGCR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	475.6078796386719	3	475.606478	1423.79761	-0.0098537	-4.6865E-06	3.9106	0.0018599	3.9008	0.0018552	475.6083074835196	51.584	0.56668	51.582	51.307	51.874	-0.0020447					21	12	2	0	0	0	0.78683	1	4414	4414		14.086	0.57807	1	114630	+		19311	16602	13032	13041	22321	22321					0.10265889173638243
IVYVTEIDPI	10	Unmodified	_IVYVTEIDPI_					0	0	0		nc|ENSG00000158467|Q96HN2-4|AHCYL2;nc|ENSG00000158467|Q96HN2-3|AHCYL2;nc|ENSG00000158467|Q96HN2-2|AHCYL2;ENSG00000158467|ENST00000325006|AHCYL2	nc|ENSG00000158467|Q96HN2-4|AHCYL2	nc|ENSG00000158467|Q96HN2-4|AHCYL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.3234252929688	2	581.323722	1160.63289	-0.86869	-0.00050499	2.0001	0.0011627	1.1314	0.00065773	581.3247028868919	63.922	0.69054	63.922	63.65	64.341	-0.00078583					66	24	3	0	0	0	0.43769	1	5955	5955		60.972	2.19	1	377210			19312	5479	13033	13042	22322	22322					0.05900032243175701
IVYVTEIDPI	10	Unmodified	_IVYVTEIDPI_					0	0	0		nc|ENSG00000158467|Q96HN2-4|AHCYL2;nc|ENSG00000158467|Q96HN2-3|AHCYL2;nc|ENSG00000158467|Q96HN2-2|AHCYL2;ENSG00000158467|ENST00000325006|AHCYL2	nc|ENSG00000158467|Q96HN2-4|AHCYL2	nc|ENSG00000158467|Q96HN2-4|AHCYL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	581.8221435546875	2	581.323722	1160.63289	-0.49301	-0.0002866	2.0171	0.0011726	1.5241	0.00088602	581.3245621009004	63.895	0.60842	63.925	63.588	64.197	0.030247					58	24	3	0	0	0	0.81018	1	5619	5619		38.806	0.99462	1	148510			19313	5479	13033	13042	22323	22323					0.05900032243175701
IWASLLGKN	9	Unmodified	_IWASLLGKN_					0	0	0		ENSG00000172000|ENST00000307635|ZNF556	ENSG00000172000|ENST00000307635|ZNF556	ENSG00000172000|ENST00000307635|ZNF556	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2905578613281	2	501.292559	1000.57057	-1.5697	-0.00078686	-2.6476	-0.0013272	-4.2173	-0.0021141	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.72402	1	8457	8457		38.806	8.3025	1	9242300			19314	6732	13034	13043	22324	22324					0.07030350685533904
IWAVIKPG	8	Unmodified	_IWAVIKPG_					0	0	0		nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;ENSG00000141837|ENST00000360228|CACNA1A	nc|ENSG00000141837|O00555-5|CACNA1A	nc|ENSG00000141837|O00555-5|CACNA1A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2743835449219	2	442.273638	882.532724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.103	1	56.093	55.593	56.593	-0.010136								0	0	0	0.30004	1	5029	5029		21.702	6.0661	1				19315	4530	13035	13044	22325	22325					0.08675884490708086
IWCVLALI	8	Unmodified	_IWCVLALI_					0	0	0			REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7773742675781	2	465.777699	929.540846	-1.2002	-0.00055902	0.93559	0.00043578	-0.26459	-0.00012324	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.88393	1	7585	7585		33.493	1.5381	1	683640	+		19316	15713	13036	13045	22326	22326					0.07325695415806877
IWCVLALI	8	Unmodified	_IWCVLALI_					0	0	0			REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77752685546875	2	465.777699	929.540846	0.52254	0.00024339	-0.83161	-0.00038735	-0.30907	-0.00014396	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.88393	1	8313	8313		33.493	5.2387	1	1330400	+		19317	15713	13036	13045	22327	22327					0.07325695415806877
IWCVLALI	8	Unmodified	_IWCVLALI_					0	0	0			REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7772216796875	2	465.777699	929.540846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.975	1	79.918	79.418	80.418	-0.056503								0	0	0	0.29725	1	8022	8022		24.504	0.30126	1		+		19318	15713	13036	13045	22328	22328					0.07325695415806877
IWCVLALI	8	Unmodified	_IWCVLALI_					0	0	0			REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77789306640625	2	465.777699	929.540846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.287	1	80.23	79.73	80.73	-0.056503								0	0	0	0.30553	1	8062	8062		16.705	1.8401	1		+		19319	15713	13036	13045	22329	22329					0.07325695415806877
IWCVLALI	8	Unmodified	_IWCVLALI_					0	0	0			REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7776184082031	2	465.777699	929.540846	-1.0371	-0.00048307	0.66012	0.00030747	-0.37701	-0.0001756	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.88393	1	7903	7903		33.493	8.0428	1	1384500	+		19320	15713	13036	13045	22330	22330					0.07325695415806877
IWCVLALI	8	Unmodified	_IWCVLALI_					0	0	0			REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77783203125	2	465.777699	929.540846	0.5788	0.00026959	-0.79351	-0.0003696	-0.21471	-0.00010001	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.84567	1	7569	7569		24.504	0.30126	1	344270	+		19321	15713	13036	13045	22331	22331					0.07325695415806877
IWCVLALI	8	Unmodified	_IWCVLALI_					0	0	0			REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7773742675781	2	465.777699	929.540846	-1.5315	-0.00071332	1.2587	0.00058629	-0.27274	-0.00012704	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.88393	1	7944	7944		33.493	2.9893	1	991370	+		19322	15713	13036	13045	22332	22332					0.07325695415806877
IWCVLALI	8	Unmodified	_IWCVLALI_					0	0	0			REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	REV__chr19:46124321-46124625|56|907.93|0.99|9.85|-|2|IGFL3,IGFL3|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.77734375	2	465.777699	929.540846	-0.69238	-0.0003225	0.57321	0.00026699	-0.11917	-5.5507E-05	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.91333	1	9598	9598		43.626	1.2299	1	927810	+		19323	15713	13036	13045	22333	22333					0.07325695415806877
IWDLLKLKLPD	11	Unmodified	_IWDLLKLKLPD_					0	0	0			REV__nc|ENSG00000178950|O14976-2|GAK	REV__nc|ENSG00000178950|O14976-2|GAK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.2764892578125	3	451.942868	1352.80677	-1.6541	-0.00074756	2.7729	0.0012532	1.1188	0.00050565	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.76892	1	4600	4600		17.833	5.4003	1	430100	+		19324	22302	13037	13046	22334	22334					0.1444823773929329
IWDLSITRL	9	Unmodified	_IWDLSITRL_					0	0	0		ENST00000333055.8_1_5:180235916-180242536:-|nuORF	ENST00000333055.8_1_5:180235916-180242536:-|nuORF	ENST00000333055.8_1_5:180235916-180242536:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.8236694335938	2	558.824224	1115.63389	0.11278	6.3023E-05	-0.17088	-9.5493E-05	-0.058104	-3.247E-05	558.824052192511	81.787	1.6968	82.214	81.753	83.45	0.42645					96	41	3	0	0	0	3.5946E-20	6	9422	9411;9422;9433;9445;9458;9472		176.44	74.844	1	7212100			19325	10135	13038	13047	22335;22336;22337;22338;22339;22340	22336					0.08070291402736984
IWDLSITRL	9	Unmodified	_IWDLSITRL_					0	0	0		ENST00000333055.8_1_5:180235916-180242536:-|nuORF	ENST00000333055.8_1_5:180235916-180242536:-|nuORF	ENST00000333055.8_1_5:180235916-180242536:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.824462890625	2	558.824224	1115.63389	0.045147	2.5229E-05	-0.074848	-4.1827E-05	-0.029701	-1.6598E-05	558.8240985486971	81.74	2.5325	82.24	81.786	84.318	0.49967					132	61	4	0	0	0	3.5946E-20	6	9444	9434;9444;9454;9466;9480;9493		176.44	69.437	1	6695700			19326	10135	13038	13047	22341;22342;22343;22344;22345;22346	22342					0.08070291402736984
IWDLSITRL	9	Unmodified	_IWDLSITRL_					0	0	0		ENST00000333055.8_1_5:180235916-180242536:-|nuORF	ENST00000333055.8_1_5:180235916-180242536:-|nuORF	ENST00000333055.8_1_5:180235916-180242536:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	558.824224	1115.63389	-1.0432	-0.00058299	1.1942	0.00066736	0.15098	8.4371E-05	558.8244899080897	82.369	0.61497	82.435	82.043	82.658	0.065918	0.11427	0.0015739	NaN	176.44	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107350			19327	10135	13038	13047							0.08070291402736984
IWDLSITRL	9	Unmodified	_IWDLSITRL_					0	0	0		ENST00000333055.8_1_5:180235916-180242536:-|nuORF	ENST00000333055.8_1_5:180235916-180242536:-|nuORF	ENST00000333055.8_1_5:180235916-180242536:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	558.824224	1115.63389	0.91944	0.00051381	-1.1726	-0.00065528	-0.25316	-0.00014147	558.8234201908944	82.456	0.56927	82.39	82.149	82.719	-0.066185	0.069826	-0.0010714	NaN	176.44	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115950			19328	10135	13038	13047							0.08070291402736984
IWDLSITRL	9	Unmodified	_IWDLSITRL_					0	0	0		ENST00000333055.8_1_5:180235916-180242536:-|nuORF	ENST00000333055.8_1_5:180235916-180242536:-|nuORF	ENST00000333055.8_1_5:180235916-180242536:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	558.824224	1115.63389	0.8876	0.00049601	-1.2868	-0.00071908	-0.39917	-0.00022307	558.8235393133587	82.264	0.74339	82.323	82.031	82.774	0.059158	0.0031555	-0.001199	NaN	176.44	30	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102080			19329	10135	13038	13047							0.08070291402736984
IWEKVLNN	8	Unmodified	_IWEKVLNN_					0	0	0			REV__nc|ENSG00000115421|Q9BWT3-2|PAPOLG;REV__ENSG00000090060|ENST00000216277|PAPOLA	REV__ENSG00000090060|ENST00000216277|PAPOLA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.27996826171875	2	508.282192	1014.54983	-0.38511	-0.00019575	-3.5589	-0.0018089	-3.944	-0.0020047	508.28029410514995	88.272	2.579	88.735	87.686	90.265	0.46312					198	63	4	0	0	0	0.9283	1	10344	10344		49.442	5.3247	1	2008000	+		19330	18119;16981	13039	13048	22347	22347					0.04313760305853975
IWFLVPIS	8	Unmodified	_IWFLVPIS_					0	0	0		ENSG00000163624|ENST00000295887|CDS1	ENSG00000163624|ENST00000295887|CDS1	ENSG00000163624|ENST00000295887|CDS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7904357910156	2	487.789121	973.56369	-1.0855	-0.00052952	3.9357	0.0019198	2.8501	0.0013903	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.88915	1	7735	7735		35.201	0	1	309700			19331	5838	13040	13049	22348	22348					0.0758503780494948
IWFLVPIS	8	Unmodified	_IWFLVPIS_					0	0	0		ENSG00000163624|ENST00000295887|CDS1	ENSG00000163624|ENST00000295887|CDS1	ENSG00000163624|ENST00000295887|CDS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.79071044921875	2	487.789121	973.56369	-0.085473	-4.1693E-05	3.1785	0.0015504	3.093	0.0015087	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.86288	1	8518	8518		26.796	0	1	1889700			19332	5838	13040	13049	22349	22349					0.0758503780494948
IWFLVPIS	8	Unmodified	_IWFLVPIS_					0	0	0		ENSG00000163624|ENST00000295887|CDS1	ENSG00000163624|ENST00000295887|CDS1	ENSG00000163624|ENST00000295887|CDS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79071044921875	2	487.789121	973.56369	0.84663	0.00041298	2.2083	0.0010772	3.0549	0.0014902	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.81548	1	8651	8651		20.482	0	1	2238600			19333	5838	13040	13049	22350	22350					0.0758503780494948
IWGRKITG	8	Unmodified	_IWGRKITG_					0	0	0		chr19:47180303-47203671|23|25.61|0.26|6.6|+|2|SAE1,SAE1|1	chr19:47180303-47203671|23|25.61|0.26|6.6|+|2|SAE1,SAE1|1	chr19:47180303-47203671|23|25.61|0.26|6.6|+|2|SAE1,SAE1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77740478515625	2	465.779619	929.544686	-1.0371	-0.00048307	-3.4618	-0.0016124	-4.4989	-0.0020955	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.89494	1	7951	7951		37.159	0	1	1384500			19334	285	13041	13050	22351	22351					0.07709501233887295
IWGRKITG	8	Unmodified	_IWGRKITG_					0	0	0		chr19:47180303-47203671|23|25.61|0.26|6.6|+|2|SAE1,SAE1|1	chr19:47180303-47203671|23|25.61|0.26|6.6|+|2|SAE1,SAE1|1	chr19:47180303-47203671|23|25.61|0.26|6.6|+|2|SAE1,SAE1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7774963378906	2	465.779619	929.544686	-1.5315	-0.00071332	-2.8632	-0.0013336	-4.3947	-0.0020469	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.884	1	7795	7795		33.516	0	1	991370			19335	285	13041	13050	22352	22352					0.07709501233887295
IWKNKLPVPGN	11	Unmodified	_IWKNKLPVPGN_					0	0	0		ENST00000342992.10_3_2:179400050-179400158:-|nuORF	ENST00000342992.10_3_2:179400050-179400158:-|nuORF	ENST00000342992.10_3_2:179400050-179400158:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.369140625	2	633.371872	1264.72919	-0.11908	-7.5423E-05	-4.0759	-0.0025816	-4.195	-0.002657	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.5603	1	9625	9625		47.657	1.7054	1	2722900			19336	10272	13042	13051	22353	22353					0.10741644593804267
IWLRKLSRIT	10	Unmodified	_IWLRKLSRIT_					0	0	0			REV__ENST00000263377.6_1_19:15379807-15383627:-|nuORF	REV__ENST00000263377.6_1_19:15379807-15383627:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4054565429688	2	643.408789	1284.80303	0.024155	1.5542E-05	-4.3274	-0.0027843	-4.3033	-0.0027688	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.86763	1	11055	11055		26.693	1.1189	1	11188000	+		19337	24447	13043	13052	22354	22354					0.17201612756116447
IWLSMASLVIF	11	Unmodified	_IWLSMASLVIF_					0	0	0		ENSG00000159461|ENST00000290649|AMFR	ENSG00000159461|ENST00000290649|AMFR	ENSG00000159461|ENST00000290649|AMFR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3590698242188	2	640.359585	1278.70462	-0.024279	-1.5547E-05	-0.91724	-0.00058736	-0.94152	-0.00060291	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.68378	1	10231	10231		34.173	2.5383	1	448130			19338	5533	13044	13053	22355	22355					0.0764124839604392
IWLWWLWWHLH	11	Unmodified	_IWLWWLWWHLH_					0	0	0			REV__ENST00000361229.8_1_X:101976007-102003782:+|nuORF	REV__ENST00000361229.8_1_X:101976007-102003782:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7755126953125	4	419.722579	1674.86121	-1.4982	-0.00062883	-4.2976	-0.0018038	-5.7958	-0.0024326	419.7199743102575	41.314	0.17368	41.948	41.85	42.023	0.6339					6	4	2	0	0	0	0.18404	1	3631	3631		3.6191	3.2477	1	198150	+		19339	25496	13045	13054	22356	22356					0.05077294401394283
IWMALVLL	8	Oxidation (M)	_IWM(Oxidation (M))ALVLL_		IWM(1)ALVLL		IWM(44)ALVLL	0	0	1		nc|ENSG00000135409|Q16671-3|AMHR2;nc|ENSG00000135409|Q16671-2|AMHR2;ENSG00000135409|ENST00000257863|AMHR2	nc|ENSG00000135409|Q16671-3|AMHR2	nc|ENSG00000135409|Q16671-3|AMHR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7906799316406	2	487.790807	973.56706	-1.5393	-0.00075085	1.1332	0.00055277	-0.40607	-0.00019808	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.91333	1	8043	8043		43.626	10.133	1	1760400			19340	4014	13046	13055	22357	22357		71			0.0792196458729677
IWMALVLL	8	Oxidation (M)	_IWM(Oxidation (M))ALVLL_		IWM(1)ALVLL		IWM(44)ALVLL	0	0	1		nc|ENSG00000135409|Q16671-3|AMHR2;nc|ENSG00000135409|Q16671-2|AMHR2;ENSG00000135409|ENST00000257863|AMHR2	nc|ENSG00000135409|Q16671-3|AMHR2	nc|ENSG00000135409|Q16671-3|AMHR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.79046630859375	2	487.790807	973.56706	-0.48923	-0.00023864	0.15358	7.4913E-05	-0.33565	-0.00016373	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.91333	1	9782	9782		43.626	10.133	1	1599600			19341	4014	13046	13055	22358	22358		71			0.0792196458729677
IWMWPHHKRLQ	11	Unmodified	_IWMWPHHKRLQ_					0	0	0			REV__ENSG00000135749|ENST00000258229|PCNX2	REV__ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.6102294921875	3	511.274957	1530.80304	0.13027	6.6601E-05	0.13091	6.6933E-05	0.26118	0.00013353	511.27499558915355	38.116	0.603	38.088	37.774	38.377	-0.027843					31	13	3	0	0	0	0.78391	1	2582	2582		14.694	1.7362	1	130670	+		19342	19245	13047	13056	22359	22359					0.05887289484462599
IWNLGAKPWRL	11	Unmodified	_IWNLGAKPWRL_					0	0	0			REV__ENST00000324685.10_1_16:30786705-30787371:+|nuORF	REV__ENST00000324685.10_1_16:30786705-30787371:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9324035644531	3	451.931185	1352.77173	-0.99129	-0.000448	4.2998	0.0019432	3.3085	0.0014952	451.9330862164875	100.92	2.2384	100.92	100.04	102.28	0					149	53	4	0	0	0	0.74771	1	10296	10296		22.562	0.78116	1	534780	+		19343	25051	13048	13057	22360	22360					0.10945039722037109
IWNQKEPA	8	Unmodified	_IWNQKEPA_					0	0	0		L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|42|2|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|42|2|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|42|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.2586975097656	2	493.258717	984.50288	-1.4588	-0.00071956	1.4534	0.00071692	-0.0053517	-2.6398E-06	493.2595285153511	54.743	0.5271	54.743	54.471	54.998	0					42	21	3	0	0	0	0.67263	1	4605	4605		68.485	9.7027	1	233990			19344	14639	13049	13058	22361	22361					0.010009007547068904
IWPALPLWVL	10	Unmodified	_IWPALPLWVL_					0	0	0		ENST00000557072.1_1_14:98602423-98605356:+|nuORF	ENST00000557072.1_1_14:98602423-98605356:+|nuORF	ENST00000557072.1_1_14:98602423-98605356:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3659057617188	2	604.365527	1206.7165	-0.16822	-0.00010167	1.7271	0.0010438	1.5589	0.00094215	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.85976	1	11049	11049		35.201	1.0282	1	47715000			19345	13762	13050	13059	22362	22362					0.12141233201555224
IWQARLGT	8	Unmodified	_IWQARLGT_					0	0	0			REV__ENST00000519094.5_1_8:42196130-42196735:+|nuORF	REV__ENST00000519094.5_1_8:42196130-42196735:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7669982910156	2	472.769252	943.52395	-0.93003	-0.00043969	-3.4036	-0.0016091	-4.3336	-0.0020488	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.87922	1	8042	8042		31.955	1.4512	1	526610	+		19346	28071	13051	13060	22363	22363					0.04992910854230104
IWRNWKRKNTK	11	Unmodified	_IWRNWKRKNTK_					0	0	0		nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;nc|ENSG00000157193|Q14114-3|LRP8;ENSG00000157193|ENST00000306052|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8050537109375	3	510.631909	1528.8739	3.4827	0.0017784	0.15369	7.848E-05	3.6364	0.0018569	510.63198152872735	102.58	0.2991	102.88	102.6	102.9	0.29865					8	6	2	0	0	0	0.18258	1	12476	12476		5.4129	0.52678	1	92848			19347	5415	13052	13061	22364	22364					0.13061705793620604
IWRNWKRKNTK	11	Unmodified	_IWRNWKRKNTK_					0	0	0		nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;nc|ENSG00000157193|Q14114-3|LRP8;ENSG00000157193|ENST00000306052|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	510.631909	1528.8739	-0.66576	-0.00033996	5.2425	0.002677	4.5767	0.002337	510.9690388881403	102.85	0.12615	102.85	102.79	102.91	0	-0.076452	0.0027672	NaN	5.4129	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54334			19348	5415	13052	13061							0.13061705793620604
IWRNWKRKNTK	11	Unmodified	_IWRNWKRKNTK_					0	0	0		nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;nc|ENSG00000157193|Q14114-3|LRP8;ENSG00000157193|ENST00000306052|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	510.631909	1528.8739	3.0125	0.0015383	1.3348	0.00068159	4.3473	0.0022199	510.6325792981732	102.96	0.37524	102.92	102.58	102.95	-0.047005	-0.007678	-0.0032189	NaN	5.4129	9	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153010			19349	5415	13052	13061							0.13061705793620604
IWRNWKRKNTK	11	Unmodified	_IWRNWKRKNTK_					0	0	0		nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;nc|ENSG00000157193|Q14114-3|LRP8;ENSG00000157193|ENST00000306052|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	510.631909	1528.8739	0.81331	0.0004153	4.2003	0.0021448	5.0137	0.0025601	510.96835466128147	102.83	0.57423	102.96	102.48	103.05	0.12621	0.030378	0.0011708	NaN	5.4129	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181890			19350	5415	13052	13061							0.13061705793620604
IWRNWKRKNTK	11	Unmodified	_IWRNWKRKNTK_					0	0	0		nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;nc|ENSG00000157193|Q14114-3|LRP8;ENSG00000157193|ENST00000306052|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	510.631909	1528.8739	-1.5804	-0.00080698	6.2532	0.0031931	4.6728	0.0023861	510.96951984515084	102.89	0.43988	103.03	102.61	103.05	0.13569	0.10389	0.0043156	NaN	5.4129	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	194210			19351	5415	13052	13061							0.13061705793620604
IWSGSDPEAGR	11	Unmodified	_IWSGSDPEAGR_					0	0	0			REV__ENST00000307750.4_1_9:37442508-37465359:-|nuORF	REV__ENST00000307750.4_1_9:37442508-37465359:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	587.7803344726562	2	587.778002	1173.54145	0.36061	0.00021196	3.2166	0.0018907	3.5772	0.0021026	587.7799857056675	63.701	0.43349	63.667	63.461	63.895	-0.034252					29	15	2	0	0	0	0.48529	1	6071	6071		52.937	10.541	1	136050	+		19352	24851	13053	13062	22365	22365					-0.038378384014322364
IWVFDIII	8	Unmodified	_IWVFDIII_					0	0	0			REV__ENSG00000168447|ENST00000343070|SCNN1B	REV__ENSG00000168447|ENST00000343070|SCNN1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.803466796875	2	509.802229	1017.5899	-0.93407	-0.00047619	3.9984	0.0020384	3.0643	0.0015622	509.8042014095356	84.682	2.4835	84.682	83.134	85.618	0					128	59	3	0	0	0	0.86791	1	7980	7980		28.254	0.17279	1	609880	+		19353	21488	13054	13063	22366	22366					0.08181306976428004
IWVFDIII	8	Unmodified	_IWVFDIII_					0	0	0			REV__ENSG00000168447|ENST00000343070|SCNN1B	REV__ENSG00000168447|ENST00000343070|SCNN1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8035888671875	2	509.802229	1017.5899	-0.89954	-0.00045859	3.9055	0.001991	3.006	0.0015324	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.89457	1	8401	8401		37.028	2.8559	1	1874600	+		19354	21488	13054	13063	22367	22367					0.08181306976428004
IWVFDIII	8	Unmodified	_IWVFDIII_					0	0	0			REV__ENSG00000168447|ENST00000343070|SCNN1B	REV__ENSG00000168447|ENST00000343070|SCNN1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.803955078125	2	509.802229	1017.5899	-0.073627	-3.7535E-05	2.9787	0.0015185	2.905	0.001481	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.89457	1	10194	10194		37.028	1.8278	1	3087300	+		19355	21488	13054	13063	22368	22368					0.08181306976428004
IWVGVVPRG	9	Unmodified	_IWVGVVPRG_					0	0	0		nc|ENSG00000258366|Q9NZ71-8|RTEL1;nc|ENSG00000258366|Q9NZ71-4|RTEL1;nc|ENSG00000258366|Q9NZ71|RTEL1;nc|ENSG00000258366|Q9NZ71-7|RTEL1;ENSG00000258366|ENST00000360203|RTEL1;nc|ENSG00000258366|Q9NZ71-2|RTEL1;ENST00000480273.5_1_20:62319266-62327135:+|nuORF;nc|ENSG00000258366|Q9NZ71-9|RTEL1	nc|ENSG00000258366|Q9NZ71-8|RTEL1	nc|ENSG00000258366|Q9NZ71-8|RTEL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7960205078125	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.7932	1	4245	4245		20.482	2.1574	1	781720			19356	8910	13055	13064	22369	22369					0.08446074267999393
IWVRWYSHWWM	11	Unmodified	_IWVRWYSHWWM_					0	0	0			REV__ENST00000295992.7_1_3:142606565-142606607:-|nuORF	REV__ENST00000295992.7_1_3:142606565-142606607:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.9329223632812	3	550.599329	1648.77616	0.29436	0.00016207	3.0304	0.0016686	3.3248	0.0018306	550.6010461865411	18.389	0.63671	18.312	18.121	18.758	-0.07671					40	17	4	0	0	0	0.88596	1	334	334		3.6191	0	1	246790	+		19357	24705	13056	13065	22370	22370					-0.02227819126733266
IWYLLAYT	8	Unmodified	_IWYLLAYT_					0	0	0		ENST00000375856.4_1_13:110408094-110408364:-|nuORF	ENST00000375856.4_1_13:110408094-110408364:-|nuORF	ENST00000375856.4_1_13:110408094-110408364:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.7813110351562	2	521.784036	1041.55352	-0.50649	-0.00026428	-4.0027	-0.0020885	-4.5092	-0.0023528	521.7818171549486	48.167	1.0744	48.636	48.119	49.194	0.46941					72	26	4	0	0	0	0.92176	1	4655	4655		46.766	2.6496	1	7594000			19358	10808	13057	13066	22371	22371					0.03440430079695034
IWYLLAYT	8	Unmodified	_IWYLLAYT_					0	0	0		ENST00000375856.4_1_13:110408094-110408364:-|nuORF	ENST00000375856.4_1_13:110408094-110408364:-|nuORF	ENST00000375856.4_1_13:110408094-110408364:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7819213867188	2	521.784036	1041.55352	-0.36396	-0.00018991	-4.0082	-0.0020914	-4.3721	-0.0022813	521.781827522837	48.002	1.084	48.925	48.503	49.587	0.92315					72	26	4	0	0	0	0.89567	1	4639	4639		57.453	9.537	1	8503600			19359	10808	13057	13066	22372	22372					0.03440430079695034
IWYVIGRR	8	Unmodified	_IWYVIGRR_					0	0	0		ENSG00000089558|ENST00000264661|KCNH4	ENSG00000089558|ENST00000264661|KCNH4	ENSG00000089558|ENST00000264661|KCNH4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8169555664062	2	531.813993	1061.61343	1.0705	0.00056928	4.463	0.0023735	5.5334	0.0029427	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.88915	1	10359	10359		35.201	1.0282	1	4490200			19360	1626	13058	13067	22373	22373					0.08509165533587293
IYAIGGYGPA	10	Unmodified	_IYAIGGYGPA_					0	0	0		ENSG00000179454|ENST00000396128|KLHL28	ENSG00000179454|ENST00000396128|KLHL28	ENSG00000179454|ENST00000396128|KLHL28	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79595947265625	2	491.255643	980.496732	-0.68426	-0.00033615	0.068444	3.3624E-05	-0.61582	-0.00030252	491.2554579285411	61.042	0.62895	61.05	60.553	61.181	0.0081177					47	25	3	0	0	0	0.37624	1	5258	5258		12.959	0	1	276270			19361	7270	13059	13068	22374	22374					0.005703825231876181
IYAKNIGKTV	10	Unmodified	_IYAKNIGKTV_					0	0	0			REV__ENSG00000125888|ENST00000246090|BANF2	REV__ENSG00000125888|ENST00000246090|BANF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8308715820312	2	553.832049	1105.64954	0.29912	0.00016566	-3.3725	-0.0018678	-3.0734	-0.0017021	553.8300566957491	102.35	0.6834	102.54	102.25	102.94	0.19484					39	16	3	0	0	0	0.86047	1	10780	10780		23.523	0.48021	1	507320	+		19362	18678	13060	13069	22375	22375					0.10094577919790026
IYCLIYLLRLF	11	Unmodified	_IYCLIYLLRLF_					0	0	0		ENST00000360612.4_1_22:50357064-50357445:+|nuORF	ENST00000360612.4_1_22:50357064-50357445:+|nuORF	ENST00000360612.4_1_22:50357064-50357445:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	476.7406921386719	3	477.280715	1428.82032	-0.18817	-8.9809E-05	1.4813	0.00070701	1.2932	0.0006172	477.6158426689597	45.442	0.20164	45.906	45.799	46	0.46313					6	4	2	0	0	0	0.17811	1	4222	4222		20.03	14.618	1	101700			19363	10451	13061	13070	22376	22376					0.12305772246895685
IYCLIYLLRLF	11	Unmodified	_IYCLIYLLRLF_					0	0	0		ENST00000360612.4_1_22:50357064-50357445:+|nuORF	ENST00000360612.4_1_22:50357064-50357445:+|nuORF	ENST00000360612.4_1_22:50357064-50357445:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	477.280715	1428.82032	-1.5813	-0.00075474	2.1716	0.0010365	0.59029	0.00028173	477.28173764148477	45.408	0.23882	46.304	46.208	46.447	0.89542	0.19905	0.00048416	NaN	20.03	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97367			19364	10451	13061	13070							0.12305772246895685
IYDEDEVLL	9	Unmodified	_IYDEDEVLL_					0	0	0		nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000468280.5_1_19:52693376-52714746:+|nuORF	nc|ENSG00000137713|P30154-2|PPP2R1B	nc|ENSG00000137713|P30154-2|PPP2R1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.7742309570312	2	554.774062	1107.53357	-0.028196	-1.5642E-05	0.19864	0.0001102	0.17044	9.4557E-05	554.7740138866297	78.16	2.3927	78.565	78.018	80.411	0.40531					136	56	5	0	0	0	0.0018778	4	8924	8902;8912;8924;8936		143.02	57.66	1	4295800			19365	14944	13062	13071	22377;22378;22379;22380	22379					-0.015894104415792754
IYDEDEVLL	9	Unmodified	_IYDEDEVLL_					0	0	0		nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000468280.5_1_19:52693376-52714746:+|nuORF	nc|ENSG00000137713|P30154-2|PPP2R1B	nc|ENSG00000137713|P30154-2|PPP2R1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7737426757812	2	554.774062	1107.53357	-0.16813	-9.3273E-05	0.085458	4.741E-05	-0.08267	-4.5863E-05	554.7740351677778	78.09	1.4177	78.653	78.254	79.672	0.56332					63	33	2	0	0	0	0.09311	4	8938	8917;8926;8938;8950		94.006	18.098	1	4128700			19366	14944	13062	13071	22381;22382;22383;22384	22383					-0.015894104415792754
IYDEIQQEM	9	Oxidation (M)	_IYDEIQQEM(Oxidation (M))_		IYDEIQQEM(1)		IYDEIQQEM(130)	0	0	1		nc|ENSG00000119042|Q9UPW6-2|SATB2;ENSG00000119042|ENST00000417098|SATB2;ENST00000467628.1_1_3:18393447-18419817:-|nuORF;ENSG00000182568|ENST00000338745|SATB1;nc|ENSG00000182568|Q01826-2|SATB1	nc|ENSG00000119042|Q9UPW6-2|SATB2;ENST00000467628.1_1_3:18393447-18419817:-|nuORF	ENST00000467628.1_1_3:18393447-18419817:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	592.7606811523438	2	592.760629	1183.5067	0.1673	9.9167E-05	0.44932	0.00026634	0.61661	0.0003655	592.7607412467489	50.236	0.82339	50.683	50.266	51.09	0.44761					46	19	3	0	0	0	0.018862	3	4946	4910;4946;4959		126.24	11.736	1	1662700			19367	3053;7461	13063	13072	22385;22386;22387	22386		60			-0.07770842324430305
IYDEIQQEM	9	Oxidation (M)	_IYDEIQQEM(Oxidation (M))_		IYDEIQQEM(1)		IYDEIQQEM(160)	0	0	1		nc|ENSG00000119042|Q9UPW6-2|SATB2;ENSG00000119042|ENST00000417098|SATB2;ENST00000467628.1_1_3:18393447-18419817:-|nuORF;ENSG00000182568|ENST00000338745|SATB1;nc|ENSG00000182568|Q01826-2|SATB1	nc|ENSG00000119042|Q9UPW6-2|SATB2;ENST00000467628.1_1_3:18393447-18419817:-|nuORF	ENST00000467628.1_1_3:18393447-18419817:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	592.76025390625	2	592.760629	1183.5067	0.73363	0.00043487	-0.20813	-0.00012337	0.5255	0.0003115	592.760289673216	50.04	0.81931	50.885	50.517	51.336	0.84501					54	19	4	0	0	0	2.4207E-08	3	4929	4906;4929;4942		158.07	16.812	1	1750800			19368	3053;7461	13063	13072	22388;22389;22390	22389		60			-0.07770842324430305
IYDEIQQEM	9	Unmodified	_IYDEIQQEM_					0	0	0		nc|ENSG00000119042|Q9UPW6-2|SATB2;ENSG00000119042|ENST00000417098|SATB2;ENST00000467628.1_1_3:18393447-18419817:-|nuORF;ENSG00000182568|ENST00000338745|SATB1;nc|ENSG00000182568|Q01826-2|SATB1	nc|ENSG00000119042|Q9UPW6-2|SATB2;ENST00000467628.1_1_3:18393447-18419817:-|nuORF	ENST00000467628.1_1_3:18393447-18419817:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.7633056640625	2	584.763171	1167.51179	-1.3541	-0.00079181	1.5347	0.00089745	0.18065	0.00010564	584.7638194570354	63.648	1.2457	64.035	63.531	64.776	0.3868					60	28	3	0	0	0	4.5757E-05	4	6848	6838;6848;6860;6872		150.36	32.551	1	1010400			19369	3053;7461	13063	13073	22391;22392;22393;22394	22392					-0.06526538461798737
IYDEIQQEM	9	Unmodified	_IYDEIQQEM_					0	0	0		nc|ENSG00000119042|Q9UPW6-2|SATB2;ENSG00000119042|ENST00000417098|SATB2;ENST00000467628.1_1_3:18393447-18419817:-|nuORF;ENSG00000182568|ENST00000338745|SATB1;nc|ENSG00000182568|Q01826-2|SATB1	nc|ENSG00000119042|Q9UPW6-2|SATB2;ENST00000467628.1_1_3:18393447-18419817:-|nuORF	ENST00000467628.1_1_3:18393447-18419817:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.7632446289062	2	584.763171	1167.51179	-0.056193	-3.286E-05	0.28663	0.00016761	0.23044	0.00013475	584.7631081604039	63.515	0.93036	64.069	63.755	64.686	0.55449					50	21	4	0	0	0	3.5946E-20	4	6859	6837;6848;6859;6870		176.44	33.994	1	1168600			19370	3053;7461	13063	13073	22395;22396;22397;22398	22397					-0.06526538461798737
IYDFIGEFM	9	Unmodified	_IYDFIGEFM_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENSG00000105677|ENST00000222284|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF	nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.7615966796875	2	567.762443	1133.51033	1.9105	0.0010847	-1.566	-0.00088911	0.34449	0.00019559	567.7613415774385	103.95	0.65791	104.14	103.89	104.54	0.18888					31	15	3	0	0	0	0.073112	2	12644	12644;12656		99.375	54.998	1	232810			19371	2241;12353	13064	13074	22399;22400	22399					-0.05108127759876879
IYDGPIHL	8	Unmodified	_IYDGPIHL_					0	0	0		nc|ENSG00000135048|Q9UHN6-2|CEMIP2;ENSG00000135048|ENST00000377044|CEMIP2	nc|ENSG00000135048|Q9UHN6-2|CEMIP2	nc|ENSG00000135048|Q9UHN6-2|CEMIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2511291503906	2	464.25036	926.486168	-1.3162	-0.00061105	1.4169	0.00065779	0.10069	4.6745E-05	464.2508553442998	59.206	0.74244	59.598	59.191	59.933	0.39179					34	17	3	0	0	0	0.73619	1	6237	6237		65.897	10.393	1	523950			19372	3977	13065	13075	22401	22401					0.01998399868762135
IYDGPIHL	8	Unmodified	_IYDGPIHL_					0	0	0		nc|ENSG00000135048|Q9UHN6-2|CEMIP2;ENSG00000135048|ENST00000377044|CEMIP2	nc|ENSG00000135048|Q9UHN6-2|CEMIP2	nc|ENSG00000135048|Q9UHN6-2|CEMIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.24969482421875	2	464.25036	926.486168	-0.5035	-0.00023375	0.98836	0.00045885	0.48486	0.0002251	464.2505231931633	59.098	0.61877	59.651	59.3	59.919	0.55323					34	15	3	0	0	0	0.73619	2	6227	6227;6238		65.897	17.982	1	509740			19373	3977	13065	13075	22402;22403	22402					0.01998399868762135
IYDILRGVE	9	Unmodified	_IYDILRGVE_					0	0	0			REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.3004150390625	2	539.300581	1076.58661	-0.88218	-0.00047576	0.083037	4.4782E-05	-0.79914	-0.00043098	539.3003993125719	60.567	0.56427	61.12	60.855	61.419	0.55323					30	15	3	0	0	0	0.48102	1	6464	6464		52.937	0	1	1132800	+		19374	18629	13066	13076	22404	22404					0.05138012131783398
IYDKFIAQL	9	Unmodified	_IYDKFIAQL_					0	0	0		nc|ENSG00000160783|Q6P1K2-4|PMF1;nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1;ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1	nc|ENSG00000160783|Q6P1K2-4|PMF1	nc|ENSG00000160783|Q6P1K2-4|PMF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.8131713867188	2	555.813325	1109.6121	-0.27955	-0.00015538	0.20237	0.00011248	-0.077187	-4.2902E-05	555.8133850187799	70.454	1.3646	70.838	70.469	71.834	0.38416					77	32	4	0	0	0	0.002448	6	7790	7778;7790;7802;7814;7826;7838		141.52	56.605	1	1591600			19375	5605	13067	13077	22405;22406;22407;22408;22409;22410	22406					0.061674866541807205
IYDKFIAQL	9	Unmodified	_IYDKFIAQL_					0	0	0		nc|ENSG00000160783|Q6P1K2-4|PMF1;nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1;ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1	nc|ENSG00000160783|Q6P1K2-4|PMF1	nc|ENSG00000160783|Q6P1K2-4|PMF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.8131713867188	2	555.813325	1109.6121	-0.26289	-0.00014612	0.36754	0.00020428	0.10465	5.8164E-05	555.8133910098038	70.416	1.2834	70.964	70.58	71.863	0.54722					75	31	4	0	0	0	0.014602	6	7806	7806;7817;7829;7841;7853;7870		129.42	52.647	1	1548600			19376	5605	13067	13077	22411;22412;22413;22414;22415;22416	22411					0.061674866541807205
IYDKTSVLF	9	Unmodified	_IYDKTSVLF_					0	0	0		ENST00000575471.2_1_16:31925765-31927799:+|nuORF;ENSG00000185947|ENST00000300870|ZNF267	ENST00000575471.2_1_16:31925765-31927799:+|nuORF	ENST00000575471.2_1_16:31925765-31927799:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2974243164062	2	543.297507	1084.58046	-1.4063	-0.00076406	0.86028	0.00046739	-0.54606	-0.00029667	543.2978497251211	60.216	0.72805	60.607	60.373	61.101	0.39077					48	20	3	0	0	0	0.19818	1	6401	6401		74.255	8.4519	1	1233800			19377	7760	13068	13078	22417	22417					0.04155493900225338
IYDKTSVLF	9	Unmodified	_IYDKTSVLF_					0	0	0		ENST00000575471.2_1_16:31925765-31927799:+|nuORF;ENSG00000185947|ENST00000300870|ZNF267	ENST00000575471.2_1_16:31925765-31927799:+|nuORF	ENST00000575471.2_1_16:31925765-31927799:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.2974243164062	2	543.297507	1084.58046	-0.85759	-0.00046592	0.41443	0.00022516	-0.44316	-0.00024077	543.2977605762965	60.081	0.71462	60.635	60.355	61.07	0.55323					45	19	3	0	0	0	0.065196	3	6386	6365;6376;6386		101.6	19.296	1	1335100			19378	7760	13068	13078	22418;22419;22420	22420					0.04155493900225338
IYDPNLAFL	9	Unmodified	_IYDPNLAFL_					0	0	0		ENSG00000197943|ENST00000564138|PLCG2	ENSG00000197943|ENST00000564138|PLCG2	ENSG00000197943|ENST00000564138|PLCG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.2849731445312	2	533.2844	1064.55425	-1.4758	-0.00078701	1.8381	0.00098024	0.36235	0.00019323	533.2852020444599	90.458	0.75912	90.929	90.601	91.36	0.47068					41	18	3	0	0	0	0.15959	1	10741	10741		82.241	14.747	1	950920			19379	8216	13069	13079	22421	22421					0.024552247287601858
IYDPNLAFL	9	Unmodified	_IYDPNLAFL_					0	0	0		ENSG00000197943|ENST00000564138|PLCG2	ENSG00000197943|ENST00000564138|PLCG2	ENSG00000197943|ENST00000564138|PLCG2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	533.2844	1064.55425	1.3498	0.00071983	-1.0233	-0.0005457	0.32652	0.00017413	533.2836426407571	90.388	0.81444	90.839	90.528	91.342	0.45058	-0.045129	-0.0019445	NaN	82.241	42	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	920780			19380	8216	13069	13079							0.024552247287601858
IYDSVKVYF	9	Unmodified	_IYDSVKVYF_					0	0	0		nc|ENSG00000075415|Q00325|SLC25A3;ENST00000547869.1_1_12:98994914-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENSG00000075415|ENST00000552981|SLC25A3	nc|ENSG00000075415|Q00325|SLC25A3	nc|ENSG00000075415|Q00325|SLC25A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.2972412109375	2	567.297507	1132.58046	0.82471	0.00046786	-0.87851	-0.00049838	-0.053804	-3.0523E-05	567.2965618529681	67.548	0.78741	67.933	67.526	68.314	0.38515					40	19	3	0	0	0	0.065196	3	7398	7379;7387;7398		101.6	38.294	1	408590			19381	14780	13070	13080	22422;22423;22424	22424					0.019474939002293468
IYDSVKVYF	9	Unmodified	_IYDSVKVYF_					0	0	0		nc|ENSG00000075415|Q00325|SLC25A3;ENST00000547869.1_1_12:98994914-98995303:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENSG00000075415|ENST00000552981|SLC25A3	nc|ENSG00000075415|Q00325|SLC25A3	nc|ENSG00000075415|Q00325|SLC25A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.2962036132812	2	567.297507	1132.58046	0.67906	0.00038523	-1.1062	-0.00062757	-0.42718	-0.00024234	567.2964848936921	67.388	1.1704	67.936	67.489	68.659	0.54819					43	27	4	0	0	0	0.17181	1	7408	7408		79.713	0.26157	1	564990			19382	14780	13070	13080	22425	22425					0.019474939002293468
IYDTLLSRYK	10	Unmodified	_IYDTLLSRYK_					0	0	0			REV__nc|ENSG00000187741|O15360-3|FANCA	REV__nc|ENSG00000187741|O15360-3|FANCA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.77392578125	3	424.571322	1270.69214	0.50454	0.00021421	2.2099	0.00093826	2.7144	0.0011525	424.57235559733476	16.5	0.18399	15.901	15.74	15.924	-0.59873					5	3	2	0	0	0	0.37624	1	119	119		12.957	2.8536	1	9078.6	+		19383	22940	13071	13081	22426	22426					0.06761928257355976
IYDVQHANL	9	Unmodified	_IYDVQHANL_					0	0	0		ENSG00000140395|ENST00000267973|SKIC8	ENSG00000140395|ENST00000267973|SKIC8	ENSG00000140395|ENST00000267973|SKIC8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7744140625	2	536.774731	1071.53491	-1.0784	-0.00057888	1.0743	0.00057666	-0.0041362	-2.2202E-06	536.7749984543697	48.32	1.0001	48.789	48.194	49.194	0.46941					62	24	4	0	0	0	0.026116	2	4656	4645;4656		120.87	49.573	1	1735500			19384	4428	13072	13082	22427;22428	22428					0.0020026843783398363
IYDVQHANL	9	Unmodified	_IYDVQHANL_					0	0	0		ENSG00000140395|ENST00000267973|SKIC8	ENSG00000140395|ENST00000267973|SKIC8	ENSG00000140395|ENST00000267973|SKIC8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7748413085938	2	536.774731	1071.53491	-0.75032	-0.00040275	0.71287	0.00038265	-0.037452	-2.0103E-05	536.7747763169037	48.12	0.88536	49.043	48.503	49.388	0.92315					57	21	4	0	0	0	0.029359	2	4635	4635;4647		118.74	27.283	1	1648100			19385	4428	13072	13082	22429;22430	22429					0.0020026843783398363
IYEATVDELSK	11	Unmodified	_IYEATVDELSK_					0	0	0			REV__nc|ENSG00000039560|Q9P0K7-4|RAI14	REV__nc|ENSG00000039560|Q9P0K7-4|RAI14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3248291015625	2	634.32445	1266.63435	1.6756	0.0010629	-0.37049	-0.00023501	1.3051	0.00082786	634.3241495458176	57.188	1.611	57.743	57.355	58.966	0.55512					111	39	4	0	0	0	0.19725	1	6046	6046		79.713	1.4488	1	5227300	+		19386	29683	13073	13083	22431	22431					0.011696215412712263
IYERLKPI	8	Unmodified	_IYERLKPI_					0	0	0			REV__ENSG00000189233|ENST00000413272|NUGGC	REV__ENSG00000189233|ENST00000413272|NUGGC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3140869140625	2	516.316035	1030.61752	-0.63969	-0.00033028	-3.0425	-0.0015709	-3.6822	-0.0019012	516.3144152653146	102.55	1.0925	102.55	101.98	103.08	0					67	27	3	0	0	0	0.81548	1	10528	10528		20.482	1.3783	1	640710	+		19387	23072	13074	13084	22432	22432					0.10343210236646883
IYFGQIPTN	9	Unmodified	_IYFGQIPTN_					0	0	0			REV__ENSG00000064309|ENST00000531738|CDON	REV__ENSG00000064309|ENST00000531738|CDON	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.780517578125	2	526.7742	1051.53385	0.0025434	1.3398E-06	3.7713	0.0019866	3.7738	0.0019879	526.7761320477198	48.285	0.36659	49.189	48.963	49.33	0.90424					11	8	2	0	0	0	0.20789	1	4634	4634		26.693	10.22	1	413860	+		19388	16474	13075	13085	22433	22433					0.010140540689462796
IYFVFTRKNP	10	Unmodified	_IYFVFTRKNP_					0	0	0		ENSG00000115902|ENST00000234256|SLC1A4	ENSG00000115902|ENST00000234256|SLC1A4	ENSG00000115902|ENST00000234256|SLC1A4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3623046875	2	642.858598	1283.70264	7.1753	0.0046127	-0.87237	-0.00056081	6.3029	0.0040519	643.3581639457337	111.52	0.41818	111.56	111.3	111.71	0.049095					54	15	4	0	0	0	0.37624	1	13521	13521		10.866	0	1	8636300			19389	2881	13076	13086	22434	22434					0.07213955702491148
IYGHKLSILIP	11	Unmodified	_IYGHKLSILIP_					0	0	0			REV__ENSG00000110880|ENST00000261401|CORO1C	REV__ENSG00000110880|ENST00000261401|CORO1C	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3834838867188	2	627.384448	1252.75434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.1	1	119.03	118.53	119.53	-0.07531								0	0	0	0.56276	1	12775	12775		14.865	0.72775	1		+		19390	17838	13077	13087	22435	22435					0.13807699396375028
IYGICIPPL	9	Unmodified	_IYGICIPPL_					0	0	0			REV__ENST00000463718.5_1_12:21428225-21457481:-|nuORF	REV__ENST00000463718.5_1_12:21428225-21457481:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.780517578125	2	494.780439	987.546325	-0.3637	-0.00017995	0.14728	7.287E-05	-0.21642	-0.00010708	494.78036117734723	86.114	3.3197	86.558	85.468	88.787	0.44331					170	80	3	0	0	0	0.78292	1	10085	10085		29.842	4.2675	1	514260	+		19391	16873	13078	13088	22436	22436					0.052053742076282106
IYGKIFIVSKQ	11	Unmodified	_IYGKIFIVSKQ_					0	0	0		nc|ENSG00000290584|Q9P1P4|TAAR3P	nc|ENSG00000290584|Q9P1P4|TAAR3P	nc|ENSG00000290584|Q9P1P4|TAAR3P	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3993530273438	2	648.389731	1294.76491	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.95	1	113.98	113.48	114.48	0.027321								0	0	0	0.56276	1	12465	12465		22.58	2.5829	1				19392	15337	13079	13089	22437	22437					0.12931682050771087
IYGTRKFK	8	Unmodified	_IYGTRKFK_					0	0	0		ENSG00000197629|ENST00000361050|MPEG1	ENSG00000197629|ENST00000361050|MPEG1	ENSG00000197629|ENST00000361050|MPEG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8000183105469	2	506.800552	1011.58655	0.050513	2.56E-05	-0.36872	-0.00018687	-0.31821	-0.00016127	506.80028093327485	25.966	0.97153	25.709	25.424	26.395	-0.25721					59	21	4	0	0	0	0.37624	2	1391	1381;1391		96.19	11.275	1	1527700			19393	8184	13080	13090	22438;22439	22439					0.08122056922422871
IYGTRKFK	8	Unmodified	_IYGTRKFK_					0	0	0		ENSG00000197629|ENST00000361050|MPEG1	ENSG00000197629|ENST00000361050|MPEG1	ENSG00000197629|ENST00000361050|MPEG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.800048828125	2	506.800552	1011.58655	3.3125	0.0016788	-3.7434	-0.0018972	-0.43096	-0.00021841	506.7985401947884	26.02	1.0059	25.589	25.272	26.278	-0.4311					54	22	4	0	0	0	0.37302	2	1394	1384;1394		87.754	2.5089	1	1944600			19394	8184	13080	13090	22440;22441	22441					0.08122056922422871
IYHKPTANIIL	11	Unmodified	_IYHKPTANIIL_					0	0	0		L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8822021484375	2	641.87953	1281.74451	1.4722	0.00094496	3.0644	0.001967	4.5366	0.002912	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.74763	1	11599	11599		22.58	1.6327	1	4511200			19395	14641	13081	13091	22442	22442					0.11490511391002656
IYIRKELRRRL	11	Unmodified	_IYIRKELRRRL_					0	0	0			REV__nc|ENSG00000186625|O75449-2|KATNA1	REV__nc|ENSG00000186625|O75449-2|KATNA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.97430419921875	3	505.991326	1514.95215	-1.5955	-0.00080729	-1.7855	-0.00090344	-3.381	-0.0017107	505.99004242057924	107.88	0.18326	107.92	107.75	107.93	0.036125					8	4	3	0	0	0	0.18304	1	11520	11520		6.3209	3.1096	1	2087700	+		19396	17355	13082	13092	22443	22443					0.215271383788604
IYIRRYVFKLG	11	Unmodified	_IYIRRYVFKLG_					0	0	0		ENST00000394361.8_1_16:57596005-57608989:+|nuORF;ENSG00000159618|ENST00000349457|ADGRG5	ENST00000394361.8_1_16:57596005-57608989:+|nuORF	ENST00000394361.8_1_16:57596005-57608989:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.6247863769531	3	476.62224	1426.84489	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.8	1	118.83	118.33	119.33	0.026466								0	0	0	0.56276	1	13076	13076		6.3209	0.31984	1				19397	5538	13083	13093	22444	22444					0.1485416844463998
IYKLLLLA	8	Unmodified	_IYKLLLLA_					0	0	0		ENST00000511393.4_1_4:186321154-186321376:+|nuORF	ENST00000511393.4_1_4:186321154-186321376:+|nuORF	ENST00000511393.4_1_4:186321154-186321376:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.8221435546875	2	473.820421	945.62629	-0.98767	-0.00046798	3.7415	0.0017728	2.7538	0.0013048	473.8221193473481	37.753	0.93203	37.703	37.184	38.117	-0.050369					38	20	2	0	0	0	0.80127	1	2600	2600		16.705	2.0409	1	80539			19398	13019	13084	13094	22445	22445					0.1513018387313423
IYKRHLEA	8	Unmodified	_IYKRHLEA_					0	0	0		ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.2957153320312	2	515.295633	1028.57671	0.039155	2.0176E-05	-1.4377	-0.00074083	-1.3985	-0.00072065	515.2947822520104	64.702	0.70649	64.667	64.299	65.005	-0.034798					30	17	2	0	0	0	0.9295	1	6210	6210		55.504	4.1688	1	425860			19399	3059	13085	13095	22446	22446					0.06356868917032443
IYKTTRQRG	9	Unmodified	_IYKTTRQRG_					0	0	0			REV__ENSG00000077235|ENST00000356183|GTF3C1	REV__ENSG00000077235|ENST00000356183|GTF3C1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.823974609375	2	561.822547	1121.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.335	1	23.285	22.785	23.785	-0.050077								0	0	0	0.32159	1	768	768		23.042	2.0956	1		+		19400	16739	13086	13096	22447	22447					0.07459041348738538
IYLLSQLTF	9	Unmodified	_IYLLSQLTF_					0	0	0		ENSG00000279051|ENST00000302622|OR6Q1	ENSG00000279051|ENST00000302622|OR6Q1	ENSG00000279051|ENST00000302622|OR6Q1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.317626953125	2	549.3157	1096.61685	1.2725	0.00069901	2.3031	0.0012651	3.5756	0.0019641	549.3168832768056	100.86	2.4507	100.91	100.43	102.88	0.046356					139	58	4	0	0	0	0.76764	1	10903	10903		34.173	0	1	1880500			19401	9041	13087	13097	22448	22448					0.07240370796921525
IYLRPKTNYT	10	Unmodified	_IYLRPKTNYT_					0	0	0		ENSG00000173285|ENST00000641535|OR10K1	ENSG00000173285|ENST00000641535|OR10K1	ENSG00000173285|ENST00000641535|OR10K1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8930053710938	2	634.853512	1267.69247	-1.176	-0.0007466	-2.6255	-0.0016668	-3.8015	-0.0024134	634.8527273000145	105.99	0.2012	106.06	105.88	106.08	0.073112					6	4	2	0	0	0	0.37624	1	11247	11247		36.447	0	1	94429			19402	6849	13088	13098	22449	22449					0.06933347977224003
IYPCAICF	8	Carbamidomethyl (C)	_IYPCAIC(Carbamidomethyl (C))F_	IYPCAIC(1)F		IYPC(-43)AIC(43)F		0	1	0		nc|ENSG00000167395|O15015-1|ZNF646;ENSG00000167395|ENST00000300850|ZNF646	nc|ENSG00000167395|O15015-1|ZNF646	nc|ENSG00000167395|O15015-1|ZNF646	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7261962890625	2	493.727349	985.440145	-0.19684	-9.7184E-05	-0.45826	-0.00022626	-0.6551	-0.00032344	493.7268772260669	80.155	1.7003	80.682	80.359	82.06	0.52676					85	40	4	0	0	0	0.70106	1	9253	9253		67.327	11.823	2	1032800			19403	6291	13089	13099	22450	22450	79				-0.05315704629344964
IYPGPVVH	8	Unmodified	_IYPGPVVH_					0	0	0		ENSG00000129450|ENST00000250360|SIGLEC9;nc|ENSG00000129450|Q9Y336-2|SIGLEC9	ENSG00000129450|ENST00000250360|SIGLEC9	ENSG00000129450|ENST00000250360|SIGLEC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.2467041015625	2	441.247621	880.480688	0.22352	9.8628E-05	-4.3868	-0.0019357	-4.1633	-0.001837	441.2455323431299	23.25	0.66378	22.831	22.544	23.207	-0.41879					34	15	3	0	0	0	0.88393	1	1011	1011		33.493	1.5381	1	217780			19404	3588	13090	13100	22451	22451					0.03566721076947488
IYPSRDEY	8	Unmodified	_IYPSRDEY_					0	0	0		ENST00000442955.2_1_9:6669517-6669934:-|nuORF;ENSG00000121481|ENST00000367510|RNF2	ENST00000442955.2_1_9:6669517-6669934:-|nuORF	ENST00000442955.2_1_9:6669517-6669934:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	521.7462158203125	2	521.745639	1041.47673	0.25394	0.00013249	-0.29636	-0.00015462	-0.042421	-2.2133E-05	521.7454439619211	57.549	0.56262	57.52	57.288	57.851	-0.029865					30	17	2	0	0	0	0.9159	1	5320	5320		44.531	5.7249	1	235630			19405	3185	13091	13101	22452	22452					-0.04235413207425154
IYPVNSKDL	9	Unmodified	_IYPVNSKDL_					0	0	0		ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.25048828125	2	524.787307	1047.56006	0.71612	0.00037581	-2.0749	-0.0010889	-1.3588	-0.0007131	524.78572022915	50.912	0.49875	51.347	51.077	51.576	0.43505					18	11	2	0	0	0	0.20789	1	5018	5018		53.351	3.9099	1	240410			19406	7047	13092	13102	22453	22453					0.038183232404207956
IYQRKIKRRR	10	Unmodified	_IYQRKIKRRR_					0	0	0			REV__ENST00000320876.10_2_18:2688638-2694582:+|nuORF	REV__ENST00000320876.10_2_18:2688638-2694582:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28765869140625	3	472.972266	1415.89497	0.72549	0.00034314	0.2694	0.00012742	0.99489	0.00047056	472.97312873804407	95.146	0.12045	95.309	95.231	95.351	0.16308					4	2	2	0	0	0	0.37624	1	9745	9745		11.097	9.3404	1	34270	+		19407	25003	13093	13103	22454	22454					0.20365715893149172
IYRLPQVLRLH	11	Unmodified	_IYRLPQVLRLH_					0	0	0		nc|ENSG00000164663|Q70CQ1-2|USP49;ENSG00000164663|ENST00000682992|USP49	nc|ENSG00000164663|Q70CQ1-2|USP49	nc|ENSG00000164663|Q70CQ1-2|USP49	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.3115539550781	3	469.957623	1406.85104	-1.0903	-0.0005124	-3.4191	-0.0016068	-4.5094	-0.0021192	469.9557067884771	16.48	0.47638	16.528	16.351	16.828	0.047804					27	20	2	0	0	0	0.17729	1	156	156		23.378	5.5448	1	78468			19408	5987	13094	13104	22455	22455					0.1638868667614588
IYRSLCLYSDR	11	Unmodified	_IYRSLCLYSDR_					0	0	0			REV__nc|ENSG00000168481|Q8N145-2|LGI3	REV__nc|ENSG00000168481|Q8N145-2|LGI3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.9065856933594	3	463.571216	1387.69182	-2.0582	-0.00095411	2.053	0.00095172	-0.0051549	-2.3897E-06	463.5720092803442	24.43	0.36559	24.43	24.265	24.631	0					27	15	2	0	0	0	0.75457	1	839	839		21.032	1.7696	1	63845	+		19409	30016	13095	13105	22456	22456					0.013481852658514981
IYSLGGWLP	9	Unmodified	_IYSLGGWLP_					0	0	0			REV__ENSG00000214782|ENST00000529108|MS4A18	REV__ENSG00000214782|ENST00000529108|MS4A18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.27203369140625	2	503.273835	1004.53312	-0.24216	-0.00012187	-3.8696	-0.0019475	-4.1117	-0.0020693	503.2717238342241	53.147	1.1188	53.561	53.25	54.369	0.4139					45	26	2	0	0	0	0.3636	1	5366	5366		60.294	0.36318	1	919900	+		19410	23663	13096	13106	22457	22457					0.031032594199018604
IYSLRNKEVKD	11	Unmodified	_IYSLRNKEVKD_					0	0	0		nc|ENSG00000241356|P0C626|OR5G3;ENSG00000171133|ENST00000302681|OR2K2;ENSG00000150261|ENST00000279783|OR8K1;ENSG00000279961|ENST00000623286|OR8U3	nc|ENSG00000241356|P0C626|OR5G3	nc|ENSG00000241356|P0C626|OR5G3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.5880126953125	3	455.589265	1363.74596	-0.13158	-5.9946E-05	-2.3913	-0.0010894	-2.5229	-0.0011494	455.5883484427105	24.055	0.56832	23.673	23.449	24.017	-0.38178					24	12	3	0	0	0	0.72374	1	1130	1130		27.644	3.4121	1	115370			19411	15280	13097	13107	22458	22458					0.07864100689084808
IYSLRNKEVKD	11	Unmodified	_IYSLRNKEVKD_					0	0	0		nc|ENSG00000241356|P0C626|OR5G3;ENSG00000171133|ENST00000302681|OR2K2;ENSG00000150261|ENST00000279783|OR8K1;ENSG00000279961|ENST00000623286|OR8U3	nc|ENSG00000241356|P0C626|OR5G3	nc|ENSG00000241356|P0C626|OR5G3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	455.589265	1363.74596	1.3169	0.00059994	-3.4823	-0.0015865	-2.1654	-0.00098654	455.58757567387903	23.924	0.4607	23.35	23.094	23.555	-0.57415	-0.16175	-0.0006374	NaN	27.644	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110070			19412	15280	13097	13107							0.07864100689084808
IYSTEGQFAFL	11	Unmodified	_IYSTEGQFAFL_					0	0	0			REV__ENST00000548326.1_1_12:120899824-120899986:-|nuORF	REV__ENST00000548326.1_1_12:120899824-120899986:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	638.3167114257812	2	638.316428	1274.6183	-0.84859	-0.00054167	1.0313	0.00065831	0.18273	0.00011664	638.3170070427124	72.018	1.5366	72.403	71.877	73.413	0.38581					96	36	5	0	0	0	0.28254	1	8053	8053		75.043	3.1658	1	6693700	+		19413	28569	13098	13108	22459	22459					-0.008020399049428306
IYSTEGQFAFL	11	Unmodified	_IYSTEGQFAFL_					0	0	0			REV__ENST00000548326.1_1_12:120899824-120899986:-|nuORF	REV__ENST00000548326.1_1_12:120899824-120899986:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	638.3165893554688	2	638.316428	1274.6183	1.2406	0.0007919	-0.85069	-0.00054301	0.38992	0.00024889	638.3157834446171	71.864	1.5253	72.415	72.071	73.597	0.55009					104	36	5	0	0	0	0.48529	1	8030	8030		52.937	1.6012	1	7237600	+		19414	28569	13098	13108	22460	22460					-0.008020399049428306
IYSVEKSLF	9	Unmodified	_IYSVEKSLF_					0	0	0			REV__ENST00000526915.5_1_17:42786185-42811460:+|nuORF	REV__ENST00000526915.5_1_17:42786185-42811460:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.2967529296875	2	543.297507	1084.58046	-0.85759	-0.00046592	0.41443	0.00022516	-0.44316	-0.00024077	543.2977605762965	60.081	0.71462	60.635	60.355	61.07	0.55323					45	19	3	0	0	0	0.18601	1	6405	6405		76.774	2.5191	1	1335100	+		19415	20777	13099	13109	22461	22461					0.04155493900225338
IYTFLVPAYLL	11	Unmodified	_IYTFLVPAYLL_					0	0	0			REV__nc|ENSG00000251608|P0DN82|OR12D1	REV__nc|ENSG00000251608|P0DN82|OR12D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2587585449219	3	438.256564	1311.74786	0.21129	9.2599E-05	2.5281	0.001108	2.7394	0.0012006	438.2576083423229	29.948	1.2574	29.973	29.652	30.909	0.025013					91	35	4	0	0	0	0.66009	1	1490	1490		37.508	11.445	1	433100	+		19416	30237	13100	13110	22462	22462					0.10445761444998425
IYVDHDDGGD	10	Unmodified	_IYVDHDDGGD_					0	0	0			REV__nc|ENSG00000196104|Q9BQ16-7|SPOCK3	REV__nc|ENSG00000196104|Q9BQ16-7|SPOCK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.2260131835938	2	553.225268	1104.43598	0.74256	0.0004108	-0.81184	-0.00044913	-0.069282	-3.8329E-05	553.2246578864133	30.532	0.44304	30.52	30.333	30.776	-0.012024					22	11	3	0	0	0	0.86718	1	1607	1607		27.882	1.1893	1	58975	+		19417	23091	13101	13111	22463	22463					-0.11205799317690435
IYVGAKVFLI	10	Unmodified	_IYVGAKVFLI_					0	0	0		ENST00000466134.5_1_21:45719988-45734072:+|nuORF;ENSG00000141959|ENST00000349048|PFKL;nc|ENSG00000141959|P17858-2|PFKL;ENST00000397961.6_1_21:45725201-45746742:+|nuORF	ENST00000466134.5_1_21:45719988-45734072:+|nuORF	ENST00000466134.5_1_21:45719988-45734072:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.8515014648438	2	561.84971	1121.68487	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.932	1	77.932	77.432	78.432	0								0	0	0	0.45132	1	7120	7120		23.042	3.0457	1				19418	4534	13102	13112	22464	22464					0.1288924044763462
IYVGSGLVIV	10	Unmodified	_IYVGSGLVIV_					0	0	0			REV__nc|ENSG00000174938|Q6UXD5-6|SEZ6L2	REV__nc|ENSG00000174938|Q6UXD5-6|SEZ6L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.311767578125	2	510.310418	1018.60628	0.59216	0.00030218	-0.9097	-0.00046423	-0.31755	-0.00016205	510.3097121801442	72.549	1.1113	73.103	72.528	73.639	0.55386					61	26	3	0	0	0	0.53935	1	8159	8159		53.351	2.016	1	473190	+		19419	22027	13103	13113	22465	22465					0.09772388142528143
IYVIQAPKGG	10	Unmodified	_IYVIQAPKGG_					0	0	0		ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3043212890625	2	523.305667	1044.59678	-0.61952	-0.0003242	-3.0338	-0.0015876	-3.6533	-0.0019118	523.3039684590141	101.43	1.531	101.43	100.64	102.17	0					81	36	3	0	0	0	0.86589	1	10343	10343		29.15	0	1	761010			19420	6887	13104	13114	22466	22466					0.0762661985700106
IYVPILSHKVP	11	Unmodified	_IYVPILSHKVP_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5923156738281	3	422.592058	1264.75434	-0.81678	-0.00034517	2.1529	0.00090979	1.3361	0.00056462	422.59284282323074	58.274	1.5988	58.267	57.538	59.137	-0.0074387					138	72	3	0	0	0	0.732	2	4946	4906;4946		26.063	0.81632	1	237230	+		19421	21174	13105	13115	22467;22468	22468					0.13255699396358978
IYYLIFLYLLL	11	Unmodified	_IYYLIFLYLLL_					0	0	0			REV__ENST00000523744.2_2_8:17924585-17924894:-|nuORF	REV__ENST00000523744.2_2_8:17924585-17924894:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	482.9602355957031	3	482.959747	1445.85741	-2.01	-0.00097073	2.3893	0.0011539	0.37935	0.00018321	482.9607228885635	19.199	0.45232	19.199	18.987	19.439	0					36	14	3	0	0	0	0.78085	1	382	382		15.333	4.3349	1	100610	+		19422	28146	13106	13116	22469	22469					0.1523176706432423
IYYVNLKIY	9	Unmodified	_IYYVNLKIY_					0	0	0		ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENST00000460978.1_1_3:41979458-41996251:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	594.8375244140625	2	594.8368	1187.65905	-0.22069	-0.00013127	2.3401	0.001392	2.1194	0.0012607	594.8381332628321	69.679	0.59947	69.642	69.378	69.978	-0.036957					55	31	2	0	0	0	0.7932	1	6741	6741		25.45	1.2474	1	1810100			19423	12018	13107	13117	22470	22470					0.07272346205309077
KAAALASLKK	10	Unmodified	_KAAALASLKK_					0	0	0		ENST00000477888.1_1_9:94842274-94843223:-|nuORF;nc|ENSG00000090054|O15269-2|SPTLC1;ENSG00000090054|ENST00000262554|SPTLC1	ENST00000477888.1_1_9:94842274-94843223:-|nuORF	ENST00000477888.1_1_9:94842274-94843223:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.8291015625	2	500.829309	999.644065	-0.046363	-2.322E-05	0.10109	5.0628E-05	0.054727	2.7409E-05	500.8293620731646	15.806	0.27365	15.317	15.16	15.434	-0.48917					13	7	3	0	0	0	0.44803	1	45	45		60.118	4.6141	1	219020			19424	1637	13108	13118	22471	22471					0.1442289912798742
KAAESRIK	8	Unmodified	_KAAESRIK_					0	0	0		nc|ENSG00000141577|Q9UPN4-3|CEP131;ENSG00000141577|ENST00000450824|CEP131;nc|ENSG00000141577|Q9UPN4|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.7742004394531	2	451.774534	901.534515	-0.024801	-1.1204E-05	0.042474	1.9189E-05	0.017673	7.9842E-06	451.7744086375653	22.061	0.90779	21.617	20.992	21.9	-0.44324					29	20	2	0	0	0	0.48059	1	859	859		76.774	13.468	1	117650			19425	4515	13109	13119	22472	22472					0.07980893508658937
KAAESRIK	8	Unmodified	_KAAESRIK_					0	0	0		nc|ENSG00000141577|Q9UPN4-3|CEP131;ENSG00000141577|ENST00000450824|CEP131;nc|ENSG00000141577|Q9UPN4|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	451.774534	901.534515	0.062197	2.8099E-05	0.2221	0.00010034	0.2843	0.00012844	451.77452433451214	22.178	0.79367	21.567	21.117	21.91	-0.6107	-0.025237	6.5022E-05	NaN	76.774	40	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144540			19426	4515	13109	13119							0.07980893508658937
KAAKKKVP	8	Unmodified	_KAAKKKVP_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2998962402344	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.83058	1	6944	6944		12.959	3.4886	1	1702600	+		19427	22956	13110	13120	22473	22473					0.14627262273359065
KAAKKKVP	8	Unmodified	_KAAKKKVP_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3001403808594	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.82419	1	6842	6842		13.775	1.5685	1	1921500	+		19428	22956	13110	13120	22474	22474					0.14627262273359065
KAAKKVKG	8	Unmodified	_KAAKKVKG_					0	0	0			REV__nc|ENSG00000178804|Q8IZA3-2|H1-8	REV__nc|ENSG00000178804|Q8IZA3-2|H1-8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.2845153808594	2	415.284537	828.554522	2.201	0.00091406	-1.7222	-0.00071522	0.4788	0.00019884	415.28367513035636	24.933	1.0561	24.419	24.012	25.068	-0.51365					60	23	4	0	0	0	0.884	1	1250	1250		33.516	6.7195	1	1062000	+		19429	22295	13111	13121	22475	22475					0.1333868923927639
KAAKRPRVGTP	11	Unmodified	_KAAKRPRVGTP_					0	0	0		ENST00000589104.5_1_19:5070919-5151519:+|nuORF;nc|ENSG00000127663|O94953|KDM4B;ENSG00000127663|ENST00000159111|KDM4B	ENST00000589104.5_1_19:5070919-5151519:+|nuORF	ENST00000589104.5_1_19:5070919-5151519:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8680419921875	2	590.867289	1179.72002	-0.23931	-0.0001414	-0.95289	-0.00056303	-1.1922	-0.00070443	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.73893	1	10602	10602		24.519	1.4767	1	39787000			19430	3512	13112	13122	22476	22476					0.13735296028130506
KAALDLPP	8	Unmodified	_KAALDLPP_					0	0	0		ENST00000319694.2_1_7:29603568-29603868:+|nuORF	ENST00000319694.2_1_7:29603568-29603868:+|nuORF	ENST00000319694.2_1_7:29603568-29603868:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.74627685546875	2	412.747453	823.480354	0.59258	0.00024459	-3.1125	-0.0012847	-2.5199	-0.0010401	412.7459816855853	84.982	2.6893	85.131	84.474	87.163	0.14857					120	62	4	0	0	0	0.90465	1	8278	8278		40.573	5.3719	1	1216600			19431	10019	13113	13123	22477	22477					0.06155301357091503
KAALVQRAKTQ	11	Unmodified	_KAALVQRAKTQ_					0	0	0		ENSG00000162302|ENST00000334205|RPS6KA4;nc|ENSG00000162302|O75676-2|RPS6KA4	ENSG00000162302|ENST00000334205|RPS6KA4	ENSG00000162302|ENST00000334205|RPS6KA4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	607.439453125	2	607.372404	1212.73025	1.8567	0.0011277	0.50834	0.00030875	2.365	0.0014365	607.373253369667	95.065	0.15778	95.497	95.4	95.558	0.4324					5	3	2	0	0	0	0.17472	1	11370	11370		24.519	14.254	1	43214			19432	5677	13114	13124	22478	22478					0.13239858962697326
KAAPSPRPALR	11	Unmodified	_KAAPSPRPALR_					0	0	0		ENST00000488267.5_1_4:1695409-1696553:-|nuORF	ENST00000488267.5_1_4:1695409-1696553:-|nuORF	ENST00000488267.5_1_4:1695409-1696553:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3549194335938	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.74763	1	12606	12606		22.58	0.61977	1	3937500			19433	12620	13115	13125	22479	22479					0.1186360713677459
KACGGRRGTL	10	Unmodified	_KACGGRRGTL_					0	0	0			REV__ENSG00000163114|ENST00000295266|PDHA2	REV__ENSG00000163114|ENST00000295266|PDHA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.78515625	2	509.782367	1017.55018	2.0303	0.001035	3.3046	0.0016846	5.3348	0.0027196	509.783792223419	106.11	0.72634	106.24	105.98	106.71	0.12742					70	32	3	0	0	0	0.73395	1	12976	12976		42.864	0.46813	1	602380	+		19434	20884	13116	13126	22480	22480					0.04210856754059478
KACLLAAAI	9	Unmodified	_KACLLAAAI_					0	0	0		ENST00000542432.5_1_12:21654105-21654499:-|nuORF	ENST00000542432.5_1_12:21654105-21654499:-|nuORF	ENST00000542432.5_1_12:21654105-21654499:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2655944824219	2	437.264956	872.515359	1.7622	0.00077054	0.050084	2.19E-05	1.8123	0.00079244	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.74905	1	953	953		37.028	10.232	1	1079000			19435	13529	13117	13127	22481	22481					0.07400220893384812
KADLIRPKRK	10	Unmodified	_KADLIRPKRK_					0	0	0		nc|ENSG00000120616|Q9H2F5-3|EPC1;ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1;ENST00000495790.1_1_10:32575832-32580264:-|nuORF	nc|ENSG00000120616|Q9H2F5-3|EPC1	nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.9384460449219	3	408.934818	1223.78262	-0.40513	-0.00016567	-1.2775	-0.0005224	-1.6826	-0.00068807	408.93419492765196	16.398	0.31886	16.318	16.169	16.488	-0.080017					13	11	2	0	0	0	0.86551	1	125	125		14.694	1.7362	1	27997			19436	3138	13118	13128	22482	22482					0.17968442096275794
KADLKADESS	10	Unmodified	_KADLKADESS_					0	0	0			REV__ENSG00000102543|ENST00000251108|CDADC1	REV__ENSG00000102543|ENST00000251108|CDADC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.8008422851562	2	532.266936	1062.51932	1.1639	0.00061953	-0.76447	-0.0004069	0.39947	0.00021263	532.7664818170531	34.771	0.77894	35.152	34.893	35.672	0.3812					43	19	4	0	0	0	0.37624	1	2602	2602		36.447	0.82846	1	543350	+		19437	17345	13119	13129	22483	22483					-0.009440628698484943
KADNKLIR	8	Unmodified	_KADNKLIR_					0	0	0			REV__chr4:98891332-98893166|25|22.28|0.36|5.96|-|2|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|26	REV__chr4:98891332-98893166|25|22.28|0.36|5.96|-|2|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2959899902344	2	479.295633	956.576714	-0.50734	-0.00024316	0.34572	0.0001657	-0.16162	-7.7463E-05	479.2956593475875	17.406	0.40918	16.795	16.52	16.929	-0.6107					18	8	3	0	0	0	0.90089	1	271	271		39.253	2.8061	1	98503	+		19438	15846	13120	13130	22484	22484					0.0966886891702643
KAEDNLKKT	9	Unmodified	_KAEDNLKKT_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.791015625	2	523.795663	1045.57677	-0.29272	-0.00015332	-3.017	-0.0015803	-3.3097	-0.0017336	523.7938789083427	18.875	0.79418	18.919	18.774	19.569	0.043749					84	37	3	0	0	0	0.7932	1	364	364		25.574	1.3713	1	396290			19439	8027	13121	13131	22485	22485					0.05580824126354855
KAEEEVSSPY	10	Unmodified	_KAEEEVSSPY_					0	0	0			REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.7665405273438	2	569.766768	1137.51898	0.51177	0.00029159	-1.0326	-0.00058832	-0.5208	-0.00029674	569.7660224758696	60.966	0.45724	61.085	60.834	61.291	0.11901					44	20	3	0	0	0	0.86106	1	5314	5314		33.922	0	1	681140	+		19440	20292	13122	13132	22486	22486					-0.04427482589699139
KAEEYEKM	8	Oxidation (M)	_KAEEYEKM(Oxidation (M))_		KAEEYEKM(1)		KAEEYEKM(61)	0	0	1		ENSG00000101654|ENST00000383314|RNMT;nc|ENSG00000101654|O43148-2|RNMT	ENSG00000101654|ENST00000383314|RNMT	ENSG00000101654|ENST00000383314|RNMT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	522.2360229492188	2	522.239332	1042.46411	0.092336	4.8221E-05	-0.17453	-9.1149E-05	-0.082199	-4.2928E-05	522.239038988769	50.055	0.85317	50.052	49.756	50.609	-0.0030327					47	20	3	0	0	0	0.83456	1	4249	4249		60.972	9.6365	1	644230			19441	1954	13123	13133	22487	22487		40			-0.05542192661982881
KAEGLEKKQI	10	Unmodified	_KAEGLEKKQI_					0	0	0		ENSG00000154415|ENST00000284601|PPP1R3A	ENSG00000154415|ENST00000284601|PPP1R3A	ENSG00000154415|ENST00000284601|PPP1R3A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	572.3391723632812	2	572.340238	1142.66592	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.941	1	34.886	34.386	35.386	-0.055149								0	0	0	0.45132	1	1797	1797		30.318	3.2704	1				19442	5276	13124	13134	22488	22488					0.10029659085898857
KAEKKKNKKK	10	Unmodified	_KAEKKKNKKK_					0	0	0		nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1;ENSG00000126777|ENST00000395314|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.4044189453125	2	615.406247	1228.79794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.806	1	70.882	70.382	71.382	0.076225								0	0	0	0.45132	1	6409	6409		14.137	2.6261	1				19443	3468	13125	13135	22489	22489					0.19269308893490233
KAEPRPRS	8	Unmodified	_KAEPRPRS_					0	0	0		ENSG00000126562|ENST00000246914|WNK4;nc|ENSG00000126562|Q96J92-3|WNK4	ENSG00000126562|ENST00000246914|WNK4	ENSG00000126562|ENST00000246914|WNK4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.7557678222656	2	470.769783	939.525013	-0.94642	-0.00044555	-0.93227	-0.00043889	-1.8787	-0.00088443	470.76928369417885	47.157	0.59137	47.628	47.344	47.935	0.47139					25	13	2	0	0	0	0.4196	1	4512	4512		35.618	0	1	3362100			19444	3457	13126	13136	22490	22490					0.052831252231385406
KAEREEEPVTQ	11	Unmodified	_KAEREEEPVTQ_					0	0	0			REV__nc|ENSG00000198862|O94822-3|LTN1	REV__nc|ENSG00000198862|O94822-3|LTN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.8421630859375	3	439.221129	1314.64156	-0.50035	-0.00021977	-1.4757	-0.00064817	-1.9761	-0.00086794	439.220338673842	26.716	1.1211	26.54	26.16	27.281	-0.17559					35	24	2	0	0	0	0.1746	1	1476	1476		18.966	6.0088	1	69580	+		19445	23401	13127	13137	22491	22491					-0.0031764585830842407
KAERLFKKK	9	Unmodified	_KAERLFKKK_					0	0	0		ENST00000581182.1_1_17:57247113-57262574:+|nuORF;ENSG00000068489|ENST00000262293|PRR11	ENST00000581182.1_1_17:57247113-57262574:+|nuORF	ENST00000581182.1_1_17:57247113-57262574:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3692626953125	2	574.369133	1146.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.649	1	15.625	15.125	16.125	-0.024207								0	0	0	0.32022	1	59	59		23.523	2.5758	1				19446	1200	13128	13138	22492	22492					0.15621965801983606
KAFALVVIGGF	11	Unmodified	_KAFALVVIGGF_					0	0	0			REV__nc|ENSG00000141458|O15118-2|NPC1	REV__nc|ENSG00000141458|O15118-2|NPC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3408813476562	2	561.33951	1120.66447	3.1141	0.0017481	2.4012	0.0013479	5.5153	0.003096	561.3419985996113	118.36	0.10838	118.34	118.28	118.38	-0.024208					5	3	2	0	0	0	0.18011	1	13106	13106		16.473	0	1	13565	+		19447	19688	13129	13139	22493	22493					0.10896069787804663
KAFLRRGFLG	10	Unmodified	_KAFLRRGFLG_					0	0	0			REV__ENST00000605945.1_1_6:28048508-28048712:-|nuORF	REV__ENST00000605945.1_1_6:28048508-28048712:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.854736328125	2	582.85365	1163.69275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.23	1	118.26	117.76	118.76	0.026466								0	0	0	0.45132	1	13006	13006		16.473	3.0191	1		+		19448	29365	13130	13140	22494	22494					0.11744812487722811
KAFRSAPHLRI	11	Unmodified	_KAFRSAPHLRI_					0	0	0		ENST00000343949.9_1_19:12089953-12090844:+|nuORF	ENST00000343949.9_1_19:12089953-12090844:+|nuORF	ENST00000343949.9_1_19:12089953-12090844:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5976867675781	3	432.594684	1294.76222	2.4047	0.0010403	4.4135	0.0019093	6.8182	0.0029495	432.5965673542701	106.31	1.2824	106.34	105.87	107.15	0.03688					86	29	5	0	0	0	0.74405	1	11651	11651		23.378	3.3474	1	16046000			19449	10286	13131	13141	22495	22495					0.12663271436508694
KAFTQKSTLKM	11	Unmodified	_KAFTQKSTLKM_					0	0	0		nc|ENSG00000196967|Q6P3V2-2|ZNF585A;ENSG00000196967|ENST00000292841|ZNF585A	nc|ENSG00000196967|Q6P3V2-2|ZNF585A	nc|ENSG00000196967|Q6P3V2-2|ZNF585A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.3616333007812	2	641.863023	1281.71149	-1.1529	-0.00074	-3.0219	-0.0019397	-4.1748	-0.0026797	642.363236479055	112.35	1.0246	112.31	111.89	112.91	-0.032333					49	30	2	0	0	0	0.60058	1	12030	12030		44.377	0	1	21219000			19450	8119	13132	13142	22496	22496					0.08190561276614972
KAFYVPAQY	9	Unmodified	_KAFYVPAQY_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.7825317382812	2	543.784567	1085.55458	-0.9073	-0.00049338	-3.8929	-0.0021169	-4.8002	-0.0026103	543.7821288685951	32.032	0.89849	32.158	31.604	32.503	0.12643					50	20	3	0	0	0	0.67345	1	2204	2204		42.396	3.1433	1	344460			19451	6071	13133	13143	22497	22497					0.01522644448596111
KAGARRPS	8	Unmodified	_KAGARRPS_					0	0	0		nc|ENSG00000173805|P54257-3|HAP1;nc|ENSG00000173805|P54257-4|HAP1;ENSG00000173805|ENST00000347901|HAP1;nc|ENSG00000173805|P54257|HAP1	nc|ENSG00000173805|P54257-3|HAP1	nc|ENSG00000173805|P54257-3|HAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75128173828125	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.81897	1	7594	7594		20.947	1.587	1	532850			19452	15105	13134	13144	22498	22498					0.061148733972345326
KAGHLCHAYS	10	Unmodified	_KAGHLCHAYS_					0	0	0		nc|ENSG00000182606|Q9UPV9-3|TRAK1	nc|ENSG00000182606|Q9UPV9-3|TRAK1	nc|ENSG00000182606|Q9UPV9-3|TRAK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.8318481445312	2	543.761101	1085.50765	-0.18324	-9.9641E-05	3.099	0.0016851	2.9157	0.0015855	543.7625614202627	25.422	0.48221	25.111	24.765	25.247	-0.31125					17	10	2	0	0	0	0.37624	1	1262	1262		9.7057	0	1	88048			19453	15141	13135	13145	22499	22499					-0.03168538374188756
KAGKHTKA	8	Unmodified	_KAGKHTKA_					0	0	0		ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.7547912597656	2	420.756144	839.497735	-1.8952	-0.0007974	-0.59321	-0.0002496	-2.4884	-0.001047	420.75579416819653	20.848	1.2575	20.894	19.905	21.163	0.045401					83	61	2	0	0	0	0.79929	1	526	526		18.324	2.6882	1	128270			19454	7607	13136	13146	22500	22500					0.07156641682752252
KAGKKHSN	8	Unmodified	_KAGKKHSN_					0	0	0			REV__nc|ENSG00000204256|P25440-4|BRD2	REV__nc|ENSG00000204256|P25440-4|BRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2532653808594	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.86677	1	8348	8348		27.882	0	1	3370400	+		19455	23473	13137	13147	22501	22501					0.04839453677379879
KAGKKHSN	8	Unmodified	_KAGKKHSN_					0	0	0			REV__nc|ENSG00000204256|P25440-4|BRD2	REV__nc|ENSG00000204256|P25440-4|BRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2518615722656	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.86677	1	7084	7084		27.882	3.3631	1	712390	+		19456	23473	13137	13147	22502	22502					0.04839453677379879
KAGKKHSN	8	Unmodified	_KAGKKHSN_					0	0	0			REV__nc|ENSG00000204256|P25440-4|BRD2	REV__nc|ENSG00000204256|P25440-4|BRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2507629394531	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.86677	1	7165	7165		27.882	1.0861	1	2494100	+		19457	23473	13137	13147	22503	22503					0.04839453677379879
KAGKKLPK	8	Unmodified	_KAGKKLPK_					0	0	0			REV__nc|ENSG00000149554|O14757-2|CHEK1	REV__nc|ENSG00000149554|O14757-2|CHEK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3002624511719	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.83058	1	7155	7155		12.959	0	1	1702600	+		19458	15489	13138	13148	22504	22504					0.14627262273370434
KAGQVIPTLLR	11	Unmodified	_KAGQVIPTLLR_					0	0	0		nc|ENSG00000244617|Q53RT3|ASPRV1	nc|ENSG00000244617|Q53RT3|ASPRV1	nc|ENSG00000244617|Q53RT3|ASPRV1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	598.381103515625	2	598.379697	1194.74484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.487	1	21.533	21.033	22.033	0.045401								0	0	0	0.56276	1	588	588		25.574	1.0549	1				19459	15283	13139	13149	22505	22505					0.15525931110823876
KAGVCPPK	8	Unmodified	_KAGVCPPK_					0	0	0		ENSG00000124107|ENST00000338380|SLPI	ENSG00000124107|ENST00000338380|SLPI	ENSG00000124107|ENST00000338380|SLPI	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	400.228515625	2	400.228374	798.442194	-1.6649	-0.00066634	2.6208	0.0010489	0.95586	0.00038256	400.2294311369864	54.916	1.7424	54.916	53.961	55.703	0					80	56	2	0	0	0	0.79929	1	4644	4644		18.324	3.6603	1	296370			19460	3304	13140	13150	22506	22506					0.03491092170770571
KAGYIFLQE	9	Unmodified	_KAGYIFLQE_					0	0	0		ENSG00000158683|ENST00000289672|PKD1L1;nc|ENSG00000158683|Q8TDX9-2|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.7879638671875	2	534.78985	1067.56515	0.41384	0.00022131	-4.1296	-0.0022085	-3.7158	-0.0019872	534.7875118397072	29.033	1.0827	28.859	28.365	29.448	-0.17336					49	25	4	0	0	0	0.21969	1	1803	1803		71.877	1.0613	1	542710			19461	5492	13141	13151	22507	22507					0.03406627103026949
KAHDIKKLLK	10	Unmodified	_KAHDIKKLLK_					0	0	0			REV__nc|ENSG00000143603|Q9UGI6-3|KCNN3	REV__nc|ENSG00000143603|Q9UGI6-3|KCNN3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3912963867188	2	597.390065	1192.76558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.14	1	117.08	116.58	117.58	-0.064972								0	0	0	0.45132	1	14013	14013		10.265	1.0823	1		+		19462	19825	13142	13152	22508	22508					0.17690521490499123
KAHLYQIRKRE	11	Unmodified	_KAHLYQIRKRE_					0	0	0			REV__ENSG00000164935|ENST00000297581|DCSTAMP	REV__ENSG00000164935|ENST00000297581|DCSTAMP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.2825927734375	3	481.284398	1440.83137	-0.81885	-0.0003941	-0.98931	-0.00047614	-1.8082	-0.00087024	481.2839595795984	103	2.1104	103	102.28	104.39	0					111	52	3	0	0	0	0.76251	1	10608	10608		19.263	2.7328	1	1092200	+		19463	21132	13143	13153	22509	22509					0.12858310665365025
KAILGLVYV	9	Unmodified	_KAILGLVYV_					0	0	0			REV__ENSG00000164327|ENST00000357387|RICTOR	REV__ENSG00000164327|ENST00000357387|RICTOR	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	488.3139953613281	2	488.315503	974.616454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.664	1	15.664	15.164	16.164	0								0	0	0	0.33676	1	54	54		18.324	1.6194	1		+		19464	21070	13144	13154	22510	22510					0.12812995867750487
KAINHRLDRQ	10	Unmodified	_KAINHRLDRQ_					0	0	0			REV__ENSG00000139629|ENST00000356317|GALNT6	REV__ENSG00000139629|ENST00000356317|GALNT6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.365966796875	2	625.857452	1249.70035	0.76696	0.00048001	2.4596	0.0015394	3.2266	0.0020194	625.8590492635708	21.812	0.36678	21.184	20.982	21.349	-0.62834					15	8	2	0	0	0	0.8651	1	838	838		25.574	1.0549	1	84240	+		19465	19556	13145	13155	22511	22511					0.08548920017346973
KAINHRLDRQ	10	Unmodified	_KAINHRLDRQ_					0	0	0			REV__ENSG00000139629|ENST00000356317|GALNT6	REV__ENSG00000139629|ENST00000356317|GALNT6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	625.857452	1249.70035	1.0123	0.00063358	2.1273	0.0013314	3.1396	0.001965	625.8587138245767	21.558	0.41026	21.115	20.961	21.371	-0.44324	-0.03433	-0.00010851	NaN	25.574	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56964	+		19466	19556	13145	13155							0.08548920017346973
KAINHRLDRQ	10	Unmodified	_KAINHRLDRQ_					0	0	0			REV__ENSG00000139629|ENST00000356317|GALNT6	REV__ENSG00000139629|ENST00000356317|GALNT6	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	625.857452	1249.70035	0.76696	0.00048001	2.4596	0.0015394	3.2266	0.0020194	625.8590492635708	21.812	0.36678	21.184	20.982	21.349	-0.62834	0.03433	0.00030745	NaN	25.574	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84240	+		19467	19556	13145	13155							0.08548920017346973
KAKEDFLVYKL	11	Unmodified	_KAKEDFLVYKL_					0	0	0		ENSG00000173905|ENST00000470487|GOLIM4	ENSG00000173905|ENST00000470487|GOLIM4	ENSG00000173905|ENST00000470487|GOLIM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9331359863281	3	451.930739	1352.77039	0.75363	0.00034059	3.5405	0.0016001	4.2942	0.0019407	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.73621	1	10477	10477		25.126	0.058206	1	952120			19468	6897	13146	13156	22512	22512					0.1081136084260379
KAKEPKKAK	9	Unmodified	_KAKEPKKAK_					0	0	0		ENSG00000124177|ENST00000373233|CHD6;nc|ENSG00000124177|Q8TD26-2|CHD6;nc|ENSG00000124177|Q8TD26-3|CHD6	ENSG00000124177|ENST00000373233|CHD6	ENSG00000124177|ENST00000373233|CHD6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.3358764648438	2	514.334759	1026.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.482	1	17.86	17.36	18.36	-0.62141								0	0	0	0.29796	1	397	397		31.53	1.2121	1				19469	3311	13147	13157	22513	22513					0.14270301502256189
KAKEPPFVRK	10	Unmodified	_KAKEPPFVRK_					0	0	0		ENSG00000130749|ENST00000253048|ZC3H4	ENSG00000130749|ENST00000253048|ZC3H4	ENSG00000130749|ENST00000253048|ZC3H4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.580078125	3	400.580152	1198.71863	2.0292	0.00081285	-1.4771	-0.00059172	0.55203	0.00022113	400.57946225825975	20.455	0.9392	19.996	19.641	20.58	-0.4591					46	21	3	0	0	0	0.5442	1	649	649		53.089	13.216	1	275000			19470	3676	13148	13158	22514	22514					0.1272166193934936
KAKEPPFVRK	10	Unmodified	_KAKEPPFVRK_					0	0	0		ENSG00000130749|ENST00000253048|ZC3H4	ENSG00000130749|ENST00000253048|ZC3H4	ENSG00000130749|ENST00000253048|ZC3H4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.58038330078125	3	400.580152	1198.71863	-0.13625	-5.4579E-05	0.80761	0.00032351	0.67136	0.00026894	400.5803754100224	20.669	0.84843	20.039	19.673	20.521	-0.6296					51	20	4	0	0	0	0.5442	1	675	675		53.089	5.8613	1	284940			19471	3676	13148	13158	22515	22515					0.1272166193934936
KAKGARVRA	9	Unmodified	_KAKGARVRA_					0	0	0			REV__ENST00000512427.5_1_12:54392814-54392907:-|nuORF	REV__ENST00000512427.5_1_12:54392814-54392907:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.80438232421875	2	478.809242	955.603932	-2.669	-0.0012779	-4.0656	-0.0019466	-6.7346	-0.0032246	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.7932	1	2916	2916		15.642	0.97771	1	370420	+		19472	27979	13149	13159	22516	22516					0.12435397248077606
KAKGLKPM	8	Unmodified	_KAKGLKPM_					0	0	0		ENST00000549913.6_1_12:113307544-113334582:+|nuORF;nc|ENSG00000089169|Q9Y2J0-2|RPH3A;chr12:112828389-112847696|15|13.47|0.21|5.99|+|ENST00000551052|RPH3A,RPH3A;ENSG00000089169|ENST00000389385|RPH3A;ENST00000609727.1_1_17:13505-22393:-|nuORF;ENSG00000272636|ENST00000613549|DOC2B	ENST00000549913.6_1_12:113307544-113334582:+|nuORF;ENSG00000272636|ENST00000613549|DOC2B	ENST00000549913.6_1_12:113307544-113334582:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7740478515625	2	436.772948	871.531344	0.068775	3.0039E-05	1.8603	0.00081255	1.9291	0.00084258	436.77361932227035	26.594	0.6912	26.703	26.441	27.132	0.10901					65	32	3	0	0	0	0.80706	1	1013	1013		19.36	1.0356	1	226120			19473	112;8984	13150	13160	22517	22517					0.0904392713028983
KAKGVTTK	8	Unmodified	_KAKGVTTK_					0	0	0			REV__nc|ENSG00000137942|Q5T0N5-3|FNBP1L	REV__nc|ENSG00000137942|Q5T0N5-3|FNBP1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.25701904296875	2	416.766178	831.517802	1.6244	0.000677	-1.2334	-0.00051404	0.39102	0.00016297	416.7655899210381	23.774	1.699	23.199	22.92	24.619	-0.57415					62	38	2	0	0	0	0.4196	1	1062	1062		11.511	7.8267	1	94430	+		19474	19424	13151	13161	22518	22518					0.09530392622696127
KAKHGLFV	8	Unmodified	_KAKHGLFV_					0	0	0		nc|ENSG00000100350|Q8IWF2-2|FOXRED2;ENSG00000100350|ENST00000397224|FOXRED2;ENST00000366463.6_1_22:36886057-36894231:-|nuORF	nc|ENSG00000100350|Q8IWF2-2|FOXRED2;ENST00000366463.6_1_22:36886057-36894231:-|nuORF	ENST00000366463.6_1_22:36886057-36894231:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2745361328125	2	450.276712	898.538872	-1.7763	-0.00079984	-3.3706	-0.0015177	-5.147	-0.0023176	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.86791	1	9574	9574		28.254	1.4582	1	35178000			19475	1832;10506	13152	13162	22519	22519					0.08554402722222676
KAKIAFGQS	9	Unmodified	_KAKIAFGQS_					0	0	0		ENSG00000169967|ENST00000682094|MAP3K2	ENSG00000169967|ENST00000682094|MAP3K2	ENSG00000169967|ENST00000682094|MAP3K2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.2744445800781	2	475.276909	948.539266	1.0333	0.00049109	-0.71761	-0.00034107	0.31566	0.00015003	475.27644256168264	22.305	0.57499	21.886	21.61	22.185	-0.41879					20	12	2	0	0	0	0.69624	1	895	895		40.778	1.5253	1	66464			19476	6547	13153	13163	22520	22520					0.06293777651433174
KAKIENVLIDS	11	Unmodified	_KAKIENVLIDS_					0	0	0			REV__nc|ENSG00000101977|P10911-6|MCF2	REV__nc|ENSG00000101977|P10911-6|MCF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.3574829101562	2	615.358628	1228.7027	-0.35839	-0.00022054	-1.6201	-0.00099692	-1.9785	-0.0012175	615.3576084899992	104.75	2.3818	104.73	104.28	106.66	-0.014809					147	56	4	0	0	0	0.732	1	11286	11286		26.063	1.5442	1	1933000	+		19477	17315	13154	13164	22521	22521					0.09749910911796178
KAKILLKKFPH	11	Unmodified	_KAKILLKKFPH_					0	0	0		nc|ENSG00000136522|Q9HD33-3|MRPL47;nc|ENSG00000136522|Q9HD33-2|MRPL47;ENSG00000136522|ENST00000476781|MRPL47	nc|ENSG00000136522|Q9HD33-3|MRPL47	nc|ENSG00000136522|Q9HD33-3|MRPL47	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.6263122558594	3	441.627214	1321.85981	-1.546	-0.00068278	-1.3074	-0.00057739	-2.8535	-0.0012602	441.62661352683085	15.145	0.31651	15.194	15.059	15.375	0.049079					26	12	3	0	0	0	0.71207	1	9	9		29.551	7.7703	1	145410			19478	4116	13155	13165	22522	22522					0.21175660312633227
KAKKKKKT	8	Unmodified	_KAKKKKKT_					0	0	0			REV__ENSG00000157895|ENST00000288757|C12orf43	REV__ENSG00000157895|ENST00000288757|C12orf43	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.7576599121094	2	480.339844	958.665135	-0.75752	-0.00036387	2.2833	0.0010967	1.5258	0.00073288	480.34067290534955	76.063	0.29306	76.632	76.474	76.768	0.56836					11	6	2	0	0	0	0.4196	1	8633	8633		1.2052	0	1	178600	+		19479	20571	13156	13166	22523	22523					0.18414909227499265
KAKKSSAS	8	Unmodified	_KAKKSSAS_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.23199462890625	2	403.74016	805.465767	0.8525	0.00034419	-2.04	-0.00082364	-1.1875	-0.00047946	403.7393736093782	85.947	0.94377	85.873	85.495	86.438	-0.073769					34	21	2	0	0	0	0.4196	1	8803	8803		16.473	4.9621	1	93763	+		19480	20445	13157	13167	22524	22524					0.055252292089562616
KAKLIESVLY	10	Unmodified	_KAKLIESVLY_					0	0	0			REV__ENSG00000115816|ENST00000234170|CEBPZ	REV__ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3541870117188	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.85694	1	12800	12800		21.96	3.6355	1	3937500	+		19481	18152	13158	13168	22525	22525					0.12132017751082458
KAKLIMTM	8	Unmodified	_KAKLIMTM_					0	0	0			REV__ENSG00000177189|ENST00000379565|RPS6KA3	REV__ENSG00000177189|ENST00000379565|RPS6KA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.2747802734375	2	468.274467	934.53438	-0.18913	-8.8564E-05	0.35007	0.00016393	0.16094	7.5365E-05	468.27448593009586	17.515	0.58294	16.904	16.613	17.196	-0.6107					33	13	3	0	0	0	0.89043	1	273	273		35.618	3.6634	1	151560	+		19482	22187	13159	13169	22526	22526					0.06449434192791159
KAKLRDMLS	9	Unmodified	_KAKLRDMLS_					0	0	0		nc|ENSG00000127527|Q9UBC2-4|EPS15L1;nc|ENSG00000127527|Q9UBC2-3|EPS15L1;nc|ENSG00000127527|Q9UBC2|EPS15L1;ENSG00000127527|ENST00000455140|EPS15L1	nc|ENSG00000127527|Q9UBC2-4|EPS15L1	nc|ENSG00000127527|Q9UBC2-4|EPS15L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3087158203125	2	531.310426	1060.6063	-0.3677	-0.00019536	-3.0327	-0.0016113	-3.4004	-0.0018067	531.3086656054257	37.269	0.66434	37.215	36.961	37.625	-0.053558					34	14	3	0	0	0	0.76764	1	2564	2564		34.173	6.2903	1	150080			19483	3504	13160	13170	22527	22527					0.07842064870851573
KAKMTIGLR	9	Oxidation (M)	_KAKM(Oxidation (M))TIGLR_		KAKM(1)TIGLR		KAKM(60)TIGLR	0	0	1			REV__ENSG00000160818|ENST00000368232|GPATCH4	REV__ENSG00000160818|ENST00000368232|GPATCH4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.3113403320312	2	517.312969	1032.61138	0.18089	9.3577E-05	-3.5348	-0.0018286	-3.3539	-0.001735	517.3109659535953	18.502	0.70231	17.88	17.539	18.241	-0.62141					44	15	4	0	0	0	0.36616	1	395	395		60.118	6.7668	1	661720	+		19484	20744	13161	13171	22528	22528		308			0.09638368733499192
KAKMTIGLR	9	Oxidation (M)	_KAKM(Oxidation (M))TIGLR_					0	0	1			REV__ENSG00000160818|ENST00000368232|GPATCH4	REV__ENSG00000160818|ENST00000368232|GPATCH4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	517.312969	1032.61138	0.98861	0.00051142	-4.1822	-0.0021635	-3.1936	-0.0016521	517.3106407594323	18.343	0.55896	17.867	17.565	18.124	-0.47694	-0.0069723	-0.00036738	NaN	60.118	33	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	634700	+		19485	20744	13161	13171				308			0.09638368733499192
KAKMTIGLR	9	Oxidation (M)	_KAKM(Oxidation (M))TIGLR_					0	0	1			REV__ENSG00000160818|ENST00000368232|GPATCH4	REV__ENSG00000160818|ENST00000368232|GPATCH4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	517.312969	1032.61138	0.18089	9.3577E-05	-3.5348	-0.0018286	-3.3539	-0.001735	517.3109659535953	18.502	0.70231	17.88	17.539	18.241	-0.62141	0.0069723	0.00030246	NaN	60.118	44	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	661720	+		19486	20744	13161	13171				308			0.09638368733499192
KAKPKVNVKPS	11	Unmodified	_KAKPKVNVKPS_					0	0	0		ENSG00000058673|ENST00000367210|ZC3H11A	ENSG00000058673|ENST00000367210|ZC3H11A	ENSG00000058673|ENST00000367210|ZC3H11A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	598.8829956054688	2	598.379697	1194.74484	0.84734	0.00050703	2.4098	0.001442	3.2572	0.001949	598.3810873389388	40.888	1.2283	40.892	40.311	41.539	0.0043983					77	44	2	0	0	0	0.72106	1	2660	2660		28.081	3.5623	1	407900			19487	1046	13162	13172	22529	22529					0.15525931110846614
KAKRLLYC	8	Unmodified	_KAKRLLYC_					0	0	0		ENST00000495739.1_1_3:21478408-21552461:-|nuORF;ENST00000552382.5_1_12:54764042-54772879:-|nuORF;ENSG00000161642|ENST00000394313|ZNF385A;nc|ENSG00000161642|Q96PM9|ZNF385A;ENSG00000151789|ENST00000281523|ZNF385D	ENST00000495739.1_1_3:21478408-21552461:-|nuORF	ENST00000495739.1_1_3:21478408-21552461:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.7958679199219	2	497.796955	993.579357	-1.2593	-0.00062688	-0.71711	-0.00035698	-1.9764	-0.00098385	497.79616758279207	48.708	1.9058	48.709	47.99	49.896	0.00017166					121	43	4	0	0	0	0.82464	1	4108	4108		21.702	0	1	500820			19488	5142	13163	13173	22530	22530					0.08231001050330633
KAKRTSPQP	9	Unmodified	_KAKRTSPQP_					0	0	0			REV__nc|ENSG00000165458|O15357-2|INPPL1	REV__nc|ENSG00000165458|O15357-2|INPPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7999267578125	2	506.79854	1011.58253	0.2762	0.00013998	4.2956	0.002177	4.5718	0.002317	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.77696	1	3619	3619		31.53	4.7337	1	416790	+		19489	21184	13164	13174	22531	22531					0.0771996742871579
KAKVAVKPH	9	Unmodified	_KAKVAVKPH_					0	0	0			REV__ENSG00000118960|ENST00000304031|HS1BP3	REV__ENSG00000118960|ENST00000304031|HS1BP3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.7069396972656	2	489.316369	976.618185	0.18124	8.8685E-05	-4.1827	-0.0020466	-4.0014	-0.001958	489.314244865134	95.03	1.2485	95.45	95.061	96.31	0.41963					65	30	3	0	0	0	0.20789	1	11350	11350		30.504	5.0535	1	740120	+		19490	18333	13165	13175	22532	22532					0.12894049676367558
KAKVAVKPH	9	Unmodified	_KAKVAVKPH_					0	0	0			REV__ENSG00000118960|ENST00000304031|HS1BP3	REV__ENSG00000118960|ENST00000304031|HS1BP3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	489.316369	976.618185	-0.88348	-0.0004323	-3.6936	-0.0018073	-4.577	-0.0022396	489.3144755395274	95.555	1.1635	95.555	95.138	96.302	0	0.21154	0.00084794	NaN	30.504	44	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	348190	+		19491	18333	13165	13175							0.12894049676367558
KAKVAVKPH	9	Unmodified	_KAKVAVKPH_					0	0	0			REV__ENSG00000118960|ENST00000304031|HS1BP3	REV__ENSG00000118960|ENST00000304031|HS1BP3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	489.316369	976.618185	-1.6498	-0.00080726	-3.082	-0.0015081	-4.7317	-0.0023153	489.3147299207674	95.17	1.9292	95.372	94.862	96.791	0.20242	0.029204	0.0014464	NaN	30.504	112	45	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1907500	+		19492	18333	13165	13175							0.12894049676367558
KAKVGQLQLSH	11	Unmodified	_KAKVGQLQLSH_					0	0	0		nc|ENSG00000149131|P05155-2|SERPING1;ENSG00000149131|ENST00000278407|SERPING1;nc|ENSG00000149131|P05155-3|SERPING1	nc|ENSG00000149131|P05155-2|SERPING1	nc|ENSG00000149131|P05155-2|SERPING1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.57464599609375	3	403.575178	1207.70371	0.82597	0.00033334	-2.2428	-0.00090514	-1.4168	-0.0005718	403.5742849619775	82.098	2.6206	82.524	81.753	84.373	0.42646					188	63	3	0	0	0	0.69071	1	9583	9583		33.039	0.28887	1	14382000			19493	4999	13166	13176	22533	22533					0.10816170071370834
KAKVKKAP	8	Unmodified	_KAKVKKAP_					0	0	0			REV__ENST00000485019.1_1_1:235323532-235324526:-|nuORF	REV__ENST00000485019.1_1_1:235323532-235324526:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3002014160156	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.86294	1	7642	7642		8.8223	0	1	6323600	+		19494	23026	13167	13177	22534	22534					0.14627262273359065
KAKVQVRE	8	Unmodified	_KAKVQVRE_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2942810058594	2	479.295633	956.576714	-0.50734	-0.00024316	0.34572	0.0001657	-0.16162	-7.7463E-05	479.2956593475875	17.406	0.40918	16.795	16.52	16.929	-0.6107					18	8	3	0	0	0	0.91472	1	254	254		44.117	0	1	98503	+		19495	20239	13168	13178	22535	22535					0.09668868917037798
KALETKLDM	9	Unmodified	_KALETKLDM_					0	0	0		ENSG00000131437|ENST00000403231|KIF3A;nc|ENSG00000131437|Q9Y496|KIF3A;ENST00000487055.1_1_5:132036305-132039285:-|nuORF	ENSG00000131437|ENST00000403231|KIF3A	ENSG00000131437|ENST00000403231|KIF3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.7899169921875	2	524.788992	1047.56343	1.0057	0.0005278	1.9154	0.0010052	2.9211	0.001533	524.7898229915963	16.286	0.30648	15.799	15.607	15.913	-0.48718					9	6	2	0	0	0	0.74721	1	115	115		37.159	5.2042	1	94027			19496	3731	13169	13179	22536	22536					0.041552500227680866
KALFSHLLKR	10	Unmodified	_KALFSHLLKR_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.9219055175781	3	404.92403	1211.75026	0.44861	0.00018165	-3.2485	-0.0013154	-2.7999	-0.0011337	404.92260093832465	26.168	1.321	26.213	25.795	27.116	0.045507					105	39	4	0	0	0	0.85633	1	1046	1046		21.686	0.8486	1	304530	+		19497	18527	13170	13180	22537	22537					0.15285654693320794
KALGKSTV	8	Unmodified	_KALGKSTV_					0	0	0		nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I	nc|ENSG00000263001|P78347-2|GTF2I	nc|ENSG00000263001|P78347-2|GTF2I	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.2529602050781	2	402.252903	802.491253	0.012695	5.1065E-06	-0.68019	-0.00027361	-0.66749	-0.0002685	402.25250817632156	19.505	0.25266	19.576	19.45	19.703	0.070713					20	12	2	0	0	0	0.83058	1	430	430		12.959	0	1	89617			19498	8936	13171	13181	22538	22538					0.0821070373136763
KALILEEI	8	Unmodified	_KALILEEI_					0	0	0		ENSG00000062725|ENST00000083182|APPBP2	ENSG00000062725|ENST00000083182|APPBP2	ENSG00000062725|ENST00000083182|APPBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7906494140625	2	464.789318	927.564084	-1.1356	-0.00052781	3.8995	0.0018125	2.764	0.0012847	464.7910242247121	36.975	1.5496	36.999	36.145	37.695	0.023624					81	41	3	0	0	0	0.86288	1	2059	2059		26.796	0	1	297830			19499	1085	13172	13182	22539	22539					0.09740412734140591
KALKIEVSYL	10	Unmodified	_KALKIEVSYL_					0	0	0			REV__ENST00000515518.6_1_5:109760554-109978041:-|nuORF	REV__ENST00000515518.6_1_5:109760554-109978041:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3539428710938	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.85466	1	12963	12963		20.947	2.6848	1	3937500	+		19500	22892	13173	13183	22540	22540					0.12132017751105195
KALKRLSTLSD	11	Unmodified	_KALKRLSTLSD_					0	0	0			REV__ENST00000506381.1_1_4:169519393-169519789:-|nuORF	REV__ENST00000506381.1_1_4:169519393-169519789:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.25225830078125	3	411.250472	1230.72959	1.1406	0.00046905	3.4049	0.0014003	4.5455	0.0018693	411.2518036890788	34.264	1.089	34.569	34.2	35.289	0.30495					78	26	4	0	0	0	0.73277	1	2547	2547		25.892	0.82393	1	1640900	+		19501	27889	13174	13184	22541	22541					0.12345019522990697
KALKSSGL	8	Unmodified	_KALKSSGL_					0	0	0		nc|ENSG00000159374|Q8TC57-3|M1AP;ENST00000464686.5_1_2:74785845-74804048:-|nuORF;nc|ENSG00000159374|Q8TC57-4|M1AP;ENSG00000159374|ENST00000421985|M1AP;nc|ENSG00000159374|Q8TC57-2|M1AP	nc|ENSG00000159374|Q8TC57-3|M1AP	nc|ENSG00000159374|Q8TC57-3|M1AP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.25262451171875	2	402.252903	802.491253	0.012695	5.1066E-06	-0.92253	-0.00037109	-0.90984	-0.00036598	402.25241799368695	20.158	0.44477	20.234	20.057	20.502	0.075848					34	22	2	0	0	0	0.7961	1	472	472		17.365	0.89182	1	276350			19502	5528	13175	13185	22542	22542					0.08210703731378999
KALKSVATKTT	11	Unmodified	_KALKSVATKTT_					0	0	0			REV__ENSG00000166963|ENST00000300231|MAP1A	REV__ENSG00000166963|ENST00000300231|MAP1A	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.357177734375	2	574.355888	1146.69722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.39	1	100.39	99.889	100.89	0								0	0	0	0.56276	1	10178	10178		31.634	2.4847	1		+		19503	21346	13176	13186	22543	22543					0.12974232119995577
KALKSVATKTT	11	Unmodified	_KALKSVATKTT_					0	0	0			REV__ENSG00000166963|ENST00000300231|MAP1A	REV__ENSG00000166963|ENST00000300231|MAP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.356201171875	2	574.355888	1146.69722	2.697	0.001549	-2.6609	-0.0015283	0.036094	2.0731E-05	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.67041	1	10798	10798		36.318	4.7878	1	738540	+		19504	21346	13176	13186	22544	22544					0.12974232119995577
KALKSVATKTT	11	Unmodified	_KALKSVATKTT_					0	0	0			REV__ENSG00000166963|ENST00000300231|MAP1A	REV__ENSG00000166963|ENST00000300231|MAP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3565673828125	2	574.355888	1146.69722	1.1072	0.0006359	-1.1162	-0.00064109	-0.0090433	-5.1941E-06	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.6493	2	10739	10646;10739		38.754	5.9412	1	708140	+		19505	21346	13176	13186	22545;22546	22546					0.12974232119995577
KALLKLEK	8	Unmodified	_KALLKLEK_					0	0	0		ENST00000392357.1_1_17:80012338-80013241:+|nuORF;ENSG00000169727|ENST00000578552|GPS1;nc|ENSG00000169727|Q13098|GPS1;nc|ENSG00000169727|Q13098-7|GPS1;nc|ENSG00000169727|Q13098-6|GPS1	ENST00000392357.1_1_17:80012338-80013241:+|nuORF	ENST00000392357.1_1_17:80012338-80013241:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	471.8439636230469	2	471.820953	941.627353	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.34	1	114.4	113.9	114.9	0.061073								0	0	0	0.31173	1	12224	12224		9.4706	0	1				19506	6519	13177	13187	22547	22547					0.15420398242031297
KALLLLVLP	9	Unmodified	_KALLLLVLP_					0	0	0		nc|ENSG00000072201|Q8TBB1-2|LNX1	nc|ENSG00000072201|Q8TBB1-2|LNX1	nc|ENSG00000072201|Q8TBB1-2|LNX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.34844970703125	2	490.349346	978.684139	-0.93267	-0.00045733	-1.8406	-0.00090254	-2.7733	-0.0013599	490.3483419074247	70.54	3.2224	70.924	70.189	73.411	0.38416					144	77	2	0	0	0	0.7932	1	7856	7856		14.664	0	1	229730			19507	14776	13178	13188	22548	22548					0.19394445798559445
KALNRQGAS	9	Unmodified	_KALNRQGAS_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7664489746094	2	472.76724	943.519927	-0.93597	-0.0004425	0.72881	0.00034456	-0.20716	-9.7939E-05	472.7674891607628	81.886	2.6588	82.031	80.209	82.868	0.14512					108	66	2	0	0	0	0.78058	1	7748	7748		30.504	3.8107	1	189560			19508	5333	13179	13189	22549	22549					0.04590821360523023
KALPLPTP	8	Unmodified	_KALPLPTP_					0	0	0		nc|ENSG00000188158|Q6T4R5-2|NHS;ENSG00000188158|ENST00000676302|NHS;nc|ENSG00000188158|Q6T4R5-4|NHS;nc|ENSG00000188158|Q6T4R5-3|NHS	nc|ENSG00000188158|Q6T4R5-2|NHS	nc|ENSG00000188158|Q6T4R5-2|NHS	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.76434326171875	2	418.765646	835.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.263	1	33.475	32.975	33.975	0.21168								0	0	0	0.29755	1	2402	2402		24.203	0	1				19509	7910	13180	13190	22550	22550					0.0924017825378769
KALQDEWDAV	10	Unmodified	_KALQDEWDAV_					0	0	0		ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	587.2890014648438	2	587.790578	1173.5666	0.1931	0.0001135	3.399	0.0019979	3.5921	0.0021114	587.792789477628	22.192	0.32621	22.256	22.088	22.414	0.064745					15	13	2	0	0	0	0.37624	1	661	661		30.318	2.4355	1	18509			19510	2513	13181	13191	22551	22551					-0.013237835988547886
KALQLPGIWLL	11	Unmodified	_KALQLPGIWLL_					0	0	0		chr11:122028845-122033334|15|11.93|0.05|7.86|-|0|TE_info:LTR16,LTR16_dup2194,ERVL,LTR,donor,-,122033334,122033467|MIR100HG,None|2	chr11:122028845-122033334|15|11.93|0.05|7.86|-|0|TE_info:LTR16,LTR16_dup2194,ERVL,LTR,donor,-,122033334,122033467|MIR100HG,None|2	chr11:122028845-122033334|15|11.93|0.05|7.86|-|0|TE_info:LTR16,LTR16_dup2194,ERVL,LTR,donor,-,122033334,122033467|MIR100HG,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.390625	2	626.394816	1250.77508	6.325	0.0039619	-3.3425	-0.0020937	2.9824	0.0018682	626.3925398868604	109.87	0.514	109.94	109.72	110.23	0.068001					34	23	3	0	0	0	0.75041	1	13338	13338		21.96	1.9631	1	960900			19511	94	13182	13192	22552	22552					0.15972289776027537
KALRKKKKHL	10	Unmodified	_KALRKKKKHL_					0	0	0			REV__nc|ENSG00000152953|Q9NY57-2|STK32B	REV__nc|ENSG00000152953|Q9NY57-2|STK32B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.4326171875	2	625.432599	1248.85064	2.9227	0.0018279	-4.3296	-0.0027079	-1.4069	-0.00087995	625.429727159543	108.86	0.68909	108.83	108.52	109.21	-0.029381					65	29	3	0	0	0	0.91876	1	12076	12076		6.3127	0.39155	1	3045400	+		19512	20324	13183	13193	22553	22553					0.2361731174698889
KALSGEAQPQ	10	Unmodified	_KALSGEAQPQ_					0	0	0			REV__nc|ENSG00000211898|P01880-1|IGHD	REV__nc|ENSG00000211898|P01880-1|IGHD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.7708740234375	2	514.772188	1027.52982	1.3658	0.00070307	-1.8997	-0.00097793	-0.53393	-0.00027485	514.7710878109294	23.659	0.51255	23.085	22.792	23.304	-0.57415					19	11	2	0	0	0	0.4503	1	1080	1080		59.931	13.474	1	134180	+		19513	30193	13184	13194	22554	22554					0.01715964575214457
KALVEPAREKL	11	Unmodified	_KALVEPAREKL_					0	0	0			REV__ENST00000375749.7_1_20:30824335-30824383:+|nuORF	REV__ENST00000375749.7_1_20:30824335-30824383:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.387451171875	2	627.382437	1252.75032	-0.21902	-0.00013741	0.20475	0.00012846	-0.01427	-8.9526E-06	627.3824199275489	117.28	0.27765	117.21	117	117.28	-0.075302					26	9	4	0	0	0	0.77421	1	12592	12592		16.717	0.71061	1	4893700	+		19514	25819	13185	13195	22555	22555					0.1340560990265658
KALVIGKDHES	11	Unmodified	_KALVIGKDHES_					0	0	0		ENSG00000153046|ENST00000397588|CDYL;nc|ENSG00000153046|Q9Y232|CDYL	ENSG00000153046|ENST00000397588|CDYL	ENSG00000153046|ENST00000397588|CDYL	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.8388061523438	2	598.83532	1195.65609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.578	1	49.048	48.548	49.548	0.46941								0	0	0	0.56276	1	4689	4689		30.569	0.25114	1				19515	5211	13186	13196	22556	22556					0.0660847108051712
KALYGILIVSA	11	Unmodified	_KALYGILIVSA_					0	0	0			REV__ENSG00000117501|ENST00000367759|MROH9	REV__ENSG00000117501|ENST00000367759|MROH9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.356689453125	2	574.357899	1146.70125	-1.0357	-0.00059487	-2.3996	-0.0013783	-3.4354	-0.0019731	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.73893	1	10734	10734		24.519	3.5723	1	715310	+		19516	18265	13187	13197	22557	22557					0.13376321613714026
KALYGILIVSA	11	Unmodified	_KALYGILIVSA_					0	0	0			REV__ENSG00000117501|ENST00000367759|MROH9	REV__ENSG00000117501|ENST00000367759|MROH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3583984375	2	574.357899	1146.70125	-1.3728	-0.00078849	-2.0963	-0.001204	-3.4692	-0.0019925	574.3566305310679	99.909	3.0439	100.08	98.131	101.18	0.17199					143	70	3	0	0	0	0.70737	1	10324	10324		30.318	3.6248	1	243780	+		19517	18265	13187	13197	22558	22558					0.13376321613714026
KALYLEKFKA	10	Unmodified	_KALYLEKFKA_					0	0	0			REV__ENSG00000029725|ENST00000537505|RABEP1	REV__ENSG00000029725|ENST00000537505|RABEP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.2411804199219	3	404.244658	1209.71214	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.073	1	31.026	30.526	31.526	-0.047064								0	0	0	0.45132	1	1734	1734		23.378	3.3474	1		+		19518	16271	13188	13198	22559	22559					0.11567723988014222
KAMKTKPLFN	10	Unmodified	_KAMKTKPLFN_					0	0	0			REV__ENSG00000127362|ENST00000247879|TAS2R3	REV__ENSG00000127362|ENST00000247879|TAS2R3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3428344726562	2	589.341726	1176.6689	0.15554	9.1664E-05	1.9962	0.0011764	2.1517	0.0012681	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.86471	1	11211	11211		30.318	1.1477	1	10540000	+		19519	18730	13189	13199	22560	22560					0.08763210939059718
KAMTVKAAKW	10	Unmodified	_KAMTVKAAKW_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3290405273438	2	567.328619	1132.64269	-0.468	-0.00026551	2.8575	0.0016211	2.3895	0.0013556	567.330130226139	95.712	2.0668	95.712	95.357	97.424	0					107	47	3	0	0	0	0.86348	1	9616	9616		31.53	5.9558	1	608220	+		19520	16117	13190	13200	22561	22561					0.08166941767581193
KAMVRSHRVTT	11	Unmodified	_KAMVRSHRVTT_					0	0	0		nc|ENSG00000215811|A8MVZ5|BTNL10P	nc|ENSG00000215811|A8MVZ5|BTNL10P	nc|ENSG00000215811|A8MVZ5|BTNL10P	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.3690185546875	2	643.361513	1284.70847	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.45	1	115.38	114.88	115.88	-0.069672								0	0	0	0.56276	1	12375	12375		23.523	2.5758	1				19521	15255	13191	13201	22562	22562					0.07750730942484552
KANENIKWGK	10	Unmodified	_KANENIKWGK_					0	0	0		L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|7|1|sense	L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|7|1|sense	L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|7|1|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.3448486328125	2	594.330205	1186.64586	0.89439	0.00053156	2.8111	0.0016707	3.7055	0.0022023	594.3317807202881	103.42	0.41834	103.54	103.25	103.67	0.12621					14	10	2	0	0	0	0.37624	1	10898	10898		35.152	3.6222	1	110390			19522	14687	13192	13202	22563	22563					0.059999081459409354
KANPQVLKK	9	Unmodified	_KANPQVLKK_					0	0	0		nc|ENSG00000078304|Q13362-2|PPP2R5C	nc|ENSG00000078304|Q13362-2|PPP2R5C	nc|ENSG00000078304|Q13362-2|PPP2R5C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.3272094726562	2	513.326934	1024.63931	0.56232	0.00028865	-0.41048	-0.00021071	0.15184	7.7942E-05	513.3265557990428	17.999	0.39868	17.378	17.232	17.631	-0.62141					13	8	2	0	0	0	0.15928	2	335	326;335		82.305	30.97	1	358540			19523	14784	13193	13203	22564;22565	22565					0.12798014985219197
KANPQVLKK	9	Unmodified	_KANPQVLKK_					0	0	0		nc|ENSG00000078304|Q13362-2|PPP2R5C	nc|ENSG00000078304|Q13362-2|PPP2R5C	nc|ENSG00000078304|Q13362-2|PPP2R5C	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	513.326934	1024.63931	0.83572	0.000429	-0.86541	-0.00044424	-0.029685	-1.5238E-05	513.326236894648	17.831	0.36691	17.349	17.192	17.559	-0.48256	-0.014563	-0.00031262	NaN	82.305	20	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	291020			19524	14784	13193	13203							0.12798014985219197
KAPLLMLN	8	Unmodified	_KAPLLMLN_					0	0	0			REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2744140625	2	450.272781	898.531009	0.5956	0.00026818	3.7021	0.0016669	4.2977	0.0019351	450.27426852387816	83.248	0.64474	83.395	83.056	83.7	0.14694					23	14	2	0	0	0	0.87064	1	8059	8059		29.15	2.3535	1	150310	+		19525	15561	13194	13204	22566	22566					0.07768507410435177
KAPVCIVTI	9	Unmodified	_KAPVCIVTI_					0	0	0			REV__ENST00000540691.5_2_19:18671277-18672912:+|nuORF	REV__ENST00000540691.5_2_19:18671277-18672912:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2890930175781	2	472.285889	942.557224	2.1469	0.001014	2.0105	0.00094952	4.1574	0.0019635	472.2867264071782	114.66	1.2655	114.67	114.37	115.64	0.0094528					102	61	2	0	0	0	0.7932	1	13858	13858		24.203	2.2429	1	83672	+		19526	28468	13195	13205	22567	22567					0.08364776581913702
KAPVKKKA	8	Unmodified	_KAPVKKKA_					0	0	0		ENSG00000187837|ENST00000343677|H1-2	ENSG00000187837|ENST00000343677|H1-2	ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2999572753906	2	435.300188	868.585822	-1.3785	-0.00060007	1.5278	0.00066505	0.14927	6.4979E-05	435.30073733409733	75.396	1.3729	75.483	74.943	76.316	0.087639					63	36	2	0	0	0	0.79929	1	6946	6946		18.324	3.6603	1	527430			19527	7888	13196	13206	22568	22568					0.14627262273359065
KAQFVILHG	9	Unmodified	_KAQFVILHG_					0	0	0		nc|ENSG00000101977|P10911-6|MCF2;nc|ENSG00000101977|P10911-2|MCF2;nc|ENSG00000101977|P10911|MCF2;nc|ENSG00000101977|P10911-4|MCF2;nc|ENSG00000101977|P10911-3|MCF2;ENSG00000101977|ENST00000519895|MCF2	nc|ENSG00000101977|P10911-6|MCF2	nc|ENSG00000101977|P10911-6|MCF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.7989807128906	2	506.800552	1011.58655	-0.1225	-6.2083E-05	1.1991	0.00060769	1.0766	0.00054561	506.8011249172422	46.216	2.1586	46.137	45.418	47.576	-0.079006					85	63	2	0	0	0	0.7932	1	3365	3365		25.45	3.4903	1	271040			19528	1977	13197	13207	22569	22569					0.08122056922422871
KAQLDVKTMY	10	Unmodified	_KAQLDVKTMY_					0	0	0			REV__ENSG00000167768|ENST00000252244|KRT1	REV__ENSG00000167768|ENST00000252244|KRT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.8207397460938	2	598.820824	1195.62709	-0.55429	-0.00033192	-2.7384	-0.0016398	-3.2927	-0.0019717	598.8192924084227	71.422	0.39654	71.456	71.322	71.718	0.034004					27	16	2	0	0	0	0.80179	1	6770	6770		39.253	2.0937	1	126800	+	+	19529	15979	13198	13208	22570	22570					0.037106104598706224
KAQLQKSKG	9	Unmodified	_KAQLQKSKG_					0	0	0		ENSG00000158352|ENST00000376020|SHROOM4;nc|ENSG00000158352|Q9ULL8-2|SHROOM4	ENSG00000158352|ENST00000376020|SHROOM4	ENSG00000158352|ENST00000376020|SHROOM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.8021240234375	2	494.300916	986.587279	-0.90607	-0.00044787	1.0812	0.00053443	0.17511	8.6555E-05	494.3015193767554	16.639	0.57203	16.557	16.369	16.941	-0.0821					38	24	2	0	0	0	0.7932	1	143	143		19.104	0.77911	1	32822			19530	5473	13199	13209	22571	22571					0.09344851571472645
KAQNLYQEL	9	Unmodified	_KAQNLYQEL_					0	0	0		ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.29541015625	2	553.795663	1105.57677	-0.14197	-7.862E-05	-1.1138	-0.00061684	-1.2558	-0.00069546	553.7956902824818	71.77	1.9369	72.32	71.66	73.597	0.55009					121	46	4	0	0	0	0.58668	1	7999	7999		47.657	1.6851	1	1387300			19531	1521	13200	13210	22572	22572					0.028208241263882883
KAQVLLFAH	9	Unmodified	_KAQVLLFAH_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.809326171875	2	513.808377	1025.6022	-1.4445	-0.00074222	2.568	0.0013195	1.1235	0.00057724	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.77546	1	3686	3686		31.955	1.4512	1	1675700	+		19532	20437;29946;29947	13201	13211	22573	22573					0.09042343439477918
KARGKKGH	8	Unmodified	_KARGKKGH_					0	0	0			REV__ENSG00000066422|ENST00000312938|ZBTB11	REV__ENSG00000066422|ENST00000312938|ZBTB11	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.93994140625	2	441.275035	880.535518	-1.6481	-0.00072726	-2.5487	-0.0011247	-4.1968	-0.001852	441.27378914745776	56.072	0.65646	56.072	55.617	56.274	0					31	19	2	0	0	0	0.4196	1	4769	4769		8.2313	0	1	131000	+		19533	16523	13202	13212	22574	22574					0.09047152668222225
KARGKKGH	8	Unmodified	_KARGKKGH_					0	0	0			REV__ENSG00000066422|ENST00000312938|ZBTB11	REV__ENSG00000066422|ENST00000312938|ZBTB11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9394226074219	2	441.275035	880.535518	-1.4884	-0.00065678	-2.7457	-0.0012116	-4.2341	-0.0018684	441.2737146456143	56.083	0.69081	56.147	55.599	56.29	0.06411					50	31	2	0	0	0	0.4196	1	4707	4707		8.2313	3.5495	1	178550	+		19534	16523	13202	13212	22575	22575					0.09047152668222225
KARKELVLGF	10	Unmodified	_KARKELVLGF_					0	0	0		ENST00000465079.1_1_1:155938929-155948853:-|nuORF	ENST00000465079.1_1_1:155938929-155948853:-|nuORF	ENST00000465079.1_1_1:155938929-155948853:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.8504638671875	2	580.861141	1159.70773	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.6	1	119.69	119.19	120.19	0.087753								0	0	0	0.45132	1	12572	12572		16.473	3.514	1				19535	12103	13203	13213	22576	22576					0.13426259565085275
KARKKISMTG	10	Unmodified	_KARKKISMTG_					0	0	0			REV__ENSG00000085999|ENST00000371975|RAD54L	REV__ENSG00000085999|ENST00000371975|RAD54L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.845947265625	2	560.336975	1118.6594	3.1463	0.001763	2.8199	0.0015801	5.9662	0.0033431	560.3384571607505	112.87	1.2169	112.84	112.7	113.91	-0.024811					58	33	2	0	0	0	0.8651	1	12569	12569		25.574	0.12388	1	1119600	+		19536	16904	13204	13214	22577	22577					0.10481442653531303
KARNFLVF	8	Unmodified	_KARNFLVF_					0	0	0		ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.7952880859375	2	497.795269	993.575986	-0.23858	-0.00011877	1.4256	0.00070966	1.187	0.00059089	497.79577554464987	49.055	0.99467	48.961	48.599	49.594	-0.093178					54	23	3	0	0	0	0.884	1	3777	3777		33.516	3.674	1	401360			19537	1276	13205	13215	22578	22578					0.0789407426799471
KARQFCSY	8	Carbamidomethyl (C)	_KARQFC(Carbamidomethyl (C))SY_	KARQFC(1)SY		KARQFC(53)SY		0	1	0			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.25341796875	2	530.255651	1058.49675	-1.0706	-0.00056768	-3.4317	-0.0018197	-4.5022	-0.0023873	530.2536993167932	67.979	0.99502	67.979	67.627	68.622	0					70	39	2	0	0	0	0.93786	1	6001	6001		53.351	10.877	1	821190	+		19538	17810	13206	13216	22579	22579	232				-0.030159407484688927
KASKRRKRRKN	11	Unmodified	_KASKRRKRRKN_					0	0	0		nc|ENSG00000163935|Q9UHJ3-2|SFMBT1;ENSG00000163935|ENST00000394752|SFMBT1	nc|ENSG00000163935|Q9UHJ3-2|SFMBT1	nc|ENSG00000163935|Q9UHJ3-2|SFMBT1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.62298583984375	3	476.64292	1426.90693	-0.84382	-0.0004022	-0.87293	-0.00041608	-1.7167	-0.00081828	476.6424203966951	107.84	0.17915	107.98	107.81	107.99	0.13866					6	4	2	0	0	0	0.181	1	11598	11598		15.337	6.5382	1	1443400			19539	5887	13207	13217	22580	22580					0.21055332636342428
KASLHVVAVP	10	Unmodified	_KASLHVVAVP_					0	0	0		ENST00000588534.1_1_19:2832263-2834847:+|nuORF;ENSG00000172006|ENST00000317243|ZNF554	ENST00000588534.1_1_19:2832263-2834847:+|nuORF	ENST00000588534.1_1_19:2832263-2834847:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8136901855469	2	510.813659	1019.61277	0.55381	0.0002829	-2.2532	-0.001151	-1.6994	-0.00086807	510.8124157533129	80.736	1.2851	81.262	80.695	81.98	0.52676					56	30	3	0	0	0	0.8651	1	9307	9307		25.574	0	1	1223300			19540	6734	13208	13218	22581	22581					0.10374326093892705
KASLKKYQAQ	10	Unmodified	_KASLKKYQAQ_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.8358154296875	2	582.840405	1163.66626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.053	1	15.566	15.066	16.066	-0.48718								0	0	0	0.45132	1	81	81		61.691	13.732	1		+		19541	15467	13209	13219	22582	22582					0.09097078805734782
KASLKKYQAQ	10	Unmodified	_KASLKKYQAQ_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.8361206054688	2	582.840405	1163.66626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.055	1	15.456	14.956	15.956	-0.59873								0	0	0	0.45132	1	82	82		65.465	19.009	1		+		19542	15467	13209	13219	22583	22583					0.09097078805734782
KASLLIDL	8	Unmodified	_KASLLIDL_					0	0	0			REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.77484130859375	2	436.776211	871.537869	-1.8179	-0.00079401	-1.324	-0.00057831	-3.1419	-0.0013723	436.77554812926275	90.686	2.546	90.866	90.262	92.808	0.18029					181	60	4	0	0	0	0.91472	1	9137	9137		44.117	0	1	8965000	+		19543	22827	13210	13220	22584	22584					0.09696143562666748
KASLQISNK	9	Unmodified	_KASLQISNK_					0	0	0			REV__ENSG00000072071|ENST00000361434|ADGRL1	REV__ENSG00000072071|ENST00000361434|ADGRL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7934875488281	2	494.792924	987.571294	-1.0341	-0.00051168	1.0424	0.00051576	0.008238	4.0761E-06	494.7933146843752	26.709	0.78882	26.681	26.36	27.149	-0.027704					34	18	3	0	0	0	0.64555	1	1145	1145		44.377	7.3487	1	107090	+		19544	16636	13211	13221	22585	22585					0.07701145334567627
KASLQISNK	9	Unmodified	_KASLQISNK_					0	0	0			REV__ENSG00000072071|ENST00000361434|ADGRL1	REV__ENSG00000072071|ENST00000361434|ADGRL1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	494.792924	987.571294	-0.22625	-0.00011195	0.3002	0.00014854	0.07395	3.659E-05	494.7928986334224	26.563	0.76746	26.524	26.237	27.004	-0.038525	0.014805	0.0011991	NaN	44.377	33	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99666	+		19545	16636	13211	13221							0.07701145334567627
KASLQISNK	9	Unmodified	_KASLQISNK_					0	0	0			REV__ENSG00000072071|ENST00000361434|ADGRL1	REV__ENSG00000072071|ENST00000361434|ADGRL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	494.792924	987.571294	0.56669	0.00028039	-4.6064	-0.0022792	-4.0397	-0.0019988	494.7920666460178	26.203	0.056021	26.232	26.197	26.253	0.02817	-0.27798	-0.0036564	NaN	44.377	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14501	+		19546	16636	13211	13221							0.07701145334567627
KASTSKIV	8	Unmodified	_KASTSKIV_					0	0	0		nc|ENSG00000047056|Q9Y2I8-2|WDR37;ENSG00000047056|ENST00000263150|WDR37;nc|ENSG00000047056|Q9Y2I8-3|WDR37	nc|ENSG00000047056|Q9Y2I8-2|WDR37	nc|ENSG00000047056|Q9Y2I8-2|WDR37	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2577209472656	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.81897	1	588	588		20.947	0.95016	1	867930			19547	954	13212	13222	22586	22586					0.07886686385813846
KATPKVRQ	8	Unmodified	_KATPKVRQ_					0	0	0		ENSG00000145975|ENST00000274673|FAM217A	ENSG00000145975|ENST00000274673|FAM217A	ENSG00000145975|ENST00000274673|FAM217A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2896423339844	2	464.290351	926.566149	1.8464	0.00085725	-1.5871	-0.00073688	0.25925	0.00012037	464.28948357873554	94.132	2.3405	94.073	92.594	94.934	-0.059212					106	55	3	0	0	0	0.87479	1	10010	10010		30.504	6.3009	1	300610			19548	4807	13213	13223	22587	22587					0.0999288626261432
KATSVTVK	8	Unmodified	_KATSVTVK_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.25799560546875	2	417.258185	832.501818	0.73077	0.00030492	0.058378	2.4359E-05	0.78915	0.00032928	417.25810331191536	21.663	2.6932	21.727	21.148	23.842	0.064745					160	99	2	0	0	0	0.80308	1	583	583		16.473	0	1	105380			19549	1214	13214	13224	22588	22588					0.07886686385825215
KATSVTVK	8	Unmodified	_KATSVTVK_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2579040527344	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.81184	1	582	582		19.997	4.355	1	867930			19550	1214	13214	13224	22589	22589					0.07886686385825215
KATVFHKL	8	Unmodified	_KATVFHKL_					0	0	0			REV__ENST00000497302.1_1_1:12042112-12052340:+|nuORF	REV__ENST00000497302.1_1_1:12042112-12052340:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2857360839844	2	472.28982	942.565087	-1.7052	-0.00080534	-2.46	-0.0011618	-4.1652	-0.0019672	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.85277	1	12875	12875		25.45	2.4077	1	3080300	+		19551	18213	13215	13225	22590	22590					0.09150671893701201
KATVMDVKP	9	Unmodified	_KATVMDVKP_					0	0	0		ENSG00000132383|ENST00000254719|RPA1	ENSG00000132383|ENST00000254719|RPA1	ENSG00000132383|ENST00000254719|RPA1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7799987792969	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.979	1	87.129	86.629	87.629	0.14956								0	0	0	0.29475	1	8578	8578		32.812	0	1				19552	3790	13216	13226	22591	22591					0.0480328471392113
KATVVPLP	8	Unmodified	_KATVVPLP_					0	0	0		ENSG00000156869|ENST00000646001|FRRS1;nc|ENSG00000156869|Q6ZNA5-2|FRRS1	ENSG00000156869|ENST00000646001|FRRS1	ENSG00000156869|ENST00000646001|FRRS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7672119140625	2	412.765646	823.516739	-0.33758	-0.00013934	2.1313	0.00087971	1.7937	0.00074037	412.7669144536039	43.714	1.8956	43.657	42.672	44.567	-0.056812					93	46	3	0	0	0	0.8347	1	3021	3021		23.042	4.7181	1	313210			19553	5397	13217	13227	22592	22592					0.09792178253815109
KATVYNVFGY	10	Unmodified	_KATVYNVFGY_					0	0	0			REV__ENSG00000066044|ENST00000407627|ELAVL1	REV__ENSG00000066044|ENST00000407627|ELAVL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	581.7696533203125	2	581.300581	1160.58661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.931	1	60.931	60.431	61.431	0								0	0	0	0.45132	1	5348	5348		30.318	2.2362	1		+		19554	16514	13218	13228	22593	22593					0.012740121317847297
KAVAEQIPLLV	11	Unmodified	_KAVAEQIPLLV_					0	0	0		nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8672485351562	2	590.868631	1179.72271	-0.23931	-0.0001414	-3.2253	-0.0019057	-3.4646	-0.0020471	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.73893	1	10847	10847		24.519	1.4767	1	39787000			19555	4170	13219	13229	22594	22594					0.14003706642415636
KAVAIKRTPAP	11	Unmodified	_KAVAIKRTPAP_					0	0	0			REV__nc|ENSG00000145016|Q92622-3|RUBCN	REV__nc|ENSG00000145016|Q92622-3|RUBCN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	576.37158203125	2	576.36659	1150.71863	-0.79221	-0.00045661	4.0486	0.0023335	3.2564	0.0018769	576.3687421520677	43.737	1.7237	43.702	42.631	44.355	-0.034916					96	40	3	0	0	0	0.75544	1	3444	3444		20.837	0.84038	1	245670	+		19556	19922	13220	13230	22595	22595					0.14929661939368088
KAVAIKRTPAP	11	Unmodified	_KAVAIKRTPAP_					0	0	0			REV__nc|ENSG00000145016|Q92622-3|RUBCN	REV__nc|ENSG00000145016|Q92622-3|RUBCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.36865234375	2	576.36659	1150.71863	0.52808	0.00030437	3.353	0.0019326	3.8811	0.0022369	576.368351063032	43.383	1.3544	43.388	42.868	44.222	0.0057526					70	33	3	0	0	0	0.7434	1	2981	2981		23.523	0.48021	1	281870	+		19557	19922	13220	13230	22596	22596					0.14929661939368088
KAVAIKRTPAP	11	Unmodified	_KAVAIKRTPAP_					0	0	0			REV__nc|ENSG00000145016|Q92622-3|RUBCN	REV__nc|ENSG00000145016|Q92622-3|RUBCN	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	576.36659	1150.71863	-1.1857	-0.0006834	4.8058	0.0027699	3.6201	0.0020865	576.3692069652303	43.303	1.7585	43.303	42.57	44.329	0	-0.068123	0.00068152	NaN	20.837	110	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	302820	+		19558	19922	13220	13230							0.14929661939368088
KAVAIKRTPAP	11	Unmodified	_KAVAIKRTPAP_					0	0	0			REV__nc|ENSG00000145016|Q92622-3|RUBCN	REV__nc|ENSG00000145016|Q92622-3|RUBCN	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	576.36659	1150.71863	-0.60638	-0.0003495	4.2101	0.0024266	3.6038	0.0020771	576.3688060228938	43.511	1.939	43.485	41.995	43.934	-0.026764	0.11375	-5.1031E-06	NaN	20.837	106	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	251900	+		19559	19922	13220	13230							0.14929661939368088
KAVAIKRTPAP	11	Unmodified	_KAVAIKRTPAP_					0	0	0			REV__nc|ENSG00000145016|Q92622-3|RUBCN	REV__nc|ENSG00000145016|Q92622-3|RUBCN	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	576.36659	1150.71863	-0.79221	-0.00045661	4.0486	0.0023335	3.2564	0.0018769	576.3687421520677	43.737	1.7237	43.702	42.631	44.355	-0.034916	0.33143	-0.00019136	NaN	20.837	96	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	245670	+		19560	19922	13220	13230							0.14929661939368088
KAVAIKRTPAP	11	Unmodified	_KAVAIKRTPAP_					0	0	0			REV__nc|ENSG00000145016|Q92622-3|RUBCN	REV__nc|ENSG00000145016|Q92622-3|RUBCN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	576.36659	1150.71863	-1.9288	-0.0011117	5.2677	0.0030361	3.3389	0.0019244	576.3694570425007	42.752	1.2607	43.186	42.725	43.986	0.4334	-0.18529	0.001214	NaN	20.837	69	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	466290	+		19561	19922	13220	13230							0.14929661939368088
KAVAIKRTPAP	11	Unmodified	_KAVAIKRTPAP_					0	0	0			REV__nc|ENSG00000145016|Q92622-3|RUBCN	REV__nc|ENSG00000145016|Q92622-3|RUBCN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	576.36659	1150.71863	-2.2608	-0.001303	5.7503	0.0033143	3.4895	0.0020112	576.3697428967959	42.454	1.6168	43.151	42.731	44.348	0.69754	-0.21941	0.0017702	NaN	20.837	85	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	567540	+		19562	19922	13220	13230							0.14929661939368088
KAVASFKHALK	11	Unmodified	_KAVASFKHALK_					0	0	0		nc|ENSG00000205571|Q16637-4|SMN1;nc|ENSG00000205571|Q16637-3|SMN1;nc|ENSG00000205571|Q16637-2|SMN1;ENSG00000205571|ENST00000380743|SMN2;ENSG00000172062|ENST00000380707|SMN1	nc|ENSG00000205571|Q16637-4|SMN1	nc|ENSG00000205571|Q16637-4|SMN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.5804138183594	3	400.580152	1198.71863	0.73402	0.00029403	-0.81738	-0.00032743	-0.083364	-3.3394E-05	400.91435232122257	118.78	0.12209	118.84	118.79	118.91	0.06057					7	4	2	0	0	0	0.77205	1	12490	12490		17.167	0.44936	1	34007			19563	15219	13221	13231	22597	22597					0.1272166193934936
KAVDIKKPLVS	11	Unmodified	_KAVDIKKPLVS_					0	0	0		ENSG00000100294|ENST00000290429|MCAT	ENSG00000100294|ENST00000290429|MCAT	ENSG00000100294|ENST00000290429|MCAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3790893554688	2	599.381906	1196.74926	0.97491	0.00058434	-4.0729	-0.0024412	-3.098	-0.0018569	599.3792959797308	103.23	2.9032	103.41	102.97	105.87	0.18297					219	73	5	0	0	0	0.7144	1	10993	10993		29.17	1.0886	1	22539000			19564	1822	13222	13232	22598	22598					0.15875395533748815
KAVHLLIYLT	10	Unmodified	_KAVHLLIYLT_					0	0	0		ENSG00000128310|ENST00000249041|GALR3	ENSG00000128310|ENST00000249041|GALR3	ENSG00000128310|ENST00000249041|GALR3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.8663940429688	2	585.865892	1169.71723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.773	1	24.445	23.945	24.945	-0.32825								0	0	0	0.45132	1	1220	1220		27.882	7.8855	1				19565	3536	13223	13233	22599	22599					0.1391602785060968
KAVKTLGIVM	10	Unmodified	_KAVKTLGIVM_					0	0	0		ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	ENSG00000146399|ENST00000275216|TAAR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.336181640625	2	530.33337	1058.65219	1.0282	0.00054528	3.9099	0.0020735	4.9381	0.0026188	530.3354292157709	16.113	0.30346	15.626	15.436	15.739	-0.48718					9	6	2	0	0	0	0.82886	1	86	86		37.812	12.237	1	156170			19566	4842	13224	13234	22600	22600					0.12520710053127004
KAVLPHLVY	9	Unmodified	_KAVLPHLVY_					0	0	0			REV__ENSG00000008311|ENST00000417368|AASS	REV__ENSG00000008311|ENST00000417368|AASS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2731323242188	2	520.318577	1038.6226	-0.080658	-4.1968E-05	-2.1987	-0.001144	-2.2794	-0.001186	520.3173319731451	44.025	0.61309	44.476	44.239	44.853	0.45024					23	14	2	0	0	0	0.20789	1	4037	4037		31.955	26.034	1	309210	+		19567	16135	13225	13235	22601	22601					0.10483514099269087
KAVPSGPPK	9	Unmodified	_KAVPSGPPK_					0	0	0			REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.7665100097656	2	440.766178	879.517802	0.40229	0.00017731	0.077187	3.4022E-05	0.47947	0.00021134	440.7660677899125	18.295	0.85853	17.674	17.21	18.069	-0.62141					39	19	3	0	0	0	0.55097	1	393	393		49.442	10.635	1	167020	+		19568	29779	13226	13236	22602	22602					0.07322392622711504
KAVRKLDN	8	Unmodified	_KAVRKLDN_					0	0	0			REV__ENSG00000165801|ENST00000298694|ARHGEF40	REV__ENSG00000165801|ENST00000298694|ARHGEF40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2876892089844	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.87479	1	10096	10096		30.504	1.3541	1	48696000	+		19569	21218	13227	13237	22603	22603					0.0874858239999412
KAVSRGKV	8	Unmodified	_KAVSRGKV_					0	0	0		ENSG00000172292|ENST00000305747|CERS6	ENSG00000172292|ENST00000305747|CERS6	ENSG00000172292|ENST00000305747|CERS6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.7718200683594	2	422.771794	843.529036	1.0428	0.00044087	0.056815	2.402E-05	1.0996	0.00046489	422.7716706307083	20.211	0.50489	19.752	19.549	20.053	-0.4591					20	10	3	0	0	0	0.90983	1	622	622		42.396	1.8235	1	133510			19570	6760	13228	13238	22604	22604					0.1010121471686034
KAVWKIKELP	10	Unmodified	_KAVWKIKELP_					0	0	0		nc|ENSG00000196867|Q8NHY6-2|ZFP28;ENSG00000196867|ENST00000301318|ZFP28	nc|ENSG00000196867|Q8NHY6-2|ZFP28	nc|ENSG00000196867|Q8NHY6-2|ZFP28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.58917236328125	3	404.588536	1210.74378	-1.3097	-0.00052987	3.1121	0.0012591	1.8024	0.00072923	404.5896495246431	39.318	1.9056	39.271	38.511	40.416	-0.047005					116	44	4	0	0	0	0.86621	1	2776	2776		26.063	0.9374	1	380940			19571	8108	13229	13239	22605	22605					0.14683716741933495
KAWGRLWAG	9	Unmodified	_KAWGRLWAG_					0	0	0			REV__ENST00000407315.5_1_2:242573437-242576781:-|nuORF	REV__ENST00000407315.5_1_2:242573437-242576781:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7937622070312	2	522.790518	1043.56648	1.2723	0.00066513	4.1016	0.0021443	5.3739	0.0028094	522.7925484697116	21.895	1.1217	21.452	20.87	21.992	-0.44324					57	25	4	0	0	0	0.58151	1	819	819		47.916	1.9434	1	389000	+		19572	26315	13230	13240	22606	22606					0.046443059824468946
KAWLQRRRKVR	11	Unmodified	_KAWLQRRRKVR_					0	0	0		nc|ENSG00000293552|Q9H3R0-3|KDM4C;nc|ENSG00000293552|Q9H3R0-4|KDM4C;nc|ENSG00000293552|Q9H3R0-2|KDM4C;ENSG00000107077|ENST00000381309|KDM4C	nc|ENSG00000293552|Q9H3R0-3|KDM4C	nc|ENSG00000293552|Q9H3R0-3|KDM4C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	499.6489562988281	3	499.651415	1495.93242	-0.64989	-0.00032472	-2.7718	-0.0013849	-3.4217	-0.0017096	499.984422407744	16.008	0.23701	16.056	15.966	16.203	0.047804					21	10	3	0	0	0	0.79224	2	105	105;108		12.957	1.9593	1	118100			19573	2329	13231	13241	22607;22608	22607					0.20428807158737072
KAYAFRFAE	9	Unmodified	_KAYAFRFAE_					0	0	0			REV__nc|ENSG00000133475|P36268-2|GGT2P	REV__nc|ENSG00000133475|P36268-2|GGT2P	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.3204956054688	2	551.787641	1101.56073	0.038751	2.1382E-05	-3.9514	-0.0021803	-3.9127	-0.002159	551.785411105436	34.693	0.49774	34.637	34.355	34.853	-0.056385					16	10	2	0	0	0	0.20789	1	2172	2172		18.324	6.8134	1	28627	+		19574	17128	13232	13242	22609	22609					0.0140116268012207
KAYIMMQGYL	10	Unmodified	_KAYIMMQGYL_					0	0	0			REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28	REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.5389404296875	3	406.540089	1216.59844	-1.9198	-0.00078047	-0.65187	-0.00026501	-2.5716	-0.0010455	406.539735348608	30.736	0.46292	30.799	30.591	31.054	0.063124					55	22	3	0	0	0	0.73395	1	1363	1363		42.864	1.7842	1	256910	+		19575	23670	13233	13243	22610	22610					-0.0011983044089447503
KAYTLKKMILS	11	Unmodified	_KAYTLKKMILS_					0	0	0			REV__ENSG00000081148|ENST00000193391|IMPG2	REV__ENSG00000081148|ENST00000193391|IMPG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3930053710938	2	648.391416	1294.76828	1.6039	0.00104	0.64067	0.00041541	2.2446	0.0014554	648.3917432358439	106.08	2.1363	106.23	104.51	106.65	0.14843					114	53	4	0	0	0	0.68532	1	11340	11340		33.922	7.2287	1	52760000	+		19576	16818	13234	13244	22611	22611					0.13268608833141116
KAYTLKKMILS	11	Unmodified	_KAYTLKKMILS_					0	0	0			REV__ENSG00000081148|ENST00000193391|IMPG2	REV__ENSG00000081148|ENST00000193391|IMPG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3924560546875	2	648.391416	1294.76828	-1.1411	-0.00073988	2.5898	0.0016792	1.4487	0.0009393	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75164	1	12490	12490		21.686	0.8486	1	2297700	+		19577	16818	13234	13244	22612	22612					0.13268608833141116
KAYWAPLQK	9	Unmodified	_KAYWAPLQK_					0	0	0		ENST00000308979.6_1_4:38800499-38805961:-|nuORF;ENST00000509754.5_1_4:38802433-38805961:-|nuORF;ENST00000505744.5_1_4:38792706-38805958:-|nuORF	ENST00000308979.6_1_4:38800499-38805961:-|nuORF	ENST00000308979.6_1_4:38800499-38805961:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.8114013671875	2	552.813659	1103.61277	-1.0661	-0.00058937	-2.5691	-0.0014202	-3.6352	-0.0020096	552.8121887831883	28.272	0.78354	28.175	27.885	28.669	-0.096945					41	18	3	0	0	0	0.62081	1	1682	1682		45.952	1.5748	1	385320			19578	9895	13235	13245	22613	22613					0.06510326093871299
KCAILAAAI	9	Unmodified	_KCAILAAAI_					0	0	0			REV__nc|ENSG00000185792|Q7RTR0-2|NLRP9	REV__nc|ENSG00000185792|Q7RTR0-2|NLRP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26544189453125	2	437.264956	872.515359	0.03062	1.3389E-05	1.7544	0.00076715	1.7851	0.00078054	437.2656144717129	22.266	1.1262	22.354	22.073	23.199	0.088013					130	57	3	0	0	0	0.76402	1	655	655		35.201	1.0282	1	2198600	+		19579	22792	13236	13246	22614	22614					0.07400220893384812
KCAKHLAS	8	Unmodified	_KCAKHLAS_					0	0	0			REV__ENSG00000178852|ENST00000331493|EFCAB13	REV__ENSG00000178852|ENST00000331493|EFCAB13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.23553466796875	2	429.23673	856.458907	0.92962	0.00039903	-3.3729	-0.0014478	-2.4433	-0.0010487	429.2351427168519	63.189	2.3191	63.218	62.635	64.954	0.028133					251	82	4	0	0	0	0.87922	1	5944	5944		31.955	5.1588	1	5799800	+		19580	22298	13237	13247	22615	22615					0.024935930567153264
KCCFIALLAYV	11	Unmodified	_KCCFIALLAYV_					0	0	0			REV__ENST00000482896.5_1_3:33701004-33701076:-|nuORF	REV__ENST00000482896.5_1_3:33701004-33701076:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3359985351562	2	622.332513	1242.65047	2.9643	0.0018448	3.2705	0.0020354	6.2349	0.0038802	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.72918	1	12314	12314		26.693	1.1189	1	435720	+		19581	27477	13238	13248	22616	22616					0.03885332972799915
KCEIIKRR	8	Unmodified	_KCEIIKRR_					0	0	0		ENST00000418437.1_1_13:21834372-21835116:+|nuORF	ENST00000418437.1_1_13:21834372-21835116:+|nuORF	ENST00000418437.1_1_13:21834372-21835116:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3034057617188	2	523.318586	1044.62262	1.2403	0.00064905	2.4993	0.0013079	3.7396	0.001957	523.3197999816737	90.395	0.37267	90.441	90.262	90.634	0.04644					11	8	2	0	0	0	0.4196	1	9386	9386		21.96	0	1	50014			19582	11422	13239	13249	22617	22617					0.10209190827617931
KCEMHLKESI	10	Unmodified	_KCEMHLKESI_					0	0	0			REV__ENST00000519858.1_1_8:59513803-59535956:-|nuORF	REV__ENST00000519858.1_1_8:59513803-59535956:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7850646972656	3	406.538748	1216.59441	-0.39611	-0.00016103	1.1083	0.00045056	0.71216	0.00028952	406.5391454081636	32.988	0.70608	32.934	32.673	33.379	-0.05434					35	17	3	0	0	0	0.37624	1	2000	2000		42.338	27.559	1	97335	+		19583	16288	13240	13250	22618	22618					-0.005219199346356618
KCESDVICY	9	Unmodified	_KCESDVICY_					0	0	0			REV__ENSG00000100991|ENST00000252015|TRPC4AP	REV__ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2293090820312	2	530.22791	1058.44127	0.18726	9.9289E-05	0.25408	0.00013472	0.44134	0.00023401	530.2279066231735	29.208	0.5835	29.32	29.087	29.67	0.11225					59	29	3	0	0	0	0.72402	1	1232	1232		38.806	3.1879	1	206490	+		19584	17234	13241	13251	22619	22619					-0.0856153505110342
KCGLREIL	8	Unmodified	_KCGLREIL_					0	0	0			REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.53912353515625	2	466.273312	930.532072	-1.411	-0.0006579	1.8875	0.00088009	0.47652	0.00022219	466.2735567154194	30.598	0.13261	30.626	30.538	30.671	0.028618					4	2	2	0	0	0	0.4196	1	2011	2011		24.203	3.7209	1	17563	+		19585	17948	13242	13252	22620	22620					0.06402721779340936
KCIACQNPG	9	Unmodified	_KCIACQNPG_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2335510253906	2	467.21768	932.420807	0.078424	3.6641E-05	-4.4831	-0.0020946	-4.4047	-0.0020579	467.2165541899269	66.624	0.17335	67.01	66.851	67.024	0.38581					6	4	2	0	0	0	0.20789	1	7270	7270		30.504	3.7075	1	41292			19586	5220	13243	13253	22621	22621					-0.04810660920247756
KCIGKVKE	8	Unmodified	_KCIGKVKE_					0	0	0		ENST00000296530.12_1_4:159048632-159048695:-|nuORF	ENST00000296530.12_1_4:159048632-159048695:-|nuORF	ENST00000296530.12_1_4:159048632-159048695:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.7683410644531	2	452.767863	903.521173	-0.29923	-0.00013548	1.5988	0.00072387	1.2995	0.00058839	452.76847785034585	29.879	0.94346	29.836	29.448	30.392	-0.043095					34	22	2	0	0	0	0.8347	1	1577	1577		23.042	2.5607	1	69345			19587	9738	13244	13254	22622	22622					0.065553194050608
KCIIWTVSEY	10	Unmodified	_KCIIWTVSEY_					0	0	0			REV__ENSG00000133742|ENST00000523022|CA1	REV__ENSG00000133742|ENST00000523022|CA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3134765625	2	621.315374	1240.6162	-0.48747	-0.00030287	-2.2051	-0.0013701	-2.6926	-0.001673	621.3138017387486	68.778	0.94327	68.741	68.457	69.4	-0.036301					71	37	3	0	0	0	0.74274	1	6638	6638		42.396	3.1433	1	439870	+		19588	19093	13245	13255	22623	22623					0.005512080855851309
KCISCSNG	8	Unmodified	_KCISCSNG_					0	0	0		ENST00000461942.5_1_9:116079031-116083765:-|nuORF;nc|ENSG00000148225|Q8NA23-2|WDR31;ENSG00000148225|ENST00000374193|WDR31	ENST00000461942.5_1_9:116079031-116083765:-|nuORF	ENST00000461942.5_1_9:116079031-116083765:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.1763000488281	2	406.175481	810.336409	0.71021	0.00028847	-0.18118	-7.3593E-05	0.52903	0.00021488	406.1754560618925	96.49	1.6931	96.894	96.458	98.151	0.40451					82	40	3	0	0	0	0.88601	1	11641	11641		34.173	5.9183	1	1730200			19589	4941	13246	13256	22624	22624					-0.07634611737012165
KCIVWGVA	8	Unmodified	_KCIVWGVA_					0	0	0		nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4;ENSG00000141076|ENST00000314423|UTP4	nc|ENSG00000141076|Q969X6-2|UTP4	nc|ENSG00000141076|Q969X6-2|UTP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2624816894531	2	438.244024	874.473494	-1.2638	-0.00055384	-2.4613	-0.0010787	-3.7251	-0.0016325	438.2430227847726	40.837	0.17186	41.427	41.28	41.451	0.58915					7	4	2	0	0	0	0.4196	1	3529	3529		20.482	0	1	1683400			19590	4477	13247	13257	22625	22625					0.031236652048619362
KCKAQLIVR	9	Unmodified	_KCKAQLIVR_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.7804565429688	2	529.828786	1057.64302	-0.36644	-0.00019415	4.0313	0.0021359	3.6648	0.0019417	529.8308239074219	55.683	0.36868	55.647	55.336	55.705	-0.036823					14	10	2	0	0	0	0.20789	1	4646	4646		27.882	0	1	41787	+		19591	20903	13248	13258	22626	22626					0.11650361487431837
KCKFQQVVVV	10	Unmodified	_KCKFQQVVVV_					0	0	0			REV__ENST00000494955.1_1_20:44596076-44596721:-|nuORF	REV__ENST00000494955.1_1_20:44596076-44596721:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3428955078125	2	589.341726	1176.6689	0.82336	0.00048524	1.2532	0.00073856	2.0765	0.0012238	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.85934	1	11260	11260		35.618	10.044	1	9460500	+		19592	23287	13249	13259	22627	22627					0.08763210939059718
KCKPSKLVKY	10	Unmodified	_KCKPSKLVKY_					0	0	0			REV__ENSG00000158077|ENST00000299481|NLRP14	REV__ENSG00000158077|ENST00000299481|NLRP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.357177734375	2	597.357376	1192.7002	1.5032	0.00089792	-3.6858	-0.0022018	-2.1827	-0.0013038	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.86348	1	10974	10974		31.53	3.6476	1	1501500	+		19593	20585	13250	13260	22628	22628					0.11155783973163125
KCLMKKVG	8	Unmodified	_KCLMKKVG_					0	0	0		ENST00000540744.5_1_19:53232028-53238278:-|nuORF	ENST00000540744.5_1_19:53232028-53238278:-|nuORF	ENST00000540744.5_1_19:53232028-53238278:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.7651672363281	2	453.766809	905.519064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.282	1	42.244	41.744	42.744	-0.038223								0	0	0	0.29353	1	3239	3239		28.254	2.8041	1				19594	13506	13251	13261	22629	22629					0.06252567395608821
KCLMKKVG	8	Unmodified	_KCLMKKVG_					0	0	0		ENST00000540744.5_1_19:53232028-53238278:-|nuORF	ENST00000540744.5_1_19:53232028-53238278:-|nuORF	ENST00000540744.5_1_19:53232028-53238278:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7646484375	2	453.766809	905.519064	-1.5148	-0.00068738	-1.805	-0.00081904	-3.3198	-0.0015064	453.76593536298236	40.85	0.48289	41.439	41.181	41.664	0.58915					44	13	4	0	0	0	0.91005	1	3535	3535		42.474	17.024	1	23640000			19595	13506	13251	13261	22630	22630					0.06252567395608821
KCLMKKVG	8	Unmodified	_KCLMKKVG_					0	0	0		ENST00000540744.5_1_19:53232028-53238278:-|nuORF	ENST00000540744.5_1_19:53232028-53238278:-|nuORF	ENST00000540744.5_1_19:53232028-53238278:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7643127441406	2	453.766809	905.519064	-1.6067	-0.00072906	-1.5689	-0.0007119	-3.1756	-0.001441	453.76606039248026	41.272	1.9725	41.906	41.675	43.648	0.6339					112	50	4	0	0	0	0.92973	1	3614	3614		50.025	0	1	8512600			19596	13506	13251	13261	22631	22631					0.06252567395608821
KCLRKPVL	8	Unmodified	_KCLRKPVL_					0	0	0		ENSG00000185862|ENST00000330927|EVI2B;nc|ENSG00000185862|P34910-2|EVI2B	ENSG00000185862|ENST00000330927|EVI2B	ENSG00000185862|ENST00000330927|EVI2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80682373046875	2	478.807322	955.600092	-1.7576	-0.00084154	-0.70314	-0.00033667	-2.4607	-0.0011782	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.86288	1	2595	2595		26.796	1.3459	1	336090			19597	7748	13252	13262	22632	22632					0.12051591429997188
KCLRKPVL	8	Unmodified	_KCLRKPVL_					0	0	0		ENSG00000185862|ENST00000330927|EVI2B;nc|ENSG00000185862|P34910-2|EVI2B	ENSG00000185862|ENST00000330927|EVI2B	ENSG00000185862|ENST00000330927|EVI2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8041687011719	2	478.807322	955.600092	0.18646	8.928E-05	-3.0807	-0.001475	-2.8942	-0.0013858	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.86288	1	2913	2913		26.796	3.7536	1	371600			19598	7748	13252	13262	22633	22633					0.12051591429997188
KCLRRKPKPK	10	Unmodified	_KCLRRKPKPK_					0	0	0			REV__ENST00000399247.6_1_6:29694759-29696203:-|nuORF	REV__ENST00000399247.6_1_6:29694759-29696203:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.7171936035156	3	418.604415	1252.79141	-0.20716	-8.6717E-05	0.98204	0.00041109	0.77488	0.00032437	418.605142468844	61.27	0.20625	61.824	61.723	61.93	0.55386					7	4	2	0	0	0	0.37624	1	6539	6539		10.587	3.5681	1	84345	+		19599	26222	13253	13263	22634	22634					0.1751309246112669
KCNTATCA	8	Unmodified	_KCNTATCA_					0	0	0		ENSG00000121351|ENST00000240652|IAPP	ENSG00000121351|ENST00000240652|IAPP	ENSG00000121351|ENST00000240652|IAPP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.1760559082031	2	406.175481	810.336409	1.6845	0.0006842	-1.7031	-0.00069174	-0.018562	-7.5394E-06	406.1750996382843	99.289	1.0283	99.652	99.329	100.36	0.36292					64	25	4	0	0	0	0.87922	1	12027	12027		31.955	3.7006	1	2334600			19600	3177	13254	13264	22635	22635					-0.07634611737023533
KCPEFTRFAL	10	Unmodified	_KCPEFTRFAL_					0	0	0			REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.21673583984375	3	404.546231	1210.61686	-0.35301	-0.00014281	3.0194	0.0012215	2.6664	0.0010787	404.54741587561455	27.836	0.65628	27.798	27.553	28.209	-0.038525					23	14	2	0	0	0	0.37624	1	1379	1379		20.837	7.8797	1	44202	+		19601	19457	13255	13265	22636	22636					0.01998047525307811
KCPVLLRK	8	Unmodified	_KCPVLLRK_					0	0	0		ENST00000433921.5_1_2:219503064-219516433:-|nuORF;nc|ENSG00000115568|P52746|ZNF142;ENSG00000115568|ENST00000411696|ZNF142	ENST00000433921.5_1_2:219503064-219516433:-|nuORF	ENST00000433921.5_1_2:219503064-219516433:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8058166503906	2	478.807322	955.600092	-1.7576	-0.00084154	-0.70314	-0.00033667	-2.4607	-0.0011782	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.84341	1	2369	2369		24.203	5.8783	1	336090			19602	2856	13256	13266	22637	22637					0.12051591430019926
KCQKHAADETY	11	Unmodified	_KCQKHAADETY_					0	0	0			REV__ENST00000406875.7_1_7:139257479-139257596:-|nuORF	REV__ENST00000406875.7_1_7:139257479-139257596:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	647.8041381835938	2	647.298244	1292.58194	1.385	0.00089649	2.6652	0.0017252	4.0502	0.0026217	647.3003381948532	53.286	1.1652	53.9	53.408	54.573	0.61436					57	27	3	0	0	0	0.45916	1	5416	5416		54.776	5.3348	1	1196400	+		19603	26310	13257	13267	22638	22638					-0.052652400732995375
KCSLAFAII	9	Unmodified	_KCSLAFAII_					0	0	0			REV__ENSG00000115020|ENST00000264380|PIKFYVE	REV__ENSG00000115020|ENST00000264380|PIKFYVE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.2779235839844	2	483.278063	964.541574	2.0431	0.00098738	-0.56456	-0.00027284	1.4785	0.00071454	483.27782445100183	95.324	2.0754	95.266	94.681	96.756	-0.057526					132	48	4	0	0	0	0.7932	1	10285	10285		23.042	1.3402	1	1278800	+		19604	18080	13258	13268	22639	22639					0.05788490064878715
KCSNKWVQL	9	Carbamidomethyl (C)	_KC(Carbamidomethyl (C))SNKWVQL_	KC(1)SNKWVQL		KC(96)SNKWVQL		0	1	0			REV__ENST00000304414.11_1_16:18810104-18812862:-|nuORF	REV__ENST00000304414.11_1_16:18810104-18812862:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	581.8036499023438	2	581.805508	1161.59646	0.64741	0.00037667	-3.4092	-0.0019835	-2.7618	-0.0016068	581.8033899164078	64.583	0.90575	64.709	64.291	65.197	0.12545					96	31	4	0	0	0	0.084975	1	5677	5677		96.19	8.494	1	1338100	+		19605	24809	13259	13269	22640	22640	305				0.022128768654965825
KCTRSWRTWRW	11	Unmodified	_KCTRSWRTWRW_					0	0	0			REV__nc|ENSG00000117400|P40238-2|MPL	REV__nc|ENSG00000117400|P40238-2|MPL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2827758789062	3	522.601733	1564.78337	0.93623	0.00048928	4.2483	0.0022202	5.1846	0.0027095	522.6038636139812	96.62	0.83468	97.024	96.582	97.417	0.40451					28	19	2	0	0	0	0.18293	1	11644	11644		4.8861	0	1	146230	+		19606	29801	13260	13270	22641	22641					0.023569134737044806
KCTRSWRTWRW	11	Unmodified	_KCTRSWRTWRW_					0	0	0			REV__nc|ENSG00000117400|P40238-2|MPL	REV__nc|ENSG00000117400|P40238-2|MPL	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	522.601733	1564.78337	1.91	0.00099819	2.9393	0.0015361	4.8493	0.0025343	522.6031502680165	96.431	0.59042	96.836	96.505	97.095	0.40498	-0.09413	-0.0013619	NaN	8.0344	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56670	+		19607	29801	13260	13270							0.023569134737044806
KCTSNLTK	8	Unmodified	_KCTSNLTK_					0	0	0			REV__ENST00000398970.5_1_17:1324731-1324842:-|nuORF	REV__ENST00000398970.5_1_17:1324731-1324842:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.761474609375	2	447.739302	893.464052	-0.088961	-3.9831E-05	2.3721	0.0010621	2.2831	0.0010222	447.7406825730137	23.75	0.50983	23.368	23.153	23.663	-0.38178					33	11	4	0	0	0	0.4196	1	1055	1055		30.504	3.7075	1	234070	+		19608	26218	13261	13271	22642	22642					0.013058521286779978
KCYKKMNIKL	10	Unmodified	_KCYKKMNIKL_					0	0	0			REV__ENSG00000065320|ENST00000173229|NTN1	REV__ENSG00000065320|ENST00000173229|NTN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.3144836425781	3	423.578766	1267.71447	0.28583	0.00012107	-1.2297	-0.00052088	-0.94388	-0.00039981	423.5782734996963	19.292	0.26561	18.662	18.49	18.756	-0.62961					10	5	2	0	0	0	0.37624	1	513	513		20.837	0	1	47645			19609	16495	13262	13272	22643	22643					0.09132113129794561
KCYQGTTLSS	10	Unmodified	_KCYQGTTLSS_					0	0	0		ENST00000449503.6_1_3:57743439-57817152:+|nuORF	ENST00000449503.6_1_3:57743439-57817152:+|nuORF	ENST00000449503.6_1_3:57743439-57817152:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.494140625	2	544.258056	1086.50156	-2.5998	-0.001415	-2.6421	-0.001438	-5.2419	-0.002853	544.2564425839618	41.691	0.26465	42.105	42.048	42.313	0.4139					9	6	2	0	0	0	0.37624	1	3681	3681		49.536	3.5638	1	155460			19610	11876	13263	13273	22644	22644					-0.038231013963468286
KDAHFEFEV	9	Unmodified	_KDAHFEFEV_					0	0	0		nc|ENSG00000089177|Q96L93-4|KIF16B;ENSG00000089177|ENST00000354981|KIF16B;nc|ENSG00000089177|Q96L93-5|KIF16B	nc|ENSG00000089177|Q96L93-4|KIF16B	nc|ENSG00000089177|Q96L93-4|KIF16B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8163452148438	2	561.266739	1120.51892	-0.16007	-8.9839E-05	0.82067	0.00046061	0.6606	0.00037078	561.7679901546331	71.382	0.45425	71.767	71.586	72.041	0.38449					21	10	3	0	0	0	0.20789	1	7973	7973		15.642	0	1	62976			19611	1615	13264	13274	22645	22645					-0.03651437799044288
KDAKTKKVV	9	Unmodified	_KDAKTKKVV_					0	0	0		ENSG00000198900|ENST00000361337|TOP1	ENSG00000198900|ENST00000361337|TOP1	ENSG00000198900|ENST00000361337|TOP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.16796875	2	508.826766	1015.63898	0.39996	0.00020351	2.9928	0.0015228	3.3927	0.0017263	508.82828421957896	53.826	0.7533	54.24	53.827	54.58	0.4139					22	17	2	0	0	0	0.20532	1	5418	5418		56.434	18.622	1	97083			19612	8363	13265	13275	22646	22646					0.1317859526536722
KDALRGVAL	9	Unmodified	_KDALRGVAL_					0	0	0			REV__ENSG00000010292|ENST00000315579|NCAPD2	REV__ENSG00000010292|ENST00000315579|NCAPD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7908020019531	2	471.790184	941.565815	0.19858	9.3689E-05	-0.026827	-1.2657E-05	0.17176	8.1033E-05	471.7899160853561	28.445	0.78111	28.272	27.979	28.76	-0.17336					28	19	2	0	0	0	0.58668	1	1724	1724		47.657	5.2612	1	183360	+		19613	16161	13266	13276	22647	22647					0.0926946654275298
KDAPIKMQ	8	Unmodified	_KDAPIKMQ_					0	0	0		nc|ENSG00000137074|Q7Z2E3-8|APTX	nc|ENSG00000137074|Q7Z2E3-8|APTX	nc|ENSG00000137074|Q7Z2E3-8|APTX	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.75909423828125	2	465.757495	929.500437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.454	1	63.481	62.981	63.981	0.027142								0	0	0	0.31091	1	5942	5942		47.916	5.5195	1				19614	14943	13267	13277	22648	22648					0.03286729025387558
KDAVWSNVR	9	Unmodified	_KDAVWSNVR_					0	0	0			REV__ENSG00000221887|ENST00000408945|HMSD	REV__ENSG00000221887|ENST00000408945|HMSD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7680053710938	2	537.788173	1073.56179	-1.3038	-0.00070118	-0.24339	-0.00013089	-1.5472	-0.00083208	537.7879518956017	45.058	0.93456	45.902	45.262	46.196	0.84438					29	22	2	0	0	0	0.20789	1	4126	4126		39.253	0	1	351970	+		19615	23713	13268	13278	22649	22649					0.027953770490285024
KDAYTCKEE	9	Unmodified	_KDAYTCKEE_					0	0	0			REV__ENSG00000107771|ENST00000372088|CCSER2	REV__ENSG00000107771|ENST00000372088|CCSER2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.7957153320312	2	543.742239	1085.46993	-1.4191	-0.00077163	2.563	0.0013936	1.1439	0.00062199	543.7431095998187	29.332	1.2918	29.303	28.57	29.862	-0.029207					36	29	2	0	0	0	0.20532	1	1754	1754		75.043	14.071	1	64182	+		19616	17673	13269	13279	22650	22650					-0.06939094150334313
KDCGTEKCFD	10	Unmodified	_KDCGTEKCFD_					0	0	0		ENSG00000109758|ENST00000382774|HGFAC	ENSG00000109758|ENST00000382774|HGFAC	ENSG00000109758|ENST00000382774|HGFAC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.2333374023438	2	573.233724	1144.45289	-1.144	-0.0006558	1.3065	0.00074894	0.16249	9.3145E-05	573.2343039259655	29.001	1.1207	28.972	28.57	29.691	-0.029207					62	25	3	0	0	0	0.70553	1	1774	1774		44.377	9.2252	1	912100			19617	2481	13270	13280	22651	22651					-0.11355338027760808
KDCGTEKCFD	10	Unmodified	_KDCGTEKCFD_					0	0	0		ENSG00000109758|ENST00000382774|HGFAC	ENSG00000109758|ENST00000382774|HGFAC	ENSG00000109758|ENST00000382774|HGFAC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.2337036132812	2	573.233724	1144.45289	0.69324	0.00039739	-0.67655	-0.00038782	0.016694	9.5696E-06	573.2331643277087	29.173	1.2859	28.999	28.547	29.833	-0.17336					67	29	3	0	0	0	0.42393	1	1814	1814		62.107	10.915	1	1232400			19618	2481	13270	13280	22652	22652					-0.11355338027760808
KDCLPCMFVE	10	Unmodified	_KDCLPCMFVE_					0	0	0			REV__ENST00000529242.1_1_11:26563580-26584615:+|nuORF	REV__ENST00000529242.1_1_11:26563580-26584615:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	591.8411865234375	2	592.761063	1183.50757	-0.46354	-0.00027477	-0.89989	-0.00053342	-1.3634	-0.00080819	592.7597658072966	54.255	0.1678	54.84	54.749	54.917	0.58474					5	3	2	0	0	0	0.37624	1	5529	5529		11.097	0	1	108560	+		19619	15492	13271	13281	22653	22653					-0.07684042480696007
KDDAITAYK	9	Unmodified	_KDDAITAYK_					0	0	0		nc|ENSG00000100227|Q9BY77-2|POLDIP3;ENSG00000100227|ENST00000252115|POLDIP3	nc|ENSG00000100227|Q9BY77-2|POLDIP3	nc|ENSG00000100227|Q9BY77-2|POLDIP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7686157226562	2	512.769114	1023.52368	0.92826	0.00047598	-0.98997	-0.00050762	-0.061706	-3.1641E-05	512.7684512724358	22.716	0.75475	22.297	21.97	22.725	-0.41879					42	17	4	0	0	0	0.67345	1	956	956		42.396	0	1	536540			19620	1811	13272	13282	22654	22654					0.01285446343683816
KDDGRVMKLS	10	Unmodified	_KDDGRVMKLS_					0	0	0		ENST00000276925.6_1_9:22009008-22009314:-|nuORF	ENST00000276925.6_1_9:22009008-22009314:-|nuORF	ENST00000276925.6_1_9:22009008-22009314:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.804443359375	2	574.808248	1147.60194	-1.3326	-0.00076597	-1.5115	-0.00086883	-2.8441	-0.0016348	574.8072287376872	33.945	0.68733	33.945	33.651	34.339	0					36	19	2	0	0	0	0.70553	1	1772	1772		44.377	1.5129	1	241710			19621	9604	13273	13283	22655	22655					0.03404555657311903
KDDLRSDYP	9	Unmodified	_KDDLRSDYP_					0	0	0			REV__nc|ENSG00000163946|Q9UK61-3|TASOR	REV__nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.7476806640625	2	554.767103	1107.51965	0.024039	1.3336E-05	0.31982	0.00017743	0.34386	0.00019076	554.7665030457252	49.83	0.4132	50.278	50.102	50.515	0.44761					12	9	2	0	0	0	0.20789	1	4908	4908		49.442	3.4693	1	140570	+		19622	21001	13274	13284	22656	22656					-0.029806431500219333
KDDNTSSA	8	Unmodified	_KDDNTSSA_					0	0	0		ENSG00000181544|ENST00000650831|FANCB	ENSG00000181544|ENST00000650831|FANCB	ENSG00000181544|ENST00000650831|FANCB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.18365478515625	2	419.182872	836.35119	-0.57397	-0.0002406	1.7955	0.00075264	1.2215	0.00051204	419.1838227050264	86.505	1.1853	86.959	86.534	87.719	0.4543					81	28	5	0	0	0	0.89494	1	10148	10148		37.159	5.2042	1	2728000			19623	7392	13275	13285	22657	22657					-0.07353125063661992
KDDPDSAIY	9	Unmodified	_KDDPDSAIY_					0	0	0			REV__ENSG00000137809|ENST00000315757|ITGA11	REV__ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2346801757812	2	512.235104	1022.45566	0.21698	0.00011114	-0.34707	-0.00017778	-0.13009	-6.6637E-05	512.2348050225129	58.353	1.0465	58.323	57.938	58.985	-0.030159					76	31	4	0	0	0	0.62081	1	5446	5446		45.952	5.3793	1	1335200	+		19624	19409	13276	13286	22658	22658					-0.054674233069704314
KDDRLKKG	8	Unmodified	_KDDRLKKG_					0	0	0			REV__ENSG00000116254|ENST00000262450|CHD5	REV__ENSG00000116254|ENST00000262450|CHD5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2847900390625	2	480.285266	958.555979	1.5334	0.00073649	-0.84197	-0.00040439	0.69147	0.0003321	480.2847627897493	24.997	0.57834	24.483	24.19	24.768	-0.51365					27	12	3	0	0	0	0.9295	1	1263	1263		55.504	6.0627	1	173720	+		19625	18193	13277	13287	22659	22659					0.07504278537373921
KDDVGILV	8	Unmodified	_KDDVGILV_					0	0	0			REV__nc|ENSG00000236320|P0C7P3-2|SLFN14	REV__nc|ENSG00000236320|P0C7P3-2|SLFN14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.7503967285156	2	429.750193	857.485833	-1.7422	-0.0007487	2.3085	0.00099207	0.56632	0.00024338	429.7510562737313	35.44	2.4929	35.471	35.255	37.748	0.031132					176	69	3	0	0	0	0.91977	1	1944	1944		45.952	0	1	1409200	+		19626	23789	13278	13288	22660	22660					0.05138980148922201
KDEGSNGP	8	Unmodified	_KDEGSNGP_					0	0	0			REV__nc|ENSG00000154529|Q96NU0-2|CNTNAP3B	REV__nc|ENSG00000154529|Q96NU0-2|CNTNAP3B	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.17987060546875	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.01	1	118.07	117.57	118.57	0.059448								0	0	0	0.29344	1	12442	12442		31.955	6.5047	1		+		19627	20392	13279	13289	22661	22661					-0.06336803855469952
KDEIEKLHKK	10	Unmodified	_KDEIEKLHKK_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3771362304688	2	634.372069	1266.72959	6.8434	0.0043413	1.2949	0.00082147	8.1384	0.0051628	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.8505	1	13857	13857		19.104	1.6355	1	75725	+		19628	29959	13280	13290	22662	22662					0.10689019522965282
KDEIELELGTK	11	Unmodified	_KDEIELELGTK_					0	0	0			REV__ENSG00000171714|ENST00000324559|ANO5	REV__ENSG00000171714|ENST00000324559|ANO5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.91802978515625	3	425.566126	1273.67655	2.075	0.00088304	3.1474	0.0013394	5.2224	0.0022225	425.5673845134836	24.594	0.97729	24.08	23.702	24.679	-0.51365					54	21	4	0	0	0	0.17363	1	1268	1268		14.779	0	1	567210	+		19629	21760	13281	13291	22663	22663					0.0506559694963471
KDELLTRR	8	Unmodified	_KDELLTRR_					0	0	0			REV__ENSG00000162337|ENST00000294304|LRP5;REV__ENST00000529993.5_1_11:68154039-68171824:+|nuORF	REV__ENSG00000162337|ENST00000294304|LRP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8031005859375	2	515.803823	1029.59309	0.99159	0.00051147	-1.0995	-0.00056714	-0.10793	-5.5671E-05	515.8030952914191	22.982	0.88607	22.563	22.23	23.116	-0.41879					49	20	4	0	0	0	0.53378	1	984	984		74.255	10.048	1	541750	+		19630	20804;28275	13282	13292	22664	22664					0.07947950083121214
KDERPIARRVR	11	Unmodified	_KDERPIARRVR_					0	0	0			REV__nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	REV__nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.9478454589844	3	465.947898	1394.82186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.068	1	52.068	51.568	52.568	0								0	0	0	0.56276	1	4251	4251		32.034	11.197	1		+		19631	17395	13283	13293	22665	22665					0.14024542379866034
KDEVKSKRQK	10	Unmodified	_KDEVKSKRQK_					0	0	0			REV__ENSG00000038219|ENST00000040738|BOD1L1	REV__ENSG00000038219|ENST00000040738|BOD1L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7370300292969	3	415.913971	1244.72008	-0.38059	-0.00015829	3.9609	0.0016474	3.5803	0.0014891	415.9156354864103	38.246	1.7554	38.768	38.395	40.15	0.52235					100	41	5	0	0	0	0.37624	1	3164	3164		12.957	0	1	1706200	+		19632	16300	13284	13294	22666	22666					0.10751251237456927
KDFAAAQIKQ	10	Unmodified	_KDFAAAQIKQ_					0	0	0			REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8	REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3125610351562	2	560.31148	1118.60841	0.34474	0.00019316	0.17986	0.00010078	0.52459	0.00029394	560.3114568572595	38.447	0.52443	38.389	38.108	38.632	-0.057915					23	15	2	0	0	0	0.60985	1	2274	2274		49.536	1.8787	1	138880	+		19633	30120	13285	13295	22667	22667					0.05384816880314247
KDFIFLKFCK	10	Unmodified	_KDFIFLKFCK_					0	0	0			REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|54|2|sense	REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|54|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2272033691406	3	430.24226	1287.70495	0.31901	0.00013725	-1.4505	-0.00062408	-1.1315	-0.00048683	430.2411847305479	25.62	0.16523	25.363	25.218	25.383	-0.2572					5	3	2	0	0	0	0.37624	1	1337	1337		45.022	12.988	1	26691	+		19634	29653	13286	13296	22668	22668					0.07260668115895896
KDFILHNCI	9	Unmodified	_KDFILHNCI_					0	0	0			REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|118|2|sense	REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|118|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.762451171875	2	551.789327	1101.5641	-0.71206	-0.00039291	2.3076	0.0012733	1.5956	0.00088042	551.790530626109	45.648	0.59793	46.543	46.169	46.767	0.89542					25	14	3	0	0	0	0.20789	1	4271	4271		44.117	9.9443	1	602760	+		19635	29617	13287	13297	22669	22669					0.017380894624920984
KDFIRPKL	8	Unmodified	_KDFIRPKL_					0	0	0		nc|ENSG00000133083|O15075-2|DCLK1;ENSG00000133083|ENST00000360631|DCLK1	nc|ENSG00000133083|O15075-2|DCLK1	nc|ENSG00000133083|O15075-2|DCLK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8105773925781	2	508.816202	1015.61785	-0.94369	-0.00048017	-2.6018	-0.0013239	-3.5455	-0.001804	508.814896871399	43.452	2.9729	44.226	43.866	46.839	0.77379					192	73	5	0	0	0	0.37302	1	3913	3913		87.754	5.5138	1	100420000			19636	3853	13288	13298	22670	22670					0.11066629956508223
KDFITKTPKAM	11	Unmodified	_KDFITKTPKAM_					0	0	0		chr14:23970332-23982495|37|53.43|0.78|6.1|+|2|TE_info:L1PA7,L1PA7_dup11225,L1,LINE,acceptor,+,23982495,23984046|DHRS4L2,None|4	chr14:23970332-23982495|37|53.43|0.78|6.1|+|2|TE_info:L1PA7,L1PA7_dup11225,L1,LINE,acceptor,+,23982495,23984046|DHRS4L2,None|4	chr14:23970332-23982495|37|53.43|0.78|6.1|+|2|TE_info:L1PA7,L1PA7_dup11225,L1,LINE,acceptor,+,23982495,23984046|DHRS4L2,None|4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.359130859375	2	640.357573	1278.70059	-0.024279	-1.5547E-05	2.2238	0.001424	2.1995	0.0014085	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.60058	1	10097	10097		44.377	3.599	1	448130			19637	164	13289	13299	22671	22671					0.07239158902325471
KDFLSTRRI	9	Unmodified	_KDFLSTRRI_					0	0	0		ENST00000517635.2_1_7:27155632-27161591:+|nuORF	ENST00000517635.2_1_7:27155632-27161591:+|nuORF	ENST00000517635.2_1_7:27155632-27161591:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.3350830078125	2	568.332747	1134.65094	0.70406	0.00040014	2.8789	0.0016362	3.583	0.0020363	568.3342850685762	52.838	0.66032	53.452	53.2	53.86	0.61436					40	15	4	0	0	0	0.17307	1	5356	5356		79.451	3.2813	1	1352400			19638	13101	13290	13300	22672	22672					0.08900212008552444
KDFSVVSRK	9	Unmodified	_KDFSVVSRK_					0	0	0			REV__nc|ENSG00000160633|Q15424-2|SAFB	REV__nc|ENSG00000160633|Q15424-2|SAFB	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.3056030273438	2	533.306198	1064.59784	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.611	1	38.622	38.122	39.122	0.011173								0	0	0	0.31117	1	2653	2653		26.693	2.1737	1		+		19639	20728	13291	13301	22673	22673					0.06812834225888764
KDGAQVLSF	9	Unmodified	_KDGAQVLSF_					0	0	0			REV__ENSG00000137975|ENST00000370565|CLCA2	REV__ENSG00000137975|ENST00000370565|CLCA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7284851074219	2	482.758549	963.502546	-0.42168	-0.00020357	-0.3513	-0.00016959	-0.77298	-0.00037316	482.75892447057095	72.807	0.41202	73.361	73.108	73.52	0.55386					11	9	2	0	0	0	0.20789	1	8182	8182		26.693	3.6504	1	81180	+		19640	19427	13292	13302	22674	22674					0.019334810348595965
KDGEDIEEDD	10	Unmodified	_KDGEDIEEDD_					0	0	0		nc|ENSG00000286095|A0A087WV53|SPEGNB	nc|ENSG00000286095|A0A087WV53|SPEGNB	nc|ENSG00000286095|A0A087WV53|SPEGNB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	581.7574462890625	2	582.73058	1163.44661	-1.7071	-0.00099478	4.2131	0.0024551	2.506	0.0014603	583.2324517557582	57.031	0.21138	57.427	57.286	57.498	0.39672					6	4	2	0	0	0	0.37624	1	5901	5901		29.17	5.6474	1	73585			19641	15332	13293	13303	22675	22675					-0.1285786145392649
KDGKLPLLLSR	11	Unmodified	_KDGKLPLLLSR_					0	0	0		ENSG00000076685|ENST00000404739|NT5C2;nc|ENSG00000076685|P49902-2|NT5C2	ENSG00000076685|ENST00000404739|NT5C2	ENSG00000076685|ENST00000404739|NT5C2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9325256347656	3	413.930962	1238.77106	0.23139	9.5777E-05	4.1873	0.0017332	4.4187	0.001829	413.9326448757643	44.768	3.3816	44.817	43.631	47.012	0.048996					183	86	4	0	0	0	0.76087	1	3290	3290		19.627	2.4602	1	706670			19642	1364	13294	13304	22676	22676					0.161222002823024
KDGKSLTK	8	Unmodified	_KDGKSLTK_					0	0	0		ENSG00000166411|ENST00000299518|IDH3A;nc|ENSG00000166411|P50213-2|IDH3A	ENSG00000166411|ENST00000299518|IDH3A	ENSG00000166411|ENST00000299518|IDH3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.7611389160156	2	438.761092	875.507631	0.2247	9.859E-05	0.15313	6.7187E-05	0.37783	0.00016578	438.76107743991633	16.992	0.61783	16.509	16.373	16.991	-0.48256					26	13	3	0	0	0	0.069231	1	203	203		124.08	3.2117	1	931580			19643	6192	13295	13305	22677	22677					0.06489784897451045
KDGKTTVKDLS	11	Unmodified	_KDGKTTVKDLS_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.3329467773438	2	596.33261	1190.65067	2.6389	0.0015737	-2.2849	-0.0013626	0.35402	0.00021111	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.66009	1	10405	10405		37.508	4.6958	1	1305600			19644	7193	13296	13306	22678	22678					0.06296747498049626
KDGKTTVKDLS	11	Unmodified	_KDGKTTVKDLS_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3323974609375	2	596.33261	1190.65067	-0.50602	-0.00030176	0.82043	0.00048925	0.31441	0.00018749	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.66009	1	10247	10247		37.508	5.9784	1	1259900			19645	7193	13296	13306	22679	22679					0.06296747498049626
KDGKTTVKDLS	11	Unmodified	_KDGKTTVKDLS_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.332763671875	2	596.33261	1190.65067	0.85589	0.0005104	-0.38091	-0.00022715	0.47498	0.00028325	596.3322598839247	96.043	3.1049	96.206	95.311	98.416	0.16316					228	72	4	0	0	0	0.6493	1	9856	9856		38.754	3.6016	1	1469100			19646	7193	13296	13306	22680	22680					0.06296747498049626
KDGLRTREPT	10	Unmodified	_KDGLRTREPT_					0	0	0		nc|ENSG00000204305|Q15109-9|AGER	nc|ENSG00000204305|Q15109-9|AGER	nc|ENSG00000204305|Q15109-9|AGER	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	586.823974609375	2	586.822744	1171.63093	-0.73461	-0.00043109	2.4662	0.0014472	1.7316	0.0010162	586.8240526511282	110.44	1.1405	110.38	110.12	111.26	-0.055084					146	40	5	0	0	0	0.8651	1	11993	11993		25.574	2.9944	1	9161800			19647	15208	13297	13307	22681	22681					0.05198416277949036
KDGLRTREPT	10	Unmodified	_KDGLRTREPT_					0	0	0		nc|ENSG00000204305|Q15109-9|AGER	nc|ENSG00000204305|Q15109-9|AGER	nc|ENSG00000204305|Q15109-9|AGER	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	586.8245239257812	2	586.822744	1171.63093	0.8875	0.00052081	1.1695	0.00068631	2.057	0.0012071	586.8232786075841	110.16	1.2371	110.24	110.08	111.32	0.073685					109	41	4	0	0	0	0.86218	1	11829	11829		32.812	1.2826	1	5645500			19648	15208	13297	13307	22682	22682					0.05198416277949036
KDGNGNVALK	10	Unmodified	_KDGNGNVALK_					0	0	0		nc|ENSG00000041515|Q9Y6X6|MYO16;ENSG00000041515|ENST00000457511|MYO16;nc|ENSG00000041515|Q9Y6X6-4|MYO16;ENST00000375857.6_1_13:109445985-109707944:+|nuORF;nc|ENSG00000041515|Q9Y6X6-3|MYO16;nc|ENSG00000041515|Q9Y6X6-2|MYO16	nc|ENSG00000041515|Q9Y6X6|MYO16	nc|ENSG00000041515|Q9Y6X6|MYO16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2810974121094	2	508.28018	1014.54581	-0.38512	-0.00019575	0.39831	0.00020245	0.013195	6.7066E-06	508.28029410514995	88.272	2.579	88.735	87.686	90.265	0.46312					198	63	4	0	0	0	0.86225	1	10517	10517		32.751	4.669	1	2008000			19649	932	13298	13308	22683	22683					0.03911670812124157
KDGSALCGNYG	11	Unmodified	_KDGSALCGNYG_					0	0	0			REV__nc|ENSG00000174516|Q8N2H9-2|PELI3	REV__nc|ENSG00000174516|Q8N2H9-2|PELI3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	542.739501953125	2	542.740031	1083.46551	0.82326	0.00044682	-0.84756	-0.00046001	-0.024301	-1.3189E-05	542.7395156697249	28.844	0.6699	28.825	28.523	29.193	-0.019405					47	21	3	0	0	0	0.72106	1	1433	1433		28.081	0.19925	1	85871	+		19650	30040	13299	13309	22684	22684					-0.07288558573236514
KDGSSNHVYNY	11	Unmodified	_KDGSSNHVYNY_					0	0	0		nc|ENSG00000106462|Q15910-3|EZH2;chr7:148829848-148846470|52|11.17|0.5|4.47|-|ENST00000350995|EZH2,EZH2;nc|ENSG00000106462|Q15910|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000492143.5_1_7:148504740-148513906:-|nuORF;nc|ENSG00000106462|Q15910-4|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	nc|ENSG00000106462|Q15910-3|EZH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.2868041992188	2	642.286191	1282.55783	0.027829	1.7874E-05	3.1686	0.0020351	3.1964	0.002053	642.2881398920545	53.127	0.68515	53.124	52.744	53.43	-0.0033035					43	19	3	0	0	0	0.59499	1	4654	4654		45.022	5.7694	1	407340			19651	495	13300	13310	22685	22685					-0.07214757235328761
KDGTGNPH	8	Unmodified	_KDGTGNPH_					0	0	0			REV__ENSG00000236334|ENST00000419275|PPIAL4G	REV__ENSG00000236334|ENST00000419275|PPIAL4G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1942138671875	2	413.196116	824.37768	-1.8302	-0.00075625	-4.0037	-0.0016543	-5.834	-0.0024106	413.19437338858427	78.719	2.8895	78.846	78.411	81.3	0.12695					158	87	2	0	0	0	0.89043	1	7420	7420		35.618	1.4457	1	956620	+		19652	23790	13301	13311	22686	22686					-0.0415339138166928
KDGTGWIA	8	Unmodified	_KDGTGWIA_					0	0	0		chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1;nc|ENSG00000147255|Q8N6C5-2|IGSF1;chrX:131289275-131299651|15|14.27|0.46|4.94|-|ENST00000370904|IGSF1,IGSF1;ENSG00000147255|ENST00000361420|IGSF1;nc|ENSG00000147255|Q8N6C5-4|IGSF1	chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1	chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	424.2185363769531	2	424.21906	846.423567	-0.98932	-0.00041969	0.0014772	6.2667E-07	-0.98784	-0.00041906	424.2189731189245	101.17	1.7059	101.17	100.51	102.21	0					61	40	2	0	0	0	0.87922	1	10295	10295		31.955	1.4512	1	607460			19653	542	13302	13312	22687	22687					-0.005787461994259502
KDGVFEAR	8	Unmodified	_KDGVFEAR_					0	0	0		ENSG00000185101|ENST00000332826|ANO9;nc|ENSG00000185101|A1A5B4-3|ANO9;ENST00000528927.5_1_11:431754-441926:-|nuORF	ENSG00000185101|ENST00000332826|ANO9	ENSG00000185101|ENST00000332826|ANO9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.7561950683594	2	461.243067	920.47158	-1.3841	-0.0006384	0.89842	0.00041439	-0.48567	-0.00022401	461.2436676843083	29.517	0.43367	29.487	29.257	29.691	-0.029207					15	9	3	0	0	0	0.4196	1	1871	1871		21.96	0	1	46346			19654	7679	13303	13313	22688	22688					0.008163277206108432
KDHFDPSH	8	Unmodified	_KDHFDPSH_					0	0	0			REV__ENSG00000170516|ENST00000355591|COX7B2	REV__ENSG00000170516|ENST00000355591|COX7B2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.72064208984375	2	491.722498	981.430444	0.33071	0.00016262	-4.2756	-0.0021024	-3.9449	-0.0019398	491.72029450634733	20.64	0.62511	20.181	19.915	20.54	-0.4591					23	14	2	0	0	0	0.90465	1	679	679		40.573	6.4001	1	132540	+		19655	21669	13304	13314	22689	22689					-0.06101433318860927
KDHIIYVKML	10	Unmodified	_KDHIIYVKML_					0	0	0		ENST00000396516.6_1_16:11859475-11861299:-|nuORF	ENST00000396516.6_1_16:11859475-11861299:-|nuORF	ENST00000396516.6_1_16:11859475-11861299:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.57427978515625	3	420.577531	1258.71076	-1.7821	-0.00074949	-3.4397	-0.0014467	-5.2218	-0.0021962	420.5759554237421	46.857	0.86356	46.857	46.491	47.355	0					56	24	4	0	0	0	0.86106	1	3593	3593		33.922	11.342	1	693050			19656	11119	13305	13315	22690	22690					0.09175766627572557
KDHLKKAVAEI	11	Unmodified	_KDHLKKAVAEI_					0	0	0		nc|ENSG00000171766|P50440-3|GATM;nc|ENSG00000171766|P50440-2|GATM;ENSG00000171766|ENST00000396659|GATM	nc|ENSG00000171766|P50440-3|GATM	nc|ENSG00000171766|P50440-3|GATM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.92218017578125	3	417.918834	1250.73467	4.0685	0.0017003	4.0974	0.0017124	8.1659	0.0034127	417.9204504044182	105.51	2.6111	105.69	104.89	107.5	0.18647					199	86	4	0	0	0	0.66929	1	12932	12932		38.714	14.482	1	601650			19657	6707	13306	13316	22691	22691					0.1193332338559685
KDHLVPKLGS	10	Unmodified	_KDHLVPKLGS_					0	0	0			REV__ENST00000344691.8_1_21:36259869-36260010:-|nuORF	REV__ENST00000344691.8_1_21:36259869-36260010:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3220825195312	2	547.321848	1092.62914	0.33238	0.00018192	-1.1785	-0.00064499	-0.84607	-0.00046307	547.3210832699908	22.76	1.7215	22.149	21.25	22.972	-0.6107					65	42	3	0	0	0	0.73395	1	959	959		42.864	2.0861	1	160500	+		19658	25303	13307	13317	22692	22692					0.0865340725997612
KDHPALKA	8	Unmodified	_KDHPALKA_					0	0	0		nc|ENSG00000148143|Q96JM2-3|ZNF462;ENSG00000148143|ENST00000277225|ZNF462;nc|ENSG00000148143|Q96JM2-2|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2550964355469	2	440.255977	878.497401	-0.13759	-6.0575E-05	-1.3498	-0.00059426	-1.4874	-0.00065483	440.25529250132934	77.261	1.0124	77.667	77.331	78.343	0.40531					46	24	3	0	0	0	0.89043	1	8783	8783		35.618	0.41757	1	694870			19659	4934	13308	13318	22693	22693					0.053292219628815474
KDHPDHELI	9	Unmodified	_KDHPDHELI_					0	0	0		nc|ENSG00000138036|Q8TCX1-3|DYNC2LI1;ENSG00000138036|ENST00000260605|DYNC2LI1	nc|ENSG00000138036|Q8TCX1-3|DYNC2LI1	nc|ENSG00000138036|Q8TCX1-3|DYNC2LI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.2798461914062	2	552.277638	1102.54072	-1.2435	-0.00068676	4.3941	0.0024268	3.1506	0.00174	552.2801437174752	62.246	1.5344	62.635	61.911	63.446	0.38846					64	34	4	0	0	0	0.41566	1	6653	6653		56.721	5.3856	1	395470			19660	4259	13309	13319	22694	22694					-0.0064463305047866015
KDIDKKSDI	9	Unmodified	_KDIDKKSDI_					0	0	0		nc|ENSG00000170801|P83110-2|HTRA3;ENSG00000170801|ENST00000307358|HTRA3	nc|ENSG00000170801|P83110-2|HTRA3	nc|ENSG00000170801|P83110-2|HTRA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.7823486328125	2	531.295496	1060.57644	-0.35687	-0.0001896	2.3757	0.0012622	2.0189	0.0010726	531.2959670697243	28.995	0.21815	28.965	28.822	29.04	-0.029209					6	4	2	0	0	0	0.20789	1	1789	1789		45.972	3.5761	1	39087			19661	6614	13310	13320	22695	22695					0.0485740440653899
KDIFRLFITI	10	Unmodified	_KDIFRLFITI_					0	0	0		ENSG00000039319|ENST00000505560|ZFYVE16;ENST00000512558.5_1_5:79729945-79747536:+|nuORF	ENSG00000039319|ENST00000505560|ZFYVE16	ENSG00000039319|ENST00000505560|ZFYVE16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.592529296875	3	422.592058	1264.75434	-1.6666	-0.00070429	4.3892	0.0018548	2.7226	0.0011505	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.8492	1	4713	4713		18.531	1.3643	1	771770			19662	922	13311	13321	22696	22696					0.13255699396358978
KDIFRLFITI	10	Unmodified	_KDIFRLFITI_					0	0	0		ENSG00000039319|ENST00000505560|ZFYVE16;ENST00000512558.5_1_5:79729945-79747536:+|nuORF	ENSG00000039319|ENST00000505560|ZFYVE16	ENSG00000039319|ENST00000505560|ZFYVE16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5934753417969	3	422.592058	1264.75434	-1.6042	-0.0006779	3.0911	0.0013063	1.487	0.00062839	422.5932334412356	58.895	1.2432	58.895	58.535	59.779	0					88	55	2	0	0	0	0.85259	1	5109	5109		20.03	0.7678	1	43831			19663	922	13311	13321	22697	22697					0.13255699396358978
KDIFRLFITI	10	Unmodified	_KDIFRLFITI_					0	0	0		ENSG00000039319|ENST00000505560|ZFYVE16;ENST00000512558.5_1_5:79729945-79747536:+|nuORF	ENSG00000039319|ENST00000505560|ZFYVE16	ENSG00000039319|ENST00000505560|ZFYVE16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.59259033203125	3	422.592058	1264.75434	1.8674	0.00078915	0.61077	0.00025811	2.4782	0.0010473	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.86151	1	4959	4959		15.333	0	1	997830			19664	922	13311	13321	22698	22698					0.13255699396358978
KDIINEILKR	10	Unmodified	_KDIINEILKR_					0	0	0		chr20:2465586-2465708|24|68.96|0.42|7.37|-|0|None,SNRPB|1	chr20:2465586-2465708|24|68.96|0.42|7.37|-|0|None,SNRPB|1	chr20:2465586-2465708|24|68.96|0.42|7.37|-|0|None,SNRPB|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.3837280273438	2	621.382437	1240.75032	0.85949	0.00053407	0.24028	0.00014931	1.0998	0.00068338	621.3825030626452	18.28	0.53683	17.658	17.447	17.983	-0.62141					28	11	4	0	0	0	0.79014	1	386	386		51.193	20.689	1	645220			19665	358	13312	13322	22699	22699					0.13957609902627155
KDIKASDIT	9	Unmodified	_KDIKASDIT_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7537536621094	2	495.776939	989.539325	1.0714	0.0005312	0.014443	7.1606E-06	1.0859	0.00053836	495.77698085227763	27.669	0.52335	27.414	27.152	27.676	-0.25465					18	11	2	0	0	0	0.19797	1	1609	1609		90.37	20.742	1	83358			19666	5333	13313	13323	22700	22700					0.044137328607348536
KDIKKTRK	8	Unmodified	_KDIKKTRK_					0	0	0		CON__Q9D312	CON__Q9D312	CON__Q9D312	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8074951171875	2	508.832383	1015.65021	-0.99854	-0.00050809	1.371	0.00069759	0.37242	0.0001895	509.3372700801342	43.443	0.27902	44.216	43.984	44.263	0.7738					8	5	2	0	0	0	0.4196	1	3949	3949		84.916	5.4645	1	1145400		+	19667	637	13314	13324	22701	22701					0.1430141735951338
KDIKVALPRSQ	11	Unmodified	_KDIKVALPRSQ_					0	0	0		nc|ENSG00000228970|P0CB48|UBTFL6	nc|ENSG00000228970|P0CB48|UBTFL6	nc|ENSG00000228970|P0CB48|UBTFL6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8833618164062	2	627.880062	1253.74557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.66	1	113.67	113.17	114.17	0.010185								0	0	0	0.56276	1	13719	13719		24.519	0	1				19668	15268	13315	13325	22702	22702					0.1288472575988635
KDILGGPI	8	Unmodified	_KDILGGPI_					0	0	0		nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000100731|Q96RV3-3|PCNX1;ENSG00000100731|ENST00000304743|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.92388916015625	2	406.747453	811.480354	-0.80018	-0.00032547	3.3909	0.0013792	2.5907	0.0010538	406.748737539513	40.585	1.613	40.977	39.624	41.237	0.39209					53	41	2	0	0	0	0.4196	1	3311	3311		10.866	0	1	421970			19669	1864	13316	13326	22703	22703					0.06707301357084816
KDILPPHQRR	10	Unmodified	_KDILPPHQRR_					0	0	0			REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|23|2|sense	REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|23|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.5752258300781	3	420.582556	1258.72584	-0.67396	-0.00028345	4.3176	0.0018159	3.6437	0.0015325	420.58429023983314	45.198	1.4494	46.094	45.037	46.486	0.89542					54	35	3	0	0	0	0.37624	1	4213	4213		28.577	14.491	1	300550	+		19670	29520	13317	13327	22704	22704					0.10682394539776396
KDIPKGSGNF	10	Unmodified	_KDIPKGSGNF_					0	0	0			REV__ENSG00000116039|ENST00000234396|ATP6V1B1	REV__ENSG00000116039|ENST00000234396|ATP6V1B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.7822875976562	2	531.782556	1061.55056	-0.45981	-0.00024452	0.04954	2.6344E-05	-0.41027	-0.00021817	531.7825831037422	29.277	2.7619	29.248	28.206	30.968	-0.029207					186	63	5	0	0	0	0.081281	4	1837	1825;1837;1849;1861		104.06	9.6384	1	10622000	+		19671	18174	13318	13328	22705;22706;22707;22708	22706					0.022245549549097632
KDIPKGSGNF	10	Unmodified	_KDIPKGSGNF_					0	0	0			REV__ENSG00000116039|ENST00000234396|ATP6V1B1	REV__ENSG00000116039|ENST00000234396|ATP6V1B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7821655273438	2	531.782556	1061.55056	0.46378	0.00024663	-1.044	-0.00055518	-0.58021	-0.00030855	531.7820031077274	29.432	2.4582	29.343	28.288	30.746	-0.089544					170	57	5	0	0	0	0.16557	3	1891	1867;1879;1891		93.143	7.9824	1	12586000	+		19672	18174	13318	13328	22709;22710;22711	22711					0.022245549549097632
KDIQLFHDG	9	Unmodified	_KDIQLFHDG_					0	0	0		ENST00000521548.5_1_8:28340871-28347759:-|nuORF	ENST00000521548.5_1_8:28340871-28347759:-|nuORF	ENST00000521548.5_1_8:28340871-28347759:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.796142578125	2	536.774731	1071.53491	-1.0396	-0.00055803	-1.4248	-0.00076482	-2.4644	-0.0013229	536.7736336597233	47.411	0.80766	47.883	47.388	48.196	0.4714					47	19	4	0	0	0	0.20789	1	4526	4526		39.253	7.723	1	1435600			19673	13173	13319	13329	22712	22712					0.0020026843783398363
KDIQYPFL	8	Unmodified	_KDIQYPFL_					0	0	0		nc|ENSG00000111300|Q14CX7-2|NAA25;ENST00000552527.5_1_12:112478245-112546577:-|nuORF;ENSG00000111300|ENST00000261745|NAA25	nc|ENSG00000111300|Q14CX7-2|NAA25	nc|ENSG00000111300|Q14CX7-2|NAA25	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.3792114257812	2	512.279118	1022.54368	0.39342	0.00020154	3.5894	0.0018388	3.9828	0.0020403	512.2808412619539	86.228	2.9223	86.672	85.865	88.787	0.44331					126	70	2	0	0	0	0.4196	1	9983	9983		35.201	0	1	345160			19674	2571	13320	13330	22713	22713					0.033312420743072835
KDIRELVTKNP	11	Unmodified	_KDIRELVTKNP_					0	0	0		ENSG00000109917|ENST00000227322|ZPR1	ENSG00000109917|ENST00000227322|ZPR1	ENSG00000109917|ENST00000227322|ZPR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2577209472656	3	438.257626	1311.75105	-0.33086	-0.000145	0.51274	0.00022471	0.18188	7.9711E-05	438.2577888562839	29.898	1.7233	29.855	29.533	31.256	-0.043093					114	42	4	0	0	0	0.72892	1	1610	1610		26.75	0.68632	1	610700			19675	2491	13321	13331	22714	22714					0.10764404551696316
KDIRELVTKNP	11	Unmodified	_KDIRELVTKNP_					0	0	0		ENSG00000109917|ENST00000227322|ZPR1	ENSG00000109917|ENST00000227322|ZPR1	ENSG00000109917|ENST00000227322|ZPR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.25714111328125	3	438.257626	1311.75105	-1.5943	-0.00069873	1.7641	0.00077311	0.16972	7.4382E-05	438.2583289789849	29.969	0.70984	30.036	29.73	30.44	0.066727					92	32	4	0	0	0	0.73647	1	1316	1316		25.068	2.5062	1	499410			19676	2491	13321	13331	22715	22715					0.10764404551696316
KDISKIAAD	9	Unmodified	_KDISKIAAD_					0	0	0		ENSG00000143669|ENST00000389793|LYST;ENST00000473037.5_1_1:235826242-235897989:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.76947021484375	2	480.771657	959.528761	-1.1927	-0.00057344	0.90264	0.00043396	-0.29011	-0.00013948	480.7719026747457	41.087	0.70248	41.046	40.786	41.489	-0.04081					37	19	3	0	0	0	0.3164	1	3052	3052		63.534	0	1	473220			19677	4656	13322	13332	22716	22716					0.04737750206322744
KDIVNLYR	8	Unmodified	_KDIVNLYR_					0	0	0		ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.79400634765625	2	510.795466	1019.57638	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.397	1	26.14	25.64	26.64	-0.2572								0	0	0	0.30811	1	1442	1442		45.952	3.0877	1				19678	8162	13323	13333	22717	22717					0.06737449197169099
KDIVPQNSN	9	Unmodified	_KDIVPQNSN_					0	0	0		nc|ENSG00000132972|Q9BXT8-4|RNF17;ENSG00000132972|ENST00000255324|RNF17;nc|ENSG00000132972|Q9BXT8-1|RNF17;nc|ENSG00000132972|Q9BXT8-5|RNF17	nc|ENSG00000132972|Q9BXT8-4|RNF17	nc|ENSG00000132972|Q9BXT8-4|RNF17	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7982177734375	2	507.764363	1013.51417	0.05229	2.6551E-05	3.747	0.0019026	3.7993	0.0019291	507.76609915641427	50.823	0.5693	50.821	50.522	51.092	-0.0020447					25	19	2	0	0	0	0.20789	1	4285	4285		18.262	0	1	73736			19679	3847	13324	13334	22718	22718					0.007956780581821477
KDKERERGEK	10	Unmodified	_KDKERERGEK_					0	0	0		ENSG00000100281|ENST00000216106|HMGXB4;ENST00000418170.5_1_22:35660034-35689641:+|nuORF	ENSG00000100281|ENST00000216106|HMGXB4	ENSG00000100281|ENST00000216106|HMGXB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.8450317382812	2	637.844207	1273.67386	1.438	0.00091722	0.65823	0.00041985	2.0962	0.0013371	637.8446527464371	43.773	1.3238	43.781	43.309	44.632	0.0084534					84	31	4	0	0	0	0.12134	3	3036	3036;3048;3059		98.582	18.888	1	2342900			19680	1818	13325	13335	22719;22720;22721	22719					0.047971863353723165
KDKERERGEK	10	Unmodified	_KDKERERGEK_					0	0	0		ENSG00000100281|ENST00000216106|HMGXB4;ENST00000418170.5_1_22:35660034-35689641:+|nuORF	ENSG00000100281|ENST00000216106|HMGXB4	ENSG00000100281|ENST00000216106|HMGXB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	637.84521484375	2	637.844207	1273.67386	0.42263	0.00026957	1.7145	0.0010936	2.1371	0.0013632	637.8452388757121	43.672	1.1051	43.729	43.397	44.503	0.056744					60	26	3	0	0	0	0.2953	1	3037	3037		72.879	3.2516	1	2414200			19681	1818	13325	13335	22722	22722					0.047971863353723165
KDKERERGEK	10	Unmodified	_KDKERERGEK_					0	0	0		ENSG00000100281|ENST00000216106|HMGXB4;ENST00000418170.5_1_22:35660034-35689641:+|nuORF	ENSG00000100281|ENST00000216106|HMGXB4	ENSG00000100281|ENST00000216106|HMGXB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	637.8456420898438	2	637.844207	1273.67386	0.40796	0.00026022	1.6489	0.0010517	2.0568	0.0013119	637.8451725799487	43.684	1.2213	43.633	43.352	44.573	-0.051186					65	29	3	0	0	0	0.12134	5	3003	3003;3014;3026;3038;3048		98.582	26.029	1	2487300			19682	1818	13325	13335	22723;22724;22725;22726;22727	22723					0.047971863353723165
KDKFRCKWFVV	11	Unmodified	_KDKFRCKWFVV_					0	0	0			REV__ENST00000269445.10_1_18:46956775-46987052:-|nuORF	REV__ENST00000269445.10_1_18:46956775-46987052:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	485.2870788574219	3	485.93583	1454.78566	0.52444	0.00025485	-1.576	-0.00076583	-1.0515	-0.00051098	486.26951094582586	26.589	0.08214	26.617	26.553	26.636	0.028172					4	2	2	0	0	0	0.17784	1	1019	1019		12.433	0	1	17162	+		19683	24525	13326	13336	22728	22728					0.07645949158791154
KDKGIGIL	8	Unmodified	_KDKGIGIL_					0	0	0		nc|ENSG00000180068|P47883|OR3A4P	nc|ENSG00000180068|P47883|OR3A4P	nc|ENSG00000180068|P47883|OR3A4P	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.23089599609375	2	422.268553	842.522553	1.1913	0.00050303	-0.76993	-0.00032512	0.42133	0.00017792	422.2681759700815	33.751	0.4965	34.056	33.745	34.241	0.30494					20	11	2	0	0	0	0.4196	1	2441	2441		8.8223	0	1	153260			19684	15128	13327	13337	22729	22729					0.0949927676548441
KDKGIGIL	8	Unmodified	_KDKGIGIL_					0	0	0		nc|ENSG00000180068|P47883|OR3A4P	nc|ENSG00000180068|P47883|OR3A4P	nc|ENSG00000180068|P47883|OR3A4P	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	422.268553	842.522553	0.9895	0.00041784	-0.51432	-0.00021718	0.47518	0.00020065	422.2682951328609	33.752	0.49863	33.922	33.653	34.151	0.16971	-0.067197	0.00012239	NaN	8.8223	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164400			19685	15128	13327	13337							0.0949927676548441
KDKGLLGKV	9	Unmodified	_KDKGLLGKV_					0	0	0		nc|ENSG00000117868|A0FGR8-5|ESYT2;ENST00000435514.3_1_7:158526900-158536411:-|nuORF;ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3077697753906	2	479.30821	956.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.629	1	40.598	40.098	41.098	-0.030991								0	0	0	0.33699	1	2908	2908		18.262	0.79408	1				19686	3004	13328	13338	22730	22730					0.12182923719603878
KDKIIVVP	8	Unmodified	_KDKIIVVP_					0	0	0		nc|ENSG00000137177|Q9H1H9-3|KIF13A;nc|ENSG00000137177|Q9H1H9-4|KIF13A;nc|ENSG00000137177|Q9H1H9-2|KIF13A;ENSG00000137177|ENST00000259711|KIF13A	nc|ENSG00000137177|Q9H1H9-3|KIF13A	nc|ENSG00000137177|Q9H1H9-3|KIF13A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3009948730469	2	456.299853	910.585153	-0.76777	-0.00035033	3.2946	0.0015033	2.5268	0.001153	456.30128506086476	48.129	1.2211	48.104	47.704	48.926	-0.025116					68	30	3	0	0	0	0.89962	1	4070	4070		38.806	5.2906	1	255900			19687	4176	13329	13339	22731	22731					0.1262842283365444
KDKIIVVP	8	Unmodified	_KDKIIVVP_					0	0	0		nc|ENSG00000137177|Q9H1H9-3|KIF13A;nc|ENSG00000137177|Q9H1H9-4|KIF13A;nc|ENSG00000137177|Q9H1H9-2|KIF13A;ENSG00000137177|ENST00000259711|KIF13A	nc|ENSG00000137177|Q9H1H9-3|KIF13A	nc|ENSG00000137177|Q9H1H9-3|KIF13A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3019714355469	2	456.299853	910.585153	0.2873	0.0001311	2.3096	0.0010538	2.5969	0.0011849	456.30080462463604	48.151	1.3839	48.189	47.742	49.126	0.037735					72	38	3	0	0	0	0.87922	1	3629	3629		31.955	2.8053	1	274320			19688	4176	13329	13339	22732	22732					0.1262842283365444
KDKITTRTL	9	Unmodified	_KDKITTRTL_					0	0	0		chr17:38760608-38764119|62|14.71|0.77|4.26|+|1|PSMB3,PSMB3|1;ENSG00000277791|ENST00000619426|PSMB3	chr17:38760608-38764119|62|14.71|0.77|4.26|+|1|PSMB3,PSMB3|1	chr17:38760608-38764119|62|14.71|0.77|4.26|+|1|PSMB3,PSMB3|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3267822265625	2	538.327131	1074.63971	0.070633	3.8024E-05	-0.68681	-0.00036973	-0.61617	-0.0003317	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.76764	1	10917	10917		34.173	1.3601	1	109840000			19689	224	13330	13340	22733	22733					0.10537389914429696
KDKIVTLE	8	Unmodified	_KDKIVTLE_					0	0	0			REV__nc|ENSG00000159409|Q5SZQ8-4|CELF3	REV__nc|ENSG00000159409|Q5SZQ8-4|CELF3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.8221435546875	2	473.2844	944.554247	0.07659	3.6249E-05	1.1388	0.00053899	1.2154	0.00057524	473.28484516534934	38.105	0.6817	38.077	37.733	38.415	-0.027843					20	15	2	0	0	0	0.4196	1	2542	2542		26.693	0	1	30365	+		19690	20660	13331	13341	22734	22734					0.07975224728761532
KDKKLGLRK	9	Unmodified	_KDKKLGLRK_					0	0	0		ENST00000484374.1_1_9:17135063-17166975:+|nuORF	ENST00000484374.1_1_9:17135063-17166975:+|nuORF	ENST00000484374.1_1_9:17135063-17166975:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.361083984375	2	543.361308	1084.70806	0.017512	9.5154E-06	-0.068067	-3.6985E-05	-0.050555	-2.747E-05	543.3611508149596	17.785	0.53657	17.302	17.115	17.652	-0.48256					23	11	4	0	0	0	0.44421	1	299	299		54.776	0.053964	1	548200			19691	12536	13332	13342	22735	22735					0.1690967928493592
KDKKLIKAL	9	Unmodified	_KDKKLIKAL_					0	0	0		ENST00000524317.1_1_11:9042594-9047435:-|nuORF;ENST00000518447.1_1_11:9042594-9043530:-|nuORF;nc|ENSG00000175356|Q9NQ36-3|SCUBE2;nc|ENSG00000175356|Q9NQ36-2|SCUBE2;ENSG00000159307|ENST00000360835|SCUBE1;nc|ENSG00000175356|Q9NQ36|SCUBE2;ENSG00000175356|ENST00000649792|SCUBE2	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.8651733398438	2	528.860609	1055.70667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.65	1	117.73	117.23	118.23	0.087753								0	0	0	0.36184	1	12445	12445		6.7355	0	1				19692	13215	13333	13343	22736	22736					0.1810404519619624
KDKKLKEI	8	Unmodified	_KDKKLKEI_					0	0	0		nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11	nc|ENSG00000133392|P35749-4|MYH11	nc|ENSG00000133392|P35749-4|MYH11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.968017578125	2	501.321317	1000.62808	1.3409	0.00067223	-1.7862	-0.00089544	-0.44523	-0.0002232	501.3202613034666	33.873	0.53551	34.178	33.953	34.488	0.30495					32	12	4	0	0	0	0.4196	1	2479	2479		18.324	0	1	664460			19693	14928	13334	13344	22737	22737					0.1277919289109377
KDKLKRKEKK	10	Unmodified	_KDKLKRKEKK_					0	0	0			REV__ENSG00000168916|ENST00000513986|ZNF608	REV__ENSG00000168916|ENST00000513986|ZNF608	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.28778076171875	3	434.285628	1299.83505	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.915	1	57.915	57.415	58.415	0								0	0	0	0.45132	1	4999	4999		23.378	4.1152	1		+		19694	21532	13335	13345	22738	22738					0.19712980439248895
KDKLPGAR	8	Unmodified	_KDKLPGAR_					0	0	0		ENSG00000037965|ENST00000040584|HOXC8	ENSG00000037965|ENST00000040584|HOXC8	ENSG00000037965|ENST00000040584|HOXC8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78790283203125	2	442.769252	883.52395	0.19299	8.545E-05	-2.2702	-0.0010052	-2.0772	-0.00091971	442.76774272250185	39.708	0.18908	39.797	39.652	39.841	0.088375					8	4	2	0	0	0	0.4196	1	2446	2446		14.137	3.8719	1	47795			19695	911	13336	13346	22739	22739					0.07752910854219408
KDKLPGAR	8	Unmodified	_KDKLPGAR_					0	0	0		ENSG00000037965|ENST00000040584|HOXC8	ENSG00000037965|ENST00000040584|HOXC8	ENSG00000037965|ENST00000040584|HOXC8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7880859375	2	442.769252	883.52395	-0.08536	-3.7795E-05	-0.51255	-0.00022694	-0.59791	-0.00026474	442.77010135528684	39.854	0.32457	39.806	39.608	39.932	-0.04789					10	7	2	0	0	0	0.4196	1	2466	2466		19.997	0	1	35029			19696	911	13336	13346	22740	22740					0.07752910854219408
KDKLTISFLV	10	Unmodified	_KDKLTISFLV_					0	0	0			REV__ENSG00000099338|ENST00000409235|CATSPERG	REV__ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3558959960938	2	582.355357	1162.69616	0.16989	9.8934E-05	-3.1776	-0.0018505	-3.0077	-0.0017515	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.86272	1	12530	12530		24.519	0.31644	1	635410	+		19697	17093	13337	13347	22741	22741					0.1213201775105972
KDKLTLKTN	9	Unmodified	_KDKLTLKTN_					0	0	0			REV__ENSG00000256977|ENST00000480744|LIMS3	REV__ENSG00000256977|ENST00000480744|LIMS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8204956054688	2	530.821681	1059.62881	-0.047896	-2.5424E-05	-1.0165	-0.0005396	-1.0644	-0.00056502	530.8209770202351	79.275	0.97966	79.825	79.318	80.298	0.54945					57	22	3	0	0	0	0.44529	1	9138	9138		54.722	10.345	1	876930	+		19698	23910	13338	13348	22742	22742					0.10137987540133508
KDKNKMNKVQ	10	Unmodified	_KDKNKMNKVQ_					0	0	0			REV__ENSG00000023839|ENST00000647814|ABCC2	REV__ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.5643005371094	3	411.564173	1231.67069	0.12386	5.0976E-05	0.69599	0.00028644	0.81985	0.00033742	411.56447022986043	18.92	0.55983	18.29	18.06	18.62	-0.62961					32	12	4	0	0	0	0.57305	1	450	450		51.528	0	1	348630	+		19699	16253	13339	13349	22743	22743					0.06412219956996523
KDKNKMNKVQ	10	Unmodified	_KDKNKMNKVQ_					0	0	0			REV__ENSG00000023839|ENST00000647814|ABCC2	REV__ENSG00000023839|ENST00000647814|ABCC2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	411.564173	1231.67069	1.4449	0.00059468	-0.22908	-9.4281E-05	1.2158	0.0005004	411.56397549775096	18.737	0.52581	18.26	18.03	18.556	-0.47694	-0.014812	-0.00059509	NaN	51.528	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	315510	+		19700	16253	13339	13349							0.06412219956996523
KDKNRAKGDK	10	Unmodified	_KDKNRAKGDK_					0	0	0			REV__ENSG00000101868|ENST00000379068|POLA1	REV__ENSG00000101868|ENST00000379068|POLA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.3331298828125	2	580.330736	1158.64692	0.57993	0.00033655	2.6626	0.0015452	3.2426	0.0018818	580.33221961555	39.911	0.8952	39.917	39.495	40.39	0.0065002					58	22	4	0	0	0	0.54701	1	2489	2489		52.937	1.6012	1	1007900	+		19701	17307	13340	13350	22744	22744					0.0739412251482463
KDKNSFPFFA	10	Unmodified	_KDKNSFPFFA_					0	0	0		nc|ENSG00000164327|Q6R327-3|RICTOR;ENSG00000164327|ENST00000357387|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	601.3145141601562	2	600.806031	1199.59751	0.94972	0.0005706	-1.1591	-0.00069638	-0.20936	-0.00012579	600.8052218415454	50.444	0.57443	50.892	50.557	51.131	0.44761					29	13	3	0	0	0	0.37624	1	4917	4917		10.265	0	1	667360			19702	15058	13341	13351	22745	22745					0.005694145060488154
KDKNSFPFFA	10	Unmodified	_KDKNSFPFFA_					0	0	0		nc|ENSG00000164327|Q6R327-3|RICTOR;ENSG00000164327|ENST00000357387|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	600.806031	1199.59751	0.74312	0.00044647	-0.66717	-0.00040084	0.07595	4.5631E-05	600.8056436253611	50.3	0.56869	51.145	50.809	51.377	0.84501	0.1265	0.0003894	NaN	15.642	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	716620			19703	15058	13341	13351							0.005694145060488154
KDKPMDEK	8	Unmodified	_KDKPMDEK_					0	0	0			REV__ENSG00000196812|ENST00000340487|ZSCAN16	REV__ENSG00000196812|ENST00000340487|ZSCAN16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7530517578125	2	495.749867	989.485181	1.1342	0.0005623	2.4383	0.0012088	3.5725	0.0017711	495.75303545632914	27.534	0.90796	27.28	26.989	27.897	-0.25465					56	20	4	0	0	0	0.42407	1	1595	1595		79.451	5.196	1	451180	+		19704	23175	13342	13352	22746	22746					-0.009981825624549856
KDKRKGFG	8	Unmodified	_KDKRKGFG_					0	0	0			REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.27545166015625	2	468.274701	934.534849	-0.32916	-0.00015414	0.16652	7.7978E-05	-0.16264	-7.6159E-05	468.27462230664014	17.097	0.41941	17.017	16.801	17.221	-0.079056					30	15	3	0	0	0	0.79403	1	176	176		63.306	11.971	1	133730	+		19705	26851	13343	13353	22747	22747					0.06496313228524286
KDKRKGFG	8	Unmodified	_KDKRKGFG_					0	0	0			REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.2735290527344	2	468.274701	934.534849	-0.18913	-8.8564E-05	-0.15071	-7.0574E-05	-0.33984	-0.00015914	468.27448593009586	17.515	0.58294	16.904	16.613	17.196	-0.6107					33	13	3	0	0	0	0.92457	1	266	266		47.916	9.1095	1	151560	+		19706	26851	13343	13353	22748	22748					0.06496313228524286
KDKRKGFG	8	Unmodified	_KDKRKGFG_					0	0	0			REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	468.274701	934.534849	-2.0881	-0.00097778	1.8822	0.00088138	-0.20587	-9.6403E-05	468.2753445658491	17.062	0.36622	17.062	16.861	17.228	0	0.080551	0.0015468	NaN	63.306	37	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121570	+		19707	26851	13343	13353							0.06496313228524286
KDKRKGFG	8	Unmodified	_KDKRKGFG_					0	0	0			REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	468.274701	934.534849	-0.32916	-0.00015414	0.16652	7.7978E-05	-0.16264	-7.6159E-05	468.27462230664014	17.097	0.41941	17.017	16.801	17.221	-0.079056	0.036354	-6.0042E-05	NaN	63.306	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133730	+		19708	26851	13343	13353							0.06496313228524286
KDKRKGFG	8	Unmodified	_KDKRKGFG_					0	0	0			REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	468.274701	934.534849	-1.1147	-0.00052197	1.0102	0.00047304	-0.10449	-4.893E-05	468.27497448153696	16.92	0.34635	16.965	16.765	17.112	0.0457	-0.015668	0.00073008	NaN	63.306	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	151070	+		19709	26851	13343	13353							0.06496313228524286
KDKRKGFG	8	Unmodified	_KDKRKGFG_					0	0	0			REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	468.274701	934.534849	0.050523	2.3659E-05	0.20651	9.6701E-05	0.25703	0.00012036	468.2746577987822	16.897	0.38967	16.957	16.748	17.138	0.059269	-0.02456	-2.2596E-05	NaN	63.306	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173570	+		19710	26851	13343	13353							0.06496313228524286
KDKRKGFG	8	Unmodified	_KDKRKGFG_					0	0	0			REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	468.274701	934.534849	0.66697	0.00031232	-0.91438	-0.00042818	-0.24741	-0.00011586	468.274167711035	17.022	0.38138	16.998	16.826	17.207	-0.024035	0.016821	-0.0010724	NaN	63.306	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183480	+		19711	26851	13343	13353							0.06496313228524286
KDKRKGFG	8	Unmodified	_KDKRKGFG_					0	0	0			REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	468.274701	934.534849	0.28311	0.00013258	-0.59176	-0.00027711	-0.30865	-0.00014453	468.2742336304524	17.454	0.4307	16.972	16.761	17.192	-0.48256	-0.0092953	-0.00077021	NaN	63.306	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165050	+		19712	26851	13343	13353							0.06496313228524286
KDKRKGFG	8	Unmodified	_KDKRKGFG_					0	0	0			REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	468.274701	934.534849	-0.18913	-8.8564E-05	-0.15071	-7.0574E-05	-0.33984	-0.00015914	468.27448593009586	17.515	0.58294	16.904	16.613	17.196	-0.6107	-0.07723	-0.00035715	NaN	63.306	33	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	151560	+		19713	26851	13343	13353							0.06496313228524286
KDKTSVAVKT	10	Unmodified	_KDKTSVAVKT_					0	0	0		ENSG00000151422|ENST00000281092|FER;ENST00000505323.1_1_5:108260361-108380497:+|nuORF;nc|ENSG00000151422|P16591-3|FER;nc|ENSG00000151422|P16591-2|FER	ENSG00000151422|ENST00000281092|FER	ENSG00000151422|ENST00000281092|FER	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8184814453125	2	538.819138	1075.62372	0.25822	0.00013913	-0.28726	-0.00015478	-0.029038	-1.5646E-05	538.8189412926413	18.022	0.37173	17.54	17.42	17.791	-0.48204					18	7	3	0	0	0	0.86587	1	350	350		29.17	1.2878	1	171470			19714	5116	13344	13354	22749	22749					0.08893683677524677
KDKYLVGIFKL	11	Unmodified	_KDKYLVGIFKL_					0	0	0			REV__nc|ENSG00000182541|P53671-2|LIMK2	REV__nc|ENSG00000182541|P53671-2|LIMK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.9405517578125	3	441.939346	1322.79621	0.63201	0.00027931	0.44307	0.00019581	1.0751	0.00047512	441.93938161315157	55.264	1.2271	55.292	54.682	55.909	0.027142					77	31	3	0	0	0	0.75457	1	4895	4895		21.032	1.7696	1	422510	+		19715	22531	13345	13355	22750	22750					0.1477225508488118
KDLAQEIAY	9	Unmodified	_KDLAQEIAY_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7421875	2	525.776939	1049.53933	0.14768	7.7649E-05	-1.627	-0.00085542	-1.4793	-0.00077777	525.7762226428678	74.934	0.57272	75.499	75.208	75.781	0.56458					30	13	3	0	0	0	0.20789	1	8505	8505		34.173	0	1	440610	+		19716	18069	13346	13356	22751	22751					0.016537328607682866
KDLATGLVQ	9	Unmodified	_KDLATGLVQ_					0	0	0			REV__nc|ENSG00000187609|Q8N9H8-3|EXD3	REV__nc|ENSG00000187609|Q8N9H8-3|EXD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.7743835449219	2	472.7742	943.533846	-0.13618	-6.4381E-05	1.7563	0.00083035	1.6202	0.00076597	472.7741354171197	22.959	0.93172	22.375	21.851	22.782	-0.58348					48	22	4	0	0	0	0.29259	1	986	986		65.465	1.9315	1	487620	+		19717	22927	13347	13357	22752	22752					0.05982054068954312
KDLATHVK	8	Unmodified	_KDLATHVK_					0	0	0			REV__chr8:134565152-134565333|13|11.31|0.51|4.48|-|ENST00000523243|ZFAT,ZFAT	REV__chr8:134565152-134565333|13|11.31|0.51|4.48|-|ENST00000523243|ZFAT,ZFAT	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7926940917969	2	456.269084	910.523616	-1.2599	-0.00057488	-1.7534	-0.00080002	-3.0133	-0.0013749	456.26877338762654	38.025	0.15387	38.041	37.956	38.11	0.016563					6	4	2	0	0	0	0.4196	1	2219	2219		19.104	0	1	23904	+		19718	15918	13348	13358	22753	22753					0.06477491134376123
KDLAYELDTVL	11	Unmodified	_KDLAYELDTVL_					0	0	0			REV__nc|ENSG00000116698|Q92540-4|SMG7	REV__nc|ENSG00000116698|Q92540-4|SMG7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3460693359375	2	640.342643	1278.67073	1.7833	0.0011419	4.2444	0.0027178	6.0276	0.0038598	640.3453874628556	103.41	0.76866	103.63	103.42	104.19	0.22556					52	18	4	0	0	0	0.59499	1	12592	12592		45.022	2.6261	1	7100500	+		19719	29796	13349	13359	22754	22754					0.04254498437967413
KDLEDSTLRNI	11	Unmodified	_KDLEDSTLRNI_					0	0	0		ENSG00000166130|ENST00000299157|IKBIP	ENSG00000166130|ENST00000299157|IKBIP	ENSG00000166130|ENST00000299157|IKBIP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801513671875	3	435.233258	1302.67794	0.47036	0.00020472	-0.12404	-5.3986E-05	0.34632	0.00015073	435.2331122005994	33.919	0.4987	34.129	33.82	34.319	0.21003					14	11	2	0	0	0	0.17272	1	2503	2503		25.892	4.1113	1	102420			19720	6158	13350	13360	22755	22755					0.03871231038442602
KDLHRKIHRII	11	Unmodified	_KDLHRKIHRII_					0	0	0		ENST00000466828.5_1_10:105642444-105658073:-|nuORF;ENSG00000107960|ENST00000224950|STN1	ENST00000466828.5_1_10:105642444-105658073:-|nuORF	ENST00000466828.5_1_10:105642444-105658073:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	476.9696960449219	3	476.968522	1427.88374	-0.21223	-0.00010123	0.083789	3.9965E-05	-0.12844	-6.1261E-05	476.96842507827137	28.239	0.87933	28.142	27.663	28.542	-0.096947					40	20	3	0	0	0	0.7896	1	1702	1702		13.508	1.0751	1	127690			19721	2384	13351	13361	22756	22756					0.18690893798998331
KDLILPKISDP	11	Unmodified	_KDLILPKISDP_					0	0	0		ENSG00000155252|ENST00000370631|PI4K2A	ENSG00000155252|ENST00000370631|PI4K2A	ENSG00000155252|ENST00000370631|PI4K2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8694458007812	2	619.871371	1237.72819	0.5439	0.00033715	-3.7831	-0.002345	-3.2392	-0.0020079	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.638	1	11125	11125		40.058	2.2467	1	1280900			19722	5316	13352	13362	22757	22757					0.11883385434202864
KDLIYKMVQ	9	Unmodified	_KDLIYKMVQ_					0	0	0			REV__nc|ENSG00000171634|Q12830-4|BPTF	REV__nc|ENSG00000171634|Q12830-4|BPTF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.8040771484375	2	569.32046	1136.62637	3.0766	0.0017516	0.29477	0.00016782	3.3714	0.0019194	569.3209064208176	25.078	0.30716	24.642	24.494	24.802	-0.43567					10	6	2	0	0	0	0.20789	1	1276	1276		25.574	0	1	33564	+		19723	21757	13353	13363	22758	22758					0.06351815810808148
KDLKATISH	9	Unmodified	_KDLKATISH_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.7932434082031	2	506.792924	1011.57129	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.025	1	33.195	32.695	33.695	0.16971								0	0	0	0.082209	1	2350	2350		79.713	6.8333	1				19724	4728	13354	13364	22759	22759					0.06597145334569632
KDLKDFLH	8	Unmodified	_KDLKDFLH_					0	0	0		nc|ENSG00000115841|Q96LZ7-2|RMDN2	nc|ENSG00000115841|Q96LZ7-2|RMDN2	nc|ENSG00000115841|Q96LZ7-2|RMDN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2794494628906	2	508.282192	1014.54983	0.029362	1.4924E-05	-4.2974	-0.0021843	-4.268	-0.0021694	508.2799882081312	26.317	1.2518	26.059	25.682	26.934	-0.2572					83	27	5	0	0	0	0.73851	1	1414	1414		65.803	5.5092	1	2089700			19725	14859	13355	13365	22760	22760					0.04313760305831238
KDLKERNK	8	Unmodified	_KDLKERNK_					0	0	0			REV__ENST00000510488.1_1_3:141189685-141190057:-|nuORF	REV__ENST00000510488.1_1_3:141189685-141190057:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.803955078125	2	515.803823	1029.59309	0.78398	0.00040438	-0.88024	-0.00045403	-0.096256	-4.9649E-05	515.8032269783904	23.016	0.76294	22.442	22.157	22.92	-0.57415					45	18	4	0	0	0	0.89679	1	1015	1015		37.812	0.30334	1	679090	+		19726	27954	13356	13366	22761	22761					0.07947950083121214
KDLKNRVVE	9	Unmodified	_KDLKNRVVE_					0	0	0		ENSG00000197170|ENST00000356126|PSMD12;nc|ENSG00000197170|O00232-2|PSMD12	ENSG00000197170|ENST00000356126|PSMD12	ENSG00000197170|ENST00000356126|PSMD12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.3090209960938	2	550.824755	1099.63496	-1.668	-0.0009188	3.4531	0.0019021	1.7851	0.00098328	550.8267861031065	30.161	0.53061	30.19	29.92	30.45	0.028618					21	11	2	0	0	0	0.20789	1	1924	1924		5.5578	0	1	59971			19727	8145	13357	13367	22762	22762					0.0891250577167284
KDLKPIGNW	9	Unmodified	_KDLKPIGNW_					0	0	0			REV__ENSG00000180113|ENST00000316081|TDRD6	REV__ENSG00000180113|ENST00000316081|TDRD6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2670288085938	2	535.803291	1069.59203	0.11723	6.2812E-05	-0.20581	-0.00011027	-0.088581	-4.7462E-05	535.8029618928505	25.96	0.56581	25.703	25.424	25.99	-0.2572					27	12	3	0	0	0	0.20789	1	1351	1351		56.721	36.724	1	76368	+		19728	22378	13358	13368	22763	22763					0.06001735714221468
KDLLVIHLFSK	11	Unmodified	_KDLLVIHLFSK_					0	0	0			REV__ENST00000586135.1_2_18:34773574-34802187:+|nuORF	REV__ENST00000586135.1_2_18:34773574-34802187:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.9039611816406	3	438.271096	1311.79146	1.3523	0.00059268	3.9269	0.001721	5.2792	0.0023137	438.2727497787415	34.031	0.61888	34.336	33.994	34.613	0.30494					36	14	3	0	0	0	0.17244	1	2543	2543		19.627	4.2938	1	213580	+		19729	29099	13359	13369	22764	22764					0.14803370942127003
KDLLYLTH	8	Unmodified	_KDLLYLTH_					0	0	0			REV__ENSG00000116221|ENST00000360840|MRPL37	REV__ENSG00000116221|ENST00000360840|MRPL37	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.787109375	2	501.784567	1001.55458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.038	1	36.32	35.82	36.82	0.28173								0	0	0	0.29755	1	2801	2801		24.203	2.5004	1		+		19730	18191	13360	13370	22765	22765					0.05386644448606148
KDLNQRQAH	9	Unmodified	_KDLNQRQAH_					0	0	0		ENSG00000105248|ENST00000262962|YJU2	ENSG00000105248|ENST00000262962|YJU2	ENSG00000105248|ENST00000262962|YJU2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.2850952148438	2	555.294153	1108.57375	-0.74556	-0.000414	3.2717	0.0018167	2.5261	0.0014027	555.2957350619272	45.799	0.39646	46.695	46.447	46.843	0.89542					24	9	3	0	0	0	0.20789	1	4267	4267		25.574	0	1	307700			19731	2194	13361	13371	22766	22766					0.023809937922123936
KDLPCHQITML	11	Carbamidomethyl (C)	_KDLPC(Carbamidomethyl (C))HQITML_	KDLPC(1)HQITML		KDLPC(49)HQITML		0	1	0			REV__nc|ENSG00000177693|Q96R69|OR4F4	REV__nc|ENSG00000177693|Q96R69|OR4F4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.5651550292969	3	452.565186	1354.67373	0.2003	9.0647E-05	-0.01683	-7.6166E-06	0.18347	8.303E-05	452.56515226637106	18.527	1.0431	17.905	17.631	18.674	-0.62141					57	23	4	0	0	0	0.53461	1	401	401		49.466	6.0473	1	840520	+		19732	22225	13362	13372	22767	22767	270				0.010577270194971788
KDLPEHAVL	9	Unmodified	_KDLPEHAVL_					0	0	0		ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.2862548828125	2	511.287474	1020.5604	0.36299	0.00018559	-1.6305	-0.00083365	-1.2675	-0.00064806	511.28657650841876	42.002	2.0595	41.971	41.461	43.521	-0.030987					111	49	5	0	0	0	0.24527	1	3145	3145		69.628	0.8408	1	6140800			19733	5219	13363	13373	22768	22768					0.05093742960275449
KDLPEHAVL	9	Unmodified	_KDLPEHAVL_					0	0	0		ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2854309082031	2	511.287474	1020.5604	-0.92708	-0.000474	-0.33784	-0.00017274	-1.2649	-0.00064674	511.2872429876972	41.91	2.375	41.872	41.45	43.825	-0.038223					133	56	5	0	0	0	0.36616	1	3155	3155		60.118	3.3972	1	7049200			19734	5219	13363	13373	22769	22769					0.05093742960275449
KDLPEILL	8	Unmodified	_KDLPEILL_					0	0	0			REV__nc|ENSG00000149782|Q01970-2|PLCB3	REV__nc|ENSG00000149782|Q01970-2|PLCB3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7884826660156	2	470.789318	939.564084	-1.7868	-0.00084119	3.031	0.001427	1.2443	0.00058579	470.7906139736521	40.476	1.2312	40.476	39.584	40.815	0					64	34	2	0	0	0	0.86288	1	2654	2654		26.796	0	1	120330	+		19735	20194	13364	13374	22770	22770					0.09188412734147278
KDLPLRAAE	9	Unmodified	_KDLPLRAAE_					0	0	0		nc|ENSG00000137727|Q9P2F6-4|ARHGAP20;nc|ENSG00000137727|Q9P2F6-2|ARHGAP20;nc|ENSG00000137727|Q9P2F6-3|ARHGAP20;ENSG00000137727|ENST00000683387|ARHGAP20	nc|ENSG00000137727|Q9P2F6-4|ARHGAP20	nc|ENSG00000137727|Q9P2F6-4|ARHGAP20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.7935485839844	2	506.792924	1011.57129	1.1761	0.00059605	-1.0238	-0.00051885	0.15232	7.7196E-05	506.792269724159	31.321	0.55494	31.325	31.101	31.656	0.0037212					30	12	3	0	0	0	0.41984	1	2134	2134		56.434	14.038	1	347300			19736	4230	13365	13375	22771	22771					0.06597145334558263
KDLQKMKEIA	10	Unmodified	_KDLQKMKEIA_					0	0	0			REV__ENST00000495735.5_1_10:99212613-99216645:+|nuORF	REV__ENST00000495735.5_1_10:99212613-99216645:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.2529602050781	3	401.897041	1202.66929	0.012698	5.1033E-06	-4.3546	-0.0017501	-4.3419	-0.001745	402.2298043754398	19.557	0.15369	19.627	19.527	19.681	0.070711					11	7	2	0	0	0	0.37624	1	430	430		19.263	0	1	35480	+		19737	21723	13366	13376	22772	22772					0.07606585868256843
KDLQPSHS	8	Unmodified	_KDLQPSHS_					0	0	0		ENSG00000114933|ENST00000403263|INO80D	ENSG00000114933|ENST00000403263|INO80D	ENSG00000114933|ENST00000403263|INO80D	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.2575988769531	2	456.232699	910.450845	-0.2962	-0.00013514	0.25335	0.00011559	-0.04285	-1.955E-05	456.2327230912014	29.181	0.35928	29.138	28.901	29.26	-0.043095					17	13	2	0	0	0	0.4196	1	1512	1512		10.265	0	1	12575			19738	2799	13367	13377	22773	22773					-0.007962626590483524
KDLQSLSFL	9	Unmodified	_KDLQSLSFL_					0	0	0			REV__ENSG00000177646|ENST00000308982|ACAD9	REV__ENSG00000177646|ENST00000308982|ACAD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.30517578125	2	525.795132	1049.57571	-0.041019	-2.1568E-05	-0.38244	-0.00020108	-0.42345	-0.00022265	525.7948668544304	59.059	0.58398	59.045	58.809	59.393	-0.013729					30	17	2	0	0	0	0.33718	1	5393	5393		62.107	0	1	161250	+		19739	22221	13368	13378	22774	22774					0.05290609757457787
KDLRHTKMLS	10	Unmodified	_KDLRHTKMLS_					0	0	0			REV__nc|ENSG00000186866|Q9Y2G5-2|POFUT2	REV__nc|ENSG00000186866|Q9Y2G5-2|POFUT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	615.4057006835938	2	614.845165	1227.67578	0.41305	0.00025396	-1.8378	-0.0011299	-1.4247	-0.00087597	615.3449994284391	65.999	0.1846	66.552	66.486	66.671	0.5526					6	4	2	0	0	0	0.37624	1	7198	7198		18.262	4.125	1	276100	+		19740	22885	13369	13379	22775	22775					0.07104523819634778
KDLRKELNK	9	Unmodified	_KDLRKELNK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|104|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|104|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.3195190429688	2	572.345855	1142.67716	0.49037	0.00028066	0.34517	0.00019756	0.83554	0.00047822	572.3513413269559	17.065	0.26148	16.455	16.305	16.567	-0.6107					15	5	4	0	0	0	0.7932	1	201	201		25.574	0	1	72640	+		19741	29606	13370	13380	22776	22776					0.11152481180033647
KDLVKYQNS	9	Unmodified	_KDLVKYQNS_					0	0	0		ENSG00000129534|ENST00000310806|MIS18BP1;nc|ENSG00000129534|Q6P0N0-2|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.7986450195312	2	547.795663	1093.57677	-1.6542	-0.00090618	4.0166	0.0022003	2.3624	0.0012941	547.7976809863761	58.833	0.41879	59.225	58.899	59.318	0.39209					29	9	4	0	0	0	0.2083	1	6178	6178		72.879	3.2516	1	872330			19742	3593	13371	13381	22777	22777					0.03372824126358864
KDLVKYQNS	9	Unmodified	_KDLVKYQNS_					0	0	0		ENSG00000129534|ENST00000310806|MIS18BP1;nc|ENSG00000129534|Q6P0N0-2|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.8004760742188	2	547.795663	1093.57677	-0.19199	-0.00010517	2.7525	0.0015078	2.5605	0.0014026	547.797148834683	58.683	0.46307	59.236	58.88	59.343	0.55323					16	10	2	0	0	0	0.25415	1	6170	6170		68.846	3.3808	1	880420			19743	3593	13371	13381	22778	22778					0.03372824126358864
KDMEKLIGSF	10	Unmodified	_KDMEKLIGSF_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.4096069335938	2	584.307549	1166.60055	-0.49984	-0.00029206	0.74178	0.00043343	0.24194	0.00014137	584.3078866997809	67.938	1.8864	68.486	67.983	69.869	0.54819					68	44	2	0	0	0	0.37624	1	7666	7666		26.693	5.0072	1	280200	+		19744	23882	13372	13382	22779	22779					0.023909215685534946
KDMEKLIGSF	10	Unmodified	_KDMEKLIGSF_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	584.307549	1166.60055	-0.32956	-0.00019257	0.22007	0.00012859	-0.10949	-6.3978E-05	584.3076498246655	67.88	2.316	68.264	67.493	69.809	0.38482	-0.11076	-0.00030714	NaN	26.693	88	56	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272020	+		19745	23882	13372	13382							0.023909215685534946
KDMKFVSH	8	Unmodified	_KDMKFVSH_					0	0	0		ENSG00000142185|ENST00000397928|TRPM2;nc|ENSG00000142185|O94759-2|TRPM2;nc|ENSG00000142185|O94759-3|TRPM2	ENSG00000142185|ENST00000397928|TRPM2	ENSG00000142185|ENST00000397928|TRPM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7530517578125	2	496.25512	990.495686	1.2317	0.00061123	1.6079	0.00079795	2.8396	0.0014092	496.2557569515564	27.468	0.2928	27.213	26.989	27.282	-0.25465					10	6	2	0	0	0	0.4196	1	1595	1595		66.429	0.53182	1	159770			19746	4547	13373	13383	22780	22780					5.8448826393942E-05
KDNNGHPYVVP	11	Unmodified	_KDNNGHPYVVP_					0	0	0			REV__ENST00000335281.8_1_14:52433988-52434075:+|nuORF	REV__ENST00000335281.8_1_14:52433988-52434075:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.332275390625	2	620.309469	1238.60439	-0.69809	-0.00043303	0.91787	0.00056936	0.21978	0.00013633	620.8120977603724	58.292	0.2478	58.684	58.609	58.857	0.39209					6	5	2	0	0	0	0.17384	1	6097	6097		33.922	0	1	72332	+		19747	25166	13374	13384	22781	22781					-0.005372726134055483
KDNPRLRK	8	Unmodified	_KDNPRLRK_					0	0	0		nc|ENSG00000264058|Q8N1A0-2|KRT222;ENSG00000213424|ENST00000394052|KRT222;CON__Q8N1A0	nc|ENSG00000264058|Q8N1A0-2|KRT222	nc|ENSG00000264058|Q8N1A0-2|KRT222	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8086547851562	2	513.811982	1025.60941	-1.4174	-0.00072826	-4.4658	-0.0022946	-5.8832	-0.0030229	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.87479	1	4140	4140		30.504	1.3541	1	1977600		+	19748	632	13375	13385	22782	22782					0.09763076039894258
KDNTFVEVL	9	Unmodified	_KDNTFVEVL_					0	0	0			REV__nc|ENSG00000166783|Q9Y4F3-3|MARF1	REV__nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.7869873046875	2	532.784764	1063.55498	2.1313	0.0011355	2.0441	0.0010891	4.1754	0.0022246	532.7856327070612	100.68	0.64594	101.02	100.69	101.34	0.3459					36	15	4	0	0	0	0.58668	1	12232	12232		47.657	5.2612	1	654150	+		19749	21317	13376	13386	22783	22783					0.025740193777892273
KDNTIIRLKSR	11	Unmodified	_KDNTIIRLKSR_					0	0	0		nc|ENSG00000051825|Q99550-2|MPHOSPH9;ENSG00000051825|ENST00000606320|MPHOSPH9	nc|ENSG00000051825|Q99550-2|MPHOSPH9	nc|ENSG00000051825|Q99550-2|MPHOSPH9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.944091796875	3	448.60877	1342.80448	-0.12449	-5.5849E-05	1.3955	0.00062604	1.271	0.00057019	448.94365307156517	77.124	0.95989	77.076	76.709	77.669	-0.048264					104	45	3	0	0	0	0.69071	2	7667	7667;7671		33.039	2.9003	1	533170			19750	1002	13377	13387	22784;22785	22784					0.14679202054185225
KDNTIIRLKSR	11	Unmodified	_KDNTIIRLKSR_					0	0	0		nc|ENSG00000051825|Q99550-2|MPHOSPH9;ENSG00000051825|ENST00000606320|MPHOSPH9	nc|ENSG00000051825|Q99550-2|MPHOSPH9	nc|ENSG00000051825|Q99550-2|MPHOSPH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.60882568359375	3	448.60877	1342.80448	-1.3262	-0.00059493	2.6509	0.0011892	1.3248	0.00059431	448.6097359452046	75.096	1.0894	75.184	74.756	75.846	0.087631					82	27	5	0	0	0	0.77205	1	6947	6947		17.167	1.8336	1	417120			19751	1002	13377	13387	22786	22786					0.14679202054185225
KDNTIIRLKSR	11	Unmodified	_KDNTIIRLKSR_					0	0	0		nc|ENSG00000051825|Q99550-2|MPHOSPH9;ENSG00000051825|ENST00000606320|MPHOSPH9	nc|ENSG00000051825|Q99550-2|MPHOSPH9	nc|ENSG00000051825|Q99550-2|MPHOSPH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.60955810546875	3	448.60877	1342.80448	-1.3856	-0.00062161	2.5639	0.0011502	1.1783	0.00052859	448.609746420413	76.801	0.97182	76.89	76.464	77.435	0.089363					88	45	3	0	0	0	0.72892	1	7185	7185		26.75	3.3718	1	651130			19752	1002	13377	13387	22787	22787					0.14679202054185225
KDNVLIQH	8	Unmodified	_KDNVLIQH_					0	0	0		nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;ENSG00000074964|ENST00000361221|ARHGEF10L	nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L	nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23284912109375	2	483.771991	965.529429	0.44702	0.00021626	-0.93916	-0.00045434	-0.49214	-0.00023808	483.77113583999835	23.282	0.31032	22.708	22.436	22.747	-0.57415					10	7	2	0	0	0	0.4196	1	1001	1001		21.96	0	1	21940			19753	1317	13378	13388	22788	22788					0.04528589646054115
KDPDKFQFG	9	Unmodified	_KDPDKFQFG_					0	0	0		ENSG00000167306|ENST00000285039|MYO5B	ENSG00000167306|ENST00000285039|MYO5B	ENSG00000167306|ENST00000285039|MYO5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.269287109375	2	541.269281	1080.52401	0.023956	1.2967E-05	-0.76362	-0.00041332	-0.73967	-0.00040036	541.2688842326893	16.611	0.49285	16.124	15.959	16.452	-0.48718					16	10	2	0	0	0	0.78536	1	156	156		29.15	2.4566	1	180420			19754	6286	13379	13389	22789	22789					-0.01303133936426093
KDPHKEVVRSA	11	Unmodified	_KDPHKEVVRSA_					0	0	0		nc|ENSG00000163539|O75122|CLASP2;ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2	nc|ENSG00000163539|O75122|CLASP2	nc|ENSG00000163539|O75122|CLASP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2058410644531	3	422.570204	1264.68878	-0.32085	-0.00013558	0.42312	0.0001788	0.10227	4.3216E-05	422.5708324246957	28.244	0.45528	28.147	27.885	28.34	-0.096945					14	10	2	0	0	0	0.17363	1	1697	1697		31.068	3.4242	1	21583			19755	5821	13380	13390	22790	22790					0.0670267820337358
KDPKRAME	8	Oxidation (M)	_KDPKRAM(Oxidation (M))E_		KDPKRAM(1)E		KDPKRAM(85)E	0	0	1		ENSG00000160505|ENST00000301295|NLRP4;nc|ENSG00000160505|Q96MN2-2|NLRP4;nc|ENSG00000160505|Q96MN2-3|NLRP4	ENSG00000160505|ENST00000301295|NLRP4	ENSG00000160505|ENST00000301295|NLRP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.7537536621094	2	495.755484	989.496415	-0.93026	-0.00046118	-2.0905	-0.0010364	-3.0207	-0.0014976	495.75408621645647	27.435	0.70149	27.259	27.016	27.717	-0.17559					24	15	3	0	0	0	0.36305	1	1579	1579		84.916	10.66	1	501870			19756	5591	13381	13391	22791	22791		98			0.0012463953169117303
KDPLRLKCVK	10	Unmodified	_KDPLRLKCVK_					0	0	0		nc|ENSG00000187391|Q86UL8-2|MAGI2;ENSG00000187391|ENST00000354212|MAGI2	nc|ENSG00000187391|Q86UL8-2|MAGI2	nc|ENSG00000187391|Q86UL8-2|MAGI2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.58074951171875	3	400.581276	1198.722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.48	1	114.54	114.04	115.04	0.061073								0	0	0	0.45132	1	12237	12237		18.262	0.42894	1				19757	7853	13382	13392	22792	22792					0.1305858872169665
KDPLVKALQLL	11	Unmodified	_KDPLVKALQLL_					0	0	0		ENSG00000169291|ENST00000304760|SHE	ENSG00000169291|ENST00000304760|SHE	ENSG00000169291|ENST00000304760|SHE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2673034667969	3	413.267463	1236.78056	0.1219	5.0377E-05	1.2528	0.00051772	1.3747	0.0005681	413.2672502915767	40.321	1.5114	40.29	39.321	40.833	-0.030987					67	39	3	0	0	0	0.72374	1	2739	2739		27.644	3.1247	1	243080			19758	6485	13383	13393	22793	22793					0.17163968567842858
KDPNPIPIISA	11	Unmodified	_KDPNPIPIISA_					0	0	0			REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|66|2|sense	REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|66|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.8326416015625	2	582.834788	1163.65502	0.82789	0.00048252	-4.392	-0.0025598	-3.5641	-0.0020773	582.8322150120989	94.225	3.555	94.386	93.365	96.92	0.16119					184	84	3	0	0	0	0.72739	1	9629	9629		27.047	0.98393	1	780120	+		19759	29491	13384	13394	22794	22794					0.07974256711622729
KDPPPFQL	8	Unmodified	_KDPPPFQL_					0	0	0			REV__nc|ENSG00000168824|P42857-2|NSG1	REV__nc|ENSG00000168824|P42857-2|NSG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2554626464844	2	471.258185	940.501818	-0.36059	-0.00016993	-4.2737	-0.002014	-4.6343	-0.002184	471.2561536641347	29.907	2.3297	29.817	29.233	31.563	-0.089546					133	53	5	0	0	0	0.77771	1	2008	2008		64.207	18.255	1	8235200	+		19760	21524	13385	13395	22795	22795					0.029186863857944445
KDPPQGYF	8	Unmodified	_KDPPQGYF_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.22918701171875	2	476.232168	950.449782	0.55317	0.00026344	-4.488	-0.0021373	-3.9348	-0.0018739	476.22993026029525	24.888	0.52721	24.902	24.645	25.172	0.013996					44	25	2	0	0	0	0.93293	1	868	868		51.335	10.557	1	121280			19761	7804	13386	13396	22796	22796					-0.02742477027948098
KDPSRGKASAD	11	Unmodified	_KDPSRGKASAD_					0	0	0		nc|ENSG00000159788|O14924-5|RGS12;nc|ENSG00000159788|O14924-4|RGS12;ENSG00000159788|ENST00000336727|RGS12;nc|ENSG00000159788|O14924-7|RGS12;nc|ENSG00000159788|O14924-6|RGS12;ENST00000508158.5_1_4:3386893-3430067:+|nuORF;nc|ENSG00000159788|O14924-2|RGS12;nc|ENSG00000159788|O14924-3|RGS12	nc|ENSG00000159788|O14924-5|RGS12	nc|ENSG00000159788|O14924-5|RGS12	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	566.2919311523438	2	566.291276	1130.568	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.01	1	114.01	113.51	114.51	0								0	0	0	0.56276	1	11764	11764		28.081	2.5074	1				19762	5548	13387	13397	22797	22797					0.007938504899129839
KDQFLRAAP	9	Unmodified	_KDQFLRAAP_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2766723632812	2	523.293091	1044.57163	0.90524	0.0004737	-2.295	-0.001201	-1.3898	-0.00072728	523.7927857913681	25.209	0.53382	24.881	24.613	25.147	-0.32825					19	11	2	0	0	0	0.20789	1	1249	1249		30.504	14.862	1	63015			19763	5511	13388	13398	22798	22798					0.05112565054423612
KDQLQKRRHI	10	Unmodified	_KDQLQKRRHI_					0	0	0		ENST00000422653.1_1_9:88371036-88385349:+|nuORF	ENST00000422653.1_1_9:88371036-88385349:+|nuORF	ENST00000422653.1_1_9:88371036-88385349:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7879943847656	3	441.265227	1320.77385	-0.24339	-0.0001074	2.6203	0.0011563	2.377	0.0010489	441.26622304848246	38.341	0.56778	38.864	38.553	39.121	0.52236					23	13	2	0	0	0	0.37624	1	3163	3163		30.569	6.337	1	185070			19764	11483	13389	13399	22799	22799					0.1262946845984061
KDQPKRLL	8	Unmodified	_KDQPKRLL_					0	0	0			REV__ENSG00000181392|ENST00000324444|SYNE4	REV__ENSG00000181392|ENST00000324444|SYNE4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.3113708496094	2	499.311284	996.608014	0.73158	0.00036529	-0.81843	-0.00040865	-0.086849	-4.3365E-05	499.3107238652696	32.392	0.55627	32.499	32.232	32.788	0.10707					25	12	3	0	0	0	0.88944	1	2289	2289		57.811	0	1	273470	+		19765	22456	13390	13400	22800	22800					0.1095744195114321
KDQRGSPAY	9	Unmodified	_KDQRGSPAY_					0	0	0		nc|ENSG00000196182|Q8N2I9-3|STK40;ENSG00000196182|ENST00000373132|STK40;nc|ENSG00000196182|Q8N2I9-4|STK40	nc|ENSG00000196182|Q8N2I9-3|STK40	nc|ENSG00000196182|Q8N2I9-3|STK40	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.7705078125	2	511.256705	1020.49886	1.0774	0.00055083	2.4507	0.0012529	3.5281	0.0018037	511.2579012342545	51.638	0.41417	52.305	52.021	52.436	0.6673					16	9	2	0	0	0	0.20789	1	5135	5135		25.574	1.3713	1	145460			19766	8023	13391	13401	22801	22801					-0.010571887390028678
KDQSKVRPLSG	11	Unmodified	_KDQSKVRPLSG_					0	0	0		ENST00000542946.1_1_11:61135370-61135625:+|nuORF;nc|ENSG00000149483|Q9NPI0-3|TMEM138;ENST00000507563.6_1_11:61131784-61135625:+|nuORF	ENST00000542946.1_1_11:61135370-61135625:+|nuORF	ENST00000542946.1_1_11:61135370-61135625:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.8983459472656	3	405.566571	1213.67788	-1.8641	-0.000756	-3.3109	-0.0013428	-5.175	-0.0020988	405.56510136906576	61.167	0.87137	61.268	60.446	61.317	0.10082					82	40	3	0	0	0	0.74002	1	5316	5316		24.276	1.7143	1	1002300			19767	12960	13392	13402	22802	22802					0.0795927582908007
KDQTKRKKALP	11	Unmodified	_KDQTKRKKALP_					0	0	0			REV__nc|ENSG00000186487|Q9UL68-4|MYT1L	REV__nc|ENSG00000186487|Q9UL68-4|MYT1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2575988769531	3	438.273499	1311.79867	-1.2021	-0.00052686	1.2962	0.0005681	0.094106	4.1244E-05	438.27431056423427	29.698	0.30245	29.726	29.531	29.833	0.028618					9	6	2	0	0	0	0.17334	1	1885	1885		21.78	0	1	55389	+		19768	22858	13393	13403	22803	22803					0.1552410354256608
KDREDYVPY	9	Unmodified	_KDREDYVPY_					0	0	0		ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	592.974609375	2	592.782753	1183.55095	0.24074	0.00014271	-0.053033	-3.1437E-05	0.18771	0.00011127	592.7827008861874	54.695	0.87789	55.102	54.657	55.535	0.40663					32	15	3	0	0	0	0.20789	1	5573	5573		24.519	0	1	461300			19769	4304	13394	13404	22804	22804					-0.03348070115907831
KDRERAQGERL	11	Unmodified	_KDRERAQGERL_					0	0	0			REV__ENSG00000100302|ENST00000216127|RASD2	REV__ENSG00000100302|ENST00000216127|RASD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.24981689453125	3	453.248013	1356.72221	0.66325	0.00030061	2.3507	0.0010654	3.0139	0.001366	453.24905718399623	23.771	1.0969	23.827	23.444	24.541	0.055487					76	30	3	0	0	0	0.74002	1	797	797		24.276	0.04411	1	185360	+		19770	17166	13395	13405	22805	22805					0.058116799752724546
KDRFNHFSL	9	Unmodified	_KDRFNHFSL_					0	0	0		ENST00000589504.1_1_19:34856171-34859700:+|nuORF;ENSG00000105220|ENST00000356487|GPI;nc|ENSG00000105220|P06744-2|GPI	ENST00000589504.1_1_19:34856171-34859700:+|nuORF	ENST00000589504.1_1_19:34856171-34859700:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3541259765625	2	582.301447	1162.58834	-0.28516	-0.00016605	-0.98321	-0.00057252	-1.2684	-0.00073857	582.3003004680077	103.67	0.23401	103.67	103.6	103.84	0					6	5	2	0	0	0	0.20789	1	10635	10635		24.519	4.5224	1	135070			19771	2191	13396	13406	22806	22806					0.013550659403790632
KDRHKLVS	8	Unmodified	_KDRHKLVS_					0	0	0		nc|ENSG00000120071|Q7Z3B3-4|KANSL1;ENST00000576870.5_2_17:44108844-44117263:-|nuORF;nc|ENSG00000120071|Q7Z3B3-2|KANSL1;ENST00000572218.5_2_17:44108844-44117263:-|nuORF;ENSG00000120071|ENST00000432791|KANSL1;ENST00000573286.2_2_17:44116960-44117263:-|nuORF	nc|ENSG00000120071|Q7Z3B3-4|KANSL1	nc|ENSG00000120071|Q7Z3B3-4|KANSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7940673828125	2	491.793258	981.571963	0.13478	6.6286E-05	4.4765	0.0022015	4.6113	0.0022678	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.87479	1	5631	5631		30.504	1.3541	1	176030			19772	3113	13397	13407	22807	22807					0.08043984774280943
KDRHTGPVY	9	Unmodified	_KDRHTGPVY_					0	0	0		nc|ENSG00000147724|Q49AJ0-2|FAM135B;ENST00000482951.6_1_8:139144838-139379577:-|nuORF;ENSG00000147724|ENST00000395297|FAM135B	nc|ENSG00000147724|Q49AJ0-2|FAM135B	nc|ENSG00000147724|Q49AJ0-2|FAM135B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.2538452148438	2	536.780348	1071.54614	-0.23494	-0.00012611	-1.228	-0.00065916	-1.4629	-0.00078527	536.779253081132	79.454	0.55317	79.87	79.614	80.168	0.41621					20	12	2	0	0	0	0.20789	1	9090	9090		15.642	4.7763	1	102710			19773	4921	13398	13408	22808	22808					0.013230905320142483
KDRLTLVTVKH	11	Unmodified	_KDRLTLVTVKH_					0	0	0			REV__ENST00000420734.1_1_1:87510839-87511187:-|nuORF	REV__ENST00000420734.1_1_1:87510839-87511187:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26776123046875	3	437.269866	1308.78777	-1.0895	-0.00047642	-3.583	-0.0015667	-4.6725	-0.0020431	437.2682076309449	48.376	1.4718	48.845	48.119	49.591	0.46941					123	36	4	0	0	0	0.72374	1	4627	4627		27.644	5.8635	1	3096400	+		19774	26491	13399	13409	22809	22809					0.14572701168253843
KDRPDWTPWRP	11	Unmodified	_KDRPDWTPWRP_					0	0	0			REV__ENST00000510260.5_1_1:22985966-22987332:+|nuORF	REV__ENST00000510260.5_1_1:22985966-22987332:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.78607177734375	3	485.249354	1452.72623	0.02375	1.1525E-05	-3.201	-0.0015533	-3.1773	-0.0015418	485.2475444693515	31.13	0.25934	31.133	30.928	31.187	0.0037212					7	5	2	0	0	0	0.17705	1	2098	2098		15.337	0	1	27422	+		19775	27949	13400	13410	22810	22810					0.017977694689761847
KDRSLHLLLVL	11	Unmodified	_KDRSLHLLLVL_					0	0	0			REV__ENST00000452853.6_1_3:149683261-149683384:-|nuORF	REV__ENST00000452853.6_1_3:149683261-149683384:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2655334472656	3	436.278362	1305.81326	0.46303	0.00020201	-3.1328	-0.0013668	-2.6698	-0.0011648	436.2780482746412	23.863	0.11193	23.865	23.785	23.897	0.0018959					5	4	2	0	0	0	0.1745	1	773	773		8.7993	0	1	28668	+		19776	26905	13401	13411	22811	22811					0.17258175690699318
KDRVREKE	8	Unmodified	_KDRVREKE_					0	0	0			REV__ENST00000395499.5_1_6:32144447-32144495:-|nuORF	REV__ENST00000395499.5_1_6:32144447-32144495:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2709350585938	2	530.298904	1058.58326	-0.69257	-0.00036727	2.5152	0.0013338	1.8226	0.00096655	530.2996371474765	46.045	0.23927	46.941	46.843	47.083	0.89542					7	5	2	0	0	0	0.4196	1	4340	4340		29.15	1.2673	1	124340	+		19777	26112	13402	13412	22812	22812					0.05630762077748841
KDSKIPISIKH	11	Unmodified	_KDSKIPISIKH_					0	0	0		ENSG00000165566|ENST00000515384|AMER2;nc|ENSG00000165566|Q8N7J2-2|AMER2	ENSG00000165566|ENST00000515384|AMER2	ENSG00000165566|ENST00000515384|AMER2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3832397460938	2	633.382437	1264.75032	1.3848	0.00087709	3.182	0.0020154	4.5668	0.0028925	633.3842375425138	51.028	1.3794	51.063	50.434	51.813	0.034588					70	42	3	0	0	0	0.73237	1	4077	4077		28.577	1.5294	1	117580			19778	6096	13403	13413	22813	22813					0.12853609902640528
KDSLLVKAPPL	11	Unmodified	_KDSLLVKAPPL_					0	0	0			REV__nc|ENSG00000155729|Q6PI47-3|KCTD18	REV__nc|ENSG00000155729|Q6PI47-3|KCTD18	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8666381835938	2	590.868631	1179.72271	-0.23931	-0.0001414	-3.2253	-0.0019057	-3.4646	-0.0020471	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.64498	1	10741	10741		39.253	6.4404	1	39787000	+		19779	20441	13404	13414	22814	22814					0.14003706642415636
KDSLQNQLI	9	Unmodified	_KDSLQNQLI_					0	0	0		ENSG00000143850|ENST00000272203|PLEKHA6	ENSG00000143850|ENST00000272203|PLEKHA6	ENSG00000143850|ENST00000272203|PLEKHA6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.2996826171875	2	529.795663	1057.57677	-0.38946	-0.00020633	-4.149	-0.0021981	-4.5384	-0.0024044	530.2943369878815	58.886	0.21081	59.279	59.107	59.318	0.39209					5	4	2	0	0	0	0.20789	1	6165	6165		23.523	0	1	51686			19780	4668	13405	13415	22815	22815					0.05028824126384279
KDSNLDGFA	9	Unmodified	_KDSNLDGFA_					0	0	0			REV__ENSG00000129636|ENST00000320640|ITFG1	REV__ENSG00000129636|ENST00000320640|ITFG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7286071777344	2	483.729989	965.445425	-0.38753	-0.00018746	-2.2221	-0.0010749	-2.6096	-0.0012623	483.72871360991206	72.116	0.82655	72.666	72.154	72.981	0.55008					51	19	4	0	0	0	0.64922	1	8072	8072		44.117	5.3107	1	1356300	+		19781	18827	13406	13416	22816	22816					-0.038679862415278876
KDSRGSVALI	10	Unmodified	_KDSRGSVALI_					0	0	0		nc|ENSG00000291104|Q96KV6|BTN2A3P;ENST00000465856.5_1_6:26422331-26423690:+|nuORF	nc|ENSG00000291104|Q96KV6|BTN2A3P	nc|ENSG00000291104|Q96KV6|BTN2A3P	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3033447265625	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.8545	2	8865	8803;8865		36.447	2.5251	1	9288900			19782	15346	13407	13417	22817;22818	22818					0.07224530363305348
KDSRGSVALI	10	Unmodified	_KDSRGSVALI_					0	0	0		nc|ENSG00000291104|Q96KV6|BTN2A3P;ENST00000465856.5_1_6:26422331-26423690:+|nuORF	nc|ENSG00000291104|Q96KV6|BTN2A3P	nc|ENSG00000291104|Q96KV6|BTN2A3P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3035278320312	2	523.303655	1044.59276	-0.041206	-2.1563E-05	-0.13765	-7.2034E-05	-0.17886	-9.3597E-05	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.86348	2	8998	8998;9274		31.53	1.2121	1	12431000			19783	15346	13407	13417	22819;22820	22819					0.07224530363305348
KDSRGSVALI	10	Unmodified	_KDSRGSVALI_					0	0	0		nc|ENSG00000291104|Q96KV6|BTN2A3P;ENST00000465856.5_1_6:26422331-26423690:+|nuORF	nc|ENSG00000291104|Q96KV6|BTN2A3P	nc|ENSG00000291104|Q96KV6|BTN2A3P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3038940429688	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.86471	1	9630	9630		30.318	0	1	13080000			19784	15346	13407	13417	22821	22821					0.07224530363305348
KDSRGSVALI	10	Unmodified	_KDSRGSVALI_					0	0	0		nc|ENSG00000291104|Q96KV6|BTN2A3P;ENST00000465856.5_1_6:26422331-26423690:+|nuORF	nc|ENSG00000291104|Q96KV6|BTN2A3P	nc|ENSG00000291104|Q96KV6|BTN2A3P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3031616210938	2	523.303655	1044.59276	1.0264	0.00053713	-1.3248	-0.00069329	-0.29841	-0.00015616	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.80179	1	8795	8795		39.253	3.6345	1	3817300			19785	15346	13407	13417	22822	22822					0.07224530363305348
KDSRGSVALI	10	Unmodified	_KDSRGSVALI_					0	0	0		nc|ENSG00000291104|Q96KV6|BTN2A3P;ENST00000465856.5_1_6:26422331-26423690:+|nuORF	nc|ENSG00000291104|Q96KV6|BTN2A3P	nc|ENSG00000291104|Q96KV6|BTN2A3P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3031005859375	2	523.303655	1044.59276	0.69703	0.00036476	-1.0638	-0.00055667	-0.36673	-0.00019191	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.86348	2	8487	8487;8570		31.53	2.3803	1	3801600			19786	15346	13407	13417	22823;22824	22823					0.07224530363305348
KDSRGSVALI	10	Unmodified	_KDSRGSVALI_					0	0	0		nc|ENSG00000291104|Q96KV6|BTN2A3P;ENST00000465856.5_1_6:26422331-26423690:+|nuORF	nc|ENSG00000291104|Q96KV6|BTN2A3P	nc|ENSG00000291104|Q96KV6|BTN2A3P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3035278320312	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.86348	1	8798	8798		31.53	1.0262	1	13442000			19787	15346	13407	13417	22825	22825					0.07224530363305348
KDSRGSVALI	10	Unmodified	_KDSRGSVALI_					0	0	0		nc|ENSG00000291104|Q96KV6|BTN2A3P;ENST00000465856.5_1_6:26422331-26423690:+|nuORF	nc|ENSG00000291104|Q96KV6|BTN2A3P	nc|ENSG00000291104|Q96KV6|BTN2A3P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035278320312	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.8545	1	8944	8944		36.447	0	1	12189000			19788	15346	13407	13417	22826	22826					0.07224530363305348
KDSTAVAKK	9	Unmodified	_KDSTAVAKK_					0	0	0			REV__nc|ENSG00000119397|Q7Z7A1-5|CNTRL	REV__nc|ENSG00000119397|Q7Z7A1-5|CNTRL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2795715332031	2	474.279649	946.544745	-0.50275	-0.00023844	0.6535	0.00030994	0.15075	7.1499E-05	474.27966942901975	15.95	0.17459	15.351	15.248	15.422	-0.59873					5	3	2	0	0	0	0.64555	1	72	72		44.377	3.599	1	46120	+		19789	18351	13408	13418	22827	22827					0.06933456443232444
KDSTGHLSL	9	Unmodified	_KDSTGHLSL_					0	0	0		ENSG00000161896|ENST00000293756|IP6K3	ENSG00000161896|ENST00000293756|IP6K3	ENSG00000161896|ENST00000293756|IP6K3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9747619628906	2	479.253631	956.49271	-1.6688	-0.00079978	1.4782	0.00070843	-0.19061	-9.135E-05	479.2542662366474	45.163	0.34949	45.159	44.881	45.23	-0.0041618					10	7	2	0	0	0	0.20789	1	3568	3568		14.137	0	1	54672			19790	5658	13409	13419	22828	22828					0.012722930294785328
KDSVLNIAR	9	Unmodified	_KDSVLNIAR_					0	0	0		nc|ENSG00000174501|Q5JPF3|ANKRD36C;ENSG00000174501|ENST00000295246|ANKRD36C;nc|ENSG00000174501|Q5JPF3-3|ANKRD36C;ENST00000534304.5_1_2:96525807-96601268:-|nuORF;ENSG00000135976|ENST00000420699|ANKRD36	nc|ENSG00000174501|Q5JPF3|ANKRD36C	nc|ENSG00000174501|Q5JPF3|ANKRD36C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.29803466796875	2	508.298373	1014.58219	0.94658	0.00048115	-1.0956	-0.00055691	-0.14905	-7.5763E-05	508.2975110475495	30.244	0.69923	30.154	29.917	30.616	-0.089544					37	15	3	0	0	0	0.19437	1	1970	1970		75.043	0.78827	1	1237100			19791	6941	13410	13420	22829	22829					0.07548547708836395
KDTALKGNPG	10	Unmodified	_KDTALKGNPG_					0	0	0			REV__ENSG00000172578|ENST00000341319|KLHL6	REV__ENSG00000172578|ENST00000341319|KLHL6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.77490234375	2	500.774731	999.534909	0.35117	0.00017586	-0.43768	-0.00021918	-0.086516	-4.3325E-05	500.77440458512547	50.648	0.53051	50.698	50.372	50.903	0.049896					40	17	3	0	0	0	0.42393	1	3966	3966		62.107	5.3864	1	218880	+		19792	21843	13411	13421	22830	22830					0.03512268437862076
KDTALKGNPG	10	Unmodified	_KDTALKGNPG_					0	0	0			REV__ENSG00000172578|ENST00000341319|KLHL6	REV__ENSG00000172578|ENST00000341319|KLHL6	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	500.774731	999.534909	-1.48	-0.00074115	0.77459	0.0003879	-0.70542	-0.00035326	500.77520179835545	50.501	0.59034	50.501	50.257	50.848	0	-0.019208	0.00055404	NaN	62.107	34	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183120	+		19793	21843	13411	13421							0.03512268437862076
KDTALKGNPG	10	Unmodified	_KDTALKGNPG_					0	0	0			REV__ENSG00000172578|ENST00000341319|KLHL6	REV__ENSG00000172578|ENST00000341319|KLHL6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	500.774731	999.534909	0.056658	2.8373E-05	-0.21435	-0.00010734	-0.15769	-7.8967E-05	500.7745224368424	50.468	0.39022	50.466	50.22	50.61	-0.0020447	-0.054476	-0.00043643	NaN	62.107	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54439	+		19794	21843	13411	13421							0.03512268437862076
KDTALKGNPG	10	Unmodified	_KDTALKGNPG_					0	0	0			REV__ENSG00000172578|ENST00000341319|KLHL6	REV__ENSG00000172578|ENST00000341319|KLHL6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	500.774731	999.534909	-1.1288	-0.00056526	0.0022196	1.1115E-06	-1.1265	-0.00056415	500.77479444759933	50.425	0.39415	50.433	50.257	50.651	0.0077438	-0.087383	-0.00021953	NaN	62.107	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58936	+		19795	21843	13411	13421							0.03512268437862076
KDTEEEDF	8	Unmodified	_KDTEEEDF_					0	0	0		nc|ENSG00000197249|P01009-3|SERPINA1;nc|ENSG00000197249|P01009-2|SERPINA1;ENSG00000197249|ENST00000393087|SERPINA1	nc|ENSG00000197249|P01009-3|SERPINA1	nc|ENSG00000197249|P01009-3|SERPINA1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8011779785156	2	506.708919	1011.40329	0.25089	0.00012713	-0.8535	-0.00043247	-0.60261	-0.00030535	506.70816666368944	45.154	0.52242	45.135	44.881	45.403	-0.018585					19	11	2	0	0	0	0.4196	1	3567	3567		30.504	6.3009	1	90031			19796	8147	13412	13422	22831	22831					-0.10196006440571637
KDTILNHMGSV	11	Unmodified	_KDTILNHMGSV_					0	0	0		ENST00000375664.8_2_10:28908866-28909124:+|nuORF	ENST00000375664.8_2_10:28908866-28909124:+|nuORF	ENST00000375664.8_2_10:28908866-28909124:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	607.8108520507812	2	607.81353	1213.61251	-0.97078	-0.00059005	-1.9017	-0.0011559	-2.8725	-0.001746	607.8122382575644	46.874	0.60622	46.874	46.578	47.184	0					29	15	3	0	0	0	0.71921	1	3563	3563		19.263	0	1	206630			19797	10804	13413	13423	22832	22832					0.01424538311721335
KDTKKQPTGT	10	Unmodified	_KDTKKQPTGT_					0	0	0		ENST00000467894.5_1_1:33790468-33797238:-|nuORF;nc|ENSG00000134686|Q8IXK0-3|PHC2;ENST00000485928.5_1_1:33791428-33799821:-|nuORF;nc|ENSG00000134686|Q8IXK0-2|PHC2;nc|ENSG00000134686|Q8IXK0-4|PHC2;nc|ENSG00000134686|Q8IXK0|PHC2;ENSG00000134686|ENST00000683057|PHC2	ENST00000467894.5_1_1:33790468-33797238:-|nuORF	ENST00000467894.5_1_1:33790468-33797238:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3067016601562	2	552.306395	1102.59824	-0.5921	-0.00032702	0.79388	0.00043846	0.20178	0.00011145	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.85692	1	9237	9237		36.318	5.814	1	1102700			19798	3952	13414	13424	22833	22833					0.05104209155092576
KDTKKQPTGT	10	Unmodified	_KDTKKQPTGT_					0	0	0		ENST00000467894.5_1_1:33790468-33797238:-|nuORF;nc|ENSG00000134686|Q8IXK0-3|PHC2;ENST00000485928.5_1_1:33791428-33799821:-|nuORF;nc|ENSG00000134686|Q8IXK0-2|PHC2;nc|ENSG00000134686|Q8IXK0-4|PHC2;nc|ENSG00000134686|Q8IXK0|PHC2;ENSG00000134686|ENST00000683057|PHC2	ENST00000467894.5_1_1:33790468-33797238:-|nuORF	ENST00000467894.5_1_1:33790468-33797238:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3060302734375	2	552.306395	1102.59824	0.26261	0.00014504	-0.18156	-0.00010027	0.081052	4.4766E-05	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.86698	1	9446	9446		28.081	3.5623	1	1950800			19799	3952	13414	13424	22834	22834					0.05104209155092576
KDTMIPGN	8	Unmodified	_KDTMIPGN_					0	0	0		chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26318359375	2	438.218203	874.421853	0.26315	0.00011532	-1.1497	-0.00050381	-0.88653	-0.0003885	438.2180266540121	35.596	0.48813	35.844	35.746	36.234	0.2477					24	12	3	0	0	0	0.4196	1	2737	2737		56.721	38.459	1	150620			19800	169	13415	13425	22835	22835					-0.02038123279703541
KDTMIPGN	8	Unmodified	_KDTMIPGN_					0	0	0		chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2635803222656	2	438.218203	874.421853	0.27852	0.00012205	2.6869	0.0011774	2.9654	0.0012995	438.21893116727335	35.348	0.54089	35.596	35.242	35.783	0.24769					24	13	3	0	0	0	0.4196	1	2641	2641		60.972	25.82	1	169700			19801	169	13415	13425	22836	22836					-0.02038123279703541
KDTMIPGN	8	Unmodified	_KDTMIPGN_					0	0	0		chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.261474609375	2	438.218203	874.421853	-2.3336	-0.0010226	2.6277	0.0011515	0.29411	0.00012888	438.22118891446206	40.763	0.33617	41.155	40.901	41.237	0.39209					15	9	2	0	0	0	0.4196	1	3493	3493		51.335	35.694	1	550780			19802	169	13415	13425	22837	22837					-0.02038123279703541
KDTMIPGN	8	Unmodified	_KDTMIPGN_					0	0	0		chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	chr14:53952229-53952450|18|34.72|0.14|8.0|-|1|BMP4,None|4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26190185546875	2	438.218203	874.421853	-2.6007	-0.0011397	-1.4374	-0.00062991	-4.0381	-0.0017696	438.21614676475645	41.205	0.78614	41.597	41.165	41.952	0.39209					29	21	2	0	0	0	0.4196	1	3565	3565		40.778	1.5253	1	397640			19803	169	13415	13425	22838	22838					-0.02038123279703541
KDTNGENIAES	11	Unmodified	_KDTNGENIAES_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.2737426757812	2	589.270207	1176.52586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.868	1	60.987	60.487	61.487	0.11901								0	0	0	0.56276	1	5294	5294		33.922	5.8401	1				19804	8142	13416	13426	22839	22839					-0.05534169709130765
KDTRFIPG	8	Unmodified	_KDTRFIPG_					0	0	0		ENSG00000029639|ENST00000367166|TFB1M;ENST00000480390.1_1_6:155632297-155635574:-|nuORF	ENSG00000029639|ENST00000367166|TFB1M	ENSG00000029639|ENST00000367166|TFB1M	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.233154296875	2	467.261259	932.507966	-0.43012	-0.00020098	2.6862	0.0012552	2.2561	0.0010542	467.26238204456166	66.712	0.25838	67.263	67.111	67.37	0.55071					13	9	2	0	0	0	0.4196	1	7319	7319		27.882	0	1	126030			19805	879	13417	13427	22840	22840					0.039012046173297676
KDTRKKVERAL	11	Unmodified	_KDTRKKVERAL_					0	0	0			REV__ENSG00000165105|ENST00000376447|RASEF	REV__ENSG00000165105|ENST00000376447|RASEF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.6090393066406	3	448.60877	1342.80448	0.51142	0.00022943	0.77739	0.00034875	1.2888	0.00057817	448.60891312566025	75.185	1.0571	75.23	74.705	75.762	0.04509					87	28	4	0	0	0	0.79716	1	7306	7306		11.932	0	1	364530	+		19806	21147	13418	13428	22841	22841					0.146792020542307
KDTRKKVERAL	11	Unmodified	_KDTRKKVERAL_					0	0	0			REV__ENSG00000165105|ENST00000376447|RASEF	REV__ENSG00000165105|ENST00000376447|RASEF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.60919189453125	3	448.60877	1342.80448	0.6314	0.00028325	0.36355	0.00016309	0.99495	0.00044634	448.60887470875934	77.01	0.99304	77.058	76.682	77.675	0.047981					82	45	2	0	0	0	0.77511	1	7511	7511		16.53	0.6092	1	702210	+		19807	21147	13418	13428	22842	22842					0.146792020542307
KDTTPAPPT	9	Unmodified	_KDTTPAPPT_					0	0	0		ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	ENSG00000205277|ENST00000536621|MUC12	ENSG00000205277|ENST00000536621|MUC12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.790771484375	2	464.242732	926.470912	0.21884	0.00010159	0.51701	0.00024002	0.73584	0.00034161	464.242914237709	34.135	0.24792	34.345	34.234	34.482	0.21003					7	5	2	0	0	0	0.20789	1	2505	2505		42.396	22.399	1	145190			19808	8520	13419	13429	22843	22843					0.004734882808861585
KDTVHKRG	8	Unmodified	_KDTVHKRG_					0	0	0			REV__ENSG00000162378|ENST00000294353|ZYG11B	REV__ENSG00000162378|ENST00000294353|ZYG11B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7689514160156	2	470.769783	939.525013	-1.6002	-0.00075333	-0.071841	-3.3821E-05	-1.6721	-0.00078715	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.94135	1	4360	4360		54.776	5.3348	1	1490800	+		19809	20807	13420	13430	22844	22844					0.052831252231385406
KDTVHKRG	8	Unmodified	_KDTVHKRG_					0	0	0			REV__ENSG00000162378|ENST00000294353|ZYG11B	REV__ENSG00000162378|ENST00000294353|ZYG11B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7694091796875	2	470.769783	939.525013	-0.46187	-0.00021743	-0.8461	-0.00039832	-1.308	-0.00061575	470.7692030231674	55.133	1.6853	55.107	54.397	56.082	-0.025955					109	47	3	0	0	0	0.89043	1	4979	4979		35.618	2.8059	1	1657500	+		19810	20807	13420	13430	22845	22845					0.052831252231385406
KDTVHKRG	8	Unmodified	_KDTVHKRG_					0	0	0			REV__ENSG00000162378|ENST00000294353|ZYG11B	REV__ENSG00000162378|ENST00000294353|ZYG11B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7691955566406	2	470.769783	939.525013	-1.0146	-0.00047764	-0.29264	-0.00013777	-1.3072	-0.0006154	470.7694800096645	54.93	1.6163	54.986	54.192	55.809	0.055611					122	53	3	0	0	0	0.91982	1	4570	4570		45.972	4.5456	1	2574100	+		19811	20807	13420	13430	22846	22846					0.052831252231385406
KDVCLLILT	9	Unmodified	_KDVCLLILT_					0	0	0			REV__nc|ENSG00000214128|A2RRL7-2|TMEM213	REV__nc|ENSG00000214128|A2RRL7-2|TMEM213	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.3056640625	2	509.304278	1016.594	-0.37346	-0.00019021	3.4533	0.0017588	3.0798	0.0015685	509.30591642174505	92.904	1.3737	93.13	92.62	93.993	0.22547					101	32	4	0	0	0	0.76255	1	9432	9432		35.618	1.4457	1	2213400	+		19812	23648	13421	13431	22847	22847					0.08637028407838443
KDVCTNIARIF	11	Unmodified	_KDVCTNIARIF_					0	0	0		nc|ENSG00000118690|Q8NEN0-2|ARMC2;ENSG00000118690|ENST00000392644|ARMC2	nc|ENSG00000118690|Q8NEN0-2|ARMC2	nc|ENSG00000118690|Q8NEN0-2|ARMC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3466186523438	2	640.344997	1278.67544	2.7219	0.001743	-0.429	-0.00027471	2.2929	0.0014683	640.344890509357	103.09	0.62273	103.04	102.7	103.32	-0.047005					51	14	6	0	0	0	0.5603	1	11296	11296		47.657	1.6851	1	3077100			19813	3041	13422	13432	22848	22848					0.04725104099748023
KDVDKYEK	8	Unmodified	_KDVDKYEK_					0	0	0			REV__ENST00000476047.1_1_3:76483489-76483897:+|nuORF	REV__ENST00000476047.1_1_3:76483489-76483897:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7684326171875	2	512.769114	1023.52368	0.92826	0.00047598	-0.98997	-0.00050762	-0.061706	-3.1641E-05	512.7684512724358	22.716	0.75475	22.297	21.97	22.725	-0.41879					42	17	4	0	0	0	0.87259	1	944	944		58.782	5.4305	1	536540	+		19814	18940	13423	13433	22849	22849					0.012854463437065533
KDVERNLSSAR	11	Unmodified	_KDVERNLSSAR_					0	0	0		ENST00000562829.1_1_16:24741141-24788302:+|nuORF	ENST00000562829.1_1_16:24741141-24788302:+|nuORF	ENST00000562829.1_1_16:24741141-24788302:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	637.8461303710938	2	637.844207	1273.67386	0.42263	0.00026957	1.7145	0.0010936	2.1371	0.0013632	637.8452388757121	43.672	1.1051	43.729	43.397	44.503	0.056744					60	26	3	0	0	0	0.50531	1	3005	3005		51.528	5.071	1	2414200			19815	13855	13424	13434	22850	22850					0.047971863353723165
KDVLLRPKRS	10	Unmodified	_KDVLLRPKRS_					0	0	0		ENSG00000137198|ENST00000259727|GMPR;nc|ENSG00000100938|Q9P2T1-3|GMPR2;ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2	ENSG00000137198|ENST00000259727|GMPR;nc|ENSG00000100938|Q9P2T1-3|GMPR2	nc|ENSG00000100938|Q9P2T1-3|GMPR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.58917236328125	3	404.59094	1210.75099	0.081752	3.3076E-05	-4.4169	-0.001787	-4.3351	-0.0017539	404.58905474066694	39.518	1.496	39.488	38.762	40.258	-0.03027					92	35	3	0	0	0	0.84763	1	2762	2762		17.833	1.1158	1	403230			19816	4178;1887	13425	13435	22851	22851					0.15404449342349835
KDVLLRPKRS	10	Unmodified	_KDVLLRPKRS_					0	0	0		ENSG00000137198|ENST00000259727|GMPR;nc|ENSG00000100938|Q9P2T1-3|GMPR2;ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2	ENSG00000137198|ENST00000259727|GMPR;nc|ENSG00000100938|Q9P2T1-3|GMPR2	nc|ENSG00000100938|Q9P2T1-3|GMPR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.5895080566406	3	404.59094	1210.75099	-1.2934	-0.00052329	-3.8685	-0.0015652	-5.1619	-0.0020885	404.5892229323439	41.136	1.2646	41.095	40.508	41.772	-0.04081					80	34	3	0	0	0	0.86549	1	3112	3112		29.551	7.7703	1	339150			19817	4178;1887	13425	13435	22852	22852					0.15404449342349835
KDVLLRPKRS	10	Unmodified	_KDVLLRPKRS_					0	0	0		ENSG00000137198|ENST00000259727|GMPR;nc|ENSG00000100938|Q9P2T1-3|GMPR2;ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2	ENSG00000137198|ENST00000259727|GMPR;nc|ENSG00000100938|Q9P2T1-3|GMPR2	nc|ENSG00000100938|Q9P2T1-3|GMPR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.5888977050781	3	404.59094	1210.75099	-1.9042	-0.00077041	-2.37	-0.0009589	-4.2742	-0.0017293	404.58983696837504	39.349	1.3734	39.36	38.786	40.16	0.010708					98	36	4	0	0	0	0.85654	1	2408	2408		21.78	2.5177	1	332570			19818	4178;1887	13425	13435	22853	22853					0.15404449342349835
KDVLLRPKRS	10	Unmodified	_KDVLLRPKRS_					0	0	0		ENSG00000137198|ENST00000259727|GMPR;nc|ENSG00000100938|Q9P2T1-3|GMPR2;ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2	ENSG00000137198|ENST00000259727|GMPR;nc|ENSG00000100938|Q9P2T1-3|GMPR2	nc|ENSG00000100938|Q9P2T1-3|GMPR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.5893249511719	3	404.59094	1210.75099	0.17885	7.236E-05	-4.4578	-0.0018036	-4.2789	-0.0017312	404.5890516543303	39.161	1.4029	39.25	38.65	40.053	0.088371					99	37	3	0	0	0	0.85441	1	2360	2360		20.837	0.80668	1	306250			19819	4178;1887	13425	13435	22854	22854					0.15404449342349835
KDVLRYGEE	9	Unmodified	_KDVLRYGEE_					0	0	0		nc|ENSG00000130475|O14526-2|FCHO1;chr19:17787846-17788270|61|19.98|0.52|5.27|+|ENST00000594202|FCHO1,FCHO1;nc|ENSG00000130475|O14526-3|FCHO1;ENSG00000130475|ENST00000596536|FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.7846069335938	2	554.785296	1107.55604	-0.20121	-0.00011163	0.060855	3.3761E-05	-0.14035	-7.7864E-05	554.7853454906583	57.513	0.7596	57.547	57.273	58.032	0.033905					48	23	3	0	0	0	0.11055	1	5221	5221		90.37	7.6193	1	282480			19820	267	13426	13436	22855	22855					0.006562337466903045
KDVPRILL	8	Unmodified	_KDVPRILL_					0	0	0			REV__nc|ENSG00000073008|P15151-3|PVR	REV__nc|ENSG00000073008|P15151-3|PVR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.24609375	2	477.310752	952.606951	-1.0031	-0.00047878	-2.7877	-0.0013306	-3.7908	-0.0018094	477.31129763558863	66.421	0.10835	66.972	66.896	67.004	0.55071					4	2	2	0	0	0	0.4196	1	7260	7260		1.2052	0	1	47665	+		19821	16664	13427	13437	22856	22856					0.12875227582242132
KDVSVKVTLKH	11	Unmodified	_KDVSVKVTLKH_					0	0	0		ENSG00000019505|ENST00000020926|SYT13	ENSG00000019505|ENST00000020926|SYT13	ENSG00000019505|ENST00000020926|SYT13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3862915039062	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.75164	1	13091	13091		21.686	0.8486	1	19815000			19822	839	13428	13438	22857	22857					0.1340560990265658
KDVTDGAASA	10	Unmodified	_KDVTDGAASA_					0	0	0			REV__ENSG00000135315|ENST00000403245|CEP162	REV__ENSG00000135315|ENST00000403245|CEP162	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7227783203125	2	467.727446	933.44034	-1.419	-0.00066369	-2.6542	-0.0012415	-4.0732	-0.0019051	467.7260435582499	87.911	0.65132	88.375	88.06	88.711	0.46312					23	15	2	0	0	0	0.37624	1	10394	10394		14.137	2.6261	1	181600	+		19823	19208	13429	13439	22858	22858					-0.029042901041407276
KDVVAKLNF	9	Unmodified	_KDVVAKLNF_					0	0	0			REV__nc|ENSG00000149124|Q6IB77-2|GLYAT	REV__nc|ENSG00000149124|Q6IB77-2|GLYAT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2908325195312	2	517.305667	1032.59678	-0.21388	-0.00011064	-0.879	-0.00045471	-1.0929	-0.00056536	517.806666930536	61.488	1.0906	62.042	61.686	62.776	0.55386					29	25	2	0	0	0	0.20789	1	6603	6603		26.693	0	1	116050	+		19824	20150	13430	13440	22859	22859					0.08178619856994374
KDVVPRVEKG	10	Unmodified	_KDVVPRVEKG_					0	0	0		ENSG00000103653|ENST00000220003|CSK;ENST00000564216.5_1_15:75094247-75094851:+|nuORF	ENSG00000103653|ENST00000220003|CSK	ENSG00000103653|ENST00000220003|CSK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.8323974609375	2	563.83258	1125.65061	1.1189	0.00063088	-1.0374	-0.00058491	0.081525	4.5967E-05	563.8318646992443	22.052	0.8838	21.609	21.235	22.119	-0.44324					49	19	3	0	0	0	0.2953	1	845	845		72.879	4.0331	1	572300			19825	2095	13431	13441	22860	22860					0.09280792288700468
KDWENFMDVMS	11	Unmodified	_KDWENFMDVMS_					0	0	0		ENST00000303296.8_1_11:33378294-33378417:+|nuORF	ENST00000303296.8_1_11:33378294-33378417:+|nuORF	ENST00000303296.8_1_11:33378294-33378417:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2327575683594	3	467.865301	1400.57407	-0.56504	-0.00026436	0.05691	2.6626E-05	-0.50813	-0.00023774	467.86528697206995	70.444	0.45744	70.828	70.542	70.999	0.38416					18	10	2	0	0	0	0.17648	1	7779	7779		15.921	0	1	116190			19826	9830	13432	13442	22861	22861					-0.11019135385117806
KDWHLVTE	8	Unmodified	_KDWHLVTE_					0	0	0		nc|ENSG00000189056|P78509-3|RELN;nc|ENSG00000189056|P78509-2|RELN;ENSG00000189056|ENST00000428762|RELN	nc|ENSG00000189056|P78509-3|RELN	nc|ENSG00000189056|P78509-3|RELN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.2657470703125	2	514.263999	1026.51345	1.1911	0.00061257	-1.3742	-0.00070669	-0.18303	-9.4124E-05	514.2626179683449	50.923	0.44975	51.675	51.408	51.858	0.75174					15	10	3	0	0	0	0.4196	1	5031	5031		17.365	5.8539	1	272850			19827	7984	13433	13443	22862	22862					0.001248834091484241
KDWSEGAKG	9	Unmodified	_KDWSEGAKG_					0	0	0			REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.23583984375	2	489.237981	976.461409	-0.77305	-0.00037821	-2.5786	-0.0012615	-3.3516	-0.0016398	489.23682963313604	63.081	1.9408	63.104	62.828	64.768	0.022984					241	80	5	0	0	0	0.6204	1	5626	5626		45.972	1.8554	1	3852300	+		19828	19079	13434	13444	22863	22863					-0.02776280004616183
KDWTLVET	8	Unmodified	_KDWTLVET_					0	0	0		nc|ENSG00000196091|Q00872-3|MYBPC1;nc|ENSG00000196091|Q00872-9|MYBPC1;nc|ENSG00000196091|Q00872-8|MYBPC1;nc|ENSG00000196091|Q00872|MYBPC1;nc|ENSG00000196091|Q00872-10|MYBPC1;nc|ENSG00000196091|Q00872-6|MYBPC1	nc|ENSG00000196091|Q00872-3|MYBPC1	nc|ENSG00000196091|Q00872-3|MYBPC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.2110900878906	2	496.258382	990.502212	0.39545	0.00019625	-4.276	-0.002122	-3.8806	-0.0019258	496.2560279638264	29.199	0.68801	29.026	28.717	29.405	-0.17336					39	15	4	0	0	0	0.4196	1	1881	1881		17.365	0	1	418830			19829	15175	13435	13445	22864	22864					0.006580613149935743
KDYDLSHS	8	Unmodified	_KDYDLSHS_					0	0	0			REV__nc|ENSG00000163946|Q9UK61-3|TASOR	REV__nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.8103332519531	2	482.722164	963.429775	-0.36696	-0.00017714	-2.7948	-0.0013491	-3.1618	-0.0015263	482.72068641298847	30.554	0.56774	30.557	30.229	30.796	0.0037212					19	12	2	0	0	0	0.4196	1	2013	2013		29.15	1.2673	1	181410	+		19830	21001	13436	13446	22865	22865					-0.05340272758576248
KDYVPSQLEA	10	Unmodified	_KDYVPSQLEA_					0	0	0		ENSG00000138002|ENST00000260570|IFT172;nc|ENSG00000138002|Q9UG01-2|IFT172	ENSG00000138002|ENST00000260570|IFT172	ENSG00000138002|ENST00000260570|IFT172	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2949829101562	2	575.292953	1148.57135	-0.38737	-0.00022285	-0.71135	-0.00040923	-1.0987	-0.00063208	575.2938552163392	76.272	2.3519	76.672	75.494	77.846	0.3997					143	62	4	0	0	0	0.49268	1	8632	8632		56.434	6.8977	1	1387300			19831	4253	13437	13447	22866	22866					0.003011005439248038
KDYVPSQLEA	10	Unmodified	_KDYVPSQLEA_					0	0	0		ENSG00000138002|ENST00000260570|IFT172;nc|ENSG00000138002|Q9UG01-2|IFT172	ENSG00000138002|ENST00000260570|IFT172	ENSG00000138002|ENST00000260570|IFT172	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2938842773438	2	575.292953	1148.57135	-0.40049	-0.0002304	-0.96308	-0.00055405	-1.3636	-0.00078445	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.77314	1	8650	8650		40.778	2.9666	1	1396200			19832	4253	13437	13447	22867	22867					0.003011005439248038
KDYVQEVTK	9	Unmodified	_KDYVQEVTK_					0	0	0		ENST00000398028.3_1_6:151148820-151149375:+|nuORF;ENSG00000115539|ENST00000264254|PDCL3;ENST00000429744.2_1_1:52645740-52646091:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.8129272460938	2	555.295496	1108.57644	-0.41372	-0.00022974	0.50853	0.00028238	0.094811	5.2648E-05	555.2954575851074	70.65	0.62598	71.034	70.668	71.294	0.38416					23	14	2	0	0	0	0.20789	1	7826	7826		29.17	0.020503	1	92439			19833	2853	13438	13448	22868	22868					0.026494044064975242
KDYVQEVTK	9	Unmodified	_KDYVQEVTK_					0	0	0		ENST00000398028.3_1_6:151148820-151149375:+|nuORF;ENSG00000115539|ENST00000264254|PDCL3;ENST00000429744.2_1_1:52645740-52646091:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.8135986328125	2	555.295496	1108.57644	-0.25631	-0.00014233	0.44069	0.00024472	0.18439	0.00010239	555.2955143589411	70.532	0.59616	71.08	70.729	71.325	0.54756					20	14	2	0	0	0	0.20789	1	7841	7841		58.23	12.278	1	124910			19834	2853	13438	13448	22869	22869					0.026494044064975242
KDYVRQHFPAT	11	Unmodified	_KDYVRQHFPAT_					0	0	0		nc|ENSG00000131473|P53396-3|ACLY;nc|ENSG00000131473|P53396-2|ACLY;ENSG00000131473|ENST00000352035|ACLY;ENST00000588779.1_1_17:40024065-40026676:-|nuORF	nc|ENSG00000131473|P53396-3|ACLY	nc|ENSG00000131473|P53396-3|ACLY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.90606689453125	3	454.570204	1360.68878	-0.30019	-0.00013646	4.4145	0.0020067	4.1143	0.0018702	454.5721360794233	29.056	0.42612	29.016	28.785	29.212	-0.039907					34	16	3	0	0	0	0.73277	1	1500	1500		25.892	0.76573	1	33984			19835	3734	13439	13449	22870	22870					0.02286678203381598
KEAAVEDL	8	Unmodified	_KEAAVEDL_					0	0	0		ENST00000460723.5_1_22:32017538-32058194:-|nuORF;ENSG00000241878|ENST00000439502|PISD;ENST00000473770.5_1_22:32017296-32019834:-|nuORF;nc|ENSG00000241878|Q9UG56-2|PISD	ENST00000460723.5_1_22:32017538-32058194:-|nuORF	ENST00000460723.5_1_22:32017538-32058194:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.274169921875	2	437.729458	873.444362	-0.3455	-0.00015123	1.3409	0.00058696	0.99543	0.00043573	437.72985977060665	27.704	0.48127	27.666	27.591	28.072	-0.038523					13	10	2	0	0	0	0.4196	1	1341	1341		18.324	0	1	20473			19836	8796	13440	13450	22871	22871					0.002577993895556574
KEAESDDSD	9	Unmodified	_KEAESDDSD_					0	0	0			REV__ENSG00000084463|ENST00000261167|WBP11	REV__ENSG00000084463|ENST00000261167|WBP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.1939697265625	2	498.193633	994.372714	-0.45783	-0.00022809	1.2664	0.0006309	0.80854	0.00040281	498.19413754012515	32.674	0.72675	32.8	32.417	33.144	0.12643					34	16	3	0	0	0	0.36616	2	2299	2289;2299		60.118	0	1	761730	+		19837	16874	13441	13451	22872;22873	22873					-0.12469784825611896
KEAESDDSD	9	Unmodified	_KEAESDDSD_					0	0	0			REV__ENSG00000084463|ENST00000261167|WBP11	REV__ENSG00000084463|ENST00000261167|WBP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.1942138671875	2	498.193633	994.372714	0.7049	0.00035117	0.29101	0.00014498	0.9959	0.00049615	498.1936071509832	32.632	0.76283	32.843	32.55	33.313	0.21168					38	17	3	0	0	0	0.11055	1	2308	2308		90.37	0	1	840900	+		19838	16874	13441	13451	22874	22874					-0.12469784825611896
KEAETRAEF	9	Unmodified	_KEAETRAEF_					0	0	0		ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000559108.1_1_15:63354467-63358183:+|nuORF;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000140416|P09493-4|TPM1;CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;nc|ENSG00000167460|P67936-2|TPM4;ENSG00000198467|ENST00000645482|TPM2;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000143549|P06753-5|TPM3;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000198467|P07951-3|TPM2;ENSG00000167460|ENST00000643579|TPM4;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000143549|P06753-7|TPM3;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENSG00000143549|ENST00000651641|TPM3	ENST00000368528.3_1_3:27674554-27675208:+|nuORF	ENST00000368528.3_1_3:27674554-27675208:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.7691650390625	2	540.769645	1079.52474	0.53711	0.00029045	-0.76714	-0.00041485	-0.23003	-0.00012439	540.7690431902984	24.273	0.63344	24.227	23.918	24.551	-0.04598					28	13	3	0	0	0	0.73802	1	956	956		37.812	4.9991	1	89385		+	19839	10598	13442	13452	22875	22875					-0.011843392873743142
KEAGKYGR	8	Unmodified	_KEAGKYGR_					0	0	0		ENST00000547301.1_1_12:56114279-56115319:+|nuORF	ENST00000547301.1_1_12:56114279-56115319:+|nuORF	ENST00000547301.1_1_12:56114279-56115319:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.5880126953125	2	454.751059	907.487565	-0.18934	-8.61E-05	2.1268	0.00096718	1.9375	0.00088108	454.75112693596657	24.296	0.79752	23.915	23.533	24.331	-0.38178					24	17	2	0	0	0	0.4196	1	1130	1130		45.952	0	1	43203			19840	13604	13443	13453	22876	22876					0.030120339575091748
KEALAMIINLD	11	Oxidation (M)	_KEALAM(Oxidation (M))IINLD_		KEALAM(1)IINLD		KEALAM(46)IINLD	0	0	1			REV__ENSG00000147894|ENST00000380003|C9orf72	REV__ENSG00000147894|ENST00000380003|C9orf72	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.954345703125	2	623.839213	1245.66387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.405	1	21.451	20.951	21.951	0.045401								0	0	0	0.56276	1	580	580		46.457	12.535	1		+		19841	20090	13444	13454	22877	22877		296			0.050868622857706214
KEALIPPA	8	Unmodified	_KEALIPPA_					0	0	0		ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7748718261719	2	419.755278	837.496004	0.21393	8.9798E-05	-1.954	-0.0008202	-1.7401	-0.0007304	419.75482823718283	42.594	0.23204	42.565	42.373	42.605	-0.029461					6	5	2	0	0	0	0.4196	1	3185	3185		19.36	0	1	24002			19842	8069	13445	13455	22878	22878					0.07075587874123812
KEAPILGPLFT	11	Unmodified	_KEAPILGPLFT_					0	0	0			REV__ENSG00000175073|ENST00000310421|VCPIP1	REV__ENSG00000175073|ENST00000310421|VCPIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3433227539062	2	593.347532	1184.68051	-1.311	-0.00077786	-3.8239	-0.0022689	-5.1349	-0.0030468	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.69931	1	10986	10986		31.634	7.1151	1	3957400	+		19843	22036	13446	13456	22879	22879					0.09555731234036102
KEAPPEIISQ	10	Unmodified	_KEAPPEIISQ_					0	0	0		ENSG00000196653|ENST00000436624|ZNF502	ENSG00000196653|ENST00000436624|ZNF502	ENSG00000196653|ENST00000436624|ZNF502	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.77734375	2	556.303321	1110.59209	-0.16762	-9.3248E-05	3.2018	0.0017812	3.0342	0.0016879	556.3048976357971	77.779	0.24153	78.348	78.219	78.461	0.56836					8	5	2	0	0	0	0.37624	1	8905	8905		24.519	4.5224	1	112000			19844	8086	13447	13457	22880	22880					0.04121690923557253
KEARARKMK	9	Unmodified	_KEARARKMK_					0	0	0			REV__ENSG00000125820|ENST00000377142|NKX2-2	REV__ENSG00000125820|ENST00000377142|NKX2-2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	559.334228515625	2	559.334767	1116.65498	0.62839	0.00035148	1.8751	0.0010488	2.5035	0.0014003	559.3355410265135	31.357	0.71754	31.347	31.001	31.719	-0.010656					34	16	3	0	0	0	0.69624	1	1698	1698		40.778	6.6056	1	100350	+		19845	18672	13448	13458	22881	22881					0.10131978230629102
KEARPRLG	8	Unmodified	_KEARPRLG_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7789306640625	2	463.780151	925.545748	-1.6269	-0.00075451	-3.3133	-0.0015366	-4.9402	-0.0022911	463.77871170676815	40.303	0.42848	40.892	40.721	41.149	0.58915					28	11	4	0	0	0	0.93293	1	3459	3459		51.335	7.2187	1	7368700	+		19846	16084	13449	13459	22882	22882					0.079997156028071
KEARQKQPSV	10	Unmodified	_KEARQKQPSV_					0	0	0			REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	585.8291015625	2	585.833111	1169.65167	-0.75038	-0.0004396	-4.205	-0.0024634	-4.9553	-0.002903	585.8305676475687	57.715	1.3345	57.701	57.24	58.574	-0.013641					81	46	2	0	0	0	0.86802	1	5208	5208		27.047	4.4677	1	146910	+		19847	23179	13450	13460	22883	22883					0.07363006657601545
KEARQKQPSV	10	Unmodified	_KEARQKQPSV_					0	0	0			REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	585.8307495117188	2	585.833111	1169.65167	-1.7612	-0.0010318	-3.2704	-0.0019159	-5.0315	-0.0029476	585.83107982543	57.473	1.4426	57.507	57.139	58.581	0.033909					83	46	2	0	0	0	0.82886	1	5231	5231		37.812	6.2817	1	158750	+		19848	23179	13450	13460	22884	22884					0.07363006657601545
KEARVFLQN	9	Unmodified	_KEARVFLQN_					0	0	0		ENST00000558767.5_1_15:80445384-80454703:+|nuORF;ENST00000537726.5_1_15:80445384-80454681:+|nuORF;nc|ENSG00000103876|P16930-2|FAH;ENSG00000103876|ENST00000561421|FAH	ENST00000558767.5_1_15:80445384-80454703:+|nuORF	ENST00000558767.5_1_15:80445384-80454703:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.8114013671875	2	552.811648	1103.60874	-1.0661	-0.00058937	1.0693	0.00059113	0.003183	1.7596E-06	552.8121887831883	28.272	0.78354	28.175	27.885	28.669	-0.096945					41	18	3	0	0	0	0.35373	1	1695	1695		60.972	7.6205	1	385320			19849	2103	13451	13461	22885	22885					0.061082366001983246
KEAVIKHS	8	Unmodified	_KEAVIKHS_					0	0	0		ENSG00000080608|ENST00000397885|PUM3	ENSG00000080608|ENST00000397885|PUM3	ENSG00000080608|ENST00000397885|PUM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.2691955566406	2	456.269084	910.523616	1.0852	0.00049514	-0.94589	-0.00043158	0.1393	6.3559E-05	456.26850794128734	27.802	1.27	27.547	27.196	28.466	-0.25465					68	30	3	0	0	0	0.38363	1	1651	1651		90.777	0	1	382970			19850	1448	13452	13462	22886	22886					0.06477491134364755
KECIYNLSC	9	Unmodified	_KECIYNLSC_					0	0	0			REV__ENSG00000243244|ENST00000404752|STON1	REV__ENSG00000243244|ENST00000404752|STON1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7433471679688	2	536.743728	1071.4729	-0.022154	-1.1891E-05	3.996	0.0021448	3.9738	0.0021329	536.7457602764791	69.352	1.9441	69.736	69.139	71.084	0.38416					125	50	5	0	0	0	0.7932	1	7695	7695		20.947	1.587	1	4632900	+		19851	16565	13453	13463	22887	22887					-0.05997542297131986
KECPESLCQYS	11	Unmodified	_KECPESLCQYS_					0	0	0		nc|ENSG00000166349|P15918-2|RAG1;ENSG00000166349|ENST00000299440|RAG1	nc|ENSG00000166349|P15918-2|RAG1	nc|ENSG00000166349|P15918-2|RAG1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.8483276367188	2	643.773213	1285.53187	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.864	1	51.898	51.398	52.398	0.034588								0	0	0	0.56276	1	4154	4154		33.922	2.3918	1				19852	6183	13454	13464	22888	22888					-0.09947110793495995
KEDAGDPC	8	Unmodified	_KEDAGDPC_					0	0	0			REV__ENST00000590278.1_1_19:33696051-33698478:+|nuORF	REV__ENST00000590278.1_1_19:33696051-33698478:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.2291564941406	2	417.668543	833.322533	-0.36073	-0.00015067	2.6847	0.0011213	2.3239	0.00097063	417.66953759577365	26.594	1.484	26.556	25.729	27.213	-0.038523					50	34	2	0	0	0	0.4196	1	1283	1283		17.365	0.89182	1	88153	+		19853	18918	13455	13465	22889	22889					-0.10079565964451831
KEDEDDKTVL	10	Unmodified	_KEDEDDKTVL_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;nc|ENSG00000259706|Q58FF3|HSP90B2P	ENSG00000166598|ENST00000299767|HSP90B1	ENSG00000166598|ENST00000299767|HSP90B1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.2901000976562	2	596.290608	1190.56666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.103	1	28.006	27.506	28.506	-0.096947								0	0	0	0.45132	1	1672	1672		33.922	2.2874	1				19854	6216	13456	13466	22890	22890					-0.020998283895323766
KEDEDDKTVL	10	Unmodified	_KEDEDDKTVL_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;nc|ENSG00000259706|Q58FF3|HSP90B2P	ENSG00000166598|ENST00000299767|HSP90B1	ENSG00000166598|ENST00000299767|HSP90B1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.2901000976562	2	596.290608	1190.56666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.102	1	27.847	27.347	28.347	-0.25465								0	0	0	0.45132	1	1685	1685		63.534	13.998	1				19855	6216	13456	13466	22891	22891					-0.020998283895323766
KEDGRLLASK	10	Unmodified	_KEDGRLLASK_					0	0	0		ENSG00000138685|ENST00000644866|FGF2;nc|ENSG00000138685|P09038-3|FGF2;nc|ENSG00000138685|P09038-1|FGF2;nc|ENSG00000138685|P09038|FGF2	ENSG00000138685|ENST00000644866|FGF2	ENSG00000138685|ENST00000644866|FGF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.822998046875	2	558.822212	1115.62987	0.44779	0.00025023	-0.2974	-0.00016619	0.15039	8.404E-05	558.8216653587632	29.557	0.51569	29.468	29.233	29.749	-0.089544					18	11	2	0	0	0	0.51401	1	1894	1894		54.722	1.7857	1	150060			19856	4317	13457	13467	22892	22892					0.07668201909041272
KEDGRLLASK	10	Unmodified	_KEDGRLLASK_					0	0	0		ENSG00000138685|ENST00000644866|FGF2;nc|ENSG00000138685|P09038-3|FGF2;nc|ENSG00000138685|P09038-1|FGF2;nc|ENSG00000138685|P09038|FGF2	ENSG00000138685|ENST00000644866|FGF2	ENSG00000138685|ENST00000644866|FGF2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	558.822212	1115.62987	-0.45028	-0.00025163	0.52051	0.00029087	0.07023	3.9246E-05	558.8225339379155	29.392	0.56344	29.363	29.084	29.647	-0.029207	-0.05246	0.0001538	NaN	54.722	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	174780			19857	4317	13457	13467							0.07668201909041272
KEDRRMGKLRK	11	Unmodified	_KEDRRMGKLRK_					0	0	0			REV__nc|ENSG00000134571|Q14896-2|MYBPC3	REV__nc|ENSG00000134571|Q14896-2|MYBPC3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.6050109863281	3	472.945388	1415.81434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.397	1	43.403	42.903	43.903	0.0057487								0	0	0	0.56276	1	2988	2988		14.086	1.1285	1		+		19858	19152	13458	13468	22893	22893					0.12306066787937198
KEDRTAKLG	9	Unmodified	_KEDRTAKLG_					0	0	0			REV__ENSG00000174501|ENST00000295246|ANKRD36C;REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.26788330078125	2	509.288005	1016.56146	0.98981	0.0005041	-0.73816	-0.00037594	0.25165	0.00012816	509.28767884707986	17.016	0.30765	16.406	16.259	16.567	-0.6107					9	6	2	0	0	0	0.20789	1	204	204		58.23	12.258	1	50247	+		19859	21999;23179	13459	13469	22894	22894					0.05383957329183886
KEDSDEVHL	9	Unmodified	_KEDSDEVHL_					0	0	0		nc|ENSG00000130592|P33241-2|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;ENSG00000130592|ENST00000311604|LSP1;nc|ENSG00000130592|P33241-3|LSP1	nc|ENSG00000130592|P33241-2|LSP1	nc|ENSG00000130592|P33241-2|LSP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.25146484375	2	536.251286	1070.48802	-1.0132	-0.00054334	1.1969	0.00064185	0.1837	9.8507E-05	536.2518120305181	30.88	0.79417	30.959	30.634	31.428	0.079836					43	17	4	0	0	0	0.038282	3	2050	2039;2050;2060		113.41	36.637	1	593070			19860	3660	13460	13470	22895;22896;22897	22896					-0.04440635903961265
KEDSDEVHL	9	Unmodified	_KEDSDEVHL_					0	0	0		nc|ENSG00000130592|P33241-2|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;ENSG00000130592|ENST00000311604|LSP1;nc|ENSG00000130592|P33241-3|LSP1	nc|ENSG00000130592|P33241-2|LSP1	nc|ENSG00000130592|P33241-2|LSP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.252197265625	2	536.251286	1070.48802	-0.15537	-8.3319E-05	0.35514	0.00019044	0.19976	0.00010712	536.251337968255	30.959	0.69424	30.962	30.579	31.274	0.0037193					40	15	4	0	0	0	0.0080651	2	2078	2067;2078		134.81	35.798	1	758960			19861	3660	13460	13470	22898;22899	22899					-0.04440635903961265
KEDTEEHHL	9	Unmodified	_KEDTEEHHL_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000491091.1_1_3:122036542-122036854:+|nuORF;ENST00000457695.2_1_X:100110922-100111255:-|nuORF;ENST00000510646.1_1_5:135764749-135765112:+|nuORF;ENST00000444886.1_1_9:128358162-128358726:+|nuORF;ENST00000523612.1_1_8:142469282-142469963:+|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.2653198242188	2	569.262185	1136.50982	0.62123	0.00035364	-0.52151	-0.00029687	0.099721	5.6767E-05	569.2617447002226	18.026	0.37154	17.544	17.374	17.745	-0.48163					19	7	3	0	0	0	0.47272	1	332	332		53.351	3.9099	1	123260			19862	3232	13461	13471	22900	22900					-0.05297831155394306
KEDTEEYNL	9	Unmodified	_KEDTEEYNL_					0	0	0		ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3;ENSG00000170144|ENST00000392524|HNRNPA3	ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENST00000472163.1_1_3:75263799-75264780:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.75439453125	2	570.756401	1139.49825	-1.8865	-0.0010768	-0.39377	-0.00022474	-2.2803	-0.0013015	570.7560051532682	40.395	0.40005	40.787	40.535	40.935	0.39209					27	10	3	0	0	0	0.48102	1	3443	3443		52.937	0	1	1291600			19863	12258	13462	13472	22901	22901					-0.06592072969374385
KEEAGPPP	8	Unmodified	_KEEAGPPP_					0	0	0			REV__ENSG00000100065|ENST00000251973|CARD10	REV__ENSG00000100065|ENST00000251973|CARD10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2528076171875	2	412.711068	823.407583	1.2836	0.00052977	-0.31879	-0.00013157	0.96484	0.0003982	412.7107172473712	24.256	0.57736	23.874	23.62	24.197	-0.38178					19	12	2	0	0	0	0.4196	1	1188	1188		21.702	0	1	79993	+		19864	17133	13463	13473	22902	22902					-0.011184524363329729
KEEAMRSDRK	10	Unmodified	_KEEAMRSDRK_					0	0	0			REV__nc|ENSG00000106290|P49848-3|TAF6	REV__nc|ENSG00000106290|P49848-3|TAF6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.8223876953125	2	625.319511	1248.62447	-0.61694	-0.00038578	1.5536	0.0009715	0.93667	0.00058572	625.3204345211741	64.692	1.0387	64.692	64.408	65.447	0					102	48	3	0	0	0	0.54701	2	5678	5678;5732		52.937	11.51	1	308710	+		19865	29763	13464	13474	22903;22904	22903					0.010101550549052263
KEEAMRSDRK	10	Unmodified	_KEEAMRSDRK_					0	0	0			REV__nc|ENSG00000106290|P49848-3|TAF6	REV__nc|ENSG00000106290|P49848-3|TAF6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.3211059570312	2	625.319511	1248.62447	-0.11129	-6.9589E-05	0.78331	0.00048982	0.67202	0.00042023	625.3198556455025	64.556	1.0904	64.521	64.106	65.197	-0.034256					72	32	3	0	0	0	0.57924	1	6194	6194		51.193	0	1	434670	+		19866	29763	13464	13474	22905	22905					0.010101550549052263
KEEEEVVMK	9	Unmodified	_KEEEEVVMK_					0	0	0			REV__ENST00000436786.1_1_9:22646290-22682618:+|nuORF	REV__ENST00000436786.1_1_9:22646290-22682618:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.781982421875	2	560.781364	1119.54818	0.31477	0.00017651	-4.4003	-0.0024676	-4.0856	-0.0022911	560.7791508296577	52.432	0.74635	52.856	52.638	53.384	0.42348					39	17	4	0	0	0	0.39367	1	5238	5238		58.23	12.258	1	1492600	+		19867	26695	13465	13475	22906	22906					-0.006816615650677704
KEEGDKDESK	10	Unmodified	_KEEGDKDESK_					0	0	0		ENSG00000106571|ENST00000395925|GLI3	ENSG00000106571|ENST00000395925|GLI3	ENSG00000106571|ENST00000395925|GLI3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.7702026367188	2	582.772582	1163.53061	-0.85916	-0.0005007	-4.4047	-0.0025669	-5.2639	-0.0030676	582.7699033994918	52.338	0.66209	52.351	52.086	52.748	0.012436					33	14	3	0	0	0	0.24988	1	4571	4571		78.264	18.146	1	167640			19868	2303	13466	13476	22907	22907					-0.04461285566389961
KEEIDVAHK	9	Unmodified	_KEEIDVAHK_					0	0	0			REV__ENSG00000108387|ENST00000672673|SEPTIN4	REV__ENSG00000108387|ENST00000672673|SEPTIN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.786865234375	2	534.787838	1067.56112	0.41384	0.00022131	-0.36856	-0.0001971	0.045274	2.4212E-05	534.7875118397072	29.033	1.0827	28.859	28.365	29.448	-0.17336					49	25	4	0	0	0	0.51592	1	1828	1828		51.193	0	1	542710	+		19869	17706	13467	13477	22908	22908					0.03004537609331237
KEEIDVAHKTI	11	Unmodified	_KEEIDVAHKTI_					0	0	0			REV__ENSG00000108387|ENST00000672673|SEPTIN4	REV__ENSG00000108387|ENST00000672673|SEPTIN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3621826171875	2	641.853709	1281.69287	7.1265	0.0045742	2.0307	0.0013034	9.1572	0.0058776	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.74763	1	13720	13720		22.58	0	1	98705	+		19870	17706	13468	13478	22909	22909					0.06328722906414441
KEEIGNVQL	9	Unmodified	_KEEIGNVQL_					0	0	0		nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1;ENSG00000126777|ENST00000395314|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.2823486328125	2	515.282389	1028.55022	0.47353	0.000244	-0.78377	-0.00040386	-0.31024	-0.00015986	515.2817753010579	48.896	0.68486	49.8	49.489	50.174	0.90424					28	16	3	0	0	0	0.07589	2	4756	4756;4769		98.629	16.389	1	759880			19871	3468	13469	13479	22910;22911	22910					0.03709135235044414
KEEIGNVQL	9	Unmodified	_KEEIGNVQL_					0	0	0		nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1;ENSG00000126777|ENST00000395314|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	515.282389	1028.55022	-0.092953	-4.7897E-05	-0.014147	-7.2898E-06	-0.1071	-5.5187E-05	515.282063913411	49.092	0.60685	49.552	49.223	49.83	0.45983	-0.12397	0.0003881	NaN	98.629	28	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	794820			19872	3468	13469	13479							0.03709135235044414
KEEIKKIIRFL	11	Unmodified	_KEEIKKIIRFL_					0	0	0		ENSG00000173597|ENST00000310613|SULT1B1	ENSG00000173597|ENST00000310613|SULT1B1	ENSG00000173597|ENST00000310613|SULT1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.9710998535156	3	472.969417	1415.88642	-0.99152	-0.00046896	4.3588	0.0020616	3.3673	0.0015926	472.9714128496593	48.869	1.9906	48.895	48.114	50.105	0.025574					169	50	5	0	0	0	0.79224	1	3699	3699		12.957	3.7457	1	1653800			19873	6873	13470	13480	22912	22912					0.1951130441332225
KEEKFWMNKII	11	Unmodified	_KEEKFWMNKII_					0	0	0		nc|ENSG00000197641|Q9UIV8-2|SERPINB13	nc|ENSG00000197641|Q9UIV8-2|SERPINB13	nc|ENSG00000197641|Q9UIV8-2|SERPINB13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.60235595703125	3	489.267245	1464.77991	0.53106	0.00025983	0.72547	0.00035495	1.2565	0.00061478	489.2674172664172	32.22	0.68692	32.327	32.059	32.746	0.10707					39	15	4	0	0	0	0.56641	1	2261	2261		47.228	0	1	407120			19874	15195	13471	13481	22913	22913					0.06610805856485058
KEEKPKTVKG	10	Unmodified	_KEEKPKTVKG_					0	0	0			REV__nc|ENSG00000129682|Q92913-4|FGF13	REV__nc|ENSG00000129682|Q92913-4|FGF13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.3390502929688	2	572.340238	1142.66592	1.327	0.00075947	-1.5484	-0.0008862	-0.22143	-0.00012674	572.33942129023	101.52	0.83997	101.57	101.18	102.02	0.044823					41	19	3	0	0	0	0.86587	1	10952	10952		29.17	1.2878	1	295770	+		19875	29837	13472	13482	22914	22914					0.10029659085898857
KEELNALK	8	Unmodified	_KEELNALK_					0	0	0		ENST00000483443.1_1_2:238664770-238678725:+|nuORF;ENST00000498774.1_1_3:178978320-178978392:-|nuORF;ENSG00000124831|ENST00000308482|LRRFIP1;nc|ENSG00000124831|Q32MZ4-3|LRRFIP1;nc|ENSG00000124831|Q32MZ4-2|LRRFIP1;nc|ENSG00000124831|Q32MZ4|LRRFIP1	ENST00000483443.1_1_2:238664770-238678725:+|nuORF;nc|ENSG00000124831|Q32MZ4-3|LRRFIP1	ENST00000483443.1_1_2:238664770-238678725:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.7760009765625	2	472.7742	943.533846	-0.13618	-6.4381E-05	1.7563	0.00083035	1.6202	0.00076597	472.7741354171197	22.959	0.93172	22.375	21.851	22.782	-0.58348					48	22	4	0	0	0	0.90523	1	1007	1007		40.778	1.5253	1	487620			19876	12512;14890	13473	13483	22915	22915					0.05982054068954312
KEELTRRKE	9	Unmodified	_KEELTRRKE_					0	0	0			REV__ENST00000547135.5_1_12:49230675-49230801:-|nuORF	REV__ENST00000547135.5_1_12:49230675-49230801:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.837890625	2	594.838394	1187.66223	1.095	0.00065135	-1.0606	-0.00063089	0.034397	2.0461E-05	594.8377181376378	27.791	0.61516	27.536	27.282	27.897	-0.25465					38	13	4	0	0	0	0.51307	1	1650	1650		51.335	0.14276	1	520980	+		19877	21982	13474	13484	22916	22916					0.07590989312029706
KEEMCRLR	8	Oxidation (M)	_KEEM(Oxidation (M))CRLR_		KEEM(1)CRLR		KEEM(63)CRLR	0	0	1			REV__nc|ENSG00000289701|Q9H257-3|CARD9	REV__nc|ENSG00000289701|Q9H257-3|CARD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.76953125	2	540.768068	1079.52158	0.57209	0.00030937	2.104	0.0011378	2.6761	0.0014471	540.769164777934	24.023	0.62648	24.078	23.732	24.358	0.055485					22	14	2	0	0	0	0.79403	1	831	831		63.306	6.5852	1	72341	+		19878	22951	13475	13485	22917	22917		348			-0.014996289374039407
KEENSTEEQAL	11	Unmodified	_KEENSTEEQAL_					0	0	0		ENSG00000132467|ENST00000254803|UTP3	ENSG00000132467|ENST00000254803|UTP3	ENSG00000132467|ENST00000254803|UTP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	639.295166015625	2	639.296421	1276.57829	-0.90637	-0.00057944	1.0454	0.00066831	0.13901	8.8871E-05	639.2969322537555	29.876	0.61056	29.905	29.575	30.185	0.028618					30	13	3	0	0	0	0.49623	1	1917	1917		52.167	12.109	1	345550			19879	3797	13476	13486	22918	22918					-0.04893631366167028
KEENSTEEQAL	11	Unmodified	_KEENSTEEQAL_					0	0	0		ENSG00000132467|ENST00000254803|UTP3	ENSG00000132467|ENST00000254803|UTP3	ENSG00000132467|ENST00000254803|UTP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	639.2958984375	2	639.296421	1276.57829	1.603	0.0010248	-1.6813	-0.0010748	-0.078297	-5.0055E-05	639.2953118153611	30.002	0.64751	29.912	29.663	30.311	-0.089546					32	14	3	0	0	0	0.38974	2	1952	1941;1952		60.167	15.554	1	516610			19880	3797	13476	13486	22919;22920	22920					-0.04893631366167028
KEEPALVVRPK	11	Unmodified	_KEEPALVVRPK_					0	0	0			REV__nc|ENSG00000257923|P39880-6|CUX1;REV__ENSG00000111249|ENST00000261726|CUX2	REV__ENSG00000111249|ENST00000261726|CUX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5924987792969	3	422.590717	1264.75032	0.27263	0.00011521	4.3666	0.0018453	4.6392	0.0019605	422.5924825344156	49.575	1.8502	49.617	48.754	50.604	0.04224					166	47	4	0	0	0	0.78351	1	3785	3785		14.779	1.2709	1	2165700	+		19881	17854;23925	13477	13487	22921	22921					0.1285360990261779
KEEPLAEPTRL	11	Unmodified	_KEEPLAEPTRL_					0	0	0			REV__nc|ENSG00000133858|O60293-2|ZFC3H1	REV__nc|ENSG00000133858|O60293-2|ZFC3H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3595581054688	2	641.853709	1281.69287	7.1246	0.0045729	1.4783	0.00094886	8.6029	0.0055218	641.8540283171199	112.86	0.36639	112.87	112.77	113.14	0.01696					17	13	2	0	0	0	0.75544	1	13674	13674		20.837	1.7336	1	25310	+		19882	19099	13478	13488	22922	22922					0.06328722906414441
KEEQEVAML	9	Oxidation (M)	_KEEQEVAM(Oxidation (M))L_		KEEQEVAM(1)L		KEEQEVAM(110)L	0	0	1		ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.7652587890625	2	546.765714	1091.51688	-0.43732	-0.00023911	1.4094	0.00077062	0.9721	0.00053151	546.765893402132	37.567	1.1	37.88	37.329	38.429	0.31312					64	27	4	0	0	0	0.051853	2	3017	3017;3029		107.01	31.964	1	842640			19883	7687	13479	13489	22923;22924	22923		132			-0.025222345991551265
KEEQEVAML	9	Oxidation (M)	_KEEQEVAM(Oxidation (M))L_		KEEQEVAM(1)L		KEEQEVAM(77)L	0	0	1		ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.76513671875	2	546.765714	1091.51688	-1.1156	-0.00060998	1.2178	0.00066586	0.10221	5.5884E-05	546.7661613645445	38.572	0.99902	38.914	38.192	39.191	0.34187					50	24	3	0	0	0	0.18338	1	3179	3179		77.318	14.339	1	725690			19884	7687	13479	13489	22925	22925		132			-0.025222345991551265
KEEQEVAML	9	Oxidation (M)	_KEEQEVAM(Oxidation (M))L_		KEEQEVAM(1)L		KEEQEVAM(99)L	0	0	1		ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.7657470703125	2	546.765714	1091.51688	0.32718	0.00017889	0.8564	0.00046825	1.1836	0.00064714	546.7655028496192	37.446	0.99228	37.932	37.366	38.359	0.48581					65	24	5	0	0	0	0.076066	2	3029	3017;3029		98.582	23.489	1	1011800			19885	7687	13479	13489	22926;22927	22927		132			-0.025222345991551265
KEEQEVAML	9	Oxidation (M)	_KEEQEVAM(Oxidation (M))L_		KEEQEVAM(1)L		KEEQEVAM(75)L	0	0	1		ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.7655639648438	2	546.765714	1091.51688	-0.89548	-0.00048962	1.1268	0.00061608	0.23129	0.00012646	546.7662039518406	38.459	2.3723	38.981	38.32	40.692	0.52235					84	56	3	0	0	0	0.19437	1	3184	3184		75.043	20.267	1	575650			19886	7687	13479	13489	22928	22928		132			-0.025222345991551265
KEERELLRS	9	Unmodified	_KEERELLRS_					0	0	0		ENST00000508482.5_1_17:48797176-48828101:+|nuORF;ENSG00000108848|ENST00000505658|LUC7L3	ENST00000508482.5_1_17:48797176-48828101:+|nuORF	ENST00000508482.5_1_17:48797176-48828101:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.3297119140625	2	580.325119	1158.63569	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.886	1	16.275	15.775	16.775	-0.6107								0	0	0	0.28565	1	190	190		36.447	7.2767	1				19887	2437	13480	13490	22929	22929					0.06271300420712578
KEETQPPVAL	10	Unmodified	_KEETQPPVAL_					0	0	0		ENST00000510079.2_1_4:79102753-79102939:-|nuORF;nc|ENSG00000142864|Q8NC51-4|SERBP1;ENSG00000142864|ENST00000361219|SERBP1;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1	ENST00000510079.2_1_4:79102753-79102939:-|nuORF	ENST00000510079.2_1_4:79102753-79102939:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.30322265625	2	556.303321	1110.59209	-0.51504	-0.00028652	-0.18595	-0.00010345	-0.70099	-0.00038996	556.3031289934069	44.609	0.93458	45.073	44.578	45.513	0.46313					57	22	3	0	0	0	0.35939	1	4106	4106		67.494	5.8024	1	3680800			19888	4585	13481	13491	22930	22930					0.04121690923557253
KEETQPPVAL	10	Unmodified	_KEETQPPVAL_					0	0	0		ENST00000510079.2_1_4:79102753-79102939:-|nuORF;nc|ENSG00000142864|Q8NC51-4|SERBP1;ENSG00000142864|ENST00000361219|SERBP1;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1	ENST00000510079.2_1_4:79102753-79102939:-|nuORF	ENST00000510079.2_1_4:79102753-79102939:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.3029174804688	2	556.303321	1110.59209	-1.2336	-0.00068626	0.39316	0.00021872	-0.84045	-0.00046755	556.3034098375188	44.438	0.9292	45.282	44.82	45.749	0.84438					57	22	3	0	0	0	0.19099	2	4100	4087;4100		88.177	33.455	1	4093700			19889	4585	13481	13491	22931;22932	22932					0.04121690923557253
KEFDEDSEDRL	11	Unmodified	_KEFDEDSEDRL_					0	0	0		ENST00000586456.1_1_17:75486911-75493449:+|nuORF;nc|ENSG00000184640|Q9UHD8-4|SEPTIN9;nc|ENSG00000184640|Q9UHD8-9|SEPTIN9;ENST00000592481.5_1_17:75447336-75492345:+|nuORF;nc|ENSG00000184640|Q9UHD8-3|SEPTIN9;nc|ENSG00000184640|Q9UHD8-8|SEPTIN9;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;ENSG00000184640|ENST00000427177|SEPTIN9	ENST00000586456.1_1_17:75486911-75493449:+|nuORF	ENST00000586456.1_1_17:75486911-75493449:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.54052734375	3	461.540528	1381.59975	-0.8746	-0.00040366	0.70299	0.00032446	-0.17161	-7.9205E-05	461.5407519759276	38.381	0.69371	38.722	38.497	39.191	0.34187					44	16	4	0	0	0	0.60817	1	3160	3160		43.501	5.9014	1	656410			19890	7632	13482	13492	22933	22933					-0.07578246337470773
KEFDEDSEDRL	11	Unmodified	_KEFDEDSEDRL_					0	0	0		ENST00000586456.1_1_17:75486911-75493449:+|nuORF;nc|ENSG00000184640|Q9UHD8-4|SEPTIN9;nc|ENSG00000184640|Q9UHD8-9|SEPTIN9;ENST00000592481.5_1_17:75447336-75492345:+|nuORF;nc|ENSG00000184640|Q9UHD8-3|SEPTIN9;nc|ENSG00000184640|Q9UHD8-8|SEPTIN9;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;ENSG00000184640|ENST00000427177|SEPTIN9	ENST00000586456.1_1_17:75486911-75493449:+|nuORF	ENST00000586456.1_1_17:75486911-75493449:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	461.540528	1381.59975	-0.50281	-0.00023207	0.17421	8.0407E-05	-0.3286	-0.00015166	461.54061123941426	38.223	0.52339	38.745	38.513	39.036	0.52235	0.011219	-0.00045581	NaN	43.501	35	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	546610			19891	7632	13482	13492							-0.07578246337470773
KEFEPLLNW	9	Unmodified	_KEFEPLLNW_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;ENST00000415545.2_1_1:92108345-92109332:+|nuORF;ENST00000551983.1_1_12:104335630-104337190:+|nuORF	ENSG00000166598|ENST00000299767|HSP90B1	ENSG00000166598|ENST00000299767|HSP90B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	588.3074340820312	2	588.308406	1174.60226	-0.69971	-0.00041164	1.0962	0.00064488	0.39645	0.00023323	588.3087196328155	78.925	0.84599	78.981	78.595	79.441	0.056114					56	22	4	0	0	0	0.002448	6	7691	7660;7672;7680;7691;7701;7710		141.52	53.343	1	404200			19892	6216	13483	13493	22934;22935;22936;22937;22938;22939	22937					0.02194298648782933
KEFEPLLNW	9	Unmodified	_KEFEPLLNW_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;ENST00000415545.2_1_1:92108345-92109332:+|nuORF;ENST00000551983.1_1_12:104335630-104337190:+|nuORF	ENSG00000166598|ENST00000299767|HSP90B1	ENSG00000166598|ENST00000299767|HSP90B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	588.3077392578125	2	588.308406	1174.60226	0.65943	0.00038795	-0.24228	-0.00014253	0.41715	0.00024541	588.3078699211738	78.978	0.85091	78.924	78.592	79.443	-0.053558					57	22	4	0	0	0	0.076066	4	7898	7878;7889;7898;7908		98.582	23.053	1	444190			19893	6216	13483	13493	22940;22941;22942;22943	22942					0.02194298648782933
KEFEPLLNW	9	Unmodified	_KEFEPLLNW_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;ENST00000415545.2_1_1:92108345-92109332:+|nuORF;ENST00000551983.1_1_12:104335630-104337190:+|nuORF	ENSG00000166598|ENST00000299767|HSP90B1	ENSG00000166598|ENST00000299767|HSP90B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	588.3073120117188	2	588.308406	1174.60226	-1.2221	-0.00071897	1.2182	0.00071669	-0.0038762	-2.2804E-06	588.3088429407152	78.8	0.82715	78.852	78.572	79.399	0.051682					57	22	4	0	0	0	0.021781	5	7770	7742;7751;7761;7770;7780		124.08	44.368	1	465640			19894	6216	13483	13493	22944;22945;22946;22947;22948	22947					0.02194298648782933
KEFFPRRKVF	10	Unmodified	_KEFFPRRKVF_					0	0	0		ENST00000305135.9_1_3:183529275-183529383:+|nuORF	ENST00000305135.9_1_3:183529275-183529383:+|nuORF	ENST00000305135.9_1_3:183529275-183529383:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9320983886719	3	451.931185	1352.77173	-0.99129	-0.000448	4.2998	0.0019432	3.3085	0.0014952	451.9330862164875	100.92	2.2384	100.92	100.04	102.28	0					149	53	4	0	0	0	0.85086	1	10366	10366		19.263	2.5453	1	534780			19895	9847	13484	13494	22949	22949					0.10945039722014371
KEFIFLGLTQS	11	Unmodified	_KEFIFLGLTQS_					0	0	0		ENSG00000176200|ENST00000313253|OR4D11	ENSG00000176200|ENST00000313253|OR4D11	ENSG00000176200|ENST00000313253|OR4D11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3577270507812	2	641.855721	1281.69689	7.1265	0.0045742	-1.103	-0.00070794	6.0235	0.0038662	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.68532	1	13738	13738		33.922	4.7516	1	98705			19896	7063	13485	13495	22950	22950					0.0673081240013289
KEFISYNINID	11	Unmodified	_KEFISYNINID_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.5653991699219	3	452.566237	1354.67688	0.96065	0.00043476	-2.9923	-0.0013542	-2.0316	-0.00091944	452.5648328519949	17.735	0.69533	17.811	17.602	18.298	0.075441					55	22	4	0	0	0	0.5872	1	219	219		45.764	5.8912	1	433450			19897	8133	13486	13496	22951	22951					0.013730166695495427
KEFLKTTK	8	Unmodified	_KEFLKTTK_					0	0	0		ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7872009277344	2	497.800217	993.585882	-0.78631	-0.00039143	2.0636	0.0010273	1.2773	0.00063584	497.80144667038456	26.95	0.31233	26.775	26.658	26.971	-0.17559					8	6	2	0	0	0	0.4196	1	1510	1510		96.19	2.995	1	22600			19898	1521	13487	13497	22952	22952					0.08883217482718919
KEFSANKLSS	10	Unmodified	_KEFSANKLSS_					0	0	0			REV__ENSG00000212710|ENST00000391403|CTAGE1	REV__ENSG00000212710|ENST00000391403|CTAGE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.7938842773438	2	555.793121	1109.57169	0.91689	0.0005096	-1.9902	-0.0011062	-1.0734	-0.00059656	555.7920395060265	27.03	0.51847	27.003	26.749	27.267	-0.027704					35	13	4	0	0	0	0.86106	1	1217	1217		33.922	1.9668	1	61653	+		19899	23602	13488	13498	22953	22953					0.021285202637500333
KEFYQFPRYWW	11	Unmodified	_KEFYQFPRYWW_					0	0	0			REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.9378662109375	3	550.601504	1648.78268	-1.5742	-0.00086674	4.4516	0.0024511	2.8774	0.0015843	550.6038872801544	26.083	0.59474	26.083	25.871	26.466	0					67	25	4	0	0	0	0.79476	1	989	989		12.433	6.112	1	207780	+		19900	23430	13489	13499	22954	22954					-0.015756026943563484
KEFYQFPRYWW	11	Unmodified	_KEFYQFPRYWW_					0	0	0			REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.9351806640625	3	550.601504	1648.78268	0.48693	0.0002681	-1.1506	-0.0006335	-0.66363	-0.00036539	550.6008568284933	18.08	0.56966	18.156	17.968	18.538	0.075441					48	16	5	0	0	0	0.79476	1	244	244		12.433	5.7732	1	241290	+		19901	23430	13489	13499	22955	22955					-0.015756026943563484
KEFYQFPRYWW	11	Unmodified	_KEFYQFPRYWW_					0	0	0			REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.6010131835938	3	550.601504	1648.78268	-0.057816	-3.1833E-05	-0.81154	-0.00044684	-0.86936	-0.00047867	550.6010595542077	18.815	1.0768	18.338	18.077	19.153	-0.47694					48	23	4	0	0	0	0.89215	1	443	443		3.2113	0	1	399640	+		19902	23430	13489	13499	22956	22956					-0.015756026943563484
KEFYQFPRYWW	11	Unmodified	_KEFYQFPRYWW_					0	0	0			REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.6046142578125	3	550.601504	1648.78268	-0.79031	-0.00043514	3.5204	0.0019383	2.7301	0.0015032	550.6035347688205	26.584	0.54278	26.409	26.115	26.658	-0.17559					29	11	3	0	0	0	0.81407	1	1490	1490		8.4073	2.0864	1	432270	+		19903	23430	13489	13499	22957	22957					-0.015756026943563484
KEFYQFPRYWW	11	Unmodified	_KEFYQFPRYWW_					0	0	0			REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.6022338867188	3	550.601504	1648.78268	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.492	1	18.862	18.362	19.362	-0.6296								0	0	0	0.56276	1	528	528		5.4129	2.0042	1		+		19904	23430	13489	13499	22958	22958					-0.015756026943563484
KEGDIVKR	8	Unmodified	_KEGDIVKR_					0	0	0		nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A;ENSG00000152234|ENST00000398752|ATP5F1A;ENST00000589611.1_1_18:43669530-43671830:-|nuORF;ENST00000590448.5_1_18:43669752-43675082:-|nuORF	nc|ENSG00000152234|P25705-2|ATP5F1A	nc|ENSG00000152234|P25705-2|ATP5F1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.77777099609375	2	472.779816	943.545079	0.72453	0.00034254	-0.56577	-0.00026748	0.15877	7.5062E-05	472.7793610943385	23.239	0.46783	22.82	22.649	23.116	-0.41879					23	10	3	0	0	0	0.91472	1	1003	1003		44.117	4.864	1	170180			19905	5164	13490	13500	22959	22959					0.07104876163100471
KEGHLKLHV	9	Unmodified	_KEGHLKLHV_					0	0	0			REV__ENSG00000164935|ENST00000297581|DCSTAMP	REV__ENSG00000164935|ENST00000297581|DCSTAMP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8174438476562	2	530.816733	1059.61891	-0.070245	-3.7287E-05	2.0177	0.0010711	1.9475	0.0010338	531.3174969816582	84.516	1.6744	84.692	84.02	85.694	0.17561					56	38	2	0	0	0	0.20789	1	8336	8336		20.947	13.754	1	271920	+		19906	21132	13491	13501	22960	22960					0.091488443254093
KEGKKRKP	8	Unmodified	_KEGKKRKP_					0	0	0			REV__ENSG00000166197|ENST00000605788|NOLC1	REV__ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.8118591308594	2	485.811451	969.608348	0.071633	3.48E-05	-0.41015	-0.00019925	-0.33851	-0.00016445	485.8111818274462	17.745	0.33186	17.124	17.023	17.355	-0.62141					12	8	2	0	0	0	0.89962	1	306	306		38.806	3.1879	1	80536	+		19907	21266	13492	13502	22961	22961					0.12232861670986495
KEGKKRKP	8	Unmodified	_KEGKKRKP_					0	0	0			REV__ENSG00000166197|ENST00000605788|NOLC1	REV__ENSG00000166197|ENST00000605788|NOLC1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	485.811451	969.608348	0.58397	0.0002837	-0.95253	-0.00046275	-0.36856	-0.00017905	485.81082797558173	17.666	0.24058	17.183	16.991	17.232	-0.48256	0.029739	-0.0001855	NaN	38.806	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66259	+		19908	21266	13492	13502							0.12232861670986495
KEGKKRKP	8	Unmodified	_KEGKKRKP_					0	0	0			REV__ENSG00000166197|ENST00000605788|NOLC1	REV__ENSG00000166197|ENST00000605788|NOLC1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	485.811451	969.608348	0.071633	3.48E-05	-0.41015	-0.00019925	-0.33851	-0.00016445	485.8111818274462	17.745	0.33186	17.124	17.023	17.355	-0.62141	-0.029739	0.00034149	NaN	38.806	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80536	+		19909	21266	13492	13502							0.12232861670986495
KEGLDIYKKF	10	Unmodified	_KEGLDIYKKF_					0	0	0		nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;ENSG00000073921|ENST00000393346|PICALM;ENST00000531771.5_1_11:85718509-85733504:-|nuORF	nc|ENSG00000073921|Q13492-4|PICALM	nc|ENSG00000073921|Q13492-4|PICALM	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.93267822265625	3	414.236051	1239.68632	1.705	0.00070626	-2.7881	-0.0011549	-1.0832	-0.00044868	414.2347296404114	43.718	0.67563	43.716	43.455	44.131	-0.0024452					39	16	3	0	0	0	0.37624	1	3369	3369		65.157	20.135	1	221230			19910	1302	13493	13503	22962	22962					0.0760682974566862
KEGLNRIP	8	Unmodified	_KEGLNRIP_					0	0	0		ENST00000503701.1_1_5:142813363-142814232:-|nuORF	ENST00000503701.1_1_5:142813363-142814232:-|nuORF	ENST00000503701.1_1_5:142813363-142814232:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7725524902344	2	463.774534	925.534515	1.6265	0.00075433	-1.7075	-0.00079191	-0.081035	-3.7582E-05	463.77368742040437	24.507	1.7866	23.994	23.322	25.109	-0.51365					94	40	5	0	0	0	0.73851	1	1162	1162		65.803	12.452	1	3065500			19911	12891	13494	13504	22963	22963					0.06876893508649573
KEGPATVPYT	10	Unmodified	_KEGPATVPYT_					0	0	0			REV__ENST00000448264.1_1_1:225888386-225888533:+|nuORF	REV__ENST00000448264.1_1_1:225888386-225888533:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.758544921875	2	531.776939	1061.53933	-0.017688	-9.406E-06	-1.3985	-0.00074367	-1.4161	-0.00075307	531.7784441227896	83.236	0.4098	83.667	83.334	83.744	0.43108					14	9	2	0	0	0	0.37624	1	9616	9616		47.657	17.154	1	61695	+		19912	26835	13495	13505	22964	22964					0.011017328607522359
KEHFIRAE	8	Unmodified	_KEHFIRAE_					0	0	0		ENSG00000133030|ENST00000651222|MPRIP;nc|ENSG00000133030|Q6WCQ1-3|MPRIP;nc|ENSG00000133030|Q6WCQ1-2|MPRIP;nc|ENSG00000133030|Q6WCQ1|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.81396484375	2	515.277441	1028.54033	0.48955	0.00025226	3.6076	0.0018589	4.0972	0.0021112	515.2801404719513	16.491	0.22968	15.893	15.74	15.97	-0.59873					8	4	3	0	0	0	0.4196	1	147	147		51.335	0	1	28323			19913	3850	13496	13506	22965	22965					0.02719992020342943
KEHHPLLA	8	Unmodified	_KEHHPLLA_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7679138183594	2	472.769252	943.52395	-1.1704	-0.00055331	-3.3176	-0.0015685	-4.488	-0.0021218	472.7675708557848	81.903	1.7553	81.903	80.894	82.649	0					73	51	2	0	0	0	0.87922	1	7552	7552		31.955	7.4508	1	95443			19914	14831	13497	13507	22966	22966					0.04992910854218735
KEHKKSFNHSL	11	Unmodified	_KEHKKSFNHSL_					0	0	0		ENSG00000136866|ENST00000374227|ZFP37;nc|ENSG00000136866|Q9Y6Q3-3|ZFP37;nc|ENSG00000136866|Q9Y6Q3-2|ZFP37	ENSG00000136866|ENST00000374227|ZFP37	ENSG00000136866|ENST00000374227|ZFP37	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.88043212890625	3	452.245721	1353.71533	-0.096989	-4.3863E-05	0.72526	0.000328	0.62828	0.00028413	452.24609512490144	19.796	0.56478	19.326	19.019	19.584	-0.46967					16	11	2	0	0	0	0.17521	1	530	530		17.167	0	1	43063			19915	4146	13498	13508	22967	22967					0.052623670947014034
KEIDIKSIACH	11	Unmodified	_KEIDIKSIACH_					0	0	0			REV__ENST00000486873.2_1_2:169699570-169711975:+|nuORF	REV__ENST00000486873.2_1_2:169699570-169711975:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.56231689453125	3	419.560429	1255.65946	0.91186	0.00038258	3.5534	0.0014909	4.4653	0.0018735	419.56183416104074	17.238	0.26238	17.315	17.205	17.468	0.077148					21	10	3	0	0	0	0.69687	1	170	170		32.034	4.4804	1	56146	+		19916	20878	13499	13509	22968	22968					0.04185397862852369
KEIDIKSIACH	11	Unmodified	_KEIDIKSIACH_					0	0	0			REV__ENST00000486873.2_1_2:169699570-169711975:+|nuORF	REV__ENST00000486873.2_1_2:169699570-169711975:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	419.560429	1255.65946	0.91186	0.00038258	3.5534	0.0014909	4.4653	0.0018735	419.56183416104074	17.238	0.26238	17.315	17.205	17.468	0.077148	-0.020651	0.00038737	NaN	32.034	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56146	+		19917	20878	13499	13509							0.04185397862852369
KEIDIKSIACH	11	Unmodified	_KEIDIKSIACH_					0	0	0			REV__ENST00000486873.2_1_2:169699570-169711975:+|nuORF	REV__ENST00000486873.2_1_2:169699570-169711975:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	419.560429	1255.65946	-0.40524	-0.00017002	4.9334	0.0020698	4.5281	0.0018998	419.5624014319975	17.4	0.28362	17.321	17.178	17.461	-0.079056	-0.014766	0.0021242	NaN	32.034	23	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69975	+		19918	20878	13499	13509							0.04185397862852369
KEIDIKSIACH	11	Unmodified	_KEIDIKSIACH_					0	0	0			REV__ENST00000486873.2_1_2:169699570-169711975:+|nuORF	REV__ENST00000486873.2_1_2:169699570-169711975:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	419.560429	1255.65946	2.9386	0.0012329	1.38	0.00057901	4.3186	0.0018119	419.5608969814086	17.453	0.2112	17.371	17.264	17.476	-0.0821	0.035417	-0.0023483	NaN	32.034	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69686	+		19919	20878	13499	13509							0.04185397862852369
KEIDKGKKSD	10	Unmodified	_KEIDKGKKSD_					0	0	0			REV__ENSG00000155833|ENST00000374798|CYLC2	REV__ENSG00000155833|ENST00000374798|CYLC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3193359375	2	574.319502	1146.62445	1.0954	0.0006291	-1.1095	-0.00063718	-0.01407	-8.0805E-06	574.3187099892803	94.307	4.5457	94.353	93.159	97.704	0.046173					261	107	4	0	0	0	0.78666	2	9919	9919;9977		40.058	8.5284	1	1593500	+		19920	20447	13500	13510	22969;22970	22969					0.05700478326571101
KEIERKPDKKI	11	Unmodified	_KEIERKPDKKI_					0	0	0			REV__nc|ENSG00000196228|Q6IMI6|SULT1C3	REV__nc|ENSG00000196228|Q6IMI6|SULT1C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.9483642578125	3	461.948793	1382.82455	0.76575	0.00035374	-2.1101	-0.00097476	-1.3444	-0.00062102	461.94782502952427	107.84	0.75671	107.93	107.26	108.01	0.084404					86	18	6	0	0	0	0.75457	1	11560	11560		21.032	1.7696	1	101570000	+		19921	30125	13501	13511	22971	22971					0.14844952994167215
KEIFGQDARSA	11	Unmodified	_KEIFGQDARSA_					0	0	0		ENSG00000134007|ENST00000256389|ADAM20	ENSG00000134007|ENST00000256389|ADAM20	ENSG00000134007|ENST00000256389|ADAM20	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3656616210938	2	611.314751	1220.61495	-1.2525	-0.0007657	2.9236	0.0017872	1.6711	0.0010215	611.8162216030526	96.091	0.4694	96.294	96.147	96.617	0.20242					14	10	2	0	0	0	0.16675	1	9848	9848		32.751	1.2207	1	80396			19922	3903	13502	13512	22972	22972					0.01346710041048027
KEIFLRELI	9	Unmodified	_KEIFLRELI_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000506915.1_1_4:190394211-190394298:+|nuORF;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;ENST00000559111.1_1_15:99797871-99798159:+|nuORF;ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P;ENSG00000096384|ENST00000371646|HSP90AB1	ENSG00000166598|ENST00000299767|HSP90B1;ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.8551025390625	2	580.855524	1159.69649	-0.88268	-0.00051271	0.44853	0.00026053	-0.43416	-0.00025218	580.8556493633963	65.546	0.35038	65.55	65.307	65.657	0.0046921					34	18	2	0	0	0	0.39367	1	6161	6161		58.23	10.27	1	191190			19923	1452;6216	13503	13513	22973	22973					0.12303437470950485
KEIFLRELI	9	Unmodified	_KEIFLRELI_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000506915.1_1_4:190394211-190394298:+|nuORF;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;ENST00000559111.1_1_15:99797871-99798159:+|nuORF;ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P;ENSG00000096384|ENST00000371646|HSP90AB1	ENSG00000166598|ENST00000299767|HSP90B1;ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.8552856445312	2	580.855524	1159.69649	0.029419	1.7088E-05	-0.48641	-0.00028254	-0.45699	-0.00026545	580.855109681159	65.325	0.44607	65.29	65.067	65.513	-0.03479					35	22	2	0	0	0	0.3164	1	6266	6266		63.534	17.562	1	216860			19924	1452;6216	13503	13513	22974	22974					0.12303437470950485
KEIFLRELI	9	Unmodified	_KEIFLRELI_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000506915.1_1_4:190394211-190394298:+|nuORF;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;ENST00000559111.1_1_15:99797871-99798159:+|nuORF;ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P;ENSG00000096384|ENST00000371646|HSP90AB1	ENSG00000166598|ENST00000299767|HSP90B1;ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.8517456054688	2	580.855524	1159.69649	-1.1764	-0.00068331	0.73294	0.00042573	-0.44344	-0.00025757	580.8557701178651	65.309	0.40404	65.337	65.074	65.478	0.027321					34	20	2	0	0	0	0.6107	1	6191	6191		46.457	3.5925	1	196350			19925	1452;6216	13503	13513	22975	22975					0.12303437470950485
KEIFLRELI	9	Unmodified	_KEIFLRELI_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000506915.1_1_4:190394211-190394298:+|nuORF;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;ENST00000559111.1_1_15:99797871-99798159:+|nuORF;ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P;ENSG00000096384|ENST00000371646|HSP90AB1	ENSG00000166598|ENST00000299767|HSP90B1;ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8577880859375	2	580.855524	1159.69649	-1.8735	-0.0010882	4.4592	0.0025902	2.5858	0.001502	580.8581610437462	62.709	0.65023	63.096	62.881	63.532	0.38779					38	14	4	0	0	0	0.3164	1	6738	6738		63.534	5.3039	1	1064900			19926	1452;6216	13503	13513	22976	22976					0.12303437470950485
KEIFLRELI	9	Unmodified	_KEIFLRELI_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000506915.1_1_4:190394211-190394298:+|nuORF;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;ENST00000559111.1_1_15:99797871-99798159:+|nuORF;ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P;ENSG00000096384|ENST00000371646|HSP90AB1	ENSG00000166598|ENST00000299767|HSP90B1;ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.85595703125	2	580.855524	1159.69649	-0.55011	-0.00031953	3.3832	0.0019651	2.8331	0.0016456	580.8574540257367	62.59	0.51871	63.144	62.993	63.512	0.55449					20	11	2	0	0	0	0.12394	2	6742	6730;6742		88.177	24.643	1	1055600			19927	1452;6216	13503	13513	22977;22978	22978					0.12303437470950485
KEIFTKPLN	9	Unmodified	_KEIFTKPLN_					0	0	0		ENSG00000203952|ENST00000695460|CCDC160	ENSG00000203952|ENST00000695460|CCDC160	ENSG00000203952|ENST00000695460|CCDC160	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3174438476562	2	545.318774	1088.623	-1.3538	-0.00073823	-2.3594	-0.0012866	-3.7132	-0.0020249	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.78124	1	10268	10268		30.318	1.1477	1	5184000			19928	8403	13504	13514	22979	22979					0.08222889028479585
KEIFVFVIVVF	11	Unmodified	_KEIFVFVIVVF_					0	0	0			REV__ENSG00000122863|ENST00000373115|CHST3	REV__ENSG00000122863|ENST00000373115|CHST3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.2730712890625	3	447.272325	1338.79515	2.7481	0.0012291	-1.4355	-0.00064204	1.3126	0.00058709	447.2715969592816	107.28	1.0213	107.25	106.57	107.59	-0.034134					90	23	5	0	0	0	0.74405	1	11902	11902		23.378	3.0629	1	9462500	+		19929	18518	13505	13515	22980	22980					0.13930040715968062
KEIFVFVIVVF	11	Unmodified	_KEIFVFVIVVF_					0	0	0			REV__ENSG00000122863|ENST00000373115|CHST3	REV__ENSG00000122863|ENST00000373115|CHST3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.2732238769531	3	447.272325	1338.79515	2.748	0.0012291	-1.6862	-0.00075418	1.0618	0.00047491	447.27148035991394	107.89	0.36398	107.85	107.55	107.92	-0.031487					34	8	5	0	0	0	0.73621	1	11961	11961		25.126	4.0938	1	23752000	+		19930	18518	13505	13515	22981	22981					0.13930040715968062
KEIFVFVIVVF	11	Unmodified	_KEIFVFVIVVF_					0	0	0			REV__ENSG00000122863|ENST00000373115|CHST3	REV__ENSG00000122863|ENST00000373115|CHST3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	447.2728271484375	3	447.272325	1338.79515	1.5068	0.00067396	-0.22327	-9.9861E-05	1.2836	0.0005741	447.2721343487067	107.14	1.0643	107.17	106.58	107.65	0.035622					102	24	6	0	0	0	0.74405	1	11761	11761		23.378	1.5975	1	9102100	+		19931	18518	13505	13515	22982	22982					0.13930040715968062
KEIFVFVIVVF	11	Unmodified	_KEIFVFVIVVF_					0	0	0			REV__ENSG00000122863|ENST00000373115|CHST3	REV__ENSG00000122863|ENST00000373115|CHST3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.27294921875	3	447.272325	1338.79515	-1.2894	-0.00057671	2.0422	0.00091341	0.75279	0.0003367	447.27316892355236	107.81	0.50114	107.95	107.57	108.07	0.13866					44	12	5	0	0	0	0.74405	2	11586	11586;11600		23.378	1.5975	1	39114000	+		19932	18518	13505	13515	22983;22984	22983					0.13930040715968062
KEIFVFVIVVF	11	Unmodified	_KEIFVFVIVVF_					0	0	0			REV__ENSG00000122863|ENST00000373115|CHST3	REV__ENSG00000122863|ENST00000373115|CHST3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.2727355957031	3	447.272325	1338.79515	0.74994	0.00033543	0.43087	0.00019272	1.1808	0.00052814	447.27246467576646	106.88	1.1653	106.97	106.51	107.68	0.091255					134	27	6	0	0	0	0.72374	2	11470	11434;11470		27.644	4.266	1	19906000	+		19933	18518	13505	13515	22985;22986	22986					0.13930040715968062
KEIFVFVIVVF	11	Unmodified	_KEIFVFVIVVF_					0	0	0			REV__ENSG00000122863|ENST00000373115|CHST3	REV__ENSG00000122863|ENST00000373115|CHST3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.2731018066406	3	447.272325	1338.79515	0.74993	0.00033542	0.38408	0.00017179	1.134	0.00050721	447.27239062607987	107.84	0.4288	107.93	107.58	108.01	0.084412					37	10	5	0	0	0	0.71207	1	11590	11590		29.551	5.2748	1	39207000	+		19934	18518	13505	13515	22987	22987					0.13930040715968062
KEIFVFVIVVF	11	Unmodified	_KEIFVFVIVVF_					0	0	0			REV__ENSG00000122863|ENST00000373115|CHST3	REV__ENSG00000122863|ENST00000373115|CHST3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.27288818359375	3	447.272325	1338.79515	-1.7854	-0.00079855	3.0485	0.0013635	1.2631	0.00056494	447.27362843006824	106.96	1.1721	107.02	106.47	107.64	0.053757					124	27	6	0	0	0	0.74405	2	11408	11372;11408		23.378	1.4295	1	15545000	+		19935	18518	13505	13515	22988;22989	22989					0.13930040715968062
KEIGDVENW	9	Unmodified	_KEIGDVENW_					0	0	0		nc|ENSG00000135441|P78537-2|BLOC1S1;ENSG00000135441|ENST00000548925|BLOC1S1	nc|ENSG00000135441|P78537-2|BLOC1S1	nc|ENSG00000135441|P78537-2|BLOC1S1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.2655029296875	2	545.264196	1088.51384	-0.25462	-0.00013883	-0.1898	-0.00010349	-0.44442	-0.00024233	545.2639698481355	52.782	0.64312	52.779	52.51	53.153	-0.0033035					32	18	2	0	0	0	0.29259	1	4592	4592		65.465	5.3471	1	171760			19936	4020	13506	13516	22990	22990					-0.026877416616798655
KEIHIKKHK	9	Unmodified	_KEIHIKKHK_					0	0	0			REV__nc|ENSG00000198521|P17038-2|ZNF43	REV__nc|ENSG00000198521|P17038-2|ZNF43	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8645629882812	2	580.866757	1159.71896	-1.8878	-0.0010966	0.45517	0.00026439	-1.4326	-0.00083216	580.8667247469302	62.592	1.1317	62.98	62.183	63.315	0.38779					63	25	4	0	0	0	0.58668	1	6713	6713		47.657	5.2612	1	930800	+		19937	15693	13507	13517	22991	22991					0.14549081659220064
KEIIILSCV	9	Unmodified	_KEIIILSCV_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-7|ZGRF1;nc|ENSG00000138658|Q86YA3-2|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.3059387207031	2	509.304278	1016.594	-0.05438	-2.7696E-05	3.0051	0.0015305	2.9508	0.0015028	509.3056675667054	93.221	1.5935	93.291	92.756	94.349	0.06987					113	37	4	0	0	0	0.7932	1	9701	9701		26.693	1.2427	1	2872400			19938	4314	13508	13518	22992	22992					0.08637028407838443
KEIIILSCV	9	Unmodified	_KEIIILSCV_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-7|ZGRF1;nc|ENSG00000138658|Q86YA3-2|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.3056640625	2	509.304278	1016.594	1.9599	0.00099817	0.96597	0.00049197	2.9258	0.0014901	509.30464157571356	93.196	1.6755	93.134	92.591	94.267	-0.06144					130	39	5	0	0	0	0.77244	2	9875	9875;9899		32.812	2.4355	1	3032400			19939	4314	13508	13518	22993;22994	22993					0.08637028407838443
KEIIILSCV	9	Unmodified	_KEIIILSCV_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-7|ZGRF1;nc|ENSG00000138658|Q86YA3-2|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.30560302734375	2	509.304278	1016.594	0.38214	0.00019463	2.5317	0.0012894	2.9139	0.001484	509.30545060509706	93	1.7659	93.046	92.369	94.135	0.045448					129	41	4	0	0	0	0.76255	1	9757	9757		35.618	0	1	3009900			19940	4314	13508	13518	22995	22995					0.08637028407838443
KEIIKKVIPSA	11	Unmodified	_KEIIKKVIPSA_					0	0	0			REV__ENST00000509101.1_1_4:74735175-74735707:+|nuORF	REV__ENST00000509101.1_1_4:74735175-74735707:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.87939453125	2	613.397556	1224.78056	1.1786	0.00072294	2.1801	0.0013373	3.3587	0.0020602	613.3995535036976	104.46	0.30679	104.63	104.46	104.77	0.17096					9	7	2	0	0	0	0.15701	1	11076	11076		63.534	44.43	1	216270	+		19941	20964	13509	13519	22996	22996					0.17715968567858909
KEIKLTQVF	9	Unmodified	_KEIKLTQVF_					0	0	0			REV__ENSG00000081870|ENST00000194214|IFT25	REV__ENSG00000081870|ENST00000194214|IFT25	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3323974609375	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.77696	1	9773	9773		31.53	3.6476	1	2365500	+		19942	16828	13510	13520	22997	22997					0.10615462062560255
KEIKLTQVF	9	Unmodified	_KEIKLTQVF_					0	0	0			REV__ENSG00000081870|ENST00000194214|IFT25	REV__ENSG00000081870|ENST00000194214|IFT25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.332763671875	2	553.334424	1104.6543	0.28517	0.0001578	-3.9073	-0.002162	-3.6221	-0.0020042	553.3321125200671	96.704	2.3133	96.935	96.395	98.708	0.23103					137	53	4	0	0	0	0.75725	1	10015	10015		36.447	2.2742	1	3367100	+		19943	16828	13510	13520	22998	22998					0.10615462062560255
KEIKLTQVF	9	Unmodified	_KEIKLTQVF_					0	0	0			REV__ENSG00000081870|ENST00000194214|IFT25	REV__ENSG00000081870|ENST00000194214|IFT25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.33251953125	2	553.334424	1104.6543	0.81959	0.00045351	-4.4582	-0.0024669	-3.6386	-0.0020134	553.3317918445606	96.793	1.7474	96.956	96.403	98.15	0.16317					118	40	4	0	0	0	0.77696	1	9999	9999		31.53	2.3803	1	2701500	+		19944	16828	13510	13520	22999	22999					0.10615462062560255
KEIKLTQVF	9	Unmodified	_KEIKLTQVF_					0	0	0			REV__ENSG00000081870|ENST00000194214|IFT25	REV__ENSG00000081870|ENST00000194214|IFT25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.3325805664062	2	553.334424	1104.6543	0.80706	0.00044658	-4.3792	-0.0024232	-3.5722	-0.0019766	553.3318451739801	96.663	1.8533	97.067	96.582	98.436	0.40451					128	44	4	0	0	0	0.75725	1	11634	11634		36.447	7.2767	1	3116400	+		19945	16828	13510	13520	23000	23000					0.10615462062560255
KEILFYDRIL	10	Unmodified	_KEILFYDRIL_					0	0	0		ENSG00000037474|ENST00000264670|NSUN2;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2	ENSG00000037474|ENST00000264670|NSUN2	ENSG00000037474|ENST00000264670|NSUN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2568664550781	3	437.255334	1308.74417	0.72446	0.00031677	3.8859	0.0016991	4.6103	0.0020159	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.86776	1	10298	10298		26.75	2.4738	1	670840			19946	908	13511	13521	23001	23001					0.10215091671125265
KEINALQWEI	10	Unmodified	_KEINALQWEI_					0	0	0		nc|ENSG00000183323|Q86Z20-2|CCDC125;ENSG00000183323|ENST00000396496|CCDC125	nc|ENSG00000183323|Q86Z20-2|CCDC125	nc|ENSG00000183323|Q86Z20-2|CCDC125	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3369750976562	2	622.337695	1242.66084	0.74466	0.00046343	-2.6768	-0.0016659	-1.9322	-0.0012025	622.3359336056161	110.94	1.6886	110.97	110.28	111.96	0.031738					155	57	4	0	0	0	0.8608	1	12223	12223		34.173	7.4796	1	299380			19947	7523	13512	13522	23002	23002					0.0492135522326862
KEIPALAKEVI	11	Unmodified	_KEIPALAKEVI_					0	0	0			REV__ENSG00000136929|ENST00000616898|HEMGN	REV__ENSG00000136929|ENST00000616898|HEMGN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	605.8718872070312	2	605.873914	1209.73327	-0.19668	-0.00011917	-2.8075	-0.001701	-3.0042	-0.0018201	605.8720562136382	100.58	1.534	100.58	100.08	101.62	0					94	35	4	0	0	0	0.75544	1	10242	10242		20.837	0.84038	1	971210	+		19948	19348	13513	13523	23003	23003					0.13679689296850484
KEITKIRE	8	Unmodified	_KEITKIRE_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|138|3|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|138|3|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|138|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.8055725097656	2	508.808574	1015.60259	-0.055037	-2.8003E-05	-1.6702	-0.00084983	-1.7253	-0.00087783	508.8076940504988	90.104	1.2492	90.172	89.514	90.764	0.068703					64	28	4	0	0	0	0.87064	1	9205	9205		29.15	1.2673	1	1111600			19949	14689	13514	13524	23004	23004					0.09541718368666352
KEITMIVIA	9	Unmodified	_KEITMIVIA_					0	0	0		ENSG00000150269|ENST00000279791|OR5M9	ENSG00000150269|ENST00000279791|OR5M9	ENSG00000150269|ENST00000279791|OR5M9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.3057861328125	2	509.304278	1016.594	-0.05438	-2.7696E-05	3.0051	0.0015305	2.9508	0.0015028	509.3056675667054	93.221	1.5935	93.291	92.756	94.349	0.06987					113	37	4	0	0	0	0.71772	1	9642	9642		39.253	5.0803	1	2872400			19950	5060	13515	13525	23005	23005					0.08637028407827074
KEITMIVIA	9	Unmodified	_KEITMIVIA_					0	0	0		ENSG00000150269|ENST00000279791|OR5M9	ENSG00000150269|ENST00000279791|OR5M9	ENSG00000150269|ENST00000279791|OR5M9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.30560302734375	2	509.304278	1016.594	1.9599	0.00099817	0.96597	0.00049197	2.9258	0.0014901	509.30464157571356	93.196	1.6755	93.134	92.591	94.267	-0.06144					130	39	5	0	0	0	0.77696	1	9863	9863		31.53	0	1	3032400			19951	5060	13515	13525	23006	23006					0.08637028407827074
KEITMIVIA	9	Unmodified	_KEITMIVIA_					0	0	0		ENSG00000150269|ENST00000279791|OR5M9	ENSG00000150269|ENST00000279791|OR5M9	ENSG00000150269|ENST00000279791|OR5M9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.30560302734375	2	509.304278	1016.594	0.38214	0.00019463	2.5317	0.0012894	2.9139	0.001484	509.30545060509706	93	1.7659	93.046	92.369	94.135	0.045448					129	41	4	0	0	0	0.77696	1	9722	9722		31.53	3.6476	1	3009900			19952	5060	13515	13525	23007	23007					0.08637028407827074
KEITSRPGQ	9	Unmodified	_KEITSRPGQ_					0	0	0			REV__nc|ENSG00000198910|P32004-3|L1CAM	REV__nc|ENSG00000198910|P32004-3|L1CAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2801513671875	2	508.28018	1014.54581	0.65224	0.00033152	-0.58773	-0.00029873	0.064515	3.2792E-05	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.70638	1	10323	10323		40.058	2.2467	1	1819500	+		19953	23411	13516	13526	23008	23008					0.039116708121468946
KEIWLLVDHL	10	Unmodified	_KEIWLLVDHL_					0	0	0		nc|ENSG00000122126|Q01968-2|OCRL;ENSG00000122126|ENST00000371113|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3687744140625	2	633.366256	1264.71796	2.3091	0.0014625	2.2296	0.0014121	4.5387	0.0028746	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.83456	1	11906	11906		40.778	4.3314	1	10333000			19954	3211	13517	13527	23009	23009					0.0961882249964674
KEKDKDKERPK	11	Unmodified	_KEKDKDKERPK_					0	0	0			REV__nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	REV__nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7821350097656	3	467.600052	1399.77833	-1.2684	-0.00059308	-3.3123	-0.0015488	-4.5806	-0.0021419	467.93274952060386	29.891	0.52542	29.919	29.748	30.274	0.028618					18	11	2	0	0	0	0.17422	1	1958	1958		28.384	5.0059	1	50989	+		19955	23457	13518	13528	23010	23010					0.09442888092075918
KEKELRQLRL	10	Unmodified	_KEKELRQLRL_					0	0	0		nc|ENSG00000178104|Q5VU43-6|PDE4DIP;nc|ENSG00000178104|Q5VU43-7|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43-2|PDE4DIP;nc|ENSG00000178104|Q5VU43-13|PDE4DIP	nc|ENSG00000178104|Q5VU43-6|PDE4DIP;nc|ENSG00000178104|Q5VU43-13|PDE4DIP	nc|ENSG00000178104|Q5VU43-13|PDE4DIP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.27301025390625	3	438.273499	1311.79867	-0.96199	-0.00042161	-0.26536	-0.0001163	-1.2273	-0.00053791	438.2732841967114	107.57	0.99143	107.57	106.84	107.83	0					91	23	5	0	0	0	0.86621	1	11104	11104		26.063	1.8316	1	3871200			19956	7183;15120	13519	13529	23011	23011					0.15524103542543344
KEKGKTAF	8	Unmodified	_KEKGKTAF_					0	0	0		nc|ENSG00000205097|Q64ET8|FRG2;ENSG00000225899|ENST00000425520|FRG2B;ENSG00000205097|ENST00000504750|FRG2	nc|ENSG00000205097|Q64ET8|FRG2	nc|ENSG00000205097|Q64ET8|FRG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.76300048828125	2	454.763635	907.512717	-0.87729	-0.00039896	0.10816	4.9188E-05	-0.76913	-0.00034977	454.76364990871195	47.486	0.78397	48.409	48.12	48.904	0.92315					52	19	4	0	0	0	0.9295	1	4538	4538		55.504	5.4797	1	6225300			19957	8510	13520	13530	23012	23012					0.055260887600866226
KEKGPLVLPSV	11	Unmodified	_KEKGPLVLPSV_					0	0	0			REV__ENST00000413818.2_1_20:45981938-45982076:+|nuORF	REV__ENST00000413818.2_1_20:45981938-45982076:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.858154296875	2	583.860806	1165.70706	-0.80585	-0.00047051	-2.4571	-0.0014346	-3.263	-0.0019051	583.8591949944405	98.804	2.4153	98.854	98.351	100.77	0.049828					137	55	4	0	0	0	0.70584	1	10479	10479		30.569	3.876	1	1986800	+		19958	26398	13521	13531	23013	23013					0.1308342012534922
KEKIEGVIH	9	Unmodified	_KEKIEGVIH_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.80859375	2	526.808574	1051.60259	-0.037043	-1.9515E-05	-0.93631	-0.00049326	-0.97335	-0.00051277	526.8079411043393	101.16	2.0772	101.19	100.26	102.33	0.031029					128	48	4	0	0	0	0.22631	1	10784	10784		71.296	2.5089	1	2562600	+		19959	17348	13522	13532	23014	23014					0.07885718368675043
KEKIEGVIH	9	Unmodified	_KEKIEGVIH_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.808349609375	2	526.808574	1051.60259	0.8285	0.00043646	-1.654	-0.00087134	-0.82549	-0.00043488	526.8075886317766	100.77	1.8367	100.92	100.51	102.34	0.14352					113	44	4	0	0	0	0.15928	1	10526	10526		82.305	16.502	1	2715400	+		19960	17348	13522	13532	23015	23015					0.07885718368675043
KEKIEGVIH	9	Unmodified	_KEKIEGVIH_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8084106445312	2	526.808574	1051.60259	2.0771	0.0010942	-3.8443	-0.0020252	-1.7672	-0.00093099	526.8065947880607	99.033	1.2732	99.395	98.525	99.798	0.36137					108	31	5	0	0	0	0.22631	1	11944	11944		71.296	2.5089	1	32054000	+		19961	17348	13522	13532	23016	23016					0.07885718368675043
KEKIEGVIH	9	Unmodified	_KEKIEGVIH_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8084716796875	2	526.808574	1051.60259	2.1591	0.0011374	-4.2531	-0.0022406	-2.0941	-0.0011032	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.35373	2	12196	12184;12196		60.972	3.1607	1	36320000	+		19962	17348	13522	13532	23017;23018	23018					0.07885718368675043
KEKIEGVIH	9	Unmodified	_KEKIEGVIH_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8079833984375	2	526.808574	1051.60259	1.4964	0.00078833	-3.5562	-0.0018734	-2.0598	-0.0010851	526.8069621242416	97.94	1.6392	98.317	97.185	98.824	0.37678					70	34	4	0	0	0	0.22631	1	11847	11847		71.296	2.5089	1	2595400	+		19963	17348	13522	13532	23019	23019					0.07885718368675043
KEKIEGVIH	9	Unmodified	_KEKIEGVIH_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8084106445312	2	526.808574	1051.60259	2.1723	0.0011444	-3.985	-0.0020993	-1.8127	-0.00095493	526.806498827833	99.792	0.95116	100.16	99.637	100.59	0.36292					61	16	4	0	0	0	0.22631	2	12114	12114;12139		71.296	2.811	1	16717000	+		19964	17348	13522	13532	23020;23021	23020					0.07885718368675043
KEKIEGVIH	9	Unmodified	_KEKIEGVIH_					0	0	0			REV__ENSG00000102699|ENST00000381989|PARP4	REV__ENSG00000102699|ENST00000381989|PARP4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	526.808574	1051.60259	-0.10387	-5.4722E-05	-6.0133	-0.0031678	-6.1172	-0.0032226	527.3062032840483	97.886	0.95136	98.114	97.529	98.48	0.22787	-0.11976	-0.0020887	NaN	71.296	33	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	643360	+		19965	17348	13522	13532							0.07885718368675043
KEKIGNRCV	9	Unmodified	_KEKIGNRCV_					0	0	0			REV__ENST00000531064.5_1_8:70476378-70501346:+|nuORF	REV__ENST00000531064.5_1_8:70476378-70501346:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7939453125	2	523.792401	1045.57025	1.1929	0.00062481	1.6583	0.00086859	2.8511	0.0014934	523.7931742755334	19.706	1.4854	19.236	18.928	20.414	-0.46967					77	32	3	0	0	0	0.7932	1	631	631		21.96	1.013	1	1002100	+		19966	19393	13523	13533	23022	23022					0.04928607694000675
KEKIIKKFEC	10	Unmodified	_KEKIIKKFEC_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-7|IFT122;nc|ENSG00000163913|Q9HBG6-8|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5820007324219	3	422.581053	1264.72133	0.70592	0.00029831	1.5281	0.00064575	2.234	0.00094406	422.58159999345827	97.435	2.4101	97.596	96.789	99.199	0.16074					159	55	4	0	0	0	0.86718	1	10157	10157		20.03	0	1	461560			19967	5881	13524	13534	23023	23023					0.09955749282039505
KEKKEKKTT	9	Unmodified	_KEKKEKKTT_					0	0	0		ENST00000303391.10_2_X:153289994-153290270:-|nuORF	ENST00000303391.10_2_X:153289994-153290270:-|nuORF	ENST00000303391.10_2_X:153289994-153290270:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3403930664062	2	560.340238	1118.66592	3.1431	0.0017612	-2.7829	-0.0015594	0.36025	0.00020187	560.3385698179089	105.88	1.8636	105.84	105.1	106.97	-0.03714					103	43	3	0	0	0	0.77244	1	11778	11778		32.812	1.2826	1	1086900			19968	9833	13525	13535	23024	23024					0.11133659085885483
KEKKEKKTT	9	Unmodified	_KEKKEKKTT_					0	0	0		ENST00000303391.10_2_X:153289994-153290270:-|nuORF	ENST00000303391.10_2_X:153289994-153290270:-|nuORF	ENST00000303391.10_2_X:153289994-153290270:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3404541015625	2	560.340238	1118.66592	1.3346	0.00074785	-1.2881	-0.00072176	0.046576	2.6098E-05	560.3393959922291	89.415	3.8062	89.464	86.947	90.753	0.048157					198	89	4	0	0	0	0.78983	1	9247	9247		27.882	2.3082	1	1103500			19969	9833	13525	13535	23025	23025					0.11133659085885483
KEKKEKKTT	9	Unmodified	_KEKKEKKTT_					0	0	0		ENST00000303391.10_2_X:153289994-153290270:-|nuORF	ENST00000303391.10_2_X:153289994-153290270:-|nuORF	ENST00000303391.10_2_X:153289994-153290270:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3397827148438	2	560.340238	1118.66592	0.37477	0.00021	-0.52991	-0.00029693	-0.15514	-8.6932E-05	560.3398544470892	89.255	3.3389	89.463	87.161	90.5	0.2073					181	78	4	0	0	0	0.73802	1	8936	8936		37.812	6.2817	1	715790			19970	9833	13525	13535	23026	23026					0.11133659085885483
KEKKKKHRKHK	11	Unmodified	_KEKKKKHRKHK_					0	0	0		ENST00000592262.1_1_19:33604586-33621063:+|nuORF;ENSG00000076650|ENST00000170564|GPATCH1	ENST00000592262.1_1_19:33604586-33621063:+|nuORF	ENST00000592262.1_1_19:33604586-33621063:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.322021484375	3	492.319554	1473.93683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.09	1	16.01	15.51	16.51	-0.080017								0	0	0	0.56276	1	79	79		9.6461	3.9474	1				19971	1362	13526	13536	23027	23027					0.21882271581671375
KEKKKKKKKIF	11	Unmodified	_KEKKKKKKKIF_					0	0	0			REV__ENST00000367142.4_1_1:205687259-205687394:-|nuORF	REV__ENST00000367142.4_1_1:205687259-205687394:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.66015625	3	478.329056	1431.96534	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.81	1	73.937	73.437	74.437	0.12711								0	0	0	0.56276	1	6794	6794		1.3219	0.95051	1		+		19972	25551	13527	13537	23028	23028					0.2666357643824995
KEKKKKKKKIF	11	Unmodified	_KEKKKKKKKIF_					0	0	0			REV__ENST00000367142.4_1_1:205687259-205687394:-|nuORF	REV__ENST00000367142.4_1_1:205687259-205687394:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.3265686035156	3	478.329056	1431.96534	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.605	1	74.732	74.232	75.232	0.12711								0	0	0	0.56276	1	6903	6903		1.3219	0	1		+		19973	25551	13527	13537	23029	23029					0.2666357643824995
KEKKKKKKKIF	11	Unmodified	_KEKKKKKKKIF_					0	0	0			REV__ENST00000367142.4_1_1:205687259-205687394:-|nuORF	REV__ENST00000367142.4_1_1:205687259-205687394:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.32757568359375	3	478.329056	1431.96534	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.911	1	74.999	74.499	75.499	0.087357								0	0	0	0.56276	1	6916	6916		8.7993	7.4774	1		+		19974	25551	13527	13537	23030	23030					0.2666357643824995
KEKKKKKKKIF	11	Unmodified	_KEKKKKKKKIF_					0	0	0			REV__ENST00000367142.4_1_1:205687259-205687394:-|nuORF	REV__ENST00000367142.4_1_1:205687259-205687394:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.3276062011719	3	478.329056	1431.96534	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.266	1	73.654	73.154	74.154	0.38779								0	0	0	0.56276	1	8215	8215		1.523	0.20106	1		+		19975	25551	13527	13537	23031	23031					0.2666357643824995
KEKKQRNIKH	10	Unmodified	_KEKKQRNIKH_					0	0	0		ENST00000078429.8_1_19:3121173-3121524:+|nuORF	ENST00000078429.8_1_19:3121173-3121524:+|nuORF	ENST00000078429.8_1_19:3121173-3121524:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.9336853027344	3	436.933477	1307.7786	0.27454	0.00011996	0.84307	0.00036836	1.1176	0.00048832	436.9337888157145	20.681	2.5222	20.051	19.49	22.012	-0.62961					153	62	4	0	0	0	0.86802	1	763	763		27.047	3.6694	1	646260			19976	9076	13528	13538	23032	23032					0.13702352602581414
KEKKREDIYIR	11	Unmodified	_KEKKREDIYIR_					0	0	0		ENSG00000147459|ENST00000276440|DOCK5;ENST00000467709.6_1_8:25227083-25246387:+|nuORF	ENSG00000147459|ENST00000276440|DOCK5	ENSG00000147459|ENST00000276440|DOCK5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.6241760253906	3	493.287697	1476.84126	0.16292	8.0368E-05	-2.3174	-0.0011431	-2.1545	-0.0010628	493.62092484877275	30.426	0.95694	30.538	30.206	31.163	0.11225					113	46	5	0	0	0	0.79224	1	1339	1339		12.957	3.3113	1	371460			19977	4904	13529	13539	23033	23033					0.1219145388013203
KEKLNFGAF	9	Unmodified	_KEKLNFGAF_					0	0	0			REV__ENSG00000164038|ENST00000394785|SLC9B2	REV__ENSG00000164038|ENST00000394785|SLC9B2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.75537109375	2	527.290017	1052.56548	0.27051	0.00014264	-3.9031	-0.0020581	-3.6326	-0.0019154	527.2877467311699	20.443	0.49452	19.813	19.536	20.03	-0.6296					16	10	2	0	0	0	0.20789	1	679	679		15.642	0	1	50108	+		19978	21012	13530	13540	23034	23034					0.04130046822888289
KEKNYTKQRRK	11	Unmodified	_KEKNYTKQRRK_					0	0	0			REV__chr19:56824514-56836018|39|11.51|0.17|6.04|-|ENST00000647621|ZIM2,ZIM2	REV__chr19:56824514-56836018|39|11.51|0.17|6.04|-|ENST00000647621|ZIM2,ZIM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.62115478515625	3	493.623191	1477.84774	-1.8007	-0.00088885	-2.5964	-0.0012816	-4.397	-0.0021705	493.6218802691259	31.167	0.9176	31.167	30.72	31.638	0					75	31	3	0	0	0	0.7896	1	1485	1485		13.508	3.404	1	50794	+		19979	15723	13531	13541	23035	23035					0.12793391831451117
KEKRHLRKARR	11	Unmodified	_KEKRHLRKARR_					0	0	0		ENSG00000146909|ENST00000275820|NOM1	ENSG00000146909|ENST00000275820|NOM1	ENSG00000146909|ENST00000275820|NOM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.6210021972656	3	493.314803	1476.92258	0.4036	0.0001991	-3.0021	-0.001481	-2.5985	-0.0012819	493.313157733505	30.66	0.15897	30.657	30.565	30.724	-0.0022545					12	7	3	0	0	0	0.17996	1	1360	1360		12.433	7.0199	1	52971			19980	4869	13532	13542	23036	23036					0.20319619153383428
KEKRSFRR	8	Unmodified	_KEKRSFRR_					0	0	0			REV__nc|ENSG00000122678|Q9NP87-2|POLM	REV__nc|ENSG00000122678|Q9NP87-2|POLM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8307495117188	2	553.830706	1105.64686	3.334	0.0018465	-4.1558	-0.0023016	-0.8218	-0.00045514	553.8282134205963	102.58	0.81242	102.53	102.22	103.03	-0.047005					43	19	3	0	0	0	0.87922	1	11244	11244		31.955	1.4512	1	563570	+		19981	18508	13533	13543	23037	23037					0.09826167305527633
KEKTHTRQH	9	Unmodified	_KEKTHTRQH_					0	0	0			REV__ENST00000430298.6_1_19:12222347-12224207:+|nuORF;REV__ENSG00000136866|ENST00000374227|ZFP37	REV__ENSG00000136866|ENST00000374227|ZFP37	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8045654296875	2	582.815253	1163.61595	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.98	1	113.91	113.41	114.41	-0.07								0	0	0	0.32758	1	12342	12342		20.947	0.95016	1		+		19982	19342;26599	13534	13544	23038	23038					0.04068969200579886
KEKVHHRK	8	Unmodified	_KEKVHHRK_					0	0	0		nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;ENSG00000008128|ENST00000404249|CDK11A;ENST00000598846.1_1_1:1636463-1654047:-|nuORF;nc|ENSG00000008128|Q9UQ88|CDK11A	nc|ENSG00000008128|Q9UQ88-9|CDK11A	nc|ENSG00000008128|Q9UQ88-9|CDK11A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.3187255859375	2	531.319974	1060.6254	-0.04293	-2.281E-05	-1.1073	-0.00058834	-1.1503	-0.00061115	531.3190516758626	94.867	1.8687	95.098	94.611	96.479	0.23103					163	44	5	0	0	0	0.86677	1	9762	9762		27.882	0	1	2940800			19983	736	13535	13545	23039	23039					0.09750782276796599
KEKVLATK	8	Unmodified	_KEKVLATK_					0	0	0			REV__ENSG00000182793|ENST00000370989|GSTA5	REV__ENSG00000182793|ENST00000370989|GSTA5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.78228759765625	2	458.794935	915.575317	0.04135	1.8971E-05	3.0978	0.0014213	3.1392	0.0014402	458.79628331325847	20.738	0.26441	20.814	20.719	20.983	0.075848					19	12	2	0	0	0	0.4002	1	527	527		90.37	2.6155	1	112870	+		19984	22552	13536	13546	23040	23040					0.11415234828280063
KEKVNEKPLG	10	Unmodified	_KEKVNEKPLG_					0	0	0		nc|ENSG00000137216|Q5T3F8-3|TMEM63B;ENSG00000137216|ENST00000323267|TMEM63B;nc|ENSG00000137216|Q5T3F8-2|TMEM63B;ENST00000534326.5_1_6:44102273-44116742:+|nuORF	nc|ENSG00000137216|Q5T3F8-3|TMEM63B	nc|ENSG00000137216|Q5T3F8-3|TMEM63B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3309936523438	2	571.332413	1140.65027	0.55864	0.00031917	-3.1127	-0.0017784	-2.554	-0.0014592	571.3306168800059	102.04	2.573	102.24	101.51	104.08	0.19484					133	63	4	0	0	0	0.86763	1	10760	10760		26.693	3.6504	1	4021100			19985	4181	13537	13547	23041	23041					0.08557372568861865
KEKVSEKLKSA	11	Unmodified	_KEKVSEKLKSA_					0	0	0			REV__nc|ENSG00000039560|Q9P0K7-4|RAI14	REV__nc|ENSG00000039560|Q9P0K7-4|RAI14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	623.871337890625	2	623.871902	1245.72925	-0.25925	-0.00016174	-2.1497	-0.0013411	-2.409	-0.0015029	623.8704556455313	104.73	1.8693	104.71	104.28	106.15	-0.014809					121	44	4	0	0	0	0.732	1	11329	11329		26.063	1.5442	1	1315900	+		19986	29683	13538	13548	23042	23042					0.11621599803129357
KEKYIDQEEL	10	Unmodified	_KEKYIDQEEL_					0	0	0		ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000224411|Q14568|HSP90AA2P;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;nc|ENSG00000205940|Q58FF8|HSP90AB2P	ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	647.8297729492188	2	647.8299	1293.64525	-1.2565	-0.00081401	0.86896	0.00056294	-0.38756	-0.00025107	647.8302955781977	39.385	1.0936	39.753	39.299	40.393	0.36797					79	25	4	0	0	0	8.8367E-17	4	3302	3290;3302;3314;3327		169.65	51.841	1	3101200			19987	1452	13539	13549	23043;23044;23045;23046	23044					0.010170239155968375
KEKYIDQEEL	10	Unmodified	_KEKYIDQEEL_					0	0	0		ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000224411|Q14568|HSP90AA2P;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;nc|ENSG00000205940|Q58FF8|HSP90AB2P	ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	647.82958984375	2	647.8299	1293.64525	0.43367	0.00028094	-0.43686	-0.00028301	-0.0031918	-2.0678E-06	647.8294862610643	39.23	1.537	39.785	39.026	40.563	0.55449					92	35	4	0	0	0	1.9859E-12	4	3308	3284;3296;3308;3320		166.07	56.593	1	1979700			19988	1452	13539	13549	23047;23048;23049;23050	23049					0.010170239155968375
KEKYLGIISI	10	Unmodified	_KEKYLGIISI_					0	0	0			REV__ENSG00000133401|ENST00000438447|PDZD2	REV__ENSG00000133401|ENST00000438447|PDZD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353759765625	2	582.355357	1162.69616	0.055419	3.2273E-05	-2.3905	-0.0013921	-2.3351	-0.0013599	582.3539492159867	15.513	0.1927	15.433	15.321	15.514	-0.080017					17	7	3	0	0	0	0.54701	1	34	34		52.937	11.51	1	333590	+		19989	19076	13540	13550	23051	23051					0.12132017751082458
KELAPLKY	8	Unmodified	_KELAPLKY_					0	0	0		nc|ENSG00000159625|Q8IY82-2|DRC7;ENSG00000159625|ENST00000360716|DRC7	nc|ENSG00000159625|Q8IY82-2|DRC7	nc|ENSG00000159625|Q8IY82-2|DRC7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.80084228515625	2	481.289485	960.564418	-1.6759	-0.00080658	0.66591	0.00032049	-1.01	-0.00048609	481.2903473083383	95.101	0.2838	95.304	95.232	95.515	0.20242					8	6	2	0	0	0	0.4196	1	9686	9686		31.955	0	1	59173			19990	5539	13541	13551	23052	23052					0.08255832453994572
KELEAIKAM	9	Unmodified	_KELEAIKAM_					0	0	0			REV__ENSG00000184922|ENST00000331495|FMNL1	REV__ENSG00000184922|ENST00000331495|FMNL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7933349609375	2	516.791535	1031.56852	0.82179	0.0004247	2.9641	0.0015318	3.7859	0.0019565	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.76255	1	9013	9013		35.618	4.0885	1	858640	+		19991	22711	13542	13552	23053	23053					0.053995538853769176
KELFVKKNN	9	Unmodified	_KELFVKKNN_					0	0	0			REV__nc|ENSG00000150867|P48426-2|PIP4K2A	REV__nc|ENSG00000150867|P48426-2|PIP4K2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3217163085938	2	560.329673	1118.64479	0.001873	1.0495E-06	-1.5541	-0.0008708	-1.5522	-0.00086976	560.3286245420572	43.972	0.6899	44.423	44.083	44.773	0.45025					39	16	3	0	0	0	0.21969	1	3994	3994		71.877	1.4789	1	1352200	+		19992	20222	13543	13553	23054	23054					0.09021693777026485
KELIYVVKAS	10	Unmodified	_KELIYVVKAS_					0	0	0			REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.345458984375	2	575.347532	1148.68051	-0.3799	-0.00021857	-2.6981	-0.0015524	-3.078	-0.0017709	575.3459117588899	98.957	2.3582	98.957	98.457	100.82	0					160	56	5	0	0	0	0.86225	3	9950	9940;9950;9996		32.751	4.8683	1	2637800	+		19993	19897	13544	13554	23055;23056;23057	23056					0.11211731234061517
KELIYVVKAS	10	Unmodified	_KELIYVVKAS_					0	0	0			REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.3455810546875	2	575.347532	1148.68051	-1.0089	-0.00058045	0.10463	6.0201E-05	-0.90424	-0.00052025	575.3486096870474	98.837	5.2928	98.887	98.351	103.64	0.04982					239	125	5	0	0	0	0.86225	2	10449	10449;10499		32.751	3.5805	1	4222200	+		19994	19897	13544	13554	23058;23059	23058					0.11211731234061517
KELIYVVKAS	10	Unmodified	_KELIYVVKAS_					0	0	0			REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.3455810546875	2	575.347532	1148.68051	0.97571	0.00056137	-4.2468	-0.0024434	-3.2711	-0.001882	575.3449806461122	98.555	2.3295	98.603	98.055	100.38	0.048157					165	53	5	0	0	0	0.86621	1	10498	10498		26.063	0.48933	1	4316200	+		19995	19897	13544	13554	23060	23060					0.11211731234061517
KELIYVVKAS	10	Unmodified	_KELIYVVKAS_					0	0	0			REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.3451538085938	2	575.347532	1148.68051	0.61456	0.00035358	-3.9136	-0.0022517	-3.299	-0.0018981	575.3451796941858	98.405	2.0882	98.633	98.17	100.26	0.22787					146	48	5	0	0	0	0.86225	3	10234	10176;10234;10246		32.751	4.8683	1	2884500	+		19996	19897	13544	13554	23061;23062;23063	23062					0.11211731234061517
KELIYVVKAS	10	Unmodified	_KELIYVVKAS_					0	0	0			REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.3452758789062	2	575.347532	1148.68051	0.85707	0.00049311	-4.0816	-0.0023483	-3.2245	-0.0018552	575.345131550994	98.458	2.855	98.614	97.622	100.48	0.15659					162	65	5	0	0	0	0.86225	2	10243	10219;10243		32.751	4.669	1	2526400	+		19997	19897	13544	13554	23064;23065	23065					0.11211731234061517
KELIYVVKAS	10	Unmodified	_KELIYVVKAS_					0	0	0			REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.345703125	2	575.347532	1148.68051	0.94019	0.00054093	-3.6496	-0.0020998	-2.7094	-0.0015588	575.3454322863764	98.249	1.7248	98.634	98.18	99.904	0.38548					107	42	5	0	0	0	0.86225	1	11824	11824		32.751	6.6872	1	3140900	+		19998	19897	13544	13554	23066	23066					0.11211731234061517
KELIYVVKAS	10	Unmodified	_KELIYVVKAS_					0	0	0			REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.3455810546875	2	575.347532	1148.68051	1.1925	0.00068607	-4.1745	-0.0024018	-2.982	-0.0017157	575.3450411705345	98.393	1.0962	98.77	98.327	99.423	0.37678					95	26	5	0	0	0	0.86446	1	11892	11892		30.569	3.5215	1	3337700	+		19999	19897	13544	13554	23067	23067					0.11211731234061517
KELKARKIPI	10	Unmodified	_KELKARKIPI_					0	0	0		ENSG00000100142|ENST00000442738|POLR2F	ENSG00000100142|ENST00000442738|POLR2F	ENSG00000100142|ENST00000442738|POLR2F	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3042602539062	2	598.39789	1194.78123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.38	1	114.31	113.81	114.81	-0.07								0	0	0	0.45132	1	12374	12374		10.265	0.5596	1				20000	1802	13545	13555	23068	23068					0.1916280800755885
KELKKNFF	8	Unmodified	_KELKKNFF_					0	0	0		ENST00000575042.1_1_16:3493766-3500111:+|nuORF	ENST00000575042.1_1_16:3493766-3500111:+|nuORF	ENST00000575042.1_1_16:3493766-3500111:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.75537109375	2	527.30821	1052.60187	0.26427	0.00013935	-2.7108	-0.0014295	-2.4466	-0.0012901	527.3067163702759	20.528	0.31241	19.898	19.764	20.076	-0.6296					9	6	2	0	0	0	0.4196	1	679	679		23.042	0	1	13532			20001	14043	13546	13556	23069	23069					0.07766923719600527
KELKLKATELL	11	Unmodified	_KELKLKATELL_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4058227539062	2	643.408121	1284.80169	0.024155	1.5542E-05	-3.2881	-0.0021156	-3.264	-0.0021001	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.67778	1	10982	10982		35.152	7.2698	1	11188000	+		20002	19132	13547	13557	23070	23070					0.17067933876683128
KELKLKATELL	11	Unmodified	_KELKLKATELL_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4054565429688	2	643.408121	1284.80169	2.6791	0.0017238	-4.4011	-0.0028317	-1.722	-0.0011079	643.4052640495355	107.03	1.0145	106.99	106.79	107.81	-0.034134					59	23	3	0	0	0	0.72106	1	11886	11886		28.081	3.5623	1	2103900	+		20003	19132	13547	13557	23071	23071					0.17067933876683128
KELKLKATELL	11	Unmodified	_KELKLKATELL_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4049682617188	2	643.408121	1284.80169	1.777	0.0011433	-3.4166	-0.0021983	-1.6396	-0.0010549	643.4059831518348	106.95	1.1451	106.98	106.72	107.86	0.03688					79	26	4	0	0	0	0.74763	1	11802	11802		22.58	0.61977	1	1597700	+		20004	19132	13547	13557	23072	23072					0.17067933876683128
KELKLKATELL	11	Unmodified	_KELKLKATELL_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4055786132812	2	643.408121	1284.80169	-1.1464	-0.0007376	-2.3724	-0.0015264	-3.5187	-0.002264	643.406459620359	105.63	1.1927	105.7	104.97	106.16	0.073112					153	29	6	0	0	0	0.66929	1	11212	11212		36.447	4.9169	1	22367000	+		20005	19132	13547	13557	23073	23073					0.17067933876683128
KELKLKATELL	11	Unmodified	_KELKLKATELL_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4058837890625	2	643.408121	1284.80169	-1.1464	-0.0007376	-1.6448	-0.0010583	-2.7912	-0.0017959	643.4069214023369	106.26	1.0134	106.32	106.14	107.15	0.053749					110	23	5	0	0	0	0.61369	1	11331	11331		42.864	2.0861	1	13678000	+		20006	19132	13547	13557	23074	23074					0.17067933876683128
KELKLPSYK	9	Unmodified	_KELKLPSYK_					0	0	0		nc|ENSG00000107443|Q5T5M9-2|CCNJ;nc|ENSG00000107443|Q5T5M9|CCNJ;ENSG00000107443|ENST00000465148|CCNJ	nc|ENSG00000107443|Q5T5M9-2|CCNJ	nc|ENSG00000107443|Q5T5M9-2|CCNJ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.332275390625	2	553.334424	1104.6543	0.28517	0.0001578	-3.9073	-0.002162	-3.6221	-0.0020042	553.3321125200671	96.704	2.3133	96.935	96.395	98.708	0.23103					137	53	4	0	0	0	0.68711	1	9976	9976		41.427	3.6151	1	3367100			20007	2345	13548	13558	23075	23075					0.10615462062560255
KELLDVLIPP	10	Unmodified	_KELLDVLIPP_					0	0	0			REV__nc|ENSG00000102710|Q8NEM7-2|SUPT20H	REV__nc|ENSG00000102710|Q8NEM7-2|SUPT20H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.853515625	2	568.849907	1135.68526	2.887	0.0016423	2.6801	0.0015246	5.5671	0.0031668	568.8513377958367	102.33	3.4335	102.28	101.79	105.22	-0.047005					328	82	6	0	0	0	0.85694	2	11458	11181;11458		35.618	2.5999	1	53482000	+		20008	17349	13549	13559	23076;23077	23077					0.12284615376802321
KELLGRSTL	9	Unmodified	_KELLGRSTL_					0	0	0			REV__nc|ENSG00000176974|P34896-4|SHMT1	REV__nc|ENSG00000176974|P34896-4|SHMT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.8064270019531	2	508.808574	1015.60259	1.6039	0.0008161	-3.3912	-0.0017255	-1.7873	-0.00090938	508.80675407438747	90.171	1.1085	90.101	89.611	90.719	-0.069977					56	25	3	0	0	0	0.78912	1	9433	9433		28.081	3.5623	1	1285500	+		20009	22166	13550	13560	23078	23078					0.09541718368666352
KELLNELFKK	10	Unmodified	_KELLNELFKK_					0	0	0			REV__ENSG00000138246|ENST00000260818|DNAJC13	REV__ENSG00000138246|ENST00000260818|DNAJC13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.75531005859375	3	421.255334	1260.74417	1.1494	0.00048421	2.5714	0.0010832	3.7208	0.0015674	421.25640344823444	22.284	1.6998	21.865	20.667	22.367	-0.41879					58	38	3	0	0	0	0.37624	1	880	880		21.686	0.65352	1	147400	+		20010	19452	13551	13561	23079	23079					0.12423091671121256
KELLNELFKK	10	Unmodified	_KELLNELFKK_					0	0	0			REV__ENSG00000138246|ENST00000260818|DNAJC13	REV__ENSG00000138246|ENST00000260818|DNAJC13	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	421.255334	1260.74417	0.022713	9.5678E-06	2.2405	0.00094382	2.2632	0.00095339	421.2556185678921	21.877	0.17372	21.959	21.871	22.045	0.081615	0.046614	-0.00040753	NaN	21.686	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29616	+		20011	19452	13551	13561							0.12423091671121256
KELLRARQPP	10	Unmodified	_KELLRARQPP_					0	0	0			REV__ENSG00000237441|ENST00000497454|RGL2	REV__ENSG00000237441|ENST00000497454|RGL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3665161132812	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.86218	1	11694	11694		32.812	1.2826	1	64334000	+		20012	23797	13552	13562	23080	23080					0.12459876308253115
KELMAQNQP	9	Oxidation (M)	_KELM(Oxidation (M))AQNQP_		KELM(1)AQNQP		KELM(93)AQNQP	0	0	1		ENSG00000012232|ENST00000220562|EXTL3	ENSG00000012232|ENST00000220562|EXTL3	ENSG00000012232|ENST00000220562|EXTL3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.7688598632812	2	537.766049	1073.51754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.691	1	24.177	23.677	24.677	-0.51365								0	0	0	0.040104	1	1219	1219		93.195	18.94	1				20013	800	13553	13563	23081	23081		11			-0.01627395159448497
KELNLVLDEI	10	Unmodified	_KELNLVLDEI_					0	0	0		ENST00000518168.5_1_5:179228470-179228931:-|nuORF;ENST00000520134.1_1_5:179228412-179228937:-|nuORF;nc|ENSG00000161013|Q9UQ53-2|MGAT4B;ENSG00000161013|ENST00000292591|MGAT4B;nc|ENSG00000161013|Q9UQ53-3|MGAT4B	ENST00000518168.5_1_5:179228470-179228931:-|nuORF	ENST00000518168.5_1_5:179228470-179228931:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	593.34423828125	2	593.339904	1184.66525	3.3538	0.0019899	4.0959	0.0024302	7.4496	0.0044202	593.3422294286001	103.53	2.4934	103.48	103.12	105.61	-0.043755					162	59	4	0	0	0	0.86471	1	11381	11381		30.318	3.6248	1	2080000			20014	5625	13554	13564	23082	23082					0.080308196462056
KELNTIEFLH	10	Unmodified	_KELNTIEFLH_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3360595703125	2	622.337695	1242.66084	0.74466	0.00046343	-2.6768	-0.0016659	-1.9322	-0.0012025	622.3359336056161	110.94	1.6886	110.97	110.28	111.96	0.031738					155	57	4	0	0	0	0.86272	1	12209	12209		24.519	3.5723	1	299380	+		20015	18979	13555	13565	23083	23083					0.04921355223291357
KELNWIKVLPN	11	Unmodified	_KELNWIKVLPN_					0	0	0			REV__nc|ENSG00000160695|Q9H270|VPS11	REV__nc|ENSG00000160695|Q9H270|VPS11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.93255615234375	3	451.934484	1352.78162	-1.2099	-0.00054677	-2.7663	-0.0012502	-3.9762	-0.001797	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.75457	1	10497	10497		21.032	2.5012	1	1176100	+		20016	20731	13556	13566	23084	23084					0.11934182936761317
KELPQYRAP	9	Unmodified	_KELPQYRAP_					0	0	0		ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A	ENSG00000042781|ENST00000307340|USH2A	ENSG00000042781|ENST00000307340|USH2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.3058471679688	2	551.306198	1100.59784	-0.34137	-0.0001882	0.30277	0.00016692	-0.038596	-2.1278E-05	551.3061719414285	63.787	0.76929	63.814	63.476	64.246	0.027142					59	24	4	0	0	0	0.18601	1	5987	5987		76.774	2.5191	1	504530			20017	938	13557	13567	23085	23085					0.051568342258860866
KELPVRLH	8	Unmodified	_KELPVRLH_					0	0	0			REV__ENSG00000079387|ENST00000549518|SENP1	REV__ENSG00000079387|ENST00000549518|SENP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	496.3044738769531	2	496.306001	990.597449	-0.5818	-0.00028875	-3.5963	-0.0017849	-4.1781	-0.0020736	496.30410595026353	84.014	3.2455	84.179	83.276	86.522	0.1651					146	75	3	0	0	0	0.82658	1	8204	8204		21.96	0	1	213760	+		20018	16783	13558	13568	23086	23086					0.10177459296698999
KELPYKVC	8	Unmodified	_KELPYKVC_					0	0	0			REV__nc|ENSG00000108582|O75976-2|CPD	REV__nc|ENSG00000108582|O75976-2|CPD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.26763916015625	2	490.267696	978.520839	0.64647	0.00031694	0.64992	0.00031864	1.2964	0.00063558	490.26800757881944	83.964	3.3049	84.112	83.013	86.318	0.14793					138	76	2	0	0	0	0.884	1	8250	8250		33.516	1.5607	1	246750	+		20019	17722	13559	13569	23087	23087					0.030718996852101554
KELQKGPFV	9	Unmodified	_KELQKGPFV_					0	0	0			REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035278320312	2	523.305667	1044.59678	-0.79828	-0.00041774	-3.1608	-0.0016541	-3.9591	-0.0020718	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.78536	1	8598	8598		29.15	1.2673	1	9288900	+		20020	26054	13560	13570	23088	23088					0.0762661985700106
KELQKGPFV	9	Unmodified	_KELQKGPFV_					0	0	0			REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.78536	2	8739	8739;8980		29.15	1.2673	1	12189000	+		20021	26054	13560	13570	23089;23090	23089					0.0762661985700106
KELQKGPFV	9	Unmodified	_KELQKGPFV_					0	0	0			REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	REV__ENST00000393357.6_1_1:114301314-114301644:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3037109375	2	523.305667	1044.59678	-1.5391	-0.00080541	-2.1942	-0.0011482	-3.7333	-0.0019536	523.3043931360254	91.382	2.3991	91.563	91.237	93.636	0.18029					145	56	4	0	0	0	0.77696	1	9185	9185		31.53	2.3598	1	1040100	+		20022	26054	13560	13570	23091	23091					0.0762661985700106
KELRKVLHGN	10	Unmodified	_KELRKVLHGN_					0	0	0			REV__ENST00000478958.5_1_2:238678415-238688172:+|nuORF	REV__ENST00000478958.5_1_2:238678415-238688172:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.3579711914062	2	597.359296	1192.70404	-0.24184	-0.00014447	-1.7236	-0.0010296	-1.9655	-0.0011741	597.3578636523395	100.56	3.0718	100.56	99.06	102.13	0					172	73	4	0	0	0	0.85834	1	10227	10227		22.58	1.6327	1	2923800	+		20023	18619	13561	13571	23092	23092					0.11539589791209437
KELRKVLHGN	10	Unmodified	_KELRKVLHGN_					0	0	0			REV__ENST00000478958.5_1_2:238678415-238688172:+|nuORF	REV__ENST00000478958.5_1_2:238678415-238688172:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.3583984375	2	597.359296	1192.70404	-0.45682	-0.00027289	-1.281	-0.00076525	-1.7379	-0.0010381	597.3582006630761	100.19	3.2446	100.23	98.977	102.22	0.046349					174	76	4	0	0	0	0.86698	1	10756	10756		28.081	3.5623	1	4145900	+		20024	18619	13561	13571	23093	23093					0.11539589791209437
KELRKVLHGN	10	Unmodified	_KELRKVLHGN_					0	0	0			REV__ENST00000478958.5_1_2:238678415-238688172:+|nuORF	REV__ENST00000478958.5_1_2:238678415-238688172:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.3588256835938	2	597.359296	1192.70404	0.89294	0.00053341	-2.814	-0.001681	-1.921	-0.0011475	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.86587	1	10472	10472		29.17	3.596	1	2674200	+		20025	18619	13561	13571	23094	23094					0.11539589791209437
KELSAIVL	8	Unmodified	_KELSAIVL_					0	0	0		ENST00000471326.5_1_1:154245614-154245674:+|nuORF	ENST00000471326.5_1_1:154245614-154245674:+|nuORF	ENST00000471326.5_1_1:154245614-154245674:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7748107910156	2	436.776211	871.537869	-0.16229	-7.0884E-05	-2.9337	-0.0012814	-3.096	-0.0013523	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.89494	1	9357	9357		37.159	5.2042	1	15341000			20026	12237	13562	13572	23095	23095					0.0969614356264401
KELSLPRRGR	10	Unmodified	_KELSLPRRGR_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3696899414062	2	606.370195	1210.72584	2.2948	0.0013915	-3.4602	-0.0020982	-1.1655	-0.00070671	606.3679986963975	94.415	3.2479	94.356	93.249	96.497	-0.059212					198	76	3	0	0	0	0.86272	1	10093	10093		24.519	0.31644	1	800340			20027	1754	13563	13573	23096	23096					0.12890394539772387
KELSRRRANM	10	Unmodified	_KELSRRRANM_					0	0	0			REV__ENSG00000119547|ENST00000491143|ONECUT2	REV__ENSG00000119547|ENST00000491143|ONECUT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.849853515625	2	630.851313	1259.68807	-0.1784	-0.00011254	-2.3169	-0.0014616	-2.4953	-0.0015742	630.8497127634344	110.75	1.3676	110.7	110.4	111.77	-0.057182					112	42	4	0	0	0	0.86218	1	12067	12067		32.812	0.061884	1	825620	+		20028	18358	13564	13574	23097	23097					0.06861560282663959
KELTKNPFI	9	Unmodified	_KELTKNPFI_					0	0	0			REV__ENSG00000148795|ENST00000369887|CYP17A1	REV__ENSG00000148795|ENST00000369887|CYP17A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3182983398438	2	545.318774	1088.623	0.15103	8.2357E-05	-4.1145	-0.0022437	-3.9634	-0.0021613	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.77696	1	8569	8569		31.53	1.2121	1	5755000	+		20029	20136	13565	13575	23098	23098					0.08222889028479585
KELTLYLD	8	Unmodified	_KELTLYLD_					0	0	0			REV__ENSG00000088538|ENST00000266037|DOCK3	REV__ENSG00000088538|ENST00000266037|DOCK3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.2660827636719	2	497.776408	993.538263	-0.50168	-0.00024973	1.6405	0.00081661	1.1388	0.00056689	497.776701888735	53.064	0.86584	53.478	53.086	53.951	0.4139					54	20	3	0	0	0	0.4196	1	5346	5346		32.812	3.6629	1	930100	+		20030	16943	13566	13576	23099	23099					0.041235184918377854
KELTQAMLVID	11	Unmodified	_KELTQAMLVID_					0	0	0			REV__nc|ENSG00000204256|P25440-4|BRD2	REV__nc|ENSG00000204256|P25440-4|BRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	630.8491821289062	2	630.847039	1259.67952	1.1522	0.00072686	3.1285	0.0019736	4.2807	0.0027005	630.848836753028	110.73	1.3896	110.76	110.4	111.79	0.031746					141	46	4	0	0	0	0.70584	1	12148	12148		30.569	0.25114	1	700180	+		20031	23473	13567	13577	23100	23100					0.060071488028142994
KELTQAMLVID	11	Unmodified	_KELTQAMLVID_					0	0	0			REV__nc|ENSG00000204256|P25440-4|BRD2	REV__nc|ENSG00000204256|P25440-4|BRD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.7584533691406	3	420.900451	1259.67952	0.39472	0.00016614	3.9636	0.0016683	4.3583	0.0018344	420.9021869618486	17.178	0.27701	16.567	16.429	16.706	-0.6107					7	5	2	0	0	0	0.17705	1	232	232		15.337	0	1	31426	+		20032	23473	13567	13577	23101	23101					0.060071488028142994
KELTSTVRK	9	Unmodified	_KELTSTVRK_					0	0	0		ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;ENST00000471834.1_1_6:152657861-152688565:-|nuORF	ENSG00000131018|ENST00000367255|SYNE1	ENSG00000131018|ENST00000367255|SYNE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.3190307617188	2	531.319306	1060.62406	-0.6637	-0.00035264	0.93655	0.00049761	0.27285	0.00014497	531.319555565115	95.322	2.6544	95.322	94.812	97.466	0					162	61	5	0	0	0	0.78528	1	9495	9495		29.17	0	1	1864100			20033	3707	13568	13578	23102	23102					0.0961710339736328
KELTSTVRK	9	Unmodified	_KELTSTVRK_					0	0	0		ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;ENST00000471834.1_1_6:152657861-152688565:-|nuORF	ENSG00000131018|ENST00000367255|SYNE1	ENSG00000131018|ENST00000367255|SYNE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.3186645507812	2	531.319306	1060.62406	1.2436	0.00066073	-1.246	-0.000662	-0.0023897	-1.2697E-06	531.3184005268905	94.973	2.3333	95.019	94.535	96.868	0.046173					183	54	5	0	0	0	0.7932	1	9995	9995		22.58	0.61977	1	4128600			20034	3707	13568	13578	23103	23103					0.0961710339736328
KELTSTVRK	9	Unmodified	_KELTSTVRK_					0	0	0		ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;ENST00000471834.1_1_6:152657861-152688565:-|nuORF	ENSG00000131018|ENST00000367255|SYNE1	ENSG00000131018|ENST00000367255|SYNE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.3185424804688	2	531.319306	1060.62406	0.78203	0.00041551	-0.64722	-0.00034388	0.13481	7.1626E-05	531.3186205937698	94.916	2.6028	95.079	94.616	97.219	0.16307					179	61	5	0	0	0	0.7932	1	9724	9724		24.519	0.99649	1	2661600			20035	3707	13568	13578	23104	23104					0.0961710339736328
KELVKKVPEE	10	Unmodified	_KELVKKVPEE_					0	0	0			REV__nc|ENSG00000197451|Q99729-3|HNRNPAB	REV__nc|ENSG00000197451|Q99729-3|HNRNPAB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2393493652344	3	400.239573	1197.69689	1.9742	0.00079015	-0.27958	-0.0001119	1.6946	0.00067825	400.23938020253263	19.381	0.46087	18.912	18.7	19.161	-0.46967					24	9	3	0	0	0	0.86207	1	512	512		24.232	2.5461	1	132040	+		20036	23232	13569	13579	23105	23105					0.10594812400154296
KELVVPKHV	9	Unmodified	_KELVVPKHV_					0	0	0		ENST00000587552.5_1_19:5696605-5708411:-|nuORF;ENST00000590558.5_1_19:5692045-5712033:-|nuORF;nc|ENSG00000196365|P36776-3|LONP1;nc|ENSG00000196365|P36776-2|LONP1;ENSG00000196365|ENST00000360614|LONP1	ENST00000587552.5_1_19:5696605-5708411:-|nuORF	ENST00000587552.5_1_19:5696605-5708411:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8271484375	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.55097	2	10136	10091;10136		49.442	10.189	1	15330000			20037	8044	13570	13580	23106;23107	23107					0.12214899127980061
KELVVPKHV	9	Unmodified	_KELVVPKHV_					0	0	0		ENST00000587552.5_1_19:5696605-5708411:-|nuORF;ENST00000590558.5_1_19:5692045-5712033:-|nuORF;nc|ENSG00000196365|P36776-3|LONP1;nc|ENSG00000196365|P36776-2|LONP1;ENSG00000196365|ENST00000360614|LONP1	ENST00000587552.5_1_19:5696605-5708411:-|nuORF	ENST00000587552.5_1_19:5696605-5708411:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8262939453125	2	524.829309	1047.64407	-0.038871	-2.04E-05	-3.7093	-0.0019467	-3.7481	-0.0019671	524.8272063900822	102.47	1.0685	102.49	101.99	103.06	0.01989					58	25	3	0	0	0	0.78536	1	10959	10959		29.15	1.2673	1	402610			20038	8044	13570	13580	23108	23108					0.12214899127980061
KELVVPKHV	9	Unmodified	_KELVVPKHV_					0	0	0		ENST00000587552.5_1_19:5696605-5708411:-|nuORF;ENST00000590558.5_1_19:5692045-5712033:-|nuORF;nc|ENSG00000196365|P36776-3|LONP1;nc|ENSG00000196365|P36776-2|LONP1;ENSG00000196365|ENST00000360614|LONP1	ENST00000587552.5_1_19:5696605-5708411:-|nuORF	ENST00000587552.5_1_19:5696605-5708411:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	524.829309	1047.64407	1.8774	0.00098533	-5.6661	-0.0029737	-3.7887	-0.0019884	524.826216538819	98.943	2.7054	99.306	98.811	101.52	0.36292	0.0084869	-0.00047143	NaN	49.442	220	67	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11934000			20039	8044	13570	13580							0.12214899127980061
KENAAAALVA	10	Unmodified	_KENAAAALVA_					0	0	0		ENSG00000173064|ENST00000682272|HECTD4;nc|ENSG00000173064|Q9Y4D8-5|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.97430419921875	2	479.271824	956.529095	-2.6364	-0.0012636	2.4726	0.001185	-0.16387	-7.854E-05	479.2725234954604	42.831	0.68877	43.529	43.299	43.987	0.69754					29	16	3	0	0	0	0.37624	1	3843	3843		64.207	21.811	1	1364300			20040	6820	13571	13581	23109	23109					0.04909169926179402
KENAASSMTE	10	Unmodified	_KENAASSMTE_					0	0	0		ENSG00000137745|ENST00000260302|MMP13	ENSG00000137745|ENST00000260302|MMP13	ENSG00000137745|ENST00000260302|MMP13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	534.2365112304688	2	534.237321	1066.46009	0.17307	9.2459E-05	-3.555	-0.0018992	-3.3819	-0.0018068	534.2353021816766	27.199	0.59001	27.308	27.064	27.654	0.10901					49	27	2	0	0	0	0.82886	1	1079	1079		37.812	2.1932	1	149470			20041	4231	13572	13582	23110	23110					-0.07048282155687957
KENIIRNPY	9	Unmodified	_KENIIRNPY_					0	0	0			REV__chr10:31461237-31466427|51|26.02|0.27|6.61|+|0|TE_info:L1M2,L1M2_dup6175,L1,LINE,acceptor,+,31466427,31466916|ZEB1,None|8	REV__chr10:31461237-31466427|51|26.02|0.27|6.61|+|0|TE_info:L1M2,L1M2_dup6175,L1,LINE,acceptor,+,31466427,31466916|ZEB1,None|8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.820556640625	2	573.81693	1145.61931	2.0517	0.0011773	2.1112	0.0012114	4.1629	0.0023888	573.8177633263879	100.19	0.70939	100.53	100.15	100.86	0.34591					42	17	3	0	0	0	0.71772	1	12154	12154		39.253	2.0937	1	590550	+		20042	15473	13573	13583	23111	23111					0.052322192545943835
KENKEKLLK	9	Unmodified	_KENKEKLLK_					0	0	0			REV__ENSG00000172361|ENST00000398545|CFAP53	REV__ENSG00000172361|ENST00000398545|CFAP53	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.3497924804688	2	565.350606	1128.68666	0.56097	0.00031715	-0.8018	-0.0004533	-0.24083	-0.00013615	565.3499776913663	48.469	0.56138	49.373	49.085	49.646	0.90424					31	13	3	0	0	0	0.71772	1	4715	4715		39.253	4.1008	1	1046300	+		20043	21824	13574	13584	23112	23112					0.1274624946554468
KENLVKLLNPR	11	Unmodified	_KENLVKLLNPR_					0	0	0		nc|ENSG00000141198|O75674-2|TOM1L1;nc|ENSG00000141198|O75674-3|TOM1L1;ENSG00000141198|ENST00000575882|TOM1L1	nc|ENSG00000141198|O75674-2|TOM1L1	nc|ENSG00000141198|O75674-2|TOM1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.9407043457031	3	441.94175	1322.80342	-0.30742	-0.00013586	-4.1523	-0.0018351	-4.4598	-0.001971	441.9398544843468	56.515	1.8945	56.486	55.84	57.735	-0.02866					126	70	3	0	0	0	0.68431	1	5210	5210		34.087	11.525	1	946810			20044	4481	13575	13585	23113	23113					0.15492987685320259
KENLVKLLNPR	11	Unmodified	_KENLVKLLNPR_					0	0	0		nc|ENSG00000141198|O75674-2|TOM1L1;nc|ENSG00000141198|O75674-3|TOM1L1;ENSG00000141198|ENST00000575882|TOM1L1	nc|ENSG00000141198|O75674-2|TOM1L1	nc|ENSG00000141198|O75674-2|TOM1L1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	441.94175	1322.80342	-0.12558	-5.5499E-05	-4.4661	-0.0019738	-4.5917	-0.0020293	441.93957826338976	56.555	0.34022	56.543	56.39	56.73	-0.012203	0.10883	-0.00029737	NaN	34.087	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	506170			20045	4481	13575	13585							0.15492987685320259
KENPLQFKF	9	Unmodified	_KENPLQFKF_					0	0	0		nc|ENSG00000137710|P35241-3|RDX;ENSG00000137710|ENST00000645495|RDX;ENSG00000092820|ENST00000367075|EZR;nc|ENSG00000137710|P35241-5|RDX	nc|ENSG00000137710|P35241-3|RDX	nc|ENSG00000137710|P35241-3|RDX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8170166015625	2	575.816399	1149.61824	-0.11128	-6.4075E-05	0.53606	0.00030867	0.42478	0.0002446	575.8165638258392	56.08	0.35255	56.053	55.808	56.161	-0.027279					21	10	3	0	0	0	0.33718	1	5139	5139		62.107	12.571	1	183640			20046	1703	13576	13586	23114	23114					0.04942004885697315
KENPLQFKF	9	Unmodified	_KENPLQFKF_					0	0	0		nc|ENSG00000137710|P35241-3|RDX;ENSG00000137710|ENST00000645495|RDX;ENSG00000092820|ENST00000367075|EZR;nc|ENSG00000137710|P35241-5|RDX	nc|ENSG00000137710|P35241-3|RDX	nc|ENSG00000137710|P35241-3|RDX	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	575.816399	1149.61824	-0.96756	-0.00055714	1.4243	0.00082012	0.45671	0.00026298	575.8173506400171	56.166	0.46091	56.156	55.836	56.297	-0.010136	0.051706	0.0005076	NaN	62.107	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	168030			20047	1703	13576	13586							0.04942004885697315
KENPRRLL	8	Unmodified	_KENPRRLL_					0	0	0			REV__ENSG00000163823|ENST00000296140|CCR1	REV__ENSG00000163823|ENST00000296140|CCR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3157958984375	2	513.314358	1024.61416	0.20062	0.00010298	4.4401	0.0022792	4.6408	0.0023822	513.3165818286456	46.69	1.0794	46.676	46.276	47.355	-0.013821					47	28	2	0	0	0	0.87064	1	3735	3735		29.15	1.2673	1	139720	+		20048	20981	13577	13587	23115	23115					0.10283960182664487
KENRPIRYLHV	11	Unmodified	_KENRPIRYLHV_					0	0	0		ENST00000468571.1_7:111617053-111644151:-|nuORF	ENST00000468571.1_7:111617053-111644151:-|nuORF	ENST00000468571.1_7:111617053-111644151:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	475.609619140625	3	475.608882	1423.80482	-1.5944	-0.0007583	0.87876	0.00041795	-0.71561	-0.00034035	475.60923762838786	51.773	0.59716	51.773	51.523	52.12	0					24	15	2	0	0	0	0.76251	1	4225	4225		19.263	0.73163	1	72219			20049	12181	13578	13588	23116	23116					0.10986621774054584
KEPAITFGLLP	11	Unmodified	_KEPAITFGLLP_					0	0	0			REV__ENSG00000154783|ENST00000285046|FGD5	REV__ENSG00000154783|ENST00000285046|FGD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.34375	2	593.347532	1184.68051	-1.311	-0.00077786	-3.8239	-0.0022689	-5.1349	-0.0030468	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.75164	1	10850	10850		21.686	3.3613	1	3957400	+		20050	20401	13579	13589	23117	23117					0.0955573123405884
KEPATPRK	8	Unmodified	_KEPATPRK_					0	0	0		chr4:103149408-103151219|63|90.11|0.95|6.57|-|2|CENPE,CENPE|2	chr4:103149408-103151219|63|90.11|0.95|6.57|-|2|CENPE,CENPE|2	chr4:103149408-103151219|63|90.11|0.95|6.57|-|2|CENPE,CENPE|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7742614746094	2	463.774534	925.534515	1.6265	0.00075433	-1.7075	-0.00079191	-0.081035	-3.7582E-05	463.77368742040437	24.507	1.7866	23.994	23.322	25.109	-0.51365					94	40	5	0	0	0	0.77771	1	1226	1226		64.207	0	1	3065500			20051	412	13580	13590	23118	23118					0.06876893508649573
KEPDVSEEL	9	Unmodified	_KEPDVSEEL_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.2575073242188	2	523.256037	1044.49752	-0.33652	-0.00017608	-2.4129	-0.0012626	-2.7494	-0.0014387	523.2545590970301	43.459	1.0459	43.909	43.436	44.482	0.45025					62	25	3	0	0	0	0.044173	1	3941	3941		110.12	8.5192	1	951740			20052	6838	13581	13591	23119	23119					-0.022948676184114447
KEPEINTTL	9	Unmodified	_KEPEINTTL_					0	0	0		ENST00000480341.5_1_13:22077016-22089705:-|nuORF;ENSG00000165487|ENST00000382374|MICU2	ENST00000480341.5_1_13:22077016-22089705:-|nuORF	ENST00000480341.5_1_13:22077016-22089705:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.2802734375	2	522.782222	1043.54989	-0.13924	-7.2791E-05	-3.795	-0.001984	-3.9342	-0.0020567	522.7825912963627	45.19	0.57463	45.653	45.224	45.799	0.46313					34	13	4	0	0	0	0.12688	2	4174	4174;4187		87.696	15.618	1	739780			20053	6085	13582	13592	23120;23121	23120					0.029857155152058112
KEPGPQPLPP	10	Unmodified	_KEPGPQPLPP_					0	0	0			REV__ENSG00000165684|ENST00000684778|SNAPC4	REV__ENSG00000165684|ENST00000684778|SNAPC4	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8208618164062	2	530.295299	1058.57605	-0.77004	-0.00040835	-2.8636	-0.0015186	-3.6336	-0.0019269	530.2936413485954	88.556	3.2175	88.556	86.473	89.691	0					178	74	3	0	0	0	0.37624	1	8371	8371		19.997	0.89325	1	522230	+		20054	21207	13583	13593	23122	23122					0.049100294773325004
KEPGPQPLPP	10	Unmodified	_KEPGPQPLPP_					0	0	0			REV__ENSG00000165684|ENST00000684778|SNAPC4	REV__ENSG00000165684|ENST00000684778|SNAPC4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	530.295299	1058.57605	-0.034549	-1.8321E-05	-3.6959	-0.0019599	-3.7305	-0.0019783	530.29324199138	88.454	3.0211	88.522	86.623	89.644	0.068161	0.0011245	0.00024035	NaN	26.693	203	70	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	801890	+		20055	21207	13583	13593							0.049100294773325004
KEPGPQPLPP	10	Unmodified	_KEPGPQPLPP_					0	0	0			REV__ENSG00000165684|ENST00000684778|SNAPC4	REV__ENSG00000165684|ENST00000684778|SNAPC4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	530.295299	1058.57605	1.7555	0.00093093	-5.4339	-0.0028816	-3.6784	-0.0019507	530.2923040115759	88.501	3.4218	88.427	86.098	89.52	-0.074005	-0.094404	-0.0016029	NaN	26.693	189	80	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	755450	+		20056	21207	13583	13593							0.049100294773325004
KEPGPQPLPP	10	Unmodified	_KEPGPQPLPP_					0	0	0			REV__ENSG00000165684|ENST00000684778|SNAPC4	REV__ENSG00000165684|ENST00000684778|SNAPC4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	530.295299	1058.57605	1.1402	0.00060466	-4.7987	-0.0025448	-3.6585	-0.0019401	530.2926370929762	88.266	3.2575	88.316	86.184	89.441	0.050415	-0.20491	-0.00092928	NaN	26.693	180	76	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	827240	+		20057	21207	13583	13593							0.049100294773325004
KEPGPQPLPP	10	Unmodified	_KEPGPQPLPP_					0	0	0			REV__ENSG00000165684|ENST00000684778|SNAPC4	REV__ENSG00000165684|ENST00000684778|SNAPC4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	530.295299	1058.57605	-0.072461	-3.8426E-05	-3.7458	-0.0019864	-3.8182	-0.0020248	530.2932163773347	88.263	3.2036	88.468	86.35	89.553	0.20427	-0.053449	0.0001875	NaN	26.693	195	75	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	874670	+		20058	21207	13583	13593							0.049100294773325004
KEPGPQPLPP	10	Unmodified	_KEPGPQPLPP_					0	0	0			REV__ENSG00000165684|ENST00000684778|SNAPC4	REV__ENSG00000165684|ENST00000684778|SNAPC4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	530.295299	1058.57605	0.71998	0.0003818	-4.4784	-0.0023749	-3.7584	-0.0019931	530.2928130097588	88.378	3.1634	88.529	86.361	89.525	0.15055	0.0073961	-0.00058949	NaN	26.693	197	74	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	862650	+		20059	21207	13583	13593							0.049100294773325004
KEPGPQPLPP	10	Unmodified	_KEPGPQPLPP_					0	0	0			REV__ENSG00000165684|ENST00000684778|SNAPC4	REV__ENSG00000165684|ENST00000684778|SNAPC4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	530.295299	1058.57605	-1.5125	-0.0008021	-2.2542	-0.0011954	-3.7668	-0.0019975	530.2939941950691	88.361	2.8995	88.531	86.571	89.47	0.17041	0.0099394	0.0017694	NaN	26.693	169	67	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	817800	+		20060	21207	13583	13593							0.049100294773325004
KEPGPQPLPP	10	Unmodified	_KEPGPQPLPP_					0	0	0			REV__ENSG00000165684|ENST00000684778|SNAPC4	REV__ENSG00000165684|ENST00000684778|SNAPC4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	530.295299	1058.57605	1.128	0.00059818	-4.8808	-0.0025883	-3.7528	-0.0019901	530.2925774282659	88.196	2.5482	88.645	87.227	89.775	0.44892	0.12409	-0.0010163	NaN	26.693	147	61	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	745420	+		20061	21207	13583	13593							0.049100294773325004
KEPGPQPLPP	10	Unmodified	_KEPGPQPLPP_					0	0	0			REV__ENSG00000165684|ENST00000684778|SNAPC4	REV__ENSG00000165684|ENST00000684778|SNAPC4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	530.295299	1058.57605	-1.116	-0.0005918	-2.6865	-0.0014246	-3.8025	-0.0020164	530.2937794932317	88.233	2.1546	88.696	88.018	90.173	0.46311	0.17512	0.001311	NaN	26.693	122	52	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	799330	+		20062	21207	13583	13593							0.049100294773325004
KEPHPLPLVPR	11	Unmodified	_KEPHPLPLVPR_					0	0	0		nc|ENSG00000163958|Q8WVZ1-2|ZDHHC19;nc|ENSG00000163958|Q8WVZ1-3|ZDHHC19;ENSG00000163958|ENST00000296326|ZDHHC19	nc|ENSG00000163958|Q8WVZ1-2|ZDHHC19	nc|ENSG00000163958|Q8WVZ1-2|ZDHHC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8822021484375	2	641.885147	1281.75574	-0.050098	-3.2157E-05	-4.1031	-0.0026337	-4.1532	-0.0026659	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.67778	1	10242	10242		35.152	8.4591	1	3644700			20063	5893	13584	13594	23123	23123					0.1261333348509197
KEPHPLPLVPR	11	Unmodified	_KEPHPLPLVPR_					0	0	0		nc|ENSG00000163958|Q8WVZ1-2|ZDHHC19;nc|ENSG00000163958|Q8WVZ1-3|ZDHHC19;ENSG00000163958|ENST00000296326|ZDHHC19	nc|ENSG00000163958|Q8WVZ1-2|ZDHHC19	nc|ENSG00000163958|Q8WVZ1-2|ZDHHC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8821411132812	2	641.885147	1281.75574	-1.1529	-0.00074004	-3.1	-0.0019899	-4.2529	-0.0027299	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.68532	1	9999	9999		33.922	4.7516	1	3521600			20064	5893	13584	13594	23124	23124					0.1261333348509197
KEPSSYRDV	9	Unmodified	_KEPSSYRDV_					0	0	0			REV__ENSG00000147432|ENST00000289957|CHRNB3	REV__ENSG00000147432|ENST00000289957|CHRNB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.7693481445312	2	540.769645	1079.52474	0.53711	0.00029045	-0.76714	-0.00041485	-0.23003	-0.00012439	540.7690431902984	24.273	0.63344	24.227	23.918	24.551	-0.04598					28	13	3	0	0	0	0.58668	1	943	943		47.657	6.8792	1	89385	+		20065	20070	13585	13595	23125	23125					-0.011843392873743142
KEPTASPI	8	Unmodified	_KEPTASPI_					0	0	0			REV__nc|ENSG00000147133|P21675-25|TAF1	REV__nc|ENSG00000147133|P21675-25|TAF1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.7390441894531	2	421.734543	841.454533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.881	1	30.878	30.378	31.378	-0.0022526								0	0	0	0.29755	1	1385	1385		24.203	2.2429	1		+		20066	20054	13586	13596	23126	23126					0.027464071148074254
KEPVVAVEPPL	11	Unmodified	_KEPVVAVEPPL_					0	0	0		nc|ENSG00000160401|Q5JU67-2|CFAP157;ENSG00000160401|ENST00000373295|CFAP157	nc|ENSG00000160401|Q5JU67-2|CFAP157	nc|ENSG00000160401|Q5JU67-2|CFAP157	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3436279296875	2	589.344989	1176.67542	-0.40075	-0.00023618	-3.0716	-0.0018102	-3.4723	-0.0020464	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.7144	1	8944	8944		29.17	3.1067	1	4112500			20067	5585	13587	13597	23127	23127					0.09415427371436635
KEQGKQMKK	9	Unmodified	_KEQGKQMKK_					0	0	0		ENST00000394628.2_1_10:79492938-79493973:+|nuORF	ENST00000394628.2_1_10:79492938-79493973:+|nuORF	ENST00000394628.2_1_10:79492938-79493973:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.8112182617188	2	552.813333	1103.61211	0.84573	0.00046753	-3.7334	-0.0020639	-2.8877	-0.0015964	552.8111137403027	28.325	0.86969	28.151	27.89	28.76	-0.17336					45	21	3	0	0	0	0.58668	1	1732	1732		47.657	9.8458	1	373020			20068	11072	13588	13598	23128	23128					0.06445163382522878
KEQHAKLQSTL	11	Unmodified	_KEQHAKLQSTL_					0	0	0			REV__ENST00000510104.5_1_5:140071123-140075505:+|nuORF	REV__ENST00000510104.5_1_5:140071123-140075505:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3619384765625	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.59499	1	12800	12800		45.022	4.244	1	27133000	+		20069	27946	13589	13599	23129	23129					0.07451545000549231
KEQLEAEAQAL	11	Unmodified	_KEQLEAEAQAL_					0	0	0		nc|ENSG00000163346|Q96AQ6-3|PBXIP1;nc|ENSG00000163346|Q96AQ6-2|PBXIP1;ENSG00000163346|ENST00000368463|PBXIP1	nc|ENSG00000163346|Q96AQ6-3|PBXIP1	nc|ENSG00000163346|Q96AQ6-3|PBXIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	615.3228759765625	2	615.322242	1228.62993	-0.45677	-0.00028106	0.34228	0.00021061	-0.11449	-7.0447E-05	615.3223812041749	47.46	0.54377	48.383	48.16	48.704	0.92315					34	13	3	0	0	0	0.58516	1	4546	4546		45.908	3.57	1	1535900			20070	5784	13590	13600	23130	23130					0.024761571183944397
KEQVGDIDEM	10	Oxidation (M)	_KEQVGDIDEM(Oxidation (M))_		KEQVGDIDEM(1)		KEQVGDIDEM(80)	0	0	1			REV__ENSG00000183346|ENST00000648843|CABCOCO1	REV__ENSG00000183346|ENST00000648843|CABCOCO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.2640380859375	2	590.263536	1178.51252	0.086308	5.0945E-05	0.68029	0.00040155	0.76659	0.00045249	590.2638249232199	82.298	1.0209	82.772	82.355	83.376	0.47383					73	24	4	0	0	0	0.23224	1	9576	9576		80.455	22.643	1	3517700	+		20071	22600	13591	13601	23131	23131		342			-0.06959743812740271
KERAEKIPTII	11	Unmodified	_KERAEKIPTII_					0	0	0			REV__chr10:5773941-5783324|14|91.93|0.56|7.35|-|1|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|9	REV__chr10:5773941-5783324|14|91.93|0.56|7.35|-|1|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5976867675781	3	433.266122	1296.77654	2.7183	0.0011778	-1.1793	-0.00051097	1.539	0.0006668	433.5993099119894	107.36	1.017	107.33	106.75	107.77	-0.034134					58	23	4	0	0	0	0.17437	1	11949	11949		20.315	12.281	1	1093500	+		20072	15476	13592	13602	23132	23132					0.14001879074135104
KERAQAVKRR	10	Unmodified	_KERAQAVKRR_					0	0	0			REV__ENSG00000184160|ENST00000330055|ADRA2C	REV__ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.59130859375	3	414.589822	1240.74764	1.2811	0.00053112	2.0107	0.0008336	3.2917	0.0013647	414.5906694648557	18.113	2.0122	17.636	17.425	19.437	-0.47694					106	43	5	0	0	0	0.81117	1	335	335		38.754	1.1537	1	3319700	+		20073	22648	13593	13603	23133	23133					0.13689199288342024
KERAQLLVNPK	11	Unmodified	_KERAQLLVNPK_					0	0	0		ENSG00000115942|ENST00000234296|ORC2	ENSG00000115942|ENST00000234296|ORC2	ENSG00000115942|ENST00000234296|ORC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5976257324219	3	432.597983	1294.77212	-1.5737	-0.00068079	1.9561	0.00084622	0.3824	0.00016543	432.59875141375613	106.97	1.3878	107.11	106.64	108.03	0.13866					68	34	2	0	0	0	0.73893	1	11558	11558		21.78	2.5177	1	21235000			20074	2884	13594	13604	23134	23134					0.13652414651210165
KEREHNFQPGD	11	Unmodified	_KEREHNFQPGD_					0	0	0		nc|ENSG00000196235|O00267-2|SUPT5H;ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF	nc|ENSG00000196235|O00267-2|SUPT5H	nc|ENSG00000196235|O00267-2|SUPT5H	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.8800354003906	3	452.881219	1355.62183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.493	1	20.864	20.364	21.364	-0.62835								0	0	0	0.56276	1	788	788		21.032	1.4053	1				20075	8031	13595	13605	23135	23135					-0.041759770783983186
KEREMAEMRAR	11	Unmodified	_KEREMAEMRAR_					0	0	0		nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-6|LMNA;nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA;ENST00000368298.2_1_1:156104977-156106341:+|nuORF;ENST00000496738.5_1_1:156104620-156106879:+|nuORF	nc|ENSG00000160789|P02545-5|LMNA	nc|ENSG00000160789|P02545-5|LMNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	469.57281494140625	3	469.571222	1405.69184	0.36994	0.00017371	4.2917	0.0020153	4.6617	0.002189	469.90768139738736	17.085	0.66042	16.602	16.417	17.077	-0.48256					27	14	3	0	0	0	0.72892	1	213	213		26.75	2.5179	1	63687			20076	5606	13596	13606	23136	23136					0.005218619942297664
KEREMAEMRAR	11	Unmodified	_KEREMAEMRAR_					0	0	0		nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-4|LMNA;nc|ENSG00000160789|P02545-6|LMNA;nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA;ENST00000368298.2_1_1:156104977-156106341:+|nuORF;ENST00000496738.5_1_1:156104620-156106879:+|nuORF	nc|ENSG00000160789|P02545-5|LMNA	nc|ENSG00000160789|P02545-5|LMNA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	469.571222	1405.69184	-0.25113	-0.00011792	4.7161	0.0022145	4.465	0.0020966	469.5731310466488	17.108	0.65562	16.498	16.348	17.003	-0.6107	-0.052215	0.00044105	NaN	26.75	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90262			20077	5606	13596	13606							0.005218619942297664
KEREPLRIKYF	11	Unmodified	_KEREPLRIKYF_					0	0	0			REV__ENSG00000083857|ENST00000441802|FAT1	REV__ENSG00000083857|ENST00000441802|FAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.6217346191406	3	493.620788	1477.84053	0.40491	0.00019987	0.20054	9.8993E-05	0.60545	0.00029886	493.62080407624626	30.653	0.85216	30.651	30.205	31.057	-0.0022526					107	42	3	0	0	0	0.76251	1	1354	1354		19.263	1.4295	1	258510	+		20078	16864	13597	13607	23137	23137					0.12072659231057514
KERERYRERER	11	Unmodified	_KERERYRERER_					0	0	0		ENSG00000113141|ENST00000417647|IK	ENSG00000113141|ENST00000417647|IK	ENSG00000113141|ENST00000417647|IK	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.21234130859375	4	402.468472	1605.84478	0.090467	3.641E-05	0.45552	0.00018333	0.54598	0.00021974	402.46878161089245	29.42	0.4287	29.532	29.308	29.737	0.11225					31	20	3	0	0	0	0.18331	1	1251	1251		5.6988	0.28586	1	61834			20079	2700	13598	13608	23138	23138					0.06609516706657814
KERERYRERER	11	Unmodified	_KERERYRERER_					0	0	0		ENSG00000113141|ENST00000417647|IK	ENSG00000113141|ENST00000417647|IK	ENSG00000113141|ENST00000417647|IK	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		4	402.468472	1605.84478	0.14777	5.9473E-05	-0.033888	-1.3639E-05	0.11388	4.5834E-05	402.4686589921061	29.637	0.18292	29.649	29.546	29.729	0.011229	0.058432	-0.00044411	NaN	5.6988	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29669			20080	2700	13598	13608							0.06609516706657814
KERILMQRK	9	Unmodified	_KERILMQRK_					0	0	0		ENSG00000157450|ENST00000348370|RNF111;nc|ENSG00000157450|Q6ZNA4|RNF111;nc|ENSG00000157450|Q6ZNA4-4|RNF111;nc|ENSG00000157450|Q6ZNA4-3|RNF111	ENSG00000157450|ENST00000348370|RNF111	ENSG00000157450|ENST00000348370|RNF111	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.24517822265625	3	401.244775	1200.7125	2.0284	0.00081388	-1.6173	-0.00064892	0.41112	0.00016496	401.24405132963193	20.855	0.89152	20.395	20.053	20.945	-0.4591					60	20	5	0	0	0	0.66686	1	695	695		42.864	1.4377	1	593280			20081	5431	13599	13609	23139	23139					0.1201682043620167
KERKHVEQIQ	10	Unmodified	_KERKHVEQIQ_					0	0	0			REV__ENST00000510345.2_1_4:111337808-111338090:+|nuORF	REV__ENST00000510345.2_1_4:111337808-111338090:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	647.865478515625	2	647.864943	1293.71533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.29	1	118.38	117.88	118.88	0.087753								0	0	0	0.45132	1	12485	12485		21.686	1.689	1		+		20082	27950	13600	13610	23140	23140					0.08022367094713445
KERKKIARKE	10	Unmodified	_KERKKIARKE_					0	0	0		nc|ENSG00000157388|Q01668-3|CACNA1D;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000157388|Q01668-2|CACNA1D;nc|ENSG00000157388|Q01668-4|CACNA1D	nc|ENSG00000157388|Q01668-3|CACNA1D	nc|ENSG00000157388|Q01668-3|CACNA1D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4055786132812	2	643.406778	1284.799	0.94326	0.0006069	-2.5215	-0.0016224	-1.5783	-0.0010155	643.4049918963857	105.64	1.1738	105.75	104.98	106.16	0.10766					144	29	6	0	0	0	0.86763	1	11226	11226		26.693	2.1737	1	23114000			20083	5426	13601	13611	23141	23141					0.16799523262420735
KERLKLFEILK	11	Unmodified	_KERLKLFEILK_					0	0	0		nc|ENSG00000185418|A2RTX5-2|TARS3;ENSG00000185418|ENST00000335968|TARS3	nc|ENSG00000185418|A2RTX5-2|TARS3	nc|ENSG00000185418|A2RTX5-2|TARS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.97076416015625	3	472.969417	1415.88642	0.051384	2.4303E-05	3.1198	0.0014756	3.1712	0.0014999	472.97087077601634	49.142	2.3722	49.137	48.43	50.803	-0.0056381					193	58	5	0	0	0	0.78351	1	4077	4077		14.779	4.6749	1	1340700			20084	7711	13602	13612	23142	23142					0.1951130441332225
KERLKLFEILK	11	Unmodified	_KERLKLFEILK_					0	0	0		nc|ENSG00000185418|A2RTX5-2|TARS3;ENSG00000185418|ENST00000335968|TARS3	nc|ENSG00000185418|A2RTX5-2|TARS3	nc|ENSG00000185418|A2RTX5-2|TARS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.970947265625	3	472.969417	1415.88642	-0.99152	-0.00046896	4.3588	0.0020616	3.3673	0.0015926	472.9714128496593	48.869	1.9906	48.895	48.114	50.105	0.025574					169	50	5	0	0	0	0.77511	1	3727	3727		16.53	3.0219	1	1653800			20085	7711	13602	13612	23143	23143					0.1951130441332225
KERLKLFEILK	11	Unmodified	_KERLKLFEILK_					0	0	0		nc|ENSG00000185418|A2RTX5-2|TARS3;ENSG00000185418|ENST00000335968|TARS3	nc|ENSG00000185418|A2RTX5-2|TARS3	nc|ENSG00000185418|A2RTX5-2|TARS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	473.3050842285156	3	472.969417	1415.88642	0.3106	0.00014691	3.0013	0.0014195	3.3119	0.0015664	473.3050663884793	49.019	2.0636	49.057	48.411	50.474	0.037731					160	51	5	0	0	0	0.78083	1	3772	3772		15.337	2.9046	1	2073100			20086	7711	13602	13612	23144	23144					0.1951130441332225
KERLKQKHKKR	11	Unmodified	_KERLKQKHKKR_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.6495056152344	3	493.651193	1477.93175	-1.6053	-0.00079248	-1.7269	-0.00085249	-3.3322	-0.001645	493.6501931782481	44.56	1.836	44.56	43.623	45.459	0					138	44	4	0	0	0	0.81892	1	3225	3225		8.0344	4.6256	1	434870			20087	8999	13603	13613	23145	23145					0.21189967719055858
KERLQLLNAQL	11	Unmodified	_KERLQLLNAQL_					0	0	0		nc|ENSG00000078403|P55197-1|MLLT10;ENSG00000078403|ENST00000307729|MLLT10	nc|ENSG00000078403|P55197-1|MLLT10	nc|ENSG00000078403|P55197-1|MLLT10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.60113525390625	3	442.601504	1324.78268	-0.96202	-0.00042579	0.15349	6.7935E-05	-0.80853	-0.00035786	442.60138371478644	103.97	1.3087	103.97	103.68	104.99	0					72	32	4	0	0	0	0.73277	1	10734	10734		25.892	2.5138	1	296460			20088	1399	13604	13614	23146	23146					0.1332839730566775
KERQKKSA	8	Unmodified	_KERQKKSA_					0	0	0			REV__ENSG00000114374|ENST00000338981|USP9Y;REV__nc|ENSG00000124486|Q93008-3|USP9X	REV__ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.791015625	2	487.790715	973.566878	-0.24073	-0.00011743	0.15721	7.6687E-05	-0.083519	-4.074E-05	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.89043	1	9996	9996		35.618	1.4457	1	1981400	+		20089	18042;18587	13605	13615	23147	23147					0.07903680911658739
KERQVLKK	8	Unmodified	_KERQVLKK_					0	0	0			REV__ENSG00000157851|ENST00000288699|DPYSL5	REV__ENSG00000157851|ENST00000288699|DPYSL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.83251953125	2	514.832383	1027.65021	0.22146	0.00011401	-0.034722	-1.7876E-05	0.18674	9.6138E-05	514.8320535680291	20.785	0.53633	20.155	19.9	20.436	-0.6296					22	12	3	0	0	0	0.91472	1	704	704		44.117	3.3386	1	117210	+		20090	20569	13606	13616	23148	23148					0.13749417359508698
KERRNLLRL	9	Unmodified	_KERRNLLRL_					0	0	0		ENST00000532045.5_1_11:834538-836571:+|nuORF;ENSG00000177697|ENST00000397420|CD151	ENST00000532045.5_1_11:834538-836571:+|nuORF	ENST00000532045.5_1_11:834538-836571:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3800048828125	2	599.380563	1196.74657	0.89992	0.0005394	-1.6462	-0.00098668	-0.74624	-0.00044728	599.379410135585	103.38	3.1227	103.51	103.01	106.14	0.12621					246	78	5	0	0	0	0.7932	1	10980	10980		25.45	1.2474	1	20012000			20091	7158	13607	13617	23149	23149					0.15606984919463684
KERYEIEP	8	Unmodified	_KERYEIEP_					0	0	0			REV__ENSG00000204178|ENST00000374343|MACO1	REV__ENSG00000204178|ENST00000374343|MACO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.304931640625	2	532.274564	1062.53457	0.68055	0.00036224	-0.88277	-0.00046987	-0.20222	-0.00010763	532.2742046708826	32.598	0.42759	32.81	32.507	32.935	0.21168					13	9	2	0	0	0	0.4196	1	2309	2309		30.504	11.4	1	62211	+		20092	23467	13608	13618	23150	23150					0.0058084871798200766
KESAAKKL	8	Unmodified	_KESAAKKL_					0	0	0			REV__nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP	REV__nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77142333984375	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.81724	1	2947	2947		14.664	0	1	9763800	+		20093	17668	13609	13619	23151	23151					0.08654375277126292
KESAITLGG	9	Unmodified	_KESAITLGG_					0	0	0			REV__ENST00000566567.1_1_9:139000642-139000753:-|nuORF	REV__ENST00000566567.1_1_9:139000642-139000753:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2627258300781	2	438.245275	874.475997	-0.11319	-4.9606E-05	-1.4396	-0.0006309	-1.5528	-0.00068051	438.2441170878229	40.201	0.1634	40.153	40.082	40.245	-0.04789					7	4	2	0	0	0	0.20789	1	2538	2538		32.812	3.6629	1	45910	+		20094	28871	13610	13620	23152	23152					0.03373792143531773
KESEDKPEI	9	Unmodified	_KESEDKPEI_					0	0	0		ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.7689819335938	2	537.769311	1073.52407	0.2234	0.00012014	0.26948	0.00014492	0.49287	0.00026505	537.7692334658091	24.754	0.76684	24.426	24.116	24.883	-0.32825					45	16	4	0	0	0	0.19437	1	1218	1218		75.043	2.1641	1	482240			20095	1452	13611	13621	23153	23153					-0.009751787270943169
KESEVLIG	8	Unmodified	_KESEVLIG_					0	0	0		ENSG00000131558|ENST00000253861|EXOC4	ENSG00000131558|ENST00000253861|EXOC4	ENSG00000131558|ENST00000253861|EXOC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26263427734375	2	437.74765	873.480748	-1.8907	-0.00082764	1.268	0.00055505	-0.62272	-0.00027259	437.74808755964233	42.345	1.2085	42.775	42.291	43.499	0.43041					50	29	3	0	0	0	0.4196	1	3709	3709		29.15	0	1	698840			20096	3737	13612	13622	23154	23154					0.038946762862906326
KESKGVARN	9	Unmodified	_KESKGVARN_					0	0	0		L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|19|1|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|19|1|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|19|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7799377441406	2	494.780348	987.546142	-0.85772	-0.00042438	0.93735	0.00046378	0.07963	3.9399E-05	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.78058	1	8925	8925		30.504	0	1	737700			20097	14590	13613	13623	23155	23155					0.05187090532001548
KESKLLSA	8	Unmodified	_KESKLLSA_					0	0	0		ENSG00000108511|ENST00000225648|HOXB6	ENSG00000108511|ENST00000225648|HOXB6	ENSG00000108511|ENST00000225648|HOXB6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26318359375	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.82658	1	2291	2291		21.96	0.25755	1	3507500			20098	2412	13614	13624	23156	23156					0.07010669040244011
KESKLLSA	8	Unmodified	_KESKLLSA_					0	0	0		ENSG00000108511|ENST00000225648|HOXB6	ENSG00000108511|ENST00000225648|HOXB6	ENSG00000108511|ENST00000225648|HOXB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2637939453125	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.8347	1	2795	2795		23.042	0	1	2862500			20099	2412	13614	13624	23157	23157					0.07010669040244011
KESLILHR	8	Unmodified	_KESLILHR_					0	0	0			REV__ENSG00000147364|ENST00000350302|FBXO25	REV__ENSG00000147364|ENST00000350302|FBXO25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.3025207519531	2	498.303458	994.592364	0.46261	0.00023052	-0.96491	-0.00048082	-0.50229	-0.00025029	498.3028155429852	31.945	0.72806	32.052	31.675	32.403	0.10707					35	16	3	0	0	0	0.90523	1	2206	2206		40.778	0.20554	1	354970	+		20100	20066	13615	13625	23158	23158					0.0948515543409485
KESLKTKLLT	10	Unmodified	_KESLKTKLLT_					0	0	0			REV__nc|ENSG00000103310|Q05996-2|ZP2	REV__nc|ENSG00000103310|Q05996-2|ZP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8660888671875	2	580.866089	1159.71762	-0.64777	-0.00037627	0.13151	7.639E-05	-0.51626	-0.00029988	580.8660675480357	62.454	0.90882	63.009	62.214	63.123	0.55449					53	20	3	0	0	0	0.85981	1	6706	6706		35.152	4.6484	1	770700	+		20101	17402	13616	13626	23159	23159					0.14415402779786746
KESLSPKR	8	Unmodified	_KESLSPKR_					0	0	0			REV__ENSG00000118308|ENST00000556887|IRAG2	REV__ENSG00000118308|ENST00000556887|IRAG2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.7792053222656	2	472.779816	943.545079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.247	1	22.672	22.172	23.172	-0.57415								0	0	0	0.29403	1	1021	1021		32.812	0	1		+		20102	18303	13617	13627	23160	23160					0.07104876163089102
KESRRPRVAS	10	Unmodified	_KESRRPRVAS_					0	0	0			REV__nc|ENSG00000185787|Q9UBU8|MORF4L1	REV__nc|ENSG00000185787|Q9UBU8|MORF4L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.34326171875	2	593.344178	1184.6738	-0.64573	-0.00038314	1.086	0.00064436	0.44025	0.00026122	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.85834	1	11284	11284		22.58	0.89391	1	2296600	+		20103	30101	13618	13628	23161	23161					0.08885231126032522
KESSIKAI	8	Unmodified	_KESSIKAI_					0	0	0			REV__ENSG00000188522|ENST00000388995|FAM83G	REV__ENSG00000188522|ENST00000388995|FAM83G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2630920410156	2	438.263468	874.512382	-1.2747	-0.00055866	-0.66852	-0.00029299	-1.9432	-0.00085165	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.89494	1	3698	3698		37.159	0	1	219150000	+		20104	23007	13619	13629	23162	23162					0.07010669040232642
KESSTVFEL	9	Unmodified	_KESSTVFEL_					0	0	0		ENSG00000103363|ENST00000409906|ELOB;nc|ENSG00000103363|Q15370-2|ELOB	ENSG00000103363|ENST00000409906|ELOB	ENSG00000103363|ENST00000409906|ELOB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.2694702148438	2	520.268947	1038.52334	-0.2811	-0.00014625	-0.016853	-8.7683E-06	-0.29795	-0.00015501	520.2688275849175	53.739	0.79505	54.324	53.872	54.667	0.58474					42	18	3	0	0	0	0.33718	1	5461	5461		62.107	1.1355	1	1065400			20105	2078	13620	13630	23163	23163					0.005620266238793192
KESTEIPTTIL	11	Unmodified	_KESTEIPTTIL_					0	0	0		ENSG00000174373|ENST00000680220|RALGAPA1	ENSG00000174373|ENST00000680220|RALGAPA1	ENSG00000174373|ENST00000680220|RALGAPA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.3574829101562	2	616.342643	1230.67073	1.2229	0.00075375	2.8652	0.001766	4.0882	0.0025197	616.3440606744759	104.26	0.67226	104.43	104.05	104.73	0.17095					19	16	2	0	0	0	0.17318	1	11068	11068		32.812	4.7309	1	85081			20106	6929	13621	13631	23164	23164					0.06462498438008879
KESTLHLVL	9	Unmodified	_KESTLHLVL_					0	0	0		ENSG00000221983|ENST00000442744|UBA52;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENSG00000143947|ENST00000272317|RPS27A;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENSG00000170315|ENST00000302182|UBB;ENSG00000150991|ENST00000339647|UBC;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENSG00000221983|ENST00000442744|UBA52	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.3101806640625	2	520.310949	1038.60735	-0.47215	-0.00024567	-0.66396	-0.00034546	-1.1361	-0.00059113	520.3106236669839	47.673	2.5969	48.142	47.691	50.288	0.46941					161	64	5	0	0	0	8.9147E-29	8	4577	4520;4529;4541;4553;4565;4577;4590;4604		186.09	95.312	1	63528000			20107	8691;12378	13622	13632	23165;23166;23167;23168;23169;23170;23171;23172	23170					0.08958602511415847
KESTLHLVL	9	Unmodified	_KESTLHLVL_					0	0	0		ENSG00000221983|ENST00000442744|UBA52;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENSG00000143947|ENST00000272317|RPS27A;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENSG00000170315|ENST00000302182|UBB;ENSG00000150991|ENST00000339647|UBC;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENSG00000221983|ENST00000442744|UBA52	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.3101196289062	2	520.310949	1038.60735	-0.80073	-0.00041663	-0.4323	-0.00022493	-1.233	-0.00064156	520.3107459574055	47.488	2.5541	48.411	48.041	50.595	0.92315					144	63	5	0	0	0	6.1523E-05	7	4555	4510;4519;4531;4543;4555;4567;4579		148.04	68.592	1	62774000			20108	8691;12378	13622	13632	23173;23174;23175;23176;23177;23178;23179	23177					0.08958602511415847
KESVIMKHLDD	11	Unmodified	_KESVIMKHLDD_					0	0	0			REV__nc|ENSG00000120729|Q9UBF9-2|MYOT	REV__nc|ENSG00000120729|Q9UBF9-2|MYOT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.262939453125	3	438.895589	1313.66494	-1.0684	-0.00046891	-2.9578	-0.0012982	-4.0262	-0.0017671	439.2286911251328	44.086	0.35331	44.053	43.916	44.269	-0.033474					11	8	2	0	0	0	0.17432	1	3500	3500		26.75	6.7192	1	37258	+		20109	18426	13623	13633	23180	23180					0.020650766547078092
KESVQKNEFI	10	Unmodified	_KESVQKNEFI_					0	0	0		ENST00000591330.5_1_17:40855746-40879722:-|nuORF;nc|ENSG00000108799|Q92800-5|EZH1;ENST00000585912.5_1_17:40855746-40880959:-|nuORF;nc|ENSG00000108799|Q92800-4|EZH1;ENST00000586103.5_1_17:40855746-40880959:-|nuORF;nc|ENSG00000108799|Q92800-3|EZH1;ENSG00000108799|ENST00000428826|EZH1;nc|ENSG00000108799|Q92800-2|EZH1;ENST00000585550.5_1_17:40855746-40872302:-|nuORF	ENST00000591330.5_1_17:40855746-40879722:-|nuORF	ENST00000591330.5_1_17:40855746-40879722:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3300170898438	2	611.327328	1220.6401	1.1116	0.00067957	2.0124	0.0012302	3.1241	0.0019098	611.3286276945797	78.517	1.0448	78.644	78.256	79.301	0.12695					71	31	4	0	0	0	0.86218	1	7399	7399		32.812	0.061884	1	448710			20110	2432	13624	13634	23181	23181					0.03860764843625475
KESWVGAV	8	Unmodified	_KESWVGAV_					0	0	0			REV__ENSG00000105447|ENST00000253237|GRWD1	REV__ENSG00000105447|ENST00000253237|GRWD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2637634277344	2	438.23471	874.454868	0.25165	0.00011028	0.28844	0.0001264	0.54008	0.00023668	438.23433792229184	35.928	0.35162	36.176	36.043	36.395	0.24769					12	8	2	0	0	0	0.4196	1	2785	2785		51.335	14.176	1	219990	+		20111	17541	13625	13635	23182	23182					0.012618268346727746
KETATMADP	9	Unmodified	_KETATMADP_					0	0	0			REV__nc|ENSG00000204410|O43196-4|MSH5	REV__nc|ENSG00000204410|O43196-4|MSH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	482.2240905761719	2	482.226225	962.437897	-0.22439	-0.00010821	0.81539	0.0003932	0.591	0.00028499	482.2265058811966	31.701	0.91326	31.65	31.053	31.966	-0.051033					25	20	2	0	0	0	0.58151	1	1830	1830		47.916	1.9636	1	20430	+		20112	23490	13626	13636	23183	23183					-0.0448246183344736
KETEKDFK	8	Unmodified	_KETEKDFK_					0	0	0			REV__ENSG00000071205|ENST00000336498|ARHGAP10	REV__ENSG00000071205|ENST00000336498|ARHGAP10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7695922851562	2	512.769114	1023.52368	0.92826	0.00047598	-0.98997	-0.00050762	-0.061706	-3.1641E-05	512.7684512724358	22.716	0.75475	22.297	21.97	22.725	-0.41879					42	17	4	0	0	0	0.90523	1	922	922		40.778	2.9666	1	536540	+		20113	16623	13627	13637	23184	23184					0.012854463437065533
KETGRKDQK	9	Unmodified	_KETGRKDQK_					0	0	0		nc|ENSG00000127311|Q8NG08-2|HELB;ENSG00000127311|ENST00000247815|HELB	nc|ENSG00000127311|Q8NG08-2|HELB	nc|ENSG00000127311|Q8NG08-2|HELB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3074951171875	2	545.304187	1088.59382	1.622	0.00088447	1.7254	0.00094085	3.3473	0.0018253	545.3051122101872	24.517	1.7889	24.003	23.196	24.985	-0.51365					105	40	6	0	0	0	0.28163	1	1156	1156		66.429	2.222	1	6709400			20114	3488	13628	13638	23185	23185					0.05306744732183688
KETISRPAAS	10	Unmodified	_KETISRPAAS_					0	0	0		ENST00000423799.6_1_8:57123691-57123850:-|nuORF	ENST00000423799.6_1_8:57123691-57123850:-|nuORF	ENST00000423799.6_1_8:57123691-57123850:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2931518554688	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.86218	1	8871	8871		32.812	0	1	1390700			20115	11505	13629	13639	23186	23186					0.04507939983614051
KETISRPAAS	10	Unmodified	_KETISRPAAS_					0	0	0		ENST00000423799.6_1_8:57123691-57123850:-|nuORF	ENST00000423799.6_1_8:57123691-57123850:-|nuORF	ENST00000423799.6_1_8:57123691-57123850:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2935791015625	2	530.293288	1058.57202	0.74166	0.0003933	-0.55232	-0.00029289	0.18935	0.00010041	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.85981	1	9112	9112		35.152	3.5178	1	2081200			20116	11505	13629	13639	23187	23187					0.04507939983614051
KETKRCVDT	9	Unmodified	_KETKRCVDT_					0	0	0			REV__ENST00000342992.10_3_2:179641971-179642211:-|nuORF	REV__ENST00000342992.10_3_2:179641971-179642211:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.2766723632812	2	540.279323	1078.54409	0.2419	0.00013069	-3.3176	-0.0017925	-3.0757	-0.0016618	540.277467226308	20.169	0.59767	19.71	19.502	20.1	-0.4591					25	12	3	0	0	0	0.70638	1	621	621		40.058	3.6114	1	218590	+		20117	25287	13630	13640	23188	23188					0.00796293731877995
KETLGVLIFK	10	Unmodified	_KETLGVLIFK_					0	0	0			REV__ENSG00000255298|ENST00000641992|OR8G5	REV__ENSG00000255298|ENST00000641992|OR8G5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3560791015625	2	574.357899	1146.70125	-1.0357	-0.00059487	-2.3996	-0.0013783	-3.4354	-0.0019731	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.86272	1	10696	10696		24.519	0.31644	1	715310	+		20118	23896	13631	13641	23189	23189					0.13376321613714026
KETPKDKSH	9	Unmodified	_KETPKDKSH_					0	0	0			REV__ENSG00000152527|ENST00000282406|PLEKHH2	REV__ENSG00000152527|ENST00000282406|PLEKHH2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.3540649414062	2	535.285463	1068.55637	-0.19712	-0.00010552	-3.9091	-0.0020925	-4.1062	-0.002198	535.2826527532076	64.461	0.78873	64.848	64.567	65.356	0.3868					31	18	2	0	0	0	0.20789	1	6940	6940		40.778	16.259	1	93308	+		20119	20304	13632	13642	23190	23190					0.024836534665837462
KETPKDKSH	9	Unmodified	_KETPKDKSH_					0	0	0			REV__ENSG00000152527|ENST00000282406|PLEKHH2	REV__ENSG00000152527|ENST00000282406|PLEKHH2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	535.285463	1068.55637	-0.16647	-8.9107E-05	-6.5871	-0.003526	-6.7535	-0.0036151	535.7829617671417	64.504	0.8457	65.058	64.641	65.487	0.55386	0.10481	-0.001625	NaN	40.778	32	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171940	+		20120	20304	13632	13642							0.024836534665837462
KETRAEPKK	9	Unmodified	_KETRAEPKK_					0	0	0		ENST00000513504.1_1_4:152592328-152612815:-|nuORF;ENSG00000059691|ENST00000263985|GATB	ENST00000513504.1_1_4:152592328-152612815:-|nuORF	ENST00000513504.1_1_4:152592328-152612815:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.816162109375	2	543.81693	1085.61931	0.50545	0.00027487	-0.41991	-0.00022835	0.085544	4.652E-05	543.8166843350693	25.196	0.49926	25.155	24.893	25.392	-0.04117					17	12	2	0	0	0	0.73802	1	1049	1049		37.812	2.1932	1	38703			20121	1055	13633	13643	23191	23191					0.07992219254606425
KEVDNIIDE	9	Unmodified	_KEVDNIIDE_					0	0	0			REV__nc|ENSG00000132437|P20711-2|DDC	REV__nc|ENSG00000132437|P20711-2|DDC	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.7683715820312	2	537.769311	1073.52407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.607	1	24.094	23.594	24.594	-0.51365								0	0	0	0.36993	1	1208	1208		60.118	7.1816	1		+		20122	19004	13634	13644	23192	23192					-0.009751787270943169
KEVDPSTGEL	10	Unmodified	_KEVDPSTGEL_					0	0	0		nc|ENSG00000161011|Q13501-2|SQSTM1;ENSG00000161011|ENST00000389805|SQSTM1	nc|ENSG00000161011|Q13501-2|SQSTM1	nc|ENSG00000161011|Q13501-2|SQSTM1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.769287109375	2	537.769311	1073.52407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.789	1	24.275	23.775	24.775	-0.51365								0	0	0	0.0061567	1	1232	1232		85.161	0	1				20123	5624	13635	13645	23193	23193					-0.009751787270943169
KEVGVPTVKLK	11	Unmodified	_KEVGVPTVKLK_					0	0	0		ENST00000398689.2_1_10:76415232-76415652:+|nuORF	ENST00000398689.2_1_10:76415232-76415652:+|nuORF	ENST00000398689.2_1_10:76415232-76415652:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3794555664062	2	599.381906	1196.74926	0.89992	0.0005394	-3.8863	-0.0023293	-2.9863	-0.00179	599.379410135585	103.38	3.1227	103.51	103.01	106.14	0.12621					246	78	5	0	0	0	0.66929	1	11016	11016		36.447	2.2742	1	20012000			20124	11190	13636	13646	23194	23194					0.15875395533748815
KEVKGKTH	8	Unmodified	_KEVKGKTH_					0	0	0		ENSG00000004142|ENST00000540200|POLDIP2	ENSG00000004142|ENST00000540200|POLDIP2	ENSG00000004142|ENST00000540200|POLDIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7744445800781	2	463.774534	925.534515	0.057333	2.659E-05	-0.049364	-2.2894E-05	0.007969	3.6958E-06	463.77442651383814	24.601	1.5167	24.272	23.544	25.061	-0.32825					84	33	4	0	0	0	0.3646	5	1181	1170;1181;1193;1205;1217		85.359	21.64	1	2790000			20125	659	13637	13647	23195;23196;23197;23198;23199	23196					0.0687689350867231
KEVKGKTH	8	Unmodified	_KEVKGKTH_					0	0	0		ENSG00000004142|ENST00000540200|POLDIP2	ENSG00000004142|ENST00000540200|POLDIP2	ENSG00000004142|ENST00000540200|POLDIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.77447509765625	2	463.774534	925.534515	1.6265	0.00075433	-1.7075	-0.00079191	-0.081035	-3.7582E-05	463.77368742040437	24.507	1.7866	23.994	23.322	25.109	-0.51365					94	40	5	0	0	0	0.3646	4	1183	1172;1183;1195;1214		90.777	18.93	1	3065500			20126	659	13637	13647	23200;23201;23202;23203	23201					0.0687689350867231
KEVLLSPRN	9	Unmodified	_KEVLLSPRN_					0	0	0			REV__ENSG00000128602|ENST00000249373|SMO	REV__ENSG00000128602|ENST00000249373|SMO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.3130493164062	2	528.314023	1054.61349	1.2423	0.00065632	-1.2033	-0.0006357	0.039025	2.0617E-05	528.3135537689813	98.237	1.3537	98.285	97.706	99.06	0.048164					68	30	3	0	0	0	0.55097	1	10532	10532		49.442	1.482	1	423330	+		20127	18783	13638	13648	23204	23204					0.08837120742964544
KEVLVGEPKVL	11	Unmodified	_KEVLVGEPKVL_					0	0	0			REV__ENSG00000166535|ENST00000299698|A2ML1	REV__ENSG00000166535|ENST00000299698|A2ML1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.8713989257812	2	605.873914	1209.73327	-0.46872	-0.00028398	-2.5451	-0.001542	-3.0138	-0.001826	605.8722201329331	100.48	2.0532	100.52	100	102.06	0.039742					113	47	4	0	0	0	0.7144	1	10764	10764		29.17	3.596	1	1745000	+		20128	21302	13639	13649	23205	23205					0.13679689296850484
KEVPKVLRSTP	11	Unmodified	_KEVPKVLRSTP_					0	0	0			REV__ENSG00000205413|ENST00000379958|SAMD9	REV__ENSG00000205413|ENST00000379958|SAMD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3873291015625	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.77421	1	13112	13112		16.717	1.3843	1	19815000	+		20129	23558	13640	13650	23206	23206					0.1340560990265658
KEVPKVLRSTP	11	Unmodified	_KEVPKVLRSTP_					0	0	0			REV__ENSG00000205413|ENST00000379958|SAMD9	REV__ENSG00000205413|ENST00000379958|SAMD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3839721679688	2	627.382437	1252.75032	0.9271	0.00058164	-0.91787	-0.00057585	0.0092291	5.7902E-06	627.3816040296016	111.26	0.49553	111.33	110.97	111.47	0.069542					53	19	3	0	0	0	0.74022	1	11968	11968		24.232	1.1893	1	2019600	+		20130	23558	13640	13650	23207	23207					0.1340560990265658
KEVPVVHT	8	Unmodified	_KEVPVVHT_					0	0	0		nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;ENSG00000082397|ENST00000341928|EPB41L3	nc|ENSG00000082397|Q9Y2J2-2|EPB41L3	nc|ENSG00000082397|Q9Y2J2-2|EPB41L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.76318359375	2	454.763635	907.512717	-1.6468	-0.00074888	0.88455	0.00040226	-0.76221	-0.00034662	454.7640048592381	47.693	0.81293	48.163	47.855	48.668	0.46941					53	20	4	0	0	0	0.88944	2	4554	4554;4567		57.811	3.0466	1	5728200			20131	1484	13641	13651	23208;23209	23208					0.055260887600866226
KEVPVVHT	8	Unmodified	_KEVPVVHT_					0	0	0		nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;ENSG00000082397|ENST00000341928|EPB41L3	nc|ENSG00000082397|Q9Y2J2-2|EPB41L3	nc|ENSG00000082397|Q9Y2J2-2|EPB41L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.7636413574219	2	454.763635	907.512717	-0.87729	-0.00039896	0.10816	4.9188E-05	-0.76913	-0.00034977	454.76364990871195	47.486	0.78397	48.409	48.12	48.904	0.92315					52	19	4	0	0	0	0.9295	1	4527	4527		55.504	7.5886	1	6225300			20132	1484	13641	13651	23210	23210					0.055260887600866226
KEWFDVFEKEL	11	Unmodified	_KEWFDVFEKEL_					0	0	0			REV__ENSG00000196074|ENST00000357552|SYCP2	REV__ENSG00000196074|ENST00000357552|SYCP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.5796813964844	3	490.581887	1468.72383	-0.28021	-0.00013746	-4.4298	-0.0021732	-4.7101	-0.0023107	490.5797090913325	18.039	0.75284	17.962	17.746	18.499	-0.07671					70	23	5	0	0	0	0.74002	1	266	266		24.276	2.4955	1	602520	+		20133	23085	13642	13652	23211	23211					0.00821876220629747
KEWLEKAKFT	10	Unmodified	_KEWLEKAKFT_					0	0	0			REV__nc|ENSG00000122378|Q9BRX8-2|PRXL2A	REV__nc|ENSG00000122378|Q9BRX8-2|PRXL2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3602294921875	2	640.355888	1278.69722	1.5776	0.0010102	3.0157	0.0019311	4.5934	0.0029414	640.3576428069522	98.956	2.793	99.317	98.237	101.03	0.36136					173	69	3	0	0	0	0.82886	1	11888	11888		37.812	1.3648	1	1011800	+		20134	18492	13643	13653	23212	23212					0.06902232119955443
KEWLWYVLNSE	11	Unmodified	_KEWLWYVLNSE_					0	0	0			REV__nc|ENSG00000243710|Q96MR6-2|CFAP57	REV__nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.5819091796875	3	489.581998	1465.72417	-0.084115	-4.1181E-05	0.021156	1.0358E-05	-0.062959	-3.0823E-05	489.5819587953439	67.75	0.63969	67.772	67.494	68.133	0.021599					64	28	3	0	0	0	0.74771	1	6383	6383		22.562	4.7284	1	220010	+		20135	23842	13644	13654	23213	23213					0.00993295940520511
KEYIPPLIW	9	Unmodified	_KEYIPPLIW_					0	0	0		ENSG00000140526|ENST00000352732|ABHD2	ENSG00000140526|ENST00000352732|ABHD2	ENSG00000140526|ENST00000352732|ABHD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.83203125	2	579.831517	1157.64848	-0.90346	-0.00052385	0.89228	0.00051737	-0.011177	-6.4809E-06	579.831939814516	82.119	1.0062	82.185	81.822	82.828	0.065918					58	22	3	0	0	0	0.64555	3	8114	8085;8097;8114		44.377	10.456	1	406160			20136	4442	13645	13655	23214;23215;23216	23216					0.07596363550896967
KEYIPPLIW	9	Unmodified	_KEYIPPLIW_					0	0	0		ENSG00000140526|ENST00000352732|ABHD2	ENSG00000140526|ENST00000352732|ABHD2	ENSG00000140526|ENST00000352732|ABHD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.830810546875	2	579.831517	1157.64848	0.82643	0.00047919	-0.82624	-0.00047908	0.00019681	1.1412E-07	579.8308690691199	82.179	0.92126	82.116	81.758	82.679	-0.062935					55	20	4	0	0	0	0.51307	2	8309	8309;8322		51.335	9.9088	1	354550			20137	4442	13645	13655	23217;23218	23217					0.07596363550896967
KEYIPPLIW	9	Unmodified	_KEYIPPLIW_					0	0	0		ENSG00000140526|ENST00000352732|ABHD2	ENSG00000140526|ENST00000352732|ABHD2	ENSG00000140526|ENST00000352732|ABHD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.8316040039062	2	579.831517	1157.64848	-0.03296	-1.9111E-05	0.063365	3.6741E-05	0.030405	1.763E-05	579.8313370706231	82.024	1.0108	82.082	81.677	82.688	0.057816					59	22	4	0	0	0	0.24527	4	8194	8164;8170;8194;8206		69.628	23.655	1	340990			20138	4442	13645	13655	23219;23220;23221;23222	23221					0.07596363550896967
KEYPRLGNL	9	Unmodified	_KEYPRLGNL_					0	0	0		MSTB1_dup2996|chr10:87245512-87245766:-|1.5134867153175602|0.377805891187829|2.0|62.0|16|3|anti-sense	MSTB1_dup2996|chr10:87245512-87245766:-|1.5134867153175602|0.377805891187829|2.0|62.0|16|3|anti-sense	MSTB1_dup2996|chr10:87245512-87245766:-|1.5134867153175602|0.377805891187829|2.0|62.0|16|3|anti-sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3067016601562	2	545.306198	1088.59784	-0.14303	-7.7996E-05	-0.24396	-0.00013303	-0.38699	-0.00021103	545.3060632440186	24.601	1.8516	24.273	23.461	25.312	-0.32825					98	41	5	0	0	0	0.44421	1	1254	1254		54.776	5.3348	1	6005700			20139	14722	13646	13656	23223	23223					0.057088342259021374
KEYPRLGNL	9	Unmodified	_KEYPRLGNL_					0	0	0		MSTB1_dup2996|chr10:87245512-87245766:-|1.5134867153175602|0.377805891187829|2.0|62.0|16|3|anti-sense	MSTB1_dup2996|chr10:87245512-87245766:-|1.5134867153175602|0.377805891187829|2.0|62.0|16|3|anti-sense	MSTB1_dup2996|chr10:87245512-87245766:-|1.5134867153175602|0.377805891187829|2.0|62.0|16|3|anti-sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3058471679688	2	545.306198	1088.59784	1.622	0.00088447	-1.9632	-0.0010705	-0.34119	-0.00018606	545.3051122101872	24.517	1.7889	24.003	23.196	24.985	-0.51365					105	40	6	0	0	0	0.33718	1	1167	1167		62.107	0.41614	1	6709400			20140	14722	13646	13656	23224	23224					0.057088342259021374
KFAKGCTK	8	Unmodified	_KFAKGCTK_					0	0	0			REV__ENSG00000267041|ENST00000591344|ZNF850	REV__ENSG00000267041|ENST00000591344|ZNF850	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.2528381347656	2	441.746931	881.479308	-0.28502	-0.00012591	-2.6512	-0.0011712	-2.9362	-0.0012971	441.7454188281783	26.024	1.0863	25.767	25.218	26.304	-0.2572					46	24	3	0	0	0	0.4196	1	1387	1387		32.812	3.6629	1	205570	+		20141	23966	13647	13657	23225	23225					0.03382763716547288
KFCRAQDL	8	Unmodified	_KFCRAQDL_					0	0	0		nc|ENSG00000114923|P48751-3|SLC4A3;ENSG00000114923|ENST00000358055|SLC4A3;nc|ENSG00000114923|P48751-2|SLC4A3;ENST00000425141.5_1_2:220498093-220506447:+|nuORF	nc|ENSG00000114923|P48751-3|SLC4A3	nc|ENSG00000114923|P48751-3|SLC4A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7492370605469	2	490.752744	979.490935	-0.70038	-0.00034372	-0.034508	-1.6935E-05	-0.73489	-0.00036065	490.75234378817703	81.975	0.54916	82.401	82.159	82.708	0.42645					18	13	2	0	0	0	0.4196	1	9452	9452		40.573	8.6178	1	145570			20142	14857	13648	13658	23226	23226					0.0003696073987384807
KFCSPIAIILL	11	Unmodified	_KFCSPIAIILL_					0	0	0		ENST00000396981.6_1_17:4173563-4173635:-|nuORF	ENST00000396981.6_1_17:4173563-4173635:-|nuORF	ENST00000396981.6_1_17:4173563-4173635:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.5834045410156	3	406.582394	1216.72535	0.73411	0.00029848	3.4176	0.0013896	4.1518	0.001688	406.5836914632484	112.22	0.2012	112.29	112.11	112.31	0.066025					13	6	3	0	0	0	0.76251	1	12079	12079		19.263	1.4295	1	189340			20143	11129	13649	13659	23227	23227					0.12565838775731208
KFCSPIAIILL	11	Unmodified	_KFCSPIAIILL_					0	0	0		ENST00000396981.6_1_17:4173563-4173635:-|nuORF	ENST00000396981.6_1_17:4173563-4173635:-|nuORF	ENST00000396981.6_1_17:4173563-4173635:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.58349609375	3	406.582394	1216.72535	5.5973	0.0022758	-1.4712	-0.00059815	4.1261	0.0016776	406.5816361168402	111.84	0.29085	111.87	111.73	112.02	0.032707					26	11	3	0	0	0	0.76579	1	13571	13571		18.531	1.3643	1	1379300			20144	11129	13649	13659	23228	23228					0.12565838775731208
KFDDIRIYF	9	Unmodified	_KFDDIRIYF_					0	0	0		ENSG00000124201|ENST00000396105|ZNFX1;nc|ENSG00000124201|Q9P2E3-2|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.82275390625	2	608.821681	1215.62881	0.021122	1.2859E-05	0.21307	0.00012972	0.23419	0.00014258	608.821709434247	70.914	0.91893	71.299	70.874	71.793	0.38449					61	21	4	0	0	0	0.18338	2	7877	7866;7877		77.318	10.085	1	1124500			20145	3316	13650	13660	23229;23230	23230					0.02961987540129485
KFDDIRIYF	9	Unmodified	_KFDDIRIYF_					0	0	0		ENSG00000124201|ENST00000396105|ZNFX1;nc|ENSG00000124201|Q9P2E3-2|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.8213500976562	2	608.821681	1215.62881	0.038915	2.3692E-05	0.25212	0.0001535	0.29104	0.00017719	608.82173629525	70.777	1.0624	71.325	70.925	71.987	0.54756					61	25	4	0	0	0	0.096326	2	7887	7887;7906		93.143	29.609	1	1380800			20146	3316	13650	13660	23231;23232	23231					0.02961987540129485
KFDRKQLRS	9	Unmodified	_KFDRKQLRS_					0	0	0		ENST00000497393.1_1_3:120469390-120469879:+|nuORF;ENSG00000153767|ENST00000283875|GTF2E1	ENST00000497393.1_1_3:120469390-120469879:+|nuORF	ENST00000497393.1_1_3:120469390-120469879:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3431396484375	2	589.343646	1176.67274	-0.36759	-0.00021664	-0.80413	-0.00047391	-1.1717	-0.00069055	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.78528	1	9499	9499		29.17	0.020503	1	11103000			20147	5238	13651	13661	23233	23233					0.09147016757128767
KFDRPALPAN	10	Unmodified	_KFDRPALPAN_					0	0	0		ENSG00000023516|ENST00000025301|AKAP11	ENSG00000023516|ENST00000025301|AKAP11	ENSG00000023516|ENST00000025301|AKAP11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	564.810546875	2	564.811648	1127.60874	1.4564	0.00082257	-3.5982	-0.0020323	-2.1418	-0.0012097	564.8095113497515	109.89	1.6808	109.93	109.61	111.29	0.033096					159	64	3	0	0	0	0.70553	1	12061	12061		44.377	7.9304	1	3333200			20148	859	13652	13662	23234	23234					0.05004236600166223
KFEELQKVL	9	Unmodified	_KFEELQKVL_					0	0	0		nc|ENSG00000138964|Q9HBI0-3|PARVG;nc|ENSG00000138964|Q9HBI0-2|PARVG;ENSG00000138964|ENST00000444313|PARVG	nc|ENSG00000138964|Q9HBI0-3|PARVG	nc|ENSG00000138964|Q9HBI0-3|PARVG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3299560546875	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.78058	1	9233	9233		30.504	2.4222	1	18558000			20149	4343	13653	13663	23235	23235					0.0881915819995811
KFFFLIYIYKY	11	Unmodified	_KFFFLIYIYKY_					0	0	0			REV__ENST00000449886.5_1_9:129597815-129598031:+|nuORF	REV__ENST00000449886.5_1_9:129597815-129598031:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7626953125	3	515.623246	1543.84791	0.58648	0.0003024	1.5557	0.00080217	2.1422	0.0011046	515.6240386793204	53.658	0.91462	54.072	53.622	54.537	0.4139					36	21	2	0	0	0	0.17863	1	5461	5461		9.6461	3.6451	1	225960	+		20150	26860	13654	13664	23236	23236					0.09773998778791793
KFFHMFGYLLL	11	Unmodified	_KFFHMFGYLLL_					0	0	0			REV__ENST00000521425.5_2_8:71486996-71487056:-|nuORF	REV__ENST00000521425.5_2_8:71486996-71487056:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.5090026855469	3	472.58966	1414.74715	-0.6259	-0.0002958	2.5872	0.0012227	1.9613	0.00092688	472.92523044298025	35.212	1.294	35.155	34.447	35.741	-0.056385					18	12	2	0	0	0	0.17462	1	2312	2312		27.047	0	1	52866	+		20151	28118	13655	13665	23237	23237					0.05636643524326246
KFFLPDNKFLR	11	Unmodified	_KFFLPDNKFLR_					0	0	0			REV__ENSG00000103642|ENST00000261893|LACTB	REV__ENSG00000103642|ENST00000261893|LACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	475.6086120605469	3	475.606478	1423.79761	-1.006	-0.00047844	3.7378	0.0017777	2.7319	0.0012993	475.6081091246618	17.032	0.41237	17.077	16.848	17.261	0.0457					33	16	3	0	0	0	0.76087	1	207	207		19.627	2.4602	1	93342	+		20152	17425	13656	13666	23238	23238					0.10265889173638243
KFGLPLPQLS	10	Unmodified	_KFGLPLPQLS_					0	0	0			REV__chr1:45700190-45708909|21|10.24|0.37|4.81|-|1|TE_info:AluSx1,AluSx1_dup3288,Alu,SINE,donor,+,45708909,45709063|IPP,None|1	REV__chr1:45700190-45708909|21|10.24|0.37|4.81|-|1|TE_info:AluSx1,AluSx1_dup3288,Alu,SINE,donor,+,45708909,45709063|IPP,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3278198242188	2	550.329142	1098.64373	-1.4511	-0.00079856	-2.4137	-0.0013283	-3.8647	-0.0021269	550.3279242402356	100.07	1.1382	100.24	99.716	100.85	0.17199					63	25	3	0	0	0	0.86587	1	10369	10369		29.17	0	1	345000	+		20153	15453	13657	13667	23239	23239					0.09835479408138781
KFHILKTG	8	Unmodified	_KFHILKTG_					0	0	0		nc|ENSG00000253534|A0A0A6YYG3|TRBV6-8	nc|ENSG00000253534|A0A0A6YYG3|TRBV6-8	nc|ENSG00000253534|A0A0A6YYG3|TRBV6-8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2877197265625	2	472.28982	942.565087	-0.91025	-0.0004299	-2.7735	-0.0013099	-3.6837	-0.0017398	472.2885293382865	99.077	1.813	99.3	98.699	100.51	0.22263					102	42	3	0	0	0	0.87922	1	10364	10364		31.955	2.8053	1	580890			20154	15290	13658	13668	23240	23240					0.0915067189371257
KFHLLHRCKES	11	Unmodified	_KFHLLHRCKES_					0	0	0			REV__ENST00000358465.6_1_1:114935905-114935968:-|nuORF	REV__ENST00000358465.6_1_1:114935905-114935968:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.5889892578125	3	466.587201	1396.73977	-0.023047	-1.0753E-05	4.4376	0.0020705	4.4145	0.0020598	466.58915281637627	58.428	0.8177	58.397	58.018	58.836	-0.030888					58	24	3	0	0	0	0.75121	1	5428	5428		21.78	0.74819	1	355430	+		20155	25435	13659	13669	23241	23241					0.05727303976550502
KFHLPVRVY	9	Unmodified	_KFHLPVRVY_					0	0	0		ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.8438720703125	2	579.842751	1157.67095	-0.90191	-0.00052297	3.3028	0.0019151	2.4009	0.0013921	579.8446027793001	102.43	1.6108	102.45	102.08	103.69	0.01989					83	39	4	0	0	0	0.78983	1	10982	10982		27.882	0.83493	1	1265800			20156	1337	13660	13670	23242	23242					0.09842007739166547
KFIQRVQAM	9	Unmodified	_KFIQRVQAM_					0	0	0		ENSG00000127947|ENST00000248594|PTPN12;ENST00000460731.5_1_7:77166863-77213036:+|nuORF	ENSG00000127947|ENST00000248594|PTPN12	ENSG00000127947|ENST00000248594|PTPN12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.8202514648438	2	560.818418	1119.62228	0.78776	0.00044179	1.6888	0.0009471	2.4765	0.0013889	560.8192753742564	92.439	2.8901	92.598	91.192	94.082	0.15874					209	68	4	0	0	0	0.7932	1	9413	9413		24.203	2.517	1	872010			20157	3519	13661	13671	23243	23243					0.06725771107767287
KFISIKSGLS	10	Unmodified	_KFISIKSGLS_					0	0	0			REV__Charlie4a_dup1182|chr6:27134946-27135350:-|1.93758124945859|0.3725470840403487|2.38|63.0|13|3|sense	REV__Charlie4a_dup1182|chr6:27134946-27135350:-|1.93758124945859|0.3725470840403487|2.38|63.0|13|3|sense	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.328857421875	2	540.326599	1078.63865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.56	1	114.49	113.99	114.99	-0.07								0	0	0	0.45132	1	12384	12384		21.686	1.689	1		+		20158	15403	13662	13672	23244	23244					0.10247175545532627
KFISRLRKEN	10	Unmodified	_KFISRLRKEN_					0	0	0		ENST00000514536.5_1_4:53464769-53497293:-|nuORF;nc|ENSG00000109189|P62068-4|USP46;nc|ENSG00000109189|P62068-3|USP46;ENSG00000109189|ENST00000441222|USP46	ENST00000514536.5_1_4:53464769-53497293:-|nuORF	ENST00000514536.5_1_4:53464769-53497293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	645.8840942382812	2	645.885678	1289.7568	0.94466	0.00061014	-4.2506	-0.0027454	-3.306	-0.0021353	645.8828437678978	105.63	1.0903	105.74	105.07	106.16	0.10765					79	27	3	0	0	0	0.8651	1	11264	11264		25.574	0	1	2734800			20159	2455	13663	13673	23245	23245					0.12351547854018463
KFIVHTVQ	8	Unmodified	_KFIVHTVQ_					0	0	0			REV__nc|ENSG00000147316|Q8NEM0-2|MCPH1	REV__nc|ENSG00000147316|Q8NEM0-2|MCPH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.81329345703125	2	486.287277	970.560001	0.69135	0.0003362	2.1747	0.0010575	2.866	0.0013937	486.28851577948234	32.736	0.80621	32.948	32.422	33.228	0.21168					29	18	2	0	0	0	0.4196	1	2269	2269		53.351	16.192	1	136440	+		20160	20064	13664	13674	23246	23246					0.07354368031087688
KFKALKLLI	9	Unmodified	_KFKALKLLI_					0	0	0			REV__nc|ENSG00000138346|P51530-4|DNA2	REV__nc|ENSG00000138346|P51530-4|DNA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.8834838867188	2	537.375895	1072.73724	3.5358	0.0019001	2.8681	0.0015413	6.4039	0.0034413	537.3774099102002	109.05	0.48517	109.03	108.73	109.21	-0.029381					47	18	3	0	0	0	0.7932	1	12070	12070		4.3163	0.33103	1	3929900	+		20161	19459	13665	13675	23247	23247					0.2037782358122513
KFKEFVRVK	9	Unmodified	_KFKEFVRVK_					0	0	0		ENSG00000025293|ENST00000374012|PHF20	ENSG00000025293|ENST00000374012|PHF20	ENSG00000025293|ENST00000374012|PHF20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8672485351562	2	590.863683	1179.71281	1.3812	0.0008161	3.8747	0.0022894	5.2559	0.0031055	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.78983	1	12696	12696		27.882	5.9224	1	6168400			20162	866	13666	13676	23248	23248					0.13014563427691428
KFKNVVKRRLF	11	Unmodified	_KFKNVVKRRLF_					0	0	0			REV__ENSG00000077063|ENST00000160373|CTTNBP2	REV__ENSG00000077063|ENST00000160373|CTTNBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.970947265625	3	478.973384	1433.89832	-0.25402	-0.00012167	2.9951	0.0014346	2.741	0.0013129	478.9747709878051	47.62	1.4426	47.532	47.242	48.685	-0.087646					53	40	2	0	0	0	0.7896	1	3689	3689		13.508	3.404	1	370120	+		20163	16734	13667	13677	23249	23249					0.19872965947160992
KFKNVVKRRLF	11	Unmodified	_KFKNVVKRRLF_					0	0	0			REV__ENSG00000077063|ENST00000160373|CTTNBP2	REV__ENSG00000077063|ENST00000160373|CTTNBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30950927734375	3	478.973384	1433.89832	-0.3619	-0.00017334	3.0729	0.0014719	2.711	0.0012985	478.9747142061381	50.735	1.3969	50.643	50.107	51.504	-0.091797					89	39	3	0	0	0	0.7896	1	4086	4086		13.508	5.8285	1	284170	+		20164	16734	13667	13677	23250	23250					0.19872965947160992
KFKNVVKRRLF	11	Unmodified	_KFKNVVKRRLF_					0	0	0			REV__ENSG00000077063|ENST00000160373|CTTNBP2	REV__ENSG00000077063|ENST00000160373|CTTNBP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2977294921875	3	478.973384	1433.89832	-0.40433	-0.00019366	2.4531	0.001175	2.0488	0.0009813	479.3087091048819	58.398	1.0278	58.79	58.079	59.107	0.39209					34	24	2	0	0	0	0.17911	1	6034	6034		13.508	10.297	1	204350	+		20165	16734	13667	13677	23251	23251					0.19872965947160992
KFKNVVKRRLF	11	Unmodified	_KFKNVVKRRLF_					0	0	0			REV__ENSG00000077063|ENST00000160373|CTTNBP2	REV__ENSG00000077063|ENST00000160373|CTTNBP2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	478.973384	1433.89832	-0.098661	-4.7256E-05	2.3227	0.0011125	2.224	0.0010652	478.97439674441455	58.931	1.2831	58.918	58.04	59.323	-0.013733	-0.059401	-0.00064178	NaN	13.508	59	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97821	+		20166	16734	13667	13677							0.19872965947160992
KFKNVVKRRLF	11	Unmodified	_KFKNVVKRRLF_					0	0	0			REV__ENSG00000077063|ENST00000160373|CTTNBP2	REV__ENSG00000077063|ENST00000160373|CTTNBP2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	478.973384	1433.89832	-0.88505	-0.00042392	3.3669	0.0016126	2.4818	0.0011887	478.97478976371366	58.996	0.90895	59.083	58.643	59.552	0.087002	0.10549	0.0008587	NaN	13.508	72	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171320	+		20167	16734	13667	13677							0.19872965947160992
KFKPRLSA	8	Unmodified	_KFKPRLSA_					0	0	0		nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	nc|ENSG00000095637|Q9BX66-12|SORBS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.7929992675781	2	473.795269	945.575986	-1.0572	-0.0005009	-2.9253	-0.001386	-3.9825	-0.0018869	473.793679724147	89.197	1.4239	89.197	88.751	90.174	0					63	32	3	0	0	0	0.86288	1	8644	8644		26.796	0	1	271460			20168	14803	13668	13678	23252	23252					0.10102074267979333
KFKQELNHQ	9	Unmodified	_KFKQELNHQ_					0	0	0		ENSG00000163840|ENST00000296161|DTX3L	ENSG00000163840|ENST00000296161|DTX3L	ENSG00000163840|ENST00000296161|DTX3L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.31201171875	2	586.314554	1170.61456	0.20543	0.00012045	-3.4845	-0.002043	-3.2791	-0.0019226	586.3124970689283	16.453	0.32045	15.855	15.74	16.06	-0.59873					15	6	3	0	0	0	0.55097	1	130	130		49.442	3.4693	1	638800			20169	5872	13669	13679	23253	23253					0.036073351118375285
KFKRTGYI	8	Unmodified	_KFKRTGYI_					0	0	0			REV__ENSG00000197629|ENST00000361050|MPEG1	REV__ENSG00000197629|ENST00000361050|MPEG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8000183105469	2	506.800552	1011.58655	0.050513	2.56E-05	-0.36872	-0.00018687	-0.31821	-0.00016127	506.80028093327485	25.966	0.97153	25.709	25.424	26.395	-0.25721					59	21	4	0	0	0	0.36305	1	1403	1403		84.916	5.4645	1	1527700	+		20170	23253	13670	13680	23254	23254					0.0812205692243424
KFKRTGYI	8	Unmodified	_KFKRTGYI_					0	0	0			REV__ENSG00000197629|ENST00000361050|MPEG1	REV__ENSG00000197629|ENST00000361050|MPEG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.8003234863281	2	506.800552	1011.58655	3.3125	0.0016788	-3.7434	-0.0018972	-0.43096	-0.00021841	506.7985401947884	26.02	1.0059	25.589	25.272	26.278	-0.4311					54	22	4	0	0	0	0.42407	1	1417	1417		79.451	13.648	1	1944600	+		20171	23253	13670	13680	23255	23255					0.0812205692243424
KFKTGLIH	8	Unmodified	_KFKTGLIH_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.28704833984375	2	472.28982	942.565087	-0.38046	-0.00017969	-3.8175	-0.001803	-4.198	-0.0019827	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.85277	1	11667	11667		25.45	1.2474	1	24731000			20172	7573	13671	13681	23256	23256					0.09150671893701201
KFKTQAET	8	Unmodified	_KFKTQAET_					0	0	0			REV__ENSG00000196208|ENST00000381486|GREB1	REV__ENSG00000196208|ENST00000381486|GREB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.7579040527344	2	476.758549	951.502546	-0.27895	-0.00013299	0.50648	0.00024147	0.22753	0.00010848	476.7586662154682	24.262	0.92163	24.216	23.918	24.84	-0.04598					41	20	3	0	0	0	0.91977	1	960	960		45.952	3.4775	1	107860	+		20173	23104	13672	13682	23257	23257					0.024854810348415413
KFLISNEKK	9	Unmodified	_KFLISNEKK_					0	0	0		nc|ENSG00000176601|Q56UN5-3|MAP3K19;ENSG00000176601|ENST00000392915|MAP3K19;nc|ENSG00000176601|Q56UN5-4|MAP3K19;nc|ENSG00000176601|Q56UN5-5|MAP3K19	nc|ENSG00000176601|Q56UN5-3|MAP3K19	nc|ENSG00000176601|Q56UN5-3|MAP3K19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.829833984375	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.77696	1	8392	8392		31.53	1.0262	1	1181400			20174	7090	13673	13683	23258	23258					0.10094577919812764
KFLLAPSH	8	Unmodified	_KFLLAPSH_					0	0	0			REV__nc|ENSG00000132003|Q9H7M6|ZSWIM4	REV__nc|ENSG00000132003|Q9H7M6|ZSWIM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7669372558594	2	456.76872	911.522887	0.70674	0.00032282	-3.0962	-0.0014142	-2.3894	-0.0010914	456.76699198798764	16.46	0.22921	16.377	16.291	16.52	-0.083363					20	10	3	0	0	0	0.88915	1	145	145		35.201	6.9464	1	172740	+		20175	18980	13674	13684	23259	23259					0.06358696485324344
KFMLGKVLTSR	11	Unmodified	_KFMLGKVLTSR_					0	0	0		ENSG00000152128|ENST00000281924|TMEM163;ENST00000476823.1_1_2:135214289-135223802:-|nuORF	ENSG00000152128|ENST00000281924|TMEM163	ENSG00000152128|ENST00000281924|TMEM163	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3792724609375	2	640.381383	1278.74821	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.866	1	29.978	29.478	30.478	0.11225								0	0	0	0.56276	1	1300	1300		36.447	4.9169	1				20176	5157	13675	13685	23260	23260					0.11998857893195236
KFMLVGKSH	9	Unmodified	_KFMLVGKSH_					0	0	0			REV__ENSG00000166317|ENST00000394810|SYNPO2L	REV__ENSG00000166317|ENST00000394810|SYNPO2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7933349609375	2	523.794412	1045.57427	0.20589	0.00010784	-1.096	-0.00057409	-0.89014	-0.00046625	523.7937468382506	19.848	1.1814	19.218	18.937	20.118	-0.6296					65	25	3	0	0	0	0.78983	1	563	563		27.882	1.0861	1	863270	+		20177	21279	13676	13686	23261	23261					0.05330697187741862
KFNNKVKA	8	Unmodified	_KFNNKVKA_					0	0	0			REV__ENSG00000119403|ENST00000373896|PHF19	REV__ENSG00000119403|ENST00000373896|PHF19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	474.7851867675781	2	474.784902	947.55525	0.4921	0.00023364	-1.3828	-0.00065655	-0.89073	-0.00042291	474.7841747430564	26.75	0.38884	26.791	26.607	26.996	0.040834					17	11	2	0	0	0	0.884	1	1157	1157		33.516	1.5607	1	28806	+		20178	18352	13677	13687	23262	23262					0.07937483888326824
KFNWRVIKEKR	11	Unmodified	_KFNWRVIKEKR_					0	0	0		nc|ENSG00000104687|P00390-5|GSR;nc|ENSG00000104687|P00390-4|GSR;nc|ENSG00000104687|P00390-3|GSR;ENSG00000104687|ENST00000221130|GSR;nc|ENSG00000104687|P00390-2|GSR	nc|ENSG00000104687|P00390-5|GSR	nc|ENSG00000104687|P00390-5|GSR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.9677734375	3	501.96841	1502.8834	1.4185	0.00071206	-1.9334	-0.00097052	-0.51491	-0.00025847	501.9674555649343	33.874	1.1122	34.179	33.871	34.984	0.30494					80	26	5	0	0	0	0.77205	1	2517	2517		17.167	4.2093	1	4207500			20179	2140	13678	13688	23263	23263					0.15207474079147687
KFPENSLTVYI	11	Unmodified	_KFPENSLTVYI_					0	0	0			REV__nc|ENSG00000175449|Q8TAC1|RFESD	REV__nc|ENSG00000175449|Q8TAC1|RFESD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.5721435546875	3	437.571211	1309.6918	0.085374	3.7357E-05	-2.8002	-0.0012253	-2.7148	-0.0011879	437.5697872232152	34.516	0.59225	34.461	34.237	34.829	-0.055149					52	24	3	0	0	0	0.74771	1	1757	1757		22.562	1.5294	1	130090	+		20180	22067	13679	13689	23264	23264					0.04934508537508009
KFPGLRVLTY	10	Unmodified	_KFPGLRVLTY_					0	0	0		nc|ENSG00000184611|Q9NS40-2|KCNH7;ENSG00000184611|ENST00000332142|KCNH7	nc|ENSG00000184611|Q9NS40-2|KCNH7	nc|ENSG00000184611|Q9NS40-2|KCNH7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3564453125	2	597.355691	1192.69683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.102	1	94.538	94.038	95.038	0.43539								0	0	0	0.45132	1	11268	11268		29.17	2.4771	1				20181	7629	13680	13690	23265	23265					0.10818857190793096
KFQNIVVEI	9	Unmodified	_KFQNIVVEI_					0	0	0		ENSG00000165895|ENST00000298815|ARHGAP42;ENST00000506020.5_1_4:148867718-148993229:+|nuORF;ENSG00000071205|ENST00000336498|ARHGAP10;ENSG00000079482|ENST00000355520|OPHN1	ENSG00000165895|ENST00000298815|ARHGAP42;ENSG00000079482|ENST00000355520|OPHN1	ENSG00000165895|ENST00000298815|ARHGAP42	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.31640625	2	545.318774	1088.623	-1.3538	-0.00073823	-2.3594	-0.0012866	-3.7132	-0.0020249	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.76255	1	10349	10349		35.618	0	1	5184000			20182	6133;1423	13681	13691	23266	23266					0.08222889028479585
KFRNIYQGVK	10	Unmodified	_KFRNIYQGVK_					0	0	0		nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8;ENSG00000124721|ENST00000327475|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2420654296875	3	418.24354	1251.70879	1.0772	0.00045052	-4.1231	-0.0017245	-3.0459	-0.0012739	418.24182739007693	17.262	0.77996	16.78	16.373	17.153	-0.48256					36	17	3	0	0	0	0.40664	1	238	238		63.534	10.445	1	374480			20183	3354	13682	13692	23267	23267					0.09300473933967623
KFRRNRFWVKV	11	Unmodified	_KFRRNRFWVKV_					0	0	0			REV__ENSG00000186103|ENST00000334384|ARGFX	REV__ENSG00000186103|ENST00000334384|ARGFX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.9756469726562	3	512.640516	1534.89972	0.88663	0.00045452	0.60994	0.00031268	1.4966	0.0007672	512.6408472601623	19.217	0.5245	18.748	18.495	19.019	-0.46967					33	11	4	0	0	0	0.80813	1	506	506		9.6461	0	1	175630	+		20184	22822	13683	13693	23268	23268					0.15366600035895317
KFSGAPLK	8	Unmodified	_KFSGAPLK_					0	0	0		nc|ENSG00000177034|Q5HYI7-2|MTX3;nc|ENSG00000177034|Q5HYI7-4|MTX3;ENSG00000177034|ENST00000512528|MTX3	nc|ENSG00000177034|Q5HYI7-2|MTX3	nc|ENSG00000177034|Q5HYI7-2|MTX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.25543212890625	2	424.255446	846.496338	1.1062	0.00046932	-0.59161	-0.00025099	0.51461	0.00021833	424.2550047858092	33.057	0.67409	33.269	32.935	33.609	0.21168					30	15	3	0	0	0	0.47906	1	2374	2374		76.847	2.33	1	650140			20185	7113	13684	13694	23269	23269					0.06695007593987157
KFTFLIVKR	9	Unmodified	_KFTFLIVKR_					0	0	0			REV__ENST00000367651.3_1_6:139693526-139693751:-|nuORF	REV__ENST00000367651.3_1_6:139693526-139693751:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3673706054688	2	576.368601	1150.72265	-2.5571	-0.0014738	1.6995	0.00097954	-0.85763	-0.00049431	576.3693880247914	40.386	2.6783	40.778	38.947	41.625	0.39209					154	68	5	0	0	0	0.7932	1	3431	3431		19.104	0.77911	1	8015200	+		20186	25575	13685	13695	23270	23270					0.15331751433086538
KFTLKKLLLLV	11	Unmodified	_KFTLKKLLLLV_					0	0	0		ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.30517578125	3	439.30737	1314.90028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.573	1	68.537	68.037	69.037	-0.036301								0	0	0	0.56276	1	6618	6618		3.026	0	1				20187	1155	13686	13696	23271	23271					0.2554258191241843
KFVAMKVVKSA	11	Unmodified	_KFVAMKVVKSA_					0	0	0		nc|ENSG00000096063|Q96SB4-3|SRPK1;ENST00000513367.1_1_6:35855779-35888866:-|nuORF;nc|ENSG00000096063|Q96SB4-4|SRPK1;ENSG00000096063|ENST00000373825|SRPK1	nc|ENSG00000096063|Q96SB4-3|SRPK1	nc|ENSG00000096063|Q96SB4-3|SRPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3674926757812	2	604.365201	1206.71585	-1.2751	-0.0007706	3.3813	0.0020435	2.1062	0.0012729	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.7144	1	10967	10967		29.17	1.2878	1	103250000			20188	14804	13687	13697	23272	23272					0.12076070490206803
KFVAMKVVKSA	11	Unmodified	_KFVAMKVVKSA_					0	0	0		nc|ENSG00000096063|Q96SB4-3|SRPK1;ENST00000513367.1_1_6:35855779-35888866:-|nuORF;nc|ENSG00000096063|Q96SB4-4|SRPK1;ENSG00000096063|ENST00000373825|SRPK1	nc|ENSG00000096063|Q96SB4-3|SRPK1	nc|ENSG00000096063|Q96SB4-3|SRPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3665161132812	2	604.365201	1206.71585	-1.2751	-0.00077064	4.1148	0.0024869	2.8397	0.0017162	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.73893	2	12314	12303;12314		24.519	0.99649	1	3346600			20189	14804	13687	13697	23273;23274	23274					0.12076070490206803
KFVKRKVMDKY	11	Unmodified	_KFVKRKVMDKY_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2;ENST00000608590.5_1_1:237955470-237994843:+|nuORF	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.28271484375	3	481.283118	1440.82753	-1.6759	-0.00080659	1.6164	0.00077796	-0.059483	-2.8628E-05	481.28381060861284	101.58	1.5224	101.74	100.8	102.32	0.15505					100	37	3	0	0	0	0.77803	1	10607	10607		15.921	0.58318	1	436410			20190	8298	13688	13698	23275	23275					0.1247450484734145
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.355224609375	2	611.354834	1220.69511	-0.22744	-0.00013904	3.0108	0.0018407	2.7834	0.0017016	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.72106	1	9583	9583		28.081	1.0342	1	8715400	+		20191	20936	13689	13699	23276	23276					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3536987304688	2	611.354834	1220.69511	-0.40518	-0.00024771	2.2197	0.001357	1.8145	0.0011093	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.67778	2	9754	9743;9754		35.152	5.7985	1	5373200	+		20192	20936	13689	13699	23277;23278	23278					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3577880859375	2	611.354834	1220.69511	-0.40504	-0.00024762	3.0705	0.0018771	2.6654	0.0016295	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.61369	2	10149	10041;10149		42.864	11.334	1	12417000	+		20193	20936	13689	13699	23279;23280	23280					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3551025390625	2	611.354834	1220.69511	2.1766	0.0013307	-0.33396	-0.00020417	1.8427	0.0011265	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.68532	3	9947	9888;9947;9983		33.922	5.8401	1	5823000	+		20194	20936	13689	13699	23281;23282;23283	23282					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3550415039062	2	611.354834	1220.69511	2.4219	0.0014807	0.063844	3.9032E-05	2.4858	0.0015197	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.68532	2	10324	10324;10360		33.922	6.8743	1	12656000	+		20195	20936	13689	13699	23284;23285	23284					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3548583984375	2	611.354834	1220.69511	0.21559	0.0001318	1.6628	0.0010166	1.8784	0.0011484	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.66929	2	9811	9811;9822		36.447	2.5251	1	5379900	+		20196	20936	13689	13699	23286;23287	23286					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3554077148438	2	611.354834	1220.69511	0.21646	0.00013233	2.3298	0.0014243	2.5463	0.0015567	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.638	5	10168	10144;10168;10180;10308;10319		40.058	9.7405	1	12399000	+		20197	20936	13689	13699	23288;23289;23290;23291;23292	23289					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.35546875	2	611.354834	1220.69511	1.142	0.00069816	1.5785	0.00096504	2.7205	0.0016632	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.72106	1	9826	9826		28.081	1.3886	1	17478000	+		20198	20936	13689	13699	23293	23293					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3609008789062	2	611.354834	1220.69511	0.8676	0.00053041	1.8536	0.0011332	2.7212	0.0016636	611.3560720152175	95.924	5.0581	96.087	95.071	100.13	0.16317					363	118	6	0	0	0	0.68532	1	9895	9895		33.922	10.399	1	16539000	+		20199	20936	13689	13699	23294	23294					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3551025390625	2	611.354834	1220.69511	-1.2523	-0.00076561	3.1276	0.0019121	1.8753	0.0011465	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.66929	1	9449	9449		36.447	9.3994	1	5978100	+		20200	20936	13689	13699	23295	23295					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3595581054688	2	611.354834	1220.69511	-1.2523	-0.00076562	3.9822	0.0024345	2.7298	0.0016689	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.72106	1	9836	9836		28.081	1.3886	1	16503000	+		20201	20936	13689	13699	23296	23296					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3536376953125	2	611.354834	1220.69511	1.8406	0.0011253	0.99243	0.00060673	2.833	0.001732	611.3554755611618	95.715	4.0888	96.135	95.146	99.235	0.42051					346	99	4	0	0	0	0.72106	1	11494	11494		28.081	0	1	11372000	+		20202	20936	13689	13699	23297	23297					0.0935948011056098
KFVKTANLVMA	11	Unmodified	_KFVKTANLVMA_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.355224609375	2	611.354834	1220.69511	0.93149	0.00056947	1.983	0.0012123	2.9145	0.0017818	611.3560842580883	95.783	3.9941	96.187	95.298	99.293	0.40451					337	97	4	0	0	0	0.66929	2	11526	11526;11562		36.447	9.7538	1	11629000	+		20203	20936	13689	13699	23298;23299	23298					0.0935948011056098
KFVKVFWIP	9	Unmodified	_KFVKVFWIP_					0	0	0		ENST00000434030.1_1_3:50310607-50311493:+|nuORF;nc|ENSG00000012171|Q13214-2|SEMA3B;ENSG00000012171|ENST00000616701|SEMA3B	ENST00000434030.1_1_3:50310607-50311493:+|nuORF	ENST00000434030.1_1_3:50310607-50311493:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3540649414062	2	582.35242	1162.69029	-0.28407	-0.00016543	2.207	0.0012852	1.9229	0.0011198	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.7932	1	11093	11093		18.324	0.062328	1	61091000			20204	798	13690	13700	23300	23300					0.11544964030076699
KFVNGKVKL	9	Unmodified	_KFVNGKVKL_					0	0	0			REV__ENST00000418154.1_1_1:64254543-64254969:-|nuORF	REV__ENST00000418154.1_1_1:64254543-64254969:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2650756835938	2	516.831852	1031.64915	-0.27207	-0.00014061	0.04481	2.3159E-05	-0.22726	-0.00011745	516.83159333407	45.197	0.73674	45.66	45.264	46	0.46313					27	17	2	0	0	0	0.20789	1	4215	4215		15.642	4.1308	1	331700	+		20205	26454	13691	13701	23301	23301					0.1345920299061163
KFVRLLRFSRL	11	Unmodified	_KFVRLLRFSRL_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A;REV__nc|ENSG00000169432|Q15858-4|SCN9A;REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF;REV__nc|ENSG00000144285|P35498-3|SCN1A;REV__ENSG00000185313|ENST00000449082|SCN10A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3094482421875	3	478.973384	1433.89832	-1.6306	-0.00078103	4.3048	0.0020619	2.6742	0.0012809	478.97540943407233	47.987	1.2617	47.987	47.56	48.821	0					77	38	3	0	0	0	0.78683	1	3780	3780		14.086	0.57807	1	195490	+		20206	15734;15736;19317;19879;22760	13692	13702	23302	23302					0.19872965947160992
KFVRLLRFSRL	11	Unmodified	_KFVRLLRFSRL_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A;REV__nc|ENSG00000169432|Q15858-4|SCN9A;REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF;REV__nc|ENSG00000144285|P35498-3|SCN1A;REV__ENSG00000185313|ENST00000449082|SCN10A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9761962890625	3	478.973384	1433.89832	-0.90815	-0.00043498	3.264	0.0015634	2.3558	0.0011284	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.81219	1	3364	3364		8.7993	0	1	368580	+		20207	15734;15736;19317;19879;22760	13692	13702	23303	23303					0.19872965947160992
KFVRLLRFSRL	11	Unmodified	_KFVRLLRFSRL_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A;REV__nc|ENSG00000169432|Q15858-4|SCN9A;REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF;REV__nc|ENSG00000144285|P35498-3|SCN1A;REV__ENSG00000185313|ENST00000449082|SCN10A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.30963134765625	3	478.973384	1433.89832	0.35245	0.00016881	1.7746	0.00084999	2.127	0.0010188	478.9741095971511	52.816	1.6716	52.886	52.36	54.032	0.070713					123	47	3	0	0	0	0.7896	1	4240	4240		13.508	0.55046	1	295530	+		20208	15734;15736;19317;19879;22760	13692	13702	23304	23304					0.19872965947160992
KFVSEDLHR	9	Unmodified	_KFVSEDLHR_					0	0	0		nc|ENSG00000146856|Q8NEM8|AGBL3;ENSG00000146856|ENST00000436302|AGBL3;nc|ENSG00000146856|Q8NEM8-2|AGBL3;nc|ENSG00000146856|Q8NEM8-3|AGBL3;ENST00000476700.5_1_7:134671329-134695013:+|nuORF	nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.8023681640625	2	565.80128	1129.58801	0.97156	0.00054971	2.7074	0.0015319	3.679	0.0020816	565.8026974133318	55.491	0.70451	56.059	55.7	56.404	0.56836					49	16	4	0	0	0	0.25483	1	5740	5740		68.787	10.005	1	2559400			20209	14977	13693	13703	23305	23305					0.02839646220513714
KFWRAPSR	8	Unmodified	_KFWRAPSR_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;ENST00000583043.5_1_18:67684852-67806940:-|nuORF	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.29833984375	2	524.295968	1046.57738	1.0584	0.00055493	4.1922	0.0021979	5.2506	0.0027529	524.2982857404894	16.529	0.234	16.606	16.475	16.709	0.07715					15	8	3	0	0	0	0.91472	1	109	109		44.117	0	1	52567			20210	7065	13694	13704	23306	23306					0.055957083567591326
KFWRAPSR	8	Unmodified	_KFWRAPSR_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;ENST00000583043.5_1_18:67684852-67806940:-|nuORF	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	524.295968	1046.57738	0.10388	5.4463E-05	5.9694	0.0031297	6.0733	0.0031842	524.2989340946283	16.789	0.26781	16.71	16.595	16.863	-0.079056	0.057042	0.0010408	NaN	44.117	14	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53743			20211	7065	13694	13704							0.055957083567591326
KFWRAPSR	8	Unmodified	_KFWRAPSR_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;ENST00000583043.5_1_18:67684852-67806940:-|nuORF	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	524.295968	1046.57738	1.0114	0.00053029	4.6208	0.0024227	5.6323	0.002953	524.2983467393341	16.724	0.16922	16.642	16.566	16.735	-0.082102	-0.010575	-0.00037336	NaN	44.117	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59295			20212	7065	13694	13704							0.055957083567591326
KFYFLRRA	8	Unmodified	_KFYFLRRA_					0	0	0		ENST00000544106.5_1_3:169501280-169504210:+|nuORF	ENST00000544106.5_1_3:169501280-169504210:+|nuORF	ENST00000544106.5_1_3:169501280-169504210:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.797607421875	2	550.821818	1099.62908	-1.7247	-0.00095	-4.1422	-0.0022816	-5.8669	-0.0032316	550.8205089664386	43.197	0.3277	43.63	43.46	43.788	0.4334					11	7	2	0	0	0	0.4196	1	3905	3905		18.324	0	1	216330			20213	13567	13695	13705	23307	23307					0.08325452050644344
KFYLTLPG	8	Unmodified	_KFYLTLPG_					0	0	0		ENSG00000147459|ENST00000276440|DOCK5	ENSG00000147459|ENST00000276440|DOCK5	ENSG00000147459|ENST00000276440|DOCK5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	469.7711181640625	2	469.770929	937.527304	-0.90444	-0.00042488	1.815	0.00085262	0.91054	0.00042775	469.77157425447143	38.829	1.0579	39.171	38.856	39.914	0.34187					52	24	3	0	0	0	0.89494	1	3219	3219		37.159	1.5408	1	909720			20214	4904	13696	13706	23308	23308					0.05604160908239919
KFYLTLPG	8	Unmodified	_KFYLTLPG_					0	0	0		ENSG00000147459|ENST00000276440|DOCK5	ENSG00000147459|ENST00000276440|DOCK5	ENSG00000147459|ENST00000276440|DOCK5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.7706604003906	2	469.770929	937.527304	-1.3683	-0.00064278	1.8094	0.00085002	0.44113	0.00020723	469.7717183606964	38.655	0.84388	39.177	38.87	39.714	0.52235					49	19	4	0	0	0	0.85277	2	3211	3211;3223		30.504	1.2474	1	845760			20215	4904	13696	13706	23309;23310	23309					0.05604160908239919
KGAAGGAP	8	Unmodified	_KGAAGGAP_					0	0	0			REV__ENST00000307201.4_1_17:27893625-27894141:-|nuORF	REV__ENST00000307201.4_1_17:27893625-27894141:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.6891479492188	1	628.341301	627.334024	-0.49103	-0.00030854	-0.12584	-7.9068E-05	-0.61687	-0.0003876	628.3393248233377	67.98	1.0452	68.039	67.53	68.575	0.059288					48	40	2	0	0	0	0.4196	1	6067	6067		8.8223	4.5061	1	69792	+		20216	24840	13697	13707	23311	23311					0.0054504391184764245
KGAAQPAKT	9	Unmodified	_KGAAQPAKT_					0	0	0			REV__ENSG00000138430|ENST00000284719|OLA1	REV__ENSG00000138430|ENST00000284719|OLA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.2534484863281	2	436.253434	870.492316	2.1857	0.00095352	1.2941	0.00056457	3.4798	0.0015181	436.2538705634068	114.35	2.7328	114.38	114.11	116.84	0.026459					117	82	2	0	0	0	0.7932	1	12642	12642		26.693	1.2427	1	78531	+		20217	19471	13698	13708	23312	23312					0.051889181002820806
KGADAKRK	8	Unmodified	_KGADAKRK_					0	0	0			REV__ENST00000261249.6_1_14:61438965-61439184:-|nuORF	REV__ENST00000261249.6_1_14:61438965-61439184:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2651672363281	2	437.266876	872.519199	1.5079	0.00065936	-3.8592	-0.0016875	-2.3513	-0.0010282	437.26518584977657	27.503	2.0915	27.248	26.544	28.636	-0.25465					92	49	2	0	0	0	0.86677	1	1561	1561		27.882	5.9224	1	428760	+		20218	24381	13699	13709	23313	23313					0.0778402671146523
KGADSAVFPRV	11	Unmodified	_KGADSAVFPRV_					0	0	0		ENSG00000101974|ENST00000682941|ATP11C;nc|ENSG00000101974|Q8NB49|ATP11C;nc|ENSG00000101974|Q8NB49-2|ATP11C;nc|ENSG00000101974|Q8NB49-3|ATP11C;nc|ENSG00000101974|Q8NB49-4|ATP11C;ENST00000460773.5_1_X:138814597-138879340:-|nuORF	ENSG00000101974|ENST00000682941|ATP11C;nc|ENSG00000101974|Q8NB49-4|ATP11C	nc|ENSG00000101974|Q8NB49-4|ATP11C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8170776367188	2	573.81693	1145.61931	-0.77927	-0.00044716	0.57434	0.00032957	-0.20493	-0.00011759	573.8171128348157	36.202	1.1773	36.211	35.659	36.837	0.0092773					66	25	4	0	0	0	0.45992	1	2311	2311		54.722	5.1863	1	690830			20219	1976;14823	13700	13710	23314	23314					0.052322192545943835
KGAGPLRGK	9	Unmodified	_KGAGPLRGK_					0	0	0		ENST00000411772.5_2_15:43699583-43738985:-|nuORF;ENST00000572085.5_1_15:43707600-43785241:-|nuORF;nc|ENSG00000067369|Q12888|TP53BP1;nc|ENSG00000067369|Q12888-3|TP53BP1;ENSG00000067369|ENST00000382044|TP53BP1	ENST00000411772.5_2_15:43699583-43738985:-|nuORF	ENST00000411772.5_2_15:43699583-43738985:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2769470214844	2	442.277244	882.539935	0.48637	0.00021511	-0.12005	-5.3096E-05	0.36632	0.00016201	442.2769926650736	16.833	0.38019	16.223	16.048	16.429	-0.6107					13	8	2	0	0	0	0.67345	1	181	181		42.396	1.8235	1	143620			20220	1183	13701	13711	23315	23315					0.09396617091135795
KGAGPLRGK	9	Unmodified	_KGAGPLRGK_					0	0	0		ENST00000411772.5_2_15:43699583-43738985:-|nuORF;ENST00000572085.5_1_15:43707600-43785241:-|nuORF;nc|ENSG00000067369|Q12888|TP53BP1;nc|ENSG00000067369|Q12888-3|TP53BP1;ENSG00000067369|ENST00000382044|TP53BP1	ENST00000411772.5_2_15:43699583-43738985:-|nuORF	ENST00000411772.5_2_15:43699583-43738985:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	442.277244	882.539935	0.081163	3.5896E-05	-0.012072	-5.3394E-06	0.06909	3.0557E-05	442.2771920652854	16.835	0.26308	16.348	16.189	16.452	-0.48718	0.062485	6.7443E-05	NaN	42.396	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112910			20221	1183	13701	13711							0.09396617091135795
KGAIDAKVHS	10	Unmodified	_KGAIDAKVHS_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153578959-153579424:-|nuORF	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.3792114257812	2	513.290548	1024.56654	0.33064	0.00016971	-0.59445	-0.00030513	-0.26381	-0.00013541	513.2901707556464	86.402	1.7247	86.845	85.703	87.428	0.44331					77	41	2	0	0	0	0.37624	1	9983	9983		37.812	0.78304	1	125920			20222	8114	13702	13712	23316	23316					0.055242611917947215
KGAKDYLN	8	Unmodified	_KGAKDYLN_					0	0	0			REV__ENSG00000163527|ENST00000295770|STT3B	REV__ENSG00000163527|ENST00000295770|STT3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.74468994140625	2	454.745442	907.476331	2.7644	0.0012571	-3.8708	-0.0017602	-1.1064	-0.00050315	454.74355172728065	103.83	1.5253	103.79	103.16	104.69	-0.043755					91	36	4	0	0	0	0.89494	1	11435	11435		37.159	0	1	836250	+		20223	20929	13703	13713	23317	23317					0.01889211863374385
KGAQERIDSL	10	Unmodified	_KGAQERIDSL_					0	0	0		nc|ENSG00000164244|Q96M27-5|PRRC1;ENSG00000164244|ENST00000296666|PRRC1;nc|ENSG00000164244|Q96M27-3|PRRC1;nc|ENSG00000164244|Q96M27-2|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.8041381835938	2	558.80402	1115.59349	-0.88613	-0.00049517	0.48242	0.00026958	-0.40371	-0.0002256	558.8042328855727	49.413	0.70857	49.41	49.092	49.8	-0.0030365					32	15	3	0	0	0	0.8545	1	4138	4138		36.447	5.9431	1	301140			20224	5942	13704	13714	23318	23318					0.04031325012351772
KGARNQIL	8	Unmodified	_KGARNQIL_					0	0	0			REV__nc|ENSG00000042753|P53680-2|AP2S1	REV__nc|ENSG00000042753|P53680-2|AP2S1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2743225097656	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.87922	1	11029	11029		31.955	3.7006	1	19085000	+		20225	16329	13705	13715	23319	23319					0.08152313228526964
KGASATKH	8	Unmodified	_KGASATKH_					0	0	0		nc|ENSG00000039560|Q9P0K7-4|RAI14;nc|ENSG00000039560|Q9P0K7-3|RAI14;ENSG00000039560|ENST00000265109|RAI14;nc|ENSG00000039560|Q9P0K7-2|RAI14	nc|ENSG00000039560|Q9P0K7-4|RAI14	nc|ENSG00000039560|Q9P0K7-4|RAI14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2267150878906	2	400.224677	798.434801	1.8836	0.00075385	2.9405	0.0011769	4.8241	0.0019307	400.22567128573456	34.872	1.5031	35.082	34.854	36.357	0.21003					89	38	3	0	0	0	0.89494	1	2614	2614		37.159	6.6555	1	1257500			20226	924	13706	13716	23320	23320					0.027520758947161994
KGCENCQCSK	10	Unmodified	_KGCENCQCSK_					0	0	0			REV__nc|ENSG00000189180|Q06730|ZNF33A	REV__nc|ENSG00000189180|Q06730|ZNF33A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3323974609375	2	550.220094	1098.42563	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.65	1	116.57	116.07	117.07	-0.082458								0	0	0	0.45132	1	12536	12536		23.523	1.5628	1		+		20227	23069	13707	13717	23321	23321					-0.11964144839794244
KGCKGPSQ	8	Unmodified	_KGCKGPSQ_					0	0	0			REV__ENSG00000054267|ENST00000264183|ARID4B	REV__ENSG00000054267|ENST00000264183|ARID4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7059326171875	2	402.705263	803.395972	1.6104	0.00064852	-1.0397	-0.0004187	0.57069	0.00022982	402.7048140873336	25.264	0.87722	24.936	24.476	25.353	-0.32825					41	19	4	0	0	0	0.9283	1	1278	1278		49.442	3.4896	1	275430	+		20228	16398	13708	13718	23322	23322					-0.013589727313274125
KGCKGPSQ	8	Unmodified	_KGCKGPSQ_					0	0	0			REV__ENSG00000054267|ENST00000264183|ARID4B	REV__ENSG00000054267|ENST00000264183|ARID4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.7051086425781	2	402.705263	803.395972	2.2434	0.00090341	-1.5378	-0.00061928	0.70555	0.00028413	402.70451563768495	25.251	1.0044	24.82	24.227	25.231	-0.4311					42	22	3	0	0	0	0.83456	1	1299	1299		60.972	3.1607	1	245890	+		20229	16398	13708	13718	23323	23323					-0.013589727313274125
KGCKGPSQ	8	Unmodified	_KGCKGPSQ_					0	0	0			REV__ENSG00000054267|ENST00000264183|ARID4B	REV__ENSG00000054267|ENST00000264183|ARID4B	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	402.705263	803.395972	-2.0991	-0.00084533	-1.8824	-0.00075806	-3.9815	-0.0016034	402.70450359812764	25.13	0.28366	25.13	24.94	25.223	0	0.11174	0.0014624	NaN	60.972	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18669	+		20230	16398	13708	13718							-0.013589727313274125
KGCLAHLIK	9	Unmodified	_KGCLAHLIK_					0	0	0			REV__ENSG00000198604|ENST00000360310|BAZ1A	REV__ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79608154296875	2	491.796955	981.579357	-0.25318	-0.00012451	-2.1971	-0.0010805	-2.4503	-0.001205	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.7932	1	3663	3663		21.96	0.25755	1	1502200	+		20231	23344	13709	13719	23324	23324					0.08783001050346684
KGDRILEVNHV	11	Unmodified	_KGDRILEVNHV_					0	0	0		nc|ENSG00000143376|Q96L92-3|SNX27;ENSG00000143376|ENST00000458013|SNX27	nc|ENSG00000143376|Q96L92-3|SNX27	nc|ENSG00000143376|Q96L92-3|SNX27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3589477539062	2	640.359493	1278.70443	-0.067952	-4.3514E-05	-0.91045	-0.00058301	-0.9784	-0.00062653	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.69248	1	10601	10601		32.751	7.1765	1	640120			20232	4623	13710	13720	23325	23325					0.07622964720439995
KGDSSKII	8	Unmodified	_KGDSSKII_					0	0	0			REV__ENST00000380325.3_1_20:3028531-3028840:+|nuORF	REV__ENST00000380325.3_1_20:3028531-3028840:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2509460449219	2	424.247818	846.481082	1.7473	0.00074129	3.0934	0.0013124	4.8407	0.0020537	424.24914320373654	97.534	1.7612	97.919	97.159	98.92	0.38548					75	42	3	0	0	0	0.73851	1	11749	11749		65.803	4.8312	1	775170	+		20233	25947	13711	13721	23326	23326					0.05170096006156655
KGEEVVGP	8	Unmodified	_KGEEVVGP_					0	0	0			REV__chr12:43432468-43432601|31|26.0|0.0|14.41|-|1|ADAMTS20,ADAMTS20|1	REV__chr12:43432468-43432601|31|26.0|0.0|14.41|-|1|ADAMTS20,ADAMTS20|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.72088623046875	2	407.718893	813.423233	2.692	0.0010976	1.3451	0.00054843	4.0371	0.001646	407.71961983038284	102.12	1.3069	102.42	101.63	102.94	0.29865					72	31	4	0	0	0	0.884	1	12470	12470		33.516	1.5607	1	5871700	+		20234	15529	13712	13722	23327	23327					0.009058340807200693
KGEPVISVKTT	11	Unmodified	_KGEPVISVKTT_					0	0	0		ENSG00000130254|ENST00000252542|SAFB2	ENSG00000130254|ENST00000252542|SAFB2	ENSG00000130254|ENST00000252542|SAFB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.8441162109375	2	579.840071	1157.66559	3.115	0.0018062	3.3738	0.0019563	6.4888	0.0037625	579.8421153406522	102.31	1.4996	102.26	101.49	102.99	-0.047005					86	35	4	0	0	0	0.67778	1	11147	11147		35.152	3.1972	1	1243200			20235	3627	13713	13723	23328	23328					0.09306239366037516
KGEVRRQKPI	10	Unmodified	_KGEVRRQKPI_					0	0	0			REV__nc|ENSG00000172493|P51825|AFF1	REV__nc|ENSG00000172493|P51825|AFF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.87255859375	2	605.872571	1209.73059	2.1215	0.0012854	-2.3851	-0.001445	-0.26355	-0.00015968	605.870912508801	99.925	1.6378	100.29	99.878	101.52	0.36292					110	40	4	0	0	0	0.8505	1	12136	12136		19.104	1.7386	1	1159400	+		20236	21837	13714	13724	23329	23329					0.13411278682565353
KGFHKAGS	8	Unmodified	_KGFHKAGS_					0	0	0		nc|ENSG00000249481|Q496A3-2|SPATS1;ENSG00000249481|ENST00000674044|SPATS1	nc|ENSG00000249481|Q496A3-2|SPATS1	nc|ENSG00000249481|Q496A3-2|SPATS1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.2276306152344	2	416.22722	830.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.008	1	42.705	42.205	43.205	0.69754								0	0	0	0.29497	1	3731	3731		34.173	0.65696	1				20237	8838	13715	13725	23330	23330					0.017883797573290394
KGFSQRAYLQ	10	Unmodified	_KGFSQRAYLQ_					0	0	0		ENSG00000062370|ENST00000354340|ZNF112;nc|ENSG00000062370|Q9UJU3|ZNF112	ENSG00000062370|ENST00000354340|ZNF112	ENSG00000062370|ENST00000354340|ZNF112	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.317138671875	2	599.32238	1196.63021	0.5273	0.00031602	-0.38836	-0.00023275	0.13895	8.3273E-05	599.3217465646096	59.463	0.68615	59.577	59.217	59.903	0.11396					33	19	2	0	0	0	0.8545	1	5136	5136		36.447	1.2685	1	238140			20238	1084	13716	13726	23331	23331					0.03975621628887893
KGGAASILVDF	11	Unmodified	_KGGAASILVDF_					0	0	0			REV__ENST00000456101.6_1_6:109773431-109775944:-|nuORF	REV__ENST00000456101.6_1_6:109773431-109775944:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.7279663085938	2	539.300581	1076.58661	-1.2259	-0.00066112	0.43156	0.00023274	-0.79432	-0.00042838	539.30071096102	60.728	0.53766	61.117	60.784	61.322	0.38945					33	14	3	0	0	0	0.1731	1	6417	6417		21.686	2.3258	1	718290	+		20239	19236	13717	13727	23332	23332					0.05138012131760661
KGGAGGKG	8	Unmodified	_KGGAGGKG_					0	0	0		nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.920166015625	1	631.3522	630.344923	-0.46418	-0.00029306	2.7626	0.0017442	2.2984	0.0014511	631.3537369862183	73.136	3.2404	73.136	71.37	74.611	0					364	144	4	0	0	0	0.88151	1	6488	6488		7.6903	0	1	20843000			20240	5073	13718	13728	23333	23333					0.01496446286137143
KGGAGGKG	8	Unmodified	_KGGAGGKG_					0	0	0		nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	631.3543701171875	1	631.3522	630.344923	-0.52633	-0.0003323	2.713	0.0017128	2.1866	0.0013805	631.3537209899879	72.8	3.8214	72.76	71.044	74.865	-0.04039					376	153	5	0	0	0	0.86906	1	6948	6948		8.2313	0	1	23627000			20241	5073	13718	13728	23334	23334					0.01496446286137143
KGGAGGKG	8	Unmodified	_KGGAGGKG_					0	0	0		nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	631.3575439453125	1	631.3522	630.344923	0.72143	0.00045548	2.8453	0.0017964	3.5667	0.0022519	631.3538712558682	77.574	1.5701	77.711	77.059	78.629	0.13667					89	63	2	0	0	0	0.83058	1	7273	7273		12.959	0	1	232950			20242	5073	13718	13728	23335	23335					0.01496446286137143
KGGAGGKG	8	Unmodified	_KGGAGGKG_					0	0	0		nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		1	631.3522	630.344923	-0.39956	-0.00025226	4.8208	0.0030437	4.4213	0.0027914	631.3554155963024	77.621	0.46832	77.621	77.329	77.797	0	-0.056767	0.0012156	NaN	12.959	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	245050			20243	5073	13718	13728							0.01496446286137143
KGGAGGKG	8	Unmodified	_KGGAGGKG_					0	0	0		nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		1	631.3522	630.344923	0.43188	0.00027267	3.6405	0.0022984	4.0724	0.0025711	631.3546009784117	77.659	1.2228	77.709	77.629	78.852	0.04969	0.031097	0.00047037	NaN	12.959	61	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	190370			20244	5073	13718	13728							0.01496446286137143
KGGAGGKG	8	Unmodified	_KGGAGGKG_					0	0	0		nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	nc|ENSG00000150593|Q53EL6-2|PDCD4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		1	631.3522	630.344923	1.4024	0.00088544	2.0561	0.0012981	3.4585	0.0021836	631.3534357059286	77.546	1.6479	77.671	77.018	78.666	0.12486	-0.0072898	-0.00052993	NaN	12.959	96	66	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	221780			20245	5073	13718	13728							0.01496446286137143
KGGCILKP	8	Unmodified	_KGGCILKP_					0	0	0			REV__ENST00000492815.5_1_14:69676187-69701514:+|nuORF	REV__ENST00000492815.5_1_14:69676187-69701514:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.5427551269531	2	408.244024	814.473494	0.38429	0.00015689	2.6919	0.0010989	3.0762	0.0012558	408.24516522357914	56.473	0.3088	57.033	56.832	57.141	0.55954					9	6	2	0	0	0	0.4196	1	5857	5857		18.324	10.093	1	131050	+		20246	16820	13719	13729	23336	23336					0.05883665204862609
KGGFLKMA	8	Unmodified	_KGGFLKMA_					0	0	0			REV__nc|ENSG00000184675|Q5JTC6-2|AMER1	REV__nc|ENSG00000184675|Q5JTC6-2|AMER1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.2459411621094	2	426.244024	850.473494	1.0559	0.00045007	3.7099	0.0015813	4.7658	0.0020314	426.2455229557475	87.647	3.9379	87.573	85.625	89.563	-0.074005					153	92	2	0	0	0	0.86288	1	9101	9101		26.796	0	1	4306400	+		20247	22698	13720	13730	23337	23337					0.042276652048713004
KGGFLKMA	8	Unmodified	_KGGFLKMA_					0	0	0			REV__nc|ENSG00000184675|Q5JTC6-2|AMER1	REV__nc|ENSG00000184675|Q5JTC6-2|AMER1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2459411621094	2	426.244024	850.473494	2.6022	0.0011092	2.1484	0.00091576	4.7507	0.0020249	426.2448505635507	87.493	3.3011	87.546	86.187	89.488	0.053024					131	77	2	0	0	0	0.80706	2	8970	8957;8970		25.45	0.94616	1	4266000	+		20248	22698	13720	13730	23338;23339	23339					0.042276652048713004
KGGFLKMA	8	Unmodified	_KGGFLKMA_					0	0	0			REV__nc|ENSG00000184675|Q5JTC6-2|AMER1	REV__nc|ENSG00000184675|Q5JTC6-2|AMER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.24609375	2	426.244024	850.473494	0.61593	0.00026254	4.191	0.0017864	4.8069	0.0020489	426.24572360202285	87.518	4.0945	87.668	85.602	89.696	0.14956					180	96	4	0	0	0	0.87922	1	8631	8631		31.955	7.4508	1	3688500	+		20249	22698	13720	13730	23340	23340					0.042276652048713004
KGGGSGGGG	9	Unmodified	_KGGGSGGGG_					0	0	0			REV__ENSG00000159248|ENST00000290374|GJD2	REV__ENSG00000159248|ENST00000290374|GJD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.2943725585938	1	633.295079	632.287802	1.4065	0.00089074	1.1061	0.00070051	2.5127	0.0015913	633.2956862468621	64.24	2.5253	64.36	63.01	65.535	0.12005					152	108	2	0	0	0	0.7932	2	5697	5697;5722		23.042	3.6825	1	215710	+		20250	20647	13721	13731	23341;23342	23341					-0.043050209902389724
KGGGSGGGG	9	Unmodified	_KGGGSGGGG_					0	0	0			REV__ENSG00000159248|ENST00000290374|GJD2	REV__ENSG00000159248|ENST00000290374|GJD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.297119140625	1	633.295079	632.287802	-0.33818	-0.00021417	2.814	0.0017821	2.4758	0.0015679	633.296805429476	64.635	2.7964	64.673	62.801	65.598	0.037849					198	115	2	0	0	0	0.7932	3	5666	5666;5708;5751		21.96	4.5949	1	214370	+		20251	20647	13721	13731	23343;23344;23345	23343					-0.043050209902389724
KGGGSGGGG	9	Unmodified	_KGGGSGGGG_					0	0	0			REV__ENSG00000159248|ENST00000290374|GJD2	REV__ENSG00000159248|ENST00000290374|GJD2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		1	633.295079	632.287802	1.4065	0.00089074	1.1061	0.00070051	2.5127	0.0015913	633.2956862468621	64.24	2.5253	64.36	63.01	65.535	0.12005	0.22163	-0.00072024	NaN	23.042	152	108	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	215710	+		20252	20647	13721	13731							-0.043050209902389724
KGGIWRVI	8	Unmodified	_KGGIWRVI_					0	0	0		ENSG00000165943|ENST00000298894|MOAP1	ENSG00000165943|ENST00000298894|MOAP1	ENSG00000165943|ENST00000298894|MOAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.7906799316406	2	464.789987	927.565421	-0.072724	-3.3801E-05	1.6528	0.00076819	1.58	0.00073439	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.7961	1	2053	2053		17.365	0	1	297050			20253	6141	13722	13732	23346	23346					0.09874091613551172
KGGKRPGL	8	Unmodified	_KGGKRPGL_					0	0	0			REV__ENSG00000147234|ENST00000683843|FRMPD3	REV__ENSG00000147234|ENST00000683843|FRMPD3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25762939453125	2	406.758687	811.502821	-1.0778	-0.00043841	0.35856	0.00014585	-0.71926	-0.00029256	406.7591839938256	64.075	0.44515	64.106	63.872	64.317	0.030243					28	17	2	0	0	0	0.4196	1	5653	5653		38.806	0	1	44733	+		20254	20061	13723	13733	23347	23347					0.08952945545377133
KGGKRSLS	8	Unmodified	_KGGKRSLS_					0	0	0		ENSG00000103343|ENST00000268655|ZNF174	ENSG00000103343|ENST00000268655|ZNF174	ENSG00000103343|ENST00000268655|ZNF174	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7542724609375	2	416.753601	831.49265	0.85655	0.00035697	2.7214	0.0011341	3.5779	0.0014911	416.7546905427035	66.077	1.7412	66.462	65.937	67.678	0.38581					138	48	4	0	0	0	0.81184	1	7277	7277		19.997	2.6318	1	3980900			20255	2077	13724	13734	23348	23348					0.07016337820130047
KGGKRSSRGKR	11	Unmodified	_KGGKRSSRGKR_					0	0	0			REV__ENST00000527206.1_1_11:118992311-118998053:+|nuORF	REV__ENST00000527206.1_1_11:118992311-118998053:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.58331298828125	3	406.249688	1215.72723	3.1409	0.001276	-4.2642	-0.0017323	-1.1234	-0.00045637	406.24731251758544	112.95	0.35545	112.98	112.85	113.21	0.030602					32	16	3	0	0	0	0.75121	1	13659	13659		21.78	0.094677	1	70867	+		20256	28225	13725	13735	23349	23349					0.12800028628566906
KGGLPGGLL	9	Unmodified	_KGGLPGGLL_					0	0	0			REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5641174316406	2	406.255446	810.496338	-0.18893	-7.6755E-05	3.9628	0.0016099	3.7739	0.0015332	406.2570488406529	60.976	1.3331	60.963	59.824	61.157	-0.012203					54	40	2	0	0	0	0.20789	1	5531	5531		31.955	7.7521	1	117220	+		20257	18364	13726	13736	23350	23350					0.08351007594001203
KGGLPGGLL	9	Unmodified	_KGGLPGGLL_					0	0	0			REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2574462890625	2	406.255446	810.496338	0.30765	0.00012498	3.5124	0.0014269	3.8201	0.0015519	406.25678410924326	53.54	1.1084	53.622	53.061	54.17	0.081528					62	29	3	0	0	0	0.20789	1	4448	4448		17.365	9.1337	1	221780	+		20258	18364	13726	13736	23351	23351					0.08351007594001203
KGGLPGGLL	9	Unmodified	_KGGLPGGLL_					0	0	0			REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.255446	810.496338	-1.6793	-0.00068222	5.8406	0.0023728	4.1613	0.0016905	406.2577092218634	53.735	1.5121	53.735	53.251	54.763	0	0.11019	0.0013073	NaN	17.365	79	48	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	170010	+		20259	18364	13726	13736							0.08351007594001203
KGGLPGGLL	9	Unmodified	_KGGLPGGLL_					0	0	0			REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.255446	810.496338	-0.70199	-0.00028519	4.6417	0.0018857	3.9398	0.0016005	406.25726489892054	53.551	1.4511	53.526	52.947	54.398	-0.02475	-0.099063	0.00033324	NaN	17.365	78	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	227020	+		20260	18364	13726	13736							0.08351007594001203
KGGLPGGLL	9	Unmodified	_KGGLPGGLL_					0	0	0			REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.255446	810.496338	2.1519	0.00087424	1.8461	0.00074999	3.9981	0.0016242	406.2561560752657	53.769	1.4354	53.792	53.085	54.521	0.022541	0.16628	-0.0019382	NaN	17.365	68	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199320	+		20261	18364	13726	13736							0.08351007594001203
KGGLPGGLL	9	Unmodified	_KGGLPGGLL_					0	0	0			REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.8774	-0.0007627	5.6233	0.0022845	3.7459	0.0015218	406.2576964267342	53.478	1.3384	53.526	53.133	54.471	0.047806	-0.099063	0.0011308	NaN	17.365	83	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	202190	+		20262	18364	13726	13736							0.08351007594001203
KGGLPGGLL	9	Unmodified	_KGGLPGGLL_					0	0	0			REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.8645	-0.00075745	5.3118	0.002158	3.4474	0.0014005	406.2574798196332	60.974	0.77203	61.075	60.468	61.24	0.10082	0.011425	0.00067265	NaN	31.955	53	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186650	+		20263	18364	13726	13736							0.08351007594001203
KGGLPGGLL	9	Unmodified	_KGGLPGGLL_					0	0	0			REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	406.255446	810.496338	-0.69344	-0.00028171	4.1886	0.0017016	3.4951	0.0014199	406.25708193751956	53.552	1.3699	53.49	52.52	53.89	-0.062065	-0.13533	-3.4966E-05	NaN	17.365	67	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	279110	+		20264	18364	13726	13736							0.08351007594001203
KGGLPGGLL	9	Unmodified	_KGGLPGGLL_					0	0	0			REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	REV__ENST00000556170.5_1_14:75553702-75572727:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	406.255446	810.496338	-0.94583	-0.00038425	4.5872	0.0018636	3.6414	0.0014793	406.2572103673367	60.988	2.0483	60.996	59.133	61.181	0.0081177	-0.067688	8.3863E-05	NaN	31.955	103	70	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	277500	+		20265	18364	13726	13736							0.08351007594001203
KGGPDKGR	8	Unmodified	_KGGPDKGR_					0	0	0			REV__ENSG00000222046|ENST00000409358|DCDC2B	REV__ENSG00000222046|ENST00000409358|DCDC2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7845458984375	2	407.730126	813.4457	1.1386	0.00046422	3.6142	0.0014736	4.7528	0.0019378	407.73106807641426	34.671	0.28422	35.052	34.852	35.136	0.3812					10	6	2	0	0	0	0.4196	1	2596	2596		16.473	1.809	1	162460	+		20266	23725	13727	13737	23352	23352					0.03151478269001018
KGGPKKTKREK	11	Unmodified	_KGGPKKTKREK_					0	0	0		ENSG00000154767|ENST00000285021|XPC;nc|ENSG00000154767|Q01831-2|XPC	ENSG00000154767|ENST00000285021|XPC	ENSG00000154767|ENST00000285021|XPC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.5995178222656	3	419.598094	1255.77245	1.7793	0.00074657	1.9244	0.00080747	3.7036	0.001554	419.5987701797605	24.325	1.1367	23.811	23.408	24.544	-0.51365					65	23	4	0	0	0	0.46531	1	1154	1154		54.343	12.005	1	934580			20267	5295	13728	13738	23353	23353					0.1547983437108087
KGGPVFVF	8	Unmodified	_KGGPVFVF_					0	0	0			REV__ENST00000317568.9_1_11:65179968-65180214:+|nuORF	REV__ENST00000317568.9_1_11:65179968-65180214:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.774658203125	2	425.744714	849.474875	0.34484	0.00014681	1.3091	0.00055736	1.654	0.00070417	425.7450746133819	37.685	0.53131	37.998	37.705	38.236	0.31312					21	13	3	0	0	0	0.4196	1	3037	3037		28.254	0	1	177750	+		20268	24965	13729	13739	23354	23354					0.04411622565282869
KGGRINFGLQ	10	Unmodified	_KGGRINFGLQ_					0	0	0			REV__ENSG00000120509|ENST00000239666|PDZD11	REV__ENSG00000120509|ENST00000239666|PDZD11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3123779296875	2	545.311815	1088.60908	-1.0948	-0.00059701	1.111	0.00060582	0.016144	8.8033E-06	545.3122619949064	27.51	0.56813	27.334	27.105	27.673	-0.17559					26	12	3	0	0	0	0.8608	1	1598	1598		34.173	0.65696	1	342280	+		20269	18416	13730	13740	23355	23355					0.06831656320036927
KGGRKGGGGGG	11	Unmodified	_KGGRKGGGGGG_					0	0	0			REV__ENSG00000141385|ENST00000269143|AFG3L2	REV__ENSG00000141385|ENST00000269143|AFG3L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	444.2454833984375	2	444.243932	886.473312	1.4251	0.00063311	2.4607	0.0010932	3.8859	0.0017263	444.24485409277173	107.1	1.0795	107.21	106.82	107.9	0.10396					105	39	3	0	0	0	0.63176	1	13083	13083		40.778	4.3314	1	6005700	+		20270	19679	13731	13741	23356	23356					0.025533815292646977
KGGRRLLIL	9	Unmodified	_KGGRRLLIL_					0	0	0			REV__ENST00000584588.5_1_17:38027782-38031519:+|nuORF	REV__ENST00000584588.5_1_17:38027782-38031519:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.2922973632812	2	513.350743	1024.68693	0.25504	0.00013093	-0.34781	-0.00017855	-0.092767	-4.7622E-05	513.350424768884	52.392	2.9456	52.816	51.77	54.715	0.42348					119	70	2	0	0	0	0.20789	1	5471	5471		16.473	0	1	538020	+		20271	29083	13732	13742	23357	23357					0.17557713976088962
KGGYGRVYKV	10	Unmodified	_KGGYGRVYKV_					0	0	0		nc|ENSG00000086232|Q9BQI3-2|EIF2AK1;ENSG00000086232|ENST00000199389|EIF2AK1	nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.8226318359375	2	563.822015	1125.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.942	1	27.051	26.551	27.551	0.10901								0	0	0	0.45132	1	1051	1051		26.693	3.6504	1				20272	1554	13733	13743	23358	23358					0.07168826979818732
KGHPPLPQGPA	11	Unmodified	_KGHPPLPQGPA_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3267211914062	2	549.806365	1097.59818	0.33469	0.00018401	2.4482	0.001346	2.7828	0.00153	550.3075603058967	37.764	0.14415	37.706	37.615	37.759	-0.057915					7	5	2	0	0	0	0.1729	1	2175	2175		14.137	0	1	29087	+		20273	22907	13734	13744	23359	23359					0.05328253945776851
KGHSQVLQ	8	Unmodified	_KGHSQVLQ_					0	0	0		ENST00000465476.1_1_3:101573497-101574322:+|nuORF;nc|ENSG00000144802|Q9BYH8-3|NFKBIZ;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ;ENSG00000144802|ENST00000326172|NFKBIZ	ENST00000465476.1_1_3:101573497-101574322:+|nuORF	ENST00000465476.1_1_3:101573497-101574322:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.7512512207031	2	448.751059	895.487565	-1.1604	-0.00052074	1.4696	0.00065951	0.30923	0.00013877	448.75149624669854	27.493	1.0894	27.318	27.016	28.105	-0.17559					64	24	5	0	0	0	0.72312	1	1601	1601		66.429	3.123	1	1128500			20274	4732	13735	13745	23360	23360					0.03564033957513857
KGHSQVLQ	8	Unmodified	_KGHSQVLQ_					0	0	0		ENST00000465476.1_1_3:101573497-101574322:+|nuORF;nc|ENSG00000144802|Q9BYH8-3|NFKBIZ;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ;ENSG00000144802|ENST00000326172|NFKBIZ	ENST00000465476.1_1_3:101573497-101574322:+|nuORF	ENST00000465476.1_1_3:101573497-101574322:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.75115966796875	2	448.751059	895.487565	1.4422	0.00064719	-1.4065	-0.00063119	0.03567	1.6007E-05	448.75032560333665	27.525	0.95263	27.271	26.945	27.897	-0.25465					48	21	3	0	0	0	0.11507	1	1614	1614		116.9	0	1	1108300			20275	4732	13735	13745	23361	23361					0.03564033957513857
KGIIPLSAI	9	Unmodified	_KGIIPLSAI_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2;ENST00000508066.1_1_4:36162071-36231213:-|nuORF	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30133056640625	2	456.299853	910.585153	0.25824	0.00011784	2.0816	0.00094982	2.3398	0.0010677	456.3006554004226	45.028	1.9814	45.077	44.089	46.07	0.048996					97	49	3	0	0	0	0.77546	1	3197	3197		31.955	5.1588	1	456360			20276	959	13736	13746	23362	23362					0.1262842283365444
KGILKKKCL	9	Unmodified	_KGILKKKCL_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2;ENST00000489018.1_1_1:109815040-109816668:+|nuORF	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	515.8048095703125	2	515.843905	1029.67326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.1	1	119.1	118.6	119.6	0								0	0	0	0.36143	1	12098	12098		3.9852	0	1				20277	4602	13737	13747	23363	23363					0.1596072015261143
KGIQVFLAII	10	Unmodified	_KGIQVFLAII_					0	0	0			REV__ENSG00000178538|ENST00000317995|CA8	REV__ENSG00000178538|ENST00000317995|CA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.3543701171875	2	551.35516	1100.69577	0.064242	3.542E-05	-2.5685	-0.0014162	-2.5043	-0.0013807	551.3534450206266	19.407	0.69387	18.937	18.609	19.303	-0.46967					17	14	2	0	0	0	0.85694	1	532	532		21.96	4.5949	1	52234	+		20278	22284	13738	13748	23364	23364					0.1494464282188801
KGIRPVLGQPE	11	Unmodified	_KGIRPVLGQPE_					0	0	0		ENSG00000154237|ENST00000388948|LRRK1;ENST00000525284.5_1_15:101565016-101602660:+|nuORF	ENSG00000154237|ENST00000388948|LRRK1	ENSG00000154237|ENST00000388948|LRRK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3568725585938	2	597.35368	1192.69281	2.4166	0.0014436	0.49195	0.00029387	2.9086	0.0017374	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.72106	1	10073	10073		28.081	0.19925	1	8047600			20279	5264	13739	13749	23365	23365					0.10416767697097384
KGITLIPEP	9	Unmodified	_KGITLIPEP_					0	0	0		ENST00000523638.5_1_19:37019440-37019557:-|nuORF	ENST00000523638.5_1_19:37019440-37019557:-|nuORF	ENST00000523638.5_1_19:37019440-37019557:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.92950439453125	2	484.294768	966.574983	1.5196	0.00073594	-0.15007	-7.2677E-05	1.3695	0.00066326	484.2944933372739	26.907	0.80608	26.566	26.186	26.992	-0.34035					39	17	3	0	0	0	0.20789	1	1548	1548		27.882	0	1	261950			20280	13202	13740	13750	23366	23366					0.09035815108427414
KGKAKGKQ	8	Unmodified	_KGKAKGKQ_					0	0	0			REV__nc|ENSG00000112041|O00294-2|TULP1	REV__nc|ENSG00000112041|O00294-2|TULP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.7722473144531	2	422.771794	843.529036	0.19225	8.1277E-05	0.73817	0.00031208	0.93042	0.00039335	422.77194654391445	20.391	0.44861	19.762	19.536	19.984	-0.62961					21	9	3	0	0	0	0.89962	1	652	652		38.806	1.647	1	146220	+		20281	17911	13741	13751	23367	23367					0.10101214716848972
KGKAMLLL	8	Unmodified	_KGKAMLLL_					0	0	0			REV__MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|19|1|anti-sense	REV__MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|19|1|anti-sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2676086425781	2	437.283149	872.551745	1.1168	0.00048835	-3.1307	-0.001369	-2.0139	-0.00088067	437.28378302869436	53.485	0.16448	53.507	53.453	53.617	0.022541					6	4	2	0	0	0	0.4196	1	4717	4717		13.775	0	1	24267	+		20282	29661	13742	13752	23368	23368					0.1103709779009705
KGKARLDSSA	10	Unmodified	_KGKARLDSSA_					0	0	0			REV__ENST00000367569.3_1_6:144416633-144416681:-|nuORF	REV__ENST00000367569.3_1_6:144416633-144416681:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7935791015625	2	516.793455	1031.57236	0.82179	0.0004247	-0.75095	-0.00038809	0.070838	3.6609E-05	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.8545	1	9117	9117		36.447	10.873	1	858640	+		20283	25572	13743	13753	23369	23369					0.057833597034687045
KGKFREGID	9	Unmodified	_KGKFREGID_					0	0	0		ENSG00000137265|ENST00000380956|IRF4;nc|ENSG00000137265|Q15306-2|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF	ENSG00000137265|ENST00000380956|IRF4	ENSG00000137265|ENST00000380956|IRF4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.8077392578125	2	525.290548	1048.56654	0.36636	0.00019244	-0.34652	-0.00018202	0.019834	1.0419E-05	525.2902266523242	18.32	0.44437	17.699	17.539	17.983	-0.62141					19	9	3	0	0	0	0.20789	1	390	390		74.255	19.479	1	195600			20284	4184	13744	13754	23370	23370					0.044202611917853574
KGKFREGID	9	Unmodified	_KGKFREGID_					0	0	0		ENSG00000137265|ENST00000380956|IRF4;nc|ENSG00000137265|Q15306-2|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF	ENSG00000137265|ENST00000380956|IRF4	ENSG00000137265|ENST00000380956|IRF4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	525.290548	1048.56654	0.11952	6.2784E-05	-7.3678	-0.0038702	-7.2482	-0.0038074	525.2870383876227	17.52	0.13685	17.441	17.373	17.51	-0.079054	-0.17023	-0.0067232	NaN	74.255	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14329			20285	4184	13744	13754							0.044202611917853574
KGKGLCADCY	10	Unmodified	_KGKGLCADCY_					0	0	0			REV__ENST00000505730.1_1_4:1101075-1107240:-|nuORF	REV__ENST00000505730.1_1_4:1101075-1107240:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.3037719726562	2	529.243895	1056.47324	0.59762	0.00031628	2.946	0.0015592	3.5436	0.0018755	529.2453421990402	57.603	0.75387	58.158	57.888	58.642	0.55512					28	18	2	0	0	0	0.37624	1	6084	6084		27.882	6.9353	1	577020	+		20286	22266	13745	13755	23371	23371					-0.05274122577293383
KGKGRVKHHM	10	Unmodified	_KGKGRVKHHM_					0	0	0		ENSG00000213171|ENST00000368820|LINGO4	ENSG00000213171|ENST00000368820|LINGO4	ENSG00000213171|ENST00000368820|LINGO4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3426513671875	2	589.340384	1176.66621	0.71716	0.00042265	4.0563	0.0023905	4.7734	0.0028132	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.8608	1	11018	11018		34.173	5.0025	1	2439600			20287	8580	13746	13756	23372	23372					0.0849480032475185
KGKGRVKHHM	10	Unmodified	_KGKGRVKHHM_					0	0	0		ENSG00000213171|ENST00000368820|LINGO4	ENSG00000213171|ENST00000368820|LINGO4	ENSG00000213171|ENST00000368820|LINGO4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3427124023438	2	589.340384	1176.66621	0.82336	0.00048524	3.5314	0.0020812	4.3548	0.0025665	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.86589	2	11444	11419;11444		29.15	3.6795	1	9460500			20288	8580	13746	13756	23373;23374	23374					0.0849480032475185
KGKHLLHII	9	Unmodified	_KGKHLLHII_					0	0	0			REV__nc|ENSG00000140859|Q9BVG8-4|KIFC3	REV__nc|ENSG00000140859|Q9BVG8-4|KIFC3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.841796875	2	529.845294	1057.67603	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.558	1	25.621	25.121	26.121	0.063122								0	0	0	0.33676	1	938	938		18.324	0.95945	1		+		20289	19647	13747	13757	23375	23375					0.14950311601796784
KGKIFIPK	8	Unmodified	_KGKIFIPK_					0	0	0		ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	ENSG00000138594|ENST00000308580|TMOD3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.79766845703125	2	465.810388	929.606223	-0.33204	-0.00015467	-3.9115	-0.001822	-4.2436	-0.0019767	465.8084261230603	19.289	0.30244	19.216	19.026	19.329	-0.073704					9	7	2	0	0	0	0.4196	1	404	404		13.775	0	1	17895			20290	4304	13748	13758	23376	23376					0.13860432933165612
KGKKKKET	8	Unmodified	_KGKKKKET_					0	0	0			REV__ENST00000446401.1_1_2:114588904-114600908:-|nuORF	REV__ENST00000446401.1_1_2:114588904-114600908:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.80499267578125	2	473.805834	945.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.349	1	18.72	18.22	19.22	-0.6296								0	0	0	0.29703	1	509	509		37.159	11.709	1		+		20291	26805	13749	13759	23377	23377					0.122140395768497
KGKKNIFESFV	11	Unmodified	_KGKKNIFESFV_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.8727416992188	2	648.869163	1295.72377	-0.0025716	-1.6686E-06	4.319	0.0028025	4.3164	0.0028008	648.8719439244529	99.494	2.1461	99.535	98.831	100.98	0.041107					134	49	3	0	0	0	0.60058	1	10596	10596		44.377	12.422	1	250130			20292	7862	13750	13760	23378	23378					0.08773921011288621
KGKKSKSK	8	Unmodified	_KGKKSKSK_					0	0	0			REV__ENSG00000153006|ENST00000513458|SREK1IP1	REV__ENSG00000153006|ENST00000513458|SREK1IP1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	445.6358947753906	2	445.792727	889.5709	-1.8887	-0.00084196	-3.3287	-0.0014839	-5.2174	-0.0023259	445.79129133038043	39.443	0.94989	39.443	39.065	40.015	0					35	22	2	0	0	0	0.4196	1	2543	2543		6.7355	0	1	44423	+		20293	20327	13751	13761	23379	23379					0.12169770405375857
KGKNLKKPA	9	Unmodified	_KGKNLKKPA_					0	0	0		nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-4|SVIL;nc|ENSG00000197321|O95425-3|SVIL;ENSG00000197321|ENST00000355867|SVIL	nc|ENSG00000197321|O95425-2|SVIL	nc|ENSG00000197321|O95425-2|SVIL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.3175354003906	2	492.321651	982.62875	0.073827	3.6346E-05	-2.9424	-0.0014486	-2.8686	-0.0014123	492.3201482516131	15.974	0.38935	16.034	15.819	16.208	0.059269					23	15	2	0	0	0	0.7932	1	91	91		24.203	3.2558	1	126450			20294	8152	13752	13762	23380	23380					0.13674032330789032
KGKTIFRF	8	Unmodified	_KGKTIFRF_					0	0	0		nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000183873|Q14524-5|SCN5A;ENST00000476683.1_1_3:38671674-38674684:-|nuORF;ENST00000491944.1_1_3:38656036-38674834:-|nuORF;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A	nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000183873|Q14524-3|SCN5A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.80322265625	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.8347	1	4394	4394		23.042	5.6775	1	2118300			20295	313;7570	13753	13763	23381	23381					0.09366360785031702
KGKTIFRF	8	Unmodified	_KGKTIFRF_					0	0	0		nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000183873|Q14524-5|SCN5A;ENST00000476683.1_1_3:38671674-38674684:-|nuORF;ENST00000491944.1_1_3:38656036-38674834:-|nuORF;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A	nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000183873|Q14524-3|SCN5A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.8033142089844	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.89494	1	4164	4164		37.159	10.363	1	2538600			20296	313;7570	13753	13763	23382	23382					0.09366360785031702
KGKTRGGLAS	10	Unmodified	_KGKTRGGLAS_					0	0	0			REV__nc|ENSG00000147394|O15231-4|ZNF185	REV__nc|ENSG00000147394|O15231-4|ZNF185	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7904968261719	2	487.790715	973.566878	-0.70733	-0.00034503	0.46293	0.00022581	-0.2444	-0.00011922	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.86587	1	8310	8310		29.17	0.020503	1	2348200	+		20297	20068	13754	13764	23383	23383					0.07903680911658739
KGKTRGGLAS	10	Unmodified	_KGKTRGGLAS_					0	0	0			REV__nc|ENSG00000147394|O15231-4|ZNF185	REV__nc|ENSG00000147394|O15231-4|ZNF185	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7908020019531	2	487.790715	973.566878	-0.24073	-0.00011743	0.15721	7.6687E-05	-0.083519	-4.074E-05	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.85981	1	9848	9848		35.152	3.1972	1	1981400	+		20298	20068	13754	13764	23384	23384					0.07903680911658739
KGLALSHSP	9	Unmodified	_KGLALSHSP_					0	0	0		nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.1875305175781	2	455.261259	908.507966	-0.30389	-0.00013835	0.26353	0.00011997	-0.040357	-1.8373E-05	455.2611662260184	28.087	0.64591	28.047	27.793	28.439	-0.039907					24	13	3	0	0	0	0.20789	1	1366	1366		30.504	5.9844	1	43489			20299	687	13755	13765	23385	23385					0.050052046173163944
KGLGKVSH	8	Unmodified	_KGLGKVSH_					0	0	0			REV__ENST00000468608.1_1_1:226549491-226550854:-|nuORF	REV__ENST00000468608.1_1_1:226549491-226550854:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2664489746094	2	413.250695	824.486836	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.622	1	16.598	16.098	17.098	-0.024035								0	0	0	0.29264	1	166	166		29.15	6.1071	1		+		20300	19842	13756	13766	23386	23386					0.06757239308467433
KGLHLYGTQG	10	Unmodified	_KGLHLYGTQG_					0	0	0		ENST00000494815.1_1_11:864058-865677:+|nuORF;ENSG00000214063|ENST00000397397|TSPAN4;ENST00000468468.5_1_11:864058-866627:+|nuORF	ENST00000494815.1_1_11:864058-865677:+|nuORF	ENST00000494815.1_1_11:864058-865677:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.2767333984375	2	537.290548	1072.56654	1.115	0.00059907	2.6992	0.0014502	3.8142	0.0020493	537.2914855646583	24.142	0.77736	23.629	23.322	24.099	-0.51365					34	17	3	0	0	0	0.37624	1	1174	1174		69.628	40.458	1	155580			20301	8615	13757	13767	23387	23387					0.033162611917987306
KGLIDYYLM	9	Unmodified	_KGLIDYYLM_					0	0	0		ENSG00000101751|ENST00000579534|POLI	ENSG00000101751|ENST00000579534|POLI	ENSG00000101751|ENST00000579534|POLI	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.7950439453125	2	558.293911	1114.57327	-0.68083	-0.00038011	0.80388	0.0004488	0.12304	6.8694E-05	558.2944299731103	30.533	0.3816	30.558	30.337	30.718	0.025013					15	10	2	0	0	0	0.7932	1	1595	1595		20.947	0	1	30779			20302	1958	13758	13768	23388	23388					0.020564380281484773
KGLIKKKLKNM	11	Unmodified	_KGLIKKKLKNM_					0	0	0		ENSG00000165490|ENST00000533655|DDIAS	ENSG00000165490|ENST00000533655|DDIAS	ENSG00000165490|ENST00000533655|DDIAS	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.2881164550781	3	434.288092	1299.84245	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.561	1	53.609	53.109	54.109	0.047802								0	0	0	0.56276	1	4380	4380		14.086	1.1285	1				20303	6086	13759	13769	23389	23389					0.20451996715314635
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.3008117675781	2	494.300916	986.587279	-0.82421	-0.00040741	0.56645	0.00028	-0.25775	-0.00012741	494.3011394049625	97.613	4.008	97.613	96.986	100.99	0					359	95	6	0	0	0	0.74721	4	9991	9906;9957;9991;10032		37.159	7.3764	1	29815000	+		20304	25914	13760	13770	23390;23391;23392;23393	23392					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.30096435546875	2	494.300916	986.587279	-0.0748	-3.6974E-05	-0.3174	-0.00015689	-0.3922	-0.00019387	494.30075143902303	97.483	4.0876	97.54	96.775	100.86	0.056839					393	94	6	0	0	0	0.64922	6	10517	10222;10402;10451;10517;10541;10571		44.117	11.304	1	54076000	+		20305	25914	13760	13770	23394;23395;23396;23397;23398;23399	23397					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3009033203125	2	494.300916	986.587279	2.3073	0.0011405	-2.72	-0.0013445	-0.41277	-0.00020403	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.77244	2	10618	10546;10618		32.812	2.3088	1	53958000	+		20306	25914	13760	13770	23400;23401	23401					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3008117675781	2	494.300916	986.587279	-0.67103	-0.00033169	0.2629	0.00012995	-0.40813	-0.00020174	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.64922	4	10396	10396;10481;10505;10541		44.117	11.304	1	54981000	+		20307	25914	13760	13770	23402;23403;23404;23405	23402					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.30047607421875	2	494.300916	986.587279	-0.67495	-0.00033363	0.57188	0.00028268	-0.10307	-5.0948E-05	494.3010949420444	100.88	1.208	100.92	100.47	101.68	0.046356					71	28	3	0	0	0	0.78536	1	10856	10856		29.15	1.2673	1	545700	+		20308	25914	13760	13770	23406	23406					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30072021484375	2	494.300916	986.587279	-0.58723	-0.00029027	0.13313	6.5808E-05	-0.4541	-0.00022446	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.67345	6	10330	9970;9982;10169;10181;10193;10330		42.396	10.275	1	65263000	+		20309	25914	13760	13770	23407;23408;23409;23410;23411;23412	23412					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3000793457031	2	494.300916	986.587279	-0.58165	-0.00028751	0.50872	0.00025146	-0.072933	-3.6051E-05	494.30110008283356	100.79	1.5343	100.99	100.36	101.9	0.2058					82	36	3	0	0	0	0.76255	1	10595	10595		35.618	5.1146	1	820880	+		20310	25914	13760	13770	23413	23413					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.2997741699219	2	494.300916	986.587279	-0.58187	-0.00028762	0.6538	0.00032317	0.071931	3.5555E-05	494.3012065924571	103.17	0.98251	103.35	103.08	104.07	0.18298					55	24	3	0	0	0	0.76255	1	10912	10912		35.618	2.1027	1	1020600	+		20311	25914	13760	13770	23414	23414					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3008117675781	2	494.300916	986.587279	0.76681	0.00037903	-1.1549	-0.00057088	-0.38812	-0.00019185	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.64922	4	10354	10190;10214;10297;10354		44.117	9.9443	1	52135000	+		20312	25914	13760	13770	23415;23416;23417;23418	23418					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.30035400390625	2	494.300916	986.587279	0.79689	0.0003939	-0.92973	-0.00045957	-0.13284	-6.5664E-05	494.3003729915352	100.82	1.5238	100.97	100.42	101.94	0.14352					78	36	3	0	0	0	0.76764	1	10545	10545		34.173	1.3601	1	706980	+		20313	25914	13760	13770	23419	23419					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3005065917969	2	494.300916	986.587279	0.79727	0.00039409	-0.70769	-0.00034981	0.089574	4.4277E-05	494.30060653822994	103.34	1.0251	103.46	103.09	104.12	0.12622					57	25	3	0	0	0	0.69624	1	10915	10915		40.778	2.9666	1	689170	+		20314	25914	13760	13770	23420	23420					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.30072021484375	2	494.300916	986.587279	-1.6335	-0.00080746	1.1761	0.00058136	-0.4574	-0.0002261	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.64922	7	10130	10106;10130;10190;10214;10226;10240;10275		44.117	11.099	1	46933000	+		20315	25914	13760	13770	23421;23422;23423;23424;23425;23426;23427	23422					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3009033203125	2	494.300916	986.587279	-1.6335	-0.00080746	1.3844	0.00068432	-0.24911	-0.00012313	494.30150238478427	100.99	1.3749	101.14	100.57	101.95	0.15505					78	33	3	0	0	0	0.76764	2	10504	10437;10504		34.173	5.0025	1	773220	+		20316	25914	13760	13770	23428;23429	23429					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.301025390625	2	494.300916	986.587279	1.003	0.00049577	-1.194	-0.00059017	-0.19099	-9.4404E-05	494.3002402240543	96.954	3.9557	97.359	96.674	100.63	0.40498					299	97	6	0	0	0	0.67345	3	11596	11596;11656;11668		42.396	10.441	1	25258000	+		20317	25914	13760	13770	23430;23431;23432	23430					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.30059814453125	2	494.300916	986.587279	0.88078	0.00043537	-1.0905	-0.00053901	-0.20967	-0.00010364	494.3002880194073	97.072	3.8769	97.462	96.82	100.7	0.39066					309	95	6	0	0	0	0.71772	1	11754	11754		39.253	0	1	27149000	+		20318	25914	13760	13770	23433	23433					0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	494.300916	986.587279	-0.074435	-3.6793E-05	0.21415	0.00010585	0.13972	6.9061E-05	494.300946163151	103.62	1.1084	103.61	103.18	104.29	-0.0035706	0.090086	0.00023304	NaN	40.778	55	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	470590	+		20319	25914	13760	13770							0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	494.300916	986.587279	2.8509	0.0014092	-2.8404	-0.001404	0.010479	5.18E-06	494.299410360791	103.53	1.1075	103.49	103.08	104.18	-0.043755	-0.03891	-0.0027867	NaN	40.778	60	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	602640	+		20320	25914	13760	13770							0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	494.300916	986.587279	-0.67308	-0.0003327	0.69742	0.00034473	0.024336	1.2029E-05	494.301277334812	103.42	1.1043	103.46	102.98	104.09	0.041481	-0.061162	0.0007108	NaN	40.778	59	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	522720	+		20321	25914	13760	13770							0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	494.300916	986.587279	-0.58187	-0.00028762	0.6538	0.00032317	0.071931	3.5555E-05	494.3012065924571	103.17	0.98251	103.35	103.08	104.07	0.18298	-0.16966	0.00066768	NaN	40.778	55	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1020600	+		20322	25914	13760	13770							0.09344851571461277
KGLIKRDAS	9	Unmodified	_KGLIKRDAS_					0	0	0			REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	REV__ENST00000379278.3_1_6:13470784-13486293:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	494.300916	986.587279	-1.6335	-0.00080746	1.7841	0.00088189	0.15057	7.4428E-05	494.30173726769704	103.39	1.0146	103.5	103.11	104.12	0.11494	-0.020585	0.0017851	NaN	40.778	47	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	659110	+		20323	25914	13760	13770							0.09344851571461277
KGLILDLKYG	10	Unmodified	_KGLILDLKYG_					0	0	0		nc|ENSG00000021645|Q9Y4C0-4|NRXN3;ENSG00000021645|ENST00000335750|NRXN3;nc|ENSG00000021645|Q9Y4C0|NRXN3	nc|ENSG00000021645|Q9Y4C0-4|NRXN3	nc|ENSG00000021645|Q9Y4C0-4|NRXN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3403930664062	2	560.342249	1118.66995	-0.60038	-0.00033642	-2.9864	-0.0016734	-3.5868	-0.0020098	560.3405348095038	89.752	2.8802	89.752	87.726	90.606	0					163	66	4	0	0	0	0.86272	1	8728	8728		24.519	2.5593	1	504890			20324	848	13761	13771	23434	23434					0.11535748579581195
KGLISRAAQ	9	Unmodified	_KGLISRAAQ_					0	0	0			REV__nc|ENSG00000292373|Q01113-3|IL9R	REV__nc|ENSG00000292373|Q01113-3|IL9R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28814697265625	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.7932	1	12492	12492		19.997	2.6318	1	3080300	+		20325	30306	13762	13772	23435	23435					0.08748582399982752
KGLKVTWL	8	Unmodified	_KGLKVTWL_					0	0	0			REV__ENST00000375664.8_2_10:28908559-28908709:+|nuORF	REV__ENST00000375664.8_2_10:28908559-28908709:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.80157470703125	2	472.80002	943.585488	-0.1068	-5.0496E-05	-1.2647	-0.00059797	-1.3715	-0.00064846	472.7993034037368	108.92	0.78944	108.87	108.33	109.12	-0.049332					47	32	2	0	0	0	0.87479	1	11875	11875		30.504	0	1	891680	+		20326	25817	13763	13773	23436	23436					0.1114384255350842
KGLLGMCVG	9	Unmodified	_KGLLGMCVG_					0	0	0		nc|ENSG00000122642|O95302-3|FKBP9;ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;ENST00000489038.5_1_7:33016023-33032371:+|nuORF	nc|ENSG00000122642|O95302-3|FKBP9	nc|ENSG00000122642|O95302-3|FKBP9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.234619140625	2	439.235341	876.45613	1.5554	0.00068317	-0.78734	-0.00034583	0.76803	0.00033734	439.23488920789083	27.555	0.97632	27.3	27.034	28.01	-0.25465					49	22	4	0	0	0	0.77546	2	1598	1598;1608		31.955	4.0726	1	767500			20327	3236	13764	13774	23437;23438	23437					0.012960016075680869
KGLRSATPDA	10	Unmodified	_KGLRSATPDA_					0	0	0		nc|ENSG00000188508|P60985-2|KRTDAP;ENSG00000188508|ENST00000338897|KRTDAP	nc|ENSG00000188508|P60985-2|KRTDAP	nc|ENSG00000188508|P60985-2|KRTDAP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.2770080566406	2	508.28018	1014.54581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.521	1	40.526	40.026	41.026	0.0048218								0	0	0	0.45132	1	2576	2576		36.447	0.82846	1				20328	7933	13765	13775	23439	23439					0.03911670812124157
KGLSKVWQE	9	Unmodified	_KGLSKVWQE_					0	0	0		ENSG00000204740|ENST00000454679|MALRD1	ENSG00000204740|ENST00000454679|MALRD1	ENSG00000204740|ENST00000454679|MALRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.80029296875	2	537.800749	1073.58694	-0.31613	-0.00017001	0.29815	0.00016035	-0.017978	-9.6684E-06	537.8006138106188	19.034	0.52099	18.405	18.19	18.711	-0.6296					20	11	3	0	0	0	0.58668	1	468	468		47.657	0	1	132070			20329	8485	13766	13776	23440	23440					0.0530943185160595
KGLSVFLNR	9	Unmodified	_KGLSVFLNR_					0	0	0		ENSG00000136235|ENST00000258733|GPNMB;nc|ENSG00000136235|Q14956|GPNMB;ENST00000478451.1_1_7:23312974-23313840:+|nuORF;ENST00000463011.5_1_7:23312740-23313840:+|nuORF	ENSG00000136235|ENST00000258733|GPNMB	ENSG00000136235|ENST00000258733|GPNMB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	517.3101806640625	2	517.311284	1032.60801	0.18184	9.4069E-05	-0.54049	-0.0002796	-0.35865	-0.00018553	517.3108486685642	47.394	0.7206	47.385	46.993	47.714	-0.0093269					49	21	3	0	0	0	4.5757E-05	4	3853	3845;3853;3861;3877		150.36	81.575	1	935500			20330	4097	13767	13777	23441;23442;23443;23444	23442					0.09301441951151901
KGLSVFLNR	9	Unmodified	_KGLSVFLNR_					0	0	0		ENSG00000136235|ENST00000258733|GPNMB;nc|ENSG00000136235|Q14956|GPNMB;ENST00000478451.1_1_7:23312974-23313840:+|nuORF;ENST00000463011.5_1_7:23312740-23313840:+|nuORF	ENSG00000136235|ENST00000258733|GPNMB	ENSG00000136235|ENST00000258733|GPNMB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	517.3110961914062	2	517.311284	1032.60801	-0.44826	-0.00023189	0.10172	5.262E-05	-0.34654	-0.00017927	517.3111677851746	47.289	0.66925	47.262	46.94	47.609	-0.026733					51	20	4	0	0	0	2.5939E-13	4	3943	3927;3934;3943;3953		167.23	99.735	1	1117900			20331	4097	13767	13777	23445;23446;23447;23448	23447					0.09301441951151901
KGLSVFLNR	9	Unmodified	_KGLSVFLNR_					0	0	0		ENSG00000136235|ENST00000258733|GPNMB;nc|ENSG00000136235|Q14956|GPNMB;ENST00000478451.1_1_7:23312974-23313840:+|nuORF;ENST00000463011.5_1_7:23312740-23313840:+|nuORF	ENSG00000136235|ENST00000258733|GPNMB	ENSG00000136235|ENST00000258733|GPNMB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	517.310546875	2	517.311284	1032.60801	0.13677	7.0752E-05	-0.33128	-0.00017137	-0.19451	-0.00010062	517.3109613500842	47.41	0.71363	47.407	47.02	47.734	-0.002449					52	22	3	0	0	0	0.0010652	3	3878	3878;3889;3899		145.16	73.86	1	1235200			20332	4097	13767	13777	23449;23450;23451	23449					0.09301441951151901
KGLTRGKTSA	10	Unmodified	_KGLTRGKTSA_					0	0	0			REV__ENST00000401053.8_1_19:58579401-58579854:+|nuORF	REV__ENST00000401053.8_1_19:58579401-58579854:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.80352783203125	2	509.803823	1017.59309	-0.35462	-0.00018079	0.94986	0.00048424	0.59524	0.00030346	509.80413554119815	99.2	1.1177	99.422	99.047	100.17	0.22262					55	26	3	0	0	0	0.85834	1	10334	10334		22.58	0.89391	1	290070	+		20333	26255	13768	13778	23452	23452					0.08499950083137264
KGLVSSSLL	9	Unmodified	_KGLVSSSLL_					0	0	0			REV__nc|ENSG00000273345|Q8IVW4-2|CDKL3	REV__nc|ENSG00000273345|Q8IVW4-2|CDKL3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.2774963378906	2	452.279118	902.543683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.751	1	54.725	54.225	55.225	-0.025955								0	0	0	0.30416	1	4953	4953		29.15	2.4566	1		+		20334	16114	13769	13779	23453	23453					0.08851242074331367
KGMARPLPE	9	Unmodified	_KGMARPLPE_					0	0	0		ENST00000360862.9_2_16:3534964-3535998:+|nuORF;ENST00000407558.8_1_16:3534861-3535998:+|nuORF	ENST00000360862.9_2_16:3534964-3535998:+|nuORF	ENST00000360862.9_2_16:3534964-3535998:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7492370605469	2	499.776219	997.537886	0.024445	1.2217E-05	3.3236	0.0016611	3.348	0.0016733	499.7784063611813	75.323	0.35747	75.887	75.742	76.1	0.56458					12	8	2	0	0	0	0.20789	1	8551	8551		21.96	4.4919	1	95988			20335	10458	13770	13780	23454	23454					0.039018202910028776
KGMQEFLLRAS	11	Unmodified	_KGMQEFLLRAS_					0	0	0		ENSG00000189233|ENST00000413272|NUGGC	ENSG00000189233|ENST00000413272|NUGGC	ENSG00000189233|ENST00000413272|NUGGC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3468017578125	2	640.344997	1278.67544	1.5878	0.0010167	0.99424	0.00063665	2.582	0.0016534	640.3455184855359	102.86	0.59948	103.05	102.76	103.36	0.18297					44	14	4	0	0	0	0.57736	1	10869	10869		46.457	2.0796	1	4444300			20336	7998	13771	13781	23455	23455					0.047251040997707605
KGMQEFLLRAS	11	Unmodified	_KGMQEFLLRAS_					0	0	0		ENSG00000189233|ENST00000413272|NUGGC	ENSG00000189233|ENST00000413272|NUGGC	ENSG00000189233|ENST00000413272|NUGGC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3473510742188	2	640.344997	1278.67544	1.7548	0.0011237	0.72808	0.00046622	2.4828	0.0015899	640.3452591668301	102.79	0.81303	103.02	102.65	103.47	0.22556					88	25	4	0	0	0	0.51007	2	12501	12466;12501		51.193	6.5329	1	14025000			20337	7998	13771	13781	23456;23457	23457					0.047251040997707605
KGNKIKVTT	9	Unmodified	_KGNKIKVTT_					0	0	0			REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.8134765625	2	494.811116	987.60768	-0.073812	-3.6523E-05	3.2264	0.0015965	3.1526	0.0015599	494.8125328579167	110.35	1.0814	110.3	110.18	111.26	-0.055077					57	37	2	0	0	0	0.7932	1	12055	12055		20.947	0.4651	1	189850	+		20338	23096	13772	13782	23458	23458					0.11338022231268496
KGNQIKNH	8	Unmodified	_KGNQIKNH_					0	0	0			REV__ENSG00000181072|ENST00000680005|CHRM2	REV__ENSG00000181072|ENST00000680005|CHRM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.76043701171875	2	469.761958	937.509363	-1.0651	-0.00050035	-0.060913	-2.8615E-05	-1.126	-0.00052896	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.884	1	1919	1919		33.516	1.5607	1	219920	+		20339	22439	13773	13783	23459	23459					0.03810838706067443
KGNSGTIDAH	10	Unmodified	_KGNSGTIDAH_					0	0	0			REV__ENST00000493891.5_1_1:60103921-60223658:+|nuORF	REV__ENST00000493891.5_1_1:60103921-60223658:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.2464599609375	2	500.246338	998.478122	-0.69161	-0.00034597	0.58038	0.00029033	-0.11123	-5.5641E-05	500.2465024862851	28.806	0.53036	28.786	28.523	29.053	-0.019407					28	16	2	0	0	0	0.86348	1	1412	1412		31.53	4.7337	1	68410	+		20340	27705	13774	13784	23460	23460					-0.021177791186801187
KGNSPLLQK	9	Unmodified	_KGNSPLLQK_					0	0	0		nc|ENSG00000100325|Q9H1I8-2|ASCC2;ENST00000458594.5_1_22:30197094-30223519:-|nuORF;nc|ENSG00000100325|Q9H1I8-3|ASCC2;ENSG00000100325|ENST00000307790|ASCC2;ENST00000465667.6_1_22:30218318-30228314:-|nuORF	nc|ENSG00000100325|Q9H1I8-2|ASCC2	nc|ENSG00000100325|Q9H1I8-2|ASCC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.79547119140625	2	492.795466	983.57638	0.25206	0.00012421	-0.35471	-0.0001748	-0.10265	-5.0586E-05	492.79512939166796	22.846	0.79203	22.427	22.016	22.808	-0.41879					34	18	3	0	0	0	0.23176	1	968	968		70.816	12.034	1	310770			20341	1824	13775	13785	23461	23461					0.08393449197171776
KGPEARAGGW	10	Unmodified	_KGPEARAGGW_					0	0	0			REV__nc|ENSG00000130768|Q92485-2|SMPDL3B	REV__nc|ENSG00000130768|Q92485-2|SMPDL3B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.7687377929688	2	514.76724	1027.51993	0.79067	0.00040701	2.3911	0.0012309	3.1818	0.0016379	514.7683214537043	16.218	0.47723	15.731	15.436	15.913	-0.48718					13	10	2	0	0	0	0.86471	1	102	102		30.318	4.7437	1	129270	+		20342	18905	13776	13786	23462	23462					0.0072682136051298585
KGPGKPHL	8	Unmodified	_KGPGKPHL_					0	0	0		ENST00000368787.3_1_1:152552054-152552168:-|nuORF	ENST00000368787.3_1_1:152552054-152552168:-|nuORF	ENST00000368787.3_1_1:152552054-152552168:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2523498535156	2	417.253237	832.491922	1.1468	0.00047852	-1.1009	-0.00045934	0.04598	1.9185E-05	417.25267140045923	34.909	1.7954	35.119	34.728	36.524	0.21003					84	45	2	0	0	0	0.81548	1	2656	2656		20.482	7.5226	1	741890			20343	10602	13777	13787	23463	23463					0.06897543171089637
KGPGKPHL	8	Unmodified	_KGPGKPHL_					0	0	0		ENST00000368787.3_1_1:152552054-152552168:-|nuORF	ENST00000368787.3_1_1:152552054-152552168:-|nuORF	ENST00000368787.3_1_1:152552054-152552168:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	417.253237	832.491922	-0.018611	-7.7657E-06	0.75692	0.00031583	0.73831	0.00030806	417.25346824265836	35.19	0.08812	35.135	35.103	35.191	-0.055149	-0.010466	0.0015983	NaN	20.482	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27261			20344	10602	13777	13787							0.06897543171089637
KGPISKML	8	Unmodified	_KGPISKML_					0	0	0			REV__ENST00000260731.4_1_10:94366146-94368792:+|nuORF	REV__ENST00000260731.4_1_10:94366146-94368792:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2652282714844	2	437.264956	872.515359	-1.6247	-0.00071044	3.2874	0.0014375	1.6627	0.00072704	437.26636390033156	24.021	1.8701	24.079	23.417	25.287	0.058165					191	86	4	0	0	0	0.86677	1	777	777		27.882	2.4321	1	2248600	+		20345	24372	13778	13788	23464	23464					0.0740022089340755
KGPKGLCP	8	Unmodified	_KGPKGLCP_					0	0	0			REV__nc|nan|Q9NQ32-2|C11orf16	REV__nc|nan|Q9NQ32-2|C11orf16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.22845458984375	2	400.228374	798.442194	1.122	0.00044908	-2.7095	-0.0010844	-1.5874	-0.00063533	400.22744040827075	52.487	1.5647	52.911	52.149	53.713	0.42348					74	37	3	0	0	0	0.87922	1	5242	5242		31.955	3.7006	1	9430900	+		20346	30331	13779	13789	23465	23465					0.034910921707592024
KGPKGLCP	8	Unmodified	_KGPKGLCP_					0	0	0			REV__nc|nan|Q9NQ32-2|C11orf16	REV__nc|nan|Q9NQ32-2|C11orf16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2279968261719	2	400.228374	798.442194	-0.058285	-2.3327E-05	-1.3351	-0.00053435	-1.3934	-0.00055767	400.2280059844884	52.237	1.9334	52.905	52.23	54.164	0.66729					76	46	3	0	0	0	0.7961	1	5268	5268		17.365	0.66	1	9506900	+		20347	30331	13779	13789	23466	23466					0.034910921707592024
KGPLRRAQQI	10	Unmodified	_KGPLRRAQQI_					0	0	0			REV__chr5:69625900-70219918|34|41.38|0.0|21.98|-|1|TE_info:HAL1,HAL1_dup7374,L1,LINE,acceptor,-,69625677,69625900|None,GUSBP14|5	REV__chr5:69625900-70219918|34|41.38|0.0|21.98|-|1|TE_info:HAL1,HAL1_dup7374,L1,LINE,acceptor,-,69625677,69625900|None,GUSBP14|5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.8585815429688	2	583.859464	1165.70437	2.8156	0.0016439	-3.8035	-0.0022207	-0.98785	-0.00057677	583.8570467437777	98.7	2.5935	98.645	98.156	100.75	-0.054817					154	59	5	0	0	0	0.8608	2	10643	10643;10655		34.173	3.6629	1	1920100	+		20348	15861	13780	13790	23467;23468	23467					0.1281500951106409
KGPLRRAQQI	10	Unmodified	_KGPLRRAQQI_					0	0	0			REV__chr5:69625900-70219918|34|41.38|0.0|21.98|-|1|TE_info:HAL1,HAL1_dup7374,L1,LINE,acceptor,-,69625677,69625900|None,GUSBP14|5	REV__chr5:69625900-70219918|34|41.38|0.0|21.98|-|1|TE_info:HAL1,HAL1_dup7374,L1,LINE,acceptor,-,69625677,69625900|None,GUSBP14|5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	583.8582763671875	2	583.859464	1165.70437	0.8653	0.00050521	-1.7368	-0.0010141	-0.87153	-0.00050885	583.8582639221804	98.476	1.8471	98.633	98.188	100.03	0.15659					108	42	5	0	0	0	0.6116	1	10227	10227		49.442	10.189	1	894230	+		20349	15861	13780	13790	23469	23469					0.1281500951106409
KGPLVTHSNT	10	Unmodified	_KGPLVTHSNT_					0	0	0			REV__ENST00000399788.6_1_12:498336-498612:-|nuORF	REV__ENST00000399788.6_1_12:498336-498612:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.7548828125	2	527.288005	1052.56146	1.2434	0.00065564	-1.5123	-0.0007974	-0.26885	-0.00014176	527.2870399112605	20.282	0.41263	19.823	19.641	20.053	-0.4591					14	8	2	0	0	0	0.37624	1	644	644		20.837	0	1	42288	+		20350	26238	13781	13791	23470	23470					0.03727957329192577
KGPMAAITIS	10	Unmodified	_KGPMAAITIS_					0	0	0			REV__ENST00000341376.10_1_6:41065228-41065375:+|nuORF	REV__ENST00000341376.10_1_6:41065228-41065375:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7805480957031	2	494.778428	987.542302	-0.074951	-3.7084E-05	4.0919	0.0020246	4.017	0.0019875	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.80179	1	8796	8796		39.253	1.4413	1	651380	+		20351	25260	13782	13792	23471	23471					0.048032847138983925
KGPPIIGQEVL	11	Unmodified	_KGPPIIGQEVL_					0	0	0			REV__ENSG00000132467|ENST00000254803|UTP3	REV__ENSG00000132467|ENST00000254803|UTP3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8430786132812	2	575.845156	1149.67576	-0.46596	-0.00026832	-3.1419	-0.0018092	-3.6078	-0.0020776	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.69248	2	9062	9038;9062		32.751	3.601	1	3411000	+		20352	19006	13783	13793	23472;23473	23473					0.10690847091291289
KGPQIFNAPSP	11	Unmodified	_KGPQIFNAPSP_					0	0	0			REV__nc|ENSG00000133475|P36268-2|GGT2P	REV__nc|ENSG00000133475|P36268-2|GGT2P	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3101806640625	2	578.31148	1154.60841	-0.30541	-0.00017662	-1.2607	-0.00072908	-1.5661	-0.0009057	578.3105993918314	110.37	1.6265	110.37	110.02	111.65	0					155	51	5	0	0	0	0.72106	1	11502	11502		28.081	1.3886	1	2787700	+		20353	17128	13784	13794	23474	23474					0.037288168803115695
KGPQQQKAS	9	Unmodified	_KGPQQQKAS_					0	0	0		nc|ENSG00000033122|Q96NW7-2|LRRC7;chr1:69716218-69760191|13|29.0|0.65|5.48|+|ENST00000310961|LRRC7,LRRC7;nc|ENSG00000033122|Q96NW7|LRRC7;ENSG00000033122|ENST00000651989|LRRC7	nc|ENSG00000033122|Q96NW7-2|LRRC7	nc|ENSG00000033122|Q96NW7-2|LRRC7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.26702880859375	2	486.267073	970.519593	1.0382	0.00050483	-0.85752	-0.00041699	0.18065	8.7843E-05	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.6204	1	8951	8951		45.972	5.1941	1	1819100			20354	56	13785	13795	23475	23475					0.03315401640657001
KGPRKMSVIVP	11	Unmodified	_KGPRKMSVIVP_					0	0	0		nc|ENSG00000166402|P50607-2|TUB;ENSG00000166402|ENST00000299506|TUB	nc|ENSG00000166402|P50607-2|TUB	nc|ENSG00000166402|P50607-2|TUB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.8729858398438	2	606.368275	1210.722	-1.2685	-0.00076921	3.3418	0.0020264	2.0733	0.0012572	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.7342	1	9535	9535		25.574	1.0549	1	823240			20355	15071	13786	13796	23476	23476					0.12506588721726075
KGPRSGTP	8	Unmodified	_KGPRSGTP_					0	0	0			REV__chr17:49031973-49038168|46|99.87|0.35|8.18|+|2|IGF2BP1,IGF2BP1|1	REV__chr17:49031973-49038168|46|99.87|0.35|8.18|+|2|IGF2BP1,IGF2BP1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.2270202636719	2	400.224677	798.434801	-0.40514	-0.00016215	2.2548	0.00090243	1.8497	0.00074029	400.2255865138528	16.87	0.29667	16.791	16.595	16.892	-0.079056					13	10	2	0	0	0	0.8347	1	166	166		23.042	4.7181	1	34422	+		20356	15657	13787	13797	23477	23477					0.027520758947048307
KGPSHSGNPSH	11	Unmodified	_KGPSHSGNPSH_					0	0	0		nc|ENSG00000120685|Q86XN7-2|PROSER1;ENSG00000120685|ENST00000352251|PROSER1	nc|ENSG00000120685|Q86XN7-2|PROSER1	nc|ENSG00000120685|Q86XN7-2|PROSER1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.2679443359375	2	552.762686	1103.51082	0.24067	0.00013304	-0.3152	-0.00017423	-0.074523	-4.1193E-05	552.7625291566416	18.359	0.38635	18.283	18.148	18.534	-0.07671					18	9	3	0	0	0	0.7434	1	291	291		23.523	0.48021	1	75869			20357	3142	13788	13798	23478	23478					-0.03679571995803599
KGPSLRTL	8	Unmodified	_KGPSLRTL_					0	0	0		nc|ENSG00000100241|O95248|SBF1;ENSG00000100241|ENST00000380817|SBF1;nc|ENSG00000100241|O95248-4|SBF1;ENST00000444527.2_1_8:56364433-56364982:-|nuORF	nc|ENSG00000100241|O95248|SBF1	nc|ENSG00000100241|O95248|SBF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.2725830078125	2	436.271627	870.528701	5.9552	0.0025981	-2.295	-0.0010012	3.6602	0.0015968	436.2705587646323	110.41	0.7871	110.48	110.17	110.96	0.067993					52	30	2	0	0	0	0.89043	1	13397	13397		35.618	7.736	1	551400			20358	1812	13789	13799	23479	23479					0.0882579499698295
KGPSLRTL	8	Unmodified	_KGPSLRTL_					0	0	0		nc|ENSG00000100241|O95248|SBF1;ENSG00000100241|ENST00000380817|SBF1;nc|ENSG00000100241|O95248-4|SBF1;ENST00000444527.2_1_8:56364433-56364982:-|nuORF	nc|ENSG00000100241|O95248|SBF1	nc|ENSG00000100241|O95248|SBF1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	436.271627	870.528701	1.8831	0.00082154	1.7764	0.00077497	3.6594	0.0015965	436.27230023201287	110.43	0.78737	110.49	110.22	111.01	0.054062	0.0031537	0.0017082	NaN	35.618	54	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	459690			20359	1812	13789	13799							0.0882579499698295
KGPSPPGAKRR	11	Unmodified	_KGPSPPGAKRR_					0	0	0		nc|ENSG00000124535|Q96S55-2|WRNIP1;ENSG00000124535|ENST00000380773|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8435668945312	2	575.843813	1149.67307	-0.46596	-0.00026832	-0.81024	-0.00046657	-1.2762	-0.00073489	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.72106	1	9303	9303		28.081	0.19925	1	3411000			20360	3339	13790	13800	23480	23480					0.10422436476960684
KGPSPPGAKRR	11	Unmodified	_KGPSPPGAKRR_					0	0	0		nc|ENSG00000124535|Q96S55-2|WRNIP1;ENSG00000124535|ENST00000380773|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8428955078125	2	575.843813	1149.67307	1.6833	0.00096931	-3.0775	-0.0017722	-1.3942	-0.00080286	575.8419126202111	90.702	2.7581	90.632	88.716	91.474	-0.069977					216	65	4	0	0	0	0.68532	1	9510	9510		33.922	3.6039	1	1939000			20361	3339	13790	13800	23481	23481					0.10422436476960684
KGPSPPGAKRR	11	Unmodified	_KGPSPPGAKRR_					0	0	0		nc|ENSG00000124535|Q96S55-2|WRNIP1;ENSG00000124535|ENST00000380773|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8428344726562	2	575.843813	1149.67307	1.9391	0.0011166	-3.5988	-0.0020723	-1.6596	-0.00095569	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.72106	2	9712	9678;9712		28.081	3.5623	1	5986700			20362	3339	13790	13800	23482;23483	23483					0.10422436476960684
KGPSPPGAKRR	11	Unmodified	_KGPSPPGAKRR_					0	0	0		nc|ENSG00000124535|Q96S55-2|WRNIP1;ENSG00000124535|ENST00000380773|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8431396484375	2	575.843813	1149.67307	0.91496	0.00052687	-2.3716	-0.0013657	-1.4567	-0.00083881	575.8423131361362	90.432	2.8004	90.479	88.667	91.467	0.046448					215	66	4	0	0	0	0.62614	1	9391	9391		41.427	9.8968	1	2025300			20363	3339	13790	13800	23484	23484					0.10422436476960684
KGPSPPGAKRR	11	Unmodified	_KGPSPPGAKRR_					0	0	0		nc|ENSG00000124535|Q96S55-2|WRNIP1;ENSG00000124535|ENST00000380773|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8426513671875	2	575.843813	1149.67307	0.91732	0.00052823	-2.5477	-0.0014671	-1.6304	-0.00093886	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.68532	1	9774	9774		33.922	3.418	1	5468500			20364	3339	13790	13800	23485	23485					0.10422436476960684
KGPSPPGAKRR	11	Unmodified	_KGPSPPGAKRR_					0	0	0		nc|ENSG00000124535|Q96S55-2|WRNIP1;ENSG00000124535|ENST00000380773|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8428955078125	2	575.843813	1149.67307	0.61103	0.00035186	-2.2107	-0.001273	-1.5997	-0.00092115	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.7144	1	9228	9228		29.17	3.596	1	6623700			20365	3339	13790	13800	23486	23486					0.10422436476960684
KGPSPPGAKRR	11	Unmodified	_KGPSPPGAKRR_					0	0	0		nc|ENSG00000124535|Q96S55-2|WRNIP1;ENSG00000124535|ENST00000380773|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8427124023438	2	575.843813	1149.67307	0.80402	0.00046299	-2.4364	-0.001403	-1.6324	-0.00094001	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.68532	1	9254	9254		33.922	3.418	1	6947200			20366	3339	13790	13800	23487	23487					0.10422436476960684
KGPSPPGAKRR	11	Unmodified	_KGPSPPGAKRR_					0	0	0		nc|ENSG00000124535|Q96S55-2|WRNIP1;ENSG00000124535|ENST00000380773|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	nc|ENSG00000124535|Q96S55-2|WRNIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8424072265625	2	575.843813	1149.67307	-1.368	-0.00078773	-0.22538	-0.00012979	-1.5933	-0.00091752	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.68532	1	9371	9371		33.922	1.9668	1	6121300			20367	3339	13790	13800	23488	23488					0.10422436476960684
KGPSRHAAAKK	11	Unmodified	_KGPSRHAAAKK_					0	0	0			REV__ENST00000367463.4_1_6:149397103-149397247:+|nuORF	REV__ENST00000367463.4_1_6:149397103-149397247:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.8429565429688	2	575.843813	1149.67307	0.47616	0.00027419	-2.8595	-0.0016466	-2.3834	-0.0013724	575.8420203793453	90.225	2.3894	90.676	89.242	91.632	0.45058					94	60	2	0	0	0	0.68532	1	10748	10748		33.922	6.0394	1	1893600	+		20368	25563	13791	13801	23489	23489					0.10422436476960684
KGPTFFSK	8	Unmodified	_KGPTFFSK_					0	0	0			REV__ENSG00000083642|ENST00000315596|PDS5B	REV__ENSG00000083642|ENST00000315596|PDS5B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.2507019042969	2	456.252903	910.491253	-1.6868	-0.0007696	1.5765	0.00071928	-0.1103	-5.0324E-05	456.2528624469303	52.407	1.3098	52.407	51.831	53.141	0					69	34	3	0	0	0	0.90523	1	4308	4308		40.778	0.20554	1	84817	+		20369	16858	13792	13802	23490	23490					0.03242703731382335
KGPVAKAVLD	10	Unmodified	_KGPVAKAVLD_					0	0	0			REV__ENST00000398764.3_1_9:116521276-116521525:-|nuORF	REV__ENST00000398764.3_1_9:116521276-116521525:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.3052062988281	2	499.305667	996.596781	2.5883	0.0012923	-2.3542	-0.0011755	0.23408	0.00011688	499.30452757705115	25.928	0.84452	25.497	24.983	25.827	-0.4311					32	19	2	0	0	0	0.8545	1	1366	1366		36.447	0	1	195240	+		20370	26212	13793	13803	23491	23491					0.09834619856974314
KGQAADFC	8	Unmodified	_KGQAADFC_					0	0	0			REV__ENSG00000143333|ENST00000367558|RGS16	REV__ENSG00000143333|ENST00000367558|RGS16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.19073486328125	2	420.189445	838.364338	1.7374	0.00073004	2.0855	0.00087629	3.8229	0.0016063	420.1905572526673	93.928	4.8779	94.369	91.96	96.838	0.44099					240	120	3	0	0	0	0.89962	1	11187	11187		38.806	1.647	1	4179400	+		20371	19792	13794	13804	23492	23492					-0.06130965485283468
KGQEQCRLET	10	Unmodified	_KGQEQCRLET_					0	0	0		nc|ENSG00000278224|Q2TBC4|PRICKLE4;ENSG00000278224|ENST00000458694|PRICKLE4;ENSG00000124593|ENST00000335515|unknown	nc|ENSG00000278224|Q2TBC4|PRICKLE4	nc|ENSG00000278224|Q2TBC4|PRICKLE4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.2904663085938	2	596.292962	1190.57137	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.014	1	27.917	27.417	28.417	-0.096947								0	0	0	0.45132	1	1660	1660		44.377	1.5129	1				20372	3347	13795	13805	23493	23493					-0.01629222727774504
KGQKLAEQMF	10	Unmodified	_KGQKLAEQMF_					0	0	0		ENST00000448693.2_1_3:52740223-52740934:+|nuORF;ENSG00000114902|ENST00000619898|SPCS1;nc|ENSG00000114902|Q9Y6A9|SPCS1	ENST00000448693.2_1_3:52740223-52740934:+|nuORF	ENST00000448693.2_1_3:52740223-52740934:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.3131103515625	2	590.313166	1178.61178	0.061192	3.6123E-05	1.9331	0.0011411	1.9942	0.0011772	590.3142965584613	16.457	0.23036	15.97	15.867	16.098	-0.48718					7	4	2	0	0	0	0.8545	1	138	138		36.447	2.5251	1	80784			20373	2797	13796	13806	23494	23494					0.029617436626494964
KGQKLAEQMF	10	Unmodified	_KGQKLAEQMF_					0	0	0		ENST00000448693.2_1_3:52740223-52740934:+|nuORF;ENSG00000114902|ENST00000619898|SPCS1;nc|ENSG00000114902|Q9Y6A9|SPCS1	ENST00000448693.2_1_3:52740223-52740934:+|nuORF	ENST00000448693.2_1_3:52740223-52740934:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	590.313166	1178.61178	0.35854	0.00021165	1.8344	0.0010829	2.193	0.0012945	590.3141547504182	16.453	0.18399	15.855	15.74	15.924	-0.59873	-0.05761	-7.1298E-05	NaN	36.447	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76823			20374	2797	13796	13806							0.029617436626494964
KGQLAAVLRPR	11	Unmodified	_KGQLAAVLRPR_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8814086914062	2	604.882939	1207.75132	3.1962	0.0019333	-4.0737	-0.0024641	-0.87746	-0.00053076	604.8801554490542	103.49	1.0678	103.45	103.16	104.23	-0.043755					63	25	5	0	0	0	0.78986	1	11358	11358		13.454	0	1	585280	+		20375	18791	13797	13807	23495	23495					0.15575869062217862
KGQLAAVLRPR	11	Unmodified	_KGQLAAVLRPR_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	604.882939	1207.75132	-0.48164	-0.00029134	-0.50808	-0.00030733	-0.98972	-0.00059866	604.8825603760343	103.56	0.7235	103.56	103.35	104.08	-0.0006485	0.072703	0.0017062	NaN	13.454	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120570	+		20376	18791	13797	13807							0.15575869062217862
KGQLAAVLRPR	11	Unmodified	_KGQLAAVLRPR_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	604.882939	1207.75132	3.1962	0.0019333	-4.0737	-0.0024641	-0.87746	-0.00053076	604.8801554490542	103.49	1.0678	103.45	103.16	104.23	-0.043755	-0.044984	-0.0026073	NaN	13.454	63	25	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	585280	+		20377	18791	13797	13807							0.15575869062217862
KGQTSEIL	8	Unmodified	_KGQTSEIL_					0	0	0		ENST00000558830.5_1_15:79165359-79172915:+|nuORF	ENST00000558830.5_1_15:79165359-79172915:+|nuORF	ENST00000558830.5_1_15:79165359-79172915:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.24517822265625	2	438.245275	874.475997	-0.67664	-0.00029654	-0.49424	-0.0002166	-1.1709	-0.00051313	438.24464534340893	34.961	0.48121	34.905	34.768	35.25	-0.056381					20	11	2	0	0	0	0.91472	1	2234	2234		44.117	3.5442	1	28993			20378	13796	13798	13808	23496	23496					0.03373792143509036
KGRFGEVLI	9	Unmodified	_KGRFGEVLI_					0	0	0		ENSG00000139146|ENST00000337682|SINHCAF;nc|ENSG00000139146|Q9NP50-2|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.80322265625	2	509.805834	1017.59712	-1.4574	-0.000743	-2.7703	-0.0014123	-4.2277	-0.0021553	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.78058	1	8080	8080		30.504	0.18592	1	920080			20379	4348	13799	13809	23497	23497					0.08902039576844345
KGRGLRSV	8	Unmodified	_KGRGLRSV_					0	0	0			REV__nc|ENSG00000242110|Q9UHK6-4|AMACR	REV__nc|ENSG00000242110|Q9UHK6-4|AMACR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7738952636719	2	436.774868	871.535184	0.064831	2.8317E-05	-2.643	-0.0011544	-2.5782	-0.0011261	436.77360082478805	26.186	0.49975	26.291	25.975	26.474	0.1054					37	22	2	0	0	0	0.85277	1	995	995		25.45	1.2474	1	131610	+		20380	23829	13800	13810	23498	23498					0.09427732948370249
KGRLCKVSLC	10	Unmodified	_KGRLCKVSLC_					0	0	0		ENST00000523879.5_3_14:91580571-91625235:+|nuORF	ENST00000523879.5_3_14:91580571-91625235:+|nuORF	ENST00000523879.5_3_14:91580571-91625235:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.814208984375	2	553.812279	1105.61	-0.54899	-0.00030404	3.5844	0.0019851	3.0354	0.001681	553.8141037249087	27.065	0.75811	26.889	26.523	27.281	-0.17559					35	16	3	0	0	0	0.37206	1	1530	1530		66.429	2.222	1	438870			20381	13205	13801	13811	23499	23499					0.06142411373093637
KGRLCKVSLC	10	Unmodified	_KGRLCKVSLC_					0	0	0		ENST00000523879.5_3_14:91580571-91625235:+|nuORF	ENST00000523879.5_3_14:91580571-91625235:+|nuORF	ENST00000523879.5_3_14:91580571-91625235:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8134155273438	2	553.812279	1105.61	1.609	0.00089111	0.98919	0.00054783	2.5982	0.0014389	553.8127492641156	27.044	0.65302	26.703	26.414	27.067	-0.34035					37	14	3	0	0	0	0.28217	1	1556	1556		74.255	10.721	1	354900			20382	13205	13801	13811	23500	23500					0.06142411373093637
KGRLRQRPWL	10	Unmodified	_KGRLRQRPWL_					0	0	0			REV__ENST00000561433.5_1_15:90777458-90777762:+|nuORF	REV__ENST00000561433.5_1_15:90777458-90777762:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2674255371094	3	437.270312	1308.78911	-1.5729	-0.00068777	-3.9297	-0.0017183	-5.5026	-0.0024061	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.85259	1	4220	4220		20.03	0.7678	1	4358700	+		20383	28781	13802	13812	23501	23501					0.14706380047687162
KGRRRALRA	9	Unmodified	_KGRRRALRA_					0	0	0		ENST00000215829.7_1_22:24951748-24951973:+|nuORF	ENST00000215829.7_1_22:24951748-24951973:+|nuORF	ENST00000215829.7_1_22:24951748-24951973:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.3195190429688	2	542.35214	1082.68973	-0.39792	-0.00021582	2.3022	0.0012486	1.9043	0.0010328	542.3532809902061	26.004	0.52736	25.747	25.551	26.078	-0.2572					21	11	2	0	0	0	0.20789	1	1390	1390		10.866	0	1	235230			20384	9118	13803	13813	23502	23502					0.1516898215359106
KGRSNNEKLL	10	Unmodified	_KGRSNNEKLL_					0	0	0			REV__ENST00000554710.1_1_14:81893463-81902440:-|nuORF	REV__ENST00000554710.1_1_14:81893463-81902440:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	579.8331909179688	2	579.833111	1157.65167	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.12	1	113.14	112.64	113.64	0.016953								0	0	0	0.45132	1	13690	13690		32.812	1.2826	1		+		20385	28670	13804	13814	23503	23503					0.07915006657594859
KGSCNDSP	8	Unmodified	_KGSCNDSP_					0	0	0		chr4:39745810-39774834|34|14.91|0.68|4.46|+|0|UBE2K,UBE2K|1	chr4:39745810-39774834|34|14.91|0.68|4.46|+|0|UBE2K,UBE2K|1	chr4:39745810-39774834|34|14.91|0.68|4.46|+|0|UBE2K,UBE2K|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.1700744628906	2	404.16871	806.322867	0.53213	0.00021507	2.6453	0.0010691	3.1774	0.0012842	404.1699082116052	78.324	2.0905	78.461	78.03	80.121	0.13667					171	70	5	0	0	0	0.8347	2	7425	7425;7467		25.574	3.0457	1	7251300			20386	422	13805	13815	23504;23505	23504					-0.08804146244597177
KGSCNDSP	8	Unmodified	_KGSCNDSP_					0	0	0		chr4:39745810-39774834|34|14.91|0.68|4.46|+|0|UBE2K,UBE2K|1	chr4:39745810-39774834|34|14.91|0.68|4.46|+|0|UBE2K,UBE2K|1	chr4:39745810-39774834|34|14.91|0.68|4.46|+|0|UBE2K,UBE2K|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.17022705078125	2	404.16871	806.322867	1.2665	0.00051189	1.33	0.00053756	2.5966	0.0010494	404.16957479262703	77.837	2.6073	78.242	77.72	80.327	0.40531					162	61	5	0	0	0	0.89043	1	8937	8937		35.618	2.1253	1	19504000			20387	422	13805	13815	23506	23506					-0.08804146244597177
KGSGFARI	8	Unmodified	_KGSGFARI_					0	0	0			REV__ENST00000272402.2_1_2:96933420-96934201:+|nuORF	REV__ENST00000272402.2_1_2:96933420-96934201:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.245361328125	2	418.24287	834.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.302	1	34.302	33.802	34.802	0								0	0	0	0.29631	1	1831	1831		25.45	0	1		+		20388	24545	13806	13816	23507	23507					0.04732952791403022
KGSISYQS	8	Unmodified	_KGSISYQS_					0	0	0		ENST00000555220.5_1_14:64916080-64916173:-|nuORF	ENST00000555220.5_1_14:64916080-64916173:-|nuORF	ENST00000555220.5_1_14:64916080-64916173:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2232666015625	2	435.2218	868.429047	0.32239	0.00014031	3.6661	0.0015956	3.9885	0.0017359	435.223399209331	94.324	0.97275	94.759	94.514	95.487	0.43539					50	24	3	0	0	0	0.92457	1	11313	11313		47.916	3.7988	1	1317400			20389	13731	13807	13817	23508	23508					-0.01043067407624676
KGSKVLVSG	9	Unmodified	_KGSKVLVSG_					0	0	0		ENST00000580790.1_1_10:75459274-75472997:-|nuORF	ENST00000580790.1_1_10:75459274-75472997:-|nuORF	ENST00000580790.1_1_10:75459274-75472997:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7710876464844	2	437.77146	873.528367	-1.5883	-0.00069529	1.3765	0.00060259	-0.21176	-9.2702E-05	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.7932	1	2330	2330		23.523	0.48021	1	1227500			20390	14098	13808	13818	23509	23509					0.08654375277149029
KGSKVLVSG	9	Unmodified	_KGSKVLVSG_					0	0	0		ENST00000580790.1_1_10:75459274-75472997:-|nuORF	ENST00000580790.1_1_10:75459274-75472997:-|nuORF	ENST00000580790.1_1_10:75459274-75472997:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7707824707031	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.7932	1	2256	2256		19.104	0.84144	1	1041500			20391	14098	13808	13818	23510	23510					0.08654375277149029
KGSTAINRI	9	Unmodified	_KGSTAINRI_					0	0	0			REV__ENSG00000068976|ENST00000164139|PYGM	REV__ENSG00000068976|ENST00000164139|PYGM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.28515625	2	480.285266	958.555979	0.94467	0.00045371	-0.56763	-0.00027263	0.37704	0.00018109	480.28500315130725	25.051	0.49612	24.723	24.476	24.972	-0.32825					22	10	3	0	0	0	0.41566	1	1250	1250		56.721	7.2795	1	166340	+		20392	16572	13809	13819	23511	23511					0.0750427853738529
KGSTTVRKEII	11	Unmodified	_KGSTTVRKEII_					0	0	0		nc|ENSG00000120910|P48454-3|PPP3CC	nc|ENSG00000120910|P48454-3|PPP3CC	nc|ENSG00000120910|P48454-3|PPP3CC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	410.7484436035156	3	411.250472	1230.72959	0.48877	0.00020101	-4.0152	-0.0016512	-3.5264	-0.0014502	411.58325991934197	25.61	0.10835	25.661	25.607	25.716	0.050453					7	4	2	0	0	0	0.17437	1	1029	1029		10.998	0.8943	1	12134			20393	14877	13810	13820	23512	23512					0.12345019522990697
KGSWGAEI	8	Unmodified	_KGSWGAEI_					0	0	0			REV__ENST00000403162.7_1_17:61850179-61850919:-|nuORF	REV__ENST00000403162.7_1_17:61850179-61850919:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.218505859375	2	424.21906	846.423567	-0.1837	-7.7928E-05	-1.1351	-0.00048152	-1.3188	-0.00055944	424.2185287134354	101.66	1.8082	101.68	101.04	102.85	0.01989					87	43	4	0	0	0	0.87922	1	10852	10852		31.955	1.4512	1	1878300	+		20394	26273	13811	13821	23513	23513					-0.005787461994373189
KGTIYIGKR	9	Unmodified	_KGTIYIGKR_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	519.2606811523438	2	518.319109	1034.62366	-0.85459	-0.00044295	-3.1861	-0.0016514	-4.0407	-0.0020944	518.3174599026848	86.583	3.6853	86.583	85.701	89.387	0					144	85	2	0	0	0	0.20789	1	8270	8270		17.365	0	1	166270			20395	2924	13812	13822	23514	23514					0.10773728468188892
KGTKSRKSL	9	Unmodified	_KGTKSRKSL_					0	0	0			REV__L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|48|2|sense	REV__L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|48|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	502.8139953613281	2	502.81419	1003.61383	-0.46141	-0.00023201	-0.61131	-0.00030738	-1.0727	-0.00053938	502.81389715137584	97.081	3.6095	97.312	96.652	100.26	0.23103					270	84	6	0	0	0	0.7932	1	10086	10086		24.519	0.31644	1	29832000	+		20396	29470	13813	13823	23515	23515					0.11216540462805824
KGTLAGRPAS	10	Unmodified	_KGTLAGRPAS_					0	0	0		ENST00000568025.1_1_6:166796808-166797144:+|nuORF	ENST00000568025.1_1_6:166796808-166797144:+|nuORF	ENST00000568025.1_1_6:166796808-166797144:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27728271484375	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.86698	1	7907	7907		28.081	1.2854	1	1802300			20397	13955	13814	13824	23516	23516					0.060319920203255606
KGTQARPGV	9	Unmodified	_KGTQARPGV_					0	0	0			REV__ENST00000524717.5_1_11:96074827-96074899:-|nuORF	REV__ENST00000524717.5_1_11:96074827-96074899:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2636413574219	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.67345	1	8468	8468		42.396	5.9494	1	4814400	+		20398	28170	13815	13825	23517	23517					0.05435722848858404
KGTRGPPGAS	10	Unmodified	_KGTRGPPGAS_					0	0	0		nc|ENSG00000187498|P02462-2|COL4A1;ENSG00000187498|ENST00000375820|COL4A1	nc|ENSG00000187498|P02462-2|COL4A1	nc|ENSG00000187498|P02462-2|COL4A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.25433349609375	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.73395	1	9866	9866		42.864	0.38981	1	1215000			20399	7855	13816	13826	23518	23518					0.027191324691898444
KGTSKENRNLL	11	Unmodified	_KGTSKENRNLL_					0	0	0		nc|ENSG00000213390|Q14CB8-6|ARHGAP19;nc|ENSG00000213390|Q14CB8-7|ARHGAP19;nc|ENSG00000213390|Q14CB8-3|ARHGAP19;ENSG00000213390|ENST00000358531|ARHGAP19;nc|ENSG00000213390|Q14CB8-2|ARHGAP19;nc|ENSG00000213390|Q14CB8-4|ARHGAP19;ENST00000487035.1_1_10:98985881-99016222:-|nuORF;ENST00000492211.5_1_10:98985881-99018422:-|nuORF	nc|ENSG00000213390|Q14CB8-6|ARHGAP19	nc|ENSG00000213390|Q14CB8-6|ARHGAP19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.575439453125	3	420.573726	1258.69935	-0.24128	-0.00010148	4.1156	0.0017309	3.8743	0.0016294	420.5753949559437	45.518	0.89418	45.99	45.563	46.457	0.47139					60	21	4	0	0	0	0.71207	1	4250	4250		29.551	2.5034	1	5843600			20400	8587	13817	13827	23519	23519					0.08034660857811105
KGTSVLSAT	9	Unmodified	_KGTSVLSAT_					0	0	0			REV__ENST00000455028.1_1_21:36509013-36511212:+|nuORF	REV__ENST00000455028.1_1_21:36509013-36511212:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.2471008300781	2	432.245275	862.475997	0.71048	0.0003071	3.2596	0.001409	3.9701	0.0017161	432.2467662501791	97.978	1.1971	98.139	97.71	98.908	0.16073					69	26	4	0	0	0	0.77546	1	10160	10160		31.955	1.4512	1	628050	+		20401	26938	13818	13828	23520	23520					0.03925792143536455
KGTVSGTLI	9	Unmodified	_KGTVSGTLI_					0	0	0		ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000169174|Q8NBP7-2|PCSK9;ENST00000490692.1_1_1:55517886-55523720:+|nuORF	ENSG00000169174|ENST00000302118|PCSK9	ENSG00000169174|ENST00000302118|PCSK9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2633361816406	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.7932	1	3122	3122		21.96	1.4781	1	22029000			20402	6475	13819	13829	23521	23521					0.0701066904025538
KGVARPVLL	9	Unmodified	_KGVARPVLL_					0	0	0			REV__ENSG00000141527|ENST00000648509|CARD14	REV__ENSG00000141527|ENST00000648509|CARD14	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.57086181640625	2	476.818744	951.622936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.185	1	48.207	47.707	48.707	0.02227								0	0	0	0.35896	1	3653	3653		12.207	1.3413	1		+		20403	19692	13820	13830	23522	23522					0.14518933819135782
KGVDQKKEPAV	11	Unmodified	_KGVDQKKEPAV_					0	0	0			REV__ENSG00000136628|ENST00000366923|EPRS1	REV__ENSG00000136628|ENST00000366923|EPRS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2301025390625	3	400.231189	1197.67174	-1.8913	-0.00075696	-0.42008	-0.00016813	-2.3114	-0.00092509	400.2310265990648	42.098	0.5195	42.796	42.532	43.052	0.69754					30	12	3	0	0	0	0.69687	1	3748	3748		32.034	0	1	1049000	+		20404	19322	13821	13831	23523	23523					0.08080757597554111
KGVDQKKEPAV	11	Unmodified	_KGVDQKKEPAV_					0	0	0			REV__ENSG00000136628|ENST00000366923|EPRS1	REV__ENSG00000136628|ENST00000366923|EPRS1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	400.231189	1197.67174	-1.8913	-0.00075696	-0.42008	-0.00016813	-2.3114	-0.00092509	400.2310265990648	42.098	0.5195	42.796	42.532	43.052	0.69754	0.051156	0.00084677	NaN	32.034	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1049000	+		20405	19322	13821	13831							0.08080757597554111
KGVGPAGLL	9	Unmodified	_KGVGPAGLL_					0	0	0			REV__ENSG00000166592|ENST00000299759|RRAD	REV__ENSG00000166592|ENST00000299759|RRAD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.257568359375	2	406.255446	810.496338	1.5179	0.00061664	2.6476	0.0010756	4.1655	0.0016923	406.25644581486745	58.63	2.4476	58.664	57.505	59.952	0.033909					98	70	2	0	0	0	0.7932	1	5253	5253		26.796	6.3143	1	114000	+		20406	21307	13822	13832	23524	23524					0.08351007594001203
KGVGPGRVA	9	Unmodified	_KGVGPGRVA_					0	0	0			REV__ENST00000376257.7_1_6:31127078-31127210:+|nuORF	REV__ENST00000376257.7_1_6:31127078-31127210:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7550354003906	2	420.756144	839.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.978	1	21.535	21.035	22.035	-0.44324								0	0	0	0.2969	1	846	846		31.955	0	1		+		20407	25833	13823	13833	23525	23525					0.07156641682740883
KGVIILGI	8	Unmodified	_KGVIILGI_					0	0	0			REV__ENSG00000198843|ENST00000471696|SELENOT	REV__ENSG00000198843|ENST00000471696|SELENOT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7853698730469	2	406.783839	811.553125	0.20394	8.2959E-05	3.6434	0.0014821	3.8473	0.001565	406.7851787446003	29.647	1.7935	29.678	29.075	30.869	0.030947					149	52	4	0	0	0	0.86288	1	1503	1503		26.796	5.0938	1	789640	+		20408	23396	13824	13834	23526	23526					0.13981055150509292
KGVIILGI	8	Unmodified	_KGVIILGI_					0	0	0			REV__ENSG00000198843|ENST00000471696|SELENOT	REV__ENSG00000198843|ENST00000471696|SELENOT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7850646972656	2	406.783839	811.553125	2.7329	0.0011117	1.0571	0.00043001	3.79	0.0015417	406.7841375125675	29.651	1.9122	29.636	28.895	30.807	-0.015167					147	57	4	0	0	0	0.86791	1	1551	1551		28.254	1.4582	1	914260	+		20409	23396	13824	13834	23527	23527					0.13981055150509292
KGVLRRRA	8	Unmodified	_KGVLRRRA_					0	0	0		ENST00000315183.11_2_16:24835528-24835630:+|nuORF	ENST00000315183.11_2_16:24835528-24835630:+|nuORF	ENST00000315183.11_2_16:24835528-24835630:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.31488037109375	2	478.317235	954.619916	-1.818	-0.00086957	-4.1885	-0.0020034	-6.0065	-0.002873	478.31510795693185	35.448	1.0031	35.448	35.005	36.008	0					44	26	2	0	0	0	0.81724	1	1956	1956		14.664	0	1	76605			20410	9972	13825	13835	23528	23528					0.14079103484971256
KGVRVKETA	9	Unmodified	_KGVRVKETA_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.3009948730469	2	494.300916	986.587279	-0.0748	-3.6974E-05	-0.3174	-0.00015689	-0.3922	-0.00019387	494.30075143902303	97.483	4.0876	97.54	96.775	100.86	0.056839					393	94	6	0	0	0	0.78983	1	10500	10500		27.882	1.1893	1	54076000			20411	8114	13826	13836	23529	23529					0.09344851571472645
KGVRVKETA	9	Unmodified	_KGVRVKETA_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3010559082031	2	494.300916	986.587279	0.76681	0.00037903	-1.1549	-0.00057088	-0.38812	-0.00019185	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.77696	1	10330	10330		31.53	1.2121	1	52135000			20412	8114	13826	13836	23530	23530					0.09344851571472645
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.3010559082031	2	494.300916	986.587279	-0.82421	-0.00040741	0.56645	0.00028	-0.25775	-0.00012741	494.3011394049625	97.613	4.008	97.613	96.986	100.99	0					359	95	6	0	0	0	0.80179	1	9868	9868		39.253	8.7492	1	29815000	+		20413	20923	13827	13837	23531	23531					0.09344851571461277
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.3009338378906	2	494.300916	986.587279	-0.0748	-3.6974E-05	-0.3174	-0.00015689	-0.3922	-0.00019387	494.30075143902303	97.483	4.0876	97.54	96.775	100.86	0.056839					393	94	6	0	0	0	0.54701	6	10390	10365;10378;10390;10414;10438;10559		52.937	16.823	1	54076000	+		20414	20923	13827	13837	23532;23533;23534;23535;23536;23537	23534					0.09344851571461277
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.30157470703125	2	494.300916	986.587279	-0.074576	-3.6863E-05	0.072745	3.5958E-05	-0.0018316	-9.0536E-07	494.3008543096205	101.11	1.0407	101.14	100.7	101.74	0.031029					60	24	4	0	0	0	0.86763	1	10788	10788		26.693	2.4902	1	661040	+		20415	20923	13827	13837	23538	23538					0.09344851571461277
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3008728027344	2	494.300916	986.587279	2.3073	0.0011405	-2.72	-0.0013445	-0.41277	-0.00020403	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.67571	3	10594	10582;10594;10733		45.972	7.2972	1	53958000	+		20416	20923	13827	13837	23539;23540;23541	23540					0.09344851571461277
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3009338378906	2	494.300916	986.587279	-0.67103	-0.00033169	0.2629	0.00012995	-0.40813	-0.00020174	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.54701	2	10432	10432;10457		52.937	14.131	1	54981000	+		20417	20923	13827	13837	23542;23543	23542					0.09344851571461277
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30078125	2	494.300916	986.587279	-0.58723	-0.00029027	0.13313	6.5808E-05	-0.4541	-0.00022446	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.77314	1	10145	10145		40.778	4.3314	1	65263000	+		20418	20923	13827	13837	23544	23544					0.09344851571461277
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30029296875	2	494.300916	986.587279	-0.58165	-0.00028751	0.50872	0.00025146	-0.072933	-3.6051E-05	494.30110008283356	100.79	1.5343	100.99	100.36	101.9	0.2058					82	36	3	0	0	0	0.86348	1	10552	10552		31.53	1.0262	1	820880	+		20419	20923	13827	13837	23545	23545					0.09344851571461277
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3008728027344	2	494.300916	986.587279	-0.58187	-0.00028762	0.6538	0.00032317	0.071931	3.5555E-05	494.3012065924571	103.17	0.98251	103.35	103.08	104.07	0.18298					55	24	3	0	0	0	0.8608	1	10900	10900		34.173	5.023	1	1020600	+		20420	20923	13827	13837	23546	23546					0.09344851571461277
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.30059814453125	2	494.300916	986.587279	0.76681	0.00037903	-1.1549	-0.00057088	-0.38812	-0.00019185	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.64457	2	10166	10142;10166		47.657	7.5992	1	52135000	+		20421	20923	13827	13837	23547;23548	23548					0.09344851571461277
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.29931640625	2	494.300916	986.587279	0.79689	0.0003939	-0.92973	-0.00045957	-0.13284	-6.5664E-05	494.3003729915352	100.82	1.5238	100.97	100.42	101.94	0.14352					78	36	3	0	0	0	0.86348	1	10581	10581		31.53	2.3598	1	706980	+		20422	20923	13827	13837	23549	23549					0.09344851571461277
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3007507324219	2	494.300916	986.587279	-1.6335	-0.00080746	1.1761	0.00058136	-0.4574	-0.0002261	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.80179	3	10070	10022;10046;10070		39.253	7.298	1	46933000	+		20423	20923	13827	13837	23550;23551;23552	23552					0.09344851571461277
KGVRVVTASA	10	Unmodified	_KGVRVVTASA_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.3007507324219	2	494.300916	986.587279	0.88078	0.00043537	-1.0905	-0.00053901	-0.20967	-0.00010364	494.3002880194073	97.072	3.8769	97.462	96.82	100.7	0.39066					309	95	6	0	0	0	0.54701	1	11718	11718		52.937	18.764	1	27149000	+		20424	20923	13827	13837	23553	23553					0.09344851571461277
KGVTKSTI	8	Unmodified	_KGVTKSTI_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;ENST00000583043.5_1_18:67684852-67806940:-|nuORF;ENST00000581709.1_1_18:67758841-67776916:-|nuORF	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2580871582031	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.84696	1	1002	1002		10.866	0.6003	1	1763000			20425	7065	13828	13838	23554	23554					0.07886686385802477
KGVTSVLVCL	10	Unmodified	_KGVTSVLVCL_					0	0	0			REV__nc|ENSG00000114107|Q8NHQ1-2|CEP70	REV__nc|ENSG00000114107|Q8NHQ1-2|CEP70	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8041687011719	2	509.801903	1017.58925	2.6797	0.0013661	1.8365	0.00093626	4.5162	0.0023024	509.80259900501994	99.442	1.3968	99.388	98.868	100.26	-0.053741					77	32	4	0	0	0	0.8651	1	10775	10775		25.574	2.5316	1	480070	+		20426	18030	13829	13839	23555	23555					0.08116144265068215
KGVTVRTLSA	10	Unmodified	_KGVTVRTLSA_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.314208984375	2	516.314023	1030.61349	1.791	0.00092474	-1.8271	-0.00094338	-0.036105	-1.8641E-05	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.81117	1	12072	12072		38.754	7.2238	1	24820000			20427	1068	13830	13840	23556	23556					0.0994112074295117
KGWKFKRLL	9	Unmodified	_KGWKFKRLL_					0	0	0			REV__ENSG00000007520|ENST00000007390|TSR3	REV__ENSG00000007520|ENST00000007390|TSR3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	588.3829956054688	2	588.374218	1174.73388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.25	1	17.313	16.813	17.813	0.062603								0	0	0	0.34024	1	235	235		17.365	1.7232	1		+		20428	16124	13831	13841	23557	23557					0.153505735272347
KGYLVRSLL	9	Unmodified	_KGYLVRSLL_					0	0	0		nc|ENSG00000166578|Q96DY2-2|IQCD;ENSG00000166578|ENST00000416617|IQCD	nc|ENSG00000166578|Q96DY2-2|IQCD	nc|ENSG00000166578|Q96DY2-2|IQCD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8270874023438	2	524.829309	1047.64407	-1.5341	-0.00080515	-2.1406	-0.0011234	-3.6747	-0.0019286	524.8280472672277	102.21	1.1307	102.34	101.89	103.02	0.13569					72	27	3	0	0	0	0.7932	1	10635	10635		26.693	1.2427	1	626370			20429	6211	13832	13842	23558	23558					0.12214899127980061
KGYYLVWLV	9	Unmodified	_KGYYLVWLV_					0	0	0		ENSG00000183862|ENST00000329903|CNGA2	ENSG00000183862|ENST00000329903|CNGA2	ENSG00000183862|ENST00000329903|CNGA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8258056640625	2	570.826235	1139.63792	-1.0085	-0.00057568	-0.92642	-0.00052883	-1.9349	-0.0011045	570.8254743342769	59.03	1.033	59.422	58.941	59.974	0.39209					57	24	3	0	0	0	0.76996	1	6220	6220		33.516	3.0119	1	913650			20430	7568	13833	13843	23559	23559					0.0736838089644607
KHALLLKVIK	10	Unmodified	_KHALLLKVIK_					0	0	0			REV__nc|ENSG00000132466|O75179-6|ANKRD17	REV__nc|ENSG00000132466|O75179-6|ANKRD17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.8048095703125	2	581.905351	1161.79615	-0.43219	-0.00025149	3.5837	0.0020854	3.1515	0.0018339	582.4062056555806	62.764	0.21576	63.318	63.166	63.382	0.55449					6	4	2	0	0	0	0.37624	1	6748	6748		35.618	6.4687	1	120020	+		20431	19005	13834	13844	23560	23560					0.22172299875546742
KHAPIAVP	8	Unmodified	_KHAPIAVP_					0	0	0			REV__ENST00000495648.3_1_2:39499422-39505556:-|nuORF	REV__ENST00000495648.3_1_2:39499422-39505556:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7547912597656	2	416.755613	831.496673	0.047442	1.9772E-05	-1.1428	-0.00047629	-1.0954	-0.00045652	416.7550156148421	65.976	1.6616	66.528	65.948	67.61	0.5526					110	49	3	0	0	0	0.82464	1	7274	7274		21.702	0	1	3875200	+		20432	16187	13835	13845	23561	23561					0.07418427313837128
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2633972167969	2	438.264136	874.51372	-1.9277	-0.00084486	0.24503	0.00010739	-1.6827	-0.00073747	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.85277	2	2139	2139;2163		40.573	3.4903	1	3507500	+		20433	23491	13836	13846	23562;23563	23562					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2633361816406	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.90465	1	2762	2762		40.573	5.3719	1	3384400	+		20434	23491	13836	13846	23564	23564					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2634582519531	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.87922	1	2475	2475		31.955	6.5047	1	3673500	+		20435	23491	13836	13846	23565	23565					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2630310058594	2	438.264136	874.51372	0.23628	0.00010355	-2.5171	-0.0011032	-2.2808	-0.00099961	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.87922	1	3036	3036		31.955	4.0726	1	5350400	+		20436	23491	13836	13846	23566	23566					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26373291015625	2	438.264136	874.51372	-1.0936	-0.00047928	-0.34853	-0.00015275	-1.4421	-0.00063203	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.86288	4	2807	2674;2696;2760;2807		42.474	11.473	1	2862500	+		20437	23491	13836	13846	23567;23568;23569;23570	23570					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2629089355469	2	438.264136	874.51372	-1.2142	-0.00053214	-0.86056	-0.00037715	-2.0748	-0.00090929	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.85277	3	3241	3241;3253;3373		33.516	4.9683	1	4828000	+		20438	23491	13836	13846	23571;23572;23573	23571					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633361816406	2	438.264136	874.51372	-0.25936	-0.00011367	-1.4504	-0.00063564	-1.7097	-0.00074931	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.85277	3	2573	2573;2629;2678		31.955	5.1588	1	2361100	+		20439	23491	13836	13846	23574;23575;23576	23574					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2628173828125	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.85277	2	3236	3155;3236		40.573	7.057	1	4268300	+		20440	23491	13836	13846	23577;23578	23578					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26226806640625	2	438.264136	874.51372	-1.5833	-0.00069392	-0.15448	-6.7702E-05	-1.7378	-0.00076162	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.87479	3	2120	1906;2033;2120		40.573	4.366	1	11160000	+		20441	23491	13836	13846	23579;23580;23581	23581					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26318359375	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.85277	2	2716	2597;2716		33.516	4.366	1	22924000	+		20442	23491	13836	13846	23582;23583	23583					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2626953125	2	438.264136	874.51372	0.15263	6.689E-05	-1.9074	-0.00083592	-1.7547	-0.00076903	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.81548	4	2091	1997;2015;2068;2091		31.955	6.5047	1	11370000	+		20443	23491	13836	13846	23584;23585;23586;23587	23587					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26220703125	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.884	4	2538	2538;2622;2703;2725		35.201	5.2613	1	22029000	+		20444	23491	13836	13846	23588;23589;23590;23591	23588					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2641906738281	2	438.264136	874.51372	0.037237	1.632E-05	-1.83	-0.00080201	-1.7927	-0.00078569	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.85277	5	1850	1850;1900;2047;2057;2090		33.516	6.3808	1	10667000	+		20445	23491	13836	13846	23592;23593;23594;23595;23596	23592					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2619323730469	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.884	4	2564	2564;2573;2631;2681		47.916	10.104	1	21381000	+		20446	23491	13836	13846	23597;23598;23599;23600	23597					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.263427734375	2	438.264136	874.51372	0.27759	0.00012166	-2.5692	-0.001126	-2.2916	-0.0010043	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.90465	1	2665	2665		40.573	5.3719	1	85249000	+		20447	23491	13836	13846	23601	23601					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2613830566406	2	438.264136	874.51372	-2.4769	-0.0010856	-1.2978	-0.00056879	-3.7748	-0.0016543	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.90465	2	3481	3481;3637		40.573	2.7611	1	246320000	+		20448	23491	13836	13846	23602;23603	23602					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2634582519531	2	438.264136	874.51372	1.5783	0.00069171	-3.9402	-0.0017268	-2.3619	-0.0010351	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.87922	2	2665	2665;2773		33.516	2.7848	1	92475000	+		20449	23491	13836	13846	23604;23605	23604					0.07144347919654592
KHAPPGLR	8	Unmodified	_KHAPPGLR_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2630310058594	2	438.264136	874.51372	-1.2747	-0.00055866	-2.1943	-0.00096169	-3.469	-0.0015203	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.87922	3	3637	3637;3686;3709		40.573	12.318	1	219150000	+		20450	23491	13836	13846	23606;23607;23608	23606					0.07144347919654592
KHAQKPSQP	9	Unmodified	_KHAQKPSQP_					0	0	0		ENSG00000122965|ENST00000261741|RBM19;ENST00000546876.1_1_12:114395795-114403964:-|nuORF	ENSG00000122965|ENST00000261741|RBM19	ENSG00000122965|ENST00000261741|RBM19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.7807922363281	2	510.78289	1019.55123	-0.062615	-3.1982E-05	0.15109	7.7173E-05	0.088474	4.5191E-05	510.7827979768825	26.396	0.70906	26.358	26.096	26.805	-0.038523					36	14	3	0	0	0	0.30689	1	1185	1185		64.207	0.7808	1	179820			20451	3255	13837	13847	23609	23609					0.04223394394614388
KHAQKRRA	8	Unmodified	_KHAQKRRA_					0	0	0		ENSG00000160972|ENST00000435887|PPP1R16A	ENSG00000160972|ENST00000435887|PPP1R16A	ENSG00000160972|ENST00000435887|PPP1R16A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.712890625	2	497.804491	993.59443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.446	1	67.498	66.998	67.998	0.052368								0	0	0	0.29498	1	6009	6009		26.796	1.3459	1				20452	5623	13838	13848	23610	23610					0.0973762896255721
KHCNIEPH	8	Unmodified	_KHCNIEPH_					0	0	0			REV__ENSG00000183354|ENST00000399933|KIAA2026	REV__ENSG00000183354|ENST00000399933|KIAA2026	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.2367248535156	2	489.234719	976.454884	-0.77306	-0.00037821	4.0901	0.002001	3.3171	0.0016228	489.23682963313604	63.081	1.9408	63.104	62.828	64.768	0.022984					241	80	5	0	0	0	0.88915	1	5505	5505		35.201	1.7077	1	3852300	+		20453	22601	13839	13849	23611	23611					-0.03428496436981732
KHDVRSLIGSP	11	Unmodified	_KHDVRSLIGSP_					0	0	0		nc|ENSG00000196498|Q9Y618-5|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;ENSG00000196498|ENST00000405201|NCOR2	nc|ENSG00000196498|Q9Y618-5|NCOR2	nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3663330078125	2	604.840936	1207.66732	0.90471	0.0005472	1.2338	0.00074625	2.1385	0.0012935	604.8418187087962	104.34	0.24055	104.46	104.24	104.48	0.11685					13	5	3	0	0	0	0.17396	1	11050	11050		16.717	0	1	309510			20454	8064	13840	13850	23612	23612					0.07179293174658596
KHEKPKTK	8	Unmodified	_KHEKPKTK_					0	0	0			REV__nc|ENSG00000085224|P46100-2|ATRX	REV__nc|ENSG00000085224|P46100-2|ATRX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.3036193847656	2	498.303458	994.592364	-0.84093	-0.00041904	0.4411	0.0002198	-0.39983	-0.00019923	498.3034939638698	32.085	0.68452	32.211	31.775	32.459	0.12643					32	15	3	0	0	0	0.79403	1	2211	2211		63.306	5.495	1	298100	+		20455	16884	13841	13851	23613	23613					0.0948515543409485
KHEKRNIIVA	10	Unmodified	_KHEKRNIIVA_					0	0	0			REV__ENSG00000033867|ENST00000454389|SLC4A7;REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENSG00000033867|ENST00000454389|SLC4A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3662719726562	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.86471	1	11355	11355		30.318	2.2362	1	63350000	+		20456	16283;19880	13842	13852	23614	23614					0.12459876308275852
KHEKRNIIVA	10	Unmodified	_KHEKRNIIVA_					0	0	0			REV__ENSG00000033867|ENST00000454389|SLC4A7;REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENSG00000033867|ENST00000454389|SLC4A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3663940429688	2	604.367121	1206.71969	3.2045	0.0019367	-4.3338	-0.0026192	-1.1294	-0.00068255	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.8651	1	11522	11522		25.574	2.0514	1	63446000	+		20457	16283;19880	13842	13852	23615	23615					0.12459876308275852
KHEKRNIIVA	10	Unmodified	_KHEKRNIIVA_					0	0	0			REV__ENSG00000033867|ENST00000454389|SLC4A7;REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENSG00000033867|ENST00000454389|SLC4A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3663940429688	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.86471	1	11441	11441		30.318	5.7985	1	64334000	+		20458	16283;19880	13842	13852	23616	23616					0.12459876308275852
KHFNKPVSGP	10	Unmodified	_KHFNKPVSGP_					0	0	0		nc|ENSG00000157303|Q96L08-3|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;ENSG00000157303|ENST00000375472|SUSD3	nc|ENSG00000157303|Q96L08-3|SUSD3	nc|ENSG00000157303|Q96L08-3|SUSD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.8064575195312	2	555.806365	1109.59818	-1.0593	-0.00058879	0.9671	0.00053752	-0.092238	-5.1266E-05	555.8068254201057	59.586	0.60949	59.586	59.286	59.895	0					39	22	2	0	0	0	0.51302	1	5199	5199		54.776	3.4409	1	180100			20459	5421	13843	13853	23617	23617					0.04776253945783537
KHFNKPVSGP	10	Unmodified	_KHFNKPVSGP_					0	0	0		nc|ENSG00000157303|Q96L08-3|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;ENSG00000157303|ENST00000375472|SUSD3	nc|ENSG00000157303|Q96L08-3|SUSD3	nc|ENSG00000157303|Q96L08-3|SUSD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.805908203125	2	555.806365	1109.59818	0.60306	0.00033519	-0.9158	-0.00050901	-0.31274	-0.00017382	555.8058596717976	59.48	0.90499	59.448	59.077	59.982	-0.031731					51	22	3	0	0	0	0.44803	1	5601	5601		60.118	7.1816	1	344520			20460	5421	13843	13853	23618	23618					0.04776253945783537
KHFRRQLFWVQ	11	Unmodified	_KHFRRQLFWVQ_					0	0	0			REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF	REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.7648315429688	3	515.624755	1543.85244	-0.12916	-6.66E-05	-0.37337	-0.00019252	-0.50253	-0.00025912	515.6245610354887	53.367	1.0424	53.982	53.572	54.614	0.61436					43	24	2	0	0	0	0.181	1	5409	5409		18.531	3.8374	1	309960	+		20461	19930	13844	13854	23619	23619					0.10226320764900265
KHFYYQHNFF	10	Unmodified	_KHFYYQHNFF_					0	0	0		ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7776794433594	3	477.559528	1429.65676	-0.74817	-0.00035729	-2.1142	-0.0010097	-2.8624	-0.001367	477.8926430149764	30.203	0.3064	30.113	29.96	30.267	-0.089544					11	6	2	0	0	0	0.37624	1	1985	1985		12.207	3.4074	1	60056			20462	2641	13845	13855	23620	23620					-0.040886894797949935
KHGEKTRRVSS	11	Unmodified	_KHGEKTRRVSS_					0	0	0		nc|ENSG00000174501|Q5JPF3|ANKRD36C;ENSG00000174501|ENST00000295246|ANKRD36C;nc|ENSG00000174501|Q5JPF3-3|ANKRD36C;ENST00000534304.5_1_2:96525807-96601268:-|nuORF	nc|ENSG00000174501|Q5JPF3|ANKRD36C	nc|ENSG00000174501|Q5JPF3|ANKRD36C	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3634643554688	2	642.860192	1283.70583	1.7345	0.001115	3.2618	0.0020969	4.9963	0.0032119	642.8634088642048	112.23	0.14008	112.26	112.22	112.36	0.028854					6	4	2	0	0	0	0.17692	1	12278	12278		28.081	7.2443	1	814930			20463	6941	13846	13856	23621	23621					0.07532598809166302
KHGLEVIYT	9	Unmodified	_KHGLEVIYT_					0	0	0		ENST00000378770.1_1_4:190394307-190396341:+|nuORF;nc|ENSG00000205100|Q58FG1|HSP90AA4P	ENST00000378770.1_1_4:190394307-190396341:+|nuORF	ENST00000378770.1_1_4:190394307-190396341:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2932739257812	2	530.295299	1058.57605	-0.73575	-0.00039016	-2.8196	-0.0014952	-3.5553	-0.0018854	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.78536	1	8956	8956		29.15	2.4566	1	1390700			20464	10874	13847	13857	23622	23622					0.049100294773325004
KHGLEVIYT	9	Unmodified	_KHGLEVIYT_					0	0	0		ENST00000378770.1_1_4:190394307-190396341:+|nuORF;nc|ENSG00000205100|Q58FG1|HSP90AA4P	ENST00000378770.1_1_4:190394307-190396341:+|nuORF	ENST00000378770.1_1_4:190394307-190396341:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.29296875	2	530.295299	1058.57605	-1.2396	-0.00065735	-2.6354	-0.0013976	-3.875	-0.0020549	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.67345	2	10806	10806;10855		42.396	3.1433	1	1818700			20465	10874	13847	13857	23623;23624	23623					0.049100294773325004
KHGYSKINKK	10	Unmodified	_KHGYSKINKK_					0	0	0		ENST00000478965.1_1_5:94161779-94162088:-|nuORF	ENST00000478965.1_1_5:94161779-94162088:-|nuORF	ENST00000478965.1_1_5:94161779-94162088:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.8579711914062	2	601.853847	1201.69314	3.2383	0.001949	3.0339	0.0018259	6.2721	0.0037749	601.8555799865445	103.53	2.0205	103.49	103.12	105.14	-0.043755					118	48	4	0	0	0	0.86047	1	11333	11333		23.523	0	1	1395200			20466	12399	13848	13858	23625	23625					0.10036187416926623
KHHCHCGYGWS	11	Unmodified	_KHHCHCGYGWS_					0	0	0		ENSG00000139985|ENST00000603540|ADAM21	ENSG00000139985|ENST00000603540|ADAM21	ENSG00000139985|ENST00000603540|ADAM21	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2294921875	3	438.846686	1313.51823	-1.0196	-0.00044743	2.8093	0.0012329	1.7898	0.00078544	438.8482388632347	28.477	0.2435	28.38	28.299	28.542	-0.096947					6	5	2	0	0	0	0.1767	1	1716	1716		18.531	0	1	24721			20467	4406	13849	13859	23626	23626					-0.12598878991411766
KHHKSTPLLIH	11	Unmodified	_KHHKSTPLLIH_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.5936279296875	3	437.594573	1309.76189	0.57035	0.00024958	-2.4363	-0.0010661	-1.8659	-0.00081652	437.59337174172776	17.144	0.52434	17.12	16.872	17.396	-0.024035					55	24	3	0	0	0	0.74405	1	226	226		23.378	2.3457	1	367140			20468	1462	13850	13860	23627	23627					0.11939851716670091
KHIIGLVP	8	Unmodified	_KHIIGLVP_					0	0	0		nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2636413574219	2	438.786913	875.559273	1.503	0.00065951	4.4421	0.0019492	5.9452	0.0026087	438.78928902222447	34.849	0.53924	35.23	35.02	35.559	0.3812					20	13	2	0	0	0	0.4196	1	2605	2605		26.796	11.16	1	256380			20469	687	13851	13861	23628	23628					0.1165157338203926
KHIKSVLNILS	11	Unmodified	_KHIKSVLNILS_					0	0	0		nc|ENSG00000133863|Q9BXT5|TEX15;ENSG00000133863|ENST00000643185|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3837280273438	2	626.392805	1250.77106	0.9303	0.00058274	4.4069	0.0027605	5.3372	0.0033432	626.3955935475492	112.82	0.64684	112.85	112.73	113.38	0.028854					20	16	2	0	0	0	0.17243	1	12348	12348		13.454	1.8181	1	1873700			20470	3897	13852	13862	23629	23629					0.15570200282309088
KHIKSVLNILS	11	Unmodified	_KHIKSVLNILS_					0	0	0		nc|ENSG00000133863|Q9BXT5|TEX15;ENSG00000133863|ENST00000643185|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	626.392805	1250.77106	2.3219	0.0014544	6.3294	0.0039647	8.6513	0.0054191	626.396700278848	112.54	0.28845	112.57	112.51	112.8	0.030602	-0.14222	0.00069954	NaN	13.454	13	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57994			20471	3897	13852	13862							0.15570200282309088
KHILKNLRIIA	11	Unmodified	_KHILKNLRIIA_					0	0	0		ENSG00000278505|ENST00000615133|C17orf78;nc|nan|Q8N4C9-2|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.2917175292969	3	440.294235	1317.86087	0.12493	5.5008E-05	-4.4297	-0.0019504	-4.3048	-0.0018954	440.29209490830686	59.759	1.3614	59.791	59.261	60.623	0.032825					81	34	3	0	0	0	0.7896	1	5518	5518		13.508	3.404	1	212730			20472	9030	13853	13863	23630	23630					0.21465874681553032
KHILTSFIPIN	11	Unmodified	_KHILTSFIPIN_					0	0	0			REV__ENSG00000119927|ENST00000348367|GPAM	REV__ENSG00000119927|ENST00000348367|GPAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8822021484375	2	641.87953	1281.74451	2.6248	0.0016848	1.9473	0.0012499	4.5721	0.0029347	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.66929	1	11785	11785		36.447	4.9169	1	4455800	+		20473	18387	13854	13864	23631	23631					0.11490511391002656
KHIPPFMPRQ	10	Unmodified	_KHIPPFMPRQ_					0	0	0			REV__ENSG00000185775|ENST00000332857|SPATA31A6	REV__ENSG00000185775|ENST00000332857|SPATA31A6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.258544921875	3	417.565737	1249.67538	1.1773	0.0004916	-3.6652	-0.0015305	-2.4879	-0.0010389	417.56422197964736	33.638	0.41458	33.807	33.61	34.025	0.16971					13	9	2	0	0	0	0.37624	1	2421	2421		31.634	9.5588	1	80105	+		20474	22791	13855	13865	23632	23632					0.06053148890441662
KHIPRGAP	8	Unmodified	_KHIPRGAP_					0	0	0			REV__nc|ENSG00000186854|Q86V40-2|TRABD2A	REV__nc|ENSG00000186854|Q86V40-2|TRABD2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26220703125	2	438.264136	874.51372	0.23628	0.00010355	-2.5171	-0.0011032	-2.2808	-0.00099961	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.86288	1	3310	3310		26.796	7.4361	1	5350400	+		20475	22883	13856	13866	23633	23633					0.07144347919643224
KHIPRGAP	8	Unmodified	_KHIPRGAP_					0	0	0			REV__nc|ENSG00000186854|Q86V40-2|TRABD2A	REV__nc|ENSG00000186854|Q86V40-2|TRABD2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26275634765625	2	438.264136	874.51372	-1.5833	-0.00069392	-0.15448	-6.7702E-05	-1.7378	-0.00076162	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.85277	1	2109	2109		25.45	0	1	11160000	+		20476	22883	13856	13866	23634	23634					0.07144347919643224
KHIPRGAP	8	Unmodified	_KHIPRGAP_					0	0	0			REV__nc|ENSG00000186854|Q86V40-2|TRABD2A	REV__nc|ENSG00000186854|Q86V40-2|TRABD2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2626647949219	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.86288	1	2799	2799		26.796	5.8492	1	22029000	+		20477	22883	13856	13866	23635	23635					0.07144347919643224
KHIPRGAP	8	Unmodified	_KHIPRGAP_					0	0	0			REV__nc|ENSG00000186854|Q86V40-2|TRABD2A	REV__nc|ENSG00000186854|Q86V40-2|TRABD2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26361083984375	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.79929	2	2878	2878;2982		31.955	11.008	1	21381000	+		20478	22883	13856	13866	23636;23637	23636					0.07144347919643224
KHIVGKGH	8	Unmodified	_KHIVGKGH_					0	0	0			REV__ENSG00000137275|ENST00000259808|RIPK1	REV__ENSG00000137275|ENST00000259808|RIPK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2630310058594	2	438.264136	874.51372	-1.9277	-0.00084486	0.24503	0.00010739	-1.6827	-0.00073747	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.86288	1	2550	2550		26.796	2.2921	1	3507500	+		20479	19375	13857	13867	23638	23638					0.07144347919654592
KHIVGKGH	8	Unmodified	_KHIVGKGH_					0	0	0			REV__ENSG00000137275|ENST00000259808|RIPK1	REV__ENSG00000137275|ENST00000259808|RIPK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2625732421875	2	438.264136	874.51372	-1.2142	-0.00053214	-0.86056	-0.00037715	-2.0748	-0.00090929	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.82464	1	3443	3443		21.702	1.2205	1	4828000	+		20480	19375	13857	13867	23639	23639					0.07144347919654592
KHIVGKGH	8	Unmodified	_KHIVGKGH_					0	0	0			REV__ENSG00000137275|ENST00000259808|RIPK1	REV__ENSG00000137275|ENST00000259808|RIPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2634582519531	2	438.264136	874.51372	-1.5833	-0.00069392	-0.15448	-6.7702E-05	-1.7378	-0.00076162	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.86288	1	2063	2063		26.796	6.3143	1	11160000	+		20481	19375	13857	13867	23640	23640					0.07144347919654592
KHIVGKGH	8	Unmodified	_KHIVGKGH_					0	0	0			REV__ENSG00000137275|ENST00000259808|RIPK1	REV__ENSG00000137275|ENST00000259808|RIPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2629089355469	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.86288	1	2938	2938		26.796	2.5934	1	22924000	+		20482	19375	13857	13867	23641	23641					0.07144347919654592
KHIVGKGH	8	Unmodified	_KHIVGKGH_					0	0	0			REV__ENSG00000137275|ENST00000259808|RIPK1	REV__ENSG00000137275|ENST00000259808|RIPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2632751464844	2	438.264136	874.51372	0.15263	6.689E-05	-1.9074	-0.00083592	-1.7547	-0.00076903	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.85277	1	2037	2037		25.45	1.2474	1	11370000	+		20483	19375	13857	13867	23642	23642					0.07144347919654592
KHIVGKGH	8	Unmodified	_KHIVGKGH_					0	0	0			REV__ENSG00000137275|ENST00000259808|RIPK1	REV__ENSG00000137275|ENST00000259808|RIPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2632751464844	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.86791	1	2900	2900		28.254	7.7724	1	22029000	+		20484	19375	13857	13867	23643	23643					0.07144347919654592
KHIVIFALR	9	Unmodified	_KHIVIFALR_					0	0	0		ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.8543701171875	2	548.853119	1095.69168	-0.066404	-3.6446E-05	0.15147	8.3138E-05	0.085071	4.6692E-05	548.8533089516226	44.549	0.45901	44.545	44.201	44.66	-0.0041618					17	10	2	0	0	0	0.7932	1	3503	3503		17.365	1.7232	1	82705			20485	8983	13858	13868	23644	23644					0.14766598118831098
KHKASLAKE	9	Unmodified	_KHKASLAKE_					0	0	0			REV__ENSG00000198042|ENST00000360128|MAK16	REV__ENSG00000198042|ENST00000360128|MAK16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3011169433594	2	506.300916	1010.58728	-1.5945	-0.00080728	1.9293	0.00097679	0.33481	0.00016952	506.30185711798276	96.376	1.2072	96.579	96.02	97.227	0.20241					70	27	3	0	0	0	0.7932	1	9870	9870		24.519	0.015177	1	332450	+		20486	23291	13859	13869	23645	23645					0.0824085157147465
KHKHRKPT	8	Unmodified	_KHKHRKPT_					0	0	0		ENSG00000085185|ENST00000540052|BCORL1;nc|ENSG00000085185|Q5H9F3-1|BCORL1;nc|ENSG00000085185|Q5H9F3-4|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3111572265625	2	516.314692	1030.61483	0.96653	0.00049903	-2.4662	-0.0012733	-1.4997	-0.00077431	516.3133887311924	32.644	2.0073	32.856	32.593	34.6	0.21168					79	47	2	0	0	0	0.89962	1	2315	2315		38.806	3.1879	1	535970			20487	1527	13860	13870	23646	23646					0.10074799622361752
KHKKHKHR	8	Unmodified	_KHKKHKHR_					0	0	0		ENSG00000273559|ENST00000614790|CWC25	ENSG00000273559|ENST00000614790|CWC25	ENSG00000273559|ENST00000614790|CWC25	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.8427734375	2	549.841408	1097.66826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.393	1	73.477	72.977	73.977	0.083138								0	0	0	0.29452	1	6739	6739		33.516	2.9467	1				20488	8987	13861	13871	23647	23647					0.12333597124893458
KHKKPPSS	8	Unmodified	_KHKKPPSS_					0	0	0			REV__ENST00000512416.5_1_17:48625445-48625815:+|nuORF	REV__ENST00000512416.5_1_17:48625445-48625815:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.5880126953125	2	454.769252	907.52395	-0.2198	-9.996E-05	0.77786	0.00035375	0.55806	0.00025379	454.7692788440171	24.56	0.94002	24.232	23.673	24.613	-0.32825					27	20	2	0	0	0	0.4196	1	1130	1130		16.473	0	1	76613	+		20489	27837	13862	13872	23648	23648					0.06648910854232781
KHKKRKPSSA	10	Unmodified	_KHKKRKPSSA_					0	0	0		ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.8583984375	2	583.859464	1165.70437	-0.018036	-1.053E-05	-0.86778	-0.00050666	-0.88582	-0.00051719	583.8586981991532	98.483	2.4194	98.532	98.099	100.52	0.048157					136	55	4	0	0	0	0.86718	1	10547	10547		27.882	1.1893	1	1823400			20490	8422	13863	13873	23649	23649					0.12815009511086828
KHKKVVKGEKD	11	Unmodified	_KHKKVVKGEKD_					0	0	0			REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3931884765625	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.79294	1	12815	12815		12.812	1.9462	1	2297700	+		20491	21391	13864	13874	23650	23650					0.13652414651210165
KHKKVYLGY	9	Unmodified	_KHKKVYLGY_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8963623046875	2	568.334759	1134.65496	0.24567	0.00013962	-2.6724	-0.0015188	-2.4267	-0.0013792	568.8346643930622	31.613	0.085304	31.724	31.646	31.732	0.11117					6	3	2	0	0	0	0.20789	1	1455	1455		23.042	1.3402	1	46504			20492	11046	13865	13875	23651	23651					0.09302301502270893
KHKLISVAEKT	11	Unmodified	_KHKLISVAEKT_					0	0	0			REV__nc|ENSG00000204644|Q9NU63|ZFP57	REV__nc|ENSG00000204644|Q9NU63|ZFP57	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3834228515625	2	627.382437	1252.75032	-0.21917	-0.0001375	0.84427	0.00052968	0.6251	0.00039218	627.3827536710313	113.14	0.55793	113.07	112.73	113.28	-0.067215					52	23	3	0	0	0	0.70737	1	12290	12290		30.318	10.321	1	140420	+		20493	23514	13866	13876	23652	23652					0.1340560990265658
KHKLISVAEKT	11	Unmodified	_KHKLISVAEKT_					0	0	0			REV__nc|ENSG00000204644|Q9NU63|ZFP57	REV__nc|ENSG00000204644|Q9NU63|ZFP57	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3836669921875	2	627.382437	1252.75032	-0.21854	-0.00013711	0.33099	0.00020765	0.11244	7.0546E-05	627.3824987700403	117.62	0.3381	117.55	117.34	117.68	-0.07531					36	11	4	0	0	0	0.65746	2	12610	12601;12610		37.812	6.2817	1	1514200	+		20494	23514	13866	13876	23653;23654	23654					0.1340560990265658
KHKLISVAEKT	11	Unmodified	_KHKLISVAEKT_					0	0	0			REV__nc|ENSG00000204644|Q9NU63|ZFP57	REV__nc|ENSG00000204644|Q9NU63|ZFP57	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.38427734375	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.67778	9	12337	12337;12444;12467;12606;12812;12991;13075;13084;13192		35.152	8.1047	1	19815000	+		20495	23514	13866	13876	23655;23656;23657;23658;23659;23660;23661;23662;23663	23655					0.1340560990265658
KHKLISVAEKT	11	Unmodified	_KHKLISVAEKT_					0	0	0			REV__nc|ENSG00000204644|Q9NU63|ZFP57	REV__nc|ENSG00000204644|Q9NU63|ZFP57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3831787109375	2	627.382437	1252.75032	-1.2002	-0.000753	1.3364	0.00083845	0.1362	8.5448E-05	627.3830182520044	111.13	0.69723	111.12	110.53	111.23	-0.0074387					64	27	3	0	0	0	0.66009	1	11844	11844		37.508	4.6958	1	327620	+		20496	23514	13866	13876	23664	23664					0.1340560990265658
KHKLISVAEKT	11	Unmodified	_KHKLISVAEKT_					0	0	0			REV__nc|ENSG00000204644|Q9NU63|ZFP57	REV__nc|ENSG00000204644|Q9NU63|ZFP57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3857421875	2	627.382437	1252.75032	-1.2001	-0.00075294	0.60915	0.00038217	-0.59097	-0.00037077	627.3827611804128	112.09	1.416	112.07	111.56	112.98	-0.01989					130	45	4	0	0	0	0.70737	2	12025	12025;12054		30.318	4.7437	1	42384000	+		20497	23514	13866	13876	23665;23666	23665					0.1340560990265658
KHKLISVAEKT	11	Unmodified	_KHKLISVAEKT_					0	0	0			REV__nc|ENSG00000204644|Q9NU63|ZFP57	REV__nc|ENSG00000204644|Q9NU63|ZFP57	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3829956054688	2	627.382437	1252.75032	2.3057	0.0014466	-2.6415	-0.0016572	-0.33579	-0.00021067	627.3803631374124	110.82	0.68079	110.87	110.56	111.24	0.054062					56	23	3	0	0	0	0.70737	2	13443	13443;13451		30.318	4.2543	1	353100	+		20498	23514	13866	13876	23667;23668	23667					0.1340560990265658
KHKLISVAEKT	11	Unmodified	_KHKLISVAEKT_					0	0	0			REV__nc|ENSG00000204644|Q9NU63|ZFP57	REV__nc|ENSG00000204644|Q9NU63|ZFP57	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3839111328125	2	627.382437	1252.75032	2.3056	0.0014465	-2.8861	-0.0018107	-0.58047	-0.00036418	627.3803712370747	111.61	0.69481	111.65	111.16	111.85	0.041832					78	24	4	0	0	0	0.7144	1	13459	13459		29.17	7.4843	1	19059000	+		20499	23514	13866	13876	23669	23669					0.1340560990265658
KHKLWFFV	8	Unmodified	_KHKLWFFV_					0	0	0			REV__ENSG00000185899|ENST00000332690|TAS2R60	REV__ENSG00000185899|ENST00000332690|TAS2R60	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.4050903320312	2	552.821287	1103.62802	1.2475	0.00068966	-2.1958	-0.0012139	-0.94831	-0.00052424	553.3209629547683	100.54	1.227	100.84	99.983	101.21	0.2999					44	30	2	0	0	0	0.4196	1	12056	12056		28.254	0	1	445820	+		20500	22802	13867	13877	23670	23670					0.08035237681724539
KHKTIHTG	8	Unmodified	_KHKTIHTG_					0	0	0		nc|ENSG00000197124|O95780-2|ZNF682;nc|ENSG00000197124|O95780-3|ZNF682;ENSG00000197124|ENST00000397165|ZNF682;ENSG00000186777|ENST00000419098|ZNF732;nc|ENSG00000167232|Q05481-2|ZNF91;ENSG00000167232|ENST00000300619|ZNF91	nc|ENSG00000197124|O95780-2|ZNF682	nc|ENSG00000197124|O95780-2|ZNF682	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.2658996582031	2	461.266876	920.519199	1.0599	0.00048891	-2.1014	-0.0009693	-1.0414	-0.00048039	461.26571035680024	34.532	0.84367	34.837	34.406	35.25	0.30494					35	20	3	0	0	0	0.92973	1	2587	2587		50.025	5.4935	1	553530			20501	6280	13868	13878	23671	23671					0.055760267114806084
KHKTKKKKNK	10	Unmodified	_KHKTKKKKNK_					0	0	0		ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.2813720703125	3	423.282218	1266.82482	0.012698	5.3747E-06	-1.7432	-0.00073785	-1.7305	-0.00073247	423.2813338006029	15.906	0.33284	15.965	15.772	16.105	0.059268					20	11	3	0	0	0	0.85086	1	90	90		19.263	4.569	1	117560			20502	7992	13869	13879	23672	23672					0.20208417504704812
KHKTKKKKNK	10	Unmodified	_KHKTKKKKNK_					0	0	0		ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	423.282218	1266.82482	-1.8668	-0.0007902	-0.018801	-7.9582E-06	-1.8856	-0.00079815	423.28219373226824	15.869	0.31949	15.917	15.733	16.053	0.047803	-0.013923	0.0014822	NaN	19.263	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116150			20503	7992	13869	13879							0.20208417504704812
KHKTKKKKNK	10	Unmodified	_KHKTKKKKNK_					0	0	0		ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	423.282218	1266.82482	0.51445	0.00021776	-2.6308	-0.0011136	-2.1164	-0.00089582	423.2812011056392	15.934	0.39123	15.91	15.72	16.111	-0.024034	-0.020799	-0.0018346	NaN	19.263	32	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142440			20504	7992	13869	13879							0.20208417504704812
KHKVIHTGEKH	11	Unmodified	_KHKVIHTGEKH_					0	0	0		ENSG00000269067|ENST00000594710|ZNF728	ENSG00000269067|ENST00000594710|ZNF728	ENSG00000269067|ENST00000594710|ZNF728	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.5858154296875	3	438.586077	1312.7364	-0.31812	-0.00013952	-0.42908	-0.00018819	-0.7472	-0.00032771	438.58583203796974	32.135	1.0839	32.084	31.686	32.77	-0.051033					43	23	2	0	0	0	0.75457	1	1886	1886		21.032	0	1	448770			20505	8966	13870	13880	23673	23673					0.09254377194224617
KHKVLMVRGF	10	Unmodified	_KHKVLMVRGF_					0	0	0			REV__chr1:84165013-84175033|17|12.88|0.41|4.98|+|ENST00000413538|PRKACB,PRKACB	REV__chr1:84165013-84175033|17|12.88|0.41|4.98|+|ENST00000413538|PRKACB,PRKACB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2442932128906	3	405.577866	1213.71177	0.91157	0.00036971	2.4135	0.00097886	3.3251	0.0013486	405.57880777706754	19.384	0.30846	19.458	19.268	19.576	0.073465					13	9	2	0	0	0	0.37624	1	398	398		17.468	5.8321	1	9869	+		20506	15457	13871	13881	23674	23674					0.11346025787156577
KHKVLMVRGF	10	Unmodified	_KHKVLMVRGF_					0	0	0			REV__chr1:84165013-84175033|17|12.88|0.41|4.98|+|ENST00000413538|PRKACB,PRKACB	REV__chr1:84165013-84175033|17|12.88|0.41|4.98|+|ENST00000413538|PRKACB,PRKACB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	405.577866	1213.71177	-0.40048	-0.00016242	3.4254	0.0013893	3.0249	0.0012268	405.57913130426635	19.672	0.25516	19.599	19.469	19.724	-0.073702	0.070389	0.00068603	NaN	17.468	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18027	+		20507	15457	13871	13881							0.11346025787156577
KHKYKSVI	8	Unmodified	_KHKYKSVI_					0	0	0			REV__ENSG00000114439|ENST00000325805|BBX	REV__ENSG00000114439|ENST00000325805|BBX	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2903747558594	2	501.808377	1001.6022	0.66884	0.00033563	-2.1596	-0.0010837	-1.4908	-0.00074807	501.8066133004357	85.743	0.13004	85.892	85.814	85.944	0.14857					4	2	2	0	0	0	0.4196	1	8402	8402		13.775	0	1	14441	+		20508	18048	13872	13882	23675	23675					0.10146343439475913
KHLAGKSTVQ	10	Unmodified	_KHLAGKSTVQ_					0	0	0			REV__nc|ENSG00000159267|P50747|HLCS	REV__nc|ENSG00000159267|P50747|HLCS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.3348388671875	2	534.811648	1067.60874	-0.61935	-0.00033124	3.8829	0.0020766	3.2636	0.0017454	534.8135587138994	45.861	0.40623	46.332	46.09	46.496	0.4714					16	9	2	0	0	0	0.37624	1	4277	4277		21.686	0	1	406600	+		20509	20650	13873	13883	23676	23676					0.07764236600178265
KHLEKLLKMA	10	Unmodified	_KHLEKLLKMA_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.87255859375	2	605.870651	1209.72675	-0.46872	-0.00028398	2.8399	0.0017206	2.3711	0.0014366	605.8722201329331	100.48	2.0532	100.52	100	102.06	0.039742					113	47	4	0	0	0	0.86763	1	10701	10701		26.693	3.1702	1	1745000	+		20510	23882	13874	13884	23677	23677					0.13027472864496303
KHLIIKRPE	9	Unmodified	_KHLIIKRPE_					0	0	0			REV__nc|ENSG00000082458|Q92796-2|DLG3	REV__nc|ENSG00000082458|Q92796-2|DLG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3626708984375	2	567.361308	1132.70806	0.39672	0.00022508	3.6187	0.0020531	4.0154	0.0022782	567.363221347754	44.24	2.8558	44.249	42.808	45.664	0.0084534					165	70	4	0	0	0	0.72402	2	3089	3089;3196		38.806	9.5567	1	1167000	+		20511	16840	13875	13885	23678;23679	23678					0.14701679284939928
KHLIIKRPE	9	Unmodified	_KHLIIKRPE_					0	0	0			REV__nc|ENSG00000082458|Q92796-2|DLG3	REV__nc|ENSG00000082458|Q92796-2|DLG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.363525390625	2	567.361308	1132.70806	0.36025	0.00020439	3.7236	0.0021126	4.0839	0.002317	567.3632714206227	44.36	2.296	44.409	43.67	45.966	0.048996					151	56	4	0	0	0	0.77546	1	3102	3102		31.955	9.995	1	1558100	+		20512	16840	13875	13885	23680	23680					0.14701679284939928
KHLIIKRPE	9	Unmodified	_KHLIIKRPE_					0	0	0			REV__nc|ENSG00000082458|Q92796-2|DLG3	REV__nc|ENSG00000082458|Q92796-2|DLG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.36328125	2	567.361308	1132.70806	0.15466	8.7749E-05	3.9039	0.0022149	4.0585	0.0023027	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.74721	1	3132	3132		37.159	1.5408	1	1937600	+		20513	16840	13875	13885	23681	23681					0.14701679284939928
KHLIIKRPE	9	Unmodified	_KHLIIKRPE_					0	0	0			REV__nc|ENSG00000082458|Q92796-2|DLG3	REV__nc|ENSG00000082458|Q92796-2|DLG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3624267578125	2	567.361308	1132.70806	-0.94241	-0.00053469	4.2694	0.0024223	3.327	0.0018876	567.3637060270148	42.168	1.9304	42.865	42.418	44.348	0.69754					144	47	5	0	0	0	0.74721	2	3723	3723;3757		37.159	10.466	1	16501000	+		20514	16840	13875	13885	23682;23683	23682					0.14701679284939928
KHLKQALAS	9	Unmodified	_KHLKQALAS_					0	0	0		nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.30242919921875	2	498.303458	994.592364	-0.84093	-0.00041904	0.4411	0.0002198	-0.39983	-0.00019923	498.3034939638698	32.085	0.68452	32.211	31.775	32.459	0.12643					32	15	3	0	0	0	0.64922	1	2200	2200		44.117	3.3386	1	298100			20515	2532	13876	13886	23684	23684					0.09485155434072112
KHLLQKTSIQ	10	Unmodified	_KHLLQKTSIQ_					0	0	0			REV__ENSG00000083857|ENST00000441802|FAT1	REV__ENSG00000083857|ENST00000441802|FAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.8562622070312	2	598.361505	1194.70846	-0.10487	-6.275E-05	-3.7081	-0.0022188	-3.8129	-0.0022815	598.3593234657415	94.339	4.754	94.774	93.51	98.264	0.43539					199	117	2	0	0	0	0.8608	1	11155	11155		34.173	2.2177	1	27641000	+		20516	16864	13877	13887	23685	23685					0.11889054214134376
KHLLRGNKAN	10	Unmodified	_KHLLRGNKAN_					0	0	0		chr14:30700258-30734790|13|15.15|0.05|8.17|+|1|SCFD1,SCFD1|2	chr14:30700258-30734790|13|15.15|0.05|8.17|+|1|SCFD1,SCFD1|2	chr14:30700258-30734790|13|15.15|0.05|8.17|+|1|SCFD1,SCFD1|2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8429565429688	2	575.843813	1149.67307	-0.49921	-0.00028747	-0.94267	-0.00054283	-1.4419	-0.0008303	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.86589	1	8864	8864		29.15	3.6994	1	1518700			20517	166	13878	13888	23686	23686					0.10422436476983421
KHLPPGAR	8	Unmodified	_KHLPPGAR_					0	0	0			REV__nc|ENSG00000185252|Q16587-4|ZNF74	REV__nc|ENSG00000185252|Q16587-4|ZNF74	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633972167969	2	438.264136	874.51372	-1.0936	-0.00047928	-0.34853	-0.00015275	-1.4421	-0.00063203	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.87479	1	2554	2554		30.504	3.8107	1	2862500	+		20518	27340	13879	13889	23687	23687					0.07144347919654592
KHLPPGAR	8	Unmodified	_KHLPPGAR_					0	0	0			REV__nc|ENSG00000185252|Q16587-4|ZNF74	REV__nc|ENSG00000185252|Q16587-4|ZNF74	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2647705078125	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.84341	1	3391	3391		24.203	3.7209	1	4268300	+		20519	27340	13879	13889	23688	23688					0.07144347919654592
KHLPPGAR	8	Unmodified	_KHLPPGAR_					0	0	0			REV__nc|ENSG00000185252|Q16587-4|ZNF74	REV__nc|ENSG00000185252|Q16587-4|ZNF74	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2624816894531	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.84341	2	2739	2739;2887		24.203	4.8428	1	22924000	+		20520	27340	13879	13889	23689;23690	23689					0.07144347919654592
KHLPPGAR	8	Unmodified	_KHLPPGAR_					0	0	0			REV__nc|ENSG00000185252|Q16587-4|ZNF74	REV__nc|ENSG00000185252|Q16587-4|ZNF74	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2634582519531	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.84341	1	2810	2810		24.203	2.2429	1	21381000	+		20521	27340	13879	13889	23691	23691					0.07144347919654592
KHLSETSTLKE	11	Unmodified	_KHLSETSTLKE_					0	0	0		ENSG00000177453|ENST00000326035|NIM1K	ENSG00000177453|ENST00000326035|NIM1K	ENSG00000177453|ENST00000326035|NIM1K	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.89666748046875	3	424.897987	1271.67213	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.091	1	18.167	17.667	18.667	0.075441								0	0	0	0.56276	1	250	250		24.276	0.04411	1				20522	7140	13880	13890	23692	23692					0.04716132526732508
KHLTRSALLL	10	Unmodified	_KHLTRSALLL_					0	0	0		nc|ENSG00000198431|Q16881-3|TXNRD1	nc|ENSG00000198431|Q16881-3|TXNRD1	nc|ENSG00000198431|Q16881-3|TXNRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3681030273438	2	576.36659	1150.71863	0.38706	0.00022309	4.0536	0.0023364	4.4407	0.0025595	576.3687857053872	46.409	2.2039	46.447	45.362	47.565	0.038181					117	60	3	0	0	0	0.8505	1	3423	3423		19.104	0.84144	1	342020			20523	15199	13881	13891	23693	23693					0.14929661939368088
KHMPPLKPK	9	Unmodified	_KHMPPLKPK_					0	0	0		nc|ENSG00000124782|Q92766-5|RREB1;nc|ENSG00000124782|Q92766-3|RREB1;nc|ENSG00000124782|Q92766|RREB1;ENSG00000124782|ENST00000379938|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.327392578125	2	538.325879	1074.63721	-0.15628	-8.4129E-05	2.8894	0.0015554	2.7331	0.0014713	538.3273734998361	103.57	1.2288	103.57	103.11	104.34	-0.0016403					90	29	4	0	0	0	0.76255	2	11160	11099;11160		35.618	4.0885	1	1025700			20524	3359	13882	13892	23694;23695	23695					0.10287262975771228
KHMPPLKPK	9	Unmodified	_KHMPPLKPK_					0	0	0		nc|ENSG00000124782|Q92766-5|RREB1;nc|ENSG00000124782|Q92766-3|RREB1;nc|ENSG00000124782|Q92766|RREB1;ENSG00000124782|ENST00000379938|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3270874023438	2	538.325879	1074.63721	1.246	0.00067074	1.4905	0.00080239	2.7365	0.0014731	538.3266661650491	104.62	1.1683	104.66	104.04	105.21	0.039856					83	27	4	0	0	0	0.78536	1	11421	11421		29.15	0	1	814780			20525	3359	13882	13892	23696	23696					0.10287262975771228
KHMPPLKPK	9	Unmodified	_KHMPPLKPK_					0	0	0		nc|ENSG00000124782|Q92766-5|RREB1;nc|ENSG00000124782|Q92766-3|RREB1;nc|ENSG00000124782|Q92766|RREB1;ENSG00000124782|ENST00000379938|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3264770507812	2	538.325879	1074.63721	0.070634	3.8024E-05	1.6375	0.00088148	1.7081	0.00091951	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.76255	1	10591	10591		35.618	3.6634	1	109840000			20526	3359	13882	13892	23697	23697					0.10287262975771228
KHMPPLKPK	9	Unmodified	_KHMPPLKPK_					0	0	0		nc|ENSG00000124782|Q92766-5|RREB1;nc|ENSG00000124782|Q92766-3|RREB1;nc|ENSG00000124782|Q92766|RREB1;ENSG00000124782|ENST00000379938|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3270263671875	2	538.325879	1074.63721	-1.4902	-0.0008022	4.1746	0.0022473	2.6844	0.0014451	538.3280364010775	103.36	1.0546	103.48	103.07	104.12	0.11495					72	26	3	0	0	0	0.78536	1	10875	10875		29.15	2.4566	1	1412200			20527	3359	13882	13892	23698	23698					0.10287262975771228
KHMPPLKPK	9	Unmodified	_KHMPPLKPK_					0	0	0		nc|ENSG00000124782|Q92766-5|RREB1;nc|ENSG00000124782|Q92766-3|RREB1;nc|ENSG00000124782|Q92766|RREB1;ENSG00000124782|ENST00000379938|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3265991210938	2	538.325879	1074.63721	1.3454	0.00072427	0.53716	0.00028916	1.8826	0.0010134	538.3260218082069	100.6	2.6544	100.9	100.26	102.91	0.2999					222	70	6	0	0	0	0.78536	3	12322	12264;12271;12322		29.15	3.6795	1	18713000			20528	3359	13882	13892	23699;23700;23701	23701					0.10287262975771228
KHMRTNKKGIL	11	Unmodified	_KHMRTNKKGIL_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.6009826660156	3	442.599329	1324.77616	-0.15208	-6.7312E-05	4.0214	0.0017798	3.8693	0.0017125	442.6010716654733	103.97	1.4842	103.96	103.51	105	-0.0035706					84	35	4	0	0	0	0.77511	1	11238	11238		16.53	1.1924	1	603650	+		20529	23015	13883	13893	23702	23702					0.12676180873268095
KHMTELAVLN	10	Unmodified	_KHMTELAVLN_					0	0	0			REV__nc|ENSG00000198718|Q9Y4F4|TOGARAM1	REV__nc|ENSG00000198718|Q9Y4F4|TOGARAM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3101806640625	2	578.313166	1154.61178	-0.30541	-0.00017662	-4.1751	-0.0024145	-4.4805	-0.0025911	578.3105993918314	110.37	1.6265	110.37	110.02	111.65	0					155	51	5	0	0	0	0.78666	1	11527	11527		40.058	3.6114	1	2787700	+		20530	23361	13884	13894	23703	23703					0.04065743662704335
KHMYKKLFES	10	Unmodified	_KHMYKKLFES_					0	0	0			REV__ENSG00000101230|ENST00000262487|ISM1	REV__ENSG00000101230|ENST00000262487|ISM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.9052429199219	3	437.569036	1309.68528	0.14053	6.1493E-05	2.0704	0.00090594	2.2109	0.00096743	437.569795972988	34.491	0.53151	34.6	34.322	34.853	0.10829					55	23	3	0	0	0	0.86225	1	1741	1741		32.751	2.1817	1	195820	+		20531	17259	13885	13895	23704	23704					0.042822921051310914
KHPANLILIYG	11	Unmodified	_KHPANLILIYG_					0	0	0		ENSG00000016402|ENST00000316649|IL20RA;nc|ENSG00000016402|Q9UHF4-2|IL20RA;nc|ENSG00000016402|Q9UHF4-3|IL20RA	ENSG00000016402|ENST00000316649|IL20RA	ENSG00000016402|ENST00000316649|IL20RA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.869140625	2	619.866423	1237.71829	1.2588	0.00078029	3.961	0.0024553	5.2198	0.0032356	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.71452	1	11410	11410		29.15	2.1022	1	4742500			20532	827	13886	13896	23705	23705					0.1089424221952413
KHPEDVQS	8	Unmodified	_KHPEDVQS_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.84796142578125	2	470.230156	938.445759	-0.5895	-0.0002772	0.82529	0.00038808	0.23579	0.00011088	470.2304404672262	21.106	0.55865	20.478	20.162	20.721	-0.62834					29	14	3	0	0	0	0.4196	1	717	717		23.042	6.5693	1	86765			20533	6039	13887	13897	23706	23706					-0.025925665216618654
KHPGPGSVTLQ	11	Unmodified	_KHPGPGSVTLQ_					0	0	0		ENST00000403710.5_1_22:19949762-19949933:+|nuORF	ENST00000403710.5_1_22:19949762-19949933:+|nuORF	ENST00000403710.5_1_22:19949762-19949933:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8084716796875	2	560.809105	1119.60366	-0.087449	-4.9042E-05	0.26433	0.00014824	0.17688	9.9194E-05	560.8091081677871	31.44	0.77379	31.52	31.209	31.983	0.079836					46	17	4	0	0	0	0.14238	1	2127	2127		82.75	3.0379	1	979640			20534	11254	13888	13898	23707	23707					0.04863932737566756
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.7394104003906	2	408.739963	815.465373	-1.9297	-0.00078873	1.2966	0.00052999	-0.63302	-0.00025874	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.86288	4	2097	2097;2110;2122;2271		37.028	8.7742	1	521170	+		20535	16741	13889	13899	23708;23709;23710;23711	23708					0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.7389831542969	2	408.739963	815.465373	-0.047648	-1.9476E-05	-0.50077	-0.00020468	-0.54842	-0.00022416	408.73963408946304	36.955	2.5653	36.931	36.681	39.246	-0.023975					119	58	3	0	0	0	0.82464	1	2459	2459		21.702	0.7554	1	457600	+		20536	16741	13889	13899	23712	23712					0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.7395324707031	2	408.739963	815.465373	0.85094	0.00034781	-1.5858	-0.00064816	-0.73482	-0.00030035	408.7393373651895	37.561	2.1469	37.572	37.24	39.387	0.011173					113	49	4	0	0	0	0.88915	2	2498	2498;2571		44.531	5.5096	1	272800	+		20537	16741	13889	13899	23713;23714	23713					0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.7396545410156	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.86791	5	1845	1845;1866;1917;1967;2022		44.531	6.9464	1	1364200	+		20538	16741	13889	13899	23715;23716;23717;23718;23719	23715					0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.73944091796875	2	408.739963	815.465373	-1.9018	-0.00077735	0.37754	0.00015431	-1.5243	-0.00062304	408.7399335619607	40.321	2.4201	40.328	40.071	42.491	0.0065002					190	75	4	0	0	0	0.86791	2	2553	2541;2553		37.028	7.1869	1	4300600	+		20539	16741	13889	13899	23720;23721	23721					0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.73968505859375	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.9159	1	1858	1858		44.531	2.0566	1	1448600	+		20540	16741	13889	13899	23722	23722					0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7392272949219	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.87276	2	2106	1912;2106		46.766	6.7991	1	1654100	+		20541	16741	13889	13899	23723;23724	23724					0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.739990234375	2	408.739963	815.465373	1.5082	0.00061648	-2.0092	-0.00082126	-0.50101	-0.00020478	408.739095634202	34.891	2.006	35.101	34.812	36.818	0.21003					151	50	4	0	0	0	0.92176	1	2611	2611		46.766	2.6496	1	5089300	+		20542	16741	13889	13899	23725	23725					0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.2923889160156	2	408.739963	815.465373	-0.10512	-4.2965E-05	-0.58592	-0.00023949	-0.69104	-0.00028245	408.7393960339994	58.011	0.65227	58.406	58.043	58.695	0.39407					26	15	2	0	0	0	0.4196	1	6092	6092		14.664	6.4328	1	176590	+		20543	16741	13889	13899	23726	23726					0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.7396240234375	2	408.739963	815.465373	1.2573	0.00051389	-1.775	-0.00072553	-0.51778	-0.00021164	408.73920372763826	34.848	1.9965	35.229	34.977	36.973	0.3812					122	50	4	0	0	0	0.86791	3	2696	2684;2696;2720		46.766	7.9603	1	5754800	+		20544	16741	13889	13899	23727;23728;23729	23728					0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	408.739963	815.465373	1.414	0.00057795	-2.1811	-0.00089152	-0.76715	-0.00031357	408.73898930884167	37.008	0.94437	37.29	36.849	37.793	0.28173	-0.10125	-0.0012205	NaN	44.531	39	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99023	+		20545	16741	13889	13899							0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	408.739963	815.465373	-0.61258	-0.00025038	-0.53146	-0.00021723	-1.144	-0.00046761	408.7395986221214	39.981	0.43583	40.349	40.151	40.587	0.36797	0.016591	-0.00098826	NaN	37.028	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	184840	+		20546	16741	13889	13899							0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	408.739963	815.465373	0.2818	0.00011518	-1.3888	-0.00056765	-1.107	-0.00045247	408.7392459946231	57.836	0.64265	58.39	58.114	58.757	0.55323	-0.0079634	-0.00027085	NaN	14.664	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	230610	+		20547	16741	13889	13899							0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	408.739963	815.465373	0.89287	0.00036495	-1.4686	-0.00060029	-0.57575	-0.00023533	408.73928594049517	36.86	1.2432	37.345	36.704	37.947	0.48581	-0.045323	-0.00063806	NaN	44.531	44	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104100	+		20548	16741	13889	13899							0.0502585427974509
KHPPALGP	8	Unmodified	_KHPPALGP_					0	0	0			REV__nc|ENSG00000077254|Q8TEY7-3|USP33	REV__nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	408.739963	815.465373	-1.4395	-0.00058839	3.8307	0.0015657	2.3911	0.00097735	408.73965454542633	39.932	0.41307	40.521	40.346	40.759	0.58915	0.18903	0.0025777	NaN	37.028	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113580	+		20549	16741	13889	13899							0.0502585427974509
KHPRTSGG	8	Unmodified	_KHPRTSGG_					0	0	0		nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1	nc|ENSG00000100813|Q9UKV3-5|ACIN1	nc|ENSG00000100813|Q9UKV3-5|ACIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2272644042969	2	420.227751	838.440949	-0.18786	-7.8944E-05	0.38594	0.00016218	0.19808	8.324E-05	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.82658	1	7331	7331		21.96	0	1	279000			20550	14818	13890	13900	23730	23730					0.015265941262441629
KHQLKLERFRS	11	Unmodified	_KHQLKLERFRS_					0	0	0			REV__ENST00000555483.5_1_14:64699857-64724116:-|nuORF	REV__ENST00000555483.5_1_14:64699857-64724116:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.2820739746094	3	481.284398	1440.83137	-0.094123	-4.53E-05	-2.6237	-0.0012628	-2.7178	-0.0013081	481.28309921299575	101.72	1.6724	101.74	100.69	102.36	0.01989					105	39	3	0	0	0	0.74771	1	10914	10914		22.562	3.2989	1	543600	+		20551	19590	13891	13901	23731	23731					0.12858310665387762
KHQLVVRRDY	10	Unmodified	_KHQLVVRRDY_					0	0	0		nc|ENSG00000107447|P04053-2|DNTT;ENSG00000107447|ENST00000371174|DNTT	nc|ENSG00000107447|P04053-2|DNTT	nc|ENSG00000107447|P04053-2|DNTT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.5856628417969	3	438.586077	1312.7364	0.62249	0.00027302	-1.9093	-0.00083741	-1.2868	-0.00056439	438.58531704685663	31.503	0.98428	31.61	31.29	32.274	0.10707					45	22	3	0	0	0	0.86225	1	2135	2135		32.751	2.1817	1	2540100			20552	2346	13892	13902	23732	23732					0.09254377194247354
KHQRLLFP	8	Unmodified	_KHQRLLFP_					0	0	0			REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8202514648438	2	519.813993	1037.61343	-0.12713	-6.6084E-05	3.2257	0.0016768	3.0985	0.0016107	520.3175808258476	52.926	0.45551	53.54	53.2	53.655	0.61436					15	10	2	0	0	0	0.4196	1	5352	5352		35.201	15.841	1	78288	+		20553	18554	13893	13903	23733	23733					0.09613165533619394
KHRILCSL	8	Unmodified	_KHRILCSL_					0	0	0			REV__ENSG00000196350|ENST00000601693|ZNF729	REV__ENSG00000196350|ENST00000601693|ZNF729	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2876281738281	2	485.286754	968.558955	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.016	1	15.418	14.918	15.918	-0.59873								0	0	0	0.29344	1	77	77		31.955	0	1		+		20554	23117	13894	13904	23734	23734					0.07341830390521409
KHRIVKKLVGG	11	Unmodified	_KHRIVKKLVGG_					0	0	0			REV__nc|ENSG00000041982|P24821-3|TNC	REV__nc|ENSG00000041982|P24821-3|TNC	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.237548828125	3	412.275063	1233.80336	-1.6118	-0.00066451	-2.1901	-0.00090291	-3.8019	-0.0015674	412.2739747222502	79.46	0.30099	79.559	79.317	79.618	0.098701					11	9	2	0	0	0	0.18164	1	7478	7478		10.587	3.9272	1	37166	+		20555	16324	13895	13905	23735	23735					0.19581032475957727
KHRLHKTP	8	Unmodified	_KHRLHKTP_					0	0	0		ENST00000314728.9_1_17:19237570-19238089:+|nuORF	ENST00000314728.9_1_17:19237570-19238089:+|nuORF	ENST00000314728.9_1_17:19237570-19238089:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.80419921875	2	508.809242	1015.60393	0.33751	0.00017173	-3.3887	-0.0017242	-3.0512	-0.0015525	508.8074006535315	89.921	1.4701	89.969	89.439	90.909	0.048157					61	34	2	0	0	0	0.87064	1	9272	9272		29.15	4.6304	1	1159300			20556	9965	13896	13906	23736	23736					0.09675397248076933
KHRLHKTP	8	Unmodified	_KHRLHKTP_					0	0	0		ENST00000314728.9_1_17:19237570-19238089:+|nuORF	ENST00000314728.9_1_17:19237570-19238089:+|nuORF	ENST00000314728.9_1_17:19237570-19238089:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.80511474609375	2	508.809242	1015.60393	0.71176	0.00036215	-3.7551	-0.0019106	-3.0433	-0.0015485	508.807249712291	89.741	1.2834	89.893	89.353	90.637	0.1519					55	29	2	0	0	0	0.87479	1	8949	8949		30.504	1.3541	1	1480000			20557	9965	13896	13906	23737	23737					0.09675397248076933
KHRLLYKNLH	10	Unmodified	_KHRLLYKNLH_					0	0	0			REV__nc|ENSG00000175164|P16442|ABO	REV__nc|ENSG00000175164|P16442|ABO	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7776184082031	3	441.266568	1320.77787	-0.093742	-4.1365E-05	2.9375	0.0012962	2.8438	0.0012549	441.2677973046502	53.996	2.0139	53.991	52.809	54.823	-0.0053711					110	61	3	0	0	0	0.37624	1	4831	4831		16.007	2.4988	1	169650	+		20558	22043	13897	13907	23738	23738					0.1303155795355906
KHRRFEDKV	9	Unmodified	_KHRRFEDKV_					0	0	0			REV__ENST00000489852.1_1_7:96747035-96772137:+|nuORF	REV__ENST00000489852.1_1_7:96747035-96772137:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.56439208984375	3	405.563273	1213.66799	0.092234	3.7407E-05	3.491	0.0014158	3.5833	0.0014532	405.5646064688323	59.947	1.8016	59.915	58.946	60.747	-0.031731					126	47	3	0	0	0	0.7932	1	5635	5635		22.58	7.886	1	288430	+		20559	23154	13898	13908	23739	23739					0.06970132614355862
KHRRFQNTLVV	11	Unmodified	_KHRRFQNTLVV_					0	0	0		ENSG00000198894|ENST00000361786|CIPC	ENSG00000198894|ENST00000361786|CIPC	ENSG00000198894|ENST00000361786|CIPC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.6081237792969	3	466.608993	1396.80515	0.76537	0.00035713	-2.8238	-0.0013176	-2.0584	-0.00096048	466.60758822103855	100.27	2.2686	100.42	99.189	101.46	0.15073					150	53	4	0	0	0	0.75121	1	10418	10418		21.78	2.5177	1	578170			20560	8361	13899	13909	23740	23740					0.12262041493909237
KHRRKQKTPKK	11	Unmodified	_KHRRKQKTPKK_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9752197265625	3	478.975788	1433.90553	-0.16418	-7.8638E-05	-2.5777	-0.0012346	-2.7418	-0.0013133	478.9745752615002	64.006	1.3084	63.972	63.625	64.933	-0.034252					50	35	2	0	0	0	0.18216	1	6149	6149		6.001	0	1	95082			20561	8094	13900	13910	23741	23741					0.20593698547577333
KHRRKQKTPKK	11	Unmodified	_KHRRKQKTPKK_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9739685058594	3	478.975788	1433.90553	0.32204	0.00015425	-2.7165	-0.0013011	-2.3944	-0.0011469	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.7896	1	4058	4058		13.508	3.8618	1	307830			20562	8094	13900	13910	23742	23742					0.20593698547577333
KHRRKQKTPKK	11	Unmodified	_KHRRKQKTPKK_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3206481933594	3	478.975788	1433.90553	-0.8901	-0.00042634	-1.1921	-0.00057099	-2.0822	-0.00099733	478.9751259885277	58.64	1.2116	59.193	58.597	59.809	0.55323					44	29	2	0	0	0	0.18066	1	6206	6206		19.263	0	1	197220			20563	8094	13900	13910	23743	23743					0.20593698547577333
KHRTWMKRLI	10	Unmodified	_KHRTWMKRLI_					0	0	0			REV__ENSG00000169085|ENST00000305454|VXN	REV__ENSG00000169085|ENST00000305454|VXN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7682189941406	3	456.939686	1367.79723	0.96692	0.00044182	-0.25747	-0.00011765	0.70944	0.00032417	456.93928438572215	16.159	0.18658	16.237	16.132	16.319	0.077959					9	7	2	0	0	0	0.37624	1	80	80		3.8434	0	1	27739	+		20564	21547	13901	13911	23744	23744					0.12804190972815377
KHSGLRNI	8	Unmodified	_KHSGLRNI_					0	0	0		nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7;ENSG00000083223|ENST00000375963|TUT7	nc|ENSG00000083223|Q5VYS8-4|TUT7	nc|ENSG00000083223|Q5VYS8-4|TUT7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.2158508300781	2	462.772326	923.530098	-0.40868	-0.00018912	-1.8151	-0.00083997	-2.2238	-0.0010291	462.77134502880307	49.757	0.28712	50.205	50.02	50.307	0.44761					8	6	2	0	0	0	0.4196	1	4874	4874		25.45	0	1	122290			20565	1499	13902	13912	23745	23745					0.0652742908575874
KHSIILRTQLS	11	Unmodified	_KHSIILRTQLS_					0	0	0		nc|ENSG00000134775|Q2V2M9-2|FHOD3;nc|ENSG00000134775|Q2V2M9|FHOD3;nc|ENSG00000134775|Q2V2M9-3|FHOD3;ENSG00000134775|ENST00000590592|FHOD3;ENST00000589114.5_1_18:33877702-34289359:+|nuORF	nc|ENSG00000134775|Q2V2M9-2|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3922729492188	2	648.393336	1294.77212	-1.1413	-0.00074	0.13726	8.8996E-05	-1.004	-0.000651	648.3933115061765	106.13	0.94215	106.19	105.71	106.65	0.053757					81	22	4	0	0	0	0.72106	1	11330	11330		28.081	0	1	40329000			20566	3958	13903	13913	23746	23746					0.13652414651232903
KHSILTLKYPI	11	Unmodified	_KHSILTLKYPI_					0	0	0		ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2732238769531	3	438.271096	1311.79146	-0.15875	-6.9576E-05	4.3828	0.0019208	4.224	0.0018513	438.27291084215926	107.41	0.8759	107.38	106.95	107.82	-0.034409					90	20	5	0	0	0	0.71803	2	11657	11657;11682		28.577	2.5311	1	4015900			20567	11387	13904	13914	23747;23748	23747					0.1480337094214974
KHSILTLKYPI	11	Unmodified	_KHSILTLKYPI_					0	0	0		ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2730407714844	3	438.271096	1311.79146	2.7278	0.0011955	1.6103	0.00070576	4.3381	0.0019013	438.2717172692411	106.49	1.037	106.46	105.98	107.01	-0.034134					77	23	5	0	0	0	0.69071	3	11762	11750;11762;11810		33.039	5.3955	1	3866800			20568	11387	13904	13914	23749;23750;23751	23750					0.1480337094214974
KHSILTLKYPI	11	Unmodified	_KHSILTLKYPI_					0	0	0		ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2729187011719	3	438.271096	1311.79146	2.7278	0.0011955	1.5423	0.00067595	4.2701	0.0018715	438.27166879991887	107.29	1.1275	107.26	106.75	107.88	-0.034134					106	26	5	0	0	0	0.71803	2	11822	11822;11858		28.577	0.68632	1	5019700			20569	11387	13904	13914	23752;23753	23752					0.1480337094214974
KHSILTLKYPI	11	Unmodified	_KHSILTLKYPI_					0	0	0		ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2729797363281	3	438.271096	1311.79146	2.0592	0.0009025	2.2865	0.0010021	4.3457	0.0019046	438.27198607190746	106.29	0.8153	106.33	105.9	106.72	0.03688					74	18	5	0	0	0	0.69071	1	11630	11630		33.039	8.8076	1	4519600			20570	11387	13904	13914	23754	23754					0.1480337094214974
KHSILTLKYPI	11	Unmodified	_KHSILTLKYPI_					0	0	0		ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2728576660156	3	438.271096	1311.79146	2.0595	0.00090261	2.1338	0.00093518	4.1933	0.0018378	438.2719380139852	107.11	1.2259	107.15	106.67	107.9	0.035614					128	28	5	0	0	0	0.74771	1	11762	11762		22.562	0	1	4659700			20571	11387	13904	13914	23755	23755					0.1480337094214974
KHSILTLKYPI	11	Unmodified	_KHSILTLKYPI_					0	0	0		ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.273193359375	3	438.271096	1311.79146	0.73903	0.00032389	3.6074	0.001581	4.3464	0.0019049	438.27258626082147	106.07	0.86208	106.16	105.83	106.7	0.099007					90	20	5	0	0	0	0.74771	1	11335	11335		22.562	0.78116	1	9065500			20572	11387	13904	13914	23756	23756					0.1480337094214974
KHSILTLKYPI	11	Unmodified	_KHSILTLKYPI_					0	0	0		ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2731628417969	3	438.271096	1311.79146	0.73903	0.0003239	3.4266	0.0015018	4.1656	0.0018257	438.2725101796097	107.07	1.2292	107.16	106.69	107.92	0.091255					130	29	5	0	0	0	0.67762	3	11544	11484;11496;11544		35.178	10.052	1	4759800			20573	11387	13904	13914	23757;23758;23759	23759					0.1480337094214974
KHSILTLKYPI	11	Unmodified	_KHSILTLKYPI_					0	0	0		ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	438.271096	1311.79146	1.6553	0.00072548	2.6336	0.0011542	4.2889	0.0018797	438.2721808372331	107.17	1.1517	107.28	106.72	107.87	0.10396	0.023808	-0.0015728	NaN	35.178	80	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140930			20574	11387	13904	13914							0.1480337094214974
KHSILTLKYPI	11	Unmodified	_KHSILTLKYPI_					0	0	0		ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	438.271096	1311.79146	4.7743	0.0020924	-0.69425	-0.00030427	4.08	0.0017882	438.27074981063475	107.06	1.2581	107.21	106.66	107.92	0.14929	-0.041913	-0.0059483	NaN	35.178	88	48	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	205730			20575	11387	13904	13914							0.1480337094214974
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.353515625	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.8651	1	10777	10777		25.574	2.5316	1	61091000	+		20576	21190	13905	13915	23760	23760					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.353515625	2	582.354014	1162.69348	-0.84093	-0.00048972	-0.12395	-7.2182E-05	-0.96488	-0.0005619	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.86471	2	11303	11303;11604		30.318	1.1477	1	77752000	+		20577	21190	13905	13915	23761;23762	23761					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.352783203125	2	582.354014	1162.69348	3.1803	0.0018521	-4.2471	-0.0024733	-1.0667	-0.00062122	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.8545	1	11608	11608		36.447	2.2742	1	77008000	+		20578	21190	13905	13915	23763	23763					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3544311523438	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.18	1	113.16	112.66	113.66	-0.024811								0	0	0	0.45132	1	12519	12519		16.717	1.8525	1		+		20579	21190	13905	13915	23764	23764					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3509521484375	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.42	1	113.4	112.9	113.9	-0.024811								0	0	0	0.45132	1	12549	12549		17.468	0.99486	1		+		20580	21190	13905	13915	23765	23765					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.354736328125	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.59	1	115.56	115.06	116.06	-0.02433								0	0	0	0.45132	1	12800	12800		26.063	5.1165	1		+		20581	21190	13905	13915	23766	23766					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3530883789062	2	582.354014	1162.69348	0.15817	9.2113E-05	-1.1126	-0.00064794	-0.95444	-0.00055582	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.70553	6	11473	11196;11208;11232;11352;11437;11473		44.377	12.847	1	78004000	+		20582	21190	13905	13915	23767;23768;23769;23770;23771;23772	23772					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.354248046875	2	582.354014	1162.69348	0.16989	9.8934E-05	-0.87197	-0.0005078	-0.70208	-0.00040886	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.8505	4	12589	12340;12513;12589;12755		35.152	8.4591	1	635410	+		20583	21190	13905	13915	23773;23774;23775;23776	23775					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3536987304688	2	582.354014	1162.69348	0.72245	0.00042072	-1.6748	-0.00097534	-0.95238	-0.00055462	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.86698	1	11234	11234		28.081	0.19925	1	132960000	+		20584	21190	13905	13915	23777	23777					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3538208007812	2	582.354014	1162.69348	0.88325	0.00051437	-1.8039	-0.0010505	-0.92067	-0.00053616	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.86471	2	10978	10978;11160		30.318	2.4355	1	125340000	+		20585	21190	13905	13915	23778;23779	23778					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3532104492188	2	582.354014	1162.69348	-1.3468	-0.00078429	0.41376	0.00024096	-0.93299	-0.00054333	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.86471	2	11159	11122;11159		30.318	8.3578	1	120000000	+		20586	21190	13905	13915	23780;23781	23781					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3532104492188	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.78666	4	12189	12156;12189;12262;12309		40.058	12.176	1	3937500	+		20587	21190	13905	13915	23782;23783;23784;23785	23783					0.11863607136797327
KHSKKGTHIK	10	Unmodified	_KHSKKGTHIK_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3548583984375	2	582.354014	1162.69348	2.7406	0.001596	-3.1524	-0.0018358	-0.4118	-0.00023981	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.86698	1	12629	12629		28.081	1.0342	1	7862700	+		20588	21190	13905	13915	23786	23786					0.11863607136797327
KHSKVLRRP	9	Unmodified	_KHSKVLRRP_					0	0	0		ENST00000524227.5_1_8:41519075-41530298:-|nuORF;nc|ENSG00000029534|P16157-15|ANK1;nc|ENSG00000029534|P16157-14|ANK1	ENST00000524227.5_1_8:41519075-41530298:-|nuORF	ENST00000524227.5_1_8:41519075-41530298:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8558959960938	2	560.856724	1119.69889	1.3943	0.00078201	-3.4352	-0.0019266	-2.0409	-0.0011446	560.8547076489161	100.84	0.99243	100.89	100.52	101.51	0.046356					51	23	3	0	0	0	0.7932	1	10838	10838		14.865	0	1	359120			20589	13213	13906	13916	23787	23787					0.1438333071928355
KHSLRKVSDS	10	Unmodified	_KHSLRKVSDS_					0	0	0		ENST00000513726.5_1_4:1932463-1953839:+|nuORF	ENST00000513726.5_1_4:1932463-1953839:+|nuORF	ENST00000513726.5_1_4:1932463-1953839:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.8248291015625	2	578.825286	1155.63602	-0.93209	-0.00053952	0.4747	0.00027477	-0.45739	-0.00026475	578.8254397838805	65.358	0.41475	65.362	65.139	65.554	0.0046997					31	18	2	0	0	0	0.82886	1	6151	6151		37.812	7.4938	1	350700			20590	13059	13907	13917	23788	23788					0.06442720140557867
KHSRKKQKKKH	11	Unmodified	_KHSRKKQKKKH_					0	0	0			REV__nc|ENSG00000150776|Q6ZUT1-3|NKAPD1	REV__nc|ENSG00000150776|Q6ZUT1-3|NKAPD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.6392822265625	3	478.303904	1431.88988	-1.7989	-0.00086042	-0.21	-0.00010045	-2.0089	-0.00096087	478.3036786471485	67.172	1.202	67.201	66.753	67.955	0.02858					107	52	3	0	0	0	0.81407	1	6340	6340		8.4073	0.72786	1	286540	+		20591	20221	13908	13918	23789	23789					0.1912141203054034
KHTFHVII	8	Unmodified	_KHTFHVII_					0	0	0		ENST00000396403.8_1_19:53994954-53995710:+|nuORF	ENST00000396403.8_1_19:53994954-53995710:+|nuORF	ENST00000396403.8_1_19:53994954-53995710:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.7962951660156	2	497.795269	993.575986	-0.66885	-0.00033295	1.9666	0.00097898	1.2978	0.00064603	497.7958642477004	48.816	1.5297	48.791	47.88	49.41	-0.025112					123	35	4	0	0	0	0.81548	1	4196	4196		20.482	2.1574	1	502690			20592	11117	13909	13919	23790	23790					0.0789407426799471
KHVAVHKG	8	Unmodified	_KHVAVHKG_					0	0	0		nc|ENSG00000067646|P08048-2|ZFY;nc|ENSG00000067646|P08048-3|ZFY;ENSG00000067646|ENST00000155093|ZFY	nc|ENSG00000067646|P08048-2|ZFY	nc|ENSG00000067646|P08048-2|ZFY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633361816406	2	438.264136	874.51372	-1.0936	-0.00047928	-0.34853	-0.00015275	-1.4421	-0.00063203	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.80706	1	2831	2831		19.36	1.0356	1	2862500			20593	1186	13910	13920	23791	23791					0.07144347919654592
KHVCLKTLL	9	Unmodified	_KHVCLKTLL_					0	0	0			REV__ENSG00000099219|ENST00000339450|ERMP1	REV__ENSG00000099219|ENST00000339450|ERMP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.328125	2	527.825712	1053.63687	0.41895	0.00022113	2.3119	0.0012203	2.7308	0.0014414	528.3277425301544	55.037	1.035	55.129	54.778	55.813	0.091167					38	29	2	0	0	0	0.78983	1	4586	4586		27.882	0	1	275760	+		20594	17084	13911	13921	23792	23792					0.11219843255935302
KHVEAKVHL	9	Unmodified	_KHVEAKVHL_					0	0	0			REV__ENST00000478868.1_1_1:168054771-168056967:-|nuORF	REV__ENST00000478868.1_1_1:168054771-168056967:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8203735351562	2	530.816733	1059.61891	-0.070245	-3.7287E-05	2.0177	0.0010711	1.9475	0.0010338	531.3174969816582	84.516	1.6744	84.692	84.02	85.694	0.17561					56	38	2	0	0	0	0.76764	1	8222	8222		34.173	3.8548	1	271920	+		20595	19773	13912	13922	23793	23793					0.091488443254093
KHVEAKVHL	9	Unmodified	_KHVEAKVHL_					0	0	0			REV__ENST00000478868.1_1_1:168054771-168056967:-|nuORF	REV__ENST00000478868.1_1_1:168054771-168056967:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	530.816733	1059.61891	0.05864	3.1127E-05	6.8604	0.0036416	6.9191	0.0036728	530.8204209579749	84.198	0.80834	84.633	84.172	84.981	0.43537	-0.14145	0.0010059	NaN	34.173	23	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173330	+		20596	19773	13912	13922							0.091488443254093
KHVEAKVHL	9	Unmodified	_KHVEAKVHL_					0	0	0			REV__ENST00000478868.1_1_1:168054771-168056967:-|nuORF	REV__ENST00000478868.1_1_1:168054771-168056967:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	530.816733	1059.61891	-0.045082	-2.393E-05	5.9106	0.0031374	5.8655	0.0031135	531.3207551095782	84.344	0.80959	84.791	84.224	85.033	0.44736	0.016994	-2.5207E-06	NaN	34.173	28	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	170080	+		20597	19773	13912	13922							0.091488443254093
KHVKRKVL	8	Unmodified	_KHVKRKVL_					0	0	0		nc|ENSG00000141446|Q5FWF5-2|ESCO1;ENSG00000141446|ENST00000269214|ESCO1	nc|ENSG00000141446|Q5FWF5-2|ESCO1	nc|ENSG00000141446|Q5FWF5-2|ESCO1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3450927734375	2	504.345461	1006.67637	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.099	1	53.513	53.013	54.013	0.4139								0	0	0	0.30884	1	5348	5348		13.775	0.81615	1				20598	4500	13913	13923	23794	23794					0.17329731321649433
KHVLAASF	8	Unmodified	_KHVLAASF_					0	0	0		ENSG00000124479|ENST00000642620|NDP	ENSG00000124479|ENST00000642620|NDP	ENSG00000124479|ENST00000642620|NDP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.93359375	2	436.75307	871.491587	0.51483	0.00022485	0.27741	0.00012116	0.79224	0.00034601	436.75292757507106	20.937	0.43805	20.478	20.28	20.718	-0.4591					17	10	2	0	0	0	0.4196	1	713	713		33.516	8.0654	1	39935			20599	3333	13914	13924	23795	23795					0.05070123451230302
KHVLKIQK	8	Unmodified	_KHVLKIQK_					0	0	0		ENSG00000136937|ENST00000375147|NCBP1	ENSG00000136937|ENST00000375147|NCBP1	ENSG00000136937|ENST00000375147|NCBP1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.802001953125	2	497.332019	992.649485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.13	1	113.13	112.63	113.63	0								0	0	0	0.31173	1	11696	11696		4.6817	0	1				20600	4162	13915	13925	23796	23796					0.15286622710448228
KHVLLTRSDPN	11	Unmodified	_KHVLLTRSDPN_					0	0	0			REV__nc|ENSG00000101665|O15105-2|SMAD7	REV__nc|ENSG00000101665|O15105-2|SMAD7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3596801757812	2	640.359493	1278.70443	1.6035	0.0010268	-2.5816	-0.0016532	-0.97817	-0.00062638	640.3577368030512	99.407	2.6879	99.454	98.409	101.1	0.047531					162	62	4	0	0	0	0.67778	1	10710	10710		35.152	9.578	1	584870	+		20601	17294	13916	13926	23797	23797					0.07622964720439995
KHVLTGSA	8	Unmodified	_KHVLTGSA_					0	0	0		ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF;ENSG00000084623|ENST00000677711|EIF3I	ENST00000474371.1_1_1:32688150-32694122:+|nuORF	ENST00000474371.1_1_1:32688150-32694122:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2484130859375	2	406.734877	811.455202	3.099	0.0012605	0.34758	0.00014137	3.4465	0.0014018	406.7342652182338	88.415	0.98531	88.465	88.198	89.183	0.050407					30	23	2	0	0	0	0.4196	1	9119	9119		23.042	0	1	81990			20602	1519	13917	13927	23798	23798					0.04193246554518737
KHVRFSGQ	8	Unmodified	_KHVRFSGQ_					0	0	0			REV__ENST00000525460.5_1_1:108115955-108220600:-|nuORF	REV__ENST00000525460.5_1_1:108115955-108220600:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.75006103515625	2	479.764501	957.514448	0.69953	0.00033561	-1.8177	-0.00087209	-1.1182	-0.00053648	479.7636661930003	55.858	0.28648	56.259	56.033	56.319	0.40101					9	6	2	0	0	0	0.4196	1	5713	5713		7.6903	0	1	192250	+		20603	28185	13918	13928	23799	23799					0.03399142568719071
KHVRFSGQ	8	Unmodified	_KHVRFSGQ_					0	0	0			REV__ENST00000525460.5_1_1:108115955-108220600:-|nuORF	REV__ENST00000525460.5_1_1:108115955-108220600:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	479.764501	957.514448	-0.35775	-0.00017164	-1.7241	-0.00082716	-2.0818	-0.00099879	479.7638255768431	55.774	0.3709	56.333	56.025	56.395	0.55954	0.036933	2.6571E-05	NaN	18.324	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	241280	+		20604	28185	13918	13928							0.03399142568719071
KHVVRCYL	8	Unmodified	_KHVVRCYL_					0	0	0		ENST00000473626.1_1_2:219457053-219457431:+|nuORF;nc|ENSG00000144580|Q92600-3|CNOT9;ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9	ENST00000473626.1_1_2:219457053-219457431:+|nuORF	ENST00000473626.1_1_2:219457053-219457431:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2527770996094	2	509.286754	1016.55896	1.8015	0.00091746	-0.0085501	-4.3544E-06	1.7929	0.00091311	509.2866932744145	23.634	0.51414	23.06	22.705	23.219	-0.57415					17	11	2	0	0	0	0.4196	1	1085	1085		28.254	0	1	82299			20605	4718	13919	13929	23800	23800					0.05133830390525418
KHVVTRVQLH	10	Unmodified	_KHVVTRVQLH_					0	0	0		nc|ENSG00000001617|Q13275-2|SEMA3F;ENSG00000001617|ENST00000002829|SEMA3F	nc|ENSG00000001617|Q13275-2|SEMA3F	nc|ENSG00000001617|Q13275-2|SEMA3F	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2484130859375	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.84	1	113.82	113.32	114.32	-0.024452								0	0	0	0.45132	1	12602	12602		22.58	2.9527	1				20606	649	13920	13930	23801	23801					0.12079296028127828
KHWETTLTEG	10	Unmodified	_KHWETTLTEG_					0	0	0		nc|ENSG00000109794|A5PLN7-2|FAM149A;ENST00000515078.5_1_4:187070333-187088439:+|nuORF;nc|ENSG00000109794|A5PLN7-4|FAM149A;ENSG00000109794|ENST00000706927|FAM149A;nc|ENSG00000109794|A5PLN7|FAM149A;ENST00000514829.5_1_4:187065816-187079198:+|nuORF	nc|ENSG00000109794|A5PLN7-2|FAM149A	nc|ENSG00000109794|A5PLN7-2|FAM149A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.2991333007812	2	601.296027	1200.5775	0.17995	0.0001082	-0.26196	-0.00015751	-0.08201	-4.9312E-05	601.295771217916	28.428	0.74424	28.388	27.974	28.718	-0.039907					27	17	2	0	0	0	0.67571	1	1428	1428		45.972	1.5951	1	76153			20607	2486	13921	13931	23802	23802					-0.014763812245973895
KHWIKVAT	8	Unmodified	_KHWIKVAT_					0	0	0			REV__ENST00000256015.4_1_12:92537721-92537847:-|nuORF	REV__ENST00000256015.4_1_12:92537721-92537847:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79620361328125	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.87922	1	4695	4695		31.955	5.1588	1	2075300	+		20608	24321	13922	13932	23803	23803					0.08446074267999393
KHWKQDRIRRV	11	Unmodified	_KHWKQDRIRRV_					0	0	0			REV__ENSG00000100053|ENST00000215855|CRYBB3	REV__ENSG00000100053|ENST00000215855|CRYBB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	507.9700622558594	3	507.967292	1520.88005	0.053412	2.7132E-05	4.4574	0.0022642	4.5108	0.0022913	507.96942232393076	16.79	0.40028	16.707	16.566	16.966	-0.0821					29	16	3	0	0	0	0.8498	1	176	176		6.001	1.9181	1	58061	+		20609	17131	13923	13933	23804	23804					0.1404422402513319
KHWRHRRDFLL	11	Unmodified	_KHWRHRRDFLL_					0	0	0		ENSG00000168564|ENST00000504169|CDKN2AIP	ENSG00000168564|ENST00000504169|CDKN2AIP	ENSG00000168564|ENST00000504169|CDKN2AIP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7951049804688	3	521.963771	1562.86948	-0.54592	-0.00028495	1.6501	0.00086131	1.1042	0.00057635	522.2987301285848	58.048	0.69576	58.442	58.081	58.777	0.39407					39	16	4	0	0	0	0.18216	1	6022	6022		6.001	2.7897	1	443410			20610	6412	13924	13934	23805	23805					0.11056241370715725
KIAAYWTMNA	10	Unmodified	_KIAAYWTMNA_					0	0	0			REV__ENSG00000153246|ENST00000283243|PLA2R1	REV__ENSG00000153246|ENST00000283243|PLA2R1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	584.7894287109375	2	584.794609	1167.57467	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.82	1	113.92	113.42	114.42	0.10217								0	0	0	0.45132	1	12201	12201		19.997	0.89325	1		+		20611	20341	13925	13935	23806	23806					-0.002419278830757321
KIADRFLLY	9	Unmodified	_KIADRFLLY_					0	0	0		ENSG00000143013|ENST00000370544|LMO4	ENSG00000143013|ENST00000370544|LMO4	ENSG00000143013|ENST00000370544|LMO4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.8343505859375	2	569.834591	1137.65463	-1.0806	-0.00061575	0.86596	0.00049346	-0.21461	-0.00012229	569.8350224591633	57.613	1.7855	58.007	57.535	59.32	0.39407					132	43	5	0	0	0	0.045756	7	5971	5960;5971;5983;5996;6008;6020;6032		109.48	24.119	1	13933000			20612	4595	13926	13936	23807;23808;23809;23810;23811;23812;23813	23808					0.09130881782425604
KIADRFLLY	9	Unmodified	_KIADRFLLY_					0	0	0		ENSG00000143013|ENST00000370544|LMO4	ENSG00000143013|ENST00000370544|LMO4	ENSG00000143013|ENST00000370544|LMO4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.8344116210938	2	569.834591	1137.65463	1.1831	0.00067415	-1.2966	-0.00073884	-0.11352	-6.4686E-05	569.8337831453182	57.466	1.5319	58.021	57.642	59.174	0.55513					116	37	5	0	0	0	0.085559	5	5970	5970;5982;5994;6006;6030		96.034	22.374	1	15184000			20613	4595	13926	13936	23814;23815;23816;23817;23818	23814					0.09130881782425604
KIAKTKFKR	9	Unmodified	_KIAKTKFKR_					0	0	0		ENST00000518738.1_1_8:104061129-104063298:+|nuORF	ENST00000518738.1_1_8:104061129-104063298:+|nuORF	ENST00000518738.1_1_8:104061129-104063298:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3402709960938	2	560.371675	1118.7288	0.39531	0.00022152	2.3041	0.0012911	2.6994	0.0015127	560.3728404488676	102.47	0.41503	102.66	102.56	102.98	0.19484					12	9	2	0	0	0	0.20789	1	10806	10806		14.137	1.9303	1	126670			20614	13121	13927	13937	23819	23819					0.17418269664608488
KIALPEEVWRL	11	Unmodified	_KIALPEEVWRL_					0	0	0		ENST00000395002.6_1_4:89744147-89744438:-|nuORF	ENST00000395002.6_1_4:89744147-89744438:-|nuORF	ENST00000395002.6_1_4:89744147-89744438:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9327697753906	3	451.934484	1352.78162	-1.2127	-0.00054806	-2.8312	-0.0012795	-4.0439	-0.0018276	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.73277	1	10214	10214		25.892	8.725	1	518100			20615	11083	13928	13938	23820	23820					0.1193418293673858
KIALPSLYQT	10	Unmodified	_KIALPSLYQT_					0	0	0		ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1;ENST00000525306.1_1_11:103152943-103158366:+|nuORF	ENSG00000187240|ENST00000375735|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3302001953125	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.8545	1	9190	9190		36.447	2.5251	1	17338000			20616	7849	13929	13939	23821	23821					0.08819158199935373
KIAQTHAVLAR	11	Unmodified	_KIAQTHAVLAR_					0	0	0			REV__ENSG00000255181|ENST00000542437|CCDC166	REV__ENSG00000255181|ENST00000542437|CCDC166	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3666381835938	2	604.367121	1206.71969	-0.16822	-0.00010167	-0.91026	-0.00055013	-1.0785	-0.0006518	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.638	1	10903	10903		40.058	6.1365	1	47715000	+		20617	23894	13930	13940	23822	23822					0.12459876308275852
KIAQTHAVLAR	11	Unmodified	_KIAQTHAVLAR_					0	0	0			REV__ENSG00000255181|ENST00000542437|CCDC166	REV__ENSG00000255181|ENST00000542437|CCDC166	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2472229003906	3	403.247173	1206.71969	2.718	0.001096	-3.4576	-0.0013942	-0.73958	-0.00029823	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.72739	1	11742	11742		18.966	2.9596	1	15597000	+		20618	23894	13930	13940	23823	23823					0.12459876308275852
KIARGLNIL	9	Unmodified	_KIARGLNIL_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.7856140136719	2	499.329476	996.6444	0.16938	8.4574E-05	1.2453	0.00062183	1.4147	0.00070641	499.32966644841866	22.334	0.40987	21.916	21.652	22.062	-0.41879					12	8	2	0	0	0	0.20789	1	862	862		35.618	5.1146	1	19413	+		20619	29959	13931	13941	23824	23824					0.1459431884784408
KIARGLNIL	9	Unmodified	_KIARGLNIL_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	499.329476	996.6444	-0.65028	-0.0003247	-5.7146	-0.0028535	-6.3649	-0.0031782	499.32676502105016	21.539	0.29574	21.585	21.382	21.678	0.045399	-0.16552	-0.0025135	NaN	35.618	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44996	+		20620	29959	13931	13941							0.1459431884784408
KIARKWMRRKM	11	Unmodified	_KIARKWMRRKM_					0	0	0		nc|ENSG00000214595|Q6ZMW3-2|EML6;ENST00000490828.5_1_2:55184973-55193987:+|nuORF	nc|ENSG00000214595|Q6ZMW3-2|EML6	nc|ENSG00000214595|Q6ZMW3-2|EML6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.9674987792969	3	501.967359	1502.88025	0.21344	0.00010714	1.4405	0.00072307	1.6539	0.00083021	501.9680903121297	33.907	0.95065	34.105	33.766	34.717	0.19865					69	22	4	0	0	0	0.7896	1	2456	2456		13.508	4.2961	1	3500100			20621	15250	13932	13942	23825	23825					0.1489218442911806
KIATRYASF	9	Unmodified	_KIATRYASF_					0	0	0			REV__ENSG00000152818|ENST00000367545|UTRN	REV__ENSG00000152818|ENST00000367545|UTRN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.328369140625	2	528.795466	1055.57638	0.23923	0.0001265	1.9026	0.0010061	2.1418	0.0011326	529.2976462690747	53.219	1.1114	53.236	52.872	53.983	0.017487					38	30	2	0	0	0	0.20789	1	4759	4759		35.618	8.9254	1	55588	+		20622	20318	13933	13943	23826	23826					0.050814491971550524
KIATRYASF	9	Unmodified	_KIATRYASF_					0	0	0			REV__ENSG00000152818|ENST00000367545|UTRN	REV__ENSG00000152818|ENST00000367545|UTRN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	528.795466	1055.57638	-0.13282	-7.0235E-05	2.232	0.0011803	2.0992	0.00111	528.7965377079398	53.318	0.46858	53.294	53.091	53.559	-0.024754	0.028733	0.00016679	NaN	35.618	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58015	+		20623	20318	13933	13943							0.050814491971550524
KIAVFQLIHK	10	Unmodified	_KIAVFQLIHK_					0	0	0			REV__nc|ENSG00000170502|Q9BW91-2|NUDT9	REV__nc|ENSG00000170502|Q9BW91-2|NUDT9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.8789672851562	2	598.879333	1195.74411	-0.39152	-0.00023447	-0.42446	-0.0002542	-0.81598	-0.00048867	598.8789120433614	60.901	1.3306	61.29	60.9	62.23	0.38945					78	37	3	0	0	0	0.5766	1	6464	6464		51.335	1.8939	1	2011500	+		20624	21668	13934	13944	23827	23827					0.15407136461794835
KIAVKEGSR	9	Unmodified	_KIAVKEGSR_					0	0	0			REV__nc|ENSG00000156711|O15264-2|MAPK13	REV__nc|ENSG00000156711|O15264-2|MAPK13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.300537109375	2	494.300916	986.587279	-1.6335	-0.00080746	1.1761	0.00058136	-0.4574	-0.0002261	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.78536	2	10142	10142;10166		29.15	0	1	46933000	+		20625	20505	13935	13945	23828;23829	23828					0.09344851571484014
KICFWLGAP	9	Unmodified	_KICFWLGAP_					0	0	0			REV__ENSG00000163527|ENST00000295770|STT3B	REV__ENSG00000163527|ENST00000295770|STT3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2945556640625	2	517.778231	1033.54191	-0.12408	-6.4246E-05	3.0303	0.001569	2.9062	0.0015048	518.2814595194983	76.697	0.40141	77.265	77.131	77.532	0.56836					22	13	2	0	0	0	0.20789	1	8777	8777		17.365	5.8539	1	385050	+		20626	20929	13936	13946	23830	23830					0.026479097847186495
KICGGSLEVL	10	Unmodified	_KICGGSLEVL_					0	0	0			REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7853698730469	2	509.78371	1017.55287	2.0655	0.0010529	1.3364	0.00068125	3.4018	0.0017342	509.7839834358301	106.91	0.92004	107.01	106.61	107.53	0.10396					57	33	3	0	0	0	0.84112	1	13043	13043		37.159	3.6435	1	400230	+		20627	18064	13937	13947	23831	23831					0.04479267368344608
KICGIIVQ	8	Unmodified	_KICGIIVQ_					0	0	0			REV__ENST00000452600.1_1_2:130987586-130988813:+|nuORF	REV__ENST00000452600.1_1_2:130987586-130988813:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.265869140625	2	437.264956	872.515359	-1.6247	-0.00071044	3.2874	0.0014375	1.6627	0.00072704	437.26636390033156	24.021	1.8701	24.079	23.417	25.287	0.058165					191	86	4	0	0	0	0.87479	1	845	845		30.504	5.0535	1	2248600	+		20628	26899	13938	13948	23832	23832					0.07400220893396181
KICLGGPL	8	Unmodified	_KICLGGPL_					0	0	0			REV__nc|ENSG00000181171|Q8NA97|FER1L6-AS1	REV__nc|ENSG00000181171|Q8NA97|FER1L6-AS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.22650146484375	2	400.738574	799.462595	1.0964	0.00043938	-2.443	-0.000979	-1.3466	-0.00053962	400.7373375116392	34.824	0.34953	35.205	34.977	35.326	0.3812					15	8	2	0	0	0	0.4196	1	2644	2644		20.482	11.66	1	94648	+		20629	30074	13939	13949	23833	23833					0.05484262830600528
KICLPHVP	8	Unmodified	_KICLPHVP_					0	0	0		ENST00000477973.3_2_3:72426341-72426569:-|nuORF	ENST00000477973.3_2_3:72426341-72426569:-|nuORF	ENST00000477973.3_2_3:72426341-72426569:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.76513671875	2	453.765123	905.515694	0.21911	9.9423E-05	1.0227	0.00046406	1.2418	0.00056348	453.7653867501488	40.992	0.89008	41.065	40.735	41.626	0.073414					74	28	3	0	0	0	0.87276	1	2651	2651		29.842	0	1	782930			20630	12369	13940	13950	23834	23834					0.059156406132501616
KICLPLLIPR	10	Unmodified	_KICLPLLIPR_					0	0	0		ENST00000396197.7_1_11:18568567-18579813:-|nuORF	ENST00000396197.7_1_11:18568567-18579813:-|nuORF	ENST00000396197.7_1_11:18568567-18579813:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.369873046875	2	583.378112	1164.74167	-2.1463	-0.0012521	-1.6392	-0.00095628	-3.7855	-0.0022084	583.3769989741414	43.059	2.3047	43.833	43.416	45.72	0.7738					144	56	4	0	0	0	0.85466	1	3931	3931		20.947	2.6225	1	7573300			20631	11113	13941	13951	23835	23835					0.16588964732477507
KICMYDRLY	9	Unmodified	_KICMYDRLY_					0	0	0		nc|ENSG00000142609|Q9C0B2|CFAP74;ENSG00000142609|ENST00000682832|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.7850952148438	2	602.796294	1203.57804	-0.25695	-0.00015489	-1.7442	-0.0010514	-2.0011	-0.0012063	602.7927070998942	50.827	0.24493	50.804	50.68	50.925	-0.02343					17	10	2	0	0	0	0.20789	1	4430	4430		17.365	12.145	1	185850			20632	4573	13942	13952	23836	23836					-0.015610011007311186
KICMYDRLY	9	Unmodified	_KICMYDRLY_					0	0	0		nc|ENSG00000142609|Q9C0B2|CFAP74;ENSG00000142609|ENST00000682832|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	602.796294	1203.57804	-1.114	-0.00067154	1.6428	0.00099025	0.52871	0.0003187	602.796126618129	50.839	0.23336	50.846	50.692	50.925	0.0077438	0.021153	0.0019706	NaN	17.365	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	151080			20633	4573	13942	13952							-0.015610011007311186
KIDDILLF	8	Unmodified	_KIDDILLF_					0	0	0			REV__nc|ENSG00000102893|Q93100-4|PHKB	REV__nc|ENSG00000102893|Q93100-4|PHKB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7893371582031	2	488.789318	975.564084	1.4412	0.00070445	-1.6239	-0.00079376	-0.18272	-8.931E-05	488.78836786844454	102.14	0.87674	102.4	102.03	102.91	0.26323					61	21	5	0	0	0	0.79403	1	12423	12423		63.306	9.9548	1	1967000	+		20634	29749	13943	13953	23837	23837					0.07532412734155969
KIDNWAKLKK	10	Unmodified	_KIDNWAKLKK_					0	0	0			REV__ENSG00000174444|ENST00000307961|RPL4	REV__ENSG00000174444|ENST00000307961|RPL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.25653076171875	3	415.255557	1242.74484	2.382	0.00098912	-1.9936	-0.00082787	0.38832	0.00016125	415.2546167600323	26.136	0.8841	25.768	25.501	26.386	-0.36845					43	19	3	0	0	0	0.17795	1	1419	1419		91.265	2.2364	1	386920	+		20635	21993	13944	13954	23838	23838					0.13317931110805148
KIDNWAKLKK	10	Unmodified	_KIDNWAKLKK_					0	0	0			REV__ENSG00000174444|ENST00000307961|RPL4	REV__ENSG00000174444|ENST00000307961|RPL4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	415.255557	1242.74484	0.70878	0.00029432	-0.40849	-0.00016963	0.30029	0.0001247	415.25530303971055	26.174	1.0709	25.916	25.551	26.622	-0.2572	0.074229	0.00090809	NaN	91.265	51	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	283280	+		20636	21993	13944	13954							0.13317931110805148
KIDNWAKLKK	10	Unmodified	_KIDNWAKLKK_					0	0	0			REV__ENSG00000174444|ENST00000307961|RPL4	REV__ENSG00000174444|ENST00000307961|RPL4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	415.255557	1242.74484	2.382	0.00098912	-1.9936	-0.00082787	0.38832	0.00016125	415.2546167600323	26.136	0.8841	25.768	25.501	26.386	-0.36845	-0.074229	-0.0010666	NaN	91.265	43	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	386920	+		20637	21993	13944	13954							0.13317931110805148
KIDYVDSIY	9	Unmodified	_KIDYVDSIY_					0	0	0			REV__nc|ENSG00000135913|Q86T82-2|USP37	REV__nc|ENSG00000135913|Q86T82-2|USP37	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	558.2831420898438	2	558.284597	1114.55464	0.31862	0.00017788	-0.33006	-0.00018426	-0.011437	-6.3853E-06	558.2843533190427	75.228	0.55041	75.353	75.091	75.641	0.12545					32	13	3	0	0	0	0.76255	1	7006	7006		35.618	2.1253	1	206500	+		20638	19266	13945	13955	23839	23839					0.0019459965797068435
KIEEVSAR	8	Unmodified	_KIEEVSAR_					0	0	0		nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1;ENSG00000105486|ENST00000263274|LIG1	nc|ENSG00000105486|P18858-2|LIG1	nc|ENSG00000105486|P18858-2|LIG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.73406982421875	2	466.263999	930.513445	1.0324	0.00048139	-1.2875	-0.00060033	-0.25509	-0.00011894	466.2638534041706	23.833	0.76485	23.259	22.965	23.729	-0.57415					27	17	3	0	0	0	0.4196	1	1074	1074		26.693	2.1737	1	233960			20639	2221	13946	13956	23840	23840					0.04540883409151775
KIEFGSVLSRK	11	Unmodified	_KIEFGSVLSRK_					0	0	0		ENSG00000244306.11,DUXAP10,chr14,-,I11.1,19284795,19292525|24|11.78|1|intron;ENSG00000225210.10,DUXAP9,chr14,+,I10.1,19107111,19115191|17|11.4|1|intron	ENSG00000244306.11,DUXAP10,chr14,-,I11.1,19284795,19292525|24|11.78|1|intron	ENSG00000244306.11,DUXAP10,chr14,-,I11.1,19284795,19292525|24|11.78|1|intron	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	632.3743286132812	2	632.374612	1262.73467	1.5156	0.00095844	-1.8319	-0.0011584	-0.31625	-0.00019999	632.3734512075463	49.124	0.5274	50.028	49.765	50.292	0.90424					31	12	3	0	0	0	0.67762	1	4811	4811		35.178	7.296	1	1421900			20640	8706	13947	13957	23841	23841					0.113813233855808
KIEGRNKIRK	10	Unmodified	_KIEGRNKIRK_					0	0	0			REV__ENSG00000107560|ENST00000355624|RAB11FIP2	REV__ENSG00000107560|ENST00000355624|RAB11FIP2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3960571289062	2	621.39367	1240.77279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.439	1	19.509	19.009	20.009	0.070713								0	0	0	0.45132	1	425	425		23.523	3.5259	1		+		20641	17662	13948	13958	23842	23842					0.16203254090919472
KIEIIVEQGY	10	Unmodified	_KIEIIVEQGY_					0	0	0			REV__ENST00000438261.5_2_2:70515278-70520438:-|nuORF	REV__ENST00000438261.5_2_2:70515278-70520438:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3323364257812	2	596.334621	1190.65469	-0.50602	-0.00030176	-2.5525	-0.0015221	-3.0585	-0.0018239	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.82886	1	10128	10128		37.812	0.65241	1	1259900	+		20642	26719	13949	13959	23843	23843					0.06698836991768076
KIEKSLNL	8	Unmodified	_KIEKSLNL_					0	0	0			REV__ENST00000269187.9_2_18:33689014-33689293:-|nuORF	REV__ENST00000269187.9_2_18:33689014-33689293:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.7959289550781	2	472.792392	943.570232	1.3274	0.00062757	-1.2423	-0.00058737	0.085029	4.0201E-05	472.79163842158493	26.592	0.84707	26.252	25.702	26.549	-0.34035					32	18	3	0	0	0	0.53378	1	1491	1491		74.255	2.3776	1	164560	+		20643	24519	13950	13960	23844	23844					0.09618930965643813
KIELLLETF	9	Unmodified	_KIELLLETF_					0	0	0			REV__ENST00000462537.3_1_6:36646575-36648628:+|nuORF	REV__ENST00000462537.3_1_6:36646575-36648628:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.332763671875	2	553.328808	1104.64306	2.7435	0.0015181	3.7877	0.0020958	6.5312	0.0036139	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.78058	1	10496	10496		30.504	5.9844	1	4237100	+		20644	27056	13951	13961	23845	23845					0.09492639968425465
KIELSKVAM	9	Unmodified	_KIELSKVAM_					0	0	0			REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8037414550781	2	509.801903	1017.58925	-0.054339	-2.7702E-05	3.6212	0.0018461	3.5668	0.0018184	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.58668	3	8824	8656;8704;8824		47.657	10.275	1	2906900	+		20645	26538	13952	13962	23846;23847;23848	23848					0.08116144265068215
KIELSKVAM	9	Unmodified	_KIELSKVAM_					0	0	0			REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8036804199219	2	509.801903	1017.58925	0.9788	0.00049899	2.5641	0.0013072	3.5429	0.0018062	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.69624	1	8640	8640		40.778	3.6191	1	979740	+		20646	26538	13952	13962	23849	23849					0.08116144265068215
KIELSKVAM	9	Unmodified	_KIELSKVAM_					0	0	0			REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8036804199219	2	509.801903	1017.58925	1.253	0.0006388	2.312	0.0011787	3.5651	0.0018175	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.71772	1	9034	9034		39.253	10.103	1	3243500	+		20647	26538	13952	13962	23850	23850					0.08116144265068215
KIELSKVAM	9	Unmodified	_KIELSKVAM_					0	0	0			REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.80352783203125	2	509.801903	1017.58925	0.075306	3.8391E-05	3.4995	0.001784	3.5748	0.0018224	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.64555	1	8595	8595		44.377	3.599	1	958280	+		20648	26538	13952	13962	23851	23851					0.08116144265068215
KIELSKVAM	9	Unmodified	_KIELSKVAM_					0	0	0			REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8037109375	2	509.801903	1017.58925	0.22319	0.00011378	3.3375	0.0017014	3.5607	0.0018152	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.71772	2	8735	8735;8832		39.253	11.371	1	3453000	+		20649	26538	13952	13962	23852;23853	23852					0.08116144265068215
KIELSKVAM	9	Unmodified	_KIELSKVAM_					0	0	0			REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8035888671875	2	509.801903	1017.58925	-0.38177	-0.00019462	3.8836	0.0019799	3.5019	0.0017853	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.77244	1	8184	8184		32.812	0.85756	1	948010	+		20650	26538	13952	13962	23854	23854					0.08116144265068215
KIELSKVAM	9	Unmodified	_KIELSKVAM_					0	0	0			REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8035583496094	2	509.801903	1017.58925	-0.37726	-0.00019233	3.8775	0.0019768	3.5002	0.0017844	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.71772	3	8470	8470;8506;8626		39.253	7.4938	1	3415500	+		20651	26538	13952	13962	23855;23856;23857	23855					0.08116144265068215
KIELSKVAM	9	Unmodified	_KIELSKVAM_					0	0	0			REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8035888671875	2	509.801903	1017.58925	0.68681	0.00035014	2.8448	0.0014503	3.5316	0.0018004	509.80326235241614	86.403	4.313	86.552	84.994	89.307	0.14902					345	101	5	0	0	0	0.55097	10	8516	8397;8445;8469;8492;8516;8564;8575;8611;8623;8647		49.442	11.371	1	3017600	+		20652	26538	13952	13962	23858;23859;23860;23861;23862;23863;23864;23865;23866;23867	23862					0.08116144265068215
KIELSKVAM	9	Unmodified	_KIELSKVAM_					0	0	0			REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8034362792969	2	509.801903	1017.58925	0.31699	0.0001616	3.2339	0.0016486	3.5509	0.0018103	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.69624	1	10095	10095		40.778	2.9666	1	2635100	+		20653	26538	13952	13962	23868	23868					0.08116144265068215
KIEPADMNESC	11	Unmodified	_KIEPADMNESC_					0	0	0		ENST00000476908.1_1_1:114948024-114949565:-|nuORF;nc|ENSG00000197323|Q9UPN9-2|TRIM33;ENSG00000197323|ENST00000358465|TRIM33	ENST00000476908.1_1_1:114948024-114949565:-|nuORF	ENST00000476908.1_1_1:114948024-114949565:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.7654418945312	2	618.765388	1235.51622	-1.1348	-0.00070217	1.6405	0.0010151	0.5057	0.00031291	618.766319163339	31.703	0.40106	31.703	31.444	31.845	0					24	15	2	0	0	0	0.67778	1	1528	1528		35.152	0	1	71330			20654	8153	13953	13963	23869	23869					-0.0921139731049152
KIEPFIFPYKQ	11	Unmodified	_KIEPFIFPYKQ_					0	0	0			REV__ENST00000517413.5_1_8:17503437-17511044:-|nuORF	REV__ENST00000517413.5_1_8:17503437-17511044:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2040100097656	3	470.599101	1408.77547	0.13849	6.5174E-05	-2.3749	-0.0011176	-2.2364	-0.0010524	470.93183879860567	28.838	0.12875	28.665	28.588	28.717	-0.17336					4	2	2	0	0	0	0.17567	1	1786	1786		18.966	0	1	24193	+		20655	28043	13954	13964	23870	23870					0.08743664705207266
KIERPIID	8	Unmodified	_KIERPIID_					0	0	0			REV__nc|ENSG00000153015|Q6UX04-2|CWC27	REV__nc|ENSG00000153015|Q6UX04-2|CWC27	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.2995300292969	2	492.297842	982.581131	-0.0089473	-4.4047E-06	-3.7493	-0.0018458	-3.7583	-0.0018502	492.2950850462952	58.166	0.23126	58.136	57.979	58.21	-0.029865					9	5	2	0	0	0	0.4196	1	5385	5385		27.882	13.745	1	47669	+		20656	20328	13955	13965	23871	23871					0.08914333339930636
KIERPIID	8	Unmodified	_KIERPIID_					0	0	0			REV__nc|ENSG00000153015|Q6UX04-2|CWC27	REV__nc|ENSG00000153015|Q6UX04-2|CWC27	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.29974365234375	2	492.297842	982.581131	-2.4761	-0.001219	-0.64989	-0.00031994	-3.126	-0.0015389	492.2968160524338	58.757	1.1853	58.791	57.992	59.177	0.033905					63	37	2	0	0	0	0.4196	1	5378	5378		45.972	5.3996	1	86851	+		20657	20328	13955	13965	23872	23872					0.08914333339930636
KIERSKIVST	10	Unmodified	_KIERSKIVST_					0	0	0		nc|ENSG00000156194|O14830-2|PPEF2;ENSG00000156194|ENST00000286719|PPEF2	nc|ENSG00000156194|O14830-2|PPEF2	nc|ENSG00000156194|O14830-2|PPEF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.855712890625	2	580.853512	1159.69247	-0.88269	-0.00051271	3.9113	0.0022719	3.0286	0.0017592	580.8556493633963	65.546	0.35038	65.55	65.307	65.657	0.0046921					34	18	2	0	0	0	0.73395	1	6172	6172		42.864	6.4175	1	191190			20658	5366	13956	13966	23873	23873					0.11901347977209298
KIETRIDTAG	10	Unmodified	_KIETRIDTAG_					0	0	0		nc|ENSG00000104450|Q07617-2|SPAG1;ENSG00000104450|ENST00000388798|SPAG1	nc|ENSG00000104450|Q07617-2|SPAG1	nc|ENSG00000104450|Q07617-2|SPAG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3063354492188	2	552.306395	1102.59824	-0.70613	-0.00039	0.73262	0.00040463	0.026487	1.4629E-05	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.70553	1	9510	9510		44.377	2.9506	1	1609500			20659	2134	13957	13967	23874	23874					0.05104209155092576
KIETVRLAS	9	Unmodified	_KIETVRLAS_					0	0	0		ENSG00000125878|ENST00000246080|TCF15	ENSG00000125878|ENST00000246080|TCF15	ENSG00000125878|ENST00000246080|TCF15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.80657958984375	2	508.808574	1015.60259	-0.055037	-2.8003E-05	-1.6702	-0.00084983	-1.7253	-0.00087783	508.8076940504988	90.104	1.2492	90.172	89.514	90.764	0.068703					64	28	4	0	0	0	0.7932	1	9216	9216		26.693	0	1	1111600			20660	3424	13958	13968	23875	23875					0.09541718368654983
KIETVRLAS	9	Unmodified	_KIETVRLAS_					0	0	0		ENSG00000125878|ENST00000246080|TCF15	ENSG00000125878|ENST00000246080|TCF15	ENSG00000125878|ENST00000246080|TCF15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8061218261719	2	508.808574	1015.60259	0.94338	0.00048	-2.2339	-0.0011366	-1.2905	-0.00065661	508.8073543874404	89.499	0.84901	89.949	89.406	90.255	0.45058					38	21	2	0	0	0	0.7932	1	10565	10565		26.693	0	1	1156600			20661	3424	13958	13968	23876	23876					0.09541718368654983
KIFEDYSELQ	10	Unmodified	_KIFEDYSELQ_					0	0	0			REV__ENSG00000135837|ENST00000367607|CEP350	REV__ENSG00000135837|ENST00000367607|CEP350	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.8982849121094	3	424.543321	1270.60813	0.8691	0.00036897	3.2165	0.0013655	4.0856	0.0017345	424.5444998584011	28.998	0.63845	28.825	28.468	29.107	-0.17336					31	14	3	0	0	0	0.37624	1	1799	1799		12.433	0	1	245720	+		20662	19256	13959	13969	23877	23877					-0.016346476301805524
KIFITRFH	8	Unmodified	_KIFITRFH_					0	0	0			REV__chr9:101671107-101686596|27|44.63|0.33|7.1|-|0|GRIN3A,GRIN3A|1	REV__chr9:101671107-101686596|27|44.63|0.33|7.1|-|0|GRIN3A,GRIN3A|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3173217773438	2	531.316369	1060.61818	0.23787	0.00012639	4.3265	0.0022988	4.5644	0.0024252	531.3183123814076	94.878	1.4608	95.298	94.89	96.35	0.41963					101	35	4	0	0	0	0.92457	1	11439	11439		47.916	3.7988	1	2093500	+		20663	15928	13960	13970	23878	23878					0.09030049676357521
KIFPLLGL	8	Unmodified	_KIFPLLGL_					0	0	0		ENST00000530314.5_1_16:70543112-70557304:-|nuORF;ENST00000562200.5_1_16:70543798-70557434:-|nuORF;nc|ENSG00000103051|Q9H9E3-2|COG4;nc|ENSG00000103051|Q9H9E3-3|COG4;nc|ENSG00000103051|Q9H9E3|COG4;ENSG00000103051|ENST00000323786|COG4	ENST00000530314.5_1_16:70543112-70557304:-|nuORF	ENST00000530314.5_1_16:70543112-70557304:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.79718017578125	2	450.799489	899.584425	-0.13398	-6.0398E-05	-4.2354	-0.0019093	-4.3694	-0.0019697	450.79743897889335	33.712	0.66785	33.882	33.61	34.278	0.16971					34	15	3	0	0	0	0.84443	1	2452	2452		60.404	4.8994	1	702620			20664	2049	13961	13971	23879	23879					0.13061628184607343
KIFSGVFVK	9	Unmodified	_KIFSGVFVK_					0	0	0		ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENSG00000146223|ENST00000493763|RPL7L1	ENST00000530523.1_1_8:42580956-42581139:-|nuORF	ENST00000530523.1_1_8:42580956-42581139:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.8124389648438	2	512.813128	1023.6117	-0.55571	-0.00028497	0.8669	0.00044456	0.31119	0.00015958	512.813359643598	46.644	1.1614	47.115	46.735	47.896	0.4714					46	27	2	0	0	0	0.085559	3	4394	4394;4405;4416		96.034	30.23	1	2491900			20665	13347	13962	13972	23880;23881;23882	23880					0.10084111724995637
KIGDFGLTK	9	Unmodified	_KIGDFGLTK_					0	0	0		ENSG00000096968|ENST00000381652|JAK2;ENSG00000162434|ENST00000342505|JAK1	ENSG00000096968|ENST00000381652|JAK2;ENSG00000162434|ENST00000342505|JAK1	ENSG00000162434|ENST00000342505|JAK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.78363037109375	2	489.784567	977.554582	-2.1684	-0.0010621	0.38357	0.00018787	-1.7849	-0.0008742	489.78488376391573	42.006	0.87231	42.42	42.237	43.109	0.4139					35	21	3	0	0	0	0.25415	2	3716	3716;3730		68.846	17.511	1	1416700			20666	1744;5690	13963	13973	23883;23884	23883					0.06490644448615512
KIGDFGLTK	9	Unmodified	_KIGDFGLTK_					0	0	0		ENSG00000096968|ENST00000381652|JAK2;ENSG00000162434|ENST00000342505|JAK1	ENSG00000096968|ENST00000381652|JAK2;ENSG00000162434|ENST00000342505|JAK1	ENSG00000162434|ENST00000342505|JAK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.7843322753906	2	489.784567	977.554582	-1.8191	-0.00089097	0.063774	3.1236E-05	-1.7553	-0.00085973	489.78478769887204	41.854	0.70778	42.488	42.28	42.988	0.6339					32	17	3	0	0	0	0.25415	1	3704	3704		68.846	12.125	1	1286800			20667	1744;5690	13963	13973	23885	23885					0.06490644448615512
KIGEKNRV	8	Unmodified	_KIGEKNRV_					0	0	0			REV__ENSG00000204856|ENST00000377673|FAM216A	REV__ENSG00000204856|ENST00000377673|FAM216A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2877502441406	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.81184	1	10428	10428		19.997	0.6368	1	48574000	+		20668	23525	13964	13974	23886	23886					0.0874858239999412
KIGELTLEEK	10	Unmodified	_KIGELTLEEK_					0	0	0			REV__ENST00000485101.5_1_3:186504293-186504446:+|nuORF	REV__ENST00000485101.5_1_3:186504293-186504446:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.3331298828125	2	580.332079	1158.6496	0.35844	0.00020801	0.45023	0.00026128	0.80867	0.00046929	580.3322580000553	39.826	0.82263	39.779	39.423	40.245	-0.04789					54	21	4	0	0	0	0.21391	1	2477	2477		82.75	3.0379	1	1097600	+		20669	20519	13965	13975	23887	23887					0.07662533129132498
KIGELTLEEK	10	Unmodified	_KIGELTLEEK_					0	0	0			REV__ENST00000485101.5_1_3:186504293-186504446:+|nuORF	REV__ENST00000485101.5_1_3:186504293-186504446:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	580.332079	1158.6496	-1.7552	-0.0010186	1.5661	0.00090883	-0.18918	-0.00010978	580.3325077732475	40.06	0.21709	40.07	39.9	40.117	0.0092773	0.16165	0.0012841	NaN	82.75	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21288	+		20670	20519	13965	13975							0.07662533129132498
KIGEVSSPK	9	Unmodified	_KIGEVSSPK_					0	0	0		nc|ENSG00000035928|P35251|RFC1;ENSG00000035928|ENST00000349703|RFC1	nc|ENSG00000035928|P35251|RFC1	nc|ENSG00000035928|P35251|RFC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7740783691406	2	472.7742	943.533846	0.76275	0.00036061	0.37727	0.00017837	1.14	0.00053897	472.7737350160956	22.936	0.70856	22.517	22.016	22.725	-0.41879					42	16	4	0	0	0	0.34325	1	977	977		61.691	1.3973	1	330150			20671	900	13966	13976	23888	23888					0.05982054068954312
KIGKLTELH	9	Unmodified	_KIGKLTELH_					0	0	0		ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF	ENSG00000131018|ENST00000367255|SYNE1	ENSG00000131018|ENST00000367255|SYNE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8180541992188	2	519.818941	1037.62333	0.066288	3.4458E-05	-1.3041	-0.00067792	-1.2379	-0.00064346	519.8181781419161	84.428	1.8402	84.864	83.581	85.421	0.43538					115	44	4	0	0	0	0.22631	2	9790	9752;9790		71.296	7.9894	1	6841200			20672	3707	13967	13977	23889;23890	23890					0.10602308748298128
KIGKLTELH	9	Unmodified	_KIGKLTELH_					0	0	0		ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF	ENSG00000131018|ENST00000367255|SYNE1	ENSG00000131018|ENST00000367255|SYNE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.81884765625	2	519.818941	1037.62333	-0.067594	-3.5137E-05	-1.1183	-0.00058132	-1.1859	-0.00061646	519.8182715270425	84.44	1.4919	84.888	84.056	85.547	0.44736					111	36	4	0	0	0	0.09311	4	9850	9790;9814;9827;9850		94.006	4.5243	1	7125200			20673	3707	13967	13977	23891;23892;23893;23894	23894					0.10602308748298128
KIGKSVTA	8	Unmodified	_KIGKSVTA_					0	0	0		nc|ENSG00000048649|Q96T23-2|RSF1;ENSG00000048649|ENST00000308488|RSF1;ENST00000534794.1_1_11:77413524-77475723:-|nuORF	nc|ENSG00000048649|Q96T23-2|RSF1	nc|ENSG00000048649|Q96T23-2|RSF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.2522888183594	2	402.252903	802.491253	-0.39767	-0.00015996	-0.3862	-0.00015535	-0.78388	-0.00031532	402.2527064197999	20.146	0.42935	20.076	19.913	20.343	-0.069733					30	16	2	0	0	0	0.83646	1	509	509		12.207	3.3845	1	87164			20674	976	13968	13978	23895	23895					0.0821070373136763
KIGQRHRRK	9	Unmodified	_KIGQRHRRK_					0	0	0		ENST00000469442.5_1_2:86014100-86014427:+|nuORF	ENST00000469442.5_1_2:86014100-86014427:+|nuORF	ENST00000469442.5_1_2:86014100-86014427:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.2633056640625	2	589.870697	1177.72684	-0.78928	-0.00046557	2.1063	0.0012424	1.317	0.00077686	589.8718405936512	81.968	0.751	82.395	82.08	82.831	0.42646					35	18	2	0	0	0	0.20789	1	9506	9506		38.806	0	1	612300			20675	12198	13969	13979	23896	23896					0.14508653699340357
KIGTVVAW	8	Unmodified	_KIGTVVAW_					0	0	0			REV__ENSG00000151881|ENST00000397080|TMEM267	REV__ENSG00000151881|ENST00000397080|TMEM267	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2652893066406	2	437.263271	872.511988	1.7902	0.0007828	4.1025	0.0017939	5.8928	0.0025767	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.89494	1	814	814		37.159	6.6555	1	738160	+		20676	20274	13970	13980	23897	23897					0.07063294111026153
KIGVHAFQ	8	Unmodified	_KIGVHAFQ_					0	0	0		ENSG00000187608|ENST00000649529|ISG15	ENSG00000187608|ENST00000649529|ISG15	ENSG00000187608|ENST00000649529|ISG15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2584228515625	2	450.25852	898.502486	-0.62857	-0.00028302	0.25064	0.00011285	-0.37793	-0.00017017	450.25857361491086	26.004	1.9799	25.747	25.175	27.155	-0.2572					122	44	6	0	0	0	0.60155	2	1408	1408;1470		71.378	7.5886	1	7125800			20677	7864	13971	13981	23898;23899	23898					0.04917525825510438
KIHGKQVF	8	Unmodified	_KIHGKQVF_					0	0	0		chr1:111120591-111124742|20|15.9|0.62|4.68|-|0|None,DRAM2|1;ENST00000477769.1_1_1:111662258-111663219:-|nuORF;ENSG00000156171|ENST00000484310|DRAM2	chr1:111120591-111124742|20|15.9|0.62|4.68|-|0|None,DRAM2|1	chr1:111120591-111124742|20|15.9|0.62|4.68|-|0|None,DRAM2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.7855224609375	2	478.787444	955.560336	-0.42495	-0.00020346	-3.5625	-0.0017057	-3.9874	-0.0019091	478.78545742505617	92.153	2.1454	92.198	91.261	93.406	0.045448					108	50	4	0	0	0	0.9159	1	9609	9609		44.531	12.576	1	799270			20678	17	13972	13982	23900	23900					0.08077787750949028
KIHGRDGG	8	Unmodified	_KIHGRDGG_					0	0	0		ENST00000564980.1_1_16:29830747-29832266:-|nuORF	ENST00000564980.1_1_16:29830747-29832266:-|nuORF	ENST00000564980.1_1_16:29830747-29832266:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.226806640625	2	420.227751	838.440949	0.042435	1.7832E-05	0.092754	3.8978E-05	0.13519	5.681E-05	420.2277069932212	78.969	5.8282	79.518	76.332	82.16	0.54945					273	145	3	0	0	0	0.89494	1	9050	9050		37.159	3.6435	1	581780			20679	13901	13973	13983	23901	23901					0.015265941262327942
KIHKAFLT	8	Unmodified	_KIHKAFLT_					0	0	0			REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2979431152344	2	479.297645	956.580737	-0.46769	-0.00022416	0.69766	0.00033439	0.22997	0.00011022	479.2977943251352	57.596	1.6193	57.99	57.574	59.193	0.39407					92	39	4	0	0	0	0.92457	1	5997	5997		47.916	0	1	5272200	+		20680	19654	13974	13984	23902	23902					0.10070958410744879
KIHKFLAS	8	Unmodified	_KIHKFLAS_					0	0	0			REV__ENST00000237654.8_1_4:77969082-77969268:-|nuORF	REV__ENST00000237654.8_1_4:77969082-77969268:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.28765869140625	2	472.28982	942.565087	-0.97075	-0.00045848	-3.4316	-0.0016207	-4.4023	-0.0020792	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.86288	2	9612	9469;9612		33.516	1.5607	1	26024000	+		20681	24219	13975	13985	23903;23904	23904					0.09150671893689832
KIHKFLAS	8	Unmodified	_KIHKFLAS_					0	0	0			REV__ENST00000237654.8_1_4:77969082-77969268:-|nuORF	REV__ENST00000237654.8_1_4:77969082-77969268:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2884826660156	2	472.28982	942.565087	-0.91361	-0.00043149	-2.9295	-0.0013836	-3.8431	-0.0018151	472.2883987984471	99.414	1.6316	99.414	99.097	100.73	0					84	38	3	0	0	0	0.84341	2	10142	10127;10142		26.796	3.7209	1	360760	+		20682	24219	13975	13985	23905;23906	23906					0.09150671893689832
KIHKFLAS	8	Unmodified	_KIHKFLAS_					0	0	0			REV__ENST00000237654.8_1_4:77969082-77969268:-|nuORF	REV__ENST00000237654.8_1_4:77969082-77969268:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28778076171875	2	472.28982	942.565087	-0.108	-5.1006E-05	-4.4569	-0.0021049	-4.5649	-0.0021559	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.89962	1	10132	10132		38.806	6.8513	1	46909000	+		20683	24219	13975	13985	23907	23907					0.09150671893689832
KIHKFLAS	8	Unmodified	_KIHKFLAS_					0	0	0			REV__ENST00000237654.8_1_4:77969082-77969268:-|nuORF	REV__ENST00000237654.8_1_4:77969082-77969268:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2879943847656	2	472.28982	942.565087	-0.91025	-0.0004299	-2.7735	-0.0013099	-3.6837	-0.0017398	472.2885293382865	99.077	1.813	99.3	98.699	100.51	0.22263					102	42	3	0	0	0	0.85277	1	10379	10379		25.45	0	1	580890	+		20684	24219	13975	13985	23908	23908					0.09150671893689832
KIHKFLAS	8	Unmodified	_KIHKFLAS_					0	0	0			REV__ENST00000237654.8_1_4:77969082-77969268:-|nuORF	REV__ENST00000237654.8_1_4:77969082-77969268:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28692626953125	2	472.28982	942.565087	-1.7052	-0.00080535	-2.1722	-0.0010259	-3.8774	-0.0018313	472.2887688366916	99.113	1.9296	99.299	98.808	100.74	0.18582					95	44	3	0	0	0	0.85277	1	10307	10307		25.45	1.2474	1	583920	+		20685	24219	13975	13985	23909	23909					0.09150671893689832
KIHTFNKT	8	Unmodified	_KIHTFNKT_					0	0	0		nc|ENSG00000066651|Q7Z4G4-3|TRMT11;nc|ENSG00000066651|Q7Z4G4-2|TRMT11;ENSG00000066651|ENST00000334379|TRMT11	nc|ENSG00000066651|Q7Z4G4-3|TRMT11	nc|ENSG00000066651|Q7Z4G4-3|TRMT11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7801513671875	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.86677	1	8153	8153		27.882	3.6795	1	385180			20686	1164	13976	13986	23910	23910					0.05589180025708629
KIHTGKKSHK	10	Unmodified	_KIHTGKKSHK_					0	0	0		ENSG00000165512|ENST00000298299|ZNF22	ENSG00000165512|ENST00000298299|ZNF22	ENSG00000165512|ENST00000298299|ZNF22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3532104492188	2	582.354014	1162.69348	-0.84093	-0.00048972	-0.12395	-7.2182E-05	-0.96488	-0.0005619	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.86587	1	11424	11424		29.17	1.0886	1	77752000			20687	6089	13977	13987	23911	23911					0.1186360713677459
KIIAFVLEGK	10	Unmodified	_KIIAFVLEGK_					0	0	0		nc|ENSG00000152291|O43493-6|TGOLN2;nc|ENSG00000152291|O43493-4|TGOLN2;ENSG00000152291|ENST00000377386|TGOLN2;nc|ENSG00000152291|O43493-5|TGOLN2;nc|ENSG00000152291|O43493-3|TGOLN2;nc|ENSG00000152291|O43493-7|TGOLN2	nc|ENSG00000152291|O43493-6|TGOLN2	nc|ENSG00000152291|O43493-6|TGOLN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.3531494140625	2	559.352617	1116.69068	0.93714	0.00052419	-0.97071	-0.00054297	-0.033576	-1.8781E-05	559.3519365965482	54.038	0.92248	54.445	54.153	55.075	0.40663					50	21	4	0	0	0	0.062895	4	5482	5473;5482;5495;5509		106.88	62.503	1	1260000			20688	5167	13978	13988	23912;23913;23914;23915	23913					0.1370033895927918
KIIAFVLEGK	10	Unmodified	_KIIAFVLEGK_					0	0	0		nc|ENSG00000152291|O43493-6|TGOLN2;nc|ENSG00000152291|O43493-4|TGOLN2;ENSG00000152291|ENST00000377386|TGOLN2;nc|ENSG00000152291|O43493-5|TGOLN2;nc|ENSG00000152291|O43493-3|TGOLN2;nc|ENSG00000152291|O43493-7|TGOLN2	nc|ENSG00000152291|O43493-6|TGOLN2	nc|ENSG00000152291|O43493-6|TGOLN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.352294921875	2	559.352617	1116.69068	-0.29767	-0.0001665	0.38204	0.0002137	0.084368	4.7192E-05	559.3526866821642	53.842	0.79418	54.427	54.123	54.917	0.58474					47	18	4	0	0	0	0.098191	3	5480	5468;5480;5491		101.46	41.342	1	1479700			20689	5167	13978	13988	23916;23917;23918	23917					0.1370033895927918
KIIATFKH	8	Unmodified	_KIIATFKH_					0	0	0		ENST00000518373.1_1_8:64100204-64101373:+|nuORF;ENSG00000185728|ENST00000539294|YTHDF3	ENST00000518373.1_1_8:64100204-64101373:+|nuORF	ENST00000518373.1_1_8:64100204-64101373:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.29742431640625	2	479.297645	956.580737	-0.46769	-0.00022416	0.69766	0.00033439	0.22997	0.00011022	479.2977943251352	57.596	1.6193	57.99	57.574	59.193	0.39407					92	39	4	0	0	0	0.66521	1	6021	6021		68.787	8.4929	1	5272200			20690	7738	13979	13989	23919	23919					0.10070958410744879
KIIATFKH	8	Unmodified	_KIIATFKH_					0	0	0		ENST00000518373.1_1_8:64100204-64101373:+|nuORF;ENSG00000185728|ENST00000539294|YTHDF3	ENST00000518373.1_1_8:64100204-64101373:+|nuORF	ENST00000518373.1_1_8:64100204-64101373:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.29803466796875	2	479.297645	956.580737	-0.25174	-0.00012066	0.42964	0.00020592	0.1779	8.5265E-05	479.2977080659384	57.467	1.4488	58.023	57.642	59.091	0.55512					79	35	4	0	0	0	0.89494	1	6019	6019		37.159	0.13063	1	5116300			20691	7738	13979	13989	23920	23920					0.10070958410744879
KIIGIPTCV	9	Unmodified	_KIIGIPTCV_					0	0	0		nc|ENSG00000178460|Q4G0Z9-3|MCMDC2;nc|ENSG00000178460|Q4G0Z9-2|MCMDC2;nc|ENSG00000178460|Q4G0Z9-4|MCMDC2;ENST00000428734.5_1_8:67786448-67831401:+|nuORF;ENSG00000178460|ENST00000422365|MCMDC2	nc|ENSG00000178460|Q4G0Z9-3|MCMDC2	nc|ENSG00000178460|Q4G0Z9-3|MCMDC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.288330078125	2	472.285889	942.557224	2.1469	0.001014	2.0105	0.00094952	4.1574	0.0019635	472.2867264071782	114.66	1.2655	114.67	114.37	115.64	0.0094528					102	61	2	0	0	0	0.7932	1	13826	13826		24.203	0	1	83672			20692	7208	13980	13990	23921	23921					0.08364776581913702
KIIIEPIT	8	Unmodified	_KIIIEPIT_					0	0	0			REV__ENSG00000124491|ENST00000264870|F13A1	REV__ENSG00000124491|ENST00000264870|F13A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8009033203125	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.7961	1	3702	3702		17.365	0	1	269820	+		20693	18589	13981	13991	23922	23922					0.11905003113804469
KIIIFLYC	8	Unmodified	_KIIIFLYC_					0	0	0			REV__nc|ENSG00000180616|P30874-2|SSTR2	REV__nc|ENSG00000180616|P30874-2|SSTR2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.80120849609375	2	506.798632	1011.58271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.864	1	43.806	43.306	44.306	-0.058262								0	0	0	0.29199	1	3051	3051		29.842	3.1486	1		+		20694	22404	13982	13992	23923	23923					0.07738251104331084
KIIITEPSD	9	Unmodified	_KIIITEPSD_					0	0	0		nc|ENSG00000155307|Q9NSI8-2|SAMSN1;ENSG00000155307|ENST00000400566|SAMSN1;nc|ENSG00000155307|Q9NSI8-3|SAMSN1	nc|ENSG00000155307|Q9NSI8-2|SAMSN1	nc|ENSG00000155307|Q9NSI8-2|SAMSN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.24114990234375	2	508.28714	1014.55973	1.4743	0.00074938	-0.54693	-0.000278	0.92739	0.00047138	508.2867162601522	37.21	0.37814	37.696	37.492	37.87	0.48581					14	8	2	0	0	0	0.20789	1	2993	2993		10.265	3.5297	1	127010			20695	5320	13983	13993	23924	23924					0.05302903520566815
KIIIVFPD	8	Unmodified	_KIIIVFPD_					0	0	0			REV__nc|ENSG00000197121|Q75T13-2|PGAP1	REV__nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7938537597656	2	472.794404	943.574254	0.0067677	3.1997E-06	-4.2341	-0.0020019	-4.2274	-0.0019987	472.79235257019036	26.57	0.85389	26.394	25.983	26.837	-0.17559					29	18	2	0	0	0	0.9295	1	1469	1469		55.504	0.72789	1	145100	+		20696	23199	13984	13994	23925	23925					0.10021020459362262
KIILTGQK	8	Unmodified	_KIILTGQK_					0	0	0		ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.79730224609375	2	450.797478	899.580402	1.1097	0.00050025	-0.77213	-0.00034807	0.33757	0.00015217	450.7969046720928	33.739	0.53772	34.044	33.745	34.282	0.30495					35	12	4	0	0	0	0.94135	1	2476	2476		54.776	6.8607	1	663500			20697	6988	13985	13995	23926	23926					0.12659538690900263
KIIQWKKVSRW	11	Unmodified	_KIIQWKKVSRW_					0	0	0			REV__ENSG00000215262|ENST00000399881|KCNU1	REV__ENSG00000215262|ENST00000399881|KCNU1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.6329650878906	3	491.301389	1470.88234	-0.76352	-0.00037512	-3.6401	-0.0017884	-4.4036	-0.0021635	491.2995386028914	111.52	0.67294	111.52	111.3	111.98	0					49	24	3	0	0	0	0.80593	1	11612	11612		10.104	4.1029	1	27267	+		20698	23680	13986	13996	23927	23927					0.16573259710253296
KIITEGTKLKI	11	Unmodified	_KIITEGTKLKI_					0	0	0		nc|ENSG00000080839|P28749-2|RBL1;ENSG00000080839|ENST00000373664|RBL1	nc|ENSG00000080839|P28749-2|RBL1	nc|ENSG00000080839|P28749-2|RBL1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.8458862304688	2	622.402838	1242.79112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.633	1	79.576	79.076	80.076	-0.056503								0	0	0	0.56276	1	7977	7977		21.686	2.5822	1				20699	1453	13987	13997	23928	23928					0.17943951222264332
KIIVPPLKKSM	11	Unmodified	_KIIVPPLKKSM_					0	0	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.6039123535156	3	418.60531	1252.7941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.239	1	50.216	49.716	50.716	-0.02343								0	0	0	0.56276	1	4341	4341		20.315	4.3944	1		+		20700	16148	13988	13998	23929	23929					0.17781503075434557
KIKAFLSH	8	Unmodified	_KIKAFLSH_					0	0	0		ENSG00000174607|ENST00000310836|UGT8	ENSG00000174607|ENST00000310836|UGT8	ENSG00000174607|ENST00000310836|UGT8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2876281738281	2	472.28982	942.565087	-0.108	-5.1006E-05	-4.4569	-0.0021049	-4.5649	-0.0021559	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.87922	1	10095	10095		31.955	0.42505	1	46909000			20701	6951	13989	13999	23930	23930					0.09150671893701201
KIKDSFGN	8	Unmodified	_KIKDSFGN_					0	0	0			REV__ENST00000565356.5_1_16:68349816-68386396:+|nuORF	REV__ENST00000565356.5_1_16:68349816-68386396:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.74481201171875	2	454.745442	907.476331	2.7644	0.0012571	-3.8708	-0.0017602	-1.1064	-0.00050315	454.74355172728065	103.83	1.5253	103.79	103.16	104.69	-0.043755					91	36	4	0	0	0	0.8537	1	11423	11423		25.574	1.3713	1	836250	+		20702	19015	13990	14000	23931	23931					0.01889211863374385
KIKDTTRAV	9	Unmodified	_KIKDTTRAV_					0	0	0			REV__chr7:77711482-77736410|19|21.68|0.17|6.97|+|2|TE_info:AluJr4,AluJr4_dup8455,Alu,SINE,donor,-,77711326,77711482|None,RSBN1L|2	REV__chr7:77711482-77736410|19|21.68|0.17|6.97|+|2|TE_info:AluJr4,AluJr4_dup8455,Alu,SINE,donor,-,77711326,77711482|None,RSBN1L|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3117065429688	2	516.314023	1030.61349	0.96653	0.00049903	-1.1711	-0.00060464	-0.20454	-0.0001056	516.3133887311924	32.644	2.0073	32.856	32.593	34.6	0.21168					79	47	2	0	0	0	0.77244	1	2342	2342		32.812	0	1	535970	+		20703	15912	13991	14001	23932	23932					0.09941120742905696
KIKEKGLSERR	11	Unmodified	_KIKEKGLSERR_					0	0	0			REV__ENST00000341154.10_1_1:24304473-24304647:-|nuORF	REV__ENST00000341154.10_1_1:24304473-24304647:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.6090087890625	3	448.60877	1342.80448	-1.5058	-0.00067553	2.9369	0.0013175	1.4311	0.00064199	448.60991279607794	80.141	1.0395	80.246	79.789	80.828	0.10527					80	33	3	0	0	0	0.77511	1	7571	7571		16.53	2.4438	1	197830	+		20704	25255	13992	14002	23933	23933					0.14679202054185225
KIKFLFVM	8	Unmodified	_KIKFLFVM_					0	0	0			REV__ENST00000553924.5_1_14:65879917-65922398:+|nuORF	REV__ENST00000553924.5_1_14:65879917-65922398:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.320556640625	2	513.314449	1024.61435	-0.40505	-0.00020792	4.4834	0.0023014	4.0783	0.0020935	513.3166290585863	43.201	1.1169	43.206	42.933	44.05	0.0057487					65	27	3	0	0	0	0.87276	1	3045	3045		29.842	9.3597	1	350060	+		20705	25484	13993	14003	23934	23934					0.10302243858268412
KIKGKNKDS	9	Unmodified	_KIKGKNKDS_					0	0	0		ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-2|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.30615234375	2	509.306198	1016.59784	-0.05438	-2.7696E-05	-0.76453	-0.00038938	-0.81891	-0.00041707	509.3056675667054	93.221	1.5935	93.291	92.756	94.349	0.06987					113	37	4	0	0	0	0.78058	2	9631	9631;9739		30.504	4.4919	1	2872400			20706	5388	13994	14004	23935;23936	23935					0.09020834225884755
KIKGKNKDS	9	Unmodified	_KIKGKNKDS_					0	0	0		ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-2|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.3060607910156	2	509.306198	1016.59784	1.9599	0.00099817	-2.8037	-0.0014279	-0.84383	-0.00042977	509.30464157571356	93.196	1.6755	93.134	92.591	94.267	-0.06144					130	39	5	0	0	0	0.7932	1	9924	9924		26.693	4.733	1	3032400			20707	5388	13994	14004	23937	23937					0.09020834225884755
KIKGKNKDS	9	Unmodified	_KIKGKNKDS_					0	0	0		ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-2|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.3061828613281	2	509.306198	1016.59784	0.38214	0.00019463	-1.238	-0.0006305	-0.85582	-0.00043587	509.30545060509706	93	1.7659	93.046	92.369	94.135	0.045448					129	41	4	0	0	0	0.7932	1	9806	9806		26.693	0	1	3009900			20708	5388	13994	14004	23938	23938					0.09020834225884755
KIKHILLLGV	10	Unmodified	_KIKHILLLGV_					0	0	0		ENST00000397033.6_1_2:182386922-182386958:+|nuORF	ENST00000397033.6_1_2:182386922-182386958:+|nuORF	ENST00000397033.6_1_2:182386922-182386958:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.329833984375	2	567.392077	1132.7696	-1.2025	-0.00068231	-3.4684	-0.001968	-4.671	-0.0026503	567.3901774851519	92.622	0.21475	92.692	92.584	92.799	0.06987					8	4	2	0	0	0	0.37624	1	9597	9597		3.41	0	1	87910			20709	11133	13995	14005	23939	23939					0.20852610984206876
KIKHILLLGV	10	Unmodified	_KIKHILLLGV_					0	0	0		ENST00000397033.6_1_2:182386922-182386958:+|nuORF	ENST00000397033.6_1_2:182386922-182386958:+|nuORF	ENST00000397033.6_1_2:182386922-182386958:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3299560546875	2	567.392077	1132.7696	1.82	0.0010326	0.10531	5.9752E-05	1.9253	0.0010924	567.3921194184744	92.541	0.21369	92.477	92.375	92.589	-0.06414					6	4	2	0	0	0	0.37624	1	9778	9778		3.1592	0	1	40915			20710	11133	13995	14005	23940	23940					0.20852610984206876
KIKKDELKKS	10	Unmodified	_KIKKDELKKS_					0	0	0		ENSG00000077312|ENST00000243563|SNRPA;chr19:40750937-40751387|62|29.68|0.99|4.9|+|ENST00000597353|SNRPA,SNRPA;ENST00000598923.1_1_19:41257313-41268988:+|nuORF	ENSG00000077312|ENST00000243563|SNRPA	ENSG00000077312|ENST00000243563|SNRPA	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.25860595703125	3	406.258967	1215.75507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.872	1	64.998	64.498	65.498	0.12545								0	0	0	0.45132	1	5733	5733		20.837	3.004	1				20711	1379	13996	14006	23941	23941					0.15582494045429485
KIKLHLKWRYV	11	Unmodified	_KIKLHLKWRYV_					0	0	0			REV__ENST00000359568.9_1_21:47865495-47865651:+|nuORF	REV__ENST00000359568.9_1_21:47865495-47865651:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	495.3152160644531	3	495.313518	1482.91872	0.75485	0.00037389	3.135	0.0015528	3.8898	0.0019267	495.31504027907846	15.458	0.16022	15.434	15.325	15.485	-0.024207					7	4	2	0	0	0	0.7896	1	38	38		13.508	0.55046	1	88953	+		20712	25462	13997	14007	23942	23942					0.1965813660697222
KIKMRKQYKKK	11	Unmodified	_KIKMRKQYKKK_					0	0	0			REV__ENSG00000124383|ENST00000244230|MPHOSPH10	REV__ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.6502380371094	3	493.649913	1477.92791	-1.6053	-0.00079248	0.8659	0.00042745	-0.73944	-0.00036502	493.6501931782481	44.56	1.836	44.56	43.623	45.459	0					138	44	4	0	0	0	0.80813	1	3266	3266		9.6461	3.6451	1	434870	+		20713	18582	13998	14008	23943	23943					0.2080616190096407
KIKMRKQYKKK	11	Unmodified	_KIKMRKQYKKK_					0	0	0			REV__ENSG00000124383|ENST00000244230|MPHOSPH10	REV__ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.649169921875	3	493.649913	1477.92791	-0.87643	-0.00043265	0.36324	0.00017931	-0.5132	-0.00025334	493.64998188310005	44.669	3.6346	44.636	43.623	47.257	-0.033474					240	86	4	0	0	0	0.8498	1	3547	3547		6.001	2.5923	1	495450	+		20714	18582	13998	14008	23944	23944					0.2080616190096407
KIKMRKQYKKK	11	Unmodified	_KIKMRKQYKKK_					0	0	0			REV__ENSG00000124383|ENST00000244230|MPHOSPH10	REV__ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.9834899902344	3	493.649913	1477.92791	-2.0219	-0.0009981	1.2293	0.00060684	-0.79259	-0.00039126	493.6504107120104	44.606	1.8952	44.602	43.855	45.75	-0.0041618					105	44	3	0	0	0	0.85439	1	3536	3536		5.6988	2.4875	1	507660	+		20715	18582	13998	14008	23945	23945					0.2080616190096407
KIKMRKQYKKK	11	Unmodified	_KIKMRKQYKKK_					0	0	0			REV__ENSG00000124383|ENST00000244230|MPHOSPH10	REV__ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.6501159667969	3	493.649913	1477.92791	0.28936	0.00014284	-0.79527	-0.00039258	-0.50591	-0.00024974	493.6493656295497	44.418	1.6555	44.467	43.631	45.286	0.048996					106	39	4	0	0	0	0.88916	1	3152	3152		3.4087	0	1	509790	+		20716	18582	13998	14008	23946	23946					0.2080616190096407
KIKNLAKMVAM	11	Unmodified	_KIKNLAKMVAM_					0	0	0			REV__ENSG00000162927|ENST00000316752|PUS10	REV__ENSG00000162927|ENST00000316752|PUS10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.8713989257812	2	623.872336	1245.73012	-0.065768	-4.1031E-05	-2.9654	-0.00185	-3.0311	-0.001891	623.8703810158217	104.89	2.4155	104.89	104.43	106.84	0					131	56	4	0	0	0	0.75495	1	10804	10804		20.947	2.6848	1	1348200	+		20717	20864	13999	14009	23947	23947					0.1170839964681818
KIKPGASL	8	Unmodified	_KIKPGASL_					0	0	0		ENST00000462377.1_1_3:51663425-51664469:+|nuORF	ENST00000462377.1_1_3:51663425-51664469:+|nuORF	ENST00000462377.1_1_3:51663425-51664469:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2958984375	2	407.263271	812.511988	-0.078401	-3.193E-05	4.1994	0.0017103	4.121	0.0016784	407.26479529240845	36.045	0.74289	35.985	35.646	36.389	-0.060337					33	20	2	0	0	0	0.4196	1	1945	1945		17.365	3.5896	1	74917			20718	12040	14000	14010	23948	23948					0.09823294111038194
KIKPGASL	8	Unmodified	_KIKPGASL_					0	0	0		ENST00000462377.1_1_3:51663425-51664469:+|nuORF	ENST00000462377.1_1_3:51663425-51664469:+|nuORF	ENST00000462377.1_1_3:51663425-51664469:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	407.263271	812.511988	-1.9376	-0.00078912	5.7346	0.0023355	3.7969	0.0015464	407.26549435241407	36.083	0.67808	36.083	35.879	36.557	0	-0.028226	0.0016041	NaN	17.365	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42913			20719	12040	14000	14010							0.09823294111038194
KIKPGASL	8	Unmodified	_KIKPGASL_					0	0	0		ENST00000462377.1_1_3:51663425-51664469:+|nuORF	ENST00000462377.1_1_3:51663425-51664469:+|nuORF	ENST00000462377.1_1_3:51663425-51664469:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	407.263271	812.511988	-0.88765	-0.00036151	4.6516	0.0018944	3.7639	0.0015329	407.26504747480664	36.162	1.7464	36.106	35.788	37.534	-0.055901	-0.0052164	0.00072194	NaN	17.365	65	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	204600			20720	12040	14000	14010							0.09823294111038194
KIKPGASL	8	Unmodified	_KIKPGASL_					0	0	0		ENST00000462377.1_1_3:51663425-51664469:+|nuORF	ENST00000462377.1_1_3:51663425-51664469:+|nuORF	ENST00000462377.1_1_3:51663425-51664469:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	407.263271	812.511988	-1.9096	-0.00077773	5.8572	0.0023854	3.9476	0.0016077	407.26558557859937	36.14	0.90087	36.171	35.799	36.7	0.031132	0.060054	0.001704	NaN	17.365	39	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100870			20721	12040	14000	14010							0.09823294111038194
KIKPGASL	8	Unmodified	_KIKPGASL_					0	0	0		ENST00000462377.1_1_3:51663425-51664469:+|nuORF	ENST00000462377.1_1_3:51663425-51664469:+|nuORF	ENST00000462377.1_1_3:51663425-51664469:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	407.263271	812.511988	0.14944	6.0863E-05	3.5759	0.0014563	3.7254	0.0015172	407.26466800755753	35.918	0.5974	36.021	35.748	36.346	0.10306	-0.090214	-0.00015421	NaN	17.365	34	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110760			20722	12040	14000	14010							0.09823294111038194
KIKPGKVC	8	Unmodified	_KIKPGKVC_					0	0	0			REV__ENST00000370994.8_2_1:67877890-67877929:-|nuORF	REV__ENST00000370994.8_2_1:67877890-67877929:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7747802734375	2	436.772948	871.531344	1.4332	0.00062597	2.8008	0.0012233	4.234	0.0018493	436.7740845812963	90.925	2.5794	90.858	90.135	92.715	-0.067085					212	61	5	0	0	0	0.884	1	9649	9649		33.516	5.2613	1	18772000	+		20723	25676	14001	14011	23949	23949					0.0904392713028983
KIKPGLHSF	9	Unmodified	_KIKPGLHSF_					0	0	0		ENSG00000147894|ENST00000380003|C9orf72	ENSG00000147894|ENST00000380003|C9orf72	ENSG00000147894|ENST00000380003|C9orf72	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8075561523438	2	513.808377	1025.6022	0.34332	0.0001764	0.75485	0.00038785	1.0982	0.00056425	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.7932	1	3599	3599		24.203	1.166	1	1306000			20724	4928	14002	14012	23950	23950					0.0904234343945518
KIKQILLEW	9	Unmodified	_KIKQILLEW_					0	0	0			REV__ENST00000199940.10_2_2:210372350-210489846:+|nuORF	REV__ENST00000199940.10_2_2:210372350-210489846:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.8668212890625	2	585.865892	1169.71723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.713	1	24.385	23.885	24.885	-0.32825								0	0	0	0.33676	1	1212	1212		18.324	0.8564	1		+		20725	24094	14003	14013	23951	23951					0.1391602785060968
KIKQMLVPHG	10	Unmodified	_KIKQMLVPHG_					0	0	0		ENSG00000204569|ENST00000376511|PPP1R10	ENSG00000204569|ENST00000376511|PPP1R10	ENSG00000204569|ENST00000376511|PPP1R10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8425903320312	2	575.841894	1149.66923	0.78302	0.0004509	1.062	0.00061152	1.845	0.0010624	575.8423757005949	90.383	2.7025	90.537	88.725	91.427	0.15388					214	64	4	0	0	0	0.86589	1	9142	9142		29.15	2.4566	1	2399100			20726	8460	14004	14014	23952	23952					0.10038630658891634
KIKQYINYG	9	Unmodified	_KIKQYINYG_					0	0	0		ENST00000452400.6_1_8:71022261-71022342:-|nuORF	ENST00000452400.6_1_8:71022261-71022342:-|nuORF	ENST00000452400.6_1_8:71022261-71022342:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.8167724609375	2	563.816399	1125.61824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.196	1	57.184	56.684	57.684	-0.012203								0	0	0	0.32469	1	5159	5159		21.96	1.013	1				20727	11918	14005	14015	23953	23953					0.06046004885683942
KIKSRVLMTPL	11	Unmodified	_KIKSRVLMTPL_					0	0	0		ENSG00000146285|ENST00000369020|SCML4	ENSG00000146285|ENST00000369020|SCML4	ENSG00000146285|ENST00000369020|SCML4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4053955078125	2	643.404858	1284.79516	-0.02708	-1.7423E-05	1.6454	0.0010587	1.6184	0.0010413	643.4057840301668	105.94	1.5968	105.91	105.23	106.82	-0.025146					165	37	6	0	0	0	0.66929	1	11587	11587		36.447	2.5251	1	14580000			20728	4835	14006	14016	23954	23954					0.16415717444351685
KILALVPE	8	Unmodified	_KILALVPE_					0	0	0		ENST00000439523.1_1_1:247206770-247206917:+|nuORF;ENSG00000198056|ENST00000338193|PRIM1	ENST00000439523.1_1_1:247206770-247206917:+|nuORF	ENST00000439523.1_1_1:247206770-247206917:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7867736816406	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.80706	1	3409	3409		19.36	4.6959	1	4170800			20729	8231	14007	14017	23955	23955					0.11308733942325944
KILARESE	8	Unmodified	_KILARESE_					0	0	0		ENST00000274680.8_1_6:5261799-5368856:+|nuORF	ENST00000274680.8_1_6:5261799-5368856:+|nuORF	ENST00000274680.8_1_6:5261799-5368856:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.27197265625	2	473.271824	944.529095	-0.88548	-0.00041907	1.3329	0.00063083	0.44744	0.00021176	473.2725333299319	30.232	0.61892	30.261	30.008	30.627	0.028618					22	13	2	0	0	0	0.92457	1	1973	1973		47.916	1.9636	1	100190			20730	9589	14008	14018	23956	23956					0.05461169926184084
KILARESE	8	Unmodified	_KILARESE_					0	0	0		ENST00000274680.8_1_6:5261799-5368856:+|nuORF	ENST00000274680.8_1_6:5261799-5368856:+|nuORF	ENST00000274680.8_1_6:5261799-5368856:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	473.271824	944.529095	-0.66508	-0.00031476	0.17474	8.27E-05	-0.49034	-0.00023206	473.27151304108605	30.349	0.69899	30.29	29.991	30.69	-0.059166	0.014507	-0.00078391	NaN	47.916	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115570			20731	9589	14008	14018							0.05461169926184084
KILDSRESF	9	Unmodified	_KILDSRESF_					0	0	0			REV__ENSG00000125945|ENST00000314011|ZNF436	REV__ENSG00000125945|ENST00000314011|ZNF436	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.793212890625	2	547.795663	1093.57677	-0.22899	-0.00012544	3.6645	0.0020074	3.4355	0.0018819	547.7973659105132	77.222	0.92695	77.79	77.453	78.38	0.56836					31	21	2	0	0	0	0.20789	1	8780	8780		31.53	14.165	1	229750	+		20732	18683	14009	14019	23957	23957					0.03372824126381602
KILEKTSG	8	Unmodified	_KILEKTSG_					0	0	0			REV__ENST00000515015.1_1_5:140038902-140040409:+|nuORF	REV__ENST00000515015.1_1_5:140038902-140040409:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2618103027344	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.87064	1	2968	2968		29.15	0	1	21381000	+		20733	28023	14010	14020	23958	23958					0.07010669040244011
KILETWGPL	9	Unmodified	_KILETWGPL_					0	0	0		ENST00000545932.5_1_12:108958067-108958157:+|nuORF	ENST00000545932.5_1_12:108958067-108958157:+|nuORF	ENST00000545932.5_1_12:108958067-108958157:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.79296875	2	528.808042	1055.60153	1.6198	0.00085658	-1.1922	-0.00063044	0.42765	0.00022614	529.3098787768597	36.202	0.85576	36.643	36.259	37.115	0.44043					27	20	2	0	0	0	0.20789	1	2825	2825		21.96	9.753	1	48517			20734	13582	14011	14021	23959	23959					0.075955039997325
KILHGIFKLW	10	Unmodified	_KILHGIFKLW_					0	0	0		ENST00000510994.5_1_3:134196877-134196976:-|nuORF	ENST00000510994.5_1_3:134196877-134196976:-|nuORF	ENST00000510994.5_1_3:134196877-134196976:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2976989746094	3	418.928893	1253.76485	-0.058724	-2.4601E-05	-0.857	-0.00035902	-0.91572	-0.00038362	418.92862098139227	70.904	0.12439	71.451	71.366	71.491	0.54756					4	2	2	0	0	0	0.37624	1	7903	7903		16.007	0	1	20468			20735	13012	14012	14022	23960	23960					0.14811726841480777
KILHIKVE	8	Unmodified	_KILHIKVE_					0	0	0		ENSG00000163013|ENST00000520530|FBXO41	ENSG00000163013|ENST00000520530|FBXO41	ENSG00000163013|ENST00000520530|FBXO41	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.1544189453125	2	490.318577	978.622602	-0.70779	-0.00034704	0.94475	0.00046323	0.23697	0.00011619	490.31882719750996	27.124	1.1039	26.948	26.613	27.717	-0.17559					62	24	4	0	0	0	0.4196	1	1634	1634		12.207	0.69583	1	1192900			20736	5757	14013	14023	23961	23961					0.1324351409926976
KILKAELP	8	Unmodified	_KILKAELP_					0	0	0			REV__ENSG00000165182|ENST00000379211|CXorf58	REV__ENSG00000165182|ENST00000379211|CXorf58	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7917175292969	2	456.299853	910.585153	-1.235	-0.00056351	3.6061	0.0016455	2.3712	0.001082	456.3013994911932	51.627	1.743	51.662	51.285	53.028	0.034588					86	53	2	0	0	0	0.4196	1	4163	4163		18.324	14.339	1	126510	+		20737	21158	14014	14024	23962	23962					0.1262842283365444
KILKAELP	8	Unmodified	_KILKAELP_					0	0	0			REV__ENSG00000165182|ENST00000379211|CXorf58	REV__ENSG00000165182|ENST00000379211|CXorf58	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	456.299853	910.585153	-0.48016	-0.00021909	3.1589	0.0014414	2.6787	0.0012223	456.30113541799346	51.981	1.2072	51.897	51.431	52.638	-0.084534	0.096408	-0.00030939	NaN	7.1934	67	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118070	+		20738	21158	14014	14024							0.1262842283365444
KILKKLSMYQ	10	Unmodified	_KILKKLSMYQ_					0	0	0		nc|ENSG00000134627|Q7Z3Z4-3|PIWIL4;nc|ENSG00000134627|Q7Z3Z4-2|PIWIL4;ENSG00000134627|ENST00000299001|PIWIL4	nc|ENSG00000134627|Q7Z3Z4-3|PIWIL4	nc|ENSG00000134627|Q7Z3Z4-3|PIWIL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.379638671875	2	626.378309	1250.74206	-0.23069	-0.0001445	1.1488	0.00071957	0.91809	0.00057507	626.3789495998162	107.88	0.52493	107.84	107.4	107.93	-0.042404					39	12	4	0	0	0	0.73395	1	11728	11728		42.864	8.6917	1	14990000			20739	3949	14015	14025	23963	23963					0.1267233966166259
KILNQLQPLNS	11	Unmodified	_KILNQLQPLNS_					0	0	0			REV__ENSG00000198301|ENST00000356260|SDAD1	REV__ENSG00000198301|ENST00000356260|SDAD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.376953125	2	634.372069	1266.72959	6.6614	0.0042258	1.1149	0.00070728	7.7763	0.0049331	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.73893	1	13413	13413		24.519	0	1	7041100	+		20740	23315	14016	14026	23964	23964					0.10689019523010757
KILNQLQPLNS	11	Unmodified	_KILNQLQPLNS_					0	0	0			REV__ENSG00000198301|ENST00000356260|SDAD1	REV__ENSG00000198301|ENST00000356260|SDAD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3765869140625	2	634.372069	1266.72959	6.8453	0.0043425	1.4826	0.0009405	8.3279	0.005283	634.3730039069684	117.9	1.1075	117.8	117.39	118.5	-0.10152					70	51	2	0	0	0	0.78658	1	14050	14050		14.137	0	1	39724	+		20741	23315	14016	14026	23965	23965					0.10689019523010757
KILPLLET	8	Unmodified	_KILPLLET_					0	0	0			REV__nc|ENSG00000159228|P16152-2|CBR1	REV__nc|ENSG00000159228|P16152-2|CBR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.800048828125	2	463.799686	925.584819	-1.1343	-0.00052608	3.785	0.0017555	2.6507	0.0012294	463.8012667988253	46.183	0.63174	46.199	45.791	46.422	0.015514					31	18	2	0	0	0	0.79929	1	3377	3377		18.324	1.8513	1	155340	+		20742	20646	14017	14027	23966	23966					0.11905003113804469
KILRDGPKLRG	11	Unmodified	_KILRDGPKLRG_					0	0	0			REV__nc|ENSG00000163629|Q12923-2|PTPN13	REV__nc|ENSG00000163629|Q12923-2|PTPN13	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.2646179199219	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.34	1	48.34	47.84	48.84	0								0	0	0	0.56276	1	3746	3746		24.232	4.2013	1		+		20743	20947	14018	14028	23967	23967					0.16172138233696387
KILREKKILEF	11	Unmodified	_KILREKKILEF_					0	0	0		ENST00000399417.3_1_X:106595227-106595875:-|nuORF	ENST00000399417.3_1_X:106595227-106595875:-|nuORF	ENST00000399417.3_1_X:106595227-106595875:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.9707336425781	3	472.969417	1415.88642	0.051384	2.4303E-05	3.1198	0.0014756	3.1712	0.0014999	472.97087077601634	49.142	2.3722	49.137	48.43	50.803	-0.0056381					193	58	5	0	0	0	0.81021	2	4148	4148;4161		9.2118	0.41249	1	1340700			20744	11205	14019	14029	23968;23969	23968					0.19511304413299513
KILREKKILEF	11	Unmodified	_KILREKKILEF_					0	0	0		ENST00000399417.3_1_X:106595227-106595875:-|nuORF	ENST00000399417.3_1_X:106595227-106595875:-|nuORF	ENST00000399417.3_1_X:106595227-106595875:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.9707946777344	3	472.969417	1415.88642	-0.99152	-0.00046896	4.3588	0.0020616	3.3673	0.0015926	472.9714128496593	48.869	1.9906	48.895	48.114	50.105	0.025574					169	50	5	0	0	0	0.74002	2	3738	3738;3761		24.276	6.4428	1	1653800			20745	11205	14019	14029	23970;23971	23970					0.19511304413299513
KILREKKILEF	11	Unmodified	_KILREKKILEF_					0	0	0		ENST00000399417.3_1_X:106595227-106595875:-|nuORF	ENST00000399417.3_1_X:106595227-106595875:-|nuORF	ENST00000399417.3_1_X:106595227-106595875:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.9711608886719	3	472.969417	1415.88642	-0.32273	-0.00015264	3.6752	0.0017383	3.3525	0.0015856	472.97110855573317	48.963	2.2671	48.87	48.252	50.519	-0.093182					180	57	5	0	0	0	0.79476	2	3836	3769;3836		12.433	2.7867	1	1641600			20746	11205	14019	14029	23972;23973	23973					0.19511304413299513
KILRFSSPIF	10	Unmodified	_KILRFSSPIF_					0	0	0		ENSG00000091137|ENST00000644269|SLC26A4;ENST00000492030.2_1_7:107340545-107353003:+|nuORF;nc|ENSG00000091137|O43511-2|SLC26A4	ENSG00000091137|ENST00000644269|SLC26A4	ENSG00000091137|ENST00000644269|SLC26A4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3705444335938	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.72	1	114.7	114.2	115.2	-0.024452								0	0	0	0.45132	1	12714	12714		5.9211	0	1				20747	1669	14020	14030	23974	23974					0.11739143707836774
KILRKSPHLEK	11	Unmodified	_KILRKSPHLEK_					0	0	0		ENSG00000037474|ENST00000264670|NSUN2;nc|ENSG00000037474|Q08J23-2|NSUN2	ENSG00000037474|ENST00000264670|NSUN2	ENSG00000037474|ENST00000264670|NSUN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.6158447265625	3	450.285628	1347.83505	-1.3216	-0.00059511	-3.232	-0.0014553	-4.5536	-0.0020504	450.28398922741826	55.141	0.82828	55.205	54.909	55.737	0.063725					41	25	2	0	0	0	0.17966	1	4576	4576		19.627	3.0971	1	199240			20748	908	14021	14031	23975	23975					0.17504980439230167
KILRKSPHLEK	11	Unmodified	_KILRKSPHLEK_					0	0	0		ENSG00000037474|ENST00000264670|NSUN2;nc|ENSG00000037474|Q08J23-2|NSUN2	ENSG00000037474|ENST00000264670|NSUN2	ENSG00000037474|ENST00000264670|NSUN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	450.285628	1347.83505	-0.09621	-4.3322E-05	-4.792	-0.0021578	-4.8882	-0.0022011	450.2833005675004	55.145	0.96545	55.138	54.906	55.872	-0.0077095	0.030504	-0.0010631	NaN	17.722	39	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120050			20749	908	14021	14031							0.17504980439230167
KILRKSPHLEK	11	Unmodified	_KILRKSPHLEK_					0	0	0		ENSG00000037474|ENST00000264670|NSUN2;nc|ENSG00000037474|Q08J23-2|NSUN2	ENSG00000037474|ENST00000264670|NSUN2	ENSG00000037474|ENST00000264670|NSUN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	450.285628	1347.83505	-0.61097	-0.00027511	-4.0194	-0.0018099	-4.6304	-0.002085	450.28382295723827	55.028	1.1306	54.979	54.684	55.815	-0.049274	-0.12812	-1.9461E-05	NaN	17.722	57	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	222800			20750	908	14021	14031							0.17504980439230167
KILSTARNQ	9	Unmodified	_KILSTARNQ_					0	0	0		chrX:70286768-70287732|22|15.45|0.09|7.35|-|1|None,PDZD11|1	chrX:70286768-70287732|22|15.45|0.09|7.35|-|1|None,PDZD11|1	chrX:70286768-70287732|22|15.45|0.09|7.35|-|1|None,PDZD11|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8033447265625	2	515.803823	1029.59309	0.99159	0.00051147	-1.0995	-0.00056714	-0.10793	-5.5671E-05	515.8030952914191	22.982	0.88607	22.563	22.23	23.116	-0.41879					49	20	4	0	0	0	0.11055	2	975	966;975		90.37	4.1622	1	541750			20751	553	14022	14032	23976;23977	23977					0.07947950083121214
KILTHLQSAS	10	Unmodified	_KILTHLQSAS_					0	0	0			REV__ENSG00000258873|ENST00000554048|DUXA	REV__ENSG00000258873|ENST00000554048|DUXA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3175048828125	2	549.319306	1096.62406	0.85078	0.00046735	-3.9097	-0.0021477	-3.0589	-0.0016803	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.86587	1	10555	10555		29.17	3.596	1	2023500	+		20752	23931	14023	14033	23978	23978					0.0796110339738334
KILTHLQSAS	10	Unmodified	_KILTHLQSAS_					0	0	0			REV__ENSG00000258873|ENST00000554048|DUXA	REV__ENSG00000258873|ENST00000554048|DUXA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3180541992188	2	549.319306	1096.62406	-1.4544	-0.00079891	-1.5897	-0.00087326	-3.0441	-0.0016722	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.86802	1	10518	10518		27.047	0	1	2310400	+		20753	23931	14023	14033	23979	23979					0.0796110339738334
KILVKGKKLTL	11	Unmodified	_KILVKGKKLTL_					0	0	0		ENST00000483685.5_1_2:219487553-219498591:+|nuORF;ENST00000459791.5_1_2:219494200-219498591:+|nuORF;ENST00000473443.5_1_2:219483577-219498591:+|nuORF;ENSG00000115556|ENST00000450993|PLCD4	ENST00000483685.5_1_2:219487553-219498591:+|nuORF	ENST00000483685.5_1_2:219487553-219498591:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.0214233398438	2	620.939391	1239.86423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.051	1	56.114	55.614	56.614	0.063725								0	0	0	0.56276	1	4719	4719		8.6937	0	1				20754	2855	14024	14034	23980	23980					0.25389124735556834
KILVLHLKR	9	Unmodified	_KILVLHLKR_					0	0	0		nc|ENSG00000036672|O75604-2|USP2;nc|ENSG00000036672|O75604-3|USP2;nc|ENSG00000036672|O75604-4|USP2;ENSG00000036672|ENST00000260187|USP2	nc|ENSG00000036672|O75604-2|USP2	nc|ENSG00000036672|O75604-2|USP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.34033203125	2	560.389868	1118.76518	3.1344	0.0017565	1.5022	0.00084179	4.6366	0.0025983	560.3908292389831	102.23	0.44284	102.18	102.01	102.45	-0.049835					16	10	3	0	0	0	0.20789	1	11139	11139		10.866	0	1	242350			20755	905	14025	14035	23981	23981					0.21055146561320726
KILVLHLKR	9	Unmodified	_KILVLHLKR_					0	0	0		nc|ENSG00000036672|O75604-2|USP2;nc|ENSG00000036672|O75604-3|USP2;nc|ENSG00000036672|O75604-4|USP2;ENSG00000036672|ENST00000260187|USP2	nc|ENSG00000036672|O75604-2|USP2	nc|ENSG00000036672|O75604-2|USP2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	560.389868	1118.76518	0.86184	0.00048297	7.2787	0.0040789	8.1406	0.0045619	560.3932356905834	102.07	0.24429	102.2	101.98	102.22	0.13523	-0.064083	0.0025832	NaN	10.866	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	247960			20756	905	14025	14035							0.21055146561320726
KILVVIEPLLI	11	Unmodified	_KILVVIEPLLI_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2892150878906	3	417.287975	1248.8421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.097	1	73.139	72.639	73.639	0.042114								0	0	0	0.56276	1	7053	7053		10.104	0	1				20757	2851	14026	14036	23982	23982					0.22762900267116493
KIMGKENLE	9	Unmodified	_KIMGKENLE_					0	0	0		ENSG00000138823|ENST00000265517|MTTP;nc|ENSG00000138823|P55157-2|MTTP	ENSG00000138823|ENST00000265517|MTTP	ENSG00000138823|ENST00000265517|MTTP	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2860717773438	2	531.286617	1060.55868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.907	1	55.475	54.975	55.975	0.56836								0	0	0	2.3366E-05	1	5628	5628		122.18	20.575	1				20758	4339	14027	14037	23983	23983					0.03082365880004545
KIMKDILEKK	10	Unmodified	_KIMKDILEKK_					0	0	0		ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.92486572265625	3	415.92482	1244.75263	-0.1002	-4.1678E-05	0.25009	0.00010402	0.14989	6.2341E-05	415.9248786709585	28.616	1.3458	28.579	27.989	29.335	-0.037411					80	31	4	0	0	0	0.00065674	3	1736	1724;1736;1748		139.38	26.286	1	965320			20759	1452	14028	14038	23984;23985;23986	23985					0.14004322316077378
KIMKDILEKK	10	Unmodified	_KIMKDILEKK_					0	0	0		ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.92486572265625	3	415.92482	1244.75263	0.81946	0.00034083	-0.72183	-0.00030023	0.097637	4.061E-05	415.9244752331545	28.792	0.95755	28.618	28.02	28.977	-0.17336					75	23	4	0	0	0	0.018628	3	1761	1761;1784;1797		123.11	24.099	1	1055100			20760	1452	14028	14038	23987;23988;23989	23987					0.14004322316077378
KIMSFVAH	8	Unmodified	_KIMSFVAH_					0	0	0			REV__ENSG00000137561|ENST00000260116|TTPA	REV__ENSG00000137561|ENST00000260116|TTPA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.29034423828125	2	466.754756	931.494958	0.69278	0.00032336	-2.9104	-0.0013585	-2.2176	-0.0010351	466.75289438388126	33.404	0.79303	33.616	33.355	34.148	0.21168					23	18	2	0	0	0	0.4196	1	2401	2401		37.159	10.363	1	91539	+		20761	19391	14029	14039	23990	23990					0.026470502335882884
KINEDMRL	8	Unmodified	_KINEDMRL_					0	0	0		nc|ENSG00000113522|Q92878-2|RAD50;ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-3|RAD50	nc|ENSG00000113522|Q92878-2|RAD50	nc|ENSG00000113522|Q92878-2|RAD50	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.77099609375	2	509.771134	1017.52771	0.87163	0.00044433	-1.3369	-0.00068153	-0.46531	-0.0002372	509.77049105890745	18.079	0.57489	17.457	17.101	17.676	-0.62141					25	13	2	0	0	0	0.88185	1	356	356		32.812	2.4947	1	119220			20762	2726	14030	14040	23991	23991					0.019652125657898978
KINEVTRKLH	10	Unmodified	_KINEVTRKLH_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.3718872070312	2	619.372404	1236.73025	0.60184	0.00037276	-0.93131	-0.00057683	-0.32947	-0.00020406	619.3721424545147	101.51	1.6945	101.55	101.22	102.91	0.044823					109	40	4	0	0	0	0.85981	1	10961	10961		35.152	1.2304	1	2715800	+		20763	23196	14031	14041	23992	23992					0.12135858962687962
KINILLQTY	9	Unmodified	_KINILLQTY_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3316040039062	2	553.334424	1104.6543	-1.4414	-0.00079758	-3.6469	-0.0020179	-5.0883	-0.0028155	553.3320877595116	98.61	0.57079	98.805	98.555	99.126	0.19585					16	12	2	0	0	0	0.7932	1	10175	10175		21.96	1.9631	1	61723			20764	2646	14032	14042	23993	23993					0.10615462062582992
KINKCSVR	8	Unmodified	_KINKCSVR_					0	0	0			REV__nc|ENSG00000090539|Q9H2X0-5|CHRD	REV__nc|ENSG00000090539|Q9H2X0-5|CHRD	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.77203369140625	2	474.276386	946.53822	-0.54711	-0.00025948	-2.7728	-0.0013151	-3.3199	-0.0015745	474.2747772798021	27.5	1.0813	27.473	26.893	27.974	-0.027706					44	28	2	0	0	0	0.4196	1	1295	1295		21.96	0	1	27676	+		20765	16991	14033	14043	23994	23994					0.06281240010866895
KINNGQEVKI	10	Unmodified	_KINNGQEVKI_					0	0	0		ENSG00000134077|ENST00000452837|THUMPD3	ENSG00000134077|ENST00000452837|THUMPD3	ENSG00000134077|ENST00000452837|THUMPD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.832275390625	2	571.830037	1141.64552	0.52232	0.00029868	3.2814	0.0018764	3.8038	0.0021751	571.8317305626368	76.468	0.71038	76.593	76.218	76.929	0.12486					65	24	4	0	0	0	0.16557	1	7147	7147		93.143	7.9824	1	605570			20766	3910	14034	14044	23995	23995					0.08036488426091637
KINPQKLPS	9	Unmodified	_KINPQKLPS_					0	0	0		ENSG00000070718|ENST00000396926|AP3M2	ENSG00000070718|ENST00000396926|AP3M2	ENSG00000070718|ENST00000396926|AP3M2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.8109741210938	2	512.811116	1023.60768	-0.31997	-0.00016408	0.65577	0.00033629	0.3358	0.0001722	512.8110471997029	27.79	1.2113	27.693	27.049	28.261	-0.096947					56	27	3	0	0	0	0.28163	1	1638	1638		66.429	2.222	1	288750			20767	1249	14035	14045	23996	23996					0.09682022231265819
KINQSRVDK	9	Unmodified	_KINQSRVDK_					0	0	0			REV__ENSG00000109684|ENST00000226951|CLNK	REV__ENSG00000109684|ENST00000226951|CLNK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.3131713867188	2	544.314554	1086.61456	-0.61685	-0.00033576	-0.81801	-0.00044526	-1.4349	-0.00078102	544.313993071633	41.604	0.41374	41.608	41.378	41.792	0.0034142					18	9	2	0	0	0	0.78983	1	3086	3086		27.882	1.1893	1	271820	+		20768	17767	14036	14046	23997	23997					0.07471335111836197
KINSPPKQI	9	Unmodified	_KINSPPKQI_					0	0	0			REV__ENSG00000010219|ENST00000543431|DYRK4	REV__ENSG00000010219|ENST00000543431|DYRK4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.8106079101562	2	512.811116	1023.60768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.983	1	27.729	27.229	28.229	-0.25465								0	0	0	0.082209	1	1669	1669		79.713	7.8351	1		+		20769	16158	14037	14047	23998	23998					0.09682022231265819
KIPILVINKVL	11	Unmodified	_KIPILVINKVL_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;nc|ENSG00000105889|Q6NZ63|STEAP1B;ENSG00000105889|ENST00000678116|STEAP1B;ENST00000483679.1_1_7:22532171-22534501:-|nuORF;ENST00000475789.1_1_7:89789075-89791404:+|nuORF;nc|ENSG00000105889|Q6NZ63-2|STEAP1B	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.28839111328125	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.223	1	72.183	71.683	72.683	-0.04039								0	0	0	0.56276	1	7049	7049		13.508	0	1				20770	5983	14038	14048	23999	23999					0.23885722361251283
KIPILVINKVL	11	Unmodified	_KIPILVINKVL_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;nc|ENSG00000105889|Q6NZ63|STEAP1B;ENSG00000105889|ENST00000678116|STEAP1B;ENST00000483679.1_1_7:22532171-22534501:-|nuORF;ENST00000475789.1_1_7:89789075-89791404:+|nuORF;nc|ENSG00000105889|Q6NZ63-2|STEAP1B	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2897644042969	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.268	1	72.228	71.728	72.728	-0.04039								0	0	0	0.56276	1	7055	7055		17.833	7.7292	1				20771	5983	14038	14048	24000	24000					0.23885722361251283
KIPILVINKVL	11	Unmodified	_KIPILVINKVL_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;nc|ENSG00000105889|Q6NZ63|STEAP1B;ENSG00000105889|ENST00000678116|STEAP1B;ENST00000483679.1_1_7:22532171-22534501:-|nuORF;ENST00000475789.1_1_7:89789075-89791404:+|nuORF;nc|ENSG00000105889|Q6NZ63-2|STEAP1B	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.29034423828125	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.436	1	72.395	71.895	72.895	-0.04039								0	0	0	0.56276	1	7075	7075		30.569	16.483	1				20772	5983	14038	14048	24001	24001					0.23885722361251283
KIPILVINKVL	11	Unmodified	_KIPILVINKVL_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;nc|ENSG00000105889|Q6NZ63|STEAP1B;ENSG00000105889|ENST00000678116|STEAP1B;ENST00000483679.1_1_7:22532171-22534501:-|nuORF;ENST00000475789.1_1_7:89789075-89791404:+|nuORF;nc|ENSG00000105889|Q6NZ63-2|STEAP1B	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2888488769531	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.601	1	71.735	71.235	72.235	0.13356								0	0	0	0.56276	1	6523	6523		13.508	3.8618	1				20773	5983	14038	14048	24002	24002					0.23885722361251283
KIPILVINKVL	11	Unmodified	_KIPILVINKVL_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;nc|ENSG00000105889|Q6NZ63|STEAP1B;ENSG00000105889|ENST00000678116|STEAP1B;ENST00000483679.1_1_7:22532171-22534501:-|nuORF;ENST00000475789.1_1_7:89789075-89791404:+|nuORF;nc|ENSG00000105889|Q6NZ63-2|STEAP1B	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2890625	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.718	1	71.85	71.35	72.35	0.13145								0	0	0	0.56276	1	6539	6539		17.833	8.6213	1				20774	5983	14038	14048	24003	24003					0.23885722361251283
KIPILVINKVL	11	Unmodified	_KIPILVINKVL_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;nc|ENSG00000105889|Q6NZ63|STEAP1B;ENSG00000105889|ENST00000678116|STEAP1B;ENST00000483679.1_1_7:22532171-22534501:-|nuORF;ENST00000475789.1_1_7:89789075-89791404:+|nuORF;nc|ENSG00000105889|Q6NZ63-2|STEAP1B	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2897644042969	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.844	1	71.975	71.475	72.475	0.13145								0	0	0	0.56276	1	6554	6554		24.232	13.234	1				20775	5983	14038	14048	24004	24004					0.23885722361251283
KIPILVINKVL	11	Unmodified	_KIPILVINKVL_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;nc|ENSG00000105889|Q6NZ63|STEAP1B;ENSG00000105889|ENST00000678116|STEAP1B;ENST00000483679.1_1_7:22532171-22534501:-|nuORF;ENST00000475789.1_1_7:89789075-89791404:+|nuORF;nc|ENSG00000105889|Q6NZ63-2|STEAP1B	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2904357910156	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.998	1	72.13	71.63	72.63	0.13145								0	0	0	0.56276	1	6572	6572		12.957	3.7457	1				20776	5983	14038	14048	24005	24005					0.23885722361251283
KIPILVINKVL	11	Unmodified	_KIPILVINKVL_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;nc|ENSG00000105889|Q6NZ63|STEAP1B;ENSG00000105889|ENST00000678116|STEAP1B;ENST00000483679.1_1_7:22532171-22534501:-|nuORF;ENST00000475789.1_1_7:89789075-89791404:+|nuORF;nc|ENSG00000105889|Q6NZ63-2|STEAP1B	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2886047363281	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.182	1	72.313	71.813	72.813	0.13145								0	0	0	0.56276	1	6597	6597		17.833	3.7471	1				20777	5983	14038	14048	24006	24006					0.23885722361251283
KIPLRPAKA	9	Unmodified	_KIPLRPAKA_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.330322265625	2	497.332019	992.649485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.66	1	113.66	113.16	114.16	0								0	0	0	0.35896	1	11737	11737		12.207	0	1		+		20778	17017	14039	14049	24007	24007					0.15286622710448228
KIPMKIGLV	9	Unmodified	_KIPMKIGLV_					0	0	0			REV__ENSG00000171714|ENST00000324559|ANO5	REV__ENSG00000171714|ENST00000324559|ANO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	499.8249206542969	2	499.825181	997.635809	-0.25611	-0.00012801	4.2709	0.0021347	4.0148	0.0020067	499.82722061420077	19.808	0.39669	19.738	19.583	19.979	-0.069735					19	12	2	0	0	0	0.7932	1	461	461		23.042	4.7181	1	81978	+		20779	21760	14040	14050	24008	24008					0.13689628886993432
KIPPLGWT	8	Unmodified	_KIPPLGWT_					0	0	0			REV__ENST00000584667.5_1_17:73702633-73702921:+|nuORF	REV__ENST00000584667.5_1_17:73702633-73702921:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26422119140625	2	456.271096	910.527639	1.9444	0.00088719	3.2617	0.0014882	5.2061	0.0023754	456.27388493699124	95.234	0.54324	95.176	94.723	95.266	-0.057526					14	12	2	0	0	0	0.4196	1	10172	10172		26.796	12.132	1	33922	+		20780	29084	14041	14051	24009	24009					0.06879580628083204
KIPRKEALRGG	11	Unmodified	_KIPRKEALRGG_					0	0	0		nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;ENSG00000134668|ENST00000360482|SPOCD1;nc|ENSG00000134668|Q6ZMY3-5|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9333190917969	3	408.922689	1223.74624	0.46215	0.00018898	-3.2467	-0.0013276	-2.7845	-0.0011387	408.921349627744	16.625	0.23394	16.601	16.523	16.757	-0.024035					10	8	2	0	0	0	0.17911	1	161	161		5.6988	0.28586	1	35953			20781	3950	14042	14052	24010	24010					0.14331565199563556
KIPRNTAN	8	Unmodified	_KIPRNTAN_					0	0	0		L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|9|1|sense;L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|169|3|sense	L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|9|1|sense	L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|9|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2632751464844	2	457.264333	912.514114	0.21557	9.8573E-05	-0.19878	-9.0895E-05	0.016791	7.678E-06	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.89043	1	7913	7913		35.618	4.0885	1	1366100			20782	14612	14043	14053	24011	24011					0.054357228488470355
KIPTLIMQHL	10	Unmodified	_KIPTLIMQHL_					0	0	0			REV__nc|ENSG00000020577|Q9UPU9-2|SAMD4A	REV__nc|ENSG00000020577|Q9UPU9-2|SAMD4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.3582153320312	2	597.357376	1192.7002	-0.45682	-0.00027289	1.933	0.0011547	1.4761	0.00088178	597.3582006630761	100.19	3.2446	100.23	98.977	102.22	0.046349					174	76	4	0	0	0	0.86718	1	10780	10780		27.882	2.3082	1	4145900	+		20783	16236	14044	14054	24012	24012					0.11155783973185862
KIPVLGTNS	9	Unmodified	_KIPVLGTNS_					0	0	0		ENSG00000181016|ENST00000312849|LSMEM1	ENSG00000181016|ENST00000312849|LSMEM1	ENSG00000181016|ENST00000312849|LSMEM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.24176025390625	2	464.776742	927.538931	0.31017	0.00014416	0.98612	0.00045832	1.2963	0.00060248	464.7765967886798	20.08	0.50747	19.61	19.397	19.904	-0.46967					15	10	2	0	0	0	0.20789	1	601	601		30.504	0	1	48767			20784	7367	14045	14055	24013	24013					0.07226357931574512
KIPVLGTNS	9	Unmodified	_KIPVLGTNS_					0	0	0		ENSG00000181016|ENST00000312849|LSMEM1	ENSG00000181016|ENST00000312849|LSMEM1	ENSG00000181016|ENST00000312849|LSMEM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	464.776742	927.538931	0.047076	2.188E-05	0.55273	0.0002569	0.59981	0.00027878	464.77588321891227	19.151	0.055958	19.222	19.186	19.242	0.070711	-0.25688	1.6869E-05	NaN	23.042	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9850.5			20785	7367	14045	14055							0.07226357931574512
KIQAFPRE	8	Unmodified	_KIQAFPRE_					0	0	0			REV__nc|ENSG00000111880|O60942-4|RNGTT	REV__nc|ENSG00000111880|O60942-4|RNGTT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.78009033203125	2	494.782359	987.550165	-1.4939	-0.00073914	-2.7072	-0.0013395	-4.2011	-0.0020786	494.78084579093485	83.794	2.8854	83.932	82.379	85.265	0.13811					127	66	3	0	0	0	0.884	1	8178	8178		33.516	1.5607	1	242900	+		20786	17904	14046	14056	24014	24014					0.0558918002569726
KIQCAKTLI	9	Unmodified	_KIQCAKTLI_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;nc|ENSG00000118007|Q8WVM7-2|STAG1;ENSG00000118007|ENST00000383202|STAG1	ENSG00000101972|ENST00000371145|STAG2;ENSG00000118007|ENST00000383202|STAG1	ENSG00000101972|ENST00000371145|STAG2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8035888671875	2	509.309895	1016.60524	-0.034144	-1.739E-05	-2.4912	-0.0012688	-2.5254	-0.0012862	509.3092146283003	83.386	1.9895	83.446	82.207	84.197	0.05925					68	45	2	0	0	0	0.20789	1	8437	8437		21.96	14.27	1	1253400			20787	1975;3007	14047	14057	24015	24015					0.09759850501961864
KIQDLPPVD	9	Unmodified	_KIQDLPPVD_					0	0	0		nc|ENSG00000115919|Q16719-2|KYNU;ENSG00000115919|ENST00000264170|KYNU	nc|ENSG00000115919|Q16719-2|KYNU	nc|ENSG00000115919|Q16719-2|KYNU	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.79052734375	2	512.787307	1023.56006	-0.41518	-0.0002129	0.06055	3.1049E-05	-0.35463	-0.00018185	512.7871529206141	28.203	0.66766	28.106	27.707	28.375	-0.096947					39	15	3	0	0	0	0.71772	1	1673	1673		39.253	0.44669	1	213290			20788	2883	14048	14058	24016	24016					0.049223232404074224
KIQKIQKDV	9	Unmodified	_KIQKIQKDV_					0	0	0		ENST00000570194.6_1_16:30026533-30026572:-|nuORF	ENST00000570194.6_1_16:30026533-30026572:-|nuORF	ENST00000570194.6_1_16:30026533-30026572:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3433837890625	2	550.345323	1098.67609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.52	1	59.614	59.114	60.114	0.094059								0	0	0	0.31437	1	5103	5103		25.574	1.0549	1				20789	13992	14049	14059	24017	24017					0.1307026681113257
KIQKLNVLDRP	11	Unmodified	_KIQKLNVLDRP_					0	0	0			REV__ENST00000479830.2_1_5:68339466-68339598:-|nuORF	REV__ENST00000479830.2_1_5:68339466-68339598:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9415283203125	3	441.94175	1322.80342	-1.4755	-0.00065207	-2.8855	-0.0012752	-4.3609	-0.0019273	441.9403125343586	55.224	1.199	55.287	54.704	55.903	0.063725					106	39	3	0	0	0	0.75457	1	4682	4682		21.032	1.7696	1	485540	+		20790	27405	14050	14060	24018	24018					0.15492987685320259
KIQLGHSK	8	Unmodified	_KIQLGHSK_					0	0	0			REV__ENST00000550351.5_1_12:80180582-80180651:-|nuORF	REV__ENST00000550351.5_1_12:80180582-80180651:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.2692565917969	2	455.777077	909.5396	-1.3449	-0.00061296	3.0174	0.0013753	1.6725	0.00076231	455.7776772636694	28.434	0.78527	28.337	27.84	28.626	-0.096945					24	18	2	0	0	0	0.4196	1	1656	1656		34.173	3.6689	1	25635	+		20791	28598	14051	14061	24019	24019					0.08121197371269773
KIQLVMKVIE	10	Unmodified	_KIQLVMKVIE_					0	0	0		ENSG00000164070|ENST00000296464|HSPA4L	ENSG00000164070|ENST00000296464|HSPA4L	ENSG00000164070|ENST00000296464|HSPA4L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	600.874755859375	2	600.872859	1199.73117	1.0678	0.00064159	2.0468	0.0012299	3.1145	0.0018714	600.8741231094659	15.853	0.27439	15.363	15.255	15.529	-0.48917					7	5	2	0	0	0	0.30286	1	57	57		51.193	0	1	103820			20792	5910	14052	14062	24020	24020					0.1392893728736908
KIQPKTKES	9	Unmodified	_KIQPKTKES_					0	0	0		ENSG00000214029|ENST00000537226|ZNF891	ENSG00000214029|ENST00000537226|ZNF891	ENSG00000214029|ENST00000537226|ZNF891	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.81396484375	2	529.813856	1057.61316	0.82368	0.0004364	-0.87873	-0.00046556	-0.055051	-2.9167E-05	529.8132607725706	28.221	0.81391	28.198	27.978	28.792	-0.023558					38	18	3	0	0	0	0.7932	1	1329	1329		23.523	2.5758	1	203400			20793	8612	14053	14063	24021	24021					0.0866570102307378
KIQPPRVAL	9	Unmodified	_KIQPPRVAL_					0	0	0			REV__ENSG00000167670|ENST00000301280|CHAF1A	REV__ENSG00000167670|ENST00000301280|CHAF1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.3271484375	2	511.329476	1020.6444	-1.5781	-0.00080692	-3.0137	-0.001541	-4.5918	-0.0023479	511.3278411382384	97.118	1.95	97.32	96.964	98.914	0.20206					112	44	4	0	0	0	0.78058	1	9988	9988		30.504	5.0535	1	1123400	+		20794	21413	14054	14064	24022	24022					0.13490318847846083
KIQQDLSKQKP	11	Unmodified	_KIQQDLSKQKP_					0	0	0			REV__nc|ENSG00000166928|Q96JA4-5|MS4A14	REV__nc|ENSG00000166928|Q96JA4-5|MS4A14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2577209472656	3	438.257626	1311.75105	-2.0264	-0.0008881	2.1632	0.00094804	0.13677	5.994E-05	438.2585447663128	30.099	0.96018	30.099	29.739	30.699	0					100	33	5	0	0	0	0.70278	1	1354	1354		31.068	1.5174	1	863580	+		20795	30007	14055	14065	24023	24023					0.10764404551673579
KIQQDLSKQKP	11	Unmodified	_KIQQDLSKQKP_					0	0	0			REV__nc|ENSG00000166928|Q96JA4-5|MS4A14	REV__nc|ENSG00000166928|Q96JA4-5|MS4A14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2576599121094	3	438.257626	1311.75105	0.25686	0.00011257	0.17718	7.7652E-05	0.43405	0.00019022	438.25763532850164	29.855	0.59691	29.866	29.546	30.143	0.01123					91	29	5	0	0	0	0.68764	1	1282	1282		33.542	4.9648	1	489580	+		20796	30007	14055	14065	24024	24024					0.10764404551673579
KIQSIPLPPTT	11	Unmodified	_KIQSIPLPPTT_					0	0	0		nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1;ENSG00000179981|ENST00000580243|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8566284179688	2	597.858264	1193.70197	-0.32365	-0.0001935	-2.0329	-0.0012154	-2.3566	-0.0014089	598.3588954923197	94.611	4.9065	94.611	93.622	98.528	0					293	115	3	0	0	0	0.72106	1	9543	9543		28.081	3.5623	1	5706300			20797	7311	14056	14066	24025	24025					0.11287116262747077
KIQSIPLPPTT	11	Unmodified	_KIQSIPLPPTT_					0	0	0		nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1;ENSG00000179981|ENST00000580243|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8561401367188	2	597.858264	1193.70197	-0.56225	-0.00033615	-2.7782	-0.001661	-3.3405	-0.0019971	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.70737	1	9552	9552		30.318	1.1477	1	2042000			20798	7311	14056	14066	24026	24026					0.11287116262747077
KIQSIPLPPTT	11	Unmodified	_KIQSIPLPPTT_					0	0	0		nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1;ENSG00000179981|ENST00000580243|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.85595703125	2	597.858264	1193.70197	-0.56163	-0.00033577	-2.7129	-0.0016219	-3.2745	-0.0019577	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.7342	1	9750	9750		25.574	2.0514	1	6282800			20799	7311	14056	14066	24027	24027					0.11287116262747077
KIQSIPLPPTT	11	Unmodified	_KIQSIPLPPTT_					0	0	0		nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1;ENSG00000179981|ENST00000580243|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8563232421875	2	597.858264	1193.70197	-0.43133	-0.00025788	-2.8188	-0.0016852	-3.2501	-0.0019431	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.61369	1	10093	10093		42.864	3.6114	1	6857100			20800	7311	14056	14066	24028	24028					0.11287116262747077
KIQSIPLPPTT	11	Unmodified	_KIQSIPLPPTT_					0	0	0		nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1;ENSG00000179981|ENST00000580243|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8560180664062	2	597.858264	1193.70197	0.8216	0.0004912	-4.2474	-0.0025393	-3.4258	-0.0020481	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.65746	1	9350	9350		37.812	1.3648	1	2486400			20801	7311	14056	14066	24029	24029					0.11287116262747077
KIQSIPLPPTT	11	Unmodified	_KIQSIPLPPTT_					0	0	0		nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1;ENSG00000179981|ENST00000580243|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8556518554688	2	597.858264	1193.70197	-1.2963	-0.00077498	-2.0956	-0.0012529	-3.3918	-0.0020278	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.69248	1	9209	9209		32.751	5.7032	1	2401200			20802	7311	14056	14066	24030	24030					0.11287116262747077
KIQSIPLPPTT	11	Unmodified	_KIQSIPLPPTT_					0	0	0		nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1;ENSG00000179981|ENST00000580243|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8560791015625	2	597.858264	1193.70197	-1.2962	-0.00077492	-1.6524	-0.0009879	-2.9486	-0.0017628	598.3589924641743	94.317	5.5544	94.515	93.356	98.911	0.19827					368	130	4	0	0	0	0.58425	3	9532	9532;9676;9748		45.972	7.2541	1	9481100			20803	7311	14056	14066	24031;24032;24033	24031					0.11287116262747077
KIQSRGSKRLL	11	Unmodified	_KIQSRGSKRLL_					0	0	0		ENST00000449714.1_1_2:150443929-150443968:+|nuORF	ENST00000449714.1_1_2:150443929-150443968:+|nuORF	ENST00000449714.1_1_2:150443929-150443968:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4058837890625	2	643.406778	1284.799	2.6791	0.0017238	-2.3143	-0.001489	0.36483	0.00023474	643.4052640495355	107.03	1.0145	106.99	106.79	107.81	-0.034134					59	23	3	0	0	0	0.638	1	11898	11898		40.058	4.4399	1	2103900			20804	11878	14057	14067	24034	24034					0.16799523262420735
KIQTIILKDIT	11	Unmodified	_KIQTIILKDIT_					0	0	0		ENST00000352159.8_1_10:90773121-90774204:+|nuORF;nc|ENSG00000026103|P25445-6|FAS;ENSG00000026103|ENST00000652046|FAS	ENST00000352159.8_1_10:90773121-90774204:+|nuORF	ENST00000352159.8_1_10:90773121-90774204:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4030151367188	2	643.408121	1284.80169	0.024155	1.5542E-05	-3.2881	-0.0021156	-3.264	-0.0021001	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.62614	1	11141	11141		41.427	4.9799	1	11188000			20805	870	14058	14068	24035	24035					0.17067933876705865
KIQTIILKDIT	11	Unmodified	_KIQTIILKDIT_					0	0	0		ENST00000352159.8_1_10:90773121-90774204:+|nuORF;nc|ENSG00000026103|P25445-6|FAS;ENSG00000026103|ENST00000652046|FAS	ENST00000352159.8_1_10:90773121-90774204:+|nuORF	ENST00000352159.8_1_10:90773121-90774204:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4035034179688	2	643.408121	1284.80169	-0.027625	-1.7774E-05	-1.7739	-0.0011413	-1.8015	-0.0011591	643.4069538956494	107.53	1.1842	107.49	106.64	107.82	-0.034401					87	27	4	0	0	0	0.66929	2	11748	11635;11748		36.447	3.596	1	2502500			20806	870	14058	14068	24036;24037	24037					0.17067933876705865
KIQYKRLLFRV	11	Unmodified	_KIQYKRLLFRV_					0	0	0			REV__ENSG00000156009|ENST00000286482|MAGEA8	REV__ENSG00000156009|ENST00000286482|MAGEA8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.3124084472656	3	488.645156	1462.91364	-0.81401	-0.00039776	3.4407	0.0016813	2.6267	0.0012835	488.64693425944563	16.782	0.52176	16.827	16.526	17.048	0.0457					36	22	2	0	0	0	0.18159	1	172	172		17.167	3.0807	1	155450	+		20807	20461	14059	14069	24038	24038					0.2006983274434333
KIRCLKPV	8	Unmodified	_KIRCLKPV_					0	0	0			REV__nc|ENSG00000164488|Q5SW24-3|DACT2	REV__nc|ENSG00000164488|Q5SW24-3|DACT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3072509765625	2	478.807322	955.600092	0.23734	0.00011364	-3.1763	-0.0015209	-2.939	-0.0014072	478.8052722512074	40.349	0.98389	40.43	39.962	40.946	0.081345					59	33	3	0	0	0	0.86288	1	2485	2485		26.796	1.3459	1	253080	+		20808	21086	14060	14070	24039	24039					0.12051591429997188
KIRCLLKKKYR	11	Unmodified	_KIRCLLKKKYR_					0	0	0		ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.9806823730469	3	483.646391	1447.91734	0.1589	7.6851E-05	-0.21524	-0.0001041	-0.056344	-2.7251E-05	483.6461692650574	46.582	1.726	46.568	46.059	47.785	-0.013821					190	48	5	0	0	0	0.81219	1	3732	3732		8.7993	2.1397	1	4073800			20809	10545	14061	14071	24040	24040					0.2113017924655196
KIRCLLKKKYR	11	Unmodified	_KIRCLLKKKYR_					0	0	0		ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.64605712890625	3	483.646391	1447.91734	-0.78234	-0.00037837	0.69031	0.00033387	-0.092021	-4.4505E-05	483.64658979005526	46.598	1.6296	46.569	46.013	47.642	-0.028782					170	44	5	0	0	0	0.76892	1	3803	3803		17.833	3.7471	1	5108400			20810	10545	14061	14071	24041	24041					0.2113017924655196
KIRCLLKKKYR	11	Unmodified	_KIRCLLKKKYR_					0	0	0		ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.64581298828125	3	483.646391	1447.91734	-0.37847	-0.00018305	-0.53168	-0.00025715	-0.91015	-0.00044019	483.6460621723924	44.406	1.6273	44.856	44.239	45.867	0.45025					169	39	6	0	0	0	0.79224	1	4057	4057		12.957	3.3113	1	32621000			20811	10545	14061	14071	24042	24042					0.2113017924655196
KIRDFHRK	8	Unmodified	_KIRDFHRK_					0	0	0		ENSG00000204610|ENST00000376694|TRIM15	ENSG00000204610|ENST00000376694|TRIM15	ENSG00000204610|ENST00000376694|TRIM15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.3275146484375	2	550.327799	1098.64105	3.1879	0.0017544	-4.2392	-0.0023329	-1.0513	-0.00057854	550.325464553472	100.2	1.1012	100.15	99.651	100.75	-0.052353					65	24	3	0	0	0	0.84341	1	10908	10908		24.203	1.1603	1	374270			20812	8465	14062	14072	24043	24043					0.09567068793830913
KIRELETR	8	Unmodified	_KIRELETR_					0	0	0		nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-5|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A;ENST00000531892.5_1_17:27413633-27417836:-|nuORF;ENST00000546105.5_1_17:27401790-27418677:-|nuORF	nc|ENSG00000196535|Q92614-3|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.8133544921875	2	522.811648	1043.60874	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.722	1	39.244	38.744	39.744	0.52235								0	0	0	0.10328	1	3219	3219		71.877	8.5712	1				20813	8070	14063	14073	24044	24044					0.08868236600164892
KIRHFVSL	8	Unmodified	_KIRHFVSL_					0	0	0		nc|ENSG00000284762|O95263-3|PDE8B;nc|ENSG00000284762|O95263-6|PDE8B;nc|ENSG00000284762|O95263-4|PDE8B;ENSG00000113231|ENST00000264917|PDE8B	nc|ENSG00000284762|O95263-3|PDE8B	nc|ENSG00000284762|O95263-3|PDE8B	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.3056640625	2	500.308544	998.602535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.103	1	95.103	94.603	95.603	0								0	0	0	0.30457	1	9448	9448		50.025	0.58299	1				20814	2705	14064	14074	24045	24045					0.10317763159321203
KIRHLMLHKLK	11	Unmodified	_KIRHLMLHKLK_					0	0	0			REV__ENST00000519029.1_1_8:67896384-67896720:-|nuORF	REV__ENST00000519029.1_1_8:67896384-67896720:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.970703125	3	472.970986	1415.89113	-0.99151	-0.00046896	1.0406	0.00049218	0.0491	2.3223E-05	472.9714128496593	48.869	1.9906	48.895	48.114	50.105	0.025574					169	50	5	0	0	0	0.76892	1	3773	3773		17.833	0.6664	1	1653800	+		20815	28070	14065	14075	24046	24046					0.19981910075080123
KIRHLMLHKLK	11	Unmodified	_KIRHLMLHKLK_					0	0	0			REV__ENST00000519029.1_1_8:67896384-67896720:-|nuORF	REV__ENST00000519029.1_1_8:67896384-67896720:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.97076416015625	3	472.970986	1415.89113	0.3106	0.00014691	-0.31693	-0.0001499	-0.006331	-2.9944E-06	473.3050663884793	49.019	2.0636	49.057	48.411	50.474	0.037731					160	51	5	0	0	0	0.77511	1	3844	3844		16.53	0.6092	1	2073100	+		20816	28070	14065	14075	24047	24047					0.19981910075080123
KIRHLMLHKLK	11	Unmodified	_KIRHLMLHKLK_					0	0	0			REV__ENST00000519029.1_1_8:67896384-67896720:-|nuORF	REV__ENST00000519029.1_1_8:67896384-67896720:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.9710388183594	3	472.970986	1415.89113	-0.32273	-0.00015264	0.35699	0.00016885	0.034258	1.6203E-05	472.97110855573317	48.963	2.2671	48.87	48.252	50.519	-0.093182					180	57	5	0	0	0	0.81021	1	3848	3848		9.2118	0	1	1641600	+		20817	28070	14065	14075	24048	24048					0.19981910075080123
KIRHLMLHKLK	11	Unmodified	_KIRHLMLHKLK_					0	0	0			REV__ENST00000519029.1_1_8:67896384-67896720:-|nuORF	REV__ENST00000519029.1_1_8:67896384-67896720:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.9712829589844	3	472.970986	1415.89113	-0.61443	-0.00029061	0.52789	0.00024968	-0.086546	-4.0934E-05	472.9711500191985	46.191	1.1241	46.663	46.09	47.214	0.4714					97	27	5	0	0	0	0.77205	1	4363	4363		17.167	4.2093	1	6530400	+		20818	28070	14065	14075	24049	24049					0.19981910075080123
KIRILQGPHAN	11	Unmodified	_KIRILQGPHAN_					0	0	0		nc|ENSG00000147231|Q6NSI4-4|RADX;ENSG00000147231|ENST00000372548|RADX;nc|ENSG00000147231|Q6NSI4-3|RADX	nc|ENSG00000147231|Q6NSI4-4|RADX	nc|ENSG00000147231|Q6NSI4-4|RADX	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.8720092773438	2	623.872571	1245.73059	-0.065768	-4.1031E-05	-3.3413	-0.0020845	-3.407	-0.0021255	623.8703810158217	104.89	2.4155	104.89	104.43	106.84	0					131	56	4	0	0	0	0.7342	1	10769	10769		25.574	2.5316	1	1348200			20819	4889	14066	14076	24050	24050					0.11755278682585413
KIRILQGPHAN	11	Unmodified	_KIRILQGPHAN_					0	0	0		nc|ENSG00000147231|Q6NSI4-4|RADX;ENSG00000147231|ENST00000372548|RADX;nc|ENSG00000147231|Q6NSI4-3|RADX	nc|ENSG00000147231|Q6NSI4-4|RADX	nc|ENSG00000147231|Q6NSI4-4|RADX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	623.8715209960938	2	623.872571	1245.73059	0.81494	0.00050842	-4.2483	-0.0026504	-3.4334	-0.002142	623.869854859963	104.57	2.157	104.61	104.13	106.28	0.039856					135	51	4	0	0	0	0.7342	1	11427	11427		25.574	2.0514	1	1612700			20820	4889	14066	14076	24051	24051					0.11755278682585413
KIRISITKREK	11	Unmodified	_KIRISITKREK_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.78240966796875	3	457.964666	1370.87217	-1.2659	-0.00057975	-2.5139	-0.0011513	-3.7799	-0.001731	457.96481839955595	21.425	0.090611	21.47	21.403	21.494	0.045401					5	3	2	0	0	0	0.17244	1	577	577		31.068	13.235	1	14864			20821	5333	14067	14077	24052	24052					0.20156651985007557
KIRKFFLSKT	10	Unmodified	_KIRKFFLSKT_					0	0	0			REV__L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|126|3|sense	REV__L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|126|3|sense	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8721313476562	2	634.39789	1266.78123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.63	1	111.66	111.16	112.16	0.030388								0	0	0	0.45132	1	12225	12225		13.454	3.7484	1		+		20822	29556	14068	14078	24053	24053					0.1585080800753076
KIRKSAIMFPI	11	Unmodified	_KIRKSAIMFPI_					0	0	0			REV__L1M3_dup5191|chr13:100538615-100539826:-|1.143422986957237|0.4271131615856792|1.42|63.0|31|3|sense	REV__L1M3_dup5191|chr13:100538615-100539826:-|1.143422986957237|0.4271131615856792|1.42|63.0|31|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.8848571777344	3	435.268809	1302.7846	-0.8232	-0.00035831	0.48335	0.00021039	-0.33985	-0.00014793	435.2683725532063	28.124	0.16488	28.027	27.974	28.139	-0.096947					5	3	2	0	0	0	0.1745	1	1689	1689		12.957	4.9231	1	31180	+		20823	29457	14069	14079	24054	24054					0.14531734789920847
KIRLKPKVLLN	11	Unmodified	_KIRLKPKVLLN_					0	0	0		ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.787841796875	3	441.306252	1320.89693	-0.092964	-4.1026E-05	-2.5099	-0.0011076	-2.6029	-0.0011487	441.3051131911291	39.932	0.82263	39.884	39.423	40.245	-0.04789					39	21	2	0	0	0	0.1745	1	2521	2521		12.957	0	1	145980			20824	6015	14070	14080	24055	24055					0.2493133185841998
KIRLKPLGSAQ	11	Unmodified	_KIRLKPLGSAQ_					0	0	0			REV__ENSG00000140534|ENST00000268138|TICRR	REV__ENSG00000140534|ENST00000268138|TICRR	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.2606506347656	3	404.25919	1209.75574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.441	1	22.489	21.989	22.989	0.048553								0	0	0	0.56276	1	667	667		18.531	1.8137	1		+		20825	19628	14071	14081	24056	24056					0.15925333485120063
KIRNKGLDLLR	11	Unmodified	_KIRNKGLDLLR_					0	0	0			REV__nc|ENSG00000169783|Q96FE5-2|LINGO1	REV__nc|ENSG00000169783|Q96FE5-2|LINGO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.6175842285156	3	442.617377	1324.8303	0.043873	1.9419E-05	0.14131	6.2548E-05	0.18519	8.1967E-05	442.61725664228896	16.423	0.3677	15.936	15.821	16.189	-0.48718					17	7	4	0	0	0	0.74022	1	134	134		24.232	4.9691	1	169690	+		20826	21603	14072	14082	24057	24057					0.1808809629649204
KIRNSGSA	8	Unmodified	_KIRNSGSA_					0	0	0		ENSG00000178031|ENST00000380548|ADAMTSL1;nc|ENSG00000178031|Q8N6G6-2|ADAMTSL1;nc|ENSG00000178031|Q8N6G6-1|ADAMTSL1;nc|ENSG00000178031|Q8N6G6-4|ADAMTSL1	ENSG00000178031|ENST00000380548|ADAMTSL1	ENSG00000178031|ENST00000380548|ADAMTSL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.22906494140625	2	416.735409	831.456264	-0.9828	-0.00040957	4.3394	0.0018084	3.3566	0.0013988	416.73707595150375	42.366	1.3395	42.8	42.37	43.71	0.4334					57	32	2	0	0	0	0.4196	1	3749	3749		16.473	1.6083	1	520070			20827	7177	14073	14083	24058	24058					0.0337946092341781
KIRRRIKWNRH	11	Unmodified	_KIRRRIKWNRH_					0	0	0			REV__chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	REV__chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	521.6571044921875	3	521.658681	1561.95422	0.0018454	9.6266E-07	-2.8837	-0.0015043	-2.8818	-0.0015033	521.6570438345822	55.201	1.4309	55.194	54.756	56.187	-0.0077057					142	39	5	0	0	0	0.7896	2	4906	4875;4906		13.508	7.1871	1	1446100	+		20828	15616	14074	14084	24059;24060	24060					0.19571611907349507
KIRRRIKWNRH	11	Unmodified	_KIRRRIKWNRH_					0	0	0			REV__chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	REV__chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	521.6578979492188	3	521.658681	1561.95422	0.011985	6.2519E-06	-3.3346	-0.0017395	-3.3226	-0.0017333	521.6568251732957	55.332	1.3019	55.36	54.888	56.19	0.027672					121	33	5	0	0	0	0.8498	1	5054	5054		6.001	0.30226	1	1506400	+		20829	15616	14074	14084	24061	24061					0.19571611907349507
KIRRRIKWNRH	11	Unmodified	_KIRRRIKWNRH_					0	0	0			REV__chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	REV__chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	521.6563720703125	3	521.658681	1561.95422	0.41338	0.00021564	-3.4663	-0.0018082	-3.0529	-0.0015926	521.9911888530377	55.139	1.4097	55.23	54.807	56.216	0.091167					167	45	5	0	0	0	0.81021	2	4562	4562;4570		9.2118	5.5927	1	1954200	+		20830	15616	14074	14084	24062;24063	24062					0.19571611907349507
KIRRRIKWNRH	11	Unmodified	_KIRRRIKWNRH_					0	0	0			REV__chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	REV__chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	521.991455078125	3	521.658681	1561.95422	-0.37881	-0.00019761	-2.5976	-0.0013551	-2.9764	-0.0015527	521.6571917476966	55.116	1.5547	55.068	54.591	56.146	-0.04821					175	52	5	0	0	0	0.81021	2	4582	4582;4671		9.2118	2.8909	1	1771100	+		20831	15616	14074	14084	24064;24065	24064					0.19571611907349507
KIRRRIKWNRH	11	Unmodified	_KIRRRIKWNRH_					0	0	0			REV__chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	REV__chr15:59123627-59166657|25|10.76|0.0|13.14|+|2|CCNB2,None|3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.6575317382812	3	521.658681	1561.95422	0.10296	5.3708E-05	-3.274	-0.0017079	-3.171	-0.0016542	521.6568980365676	52.326	1.6503	52.993	52.596	54.247	0.66729					114	39	4	0	0	0	0.81219	1	5322	5322		8.7993	3.1005	1	2604100	+		20832	15616	14074	14084	24066	24066					0.19571611907349507
KIRSKLTSI	9	Unmodified	_KIRSKLTSI_					0	0	0			REV__ENSG00000127989|ENST00000351870|MTERF1	REV__ENSG00000127989|ENST00000351870|MTERF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3036499023438	2	523.340041	1044.66553	1.6229	0.00084933	2.4165	0.0012647	4.0394	0.002114	523.34157838359	88.469	0.68893	88.395	87.942	88.631	-0.074005					20	16	2	0	0	0	0.20789	1	9232	9232		26.693	6.6961	1	78980	+		20833	18756	14075	14085	24067	24067					0.14498284156707086
KIRSLHTDALK	11	Unmodified	_KIRSLHTDALK_					0	0	0		ENSG00000173517|ENST00000682557|PEAK1	ENSG00000173517|ENST00000682557|PEAK1	ENSG00000173517|ENST00000682557|PEAK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.3846435546875	2	641.385511	1280.75647	-0.056243	-3.6073E-05	-1.4846	-0.00095223	-1.5409	-0.00098831	641.38426478806	102.85	1.2882	102.86	102.47	103.76	0.0082016					78	31	4	0	0	0	0.68532	1	11041	11041		33.922	6.8743	1	1910600			20834	6863	14076	14086	24068	24068					0.12732128134166487
KIRSLHTDALK	11	Unmodified	_KIRSLHTDALK_					0	0	0		ENSG00000173517|ENST00000682557|PEAK1	ENSG00000173517|ENST00000682557|PEAK1	ENSG00000173517|ENST00000682557|PEAK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.385009765625	2	641.385511	1280.75647	1.6527	0.00106	-3.143	-0.0020159	-1.4904	-0.00095591	641.383219573957	102.66	1.2178	102.7	102.3	103.51	0.043198					82	29	4	0	0	0	0.74763	1	11103	11103		22.58	2.5492	1	1834000			20835	6863	14076	14086	24069	24069					0.12732128134166487
KIRSLTEYMQ	10	Unmodified	_KIRSLTEYMQ_					0	0	0		ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8932495117188	2	634.837005	1267.65946	1.4963	0.00094989	3.5767	0.0022706	5.073	0.0032205	634.8408736019004	106.17	0.12601	106.32	106.26	106.39	0.14843					4	2	2	0	0	0	0.37624	1	11358	11358		44.377	0	1	42362			20836	5356	14077	14087	24070	24070					0.03633397862859056
KIRTLFEPT	9	Unmodified	_KIRTLFEPT_					0	0	0			REV__ENSG00000073756|ENST00000367468|PTGS2	REV__ENSG00000073756|ENST00000367468|PTGS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.3070678710938	2	552.824224	1103.63389	0.83575	0.00046202	-1.902	-0.0010515	-1.0663	-0.00058947	552.8230983854451	92.503	1.1771	92.95	92.349	93.526	0.44661					47	27	2	0	0	0	0.20789	1	10946	10946		23.042	0	1	250300	+		20837	16681	14078	14088	24071	24071					0.08622291402753035
KIRVEKAKPP	10	Unmodified	_KIRVEKAKPP_					0	0	0			REV__nc|ENSG00000172955|P28332|ADH6	REV__nc|ENSG00000172955|P28332|ADH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.3787841796875	2	583.374415	1164.73428	-1.7422	-0.0010164	4.0544	0.0023653	2.3122	0.0013489	583.3766458505703	43.605	2.2277	44.055	43.187	45.415	0.45024					135	54	4	0	0	0	0.74274	1	3932	3932		42.396	3.1433	1	6139000	+		20838	21871	14079	14089	24072	24072					0.1584994845638903
KIRVVVVTY	9	Unmodified	_KIRVVVVTY_					0	0	0		ENST00000395067.6_1_9:103213293-103213446:+|nuORF	ENST00000395067.6_1_9:103213293-103213446:+|nuORF	ENST00000395067.6_1_9:103213293-103213446:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3267822265625	2	538.844959	1075.67537	-0.5366	-0.00028914	1.3558	0.00073059	0.81925	0.00044145	538.8450770939596	101.55	0.2377	101.55	101.45	101.69	0					7	5	2	0	0	0	0.20789	1	10341	10341		23.042	0	1	74964			20839	11087	14080	14090	24073	24073					0.14055472162090155
KISEVVELLKK	11	Unmodified	_KISEVVELLKK_					0	0	0		nc|ENSG00000116062|P52701-4|MSH6;nc|ENSG00000116062|P52701-3|MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6	nc|ENSG00000116062|P52701-4|MSH6	nc|ENSG00000116062|P52701-4|MSH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.405029296875	2	643.408121	1284.80169	-0.02708	-1.7423E-05	-3.4253	-0.0022039	-3.4524	-0.0022213	643.4057840301668	105.94	1.5968	105.91	105.23	106.82	-0.025146					165	37	6	0	0	0	0.67778	1	11550	11550		35.152	2.3396	1	14580000			20840	2896	14081	14091	24074	24074					0.17067933876683128
KISIASAKKTT	11	Unmodified	_KISIASAKKTT_					0	0	0			REV__nc|ENSG00000081154|Q8WW12-2|PCNP	REV__nc|ENSG00000081154|Q8WW12-2|PCNP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3557739257812	2	574.355888	1146.69722	2.697	0.001549	-2.6609	-0.0015283	0.036094	2.0731E-05	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.70737	1	10776	10776		30.318	1.1682	1	738540	+		20841	16819	14082	14092	24075	24075					0.12974232119995577
KISKRLHLSK	10	Unmodified	_KISKRLHLSK_					0	0	0		ENSG00000065308|ENST00000182527|TRAM2	ENSG00000065308|ENST00000182527|TRAM2	ENSG00000065308|ENST00000182527|TRAM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	605.3906860351562	2	605.393139	1208.77173	-1.0119	-0.00061261	-4.4795	-0.0027118	-5.4914	-0.0033244	605.3903055636187	44.786	1.0425	44.786	44.46	45.502	0					57	25	3	0	0	0	0.86763	1	3268	3268		26.693	2.1737	1	158280			20842	1124	14083	14093	24076	24076					0.17569039722025082
KISNNVQTP	9	Unmodified	_KISNNVQTP_					0	0	0			REV__chr12:102182627-102195951|62|17.92|0.95|4.24|+|ENST00000417507|PARPBP,PARPBP	REV__chr12:102182627-102195951|62|17.92|0.95|4.24|+|ENST00000417507|PARPBP,PARPBP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.7747497558594	2	500.774731	999.534909	-1.48	-0.00074115	0.77459	0.0003879	-0.70542	-0.00035326	500.77520179835545	50.501	0.59034	50.501	50.257	50.848	0					34	14	3	0	0	0	0.41566	1	4047	4047		56.721	6.6965	1	183120	+		20843	15511	14084	14094	24077	24077					0.03512268437839339
KISNVHSR	8	Unmodified	_KISNVHSR_					0	0	0			REV__nc|ENSG00000144395|Q8NCX0-2|CCDC150	REV__nc|ENSG00000144395|Q8NCX0-2|CCDC150	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7554931640625	2	470.769783	939.525013	-1.6251	-0.00076504	-0.21436	-0.00010091	-1.8394	-0.00086596	470.76962299009335	46.971	0.63581	47.894	47.563	48.199	0.92315					23	14	2	0	0	0	0.4196	1	4490	4490		23.042	0	1	3617800	+		20844	29906	14085	14095	24078	24078					0.052831252231385406
KISRKVYPNL	10	Unmodified	_KISRKVYPNL_					0	0	0			REV__ENST00000495005.5_1_21:35281377-35288052:-|nuORF	REV__ENST00000495005.5_1_21:35281377-35288052:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7853698730469	3	406.583674	1216.72919	0.46306	0.00018827	-1.001	-0.00040698	-0.53792	-0.00021871	406.5835792029644	31.995	0.68588	32.102	31.802	32.488	0.10707					39	15	3	0	0	0	0.37624	1	2197	2197		27.047	10.517	1	434060	+		20845	23824	14086	14096	24079	24079					0.12949644593800258
KISSEQFDKTK	11	Unmodified	_KISSEQFDKTK_					0	0	0			REV__ENSG00000087206|ENST00000511320|UIMC1	REV__ENSG00000087206|ENST00000511320|UIMC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2451477050781	3	437.56987	1309.68778	-0.1105	-4.835E-05	0.79813	0.00034924	0.68764	0.00030089	437.5698703487814	34.695	0.63161	34.691	34.376	35.008	-0.0047417					34	16	3	0	0	0	0.17289	1	2131	2131		11.932	0	1	62620	+		20846	16926	14087	14097	24080	24080					0.045324190437895595
KISTANFKYIT	11	Unmodified	_KISTANFKYIT_					0	0	0			REV__L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|58|2|sense	REV__L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|58|2|sense	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.373291015625	2	643.36117	1284.70779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.58	1	115.55	115.05	116.05	-0.02433								0	0	0	0.56276	1	12799	12799		27.047	4.4677	1		+		20847	29624	14088	14098	24081	24081					0.07682214774422391
KISTVKAST	9	Unmodified	_KISTVKAST_					0	0	0		ENSG00000047849|ENST00000683076|MAP4	ENSG00000047849|ENST00000683076|MAP4	ENSG00000047849|ENST00000683076|MAP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7824401855469	2	467.782025	933.549496	-1.2971	-0.00060674	2.7965	0.0013082	1.4995	0.00070143	467.78318178495175	30.176	0.88393	30.205	29.876	30.76	0.028618					38	19	3	0	0	0	0.68711	1	1947	1947		41.427	7.2541	1	607830			20848	969	14089	14099	24082	24082					0.08006340585984617
KISVKFIR	8	Unmodified	_KISVKFIR_					0	0	0			REV__nc|ENSG00000123908|Q9UKV8-2|AGO2	REV__nc|ENSG00000123908|Q9UKV8-2|AGO2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.8271484375	2	495.826569	989.638586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.816	1	17.194	16.694	17.694	-0.62141								0	0	0	0.29978	1	311	311		21.96	4.5949	1		+		20849	18550	14090	14100	24083	24083					0.14335220336181465
KITATTTQ	8	Unmodified	_KITATTTQ_					0	0	0		nc|ENSG00000116690|Q92954-5|PRG4;nc|ENSG00000116690|Q92954-4|PRG4;nc|ENSG00000116690|Q92954-3|PRG4;nc|ENSG00000116690|Q92954-6|PRG4;nc|ENSG00000116690|Q92954-2|PRG4;ENSG00000116690|ENST00000445192|PRG4	nc|ENSG00000116690|Q92954-5|PRG4	nc|ENSG00000116690|Q92954-5|PRG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.2456970214844	2	432.245275	862.475997	2.4229	0.0010473	1.5062	0.00065104	3.9291	0.0016983	432.2459630773034	97.921	1.1428	97.969	97.579	98.722	0.048157					63	25	4	0	0	0	0.87792	1	10452	10452		31.53	1.6883	1	431540			20850	2934	14091	14101	24084	24084					0.03925792143513718
KITELPTIP	9	Unmodified	_KITELPTIP_					0	0	0			REV__nc|ENSG00000179388|Q06889-2|EGR3	REV__nc|ENSG00000179388|Q06889-2|EGR3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3092346191406	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.292	1	55.264	54.764	55.764	-0.027279								0	0	0	0.30613	1	5027	5027		42.396	1.618	1		+		20851	22334	14092	14102	24085	24085					0.0963208427989457
KITFRTPLY	9	Unmodified	_KITFRTPLY_					0	0	0		nc|ENSG00000164318|Q63HQ2|EGFLAM;ENSG00000164318|ENST00000322350|EGFLAM;nc|ENSG00000164318|Q63HQ2-4|EGFLAM	nc|ENSG00000164318|Q63HQ2|EGFLAM	nc|ENSG00000164318|Q63HQ2|EGFLAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.835693359375	2	569.834591	1137.65463	1.1831	0.00067415	-1.2966	-0.00073884	-0.11352	-6.4686E-05	569.8337831453182	57.466	1.5319	58.021	57.642	59.174	0.55513					116	37	5	0	0	0	0.17181	1	5960	5960		79.713	1.4488	1	15184000			20852	5954	14093	14103	24086	24086					0.09130881782425604
KITHTREK	8	Unmodified	_KITHTREK_					0	0	0		ENSG00000256229|ENST00000335117|ZNF486	ENSG00000256229|ENST00000335117|ZNF486	ENSG00000256229|ENST00000335117|ZNF486	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8002624511719	2	506.79854	1011.58253	0.050513	2.56E-05	3.6001	0.0018245	3.6506	0.0018501	506.80028093327485	25.966	0.97153	25.709	25.424	26.395	-0.25721					59	21	4	0	0	0	0.81485	1	1369	1369		62.107	12.666	1	1527700			20853	8895	14094	14104	24087	24087					0.07719967428704422
KITIPITP	8	Unmodified	_KITIPITP_					0	0	0		ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78759765625	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.81548	1	3339	3339		20.482	1.1219	1	4170800			20854	8529	14095	14105	24088	24088					0.11308733942325944
KITKVTTQQ	9	Unmodified	_KITKVTTQQ_					0	0	0		nc|ENSG00000169876|Q685J3-2|MUC17;ENSG00000169876|ENST00000306151|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.81396484375	2	523.813856	1045.61316	2.1623	0.0011327	-1.993	-0.0010439	0.16937	8.872E-05	523.8126069977261	24.772	0.57644	24.258	23.968	24.544	-0.51365					33	12	4	0	0	0	0.44421	1	1223	1223		54.776	3.4409	1	276450			20855	6534	14096	14106	24089	24089					0.0921770102308983
KITQTLFHISF	11	Unmodified	_KITQTLFHISF_					0	0	0		ENST00000457388.1_1_10:37627086-37627398:+|nuORF	ENST00000457388.1_1_10:37627086-37627398:+|nuORF	ENST00000457388.1_1_10:37627086-37627398:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2562255859375	3	445.587084	1333.73942	0.64918	0.00028926	-3.7104	-0.0016533	-3.0612	-0.001364	445.5855645395751	37.426	0.44811	37.912	37.577	38.025	0.48581					15	10	2	0	0	0	0.17396	1	3022	3022		25.892	0	1	72063			20856	11980	14097	14107	24090	24090					0.0859020752836841
KITRSAGH	8	Unmodified	_KITRSAGH_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-6|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2528381347656	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.89962	1	7058	7058		38.806	3.6054	1	2494100	+		20857	29947	14098	14108	24091	24091					0.04839453677379879
KITSTRLL	8	Unmodified	_KITSTRLL_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.3016662597656	2	466.300384	930.586216	-0.00085078	-3.9672E-07	0.012307	5.7388E-06	0.011456	5.3421E-06	466.3004139116976	17.005	0.21519	16.394	16.305	16.52	-0.6107					6	4	2	0	0	0	0.89494	1	206	206		37.159	3.6435	1	39938			20858	5094	14099	14109	24092	24092					0.11814637202553513
KITSTRLL	8	Unmodified	_KITSTRLL_					0	0	0		nc|ENSG00000151093|Q9NWU1-2|OXSM;ENSG00000151093|ENST00000280701|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	nc|ENSG00000151093|Q9NWU1-2|OXSM	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	466.300384	930.586216	0.18821	8.7763E-05	0.11931	5.5632E-05	0.30752	0.00014339	466.3003697153418	16.977	0.15896	16.493	16.371	16.53	-0.48461	0.049302	5.1048E-05	NaN	37.159	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29623			20859	5094	14099	14109							0.11814637202553513
KIVAVRAL	8	Unmodified	_KIVAVRAL_					0	0	0			REV__ENSG00000213625|ENST00000371065|LEPROT	REV__ENSG00000213625|ENST00000371065|LEPROT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.29998779296875	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.80706	1	7256	7256		19.36	1.0356	1	1921500	+		20860	23624	14100	14110	24093	24093					0.14627262273359065
KIVDGKRGT	9	Unmodified	_KIVDGKRGT_					0	0	0			REV__ENST00000414718.1_1_20:12360810-12361446:+|nuORF	REV__ENST00000414718.1_1_20:12360810-12361446:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.2928466796875	2	487.293091	972.571629	-0.70314	-0.00034264	0.88419	0.00043086	0.18105	8.8225E-05	487.29338906256316	90.865	2.6767	91.083	90.551	93.228	0.21736					133	64	3	0	0	0	0.78983	1	9155	9155		27.882	3.6795	1	1731200	+		20861	26409	14101	14111	24094	24094					0.08424565054417599
KIVDVAVTQ	9	Unmodified	_KIVDVAVTQ_					0	0	0			REV__ENST00000419888.1_1_20:18763070-18763415:-|nuORF	REV__ENST00000419888.1_1_20:18763070-18763415:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.8130187988281	2	486.78985	971.565146	-0.4	-0.00019472	2.5997	0.0012655	2.1997	0.0010708	486.79125328347783	31.882	0.89926	32.008	31.691	32.59	0.12643					28	20	2	0	0	0	0.18457	1	2228	2228		87.696	0	1	99846	+		20862	25451	14102	14112	24095	24095					0.07822627103041668
KIVDVAVTQ	9	Unmodified	_KIVDVAVTQ_					0	0	0			REV__ENST00000419888.1_1_20:18763070-18763415:-|nuORF	REV__ENST00000419888.1_1_20:18763070-18763415:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.81329345703125	2	486.78985	971.565146	0.45925	0.00022356	-1.3027	-0.00063414	-0.84346	-0.00041059	486.7894311361359	31.851	0.81366	31.958	31.675	32.488	0.10707					29	18	2	0	0	0	0.034797	1	2269	2269		104.06	10.914	1	114910	+		20863	25451	14102	14112	24096	24096					0.07822627103041668
KIVDVAVTQ	9	Unmodified	_KIVDVAVTQ_					0	0	0			REV__ENST00000419888.1_1_20:18763070-18763415:-|nuORF	REV__ENST00000419888.1_1_20:18763070-18763415:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	486.78985	971.565146	0.16942	8.2473E-05	0.19995	9.7332E-05	0.36937	0.00017981	486.7900678900265	31.971	0.12375	32.082	32.006	32.13	0.11117	0.065708	-4.48E-05	NaN	104.06	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68122	+		20864	25451	14102	14112							0.07822627103041668
KIVELLPA	8	Unmodified	_KIVELLPA_					0	0	0			REV__ENSG00000165392|ENST00000298139|WRN	REV__ENSG00000165392|ENST00000298139|WRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7860412597656	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.85787	1	2976	2976		9.4706	1.2393	1	12523000	+		20865	21180	14103	14113	24097	24097					0.11308733942314575
KIVGMTSFLGL	11	Unmodified	_KIVGMTSFLGL_					0	0	0		chr12:18143293-18198401|18|114.39|0.0|23.45|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|38;chr12:18143293-18198304|14|75.14|0.0|22.84|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198304,18203231|RERGL,None|38;chr12:18143293-18197336|19|33.89|0.0|21.69|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|38;chr12:18088956-18198401|14|92.57|0.0|23.14|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|38;chr12:18088956-18197336|15|76.93|0.0|22.88|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|38	chr12:18143293-18198401|18|114.39|0.0|23.45|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|38	chr12:18143293-18198401|18|114.39|0.0|23.45|-|0|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|38	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.8334350585938	2	583.33611	1164.65767	0.39524	0.00023056	-3.9394	-0.002298	-3.5441	-0.0020674	583.33361700522	94.588	0.63826	95.02	94.801	95.439	0.43241					20	14	2	0	0	0	0.17552	1	11263	11263		17.468	0	1	176390			20866	118	14104	14114	24098	24098					0.08192388844918241
KIVIEPAL	8	Unmodified	_KIVIEPAL_					0	0	0			REV__ENSG00000053900|ENST00000315368|ANAPC4	REV__ENSG00000053900|ENST00000315368|ANAPC4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.93878173828125	2	441.786579	881.558604	-0.63388	-0.00028004	2.6618	0.001176	2.0279	0.00089592	441.7874265842793	55.186	0.32521	55.149	54.918	55.243	-0.036827					11	8	2	0	0	0	0.4196	1	4591	4591		10.866	0	1	43163	+		20867	16393	14105	14115	24099	24099					0.11308733942303206
KIVIKNKFLIF	11	Unmodified	_KIVIKNKFLIF_					0	0	0			REV__nc|ENSG00000181381|Q5H9U9-2|DDX60L	REV__nc|ENSG00000181381|Q5H9U9-2|DDX60L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.7839660644531	3	454.967236	1361.87988	-2.5253	-0.0011489	2.1212	0.00096508	-0.4041	-0.00018385	454.96807059465226	41.805	0.86062	42.219	42.085	42.946	0.4139					28	21	2	0	0	0	0.17375	1	3758	3758		13.508	0	1	204540	+		20868	22455	14106	14116	24100	24100					0.21341411252569742
KIVIKNKFLIF	11	Unmodified	_KIVIKNKFLIF_					0	0	0			REV__nc|ENSG00000181381|Q5H9U9-2|DDX60L	REV__nc|ENSG00000181381|Q5H9U9-2|DDX60L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.7842712402344	3	454.967236	1361.87988	-1.722	-0.00078344	1.788	0.0008135	0.066065	3.0057E-05	455.3026730547345	41.826	0.58331	42.46	42.244	42.827	0.6339					20	14	2	0	0	0	0.18066	1	3719	3719		14.086	8.085	1	236180	+		20869	22455	14106	14116	24101	24101					0.21341411252569742
KIVKELFGV	9	Unmodified	_KIVKELFGV_					0	0	0			REV__ENST00000216797.9_1_14:35870881-35871004:-|nuORF	REV__ENST00000216797.9_1_14:35870881-35871004:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7778930664062	2	516.826235	1031.63792	-0.52755	-0.00027265	0.79343	0.00041007	0.26588	0.00013741	516.8264342861904	47.339	0.71951	47.811	47.476	48.196	0.47139					36	17	3	0	0	0	0.20789	1	4518	4518		53.351	7.3995	1	676580	+		20870	24138	14107	14117	24102	24102					0.12336380896454102
KIVKGKPREKA	11	Unmodified	_KIVKGKPREKA_					0	0	0			REV__nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	REV__nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.6037292480469	3	418.60659	1252.79794	-1.7442	-0.00073012	-2.6386	-0.0011045	-4.3828	-0.0018347	418.60537062211796	49.043	4.3192	49.043	47.911	52.23	0					175	108	3	0	0	0	0.76892	1	3933	3933		17.833	1.3033	1	101990	+		20871	15460	14108	14118	24103	24103					0.18165308893526344
KIVLRRHLS	9	Unmodified	_KIVLRRHLS_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.3629150390625	2	561.366924	1120.7193	-1.2272	-0.00068889	-4.3413	-0.0024371	-5.5685	-0.003126	561.3643862619919	45.972	0.98896	45.972	45.502	46.491	0					58	25	3	0	0	0	0.76255	1	3458	3458		35.618	5.1146	1	208060			20872	2161;12487	14109	14119	24104	24104					0.1637650137906803
KIVPIKDIRN	10	Unmodified	_KIVPIKDIRN_					0	0	0		ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF	ENSG00000119912|ENST00000265986|IDE	ENSG00000119912|ENST00000265986|IDE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.3780517578125	2	598.379697	1194.74484	0.38806	0.00023221	2.9197	0.0017471	3.3077	0.0019793	598.3812845043491	40.552	1.126	40.504	40.15	41.276	-0.04789					105	43	3	0	0	0	0.86218	1	2585	2585		32.812	7.2384	1	664060			20873	3102	14110	14120	24105	24105					0.15525931110823876
KIVPKISYAS	10	Unmodified	_KIVPKISYAS_					0	0	0		ENSG00000108256|ENST00000225388|NUFIP2	ENSG00000108256|ENST00000225388|NUFIP2	ENSG00000108256|ENST00000225388|NUFIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3323364257812	2	553.334424	1104.6543	-0.75754	-0.00041917	-2.8743	-0.0015905	-3.6319	-0.0020096	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.8608	1	10233	10233		34.173	3.8548	1	4355400			20874	2396	14111	14121	24106	24106					0.10615462062560255
KIVSITERA	9	Unmodified	_KIVSITERA_					0	0	0		ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.80780029296875	2	508.808574	1015.60259	0.84861	0.00043178	-3.1233	-0.0015892	-2.2747	-0.0011574	508.8072597473503	83.541	2.7911	83.472	82.015	84.806	-0.069313					129	64	3	0	0	0	0.78528	1	8506	8506		29.17	2.4771	1	2497800			20875	1034	14112	14122	24107	24107					0.09541718368654983
KIVSITERA	9	Unmodified	_KIVSITERA_					0	0	0		ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	ENSG00000056097|ENST00000265069|ZFR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.8077087402344	2	508.808574	1015.60259	0.65318	0.00033234	-2.4261	-0.0012344	-1.7729	-0.00090206	508.80731297639136	83.188	1.9706	83.335	82.631	84.602	0.14695					106	45	4	0	0	0	0.7932	2	8068	8055;8068		26.693	4.733	1	3797600			20876	1034	14112	14122	24108;24109	24109					0.09541718368654983
KIVSPCDGPSK	11	Unmodified	_KIVSPCDGPSK_					0	0	0		ENSG00000179833|ENST00000313349|SERTAD2	ENSG00000179833|ENST00000313349|SERTAD2	ENSG00000179833|ENST00000313349|SERTAD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.7950439453125	2	565.797349	1129.58014	0.55993	0.00031681	-3.0114	-0.0017038	-2.4514	-0.001387	565.7956122725219	67.048	0.93106	67.599	67.315	68.246	0.55071					51	25	3	0	0	0	0.66009	1	7368	7368		37.508	0.34906	1	1292700			20877	7296	14113	14123	24110	24110					0.02053750908726215
KIVSTTNFKL	10	Unmodified	_KIVSTTNFKL_					0	0	0			REV__ENST00000586276.5_1_17:42931463-42937758:-|nuORF	REV__ENST00000586276.5_1_17:42931463-42937758:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8435668945312	2	575.845156	1149.67576	-0.31832	-0.0001833	-2.5048	-0.0014424	-2.8232	-0.0016257	575.8434817330223	103.97	0.85896	103.97	103.68	104.54	0					49	21	4	0	0	0	0.82886	1	10690	10690		37.812	2.6595	1	337380	+		20878	29102	14114	14124	24111	24111					0.10690847091268552
KIVTLVPA	8	Unmodified	_KIVTLVPA_					0	0	0		nc|ENSG00000253117|Q02509-3|OC90;ENSG00000253117|ENST00000254627|OC90	nc|ENSG00000253117|Q02509-3|OC90	nc|ENSG00000253117|Q02509-3|OC90	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.781982421875	2	420.781296	839.54804	1.1628	0.0004893	2.3373	0.0009835	3.5001	0.0014728	420.78214997955024	36.177	1.3125	36.186	35.614	36.926	0.0092773					54	28	2	0	0	0	0.85277	1	2337	2337		25.45	1.2474	1	98796			20879	15289	14115	14125	24112	24112					0.1218475128788441
KIVVSVTDC	9	Unmodified	_KIVVSVTDC_					0	0	0		nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;nc|ENSG00000107736|Q9H251-6|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.8105163574219	2	482.26261	962.510668	-0.29985	-0.0001446	-4.121	-0.0019874	-4.4208	-0.002132	482.2602752517923	30.115	0.65323	30.026	29.833	30.486	-0.089544					21	14	2	0	0	0	0.20789	1	2002	2002		19.997	0	1	124390			20880	2362	14116	14126	24113	24113					0.02791291959965747
KIVVSVTDC	9	Unmodified	_KIVVSVTDC_					0	0	0		nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;nc|ENSG00000107736|Q9H251-6|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	482.26261	962.510668	-0.62656	-0.00030216	-2.7002	-0.0013022	-3.3268	-0.0016044	482.26085185555644	29.957	0.39433	29.986	29.791	30.185	0.028618	-0.020118	0.00070218	NaN	26.693	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109820			20881	2362	14116	14126							0.02791291959965747
KIWDIKTGQ	9	Unmodified	_KIWDIKTGQ_					0	0	0		ENSG00000109670|ENST00000281708|FBXW7;nc|ENSG00000109670|Q969H0-4|FBXW7;nc|ENSG00000109670|Q969H0-2|FBXW7;ENST00000603821.1_1_4:153245147-153245528:-|nuORF	ENSG00000109670|ENST00000281708|FBXW7	ENSG00000109670|ENST00000281708|FBXW7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.8065185546875	2	544.808574	1087.60259	0.026613	1.4499E-05	-3.8164	-0.0020792	-3.7898	-0.0020647	544.8064273929182	24.934	1.2168	24.992	24.613	25.83	0.058189					124	57	4	0	0	0	0.18338	1	877	877		77.318	2.2743	1	915340			20882	2473	14117	14127	24114	24114					0.062297183686723656
KIWGILLA	8	Unmodified	_KIWGILLA_					0	0	0		ENSG00000181562|ENST00000326842|EDDM3A	ENSG00000181562|ENST00000326842|EDDM3A	ENSG00000181562|ENST00000326842|EDDM3A	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3010559082031	2	457.297114	912.579674	-1.7716	-0.00081013	-3.5714	-0.0016332	-5.343	-0.0024433	457.2954750452712	46.279	0.67715	46.279	45.98	46.658	0					26	17	2	0	0	0	0.4196	1	3506	3506		37.028	0	1	83976			20883	7394	14118	14128	24115	24115					0.1198874404185517
KIWGSLGQITD	11	Unmodified	_KIWGSLGQITD_					0	0	0		nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-6|NF1;ENSG00000196712|ENST00000358273|NF1;ENST00000579081.5_2_17:29626598-29701170:+|nuORF	nc|ENSG00000196712|P21359-2|NF1	nc|ENSG00000196712|P21359-2|NF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7852478027344	3	406.555672	1216.64519	-0.34203	-0.00013906	-2.8769	-0.0011696	-3.219	-0.0013087	406.55448474428925	29.811	0.31697	29.768	29.555	29.872	-0.043095					9	6	2	0	0	0	0.17363	1	1557	1557		19.627	0	1	21215			20884	8095	14119	14129	24116	24116					0.04553068706218255
KIWQITPIPK	10	Unmodified	_KIWQITPIPK_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	409.2691345214844	3	408.588536	1222.74378	0.012697	5.1878E-06	3.2837	0.0013417	3.2964	0.0013469	408.59011512911695	16.496	0.23054	16.555	16.462	16.692	0.059269					11	8	2	0	0	0	0.37624	1	168	168		8.7993	0	1	51927	+		20885	20437;29946	14120	14130	24117	24117					0.14131716741917444
KIYGKKVDD	9	Unmodified	_KIYGKKVDD_					0	0	0			REV__nc|ENSG00000143376|Q96L92-2|SNX27	REV__nc|ENSG00000143376|Q96L92-2|SNX27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.8009033203125	2	533.300581	1064.58661	0.1514	8.0741E-05	-0.40428	-0.0002156	-0.25288	-0.00013486	533.300326680182	31.208	2.416	31.212	29.926	32.342	0.0037212					110	55	4	0	0	0	0.48102	1	2104	2104		52.937	14.183	1	756110	+		20886	19800	14121	14131	24118	24118					0.05690012131753974
KIYKYKKVLSN	11	Unmodified	_KIYKYKKVLSN_					0	0	0		nc|ENSG00000153815|Q8IY22-3|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;ENSG00000153815|ENST00000537098|CMIP	nc|ENSG00000153815|Q8IY22-3|CMIP	nc|ENSG00000153815|Q8IY22-3|CMIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.9487609863281	3	461.950134	1382.82857	-1.7389	-0.00080328	-2.2007	-0.0010166	-3.9396	-0.0018199	461.9491276210282	107.85	0.72025	107.89	107.25	107.97	0.036125					70	17	5	0	0	0	0.75779	1	11532	11532		20.315	4.9819	1	82858000			20887	5243	14122	14132	24119	24119					0.15247042487908402
KIYLYSYGEK	10	Unmodified	_KIYLYSYGEK_					0	0	0			REV__nc|ENSG00000211805|A0A0B4J272|TRAV24	REV__nc|ENSG00000211805|A0A0B4J272|TRAV24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.8913879394531	3	421.892173	1262.65469	0.2151	9.0749E-05	-2.2047	-0.00093014	-1.9896	-0.00083939	421.89119617428577	29.171	1.018	29.193	28.86	29.878	0.021851					131	50	4	0	0	0	0.85692	1	1210	1210		36.318	1.1656	1	799910	+		20888	30189	14123	14133	24120	24120					0.03386836991739983
KIYNSRVQR	9	Unmodified	_KIYNSRVQR_					0	0	0		ENSG00000162783|ENST00000367577|IER5	ENSG00000162783|ENST00000367577|IER5	ENSG00000162783|ENST00000367577|IER5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3353881835938	2	582.335821	1162.65709	-0.42207	-0.00024579	0.66388	0.0003866	0.2418	0.00014081	582.3360730171839	20.278	0.90201	19.648	19.305	20.207	-0.6296					47	19	4	0	0	0	0.44421	1	638	638		54.776	8.3195	1	811170			20889	5739	14124	14134	24121	24121					0.0822673024008509
KKAAHLQST	9	Unmodified	_KKAAHLQST_					0	0	0			REV__nc|ENSG00000119242|Q53HC0-2|CCDC92	REV__nc|ENSG00000119242|Q53HC0-2|CCDC92	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.2882080078125	2	492.285266	982.555979	5.5423	0.0027284	-0.1894	-9.3241E-05	5.3529	0.0026352	492.2850026312267	110.46	0.92664	110.53	110.23	111.16	0.068001					58	34	2	0	0	0	0.77244	1	13424	13424		32.812	0.85756	1	236270	+		20890	18345	14125	14135	24122	24122					0.06400278537353188
KKAALKLK	8	Unmodified	_KKAALKLK_					0	0	0			REV__ENST00000367837.9_1_6:135286264-135286420:-|nuORF	REV__ENST00000367837.9_1_6:135286264-135286420:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2734375	2	450.323663	898.632772	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.03	1	116.09	115.59	116.59	0.05954								0	0	0	0.3037	1	12337	12337		18.324	0.95945	1		+		20891	25580	14126	14136	24123	24123					0.1794012182449478
KKAASSSK	8	Unmodified	_KKAASSSK_					0	0	0		nc|ENSG00000153113|P20810-3|CAST;nc|ENSG00000153113|P20810-4|CAST;nc|ENSG00000153113|P20810-8|CAST;nc|ENSG00000153113|P20810-2|CAST;nc|ENSG00000153113|P20810|CAST;nc|ENSG00000153113|P20810-9|CAST;nc|ENSG00000153113|P20810-5|CAST;nc|ENSG00000153113|P20810-10|CAST;nc|ENSG00000153113|P20810-7|CAST;ENSG00000153113|ENST00000675179|CAST	nc|ENSG00000153113|P20810-3|CAST	nc|ENSG00000153113|P20810-3|CAST	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.2091064453125	2	403.74016	805.465767	2.9233	0.0011802	-4.0323	-0.001628	-1.109	-0.00044776	403.7384710528719	85.707	1.0275	85.765	85.414	86.441	0.057899					36	23	2	0	0	0	0.4196	1	8713	8713		6.3127	0.39155	1	136480			20892	5214	14127	14137	24124	24124					0.055252292089562616
KKADDKRP	8	Unmodified	_KKADDKRP_					0	0	0			REV__nc|ENSG00000132780|P49321-2|NASP	REV__nc|ENSG00000132780|P49321-2|NASP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2774658203125	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.89962	1	9751	9751		38.806	0	1	5642300	+		20893	19030	14128	14138	24125	24125					0.06031992020314192
KKADVLQRA	9	Unmodified	_KKADVLQRA_					0	0	0			REV__ENST00000479659.5_1_1:1561777-1565907:+|nuORF	REV__ENST00000479659.5_1_1:1561777-1565907:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.8146362304688	2	514.81419	1027.61383	0.52238	0.00026893	-0.90142	-0.00046406	-0.37904	-0.00019514	514.8137347167254	16.636	0.88589	16.026	15.82	16.706	-0.6107					51	19	5	0	0	0	0.6204	1	183	183		45.972	5.1941	1	3645200	+		20894	23241	14129	14139	24126	24126					0.1011254046279646
KKAEAFQLY	9	Unmodified	_KKAEAFQLY_					0	0	0		ENST00000487376.5_1_6:30695895-30698542:-|nuORF;nc|ENSG00000137312|O75955-2|FLOT1;ENSG00000137312|ENST00000376389|FLOT1	ENST00000487376.5_1_6:30695895-30698542:-|nuORF	ENST00000487376.5_1_6:30695895-30698542:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.2999877929688	2	549.303124	1096.5917	-0.328	-0.00018017	-3.5335	-0.0019409	-3.8615	-0.0021211	549.3009501569451	25.188	0.49111	24.86	24.613	25.104	-0.32825					21	10	3	0	0	0	0.51307	1	1280	1280		51.335	9.9088	1	179850			20895	4189	14130	14140	24127	24127					0.04726315994366814
KKAEAFQLY	9	Unmodified	_KKAEAFQLY_					0	0	0		ENST00000487376.5_1_6:30695895-30698542:-|nuORF;nc|ENSG00000137312|O75955-2|FLOT1;ENSG00000137312|ENST00000376389|FLOT1	ENST00000487376.5_1_6:30695895-30698542:-|nuORF	ENST00000487376.5_1_6:30695895-30698542:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	549.303124	1096.5917	2.2369	0.0012287	-5.7857	-0.0031781	-3.5487	-0.0019493	549.2996385998348	25.131	0.73757	24.7	24.454	25.191	-0.4311	-0.080293	-0.0015048	NaN	51.335	25	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165070			20896	4189	14130	14140							0.04726315994366814
KKAEKNGLRGV	11	Unmodified	_KKAEKNGLRGV_					0	0	0			REV__ENSG00000160294|ENST00000291688|MCM3AP	REV__ENSG00000160294|ENST00000291688|MCM3AP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5802307128906	3	400.578811	1198.7146	2.0292	0.00081285	1.8703	0.0007492	3.8995	0.001562	400.57946225825975	20.455	0.9392	19.996	19.641	20.58	-0.4591					46	21	3	0	0	0	0.64964	1	661	661		38.714	3.5359	1	275000	+		20897	20711	14131	14141	24128	24128					0.12319572445630911
KKAEKNGLRGV	11	Unmodified	_KKAEKNGLRGV_					0	0	0			REV__ENSG00000160294|ENST00000291688|MCM3AP	REV__ENSG00000160294|ENST00000291688|MCM3AP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.580078125	3	400.578811	1198.7146	-0.13625	-5.4579E-05	4.1551	0.0016644	4.0188	0.0016099	400.5803754100224	20.669	0.84843	20.039	19.673	20.521	-0.6296					51	20	4	0	0	0	0.45515	1	666	666		55.084	1.995	1	284940	+		20898	20711	14131	14141	24129	24129					0.12319572445630911
KKAFLRAL	8	Unmodified	_KKAFLRAL_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR;ENST00000509961.5_1_5:7885900-7890405:+|nuORF	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	473.5609130859375	2	473.813462	945.612371	-1.0335	-0.00048969	-0.98601	-0.00046718	-2.0195	-0.00095688	473.8135057834134	17.541	0.73113	17.586	17.241	17.972	0.0457					49	37	2	0	0	0	0.4196	1	243	243		26.796	6.3143	1	104450			20899	3326	14132	14142	24130	24130					0.1373895116469157
KKAFRYHPSL	10	Unmodified	_KKAFRYHPSL_					0	0	0		nc|ENSG00000171291|Q8NDP4|ZNF439;ENSG00000171291|ENST00000682736|ZNF439	nc|ENSG00000171291|Q8NDP4|ZNF439	nc|ENSG00000171291|Q8NDP4|ZNF439	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.9252014160156	3	416.240018	1245.69823	-0.083258	-3.4655E-05	2.8235	0.0011752	2.7402	0.0011406	416.2416548248885	28.507	0.27383	28.41	28.184	28.458	-0.096947					9	6	2	0	0	0	0.37624	1	1715	1715		37.508	14.13	1	38197			20900	6653	14133	14143	24131	24131					0.0852049127954615
KKAHETKAEII	11	Unmodified	_KKAHETKAEII_					0	0	0		ENSG00000137628|ENST00000393743|DDX60	ENSG00000137628|ENST00000393743|DDX60	ENSG00000137628|ENST00000393743|DDX60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3762817382812	2	634.372069	1266.72959	6.6614	0.0042258	1.1149	0.00070728	7.7763	0.0049331	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.74763	1	13332	13332		22.58	0	1	7041100			20901	4218	14134	14144	24132	24132					0.10689019522988019
KKAILPRM	8	Unmodified	_KKAILPRM_					0	0	0			REV__nc|ENSG00000170004|Q12873-3|CHD3	REV__nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8068542480469	2	478.807322	955.600092	-1.7576	-0.00084154	-0.70314	-0.00033667	-2.4607	-0.0011782	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.85277	1	2585	2585		25.45	0	1	336090	+		20902	30022	14135	14145	24133	24133					0.12051591430008557
KKAILPRM	8	Unmodified	_KKAILPRM_					0	0	0			REV__nc|ENSG00000170004|Q12873-3|CHD3	REV__nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8044128417969	2	478.807322	955.600092	-1.7281	-0.00082743	-1.5753	-0.00075426	-3.3034	-0.0015817	478.806439205216	41.295	1.2034	41.295	40.815	42.018	0					75	35	3	0	0	0	0.87922	1	2794	2794		31.955	6.5047	1	280900	+		20903	30022	14135	14145	24134	24134					0.12051591430008557
KKAILPRM	8	Unmodified	_KKAILPRM_					0	0	0			REV__nc|ENSG00000170004|Q12873-3|CHD3	REV__nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8059387207031	2	478.807322	955.600092	-2.669	-0.0012779	-0.055798	-2.6716E-05	-2.7248	-0.0013047	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.80706	1	2775	2775		19.36	1.995	1	370420	+		20904	30022	14135	14145	24135	24135					0.12051591430008557
KKAKDKDVE	9	Unmodified	_KKAKDKDVE_					0	0	0		nc|ENSG00000179364|Q86VP3-4|PACS2;nc|ENSG00000179364|Q86VP3|PACS2;ENSG00000179364|ENST00000447393|PACS2;ENST00000550790.1_1_14:105858932-105859698:+|nuORF;ENST00000551801.1_1_14:105857872-105861006:+|nuORF;ENST00000551743.5_1_14:105849507-105861006:+|nuORF	nc|ENSG00000179364|Q86VP3-4|PACS2	nc|ENSG00000179364|Q86VP3-4|PACS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8008422851562	2	530.803488	1059.59242	1.1393	0.00060472	-4.138	-0.0021964	-2.9987	-0.0015917	530.8010889250351	19.104	0.76083	18.634	18.495	19.256	-0.46967					33	16	3	0	0	0	0.76764	1	482	482		34.173	3.6689	1	252180			20905	7267	14136	14146	24136	24136					0.0650111064342127
KKAKIKPG	8	Unmodified	_KKAKIKPG_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2998962402344	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.86294	1	6736	6736		8.8223	0.59103	1	1680500	+		20906	18623	14137	14147	24137	24137					0.14627262273359065
KKAKIKPG	8	Unmodified	_KKAKIKPG_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3001403808594	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.82419	1	6959	6959		13.775	1.5685	1	1702600	+		20907	18623	14137	14147	24138	24138					0.14627262273359065
KKAKIKPG	8	Unmodified	_KKAKIKPG_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30010986328125	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81724	3	6848	6848;6897;6913		14.664	1.7803	1	1921500	+		20908	18623	14137	14147	24139;24140;24141	24139					0.14627262273359065
KKAKIKPG	8	Unmodified	_KKAKIKPG_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3000793457031	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.82419	1	6893	6893		13.775	0.81615	1	2081500	+		20909	18623	14137	14147	24142	24142					0.14627262273359065
KKAKIKPG	8	Unmodified	_KKAKIKPG_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.29998779296875	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.82464	1	6481	6481		21.702	7.0382	1	1852500	+		20910	18623	14137	14147	24143	24143					0.14627262273359065
KKAKIKPG	8	Unmodified	_KKAKIKPG_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2998046875	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82419	1	7720	7720		13.775	0.81615	1	5485100	+		20911	18623	14137	14147	24144	24144					0.14627262273359065
KKAKIKPG	8	Unmodified	_KKAKIKPG_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30023193359375	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.85787	2	7885	7718;7885		9.4706	0.64823	1	6323600	+		20912	18623	14137	14147	24145;24146	24146					0.14627262273359065
KKAKKAVP	8	Unmodified	_KKAKKAVP_					0	0	0			REV__ENSG00000166197|ENST00000605788|NOLC1	REV__ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3002014160156	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.86294	1	6525	6525		8.8223	0	1	1072400	+		20913	21266	14138	14148	24147	24147					0.14627262273359065
KKAKKAVP	8	Unmodified	_KKAKKAVP_					0	0	0			REV__ENSG00000166197|ENST00000605788|NOLC1	REV__ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.30035400390625	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.82419	1	6662	6662		13.775	0	1	2081500	+		20914	21266	14138	14148	24148	24148					0.14627262273359065
KKAKKAVP	8	Unmodified	_KKAKKAVP_					0	0	0			REV__ENSG00000166197|ENST00000605788|NOLC1	REV__ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3004150390625	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.81724	1	8124	8124		14.664	0.88877	1	5485100	+		20915	21266	14138	14148	24149	24149					0.14627262273359065
KKAKKRVK	8	Unmodified	_KKAKKRVK_					0	0	0			REV__ENSG00000100425|ENST00000404760|BRD1	REV__ENSG00000100425|ENST00000404760|BRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.35272216796875	2	493.353286	984.692019	2.8482	0.0014052	-3.2954	-0.0016258	-0.44719	-0.00022062	493.35151589544125	109.11	0.44239	109.08	108.79	109.23	-0.029388					23	16	2	0	0	0	0.83058	2	12093	12093;12107		12.959	4.1369	1	2398900	+		20916	17193	14139	14149	24150;24151	24150					0.1990601783869579
KKAKVRKK	8	Unmodified	_KKAKVRKK_					0	0	0			REV__ENSG00000189134|ENST00000343684|NKAPL	REV__ENSG00000189134|ENST00000343684|NKAPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.3525695800781	2	493.353286	984.692019	0.79606	0.00039274	-1.4818	-0.00073105	-0.68574	-0.00033831	493.3524248289005	109.09	0.29906	109.17	108.94	109.24	0.078552					22	12	2	0	0	0	0.82419	1	11726	11726		13.775	4.953	1	1211100	+		20917	23068	14140	14150	24152	24152					0.1990601783869579
KKAKVRKK	8	Unmodified	_KKAKVRKK_					0	0	0			REV__ENSG00000189134|ENST00000343684|NKAPL	REV__ENSG00000189134|ENST00000343684|NKAPL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	493.353286	984.692019	-0.74621	-0.00036815	0.14882	7.3419E-05	-0.5974	-0.00029473	493.35316065974746	109.08	0.38199	109.11	108.85	109.24	0.033089	-0.013688	0.0029108	NaN	13.775	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2111600	+		20918	23068	14140	14150							0.1990601783869579
KKAKVRKK	8	Unmodified	_KKAKVRKK_					0	0	0			REV__ENSG00000189134|ENST00000343684|NKAPL	REV__ENSG00000189134|ENST00000343684|NKAPL	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	493.353286	984.692019	0.79606	0.00039274	-1.4818	-0.00073105	-0.68574	-0.00033831	493.3524248289005	109.09	0.29906	109.17	108.94	109.24	0.078552	0.049229	0.0013018	NaN	13.775	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1211100	+		20919	23068	14140	14150							0.1990601783869579
KKAKVRKK	8	Unmodified	_KKAKVRKK_					0	0	0			REV__ENSG00000189134|ENST00000343684|NKAPL	REV__ENSG00000189134|ENST00000343684|NKAPL	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	493.353286	984.692019	5.0209	0.0024771	-5.8605	-0.0028913	-0.83961	-0.00041422	493.3503010953059	109.04	0.43249	109.13	108.85	109.28	0.090057	0.0061613	-0.0030187	NaN	13.775	25	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	506280	+		20920	23068	14140	14150							0.1990601783869579
KKALSKFLQHL	11	Unmodified	_KKALSKFLQHL_					0	0	0		ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.27301025390625	3	438.27484	1311.80269	-0.96199	-0.00042161	-3.3249	-0.0014572	-4.2869	-0.0018788	438.2732841967114	107.57	0.99143	107.57	106.84	107.83	0					91	23	5	0	0	0	0.71803	2	11127	11127;11173		28.577	6.0151	1	3871200			20921	10133	14141	14151	24153;24154	24153					0.15926193036261793
KKALSKFLQHL	11	Unmodified	_KKALSKFLQHL_					0	0	0		ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.27288818359375	3	438.27484	1311.80269	-0.15875	-6.9576E-05	-4.0352	-0.0017685	-4.1939	-0.0018381	438.2729904466262	106.56	0.95083	106.53	106.1	107.05	-0.025146					93	21	6	0	0	0	0.68431	5	11549	11549;11584;11597;11608;11621		34.087	10.709	1	4356100			20922	10133	14141	14151	24155;24156;24157;24158;24159	24155					0.15926193036261793
KKALSKFLQHL	11	Unmodified	_KKALSKFLQHL_					0	0	0		ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2730407714844	3	438.27484	1311.80269	-0.15875	-6.9576E-05	-4.1609	-0.0018236	-4.3197	-0.0018932	438.27291084215926	107.41	0.8759	107.38	106.95	107.82	-0.034409					90	20	5	0	0	0	0.71803	3	11645	11632;11645;11670		28.577	2.5179	1	4015900			20923	10133	14141	14151	24160;24161;24162	24161					0.15926193036261793
KKALSKFLQHL	11	Unmodified	_KKALSKFLQHL_					0	0	0		ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2732238769531	3	438.27484	1311.80269	-1.4635	-0.00064141	-2.7666	-0.0012125	-4.2301	-0.001854	438.27353644756727	106.01	0.81467	106.16	105.83	106.65	0.14843					89	19	6	0	0	0	0.71803	3	11355	11307;11319;11355		28.577	2.5179	1	14795000			20924	10133	14141	14151	24163;24164;24165	24165					0.15926193036261793
KKALSKFLQHL	11	Unmodified	_KKALSKFLQHL_					0	0	0		ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.27301025390625	3	438.27484	1311.80269	-1.4634	-0.00064136	-2.9517	-0.0012937	-4.4151	-0.001935	438.2734550831373	106.96	1.4325	107.1	106.6	108.03	0.14105					150	35	5	0	0	0	0.68431	2	11535	11521;11535		34.087	9.8547	1	5372900			20925	10133	14141	14151	24166;24167	24167					0.15926193036261793
KKALSKFLQHL	11	Unmodified	_KKALSKFLQHL_					0	0	0		ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	ENST00000333050.6_1_16:8889558-8889804:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2732238769531	3	438.27484	1311.80269	-1.8129	-0.00079457	-2.3982	-0.0010511	-4.2111	-0.0018456	438.27366907360886	106.16	0.83208	106.21	105.86	106.69	0.053757					80	19	5	0	0	0	0.72374	2	11265	11265;11289		27.644	4.266	1	5030100			20926	10133	14141	14151	24168;24169	24168					0.15926193036261793
KKALVSGER	9	Unmodified	_KKALVSGER_					0	0	0			REV__nc|ENSG00000125319|Q8N3J3-3|HROB	REV__nc|ENSG00000125319|Q8N3J3-3|HROB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.3009948730469	2	494.300916	986.587279	-0.82421	-0.00040741	0.56645	0.00028	-0.25775	-0.00012741	494.3011394049625	97.613	4.008	97.613	96.986	100.99	0					359	95	6	0	0	0	0.7932	1	9935	9935		25.574	1.3713	1	29815000	+		20927	18634	14142	14152	24170	24170					0.09344851571472645
KKALWVSWF	9	Unmodified	_KKALWVSWF_					0	0	0		ENSG00000152128|ENST00000281924|TMEM163;nc|ENSG00000152128|Q8TC26-2|TMEM163	ENSG00000152128|ENST00000281924|TMEM163	ENSG00000152128|ENST00000281924|TMEM163	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.8316650390625	2	582.831852	1163.64915	-0.40613	-0.0002367	1.7704	0.0010319	1.3643	0.00079516	582.832911894326	94.456	2.7605	94.456	93.622	96.382	0					111	64	3	0	0	0	0.78536	1	9403	9403		29.15	1.2673	1	367730			20928	5157	14143	14153	24171	24171					0.0738720299061697
KKAMIVPA	8	Oxidation (M)	_KKAM(Oxidation (M))IVPA_		KKAM(1)IVPA		KKAM(55)IVPA	0	0	1		nc|ENSG00000133424|O95461-2|LARGE1;ENSG00000133424|ENST00000397394|LARGE1	nc|ENSG00000133424|O95461-2|LARGE1	nc|ENSG00000133424|O95461-2|LARGE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2656555175781	2	437.264956	872.515359	0.051124	2.2355E-05	1.2114	0.00052972	1.2626	0.00055208	437.26563820123806	25.538	2.1653	25.281	24.501	26.666	-0.25721					170	48	6	0	0	0	0.94132	1	1379	1379		54.765	6.8491	1	21512000			20929	3878	14144	14154	24172	24172					0.07400220893396181
KKAQEGGGSE	10	Unmodified	_KKAQEGGGSE_					0	0	0		ENST00000474985.5_1_2:33809845-33813599:-|nuORF;ENSG00000119812|ENST00000238823|FAM98A	ENST00000474985.5_1_2:33809845-33813599:-|nuORF	ENST00000474985.5_1_2:33809845-33813599:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.74481201171875	2	495.74617	989.477788	-0.19473	-9.6537E-05	-3.6313	-0.0018002	-3.826	-0.0018967	495.74414577371067	73.649	0.69046	74.208	73.984	74.674	0.55891					34	17	3	0	0	0	0.86587	1	8333	8333		29.17	0.020503	1	571520			20930	3098	14145	14155	24173	24173					-0.017371988385093573
KKAQIAIDI	9	Unmodified	_KKAQIAIDI_					0	0	0		ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.3116149902344	2	500.313492	998.612431	-0.53339	-0.00026686	0.64897	0.00032469	0.11558	5.7824E-05	500.31352313312107	78.706	0.69234	78.833	78.542	79.235	0.12695					47	19	3	0	0	0	0.48102	1	7421	7421		52.937	12.879	1	162420			20931	920	14146	14156	24174	24174					0.11306906374034043
KKAQVPLGR	9	Unmodified	_KKAQVPLGR_					0	0	0			REV__nc|ENSG00000205838|Q6PF05-2|TTC23L	REV__nc|ENSG00000205838|Q6PF05-2|TTC23L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8192443847656	2	498.819276	995.623999	-1.105	-0.00055119	0.98849	0.00049308	-0.1165	-5.8115E-05	498.81964627089155	38.847	1.2856	38.8	38.42	39.706	-0.047005					70	29	4	0	0	0	0.38563	1	2784	2784		58.782	10.822	1	968290	+		20932	23580	14147	14157	24175	24175					0.1260114818803686
KKARKVKHLD	10	Unmodified	_KKARKVKHLD_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.9338684082031	3	408.262935	1221.76697	-1.9384	-0.00079138	0.092831	3.7899E-05	-1.8456	-0.00075348	408.2628966215517	16.356	0.31291	16.404	16.266	16.579	0.047802					21	13	2	0	0	0	0.37624	1	132	132		25.126	0	1	94517			20933	2000	14148	14158	24176	24176					0.1649615557926154
KKATNLTRE	9	Unmodified	_KKATNLTRE_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8103637695312	2	530.809105	1059.60366	1.1286	0.00059909	1.3808	0.00073292	2.5094	0.001332	530.809677370789	97.489	1.2709	97.88	96.989	98.26	0.39065					54	30	2	0	0	0	0.55097	1	11776	11776		49.442	4.9105	1	597090			20934	8292	14149	14159	24177	24177					0.0762393273755606
KKATNLTRE	9	Unmodified	_KKATNLTRE_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	530.809105	1059.60366	0.80462	0.0004271	1.7737	0.00094148	2.5783	0.0013686	530.8095159281265	97.57	0.55856	97.731	97.502	98.06	0.16073	-0.044387	0.00025662	NaN	49.442	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46237			20935	8292	14149	14159							0.0762393273755606
KKATVTVE	8	Unmodified	_KKATVTVE_					0	0	0			REV__ENST00000432347.6_2_4:128996143-128999057:+|nuORF	REV__ENST00000432347.6_2_4:128996143-128999057:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2629089355469	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.8347	1	2821	2821		23.042	2.5607	1	2361100	+		20936	26633	14150	14160	24178	24178					0.07010669040232642
KKAWVSVTNN	10	Unmodified	_KKAWVSVTNN_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	573.8167114257812	2	573.81693	1145.61931	0.2907	0.00016681	-0.11062	-6.3478E-05	0.18007	0.00010333	573.816753391891	35.956	1.0187	36.059	35.47	36.489	0.10306					84	33	4	0	0	0	0.85981	1	1920	1920		35.152	8.4591	1	933610			20937	5333	14151	14161	24179	24179					0.05232219254617121
KKCILFLI	8	Unmodified	_KKCILFLI_					0	0	0		ENST00000338222.6_1_X:56592195-56592459:+|nuORF	ENST00000338222.6_1_X:56592195-56592459:+|nuORF	ENST00000338222.6_1_X:56592195-56592459:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.31427001953125	2	489.314449	976.614345	2.0542	0.0010051	-2.8684	-0.0014036	-0.81425	-0.00039842	489.3129287195053	95.274	2.0769	95.216	94.723	96.8	-0.057533					125	48	4	0	0	0	0.80963	1	10166	10166		15.636	1.8609	1	1409600			20938	10199	14152	14162	24180	24180					0.1251024385829851
KKCLETLAI	9	Unmodified	_KKCLETLAI_					0	0	0		ENST00000587602.5_1_19:1073185-1086002:+|nuORF;chr19:1071358-1073149|43|11.79|0.27|5.42|+|ENST00000543365|ARHGAP45,ARHGAP45;ENSG00000180448|ENST00000313093|ARHGAP45;nc|ENSG00000180448|Q92619-2|ARHGAP45	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8037414550781	2	509.801903	1017.58925	-0.054339	-2.7702E-05	3.6212	0.0018461	3.5668	0.0018184	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.76255	1	8635	8635		35.618	0	1	2906900			20939	262	14153	14163	24181	24181					0.08116144265045477
KKCLETLAI	9	Unmodified	_KKCLETLAI_					0	0	0		ENST00000587602.5_1_19:1073185-1086002:+|nuORF;chr19:1071358-1073149|43|11.79|0.27|5.42|+|ENST00000543365|ARHGAP45,ARHGAP45;ENSG00000180448|ENST00000313093|ARHGAP45;nc|ENSG00000180448|Q92619-2|ARHGAP45	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8041076660156	2	509.801903	1017.58925	-0.37726	-0.00019233	3.8775	0.0019768	3.5002	0.0017844	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.64922	1	8340	8340		44.117	1.6423	1	3415500			20940	262	14153	14163	24182	24182					0.08116144265045477
KKCLKVGMR	9	Unmodified	_KKCLKVGMR_					0	0	0		chr5:93585107-93585261|50|26.92|0.48|5.82|+|ENST00000647447|NR2F1,NR2F1;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1	chr5:93585107-93585261|50|26.92|0.48|5.82|+|ENST00000647447|NR2F1,NR2F1	chr5:93585107-93585261|50|26.92|0.48|5.82|+|ENST00000647447|NR2F1,NR2F1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.81787109375	2	531.817364	1061.62018	3.2614	0.0017345	-3.6239	-0.0019273	-0.36251	-0.00019279	531.8152553069001	101.24	0.81892	101.19	100.8	101.62	-0.049828					49	19	4	0	0	0	0.7932	1	10999	10999		21.96	2.5999	1	580610			20941	462	14154	14164	24183	24183					0.09183019098304612
KKCPALLQE	9	Carbamidomethyl (C)	_KKC(Carbamidomethyl (C))PALLQE_	KKC(1)PALLQE		KKC(41)PALLQE		0	1	0		ENSG00000025796|ENST00000369002|SEC63	ENSG00000025796|ENST00000369002|SEC63	ENSG00000025796|ENST00000369002|SEC63	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.803466796875	2	543.802434	1085.59032	-0.063732	-3.4657E-05	3.586	0.0019501	3.5223	0.0019154	543.8043058582952	16.47	0.23036	15.983	15.867	16.098	-0.48718					7	4	2	0	0	0	0.69624	1	136	136		40.778	10.46	1	123750			20942	867	14155	14165	24184	24184	10				0.05094358633959928
KKCQFPKKGT	10	Unmodified	_KKCQFPKKGT_					0	0	0			REV__ENSG00000197013|ENST00000358491|ZNF429	REV__ENSG00000197013|ENST00000358491|ZNF429	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8330078125	2	582.831526	1163.6485	-0.83199	-0.00048491	2.73	0.0015911	1.898	0.0011062	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.86763	1	9798	9798		26.693	4.1133	1	796430	+		20943	23186	14156	14166	24185	24185					0.07322040279245812
KKCQFPKKGT	10	Unmodified	_KKCQFPKKGT_					0	0	0			REV__ENSG00000197013|ENST00000358491|ZNF429	REV__ENSG00000197013|ENST00000358491|ZNF429	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8323974609375	2	582.831526	1163.6485	2.3168	0.0013503	-0.37374	-0.00021783	1.943	0.0011325	582.8313275695042	94.548	3.2085	94.489	93.331	96.54	-0.059212					184	75	3	0	0	0	0.86348	2	10099	10064;10099		31.53	0.12388	1	663000	+		20944	23186	14156	14166	24186;24187	24187					0.07322040279245812
KKCQFPKKGT	10	Unmodified	_KKCQFPKKGT_					0	0	0			REV__ENSG00000197013|ENST00000358491|ZNF429	REV__ENSG00000197013|ENST00000358491|ZNF429	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.832763671875	2	582.831526	1163.6485	0.11318	6.5963E-05	1.8423	0.0010737	1.9554	0.0011397	582.8325626554922	94.252	3.4585	94.298	93.323	96.781	0.046173					208	81	3	0	0	0	0.8608	1	9842	9842		34.173	0.25091	1	743970	+		20945	23186	14156	14166	24188	24188					0.07322040279245812
KKCQFPKKGT	10	Unmodified	_KKCQFPKKGT_					0	0	0			REV__ENSG00000197013|ENST00000358491|ZNF429	REV__ENSG00000197013|ENST00000358491|ZNF429	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.8323974609375	2	582.831526	1163.6485	0.82789	0.00048252	1.2058	0.00070277	2.0337	0.0011853	582.8322150120989	94.225	3.555	94.386	93.365	96.92	0.16119					184	84	3	0	0	0	0.86218	1	9640	9640		32.812	4.9302	1	780120	+		20946	23186	14156	14166	24189	24189					0.07322040279245812
KKCYANIV	8	Unmodified	_KKCYANIV_					0	0	0			REV__ENST00000361193.7_2_17:78226975-78227197:+|nuORF	REV__ENST00000361193.7_2_17:78226975-78227197:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.7599792480469	2	469.760038	937.505523	0.22864	0.00010741	0.80597	0.00037861	1.0346	0.00048602	469.7603126237485	40.263	1.3568	40.345	40.004	41.361	0.081345					62	45	2	0	0	0	0.88915	1	2600	2600		35.201	0	1	459690	+		20947	25495	14157	14167	24190	24190					0.034270328879983936
KKDAAEQVRKS	11	Unmodified	_KKDAAEQVRKS_					0	0	0		nc|ENSG00000204842|Q99700-5|ATXN2;ENSG00000204842|ENST00000673436|ATXN2;nc|ENSG00000204842|Q99700-4|ATXN2;nc|ENSG00000204842|Q99700|ATXN2;nc|ENSG00000204842|Q99700-2|ATXN2	nc|ENSG00000204842|Q99700-5|ATXN2	nc|ENSG00000204842|Q99700-5|ATXN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.5759582519531	3	420.573726	1258.69935	0.054208	2.2798E-05	4.1241	0.0017345	4.1784	0.0017573	420.5753673707218	47.088	0.73682	47.074	46.65	47.387	-0.013817					48	19	3	0	0	0	0.72374	1	3803	3803		27.644	4.266	1	673640			20948	8489	14158	14168	24191	24191					0.08034660857788367
KKDDKGRDK	9	Unmodified	_KKDDKGRDK_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3063354492188	2	545.304187	1088.59382	1.622	0.00088447	1.7254	0.00094085	3.3473	0.0018253	545.3051122101872	24.517	1.7889	24.003	23.196	24.985	-0.51365					105	40	6	0	0	0	0.38563	1	1253	1253		58.782	0	1	6709400			20949	1442	14159	14169	24192	24192					0.05306744732183688
KKDFRAAL	8	Unmodified	_KKDFRAAL_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	474.7861328125	2	474.784902	947.55525	0.4921	0.00023364	-1.3828	-0.00065655	-0.89073	-0.00042291	474.7841747430564	26.75	0.38884	26.791	26.607	26.996	0.040834					17	11	2	0	0	0	0.87479	1	1178	1178		30.504	6.3009	1	28806			20950	2096	14160	14170	24193	24193					0.07937483888315455
KKDGRRLLRYL	11	Unmodified	_KKDGRRLLRYL_					0	0	0		ENSG00000188848|ENST00000502486|BEND4;nc|ENSG00000188848|Q6ZU67-4|BEND4;nc|ENSG00000188848|Q6ZU67-2|BEND4;nc|ENSG00000188848|Q6ZU67-5|BEND4;nc|ENSG00000188848|Q6ZU67-3|BEND4	ENSG00000188848|ENST00000502486|BEND4	ENSG00000188848|ENST00000502486|BEND4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	473.29913330078125	3	473.296527	1416.86775	0.77679	0.00036765	4.3776	0.0020719	5.1543	0.0024395	473.2984924404969	107.65	0.68206	107.74	107.3	107.98	0.091263					55	16	5	0	0	0	0.70584	2	11575	11562;11575		30.569	16.483	1	5833500			20951	7967	14161	14171	24194;24195	24195					0.17599187562109364
KKDGRRLLRYL	11	Unmodified	_KKDGRRLLRYL_					0	0	0		ENSG00000188848|ENST00000502486|BEND4;nc|ENSG00000188848|Q6ZU67-4|BEND4;nc|ENSG00000188848|Q6ZU67-2|BEND4;nc|ENSG00000188848|Q6ZU67-5|BEND4;nc|ENSG00000188848|Q6ZU67-3|BEND4	ENSG00000188848|ENST00000502486|BEND4	ENSG00000188848|ENST00000502486|BEND4	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	473.296527	1416.86775	-0.85784	-0.00040601	7.6075	0.0036006	6.7497	0.0031946	473.63443008602803	107.82	0.18402	107.82	107.65	107.83	0	0.11718	0.0030558	NaN	30.569	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1883300			20952	7967	14161	14171							0.17599187562109364
KKDGRRLLRYL	11	Unmodified	_KKDGRRLLRYL_					0	0	0		ENSG00000188848|ENST00000502486|BEND4;nc|ENSG00000188848|Q6ZU67-4|BEND4;nc|ENSG00000188848|Q6ZU67-2|BEND4;nc|ENSG00000188848|Q6ZU67-5|BEND4;nc|ENSG00000188848|Q6ZU67-3|BEND4	ENSG00000188848|ENST00000502486|BEND4	ENSG00000188848|ENST00000502486|BEND4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	473.296527	1416.86775	2.8046	0.0013274	2.3093	0.001093	5.1139	0.0024204	473.6321554709759	107.89	0.2834	107.86	107.6	107.88	-0.031487	0.16273	-0.004467	NaN	30.569	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3083700			20953	7967	14161	14171							0.17599187562109364
KKDGRRLLRYL	11	Unmodified	_KKDGRRLLRYL_					0	0	0		ENSG00000188848|ENST00000502486|BEND4;nc|ENSG00000188848|Q6ZU67-4|BEND4;nc|ENSG00000188848|Q6ZU67-2|BEND4;nc|ENSG00000188848|Q6ZU67-5|BEND4;nc|ENSG00000188848|Q6ZU67-3|BEND4	ENSG00000188848|ENST00000502486|BEND4	ENSG00000188848|ENST00000502486|BEND4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	473.296527	1416.86775	2.094	0.00099106	3.6725	0.0017382	5.7664	0.0027292	473.29825102651955	107.53	0.5579	107.64	107.27	107.83	0.10396	-0.061697	-0.0025316	NaN	30.569	35	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132640			20954	7967	14161	14171							0.17599187562109364
KKDGRRLLRYL	11	Unmodified	_KKDGRRLLRYL_					0	0	0		ENSG00000188848|ENST00000502486|BEND4;nc|ENSG00000188848|Q6ZU67-4|BEND4;nc|ENSG00000188848|Q6ZU67-2|BEND4;nc|ENSG00000188848|Q6ZU67-5|BEND4;nc|ENSG00000188848|Q6ZU67-3|BEND4	ENSG00000188848|ENST00000502486|BEND4	ENSG00000188848|ENST00000502486|BEND4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	473.296527	1416.86775	3.818	0.0018071	1.9872	0.00094055	5.8053	0.0027476	473.2971823700279	107.36	0.41148	107.48	107.29	107.7	0.11716	-0.21819	-0.0049244	NaN	30.569	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97068			20955	7967	14161	14171							0.17599187562109364
KKDIKSITSN	10	Unmodified	_KKDIKSITSN_					0	0	0		nc|ENSG00000196628|P15884-15|TCF4;nc|ENSG00000196628|P15884|TCF4;nc|ENSG00000196628|P15884-12|TCF4;nc|ENSG00000196628|P15884-14|TCF4;nc|ENSG00000196628|P15884-10|TCF4;nc|ENSG00000196628|P15884-5|TCF4;nc|ENSG00000196628|P15884-7|TCF4;nc|ENSG00000196628|P15884-9|TCF4;nc|ENSG00000196628|P15884-8|TCF4;chr18:55279656-55302416|43|41.16|0.62|6.06|-|ENST00000561831|TCF4,TCF4;nc|ENSG00000196628|P15884-6|TCF4;chr18:55279656-55403454|32|10.41|0.5|4.37|-|ENST00000626584|TCF4,TCF4;nc|ENSG00000196628|P15884-16|TCF4	nc|ENSG00000196628|P15884-15|TCF4	nc|ENSG00000196628|P15884-15|TCF4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.328857421875	2	567.32987	1132.64519	-0.468	-0.00026551	0.65202	0.00036991	0.18402	0.0001044	567.330130226139	95.712	2.0668	95.712	95.357	97.424	0					107	47	3	0	0	0	0.86348	1	9569	9569		31.53	1.0262	1	608220			20956	15186	14162	14172	24196	24196					0.08417068706239661
KKDIKSITSN	10	Unmodified	_KKDIKSITSN_					0	0	0		nc|ENSG00000196628|P15884-15|TCF4;nc|ENSG00000196628|P15884|TCF4;nc|ENSG00000196628|P15884-12|TCF4;nc|ENSG00000196628|P15884-14|TCF4;nc|ENSG00000196628|P15884-10|TCF4;nc|ENSG00000196628|P15884-5|TCF4;nc|ENSG00000196628|P15884-7|TCF4;nc|ENSG00000196628|P15884-9|TCF4;nc|ENSG00000196628|P15884-8|TCF4;chr18:55279656-55302416|43|41.16|0.62|6.06|-|ENST00000561831|TCF4,TCF4;nc|ENSG00000196628|P15884-6|TCF4;chr18:55279656-55403454|32|10.41|0.5|4.37|-|ENST00000626584|TCF4,TCF4;nc|ENSG00000196628|P15884-16|TCF4	nc|ENSG00000196628|P15884-15|TCF4	nc|ENSG00000196628|P15884-15|TCF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.329833984375	2	567.32987	1132.64519	1.8589	0.0010546	-2.0003	-0.0011348	-0.14134	-8.0184E-05	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86587	1	9814	9814		29.17	3.7199	1	15439000			20957	15186	14162	14172	24197	24197					0.08417068706239661
KKDIKSITSN	10	Unmodified	_KKDIKSITSN_					0	0	0		nc|ENSG00000196628|P15884-15|TCF4;nc|ENSG00000196628|P15884|TCF4;nc|ENSG00000196628|P15884-12|TCF4;nc|ENSG00000196628|P15884-14|TCF4;nc|ENSG00000196628|P15884-10|TCF4;nc|ENSG00000196628|P15884-5|TCF4;nc|ENSG00000196628|P15884-7|TCF4;nc|ENSG00000196628|P15884-9|TCF4;nc|ENSG00000196628|P15884-8|TCF4;chr18:55279656-55302416|43|41.16|0.62|6.06|-|ENST00000561831|TCF4,TCF4;nc|ENSG00000196628|P15884-6|TCF4;chr18:55279656-55403454|32|10.41|0.5|4.37|-|ENST00000626584|TCF4,TCF4;nc|ENSG00000196628|P15884-16|TCF4	nc|ENSG00000196628|P15884-15|TCF4	nc|ENSG00000196628|P15884-15|TCF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3298950195312	2	567.32987	1132.64519	-1.3957	-0.00079181	1.2535	0.00071113	-0.14221	-8.0679E-05	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.8545	1	9321	9321		36.447	2.2742	1	17338000			20958	15186	14162	14172	24198	24198					0.08417068706239661
KKDKERKK	8	Unmodified	_KKDKERKK_					0	0	0			REV__ENST00000531243.2_1_1:40041622-40042411:-|nuORF	REV__ENST00000531243.2_1_1:40041622-40042411:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.329833984375	2	530.33529	1058.65603	-0.55814	-0.000296	2.5143	0.0013334	1.9561	0.0010374	530.3366846939666	109.37	0.24849	109.37	109.28	109.52	0					20	12	2	0	0	0	0.4196	1	11369	11369		21.96	11.695	1	1206300	+		20959	28297	14163	14173	24199	24199					0.12904515871173317
KKDKSIAAMLL	11	Unmodified	_KKDKSIAAMLL_					0	0	0			REV__nc|ENSG00000166938|Q8TF46-2|DIS3L	REV__nc|ENSG00000166938|Q8TF46-2|DIS3L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.58380126953125	3	406.581053	1216.72133	3.1308	0.0012729	4.2821	0.001741	7.4129	0.0030139	406.5827071519945	112.24	0.82966	112.27	112.06	112.89	0.030602					58	32	2	0	0	0	0.76251	1	13580	13580		19.263	3.2559	1	1459000	+		20960	21341	14164	14174	24200	24200					0.12163749282012759
KKDLSGNTPLI	11	Unmodified	_KKDLSGNTPLI_					0	0	0		ENSG00000105186|ENST00000306065|ANKRD27	ENSG00000105186|ENST00000306065|ANKRD27	ENSG00000105186|ENST00000306065|ANKRD27	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3453369140625	2	593.34552	1184.67649	-1.311	-0.00077786	-0.43407	-0.00025755	-1.745	-0.0010354	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.73893	1	10897	10897		24.519	1.9395	1	3957400			20961	2190	14165	14175	24201	24201					0.09153641740317653
KKDSDYVV	8	Unmodified	_KKDSDYVV_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A;nc|ENSG00000091536|Q9UKN7-2|MYO15A;ENST00000536811.5_1_17:18058633-18060585:+|nuORF	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.251220703125	2	477.250557	952.486562	1.1624	0.00055478	-1.3741	-0.00065579	-0.21167	-0.00010102	477.24981301864784	22.679	0.59389	22.26	22.016	22.61	-0.41879					33	13	3	0	0	0	0.93786	1	958	958		53.351	3.3269	1	220000			20962	1679	14166	14176	24202	24202					0.008417747979478918
KKDTKKKF	8	Unmodified	_KKDTKKKF_					0	0	0			REV__ENST00000541682.6_1_17:8024336-8024711:-|nuORF	REV__ENST00000541682.6_1_17:8024336-8024711:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.82037353515625	2	511.821484	1021.62842	-0.12593	-6.4454E-05	-1.4771	-0.00075603	-1.6031	-0.00082048	511.8205326826124	82.197	0.9657	82.623	82.159	83.124	0.42646					55	23	3	0	0	0	0.884	1	9502	9502		33.516	7.9415	1	1502000	+		20963	28487	14167	14177	24203	24203					0.11846612610941065
KKEAKLIKV	9	Unmodified	_KKEAKLIKV_					0	0	0			REV__L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|74|2|sense	REV__L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|74|2|sense	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.8545532226562	2	528.860609	1055.70667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.02	1	116.94	116.44	117.44	-0.07531								0	0	0	0.36247	1	12558	12558		10.866	0	1		+		20964	29499	14168	14178	24204	24204					0.1810404519619624
KKEEEKSIRIF	11	Unmodified	_KKEEEKSIRIF_					0	0	0			REV__ENST00000500113.1_1_11:77853274-77853451:+|nuORF	REV__ENST00000500113.1_1_11:77853274-77853451:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.93829345703125	3	469.604915	1405.79291	-1.0886	-0.0005112	2.1467	0.0010081	1.0581	0.00049689	469.60579012279544	24.348	0.75488	24.406	24.014	24.769	0.058167					57	34	2	0	0	0	0.70847	1	843	843		30.139	7.5776	1	67749	+		20965	27804	14169	14179	24205	24205					0.10624960240215842
KKEEEKSIRIF	11	Unmodified	_KKEEEKSIRIF_					0	0	0			REV__ENST00000500113.1_1_11:77853274-77853451:+|nuORF	REV__ENST00000500113.1_1_11:77853274-77853451:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	469.604915	1405.79291	0.080428	3.7769E-05	0.65542	0.00030779	0.73585	0.00034556	469.60524880790894	23.913	0.73206	24.008	23.707	24.439	0.094501	-0.18523	-0.00026324	NaN	30.139	62	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121430	+		20966	27804	14169	14179							0.10624960240215842
KKEERLKP	8	Unmodified	_KKEERLKP_					0	0	0		nc|ENSG00000110713|P52948-2|NUP98;ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-6|NUP98	nc|ENSG00000110713|P52948-2|NUP98	nc|ENSG00000110713|P52948-2|NUP98	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.2196655273438	2	514.316566	1026.61858	0.55907	0.00028754	-1.5225	-0.00078303	-0.96339	-0.00049549	514.3154135628251	29.971	0.5601	29.882	29.619	30.179	-0.089544					18	12	2	0	0	0	0.4196	1	1978	1978		15.642	0	1	118340			20967	2536	14170	14180	24206	24206					0.10633424605566688
KKEESTGEDDK	11	Unmodified	_KKEESTGEDDK_					0	0	0			REV__ENSG00000162434|ENST00000342505|JAK1	REV__ENSG00000162434|ENST00000342505|JAK1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.2973022460938	2	633.296421	1264.57829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.228	1	65.354	64.854	65.854	0.12532								0	0	0	0.56276	1	5791	5791		32.751	2.4328	1		+		20968	20815	14171	14181	24207	24207					-0.04341631366173715
KKELQQNHKL	10	Unmodified	_KKELQQNHKL_					0	0	0			REV__ENSG00000187672|ENST00000288221|ERC2	REV__ENSG00000187672|ENST00000288221|ERC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5816345214844	3	422.582333	1264.72517	-1.733	-0.00073233	0.89401	0.00037779	-0.83897	-0.00035453	422.5826240153895	97.352	3.8291	97.583	96.825	100.65	0.23103					216	89	4	0	0	0	0.85251	1	10063	10063		19.263	0	1	506650	+		20969	15811	14172	14182	24208	24208					0.10339555100085818
KKEPKEKERVK	11	Unmodified	_KKEPKEKERVK_					0	0	0			REV__ENSG00000186439|ENST00000334268|TRDN	REV__ENSG00000186439|ENST00000334268|TRDN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.9765625	3	466.952426	1397.83545	0.36704	0.00017139	0.10741	5.0154E-05	0.47444	0.00022154	466.9529008212443	56.05	0.10428	56.149	56.061	56.165	0.09919					6	3	2	0	0	0	0.17758	1	4714	4714		14.779	6.3715	1	27956	+		20970	22852	14173	14183	24209	24209					0.15244355368440665
KKEQKYWLLSR	11	Unmodified	_KKEQKYWLLSR_					0	0	0			REV__nc|ENSG00000211815|A0A075B6V5|TRAV36DV7	REV__nc|ENSG00000211815|A0A075B6V5|TRAV36DV7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.6210021972656	3	493.620788	1477.84053	0.40491	0.00019987	0.20054	9.8993E-05	0.60545	0.00029886	493.62080407624626	30.653	0.85216	30.651	30.205	31.057	-0.0022526					107	42	3	0	0	0	0.79476	1	1360	1360		12.433	0	1	258510	+		20971	30191	14174	14184	24210	24210					0.12072659231080252
KKERARSP	8	Unmodified	_KKERARSP_					0	0	0		nc|ENSG00000140265|Q8IWY8-2|ZSCAN29;ENSG00000140265|ENST00000684362|ZSCAN29;nc|ENSG00000140265|Q8IWY8-4|ZSCAN29;nc|ENSG00000140265|Q8IWY8-3|ZSCAN29	nc|ENSG00000140265|Q8IWY8-2|ZSCAN29	nc|ENSG00000140265|Q8IWY8-2|ZSCAN29	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.3148193359375	2	486.290882	970.567212	0.47771	0.00023231	-3.5599	-0.0017311	-3.0822	-0.0014988	486.2890085983685	29.33	0.60391	29.24	28.715	29.319	-0.089544					19	13	2	0	0	0	0.4196	1	1845	1845		63.306	15.391	1	423160			20972	4419	14175	14185	24211	24211					0.08075100631515397
KKERFVQQ	8	Unmodified	_KKERFVQQ_					0	0	0			REV__ENSG00000135999|ENST00000258484|EPC2	REV__ENSG00000135999|ENST00000258484|EPC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.80712890625	2	531.806365	1061.59818	0.79171	0.00042104	-0.96667	-0.00051408	-0.17496	-9.3044E-05	531.8057678754459	25.234	0.65381	24.905	24.658	25.312	-0.32825					23	14	2	0	0	0	0.5397	1	1274	1274		73.975	5.49	1	459040	+		20973	19278	14176	14186	24212	24212					0.06984253945756791
KKERHNTILI	10	Unmodified	_KKERHNTILI_					0	0	0			REV__ENST00000375204.2_1_9:100053158-100058044:+|nuORF;REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF	REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.9225769042969	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.86047	1	11573	11573		22.562	0.87584	1	19495000	+		20974	25808;25809	14177	14187	24213	24213					0.13056145479754377
KKERHNTILI	10	Unmodified	_KKERHNTILI_					0	0	0			REV__ENST00000375204.2_1_9:100053158-100058044:+|nuORF;REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF	REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3796997070312	2	626.380229	1250.7459	2.9096	0.0018225	-3.8515	-0.0024125	-0.94186	-0.00058996	626.377711482176	105.86	2.6957	105.82	104.89	107.59	-0.03714					304	63	6	0	0	0	0.86195	1	11880	11880		35.152	1.2304	1	48616000	+		20975	25808;25809	14177	14187	24214	24214					0.13056145479754377
KKERHNTILI	10	Unmodified	_KKERHNTILI_					0	0	0			REV__ENST00000375204.2_1_9:100053158-100058044:+|nuORF;REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF	REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.9223937988281	3	417.922578	1250.7459	0.73411	0.0003068	-1.4619	-0.00061096	-0.7278	-0.00030416	417.9219647760214	105.64	2.8346	105.75	104.94	107.78	0.10766					247	69	5	0	0	0	0.85466	1	11266	11266		26.063	11.82	1	29053000	+		20976	25808;25809	14177	14187	24215	24215					0.13056145479754377
KKERHNTILI	10	Unmodified	_KKERHNTILI_					0	0	0			REV__ENST00000375204.2_1_9:100053158-100058044:+|nuORF;REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF	REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92230224609375	3	417.922578	1250.7459	-1.8945	-0.00079175	1.1534	0.00048205	-0.74105	-0.0003097	417.92301973502657	105.61	2.7753	105.68	104.89	107.66	0.073112					226	67	4	0	0	0	0.85466	2	11129	11129;11165		21.686	0	1	18308000	+		20977	25808;25809	14177	14187	24216;24217	24216					0.13056145479754377
KKESLSPGKLK	11	Unmodified	_KKESLSPGKLK_					0	0	0		nc|ENSG00000162614|Q0ZGT2-4|NEXN;nc|ENSG00000162614|Q0ZGT2-2|NEXN;ENSG00000162614|ENST00000334785|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5872497558594	3	405.587084	1213.73942	0.15083	6.1173E-05	-0.32802	-0.00013304	-0.17719	-7.1866E-05	405.58673585800364	30.902	0.70552	30.982	30.722	31.428	0.079834					44	15	4	0	0	0	0.56641	1	2054	2054		47.228	1.3196	1	700120			20978	5705	14178	14188	24218	24218					0.14110207528369756
KKESTLPPR	9	Unmodified	_KKESTLPPR_					0	0	0		nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;ENSG00000117523|ENST00000647382|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3132934570312	2	528.314023	1054.61349	-1.5228	-0.00080452	1.9442	0.0010272	0.42141	0.00022264	528.3151474868954	98.282	1.1905	98.478	97.935	99.126	0.19585					48	26	2	0	0	0	0.76255	1	10163	10163		35.618	4.0885	1	327210			20979	2984	14179	14189	24219	24219					0.08837120742941806
KKEVKSKAAS	10	Unmodified	_KKEVKSKAAS_					0	0	0			REV__ENST00000414863.2_1_X:97506861-97507095:+|nuORF	REV__ENST00000414863.2_1_X:97506861-97507095:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.327880859375	2	538.327131	1074.63971	-0.54037	-0.0002909	0.19001	0.00010229	-0.35037	-0.00018861	538.3271646052639	101.22	3.8034	101.22	100.55	104.36	0					314	93	6	0	0	0	0.78666	1	10547	10547		40.058	4.4399	1	48186000	+		20980	16954	14180	14190	24220	24220					0.10537389914406958
KKEVKSKAAS	10	Unmodified	_KKEVKSKAAS_					0	0	0			REV__ENST00000414863.2_1_X:97506861-97507095:+|nuORF	REV__ENST00000414863.2_1_X:97506861-97507095:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3264770507812	2	538.327131	1074.63971	-0.15457	-8.3211E-05	0.45031	0.00024241	0.29574	0.0001592	538.3272743681667	105.93	1.9444	105.91	105.06	107	-0.025146					87	45	3	0	0	0	0.85834	1	11520	11520		22.58	0.89391	1	893020	+		20981	16954	14180	14190	24221	24221					0.10537389914406958
KKEVKSKAAS	10	Unmodified	_KKEVKSKAAS_					0	0	0			REV__ENST00000414863.2_1_X:97506861-97507095:+|nuORF	REV__ENST00000414863.2_1_X:97506861-97507095:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3267822265625	2	538.327131	1074.63971	0.070633	3.8024E-05	-0.68681	-0.00036973	-0.61617	-0.0003317	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.85981	1	10795	10795		35.152	4.6484	1	109840000	+		20982	16954	14180	14190	24222	24222					0.10537389914406958
KKEVKSKAAS	10	Unmodified	_KKEVKSKAAS_					0	0	0			REV__ENST00000414863.2_1_X:97506861-97507095:+|nuORF	REV__ENST00000414863.2_1_X:97506861-97507095:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3267211914062	2	538.327131	1074.63971	0.84014	0.00045227	-1.3812	-0.00074354	-0.54107	-0.00029127	538.326371026974	100.85	3.8483	100.99	100.33	104.18	0.14352					341	94	6	0	0	0	0.85981	1	10702	10702		35.152	3.1972	1	92159000	+		20983	16954	14180	14190	24223	24223					0.10537389914406958
KKEVKSKAAS	10	Unmodified	_KKEVKSKAAS_					0	0	0			REV__ENST00000414863.2_1_X:97506861-97507095:+|nuORF	REV__ENST00000414863.2_1_X:97506861-97507095:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3273315429688	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.84816	1	12322	12322		17.468	0.10304	1	4041000	+		20984	16954	14180	14190	24224	24224					0.10537389914406958
KKEVPKRILDQ	11	Unmodified	_KKEVPKRILDQ_					0	0	0		nc|ENSG00000204138|Q8IZ21-3|PHACTR4;ENSG00000204138|ENST00000373839|PHACTR4;nc|ENSG00000204138|Q8IZ21-2|PHACTR4;ENST00000493669.2_1_1:28733953-28817463:+|nuORF	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9427185058594	3	451.945271	1352.81398	-0.066969	-3.0266E-05	-4.4831	-0.0020261	-4.5501	-0.0020564	451.9431207678107	53.546	2.822	53.541	51.391	54.213	-0.0053711					204	73	4	0	0	0	0.76942	1	4566	4566		17.722	0.55478	1	724120			20985	8418	14181	14191	24225	24225					0.15168970339755106
KKFHIQQTVSK	11	Unmodified	_KKFHIQQTVSK_					0	0	0			REV__ENSG00000182318|ENST00000329665|ZSCAN22	REV__ENSG00000182318|ENST00000329665|ZSCAN22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.59674072265625	3	448.597983	1342.77212	-0.41513	-0.00018623	-2.9083	-0.0013047	-3.3234	-0.0014909	448.59664919674736	33.024	0.93202	33.194	32.721	33.653	0.16971					61	21	4	0	0	0	0.32097	4	2354	2333;2343;2354;2366		70.399	14.883	1	1878800	+		20986	22516	14182	14192	24226;24227;24228;24229	24228					0.11444414651214174
KKFHIQQTVSK	11	Unmodified	_KKFHIQQTVSK_					0	0	0			REV__ENSG00000182318|ENST00000329665|ZSCAN22	REV__ENSG00000182318|ENST00000329665|ZSCAN22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.59625244140625	3	448.597983	1342.77212	1.0026	0.00044974	-4.2433	-0.0019035	-3.2407	-0.0014538	448.5960230906909	33.014	0.92749	33.225	32.851	33.778	0.21168					63	21	4	0	0	0	0.47591	1	2353	2353		53.597	4.131	1	1860300	+		20987	22516	14182	14192	24230	24230					0.11444414651214174
KKFHIQQTVSK	11	Unmodified	_KKFHIQQTVSK_					0	0	0			REV__ENSG00000182318|ENST00000329665|ZSCAN22	REV__ENSG00000182318|ENST00000329665|ZSCAN22	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	448.597983	1342.77212	-0.41513	-0.00018623	-2.9083	-0.0013047	-3.3234	-0.0014909	448.59664919674736	33.024	0.93202	33.194	32.721	33.653	0.16971	-0.015552	0.0005985	NaN	70.399	61	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1878800	+		20988	22516	14182	14192							0.11444414651214174
KKFIKKIL	8	Unmodified	_KKFIKKIL_					0	0	0			REV__L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|67|3|sense	REV__L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|67|3|sense	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.5965270996094	2	509.362788	1016.71102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.59	1	115.57	115.07	116.07	-0.02433								0	0	0	0.31173	1	12801	12801		8.8223	0	1		+		20989	29472	14183	14193	24231	24231					0.20333554409762655
KKFKFFKF	8	Unmodified	_KKFKFFKF_					0	0	0		ENSG00000095370|ENST00000314830|SH2D3C	ENSG00000095370|ENST00000314830|SH2D3C	ENSG00000095370|ENST00000314830|SH2D3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3425903320312	2	560.339313	1118.66407	3.1454	0.0017625	-1.3158	-0.00073729	1.8296	0.0010252	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.86288	1	12983	12983		26.796	3.2734	1	151040			20990	1723	14184	14194	24232	24232					0.10948694858598174
KKFKSKGTLKS	11	Unmodified	_KKFKSKGTLKS_					0	0	0		nc|ENSG00000066827|Q9P243-4|ZFAT;nc|ENSG00000066827|Q9P243-2|ZFAT;ENSG00000066827|ENST00000377838|ZFAT;chr8:134565152-134565333|13|11.31|0.51|4.48|-|ENST00000523243|ZFAT,ZFAT	nc|ENSG00000066827|Q9P243-4|ZFAT	nc|ENSG00000066827|Q9P243-4|ZFAT	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.395263671875	2	626.392805	1250.77106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.2	1	108.17	107.67	108.67	-0.031487								0	0	0	0.56276	1	12003	12003		24.519	4.5224	1				20991	1168	14185	14195	24233	24233					0.15570200282331825
KKFKSKGTLKS	11	Unmodified	_KKFKSKGTLKS_					0	0	0		nc|ENSG00000066827|Q9P243-4|ZFAT;nc|ENSG00000066827|Q9P243-2|ZFAT;ENSG00000066827|ENST00000377838|ZFAT;chr8:134565152-134565333|13|11.31|0.51|4.48|-|ENST00000523243|ZFAT,ZFAT	nc|ENSG00000066827|Q9P243-4|ZFAT	nc|ENSG00000066827|Q9P243-4|ZFAT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3917846679688	2	626.392805	1250.77106	6.5284	0.0040894	-0.081087	-5.0792E-05	6.4474	0.0040386	626.3926332605848	110.43	0.80482	110.5	110.23	111.04	0.068001					53	30	2	0	0	0	0.75921	1	13437	13437		19.997	0.89325	1	332460			20992	1168	14185	14195	24234	24234					0.15570200282331825
KKFNNLRSW	9	Unmodified	_KKFNNLRSW_					0	0	0			REV__CDC45-SLC5A4-AS1|1|chr22_19484005_+,chr22_32268288_+|4.0|8.0|0.1109|2|2|fusion	REV__CDC45-SLC5A4-AS1|1|chr22_19484005_+,chr22_32268288_+|4.0|8.0|0.1109|2|2|fusion	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3564453125	2	596.832914	1191.65128	-0.33912	-0.0002024	2.5122	0.0014993	2.173	0.0012969	596.8344974547965	93.787	0.71441	94.223	93.636	94.35	0.43539					25	16	2	0	0	0	0.20789	1	11143	11143		29.15	0	1	168590	+		20993	15402	14186	14196	24235	24235					0.06311631728431166
KKFQPMNKI	9	Unmodified	_KKFQPMNKI_					0	0	0		ENST00000573805.1_1_17:4863752-4871075:-|nuORF;ENST00000572148.1_1_17:4863453-4863890:-|nuORF;ENSG00000091640|ENST00000206020|SPAG7	ENST00000573805.1_1_17:4863752-4871075:-|nuORF	ENST00000573805.1_1_17:4863752-4871075:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.33056640625	2	567.328619	1132.64269	0.79571	0.00045143	1.1706	0.0006641	1.9663	0.0011155	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.7932	1	9213	9213		17.365	0.89182	1	18145000			20994	1680	14187	14197	24236	24236					0.08166941767581193
KKFVHIGK	8	Unmodified	_KKFVHIGK_					0	0	0			REV__ENSG00000017797|ENST00000383432|RALBP1	REV__ENSG00000017797|ENST00000383432|RALBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.80572509765625	2	478.805637	955.596721	-0.92452	-0.00044266	2.2693	0.0010865	1.3448	0.00064388	478.80664804898805	39.433	1.9403	39.444	38.3	40.24	0.010708					89	52	2	0	0	0	0.79929	1	2444	2444		18.324	3.6603	1	287670	+		20995	16221	14188	14198	24237	24237					0.11714664647661266
KKFVRSNMFKL	11	Unmodified	_KKFVRSNMFKL_					0	0	0			REV__nc|ENSG00000107242|O14986-2|PIP5K1B	REV__nc|ENSG00000107242|O14986-2|PIP5K1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.6075744628906	3	466.607713	1396.80131	-0.93039	-0.00043413	1.4041	0.00065517	0.47372	0.00022104	466.6082212965859	101	2.1787	101	99.472	101.65	0					144	51	4	0	0	0	0.77511	1	10138	10138		16.53	0	1	331070	+		20996	29766	14189	14199	24238	24238					0.11878235675862925
KKFYKPHI	8	Unmodified	_KKFYKPHI_					0	0	0			REV__nc|ENSG00000187726|P59910-2|DNAJB13	REV__nc|ENSG00000187726|P59910-2|DNAJB13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.8208618164062	2	530.818744	1059.62294	0.78062	0.00041437	3.3736	0.0017908	4.1542	0.0022051	530.820404965767	82.475	1.248	82.534	82.031	83.279	0.059166					76	28	4	0	0	0	0.86288	1	8218	8218		26.796	4.8362	1	1356800	+		20997	22938	14190	14200	24239	24239					0.09550933819127749
KKGAPQKD	8	Unmodified	_KKGAPQKD_					0	0	0		ENSG00000139780|ENST00000267273|METTL21C	ENSG00000139780|ENST00000267273|METTL21C	ENSG00000139780|ENST00000267273|METTL21C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.2525939941406	2	436.253434	870.492316	0.7369	0.00032147	2.7196	0.0011864	3.4565	0.0015079	436.25447647415183	112.2	0.2012	112.26	112.11	112.31	0.066025					9	6	2	0	0	0	0.89494	1	12083	12083		37.159	2.9866	1	82791			20998	4397	14191	14201	24240	24240					0.051889181002820806
KKGEKIKQ	8	Unmodified	_KKGEKIKQ_					0	0	0			REV__ENST00000334062.7_1_13:114747722-114747797:-|nuORF	REV__ENST00000334062.7_1_13:114747722-114747797:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.8055114746094	2	479.805834	957.597115	1.0605	0.00050883	-1.2306	-0.00059043	-0.17006	-8.1595E-05	479.80512582229665	16.376	0.27293	15.889	15.779	16.052	-0.48718					9	5	3	0	0	0	0.66521	1	121	121		68.787	7.8149	1	129230	+		20999	25151	14192	14202	24241	24241					0.1166203957683365
KKGGRGLL	8	Unmodified	_KKGGRGLL_					0	0	0			REV__L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|16|1|sense	REV__L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|16|1|sense	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	414.7618408203125	2	414.774337	827.534121	-1.1755	-0.00048758	2.9503	0.0012237	1.7748	0.00073613	414.77559110073315	88.487	0.12706	88.487	88.38	88.507	0					4	2	2	0	0	0	0.4196	1	8509	8509		4.3163	0	1	38326	+		21000	29544	14193	14203	24242	24242					0.1134551857948054
KKGIKFFQ	8	Unmodified	_KKGIKFFQ_					0	0	0		nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2	nc|ENSG00000119787|Q8NHH9-4|ATL2	nc|ENSG00000119787|Q8NHH9-4|ATL2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.3059997558594	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.676	1	52.652	52.152	53.152	-0.023849								0	0	0	0.30252	1	4669	4669		19.36	0	1				21001	14872	14194	14204	24243	24243					0.0988724492780193
KKGKASHN	8	Unmodified	_KKGKASHN_					0	0	0			REV__ENSG00000172188|ENST00000641580|OR4C11	REV__ENSG00000172188|ENST00000641580|OR4C11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25146484375	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.8347	1	7585	7585		23.042	1.0826	1	2823900	+		21002	21809	14195	14205	24244	24244					0.048394536773685104
KKGKASHN	8	Unmodified	_KKGKASHN_					0	0	0			REV__ENSG00000172188|ENST00000641580|OR4C11	REV__ENSG00000172188|ENST00000641580|OR4C11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7542724609375	2	435.251226	868.487899	0.060967	2.6536E-05	2.665	0.0011599	2.7259	0.0011865	435.2512504176026	77.105	2.0148	77.505	76.162	78.177	0.3997					95	54	4	0	0	0	0.8537	1	8778	8778		25.574	0.12388	1	572660	+		21003	21809	14195	14205	24245	24245					0.048394536773685104
KKGKASHN	8	Unmodified	_KKGKASHN_					0	0	0			REV__ENSG00000172188|ENST00000641580|OR4C11	REV__ENSG00000172188|ENST00000641580|OR4C11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2519836425781	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.89494	1	9098	9098		37.159	1.5408	1	2020200	+		21004	21809	14195	14205	24246	24246					0.048394536773685104
KKGKKGVEAS	10	Unmodified	_KKGKKGVEAS_					0	0	0			REV__ENSG00000132275|ENST00000254605|RRP8	REV__ENSG00000132275|ENST00000254605|RRP8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3135986328125	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.8651	1	12676	12676		25.574	4.6271	1	4038100	+		21005	18989	14196	14206	24247	24247					0.09941120742928433
KKGKVLIKRR	10	Unmodified	_KKGKVLIKRR_					0	0	0			REV__ENST00000483685.5_1_2:219487553-219498591:+|nuORF	REV__ENST00000483685.5_1_2:219487553-219498591:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	409.29241943359375	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.582	1	71.616	71.116	72.116	0.034004								0	0	0	0.45132	1	6787	6787		7.8045	2.1057	1		+		21006	18129	14197	14207	24248	24248					0.2472131174695278
KKGKVLIKRR	10	Unmodified	_KKGKVLIKRR_					0	0	0			REV__ENST00000483685.5_1_2:219487553-219498591:+|nuORF	REV__ENST00000483685.5_1_2:219487553-219498591:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2925720214844	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.509	1	18.879	18.379	19.379	-0.6296								0	0	0	0.45132	1	530	530		7.3997	0.38104	1		+		21007	18129	14197	14207	24249	24249					0.2472131174695278
KKGLFALADN	10	Unmodified	_KKGLFALADN_					0	0	0			REV__nc|ENSG00000138639|Q8N264-5|ARHGAP24	REV__nc|ENSG00000138639|Q8N264-5|ARHGAP24	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.8067626953125	2	538.808574	1075.60259	-0.69163	-0.00037266	-2.7906	-0.0015036	-3.4823	-0.0018763	538.8070299475025	90.865	3.8094	90.865	89.559	93.368	0					216	88	3	0	0	0	0.86471	1	8848	8848		30.318	3.2704	1	563820	+		21008	29885	14198	14208	24250	24250					0.06781718368642942
KKGLHRNRS	9	Unmodified	_KKGLHRNRS_					0	0	0			REV__ENSG00000101544|ENST00000262198|ADNP2	REV__ENSG00000101544|ENST00000262198|ADNP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.3297729492188	2	548.328331	1094.64211	1.0295	0.00056451	1.2942	0.00070966	2.3237	0.0012742	548.3288715539239	27.829	1.1657	27.575	27.152	28.318	-0.25465					90	27	5	0	0	0	0.22631	1	1696	1696		71.296	9.1883	1	1628800	+		21009	17288	14199	14209	24251	24251					0.09857283162750718
KKGLLATSG	9	Unmodified	_KKGLLATSG_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7711486816406	2	437.77146	873.528367	-1.5883	-0.00069529	1.3765	0.00060259	-0.21176	-9.2702E-05	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.7932	1	2304	2304		20.947	0.95016	1	1227500			21010	2096	14200	14210	24252	24252					0.0865437527713766
KKGLLATSG	9	Unmodified	_KKGLLATSG_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7706604003906	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.7932	1	2315	2315		20.947	1.8434	1	1041500			21011	2096	14200	14210	24253	24253					0.0865437527713766
KKGLPTKAYWN	11	Unmodified	_KKGLPTKAYWN_					0	0	0			REV__ENST00000479783.1_1_2:237233333-237240271:-|nuORF	REV__ENST00000479783.1_1_2:237233333-237240271:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.2490539550781	3	435.915312	1304.72411	1.026	0.00044724	-3.9232	-0.0017102	-2.8972	-0.0012629	435.9135040455985	33.079	0.87504	33.078	32.826	33.701	-0.0016365					45	20	3	0	0	0	0.70584	1	1920	1920		30.569	2.9249	1	121590	+		21012	18992	14201	14211	24254	24254					0.08393340731186072
KKGLRLKPS	9	Unmodified	_KKGLRLKPS_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.84228515625	2	513.842751	1025.67095	-0.043039	-2.2115E-05	0.34285	0.00017617	0.29981	0.00015405	513.8427281190492	21.509	0.50888	21.444	21.265	21.774	-0.064743					30	16	3	0	0	0	0.77546	1	624	624		31.955	5.1588	1	68803	+		21013	22085	14202	14212	24255	24255					0.15914007739161207
KKGLSLLVC	9	Unmodified	_KKGLSLLVC_					0	0	0			REV__ENSG00000108878|ENST00000226021|CACNG1	REV__ENSG00000108878|ENST00000226021|CACNG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.8009338378906	2	480.799163	959.583773	2.0445	0.00098299	1.3323	0.00064055	3.3768	0.0016235	480.7997098356697	95.287	4.3541	95.23	94.639	98.993	-0.057526					326	101	5	0	0	0	0.78058	1	10326	10326		30.504	0	1	19210000	+		21014	17738	14203	14213	24256	24256					0.10236465473246881
KKGLSLLVC	9	Unmodified	_KKGLSLLVC_					0	0	0			REV__ENSG00000108878|ENST00000226021|CACNG1	REV__ENSG00000108878|ENST00000226021|CACNG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8008728027344	2	480.799163	959.583773	0.73477	0.00035328	2.7032	0.0012997	3.438	0.001653	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.78536	1	10163	10163		29.15	6.1071	1	18148000	+		21015	17738	14203	14213	24257	24257					0.10236465473246881
KKGPLRDN	8	Unmodified	_KKGPLRDN_					0	0	0			REV__ENSG00000083642|ENST00000315596|PDS5B	REV__ENSG00000083642|ENST00000315596|PDS5B	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25341796875	2	464.272158	926.529764	-1.1582	-0.0005377	1.6324	0.00075786	0.4742	0.00022016	464.27278535261274	85.735	1.1582	85.735	85.359	86.517	0					42	26	2	0	0	0	0.4196	1	8088	8088		25.574	0	1	77308	+		21016	16858	14204	14214	24258	24258					0.06356009365890714
KKGPLRDN	8	Unmodified	_KKGPLRDN_					0	0	0			REV__ENSG00000083642|ENST00000315596|PDS5B	REV__ENSG00000083642|ENST00000315596|PDS5B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2548828125	2	464.272158	926.529764	-1.0547	-0.00048965	1.2514	0.00058099	0.19672	9.1333E-05	464.27253300418266	85.668	1.3953	85.853	85.275	86.67	0.18523					49	32	2	0	0	0	0.4196	1	8341	8341		10.866	0	1	90159	+		21017	16858	14204	14214	24259	24259					0.06356009365890714
KKGPVCIK	8	Unmodified	_KKGPVCIK_					0	0	0			REV__nc|ENSG00000075292|Q14966-3|ZNF638	REV__nc|ENSG00000075292|Q14966-3|ZNF638	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.7742004394531	2	436.772948	871.531344	-1.6288	-0.0007114	3.5009	0.0015291	1.8721	0.0008177	436.7743504876495	26.927	0.91903	26.994	26.723	27.642	0.066877					84	43	3	0	0	0	0.82419	1	1039	1039		13.775	0	1	198510	+		21018	16707	14205	14215	24260	24260					0.09043927130278462
KKGRKLRPI	9	Unmodified	_KKGRKLRPI_					0	0	0		chr4:184716629-184717136|13|13.69|0.1|7.07|-|2|None,CENPU|2	chr4:184716629-184717136|13|13.69|0.1|7.07|-|2|None,CENPU|2	chr4:184716629-184717136|13|13.69|0.1|7.07|-|2|None,CENPU|2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3737182617188	2	548.377292	1094.74003	-1.4257	-0.00078185	-3.9799	-0.0021825	-5.4057	-0.0029643	548.3749403834641	37.356	2.5025	37.356	35.98	38.483	0					111	59	3	0	0	0	0.7932	1	2141	2141		12.207	3.9756	1	203100			21019	418	14206	14216	24261	24261					0.19645091758729905
KKGSEKRAP	9	Unmodified	_KKGSEKRAP_					0	0	0			REV__ENSG00000145416|ENST00000514618|MARCHF1	REV__ENSG00000145416|ENST00000514618|MARCHF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.8003845214844	2	500.79854	999.582528	-1.2528	-0.00062739	1.0431	0.0005224	-0.20965	-0.00010499	500.7988659235396	28.562	0.49404	28.465	28.261	28.755	-0.096945					16	11	2	0	0	0	0.73802	1	1740	1740		37.812	5.8567	1	115680	+		21020	19944	14207	14217	24262	24262					0.08271967428697735
KKGSEKRAP	9	Unmodified	_KKGSEKRAP_					0	0	0			REV__ENSG00000145416|ENST00000514618|MARCHF1	REV__ENSG00000145416|ENST00000514618|MARCHF1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	500.79854	999.582528	0.15262	7.643E-05	3.1758	0.0015904	3.3284	0.0016668	501.302217507376	28.566	0.16493	28.679	28.591	28.756	0.11225	0.10316	0.0026644	NaN	37.812	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24809	+		21021	19944	14207	14217							0.08271967428697735
KKGSEKRAP	9	Unmodified	_KKGSEKRAP_					0	0	0			REV__ENSG00000145416|ENST00000514618|MARCHF1	REV__ENSG00000145416|ENST00000514618|MARCHF1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	500.79854	999.582528	-1.2528	-0.00062739	1.0431	0.0005224	-0.20965	-0.00010499	500.7988659235396	28.562	0.49404	28.465	28.261	28.755	-0.096945	-0.11004	0.00052839	NaN	37.812	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115680	+		21022	19944	14207	14217							0.08271967428697735
KKGTHIVKH	9	Unmodified	_KKGTHIVKH_					0	0	0			REV__ENSG00000196350|ENST00000601693|ZNF729	REV__ENSG00000196350|ENST00000601693|ZNF729	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.3237915039062	2	524.324725	1046.6349	0.27206	0.00014265	-2.7651	-0.0014498	-2.493	-0.0013072	524.3228929656774	30.498	0.78591	30.502	30.054	30.84	0.0037212					44	17	3	0	0	0	0.71772	1	2005	2005		39.253	7.298	1	378110	+		21023	23117	14208	14218	24263	24263					0.11344550562330369
KKGTHKTN	8	Unmodified	_KKGTHKTN_					0	0	0			REV__nc|ENSG00000196268|Q6ZR52|ZNF493	REV__nc|ENSG00000196268|Q6ZR52|ZNF493	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.26263427734375	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.86677	1	8273	8273		27.882	2.4321	1	4597500	+		21024	23109	14209	14219	24264	24264					0.05435722848858404
KKGVPKGW	8	Unmodified	_KKGVPKGW_					0	0	0			REV__ENSG00000115138|ENST00000395826|POMC	REV__ENSG00000115138|ENST00000395826|POMC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2730407714844	2	450.276712	898.538872	-1.7763	-0.00079983	-2.7084	-0.0012195	-4.4848	-0.0020194	450.27542477894593	97.238	1.9021	97.44	96.704	98.606	0.20207					100	43	3	0	0	0	0.81548	1	10018	10018		20.482	2.1574	1	467580	+		21025	18088	14210	14220	24265	24265					0.08554402722222676
KKGVPKGW	8	Unmodified	_KKGVPKGW_					0	0	0			REV__ENSG00000115138|ENST00000395826|POMC	REV__ENSG00000115138|ENST00000395826|POMC	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	450.276712	898.538872	-0.14096	-6.3473E-05	-4.273	-0.001924	-4.414	-0.0019875	450.27464262035414	97.47	1.9024	97.527	96.988	98.891	0.056839	0.13512	-2.4238E-05	NaN	20.482	95	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	440070	+		21026	18088	14210	14220							0.08554402722222676
KKGVPKGW	8	Unmodified	_KKGVPKGW_					0	0	0			REV__ENSG00000115138|ENST00000395826|POMC	REV__ENSG00000115138|ENST00000395826|POMC	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	450.276712	898.538872	1.3279	0.00059792	-5.8067	-0.0026146	-4.4788	-0.0020167	450.2739759567012	97.221	2.0706	97.27	96.739	98.81	0.048164	-0.12246	-0.0014054	NaN	20.482	106	47	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	568810	+		21027	18088	14210	14220							0.08554402722222676
KKGVPKGW	8	Unmodified	_KKGVPKGW_					0	0	0			REV__ENSG00000115138|ENST00000395826|POMC	REV__ENSG00000115138|ENST00000395826|POMC	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	450.276712	898.538872	-1.2432	-0.0005598	-3.173	-0.0014287	-4.4163	-0.0019885	450.27515497762516	97.034	1.7878	97.265	96.695	98.483	0.23103	-0.12692	0.00096636	NaN	20.482	94	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	499470	+		21028	18088	14210	14220							0.08554402722222676
KKGVPKGW	8	Unmodified	_KKGVPKGW_					0	0	0			REV__ENSG00000115138|ENST00000395826|POMC	REV__ENSG00000115138|ENST00000395826|POMC	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	450.276712	898.538872	0.72241	0.00032529	-5.1919	-0.0023378	-4.4694	-0.0020125	450.2742724102636	97.22	1.8469	97.383	96.748	98.595	0.16316	-0.0088074	-0.00085169	NaN	20.482	99	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	387010	+		21029	18088	14210	14220							0.08554402722222676
KKGVPKGW	8	Unmodified	_KKGVPKGW_					0	0	0			REV__ENSG00000115138|ENST00000395826|POMC	REV__ENSG00000115138|ENST00000395826|POMC	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	450.276712	898.538872	-1.7763	-0.00079983	-2.7084	-0.0012195	-4.4848	-0.0020194	450.27542477894593	97.238	1.9021	97.44	96.704	98.606	0.20207	0.048043	0.0013848	NaN	20.482	100	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	467580	+		21030	18088	14210	14220							0.08554402722222676
KKGVPKGW	8	Unmodified	_KKGVPKGW_					0	0	0			REV__ENSG00000115138|ENST00000395826|POMC	REV__ENSG00000115138|ENST00000395826|POMC	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	450.276712	898.538872	0.70397	0.00031698	-5.0109	-0.0022563	-4.3069	-0.0019393	450.2743966186104	96.901	1.4806	97.306	96.759	98.24	0.40498	-0.086569	-0.00068869	NaN	20.482	58	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	233240	+		21031	18088	14210	14220							0.08554402722222676
KKGVPKGW	8	Unmodified	_KKGVPKGW_					0	0	0			REV__ENSG00000115138|ENST00000395826|POMC	REV__ENSG00000115138|ENST00000395826|POMC	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	450.276712	898.538872	1.0882	0.00048999	-5.6462	-0.0025424	-4.558	-0.0020524	450.2741430646559	97.112	1.6405	97.503	96.947	98.588	0.39065	0.11052	-0.0012609	NaN	20.482	60	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	262920	+		21032	18088	14210	14220							0.08554402722222676
KKGVSILH	8	Unmodified	_KKGVSILH_					0	0	0			REV__ENST00000590392.5_1_19:37203293-37203431:+|nuORF	REV__ENST00000590392.5_1_19:37203293-37203431:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.2857666015625	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.952	1	40.906	40.406	41.406	-0.045467								0	0	0	0.30252	1	2635	2635		19.36	0	1		+		21033	29181	14211	14221	24266	24266					0.10438385376664883
KKGWPKGK	8	Unmodified	_KKGWPKGK_					0	0	0		ENSG00000083168|ENST00000265713|KAT6A	ENSG00000083168|ENST00000265713|KAT6A	ENSG00000083168|ENST00000265713|KAT6A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.79046630859375	2	464.789987	927.565421	-1.9025	-0.00088428	3.506	0.0016296	1.6035	0.00074527	464.7914872059108	34.459	1.5924	34.459	34.009	35.601	0					104	42	3	0	0	0	0.86288	1	1882	1882		26.796	7.4361	1	277220			21034	1498	14212	14222	24267	24267					0.09874091613562541
KKGWPKGK	8	Unmodified	_KKGWPKGK_					0	0	0		ENSG00000083168|ENST00000265713|KAT6A	ENSG00000083168|ENST00000265713|KAT6A	ENSG00000083168|ENST00000265713|KAT6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.790283203125	2	464.789987	927.565421	-0.072724	-3.3801E-05	1.6528	0.00076819	1.58	0.00073439	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.85277	1	2135	2135		25.45	0	1	297050			21035	1498	14212	14222	24268	24268					0.09874091613562541
KKGWPKGK	8	Unmodified	_KKGWPKGK_					0	0	0		ENSG00000083168|ENST00000265713|KAT6A	ENSG00000083168|ENST00000265713|KAT6A	ENSG00000083168|ENST00000265713|KAT6A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.79071044921875	2	464.789987	927.565421	-1.1356	-0.00052781	2.4608	0.0011438	1.3252	0.00061596	464.7910242247121	36.975	1.5496	36.999	36.145	37.695	0.023624					81	41	3	0	0	0	0.86288	1	2101	2101		26.796	6.3143	1	297830			21036	1498	14212	14222	24269	24269					0.09874091613562541
KKHAVAIIFH	10	Unmodified	_KKHAVAIIFH_					0	0	0		ENSG00000206052|ENST00000382713|DOK6	ENSG00000206052|ENST00000382713|DOK6	ENSG00000206052|ENST00000382713|DOK6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.35302734375	2	582.356025	1162.6975	-1.3468	-0.00078434	-2.7668	-0.0016113	-4.1137	-0.0023956	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.85939	1	12810	12810		23.042	6.3251	1	3937500			21037	8551	14213	14223	24270	24270					0.12265696630493039
KKHEDFEKS	9	Unmodified	_KKHEDFEKS_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.2902221679688	2	574.290745	1146.56694	0.2625	0.00015075	-1.3386	-0.00076875	-1.0761	-0.000618	574.2898570404749	16.273	0.36927	15.675	15.555	15.924	-0.59873					15	7	3	0	0	0	0.41566	1	117	117		56.721	0	1	486150			21038	8189	14214	14224	24271	24271					-0.00048363879000135057
KKHIKKYFT	9	Unmodified	_KKHIKKYFT_					0	0	0			REV__ENST00000423554.5_1_5:154200818-154202893:-|nuORF	REV__ENST00000423554.5_1_5:154200818-154202893:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3623046875	2	596.863683	1191.71281	-0.14451	-8.6252E-05	-3.1068	-0.0018543	-3.2513	-0.0019406	596.8610968551181	80.806	1.3616	81.332	80.737	82.099	0.52677					43	32	2	0	0	0	0.20789	1	9380	9380		21.96	0	1	161430	+		21039	21643	14215	14225	24272	24272					0.12462563427698115
KKHISLISSRN	11	Unmodified	_KKHISLISSRN_					0	0	0			REV__nc|ENSG00000196268|Q6ZR52|ZNF493	REV__nc|ENSG00000196268|Q6ZR52|ZNF493	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8826904296875	2	641.883136	1281.75172	1.6823	0.0010798	-2.7332	-0.0017544	-1.051	-0.00067461	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.68532	1	10578	10578		33.922	4.7516	1	3772700	+		21040	23109	14216	14226	24273	24273					0.12211243991418996
KKHISLISSRN	11	Unmodified	_KKHISLISSRN_					0	0	0			REV__nc|ENSG00000196268|Q6ZR52|ZNF493	REV__nc|ENSG00000196268|Q6ZR52|ZNF493	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8822021484375	2	641.883136	1281.75172	0.89498	0.00057447	-2.058	-0.001321	-1.163	-0.00074653	641.8816647321656	95.707	2.6304	95.87	94.248	96.878	0.16316					218	62	4	0	0	0	0.72739	1	9957	9957		27.047	1.4733	1	2156900	+		21041	23109	14216	14226	24274	24274					0.12211243991418996
KKHKILIKR	9	Unmodified	_KKHKILIKR_					0	0	0			REV__nc|ENSG00000124181|P19174|PLCG1	REV__nc|ENSG00000124181|P19174|PLCG1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353271484375	2	582.408592	1162.80263	3.1784	0.0018511	-2.6174	-0.0015244	0.56098	0.00032672	582.4067430653613	103.47	0.76881	103.43	103.33	104.1	-0.043755					23	18	2	0	0	0	0.20789	1	11414	11414		6.3127	2.6283	1	111800	+		21042	18565	14217	14227	24275	24275					0.22774237826956778
KKHLFIGT	8	Unmodified	_KKHLFIGT_					0	0	0			REV__ENSG00000183977|ENST00000389050|PP2D1	REV__ENSG00000183977|ENST00000389050|PP2D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.287841796875	2	472.28982	942.565087	-0.108	-5.1006E-05	-4.4569	-0.0021049	-4.5649	-0.0021559	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.86288	1	10326	10326		26.796	2.5934	1	46909000	+		21043	22640	14218	14228	24276	24276					0.09150671893701201
KKHLSLLSTKP	11	Unmodified	_KKHLSLLSTKP_					0	0	0			REV__ENST00000336278.8_1_16:69337832-69338117:+|nuORF	REV__ENST00000336278.8_1_16:69337832-69338117:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.8897094726562	2	626.392805	1250.77106	1.3713	0.00085895	3.9729	0.0024886	5.3442	0.0033476	626.3955348303307	108.31	0.5534	108.44	108.28	108.83	0.13026					20	12	2	0	0	0	0.18003	1	11641	11641		15.333	10.721	1	544870	+		21044	25186	14219	14229	24277	24277					0.15570200282309088
KKHNRQIH	8	Unmodified	_KKHNRQIH_					0	0	0		L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|81|2|sense	L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|81|2|sense	L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|81|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8104858398438	2	530.809774	1059.60499	3.1482	0.0016711	-2.0866	-0.0011076	1.0616	0.0005635	530.8085142109409	103.14	0.35374	103.4	103.23	103.58	0.26524					14	8	2	0	0	0	0.9159	1	12587	12587		44.531	2.0566	1	853120			21045	14667	14220	14230	24278	24278					0.0775761161698938
KKHQILTSNQ	10	Unmodified	_KKHQILTSNQ_					0	0	0			REV__ENSG00000141946|ENST00000269834|ZIM3	REV__ENSG00000141946|ENST00000269834|ZIM3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.8078002929688	2	598.840936	1195.66732	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.83	1	112.77	112.27	113.27	-0.067215								0	0	0	0.45132	1	12249	12249		19.104	1.6355	1		+		21046	19715	14221	14231	24279	24279					0.07731293174674647
KKHRILKIYHL	11	Unmodified	_KKHRILKIYHL_					0	0	0		ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF;ENST00000533733.5_1_11:108158320-108160529:+|nuORF	ENSG00000149311|ENST00000675843|ATM	ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.98016357421875	3	483.645267	1447.91397	-1.6199	-0.00078345	3.8719	0.0018726	2.2521	0.0010892	483.64701567342865	46.699	1.7316	46.695	46.155	47.886	-0.0041618					198	50	6	0	0	0	0.80813	1	3917	3917		9.6461	0.84683	1	5137200			21047	5019	14222	14232	24280	24280					0.20793252464227407
KKHVRIHTRWP	11	Unmodified	_KKHVRIHTRWP_					0	0	0			REV__nc|ENSG00000288591|Q9Y2I9-3|TBC1D30	REV__nc|ENSG00000288591|Q9Y2I9-3|TBC1D30	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.6265563964844	3	486.624866	1456.85277	1.828	0.00088957	2.6885	0.0013083	4.5165	0.0021979	486.62614127219416	105.77	0.68383	105.9	105.62	106.3	0.12742					30	21	2	0	0	0	0.80593	1	12899	12899		10.104	0.45776	1	296400	+		21048	17872	14223	14233	24281	24281					0.1426174048476696
KKIAEKIEKNR	11	Unmodified	_KKIAEKIEKNR_					0	0	0			REV__ENSG00000196171|ENST00000359610|OR6K2	REV__ENSG00000196171|ENST00000359610|OR6K2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.9483947753906	3	452.948904	1355.82488	1.1591	0.00052504	-2.3142	-0.0010482	-1.1551	-0.00052319	452.947744260499	107.13	1.326	107.16	106.32	107.65	0.035622					97	30	5	0	0	0	0.71394	1	11779	11779		29.245	5.8671	1	2905000	+		21049	23098	14224	14234	24282	24282					0.16120372714044606
KKIAESSA	8	Unmodified	_KKIAESSA_					0	0	0			REV__nc|ENSG00000293135|Q8WWF6|DNAJB3	REV__nc|ENSG00000293135|Q8WWF6|DNAJB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.2398986816406	2	417.239993	832.465432	-0.18702	-7.8031E-05	-1.9097	-0.00079681	-2.0967	-0.00087484	417.23903257482436	88.499	3.1931	88.567	87.962	91.155	0.068161					142	75	3	0	0	0	0.87479	1	9030	9030		30.504	1.3541	1	1475100	+		21050	30307	14225	14235	24283	24283					0.04249809489101608
KKIAKGKP	8	Unmodified	_KKIAKGKP_					0	0	0			REV__ENST00000465478.1_1_8:93156318-93156576:-|nuORF	REV__ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.30029296875	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.81724	2	6800	6800;6867		14.664	0.88877	1	1680500	+		21051	27109	14226	14236	24284;24285	24284					0.14627262273370434
KKIAKGKP	8	Unmodified	_KKIAKGKP_					0	0	0			REV__ENST00000465478.1_1_8:93156318-93156576:-|nuORF	REV__ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3000793457031	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.83058	1	6473	6473		12.959	0	1	2081500	+		21052	27109	14226	14236	24286	24286					0.14627262273370434
KKIAPRALSSH	11	Unmodified	_KKIAPRALSSH_					0	0	0			REV__ENST00000524342.5_1_5:133478937-133482209:+|nuORF	REV__ENST00000524342.5_1_5:133478937-133482209:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3663940429688	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.70737	1	11343	11343		30.318	0	1	63350000	+		21053	28160	14227	14237	24287	24287					0.12459876308275852
KKIAVRVKNVN	11	Unmodified	_KKIAVRVKNVN_					0	0	0			REV__nc|ENSG00000100030|P28482-2|MAPK1	REV__nc|ENSG00000100030|P28482-2|MAPK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8927001953125	2	634.911696	1267.80884	0.93409	0.00059307	-0.51514	-0.00032707	0.41895	0.000266	634.9125685353645	105.49	0.19034	105.6	105.43	105.62	0.10766					6	4	2	0	0	0	0.17551	1	11237	11237		54.776	11.912	1	588240	+		21054	17127	14228	14238	24288	24288					0.18564711267799794
KKIAVRVKNVN	11	Unmodified	_KKIAVRVKNVN_					0	0	0			REV__nc|ENSG00000100030|P28482-2|MAPK1	REV__nc|ENSG00000100030|P28482-2|MAPK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8928833007812	2	634.911696	1267.80884	0.93435	0.00059323	1.0431	0.00066227	1.9774	0.0012555	634.9118373540813	105.72	0.42295	105.82	105.66	106.08	0.10766					22	10	3	0	0	0	0.16388	1	11297	11297		54.776	11.912	1	384720	+		21055	17127	14228	14238	24289	24289					0.18564711267799794
KKICFIKLFA	10	Unmodified	_KKICFIKLFA_					0	0	0			REV__nc|ENSG00000134489|Q9H3N8-2|HRH4	REV__nc|ENSG00000134489|Q9H3N8-2|HRH4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.8724975585938	2	605.872662	1209.73077	-1.2702	-0.00076958	0.27922	0.00016917	-0.99098	-0.00060041	605.8726634233227	100.16	1.4911	100.34	99.884	101.38	0.17199					100	34	4	0	0	0	0.85466	1	10372	10372		20.947	3.582	1	739750	+		21056	19145	14229	14239	24290	24290					0.13429562358192015
KKICFIKLFA	10	Unmodified	_KKICFIKLFA_					0	0	0			REV__nc|ENSG00000134489|Q9H3N8-2|HRH4	REV__nc|ENSG00000134489|Q9H3N8-2|HRH4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.8736572265625	2	605.872662	1209.73077	2.1175	0.0012829	-2.5271	-0.0015311	-0.40964	-0.00024819	605.8709120957792	99.886	1.4328	100.22	99.77	101.2	0.33295					98	35	4	0	0	0	0.85694	1	12062	12062		21.96	5.4867	1	1222300	+		21057	19145	14229	14239	24291	24291					0.13429562358192015
KKIEALPPDKL	11	Unmodified	_KKIEALPPDKL_					0	0	0		nc|ENSG00000175984|Q68D51-2|DENND2C;nc|ENSG00000175984|Q68D51-3|DENND2C;ENSG00000175984|ENST00000393274|DENND2C	nc|ENSG00000175984|Q68D51-2|DENND2C	nc|ENSG00000175984|Q68D51-2|DENND2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3919067382812	2	626.387188	1250.75982	0.92654	0.00058037	-2.4067	-0.0015075	-1.4802	-0.00092716	626.3854005656832	109.98	1.1023	110.05	109.78	110.88	0.073685					78	37	4	0	0	0	0.73893	1	11794	11794		24.519	1.4767	1	2583100			21058	7048	14230	14240	24292	24292					0.14447378188174298
KKIEISGT	8	Unmodified	_KKIEISGT_					0	0	0		nc|nan|Q5W0N0|C9orf57	nc|nan|Q5W0N0|C9orf57	nc|nan|Q5W0N0|C9orf57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2627258300781	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.8621	1	3107	3107		26.693	0	1	21381000			21059	15370	14231	14241	24293	24293					0.0701066904025538
KKIGLMIAS	9	Unmodified	_KKIGLMIAS_					0	0	0			REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.801025390625	2	480.799163	959.583773	-0.095215	-4.5779E-05	3.4854	0.0016758	3.3902	0.00163	480.80074135922035	95.38	4.3631	95.446	94.67	99.033	0.065918					323	101	5	0	0	0	0.74721	2	10147	10147;10218		37.159	12.956	1	17278000	+		21060	22776	14232	14242	24294;24295	24294					0.10236465473235512
KKIGLMIAS	9	Unmodified	_KKIGLMIAS_					0	0	0			REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.80120849609375	2	480.799163	959.583773	2.0445	0.00098299	1.3323	0.00064055	3.3768	0.0016235	480.7997098356697	95.287	4.3541	95.23	94.639	98.993	-0.057526					326	101	5	0	0	0	0.72402	2	10423	10410;10423		38.806	6.8513	1	19210000	+		21061	22776	14232	14242	24296;24297	24297					0.10236465473235512
KKIGLMIAS	9	Unmodified	_KKIGLMIAS_					0	0	0			REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.8011169433594	2	480.799163	959.583773	-0.54823	-0.00026359	3.9246	0.001887	3.3764	0.0016234	480.80093903656257	95.17	4.1898	95.217	94.619	98.809	0.046982					308	97	5	0	0	0	0.78058	1	10478	10478		30.504	7.4612	1	18729000	+		21062	22776	14232	14242	24298	24298					0.10236465473235512
KKIGLMIAS	9	Unmodified	_KKIGLMIAS_					0	0	0			REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.8009033203125	2	480.799163	959.583773	-0.79098	-0.0003803	4.1385	0.0019898	3.3475	0.0016095	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.74721	2	9901	9853;9901		37.159	5.9996	1	18644000	+		21063	22776	14232	14242	24299;24300	24300					0.10236465473235512
KKIGLMIAS	9	Unmodified	_KKIGLMIAS_					0	0	0			REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8009338378906	2	480.799163	959.583773	0.73477	0.00035328	2.7032	0.0012997	3.438	0.001653	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.58151	1	9892	9892		47.916	15.961	1	18148000	+		21064	22776	14232	14242	24301	24301					0.10236465473235512
KKIGLMIAS	9	Unmodified	_KKIGLMIAS_					0	0	0			REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.8013000488281	2	480.799163	959.583773	1.8222	0.00087609	2.1635	0.0010402	3.9856	0.0019163	480.8000859655465	94.893	2.2797	95.326	94.801	97.081	0.4324					179	54	5	0	0	0	0.78058	1	11302	11302		30.504	3.7075	1	7713500	+		21065	22776	14232	14242	24302	24302					0.10236465473235512
KKIGLMIAS	9	Unmodified	_KKIGLMIAS_					0	0	0			REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	REV__nc|ENSG00000185585|Q68BL7-2|OLFML2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.8011474609375	2	480.799163	959.583773	-0.2736	-0.00013155	4.2609	0.0020487	3.9873	0.0019171	480.80110367170755	95.033	3.9341	95.453	94.933	98.867	0.41964					263	95	5	0	0	0	0.77546	1	11511	11511		31.955	3.7006	1	9403500	+		21066	22776	14232	14242	24303	24303					0.10236465473235512
KKIHKNAL	8	Unmodified	_KKIHKNAL_					0	0	0		nc|ENSG00000157637|Q9HBR0-3|SLC38A10;nc|ENSG00000157637|Q9HBR0-2|SLC38A10;ENSG00000157637|ENST00000374759|SLC38A10	nc|ENSG00000157637|Q9HBR0-3|SLC38A10	nc|ENSG00000157637|Q9HBR0-3|SLC38A10	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.30438232421875	2	476.308544	950.602535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.05	1	119.08	118.58	119.58	0.026466								0	0	0	0.30125	1	13106	13106		20.482	0	1				21067	5443	14233	14243	24304	24304					0.12525763159305825
KKIHLRPYV	9	Unmodified	_KKIHLRPYV_					0	0	0			REV__ENST00000374660.5_1_10:37442527-37442566:+|nuORF	REV__ENST00000374660.5_1_10:37442527-37442566:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	577.3658447265625	2	577.36385	1152.71315	0.74116	0.00042792	3.7364	0.0021573	4.4775	0.0025852	577.3658570064985	102.18	2.9839	102.23	101.81	104.79	0.043198					214	72	5	0	0	0	0.7932	1	11002	11002		25.45	3.4903	1	10154000	+		21068	25789	14234	14244	24305	24305					0.14289983147546081
KKIIKEQPQPS	11	Unmodified	_KKIIKEQPQPS_					0	0	0		nc|ENSG00000148773|P46013-2|MKI67;chr10:128113602-128116491|53|23.43|0.71|5.05|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67	nc|ENSG00000148773|P46013-2|MKI67	nc|ENSG00000148773|P46013-2|MKI67	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3921508789062	2	648.387719	1294.76089	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.6	1	116.58	116.08	117.08	-0.02433								0	0	0	0.56276	1	12915	12915		21.686	0.8486	1				21069	66	14235	14245	24306	24306					0.12529592557098113
KKIILEAQLLG	11	Unmodified	_KKIILEAQLLG_					0	0	0		nc|ENSG00000173612|Q5T6X5-2|GPRC6A	nc|ENSG00000173612|Q5T6X5-2|GPRC6A	nc|ENSG00000173612|Q5T6X5-2|GPRC6A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	409.26690673828125	3	409.267463	1224.78056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.808	1	16.853	16.353	17.353	0.0457								0	0	0	0.56276	1	190	190		18.531	1.8137	1				21070	15102	14236	14246	24307	24307					0.17715968567858909
KKIIRKITT	9	Unmodified	_KKIIRKITT_					0	0	0			REV__nc|ENSG00000159640|P12821-2|ACE	REV__nc|ENSG00000159640|P12821-2|ACE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.8796997070312	2	550.879333	1099.74411	3.4101	0.0018786	-3.6109	-0.0019892	-0.20073	-0.00011058	550.8772112738451	108.99	0.56081	108.96	108.67	109.23	-0.029381					52	22	3	0	0	0	0.7932	1	12079	12079		18.324	0.95945	1	2297500	+		21071	20671	14237	14247	24308	24308					0.19823136461786817
KKIKEHVRSK	10	Unmodified	_KKIKEHVRSK_					0	0	0		ENSG00000213886|ENST00000377050|UBD	ENSG00000213886|ENST00000377050|UBD	ENSG00000213886|ENST00000377050|UBD	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.26654052734375	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.263	1	50.293	49.793	50.793	0.029629								0	0	0	0.45132	1	3938	3938		19.263	2.0959	1				21072	8603	14238	14248	24309	24309					0.16172138233696387
KKIKEHVRSK	10	Unmodified	_KKIKEHVRSK_					0	0	0		ENSG00000213886|ENST00000377050|UBD	ENSG00000213886|ENST00000377050|UBD	ENSG00000213886|ENST00000377050|UBD	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.26556396484375	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.257	1	50.165	49.665	50.665	-0.091797								0	0	0	0.45132	1	3939	3939		29.551	5.3189	1				21073	8603	14238	14248	24310	24310					0.16172138233696387
KKIKLEAM	8	Unmodified	_KKIKLEAM_					0	0	0		nc|ENSG00000276644|Q9UI36-3|DACH1;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.8010559082031	2	480.799163	959.583773	-0.095215	-4.5779E-05	3.4854	0.0016758	3.3902	0.00163	480.80074135922035	95.38	4.3631	95.446	94.67	99.033	0.065918					323	101	5	0	0	0	0.87479	1	10109	10109		30.504	2.2494	1	17278000			21074	9015	14239	14249	24311	24311					0.10236465473235512
KKIKLEAM	8	Unmodified	_KKIKLEAM_					0	0	0		nc|ENSG00000276644|Q9UI36-3|DACH1;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.8007507324219	2	480.799163	959.583773	2.0445	0.00098299	1.3323	0.00064055	3.3768	0.0016235	480.7997098356697	95.287	4.3541	95.23	94.639	98.993	-0.057526					326	101	5	0	0	0	0.87479	2	10388	10246;10388		31.955	2.2494	1	19210000			21075	9015	14239	14249	24312;24313	24313					0.10236465473235512
KKIKLEAM	8	Unmodified	_KKIKLEAM_					0	0	0		nc|ENSG00000276644|Q9UI36-3|DACH1;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.8006286621094	2	480.799163	959.583773	-0.54823	-0.00026359	3.9246	0.001887	3.3764	0.0016234	480.80093903656257	95.17	4.1898	95.217	94.619	98.809	0.046982					308	97	5	0	0	0	0.84341	1	10267	10267		24.203	2.5004	1	18729000			21076	9015	14239	14249	24314	24314					0.10236465473235512
KKIKLEAM	8	Unmodified	_KKIKLEAM_					0	0	0		nc|ENSG00000276644|Q9UI36-3|DACH1;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.80078125	2	480.799163	959.583773	-0.79098	-0.0003803	4.1385	0.0019898	3.3475	0.0016095	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.87922	2	9865	9865;9924		37.159	8.9048	1	18644000			21077	9015	14239	14249	24315;24316	24315					0.10236465473235512
KKIKLEAM	8	Unmodified	_KKIKLEAM_					0	0	0		nc|ENSG00000276644|Q9UI36-3|DACH1;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8011779785156	2	480.799163	959.583773	0.73477	0.00035328	2.7032	0.0012997	3.438	0.001653	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.84341	1	9880	9880		24.203	0	1	18148000			21078	9015	14239	14249	24317	24317					0.10236465473235512
KKIKLEAM	8	Unmodified	_KKIKLEAM_					0	0	0		nc|ENSG00000276644|Q9UI36-3|DACH1;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.80108642578125	2	480.799163	959.583773	1.8222	0.00087609	2.1635	0.0010402	3.9856	0.0019163	480.8000859655465	94.893	2.2797	95.326	94.801	97.081	0.4324					179	54	5	0	0	0	0.87922	2	11374	11374;11400		31.955	3.7006	1	7713500			21079	9015	14239	14249	24318;24319	24318					0.10236465473235512
KKILFVWV	8	Unmodified	_KKILFVWV_					0	0	0			REV__ENST00000547933.1_1_17:3593719-3599299:-|nuORF	REV__ENST00000547933.1_1_17:3593719-3599299:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.8150024414062	2	516.833863	1031.65317	0.12239	6.3258E-05	1.4757	0.00076271	1.5981	0.00082597	516.8339461726069	19.82	0.41428	19.191	18.983	19.397	-0.62961					11	8	2	0	0	0	0.4196	1	569	569		7.1934	0.8807	1	34740	+		21080	16854	14240	14250	24320	24320					0.13861292484307342
KKILFVWV	8	Unmodified	_KKILFVWV_					0	0	0			REV__ENST00000547933.1_1_17:3593719-3599299:-|nuORF	REV__ENST00000547933.1_1_17:3593719-3599299:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	516.833863	1031.65317	0.0979	5.0598E-05	1.6052	0.00082963	1.7031	0.00088023	517.3365988938045	19.291	0.34789	19.361	19.123	19.471	0.070711	0.08539	7.6626E-05	NaN	7.1934	23	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138300	+		21081	16854	14240	14250							0.13861292484307342
KKILGYINTG	10	Unmodified	_KKILGYINTG_					0	0	0		nc|ENSG00000111275|P05091-2|ALDH2;ENST00000548536.1_1_12:112213467-112247376:+|nuORF;ENSG00000111275|ENST00000261733|ALDH2	nc|ENSG00000111275|P05091-2|ALDH2	nc|ENSG00000111275|P05091-2|ALDH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.830078125	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.86272	1	8766	8766		24.519	1.4767	1	1728300			21082	2569	14241	14251	24321	24321					0.10094577919812764
KKILKESRQR	10	Unmodified	_KKILKESRQR_					0	0	0		ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-3|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH	ENSG00000103599|ENST00000335894|IQCH	ENSG00000103599|ENST00000335894|IQCH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4059448242188	2	643.406778	1284.799	0.024155	1.5542E-05	-1.2013	-0.00077294	-1.1772	-0.0007574	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.77314	4	10958	10901;10910;10958;10994		40.778	8.0276	1	11188000			21083	2094	14242	14252	24322;24323;24324;24325	24324					0.16799523262397997
KKILKESRQR	10	Unmodified	_KKILKESRQR_					0	0	0		ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-3|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH	ENSG00000103599|ENST00000335894|IQCH	ENSG00000103599|ENST00000335894|IQCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4057006835938	2	643.406778	1284.799	-0.02708	-1.7423E-05	-1.3385	-0.00086122	-1.3656	-0.00087865	643.4057840301668	105.94	1.5968	105.91	105.23	106.82	-0.025146					165	37	6	0	0	0	0.6116	2	11441	11430;11441		49.442	11.63	1	14580000			21084	2094	14242	14252	24326;24327	24327					0.16799523262397997
KKILKESRQR	10	Unmodified	_KKILKESRQR_					0	0	0		ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-3|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH	ENSG00000103599|ENST00000335894|IQCH	ENSG00000103599|ENST00000335894|IQCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4059448242188	2	643.406778	1284.799	2.6785	0.0017233	-4.0081	-0.0025788	-1.3296	-0.00085549	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.8608	2	11776	11666;11776		34.173	8.5985	1	14704000			21085	2094	14242	14252	24328;24329	24329					0.16799523262397997
KKILKESRQR	10	Unmodified	_KKILKESRQR_					0	0	0		ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-3|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH	ENSG00000103599|ENST00000335894|IQCH	ENSG00000103599|ENST00000335894|IQCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4059448242188	2	643.406778	1284.799	1.7782	0.0011441	-3.0269	-0.0019475	-1.2486	-0.00080338	643.4046886151041	105.77	1.7293	105.8	105.04	106.77	0.038322					167	40	5	0	0	0	0.86348	1	11568	11568		31.53	1.2121	1	14066000			21086	2094	14242	14252	24330	24330					0.16799523262397997
KKILKESRQR	10	Unmodified	_KKILKESRQR_					0	0	0		ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-3|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH	ENSG00000103599|ENST00000335894|IQCH	ENSG00000103599|ENST00000335894|IQCH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4054565429688	2	643.406778	1284.799	1.6039	0.001032	-2.7438	-0.0017654	-1.1399	-0.00073343	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.5766	4	11264	11193;11264;11406;11516		51.335	13.524	1	21138000			21087	2094	14242	14252	24331;24332;24333;24334	24332					0.16799523262397997
KKILKESRQR	10	Unmodified	_KKILKESRQR_					0	0	0		ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-3|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH	ENSG00000103599|ENST00000335894|IQCH	ENSG00000103599|ENST00000335894|IQCH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4052124023438	2	643.406778	1284.799	0.94326	0.0006069	-1.4069	-0.0009052	-0.46364	-0.00029831	643.4057417471539	106.19	1.8486	106.29	106.11	107.96	0.099007					180	44	5	0	0	0	0.70553	2	11348	11348;11369		44.377	5.6261	1	16037000			21088	2094	14242	14252	24335;24336	24335					0.16799523262397997
KKILKESRQR	10	Unmodified	_KKILKESRQR_					0	0	0		ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-3|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH	ENSG00000103599|ENST00000335894|IQCH	ENSG00000103599|ENST00000335894|IQCH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.40576171875	2	643.406778	1284.799	-1.1464	-0.0007376	-0.28555	-0.00018372	-1.4319	-0.00092132	643.406459620359	105.63	1.1927	105.7	104.97	106.16	0.073112					153	29	6	0	0	0	0.64457	2	11224	11224;11261		47.657	6.2307	1	22367000			21089	2094	14242	14252	24337;24338	24337					0.16799523262397997
KKILMKSVLLI	11	Unmodified	_KKILMKSVLLI_					0	0	0		ENST00000330198.8_2_3:197770265-197770433:+|nuORF	ENST00000330198.8_2_3:197770265-197770433:+|nuORF	ENST00000330198.8_2_3:197770265-197770433:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4059448242188	2	643.435627	1284.8567	-1.1467	-0.00073781	0.74582	0.00047989	-0.40085	-0.00025792	643.4358599676149	106.42	0.43234	106.48	106.26	106.69	0.053757					10	9	2	0	0	0	0.17318	1	11319	11319		32.812	6.1195	1	39340			21090	10107	14243	14253	24339	24339					0.2256664914364137
KKILYIQSSA	10	Unmodified	_KKILYIQSSA_					0	0	0			REV__ENST00000405334.5_1_2:37334471-37336383:-|nuORF	REV__ENST00000405334.5_1_2:37334471-37336383:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8431396484375	2	575.845156	1149.67576	-0.99734	-0.00057431	-2.9254	-0.0016846	-3.9227	-0.0022589	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.80179	2	9444	9444;9468		39.253	8.7492	1	5638300	+		21091	26289	14244	14254	24340;24341	24340					0.10690847091291289
KKIMDWFG	8	Unmodified	_KKIMDWFG_					0	0	0		nc|ENSG00000241935|Q86XE5-3|HOGA1;ENSG00000241935|ENST00000370646|HOGA1	nc|ENSG00000241935|Q86XE5-3|HOGA1	nc|ENSG00000241935|Q86XE5-3|HOGA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.7684936523438	2	512.767863	1023.52117	0.15873	8.1392E-05	3.4814	0.0017851	3.6401	0.0018665	512.76945041	30.19	0.77853	30.175	29.843	30.622	-0.015167					37	18	3	0	0	0	0.85277	1	1595	1595		25.45	1.2474	1	129150			21092	8797	14245	14255	24342	24342					0.010353194050594539
KKIMIYLL	8	Unmodified	_KKIMIYLL_					0	0	0		ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000605810.1_1_3:70174691-70175321:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.3273010253906	2	511.327556	1020.64056	0.52337	0.00026762	-1.3677	-0.00069932	-0.84429	-0.00043171	511.3267559398498	97.201	2.4372	97.249	96.783	99.22	0.048157					148	56	4	0	0	0	0.83466	1	10367	10367		23.037	0	1	1880900			21093	14435	14246	14256	24343	24343					0.13106513029754296
KKINFHKITL	10	Unmodified	_KKINFHKITL_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.3925170898438	2	621.390065	1240.76558	2.1086	0.0013103	2.5756	0.0016005	4.6842	0.0029107	621.3915992412323	104.3	2.0291	104.48	104.04	106.07	0.18888					138	51	4	0	0	0	0.86718	1	12718	12718		27.882	1.1893	1	1168000			21094	2784	14247	14257	24344	24344					0.15482521490503132
KKINQRRY	8	Unmodified	_KKINQRRY_					0	0	0		ENSG00000116194|ENST00000234816|ANGPTL1	ENSG00000116194|ENST00000234816|ANGPTL1	ENSG00000116194|ENST00000234816|ANGPTL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.3336181640625	2	553.333082	1104.65161	0.81959	0.00045351	-2.0317	-0.0011242	-1.2121	-0.00067069	553.3317918445606	96.793	1.7474	96.956	96.403	98.15	0.16317					118	40	4	0	0	0	0.884	1	9941	9941		33.516	6.7195	1	2701500			21095	2908	14248	14258	24345	24345					0.10347051448275124
KKIPKDQKS	9	Unmodified	_KKIPKDQKS_					0	0	0		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	536.6649169921875	2	536.329673	1070.64479	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.689	1	65.689	65.189	66.189	0								0	0	0	0.29796	1	5801	5801		31.53	3.6476	1				21096	4382	14249	14259	24346	24346					0.11229693777045213
KKIPLNKYLV	10	Unmodified	_KKIPLNKYLV_					0	0	0			REV__ENST00000441488.6_1_11:67925157-67938746:-|nuORF	REV__ENST00000441488.6_1_11:67925157-67938746:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78515625	3	405.932303	1214.77508	1.5521	0.00063005	-0.036594	-1.4855E-05	1.5155	0.0006152	405.93222043817957	34.929	1.3633	34.936	34.293	35.656	0.0063934					68	32	3	0	0	0	0.37624	1	2132	2132		47.96	16.325	1	210910	+		21097	17792	14250	14260	24347	24347					0.17628289776007477
KKIQIQRNPN	10	Unmodified	_KKIQIQRNPN_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|74|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|74|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.869140625	2	619.870028	1237.7255	0.62246	0.00038584	-1.8404	-0.0011408	-1.2179	-0.00075497	619.8687823008486	94.059	2.9324	94.104	92.154	95.087	0.045448					223	69	4	0	0	0	0.74274	1	10004	10004		42.396	0.96952	1	2371600	+		21098	29638	14251	14261	24348	24348					0.11614974819940471
KKIQITSSVF	10	Unmodified	_KKIQITSSVF_					0	0	0		nc|ENSG00000137691|Q9BRQ4-2|CFAP300;ENST00000530659.1_1_11:101918495-101953927:+|nuORF;ENSG00000137691|ENST00000434758|CFAP300	nc|ENSG00000137691|Q9BRQ4-2|CFAP300	nc|ENSG00000137691|Q9BRQ4-2|CFAP300	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8428344726562	2	575.845156	1149.67576	-0.99796	-0.00057467	-2.8602	-0.001647	-3.8582	-0.0022217	575.8433464319414	90.672	2.8412	90.741	88.754	91.595	0.069328					215	67	4	0	0	0	0.80179	1	9307	9307		39.253	0.44669	1	1885000			21099	4224	14252	14262	24349	24349					0.10690847091291289
KKIQITSSVF	10	Unmodified	_KKIQITSSVF_					0	0	0		nc|ENSG00000137691|Q9BRQ4-2|CFAP300;ENST00000530659.1_1_11:101918495-101953927:+|nuORF;ENSG00000137691|ENST00000434758|CFAP300	nc|ENSG00000137691|Q9BRQ4-2|CFAP300	nc|ENSG00000137691|Q9BRQ4-2|CFAP300	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8427734375	2	575.845156	1149.67576	0.60609	0.00034901	-4.3948	-0.0025308	-3.7888	-0.0021817	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.8651	1	8942	8942		25.574	0.12388	1	2381900			21100	4224	14252	14262	24350	24350					0.10690847091291289
KKIQNKGLDLY	11	Unmodified	_KKIQNKGLDLY_					0	0	0			REV__ENSG00000240720|ENST00000458448|LRRD1	REV__ENSG00000240720|ENST00000458448|LRRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.5943908691406	3	440.594238	1318.76089	-0.019721	-8.689E-06	1.2814	0.00056456	1.2616	0.00055587	440.59463679641283	25.358	1.7124	25.03	24.476	26.188	-0.32825					109	38	4	0	0	0	0.74405	1	1321	1321		23.378	1.5975	1	990660	+		21101	23814	14253	14263	24351	24351					0.11425592557088748
KKIRPRGPK	9	Unmodified	_KKIRPRGPK_					0	0	0			REV__ENSG00000153147|ENST00000283131|SMARCA5	REV__ENSG00000153147|ENST00000283131|SMARCA5	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.3616333007812	2	540.361642	1078.70873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.83	1	44.761	44.261	45.261	-0.068634								0	0	0	0.33676	1	3184	3184		18.324	0.95945	1		+		21102	20333	14254	14264	24352	24352					0.17252518724649235
KKIRRKREFR	10	Unmodified	_KKIRRKREFR_					0	0	0		ENST00000465873.5_1_9:138834060-138837107:-|nuORF;ENST00000471163.1_1_9:138834060-138839712:-|nuORF;ENSG00000130560|ENST00000371756|UBAC1	ENST00000465873.5_1_9:138834060-138837107:-|nuORF	ENST00000465873.5_1_9:138834060-138837107:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.9708251953125	3	472.972266	1415.89497	-0.95095	-0.00044977	-1.8197	-0.00086067	-2.7707	-0.0013104	472.971385713144	49.546	3.8081	49.55	48.972	52.78	0.0035973					232	95	4	0	0	0	0.89119	1	4260	4260		10.587	0.94066	1	1400600			21103	3657	14255	14265	24353	24353					0.20365715893126435
KKIRRKREFR	10	Unmodified	_KKIRRKREFR_					0	0	0		ENST00000465873.5_1_9:138834060-138837107:-|nuORF;ENST00000471163.1_1_9:138834060-138839712:-|nuORF;ENSG00000130560|ENST00000371756|UBAC1	ENST00000465873.5_1_9:138834060-138837107:-|nuORF	ENST00000465873.5_1_9:138834060-138837107:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.9709167480469	3	472.972266	1415.89497	0.3106	0.00014691	-3.0231	-0.0014298	-2.7125	-0.0012829	473.3050663884793	49.019	2.0636	49.057	48.411	50.474	0.037731					160	51	5	0	0	0	0.91405	1	3810	3810		7.0187	1.0176	1	2073100			21104	3657	14255	14265	24354	24354					0.20365715893126435
KKIRRKREFR	10	Unmodified	_KKIRRKREFR_					0	0	0		ENST00000465873.5_1_9:138834060-138837107:-|nuORF;ENST00000471163.1_1_9:138834060-138839712:-|nuORF;ENSG00000130560|ENST00000371756|UBAC1	ENST00000465873.5_1_9:138834060-138837107:-|nuORF	ENST00000465873.5_1_9:138834060-138837107:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.9707946777344	3	472.972266	1415.89497	-0.32273	-0.00015264	-2.3492	-0.0011111	-2.6719	-0.0012637	472.97110855573317	48.963	2.2671	48.87	48.252	50.519	-0.093182					180	57	5	0	0	0	0.89119	1	3805	3805		10.587	1.375	1	1641600			21105	3657	14255	14265	24355	24355					0.20365715893126435
KKISLPMSA	9	Unmodified	_KKISLPMSA_					0	0	0		ENSG00000158169|ENST00000289081|FANCC	ENSG00000158169|ENST00000289081|FANCC	ENSG00000158169|ENST00000289081|FANCC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7906799316406	2	487.788795	973.563038	0.84663	0.00041298	2.8765	0.0014031	3.7232	0.0018161	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.7932	1	8542	8542		21.96	1.013	1	2238600			21106	5466	14256	14266	24356	24356					0.0751987509358969
KKISLPMSA	9	Unmodified	_KKISLPMSA_					0	0	0		ENSG00000158169|ENST00000289081|FANCC	ENSG00000158169|ENST00000289081|FANCC	ENSG00000158169|ENST00000289081|FANCC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7904968261719	2	487.788795	973.563038	-0.70733	-0.00034503	4.3989	0.0021457	3.6915	0.0018007	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.69624	1	8298	8298		40.778	6.8565	1	2348200			21107	5466	14256	14266	24357	24357					0.0751987509358969
KKISLPMSA	9	Unmodified	_KKISLPMSA_					0	0	0		ENSG00000158169|ENST00000289081|FANCC	ENSG00000158169|ENST00000289081|FANCC	ENSG00000158169|ENST00000289081|FANCC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7906799316406	2	487.788795	973.563038	-0.24073	-0.00011743	4.0932	0.0019966	3.8524	0.0018792	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.78536	1	9971	9971		29.15	1.2673	1	1981400			21108	5466	14256	14266	24358	24358					0.0751987509358969
KKISTLISKY	10	Unmodified	_KKISTLISKY_					0	0	0			REV__ENSG00000162994|ENST00000401408|CLHC1	REV__ENSG00000162994|ENST00000401408|CLHC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8668823242188	2	590.868631	1179.72271	-0.64254	-0.00037966	-3.2896	-0.0019437	-3.9321	-0.0023234	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.85834	1	11400	11400		22.58	3.4761	1	52912000	+		21109	20870	14257	14267	24359	24359					0.14003706642415636
KKITKRMMA	9	Unmodified	_KKITKRMMA_					0	0	0			REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.830078125	2	553.830472	1105.64639	-0.60953	-0.00033757	0.10769	5.9644E-05	-0.50183	-0.00027793	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.78058	1	8755	8755		30.504	5.9844	1	3935500	+		21110	28982	14258	14268	24360	24360					0.09779288269783137
KKITKRMMA	9	Unmodified	_KKITKRMMA_					0	0	0			REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8300170898438	2	553.830472	1105.64639	1.7761	0.00098364	-2.5621	-0.001419	-0.786	-0.00043531	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.78058	1	9314	9314		30.504	6.3009	1	1628400	+		21111	28982	14258	14268	24361	24361					0.09779288269783137
KKITKRMMA	9	Unmodified	_KKITKRMMA_					0	0	0			REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8298950195312	2	553.830472	1105.64639	2.0416	0.0011307	-2.617	-0.0014494	-0.57539	-0.00031867	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.7932	1	9467	9467		24.203	1.1603	1	5457600	+		21112	28982	14258	14268	24362	24362					0.09779288269783137
KKITKRMMA	9	Unmodified	_KKITKRMMA_					0	0	0			REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8303833007812	2	553.830472	1105.64639	1.287	0.00071279	-1.8248	-0.0010106	-0.53781	-0.00029785	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.72402	2	9242	9242;9360		38.806	14.603	1	5348100	+		21113	28982	14258	14268	24363;24364	24363					0.09779288269783137
KKITKRMMA	9	Unmodified	_KKITKRMMA_					0	0	0			REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8297729492188	2	553.830472	1105.64639	0.28171	0.00015602	-0.78525	-0.0004349	-0.50354	-0.00027888	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.78536	1	9023	9023		29.15	1.2673	1	6402500	+		21114	28982	14258	14268	24365	24365					0.09779288269783137
KKITKRMMA	9	Unmodified	_KKITKRMMA_					0	0	0			REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8306884765625	2	553.830472	1105.64639	0.84671	0.00046893	-0.89873	-0.00049774	-0.052019	-2.881E-05	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.7932	1	10800	10800		23.042	1.0826	1	5381700	+		21115	28982	14258	14268	24366	24366					0.09779288269783137
KKIVIYSKQHI	11	Unmodified	_KKIVIYSKQHI_					0	0	0		ENSG00000139718|ENST00000604567|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B	ENSG00000139718|ENST00000604567|SETD1B	ENSG00000139718|ENST00000604567|SETD1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.9483947753906	3	452.950245	1355.82891	-0.13654	-6.1846E-05	-3.9622	-0.0017947	-4.0988	-0.0018565	452.9483614950571	107.37	0.93114	107.33	106.73	107.66	-0.034409					72	21	5	0	0	0	0.74405	1	11711	11711		23.378	0.81632	1	2765200			21116	4392	14259	14269	24367	24367					0.16522462207740318
KKIVKVIDPN	10	Unmodified	_KKIVKVIDPN_					0	0	0			REV__nc|ENSG00000174371|Q9UQ84-4|EXO1	REV__nc|ENSG00000174371|Q9UQ84-4|EXO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.366455078125	2	577.368798	1152.72304	-0.31736	-0.00018324	-3.4769	-0.0020075	-3.7943	-0.0021907	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.8608	1	10546	10546		34.173	3.6689	1	6617600	+		21117	21988	14260	14270	24368	24368					0.1527912636227029
KKIVKVIDPN	10	Unmodified	_KKIVKVIDPN_					0	0	0			REV__nc|ENSG00000174371|Q9UQ84-4|EXO1	REV__nc|ENSG00000174371|Q9UQ84-4|EXO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.3663940429688	2	577.368798	1152.72304	-0.96039	-0.0005545	-2.9913	-0.0017271	-3.9517	-0.0022816	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.8608	2	11016	11016;11101		34.173	2.4902	1	9850700	+		21118	21988	14260	14270	24369;24370	24369					0.1527912636227029
KKIVRLHCI	9	Unmodified	_KKIVRLHCI_					0	0	0			REV__chr18:2615314-2616437|16|17.5|0.11|7.35|+|0|NDC80,NDC80|1	REV__chr18:2615314-2616437|16|17.5|0.11|7.35|+|0|NDC80,NDC80|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3532104492188	2	555.352428	1108.6903	0.85674	0.00047579	0.63766	0.00035412	1.4944	0.00082991	555.3526695275054	100.86	2.5278	101	100.46	102.99	0.14352					194	61	5	0	0	0	0.7932	2	10549	10549;10667		19.36	1.995	1	5097700	+		21119	15671	14261	14271	24371;24372	24371					0.14030640758414847
KKKAILKM	8	Unmodified	_KKKAILKM_					0	0	0		ENST00000336735.8_1_14:81942796-81942856:-|nuORF	ENST00000336735.8_1_14:81942796-81942856:-|nuORF	ENST00000336735.8_1_14:81942796-81942856:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.3273620605469	2	480.325348	958.636143	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.722	1	15.78	15.28	16.28	0.057872								0	0	0	0.31173	1	67	67		8.8223	1.132	1				21120	10175	14262	14272	24373	24373					0.15517048606864137
KKKAMLHQ	8	Unmodified	_KKKAMLHQ_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.3004150390625	2	492.294579	982.574605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.678	1	59.678	59.178	60.178	0								0	0	0	0.29631	1	5201	5201		25.45	0.93098	1				21121	8027	14263	14273	24374	24374					0.08262116907587824
KKKAVAKP	8	Unmodified	_KKKAVAKP_					0	0	0			REV__ENST00000301998.4_1_2:62449407-62449476:+|nuORF	REV__ENST00000301998.4_1_2:62449407-62449476:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.30023193359375	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.82419	1	6575	6575		13.775	0	1	2081500	+		21122	24776	14264	14274	24375	24375					0.14627262273359065
KKKCANPD	8	Unmodified	_KKKCANPD_					0	0	0		ENST00000427137.1_1_7:46039864-46040332:-|nuORF	ENST00000427137.1_1_7:46039864-46040332:-|nuORF	ENST00000427137.1_1_7:46039864-46040332:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9432067871094	2	452.23947	902.464386	-0.618	-0.00027948	-1.3428	-0.00060729	-1.9608	-0.00088677	452.2387571648258	55.551	0.79391	55.515	55.033	55.827	-0.036827					45	25	2	0	0	0	0.4196	1	4667	4667		15.642	0	1	113560			21123	11567	14265	14275	24376	24376					0.009252718485299738
KKKDGHTN	8	Unmodified	_KKKDGHTN_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2537536621094	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.89291	4	7991	7884;7954;7991;8026		47.657	2.9538	1	946850			21124	9132	14266	14276	24377;24378;24379;24380	24379					0.027191324691898444
KKKDGHTN	8	Unmodified	_KKKDGHTN_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.25390625	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.88601	6	8309	8309;8332;8368;8440;8501;8560		52.937	13.16	1	1449300			21125	9132	14266	14276	24381;24382;24383;24384;24385;24386	24381					0.027191324691898444
KKKDGHTN	8	Unmodified	_KKKDGHTN_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2537841796875	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.58928	1	8719	8719		71.877	21.853	1	1578600			21126	9132	14266	14276	24387	24387					0.027191324691898444
KKKDGHTN	8	Unmodified	_KKKDGHTN_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2541198730469	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.88185	5	8442	8442;8515;8539;8563;8611		47.657	8.4045	1	1673200			21127	9132	14266	14276	24388;24389;24390;24391;24392	24388					0.027191324691898444
KKKDGHTN	8	Unmodified	_KKKDGHTN_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25384521484375	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.89291	2	8218	8218;8280		47.657	6.8792	1	1603800			21128	9132	14266	14276	24393;24394	24393					0.027191324691898444
KKKDGHTN	8	Unmodified	_KKKDGHTN_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25384521484375	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.88217	4	8265	8109;8168;8204;8265		58.23	11.463	1	1482000			21129	9132	14266	14276	24395;24396;24397;24398	24398					0.027191324691898444
KKKDGHTN	8	Unmodified	_KKKDGHTN_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.25408935546875	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.89291	2	8099	8086;8099		44.377	6.129	1	1324500			21130	9132	14266	14276	24399;24400	24400					0.027191324691898444
KKKDGHTN	8	Unmodified	_KKKDGHTN_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.25341796875	2	464.253966	926.493378	-0.76573	-0.00035549	0.99904	0.00046381	0.2333	0.00010831	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.90983	2	9669	9669;9717		44.377	2.338	1	1046600			21131	9132	14266	14276	24401;24402	24401					0.027191324691898444
KKKDISLEHLL	11	Unmodified	_KKKDISLEHLL_					0	0	0		ENSG00000216937|ENST00000639629|CCDC7	ENSG00000216937|ENST00000639629|CCDC7	ENSG00000216937|ENST00000639629|CCDC7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.93853759765625	3	441.938005	1322.79219	-0.1083	-4.7863E-05	4.2281	0.0018686	4.1198	0.0018207	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.76579	1	4889	4889		18.531	1.3643	1	447080			21132	8658	14267	14277	24403	24403					0.1437016559118547
KKKEKEHHK	9	Unmodified	_KKKEKEHHK_					0	0	0			REV__nc|ENSG00000078403|P55197-1|MLLT10	REV__nc|ENSG00000078403|P55197-1|MLLT10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.3535766601562	2	596.351471	1190.68839	0.28036	0.0001672	3.1486	0.0018777	3.429	0.0020449	596.3532384230057	32.741	0.7239	32.868	32.546	33.27	0.12643					46	16	4	0	0	0	0.12688	1	2319	2319		87.696	7.9839	1	1037200	+		21133	16764	14268	14278	24404	24404					0.10067303274172446
KKKEKEHHK	9	Unmodified	_KKKEKEHHK_					0	0	0			REV__nc|ENSG00000078403|P55197-1|MLLT10	REV__nc|ENSG00000078403|P55197-1|MLLT10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3539428710938	2	596.351471	1190.68839	0.66636	0.00039738	3.067	0.001829	3.7334	0.0022264	596.3531027493411	32.676	0.76283	32.887	32.55	33.313	0.21168					43	17	4	0	0	0	0.17181	1	2325	2325		79.713	10.866	1	1154900	+		21134	16764	14268	14278	24405	24405					0.10067303274172446
KKKELLAD	8	Unmodified	_KKKELLAD_					0	0	0			REV__ENSG00000135312|ENST00000369947|HTR1B	REV__ENSG00000135312|ENST00000369947|HTR1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2878112792969	2	472.792392	943.570232	-1.7035	-0.00080542	-4.4588	-0.0021081	-6.1623	-0.0029135	472.79027933841917	97.131	1.8601	97.333	96.964	98.825	0.20207					66	42	2	0	0	0	0.4196	1	9924	9924		21.96	4.5949	1	479160	+		21135	19207	14269	14279	24406	24406					0.09618930965655181
KKKGKGSKP	9	Unmodified	_KKKGKGSKP_					0	0	0			REV__nc|ENSG00000125743|P62316-2|SNRPD2	REV__nc|ENSG00000125743|P62316-2|SNRPD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3127136230469	2	479.313826	956.613099	-0.73483	-0.00035221	0.9249	0.00044332	0.19008	9.1108E-05	479.31418634023333	20.371	0.7595	19.741	19.536	20.295	-0.6296					23	16	2	0	0	0	0.69624	1	636	636		40.778	3.6191	1	248100	+		21136	15708	14270	14280	24407	24407					0.13305745813750036
KKKGKKSSSA	10	Unmodified	_KKKGKKSSSA_					0	0	0		ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.82861328125	2	524.827298	1047.64004	-0.59499	-0.00031227	0.84831	0.00044522	0.25332	0.00013295	524.8275943455435	102.47	0.70876	102.47	102.25	102.96	0					43	17	3	0	0	0	0.8651	1	10457	10457		25.574	3.8717	1	339820			21137	4083	14271	14281	24408	24408					0.11812809634284349
KKKGKKSSSA	10	Unmodified	_KKKGKKSSSA_					0	0	0		ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8251953125	2	524.827298	1047.64004	-0.038995	-2.0466E-05	-0.77095	-0.00040462	-0.80994	-0.00042508	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.86444	1	10859	10859		14.865	0.20078	1	26414000			21138	4083	14271	14281	24409	24409					0.11812809634284349
KKKGKKSSSA	10	Unmodified	_KKKGKKSSSA_					0	0	0		ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8272705078125	2	524.827298	1047.64004	1.2413	0.00065145	-2.1188	-0.001112	-0.87755	-0.00046056	524.8261082044575	99.092	3.5228	99.14	98.41	101.93	0.047852					344	82	7	0	0	0	0.85466	1	10726	10726		20.947	0.4651	1	29910000			21139	4083	14271	14281	24410	24410					0.11812809634284349
KKKGKKSSSA	10	Unmodified	_KKKGKKSSSA_					0	0	0		ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8265991210938	2	524.827298	1047.64004	-0.1321	-6.933E-05	-0.82488	-0.00043292	-0.95698	-0.00050225	524.8267772586088	99.003	3.4379	99.226	98.52	101.96	0.22263					298	81	5	0	0	0	0.82886	3	10313	10241;10313;10640		37.812	12.237	1	31133000			21140	4083	14271	14281	24411;24412;24413	24412					0.11812809634284349
KKKGKKSSSA	10	Unmodified	_KKKGKKSSSA_					0	0	0		ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8270263671875	2	524.827298	1047.64004	0.8139	0.00042716	-1.5792	-0.00082882	-0.76532	-0.00040166	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.86218	1	10256	10256		32.812	10.853	1	27719000			21141	4083	14271	14281	24414	24414					0.11812809634284349
KKKGKKSSSA	10	Unmodified	_KKKGKKSSSA_					0	0	0		ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.8273315429688	2	524.827298	1047.64004	2.0628	0.0010826	-2.0275	-0.0010641	0.03528	1.8516E-05	524.8261063804082	98.875	2.8907	99.236	98.608	101.5	0.36136					212	72	4	0	0	0	0.86718	1	11909	11909		27.882	1.0861	1	10439000			21142	4083	14271	14281	24415	24415					0.11812809634284349
KKKGPKLA	8	Unmodified	_KKKGPKLA_					0	0	0			REV__nc|ENSG00000143486|P41214-2|EIF2D	REV__nc|ENSG00000143486|P41214-2|EIF2D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3001403808594	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82419	2	7919	7919;8076		33.516	14.156	1	5485100	+		21143	19815	14272	14282	24416;24417	24416					0.14627262273347696
KKKGPKLA	8	Unmodified	_KKKGPKLA_					0	0	0			REV__nc|ENSG00000143486|P41214-2|EIF2D	REV__nc|ENSG00000143486|P41214-2|EIF2D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30010986328125	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81724	2	7663	7663;7921		14.664	4.953	1	6323600	+		21144	19815	14272	14282	24418;24419	24418					0.14627262273347696
KKKGQRRE	8	Unmodified	_KKKGQRRE_					0	0	0			REV__ENSG00000166152|ENST00000299191|C16orf78	REV__ENSG00000166152|ENST00000299191|C16orf78	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3161010742188	2	515.317432	1028.62031	0.14223	7.3293E-05	-2.7069	-0.0013949	-2.5647	-0.0013216	515.3158766132427	22.128	0.48729	21.517	21.295	21.782	-0.6107					33	12	4	0	0	0	0.88185	1	872	872		32.812	4.5581	1	280240	+		21145	21257	14273	14283	24420	24420					0.10714478414183759
KKKGVIRR	8	Unmodified	_KKKGVIRR_					0	0	0			REV__ENST00000590377.1_1_18:43328342-43332184:+|nuORF	REV__ENST00000590377.1_1_18:43328342-43332184:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.8528747558594	2	492.843085	983.671617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.51	1	113.51	113.01	114.01	0								0	0	0	0.31173	1	11725	11725		7.6903	0	1		+		21146	29179	14274	14284	24421	24421					0.179128471788772
KKKGVKRKADT	11	Unmodified	_KKKGVKRKADT_					0	0	0		nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-4|BRD2;nc|ENSG00000204256|P25440-3|BRD2;ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000169925|Q15059-2|BRD3;ENSG00000169925|ENST00000303407|BRD3	nc|ENSG00000204256|P25440-2|BRD2	nc|ENSG00000204256|P25440-2|BRD2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	629.8070678710938	2	629.901328	1257.7881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.246	1	16.306	15.806	16.806	0.059269								0	0	0	0.56276	1	125	125		19.104	0.77911	1				21147	15207	14275	14285	24422	24422					0.1695212088811786
KKKHALLLARL	11	Unmodified	_KKKHALLLARL_					0	0	0			REV__nc|ENSG00000111602|Q9UNS1-2|TIMELESS	REV__nc|ENSG00000111602|Q9UNS1-2|TIMELESS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.95928955078125	3	430.962597	1289.86596	-2.0493	-0.00088319	-3.5841	-0.0015446	-5.6335	-0.0024278	430.9609076496411	40.671	0.76293	41.063	40.687	41.45	0.39209					70	21	4	0	0	0	0.76892	2	3476	3466;3476		17.833	9.4259	1	14497000	+		21148	17876	14276	14286	24423;24424	24424					0.23262178544177914
KKKKAILKMF	10	Unmodified	_KKKKAILKMF_					0	0	0		ENST00000336735.8_1_14:81942796-81942856:-|nuORF	ENST00000336735.8_1_14:81942796-81942856:-|nuORF	ENST00000336735.8_1_14:81942796-81942856:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7670593261719	3	412.273783	1233.79952	-0.54767	-0.00022579	-0.61314	-0.00025278	-1.1608	-0.00047857	412.2734408028661	49.465	1.4926	49.372	48.723	50.216	-0.093178					83	35	3	0	0	0	0.37624	1	3758	3758		6.6596	0	1	166390			21149	10175	14277	14287	24425	24425					0.19197226657911415
KKKKAPSASD	10	Unmodified	_KKKKAPSASD_					0	0	0		nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2	nc|ENSG00000167674|Q7Z4V5-2|HDGFL2	nc|ENSG00000167674|Q7Z4V5-2|HDGFL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2921142578125	2	530.31148	1058.60841	-1.5162	-0.00080408	2.2132	0.0011737	0.69698	0.00036961	530.311785564681	92.278	1.2381	92.464	91.7	92.938	0.18582					50	28	3	0	0	0	0.37624	1	9216	9216		31.53	14.165	1	82796			21150	6315	14278	14288	24426	24426					0.08144816880326289
KKKKEEYIKKI	11	Unmodified	_KKKKEEYIKKI_					0	0	0			REV__ENST00000470710.1_1_2:242194755-242195742:-|nuORF	REV__ENST00000470710.1_1_2:242194755-242195742:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.763916015625	3	478.972938	1433.89699	-0.075414	-3.6121E-05	3.414	0.0016352	3.3385	0.0015991	478.9743791690529	50.99	1.1536	51.742	51.366	52.52	0.75174					38	27	2	0	0	0	0.17396	1	5085	5085		45.908	19.158	1	221980	+		21151	18142	14279	14289	24427	24427					0.19739287067727673
KKKKEQGQ	8	Unmodified	_KKKKEQGQ_					0	0	0		ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.29296875	2	487.293091	972.571629	-0.83121	-0.00040504	0.72567	0.00035361	-0.10554	-5.1428E-05	487.2933413180339	21.31	1.5119	21.355	20.763	22.275	0.045399					160	73	4	0	0	0	0.033384	1	565	565		129.68	5.0884	1	2368300			21152	6741	14280	14290	24428	24428					0.08424565054428967
KKKKEQGQ	8	Unmodified	_KKKKEQGQ_					0	0	0		ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.29302978515625	2	487.293091	972.571629	0.071868	3.5021E-05	-0.081666	-3.9795E-05	-0.0097977	-4.7744E-06	487.2929485266333	21.072	1.5372	21.148	20.502	22.039	0.075848					159	76	4	0	0	0	0.00021165	1	570	570		143.11	4.2814	1	2578500			21153	6741	14280	14290	24429	24429					0.08424565054428967
KKKKEQGQ	8	Unmodified	_KKKKEQGQ_					0	0	0		ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	487.293091	972.571629	-1.9785	-0.00096411	2.5902	0.0012622	0.61173	0.00029809	487.2941374618261	21.186	0.5167	21.186	20.966	21.483	0	-0.08904	0.0024188	NaN	143.11	43	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106180			21154	6741	14280	14290							0.08424565054428967
KKKKEQGQ	8	Unmodified	_KKKKEQGQ_					0	0	0		ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	487.293091	972.571629	0.89985	0.00043849	-0.58559	-0.00028535	0.31426	0.00015314	487.2926209927936	21.133	0.54839	21.201	20.957	21.506	0.068251	-0.073861	-0.00067633	NaN	143.11	42	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95389			21155	6741	14280	14290							0.08424565054428967
KKKKEQGQ	8	Unmodified	_KKKKEQGQ_					0	0	0		ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	487.293091	972.571629	-0.27256	-0.00013282	0.45763	0.000223	0.18507	9.0183E-05	487.2931497422975	21.477	0.56264	21.412	21.176	21.739	-0.064743	0.13716	0.00034038	NaN	143.11	43	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128110			21156	6741	14280	14290							0.08424565054428967
KKKKEQGQ	8	Unmodified	_KKKKEQGQ_					0	0	0		ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	ENSG00000172086|ENST00000347055|KRCC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	487.293091	972.571629	-1.2547	-0.00061139	1.5414	0.00075113	0.28677	0.00013974	487.2936046570529	21.467	0.69899	21.403	21.165	21.864	-0.064058	0.12874	0.0013966	NaN	143.11	47	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135290			21157	6741	14280	14290							0.08424565054428967
KKKKERKKE	9	Unmodified	_KKKKERKKE_					0	0	0		L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|26|1|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|26|1|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|26|1|sense	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	601.33837890625	2	601.390596	1200.76664	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.459	1	61.013	60.513	61.513	0.55323								0	0	0	0.29475	1	6433	6433		32.812	6.1195	1				21158	14680	14281	14291	24430	24430					0.17428735859425615
KKKKFGIGFTG	11	Unmodified	_KKKKFGIGFTG_					0	0	0		ENST00000522692.5_1_5:172507621-172513505:+|nuORF	ENST00000522692.5_1_5:172507621-172513505:+|nuORF	ENST00000522692.5_1_5:172507621-172513505:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.8732299804688	2	605.868966	1209.72338	2.1215	0.0012854	3.5656	0.0021603	5.6871	0.0034456	605.870912508801	99.925	1.6378	100.29	99.878	101.52	0.36292					110	40	4	0	0	0	0.7342	1	12171	12171		25.574	1.0549	1	1159400			21159	13191	14282	14292	24431	24431					0.12690546082126275
KKKKGKLC	8	Unmodified	_KKKKGKLC_					0	0	0			REV__AluJb_dup25571|chr3:120598051-120598353:-|1.1485746992925523|0.4818264431357255|1.25|63.0|11|2|sense	REV__AluJb_dup25571|chr3:120598051-120598353:-|1.1485746992925523|0.4818264431357255|1.25|63.0|11|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.74029541015625	2	466.807322	931.600092	0.146	6.8152E-05	1.0744	0.00050152	1.2203	0.00056967	466.8079552593486	54.361	0.7557	54.768	54.277	55.032	0.40663					27	17	2	0	0	0	0.4196	1	5560	5560		13.775	4.953	1	95299	+		21160	15378	14283	14293	24432	24432					0.13155591430006552
KKKKKFGFHM	10	Unmodified	_KKKKKFGFHM_					0	0	0			REV__ENST00000542527.6_1_16:22092304-22092481:+|nuORF	REV__ENST00000542527.6_1_16:22092304-22092481:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.4774169921875	2	639.87881	1277.74307	0.31378	0.00020078	-2.8479	-0.0018223	-2.5342	-0.0016216	639.8771771522163	31.446	0.41898	31.558	31.332	31.751	0.11198					32	20	2	0	0	0	0.86452	1	1440	1440		30.504	9.6665	1	124070	+		21161	28499	14284	14294	24433	24433					0.11530598821241256
KKKKKGCL	8	Unmodified	_KKKKKGCL_					0	0	0			REV__ENST00000444188.1_1_6:169613405-169614351:+|nuORF	REV__ENST00000444188.1_1_6:169613405-169614351:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.8061218261719	2	466.807322	931.600092	-1.9392	-0.00090521	-0.13416	-6.2625E-05	-2.0733	-0.00096784	466.8071062107657	31.294	1.1887	31.294	30.953	32.141	0					86	41	3	0	0	0	0.81724	1	1505	1505		14.664	0	1	152630	+		21162	26784	14285	14295	24434	24434					0.1315559143001792
KKKKKIFRDK	10	Unmodified	_KKKKKIFRDK_					0	0	0		L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|38|2|sense	L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|38|2|sense	L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|38|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2922668457031	3	440.294235	1317.86087	-1.5024	-0.00066148	-2.8775	-0.0012669	-4.3799	-0.0019284	440.2927341441064	57.947	0.93653	58.027	57.61	58.546	0.079643					126	42	4	0	0	0	0.89119	1	4912	4912		10.587	1.375	1	432770			21163	14583	14286	14296	24435	24435					0.21465874681553032
KKKKKKDDD	9	Unmodified	_KKKKKKDDD_					0	0	0		ENSG00000086967|ENST00000357701|MYBPC2	ENSG00000086967|ENST00000357701|MYBPC2	ENSG00000086967|ENST00000357701|MYBPC2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	566.839111328125	2	566.837862	1131.66117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.64	1	100.67	100.17	101.17	0.031036								0	0	0	0.28772	1	10716	10716		35.618	11.099	1				21164	1563	14287	14297	24436	24436					0.10060774943144679
KKKKKKIYKDQ	11	Unmodified	_KKKKKKIYKDQ_					0	0	0			REV__nc|ENSG00000089195|Q9UJA5-2|TRMT6	REV__nc|ENSG00000089195|Q9UJA5-2|TRMT6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9739685058594	3	478.976683	1433.90822	-1.9678	-0.00094254	-3.7618	-0.0018018	-5.7296	-0.0027443	479.30912300096907	43.377	1.5252	43.377	42.724	44.249	0.00016785					100	36	3	0	0	0	0.7896	1	3351	3351		13.508	1.5756	1	374940	+		21165	16965	14288	14298	24437	24437					0.208621091618852
KKKKKKKAA	9	Unmodified	_KKKKKKKAA_					0	0	0			REV__nc|ENSG00000121766|Q9NP64-2|ZCCHC17	REV__nc|ENSG00000121766|Q9NP64-2|ZCCHC17	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.3828125	2	529.382043	1056.74953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.392	1	26.438	25.938	26.938	0.045507								0	0	0	0.3718	1	1114	1114		1.2052	0	1		+		21166	18467	14289	14299	24438	24438					0.22342860044273039
KKKKKKKGPR	10	Unmodified	_KKKKKKKGPR_					0	0	0			REV__chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	REV__chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	409.2912902832031	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.07	1	23.131	22.631	23.631	0.060431								0	0	0	0.45132	1	744	744		6.6596	0.96083	1		+		21167	15512	14290	14300	24439	24439					0.2472131174695278
KKKKKKKGT	9	Unmodified	_KKKKKKKGT_					0	0	0			REV__ENST00000263464.7_1_11:102193472-102193544:+|nuORF	REV__ENST00000263464.7_1_11:102193472-102193544:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	537.8822631835938	2	537.3795	1072.74445	-0.52114	-0.00028005	0.37605	0.00020208	-0.14509	-7.7967E-05	537.3795790811613	108.85	0.39879	108.85	108.68	109.08	0					29	22	2	0	0	0	0.7932	1	11322	11322		7.6903	0	1	550740	+		21168	15559	14291	14301	24440	24440					0.21098556181664208
KKKKKKKGT	9	Unmodified	_KKKKKKKGT_					0	0	0			REV__ENST00000263464.7_1_11:102193472-102193544:+|nuORF	REV__ENST00000263464.7_1_11:102193472-102193544:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	537.3796997070312	2	537.3795	1072.74445	-1.4933	-0.00080247	1.1147	0.000599	-0.37865	-0.00020348	537.379973756811	109.01	0.38526	109.03	108.81	109.19	0.020561					33	19	2	0	0	0	0.7932	1	11640	11640		3.41	0	1	1511300	+		21169	15559	14291	14301	24441	24441					0.21098556181664208
KKKKKKKKLV	10	Unmodified	_KKKKKKKKLV_					0	0	0			REV__ENST00000522197.1_1_8:122652185-122654912:+|nuORF	REV__ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.3168640136719	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.525	1	33.571	33.071	34.071	0.045849								0	0	0	0.45132	1	1633	1633		4.3388	2.4519	1		+		21170	28006	14292	14302	24442	24442					0.3054822610067731
KKKKKKKTG	9	Unmodified	_KKKKKKKTG_					0	0	0		ENST00000373344.9_1_X:76762287-76762440:-|nuORF	ENST00000373344.9_1_X:76762287-76762440:-|nuORF	ENST00000373344.9_1_X:76762287-76762440:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.3780517578125	2	537.3795	1072.74445	3.5358	0.0019001	-3.841	-0.0020641	-0.30518	-0.000164	537.3774099102002	109.05	0.48517	109.03	108.73	109.21	-0.029381					47	18	3	0	0	0	0.7932	1	12092	12092		7.1934	0	1	3929900			21171	10742	14293	14303	24443	24443					0.2109855618164147
KKKKKKKTG	9	Unmodified	_KKKKKKKTG_					0	0	0		ENST00000373344.9_1_X:76762287-76762440:-|nuORF	ENST00000373344.9_1_X:76762287-76762440:-|nuORF	ENST00000373344.9_1_X:76762287-76762440:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.3773193359375	2	537.3795	1072.74445	1.2456	0.00066936	-1.5754	-0.00084657	-0.32977	-0.00017721	537.3785439452816	109.02	0.47247	109.05	108.74	109.22	0.03376					54	22	3	0	0	0	0.7932	3	11962	11962;11970;11978		3.41	0	1	4374000			21172	10742	14293	14303	24444;24445;24446	24444					0.2109855618164147
KKKKKKKTG	9	Unmodified	_KKKKKKKTG_					0	0	0		ENST00000373344.9_1_X:76762287-76762440:-|nuORF	ENST00000373344.9_1_X:76762287-76762440:-|nuORF	ENST00000373344.9_1_X:76762287-76762440:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	537.3775024414062	2	537.3795	1072.74445	0.83904	0.00045088	-1.0981	-0.00059012	-0.2591	-0.00013924	537.3787849959826	109.04	0.43586	109.11	108.82	109.26	0.078552					33	19	2	0	0	0	0.7932	3	11725	11725;11733;11742		16.473	0	1	1594200			21173	10742	14293	14303	24447;24448;24449	24447					0.2109855618164147
KKKKKKLL	8	Unmodified	_KKKKKKLL_					0	0	0			REV__AluSq2_dup64|chr1:1468987-1469304:+|2.991366951907252|0.0058541083686269|9.0|63.0|1|1|sense	REV__AluSq2_dup64|chr1:1468987-1469304:+|2.991366951907252|0.0058541083686269|9.0|63.0|1|1|sense	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.37994384765625	2	507.381512	1012.74847	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.441	1	64.827	64.327	65.327	0.3868								0	0	0	0.30884	1	6963	6963		13.775	0	1		+		21174	15391	14294	14304	24450	24450					0.24260645675360593
KKKKKKSL	8	Unmodified	_KKKKKKSL_					0	0	0		ENSG00000165923|ENST00000525123|AGBL2;nc|ENSG00000165923|Q5U5Z8-2|AGBL2;nc|ENSG00000165923|Q5U5Z8-3|AGBL2	ENSG00000165923|ENST00000525123|AGBL2	ENSG00000165923|ENST00000525123|AGBL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.30072021484375	2	494.355494	986.696435	0.76262	0.00037701	4.3865	0.0021685	5.1491	0.0025455	494.35746604066253	96.964	0.21325	97.127	96.966	97.179	0.16316					5	4	2	0	0	0	0.4196	1	9997	9997		3.9852	0	1	47353			21175	6138	14295	14305	24451	24451					0.2025548226159799
KKKKKKTLRDY	11	Unmodified	_KKKKKKTLRDY_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|4|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|4|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.31011962890625	3	479.308432	1434.90347	-0.6355	-0.0003046	1.7211	0.00082492	1.0856	0.00052032	479.30917580991905	52.514	1.6934	52.49	51.325	53.018	-0.023849					51	40	2	0	0	0	0.77511	1	4650	4650		16.53	0.6092	1	106560			21176	14616	14296	14306	24452	24452					0.2034122501913771
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.315185546875	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.305	1	59.305	58.805	59.805	0								0	0	0	0.45132	1	5155	5155		1.8869	0	1		+		21177	22909	14297	14307	24453	24453					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.3164978027344	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.72	1	114.72	114.22	115.22	0								0	0	0	0.45132	1	11820	11820		0.48304	0	1		+		21178	22909	14297	14307	24454	24454					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.3159484863281	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.94	1	117.94	117.44	118.44	0								0	0	0	0.45132	1	12030	12030		1.8869	1.3592	1		+		21179	22909	14297	14307	24455	24455					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.3157043457031	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.498	1	25.548	25.048	26.048	0.050451								0	0	0	0.45132	1	1017	1017		7.0187	2.9358	1		+		21180	22909	14297	14307	24456	24456					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.3146057128906	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.151	1	59.137	58.637	59.637	-0.013729								0	0	0	0.45132	1	5415	5415		1.8869	0.1306	1		+		21181	22909	14297	14307	24457	24457					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.26922607421875	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.833	1	48.858	48.358	49.358	0.02504								0	0	0	0.45132	1	3742	3742		4.0829	0	1		+		21182	22909	14297	14307	24458	24458					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.3145751953125	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.61	1	113.72	113.22	114.22	0.10217								0	0	0	0.45132	1	12186	12186		0.5277	0	1		+		21183	22909	14297	14307	24459	24459					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.3156433105469	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.63	1	115.73	115.23	116.23	0.094063								0	0	0	0.45132	1	12323	12323		1.8869	1.3592	1		+		21184	22909	14297	14307	24460	24460					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.3170166015625	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.21	1	64.334	63.834	64.834	0.12397								0	0	0	0.45132	1	5657	5657		1.7563	0	1		+		21185	22909	14297	14307	24461	24461					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.3155822753906	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.1	1	113.17	112.67	113.67	0.063232								0	0	0	0.45132	1	12149	12149		1.7563	0	1		+		21186	22909	14297	14307	24462	24462					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.3153991699219	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.44	1	113.5	113	114	0.063232								0	0	0	0.45132	1	12168	12168		1.8869	0	1		+		21187	22909	14297	14307	24463	24463					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__ENSG00000187257|ENST00000334955|RSBN1L	REV__ENSG00000187257|ENST00000334955|RSBN1L	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.3150939941406	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.6	1	117.53	117.03	118.03	-0.064972								0	0	0	0.45132	1	14045	14045		1.8869	0.1306	1		+		21188	22909	14297	14307	24464	24464					0.3054822610070005
KKKKKKVV	8	Unmodified	_KKKKKKVV_					0	0	0		ENSG00000103550|ENST00000219837|KNOP1;ENST00000565844.1_1_16:19721758-19726357:-|nuORF	ENSG00000103550|ENST00000219837|KNOP1	ENSG00000103550|ENST00000219837|KNOP1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.5055236816406	2	493.365862	984.717171	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.375	1	74.421	73.921	74.921	0.04509								0	0	0	0.30125	1	7196	7196		20.482	7.5226	1				21189	2093	14298	14308	24465	24465					0.22420072641273237
KKKKKSKDRK	10	Unmodified	_KKKKKSKDRK_					0	0	0			REV__ENSG00000149136|ENST00000278412|SSRP1	REV__ENSG00000149136|ENST00000278412|SSRP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	425.77496337890625	3	425.285739	1272.83539	-1.3636	-0.00057994	1.303	0.00055417	-0.0606	-2.5772E-05	425.28675850419387	39.71	1.0637	39.666	39.162	40.226	-0.043697					45	24	3	0	0	0	0.37624	1	2840	2840		13.508	0	1	52269	+		21190	20151	14299	14309	24466	24466					0.20988400159126286
KKKKKSKDRK	10	Unmodified	_KKKKKSKDRK_					0	0	0			REV__ENSG00000149136|ENST00000278412|SSRP1	REV__ENSG00000149136|ENST00000278412|SSRP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	425.7748107910156	3	425.285739	1272.83539	0.57262	0.00024353	0.05538	2.3552E-05	0.628	0.00026708	425.2862489566146	39.812	1.7824	39.822	38.58	40.363	0.0092812					56	41	2	0	0	0	0.37624	1	2688	2688		16.007	0.67366	1	38606	+		21191	20151	14299	14309	24467	24467					0.20988400159126286
KKKKKSKDRK	10	Unmodified	_KKKKKSKDRK_					0	0	0			REV__ENSG00000149136|ENST00000278412|SSRP1	REV__ENSG00000149136|ENST00000278412|SSRP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7751159667969	3	425.285739	1272.83539	0.27592	0.00011734	0.15732	6.6907E-05	0.43324	0.00018425	425.28644318080654	37.892	1.2601	38.205	37.329	38.589	0.31312					47	31	3	0	0	0	0.37624	1	3075	3075		14.694	2.7613	1	148290	+		21192	20151	14299	14309	24468	24468					0.20988400159126286
KKKKKSKR	8	Unmodified	_KKKKKSKR_					0	0	0		ENST00000237654.8_1_4:77969082-77969268:-|nuORF	ENST00000237654.8_1_4:77969082-77969268:-|nuORF	ENST00000237654.8_1_4:77969082-77969268:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8287353515625	2	515.864018	1029.71348	0.2088	0.00010771	2.593	0.0013376	2.8018	0.0014453	515.8655626428913	83.044	0.32365	83.517	83.295	83.619	0.47383					13	7	2	0	0	0	0.4196	1	9658	9658		0	0	1	133100			21193	9239	14300	14310	24469	24469					0.19981402867415454
KKKKKVLVWNR	11	Unmodified	_KKKKKVLVWNR_					0	0	0		ENSG00000185056|ENST00000340147|C5orf47	ENSG00000185056|ENST00000340147|C5orf47	ENSG00000185056|ENST00000340147|C5orf47	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.3183898925781	3	476.317151	1425.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.191	1	47.21	46.71	47.71	0.018967								0	0	0	0.56276	1	3515	3515		12.957	6.6366	1				21194	7677	14301	14311	24470	24470					0.23369538981251026
KKKKLRYTKEL	11	Unmodified	_KKKKLRYTKEL_					0	0	0			REV__ENST00000524045.6_1_8:106797143-106799334:-|nuORF	REV__ENST00000524045.6_1_8:106797143-106799334:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3063049316406	3	478.976683	1433.90822	-0.022494	-1.0774E-05	-4.3236	-0.0020709	-4.3461	-0.0020817	478.9744999510038	52.877	2.746	52.874	51.525	54.271	-0.0033035					162	72	3	0	0	0	0.79224	1	4670	4670		12.957	3.7457	1	150480	+		21195	28151	14302	14312	24471	24471					0.208621091618852
KKKKLRYTKEL	11	Unmodified	_KKKKLRYTKEL_					0	0	0			REV__ENST00000524045.6_1_8:106797143-106799334:-|nuORF	REV__ENST00000524045.6_1_8:106797143-106799334:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.973876953125	3	478.976683	1433.90822	-1.3068	-0.00062591	-3.1112	-0.0014902	-4.418	-0.0021161	478.9750986281663	49.151	3.7005	49.151	47.803	51.503	0.00016785					187	96	3	0	0	0	0.79716	1	4410	4410		11.932	2.2862	1	240410	+		21196	28151	14302	14312	24472	24472					0.208621091618852
KKKKLRYTKEL	11	Unmodified	_KKKKLRYTKEL_					0	0	0			REV__ENST00000524045.6_1_8:106797143-106799334:-|nuORF	REV__ENST00000524045.6_1_8:106797143-106799334:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9731140136719	3	478.976683	1433.90822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.355	1	57.389	56.889	57.889	0.03376								0	0	0	0.56276	1	5215	5215		11.455	3.7752	1		+		21197	28151	14302	14312	24473	24473					0.208621091618852
KKKKLRYTKEL	11	Unmodified	_KKKKLRYTKEL_					0	0	0			REV__ENST00000524045.6_1_8:106797143-106799334:-|nuORF	REV__ENST00000524045.6_1_8:106797143-106799334:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9774169921875	3	478.976683	1433.90822	-0.90639	-0.00043414	-3.4897	-0.0016715	-4.3961	-0.0021056	479.3093505928146	47.758	1.3305	47.777	47.26	48.59	0.018967					62	39	2	0	0	0	0.78083	1	3640	3640		15.337	3.8829	1	302610	+		21198	28151	14302	14312	24474	24474					0.208621091618852
KKKKRAKLYK	10	Unmodified	_KKKKRAKLYK_					0	0	0			REV__ENST00000309334.5_2_10:63845597-63850657:+|nuORF	REV__ENST00000309334.5_2_10:63845597-63850657:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.9589538574219	3	430.962597	1289.86596	-2.0493	-0.00088319	-3.5841	-0.0015446	-5.6335	-0.0024278	430.9609076496411	40.671	0.76293	41.063	40.687	41.45	0.39209					70	21	4	0	0	0	0.91405	1	3512	3512		7.0187	0.69781	1	14497000	+		21199	24869	14303	14313	24475	24475					0.23262178544177914
KKKKRFWKSKA	11	Unmodified	_KKKKRFWKSKA_					0	0	0		ENSG00000148300|ENST00000371942|REXO4;ENST00000494045.5_1_9:136278026-136283036:-|nuORF;nc|ENSG00000148300|Q9GZR2-2|REXO4	ENSG00000148300|ENST00000371942|REXO4	ENSG00000148300|ENST00000371942|REXO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9764099121094	3	478.973384	1433.89832	0.0068331	3.2729E-06	2.4216	0.0011599	2.4284	0.0011632	478.9744559828599	50.975	1.3531	50.973	50.261	51.614	-0.0020447					59	37	2	0	0	0	0.79716	1	4403	4403		11.932	1.8285	1	175970			21200	4945	14304	14314	24476	24476					0.19872965947160992
KKKKRFWKSKA	11	Unmodified	_KKKKRFWKSKA_					0	0	0		ENSG00000148300|ENST00000371942|REXO4;ENST00000494045.5_1_9:136278026-136283036:-|nuORF;nc|ENSG00000148300|Q9GZR2-2|REXO4	ENSG00000148300|ENST00000371942|REXO4	ENSG00000148300|ENST00000371942|REXO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9738464355469	3	478.973384	1433.89832	-1.3068	-0.00062591	3.7757	0.0018085	2.469	0.0011826	478.9750986281663	49.151	3.7005	49.151	47.803	51.503	0.00016785					187	96	3	0	0	0	0.80373	1	4207	4207		10.562	4.241	1	240410			21201	4945	14304	14314	24477	24477					0.19872965947160992
KKKKSKDKKR	10	Unmodified	_KKKKSKDKKR_					0	0	0		ENST00000514482.1_1_4:190862182-190882061:+|nuORF;ENSG00000109536|ENST00000226798|FRG1;chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	ENST00000514482.1_1_4:190862182-190882061:+|nuORF	ENST00000514482.1_1_4:190862182-190882061:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	425.77496337890625	3	425.285739	1272.83539	-1.8884	-0.00080312	1.8826	0.00080065	-0.0058222	-2.4761E-06	425.2866246167154	39.563	0.95174	39.563	39.106	40.058	0					36	22	2	0	0	0	0.37624	1	2497	2497		20.837	0	1	73687			21202	2467	14305	14315	24478	24478					0.20988400159126286
KKKKSKDKKR	10	Unmodified	_KKKKSKDKKR_					0	0	0		ENST00000514482.1_1_4:190862182-190882061:+|nuORF;ENSG00000109536|ENST00000226798|FRG1;chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	ENST00000514482.1_1_4:190862182-190882061:+|nuORF	ENST00000514482.1_1_4:190862182-190882061:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.77484130859375	3	425.285739	1272.83539	0.10538	4.4815E-05	-0.17142	-7.2901E-05	-0.066041	-2.8086E-05	425.2858411673838	39.928	0.895	39.898	39.363	40.258	-0.03027					28	21	2	0	0	0	0.37624	1	2755	2755		11.097	0.50996	1	69886			21203	2467	14305	14315	24479	24479					0.20988400159126286
KKKKSKDKKR	10	Unmodified	_KKKKSKDKKR_					0	0	0		ENST00000514482.1_1_4:190862182-190882061:+|nuORF;ENSG00000109536|ENST00000226798|FRG1;chr4:189941296-189943202|39|12.44|0.25|5.62|+|1|None,FRG1|2	ENST00000514482.1_1_4:190862182-190882061:+|nuORF	ENST00000514482.1_1_4:190862182-190882061:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	425.7747802734375	3	425.285739	1272.83539	-1.8053	-0.00076777	1.7872	0.00076007	-0.018113	-7.7033E-06	425.2869233722695	39.95	1.1625	39.957	39.262	40.425	0.0065041					34	29	2	0	0	0	0.37624	1	2394	2394		16.007	0	1	66891			21204	2467	14305	14315	24480	24480					0.20988400159126286
KKKKTESKIYA	11	Unmodified	_KKKKTESKIYA_					0	0	0			REV__ENST00000504771.2_1_5:118690519-118690582:+|nuORF	REV__ENST00000504771.2_1_5:118690519-118690582:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.9392395019531	3	441.938005	1322.79219	-0.1083	-4.7863E-05	4.2281	0.0018686	4.1198	0.0018207	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.74771	1	4923	4923		22.562	3.2989	1	447080	+		21205	27865	14306	14316	24481	24481					0.14370165591208206
KKKKTESKIYA	11	Unmodified	_KKKKTESKIYA_					0	0	0			REV__ENST00000504771.2_1_5:118690519-118690582:+|nuORF	REV__ENST00000504771.2_1_5:118690519-118690582:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2739562988281	3	441.938005	1322.79219	0.33265	0.00014701	3.7218	0.0016448	4.0544	0.0017918	441.9395069624772	55.282	1.2267	55.373	54.736	55.962	0.091167					101	37	4	0	0	0	0.74771	1	4639	4639		22.562	5.8442	1	451030	+		21206	27865	14306	14316	24482	24482					0.14370165591208206
KKKKTSKSKAI	11	Unmodified	_KKKKTSKSKAI_					0	0	0		nc|ENSG00000011426|Q9NQW6-2|ANLN;ENSG00000011426|ENST00000265748|ANLN	nc|ENSG00000011426|Q9NQW6-2|ANLN	nc|ENSG00000011426|Q9NQW6-2|ANLN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.9169311523438	2	623.913904	1245.81326	1.3365	0.00083387	3.0675	0.0019138	4.404	0.0027477	623.9155943953253	109.95	0.81959	110.08	109.65	110.46	0.12289					62	32	3	0	0	0	0.79584	1	11852	11852		12.207	3.9754	1	2359700			21207	792	14307	14317	24483	24483					0.20018175690734097
KKKKVKVK	8	Unmodified	_KKKKVKVK_					0	0	0		ENSG00000149136|ENST00000278412|SSRP1	ENSG00000149136|ENST00000278412|SSRP1	ENSG00000149136|ENST00000278412|SSRP1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.7633056640625	2	493.365862	984.717171	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.425	1	74.425	73.925	74.925	0								0	0	0	0.31173	1	6709	6709		1.619	0	1				21208	5000	14308	14318	24484	24484					0.22420072641273237
KKKKWNRAAPP	11	Unmodified	_KKKKWNRAAPP_					0	0	0			REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.93902587890625	3	441.938451	1322.79352	-0.1083	-4.7863E-05	3.2194	0.0014228	3.1111	0.0013749	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.74405	1	4911	4911		23.378	9.6484	1	447080	+		21209	26652	14309	14319	24485	24485					0.1450384447059605
KKKKWNRAAPP	11	Unmodified	_KKKKWNRAAPP_					0	0	0			REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.9395446777344	3	441.938451	1322.79352	-0.49593	-0.00021917	3.7819	0.0016714	3.286	0.0014522	441.9399207304678	55.239	1.1399	55.213	54.702	55.842	-0.026581					95	31	4	0	0	0	0.76579	1	5020	5020		18.531	2.0012	1	363460	+		21210	26652	14309	14319	24486	24486					0.1450384447059605
KKKKWNRAAPP	11	Unmodified	_KKKKWNRAAPP_					0	0	0			REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2745666503906	3	441.938451	1322.79352	-0.30743	-0.00013586	3.3117	0.0014636	3.0043	0.0013277	441.9398544843468	56.515	1.8945	56.486	55.84	57.735	-0.02866					126	70	3	0	0	0	0.73621	1	5229	5229		25.126	1.7481	1	946810	+		21211	26652	14309	14319	24487	24487					0.1450384447059605
KKKKWNRAAPP	11	Unmodified	_KKKKWNRAAPP_					0	0	0			REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.9393005371094	3	441.938451	1322.79352	0.63201	0.00027931	2.4685	0.0010909	3.1005	0.0013702	441.93938161315157	55.264	1.2271	55.292	54.682	55.909	0.027142					77	31	3	0	0	0	0.70584	2	4982	4957;4982		30.569	6.2929	1	422510	+		21212	26652	14309	14319	24488;24489	24489					0.1450384447059605
KKKKWNRAAPP	11	Unmodified	_KKKKWNRAAPP_					0	0	0			REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9396057128906	3	441.938451	1322.79352	0.34627	0.00015303	2.6233	0.0011594	2.9696	0.0013124	441.9394808074078	56.501	1.1083	56.601	56.467	57.576	0.099186					113	51	3	0	0	0	0.70584	2	4820	4800;4820		30.569	2.1851	1	679940	+		21213	26652	14309	14319	24490;24491	24491					0.1450384447059605
KKKKWNRAAPP	11	Unmodified	_KKKKWNRAAPP_					0	0	0			REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9400329589844	3	441.938451	1322.79352	-0.63554	-0.00028087	3.7441	0.0016547	3.1086	0.0013738	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.74022	1	4637	4637		24.232	4.6049	1	409610	+		21214	26652	14309	14319	24492	24492					0.1450384447059605
KKKKWNRAAPP	11	Unmodified	_KKKKWNRAAPP_					0	0	0			REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.93896484375	3	441.938451	1322.79352	-0.67662	-0.00029902	3.6072	0.0015942	2.9306	0.0012952	441.93996604387434	56.404	1.0058	56.378	55.754	56.759	-0.026108					84	47	2	0	0	0	0.76579	1	4744	4744		18.531	2.0012	1	784320	+		21215	26652	14309	14319	24493	24493					0.1450384447059605
KKKKWNRAAPP	11	Unmodified	_KKKKWNRAAPP_					0	0	0			REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2760009765625	3	441.938451	1322.79352	-0.69974	-0.00030924	3.7657	0.0016642	3.0659	0.001355	441.9399909148648	56.856	0.75961	56.83	56.632	57.391	-0.026108					86	36	3	0	0	0	0.76251	1	4806	4806		19.263	2.0959	1	338630	+		21216	26652	14309	14319	24494	24494					0.1450384447059605
KKKKWNRAAPP	11	Unmodified	_KKKKWNRAAPP_					0	0	0			REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	REV__ENST00000433510.2_1_17:46713876-46724046:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	441.938451	1322.79352	-0.053362	-2.3583E-05	-0.75393	-0.00033319	-0.8073	-0.00035678	442.2718095187919	54.931	0.16668	55.338	55.244	55.411	0.40663	0.065631	-0.0054814	NaN	30.569	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58048	+		21217	26652	14309	14319							0.1450384447059605
KKKLAELHV	9	Unmodified	_KKKLAELHV_					0	0	0			REV__ENST00000523744.2_2_8:17924585-17924894:-|nuORF	REV__ENST00000523744.2_2_8:17924585-17924894:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.3395385742188	2	533.342584	1064.67061	-1.5064	-0.00080343	-2.9287	-0.001562	-4.4351	-0.0023654	533.3409139496441	99.132	2.1048	99.317	98.763	100.87	0.18582					141	48	4	0	0	0	0.7932	1	10322	10322		23.042	3.0457	1	1837700	+		21218	28146	14310	14320	24495	24495					0.1408658801931324
KKKLAHSAKIK	11	Unmodified	_KKKLAHSAKIK_					0	0	0			REV__ENSG00000197380|ENST00000391916|DACT3	REV__ENSG00000197380|ENST00000391916|DACT3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.9472961425781	3	417.946835	1250.81868	-2.1643	-0.00090457	2.506	0.0010474	0.34173	0.00014283	417.94782275235093	15.296	0.20852	15.296	15.194	15.402	0					22	9	3	0	0	0	0.70737	1	17	17		33.039	3.4886	1	182170	+		21219	23225	14311	14321	24496	24496					0.20329899273156116
KKKLAHSAKIK	11	Unmodified	_KKKLAHSAKIK_					0	0	0			REV__ENSG00000197380|ENST00000391916|DACT3	REV__ENSG00000197380|ENST00000391916|DACT3	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	417.946835	1250.81868	-2.1643	-0.00090457	2.506	0.0010474	0.34173	0.00014283	417.94782275235093	15.296	0.20852	15.296	15.194	15.402	0	-0.036761	0.0009643	NaN	33.039	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	182170	+		21220	23225	14311	14321							0.20329899273156116
KKKLAHSAKIK	11	Unmodified	_KKKLAHSAKIK_					0	0	0			REV__ENSG00000197380|ENST00000391916|DACT3	REV__ENSG00000197380|ENST00000391916|DACT3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	417.946835	1250.81868	0.012694	5.3055E-06	0.50493	0.00021103	0.51762	0.00021634	417.94700043364026	15.363	0.1698	15.421	15.35	15.519	0.057872	0.08847	-0.0015448	NaN	33.039	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87966	+		21221	23225	14311	14321							0.20329899273156116
KKKLAHSAKIK	11	Unmodified	_KKKLAHSAKIK_					0	0	0			REV__ENSG00000197380|ENST00000391916|DACT3	REV__ENSG00000197380|ENST00000391916|DACT3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	417.946835	1250.81868	0.49075	0.00020511	0.050525	2.1117E-05	0.54128	0.00022623	417.9467389341825	15.305	0.24026	15.281	15.209	15.45	-0.024207	-0.051709	-0.0021145	NaN	33.039	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92058	+		21222	23225	14311	14321							0.20329899273156116
KKKLAIEMLDP	11	Unmodified	_KKKLAIEMLDP_					0	0	0			REV__ENST00000583108.5_1_17:65733963-65734484:+|nuORF	REV__ENST00000583108.5_1_17:65733963-65734484:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.3792114257812	2	643.381048	1284.74754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.823	1	26.89	26.39	27.39	0.066877								0	0	0	0.56276	1	1040	1040		26.693	6.6961	1		+		21223	18919	14312	14322	24497	24497					0.1165601845348192
KKKLFFFF	8	Unmodified	_KKKLFFFF_					0	0	0			REV__ENST00000318522.9_1_2:42557683-42557836:+|nuORF	REV__ENST00000318522.9_1_2:42557683-42557836:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8333129882812	2	552.833863	1103.65317	-0.71064	-0.00039287	1.3017	0.00071962	0.59106	0.00032676	552.8343973070275	84.083	2.0319	84.083	83.586	85.618	0					122	47	3	0	0	0	0.884	1	8011	8011		33.516	5.6333	1	300740	+		21224	24975	14313	14323	24498	24498					0.10549292484324724
KKKLIPKLRPG	11	Unmodified	_KKKLIPKLRPG_					0	0	0			REV__chr11:107455776-107457724|20|16.35|0.01|10.46|-|1|CWF19L2,None|1	REV__chr11:107455776-107457724|20|16.35|0.01|10.46|-|1|CWF19L2,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.630859375	3	426.630847	1276.87071	0.26623	0.00011358	-0.21445	-9.1493E-05	0.051778	2.209E-05	426.63069253685165	82.218	1.0571	82.692	82.278	83.335	0.47383					49	25	2	0	0	0	0.80813	1	9547	9547		9.6461	0.43434	1	1701000	+		21225	15484	14314	14324	24499	24499					0.24335062686918718
KKKLKAFKCA	10	Unmodified	_KKKLKAFKCA_					0	0	0			REV__ENST00000547505.2_1_12:44054544-44054901:+|nuORF	REV__ENST00000547505.2_1_12:44054544-44054901:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8690795898438	2	582.867911	1163.72127	3.1888	0.0018587	-1.9156	-0.0011165	1.2733	0.00074216	582.8668381278478	102.4	0.90347	102.35	101.97	102.87	-0.047005					54	21	4	0	0	0	0.85251	1	11167	11167		19.997	0	1	278730	+		21226	28551	14315	14325	24500	24500					0.14595794072693025
KKKLKAFKCA	10	Unmodified	_KKKLKAFKCA_					0	0	0			REV__ENST00000547505.2_1_12:44054544-44054901:+|nuORF	REV__ENST00000547505.2_1_12:44054544-44054901:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	582.867911	1163.72127	-0.82941	-0.00048344	2.5229	0.0014705	1.6935	0.00098708	582.8692823363587	102.46	0.77078	102.48	102.16	102.93	0.01989	0.087096	0.0028035	NaN	19.997	36	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	195100	+		21227	28551	14315	14325							0.14595794072693025
KKKLKAFKCA	10	Unmodified	_KKKLKAFKCA_					0	0	0			REV__ENST00000547505.2_1_12:44054544-44054901:+|nuORF	REV__ENST00000547505.2_1_12:44054544-44054901:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	582.867911	1163.72127	3.1888	0.0018587	-1.9156	-0.0011165	1.2733	0.00074216	582.8668381278478	102.4	0.90347	102.35	101.97	102.87	-0.047005	-0.04204	-0.0023706	NaN	19.997	54	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	278730	+		21228	28551	14315	14325							0.14595794072693025
KKKLLKKYL	9	Unmodified	_KKKLLKKYL_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	581.4017333984375	2	581.407727	1160.8009	-1.3499	-0.00078484	-2.0358	-0.0011836	-3.3857	-0.0019685	581.4064330770331	108.95	0.5045	108.97	108.69	109.19	0.020561					51	25	3	0	0	0	0.7932	1	11636	11636		4.3163	0.33103	1	1616400	+		21229	20128	14316	14326	24501	24501					0.22693184018339707
KKKLSKKMKR	10	Unmodified	_KKKLSKKMKR_					0	0	0			REV__chr15:68780142-68780413|24|26.04|0.41|5.98|-|0|ANP32A,None|2	REV__chr15:68780142-68780413|24|26.04|0.41|5.98|-|0|ANP32A,None|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.77520751953125	3	425.619953	1273.83803	0.34266	0.00014584	-0.52173	-0.00022206	-0.17907	-7.6215E-05	425.6196036352472	37.708	0.53313	38.194	38.063	38.597	0.48581					14	13	2	0	0	0	0.37624	1	3081	3081		15.333	9.6343	1	94128	+		21230	15622	14317	14327	24502	24502					0.21206532292421798
KKKLVCFKK	9	Unmodified	_KKKLVCFKK_					0	0	0			REV__ENSG00000148513|ENST00000361713|ANKRD30A	REV__ENSG00000148513|ENST00000361713|ANKRD30A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.8654174804688	2	561.365004	1120.71546	-0.90534	-0.00050823	-1.2125	-0.00068064	-2.1178	-0.0011889	561.3641911256115	45.987	0.8561	45.968	45.577	46.433	-0.018581					49	20	3	0	0	0	0.7932	1	3710	3710		23.042	1.0826	1	139730	+		21231	20121	14318	14328	24503	24503					0.15992695560998982
KKKMRTVVF	9	Unmodified	_KKKMRTVVF_					0	0	0			REV__ENST00000428643.1_1_9:131425437-131425533:-|nuORF	REV__ENST00000428643.1_1_9:131425437-131425533:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8545532226562	2	568.852261	1135.68997	-0.36185	-0.00020584	2.1364	0.0012153	1.7746	0.0010095	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.77546	1	10707	10707		31.955	7.4357	1	34546000	+		21232	26584	14319	14329	24504	24504					0.12755221038560194
KKKMRTVVF	9	Unmodified	_KKKMRTVVF_					0	0	0			REV__ENST00000428643.1_1_9:131425437-131425533:-|nuORF	REV__ENST00000428643.1_1_9:131425437-131425533:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8536376953125	2	568.852261	1135.68997	0.87008	0.00049495	0.54687	0.00031109	1.417	0.00080604	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.7932	1	11033	11033		25.45	0	1	78933000	+		21233	26584	14319	14329	24505	24505					0.12755221038560194
KKKNHTIQH	9	Unmodified	_KKKNHTIQH_					0	0	0			REV__nc|ENSG00000184617|A6NDX5|ZNF840P	REV__nc|ENSG00000184617|A6NDX5|ZNF840P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3310546875	2	567.330539	1132.64652	-1.3957	-0.00079181	0.07479	4.2431E-05	-1.3209	-0.00074938	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.67345	1	9822	9822		42.396	0	1	17338000	+		21234	30094	14320	14330	24506	24506					0.0855074758567298
KKKNIKTKL	9	Unmodified	_KKKNIKTKL_					0	0	0		L1M5_dup25852|chr8:27806947-27807562:-|1.0541310341095722|0.0589088323365446|4.16|63.0|2|1|sense	L1M5_dup25852|chr8:27806947-27807562:-|1.0541310341095722|0.0589088323365446|4.16|63.0|2|1|sense	L1M5_dup25852|chr8:27806947-27807562:-|1.0541310341095722|0.0589088323365446|4.16|63.0|2|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.8778686523438	2	550.879333	1099.74411	1.2771	0.00070354	-1.3833	-0.00076203	-0.10617	-5.8487E-05	550.8784430359498	108.9	0.52892	108.94	108.73	109.25	0.034355					60	25	3	0	0	0	0.7932	1	11957	11957		8.2313	0.54101	1	2842700			21235	14527	14321	14331	24507	24507					0.19823136461786817
KKKNIMRPHK	10	Unmodified	_KKKNIMRPHK_					0	0	0			REV__SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|41|3|sense	REV__SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|41|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3919067382812	2	640.392616	1278.77068	0.18689	0.00011969	0.18511	0.00011854	0.372	0.00023823	640.3926444536196	51.078	1.0383	51.513	50.994	52.033	0.43505					62	24	3	0	0	0	0.85694	1	5043	5043		21.96	1.9631	1	1259400	+		21236	15534	14322	14332	24508	24508					0.14244502081464816
KKKPRRGRKPK	11	Unmodified	_KKKPRRGRKPK_					0	0	0		nc|ENSG00000141956|P57071|PRDM15;nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15	nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071|PRDM15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.3106689453125	3	460.312511	1377.9157	-1.5682	-0.00072186	-3.2717	-0.001506	-4.8399	-0.0022279	460.3109022015977	40.379	0.79731	40.968	40.515	41.312	0.58915					59	21	3	0	0	0	0.79716	3	3465	3441;3453;3465		11.932	6.2336	1	6461400			21237	14967	14323	14333	24509;24510;24511	24511					0.2418630627280436
KKKPTQQSD	9	Unmodified	_KKKPTQQSD_					0	0	0		L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|122|2|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|122|2|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|122|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2933959960938	2	530.293288	1058.57202	-0.034361	-1.8221E-05	0.31371	0.00016636	0.27935	0.00014814	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.71772	1	9330	9330		39.253	3.6345	1	1852900			21238	14566	14324	14334	24512	24512					0.04507939983614051
KKKPTQQSD	9	Unmodified	_KKKPTQQSD_					0	0	0		L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|122|2|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|122|2|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|122|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2930297851562	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.77244	1	9523	9523		32.812	1.2826	1	1864800			21239	14566	14324	14334	24513	24513					0.04507939983614051
KKKRFLFWYTL	11	Unmodified	_KKKRFLFWYTL_					0	0	0			REV__ENSG00000127948|ENST00000461988|POR	REV__ENSG00000127948|ENST00000461988|POR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	510.96929931640625	3	510.63789	1528.89184	-0.66076	-0.00033741	-3.8962	-0.0019895	-4.5569	-0.0023269	510.63450150479764	105.06	2.1188	105.06	104.28	106.4	0					172	50	6	0	0	0	0.78683	1	10733	10733		14.086	3.9821	1	638450	+		21240	18754	14325	14335	24514	24514					0.14855027995827186
KKKRKKLEYTI	11	Unmodified	_KKKRKKLEYTI_					0	0	0		nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA;ENSG00000174197|ENST00000703841|MGA	nc|ENSG00000174197|Q8IWI9-3|MGA	nc|ENSG00000174197|Q8IWI9-3|MGA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3087158203125	3	478.976683	1433.90822	-0.20548	-9.8418E-05	-4.3748	-0.0020954	-4.5803	-0.0021939	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.79224	2	3546	3443;3546		12.957	4.9231	1	468190			21241	6914	14326	14336	24515;24516	24516					0.208621091618852
KKKRKKTQKKF	11	Unmodified	_KKKRKKTQKKF_					0	0	0		ENSG00000148296|ENST00000372022|SURF6	ENSG00000148296|ENST00000372022|SURF6	ENSG00000148296|ENST00000372022|SURF6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7286071777344	3	483.324305	1446.95109	0.01829	8.8402E-06	-0.38565	-0.00018639	-0.36736	-0.00017755	483.3240697339453	75.116	1.3666	75.511	74.71	76.077	0.39507					48	32	2	0	0	0	0.18238	1	8388	8388		9.2118	7.793	1	165800			21242	4943	14327	14337	24517	24517					0.2454892400994595
KKKRKKTQKKF	11	Unmodified	_KKKRKKTQKKF_					0	0	0		ENSG00000148296|ENST00000372022|SURF6	ENSG00000148296|ENST00000372022|SURF6	ENSG00000148296|ENST00000372022|SURF6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	483.324305	1446.95109	-0.79254	-0.00038305	0.12716	6.1459E-05	-0.66538	-0.00032159	483.3242096281113	75.111	0.94865	75.236	74.726	75.674	0.12545	-0.12749	0.00031147	NaN	9.2118	39	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90062			21243	4943	14327	14337							0.2454892400994595
KKKRKKTQKKF	11	Unmodified	_KKKRKKTQKKF_					0	0	0		ENSG00000148296|ENST00000372022|SURF6	ENSG00000148296|ENST00000372022|SURF6	ENSG00000148296|ENST00000372022|SURF6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	483.324305	1446.95109	0.55558	0.00026852	-1.1927	-0.00057647	-0.63713	-0.00030794	483.3237429697117	75.214	0.82914	75.346	74.93	75.76	0.13208	-0.01833	-0.0016023	NaN	9.2118	41	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79201			21244	4943	14327	14337							0.2454892400994595
KKKRKKTQKKF	11	Unmodified	_KKKRKKTQKKF_					0	0	0		ENSG00000148296|ENST00000372022|SURF6	ENSG00000148296|ENST00000372022|SURF6	ENSG00000148296|ENST00000372022|SURF6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	483.324305	1446.95109	-1.2175	-0.00058845	0.75698	0.00036587	-0.46053	-0.00022259	483.3246315565012	75.324	0.94242	75.411	74.796	75.739	0.087631	0.047454	0.0012247	NaN	9.2118	38	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81209			21245	4943	14327	14337							0.2454892400994595
KKKRKTKI	8	Unmodified	_KKKRKTKI_					0	0	0		L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|70|2|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|70|2|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|70|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	515.3648681640625	2	515.366393	1028.71823	0.81757	0.00042135	-0.46421	-0.00023924	0.35335	0.00018211	515.3661768227523	109.06	0.33616	109.14	108.9	109.24	0.078552					20	14	2	0	0	0	0.86906	1	11738	11738		8.2313	0	1	1615900			21246	14551	14328	14338	24518	24518					0.20502287010162945
KKKRPMSQIS	10	Unmodified	_KKKRPMSQIS_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D	nc|ENSG00000113448|Q08499-5|PDE4D	nc|ENSG00000113448|Q08499-5|PDE4D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.8585205078125	2	601.855532	1201.69651	-0.51505	-0.00030999	4.0494	0.0024371	3.5343	0.0021271	601.8578575542072	103.62	2.2032	103.62	103.26	105.47	-0.0035706					116	52	4	0	0	0	0.8651	1	11118	11118		25.574	1.0549	1	1418100			21247	449	14329	14339	24519	24519					0.10373114199319389
KKKRPMSQIS	10	Unmodified	_KKKRPMSQIS_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D	nc|ENSG00000113448|Q08499-5|PDE4D	nc|ENSG00000113448|Q08499-5|PDE4D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.8590698242188	2	601.855532	1201.69651	3.2383	0.001949	0.2335	0.00014054	3.4718	0.0020895	601.8555799865445	103.53	2.0205	103.49	103.12	105.14	-0.043755					118	48	4	0	0	0	0.86763	2	11357	11357;11441		26.693	3.6504	1	1395200			21248	449	14329	14339	24520;24521	24520					0.10373114199319389
KKKRPMSQIS	10	Unmodified	_KKKRPMSQIS_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D	nc|ENSG00000113448|Q08499-5|PDE4D	nc|ENSG00000113448|Q08499-5|PDE4D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.8592529296875	2	601.855532	1201.69651	-0.24099	-0.00014504	3.8407	0.0023115	3.5997	0.0021665	601.8577844533773	103.4	2.3202	103.45	103.07	105.39	0.041481					122	55	4	0	0	0	0.85934	1	11331	11331		35.618	1.4457	1	1412200			21249	449	14329	14339	24522	24522					0.10373114199319389
KKKRPMSQIS	10	Unmodified	_KKKRPMSQIS_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D	nc|ENSG00000113448|Q08499-5|PDE4D	nc|ENSG00000113448|Q08499-5|PDE4D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.8587036132812	2	601.855532	1201.69651	1.0107	0.00060827	2.6149	0.0015738	3.6255	0.002182	601.8569689467788	103.23	2.1882	103.41	103.08	105.27	0.18297					123	54	4	0	0	0	0.86348	1	10971	10971		31.53	3.4483	1	2928900			21250	449	14329	14339	24523	24523					0.10373114199319389
KKKRPMSQIS	10	Unmodified	_KKKRPMSQIS_					0	0	0		nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;chr5:58993465-58999489|32|10.69|0.46|4.53|-|ENST00000317118|PDE4D,PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;ENSG00000113448|ENST00000340635|PDE4D	nc|ENSG00000113448|Q08499-5|PDE4D	nc|ENSG00000113448|Q08499-5|PDE4D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	601.8579711914062	2	601.855532	1201.69651	0.90226	0.00054303	2.8277	0.0017019	3.73	0.0022449	601.8571228928912	103.35	2.581	103.48	103.09	105.68	0.12622					132	64	4	0	0	0	0.8651	2	11036	11006;11036		27.882	2.3082	1	2471100			21251	449	14329	14339	24524;24525	24525					0.10373114199319389
KKKRRRPRKVE	11	Unmodified	_KKKRRRPRKVE_					0	0	0			REV__chr2:43132480-43137613|16|13.5|0.0|20.36|-|2|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|4	REV__chr2:43132480-43137613|16|13.5|0.0|20.36|-|2|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3263854980469	3	494.32682	1479.95863	0.75213	0.0003718	0.93126	0.00046035	1.6834	0.00083214	494.32727971408536	15.362	0.29456	15.337	15.23	15.524	-0.024207					22	9	3	0	0	0	0.76892	2	19	19;33		17.833	8.187	1	451070	+		21252	15761	14330	14340	24526;24527	24526					0.2378507633022764
KKKRRRPRKVE	11	Unmodified	_KKKRRRPRKVE_					0	0	0			REV__chr2:43132480-43137613|16|13.5|0.0|20.36|-|2|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|4	REV__chr2:43132480-43137613|16|13.5|0.0|20.36|-|2|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|4	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	494.32682	1479.95863	-1.9502	-0.00096403	3.317	0.0016397	1.3668	0.00067565	494.3284115501964	15.4	0.16568	15.4	15.294	15.46	0	-0.022986	0.002012	NaN	17.833	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59340	+		21253	15761	14330	14340							0.2378507633022764
KKKRRRPRKVE	11	Unmodified	_KKKRRRPRKVE_					0	0	0			REV__chr2:43132480-43137613|16|13.5|0.0|20.36|-|2|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|4	REV__chr2:43132480-43137613|16|13.5|0.0|20.36|-|2|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	494.32682	1479.95863	-0.2722	-0.00013456	2.0749	0.0010257	1.8027	0.00089113	494.3278933673598	15.552	0.11148	15.472	15.381	15.493	-0.080017	0.048814	0.00017005	NaN	17.833	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23224	+		21254	15761	14330	14340							0.2378507633022764
KKKTLIIQS	9	Unmodified	_KKKTLIIQS_					0	0	0		L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|7|1|sense	L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|7|1|sense	L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|7|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7788696289062	2	529.850242	1057.68593	0.58966	0.00031243	-2.6497	-0.001404	-2.0601	-0.0010915	530.3484578335887	56.934	0.63026	57.489	57.136	57.766	0.55512					33	14	3	0	0	0	0.20789	1	5892	5892		26.693	0	1	346550			21255	14538	14331	14341	24528	24528					0.15939454816520993
KKKTRVYHRQW	11	Unmodified	_KKKTRVYHRQW_					0	0	0		ENST00000586052.5_1_17:76435259-76454697:-|nuORF	ENST00000586052.5_1_17:76435259-76454697:-|nuORF	ENST00000586052.5_1_17:76435259-76454697:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.6328430175781	3	510.631909	1528.8739	1.9809	0.0010115	3.5247	0.0017998	5.5056	0.0028114	510.63303476762127	104.3	2.045	104.49	103.76	105.81	0.18887					109	51	3	0	0	0	0.81021	1	12633	12633		9.2118	0.41249	1	329880			21256	14155	14332	14342	24529	24529					0.1306170579364334
KKKTSRAKKAK	11	Unmodified	_KKKTSRAKKAK_					0	0	0			REV__ENSG00000171608|ENST00000377346|PIK3CD	REV__ENSG00000171608|ENST00000377346|PIK3CD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	424.3064270019531	3	425.285739	1272.83539	0.21321	9.0676E-05	0.29071	0.00012364	0.50392	0.00021431	425.28621455743564	42.95	1.1423	43.015	42.462	43.604	0.065037					37	29	2	0	0	0	0.17925	1	2870	2870		12.957	11.201	1	72629	+		21257	21756	14333	14343	24530	24530					0.20988400159126286
KKKTSRAKKAK	11	Unmodified	_KKKTSRAKKAK_					0	0	0			REV__ENSG00000171608|ENST00000377346|PIK3CD	REV__ENSG00000171608|ENST00000377346|PIK3CD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.7748107910156	3	425.285739	1272.83539	-0.14026	-5.9649E-05	-0.23424	-9.9617E-05	-0.37449	-0.00015927	425.28577853285407	39.613	0.84494	39.565	39.165	40.01	-0.04789					30	21	2	0	0	0	0.17779	1	2387	2387		8.0344	0	1	55968	+		21258	21756	14333	14343	24531	24531					0.20988400159126286
KKKTSRAKKAK	11	Unmodified	_KKKTSRAKKAK_					0	0	0			REV__ENSG00000171608|ENST00000377346|PIK3CD	REV__ENSG00000171608|ENST00000377346|PIK3CD	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	425.285739	1272.83539	-1.8365	-0.00078102	2.1702	0.00092296	0.33377	0.00014195	425.28694981527485	43.252	0.8201	43.252	42.605	43.425	0	0.095634	0.0015775	NaN	12.957	25	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43744	+		21259	21756	14333	14343							0.20988400159126286
KKKTSRAKKAK	11	Unmodified	_KKKTSRAKKAK_					0	0	0			REV__ENSG00000171608|ENST00000377346|PIK3CD	REV__ENSG00000171608|ENST00000377346|PIK3CD	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	425.285739	1272.83539	0.19609	8.3394E-05	0.54264	0.00023078	0.73873	0.00031417	425.28654536506514	43.228	1.9367	43.201	41.954	43.891	-0.026764	0.045264	-0.00049902	NaN	12.957	57	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72414	+		21260	21756	14333	14343							0.20988400159126286
KKKTVDVKINH	11	Unmodified	_KKKTVDVKINH_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF	nc|ENSG00000173193|Q460N5-4|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2679138183594	3	437.269866	1308.78777	-1.7231	-0.00075344	-2.8954	-0.0012661	-4.6185	-0.0020195	437.26850375985913	50.916	1.5264	50.916	50.06	51.586	0					171	39	5	0	0	0	0.75457	1	4102	4102		21.032	2.5012	1	3001200			21261	6838;12327	14334	14344	24532	24532					0.1457270116827658
KKKTVDVKINH	11	Unmodified	_KKKTVDVKINH_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF	nc|ENSG00000173193|Q460N5-4|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26800537109375	3	437.269866	1308.78777	-1.575	-0.00068869	-2.9633	-0.0012958	-4.5383	-0.0019845	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.70847	2	4037	3967;4037		30.139	4.0758	1	3429700			21262	6838;12327	14334	14344	24533;24534	24534					0.1457270116827658
KKKVFFSKLA	10	Unmodified	_KKKVFFSKLA_					0	0	0			REV__ENSG00000250423|ENST00000691062|KIAA1210	REV__ENSG00000250423|ENST00000691062|KIAA1210	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	598.8780517578125	2	598.381709	1194.74886	0.84734	0.00050703	-0.95155	-0.00056939	-0.10421	-6.236E-05	598.3810873389388	40.888	1.2283	40.892	40.311	41.539	0.0043983					77	44	2	0	0	0	0.85981	1	2652	2652		35.152	2.3396	1	407900	+		21263	15944	14335	14345	24535	24535					0.159280206045878
KKKVFKNFI	9	Unmodified	_KKKVFKNFI_					0	0	0		ENST00000269214.9_1_18:19155190-19155674:-|nuORF	ENST00000269214.9_1_18:19155190-19155674:-|nuORF	ENST00000269214.9_1_18:19155190-19155674:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3697509765625	2	576.368601	1150.72265	-0.38703	-0.00022307	1.819	0.0010484	1.432	0.00082536	576.369487649421	37.688	1.7157	38.174	37.83	39.546	0.48581					111	42	4	0	0	0	0.78058	1	3052	3052		30.504	0	1	1850300			21264	9546	14336	14346	24536	24536					0.15331751433086538
KKKVGRYF	8	Unmodified	_KKKVGRYF_					0	0	0			REV__ENSG00000047365|ENST00000303965|ARAP2	REV__ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3206176757812	2	513.316369	1024.61818	-0.56742	-0.00029127	1.1983	0.00061511	0.63088	0.00032384	513.8184352321304	55.37	1.1164	55.4	54.998	56.114	0.030838					47	27	2	0	0	0	0.86288	1	5031	5031		26.796	3.7536	1	233220	+		21265	16351	14337	14347	24537	24537					0.10686049676360199
KKKVKLSKEH	10	Unmodified	_KKKVKLSKEH_					0	0	0		ENSG00000162607|ENST00000339950|USP1	ENSG00000162607|ENST00000339950|USP1	ENSG00000162607|ENST00000339950|USP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	409.29205322265625	3	408.931073	1223.77139	-1.3458	-0.00055036	3.4169	0.0013973	2.0711	0.00084692	408.9319376525689	71.705	0.10118	71.781	71.732	71.833	0.076225					5	3	2	0	0	0	0.37624	1	6520	6520		25.126	12.919	1	34179			21266	5704	14338	14348	24538	24538					0.1684562000218648
KKKVPILIL	9	Unmodified	_KKKVPILIL_					0	0	0		ENST00000257287.4_1_4:56819306-56819372:+|nuORF	ENST00000257287.4_1_4:56819306-56819372:+|nuORF	ENST00000257287.4_1_4:56819306-56819372:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.361083984375	2	526.38372	1050.75289	-0.91724	-0.00048282	1.097	0.00057744	0.17974	9.4614E-05	526.8844139044094	37.116	0.13348	37.127	37.062	37.195	0.011173					4	2	2	0	0	0	0.20789	1	2461	2461		7.6903	0	1	19267			21267	9351	14339	14349	24539	24539					0.22954110098271485
KKKVRLWIFFK	11	Unmodified	_KKKVRLWIFFK_					0	0	0			REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.6568908691406	3	498.322013	1491.94421	-1.486	-0.00074053	1.1969	0.00059646	-0.28911	-0.00014407	498.3225144803097	50.947	1.1661	50.947	50.576	51.742	0					63	30	3	0	0	0	0.8498	1	4097	4097		6.001	2.5923	1	270970	+		21268	25831	14340	14350	24540	24540					0.21791611129378907
KKKVRLWIFFK	11	Unmodified	_KKKVRLWIFFK_					0	0	0			REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.65625	3	498.322013	1491.94421	0.083106	4.1414E-05	-0.071611	-3.5685E-05	0.011495	5.7284E-06	498.32192512329175	49.294	1.871	49.291	48.477	50.348	-0.0030365					99	43	4	0	0	0	0.80593	1	4196	4196		10.104	3.783	1	173550	+		21269	25831	14340	14350	24541	24541					0.21791611129378907
KKKVRLWIFFK	11	Unmodified	_KKKVRLWIFFK_					0	0	0			REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.3218078613281	3	498.322013	1491.94421	-0.61887	-0.0003084	0.64399	0.00032091	0.025115	1.2515E-05	498.32226194102617	47.891	1.1012	47.913	47.572	48.674	0.02227					70	32	3	0	0	0	0.85439	1	3629	3629		5.6988	0	1	262780	+		21270	25831	14340	14350	24542	24542					0.21791611129378907
KKKVRLWIFFK	11	Unmodified	_KKKVRLWIFFK_					0	0	0			REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.65594482421875	3	498.322013	1491.94421	-0.61388	-0.00030591	0.63504	0.00031646	0.021168	1.0548E-05	498.32217932763825	50.906	1.1069	50.941	50.404	51.511	0.034584					72	33	3	0	0	0	0.88916	1	4047	4047		3.4087	0	1	279180	+		21271	25831	14340	14350	24543	24543					0.21791611129378907
KKKVRLWIFFK	11	Unmodified	_KKKVRLWIFFK_					0	0	0			REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.3217468261719	3	498.322013	1491.94421	0.34098	0.00016992	-0.75302	-0.00037525	-0.41204	-0.00020533	498.3215489235199	49.794	1.8345	49.837	48.67	50.505	0.04224					99	45	3	0	0	0	0.7896	1	3907	3907		13.508	3.8618	1	194850	+		21272	25831	14340	14350	24544	24544					0.21791611129378907
KKKVRLWIFFK	11	Unmodified	_KKKVRLWIFFK_					0	0	0			REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.8436584472656	3	498.322013	1491.94421	-0.90123	-0.00044911	0.5439	0.00027104	-0.35734	-0.00017807	498.65663856653333	46.957	1.8329	47.88	47.476	49.309	0.92315					81	44	2	0	0	0	0.18216	1	4570	4570		14.086	8.085	1	916780	+		21273	25831	14340	14350	24545	24545					0.21791611129378907
KKKVVDVLK	9	Unmodified	_KKKVVDVLK_					0	0	0			REV__ENSG00000131747|ENST00000423485|TOP2A	REV__ENSG00000131747|ENST00000423485|TOP2A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.8599243164062	2	528.860609	1055.70667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.43	1	115.36	114.86	115.86	-0.072342								0	0	0	0.34932	1	12449	12449		14.865	3.3539	1		+		21274	18961	14341	14351	24546	24546					0.18104045196173502
KKKYLRFQLIR	11	Unmodified	_KKKYLRFQLIR_					0	0	0			REV__ENSG00000184156|ENST00000388996|KCNQ3	REV__ENSG00000184156|ENST00000388996|KCNQ3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.6554870605469	3	498.320672	1491.94019	-0.62261	-0.00031026	3.3055	0.0016472	2.6829	0.0013369	498.65666622308714	50.856	0.89754	50.832	50.34	51.238	-0.02343					63	27	3	0	0	0	0.181	1	4401	4401		3.026	0	1	282310	+		21275	22647	14342	14352	24547	24547					0.21389521635683195
KKKYLRFQLIR	11	Unmodified	_KKKYLRFQLIR_					0	0	0			REV__ENSG00000184156|ENST00000388996|KCNQ3	REV__ENSG00000184156|ENST00000388996|KCNQ3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.3221130371094	3	498.320672	1491.94019	-0.30203	-0.00015051	2.9552	0.0014726	2.6532	0.0013221	498.3219797483675	50.891	1.0872	50.799	50.377	51.464	-0.091793					78	30	4	0	0	0	0.78683	1	4026	4026		14.086	0.57807	1	376330	+		21276	22647	14342	14352	24548	24548					0.21389521635683195
KKKYQKRMKIK	11	Unmodified	_KKKYQKRMKIK_					0	0	0		ENSG00000124383|ENST00000244230|MPHOSPH10	ENSG00000124383|ENST00000244230|MPHOSPH10	ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.64947509765625	3	493.649913	1477.92791	-1.6053	-0.00079248	0.8659	0.00042745	-0.73944	-0.00036502	493.6501931782481	44.56	1.836	44.56	43.623	45.459	0					138	44	4	0	0	0	0.85439	1	3236	3236		5.6988	2.2901	1	434870			21277	3331	14343	14353	24549	24549					0.20806161900986808
KKKYRHFQ	8	Unmodified	_KKKYRHFQ_					0	0	0		nc|ENSG00000129219|O14939-3|PLD2;nc|ENSG00000129219|O14939-4|PLD2;ENSG00000129219|ENST00000263088|PLD2	nc|ENSG00000129219|O14939-3|PLD2	nc|ENSG00000129219|O14939-3|PLD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3297119140625	2	567.830175	1133.6458	0.82187	0.00046668	1.2911	0.00073315	2.113	0.0011998	567.8309774603865	95.236	2.3912	95.399	95.071	97.462	0.16307					104	56	3	0	0	0	0.4196	1	9839	9839		35.201	28.007	1	467030			21278	3578	14344	14354	24550	24550					0.08431952936598464
KKLAKMQLHG	10	Unmodified	_KKLAKMQLHG_					0	0	0		ENSG00000154727|ENST00000400075|GABPA	ENSG00000154727|ENST00000400075|GABPA	ENSG00000154727|ENST00000400075|GABPA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3661499023438	2	577.347343	1152.68013	0.6458	0.00037285	1.0723	0.00061911	1.7181	0.00099195	577.3487225210956	101.92	0.27916	102.12	101.97	102.25	0.19484					9	6	2	0	0	0	0.37624	1	10729	10729		37.159	18.835	1	92542			21279	5290	14345	14355	24551	24551					0.10990033033203872
KKLAKQPSPL	10	Unmodified	_KKLAKQPSPL_					0	0	0		ENSG00000069020|ENST00000403625|MAST4;nc|ENSG00000069020|O15021-2|MAST4;nc|ENSG00000069020|O15021-3|MAST4;nc|ENSG00000069020|O15021-6|MAST4	ENSG00000069020|ENST00000403625|MAST4	ENSG00000069020|ENST00000403625|MAST4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.3531494140625	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.85934	1	10514	10514		35.618	10.044	1	5963400			21280	1212	14346	14356	24552	24552					0.14682857190791765
KKLAPPNPLA	10	Unmodified	_KKLAPPNPLA_					0	0	0			REV__nc|ENSG00000257923|P39880-6|CUX1	REV__nc|ENSG00000257923|P39880-6|CUX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8272094726562	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.85934	1	10338	10338		35.618	0	1	23918000	+		21281	23925	14347	14357	24553	24553					0.12214899127980061
KKLARGLRITI	11	Unmodified	_KKLARGLRITI_					0	0	0			REV__nc|ENSG00000170242|Q96K76-2|USP47	REV__nc|ENSG00000170242|Q96K76-2|USP47	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.892822265625	2	634.929889	1267.84522	-0.007508	-4.767E-06	4.3806	0.0027814	4.3731	0.0027766	635.4352865349161	105.76	0.34384	105.76	105.51	105.85	0					11	7	2	0	0	0	0.16675	1	10945	10945		65.465	23.069	1	36506	+		21282	21638	14348	14358	24554	24554					0.22201588164512032
KKLASLVVC	9	Unmodified	_KKLASLVVC_					0	0	0		AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.80084228515625	2	480.799163	959.583773	-0.095215	-4.5779E-05	3.4854	0.0016758	3.3902	0.00163	480.80074135922035	95.38	4.3631	95.446	94.67	99.033	0.065918					323	101	5	0	0	0	0.72402	2	9964	9964;10182		38.806	6.8513	1	17278000			21283	2	14349	14359	24555;24556	24555					0.1023646547325825
KKLASLVVC	9	Unmodified	_KKLASLVVC_					0	0	0		AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.80126953125	2	480.799163	959.583773	2.0445	0.00098299	1.3323	0.00064055	3.3768	0.0016235	480.7997098356697	95.287	4.3541	95.23	94.639	98.993	-0.057526					326	101	5	0	0	0	0.77546	2	10129	10129;10278		31.955	7.7521	1	19210000			21284	2	14349	14359	24557;24558	24557					0.1023646547325825
KKLASLVVC	9	Unmodified	_KKLASLVVC_					0	0	0		AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.80059814453125	2	480.799163	959.583773	-0.79098	-0.0003803	4.1385	0.0019898	3.3475	0.0016095	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.72402	3	9730	9706;9730;9877		38.806	7.7521	1	18644000			21285	2	14349	14359	24559;24560;24561	24560					0.1023646547325825
KKLASLVVC	9	Unmodified	_KKLASLVVC_					0	0	0		AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8008117675781	2	480.799163	959.583773	0.73477	0.00035328	2.7032	0.0012997	3.438	0.001653	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.72402	3	9770	9700;9770;9806		38.806	5.2906	1	18148000			21286	2	14349	14359	24562;24563;24564	24563					0.1023646547325825
KKLASLVVC	9	Unmodified	_KKLASLVVC_					0	0	0		AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.80126953125	2	480.799163	959.583773	1.8222	0.00087609	2.1635	0.0010402	3.9856	0.0019163	480.8000859655465	94.893	2.2797	95.326	94.801	97.081	0.4324					179	54	5	0	0	0	0.77546	2	11350	11350;11362		31.955	0	1	7713500			21287	2	14349	14359	24565;24566	24565					0.1023646547325825
KKLASLVVC	9	Unmodified	_KKLASLVVC_					0	0	0		AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	AluJr_dup55426|chr12:49129800-49129995:-|1.1035877281044637|0.00056287750769|10.94|61.0|2|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.80072021484375	2	480.799163	959.583773	-0.2736	-0.00013155	4.2609	0.0020487	3.9873	0.0019171	480.80110367170755	95.033	3.9341	95.453	94.933	98.867	0.41964					263	95	5	0	0	0	0.69914	2	11390	11365;11390		40.573	2.8053	1	9403500			21288	2	14349	14359	24567;24568	24568					0.1023646547325825
KKLATSRKHSL	11	Unmodified	_KKLATSRKHSL_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.893310546875	2	634.893503	1267.77245	-0.0069402	-4.4063E-06	-1.6425	-0.0010428	-1.6494	-0.0010472	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.7144	1	11138	11138		29.17	1.0886	1	31286000			21289	1550	14350	14360	24569	24569					0.14927834371087556
KKLATSRKHSL	11	Unmodified	_KKLATSRKHSL_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5976867675781	3	423.598094	1267.77245	2.8995	0.0012282	-3.9608	-0.0016778	-1.0614	-0.0004496	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.7144	1	11504	11504		25.892	8.725	1	6928400			21290	1550	14350	14360	24570	24570					0.14927834371087556
KKLATSRKHSL	11	Unmodified	_KKLATSRKHSL_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8927612304688	2	634.893503	1267.77245	1.4999	0.00095225	-3.3387	-0.0021197	-1.8389	-0.0011675	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.61369	1	11202	11202		42.864	2.0861	1	68597000			21291	1550	14350	14360	24571	24571					0.14927834371087556
KKLATSRKHSL	11	Unmodified	_KKLATSRKHSL_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.892822265625	2	634.893503	1267.77245	0.93451	0.00059331	-2.8314	-0.0017976	-1.8969	-0.0012043	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.51007	1	11190	11190		51.193	6.8155	1	69492000			21292	1550	14350	14360	24572	24572					0.14927834371087556
KKLATSRKHSL	11	Unmodified	_KKLATSRKHSL_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.89306640625	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.55601	1	11321	11321		47.96	0.30219	1	66671000			21293	1550	14350	14360	24573	24573					0.14927834371087556
KKLAVPVG	8	Unmodified	_KKLAVPVG_					0	0	0			REV__nc|ENSG00000151414|Q8TDX7-2|NEK7	REV__nc|ENSG00000151414|Q8TDX7-2|NEK7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.24853515625	2	406.273638	810.532724	-1.9276	-0.00078312	-4.1904	-0.0017024	-6.1179	-0.0024856	406.27223707919063	88.225	0.32622	88.395	88.169	88.495	0.16923					14	7	3	0	0	0	0.4196	1	8673	8673		46.766	2.2354	1	297770	+		21294	20248	14351	14361	24574	24574					0.11987884490713441
KKLAVPVG	8	Unmodified	_KKLAVPVG_					0	0	0			REV__nc|ENSG00000151414|Q8TDX7-2|NEK7	REV__nc|ENSG00000151414|Q8TDX7-2|NEK7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.273638	810.532724	3.0797	0.0012512	-6.6892	-0.0027176	-3.6095	-0.0014664	406.27023733636423	88.205	0.89339	88.256	87.988	88.882	0.050415	-0.076347	-0.0005641	NaN	46.766	30	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	438780	+		21295	20248	14351	14361							0.11987884490713441
KKLAVPVG	8	Unmodified	_KKLAVPVG_					0	0	0			REV__nc|ENSG00000151414|Q8TDX7-2|NEK7	REV__nc|ENSG00000151414|Q8TDX7-2|NEK7	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	406.273638	810.532724	0.62021	0.00025198	-6.7706	-0.0027507	-6.1504	-0.0024987	406.2706624158418	88.195	0.29379	88.346	88.071	88.365	0.15055	0.013695	-0.00063026	NaN	46.766	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	166780	+		21296	20248	14351	14361							0.11987884490713441
KKLDPPKTY	9	Unmodified	_KKLDPPKTY_					0	0	0		ENST00000415664.2_21:10987833-11013471:-|nuORF	ENST00000415664.2_21:10987833-11013471:-|nuORF	ENST00000415664.2_21:10987833-11013471:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3182373046875	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.6204	1	10235	10235		45.972	15.655	1	4868200			21297	11384	14352	14362	24575	24575					0.08222889028479585
KKLDTTTKKT	10	Unmodified	_KKLDTTTKKT_					0	0	0			REV__ENSG00000118412|ENST00000551025|CASP8AP2	REV__ENSG00000118412|ENST00000551025|CASP8AP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8539428710938	2	582.353345	1162.69214	0.16989	9.8934E-05	0.2763	0.00016091	0.44619	0.00025984	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.86218	1	12442	12442		32.812	10.853	1	635410	+		21298	18308	14353	14363	24576	24576					0.11729928257364008
KKLEEEKGKK	10	Unmodified	_KKLEEEKGKK_					0	0	0		ENSG00000119707|ENST00000261973|RBM25	ENSG00000119707|ENST00000261973|RBM25	ENSG00000119707|ENST00000261973|RBM25	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2491149902344	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.15	1	117.13	116.63	117.63	-0.02433								0	0	0	0.45132	1	12976	12976		19.263	1.4295	1				21299	3091	14354	14364	24577	24577					0.1194561714869451
KKLEELRQRL	10	Unmodified	_KKLEELRQRL_					0	0	0			REV__ENSG00000151474|ENST00000357447|FRMD4A	REV__ENSG00000151474|ENST00000357447|FRMD4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.27301025390625	3	438.273499	1311.79867	-1.4634	-0.00064136	0.1078	4.7245E-05	-1.3556	-0.00059411	438.2734550831373	106.96	1.4325	107.1	106.6	108.03	0.14105					150	35	5	0	0	0	0.85441	1	11486	11486		20.837	0.80668	1	5372900	+		21300	20253	14355	14365	24578	24578					0.15524103542543344
KKLEIEKACV	10	Unmodified	_KKLEIEKACV_					0	0	0			REV__nc|ENSG00000102362|Q96C24-2|SYTL4	REV__nc|ENSG00000102362|Q96C24-2|SYTL4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.8405151367188	2	580.839017	1159.66348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.556	1	20.486	19.986	20.986	-0.070013								0	0	0	0.45132	1	525	525		19.997	1.6724	1		+		21301	17337	14356	14366	24579	24579					0.09003487356585538
KKLEKIRVRV	10	Unmodified	_KKLEKIRVRV_					0	0	0		nc|ENSG00000112851|Q96RT1-7|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.892578125	2	634.929889	1267.84522	2.7969	0.0017758	-0.21816	-0.00013852	2.5787	0.0016373	634.9298329121528	106.07	0.28586	106.03	105.9	106.18	-0.03714					10	6	2	0	0	0	0.37624	1	11721	11721		40.778	18.199	1	81204			21302	14852	14357	14367	24580	24580					0.22201588164489294
KKLEKIRVRV	10	Unmodified	_KKLEKIRVRV_					0	0	0		nc|ENSG00000112851|Q96RT1-7|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8927612304688	2	634.929889	1267.84522	1.4967	0.00095031	-2.6516	-0.0016836	-1.1549	-0.00073329	634.9291194412542	105.14	0.72145	105.3	105.09	105.81	0.15924					22	18	2	0	0	0	0.37624	1	11226	11226		40.778	9.2484	1	334710			21303	14852	14357	14367	24581	24581					0.22201588164489294
KKLEQLLPP	9	Unmodified	_KKLEQLLPP_					0	0	0			REV__ENSG00000169710|ENST00000306749|FASN	REV__ENSG00000169710|ENST00000306749|FASN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.3394775390625	2	533.336967	1064.65938	3.0971	0.0016518	2.9068	0.0015503	6.0039	0.0032021	533.3384140007198	99.339	2.8367	99.285	98.69	101.53	-0.053741					182	66	5	0	0	0	0.7932	2	10816	10756;10816		24.203	2.2429	1	3163800	+		21304	21595	14358	14368	24582;24583	24583					0.12963765925201187
KKLFDVKATG	10	Unmodified	_KKLFDVKATG_					0	0	0			REV__ENSG00000133706|ENST00000394434|LARS1	REV__ENSG00000133706|ENST00000394434|LARS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8297119140625	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.82886	1	9048	9048		37.812	6.2817	1	1489800	+		21305	19091	14359	14369	24584	24584					0.10094577919790026
KKLFDVKATG	10	Unmodified	_KKLFDVKATG_					0	0	0			REV__ENSG00000133706|ENST00000394434|LARS1	REV__ENSG00000133706|ENST00000394434|LARS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8306274414062	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.86106	1	9503	9503		33.922	3.418	1	5219600	+		21306	19091	14359	14369	24585	24585					0.10094577919790026
KKLFDVKATG	10	Unmodified	_KKLFDVKATG_					0	0	0			REV__ENSG00000133706|ENST00000394434|LARS1	REV__ENSG00000133706|ENST00000394434|LARS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8300170898438	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.86272	1	9083	9083		24.519	0	1	6402500	+		21307	19091	14359	14369	24586	24586					0.10094577919790026
KKLFDVKATG	10	Unmodified	_KKLFDVKATG_					0	0	0			REV__ENSG00000133706|ENST00000394434|LARS1	REV__ENSG00000133706|ENST00000394434|LARS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8306884765625	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.86698	1	9200	9200		28.081	1.3886	1	6029400	+		21308	19091	14359	14369	24587	24587					0.10094577919790026
KKLFDVKATG	10	Unmodified	_KKLFDVKATG_					0	0	0			REV__ENSG00000133706|ENST00000394434|LARS1	REV__ENSG00000133706|ENST00000394434|LARS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8297119140625	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.86348	1	8605	8605		31.53	1.2121	1	1728300	+		21309	19091	14359	14369	24588	24588					0.10094577919790026
KKLFDVKATG	10	Unmodified	_KKLFDVKATG_					0	0	0			REV__ENSG00000133706|ENST00000394434|LARS1	REV__ENSG00000133706|ENST00000394434|LARS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8299560546875	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.74274	2	9015	9015;9088		42.396	11.892	1	5453100	+		21310	19091	14359	14369	24589;24590	24589					0.10094577919790026
KKLFDVKATG	10	Unmodified	_KKLFDVKATG_					0	0	0			REV__ENSG00000133706|ENST00000394434|LARS1	REV__ENSG00000133706|ENST00000394434|LARS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8300170898438	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.86348	1	10769	10769		31.53	4.8369	1	5911200	+		21311	19091	14359	14369	24591	24591					0.10094577919790026
KKLFELEKL	9	Unmodified	_KKLFELEKL_					0	0	0			REV__ENST00000463634.6_1_6:4041126-4056780:+|nuORF	REV__ENST00000463634.6_1_6:4041126-4056780:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3566284179688	2	574.357899	1146.70125	-1.0357	-0.00059487	-2.3996	-0.0013783	-3.4354	-0.0019731	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.7932	1	10646	10646		23.042	1.0826	1	715310	+		21312	17962	14360	14370	24592	24592					0.13376321613714026
KKLGFKRAM	9	Unmodified	_KKLGFKRAM_					0	0	0		nc|ENSG00000151687|Q7Z5J8-4|ANKAR;nc|ENSG00000151687|Q7Z5J8-3|ANKAR;nc|ENSG00000151687|Q7Z5J8-2|ANKAR;ENSG00000151687|ENST00000684021|ANKAR	nc|ENSG00000151687|Q7Z5J8-4|ANKAR	nc|ENSG00000151687|Q7Z5J8-4|ANKAR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.8324584960938	2	539.831329	1077.6481	2.7941	0.0015083	-0.72952	-0.00039382	2.0646	0.0011145	539.830784350364	95.087	2.072	95.029	94.598	96.67	-0.057526					123	48	4	0	0	0	0.74721	1	10140	10140		37.159	14.122	1	1548000			21313	5134	14361	14371	24593	24593					0.11238665350060728
KKLGFKRAM	9	Unmodified	_KKLGFKRAM_					0	0	0		nc|ENSG00000151687|Q7Z5J8-4|ANKAR;nc|ENSG00000151687|Q7Z5J8-3|ANKAR;nc|ENSG00000151687|Q7Z5J8-2|ANKAR;ENSG00000151687|ENST00000684021|ANKAR	nc|ENSG00000151687|Q7Z5J8-4|ANKAR	nc|ENSG00000151687|Q7Z5J8-4|ANKAR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.83203125	2	539.831329	1077.6481	1.2465	0.00067287	0.8545	0.00046129	2.101	0.0011342	539.8316497324216	94.945	1.777	94.991	94.576	96.353	0.046173					111	41	4	0	0	0	0.7932	3	9998	9998;10021;10045		24.203	2.0956	1	1475500			21314	5134	14361	14371	24594;24595;24596	24594					0.11238665350060728
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(41)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.843017578125	2	575.841894	1149.66923	-0.49921	-0.00028747	2.3914	0.0013771	1.8922	0.0010896	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.777	2	8827	8827;8839		40.573	9.0428	1	1518700			21315	826	14362	14372	24597;24598	24597	9				0.10038630658891634
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(56)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8425903320312	2	575.841894	1149.66923	-0.99735	-0.00057431	2.7404	0.001578	1.743	0.0010037	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.50394	2	9433	9433;9718		55.504	12.865	1	5638300			21316	826	14362	14372	24599;24600	24599	9				0.10038630658891634
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(56)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8425903320312	2	575.841894	1149.66923	1.6833	0.00096931	0.25656	0.00014774	1.9399	0.0011171	575.8419126202111	90.702	2.7581	90.632	88.716	91.474	-0.069977					216	65	4	0	0	0	0.50394	4	9439	9439;9450;9474;9594		55.504	22.692	1	1939000			21317	826	14362	14372	24601;24602;24603;24604	24601	9				0.10038630658891634
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(50)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8427124023438	2	575.841894	1149.66923	1.9391	0.0011166	-0.2647	-0.00015242	1.6745	0.00096422	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.60083	4	9906	9748;9772;9906;9955		50.025	18.495	1	5986700			21318	826	14362	14372	24605;24606;24607;24608	24607	9				0.10038630658891634
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(41)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8428955078125	2	575.841894	1149.66923	0.91496	0.00052687	0.96246	0.00055422	1.8774	0.0010811	575.8423131361362	90.432	2.8004	90.479	88.667	91.467	0.046448					215	66	4	0	0	0	0.777	3	9285	9285;9368;9403		40.573	13.88	1	2025300			21319	826	14362	14372	24609;24610;24611	24609	9				0.10038630658891634
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(41)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8425903320312	2	575.841894	1149.66923	0.91732	0.00052823	0.78637	0.00045282	1.7037	0.00098106	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.777	1	9569	9569		40.573	6.4001	1	5468500			21320	826	14362	14372	24612	24612	9				0.10038630658891634
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(58)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8434448242188	2	575.841894	1149.66923	0.60609	0.00034901	1.2709	0.00073183	1.877	0.0010808	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.47599	2	9096	8978;9096		57.811	20	1	2381900			21321	826	14362	14372	24613;24614	24614	9				0.10038630658891634
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(50)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8423461914062	2	575.841894	1149.66923	0.61103	0.00035186	1.1234	0.0006469	1.7344	0.00099876	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.60083	6	9430	9217;9323;9358;9430;9466;9479		50.025	22.142	1	6623700			21322	826	14362	14372	24615;24616;24617;24618;24619;24620	24618	9				0.10038630658891634
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(41)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8428955078125	2	575.841894	1149.66923	0.78302	0.0004509	1.062	0.00061152	1.845	0.0010624	575.8423757005949	90.383	2.7025	90.537	88.725	91.427	0.15388					214	64	4	0	0	0	0.777	3	8974	8974;9069;9093		40.573	10.069	1	2399100			21323	826	14362	14372	24621;24622;24623	24621	9				0.10038630658891634
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(48)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8429565429688	2	575.841894	1149.66923	0.80402	0.00046299	0.89767	0.00051691	1.7017	0.0009799	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.6398	5	9242	9242;9266;9410;9494;9531		47.916	22.342	1	6947200			21324	826	14362	14372	24624;24625;24626;24627;24628	24624	9				0.10038630658891634
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(58)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8423461914062	2	575.841894	1149.66923	-1.368	-0.00078774	3.3005	0.0019005	1.9325	0.0011128	575.8436459594299	90.372	2.9394	90.548	88.581	91.52	0.1758					221	69	4	0	0	0	0.47599	4	9078	8946;8981;9065;9078		57.811	14.999	1	2135900			21325	826	14362	14372	24629;24630;24631;24632	24632	9				0.10038630658891634
KKLGIPVVCH	10	Carbamidomethyl (C)	_KKLGIPVVC(Carbamidomethyl (C))H_	KKLGIPVVC(1)H		KKLGIPVVC(46)H		0	1	0		ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	ENSG00000016391|ENST00000315251|CHDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.8431396484375	2	575.841894	1149.66923	0.47616	0.00027419	0.47457	0.00027328	0.95073	0.00054747	575.8420203793453	90.225	2.3894	90.676	89.242	91.632	0.45058					94	60	2	0	0	0	0.67608	1	10700	10700		45.952	13.14	1	1893600			21326	826	14362	14372	24633	24633	9				0.10038630658891634
KKLGQVYRVF	10	Unmodified	_KKLGQVYRVF_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.3720092773438	2	619.374415	1236.73428	-0.10661	-6.6034E-05	-3.8471	-0.0023828	-3.9537	-0.0024488	619.3719649656875	101.89	1.4654	101.89	101.45	102.91	0					98	36	4	0	0	0	0.85466	1	10435	10435		20.947	1.8434	1	1989800	+		21327	17832	14363	14373	24634	24634					0.12537948456406411
KKLGQVYRVF	10	Unmodified	_KKLGQVYRVF_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.3782958984375	2	619.374415	1236.73428	-0.31167	-0.00019304	-2.5734	-0.0015939	-2.885	-0.0017869	619.3734435178485	101.78	1.7281	101.8	101.4	103.13	0.01989					94	41	4	0	0	0	0.8651	1	10954	10954		25.574	0.44807	1	3076000	+		21328	17832	14363	14373	24635	24635					0.12537948456406411
KKLHKFRTIA	10	Unmodified	_KKLHKFRTIA_					0	0	0			REV__ENSG00000118322|ENST00000327245|ATP10B	REV__ENSG00000118322|ENST00000327245|ATP10B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3934936523438	2	621.395682	1240.77681	-1.2196	-0.00075786	-3.6898	-0.0022928	-4.9094	-0.0030507	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.85466	1	11142	11142		20.947	3.4789	1	23459000	+		21329	18304	14364	14374	24636	24636					0.1660534358466066
KKLHLSILN	9	Unmodified	_KKLHLSILN_					0	0	0			REV__ENSG00000212124|ENST00000390673|TAS2R19	REV__ENSG00000212124|ENST00000390673|TAS2R19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.3401489257812	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.78536	1	10036	10036		29.15	4.9468	1	1199500	+		21330	23600	14365	14375	24637	24637					0.14086588019335977
KKLHWALKGAS	11	Unmodified	_KKLHWALKGAS_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8694458007812	2	619.87204	1237.72953	-0.30615	-0.00018977	-3.8344	-0.0023768	-4.1405	-0.0025666	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.7342	1	10060	10060		25.574	1.0549	1	4796900			21331	7573	14366	14376	24638	24638					0.1201706431365892
KKLIEGDLH	9	Unmodified	_KKLIEGDLH_					0	0	0			REV__ENSG00000206384|ENST00000358511|COL6A6	REV__ENSG00000206384|ENST00000358511|COL6A6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.8082275390625	2	526.808574	1051.60259	-0.10054	-5.2966E-05	-0.84901	-0.00044727	-0.94955	-0.00050023	526.80805153199	100.65	1.7806	100.86	100.42	102.2	0.21511					97	42	4	0	0	0	0.28163	1	10581	10581		66.429	5.4573	1	2744500	+		21332	23587	14367	14377	24639	24639					0.07885718368675043
KKLIEGDLH	9	Unmodified	_KKLIEGDLH_					0	0	0			REV__ENSG00000206384|ENST00000358511|COL6A6	REV__ENSG00000206384|ENST00000358511|COL6A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.80810546875	2	526.808574	1051.60259	2.1591	0.0011374	-4.2531	-0.0022406	-2.0941	-0.0011032	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.35373	1	12172	12172		60.972	7.6205	1	36320000	+		21333	23587	14367	14377	24640	24640					0.07885718368675043
KKLIEGDLH	9	Unmodified	_KKLIEGDLH_					0	0	0			REV__ENSG00000206384|ENST00000358511|COL6A6	REV__ENSG00000206384|ENST00000358511|COL6A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8084106445312	2	526.808574	1051.60259	1.8843	0.00099267	-3.7441	-0.0019724	-1.8598	-0.00097976	526.806675241247	99.062	1.2342	99.425	98.602	99.837	0.36292					102	30	5	0	0	0	0.17307	2	12018	12006;12018		79.451	5.4763	1	32274000	+		21334	23587	14367	14377	24641;24642	24642					0.07885718368675043
KKLIEGDLH	9	Unmodified	_KKLIEGDLH_					0	0	0			REV__ENSG00000206384|ENST00000358511|COL6A6	REV__ENSG00000206384|ENST00000358511|COL6A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8082885742188	2	526.808574	1051.60259	2.1723	0.0011444	-3.985	-0.0020993	-1.8127	-0.00095493	526.806498827833	99.792	0.95116	100.16	99.637	100.59	0.36292					61	16	4	0	0	0	0.17307	1	12078	12078		79.451	2.6769	1	16717000	+		21335	23587	14367	14377	24643	24643					0.07885718368675043
KKLIELHEP	9	Unmodified	_KKLIELHEP_					0	0	0			REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3	REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8297729492188	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.74721	1	8976	8976		37.159	5.2042	1	6402500	+		21336	18198	14368	14378	24644	24644					0.10094577919812764
KKLIRKMKQL	10	Unmodified	_KKLIRKMKQL_					0	0	0			REV__ENST00000379463.6_1_16:66850506-66850557:-|nuORF	REV__ENST00000379463.6_1_16:66850506-66850557:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4059448242188	2	643.428667	1284.84278	-1.1467	-0.00073785	4.46	0.0028697	3.3132	0.0021318	643.4322021326434	106.23	0.24905	106.28	106.22	106.47	0.053757					6	5	2	0	0	0	0.37624	1	11319	11319		35.618	0	1	83709	+		21337	25920	14369	14379	24645	24645					0.21175416435198713
KKLKELVLY	9	Unmodified	_KKLKELVLY_					0	0	0			REV__ENST00000474906.2_1_6:76388527-76407234:+|nuORF	REV__ENST00000474906.2_1_6:76388527-76407234:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3609008789062	2	567.368267	1132.72198	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.16	1	111.15	110.65	111.65	-0.0074387								0	0	0	0.33676	1	11849	11849		18.324	0.95945	1		+		21338	17960	14370	14380	24646	24646					0.16092911993382586
KKLKEQLTY	9	Unmodified	_KKLKEQLTY_					0	0	0		nc|ENSG00000135541|Q8N157-3|AHI1;nc|ENSG00000135541|Q8N157-2|AHI1;ENSG00000135541|ENST00000265602|AHI1	nc|ENSG00000135541|Q8N157-3|AHI1	nc|ENSG00000135541|Q8N157-3|AHI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8425903320312	2	575.845156	1149.67576	-0.49921	-0.00028747	-3.2743	-0.0018855	-3.7735	-0.002173	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.71772	1	8961	8961		39.253	1.4413	1	1518700			21339	4034	14371	14381	24647	24647					0.10690847091291289
KKLKGNDVRII	11	Unmodified	_KKLKGNDVRII_					0	0	0		ENSG00000136928|ENST00000259455|GABBR2	ENSG00000136928|ENST00000259455|GABBR2	ENSG00000136928|ENST00000259455|GABBR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.2357177734375	3	428.610111	1282.8085	0.39471	0.00016918	-3.6052	-0.0015452	-3.2105	-0.001376	428.943922345516	63.149	0.095833	63.271	63.216	63.312	0.12253					5	3	2	0	0	0	0.17911	1	5528	5528		13.508	2.9211	1	27578			21340	4156	14372	14382	24648	24648					0.17841291547938454
KKLKHEKRN	9	Unmodified	_KKLKHEKRN_					0	0	0			REV__ENSG00000080493|ENST00000264485|SLC4A4;REV__ENSG00000033867|ENST00000454389|SLC4A7;REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENSG00000033867|ENST00000454389|SLC4A7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8668212890625	2	590.867289	1179.72002	-0.23931	-0.0001414	-0.95289	-0.00056303	-1.1922	-0.00070443	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.78536	1	10773	10773		29.15	1.2673	1	39787000	+		21341	16801;16283;19880	14373	14383	24649	24649					0.13735296028130506
KKLKHEKRN	9	Unmodified	_KKLKHEKRN_					0	0	0			REV__ENSG00000080493|ENST00000264485|SLC4A4;REV__ENSG00000033867|ENST00000454389|SLC4A7;REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENSG00000033867|ENST00000454389|SLC4A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8671264648438	2	590.867289	1179.72002	-0.64255	-0.00037966	-1.0172	-0.00060105	-1.6598	-0.00098071	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.58668	1	11098	11098		47.657	11.211	1	52912000	+		21342	16801;16283;19880	14373	14383	24650	24650					0.13735296028130506
KKLKHEKRN	9	Unmodified	_KKLKHEKRN_					0	0	0			REV__ENSG00000080493|ENST00000264485|SLC4A4;REV__ENSG00000033867|ENST00000454389|SLC4A7;REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENSG00000033867|ENST00000454389|SLC4A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.86669921875	2	590.867289	1179.72002	-0.76513	-0.00045209	-0.7988	-0.00047199	-1.5639	-0.00092408	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.51307	1	11262	11262		51.335	1.8939	1	54208000	+		21343	16801;16283;19880	14373	14383	24651	24651					0.13735296028130506
KKLKHEKRN	9	Unmodified	_KKLKHEKRN_					0	0	0			REV__ENSG00000080493|ENST00000264485|SLC4A4;REV__ENSG00000033867|ENST00000454389|SLC4A7;REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENSG00000033867|ENST00000454389|SLC4A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8662719726562	2	590.867289	1179.72002	0.84845	0.00050132	-2.4301	-0.0014359	-1.5816	-0.00093454	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.51307	2	10998	10962;10998		51.335	17.163	1	94771000	+		21344	16801;16283;19880	14373	14383	24652;24653	24653					0.13735296028130506
KKLKHEKRN	9	Unmodified	_KKLKHEKRN_					0	0	0			REV__ENSG00000080493|ENST00000264485|SLC4A4;REV__ENSG00000033867|ENST00000454389|SLC4A7;REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENSG00000033867|ENST00000454389|SLC4A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8662719726562	2	590.867289	1179.72002	0.89156	0.00052679	-2.3999	-0.001418	-1.5084	-0.00089125	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.67345	2	10919	10919;10979		42.396	4.5846	1	84183000	+		21345	16801;16283;19880	14373	14383	24654;24655	24654					0.13735296028130506
KKLKHEKRN	9	Unmodified	_KKLKHEKRN_					0	0	0			REV__ENSG00000080493|ENST00000264485|SLC4A4;REV__ENSG00000033867|ENST00000454389|SLC4A7;REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENSG00000033867|ENST00000454389|SLC4A7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8652954101562	2	590.867289	1179.72002	1.3812	0.0008161	-2.2271	-0.0013159	-0.8459	-0.00049981	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.78983	1	12502	12502		27.882	2.3082	1	6168400	+		21346	16801;16283;19880	14373	14383	24656	24656					0.13735296028130506
KKLKHRRTS	9	Unmodified	_KKLKHRRTS_					0	0	0		nc|ENSG00000173210|O94929-2|ABLIM3;nc|ENSG00000173210|O94929-3|ABLIM3;ENSG00000173210|ENST00000309868|ABLIM3	nc|ENSG00000173210|O94929-2|ABLIM3	nc|ENSG00000173210|O94929-2|ABLIM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3668212890625	2	577.367456	1152.72036	0.64818	0.00037424	-2.4151	-0.0013944	-1.7669	-0.0010202	577.3659582171192	102.04	3.0704	102.23	101.84	104.91	0.19484					206	76	5	0	0	0	0.78536	1	10851	10851		29.15	4.9468	1	17266000			21347	6839	14374	14384	24657	24657					0.1501071574798516
KKLKHRRTS	9	Unmodified	_KKLKHRRTS_					0	0	0		nc|ENSG00000173210|O94929-2|ABLIM3;nc|ENSG00000173210|O94929-3|ABLIM3;ENSG00000173210|ENST00000309868|ABLIM3	nc|ENSG00000173210|O94929-2|ABLIM3	nc|ENSG00000173210|O94929-2|ABLIM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	577.3663330078125	2	577.367456	1152.72036	0.87834	0.00050713	-2.6389	-0.0015236	-1.7606	-0.0010165	577.3658132315567	102.16	3.1638	102.3	101.85	105.01	0.13522					236	78	5	0	0	0	0.7932	1	10727	10727		24.203	0	1	15036000			21348	6839	14374	14384	24658	24658					0.1501071574798516
KKLKKSAGT	9	Unmodified	_KKLKKSAGT_					0	0	0			REV__ENSG00000124610|ENST00000244573|H1-1	REV__ENSG00000124610|ENST00000244573|H1-1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.80096435546875	2	480.813659	959.612765	0.73185	0.00035188	-3.7264	-0.0017917	-2.9945	-0.0014398	480.8115966281846	94.996	0.27995	95.159	94.99	95.27	0.16307					9	6	2	0	0	0	0.20789	1	9711	9711		21.96	3.6355	1	126160	+		21349	18601	14375	14385	24659	24659					0.13134326093893378
KKLKLAQLWN	10	Unmodified	_KKLKLAQLWN_					0	0	0			REV__ENSG00000149115|ENST00000358252|TNKS1BP1	REV__ENSG00000149115|ENST00000358252|TNKS1BP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3923950195312	2	621.390065	1240.76558	2.9766	0.0018496	1.2761	0.00079293	4.2527	0.0026426	621.3907359645153	104.71	2.7313	104.66	104.1	106.83	-0.04039					247	64	5	0	0	0	0.53935	1	11541	11541		53.351	16.192	1	12926000	+		21350	20149	14376	14386	24660	24660					0.15482521490503132
KKLKPRTPW	9	Unmodified	_KKLKPRTPW_					0	0	0		chr17:10398640-10398768|46|181.0|0.42|8.74|-|1|MYH8,MYH8|3	chr17:10398640-10398768|46|181.0|0.42|8.74|-|1|MYH8,MYH8|3	chr17:10398640-10398768|46|181.0|0.42|8.74|-|1|MYH8,MYH8|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	577.3670043945312	2	577.36385	1152.71315	0.87835	0.00050713	3.6055	0.0020817	4.4839	0.0025888	577.3658132315567	102.16	3.1638	102.3	101.85	105.01	0.13522					236	78	5	0	0	0	0.7932	1	10975	10975		21.96	3.6355	1	15036000			21351	211	14377	14387	24661	24661					0.14289983147546081
KKLKQTYL	8	Unmodified	_KKLKQTYL_					0	0	0		nc|ENSG00000255374|P59539|TAS2R45	nc|ENSG00000255374|P59539|TAS2R45	nc|ENSG00000255374|P59539|TAS2R45	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.3272705078125	2	511.32386	1020.63317	2.4721	0.001264	3.8453	0.0019662	6.3174	0.0032303	511.3257127043103	97.291	2.1515	97.235	96.802	98.953	-0.055542					136	49	4	0	0	0	0.82464	1	10492	10492		21.702	3.3779	1	1837000			21352	15296	14378	14388	24662	24662					0.12367496753699925
KKLLEAARAG	10	Unmodified	_KKLLEAARAG_					0	0	0		nc|ENSG00000104064|Q06547-4|GABPB1;nc|ENSG00000104064|Q06547-3|GABPB1;ENSG00000104064|ENST00000380877|GABPB1;nc|ENSG00000104064|Q06547|GABPB1	nc|ENSG00000104064|Q06547-4|GABPB1	nc|ENSG00000104064|Q06547-4|GABPB1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.830078125	2	528.82984	1055.64513	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.918	1	32.916	32.416	33.416	-0.0016365								0	0	0	0.45132	1	1903	1903		22.58	1.6327	1				21353	2112	14379	14389	24663	24663					0.11953113496883816
KKLLEVVESIK	11	Unmodified	_KKLLEVVESIK_					0	0	0			REV__nc|ENSG00000116062|P52701-4|MSH6	REV__nc|ENSG00000116062|P52701-4|MSH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.405517578125	2	643.408121	1284.80169	-0.027625	-1.7774E-05	-1.7739	-0.0011413	-1.8015	-0.0011591	643.4069538956494	107.53	1.1842	107.49	106.64	107.82	-0.034401					87	27	4	0	0	0	0.72739	1	11644	11644		27.047	0.3544	1	2502500	+		21354	18176	14380	14390	24664	24664					0.17067933876705865
KKLLEVVESIK	11	Unmodified	_KKLLEVVESIK_					0	0	0			REV__nc|ENSG00000116062|P52701-4|MSH6	REV__nc|ENSG00000116062|P52701-4|MSH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4059448242188	2	643.408121	1284.80169	-1.1464	-0.0007376	-1.6448	-0.0010583	-2.7912	-0.0017959	643.4069214023369	106.26	1.0134	106.32	106.14	107.15	0.053749					110	23	5	0	0	0	0.61369	1	11319	11319		42.864	3.6114	1	13678000	+		21355	18176	14380	14390	24665	24665					0.17067933876705865
KKLLKPGPLKR	11	Unmodified	_KKLLKPGPLKR_					0	0	0		ENSG00000120057|ENST00000266066|SFRP5	ENSG00000120057|ENST00000266066|SFRP5	ENSG00000120057|ENST00000266066|SFRP5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.2467346191406	3	426.630847	1276.87071	0.72941	0.00031119	-0.36045	-0.00015378	0.36896	0.00015741	426.6306902344106	84.832	1.2149	84.76	84.238	85.453	-0.07196					39	27	2	0	0	0	0.18318	1	8689	8689		9.6461	7.7592	1	34809			21356	3112	14381	14391	24666	24666					0.24335062686918718
KKLLKPGPLKR	11	Unmodified	_KKLLKPGPLKR_					0	0	0		ENSG00000120057|ENST00000266066|SFRP5	ENSG00000120057|ENST00000266066|SFRP5	ENSG00000120057|ENST00000266066|SFRP5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	426.630847	1276.87071	-0.18192	-7.7613E-05	0.65135	0.00027789	0.46943	0.00020027	426.6310317478913	84.777	0.73889	84.844	84.334	85.073	0.067169	-0.085279	0.0017294	NaN	3.2113	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40474			21357	3112	14381	14391							0.24335062686918718
KKLLKPGPLKR	11	Unmodified	_KKLLKPGPLKR_					0	0	0		ENSG00000120057|ENST00000266066|SFRP5	ENSG00000120057|ENST00000266066|SFRP5	ENSG00000120057|ENST00000266066|SFRP5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	426.630847	1276.87071	2.4073	0.001027	-2.1906	-0.00093459	0.21672	9.246E-05	426.6298021889312	85.125	0.95611	85.184	84.328	85.284	0.05925	0.25482	-0.001908	NaN	3.2113	38	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41929			21358	3112	14381	14391							0.24335062686918718
KKLLKYLKK	9	Unmodified	_KKLLKYLKK_					0	0	0		ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA	ENSG00000011007|ENST00000613537|ELOA	ENSG00000011007|ENST00000613537|ELOA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.4055786132812	2	581.407727	1160.8009	0.27248	0.00015842	-3.6485	-0.0021212	-3.376	-0.0019628	581.40539803952	108.96	0.64938	108.99	108.59	109.24	0.034355					68	31	3	0	0	0	0.7932	1	11948	11948		7.6903	0	1	3975600			21359	776	14382	14392	24667	24667					0.22693184018294232
KKLLKYLKK	9	Unmodified	_KKLLKYLKK_					0	0	0		ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA	ENSG00000011007|ENST00000613537|ELOA	ENSG00000011007|ENST00000613537|ELOA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.404052734375	2	581.407727	1160.8009	0.88211	0.00051286	-4.1601	-0.0024187	-3.278	-0.0019058	581.4051889968249	108.93	0.52326	109.01	108.72	109.24	0.078552					47	23	3	0	0	0	0.7932	2	11708	11708;11716		12.959	4.7279	1	2018000			21360	776	14382	14392	24668;24669	24668					0.22693184018294232
KKLLLFLKA	9	Unmodified	_KKLLLFLKA_					0	0	0		ENSG00000136261|ENST00000258761|BZW2;nc|ENSG00000136261|Q9Y6E2-2|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF	ENSG00000136261|ENST00000258761|BZW2;nc|ENSG00000136261|Q9Y6E2-2|BZW2	ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.3802490234375	2	537.375895	1072.73724	3.5358	0.0019001	2.8681	0.0015413	6.4039	0.0034413	537.3774099102002	109.05	0.48517	109.03	108.73	109.21	-0.029381					47	18	3	0	0	0	0.7932	1	12077	12077		12.959	0	1	3929900			21361	4099;12439	14383	14393	24670	24670					0.2037782358122513
KKLLNSAT	8	Unmodified	_KKLLNSAT_					0	0	0			REV__ENSG00000182263|ENST00000333129|FIGN	REV__ENSG00000182263|ENST00000333129|FIGN	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7704162597656	2	437.77146	873.528367	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.968	1	44.025	43.525	44.525	0.056744								0	0	0	0.30478	1	3070	3070		17.365	0	1		+		21362	22514	14384	14394	24671	24671					0.08654375277126292
KKLLPEASLLI	11	Unmodified	_KKLLPEASLLI_					0	0	0		nc|ENSG00000162711|Q96P20-3|NLRP3;ENST00000474792.1_1_1:247582090-247588902:+|nuORF;nc|ENSG00000162711|Q96P20-2|NLRP3;nc|ENSG00000162711|Q96P20-5|NLRP3;nc|ENSG00000162711|Q96P20-4|NLRP3;nc|ENSG00000162711|Q96P20-6|NLRP3;ENSG00000162711|ENST00000336119|NLRP3;nc|ENSG00000162711|Q96P20|NLRP3	nc|ENSG00000162711|Q96P20-3|NLRP3	nc|ENSG00000162711|Q96P20-3|NLRP3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.879638671875	2	612.899931	1223.78531	3.0915	0.0018948	3.2794	0.00201	6.371	0.0039048	612.9020256576898	104.91	0.74107	104.87	104.23	104.97	-0.04039					28	17	2	0	0	0	0.17243	1	11480	11480		19.104	0.84144	1	353990			21363	5723	14385	14395	24672	24672					0.18236852710629137
KKLLRTRNNV	10	Unmodified	_KKLLRTRNNV_					0	0	0		ENSG00000065485|ENST00000316218|PDIA5;nc|ENSG00000065485|Q14554-2|PDIA5	ENSG00000065485|ENST00000316218|PDIA5	ENSG00000065485|ENST00000316218|PDIA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3929443359375	2	621.39367	1240.77279	-0.078752	-4.8936E-05	-1.4235	-0.00088457	-1.5023	-0.0009335	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.74274	1	10833	10833		42.396	0	1	10411000			21364	1129	14386	14396	24673	24673					0.1620325409094221
KKLLRTRNNV	10	Unmodified	_KKLLRTRNNV_					0	0	0		ENSG00000065485|ENST00000316218|PDIA5;nc|ENSG00000065485|Q14554-2|PDIA5	ENSG00000065485|ENST00000316218|PDIA5	ENSG00000065485|ENST00000316218|PDIA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3929443359375	2	621.39367	1240.77279	-0.28789	-0.0001789	-1.2764	-0.00079315	-1.5643	-0.00097204	621.392781910036	104.72	2.6015	104.71	104.23	106.84	-0.014809					230	61	5	0	0	0	0.85934	3	11326	11278;11326;11338		35.618	2.1737	1	11881000			21365	1129	14386	14396	24674;24675;24676	24675					0.1620325409094221
KKLLRTRNNV	10	Unmodified	_KKLLRTRNNV_					0	0	0		ENSG00000065485|ENST00000316218|PDIA5;nc|ENSG00000065485|Q14554-2|PDIA5	ENSG00000065485|ENST00000316218|PDIA5	ENSG00000065485|ENST00000316218|PDIA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3927001953125	2	621.39367	1240.77279	1.3	0.00080781	-2.832	-0.0017598	-1.532	-0.00095195	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.5766	3	11090	11066;11078;11090		51.335	8.5985	1	23079000			21366	1129	14386	14396	24677;24678;24679	24679					0.1620325409094221
KKLLRTRNNV	10	Unmodified	_KKLLRTRNNV_					0	0	0		ENSG00000065485|ENST00000316218|PDIA5;nc|ENSG00000065485|Q14554-2|PDIA5	ENSG00000065485|ENST00000316218|PDIA5	ENSG00000065485|ENST00000316218|PDIA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3925170898438	2	621.39367	1240.77279	-1.2196	-0.00075786	-0.45293	-0.00028145	-1.6726	-0.0010393	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.85694	1	11030	11030		21.96	0	1	23459000			21367	1129	14386	14396	24680	24680					0.1620325409094221
KKLLVDSLPP	10	Unmodified	_KKLLVDSLPP_					0	0	0		ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.353759765625	2	555.350074	1108.6856	3.1602	0.001755	2.6303	0.0014608	5.7905	0.0032158	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.8608	2	11075	11063;11075		34.173	3.6689	1	5616800			21368	6723	14387	14397	24681;24682	24682					0.13560035096656975
KKLLVDSLPP	10	Unmodified	_KKLLVDSLPP_					0	0	0		ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.3533935546875	2	555.350074	1108.6856	1.3083	0.00072658	4.4118	0.0024501	5.7201	0.0031767	555.3524110053091	100.9	2.53	100.95	100.38	102.91	0.046356					182	60	5	0	0	0	0.85934	2	10883	10847;10883		35.618	5.1146	1	5418400			21369	6723	14387	14397	24683;24684	24684					0.13560035096656975
KKLMDLLPKR	10	Unmodified	_KKLMDLLPKR_					0	0	0		ENSG00000111605|ENST00000435070|CPSF6;nc|ENSG00000111605|Q16630-2|CPSF6;ENST00000547486.1_1_12:69645004-69651771:+|nuORF;nc|ENSG00000111605|Q16630-3|CPSF6	ENSG00000111605|ENST00000435070|CPSF6	ENSG00000111605|ENST00000435070|CPSF6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.392822265625	2	621.391751	1240.76895	2.9766	0.0018496	-1.4363	-0.00089248	1.5404	0.00095717	621.3907359645153	104.71	2.7313	104.66	104.1	106.83	-0.04039					247	64	5	0	0	0	0.85251	1	11640	11640		19.997	1.7347	1	12926000			21370	2588	14388	14398	24685	24685					0.15819448272827685
KKLPGFKKIH	10	Unmodified	_KKLPGFKKIH_					0	0	0		ENSG00000112706|ENST00000369950|IMPG1	ENSG00000112706|ENST00000369950|IMPG1	ENSG00000112706|ENST00000369950|IMPG1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3831176757812	2	598.387326	1194.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.916	1	15.916	15.416	16.416	0								0	0	0	0.45132	1	76	76		20.947	0.95016	1				21371	2677	14389	14399	24686	24686					0.17050842698699853
KKLPPSSPVI	10	Unmodified	_KKLPPSSPVI_					0	0	0			REV__ENST00000584437.5_1_17:56493464-56493545:-|nuORF	REV__ENST00000584437.5_1_17:56493464-56493545:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.340087890625	2	533.336967	1064.65938	3.0971	0.0016518	2.9068	0.0015503	6.0039	0.0032021	533.3384140007198	99.339	2.8367	99.285	98.69	101.53	-0.053741					182	66	5	0	0	0	0.85694	1	10732	10732		21.96	1.013	1	3163800	+		21372	29077	14390	14400	24687	24687					0.1296376592517845
KKLQKQAHVE	10	Unmodified	_KKLQKQAHVE_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4;nc|ENSG00000136002|Q9NR80-4|ARHGEF4;nc|ENSG00000136002|Q9NR80|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.8585815429688	2	604.859129	1207.70371	0.74234	0.00044901	-1.9527	-0.0011811	-1.2104	-0.00073212	604.8579756406821	82.657	1.0618	82.803	82.331	83.393	0.1455					60	24	3	0	0	0	0.86802	1	7958	7958		21.96	1.013	1	203650			21373	4078	14391	14401	24688	24688					0.10816170071348097
KKLQRRPPN	9	Unmodified	_KKLQRRPPN_					0	0	0			REV__ENSG00000101109|ENST00000372806|STK4;REV__nc|ENSG00000101109|Q13043-2|STK4	REV__ENSG00000101109|ENST00000372806|STK4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8539428710938	2	568.854181	1135.69381	-0.36185	-0.00020584	-1.2386	-0.0007046	-1.6005	-0.00091044	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.7932	1	10695	10695		23.042	2.0956	1	34546000	+		21374	17242;29743	14392	14402	24689	24689					0.1313902685665198
KKLQRRPPN	9	Unmodified	_KKLQRRPPN_					0	0	0			REV__ENSG00000101109|ENST00000372806|STK4;REV__nc|ENSG00000101109|Q13043-2|STK4	REV__ENSG00000101109|ENST00000372806|STK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8533935546875	2	568.854181	1135.69381	-1.1637	-0.000662	-0.61846	-0.00035181	-1.7822	-0.0010138	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.78058	1	11262	11262		30.504	2.6214	1	50786000	+		21375	17242;29743	14392	14402	24690	24690					0.1313902685665198
KKLQRRPPN	9	Unmodified	_KKLQRRPPN_					0	0	0			REV__ENSG00000101109|ENST00000372806|STK4;REV__nc|ENSG00000101109|Q13043-2|STK4	REV__ENSG00000101109|ENST00000372806|STK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.8533935546875	2	568.854181	1135.69381	1.5207	0.00086506	-3.4304	-0.0019514	-1.9097	-0.0010863	568.8521463691729	102.21	3.6255	102.25	101.63	105.26	0.04319					340	87	6	0	0	0	0.62081	1	11018	11018		45.952	10.334	1	51352000	+		21376	17242;29743	14392	14402	24691	24691					0.1313902685665198
KKLQRRPPN	9	Unmodified	_KKLQRRPPN_					0	0	0			REV__ENSG00000101109|ENST00000372806|STK4;REV__nc|ENSG00000101109|Q13043-2|STK4	REV__ENSG00000101109|ENST00000372806|STK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8546752929688	2	568.854181	1135.69381	-1.3907	-0.00079112	-0.55616	-0.00031637	-1.9469	-0.0011075	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.7932	1	10886	10886		23.042	2.0956	1	72465000	+		21377	17242;29743	14392	14402	24692	24692					0.1313902685665198
KKLQVSIFTAM	11	Unmodified	_KKLQVSIFTAM_					0	0	0			REV__ENST00000477798.5_1_3:33840175-33866683:+|nuORF	REV__ENST00000477798.5_1_3:33840175-33866683:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.368408203125	2	633.367941	1264.72133	2.3091	0.0014625	-0.43146	-0.00027328	1.8776	0.0011892	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.75457	1	11676	11676		17.468	1.8262	1	10333000	+		21378	21639	14393	14403	24693	24693					0.09955749282016768
KKLRHPLNWIL	11	Unmodified	_KKLRHPLNWIL_					0	0	0		ENSG00000269433|ENST00000599405|OPN1MW3;ENSG00000268221|ENST00000595290|OPN1MW;ENSG00000166160|ENST00000369929|OPN1MW2;ENSG00000102076|ENST00000369951|OPN1LW	ENSG00000269433|ENST00000599405|OPN1MW3	ENSG00000269433|ENST00000599405|OPN1MW3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	473.29864501953125	3	473.297868	1416.87177	-0.89168	-0.00042203	2.9807	0.0014108	2.089	0.00098873	473.2991519032533	107.53	0.67749	107.66	107.32	107.99	0.13867					65	16	5	0	0	0	0.74405	1	11563	11563		23.378	0	1	4814600			21379	1987	14394	14404	24694	24694					0.18001277055827813
KKLRNFLGLY	10	Unmodified	_KKLRNFLGLY_					0	0	0			REV__nc|ENSG00000163104|Q9H4L7-3|SMARCAD1	REV__nc|ENSG00000163104|Q9H4L7-3|SMARCAD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.8899536132812	2	626.38224	1250.74993	1.3724	0.00085963	3.6069	0.0022593	4.9793	0.0031189	626.8865198460213	110.73	0.34553	110.85	110.64	110.99	0.11659					25	14	2	0	0	0	0.85939	1	11913	11913		23.042	0.46283	1	64300	+		21380	20882	14395	14405	24695	24695					0.1345823497345009
KKLRREKLSQ	10	Unmodified	_KKLRREKLSQ_					0	0	0			REV__ENST00000333010.6_1_5:147040929-147162182:-|nuORF	REV__ENST00000333010.6_1_5:147040929-147162182:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4053344726562	2	643.406778	1284.799	-0.02708	-1.7423E-05	-1.3385	-0.00086122	-1.3656	-0.00087865	643.4057840301668	105.94	1.5968	105.91	105.23	106.82	-0.025146					165	37	6	0	0	0	0.67571	1	11525	11525		45.972	1.5951	1	14580000	+		21381	25145	14396	14406	24696	24696					0.16799523262420735
KKLRREKLSQ	10	Unmodified	_KKLRREKLSQ_					0	0	0			REV__ENST00000333010.6_1_5:147040929-147162182:-|nuORF	REV__ENST00000333010.6_1_5:147040929-147162182:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4059448242188	2	643.406778	1284.799	-0.027625	-1.7774E-05	0.31293	0.00020134	0.28531	0.00018357	643.4069538956494	107.53	1.1842	107.49	106.64	107.82	-0.034401					87	27	4	0	0	0	0.82886	2	11676	11610;11676		37.812	3.639	1	2502500	+		21382	25145	14396	14406	24697;24698	24698					0.16799523262420735
KKLRREKLSQ	10	Unmodified	_KKLRREKLSQ_					0	0	0			REV__ENST00000333010.6_1_5:147040929-147162182:-|nuORF	REV__ENST00000333010.6_1_5:147040929-147162182:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4056396484375	2	643.406778	1284.799	2.6785	0.0017233	-4.0081	-0.0025788	-1.3296	-0.00085549	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.67571	1	11631	11631		45.972	6.7194	1	14704000	+		21383	25145	14396	14406	24699	24699					0.16799523262420735
KKLRREKLSQ	10	Unmodified	_KKLRREKLSQ_					0	0	0			REV__ENST00000333010.6_1_5:147040929-147162182:-|nuORF	REV__ENST00000333010.6_1_5:147040929-147162182:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4055786132812	2	643.406778	1284.799	1.7782	0.0011441	-3.0269	-0.0019475	-1.2486	-0.00080338	643.4046886151041	105.77	1.7293	105.8	105.04	106.77	0.038322					167	40	5	0	0	0	0.86587	1	11580	11580		29.17	1.2878	1	14066000	+		21384	25145	14396	14406	24700	24700					0.16799523262420735
KKLSGRVFPPL	11	Unmodified	_KKLSGRVFPPL_					0	0	0		ENST00000514208.5_1_X:148622629-148627018:+|nuORF;ENST00000423421.5_1_X:148622837-148627018:+|nuORF;ENST00000431132.6_1_X:148621954-148627018:+|nuORF;ENST00000450602.6_1_X:148622209-148627018:+|nuORF	ENST00000514208.5_1_X:148622629-148627018:+|nuORF	ENST00000514208.5_1_X:148622629-148627018:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.392578125	2	621.390065	1240.76558	0.69841	0.00043398	3.6119	0.0022444	4.3103	0.0026784	621.3922056168815	104.57	2.6797	104.61	104.09	106.77	0.039856					250	63	5	0	0	0	0.69995	1	11376	11376		31.53	4.4825	1	13976000			21385	11497	14397	14407	24701	24701					0.1548252149052587
KKLSGRVFPPL	11	Unmodified	_KKLSGRVFPPL_					0	0	0		ENST00000514208.5_1_X:148622629-148627018:+|nuORF;ENST00000423421.5_1_X:148622837-148627018:+|nuORF;ENST00000431132.6_1_X:148621954-148627018:+|nuORF;ENST00000450602.6_1_X:148622209-148627018:+|nuORF	ENST00000514208.5_1_X:148622629-148627018:+|nuORF	ENST00000514208.5_1_X:148622629-148627018:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.392578125	2	621.390065	1240.76558	1.3	0.00080781	2.97	0.0018456	4.2701	0.0026534	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.72918	2	11162	11162;11374		26.693	4.733	1	23079000			21386	11497	14397	14407	24702;24703	24702					0.1548252149052587
KKLSGRVFPPL	11	Unmodified	_KKLSGRVFPPL_					0	0	0		ENST00000514208.5_1_X:148622629-148627018:+|nuORF;ENST00000423421.5_1_X:148622837-148627018:+|nuORF;ENST00000431132.6_1_X:148621954-148627018:+|nuORF;ENST00000450602.6_1_X:148622209-148627018:+|nuORF	ENST00000514208.5_1_X:148622629-148627018:+|nuORF	ENST00000514208.5_1_X:148622629-148627018:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3930053710938	2	621.390065	1240.76558	0.9213	0.00057249	3.1806	0.0019764	4.1019	0.0025489	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.6921	1	11191	11191		32.812	8.2932	1	22352000			21387	11497	14397	14407	24704	24704					0.1548252149052587
KKLSGRVFPPL	11	Unmodified	_KKLSGRVFPPL_					0	0	0		ENST00000514208.5_1_X:148622629-148627018:+|nuORF;ENST00000423421.5_1_X:148622837-148627018:+|nuORF;ENST00000431132.6_1_X:148621954-148627018:+|nuORF;ENST00000450602.6_1_X:148622209-148627018:+|nuORF	ENST00000514208.5_1_X:148622629-148627018:+|nuORF	ENST00000514208.5_1_X:148622629-148627018:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.3924560546875	2	621.390065	1240.76558	2.1086	0.0013103	2.5756	0.0016005	4.6842	0.0029107	621.3915992412323	104.3	2.0291	104.48	104.04	106.07	0.18888					138	51	4	0	0	0	0.70737	1	12694	12694		30.318	2.4355	1	1168000			21388	11497	14397	14407	24705	24705					0.1548252149052587
KKLSGRVFPPL	11	Unmodified	_KKLSGRVFPPL_					0	0	0		ENST00000514208.5_1_X:148622629-148627018:+|nuORF;ENST00000423421.5_1_X:148622837-148627018:+|nuORF;ENST00000431132.6_1_X:148621954-148627018:+|nuORF;ENST00000450602.6_1_X:148622209-148627018:+|nuORF	ENST00000514208.5_1_X:148622629-148627018:+|nuORF	ENST00000514208.5_1_X:148622629-148627018:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.3917236328125	2	621.390065	1240.76558	4.2384	0.0026337	0.33874	0.00021049	4.5771	0.0028442	621.3901654110842	104.31	1.8962	104.53	104.05	105.95	0.2268					124	45	4	0	0	0	0.7342	2	12722	12722;12779		25.574	2.0514	1	1273000			21389	11497	14397	14407	24706;24707	24706					0.1548252149052587
KKLSKLSL	8	Unmodified	_KKLSKLSL_					0	0	0			REV__ENSG00000198626|ENST00000366574|RYR2	REV__ENSG00000198626|ENST00000366574|RYR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.78729248046875	2	458.813128	915.611703	-1.7491	-0.00080249	2.8617	0.001313	1.1126	0.00051048	458.8147899591984	92.907	0.48794	93.1	92.904	93.392	0.19239					14	11	2	0	0	0	0.4196	1	9375	9375		18.324	0	1	46846	+		21390	23347	14398	14408	24708	24708					0.150521117249923
KKLSQKLRKL	10	Unmodified	_KKLSQKLRKL_					0	0	0			REV__ENST00000393094.6_1_11:107959354-107960261:+|nuORF	REV__ENST00000393094.6_1_11:107959354-107960261:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.392822265625	2	621.424439	1240.83433	0.92094	0.00057229	-1.2006	-0.00074611	-0.27971	-0.00017382	621.4243800601091	104.38	0.39143	104.5	104.28	104.67	0.11685					11	9	2	0	0	0	0.37624	1	11057	11057		20.947	0	1	105130	+		21391	26048	14399	14409	24709	24709					0.22354185790209158
KKLSRTQAS	9	Unmodified	_KKLSRTQAS_					0	0	0		ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80364990234375	2	509.803823	1017.59309	-0.89954	-0.00045859	0.77889	0.00039708	-0.12065	-6.1507E-05	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.69624	1	8425	8425		40.778	10.275	1	1874600			21392	1119	14400	14410	24710	24710					0.08499950083137264
KKLSRTQAS	9	Unmodified	_KKLSRTQAS_					0	0	0		ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8036193847656	2	509.803823	1017.59309	0.22319	0.00011378	-0.42853	-0.00021847	-0.20534	-0.00010468	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.69624	1	8820	8820		40.778	0	1	3453000			21393	1119	14400	14410	24711	24711					0.08499950083137264
KKLSRTQAS	9	Unmodified	_KKLSRTQAS_					0	0	0		ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8033142089844	2	509.803823	1017.59309	-0.37726	-0.00019233	0.1115	5.6841E-05	-0.26576	-0.00013549	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.69624	2	8398	8398;8590		40.778	7.9657	1	3415500			21394	1119	14400	14410	24712;24713	24712					0.08499950083137264
KKLSRTQAS	9	Unmodified	_KKLSRTQAS_					0	0	0		ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8037109375	2	509.803823	1017.59309	-1.541	-0.00078559	1.3366	0.0006814	-0.20435	-0.00010418	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.7932	1	8609	8609		25.574	0.12388	1	2989000			21395	1119	14400	14410	24714	24714					0.08499950083137264
KKLSRTQAS	9	Unmodified	_KKLSRTQAS_					0	0	0		ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.80352783203125	2	509.803823	1017.59309	-0.073626	-3.7535E-05	-0.14793	-7.5416E-05	-0.22156	-0.00011295	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.77244	2	10134	10122;10134		32.812	0	1	3087300			21396	1119	14400	14410	24715;24716	24716					0.08499950083137264
KKLSWVENY	9	Unmodified	_KKLSWVENY_					0	0	0		ENSG00000197724|ENST00000359246|PHF2;nc|ENSG00000006459|Q6ZMT4-2|KDM7A;ENSG00000006459|ENST00000397560|KDM7A	ENSG00000197724|ENST00000359246|PHF2;nc|ENSG00000006459|Q6ZMT4-2|KDM7A	nc|ENSG00000006459|Q6ZMT4-2|KDM7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.8182983398438	2	583.813856	1165.61316	-0.69234	-0.0004042	3.4649	0.0020229	2.7726	0.0016187	583.8157302830973	76.132	0.70881	76.53	76.198	76.907	0.39735					44	16	4	0	0	0	0.6204	1	8640	8640		45.972	1.8554	1	606990			21397	8193;700	14401	14411	24717	24717					0.036977010230884844
KKLVINMA	8	Unmodified	_KKLVINMA_					0	0	0			REV__ENST00000460978.1_1_3:41979458-41996251:-|nuORF	REV__ENST00000460978.1_1_3:41979458-41996251:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.787109375	2	458.786056	915.557558	1.7438	0.00080003	1.1153	0.0005117	2.8591	0.0013117	458.7865715116249	93.096	4.333	93.035	92.463	96.796	-0.061432					233	102	5	0	0	0	0.89457	1	9869	9869		37.028	5.0736	1	18947000	+		21398	27019	14402	14412	24718	24718					0.09640196301756987
KKLVKKHSK	9	Unmodified	_KKLVKKHSK_					0	0	0			REV__nc|ENSG00000107669|O95260-2|ATE1	REV__nc|ENSG00000107669|O95260-2|ATE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.228271484375	2	548.371675	1094.7288	1.0714	0.00058752	2.9821	0.0016353	4.0535	0.0022228	548.3731723776325	34.329	0.84913	34.634	34.324	35.173	0.30494					51	20	3	0	0	0	0.20789	1	2519	2519		16.473	8.7829	1	548470	+		21399	17669	14403	14413	24719	24719					0.18522269664595115
KKLVPLLKKM	10	Unmodified	_KKLVPLLKKM_					0	0	0			REV__ENST00000261439.8_1_4:38097591-38097624:+|nuORF	REV__ENST00000261439.8_1_4:38097591-38097624:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3796997070312	2	599.409412	1196.80427	0.97245	0.0005829	0.47861	0.00028688	1.4511	0.00086978	599.4092716225306	103.3	0.22647	103.48	103.32	103.54	0.18297					6	5	2	0	0	0	0.37624	1	10909	10909		29.15	15.012	1	41754	+		21400	24391	14404	14414	24720	24720					0.21374110800661583
KKLVVKGG	8	Unmodified	_KKLVVKGG_					0	0	0		ENSG00000116251|ENST00000234875|RPL22;chr1:6197756-6199565|56|38.45|0.37|6.7|-|0|RPL22,None|1	ENSG00000116251|ENST00000234875|RPL22	ENSG00000116251|ENST00000234875|RPL22	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	414.7617492675781	2	414.786913	827.559273	-1.9064	-0.00079073	-2.251	-0.0009337	-4.1574	-0.0017244	414.7858623730706	88.225	0.44685	88.395	88.169	88.615	0.16923					13	10	2	0	0	0	0.4196	1	8677	8677		28.254	20.564	1	58971			21401	2910	14405	14415	24721	24721					0.1385957338204662
KKLWKELEQ	9	Unmodified	_KKLWKELEQ_					0	0	0			REV__ENST00000546313.1_1_11:114167278-114168881:+|nuORF	REV__ENST00000546313.1_1_11:114167278-114168881:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.58050537109375	3	401.236163	1200.68666	-0.14488	-5.8132E-05	-2.2103	-0.00088686	-2.3552	-0.00094499	401.23522551616935	20.733	0.51884	20.104	19.942	20.461	-0.6296					25	12	3	0	0	0	0.20789	1	697	697		51.193	0	1	94186	+		21402	21313	14406	14416	24722	24722					0.09434249465562061
KKLYRKHF	8	Unmodified	_KKLYRKHF_					0	0	0			REV__ENSG00000105397|ENST00000525621|TYK2	REV__ENSG00000105397|ENST00000525621|TYK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3408813476562	2	560.342918	1118.67128	-1.4185	-0.00079484	-3.1237	-0.0017504	-4.5422	-0.0025452	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.87276	1	12724	12724		29.842	4.2675	1	4071000	+		21403	17535	14407	14417	24723	24723					0.11669427459014514
KKMKAYLILM	10	Unmodified	_KKMKAYLILM_					0	0	0			REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8689575195312	2	619.871805	1237.72906	-0.30632	-0.00018988	-3.8224	-0.0023694	-4.1287	-0.0025593	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.84112	1	9949	9949		37.159	3.6435	1	2103100	+		21404	21226	14408	14418	24724	24724					0.11970185277914425
KKMTLRVW	8	Unmodified	_KKMTLRVW_					0	0	0			REV__ENSG00000126107|ENST00000372172|HECTD3	REV__ENSG00000126107|ENST00000372172|HECTD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3187866210938	2	531.318054	1060.62156	0.23787	0.00012639	1.1544	0.00061336	1.3923	0.00073974	531.3183123814076	94.878	1.4608	95.298	94.89	96.35	0.41963					101	35	4	0	0	0	0.85277	1	11379	11379		25.45	1.9275	1	2093500	+		21405	18696	14409	14419	24725	24725					0.0936697645872755
KKMTRTKR	8	Unmodified	_KKMTRTKR_					0	0	0		ENST00000309964.8_1_4:56342137-56348912:-|nuORF	ENST00000309964.8_1_4:56342137-56348912:-|nuORF	ENST00000309964.8_1_4:56342137-56348912:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.826904296875	2	524.824035	1047.63352	1.2413	0.00065145	4.0977	0.0021506	5.339	0.002802	524.8261082044575	99.092	3.5228	99.14	98.41	101.93	0.047852					344	82	7	0	0	0	0.85277	1	10690	10690		25.45	1.2474	1	29910000			21406	9902	14410	14420	24726	24726					0.11160593201907432
KKNASTVVVSD	11	Unmodified	_KKNASTVVVSD_					0	0	0		ENSG00000204569|ENST00000376511|PPP1R10	ENSG00000204569|ENST00000376511|PPP1R10	ENSG00000204569|ENST00000376511|PPP1R10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.319580078125	2	574.319502	1146.62445	0.59155	0.00033974	-0.58489	-0.00033592	0.0066607	3.8253E-06	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.65746	1	9628	9628		37.812	2.6595	1	1777600			21407	8460	14411	14421	24727	24727					0.05700478326571101
KKNEKRRRKN	10	Unmodified	_KKNEKRRRKN_					0	0	0		ENST00000253233.5_1_12:123741426-123741600:+|nuORF	ENST00000253233.5_1_12:123741426-123741600:+|nuORF	ENST00000253233.5_1_12:123741426-123741600:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.9482421875	3	452.948009	1355.8222	-0.96185	-0.00043567	1.8047	0.00081744	0.84286	0.00038177	452.94875082747876	107.72	0.72105	107.72	107.11	107.83	0					47	17	3	0	0	0	0.86151	1	11211	11211		15.333	2.3756	1	5992100			21408	9316	14412	14422	24728	24728					0.15851962099736738
KKNETKKSN	9	Unmodified	_KKNETKKSN_					0	0	0		ENST00000262971.2_1_19:4038003-4038114:+|nuORF	ENST00000262971.2_1_19:4038003-4038114:+|nuORF	ENST00000262971.2_1_19:4038003-4038114:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8056640625	2	538.806562	1075.59857	-1.7158	-0.0009245	1.9508	0.0010511	0.23494	0.00012659	538.8077132058876	90.429	2.6922	90.899	89.762	92.454	0.47068					154	66	4	0	0	0	0.78124	1	10703	10703		30.318	3.5216	1	808590			21409	9452	14413	14423	24729	24729					0.06379628874969967
KKNFLTFRP	9	Unmodified	_KKNFLTFRP_					0	0	0			REV__ENSG00000186075|ENST00000348931|ZPBP2	REV__ENSG00000186075|ENST00000348931|ZPBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8430786132812	2	575.840208	1149.66586	0.61103	0.00035186	4.0503	0.0023323	4.6613	0.0026842	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.77696	1	9346	9346		31.53	4.8369	1	6623700	+		21410	22819	14414	14424	24730	24730					0.09701703876544343
KKNGRGLES	9	Unmodified	_KKNGRGLES_					0	0	0		chr2:43132480-43137613|16|13.5|0.0|20.36|-|0|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|6	chr2:43132480-43137613|16|13.5|0.0|20.36|-|0|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|6	chr2:43132480-43137613|16|13.5|0.0|20.36|-|0|TE_info:L2a,L2a_dup18760,L2,LINE,donor,+,43137613,43137984|LINC02580,None|6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7801208496094	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.7932	1	8394	8394		26.693	2.4902	1	569520			21411	339	14415	14425	24731	24731					0.05187090532001548
KKNKGKTDN	9	Unmodified	_KKNKGKTDN_					0	0	0			REV__ENSG00000278311|ENST00000613102|GGNBP2	REV__ENSG00000278311|ENST00000613102|GGNBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7935180664062	2	516.793455	1031.57236	-0.047501	-2.4548E-05	0.082016	4.2386E-05	0.034515	1.7837E-05	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.77244	1	8977	8977		32.812	2.4947	1	692890	+		21412	24034	14416	14426	24732	24732					0.05783359703491442
KKNKKKKK	8	Unmodified	_KKNKKKKK_					0	0	0			REV__chr3:101161277-101681096|22|484.59|0.0|25.53|-|1|TE_info:AluSq2,AluSq2_dup11265,Alu,SINE,acceptor,-,101161247,101161277|None,RPL24|3	REV__chr3:101161277-101681096|22|484.59|0.0|25.53|-|1|TE_info:AluSq2,AluSq2_dup11265,Alu,SINE,acceptor,-,101161247,101161277|None,RPL24|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.3651733398438	2	515.366393	1028.71823	3.0895	0.0015922	-2.8503	-0.0014689	0.23922	0.00012328	515.3649456454685	109.06	0.4231	109.03	108.79	109.21	-0.029381					33	15	3	0	0	0	0.86906	1	12105	12105		8.2313	0.54101	1	2999800	+		21413	15793	14417	14427	24733	24733					0.20502287010162945
KKNKKKKK	8	Unmodified	_KKNKKKKK_					0	0	0			REV__chr3:101161277-101681096|22|484.59|0.0|25.53|-|1|TE_info:AluSq2,AluSq2_dup11265,Alu,SINE,acceptor,-,101161247,101161277|None,RPL24|3	REV__chr3:101161277-101681096|22|484.59|0.0|25.53|-|1|TE_info:AluSq2,AluSq2_dup11265,Alu,SINE,acceptor,-,101161247,101161277|None,RPL24|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.3656616210938	2	515.366393	1028.71823	0.80564	0.0004152	-0.65283	-0.00033645	0.15281	7.8753E-05	515.366087242878	109.05	0.38199	109.08	108.85	109.24	0.033096					40	17	3	0	0	0	0.83058	2	11986	11979;11986		12.959	0.75233	1	3407000	+		21414	15793	14417	14427	24734;24735	24735					0.20502287010162945
KKNKKKKK	8	Unmodified	_KKNKKKKK_					0	0	0			REV__chr3:101161277-101681096|22|484.59|0.0|25.53|-|1|TE_info:AluSq2,AluSq2_dup11265,Alu,SINE,acceptor,-,101161247,101161277|None,RPL24|3	REV__chr3:101161277-101681096|22|484.59|0.0|25.53|-|1|TE_info:AluSq2,AluSq2_dup11265,Alu,SINE,acceptor,-,101161247,101161277|None,RPL24|3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	515.366393	1028.71823	0.80564	0.0004152	-0.65283	-0.00033645	0.15281	7.8753E-05	515.366087242878	109.05	0.38199	109.08	108.85	109.24	0.033096	-0.0036915	0.0017596	NaN	12.959	40	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3407000	+		21415	15793	14417	14427							0.20502287010162945
KKNKKKKK	8	Unmodified	_KKNKKKKK_					0	0	0			REV__chr3:101161277-101681096|22|484.59|0.0|25.53|-|1|TE_info:AluSq2,AluSq2_dup11265,Alu,SINE,acceptor,-,101161247,101161277|None,RPL24|3	REV__chr3:101161277-101681096|22|484.59|0.0|25.53|-|1|TE_info:AluSq2,AluSq2_dup11265,Alu,SINE,acceptor,-,101161247,101161277|None,RPL24|3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	515.366393	1028.71823	5.342	0.0027531	-4.9707	-0.0025617	0.37133	0.00019137	515.3639351879943	109.05	0.3482	109.14	108.93	109.28	0.090057	0.059366	-0.002691	NaN	12.959	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	928010	+		21416	15793	14417	14427							0.20502287010162945
KKNKKVESA	9	Unmodified	_KKNKKVESA_					0	0	0		ENST00000469412.5_1_21:32585686-32624433:-|nuORF;nc|ENSG00000156299|Q13009-2|TIAM1;ENSG00000156299|ENST00000541036|TIAM1	ENST00000469412.5_1_21:32585686-32624433:-|nuORF	ENST00000469412.5_1_21:32585686-32624433:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3139038085938	2	516.314023	1030.61349	-1.5618	-0.0008064	1.1232	0.00057995	-0.4386	-0.00022645	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.7932	1	10466	10466		25.574	0	1	66055000			21417	5373	14418	14428	24736	24736					0.0994112074295117
KKNKLKKCF	9	Unmodified	_KKNKLKKCF_					0	0	0			REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8540649414062	2	568.852261	1135.68997	-1.1637	-0.000662	2.7566	0.0015681	1.5929	0.0009061	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.78058	2	11165	11047;11165		30.504	3.7075	1	50786000	+		21418	24927	14419	14429	24737;24738	24738					0.12755221038560194
KKNKLKKCF	9	Unmodified	_KKNKLKKCF_					0	0	0			REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.8531494140625	2	568.852261	1135.68997	2.887	0.0016423	-1.4583	-0.00082954	1.4287	0.00081274	568.8513377958367	102.33	3.4335	102.28	101.79	105.22	-0.047005					328	82	6	0	0	0	0.72402	6	11169	11169;11217;11241;11289;11338;11410		38.806	12.01	1	53482000	+		21419	24927	14419	14429	24739;24740;24741;24742;24743;24744	24739					0.12755221038560194
KKNKLKKCF	9	Unmodified	_KKNKLKKCF_					0	0	0			REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.853271484375	2	568.852261	1135.68997	0.52259	0.00029728	0.88949	0.00050599	1.4121	0.00080327	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.62081	1	10752	10752		45.952	3.5558	1	84800000	+		21420	24927	14419	14429	24745	24745					0.12755221038560194
KKNKLKKCF	9	Unmodified	_KKNKLKKCF_					0	0	0			REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8536987304688	2	568.852261	1135.68997	0.87008	0.00049495	0.54687	0.00031109	1.417	0.00080604	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.62081	1	11009	11009		45.952	12.436	1	78933000	+		21421	24927	14419	14429	24746	24746					0.12755221038560194
KKNKLKKCF	9	Unmodified	_KKNKLKKCF_					0	0	0			REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8543701171875	2	568.852261	1135.68997	-1.3907	-0.00079112	2.8189	0.0016035	1.4282	0.00081242	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.77546	2	10944	10799;10944		31.955	4.0726	1	72465000	+		21422	24927	14419	14429	24747;24748	24748					0.12755221038560194
KKNKSKKIVH	10	Unmodified	_KKNKSKKIVH_					0	0	0			REV__nc|ENSG00000178053|P58340-2|MLF1	REV__nc|ENSG00000178053|P58340-2|MLF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.9295959472656	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.84816	2	3629	3492;3629		17.468	4.1069	1	2526100	+		21423	22250	14420	14430	24749;24750	24750					0.17569039722025082
KKNKSKKIVH	10	Unmodified	_KKNKSKKIVH_					0	0	0			REV__nc|ENSG00000178053|P58340-2|MLF1	REV__nc|ENSG00000178053|P58340-2|MLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9295959472656	3	403.931185	1208.77173	-1.8895	-0.00076324	-2.2243	-0.00089846	-4.1138	-0.0016617	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.888	1	3624	3624		11.097	0.99287	1	2300300	+		21424	22250	14420	14430	24751	24751					0.17569039722025082
KKNLKKFRY	9	Unmodified	_KKNLKKFRY_					0	0	0		ENST00000496441.5_1_2:174219691-174228743:+|nuORF;nc|ENSG00000144354|Q9BWT1-4|CDCA7;nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;ENSG00000144354|ENST00000306721|CDCA7	ENST00000496441.5_1_2:174219691-174228743:+|nuORF	ENST00000496441.5_1_2:174219691-174228743:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.9222717285156	3	408.92403	1223.75026	-0.18603	-7.607E-05	-4.0259	-0.0016463	-4.2119	-0.0017224	408.9223182552884	104.73	3.6152	104.72	103.66	107.27	-0.014809					241	85	5	0	0	0	0.7932	1	11309	11309		19.104	0	1	2991100			21425	12784	14421	14431	24752	24752					0.14733654693304743
KKNLRYDS	8	Unmodified	_KKNLRYDS_					0	0	0			REV__ENST00000441447.1_1_1:35734647-35790997:+|nuORF	REV__ENST00000441447.1_1_1:35734647-35790997:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2808837890625	2	512.282723	1022.55089	1.0087	0.00051672	-4.3045	-0.0022051	-3.2958	-0.0016884	512.2804694821883	84.339	1.6085	84.269	83.63	85.239	-0.069313					64	36	2	0	0	0	0.89962	1	8642	8642		38.806	4.6336	1	101990	+		21426	26757	14422	14432	24753	24753					0.040519746747463614
KKNLRYDS	8	Unmodified	_KKNLRYDS_					0	0	0			REV__ENST00000441447.1_1_1:35734647-35790997:+|nuORF	REV__ENST00000441447.1_1_1:35734647-35790997:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	512.282723	1022.55089	1.0087	0.00051672	-4.3045	-0.0022051	-3.2958	-0.0016884	512.2804694821883	84.339	1.6085	84.269	83.63	85.239	-0.069313	-0.070899	-0.0013075	NaN	38.806	64	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101990	+		21427	26757	14422	14432							0.040519746747463614
KKNLRYDS	8	Unmodified	_KKNLRYDS_					0	0	0			REV__ENST00000441447.1_1_1:35734647-35790997:+|nuORF	REV__ENST00000441447.1_1_1:35734647-35790997:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	512.282723	1022.55089	0.23795	0.0001219	-3.2286	-0.001654	-2.9907	-0.0015321	512.2809386956408	84.377	1.6991	84.436	83.454	85.153	0.05925	0.095742	-0.00020522	NaN	38.806	66	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119740	+		21428	26757	14422	14432							0.040519746747463614
KKNLRYDS	8	Unmodified	_KKNLRYDS_					0	0	0			REV__ENST00000441447.1_1_1:35734647-35790997:+|nuORF	REV__ENST00000441447.1_1_1:35734647-35790997:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	512.282723	1022.55089	-0.34669	-0.0001776	-2.8202	-0.0014447	-3.1669	-0.0016223	512.2812498667462	84.136	1.4593	84.312	83.547	85.006	0.17561	-0.028485	0.00021323	NaN	38.806	59	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107970	+		21429	26757	14422	14432							0.040519746747463614
KKNLRYDS	8	Unmodified	_KKNLRYDS_					0	0	0			REV__ENST00000441447.1_1_1:35734647-35790997:+|nuORF	REV__ENST00000441447.1_1_1:35734647-35790997:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	512.282723	1022.55089	-1.4501	-0.00074284	-1.4531	-0.00074438	-2.9031	-0.0014872	512.2819043185715	84.203	1.8699	84.344	83.616	85.486	0.14095	0.0036422	0.001614	NaN	38.806	75	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105380	+		21430	26757	14422	14432							0.040519746747463614
KKNLVDPFV	9	Unmodified	_KKNLVDPFV_					0	0	0		nc|ENSG00000135636|O75923-3|DYSF;nc|ENSG00000135636|O75923-9|DYSF;nc|ENSG00000135636|O75923|DYSF;nc|ENSG00000135636|O75923-14|DYSF;nc|ENSG00000135636|O75923-6|DYSF;nc|ENSG00000135636|O75923-12|DYSF;nc|ENSG00000135636|O75923-5|DYSF;nc|ENSG00000135636|O75923-11|DYSF;nc|ENSG00000135636|O75923-4|DYSF;nc|ENSG00000135636|O75923-10|DYSF;nc|ENSG00000135636|O75923-2|DYSF;nc|ENSG00000135636|O75923-8|DYSF;nc|ENSG00000135636|O75923-7|DYSF;ENSG00000135636|ENST00000410020|DYSF;nc|ENSG00000135636|O75923-15|DYSF;nc|ENSG00000138119|Q9NZM1-5|MYOF;nc|ENSG00000138119|Q9NZM1-2|MYOF;nc|ENSG00000138119|Q9NZM1-6|MYOF;nc|ENSG00000138119|Q9NZM1-3|MYOF;ENSG00000138119|ENST00000359263|MYOF;nc|ENSG00000138119|Q9NZM1-8|MYOF;nc|ENSG00000138119|Q9NZM1-7|MYOF	nc|ENSG00000135636|O75923-3|DYSF;nc|ENSG00000138119|Q9NZM1-5|MYOF	nc|ENSG00000138119|Q9NZM1-5|MYOF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2930297851562	2	530.313492	1058.61243	-0.034297	-1.8188E-05	-1.7192	-0.00091171	-1.7535	-0.00092989	530.3111682570111	92.3	1.3308	92.37	91.764	93.095	0.06987					43	30	2	0	0	0	0.20789	1	9475	9475		30.504	0	1	77338			21431	4041;4274	14423	14433	24754	24754					0.08546906374044738
KKNNKKPQKSL	11	Unmodified	_KKNNKKPQKSL_					0	0	0		ENST00000524293.1_1_8:27633031-27634707:+|nuORF;ENSG00000171320|ENST00000305188|ESCO2	ENST00000524293.1_1_8:27633031-27634707:+|nuORF	ENST00000524293.1_1_8:27633031-27634707:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.27301025390625	3	438.273499	1311.79867	-1.4635	-0.00064141	0.29289	0.00012837	-1.1706	-0.00051305	438.27353644756727	106.01	0.81467	106.16	105.83	106.65	0.14843					89	19	6	0	0	0	0.72374	1	11367	11367		27.644	0	1	14795000			21432	6659	14424	14434	24755	24755					0.1552410354256608
KKNNKKSCV	9	Unmodified	_KKNNKKSCV_					0	0	0			REV__ENST00000524293.1_1_8:27633031-27634707:+|nuORF	REV__ENST00000524293.1_1_8:27633031-27634707:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8273315429688	2	524.800226	1047.5859	-1.5343	-0.00080518	1.198	0.0006287	-0.33627	-0.00017647	524.7999665174253	99.084	0.41128	99.269	98.987	99.399	0.18582					13	9	2	0	0	0	0.20789	1	10231	10231		56.721	24.766	1	134660	+		21433	21724	14425	14435	24756	24756					0.06400894211060404
KKNNLRDWLRV	11	Unmodified	_KKNNLRDWLRV_					0	0	0		ENSG00000116251|ENST00000234875|RPL22;ENSG00000163584|ENST00000295830|RPL22L1	ENSG00000116251|ENST00000234875|RPL22	ENSG00000116251|ENST00000234875|RPL22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.2823181152344	3	481.284398	1440.83137	-0.77355	-0.0003723	-1.9361	-0.00093182	-2.7097	-0.0013041	481.28339459501956	101.39	1.951	101.6	100.24	102.19	0.2058					116	46	4	0	0	0	0.77205	1	10671	10671		17.167	3.0807	1	699120			21434	2910	14426	14436	24757	24757					0.12858310665387762
KKNNLRDWLRV	11	Unmodified	_KKNNLRDWLRV_					0	0	0		ENSG00000116251|ENST00000234875|RPL22;ENSG00000163584|ENST00000295830|RPL22L1	ENSG00000116251|ENST00000234875|RPL22	ENSG00000116251|ENST00000234875|RPL22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.2831726074219	3	481.284398	1440.83137	-0.7743	-0.00037266	-1.2681	-0.00061031	-2.0424	-0.00098297	481.2837549542837	102.74	2.1503	102.93	102.14	104.29	0.19484					128	53	4	0	0	0	0.74771	1	10814	10814		22.562	1.5294	1	1226400			21435	2910	14426	14436	24758	24758					0.12858310665387762
KKNPLWLLYPF	11	Unmodified	_KKNPLWLLYPF_					0	0	0			REV__ENST00000322054.9_1_2:31489890-31490169:+|nuORF	REV__ENST00000322054.9_1_2:31489890-31490169:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.4197998046875	3	473.611341	1417.81219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.071	1	25.071	24.571	25.571	0								0	0	0	0.56276	1	891	891		25.126	7.9592	1		+		21436	25021	14427	14437	24759	24759					0.11999961321794217
KKNQHTKIH	9	Unmodified	_KKNQHTKIH_					0	0	0			REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.329833984375	2	567.330539	1132.64652	-0.51077	-0.00028978	-0.70581	-0.00040043	-1.2166	-0.0006902	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.7932	1	9156	9156		26.693	0	1	11042000	+		21437	21859	14428	14438	24760	24760					0.08550747585650242
KKNRLSLKF	9	Unmodified	_KKNRLSLKF_					0	0	0		ENSG00000162607|ENST00000339950|USP1	ENSG00000162607|ENST00000339950|USP1	ENSG00000162607|ENST00000339950|USP1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3640747070312	2	567.361308	1132.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.109	1	67.237	66.737	67.737	0.12748								0	0	0	0.31117	1	5986	5986		26.693	5.746	1				21438	5704	14429	14439	24761	24761					0.14701679284939928
KKNRQRFGAM	10	Unmodified	_KKNRQRFGAM_					0	0	0			REV__ENST00000347529.7_1_1:29338378-29342228:+|nuORF	REV__ENST00000347529.7_1_1:29338378-29342228:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.3460083007812	2	618.343123	1234.67169	2.5351	0.0015676	1.9078	0.0011797	4.4429	0.0027472	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.74274	1	10552	10552		42.396	3.1433	1	980120	+		21439	25323	14430	14440	24762	24762					0.06374479116584553
KKNRRIMHYKR	11	Unmodified	_KKNRRIMHYKR_					0	0	0			REV__ENST00000461454.1_1_2:175252452-175260304:-|nuORF	REV__ENST00000461454.1_1_2:175252452-175260304:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.63372802734375	3	510.636778	1528.8885	-1.5803	-0.00080697	-2.0366	-0.00104	-3.617	-0.001847	510.6349315278733	104.49	1.6457	104.58	103.87	105.52	0.093857					135	40	4	0	0	0	0.85873	1	10974	10974		5.4129	0.27055	1	478750	+		21440	27031	14431	14441	24763	24763					0.1452145467014816
KKNSEMKLRI	10	Unmodified	_KKNSEMKLRI_					0	0	0		ENST00000519098.5_3_8:102792174-102803098:-|nuORF;ENST00000523923.5_3_8:102792174-102864859:-|nuORF;ENST00000524137.5_3_8:102792174-102801096:-|nuORF	ENST00000519098.5_3_8:102792174-102803098:-|nuORF	ENST00000519098.5_3_8:102792174-102803098:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.8709716796875	2	623.86864	1245.72273	-0.065769	-4.1031E-05	2.9602	0.0018468	2.8944	0.0018057	623.8703810158217	104.89	2.4155	104.89	104.43	106.84	0					131	56	4	0	0	0	0.8651	1	10816	10816		25.574	0	1	1348200			21441	13128	14432	14442	24764	24764					0.10969383370775176
KKNSQKKAS	9	Unmodified	_KKNSQKKAS_					0	0	0		ENST00000359660.9_1_5:107195069-107195318:-|nuORF	ENST00000359660.9_1_5:107195069-107195318:-|nuORF	ENST00000359660.9_1_5:107195069-107195318:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8036804199219	2	509.803823	1017.59309	0.22319	0.00011378	-0.42853	-0.00021847	-0.20534	-0.00010468	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.64555	2	8759	8654;8759		44.377	1.5129	1	3453000			21442	10434	14433	14443	24765;24766	24766					0.08499950083137264
KKNTESGLSAL	11	Unmodified	_KKNTESGLSAL_					0	0	0			REV__ENST00000481652.1_1_1:114242829-114248598:-|nuORF	REV__ENST00000481652.1_1_1:114242829-114248598:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3193359375	2	574.319502	1146.62445	-0.44784	-0.0002572	0.5081	0.00029181	0.060262	3.461E-05	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.7434	1	9508	9508		23.523	0	1	1099700	+		21443	18227	14434	14444	24767	24767					0.057004783265938386
KKNWRKAP	8	Unmodified	_KKNWRKAP_					0	0	0		nc|ENSG00000074803|Q13621-3|SLC12A1;ENSG00000074803|ENST00000380993|SLC12A1	nc|ENSG00000074803|Q13621-3|SLC12A1	nc|ENSG00000074803|Q13621-3|SLC12A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.2823486328125	2	514.311618	1026.60868	0.3053	0.00015702	-2.4479	-0.001259	-2.1426	-0.001102	514.3102538952755	48.525	1.0488	49.429	49.085	50.133	0.90424					34	25	2	0	0	0	0.4196	1	4756	4756		25.45	9.8084	1	252420			21444	1315	14435	14445	24768	24768					0.0964428139084248
KKPAEKPAM	9	Unmodified	_KKPAEKPAM_					0	0	0			REV__ENST00000465409.1_1_10:104183185-104183703:-|nuORF	REV__ENST00000465409.1_1_10:104183185-104183703:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.3062744140625	2	500.28642	998.558287	-0.030885	-1.5452E-05	-2.357	-0.0011792	-2.3879	-0.0011946	500.78678587646493	16.607	0.13711	16.12	16.052	16.189	-0.48718					4	2	2	0	0	0	0.20789	1	149	149		71.296	17.944	1	22541	+		21445	17681	14436	14446	24769	24769					0.05894990950821466
KKPAVILILVL	11	Unmodified	_KKPAVILILVL_					0	0	0			REV__ENSG00000163293|ENST00000295461|NIPAL1	REV__ENSG00000163293|ENST00000295461|NIPAL1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	603.8495483398438	2	603.931035	1205.84752	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.329	1	28.35	27.85	28.85	0.021948								0	0	0	0.56276	1	1161	1161		10.265	4.3441	1		+		21446	20894	14437	14447	24770	24770					0.25282623849602714
KKPAVVTLML	10	Unmodified	_KKPAVVTLML_					0	0	0			REV__chr14:46855154-46874045|14|21.43|0.0|21.03|-|0|MDGA2,MDGA2|1	REV__chr14:46855154-46874045|14|21.43|0.0|21.03|-|0|MDGA2,MDGA2|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.35205078125	2	550.34902	1098.68349	-0.13237	-7.2852E-05	3.5366	0.0019463	3.4042	0.0018735	550.3508827027325	18.018	1.0361	17.535	17.035	18.071	-0.48256					58	22	4	0	0	0	0.86763	1	303	303		26.693	3.6504	1	1122100	+		21447	15594	14438	14448	24771	24771					0.1380928308719831
KKPCKNLMNTL	11	Unmodified	_KKPCKNLMNTL_					0	0	0		nc|ENSG00000174485|Q7Z401|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A;ENSG00000174485|ENST00000443035|DENND4A;ENST00000568515.1_1_15:66007788-66048788:-|nuORF	nc|ENSG00000174485|Q7Z401|DENND4A	nc|ENSG00000174485|Q7Z401|DENND4A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	645.8842163085938	2	645.35705	1288.69955	1.6035	0.0010348	-1.5454	-0.00099732	0.058108	3.75E-05	645.3559126475778	105.51	1.0262	105.67	105.17	106.2	0.15925					48	26	2	0	0	0	0.17376	1	11295	11295		40.058	17.479	1	358140			21448	6939	14439	14449	24772	24772					0.06674621261799984
KKPCTPAP	8	Unmodified	_KKPCTPAP_					0	0	0		ENSG00000127418|ENST00000510644|FGFRL1	ENSG00000127418|ENST00000510644|FGFRL1	ENSG00000127418|ENST00000510644|FGFRL1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.2348327636719	2	421.233656	840.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.686	1	30.798	30.298	31.298	0.11198								0	0	0	0.29755	1	1371	1371		24.203	2.5004	1				21449	3496	14440	14450	24773	24773					0.026150748251893674
KKPDPASLR	9	Unmodified	_KKPDPASLR_					0	0	0		ENSG00000005194|ENST00000394391|CIAPIN1;nc|ENSG00000005194|Q6FI81-3|CIAPIN1;nc|ENSG00000005194|Q6FI81-2|CIAPIN1	ENSG00000005194|ENST00000394391|CIAPIN1	ENSG00000005194|ENST00000394391|CIAPIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3000793457031	2	506.300916	1010.58728	-1.5945	-0.00080728	1.9293	0.00097679	0.33481	0.00016952	506.30185711798276	96.376	1.2072	96.579	96.02	97.227	0.20241					70	27	3	0	0	0	0.7932	1	9846	9846		26.693	3.1702	1	332450			21450	677	14441	14451	24774	24774					0.0824085157147465
KKPELLLPV	9	Unmodified	_KKPELLLPV_					0	0	0		ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8112182617188	2	518.841885	1035.66922	1.9978	0.0010365	2.1503	0.0011157	4.1481	0.0021522	519.3440038711716	99.901	0.1158	100.26	100.2	100.32	0.36292					4	2	2	0	0	0	0.20789	1	12126	12126		35.618	0	1	56610			21451	7840	14442	14452	24775	24775					0.1528095393057356
KKPFEVHWRKH	11	Unmodified	_KKPFEVHWRKH_					0	0	0		ENST00000451982.6_2_3:195408438-195423327:+|nuORF;ENST00000597034.5_1_3:195410622-195413486:+|nuORF;ENST00000455183.1_1_3:195408438-195412772:+|nuORF;ENST00000429897.5_1_3:195408438-195415535:+|nuORF;ENST00000445430.5_1_3:195408453-195410886:+|nuORF	ENST00000451982.6_2_3:195408438-195423327:+|nuORF	ENST00000451982.6_2_3:195408438-195423327:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.95037841796875	3	497.949239	1490.82589	-0.077729	-3.8705E-05	3.9151	0.0019495	3.8374	0.0019108	497.9511157857349	24.867	0.94643	24.539	24.025	24.972	-0.32825					56	20	4	0	0	0	0.71207	1	1213	1213		29.551	4.4248	1	643250			21452	11911	14443	14453	24776	24776					0.10010631873569764
KKPFEVHWRKH	11	Unmodified	_KKPFEVHWRKH_					0	0	0		ENST00000451982.6_2_3:195408438-195423327:+|nuORF;ENST00000597034.5_1_3:195410622-195413486:+|nuORF;ENST00000455183.1_1_3:195408438-195412772:+|nuORF;ENST00000429897.5_1_3:195408438-195415535:+|nuORF;ENST00000445430.5_1_3:195408453-195410886:+|nuORF	ENST00000451982.6_2_3:195408438-195423327:+|nuORF	ENST00000451982.6_2_3:195408438-195423327:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.9507751464844	3	497.949239	1490.82589	1.9027	0.00094744	1.7462	0.00086953	3.6489	0.001817	497.9500785966066	24.766	1.0222	24.252	23.746	24.768	-0.51365					66	22	5	0	0	0	0.72374	1	1227	1227		27.644	0.59661	1	639230			21453	11911	14443	14453	24777	24777					0.10010631873569764
KKPGMVLT	8	Unmodified	_KKPGMVLT_					0	0	0		ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2662353515625	2	437.264956	872.515359	1.7902	0.0007828	0.24809	0.00010848	2.0383	0.00089128	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.85277	1	821	821		25.45	0	1	738160			21454	7166	14444	14454	24778	24778					0.07400220893384812
KKPHQLKVW	9	Unmodified	_KKPHQLKVW_					0	0	0			REV__ENSG00000187815|ENST00000372706|ZFP69	REV__ENSG00000187815|ENST00000372706|ZFP69	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3547973632812	2	582.356025	1162.6975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.89	1	114.95	114.45	115.45	0.061073								0	0	0	0.33676	1	12272	12272		18.324	0.062328	1		+		21455	22952	14445	14455	24779	24779					0.12265696630493039
KKPIFLVLV	9	Unmodified	_KKPIFLVLV_					0	0	0		ENST00000504117.1_1_5:93752768-93812878:-|nuORF;nc|ENSG00000185261|Q8IV33-3|KIAA0825;nc|ENSG00000185261|Q8IV33|KIAA0825;ENSG00000185261|ENST00000682413|KIAA0825	ENST00000504117.1_1_5:93752768-93812878:-|nuORF	ENST00000504117.1_1_5:93752768-93812878:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.858642578125	2	528.862621	1055.71069	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.59	1	113.69	113.19	114.19	0.10217								0	0	0	0.36143	1	12183	12183		3.9852	0	1				21456	7695	14446	14456	24780	24780					0.18506134689869214
KKPIKVAP	8	Unmodified	_KKPIKVAP_					0	0	0			REV__ENSG00000146285|ENST00000369020|SCML4	REV__ENSG00000146285|ENST00000369020|SCML4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.8010559082031	2	440.802563	879.590573	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.832	1	21.204	20.704	21.704	-0.62835								0	0	0	0.30252	1	833	833		19.36	1.0356	1		+		21457	20006	14447	14457	24781	24781					0.1459614641612461
KKPKATKPKT	10	Unmodified	_KKPKATKPKT_					0	0	0			REV__ENSG00000124610|ENST00000244573|H1-1	REV__ENSG00000124610|ENST00000244573|H1-1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.8699951171875	2	563.868966	1125.72338	0.14373	8.1047E-05	-0.15246	-8.5965E-05	-0.0087223	-4.9182E-06	563.8689213355182	15.551	0.40457	15.609	15.469	15.873	0.057872					16	11	3	0	0	0	0.57924	1	49	49		51.193	13.685	1	158280	+		21458	18601	14448	14458	24782	24782					0.16554546082124943
KKPKAVAKNHS	11	Unmodified	_KKPKAVAKNHS_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.24700927734375	3	403.247173	1206.71969	-0.18602	-7.5014E-05	-0.48244	-0.00019454	-0.66847	-0.00026956	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.7342	1	11509	11509		17.167	0	1	12308000			21459	2943	14449	14459	24783	24783					0.12459876308253115
KKPKFVKIYD	10	Unmodified	_KKPKFVKIYD_					0	0	0			REV__nc|ENSG00000073712|Q96AC1-2|FERMT2	REV__nc|ENSG00000073712|Q96AC1-2|FERMT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.927734375	3	422.592058	1264.75434	-1.6666	-0.00070429	4.3892	0.0018548	2.7226	0.0011505	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.85633	1	4552	4552		21.686	2.4231	1	771770	+		21460	16677	14450	14460	24784	24784					0.13255699396381715
KKPKFVKIYD	10	Unmodified	_KKPKFVKIYD_					0	0	0			REV__nc|ENSG00000073712|Q96AC1-2|FERMT2	REV__nc|ENSG00000073712|Q96AC1-2|FERMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5926818847656	3	422.592058	1264.75434	1.8674	0.00078915	0.61077	0.00025811	2.4782	0.0010473	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.86151	1	4801	4801		15.333	0	1	997830	+		21461	16677	14450	14460	24785	24785					0.13255699396381715
KKPKVLKPEQE	11	Unmodified	_KKPKVLKPEQE_					0	0	0			REV__ENSG00000247746|ENST00000500968|USP51	REV__ENSG00000247746|ENST00000500968|USP51	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.93951416015625	3	441.938005	1322.79219	0.34627	0.00015303	3.6321	0.0016052	3.9784	0.0017582	441.9394808074078	56.501	1.1083	56.601	56.467	57.576	0.099186					113	51	3	0	0	0	0.77511	1	4812	4812		16.53	1.1967	1	679940	+		21462	23858	14451	14461	24786	24786					0.1437016559118547
KKPKYPPN	8	Unmodified	_KKPKYPPN_					0	0	0		ENSG00000141580|ENST00000392325|WDR45B;ENST00000574828.1_1_17:80584850-80606216:-|nuORF;ENST00000583470.1_1_17:30439049-30439436:-|nuORF	ENSG00000141580|ENST00000392325|WDR45B	ENSG00000141580|ENST00000392325|WDR45B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.2658386230469	2	486.287277	970.560001	-1.0156	-0.00049387	-3.8523	-0.0018733	-4.8679	-0.0023672	486.2849523200142	87.815	0.85247	87.868	87.427	88.28	0.053032					35	19	3	0	0	0	0.4196	1	8991	8991		40.573	12.69	1	75305			21463	4517	14452	14462	24787	24787					0.0735436803107632
KKPLGKMA	8	Unmodified	_KKPLGKMA_					0	0	0		ENSG00000150455|ENST00000392679|TIRAP;nc|ENSG00000150455|P58753-2|TIRAP;nc|ENSG00000150455|P58753-3|TIRAP	ENSG00000150455|ENST00000392679|TIRAP	ENSG00000150455|ENST00000392679|TIRAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7735900878906	2	436.772948	871.531344	-0.34986	-0.00015281	1.4315	0.00062523	1.0816	0.00047242	436.77383375696394	27.418	1.1225	27.379	27.041	28.164	-0.038523					45	25	2	0	0	0	0.82419	1	1310	1310		13.775	0	1	85606			21464	5065	14453	14463	24788	24788					0.0904392713028983
KKPLKKKPTPV	11	Unmodified	_KKPLKKKPTPV_					0	0	0		ENSG00000025796|ENST00000369002|SEC63	ENSG00000025796|ENST00000369002|SEC63	ENSG00000025796|ENST00000369002|SEC63	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	632.4296264648438	2	632.42919	1262.84383	-0.16111	-0.00010189	1.4498	0.00091687	1.2887	0.00081498	632.4298123182796	108.36	0.78529	108.31	108.01	108.8	-0.042404					66	29	3	0	0	0	0.75164	1	11813	11813		21.686	7.5486	1	4385300			21465	867	14454	14464	24789	24789					0.2229195407574025
KKPLKKKPTPV	11	Unmodified	_KKPLKKKPTPV_					0	0	0		ENSG00000025796|ENST00000369002|SEC63	ENSG00000025796|ENST00000369002|SEC63	ENSG00000025796|ENST00000369002|SEC63	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	632.428955078125	2	632.42919	1262.84383	0.9319	0.00058936	0.21544	0.00013625	1.1473	0.00072561	632.4290216403841	108.39	0.63701	108.47	108.17	108.81	0.084404					45	23	3	0	0	0	0.79584	1	11651	11651		12.207	2.501	1	3467900			21466	867	14454	14464	24790	24790					0.2229195407574025
KKPPCVGA	8	Unmodified	_KKPPCVGA_					0	0	0			REV__ENSG00000124107|ENST00000338380|SLPI	REV__ENSG00000124107|ENST00000338380|SLPI	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2257080078125	2	400.228374	798.442194	0.71326	0.00028547	-2.059	-0.00082406	-1.3457	-0.0005386	400.22763665740666	50.309	0.69075	51.154	50.934	51.625	0.84501					24	16	2	0	0	0	0.87276	1	4959	4959		29.842	9.3597	1	832990	+		21467	18557	14455	14465	24791	24791					0.03491092170770571
KKPPPSKEEL	10	Unmodified	_KKPPPSKEEL_					0	0	0		ENST00000532383.5_1_11:10821544-10823273:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2	ENST00000532383.5_1_11:10821544-10823273:-|nuORF	ENST00000532383.5_1_11:10821544-10823273:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.8276977539062	2	576.834788	1151.65502	-0.33529	-0.00019341	-1.8394	-0.001061	-2.1747	-0.0012545	576.8336410143114	63.832	0.84967	64.387	64.003	64.853	0.5545					42	19	3	0	0	0	0.82886	1	6913	6913		37.812	0.65241	1	270420			21468	2521	14456	14466	24792	24792					0.08526256711616043
KKPPPSKEEL	10	Unmodified	_KKPPPSKEEL_					0	0	0		ENST00000532383.5_1_11:10821544-10823273:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2	ENST00000532383.5_1_11:10821544-10823273:-|nuORF	ENST00000532383.5_1_11:10821544-10823273:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	576.834788	1151.65502	-1.1629	-0.0006708	-1.2099	-0.00069789	-2.3728	-0.0013687	576.8338285193759	63.965	0.90208	64.352	64.004	64.907	0.3868	-0.017386	0.00027381	NaN	37.812	46	20	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	232960			21469	2521	14456	14466							0.08526256711616043
KKPSITRN	8	Unmodified	_KKPSITRN_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28765869140625	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.86677	1	9881	9881		27.882	1.0861	1	50946000	+		21470	23147	14457	14467	24793	24793					0.08748582399982752
KKPSTLRK	8	Unmodified	_KKPSTLRK_					0	0	0		ENST00000399543.1_1_5:43042205-43042844:+|nuORF	ENST00000399543.1_1_5:43042205-43042844:+|nuORF	ENST00000399543.1_1_5:43042205-43042844:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.3134460449219	2	479.313826	956.613099	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.193	1	19.734	19.234	20.234	-0.4591								0	0	0	0.079421	1	614	614		68.787	5.4806	1				21471	11207	14458	14468	24794	24794					0.13305745813761405
KKPSVSDELM	10	Oxidation (M)	_KKPSVSDELM(Oxidation (M))_		KKPSVSDELM(1)		KKPSVSDELM(70)	0	0	1			REV__nc|ENSG00000137076|Q9Y490-2|TLN1	REV__nc|ENSG00000137076|Q9Y490-2|TLN1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2945556640625	2	575.294639	1148.57472	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.677	1	77.076	76.576	77.576	0.39969								0	0	0	0.35321	1	8710	8710		69.628	14.123	1		+		21472	19357	14459	14469	24795	24795		286			0.006380273262493574
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3079528808594	3	478.975788	1433.90553	-1.6535	-0.00079198	-1.1033	-0.00052846	-2.7568	-0.0013204	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.80813	1	3473	3473		9.6461	3.6451	1	252010	+		21473	23163	14460	14470	24796	24796					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.309326171875	3	478.975788	1433.90553	-1.6051	-0.0007688	-1.0482	-0.00050206	-2.6533	-0.0012709	478.9751768575692	49.706	2.3794	49.706	48.538	50.918	0					127	57	3	0	0	0	0.7896	2	3996	3996;4018		13.508	3.8618	1	134370	+		21474	23163	14460	14470	24797;24798	24797					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9732360839844	3	478.975788	1433.90553	-1.5624	-0.00074834	-1.026	-0.00049144	-2.5884	-0.0012398	479.30961963549026	52.606	1.2577	52.606	52.057	53.314	0					69	33	3	0	0	0	0.81892	1	4346	4346		8.0344	1.3747	1	125180	+		21475	23163	14460	14470	24799	24799					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9742431640625	3	478.975788	1433.90553	-1.5477	-0.00074132	-1.0231	-0.00049002	-2.5708	-0.0012313	479.3095821584732	53.8	1.0088	53.8	53.251	54.26	0					54	29	2	0	0	0	0.81892	1	4490	4490		8.0344	1.3747	1	89946	+		21476	23163	14460	14470	24800	24800					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9759521484375	3	478.975788	1433.90553	0.22007	0.00010541	-3.5834	-0.0017164	-3.3634	-0.001611	478.9740845349807	44.981	2.0928	44.958	43.729	45.822	-0.023079					123	48	4	0	0	0	0.81219	1	3597	3597		8.7993	0.39205	1	463950	+		21477	23163	14460	14470	24801	24801					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.30780029296875	3	478.975788	1433.90553	0.1614	7.7307E-05	-2.9471	-0.0014116	-2.7857	-0.0013343	478.974258997061	46.621	1.762	46.607	45.625	47.387	-0.013821					99	45	3	0	0	0	0.79476	1	3643	3643		12.433	6.734	1	179760	+		21478	23163	14460	14470	24802	24802					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97637939453125	3	478.975788	1433.90553	-0.59951	-0.00028715	-1.9641	-0.00094078	-2.5637	-0.0012279	479.30919988874916	53.475	3.0495	53.45	51.564	54.614	-0.02475					117	77	2	0	0	0	0.77803	1	4853	4853		15.921	7.5134	1	217940	+		21479	23163	14460	14470	24803	24803					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.30792236328125	3	478.975788	1433.90553	-0.13683	-6.554E-05	-1.9753	-0.00094612	-2.1121	-0.0010117	478.974750908379	57.254	1.3987	57.225	56.666	58.065	-0.02866					58	41	2	0	0	0	0.74771	1	5296	5296		22.562	12.915	1	137920	+		21480	23163	14460	14470	24804	24804					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3095703125	3	478.975788	1433.90553	-1.3068	-0.00062591	-1.2424	-0.00059507	-2.5492	-0.001221	478.9750986281663	49.151	3.7005	49.151	47.803	51.503	0.00016785					187	96	3	0	0	0	0.79716	1	4229	4229		11.932	0.47776	1	240410	+		21481	23163	14460	14470	24805	24805					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.30963134765625	3	478.975788	1433.90553	-0.90815	-0.00043498	-1.7541	-0.00084019	-2.6623	-0.0012752	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.79476	1	3485	3485		12.433	4.0256	1	368580	+		21482	23163	14460	14470	24806	24806					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.30999755859375	3	478.975788	1433.90553	-0.90026	-0.0004312	-1.5139	-0.0007251	-2.4141	-0.0011563	479.3094231457841	50.589	1.3321	50.619	49.948	51.28	0.029629					91	40	3	0	0	0	0.79476	2	3948	3948;3957		12.433	0	1	250790	+		21483	23163	14460	14470	24807;24808	24807					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9737548828125	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.815	1	45.831	45.331	46.331	0.015514								0	0	0	0.56276	1	3324	3324		18.531	5.0231	1		+		21484	23163	14460	14470	24809	24809					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97528076171875	3	478.975788	1433.90553	0.32204	0.00015425	-2.7165	-0.0013011	-2.3944	-0.0011469	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.80593	1	3903	3903		10.104	2.0695	1	307830	+		21485	23163	14460	14470	24810	24810					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3086242675781	3	478.975788	1433.90553	0.41435	0.00019846	-3.1102	-0.0014897	-2.6958	-0.0012912	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.81021	2	5217	5217;5231		9.2118	0.41249	1	131420	+		21486	23163	14460	14470	24811;24812	24811					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9771728515625	3	478.975788	1433.90553	-0.20548	-9.8418E-05	-2.506	-0.0012003	-2.7115	-0.0012987	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.81021	1	3294	3294		9.2118	1.1774	1	468190	+		21487	23163	14460	14470	24813	24813					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97491455078125	3	478.975788	1433.90553	-0.71901	-0.00034439	-1.8715	-0.00089638	-2.5905	-0.0012408	479.3092394614084	60.917	0.55768	60.925	60.553	61.11	0.0081177					45	21	3	0	0	0	0.79716	1	5288	5288		11.932	0	1	136290	+		21488	23163	14460	14470	24814	24814					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	478.975788	1433.90553	-1.4975	-0.00071725	-0.063556	-3.0442E-05	-1.561	-0.00074769	479.3104890681248	57.196	0.24366	57.196	57.06	57.304	0	0.15818	0.0024446	NaN	22.562	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37622	+		21489	23163	14460	14470							0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	478.975788	1433.90553	-0.88351	-0.00042318	-2.3959	-0.0011476	-3.2794	-0.0015707	478.9748311212157	60.536	0.59362	60.637	60.421	61.014	0.10082	-0.14378	-0.00040757	NaN	11.932	34	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	167730	+		21490	23163	14460	14470							0.20593698547577333
KKPVSQSLEF	10	Unmodified	_KKPVSQSLEF_					0	0	0		ENSG00000188994|ENST00000369577|ZNF292;nc|ENSG00000188994|O60281-2|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.7564697265625	2	581.826963	1161.63937	-2.0055	-0.0011669	1.4984	0.00087179	-0.50714	-0.00029507	581.8278907911255	58.698	0.58649	59.09	58.814	59.401	0.39209					31	13	3	0	0	0	0.37624	1	6153	6153		34.173	5.023	1	545300			21491	7979	14461	14471	24815	24815					0.06501970194585738
KKPVSQSLEF	10	Unmodified	_KKPVSQSLEF_					0	0	0		ENSG00000188994|ENST00000369577|ZNF292;nc|ENSG00000188994|O60281-2|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	581.826963	1161.63937	-0.8586	-0.00049956	0.90798	0.00052828	0.049375	2.8727E-05	581.8280439569751	58.932	0.5522	58.918	58.673	59.225	-0.013733	-0.073145	-0.0001314	NaN	34.173	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44045			21492	7979	14461	14471							0.06501970194585738
KKPVSQSLEF	10	Unmodified	_KKPVSQSLEF_					0	0	0		ENSG00000188994|ENST00000369577|ZNF292;nc|ENSG00000188994|O60281-2|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	581.826963	1161.63937	0.40731	0.00023698	0.5082	0.00029568	0.91551	0.00053267	581.8276289092909	58.986	0.48005	58.955	58.568	59.048	-0.030888	-0.036508	-0.0005966	NaN	34.173	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41861			21493	7979	14461	14471							0.06501970194585738
KKPVSQSLEF	10	Unmodified	_KKPVSQSLEF_					0	0	0		ENSG00000188994|ENST00000369577|ZNF292;nc|ENSG00000188994|O60281-2|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	ENSG00000188994|ENST00000369577|ZNF292	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	581.826963	1161.63937	-1.4392	-0.00083736	1.9093	0.0011109	0.47009	0.00027351	581.8280287925824	58.824	0.53136	58.858	58.604	59.136	0.033905	-0.13286	0.0010338	NaN	34.173	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50035			21494	7979	14461	14471							0.06501970194585738
KKPVVTEVRTP	11	Unmodified	_KKPVVTEVRTP_					0	0	0		nc|ENSG00000122870|Q9H694-2|BICC1;ENSG00000122870|ENST00000373886|BICC1	nc|ENSG00000122870|Q9H694-2|BICC1	nc|ENSG00000122870|Q9H694-2|BICC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3837280273438	2	627.382437	1252.75032	0.92716	0.00058169	-1.2273	-0.00076996	-0.30009	-0.00018827	627.3814833817243	111.89	0.64575	111.96	111.47	112.12	0.069542					69	19	4	0	0	0	0.73621	1	11997	11997		25.126	7.658	1	15643000			21495	3251	14462	14472	24816	24816					0.1340560990265658
KKQAENAISA	10	Unmodified	_KKQAENAISA_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2919311523438	2	530.293288	1058.57202	0.74166	0.0003933	-0.55232	-0.00029289	0.18935	0.00010041	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.73395	1	9263	9263		42.864	0.46813	1	2081200			21496	1733	14463	14473	24817	24817					0.04507939983614051
KKQAGEKK	8	Unmodified	_KKQAGEKK_					0	0	0			REV__nc|ENSG00000078687|Q9HCJ0-4|TNRC6C	REV__nc|ENSG00000078687|Q9HCJ0-4|TNRC6C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7822265625	2	458.782359	915.550165	-1.2533	-0.00057499	0.92739	0.00042547	-0.32591	-0.00014952	458.78277385971126	21.037	1.5776	21.082	20.679	22.257	0.045401					194	76	5	0	0	0	0.38235	1	558	558		94.006	0	1	7296300	+		21497	16769	14464	14474	24818	24818					0.08901180025713984
KKQALLVNHRF	11	Unmodified	_KKQALLVNHRF_					0	0	0		ENST00000540664.5_1_10:98721011-98721128:+|nuORF	ENST00000540664.5_1_10:98721011-98721128:+|nuORF	ENST00000540664.5_1_10:98721011-98721128:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.94427490234375	3	451.941973	1352.80409	-0.47573	-0.000215	3.4608	0.0015641	2.9851	0.0013491	451.9434025086026	55.358	2.0218	55.331	54.102	56.123	-0.027275					115	58	3	0	0	0	0.74771	1	4880	4880		22.562	3.2989	1	431630			21498	13502	14465	14475	24819	24819					0.1417982712500816
KKQASRRKHKS	11	Unmodified	_KKQASRRKHKS_					0	0	0		ENST00000560184.5_1_15:90408823-90437190:-|nuORF;ENST00000560224.1_1_15:90408823-90446582:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.94366455078125	3	451.944376	1352.8113	-1.6861	-0.00076203	-0.83626	-0.00037794	-2.5224	-0.00114	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.73277	1	4542	4542		25.892	8.0586	1	792670			21499	13815	14466	14476	24820	24820					0.14900559725469975
KKQASRRKHKS	11	Unmodified	_KKQASRRKHKS_					0	0	0		ENST00000560184.5_1_15:90408823-90437190:-|nuORF;ENST00000560224.1_1_15:90408823-90446582:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9431457519531	3	451.944376	1352.8113	-0.67633	-0.00030566	-1.9317	-0.00087303	-2.6081	-0.0011787	451.94335598806316	53.501	2.9355	53.476	51.367	54.303	-0.024754					205	72	4	0	0	0	0.76384	2	4743	4660;4743		18.966	1.8295	1	765750			21500	13815	14466	14476	24821;24822	24822					0.14900559725469975
KKQASRRKHKS	11	Unmodified	_KKQASRRKHKS_					0	0	0		ENST00000560184.5_1_15:90408823-90437190:-|nuORF;ENST00000560224.1_1_15:90408823-90446582:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9427795410156	3	451.944376	1352.8113	0.028854	1.304E-05	-2.4427	-0.0011039	-2.4138	-0.0010909	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.76384	1	4942	4942		18.966	0.43528	1	513120			21501	13815	14466	14476	24823	24823					0.14900559725469975
KKQASRRKHKS	11	Unmodified	_KKQASRRKHKS_					0	0	0		ENST00000560184.5_1_15:90408823-90437190:-|nuORF;ENST00000560224.1_1_15:90408823-90446582:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9432067871094	3	451.944376	1352.8113	0.3266	0.00014761	-3.1108	-0.0014059	-2.7842	-0.0012583	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.75121	1	4342	4342		21.78	0.94327	1	721610			21502	13815	14466	14476	24824	24824					0.14900559725469975
KKQASRRKHKS	11	Unmodified	_KKQASRRKHKS_					0	0	0		ENST00000560184.5_1_15:90408823-90437190:-|nuORF;ENST00000560224.1_1_15:90408823-90446582:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9432678222656	3	451.944376	1352.8113	-0.53385	-0.00024127	-2.2464	-0.0010153	-2.7803	-0.0012565	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.78083	1	4366	4366		15.337	0	1	920720			21503	13815	14466	14476	24825	24825					0.14900559725469975
KKQESNHLQ	9	Unmodified	_KKQESNHLQ_					0	0	0		nc|ENSG00000258366|Q9NZ71-8|RTEL1;nc|ENSG00000258366|Q9NZ71-4|RTEL1;nc|ENSG00000258366|Q9NZ71|RTEL1;nc|ENSG00000258366|Q9NZ71-7|RTEL1;ENSG00000258366|ENST00000360203|RTEL1;nc|ENSG00000258366|Q9NZ71-2|RTEL1	nc|ENSG00000258366|Q9NZ71-8|RTEL1	nc|ENSG00000258366|Q9NZ71-8|RTEL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	556.3013916015625	2	556.296362	1110.57817	0.44132	0.0002455	2.8861	0.0016055	3.3274	0.001851	556.2977473266849	75.701	0.53406	75.747	75.488	76.022	0.046448					23	12	2	0	0	0	0.71772	1	7371	7371		39.253	5.0803	1	157390			21504	8910	14467	14477	24826	24826					0.027304582151373324
KKQGKKPSF	9	Unmodified	_KKQGKKPSF_					0	0	0			REV__nc|ENSG00000123200|Q5T200-2|ZC3H13	REV__nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.32080078125	2	524.319109	1046.62366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.654	1	53.736	53.236	54.236	0.081524								0	0	0	0.32469	1	4395	4395		21.96	1.4781	1		+		21505	18531	14468	14478	24827	24827					0.10221728468172842
KKQKKHPNLS	10	Unmodified	_KKQKKHPNLS_					0	0	0			REV__chr16:69749338-69752241|16|58.25|0.33|7.46|-|1|NOB1,NOB1|2	REV__chr16:69749338-69752241|16|58.25|0.33|7.46|-|1|NOB1,NOB1|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3667602539062	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.86763	1	12756	12756		26.693	8.4308	1	3346600	+		21506	15639	14469	14479	24828	24828					0.12459876308275852
KKQLADKLLRL	11	Unmodified	_KKQLADKLLRL_					0	0	0			REV__ENST00000507401.2_1_2:166929866-166930160:-|nuORF	REV__ENST00000507401.2_1_2:166929866-166930160:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.6227722167969	3	442.625761	1324.85546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.88	1	115.91	115.41	116.41	0.026466								0	0	0	0.56276	1	12722	12722		16.53	7.3181	1		+		21507	27905	14470	14480	24829	24829					0.20602151099069488
KKQLLQFN	8	Unmodified	_KKQLLQFN_					0	0	0			REV__chr1:155737326-155738157|14|28.14|0.31|6.52|+|0|None,DAP3|1	REV__chr1:155737326-155738157|14|28.14|0.31|6.52|+|0|None,DAP3|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8039245605469	2	509.805834	1017.59712	-0.053466	-2.7257E-05	-3.2869	-0.0016757	-3.3404	-0.001703	509.80400037204134	99.545	1.2612	99.586	99.14	100.4	0.041107					66	29	3	0	0	0	0.86288	1	10609	10609		26.796	1.3459	1	418130	+		21508	15417	14471	14481	24830	24830					0.08902039576844345
KKQMLRKTTK	10	Unmodified	_KKQMLRKTTK_					0	0	0		nc|ENSG00000113734|Q12981-2|BNIP1;nc|ENSG00000113734|Q12981-3|BNIP1	nc|ENSG00000113734|Q12981-2|BNIP1	nc|ENSG00000113734|Q12981-2|BNIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.5963134765625	3	421.263947	1260.77001	1.0829	0.0004562	-4.0938	-0.0017246	-3.0109	-0.0012684	421.26202015497194	23.397	0.38885	22.823	22.62	23.009	-0.57415					20	8	3	0	0	0	0.86207	1	1049	1049		24.232	0.71747	1	103620			21509	14853	14472	14482	24831	24831					0.15005662641760864
KKQNKNKTKNI	11	Unmodified	_KKQNKNKTKNI_					0	0	0		ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.6093444824219	3	448.60877	1342.80448	-1.3124	-0.00058875	2.6123	0.0011719	1.2999	0.00058316	448.6097327049683	74.956	1.1468	75.082	74.623	75.77	0.12545					89	30	4	0	0	0	0.72892	1	6990	6990		26.75	6.4347	1	427440			21510	9196	14473	14483	24832	24832					0.146792020542307
KKQQWEIMHKH	11	Unmodified	_KKQQWEIMHKH_					0	0	0		nc|ENSG00000130363|Q86UC2|RSPH3;nc|ENSG00000130363|Q86UC2-2|RSPH3;ENSG00000130363|ENST00000367069|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.59912109375	3	498.266239	1491.77689	0.40552	0.00020205	-2.5232	-0.0012572	-2.1177	-0.0010552	498.59931719521984	56.873	0.42866	56.978	56.807	57.236	0.10549					35	17	3	0	0	0	0.77803	1	4805	4805		15.921	1.227	1	241230			21511	14904	14474	14484	24833	24833					0.050669755223225366
KKQQWEIMHKH	11	Unmodified	_KKQQWEIMHKH_					0	0	0		nc|ENSG00000130363|Q86UC2|RSPH3;nc|ENSG00000130363|Q86UC2-2|RSPH3;ENSG00000130363|ENST00000367069|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	498.266239	1491.77689	-0.60494	-0.00030142	-1.439	-0.00071701	-2.044	-0.0010184	498.26558118405114	56.959	0.46714	57.031	56.851	57.319	0.071831	0.073929	0.00058855	NaN	15.921	32	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186690			21512	14904	14474	14484							0.050669755223225366
KKQQWEIMHKH	11	Unmodified	_KKQQWEIMHKH_					0	0	0		nc|ENSG00000130363|Q86UC2|RSPH3;nc|ENSG00000130363|Q86UC2-2|RSPH3;ENSG00000130363|ENST00000367069|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	498.266239	1491.77689	-0.5169	-0.00025755	-1.4561	-0.00072555	-1.973	-0.0009831	498.59974908634086	56.888	0.42564	56.862	56.712	57.137	-0.026108	-0.095077	0.00056295	NaN	15.921	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132140			21513	14904	14474	14484							0.050669755223225366
KKQRQAKKLAS	11	Unmodified	_KKQRQAKKLAS_					0	0	0			REV__ENSG00000139725|ENST00000267205|RHOF	REV__ENSG00000139725|ENST00000267205|RHOF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4099731445312	2	643.406778	1284.799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.89	1	108.89	108.39	109.39	0								0	0	0	0.56276	1	11328	11328		32.812	4.9302	1		+		21514	19566	14475	14485	24834	24834					0.16799523262420735
KKQRVIDELH	10	Unmodified	_KKQRVIDELH_					0	0	0			REV__nc|ENSG00000153827|Q14669-4|TRIP12	REV__nc|ENSG00000153827|Q14669-4|TRIP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5816955566406	3	422.582333	1264.72517	-1.8745	-0.00079214	1.022	0.00043188	-0.85252	-0.00036026	422.58264285495795	97.6	3.2584	97.802	96.488	99.746	0.20206					167	75	4	0	0	0	0.86452	1	10068	10068		28.081	3.8497	1	303430	+		21515	20360	14476	14486	24835	24835					0.1033955510006308
KKQTKILRN	9	Unmodified	_KKQTKILRN_					0	0	0		ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENST00000485672.2_1_19:42488766-42489464:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.81298828125	2	564.864215	1127.71388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.98	1	113.98	113.48	114.48	0								0	0	0	0.36148	1	11761	11761		11.511	0.64546	1				21516	12564	14477	14487	24836	24836					0.15512777796607224
KKQVDKPQ	8	Unmodified	_KKQVDKPQ_					0	0	0		L1MC4_dup20935|chr16:30827863-30828487:+|1.1514119371856053|0.354483127521221|1.7|63.0|8|2|sense	L1MC4_dup20935|chr16:30827863-30828487:+|1.1514119371856053|0.354483127521221|1.7|63.0|8|2|sense	L1MC4_dup20935|chr16:30827863-30828487:+|1.1514119371856053|0.354483127521221|1.7|63.0|8|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	485.78759765625	2	485.787641	969.56073	0.72392	0.00035167	-3.5527	-0.0017259	-2.8288	-0.0013742	485.7856481371192	15.835	0.30506	15.811	15.72	16.025	-0.024035					17	11	2	0	0	0	0.90465	1	80	80		40.573	1.7665	1	76997			21517	14596	14478	14488	24837	24837					0.07473162680139467
KKQVQELKSRL	11	Unmodified	_KKQVQELKSRL_					0	0	0		nc|ENSG00000100330|Q13615-3|MTMR3;nc|ENSG00000100330|Q13615-2|MTMR3;ENSG00000100330|ENST00000401950|MTMR3	nc|ENSG00000100330|Q13615-3|MTMR3	nc|ENSG00000100330|Q13615-3|MTMR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.9486999511719	3	452.948904	1355.82488	0.75692	0.00034285	-2.1261	-0.00096303	-1.3692	-0.00062018	452.94782570061545	106.9	1.1199	106.99	106.6	107.72	0.091255					115	26	5	0	0	0	0.75121	1	11504	11504		21.78	0.094677	1	5690500			21518	1825	14479	14489	24838	24838					0.1612037271402187
KKRAGTKK	8	Unmodified	_KKRAGTKK_					0	0	0			REV__ENST00000514826.5_1_4:142143525-142143672:+|nuORF	REV__ENST00000514826.5_1_4:142143525-142143672:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.78228759765625	2	458.806168	915.597784	0.041322	1.8959E-05	1.5099	0.00069275	1.5512	0.0007117	458.8070902790736	20.713	0.28405	20.789	20.699	20.983	0.075848					16	13	2	0	0	0	0.41217	1	527	527		96.19	16.739	1	36577	+		21519	17757	14480	14490	24839	24839					0.13660879016561012
KKRAPGRQVQR	11	Unmodified	_KKRAPGRQVQR_					0	0	0			REV__nc|ENSG00000125337|Q9UIL4-2|KIF25	REV__nc|ENSG00000125337|Q9UIL4-2|KIF25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.9398193359375	3	441.940855	1322.80073	0.44003	0.00019447	-2.9046	-0.0012837	-2.4646	-0.0010892	441.9393914889037	56.404	2.26	56.437	55.731	57.991	0.033184					145	81	3	0	0	0	0.77205	1	5039	5039		17.167	0	1	750870	+		21520	18635	14481	14491	24840	24840					0.15224577071035128
KKRCLVFT	8	Unmodified	_KKRCLVFT_					0	0	0		ENST00000337682.8_1_12:31451101-31479155:-|nuORF	ENST00000337682.8_1_12:31451101-31479155:-|nuORF	ENST00000337682.8_1_12:31451101-31479155:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.79522705078125	2	497.796955	993.579357	0.10323	5.1388E-05	-2.4116	-0.0012005	-2.3084	-0.0011491	497.7955420598114	48.958	1.1928	48.952	48.605	49.798	-0.0056381					56	26	3	0	0	0	0.86288	1	4069	4069		26.796	1.3459	1	455850			21521	10192	14482	14492	24841	24841					0.08231001050330633
KKRFRYIILKQ	11	Unmodified	_KKRFRYIILKQ_					0	0	0		ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47	ENSG00000085433|ENST00000369962|WDR47	ENSG00000085433|ENST00000369962|WDR47	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.8435363769531	3	498.320672	1491.94019	-1.4749	-0.00073497	3.6061	0.001797	2.1312	0.001062	498.3224618252345	47.708	1.1466	48.178	47.561	48.708	0.46941					42	28	2	0	0	0	0.18304	1	4580	4580		10.104	4.1029	1	335200			21522	1530	14483	14493	24842	24842					0.21389521635683195
KKRGLGHS	8	Unmodified	_KKRGLGHS_					0	0	0			REV__ENST00000393360.7_1_5:179663386-179666931:-|nuORF	REV__ENST00000393360.7_1_5:179663386-179666931:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7684020996094	2	441.767043	881.519533	-1.395	-0.00061625	3.8166	0.001686	2.4216	0.0010698	441.7686373014596	107.04	1.3051	107.18	106.55	107.86	0.13866					69	31	3	0	0	0	0.86791	1	11470	11470		28.254	2.8041	1	2385100	+		21523	26056	14484	14494	24843	24843					0.07403446431328575
KKRGLGHS	8	Unmodified	_KKRGLGHS_					0	0	0			REV__ENST00000393360.7_1_5:179663386-179666931:-|nuORF	REV__ENST00000393360.7_1_5:179663386-179666931:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7681579589844	2	441.767043	881.519533	1.5192	0.00067115	0.75149	0.00033198	2.2707	0.0010031	441.7673408334102	107.1	1.0458	107.2	106.82	107.87	0.10395					97	38	4	0	0	0	0.86288	1	13072	13072		26.796	1.3459	1	2679600	+		21524	26056	14484	14494	24844	24844					0.07403446431328575
KKRGRQAG	8	Unmodified	_KKRGRQAG_					0	0	0			REV__ENSG00000187664|ENST00000291481|HAPLN4	REV__ENSG00000187664|ENST00000291481|HAPLN4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7546691894531	2	450.777942	899.541332	-0.14126	-6.3675E-05	-1.8786	-0.00084683	-2.0199	-0.00091051	450.7767310093988	83.02	0.17191	83.086	82.996	83.168	0.065918					5	3	2	0	0	0	0.4196	1	8223	8223		13.775	6.582	1	15713	+		21525	22931	14485	14495	24845	24845					0.08754251179891526
KKRGSPNSA	9	Unmodified	_KKRGSPNSA_					0	0	0			REV__nc|ENSG00000175662|Q6ZVM7-3|TOM1L2	REV__nc|ENSG00000175662|Q6ZVM7-3|TOM1L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7673034667969	2	472.76724	943.519927	-0.41041	-0.00019403	0.54101	0.00025577	0.1306	6.1745E-05	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.77696	1	8565	8565		31.53	1.0262	1	590200	+		21526	22079	14486	14496	24846	24846					0.045908213605116543
KKRITSLS	8	Unmodified	_KKRITSLS_					0	0	0		ENSG00000145863|ENST00000274545|GABRA6	ENSG00000145863|ENST00000274545|GABRA6	ENSG00000145863|ENST00000274545|GABRA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.79766845703125	2	466.798009	931.581465	0.66234	0.00030918	-1.3183	-0.00061538	-0.65596	-0.0003062	466.797213976412	18.751	0.8023	18.727	18.525	19.327	-0.024033					69	37	3	0	0	0	0.84191	1	364	364		11.511	0.64546	1	892260			21527	4799	14487	14497	24847	24847					0.11293753059806022
KKRKAGASA	9	Unmodified	_KKRKAGASA_					0	0	0		ENSG00000146205|ENST00000674324|ANO7;nc|ENSG00000146205|Q6IWH7|ANO7;nc|ENSG00000146205|Q6IWH7-3|ANO7	ENSG00000146205|ENST00000674324|ANO7	ENSG00000146205|ENST00000674324|ANO7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	458.7877502441406	2	458.787976	915.561398	0.80291	0.00036836	-2.0972	-0.00096216	-1.2943	-0.00059379	458.7870101504016	92.972	4.4564	93.018	92.411	96.867	0.045448					249	105	5	0	0	0	0.78058	1	9853	9853		30.504	3.7075	1	17992000			21528	4825	14488	14498	24848	24848					0.10024002119848774
KKRKKKKVK	9	Unmodified	_KKRKKKKVK_					0	0	0			REV__nc|ENSG00000187624|Q6ZQX7-2|LIAT1	REV__nc|ENSG00000187624|Q6ZQX7-2|LIAT1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.929443359375	2	585.929692	1169.84483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.729	1	94.17	93.67	94.67	0.44099								0	0	0	0.35896	1	11175	11175		12.207	0.69583	1		+		21529	22928	14489	14499	24849	24849					0.26670213235297524
KKRKKKKVK	9	Unmodified	_KKRKKKKVK_					0	0	0			REV__nc|ENSG00000187624|Q6ZQX7-2|LIAT1	REV__nc|ENSG00000187624|Q6ZQX7-2|LIAT1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.927734375	2	585.929692	1169.84483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.797	1	94.238	93.738	94.738	0.44099								0	0	0	0.36143	1	11185	11185		3.9852	0	1		+		21530	22928	14489	14499	24850	24850					0.26670213235297524
KKRKRKLRRHS	11	Unmodified	_KKRKRKLRRHS_					0	0	0			REV__ENSG00000130749|ENST00000253048|ZC3H4	REV__ENSG00000130749|ENST00000253048|ZC3H4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.2807922363281	3	498.330565	1491.96987	0.32544	0.00016218	-3.234	-0.0016116	-2.9086	-0.0014494	498.66263422774887	33.292	0.090992	33.259	33.216	33.307	-0.032677					5	3	2	0	0	0	0.18066	1	1599	1599		9.6461	3.9474	1	56576	+		21531	18901	14490	14500	24851	24851					0.24355898424369116
KKRKTQCKRKL	11	Unmodified	_KKRKTQCKRKL_					0	0	0			REV__ENST00000395425.6_1_14:55647481-55649137:-|nuORF	REV__ENST00000395425.6_1_14:55647481-55649137:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	473.30548095703125	3	472.969645	1415.88711	-0.99152	-0.00046896	3.8757	0.0018331	2.8842	0.0013641	472.9714128496593	48.869	1.9906	48.895	48.114	50.105	0.025574					169	50	5	0	0	0	0.80813	1	3789	3789		9.6461	0.43434	1	1653800	+		21532	26109	14491	14501	24852	24852					0.19579820581361673
KKRLEDLGVPV	11	Unmodified	_KKRLEDLGVPV_					0	0	0		ENSG00000188984|ENST00000359318|AADACL3	ENSG00000188984|ENST00000359318|AADACL3	ENSG00000188984|ENST00000359318|AADACL3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.8899536132812	2	627.382437	1252.75032	1.3875	0.00087048	-1.3709	-0.00086006	0.016609	1.042E-05	627.381312199831	110.83	0.71429	110.95	110.77	111.48	0.11659					73	29	3	0	0	0	0.17643	1	11913	11913		9.1829	0	1	205530			21533	7976	14492	14502	24853	24853					0.1340560990265658
KKRLIFFV	8	Unmodified	_KKRLIFFV_					0	0	0			REV__ENSG00000118402|ENST00000369816|ELOVL4	REV__ENSG00000118402|ENST00000369816|ELOVL4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7820434570312	2	525.844762	1049.67497	-0.88873	-0.00046733	3.9495	0.0020768	3.0608	0.0016095	525.8460845400814	47.208	0.19947	48.131	47.999	48.199	0.92315					11	4	4	0	0	0	0.4196	1	4489	4489		15.636	7.4049	1	624770	+		21534	18306	14493	14503	24854	24854					0.1521209723289303
KKRLILLIQK	10	Unmodified	_KKRLILLIQK_					0	0	0			REV__ENST00000354566.7_1_11:85436805-85436946:-|nuORF	REV__ENST00000354566.7_1_11:85436805-85436946:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.297607421875	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.364	1	69.499	68.999	69.999	0.13522								0	0	0	0.45132	1	6269	6269		7.0187	1.0176	1		+		21535	25358	14494	14504	24855	24855					0.2595994682969831
KKRLILLIQK	10	Unmodified	_KKRLILLIQK_					0	0	0			REV__ENST00000354566.7_1_11:85436805-85436946:-|nuORF	REV__ENST00000354566.7_1_11:85436805-85436946:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.29742431640625	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.389	1	75.784	75.284	76.284	0.39507								0	0	0	0.45132	1	8525	8525		4.0829	0.87158	1		+		21536	25358	14494	14504	24856	24856					0.2595994682969831
KKRLILLIQK	10	Unmodified	_KKRLILLIQK_					0	0	0			REV__ENST00000354566.7_1_11:85436805-85436946:-|nuORF	REV__ENST00000354566.7_1_11:85436805-85436946:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2970886230469	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.921	1	76.489	75.989	76.989	0.56836								0	0	0	0.45132	1	8634	8634		7.3997	3.3168	1		+		21537	25358	14494	14504	24857	24857					0.2595994682969831
KKRLYQRN	8	Unmodified	_KKRLYQRN_					0	0	0			REV__nc|ENSG00000108439|Q9NVS9-4|PNPO	REV__nc|ENSG00000108439|Q9NVS9-4|PNPO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3314208984375	2	553.333082	1104.65161	-1.4413	-0.00079751	0.24372	0.00013486	-1.1976	-0.00066265	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.80706	1	10020	10020		19.36	2.8868	1	2490200	+		21538	29770	14495	14505	24858	24858					0.10347051448297861
KKRLYYREKK	10	Unmodified	_KKRLYYREKK_					0	0	0		ENST00000499638.6_1_12:121661214-121671021:+|nuORF;ENST00000543318.5_1_12:121659934-121671349:+|nuORF;nc|ENSG00000135124|Q99571-3|P2RX4;ENSG00000135124|ENST00000337233|P2RX4;nc|ENSG00000135124|Q99571-2|P2RX4	ENST00000499638.6_1_12:121661214-121671021:+|nuORF	ENST00000499638.6_1_12:121661214-121671021:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.287109375	3	471.289261	1410.84595	0.65402	0.00030823	-3.8628	-0.0018205	-3.2088	-0.0015123	471.28739779746195	22.716	0.83821	22.297	21.97	22.808	-0.41879					46	19	4	0	0	0	0.86106	1	942	942		33.922	4.3709	1	141220			21539	3987	14496	14506	24859	24859					0.15696382813507626
KKRNDNLLKA	10	Unmodified	_KKRNDNLLKA_					0	0	0		ENSG00000196604|ENST00000409914|POTEF	ENSG00000196604|ENST00000409914|POTEF	ENSG00000196604|ENST00000409914|POTEF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5802307128906	3	400.578811	1198.7146	3.1805	0.001274	0.74448	0.00029822	3.925	0.0015723	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.86698	1	12452	12452		28.081	0.43757	1	4827300			21540	8080	14497	14507	24860	24860					0.12319572445653648
KKRPGIVRKGP	11	Unmodified	_KKRPGIVRKGP_					0	0	0			REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7669677734375	3	412.606813	1234.79861	-1.8848	-0.00077767	4.0725	0.0016804	2.1878	0.00090269	412.6084289063361	49.375	1.2698	49.401	49.011	50.281	0.025578					43	32	2	0	0	0	0.17863	1	3763	3763		14.086	11.234	1	95066	+		21541	20560	14498	14508	24861	24861					0.19060148333210236
KKRPGIVRKGP	11	Unmodified	_KKRPGIVRKGP_					0	0	0			REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	412.606813	1234.79861	-0.025732	-1.0617E-05	1.6635	0.00068638	1.6378	0.00067576	412.6074552845534	49.397	1.0778	49.394	48.871	49.949	-0.0030327	-0.0035949	-0.0014246	NaN	14.086	35	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75501	+		21542	20560	14498	14508							0.19060148333210236
KKRQARTLY	9	Unmodified	_KKRQARTLY_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|86|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|86|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|86|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3536987304688	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.7932	1	12347	12347		25.574	3.8883	1	3937500			21543	14702	14499	14509	24862	24862					0.11863607136797327
KKRRGRPPA	9	Unmodified	_KKRRGRPPA_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.3402709960938	2	533.341241	1064.66793	1.7726	0.00094538	-3.1758	-0.0016938	-1.4032	-0.0007484	533.3394684575402	98.908	1.4701	99.269	98.774	100.24	0.36137					81	36	3	0	0	0	0.7932	1	11939	11939		18.324	3.6603	1	1093200			21544	1442	14500	14510	24863	24863					0.1381817740502811
KKRRREQVLLT	11	Unmodified	_KKRRREQVLLT_					0	0	0			REV__nc|ENSG00000128604|Q13568-6|IRF5	REV__nc|ENSG00000128604|Q13568-6|IRF5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.2298889160156	3	476.303681	1425.88921	-0.98841	-0.00047078	2.0422	0.00097272	1.0538	0.00050193	476.3048084333002	25.101	0.10472	25.164	25.107	25.211	0.063122					7	4	2	0	0	0	0.18216	1	904	904		9.6461	0.43434	1	31888	+		21545	27598	14501	14511	24864	24864					0.19330572590843076
KKRRRKKT	8	Unmodified	_KKRRRKKT_					0	0	0		ENST00000428417.5_1_1:15546837-15546969:+|nuORF	ENST00000428417.5_1_1:15546837-15546969:+|nuORF	ENST00000428417.5_1_1:15546837-15546969:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.8801879882812	2	550.877991	1099.74143	3.4101	0.0018786	-1.1735	-0.00064648	2.2366	0.0012321	550.8772112738451	108.99	0.56081	108.96	108.67	109.23	-0.029381					52	22	3	0	0	0	0.83058	1	12071	12071		12.959	0	1	2297500			21546	11594	14502	14512	24865	24865					0.19554725847501686
KKRRTASPPAL	11	Unmodified	_KKRRTASPPAL_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	613.3839721679688	2	612.880396	1223.74624	-0.12345	-7.5661E-05	-0.76805	-0.00047072	-0.8915	-0.00054638	612.8794735432923	104.89	2.8735	104.89	104.24	107.11	0					239	67	7	0	0	0	0.51007	2	10892	10772;10892		51.193	6.4175	1	38592000			21547	2943	14503	14513	24866;24867	24867					0.14331565199631768
KKRRTASPPAL	11	Unmodified	_KKRRTASPPAL_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	613.383544921875	2	612.880396	1223.74624	3.0905	0.0018941	-4.4816	-0.0027467	-1.3912	-0.00085262	612.8774407741583	104.71	3.9916	104.67	103.85	107.84	-0.04039					302	94	6	0	0	0	0.65746	1	11468	11468		37.812	10.764	1	48609000			21548	2943	14503	14513	24868	24868					0.14331565199631768
KKRRTASPPAL	11	Unmodified	_KKRRTASPPAL_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	613.384521484375	2	612.880396	1223.74624	1.1743	0.00071971	-2.5584	-0.001568	-1.3841	-0.00084828	612.878611922605	104.31	3.5817	104.48	103.81	107.39	0.17096					311	89	7	0	0	0	0.55601	1	11233	11233		47.96	7.1814	1	83708000			21549	2943	14503	14513	24869	24869					0.14331565199631768
KKRRTKVRFIF	11	Unmodified	_KKRRTKVRFIF_					0	0	0			REV__nc|ENSG00000105492|O43699-6|SIGLEC6	REV__nc|ENSG00000105492|O43699-6|SIGLEC6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.9830017089844	3	493.652533	1477.93577	-1.6053	-0.00079248	-4.4432	-0.0021934	-6.0485	-0.0029859	493.6501931782481	44.56	1.836	44.56	43.623	45.459	0					138	44	4	0	0	0	0.81219	1	3195	3195		8.7993	5.3906	1	434870	+		21550	17544	14504	14514	24870	24870					0.21592057212774307
KKRSSPNQ	8	Unmodified	_KKRSSPNQ_					0	0	0			REV__nc|ENSG00000183230|Q9UI47-2|CTNNA3	REV__nc|ENSG00000183230|Q9UI47-2|CTNNA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7670593261719	2	472.76724	943.519927	-0.10807	-5.1094E-05	0.17013	8.0433E-05	0.062057	2.9339E-05	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.90983	1	8449	8449		42.396	5.237	1	501240	+		21551	22586	14505	14515	24871	24871					0.04590821360523023
KKRTILWRP	9	Unmodified	_KKRTILWRP_					0	0	0			REV__ENSG00000146477|ENST00000275300|SLC22A3	REV__ENSG00000146477|ENST00000275300|SLC22A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.3770751953125	2	599.382574	1196.7506	-0.35766	-0.00021438	-3.7869	-0.0022698	-4.1446	-0.0024842	599.3801693786043	103.37	3.7428	103.41	103.03	106.77	0.041481					250	89	5	0	0	0	0.74721	1	11342	11342		37.159	0.71236	1	13277000	+		21552	20021	14506	14516	24872	24872					0.16009074413159396
KKSASRHS	8	Unmodified	_KKSASRHS_					0	0	0			REV__ENSG00000156869|ENST00000646001|FRRS1	REV__ENSG00000156869|ENST00000646001|FRRS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.7549743652344	2	450.754133	899.493713	-1.2719	-0.00057332	1.3247	0.00059711	0.052796	2.3798E-05	450.7546758979468	81.682	3.9504	81.682	80.4	84.351	0					234	110	3	0	0	0	0.87064	1	7493	7493		29.15	0	1	177450	+		21553	20511	14507	14517	24873	24873					0.03994552189044498
KKSASSKRL	9	Unmodified	_KKSASSKRL_					0	0	0			REV__ENSG00000120029|ENST00000370033|ARMH3	REV__ENSG00000120029|ENST00000370033|ARMH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.8138122558594	2	502.81419	1003.61383	-0.061598	-3.0972E-05	-0.99447	-0.00050004	-1.0561	-0.00053101	502.81375645147	97.475	3.9537	97.532	96.775	100.73	0.056839					266	91	5	0	0	0	0.77696	3	10251	10251;10263;10299		31.53	8.4873	1	22149000	+		21554	18395	14508	14518	24874;24875;24876	24874					0.11216540462805824
KKSDIATIKIH	11	Unmodified	_KKSDIATIKIH_					0	0	0		nc|ENSG00000170801|P83110-2|HTRA3;ENSG00000170801|ENST00000307358|HTRA3	nc|ENSG00000170801|P83110-2|HTRA3	nc|ENSG00000170801|P83110-2|HTRA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3842163085938	2	627.382437	1252.75032	-1.2002	-0.000753	1.3364	0.00083845	0.1362	8.5448E-05	627.3830182520044	111.13	0.69723	111.12	110.53	111.23	-0.0074387					64	27	3	0	0	0	0.7144	1	11858	11858		29.17	1.2878	1	327620			21555	6614	14509	14519	24877	24877					0.1340560990265658
KKSEALKVAAN	11	Unmodified	_KKSEALKVAAN_					0	0	0			REV__ENST00000547654.5_1_12:46313059-46316853:-|nuORF	REV__ENST00000547654.5_1_12:46313059-46316853:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	579.8436889648438	2	579.845687	1157.67682	0.88069	0.00051066	-3.7088	-0.0021505	-2.8281	-0.0016399	579.843435527032	102.18	1.0887	102.31	101.93	103.02	0.13523					81	26	4	0	0	0	0.73893	1	10723	10723		24.519	0	1	2076300	+		21556	28556	14510	14520	24878	24878					0.10429061460172306
KKSEALKVAAN	11	Unmodified	_KKSEALKVAAN_					0	0	0			REV__ENST00000547654.5_1_12:46313059-46316853:-|nuORF	REV__ENST00000547654.5_1_12:46313059-46316853:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	579.843505859375	2	579.845687	1157.67682	-1.355	-0.00078567	-1.4577	-0.00084523	-2.8126	-0.0016309	579.8447437223629	102.17	1.0869	102.31	101.93	103.02	0.13569					79	26	4	0	0	0	0.7144	1	10671	10671		29.17	2.4771	1	2038000	+		21557	28556	14510	14520	24879	24879					0.10429061460172306
KKSEGLIT	8	Unmodified	_KKSEGLIT_					0	0	0		ENSG00000127947|ENST00000248594|PTPN12;nc|ENSG00000127947|Q05209-2|PTPN12;nc|ENSG00000127947|Q05209-3|PTPN12	ENSG00000127947|ENST00000248594|PTPN12	ENSG00000127947|ENST00000248594|PTPN12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26312255859375	2	438.263468	874.512382	-1.2142	-0.00053214	0.66524	0.00029155	-0.54896	-0.00024059	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.87922	1	3346	3346		31.955	0	1	4828000			21558	3519	14511	14521	24880	24880					0.07010669040232642
KKSGARTK	8	Unmodified	_KKSGARTK_					0	0	0			REV__chr14:58639262-58640736|38|14.92|0.81|4.21|+|ENST00000541264|DACT1,DACT1	REV__chr14:58639262-58640736|38|14.92|0.81|4.21|+|ENST00000541264|DACT1,DACT1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2624206542969	2	438.274701	874.534849	-0.11678	-5.118E-05	2.8307	0.0012406	2.7139	0.0011894	438.27679318472104	40.355	0.26694	40.307	40.116	40.383	-0.04789					11	9	2	0	0	0	0.4196	1	2556	2556		14.865	0	1	142600	+		21559	15601	14512	14522	24881	24881					0.09256313228513591
KKSGLIPM	8	Unmodified	_KKSGLIPM_					0	0	0			REV__chr9:36190911-36204068|18|27.61|0.09|8.2|+|0|None,CLTA|1	REV__chr9:36190911-36204068|18|27.61|0.09|8.2|+|0|None,CLTA|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2630920410156	2	437.264956	872.515359	-0.77238	-0.00033773	2.8096	0.0012285	2.0372	0.0008908	437.26614393764254	27.409	1.8866	27.234	26.703	28.59	-0.17559					105	43	3	0	0	0	0.87479	1	1726	1726		30.504	1.3541	1	457600	+		21560	15936	14513	14523	24882	24882					0.07400220893396181
KKSHLRMVE	9	Unmodified	_KKSHLRMVE_					0	0	0		nc|ENSG00000136297|Q8IY49-3|MMD2;ENSG00000136297|ENST00000401401|MMD2;nc|ENSG00000136297|Q8IY49|MMD2	nc|ENSG00000136297|Q8IY49-3|MMD2	nc|ENSG00000136297|Q8IY49-3|MMD2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.3214721679688	2	564.321325	1126.6281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.421	1	55.384	54.884	55.884	-0.036827								0	0	0	0.29134	1	4643	4643		34.173	1.3601	1				21561	4105	14514	14524	24883	24883					0.0698486961944127
KKSIHKFIKSK	11	Unmodified	_KKSIHKFIKSK_					0	0	0			REV__ENSG00000088205|ENST00000263239|DDX18	REV__ENSG00000088205|ENST00000263239|DDX18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.62298583984375	3	448.62224	1342.84489	0.42332	0.00018991	0.27214	0.00012209	0.69546	0.000312	448.6223833364076	64.386	0.58044	64.51	64.259	64.839	0.12396					30	20	2	0	0	0	0.76087	1	5665	5665		19.627	0.36425	1	196720	+		21562	16939	14515	14525	24884	24884					0.1871816844463865
KKSKKKSSR	9	Unmodified	_KKSKKKSSR_					0	0	0		ENSG00000137161|ENST00000372836|CNPY3	ENSG00000137161|ENST00000372836|CNPY3	ENSG00000137161|ENST00000372836|CNPY3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.8624267578125	2	538.848564	1075.68258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.4	1	117.4	116.9	117.9	0								0	0	0	0.36238	1	11993	11993		10.265	0	1				21563	4175	14516	14526	24885	24885					0.14776204762506495
KKSKKKTSN	9	Unmodified	_KKSKKKTSN_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8274536132812	2	524.827298	1047.64004	1.2413	0.00065145	-2.1188	-0.001112	-0.87755	-0.00046056	524.8261082044575	99.092	3.5228	99.14	98.41	101.93	0.047852					344	82	7	0	0	0	0.77696	2	10738	10738;10934		31.53	4.7337	1	29910000	+		21564	18645	14517	14527	24886;24887	24886					0.11812809634284349
KKSKKKTSN	9	Unmodified	_KKSKKKTSN_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8271484375	2	524.827298	1047.64004	1.241	0.00065132	-1.2509	-0.00065651	-0.0098941	-5.1927E-06	524.8265446316465	102.17	1.0632	102.22	101.85	102.91	0.04319					53	25	3	0	0	0	0.7932	1	11045	11045		21.96	0.25755	1	396530	+		21565	18645	14517	14527	24888	24888					0.11812809634284349
KKSKKKTSN	9	Unmodified	_KKSKKKTSN_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8275756835938	2	524.827298	1047.64004	-0.1321	-6.933E-05	-0.82488	-0.00043292	-0.95698	-0.00050225	524.8267772586088	99.003	3.4379	99.226	98.52	101.96	0.22263					298	81	5	0	0	0	0.7932	1	10444	10444		26.693	4.9906	1	31133000	+		21566	18645	14517	14527	24889	24889					0.11812809634284349
KKSKKKTSN	9	Unmodified	_KKSKKKTSN_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8273315429688	2	524.827298	1047.64004	-0.12962	-6.8027E-05	0.31317	0.00016436	0.18355	9.6331E-05	524.8273126123019	102.03	1.1787	102.23	101.8	102.98	0.19483					72	28	3	0	0	0	0.7932	2	10676	10676;10689		21.96	1.9631	1	693200	+		21567	18645	14517	14527	24890;24891	24890					0.11812809634284349
KKSKKKTSN	9	Unmodified	_KKSKKKTSN_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8272705078125	2	524.827298	1047.64004	0.82695	0.00043401	-0.76745	-0.00040278	0.059499	3.1227E-05	524.826769505368	102.16	1.0919	102.29	101.89	102.98	0.13523					72	26	3	0	0	0	0.7932	1	10783	10783		21.96	0.25755	1	650470	+		21568	18645	14517	14527	24892	24892					0.11812809634284349
KKSKKKTSN	9	Unmodified	_KKSKKKTSN_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8275756835938	2	524.827298	1047.64004	-1.5341	-0.00080515	0.75802	0.00039783	-0.77611	-0.00040732	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.77696	1	10423	10423		31.53	5.9558	1	23918000	+		21569	18645	14517	14527	24893	24893					0.11812809634284349
KKSKKKTSN	9	Unmodified	_KKSKKKTSN_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.827880859375	2	524.827298	1047.64004	-1.5341	-0.00080515	1.6919	0.00088794	0.15773	8.2783E-05	524.8280472672277	102.21	1.1307	102.34	101.89	103.02	0.13569					72	27	3	0	0	0	0.7932	1	10685	10685		26.693	0	1	626370	+		21570	18645	14517	14527	24894	24894					0.11812809634284349
KKSKKQQDS	9	Unmodified	_KKSKKQQDS_					0	0	0		ENSG00000134910|ENST00000392708|STT3A;nc|ENSG00000134910|P46977-2|STT3A	ENSG00000134910|ENST00000392708|STT3A	ENSG00000134910|ENST00000392708|STT3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.806640625	2	538.806562	1075.59857	0.74987	0.00040403	-0.4983	-0.00026849	0.25156	0.00013554	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.48102	1	9010	9010		52.937	8.8199	1	840570			21571	3972	14518	14528	24895	24895					0.0637962887494723
KKSKSDAKAV	10	Unmodified	_KKSKSDAKAV_					0	0	0		ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3185424804688	2	531.319306	1060.62406	0.23787	0.00012639	-1.2005	-0.00063785	-0.96264	-0.00051147	531.3183123814076	94.878	1.4608	95.298	94.89	96.35	0.41963					101	35	4	0	0	0	0.8651	1	11392	11392		25.574	2.5316	1	2093500			21572	4918	14519	14529	24896	24896					0.0961710339736328
KKSLFVLRGLL	11	Unmodified	_KKSLFVLRGLL_					0	0	0		ENST00000441394.1_1_13:30880936-30881176:-|nuORF	ENST00000441394.1_1_13:30880936-30881176:-|nuORF	ENST00000441394.1_1_13:30880936-30881176:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	638.3358154296875	2	637.421365	1272.82818	-0.16599	-0.00010581	2.8603	0.0018232	2.6943	0.0017174	637.4236724516602	40.361	0.3318	40.951	40.681	41.013	0.58915					11	8	2	0	0	0	0.18021	1	3413	3413		12.812	7.5916	1	195790			21573	11785	14520	14530	24897	24897					0.20267667558709945
KKSNGRPN	8	Unmodified	_KKSNGRPN_					0	0	0		ENST00000586588.5_1_19:10244345-10254710:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1	ENST00000586588.5_1_19:10244345-10254710:-|nuORF	ENST00000586588.5_1_19:10244345-10254710:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.75543212890625	2	450.754133	899.493713	-0.14135	-6.3713E-05	0.3109	0.00014014	0.16956	7.6428E-05	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.87922	1	7991	7991		31.955	1.4512	1	337080			21574	3689	14521	14531	24898	24898					0.03994552189044498
KKSNGRPN	8	Unmodified	_KKSNGRPN_					0	0	0		ENST00000586588.5_1_19:10244345-10254710:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1	ENST00000586588.5_1_19:10244345-10254710:-|nuORF	ENST00000586588.5_1_19:10244345-10254710:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7544250488281	2	450.754133	899.493713	0.36741	0.00016561	0.13246	5.9707E-05	0.49987	0.00022532	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.90983	1	7872	7872		42.396	10.441	1	394230			21575	3689	14521	14531	24899	24899					0.03994552189044498
KKSPFLPG	8	Unmodified	_KKSPFLPG_					0	0	0		nc|ENSG00000130856|Q9UL36-2|ZNF236;nc|ENSG00000130856|Q9UL36|ZNF236;ENSG00000130856|ENST00000320610|ZNF236	nc|ENSG00000130856|Q9UL36-2|ZNF236	nc|ENSG00000130856|Q9UL36-2|ZNF236	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26519775390625	2	437.263271	872.511988	1.7622	0.00077054	3.9045	0.0017073	5.6667	0.0024778	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.86791	1	876	876		28.254	0	1	1079000			21576	3694	14522	14532	24900	24900					0.0706329411104889
KKSPFLPG	8	Unmodified	_KKSPFLPG_					0	0	0		nc|ENSG00000130856|Q9UL36-2|ZNF236;nc|ENSG00000130856|Q9UL36|ZNF236;ENSG00000130856|ENST00000320610|ZNF236	nc|ENSG00000130856|Q9UL36-2|ZNF236	nc|ENSG00000130856|Q9UL36-2|ZNF236	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26556396484375	2	437.263271	872.511988	1.7524	0.00076626	3.4445	0.0015062	5.1969	0.0022724	437.264848658338	24.04	1.4327	23.526	22.938	24.371	-0.51365					98	32	5	0	0	0	0.89962	4	1113	1113;1124;1135;1147		42.474	1.9018	1	13559000			21577	3694	14522	14532	24901;24902;24903;24904	24901					0.0706329411104889
KKSPFLPG	8	Unmodified	_KKSPFLPG_					0	0	0		nc|ENSG00000130856|Q9UL36-2|ZNF236;nc|ENSG00000130856|Q9UL36|ZNF236;ENSG00000130856|ENST00000320610|ZNF236	nc|ENSG00000130856|Q9UL36-2|ZNF236	nc|ENSG00000130856|Q9UL36-2|ZNF236	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2657470703125	2	437.263271	872.511988	2.8534	0.0012477	2.2102	0.00096646	5.0637	0.0022142	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.87479	6	1418	1344;1356;1368;1406;1418;1456		47.916	10.022	1	21873000			21578	3694	14522	14532	24905;24906;24907;24908;24909;24910	24909					0.0706329411104889
KKSPKKHRQ	9	Unmodified	_KKSPKKHRQ_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|75|3|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|75|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.854736328125	2	568.854181	1135.69381	-0.36185	-0.00020584	-1.2386	-0.0007046	-1.6005	-0.00091044	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.78983	1	10648	10648		27.882	0	1	34546000	+		21579	29616	14523	14533	24911	24911					0.1313902685665198
KKSPLALLAQT	11	Unmodified	_KKSPLALLAQT_					0	0	0		ENSG00000183779|ENST00000331569|ZNF703;nc|ENSG00000165655|Q96F45-3|ZNF503;nc|ENSG00000165655|Q96F45-2|ZNF503;ENSG00000165655|ENST00000372524|ZNF503	ENSG00000183779|ENST00000331569|ZNF703	ENSG00000183779|ENST00000331569|ZNF703	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	585.3638305664062	2	585.366256	1168.71796	-0.77125	-0.00045146	-2.0638	-0.0012081	-2.835	-0.0016595	585.3651006310033	97.781	1.0682	97.838	97.422	98.49	0.056831					64	24	3	0	0	0	0.73621	1	10339	10339		25.126	2.5463	1	408070			21580	7561	14524	14534	24912	24912					0.14034822499638722
KKSPLSPLYT	10	Unmodified	_KKSPLSPLYT_					0	0	0		ENST00000551218.1_1_12:94914868-94915450:-|nuORF	ENST00000551218.1_1_12:94914868-94915450:-|nuORF	ENST00000551218.1_1_12:94914868-94915450:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3306884765625	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.85438	1	9186	9186		16.473	1.6083	1	18558000			21581	13668	14525	14535	24913	24913					0.0881915819995811
KKSQSLISFI	10	Unmodified	_KKSQSLISFI_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8435668945312	2	575.845156	1149.67576	-0.99759	-0.00057446	-2.003	-0.0011534	-3.0006	-0.0017279	575.8438793716047	103.86	0.79524	103.86	103.63	104.42	-0.0035706					50	18	4	0	0	0	0.86763	1	11215	11215		26.693	1.1189	1	515270	+		21582	21140	14526	14536	24914	24914					0.10690847091291289
KKSRKKKYKK	10	Unmodified	_KKSRKKKYKK_					0	0	0			REV__ENSG00000101882|ENST00000371410|NKAP	REV__ENSG00000101882|ENST00000371410|NKAP	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.244873046875	3	441.297868	1320.87177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.349	1	15.266	14.766	15.766	-0.083363								0	0	0	0.45132	1	31	31		11.636	1.9898	1		+		21583	17308	14527	14537	24915	24915					0.22417277055819795
KKSRLIYHQRV	11	Unmodified	_KKSRLIYHQRV_					0	0	0		nc|ENSG00000176024|Q6PF04-2|ZNF613;ENSG00000176024|ENST00000293471|ZNF613	nc|ENSG00000176024|Q6PF04-2|ZNF613	nc|ENSG00000176024|Q6PF04-2|ZNF613	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6246643066406	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.79224	1	12336	12336		12.957	3.3113	1	2577100			21584	7051	14528	14538	24916	24916					0.15574901045056322
KKSSHSVKK	9	Unmodified	_KKSSHSVKK_					0	0	0			REV__nc|ENSG00000116731|Q13029-5|PRDM2	REV__nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.81396484375	2	514.81419	1027.61383	0.52238	0.00026893	-0.90142	-0.00046406	-0.37904	-0.00019514	514.8137347167254	16.636	0.88589	16.026	15.82	16.706	-0.6107					51	19	5	0	0	0	0.12688	1	147	147		87.696	7.9839	1	3645200	+		21585	18220	14529	14539	24917	24917					0.10112540462819197
KKSSMVALKR	10	Unmodified	_KKSSMVALKR_					0	0	0		nc|ENSG00000115355|Q3V6T2-5|CCDC88A;nc|ENSG00000115355|Q3V6T2-3|CCDC88A;ENSG00000115355|ENST00000436346|CCDC88A	nc|ENSG00000115355|Q3V6T2-5|CCDC88A	nc|ENSG00000115355|Q3V6T2-5|CCDC88A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.35693359375	2	574.352625	1146.6907	2.697	0.001549	3.0196	0.0017343	5.7165	0.0032833	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.86047	1	10765	10765		23.523	0	1	738540			21586	2835	14530	14540	24918	24918					0.12322015687641397
KKSSVVLD	8	Unmodified	_KKSSVVLD_					0	0	0		nc|ENSG00000113441|Q9UIQ6-3|LNPEP;nc|ENSG00000113441|Q9UIQ6-2|LNPEP;ENSG00000113441|ENST00000231368|LNPEP	nc|ENSG00000113441|Q9UIQ6-3|LNPEP	nc|ENSG00000113441|Q9UIQ6-3|LNPEP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2633056640625	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.7961	1	3212	3212		17.365	0	1	5350400			21587	2724	14531	14541	24919	24919					0.07010669040232642
KKSSVVLD	8	Unmodified	_KKSSVVLD_					0	0	0		nc|ENSG00000113441|Q9UIQ6-3|LNPEP;nc|ENSG00000113441|Q9UIQ6-2|LNPEP;ENSG00000113441|ENST00000231368|LNPEP	nc|ENSG00000113441|Q9UIQ6-3|LNPEP	nc|ENSG00000113441|Q9UIQ6-3|LNPEP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26275634765625	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.79929	1	3444	3444		18.324	0	1	4268300			21588	2724	14531	14541	24920	24920					0.07010669040232642
KKSTLLSG	8	Unmodified	_KKSTLLSG_					0	0	0			REV__ENST00000344120.4_1_5:141693677-141693767:-|nuORF	REV__ENST00000344120.4_1_5:141693677-141693767:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.25848388671875	2	417.258185	832.501818	0.52563	0.00021932	-0.071237	-2.9724E-05	0.45439	0.0001896	417.2580621570988	22.515	2.686	21.904	21.633	24.319	-0.6107					140	63	3	0	0	0	0.8347	1	933	933		23.042	4.7181	1	2260100	+		21589	25300	14532	14542	24921	24921					0.07886686385813846
KKSVSKAGK	9	Unmodified	_KKSVSKAGK_					0	0	0		nc|ENSG00000160401|Q5JU67-2|CFAP157;ENSG00000160401|ENST00000373295|CFAP157	nc|ENSG00000160401|Q5JU67-2|CFAP157	nc|ENSG00000160401|Q5JU67-2|CFAP157	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.7972717285156	2	466.798009	931.581465	-0.33021	-0.00015414	-0.38243	-0.00017852	-0.71264	-0.00033266	466.7976705167877	19.101	1.2721	19.028	18.843	20.115	-0.073704					70	37	3	0	0	0	0.78983	1	390	390		27.882	2.4321	1	201130			21590	5585	14533	14543	24922	24922					0.11293753059806022
KKTGVLQGH	9	Unmodified	_KKTGVLQGH_					0	0	0		ENSG00000151150|ENST00000280772|ANK3	ENSG00000151150|ENST00000280772|ANK3	ENSG00000151150|ENST00000280772|ANK3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2329406738281	2	484.287808	966.561064	0.78393	0.00037965	-1.0607	-0.0005137	-0.2768	-0.00013405	484.28724549803286	23.25	0.49603	22.831	22.575	23.071	-0.41879					23	11	3	0	0	0	0.20789	1	998	998		76.774	5.4784	1	105720			21591	5098	14534	14544	24923	24923					0.07644582399996125
KKTKKCGKSF	10	Unmodified	_KKTKKCGKSF_					0	0	0		nc|ENSG00000171469|Q8N587-2|ZNF561;ENSG00000171469|ENST00000302851|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.7902221679688	2	577.839351	1153.66415	-1.2405	-0.00071678	-2.4765	-0.001431	-3.717	-0.0021478	578.339041091337	60.232	0.93326	60.785	60.392	61.325	0.55323					44	25	2	0	0	0	0.37624	1	6476	6476		37.812	7.3079	1	463960			21592	6668	14535	14545	24924	24924					0.09346326796276117
KKTKKCGKSF	10	Unmodified	_KKTKKCGKSF_					0	0	0		nc|ENSG00000171469|Q8N587-2|ZNF561;ENSG00000171469|ENST00000302851|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	577.839351	1153.66415	-1.6803	-0.00097093	-2.3737	-0.0013716	-4.054	-0.0023426	577.8382767024984	60.354	1.325	60.743	59.931	61.256	0.38945	-0.021123	4.1413E-05	NaN	37.812	53	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	507420			21593	6668	14535	14545							0.09346326796276117
KKTKKQKHAI	10	Unmodified	_KKTKKQKHAI_					0	0	0			REV__ENSG00000137962|ENST00000260526|ARHGAP29	REV__ENSG00000137962|ENST00000260526|ARHGAP29	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9298095703125	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.014	1	47.921	47.421	48.421	-0.093178								0	0	0	0.45132	1	3630	3630		10.587	0	1		+		21594	19426	14536	14546	24925	24925					0.1756903972204782
KKTKVGAH	8	Unmodified	_KKTKVGAH_					0	0	0			REV__ENSG00000233757|ENST00000425953|ZNF892	REV__ENSG00000233757|ENST00000425953|ZNF892	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.78033447265625	2	434.771794	867.529036	-1.8935	-0.00082326	-0.4044	-0.00017582	-2.2979	-0.00099908	434.7713119880791	39.209	0.11829	39.209	39.148	39.266	0					4	2	2	0	0	0	0.4196	1	2498	2498		26.796	0	1	39261	+		21595	23775	14537	14547	24926	24926					0.08997214716839608
KKTLNPVYN	9	Unmodified	_KKTLNPVYN_					0	0	0		ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-11|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;nc|ENSG00000137501|Q9HCH5-12|SYTL2;nc|ENSG00000137501|Q9HCH5-4|SYTL2;nc|ENSG00000137501|Q9HCH5-9|SYTL2;nc|ENSG00000137501|Q9HCH5-2|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.806884765625	2	538.808574	1075.60259	-0.16838	-9.0727E-05	-3.2418	-0.0017467	-3.4102	-0.0018374	538.8067545662908	90.656	4.0484	90.725	89.127	93.176	0.069336					223	95	3	0	0	0	0.76255	1	9312	9312		35.618	1.4457	1	849020			21596	4207	14538	14548	24927	24927					0.06781718368665679
KKTMKSKKKI	10	Unmodified	_KKTMKSKKKI_					0	0	0			REV__ENST00000262971.2_1_19:4038003-4038114:+|nuORF	REV__ENST00000262971.2_1_19:4038003-4038114:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.2669372558594	3	407.268809	1218.7846	0.62105	0.00025293	-2.9937	-0.0012192	-2.3727	-0.00096631	407.2676409916638	27.271	0.70396	27.095	26.837	27.54	-0.17559					33	15	3	0	0	0	0.85979	1	1560	1560		35.178	2.4277	1	110570	+		21597	24436	14539	14549	24928	24928					0.18395734789919516
KKTMLTLTL	9	Unmodified	_KKTMLTLTL_					0	0	0		ENSG00000099219|ENST00000339450|ERMP1	ENSG00000099219|ENST00000339450|ERMP1	ENSG00000099219|ENST00000339450|ERMP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8270874023438	2	524.825378	1047.6362	1.2413	0.00065145	1.5394	0.0008079	2.7806	0.0014594	524.8261082044575	99.092	3.5228	99.14	98.41	101.93	0.047852					344	82	7	0	0	0	0.78536	1	10812	10812		29.15	3.5755	1	29910000			21598	1749	14540	14550	24929	24929					0.11429003816192562
KKTPIQKPPRK	11	Unmodified	_KKTPIQKPPRK_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2556457519531	3	440.95399	1319.84014	-1.0645	-0.00046942	-3.366	-0.0014842	-4.4305	-0.0019536	440.95226902412463	67.042	0.78723	67.095	66.916	67.703	0.052368					41	28	2	0	0	0	0.17729	1	5940	5940		17.833	0	1	79518			21599	8822	14541	14551	24930	24930					0.19301284301855048
KKTPPRKSA	9	Unmodified	_KKTPPRKSA_					0	0	0		ENST00000492576.5_1_22:39052705-39067032:+|nuORF;ENST00000475924.5_1_22:39064059-39064179:+|nuORF;ENST00000467118.1_1_22:39064011-39066786:+|nuORF;ENST00000489847.1_1_22:39052727-39066786:+|nuORF;ENST00000485501.5_1_22:39052673-39067032:+|nuORF;ENSG00000100211|ENST00000216029|CBY1;ENST00000492537.5_1_22:39052727-39067259:+|nuORF	ENST00000492576.5_1_22:39052705-39067032:+|nuORF	ENST00000492576.5_1_22:39052705-39067032:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8183898925781	2	506.816733	1011.61891	-0.90619	-0.00045927	3.564	0.0018063	2.6578	0.001347	506.81836669409296	60.86	0.69365	61.25	60.9	61.593	0.38945					52	22	3	0	0	0	0.72402	1	6490	6490		38.806	2.3594	1	2316000			21600	12704	14542	14552	24931	24931					0.1135684432541666
KKTQLPAKVP	10	Unmodified	_KKTQLPAKVP_					0	0	0			REV__ENSG00000172671|ENST00000344646|ZFAND4	REV__ENSG00000172671|ENST00000344646|ZFAND4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.3533935546875	2	555.355691	1108.69683	-0.86355	-0.00047958	-3.4797	-0.0019325	-4.3433	-0.0024121	555.3536421650435	101.16	2.3681	101.19	100.7	103.07	0.031036					166	56	5	0	0	0	0.86718	1	10828	10828		27.882	0	1	6361400	+		21601	21846	14543	14553	24932	24932					0.14682857190769028
KKTRDSCFQG	10	Unmodified	_KKTRDSCFQG_					0	0	0		ENST00000445215.5_1_22:42980332-42980422:-|nuORF	ENST00000445215.5_1_22:42980332-42980422:-|nuORF	ENST00000445215.5_1_22:42980332-42980422:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	584.9804077148438	2	585.290222	1168.56589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.987	1	66.987	66.487	67.487	0								0	0	0	0.45132	1	5915	5915		30.318	1.1682	1				21602	11820	14544	14554	24933	24933					-0.011649015195644097
KKTSNLQGSV	10	Unmodified	_KKTSNLQGSV_					0	0	0			REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF;REV__nc|ENSG00000204256|P25440-4|BRD2	REV__nc|ENSG00000204256|P25440-4|BRD2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.30029296875	2	531.301113	1060.58767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.02	1	114	113.5	114.5	-0.024452								0	0	0	0.45132	1	12624	12624		30.318	2.2362	1		+		21603	23473;27474	14545	14555	24934	24934					0.0598022650067378
KKTTGLVG	8	Unmodified	_KKTTGLVG_					0	0	0		ENST00000467117.5_1_7:123191621-123197849:-|nuORF;ENST00000492549.5_1_7:123190514-123197849:-|nuORF;ENST00000567995.1_1_16:47632668-47632902:-|nuORF;ENSG00000128609|ENST00000355749|NDUFA5	ENST00000467117.5_1_7:123191621-123197849:-|nuORF	ENST00000467117.5_1_7:123191621-123197849:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.2525329589844	2	402.252903	802.491253	2.8931	0.0011637	-3.76	-0.0015125	-0.86692	-0.00034872	402.25130095355667	20.226	0.39619	20.156	19.943	20.339	-0.070011					29	16	2	0	0	0	0.86791	1	491	491		28.254	10.889	1	78956			21604	3554	14546	14556	24935	24935					0.08210703731378999
KKTTGLVG	8	Unmodified	_KKTTGLVG_					0	0	0		ENST00000467117.5_1_7:123191621-123197849:-|nuORF;ENST00000492549.5_1_7:123190514-123197849:-|nuORF;ENST00000567995.1_1_16:47632668-47632902:-|nuORF;ENSG00000128609|ENST00000355749|NDUFA5	ENST00000467117.5_1_7:123191621-123197849:-|nuORF	ENST00000467117.5_1_7:123191621-123197849:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2523193359375	2	402.252903	802.491253	2.0255	0.00081478	-2.7001	-0.0010861	-0.67453	-0.00027133	402.2516718442352	21.748	0.98491	21.304	20.961	21.946	-0.44324					46	22	3	0	0	0	0.80706	1	817	817		19.36	1.995	1	622200			21605	3554	14546	14556	24936	24936					0.08210703731378999
KKTTGLVG	8	Unmodified	_KKTTGLVG_					0	0	0		ENST00000467117.5_1_7:123191621-123197849:-|nuORF;ENST00000492549.5_1_7:123190514-123197849:-|nuORF;ENST00000567995.1_1_16:47632668-47632902:-|nuORF;ENSG00000128609|ENST00000355749|NDUFA5	ENST00000467117.5_1_7:123191621-123197849:-|nuORF	ENST00000467117.5_1_7:123191621-123197849:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.2523193359375	2	402.252903	802.491253	-0.22147	-8.9087E-05	-0.38186	-0.00015361	-0.60333	-0.00024269	402.25258747352945	21.915	0.79237	21.3	21.026	21.818	-0.61571					42	19	3	0	0	0	0.88915	1	841	841		35.201	3.2459	1	589950			21606	3554	14546	14556	24937	24937					0.08210703731378999
KKTTGLVG	8	Unmodified	_KKTTGLVG_					0	0	0		ENST00000467117.5_1_7:123191621-123197849:-|nuORF;ENST00000492549.5_1_7:123190514-123197849:-|nuORF;ENST00000567995.1_1_16:47632668-47632902:-|nuORF;ENSG00000128609|ENST00000355749|NDUFA5	ENST00000467117.5_1_7:123191621-123197849:-|nuORF	ENST00000467117.5_1_7:123191621-123197849:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	402.252903	802.491253	-0.39234	-0.00015782	-1.7346	-0.00069776	-2.127	-0.00085558	402.2520849137824	21.073	0.1245	21.008	20.967	21.091	-0.064743	-0.19575	-6.8658E-05	NaN	19.36	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14207			21607	3554	14546	14556							0.08210703731378999
KKVANTKQ	8	Unmodified	_KKVANTKQ_					0	0	0			REV__nc|ENSG00000278970|Q8NB50-2|ZFP62	REV__nc|ENSG00000278970|Q8NB50-2|ZFP62	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	458.78265380859375	2	458.782359	915.550165	0.87378	0.00040087	-0.56177	-0.00025773	0.31201	0.00014315	458.7819477458399	20.868	0.76011	20.936	20.643	21.403	0.068251					66	31	3	0	0	0	0.36381	1	522	522		82.305	0.064519	1	281650	+		21608	23160	14547	14557	24938	24938					0.08901180025702615
KKVANTKQ	8	Unmodified	_KKVANTKQ_					0	0	0			REV__nc|ENSG00000278970|Q8NB50-2|ZFP62	REV__nc|ENSG00000278970|Q8NB50-2|ZFP62	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.78228759765625	2	458.782359	915.550165	0.041914	1.923E-05	-0.38631	-0.00017723	-0.3444	-0.000158	458.7821952343748	20.778	1.5787	20.854	20.502	22.08	0.075848					186	78	4	0	0	0	0.38363	1	527	527		90.777	0	1	8263600	+		21609	23160	14547	14557	24939	24939					0.08901180025702615
KKVARKLRP	9	Unmodified	_KKVARKLRP_					0	0	0		ENST00000424011.6_2_16:66638195-66638288:+|nuORF	ENST00000424011.6_2_16:66638195-66638288:+|nuORF	ENST00000424011.6_2_16:66638195-66638288:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3733520507812	2	548.377292	1094.74003	-1.4498	-0.00079504	-4.1619	-0.0022823	-5.6117	-0.0030773	548.3748802153438	35.47	1.1138	35.47	34.867	35.98	0					77	29	3	0	0	0	0.7932	1	2017	2017		17.365	0.89182	1	301910			21610	11507	14548	14558	24940	24940					0.19645091758729905
KKVESVAH	8	Unmodified	_KKVESVAH_					0	0	0			REV__ENSG00000182674|ENST00000523207|KCNB2	REV__ENSG00000182674|ENST00000523207|KCNB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.26055908203125	2	449.261259	896.507966	-1.381	-0.00062045	-0.0050338	-2.2615E-06	-1.3861	-0.00062271	449.26107911518943	71.508	1.165	71.892	71.126	72.291	0.38449					61	27	3	0	0	0	0.91005	1	7934	7934		42.474	1.9018	1	1175400	+		21611	22542	14549	14559	24941	24941					0.05557204617332445
KKVHPAVII	9	Unmodified	_KKVHPAVII_					0	0	0		ENST00000453977.2_1_X:24700103-24700596:+|nuORF	ENST00000453977.2_1_X:24700103-24700596:+|nuORF	ENST00000453977.2_1_X:24700103-24700596:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	502.8136901855469	2	502.834394	1003.65424	-1.6058	-0.00080743	-0.12351	-6.2105E-05	-1.7293	-0.00086953	502.8339024184101	97.23	0.50311	97.432	97.14	97.643	0.20207					15	11	2	0	0	0	0.20789	1	9998	9998		18.324	4.5491	1	57836			21612	11937	14550	14560	24942	24942					0.1525550685323651
KKVHVGLG	8	Unmodified	_KKVHVGLG_					0	0	0			REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.27008056640625	2	419.268887	836.523222	-1.8555	-0.00077795	0.079659	3.3399E-05	-1.7758	-0.00074455	419.2703589280243	49.772	0.42364	49.798	49.52	49.944	0.025574					13	10	2	0	0	0	0.85787	1	3861	3861		9.4706	0	1	53317	+		21613	29739	14551	14561	24943	24943					0.09842116205197726
KKVILKMD	8	Unmodified	_KKVILKMD_					0	0	0		nc|ENSG00000174371|Q9UQ84-4|EXO1;ENSG00000174371|ENST00000366548|EXO1	nc|ENSG00000174371|Q9UQ84-4|EXO1	nc|ENSG00000174371|Q9UQ84-4|EXO1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.9588928222656	2	487.806988	973.599423	-0.084405	-4.1173E-05	4.1731	0.0020357	4.0887	0.0019945	487.8087799168441	102.76	0.53642	102.77	102.47	103.01	0.0082016					19	12	2	0	0	0	0.4196	1	11050	11050		12.207	0.69583	1	154460			21614	6928	14552	14562	24944	24944					0.11156751990301927
KKVKKKLTY	9	Unmodified	_KKVKKKLTY_					0	0	0		ENST00000533030.1_1_11:47376780-47400013:-|nuORF;ENSG00000066336|ENST00000378538|SPI1;nc|ENSG00000066336|P17947-2|SPI1	ENST00000533030.1_1_11:47376780-47400013:-|nuORF	ENST00000533030.1_1_11:47376780-47400013:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8530883789062	2	568.381709	1134.74886	0.51247	0.00029128	1.3227	0.00075182	1.8352	0.0010431	568.3812309675212	102.44	0.48916	102.63	102.41	102.89	0.19483					14	11	2	0	0	0	0.20789	1	10764	10764		40.573	12.69	1	159050			21615	1157	14553	14563	24945	24945					0.18688020604554367
KKVKKKLTY	9	Unmodified	_KKVKKKLTY_					0	0	0		ENST00000533030.1_1_11:47376780-47400013:-|nuORF;ENSG00000066336|ENST00000378538|SPI1;nc|ENSG00000066336|P17947-2|SPI1	ENST00000533030.1_1_11:47376780-47400013:-|nuORF	ENST00000533030.1_1_11:47376780-47400013:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.8538818359375	2	568.381709	1134.74886	1.7996	0.0010229	-1.9218	-0.0010923	-0.12214	-6.9425E-05	568.3805899862973	102.47	0.66926	102.73	102.27	102.94	0.26322					35	16	3	0	0	0	0.20789	1	12380	12380		37.159	1.5408	1	501620			21616	1157	14553	14563	24946	24946					0.18688020604554367
KKVLGGHK	8	Unmodified	_KKVLGGHK_					0	0	0			REV__nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	REV__nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.2848205566406	2	433.782162	865.549771	-1.6363	-0.0007098	-1.3557	-0.00058806	-2.9919	-0.0012979	433.78173283497773	54.776	0.31876	54.832	54.614	54.933	0.055611					12	8	2	0	0	0	0.83058	1	4542	4542		12.959	0.75233	1	57641	+		21617	23457	14554	14564	24947	24947					0.11161805096514854
KKVLGKRKLR	10	Unmodified	_KKVLGKRKLR_					0	0	0			REV__ENST00000379707.7_1_9:33255219-33262163:-|nuORF	REV__ENST00000379707.7_1_9:33255219-33262163:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	409.2925720214844	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.17	1	19.147	18.647	19.647	-0.023342								0	0	0	0.45132	1	399	399		7.0187	3.1753	1		+		21618	17651	14555	14565	24948	24948					0.2472131174695278
KKVLGKRKLR	10	Unmodified	_KKVLGKRKLR_					0	0	0			REV__ENST00000379707.7_1_9:33255219-33262163:-|nuORF	REV__ENST00000379707.7_1_9:33255219-33262163:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.29205322265625	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.244	1	19.614	19.114	20.114	-0.6296								0	0	0	0.45132	1	626	626		4.0829	0.46384	1		+		21619	17651	14555	14565	24949	24949					0.2472131174695278
KKVLLLLW	8	Unmodified	_KKVLLLLW_					0	0	0		ENST00000485775.5_1_1:110582506-110596531:+|nuORF;nc|ENSG00000143093|Q5VSL9-2|STRIP1;ENSG00000143093|ENST00000369795|STRIP1;ENST00000473429.5_1_1:110584363-110592127:+|nuORF;nc|ENSG00000143093|Q5VSL9-3|STRIP1;nc|ENSG00000128578|Q9ULQ0-2|STRIP2;ENSG00000128578|ENST00000249344|STRIP2	ENST00000485775.5_1_1:110582506-110596531:+|nuORF	ENST00000485775.5_1_1:110582506-110596531:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.9060363769531	2	506.849513	1011.68447	6.0396	0.0030612	0.84999	0.00043082	6.8896	0.003492	506.84985219155243	109.04	0.45131	109.13	108.91	109.36	0.090057					38	19	3	0	0	0	0.4196	1	13295	13295		8.8223	4.1406	1	732060			21620	4600	14556	14566	24950	24950					0.17909865518413426
KKVLSHGGY	9	Unmodified	_KKVLSHGGY_					0	0	0		nc|ENSG00000163141|Q7Z465-3|BNIPL;nc|ENSG00000163141|Q7Z465-2|BNIPL;ENSG00000163141|ENST00000368931|BNIPL	nc|ENSG00000163141|Q7Z465-3|BNIPL	nc|ENSG00000163141|Q7Z465-3|BNIPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7800598144531	2	494.782359	987.550165	-0.074951	-3.7084E-05	-3.8536	-0.0019067	-3.9285	-0.0019438	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.76764	1	8675	8675		34.173	0	1	651380			21621	5770	14557	14567	24951	24951					0.05589180025708629
KKVMHILAVL	10	Unmodified	_KKVMHILAVL_					0	0	0			REV__ENST00000494880.5_1_1:185269193-185269247:-|nuORF	REV__ENST00000494880.5_1_1:185269193-185269247:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.7916259765625	2	576.370287	1150.72602	0.59397	0.00034235	-3.4505	-0.0019887	-2.8565	-0.0016464	576.3680853904931	80.601	0.47831	80.738	80.358	80.837	0.13702					14	12	2	0	0	0	0.37624	1	7634	7634		15.642	8.4485	1	44872	+		21622	27724	14558	14568	24952	24952					0.1566867821543383
KKVPVTKSQP	10	Unmodified	_KKVPVTKSQP_					0	0	0		ENST00000436970.5_1_16:87993584-88008722:+|nuORF	ENST00000436970.5_1_16:87993584-88008722:+|nuORF	ENST00000436970.5_1_16:87993584-88008722:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.3450927734375	2	556.345323	1110.67609	0.14884	8.2805E-05	-0.16931	-9.4193E-05	-0.02047	-1.1388E-05	556.3451362150047	17.953	0.56242	17.332	17.023	17.585	-0.62141					24	13	2	0	0	0	0.6116	1	336	336		49.442	3.4693	1	371980			21623	11728	14559	14569	24953	24953					0.12518266811161993
KKVREEYRKWA	11	Unmodified	_KKVREEYRKWA_					0	0	0		nc|ENSG00000123146|P48960-2|ADGRE5;nc|ENSG00000123146|P48960-3|ADGRE5;ENSG00000123146|ENST00000242786|ADGRE5	nc|ENSG00000123146|P48960-2|ADGRE5	nc|ENSG00000123146|P48960-2|ADGRE5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.28167724609375	3	498.284287	1491.83103	-1.6153	-0.00080489	-1.0641	-0.00053024	-2.6794	-0.0013351	498.2836706814712	33.272	0.88227	33.271	32.947	33.829	-0.0016365					56	20	4	0	0	0	0.77511	1	1954	1954		16.53	1.1924	1	169750			21624	3262	14560	14570	24954	24954					0.10478890945546482
KKVRPRERRAR	11	Unmodified	_KKVRPRERRAR_					0	0	0		nc|ENSG00000105953|Q02218-3|OGDH	nc|ENSG00000105953|Q02218-3|OGDH	nc|ENSG00000105953|Q02218-3|OGDH	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2853698730469	3	484.64292	1450.90693	0.35185	0.00017052	0.97896	0.00047444	1.3308	0.00064497	484.64348672009146	52.469	0.67506	52.54	52.21	52.885	0.070709					38	20	3	0	0	0	0.18034	1	4266	4266		16.53	0	1	176920			21625	14832	14561	14571	24955	24955					0.199513326363558
KKVRPRERRAR	11	Unmodified	_KKVRPRERRAR_					0	0	0		nc|ENSG00000105953|Q02218-3|OGDH	nc|ENSG00000105953|Q02218-3|OGDH	nc|ENSG00000105953|Q02218-3|OGDH	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	484.64292	1450.90693	-0.40548	-0.00019651	1.8972	0.00091949	1.4918	0.00072297	484.64374046790635	52.56	0.6986	52.486	52.142	52.84	-0.074509	-0.054483	0.0003659	NaN	16.53	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	218630			21626	14832	14561	14571							0.199513326363558
KKVSIQVR	8	Unmodified	_KKVSIQVR_					0	0	0			REV__ENSG00000151655|ENST00000358415|ITIH2	REV__ENSG00000151655|ENST00000358415|ITIH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.31298828125	2	479.313826	956.613099	-0.73483	-0.00035221	0.9249	0.00044332	0.19008	9.1108E-05	479.31418634023333	20.371	0.7595	19.741	19.536	20.295	-0.6296					23	16	2	0	0	0	0.90523	1	659	659		40.778	1.972	1	248100	+		21627	20263	14562	14572	24956	24956					0.13305745813761405
KKVSKWLFSA	10	Unmodified	_KKVSKWLFSA_					0	0	0			REV__ENST00000231134.7_2_5:140514881-140515013:+|nuORF	REV__ENST00000231134.7_2_5:140514881-140515013:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.357666015625	2	597.355691	1192.69683	0.94283	0.0005632	3.1266	0.0018677	4.0694	0.0024309	597.3571269689473	100.1	2.8225	100.31	99.04	101.86	0.21512					167	67	4	0	0	0	0.8651	1	10503	10503		25.574	2.0514	1	2588300	+		21628	24195	14563	14573	24957	24957					0.10818857190793096
KKVSPDPQK	9	Unmodified	_KKVSPDPQK_					0	0	0		ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7988891601562	2	513.800749	1025.58694	0.76399	0.00039254	-3.2735	-0.0016819	-2.5095	-0.0012894	513.7988608120447	16.288	0.21682	15.801	15.696	15.913	-0.48718					11	4	3	0	0	0	0.30689	1	112	112		64.207	5.4253	1	183230			21629	4331	14564	14574	24958	24958					0.07517431851601941
KKVTTQMI	8	Unmodified	_KKVTTQMI_					0	0	0		nc|ENSG00000133131|Q8TE76-2|MORC4;nc|ENSG00000133131|Q8TE76-3|MORC4;ENSG00000133131|ENST00000355610|MORC4	nc|ENSG00000133131|Q8TE76-2|MORC4	nc|ENSG00000133131|Q8TE76-2|MORC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.781982421875	2	474.78097	947.547388	-0.016147	-7.6664E-06	-4.0711	-0.0019329	-4.0872	-0.0019405	474.7792435080475	27.064	0.66886	26.888	26.568	27.237	-0.17559					24	14	3	0	0	0	0.90465	1	1525	1525		40.573	1.7665	1	169690			21630	3862	14565	14575	24959	24959					0.07151588576550694
KKVVIIEPPAS	11	Unmodified	_KKVVIIEPPAS_					0	0	0		ENSG00000204165|ENST00000374251|CXorf65	ENSG00000204165|ENST00000374251|CXorf65	ENSG00000204165|ENST00000374251|CXorf65	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8671264648438	2	590.868631	1179.72271	-0.76513	-0.00045209	-3.0712	-0.0018147	-3.8363	-0.0022667	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.70737	1	11396	11396		30.318	1.1477	1	54208000			21631	8420	14566	14576	24960	24960					0.14003706642415636
KKWALIHKRVR	11	Unmodified	_KKWALIHKRVR_					0	0	0		ENST00000378062.5_1_X:43808665-43809031:-|nuORF	ENST00000378062.5_1_X:43808665-43809031:-|nuORF	ENST00000378062.5_1_X:43808665-43809031:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9735412597656	3	478.977129	1433.90956	-1.5807	-0.00075714	-3.7922	-0.0018164	-5.373	-0.0025735	478.9752399041666	51.639	1.4994	51.639	50.814	52.314	0					68	39	2	0	0	0	0.79476	1	4203	4203		12.433	3.6335	1	107410			21632	10856	14567	14577	24961	24961					0.20995788041295782
KKWALIHKRVR	11	Unmodified	_KKWALIHKRVR_					0	0	0		ENST00000378062.5_1_X:43808665-43809031:-|nuORF	ENST00000378062.5_1_X:43808665-43809031:-|nuORF	ENST00000378062.5_1_X:43808665-43809031:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.30914306640625	3	478.977129	1433.90956	-1.3988	-0.00066997	-4.1053	-0.0019664	-5.5041	-0.0026363	478.9750520037149	52.203	1.7713	52.215	51.267	53.038	0.012436					94	42	3	0	0	0	0.77511	1	4623	4623		16.53	4.097	1	183680			21633	10856	14567	14577	24962	24962					0.20995788041295782
KKWALIHKRVR	11	Unmodified	_KKWALIHKRVR_					0	0	0		ENST00000378062.5_1_X:43808665-43809031:-|nuORF	ENST00000378062.5_1_X:43808665-43809031:-|nuORF	ENST00000378062.5_1_X:43808665-43809031:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2773132324219	3	478.977129	1433.90956	-0.83982	-0.00040225	-2.6224	-0.0012561	-3.4622	-0.0016583	479.31128701578314	83.85	0.55344	84.015	83.667	84.221	0.1651					20	12	2	0	0	0	0.18238	1	8105	8105		9.2118	6.0005	1	41290			21634	10856	14567	14577	24963	24963					0.20995788041295782
KKWHHIAWLLK	11	Unmodified	_KKWHHIAWLLK_					0	0	0			REV__nc|ENSG00000121749|Q8TC07|TBC1D15	REV__nc|ENSG00000121749|Q8TC07|TBC1D15	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.9588928222656	3	487.294346	1458.86121	-0.084995	-4.1418E-05	-0.2469	-0.00012031	-0.33189	-0.00016173	487.293714179967	102.85	0.81183	102.86	102.27	103.08	0.0082092					33	19	4	0	0	0	0.17911	1	11050	11050		9.2118	0.80454	1	160270	+		21635	29816	14568	14578	24964	24964					0.1501329440138761
KKWYFELI	8	Unmodified	_KKWYFELI_					0	0	0		ENSG00000198838|ENST00000634891|RYR3;nc|ENSG00000198838|Q15413-2|RYR3;nc|ENSG00000198838|Q15413-3|RYR3	ENSG00000198838|ENST00000634891|RYR3	ENSG00000198838|ENST00000634891|RYR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.31689453125	2	563.81841	1125.62227	-0.25081	-0.00014141	-0.82557	-0.00046547	-1.0764	-0.00060688	563.8170061947588	55.275	1.2619	55.238	54.668	55.929	-0.036827					46	40	2	0	0	0	0.86791	1	4669	4669		28.254	0.17279	1	166930			21636	8348	14569	14579	24965	24965					0.06448094379425129
KKYRRLIVKQF	11	Unmodified	_KKYRRLIVKQF_					0	0	0			REV__ENST00000311237.4_19:20578692-20592633:-|nuORF	REV__ENST00000311237.4_19:20578692-20592633:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.9846496582031	3	493.648789	1477.92454	0.24426	0.00012058	1.3092	0.00064627	1.5534	0.00076685	493.6494164548298	44.568	2.4513	44.545	43.895	46.346	-0.023079					82	57	2	0	0	0	0.80813	1	3518	3518		9.6461	3.6451	1	516410	+		21637	23753	14570	14580	24966	24966					0.2046923511861678
KKYRRLIVKQF	11	Unmodified	_KKYRRLIVKQF_					0	0	0			REV__ENST00000311237.4_19:20578692-20592633:-|nuORF	REV__ENST00000311237.4_19:20578692-20592633:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.6499938964844	3	493.648789	1477.92454	-0.87644	-0.00043265	2.6394	0.0013029	1.7629	0.00087027	493.64998188310005	44.669	3.6346	44.636	43.623	47.257	-0.033474					240	86	4	0	0	0	0.8498	1	3512	3512		6.001	2.5923	1	495450	+		21638	23753	14570	14580	24967	24967					0.2046923511861678
KKYRRLIVKQF	11	Unmodified	_KKYRRLIVKQF_					0	0	0			REV__ENST00000311237.4_19:20578692-20592633:-|nuORF	REV__ENST00000311237.4_19:20578692-20592633:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.9839172363281	3	493.648789	1477.92454	-0.69439	-0.00034278	2.5038	0.001236	1.8095	0.00089323	493.64986615428916	44.451	1.6231	44.46	43.725	45.348	0.0084534					108	38	3	0	0	0	0.80813	1	3171	3171		9.6461	3.6451	1	353910	+		21639	23753	14570	14580	24968	24968					0.2046923511861678
KKYRRLIVKQF	11	Unmodified	_KKYRRLIVKQF_					0	0	0			REV__ENST00000311237.4_19:20578692-20592633:-|nuORF	REV__ENST00000311237.4_19:20578692-20592633:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.64971923828125	3	493.648789	1477.92454	0.28936	0.00014284	1.4809	0.00073102	1.7702	0.00087386	493.6493656295497	44.418	1.6555	44.467	43.631	45.286	0.048996					106	39	4	0	0	0	0.88916	1	3098	3098		3.4087	0.19739	1	509790	+		21640	23753	14570	14580	24969	24969					0.2046923511861678
KLAAARPL	8	Unmodified	_KLAAARPL_					0	0	0			REV__ENST00000318789.8_1_3:71006977-71007181:-|nuORF	REV__ENST00000318789.8_1_3:71006977-71007181:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.275146484375	2	420.276712	838.538872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.452	1	46.49	45.99	46.99	0.038181								0	0	0	0.29631	1	3414	3414		25.45	4.9683	1		+		21641	24979	14571	14581	24970	24970					0.11314402722223349
KLAAKAPK	8	Unmodified	_KLAAKAPK_					0	0	0		nc|ENSG00000102038|P28370-2|SMARCA1;nc|ENSG00000102038|P28370|SMARCA1;ENSG00000102038|ENST00000371121|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.7790832519531	2	413.779088	825.543623	0.48656	0.00020133	0.21287	8.8081E-05	0.69942	0.00028941	413.77890712703544	29.48	0.64387	29.391	29.148	29.792	-0.089546					34	14	3	0	0	0	0.87479	1	1877	1877		30.504	10.022	1	211080			21642	1982	14572	14582	24971	24971					0.1238728686498689
KLAAKLDKT	9	Unmodified	_KLAAKLDKT_					0	0	0		nc|ENSG00000188266|A2RU49-2|HYKK;nc|ENSG00000188266|A2RU49-3|HYKK;ENSG00000188266|ENST00000388988|HYKK	nc|ENSG00000188266|A2RU49-2|HYKK	nc|ENSG00000188266|A2RU49-2|HYKK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.313232421875	2	494.313492	986.612431	0.9681	0.00047854	-1.2895	-0.00063741	-0.32139	-0.00015887	494.31272326897897	34.231	0.86031	34.536	34.2	35.06	0.30494					50	20	4	0	0	0	0.58668	1	2566	2566		47.657	1.6851	1	1573200			21643	7917	14573	14583	24972	24972					0.11858906374038725
KLAATKEH	8	Unmodified	_KLAATKEH_					0	0	0			REV__ENSG00000160194|ENST00000354250|NDUFV3	REV__ENSG00000160194|ENST00000354250|NDUFV3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2611389160156	2	449.261259	896.507966	-0.72218	-0.00032445	-0.93186	-0.00041865	-1.654	-0.00074309	449.2606459805973	68.937	0.66402	68.9	68.558	69.222	-0.036957					45	25	2	0	0	0	0.8621	1	6658	6658		26.693	1.2427	1	202090	+		21644	20700	14574	14584	24973	24973					0.055572046173210765
KLAATKEH	8	Unmodified	_KLAATKEH_					0	0	0			REV__ENSG00000160194|ENST00000354250|NDUFV3	REV__ENSG00000160194|ENST00000354250|NDUFV3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.259521484375	2	449.261259	896.507966	0.32639	0.00014663	-2.4806	-0.0011144	-2.1542	-0.00096779	449.259982210285	72.745	0.71985	72.787	72.415	73.135	0.042114					49	31	2	0	0	0	0.88601	1	7002	7002		34.173	5.023	1	206780	+		21645	20700	14574	14584	24974	24974					0.055572046173210765
KLAAWLAKRGP	11	Unmodified	_KLAAWLAKRGP_					0	0	0		ENST00000527141.5_1_11:66331945-66334941:-|nuORF;ENSG00000174080|ENST00000310325|CTSF	ENST00000527141.5_1_11:66331945-66334941:-|nuORF	ENST00000527141.5_1_11:66331945-66334941:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.8728637695312	2	605.874582	1209.73461	-0.46872	-0.00028398	-3.6488	-0.0022107	-4.1175	-0.0024947	605.8722201329331	100.48	2.0532	100.52	100	102.06	0.039742					113	47	4	0	0	0	0.73893	1	10656	10656		24.519	0.31644	1	1745000			21646	6907	14575	14585	24975	24975					0.13813368176238328
KLACIQLPC	9	Unmodified	_KLACIQLPC_					0	0	0			REV__ENSG00000188306|ENST00000340806|LRRIQ4	REV__ENSG00000188306|ENST00000340806|LRRIQ4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.76788330078125	2	494.769548	987.524544	-1.1886	-0.00058806	-2.4163	-0.0011955	-3.6048	-0.0017836	494.7682797443642	38.838	0.67945	39.179	38.938	39.617	0.34187					33	15	3	0	0	0	0.7932	1	3214	3214		24.203	1.166	1	588010	+		21647	22993	14576	14586	24976	24976					0.03028246187420791
KLACRKYL	8	Unmodified	_KLACRKYL_					0	0	0			REV__ENST00000379535.8_1_15:79189454-79189514:+|nuORF	REV__ENST00000379535.8_1_15:79189454-79189514:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.795166015625	2	497.796955	993.579357	-1.5279	-0.00076056	-0.78532	-0.00039093	-2.3132	-0.0011515	497.79634722185193	48.476	0.80991	48.476	47.85	48.66	0					53	20	3	0	0	0	0.85277	1	3786	3786		25.45	0	1	518630	+		21648	25922	14577	14587	24977	24977					0.08231001050330633
KLAFLFSKTRC	11	Unmodified	_KLAFLFSKTRC_					0	0	0		nc|ENSG00000291122|Q8NAP1|CASTOR3P	nc|ENSG00000291122|Q8NAP1|CASTOR3P	nc|ENSG00000291122|Q8NAP1|CASTOR3P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.5853576660156	3	438.584797	1312.73256	-0.85727	-0.00037599	1.3111	0.00057502	0.45381	0.00019903	438.58603368368296	31.551	0.945	31.631	31.297	32.242	0.079834					66	21	4	0	0	0	0.70278	1	2175	2175		31.068	0.49928	1	2788200			21649	15347	14578	14588	24978	24978					0.08870571376155567
KLAGCGGGH	9	Unmodified	_KLAGCGGGH_					0	0	0		AluY_dup34203|chr6:26214090-26214410:-|1.3262405242916455|0.493945372324254|1.42|62.0|10|3|sense	AluY_dup34203|chr6:26214090-26214410:-|1.3262405242916455|0.493945372324254|1.42|62.0|10|3|sense	AluY_dup34203|chr6:26214090-26214410:-|1.3262405242916455|0.493945372324254|1.42|62.0|10|3|sense	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	400.19647216796875	2	400.197605	798.380657	-1.2559	-0.00050262	-3.5399	-0.0014167	-4.7958	-0.0019193	400.19654936320705	82.902	0.71272	82.902	82.649	83.362	0					40	17	3	0	0	0	0.20789	1	7810	7810		38.806	0	1	809630			21650	13	14579	14589	24979	24979					-0.02659839528496377
KLAGCGGGH	9	Unmodified	_KLAGCGGGH_					0	0	0		AluY_dup34203|chr6:26214090-26214410:-|1.3262405242916455|0.493945372324254|1.42|62.0|10|3|sense	AluY_dup34203|chr6:26214090-26214410:-|1.3262405242916455|0.493945372324254|1.42|62.0|10|3|sense	AluY_dup34203|chr6:26214090-26214410:-|1.3262405242916455|0.493945372324254|1.42|62.0|10|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.19708251953125	2	400.197605	798.380657	-1.8178	-0.00072749	-3.3867	-0.0013554	-5.2045	-0.0020828	400.1965321988101	85.961	1.4792	86.146	85.747	87.226	0.18523					86	34	4	0	0	0	0.69914	1	8486	8486		40.573	3.5441	1	5691500			21651	13	14579	14589	24980	24980					-0.02659839528496377
KLAISREAN	9	Unmodified	_KLAISREAN_					0	0	0		nc|ENSG00000100266|Q9UNF0-2|PACSIN2;ENSG00000100266|ENST00000263246|PACSIN2	nc|ENSG00000100266|Q9UNF0-2|PACSIN2	nc|ENSG00000100266|Q9UNF0-2|PACSIN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2901916503906	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.76255	1	9367	9367		35.618	1.6967	1	9883700			21652	1815	14580	14590	24981	24981					0.06628261191792717
KLAKIKGTHR	10	Unmodified	_KLAKIKGTHR_					0	0	0			REV__ENST00000504698.1_1_5:33456142-33459991:+|nuORF	REV__ENST00000504698.1_1_5:33456142-33459991:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.80859375	2	576.372207	1150.72986	-1.2585	-0.00072537	-3.8824	-0.0022377	-5.1409	-0.0029631	576.3697870366432	37.093	0.76093	37.104	36.569	37.33	0.011173					27	16	2	0	0	0	0.37624	1	2475	2475		13.454	0	1	28363	+		21653	17995	14581	14591	24982	24982					0.16052484033502878
KLAKKQNTT	9	Unmodified	_KLAKKQNTT_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.314023	1030.61349	-0.68072	-0.00035146	0.32195	0.00016623	-0.35876	-0.00018524	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.76764	1	10217	10217		34.173	3.6689	1	39641000	+		21654	21390	14582	14592	24983	24983					0.09941120742928433
KLAKKQNTT	9	Unmodified	_KLAKKQNTT_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3135375976562	2	516.314023	1030.61349	-0.047196	-2.4368E-05	-0.36182	-0.00018681	-0.40901	-0.00021118	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.67345	1	10748	10748		42.396	11.892	1	63062000	+		21655	21390	14582	14592	24984	24984					0.09941120742928433
KLAKKQNTT	9	Unmodified	_KLAKKQNTT_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3138427734375	2	516.314023	1030.61349	-0.047037	-2.4286E-05	0.46194	0.00023851	0.4149	0.00021422	516.3142012916925	102.4	1.3625	102.42	101.73	103.09	0.01989					76	32	3	0	0	0	0.78124	1	10953	10953		30.318	2.0634	1	772400	+		21656	21390	14582	14592	24985	24985					0.09941120742928433
KLAKKQNTT	9	Unmodified	_KLAKKQNTT_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.313720703125	2	516.314023	1030.61349	0.876	0.00045229	-1.3141	-0.00067851	-0.43813	-0.00022621	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.77696	1	10829	10829		31.53	1.0262	1	67025000	+		21657	21390	14582	14592	24986	24986					0.09941120742928433
KLAKKQNTT	9	Unmodified	_KLAKKQNTT_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3129272460938	2	516.314023	1030.61349	-0.25799	-0.00013321	-0.28251	-0.00014586	-0.5405	-0.00027907	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.6204	3	10610	10526;10586;10610		45.972	15.469	1	82226000	+		21658	21390	14582	14592	24987;24988;24989	24989					0.09941120742928433
KLAKKQNTT	9	Unmodified	_KLAKKQNTT_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3136596679688	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.78536	1	12506	12506		29.15	5.6269	1	4038100	+		21659	21390	14582	14592	24990	24990					0.09941120742928433
KLAKPPHLIM	10	Unmodified	_KLAKPPHLIM_					0	0	0		nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8;ENSG00000124721|ENST00000327475|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.357177734375	2	574.354637	1146.69472	1.1072	0.0006359	1.0623	0.00061012	2.1694	0.001246	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.85251	2	10752	10668;10752		25.574	1.3422	1	708140			21660	3354	14583	14593	24991;24992	24992					0.1272410518133711
KLAKPPTICKI	11	Unmodified	_KLAKPPTICKI_					0	0	0		ENSG00000188316|ENST00000341276|ENO4	ENSG00000188316|ENST00000341276|ENO4	ENSG00000188316|ENST00000341276|ENO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.5872497558594	3	404.58966	1210.74715	0.18961	7.6715E-05	-2.1593	-0.00087363	-1.9697	-0.00079691	404.5886662890934	41.346	1.1707	41.315	40.657	41.828	-0.030991					72	31	3	0	0	0	0.71207	1	2972	2972		29.551	8.7136	1	279590			21661	7921	14584	14594	24993	24993					0.15020643524303523
KLAKPPTICKI	11	Unmodified	_KLAKPPTICKI_					0	0	0		ENSG00000188316|ENST00000341276|ENO4	ENSG00000188316|ENST00000341276|ENO4	ENSG00000188316|ENST00000341276|ENO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.5888977050781	3	404.58966	1210.74715	-1.2934	-0.00052329	-0.70499	-0.00028523	-1.9984	-0.00080852	404.5892229323439	41.136	1.2646	41.095	40.508	41.772	-0.04081					80	34	3	0	0	0	0.77205	1	3021	3021		17.167	0.44936	1	339150			21662	7921	14584	14594	24994	24994					0.15020643524303523
KLAKVRDN	8	Unmodified	_KLAKVRDN_					0	0	0			REV__nc|ENSG00000108312|P17480-2|UBTF	REV__nc|ENSG00000108312|P17480-2|UBTF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28765869140625	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.87479	1	10313	10313		30.504	1.3541	1	50843000	+		21663	17702	14585	14595	24995	24995					0.0874858239999412
KLAKVRDN	8	Unmodified	_KLAKVRDN_					0	0	0			REV__nc|ENSG00000108312|P17480-2|UBTF	REV__nc|ENSG00000108312|P17480-2|UBTF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28759765625	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.86677	1	9832	9832		27.882	1.0861	1	50946000	+		21664	17702	14585	14595	24996	24996					0.0874858239999412
KLAKVRDN	8	Unmodified	_KLAKVRDN_					0	0	0			REV__nc|ENSG00000108312|P17480-2|UBTF	REV__nc|ENSG00000108312|P17480-2|UBTF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2876892089844	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.87479	1	9839	9839		30.504	3.7075	1	40161000	+		21665	17702	14585	14595	24997	24997					0.0874858239999412
KLALESKIH	9	Unmodified	_KLALESKIH_					0	0	0		ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8184204101562	2	519.818941	1037.62333	-0.067594	-3.5137E-05	-1.1183	-0.00058132	-1.1859	-0.00061646	519.8182715270425	84.44	1.4919	84.888	84.056	85.547	0.44736					111	36	4	0	0	0	0.17307	1	9802	9802		79.451	2.6769	1	7125200			21666	8672	14586	14596	24998	24998					0.10602308748320866
KLALQSHD	8	Unmodified	_KLALQSHD_					0	0	0		nc|ENSG00000107938|Q3B7T1-5|EDRF1;ENSG00000107938|ENST00000356792|EDRF1;nc|ENSG00000107938|Q3B7T1-3|EDRF1;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;ENST00000525091.5_1_10:127408310-127436620:+|nuORF	nc|ENSG00000107938|Q3B7T1-5|EDRF1	nc|ENSG00000107938|Q3B7T1-5|EDRF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.2575988769531	2	456.250892	910.48723	-0.29564	-0.00013489	0.41907	0.0001912	0.12343	5.6314E-05	456.2519537843967	29.261	0.17865	29.217	29.081	29.26	-0.043095					9	6	2	0	0	0	0.4196	1	1512	1512		31.955	23.724	1	12832			21667	2381	14587	14597	24999	24999					0.028406142376638854
KLANQKRFSEF	11	Unmodified	_KLANQKRFSEF_					0	0	0		nc|ENSG00000168081|Q13519-2|PNOC;ENSG00000168081|ENST00000301908|PNOC	nc|ENSG00000168081|Q13519-2|PNOC	nc|ENSG00000168081|Q13519-2|PNOC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.30126953125	3	456.585854	1366.73573	-0.29068	-0.00013272	0.18961	8.6574E-05	-0.10107	-4.6145E-05	456.5859721092484	33.246	0.5918	33.416	32.934	33.526	0.16971					27	13	3	0	0	0	0.17273	1	2386	2386		29.551	3.4874	1	85268			21668	6368	14588	14598	25000	25000					0.0670353775451531
KLAPKPGL	8	Unmodified	_KLAPKPGL_					0	0	0			REV__nc|ENSG00000042493|P40121-2|CAPG	REV__nc|ENSG00000042493|P40121-2|CAPG	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7666320800781	2	412.273638	822.532724	0.12467	5.1397E-05	-4.1633	-0.0017164	-4.0386	-0.001665	412.2721596091392	45.128	2.1271	45.108	43.532	45.659	-0.019802					66	49	3	0	0	0	0.4196	1	3397	3397		13.775	0.81615	1	882490	+		21669	16328	14589	14599	25001	25001					0.1143588449069739
KLAQTALTV	9	Unmodified	_KLAQTALTV_					0	0	0		ENSG00000184857|ENST00000333050|TMEM186	ENSG00000184857|ENST00000333050|TMEM186	ENSG00000184857|ENST00000333050|TMEM186	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.7935791015625	2	472.792392	943.570232	1.3274	0.00062757	-1.2423	-0.00058737	0.085029	4.0201E-05	472.79163842158493	26.592	0.84707	26.252	25.702	26.549	-0.34035					32	18	3	0	0	0	0.36616	1	1473	1473		60.118	3.3972	1	164560			21670	7645	14590	14600	25002	25002					0.09618930965655181
KLAREAVARAK	11	Unmodified	_KLAREAVARAK_					0	0	0			REV__ENSG00000148843|ENST00000369797|PDCD11	REV__ENSG00000148843|ENST00000369797|PDCD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.92303466796875	3	404.922689	1211.74624	-0.36148	-0.00014637	0.96527	0.00039086	0.60379	0.00024449	404.9229767423174	26.33	2.0851	26.291	25.89	27.975	-0.038523					105	48	5	0	0	0	0.74002	1	1208	1208		24.276	0.04411	1	394560	+		21671	20142	14591	14601	25003	25003					0.14883565199579607
KLARRGGG	8	Unmodified	_KLARRGGG_					0	0	0		AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense;nc|ENSG00000154655|Q8NA19-2|L3MBTL4	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	407.7537536621094	2	407.753936	813.493319	2.6725	0.0010897	-2.3781	-0.00096969	0.29436	0.00012003	407.75292859120896	81.695	1.217	81.753	81.34	82.557	0.057816					42	27	2	0	0	0	0.85787	1	8139	8139		9.4706	0.64823	1	113240			21672	5	14592	14602	25004	25004					0.07911177259859414
KLARRGGG	8	Unmodified	_KLARRGGG_					0	0	0		AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense;nc|ENSG00000154655|Q8NA19-2|L3MBTL4	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	407.753936	813.493319	-0.18745	-7.6433E-05	0.58864	0.00024002	0.40119	0.00016359	407.7541022780606	81.846	1.1654	81.91	81.491	82.657	0.064384	0.12406	0.00050349	NaN	9.4706	41	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93862			21673	5	14592	14602							0.07911177259859414
KLARRGGG	8	Unmodified	_KLARRGGG_					0	0	0		AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense;nc|ENSG00000154655|Q8NA19-2|L3MBTL4	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	407.753936	813.493319	0.38233	0.00015589	-0.029773	-1.214E-05	0.35255	0.00014375	407.75384830456017	81.783	1.2427	81.72	81.349	82.591	-0.062943	-0.065969	-8.3151E-07	NaN	9.4706	48	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122200			21674	5	14592	14602							0.07911177259859414
KLARRGGG	8	Unmodified	_KLARRGGG_					0	0	0		AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense;nc|ENSG00000154655|Q8NA19-2|L3MBTL4	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	407.753936	813.493319	-1.8257	-0.00074444	2.0936	0.00085369	0.26793	0.00010925	407.75477887636976	81.584	1.1375	81.729	81.362	82.5	0.14513	-0.057097	0.0017308	NaN	9.4706	44	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121720			21675	5	14592	14602							0.07911177259859414
KLARRGGG	8	Unmodified	_KLARRGGG_					0	0	0		AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense;nc|ENSG00000154655|Q8NA19-2|L3MBTL4	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	407.753936	813.493319	0.56194	0.00022913	-0.83478	-0.00034038	-0.27284	-0.00011125	407.7537200095427	81.607	1.0044	81.751	81.369	82.373	0.14352	-0.035537	-0.00065732	NaN	9.4706	33	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81888			21676	5	14592	14602							0.07911177259859414
KLARRGGG	8	Unmodified	_KLARRGGG_					0	0	0		AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense;nc|ENSG00000154655|Q8NA19-2|L3MBTL4	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	407.753936	813.493319	-1.7037	-0.00069468	1.6428	0.00066987	-0.060841	-2.4808E-05	407.7547233492745	81.58	1.0468	81.695	81.352	82.399	0.11426	-0.091695	0.0013632	NaN	9.4706	32	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62389			21677	5	14592	14602							0.07911177259859414
KLARRGGG	8	Unmodified	_KLARRGGG_					0	0	0		AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense;nc|ENSG00000154655|Q8NA19-2|L3MBTL4	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|10|3|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	407.753936	813.493319	0.69915	0.00028508	0.38202	0.00015577	1.0812	0.00044085	407.75396677812586	81.519	0.40985	81.946	81.671	82.08	0.42645	0.15955	0.00033499	NaN	9.4706	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44123			21678	5	14592	14602							0.07911177259859414
KLATEKLEFV	10	Unmodified	_KLATEKLEFV_					0	0	0			REV__chr8:17924264-17924713|23|11.26|0.19|5.91|+|0|None,PCM1|2	REV__chr8:17924264-17924713|23|11.26|0.19|5.91|+|0|None,PCM1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.343017578125	2	589.344989	1176.67542	-0.6745	-0.00039751	-2.9294	-0.0017264	-3.6039	-0.002124	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.86348	1	10086	10086		31.53	3.4483	1	16185000	+		21679	15919	14593	14603	25005	25005					0.09415427371413898
KLAVLKYYKVS	11	Unmodified	_KLAVLKYYKVS_					0	0	0		ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2628479003906	3	437.939346	1310.79621	-1.2897	-0.00056483	-0.993	-0.00043487	-2.2827	-0.0009997	437.9382758298925	58.287	0.62475	58.679	58.275	58.899	0.39209					29	14	3	0	0	0	0.17273	1	6071	6071		12.957	4.5502	1	144690			21680	12378	14594	14604	25006	25006					0.15324255084897231
KLCFYLYL	8	Unmodified	_KLCFYLYL_					0	0	0		ENST00000248104.11_1_16:1413820-1414120:-|nuORF	ENST00000248104.11_1_16:1413820-1414120:-|nuORF	ENST00000248104.11_1_16:1413820-1414120:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.28564453125	2	531.788264	1061.56198	-0.087028	-4.628E-05	-0.87165	-0.00046353	-0.95867	-0.00050981	531.7866349845207	54.942	1.2791	55.51	55.153	56.432	0.56836					45	30	2	0	0	0	0.4196	1	5652	5652		20.482	0	1	1128900			21681	9279	14595	14605	25007	25007					0.033656607246712156
KLCGNLLL	8	Unmodified	_KLCGNLLL_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26507568359375	2	437.264956	872.515359	1.7622	0.00077054	0.050084	2.19E-05	1.8123	0.00079244	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.80706	1	856	856		19.36	3.7238	1	1079000	+		21682	21204	14596	14606	25008	25008					0.0740022089340755
KLCHVVKV	8	Carbamidomethyl (C)	_KLC(Carbamidomethyl (C))HVVKV_	KLC(1)HVVKV		KLC(42)HVVKV		0	1	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79559326171875	2	491.796955	981.579357	0.29464	0.0001449	-2.8698	-0.0014114	-2.5751	-0.0012664	491.7954245147593	45.248	1.2335	45.291	44.693	45.927	0.042599					75	30	3	0	0	0	0.91005	1	3261	3261		42.474	17.024	1	440250			21683	6228	14597	14607	25009	25009	77				0.08783001050346684
KLCIHKRKII	10	Unmodified	_KLCIHKRKII_					0	0	0		ENSG00000204406|ENST00000642680|MBD5;nc|ENSG00000204406|Q9P267|MBD5;nc|ENSG00000204406|Q9P267-2|MBD5	ENSG00000204406|ENST00000642680|MBD5	ENSG00000204406|ENST00000642680|MBD5	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3790893554688	2	626.407735	1250.80092	-0.053496	-3.351E-05	0.65432	0.00040987	0.60082	0.00037636	626.4093444321215	106.05	0.63997	106.05	105.93	106.57	0					18	14	2	0	0	0	0.37624	1	11047	11047		14.865	8.1293	1	194600			21684	8441	14598	14608	25010	25010					0.18554860746667146
KLCKVVAL	8	Unmodified	_KLCKVVAL_					0	0	0			REV__nc|ENSG00000122359|P50995-2|ANXA11	REV__nc|ENSG00000122359|P50995-2|ANXA11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2656555175781	2	437.283149	872.551745	0.279	0.000122	-1.184	-0.00051774	-0.90499	-0.00039574	437.2830209011865	24.09	0.30436	23.708	23.533	23.837	-0.38178					12	6	3	0	0	0	0.4196	1	1126	1126		19.36	0	1	50005	+		21685	18489	14599	14609	25011	25011					0.1103709779009705
KLCKVVAL	8	Unmodified	_KLCKVVAL_					0	0	0			REV__nc|ENSG00000122359|P50995-2|ANXA11	REV__nc|ENSG00000122359|P50995-2|ANXA11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26556396484375	2	437.283149	872.551745	1.6875	0.00073793	-3.7589	-0.0016437	-2.0713	-0.00090575	437.27982509260926	24.013	0.25052	23.478	23.343	23.594	-0.53502					8	5	2	0	0	0	0.4196	1	1135	1135		19.36	0	1	42548	+		21686	18489	14599	14609	25012	25012					0.1103709779009705
KLCLWGLLQK	10	Unmodified	_KLCLWGLLQK_					0	0	0		ENST00000246151.8_1_1:24113939-24114161:+|nuORF	ENST00000246151.8_1_1:24113939-24114161:+|nuORF	ENST00000246151.8_1_1:24113939-24114161:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2450866699219	3	401.242372	1200.70529	2.0284	0.00081388	4.373	0.0017546	6.4014	0.0025685	401.24405132963193	20.855	0.89152	20.395	20.053	20.945	-0.4591					60	20	5	0	0	0	0.2953	1	702	702		72.879	27.857	1	593280			21687	9272	14600	14610	25013	25013					0.11296087835762592
KLCRPVHTRVT	11	Unmodified	_KLCRPVHTRVT_					0	0	0		nc|ENSG00000188659|Q658L1-2|SAXO2;nc|ENSG00000188659|Q658L1|SAXO2;ENSG00000188659|ENST00000682753|SAXO2	nc|ENSG00000188659|Q658L1-2|SAXO2	nc|ENSG00000188659|Q658L1-2|SAXO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.255615234375	3	437.255563	1308.74486	2.1228	0.00092821	2.019	0.00088284	4.1419	0.0018111	437.25637206966826	97.418	2.226	97.466	96.139	98.365	0.048164					140	51	3	0	0	0	0.75121	1	10423	10423		21.78	0.94327	1	372080			21688	7946	14601	14611	25014	25014					0.10283607839164688
KLCSSAWVEDL	11	Unmodified	_KLCSSAWVEDL_					0	0	0			REV__ENST00000560374.5_1_15:83654729-83654861:-|nuORF	REV__ENST00000560374.5_1_15:83654729-83654861:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.80712890625	2	625.807913	1249.60127	0.81062	0.00050729	-2.8538	-0.0017859	-2.0431	-0.0012786	625.806094224884	74.203	1.1646	74.762	74.455	75.62	0.5589					78	27	4	0	0	0	0.39037	1	8384	8384		60.118	5.3959	1	2889400	+		21689	28760	14602	14612	25015	25015					-0.01354283782393395
KLDFPLKQCK	10	Unmodified	_KLDFPLKQCK_					0	0	0			REV__nc|ENSG00000125779|Q9BZ23-3|PANK2	REV__nc|ENSG00000125779|Q9BZ23-3|PANK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.7412109375	3	407.233765	1218.67946	1.5336	0.00062453	1.35	0.00054978	2.8836	0.0011743	407.23443987694037	24.237	0.60566	23.724	23.494	24.099	-0.51365					26	13	4	0	0	0	0.37624	1	1137	1137		18.531	3.8374	1	71467	+		21690	18667	14603	14613	25016	25016					0.07887193593478514
KLDGQPLPR	9	Unmodified	_KLDGQPLPR_					0	0	0			REV__ENST00000437621.6_1_7:1626575-1627631:+|nuORF	REV__ENST00000437621.6_1_7:1626575-1627631:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.249755859375	2	512.300916	1022.58728	-0.37376	-0.00019148	-1.0058	-0.00051527	-1.3795	-0.00070674	512.2998799338676	71.328	0.37299	71.712	71.42	71.793	0.38449					10	8	2	0	0	0	0.20789	1	7899	7899		19.997	3.5236	1	30630	+		21691	26708	14604	14614	25017	25017					0.07688851571469968
KLDILKKM	8	Unmodified	_KLDILKKM_					0	0	0			REV__nc|ENSG00000118733|Q96PB7-6|OLFM3	REV__nc|ENSG00000118733|Q96PB7-6|OLFM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.8166809082031	2	494.814813	987.615073	-1.3793	-0.0006825	1.4586	0.00072175	0.079327	3.9252E-05	494.8154183963229	31.341	0.51816	31.331	31.137	31.655	-0.010656					17	11	2	0	0	0	0.87479	1	1712	1712		30.504	1.3541	1	32936	+		21692	15405	14605	14615	25018	25018					0.12077038507345605
KLDKLAVTH	9	Unmodified	_KLDKLAVTH_					0	0	0		nc|ENSG00000150275|Q96QU1-6|PCDH15;ENSG00000150275|ENST00000644397|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.8107299804688	2	512.811116	1023.60768	-0.31997	-0.00016408	0.65577	0.00033629	0.3358	0.0001722	512.8110471997029	27.79	1.2113	27.693	27.049	28.261	-0.096947					56	27	3	0	0	0	0.15959	1	1627	1627		82.241	2.5279	1	288750			21693	5061	14606	14616	25019	25019					0.09682022231265819
KLDKLAVTH	9	Unmodified	_KLDKLAVTH_					0	0	0		nc|ENSG00000150275|Q96QU1-6|PCDH15;ENSG00000150275|ENST00000644397|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.8107299804688	2	512.811116	1023.60768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.799	1	27.544	27.044	28.044	-0.25465								0	0	0	0.069407	1	1644	1644		82.241	25.519	1				21694	5061	14606	14616	25020	25020					0.09682022231265819
KLDKLAVTH	9	Unmodified	_KLDKLAVTH_					0	0	0		nc|ENSG00000150275|Q96QU1-6|PCDH15;ENSG00000150275|ENST00000644397|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.8109741210938	2	512.811116	1023.60768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.895	1	27.64	27.14	28.14	-0.25465								0	0	0	0.032765	1	1657	1657		101.6	26.557	1				21695	5061	14606	14616	25021	25021					0.09682022231265819
KLDKLAVTHEE	11	Unmodified	_KLDKLAVTHEE_					0	0	0		nc|ENSG00000150275|Q96QU1-6|PCDH15;ENSG00000150275|ENST00000644397|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3607788085938	2	641.853709	1281.69287	7.1246	0.0045729	1.4783	0.00094886	8.6029	0.0055218	641.8540283171199	112.86	0.36639	112.87	112.77	113.14	0.01696					17	13	2	0	0	0	0.75544	1	13667	13667		20.837	0	1	25310			21696	5061	14607	14617	25022	25022					0.06328722906437179
KLDKSPKP	8	Unmodified	_KLDKSPKP_					0	0	0			REV__ENSG00000164976|ENST00000297625|MYORG	REV__ENSG00000164976|ENST00000297625|MYORG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7930603027344	2	456.779285	911.544017	-0.57314	-0.0002618	-2.3783	-0.0010863	-2.9514	-0.0013481	456.777385786547	37.79	0.29394	38.104	37.98	38.274	0.31312					9	7	2	0	0	0	0.4196	1	3050	3050		14.137	0	1	73442	+		21697	21136	14608	14618	25023	25023					0.08470661794183343
KLDRGKVN	8	Unmodified	_KLDRGKVN_					0	0	0			REV__ENST00000485889.1_1_3:37035756-37038145:+|nuORF	REV__ENST00000485889.1_1_3:37035756-37038145:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.2797546386719	2	465.279983	928.545414	-1.0328	-0.00048052	1.0243	0.00047658	-0.0084775	-3.9444E-06	465.28033562391573	88.755	1.4343	88.962	88.47	89.905	0.20731					94	33	4	0	0	0	0.87064	1	8803	8803		29.15	2.4566	1	1094400	+		21698	27534	14609	14619	25024	25024					0.07828295882950442
KLDSETLTLFI	11	Unmodified	_KLDSETLTLFI_					0	0	0			REV__ENST00000591185.5_1_16:4748919-4749165:-|nuORF	REV__ENST00000591185.5_1_16:4748919-4749165:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3607177734375	2	640.360836	1278.70712	-0.024279	-1.5547E-05	-2.8712	-0.0018386	-2.8954	-0.0018541	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.64498	1	10162	10162		39.253	6.5023	1	448130	+		21699	21461	14610	14620	25025	25025					0.07891375334725126
KLDVVHVKVMV	11	Oxidation (M)	_KLDVVHVKVM(Oxidation (M))V_		KLDVVHVKVM(1)V		KLDVVHVKVM(55)V	0	0	1			REV__nc|ENSG00000170242|Q96K76-2|USP47	REV__nc|ENSG00000170242|Q96K76-2|USP47	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8824462890625	2	641.881216	1281.74788	0.91411	0.00058675	0.99432	0.00063824	1.9084	0.001225	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.45992	1	10171	10171		54.722	10.345	1	4136300	+		21700	21638	14611	14621	25026	25026		322			0.1182743817332721
KLEAAPIN	8	Unmodified	_KLEAAPIN_					0	0	0			REV__ENST00000547016.1_1_12:80082236-80083760:-|nuORF	REV__ENST00000547016.1_1_12:80082236-80083760:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2615966796875	2	428.25036	854.486168	-1.1074	-0.00047424	-3.4049	-0.0014581	-4.5123	-0.0019324	428.2486916609851	90.404	0.27887	90.875	90.73	91.009	0.47068					11	6	3	0	0	0	0.4196	1	10749	10749		44.117	12.162	1	284750	+		21701	28543	14612	14622	25027	25027					0.05310399868744753
KLEDYKTQ	8	Unmodified	_KLEDYKTQ_					0	0	0			REV__nc|ENSG00000151725|Q71F23-2|CENPU	REV__nc|ENSG00000151725|Q71F23-2|CENPU	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.768310546875	2	512.769114	1023.52368	0.92826	0.00047598	-0.98997	-0.00050762	-0.061706	-3.1641E-05	512.7684512724358	22.716	0.75475	22.297	21.97	22.725	-0.41879					42	17	4	0	0	0	0.87922	1	970	970		31.955	1.4512	1	536540	+		21702	20266	14613	14623	25028	25028					0.01285446343717922
KLEEESFKMK	10	Unmodified	_KLEEESFKMK_					0	0	0		nc|ENSG00000185989|Q14644-2|RASA3;ENSG00000185989|ENST00000334062|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.3068542480469	3	423.556684	1267.64822	1.0183	0.00043129	3.2201	0.0013639	4.2384	0.0017952	423.5581264470283	20.328	0.36678	19.869	19.687	20.053	-0.4591					9	7	2	0	0	0	0.37624	1	633	633		18.531	2.6104	1	23886			21703	7767	14614	14624	25029	25029					0.02510575768747003
KLEEFLLTL	9	Unmodified	_KLEEFLLTL_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.332275390625	2	553.328808	1104.64306	2.7435	0.0015181	3.7877	0.0020958	6.5312	0.0036139	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.6204	1	10444	10444		45.972	13.16	1	4237100	+		21704	16914	14615	14625	25030	25030					0.09492639968425465
KLEESRSKL	9	Unmodified	_KLEESRSKL_					0	0	0		nc|ENSG00000153936|Q7LGA3-3|HS2ST1;ENSG00000153936|ENST00000370550|HS2ST1	nc|ENSG00000153936|Q7LGA3-3|HS2ST1	nc|ENSG00000153936|Q7LGA3-3|HS2ST1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3169555664062	2	545.316763	1088.61897	1.1684	0.00063715	-1.2999	-0.00070886	-0.1315	-7.1708E-05	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.78528	1	8935	8935		29.17	2.4771	1	4705800			21705	5247	14616	14626	25031	25031					0.07820799534783873
KLEGLFARFL	10	Unmodified	_KLEGLFARFL_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.3585815429688	2	597.355691	1192.69683	0.89295	0.00053341	3.2215	0.0019244	4.1144	0.0024578	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.80179	1	10425	10425		39.253	11.371	1	2674200	+		21706	23882	14617	14627	25032	25032					0.10818857190793096
KLEGRPLKTET	11	Unmodified	_KLEGRPLKTET_					0	0	0			REV__ENST00000489020.1_1_1:20810886-20811114:-|nuORF	REV__ENST00000489020.1_1_1:20810886-20811114:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.3046569824219	3	424.58211	1270.7245	0.90361	0.00038366	1.8483	0.00078477	2.7519	0.0011684	424.91756080637094	23.16	0.39636	22.741	22.412	22.808	-0.41879					12	9	2	0	0	0	0.17365	1	972	972		26.75	11.412	1	33360	+		21707	27610	14618	14628	25033	25033					0.09996715660395239
KLEKCSWWIK	10	Unmodified	_KLEKCSWWIK_					0	0	0			REV__ENST00000380319.2_1_X:15768116-15782978:+|nuORF	REV__ENST00000380319.2_1_X:15768116-15782978:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.90972900390625	3	440.909281	1319.70601	0.58087	0.00025611	-0.45934	-0.00020253	0.12153	5.3584E-05	440.9088569625531	15.362	0.20113	15.337	15.248	15.45	-0.024207					10	6	2	0	0	0	0.69342	1	23	23		45.022	13.954	1	200970	+		21708	25946	14619	14629	25034	25034					0.058948824848130243
KLEKIKANPL	10	Unmodified	_KLEKIKANPL_					0	0	0			REV__nc|ENSG00000135945|Q9UBZ9-3|REV1	REV__nc|ENSG00000135945|Q9UBZ9-3|REV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.3687744140625	2	577.368798	1152.72304	-0.96039	-0.0005545	-2.9913	-0.0017271	-3.9517	-0.0022816	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.85466	1	11088	11088		20.947	0.91646	1	9850700	+		21709	19272	14620	14630	25035	25035					0.15279126362247553
KLEKIPPGAF	10	Unmodified	_KLEKIPPGAF_					0	0	0		ENSG00000174348|ENST00000312553|PODN;nc|ENSG00000174348|Q7Z5L7-2|PODN;nc|ENSG00000174348|Q7Z5L7-3|PODN;nc|ENSG00000174348|Q7Z5L7-4|PODN	ENSG00000174348|ENST00000312553|PODN	ENSG00000174348|ENST00000312553|PODN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.3277587890625	2	550.329142	1098.64373	-0.4914	-0.00027043	-3.2081	-0.0017655	-3.6995	-0.0020359	550.3274966608972	100.46	1.192	100.46	99.887	101.08	0					71	27	3	0	0	0	0.8651	1	10174	10174		25.574	2.0514	1	339490			21710	6926	14621	14631	25036	25036					0.09835479408116043
KLEKLLSI	8	Unmodified	_KLEKLLSI_					0	0	0			REV__ENST00000567351.5_2_17:73997368-73998786:+|nuORF	REV__ENST00000567351.5_2_17:73997368-73998786:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2874755859375	2	472.312961	942.611368	-0.108	-5.1011E-05	-0.97754	-0.0004617	-1.0855	-0.00051271	472.312888707614	95.423	0.40585	95.489	95.265	95.671	0.06591					12	9	3	0	0	0	0.4196	1	9975	9975		15.642	0	1	218190	+		21711	23871	14622	14632	25037	25037					0.13776692005137647
KLEKRNETNK	10	Unmodified	_KLEKRNETNK_					0	0	0			REV__ENSG00000179008|ENST00000321731|C14orf39	REV__ENSG00000179008|ENST00000321731|C14orf39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.5757141113281	3	420.573726	1258.69935	-0.42349	-0.00017811	4.2689	0.0017954	3.8454	0.0016173	420.5754266268904	46.91	0.91414	46.822	46.39	47.304	-0.087646					74	26	4	0	0	0	0.86621	1	3520	3520		26.063	0.9374	1	1050400	+		21712	22308	14623	14633	25038	25038					0.08034660857788367
KLELEKQVF	9	Unmodified	_KLELEKQVF_					0	0	0		ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3292236328125	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.67345	1	9216	9216		42.396	9.5837	1	11042000			21713	1962	14624	14634	25039	25039					0.0881915819995811
KLELEKQVF	9	Unmodified	_KLELEKQVF_					0	0	0		ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3298950195312	2	567.331882	1132.64921	-0.50942	-0.00028901	-1.8517	-0.0010506	-2.3612	-0.0013396	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.69624	1	10834	10834		40.778	1.5253	1	5685000			21714	1962	14624	14634	25040	25040					0.0881915819995811
KLELHRRTP	9	Unmodified	_KLELHRRTP_					0	0	0			REV__chrX:153930218-153930763|16|65.38|0.0|22.64|-|1|None,NAA10|2	REV__chrX:153930218-153930763|16|65.38|0.0|22.64|-|1|None,NAA10|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.3453369140625	2	575.346189	1148.67783	0.61456	0.00035358	-1.5799	-0.00090899	-0.96535	-0.00055541	575.3451796941858	98.405	2.0882	98.633	98.17	100.26	0.22787					146	48	5	0	0	0	0.7932	1	10187	10187		25.574	3.8883	1	2884500	+		21715	15947	14625	14635	25041	25041					0.10943320619730912
KLELHRRTP	9	Unmodified	_KLELHRRTP_					0	0	0			REV__chrX:153930218-153930763|16|65.38|0.0|22.64|-|1|None,NAA10|2	REV__chrX:153930218-153930763|16|65.38|0.0|22.64|-|1|None,NAA10|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.345458984375	2	575.346189	1148.67783	1.1925	0.00068607	-1.8408	-0.0010591	-0.64836	-0.00037303	575.3450411705345	98.393	1.0962	98.77	98.327	99.423	0.37678					95	26	5	0	0	0	0.77244	1	11931	11931		32.812	0.85756	1	3337700	+		21716	15947	14625	14635	25042	25042					0.10943320619730912
KLELRRKQF	9	Unmodified	_KLELRRKQF_					0	0	0		ENSG00000163634|ENST00000295899|THOC7	ENSG00000163634|ENST00000295899|THOC7	ENSG00000163634|ENST00000295899|THOC7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.58758544921875	3	406.587418	1216.74043	0.5758	0.00023411	0.0318	1.2929E-05	0.6076	0.00024704	406.5873508642622	24.247	1.5285	24.302	23.869	25.398	0.055485					100	43	4	0	0	0	0.77696	1	885	885		31.53	3.4483	1	404210			21717	5843	14626	14636	25043	25043					0.1407246668791231
KLELTVLP	8	Unmodified	_KLELTVLP_					0	0	0			REV__ENST00000258534.12_1_12:102316939-102317011:+|nuORF	REV__ENST00000258534.12_1_12:102316939-102317011:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7921142578125	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.758	1	49.784	49.284	50.284	0.025574								0	0	0	0.29498	1	3869	3869		26.796	8.4717	1		+		21718	24357	14627	14637	25044	25044					0.10984716596738053
KLELVVRGLPK	11	Unmodified	_KLELVVRGLPK_					0	0	0			REV__ENST00000492149.1_1_10:81107262-81109515:+|nuORF	REV__ENST00000492149.1_1_10:81107262-81109515:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.9223937988281	3	417.943091	1250.80744	-1.7719	-0.00074056	-3.0767	-0.0012859	-4.8486	-0.0020264	417.9416012633946	105.14	0.38603	105.3	105.09	105.47	0.15924					13	9	2	0	0	0	0.17586	1	11191	11191		8.0344	0	1	176770	+		21719	17698	14628	14638	25045	25045					0.19207077179044063
KLEMLKVTT	9	Unmodified	_KLEMLKVTT_					0	0	0			REV__ENSG00000073598|ENST00000158009|FNDC8	REV__ENSG00000073598|ENST00000158009|FNDC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.81689453125	2	531.81501	1061.61547	1.1723	0.00062347	2.3095	0.0012282	3.4818	0.0018517	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.75725	2	9041	9041;9102		36.447	2.3803	1	4413000	+		21720	16674	14629	14639	25046;25047	25046					0.08712413436524002
KLEMLKVTT	9	Unmodified	_KLEMLKVTT_					0	0	0			REV__ENSG00000073598|ENST00000158009|FNDC8	REV__ENSG00000073598|ENST00000158009|FNDC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8167724609375	2	531.81501	1061.61547	0.7269	0.00038658	2.7319	0.0014529	3.4588	0.0018394	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.68711	2	8731	8731;8947		41.427	7.911	1	4496300	+		21721	16674	14629	14639	25048;25049	25048					0.08712413436524002
KLENLSSSEM	10	Unmodified	_KLENLSSSEM_					0	0	0		ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.27490234375	2	569.276446	1136.53834	0.4898	0.00027883	-3.3377	-0.0019001	-2.8479	-0.0016213	569.2744694870318	58.537	1.2979	58.647	58.343	59.641	0.11027					132	48	4	0	0	0	0.63899	1	4973	4973		47.96	2.0076	1	2907600			21722	6654	14630	14640	25050	25050					-0.024468495704468296
KLEQIKKGY	9	Unmodified	_KLEQIKKGY_					0	0	0		nc|ENSG00000068366|O60488|ACSL4;ENSG00000068366|ENST00000672401|ACSL4	nc|ENSG00000068366|O60488|ACSL4	nc|ENSG00000068366|O60488|ACSL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.829345703125	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.76255	1	8929	8929		35.618	1.4457	1	1489800			21723	14770	14631	14641	25051	25051					0.10094577919812764
KLEQLKPRA	9	Unmodified	_KLEQLKPRA_					0	0	0		ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.8380737304688	2	541.837665	1081.66078	0.022744	1.2324E-05	0.836	0.00045297	0.85874	0.0004653	541.8375708786058	35.971	1.1022	36.222	35.634	36.736	0.25101					76	27	4	0	0	0	0.24527	1	2776	2776		69.628	0	1	2361700			21724	6723;4170	14632	14642	25052	25052					0.12321400013956918
KLERARTD	8	Unmodified	_KLERARTD_					0	0	0			REV__nc|ENSG00000170776|Q12802-4|AKAP13	REV__nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7806701660156	2	494.780348	987.546142	-0.78615	-0.00038897	0.80482	0.00039821	0.018664	9.2345E-06	494.78060020608814	86.18	3.7368	86.627	85.355	89.092	0.44736					160	91	3	0	0	0	0.87064	1	10141	10141		29.15	1.2673	1	656610	+		21725	21686	14633	14643	25053	25053					0.051870905319901794
KLERELTAM	9	Unmodified	_KLERELTAM_					0	0	0			REV__ENSG00000187860|ENST00000338306|CCDC157	REV__ENSG00000187860|ENST00000338306|CCDC157	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3170776367188	2	545.799891	1089.58523	-0.63872	-0.00034862	-4.4063	-0.002405	-5.045	-0.0027536	545.7973140755806	92.12	0.65476	92.12	91.675	92.33	0					18	14	2	0	0	0	0.20789	1	9030	9030		20.947	0	1	57941	+		21726	22957	14634	14644	25054	25054					0.0440205477134441
KLESEKLN	8	Unmodified	_KLESEKLN_					0	0	0		ENST00000533345.5_1_11:12419899-12534890:+|nuORF;ENSG00000197702|ENST00000334956|PARVA	ENST00000533345.5_1_11:12419899-12534890:+|nuORF	ENST00000533345.5_1_11:12419899-12534890:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.8006591796875	2	480.771657	959.528761	2.048	0.00098464	0.18899	9.0859E-05	2.237	0.0010755	480.7715539913511	95.552	0.54302	95.494	95.306	95.849	-0.057526					15	12	2	0	0	0	0.4196	1	10198	10198		26.693	1.1189	1	47315			21727	8190	14635	14645	25055	25055					0.047377502063341126
KLESKNLKF	9	Unmodified	_KLESKNLKF_					0	0	0			REV__ENST00000468373.1_1_1:153516388-153518231:-|nuORF	REV__ENST00000468373.1_1_1:153516388-153518231:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8304443359375	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.77696	1	9212	9212		31.53	2.3598	1	6029400	+		21728	23095	14636	14646	25056	25056					0.10094577919812764
KLETTKKP	8	Unmodified	_KLETTKKP_					0	0	0		ENSG00000155827|ENST00000389120|RNF20	ENSG00000155827|ENST00000389120|RNF20	ENSG00000155827|ENST00000389120|RNF20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7939147949219	2	472.792392	943.570232	0.0067678	3.1997E-06	0.020105	9.5055E-06	0.026873	1.2705E-05	472.79235257019036	26.57	0.85389	26.394	25.983	26.837	-0.17559					29	18	2	0	0	0	0.91982	1	1458	1458		45.972	8.9438	1	145100			21729	5343	14637	14647	25057	25057					0.0961893096566655
KLETVSLEL	9	Unmodified	_KLETVSLEL_					0	0	0			REV__ENSG00000161594|ENST00000293303|KLHL10	REV__ENSG00000161594|ENST00000293303|KLHL10	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.2999877929688	2	516.30279	1030.59103	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.627	1	62.741	62.241	63.241	0.11388								0	0	0	0.29134	1	5458	5458		34.173	5.023	1		+		21730	20769	14638	14648	25058	25058					0.07695476554658853
KLEVLLDLVR	10	Unmodified	_KLEVLLDLVR_					0	0	0		ENST00000491390.1_1_1:160326558-160326678:+|nuORF	ENST00000491390.1_1_1:160326558-160326678:+|nuORF	ENST00000491390.1_1_1:160326558-160326678:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3796997070312	2	599.381906	1196.74926	0.97491	0.00058434	-4.0729	-0.0024412	-3.098	-0.0018569	599.3792959797308	103.23	2.9032	103.41	102.97	105.87	0.18297					219	73	5	0	0	0	0.86587	1	10897	10897		29.17	0	1	22539000			21731	12685	14639	14649	25059	25059					0.15875395533726078
KLEYEEHKKEY	11	Unmodified	_KLEYEEHKKEY_					0	0	0		ENSG00000165113|ENST00000376371|GKAP1;nc|ENSG00000165113|Q5VSY0-2|GKAP1	ENSG00000165113|ENST00000376371|GKAP1	ENSG00000165113|ENST00000376371|GKAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	499.5852355957031	3	499.252429	1494.73546	-0.72196	-0.00036044	-2.6622	-0.0013291	-3.3842	-0.0016896	499.2509582793171	47.122	0.63241	47.095	46.766	47.398	-0.026737					33	16	3	0	0	0	0.72892	1	3904	3904		26.75	3.3718	1	193140			21732	6047	14640	14650	25060	25060					0.007880732439843996
KLFAVQFSN	9	Unmodified	_KLFAVQFSN_					0	0	0			REV__ENSG00000118420|ENST00000369747|UBE3D	REV__ENSG00000118420|ENST00000369747|UBE3D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.2918701171875	2	527.290017	1052.56548	0.03769	1.9874E-05	-0.23929	-0.00012617	-0.2016	-0.0001063	527.289714141244	52.998	0.5777	53.612	53.324	53.902	0.61436					31	13	3	0	0	0	0.33718	1	5374	5374		62.107	19.711	1	1020800	+		21733	18309	14641	14651	25061	25061					0.04130046822888289
KLFCFLMR	8	Carbamidomethyl (C),Oxidation (M)	_KLFC(Carbamidomethyl (C))FLM(Oxidation (M))R_	KLFC(1)FLMR	KLFCFLM(1)R	KLFC(53)FLMR	KLFCFLM(53)R	0	1	1			REV__ENST00000523701.1_1_8:104414285-104414333:-|nuORF	REV__ENST00000523701.1_1_8:104414285-104414333:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.796142578125	2	565.796097	1129.57764	0.82828	0.00046864	-1.004	-0.00056806	-0.17573	-9.9425E-05	565.7953584324353	67.212	1.0229	67.597	67.202	68.225	0.38515					61	28	3	0	0	0	0.93786	1	7348	7348		53.351	9.2347	1	1529300	+		21734	28145	14642	14652	25062	25062	342				0.018036239700904844
KLFDFVNAKK	10	Unmodified	_KLFDFVNAKK_					0	0	0		ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	ENSG00000149136|ENST00000278412|SSRP1	ENSG00000149136|ENST00000278412|SSRP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.93060302734375	3	403.904524	1208.69174	0.28328	0.00011442	-2.2485	-0.00090818	-1.9652	-0.00079376	403.903479705117	43.434	0.72054	43.884	43.519	44.239	0.45025					41	17	3	0	0	0	0.010628	1	3925	3925		97.597	61.15	1	1696800			21735	5000	14643	14653	25063	25063					0.09574553328161528
KLFDFVNAKK	10	Unmodified	_KLFDFVNAKK_					0	0	0		ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	ENSG00000149136|ENST00000278412|SSRP1	ENSG00000149136|ENST00000278412|SSRP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92144775390625	3	403.904524	1208.69174	-1.9667	-0.00079435	0.36808	0.00014867	-1.5986	-0.00064568	403.90454378979007	43.228	0.72054	44.002	43.582	44.303	0.7738					41	17	4	0	0	0	0.37624	1	3921	3921		54.343	25.098	1	2083900			21736	5000	14643	14653	25064	25064					0.09574553328161528
KLFDHAVSKF	10	Unmodified	_KLFDHAVSKF_					0	0	0		nc|ENSG00000068366|O60488|ACSL4;ENSG00000068366|ENST00000672401|ACSL4	nc|ENSG00000068366|O60488|ACSL4	nc|ENSG00000068366|O60488|ACSL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.3301391601562	2	596.329673	1190.64479	-1.7191	-0.0010252	0.75075	0.00044769	-0.96836	-0.00057746	596.3298756443819	41.896	0.77703	42.31	42.085	42.863	0.4139					40	19	4	0	0	0	0.0013146	2	3701	3701;3713		138.06	55.822	1	1141600			21737	14770	14644	14654	25065;25066	25065					0.0570969377702113
KLFDHAVSKF	10	Unmodified	_KLFDHAVSKF_					0	0	0		nc|ENSG00000068366|O60488|ACSL4;ENSG00000068366|ENST00000672401|ACSL4	nc|ENSG00000068366|O60488|ACSL4	nc|ENSG00000068366|O60488|ACSL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.32958984375	2	596.329673	1190.64479	-1.8088	-0.0010786	0.83722	0.00049926	-0.97156	-0.00057937	596.3299447797345	41.727	0.81123	42.361	42.135	42.946	0.6339					37	20	3	0	0	0	0.010822	2	3689	3689;3700		131.12	43.419	1	1192600			21738	14770	14644	14654	25067;25068	25067					0.0570969377702113
KLFDKLLEY	9	Unmodified	_KLFDKLLEY_					0	0	0		nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-6|API5;ENSG00000166181|ENST00000531273|API5;ENST00000397055.2_1_2:178862247-178862907:-|nuORF	nc|ENSG00000166181|Q9BZZ5-3|API5	nc|ENSG00000166181|Q9BZZ5-3|API5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.8338623046875	2	584.834257	1167.65396	-0.82825	-0.00048439	1.0996	0.00064306	0.2713	0.00015867	584.8345275330304	65.268	0.79929	65.654	65.192	65.992	0.38614					78	21	5	0	0	0	1.0243E-05	6	7060	7049;7060;7072;7083;7095;7105		155.58	62.389	1	2444200			21739	6166	14645	14655	25069;25070;25071;25072;25073;25074	25070					0.07684042342702924
KLFDKLLEY	9	Unmodified	_KLFDKLLEY_					0	0	0		nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-6|API5;ENSG00000166181|ENST00000531273|API5;ENST00000397055.2_1_2:178862247-178862907:-|nuORF	nc|ENSG00000166181|Q9BZZ5-3|API5	nc|ENSG00000166181|Q9BZZ5-3|API5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.8341674804688	2	584.834257	1167.65396	-0.16966	-9.9222E-05	0.10267	6.0046E-05	-0.066986	-3.9176E-05	584.8339433295037	65.15	0.82832	65.703	65.297	66.125	0.55294					77	22	5	0	0	0	0.0081198	5	7072	7061;7072;7089;7101;7116		134.77	55.704	1	2408000			21740	6166	14645	14655	25075;25076;25077;25078;25079	25076					0.07684042342702924
KLFETSSTR	9	Unmodified	_KLFETSSTR_					0	0	0		ENSG00000178795|ENST00000315938|GDPD4;nc|ENSG00000178795|Q6W3E5|GDPD4	ENSG00000178795|ENST00000315938|GDPD4	ENSG00000178795|ENST00000315938|GDPD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.7882080078125	2	534.787838	1067.56112	0.41384	0.00022131	-0.36856	-0.0001971	0.045274	2.4212E-05	534.7875118397072	29.033	1.0827	28.859	28.365	29.448	-0.17336					49	25	4	0	0	0	0.36616	1	1815	1815		60.118	1.8883	1	542710			21741	7224	14646	14656	25080	25080					0.03004537609331237
KLFGLRGR	8	Unmodified	_KLFGLRGR_					0	0	0		ENST00000308330.2_1_12:65564134-65564248:+|nuORF	ENST00000308330.2_1_12:65564134-65564248:+|nuORF	ENST00000308330.2_1_12:65564134-65564248:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.7187194824219	2	473.800886	945.587219	0.5122	0.00024268	-2.1854	-0.0010355	-1.6732	-0.00079278	473.7996338068988	23.856	0.29472	23.282	23.178	23.472	-0.57415					10	6	2	0	0	0	0.4196	1	1091	1091		18.324	4.5491	1	39788			21742	9886	14647	14657	25081	25081					0.11224896362125492
KLFHLHLS	8	Unmodified	_KLFHLHLS_					0	0	0			REV__ENST00000336314.8_2_5:154196057-154196288:+|nuORF	REV__ENST00000336314.8_2_5:154196057-154196288:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.7955627441406	2	497.795269	993.575986	-0.21329	-0.00010617	1.5343	0.00076377	1.321	0.0006576	497.7957318764316	48.396	0.83173	48.303	47.807	48.639	-0.093178					51	20	3	0	0	0	0.87922	1	3707	3707		31.955	8.9124	1	388480	+		21743	25189	14648	14658	25082	25082					0.0789407426799471
KLFIGGLSF	9	Unmodified	_KLFIGGLSF_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3;ENSG00000170144|ENST00000392524|HNRNPA3	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.2925109863281	2	491.292028	980.569503	-0.66115	-0.00032482	0.4797	0.00023567	-0.18145	-8.9143E-05	491.291974210051	81.498	0.98003	81.643	81.188	82.168	0.14513					46	22	3	0	0	0	0.15959	4	7812	7790;7800;7812;7824		82.241	28.303	1	476370			21744	3232;12258	14649	14659	25083;25084;25085;25086	25085					0.07844136316634831
KLFIGGLSF	9	Unmodified	_KLFIGGLSF_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3;ENSG00000170144|ENST00000392524|HNRNPA3	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.2929382324219	2	491.292028	980.569503	0.62066	0.00030493	-0.72867	-0.00035799	-0.10801	-5.3064E-05	491.2913246587003	81.508	1.4609	81.652	80.781	82.242	0.14352					58	33	3	0	0	0	0.12652	1	7812	7812		87.754	18.967	1	435480			21745	3232;12258	14649	14659	25087	25087					0.07844136316634831
KLFIGGLSF	9	Unmodified	_KLFIGGLSF_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3;ENSG00000170144|ENST00000392524|HNRNPA3	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.2926025390625	2	491.292028	980.569503	-1.4159	-0.00069562	1.5591	0.00076597	0.1432	7.0352E-05	491.29239944880294	81.492	0.93929	81.606	81.242	82.181	0.11426					49	21	3	0	0	0	0.049188	3	7759	7749;7759;7772		108.09	42.284	1	413260			21746	3232;12258	14649	14659	25088;25089;25090	25089					0.07844136316634831
KLFIGGLSF	9	Unmodified	_KLFIGGLSF_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3;ENSG00000170144|ENST00000392524|HNRNPA3	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	491.292028	980.569503	-1.074	-0.00052762	0.36452	0.00017909	-0.70943	-0.00034854	491.2917838268137	81.849	0.69012	81.849	81.492	82.182	0	0.16762	-0.00016741	NaN	108.09	27	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72144			21747	3232;12258	14649	14659							0.07844136316634831
KLFIGGLSF	9	Unmodified	_KLFIGGLSF_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3;ENSG00000170144|ENST00000392524|HNRNPA3	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	491.292028	980.569503	-0.080404	-3.9502E-05	1.2043	0.00059167	1.1239	0.00055217	491.2918299767314	81.771	0.98793	81.835	81.186	82.174	0.064384	0.15352	0.00065777	NaN	108.09	35	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72130			21748	3232;12258	14649	14659							0.07844136316634831
KLFIGGLSF	9	Unmodified	_KLFIGGLSF_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3;ENSG00000170144|ENST00000392524|HNRNPA3	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	491.292028	980.569503	0.50498	0.00024809	0.51032	0.00025072	1.0153	0.00049881	491.2913313399583	81.831	1.1541	81.768	81.305	82.459	-0.062943	0.086076	-2.4143E-05	NaN	108.09	40	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73889			21749	3232;12258	14649	14659							0.07844136316634831
KLFIGGLSF	9	Unmodified	_KLFIGGLSF_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3;ENSG00000170144|ENST00000392524|HNRNPA3	ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	491.292028	980.569503	-0.1408	-6.9175E-05	0.11043	5.4252E-05	-0.030375	-1.4923E-05	491.29132470390823	80.892	0.48513	81.418	81.203	81.688	0.52676	-0.26305	-0.00041707	NaN	108.09	16	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161310			21750	3232;12258	14649	14659							0.07844136316634831
KLFLKKPSETQ	11	Unmodified	_KLFLKKPSETQ_					0	0	0		nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;ENSG00000006125|ENST00000610402|AP2B1	nc|ENSG00000006125|P63010-3|AP2B1	nc|ENSG00000006125|P63010-3|AP2B1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.72882080078125	3	440.262489	1317.76564	-1.5465	-0.00068085	4.4102	0.0019416	2.8637	0.0012608	440.59784319689544	34.666	0.085159	34.705	34.661	34.746	0.038639					5	3	2	0	0	0	0.17729	1	1765	1765		23.378	11.446	1	65597			21751	695	14650	14660	25091	25091					0.11946476699836239
KLFLSLQNL	9	Unmodified	_KLFLSLQNL_					0	0	0		ENST00000376062.6_1_20:30310076-30310181:-|nuORF	ENST00000376062.6_1_20:30310076-30310181:-|nuORF	ENST00000376062.6_1_20:30310076-30310181:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.326904296875	2	538.329142	1074.64373	-0.54037	-0.0002909	-3.5463	-0.0019091	-4.0867	-0.0022	538.3271646052639	101.22	3.8034	101.22	100.55	104.36	0					314	93	6	0	0	0	0.78983	1	10522	10522		27.882	0	1	48186000			21752	10813	14651	14661	25092	25092					0.10939479408125408
KLFNVKMEPKT	11	Unmodified	_KLFNVKMEPKT_					0	0	0			REV__ENSG00000198825|ENST00000650623|INPP5F	REV__ENSG00000198825|ENST00000650623|INPP5F	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2597351074219	3	445.588207	1333.74279	1.3975	0.00062272	1.8017	0.00080283	3.1993	0.0014256	445.58879253736865	34.81	0.5474	35.192	34.934	35.482	0.3812					19	13	2	0	0	0	0.17272	1	2618	2618		20.315	0	1	127810	+		21753	23389	14652	14662	25093	25093					0.08927134310692963
KLFPMKLSL	9	Unmodified	_KLFPMKLSL_					0	0	0		ENST00000472839.6_1_12:92823593-92823743:+|nuORF	ENST00000472839.6_1_12:92823593-92823743:+|nuORF	ENST00000472839.6_1_12:92823593-92823743:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3269653320312	2	538.830463	1075.64637	1.2456	0.00067119	-4.3467	-0.0023421	-3.1011	-0.001671	538.8281601530243	103.48	1.1033	103.52	103.03	104.13	0.041481					47	26	2	0	0	0	0.20789	1	11169	11169		6.3127	0	1	453980			21754	12271	14653	14663	25094	25094					0.11157611541443657
KLFQFIKT	8	Unmodified	_KLFQFIKT_					0	0	0			REV__nc|ENSG851|Q9QC07|ERVK-18_pol	REV__nc|ENSG851|Q9QC07|ERVK-18_pol	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.8109130859375	2	512.813128	1023.6117	-0.31997	-0.00016408	-3.2665	-0.0016751	-3.5864	-0.0018392	512.8110471997029	27.79	1.2113	27.693	27.049	28.261	-0.096947					56	27	3	0	0	0	0.93293	1	1651	1651		51.335	1.8939	1	288750	+		21755	30312	14654	14664	25095	25095					0.10084111724984268
KLFQKWQK	8	Unmodified	_KLFQKWQK_					0	0	0			REV__ENST00000466974.5_1_20:5922633-5923195:-|nuORF	REV__ENST00000466974.5_1_20:5922633-5923195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3321533203125	2	553.329476	1104.6444	1.2853	0.00071117	3.9606	0.0021915	5.2459	0.0029027	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.88915	1	10368	10368		35.201	4.883	1	4524400	+		21756	27143	14655	14665	25096	25096					0.09626318847836046
KLFRGLNL	8	Unmodified	_KLFRGLNL_					0	0	0			REV__ENST00000359644.7_1_3:130672752-130673910:+|nuORF	REV__ENST00000359644.7_1_3:130672752-130673910:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.2830810546875	2	480.803094	959.591636	-0.78182	-0.0003759	-3.4903	-0.0016781	-4.2721	-0.002054	480.80126597652145	101.98	1.0136	102.17	101.76	102.77	0.19484					37	24	2	0	0	0	0.4196	1	10790	10790		11.511	0	1	115190	+		21757	25463	14656	14666	25097	25097					0.1102236078503438
KLFRLRAM	8	Unmodified	_KLFRLRAM_					0	0	0			REV__ENSG00000154262|ENST00000284425|ABCA6	REV__ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	517.8186645507812	2	517.818221	1033.62189	-0.046234	-2.3941E-05	1.7495	0.00090591	1.7032	0.00088197	517.8189821353725	93.25	1.5107	93.32	92.756	94.266	0.06987					100	35	4	0	0	0	0.82464	1	9679	9679		21.702	0	1	1007500	+		21758	20377	14657	14667	25098	25098					0.10642396178559466
KLFRLRAM	8	Unmodified	_KLFRLRAM_					0	0	0			REV__ENSG00000154262|ENST00000284425|ABCA6	REV__ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	517.819091796875	2	517.818221	1033.62189	0.9943	0.00051487	0.75355	0.0003902	1.7478	0.00090507	517.81845543952	93.057	1.5114	93.102	92.582	94.093	0.045448					101	35	5	0	0	0	0.86288	1	9777	9777		26.796	7.4361	1	1083300	+		21759	20377	14657	14667	25099	25099					0.10642396178559466
KLFSFWKRKN	10	Unmodified	_KLFSFWKRKN_					0	0	0		ENSG00000106013|ENST00000265224|ANKRD7;nc|ENSG00000106013|Q92527-2|ANKRD7	ENSG00000106013|ENST00000265224|ANKRD7	ENSG00000106013|ENST00000265224|ANKRD7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9325866699219	3	451.931185	1352.77173	-0.1384	-6.2545E-05	3.5032	0.0015832	3.3648	0.0015207	451.93267141602934	99.223	2.3092	99.273	97.79	100.1	0.049828					147	53	3	0	0	0	0.85259	1	10447	10447		20.03	2.5625	1	486010			21760	2273	14658	14668	25100	25100					0.10945039722014371
KLFSFWKRKN	10	Unmodified	_KLFSFWKRKN_					0	0	0		ENSG00000106013|ENST00000265224|ANKRD7;nc|ENSG00000106013|Q92527-2|ANKRD7	ENSG00000106013|ENST00000265224|ANKRD7	ENSG00000106013|ENST00000265224|ANKRD7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9317626953125	3	451.931185	1352.77173	1.2214	0.000552	2.0573	0.00092974	3.2787	0.0014817	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.8583	1	10718	10718		22.562	0	1	1043200			21761	2273	14658	14668	25101	25101					0.10945039722014371
KLFSFWKRKN	10	Unmodified	_KLFSFWKRKN_					0	0	0		ENSG00000106013|ENST00000265224|ANKRD7;nc|ENSG00000106013|Q92527-2|ANKRD7	ENSG00000106013|ENST00000265224|ANKRD7	ENSG00000106013|ENST00000265224|ANKRD7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.9323425292969	3	451.931185	1352.77173	2.1819	0.00098608	1.1603	0.00052436	3.3422	0.0015104	451.9316131706083	100.36	1.9025	100.71	99.62	101.52	0.3459					138	47	4	0	0	0	0.86014	1	12286	12286		23.378	4.1152	1	885260			21762	2273	14658	14668	25102	25102					0.10945039722014371
KLFSIKTEFTA	11	Unmodified	_KLFSIKTEFTA_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|71|2|sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|71|2|sense	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.8646240234375	2	642.863546	1283.71254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.45	1	115.45	114.95	115.95	-0.0021133								0	0	0	0.56276	1	13905	13905		29.17	3.596	1		+		21763	29446	14659	14669	25103	25103					0.0820309891719262
KLFTDNELQ	9	Unmodified	_KLFTDNELQ_					0	0	0			REV__nc|ENSG00000284969|P13987-2|CD59	REV__nc|ENSG00000284969|P13987-2|CD59	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.2884521484375	2	554.287671	1106.56079	-1.3781	-0.00076384	2.5117	0.0013922	1.1337	0.00062837	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.74721	1	2292	2292		37.159	6.6555	1	328550	+		21764	30282	14660	14670	25104	25104					0.011771178894605328
KLFVPRRQG	9	Unmodified	_KLFVPRRQG_					0	0	0			REV__ENST00000437414.1_1_17:58804528-58804777:-|nuORF	REV__ENST00000437414.1_1_17:58804528-58804777:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.8038940429688	2	550.838	1099.66145	-0.61511	-0.00033883	-0.079394	-4.3733E-05	-0.6945	-0.00038256	550.8377027212784	49.742	0.53057	50.194	49.904	50.435	0.45207					16	12	2	0	0	0	0.20789	1	4871	4871		29.15	0	1	345630	+		21765	26705	14661	14671	25105	25105					0.11560239453638133
KLGCANEPLLL	11	Unmodified	_KLGCANEPLLL_					0	0	0			REV__ENST00000395011.5_1_10:72059754-72059991:-|nuORF	REV__ENST00000395011.5_1_10:72059754-72059991:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	586.8056640625	2	585.831191	1169.64783	0.56041	0.00032831	-2.3628	-0.0013842	-1.8024	-0.0010559	585.8297678998698	59.365	1.1249	59.334	58.786	59.911	-0.030888					42	30	2	0	0	0	0.17382	1	5580	5580		21.686	2.5822	1	101090	+		21766	26096	14662	14672	25106	25106					0.06979200839532496
KLGDPHIR	8	Unmodified	_KLGDPHIR_					0	0	0			REV__chr13:48005001-48037606|63|32.71|0.0|21.64|-|0|TE_info:LTR7,LTR7_dup1935,ERV1,LTR,acceptor,-,48004599,48005001|None,SUCLA2|1	REV__chr13:48005001-48037606|63|32.71|0.0|21.64|-|0|TE_info:LTR7,LTR7_dup1935,ERV1,LTR,acceptor,-,48004599,48005001|None,SUCLA2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.27423095703125	2	468.274701	934.534849	0.98407	0.00046081	-0.943	-0.00044159	0.041063	1.9229E-05	468.27415231648797	16.57	0.50453	16.647	16.403	16.907	0.07715					32	18	3	0	0	0	0.89962	1	112	112		38.806	3.1879	1	88321	+		21767	15578	14663	14673	25107	25107					0.06496313228512918
KLGGNATKK	9	Unmodified	_KLGGNATKK_					0	0	0			REV__ENSG00000177311|ENST00000321464|ZBTB38	REV__ENSG00000177311|ENST00000321464|ZBTB38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	458.7821044921875	2	458.782359	915.550165	0.87378	0.00040087	-0.56177	-0.00025773	0.31201	0.00014315	458.7819477458399	20.868	0.76011	20.936	20.643	21.403	0.068251					66	31	3	0	0	0	0.18601	1	513	513		76.774	7.1465	1	281650	+		21768	22194	14664	14674	25108	25108					0.08901180025713984
KLGGNATKK	9	Unmodified	_KLGGNATKK_					0	0	0			REV__ENSG00000177311|ENST00000321464|ZBTB38	REV__ENSG00000177311|ENST00000321464|ZBTB38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.7822570800781	2	458.782359	915.550165	-0.3365	-0.00015438	0.68553	0.00031451	0.34903	0.00016013	458.7825063546578	21.176	0.73717	21.112	20.86	21.597	-0.064743					60	28	3	0	0	0	0.065196	1	595	595		101.6	5.4103	1	345540	+		21769	22194	14664	14674	25109	25109					0.08901180025713984
KLGGNATKK	9	Unmodified	_KLGGNATKK_					0	0	0			REV__ENSG00000177311|ENST00000321464|ZBTB38	REV__ENSG00000177311|ENST00000321464|ZBTB38	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.78204345703125	2	458.782359	915.550165	-1.2533	-0.00057499	0.92739	0.00042547	-0.32591	-0.00014952	458.78277385971126	21.037	1.5776	21.082	20.679	22.257	0.045401					194	76	5	0	0	0	0.044173	1	548	548		110.12	7.3465	1	7296300	+		21770	22194	14664	14674	25110	25110					0.08901180025713984
KLGGNATKK	9	Unmodified	_KLGGNATKK_					0	0	0			REV__ENSG00000177311|ENST00000321464|ZBTB38	REV__ENSG00000177311|ENST00000321464|ZBTB38	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.78204345703125	2	458.782359	915.550165	0.6342	0.00029096	-0.9481	-0.00043497	-0.3139	-0.00014401	458.78191502738554	20.969	1.8224	20.953	20.579	22.401	-0.016428					186	90	4	0	0	0	0.01944	1	535	535		125.81	5.193	1	7964600	+		21771	22194	14664	14674	25111	25111					0.08901180025713984
KLGGNATKK	9	Unmodified	_KLGGNATKK_					0	0	0			REV__ENSG00000177311|ENST00000321464|ZBTB38	REV__ENSG00000177311|ENST00000321464|ZBTB38	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	458.782359	915.550165	-2.1339	-0.00097899	2.4171	0.0011089	0.28318	0.00012992	458.7832889144435	20.962	0.59357	20.962	20.736	21.33	0	-0.021294	0.0021138	NaN	125.81	58	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	231960	+		21772	22194	14664	14674							0.08901180025713984
KLGGNATKK	9	Unmodified	_KLGGNATKK_					0	0	0			REV__ENSG00000177311|ENST00000321464|ZBTB38	REV__ENSG00000177311|ENST00000321464|ZBTB38	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	458.782359	915.550165	0.87378	0.00040087	-0.56177	-0.00025773	0.31201	0.00014315	458.7819477458399	20.868	0.76011	20.936	20.643	21.403	0.068251	-0.046788	-0.0006195	NaN	125.81	66	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	281650	+		21773	22194	14664	14674							0.08901180025713984
KLGGNATKK	9	Unmodified	_KLGGNATKK_					0	0	0			REV__ENSG00000177311|ENST00000321464|ZBTB38	REV__ENSG00000177311|ENST00000321464|ZBTB38	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	458.782359	915.550165	-1.2533	-0.00057499	0.92739	0.00042547	-0.32591	-0.00014952	458.78277385971126	21.037	1.5776	21.082	20.679	22.257	0.045401	0.099134	0.0007469	NaN	125.81	194	76	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7296300	+		21774	22194	14664	14674							0.08901180025713984
KLGIKLAPPLL	11	Unmodified	_KLGIKLAPPLL_					0	0	0			REV__ENST00000269919.10_1_19:18475054-18475243:+|nuORF	REV__ENST00000269919.10_1_19:18475054-18475243:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	581.900146484375	2	581.899734	1161.78492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.151	1	63.151	62.651	63.651	0								0	0	0	0.56276	1	5530	5530		19.997	2.6318	1		+		21775	24528	14665	14675	25112	25112					0.21049477781411952
KLGISRLAPL	10	Unmodified	_KLGISRLAPL_					0	0	0			REV__ENST00000483821.1_1_6:33162461-33163032:-|nuORF	REV__ENST00000483821.1_1_6:33162461-33163032:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.3495483398438	2	534.350409	1066.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.607	1	66.607	66.107	67.107	0								0	0	0	0.45132	1	5872	5872		23.523	0	1		+		21776	19779	14666	14676	25113	25113					0.1555887453635023
KLGLGASKT	9	Unmodified	_KLGLGASKT_					0	0	0			REV__ENSG00000111266|ENST00000298573|DUSP16	REV__ENSG00000111266|ENST00000298573|DUSP16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.77142333984375	2	437.77146	873.528367	0.18916	8.281E-05	-0.44353	-0.00019417	-0.25437	-0.00011136	437.77124644611854	39.786	1.476	39.875	39.186	40.662	0.088375					62	41	2	0	0	0	0.7932	1	2465	2465		14.137	1.9303	1	3151300	+		21777	17857	14667	14677	25114	25114					0.08654375277126292
KLGLGKKFTEF	11	Unmodified	_KLGLGKKFTEF_					0	0	0			REV__ENST00000559562.1_1_15:45362663-45365725:+|nuORF	REV__ENST00000559562.1_1_15:45362663-45365725:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8818359375	2	634.374081	1266.73361	6.8434	0.0043413	-1.8757	-0.0011899	4.9677	0.0031514	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.75495	1	13731	13731		20.947	5.3051	1	75725	+		21778	19601	14668	14678	25115	25115					0.11091109016706469
KLGPVVYV	8	Unmodified	_KLGPVVYV_					0	0	0		ENSG00000198060|ENST00000358935|MARCHF5	ENSG00000198060|ENST00000358935|MARCHF5	ENSG00000198060|ENST00000358935|MARCHF5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7710876464844	2	437.773471	873.53239	-1.5883	-0.00069529	-3.2181	-0.0014088	-4.8063	-0.0021041	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.87276	1	2245	2245		29.842	4.3914	1	1227500			21779	8232	14669	14679	25116	25116					0.09056464770844741
KLGPVVYV	8	Unmodified	_KLGPVVYV_					0	0	0		ENSG00000198060|ENST00000358935|MARCHF5	ENSG00000198060|ENST00000358935|MARCHF5	ENSG00000198060|ENST00000358935|MARCHF5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77117919921875	2	437.773471	873.53239	-2.0028	-0.00087676	-4.2532	-0.0018619	-6.256	-0.0027387	437.7717477191302	40.214	2.554	40.591	39.609	42.163	0.3765					138	67	4	0	0	0	0.82464	3	3368	3309;3368;3463		37.028	13.992	1	10119000			21780	8232	14669	14679	25117;25118;25119	25118					0.09056464770844741
KLGRGKRPPLI	11	Unmodified	_KLGRGKRPPLI_					0	0	0			REV__nc|ENSG00000100207|Q9UGU0-2|TCF20	REV__nc|ENSG00000100207|Q9UGU0-2|TCF20	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7666320800781	3	412.275063	1233.80336	-1.903	-0.00078457	-2.3204	-0.00095665	-4.2235	-0.0017412	412.27411326899727	39.662	0.61232	39.668	39.378	39.99	0.0065041					27	15	2	0	0	0	0.17729	1	2479	2479		5.4129	0	1	69104	+		21781	17152	14670	14680	25120	25120					0.19581032476003202
KLGRHASIT	9	Unmodified	_KLGRHASIT_					0	0	0			REV__chr16:84296160-84312961|19|11.79|0.02|9.41|+|0|None,WFDC1|1	REV__chr16:84296160-84312961|19|11.79|0.02|9.41|+|0|None,WFDC1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7972412109375	2	491.793258	981.571963	0.13478	6.6286E-05	4.4765	0.0022015	4.6113	0.0022678	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.7932	1	5652	5652		26.693	3.6504	1	176030	+		21782	15645	14671	14681	25121	25121					0.08043984774269575
KLGRHASIT	9	Unmodified	_KLGRHASIT_					0	0	0			REV__chr16:84296160-84312961|19|11.79|0.02|9.41|+|0|None,WFDC1|1	REV__chr16:84296160-84312961|19|11.79|0.02|9.41|+|0|None,WFDC1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957763671875	2	491.793258	981.571963	0.2769	0.00013618	3.964	0.0019495	4.2409	0.0020856	491.79514627400846	43.393	1.1043	43.45	42.905	44.01	0.056744					45	26	2	0	0	0	0.78983	1	2959	2959		27.882	4.8398	1	192480	+		21783	15645	14671	14681	25122	25122					0.08043984774269575
KLGRKAFI	8	Unmodified	_KLGRKAFI_					0	0	0		ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.8064270019531	2	466.805637	931.596721	-1.9392	-0.00090521	3.4764	0.0016228	1.5372	0.00071757	466.8071062107657	31.294	1.1887	31.294	30.953	32.141	0					86	41	3	0	0	0	0.81724	1	1487	1487		14.664	0	1	152630			21784	3978	14672	14682	25123	25123					0.12818664647659261
KLGRQGTNKAK	11	Unmodified	_KLGRQGTNKAK_					0	0	0			REV__ENSG00000166012|ENST00000448108|TAF1D	REV__ENSG00000166012|ENST00000448108|TAF1D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.25579833984375	3	400.910561	1199.70985	0.00020052	8.0391E-08	3.4699	0.0013911	3.4701	0.0013912	400.91234042974787	18.8	0.26195	18.17	18.018	18.28	-0.6296					8	5	2	0	0	0	0.1747	1	424	424		27.644	2.5179	1	29217	+		21785	21242	14673	14683	25124	25124					0.1179868830288342
KLGRRDLF	8	Unmodified	_KLGRRDLF_					0	0	0		ENST00000451739.6_2_11:20388750-20398162:+|nuORF	ENST00000451739.6_2_11:20388750-20398162:+|nuORF	ENST00000451739.6_2_11:20388750-20398162:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.2637023925781	2	502.803626	1003.5927	1.2809	0.00064403	-3.1977	-0.0016078	-1.9168	-0.00096377	502.8018803553314	32.88	0.378	33.092	32.893	33.271	0.21168					14	8	2	0	0	0	0.4196	1	2343	2343		71.296	5.4925	1	64681			21786	11904	14674	14684	25125	25125					0.09104575153946826
KLGRRDLF	8	Unmodified	_KLGRRDLF_					0	0	0		ENST00000451739.6_2_11:20388750-20398162:+|nuORF	ENST00000451739.6_2_11:20388750-20398162:+|nuORF	ENST00000451739.6_2_11:20388750-20398162:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	502.803626	1003.5927	-0.17588	-8.8434E-05	-2.2138	-0.0011131	-2.3897	-0.0012015	502.80252133182967	32.926	0.42266	33.095	32.849	33.271	0.16971	0.001899	0.00053881	NaN	71.296	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149890			21787	11904	14674	14684							0.09104575153946826
KLGTALSSV	9	Unmodified	_KLGTALSSV_					0	0	0			REV__nc|ENSG00000095485|Q69YN2-3|CWF19L1	REV__nc|ENSG00000095485|Q69YN2-3|CWF19L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26318359375	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.7932	1	3411	3411		21.96	1.4781	1	5350400	+		21788	17059	14675	14685	25126	25126					0.07010669040244011
KLGVSRNIPVL	11	Unmodified	_KLGVSRNIPVL_					0	0	0			REV__ENST00000515521.5_1_4:3422373-3428454:+|nuORF	REV__ENST00000515521.5_1_4:3422373-3428454:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.880859375	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.73893	1	2644	2644		24.519	4.5224	1	352020	+		21789	20683	14676	14686	25127	25127					0.15525931110823876
KLGVVPVY	8	Unmodified	_KLGVVPVY_					0	0	0		nc|ENSG00000172728|Q6P4F1-3|FUT10;nc|ENSG00000172728|Q6P4F1-4|FUT10;nc|ENSG00000172728|Q6P4F1-5|FUT10;ENST00000520767.5_1_8:33246435-33318970:-|nuORF;nc|ENSG00000172728|Q6P4F1-6|FUT10;ENSG00000172728|ENST00000327671|FUT10;nc|ENSG00000172728|Q6P4F1-2|FUT10	nc|ENSG00000172728|Q6P4F1-3|FUT10	nc|ENSG00000172728|Q6P4F1-3|FUT10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.771240234375	2	437.773471	873.53239	-1.5883	-0.00069529	-3.2181	-0.0014088	-4.8063	-0.0021041	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.86791	2	2211	2211;2349		28.254	0	1	1227500			21790	6787	14677	14687	25128;25129	25128					0.09056464770844741
KLGVVPVY	8	Unmodified	_KLGVVPVY_					0	0	0		nc|ENSG00000172728|Q6P4F1-3|FUT10;nc|ENSG00000172728|Q6P4F1-4|FUT10;nc|ENSG00000172728|Q6P4F1-5|FUT10;ENST00000520767.5_1_8:33246435-33318970:-|nuORF;nc|ENSG00000172728|Q6P4F1-6|FUT10;ENSG00000172728|ENST00000327671|FUT10;nc|ENSG00000172728|Q6P4F1-2|FUT10	nc|ENSG00000172728|Q6P4F1-3|FUT10	nc|ENSG00000172728|Q6P4F1-3|FUT10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77105712890625	2	437.773471	873.53239	-2.0028	-0.00087676	-4.2532	-0.0018619	-6.256	-0.0027387	437.7717477191302	40.214	2.554	40.591	39.609	42.163	0.3765					138	67	4	0	0	0	0.89457	1	3345	3345		37.028	1.8278	1	10119000			21791	6787	14677	14687	25130	25130					0.09056464770844741
KLHFVWRPIK	10	Unmodified	_KLHFVWRPIK_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9399719238281	3	441.939792	1322.79755	0.34626	0.00015303	-0.41082	-0.00018156	-0.064558	-2.8531E-05	441.9394808074078	56.501	1.1083	56.601	56.467	57.576	0.099186					113	51	3	0	0	0	0.85086	2	4788	4788;4796		26.063	10.143	1	679940	+		21792	23202	14678	14688	25131;25132	25131					0.14905933964291762
KLHGKILVI	9	Unmodified	_KLHGKILVI_					0	0	0		ENST00000474499.1_1_X:106310040-106310900:-|nuORF;nc|ENSG00000089682|Q96IZ5-2|RBM41;nc|ENSG00000089682|Q96IZ5|RBM41;ENSG00000089682|ENST00000685964|RBM41	ENST00000474499.1_1_X:106310040-106310900:-|nuORF	ENST00000474499.1_1_X:106310040-106310900:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.8506164550781	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.91	1	112.98	112.48	113.48	0.066025								0	0	0	0.36148	1	12137	12137		4.3163	0.33103	1				21793	1628	14679	14689	25133	25133					0.17648079887305812
KLHHLPVAP	9	Unmodified	_KLHHLPVAP_					0	0	0			REV__ENST00000349457.7_1_16:57608924-57609494:+|nuORF	REV__ENST00000349457.7_1_16:57608924-57609494:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	507.28875732421875	2	506.308544	1010.60253	0.13031	6.5978E-05	0.93041	0.00047107	1.0607	0.00053705	506.3090702078247	39.447	1.2074	39.394	38.87	40.077	-0.052731					48	32	2	0	0	0	0.20789	1	2472	2472		8.2313	0	1	139930	+		21794	25333	14680	14690	25134	25134					0.09765763159327889
KLHHPELLI	9	Unmodified	_KLHHPELLI_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.337646484375	2	550.334759	1098.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.69	1	117.6	117.1	118.1	-0.088509								0	0	0	0.3307	1	12671	12671		19.997	0	1		+		21795	19832	14681	14691	25135	25135					0.10958301502273571
KLHINSLTLMI	11	Unmodified	_KLHINSLTLMI_					0	0	0			REV__ENSG00000205328|ENST00000379665|OR6C65	REV__ENSG00000205328|ENST00000379665|OR6C65	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8822631835938	2	641.881216	1281.74788	-0.050098	-3.2157E-05	2.0215	0.0012976	1.9714	0.0012654	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.64498	1	10264	10264		39.253	4.1008	1	3644700	+		21796	23551	14682	14692	25136	25136					0.11827438173349947
KLHKAILSWR	10	Unmodified	_KLHKAILSWR_					0	0	0			REV__ENSG00000185697|ENST00000522677|MYBL1	REV__ENSG00000185697|ENST00000522677|MYBL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.38330078125	2	626.387857	1250.76116	-0.232	-0.00014532	-1.4662	-0.0009184	-1.6982	-0.0010637	626.386744363711	117.28	0.25537	117.2	117	117.26	-0.07531					15	8	2	0	0	0	0.37624	1	12584	12584		24.519	4.5224	1	663780	+		21797	22785	14683	14693	25137	25137					0.1458105706758488
KLHKAILSWR	10	Unmodified	_KLHKAILSWR_					0	0	0			REV__ENSG00000185697|ENST00000522677|MYBL1	REV__ENSG00000185697|ENST00000522677|MYBL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3910522460938	2	626.387857	1250.76116	0.92654	0.00058037	-3.4743	-0.0021762	-2.5477	-0.0015959	626.3854005656832	109.98	1.1023	110.05	109.78	110.88	0.073685					78	37	4	0	0	0	0.8608	1	11840	11840		34.173	8.5985	1	2583100	+		21798	22785	14683	14693	25138	25138					0.1458105706758488
KLHKGTMS	8	Unmodified	_KLHKGTMS_					0	0	0		ENST00000511653.1_2_4:83978450-83978495:+|nuORF	ENST00000511653.1_2_4:83978450-83978495:+|nuORF	ENST00000511653.1_2_4:83978450-83978495:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.24847412109375	2	451.249837	900.485122	-0.24052	-0.00010853	-1.8762	-0.00084665	-2.1168	-0.00095518	451.24888516204976	65.538	1.2999	65.566	64.989	66.289	0.027321					98	67	2	0	0	0	0.8347	1	6193	6193		23.042	0.0057756	1	846940			21799	13023	14684	14694	25139	25139					0.03089862228216589
KLHKILETRLD	11	Unmodified	_KLHKILETRLD_					0	0	0		ENSG00000133103|ENST00000455146|COG6;nc|ENSG00000133103|Q9Y2V7-4|COG6;nc|ENSG00000133103|Q9Y2V7-2|COG6	ENSG00000133103|ENST00000455146|COG6	ENSG00000133103|ENST00000455146|COG6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30133056640625	3	455.945271	1364.81398	0.96379	0.00043944	-3.8381	-0.0017499	-2.8743	-0.0013105	456.27900240775955	33.461	0.2122	33.672	33.524	33.736	0.21168					6	4	2	0	0	0	0.17648	1	2411	2411		7.6794	0	1	18849			21800	3854	14685	14695	25140	25140					0.14616970339739055
KLHNKRND	8	Unmodified	_KLHNKRND_					0	0	0			REV__ENST00000447985.1_1_21:30260216-30260456:-|nuORF	REV__ENST00000447985.1_1_21:30260216-30260456:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7863159179688	2	512.785964	1023.55738	-0.41518	-0.0002129	2.6789	0.0013737	2.2637	0.0011608	512.7871529206141	28.203	0.66766	28.106	27.707	28.375	-0.096947					39	15	3	0	0	0	0.90983	1	1684	1684		42.396	1.618	1	213290	+		21801	26831	14686	14696	25141	25141					0.04653912626122292
KLHPLHIFIV	10	Unmodified	_KLHPLHIFIV_					0	0	0			REV__ENST00000560301.5_1_15:41067690-41071423:-|nuORF	REV__ENST00000560301.5_1_15:41067690-41071423:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2557678222656	3	406.257009	1215.7492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.302	1	65.428	64.928	65.928	0.12532								0	0	0	0.45132	1	5801	5801		16.007	3.5739	1		+		21802	28756	14687	14697	25142	25142					0.1499544032437825
KLHRLNEP	8	Unmodified	_KLHRLNEP_					0	0	0			REV__nc|ENSG00000019582|P04233-5|CD74	REV__nc|ENSG00000019582|P04233-5|CD74	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.8055419921875	2	503.793258	1005.57196	1.0599	0.00053395	-0.47356	-0.00023858	0.5863	0.00029537	504.2954268495149	31.953	0.38682	32.06	31.845	32.232	0.10707					11	8	2	0	0	0	0.4196	1	2233	2233		23.042	0	1	45737	+		21803	16230	14688	14698	25143	25143					0.06939984774271579
KLHSRYTP	8	Unmodified	_KLHSRYTP_					0	0	0			REV__ENST00000478198.1_1_7:756348-756453:-|nuORF	REV__ENST00000478198.1_1_7:756348-756453:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.25714111328125	2	501.279983	1000.54541	-0.028119	-1.4095E-05	-1.6543	-0.00082928	-1.6824	-0.00084337	501.2791264160294	54.625	0.50488	55.032	54.781	55.286	0.40663					28	11	4	0	0	0	0.4196	1	5538	5538		32.812	4.9302	1	350840	+		21804	27374	14689	14699	25144	25144					0.04516295882945087
KLHVLTQVIAH	11	Unmodified	_KLHVLTQVIAH_					0	0	0			REV__ENSG00000263761|ENST00000581492|GDF2	REV__ENSG00000263761|ENST00000581492|GDF2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2633361816406	3	420.25919	1257.75574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.242	1	30.354	29.854	30.854	0.11225								0	0	0	0.56276	1	1333	1333		35.178	7.0967	1		+		21805	23954	14690	14700	25145	25145					0.13717333485124072
KLHVVLIKPLS	11	Unmodified	_KLHVVLIKPLS_					0	0	0			REV__nc|ENSG00000114316|Q13107-2|USP4	REV__nc|ENSG00000114316|Q13107-2|USP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.9183959960938	2	623.915916	1245.81728	2.3391	0.0014594	-1.197	-0.0007468	1.1422	0.00071262	623.9150348689084	109.89	1.4015	109.95	109.45	110.85	0.067932					103	58	2	0	0	0	0.79294	1	13372	13372		12.812	1.9462	1	709500	+		21806	18038	14691	14701	25146	25146					0.2042026518442981
KLHWDPGH	8	Unmodified	_KLHWDPGH_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.8352966308594	2	495.251226	988.487899	0.95249	0.00047172	-2.3642	-0.0011709	-1.4117	-0.00069915	495.24966926381904	34.206	0.49358	34.511	34.282	34.776	0.30495					23	11	3	0	0	0	0.4196	1	2531	2531		25.45	0	1	424610	+		21807	18623	14692	14702	25147	25147					-0.00680546322621467
KLHYPKIP	8	Unmodified	_KLHYPKIP_					0	0	0			REV__ENSG00000174501|ENST00000295246|ANKRD36C	REV__ENSG00000174501|ENST00000295246|ANKRD36C	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.30682373046875	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.831	1	52.872	52.372	53.372	0.040592								0	0	0	0.29755	1	4285	4285		24.203	4.8428	1		+		21808	21999	14693	14703	25148	25148					0.0988724492780193
KLICTLITN	9	Unmodified	_KLICTLITN_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|43|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|43|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|43|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.80364990234375	2	509.801903	1017.58925	0.31699	0.0001616	3.2339	0.0016486	3.5509	0.0018103	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.76764	1	10059	10059		34.173	2.6427	1	2635100			21809	14513	14694	14704	25149	25149					0.08116144265056846
KLIDMDGNQQL	11	Unmodified	_KLIDMDGNQQL_					0	0	0			REV__ENSG00000152208|ENST00000282020|GRID2	REV__ENSG00000152208|ENST00000282020|GRID2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	637.8221435546875	2	637.824095	1273.63364	0.34788	0.00022189	-2.3145	-0.0014762	-1.9666	-0.0012544	637.8222658380796	53.704	0.5425	54.118	53.868	54.41	0.4139					26	12	3	0	0	0	0.67041	1	5443	5443		36.318	0.69936	1	521250	+		21810	20289	14695	14705	25150	25150					0.007765036205910292
KLIDMDGNQQL	11	Unmodified	_KLIDMDGNQQL_					0	0	0			REV__ENSG00000152208|ENST00000282020|GRID2	REV__ENSG00000152208|ENST00000282020|GRID2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	637.824095	1273.63364	0.34788	0.00022189	-2.3145	-0.0014762	-1.9666	-0.0012544	637.8222658380796	53.704	0.5425	54.118	53.868	54.41	0.4139	-0.0077746	6.4406E-06	NaN	36.318	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	521250	+		21811	20289	14695	14705							0.007765036205910292
KLIDMDGNQQL	11	Unmodified	_KLIDMDGNQQL_					0	0	0			REV__ENSG00000152208|ENST00000282020|GRID2	REV__ENSG00000152208|ENST00000282020|GRID2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	637.824095	1273.63364	0.99713	0.00063599	-2.3245	-0.0014826	-1.3274	-0.00084662	638.3243682896746	53.523	0.66838	54.133	53.733	54.402	0.61073	0.0077746	-6.2905E-06	NaN	36.318	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	602430	+		21812	20289	14695	14705							0.007765036205910292
KLIESHIR	8	Unmodified	_KLIESHIR_					0	0	0			REV__ENSG00000068976|ENST00000164139|PYGM	REV__ENSG00000068976|ENST00000164139|PYGM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.30291748046875	2	498.303458	994.592364	0.46261	0.00023052	-0.96491	-0.00048082	-0.50229	-0.00025029	498.3028155429852	31.945	0.72806	32.052	31.675	32.403	0.10707					35	16	3	0	0	0	0.87064	1	2230	2230		29.15	1.0681	1	354970	+		21813	16572	14696	14706	25151	25151					0.0948515543409485
KLIFAKIQD	9	Unmodified	_KLIFAKIQD_					0	0	0		nc|ENSG00000197142|Q9ULC5-4|ACSL5;ENSG00000197142|ENST00000354655|ACSL5;nc|ENSG00000197142|Q9ULC5-3|ACSL5	nc|ENSG00000197142|Q9ULC5-4|ACSL5	nc|ENSG00000197142|Q9ULC5-4|ACSL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3265991210938	2	538.329142	1074.64373	-0.15636	-8.4174E-05	-4.0212	-0.0021647	-4.1776	-0.0022489	538.3269075153179	101.16	2.8222	101.19	100.44	103.26	0.031036					310	67	7	0	0	0	0.76764	1	10898	10898		34.173	2.6427	1	74691000			21814	8140	14697	14707	25152	25152					0.10939479408125408
KLIFARLLQEV	11	Unmodified	_KLIFARLLQEV_					0	0	0			REV__ENSG00000116670|ENST00000376692|MAD2L2	REV__ENSG00000116670|ENST00000376692|MAD2L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	443.9483337402344	3	443.946612	1328.81801	0.74556	0.00033099	3.6198	0.001607	4.3654	0.001938	443.9481188888374	107.16	1.4993	107.25	106.38	107.88	0.091263					116	35	4	0	0	0	0.69071	1	11527	11527		33.039	5.3955	1	2920200	+		21815	18209	14698	14708	25153	25153					0.16675059833460182
KLIGEYGLRNK	11	Unmodified	_KLIGEYGLRNK_					0	0	0		ENST00000460761.1_1_19:54705052-54705521:+|nuORF;ENSG00000170889|ENST00000302907|RPS9	ENST00000460761.1_1_19:54705052-54705521:+|nuORF	ENST00000460761.1_1_19:54705052-54705521:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.9219970703125	3	430.922467	1289.74557	0.59097	0.00025466	-1.7627	-0.00075958	-1.1717	-0.00050492	430.92109895775195	33.593	0.83337	33.763	33.526	34.36	0.16971					48	19	4	0	0	0	0.093139	1	2431	2431		94.409	23.593	1	1290900			21816	6622	14699	14709	25154	25154					0.11228725759883673
KLIGGNRKL	9	Unmodified	_KLIGGNRKL_					0	0	0		ENSG00000178031|ENST00000380548|ADAMTSL1;ENST00000380559.7_1_9:18706652-18908543:+|nuORF	ENSG00000178031|ENST00000380548|ADAMTSL1	ENSG00000178031|ENST00000380548|ADAMTSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	499.8250427246094	2	499.827101	997.639649	-0.56686	-0.00028333	0.5112	0.00025551	-0.055662	-2.7821E-05	499.8272182273713	19.855	0.40326	19.785	19.657	20.06	-0.070013					33	17	3	0	0	0	0.77546	1	459	459		31.955	1.4512	1	72411			21817	7177	14700	14710	25155	25155					0.1407343470507385
KLIIGSIKLLK	11	Unmodified	_KLIIGSIKLLK_					0	0	0			REV__ENSG00000144554|ENST00000675286|FANCD2	REV__ENSG00000144554|ENST00000675286|FANCD2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	409.2918701171875	3	409.29172	1224.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.817	1	71.854	71.354	72.354	0.037148								0	0	0	0.56276	1	6815	6815		5.6988	3.8119	1		+		21818	19898	14701	14711	25156	25156					0.2498972236123791
KLIIGSIKLLK	11	Unmodified	_KLIIGSIKLLK_					0	0	0			REV__ENSG00000144554|ENST00000675286|FANCD2	REV__ENSG00000144554|ENST00000675286|FANCD2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.29205322265625	3	409.29172	1224.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.256	1	18.786	18.286	19.286	-0.46967								0	0	0	0.56276	1	493	493		8.7993	1.3996	1		+		21819	19898	14701	14711	25157	25157					0.2498972236123791
KLIKDVTEM	9	Unmodified	_KLIKDVTEM_					0	0	0		ENSG00000091136|ENST00000222399|LAMB1	ENSG00000091136|ENST00000222399|LAMB1	ENSG00000091136|ENST00000222399|LAMB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.8067626953125	2	538.804642	1075.59473	0.74987	0.00040403	3.065	0.0016514	3.8148	0.0020555	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.76764	1	9058	9058		34.173	7.4796	1	840570			21820	1668	14702	14712	25158	25158					0.0599582305687818
KLIKTSKVKL	10	Unmodified	_KLIKTSKVKL_					0	0	0		ENST00000461562.1_1_10:96121274-96122595:-|nuORF;ENST00000463649.5_1_10:96117838-96122595:-|nuORF;ENSG00000173145|ENST00000371361|NOC3L	ENST00000461562.1_1_10:96121274-96122595:-|nuORF	ENST00000461562.1_1_10:96121274-96122595:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	579.7955932617188	2	579.402641	1156.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.026	1	75.026	74.526	75.526	0								0	0	0	0.45132	1	6783	6783		19.997	1.6724	1				21821	6832	14703	14713	25159	25159					0.21860576293079248
KLILIKFC	8	Unmodified	_KLILIKFC_					0	0	0		nc|ENSG00000115607|O95256-2|IL18RAP;ENSG00000115607|ENST00000687160|IL18RAP	nc|ENSG00000115607|O95256-2|IL18RAP	nc|ENSG00000115607|O95256-2|IL18RAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.31353759765625	2	489.314449	976.614345	-0.082483	-4.036E-05	-0.76246	-0.00037308	-0.84494	-0.00041344	489.3139692244395	95.381	1.9451	95.447	95.009	96.954	0.06591					116	45	4	0	0	0	0.81548	1	9979	9979		20.482	2.1574	1	1176800			21822	2862	14704	14714	25160	25160					0.1251024385828714
KLILRLHKL	9	Unmodified	_KLILRLHKL_					0	0	0		nc|ENSG00000085511|Q9Y6R4-2|MAP3K4;ENSG00000085511|ENST00000392142|MAP3K4	nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.397693	1132.78083	0.4844	0.00027485	-3.3425	-0.0018965	-2.8581	-0.0016217	567.8956268030555	92.033	0.25455	92.255	92.107	92.362	0.22157					6	5	2	0	0	0	0.20789	1	9280	9280		7.1934	0	1	38293			21823	1532	14705	14715	25161	25161					0.21975433078341666
KLILVAGLGVP	11	Unmodified	_KLILVAGLGVP_					0	0	0			REV__ENST00000579695.5_1_17:38077365-38077797:-|nuORF	REV__ENST00000579695.5_1_17:38077365-38077797:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.36181640625	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.019	1	44.988	44.488	45.488	-0.031067								0	0	0	0.56276	1	3620	3620		20.947	4.4738	1		+		21824	29033	14706	14716	25162	25162					0.17520929338934366
KLIMKKHE	8	Unmodified	_KLIMKKHE_					0	0	0			REV__ENST00000457997.1_1_13:19435671-19446003:-|nuORF	REV__ENST00000457997.1_1_13:19435671-19446003:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8085327148438	2	513.810062	1025.60557	-1.4445	-0.00074222	-0.71223	-0.00036595	-2.1568	-0.0011082	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.8347	1	3816	3816		23.042	3.0457	1	1675700	+		21825	26624	14707	14717	25163	25163					0.09379270221802471
KLIMKKHE	8	Unmodified	_KLIMKKHE_					0	0	0			REV__ENST00000457997.1_1_13:19435671-19446003:-|nuORF	REV__ENST00000457997.1_1_13:19435671-19446003:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.8079833984375	2	513.810062	1025.60557	-0.47838	-0.0002458	-1.5619	-0.00080254	-2.0403	-0.0010483	513.8090681534527	46.11	2.0095	46.581	45.725	47.735	0.47139					108	48	3	0	0	0	0.89043	3	4381	4358;4381;4422		38.806	5.1146	1	5264100	+		21826	26624	14707	14717	25164;25165;25166	25165					0.09379270221802471
KLIMKKHE	8	Unmodified	_KLIMKKHE_					0	0	0			REV__ENST00000457997.1_1_13:19435671-19446003:-|nuORF	REV__ENST00000457997.1_1_13:19435671-19446003:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8096923828125	2	513.810062	1025.60557	-0.57846	-0.00029722	-1.0066	-0.00051719	-1.585	-0.00081441	513.8095113148362	46.467	0.72382	47.39	47.191	47.915	0.92315					30	16	2	0	0	0	0.89962	1	4376	4376		38.806	4.6336	1	5287500	+		21827	26624	14707	14717	25167	25167					0.09379270221802471
KLINNLFYRKR	11	Unmodified	_KLINNLFYRKR_					0	0	0			REV__ENST00000495198.6_1_5:64023893-64064425:-|nuORF	REV__ENST00000495198.6_1_5:64023893-64064425:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.3124084472656	3	488.964777	1463.8725	-0.80812	-0.00039514	-3.9497	-0.0019313	-4.7578	-0.0023264	488.96285630490337	16.481	0.68427	16.528	16.402	17.086	0.047804					81	29	4	0	0	0	0.18034	1	172	172		21.78	8.8229	1	1279200	+		21828	27733	14708	14718	25168	25168					0.15912071704838127
KLIPRLET	8	Unmodified	_KLIPRLET_					0	0	0			REV__ENST00000480809.5_1_3:185925300-186038248:-|nuORF	REV__ENST00000480809.5_1_3:185925300-186038248:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.3069152832031	2	485.30821	968.601866	0.80015	0.00038832	-0.8253	-0.00040053	-0.02515	-1.2206E-05	485.3075158248656	33.415	0.87708	33.627	33.271	34.148	0.21168					37	20	3	0	0	0	0.92457	1	2423	2423		47.916	1.9636	1	449810	+		21829	16442	14709	14719	25169	25169					0.11630923719621933
KLIQKKLL	8	Unmodified	_KLIQKKLL_					0	0	0		ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.3529968261719	2	492.35242	982.690287	-0.31419	-0.00015469	2.2753	0.0011202	1.9611	0.00096554	492.3534016645383	65.553	0.57588	65.939	65.817	66.393	0.38615					27	15	2	0	0	0	0.84341	1	7131	7131		24.203	0	1	467230			21830	5588	14710	14720	25170	25170					0.19824964030078718
KLITDKVFTAI	11	Unmodified	_KLITDKVFTAI_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	624.3757934570312	2	624.881739	1247.74892	1.3499	0.00084354	-3.201	-0.0020002	-1.8511	-0.0011567	624.8799358367615	103.6	0.69087	103.78	103.54	104.24	0.18298					34	16	3	0	0	0	0.17472	1	10948	10948		24.519	12.313	1	132750	+		21831	20437	14711	14721	25171	25171					0.13495975813930272
KLITDKVFTAI	11	Unmodified	_KLITDKVFTAI_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	624.881739	1247.74892	-0.06105	-3.8149E-05	-2.5631	-0.0016016	-2.6241	-0.0016398	624.8801985581207	104.05	0.7849	104.05	103.8	104.58	0	0.18457	0.0013436	NaN	24.519	33	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81228	+		21832	20437	14711	14721							0.13495975813930272
KLITDKVFTAI	11	Unmodified	_KLITDKVFTAI_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	624.881739	1247.74892	-0.24739	-0.00015459	-2.4711	-0.0015441	-2.7185	-0.0016987	624.8803649163186	103.92	0.92024	103.91	103.59	104.51	-0.0035706	0.045408	0.0014586	NaN	24.519	46	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107900	+		21833	20437	14711	14721							0.13495975813930272
KLITDKVFTAI	11	Unmodified	_KLITDKVFTAI_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	624.881739	1247.74892	2.9306	0.0018313	-6.3275	-0.003954	-3.3969	-0.0021227	624.8778145430389	103.91	0.80221	103.87	103.6	104.4	-0.043755	-0.0013511	-0.0033611	NaN	24.519	39	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	160290	+		21834	20437	14711	14721							0.13495975813930272
KLITDKVFTAI	11	Unmodified	_KLITDKVFTAI_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	624.881739	1247.74892	0.85776	0.000536	-3.385	-0.0021152	-2.5273	-0.0015792	624.8797344825811	103.71	0.94684	103.75	103.4	104.34	0.041481	-0.11572	0.00031638	NaN	24.519	38	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	145090	+		21835	20437	14711	14721							0.13495975813930272
KLITDKVFTAI	11	Unmodified	_KLITDKVFTAI_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	624.881739	1247.74892	0.9243	0.00057758	-2.5937	-0.0016208	-1.6694	-0.0010432	624.8805010840834	103.68	0.69363	103.8	103.55	104.24	0.11774	-0.072903	0.0013053	NaN	24.519	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200030	+		21836	20437	14711	14721							0.13495975813930272
KLITDKVFTAI	11	Unmodified	_KLITDKVFTAI_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	624.881739	1247.74892	-1.2084	-0.00075513	-1.6894	-0.0010557	-2.8978	-0.0018108	624.8808160383492	103.8	0.60696	103.92	103.69	104.3	0.11494	0.046121	0.0024355	NaN	24.519	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139100	+		21837	20437	14711	14721							0.13495975813930272
KLITSPKKS	9	Unmodified	_KLITSPKKS_					0	0	0			REV__ENST00000437629.6_2_10:88854131-88854368:+|nuORF	REV__ENST00000437629.6_2_10:88854131-88854368:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.9683532714844	2	501.321317	1000.62808	0.16822	8.4332E-05	-0.1988	-9.9662E-05	-0.030579	-1.533E-05	501.32102244591835	33.859	0.57998	34.029	33.78	34.36	0.16971					30	13	3	0	0	0	0.20789	1	2468	2468		35.152	10.949	1	617870	+		21838	26712	14712	14722	25172	25172					0.12779192891082403
KLIVFFLIWLI	11	Unmodified	_KLIVFFLIWLI_					0	0	0			REV__ENST00000411426.1_2_11:58893617-58893683:+|nuORF	REV__ENST00000411426.1_2_11:58893617-58893683:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.9705810546875	3	468.972099	1403.89447	-0.32674	-0.00015323	-1.8818	-0.00088249	-2.2085	-0.0010357	468.97108105597175	48.857	1.6348	48.764	48.126	49.761	-0.093178					121	39	4	0	0	0	0.80813	1	3708	3708		9.6461	0	1	745890	+		21839	26366	14713	14723	25173	25173					0.20867483400752462
KLIVHCKVSLL	11	Unmodified	_KLIVHCKVSLL_					0	0	0		ENST00000609587.1_1_18:2728435-2728615:+|nuORF	ENST00000609587.1_1_18:2728435-2728615:+|nuORF	ENST00000609587.1_1_18:2728435-2728615:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.26611328125	3	418.265176	1251.7737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.14	1	50.183	49.683	50.683	0.042236								0	0	0	0.56276	1	3925	3925		16.53	1.1967	1				21840	14486	14714	14724	25174	25174					0.15788332415627337
KLIVRIKEILA	11	Unmodified	_KLIVRIKEILA_					0	0	0		ENST00000461099.1_1_19:3576912-3578370:+|nuORF;nc|ENSG00000064961|Q9P0W2-2|HMG20B;ENST00000488973.6_1_19:3574329-3578516:+|nuORF;nc|ENSG00000064961|Q9P0W2-3|HMG20B;ENSG00000064961|ENST00000333651|HMG20B	ENST00000461099.1_1_19:3576912-3578370:+|nuORF	ENST00000461099.1_1_19:3576912-3578370:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3934326171875	2	648.442298	1294.87004	-1.1409	-0.00073983	-3.8291	-0.0024829	-4.97	-0.0032228	648.4393057072048	107.23	0.90366	107.27	106.76	107.67	0.036125					23	21	2	0	0	0	0.1728	1	11427	11427		18.262	2.6203	1	169610			21841	1115	14715	14725	25175	25175					0.23440223247234826
KLKAGYLM	8	Oxidation (M)	_KLKAGYLM(Oxidation (M))_		KLKAGYLM(1)		KLKAGYLM(47)	0	0	1		ENST00000561798.1_1_16:21991829-21994489:+|nuORF;ENSG00000140740|ENST00000268379|UQCRC2	ENST00000561798.1_1_16:21991829-21994489:+|nuORF	ENST00000561798.1_1_16:21991829-21994489:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7703552246094	2	470.270238	938.525924	-0.59681	-0.00028066	-2.8844	-0.0013564	-3.4812	-0.0016371	470.2687452652717	73.919	2.2099	74.478	73.965	76.174	0.55891					143	55	4	0	0	0	0.92176	1	8286	8286		46.766	7.7449	1	1996400			21842	4455	14716	14726	25176	25176		78			0.05420203547816982
KLKAMTLAI	9	Oxidation (M)	_KLKAM(Oxidation (M))TLAI_		KLKAM(1)TLAI		KLKAM(46)TLAI	0	0	1		ENST00000555815.5_1_15:25924490-25961922:-|nuORF;ENSG00000206190|ENST00000555815|ATP10A	ENST00000555815.5_1_15:25924490-25961922:-|nuORF	ENST00000555815.5_1_15:25924490-25961922:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	502.8141174316406	2	502.81227	1003.60999	-0.77958	-0.00039198	3.9062	0.0019641	3.1267	0.0015721	502.8142607549554	97.648	3.8306	97.648	97.03	100.86	0					234	91	5	0	0	0	0.62081	1	9832	9832		45.952	7.1458	1	9982600			21843	8555	14717	14727	25177	25177		149			0.10832734644714037
KLKAPRRSPQ	10	Unmodified	_KLKAPRRSPQ_					0	0	0			REV__ENSG00000109944|ENST00000227349|JHY	REV__ENSG00000109944|ENST00000227349|JHY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8668823242188	2	590.867289	1179.72002	-0.64255	-0.00037966	-1.0172	-0.00060105	-1.6598	-0.00098071	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.77314	1	11280	11280		40.778	0	1	52912000	+		21844	17785	14718	14728	25178	25178					0.13735296028107769
KLKAPRRSPQ	10	Unmodified	_KLKAPRRSPQ_					0	0	0			REV__ENSG00000109944|ENST00000227349|JHY	REV__ENSG00000109944|ENST00000227349|JHY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8662719726562	2	590.867289	1179.72002	0.84845	0.00050132	-2.4301	-0.0014359	-1.5816	-0.00093454	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.80179	2	10858	10858;10974		39.253	3.6345	1	94771000	+		21845	17785	14718	14728	25179;25180	25179					0.13735296028107769
KLKAQKHQNIL	11	Unmodified	_KLKAQKHQNIL_					0	0	0			REV__ENSG00000169071|ENST00000375708|ROR2	REV__ENSG00000169071|ENST00000375708|ROR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25531005859375	3	440.941861	1319.80375	-1.1723	-0.0005169	-1.1215	-0.00049452	-2.2938	-0.0010114	441.2751905818299	62.342	0.65088	62.73	62.535	63.186	0.38846					17	14	2	0	0	0	0.17305	1	6717	6717		24.232	0	1	66406	+		21846	21545	14719	14729	25181	25181					0.15664407405188285
KLKATKVTHSR	11	Unmodified	_KLKATKVTHSR_					0	0	0			REV__ENST00000522207.1_1_8:86351138-86354561:+|nuORF	REV__ENST00000522207.1_1_8:86351138-86354561:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.892822265625	2	634.893503	1267.77245	-0.0069402	-4.4063E-06	-1.6425	-0.0010428	-1.6494	-0.0010472	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.67778	1	11065	11065		35.152	2.3396	1	31286000	+		21847	28130	14720	14730	25182	25182					0.1492783437106482
KLKATKVTHSR	11	Unmodified	_KLKATKVTHSR_					0	0	0			REV__ENST00000522207.1_1_8:86351138-86354561:+|nuORF	REV__ENST00000522207.1_1_8:86351138-86354561:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8929443359375	2	634.893503	1267.77245	1.4999	0.00095225	-3.3387	-0.0021197	-1.8389	-0.0011675	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.67778	1	11420	11420		35.152	2.3396	1	68597000	+		21848	28130	14720	14730	25183	25183					0.1492783437106482
KLKDTKSRPK	10	Unmodified	_KLKDTKSRPK_					0	0	0		ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24;ENSG00000089737|ENST00000621632|DDX24;ENST00000555324.1_1_14:94545323-94547480:-|nuORF	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9188537597656	3	400.918945	1199.73501	1.7725	0.00071063	-1.2173	-0.00048804	0.5552	0.00022259	400.91834139121914	15.853	0.31401	15.363	15.255	15.569	-0.48917					10	6	2	0	0	0	0.74383	1	65	65		42.338	12.787	1	227050			21849	1632	14721	14731	25184	25184					0.1431274310543813
KLKDTKSRPK	10	Unmodified	_KLKDTKSRPK_					0	0	0		ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24;ENSG00000089737|ENST00000621632|DDX24;ENST00000555324.1_1_14:94545323-94547480:-|nuORF	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	600.8743896484375	2	600.874779	1199.73501	0.26206	0.00015747	-0.59157	-0.00035546	-0.32951	-0.000198	600.8740432437078	15.87	0.22721	15.271	15.148	15.375	-0.59873					9	5	2	0	0	0	0.053567	1	60	60		106.88	46.762	1	129580			21850	1632	14721	14731	25185	25185					0.1431274310543813
KLKDTKSRPK	10	Unmodified	_KLKDTKSRPK_					0	0	0		ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24;ENSG00000089737|ENST00000621632|DDX24;ENST00000555324.1_1_14:94545323-94547480:-|nuORF	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.9190368652344	3	400.918945	1199.73501	0.21122	8.4683E-05	0.13604	5.454E-05	0.34726	0.00013922	400.91894534261905	15.869	0.31759	15.27	15.148	15.465	-0.59873					22	7	4	0	0	0	0.86647	1	66	66		28.577	0.93281	1	264690			21851	1632	14721	14731	25186	25186					0.1431274310543813
KLKDTLKSQ	9	Unmodified	_KLKDTLKSQ_					0	0	0		nc|ENSG00000039560|Q9P0K7-4|RAI14;nc|ENSG00000039560|Q9P0K7-3|RAI14;ENSG00000039560|ENST00000265109|RAI14;nc|ENSG00000039560|Q9P0K7-2|RAI14	nc|ENSG00000039560|Q9P0K7-4|RAI14	nc|ENSG00000039560|Q9P0K7-4|RAI14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8211059570312	2	530.821681	1059.62881	-0.85099	-0.00045172	-0.35727	-0.00018965	-1.2083	-0.00064137	530.8213432265311	82.745	2.1308	82.745	82.264	84.395	0					134	52	5	0	0	0	0.76255	1	7697	7697		35.618	5.3006	1	4119600			21852	924	14722	14732	25187	25187					0.10137987540110771
KLKDTLKSQ	9	Unmodified	_KLKDTLKSQ_					0	0	0		nc|ENSG00000039560|Q9P0K7-4|RAI14;nc|ENSG00000039560|Q9P0K7-3|RAI14;ENSG00000039560|ENST00000265109|RAI14;nc|ENSG00000039560|Q9P0K7-2|RAI14	nc|ENSG00000039560|Q9P0K7-4|RAI14	nc|ENSG00000039560|Q9P0K7-4|RAI14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8204956054688	2	530.821681	1059.62881	0.66638	0.00035373	-1.9698	-0.0010456	-1.3034	-0.00069187	530.8204640085535	82.305	1.3281	82.45	81.982	83.31	0.14551					83	30	4	0	0	0	0.78912	1	7896	7896		28.081	2.6313	1	1921600			21853	924	14722	14732	25188	25188					0.10137987540110771
KLKDVKSRVF	10	Unmodified	_KLKDVKSRVF_					0	0	0		ENST00000558711.1_2_15:33192152-33192383:-|nuORF	ENST00000558711.1_2_15:33192152-33192383:-|nuORF	ENST00000558711.1_2_15:33192152-33192383:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78515625	3	407.255557	1218.74484	0.1988	8.0962E-05	-0.30824	-0.00012553	-0.10944	-4.4568E-05	407.25549631679405	29.005	0.6067	28.976	28.736	29.343	-0.029207					31	13	4	0	0	0	0.37624	1	1838	1838		14.694	3.0577	1	103560			21854	13794	14723	14733	25189	25189					0.1442193111083725
KLKEERRRK	9	Unmodified	_KLKEERRRK_					0	0	0			REV__ENSG00000152784|ENST00000415738|PRDM8	REV__ENSG00000152784|ENST00000415738|PRDM8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.39404296875	2	621.891295	1241.76804	0.92164	0.00057316	3.8568	0.0023985	4.7784	0.0029717	621.8939143072168	107.69	0.6508	107.78	107.3	107.95	0.091263					34	15	3	0	0	0	0.20789	1	11534	11534		32.812	9.2897	1	600190	+		21855	20317	14724	14734	25190	25190					0.15682369948149244
KLKEERRRK	9	Unmodified	_KLKEERRRK_					0	0	0			REV__ENSG00000152784|ENST00000415738|PRDM8	REV__ENSG00000152784|ENST00000415738|PRDM8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	621.891295	1241.76804	2.271	0.0014123	11.095	0.0068996	13.365	0.0083119	621.8986419145901	107.86	0.086151	107.95	107.88	107.97	0.084457	0.084857	0.0082815	NaN	32.812	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1357900	+		21856	20317	14724	14734							0.15682369948149244
KLKEQRRWKAR	11	Unmodified	_KLKEQRRWKAR_					0	0	0			REV__nc|ENSG00000106331|O43316-2|PAX4	REV__nc|ENSG00000106331|O43316-2|PAX4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.3062744140625	3	500.307426	1497.90045	-0.052636	-2.6334E-05	-2.3986	-0.0012	-2.4513	-0.0012264	500.30627502706477	16.612	0.66116	16.125	15.959	16.62	-0.48718					21	14	3	0	0	0	0.74405	1	149	149		23.378	1.5975	1	2208800	+		21857	29764	14725	14735	25191	25191					0.1714139468497251
KLKEQRRWKAR	11	Unmodified	_KLKEQRRWKAR_					0	0	0			REV__nc|ENSG00000106331|O43316-2|PAX4	REV__nc|ENSG00000106331|O43316-2|PAX4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	500.307426	1497.90045	0.43261	0.00021644	-2.8196	-0.0014107	-2.387	-0.0011942	500.3060463887944	16.64	0.93214	16.029	15.82	16.752	-0.6107	-0.04766	-0.00021978	NaN	23.378	30	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2118800	+		21858	29764	14725	14735							0.1714139468497251
KLKEWHEV	8	Unmodified	_KLKEWHEV_					0	0	0			REV__nc|ENSG00000163554|P02549-2|SPTA1	REV__nc|ENSG00000163554|P02549-2|SPTA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	534.7960815429688	2	534.795466	1067.57638	-0.31576	-0.00016887	0.13013	6.9592E-05	-0.18563	-9.9273E-05	534.7955123159545	57.932	0.73426	57.966	57.632	58.367	0.033905					46	20	3	0	0	0	0.92457	1	5317	5317		47.916	1.9434	1	268290	+		21859	20933	14726	14736	25192	25192					0.04529449197161739
KLKFAKRS	8	Unmodified	_KLKFAKRS_					0	0	0			REV__nc|ENSG00000145934|Q9NT68-2|TENM2	REV__nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.3141784667969	2	489.316369	976.618185	-1.0416	-0.00050969	-3.7416	-0.0018308	-4.7832	-0.0023405	489.31444436731414	95.161	1.948	95.208	94.748	96.696	0.046989					116	45	4	0	0	0	0.79929	1	10118	10118		18.324	1.8513	1	1311400	+		21860	19977	14727	14737	25193	25193					0.12894049676367558
KLKFNNLN	8	Unmodified	_KLKFNNLN_					0	0	0			REV__ENSG00000149651|ENST00000279058|SPINT4	REV__ENSG00000149651|ENST00000279058|SPINT4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.7615966796875	2	495.790184	989.565815	-1.7266	-0.00085603	-0.77004	-0.00038178	-2.4966	-0.0012378	495.78965520710443	43.767	0.5307	44.541	44.303	44.833	0.7738					29	12	3	0	0	0	0.4196	1	4017	4017		12.207	5.0135	1	863730	+		21861	20189	14728	14738	25194	25194					0.07061466542734252
KLKFSIYLALQ	11	Unmodified	_KLKFSIYLALQ_					0	0	0		ENST00000437634.1_1_2:154277901-154278186:-|nuORF	ENST00000437634.1_1_2:154277901-154278186:-|nuORF	ENST00000437634.1_1_2:154277901-154278186:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9406433105469	3	441.939346	1322.79621	-0.69974	-0.00030924	1.7402	0.00076908	1.0405	0.00045984	441.9399909148648	56.856	0.75961	56.83	56.632	57.391	-0.026108					86	36	3	0	0	0	0.75457	1	4830	4830		21.032	0.71722	1	338630			21862	11739	14729	14739	25195	25195					0.1477225508488118
KLKGPRND	8	Unmodified	_KLKGPRND_					0	0	0			REV__ENSG00000111335|ENST00000392583|OAS2	REV__ENSG00000111335|ENST00000392583|OAS2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.253173828125	2	464.272158	926.529764	0.21094	9.7934E-05	-0.079048	-3.67E-05	0.13189	6.1234E-05	464.2718702419107	85.496	1.7614	85.554	85.065	86.827	0.057899					51	40	2	0	0	0	0.4196	1	8648	8648		21.96	0	1	87655	+		21863	17867	14730	14740	25196	25196					0.06356009365879345
KLKGVIYFQAI	11	Unmodified	_KLKGVIYFQAI_					0	0	0		nc|ENSG00000144824|Q86SQ0-2|PHLDB2;nc|ENSG00000144824|Q86SQ0-3|PHLDB2;ENSG00000144824|ENST00000431670|PHLDB2;ENST00000486886.1_1_3:111680917-111693407:+|nuORF;nc|ENSG00000019144|Q86UU1-2|PHLDB1;ENSG00000019144|ENST00000600882|PHLDB1;ENST00000526537.2_1_11:118518618-118527530:+|nuORF;ENST00000530994.5_1_11:118515264-118527530:+|nuORF;ENST00000524713.5_1_11:118512334-118527530:+|nuORF;ENST00000532517.5_1_11:118498004-118527530:+|nuORF;ENSG00000176531|ENST00000292140|PHLDB3	nc|ENSG00000144824|Q86SQ0-2|PHLDB2;nc|ENSG00000019144|Q86UU1-2|PHLDB1;ENSG00000176531|ENST00000292140|PHLDB3	nc|ENSG00000144824|Q86SQ0-2|PHLDB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3929443359375	2	640.392273	1278.76999	2.3199	0.0014856	-1.2982	-0.00083133	1.0217	0.00065431	640.3913086567981	50.89	1.1946	51.642	51.12	52.315	0.75174					85	28	4	0	0	0	0.7342	1	5062	5062		25.574	2.0514	1	1438200			21864	4734;836;7086	14731	14741	25197	25197					0.14175985913402656
KLKHFHKK	8	Unmodified	_KLKHFHKK_					0	0	0		ENST00000437151.1_1_6:87680204-87680483:+|nuORF	ENST00000437151.1_1_6:87680204-87680483:+|nuORF	ENST00000437151.1_1_6:87680204-87680483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	533.3402709960938	2	533.337636	1064.66072	0.82148	0.00043812	4.0565	0.0021635	4.878	0.0026016	533.3397014288719	99.113	2.1038	99.27	98.724	100.83	0.15659					144	48	4	0	0	0	0.82419	2	10329	10270;10329		13.775	0.69583	1	2216600			21865	11733	14732	14742	25198;25199	25199					0.1309744480458903
KLKHLTVMG	9	Unmodified	_KLKHLTVMG_					0	0	0			REV__nc|ENSG00000172421|Q8N7B9-2|EFCAB3	REV__nc|ENSG00000172421|Q8N7B9-2|EFCAB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8087158203125	2	513.810062	1025.60557	-0.30203	-0.00015519	-1.7325	-0.00089016	-2.0345	-0.0010453	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.78536	1	4260	4260		29.15	0	1	861580	+		21866	30029	14733	14743	25200	25200					0.09379270221802471
KLKILKMA	8	Unmodified	_KLKILKMA_					0	0	0			REV__nc|ENSG00000205726|Q15811-5|ITSN1;REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2;REV__nc|ENSG00000205726|Q15811-4|ITSN1	REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2876892089844	2	472.819899	943.625244	0.72518	0.00034288	0.60241	0.00028483	1.3276	0.00062771	472.81983337916864	95.237	0.36151	95.4	95.071	95.433	0.16308					11	8	2	0	0	0	0.4196	1	9769	9769		19.36	5.5846	1	96350	+		21867	30147;30173;23573	14734	14744	25201	25201					0.1511764623256795
KLKIVRQPTPK	11	Unmodified	_KLKIVRQPTPK_					0	0	0			REV__nc|ENSG00000155729|Q6PI47-3|KCTD18	REV__nc|ENSG00000155729|Q6PI47-3|KCTD18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.62139892578125	3	436.62224	1306.84489	0.4795	0.00020936	-2.3815	-0.0010398	-1.902	-0.00083047	436.6210757141986	20.236	0.9153	19.777	19.408	20.323	-0.4591					45	19	3	0	0	0	0.77803	1	624	624		15.921	1.8346	1	319840	+		21868	20441	14735	14745	25202	25202					0.20374168444641327
KLKKESIIRC	10	Unmodified	_KLKKESIIRC_					0	0	0			REV__nc|ENSG00000141524|Q7Z403-3|TMC6	REV__nc|ENSG00000141524|Q7Z403-3|TMC6	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.5840759277344	3	406.584797	1216.73256	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.82	1	117.91	117.41	118.41	0.087753								0	0	0	0.45132	1	12457	12457		20.03	4.6974	1		+		21869	29895	14736	14746	25203	25203					0.1328657137614755
KLKKKVAIFIF	11	Unmodified	_KLKKKVAIFIF_					0	0	0			REV__ENST00000527958.5_1_11:117041336-117041564:+|nuORF	REV__ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.6358642578125	3	445.635598	1333.88496	-0.08769	-3.9078E-05	0.76804	0.00034227	0.68035	0.00030319	445.6358753524641	36.614	1.1516	36.896	36.681	37.833	0.28173					135	27	6	0	0	0	0.80593	3	2888	2876;2888;2900		10.104	5.7651	1	11171000	+		21870	28240	14737	14747	25204;25205;25206	25205					0.23137715115194624
KLKKKVAIFIF	11	Unmodified	_KLKKKVAIFIF_					0	0	0			REV__ENST00000527958.5_1_11:117041336-117041564:+|nuORF	REV__ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.6360778808594	3	445.635598	1333.88496	1.3928	0.00062067	-0.74884	-0.00033371	0.64393	0.00028696	445.6352024508616	36.513	1.0806	36.953	36.745	37.825	0.44043					121	25	6	0	0	0	0.7896	1	2893	2893		13.508	1.0751	1	12493000	+		21871	28240	14737	14747	25207	25207					0.23137715115194624
KLKKKYKNSE	10	Unmodified	_KLKKKYKNSE_					0	0	0		nc|ENSG00000089091|Q9NVP4-3|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-3|DZANK1	nc|ENSG00000089091|Q9NVP4-3|DZANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.59307861328125	3	422.590717	1264.75032	1.8674	0.00078915	3.7839	0.001599	5.6513	0.0023882	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.86931	1	4929	4929		14.086	2.4501	1	997830			21872	1607	14738	14748	25208	25208					0.12853609902640528
KLKKMIHIG	9	Unmodified	_KLKKMIHIG_					0	0	0			REV__ENSG00000119661|ENST00000553645|DNAL1	REV__ENSG00000119661|ENST00000553645|DNAL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2925415039062	2	534.341529	1066.66851	-0.062217	-3.3245E-05	-0.80905	-0.00043231	-0.87127	-0.00046555	534.3415380122015	26.841	0.13526	26.665	26.568	26.703	-0.17559					4	2	2	0	0	0	0.20789	1	1493	1493		7.6903	0	1	21784	+		21873	18365	14739	14749	25209	25209					0.1378383600986126
KLKKMPGT	8	Unmodified	_KLKKMPGT_					0	0	0		nc|ENSG00000221866|Q9HCM2-2|PLXNA4	nc|ENSG00000221866|Q9HCM2-2|PLXNA4	nc|ENSG00000221866|Q9HCM2-2|PLXNA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.77978515625	2	451.778231	901.541908	-0.13936	-6.2962E-05	3.9691	0.0017932	3.8297	0.0017302	451.78016542853146	86.777	1.2456	86.844	86.37	87.616	0.067444					84	28	4	0	0	0	0.86791	1	8766	8766		28.254	4.0515	1	241100			21874	15258	14740	14750	25210	25210					0.08719909784736046
KLKKMPGT	8	Unmodified	_KLKKMPGT_					0	0	0		nc|ENSG00000221866|Q9HCM2-2|PLXNA4	nc|ENSG00000221866|Q9HCM2-2|PLXNA4	nc|ENSG00000221866|Q9HCM2-2|PLXNA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7801208496094	2	451.778231	901.541908	1.0261	0.00046357	2.9325	0.0013249	3.9586	0.0017884	451.779676395938	86.614	1.2405	86.669	86.189	87.43	0.055641					81	28	4	0	0	0	0.90465	1	8834	8834		40.573	10.069	1	295460			21875	15258	14740	14750	25211	25211					0.08719909784736046
KLKKNKKETV	10	Unmodified	_KLKKNKKETV_					0	0	0			REV__ENST00000488073.1_1_7:1149040-1167021:-|nuORF	REV__ENST00000488073.1_1_7:1149040-1167021:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7845764160156	3	405.930962	1214.77106	0.13855	5.6243E-05	4.4831	0.0018198	4.6216	0.0018761	405.93280427353636	34.743	0.7865	34.849	34.45	35.236	0.10604					73	33	3	0	0	0	0.37624	1	1788	1788		15.333	0	1	135370	+		21876	20023	14741	14751	25212	25212					0.17226200282311765
KLKKNKKNSH	10	Unmodified	_KLKKNKKNSH_					0	0	0		nc|ENSG00000116127|Q8TCU4-2|ALMS1;ENSG00000116127|ENST00000613296|ALMS1;ENST00000450720.5_1_2:73899456-73899975:+|nuORF	nc|ENSG00000116127|Q8TCU4-2|ALMS1	nc|ENSG00000116127|Q8TCU4-2|ALMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.88037109375	2	612.880396	1223.74624	0.28933	0.00017733	-1.62	-0.00099287	-1.3307	-0.00081554	612.8792234651027	104.57	3.8669	104.61	104	107.87	0.039864					305	91	6	0	0	0	0.8608	1	11545	11545		34.173	11.13	1	50996000			21877	2899	14742	14752	25213	25213					0.14331565199586294
KLKKRFLRKP	10	Unmodified	_KLKKRFLRKP_					0	0	0		ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2632141113281	3	438.634591	1312.88194	0.27011	0.00011848	0.93142	0.00040855	1.2015	0.00052703	438.6345728755568	35.332	0.23066	35.58	35.477	35.707	0.24769					7	5	2	0	0	0	0.37624	1	2689	2689		10.587	0.94066	1	57009			21878	9016	14743	14753	25214	25214					0.23801884781028093
KLKKTETQEK	10	Unmodified	_KLKKTETQEK_					0	0	0		ENSG00000205542|ENST00000451311|TMSB4X;ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000034510|ENST00000233143|TMSB10;CON__P21752	ENSG00000205542|ENST00000451311|TMSB4X;ENSG00000034510|ENST00000233143|TMSB10	ENSG00000034510|ENST00000233143|TMSB10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.5786437988281	3	411.578477	1231.7136	1.2826	0.00052788	-1.0473	-0.00043106	0.23525	9.6824E-05	411.57799063847847	15.76	0.38714	15.271	15.182	15.569	-0.48917					22	9	4	0	0	0	0.11784	2	41	41;51		99.013	30.167	1	863580		+	21879	8531;596	14744	14754	25215;25216	25215					0.10701313286085679
KLKKTETQEK	10	Unmodified	_KLKKTETQEK_					0	0	0		ENSG00000205542|ENST00000451311|TMSB4X;ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000034510|ENST00000233143|TMSB10;CON__P21752	ENSG00000205542|ENST00000451311|TMSB4X;ENSG00000034510|ENST00000233143|TMSB10	ENSG00000034510|ENST00000233143|TMSB10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	616.8635864257812	2	616.864077	1231.7136	0.8286	0.00051113	-0.71795	-0.00044288	0.11065	6.8254E-05	616.8635587898782	15.76	0.36897	15.271	15.16	15.529	-0.48917					25	9	4	0	0	0	1.6138E-11	2	42	42;52		154.01	82.134	1	656720		+	21880	8531;596	14744	14754	25217;25218	25217					0.10701313286085679
KLKKTETQEK	10	Unmodified	_KLKKTETQEK_					0	0	0		ENSG00000205542|ENST00000451311|TMSB4X;ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000034510|ENST00000233143|TMSB10;CON__P21752	ENSG00000205542|ENST00000451311|TMSB4X;ENSG00000034510|ENST00000233143|TMSB10	ENSG00000034510|ENST00000233143|TMSB10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.5787353515625	3	411.578477	1231.7136	0.35049	0.00014425	-0.014866	-6.1183E-06	0.33562	0.00013813	411.57841487308986	15.798	0.35396	15.199	15.068	15.422	-0.59873					27	9	4	0	0	0	0.098191	2	54	46;54		101.46	16.299	1	1057400		+	21881	8531;596	14744	14754	25219;25220	25220					0.10701313286085679
KLKKTETQEK	10	Unmodified	_KLKKTETQEK_					0	0	0		ENSG00000205542|ENST00000451311|TMSB4X;ENSG00000154620|ENST00000284856|TMSB4Y;ENSG00000034510|ENST00000233143|TMSB10;CON__P21752	ENSG00000205542|ENST00000451311|TMSB4X;ENSG00000034510|ENST00000233143|TMSB10	ENSG00000034510|ENST00000233143|TMSB10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	616.8636474609375	2	616.864077	1231.7136	0.86845	0.00053572	-0.74828	-0.00046159	0.12017	7.4131E-05	616.8635232225876	15.798	0.30668	15.199	15.068	15.375	-0.59873					22	8	4	0	0	0	0.016148	1	51	51		125.71	40.552	1	737790		+	21882	8531;596	14744	14754	25221	25221					0.10701313286085679
KLKKTKKR	8	Unmodified	_KLKKTKKR_					0	0	0		nc|ENSG00000084093|Q13127-4|REST;ENSG00000084093|ENST00000309042|REST	nc|ENSG00000084093|Q13127-4|REST	nc|ENSG00000084093|Q13127-4|REST	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	515.8682861328125	2	515.366393	1028.71823	-1.565	-0.00080653	2.0152	0.0010386	0.45023	0.00023204	515.3675277002984	109	0.29034	109.02	108.86	109.15	0.020561					24	14	2	0	0	0	0.90347	1	11638	11638		6.7355	0	1	842840			21883	1512	14745	14755	25222	25222					0.20502287010162945
KLKLNVLTIIL	11	Unmodified	_KLKLNVLTIIL_					0	0	0		nc|ENSG00000068366|O60488|ACSL4	nc|ENSG00000068366|O60488|ACSL4	nc|ENSG00000068366|O60488|ACSL4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8928833007812	2	634.439224	1266.86389	1.3236	0.00083972	0.48287	0.00030635	1.8064	0.0011461	634.9422975669726	105.95	0.24351	105.99	105.87	106.11	0.03833					8	5	2	0	0	0	0.17551	1	11585	11585		37.812	7.4938	1	49727			21884	14770	14746	14756	25223	25223					0.2411370501570218
KLKLRPRIRPR	11	Unmodified	_KLKLRPRIRPR_					0	0	0		ENSG00000270765|ENST00000604641|GAS2L2	ENSG00000270765|ENST00000604641|GAS2L2	ENSG00000270765|ENST00000604641|GAS2L2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.326416015625	3	478.328161	1431.96265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.385	1	73.773	73.273	74.273	0.38779								0	0	0	0.56276	1	8234	8234		3.026	0	1				21885	8975	14747	14757	25224	25224					0.2639516582394208
KLKLVNGTRGR	11	Unmodified	_KLKLVNGTRGR_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3927612304688	2	621.39367	1240.77279	0.6984	0.00043398	-2.1901	-0.0013609	-1.4917	-0.00092692	621.3922056168815	104.57	2.6797	104.61	104.09	106.77	0.039856					250	63	5	0	0	0	0.638	4	11353	11353;11400;11460;11485		40.058	10.888	1	13976000	+		21886	23196	14748	14758	25225;25226;25227;25228	25225					0.16203254090896735
KLKLVNGTRGR	11	Unmodified	_KLKLVNGTRGR_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3926391601562	2	621.39367	1240.77279	1.3	0.00080781	-2.832	-0.0017598	-1.532	-0.00095195	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.68532	1	11102	11102		33.922	0	1	23079000	+		21887	23196	14748	14758	25229	25229					0.16203254090896735
KLKLVNGTRGR	11	Unmodified	_KLKLVNGTRGR_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3923950195312	2	621.39367	1240.77279	0.9213	0.00057249	-2.6214	-0.0016289	-1.7001	-0.0010564	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.67778	3	11117	11093;11117;11141		35.152	2.4771	1	22352000	+		21888	23196	14748	14758	25230;25231;25232	25231					0.16203254090896735
KLKLVNGTRGR	11	Unmodified	_KLKLVNGTRGR_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3934936523438	2	621.39367	1240.77279	0.92124	0.00057246	-1.5281	-0.00094954	-0.60683	-0.00037708	621.3925512557826	106.19	2.0795	106.29	105.91	107.99	0.099007					149	50	5	0	0	0	0.6921	1	11376	11376		32.812	0	1	2148500	+		21889	23196	14748	14758	25233	25233					0.16203254090896735
KLKLVNGTRGR	11	Unmodified	_KLKLVNGTRGR_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3925170898438	2	621.39367	1240.77279	-1.2196	-0.00075786	-0.45293	-0.00028145	-1.6726	-0.0010393	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.67778	1	11006	11006		35.152	10.633	1	23459000	+		21890	23196	14748	14758	25234	25234					0.16203254090896735
KLKPVHGLIF	10	Unmodified	_KLKPVHGLIF_					0	0	0		nc|ENSG00000116750|Q9Y5K5-2|UCHL5;nc|ENSG00000116750|Q9Y5K5-4|UCHL5;ENSG00000116750|ENST00000367454|UCHL5;nc|ENSG00000116750|Q9Y5K5|UCHL5	nc|ENSG00000116750|Q9Y5K5-2|UCHL5	nc|ENSG00000116750|Q9Y5K5-2|UCHL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3671875	2	576.368601	1150.72265	-2.5571	-0.0014738	1.6995	0.00097954	-0.85763	-0.00049431	576.3693880247914	40.386	2.6783	40.778	38.947	41.625	0.39209					154	68	5	0	0	0	0.86201	2	3489	3464;3489		30.504	0	1	8015200			21891	2945	14749	14759	25235;25236	25236					0.15331751433086538
KLKPVHGLIF	10	Unmodified	_KLKPVHGLIF_					0	0	0		nc|ENSG00000116750|Q9Y5K5-2|UCHL5;nc|ENSG00000116750|Q9Y5K5-4|UCHL5;ENSG00000116750|ENST00000367454|UCHL5;nc|ENSG00000116750|Q9Y5K5|UCHL5	nc|ENSG00000116750|Q9Y5K5-2|UCHL5	nc|ENSG00000116750|Q9Y5K5-2|UCHL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3651123046875	2	576.368601	1150.72265	-1.8889	-0.0010887	1.4195	0.00081817	-0.46939	-0.00027054	576.3692460621713	40.332	1.1916	40.921	40.26	41.451	0.58915					99	31	4	0	0	0	0.71042	1	3452	3452		44.117	4.864	1	6057000			21892	2945	14749	14759	25237	25237					0.15331751433086538
KLKQELKTY	9	Unmodified	_KLKQELKTY_					0	0	0			REV__nc|ENSG00000137216|Q5T3F8-3|TMEM63B	REV__nc|ENSG00000137216|Q5T3F8-3|TMEM63B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8436889648438	2	575.845156	1149.67576	-0.99734	-0.00057431	-2.9254	-0.0016846	-3.9227	-0.0022589	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.7932	1	9767	9767		26.693	1.1189	1	5638300	+		21893	19368	14750	14760	25238	25238					0.10690847091291289
KLKQKDEY	8	Unmodified	_KLKQKDEY_					0	0	0			REV__ENST00000593174.5_1_19:13869843-13873879:+|nuORF	REV__ENST00000593174.5_1_19:13869843-13873879:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.283447265625	2	526.292756	1050.57096	-0.53164	-0.0002798	-0.028538	-1.5019E-05	-0.56018	-0.00029482	526.2927659501818	59.52	0.49688	59.553	59.336	59.833	0.032825					14	11	2	0	0	0	0.4196	1	5508	5508		20.947	0	1	55759	+		21894	17491	14751	14761	25239	25239					0.04769725614710296
KLKQLQQLD	9	Unmodified	_KLKQLQQLD_					0	0	0			REV__nc|ENSG00000173809|Q587J7|TDRD12	REV__nc|ENSG00000173809|Q587J7|TDRD12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	557.8099365234375	2	557.334956	1112.65536	-1.3314	-0.00074205	0.43183	0.00024067	-0.8996	-0.00050138	557.3353387353245	44.216	0.43792	45.06	44.862	45.3	0.84438					19	10	2	0	0	0	0.20789	1	4048	4048		40.778	1.5253	1	303240	+		21895	15695	14752	14762	25240	25240					0.1035367643146401
KLKQLQQLD	9	Unmodified	_KLKQLQQLD_					0	0	0			REV__nc|ENSG00000173809|Q587J7|TDRD12	REV__nc|ENSG00000173809|Q587J7|TDRD12	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	557.334956	1112.65536	-0.37682	-0.00021001	0.3071	0.00017116	-0.069715	-3.8855E-05	557.3348698883838	44.422	0.40209	44.872	44.691	45.093	0.45025	-0.093973	-7.6378E-05	NaN	40.778	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	196440	+		21896	15695	14752	14762							0.1035367643146401
KLKQNKLSIRE	11	Unmodified	_KLKQNKLSIRE_					0	0	0		chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.9484558105469	3	452.948904	1355.82488	-0.13662	-6.1882E-05	-1.7746	-0.0008038	-1.9112	-0.00086568	452.9480465279169	107.9	0.27702	107.86	107.61	107.89	-0.042404					16	6	3	0	0	0	0.69687	1	11725	11725		32.034	6.9081	1	4158800			21897	152	14753	14763	25241	25241					0.1612037271402187
KLKQNKLSIRE	11	Unmodified	_KLKQNKLSIRE_					0	0	0		chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.9482116699219	3	452.948904	1355.82488	2.7606	0.0012504	-3.8989	-0.001766	-1.1383	-0.00051559	452.94702271290186	107.29	1.0208	107.26	106.62	107.64	-0.034134					78	23	5	0	0	0	0.76087	1	11915	11915		19.627	0	1	3060000			21898	152	14753	14763	25242	25242					0.1612037271402187
KLKQNKLSIRE	11	Unmodified	_KLKQNKLSIRE_					0	0	0		chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	452.948904	1355.82488	-1.1931	-0.0005404	-0.58482	-0.00026489	-1.7779	-0.0008053	453.2830739211877	107.81	0.41713	107.95	107.61	108.03	0.13867	0.087289	0.00094414	NaN	32.034	33	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7346700			21899	152	14753	14763							0.1612037271402187
KLKQNKLSIRE	11	Unmodified	_KLKQNKLSIRE_					0	0	0		chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	452.948904	1355.82488	0.75683	0.0003428	-2.2164	-0.0010039	-1.4596	-0.00066111	452.94777186841515	107.82	0.30502	107.91	107.67	107.98	0.089119	0.048714	-0.0012729	NaN	32.034	28	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5712500			21900	152	14753	14763							0.1612037271402187
KLKQNKLSIRE	11	Unmodified	_KLKQNKLSIRE_					0	0	0		chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	chr13:32522270-32537006|17|11.82|0.41|4.84|-|0|N4BP2L2,N4BP2L2|1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	452.948904	1355.82488	-1.7681	-0.00080086	1.1821	0.00053542	-0.58603	-0.00026544	452.9493057813055	107.79	0.39688	107.83	107.54	107.93	0.036125	-0.030745	0.0033451	NaN	32.034	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3118400			21901	152	14753	14763							0.1612037271402187
KLKQVQSPPTE	11	Unmodified	_KLKQVQSPPTE_					0	0	0		ENSG00000069206|ENST00000175238|ADAM7	ENSG00000069206|ENST00000175238|ADAM7	ENSG00000069206|ENST00000175238|ADAM7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8541870117188	2	627.856252	1253.69795	1.2754	0.00080079	-2.6639	-0.0016726	-1.3885	-0.00087176	627.8543771901267	15.798	0.15697	15.199	15.091	15.248	-0.59873					7	4	2	0	0	0	0.31387	1	47	47		72.879	7.4139	1	190170			21902	1215	14754	14764	25243	25243					0.08125026769039323
KLKRDVNLYRN	11	Unmodified	_KLKRDVNLYRN_					0	0	0			REV__nc|ENSG00000105479|Q96M63-5|ODAD1	REV__nc|ENSG00000105479|Q96M63-5|ODAD1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	473.6114196777344	3	473.612404	1417.81538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.685	1	30.748	30.248	31.248	0.063122								0	0	0	0.56276	1	1361	1361		22.562	7.2285	1		+		21903	17543	14755	14765	25244	25244					0.12318604428492108
KLKRGRPG	8	Unmodified	_KLKRGRPG_					0	0	0		nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170004|Q12873-2|CHD3;ENSG00000170004|ENST00000330494|CHD3;ENST00000572579.1_1_17:7796637-7797935:+|nuORF	nc|ENSG00000170004|Q12873-3|CHD3	nc|ENSG00000170004|Q12873-3|CHD3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.772705078125	2	456.29851	910.582468	-1.1656	-0.00053188	-4.0763	-0.00186	-5.2419	-0.0023919	456.2961074558792	89.664	0.21817	89.877	89.692	89.91	0.21272					6	4	2	0	0	0	0.4196	1	8953	8953		19.36	6.4008	1	61324			21904	15087	14756	14766	25245	25245					0.1236001221936931
KLKRKLPADFK	11	Unmodified	_KLKRKLPADFK_					0	0	0		ENSG00000189233|ENST00000413272|NUGGC	ENSG00000189233|ENST00000413272|NUGGC	ENSG00000189233|ENST00000413272|NUGGC	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2638244628906	3	448.62224	1342.84489	0.42833	0.00019216	0.15255	6.8438E-05	0.58088	0.0002606	448.62234713805896	64.979	0.40133	65.104	64.84	65.241	0.12431					17	14	2	0	0	0	0.17784	1	5754	5754		17.167	12.024	1	107260			21905	7998	14757	14767	25246	25246					0.1871816844463865
KLKRMAIKVEQ	11	Unmodified	_KLKRMAIKVEQ_					0	0	0			REV__ENSG00000165762|ENST00000641885|OR4K2	REV__ENSG00000165762|ENST00000641885|OR4K2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.6090393066406	3	448.611235	1342.81188	-0.14499	-6.5045E-05	-3.9925	-0.0017911	-4.1374	-0.0018561	448.60923938529277	75.242	1.1404	75.288	74.855	75.996	0.045952					95	34	4	0	0	0	0.77803	1	7243	7243		15.921	1.8346	1	303390	+		21906	21215	14758	14768	25247	25247					0.15418218330273703
KLKRRFAF	8	Unmodified	_KLKRRFAF_					0	0	0			REV__ENST00000552606.1_1_12:82750710-82752155:-|nuORF	REV__ENST00000552606.1_1_12:82750710-82752155:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	533.3401489257812	2	533.337636	1064.66072	0.82148	0.00043812	4.0565	0.0021635	4.878	0.0026016	533.3397014288719	99.113	2.1038	99.27	98.724	100.83	0.15659					144	48	4	0	0	0	0.81548	2	10293	10293;10377		21.702	7.0382	1	2216600	+		21907	19094	14759	14769	25248;25249	25248					0.1309744480458903
KLKRTIPKFMR	11	Unmodified	_KLKRTIPKFMR_					0	0	0			REV__L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|146|3|sense	REV__L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|146|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.2991943359375	3	473.298991	1416.87514	-1.7019	-0.00080553	2.0506	0.00097056	0.34869	0.00016503	473.2998390054578	107.66	0.60316	107.7	107.33	107.93	0.036125					45	14	5	0	0	0	0.79716	1	11484	11484		11.932	1.3456	1	2578500	+		21908	29578	14760	14770	25250	25250					0.18338203838175104
KLKSGKKK	8	Unmodified	_KLKSGKKK_					0	0	0			REV__nc|ENSG00000149527|O75038-3|PLCH2	REV__nc|ENSG00000149527|O75038-3|PLCH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.7821960449219	2	458.818744	915.622936	0.0412	1.8903E-05	-1.1834	-0.00054297	-1.1422	-0.00052407	458.8182754213447	20.761	0.098858	20.837	20.801	20.9	0.075848					5	4	2	0	0	0	0.4196	1	535	535		102.77	3.3984	1	37670	+		21909	20177	14761	14771	25251	25251					0.1617493381913846
KLKSIERTT	9	Unmodified	_KLKSIERTT_					0	0	0		ENSG00000099260|ENST00000263174|PALMD;nc|ENSG00000099260|Q9NP74-2|PALMD	ENSG00000099260|ENST00000263174|PALMD	ENSG00000099260|ENST00000263174|PALMD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3276977539062	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12345	12345		16.473	0	1	4041000			21910	1751	14762	14772	25252	25252					0.10537389914406958
KLKTANDIK	9	Unmodified	_KLKTANDIK_					0	0	0		nc|ENSG00000172421|Q8N7B9-2|EFCAB3	nc|ENSG00000172421|Q8N7B9-2|EFCAB3	nc|ENSG00000172421|Q8N7B9-2|EFCAB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8170776367188	2	515.816399	1029.61824	-0.43601	-0.0002249	0.45895	0.00023674	0.022941	1.1833E-05	515.8164429194935	38.952	0.4656	39.294	39.022	39.488	0.34187					17	10	3	0	0	0	0.58063	1	3238	3238		47.96	1.9873	1	222490			21911	15097	14763	14773	25253	25253					0.10462004885675924
KLKTAPLPPAS	11	Unmodified	_KLKTAPLPPAS_					0	0	0		nc|ENSG00000110713|P52948-2|NUP98;ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-6|NUP98	nc|ENSG00000110713|P52948-2|NUP98	nc|ENSG00000110713|P52948-2|NUP98	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.8453369140625	2	561.847699	1121.68084	-0.47672	-0.00026785	-2.9318	-0.0016472	-3.4085	-0.0019151	561.8459227560618	97.238	1.868	97.238	96.81	98.678	0					92	44	4	0	0	0	0.67778	1	9715	9715		35.152	15.155	1	643900			21912	2536	14764	14774	25254	25254					0.12487150953893433
KLKTAPLPPAS	11	Unmodified	_KLKTAPLPPAS_					0	0	0		nc|ENSG00000110713|P52948-2|NUP98;ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-6|NUP98	nc|ENSG00000110713|P52948-2|NUP98	nc|ENSG00000110713|P52948-2|NUP98	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.8458862304688	2	561.847699	1121.68084	-1.2102	-0.00067997	-2.2064	-0.0012396	-3.4166	-0.0019196	561.8462778990414	97.077	2.3757	97.139	96.565	98.941	0.062225					142	54	5	0	0	0	0.65746	3	10210	10188;10210;10223		37.812	9.578	1	1718900			21913	2536	14764	14774	25255;25256;25257	25256					0.12487150953893433
KLKTAPLPPAS	11	Unmodified	_KLKTAPLPPAS_					0	0	0		nc|ENSG00000110713|P52948-2|NUP98;ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-6|NUP98	nc|ENSG00000110713|P52948-2|NUP98	nc|ENSG00000110713|P52948-2|NUP98	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.8456420898438	2	561.847699	1121.68084	0.41142	0.00023115	-3.9205	-0.0022027	-3.509	-0.0019715	561.8453227320805	96.693	1.8248	96.924	96.437	98.262	0.23103					107	42	4	0	0	0	0.60058	3	9996	9938;9958;9996		44.377	20.174	1	1323100			21914	2536	14764	14774	25258;25259;25260	25260					0.12487150953893433
KLKTAPLPPAS	11	Unmodified	_KLKTAPLPPAS_					0	0	0		nc|ENSG00000110713|P52948-2|NUP98;ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-6|NUP98	nc|ENSG00000110713|P52948-2|NUP98	nc|ENSG00000110713|P52948-2|NUP98	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	561.845458984375	2	561.847699	1121.68084	0.82777	0.00046508	-4.3751	-0.0024581	-3.5473	-0.001993	561.8450907704936	96.8	1.7474	96.963	96.403	98.15	0.16317					98	40	4	0	0	0	0.66929	1	10001	10001		36.447	2.2742	1	906900			21915	2536	14764	14774	25261	25261					0.12487150953893433
KLKTIKDEGSP	11	Unmodified	_KLKTIKDEGSP_					0	0	0			REV__nc|ENSG00000165288|Q6RI45-3|BRWD3	REV__nc|ENSG00000165288|Q6RI45-3|BRWD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.8213500976562	2	608.350803	1214.68705	0.037158	2.2605E-05	-3.064	-0.001864	-3.0269	-0.0018414	608.8502729776228	70.985	0.77337	71.532	71.049	71.822	0.54756					29	18	2	0	0	0	0.17376	1	7887	7887		26.063	6.0666	1	302810	+		21916	21172	14765	14775	25262	25262					0.088296243947525
KLKTKPLPPD	10	Unmodified	_KLKTKPLPPD_					0	0	0		nc|ENSG00000102531|Q9Y2H6-2|FNDC3A;ENSG00000102531|ENST00000492622|FNDC3A	nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8536376953125	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.80179	1	10532	10532		39.253	7.723	1	34546000			21917	2007	14766	14776	25263	25263					0.13407437470914374
KLKTKPLPPD	10	Unmodified	_KLKTKPLPPD_					0	0	0		nc|ENSG00000102531|Q9Y2H6-2|FNDC3A;ENSG00000102531|ENST00000492622|FNDC3A	nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.853271484375	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.77314	1	10975	10975		40.778	0	1	50786000			21918	2007	14766	14776	25264	25264					0.13407437470914374
KLKTLMATVFN	11	Unmodified	_KLKTLMATVFN_					0	0	0			REV__ENST00000568218.2_1_15:32605934-32606516:-|nuORF	REV__ENST00000568218.2_1_15:32605934-32606516:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.581787109375	3	422.581053	1264.72133	-0.18543	-7.8358E-05	2.4476	0.0010343	2.2622	0.00095596	422.58203704906714	97.831	3.5899	97.888	96.517	100.11	0.056831					202	83	4	0	0	0	0.732	1	10411	10411		23.514	2.4821	1	436660	+		21919	17108	14767	14777	25265	25265					0.09955749282016768
KLKVKRWKKIY	11	Unmodified	_KLKVKRWKKIY_					0	0	0		L1M4_dup6020|chr5:141114522-141116487:+|3.0372164577870437|0.2312685431788466|3.72|63.0|12|1|sense	L1M4_dup6020|chr5:141114522-141116487:+|3.0372164577870437|0.2312685431788466|3.72|63.0|12|1|sense	L1M4_dup6020|chr5:141114522-141116487:+|3.0372164577870437|0.2312685431788466|3.72|63.0|12|1|sense	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.8770446777344	3	497.329168	1488.96567	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.2	1	115.2	114.7	115.7	0								0	0	0	0.56276	1	11856	11856		3.4087	1.99	1				21920	14519	14768	14778	25266	25266					0.24074996158105932
KLKVKVWNLN	10	Unmodified	_KLKVKVWNLN_					0	0	0		ENST00000445741.5_1_8:119391914-119593084:-|nuORF	ENST00000445741.5_1_8:119391914-119593084:-|nuORF	ENST00000445741.5_1_8:119391914-119593084:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3929443359375	2	621.390065	1240.76558	2.9766	0.0018496	1.2761	0.00079293	4.2527	0.0026426	621.3907359645153	104.71	2.7313	104.66	104.1	106.83	-0.04039					247	64	5	0	0	0	0.86718	1	11616	11616		27.882	2.3082	1	12926000			21921	11828	14769	14779	25267	25267					0.1548252149052587
KLKVTGTE	8	Unmodified	_KLKVTGTE_					0	0	0		nc|ENSG00000185053|Q96LD1|SGCZ;ENSG00000185053|ENST00000382080|SGCZ	nc|ENSG00000185053|Q96LD1|SGCZ	nc|ENSG00000185053|Q96LD1|SGCZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2615051269531	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.82658	1	3062	3062		21.96	1.013	1	21381000			21922	7676	14770	14780	25268	25268					0.07010669040244011
KLLAHSPLL	9	Unmodified	_KLLAHSPLL_					0	0	0			REV__ENST00000602717.5_1_14:77743417-77745166:-|nuORF	REV__ENST00000602717.5_1_14:77743417-77745166:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	496.31805419921875	2	496.318577	990.622602	-0.81722	-0.0004056	0.81313	0.00040357	-0.0040906	-2.0302E-06	496.31866474020734	19.707	0.28546	19.637	19.577	19.863	-0.070013					16	11	2	0	0	0	0.7932	1	453	453		18.324	2.6826	1	35755	+		21923	29335	14771	14781	25269	25269					0.12691514099276446
KLLCFALF	8	Unmodified	_KLLCFALF_					0	0	0		ENST00000262370.11_1_16:4674930-4700423:+|nuORF	ENST00000262370.11_1_16:4674930-4700423:+|nuORF	ENST00000262370.11_1_16:4674930-4700423:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.2040710449219	2	477.777699	953.540846	-0.73139	-0.00034944	0.12673	6.0549E-05	-0.60466	-0.00028889	477.7777174120448	30.208	0.69886	30.118	29.875	30.573	-0.089544					29	15	4	0	0	0	0.4196	1	2036	2036		8.8223	0	1	370930			21924	9434	14772	14782	25270	25270					0.0622169541582025
KLLCSISKL	9	Unmodified	_KLLCSISKL_					0	0	0			REV__ENST00000220592.9_2_8:141541824-141541974:-|nuORF	REV__ENST00000220592.9_2_8:141541824-141541974:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	502.81414794921875	2	502.81227	1003.60999	-0.46142	-0.00023201	3.207	0.0016125	2.7456	0.0013805	502.81389715137584	97.081	3.6095	97.312	96.652	100.26	0.23103					270	84	6	0	0	0	0.7932	1	10122	10122		21.96	0	1	29832000	+		21925	24153	14773	14783	25271	25271					0.10832734644725406
KLLDDPSKQK	10	Unmodified	_KLLDDPSKQK_					0	0	0		nc|ENSG00000108604|Q92925-3|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;ENSG00000108604|ENST00000448276|SMARCD2;nc|ENSG00000082014|Q6STE5-2|SMARCD3;ENSG00000082014|ENST00000262188|SMARCD3	nc|ENSG00000108604|Q92925-3|SMARCD2	nc|ENSG00000108604|Q92925-3|SMARCD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.329345703125	2	586.337695	1170.66084	0.94331	0.0005531	-1.1707	-0.00068643	-0.2274	-0.00013333	586.3367835555329	23.561	0.5976	22.987	22.664	23.262	-0.57415					21	13	2	0	0	0	0.31985	1	1073	1073		70.816	9.1249	1	231750			21926	2421	14774	14784	25272	25272					0.08233355223273975
KLLDDPSKQK	10	Unmodified	_KLLDDPSKQK_					0	0	0		nc|ENSG00000108604|Q92925-3|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;ENSG00000108604|ENST00000448276|SMARCD2;nc|ENSG00000082014|Q6STE5-2|SMARCD3;ENSG00000082014|ENST00000262188|SMARCD3	nc|ENSG00000108604|Q92925-3|SMARCD2	nc|ENSG00000108604|Q92925-3|SMARCD2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	586.337695	1170.66084	-0.12816	-7.5145E-05	-0.10362	-6.0758E-05	-0.23178	-0.0001359	586.3373429686004	23.604	0.56009	23.222	22.973	23.533	-0.38178	0.11726	0.00070843	NaN	70.816	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	231040			21927	2421	14774	14784							0.08233355223273975
KLLEAATP	8	Unmodified	_KLLEAATP_					0	0	0			REV__ENSG00000198648|ENST00000355999|STK39	REV__ENSG00000198648|ENST00000355999|STK39	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.7535400390625	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.204	1	77.295	76.795	77.795	0.091438								0	0	0	0.29344	1	7211	7211		31.955	1.4512	1		+		21928	23351	14775	14785	25273	25273					0.06383284011508294
KLLEDAPCLEL	11	Unmodified	_KLLEDAPCLEL_					0	0	0			REV__ENST00000607425.1_1_1:214163097-214169868:+|nuORF	REV__ENST00000607425.1_1_1:214163097-214169868:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.3351440429688	2	622.333764	1242.65297	2.3783	0.0014801	1.0325	0.00064255	3.4108	0.0021226	622.3342365871133	110.19	0.38945	110.24	110.14	110.52	0.054062					28	12	3	0	0	0	0.73893	1	13333	13333		24.519	0.99649	1	822300	+		21929	29388	14776	14786	25274	25274					0.04135459911503858
KLLENNARA	9	Unmodified	_KLLENNARA_					0	0	0			REV__nc|nan|Q9H972-2|C14orf93	REV__nc|nan|Q9H972-2|C14orf93	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	515.7796630859375	2	514.795998	1027.57744	1.0491	0.00054008	-0.80602	-0.00041494	0.2431	0.00012515	514.7953221991842	18.392	0.17353	18.467	18.344	18.517	0.075443					6	4	2	0	0	0	0.20789	1	283	283		14.865	0	1	19672	+		21930	17221	14777	14787	25275	25275					0.06475663566084222
KLLFASHP	8	Unmodified	_KLLFASHP_					0	0	0			REV__ENST00000396526.7_1_14:35032263-35032341:-|nuORF	REV__ENST00000396526.7_1_14:35032263-35032341:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7682189941406	2	456.76872	911.522887	0.96672	0.00044157	-3.863	-0.0017645	-2.8962	-0.0013229	456.7668840789674	16.289	0.34063	16.367	16.203	16.544	0.077959					30	14	3	0	0	0	0.85277	1	80	80		25.45	10.786	1	148700	+		21931	26145	14778	14788	25276	25276					0.06358696485324344
KLLFFISE	8	Unmodified	_KLLFFISE_					0	0	0			REV__ENST00000299638.7_2_15:58007640-58007844:+|nuORF	REV__ENST00000299638.7_2_15:58007640-58007844:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2847900390625	2	498.791861	995.569169	-0.13155	-6.5616E-05	-1.5095	-0.00075291	-1.641	-0.00081853	498.79053446016593	25.129	0.53709	24.801	24.567	25.104	-0.32825					15	11	3	0	0	0	0.4196	1	1248	1248		24.203	0	1	62740	+		21932	24742	14779	14789	25277	25277					0.07120716596750754
KLLFHLRQLLK	11	Unmodified	_KLLFHLRQLLK_					0	0	0		nc|ENSG00000170581|P52630-4|STAT2;ENSG00000170581|ENST00000314128|STAT2;ENST00000557156.1_1_12:56745011-56748252:-|nuORF	nc|ENSG00000170581|P52630-4|STAT2	nc|ENSG00000170581|P52630-4|STAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.31146240234375	3	470.309885	1407.90782	0.67382	0.0003169	2.5137	0.0011822	3.1875	0.0014991	470.3110345822015	16.507	0.35062	16.483	16.317	16.668	-0.024035					30	14	3	0	0	0	0.77205	1	151	151		17.167	4.2093	1	202990			21933	6603	14780	14790	25278	25278					0.22018734232688075
KLLFLMVLLCF	11	Carbamidomethyl (C)	_KLLFLMVLLC(Carbamidomethyl (C))F_	KLLFLMVLLC(1)F		KLLFLMVLLC(46)F		0	1	0			REV__nc|ENSG00000148053|Q16620-7|NTRK2	REV__nc|ENSG00000148053|Q16620-7|NTRK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2725830078125	3	466.274684	1395.80222	-0.72654	-0.00033877	-1.8666	-0.00087033	-2.5931	-0.0012091	466.2737750957027	69.302	0.62726	69.265	68.943	69.57	-0.036957					102	31	4	0	0	0	0.57736	2	6726	6726;6732		46.457	14.823	1	1217300	+		21934	20093	14781	14791	25279;25280	25279	253				0.12015314000564103
KLLFSQLPLSH	11	Unmodified	_KLLFSQLPLSH_					0	0	0			REV__ENSG00000090924|ENST00000425673|PLEKHG2	REV__ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8834838867188	2	641.87953	1281.74451	1.5974	0.0010254	2.9074	0.0018662	4.5048	0.0028915	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.7434	1	9956	9956		23.523	3.5259	1	4266200	+		21935	16999	14782	14792	25281	25281					0.11490511391002656
KLLFTLISAS	10	Unmodified	_KLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8399658203125	2	546.8368	1091.65905	3.386	0.0018516	1.8298	0.0010006	5.2158	0.0028522	546.8379771318001	101.02	3.777	100.97	100.36	104.13	-0.052116					284	90	6	0	0	0	0.64457	3	10966	10966;11110;11183		47.657	5.2612	1	39176000	+		21936	28273	14783	14793	25282;25283;25284	25282					0.11688346205323796
KLLFTLISAS	10	Unmodified	_KLLFTLISAS_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8399658203125	2	546.8368	1091.65905	1.265	0.00069175	4.2188	0.002307	5.4838	0.0029987	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.64457	2	10840	10816;10840		47.657	8.4045	1	39577000	+		21937	28273	14783	14793	25285;25286	25286					0.11688346205323796
KLLGCPDDYK	10	Unmodified	_KLLGCPDDYK_					0	0	0			REV__ENSG00000162621|ENST00000294635|LRRC53	REV__ENSG00000162621|ENST00000294635|LRRC53	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.7537841796875	2	576.291899	1150.56925	0.62691	0.00036128	-1.3357	-0.00076977	-0.70882	-0.00040849	576.2913289817251	97.217	0.48347	97.608	97.403	97.887	0.39065					18	11	2	0	0	0	0.37624	1	11758	11758		24.519	0	1	85863	+		21938	20829	14784	14794	25287	25287					-1.651465572649613E-05
KLLGPRLRVG	10	Unmodified	_KLLGPRLRVG_					0	0	0			REV__ENST00000530725.5_1_8:61421296-61429236:-|nuORF	REV__ENST00000530725.5_1_8:61421296-61429236:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.8693237304688	2	554.8693	1107.72405	0.57286	0.00031786	-0.40692	-0.00022579	0.16594	9.2073E-05	554.8689840832363	19.886	0.70171	19.416	19.065	19.767	-0.46967					34	14	3	0	0	0	0.85694	1	590	590		21.96	1.013	1	410780	+		21939	28288	14785	14795	25288	25288					0.17449385521831573
KLLGSLDEVLL	11	Unmodified	_KLLGSLDEVLL_					0	0	0		ENST00000426186.1_3_2:87121966-87144635:+|nuORF	ENST00000426186.1_3_2:87121966-87144635:+|nuORF	ENST00000426186.1_3_2:87121966-87144635:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.5793762207031	3	400.579706	1198.71729	2.7176	0.0010886	-0.65151	-0.00026098	2.0661	0.00082764	400.57928348734663	112.87	0.76526	112.84	112.7	113.46	-0.024811					36	18	3	0	0	0	0.74405	1	12461	12461		23.378	2.5408	1	3158500			21940	11546	14786	14796	25289	25289					0.1258798305993878
KLLHEKQTT	9	Unmodified	_KLLHEKQTT_					0	0	0			REV__ENSG00000071127|ENST00000499869|WDR1	REV__ENSG00000071127|ENST00000499869|WDR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3176879882812	2	549.319306	1096.62406	0.85078	0.00046735	-3.9097	-0.0021477	-3.0589	-0.0016803	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.7932	1	10567	10567		24.519	1.4767	1	2023500	+		21941	16621	14787	14797	25290	25290					0.0796110339738334
KLLIPVMGK	9	Unmodified	_KLLIPVMGK_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|5|1|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.82208251953125	2	499.825181	997.635809	1.0233	0.00051145	3.4185	0.0017087	4.4418	0.0022201	499.8266355697786	19.569	0.38315	19.641	19.479	19.862	0.071129					31	13	3	0	0	0	0.7932	1	406	406		24.203	0	1	67609	+		21942	29553	14788	14798	25291	25291					0.136896288870048
KLLKEHATN	9	Unmodified	_KLLKEHATN_					0	0	0		ENSG00000138587|ENST00000260453|MNS1	ENSG00000138587|ENST00000260453|MNS1	ENSG00000138587|ENST00000260453|MNS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3048706054688	2	527.306198	1052.59784	-0.62415	-0.00032912	-2.1989	-0.0011595	-2.8231	-0.0014886	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.77244	1	10080	10080		32.812	2.4947	1	949980			21943	4301	14789	14799	25292	25292					0.07364834225904815
KLLKISGIILK	11	Unmodified	_KLLKISGIILK_					0	0	0		ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.2923583984375	3	409.29172	1224.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.363	1	19.903	19.403	20.403	-0.4591								0	0	0	0.56276	1	636	636		13.508	2.4112	1				21944	4717	14790	14800	25293	25293					0.24989722361260647
KLLKKCAQCV	10	Unmodified	_KLLKKCAQCV_					0	0	0			REV__nc|ENSG00000105287|Q9BZL6-2|PRKD2	REV__nc|ENSG00000105287|Q9BZL6-2|PRKD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3302001953125	2	567.330304	1132.64606	-0.54401	-0.00030863	0.14365	8.1497E-05	-0.40036	-0.00022714	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.8488	1	8894	8894		17.365	0.89182	1	4477200	+		21945	17523	14791	14801	25294	25294					0.08503868549928484
KLLKKFKSRK	10	Unmodified	_KLLKKFKSRK_					0	0	0			REV__nc|ENSG00000006377|P56179|DLX6	REV__nc|ENSG00000006377|P56179|DLX6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.6308898925781	3	425.958963	1274.85506	-0.18665	-7.9503E-05	0.96235	0.00040992	0.77571	0.00033042	425.9589590520234	83.029	1.2386	83.46	82.591	83.83	0.43108					55	29	2	0	0	0	0.37624	1	9521	9521		10.587	6.7434	1	280470	+		21946	16100	14792	14802	25295	25295					0.22862776169881727
KLLKRETVV	9	Unmodified	_KLLKRETVV_					0	0	0			REV__ENSG00000116996|ENST00000366570|ZP4	REV__ENSG00000116996|ENST00000366570|ZP4	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	543.3549194335938	2	543.355691	1084.69683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.129	1	24.188	23.688	24.688	0.058167								0	0	0	0.33676	1	816	816		18.324	0.95945	1		+		21947	18240	14793	14803	25296	25296					0.1578685719080113
KLLKVSIHRNI	11	Unmodified	_KLLKVSIHRNI_					0	0	0			REV__L1MB8_dup11124|chr11:76501228-76502194:+|1.1891599064355265|0.2630071558196101|2.18|63.0|18|2|sense	REV__L1MB8_dup11124|chr11:76501228-76502194:+|1.1891599064355265|0.2630071558196101|2.18|63.0|18|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25567626953125	3	440.95399	1319.84014	-0.57123	-0.00025188	-3.8441	-0.0016951	-4.4154	-0.001947	440.9521305261272	64.865	1.0705	65.251	64.567	65.637	0.38615					38	25	2	0	0	0	0.17955	1	6928	6928		5.4129	0	1	81718	+		21948	29527	14794	14804	25297	25297					0.19301284301877786
KLLLHHSF	8	Unmodified	_KLLLHHSF_					0	0	0		ENST00000367505.6_1_6:146239283-146239340:-|nuORF	ENST00000367505.6_1_6:146239283-146239340:-|nuORF	ENST00000367505.6_1_6:146239283-146239340:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.7953186035156	2	497.795269	993.575986	0.12484	6.2144E-05	1.1746	0.00058469	1.2994	0.00064683	497.7955900071464	48.374	0.68279	48.369	47.966	48.649	-0.0056381					42	15	3	0	0	0	0.90465	1	4024	4024		40.573	7.057	1	381930			21949	10550	14795	14805	25298	25298					0.07894074267983342
KLLLHYSDK	9	Unmodified	_KLLLHYSDK_					0	0	0		ENST00000280200.8_3_18:67530286-67530424:-|nuORF	ENST00000280200.8_3_18:67530286-67530424:-|nuORF	ENST00000280200.8_3_18:67530286-67530424:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	559.29541015625	2	558.824224	1115.63389	0.80403	0.00044931	-0.24111	-0.00013474	0.56292	0.00031457	559.3238424433135	94.546	0.25122	94.709	94.575	94.826	0.16307					8	5	2	0	0	0	0.20789	1	9659	9659		29.15	14.285	1	24787			21950	9617	14796	14806	25299	25299					0.08070291402736984
KLLLLPSP	8	Unmodified	_KLLLLPSP_					0	0	0		ENST00000526185.5_1_11:47197353-47198404:-|nuORF	ENST00000526185.5_1_11:47197353-47198404:-|nuORF	ENST00000526185.5_1_11:47197353-47198404:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25543212890625	2	440.796946	879.57934	-0.80212	-0.00035357	-2.7258	-0.0012015	-3.528	-0.0015551	440.79572586319046	56.22	1.0886	56.616	56.449	57.537	0.39672					41	26	2	0	0	0	0.4196	1	5858	5858		19.36	4.6959	1	502880			21951	13255	14797	14807	25300	25300					0.1347332432198982
KLLLLTPE	8	Unmodified	_KLLLLTPE_					0	0	0		nc|ENSG00000161270|O60500-2|NPHS1;ENSG00000161270|ENST00000378910|NPHS1	nc|ENSG00000161270|O60500-2|NPHS1	nc|ENSG00000161270|O60500-2|NPHS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7996826171875	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.87479	1	3736	3736		30.504	0	1	5050800			21952	5631	14798	14808	25301	25301					0.119050031137931
KLLLPTPLL	9	Unmodified	_KLLLPTPLL_					0	0	0		nc|ENSG00000105520|Q96GM1-2|PLPPR2;ENSG00000105520|ENST00000688289|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3450927734375	2	504.346803	1006.67905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.769	1	53.192	52.692	53.692	0.42348								0	0	0	0.30053	1	5300	5300		30.504	5.0535	1				21953	2223	14799	14809	25302	25302					0.17598141935934564
KLLLPTPLL	9	Unmodified	_KLLLPTPLL_					0	0	0		nc|ENSG00000105520|Q96GM1-2|PLPPR2;ENSG00000105520|ENST00000688289|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3444519042969	2	504.346803	1006.67905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.002	1	53.416	52.916	53.916	0.4139								0	0	0	0.34024	1	5334	5334		17.365	0.89182	1				21954	2223	14799	14809	25303	25303					0.17598141935934564
KLLLPTPLL	9	Unmodified	_KLLLPTPLL_					0	0	0		nc|ENSG00000105520|Q96GM1-2|PLPPR2;ENSG00000105520|ENST00000688289|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.27392578125	2	504.346803	1006.67905	-0.3791	-0.0001912	-2.7831	-0.0014036	-3.1622	-0.0015948	504.34531769983755	85.389	1.0248	85.828	85.502	86.527	0.43967					32	24	2	0	0	0	0.20789	1	10004	10004		12.207	0	1	124560			21955	2223	14799	14809	25304	25304					0.17598141935934564
KLLLPTPLL	9	Unmodified	_KLLLPTPLL_					0	0	0		nc|ENSG00000105520|Q96GM1-2|PLPPR2;ENSG00000105520|ENST00000688289|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3460693359375	2	504.346803	1006.67905	0.5395	0.00027209	-1.2865	-0.00064886	-0.74703	-0.00037676	504.3448506264481	52.564	2.2272	53.179	51.801	54.028	0.61436					96	53	3	0	0	0	0.78983	1	5373	5373		27.882	1.0861	1	616280			21956	2223	14799	14809	25305	25305					0.17598141935934564
KLLLTLPLL	9	Unmodified	_KLLLTLPLL_					0	0	0		nc|ENSG00000119715|O95718|ESRRB;ENSG00000119715|ENST00000644823|ESRRB;nc|ENSG00000119715|O95718-2|ESRRB;chr14:76498912-76499863|13|12.92|0.23|5.82|+|ENST00000505752|ESRRB,ESRRB;nc|ENSG00000119715|O95718-1|ESRRB;chr14:76500066-76500695|19|27.0|0.8|5.07|+|ENST00000509242|ESRRB,ESRRB	nc|ENSG00000119715|O95718|ESRRB	nc|ENSG00000119715|O95718|ESRRB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.360595703125	2	512.362453	1022.71035	-0.13841	-7.0915E-05	-2.2699	-0.001163	-2.4083	-0.0012339	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.7932	2	7300	7300;7329		15.642	2.6826	1	293160			21957	178	14800	14810	25306;25307	25306					0.1999071497003797
KLLLVGNL	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KLLLVGNL_					1	0	0		ENST00000356218.8_1_14:51955989-52156529:+|nuORF;ENST00000554745.1_1_14:52037087-52110185:+|nuORF;ENST00000555952.5_1_14:52037087-52045744:+|nuORF;ENST00000557001.5_1_14:52037087-52042616:+|nuORF	ENST00000356218.8_1_14:51955989-52156529:+|nuORF	ENST00000356218.8_1_14:51955989-52156529:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3016357421875	2	456.299853	910.585153	-0.11111	-5.0701E-05	2.9884	0.0013636	2.8773	0.0013129	456.3010566410468	35.268	1.48	35.256	34.768	36.248	-0.012203					106	34	4	0	0	0	0.92457	1	2260	2260		47.916	12.715	1	794600			21958	10360	14801	14811	25308	25308					0.12628422833643071
KLLMGQKIPIA	11	Unmodified	_KLLMGQKIPIA_					0	0	0			REV__ENSG00000157985|ENST00000304032|AGAP1;REV__nc|ENSG00000204172|Q5VTM2|AGAP9;REV__nc|ENSG00000264204|Q5VUJ5|AGAP7P	REV__nc|ENSG00000204172|Q5VTM2|AGAP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.923828125	3	404.58966	1210.74715	1.2344	0.00049943	-3.4351	-0.0013898	-2.2007	-0.00089038	404.5881712722995	41.372	1.4334	41.378	40.604	42.037	0.0065727					70	37	2	0	0	0	0.73621	1	3011	3011		25.126	0.89417	1	244970	+		21959	30158;30254;20575	14802	14812	25309	25309					0.1502064352432626
KLLNKRIDEL	10	Unmodified	_KLLNKRIDEL_					0	0	0			REV__nc|ENSG00000100084|P54198-2|HIRA	REV__nc|ENSG00000100084|P54198-2|HIRA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.59124755859375	3	414.590717	1240.75032	0.73309	0.00030393	0.82463	0.00034188	1.5577	0.00064582	414.5908881291252	32.401	0.76654	32.508	32.189	32.956	0.10707					47	17	4	0	0	0	0.69342	1	2263	2263		45.022	11.101	1	854600	+		21960	17135	14803	14813	25310	25310					0.13957609902649892
KLLNLSHS	8	Unmodified	_KLLNLSHS_					0	0	0		nc|ENSG00000254838|Q7Z2Y8|GVINP1	nc|ENSG00000254838|Q7Z2Y8|GVINP1	nc|ENSG00000254838|Q7Z2Y8|GVINP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.2694396972656	2	456.269084	910.523616	-1.2298	-0.00056112	1.3658	0.00062319	0.13603	6.2066E-05	456.26955386041453	27.778	1.0533	27.681	27.36	28.413	-0.096945					55	24	3	0	0	0	0.79403	1	1620	1620		63.306	0	1	414790			21961	15293	14804	14814	25311	25311					0.06477491134376123
KLLNYAPLEK	10	Unmodified	_KLLNYAPLEK_					0	0	0		ENSG00000177700|ENST00000322028|POLR2L	ENSG00000177700|ENST00000322028|POLR2L	ENSG00000177700|ENST00000322028|POLR2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.8524169921875	2	594.852981	1187.69141	-0.64844	-0.00038573	0.47674	0.00028359	-0.1717	-0.00010214	594.8531383612473	45.556	0.77293	46.028	45.684	46.457	0.47139					54	18	4	0	0	0	9.597700000000001E-33	4	4243	4223;4234;4243;4255		186.41	55.379	1	4203700			21962	7159	14805	14815	25312;25313;25314;25315	25314					0.10507133608325603
KLLNYAPLEK	10	Unmodified	_KLLNYAPLEK_					0	0	0		ENSG00000177700|ENST00000322028|POLR2L	ENSG00000177700|ENST00000322028|POLR2L	ENSG00000177700|ENST00000322028|POLR2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.8526611328125	2	594.852981	1187.69141	-0.73019	-0.00043435	0.41576	0.00024732	-0.31443	-0.00018704	594.8530993815245	45.391	0.80033	46.286	46.005	46.805	0.89542					53	19	4	0	0	0	1.223E-11	4	4237	4215;4226;4237;4253		164.46	54.977	1	4582400			21963	7159	14805	14815	25316;25317;25318;25319	25318					0.10507133608325603
KLLPDLPAV	9	Unmodified	_KLLPDLPAV_					0	0	0			REV__ENST00000393088.8_1_14:94854902-94855150:-|nuORF	REV__ENST00000393088.8_1_14:94854902-94855150:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.2375793457031	2	483.305136	964.595718	-2.8828	-0.0013933	-2.5537	-0.0012342	-5.4365	-0.0026275	483.30360312518593	39.869	0.12752	39.878	39.815	39.943	0.0092773					4	2	2	0	0	0	0.20789	1	2825	2825		24.203	0	1	33479	+		21964	26046	14806	14816	25320	25320					0.11200405488068554
KLLPQLTY	8	Unmodified	_KLLPQLTY_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ENST00000486769.1_1_9:100760930-100767440:+|nuORF;ENST00000483551.6_1_15:69072422-69081590:-|nuORF;ENSG00000140350|ENST00000465139|ANP32A	nc|ENSG00000136938|Q92688-2|ANP32B	nc|ENSG00000136938|Q92688-2|ANP32B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.2008361816406	2	488.29731	974.580068	-0.26253	-0.00012819	-0.30284	-0.00014788	-0.56537	-0.00027607	488.29683850986527	54.935	2.1773	55.503	53.856	56.033	0.56836					81	51	3	0	0	0	0.4196	1	5485	5485		30.504	6.3009	1	588130			21965	4163	14807	14817	25321	25321					0.09176118971026881
KLLPSVVLK	9	Unmodified	_KLLPSVVLK_					0	0	0		ENSG00000113070|ENST00000230990|HBEGF	ENSG00000113070|ENST00000230990|HBEGF	ENSG00000113070|ENST00000230990|HBEGF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.843994140625	2	498.844428	995.674303	-1.5425	-0.00076949	0.94452	0.00047117	-0.59803	-0.00029832	498.84477599355114	48.016	1.142	48.485	47.971	49.113	0.46941					86	28	5	0	0	0	2.4207E-08	6	4614	4580;4591;4601;4614;4626;4652		158.07	66.364	1	6811700			21966	2695	14808	14818	25322;25323;25324;25325;25326;25327	25325					0.17629257793180386
KLLPSVVLK	9	Unmodified	_KLLPSVVLK_					0	0	0		ENSG00000113070|ENST00000230990|HBEGF	ENSG00000113070|ENST00000230990|HBEGF	ENSG00000113070|ENST00000230990|HBEGF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.8440856933594	2	498.844428	995.674303	-0.58934	-0.00029399	0.043385	2.1642E-05	-0.54596	-0.00027235	498.84434366441735	47.828	1.1524	48.751	48.356	49.508	0.92315					74	28	4	0	0	0	0.002448	6	4603	4570;4580;4591;4603;4617;4630		141.52	47.693	1	6939600			21967	2695	14808	14818	25328;25329;25330;25331;25332;25333	25331					0.17629257793180386
KLLPVGNSTNV	11	Unmodified	_KLLPVGNSTNV_					0	0	0		chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.3304443359375	2	571.332413	1140.65027	-1.3827	-0.00078998	-1.153	-0.00065874	-2.5357	-0.0014487	571.3317717910289	102.19	3.5699	102.32	101.59	105.16	0.1357					156	88	4	0	0	0	0.69995	1	10670	10670		31.53	10.583	1	3715400			21968	323	14809	14819	25334	25334					0.08557372568861865
KLLPVLDP	8	Unmodified	_KLLPVLDP_					0	0	0		ENSG00000132259|ENST00000379936|CNGA4	ENSG00000132259|ENST00000379936|CNGA4	ENSG00000132259|ENST00000379936|CNGA4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.7735900878906	2	447.786579	893.558604	-1.3908	-0.00062279	2.3742	0.0010631	0.98338	0.00044034	447.7875556506019	41.167	2.3296	41.171	40.194	42.524	0.0043983					120	73	2	0	0	0	0.4196	1	2649	2649		1.0954	0	1	844040			21969	3773	14810	14820	25335	25335					0.1075673394233263
KLLPYVLEKG	10	Unmodified	_KLLPYVLEKG_					0	0	0		ENSG00000163083|ENST00000295228|INHBB	ENSG00000163083|ENST00000295228|INHBB	ENSG00000163083|ENST00000295228|INHBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.355224609375	2	580.357899	1158.70125	-0.33893	-0.0001967	-3.1032	-0.001801	-3.4421	-0.0019977	580.3559756661498	21.173	0.6302	20.714	20.461	21.091	-0.4591					22	14	2	0	0	0	0.8545	1	749	749		36.447	2.2742	1	101510			21970	5764	14811	14821	25336	25336					0.12824321613697975
KLLPYVLEKG	10	Unmodified	_KLLPYVLEKG_					0	0	0		ENSG00000163083|ENST00000295228|INHBB	ENSG00000163083|ENST00000295228|INHBB	ENSG00000163083|ENST00000295228|INHBB	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	580.357899	1158.70125	-0.69551	-0.00040365	-2.9852	-0.0017325	-3.6807	-0.0021361	580.3562189843885	21.41	0.46854	20.782	20.586	21.054	-0.62835	0.033977	8.8754E-05	NaN	36.447	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100520			21971	5764	14811	14821							0.12824321613697975
KLLQAARSLPK	11	Unmodified	_KLLQAARSLPK_					0	0	0		ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.9316711425781	3	408.931073	1223.77139	0.24155	9.8775E-05	0.64037	0.00026187	0.88191	0.00036064	408.93107439761843	28.345	0.78642	28.248	27.796	28.582	-0.096945					38	18	4	0	0	0	0.71803	1	1701	1701		28.577	3.4507	1	256810			21972	1116	14812	14822	25337	25337					0.16845620002163741
KLLQADSH	8	Unmodified	_KLLQADSH_					0	0	0		ENSG00000138642|ENST00000264346|HERC6	ENSG00000138642|ENST00000264346|HERC6	ENSG00000138642|ENST00000264346|HERC6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7917175292969	2	456.250892	910.48723	-1.2327	-0.00056243	1.9019	0.00086773	0.66917	0.00030531	456.25242841173605	52.136	1.2003	52.177	51.951	53.151	0.040596					61	37	3	0	0	0	0.4196	1	4163	4163		21.96	3.6355	1	142150			21973	4311	14813	14823	25338	25338					0.028406142376638854
KLLQLFFFLP	10	Unmodified	_KLLQLFFFLP_					0	0	0			REV__nc|ENSG00000289746|A2JGV3|TRGC1	REV__nc|ENSG00000289746|A2JGV3|TRGC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5926818847656	3	422.593399	1264.75837	-0.12961	-5.4774E-05	-0.55391	-0.00023408	-0.68353	-0.00028885	422.59301325163335	54.438	1.5298	54.43	53.553	55.082	-0.0077057					142	48	4	0	0	0	0.88106	1	4876	4876		12.207	0	1	1173800	+		21974	30292	14814	14824	25339	25339					0.13657788890077427
KLLQLKNFN	9	Unmodified	_KLLQLKNFN_					0	0	0		nc|ENSG00000152689|Q8IV61-2|RASGRP3;ENSG00000152689|ENST00000403687|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.3613891601562	2	559.340041	1116.66553	0.014581	8.1555E-06	-1.0075	-0.00056351	-0.99288	-0.00055536	559.3392609188538	79.919	1.0585	80.456	79.944	81.003	0.53701					47	24	3	0	0	0	0.20789	1	9161	9161		45.952	5.3793	1	272500			21975	5194	14815	14825	25340	25340					0.11186284156701731
KLLQQMEPKW	10	Unmodified	_KLLQQMEPKW_					0	0	0			REV__nc|ENSG00000133318|O95197-5|RTN3	REV__nc|ENSG00000133318|O95197-5|RTN3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2356262207031	3	434.240919	1299.70093	0.079885	3.4689E-05	-1.5268	-0.00066299	-1.4469	-0.0006283	434.2410795545511	28.045	0.21002	28.156	28.049	28.259	0.11117					11	10	2	0	0	0	0.37624	1	1146	1146		20.03	4.693	1	34243	+		21976	29853	14816	14826	25341	25341					0.06306578622206871
KLLRAAGHLVR	11	Unmodified	_KLLRAAGHLVR_					0	0	0		ENSG00000123453|ENST00000439388|SARDH;nc|ENSG00000123453|Q9UL12-2|SARDH	ENSG00000123453|ENST00000439388|SARDH	ENSG00000123453|ENST00000439388|SARDH	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	617.4005126953125	2	617.398756	1232.78296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.439	1	15.488	14.988	15.988	0.04908								0	0	0	0.56276	1	47	47		18.262	1.7889	1				21977	3273	14817	14827	25342	25342					0.17587861816150507
KLLRHKRKH	9	Unmodified	_KLLRHKRKH_					0	0	0		ENSG00000198205|ENST00000358697|ZXDA;ENSG00000198455|ENST00000374888|ZXDB	ENSG00000198205|ENST00000358697|ZXDA	ENSG00000198205|ENST00000358697|ZXDA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.89898681640625	3	405.935152	1214.78363	0.3917	0.00015901	-2.2892	-0.00092929	-1.8975	-0.00077028	406.2685399955818	62.718	0.70064	62.839	62.631	63.332	0.1209					36	31	2	0	0	0	0.20789	1	5504	5504		12.207	3.7994	1	178500			21978	8254	14818	14828	25343	25343					0.18482701255879874
KLLRHKRKH	9	Unmodified	_KLLRHKRKH_					0	0	0		ENSG00000198205|ENST00000358697|ZXDA;ENSG00000198455|ENST00000374888|ZXDB	ENSG00000198205|ENST00000358697|ZXDA	ENSG00000198205|ENST00000358697|ZXDA	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	405.935152	1214.78363	-1.8611	-0.0007555	-2.4369	-0.00098923	-4.2981	-0.0017447	405.93397223710923	62.54	0.47248	62.654	62.268	62.74	0.11389	-0.092603	-0.00010942	NaN	12.207	34	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	201240			21979	8254	14818	14828							0.18482701255879874
KLLRKENLDL	10	Unmodified	_KLLRKENLDL_					0	0	0		ENSG00000078142|ENST00000262039|PIK3C3	ENSG00000078142|ENST00000262039|PIK3C3	ENSG00000078142|ENST00000262039|PIK3C3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.59124755859375	3	414.590717	1240.75032	0.73309	0.00030393	0.82463	0.00034188	1.5577	0.00064582	414.5908881291252	32.401	0.76654	32.508	32.189	32.956	0.10707					47	17	4	0	0	0	0.76096	1	2288	2288		41.427	3.6151	1	854600			21980	1392	14819	14829	25344	25344					0.13957609902649892
KLLSKRST	8	Unmodified	_KLLSKRST_					0	0	0			REV__ENSG00000133640|ENST00000393217|LRRIQ1	REV__ENSG00000133640|ENST00000393217|LRRIQ1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.7973327636719	2	466.798009	931.581465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.876	1	19.247	18.747	19.747	-0.6296								0	0	0	0.30079	1	578	578		20.947	4.4738	1		+		21981	19087	14820	14830	25345	25345					0.11293753059806022
KLLSKVPLV	9	Unmodified	_KLLSKVPLV_					0	0	0			REV__nc|ENSG00000151148|Q7Z3V4-2|UBE3B	REV__nc|ENSG00000151148|Q7Z3V4-2|UBE3B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.8439025878906	2	498.844428	995.674303	-1.5425	-0.00076949	0.94452	0.00047117	-0.59803	-0.00029832	498.84477599355114	48.016	1.142	48.485	47.971	49.113	0.46941					86	28	5	0	0	0	0.14386	1	4640	4640		84.916	2.675	1	6811700	+		21982	20238	14821	14831	25346	25346					0.17629257793180386
KLLSLLPE	8	Unmodified	_KLLSLLPE_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B;ENSG00000121892|ENST00000303538|PDS5A	nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000121892|ENST00000303538|PDS5A	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79052734375	2	456.791861	911.569169	0.2225	0.00010163	1.2501	0.00057106	1.4726	0.00067269	456.79228647464913	41.052	1.411	41.126	40.545	41.956	0.073418					84	43	2	0	0	0	0.85277	1	2700	2700		25.45	0	1	319050			21983	1504;3199	14822	14832	25347	25347					0.10984716596749422
KLLSVRLCPPV	11	Unmodified	_KLLSVRLCPPV_					0	0	0		ENST00000562801.5_1_16:46950457-46962906:+|nuORF;nc|ENSG00000166123|Q8TD30-2|GPT2;ENSG00000166123|ENST00000340124|GPT2	ENST00000562801.5_1_16:46950457-46962906:+|nuORF	ENST00000562801.5_1_16:46950457-46962906:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.9222717285156	3	408.921409	1223.7424	3.1807	0.0013007	-1.0639	-0.00043504	2.1168	0.00086562	408.92095568616344	104.57	4.1233	104.61	103.07	107.19	0.039856					288	98	5	0	0	0	0.72918	1	11431	11431		23.378	5.9099	1	4230400			21984	6156	14823	14833	25348	25348					0.13947759381517244
KLLTAAELLLD	11	Unmodified	_KLLTAAELLLD_					0	0	0		ENSG00000122122|ENST00000356892|SASH3	ENSG00000122122|ENST00000356892|SASH3	ENSG00000122122|ENST00000356892|SASH3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.5801696777344	3	400.579706	1198.71729	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.55	1	114.61	114.11	115.11	0.061073								0	0	0	0.56276	1	12244	12244		20.315	1.784	1				21985	3210	14824	14834	25349	25349					0.1258798305993878
KLLTAAELLLD	11	Unmodified	_KLLTAAELLLD_					0	0	0		ENSG00000122122|ENST00000356892|SASH3	ENSG00000122122|ENST00000356892|SASH3	ENSG00000122122|ENST00000356892|SASH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.57989501953125	3	400.579706	1198.71729	3.4037	0.0013634	-1.2228	-0.00048981	2.1809	0.00087364	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.77205	1	13765	13765		17.167	0.63689	1	5321000			21986	3210	14824	14834	25350	25350					0.1258798305993878
KLLTFLLWYL	10	Unmodified	_KLLTFLLWYL_					0	0	0		ENSG00000125965|ENST00000374369|GDF5	ENSG00000125965|ENST00000374369|GDF5	ENSG00000125965|ENST00000374369|GDF5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.267822265625	3	437.268804	1308.78458	-0.73822	-0.0003228	-1.4092	-0.00061619	-2.1474	-0.00093899	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.86409	1	4587	4587		25.126	2.5644	1	3639500			21987	3430	14825	14835	25351	25351					0.1425405806157869
KLLTFLLWYL	10	Unmodified	_KLLTFLLWYL_					0	0	0		ENSG00000125965|ENST00000374369|GDF5	ENSG00000125965|ENST00000374369|GDF5	ENSG00000125965|ENST00000374369|GDF5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.267822265625	3	437.268804	1308.78458	-1.5693	-0.00068621	-0.73562	-0.00032167	-2.3049	-0.0010079	437.2683683670783	53.718	2.085	53.765	52.872	54.957	0.047806					225	71	5	0	0	0	0.8492	2	4412	4412;4441		26.75	6.4347	1	2544700			21988	3430	14825	14835	25352;25353	25352					0.1425405806157869
KLLTFLLWYL	10	Unmodified	_KLLTFLLWYL_					0	0	0		ENSG00000125965|ENST00000374369|GDF5	ENSG00000125965|ENST00000374369|GDF5	ENSG00000125965|ENST00000374369|GDF5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2679748535156	3	437.268804	1308.78458	0.29718	0.00012995	-2.3878	-0.0010441	-2.0906	-0.00091417	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.8492	1	4140	4140		18.531	0.69791	1	4533800			21989	3430	14825	14835	25354	25354					0.1425405806157869
KLLTFLLWYL	10	Unmodified	_KLLTFLLWYL_					0	0	0		ENSG00000125965|ENST00000374369|GDF5	ENSG00000125965|ENST00000374369|GDF5	ENSG00000125965|ENST00000374369|GDF5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26763916015625	3	437.268804	1308.78458	0.78043	0.00034126	-3.1677	-0.0013851	-2.3873	-0.0010439	437.26733211231357	49.246	1.5472	50.15	49.725	51.272	0.90424					125	37	5	0	0	0	0.85259	1	4807	4807		20.03	1.4994	1	5667400			21990	3430	14825	14835	25355	25355					0.1425405806157869
KLLTSATK	8	Unmodified	_KLLTSATK_					0	0	0			REV__ENSG00000164880|ENST00000404767|INTS1	REV__ENSG00000164880|ENST00000404767|INTS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.5128479003906	2	431.273835	860.533118	1.1025	0.00047547	-0.50557	-0.00021804	0.59692	0.00025744	431.2734725784606	23.077	1.4852	22.503	22.026	23.512	-0.57415					90	35	3	0	0	0	0.4196	1	939	939		11.511	0	1	389990	+		21991	21124	14826	14836	25356	25356					0.09727259419889833
KLLVALPRHGG	11	Unmodified	_KLLVALPRHGG_					0	0	0			REV__ENST00000377298.8_1_1:9789653-9789887:-|nuORF	REV__ENST00000377298.8_1_1:9789653-9789887:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8670043945312	2	580.866757	1159.71896	-0.68716	-0.00039915	-0.31119	-0.00018076	-0.99836	-0.00057991	580.8664418786329	78.579	1.3049	79.142	78.537	79.842	0.56332					71	30	3	0	0	0	0.76322	1	8994	8994		19.104	0	1	1961100	+		21992	25864	14827	14837	25357	25357					0.14549081659197327
KLLVDLLGP	9	Unmodified	_KLLVDLLGP_					0	0	0			REV__nc|ENSG00000184058|O43435-2|TBX1	REV__nc|ENSG00000184058|O43435-2|TBX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7102355957031	2	484.312961	966.611368	-1.4926	-0.00072291	0.91195	0.00044167	-0.58069	-0.00028123	484.3132179598258	88.585	0.35913	89.055	88.836	89.195	0.47068					12	8	2	0	0	0	0.20789	1	10470	10470		40.778	18.818	1	54212	+		21993	30092	14828	14838	25358	25358					0.1267269200515102
KLLVMHRSH	9	Unmodified	_KLLVMHRSH_					0	0	0			REV__ENST00000300935.7_1_19:16243690-16243978:+|nuORF	REV__ENST00000300935.7_1_19:16243690-16243978:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.8262329101562	2	560.824035	1119.63352	0.31128	0.00017458	3.5868	0.0020115	3.898	0.0021861	560.8258290332603	50.891	0.60448	50.923	50.638	51.243	0.032314					47	18	3	0	0	0	0.76764	1	4026	4026		34.173	5.023	1	550950	+		21994	24758	14829	14839	25359	25359					0.07848593201924814
KLLVYLRIDF	10	Unmodified	_KLLVYLRIDF_					0	0	0			REV__ENST00000474723.5_1_9:124736354-124752043:-|nuORF	REV__ENST00000474723.5_1_9:124736354-124752043:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3841552734375	2	640.392273	1278.76999	0.51396	0.00032914	0.37788	0.00024199	0.89184	0.00057113	640.3923882876153	53.544	0.83096	53.626	53.252	54.083	0.081524					35	21	2	0	0	0	0.86444	1	4361	4361		14.865	1.4108	1	183090	+		21995	22082	14830	14840	25360	25360					0.14175985913379918
KLMKTFSVTVQ	11	Unmodified	_KLMKTFSVTVQ_					0	0	0			REV__ENSG00000231192|ENST00000641874|OR5H1	REV__ENSG00000231192|ENST00000641874|OR5H1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.3843994140625	2	641.365398	1280.71624	1.7308	0.0011101	-0.37965	-0.00024349	1.3511	0.00086657	641.3647219869481	102.65	0.25325	102.88	102.7	102.95	0.22556					15	7	3	0	0	0	0.17415	1	12451	12451		33.922	0	1	680530	+		21996	23760	14831	14841	25361	25361					0.087114454193852
KLMLEWQFQK	10	Unmodified	_KLMLEWQFQK_					0	0	0		nc|ENSG00000130396|P55196-6|AFDN;nc|ENSG00000130396|P55196-2|AFDN;nc|ENSG00000130396|P55196-3|AFDN;nc|ENSG00000130396|P55196-1|AFDN;nc|ENSG00000130396|P55196|AFDN;ENSG00000130396|ENST00000683244|AFDN;nc|ENSG00000130396|P55196-5|AFDN	nc|ENSG00000130396|P55196-6|AFDN	nc|ENSG00000130396|P55196-6|AFDN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.76080322265625	3	450.912803	1349.71658	1.4254	0.00064274	0.83377	0.00037596	2.2592	0.0010187	450.91291227335086	36.463	0.53441	36.903	36.786	37.321	0.44043					18	12	2	0	0	0	0.37624	1	2919	2919		29.551	6.9892	1	77441			21997	14905	14832	14842	25362	25362					0.05570865139225134
KLMRKDPVF	9	Unmodified	_KLMRKDPVF_					0	0	0		nc|ENSG00000154258|Q8IUA7-4|ABCA9;nc|ENSG00000154258|Q8IUA7-3|ABCA9;ENSG00000154258|ENST00000340001|ABCA9	nc|ENSG00000154258|Q8IUA7-4|ABCA9	nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.330078125	2	567.328619	1132.64269	1.492	0.00084643	0.85585	0.00048555	2.3478	0.001332	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.72402	1	9421	9421		38.806	8.4884	1	5346500			21998	5267	14833	14843	25363	25363					0.08166941767581193
KLMTYRVY	8	Unmodified	_KLMTYRVY_					0	0	0			REV__ENST00000508447.1_1_5:96507042-96508891:-|nuORF	REV__ENST00000508447.1_1_5:96507042-96508891:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.313720703125	2	537.294245	1072.57394	-0.010345	-5.5582E-06	3.0554	0.0016417	3.0451	0.0016361	537.2953155648818	49.129	0.60647	50.033	49.686	50.292	0.90424					23	14	2	0	0	0	0.4196	1	4821	4821		24.203	0	1	261870	+		21999	27926	14834	14844	25364	25364					0.04055277467887208
KLNELKGKLR	10	Unmodified	_KLNELKGKLR_					0	0	0		ENST00000265044.6_1_3:156260720-156260924:-|nuORF	ENST00000265044.6_1_3:156260720-156260924:-|nuORF	ENST00000265044.6_1_3:156260720-156260924:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.2574462890625	3	400.25919	1197.75574	0.012697	5.082E-06	-3.4433	-0.0013782	-3.4306	-0.0013731	400.2575969939214	15.439	0.19433	15.496	15.389	15.583	0.057872					14	6	3	0	0	0	0.85692	1	38	38		36.318	17.055	1	71382			22000	9493	14835	14845	25365	25365					0.16477333485136114
KLNEWLGNENT	11	Unmodified	_KLNEWLGNENT_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1;ENST00000520550.1_1_5:67588878-67591317:+|nuORF;nc|ENSG00000145675|P27986-5|PIK3R1;nc|ENSG00000145675|P27986-3|PIK3R1;nc|ENSG00000145675|P27986-2|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.8855895996094	3	439.88597	1316.63608	-0.32244	-0.00014184	0.4441	0.00019536	0.12167	5.352E-05	439.8861485081008	32.569	1.5036	32.515	32.104	33.608	-0.05434					106	35	5	0	0	0	0.74771	1	1971	1971		22.562	0.78116	1	1366300			22001	4782	14836	14846	25366	25366					-0.009573246500849564
KLNFWLIFL	9	Unmodified	_KLNFWLIFL_					0	0	0			REV__ENSG00000181001|ENST00000641645|OR52N1	REV__ENSG00000181001|ENST00000641645|OR52N1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.358642578125	2	597.357702	1192.70085	-0.24184	-0.00014447	0.9447	0.00056433	0.70286	0.00041986	597.3578636523395	100.56	3.0718	100.56	99.06	102.13	0					172	73	4	0	0	0	0.7932	1	10193	10193		25.45	0.93098	1	2923800	+		22002	22433	14837	14847	25367	25367					0.11220946684488808
KLNGLALA	8	Unmodified	_KLNGLALA_					0	0	0			REV__ENSG00000091138|ENST00000340010|SLC26A3	REV__ENSG00000091138|ENST00000340010|SLC26A3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2536315917969	2	400.255446	798.496338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.757	1	15.733	15.233	16.233	-0.024035								0	0	0	0.29353	1	71	71		28.254	1.4582	1		+		22003	17008	14838	14848	25368	25368					0.08903007593971779
KLNGTITTP	9	Unmodified	_KLNGTITTP_					0	0	0		ENSG00000038295|ENST00000061240|TLL1	ENSG00000038295|ENST00000061240|TLL1	ENSG00000038295|ENST00000061240|TLL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7752685546875	2	472.7742	943.533846	0.76275	0.00036061	0.37727	0.00017837	1.14	0.00053897	472.7737350160956	22.936	0.70856	22.517	22.016	22.725	-0.41879					42	16	4	0	0	0	0.6204	1	995	995		45.972	3.4978	1	330150			22004	915	14839	14849	25369	25369					0.059820540689429436
KLNKELIHWT	10	Unmodified	_KLNKELIHWT_					0	0	0			REV__nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	REV__nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.362060546875	2	641.36933	1280.72411	-1.155	-0.00074077	0.65147	0.00041783	-0.50351	-0.00032294	641.8716701919084	114.1	0.48959	114.06	113.94	114.43	-0.044777					11	10	2	0	0	0	0.37624	1	12230	12230		20.947	0.95016	1	34842	+		22005	18887	14840	14850	25370	25370					0.09497340731172699
KLNKKLKKR	9	Unmodified	_KLNKKLKKR_					0	0	0			REV__ENST00000480371.1_1_15:99679435-99696487:-|nuORF	REV__ENST00000480371.1_1_15:99679435-99696487:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	578.1279296875	2	578.40605	1154.79755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.355	1	31.467	30.967	31.967	0.11198								0	0	0	0.34348	1	1431	1431		16.473	2.336	1		+		22006	27415	14841	14851	25371	25371					0.22633933964311836
KLNMLPLFLKL	11	Unmodified	_KLNMLPLFLKL_					0	0	0			REV__ENST00000547216.1_1_12:57871100-57871594:-|nuORF	REV__ENST00000547216.1_1_12:57871100-57871594:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	443.94842529296875	3	443.949077	1328.8254	0.74556	0.00033099	-1.9316	-0.00085753	-1.186	-0.00052654	443.9481188888374	107.16	1.4993	107.25	106.38	107.88	0.091263					116	35	4	0	0	0	0.74405	1	11485	11485		23.378	6.2112	1	2920200	+		22007	28546	14842	14852	25372	25372					0.17414076109503185
KLNSAKTLSIK	11	Unmodified	_KLNSAKTLSIK_					0	0	0			REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1	REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.2525939941406	3	401.587084	1201.73942	-0.22844	-9.1739E-05	1.7503	0.00070289	1.5218	0.00061115	401.5878654619957	21.958	0.30043	21.348	21.25	21.551	-0.6107					10	7	2	0	0	0	0.17272	1	856	856		25.892	11.806	1	44775	+		22008	17290	14843	14853	25373	25373					0.1466220752836307
KLNSDRTDL	9	Unmodified	_KLNSDRTDL_					0	0	0		ENST00000556502.1_1_14:60619584-60632027:-|nuORF	ENST00000556502.1_1_14:60619584-60632027:-|nuORF	ENST00000556502.1_1_14:60619584-60632027:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2843627929688	2	531.28292	1060.55129	0.76638	0.00040717	3.2983	0.0017523	4.0647	0.0021595	531.2844722682192	55.118	0.79617	55.519	55.069	55.866	0.40101					38	18	3	0	0	0	0.11055	1	5628	5628		90.37	10.919	1	2419100			22009	13749	14844	14854	25374	25374					0.02343349603961542
KLNWTGTSK	9	Unmodified	_KLNWTGTSK_					0	0	0		ENST00000554156.5_1_14:77924532-77928597:+|nuORF;ENST00000556963.5_1_14:77924568-77929110:+|nuORF;nc|ENSG00000100591|O95433-2|AHSA1;ENSG00000100591|ENST00000216479|AHSA1	ENST00000554156.5_1_14:77924532-77928597:+|nuORF	ENST00000554156.5_1_14:77924532-77928597:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.7847900390625	2	517.785099	1033.55564	-0.3047	-0.00015777	0.16263	8.4205E-05	-0.14207	-7.3563E-05	517.7850251642235	28.444	0.69475	28.347	27.974	28.669	-0.096947					43	16	4	0	0	0	0.018862	3	1720	1709;1720;1731		126.24	27.613	1	811060			22010	1851	14845	14855	25375;25376;25377	25376					0.040208588175119075
KLNWTGTSK	9	Unmodified	_KLNWTGTSK_					0	0	0		ENST00000554156.5_1_14:77924532-77928597:+|nuORF;ENST00000556963.5_1_14:77924568-77929110:+|nuORF;nc|ENSG00000100591|O95433-2|AHSA1;ENSG00000100591|ENST00000216479|AHSA1	ENST00000554156.5_1_14:77924532-77928597:+|nuORF	ENST00000554156.5_1_14:77924532-77928597:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.7848510742188	2	517.785099	1033.55564	0.84896	0.00043958	-0.954	-0.00049397	-0.10503	-5.4384E-05	517.7844356479231	28.549	0.78268	28.376	27.934	28.717	-0.17336					53	19	4	0	0	0	0.059135	4	1738	1727;1738;1746;1756		104.06	27.21	1	976020			22011	1851	14845	14855	25378;25379;25380;25381	25379					0.040208588175119075
KLPAMKKG	8	Unmodified	_KLPAMKKG_					0	0	0			REV__nc|ENSG00000170004|Q12873-3|CHD3	REV__nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7737121582031	2	436.772948	871.531344	0.068775	3.0039E-05	1.8603	0.00081255	1.9291	0.00084258	436.77361932227035	26.594	0.6912	26.703	26.441	27.132	0.10901					65	32	3	0	0	0	0.7961	1	1028	1028		17.365	4.4058	1	226120	+		22012	30022	14846	14856	25382	25382					0.09043927130301199
KLPDVLELTH	10	Unmodified	_KLPDVLELTH_					0	0	0			REV__ENSG00000057468|ENST00000263187|MSH4	REV__ENSG00000057468|ENST00000263187|MSH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8330688476562	2	582.834788	1163.65502	-0.83199	-0.00048491	-2.8678	-0.0016715	-3.6998	-0.0021564	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.8608	1	9846	9846		34.173	1.3601	1	796430	+		22013	16427	14847	14857	25383	25383					0.07974256711599992
KLPDWEKF	8	Unmodified	_KLPDWEKF_					0	0	0			REV__ENSG00000100109|ENST00000407690|TFIP11	REV__ENSG00000100109|ENST00000407690|TFIP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.7822875976562	2	531.784567	1061.55458	-0.45981	-0.00024452	-3.7328	-0.001985	-4.1926	-0.0022295	531.7825831037422	29.277	2.7619	29.248	28.206	30.968	-0.029207					186	63	5	0	0	0	0.36381	2	1801	1789;1801		82.305	5.4584	1	10622000	+		22014	17140	14848	14858	25384;25385	25385					0.026266444486054752
KLPFERLA	8	Unmodified	_KLPFERLA_					0	0	0		nc|ENSG00000003096|Q9P2N7-2|KLHL13;ENSG00000003096|ENST00000540167|KLHL13;nc|ENSG00000003096|Q9P2N7-4|KLHL13;nc|ENSG00000003096|Q9P2N7|KLHL13;nc|ENSG00000003096|Q9P2N7-5|KLHL13;ENSG00000198642|ENST00000359039|KLHL9	nc|ENSG00000003096|Q9P2N7-2|KLHL13	nc|ENSG00000003096|Q9P2N7-2|KLHL13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.2923278808594	2	487.295102	972.575651	-0.70314	-0.00034264	-3.2434	-0.0015805	-3.9466	-0.0019231	487.29338906256316	90.865	2.6767	91.083	90.551	93.228	0.21736					133	64	3	0	0	0	0.86288	1	9168	9168		26.796	1.3459	1	1731200			22015	655	14849	14859	25386	25386					0.0882665454812468
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.980712890625	3	483.647671	1447.92118	-0.99627	-0.00048184	-1.8756	-0.00090712	-2.8718	-0.001389	483.64666286648185	45.633	1.4844	46.528	45.964	47.448	0.89542					143	36	5	0	0	0	0.81021	1	4321	4321		9.2118	2.5522	1	13898000	+		22016	15650	14850	14860	25387	25387					0.21513985064598273
KLPKAKAQVNL	11	Unmodified	_KLPKAKAQVNL_					0	0	0			REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8	REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9292297363281	3	403.92744	1208.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.51	1	48.548	48.048	49.048	0.037731								0	0	0	0.56276	1	3700	3700		16.53	1.1924	1		+		22017	30120	14851	14861	25388	25388					0.16446217627890292
KLPKGILKK	9	Unmodified	_KLPKGILKK_					0	0	0		ENSG00000163545|ENST00000367157|NUAK2	ENSG00000163545|ENST00000367157|NUAK2	ENSG00000163545|ENST00000367157|NUAK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.8654174804688	2	512.865695	1023.71684	1.1353	0.00058227	-1.6611	-0.00085194	-0.52581	-0.00026967	512.8647752812828	23.127	0.45744	22.553	22.334	22.792	-0.57415					20	11	2	0	0	0	0.25483	1	1009	1009		68.787	5.4806	1	118430			22018	5823	14852	14862	25389	25389					0.205926529214139
KLPKLNRRLS	10	Unmodified	_KLPKLNRRLS_					0	0	0		nc|ENSG00000141068|Q8IVT5-4|KSR1;nc|ENSG00000141068|Q8IVT5-3|KSR1;nc|ENSG00000141068|Q8IVT5|KSR1;nc|ENSG00000141068|Q8IVT5-2|KSR1;ENSG00000141068|ENST00000644974|KSR1	nc|ENSG00000141068|Q8IVT5-4|KSR1	nc|ENSG00000141068|Q8IVT5-4|KSR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9329833984375	3	408.934818	1223.78262	0.46238	0.00018908	-2.5602	-0.001047	-2.0978	-0.00085788	408.9337641207	16.291	0.68274	16.267	16.091	16.773	-0.024035					86	29	4	0	0	0	0.8492	1	140	140		18.531	1.8137	1	1069300			22019	14962	14853	14863	25390	25390					0.17968442096298531
KLPKNEKPKK	10	Unmodified	_KLPKNEKPKK_					0	0	0			REV__ENSG00000171843|ENST00000380338|MLLT3	REV__ENSG00000171843|ENST00000380338|MLLT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.929931640625	3	403.92744	1208.76049	0.25224	0.00010189	2.3681	0.00095656	2.6204	0.0010584	403.92827500047315	43.269	1.3362	43.703	43.17	44.506	0.4334					104	32	4	0	0	0	0.85485	1	3949	3949		21.032	3.1991	1	3935700	+		22020	21776	14854	14864	25391	25391					0.16446217627867554
KLPKRLLR	8	Unmodified	_KLPKRLLR_					0	0	0		CON__Q03247	CON__Q03247	CON__Q03247	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.3604736328125	2	512.361111	1022.70767	-0.13841	-7.0915E-05	0.35065	0.00017966	0.21225	0.00010875	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.81548	1	7309	7309		20.482	6.7065	1	293160		+	22021	601	14855	14865	25392	25392					0.19722304355730103
KLPLHPGA	8	Unmodified	_KLPLHPGA_					0	0	0			REV__ENSG00000205572|ENST00000380750|SERF1B	REV__ENSG00000205572|ENST00000380750|SERF1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.83734130859375	2	416.755613	831.496673	0.14808	6.1712E-05	1.8141	0.00075603	1.9622	0.00081774	416.7566410743932	30.461	0.43654	30.465	30.316	30.753	0.0037212					11	9	2	0	0	0	0.4196	1	2000	2000		14.664	9.9823	1	23815	+		22022	23564	14856	14866	25393	25393					0.07418427313848497
KLPLKPNDLKN	11	Unmodified	_KLPLKPNDLKN_					0	0	0		ENSG00000177119|ENST00000320560|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6;nc|ENSG00000177119|Q4KMQ2-2|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF;nc|ENSG00000177119|Q4KMQ2-3|ANO6	ENSG00000177119|ENST00000320560|ANO6	ENSG00000177119|ENST00000320560|ANO6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3932495117188	2	640.390262	1278.76597	0.51397	0.00032914	3.5187	0.0022534	4.0327	0.0025825	640.3923882876153	53.544	0.83096	53.626	53.252	54.083	0.081524					35	21	2	0	0	0	0.74763	1	4372	4372		22.58	0.61977	1	183090			22023	7119	14857	14867	25394	25394					0.13773896419684206
KLPLQSQVGQY	11	Unmodified	_KLPLQSQVGQY_					0	0	0		nc|ENSG00000100207|Q9UGU0-2|TCF20;ENSG00000100207|ENST00000677622|TCF20	nc|ENSG00000100207|Q9UGU0-2|TCF20	nc|ENSG00000100207|Q9UGU0-2|TCF20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	630.8492431640625	2	630.85097	1259.68739	0.56515	0.00035653	0.4477	0.00028243	1.0128	0.00063896	630.8503293841808	60.278	0.35537	60.395	60.168	60.524	0.11676					22	12	2	0	0	0	0.7144	1	5218	5218		29.17	3.1067	1	147980			22024	1808	14858	14868	25395	25395					0.06793044114624536
KLPNKKLVR	9	Unmodified	_KLPNKKLVR_					0	0	0			REV__ENSG00000174444|ENST00000307961|RPL4	REV__ENSG00000174444|ENST00000307961|RPL4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.3746337890625	2	548.371675	1094.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.635	1	36.574	36.074	37.074	-0.060333								0	0	0	0.32469	1	2029	2029		21.96	7.095	1		+		22025	21993	14859	14869	25396	25396					0.18522269664595115
KLPNLTHLNLS	11	Unmodified	_KLPNLTHLNLS_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ENST00000473205.1_1_9:100746884-100764563:+|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B	nc|ENSG00000136938|Q92688-2|ANP32B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	625.3670654296875	2	625.366787	1248.71902	2.002	0.001252	-2.7549	-0.0017228	-0.75286	-0.00047081	625.364760825802	103.43	0.61937	103.66	103.42	104.04	0.22556					43	14	4	0	0	0	0.66929	1	12542	12542		36.447	1.2947	1	6468300			22026	4163	14860	14870	25397	25397					0.10461036868582596
KLPPGSTLRLK	11	Unmodified	_KLPPGSTLRLK_					0	0	0			REV__ENST00000322313.8_1_2:128458880-128459129:-|nuORF	REV__ENST00000322313.8_1_2:128458880-128459129:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.92999267578125	3	403.92744	1208.76049	2.3249	0.0009391	3.1739	0.001282	5.4989	0.0022211	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.79224	1	3967	3967		12.957	0.7508	1	2948200	+		22027	25022	14861	14871	25398	25398					0.16446217627867554
KLPPRWVPT	9	Unmodified	_KLPPRWVPT_					0	0	0			REV__nc|ENSG00000182329|Q0VF49|KIAA2012	REV__nc|ENSG00000182329|Q0VF49|KIAA2012	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3331909179688	2	547.329476	1092.6444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.52	1	116.48	115.98	116.98	-0.037872								0	0	0	0.36148	1	13970	13970		11.511	0	1		+		22028	22518	14862	14872	25399	25399					0.10178318847852097
KLPQWLKGLL	10	Unmodified	_KLPQWLKGLL_					0	0	0		ENSG00000117480|ENST00000243167|FAAH;ENST00000484697.5_1_1:46871424-46877830:+|nuORF	ENSG00000117480|ENST00000243167|FAAH	ENSG00000117480|ENST00000243167|FAAH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.381103515625	2	598.381709	1194.74886	-1.1086	-0.00066337	0.8554	0.00051186	-0.2532	-0.00015151	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.86589	1	2686	2686		29.15	6.1071	1	352020			22029	2982	14863	14873	25400	25400					0.15928020604565063
KLPSLRFTG	9	Unmodified	_KLPSLRFTG_					0	0	0			REV__ENST00000586135.1_2_18:34773574-34802187:+|nuORF	REV__ENST00000586135.1_2_18:34773574-34802187:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.80364990234375	2	509.805834	1017.59712	0.31699	0.0001616	-4.4775	-0.0022826	-4.1605	-0.002121	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.77696	1	10219	10219		31.53	1.2121	1	2635100	+		22030	29099	14864	14874	25401	25401					0.08902039576832976
KLPSVWHK	8	Unmodified	_KLPSVWHK_					0	0	0			REV__ENSG00000180626|ENST00000575779|ZNF594	REV__ENSG00000180626|ENST00000575779|ZNF594	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.795654296875	2	497.795269	993.575986	0.32848	0.00016352	0.8359	0.0004161	1.1644	0.00057962	497.7954109844358	48.391	0.87605	48.429	47.96	48.836	0.037731					54	21	3	0	0	0	0.8347	1	3695	3695		23.042	1.3402	1	407880	+		22031	22405	14865	14875	25402	25402					0.07894074267983342
KLPTLVVRPL	10	Unmodified	_KLPTLVVRPL_					0	0	0			REV__ENSG00000171456|ENST00000375687|ASXL1	REV__ENSG00000171456|ENST00000375687|ASXL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8532104492188	2	568.381709	1134.74886	-1.3925	-0.00079145	2.5841	0.0014688	1.1917	0.00067732	568.3824093433963	102.61	0.45129	102.74	102.49	102.94	0.13569					17	10	2	0	0	0	0.37624	1	10736	10736		44.117	16.235	1	246450	+		22032	21731	14866	14876	25403	25403					0.18688020604554367
KLPTSWDL	8	Unmodified	_KLPTSWDL_					0	0	0			REV__ENSG00000158106|ENST00000289013|RHPN1	REV__ENSG00000158106|ENST00000289013|RHPN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.7645568847656	2	480.263468	958.512382	-0.68802	-0.00033043	0.52598	0.00025261	-0.16204	-7.7822E-05	480.26373048403906	80.818	0.28664	81.345	81.12	81.406	0.52676					9	6	2	0	0	0	0.4196	1	9301	9301		18.324	0	1	165910	+		22033	20587	14867	14877	25404	25404					0.031466690402339736
KLPVDSER	8	Unmodified	_KLPVDSER_					0	0	0			REV__ENSG00000074842|ENST00000262947|MYDGF	REV__ENSG00000074842|ENST00000262947|MYDGF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.263916015625	2	472.263999	942.513445	0.76763	0.00036253	-0.40865	-0.00019299	0.35898	0.00016953	472.2636171025307	20.516	0.59324	20.057	19.687	20.28	-0.4591					16	12	2	0	0	0	0.87064	1	657	657		29.15	0	1	79193	+		22034	16696	14868	14878	25405	25405					0.03988883409135724
KLPWKGASR	9	Unmodified	_KLPWKGASR_					0	0	0			REV__ENSG00000115085|ENST00000264972|ZAP70	REV__ENSG00000115085|ENST00000264972|ZAP70	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.811767578125	2	521.811451	1041.60835	-0.55479	-0.00028949	0.92219	0.00048121	0.36741	0.00019172	521.811595039529	30.649	0.70826	30.678	30.362	31.07	0.028618					39	15	3	0	0	0	0.6204	1	2033	2033		45.972	10.354	1	310940	+		22035	18084	14869	14879	25406	25406					0.08920861671003877
KLPWKGASR	9	Unmodified	_KLPWKGASR_					0	0	0			REV__ENSG00000115085|ENST00000264972|ZAP70	REV__ENSG00000115085|ENST00000264972|ZAP70	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	521.811451	1041.60835	-0.55479	-0.00028949	0.92219	0.00048121	0.36741	0.00019172	521.811595039529	30.649	0.70826	30.678	30.362	31.07	0.028618	-0.014853	0.0002885	NaN	45.972	39	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310940	+		22036	18084	14869	14879							0.08920861671003877
KLQAILVTY	9	Unmodified	_KLQAILVTY_					0	0	0			REV__ENST00000314970.10_1_4:185580560-185587128:+|nuORF	REV__ENST00000314970.10_1_4:185580560-185587128:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8268432617188	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.72402	1	10725	10725		38.806	6.8513	1	30867000	+		22037	24940	14870	14880	25407	25407					0.11092077033868009
KLQALTLGRHA	11	Unmodified	_KLQALTLGRHA_					0	0	0		nc|ENSG00000186715|Q2TV78-2|MST1L;nc|ENSG00000186715|Q2TV78|MST1L;ENST00000442552.7_1_1:17085068-17087541:-|nuORF	nc|ENSG00000186715|Q2TV78-2|MST1L	nc|ENSG00000186715|Q2TV78-2|MST1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3666381835938	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.77061	1	12373	12373		17.468	0.10304	1	3346600			22038	15162	14871	14881	25408	25408					0.12459876308275852
KLQAVVPLPDA	11	Unmodified	_KLQAVVPLPDA_					0	0	0		nc|ENSG00000149972|O94779-2|CNTN5;ENSG00000149972|ENST00000524871|CNTN5	nc|ENSG00000149972|O94779-2|CNTN5	nc|ENSG00000149972|O94779-2|CNTN5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.842529296875	2	575.845156	1149.67576	-0.49921	-0.00028747	-3.2743	-0.0018855	-3.7735	-0.002173	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.48529	1	8902	8902		52.937	3.4952	1	1518700			22039	5058	14872	14882	25409	25409					0.10690847091291289
KLQAVVPLPDA	11	Unmodified	_KLQAVVPLPDA_					0	0	0		nc|ENSG00000149972|O94779-2|CNTN5;ENSG00000149972|ENST00000524871|CNTN5	nc|ENSG00000149972|O94779-2|CNTN5	nc|ENSG00000149972|O94779-2|CNTN5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8422241210938	2	575.845156	1149.67576	0.60609	0.00034901	-4.3948	-0.0025308	-3.7888	-0.0021817	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.45916	1	9121	9121		54.776	5.3348	1	2381900			22040	5058	14872	14882	25410	25410					0.10690847091291289
KLQDIHRKKLL	11	Unmodified	_KLQDIHRKKLL_					0	0	0			REV__ENSG00000047315|ENST00000314595|POLR2B	REV__ENSG00000047315|ENST00000314595|POLR2B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8006591796875	3	464.633027	1390.87725	0.18228	8.4693E-05	0.31948	0.00014844	0.50176	0.00023314	464.63311312812624	45.457	0.69556	45.438	44.925	45.62	-0.018585					20	15	2	0	0	0	0.17648	1	3528	3528		26.75	23.341	1	55668	+		22041	16349	14873	14883	25411	25411					0.19744955847636447
KLQEAESNLRK	11	Unmodified	_KLQEAESNLRK_					0	0	0		ENST00000587602.5_1_19:1073185-1086002:+|nuORF;chr19:1071358-1073149|43|11.79|0.27|5.42|+|ENST00000543365|ARHGAP45,ARHGAP45;ENSG00000180448|ENST00000313093|ARHGAP45;nc|ENSG00000180448|Q92619-2|ARHGAP45	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.24932861328125	3	439.249131	1314.72556	0.26702	0.00011729	-0.72509	-0.0003185	-0.45807	-0.00020121	439.24863416695456	23.471	1.1082	23.09	22.686	23.794	-0.38178					64	25	4	0	0	0	0.0037637	3	1032	1032;1043;1056		115.23	44.393	1	584580			22042	262	14874	14884	25412;25413;25414	25412					0.08078930029250841
KLQEAESNLRK	11	Unmodified	_KLQEAESNLRK_					0	0	0		ENST00000587602.5_1_19:1073185-1086002:+|nuORF;chr19:1071358-1073149|43|11.79|0.27|5.42|+|ENST00000543365|ARHGAP45,ARHGAP45;ENSG00000180448|ENST00000313093|ARHGAP45;nc|ENSG00000180448|Q92619-2|ARHGAP45	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2489929199219	3	439.249131	1314.72556	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.284	1	22.71	22.21	23.21	-0.57415								0	0	0	0.083903	1	1026	1026		82.494	12.096	1				22043	262	14874	14884	25415	25415					0.08078930029250841
KLQEAESNLRK	11	Unmodified	_KLQEAESNLRK_					0	0	0		ENST00000587602.5_1_19:1073185-1086002:+|nuORF;chr19:1071358-1073149|43|11.79|0.27|5.42|+|ENST00000543365|ARHGAP45,ARHGAP45;ENSG00000180448|ENST00000313093|ARHGAP45;nc|ENSG00000180448|Q92619-2|ARHGAP45	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.24920654296875	3	439.249131	1314.72556	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.36	1	22.786	22.286	23.286	-0.57415								0	0	0	5.8114E-11	1	1036	1036		108.31	22.451	1				22044	262	14874	14884	25416	25416					0.08078930029250841
KLQEAESNLRK	11	Unmodified	_KLQEAESNLRK_					0	0	0		ENST00000587602.5_1_19:1073185-1086002:+|nuORF;chr19:1071358-1073149|43|11.79|0.27|5.42|+|ENST00000543365|ARHGAP45,ARHGAP45;ENSG00000180448|ENST00000313093|ARHGAP45;nc|ENSG00000180448|Q92619-2|ARHGAP45	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	ENST00000587602.5_1_19:1073185-1086002:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2491455078125	3	439.249131	1314.72556	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.443	1	22.869	22.369	23.369	-0.57415								0	0	0	7.4511E-06	1	1047	1047		95.483	21.642	1				22045	262	14874	14884	25417	25417					0.08078930029250841
KLQELKKYG	9	Unmodified	_KLQELKKYG_					0	0	0		ENSG00000164070|ENST00000296464|HSPA4L	ENSG00000164070|ENST00000296464|HSPA4L	ENSG00000164070|ENST00000296464|HSPA4L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8299560546875	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.76764	2	9237	9237;9358		34.173	3.6978	1	5219600			22046	5910	14875	14885	25418;25419	25418					0.10094577919812764
KLQGSVSVKVN	11	Unmodified	_KLQGSVSVKVN_					0	0	0		nc|ENSG00000135905|Q96BY6-3|DOCK10;ENSG00000135905|ENST00000258390|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	579.8450317382812	2	579.845687	1157.67682	0.88069	0.00051066	-3.7088	-0.0021505	-2.8281	-0.0016399	579.843435527032	102.18	1.0887	102.31	101.93	103.02	0.13523					81	26	4	0	0	0	0.66929	1	10820	10820		36.447	3.6343	1	2076300			22047	4062	14876	14886	25420	25420					0.10429061460172306
KLQKQIHIL	9	Unmodified	_KLQKQIHIL_					0	0	0		ENST00000550317.1_1_12:111284592-111319020:+|nuORF;nc|ENSG00000173093|Q8NA47-2|CCDC63;ENSG00000173093|ENST00000308208|CCDC63	ENST00000550317.1_1_12:111284592-111319020:+|nuORF	ENST00000550317.1_1_12:111284592-111319020:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8659057617188	2	560.863683	1119.71281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.43	1	112.46	111.96	112.96	0.028854								0	0	0	0.36207	1	12285	12285		8.2313	0.54101	1				22048	6826	14877	14887	25421	25421					0.1577456342770347
KLQKVTAL	8	Unmodified	_KLQKVTAL_					0	0	0			REV__nc|ENSG00000157106|Q96Q15-2|SMG1	REV__nc|ENSG00000157106|Q96Q15-2|SMG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.797119140625	2	450.797478	899.580402	2.3095	0.0010411	-2.5003	-0.0011271	-0.19075	-8.599E-05	450.7962486528249	26.279	1.494	25.939	25.573	27.067	-0.34035					75	33	4	0	0	0	0.89962	1	1492	1492		38.806	3.1879	1	2769400	+		22049	20528	14878	14888	25422	25422					0.12659538690888894
KLQLHNQRSK	10	Unmodified	_KLQLHNQRSK_					0	0	0			REV__chr6:70798737-70836947|28|15.46|0.18|6.42|+|1|SMAP1,None|1	REV__chr6:70798737-70836947|28|15.46|0.18|6.42|+|1|SMAP1,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.9156494140625	3	417.914194	1250.72075	-0.40993	-0.00017132	3.6888	0.0015416	3.2789	0.0013703	417.91574403887137	30.844	1.0551	30.924	30.546	31.601	0.079834					66	23	4	0	0	0	0.86089	1	2086	2086		34.087	3.0184	1	2143500	+		22050	15890	14879	14889	25423	25423					0.10542090677154192
KLQLLYSVP	9	Unmodified	_KLQLLYSVP_					0	0	0			REV__nc|ENSG00000134249|Q9UKF2-2|ADAM30	REV__nc|ENSG00000134249|Q9UKF2-2|ADAM30	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8206787109375	2	530.823692	1059.63283	-1.3153	-0.00069821	-4.3307	-0.0022989	-5.646	-0.0029971	530.821502391275	82.322	1.7995	82.448	81.931	83.731	0.12601					101	41	4	0	0	0	0.78983	1	7891	7891		27.882	0	1	1875200	+		22051	19124	14880	14890	25424	25424					0.10540077033851958
KLQNGRLRLVR	11	Unmodified	_KLQNGRLRLVR_					0	0	0			REV__ENSG00000220008|ENST00000698372|LINGO3	REV__ENSG00000220008|ENST00000698372|LINGO3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.6231384277344	3	451.624755	1351.85244	-1.8035	-0.00081452	1.1089	0.00050082	-0.69461	-0.0003137	451.6251108617355	45.416	1.0919	45.416	44.809	45.901	0					45	26	2	0	0	0	0.74405	1	3333	3333		23.378	4.1152	1	78079	+		22052	23704	14881	14891	25425	25425					0.19058320764906966
KLQNGRLRLVR	11	Unmodified	_KLQNGRLRLVR_					0	0	0			REV__ENSG00000220008|ENST00000698372|LINGO3	REV__ENSG00000220008|ENST00000698372|LINGO3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	451.624755	1351.85244	0.15956	7.2063E-05	-0.97408	-0.00043992	-0.81452	-0.00036786	451.6242107396296	45.487	0.89812	45.468	44.968	45.866	-0.018585	0.20475	-0.0011146	NaN	23.378	42	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100310	+		22053	23704	14881	14891							0.19058320764906966
KLQNGRLRLVR	11	Unmodified	_KLQNGRLRLVR_					0	0	0			REV__ENSG00000220008|ENST00000698372|LINGO3	REV__ENSG00000220008|ENST00000698372|LINGO3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	451.624755	1351.85244	-0.95009	-0.00042909	-0.014963	-6.7577E-06	-0.96506	-0.00043584	451.6246522006309	45.311	0.86928	45.28	44.929	45.798	-0.031067	0.016493	0.00018491	NaN	23.378	34	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136140	+		22054	23704	14881	14891							0.19058320764906966
KLQNGRLRLVR	11	Unmodified	_KLQNGRLRLVR_					0	0	0			REV__ENSG00000220008|ENST00000698372|LINGO3	REV__ENSG00000220008|ENST00000698372|LINGO3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	451.624755	1351.85244	0.051541	2.3277E-05	-3.4852	-0.001574	-3.4336	-0.0015507	451.6240903994239	45.21	1.0276	45.206	44.925	45.952	-0.0041618	-0.05739	-0.0045168	NaN	23.378	40	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82074	+		22055	23704	14881	14891							0.19058320764906966
KLQNGRLRLVR	11	Unmodified	_KLQNGRLRLVR_					0	0	0			REV__ENSG00000220008|ENST00000698372|LINGO3	REV__ENSG00000220008|ENST00000698372|LINGO3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	451.624755	1351.85244	-1.3184	-0.00059544	0.37849	0.00017094	-0.93994	-0.0004245	451.6248586934689	45.054	0.80082	45.066	44.679	45.48	0.012058	-0.19765	0.00071799	NaN	23.378	32	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113280	+		22056	23704	14881	14891							0.19058320764906966
KLQNGRLRLVR	11	Unmodified	_KLQNGRLRLVR_					0	0	0			REV__ENSG00000220008|ENST00000698372|LINGO3	REV__ENSG00000220008|ENST00000698372|LINGO3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	451.624755	1351.85244	-0.24826	-0.00011212	-0.5308	-0.00023972	-0.77906	-0.00035184	451.624464276783	45.213	0.91174	45.145	44.556	45.467	-0.068634	-0.11871	-0.00051399	NaN	23.378	37	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102000	+		22057	23704	14881	14891							0.19058320764906966
KLQNGRLRLVR	11	Unmodified	_KLQNGRLRLVR_					0	0	0			REV__ENSG00000220008|ENST00000698372|LINGO3	REV__ENSG00000220008|ENST00000698372|LINGO3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	451.624755	1351.85244	-1.39	-0.00062774	-1.66	-0.00074968	-3.0499	-0.0013774	451.9591925685069	44.744	0.76901	45.207	44.785	45.554	0.46313	-0.056321	-0.0020439	NaN	23.378	50	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	345140	+		22058	23704	14881	14891							0.19058320764906966
KLQNGRLRLVR	11	Unmodified	_KLQNGRLRLVR_					0	0	0			REV__ENSG00000220008|ENST00000698372|LINGO3	REV__ENSG00000220008|ENST00000698372|LINGO3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	451.624755	1351.85244	-1.0535	-0.00047579	0.63608	0.00028727	-0.41744	-0.00018853	451.62471311642565	44.575	0.76382	45.419	44.986	45.749	0.84437	0.15575	0.001067	NaN	23.378	40	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	377380	+		22059	23704	14881	14891							0.19058320764906966
KLQPLYET	8	Unmodified	_KLQPLYET_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.26513671875	2	496.276575	990.538597	-0.3131	-0.00015538	0.14687	7.2889E-05	-0.16623	-8.2495E-05	496.27651865051325	77.211	0.72578	77.779	77.453	78.179	0.56836					43	16	3	0	0	0	0.4196	1	8857	8857		31.955	2.8053	1	1008400			22060	5149	14882	14892	25426	25426					0.042949382116944435
KLQPRASSR	9	Unmodified	_KLQPRASSR_					0	0	0		ENST00000528609.5_2_11:47681806-47681872:-|nuORF	ENST00000528609.5_2_11:47681806-47681872:-|nuORF	ENST00000528609.5_2_11:47681806-47681872:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.8116455078125	2	521.809439	1041.60433	0.20449	0.00010671	4.0748	0.0021263	4.2793	0.002233	521.8110629991537	30.704	0.74121	30.707	30.36	31.101	0.0037212					35	16	3	0	0	0	0.66686	1	2044	2044		42.864	5.7052	1	343310			22061	13302	14883	14893	25427	25427					0.0851877217726269
KLQQRCRME	9	Unmodified	_KLQQRCRME_					0	0	0		nc|ENSG00000173805|P54257-3|HAP1;nc|ENSG00000173805|P54257-4|HAP1	nc|ENSG00000173805|P54257-3|HAP1	nc|ENSG00000173805|P54257-3|HAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3032836914062	2	596.307892	1190.60123	0.28931	0.00017252	-3.9179	-0.0023362	-3.6285	-0.0021637	596.3049469544615	31.583	0.76895	31.69	31.29	32.059	0.10707					32	16	3	0	0	0	0.76255	1	2182	2182		35.618	5.3006	1	206760			22062	15105	14884	14894	25428	25428					0.013554377366062909
KLQQVVKGLP	10	Unmodified	_KLQQVVKGLP_					0	0	0		ENSG00000081760|ENST00000316519|AACS;nc|ENSG00000081760|Q86V21-2|AACS	ENSG00000081760|ENST00000316519|AACS	ENSG00000081760|ENST00000316519|AACS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.352294921875	2	555.355691	1108.69683	-0.45068	-0.00025029	-3.7051	-0.0020576	-4.1558	-0.0023079	555.3535032243398	101.3	2.2254	101.3	100.77	103	0					164	54	4	0	0	0	0.8488	1	10255	10255		17.365	2.5001	1	2945100			22063	1467	14885	14895	25429	25429					0.14682857190791765
KLQRHSLV	8	Unmodified	_KLQRHSLV_					0	0	0			REV__ENST00000395686.7_1_14:53130539-53133138:-|nuORF	REV__ENST00000395686.7_1_14:53130539-53133138:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.8043212890625	2	490.803626	979.592698	0.8824	0.00043309	3.4199	0.0016785	4.3023	0.0021116	490.8050515680166	28.128	0.66595	27.873	27.587	28.253	-0.25465					35	15	4	0	0	0	0.80308	1	1711	1711		16.473	0	1	298140	+		22064	26118	14886	14896	25430	25430					0.10208575153944821
KLQSLLEMS	9	Unmodified	_KLQSLLEMS_					0	0	0		ENST00000572083.5_1_17:78011982-78014189:+|nuORF	ENST00000572083.5_1_17:78011982-78014189:+|nuORF	ENST00000572083.5_1_17:78011982-78014189:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.78955078125	2	524.788992	1047.56343	0.50063	0.00026272	2.839	0.0014899	3.3397	0.0017526	524.7901500502016	16.299	0.23071	15.7	15.601	15.832	-0.59873					6	4	2	0	0	0	0.7932	1	121	121		21.96	1.013	1	69933			22065	14009	14887	14897	25431	25431					0.04155250022790824
KLQTARPSD	9	Unmodified	_KLQTARPSD_					0	0	0		ENSG00000111266|ENST00000298573|DUSP16	ENSG00000111266|ENST00000298573|DUSP16	ENSG00000111266|ENST00000298573|DUSP16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2797546386719	2	508.28018	1014.54581	0.65224	0.00033152	-0.58773	-0.00029873	0.064515	3.2792E-05	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.71772	1	10384	10384		39.253	1.4413	1	1819500			22066	2567	14888	14898	25432	25432					0.03911670812135526
KLRAERIAQK	10	Unmodified	_KLRAERIAQK_					0	0	0			REV__ENST00000433257.5_1_7:44605603-44609428:-|nuORF	REV__ENST00000433257.5_1_7:44605603-44609428:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.9223937988281	3	404.922689	1211.74624	-0.10374	-4.2008E-05	0.73989	0.0002996	0.63614	0.00025759	404.9228708571067	20.62	0.57698	19.991	19.718	20.295	-0.62961					32	12	3	0	0	0	0.86446	1	677	677		30.569	4.5055	1	143750	+		22067	19301	14889	14899	25433	25433					0.1488356519955687
KLRAHAEAAP	10	Unmodified	_KLRAHAEAAP_					0	0	0			REV__ENSG00000177238|ENST00000322122|TRIM72	REV__ENSG00000177238|ENST00000322122|TRIM72	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.3052978515625	2	532.30399	1062.59343	0.72022	0.00038338	2.8645	0.0015248	3.5847	0.0019081	532.3053999342459	32.665	0.67791	32.877	32.593	33.271	0.21168					35	15	3	0	0	0	0.54701	1	2319	2319		52.937	1.6012	1	927210	+		22068	22191	14890	14900	25434	25434					0.06463369802963825
KLRCLIHEE	9	Carbamidomethyl (C)	_KLRC(Carbamidomethyl (C))LIHEE_	KLRC(1)LIHEE		KLRC(61)LIHEE		0	1	0		ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.3214721679688	2	599.324065	1196.63358	-0.54916	-0.00032913	-2.3652	-0.0014175	-2.9144	-0.0017467	599.3226242431404	59.648	0.79182	59.635	59.36	60.152	-0.013733					36	20	2	0	0	0	0.35373	1	5482	5482		60.972	9.6365	1	284380			22069	6911	14891	14901	25435	25435	88				0.04312548411235184
KLRCLIHEE	9	Carbamidomethyl (C)	_KLRC(Carbamidomethyl (C))LIHEE_					0	1	0		ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	599.324065	1196.63358	-2.134	-0.001279	-0.7085	-0.00042462	-2.8425	-0.0017036	599.3235220965041	59.467	0.82425	59.5	59.09	59.914	0.032822	-0.085398	0.001914	NaN	60.972	43	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	288620			22070	6911	14891	14901			88				0.04312548411235184
KLRDKEWK	8	Unmodified	_KLRDKEWK_					0	0	0		ENSG00000066813|ENST00000329697|ACSM2B;ENSG00000183747|ENST00000573854|ACSM2A	ENSG00000066813|ENST00000329697|ACSM2B	ENSG00000066813|ENST00000329697|ACSM2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	551.8218994140625	2	551.822015	1101.62948	0.15877	8.7612E-05	-0.80499	-0.00044421	-0.64623	-0.0003566	551.8215735464796	40.092	0.66222	40.098	39.831	40.493	0.0065041					34	17	3	0	0	0	0.90523	1	2527	2527		40.778	4.3314	1	333190			22071	1167	14892	14902	25436	25436					0.08272826979828096
KLREAEQQRVK	11	Unmodified	_KLREAEQQRVK_					0	0	0		nc|ENSG00000119392|Q53GS7-2|GLE1;ENSG00000119392|ENST00000309971|GLE1	nc|ENSG00000119392|Q53GS7-2|GLE1	nc|ENSG00000119392|Q53GS7-2|GLE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.2722473144531	3	462.272158	1383.79465	0.12301	5.6866E-05	-0.15138	-6.998E-05	-0.028369	-1.3114E-05	462.2720711836785	18.047	0.46498	17.568	17.376	17.841	-0.47905					25	9	4	0	0	0	0.69071	1	349	349		33.039	3.4886	1	302720			22072	3064	14893	14903	25437	25437					0.1181001404881954
KLREAEQQRVK	11	Unmodified	_KLREAEQQRVK_					0	0	0		nc|ENSG00000119392|Q53GS7-2|GLE1;ENSG00000119392|ENST00000309971|GLE1	nc|ENSG00000119392|Q53GS7-2|GLE1	nc|ENSG00000119392|Q53GS7-2|GLE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.2721862792969	3	462.272158	1383.79465	0.02783	1.2865E-05	-0.044825	-2.0721E-05	-0.016995	-7.8561E-06	462.2720562938143	18.23	0.4582	17.608	17.355	17.813	-0.62141					23	9	4	0	0	0	0.53461	2	361	361;374		49.466	4.8896	1	361470			22073	3064	14893	14903	25438;25439	25438					0.1181001404881954
KLREDKWK	8	Unmodified	_KLREDKWK_					0	0	0			REV__ENSG00000151834|ENST00000381620|GABRA2	REV__ENSG00000151834|ENST00000381620|GABRA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	551.822509765625	2	551.822015	1101.62948	0.26083	0.00014393	-1.1517	-0.00063555	-0.89091	-0.00049162	551.8214348118736	39.941	0.73161	39.893	39.608	40.339	-0.04789					38	20	3	0	0	0	0.91472	1	2483	2483		44.117	0	1	362920	+		22074	20272	14894	14904	25440	25440					0.08272826979828096
KLREKPPVPTR	11	Unmodified	_KLREKPPVPTR_					0	0	0			REV__ENST00000461200.5_1_11:2336617-2336857:+|nuORF	REV__ENST00000461200.5_1_11:2336617-2336857:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2550048828125	3	440.941861	1319.80375	0.41185	0.0001816	-0.73305	-0.00032323	-0.3212	-0.00014163	441.2760121296041	63.43	0.37175	63.984	63.797	64.169	0.55449					12	8	2	0	0	0	0.17368	1	6825	6825		28.577	18.473	1	63583	+		22075	27023	14895	14905	25441	25441					0.15664407405165548
KLRFLADEPQ	10	Unmodified	_KLRFLADEPQ_					0	0	0		nc|ENSG00000115155|Q9HC10-5|OTOF;ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-2|OTOF;chr2:26477043-26477172|20|14.3|0.82|4.12|-|0|OTOF,OTOF|1;nc|ENSG00000115155|Q9HC10-3|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78515625	3	406.227667	1215.66117	0.20088	8.1602E-05	2.3863	0.00096937	2.5871	0.001051	406.56408619228	29.332	0.25907	29.303	29.084	29.343	-0.029207					6	5	2	0	0	0	0.37624	1	1838	1838		18.531	0	1	13544			22076	2814;14858	14896	14906	25442	25442					0.06196774943123273
KLRGKAFY	8	Unmodified	_KLRGKAFY_					0	0	0		ENSG00000144791|ENST00000273317|LIMD1	ENSG00000144791|ENST00000273317|LIMD1	ENSG00000144791|ENST00000273317|LIMD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79412841796875	2	491.795269	981.575986	-0.86128	-0.00042357	1.3952	0.00068615	0.53392	0.00026258	491.79583711541846	45.285	1.262	45.254	44.708	45.97	-0.031067					74	28	3	0	0	0	0.86288	1	3737	3737		26.796	6.3143	1	480390			22077	4731	14897	14907	25443	25443					0.08446074267976655
KLRGKAFY	8	Unmodified	_KLRGKAFY_					0	0	0		ENSG00000144791|ENST00000273317|LIMD1	ENSG00000144791|ENST00000273317|LIMD1	ENSG00000144791|ENST00000273317|LIMD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.795166015625	2	491.795269	981.575986	-0.36021	-0.00017715	1.3022	0.0006404	0.94195	0.00046325	491.79587618632917	55.368	1.5692	55.341	54.702	56.271	-0.027279					123	47	4	0	0	0	0.85277	1	5138	5138		25.45	1.2474	1	1374900			22078	4731	14897	14907	25444	25444					0.08446074267976655
KLRGKAFY	8	Unmodified	_KLRGKAFY_					0	0	0		ENSG00000144791|ENST00000273317|LIMD1	ENSG00000144791|ENST00000273317|LIMD1	ENSG00000144791|ENST00000273317|LIMD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958679199219	2	491.795269	981.575986	-2.0878	-0.0010268	2.9764	0.0014638	0.88855	0.00043698	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.91005	1	4993	4993		42.474	3.6683	1	1484300			22079	4731	14897	14907	25445	25445					0.08446074267976655
KLRGKAFY	8	Unmodified	_KLRGKAFY_					0	0	0		ENSG00000144791|ENST00000273317|LIMD1	ENSG00000144791|ENST00000273317|LIMD1	ENSG00000144791|ENST00000273317|LIMD1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7961120605469	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.206	1	54.791	54.291	55.291	0.58474								0	0	0	0.29631	1	5528	5528		25.45	1.2474	1				22080	4731	14897	14907	25446	25446					0.08446074267976655
KLRGPPPQ	8	Unmodified	_KLRGPPPQ_					0	0	0		nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11	nc|ENSG00000133392|P35749-4|MYH11	nc|ENSG00000133392|P35749-4|MYH11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2603454589844	2	446.771794	891.529036	-0.13944	-6.2296E-05	2.2395	0.0010005	2.1001	0.00093825	446.7764054495448	38.111	2.0086	38.633	37.487	39.496	0.52235					63	49	2	0	0	0	0.4196	1	2996	2996		16.473	7.6508	1	132210			22081	14928	14898	14908	25447	25447					0.07893214716830244
KLRGYLEPG	9	Unmodified	_KLRGYLEPG_					0	0	0			REV__ENSG00000261150|ENST00000615648|EPPK1	REV__ENSG00000261150|ENST00000615648|EPPK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7931518554688	2	516.795466	1031.57638	-1.1229	-0.00058032	-2.9464	-0.0015227	-4.0693	-0.002103	516.7939356050468	88.475	2.4458	88.946	87.694	90.139	0.47068					178	59	4	0	0	0	0.78536	1	10423	10423		29.15	6.1128	1	833210	+		22082	23941	14899	14909	25448	25448					0.06185449197187154
KLRKAAPPA	9	Unmodified	_KLRKAAPPA_					0	0	0			REV__ENSG00000249662|ENST00000638486|LINC02218	REV__ENSG00000249662|ENST00000638486|LINC02218	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.3056335449219	2	476.308544	950.602535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.711	1	66.676	66.176	67.176	-0.035324								0	0	0	0.31472	1	6384	6384		25.45	4.9683	1		+		22083	23866	14900	14910	25449	25449					0.12525763159305825
KLRKDIRPEFR	11	Unmodified	_KLRKDIRPEFR_					0	0	0		nc|ENSG00000008441|Q14938-6|NFIX;nc|ENSG00000008441|Q14938-5|NFIX;nc|ENSG00000008441|Q14938-3|NFIX;nc|ENSG00000008441|Q14938-2|NFIX;nc|ENSG00000008441|Q14938-4|NFIX;ENSG00000008441|ENST00000592199|NFIX	nc|ENSG00000008441|Q14938-6|NFIX	nc|ENSG00000008441|Q14938-6|NFIX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.62713623046875	3	486.628165	1456.86267	1.828	0.00088957	-4.0901	-0.0019904	-2.2621	-0.0011008	486.62614127219416	105.77	0.68383	105.9	105.62	106.3	0.12742					30	21	2	0	0	0	0.77803	1	12889	12889		15.921	1.1418	1	296400			22084	747	14901	14911	25450	25450					0.15250883699468432
KLRKGLVM	8	Unmodified	_KLRKGLVM_					0	0	0			REV__ENSG00000196305|ENST00000443024|IARS1	REV__ENSG00000196305|ENST00000443024|IARS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2875671386719	2	472.807322	943.600092	-0.10744	-5.0796E-05	0.57732	0.00027296	0.46988	0.00022216	472.80765402223346	95.3	0.16209	95.368	95.268	95.43	0.068344					5	3	2	0	0	0	0.4196	1	9963	9963		9.4706	0	1	136780	+		22085	23114	14902	14912	25451	25451					0.1260359143001324
KLRKLLTAYIM	11	Unmodified	_KLRKLLTAYIM_					0	0	0			REV__ENSG00000150627|ENST00000508596|WDR17	REV__ENSG00000150627|ENST00000508596|WDR17	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.618896484375	3	450.616097	1348.82646	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.037	1	52.096	51.596	52.596	0.059719								0	0	0	0.56276	1	4175	4175		23.378	8.6842	1		+		22086	20215	14903	14913	25452	25452					0.16600290478413626
KLRKRWPLRT	10	Unmodified	_KLRKRWPLRT_					0	0	0			REV__ENST00000577583.1_1_17:27835094-27837891:+|nuORF	REV__ENST00000577583.1_1_17:27835094-27837891:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.2892761230469	3	451.957845	1352.85171	-1.8572	-0.00083938	0.36717	0.00016595	-1.49	-0.00067344	452.2924002719903	43.109	0.77645	43.542	43.17	43.947	0.4334					47	18	5	0	0	0	0.37624	1	3866	3866		11.097	6.2106	1	661140	+		22087	29011	14904	14914	25453	25453					0.18939526115855188
KLRKSFFG	8	Unmodified	_KLRKSFFG_					0	0	0			REV__nc|ENSG00000075391|Q9UJF2|RASAL2	REV__nc|ENSG00000075391|Q9UJF2|RASAL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79620361328125	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.85277	1	4811	4811		25.45	1.2474	1	703950	+		22088	16710	14905	14915	25454	25454					0.08446074267999393
KLRLAEAR	8	Unmodified	_KLRLAEAR_					0	0	0			REV__nc|ENSG00000002079|Q9H6N6|MYH16	REV__nc|ENSG00000002079|Q9H6N6|MYH16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.805908203125	2	478.803626	955.592698	0.24724	0.00011838	4.3933	0.0021035	4.6405	0.0022219	478.8055593968592	41.183	1.271	41.256	40.938	42.209	0.073414					62	33	2	0	0	0	0.85277	1	2739	2739		25.45	6.0902	1	199990	+		22089	29665	14906	14916	25455	25455					0.11312575153931448
KLRLGRLPPAS	11	Unmodified	_KLRLGRLPPAS_					0	0	0			REV__ENST00000479016.2_1_12:56618280-56618448:+|nuORF	REV__ENST00000479016.2_1_12:56618280-56618448:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.366455078125	2	604.385314	1206.75608	3.2055	0.0019373	4.1485	0.0025073	7.354	0.0044447	604.3868392224999	104.67	0.67479	104.63	104.02	104.69	-0.04039					21	15	2	0	0	0	0.17347	1	11463	11463		36.447	12.924	1	361030	+		22090	27392	14907	14917	25456	25456					0.16096753205010828
KLRLLELENVP	11	Unmodified	_KLRLLELENVP_					0	0	0		nc|ENSG00000102890|Q96BJ8-2|ELMO3;ENSG00000102890|ENST00000393997|ELMO3;nc|ENSG00000102890|Q96BJ8-3|ELMO3	nc|ENSG00000102890|Q96BJ8-2|ELMO3	nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.9391784667969	3	441.938005	1322.79219	-0.13164	-5.8177E-05	4.2789	0.001891	4.1472	0.0018328	441.93974761618824	56.948	1.0225	56.935	56.674	57.696	-0.012203					78	36	3	0	0	0	0.76892	1	5151	5151		17.833	0.6664	1	317980			22091	2028	14908	14918	25457	25457					0.1437016559116273
KLRPDIGVRPT	11	Unmodified	_KLRPDIGVRPT_					0	0	0		ENSG00000163285|ENST00000295452|GABRG1	ENSG00000163285|ENST00000295452|GABRG1	ENSG00000163285|ENST00000295452|GABRG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.9223937988281	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.77061	1	11452	11452		11.455	0.45641	1	19495000			22092	5779	14909	14919	25458	25458					0.1305614547973164
KLRPGKKKP	9	Unmodified	_KLRPGKKKP_					0	0	0		ENST00000261798.9_1_5:148930705-148930774:-|nuORF	ENST00000261798.9_1_5:148930705-148930774:-|nuORF	ENST00000261798.9_1_5:148930705-148930774:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3611450195312	2	526.358568	1050.70258	1.0713	0.00056389	3.7812	0.0019903	4.8525	0.0025542	526.360423923534	32.788	1.6436	32.999	32.422	34.066	0.21168					152	38	5	0	0	0	0.7932	1	2276	2276		23.042	0	1	7743700			22093	9417	14910	14920	25459	25459					0.1792600049311659
KLRPRKVE	8	Unmodified	_KLRPRKVE_					0	0	0		ENST00000609504.5_2_20:328129-329931:+|nuORF;ENST00000382285.6_1_20:328123-329934:+|nuORF;ENST00000609179.5_1_20:327490-329931:+|nuORF	ENST00000609504.5_2_20:328129-329931:+|nuORF	ENST00000609504.5_2_20:328129-329931:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.3165893554688	2	513.33255	1024.65055	-1.4745	-0.00075692	-2.3088	-0.0011852	-3.7833	-0.0019421	513.331126989909	42.231	0.66243	42.645	42.2	42.863	0.4139					22	16	2	0	0	0	0.4196	1	3699	3699		6.7355	0	1	215760			22094	10972	14911	14921	25460	25460					0.13920837079353987
KLRQKAKPIGA	11	Unmodified	_KLRQKAKPIGA_					0	0	0			REV__ENSG00000064763|ENST00000536681|FAR2	REV__ENSG00000064763|ENST00000536681|FAR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9295959472656	3	403.931185	1208.77173	-1.067	-0.00043099	-3.6376	-0.0014693	-4.7046	-0.0019003	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.78986	1	4077	4077		12.433	0.50046	1	5907700	+		22095	16484	14912	14922	25461	25461					0.17569039722025082
KLRQNIQPH	9	Unmodified	_KLRQNIQPH_					0	0	0			REV__nc|ENSG00000110693|P35712-3|SOX6	REV__nc|ENSG00000110693|P35712-3|SOX6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3298950195312	2	567.330539	1132.64652	1.203	0.00068247	-1.0748	-0.00060977	0.12815	7.2702E-05	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.7932	1	10601	10601		3.6843	0	1	4990000	+		22096	17823	14913	14923	25462	25462					0.08550747585650242
KLRQPFFQK	9	Unmodified	_KLRQPFFQK_					0	0	0		ENST00000497538.1_1_3:155705188-155705881:+|nuORF;nc|ENSG00000119335|Q01105-3|SET;nc|ENSG00000119335|Q01105-4|SET;ENSG00000119335|ENST00000322030|SET;nc|ENSG00000119335|Q01105|SET;ENSG00000230667|ENST00000596516|SETSIP;nc|ENSG00000230667|P0DME0-1|SETSIP	ENST00000497538.1_1_3:155705188-155705881:+|nuORF	ENST00000497538.1_1_3:155705188-155705881:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.3526000976562	2	596.353483	1190.69241	0.28036	0.0001672	-0.22415	-0.00013367	0.056212	3.3522E-05	596.3532384230057	32.741	0.7239	32.868	32.546	33.27	0.12643					46	16	4	0	0	0	0.17307	3	2308	2296;2308;2331		79.451	25.651	1	1037200			22097	3063	14914	14924	25463;25464;25465	25464					0.10469392767868158
KLRQPFFQK	9	Unmodified	_KLRQPFFQK_					0	0	0		ENST00000497538.1_1_3:155705188-155705881:+|nuORF;nc|ENSG00000119335|Q01105-3|SET;nc|ENSG00000119335|Q01105-4|SET;ENSG00000119335|ENST00000322030|SET;nc|ENSG00000119335|Q01105|SET;ENSG00000230667|ENST00000596516|SETSIP;nc|ENSG00000230667|P0DME0-1|SETSIP	ENST00000497538.1_1_3:155705188-155705881:+|nuORF	ENST00000497538.1_1_3:155705188-155705881:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3533935546875	2	596.353483	1190.69241	0.66636	0.00039738	-0.30575	-0.00018233	0.36061	0.00021505	596.3531027493411	32.676	0.76283	32.887	32.55	33.313	0.21168					43	17	4	0	0	0	0.057432	2	2300	2300;2312		104.75	43.775	1	1154900			22098	3063	14914	14924	25466;25467	25466					0.10469392767868158
KLRQQEKRL	9	Unmodified	_KLRQQEKRL_					0	0	0			REV__ENSG00000163798|ENST00000326019|SLC4A1AP	REV__ENSG00000163798|ENST00000326019|SLC4A1AP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.583984375	3	400.250806	1197.73059	-0.37081	-0.00014842	-3.8291	-0.0015326	-4.1999	-0.001681	400.24881333281155	24.759	1.4507	24.713	23.876	25.327	-0.04598					79	33	4	0	0	0	0.78912	1	979	979		28.081	1.0342	1	107720	+		22099	20972	14915	14925	25468	25468					0.13963278682558666
KLRQSFRR	8	Unmodified	_KLRQSFRR_					0	0	0		ENST00000554315.5_1_14:73753704-73876743:-|nuORF;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;ENSG00000133961|ENST00000555238|NUMB	ENST00000554315.5_1_14:73753704-73876743:-|nuORF	ENST00000554315.5_1_14:73753704-73876743:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3167724609375	2	545.833249	1089.65194	-0.66163	-0.00036114	-0.93331	-0.00050943	-1.5949	-0.00087057	545.8328445985481	90.498	0.25761	90.498	90.305	90.563	0					6	5	2	0	0	0	0.4196	1	8784	8784		12.207	0.69583	1	35949			22100	3901	14916	14926	25469	25469					0.11070471168113727
KLRRFEERQKR	11	Unmodified	_KLRRFEERQKR_					0	0	0		nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN;ENSG00000092853|ENST00000318121|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2587890625	3	515.974335	1544.90118	4.6273	0.0023876	3.0246	0.0015606	7.6519	0.0039482	515.9758797213476	107.03	0.66654	107.18	106.87	107.53	0.14929					30	20	2	0	0	0	0.18185	1	13051	13051		11.932	5.6115	1	205510			22101	1705	14917	14927	25470	25470					0.1505218933400556
KLRRFEERQKR	11	Unmodified	_KLRRFEERQKR_					0	0	0		nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN;ENSG00000092853|ENST00000318121|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	515.974335	1544.90118	2.2846	0.0011788	5.5021	0.002839	7.7868	0.0040178	516.3117194636202	107.11	0.52661	107.21	106.99	107.51	0.10395	0.016196	0.001079	NaN	11.932	28	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224060			22102	1705	14917	14927							0.1505218933400556
KLRRRNMRVYW	11	Unmodified	_KLRRRNMRVYW_					0	0	0			REV__ENSG00000196305|ENST00000443024|IARS1	REV__ENSG00000196305|ENST00000443024|IARS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.635498046875	3	526.636778	1576.8885	-0.638	-0.00033599	-2.7633	-0.0014552	-3.4013	-0.0017912	526.6352246863673	38.438	0.92299	38.388	37.983	38.906	-0.050369					64	20	4	0	0	0	0.80593	2	2698	2687;2698		10.104	3.783	1	256980	+		22103	23114	14918	14928	25471;25472	25472					0.12313454670129431
KLRRRNMRVYW	11	Unmodified	_KLRRRNMRVYW_					0	0	0			REV__ENSG00000196305|ENST00000443024|IARS1	REV__ENSG00000196305|ENST00000443024|IARS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.9681396484375	3	526.636778	1576.8885	-1.1982	-0.00063101	-2.2657	-0.0011932	-3.4639	-0.0018242	526.635545078395	38.417	1.2642	38.428	38.08	39.345	0.011173					80	29	5	0	0	0	0.74022	3	2642	2630;2642;2654		24.232	14.586	1	282870	+		22104	23114	14918	14928	25473;25474;25475	25474					0.12313454670129431
KLRRRNMRVYW	11	Unmodified	_KLRRRNMRVYW_					0	0	0			REV__ENSG00000196305|ENST00000443024|IARS1	REV__ENSG00000196305|ENST00000443024|IARS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	526.636778	1576.8885	0.17237	9.0775E-05	-3.8442	-0.0020245	-3.6718	-0.0019337	526.6347350424613	38.624	1.0328	38.596	38.084	39.117	-0.027843	0.26554	-0.0014276	NaN	24.232	62	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	243470	+		22105	23114	14918	14928							0.12313454670129431
KLRRRNMRVYW	11	Unmodified	_KLRRRNMRVYW_					0	0	0			REV__ENSG00000196305|ENST00000443024|IARS1	REV__ENSG00000196305|ENST00000443024|IARS1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	526.636778	1576.8885	-1.1982	-0.00063101	-2.2657	-0.0011932	-3.4639	-0.0018242	526.635545078395	38.417	1.2642	38.428	38.08	39.345	0.011173	0.097373	0.0010664	NaN	24.232	80	29	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	282870	+		22106	23114	14918	14928							0.12313454670129431
KLRRRNMRVYW	11	Unmodified	_KLRRRNMRVYW_					0	0	0			REV__ENSG00000196305|ENST00000443024|IARS1	REV__ENSG00000196305|ENST00000443024|IARS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	526.636778	1576.8885	-0.21942	-0.00011555	-2.8895	-0.0015217	-3.1089	-0.0016373	526.635322724346	38.392	0.11417	38.409	38.346	38.46	0.016563	0.077766	8.0819E-05	NaN	24.232	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48922	+		22107	23114	14918	14928							0.12313454670129431
KLRRRNMRVYW	11	Unmodified	_KLRRRNMRVYW_					0	0	0			REV__ENSG00000196305|ENST00000443024|IARS1	REV__ENSG00000196305|ENST00000443024|IARS1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	526.636778	1576.8885	0.58512	0.00030815	-3.0715	-0.0016176	-2.4864	-0.0013094	526.6352031639234	37.782	0.37236	38.095	37.864	38.236	0.31312	-0.23558	-0.00020685	NaN	24.232	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110340	+		22108	23114	14918	14928							0.12313454670129431
KLRRRNMRVYW	11	Unmodified	_KLRRRNMRVYW_					0	0	0			REV__ENSG00000196305|ENST00000443024|IARS1	REV__ENSG00000196305|ENST00000443024|IARS1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	526.636778	1576.8885	0.47568	0.00025051	-3.2968	-0.0017362	-2.8211	-0.0014857	526.6352058084561	37.583	0.45022	38.068	37.87	38.321	0.48581	-0.26229	-0.00056268	NaN	24.232	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98352	+		22109	23114	14918	14928							0.12313454670129431
KLRRRVPKPP	10	Unmodified	_KLRRRVPKPP_					0	0	0			REV__nc|ENSG00000135597|Q96D71-2|REPS1	REV__nc|ENSG00000135597|Q96D71-2|REPS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.9171752929688	2	623.914573	1245.81459	1.3365	0.00083387	1.9957	0.0012451	3.3322	0.002079	623.9155943953253	109.95	0.81959	110.08	109.65	110.46	0.12289					62	32	3	0	0	0	0.88945	1	11831	11831		10.866	0.6003	1	2359700	+		22110	19237	14919	14929	25476	25476					0.2015185457012194
KLRRWLPP	8	Unmodified	_KLRRWLPP_					0	0	0		ENST00000591365.1_1_17:43298722-43299568:-|nuORF	ENST00000591365.1_1_17:43298722-43299568:-|nuORF	ENST00000591365.1_1_17:43298722-43299568:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	533.3402099609375	2	533.337636	1064.66072	0.82148	0.00043812	4.0565	0.0021635	4.878	0.0026016	533.3397014288719	99.113	2.1038	99.27	98.724	100.83	0.15659					144	48	4	0	0	0	0.82419	1	10353	10353		13.775	0.81615	1	2216600			22111	14271	14920	14930	25477	25477					0.1309744480458903
KLRSATASRRG	11	Unmodified	_KLRSATASRRG_					0	0	0		ENSG00000162302|ENST00000334205|RPS6KA4;nc|ENSG00000162302|O75676-2|RPS6KA4	ENSG00000162302|ENST00000334205|RPS6KA4	ENSG00000162302|ENST00000334205|RPS6KA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.8585205078125	2	601.857452	1201.70035	3.2383	0.001949	-2.9565	-0.0017794	0.28178	0.00016959	601.8555799865445	103.53	2.0205	103.49	103.12	105.14	-0.043755					118	48	4	0	0	0	0.72739	1	11382	11382		27.047	2.5281	1	1395200			22112	5677	14921	14931	25478	25478					0.10756920017342964
KLRSLIPFAIF	11	Unmodified	_KLRSLIPFAIF_					0	0	0			REV__ENST00000528377.1_1_11:67375903-67377304:+|nuORF	REV__ENST00000528377.1_1_11:67375903-67377304:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7801818847656	3	435.607819	1303.80163	-1.6299	-0.00070998	-1.2268	-0.00053438	-2.8566	-0.0012444	435.9411082253793	38.761	0.09568	38.772	38.691	38.786	0.010708					4	2	2	0	0	0	0.1745	1	2317	2317		17.833	0	1	18850	+		22113	28246	14922	14932	25479	25479					0.16187978667358038
KLRSLISGKFF	11	Unmodified	_KLRSLISGKFF_					0	0	0			REV__ENSG00000184564|ENST00000647374|SLITRK6	REV__ENSG00000184564|ENST00000647374|SLITRK6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3930053710938	2	648.395348	1294.77614	-1.1413	-0.00074001	-2.4279	-0.0015742	-3.5692	-0.0023142	648.3936534392657	107.12	0.99413	107.16	106.63	107.62	0.036118					92	23	4	0	0	0	0.72106	1	11415	11415		28.081	2.0181	1	53885000	+		22114	22691	14923	14933	25480	25480					0.14054504144928615
KLRSLKPPLN	10	Unmodified	_KLRSLKPPLN_					0	0	0			REV__ENSG00000163788|ENST00000296088|SNRK	REV__ENSG00000163788|ENST00000296088|SNRK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.3759765625	2	583.374415	1164.73428	-0.45026	-0.00026267	4.1254	0.0024066	3.6751	0.002144	583.376632963045	43.234	2.1571	43.207	42.716	44.873	-0.026764					170	50	4	0	0	0	0.86272	1	3334	3334		24.519	2.5593	1	3607200	+		22115	20970	14924	14934	25481	25481					0.15849948456411767
KLRSPRLLLLL	11	Unmodified	_KLRSPRLLLLL_					0	0	0			REV__chr14:74891164-74892834|13|15.62|0.55|4.84|+|0|None,DLST|1	REV__chr14:74891164-74892834|13|15.62|0.55|4.84|+|0|None,DLST|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7879943847656	3	441.306252	1320.89693	-0.065741	-2.9012E-05	-1.0907	-0.00048133	-1.1564	-0.00051034	441.30561341688383	38.036	1.2956	38.558	37.867	39.162	0.52235					78	26	4	0	0	0	0.17648	1	3103	3103		21.032	0	1	1137100	+		22116	15605	14925	14935	25482	25482					0.2493133185841998
KLRSQISST	9	Unmodified	_KLRSQISST_					0	0	0			REV__nc|ENSG00000170500|Q1L5Z9-2|LONRF2	REV__nc|ENSG00000170500|Q1L5Z9-2|LONRF2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.75091552734375	2	510.29583	1018.57711	1.0449	0.00053323	-0.050018	-2.5524E-05	0.99493	0.00050771	510.29575380897234	19.001	0.29856	19.074	18.94	19.238	0.073465					10	8	2	0	0	0	0.20789	1	360	360		16.473	0	1	13157	+		22117	21667	14926	14936	25483	25483					0.06856243846232246
KLRTKRPFSN	10	Unmodified	_KLRTKRPFSN_					0	0	0			REV__ENSG00000127311|ENST00000247815|HELB	REV__ENSG00000127311|ENST00000247815|HELB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.8711547851562	2	623.872571	1245.73059	-0.065768	-4.1031E-05	-3.3413	-0.0020845	-3.407	-0.0021255	623.8703810158217	104.89	2.4155	104.89	104.43	106.84	0					131	56	4	0	0	0	0.85834	1	10865	10865		22.58	1.6327	1	1348200	+		22118	18726	14927	14937	25484	25484					0.11755278682539938
KLRTQLAVIE	10	Unmodified	_KLRTQLAVIE_					0	0	0			REV__nc|ENSG00000141519|Q4G0X9-3|CCDC40	REV__nc|ENSG00000141519|Q4G0X9-3|CCDC40	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.86669921875	2	585.86388	1169.71321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.514	1	26.174	25.674	26.674	-0.34035								0	0	0	0.45132	1	1470	1470		18.262	1.5447	1		+		22119	19691	14928	14938	25485	25485					0.1351393835689123
KLRTWVEK	8	Unmodified	_KLRTWVEK_					0	0	0			REV__ENST00000496241.6_1_6:4116110-4130478:-|nuORF	REV__ENST00000496241.6_1_6:4116110-4130478:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.317626953125	2	530.319109	1058.62366	1.1766	0.00062396	-2.6967	-0.0014301	-1.5201	-0.00080614	530.31777393265	18.972	0.56728	18.495	18.171	18.738	-0.47694					19	12	2	0	0	0	0.86677	1	440	440		27.882	1.0861	1	58253	+		22120	23364	14929	14939	25486	25486					0.09669728468156791
KLRVRSNDLVL	11	Unmodified	_KLRVRSNDLVL_					0	0	0			REV__ENSG00000141428|ENST00000592875|C18orf21	REV__ENSG00000141428|ENST00000592875|C18orf21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2731018066406	3	438.273499	1311.79867	-1.4635	-0.00064141	0.29289	0.00012837	-1.1706	-0.00051305	438.27353644756727	106.01	0.81467	106.16	105.83	106.65	0.14843					89	19	6	0	0	0	0.67041	2	11331	11331;11343		36.318	4.6834	1	14795000	+		22121	19681	14930	14940	25487;25488	25487					0.15524103542543344
KLRVRSNDLVL	11	Unmodified	_KLRVRSNDLVL_					0	0	0			REV__ENSG00000141428|ENST00000592875|C18orf21	REV__ENSG00000141428|ENST00000592875|C18orf21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2732849121094	3	438.273499	1311.79867	0.73903	0.0003239	-2.0576	-0.00090178	-1.3185	-0.00057788	438.2725101796097	107.07	1.2292	107.16	106.69	107.92	0.091255					130	29	5	0	0	0	0.72374	1	11531	11531		27.644	2.5179	1	4759800	+		22122	19681	14930	14940	25489	25489					0.15524103542543344
KLSALFGLS	9	Unmodified	_KLSALFGLS_					0	0	0		ENST00000469416.1_1_1:40916633-40922838:+|nuORF	ENST00000469416.1_1_1:40916633-40922838:+|nuORF	ENST00000469416.1_1_1:40916633-40922838:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2748107910156	2	468.28166	934.548768	0.2123	9.9414E-05	-1.1873	-0.000556	-0.97502	-0.00045658	468.28120511005636	44.636	0.39521	44.612	44.437	44.832	-0.023079					15	8	2	0	0	0	0.78536	1	3483	3483		29.15	0	1	65668			22123	12197	14931	14941	25490	25490					0.07887545936955576
KLSALFGLS	9	Unmodified	_KLSALFGLS_					0	0	0		ENST00000469416.1_1_1:40916633-40922838:+|nuORF	ENST00000469416.1_1_1:40916633-40922838:+|nuORF	ENST00000469416.1_1_1:40916633-40922838:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	468.28166	934.548768	-0.97191	-0.00045513	0.11964	5.6027E-05	-0.85227	-0.0003991	468.281555206647	44.618	0.4376	44.585	44.313	44.75	-0.033474	0.025128	0.00038154	NaN	29.15	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67846			22124	12197	14931	14941							0.07887545936955576
KLSALFGLS	9	Unmodified	_KLSALFGLS_					0	0	0		ENST00000469416.1_1_1:40916633-40922838:+|nuORF	ENST00000469416.1_1_1:40916633-40922838:+|nuORF	ENST00000469416.1_1_1:40916633-40922838:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	468.28166	934.548768	-1.1096	-0.00051959	0.11909	5.5768E-05	-0.99047	-0.00046382	468.28150124505373	44.486	0.37258	44.482	44.288	44.66	-0.0041618	-0.077976	0.00038103	NaN	29.15	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46707			22125	12197	14931	14941							0.07887545936955576
KLSANLKT	8	Unmodified	_KLSANLKT_					0	0	0			REV__ENST00000435712.1_1_10:131904549-131906742:+|nuORF	REV__ENST00000435712.1_1_10:131904549-131906742:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.771240234375	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.8537	1	2180	2180		25.574	1.3713	1	1151500	+		22126	26681	14932	14942	25491	25491					0.08654375277126292
KLSDFGLSK	9	Unmodified	_KLSDFGLSK_					0	0	0			REV__ENST00000506455.5_1_4:156651268-156651472:+|nuORF	REV__ENST00000506455.5_1_4:156651268-156651472:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7814636230469	2	497.782025	993.549496	-0.90756	-0.00045177	0.91883	0.00045738	0.011267	5.6087E-06	497.7823095839269	38.693	0.58309	39.216	38.87	39.453	0.52236					31	13	4	0	0	0	0.29609	1	3221	3221		65.157	0	1	514590	+		22127	27890	14933	14943	25492	25492					0.05246340585995313
KLSDHKVPI	9	Unmodified	_KLSDHKVPI_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8018798828125	2	518.811116	1035.60768	0.59859	0.00031056	-0.96809	-0.00050225	-0.36949	-0.0001917	518.8104425792434	86.512	0.69661	86.955	86.731	87.428	0.44331					23	16	2	0	0	0	0.20789	1	10161	10161		34.173	0	1	436960	+		22128	23578	14934	14944	25493	25493					0.09130022231261137
KLSDKEDDT	9	Unmodified	_KLSDKEDDT_					0	0	0			REV__ENSG00000152061|ENST00000681986|RABGAP1L	REV__ENSG00000152061|ENST00000681986|RABGAP1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7531127929688	2	525.751118	1049.48768	1.2123	0.00063735	3.792	0.0019936	5.0042	0.002631	525.7529847600721	22.702	0.43969	22.284	22.062	22.502	-0.41879					17	9	2	0	0	0	0.77244	1	936	936		32.812	7.3622	1	96483	+		22129	20282	14935	14945	25494	25494					-0.035080556237971905
KLSELLRYYT	10	Unmodified	_KLSELLRYYT_					0	0	0		ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;ENST00000530115.1_1_11:27910903-27911533:-|nuORF	ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	643.8324584960938	2	643.36117	1284.70779	2.1007	0.0013515	-0.41044	-0.00026406	1.6902	0.0010874	643.8624804400393	49.539	0.69042	50.384	50.034	50.724	0.84501					21	16	2	0	0	0	0.37624	1	4888	4888		29.17	0	1	230110			22130	1452	14936	14946	25495	25495					0.07682214774422391
KLSERRRKRLQ	11	Unmodified	_KLSERRRKRLQ_					0	0	0		nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A	nc|ENSG00000090889|O95239-2|KIF4A	nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	490.9798583984375	3	490.642697	1468.90626	0.74044	0.00036329	0.46452	0.00022791	1.205	0.0005912	490.6430886970644	15.413	0.15292	15.389	15.297	15.45	-0.024207					9	4	3	0	0	0	0.76251	1	35	35		19.263	5.1767	1	37693			22131	1658	14937	14947	25496	25496					0.1905649319664917
KLSERRRKRLQ	11	Unmodified	_KLSERRRKRLQ_					0	0	0		nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A	nc|ENSG00000090889|O95239-2|KIF4A	nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	490.642697	1468.90626	0.072192	3.542E-05	1.5744	0.00077249	1.6466	0.00080791	490.64355823928776	15.445	0.14655	15.503	15.437	15.583	0.057872	0.057221	0.00049062	NaN	19.263	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57923			22132	1658	14937	14947							0.1905649319664917
KLSFLVLKNTC	11	Unmodified	_KLSFLVLKNTC_					0	0	0			REV__ENST00000486530.1_1_3:148847510-148871436:+|nuORF	REV__ENST00000486530.1_1_3:148847510-148871436:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3684692382812	2	633.367941	1264.72133	1.4972	0.00094828	0.53741	0.00034038	2.0346	0.0012887	633.3681812370636	95.449	2.3087	95.87	94.551	96.859	0.42051					197	55	4	0	0	0	0.67778	1	11304	11304		35.152	5.982	1	3612700	+		22133	20967	14938	14948	25497	25497					0.09955749282016768
KLSFVMMW	8	Unmodified	_KLSFVMMW_					0	0	0			REV__ENST00000468296.5_1_3:75834033-75834192:-|nuORF	REV__ENST00000468296.5_1_3:75834033-75834192:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.7818603515625	2	521.266642	1040.51873	-0.50212	-0.00026174	-3.6884	-0.0019226	-4.1905	-0.0021844	521.2645864799675	47.857	0.39294	48.327	48.194	48.587	0.46941					14	9	2	0	0	0	0.4196	1	4609	4609		44.531	7.372	1	176260	+		22134	27180	14939	14949	25498	25498					9.147675746135064E-05
KLSGDSLRIRQ	11	Unmodified	_KLSGDSLRIRQ_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.9175109863281	3	424.917604	1271.73098	0.65926	0.00028013	-0.56508	-0.00024011	0.09418	4.0019E-05	424.9173620637762	25.13	0.58281	24.802	24.521	25.104	-0.32825					35	12	4	0	0	0	0.59831	1	1265	1265		44.639	0.98865	1	315440	+		22135	18092	14940	14950	25499	25499					0.10598653611737063
KLSGDSLRIRQ	11	Unmodified	_KLSGDSLRIRQ_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	424.917604	1271.73098	0.65926	0.00028013	-0.56508	-0.00024011	0.09418	4.0019E-05	424.9173620637762	25.13	0.58281	24.802	24.521	25.104	-0.32825	0.049341	0.0014894	NaN	44.639	35	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	315440	+		22136	18092	14940	14950							0.10598653611737063
KLSGDSLRIRQ	11	Unmodified	_KLSGDSLRIRQ_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	424.917604	1271.73098	2.4551	0.0010432	-2.3021	-0.00097821	0.15295	6.4989E-05	424.9166073227166	25.134	0.57406	24.703	24.408	24.983	-0.4311	-0.049341	-0.00072486	NaN	44.639	31	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	264060	+		22137	18092	14940	14950							0.10598653611737063
KLSGKLRRE	9	Unmodified	_KLSGKLRRE_					0	0	0			REV__ENSG00000146197|ENST00000274938|SCUBE3	REV__ENSG00000146197|ENST00000274938|SCUBE3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.8009643554688	2	543.840739	1085.66693	0.048893	2.659E-05	-0.96125	-0.00052277	-0.91236	-0.00049618	543.8400879535374	16.669	0.26531	16.058	15.912	16.177	-0.6107					8	5	2	0	0	0	0.20789	1	143	143		19.997	2.6318	1	134750	+		22138	19992	14941	14951	25500	25500					0.12751918245453453
KLSGKLRRE	9	Unmodified	_KLSGKLRRE_					0	0	0			REV__ENSG00000146197|ENST00000274938|SCUBE3	REV__ENSG00000146197|ENST00000274938|SCUBE3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	543.840739	1085.66693	-0.055976	-3.0442E-05	-0.59106	-0.00032144	-0.64704	-0.00035189	543.8401924303065	16.655	0.31681	16.168	16.052	16.369	-0.48718	0.05501	0.00020893	NaN	24.519	11	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95401	+		22139	19992	14941	14951							0.12751918245453453
KLSGLSIK	8	Unmodified	_KLSGLSIK_					0	0	0		ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.3000793457031	2	423.276378	844.538203	0.88684	0.00037538	-4.1173	-0.0017428	-3.2305	-0.0013674	423.27450628077224	88.166	1.1012	88.615	88.059	89.16	0.44893					39	26	2	0	0	0	0.4196	1	10340	10340		51.335	0	1	280040			22140	10007	14942	14952	25501	25501					0.10971563282510033
KLSGLSIK	8	Unmodified	_KLSGLSIK_					0	0	0		ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	423.276378	844.538203	-1.1716	-0.00049593	-1.9084	-0.00080777	-3.08	-0.0013037	423.27551218486036	88.674	1.2674	88.674	88.205	89.472	0	0.16193	0.00098825	NaN	51.335	55	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	273870			22141	10007	14942	14952							0.10971563282510033
KLSGLSIK	8	Unmodified	_KLSGLSIK_					0	0	0		ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	423.276378	844.538203	-0.18555	-7.8539E-05	-2.9048	-0.0012295	-3.0904	-0.0013081	423.2750425914891	88.472	1.4637	88.54	88.137	89.6	0.068161	0.027718	0.0001447	NaN	51.335	76	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	539030			22142	10007	14942	14952							0.10971563282510033
KLSGLSIK	8	Unmodified	_KLSGLSIK_					0	0	0		ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	423.276378	844.538203	1.1466	0.00048532	-4.2853	-0.0018139	-3.1387	-0.0013285	423.2744689414417	88.498	1.971	88.424	87.899	89.87	-0.074005	-0.087772	-0.0010239	NaN	51.335	89	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	785230			22143	10007	14942	14952							0.10971563282510033
KLSGLSIK	8	Unmodified	_KLSGLSIK_					0	0	0		ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	423.276378	844.538203	2.8274	0.0011968	-6.0154	-0.0025462	-3.188	-0.0013494	423.2737195552257	88.315	1.9343	88.365	87.726	89.66	0.050415	-0.14701	-0.0024885	NaN	51.335	83	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	812420			22144	10007	14942	14952							0.10971563282510033
KLSGLSIK	8	Unmodified	_KLSGLSIK_					0	0	0		ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	423.276378	844.538203	-1.7421	-0.00073738	-1.2762	-0.00054018	-3.0183	-0.0012776	423.275703232744	88.268	1.3202	88.474	87.891	89.211	0.20515	-0.038509	0.0015234	NaN	51.335	71	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	477150			22145	10007	14942	14952							0.10971563282510033
KLSGLSIK	8	Unmodified	_KLSGLSIK_					0	0	0		ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	423.276378	844.538203	0.62247	0.00026347	-3.8186	-0.0016163	-3.1961	-0.0013528	423.2746414272695	88.338	1.0665	88.488	88.071	89.138	0.15055	-0.023997	-0.00062887	NaN	51.335	57	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410220			22146	10007	14942	14952							0.10971563282510033
KLSGLSIK	8	Unmodified	_KLSGLSIK_					0	0	0		ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	ENST00000318238.8_1_7:92763540-92763603:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	423.276378	844.538203	-1.8715	-0.00079214	-1.2651	-0.00053549	-3.1366	-0.0013276	423.2757734835511	88.286	1.6456	88.455	87.998	89.643	0.16923	-0.056696	0.0015328	NaN	51.335	63	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	278750			22147	10007	14942	14952							0.10971563282510033
KLSGLTSTL	9	Unmodified	_KLSGLTSTL_					0	0	0		ENST00000561720.5_1_16:58529427-58541082:+|nuORF;nc|ENSG00000103034|Q9ULP0-4|NDRG4;nc|ENSG00000103034|Q9ULP0-2|NDRG4;ENSG00000103034|ENST00000570248|NDRG4;nc|ENSG00000103034|Q9ULP0-8|NDRG4;nc|ENSG00000103034|Q9ULP0-5|NDRG4;nc|ENSG00000103034|Q9ULP0-7|NDRG4;nc|ENSG00000103034|Q9ULP0-3|NDRG4;nc|ENSG00000103034|Q9ULP0-6|NDRG4;ENST00000565981.5_1_16:58539993-58546041:+|nuORF	ENST00000561720.5_1_16:58529427-58541082:+|nuORF	ENST00000561720.5_1_16:58529427-58541082:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.2527770996094	2	460.276575	918.538597	-1.4612	-0.00067254	-1.1599	-0.00053387	-2.6211	-0.0012064	460.2736893353903	47.999	1.6968	48.469	47.894	49.591	0.46941					70	42	3	0	0	0	0.20789	1	4687	4687		26.693	10.22	1	507820			22148	2043	14943	14953	25502	25502					0.07606938211711167
KLSHKNLILSV	11	Unmodified	_KLSHKNLILSV_					0	0	0			REV__ENST00000307333.7_1_4:80975433-80976353:-|nuORF	REV__ENST00000307333.7_1_4:80975433-80976353:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.391357421875	2	626.392805	1250.77106	2.3084	0.0014459	4.3102	0.0026999	6.6186	0.0041458	626.3953217408156	109.92	1.4097	109.98	109.55	110.95	0.06794					99	57	2	0	0	0	0.7144	1	13345	13345		29.17	0	1	615360	+		22149	24842	14944	14954	25503	25503					0.15570200282309088
KLSHLIVGYSL	11	Unmodified	_KLSHLIVGYSL_					0	0	0			REV__ENSG00000181958|ENST00000641526|OR4A15	REV__ENSG00000181958|ENST00000641526|OR4A15	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	615.3654174804688	2	615.366256	1228.71796	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.036	1	79.446	78.946	79.946	0.4106								0	0	0	0.56276	1	9041	9041		51.528	0	1		+		22150	22490	14945	14955	25504	25504					0.11274822499672155
KLSIPQITTKH	11	Unmodified	_KLSIPQITTKH_					0	0	0		nc|ENSG00000243137|Q00888-3|PSG4;nc|ENSG00000243137|Q00888-2|PSG4;ENSG00000243137|ENST00000405312|PSG4;ENST00000597349.1_1_19:43698456-43699159:-|nuORF;ENST00000490769.1_1_19:43697526-43698852:-|nuORF;ENSG00000204941|ENST00000342951|PSG5;ENSG00000221878|ENST00000406070|PSG7	nc|ENSG00000243137|Q00888-3|PSG4;ENSG00000204941|ENST00000342951|PSG5;ENSG00000221878|ENST00000406070|PSG7	ENSG00000204941|ENST00000342951|PSG5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5924377441406	3	422.590717	1264.75032	2.1003	0.00088759	2.5397	0.0010733	4.6401	0.0019609	422.59169327867005	49.208	2.7795	49.208	47.99	50.769	0.00016785					227	65	5	0	0	0	0.69331	1	4191	4191		32.616	2.0469	1	2361900			22151	8499;15281;8676	14946	14956	25505	25505					0.1285360990261779
KLSIPQITTKH	11	Unmodified	_KLSIPQITTKH_					0	0	0		nc|ENSG00000243137|Q00888-3|PSG4;nc|ENSG00000243137|Q00888-2|PSG4;ENSG00000243137|ENST00000405312|PSG4;ENST00000597349.1_1_19:43698456-43699159:-|nuORF;ENST00000490769.1_1_19:43697526-43698852:-|nuORF;ENSG00000204941|ENST00000342951|PSG5;ENSG00000221878|ENST00000406070|PSG7	nc|ENSG00000243137|Q00888-3|PSG4;ENSG00000204941|ENST00000342951|PSG5;ENSG00000221878|ENST00000406070|PSG7	ENSG00000204941|ENST00000342951|PSG5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5925598144531	3	422.590717	1264.75032	0.27263	0.00011521	4.3666	0.0018453	4.6392	0.0019605	422.5924825344156	49.575	1.8502	49.617	48.754	50.604	0.04224					166	47	4	0	0	0	0.74002	1	3899	3899		24.276	0.89802	1	2165700			22152	8499;15281;8676	14946	14956	25506	25506					0.1285360990261779
KLSKKWLSLI	10	Unmodified	_KLSKKWLSLI_					0	0	0			REV__ENST00000210313.7_1_9:123586867-123586948:-|nuORF	REV__ENST00000210313.7_1_9:123586867-123586948:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.6784973144531	3	405.932303	1214.77508	0.40398	0.00016399	4.3119	0.0017503	4.7158	0.0019143	406.26866932068754	64.182	0.31244	64.306	64.152	64.464	0.12397					15	12	2	0	0	0	0.37624	1	5637	5637		7.0187	1.3199	1	34223	+		22153	24111	14947	14957	25507	25507					0.17628289776030215
KLSKKWLSLI	10	Unmodified	_KLSKKWLSLI_					0	0	0			REV__ENST00000210313.7_1_9:123586867-123586948:-|nuORF	REV__ENST00000210313.7_1_9:123586867-123586948:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	405.932303	1214.77508	1.5934	0.0006468	3.0523	0.001239	4.6457	0.0018858	405.9337681844732	64.341	0.16003	64.368	64.246	64.406	0.027138	0.030862	-0.00098114	NaN	7.0187	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24175	+		22154	24111	14947	14957							0.17628289776030215
KLSKQTRTT	9	Unmodified	_KLSKQTRTT_					0	0	0		ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.817138671875	2	531.81693	1061.61931	1.0296	0.00054754	-1.136	-0.00060416	-0.10647	-5.6623E-05	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.78983	1	8691	8691		27.882	1.1893	1	1241100			22155	6969	14948	14958	25508	25508					0.0909621925461579
KLSLRFAPAM	10	Unmodified	_KLSLRFAPAM_					0	0	0			REV__ENST00000598010.5_1_19:4307947-4318394:+|nuORF	REV__ENST00000598010.5_1_19:4307947-4318394:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.328857421875	2	567.328619	1132.64269	1.497	0.00084932	0.52822	0.00029968	2.0253	0.001149	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.86718	1	9983	9983		27.882	0	1	15259000	+		22156	17521	14949	14959	25509	25509					0.08166941767558455
KLSLRLMMI	9	Unmodified	_KLSLRLMMI_					0	0	0			REV__ENST00000356970.6_2_1:109486615-109490255:-|nuORF	REV__ENST00000356970.6_2_1:109486615-109490255:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3363037109375	2	552.835223	1103.65589	-1.299	-0.00071813	-1.0767	-0.00059522	-2.3757	-0.0013134	552.8347210563574	83.7	2.6246	83.838	82.553	85.177	0.13811					95	60	2	0	0	0	0.7932	1	8023	8023		25.45	2.4077	1	186100	+		22157	25398	14950	14960	25510	25510					0.10821056555300856
KLSNTPTLQPT	11	Unmodified	_KLSNTPTLQPT_					0	0	0			REV__ENSG00000006432|ENST00000554752|MAP3K9	REV__ENSG00000006432|ENST00000554752|MAP3K9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.55859375	3	400.559194	1198.65575	-0.4013	-0.00016075	-1.3392	-0.00053643	-1.7405	-0.00069718	400.55857592859013	19.576	0.65935	19.502	19.226	19.886	-0.073704					41	18	3	0	0	0	0.60058	1	442	442		32.034	0	1	413560	+		22158	16101	14951	14961	25511	25511					0.06437051360649093
KLSPARGLSN	10	Unmodified	_KLSPARGLSN_					0	0	0			REV__ENSG00000006283|ENST00000359106|CACNA1G	REV__ENSG00000006283|ENST00000359106|CACNA1G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.8049926757812	2	521.803823	1041.59309	-0.11311	-5.9022E-05	4.3887	0.00229	4.2756	0.002231	521.8059245005005	44.852	1.3013	45.315	44.578	45.88	0.46313					77	31	3	0	0	0	0.73395	1	4066	4066		42.864	3.8428	1	1090800	+		22159	16099	14952	14962	25512	25512					0.07395950083150638
KLSPPRPKKT	10	Unmodified	_KLSPPRPKKT_					0	0	0			REV__nc|ENSG00000138162|O95359-6|TACC2	REV__nc|ENSG00000138162|O95359-6|TACC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	576.3701171875	2	576.36659	1150.71863	-0.95493	-0.00055039	4.4007	0.0025364	3.4458	0.001986	576.3689207411744	41.362	1.2441	41.321	40.856	42.1	-0.04081					57	32	2	0	0	0	0.85834	1	3086	3086		22.58	2.5829	1	219690	+		22160	19446	14953	14963	25513	25513					0.14929661939368088
KLSRFARNK	9	Unmodified	_KLSRFARNK_					0	0	0		ENSG00000158220|ENST00000389567|ESYT3;ENST00000486831.5_1_3:138153640-138188991:+|nuORF	ENSG00000158220|ENST00000389567|ESYT3	ENSG00000158220|ENST00000389567|ESYT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402099609375	2	560.340907	1118.66726	-1.4184	-0.00079481	0.068089	3.8153E-05	-1.3504	-0.00075666	560.3408991920513	102.18	3.487	102.32	101.71	105.2	0.13569					387	86	7	0	0	0	0.7932	1	10631	10631		20.947	0.95016	1	120110000			22161	5467	14954	14964	25514	25514					0.11267337965296065
KLSRITVP	8	Unmodified	_KLSRITVP_					0	0	0			REV__ENST00000296292.7_1_3:53125644-53125815:-|nuORF	REV__ENST00000296292.7_1_3:53125644-53125815:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7915954589844	2	457.295102	912.575651	-1.786	-0.00081673	0.63753	0.00029154	-1.1485	-0.00052519	457.29543074910816	45.316	1.779	45.316	44.241	46.02	0					62	43	2	0	0	0	0.4196	1	3217	3217		47.657	6.8792	1	86397	+		22162	24708	14955	14965	25515	25515					0.11586654548125352
KLSRLWLNGLL	11	Unmodified	_KLSRLWLNGLL_					0	0	0			REV__ENSG00000137809|ENST00000315757|ITGA11	REV__ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2731018066406	3	438.27484	1311.80269	-1.8129	-0.00079457	-2.4695	-0.0010823	-4.2824	-0.0018769	438.2736679941031	107.15	1.2018	107.19	106.63	107.83	0.036118					118	28	5	0	0	0	0.74771	1	11397	11397		22.562	2.9347	1	2816400	+		22163	19409	14956	14966	25516	25516					0.1592619303628453
KLSRPPKASS	10	Unmodified	_KLSRPPKASS_					0	0	0		ENST00000589420.1_1_18:32821016-32837899:+|nuORF;nc|ENSG00000186812|Q8NF99-2|ZNF397	ENST00000589420.1_1_18:32821016-32837899:+|nuORF	ENST00000589420.1_1_18:32821016-32837899:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	535.8134765625	2	535.819473	1069.62439	-1.4984	-0.00080286	-2.3777	-0.001274	-3.876	-0.0020769	535.8186242164743	99.127	1.4411	99.313	98.898	100.34	0.18582					51	33	2	0	0	0	0.86763	1	10283	10283		26.693	6.6961	1	393170			22164	14237	14957	14967	25517	25517					0.09236523117237994
KLSRVALSNEK	11	Unmodified	_KLSRVALSNEK_					0	0	0			REV__nc|ENSG00000204217|Q13873-2|BMPR2	REV__nc|ENSG00000204217|Q13873-2|BMPR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.2596740722656	3	415.582221	1243.72483	0.17791	7.3937E-05	3.89	0.0016166	4.0679	0.0016905	415.5837748492553	27.541	0.43519	27.402	27.186	27.621	-0.13912					14	9	2	0	0	0	0.17536	1	1580	1580		32.034	9.4725	1	67955	+		22165	23470	14958	14968	25518	25518					0.11272135380227155
KLSSHVLLQ	9	Unmodified	_KLSSHVLLQ_					0	0	0			REV__ENST00000337386.9_2_2:191548524-191550217:+|nuORF	REV__ENST00000337386.9_2_2:191548524-191550217:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.8085327148438	2	512.811116	1023.60768	-0.31997	-0.00016408	0.65577	0.00033629	0.3358	0.0001722	512.8110471997029	27.79	1.2113	27.693	27.049	28.261	-0.096947					56	27	3	0	0	0	0.64555	1	1663	1663		44.377	0	1	288750	+		22166	25205	14959	14969	25519	25519					0.09682022231288556
KLSSIIEVP	9	Unmodified	_KLSSIIEVP_					0	0	0		nc|ENSG00000269335|Q9Y6K9-2|IKBKG	nc|ENSG00000269335|Q9Y6K9-2|IKBKG	nc|ENSG00000269335|Q9Y6K9-2|IKBKG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.2987365722656	2	493.30005	984.585547	0.15761	7.7751E-05	-2.6549	-0.0013097	-2.4973	-0.0012319	493.2984788281329	16.5	0.53093	15.901	15.74	16.271	-0.59873					21	11	4	0	0	0	0.67345	1	150	150		42.396	6.7778	1	687420			22167	15310	14960	14970	25520	25520					0.09263797762855575
KLSSPTTP	8	Unmodified	_KLSSPTTP_					0	0	0		nc|ENSG00000133454|Q8IUG5-2|MYO18B;ENSG00000133454|ENST00000335473|MYO18B;nc|ENSG00000133454|Q8IUG5-3|MYO18B	nc|ENSG00000133454|Q8IUG5-2|MYO18B	nc|ENSG00000133454|Q8IUG5-2|MYO18B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.6034240722656	2	415.734543	829.454533	1.2462	0.00051809	0.37584	0.00015625	1.6221	0.00067434	415.73459709371576	27.775	0.9419	27.52	27.034	27.976	-0.25465					37	21	3	0	0	0	0.4196	1	1694	1694		39.253	11.371	1	155210			22168	3879	14961	14971	25521	25521					0.03298407114800739
KLSTGNFFKII	11	Unmodified	_KLSTGNFFKII_					0	0	0			REV__nc|ENSG00000141258|O43147-5|SGSM2	REV__nc|ENSG00000141258|O43147-5|SGSM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3755493164062	2	634.374081	1266.73361	0.9338	0.00059238	3.7061	0.0023511	4.6399	0.0029435	634.376227424202	109.98	1.2195	110.05	109.76	110.98	0.073685					116	43	3	0	0	0	0.72918	1	11857	11857		26.693	4.1133	1	11835000	+		22169	29894	14962	14972	25522	25522					0.11091109016706469
KLSTIHKRPN	10	Unmodified	_KLSTIHKRPN_					0	0	0			REV__ENST00000507549.7_1_5:69717595-69723542:+|nuORF	REV__ENST00000507549.7_1_5:69717595-69723542:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.3584594726562	2	597.359296	1192.70404	-0.56757	-0.00033904	-1.0155	-0.00060663	-1.5831	-0.00094568	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.86272	1	10730	10730		24.519	0.31644	1	3951300	+		22170	19964	14963	14973	25523	25523					0.11539589791232174
KLSTIHKRPN	10	Unmodified	_KLSTIHKRPN_					0	0	0			REV__ENST00000507549.7_1_5:69717595-69723542:+|nuORF	REV__ENST00000507549.7_1_5:69717595-69723542:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.361328125	2	597.359296	1192.70404	0.94282	0.0005632	-2.9089	-0.0017377	-1.9661	-0.0011744	597.3571269689473	100.1	2.8225	100.31	99.04	101.86	0.21512					167	67	4	0	0	0	0.86047	1	10541	10541		23.523	0.94304	1	2588300	+		22171	19964	14963	14973	25524	25524					0.11539589791232174
KLSTILNRS	9	Unmodified	_KLSTILNRS_					0	0	0			REV__ENSG00000159708|ENST00000329956|LRRC36	REV__ENSG00000159708|ENST00000329956|LRRC36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.8146362304688	2	516.314023	1030.61349	0.86902	0.00044869	-0.81375	-0.00042015	0.055274	2.8539E-05	516.3134632199627	112.89	2.8792	112.91	112.73	115.61	0.028854					110	77	2	0	0	0	0.78983	1	12430	12430		27.882	0	1	336880	+		22172	20675	14964	14974	25525	25525					0.09941120742928433
KLSVPAFASSL	11	Unmodified	_KLSVPAFASSL_					0	0	0		nc|ENSG00000103423|Q96EY1-2|DNAJA3;ENSG00000103423|ENST00000262375|DNAJA3;ENST00000572974.1_1_16:4475882-4481706:+|nuORF	nc|ENSG00000103423|Q96EY1-2|DNAJA3	nc|ENSG00000103423|Q96EY1-2|DNAJA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.2717895507812	2	560.324057	1118.63356	0.49724	0.00027861	-0.079165	-4.4358E-05	0.41807	0.00023426	560.3239783126371	49.634	0.48959	50.093	49.665	50.155	0.45983					15	11	2	0	0	0	0.17415	1	4785	4785		33.922	8.7956	1	118360			22173	2082	14965	14975	25526	25526					0.07898871682891695
KLTDAQILTR	10	Unmodified	_KLTDAQILTR_					0	0	0		nc|ENSG00000049541|P35250-2|RFC2;ENSG00000049541|ENST00000055077|RFC2	nc|ENSG00000049541|P35250-2|RFC2	nc|ENSG00000049541|P35250-2|RFC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.84375	2	579.845687	1157.67682	-0.90191	-0.00052297	-1.7617	-0.0010215	-2.6636	-0.0015445	579.8446027793001	102.43	1.6108	102.45	102.08	103.69	0.01989					83	39	4	0	0	0	0.86471	1	11007	11007		30.318	2.4355	1	1265800			22174	987	14966	14976	25527	25527					0.10429061460149569
KLTDFGFSNK	10	Unmodified	_KLTDFGFSNK_					0	0	0		ENSG00000163788|ENST00000296088|SNRK;nc|ENSG00000163788|Q9NRH2-2|SNRK;ENST00000462810.1_1_3:43344695-43373803:+|nuORF	ENSG00000163788|ENST00000296088|SNRK	ENSG00000163788|ENST00000296088|SNRK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.8027954101562	2	578.803488	1155.59242	-1.5741	-0.00091107	1.112	0.00064363	-0.46205	-0.00026743	578.8039175091437	45.128	0.53473	45.591	45.304	45.839	0.46313					28	12	3	0	0	0	0.30286	1	4175	4175		72.243	20.908	1	719960			22175	5863	14967	14977	25528	25528					0.020851106434292888
KLTDFGFSNK	10	Unmodified	_KLTDFGFSNK_					0	0	0		ENSG00000163788|ENST00000296088|SNRK;nc|ENSG00000163788|Q9NRH2-2|SNRK;ENST00000462810.1_1_3:43344695-43373803:+|nuORF	ENSG00000163788|ENST00000296088|SNRK	ENSG00000163788|ENST00000296088|SNRK	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	578.803488	1155.59242	-1.7129	-0.00099143	1.12	0.00064828	-0.59286	-0.00034315	578.8038541441377	44.831	0.57603	45.676	45.419	45.995	0.84438	0.04248	4.5401E-06	NaN	72.243	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	621550			22176	5863	14967	14977							0.020851106434292888
KLTDLLFKYI	10	Unmodified	_KLTDLLFKYI_					0	0	0			REV__ENST00000520623.5_1_8:27348689-27396319:+|nuORF	REV__ENST00000520623.5_1_8:27348689-27396319:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.38525390625	2	627.378832	1252.74311	0.9795	0.00061452	4.2538	0.0026687	5.2333	0.0032833	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.86272	1	12891	12891		24.519	0.99649	1	19815000	+		22177	18438	14968	14978	25529	25529					0.12684877302240238
KLTEIPVPSKK	11	Unmodified	_KLTEIPVPSKK_					0	0	0			REV__ENST00000392686.6_1_3:178977460-178977592:-|nuORF	REV__ENST00000392686.6_1_3:178977460-178977592:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	620.8377685546875	2	620.387188	1238.75982	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.093	1	72.134	71.634	72.634	0.040222								0	0	0	0.56276	1	6929	6929		20.837	0.84038	1		+		22178	26026	14969	14979	25530	25530					0.1499937818816761
KLTGPPLF	8	Unmodified	_KLTGPPLF_					0	0	0			REV__ENST00000548760.2_1_12:98908993-98909089:-|nuORF	REV__ENST00000548760.2_1_12:98908993-98909089:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.7292175292969	2	436.765646	871.516739	-0.35586	-0.00015543	-3.4646	-0.0015132	-3.8204	-0.0016686	436.7638852040378	26.362	1.501	26.324	25.89	27.391	-0.038525					58	34	3	0	0	0	0.4196	1	1188	1188		23.042	0	1	147430	+		22179	28578	14970	14980	25531	25531					0.07584178253796381
KLTKIIQKL	9	Unmodified	_KLTKIIQKL_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	543.3057861328125	2	542.876259	1083.73797	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.511	1	21.511	21.011	22.011	0								0	0	0	0.33676	1	584	584		18.324	4.1873	1				22180	7747	14971	14981	25532	25532					0.19944618230260858
KLTLHHLLTY	10	Unmodified	_KLTLHHLLTY_					0	0	0		nc|ENSG00000089505|Q8IZ96-12|CMTM1	nc|ENSG00000089505|Q8IZ96-12|CMTM1	nc|ENSG00000089505|Q8IZ96-12|CMTM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8692626953125	2	619.866423	1237.71829	1.2649	0.00078404	3.424	0.0021224	4.6888	0.0029065	619.86841143733	93.879	2.9041	94.108	92.241	95.145	0.22863					217	69	4	0	0	0	0.8608	1	9703	9703		34.173	11.13	1	2572300			22181	14796	14972	14982	25533	25533					0.1089424221952413
KLTLSEGH	8	Unmodified	_KLTLSEGH_					0	0	0		nc|ENSG00000106772|Q8WUY3-4|PRUNE2;ENSG00000106772|ENST00000376718|PRUNE2;nc|ENSG00000106772|Q8WUY3-2|PRUNE2;nc|ENSG00000106772|Q8WUY3-3|PRUNE2	nc|ENSG00000106772|Q8WUY3-4|PRUNE2	nc|ENSG00000106772|Q8WUY3-4|PRUNE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7449035644531	2	442.745442	883.476331	-1.2184	-0.00053945	-0.16486	-7.2993E-05	-1.3833	-0.00061244	442.74523759961534	89.283	0.76672	89.754	89.476	90.243	0.47068					54	18	4	0	0	0	0.90465	1	10560	10560		40.573	1.7665	1	4305700			22182	2317	14973	14983	25534	25534					0.029932118633723803
KLTLSQKVFS	10	Unmodified	_KLTLSQKVFS_					0	0	0		ENSG00000135569|ENST00000258034|TAAR5	ENSG00000135569|ENST00000258034|TAAR5	ENSG00000135569|ENST00000258034|TAAR5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8428955078125	2	575.845156	1149.67576	-1.368	-0.00078774	-2.3653	-0.001362	-3.7333	-0.0021498	575.8436459594299	90.372	2.9394	90.548	88.581	91.52	0.1758					221	69	4	0	0	0	0.85633	1	8875	8875		21.686	0.8486	1	2135900			22183	4035	14974	14984	25535	25535					0.10690847091291289
KLTLVAPP	8	Unmodified	_KLTLVAPP_					0	0	0		nc|ENSG00000118900|Q9NPG3-2|UBN1;ENSG00000118900|ENST00000262376|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7749328613281	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.89457	2	3252	3252;3277		38.806	1.8278	1	10965000			22184	3048	14975	14985	25536;25537	25536					0.1071246477083605
KLTLVAPP	8	Unmodified	_KLTLVAPP_					0	0	0		nc|ENSG00000118900|Q9NPG3-2|UBN1;ENSG00000118900|ENST00000262376|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.775390625	2	419.773471	837.53239	-0.10078	-4.2304E-05	4.0424	0.0016969	3.9416	0.0016546	419.7750685002772	52.128	2.0035	52.125	51.055	53.058	-0.0020447					75	49	2	0	0	0	0.85277	1	4472	4472		25.45	1.2474	1	171040			22185	3048	14975	14985	25538	25538					0.1071246477083605
KLTLVAPP	8	Unmodified	_KLTLVAPP_					0	0	0		nc|ENSG00000118900|Q9NPG3-2|UBN1;ENSG00000118900|ENST00000262376|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7748107910156	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.89457	1	3366	3366		37.028	1.8278	1	11423000			22186	3048	14975	14985	25539	25539					0.1071246477083605
KLTLVAPP	8	Unmodified	_KLTLVAPP_					0	0	0		nc|ENSG00000118900|Q9NPG3-2|UBN1;ENSG00000118900|ENST00000262376|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77496337890625	2	419.773471	837.53239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.97	1	51.947	51.447	52.447	-0.02343								0	0	0	0.29816	1	4573	4573		38.806	8.3025	1				22187	3048	14975	14985	25540	25540					0.1071246477083605
KLTLVAPP	8	Unmodified	_KLTLVAPP_					0	0	0		nc|ENSG00000118900|Q9NPG3-2|UBN1;ENSG00000118900|ENST00000262376|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7749938964844	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.86791	1	3302	3302		28.254	2.8041	1	10266000			22188	3048	14975	14985	25541	25541					0.1071246477083605
KLTLVAPP	8	Unmodified	_KLTLVAPP_					0	0	0		nc|ENSG00000118900|Q9NPG3-2|UBN1;ENSG00000118900|ENST00000262376|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7743225097656	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.86288	1	2765	2765		26.796	2.5934	1	10440000			22189	3048	14975	14985	25542	25542					0.1071246477083605
KLTLVAPP	8	Unmodified	_KLTLVAPP_					0	0	0		nc|ENSG00000118900|Q9NPG3-2|UBN1;ENSG00000118900|ENST00000262376|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7751770019531	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.884	1	2943	2943		33.516	8.0654	1	9723800			22190	3048	14975	14985	25543	25543					0.1071246477083605
KLTPFVRKM	9	Unmodified	_KLTPFVRKM_					0	0	0			REV__ENST00000444388.5_1_22:27068741-27068789:+|nuORF	REV__ENST00000444388.5_1_22:27068741-27068789:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.340576171875	2	560.338987	1118.66342	-1.4185	-0.00079484	3.8922	0.0021809	2.4736	0.0013861	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.78536	1	12668	12668		29.15	2.4566	1	4071000	+		22191	26787	14976	14986	25544	25544					0.10883532147249753
KLTRHGTT	8	Unmodified	_KLTRHGTT_					0	0	0			REV__nc|ENSG00000167113|Q9Y3A0-2|COQ4	REV__nc|ENSG00000167113|Q9Y3A0-2|COQ4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2631530761719	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.86677	1	7998	7998		27.882	3.6795	1	2957200	+		22192	21356	14977	14987	25545	25545					0.054357228488470355
KLTRHGTT	8	Unmodified	_KLTRHGTT_					0	0	0			REV__nc|ENSG00000167113|Q9Y3A0-2|COQ4	REV__nc|ENSG00000167113|Q9Y3A0-2|COQ4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2638244628906	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.87479	2	8436	8314;8436		40.573	7.057	1	4511100	+		22193	21356	14977	14987	25546;25547	25547					0.054357228488470355
KLTRHGTT	8	Unmodified	_KLTRHGTT_					0	0	0			REV__nc|ENSG00000167113|Q9Y3A0-2|COQ4	REV__nc|ENSG00000167113|Q9Y3A0-2|COQ4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2633972167969	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.87479	1	8220	8220		30.504	1.3541	1	4732500	+		22194	21356	14977	14987	25548	25548					0.054357228488470355
KLTRHGTT	8	Unmodified	_KLTRHGTT_					0	0	0			REV__nc|ENSG00000167113|Q9Y3A0-2|COQ4	REV__nc|ENSG00000167113|Q9Y3A0-2|COQ4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2637023925781	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.84341	1	8104	8104		24.203	0	1	4597500	+		22195	21356	14977	14987	25549	25549					0.054357228488470355
KLTRRLSKR	9	Unmodified	_KLTRRLSKR_					0	0	0			REV__ENSG00000135723|ENST00000258201|FHOD1	REV__ENSG00000135723|ENST00000258201|FHOD1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.350830078125	2	579.383106	1156.75166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.94	1	107.98	107.48	108.48	0.035622								0	0	0	0.32758	1	11870	11870		20.947	7.9877	1		+		22196	19242	14978	14988	25550	25550					0.1795528878208188
KLTSGKYSM	9	Oxidation (M)	_KLTSGKYSM(Oxidation (M))_		KLTSGKYSM(1)		KLTSGKYSM(66)	0	0	1			REV__nc|ENSG00000217128|Q8TF40-3|FNIP1;REV__ENSG00000052795|ENST00000264433|FNIP2	REV__nc|ENSG00000217128|Q8TF40-3|FNIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.7638549804688	2	515.765517	1029.51648	-0.15905	-8.2035E-05	-4.4479	-0.0022941	-4.607	-0.0023761	515.7628304303221	53.471	0.83606	54.085	53.737	54.573	0.61436					47	19	3	0	0	0	0.28163	1	5449	5449		66.429	8.618	1	2061300	+		22197	23697;16384	14979	14989	25551	25551		236			0.0029039047165042575
KLTSTTKP	8	Unmodified	_KLTSTTKP_					0	0	0			REV__nc|ENSG00000019144|Q86UU1-3|PHLDB1	REV__nc|ENSG00000019144|Q86UU1-3|PHLDB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2634582519531	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.8621	1	2772	2772		26.693	4.733	1	2862500	+		22198	16227	14980	14990	25552	25552					0.07010669040221273
KLTSTTKP	8	Unmodified	_KLTSTTKP_					0	0	0			REV__nc|ENSG00000019144|Q86UU1-3|PHLDB1	REV__nc|ENSG00000019144|Q86UU1-3|PHLDB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2626953125	2	438.263468	874.512382	0.27759	0.00012166	-1.0434	-0.00045727	-0.76577	-0.00033561	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.81184	1	2833	2833		19.997	0.6368	1	85249000	+		22199	16227	14980	14990	25553	25553					0.07010669040221273
KLTTIKFPTT	10	Unmodified	_KLTTIKFPTT_					0	0	0			REV__nc|ENSG00000116690|Q92954-5|PRG4	REV__nc|ENSG00000116690|Q92954-5|PRG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.34521484375	2	575.347532	1148.68051	-1.3696	-0.00078799	-2.033	-0.0011697	-3.4026	-0.0019577	575.3462227460456	98.573	2.415	98.769	98.2	100.61	0.19585					159	55	5	0	0	0	0.85259	1	10126	10126		20.03	0.92695	1	2256700	+		22200	18214	14981	14991	25554	25554					0.1121173123403878
KLTTVSGK	8	Unmodified	_KLTTVSGK_					0	0	0			REV__ENSG00000065526|ENST00000375759|SPEN	REV__ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.2582092285156	2	417.258185	832.501818	0.73077	0.00030492	0.058378	2.4359E-05	0.78915	0.00032928	417.25810331191536	21.663	2.6932	21.727	21.148	23.842	0.064745					160	99	2	0	0	0	0.80959	1	618	618		15.642	3.435	1	105380	+		22201	16503	14982	14992	25555	25555					0.07886686385813846
KLTVTHRTINL	11	Unmodified	_KLTVTHRTINL_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	647.8297729492188	2	648.393336	1294.77212	-1.2438	-0.00080648	2.2144	0.0014358	0.97061	0.00062934	648.3953887152069	39.382	0.50559	39.75	39.687	40.192	0.36797					13	11	2	0	0	0	0.17339	1	3302	3302		31.634	6.0602	1	396890	+		22202	20437;29946	14983	14993	25556	25556					0.1365241465125564
KLTYIYIQK	9	Unmodified	_KLTYIYIQK_					0	0	0		ENST00000383746.7_2_3:44396236-44396287:+|nuORF	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.8069458007812	2	585.350074	1168.6856	-1.3622	-0.00079735	-0.56216	-0.00032906	-1.9243	-0.0011264	585.3496186115639	43.906	0.92939	44.356	44.003	44.932	0.45025					61	22	4	0	0	0	0.20789	1	4015	4015		40.058	0	1	5245700			22203	10984	14984	14994	25557	25557					0.10800035096622196
KLTYIYIQK	9	Unmodified	_KLTYIYIQK_					0	0	0		ENST00000383746.7_2_3:44396236-44396287:+|nuORF	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	ENST00000383746.7_2_3:44396236-44396287:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.3450927734375	2	585.350074	1168.6856	-1.7565	-0.0010282	-0.50746	-0.00029704	-2.2639	-0.0013252	585.3496189135076	43.691	0.81291	44.465	44.183	44.996	0.77379					56	19	4	0	0	0	0.34325	1	3979	3979		61.691	0	1	5167400			22204	10984	14984	14994	25558	25558					0.10800035096622196
KLVACGPL	8	Unmodified	_KLVACGPL_					0	0	0			REV__ENSG00000180660|ENST00000379919|MAB21L1	REV__ENSG00000180660|ENST00000379919|MAB21L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.226318359375	2	400.738574	799.462595	1.9004	0.00076157	-4.3107	-0.0017274	-2.4102	-0.00096588	400.7369423204865	34.862	0.38929	35.072	34.854	35.244	0.21003					12	9	2	0	0	0	0.4196	1	2625	2625		13.775	0	1	123710	+		22205	22408	14985	14995	25559	25559					0.05484262830577791
KLVACGPL	8	Unmodified	_KLVACGPL_					0	0	0			REV__ENSG00000180660|ENST00000379919|MAB21L1	REV__ENSG00000180660|ENST00000379919|MAB21L1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	400.738574	799.462595	-1.9506	-0.0007817	-0.4592	-0.00018402	-2.4099	-0.00096572	400.7381667863673	35.293	0.55775	35.293	35.005	35.563	0	0.090498	0.00114	NaN	13.775	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44807	+		22206	22408	14985	14995							0.05484262830577791
KLVACGPL	8	Unmodified	_KLVACGPL_					0	0	0			REV__ENSG00000180660|ENST00000379919|MAB21L1	REV__ENSG00000180660|ENST00000379919|MAB21L1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	400.738574	799.462595	-1.9114	-0.00076596	-0.8395	-0.00033642	-2.7509	-0.0011024	400.73804087762767	35.26	0.48239	35.299	35.029	35.512	0.038643	0.096094	0.00083518	NaN	13.775	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98836	+		22207	22408	14985	14995							0.05484262830577791
KLVACGPL	8	Unmodified	_KLVACGPL_					0	0	0			REV__ENSG00000180660|ENST00000379919|MAB21L1	REV__ENSG00000180660|ENST00000379919|MAB21L1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	400.738574	799.462595	-0.049679	-1.9908E-05	-2.921	-0.0011706	-2.9707	-0.0011905	400.73727297302804	35.2	0.48523	35.144	34.878	35.363	-0.055149	-0.058283	-0.00083309	NaN	13.775	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102100	+		22208	22408	14985	14995							0.05484262830577791
KLVAKWKD	8	Unmodified	_KLVAKWKD_					0	0	0		nc|ENSG00000154743|Q8NCE0-5|TSEN2;nc|ENSG00000154743|Q8NCE0-4|TSEN2;nc|ENSG00000154743|Q8NCE0-3|TSEN2;nc|ENSG00000154743|Q8NCE0-2|TSEN2;ENSG00000154743|ENST00000284995|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	nc|ENSG00000154743|Q8NCE0-5|TSEN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30084228515625	2	494.302927	986.591301	-0.58723	-0.00029027	-3.936	-0.0019456	-4.5232	-0.0022358	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.86288	1	10280	10280		26.796	1.3459	1	65263000			22209	5293	14986	14996	25560	25560					0.09746941065168357
KLVAQRGTG	9	Unmodified	_KLVAQRGTG_					0	0	0			REV__ENST00000526058.1_1_11:66360677-66366729:+|nuORF	REV__ENST00000526058.1_1_11:66360677-66366729:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.2799072265625	2	465.279983	928.545414	-1.728	-0.00080402	1.7949	0.00083513	0.066852	3.1105E-05	465.28067924301723	88.748	2.0508	88.921	88.498	90.549	0.17234					103	47	4	0	0	0	0.7932	1	8808	8808		24.519	0.31644	1	1028800	+		22210	21967	14987	14997	25561	25561					0.07828295882950442
KLVFPVPLDA	10	Unmodified	_KLVFPVPLDA_					0	0	0		nc|ENSG00000003400|Q92851-6|CASP10;nc|ENSG00000003400|Q92851-2|CASP10;ENSG00000003400|ENST00000286186|CASP10	nc|ENSG00000003400|Q92851-6|CASP10	nc|ENSG00000003400|Q92851-6|CASP10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.8294067382812	2	549.831517	1097.64848	-1.8841	-0.0010359	0.84421	0.00046418	-1.0399	-0.00057174	549.8318502842114	43.044	0.97987	43.477	43.006	43.986	0.4334					53	23	4	0	0	0	0.5766	1	3892	3892		51.335	5.3632	1	3183100			22211	657	14988	14998	25562	25562					0.10356363550909009
KLVFSLRIMD	10	Unmodified	_KLVFSLRIMD_					0	0	0			REV__ENST00000464491.5_1_2:172180836-172182590:-|nuORF	REV__ENST00000464491.5_1_2:172180836-172182590:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.35498046875	2	611.354834	1220.69511	1.1383	0.00069592	0.67847	0.00041479	1.8168	0.0011107	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.63899	1	9492	9492		47.96	11.513	1	7316900	+		22212	27094	14989	14999	25563	25563					0.09359480110515506
KLVFSLRIMD	10	Unmodified	_KLVFSLRIMD_					0	0	0			REV__ENST00000464491.5_1_2:172180836-172182590:-|nuORF	REV__ENST00000464491.5_1_2:172180836-172182590:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.3558349609375	2	611.354834	1220.69511	0.93149	0.00056947	1.983	0.0012123	2.9145	0.0017818	611.3560842580883	95.783	3.9941	96.187	95.298	99.293	0.40451					337	97	4	0	0	0	0.86471	1	11502	11502		30.318	4.7437	1	11629000	+		22213	27094	14989	14999	25564	25564					0.09359480110515506
KLVGFIQMA	9	Unmodified	_KLVGFIQMA_					0	0	0			REV__ENST00000534547.1_1_11:130165680-130166253:+|nuORF	REV__ENST00000534547.1_1_11:130165680-130166253:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.786865234375	2	503.791338	1005.56812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.189	1	45.033	44.533	45.533	0.84438								0	0	0	0.30778	1	4054	4054		27.882	1.0861	1		+		22214	28369	14990	15000	25565	25565					0.06556178956191161
KLVGVKEKR	9	Unmodified	_KLVGVKEKR_					0	0	0			REV__L1MA3_dup7701|chr15:44349277-44351294:+|1.4292787336965462|0.1492014457220858|3.26|63.0|54|3|sense	REV__L1MA3_dup7701|chr15:44349277-44351294:+|1.4292787336965462|0.1492014457220858|3.26|63.0|54|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.8474731445312	2	528.848033	1055.68151	1.2561	0.00066428	-1.3944	-0.00073744	-0.13835	-7.3165E-05	528.8472126595447	20.225	0.64354	19.765	19.502	20.145	-0.4591					27	13	3	0	0	0	0.77244	1	616	616		32.812	1.2826	1	199250	+		22215	29477	14991	15001	25566	25566					0.15589990393596054
KLVGVKEKR	9	Unmodified	_KLVGVKEKR_					0	0	0			REV__L1MA3_dup7701|chr15:44349277-44351294:+|1.4292787336965462|0.1492014457220858|3.26|63.0|54|3|sense	REV__L1MA3_dup7701|chr15:44349277-44351294:+|1.4292787336965462|0.1492014457220858|3.26|63.0|54|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.8475341796875	2	528.848033	1055.68151	0.19379	0.00010249	-0.48897	-0.00025859	-0.29518	-0.00015611	528.8476755921713	20.367	0.49452	19.737	19.536	20.03	-0.6296					23	10	3	0	0	0	0.69624	1	651	651		40.778	5.1599	1	217580	+		22216	29477	14991	15001	25567	25567					0.15589990393596054
KLVINSLRHE	10	Unmodified	_KLVINSLRHE_					0	0	0			REV__ENST00000525964.6_1_11:134022841-134052943:-|nuORF	REV__ENST00000525964.6_1_11:134022841-134052943:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.8580322265625	2	604.859129	1207.70371	1.0196	0.00061673	-2.4004	-0.0014519	-1.3808	-0.00083518	604.8576899893071	82.698	1.1308	82.853	82.221	83.352	0.15473					67	26	3	0	0	0	0.85979	1	7947	7947		30.318	0	1	291410	+		22217	20255	14992	15002	25568	25568					0.10816170071393572
KLVIVAIII	9	Unmodified	_KLVIVAIII_					0	0	0		ENSG00000021488|ENST00000023064|SLC7A9	ENSG00000021488|ENST00000023064|SLC7A9	ENSG00000021488|ENST00000023064|SLC7A9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.77606201171875	2	491.357171	980.699789	-1.3093	-0.00064333	-1.1059	-0.00054337	-2.4151	-0.0011867	491.35644858694127	72.074	0.99963	72.46	71.959	72.958	0.38581					39	23	2	0	0	0	0.20789	1	7970	7970		3.9852	0	1	89911			22218	847	14993	15003	25569	25569					0.20866732315596437
KLVKNRILN	9	Unmodified	_KLVKNRILN_					0	0	0		nc|ENSG00000164327|Q6R327-3|RICTOR;ENSG00000164327|ENST00000357387|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	nc|ENSG00000164327|Q6R327-3|RICTOR	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3590698242188	2	549.361308	1096.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.719	1	44.731	44.231	45.231	0.012058								0	0	0	0.28386	1	3172	3172		37.159	2.9866	1				22219	15058	14994	15004	25570	25570					0.16357679284942606
KLVLFQGLV	9	Unmodified	_KLVLFQGLV_					0	0	0			REV__ENST00000420029.1_1_1:174726080-174726215:-|nuORF	REV__ENST00000420029.1_1_1:174726080-174726215:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.1688537597656	2	508.828778	1015.643	0.42742	0.00021748	-0.47364	-0.000241	-0.046221	-2.3519E-05	509.33023649959586	53.475	0.79493	54.089	53.778	54.573	0.61436					28	18	2	0	0	0	0.20789	1	5414	5414		45.952	13.14	1	157600	+		22220	22062	14995	15005	25571	25571					0.13580684759074302
KLVLHGRK	8	Unmodified	_KLVLHGRK_					0	0	0			REV__nc|ENSG00000161558|Q96AN5-2|TMEM143	REV__nc|ENSG00000161558|Q96AN5-2|TMEM143	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	475.3233337402344	2	475.816536	949.618519	0.10334	4.9171E-05	2.5784	0.0012269	2.6818	0.001276	475.81872239177187	38.459	1.0328	38.431	38.084	39.117	-0.027843					27	23	2	0	0	0	0.4196	1	2633	2633		1.0954	0	1	38605	+		22221	20768	14996	15006	25572	25572					0.1416946939623358
KLVLHGRK	8	Unmodified	_KLVLHGRK_					0	0	0			REV__nc|ENSG00000161558|Q96AN5-2|TMEM143	REV__nc|ENSG00000161558|Q96AN5-2|TMEM143	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	475.816536	949.618519	-0.87665	-0.00041713	1.6355	0.00077818	0.7588	0.00036105	475.81948894061816	37.717	0.7678	38.213	37.996	38.764	0.49605	-0.10878	-0.00064153	NaN	1.0954	26	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134530	+		22222	20768	14996	15006							0.1416946939623358
KLVLTCLAAS	10	Unmodified	_KLVLTCLAAS_					0	0	0			REV__CON__Q2KIF2	REV__CON__Q2KIF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8034973144531	2	509.801903	1017.58925	-0.38177	-0.00019462	3.8836	0.0019799	3.5019	0.0017853	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.8651	1	8148	8148		25.574	2.9944	1	948010	+	+	22223	16003	14997	15007	25573	25573					0.08116144265045477
KLVNVLIMM	9	Unmodified	_KLVNVLIMM_					0	0	0			REV__ENST00000370577.7_2_6:70459257-70462224:-|nuORF	REV__ENST00000370577.7_2_6:70459257-70462224:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8217163085938	2	530.816499	1059.61844	-0.81982	-0.00043517	4.2814	0.0022726	3.4615	0.0018374	531.3179945463662	84.982	1.0952	84.982	84.395	85.49	0					45	24	2	0	0	0	0.7932	1	8066	8066		26.796	2.2769	1	216850	+		22224	25658	14998	15008	25574	25574					0.09101965289710279
KLVQNPLQ	8	Unmodified	_KLVQNPLQ_					0	0	0			REV__ENST00000569223.1_1_15:42235208-42264692:-|nuORF	REV__ENST00000569223.1_1_15:42235208-42264692:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2555847167969	2	470.284734	938.554916	-1.1229	-0.00052809	1.2616	0.00059331	0.13868	6.5217E-05	470.28526118530374	30.239	0.57467	30.268	30.008	30.582	0.028618					22	12	3	0	0	0	0.4196	1	1982	1982		23.042	0	1	100560	+		22225	17430	14999	15009	25575	25575					0.08318064168463479
KLVRRHIKKVR	11	Unmodified	_KLVRRHIKKVR_					0	0	0			REV__chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	REV__chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.3258056640625	3	478.328161	1431.96265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.952	1	75.084	74.584	75.584	0.13208								0	0	0	0.56276	1	6954	6954		3.2113	1.8894	1		+		22226	15621	15000	15010	25576	25576					0.2639516582394208
KLVTANQQSA	10	Unmodified	_KLVTANQQSA_					0	0	0			REV__ENST00000427574.6_1_11:76156149-76164398:+|nuORF	REV__ENST00000427574.6_1_11:76156149-76164398:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.293212890625	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.8545	1	8751	8751		36.447	0.82846	1	1390700	+		22227	26566	15001	15011	25577	25577					0.04507939983614051
KLVTANQQSA	10	Unmodified	_KLVTANQQSA_					0	0	0			REV__ENST00000427574.6_1_11:76156149-76164398:+|nuORF	REV__ENST00000427574.6_1_11:76156149-76164398:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2936401367188	2	530.293288	1058.57202	-1.5163	-0.00080409	1.7205	0.00091237	0.2042	0.00010828	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.66675	1	9132	9132		46.457	6.3986	1	1686700	+		22228	26566	15001	15011	25578	25578					0.04507939983614051
KLVVPVGILLL	11	Unmodified	_KLVVPVGILLL_					0	0	0		ENST00000415947.1_1_2:205410861-205912470:+|nuORF	ENST00000415947.1_1_2:205410861-205912470:+|nuORF	ENST00000415947.1_1_2:205410861-205912470:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3541259765625	2	582.409935	1162.80532	-0.28468	-0.0001658	-3.6844	-0.0021458	-3.9691	-0.0023116	582.4072094962605	103.65	0.12123	103.65	103.56	103.68	0					4	2	2	0	0	0	0.18058	1	10635	10635		5.9211	0	1	74377			22229	11389	15002	15012	25579	25579					0.23042648441241909
KLWAPYQAK	9	Unmodified	_KLWAPYQAK_					0	0	0		ENST00000448183.6_1_6:11200558-11306280:-|nuORF	ENST00000448183.6_1_6:11200558-11306280:-|nuORF	ENST00000448183.6_1_6:11200558-11306280:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.8106079101562	2	552.813659	1103.61277	0.84573	0.00046753	-4.3231	-0.0023899	-3.4773	-0.0019223	552.8111137403027	28.325	0.86969	28.151	27.89	28.76	-0.17336					45	21	3	0	0	0	0.67345	1	1702	1702		42.396	1.618	1	373020			22230	11855	15003	15013	25580	25580					0.06510326093894037
KLWHTLLNLK	10	Unmodified	_KLWHTLLNLK_					0	0	0			REV__ENST00000492204.1_1_10:103552448-103553834:-|nuORF	REV__ENST00000492204.1_1_10:103552448-103553834:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5930480957031	3	422.595802	1264.76558	-1.6666	-0.00070429	-4.4715	-0.0018896	-6.1381	-0.0025939	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.86151	1	4693	4693		15.333	1.2471	1	771770	+		22231	27670	15004	15014	25581	25581					0.14378521490493767
KLWNQLEAEI	10	Unmodified	_KLWNQLEAEI_					0	0	0		nc|ENSG00000047932|Q9HD26-3|GOPC;ENSG00000047932|ENST00000368498|GOPC;nc|ENSG00000047932|Q9HD26-2|GOPC	nc|ENSG00000047932|Q9HD26-3|GOPC	nc|ENSG00000047932|Q9HD26-3|GOPC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3363037109375	2	622.337695	1242.66084	-0.27733	-0.0001726	-1.9307	-0.0012016	-2.208	-0.0013741	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.8651	1	12068	12068		25.574	1.0549	1	419280			22232	970	15005	15015	25582	25582					0.0492135522326862
KLYCERQLQ	9	Unmodified	_KLYCERQLQ_					0	0	0			REV__ENSG00000113739|ENST00000265087|STC2	REV__ENSG00000113739|ENST00000265087|STC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8087768554688	2	590.81079	1179.60703	-0.64683	-0.00038215	-2.809	-0.0016596	-3.4559	-0.0020418	590.8091423509106	59.998	1.5026	59.984	59.286	60.789	-0.013729					96	38	3	0	0	0	0.15959	1	5506	5506		82.241	2.5279	1	6218400	+		22233	18012	15006	15016	25583	25583					0.02440859519924743
KLYCERQLQ	9	Unmodified	_KLYCERQLQ_					0	0	0			REV__ENSG00000113739|ENST00000265087|STC2	REV__ENSG00000113739|ENST00000265087|STC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8092651367188	2	590.81079	1179.60703	-2.5816	-0.0015252	-0.69084	-0.00040815	-3.2724	-0.0019334	590.810388094793	59.822	1.6947	59.855	59.336	61.031	0.032822					113	47	3	0	0	0	0.096131	1	5512	5512		93.195	5.4412	1	6301700	+		22234	18012	15006	15016	25584	25584					0.02440859519924743
KLYCERQLQ	9	Unmodified	_KLYCERQLQ_					0	0	0			REV__ENSG00000113739|ENST00000265087|STC2	REV__ENSG00000113739|ENST00000265087|STC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.80908203125	2	590.81079	1179.60703	0.522	0.0003084	-3.4822	-0.0020574	-2.9603	-0.0017489	590.8087294350913	59.786	1.1886	59.902	59.476	60.664	0.11676					102	40	3	0	0	0	0.19818	1	5169	5169		74.255	4.6274	1	4726100	+		22235	18012	15006	15016	25585	25585					0.02440859519924743
KLYCERQLQ	9	Unmodified	_KLYCERQLQ_					0	0	0			REV__ENSG00000113739|ENST00000265087|STC2	REV__ENSG00000113739|ENST00000265087|STC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8092651367188	2	590.81079	1179.60703	-0.32322	-0.00019096	-2.5449	-0.0015035	-2.8681	-0.0016945	590.8092533729065	59.928	1.5542	59.928	59.528	61.083	0.00051117					123	53	3	0	0	0	0.14386	2	5184	5173;5184		84.916	8.1414	1	4758100	+		22236	18012	15006	15016	25586;25587	25587					0.02440859519924743
KLYCERQLQ	9	Unmodified	_KLYCERQLQ_					0	0	0			REV__ENSG00000113739|ENST00000265087|STC2	REV__ENSG00000113739|ENST00000265087|STC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8092041015625	2	590.81079	1179.60703	-1.4475	-0.00085521	-1.6233	-0.00095904	-3.0708	-0.0018143	590.8098678631684	57.766	1.8735	58.16	57.738	59.612	0.39408					109	45	3	0	0	0	0.18601	1	6013	6013		76.774	1.7308	1	12390000	+		22237	18012	15006	15016	25588	25588					0.02440859519924743
KLYCERQLQ	9	Unmodified	_KLYCERQLQ_					0	0	0			REV__ENSG00000113739|ENST00000265087|STC2	REV__ENSG00000113739|ENST00000265087|STC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8092651367188	2	590.81079	1179.60703	0.42073	0.00024857	-3.3903	-0.002003	-2.9696	-0.0017545	590.8087931973557	57.669	1.7305	58.224	57.808	59.538	0.55513					104	42	3	0	0	0	0.19818	1	6036	6036		74.255	2.3776	1	12960000	+		22238	18012	15006	15016	25589	25589					0.02440859519924743
KLYEQLSGK	9	Unmodified	_KLYEQLSGK_					0	0	0		ENSG00000089220|ENST00000261313|PEBP1;ENST00000542939.1_1_12:118576827-118582605:+|nuORF	ENSG00000089220|ENST00000261313|PEBP1	ENSG00000089220|ENST00000261313|PEBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.8017578125	2	533.300581	1064.58661	-0.46862	-0.00024992	0.32551	0.00017359	-0.14311	-7.6322E-05	533.3007266349649	31.256	2.7034	31.336	29.971	32.674	0.079834					123	61	4	0	0	0	0.54908	1	2093	2093		49.536	7.0616	1	663570			22239	1618	15007	15017	25590	25590					0.056900121317767116
KLYEQLSGK	9	Unmodified	_KLYEQLSGK_					0	0	0		ENSG00000089220|ENST00000261313|PEBP1;ENST00000542939.1_1_12:118576827-118582605:+|nuORF	ENSG00000089220|ENST00000261313|PEBP1	ENSG00000089220|ENST00000261313|PEBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.3006591796875	2	533.300581	1064.58661	0.1514	8.0741E-05	-0.40428	-0.0002156	-0.25288	-0.00013486	533.300326680182	31.208	2.416	31.212	29.926	32.342	0.0037212					110	55	4	0	0	0	0.0358	1	2117	2117		114.89	24.525	1	756110			22240	1618	15007	15017	25591	25591					0.056900121317767116
KLYGKALAPP	10	Unmodified	_KLYGKALAPP_					0	0	0			REV__ENST00000530761.5_1_11:117857521-117870353:+|nuORF	REV__ENST00000530761.5_1_11:117857521-117870353:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.3283081054688	2	529.32386	1056.63317	-1.2756	-0.00067522	0.53612	0.00028378	-0.7395	-0.00039143	529.3242135057714	44.073	0.53304	44.904	44.521	45.054	0.83179					23	12	3	0	0	0	0.37624	1	4049	4049		11.511	0	1	462380	+		22241	17808	15008	15018	25592	25592					0.10711496753697247
KLYKGGIIL	9	Unmodified	_KLYKGGIIL_					0	0	0			REV__ENST00000417796.1_1_9:84702837-84703236:-|nuORF	REV__ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	503.10760498046875	2	502.828778	1003.643	-0.58739	-0.00029536	-3.0329	-0.001525	-3.6203	-0.0018204	503.32868070283166	28.503	0.26026	28.572	28.356	28.617	0.068678					17	12	2	0	0	0	0.20789	1	1175	1175		24.203	0	1	44742	+		22242	26450	15009	15019	25593	25593					0.1413268475911309
KLYPQLPA	8	Unmodified	_KLYPQLPA_					0	0	0		ENST00000587974.1_1_18:43487913-43547205:-|nuORF;nc|ENSG00000152223|Q9HCE0-2|EPG5;ENSG00000152223|ENST00000282041|EPG5	ENST00000587974.1_1_18:43487913-43547205:-|nuORF	ENST00000587974.1_1_18:43487913-43547205:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.2735900878906	2	465.276378	928.538203	-0.08443	-3.9283E-05	-4.1218	-0.0019178	-4.2062	-0.001957	465.2742697431077	18.912	0.59952	18.282	17.975	18.575	-0.62961					34	13	3	0	0	0	0.92973	1	466	466		50.025	3.2581	1	417230			22243	5163	15010	15020	25594	25594					0.07107563282511364
KLYQQIKA	8	Unmodified	_KLYQQIKA_					0	0	0		nc|ENSG00000148660|Q13555-5|CAMK2G;nc|ENSG00000148660|Q13555-7|CAMK2G;ENST00000472912.5_1_10:75578585-75620616:-|nuORF;ENSG00000148660|ENST00000423381|CAMK2G;nc|ENSG00000148660|Q13555-6|CAMK2G;nc|ENSG00000148660|Q13555|CAMK2G;nc|ENSG00000148660|Q13555-10|CAMK2G;nc|ENSG00000148660|Q13555-8|CAMK2G;nc|ENSG00000148660|Q13555-2|CAMK2G;nc|ENSG00000148660|Q13555-9|CAMK2G;nc|ENSG00000148660|Q13555-3|CAMK2G;nc|ENSG00000148660|Q13555-11|CAMK2G;nc|ENSG00000148660|Q13555-4|CAMK2G;nc|ENSG00000058404|Q13554-2|CAMK2B;ENST00000523845.5_1_7:44260423-44302632:-|nuORF;ENST00000497584.5_1_7:44259663-44373862:-|nuORF;nc|ENSG00000058404|Q13554-5|CAMK2B;nc|ENSG00000058404|Q13554-8|CAMK2B;nc|ENSG00000058404|Q13554-3|CAMK2B;nc|ENSG00000058404|Q13554-6|CAMK2B;nc|ENSG00000058404|Q13554-4|CAMK2B;nc|ENSG00000058404|Q13554-7|CAMK2B;ENSG00000058404|ENST00000395749|CAMK2B	nc|ENSG00000148660|Q13555-5|CAMK2G	nc|ENSG00000148660|Q13555-5|CAMK2G	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2376708984375	2	496.300384	990.586216	0.18098	8.9818E-05	-0.68859	-0.00034175	-0.50761	-0.00025193	496.29998061729935	31.516	0.59638	31.623	31.377	31.973	0.10707					18	13	2	0	0	0	0.4196	1	2122	2122		30.504	7.4612	1	146870			22244	4975	15011	15021	25595	25595					0.0905463720255284
KLYQQIKA	8	Unmodified	_KLYQQIKA_					0	0	0		nc|ENSG00000148660|Q13555-5|CAMK2G;nc|ENSG00000148660|Q13555-7|CAMK2G;ENST00000472912.5_1_10:75578585-75620616:-|nuORF;ENSG00000148660|ENST00000423381|CAMK2G;nc|ENSG00000148660|Q13555-6|CAMK2G;nc|ENSG00000148660|Q13555|CAMK2G;nc|ENSG00000148660|Q13555-10|CAMK2G;nc|ENSG00000148660|Q13555-8|CAMK2G;nc|ENSG00000148660|Q13555-2|CAMK2G;nc|ENSG00000148660|Q13555-9|CAMK2G;nc|ENSG00000148660|Q13555-3|CAMK2G;nc|ENSG00000148660|Q13555-11|CAMK2G;nc|ENSG00000148660|Q13555-4|CAMK2G;nc|ENSG00000058404|Q13554-2|CAMK2B;ENST00000523845.5_1_7:44260423-44302632:-|nuORF;ENST00000497584.5_1_7:44259663-44373862:-|nuORF;nc|ENSG00000058404|Q13554-5|CAMK2B;nc|ENSG00000058404|Q13554-8|CAMK2B;nc|ENSG00000058404|Q13554-3|CAMK2B;nc|ENSG00000058404|Q13554-6|CAMK2B;nc|ENSG00000058404|Q13554-4|CAMK2B;nc|ENSG00000058404|Q13554-7|CAMK2B;ENSG00000058404|ENST00000395749|CAMK2B	nc|ENSG00000148660|Q13555-5|CAMK2G	nc|ENSG00000148660|Q13555-5|CAMK2G	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	496.300384	990.586216	-1.0644	-0.00052828	1.0305	0.00051142	-0.033963	-1.6856E-05	496.30085908850236	31.532	0.51432	31.611	31.384	31.899	0.079834	-0.0056346	0.00097942	NaN	30.504	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143960			22245	4975	15011	15021							0.0905463720255284
KLYVYKWIM	9	Unmodified	_KLYVYKWIM_					0	0	0			REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	623.341064453125	2	622.34902	1242.68349	-1.2168	-0.00075725	-2.5346	-0.0015774	-3.7514	-0.0023347	622.3472568145428	93.877	2.2766	94.075	92.951	95.227	0.19827					75	54	2	0	0	0	0.20789	1	9600	9600		16.473	3.514	1	208440	+		22246	24697	15012	15022	25596	25596					0.071852830871876
KLYVYKWIM	9	Unmodified	_KLYVYKWIM_					0	0	0			REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	622.34902	1242.68349	-0.27871	-0.00017346	-2.6847	-0.0016708	-2.9634	-0.0018443	622.3472642367169	94.217	1.0545	94.287	93.376	94.431	0.069595	0.19993	0.0018705	NaN	16.473	40	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	204190	+		22247	24697	15012	15022							0.071852830871876
KLYVYKWIM	9	Unmodified	_KLYVYKWIM_					0	0	0			REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	622.34902	1242.68349	2.0011	0.0012454	-6.8068	-0.0042362	-4.8057	-0.0029908	622.3446845987842	94.096	1.1781	94.037	93.05	94.228	-0.059212	-0.049533	-0.0032602	NaN	16.473	49	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	241180	+		22248	24697	15012	15022							0.071852830871876
KLYVYKWIM	9	Unmodified	_KLYVYKWIM_					0	0	0			REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	622.34902	1242.68349	0.7362	0.00045817	-6.179	-0.0038455	-5.4428	-0.0033873	622.344989715054	94.097	1.54	94.143	93.078	94.618	0.045456	0.056338	-0.0024788	NaN	16.473	37	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	285830	+		22249	24697	15012	15022							0.071852830871876
KLYVYKWIM	9	Unmodified	_KLYVYKWIM_					0	0	0			REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	622.34902	1242.68349	1.2979	0.00080777	-4.2604	-0.0026514	-2.9624	-0.0018437	622.3464112282928	93.741	1.202	93.97	92.835	94.037	0.22863	-0.11706	-9.0708E-05	NaN	16.473	36	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	205960	+		22250	24697	15012	15022							0.071852830871876
KLYVYKWIM	9	Unmodified	_KLYVYKWIM_					0	0	0			REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	REV__ENST00000295304.4_1_2:54001687-54001744:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	622.34902	1242.68349	0.8593	0.00053479	-5.6333	-0.0035059	-4.774	-0.0029711	622.3456304197273	93.847	2.108	94.008	92.921	95.029	0.16118	-0.078303	-0.0017996	NaN	16.473	66	50	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	241910	+		22251	24697	15012	15022							0.071852830871876
KLYYKAVV	8	Unmodified	_KLYYKAVV_					0	0	0		L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|19|2|sense	L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|19|2|sense	L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|19|2|sense	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.2996520996094	2	492.299853	982.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.551	1	56.585	56.085	57.085	0.033184								0	0	0	0.30125	1	5106	5106		20.482	0	1				22252	14685	15013	15023	25597	25597					0.09316422833660454
KMAAAVVLA	9	Unmodified	_KMAAAVVLA_					0	0	0		ENST00000474908.5_1_9:35814712-35815141:-|nuORF;ENST00000461169.1_1_9:35813257-35815015:-|nuORF;ENSG00000180772|ENST00000371906|AGTR2	ENST00000474908.5_1_9:35814712-35815141:-|nuORF	ENST00000474908.5_1_9:35814712-35815141:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2663269042969	2	437.264956	872.515359	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.19	1	23.251	22.751	23.751	0.060431								0	0	0	0.31828	1	753	753		24.203	1.1603	1				22253	7345	15014	15024	25598	25598					0.07400220893396181
KMAELGELKH	10	Oxidation (M)	_KM(Oxidation (M))AELGELKH_		KM(1)AELGELKH		KM(64)AELGELKH	0	0	1		ENST00000484423.5_1_1:145576054-145578613:+|nuORF	ENST00000484423.5_1_1:145576054-145578613:+|nuORF	ENST00000484423.5_1_1:145576054-145578613:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.3130493164062	2	586.310623	1170.60669	0.20543	0.00012045	3.2206	0.0018882	3.426	0.0020087	586.3124970689283	16.453	0.32045	15.855	15.74	16.06	-0.59873					15	6	3	0	0	0	0.3985	1	141	141		64.207	11.271	1	638800			22254	12538	15015	15025	25599	25599		193			0.028214398000500296
KMALVWKR	8	Unmodified	_KMALVWKR_					0	0	0			REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3136596679688	2	516.312772	1030.61099	0.30283	0.00015636	2.6023	0.0013436	2.9051	0.0014999	516.3141992250207	30.163	0.60541	30.073	29.749	30.354	-0.089546					32	13	3	0	0	0	0.89962	1	1966	1966		38.806	0.99462	1	447320	+		22255	30043	15016	15026	25600	25600					0.09690993804292702
KMALVWKR	8	Unmodified	_KMALVWKR_					0	0	0			REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	516.312772	1030.61099	-0.61696	-0.00031855	3.4468	0.0017796	2.8299	0.0014611	516.3145513921004	30.005	0.65682	30.034	29.705	30.362	0.028618	-0.019864	0.00027657	NaN	38.806	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	345470	+		22256	30043	15016	15026							0.09690993804292702
KMALVWKR	8	Unmodified	_KMALVWKR_					0	0	0			REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	516.312772	1030.61099	0.30283	0.00015636	2.6023	0.0013436	2.9051	0.0014999	516.3141992250207	30.163	0.60541	30.073	29.749	30.354	-0.089546	0.019864	-0.00059553	NaN	38.806	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	447320	+		22257	30043	15016	15026							0.09690993804292702
KMAPTVLVH	9	Unmodified	_KMAPTVLVH_					0	0	0		nc|ENSG00000183337|Q6W2J9-4|BCOR;nc|ENSG00000183337|Q6W2J9-2|BCOR;ENSG00000183337|ENST00000378444|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF	nc|ENSG00000183337|Q6W2J9-4|BCOR	nc|ENSG00000183337|Q6W2J9-4|BCOR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.75299072265625	2	498.288963	994.563372	1.4056	0.0007004	-1.0378	-0.00051712	0.36782	0.00018328	498.288177695041	36.068	0.84351	36.509	36.149	36.992	0.44043					44	20	3	0	0	0	0.20433	1	2818	2818		90.777	40.752	1	839900			22258	15142	15017	15027	25601	25601					0.06587294813425615
KMAPVLQTG	9	Unmodified	_KMAPVLQTG_					0	0	0			REV__ENST00000298307.9_1_14:50247450-50249128:+|nuORF	REV__ENST00000298307.9_1_14:50247450-50249128:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7672119140625	2	472.76532	943.516088	0.74188	0.00035074	3.3813	0.0015986	4.1232	0.0019493	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.78536	1	8515	8515		29.15	0.89528	1	547170	+		22259	24731	15018	15028	25602	25602					0.04207015542442605
KMDARRLPL	9	Unmodified	_KMDARRLPL_					0	0	0			REV__ENST00000272402.2_1_2:96932001-96933385:+|nuORF	REV__ENST00000272402.2_1_2:96932001-96933385:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3221435546875	2	550.323868	1098.63318	-0.71912	-0.00039575	-3.86	-0.0021242	-4.5791	-0.00252	550.3215471548743	59.953	0.5795	60.507	60.239	60.818	0.55323					34	15	3	0	0	0	0.36616	1	6381	6381		60.118	1.872	1	695510	+		22260	24544	15019	15029	25603	25603					0.08781173482066151
KMERERSQII	10	Unmodified	_KMERERSQII_					0	0	0			REV__ENSG00000072501|ENST00000322213|SMC1A	REV__ENSG00000072501|ENST00000322213|SMC1A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	645.8840942382812	2	645.353354	1288.69215	2.6512	0.001711	2.9986	0.0019352	5.6498	0.0036461	645.3549367038554	105.88	1.0786	105.84	105.28	106.36	-0.03714					45	25	2	0	0	0	0.37624	1	11699	11699		34.173	0	1	196270	+		22261	16648	15020	15030	25604	25604					0.05935604985734244
KMERYDLVK	9	Unmodified	_KMERYDLVK_					0	0	0			REV__chr14:49795944-49797373|22|62.59|0.91|6.11|-|1|NEMF,NEMF|1	REV__chr14:49795944-49797373|22|62.59|0.91|6.11|-|1|NEMF,NEMF|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	591.3174438476562	2	591.320991	1180.62743	0.11826	6.9931E-05	-1.9672	-0.0011633	-1.8489	-0.0010933	591.3195203707345	66.847	0.7553	66.811	66.494	67.25	-0.035698					74	33	3	0	0	0	0.71772	1	6425	6425		39.253	1.4413	1	235530	+		22262	15597	15021	15031	25605	25605					0.04434030179709225
KMERYDLVK	9	Unmodified	_KMERYDLVK_					0	0	0			REV__chr14:49795944-49797373|22|62.59|0.91|6.11|-|1|NEMF,NEMF|1	REV__chr14:49795944-49797373|22|62.59|0.91|6.11|-|1|NEMF,NEMF|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	591.3218383789062	2	591.320991	1180.62743	0.58504	0.00034595	-2.3662	-0.0013992	-1.7812	-0.0010532	591.3198270351554	66.674	0.81735	66.801	66.48	67.297	0.1265					65	36	2	0	0	0	0.64555	1	5923	5923		44.377	2.9506	1	190160	+		22263	15597	15021	15031	25606	25606					0.04434030179709225
KMFFETNENKD	11	Unmodified	_KMFFETNENKD_					0	0	0		L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|156|3|sense;L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|147|3|sense;L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|103|2|sense;L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|53|2|sense;nc|ENSG999|O00370|L1_ORF2	L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|156|3|sense	L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|156|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.21527099609375	3	468.215098	1401.62347	2.0731	0.00097064	0.68956	0.00032286	2.7626	0.0012935	468.21521470133666	25.366	0.60439	24.935	24.627	25.231	-0.4311					31	13	3	0	0	0	0.75779	1	1318	1318		20.315	0.68808	1	190190			22264	14649	15022	15032	25607	25607					-0.06128104104641352
KMFVTVETK	9	Oxidation (M)	_KM(Oxidation (M))FVTVETK_		KM(1)FVTVETK		KM(64)FVTVETK	0	0	1			REV__ENST00000489813.1_1_3:38537858-38539466:+|nuORF	REV__ENST00000489813.1_1_3:38537858-38539466:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.7974853515625	2	549.796817	1097.57908	-0.88246	-0.00048517	3.9284	0.0021598	3.046	0.0016747	549.7990066195847	32.311	0.73221	32.438	32.116	32.848	0.12643					29	16	3	0	0	0	0.3164	1	2254	2254		63.534	15.877	1	303790	+		22265	27626	15023	15033	25608	25608		414			0.03419536539809087
KMGFFRRRYKE	11	Unmodified	_KMGFFRRRYKE_					0	0	0		ENSG00000144668|ENST00000264741|ITGA9	ENSG00000144668|ENST00000264741|ITGA9	ENSG00000144668|ENST00000264741|ITGA9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3160705566406	3	506.610117	1516.80852	0.43496	0.00022035	-3.3092	-0.0016765	-2.8742	-0.0014561	506.60847494695213	59.231	0.41777	59.345	59.183	59.601	0.11396					15	10	2	0	0	0	0.18028	1	5059	5059		0.3405	0	1	46590			22266	4725	15024	15034	25609	25609					0.07078968276300657
KMGSYYIN	8	Oxidation (M)	_KM(Oxidation (M))GSYYIN_		KM(1)GSYYIN		KM(61)GSYYIN	0	0	1		ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF	ENSG00000009830|ENST00000261534|POMT2	ENSG00000009830|ENST00000261534|POMT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2319030761719	2	496.23131	990.448068	0.16177	8.0276E-05	1.7733	0.00087994	1.935	0.00096022	496.23226644846267	55.728	0.46914	56.287	55.983	56.452	0.55953					27	11	3	0	0	0	0.83456	1	5752	5752		60.972	9.6365	1	652630			22267	757	15025	15035	25610	25610		9			-0.04753854108230371
KMHFSIAKKI	10	Unmodified	_KMHFSIAKKI_					0	0	0			REV__ENSG00000070601|ENST00000377765|FRMPD1	REV__ENSG00000070601|ENST00000377765|FRMPD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.8578491210938	2	601.857544	1201.70053	-0.51505	-0.00030999	0.70741	0.00042576	0.19236	0.00011577	601.8578575542072	103.62	2.2032	103.62	103.26	105.47	-0.0035706					116	52	4	0	0	0	0.77314	1	11178	11178		40.778	6.8565	1	1418100	+		22268	16605	15026	15036	25611	25611					0.10775203693015101
KMHQALRTL	9	Unmodified	_KMHQALRTL_					0	0	0			REV__ENSG00000237441|ENST00000497454|RGL2	REV__ENSG00000237441|ENST00000497454|RGL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3197021484375	2	549.316043	1096.61753	0.85079	0.00046735	2.0297	0.0011149	2.8804	0.0015823	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.7932	1	10675	10675		21.96	1.013	1	2023500	+		22269	23797	15027	15037	25612	25612					0.0730888696502916
KMIIKEYRIP	10	Unmodified	_KMIIKEYRIP_					0	0	0		ENST00000451868.2_1_12:123484929-123519149:-|nuORF;ENST00000535289.1_1_12:123518987-123519149:-|nuORF	ENST00000451868.2_1_12:123484929-123519149:-|nuORF	ENST00000451868.2_1_12:123484929-123519149:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	645.8847045898438	2	645.883758	1289.75296	2.6478	0.0017102	-2.865	-0.0018505	-0.21718	-0.00014027	645.8818448298974	105.88	1.6011	105.84	105.23	106.83	-0.03714					97	37	3	0	0	0	0.8651	1	11712	11712		25.574	1.0549	1	1766900			22270	11906	15028	15038	25613	25613					0.11967742035972151
KMISLLRHQK	10	Unmodified	_KMISLLRHQK_					0	0	0		ENST00000257749.8_2_6:90638105-90638159:-|nuORF	ENST00000257749.8_2_6:90638105-90638159:-|nuORF	ENST00000257749.8_2_6:90638105-90638159:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3816528320312	2	627.379175	1252.7438	2.8977	0.001818	2.61	0.0016375	5.5077	0.0034554	627.3807793475283	117.42	2.8472	117.4	117.12	119.97	-0.02433					162	110	2	0	0	0	0.37624	1	13115	13115		24.519	5.4157	1	271640			22271	9359	15029	15039	25614	25614					0.12753393470279661
KMISLLRHQK	10	Unmodified	_KMISLLRHQK_					0	0	0		ENST00000257749.8_2_6:90638105-90638159:-|nuORF	ENST00000257749.8_2_6:90638105-90638159:-|nuORF	ENST00000257749.8_2_6:90638105-90638159:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.8853759765625	2	627.379175	1252.7438	0.9795	0.00061452	3.7075	0.002326	4.687	0.0029405	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.86587	1	13126	13126		29.17	3.1067	1	19815000			22272	9359	15029	15039	25615	25615					0.12753393470279661
KMKFFLKM	8	Unmodified	_KMKFFLKM_					0	0	0			REV__ENSG00000078814|ENST00000262873|MYH7B	REV__ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.80224609375	2	536.805934	1071.59731	-1.3069	-0.00070154	-3.8781	-0.0020818	-5.185	-0.0027833	536.8036014222257	44.843	0.45214	45.688	45.461	45.913	0.84438					19	10	2	0	0	0	0.90465	1	4169	4169		40.573	3.0644	1	368810	+		22273	16773	15030	15040	25616	25616					0.06437999980857967
KMKFFLKM	8	Unmodified	_KMKFFLKM_					0	0	0			REV__ENSG00000078814|ENST00000262873|MYH7B	REV__ENSG00000078814|ENST00000262873|MYH7B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	536.805934	1071.59731	-0.74709	-0.00040104	-4.5727	-0.0024547	-5.3198	-0.0028557	536.8033883205524	45.071	0.41277	45.534	45.304	45.717	0.46313	-0.076679	-0.00042493	NaN	40.573	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	559540	+		22274	16773	15030	15040							0.06437999980857967
KMKNLPVP	8	Unmodified	_KMKNLPVP_					0	0	0		nc|ENSG00000008294|O60271-9|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-2|SPAG9;ENSG00000008294|ENST00000262013|SPAG9;ENST00000514613.5_1_17:49067015-49156972:-|nuORF;nc|ENSG00000008294|O60271-5|SPAG9;nc|ENSG00000008294|O60271-3|SPAG9	nc|ENSG00000008294|O60271-9|SPAG9	nc|ENSG00000008294|O60271-9|SPAG9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.77972412109375	2	463.778231	925.541908	-0.0076853	-3.5643E-06	1.8606	0.00086291	1.8529	0.00085935	463.7789487547492	39.5	0.41193	39.447	39.191	39.603	-0.052731					16	10	2	0	0	0	0.9159	1	2422	2422		44.531	16.277	1	217060			22275	740	15031	15041	25617	25617					0.07615909784726682
KMKNLPVP	8	Unmodified	_KMKNLPVP_					0	0	0		nc|ENSG00000008294|O60271-9|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-2|SPAG9;ENSG00000008294|ENST00000262013|SPAG9;ENST00000514613.5_1_17:49067015-49156972:-|nuORF;nc|ENSG00000008294|O60271-5|SPAG9;nc|ENSG00000008294|O60271-3|SPAG9	nc|ENSG00000008294|O60271-9|SPAG9	nc|ENSG00000008294|O60271-9|SPAG9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7789001464844	2	463.778231	925.541908	-2.226	-0.0010324	2.4022	0.0011141	0.17618	8.1707E-05	463.77924988782166	40.526	1.7931	40.918	39.408	41.202	0.39209					79	45	2	0	0	0	0.89457	1	3364	3364		37.028	2.8559	1	9649600			22276	740	15031	15041	25618	25618					0.07615909784726682
KMKPGKLHL	9	Unmodified	_KMKPGKLHL_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3245849609375	2	526.325879	1050.63721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.284	1	60.317	59.817	60.817	0.032822								0	0	0	0.32159	1	5605	5605		23.042	1.3402	1		+		22277	18623	15032	15042	25619	25619					0.11391262975780592
KMKPPVLS	8	Unmodified	_KMKPPVLS_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2740173339844	2	450.272781	898.531009	1.7291	0.00077856	1.6772	0.00075519	3.4063	0.0015338	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.87479	1	10142	10142		30.504	3.7075	1	51820000			22278	2924	15033	15043	25620	25620					0.07768507410446546
KMKPWPSVTQ	10	Unmodified	_KMKPWPSVTQ_					0	0	0		ENST00000369660.8_1_X:153713031-153713436:-|nuORF	ENST00000369660.8_1_X:153713031-153713436:-|nuORF	ENST00000369660.8_1_X:153713031-153713436:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.8580322265625	2	601.323534	1200.63251	3.2474	0.0019528	-0.72658	-0.00043691	2.5209	0.0015159	601.3234370452171	103.48	0.27647	103.43	103.29	103.56	-0.043755					8	6	2	0	0	0	0.37624	1	11345	11345		31.53	6.4038	1	137640			22279	10624	15034	15044	25621	25621					0.04022334042360853
KMLLDHLKLVA	11	Unmodified	_KMLLDHLKLVA_					0	0	0		ENSG00000097096|ENST00000341460|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3591918945312	2	640.891583	1279.76861	0.93415	0.00059869	-3.1366	-0.0020102	-2.2024	-0.0014115	641.3914108983167	100.16	0.3097	100.31	100.07	100.38	0.15073					10	6	2	0	0	0	0.17625	1	10429	10429		22.58	0	1	39432			22280	1746	15035	15045	25622	25622					0.13992028553002456
KMLLSQVF	8	Unmodified	_KMLLSQVF_					0	0	0			REV__ENSG00000117501|ENST00000367759|MROH9	REV__ENSG00000117501|ENST00000367759|MROH9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.2784729003906	2	483.278063	964.541574	2.0431	0.00098738	-0.56456	-0.00027284	1.4785	0.00071454	483.27782445100183	95.324	2.0754	95.266	94.681	96.756	-0.057526					132	48	4	0	0	0	0.86288	1	10256	10256		26.796	0	1	1278800	+		22281	18265	15036	15046	25623	25623					0.05788490064878715
KMLPKFAS	8	Unmodified	_KMLPKFAS_					0	0	0			REV__ENSG00000158553|ENST00000444565|POM121L2	REV__ENSG00000158553|ENST00000444565|POM121L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.2647399902344	2	461.264956	920.515359	-0.62689	-0.00028916	1.5264	0.00070405	0.89946	0.00041489	461.2655554991364	92.786	1.0453	93.236	92.861	93.907	0.44988					61	24	3	0	0	0	0.80706	1	11082	11082		19.36	0	1	389140	+		22282	20612	15037	15047	25624	25624					0.051922208933888214
KMLRTTTK	8	Oxidation (M)	_KM(Oxidation (M))LRTTTK_		KM(1)LRTTTK		KM(100)LRTTTK	0	0	1			REV__ENST00000485167.1_1_1:109318992-109319040:+|nuORF	REV__ENST00000485167.1_1_1:109318992-109319040:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7872009277344	2	497.789327	993.5641	-0.7782	-0.00038738	-3.1053	-0.0015458	-3.8835	-0.0019332	497.7877730661561	26.959	1.6901	26.784	26.205	27.895	-0.17559					78	37	4	0	0	0	0.35525	1	1510	1510		101.6	11.231	1	5085600	+		22283	27521	15038	15048	25625	25625		412			0.06706089462488762
KMLVEEEGL	9	Unmodified	_KMLVEEEGL_					0	0	0		nc|ENSG00000203995|Q6WRX3-2|ZYG11A;ENSG00000203995|ENST00000371528|ZYG11A	nc|ENSG00000203995|Q6WRX3-2|ZYG11A	nc|ENSG00000203995|Q6WRX3-2|ZYG11A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2705078125	2	524.273175	1046.5318	0.068728	3.6032E-05	-3.8279	-0.0020069	-3.7592	-0.0019708	524.2709698918767	75.989	0.87818	76.558	76.184	77.062	0.56836					57	21	4	0	0	0	0.28163	1	8680	8680		66.429	2.222	1	1616600			22284	8405	15039	15049	25626	25626					0.01039257268826077
KMLYRVKVN	9	Unmodified	_KMLYRVKVN_					0	0	0			REV__ENST00000487196.1_1_10:5800911-5803598:+|nuORF	REV__ENST00000487196.1_1_10:5800911-5803598:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8427124023438	2	575.841894	1149.66923	-0.99735	-0.00057431	2.7404	0.001578	1.743	0.0010037	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.78058	1	9658	9658		30.504	5.0535	1	5638300	+		22285	27571	15040	15050	25627	25627					0.10038630658937109
KMLYRVKVN	9	Unmodified	_KMLYRVKVN_					0	0	0			REV__ENST00000487196.1_1_10:5800911-5803598:+|nuORF	REV__ENST00000487196.1_1_10:5800911-5803598:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8428344726562	2	575.841894	1149.66923	0.91496	0.00052687	0.96246	0.00055422	1.8774	0.0010811	575.8423131361362	90.432	2.8004	90.479	88.667	91.467	0.046448					215	66	4	0	0	0	0.7932	1	9308	9308		21.96	1.013	1	2025300	+		22286	27571	15040	15050	25628	25628					0.10038630658937109
KMLYRVKVN	9	Unmodified	_KMLYRVKVN_					0	0	0			REV__ENST00000487196.1_1_10:5800911-5803598:+|nuORF	REV__ENST00000487196.1_1_10:5800911-5803598:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8429565429688	2	575.841894	1149.66923	0.91732	0.00052823	0.78637	0.00045282	1.7037	0.00098106	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.74721	1	9714	9714		37.159	5.2042	1	5468500	+		22287	27571	15040	15050	25629	25629					0.10038630658937109
KMLYRVKVN	9	Unmodified	_KMLYRVKVN_					0	0	0			REV__ENST00000487196.1_1_10:5800911-5803598:+|nuORF	REV__ENST00000487196.1_1_10:5800911-5803598:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8427734375	2	575.841894	1149.66923	0.80402	0.00046299	0.89767	0.00051691	1.7017	0.0009799	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.7932	1	9385	9385		21.96	1.013	1	6947200	+		22288	27571	15040	15050	25630	25630					0.10038630658937109
KMMRKKKKRME	11	Unmodified	_KMMRKKKKRME_					0	0	0			REV__chr12:6769674-6770157|28|406.54|0.8|8.98|+|0|PTMS,PTMS|1	REV__chr12:6769674-6770157|28|406.54|0.8|8.98|+|0|PTMS,PTMS|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.62371826171875	3	498.624493	1492.85165	-1.9133	-0.00095401	-1.0814	-0.00053921	-2.9947	-0.0014932	498.62386245575794	21.686	1.0367	21.686	21.107	22.144	0					71	45	2	0	0	0	0.77803	1	591	591		15.921	1.8346	1	49754	+		22289	15554	15041	15051	25631	25631					0.12493698737694103
KMNKPLVP	8	Unmodified	_KMNKPLVP_					0	0	0			REV__chr2:27640125-27642429|17|10.35|0.35|4.9|+|2|GPN1,GPN1|1	REV__chr2:27640125-27642429|17|10.35|0.35|4.9|+|2|GPN1,GPN1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.77880859375	2	463.778231	925.541908	0.21343	9.8984E-05	1.887	0.00087515	2.1004	0.00097413	463.7789090277637	39.35	0.42563	39.438	39.145	39.57	0.088371					22	11	3	0	0	0	0.89457	1	2407	2407		37.028	0	1	186570	+		22290	15756	15042	15052	25632	25632					0.07615909784726682
KMNKPLVP	8	Unmodified	_KMNKPLVP_					0	0	0			REV__chr2:27640125-27642429|17|10.35|0.35|4.9|+|2|GPN1,GPN1|1	REV__chr2:27640125-27642429|17|10.35|0.35|4.9|+|2|GPN1,GPN1|1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	463.778231	925.541908	0.21343	9.8984E-05	1.887	0.00087515	2.1004	0.00097413	463.7789090277637	39.35	0.42563	39.438	39.145	39.57	0.088371	-0.025658	-0.00044055	NaN	37.028	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186570	+		22291	15756	15042	15052							0.07615909784726682
KMPKATGF	8	Unmodified	_KMPKATGF_					0	0	0		ENST00000321250.12_1_8:29964894-29965068:+|nuORF	ENST00000321250.12_1_8:29964894-29965068:+|nuORF	ENST00000321250.12_1_8:29964894-29965068:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	439.2521667480469	2	440.241481	878.468409	-1.1371	-0.00050058	-1.3328	-0.00058675	-2.4698	-0.0010873	440.2407987875836	91.085	0.81664	91.085	90.649	91.465	0					31	19	2	0	0	0	0.4196	1	8925	8925		25.45	17.76	1	174200			22292	10036	15043	15053	25633	25633					0.02431361342269156
KMPKATGF	8	Unmodified	_KMPKATGF_					0	0	0		ENST00000321250.12_1_8:29964894-29965068:+|nuORF	ENST00000321250.12_1_8:29964894-29965068:+|nuORF	ENST00000321250.12_1_8:29964894-29965068:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	440.241481	878.468409	-1.4451	-0.00063621	-1.224	-0.00053886	-2.6691	-0.0011751	440.24086026043267	90.562	0.71131	90.779	90.426	91.138	0.21736	-0.17995	0.00084148	NaN	18.324	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	193460			22293	10036	15043	15053							0.02431361342269156
KMPKATGF	8	Unmodified	_KMPKATGF_					0	0	0		ENST00000321250.12_1_8:29964894-29965068:+|nuORF	ENST00000321250.12_1_8:29964894-29965068:+|nuORF	ENST00000321250.12_1_8:29964894-29965068:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	440.241481	878.468409	0.65039	0.00028633	-3.0531	-0.0013441	-2.4027	-0.0010578	440.2400234798475	90.929	0.71663	91.083	90.471	91.188	0.15388	0.12409	-0.00076901	NaN	18.324	30	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	244450			22294	10036	15043	15053							0.02431361342269156
KMPKATGF	8	Unmodified	_KMPKATGF_					0	0	0		ENST00000321250.12_1_8:29964894-29965068:+|nuORF	ENST00000321250.12_1_8:29964894-29965068:+|nuORF	ENST00000321250.12_1_8:29964894-29965068:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	440.241481	878.468409	-1.8066	-0.00079533	-0.71826	-0.00031621	-2.5248	-0.0011115	440.241014204719	90.663	0.84489	90.843	90.474	91.319	0.18029	-0.11559	0.0012868	NaN	18.324	33	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144860			22295	10036	15043	15053							0.02431361342269156
KMPKTKQLQQ	10	Unmodified	_KMPKTKQLQQ_					0	0	0		L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|14|1|sense	L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|14|1|sense	L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|14|1|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	615.3612060546875	2	615.355365	1228.69618	-0.11045	-6.7968E-05	3.5725	0.0021984	3.4621	0.0021304	615.3576279299549	104.87	2.2143	104.87	104.31	106.53	0					144	52	4	0	0	0	0.86587	1	10778	10778		29.17	4.0441	1	1478900			22296	14610	15044	15054	25634	25634					0.09097694479441998
KMQTGNRDYK	10	Unmodified	_KMQTGNRDYK_					0	0	0			REV__ENST00000544138.5_1_11:63714317-63721948:+|nuORF	REV__ENST00000544138.5_1_11:63714317-63721948:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	620.8087768554688	2	620.808779	1239.60301	-0.56995	-0.00035383	-0.15115	-9.3834E-05	-0.7211	-0.00044766	620.8089892457849	59.564	1.2818	59.955	59.441	60.723	0.39077					85	32	5	0	0	0	0.86106	1	6248	6248		33.922	1.1092	1	3018100	+		22297	28510	15045	15055	25635	25635					-0.007212299738057482
KMREVHGP	8	Unmodified	_KMREVHGP_					0	0	0			REV__ENST00000554610.1_2_14:65879917-66028150:+|nuORF	REV__ENST00000554610.1_2_14:65879917-66028150:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	477.250244140625	2	477.252911	952.49127	-0.24396	-0.00011643	-3.3038	-0.0015767	-3.5477	-0.0016932	477.25122861429037	30.163	0.53972	30.12	29.92	30.46	-0.043095					17	12	2	0	0	0	0.87922	1	1629	1629		31.955	3.7006	1	36288	+		22298	28667	15046	15056	25636	25636					0.013123804597398703
KMREVHGP	8	Unmodified	_KMREVHGP_					0	0	0			REV__ENST00000554610.1_2_14:65879917-66028150:+|nuORF	REV__ENST00000554610.1_2_14:65879917-66028150:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	477.252911	952.49127	-0.24396	-0.00011643	-3.3038	-0.0015767	-3.5477	-0.0016932	477.25122861429037	30.163	0.53972	30.12	29.92	30.46	-0.043095	-0.029434	-0.00024901	NaN	31.955	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36288	+		22299	28667	15046	15056							0.013123804597398703
KMRQILDKQQK	11	Unmodified	_KMRQILDKQQK_					0	0	0		nc|ENSG00000120899|Q14289-2|PTK2B;ENSG00000120899|ENST00000346049|PTK2B;ENST00000397497.8_2_8:27288866-27309154:+|nuORF	nc|ENSG00000120899|Q14289-2|PTK2B	nc|ENSG00000120899|Q14289-2|PTK2B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.61065673828125	3	472.609894	1414.80785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.06	1	117.99	117.49	118.49	-0.07531								0	0	0	0.56276	1	12672	12672		17.833	5.9008	1				22300	3157	15047	15057	25637	25637					0.11704128836572636
KMRRMKFRRRR	11	Unmodified	_KMRRMKFRRRR_					0	0	0			REV__ENSG00000023171|ENST00000635736|GRAMD1B	REV__ENSG00000023171|ENST00000635736|GRAMD1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2588195800781	4	405.996411	1619.95654	-1.8707	-0.00075949	0.62658	0.00025439	-1.2441	-0.0005051	405.99692831076396	57.263	0.20012	57.343	57.198	57.398	0.079643					12	9	2	0	0	0	0.18421	1	4834	4834		0.3405	0	1	78167	+		22301	16246	15048	15058	25638	25638					0.17136001049129845
KMRRMKFRRRR	11	Unmodified	_KMRRMKFRRRR_					0	0	0			REV__ENSG00000023171|ENST00000635736|GRAMD1B	REV__ENSG00000023171|ENST00000635736|GRAMD1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.75689697265625	4	405.996411	1619.95654	-1.8717	-0.00075992	3.5279	0.0014323	1.6562	0.0006724	405.99771940866157	56.732	0.68038	56.804	56.56	57.241	0.071831					40	31	2	0	0	0	0.18318	1	4803	4803		6.001	4.5823	1	402410	+		22302	16246	15048	15058	25639	25639					0.17136001049129845
KMRRMKFRRRR	11	Unmodified	_KMRRMKFRRRR_					0	0	0			REV__ENSG00000023171|ENST00000635736|GRAMD1B	REV__ENSG00000023171|ENST00000635736|GRAMD1B	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		4	405.996411	1619.95654	-1.6303	-0.0006619	1.9769	0.0008026	0.34655	0.0001407	406.2479375709399	57.115	0.67939	57.115	56.823	57.503	0	0.36493	0.0006537	NaN	6.001	38	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59036	+		22303	16246	15048	15058							0.17136001049129845
KMRRMKFRRRR	11	Unmodified	_KMRRMKFRRRR_					0	0	0			REV__ENSG00000023171|ENST00000635736|GRAMD1B	REV__ENSG00000023171|ENST00000635736|GRAMD1B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		4	405.996411	1619.95654	0.33636	0.00013656	1.1431	0.00046411	1.4795	0.00060067	406.2476338887775	56.489	0.65946	56.588	56.506	57.165	0.099186	-0.16193	-0.00070026	NaN	6.001	46	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	497390	+		22304	16246	15048	15058							0.17136001049129845
KMRRMRRRRRW	11	Unmodified	_KMRRMRRRRRW_					0	0	0		ENST00000281708.8_1_4:153271275-153332654:-|nuORF	ENST00000281708.8_1_4:153271275-153332654:-|nuORF	ENST00000281708.8_1_4:153271275-153332654:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.8995971679688	3	563.331805	1686.97359	0.22911	0.00012906	1.828	0.0010298	2.0571	0.0011588	563.6676719298633	30.3	0.18599	30.412	30.309	30.495	0.11225					13	8	2	0	0	0	0.18421	1	1344	1344		1.4188	0	1	79998			22305	9628	15049	15059	25640	25640					0.15757921654926577
KMRRMRRRRRW	11	Unmodified	_KMRRMRRRRRW_					0	0	0		ENST00000281708.8_1_4:153271275-153332654:-|nuORF	ENST00000281708.8_1_4:153271275-153332654:-|nuORF	ENST00000281708.8_1_4:153271275-153332654:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	563.331805	1686.97359	0.63869	0.00035979	2.1303	0.0012001	2.769	0.0015599	563.332323166069	30.405	0.17752	30.403	30.346	30.524	-0.0022526	-0.0047327	0.00025384	NaN	1.4188	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51792			22306	9628	15049	15059							0.15757921654926577
KMRRNQFWVKV	11	Unmodified	_KMRRNQFWVKV_					0	0	0			REV__ENSG00000173917|ENST00000330070|HOXB2	REV__ENSG00000173917|ENST00000330070|HOXB2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.28558349609375	3	497.950362	1490.82926	-1.8811	-0.00093669	3.4618	0.0017238	1.5807	0.00078712	497.95200362159926	24.056	0.79183	24.056	23.674	24.466	0					97	33	4	0	0	0	0.78683	1	821	821		14.086	3.4992	1	192870	+		22307	21963	15050	15060	25641	25641					0.10347558655939793
KMSILLKSA	9	Unmodified	_KMSILLKSA_					0	0	0		ENST00000471115.5_1_1:85718343-85724278:-|nuORF	ENST00000471115.5_1_1:85718343-85724278:-|nuORF	ENST00000471115.5_1_1:85718343-85724278:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	495.80474853515625	2	495.804445	989.594338	1.5878	0.00078725	2.1548	0.0010684	3.7426	0.0018556	495.8054984304761	91.127	1.9829	91.06	90.603	92.586	-0.067085					94	47	4	0	0	0	0.78058	1	9607	9607		30.504	5.0535	1	755260			22308	12234	15051	15061	25642	25642					0.09912448127693096
KMTLCKPNLI	10	Unmodified	_KMTLCKPNLI_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8286743164062	2	580.830137	1159.64572	-1.9881	-0.0011547	2.5512	0.0014818	0.56313	0.00032708	580.8312794976786	59.527	0.91995	59.918	59.525	60.445	0.39077					48	22	3	0	0	0	0.33399	1	6312	6312		69.628	2.6657	1	1069200	+		22309	22085	15052	15062	25643	25643					0.07228448830096568
KMVATASYE	9	Unmodified	_KMVATASYE_					0	0	0		nc|ENSG00000100968|Q14934-5|NFATC4;nc|ENSG00000100968|Q14934-13|NFATC4;nc|ENSG00000100968|Q14934-3|NFATC4;nc|ENSG00000100968|Q14934-20|NFATC4;nc|ENSG00000100968|Q14934-4|NFATC4;nc|ENSG00000100968|Q14934-7|NFATC4;nc|ENSG00000100968|Q14934-8|NFATC4;nc|ENSG00000100968|Q14934-14|NFATC4;nc|ENSG00000100968|Q14934-10|NFATC4;nc|ENSG00000100968|Q14934-11|NFATC4;nc|ENSG00000100968|Q14934-6|NFATC4;ENSG00000100968|ENST00000250373|NFATC4;nc|ENSG00000100968|Q14934-9|NFATC4;nc|ENSG00000100968|Q14934-12|NFATC4;nc|ENSG00000100968|Q14934-21|NFATC4;nc|ENSG00000100968|Q14934-15|NFATC4;nc|ENSG00000100968|Q14934-16|NFATC4;nc|ENSG00000100968|Q14934-17|NFATC4;nc|ENSG00000100968|Q14934-18|NFATC4;ENST00000556957.5_1_14:24836547-24843333:+|nuORF;ENST00000556302.5_1_14:24838518-24843333:+|nuORF;nc|ENSG00000100968|Q14934-19|NFATC4;ENST00000557028.5_1_14:24837525-24843333:+|nuORF;nc|ENSG00000100968|Q14934-2|NFATC4	nc|ENSG00000100968|Q14934-5|NFATC4	nc|ENSG00000100968|Q14934-5|NFATC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.24603271484375	2	500.244418	998.474282	0.40098	0.00020059	3.0998	0.0015506	3.5008	0.0017512	500.24573835289385	28.587	0.57655	28.623	28.367	28.944	0.03607					28	19	2	0	0	0	0.78536	1	1383	1383		29.15	1.2673	1	39891			22310	14819	15053	15063	25644	25644					-0.025015849367377996
KMVFRIQEF	9	Unmodified	_KMVFRIQEF_					0	0	0			REV__nc|ENSG00000057252|P35610-3|SOAT1	REV__nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.321533203125	2	599.326076	1196.6376	-2.134	-0.001279	-4.0646	-0.002436	-6.1986	-0.003715	599.3235220965041	59.467	0.82425	59.5	59.09	59.914	0.032822					43	19	3	0	0	0	0.44421	1	5497	5497		54.776	3.4409	1	288620	+		22311	16425	15054	15064	25645	25645					0.04714637904976371
KMVKSLKKAM	10	Unmodified	_KMVKSLKKAM_					0	0	0		nc|ENSG00000158816|Q5TIE3-5|VWA5B1;ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1;nc|ENSG00000158816|Q5TIE3-4|VWA5B1;nc|ENSG00000158816|Q5TIE3-3|VWA5B1	nc|ENSG00000158816|Q5TIE3-5|VWA5B1	nc|ENSG00000158816|Q5TIE3-5|VWA5B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3516235351562	2	582.353779	1162.69301	2.7406	0.001596	-2.7497	-0.0016013	-0.0091172	-5.3095E-06	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.8608	1	12868	12868		34.173	1.3601	1	7862700			22312	5498	15055	15065	25646	25646					0.11816728101075569
KMVSFLTLA	9	Unmodified	_KMVSFLTLA_					0	0	0			REV__chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|9	REV__chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.2918701171875	2	505.291171	1008.56779	-0.42526	-0.00021488	0.99407	0.00050229	0.56881	0.00028742	505.29158900828264	97.072	2.1897	97.303	96.825	99.015	0.23103					138	50	4	0	0	0	0.7932	1	9998	9998		23.042	1.0826	1	1851600	+		22313	15845	15056	15066	25647	25647					0.06384759236345872
KMWTIKTR	8	Unmodified	_KMWTIKTR_					0	0	0			REV__nc|ENSG00000148700|Q9UEY8-2|ADD3	REV__nc|ENSG00000148700|Q9UEY8-2|ADD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.305419921875	2	532.307687	1062.60082	0.72021	0.00038338	-4.0804	-0.002172	-3.3602	-0.0017886	532.3053999342459	32.665	0.67791	32.877	32.593	33.271	0.21168					35	15	3	0	0	0	0.60357	1	2331	2331		71.296	4.8664	1	927210	+		22314	20132	15057	15067	25648	25648					0.07202386079052303
KMWTIKTR	8	Unmodified	_KMWTIKTR_					0	0	0			REV__nc|ENSG00000148700|Q9UEY8-2|ADD3	REV__nc|ENSG00000148700|Q9UEY8-2|ADD3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	532.307687	1062.60082	0.72021	0.00038338	-4.0804	-0.002172	-3.3602	-0.0017886	532.3053999342459	32.665	0.67791	32.877	32.593	33.271	0.21168	0.016112	-8.1946E-05	NaN	71.296	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	927210	+		22315	20132	15057	15067							0.07202386079052303
KMYLSPKKTL	10	Unmodified	_KMYLSPKKTL_					0	0	0			REV__ENST00000370766.7_1_X:134425468-134426389:-|nuORF	REV__ENST00000370766.7_1_X:134425468-134426389:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.5753173828125	3	403.573898	1207.69987	2.802	0.0011308	-0.45642	-0.0001842	2.3455	0.0009466	403.5736497882377	83.618	2.5639	83.677	83.026	85.59	0.059258					112	58	3	0	0	0	0.86776	1	8349	8349		26.75	2.5179	1	261970	+		22316	25664	15058	15068	25649	25649					0.10432364253301785
KNAKLRTWTLI	11	Unmodified	_KNAKLRTWTLI_					0	0	0		ENST00000273258.3_1_3:69134136-69134307:+|nuORF	ENST00000273258.3_1_3:69134136-69134307:+|nuORF	ENST00000273258.3_1_3:69134136-69134307:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	449.2330017089844	3	448.610111	1342.8085	-1.2633	-0.00056673	-0.29128	-0.00013067	-1.5546	-0.0006974	448.6098135083333	82.528	1.0923	82.528	81.965	83.057	0					63	26	3	0	0	0	0.17955	1	7730	7730		8.7993	0.39205	1	108390			22317	9575	15059	15069	25650	25650					0.15081291547926412
KNALLDLAM	9	Unmodified	_KNALLDLAM_					0	0	0			REV__ENST00000527315.5_1_15:69323805-69349033:+|nuORF	REV__ENST00000527315.5_1_15:69323805-69349033:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.77972412109375	2	494.778428	987.542302	-0.60525	-0.00029947	4.2344	0.0020951	3.6291	0.0017956	494.7803656183054	83.829	2.2213	83.994	82.644	84.865	0.1651					103	51	3	0	0	0	0.76255	1	8138	8138		35.618	3.6634	1	285340	+		22318	28228	15060	15070	25651	25651					0.048032847138983925
KNANASLVY	9	Unmodified	_KNANASLVY_					0	0	0		ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.2643127441406	2	490.263999	978.513445	-1.402	-0.00068735	1.3206	0.00064743	-0.08143	-3.9922E-05	490.26450195595595	39.405	1.3647	39.959	39.36	40.724	0.5545					64	31	3	0	0	0	0.58668	1	3346	3346		47.657	9.8458	1	486150			22319	3586	15061	15071	25652	25652					0.023328834091330464
KNAPAIIF	8	Unmodified	_KNAPAIIF_					0	0	0		ENST00000493886.5_1_9:35062192-35072350:-|nuORF;ENSG00000165280|ENST00000358901|VCP	ENST00000493886.5_1_9:35062192-35072350:-|nuORF	ENST00000493886.5_1_9:35062192-35072350:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2646179199219	2	437.263271	872.511988	2.8534	0.0012477	2.2102	0.00096646	5.0637	0.0022142	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.86791	1	1281	1281		28.254	6.2944	1	21873000			22320	6066	15062	15072	25653	25653					0.07063294111026153
KNAQEALQAIE	11	Unmodified	_KNAQEALQAIE_					0	0	0		ENSG00000184575|ENST00000332707|XPOT;ENST00000449426.1_1_7:56356827-56358135:+|nuORF;ENST00000443317.1_1_20:32802260-32803361:-|nuORF	ENSG00000184575|ENST00000332707|XPOT	ENSG00000184575|ENST00000332707|XPOT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	607.8218383789062	2	607.822409	1213.63027	-1.5994	-0.00097214	1.4486	0.00088047	-0.15082	-9.1669E-05	607.8234990043023	58.505	0.43245	58.539	58.367	58.799	0.033905					20	14	2	0	0	0	0.59499	1	5392	5392		45.022	0.64502	1	100890			22321	7625	15063	15073	25654	25654					0.031995768382330425
KNASKRLSA	9	Unmodified	_KNASKRLSA_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7909851074219	2	487.790715	973.566878	-0.48923	-0.00023864	0.34108	0.00016637	-0.14815	-7.2268E-05	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.74721	1	9867	9867		37.159	1.9584	1	1599600	+		22322	20661	15064	15074	25655	25655					0.07903680911658739
KNASKRLSA	9	Unmodified	_KNASKRLSA_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7908020019531	2	487.790715	973.566878	-0.24073	-0.00011743	0.15721	7.6687E-05	-0.083519	-4.074E-05	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.74721	1	9901	9901		37.159	5.2042	1	1981400	+		22323	20661	15064	15074	25656	25656					0.07903680911658739
KNATIKLQSTV	11	Unmodified	_KNATIKLQSTV_					0	0	0		ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	601.859375	2	601.858795	1201.70304	-1.2832	-0.00077232	-0.42174	-0.00025383	-1.705	-0.0010262	601.8583669122717	103.38	2.0705	103.5	103.11	105.18	0.11494					139	51	4	0	0	0	0.70737	1	10833	10833		30.318	4.7437	1	2503700			22324	1155	15065	15075	25657	25657					0.11025330631628094
KNAVLGLP	8	Unmodified	_KNAVLGLP_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2568664550781	2	406.255446	810.496338	0.39517	0.00016054	3.208	0.0013033	3.6032	0.0014638	406.25661798845596	63.512	1.6179	63.635	62.353	63.971	0.12252					105	73	2	0	0	0	0.81548	1	5550	5550		20.482	2.1574	1	97662			22325	6613	15066	15076	25658	25658					0.08351007593978466
KNAVLGLP	8	Unmodified	_KNAVLGLP_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.859	-0.00075522	5.4479	0.0022132	3.5889	0.001458	406.2575260997698	63.639	0.85973	63.759	63.532	64.392	0.12004	0.062204	0.0011419	NaN	20.482	56	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112540			22326	6613	15066	15076							0.08351007593978466
KNAVLGLP	8	Unmodified	_KNAVLGLP_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	406.255446	810.496338	0.65527	0.00026621	3.0394	0.0012348	3.6947	0.001501	406.25654638425726	63.484	1.9882	63.871	63.574	65.562	0.3868	0.17364	-0.00081501	NaN	20.482	75	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83489			22327	6613	15066	15076							0.08351007593978466
KNAVVVVPLRT	11	Unmodified	_KNAVVVVPLRT_					0	0	0			REV__ENSG00000128045|ENST00000248706|RASL11B	REV__ENSG00000128045|ENST00000248706|RASL11B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.382080078125	2	598.379697	1194.74484	0.38806	0.00023221	2.9197	0.0017471	3.3077	0.0019793	598.3812845043491	40.552	1.126	40.504	40.15	41.276	-0.04789					105	43	3	0	0	0	0.76699	1	2618	2618		18.262	0.89712	1	664060	+		22328	18760	15067	15077	25659	25659					0.15525931110823876
KNCNKHDGRGI	11	Unmodified	_KNCNKHDGRGI_					0	0	0		ENST00000401044.7_1_1:59134235-59156019:-|nuORF;nc|ENSG00000162601|Q5VVJ2-2|MYSM1;ENSG00000162601|ENST00000472487|MYSM1	ENST00000401044.7_1_1:59134235-59156019:-|nuORF	ENST00000401044.7_1_1:59134235-59156019:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.314208984375	2	621.31202	1240.60949	-0.48747	-0.00030287	3.1932	0.001984	2.7057	0.0016811	621.3138017387486	68.778	0.94327	68.741	68.457	69.4	-0.036301					71	37	3	0	0	0	0.67778	1	6657	6657		35.152	0.97948	1	439870			22329	5703	15068	15078	25660	25660					-0.0011929202241844905
KNCNSTETCQ	10	Unmodified	_KNCNSTETCQ_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.2322998046875	2	564.22643	1126.43831	0.4183	0.00023602	3.6761	0.0020741	4.0944	0.0023101	564.227105108019	78	0.40626	78.563	78.295	78.701	0.56332					13	9	2	0	0	0	0.37624	1	8940	8940		49.442	25.239	1	102480			22330	1466	15069	15079	25661	25661					-0.11985410175907418
KNCSRMQLI	9	Unmodified	_KNCSRMQLI_					0	0	0			REV__ENSG00000110721|ENST00000265689|CHKA	REV__ENSG00000110721|ENST00000265689|CHKA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.7694702148438	2	546.786261	1091.55797	-1.7118	-0.00093599	2.3544	0.0012873	0.64255	0.00035134	546.7872943888048	43.722	0.56872	44.495	44.223	44.792	0.7738					22	13	2	0	0	0	0.20789	1	4004	4004		37.812	14.769	1	582410	+		22331	17828	15070	15080	25662	25662					0.01585247959337721
KNCTSISGDLH	11	Unmodified	_KNCTSISGDLH_					0	0	0		ENSG00000146648|ENST00000275493|EGFR;nc|ENSG00000146648|P00533-2|EGFR;nc|ENSG00000146648|P00533-4|EGFR;nc|ENSG00000146648|P00533-3|EGFR	ENSG00000146648|ENST00000275493|EGFR	ENSG00000146648|ENST00000275493|EGFR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	587.7800903320312	2	587.779687	1173.54482	-2.076	-0.0012202	2.5323	0.0014884	0.45635	0.00026823	587.7813286876826	63.678	0.45704	63.705	63.453	63.91	0.027138					30	16	2	0	0	0	0.6921	1	5951	5951		32.812	0	1	147640			22332	4854	15071	15081	25663	25663					-0.035009116190849454
KNCVWMLSIL	10	Carbamidomethyl (C)	_KNC(Carbamidomethyl (C))VWMLSIL_	KNC(1)VWMLSIL		KNC(56)VWMLSIL		0	1	0			REV__ENSG00000214376|ENST00000409977|VSTM5	REV__ENSG00000214376|ENST00000409977|VSTM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.89111328125	3	421.891122	1262.65154	-1.8665	-0.00078747	2.482	0.0010471	0.61548	0.00025966	421.8920663173041	29.324	1.0664	29.391	29.078	30.145	0.066727					131	48	5	0	0	0	0.49268	1	1257	1257		56.434	17.68	1	728440	+		22333	23652	15072	15082	25664	25664	286				0.030715473417558314
KNDDGWYE	8	Unmodified	_KNDDGWYE_					0	0	0		ENSG00000138443|ENST00000261018|ABI2;nc|ENSG00000138443|Q9NYB9|ABI2;nc|ENSG00000138443|Q9NYB9-3|ABI2;ENST00000441061.5_2_2:204231693-204292072:+|nuORF;nc|ENSG00000138443|Q9NYB9-4|ABI2;nc|ENSG00000138443|Q9NYB9-2|ABI2;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;ENSG00000136754|ENST00000376140|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1	ENSG00000138443|ENST00000261018|ABI2	ENSG00000138443|ENST00000261018|ABI2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.8109130859375	2	513.711796	1025.40904	-0.24511	-0.00012592	3.3634	0.0017278	3.1183	0.0016019	513.7134229507454	27.662	0.74595	27.565	27.183	27.929	-0.096947					28	16	2	0	0	0	0.4196	1	1651	1651		24.203	4.206	1	243490			22334	4296	15073	15083	25665	25665					-0.10264863138240798
KNDKRRIP	8	Unmodified	_KNDKRRIP_					0	0	0			REV__ENSG00000156966|ENST00000287590|B3GNT7	REV__ENSG00000156966|ENST00000287590|B3GNT7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.807861328125	2	513.811982	1025.60941	-1.3396	-0.00068828	-4.0211	-0.0020661	-5.3607	-0.0027544	513.8097904108414	55.315	1.3714	55.315	54.869	56.24	0					65	40	2	0	0	0	0.85277	1	4699	4699		25.45	1.2474	1	101120	+		22335	20518	15074	15084	25666	25666					0.09763076039894258
KNEEAKADQ	9	Unmodified	_KNEEAKADQ_					0	0	0			REV__ENSG00000103353|ENST00000395878|UBFD1	REV__ENSG00000103353|ENST00000395878|UBFD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7543334960938	2	516.751453	1031.48835	0.018515	9.5677E-06	4.0258	0.0020804	4.0444	0.0020899	516.7533548493163	66.222	0.83353	66.773	66.447	67.281	0.55071					39	23	2	0	0	0	0.69624	1	7247	7247		40.778	0.20554	1	315450	+		22336	17409	15075	15085	25667	25667					-0.02613216184090561
KNEEKKKGAWG	11	Unmodified	_KNEEKKKGAWG_					0	0	0			REV__chr14:19307111-19331835|51|39.51|0.99|5.32|-|2|DUXAP10,DUXAP10|1	REV__chr14:19307111-19331835|51|39.51|0.99|5.32|-|2|DUXAP10,DUXAP10|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.8458251953125	2	637.846219	1273.67788	1.438	0.00091722	-2.4952	-0.0015915	-1.0572	-0.00067431	637.8446527464371	43.773	1.3238	43.781	43.309	44.632	0.0084534					84	31	4	0	0	0	0.14238	1	3026	3026		82.75	4.4867	1	2342900	+		22337	15585	15076	15086	25668	25668					0.05199275829090766
KNEEKKKGAWG	11	Unmodified	_KNEEKKKGAWG_					0	0	0			REV__chr14:19307111-19331835|51|39.51|0.99|5.32|-|2|DUXAP10,DUXAP10|1	REV__chr14:19307111-19331835|51|39.51|0.99|5.32|-|2|DUXAP10,DUXAP10|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	637.844970703125	2	637.846219	1273.67788	0.42263	0.00026957	-1.4389	-0.00091778	-1.0162	-0.0006482	637.8452388757121	43.672	1.1051	43.729	43.397	44.503	0.056744					60	26	3	0	0	0	0.05483	2	3014	3014;3049		101.25	7.6382	1	2414200	+		22338	15585	15076	15086	25669;25670	25669					0.05199275829090766
KNEEKKKGAWG	11	Unmodified	_KNEEKKKGAWG_					0	0	0			REV__chr14:19307111-19331835|51|39.51|0.99|5.32|-|2|DUXAP10,DUXAP10|1	REV__chr14:19307111-19331835|51|39.51|0.99|5.32|-|2|DUXAP10,DUXAP10|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	637.846219	1273.67788	0.2594	0.00016546	-1.6373	-0.0010443	-1.3779	-0.00087887	638.3467791551085	43.81	0.33042	43.784	43.604	43.934	-0.026764	0.051969	-5.2605E-05	NaN	101.25	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54808	+		22339	15585	15076	15086							0.05199275829090766
KNEGVDVTSL	10	Unmodified	_KNEGVDVTSL_					0	0	0		nc|ENSG00000214193|A4FU49|SH3D21;nc|ENSG00000214193|A4FU49-3|SH3D21;ENSG00000214193|ENST00000453908|SH3D21	nc|ENSG00000214193|A4FU49|SH3D21	nc|ENSG00000214193|A4FU49|SH3D21	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8025512695312	2	531.277303	1060.54005	-0.28449	-0.00015114	3.1046	0.0016494	2.8202	0.0014983	531.278850147411	53.398	0.62433	54.013	53.696	54.321	0.61436					29	14	3	0	0	0	0.37624	1	5386	5386		27.047	12.383	1	280560			22340	8620	15077	15087	25671	25671					0.012205275098040147
KNEKLKFSI	9	Unmodified	_KNEKLKFSI_					0	0	0		ENST00000482866.5_1_7:76941390-76943837:-|nuORF;ENST00000474686.5_1_7:76940677-76943837:-|nuORF;nc|ENSG00000186088|A4D1B5-4|GSAP;ENSG00000186088|ENST00000257626|GSAP	ENST00000482866.5_1_7:76941390-76943837:-|nuORF	ENST00000482866.5_1_7:76941390-76943837:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8303833007812	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.75725	1	9240	9240		36.447	2.2742	1	6402500			22341	7771	15078	15088	25672	25672					0.10094577919812764
KNEKLLSKAS	10	Unmodified	_KNEKLLSKAS_					0	0	0		nc|ENSG00000164197|Q86T96-2|RNF180;ENSG00000164197|ENST00000389100|RNF180	nc|ENSG00000164197|Q86T96-2|RNF180	nc|ENSG00000164197|Q86T96-2|RNF180	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.333984375	2	559.332413	1116.65027	-1.0198	-0.00057042	3.7544	0.0021	2.7346	0.0015295	559.3344475575373	42.539	0.52462	42.972	42.646	43.17	0.4334					21	12	2	0	0	0	0.76096	1	3803	3803		41.427	3.6151	1	755020			22342	5937	15079	15089	25673	25673					0.09661372568848492
KNEKLLSKAS	10	Unmodified	_KNEKLLSKAS_					0	0	0		nc|ENSG00000164197|Q86T96-2|RNF180;ENSG00000164197|ENST00000389100|RNF180	nc|ENSG00000164197|Q86T96-2|RNF180	nc|ENSG00000164197|Q86T96-2|RNF180	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.3338012695312	2	559.332413	1116.65027	-0.033266	-1.8607E-05	3.2771	0.001833	3.2438	0.0018144	559.3341809592414	63.698	1.6782	64.085	63.314	64.992	0.38681					59	38	2	0	0	0	0.24988	1	6854	6854		78.264	16.573	1	1917400			22343	5937	15079	15089	25674	25674					0.09661372568848492
KNEKLLSKAS	10	Unmodified	_KNEKLLSKAS_					0	0	0		nc|ENSG00000164197|Q86T96-2|RNF180;ENSG00000164197|ENST00000389100|RNF180	nc|ENSG00000164197|Q86T96-2|RNF180	nc|ENSG00000164197|Q86T96-2|RNF180	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.3346557617188	2	559.332413	1116.65027	0.24055	0.00013455	3.039	0.0016998	3.2796	0.0018344	559.3340611599375	63.586	1.1315	64.14	63.598	64.729	0.5545					46	26	2	0	0	0	0.62712	1	6835	6835		48.602	2.1448	1	1971700			22344	5937	15079	15089	25675	25675					0.09661372568848492
KNEKPLQIKNT	11	Unmodified	_KNEKPLQIKNT_					0	0	0			REV__ENSG00000163689|ENST00000482387|CFAP20DC	REV__ENSG00000163689|ENST00000482387|CFAP20DC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.25762939453125	3	438.257626	1311.75105	-2.0264	-0.0008881	2.1632	0.00094804	0.13677	5.994E-05	438.2585447663128	30.099	0.96018	30.099	29.739	30.699	0					100	33	5	0	0	0	0.73647	1	1363	1363		25.068	0.79185	1	863580	+		22345	20958	15080	15090	25676	25676					0.10764404551696316
KNEKPLQIKNT	11	Unmodified	_KNEKPLQIKNT_					0	0	0			REV__ENSG00000163689|ENST00000482387|CFAP20DC	REV__ENSG00000163689|ENST00000482387|CFAP20DC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2575988769531	3	438.257626	1311.75105	-1.2137	-0.00053193	1.0715	0.00046958	-0.14227	-6.235E-05	438.25809944136427	29.692	1.312	29.713	29.307	30.619	0.020784					97	29	5	0	0	0	0.70278	1	1885	1885		31.068	1.5174	1	6019900	+		22346	20958	15080	15090	25677	25677					0.10764404551696316
KNELLRALSR	10	Unmodified	_KNELLRALSR_					0	0	0			REV__ENSG00000232040|ENST00000452236|SCAND3	REV__ENSG00000232040|ENST00000452236|SCAND3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5801086425781	3	400.578811	1198.7146	3.4047	0.0013639	0.5947	0.00023823	3.9995	0.0016021	400.578997947783	111.61	0.85251	111.65	111	111.85	0.041832					50	28	2	0	0	0	0.86014	1	13489	13489		23.378	2.3457	1	3662700	+		22347	23768	15081	15091	25678	25678					0.12319572445630911
KNETDRTW	8	Unmodified	_KNETDRTW_					0	0	0			REV__ENSG00000077420|ENST00000376236|APBB1IP	REV__ENSG00000077420|ENST00000376236|APBB1IP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	525.2549438476562	2	525.254163	1048.49377	0.24693	0.0001297	0.091109	4.7855E-05	0.33804	0.00017756	525.2538659727306	38.005	0.57835	37.947	37.673	38.252	-0.057915					36	18	3	0	0	0	0.87479	1	2229	2229		30.504	2.2494	1	153030	+		22348	16747	15082	15092	25679	25679					-0.02853492601616381
KNFARWLL	8	Unmodified	_KNFARWLL_					0	0	0		ENST00000513207.2_1_11:78135703-78135772:-|nuORF	ENST00000513207.2_1_11:78135703-78135772:-|nuORF	ENST00000513207.2_1_11:78135703-78135772:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2770385742188	2	524.308544	1046.60253	2.8055	0.0014709	-1.2675	-0.00066458	1.5379	0.00080635	524.306941611097	25.602	0.45848	25.171	25.109	25.568	-0.4311					14	10	2	0	0	0	0.4196	1	1350	1350		46.766	6.1938	1	130410			22349	13047	15083	15093	25680	25680					0.0810976315933658
KNFFTRLF	8	Unmodified	_KNFFTRLF_					0	0	0			REV__ENST00000396060.6_1_15:59931067-59931148:-|nuORF	REV__ENST00000396060.6_1_15:59931067-59931148:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.3032836914062	2	536.800552	1071.58655	0.13037	6.9984E-05	-2.6223	-0.0014077	-2.492	-0.0013377	536.7974000429033	56.942	0.95939	57.497	57.006	57.965	0.55513					55	22	4	0	0	0	0.93529	1	5906	5906		52.299	7.7681	1	1016200	+		22350	26133	15084	15094	25681	25681					0.05362056922399461
KNFLLSRIYW	10	Unmodified	_KNFLLSRIYW_					0	0	0		nc|ENSG00000204616|Q9BZY9-2|TRIM31;ENSG00000204616|ENST00000376734|TRIM31	nc|ENSG00000204616|Q9BZY9-2|TRIM31	nc|ENSG00000204616|Q9BZY9-2|TRIM31	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7612609863281	3	447.255557	1338.74484	-0.054257	-2.4267E-05	3.4316	0.0015348	3.3773	0.0015105	447.59049057840264	23.708	0.16633	23.326	23.199	23.365	-0.38178					5	3	2	0	0	0	0.37624	1	1067	1067		21.686	0	1	16476			22351	8468	15085	15095	25682	25682					0.08901931110858641
KNFMQILVLYK	11	Unmodified	_KNFMQILVLYK_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2731628417969	3	466.272219	1395.79483	-1.0544	-0.00049162	3.7442	0.0017458	2.6899	0.0012542	466.27392611650356	69.039	0.77501	69.174	68.804	69.579	0.13521					98	34	4	0	0	0	0.67762	1	6240	6240		35.178	1.2566	1	1223200	+		22352	16117	15086	15096	25683	25683					0.11276297724475626
KNFQDSHR	8	Unmodified	_KNFQDSHR_					0	0	0		MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|23|1|sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|23|1|sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|23|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3136596679688	2	516.254497	1030.49444	0.30343	0.00015665	-0.96759	-0.00049952	-0.66415	-0.00034287	516.2537182445653	30.132	0.30585	30.042	29.917	30.223	-0.089544					10	6	2	0	0	0	0.4196	1	1966	1966		37.159	5.6293	1	66312			22353	14713	15087	15097	25684	25684					-0.019586531619097514
KNGAASPTKK	10	Unmodified	_KNGAASPTKK_					0	0	0		nc|ENSG00000178804|Q8IZA3-2|H1-8;ENSG00000178804|ENST00000324382|H1-8	nc|ENSG00000178804|Q8IZA3-2|H1-8	nc|ENSG00000178804|Q8IZA3-2|H1-8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.289794921875	2	501.290548	1000.56654	0.16565	8.304E-05	-0.064258	-3.2212E-05	0.10139	5.0828E-05	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.8545	1	9966	9966		36.447	2.2742	1	2717900			22354	7225	15088	15098	25685	25685					0.06628261191792717
KNGGGVGG	8	Unmodified	_KNGGGVGG_					0	0	0		ENSG00000183779|ENST00000331569|ZNF703	ENSG00000183779|ENST00000331569|ZNF703	ENSG00000183779|ENST00000331569|ZNF703	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.3720703125	1	645.331464	644.324188	-0.38612	-0.00024917	3.7846	0.0024424	3.3985	0.0021932	645.333812215403	66.829	0.73917	66.881	66.346	67.085	0.052376					41	33	2	0	0	0	0.4196	1	5894	5894		3.9852	0	1	147420			22355	7561	15089	15099	25686	25686					-0.01220144093520048
KNGGPFIV	8	Unmodified	_KNGGPFIV_					0	0	0			REV__nc|ENSG00000161911|Q86YW5-3|TREML1	REV__nc|ENSG00000161911|Q86YW5-3|TREML1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.9244689941406	2	416.239796	830.465038	0.67901	0.00028263	-0.61883	-0.00025758	0.060178	2.5048E-05	416.2393568159491	29.117	0.56097	28.944	28.674	29.235	-0.17336					22	12	2	0	0	0	0.4196	1	1797	1797		28.254	6.5519	1	185310	+		22356	20783	15090	15100	25687	25687					0.043024345598951186
KNGKEKLEN	9	Unmodified	_KNGKEKLEN_					0	0	0			REV__nc|ENSG00000168439|P31948-3|STIP1	REV__nc|ENSG00000168439|P31948-3|STIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2930908203125	2	530.293288	1058.57202	-1.5163	-0.00080409	1.7205	0.00091237	0.2042	0.00010828	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.58668	1	9000	9000		47.657	8.4045	1	1686700	+		22357	21487	15091	15101	25688	25688					0.04507939983614051
KNGKGKGKFR	10	Unmodified	_KNGKGKGKFR_					0	0	0			REV__ENSG00000138385|ENST00000260956|SSB	REV__ENSG00000138385|ENST00000260956|SSB	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3384399414062	2	560.340907	1118.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.39	1	106.37	105.87	106.87	-0.025146								0	0	0	0.45132	1	11545	11545		32.812	0	1		+		22358	19468	15092	15102	25689	25689					0.11267337965296065
KNGKGKGKFR	10	Unmodified	_KNGKGKGKFR_					0	0	0			REV__ENSG00000138385|ENST00000260956|SSB	REV__ENSG00000138385|ENST00000260956|SSB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3404541015625	2	560.340907	1118.66726	0.86176	0.00048288	-2.22	-0.001244	-1.3582	-0.00076107	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.8651	1	11114	11114		25.574	3.6142	1	126390000	+		22359	19468	15092	15102	25690	25690					0.11267337965296065
KNGLIMKEV	9	Unmodified	_KNGLIMKEV_					0	0	0			REV__ENST00000587156.5_1_19:16222711-16238468:+|nuORF	REV__ENST00000587156.5_1_19:16222711-16238468:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2999267578125	2	516.299527	1030.5845	-0.37711	-0.0001947	0.026755	1.3813E-05	-0.35036	-0.00018089	516.2998075146065	62.799	1.3838	63.187	62.708	64.092	0.38779					58	31	3	0	0	0	0.69624	1	6792	6792		40.778	2.9666	1	306010	+		22360	21387	15093	15103	25691	25691					0.07043260122304673
KNGLSSRLSA	10	Unmodified	_KNGLSSRLSA_					0	0	0			REV__AluSp_dup44932|chr19:1598263-1598561:+|1.7883973533681126|0.1985418116755987|3.17|63.0|11|3|sense	REV__AluSp_dup44932|chr19:1598263-1598561:+|1.7883973533681126|0.1985418116755987|3.17|63.0|11|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7932739257812	2	516.793455	1031.57236	0.70992	0.00036688	-0.71288	-0.00036841	-0.0029593	-1.5293E-06	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.54701	1	8734	8734		52.937	17.318	1	842420	+		22361	15386	15094	15104	25692	25692					0.05783359703491442
KNGMKDRMS	9	Unmodified	_KNGMKDRMS_					0	0	0		nc|ENSG00000172752|A8TX70-2|COL6A5;ENSG00000172752|ENST00000373157|COL6A5;nc|ENSG00000172752|A8TX70|COL6A5	nc|ENSG00000172752|A8TX70-2|COL6A5	nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.758544921875	2	533.760243	1065.50593	0.78849	0.00042086	-3.8769	-0.0020693	-3.0884	-0.0016485	533.7579263674221	23.484	0.56159	23.102	22.845	23.407	-0.38178					25	12	3	0	0	0	0.55097	1	1052	1052		49.442	5.3247	1	159660			22362	6790	15095	15105	25693	25693					-0.024199154544476187
KNGQGWVPSN	10	Unmodified	_KNGQGWVPSN_					0	0	0		nc|ENSG00000143322|P42684-2|ABL2;nc|ENSG00000143322|P42684-6|ABL2;nc|ENSG00000143322|P42684-3|ABL2;ENSG00000143322|ENST00000502732|ABL2;nc|ENSG00000143322|P42684-4|ABL2;nc|ENSG00000143322|P42684-7|ABL2;nc|ENSG00000143322|P42684-10|ABL2;nc|ENSG00000143322|P42684-5|ABL2;ENST00000509520.5_1_1:179086401-179112191:-|nuORF;ENST00000504324.1_1_1:179086401-179112191:-|nuORF;nc|ENSG00000143322|P42684-8|ABL2;ENSG00000097007|ENST00000318560|ABL1;nc|ENSG00000097007|P00519-2|ABL1	nc|ENSG00000143322|P42684-2|ABL2	nc|ENSG00000143322|P42684-2|ABL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.7686767578125	2	543.76998	1085.52541	0.49378	0.0002685	-0.13176	-7.1647E-05	0.36202	0.00019686	543.7697480604253	22.73	0.42283	22.671	22.443	22.866	-0.05867					22	14	2	0	0	0	0.86348	1	748	748		31.53	1.2121	1	55310			22363	4618	15096	15106	25694	25694					-0.013934998476770488
KNGRPRRT	8	Unmodified	_KNGRPRRT_					0	0	0		chr9:19200792-19379487|34|23.24|0.14|7.38|-|1|None,RPS6|1	chr9:19200792-19379487|34|23.24|0.14|7.38|-|1|None,RPS6|1	chr9:19200792-19379487|34|23.24|0.14|7.38|-|1|None,RPS6|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.79559326171875	2	492.794124	983.573694	0.40467	0.00019942	2.1093	0.0010394	2.5139	0.0012388	492.7951001044311	22.87	0.67876	22.259	21.99	22.669	-0.6107					37	16	3	0	0	0	0.93529	1	990	990		52.299	17.147	1	541190			22364	529	15097	15107	25695	25695					0.08125038582875277
KNHFPRPT	8	Unmodified	_KNHFPRPT_					0	0	0		nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B	nc|ENSG00000137713|P30154-2|PPP2R1B	nc|ENSG00000137713|P30154-2|PPP2R1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.77117919921875	2	498.772326	995.530098	-0.067803	-3.3818E-05	-2.1596	-0.0010771	-2.2274	-0.0011109	498.7711815022013	107.76	0.37694	107.72	107.4	107.78	-0.042404					19	8	3	0	0	0	0.91977	1	11741	11741		45.952	7.1458	1	705880			22365	14944	15098	15108	25696	25696					0.03215429085753385
KNHPKLLLR	9	Unmodified	_KNHPKLLLR_					0	0	0		ENSG00000221866|ENST00000321063|PLXNA4;ENSG00000114554|ENST00000393409|PLXNA1;ENSG00000076356|ENST00000367033|PLXNA2;ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000221866|ENST00000321063|PLXNA4;ENSG00000076356|ENST00000367033|PLXNA2;ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000076356|ENST00000367033|PLXNA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.7484741210938	2	559.861475	1117.7084	0.25169	0.00014091	0.70256	0.00039333	0.95425	0.00053425	560.3648314245362	25.844	0.15576	25.907	25.793	25.949	0.063122					11	7	2	0	0	0	0.20789	1	951	951		23.042	1.0826	1	60569			22366	1356;3691;8675	15099	15109	25697	25697					0.15425099004801268
KNHRIIAIS	9	Unmodified	_KNHRIIAIS_					0	0	0		nc|ENSG00000143199|Q96PN6-4|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;ENSG00000143199|ENST00000367851|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.782470703125	2	526.322183	1050.62981	-0.33802	-0.00017791	1.4489	0.00076257	1.1108	0.00058466	526.3220846685382	47.235	0.47264	47.706	47.344	47.817	0.4714					14	10	2	0	0	0	0.20789	1	4475	4475		11.511	0	1	303060			22367	4611	15100	15110	25698	25698					0.10652246699692114
KNHWWSHPL	9	Unmodified	_KNHWWSHPL_					0	0	0		nc|ENSG00000164796|Q7Z407-5|CSMD3;nc|ENSG00000164796|Q7Z407-3|CSMD3;nc|ENSG00000164796|Q7Z407-4|CSMD3;nc|ENSG00000164796|Q7Z407-2|CSMD3;ENSG00000164796|ENST00000297405|CSMD3	nc|ENSG00000164796|Q7Z407-5|CSMD3	nc|ENSG00000164796|Q7Z407-5|CSMD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	602.8018798828125	2	602.804157	1203.59376	-0.74749	-0.00045059	-3.9801	-0.0023992	-4.7276	-0.0028498	602.8014868217316	72.975	0.77063	73.058	72.668	73.438	0.083138					66	26	3	0	0	0	0.76255	1	6706	6706		35.618	1.4457	1	457360			22368	6004	15101	15111	25699	25699					0.0001078952284387924
KNIANKVS	8	Unmodified	_KNIANKVS_					0	0	0		ENSG00000204334|ENST00000697325|ERICH2	ENSG00000204334|ENST00000697325|ERICH2	ENSG00000204334|ENST00000697325|ERICH2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.257568359375	2	437.261259	872.507966	1.6793	0.00073427	-2.6176	-0.0011446	-0.93839	-0.00041032	437.25953158121195	29.9	0.42114	29.884	29.709	30.13	-0.015167					14	8	2	0	0	0	0.4196	1	1525	1525		31.955	0	1	14994			22369	8433	15102	15112	25700	25700					0.0666120461733044
KNIARLFV	8	Unmodified	_KNIARLFV_					0	0	0			REV__ENST00000523351.5_1_5:169188379-169509859:+|nuORF	REV__ENST00000523351.5_1_5:169188379-169509859:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8013000488281	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.86288	1	9655	9655		26.796	6.3143	1	7439400	+		22370	19148	15103	15113	25701	25701					0.1102236078503438
KNIARRISN	9	Unmodified	_KNIARRISN_					0	0	0			REV__ENSG00000206384|ENST00000358511|COL6A6	REV__ENSG00000206384|ENST00000358511|COL6A6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2882080078125	2	536.322714	1070.63087	-2.0527	-0.0011009	3.9177	0.0021011	1.865	0.0010003	536.3243880667859	41.868	0.35075	42.502	42.317	42.668	0.6339					18	8	3	0	0	0	0.20789	1	3717	3717		62.107	10.915	1	313600	+		22371	23587	15104	15114	25702	25702					0.09838461068625293
KNIDRLRP	8	Unmodified	_KNIDRLRP_					0	0	0			REV__nc|ENSG00000163554|P02549-2|SPTA1	REV__nc|ENSG00000163554|P02549-2|SPTA1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30657958984375	2	506.306532	1010.59851	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.305	1	55.396	54.896	55.896	0.091167								0	0	0	0.29596	1	4625	4625		35.618	1.4457	1		+		22372	20933	15105	15115	25703	25703					0.0936367366560944
KNIEEKVIVN	10	Unmodified	_KNIEEKVIVN_					0	0	0			REV__nc|ENSG00000142687|Q8IZA0-2|KIAA0319L	REV__nc|ENSG00000142687|Q8IZA0-2|KIAA0319L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.3440551757812	2	593.34552	1184.67649	-0.64573	-0.00038314	-1.1769	-0.00069831	-1.8226	-0.0010814	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.86802	1	11210	11210		27.047	2.8446	1	2296600	+		22373	19752	15106	15116	25704	25704					0.09153641740317653
KNIFKGKRCN	10	Unmodified	_KNIFKGKRCN_					0	0	0		ENST00000606974.5_1_13:52749836-52760885:-|nuORF	ENST00000606974.5_1_13:52749836-52760885:-|nuORF	ENST00000606974.5_1_13:52749836-52760885:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.246826171875	3	403.229125	1206.66555	-1.7909	-0.00072214	1.0623	0.00042837	-0.72853	-0.00029377	403.56461282168425	104.23	0.35747	104.4	104.14	104.5	0.17096					12	8	2	0	0	0	0.37624	1	11053	11053		20.837	0	1	111220			22374	14455	15107	15117	25705	25705					0.07047960885051907
KNIHTVKK	8	Unmodified	_KNIHTVKK_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.3070068359375	2	484.306001	966.597449	0.22608	0.00010949	-0.43109	-0.00020878	-0.20502	-9.9292E-05	484.30564451882566	31.894	0.47249	32.001	31.717	32.189	0.10707					27	10	3	0	0	0	0.66521	1	2200	2200		68.787	8.4929	1	368050			22375	3524	15108	15118	25706	25706					0.11281459296708363
KNIINKASSA	10	Unmodified	_KNIINKASSA_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303466796875	2	523.303655	1044.59276	-0.041206	-2.1563E-05	-0.13765	-7.2034E-05	-0.17886	-9.3597E-05	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.86348	1	8974	8974		31.53	2.3803	1	12431000	+		22376	20661	15109	15119	25707	25707					0.07224530363282611
KNIINKASSA	10	Unmodified	_KNIINKASSA_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3040771484375	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.86587	1	9101	9101		29.17	4.6509	1	13442000	+		22377	20661	15109	15119	25708	25708					0.07224530363282611
KNIKSIFIITF	11	Unmodified	_KNIKSIFIITF_					0	0	0		ENST00000462992.1_1_1:171292253-171302174:+|nuORF	ENST00000462992.1_1_1:171292253-171302174:+|nuORF	ENST00000462992.1_1_1:171292253-171302174:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.9390563964844	3	441.939346	1322.79621	0.63201	0.00027931	0.44307	0.00019581	1.0751	0.00047512	441.93938161315157	55.264	1.2271	55.292	54.682	55.909	0.027142					77	31	3	0	0	0	0.78083	1	4906	4906		15.337	1.8295	1	422510			22378	12057	15110	15120	25709	25709					0.14772255084858443
KNIKVIMA	8	Unmodified	_KNIKVIMA_					0	0	0		ENST00000579147.5_1_17:61906826-61909326:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5;ENSG00000087191|ENST00000310144|PSMC5	ENST00000579147.5_1_17:61906826-61909326:+|nuORF	ENST00000579147.5_1_17:61906826-61909326:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7880554199219	2	458.786056	915.557558	0.6747	0.00030954	3.1519	0.0014461	3.8266	0.0017556	458.78743118260775	92.703	1.6363	93.149	92.689	94.326	0.44662					124	39	4	0	0	0	0.88915	1	11157	11157		35.201	4.6971	1	5092100			22379	1570	15111	15121	25710	25710					0.09640196301768356
KNIKVIYGP	9	Unmodified	_KNIKVIYGP_					0	0	0		ENSG00000197594|ENST00000647893|ENPP1;ENST00000459624.1_1_6:132185674-132198340:+|nuORF	ENSG00000197594|ENST00000647893|ENPP1	ENSG00000197594|ENST00000647893|ENPP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3121337890625	2	516.316035	1030.61752	-1.5618	-0.0008064	-1.828	-0.00094385	-3.3899	-0.0017503	516.315128223729	103.33	1.0546	103.45	103.07	104.12	0.11494					63	26	3	0	0	0	0.77546	1	10939	10939		31.955	4.0726	1	813320			22380	8179	15112	15122	25711	25711					0.10343210236646883
KNILFWQPKHL	11	Unmodified	_KNILFWQPKHL_					0	0	0			REV__nc|ENSG00000152942|O75943-3|RAD17	REV__nc|ENSG00000152942|O75943-3|RAD17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.2766418457031	3	475.278473	1422.81359	-1.0084	-0.00047927	0.9785	0.00046506	-0.029888	-1.4205E-05	475.2788276348761	58.492	1.5243	59.046	58.555	60.079	0.55323					118	37	4	0	0	0	0.77511	1	6127	6127		16.53	1.1924	1	2160600	+		22381	20322	15113	15123	25712	25712					0.11909595410565998
KNILGAVY	8	Unmodified	_KNILGAVY_					0	0	0		ENST00000463499.1_1_4:42474097-42474295:+|nuORF	ENST00000463499.1_1_4:42474097-42474295:+|nuORF	ENST00000463499.1_1_4:42474097-42474295:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26312255859375	2	439.260728	876.506903	0.071313	3.1325E-05	0.28002	0.000123	0.35133	0.00015433	439.26190421394375	38.891	0.1784	38.864	38.765	38.943	-0.027843					6	3	2	0	0	0	0.4196	1	2660	2660		8.8223	0	1	25524			22382	12066	15114	15124	25713	25713					0.06370990248422004
KNILREFV	8	Unmodified	_KNILREFV_					0	0	0		ENSG00000110395|ENST00000264033|CBL	ENSG00000110395|ENST00000264033|CBL	ENSG00000110395|ENST00000264033|CBL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80419921875	2	509.805834	1017.59712	-0.71562	-0.00036483	-2.7409	-0.0013973	-3.4566	-0.0017622	509.8042530749235	99.723	0.85551	99.723	99.348	100.2	0					47	20	3	0	0	0	0.884	1	10087	10087		33.516	9.3128	1	277710			22383	2526	15115	15125	25714	25714					0.08902039576844345
KNINLAVLF	9	Unmodified	_KNINLAVLF_					0	0	0		ENST00000215917.11_2_22:26887676-26887766:+|nuORF	ENST00000215917.11_2_22:26887676-26887766:+|nuORF	ENST00000215917.11_2_22:26887676-26887766:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3148803710938	2	516.316035	1030.61752	-0.017188	-8.8743E-06	-3.673	-0.0018964	-3.6902	-0.0019053	516.3144734168848	19.566	0.24886	19.493	19.361	19.61	-0.073704					9	6	2	0	0	0	0.77546	1	446	446		31.955	1.4512	1	21483			22384	9122	15116	15126	25715	25715					0.10343210236624145
KNITLIRGL	9	Unmodified	_KNITLIRGL_					0	0	0		ENSG00000171094|ENST00000389048|ALK	ENSG00000171094|ENST00000389048|ALK	ENSG00000171094|ENST00000389048|ALK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3140869140625	2	514.334759	1026.65496	0.70184	0.00036098	-0.10692	-5.4994E-05	0.59492	0.00030599	514.3345470572647	22.742	0.42842	22.132	21.91	22.339	-0.6107					11	9	2	0	0	0	0.20789	1	934	934		29.15	0	1	38952			22385	6636	15117	15127	25716	25716					0.14270301502278926
KNIVNHRY	8	Unmodified	_KNIVNHRY_					0	0	0			REV__ENSG00000218819|ENST00000405799|TDRD15	REV__ENSG00000218819|ENST00000405799|TDRD15	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	521.7454223632812	2	522.290882	1042.56721	0.26731	0.00013961	-2.045	-0.0010681	-1.7777	-0.0009285	522.2896864812647	57.596	0.40899	57.567	57.398	57.807	-0.029865					18	12	2	0	0	0	0.4196	1	5306	5306		47.916	0	1	78668	+		22386	23699	15118	15128	25717	25717					0.047631006314986735
KNIVREIF	8	Unmodified	_KNIVREIF_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80462646484375	2	509.805834	1017.59712	-0.71562	-0.00036483	-2.7409	-0.0013973	-3.4566	-0.0017622	509.8042530749235	99.723	0.85551	99.723	99.348	100.2	0					47	20	3	0	0	0	0.85277	1	10099	10099		25.45	1.2474	1	277710	+		22387	29959	15119	15129	25718	25718					0.08902039576832976
KNIVRYLGSA	10	Unmodified	_KNIVRYLGSA_					0	0	0		nc|ENSG00000142733|O95382-3|MAP3K6;ENSG00000142733|ENST00000357582|MAP3K6;nc|ENSG00000142733|O95382-2|MAP3K6	nc|ENSG00000142733|O95382-3|MAP3K6	nc|ENSG00000142733|O95382-3|MAP3K6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.8263549804688	2	560.827298	1119.64004	0.41234	0.00023125	-2.2425	-0.0012576	-1.8301	-0.0010264	560.825892688675	50.894	0.58826	50.944	50.645	51.233	0.0499					49	18	3	0	0	0	0.86348	1	4029	4029		31.53	3.6476	1	1036600			22388	4582	15120	15130	25719	25719					0.08500809634256257
KNKADKLAN	9	Unmodified	_KNKADKLAN_					0	0	0			REV__ENSG00000167768|ENST00000252244|KRT1	REV__ENSG00000167768|ENST00000252244|KRT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29058837890625	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.75725	1	8909	8909		36.447	0.82846	1	9566900	+	+	22389	15979	15121	15131	25720	25720					0.06628261191792717
KNKAGGITLSD	11	Unmodified	_KNKAGGITLSD_					0	0	0		L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|106|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|106|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|106|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.306396484375	2	552.306395	1102.59824	0.26261	0.00014504	-0.18156	-0.00010027	0.081052	4.4766E-05	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.67778	1	9324	9324		35.152	0	1	1950800			22390	14643	15122	15132	25721	25721					0.05104209155092576
KNKAGGITLSD	11	Unmodified	_KNKAGGITLSD_					0	0	0		L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|106|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|106|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|106|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.306640625	2	552.306395	1102.59824	-1.4446	-0.00079788	1.6112	0.00088988	0.16659	9.2009E-05	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.66929	1	9299	9299		36.447	2.5251	1	1677300			22391	14643	15122	15132	25722	25722					0.05104209155092576
KNKAKTRVLGH	11	Unmodified	_KNKAKTRVLGH_					0	0	0		ENST00000360772.7_2_3:123332334-123332625:-|nuORF	ENST00000360772.7_2_3:123332334-123332625:-|nuORF	ENST00000360772.7_2_3:123332334-123332625:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.39013671875	2	626.385845	1250.75714	-1.2033	-0.00075372	2.5834	0.0016182	1.3801	0.00086446	626.3871390536368	109.94	1.1883	109.95	109.68	110.87	0.0060501					79	40	3	0	0	0	0.78309	1	11718	11718		14.865	0	1	879220			22392	10455	15123	15133	25723	25723					0.14178967573889167
KNKAQEKK	8	Unmodified	_KNKAQEKK_					0	0	0			REV__ENSG00000110060|ENST00000227474|PUS3	REV__ENSG00000110060|ENST00000227474|PUS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.2923889160156	2	487.293091	972.571629	-0.70314	-0.00034264	0.88419	0.00043086	0.18105	8.8225E-05	487.29338906256316	90.865	2.6767	91.083	90.551	93.228	0.21736					133	64	3	0	0	0	0.89043	1	9131	9131		35.618	1.4457	1	1731200	+		22393	17791	15124	15134	25724	25724					0.08424565054417599
KNKDIFGIVS	10	Unmodified	_KNKDIFGIVS_					0	0	0			REV__ENST00000583611.5_1_17:31061878-31076003:-|nuORF	REV__ENST00000583611.5_1_17:31061878-31076003:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3392944335938	2	560.821681	1119.62881	-1.1916	-0.00066827	-1.9532	-0.0010954	-3.1448	-0.0017637	560.8204655858618	89.361	0.82417	89.832	89.274	90.098	0.47068					33	19	2	0	0	0	0.37624	1	10610	10610		23.523	0	1	155390	+		22394	22140	15125	15135	25725	25725					0.07377987540144204
KNKEIKIEP	9	Unmodified	_KNKEIKIEP_					0	0	0		ENST00000591330.5_1_17:40855746-40879722:-|nuORF;nc|ENSG00000108799|Q92800-5|EZH1;ENST00000585912.5_1_17:40855746-40880959:-|nuORF;nc|ENSG00000108799|Q92800-4|EZH1;ENST00000586103.5_1_17:40855746-40880959:-|nuORF;nc|ENSG00000108799|Q92800-3|EZH1;ENSG00000108799|ENST00000428826|EZH1;nc|ENSG00000108799|Q92800-2|EZH1	ENST00000591330.5_1_17:40855746-40879722:-|nuORF	ENST00000591330.5_1_17:40855746-40879722:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.8297119140625	2	549.829506	1097.64446	-1.509	-0.0008297	1.0078	0.00055412	-0.50121	-0.00027558	549.829981948683	48.545	1.2936	49.015	48.546	49.84	0.46941					84	31	4	0	0	0	0.0034731	1	4709	4709		138.83	4.0148	1	6848200			22395	2432	15126	15136	25726	25726					0.09954274057167822
KNKEIKIEP	9	Unmodified	_KNKEIKIEP_					0	0	0		ENST00000591330.5_1_17:40855746-40879722:-|nuORF;nc|ENSG00000108799|Q92800-5|EZH1;ENST00000585912.5_1_17:40855746-40880959:-|nuORF;nc|ENSG00000108799|Q92800-4|EZH1;ENST00000586103.5_1_17:40855746-40880959:-|nuORF;nc|ENSG00000108799|Q92800-3|EZH1;ENSG00000108799|ENST00000428826|EZH1;nc|ENSG00000108799|Q92800-2|EZH1	ENST00000591330.5_1_17:40855746-40879722:-|nuORF	ENST00000591330.5_1_17:40855746-40879722:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.8294677734375	2	549.829506	1097.64446	-0.21968	-0.00012078	-0.18537	-0.00010192	-0.40505	-0.00022271	549.8292765702838	48.371	0.96567	49.276	48.963	49.929	0.90424					63	23	4	0	0	0	0.038282	2	4700	4700;4713		113.41	10.657	1	6897500			22396	2432	15126	15136	25727;25728	25727					0.09954274057167822
KNKEQSKAI	9	Unmodified	_KNKEQSKAI_					0	0	0		nc|ENSG00000099991|Q9Y6J0-2|CABIN1;ENSG00000099991|ENST00000263119|CABIN1	nc|ENSG00000099991|Q9Y6J0-2|CABIN1	nc|ENSG00000099991|Q9Y6J0-2|CABIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3035278320312	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.69624	1	9572	9572		40.778	5.5774	1	13080000			22397	1781	15127	15137	25729	25729					0.07224530363282611
KNKESVRKR	9	Unmodified	_KNKESVRKR_					0	0	0			REV__nc|ENSG00000158158|Q6P4Q7-2|CNNM4	REV__nc|ENSG00000158158|Q6P4Q7-2|CNNM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	572.85009765625	2	572.849096	1143.68364	0.027736	1.5889E-05	0.70034	0.00040119	0.72807	0.00041708	572.8493920289332	16.911	0.34712	16.988	16.858	17.205	0.07715					29	14	3	0	0	0	0.77696	1	144	144		31.53	1.0262	1	138760	+		22398	20592	15128	15138	25730	25730					0.11754419131420946
KNKFGKKKV	9	Unmodified	_KNKFGKKKV_					0	0	0			REV__ENSG00000083093|ENST00000261584|PALB2	REV__ENSG00000083093|ENST00000261584|PALB2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3265991210938	2	538.850576	1075.6866	0.077832	4.194E-05	-2.6105	-0.0014066	-2.5326	-0.0013647	539.3515862832929	101.65	0.2167	101.85	101.68	101.9	0.2058					5	4	2	0	0	0	0.20789	1	10650	10650		21.96	7.095	1	18550	+		22399	16846	15129	15139	25731	25731					0.15178294256224945
KNKFISKTP	9	Unmodified	_KNKFISKTP_					0	0	0		nc|ENSG00000179912|Q9Y2K5|R3HDM2;ENSG00000179912|ENST00000402412|R3HDM2;ENST00000551465.1_1_12:57691871-57704220:-|nuORF	nc|ENSG00000179912|Q9Y2K5|R3HDM2	nc|ENSG00000179912|Q9Y2K5|R3HDM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8170166015625	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.78983	1	8770	8770		27.882	1.0861	1	4022300			22400	7302	15130	15140	25732	25732					0.09498308748334239
KNKFSIKEL	9	Unmodified	_KNKFSIKEL_					0	0	0			REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8301391601562	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.64922	1	8802	8802		44.117	3.3386	1	3935500	+		22401	29536	15131	15141	25733	25733					0.10094577919812764
KNKFSIKEL	9	Unmodified	_KNKFSIKEL_					0	0	0			REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8300170898438	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.76255	1	9072	9072		35.618	2.8059	1	1489800	+		22402	29536	15131	15141	25734	25734					0.10094577919812764
KNKFSIKEL	9	Unmodified	_KNKFSIKEL_					0	0	0			REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8292236328125	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.76255	1	8821	8821		35.618	0	1	1844500	+		22403	29536	15131	15141	25735	25735					0.10094577919812764
KNKFSIKEL	9	Unmodified	_KNKFSIKEL_					0	0	0			REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8297119140625	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.64922	1	8788	8788		44.117	3.3386	1	2008100	+		22404	29536	15131	15141	25736	25736					0.10094577919812764
KNKFSIKEL	9	Unmodified	_KNKFSIKEL_					0	0	0			REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8303833007812	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.64922	1	10681	10681		44.117	3.3386	1	5381700	+		22405	29536	15131	15141	25737	25737					0.10094577919812764
KNKFSIKEL	9	Unmodified	_KNKFSIKEL_					0	0	0			REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	REV__L1ME4a_dup26871|chr14:50478705-50479431:-|1.4532177061229417|0.0883443601993247|4.04|63.0|19|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8303833007812	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.74721	1	10719	10719		37.159	1.5408	1	5911200	+		22406	29536	15131	15141	25738	25738					0.10094577919812764
KNKGLVAI	8	Unmodified	_KNKGLVAI_					0	0	0		ENST00000462722.5_1_9:131595865-131599118:-|nuORF;nc|ENSG00000286112|Q16773-2|KYAT1;ENSG00000171097|ENST00000302586|KYAT1	ENST00000462722.5_1_9:131595865-131599118:-|nuORF	ENST00000462722.5_1_9:131595865-131599118:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.5929260253906	2	421.776545	841.538538	0.26833	0.00011318	1.043	0.00043993	1.3114	0.0005531	421.7768434929175	51.927	0.49128	52.35	52.064	52.555	0.42348					19	11	2	0	0	0	0.4196	1	5175	5175		28.254	20.564	1	475760			22407	6637	15132	15142	25739	25739					0.1114298300237806
KNKGTNIKRPL	11	Unmodified	_KNKGTNIKRPL_					0	0	0			REV__ENSG00000153317|ENST00000518721|ASAP1	REV__ENSG00000153317|ENST00000518721|ASAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8933715820312	2	634.893503	1267.77245	1.3476	0.00085558	-2.8123	-0.0017855	-1.4647	-0.0009299	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.67778	1	11717	11717		35.152	3.6222	1	42647000	+		22408	20346	15133	15143	25740	25740					0.14927834371087556
KNKGTNIKRPL	11	Unmodified	_KNKGTNIKRPL_					0	0	0			REV__ENSG00000153317|ENST00000518721|ASAP1	REV__ENSG00000153317|ENST00000518721|ASAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8919067382812	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.65746	2	11369	11369;11381		37.812	3.639	1	66671000	+		22409	20346	15133	15143	25741;25742	25741					0.14927834371087556
KNKHTKNKH	9	Unmodified	_KNKHTKNKH_					0	0	0			REV__ENST00000226319.10_1_4:129795591-129795780:+|nuORF	REV__ENST00000226319.10_1_4:129795591-129795780:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.8322143554688	2	567.828163	1133.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.036	1	94.477	93.977	94.977	0.44099								0	0	0	0.30416	1	11217	11217		29.15	0	1		+		22410	24180	15134	15144	25743	25743					0.08029863442902752
KNKIAKETN	9	Unmodified	_KNKIAKETN_					0	0	0		ENST00000589892.1_1_17:76212712-76219632:+|nuORF;nc|ENSG00000089685|O15392|BIRC5;ENSG00000089685|ENST00000350051|BIRC5;nc|ENSG00000089685|O15392-2|BIRC5	ENST00000589892.1_1_17:76212712-76219632:+|nuORF	ENST00000589892.1_1_17:76212712-76219632:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3035278320312	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.76255	1	10402	10402		35.618	4.0885	1	13160000			22411	1629	15135	15145	25744	25744					0.07224530363305348
KNKILRNTIQW	11	Unmodified	_KNKILRNTIQW_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.95184326171875	3	471.949016	1412.82522	1.8696	0.00088238	3.7398	0.001765	5.6094	0.0026474	471.95079991838713	105.05	0.63052	105.21	104.93	105.56	0.15583					36	16	3	0	0	0	0.74405	1	12804	12804		23.378	0.81632	1	234370			22412	6612	15136	15146	25745	25745					0.1353179243390059
KNKILRNTIQW	11	Unmodified	_KNKILRNTIQW_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	471.949016	1412.82522	-0.91199	-0.00043041	8.1891	0.0038648	7.2771	0.0034344	472.2877600099168	105.2	1.6164	105.36	105.04	106.66	0.15924	-0.037446	0.0048377	NaN	23.378	66	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	507290			22413	6612	15136	15146							0.1353179243390059
KNKILRNTIQW	11	Unmodified	_KNKILRNTIQW_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	471.949016	1412.82522	0.77552	0.00036601	6.8283	0.0032226	7.6038	0.0035886	472.2869725970721	105.46	1.6798	105.57	105.02	106.7	0.10766	0.17679	0.0029109	NaN	23.378	66	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	773980			22414	6612	15136	15146							0.1353179243390059
KNKILRNTIQW	11	Unmodified	_KNKILRNTIQW_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	471.949016	1412.82522	-1.7063	-0.0008053	9.5013	0.0044841	7.795	0.0036788	472.288228150346	105.5	1.5285	105.58	105.09	106.62	0.073112	0.18384	0.0066955	NaN	23.378	50	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	663930			22415	6612	15136	15146							0.1353179243390059
KNKIPYKGFI	10	Unmodified	_KNKIPYKGFI_					0	0	0		ENST00000431297.1_1_21:15134673-15136650:+|nuORF;ENSG00000141965|ENST00000269856|FEM1A	ENST00000431297.1_1_21:15134673-15136650:+|nuORF	ENST00000431297.1_1_21:15134673-15136650:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.366455078125	2	604.363516	1206.71248	3.2045	0.0019367	1.6316	0.00098609	4.8361	0.0029228	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.86338	1	11823	11823		34.173	5.0025	1	63446000			22416	4535	15137	15147	25746	25746					0.11739143707859512
KNKIVIPK	8	Unmodified	_KNKIVIPK_					0	0	0		nc|ENSG00000134779|Q68CL5-1|TPGS2;nc|ENSG00000134779|Q68CL5-4|TPGS2;ENSG00000134779|ENST00000334295|TPGS2	nc|ENSG00000134779|Q68CL5-1|TPGS2	nc|ENSG00000134779|Q68CL5-1|TPGS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.5395812988281	2	470.32112	938.627687	-0.95855	-0.00045083	0.511	0.00024034	-0.44755	-0.00021049	470.32136351710705	29.284	0.56343	29.254	28.997	29.56	-0.029209					14	12	2	0	0	0	0.4196	1	1846	1846		38.806	16.846	1	47783			22417	3959	15138	15148	25747	25747					0.15591817961887955
KNKIVIPK	8	Unmodified	_KNKIVIPK_					0	0	0		nc|ENSG00000134779|Q68CL5-1|TPGS2;nc|ENSG00000134779|Q68CL5-4|TPGS2;ENSG00000134779|ENST00000334295|TPGS2	nc|ENSG00000134779|Q68CL5-1|TPGS2	nc|ENSG00000134779|Q68CL5-1|TPGS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.5400695800781	2	470.32112	938.627687	-0.095285	-4.4814E-05	0.38792	0.00018245	0.29264	0.00013763	470.3211198536801	29.482	0.34098	29.392	29.191	29.532	-0.089546					11	7	2	0	0	0	0.4196	1	1864	1864		30.504	6.3009	1	42146			22418	3959	15138	15148	25748	25748					0.15591817961887955
KNKKHKAPAAA	11	Unmodified	_KNKKHKAPAAA_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3536376953125	2	582.354014	1162.69348	3.1755	0.0018492	-3.8614	-0.0022487	-0.68589	-0.00039943	582.3516873640681	107.33	0.84415	107.3	106.75	107.59	-0.034134					36	19	2	0	0	0	0.72918	1	11921	11921		26.693	2.1737	1	898660			22419	1181	15139	15149	25749	25749					0.11863607136797327
KNKKKLEKAM	10	Unmodified	_KNKKKLEKAM_					0	0	0		nc|ENSG00000198301|Q9NVU7-2|SDAD1;ENST00000395710.5_1_4:76871905-76902632:-|nuORF;ENSG00000198301|ENST00000356260|SDAD1;ENST00000513089.5_1_4:76886972-76894529:-|nuORF	nc|ENSG00000198301|Q9NVU7-2|SDAD1	nc|ENSG00000198301|Q9NVU7-2|SDAD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.5844421386719	3	406.584797	1216.73256	0.73403	0.00029845	-2.568	-0.0010441	-1.8339	-0.00074565	406.5836501066581	111.89	0.52492	111.96	111.59	112.12	0.069542					42	15	3	0	0	0	0.86151	1	12012	12012		15.333	1.8791	1	1799400			22420	8263	15140	15150	25750	25750					0.1328657137614755
KNKKKLEKAM	10	Unmodified	_KNKKKLEKAM_					0	0	0		nc|ENSG00000198301|Q9NVU7-2|SDAD1;ENST00000395710.5_1_4:76871905-76902632:-|nuORF;ENSG00000198301|ENST00000356260|SDAD1;ENST00000513089.5_1_4:76886972-76894529:-|nuORF	nc|ENSG00000198301|Q9NVU7-2|SDAD1	nc|ENSG00000198301|Q9NVU7-2|SDAD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24884033203125	3	406.584797	1216.73256	3.1302	0.0012727	-4.4763	-0.00182	-1.3462	-0.00054733	406.58294710234605	113.5	0.26855	113.52	113.43	113.7	0.020027					14	11	2	0	0	0	0.37624	1	13701	13701		26.063	17.656	1	24505			22421	8263	15140	15150	25751	25751					0.1328657137614755
KNKKKLFVF	9	Unmodified	_KNKKKLFVF_					0	0	0			REV__ENST00000374279.3_1_9:114696562-114696673:+|nuORF	REV__ENST00000374279.3_1_9:114696562-114696673:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3692626953125	2	576.368601	1150.72265	0.52808	0.00030437	-0.13671	-7.8794E-05	0.39137	0.00022557	576.368351063032	43.383	1.3544	43.388	42.868	44.222	0.0057526					70	33	3	0	0	0	0.77546	1	3009	3009		31.955	5.2619	1	281870	+		22422	25784	15141	15151	25752	25752					0.15331751433086538
KNKKKSKSD	9	Unmodified	_KNKKKSKSD_					0	0	0		ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8167724609375	2	531.81693	1061.61931	-0.7527	-0.0004003	0.67919	0.00036121	-0.073506	-3.9092E-05	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.76255	1	8587	8587		35.618	8.8222	1	2790600			22423	4918	15142	15152	25753	25753					0.09096219254638527
KNKKKSKSD	9	Unmodified	_KNKKKSKSD_					0	0	0		ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8167724609375	2	531.81693	1061.61931	-0.033042	-1.7573E-05	-0.093885	-4.993E-05	-0.12693	-6.7502E-05	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.69624	3	8975	8975;8987;9166		40.778	5.1599	1	4208000			22424	4918	15142	15152	25754;25755;25756	25754					0.09096219254638527
KNKKKSKSD	9	Unmodified	_KNKKKSKSD_					0	0	0		ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8168334960938	2	531.81693	1061.61931	1.8637	0.00099113	-2.0038	-0.0010657	-0.14016	-7.454E-05	531.8157444108199	88.686	4.0119	88.613	87.337	91.349	-0.07238					352	95	5	0	0	0	0.76255	7	9253	9204;9253;9275;9311;9346;9358;9383		35.618	6.2903	1	4423300			22425	4918	15142	15152	25757;25758;25759;25760;25761;25762;25763	25758					0.09096219254638527
KNKKKSKSD	9	Unmodified	_KNKKKSKSD_					0	0	0		ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8168334960938	2	531.81693	1061.61931	1.1723	0.00062347	-1.3006	-0.00069169	-0.12827	-6.8217E-05	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.69624	2	9270	9090;9270		40.778	12.896	1	4413000			22426	4918	15142	15152	25764;25765	25765					0.09096219254638527
KNKKKSKSD	9	Unmodified	_KNKKKSKSD_					0	0	0		ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8165893554688	2	531.81693	1061.61931	-0.04786	-2.5453E-05	-0.21771	-0.00011578	-0.26557	-0.00014123	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.76255	4	8914	8771;8914;8927;8964		35.618	2.8059	1	4916300			22427	4918	15142	15152	25766;25767;25768;25769	25767					0.09096219254638527
KNKKKSKSD	9	Unmodified	_KNKKKSKSD_					0	0	0		ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8169555664062	2	531.81693	1061.61931	0.7269	0.00038658	-0.87822	-0.00046705	-0.15132	-8.0475E-05	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.73802	2	8971	8792;8971		37.812	6.2817	1	4496300			22428	4918	15142	15152	25770;25771	25771					0.09096219254638527
KNKKKSKSD	9	Unmodified	_KNKKKSKSD_					0	0	0		ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.816650390625	2	531.81693	1061.61931	-1.4587	-0.00077575	1.2999	0.00069131	-0.15877	-8.4438E-05	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.76255	1	8446	8446		35.618	1.4457	1	1159800			22429	4918	15142	15152	25772	25772					0.09096219254638527
KNKKKSKSD	9	Unmodified	_KNKKKSKSD_					0	0	0		ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8168334960938	2	531.81693	1061.61931	-1.5109	-0.00080353	1.3466	0.00071615	-0.1643	-8.7379E-05	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.71772	1	8877	8877		39.253	7.723	1	4022300			22430	4918	15142	15152	25773	25773					0.09096219254638527
KNKKRKLKK	9	Unmodified	_KNKKRKLKK_					0	0	0		ENSG00000104714|ENST00000262109|ERICH1	ENSG00000104714|ENST00000262109|ERICH1	ENSG00000104714|ENST00000262109|ERICH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.4260864257812	2	585.911499	1169.80845	0.48532	0.00028436	-3.5093	-0.0020562	-3.024	-0.0017718	585.9091027655265	92.808	0.12234	93.255	93.154	93.276	0.44661					4	2	2	0	0	0	0.20789	1	11039	11039		1.2052	0	1	182220			22431	2142	15143	15153	25774	25774					0.2303333633856255
KNKKSLISN	9	Unmodified	_KNKKSLISN_					0	0	0			REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.286904904037577|0.1763547852274372|2.87|63.0|11|1|sense	REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.286904904037577|0.1763547852274372|2.87|63.0|11|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.313720703125	2	516.314023	1030.61349	2.7793	0.001435	-3.2178	-0.0016614	-0.43843	-0.00022637	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.79277	1	10673	10673		27.047	1.5971	1	67991000	+		22432	29600	15144	15154	25775	25775					0.0994112074295117
KNKKSLISN	9	Unmodified	_KNKKSLISN_					0	0	0			REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.286904904037577|0.1763547852274372|2.87|63.0|11|1|sense	REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.286904904037577|0.1763547852274372|2.87|63.0|11|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3138427734375	2	516.314023	1030.61349	0.876	0.00045229	-1.3141	-0.00067851	-0.43813	-0.00022621	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.78124	1	10997	10997		30.318	6.115	1	67025000	+		22433	29600	15144	15154	25776	25776					0.0994112074295117
KNKLQDRTRLR	11	Unmodified	_KNKLQDRTRLR_					0	0	0		ENST00000520481.1_1_8:28304597-28321161:-|nuORF;nc|ENSG00000214050|Q8IX29-2|FBXO16;ENSG00000214050|ENST00000380254|FBXO16	ENST00000520481.1_1_8:28304597-28321161:-|nuORF	ENST00000520481.1_1_8:28304597-28321161:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.6250915527344	3	476.623303	1426.84808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.69	1	117.72	117.22	118.22	0.026466								0	0	0	0.56276	1	12937	12937		12.433	2.3289	1				22434	8614	15145	15155	25777	25777					0.15172811551337873
KNKLRFLI	8	Unmodified	_KNKLRFLI_					0	0	0		nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1;ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047-2|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3137817382812	2	516.339844	1030.66514	0.80516	0.00041574	1.7305	0.00089353	2.5357	0.0013093	516.3404928715958	99.176	0.41022	99.333	99.275	99.685	0.15659					16	9	3	0	0	0	0.4196	1	10363	10363		13.775	1.5685	1	406620			22435	4624	15146	15156	25778	25778					0.1510290922749391
KNKLSHSN	8	Unmodified	_KNKLSHSN_					0	0	0			REV__ENSG00000110318|ENST00000263468|CEP126	REV__ENSG00000110318|ENST00000263468|CEP126	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2538757324219	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.91472	1	9955	9955		44.117	3.3386	1	1215000	+		22436	17806	15147	15157	25779	25779					0.027191324691784757
KNKLTLKSN	9	Unmodified	_KNKLTLKSN_					0	0	0			REV__ENST00000469300.6_1_2:128396858-128397856:-|nuORF	REV__ENST00000469300.6_1_2:128396858-128397856:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.303466796875	2	523.321848	1044.62914	1.5834	0.00082861	-0.68821	-0.00036015	0.89516	0.00046845	523.3208183703563	88.082	0.38733	88.008	87.811	88.199	-0.074005					13	8	2	0	0	0	0.20789	1	9136	9136		47.657	25.697	1	63849	+		22437	16639	15148	15158	25780	25780					0.10861407259994849
KNKNKKKAT	9	Unmodified	_KNKNKKKAT_					0	0	0			REV__ENST00000301923.13_2_22:40724958-40725066:+|nuORF	REV__ENST00000301923.13_2_22:40724958-40725066:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.3285522460938	2	530.33529	1058.65603	-0.033563	-1.78E-05	2.1948	0.001164	2.1613	0.0011462	530.3364618146385	109.54	0.2659	109.49	109.37	109.63	-0.049324					25	13	2	0	0	0	0.20789	1	11923	11923		25.574	0	1	1211700	+		22438	24775	15149	15159	25781	25781					0.12904515871173317
KNKNMFTLLI	10	Unmodified	_KNKNMFTLLI_					0	0	0			REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3549194335938	2	611.354834	1220.69511	-0.25907	-0.00015838	2.238	0.0013682	1.9789	0.0012098	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.67571	1	9352	9352		45.972	4.5456	1	3360200	+		22439	15516	15150	15160	25782	25782					0.0935948011056098
KNKNMFTLLI	10	Unmodified	_KNKNMFTLLI_					0	0	0			REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.355712890625	2	611.354834	1220.69511	-0.22744	-0.00013904	3.0108	0.0018407	2.7834	0.0017016	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.82886	2	9571	9571;9606		37.812	7.4938	1	8715400	+		22440	15516	15150	15160	25783;25784	25783					0.0935948011056098
KNKNMFTLLI	10	Unmodified	_KNKNMFTLLI_					0	0	0			REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3540649414062	2	611.354834	1220.69511	-0.40518	-0.00024771	2.2197	0.001357	1.8145	0.0011093	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.80179	1	9778	9778		39.253	5.3312	1	5373200	+		22441	15516	15150	15160	25785	25785					0.0935948011056098
KNKNMFTLLI	10	Unmodified	_KNKNMFTLLI_					0	0	0			REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3547973632812	2	611.354834	1220.69511	-0.40504	-0.00024762	3.0705	0.0018771	2.6654	0.0016295	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.82886	1	9993	9993		37.812	1.3648	1	12417000	+		22442	15516	15150	15160	25786	25786					0.0935948011056098
KNKNMFTLLI	10	Unmodified	_KNKNMFTLLI_					0	0	0			REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3543090820312	2	611.354834	1220.69511	2.1766	0.0013307	-0.33396	-0.00020417	1.8427	0.0011265	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.82886	2	10055	9912;10055		37.812	7.3622	1	5823000	+		22443	15516	15150	15160	25787;25788	25788					0.0935948011056098
KNKNMFTLLI	10	Unmodified	_KNKNMFTLLI_					0	0	0			REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.355712890625	2	611.354834	1220.69511	2.4219	0.0014807	0.063844	3.9032E-05	2.4858	0.0015197	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.73395	2	10300	10288;10300		42.864	3.2704	1	12656000	+		22444	15516	15150	15160	25789;25790	25790					0.0935948011056098
KNKNMFTLLI	10	Unmodified	_KNKNMFTLLI_					0	0	0			REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3563232421875	2	611.354834	1220.69511	0.21646	0.00013233	2.3298	0.0014243	2.5463	0.0015567	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.86218	3	10228	10108;10156;10228		32.812	3.2704	1	12399000	+		22445	15516	15150	15160	25791;25792;25793	25793					0.0935948011056098
KNKNMFTLLI	10	Unmodified	_KNKNMFTLLI_					0	0	0			REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3549194335938	2	611.354834	1220.69511	1.1383	0.00069592	0.67847	0.00041479	1.8168	0.0011107	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.86348	1	9503	9503		31.53	0	1	7316900	+		22446	15516	15150	15160	25794	25794					0.0935948011056098
KNKNMFTLLI	10	Unmodified	_KNKNMFTLLI_					0	0	0			REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3557739257812	2	611.354834	1220.69511	1.142	0.00069816	1.5785	0.00096504	2.7205	0.0016632	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.86471	1	9790	9790		30.318	0	1	17478000	+		22447	15516	15150	15160	25795	25795					0.0935948011056098
KNKNMFTLLI	10	Unmodified	_KNKNMFTLLI_					0	0	0			REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3549194335938	2	611.354834	1220.69511	0.8676	0.00053041	1.8536	0.0011332	2.7212	0.0016636	611.3560720152175	95.924	5.0581	96.087	95.071	100.13	0.16317					363	118	6	0	0	0	0.80179	3	9741	9741;9823;9835		39.253	4.9991	1	16539000	+		22448	15516	15150	15160	25796;25797;25798	25796					0.0935948011056098
KNKNMFTLLI	10	Unmodified	_KNKNMFTLLI_					0	0	0			REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	REV__nc|ENSG00000187848|Q9UBL9-7|P2RX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3558349609375	2	611.354834	1220.69511	-1.2523	-0.00076562	3.9822	0.0024345	2.7298	0.0016689	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.82886	1	9776	9776		37.812	3.8899	1	16503000	+		22449	15516	15150	15160	25799	25799					0.0935948011056098
KNKNPLTP	8	Unmodified	_KNKNPLTP_					0	0	0			REV__ENST00000395611.7_3_10:49643604-49643799:+|nuORF	REV__ENST00000395611.7_3_10:49643604-49643799:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.2692565917969	2	456.269084	910.523616	-1.2298	-0.00056112	1.3658	0.00062319	0.13603	6.2066E-05	456.26955386041453	27.778	1.0533	27.681	27.36	28.413	-0.096945					55	24	3	0	0	0	0.79403	1	1656	1656		63.306	2.3343	1	414790	+		22450	26116	15151	15161	25800	25800					0.06477491134353386
KNKNVRDSA	9	Unmodified	_KNKNVRDSA_					0	0	0		ENST00000374279.3_1_9:114696562-114696673:+|nuORF	ENST00000374279.3_1_9:114696562-114696673:+|nuORF	ENST00000374279.3_1_9:114696562-114696673:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.31396484375	2	516.283254	1030.55196	0.80362	0.0004149	-2.1926	-0.001132	-1.389	-0.00071712	516.2817045340587	99.139	0.65724	99.296	98.859	99.516	0.15659					29	15	3	0	0	0	0.20789	1	10291	10291		39.253	17.293	1	376950			22451	10774	15152	15162	25801	25801					0.03790189043661485
KNKPAVPK	8	Unmodified	_KNKPAVPK_					0	0	0		nc|ENSG00000132872|Q9H2B2-2|SYT4;ENSG00000132872|ENST00000255224|SYT4	nc|ENSG00000132872|Q9H2B2-2|SYT4	nc|ENSG00000132872|Q9H2B2-2|SYT4	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.281005859375	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.641	1	40.641	40.141	41.141	0								0	0	0	0.29568	1	2689	2689		35.201	12.158	1				22452	3836	15153	15163	25802	25802					0.10438385376653514
KNKPRFGNHPQ	11	Unmodified	_KNKPRFGNHPQ_					0	0	0			REV__nc|ENSG00000196141|Q9NUQ6-3|SPATS2L	REV__nc|ENSG00000196141|Q9NUQ6-3|SPATS2L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.8072814941406	3	441.57406	1321.70035	0.2616	0.00011551	-0.23568	-0.00010407	0.025917	1.1444E-05	441.57392702419395	19.703	0.51731	19.234	18.974	19.491	-0.46967					30	10	4	0	0	0	0.17243	1	520	520		12.433	0	1	125890	+		22453	30122	15154	15164	25803	25803					0.05236920017364355
KNKPSKSNK	9	Unmodified	_KNKPSKSNK_					0	0	0		nc|ENSG00000164190|Q6KC79-2|NIPBL;ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-3|NIPBL	nc|ENSG00000164190|Q6KC79-2|NIPBL	nc|ENSG00000164190|Q6KC79-2|NIPBL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8041381835938	2	515.803823	1029.59309	0.99159	0.00051147	-1.0995	-0.00056714	-0.10793	-5.5671E-05	515.8030952914191	22.982	0.88607	22.563	22.23	23.116	-0.41879					49	20	4	0	0	0	0.17181	1	994	994		79.713	2.9384	1	541750			22454	5936	15155	15165	25804	25804					0.07947950083121214
KNKQKSKN	8	Unmodified	_KNKQKSKN_					0	0	0		ENST00000558522.5_1_15:79165359-79183469:+|nuORF	ENST00000558522.5_1_15:79165359-79183469:+|nuORF	ENST00000558522.5_1_15:79165359-79183469:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79083251953125	2	487.790715	973.566878	0.84663	0.00041298	-1.0594	-0.00051676	-0.21277	-0.00010379	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.85277	1	8723	8723		25.45	0	1	2238600			22455	13789	15156	15166	25805	25805					0.07903680911658739
KNKRIMHRIS	10	Unmodified	_KNKRIMHRIS_					0	0	0			REV__ENSG00000108107|ENST00000344063|RPL28	REV__ENSG00000108107|ENST00000344063|RPL28	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8827514648438	2	641.879873	1281.74519	-0.046993	-3.0164E-05	4.1398	0.0026572	4.0928	0.0026271	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.8651	1	9926	9926		25.574	1.0549	1	2217900	+		22456	17696	15157	15167	25806	25806					0.11559027559064816
KNKRKQYKT	9	Unmodified	_KNKRKQYKT_					0	0	0			REV__nc|ENSG00000196535|Q92614-2|MYO18A	REV__nc|ENSG00000196535|Q92614-2|MYO18A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.361083984375	2	597.359296	1192.70404	0.94282	0.0005632	-2.9089	-0.0017377	-1.9661	-0.0011744	597.3571269689473	100.1	2.8225	100.31	99.04	101.86	0.21512					167	67	4	0	0	0	0.7932	1	10529	10529		21.96	0	1	2588300	+		22457	23141	15158	15168	25807	25807					0.11539589791209437
KNKRKRYRKKI	11	Unmodified	_KNKRKRYRKKI_					0	0	0			REV__ENSG00000055609|ENST00000262189|KMT2C	REV__ENSG00000055609|ENST00000262189|KMT2C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3085021972656	3	506.666954	1516.97903	0.47425	0.00024028	-2.9603	-0.0014999	-2.486	-0.0012596	507.0000271561649	63.655	0.14455	63.778	63.685	63.83	0.12252					7	5	2	0	0	0	0.18238	1	5588	5588		13.508	7.5069	1	28948	+		22458	16413	15159	15169	25808	25808					0.2412224699003218
KNKSTHLKKP	10	Unmodified	_KNKSTHLKKP_					0	0	0		nc|ENSG00000138311|Q70YC4|ZNF365	nc|ENSG00000138311|Q70YC4|ZNF365	nc|ENSG00000138311|Q70YC4|ZNF365	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8670654296875	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.86218	1	11538	11538		32.812	3.6629	1	52150000			22459	14952	15160	15170	25809	25809					0.12612473933995716
KNKSYIVYM	9	Unmodified	_KNKSYIVYM_					0	0	0			REV__ENSG00000153404|ENST00000637938|PLEKHG4B	REV__ENSG00000153404|ENST00000637938|PLEKHG4B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.8167724609375	2	573.30481	1144.59507	0.24004	0.00013761	-3.394	-0.0019458	-3.1539	-0.0018082	573.3027529973439	35.21	0.80722	35.457	34.976	35.783	0.24769					35	20	2	0	0	0	0.20789	1	2704	2704		42.396	14.315	1	451910	+		22460	20348	15161	15171	25810	25810					0.028552427767181143
KNKTAIIFP	9	Unmodified	_KNKTAIIFP_					0	0	0			REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|169|3|sense	REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|169|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3139038085938	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.7724	-0.0014314	-4.3342	-0.0022378	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.64922	1	10479	10479		44.117	1.7207	1	66055000	+		22461	29619	15162	15172	25811	25811					0.1034321023666962
KNKTAIIFP	9	Unmodified	_KNKTAIIFP_					0	0	0			REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|169|3|sense	REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|169|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3141479492188	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12835	12835		24.203	6.8378	1	4038100	+		22462	29619	15162	15172	25812	25812					0.1034321023666962
KNKTGPLG	8	Unmodified	_KNKTGPLG_					0	0	0			REV__nc|ENSG00000132950|Q9UJ78-1|ZMYM5	REV__nc|ENSG00000132950|Q9UJ78-1|ZMYM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.2460021972656	2	407.742702	813.470852	-1.932	-0.00078778	-0.61922	-0.00025248	-2.5513	-0.0010403	407.7423235340561	24.055	0.64054	24.114	23.832	24.473	0.058167					43	28	2	0	0	0	0.86288	1	799	799		26.796	0	1	59911	+		22463	29849	15163	15173	25813	25813					0.05665533071567097
KNKTLVTQN	9	Unmodified	_KNKTLVTQN_					0	0	0		ENSG00000173801|ENST00000393931|JUP	ENSG00000173801|ENST00000393931|JUP	ENSG00000173801|ENST00000393931|JUP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3037719726562	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.78528	1	9089	9089		29.17	1.2878	1	13442000			22464	6886	15164	15174	25814	25814					0.07224530363305348
KNKVGSQLRS	10	Unmodified	_KNKVGSQLRS_					0	0	0		nc|ENSG00000162692|P19320-2|VCAM1;nc|ENSG00000162692|P19320-3|VCAM1;ENSG00000162692|ENST00000294728|VCAM1	nc|ENSG00000162692|P19320-2|VCAM1	nc|ENSG00000162692|P19320-2|VCAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.828125	2	558.827829	1115.64111	0.54226	0.00030303	-1.0447	-0.00058381	-0.50244	-0.00028078	558.8270788405256	65.54	0.60555	65.665	65.338	65.944	0.12532					65	32	3	0	0	0	0.86446	1	5825	5825		30.569	0.72732	1	2467400			22465	5718	15165	15175	25815	25815					0.087910240031988
KNKVKGNPHTV	11	Unmodified	_KNKVKGNPHTV_					0	0	0		ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3547973632812	2	611.356754	1220.69895	2.1766	0.0013307	-3.4744	-0.0021241	-1.2977	-0.00079338	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.68532	1	9900	9900		33.922	1.1092	1	5823000			22466	8055	15166	15176	25816	25816					0.09743285928584555
KNKVKPQVRL	10	Unmodified	_KNKVKPQVRL_					0	0	0			REV__ENST00000505625.5_1_5:138658345-138658489:+|nuORF	REV__ENST00000505625.5_1_5:138658345-138658489:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.2647705078125	3	403.931185	1208.77173	0.25098	0.00010138	-4.1453	-0.0016744	-3.8943	-0.001573	403.92942319004646	47.073	4.6899	47.112	45.811	50.501	0.038181					268	130	4	0	0	0	0.85958	1	3574	3574		10.587	0	1	2178500	+		22467	27885	15167	15177	25817	25817					0.1756903972204782
KNKVTYILP	9	Unmodified	_KNKVTYILP_					0	0	0			REV__nc|ENSG00000260811|A6NMZ5|OR4C45	REV__nc|ENSG00000260811|A6NMZ5|OR4C45	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3272094726562	2	538.329142	1074.64373	-1.5288	-0.000823	-2.6998	-0.0014534	-4.2286	-0.0022764	538.3277485689301	39.382	1.0123	39.75	39.687	40.699	0.36797					32	24	2	0	0	0	0.78536	1	3297	3297		29.15	0	1	1031200	+		22468	30251	15168	15178	25818	25818					0.10939479408125408
KNKYAPAPI	9	Unmodified	_KNKYAPAPI_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2919006347656	2	501.292559	1000.57057	0.16565	8.304E-05	-4.0766	-0.0020436	-3.911	-0.0019605	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.78058	1	9872	9872		30.504	4.9296	1	2717900	+		22469	18645	15169	15179	25819	25819					0.07030350685499798
KNKYLLFSQ	9	Unmodified	_KNKYLLFSQ_					0	0	0			REV__ENSG00000163827|ENST00000395905|LRRC2	REV__ENSG00000163827|ENST00000395905|LRRC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.8244018554688	2	570.824224	1139.63389	0.16054	9.164E-05	0.12067	6.8882E-05	0.28121	0.00016052	570.8240970044897	61.664	0.90487	61.631	61.356	62.261	-0.033173					76	36	3	0	0	0	0.76764	1	5818	5818		34.173	2.2177	1	637440	+		22470	20982	15170	15180	25820	25820					0.06966291402750358
KNLCIFSVKGI	11	Unmodified	_KNLCIFSVKGI_					0	0	0		ENST00000453977.2_1_X:24700103-24700596:+|nuORF	ENST00000453977.2_1_X:24700103-24700596:+|nuORF	ENST00000453977.2_1_X:24700103-24700596:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3549194335938	2	611.354834	1220.69511	-0.40518	-0.00024771	2.2197	0.001357	1.8145	0.0011093	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.7144	1	9707	9707		29.17	2.4771	1	5373200			22471	11937	15171	15181	25821	25821					0.09359480110538243
KNLDKLIRLV	10	Unmodified	_KNLDKLIRLV_					0	0	0		ENSG00000104774|ENST00000456935|MAN2B1;ENST00000466794.5_1_19:12769146-12777470:-|nuORF;nc|ENSG00000104774|O00754-2|MAN2B1;ENST00000462144.1_1_19:12771887-12774226:-|nuORF	ENSG00000104774|ENST00000456935|MAN2B1	ENSG00000104774|ENST00000456935|MAN2B1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.929931640625	3	404.599324	1210.77614	0.051585	2.0871E-05	-2.2578	-0.00091352	-2.2062	-0.00089265	404.5984124465417	47.21	1.8332	47.201	45.981	47.814	-0.0093231					70	51	2	0	0	0	0.37624	1	3860	3860		30.569	12.038	1	486380			22472	2147	15172	15182	25822	25822					0.17918504144927283
KNLEKYKGKFV	11	Unmodified	_KNLEKYKGKFV_					0	0	0			REV__ENSG00000196189|ENST00000368285|SEMA4A	REV__ENSG00000196189|ENST00000368285|SEMA4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9327087402344	3	451.934484	1352.78162	-1.2127	-0.00054806	-2.8312	-0.0012795	-4.0439	-0.0018276	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.72374	1	10260	10260		27.644	0.89421	1	518100	+		22473	23102	15173	15183	25823	25823					0.11934182936715843
KNLEKYKGKFV	11	Unmodified	_KNLEKYKGKFV_					0	0	0			REV__ENSG00000196189|ENST00000368285|SEMA4A	REV__ENSG00000196189|ENST00000368285|SEMA4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9333801269531	3	451.934484	1352.78162	-1.7713	-0.0008005	-2.1778	-0.00098423	-3.9491	-0.0017847	451.93340802352935	100.57	2.3737	100.74	99.884	102.26	0.17199					164	56	4	0	0	0	0.74022	1	10401	10401		24.232	7.0651	1	618930	+		22474	23102	15173	15183	25824	25824					0.11934182936715843
KNLFLWLFL	9	Unmodified	_KNLFLWLFL_					0	0	0			REV__ENST00000567780.1_1_12:54377735-54378077:-|nuORF	REV__ENST00000567780.1_1_12:54377735-54378077:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.3579711914062	2	597.357702	1192.70085	-0.24184	-0.00014447	0.9447	0.00056433	0.70286	0.00041986	597.3578636523395	100.56	3.0718	100.56	99.06	102.13	0					172	73	4	0	0	0	0.72402	1	10216	10216		38.806	3.6541	1	2923800	+		22475	28886	15174	15184	25825	25825					0.11220946684488808
KNLFRLEMDM	10	Unmodified	_KNLFRLEMDM_					0	0	0		nc|ENSG00000139597|Q5TBK1-2|N4BP2L1	nc|ENSG00000139597|Q5TBK1-2|N4BP2L1	nc|ENSG00000139597|Q5TBK1-2|N4BP2L1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5976867675781	3	432.886148	1295.63661	2.7169	0.0011761	-3.4125	-0.0014772	-0.69565	-0.00030114	432.88464698491026	106.31	1.8665	106.27	105.9	107.76	-0.03714					59	43	2	0	0	0	0.37624	1	11949	11949		31.634	0	1	183210			22476	14959	15175	15185	25826	25826					0.0006205547374520393
KNLFSKLVSA	10	Unmodified	_KNLFSKLVSA_					0	0	0			REV__ENSG00000163558|ENST00000295797|PRKCI	REV__ENSG00000163558|ENST00000295797|PRKCI	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.830078125	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.8651	1	9202	9202		25.574	1.0549	1	5219600	+		22477	20934	15176	15186	25827	25827					0.10094577919812764
KNLFSKLVSA	10	Unmodified	_KNLFSKLVSA_					0	0	0			REV__ENSG00000163558|ENST00000295797|PRKCI	REV__ENSG00000163558|ENST00000295797|PRKCI	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8299560546875	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.86272	1	8848	8848		24.519	0.31644	1	2008100	+		22478	20934	15176	15186	25828	25828					0.10094577919812764
KNLFSKLVSA	10	Unmodified	_KNLFSKLVSA_					0	0	0			REV__ENSG00000163558|ENST00000295797|PRKCI	REV__ENSG00000163558|ENST00000295797|PRKCI	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8297729492188	2	553.832049	1105.64954	0.37109	0.00020552	-3.8764	-0.0021469	-3.5053	-0.0019414	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.8651	1	10444	10444		25.574	1.0549	1	1786500	+		22479	20934	15176	15186	25829	25829					0.10094577919812764
KNLGGVTQ	8	Unmodified	_KNLGGVTQ_					0	0	0		ENSG00000112312|ENST00000230056|GMNN	ENSG00000112312|ENST00000230056|GMNN	ENSG00000112312|ENST00000230056|GMNN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.7415466308594	2	408.732335	815.450116	2.5176	0.001029	3.3772	0.0013804	5.8948	0.0024094	408.7341299143561	25.537	0.46546	25.106	24.806	25.272	-0.4311					14	10	2	0	0	0	0.4196	1	1329	1329		18.324	4.5491	1	21669			22480	2655	15177	15187	25830	25830					0.03500942691891851
KNLGTIAKSGT	11	Unmodified	_KNLGTIAKSGT_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF	ENSG00000166598|ENST00000299767|HSP90B1	ENSG00000166598|ENST00000299767|HSP90B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3170776367188	2	545.316763	1088.61897	-0.68757	-0.00037494	0.63783	0.00034782	-0.049742	-2.7125E-05	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.69931	1	8605	8605		31.634	1.1306	1	3608000			22481	6216	15178	15188	25831	25831					0.07820799534783873
KNLGTIAKSGT	11	Unmodified	_KNLGTIAKSGT_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF	ENSG00000166598|ENST00000299767|HSP90B1	ENSG00000166598|ENST00000299767|HSP90B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3170166015625	2	545.316763	1088.61897	-0.0069207	-3.774E-06	0.033442	1.8237E-05	0.026521	1.4463E-05	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.68532	1	10341	10341		33.922	1.1092	1	4868200			22482	6216	15178	15188	25832	25832					0.07820799534783873
KNLISRIHDSP	11	Unmodified	_KNLISRIHDSP_					0	0	0		ENST00000472828.1_1_2:179695251-179701862:-|nuORF	ENST00000472828.1_1_2:179695251-179701862:-|nuORF	ENST00000472828.1_1_2:179695251-179701862:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3590698242188	2	640.359493	1278.70443	1.6035	0.0010268	-2.5816	-0.0016532	-0.97817	-0.00062638	640.3577368030512	99.407	2.6879	99.454	98.409	101.1	0.047531					162	62	4	0	0	0	0.61369	1	10662	10662		42.864	6.4175	1	584870			22483	12270	15179	15189	25833	25833					0.07622964720417258
KNLKALYVV	9	Unmodified	_KNLKALYVV_					0	0	0		nc|ENSG00000241484|P85298-2|ARHGAP8;nc|ENSG00000241484|P85298-5|ARHGAP8;ENST00000460809.5_1_22:45182338-45244945:+|nuORF;ENSG00000241484|ENST00000356099|ARHGAP8;nc|ENSG00000241484|P85298-3|ARHGAP8;nc|ENSG00000241484|P85298|ARHGAP8	nc|ENSG00000241484|P85298-2|ARHGAP8	nc|ENSG00000241484|P85298-2|ARHGAP8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2772827148438	2	524.331685	1046.64882	0.79926	0.00041908	-0.80801	-0.00042367	-0.0087482	-4.587E-06	524.8310634231967	25.642	0.16334	25.385	25.261	25.424	-0.2572					5	3	2	0	0	0	0.20789	1	1324	1324		30.504	0	1	54448			22484	8793	15180	15190	25834	25834					0.12735783270727552
KNLKTSYAP	9	Unmodified	_KNLKTSYAP_					0	0	0			REV__ENSG00000165185|ENST00000337530|KIAA1958	REV__ENSG00000165185|ENST00000337530|KIAA1958	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.28570556640625	2	511.287474	1020.5604	0.062378	3.1893E-05	-1.1131	-0.00056911	-1.0507	-0.00053722	511.28662483602045	41.834	0.71769	41.788	41.434	42.152	-0.045467					37	17	3	0	0	0	0.55097	1	2784	2784		49.442	0	1	644920	+		22485	21159	15181	15191	25835	25835					0.05093742960275449
KNLKVKGPTLR	11	Unmodified	_KNLKVKGPTLR_					0	0	0		chr8:56073272-56073713|18|18.61|0.21|6.47|-|0|RPS20,None|1	chr8:56073272-56073713|18|18.61|0.21|6.47|-|0|RPS20,None|1	chr8:56073272-56073713|18|18.61|0.21|6.47|-|0|RPS20,None|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.60479736328125	3	418.60659	1252.79794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.849	1	49.825	49.325	50.325	-0.024033								0	0	0	0.56276	1	4288	4288		22.562	0	1				22486	521	15182	15192	25836	25836					0.18165308893503607
KNLLGLQNIPR	11	Unmodified	_KNLLGLQNIPR_					0	0	0		ENSG00000181045|ENST00000361193|SLC26A11	ENSG00000181045|ENST00000361193|SLC26A11	ENSG00000181045|ENST00000361193|SLC26A11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5930480957031	3	422.594461	1264.76155	-0.81678	-0.00034517	-3.5347	-0.0014938	-4.3515	-0.0018389	422.59284282323074	58.274	1.5988	58.267	57.538	59.137	-0.0074387					138	72	3	0	0	0	0.75121	1	4928	4928		21.78	3.2494	1	237230			22487	7370	15183	15193	25837	25837					0.13976431996775318
KNLLNSIEM	9	Oxidation (M)	_KNLLNSIEM(Oxidation (M))_		KNLLNSIEM(1)		KNLLNSIEM(44)	0	0	1			REV__ENSG00000107957|ENST00000369774|SH3PXD2A	REV__ENSG00000107957|ENST00000369774|SH3PXD2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	539.2799682617188	2	539.284074	1076.5536	-0.90123	-0.00048602	-2.0817	-0.0011227	-2.983	-0.0016087	539.2827714526277	76.319	0.78116	76.319	75.958	76.739	0					54	28	3	0	0	0	0.64555	1	6967	6967		44.377	7.2181	1	191520	+		22488	17685	15184	15194	25838	25838		255			0.01838062017395714
KNLNLLKTY	9	Unmodified	_KNLNLLKTY_					0	0	0			REV__L1MC1_dup5266|chr6:80042944-80044043:-|1.7108556766587488|0.133159998821808|3.68|63.0|13|2|sense	REV__L1MC1_dup5266|chr6:80042944-80044043:-|1.7108556766587488|0.133159998821808|3.68|63.0|13|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8302612304688	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.7932	1	8995	8995		24.203	0.68005	1	3935500	+		22489	29529	15185	15195	25839	25839					0.10094577919812764
KNLQFKLLQT	10	Unmodified	_KNLQFKLLQT_					0	0	0			REV__nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10	REV__nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.5838623046875	3	411.583562	1231.72886	2.5249	0.0010392	-1.0548	-0.00043412	1.4701	0.00060507	411.5831450688618	25.588	2.9561	25.157	24.499	27.455	-0.4311					162	67	5	0	0	0	0.86647	1	1381	1381		28.577	6.0151	1	1542200	+		22490	30238	15186	15196	25840	25840					0.12226224873938918
KNLQLGVGRSK	11	Unmodified	_KNLQLGVGRSK_					0	0	0		ENSG00000175471|ENST00000515393|MCTP1	ENSG00000175471|ENST00000515393|MCTP1	ENSG00000175471|ENST00000515393|MCTP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.580322265625	3	400.578811	1198.7146	5.5428	0.0022203	-1.2854	-0.00051489	4.2574	0.0017054	400.57819432887953	111.82	0.52379	111.85	111.7	112.22	0.032707					48	18	4	0	0	0	0.72892	1	13577	13577		26.75	1.6237	1	3019100			22491	7019	15187	15197	25841	25841					0.12319572445653648
KNLQLNQTK	9	Unmodified	_KNLQLNQTK_					0	0	0			REV__nc|ENSG00000166153|Q8N2C3|DEPDC4	REV__nc|ENSG00000166153|Q8N2C3|DEPDC4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.805419921875	2	543.81693	1085.61931	0.88782	0.00048281	-0.6941	-0.00037746	0.19372	0.00010535	543.8164815474648	25.135	0.43325	25.098	24.838	25.272	-0.037178					16	9	2	0	0	0	0.20789	1	968	968		9.7057	6.5464	1	33509	+		22492	21258	15188	15198	25842	25842					0.07992219254606425
KNLRHKRLSN	10	Unmodified	_KNLRHKRLSN_					0	0	0		ENST00000474780.1_1_3:19987557-19988503:-|nuORF	ENST00000474780.1_1_3:19987557-19988503:-|nuORF	ENST00000474780.1_1_3:19987557-19988503:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7513427734375	3	422.589822	1264.74764	2.1055	0.00088976	4.2527	0.0017971	6.3582	0.0026869	422.59160901890226	75.855	0.64697	75.902	75.675	76.322	0.04644					19	17	2	0	0	0	0.37624	1	7422	7422		18.531	4.8015	1	27005			22493	12309	15189	15199	25843	25843					0.12585199288355398
KNLRPVRLLT	10	Unmodified	_KNLRPVRLLT_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9301452636719	3	403.931185	1208.77173	-1.8895	-0.00076324	-2.2243	-0.00089846	-4.1138	-0.0016617	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.85441	1	3573	3573		20.837	4.1198	1	2300300	+		22494	16914	15190	15200	25844	25844					0.17569039722025082
KNLRQLLRKSQ	11	Unmodified	_KNLRQLLRKSQ_					0	0	0		ENSG00000157578|ENST00000288350|LCA5L	ENSG00000157578|ENST00000288350|LCA5L	ENSG00000157578|ENST00000288350|LCA5L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.5770263671875	3	461.956282	1382.84702	-1.4658	-0.00067716	1.298	0.0005996	-0.16788	-7.7553E-05	461.9567974252119	30.153	0.61822	30.182	29.876	30.495	0.028618					35	13	4	0	0	0	0.17835	1	1954	1954		8.0344	0	1	188450			22495	5439	15191	15201	25845	25845					0.17090597182436795
KNLRSHGITII	11	Unmodified	_KNLRSHGITII_					0	0	0			REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.92242431640625	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.75921	1	11512	11512		23.378	4.1152	1	19495000	+		22496	27703	15192	15202	25846	25846					0.13056145479754377
KNLRSHGITII	11	Unmodified	_KNLRSHGITII_					0	0	0			REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3795166015625	2	626.380229	1250.7459	2.9096	0.0018225	-3.8515	-0.0024125	-0.94186	-0.00058996	626.377711482176	105.86	2.6957	105.82	104.89	107.59	-0.03714					304	63	6	0	0	0	0.67762	1	11866	11866		40.778	6.6056	1	48616000	+		22497	27703	15192	15202	25847	25847					0.13056145479754377
KNLRSHGITII	11	Unmodified	_KNLRSHGITII_					0	0	0			REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.8807983398438	2	626.380229	1250.7459	2.9114	0.0018237	-2.1698	-0.0013591	0.74162	0.00046454	626.3789104514062	116.12	0.91767	116.1	115.83	116.75	-0.02433					47	26	2	0	0	0	0.68378	1	12868	12868		34.173	6.2903	1	135240	+		22498	27703	15192	15202	25848	25848					0.13056145479754377
KNLRSHGITII	11	Unmodified	_KNLRSHGITII_					0	0	0			REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.380859375	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.08	1	115.03	114.53	115.53	-0.05722								0	0	0	0.56276	1	12326	12326		19.997	1.7347	1		+		22499	27703	15192	15202	25849	25849					0.13056145479754377
KNLRSHGITII	11	Unmodified	_KNLRSHGITII_					0	0	0			REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	REV__ENST00000493851.5_1_3:39143979-39149053:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3809814453125	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.79	1	119.71	119.21	120.21	-0.088509								0	0	0	0.56276	1	12944	12944		19.104	0	1		+		22500	27703	15192	15202	25850	25850					0.13056145479754377
KNLRVAEA	8	Unmodified	_KNLRVAEA_					0	0	0		ENSG00000019485|ENST00000683152|PRDM11	ENSG00000019485|ENST00000683152|PRDM11	ENSG00000019485|ENST00000683152|PRDM11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7503662109375	2	450.766709	899.518865	-0.1148	-5.1747E-05	-0.14025	-6.3222E-05	-0.25505	-0.00011497	450.7662408432886	34.107	0.41702	34.11	33.872	34.289	0.0026016					13	8	2	0	0	0	0.4196	1	2034	2034		25.45	1.2474	1	20610			22501	838	15193	15203	25851	25851					0.06508606991599208
KNLWKKQGY	9	Unmodified	_KNLWKKQGY_					0	0	0			REV__nc|ENSG00000016402|Q9UHF4-3|IL20RA	REV__nc|ENSG00000016402|Q9UHF4-3|IL20RA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.833251953125	2	582.82984	1163.64513	0.8279	0.00048252	4.0976	0.0023882	4.9254	0.0028707	582.8322150120989	94.225	3.555	94.386	93.365	96.92	0.16119					184	84	3	0	0	0	0.7932	1	9651	9651		24.203	2.2429	1	780120	+		22502	16215	15194	15204	25852	25852					0.0698511349689852
KNLYAIENR	9	Unmodified	_KNLYAIENR_					0	0	0			REV__nc|ENSG00000112742|P33981-2|TTK	REV__nc|ENSG00000112742|P33981-2|TTK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8087768554688	2	560.809105	1119.60366	0.54768	0.00030714	-0.38928	-0.00021831	0.1584	8.883E-05	560.8087603082379	31.413	0.94127	31.505	31.19	32.131	0.092003					46	21	4	0	0	0	0.51592	1	2164	2164		51.193	3.5354	1	1176700	+		22503	15893	15195	15205	25853	25853					0.04863932737544019
KNMLSDKDP	9	Unmodified	_KNMLSDKDP_					0	0	0		ENSG00000118482|ENST00000262043|PHF3	ENSG00000118482|ENST00000262043|PHF3	ENSG00000118482|ENST00000262043|PHF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2772827148438	2	524.260599	1046.50665	0.81312	0.00042629	2.472	0.001296	3.2852	0.0017223	524.2613500020744	25.62	0.33665	25.363	25.087	25.424	-0.2572					12	7	2	0	0	0	0.20789	1	1324	1324		31.53	0	1	99722			22504	3031	15196	15206	25854	25854					-0.014747975337513708
KNMTHLSQLQI	11	Unmodified	_KNMTHLSQLQI_					0	0	0			REV__ENST00000395719.7_1_4:76568310-76568457:-|nuORF	REV__ENST00000395719.7_1_4:76568310-76568457:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.24017333984375	3	438.239578	1311.69691	-1.2709	-0.00055695	1.9174	0.00084028	0.64653	0.00028333	438.2402874427309	72.883	0.77341	73.269	72.917	73.69	0.38581					52	18	4	0	0	0	0.6593	1	8143	8143		37.6	1.2823	1	1069800	+		22505	26120	15197	15207	25855	25855					0.05352489128495108
KNNAEILVIL	10	Unmodified	_KNNAEILVIL_					0	0	0		ENST00000467551.1_1_1:151065823-151090440:+|nuORF;ENSG00000143458|ENST00000368918|GABPB2	ENST00000467551.1_1_1:151065823-151090440:+|nuORF	ENST00000467551.1_1_1:151065823-151090440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.3255615234375	2	563.845156	1125.67576	0.33759	0.00019035	0.35152	0.0001982	0.6891	0.00038855	563.8481218362832	58.811	0.1634	59.364	59.257	59.421	0.55323					5	3	2	0	0	0	0.37624	1	6186	6186		17.365	0	1	174790			22506	4633	15198	15208	25856	25856					0.11794847091277916
KNNESEPVKL	10	Unmodified	_KNNESEPVKL_					0	0	0			REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	579.313232421875	2	579.311677	1156.6088	0.046949	2.7198E-05	0.047184	2.7334E-05	0.094134	5.4533E-05	579.3118617476703	28.702	0.64075	28.529	28.249	28.89	-0.17336					25	15	2	0	0	0	0.3985	1	1762	1762		64.207	0.67341	1	238610	+		22507	20380	15199	15209	25857	25857					0.03676191809518059
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3935546875	2	648.393336	1294.77212	0.024154	1.5661E-05	-0.60517	-0.00039239	-0.58101	-0.00037672	648.3928433509174	107.73	1.0319	107.73	106.84	107.87	0					93	24	4	0	0	0	0.65746	1	11215	11215		37.812	7.4938	1	35129000			22508	8534	15200	15210	25858	25858					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3923950195312	2	648.393336	1294.77212	-0.0023386	-1.5163E-06	-0.87161	-0.00056515	-0.87395	-0.00056666	648.3926215212863	106.57	0.85555	106.54	106.01	106.87	-0.025146					71	19	4	0	0	0	0.67778	2	11589	11589;11601		35.152	7.0705	1	19156000			22509	8534	15200	15210	25859;25860	25859					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.392822265625	2	648.393336	1294.77212	-0.0023386	-1.5163E-06	-0.71325	-0.00046246	-0.71559	-0.00046398	648.3927201405174	107.38	1.0747	107.34	106.86	107.93	-0.034409					97	25	4	0	0	0	0.638	3	11625	11625;11649;11721		40.058	5.982	1	36844000			22510	8534	15200	15210	25861;25862;25863	25861					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.5977783203125	3	432.597983	1294.77212	-0.16983	-7.3466E-05	0.49269	0.00021314	0.32286	0.00013967	432.59814834944257	107.38	0.9445	107.34	106.95	107.89	-0.034409					44	22	2	0	0	0	0.72739	1	11650	11650		24.276	0	1	14888000			22511	8534	15200	15210	25864	25864					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.392578125	2	648.393336	1294.77212	2.6473	0.0017165	-3.5685	-0.0023138	-0.92115	-0.00059727	648.3908884221966	106.46	0.85558	106.43	105.94	106.79	-0.034134					69	19	4	0	0	0	0.70584	1	11748	11748		30.569	2.4874	1	16306000			22512	8534	15200	15210	25865	25865					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3927001953125	2	648.393336	1294.77212	2.6473	0.0017165	-3.3608	-0.0021791	-0.7135	-0.00046263	648.3910621231973	107.28	1.1649	107.25	106.75	107.91	-0.034134					106	27	4	0	0	0	0.65746	7	11828	11828;11840;11852;11877;11901;11924;11960		37.812	8.6415	1	42480000			22513	8534	15200	15210	25866;25867;25868;25869;25870;25871;25872	25866					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.39599609375	2	648.393336	1294.77212	2.6469	0.0017162	-4.1667	-0.0027016	-1.5198	-0.00098544	648.3901910021385	117.47	0.65495	117.44	117.25	117.9	-0.024338					33	21	2	0	0	0	0.77421	1	13024	13024		16.717	2.5803	1	58589			22514	8534	15200	15210	25873	25873					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.59771728515625	3	432.597983	1294.77212	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.08	1	107.05	106.55	107.55	-0.034134								0	0	0	0.56276	1	11853	11853		25.068	13.613	1				22515	8534	15200	15210	25874	25874					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3923950195312	2	648.393336	1294.77212	1.8787	0.0012181	-2.6701	-0.0017313	-0.7914	-0.00051314	648.3914694260502	106.27	0.88895	106.3	105.79	106.67	0.03688					67	20	4	0	0	0	0.59499	3	11664	11605;11627;11664		45.022	6.1365	1	16251000			22516	8534	15200	15210	25875;25876;25877	25877					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5976257324219	3	432.597983	1294.77212	2.4108	0.0010429	-2.4605	-0.0010644	-0.04966	-2.1483E-05	432.5968710757986	107.1	1.2973	107.13	106.67	107.97	0.035622					60	30	2	0	0	0	0.75544	1	11687	11687		18.966	0	1	18390000			22517	8534	15200	15210	25878	25878					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3926391601562	2	648.393336	1294.77212	1.8787	0.0012181	-2.609	-0.0016917	-0.73035	-0.00047355	648.3915145457087	107.1	1.2973	107.13	106.67	107.97	0.035622					111	30	4	0	0	0	0.62614	2	11711	11688;11711		41.427	7.505	1	42934000			22518	8534	15200	15210	25879;25880	25880					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3927612304688	2	648.393336	1294.77212	1.6039	0.00104	-2.3204	-0.0015045	-0.71644	-0.00046454	648.3917432358439	106.08	2.1363	106.23	104.51	106.65	0.14843					114	53	4	0	0	0	0.66929	1	11400	11400		36.447	7.2767	1	52760000			22519	8534	15200	15210	25881	25881					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.392822265625	2	648.393336	1294.77212	1.6039	0.00104	-2.236	-0.0014498	-0.63213	-0.00040987	648.3917676742469	106.97	1.0935	107.11	106.64	107.73	0.13866					101	26	4	0	0	0	0.638	3	11557	11412;11424;11557		40.058	7.3076	1	58516000			22520	8534	15200	15210	25882;25883;25884	25884					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.59783935546875	3	432.597983	1294.77212	-1.5737	-0.00068079	1.9561	0.00084622	0.3824	0.00016543	432.59875141375613	106.97	1.3878	107.11	106.64	108.03	0.13866					68	34	2	0	0	0	0.732	1	11534	11534		23.514	1.7339	1	21235000			22521	8534	15200	15210	25885	25885					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3925170898438	2	648.393336	1294.77212	1.6038	0.0010399	-3.2535	-0.0021096	-1.6497	-0.0010697	648.3911787840404	107.84	0.37682	107.98	107.69	108.07	0.13866					32	9	4	0	0	0	0.62614	1	11581	11581		41.427	6.2746	1	42909000			22522	8534	15200	15210	25886	25886					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59783935546875	3	432.597983	1294.77212	0.73482	0.00031788	-1.4599	-0.00063157	-0.72512	-0.00031369	432.59735068529625	106.11	1.1677	106.21	105.57	106.74	0.099007					121	28	6	0	0	0	0.72106	1	11338	11338		19.627	0	1	31122000			22523	8534	15200	15210	25887	25887					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.392333984375	2	648.393336	1294.77212	0.94474	0.00061257	-1.779	-0.0011535	-0.83426	-0.00054093	648.3921194247092	106.15	2.119	106.24	104.58	106.7	0.099007					110	52	4	0	0	0	0.68532	1	11392	11392		33.922	6.8743	1	47497000			22524	8534	15200	15210	25888	25888					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.392333984375	2	648.393336	1294.77212	0.94475	0.00061257	-1.3677	-0.00088682	-0.42298	-0.00027426	648.3923298671006	107.11	0.98898	107.2	106.69	107.68	0.091255					92	23	4	0	0	0	0.57736	3	11440	11416;11440;11513		46.457	4.7516	1	51640000			22525	8534	15200	15210	25889;25890;25891	25890					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3924560546875	2	648.393336	1294.77212	0.94474	0.00061257	-2.1251	-0.0013779	-1.1804	-0.00076535	648.3919146413928	107.84	0.34233	107.93	107.67	108.01	0.084412					32	8	4	0	0	0	0.67778	1	11584	11584		35.152	3.6222	1	40942000			22526	8534	15200	15210	25892	25892					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.392333984375	2	648.393336	1294.77212	-1.1413	-0.00074	0.13726	8.8996E-05	-1.004	-0.000651	648.3933115061765	106.13	0.94215	106.19	105.71	106.65	0.053757					81	22	4	0	0	0	0.638	2	11318	11318;11342		40.058	7.3076	1	40329000			22527	8534	15200	15210	25893;25894	25893					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.59771728515625	3	432.597983	1294.77212	-1.8326	-0.00079276	0.99264	0.00042942	-0.83992	-0.00036335	432.5983701682112	106.14	0.94881	106.2	105.74	106.69	0.053749					97	22	5	0	0	0	0.75544	1	11348	11348		18.966	0	1	20584000			22528	8534	15200	15210	25895	25895					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3923950195312	2	648.393336	1294.77212	-1.1413	-0.00074001	0.67421	0.00043715	-0.46709	-0.00030286	648.3936534392657	107.12	0.99413	107.16	106.63	107.62	0.036118					92	23	4	0	0	0	0.69248	3	11390	11354;11366;11390		32.751	3.5805	1	53885000			22529	8534	15200	15210	25896;25897;25898	25898					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3926391601562	2	648.393336	1294.77212	-1.1412	-0.00073997	0.55376	0.00035906	-0.58747	-0.00038091	648.3936617519867	107.85	0.34956	107.88	107.62	107.97	0.036125					30	8	4	0	0	0	0.67778	1	11498	11498		35.152	2.4015	1	41447000			22530	8534	15200	15210	25899	25899					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3923950195312	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.74763	1	12827	12827		22.58	0.61977	1	2297700			22531	8534	15200	15210	25900	25900					0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	648.393336	1294.77212	1.7918	0.0011618	-1.2989	-0.00084217	0.49299	0.00031965	648.392998933616	105.88	1.0109	106.01	105.66	106.67	0.12742	-0.28727	0.00027646	NaN	45.022	61	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1940700			22532	8534	15200	15210							0.13652414651210165
KNNKLSLTLHK	11	Unmodified	_KNNKLSLTLHK_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	648.393336	1294.77212	5.7813	0.0037486	-4.794	-0.0031084	0.9873	0.00064016	648.390812655094	105.88	1.2582	106.07	105.44	106.69	0.18647	-0.22611	-0.004256	NaN	45.022	99	44	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1620900			22533	8534	15200	15210							0.13652414651210165
KNNPPLKS	8	Unmodified	_KNNPPLKS_					0	0	0		ENSG00000144909|ENST00000296220|OSBPL11	ENSG00000144909|ENST00000296220|OSBPL11	ENSG00000144909|ENST00000296220|OSBPL11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2606506347656	2	449.261259	896.507966	-1.381	-0.00062045	-0.0050338	-2.2615E-06	-1.3861	-0.00062271	449.26107911518943	71.508	1.165	71.892	71.126	72.291	0.38449					61	27	3	0	0	0	0.89962	1	7994	7994		38.806	1.7777	1	1175400			22534	4744	15201	15211	25901	25901					0.05557204617332445
KNNSQKSPK	9	Unmodified	_KNNSQKSPK_					0	0	0			REV__nc|ENSG00000211675|P0CG04|IGLC1	REV__nc|ENSG00000211675|P0CG04|IGLC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8031005859375	2	515.78563	1029.55671	0.99225	0.00051179	-2.683	-0.0013838	-1.6907	-0.00087206	515.7831125131399	22.974	0.23657	22.555	22.412	22.649	-0.41879					6	5	2	0	0	0	0.20789	1	984	984		60.118	5.3419	1	18325	+		22535	30182	15202	15212	25902	25902					0.04311073186431713
KNPAAHRL	8	Unmodified	_KNPAAHRL_					0	0	0		ENST00000445816.5_1_15:44085996-44086706:+|nuORF	ENST00000445816.5_1_15:44085996-44086706:+|nuORF	ENST00000445816.5_1_15:44085996-44086706:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7660217285156	2	453.767043	905.519533	-0.080965	-3.6739E-05	-1.8784	-0.00085237	-1.9594	-0.00088911	453.76626844051486	71.556	0.82278	72.106	71.742	72.565	0.55009					66	19	5	0	0	0	0.88915	1	8000	8000		35.201	3.2459	1	758660			22536	11830	15203	15213	25903	25903					0.06299446431319211
KNPAYIPR	8	Unmodified	_KNPAYIPR_					0	0	0		ENST00000418132.7_1_17:38296747-38323177:+|nuORF;ENSG00000108349|ENST00000264645|CASC3	ENST00000418132.7_1_17:38296747-38323177:+|nuORF	ENST00000418132.7_1_17:38296747-38323177:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.3074645996094	2	479.777077	957.5396	-1.4489	-0.00069516	2.9589	0.0014196	1.51	0.00072444	479.7784089750034	41.691	0.49021	42.105	41.937	42.427	0.4139					18	12	2	0	0	0	0.4196	1	3658	3658		17.365	0	1	261940			22537	2399	15204	15214	25904	25904					0.05913197371262413
KNPDEQEKKK	10	Unmodified	_KNPDEQEKKK_					0	0	0			REV__nc|ENSG00000146122|Q86T65-4|DAAM2	REV__nc|ENSG00000146122|Q86T65-4|DAAM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2255859375	3	415.226215	1242.65681	0.41183	0.000171	-1.4503	-0.00060222	-1.0385	-0.00043122	415.2251511443373	26.925	1.2936	26.749	26.16	27.453	-0.17559					72	28	5	0	0	0	0.86621	1	1517	1517		26.063	0	1	774990	+		22538	19989	15205	15215	25905	25905					0.045192657295501704
KNPDKERDT	9	Unmodified	_KNPDKERDT_					0	0	0			REV__ENSG00000167800|ENST00000335385|TBX10	REV__ENSG00000167800|ENST00000335385|TBX10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.77880859375	2	551.778002	1101.54145	-0.32157	-0.00017743	0.63954	0.00035288	0.31798	0.00017545	551.7780212693134	30.336	0.54678	30.361	30.135	30.681	0.025013					23	14	2	0	0	0	0.70638	1	1570	1570		40.058	5.8856	1	84239	+		22539	21429	15206	15216	25906	25906					-0.005258384014496187
KNPEVGLKPV	10	Unmodified	_KNPEVGLKPV_					0	0	0		ENSG00000136628|ENST00000366923|EPRS1	ENSG00000136628|ENST00000366923|EPRS1	ENSG00000136628|ENST00000366923|EPRS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8248901367188	2	540.824224	1079.63389	-0.12124	-6.5567E-05	0.11497	6.2178E-05	-0.0062666	-3.3891E-06	540.8240202358065	30.852	1.981	30.855	30.404	32.385	0.0037212					83	45	3	0	0	0	0.6116	1	2087	2087		49.442	8.0149	1	218080			22540	4122	15207	15217	25907	25907					0.09726291402762399
KNPHKNKTH	9	Unmodified	_KNPHKNKTH_					0	0	0		ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3065185546875	2	552.307064	1102.59957	2.2801	0.0012593	-3.3671	-0.0018597	-1.087	-0.00060038	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.76764	1	9798	9798		34.173	0	1	1797400			22541	9196	15208	15218	25908	25908					0.052378880345031575
KNPHKNKTH	9	Unmodified	_KNPHKNKTH_					0	0	0		ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.30615234375	2	552.307064	1102.59957	1.2817	0.0007079	-2.5363	-0.0014008	-1.2546	-0.00069293	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.76764	1	9666	9666		34.173	2.5383	1	1712700			22542	9196	15208	15218	25909	25909					0.052378880345031575
KNPKEAPK	8	Unmodified	_KNPKEAPK_					0	0	0		nc|ENSG00000054523|O60333-2|KIF1B;ENSG00000054523|ENST00000676179|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.26910400390625	2	456.269084	910.523616	-1.2298	-0.00056112	1.3658	0.00062319	0.13603	6.2066E-05	456.26955386041453	27.778	1.0533	27.681	27.36	28.413	-0.096945					55	24	3	0	0	0	0.66521	1	1644	1644		68.787	2.9837	1	414790			22543	1020;14755	15209	15219	25910	25910					0.06477491134364755
KNPKVPKGK	9	Unmodified	_KNPKVPKGK_					0	0	0		ENSG00000132604|ENST00000254942|TERF2	ENSG00000132604|ENST00000254942|TERF2	ENSG00000132604|ENST00000254942|TERF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.3274841308594	2	498.321651	994.62875	0.079672	3.9702E-05	4.1685	0.0020772	4.2481	0.0021169	498.323483666739	17.212	0.48333	17.275	16.903	17.386	0.062603					27	20	2	0	0	0	0.7932	1	226	226		23.042	1.3402	1	130860			22544	3809	15210	15220	25911	25911					0.13122032330807087
KNPYFDEM	8	Oxidation (M)	_KNPYFDEM(Oxidation (M))_		KNPYFDEM(1)		KNPYFDEM(63)	0	0	1			REV__nc|ENSG00000130224|Q5VUJ6-2|LRCH2	REV__nc|ENSG00000130224|Q5VUJ6-2|LRCH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.227783203125	2	530.226225	1058.4379	0.18726	9.9289E-05	3.4327	0.0018201	3.62	0.0019194	530.2279066231735	29.208	0.5835	29.32	29.087	29.67	0.11225					59	29	3	0	0	0	0.79403	1	1252	1252		63.306	6.5852	1	206490	+		22545	18856	15211	15221	25912	25912		273			-0.08898461833473448
KNQDAAQQF	9	Unmodified	_KNQDAAQQF_					0	0	0		nc|ENSG00000173898|O15020-2|SPTBN2;ENSG00000173898|ENST00000533211|SPTBN2	nc|ENSG00000173898|O15020-2|SPTBN2	nc|ENSG00000173898|O15020-2|SPTBN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	525.2559814453125	2	525.254163	1048.49377	0.24693	0.0001297	0.091109	4.7855E-05	0.33804	0.00017756	525.2538659727306	38.005	0.57835	37.947	37.673	38.252	-0.057915					36	18	3	0	0	0	0.78058	1	2215	2215		30.504	1.3541	1	153030			22546	6896	15212	15222	25913	25913					-0.02853492601616381
KNQDGEINRNI	11	Unmodified	_KNQDGEINRNI_					0	0	0		nc|ENSG00000167257|Q8ND24-2|RNF214;ENSG00000167257|ENST00000300650|RNF214	nc|ENSG00000167257|Q8ND24-2|RNF214	nc|ENSG00000167257|Q8ND24-2|RNF214	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78070068359375	3	434.224985	1299.65313	1.7009	0.00073857	-0.36073	-0.00015664	1.3402	0.00058193	434.22506928913464	35.615	0.22712	35.996	35.825	36.053	0.3812					8	5	2	0	0	0	0.1747	1	2733	2733		34.087	1.0471	1	82405			22547	6281	15213	15223	25914	25914					0.015285959557104434
KNQFITPQKQY	11	Unmodified	_KNQFITPQKQY_					0	0	0			REV__ENSG00000142534|ENST00000270625|RPS11	REV__ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.5850830078125	3	465.585743	1393.7354	0.030923	1.4397E-05	-3.2264	-0.0015021	-3.1954	-0.0014877	465.5842632332639	38.599	0.68763	38.546	38.113	38.8	-0.052727					38	20	3	0	0	0	0.74405	1	2291	2291		23.378	0.79825	1	151350	+		22548	19742	15214	15224	25915	25915					0.05428118034660656
KNQFLVLKLY	10	Unmodified	_KNQFLVLKLY_					0	0	0			REV__ENSG00000163376|ENST00000417314|KBTBD8	REV__ENSG00000163376|ENST00000417314|KBTBD8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.59295654296875	3	422.592058	1264.75434	-1.6666	-0.00070429	4.3892	0.0018548	2.7226	0.0011505	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.86698	1	4580	4580		28.081	7.2443	1	771770	+		22549	20905	15215	15225	25916	25916					0.13255699396381715
KNQFLVLKLY	10	Unmodified	_KNQFLVLKLY_					0	0	0			REV__ENSG00000163376|ENST00000417314|KBTBD8	REV__ENSG00000163376|ENST00000417314|KBTBD8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5914001464844	3	422.592058	1264.75434	-1.6251	-0.00068677	3.0046	0.0012697	1.3795	0.00058296	422.59320288156465	57.283	1.5202	57.283	56.985	58.505	0					113	60	2	0	0	0	0.85633	1	5020	5020		21.686	0.8486	1	124120	+		22550	20905	15215	15225	25917	25917					0.13255699396381715
KNQFLVLKLY	10	Unmodified	_KNQFLVLKLY_					0	0	0			REV__ENSG00000163376|ENST00000417314|KBTBD8	REV__ENSG00000163376|ENST00000417314|KBTBD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59271240234375	3	422.592058	1264.75434	0.3184	0.00013455	1.8461	0.00078016	2.1645	0.00091471	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.85834	2	4490	4490;4581		22.58	1.7425	1	1249100	+		22551	20905	15215	15225	25918;25919	25918					0.13255699396381715
KNQHTKIHK	9	Unmodified	_KNQHTKIHK_					0	0	0			REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3298950195312	2	567.330539	1132.64652	1.5887	0.00090129	-2.6625	-0.0015105	-1.0739	-0.00060923	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.78124	1	9425	9425		30.318	1.1682	1	5459400	+		22552	21859	15216	15226	25920	25920					0.08550747585650242
KNQHTKIHK	9	Unmodified	_KNQHTKIHK_					0	0	0			REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3297729492188	2	567.330539	1132.64652	1.497	0.00084932	-2.8559	-0.0016202	-1.3589	-0.00077092	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.77696	3	9852	9683;9780;9852		31.53	1.1189	1	15259000	+		22553	21859	15216	15226	25921;25922;25923	25923					0.08550747585650242
KNQHTKIHK	9	Unmodified	_KNQHTKIHK_					0	0	0			REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3302612304688	2	567.330539	1132.64652	0.79571	0.00045143	-2.2136	-0.0012558	-1.4178	-0.00080439	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.77244	3	9524	9331;9524;9610		32.812	4.9302	1	18145000	+		22554	21859	15216	15226	25924;25925;25926	25925					0.08550747585650242
KNQHTKIHK	9	Unmodified	_KNQHTKIHK_					0	0	0			REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3298950195312	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.76764	1	10907	10907		34.173	5.0025	1	6182600	+		22555	21859	15216	15226	25927	25927					0.08550747585650242
KNQHTKIHK	9	Unmodified	_KNQHTKIHK_					0	0	0			REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	REV__ENST00000465379.1_1_2:174774671-174778005:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.330078125	2	567.330539	1132.64652	0.27026	0.00015333	-1.2412	-0.00070419	-0.97098	-0.00055087	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.78536	1	11050	11050		29.15	1.2673	1	6007000	+		22556	21859	15216	15226	25928	25928					0.08550747585650242
KNQIDTDCKMI	11	Unmodified	_KNQIDTDCKMI_					0	0	0			REV__ENSG00000123165|ENST00000371124|ACTRT1	REV__ENSG00000123165|ENST00000371124|ACTRT1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2561340332031	3	436.881062	1307.62136	-1.0047	-0.00043895	-1.36	-0.00059417	-2.3648	-0.0010331	437.21496332295857	100.28	1.6	100.28	99.305	100.91	0					49	37	2	0	0	0	0.17334	1	10147	10147		34.087	2.4522	1	141270	+		22557	18530	15217	15227	25929	25929					-0.020148561141013488
KNQLGQKEI	9	Unmodified	_KNQLGQKEI_					0	0	0		ENSG00000132464|ENST00000396073|ENAM	ENSG00000132464|ENST00000396073|ENAM	ENSG00000132464|ENST00000396073|ENAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.3070678710938	2	529.303655	1056.59276	0.31119	0.00016472	3.3546	0.0017756	3.6658	0.0019403	529.3049391604524	63.318	1.3523	63.872	63.209	64.561	0.55449					67	31	3	0	0	0	0.69624	1	6842	6842		40.778	1.972	1	362440			22558	3796	15218	15228	25930	25930					0.0667253036326656
KNQNIGFNN	9	Unmodified	_KNQNIGFNN_					0	0	0		ENSG00000253710|ENST00000521508|ALG11	ENSG00000253710|ENST00000521508|ALG11	ENSG00000253710|ENST00000521508|ALG11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.82666015625	2	524.762155	1047.50976	1.241	0.00065123	4.3267	0.0022705	5.5677	0.0029217	524.761909595753	99.247	0.28321	99.295	99.18	99.463	0.047523					9	6	2	0	0	0	0.20789	1	10618	10618		53.351	17.733	1	46383			22559	8864	15219	15229	25931	25931					-0.012097863647113627
KNQSPKTVAS	10	Unmodified	_KNQSPKTVAS_					0	0	0		nc|ENSG00000113761|Q9UL40-3|ZNF346;ENSG00000113761|ENST00000358149|ZNF346;nc|ENSG00000113761|Q9UL40-2|ZNF346	nc|ENSG00000113761|Q9UL40-3|ZNF346	nc|ENSG00000113761|Q9UL40-3|ZNF346	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2928466796875	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.82886	1	9572	9572		37.812	1.3648	1	1864800			22560	2743	15220	15230	25932	25932					0.04507939983614051
KNQTTSVAKI	10	Unmodified	_KNQTTSVAKI_					0	0	0		ENST00000504173.1_1_4:77045750-77069514:-|nuORF;ENST00000508465.5_1_4:77038865-77051838:-|nuORF;ENST00000508604.5_1_4:77039101-77051958:-|nuORF;nc|ENSG00000138750|Q7Z3B4-3|NUP54;ENSG00000138750|ENST00000264883|NUP54	ENST00000504173.1_1_4:77045750-77069514:-|nuORF	ENST00000504173.1_1_4:77045750-77069514:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.316650390625	2	545.316763	1088.61897	0.73643	0.00040159	-0.91435	-0.00049861	-0.17792	-9.7022E-05	545.316117867523	88.493	3.0395	88.643	86.614	89.654	0.15055					258	71	4	0	0	0	0.86471	1	8882	8882		30.318	0	1	5181100			22561	4325	15221	15231	25933	25933					0.07820799534761136
KNQVAKNSL	9	Unmodified	_KNQVAKNSL_					0	0	0			REV__ENSG00000180113|ENST00000316081|TDRD6	REV__ENSG00000180113|ENST00000316081|TDRD6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.29046630859375	2	501.290548	1000.56654	-0.9424	-0.00047241	0.84818	0.00042518	-0.094216	-4.7229E-05	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.69624	1	8424	8424		40.778	4.3314	1	6939200	+		22562	22378	15222	15232	25934	25934					0.06628261191792717
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3033447265625	2	523.303655	1044.59276	-0.83282	-0.00043582	0.63031	0.00032984	-0.2025	-0.00010597	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.80179	3	8263	8228;8263;8407		39.253	2.5251	1	2778600	+		22563	19805	15223	15233	25935;25936;25937	25936					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.80179	6	8706	8514;8538;8562;8574;8706;8730		39.253	6.129	1	9288900	+		22564	19805	15223	15233	25938;25939;25940;25941;25942;25943	25942					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.303655	1044.59276	-0.041206	-2.1563E-05	-0.13765	-7.2034E-05	-0.17886	-9.3597E-05	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.82886	2	9058	8913;9058		37.812	3.596	1	12431000	+		22565	19805	15223	15233	25944;25945	25945					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3041381835938	2	523.303655	1044.59276	1.4247	0.00074556	-1.721	-0.00090062	-0.29632	-0.00015507	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.86698	1	8768	8768		28.081	0	1	3882100	+		22566	19805	15223	15233	25946	25946					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3033447265625	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.82886	2	9220	9220;9436		37.812	6.2817	1	13080000	+		22567	19805	15223	15233	25947;25948	25947					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3034057617188	2	523.303655	1044.59276	1.0264	0.00053713	-1.3248	-0.00069329	-0.29841	-0.00015616	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.86272	1	8772	8772		24.519	0.31644	1	3817300	+		22568	19805	15223	15233	25949	25949					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3034057617188	2	523.303655	1044.59276	-0.178	-9.3149E-05	-0.24214	-0.00012672	-0.42015	-0.00021986	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.8545	1	8429	8429		36.447	1.2947	1	4158500	+		22569	19805	15223	15233	25950	25950					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3034057617188	2	523.303655	1044.59276	-0.1734	-9.0741E-05	-0.15994	-8.3699E-05	-0.33334	-0.00017444	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.82886	3	8729	8729;8742;9104		37.812	3.639	1	13808000	+		22570	19805	15223	15233	25951;25952;25953	25951					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3032836914062	2	523.303655	1044.59276	0.69703	0.00036476	-1.0638	-0.00055667	-0.36673	-0.00019191	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.82886	2	8511	8475;8511		37.812	2.1932	1	3801600	+		22571	19805	15223	15233	25954;25955	25955					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.82886	6	8750	8725;8750;8774;8786;8893;8905		37.812	6.2817	1	13442000	+		22572	19805	15223	15233	25956;25957;25958;25959;25960;25961	25957					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.30322265625	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.86348	1	8427	8427		31.53	1.2121	1	3566700	+		22573	19805	15223	15233	25962	25962					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.303466796875	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.86272	4	10309	10297;10309;10417;10501		30.318	4.6509	1	11944000	+		22574	19805	15223	15233	25963;25964;25965;25966	25964					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3033447265625	2	523.303655	1044.59276	-0.50611	-0.00026485	0.28637	0.00014986	-0.21974	-0.00011499	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.86348	3	10086	10086;10098;10110		31.53	2.2362	1	3970100	+		22575	19805	15223	15233	25967;25968;25969	25967					0.07224530363282611
KNQVAKSITG	10	Unmodified	_KNQVAKSITG_					0	0	0			REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	REV__ENST00000479681.5_1_1:151317580-151318796:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3034057617188	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.86348	5	10366	10366;10438;10630;10642;10847		31.53	2.3598	1	13160000	+		22576	19805	15223	15233	25970;25971;25972;25973;25974	25970					0.07224530363282611
KNQVMIHGIEP	11	Unmodified	_KNQVMIHGIEP_					0	0	0		nc|ENSG00000057663|Q9H1Y0-2|ATG5;ENSG00000057663|ENST00000369076|ATG5	nc|ENSG00000057663|Q9H1Y0-2|ATG5	nc|ENSG00000057663|Q9H1Y0-2|ATG5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3687744140625	2	633.337172	1264.65979	1.4677	0.00092954	-2.3335	-0.0014779	-0.86578	-0.00054833	633.3369102857166	97.41	0.49483	97.641	97.33	97.825	0.23103					14	11	2	0	0	0	0.17574	1	10049	10049		41.427	0	1	43296			22577	1040	15224	15234	25975	25975					0.03804817582704345
KNQYNVLDLEY	11	Unmodified	_KNQYNVLDLEY_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7971496582031	3	466.901508	1397.6827	0.37431	0.00017477	-2.5907	-0.0012096	-2.2164	-0.0010348	467.2346604496129	20.045	0.55584	19.575	19.303	19.859	-0.46967					17	11	2	0	0	0	0.1767	1	618	618		9.2118	0	1	159160	+		22578	23196	15225	15235	25976	25976					-0.00023884818801889196
KNQYTNTK	8	Unmodified	_KNQYTNTK_					0	0	0		ENSG00000091009|ENST00000265271|RBM27	ENSG00000091009|ENST00000265271|RBM27	ENSG00000091009|ENST00000265271|RBM27	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.7600402832031	2	498.759081	995.503609	0.41056	0.00020477	3.2509	0.0016214	3.6615	0.0018262	498.76044891922874	30.927	0.45939	30.924	30.724	31.183	-0.0022526					28	22	2	0	0	0	0.89043	1	1393	1393		35.618	2.1027	1	74155			22579	1663	15226	15236	25977	25977					0.005676954037539872
KNQYTNTK	8	Unmodified	_KNQYTNTK_					0	0	0		ENSG00000091009|ENST00000265271|RBM27	ENSG00000091009|ENST00000265271|RBM27	ENSG00000091009|ENST00000265271|RBM27	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	498.759081	995.503609	-0.64381	-0.0003211	3.8341	0.0019123	3.1902	0.0015912	498.7609132442394	31.085	0.46368	31.148	30.97	31.433	0.063122	0.14764	0.0003365	NaN	35.618	38	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93575			22580	1663	15226	15236							0.005676954037539872
KNQYTNTK	8	Unmodified	_KNQYTNTK_					0	0	0		ENSG00000091009|ENST00000265271|RBM27	ENSG00000091009|ENST00000265271|RBM27	ENSG00000091009|ENST00000265271|RBM27	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	498.759081	995.503609	0.17078	8.518E-05	3.023	0.0015078	3.1938	0.001593	498.76038082716775	30.816	0.5184	30.928	30.718	31.236	0.11198	-0.072089	-0.00047249	NaN	35.618	31	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135030			22581	1663	15226	15236							0.005676954037539872
KNRCRKNKLI	10	Unmodified	_KNRCRKNKLI_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.305419921875	3	424.927558	1271.76084	0.13698	5.8206E-05	-4.1339	-0.0017566	-3.9969	-0.0016984	424.925727196857	21.588	0.42603	20.959	20.762	21.188	-0.62834					13	10	2	0	0	0	0.37624	1	799	799		27.047	6.0151	1	59871	+		22582	19496	15227	15237	25978	25978					0.1358331407609512
KNREGTER	8	Unmodified	_KNREGTER_					0	0	0		ENST00000329021.9_1_22:42778567-42778681:-|nuORF	ENST00000329021.9_1_22:42778567-42778681:-|nuORF	ENST00000329021.9_1_22:42778567-42778681:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2601318359375	2	495.259779	988.505006	1.1508	0.00056992	-0.61704	-0.0003056	0.53371	0.00026433	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.72312	1	2642	2642		66.429	7.6473	1	3842700			22583	10095	15228	15238	25979	25979					0.010293294925190821
KNREGTER	8	Unmodified	_KNREGTER_					0	0	0		ENST00000329021.9_1_22:42778567-42778681:-|nuORF	ENST00000329021.9_1_22:42778567-42778681:-|nuORF	ENST00000329021.9_1_22:42778567-42778681:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	495.259779	988.505006	-0.68911	-0.00034129	0.97193	0.00048136	0.28282	0.00014007	495.26026158679963	35.482	0.90787	35.513	35.284	36.192	0.031132	0.14302	0.0014869	NaN	66.429	28	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100160			22584	10095	15228	15238							0.010293294925190821
KNRELQKLPAL	11	Unmodified	_KNRELQKLPAL_					0	0	0		ENSG00000112640|ENST00000485511|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2679748535156	3	437.269866	1308.78777	-1.7045	-0.00074531	-2.8139	-0.0012304	-4.5184	-0.0019757	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.74771	1	4205	4205		22.562	4.0305	1	3449100			22585	2674	15229	15239	25980	25980					0.1457270116827658
KNRELQKLPAL	11	Unmodified	_KNRELQKLPAL_					0	0	0		ENSG00000112640|ENST00000485511|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2676086425781	3	437.269866	1308.78777	-1.6775	-0.00073351	-2.9878	-0.0013065	-4.6653	-0.00204	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.76579	1	4545	4545		18.531	3.1936	1	2305800			22586	2674	15229	15239	25981	25981					0.1457270116827658
KNRELQKLPAL	11	Unmodified	_KNRELQKLPAL_					0	0	0		ENSG00000112640|ENST00000485511|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677001953125	3	437.269866	1308.78777	-0.071191	-3.113E-05	-4.4555	-0.0019482	-4.5267	-0.0019794	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.77205	1	4504	4504		17.167	0.63689	1	3270700			22587	2674	15229	15239	25982	25982					0.1457270116827658
KNRGTKRRTS	10	Unmodified	_KNRGTKRRTS_					0	0	0		ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1	ENSG00000139641|ENST00000394048|ESYT1	ENSG00000139641|ENST00000394048|ESYT1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	603.3219604492188	2	602.355077	1202.6956	1.0113	0.00060917	0.6362	0.00038322	1.6475	0.00099239	602.3555207809885	98.141	0.44453	98.369	98.17	98.615	0.22787					18	9	2	0	0	0	0.37624	1	10154	10154		15.333	4.2363	1	67892			22588	4386	15230	15240	25983	25983					0.10236035874595473
KNRHPLKP	8	Unmodified	_KNRHPLKP_					0	0	0		ENST00000597384.1_1_19:7571970-7578873:+|nuORF	ENST00000597384.1_1_19:7571970-7578873:+|nuORF	ENST00000597384.1_1_19:7571970-7578873:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.75347900390625	2	495.303793	988.593033	-0.95251	-0.00047178	-0.31204	-0.00015455	-1.2646	-0.00062634	495.3036326213913	27.555	0.52384	27.442	27.122	27.646	-0.11383					16	11	2	0	0	0	0.4196	1	1592	1592		60.294	0	1	82742			22589	14354	15231	15241	25984	25984					0.09827994873796797
KNRKKRTY	8	Unmodified	_KNRKKRTY_					0	0	0		ENST00000262013.11_1_17:49156995-49157052:-|nuORF	ENST00000262013.11_1_17:49156995-49157052:-|nuORF	ENST00000262013.11_1_17:49156995-49157052:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.3338012695312	2	547.333082	1092.65161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.09	1	108.13	107.63	108.63	0.034355								0	0	0	0.29631	1	11884	11884		25.45	4.5032	1				22590	9426	15232	15242	25985	25985					0.10899051448291175
KNRKLVTV	8	Unmodified	_KNRKLVTV_					0	0	0			REV__ENSG00000166152|ENST00000299191|C16orf78	REV__ENSG00000166152|ENST00000299191|C16orf78	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3135681152344	2	479.313826	956.613099	-0.73483	-0.00035221	0.9249	0.00044332	0.19008	9.1108E-05	479.31418634023333	20.371	0.7595	19.741	19.536	20.295	-0.6296					23	16	2	0	0	0	0.92457	1	646	646		47.916	1.9636	1	248100	+		22591	21257	15233	15243	25986	25986					0.13305745813750036
KNRKNLSA	8	Unmodified	_KNRKNLSA_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|58|2|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|58|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77740478515625	2	465.777608	929.540663	-1.0371	-0.00048307	0.85648	0.00039893	-0.18065	-8.4142E-05	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.89043	1	7869	7869		35.618	2.1253	1	1384500	+		22592	29453	15234	15244	25987	25987					0.07307411740180214
KNRKVPSA	8	Unmodified	_KNRKVPSA_					0	0	0			REV__ENSG00000133401|ENST00000438447|PDZD2	REV__ENSG00000133401|ENST00000438447|PDZD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2745361328125	2	450.274701	898.534849	-1.247	-0.00056151	1.4065	0.00063329	0.15942	7.1784E-05	450.2752637415859	95.005	1.8382	95.236	94.9	96.739	0.23103					104	43	3	0	0	0	0.80706	1	9752	9752		19.36	0	1	829000	+		22593	19076	15235	15245	25988	25988					0.08152313228515595
KNRKVPSA	8	Unmodified	_KNRKVPSA_					0	0	0			REV__ENSG00000133401|ENST00000438447|PDZD2	REV__ENSG00000133401|ENST00000438447|PDZD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2744140625	2	450.274701	898.534849	-1.7762	-0.00079979	1.8456	0.00083102	0.069358	3.123E-05	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.82658	1	12204	12204		21.96	3.6355	1	2494900	+		22594	19076	15235	15245	25989	25989					0.08152313228515595
KNRKVRKK	8	Unmodified	_KNRKVRKK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|4|1|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|4|1|sense	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.8599853515625	2	528.859267	1055.70398	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.51	1	118.45	117.95	118.95	-0.051674								0	0	0	0.30884	1	14092	14092		13.775	0.81615	1		+		22595	29608	15236	15246	25990	25990					0.1783563458188837
KNRLSHILLN	10	Unmodified	_KNRLSHILLN_					0	0	0			REV__ENSG00000174957|ENST00000312298|OR5J2	REV__ENSG00000174957|ENST00000312298|OR5J2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.36669921875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85251	1	12218	12218		19.997	5.1319	1	3346600	+		22596	22031	15237	15247	25991	25991					0.1245987630829859
KNRLVLQT	8	Unmodified	_KNRLVLQT_					0	0	0			REV__ENSG00000129667|ENST00000675367|RHBDF2	REV__ENSG00000129667|ENST00000675367|RHBDF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.302734375	2	486.303458	970.592364	0.60689	0.00029513	-1.896	-0.00092203	-1.2891	-0.00062689	486.3024959007715	18.973	0.38395	18.496	18.218	18.602	-0.47694					15	8	3	0	0	0	0.84341	1	453	453		24.203	5.8783	1	83910	+		22597	18829	15238	15248	25992	25992					0.10589155434081476
KNRLVLQT	8	Unmodified	_KNRLVLQT_					0	0	0			REV__ENSG00000129667|ENST00000675367|RHBDF2	REV__ENSG00000129667|ENST00000675367|RHBDF2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	486.303458	970.592364	1.0113	0.00049181	-0.80716	-0.00039252	0.20416	9.9283E-05	486.303681529498	18.29	0.15382	18.365	18.298	18.452	0.075441	-0.077363	0.00036285	NaN	24.203	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16390	+		22598	18829	15238	15248							0.10589155434081476
KNRLVLQT	8	Unmodified	_KNRLVLQT_					0	0	0			REV__ENSG00000129667|ENST00000675367|RHBDF2	REV__ENSG00000129667|ENST00000675367|RHBDF2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	486.303458	970.592364	0.60689	0.00029513	-1.896	-0.00092203	-1.2891	-0.00062689	486.3024959007715	18.973	0.38395	18.496	18.218	18.602	-0.47694	0.05295	-0.00069616	NaN	24.203	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83910	+		22599	18829	15238	15248							0.10589155434081476
KNRLVLQT	8	Unmodified	_KNRLVLQT_					0	0	0			REV__ENSG00000129667|ENST00000675367|RHBDF2	REV__ENSG00000129667|ENST00000675367|RHBDF2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	486.303458	970.592364	0.026287	1.2783E-05	-0.76063	-0.0003699	-0.73435	-0.00035712	486.3027409685796	19.097	0.43112	18.467	18.28	18.711	-0.6296	0.024412	0.0004081	NaN	24.203	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85500	+		22600	18829	15238	15248							0.10589155434081476
KNRRAKWRRQK	11	Unmodified	_KNRRAKWRRQK_					0	0	0		ENSG00000133937|ENST00000238558|GSC	ENSG00000133937|ENST00000238558|GSC	ENSG00000133937|ENST00000238558|GSC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.26788330078125	3	509.646553	1525.91783	0.96273	0.00049065	3.012	0.001535	3.9747	0.0020257	509.6480657884318	16.939	0.26176	16.328	16.213	16.475	-0.6107					9	5	2	0	0	0	0.18216	1	204	204		9.6461	0	1	102740			22601	3899	15239	15249	25993	25993					0.1759073501061721
KNRRFPVRLIE	11	Unmodified	_KNRRFPVRLIE_					0	0	0			REV__nc|ENSG00000068912|Q96DZ1-2|ERLEC1	REV__nc|ENSG00000068912|Q96DZ1-2|ERLEC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.624267578125	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.78391	1	12921	12921		14.694	1.1857	1	2577100	+		22602	16570	15240	15250	25994	25994					0.1557490104507906
KNRRKTPDSK	10	Unmodified	_KNRRKTPDSK_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.3572998046875	2	615.357285	1228.70002	-0.35839	-0.00022054	0.56187	0.00034575	0.20348	0.00012521	615.3576084899992	104.75	2.3818	104.73	104.28	106.66	-0.014809					147	56	4	0	0	0	0.8651	1	11323	11323		25.574	3.8883	1	1933000			22603	7038	15241	15251	25995	25995					0.0948150029748831
KNRRKTPDSK	10	Unmodified	_KNRRKTPDSK_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	615.3576049804688	2	615.357285	1228.70002	3.0577	0.0018815	-2.8693	-0.0017657	0.18832	0.00011588	615.3555264925384	104.67	2.1648	104.63	104.19	106.35	-0.04039					150	51	4	0	0	0	0.8651	1	11531	11531		25.574	1.0549	1	2045600			22604	7038	15241	15251	25996	25996					0.0948150029748831
KNRRKTPDSK	10	Unmodified	_KNRRKTPDSK_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.3577270507812	2	615.357285	1228.70002	1.2106	0.00074497	-0.78758	-0.00048465	0.42304	0.00026032	615.3568978915573	104.33	3.2029	104.5	103.73	106.93	0.17096					209	79	4	0	0	0	0.8651	1	11121	11121		25.574	0	1	3137500			22605	7038	15241	15251	25997	25997					0.0948150029748831
KNRRKTPDSK	10	Unmodified	_KNRRKTPDSK_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	615.3578491210938	2	615.357285	1228.70002	0.91539	0.00056329	-0.77086	-0.00047435	0.14453	8.894E-05	615.356833413619	104.5	2.6486	104.62	104.11	106.76	0.11684					178	65	4	0	0	0	0.86348	1	11107	11107		31.53	1.2121	1	3488600			22606	7038	15241	15251	25998	25998					0.0948150029748831
KNRSSSLPRCC	11	Unmodified	_KNRSSSLPRCC_					0	0	0		ENST00000485529.5_1_1:170699361-170699469:+|nuORF	ENST00000485529.5_1_1:170699361-170699469:+|nuORF	ENST00000485529.5_1_1:170699361-170699469:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2898254394531	3	417.541263	1249.60196	0.13012	5.4332E-05	-2.1635	-0.00090336	-2.0334	-0.00084902	417.54024485148733	74.376	1.1546	74.767	74.458	75.612	0.3911					55	27	3	0	0	0	0.17432	1	8440	8440		21.032	0.71722	1	1072200			22607	12559	15242	15252	25999	25999					-0.012857676143312347
KNRTCLQLHKL	11	Unmodified	_KNRTCLQLHKL_					0	0	0			REV__ENST00000471702.2_2_3:132406014-132407530:-|nuORF	REV__ENST00000471702.2_2_3:132406014-132407530:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.933349609375	3	451.930968	1352.77107	0.75363	0.00034059	3.0349	0.0013716	3.7886	0.0017122	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.74002	1	10443	10443		24.276	0.89802	1	952120	+		22608	27236	15243	15253	26000	26000					0.1087987701066595
KNRVNPPN	8	Unmodified	_KNRVNPPN_					0	0	0			REV__nc|ENSG00000145868|Q6PIJ6-3|FBXO38	REV__nc|ENSG00000145868|Q6PIJ6-3|FBXO38	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7616271972656	2	469.761958	937.509363	-1.0554	-0.00049577	-1.9277	-0.00090556	-2.9831	-0.0014013	469.7608617085479	40.328	1.2889	40.334	40.071	41.36	0.0065002					73	45	3	0	0	0	0.88915	1	2594	2594		35.201	8.4046	1	435990	+		22609	19973	15244	15254	26001	26001					0.03810838706078812
KNRWVQGRWQV	11	Unmodified	_KNRWVQGRWQV_					0	0	0			REV__chr2:68047319-68050451|35|42.74|0.01|12.6|-|0|TE_info:L2a,L2a_dup20152,L2,LINE,donor,+,68050451,68051236|C1D,None|10	REV__chr2:68047319-68050451|35|42.74|0.01|12.6|-|0|TE_info:L2a,L2a_dup20152,L2,LINE,donor,+,68050451,68051236|C1D,None|10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.2672424316406	3	486.26886	1455.78475	-0.31104	-0.00015125	-3.774	-0.0018352	-4.085	-0.0019864	486.26694428668225	33.231	0.79888	33.177	32.9	33.699	-0.05434					57	19	4	0	0	0	0.77205	1	2001	2001		17.167	1.2461	1	321760	+		22610	15763	15245	15255	26002	26002					0.07508870834112713
KNSDDIDKQY	10	Unmodified	_KNSDDIDKQY_					0	0	0		ENSG00000178502|ENST00000319121|KLHL11	ENSG00000178502|ENST00000319121|KLHL11	ENSG00000178502|ENST00000319121|KLHL11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	613.2908935546875	2	613.288399	1224.56225	-0.38521	-0.00023625	4.1167	0.0025247	3.7315	0.0022885	613.290841465229	62.778	1.1508	62.772	62.454	63.605	-0.0055504					134	54	4	0	0	0	0.44803	1	5861	5861		60.118	3.6845	1	912360			22611	7210	15246	15256	26003	26003					-0.041052928124372556
KNSEAVKLSLK	11	Unmodified	_KNSEAVKLSLK_					0	0	0			REV__ENSG00000165490|ENST00000533655|DDIAS	REV__ENSG00000165490|ENST00000533655|DDIAS	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24853515625	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.91	1	117.89	117.39	118.39	-0.02433								0	0	0	0.56276	1	13059	13059		14.779	0.085136	1		+		22612	21187	15247	15257	26004	26004					0.1194561714869451
KNSGWILVK	9	Unmodified	_KNSGWILVK_					0	0	0			REV__MER11B_dup109|chr4:246912-248001:-|1.1537234201781927|0.0844565193760445|3.77|63.0|67|2|anti-sense	REV__MER11B_dup109|chr4:246912-248001:-|1.1537234201781927|0.0844565193760445|3.77|63.0|67|2|anti-sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3153076171875	2	522.813659	1043.61277	-0.65178	-0.00034076	0.6414	0.00033533	-0.010382	-5.4279E-06	522.813825456028	39.403	0.97351	39.77	39.299	40.273	0.36797					39	22	2	0	0	0	0.20789	1	3239	3239		19.997	3.5236	1	346280	+		22613	29643	15248	15258	26005	26005					0.09270326093906078
KNSHLLAP	8	Unmodified	_KNSHLLAP_					0	0	0			REV__ENSG00000185634|ENST00000332408|SHC4	REV__ENSG00000185634|ENST00000332408|SHC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2563171386719	2	440.255977	878.497401	-1.4732	-0.0006486	0.019542	8.6034E-06	-1.4537	-0.00064	440.255873281753	75.377	0.64651	75.502	75.091	75.737	0.12545					28	16	2	0	0	0	0.89962	1	7013	7013		38.806	5.2906	1	97336	+		22614	22782	15249	15259	26006	26006					0.05329221962892916
KNSKSPKNK	9	Unmodified	_KNSKSPKNK_					0	0	0			REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8024291992188	2	515.803823	1029.59309	0.78398	0.00040438	-0.88024	-0.00045403	-0.096256	-4.9649E-05	515.8032269783904	23.016	0.76294	22.442	22.157	22.92	-0.57415					45	18	4	0	0	0	0.51592	1	975	975		51.193	1.7511	1	679090	+		22615	21050	15250	15260	26007	26007					0.07947950083121214
KNSLVIRWLWL	11	Unmodified	_KNSLVIRWLWL_					0	0	0		ENST00000434982.2_1_5:55407235-55412649:-|nuORF;ENST00000341048.8_1_5:55407235-55422869:-|nuORF	ENST00000434982.2_1_5:55407235-55412649:-|nuORF	ENST00000434982.2_1_5:55407235-55412649:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6240539550781	3	476.62224	1426.84489	2.8124	0.0013405	-0.29111	-0.00013875	2.5213	0.0012017	476.622006004692	107.89	0.57175	107.86	107.34	107.92	-0.031487					38	13	5	0	0	0	0.77205	1	11962	11962		17.167	7.0628	1	133400000			22616	10239	15251	15261	26008	26008					0.1485416844463998
KNSLVIRWLWL	11	Unmodified	_KNSLVIRWLWL_					0	0	0		ENST00000434982.2_1_5:55407235-55412649:-|nuORF;ENST00000341048.8_1_5:55407235-55422869:-|nuORF	ENST00000434982.2_1_5:55407235-55412649:-|nuORF	ENST00000434982.2_1_5:55407235-55412649:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.62310791015625	3	476.62224	1426.84489	2.8112	0.0013399	0.24063	0.00011469	3.0518	0.0014546	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.7896	2	12448	12448;13114		13.508	1.3361	1	2689700			22617	10239	15251	15261	26009;26010	26009					0.1485416844463998
KNSNLVRL	8	Unmodified	_KNSNLVRL_					0	0	0		ENSG00000145604|ENST00000274255|SKP2;nc|ENSG00000145604|Q13309-2|SKP2;nc|ENSG00000145604|Q13309-4|SKP2	ENSG00000145604|ENST00000274255|SKP2	ENSG00000145604|ENST00000274255|SKP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28778076171875	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.86677	1	10084	10084		27.882	2.4321	1	48696000			22618	4779	15252	15262	26011	26011					0.08748582400005489
KNSNLVRL	8	Unmodified	_KNSNLVRL_					0	0	0		ENSG00000145604|ENST00000274255|SKP2;nc|ENSG00000145604|Q13309-2|SKP2;nc|ENSG00000145604|Q13309-4|SKP2	ENSG00000145604|ENST00000274255|SKP2	ENSG00000145604|ENST00000274255|SKP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28765869140625	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.87064	1	12120	12120		29.15	1.2673	1	3080300			22619	4779	15252	15262	26012	26012					0.08748582400005489
KNSTLVKID	9	Unmodified	_KNSTLVKID_					0	0	0		nc|ENSG00000256660|Q2HXU8-2|CLEC12B;ENSG00000256660|ENST00000338896|CLEC12B	nc|ENSG00000256660|Q2HXU8-2|CLEC12B	nc|ENSG00000256660|Q2HXU8-2|CLEC12B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.77410888671875	2	509.300581	1016.58661	-0.23961	-0.00012203	-2.3929	-0.0012187	-2.6325	-0.0013408	509.29941740664594	74.629	0.57084	75.02	74.787	75.358	0.3911					32	13	3	0	0	0	0.20789	1	8441	8441		19.997	2.6318	1	323100			22620	8899	15253	15263	26013	26013					0.07898012131749965
KNSTNLIQTPQ	11	Unmodified	_KNSTNLIQTPQ_					0	0	0		ENSG00000060749|ENST00000650167|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1;nc|ENSG00000060749|Q2KHR3-2|QSER1	ENSG00000060749|ENST00000650167|QSER1	ENSG00000060749|ENST00000650167|QSER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.22552490234375	3	415.226215	1242.65681	0.41183	0.000171	-1.4503	-0.00060222	-1.0385	-0.00043122	415.2251511443373	26.925	1.2936	26.749	26.16	27.453	-0.17559					72	28	5	0	0	0	0.72892	1	1506	1506		26.75	1.6237	1	774990			22621	1069	15254	15264	26014	26014					0.04519265729572908
KNSTNLIQTPQ	11	Unmodified	_KNSTNLIQTPQ_					0	0	0		ENSG00000060749|ENST00000650167|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1;nc|ENSG00000060749|Q2KHR3-2|QSER1	ENSG00000060749|ENST00000650167|QSER1	ENSG00000060749|ENST00000650167|QSER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.22589111328125	3	415.226215	1242.65681	1.8471	0.00076696	-2.9213	-0.001213	-1.0742	-0.00044604	415.2246933890348	26.889	0.89677	26.548	26.096	26.992	-0.34035					67	19	6	0	0	0	0.64964	1	1509	1509		38.714	11.964	1	829090			22622	1069	15254	15264	26015	26015					0.04519265729572908
KNSTNTSAI	9	Unmodified	_KNSTNTSAI_					0	0	0			REV__nc|ENSG00000135341|O43318-4|MAP3K7	REV__nc|ENSG00000135341|O43318-4|MAP3K7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.2443542480469	2	468.243264	934.471974	1.5636	0.00073216	1.6106	0.00075416	3.1742	0.0014863	468.24393939055693	104.95	1.9475	105.11	104.25	106.2	0.15583					117	51	4	0	0	0	0.64922	1	12791	12791		44.117	5.3107	1	962920	+		22623	15894	15255	15265	26016	26016					0.0021170264981265063
KNSTNTSAI	9	Unmodified	_KNSTNTSAI_					0	0	0			REV__nc|ENSG00000135341|O43318-4|MAP3K7	REV__nc|ENSG00000135341|O43318-4|MAP3K7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	468.243264	934.471974	0.23254	0.00010889	2.0241	0.00094779	2.2567	0.0010567	468.2440809909969	104.82	0.58076	104.86	104.59	105.17	0.039864	-0.17975	0.0012905	NaN	44.117	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97524	+		22624	15894	15255	15265							0.0021170264981265063
KNSVKVMYKCL	11	Unmodified	_KNSVKVMYKCL_					0	0	0		ENSG00000186918|ENST00000344423|ZNF395	ENSG00000186918|ENST00000344423|ZNF395	ENSG00000186918|ENST00000344423|ZNF395	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2397155761719	3	438.242043	1311.7043	-1.2709	-0.00055695	-3.7063	-0.0016242	-4.9771	-0.0021812	438.2402874427309	72.883	0.77341	73.269	72.917	73.69	0.38581					52	18	4	0	0	0	0.6493	1	8154	8154		38.754	5.7142	1	1069800			22625	7828	15256	15266	26017	26017					0.060915054045608485
KNSYQIPWL	9	Unmodified	_KNSYQIPWL_					0	0	0			REV__ENST00000606296.1_1_3:18393447-18393747:-|nuORF	REV__ENST00000606296.1_1_3:18393447-18393747:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.8069458007812	2	574.808574	1147.60259	-0.31971	-0.00018377	-3.032	-0.0017428	-3.3517	-0.0019266	574.8065752551452	33.893	0.70363	33.895	33.586	34.289	0.0026054					36	15	3	0	0	0	0.41566	1	2026	2026		56.721	1.9447	1	176100	+		22626	27162	15257	15267	26018	26018					0.03469718368660324
KNTASLIAN	9	Unmodified	_KNTASLIAN_					0	0	0		ENST00000422953.1_1_9:5085001-5085526:-|nuORF	ENST00000422953.1_1_9:5085001-5085526:-|nuORF	ENST00000422953.1_1_9:5085001-5085526:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2643737792969	2	466.263999	930.513445	0.2043	9.5259E-05	0.30829	0.00014374	0.51259	0.000239	466.2642740285504	23.853	0.72795	23.471	23.199	23.927	-0.38178					22	16	2	0	0	0	0.73802	1	1109	1109		37.812	6.2817	1	271990			22627	11489	15258	15268	26019	26019					0.04540883409140406
KNTGRQLKD	9	Unmodified	_KNTGRQLKD_					0	0	0		ENSG00000111670|ENST00000299314|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.304931640625	2	530.298904	1058.58326	0.084425	4.4771E-05	-4.4582	-0.0023642	-4.3738	-0.0023194	530.2971960000838	63.84	1.2034	64.227	63.746	64.95	0.3868					35	27	2	0	0	0	0.20789	1	6834	6834		37.812	15.852	1	229300			22628	2599	15259	15269	26020	26020					0.05630762077748841
KNTIFMSC	8	Unmodified	_KNTIFMSC_					0	0	0			REV__nc|ENSG00000185792|Q7RTR0-2|NLRP9	REV__nc|ENSG00000185792|Q7RTR0-2|NLRP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2219543457031	2	472.222431	942.430309	0.21504	0.00010155	-1.0116	-0.00047768	-0.79652	-0.00037613	472.2219574332987	38.584	0.60174	38.678	38.396	38.997	0.094322					38	18	3	0	0	0	0.89494	1	2310	2310		37.159	0	1	210410	+		22629	22792	15260	15270	26021	26021					-0.0432089263472335
KNTIPHGI	8	Unmodified	_KNTIPHGI_					0	0	0			REV__nc|ENSG00000151914|Q03001-3|DST	REV__nc|ENSG00000151914|Q03001-3|DST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2556457519531	2	440.255977	878.497401	-0.13759	-6.0575E-05	-1.3498	-0.00059426	-1.4874	-0.00065483	440.25529250132934	77.261	1.0124	77.667	77.331	78.343	0.40531					46	24	3	0	0	0	0.89494	1	8808	8808		37.159	4.3467	1	694870	+		22630	29932	15261	15271	26022	26022					0.05329221962904285
KNTITELTQL	10	Unmodified	_KNTITELTQL_					0	0	0			REV__ENSG00000165124|ENST00000374469|SVEP1	REV__ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8314819335938	2	580.829703	1159.64485	-1.0916	-0.00063402	2.1904	0.0012723	1.0989	0.00063826	580.8307679449848	59.536	0.88874	60.089	59.574	60.463	0.55323					49	22	3	0	0	0	0.21012	1	6263	6263		83.647	8.6037	1	1358100	+		22631	21151	15262	15272	26023	26023					0.07141648986385007
KNTLSAAEGSL	11	Unmodified	_KNTLSAAEGSL_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.2908325195312	2	545.790578	1089.5666	-1.2147	-0.00066297	1.3124	0.00071627	0.097654	5.3298E-05	545.7909942690995	56.78	0.6445	57.177	56.853	57.498	0.39672					37	14	4	0	0	0	0.37012	1	5909	5909		61.691	1.7605	1	1132600	+		22632	30102	15263	15273	26024	26024					0.0254021640114388
KNTVDIAEG	9	Unmodified	_KNTVDIAEG_					0	0	0		ENSG00000230873|ENST00000536551|STMND1	ENSG00000230873|ENST00000536551|STMND1	ENSG00000230873|ENST00000536551|STMND1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2184753417969	2	473.745639	945.476725	0.71174	0.00033718	-0.93786	-0.00044431	-0.22612	-0.00010712	473.7451895937537	24.068	0.43625	23.686	23.491	23.927	-0.38178					14	9	2	0	0	0	0.20789	1	1112	1112		22.58	10.373	1	41851			22633	8733	15264	15274	26025	26025					0.0018058679256682808
KNTVDIAEG	9	Unmodified	_KNTVDIAEG_					0	0	0		ENSG00000230873|ENST00000536551|STMND1	ENSG00000230873|ENST00000536551|STMND1	ENSG00000230873|ENST00000536551|STMND1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	473.745639	945.476725	0.61876	0.00029313	-1.6882	-0.00079979	-1.0695	-0.00050666	473.74488572551115	24.028	0.51006	23.514	23.28	23.79	-0.51365	-0.085984	-0.00036704	NaN	22.58	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40973			22634	8733	15264	15274							0.0018058679256682808
KNVARGRLTY	10	Unmodified	_KNVARGRLTY_					0	0	0		ENSG00000113805|ENST00000263665|CNTN3	ENSG00000113805|ENST00000263665|CNTN3	ENSG00000113805|ENST00000263665|CNTN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3427124023438	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86348	1	9952	9952		31.53	2.3803	1	17904000			22635	2746	15265	15275	26026	26026					0.09147016757151505
KNVARGRLTY	10	Unmodified	_KNVARGRLTY_					0	0	0		ENSG00000113805|ENST00000263665|CNTN3	ENSG00000113805|ENST00000263665|CNTN3	ENSG00000113805|ENST00000263665|CNTN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3431396484375	2	589.343646	1176.67274	-1.05	-0.00061881	0.02406	1.418E-05	-1.0259	-0.00060463	589.3435611680267	91.272	1.3839	91.742	90.644	92.028	0.47068					106	33	4	0	0	0	0.86272	1	10830	10830		24.519	0.99649	1	1967800			22636	2746	15265	15275	26027	26027					0.09147016757151505
KNVEKPLIG	9	Unmodified	_KNVEKPLIG_					0	0	0		ENST00000510175.5_1_4:155055-155787:+|nuORF	ENST00000510175.5_1_4:155055-155787:+|nuORF	ENST00000510175.5_1_4:155055-155787:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.30413818359375	2	499.305667	996.596781	-0.37246	-0.00018597	0.86347	0.00043114	0.49102	0.00024517	499.30608248547827	25.919	0.81447	25.662	25.175	25.99	-0.2572					43	18	4	0	0	0	0.6204	1	1370	1370		45.972	10.354	1	198600			22637	13004	15266	15276	26028	26028					0.0983461985700842
KNVEKPLIG	9	Unmodified	_KNVEKPLIG_					0	0	0		ENST00000510175.5_1_4:155055-155787:+|nuORF	ENST00000510175.5_1_4:155055-155787:+|nuORF	ENST00000510175.5_1_4:155055-155787:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	499.305667	996.596781	2.5883	0.0012923	-2.3542	-0.0011755	0.23408	0.00011688	499.30452757705115	25.928	0.84452	25.497	24.983	25.827	-0.4311	-0.082275	-0.0019891	NaN	45.972	32	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	195240			22638	13004	15266	15276							0.0983461985700842
KNVKRAQS	8	Unmodified	_KNVKRAQS_					0	0	0			REV__nc|ENSG00000167525|Q8NCQ7-2|PROCA1	REV__nc|ENSG00000167525|Q8NCQ7-2|PROCA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7776794433594	2	465.777608	929.540663	-0.25577	-0.00011913	0.16818	7.8335E-05	-0.08759	-4.0797E-05	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.8347	1	7816	7816		23.042	0	1	451640	+		22639	21392	15267	15277	26029	26029					0.07307411740180214
KNVKTEKGI	9	Unmodified	_KNVKTEKGI_					0	0	0		chr9:15044050-15047899|20|20.5|0.0|20.97|-|1|None,CLCN3P1|1;chr9:14990345-15047899|17|15.41|0.0|20.56|-|1|None,CLCN3P1|1	chr9:15044050-15047899|20|20.5|0.0|20.97|-|1|None,CLCN3P1|1	chr9:15044050-15047899|20|20.5|0.0|20.97|-|1|None,CLCN3P1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.8077087402344	2	508.808574	1015.60259	0.65318	0.00033234	-2.4261	-0.0012344	-1.7729	-0.00090206	508.80731297639136	83.188	1.9706	83.335	82.631	84.602	0.14695					106	45	4	0	0	0	0.7932	1	8044	8044		26.693	6.2111	1	3797600			22640	528	15268	15278	26030	26030					0.09541718368666352
KNVLHSARLLG	11	Unmodified	_KNVLHSARLLG_					0	0	0		nc|ENSG00000091483|P07954-2|FH;ENSG00000091483|ENST00000366560|FH	nc|ENSG00000091483|P07954-2|FH	nc|ENSG00000091483|P07954-2|FH	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3668212890625	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.27	1	114.25	113.75	114.75	-0.024452								0	0	0	0.56276	1	12658	12658		18.262	1.7889	1				22641	1677	15269	15279	26031	26031					0.12459876308275852
KNVLKETNF	9	Unmodified	_KNVLKETNF_					0	0	0		nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	nc|ENSG00000127914|Q99996-5|AKAP9	nc|ENSG00000127914|Q99996-5|AKAP9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2470092773438	2	546.806031	1091.59751	1.2911	0.00070598	-2.1256	-0.0011623	-0.83455	-0.00045634	546.8047477715453	27.385	0.86469	27.13	26.811	27.676	-0.25465					32	19	2	0	0	0	0.20789	1	1591	1591		42.396	0	1	297360			22642	3517	15270	15280	26032	26032					0.05537414506034111
KNVNLKKDS	9	Unmodified	_KNVNLKKDS_					0	0	0		ENST00000485737.1_1_3:47721925-47742822:-|nuORF;ENSG00000173473|ENST00000254480|SMARCC1	ENST00000485737.1_1_3:47721925-47742822:-|nuORF	ENST00000485737.1_1_3:47721925-47742822:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3035278320312	2	523.303655	1044.59276	1.1688	0.00061163	-1.3622	-0.00071286	-0.19344	-0.00010123	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.64555	1	9325	9325		44.377	1.5129	1	12580000			22643	6861	15271	15281	26033	26033					0.07224530363282611
KNVQGKRKISP	11	Unmodified	_KNVQGKRKISP_					0	0	0		nc|ENSG00000035928|P35251|RFC1;ENSG00000035928|ENST00000349703|RFC1	nc|ENSG00000035928|P35251|RFC1	nc|ENSG00000035928|P35251|RFC1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.8843994140625	2	627.885678	1253.7568	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.06	1	112.09	111.59	112.59	0.028854								0	0	0	0.56276	1	12257	12257		23.523	3.5259	1				22644	900	15272	15282	26034	26034					0.14007547854043878
KNVRKRRFRKT	11	Unmodified	_KNVRKRRFRKT_					0	0	0		ENSG00000178913|ENST00000313368|TAF7	ENSG00000178913|ENST00000313368|TAF7	ENSG00000178913|ENST00000313368|TAF7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7588806152344	3	496.983054	1487.92733	-2.1177	-0.0010525	-2.8845	-0.0014335	-5.0022	-0.002486	497.3154680404385	40.173	0.78815	40.541	39.983	40.772	0.36797					28	19	2	0	0	0	0.18159	1	3375	3375		8.4073	5.1959	1	188250			22645	7230	15273	15283	26035	26035					0.20288503296137606
KNVVHKTGG	9	Unmodified	_KNVVHKTGG_					0	0	0		ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2	ENSG00000088930|ENST00000377191|XRN2	ENSG00000088930|ENST00000377191|XRN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.27215576171875	2	470.272158	938.529764	-1.0259	-0.00048243	0.96935	0.00045586	-0.056507	-2.6574E-05	470.27263416214146	92.531	3.2683	92.531	91.425	94.693	0					153	75	5	0	0	0	0.7932	1	9140	9140		25.574	5.5773	1	1224900			22646	1600	15274	15284	26036	26036					0.05804009365908769
KNVYAIIMLTK	11	Unmodified	_KNVYAIIMLTK_					0	0	0		ENSG00000149177|ENST00000418331|PTPRJ;nc|ENSG00000149177|Q12913-3|PTPRJ	ENSG00000149177|ENST00000418331|PTPRJ	ENSG00000149177|ENST00000418331|PTPRJ	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	431.30523681640625	3	431.92482	1292.75263	-1.4147	-0.00061106	0.26659	0.00011515	-1.1482	-0.00049592	431.9248102094948	76.188	1.2615	76.277	75.492	76.754	0.089363					86	39	3	0	0	0	0.17497	1	7149	7149		37.6	3.5134	1	119800			22647	5001	15275	15285	26037	26037					0.11796322316081387
KNWVVELA	8	Unmodified	_KNWVVELA_					0	0	0			REV__ENSG00000137766|ENST00000260323|UNC13C	REV__ENSG00000137766|ENST00000260323|UNC13C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.97406005859375	2	479.77146	957.528367	-1.39	-0.00066689	-3.4117	-0.0016368	-4.8017	-0.0023037	479.76967118023043	41.805	0.38023	42.219	42.125	42.505	0.4139					10	9	2	0	0	0	0.4196	1	3671	3671		47.916	7.343	1	135150	+		22648	19405	15276	15286	26038	26038					0.04790375277138992
KNYITPEELRR	11	Unmodified	_KNYITPEELRR_					0	0	0		ENSG00000248746|ENST00000513398|ACTN3	ENSG00000248746|ENST00000513398|ACTN3	ENSG00000248746|ENST00000513398|ACTN3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2536315917969	3	473.596531	1417.76776	-0.36267	-0.00017176	-1.7631	-0.00083502	-2.1258	-0.0010068	473.5956633204301	22.753	0.30134	22.142	21.952	22.253	-0.6107					9	6	2	0	0	0	0.17365	1	954	954		21.032	0	1	80711			22649	8833	15277	15287	26039	26039					0.0755890543764508
KNYTAQHF	8	Unmodified	_KNYTAQHF_					0	0	0			REV__nc|ENSG00000119772|Q9Y6K1-2|DNMT3A	REV__nc|ENSG00000119772|Q9Y6K1-2|DNMT3A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34796142578125	2	504.748516	1007.48248	0.35182	0.00017758	-1.609	-0.00081214	-1.2572	-0.00063456	505.24998652388643	35.198	0.42702	35.446	35.203	35.63	0.24769					13	10	2	0	0	0	0.4196	1	2639	2639		18.324	0.95945	1	51066	+		22650	15754	15278	15288	26040	26040					-0.020962699051096934
KPAAGAGG	8	Unmodified	_KPAAGAGG_					0	0	0			REV__ENSG00000215474|ENST00000425639|SKOR2	REV__ENSG00000215474|ENST00000425639|SKOR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	628.6478881835938	1	628.341301	627.334024	0.63225	0.00039727	-0.40791	-0.00025631	0.22435	0.00014097	628.3388366309008	68.153	0.84003	68.281	67.471	68.311	0.12838					34	30	2	0	0	0	0.4196	1	6039	6039		13.775	0	1	87062	+		22651	23686	15279	15289	26041	26041					0.005450439118590111
KPADKSQKP	9	Unmodified	_KPADKSQKP_					0	0	0			REV__ENSG00000129250|ENST00000320785|KIF1C	REV__ENSG00000129250|ENST00000320785|KIF1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7849426269531	2	499.785099	997.555644	0.13762	6.8781E-05	0.14605	7.2992E-05	0.28367	0.00014177	499.7848972129623	22.235	0.86917	21.624	21.295	22.164	-0.6107					38	21	3	0	0	0	0.55097	1	876	876		49.442	0	1	416620	+		22652	18814	15280	15290	26042	26042					0.05676858817514585
KPAEATPKP	9	Unmodified	_KPAEATPKP_					0	0	0			REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.77130126953125	2	469.768917	937.523281	-0.079031	-3.7126E-05	4.334	0.002036	4.255	0.0019989	469.7701996920163	41.983	0.67488	41.937	41.71	42.385	-0.045467					21	18	2	0	0	0	0.78983	1	2796	2796		27.882	2.4321	1	60162	+		22653	21391	15281	15291	26043	26043					0.0520207141452147
KPAEATPKP	9	Unmodified	_KPAEATPKP_					0	0	0			REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	469.768917	937.523281	-1.77	-0.00083149	6.3026	0.0029608	4.5326	0.0021293	469.77135781006933	41.843	0.46115	41.843	41.642	42.103	0	-0.23645	0.00068293	NaN	27.882	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67800	+		22654	21391	15281	15291							0.0520207141452147
KPAEATPKP	9	Unmodified	_KPAEATPKP_					0	0	0			REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	469.768917	937.523281	-1.1422	-0.00053658	4.6849	0.0022008	3.5426	0.0016642	469.77109084498994	42.11	0.37827	42.071	41.936	42.315	-0.038223	-0.0081533	-0.000837	NaN	27.882	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60642	+		22655	21391	15281	15291							0.0520207141452147
KPAEATPKP	9	Unmodified	_KPAEATPKP_					0	0	0			REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	469.768917	937.523281	0.24294	0.00011413	5.1769	0.0024319	5.4198	0.0025461	469.7713371090957	42.015	0.64489	42.083	41.661	42.306	0.067966	0.0030182	-0.00037476	NaN	27.882	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58577	+		22656	21391	15281	15291							0.0520207141452147
KPAEATPKP	9	Unmodified	_KPAEATPKP_					0	0	0			REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	469.768917	937.523281	-0.079031	-3.7126E-05	4.334	0.002036	4.255	0.0019989	469.7701996920163	41.983	0.67488	41.937	41.71	42.385	-0.045467	-0.14228	-0.0011666	NaN	27.882	21	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60162	+		22657	21391	15281	15291							0.0520207141452147
KPAEATPKP	9	Unmodified	_KPAEATPKP_					0	0	0			REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	469.768917	937.523281	-2.0811	-0.00097765	5.6896	0.0026728	3.6085	0.0016952	469.7715318316523	41.818	0.57417	42.232	42.011	42.585	0.4139	0.15242	0.00010702	NaN	27.882	26	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	385260	+		22658	21391	15281	15291							0.0520207141452147
KPAEATPKP	9	Unmodified	_KPAEATPKP_					0	0	0			REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	469.768917	937.523281	-2.2172	-0.0010416	6.1007	0.0028659	3.8835	0.0018243	469.7715293166709	41.677	0.49582	42.311	42.172	42.668	0.6339	0.23144	0.00049319	NaN	27.882	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	498300	+		22659	21391	15281	15291							0.0520207141452147
KPAKETTQ	8	Unmodified	_KPAKETTQ_					0	0	0		ENST00000569023.5_1_16:20911807-20913883:+|nuORF;ENST00000562740.5_1_16:20912077-20913883:+|nuORF	ENST00000569023.5_1_16:20911807-20913883:+|nuORF	ENST00000569023.5_1_16:20911807-20913883:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.23919677734375	2	451.750724	901.486896	-0.37607	-0.00016989	1.5223	0.00068769	1.1462	0.0005178	451.7510303422487	25.163	0.49111	24.835	24.613	25.104	-0.32825					15	10	2	0	0	0	0.4196	1	1296	1296		23.042	12.777	1	39205			22660	13853	15282	15292	26044	26044					0.03221194517800541
KPALGRKP	8	Unmodified	_KPALGRKP_					0	0	0			REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7795715332031	2	433.782162	865.549771	-1.7067	-0.00074033	-2.7555	-0.0011953	-4.4622	-0.0019356	433.7819459773158	51.312	5.3307	51.312	50.734	56.065	0					552	155	5	0	0	0	0.82419	1	4629	4629		13.775	0	1	1514200	+		22661	30095	15283	15293	26045	26045					0.11161805096503485
KPAPKTHT	8	Unmodified	_KPAPKTHT_					0	0	0			REV__ENST00000470336.5_1_3:100469341-100565327:-|nuORF	REV__ENST00000470336.5_1_3:100469341-100565327:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2549743652344	2	440.255977	878.497401	-0.98132	-0.00043203	-0.72631	-0.00031976	-1.7076	-0.00075179	440.2555879612135	73.888	0.66461	74.276	73.956	74.62	0.38779					36	16	3	0	0	0	0.87064	1	8311	8311		29.15	6.1071	1	722590	+		22662	27207	15284	15294	26046	26046					0.053292219628815474
KPAPKTHT	8	Unmodified	_KPAPKTHT_					0	0	0			REV__ENST00000470336.5_1_3:100469341-100565327:-|nuORF	REV__ENST00000470336.5_1_3:100469341-100565327:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2550048828125	2	440.255977	878.497401	0.40701	0.00017919	-1.6183	-0.00071247	-1.2113	-0.00053328	440.25507557275375	63.556	1.6285	64.111	63.598	65.226	0.55449					91	38	4	0	0	0	0.884	1	6825	6825		33.516	4.366	1	1465000	+		22663	27207	15284	15294	26047	26047					0.053292219628815474
KPAPPKSAQP	10	Unmodified	_KPAPPKSAQP_					0	0	0			REV__nc|ENSG00000164830|Q8N573-5|OXR1	REV__nc|ENSG00000164830|Q8N573-5|OXR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.79583740234375	2	510.795466	1019.57638	2.77	0.0014149	-1.8443	-0.00094206	0.92571	0.00047285	510.7937006198357	26.335	0.57825	25.995	25.745	26.323	-0.34035					28	12	4	0	0	0	0.64457	1	1449	1449		47.657	10.498	1	160580	+		22664	21120	15285	15295	26048	26048					0.06737449197180467
KPAPPPPAV	9	Unmodified	_KPAPPPPAV_					0	0	0			REV__nc|ENSG00000135439|Q99490|AGAP2	REV__nc|ENSG00000135439|Q99490|AGAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26495361328125	2	437.263271	872.511988	1.7524	0.00076626	3.4445	0.0015062	5.1969	0.0022724	437.264848658338	24.04	1.4327	23.526	22.938	24.371	-0.51365					98	32	5	0	0	0	0.7932	1	1222	1222		24.203	3.7209	1	13559000	+		22665	19222	15286	15296	26049	26049					0.07063294111026153
KPARKRRRR	9	Unmodified	_KPARKRRRR_					0	0	0		nc|ENSG00000181090|Q9H9B1-4|EHMT1;ENST00000371394.6_1_9:140611085-140686569:+|nuORF;nc|ENSG00000181090|Q9H9B1-3|EHMT1;ENSG00000181090|ENST00000460843|EHMT1	nc|ENSG00000181090|Q9H9B1-4|EHMT1	nc|ENSG00000181090|Q9H9B1-4|EHMT1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	409.2918395996094	3	408.605918	1222.79592	0.46152	0.00018858	-0.24858	-0.00010157	0.21294	8.7008E-05	408.6056346213771	18.931	0.5965	18.908	18.656	19.252	-0.023342					37	26	2	0	0	0	0.20789	1	383	383		23.523	7.5159	1	88337			22666	7372	15287	15297	26050	26050					0.1934373771891842
KPAVPDRP	8	Unmodified	_KPAVPDRP_					0	0	0		ENST00000434578.6_2_1:15480274-15537010:+|nuORF;ENST00000400796.7_1_1:15480274-15541469:+|nuORF	ENST00000434578.6_2_1:15480274-15537010:+|nuORF	ENST00000434578.6_2_1:15480274-15537010:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.2550964355469	2	440.255977	878.497401	0.56693	0.00024959	-1.6828	-0.00074086	-1.1159	-0.00049126	440.25498228368036	67.776	1.0155	67.806	67.426	68.441	0.030563					83	37	3	0	0	0	0.8621	1	6467	6467		26.693	4.9906	1	230880			22667	11228	15288	15298	26051	26051					0.05329221962892916
KPAVSFLHK	9	Unmodified	_KPAVSFLHK_					0	0	0		ENST00000264039.6_1_2:241407315-241407444:+|nuORF	ENST00000264039.6_1_2:241407315-241407444:+|nuORF	ENST00000264039.6_1_2:241407315-241407444:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8087768554688	2	513.808377	1025.6022	-0.38547	-0.00019806	1.7192	0.00088333	1.3337	0.00068527	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.7932	1	3841	3841		24.519	0.31644	1	1377600			22668	9474	15289	15299	26052	26052					0.0904234343945518
KPAWKGSQ	8	Unmodified	_KPAWKGSQ_					0	0	0		ENSG00000181381|ENST00000682922|DDX60L;ENST00000510590.1_1_4:169298892-169300981:-|nuORF	ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2482604980469	2	451.248152	900.481751	-1.4716	-0.00066404	2.9168	0.0013162	1.4452	0.00065215	451.24928193885836	68.02	1.4601	68.02	67.491	68.952	0					124	59	3	0	0	0	0.87792	1	6047	6047		31.53	4.7337	1	151770			22669	7384	15290	15300	26053	26053					0.02752935445857929
KPDADGSTVLL	11	Unmodified	_KPDADGSTVLL_					0	0	0		ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1	ENSG00000185722|ENST00000341657|ANKFY1	ENSG00000185722|ENST00000341657|ANKFY1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.3024291992188	2	558.300778	1114.587	-0.26997	-0.00015073	1.5057	0.00084064	1.2357	0.00068992	558.3014243316093	27.942	0.60811	27.845	27.576	28.184	-0.096947					26	13	3	0	0	0	0.67778	1	1669	1669		35.152	0.97948	1	158810			22670	7737	15291	15301	26054	26054					0.034293870609417354
KPDQSRAPM	9	Unmodified	_KPDQSRAPM_					0	0	0			REV__nc|ENSG00000174015|Q8NA61-2|CBY2	REV__nc|ENSG00000174015|Q8NA61-2|CBY2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	515.2592163085938	2	515.260933	1028.50731	0.26458	0.00013633	-2.9387	-0.0015142	-2.6741	-0.0013779	515.2591396509968	30.829	0.60144	30.847	30.641	31.242	0.018362					27	17	2	0	0	0	0.68711	1	1619	1619		41.427	0	1	35485	+		22671	21970	15292	15302	26055	26055					-0.005799580940447413
KPDTWVGH	8	Unmodified	_KPDTWVGH_					0	0	0		ENST00000527370.5_1_11:67264693-67266053:-|nuORF	ENST00000527370.5_1_11:67264693-67266053:-|nuORF	ENST00000527370.5_1_11:67264693-67266053:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.241943359375	2	470.237784	938.461016	0.31603	0.00014861	3.4577	0.001626	3.7738	0.0017746	470.2393403680217	50.1	0.57283	50.142	49.725	50.298	0.042236					22	13	2	0	0	0	0.90465	1	3931	3931		40.573	1.7665	1	76630			22672	13285	15293	15303	26056	26056					-0.010676549338199948
KPDTWVGH	8	Unmodified	_KPDTWVGH_					0	0	0		ENST00000527370.5_1_11:67264693-67266053:-|nuORF	ENST00000527370.5_1_11:67264693-67266053:-|nuORF	ENST00000527370.5_1_11:67264693-67266053:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	470.237784	938.461016	-0.69994	-0.00032914	5.214	0.0024518	4.5141	0.0021227	470.2401951054297	50.08	0.21957	50.057	49.944	50.164	-0.02343	0.0099905	0.00075198	NaN	40.573	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15648			22673	13285	15293	15303							-0.010676549338199948
KPDTWVGH	8	Unmodified	_KPDTWVGH_					0	0	0		ENST00000527370.5_1_11:67264693-67266053:-|nuORF	ENST00000527370.5_1_11:67264693-67266053:-|nuORF	ENST00000527370.5_1_11:67264693-67266053:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	470.237784	938.461016	-1.0326	-0.00048558	5.1143	0.0024049	4.0817	0.0019194	470.2400161627026	50.034	0.41762	50.063	49.867	50.285	0.029629	0.016384	0.00065823	NaN	40.573	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77194			22674	13285	15293	15303							-0.010676549338199948
KPDTWVGH	8	Unmodified	_KPDTWVGH_					0	0	0		ENST00000527370.5_1_11:67264693-67266053:-|nuORF	ENST00000527370.5_1_11:67264693-67266053:-|nuORF	ENST00000527370.5_1_11:67264693-67266053:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	470.237784	938.461016	-0.36218	-0.00017031	4.5217	0.0021263	4.1595	0.001956	470.23976880997054	50.018	0.50491	49.926	49.679	50.184	-0.091797	-0.1213	0.00010085	NaN	40.573	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58361			22675	13285	15293	15303							-0.010676549338199948
KPDYLLNTERY	11	Unmodified	_KPDYLLNTERY_					0	0	0			REV__ENSG00000138792|ENST00000265162|ENPEP	REV__ENSG00000138792|ENST00000265162|ENPEP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2554626464844	3	471.245386	1410.71433	-0.53642	-0.00025278	-1.5012	-0.00070741	-2.0376	-0.0009602	471.244400996651	30.746	0.65362	30.75	30.448	31.101	0.0037212					31	14	3	0	0	0	0.17244	1	2008	2008		31.068	2.4914	1	114930	+		22676	19506	15294	15304	26057	26057					0.025401079351240696
KPEGVTEAKHP	11	Unmodified	_KPEGVTEAKHP_					0	0	0		nc|ENSG00000148840|Q5VV67-2|PPRC1;ENSG00000148840|ENST00000278070|PPRC1	nc|ENSG00000148840|Q5VV67-2|PPRC1	nc|ENSG00000148840|Q5VV67-2|PPRC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.8182373046875	2	596.81967	1191.62479	-1.5654	-0.00093426	2.0611	0.0012301	0.49572	0.00029585	596.8202575531822	32.726	0.4758	32.725	32.536	33.012	-0.0016365					19	11	3	0	0	0	0.69248	1	1883	1883		32.751	4.8683	1	70082			22677	4985	15295	15305	26058	26058					0.03663898046397662
KPEQEVPDA	9	Unmodified	_KPEQEVPDA_					0	0	0		nc|ENSG00000132780|P49321-4|NASP;ENSG00000132780|ENST00000350030|NASP;nc|ENSG00000132780|P49321-3|NASP	nc|ENSG00000132780|P49321-4|NASP	nc|ENSG00000132780|P49321-4|NASP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.7530517578125	2	506.750921	1011.48729	2.3756	0.0012038	1.4162	0.00071766	3.7918	0.0019215	506.7515182161224	98.592	3.0666	98.969	97.268	100.33	0.37679					111	75	2	0	0	0	0.71772	1	11980	11980		39.253	0.44669	1	6133500			22678	3827	15296	15306	26059	26059					-0.017994305530010024
KPEVPPRVP	9	Unmodified	_KPEVPPRVP_					0	0	0		ENSG00000116285|ENST00000377482|ERRFI1	ENSG00000116285|ENST00000377482|ERRFI1	ENSG00000116285|ENST00000377482|ERRFI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8035583496094	2	509.805834	1017.59712	-0.23209	-0.00011832	-3.4044	-0.0017356	-3.6365	-0.0018539	509.8040269548471	84.32	2.2366	84.755	83.379	85.615	0.43538					129	54	3	0	0	0	0.69624	1	9899	9899		40.778	7.9657	1	819870			22679	2915	15297	15307	26060	26060					0.08902039576844345
KPFCAVLP	8	Unmodified	_KPFCAVLP_					0	0	0		ENST00000495368.1_1_10:12171786-12184437:+|nuORF;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2	ENST00000495368.1_1_10:12171786-12184437:+|nuORF	ENST00000495368.1_1_10:12171786-12184437:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.7386779785156	2	437.746399	873.478245	0.318	0.0001392	-2.98	-0.0013045	-2.662	-0.0011653	437.7455475520547	22.343	0.65993	21.732	21.25	21.91	-0.6107					21	16	2	0	0	0	0.4196	1	878	878		21.702	0	1	37567			22680	1138	15298	15308	26061	26061					0.036445493476321644
KPFKRFLRKKS	11	Unmodified	_KPFKRFLRKKS_					0	0	0		ENSG00000112562|ENST00000356284|SMOC2;nc|ENSG00000112562|Q9H3U7-2|SMOC2	ENSG00000112562|ENST00000356284|SMOC2	ENSG00000112562|ENST00000356284|SMOC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.30853271484375	3	478.973384	1433.89832	0.1614	7.7307E-05	2.071	0.00099196	2.2324	0.0010693	478.974258997061	46.621	1.762	46.607	45.625	47.387	-0.013821					99	45	3	0	0	0	0.79945	1	3663	3663		11.455	2.6553	1	179760			22681	2669	15299	15309	26062	26062					0.19872965947138255
KPFKVICIYI	10	Unmodified	_KPFKVICIYI_					0	0	0		ENSG00000144227|ENST00000272641|NXPH2;ENSG00000122584|ENST00000405863|NXPH1	ENSG00000144227|ENST00000272641|NXPH2	ENSG00000144227|ENST00000272641|NXPH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.9336853027344	3	408.578872	1222.71479	-1.9391	-0.00079226	0.81745	0.00033399	-1.1216	-0.00045826	408.57883921390317	16.255	0.29923	16.302	16.185	16.484	0.047804					26	13	4	0	0	0	0.37624	1	128	128		28.081	7.2443	1	112090			22682	3234	15300	15310	26063	26063					0.11233856121293684
KPFPSVPQ	8	Unmodified	_KPFPSVPQ_					0	0	0			REV__ENST00000449606.5_1_16:23534653-23534791:-|nuORF	REV__ENST00000449606.5_1_16:23534653-23534791:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2510070800781	2	450.252903	898.491253	-1.4095	-0.00063463	-2.7375	-0.0012326	-4.147	-0.0018672	450.2515003535652	31.411	1.0426	31.49	30.856	31.899	0.079836					49	23	4	0	0	0	0.3646	2	2126	2105;2126		87.754	8.3033	1	1166300	+		22683	26855	15301	15311	26064;26065	26065					0.03794703731375648
KPFTHKSDL	9	Unmodified	_KPFTHKSDL_					0	0	0		ENSG00000204519|ENST00000282296|ZNF551;nc|ENSG00000204519|Q7Z340-2|ZNF551	ENSG00000204519|ENST00000282296|ZNF551	ENSG00000204519|ENST00000282296|ZNF551	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.277099609375	2	536.792924	1071.57129	0.34762	0.0001866	-0.094085	-5.0504E-05	0.25354	0.0001361	537.2949242896	24.581	0.17783	24.253	24.161	24.339	-0.32825					5	3	2	0	0	0	0.20789	1	1183	1183		56.721	17.915	1	36228			22684	8451	15302	15312	26066	26066					0.03837145334568959
KPGAHVKP	8	Unmodified	_KPGAHVKP_					0	0	0		ENSG00000181333|ENST00000315765|HEPHL1	ENSG00000181333|ENST00000315765|HEPHL1	ENSG00000181333|ENST00000315765|HEPHL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.253173828125	2	417.253237	832.491922	-0.040205	-1.6776E-05	-0.42783	-0.00017851	-0.46804	-0.00019529	417.25296314698	35.536	1.154	35.476	35.254	36.408	-0.060333					58	32	2	0	0	0	0.79929	1	1865	1865		18.324	2.6882	1	236350			22685	7382	15303	15313	26067	26067					0.06897543171089637
KPGAKKKI	8	Unmodified	_KPGAKKKI_					0	0	0		ENSG00000183035|ENST00000329312|CYLC1	ENSG00000183035|ENST00000329312|CYLC1	ENSG00000183035|ENST00000329312|CYLC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3002624511719	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.80706	1	7359	7359		19.36	4.6959	1	881780			22686	7496	15304	15314	26068	26068					0.14627262273359065
KPGDKSPLYV	10	Unmodified	_KPGDKSPLYV_					0	0	0			REV__nc|ENSG00000188152|Q5VZR2-2|NUTM2G	REV__nc|ENSG00000188152|Q5VZR2-2|NUTM2G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3065185546875	2	552.308406	1102.60226	-1.4446	-0.00079788	-2.0305	-0.0011215	-3.4752	-0.0019194	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.70553	1	9253	9253		44.377	3.599	1	1677300	+		22687	18923	15305	15315	26069	26069					0.055062986488110255
KPGDLLYFPRG	11	Unmodified	_KPGDLLYFPRG_					0	0	0		nc|ENSG00000170854|Q8IUF8-2|RIOX2;nc|ENSG00000170854|Q8IUF8-4|RIOX2;ENSG00000170854|ENST00000394198|RIOX2	nc|ENSG00000170854|Q8IUF8-2|RIOX2	nc|ENSG00000170854|Q8IUF8-2|RIOX2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.73919677734375	3	421.567912	1261.68191	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.316	1	32.428	31.928	32.928	0.11117								0	0	0	0.56276	1	1514	1514		21.032	1.0355	1				22688	6619	15306	15316	26070	26070					0.06153365322779791
KPGEQKVPLWT	11	Unmodified	_KPGEQKVPLWT_					0	0	0		nc|ENSG00000162897|Q8WWV6-5|FCAMR	nc|ENSG00000162897|Q8WWV6-5|FCAMR	nc|ENSG00000162897|Q8WWV6-5|FCAMR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3617553710938	2	641.861338	1281.70812	1.706	0.001095	-4.3678	-0.0028035	-2.6617	-0.0017085	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.48529	5	12851	12338;12677;12744;12851;12956		52.937	16.49	1	27133000			22689	15046	15307	15317	26071;26072;26073;26074;26075	26074					0.0785363449426768
KPGESAKL	8	Unmodified	_KPGESAKL_					0	0	0			REV__ENSG00000063127|ENST00000335875|SLC6A16	REV__ENSG00000063127|ENST00000335875|SLC6A16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.2451171875	2	415.242535	828.470518	4.5254	0.0018791	0.48844	0.00020282	5.0138	0.0020819	415.2428634068345	107.07	0.82995	107.22	106.81	107.64	0.14929					51	28	3	0	0	0	0.86288	2	13072	13072;13096		26.796	1.3459	1	2111700	+		22690	16468	15308	15318	26076;26077	26076					0.04942113351694388
KPGGIYVVC	9	Unmodified	_KPGGIYVVC_					0	0	0		ENSG00000177363|ENST00000317449|LRRN4CL	ENSG00000177363|ENST00000317449|LRRN4CL	ENSG00000177363|ENST00000317449|LRRN4CL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2547607421875	2	468.254588	934.494624	0.60478	0.00028319	-0.093062	-4.3577E-05	0.51172	0.00023962	468.25441943244317	81.627	3.5592	81.77	80.781	84.34	0.14352					144	82	2	0	0	0	0.78058	1	7783	7783		30.504	0.6621	1	205460			22691	7134	15309	15319	26078	26078					0.024756305137316303
KPGGLVCLTT	10	Unmodified	_KPGGLVCLTT_					0	0	0		ENSG00000165171|ENST00000297873|METTL27	ENSG00000165171|ENST00000297873|METTL27	ENSG00000165171|ENST00000297873|METTL27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7797546386719	2	494.778428	987.542302	-0.075058	-3.7137E-05	3.6992	0.0018303	3.6241	0.0017931	494.7801083626478	84.098	2.6315	84.165	82.573	85.204	0.067001					119	60	3	0	0	0	0.74274	1	8479	8479		42.396	13.247	1	230560			22692	6055	15310	15320	26079	26079					0.048032847138983925
KPGGYGPLR	9	Unmodified	_KPGGYGPLR_					0	0	0			REV__nc|ENSG00000100842|O43281-3|EFS	REV__nc|ENSG00000100842|O43281-3|EFS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7673645019531	2	472.769252	943.52395	-0.10807	-5.1094E-05	-4.0843	-0.0019309	-4.1924	-0.001982	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.78536	1	8526	8526		29.15	4.6455	1	501240	+		22693	29740	15311	15321	26080	26080					0.04992910854218735
KPGHDFLP	8	Unmodified	_KPGHDFLP_					0	0	0		ENST00000597009.5_1_19:43236759-43244536:-|nuORF	ENST00000597009.5_1_19:43236759-43244536:-|nuORF	ENST00000597009.5_1_19:43236759-43244536:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30133056640625	2	455.742702	909.470852	-0.78481	-0.00035767	1.1906	0.0005426	0.40578	0.00018493	455.74433173645076	35.582	0.41003	35.591	35.295	35.705	0.0092773					11	8	2	0	0	0	0.4196	1	2226	2226		33.516	15.191	1	9309.5			22694	14344	15312	15322	26081	26081					0.012495330715751152
KPGHLPHLL	9	Unmodified	_KPGHLPHLL_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2;nc|ENSG00000135749|A6NKB5-4|PCNX2;nc|ENSG00000135749|A6NKB5-3|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.30938720703125	2	506.308544	1010.60253	-0.48862	-0.00024739	4.0679	0.0020596	3.5793	0.0018122	506.3111132700508	55.04	1.6112	55.102	54.659	56.271	0.061703					80	58	2	0	0	0	0.76996	2	4619	4536;4619		33.516	6.7195	1	177360			22695	4049	15313	15323	26082;26083	26083					0.09765763159327889
KPGHLPHLL	9	Unmodified	_KPGHLPHLL_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2;nc|ENSG00000135749|A6NKB5-4|PCNX2;nc|ENSG00000135749|A6NKB5-3|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3072204589844	2	506.308544	1010.60253	-0.11528	-5.8369E-05	1.0679	0.00054071	0.95266	0.00048234	506.30895339856204	46.446	1.9227	46.367	45.268	47.19	-0.079002					66	54	2	0	0	0	0.7932	1	3437	3437		24.203	1.1603	1	167080			22696	4049	15313	15323	26084	26084					0.09765763159327889
KPGKELLPKDA	11	Unmodified	_KPGKELLPKDA_					0	0	0		ENSG00000264006|ENST00000648824|AKR1C8	ENSG00000264006|ENST00000648824|AKR1C8	ENSG00000264006|ENST00000648824|AKR1C8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.85595703125	2	598.355888	1194.69722	1.6651	0.0009963	4.0005	0.0023937	5.6656	0.00339	598.3583175004217	94.283	4.5904	94.715	93.221	97.812	0.4324					199	114	2	0	0	0	0.72739	1	11115	11115		27.047	1.4733	1	27623000			22697	8942	15314	15324	26085	26085					0.10766232120022323
KPGKLDVEPG	10	Unmodified	_KPGKLDVEPG_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2483520507812	2	520.292756	1038.57096	0.064182	3.3393E-05	3.1744	0.0016516	3.2386	0.001685	520.2947043833715	74.459	1.1108	74.85	74.248	75.358	0.3911					42	26	3	0	0	0	0.37624	1	8361	8361		36.447	0	1	312460	+		22698	18623	15315	15325	26086	26086					0.05321725614680872
KPGKVVLAPHL	11	Unmodified	_KPGKVVLAPHL_					0	0	0		ENST00000427953.5_1_1:114466911-114471053:-|nuORF	ENST00000427953.5_1_1:114466911-114471053:-|nuORF	ENST00000427953.5_1_1:114466911-114471053:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	579.8739013671875	2	579.871508	1157.72846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.247	1	22.238	21.738	22.738	-0.0088215								0	0	0	0.56276	1	645	645		34.173	12.213	1				22699	11587	15316	15326	26087	26087					0.15590849944715046
KPGLDQSKNSE	11	Unmodified	_KPGLDQSKNSE_					0	0	0			REV__nc|ENSG00000128881|Q6IQ55-2|TTBK2	REV__nc|ENSG00000128881|Q6IQ55-2|TTBK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	601.8052978515625	2	601.804217	1201.59388	-1.4083	-0.00084753	3.6624	0.0022041	2.2541	0.0013565	601.8062804734025	41.76	0.68602	42.174	41.899	42.585	0.4139					44	17	3	0	0	0	0.48313	1	3694	3694		53.089	7.1167	1	1400600	+		22700	18797	15317	15327	26088	26088					0.001146999415141181
KPGLGKVK	8	Unmodified	_KPGLGKVK_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.779296875	2	413.779088	825.543623	-0.13628	-5.639E-05	1.2148	0.00050267	1.0786	0.00044628	413.77921677117615	29.317	0.86463	29.288	28.997	29.862	-0.029207					39	19	4	0	0	0	0.91005	1	1847	1847		42.474	0	1	209280	+		22701	16566	15318	15328	26089	26089					0.1238728686498689
KPGLIHPI	8	Unmodified	_KPGLIHPI_					0	0	0			REV__ENST00000548322.1_1_14:23424385-23424601:+|nuORF	REV__ENST00000548322.1_1_14:23424385-23424601:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26519775390625	2	437.779088	873.543623	-0.50242	-0.00021995	-3.4313	-0.0015022	-3.9337	-0.0017221	437.7778644557041	26.937	0.17827	26.762	26.658	26.837	-0.17559					5	3	2	0	0	0	0.4196	1	1512	1512		28.254	7.7724	1	14641	+		22702	28568	15319	15329	26090	26090					0.101792868649909
KPGLVELMA	9	Unmodified	_KPGLVELMA_					0	0	0			REV__CON__Q3SX14	REV__CON__Q3SX14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2775573730469	2	479.275521	956.536489	0.53004	0.00025403	3.2196	0.0015431	3.7496	0.0017971	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.76255	1	8472	8472		35.618	2.1027	1	2070000	+	+	22703	16011	15320	15330	26091	26091					0.05648186202256511
KPGLVELMA	9	Unmodified	_KPGLVELMA_					0	0	0			REV__CON__Q3SX14	REV__CON__Q3SX14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27862548828125	2	479.275521	956.536489	0.63867	0.0003061	3.2635	0.0015641	3.9021	0.0018702	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.78536	1	8378	8378		29.15	2.4566	1	6593200	+	+	22704	16011	15320	15330	26092	26092					0.05648186202256511
KPGMQLPLG	9	Unmodified	_KPGMQLPLG_					0	0	0			REV__ENST00000444428.5_3_7:1040118-1094922:-|nuORF	REV__ENST00000444428.5_3_7:1040118-1094922:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.769287109375	2	470.767863	939.521173	-0.68241	-0.00032125	3.1894	0.0015015	2.507	0.0011802	470.7692716154138	50.88	1.3539	50.856	50.427	51.781	-0.02343					91	38	3	0	0	0	0.72402	1	4482	4482		38.806	6.8513	1	670480	+		22705	26373	15321	15331	26093	26093					0.048993194050581224
KPGNKKQP	8	Unmodified	_KPGNKKQP_					0	0	0		nc|ENSG00000119777|Q6NUQ4-2|TMEM214;ENSG00000119777|ENST00000238788|TMEM214;ENST00000495312.1_1_2:27255799-27258254:+|nuORF;ENST00000478980.1_1_2:27256012-27257182:+|nuORF	nc|ENSG00000119777|Q6NUQ4-2|TMEM214	nc|ENSG00000119777|Q6NUQ4-2|TMEM214	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.73663330078125	2	448.769252	895.52395	-0.14425	-6.4736E-05	1.2917	0.00057967	1.1474	0.00051494	448.76919805518196	54.75	0.3779	55.318	55.111	55.489	0.56836					13	8	2	0	0	0	0.4196	1	5602	5602		40.573	10.069	1	64179			22706	3095	15322	15332	26094	26094					0.07200910854226095
KPGNTADRL	9	Unmodified	_KPGNTADRL_					0	0	0			REV__nc|ENSG00000010539|P98182-3|ZNF200	REV__nc|ENSG00000010539|P98182-3|ZNF200	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2663269042969	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.74721	1	8470	8470		37.159	1.5408	1	1182200	+		22707	16167	15323	15333	26095	26095					0.03315401640657001
KPGPLPPNVSA	11	Unmodified	_KPGPLPPNVSA_					0	0	0			REV__ENST00000520771.1_1_8:125565235-125568613:-|nuORF	REV__ENST00000520771.1_1_8:125565235-125568613:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.8069458007812	2	538.808574	1075.60259	0.058912	3.1742E-05	-3.5667	-0.0019218	-3.5078	-0.00189	538.806607108325	90.57	3.5579	90.787	89.308	92.866	0.21737					211	84	4	0	0	0	0.73893	1	9170	9170		24.519	1.4767	1	874780	+		22708	21692	15324	15334	26096	26096					0.06781718368665679
KPGPRKLA	8	Unmodified	_KPGPRKLA_					0	0	0		ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	ENSG00000196872|ENST00000397899|CRACDL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77984619140625	2	433.782162	865.549771	0.28843	0.00012512	-3.8544	-0.001672	-3.566	-0.0015469	433.78110763255734	50.946	4.0891	50.995	50.343	54.432	0.049896					422	122	5	0	0	0	0.81548	2	4466	4416;4466		20.482	3.1169	1	4871400			22709	8109	15325	15335	26097;26098	26098					0.11161805096503485
KPGPVPVPGPT	11	Unmodified	_KPGPVPVPGPT_					0	0	0			REV__ENST00000510863.1_1_4:77028861-77033669:+|nuORF	REV__ENST00000510863.1_1_4:77028861-77033669:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3033447265625	2	523.305667	1044.59678	-0.79828	-0.00041774	-3.1608	-0.0016541	-3.9591	-0.0020718	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.70737	1	8670	8670		30.318	2.2362	1	9288900	+		22710	20474	15326	15336	26099	26099					0.0762661985700106
KPGPVPVPGPT	11	Unmodified	_KPGPVPVPGPT_					0	0	0			REV__ENST00000510863.1_1_4:77028861-77033669:+|nuORF	REV__ENST00000510863.1_1_4:77028861-77033669:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.30322265625	2	523.305667	1044.59678	-0.041393	-2.1661E-05	-4.0495	-0.0021191	-4.0909	-0.0021408	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.62614	1	8637	8637		41.427	4.2675	1	3850300	+		22711	20474	15326	15336	26100	26100					0.0762661985700106
KPGPVPVPGPT	11	Unmodified	_KPGPVPVPGPT_					0	0	0			REV__ENST00000510863.1_1_4:77028861-77033669:+|nuORF	REV__ENST00000510863.1_1_4:77028861-77033669:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3037109375	2	523.305667	1044.59678	-0.041134	-2.1526E-05	-3.7481	-0.0019614	-3.7892	-0.0019829	523.30361738985	91.645	2.4487	91.714	91.431	93.88	0.06987					99	57	2	0	0	0	0.70737	1	9474	9474		30.318	1.1682	1	1067500	+		22712	20474	15326	15336	26101	26101					0.0762661985700106
KPGPVPVPGPT	11	Unmodified	_KPGPVPVPGPT_					0	0	0			REV__ENST00000510863.1_1_4:77028861-77033669:+|nuORF	REV__ENST00000510863.1_1_4:77028861-77033669:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3043212890625	2	523.305667	1044.59678	-0.17027	-8.9103E-05	-3.7085	-0.0019407	-3.8788	-0.0020298	523.3036223327587	91.376	2.6869	91.596	91.26	93.946	0.22013					111	63	2	0	0	0	0.7144	1	9157	9157		29.17	0.020503	1	1188800	+		22713	20474	15326	15336	26102	26102					0.0762661985700106
KPGPVPVPGPT	11	Unmodified	_KPGPVPVPGPT_					0	0	0			REV__ENST00000510863.1_1_4:77028861-77033669:+|nuORF	REV__ENST00000510863.1_1_4:77028861-77033669:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.303466796875	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.67778	2	8811	8751;8811		35.152	4.8343	1	12189000	+		22714	20474	15326	15336	26103;26104	26104					0.0762661985700106
KPGQFIHT	8	Unmodified	_KPGQFIHT_					0	0	0		nc|ENSG00000142657|P52209-2|PGD;ENSG00000142657|ENST00000270776|PGD	nc|ENSG00000142657|P52209-2|PGD	nc|ENSG00000142657|P52209-2|PGD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2546691894531	2	464.255977	926.497401	-1.1813	-0.00054845	-2.9805	-0.0013837	-4.1619	-0.0019322	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.84341	1	8112	8112		24.203	0.68005	1	946850			22715	4578	15327	15337	26105	26105					0.031212219628855564
KPGQFIHT	8	Unmodified	_KPGQFIHT_					0	0	0		nc|ENSG00000142657|P52209-2|PGD;ENSG00000142657|ENST00000270776|PGD	nc|ENSG00000142657|P52209-2|PGD	nc|ENSG00000142657|P52209-2|PGD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25372314453125	2	464.255977	926.497401	-1.0566	-0.00049054	-3.1539	-0.0014642	-4.2105	-0.0019547	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.93786	1	8316	8316		53.351	5.6941	1	1603800			22716	4578	15327	15337	26106	26106					0.031212219628855564
KPGQFIHT	8	Unmodified	_KPGQFIHT_					0	0	0		nc|ENSG00000142657|P52209-2|PGD;ENSG00000142657|ENST00000270776|PGD	nc|ENSG00000142657|P52209-2|PGD	nc|ENSG00000142657|P52209-2|PGD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2541198730469	2	464.255977	926.497401	-0.76573	-0.00035549	-3.3334	-0.0015476	-4.0992	-0.0019031	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.83456	1	9729	9729		60.972	9.6365	1	1046600			22717	4578	15327	15337	26107	26107					0.031212219628855564
KPGQFVFKGDL	11	Unmodified	_KPGQFVFKGDL_					0	0	0		nc|ENSG00000007202|Q14667-2|BLTP2;ENSG00000007202|ENST00000528896|BLTP2	nc|ENSG00000007202|Q14667-2|BLTP2	nc|ENSG00000007202|Q14667-2|BLTP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.346435546875	2	618.342781	1234.67101	0.89263	0.00055195	4.1677	0.002577	5.0603	0.003129	618.3452359789501	97.829	3.1632	97.989	96.92	100.08	0.16073					214	73	4	0	0	0	0.68532	1	10119	10119		33.922	3.6039	1	874220			22718	721	15328	15338	26108	26108					0.0630596294854513
KPGQRIIKL	9	Unmodified	_KPGQRIIKL_					0	0	0			REV__ENSG00000092978|ENST00000366935|GPATCH2	REV__ENSG00000092978|ENST00000366935|GPATCH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.0115966796875	2	526.850576	1051.6866	-0.24788	-0.0001306	-0.25531	-0.00013451	-0.5032	-0.00026511	526.8506826379768	15.372	0.16477	15.421	15.343	15.508	0.04908					6	5	2	0	0	0	0.20789	1	45	45		10.866	0	1	13813	+		22719	17042	15329	15339	26109	26109					0.1628229425621157
KPGRARPGTH	10	Unmodified	_KPGRARPGTH_					0	0	0		ENST00000556438.6_1_14:55604281-55604326:+|nuORF	ENST00000556438.6_1_14:55604281-55604326:+|nuORF	ENST00000556438.6_1_14:55604281-55604326:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.8067626953125	2	538.807231	1075.59991	-0.69163	-0.00037266	-0.29872	-0.00016095	-0.99035	-0.00053361	538.8070299475025	90.865	3.8094	90.865	89.559	93.368	0					216	88	3	0	0	0	0.8545	1	8860	8860		36.447	0.82846	1	563820			22720	13745	15330	15340	26110	26110					0.06513307754357811
KPGSPIIL	8	Unmodified	_KPGSPIIL_					0	0	0		ENSG00000076356|ENST00000367033|PLXNA2	ENSG00000076356|ENST00000367033|PLXNA2	ENSG00000076356|ENST00000367033|PLXNA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.767333984375	2	412.765646	823.516739	1.0742	0.00044338	1.0077	0.00041595	2.0819	0.00085933	412.7659693172007	40.207	1.4192	40.217	39.687	41.106	0.0092812					79	35	3	0	0	0	0.88915	1	2961	2961		35.201	1.6851	1	573960			22721	1356	15331	15341	26111	26111					0.09792178253815109
KPGTLLNAM	9	Unmodified	_KPGTLLNAM_					0	0	0			REV__ENSG00000108828|ENST00000355653|VAT1	REV__ENSG00000108828|ENST00000355653|VAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.76702880859375	2	472.76532	943.516088	-0.10807	-5.1094E-05	4.2312	0.0020003	4.1231	0.0019493	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.71772	1	8328	8328		39.253	4.0521	1	501240	+		22722	17734	15332	15342	26112	26112					0.04207015542442605
KPGVKHAP	8	Unmodified	_KPGVKHAP_					0	0	0		ENSG00000249242|ENST00000449862|TMEM150C;nc|ENSG00000249242|B9EJG8-2|TMEM150C	ENSG00000249242|ENST00000449862|TMEM150C	ENSG00000249242|ENST00000449862|TMEM150C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25299072265625	2	417.253237	832.491922	-1.8869	-0.00078731	0.7017	0.00029279	-1.1852	-0.00049452	417.2534083410249	40.313	0.96051	40.32	40.071	41.032	0.0065002					69	34	3	0	0	0	0.82464	1	2557	2557		21.702	2.3424	1	507760			22723	8836	15333	15343	26113	26113					0.06897543171078269
KPGVMALAN	9	Unmodified	_KPGVMALAN_					0	0	0		ENST00000427559.1_1_2:112698001-112698598:-|nuORF	ENST00000427559.1_1_2:112698001-112698598:-|nuORF	ENST00000427559.1_1_2:112698001-112698598:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.75537109375	2	450.752213	899.489873	0.36741	0.00016561	4.3918	0.0019796	4.7592	0.0021452	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.78058	1	8188	8188		30.504	1.3541	1	394230			22724	11577	15334	15344	26114	26114					0.03610746370952711
KPGVPFEKP	9	Unmodified	_KPGVPFEKP_					0	0	0			REV__ENST00000487863.5_1_19:53056575-53056806:+|nuORF	REV__ENST00000487863.5_1_19:53056575-53056806:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.78515625	2	499.78711	997.559667	0.19483	9.7372E-05	-4.1016	-0.0020499	-3.9068	-0.0019526	499.7848899296981	22.078	1.1524	21.635	21.19	22.342	-0.44324					54	25	4	0	0	0	0.36616	1	851	851		60.118	12.203	1	243250	+		22725	27581	15335	15345	26115	26115					0.06078948311221666
KPGVRVLV	8	Unmodified	_KPGVRVLV_					0	0	0		nc|ENSG00000108018|Q8WY21-4|SORCS1;ENSG00000108018|ENST00000263054|SORCS1;nc|ENSG00000108018|Q8WY21-3|SORCS1;nc|ENSG00000108018|Q8WY21-2|SORCS1	nc|ENSG00000108018|Q8WY21-4|SORCS1	nc|ENSG00000108018|Q8WY21-4|SORCS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2514343261719	2	434.292362	866.570172	0.30137	0.00013088	1.5901	0.00069057	1.8915	0.00082145	434.2922889114502	81.236	0.63876	81.176	80.753	81.392	-0.059692					29	14	3	0	0	0	0.4196	1	8160	8160		18.324	5.3652	1	57175			22726	2387	15336	15346	26116	26116					0.13154975756310705
KPGYGSNQV	9	Unmodified	_KPGYGSNQV_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	475.24761962890625	2	475.240524	948.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.153	1	35.141	34.641	35.641	-0.012203								0	0	0	0.30778	1	2163	2163		27.882	3.6795	1		+		22727	16090	15337	15347	26117	26117					-0.009799761419913011
KPIGAIPKG	9	Unmodified	_KPIGAIPKG_					0	0	0		ENST00000596279.1_1_19:17337742-17339154:+|nuORF;ENST00000594283.5_1_19:17337742-17339731:+|nuORF;ENSG00000099330|ENST00000215061|OCEL1;ENST00000599588.5_1_19:17337742-17339107:+|nuORF	ENST00000596279.1_1_19:17337742-17339154:+|nuORF	ENST00000596279.1_1_19:17337742-17339154:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7880859375	2	440.78437	879.554188	-1.696	-0.00074758	-4.3832	-0.0019321	-6.0793	-0.0026796	440.7806757461855	52.571	1.9055	52.571	51.698	53.604	0					138	52	4	0	0	0	0.76764	2	4302	4302;4307		34.173	1.0861	1	195220			22728	1756	15338	15348	26118;26119	26118					0.10959269519412373
KPIISKSMA	9	Unmodified	_KPIISKSMA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.79058837890625	2	487.788795	973.563038	-0.70733	-0.00034503	4.3989	0.0021457	3.6915	0.0018007	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.76255	1	8030	8030		35.618	5.7767	1	2348200			22729	15012	15339	15349	26120	26120					0.0751987509358969
KPIPTIRWLK	10	Unmodified	_KPIPTIRWLK_					0	0	0		ENSG00000018236|ENST00000551295|CNTN1;nc|ENSG00000018236|Q12860-2|CNTN1;nc|ENSG00000018236|Q12860-3|CNTN1	ENSG00000018236|ENST00000551295|CNTN1	ENSG00000018236|ENST00000551295|CNTN1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3836669921875	2	626.400433	1250.78631	-1.2034	-0.00075383	-3.0332	-0.0019	-4.2367	-0.0026538	626.3982086367059	112.14	0.57061	112.12	111.85	112.42	-0.01989					30	19	3	0	0	0	0.37624	1	11958	11958		6.3127	0	1	1761000			22730	831	15340	15350	26121	26121					0.17095111870162327
KPIPTLEPALA	11	Unmodified	_KPIPTLEPALA_					0	0	0		ENSG00000105278|ENST00000262961|ZFR2	ENSG00000105278|ENST00000262961|ZFR2	ENSG00000105278|ENST00000262961|ZFR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.3453369140625	2	575.347532	1148.68051	0.61456	0.00035358	-3.9136	-0.0022517	-3.299	-0.0018981	575.3451796941858	98.405	2.0882	98.633	98.17	100.26	0.22787					146	48	5	0	0	0	0.70737	1	10271	10271		30.318	7.2752	1	2884500			22731	2198	15341	15351	26122	26122					0.11211731234061517
KPIQLHGS	8	Unmodified	_KPIQLHGS_					0	0	0			REV__ENSG00000164236|ENST00000296657|ANKRD33B	REV__ENSG00000164236|ENST00000296657|ANKRD33B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.25494384765625	2	440.255977	878.497401	0.51138	0.00022514	-2.0024	-0.00088159	-1.4911	-0.00065645	440.25489743001594	75.264	0.75718	75.396	75.11	75.867	0.13207					35	20	3	0	0	0	0.88915	1	7001	7001		35.201	1.6851	1	111060	+		22732	21054	15342	15352	26123	26123					0.05329221962892916
KPIQSLPN	8	Unmodified	_KPIQSLPN_					0	0	0		nc|ENSG00000113790|Q08426-2|EHHADH;ENSG00000113790|ENST00000231887|EHHADH	nc|ENSG00000113790|Q08426-2|EHHADH	nc|ENSG00000113790|Q08426-2|EHHADH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3065185546875	2	448.763635	895.512717	0.086005	3.8596E-05	0.031515	1.4143E-05	0.11752	5.2739E-05	448.7634006335015	21.031	0.68472	20.403	19.901	20.586	-0.62835					28	17	2	0	0	0	0.4196	1	723	723		19.997	0	1	37288			22733	2745	15343	15353	26124	26124					0.06078088760079936
KPIRDQHVKPK	11	Unmodified	_KPIRDQHVKPK_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3066711425781	3	449.273611	1344.799	1.0236	0.00045986	-4.4852	-0.0020151	-3.4617	-0.0015552	449.2705758873956	23.388	0.21428	22.814	22.705	22.92	-0.57415					6	4	2	0	0	0	0.17586	1	1041	1041		16.53	0	1	23367			22734	5333	15344	15354	26125	26125					0.14039523262385956
KPIVVVGR	8	Unmodified	_KPIVVVGR_					0	0	0			REV__nc|ENSG00000122787|P51857-3|AKR1D1	REV__nc|ENSG00000122787|P51857-3|AKR1D1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2513427734375	2	434.292362	866.570172	-1.5434	-0.00067029	1.9198	0.00083376	0.37641	0.00016347	434.29299496338	80.01	1.0702	80.109	79.522	80.592	0.098694					73	36	3	0	0	0	0.4196	1	7613	7613		3.41	0	1	320580	+		22735	18517	15345	15355	26126	26126					0.13154975756322074
KPKALSIIRPS	11	Unmodified	_KPKALSIIRPS_					0	0	0			REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2	REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.92950439453125	3	403.92744	1208.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.327	1	48.365	47.865	48.865	0.037731								0	0	0	0.56276	1	3675	3675		17.722	6.0856	1		+		22736	17549	15346	15356	26127	26127					0.16446217627890292
KPKAPHLNA	9	Unmodified	_KPKAPHLNA_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7322692871094	2	488.290351	974.566149	0.26492	0.00012936	-1.9029	-0.00092918	-1.638	-0.00079982	488.2892679155867	55.723	0.57121	56.283	55.941	56.512	0.55954					23	14	2	0	0	0	0.20789	1	5696	5696		38.806	1.647	1	797640	+		22737	23882	15347	15357	26128	26128					0.0778488626260696
KPKAVKPK	8	Unmodified	_KPKAVKPK_					0	0	0		ENSG00000184357|ENST00000331442|H1-5	ENSG00000184357|ENST00000331442|H1-5	ENSG00000184357|ENST00000331442|H1-5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3067321777344	2	448.308013	894.601472	0.78514	0.00035198	-3.786	-0.0016973	-3.0008	-0.0013453	448.30619684466785	23.308	1.6905	22.734	21.403	23.094	-0.57415					81	41	2	0	0	0	0.87479	1	1029	1029		30.504	6.3009	1	470240			22738	7602	15348	15358	26129	26129					0.1499554879040943
KPKCLLQAPIP	11	Unmodified	_KPKCLLQAPIP_					0	0	0		nc|ENSG00000134028|O15204-2|ADAMDEC1;ENSG00000134028|ENST00000256412|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	nc|ENSG00000134028|O15204-2|ADAMDEC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3694458007812	2	604.365201	1206.71585	-1.2751	-0.00077064	4.1148	0.0024869	2.8397	0.0017162	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.75921	1	12884	12884		19.997	5.8596	1	3346600			22739	3907	15349	15359	26130	26130					0.12076070490184065
KPKDAAGLEC	10	Unmodified	_KPKDAAGLEC_					0	0	0		nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT;ENST00000460194.1_1_7:100482600-100483069:+|nuORF	nc|ENSG00000087087|Q9BXP5-4|SRRT	nc|ENSG00000087087|Q9BXP5-4|SRRT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.26220703125	2	516.263142	1030.51173	-0.4165	-0.00021502	-1.2229	-0.00063132	-1.6394	-0.00084634	516.2624531005267	69.383	0.39259	69.346	69.107	69.499	-0.036964					28	20	2	0	0	0	0.82886	1	6710	6710		37.812	2.1932	1	77348			22740	1566	15350	15360	26131	26131					-0.0023049367111980246
KPKFCKVHK	9	Unmodified	_KPKFCKVHK_					0	0	0		ENST00000452400.6_1_8:71024612-71024843:-|nuORF	ENST00000452400.6_1_8:71024612-71024843:-|nuORF	ENST00000452400.6_1_8:71024612-71024843:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.8321533203125	2	557.831329	1113.6481	0.10262	5.7246E-05	2.3649	0.0013192	2.4675	0.0013765	557.832372630094	20.547	0.44965	20.477	20.266	20.715	-0.069735					37	19	3	0	0	0	0.7932	1	546	546		24.203	4.8428	1	74365			22741	11919	15351	15361	26132	26132					0.0958266535005805
KPKHRRLRGG	10	Unmodified	_KPKHRRLRGG_					0	0	0		nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4;ENSG00000262576|ENST00000571252|PCDHGA4	nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4	nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.328369140625	2	602.878522	1203.74249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.99	1	116.93	116.43	117.43	-0.064972								0	0	0	0.45132	1	14000	14000		10.265	1.5716	1				22742	8933	15352	15362	26133	26133					0.14876940216367984
KPKKERFNIN	10	Unmodified	_KPKKERFNIN_					0	0	0			REV__ENSG00000071894|ENST00000616140|CPSF1	REV__ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	637.36865234375	2	637.372404	1272.73025	-1.1676	-0.00074419	-1.729	-0.001102	-2.8965	-0.0018462	637.3712208846088	105.62	2.2472	105.69	104.93	107.17	0.07312					175	54	4	0	0	0	0.8486	1	11184	11184		18.262	0.79408	1	2485300	+		22743	16630	15353	15363	26134	26134					0.10479858962708022
KPKKQSIKKQ	10	Unmodified	_KPKKQSIKKQ_					0	0	0			REV__ENST00000249837.7_1_15:62315662-62325699:-|nuORF	REV__ENST00000249837.7_1_15:62315662-62325699:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.2486877441406	3	404.931073	1211.77139	1.1916	0.00048253	-0.96695	-0.00039155	0.2247	9.0986E-05	404.9305843445769	23.826	0.71997	23.252	22.878	23.598	-0.57415					25	16	2	0	0	0	0.37624	1	1103	1103		33.039	6.976	1	114100	+		22744	24280	15354	15364	26135	26135					0.17397620002179792
KPKKSLERRK	10	Unmodified	_KPKKSLERRK_					0	0	0		nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;ENSG00000061273|ENST00000080059|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7	nc|ENSG00000061273|Q8WUI4-3|HDAC7	nc|ENSG00000061273|Q8WUI4-3|HDAC7	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	635.412109375	2	635.409321	1268.80409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.873	1	15.932	15.432	16.432	0.058631								0	0	0	0.45132	1	86	86		26.693	6.6961	1				22745	1072	15355	15365	26136	26136					0.18043827125006828
KPKLERIIEV	10	Unmodified	_KPKLERIIEV_					0	0	0		ENSG00000151150|ENST00000280772|ANK3	ENSG00000151150|ENST00000280772|ANK3	ENSG00000151150|ENST00000280772|ANK3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	409.8010559082031	3	408.927329	1223.76016	0.012697	5.1922E-06	-2.2783	-0.00093166	-2.2656	-0.00092647	409.2622703931908	18.784	0.1233	18.85	18.797	18.921	0.066296					6	5	2	0	0	0	0.37624	1	374	374		12.957	0	1	33745			22746	5098	15356	15366	26137	26137					0.15722797908028951
KPKLGRAV	8	Unmodified	_KPKLGRAV_					0	0	0			REV__ENST00000360403.6_1_1:45316663-45323405:-|nuORF	REV__ENST00000360403.6_1_1:45316663-45323405:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.78033447265625	2	434.789987	867.565421	0.365	0.0001587	1.026	0.0004461	1.391	0.0006048	434.79041558561613	36.25	0.21076	36.531	36.47	36.681	0.28173					8	4	2	0	0	0	0.4196	1	2839	2839		18.324	6.8134	1	61037	+		22747	25478	15357	15367	26138	26138					0.12634091613551846
KPKLKEQPL	9	Unmodified	_KPKLKEQPL_					0	0	0			REV__ENST00000483153.1_1_1:110257451-110260045:+|nuORF	REV__ENST00000483153.1_1_1:110257451-110260045:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.308837890625	2	540.842416	1079.67028	0.60829	0.00032899	-1.0504	-0.00056808	-0.44208	-0.00023909	540.8420660057997	74.75	0.44427	74.882	74.733	75.177	0.13208					18	12	2	0	0	0	0.20789	1	6925	6925		29.15	9.1528	1	70720	+		22748	27482	15358	15368	26139	26139					0.13363168299474637
KPKLKEQPL	9	Unmodified	_KPKLKEQPL_					0	0	0			REV__ENST00000483153.1_1_1:110257451-110260045:+|nuORF	REV__ENST00000483153.1_1_1:110257451-110260045:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	540.842416	1079.67028	-0.90766	-0.0004909	0.70657	0.00038214	-0.20109	-0.00010876	540.8429256996864	75.349	0.42502	75.349	75.155	75.58	0	0.2794	0.0013154	NaN	29.15	16	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55162	+		22749	27482	15358	15368							0.13363168299474637
KPKLKEQPL	9	Unmodified	_KPKLKEQPL_					0	0	0			REV__ENST00000483153.1_1_1:110257451-110260045:+|nuORF	REV__ENST00000483153.1_1_1:110257451-110260045:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	540.842416	1079.67028	-0.21878	-0.00011832	-0.29457	-0.00015932	-0.51335	-0.00027764	540.842461820454	75.131	0.48597	75.177	74.948	75.434	0.045959	0.1073	0.00023246	NaN	29.15	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101920	+		22750	27482	15358	15368							0.13363168299474637
KPKLLRLAL	9	Unmodified	_KPKLLRLAL_					0	0	0			REV__ENST00000379160.3_1_20:5100338-5107184:-|nuORF	REV__ENST00000379160.3_1_20:5100338-5107184:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3175048828125	2	526.371144	1050.72774	2.3938	0.00126	0.029211	1.5376E-05	2.423	0.0012754	526.3711086045781	105.58	0.45331	105.73	105.51	105.97	0.15583					14	10	2	0	0	0	0.20789	1	12839	12839		12.207	1.3413	1	44496	+		22751	25912	15359	15369	26140	26140					0.204400552956713
KPKLRLRNTS	10	Unmodified	_KPKLRLRNTS_					0	0	0		ENST00000445020.1_1_6:73696704-73697142:+|nuORF	ENST00000445020.1_1_6:73696704-73697142:+|nuORF	ENST00000445020.1_1_6:73696704-73697142:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.25653076171875	3	404.922689	1211.74624	-0.36148	-0.00014637	0.96527	0.00039086	0.60379	0.00024449	404.9229767423174	26.33	2.0851	26.291	25.89	27.975	-0.038523					105	48	5	0	0	0	0.8573	1	1233	1233		16.007	0.086121	1	394560			22752	11817	15360	15370	26141	26141					0.14883565199579607
KPKLTELGEG	10	Unmodified	_KPKLTELGEG_					0	0	0		ENST00000299638.7_2_15:58007640-58007844:+|nuORF	ENST00000299638.7_2_15:58007640-58007844:+|nuORF	ENST00000299638.7_2_15:58007640-58007844:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.1668090820312	2	536.305864	1070.59717	0.70791	0.00037966	-1.5758	-0.00084512	-0.8679	-0.00046546	536.8067164940713	26.047	0.10674	26.071	26.025	26.132	0.024021					6	4	2	0	0	0	0.37624	1	974	974		16.007	0	1	17110			22753	9783	15361	15371	26142	26142					0.06469994786198185
KPKQPWHLTQ	10	Unmodified	_KPKQPWHLTQ_					0	0	0		ENSG00000159208|ENST00000290363|CIART	ENSG00000159208|ENST00000290363|CIART	ENSG00000159208|ENST00000290363|CIART	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.890869140625	3	421.571657	1261.69314	0.22184	9.3522E-05	0.49433	0.0002084	0.71617	0.00030192	421.5722985685216	28.961	0.093597	28.983	28.918	29.012	0.021948					6	4	2	0	0	0	0.37624	1	1206	1206		3.4087	0	1	38557			22754	5516	15362	15372	26143	26143					0.07276187416937319
KPKRKERKR	9	Unmodified	_KPKRKERKR_					0	0	0			REV__chr19:40750937-40751387|62|29.68|0.99|4.9|+|ENST00000597353|SNRPA,SNRPA	REV__chr19:40750937-40751387|62|29.68|0.99|4.9|+|ENST00000597353|SNRPA,SNRPA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.8790893554688	2	613.40183	1224.78911	0.30906	0.00018958	-0.40575	-0.00024889	-0.096693	-5.9312E-05	613.4001536009835	104.65	0.19798	104.69	104.55	104.75	0.039856					6	4	2	0	0	0	0.20789	1	11399	11399		15.642	0	1	127260	+		22755	15703	15363	15373	26144	26144					0.1857038004768583
KPKRKKIISH	10	Unmodified	_KPKRKKIISH_					0	0	0		ENST00000504693.2_1_4:116550597-116550759:+|nuORF	ENST00000504693.2_1_4:116550597-116550759:+|nuORF	ENST00000504693.2_1_4:116550597-116550759:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.76708984375	3	412.275063	1233.80336	-1.9101	-0.00078748	-2.1772	-0.0008976	-4.0873	-0.0016851	412.2741410209593	37.975	1.0979	37.975	37.633	38.73	0					70	26	3	0	0	0	0.37624	1	2300	2300		6.6596	0	1	148900			22756	12909	15364	15374	26145	26145					0.19581032476003202
KPKRKKIISH	10	Unmodified	_KPKRKKIISH_					0	0	0		ENST00000504693.2_1_4:116550597-116550759:+|nuORF	ENST00000504693.2_1_4:116550597-116550759:+|nuORF	ENST00000504693.2_1_4:116550597-116550759:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7669677734375	3	412.275063	1233.80336	0.019898	8.2033E-06	-4.2382	-0.0017473	-4.2183	-0.0017391	412.27332034481674	38.365	1.3269	38.337	38.039	39.366	-0.027843					70	30	3	0	0	0	0.37624	1	2569	2569		7.0187	5.2624	1	141670			22757	12909	15364	15374	26146	26146					0.19581032476003202
KPKRKKIISH	10	Unmodified	_KPKRKKIISH_					0	0	0		ENST00000504693.2_1_4:116550597-116550759:+|nuORF	ENST00000504693.2_1_4:116550597-116550759:+|nuORF	ENST00000504693.2_1_4:116550597-116550759:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2676696777344	3	412.275063	1233.80336	-1.362	-0.00056152	-2.5864	-0.0010663	-3.9484	-0.0016278	412.274081906563	39.86	0.93513	39.816	39.204	40.139	-0.043694					35	21	2	0	0	0	0.37624	1	2813	2813		4.0829	0	1	62197			22758	12909	15364	15374	26147	26147					0.19581032476003202
KPKRKKIISH	10	Unmodified	_KPKRKKIISH_					0	0	0		ENST00000504693.2_1_4:116550597-116550759:+|nuORF	ENST00000504693.2_1_4:116550597-116550759:+|nuORF	ENST00000504693.2_1_4:116550597-116550759:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7666931152344	3	412.275063	1233.80336	-1.2017	-0.00049543	-3.3056	-0.0013628	-4.5073	-0.0018582	412.2736126312887	42.412	0.56673	42.373	42.103	42.669	-0.038223					20	13	2	0	0	0	0.37624	1	3227	3227		10.587	0	1	66795			22759	12909	15364	15374	26148	26148					0.19581032476003202
KPKRREFGVTQ	11	Unmodified	_KPKRREFGVTQ_					0	0	0		ENST00000590160.1_1_19:44531601-44535153:+|nuORF	ENST00000590160.1_1_19:44531601-44535153:+|nuORF	ENST00000590160.1_1_19:44531601-44535153:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.7510681152344	3	449.261482	1344.76262	1.2891	0.00057913	0.89653	0.00040278	2.1856	0.00098191	449.2631646014708	27.729	0.21917	27.474	27.368	27.587	-0.25465					6	4	2	0	0	0	0.17882	1	1626	1626		11.455	2.2428	1	19754			22760	14253	15365	15375	26149	26149					0.10402646365696455
KPKSGPKP	8	Unmodified	_KPKSGPKP_					0	0	0			REV__ENST00000529541.1_1_11:13631944-13632271:-|nuORF	REV__ENST00000529541.1_1_11:13631944-13632271:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.77471923828125	2	419.760895	837.507237	-1.8458	-0.00077479	-3.9423	-0.0016548	-5.7881	-0.0024296	419.75883037418885	42.477	0.44886	42.477	42.266	42.715	0					17	11	2	0	0	0	0.4196	1	2948	2948		27.882	2.4321	1	191400	+		22761	28269	15366	15376	26150	26150					0.0819840996828134
KPKSLAAC	8	Unmodified	_KPKSLAAC_					0	0	0			REV__ENSG00000087116|ENST00000251582|ADAMTS2	REV__ENSG00000087116|ENST00000251582|ADAMTS2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	410.2181701660156	2	409.233656	816.452759	-0.40524	-0.00016584	-4.4153	-0.0018069	-4.8206	-0.0019727	409.2308042703515	16.741	0.17413	16.662	16.552	16.726	-0.079056					8	6	2	0	0	0	0.4196	1	152	152		20.482	8.275	1	16343	+		22762	16924	15367	15377	26151	26151					0.03719074825187363
KPKSRTYLKP	10	Unmodified	_KPKSRTYLKP_					0	0	0			REV__nc|ENSG00000169607|Q8IYA6-3|CKAP2L	REV__nc|ENSG00000169607|Q8IYA6-3|CKAP2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.58306884765625	3	406.583674	1216.72919	-1.927	-0.00078348	2.7576	0.0011212	0.83063	0.00033772	406.58477414221215	112.11	0.72639	112.09	111.83	112.55	-0.01989					36	23	2	0	0	0	0.85259	1	11972	11972		20.03	1.4994	1	4313100	+		22763	21590	15368	15378	26152	26152					0.1294964459377752
KPKSSFDKFLI	11	Unmodified	_KPKSSFDKFLI_					0	0	0			REV__ENST00000282120.6_1_2:85549189-85549318:-|nuORF	REV__ENST00000282120.6_1_2:85549189-85549318:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.25689697265625	3	437.255334	1308.74417	2.3979	0.0010485	2.1136	0.0009242	4.5115	0.0019727	437.25617297786823	99.22	2.8692	99.166	98.246	101.11	-0.053734					176	66	3	0	0	0	0.72892	1	10817	10817		26.75	3.3718	1	988170	+		22764	24611	15369	15379	26153	26153					0.10215091671148002
KPKSSFDKFLI	11	Unmodified	_KPKSSFDKFLI_					0	0	0			REV__ENST00000282120.6_1_2:85549189-85549318:-|nuORF	REV__ENST00000282120.6_1_2:85549189-85549318:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2567138671875	3	437.255334	1308.74417	2.1229	0.00092824	2.3569	0.0010306	4.4797	0.0019588	437.2563089738452	99.067	2.7047	99.115	98.232	100.94	0.048157					189	62	4	0	0	0	0.71803	3	10711	10661;10685;10711		28.577	4.3449	1	798600	+		22765	24611	15369	15379	26154;26155;26156	26156					0.10215091671148002
KPKSSFDKFLI	11	Unmodified	_KPKSSFDKFLI_					0	0	0			REV__ENST00000282120.6_1_2:85549189-85549318:-|nuORF	REV__ENST00000282120.6_1_2:85549189-85549318:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.25714111328125	3	437.255334	1308.74417	0.72446	0.00031677	3.8859	0.0016991	4.6103	0.0020159	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.72892	1	10369	10369		26.75	4.1701	1	670840	+		22766	24611	15369	15379	26157	26157					0.10215091671148002
KPKTQWKFF	9	Unmodified	_KPKTQWKFF_					0	0	0			REV__ENSG00000087365|ENST00000322535|SF3B2	REV__ENSG00000087365|ENST00000322535|SF3B2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.8934631347656	3	403.897481	1208.67061	-1.9337	-0.00078101	-4.1192	-0.0016637	-6.0529	-0.0024447	403.89572816951636	23.091	0.32196	23.143	22.897	23.219	0.05291					27	16	2	0	0	0	0.7932	1	724	724		24.519	0.28737	1	36055	+		22767	16934	15370	15380	26158	26158					0.0746258801930253
KPKTQWKFF	9	Unmodified	_KPKTQWKFF_					0	0	0			REV__ENSG00000087365|ENST00000322535|SF3B2	REV__ENSG00000087365|ENST00000322535|SF3B2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	403.897481	1208.67061	-0.37838	-0.00015283	-9.2826	-0.0037492	-9.661	-0.0039021	403.8936642653778	23.496	0.072329	23.444	23.415	23.487	-0.052114	0.1504	-0.0045521	NaN	24.519	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8636.9	+		22768	16934	15370	15380							0.0746258801930253
KPKYLQPTD	9	Unmodified	_KPKYLQPTD_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|72|1|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|72|1|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|72|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.4944458007812	2	545.300581	1088.58661	-1.6601	-0.00090526	-0.55331	-0.00030172	-2.2134	-0.001207	545.3002392936108	43.183	0.44719	43.616	43.419	43.867	0.4334					17	10	2	0	0	0	0.20789	1	3872	3872		34.173	0	1	469360			22769	14630	15371	15381	26159	26159					0.0458601213174461
KPLAGQLF	8	Unmodified	_KPLAGQLF_					0	0	0			REV__ENST00000558036.5_1_15:101826635-101826689:-|nuORF	REV__ENST00000558036.5_1_15:101826635-101826689:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2660827636719	2	437.263271	872.511988	1.7622	0.00077054	3.9045	0.0017073	5.6667	0.0024778	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.85277	1	1010	1010		25.45	0	1	1079000	+		22770	18786	15372	15382	26160	26160					0.07063294111026153
KPLAPGRH	8	Unmodified	_KPLAPGRH_					0	0	0			REV__chr13:87672825-87675381|28|19.89|0.2|6.63|+|ENST00000325089|SLITRK5,SLITRK5	REV__chr13:87672825-87675381|28|19.89|0.2|6.63|+|ENST00000325089|SLITRK5,SLITRK5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.262939453125	2	438.264136	874.51372	0.23628	0.00010355	-2.5171	-0.0011032	-2.2808	-0.00099961	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.86288	1	3338	3338		26.796	2.5934	1	5350400	+		22771	15581	15373	15383	26161	26161					0.07144347919654592
KPLARLHKNS	10	Unmodified	_KPLARLHKNS_					0	0	0			REV__nc|ENSG00000187122|O75093-2|SLIT1	REV__nc|ENSG00000187122|O75093-2|SLIT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353515625	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.8505	1	12561	12561		19.104	0	1	3937500	+		22772	22905	15374	15384	26162	26162					0.11863607136797327
KPLEPHLHS	9	Unmodified	_KPLEPHLHS_					0	0	0			REV__ENSG00000198173|ENST00000358047|FAM47C	REV__ENSG00000198173|ENST00000358047|FAM47C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.8236083984375	2	529.293091	1056.57163	0.20488	0.00010844	-2.1079	-0.0011157	-1.903	-0.0010073	529.2918106819253	30.554	0.43654	30.557	30.316	30.753	0.0037212					13	9	2	0	0	0	0.20789	1	2015	2015		14.865	0	1	57537	+		22773	23304	15375	15385	26163	26163					0.04560565054430299
KPLFGIRGRKH	11	Unmodified	_KPLFGIRGRKH_					0	0	0			REV__ENST00000529970.5_1_11:120278459-120348246:+|nuORF	REV__ENST00000529970.5_1_11:120278459-120348246:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.9409484863281	3	436.938562	1307.79386	0.28446	0.00012429	2.2669	0.00099051	2.5514	0.0011148	436.9395498414308	52.325	1.2402	52.993	52.715	53.955	0.66729					61	29	3	0	0	0	0.76579	1	5266	5266		18.531	1.3643	1	777610	+		22774	23180	15376	15386	26164	26164					0.15227264190434653
KPLHQGTV	8	Unmodified	_KPLHQGTV_					0	0	0			REV__ENSG00000104213|ENST00000251630|PDGFRL	REV__ENSG00000104213|ENST00000251630|PDGFRL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.25543212890625	2	440.255977	878.497401	0.21701	9.5541E-05	-1.6036	-0.00070598	-1.3865	-0.00061044	440.25507534354267	73.683	0.57788	74.242	73.965	74.543	0.55891					35	15	3	0	0	0	0.84341	1	8314	8314		24.203	1.166	1	792040	+		22775	17442	15377	15387	26165	26165					0.05329221962892916
KPLHSLPG	8	Unmodified	_KPLHSLPG_					0	0	0			REV__ENST00000249014.4_2_22:37965065-37965389:+|nuORF	REV__ENST00000249014.4_2_22:37965065-37965389:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.75225830078125	2	424.75307	847.491587	0.68659	0.00029163	-1.8987	-0.00080646	-1.2121	-0.00051483	424.75214856371434	66.819	1.0126	67.204	66.547	67.559	0.38515					56	29	3	0	0	0	0.84341	3	7301	7291;7301;7312		30.504	5.0535	1	372660	+		22776	24273	15378	15388	26166;26167;26168	26167					0.06174123451228297
KPLHSLPG	8	Unmodified	_KPLHSLPG_					0	0	0			REV__ENST00000249014.4_2_22:37965065-37965389:+|nuORF	REV__ENST00000249014.4_2_22:37965065-37965389:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.7524719238281	2	424.75307	847.491587	0.12148	5.16E-05	-1.3322	-0.00056587	-1.2107	-0.00051427	424.75237083509853	66.591	1.0467	67.142	66.525	67.572	0.55071					64	32	3	0	0	0	0.7961	1	7290	7290		17.365	0	1	363930	+		22777	24273	15378	15388	26169	26169					0.06174123451228297
KPLIRRKI	8	Unmodified	_KPLIRRKI_					0	0	0			REV__chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	REV__chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.360107421875	2	512.361111	1022.70767	-0.052808	-2.7057E-05	0.34006	0.00017423	0.28725	0.00014718	512.3611914628581	74.266	1.3455	74.309	74.086	75.431	0.0429					113	47	3	0	0	0	0.85277	1	7191	7191		25.45	3.4903	1	281850	+		22778	15757	15379	15389	26170	26170					0.1972230435574147
KPLIRRKI	8	Unmodified	_KPLIRRKI_					0	0	0			REV__chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	REV__chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.3610229492188	2	512.361111	1022.70767	-0.13841	-7.0915E-05	0.35065	0.00017966	0.21225	0.00010875	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.86294	1	7318	7318		8.8223	0.59103	1	293160	+		22779	15757	15379	15389	26171	26171					0.1972230435574147
KPLIRRKI	8	Unmodified	_KPLIRRKI_					0	0	0			REV__chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	REV__chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.3610229492188	2	512.361111	1022.70767	-0.36988	-0.00018951	0.50559	0.00025904	0.13571	6.9531E-05	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.81548	1	7229	7229		20.482	6.7065	1	304520	+		22780	15757	15379	15389	26172	26172					0.1972230435574147
KPLKAPPK	8	Unmodified	_KPLKAPPK_					0	0	0			REV__ENST00000596242.5_1_19:4325153-4327208:-|nuORF	REV__ENST00000596242.5_1_19:4325153-4327208:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2471618652344	2	439.794738	877.574923	0.26709	0.00011747	-3.3118	-0.0014565	-3.0447	-0.001339	439.79317730929114	23.398	0.82636	23.016	22.539	23.365	-0.38178					25	19	2	0	0	0	0.4196	1	1074	1074		50.025	23.228	1	37549	+		22781	22252	15380	15390	26173	26173					0.1312385989907625
KPLKEAHG	8	Unmodified	_KPLKEAHG_					0	0	0		ENSG00000112294|ENST00000357578|ALDH5A1;nc|ENSG00000112294|P51649-2|ALDH5A1	ENSG00000112294|ENST00000357578|ALDH5A1	ENSG00000112294|ENST00000357578|ALDH5A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2559509277344	2	440.255977	878.497401	0.50631	0.00022291	-2.2501	-0.00099062	-1.7438	-0.00076771	440.25485411219586	74.795	0.5397	74.927	74.604	75.144	0.13207					27	15	2	0	0	0	0.89457	1	6934	6934		37.028	3.5129	1	100620			22782	2652	15381	15391	26174	26174					0.05329221962892916
KPLKEAHG	8	Unmodified	_KPLKEAHG_					0	0	0		ENSG00000112294|ENST00000357578|ALDH5A1;nc|ENSG00000112294|P51649-2|ALDH5A1	ENSG00000112294|ENST00000357578|ALDH5A1	ENSG00000112294|ENST00000357578|ALDH5A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2554626464844	2	440.255977	878.497401	-1.3621	-0.00059965	-0.24771	-0.00010906	-1.6098	-0.00070871	440.25581826564206	75.456	0.61463	75.544	75.272	75.886	0.087631					27	15	3	0	0	0	0.9159	1	6988	6988		44.531	7.5026	1	108430			22783	2652	15381	15391	26175	26175					0.05329221962892916
KPLKKQSWAGA	11	Unmodified	_KPLKKQSWAGA_					0	0	0		ENST00000306862.6_1_5:43509473-43515035:-|nuORF	ENST00000306862.6_1_5:43509473-43515035:-|nuORF	ENST00000306862.6_1_5:43509473-43515035:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.2415466308594	3	405.239907	1212.69789	2.8569	0.0011577	-1.9282	-0.00078139	0.92871	0.00037635	405.2390473180589	103.36	0.5413	103.59	103.42	103.96	0.22556					22	12	2	0	0	0	0.67762	1	12555	12555		35.178	4.6094	1	942410			22784	9865	15382	15392	26176	26176					0.10005071559703538
KPLKKQSWAGA	11	Unmodified	_KPLKKQSWAGA_					0	0	0		ENST00000306862.6_1_5:43509473-43515035:-|nuORF	ENST00000306862.6_1_5:43509473-43515035:-|nuORF	ENST00000306862.6_1_5:43509473-43515035:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	405.239907	1212.69789	-0.96174	-0.00038973	2.5543	0.0010351	1.5925	0.00064536	405.24102531010686	103.69	0.23637	103.69	103.56	103.8	0	0.0514	0.004771	NaN	35.178	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99444			22785	9865	15382	15392							0.10005071559703538
KPLKKYLLL	9	Unmodified	_KPLKKYLLL_					0	0	0		ENSG00000065320|ENST00000173229|NTN1	ENSG00000065320|ENST00000173229|NTN1	ENSG00000065320|ENST00000173229|NTN1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.386474609375	2	558.381177	1114.7478	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.51	1	112.54	112.04	113.04	0.032707								0	0	0	0.36143	1	13633	13633		3.9852	0.82601	1				22786	1125	15383	15393	26177	26177					0.19501806235666663
KPLLVALLL	9	Unmodified	_KPLLVALLL_					0	0	0			REV__nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	REV__nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.3445739746094	2	490.349346	978.684139	-0.93267	-0.00045733	-1.8406	-0.00090254	-2.7733	-0.0013599	490.3483419074247	70.54	3.2224	70.924	70.189	73.411	0.38416					144	77	2	0	0	0	0.7932	1	7881	7881		12.959	0	1	229730	+		22787	19155	15384	15394	26178	26178					0.19394445798559445
KPLPGQGSR	9	Unmodified	_KPLPGQGSR_					0	0	0		ENST00000361545.9_1_7:73818529-73818865:+|nuORF	ENST00000361545.9_1_7:73818529-73818865:+|nuORF	ENST00000361545.9_1_7:73818529-73818865:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	471.2421875	2	470.272158	938.529764	-0.96472	-0.00045368	2.3349	0.001098	1.3701	0.00064433	470.2733858221789	86.389	2.2096	86.582	85.24	87.449	0.19379					66	51	2	0	0	0	0.20789	1	8389	8389		31.53	1.0262	1	76978			22788	10483	15385	15395	26179	26179					0.05804009365908769
KPLPRIIAN	9	Unmodified	_KPLPRIIAN_					0	0	0			REV__ENSG00000138246|ENST00000260818|DNAJC13	REV__ENSG00000138246|ENST00000260818|DNAJC13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.3280029296875	2	511.329476	1020.6444	-0.33604	-0.00017183	-4.3544	-0.0022265	-4.6904	-0.0023984	511.32714059375644	97.081	2.0161	97.312	96.825	98.841	0.23103					133	46	4	0	0	0	0.78536	1	10092	10092		29.15	3.6994	1	3439200	+		22789	19452	15386	15396	26180	26180					0.13490318847846083
KPLQGPPAP	9	Unmodified	_KPLQGPPAP_					0	0	0		ENSG00000102096|ENST00000376509|PIM2	ENSG00000102096|ENST00000376509|PIM2	ENSG00000102096|ENST00000376509|PIM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.7637939453125	2	452.766178	903.517802	-1.8886	-0.0008551	-4.1399	-0.0018744	-6.0285	-0.0027295	452.76426110841714	39.559	0.86848	39.559	39.19	40.058	0					46	20	3	0	0	0	0.77546	1	2538	2538		31.955	5.1588	1	144770			22790	1989	15387	15397	26181	26181					0.0621839262270214
KPLRASEP	8	Unmodified	_KPLRASEP_					0	0	0		ENSG00000164061|ENST00000296452|BSN;ENST00000467456.1_1_3:49688206-49688659:+|nuORF	ENSG00000164061|ENST00000296452|BSN	ENSG00000164061|ENST00000296452|BSN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2607116699219	2	449.261259	896.507966	-1.0968	-0.00049275	-0.18393	-8.2631E-05	-1.2807	-0.00057538	449.2607952075847	68.72	0.63625	68.786	68.468	69.105	0.065506					51	27	3	0	0	0	0.87922	1	6179	6179		31.955	4.0726	1	231580			22791	5907	15388	15398	26182	26182					0.055572046173210765
KPLRIIGV	8	Unmodified	_KPLRIIGV_					0	0	0		ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1;ENST00000550179.1_1_12:56524667-56524898:+|nuORF	ENSG00000139641|ENST00000394048|ESYT1	ENSG00000139641|ENST00000394048|ESYT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3067321777344	2	448.308013	894.601472	0.78514	0.00035198	-3.786	-0.0016973	-3.0008	-0.0013453	448.30619684466785	23.308	1.6905	22.734	21.403	23.094	-0.57415					81	41	2	0	0	0	0.90465	1	1020	1020		40.573	8.6178	1	470240			22792	4386	15389	15399	26183	26183					0.14995548790420798
KPLRPGPGA	9	Unmodified	_KPLRPGPGA_					0	0	0			REV__nc|ENSG00000162777|Q9H6A0-2|DENND2D	REV__nc|ENSG00000162777|Q9H6A0-2|DENND2D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7614440917969	2	446.771794	891.529036	-0.07822	-3.4946E-05	1.4206	0.00063467	1.3424	0.00059973	446.7723079457312	24.035	0.52634	23.653	23.491	24.017	-0.38178					13	11	2	0	0	0	0.20789	1	1152	1152		25.45	1.2474	1	29668	+		22793	20847	15390	15400	26184	26184					0.07893214716841612
KPLRPGPGA	9	Unmodified	_KPLRPGPGA_					0	0	0			REV__nc|ENSG00000162777|Q9H6A0-2|DENND2D	REV__nc|ENSG00000162777|Q9H6A0-2|DENND2D	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	446.771794	891.529036	0.050402	2.2518E-05	-1.6251	-0.00072603	-1.5747	-0.00070351	446.7696397887251	23.275	0.07753	23.37	23.32	23.397	0.094501	-0.14166	-6.9868E-05	NaN	33.516	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16409	+		22794	20847	15390	15400							0.07893214716841612
KPLSHRNS	8	Unmodified	_KPLSHRNS_					0	0	0		ENSG00000073711|ENST00000264977|PPP2R3A	ENSG00000073711|ENST00000264977|PPP2R3A	ENSG00000073711|ENST00000264977|PPP2R3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.760498046875	2	469.761958	937.509363	-0.023436	-1.1009E-05	-3.1496	-0.0014796	-3.173	-0.0014906	469.76032512029695	40.348	1.0077	40.3	40.046	41.054	-0.04789					61	38	2	0	0	0	0.90983	1	2566	2566		42.396	1.8235	1	392540			22795	1295	15391	15401	26185	26185					0.03810838706078812
KPLTPPPLVGT	11	Unmodified	_KPLTPPPLVGT_					0	0	0			REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8448486328125	2	560.342249	1118.66995	1.3844	0.00077572	-4.0166	-0.0022507	-2.6322	-0.001475	560.3398338842395	118.75	0.66116	118.77	118.51	119.17	0.026466					37	27	2	0	0	0	0.7434	1	13100	13100		23.523	3.5259	1	39883	+		22796	20880	15392	15402	26186	26186					0.11535748579603933
KPLYDRYRIIK	11	Unmodified	_KPLYDRYRIIK_					0	0	0		nc|ENSG00000148541|Q8NE31-2|FAM13C;nc|ENSG00000148541|Q8NE31-3|FAM13C;nc|ENSG00000148541|Q8NE31-5|FAM13C;nc|ENSG00000148541|Q8NE31-4|FAM13C;ENSG00000148541|ENST00000618804|FAM13C	nc|ENSG00000148541|Q8NE31-2|FAM13C	nc|ENSG00000148541|Q8NE31-2|FAM13C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	488.96258544921875	3	488.961033	1463.86127	1.0149	0.00049626	1.9484	0.0009527	2.9633	0.001449	488.961914707451	16.485	0.37526	16.562	16.427	16.803	0.07715					19	13	2	0	0	0	0.79224	1	105	105		12.957	1.8607	1	40477			22797	4968	15393	15403	26187	26187					0.14789249610748811
KPNLGCSK	8	Carbamidomethyl (C)	_KPNLGC(Carbamidomethyl (C))SK_	KPNLGC(1)SK		KPNLGC(63)SK		0	1	0			REV__nc|ENSG00000085224|P46100-2|ATRX	REV__nc|ENSG00000085224|P46100-2|ATRX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.23919677734375	2	452.23947	902.464386	-0.38468	-0.00017397	0.79739	0.00036061	0.41271	0.00018664	452.23969293569223	25.238	1.266	24.91	24.476	25.742	-0.32825					51	28	3	0	0	0	0.79403	1	1296	1296		63.306	7.8021	1	474500	+		22798	16884	15394	15404	26188	26188	225				0.009252718485413425
KPNPLDLPQ	9	Unmodified	_KPNPLDLPQ_					0	0	0		nc|ENSG00000141027|O75376-2|NCOR1;ENSG00000141027|ENST00000268712|NCOR1;nc|ENSG00000141027|O75376-3|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.28289794921875	2	511.287474	1020.5604	-1.2853	-0.00065715	-0.086664	-4.431E-05	-1.3719	-0.00070146	511.2874104215347	41.926	2.0437	41.929	41.503	43.546	0.0034142					109	48	4	0	0	0	0.74721	1	3246	3246		37.159	0.71236	1	7262400			22799	4476	15395	15405	26189	26189					0.05093742960275449
KPNRVLAR	8	Unmodified	_KPNRVLAR_					0	0	0			REV__nc|ENSG00000004846|Q2M3G0-1|ABCB5;REV__nc|ENSG00000005471|P21439-3|ABCB4;REV__nc|ENSG00000085563|P08183-2|ABCB1	REV__nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.30718994140625	2	477.303793	952.593033	0.69736	0.00033285	4.2081	0.0020086	4.9055	0.0023414	477.3070531580169	20.485	0.27882	20.464	20.391	20.67	-0.020922					21	14	3	0	0	0	0.87479	1	497	497		30.504	5.0535	1	54226	+		22800	16894;16087;16066	15396	15406	26190	26190					0.11483994873788106
KPNVFKLKT	9	Unmodified	_KPNVFKLKT_					0	0	0		ENST00000518315.5_1_8:18393255-18632402:-|nuORF;nc|ENSG00000156011|Q9NYI0-3|PSD3;ENSG00000156011|ENST00000327040|PSD3;nc|ENSG00000156011|Q9NYI0|PSD3	ENST00000518315.5_1_8:18393255-18632402:-|nuORF	ENST00000518315.5_1_8:18393255-18632402:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.8567504882812	2	537.837134	1073.65972	-0.2738	-0.00014726	-2.8694	-0.0015433	-3.1432	-0.0016905	537.8353623911712	18.457	0.22855	17.836	17.676	17.905	-0.62141					7	4	2	0	0	0	0.20789	1	392	392		44.117	0	1	41070			22801	5357	15397	15407	26191	26191					0.12583185645053163
KPPAPKPSTPS	11	Unmodified	_KPPAPKPSTPS_					0	0	0			REV__ENSG00000160796|ENST00000450053|NBEAL2	REV__ENSG00000160796|ENST00000450053|NBEAL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.81298828125	2	553.813856	1105.61316	-0.54899	-0.00030404	0.73651	0.00040789	0.18752	0.00010385	553.8141037249087	27.065	0.75811	26.889	26.523	27.281	-0.17559					35	16	3	0	0	0	0.65746	1	1519	1519		37.812	1.3648	1	438870	+		22802	20741	15398	15408	26192	26192					0.06457701023077789
KPPKKTRKAQL	11	Unmodified	_KPPKKTRKAQL_					0	0	0			REV__ENSG00000116539|ENST00000392403|ASH1L	REV__ENSG00000116539|ENST00000392403|ASH1L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.25579833984375	3	432.282106	1293.82449	-1.5774	-0.00068188	-3.4712	-0.0015006	-5.0486	-0.0021824	432.6142363388371	106.9	0.68201	107.05	106.6	107.29	0.14843					30	16	3	0	0	0	0.17334	1	11478	11478		34.087	15.555	1	161930	+		22803	18201	15399	15409	26193	26193					0.18932997784850158
KPPKTRWL	8	Unmodified	_KPPKTRWL_					0	0	0			REV__ENSG00000160051|ENST00000291358|IQCC	REV__ENSG00000160051|ENST00000291358|IQCC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8157958984375	2	513.316369	1024.61818	0.40552	0.00020816	0.099859	5.1259E-05	0.50538	0.00025942	513.3165443291848	55.171	1.2841	55.262	54.835	56.119	0.091164					59	39	2	0	0	0	0.82658	1	4644	4644		21.96	1.013	1	269410	+		22804	20691	15400	15410	26194	26194					0.10686049676360199
KPPLAEVL	8	Unmodified	_KPPLAEVL_					0	0	0		ENSG00000101574|ENST00000574538|METTL4;ENST00000573134.1_1_18:2539001-2552773:-|nuORF	ENSG00000101574|ENST00000574538|METTL4	ENSG00000101574|ENST00000574538|METTL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.7714538574219	2	433.770929	865.527304	1.1273	0.000489	3.9094	0.0016958	5.0367	0.0021848	433.77107498521286	32.677	1.3148	32.889	32.337	33.651	0.21168					85	30	4	0	0	0	0.82464	1	2307	2307		21.702	1.2205	1	1051100			22805	1950	15401	15411	26195	26195					0.08916160908222537
KPPPPKKH	8	Unmodified	_KPPPPKKH_					0	0	0			REV__ENST00000331552.11_1_19:19314086-19314203:-|nuORF	REV__ENST00000331552.11_1_19:19314086-19314203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.7906494140625	2	464.789987	927.565421	-0.014658	-6.8129E-06	1.5846	0.00073649	1.5699	0.00072967	464.7906118209948	36.96	1.5179	36.936	36.1	37.617	-0.023979					72	33	3	0	0	0	0.86288	1	2341	2341		26.796	9.4311	1	237030	+		22806	25127	15402	15412	26196	26196					0.09874091613551172
KPPPPKKH	8	Unmodified	_KPPPPKKH_					0	0	0			REV__ENST00000331552.11_1_19:19314086-19314203:-|nuORF	REV__ENST00000331552.11_1_19:19314086-19314203:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7927551269531	2	464.789987	927.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.375	1	36.315	35.815	36.815	-0.060333								0	0	0	0.29631	1	1997	1997		25.45	4.9683	1		+		22807	25127	15402	15412	26197	26197					0.09874091613551172
KPPPPKPDSP	10	Unmodified	_KPPPPKPDSP_					0	0	0		ENST00000569492.1_1_16:35037299-35037500:-|nuORF	ENST00000569492.1_1_16:35037299-35037500:-|nuORF	ENST00000569492.1_1_16:35037299-35037500:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.29345703125	2	530.295299	1058.57605	-1.2396	-0.00065735	-2.6354	-0.0013976	-3.875	-0.0020549	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.82886	1	10794	10794		37.812	2.1932	1	1818700			22808	13981	15403	15413	26198	26198					0.04910029477309763
KPPPPPEVKKP	11	Unmodified	_KPPPPPEVKKP_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.24713134765625	3	405.248291	1212.72304	1.0635	0.00043097	-3.9532	-0.001602	-2.8897	-0.0011711	405.2465768037405	23.434	2.4302	22.86	22.409	24.839	-0.57415					118	56	3	0	0	0	0.70278	1	1144	1144		31.068	1.5174	1	383090	+		22809	20437	15404	15414	26199	26199					0.12519126362280986
KPPQLLLIAQI	11	Unmodified	_KPPQLLLIAQI_					0	0	0			REV__nc|ENSG00000067182|P19438-5|TNFRSF1A	REV__nc|ENSG00000067182|P19438-5|TNFRSF1A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	617.4058837890625	2	617.400099	1232.78564	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.361	1	22.409	21.909	22.909	0.048553								0	0	0	0.56276	1	659	659		19.104	4.2386	1		+		22810	29702	15405	15415	26200	26200					0.17856272430481113
KPPQPPSN	8	Unmodified	_KPPQPPSN_					0	0	0			REV__ENST00000521272.5_1_8:102214575-102216903:-|nuORF	REV__ENST00000521272.5_1_8:102214575-102216903:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.2451477050781	2	432.732335	863.450116	0.7155	0.00030962	-2.0407	-0.00088307	-1.3252	-0.00057345	432.73133843309995	98.545	0.62038	98.701	98.454	99.074	0.15659					21	13	2	0	0	0	0.4196	1	10211	10211		16.473	0	1	25722	+		22811	28114	15406	15416	26201	26201					0.012929426918958598
KPPREEFL	8	Unmodified	_KPPREEFL_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2798156738281	2	508.282192	1014.54983	-0.88176	-0.00044818	-2.9285	-0.0014885	-3.8102	-0.0019367	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.91472	1	8564	8564		44.117	5.3107	1	1261800			22812	2752	15407	15417	26202	26202					0.04313760305853975
KPPRRGRGP	9	Unmodified	_KPPRRGRGP_					0	0	0			REV__ENST00000295082.2_1_2:11052171-11052408:+|nuORF	REV__ENST00000295082.2_1_2:11052171-11052408:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8128356933594	2	510.812316	1019.61008	4.704	0.0024028	-3.382	-0.0017276	1.3219	0.00067527	510.81038527976574	106.02	0.73642	106.21	105.87	106.6	0.18647					70	29	3	0	0	0	0.7932	1	12950	12950		25.45	5.4534	1	1170500	+		22813	24695	15408	15418	26203	26203					0.10105915479607575
KPPSPRIPHY	10	Unmodified	_KPPSPRIPHY_					0	0	0		ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3338012695312	2	596.33529	1190.65603	-0.30561	-0.00018224	-3.6958	-0.002204	-4.0015	-0.0023862	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.86218	1	9746	9746		32.812	6.1195	1	740920			22814	1962	15409	15419	26204	26204					0.06832515871178657
KPPSRGQF	8	Unmodified	_KPPSRGQF_					0	0	0		nc|ENSG00000160226|O43822-2|CFAP410;ENST00000462742.1_1_21:45750083-45750963:-|nuORF;nc|ENSG00000160226|O43822-3|CFAP410;ENSG00000160226|ENST00000339818|CFAP410;nc|ENSG00000160226|O43822-4|CFAP410	nc|ENSG00000160226|O43822-2|CFAP410	nc|ENSG00000160226|O43822-2|CFAP410	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7515869140625	2	458.753601	915.49265	-0.018123	-8.3139E-06	-3.0476	-0.0013981	-3.0657	-0.0014064	458.7518060865104	23.767	1.7664	23.385	23.018	24.785	-0.38178					59	39	2	0	0	0	0.90465	1	1105	1105		40.573	1.7665	1	878750			22815	5572	15410	15420	26205	26205					0.03152337820142748
KPPVDIPAH	9	Unmodified	_KPPVDIPAH_					0	0	0		ENSG00000141580|ENST00000392325|WDR45B;ENST00000573656.5_1_17:80576964-80583409:-|nuORF	ENSG00000141580|ENST00000392325|WDR45B	ENSG00000141580|ENST00000392325|WDR45B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.276611328125	2	487.276909	972.539266	-0.74968	-0.0003653	-2.8967	-0.0014115	-3.6464	-0.0017768	487.2757927615724	27.963	0.5195	27.867	27.619	28.139	-0.096947					31	11	4	0	0	0	0.7932	1	1652	1652		24.203	0	1	182210			22816	4517	15411	15421	26206	26206					0.051897776514124416
KPPYFNALAT	10	Unmodified	_KPPYFNALAT_					0	0	0			REV__ENST00000234256.3_1_2:65248292-65248664:+|nuORF	REV__ENST00000234256.3_1_2:65248292-65248664:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.286376953125	2	561.303124	1120.5917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.127	1	47.146	46.646	47.646	0.018967								0	0	0	0.45132	1	3506	3506		25.574	2.0514	1		+		22817	24209	15412	15422	26207	26207					0.036223159943801875
KPQALGQRHV	10	Unmodified	_KPQALGQRHV_					0	0	0			REV__ENST00000397898.7_1_21:46226040-46226160:-|nuORF	REV__ENST00000397898.7_1_21:46226040-46226160:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	566.839111328125	2	567.330539	1132.64652	-1.204	-0.00068309	1.1265	0.00063909	-0.077569	-4.4007E-05	567.331119401705	100.26	1.4157	100.3	100.05	101.46	0.0411					50	32	2	0	0	0	0.37624	1	10716	10716		29.15	15.012	1	82634	+		22818	26185	15413	15423	26208	26208					0.08550747585650242
KPQALGQRHV	10	Unmodified	_KPQALGQRHV_					0	0	0			REV__ENST00000397898.7_1_21:46226040-46226160:-|nuORF	REV__ENST00000397898.7_1_21:46226040-46226160:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	567.330539	1132.64652	1.493	0.00084702	-0.64917	-0.00036829	0.84383	0.00047873	567.3304183654586	100.28	1.3175	100.32	99.983	101.3	0.046356	0.042523	-0.0017326	NaN	29.15	46	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140670	+		22819	26185	15413	15423							0.08550747585650242
KPQALGQRHV	10	Unmodified	_KPQALGQRHV_					0	0	0			REV__ENST00000397898.7_1_21:46226040-46226160:-|nuORF	REV__ENST00000397898.7_1_21:46226040-46226160:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	567.330539	1132.64652	-1.3958	-0.00079189	1.0645	0.00060393	-0.33131	-0.00018796	567.331079190179	100.05	1.7615	100.22	99.759	101.52	0.17199	-0.064185	0.00021186	NaN	29.15	59	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95812	+		22820	26185	15413	15423							0.08550747585650242
KPQEAPTKKVK	11	Unmodified	_KPQEAPTKKVK_					0	0	0			REV__ENSG00000143970|ENST00000435504|ASXL2	REV__ENSG00000143970|ENST00000435504|ASXL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3841552734375	2	627.382437	1252.75032	2.3056	0.0014465	-2.8861	-0.0018107	-0.58047	-0.00036418	627.3803712370747	111.61	0.69481	111.65	111.16	111.85	0.041832					78	24	4	0	0	0	0.72106	1	13506	13506		28.081	1.3886	1	19059000	+		22821	19860	15414	15424	26209	26209					0.13405609902633842
KPQKLARSPAR	11	Unmodified	_KPQKLARSPAR_					0	0	0		ENSG00000032219|ENST00000355431|ARID4A	ENSG00000032219|ENST00000355431|ARID4A	ENSG00000032219|ENST00000355431|ARID4A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3833618164062	2	626.385845	1250.75714	-0.23113	-0.00014477	2.428	0.0015209	2.1969	0.0013761	626.3872612526313	117.84	0.45222	117.77	117.68	118.13	-0.07531					27	17	2	0	0	0	0.17552	1	12659	12659		23.523	0	1	402730			22822	884	15415	15425	26210	26210					0.14178967573889167
KPQKLARSPAR	11	Unmodified	_KPQKLARSPAR_					0	0	0		ENSG00000032219|ENST00000355431|ARID4A	ENSG00000032219|ENST00000355431|ARID4A	ENSG00000032219|ENST00000355431|ARID4A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3836059570312	2	626.385845	1250.75714	0.92598	0.00058002	0.36221	0.00022688	1.2882	0.0008069	626.8877087022497	112.21	0.23088	112.28	112.08	112.31	0.066032					12	7	2	0	0	0	0.17472	1	12094	12094		18.262	8.5564	1	226540			22823	884	15415	15425	26211	26211					0.14178967573889167
KPQKLARSPAR	11	Unmodified	_KPQKLARSPAR_					0	0	0		ENSG00000032219|ENST00000355431|ARID4A	ENSG00000032219|ENST00000355431|ARID4A	ENSG00000032219|ENST00000355431|ARID4A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3836669921875	2	626.385845	1250.75714	-1.2035	-0.00075388	0.74785	0.00046844	-0.45569	-0.00028544	626.3861417654356	112.13	0.96798	112.12	111.85	112.82	-0.01989					55	29	2	0	0	0	0.17457	1	11958	11958		21.686	10.589	1	6783800			22824	884	15415	15425	26212	26212					0.14178967573889167
KPQKLARSPAR	11	Unmodified	_KPQKLARSPAR_					0	0	0		ENSG00000032219|ENST00000355431|ARID4A	ENSG00000032219|ENST00000355431|ARID4A	ENSG00000032219|ENST00000355431|ARID4A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3831787109375	2	626.385845	1250.75714	2.3217	0.0014543	-1.8391	-0.001152	0.48266	0.00030233	626.3849576526338	111.94	0.21839	111.98	111.85	112.07	0.041832					12	6	2	0	0	0	0.17714	1	13534	13534		19.104	0	1	232840			22825	884	15415	15425	26213	26213					0.14178967573889167
KPQLLEQTKRL	11	Unmodified	_KPQLLEQTKRL_					0	0	0		ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A;nc|ENSG00000168356|Q9UI33-2|SCN11A	ENSG00000168356|ENST00000302328|SCN11A	ENSG00000168356|ENST00000302328|SCN11A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.27789306640625	3	451.945271	1352.81398	-1.2917	-0.0005838	-3.0438	-0.0013756	-4.3355	-0.0019594	451.94377054874303	55.311	1.3656	55.375	54.704	56.07	0.063725					141	47	4	0	0	0	0.71921	1	4647	4647		28.384	1.6341	1	457030			22826	6395	15416	15426	26214	26214					0.15168970339732368
KPQLVRLLGTA	11	Unmodified	_KPQLVRLLGTA_					0	0	0		ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.3810424804688	2	598.379697	1194.74484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.891	1	22.882	22.382	23.382	-0.0088215								0	0	0	0.56276	1	698	698		22.58	3.2197	1				22827	8876	15417	15427	26215	26215					0.15525931110846614
KPQPFHSLL	9	Unmodified	_KPQPFHSLL_					0	0	0			REV__ENST00000263980.7_1_1:27480949-27481393:-|nuORF	REV__ENST00000263980.7_1_1:27480949-27481393:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.7935180664062	2	533.805834	1065.59712	0.1726	9.2134E-05	1.7163	0.00091618	1.8889	0.0010083	533.8064352844348	16.177	0.18247	15.578	15.465	15.648	-0.59873					5	3	2	0	0	0	0.20789	1	105	105		24.203	0	1	56855	+		22828	24458	15418	15428	26216	26216					0.06694039576859723
KPQPTTRTPPQ	11	Unmodified	_KPQPTTRTPPQ_					0	0	0		ENST00000502854.5_1_5:176830573-176831380:-|nuORF;ENST00000510358.5_1_5:176831194-176831380:-|nuORF;ENSG00000131187|ENST00000253496|F12	ENST00000502854.5_1_5:176830573-176831380:-|nuORF;ENSG00000131187|ENST00000253496|F12	ENSG00000131187|ENST00000253496|F12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.8458862304688	2	625.846219	1249.67788	2.3174	0.0014503	-2.2774	-0.0014253	0.039994	2.503E-05	625.8447283404247	36.074	0.64915	36.514	36.222	36.871	0.44043					51	15	4	0	0	0	0.50531	1	2841	2841		51.528	2.0862	1	2038600			22829	12866;3719	15419	15429	26217	26217					0.06303275829077393
KPQRKLQSTL	10	Unmodified	_KPQRKLQSTL_					0	0	0		ENST00000474311.1_1_3:112724385-112727343:-|nuORF;ENST00000472637.5_1_3:112724385-112732818:-|nuORF;nc|ENSG00000163608|Q6NW34-2|NEPRO;ENSG00000163608|ENST00000314400|NEPRO	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.58056640625	3	400.247062	1197.71936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.17	1	112.2	111.7	112.7	0.028854								0	0	0	0.45132	1	12266	12266		14.694	3.0577	1				22830	5834	15420	15430	26218	26218					0.12840456588423876
KPQRNKGIVRD	11	Unmodified	_KPQRNKGIVRD_					0	0	0			REV__ENSG00000255974|ENST00000301141|CYP2A6	REV__ENSG00000255974|ENST00000301141|CYP2A6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.59326171875	3	437.593232	1309.75787	-1.625	-0.00071111	2.758	0.0012069	1.133	0.00049578	437.5943775926199	17.133	0.5139	17.178	16.97	17.484	0.0457					57	22	4	0	0	0	0.75779	1	216	216		20.315	1.784	1	252600	+		22831	23274	15421	15431	26219	26219					0.11537762222928905
KPQRSPGN	8	Unmodified	_KPQRSPGN_					0	0	0			REV__ENSG00000133069|ENST00000358024|TMCC2	REV__ENSG00000133069|ENST00000358024|TMCC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2408142089844	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.91472	1	7816	7816		44.117	3.5442	1	1219900	+		22832	19054	15422	15432	26220	26220					0.021228632977113193
KPQSIFKKAM	10	Unmodified	_KPQSIFKKAM_					0	0	0		ENST00000509377.1_3_4:77172961-77230323:+|nuORF	ENST00000509377.1_3_4:77172961-77230323:+|nuORF	ENST00000509377.1_3_4:77172961-77230323:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.343505859375	2	589.341726	1176.6689	-0.65438	-0.00038565	2.6476	0.0015603	1.9932	0.0011747	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.8651	1	10213	10213		25.574	0.12388	1	16804000			22833	12989	15423	15433	26221	26221					0.08763210939059718
KPQSIFKKAM	10	Unmodified	_KPQSIFKKAM_					0	0	0		ENST00000509377.1_3_4:77172961-77230323:+|nuORF	ENST00000509377.1_3_4:77172961-77230323:+|nuORF	ENST00000509377.1_3_4:77172961-77230323:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3432006835938	2	589.341726	1176.6689	-1.324	-0.0007803	3.288	0.0019378	1.964	0.0011575	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86218	1	9866	9866		32.812	0.85756	1	17904000			22834	12989	15423	15433	26222	26222					0.08763210939059718
KPQSSAIASR	10	Unmodified	_KPQSSAIASR_					0	0	0			REV__ENST00000546954.1_1_12:120881792-120882053:-|nuORF	REV__ENST00000546954.1_1_12:120881792-120882053:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.7950439453125	2	522.793455	1043.57236	0.077043	4.0278E-05	-0.16914	-8.8425E-05	-0.092097	-4.8148E-05	522.7932298193799	22.078	0.91792	21.467	21.072	21.99	-0.6107					46	22	4	0	0	0	0.5442	1	854	854		53.089	3.5529	1	468110	+		22835	28542	15424	15434	26223	26223					0.05231359703475391
KPREAMAV	8	Unmodified	_KPREAMAV_					0	0	0		ENSG00000185056|ENST00000340147|C5orf47	ENSG00000185056|ENST00000340147|C5orf47	ENSG00000185056|ENST00000340147|C5orf47	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.24749755859375	2	451.249837	900.485122	-0.14165	-6.3919E-05	-2.2206	-0.0010021	-2.3623	-0.001066	451.24867992302364	67.749	1.1743	67.771	67.401	68.576	0.021599					102	53	2	0	0	0	0.91977	1	6407	6407		45.952	1.8352	1	167670			22836	7677	15425	15435	26224	26224					0.0308986222820522
KPRFHRPIFSL	11	Unmodified	_KPRFHRPIFSL_					0	0	0			REV__ENSG00000054938|ENST00000376332|CHRDL2	REV__ENSG00000054938|ENST00000376332|CHRDL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.6075744628906	3	466.610334	1396.80917	-0.93039	-0.00043413	-4.2127	-0.0019657	-5.1431	-0.0023998	466.6082212965859	101	2.1787	101	99.472	101.65	0					144	51	4	0	0	0	0.76892	1	10200	10200		17.833	0.6664	1	331070	+		22837	16407	15426	15436	26225	26225					0.12664130987650424
KPRFKKGKEII	11	Unmodified	_KPRFKKGKEII_					0	0	0			REV__ENSG00000206530|ENST00000393845|CFAP44	REV__ENSG00000206530|ENST00000393845|CFAP44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.6232604980469	3	448.62224	1342.84489	0.42833	0.00019216	0.15255	6.8438E-05	0.58088	0.0002606	448.62234713805896	64.979	0.40133	65.104	64.84	65.241	0.12431					17	14	2	0	0	0	0.75906	1	5746	5746		20.03	1.4994	1	107260	+		22838	23589	15427	15437	26226	26226					0.18718168444684125
KPRGRRRPD	9	Unmodified	_KPRGRRRPD_					0	0	0		nc|ENSG00000167702|Q96AC6|KIFC2;ENSG00000167702|ENST00000645548|KIFC2	nc|ENSG00000167702|Q96AC6|KIFC2	nc|ENSG00000167702|Q96AC6|KIFC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.3391723632812	2	569.33923	1136.66391	0.75714	0.00043107	1.4723	0.00083826	2.2295	0.0012693	569.3400134257108	22.311	0.57802	21.892	21.652	22.23	-0.41879					31	12	3	0	0	0	0.7932	1	888	888		20.947	0	1	176710			22839	15076	15428	15438	26227	26227					0.10104087911304305
KPRIPMETF	9	Unmodified	_KPRIPMETF_					0	0	0		nc|ENSG00000137648|Q9NRS4-2|TMPRSS4;nc|ENSG00000137648|Q9NRS4-3|TMPRSS4;ENSG00000137648|ENST00000437212|TMPRSS4	nc|ENSG00000137648|Q9NRS4-2|TMPRSS4	nc|ENSG00000137648|Q9NRS4-2|TMPRSS4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	559.8032836914062	2	559.804977	1117.5954	-0.63937	-0.00035792	-2.2251	-0.0012456	-2.8645	-0.0016035	559.8035328499079	86.861	0.95203	86.861	86.517	87.469	0					62	21	4	0	0	0	0.74721	1	8350	8350		37.159	2.9866	1	647940			22840	4220	15429	15439	26228	26228					0.04130662496572768
KPRLKSGGG	9	Unmodified	_KPRLKSGGG_					0	0	0		ENSG00000161956|ENST00000321337|SENP3	ENSG00000161956|ENST00000321337|SENP3	ENSG00000161956|ENST00000321337|SENP3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2737731933594	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.09	1	113.07	112.57	113.57	-0.024811								0	0	0	0.32469	1	12508	12508		21.96	1.4781	1				22841	5660	15430	15440	26229	26229					0.08152313228526964
KPRNDDIFKII	11	Unmodified	_KPRNDDIFKII_					0	0	0		ENSG00000144891|ENST00000349243|AGTR1	ENSG00000144891|ENST00000349243|AGTR1	ENSG00000144891|ENST00000349243|AGTR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.8810119628906	3	453.597871	1357.77178	0.24354	0.00011047	-2.8688	-0.0013013	-2.6253	-0.0011908	453.59656159599746	17.733	0.18732	17.112	17.023	17.21	-0.62141					7	4	2	0	0	0	0.17784	1	300	300		17.167	3.0807	1	19169			22842	4741	15431	15441	26230	26230					0.10720994931375571
KPRPGKPLP	9	Unmodified	_KPRPGKPLP_					0	0	0		ENSG00000265763|ENST00000585316|ZNF488	ENSG00000265763|ENST00000585316|ZNF488	ENSG00000265763|ENST00000585316|ZNF488	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	495.3142395019531	2	495.316369	988.618185	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.132	1	15.181	14.681	15.681	0.04908								0	0	0	0.33676	1	12	12		18.324	3.6603	1				22843	8946	15432	15442	26231	26231					0.12342049676362876
KPRPGLSL	8	Unmodified	_KPRPGLSL_					0	0	0			REV__ENST00000341901.4_1_16:28304063-28304252:+|nuORF	REV__ENST00000341901.4_1_16:28304063-28304252:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25140380859375	2	434.27417	866.533787	0.25147	0.00010921	-1.3358	-0.00058012	-1.0844	-0.00047091	434.27341837269415	79.396	1.8662	79.945	79.192	81.058	0.54945					70	43	3	0	0	0	0.4196	1	9275	9275		23.042	0	1	976970	+		22844	25265	15433	15443	26232	26232					0.09518098859621205
KPRPGLSL	8	Unmodified	_KPRPGLSL_					0	0	0			REV__ENST00000341901.4_1_16:28304063-28304252:+|nuORF	REV__ENST00000341901.4_1_16:28304063-28304252:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25140380859375	2	434.27417	866.533787	0.30492	0.00013242	-1.7003	-0.00073841	-1.3954	-0.00060599	434.27325344229297	80.861	0.56972	81.387	81.078	81.647	0.52676					20	13	2	0	0	0	0.4196	1	9349	9349		37.159	2.9866	1	355700	+		22845	25265	15433	15443	26233	26233					0.09518098859621205
KPRPLLAW	8	Unmodified	_KPRPLLAW_					0	0	0		ENST00000403325.5_1_22:19841974-19842145:-|nuORF	ENST00000403325.5_1_22:19841974-19842145:-|nuORF	ENST00000403325.5_1_22:19841974-19842145:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.8042297363281	2	490.805637	979.596721	0.8824	0.00043309	-0.67826	-0.00033289	0.20414	0.0001002	490.8050515680166	28.128	0.66595	27.873	27.587	28.253	-0.25465					35	15	4	0	0	0	0.9159	1	1681	1681		44.531	0.41427	1	298140			22846	11252	15434	15444	26234	26234					0.10610664647640533
KPRPLVEWLR	10	Unmodified	_KPRPLVEWLR_					0	0	0		ENSG00000173926|ENST00000308660|MARCHF3	ENSG00000173926|ENST00000308660|MARCHF3	ENSG00000173926|ENST00000308660|MARCHF3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	647.8639526367188	2	647.393139	1292.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.93	1	112	111.5	112.5	0.069542								0	0	0	0.45132	1	12056	12056		21.96	1.9631	1				22847	6899	15435	15445	26235	26235					0.13705039722026413
KPRPRGTG	8	Unmodified	_KPRPRGTG_					0	0	0			REV__ENST00000430953.1_1_20:14738267-14738540:+|nuORF	REV__ENST00000430953.1_1_20:14738267-14738540:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7597351074219	2	434.759218	867.503883	-1.1839	-0.00051471	1.8024	0.00078363	0.61853	0.00026891	434.7597390953803	87.854	3.3898	87.854	86.125	89.515	0					151	78	4	0	0	0	0.85277	1	8457	8457		25.45	0	1	789230	+		22848	26612	15436	15446	26236	26236					0.06483159914296266
KPRPRGTG	8	Unmodified	_KPRPRGTG_					0	0	0			REV__ENST00000430953.1_1_20:14738267-14738540:+|nuORF	REV__ENST00000430953.1_1_20:14738267-14738540:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7598571777344	2	434.759218	867.503883	1.0426	0.00045328	-1.4353	-0.00062401	-0.39271	-0.00017073	434.7588689622068	87.637	3.2918	87.563	86.012	89.304	-0.073997					167	77	4	0	0	0	0.884	1	9107	9107		33.516	1.5607	1	1572200	+		22849	26612	15436	15446	26237	26237					0.06483159914296266
KPRRCVKKTT	10	Unmodified	_KPRRCVKKTT_					0	0	0			REV__ENST00000491598.5_1_7:139726040-139754542:-|nuORF	REV__ENST00000491598.5_1_7:139726040-139754542:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.58624267578125	3	406.248408	1215.72339	3.1409	0.001276	-1.1136	-0.00045241	2.0273	0.00082357	406.24731251758544	112.95	0.35545	112.98	112.85	113.21	0.030602					32	16	3	0	0	0	0.8492	1	13675	13675		18.531	1.063	1	70867	+		22850	27659	15437	15447	26238	26238					0.1241622281047512
KPRRGQVE	8	Unmodified	_KPRRGQVE_					0	0	0			REV__ENST00000263904.4_1_2:153032212-153032386:-|nuORF	REV__ENST00000263904.4_1_2:153032212-153032386:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.30621337890625	2	485.283057	968.551562	0.38518	0.00018692	-0.025041	-1.2152E-05	0.36014	0.00017477	485.28490684678707	32.104	0.25819	32.211	32.016	32.274	0.10707					6	5	2	0	0	0	0.4196	1	2211	2211		40.573	19.626	1	29921	+		22851	24457	15438	15448	26239	26239					0.06602814114478406
KPRRREPKMK	10	Unmodified	_KPRRREPKMK_					0	0	0			REV__ENST00000555253.1_1_14:75412914-75413107:-|nuORF	REV__ENST00000555253.1_1_14:75412914-75413107:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.60101318359375	3	442.603074	1324.78739	-0.15208	-6.7312E-05	-4.4388	-0.0019646	-4.5909	-0.0020319	442.6010716654733	103.97	1.4842	103.96	103.51	105	-0.0035706					84	35	4	0	0	0	0.84763	1	11225	11225		17.833	3.7471	1	603650	+		22852	18363	15439	15449	26240	26240					0.13799002967402885
KPRRSRQRLTR	11	Unmodified	_KPRRSRQRLTR_					0	0	0			REV__ENSG00000196421|ENST00000636176|C20orf204	REV__ENSG00000196421|ENST00000636176|C20orf204	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.3039245605469	3	485.302675	1452.8862	1.0097	0.00049003	-1.2075	-0.00058599	-0.19772	-9.5956E-05	485.3020682659724	16.477	0.64601	16.554	16.427	17.073	0.07715					46	24	4	0	0	0	0.80813	1	117	117		9.6461	3.6451	1	156250	+		22853	23128	15440	15450	26241	26241					0.17786742256680554
KPRRSRQRLTR	11	Unmodified	_KPRRSRQRLTR_					0	0	0			REV__ENSG00000196421|ENST00000636176|C20orf204	REV__ENSG00000196421|ENST00000636176|C20orf204	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.6368103027344	3	485.302675	1452.8862	-0.29182	-0.00014162	0.010381	5.0378E-06	-0.28144	-0.00013658	485.30268724197236	16.712	0.34562	16.633	16.489	16.834	-0.079056					35	13	4	0	0	0	0.81219	1	147	147		8.7993	2.4784	1	158560	+		22854	23128	15440	15450	26242	26242					0.17786742256680554
KPRVAALI	8	Unmodified	_KPRVAALI_					0	0	0		nc|ENSG00000135048|Q9UHN6-2|CEMIP2;ENSG00000135048|ENST00000377044|CEMIP2	nc|ENSG00000135048|Q9UHN6-2|CEMIP2	nc|ENSG00000135048|Q9UHN6-2|CEMIP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25146484375	2	434.292362	866.570172	0.55585	0.0002414	-0.11744	-5.1005E-05	0.43841	0.0001904	434.29220550241394	80.891	0.66953	81.035	80.612	81.282	0.14352					23	15	2	0	0	0	0.4196	1	7711	7711		19.36	4.6959	1	43591			22855	3977	15441	15451	26243	26243					0.13154975756322074
KPRWVKIF	8	Unmodified	_KPRWVKIF_					0	0	0		nc|ENSG00000143376|Q96L92-3|SNX27;ENSG00000143376|ENST00000458013|SNX27;nc|ENSG00000143376|Q96L92-2|SNX27;ENST00000368841.6_1_1:151584666-151666074:+|nuORF	nc|ENSG00000143376|Q96L92-3|SNX27	nc|ENSG00000143376|Q96L92-3|SNX27	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.32421875	2	537.334562	1072.65457	0.37061	0.00019914	4.4568	0.0023948	4.8274	0.0025939	537.3369868087913	17.178	0.18278	16.695	16.579	16.761	-0.48256					5	3	2	0	0	0	0.4196	1	228	228		50.025	27.445	1	42342			22856	4623	15442	15452	26244	26244					0.12114926573053708
KPSAVILP	8	Unmodified	_KPSAVILP_					0	0	0			REV__ENSG00000181192|ENST00000263035|DHTKD1	REV__ENSG00000181192|ENST00000263035|DHTKD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.76702880859375	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.90983	1	2887	2887		42.396	10.441	1	681490	+		22857	22444	15443	15453	26245	26245					0.09792178253815109
KPSGRGPASA	10	Unmodified	_KPSGRGPASA_					0	0	0		ENST00000278823.6_1_11:62369120-62369234:-|nuORF	ENST00000278823.6_1_11:62369120-62369234:-|nuORF	ENST00000278823.6_1_11:62369120-62369234:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2541809082031	2	464.253966	926.493378	-0.76573	-0.00035549	0.99904	0.00046381	0.2333	0.00010831	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.85981	1	9741	9741		35.152	3.1972	1	1046600			22858	9613	15444	15454	26246	26246					0.027191324691784757
KPSKAVKKT	9	Unmodified	_KPSKAVKKT_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.7409362792969	2	493.821484	985.628415	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.088	1	22.088	21.588	22.588	0								0	0	0	0.31437	1	636	636		25.574	2.5316	1		+		22859	22956	15445	15455	26247	26247					0.13502612610943743
KPSKKVPAEHY	11	Unmodified	_KPSKKVPAEHY_					0	0	0			REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3609619140625	2	642.358962	1282.70337	2.6975	0.0017327	2.3103	0.0014841	5.0078	0.0032168	642.3601603180224	112.87	0.9769	112.84	112.65	113.62	-0.024811					46	24	2	0	0	0	0.51007	2	12527	12527;12559		51.193	8.9426	1	12229000	+		22860	28466	15446	15456	26248;26249	26248					0.0733275035152019
KPSKKVPAEHY	11	Unmodified	_KPSKKVPAEHY_					0	0	0			REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3619384765625	2	642.358962	1282.70337	2.6974	0.0017327	2.0595	0.0013229	4.7569	0.0030556	642.359695370679	114.18	2.3126	114.16	113.46	115.77	-0.024452					163	86	2	0	0	0	0.69995	2	12678	12678;12702		31.53	5.9558	1	464940	+		22861	28466	15446	15456	26250;26251	26250					0.0733275035152019
KPSKKVPAEHY	11	Unmodified	_KPSKKVPAEHY_					0	0	0			REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.3634643554688	2	642.358962	1282.70337	1.6044	0.0010306	3.846	0.0024705	5.4504	0.0035011	642.3622346823327	110.04	1.0264	110.16	109.72	110.75	0.1229					129	37	5	0	0	0	0.51007	1	11874	11874		51.193	3.2771	1	10986000	+		22862	28466	15446	15456	26252	26252					0.0733275035152019
KPSKKVPAEHY	11	Unmodified	_KPSKKVPAEHY_					0	0	0			REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.364501953125	2	642.358962	1282.70337	2.0845	0.001339	4.4555	0.002862	6.54	0.004201	642.361819653108	110.23	1.6844	110.29	109.66	111.35	0.054062					109	58	2	0	0	0	0.5603	1	13316	13316		47.657	3.5405	1	2848100	+		22863	28466	15446	15456	26253	26253					0.0733275035152019
KPSKKVPAEHY	11	Unmodified	_KPSKKVPAEHY_					0	0	0			REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.362060546875	2	642.358962	1282.70337	2.0883	0.0013414	3.63	0.0023318	5.7183	0.0036732	642.3608064218109	112.21	4.9435	112.24	112.06	117	0.030602					291	230	2	0	0	0	0.64498	2	13846	13824;13846		39.253	2.8061	1	12073000	+		22864	28466	15446	15456	26254;26255	26255					0.0733275035152019
KPSKKVPAEHY	11	Unmodified	_KPSKKVPAEHY_					0	0	0			REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3652954101562	2	642.358962	1282.70337	6.9532	0.0044665	-2.2337	-0.0014349	4.7195	0.0030316	643.3583899198403	109.87	1.5654	109.94	109.77	111.34	0.068001					57	20	3	0	0	0	0.65746	1	13358	13358		37.812	2.6595	1	2295800	+		22865	28466	15446	15456	26256	26256					0.0733275035152019
KPSKKVPAEHY	11	Unmodified	_KPSKKVPAEHY_					0	0	0			REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	REV__ENST00000540594.5_1_15:34439399-34502250:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	642.358962	1282.70337	-1.1513	-0.00073953	6.5528	0.0042092	5.4015	0.0034697	642.3617112824156	113.01	0.13258	112.97	112.88	113.01	-0.032333	0.16114	0.0063992	NaN	51.193	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17323	+		22866	28466	15446	15456							0.0733275035152019
KPSKNVAR	8	Unmodified	_KPSKNVAR_					0	0	0		ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-3|CLEC16A;ENST00000261657.5_1_16:11260358-11272544:+|nuORF	ENSG00000038532|ENST00000409790|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7545471191406	2	450.274701	898.534849	-0.14202	-6.395E-05	0.27543	0.00012402	0.1334	6.0069E-05	450.27476414752107	81.967	1.5916	82.031	81.532	83.123	0.064384					88	36	3	0	0	0	0.4196	1	8026	8026		26.796	13.021	1	392080			22867	918	15447	15457	26257	26257					0.08152313228515595
KPSKWLLE	8	Unmodified	_KPSKWLLE_					0	0	0		nc|ENSG00000165671|Q96L73-3|NSD1;ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;ENST00000375350.3_1_5:176662823-176666819:+|nuORF	nc|ENSG00000165671|Q96L73-3|NSD1	nc|ENSG00000165671|Q96L73-3|NSD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.79827880859375	2	500.794935	999.575317	2.7418	0.0013731	3.7279	0.0018669	6.4696	0.00324	500.79706432207496	25.439	1.0282	25.008	24.454	25.482	-0.4311					55	23	5	0	0	0	0.42407	1	1317	1317		79.451	4.4077	1	516210			22868	6108	15448	15458	26258	26258					0.07551234828281395
KPSKWLLE	8	Unmodified	_KPSKWLLE_					0	0	0		nc|ENSG00000165671|Q96L73-3|NSD1;ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;ENST00000375350.3_1_5:176662823-176666819:+|nuORF	nc|ENSG00000165671|Q96L73-3|NSD1	nc|ENSG00000165671|Q96L73-3|NSD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	500.794935	999.575317	0.12103	6.0611E-05	6.2752	0.0031426	6.3963	0.0032032	500.7977519820193	25.114	0.17135	25.214	25.08	25.251	0.10045	0.11239	-0.00013781	NaN	79.451	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36474			22869	6108	15448	15458							0.07551234828281395
KPSKYVPVSA	10	Unmodified	_KPSKYVPVSA_					0	0	0		ENSG00000156599|ENST00000287169|ZDHHC5	ENSG00000156599|ENST00000287169|ZDHHC5	ENSG00000156599|ENST00000287169|ZDHHC5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3265991210938	2	538.310949	1074.60735	-0.15211	-8.1881E-05	0.068833	3.7053E-05	-0.083274	-4.4827E-05	538.3116375520142	101.48	0.20653	101.51	101.45	101.66	0.031036					6	4	2	0	0	0	0.37624	1	10850	10850		30.318	0	1	113210			22870	5385	15449	15459	26259	26259					0.07302602511435907
KPSLVSVPPVP	11	Unmodified	_KPSLVSVPPVP_					0	0	0			REV__ENST00000517813.1_1_8:142202910-142203504:+|nuORF	REV__ENST00000517813.1_1_8:142202910-142203504:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3406982421875	2	560.342249	1118.66995	0.75729	0.00042434	-4.3961	-0.0024633	-3.6388	-0.002039	560.3396777082794	89.478	2.7427	89.63	87.684	90.427	0.1519					160	64	4	0	0	0	0.60058	1	8927	8927		44.377	8.7589	1	678500	+		22871	28051	15450	15460	26260	26260					0.11535748579603933
KPSNVNLH	8	Unmodified	_KPSNVNLH_					0	0	0			REV__ENST00000416792.1_3_19:55944525-55949973:-|nuORF	REV__ENST00000416792.1_3_19:55944525-55949973:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	454.7518005371094	2	454.751059	907.487565	-1.6847	-0.00076611	2.3264	0.001058	0.64176	0.00029184	454.7515981670757	53.014	0.66855	53.014	52.679	53.348	0					25	17	2	0	0	0	0.79403	1	4396	4396		63.306	5.495	1	77189	+		22872	26437	15451	15461	26261	26261					0.030120339575091748
KPSPHTIAQP	10	Unmodified	_KPSPHTIAQP_					0	0	0		ENST00000490199.2_1_9:35841173-35846157:+|nuORF	ENST00000490199.2_1_9:35841173-35846157:+|nuORF	ENST00000490199.2_1_9:35841173-35846157:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7988891601562	2	538.298373	1074.58219	2.0126	0.0010834	-2.2294	-0.0012001	-0.21685	-0.00011673	538.29703109323	26.01	0.85884	25.579	25.191	26.05	-0.4311					45	19	4	0	0	0	0.4892	1	1390	1390		56.721	3.7844	1	561100			22873	12666	15452	15462	26262	26262					0.04788547708835722
KPSPKLLPFKV	11	Unmodified	_KPSPKLLPFKV_					0	0	0			REV__ENSG00000067704|ENST00000366922|IARS2	REV__ENSG00000067704|ENST00000366922|IARS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.60748291015625	3	418.604186	1252.79073	-1.7442	-0.00073012	3.1032	0.001299	1.359	0.00056889	418.60537062211796	49.043	4.3192	49.043	47.911	52.23	0					175	108	3	0	0	0	0.76892	1	4155	4155		17.833	2.5	1	101990	+		22874	16547	15453	15463	26263	26263					0.1744457629304179
KPSSVEGIK	9	Unmodified	_KPSSVEGIK_					0	0	0			REV__nc|ENSG00000035928|P35251|RFC1	REV__nc|ENSG00000035928|P35251|RFC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.774169921875	2	472.7742	943.533846	0.76275	0.00036061	0.37727	0.00017837	1.14	0.00053897	472.7737350160956	22.936	0.70856	22.517	22.016	22.725	-0.41879					42	16	4	0	0	0	0.48102	1	965	965		52.937	8.5595	1	330150	+		22875	16290	15454	15464	26264	26264					0.05982054068954312
KPSSVEGIK	9	Unmodified	_KPSSVEGIK_					0	0	0			REV__nc|ENSG00000035928|P35251|RFC1	REV__nc|ENSG00000035928|P35251|RFC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.7740478515625	2	472.7742	943.533846	-0.13618	-6.4381E-05	1.7563	0.00083035	1.6202	0.00076597	472.7741354171197	22.959	0.93172	22.375	21.851	22.782	-0.58348					48	22	4	0	0	0	0.48102	1	994	994		52.937	2.9032	1	487620	+		22876	16290	15454	15464	26265	26265					0.05982054068954312
KPSTQNLL	8	Unmodified	_KPSTQNLL_					0	0	0		ENSG00000230601|ENST00000436752|TEX48	ENSG00000230601|ENST00000436752|TEX48	ENSG00000230601|ENST00000436752|TEX48	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.25115966796875	2	450.761092	899.507631	0.47896	0.00021589	-1.1112	-0.00050089	-0.63226	-0.000285	450.7606422987108	31.559	0.55489	31.666	31.548	32.102	0.10707					19	12	3	0	0	0	0.4196	1	2145	2145		68.787	5.4806	1	172290			22877	8731	15455	15465	26266	26266					0.053857848974644185
KPSVKPSS	8	Unmodified	_KPSVKPSS_					0	0	0			REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2446594238281	2	415.242535	828.470518	2.5965	0.0010782	2.9987	0.0012452	5.5952	0.0023234	415.2437470423347	107.1	0.79471	107.2	106.82	107.62	0.10395					75	27	5	0	0	0	0.884	1	13030	13030		33.516	0	1	2535100	+		22878	16548	15456	15466	26267	26267					0.049421133517171256
KPSVPLIKASR	11	Unmodified	_KPSVPLIKASR_					0	0	0		ENSG00000223611|ENST00000486479|SUPT20HL2	ENSG00000223611|ENST00000486479|SUPT20HL2	ENSG00000223611|ENST00000486479|SUPT20HL2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	598.3787841796875	2	598.379697	1194.74484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.96	1	22.042	21.542	22.542	0.081615								0	0	0	0.56276	1	639	639		31.634	8.1116	1				22879	8701	15457	15467	26268	26268					0.15525931110823876
KPSVTIQG	8	Unmodified	_KPSVTIQG_					0	0	0		ENST00000373887.7_1_9:123688504-123688848:-|nuORF	ENST00000373887.7_1_9:123688504-123688848:-|nuORF	ENST00000373887.7_1_9:123688504-123688848:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.245361328125	2	415.242535	828.470518	2.5965	0.0010782	2.9987	0.0012452	5.5952	0.0023234	415.2437470423347	107.1	0.79471	107.2	106.82	107.62	0.10395					75	27	5	0	0	0	0.85277	1	13064	13064		25.45	0	1	2535100			22880	10760	15458	15468	26269	26269					0.04942113351728494
KPTCLTLIV	9	Unmodified	_KPTCLTLIV_					0	0	0			REV__ENST00000504771.2_1_5:118691768-118728606:+|nuORF	REV__ENST00000504771.2_1_5:118691768-118728606:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.301025390625	2	494.298996	986.583439	0.76681	0.00037903	2.7292	0.001349	3.496	0.0017281	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.78536	1	10342	10342		29.15	1.2673	1	52135000	+		22881	27867	15459	15469	26270	26270					0.08961045753403596
KPTFFNVGNKQ	11	Unmodified	_KPTFFNVGNKQ_					0	0	0			REV__nc|ENSG00000087470|O00429-7|DNM1L	REV__nc|ENSG00000087470|O00429-7|DNM1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3463745117188	2	640.343312	1278.67207	2.7219	0.001743	2.203	0.0014107	4.925	0.0031537	640.344890509357	103.09	0.62273	103.04	102.7	103.32	-0.047005					51	14	6	0	0	0	0.55601	1	11272	11272		47.96	5.0953	1	3077100	+		22882	29718	15460	15470	26271	26271					0.04388177317400732
KPTFFNVGNKQ	11	Unmodified	_KPTFFNVGNKQ_					0	0	0			REV__nc|ENSG00000087470|O00429-7|DNM1L	REV__nc|ENSG00000087470|O00429-7|DNM1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3465576171875	2	640.343312	1278.67207	0.93987	0.00060184	3.9104	0.002504	4.8503	0.0031059	640.3460312358319	102.96	0.59602	103.09	102.81	103.4	0.12622					50	14	5	0	0	0	0.45992	1	10872	10872		54.722	1.7857	1	4886000	+		22883	29718	15460	15470	26272	26272					0.04388177317400732
KPTGMIRIH	9	Unmodified	_KPTGMIRIH_					0	0	0		nc|ENSG00000114013|P42081-6|CD86;nc|ENSG00000114013|P42081-3|CD86;ENSG00000114013|ENST00000330540|CD86;nc|ENSG00000114013|P42081-4|CD86	nc|ENSG00000114013|P42081-6|CD86	nc|ENSG00000114013|P42081-6|CD86	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.8082885742188	2	526.805311	1051.59607	3.1222	0.0016448	2.0164	0.0010623	5.1386	0.002707	526.8062549875466	101.13	2.204	101.08	100.09	102.29	-0.052116					131	51	4	0	0	0	0.41566	1	11016	11016		56.721	1.9447	1	2494300			22884	2756	15461	15471	26273	26273					0.07233501936298126
KPTGMIRIH	9	Unmodified	_KPTGMIRIH_					0	0	0		nc|ENSG00000114013|P42081-6|CD86;nc|ENSG00000114013|P42081-3|CD86;ENSG00000114013|ENST00000330540|CD86;nc|ENSG00000114013|P42081-4|CD86	nc|ENSG00000114013|P42081-6|CD86	nc|ENSG00000114013|P42081-6|CD86	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8076171875	2	526.805311	1051.59607	2.1591	0.0011374	1.94	0.001022	4.0991	0.0021594	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.44421	3	12263	12263;12323;12359		54.776	8.4045	1	36320000			22885	2756	15461	15471	26274;26275;26276	26274					0.07233501936298126
KPTGMIRIH	9	Unmodified	_KPTGMIRIH_					0	0	0		nc|ENSG00000114013|P42081-6|CD86;nc|ENSG00000114013|P42081-3|CD86;ENSG00000114013|ENST00000330540|CD86;nc|ENSG00000114013|P42081-4|CD86	nc|ENSG00000114013|P42081-6|CD86	nc|ENSG00000114013|P42081-6|CD86	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8070678710938	2	526.805311	1051.59607	2.4511	0.0012913	1.6759	0.00088286	4.127	0.0021741	526.8063545435555	100.49	2.2675	100.83	100.38	102.64	0.34591					144	58	4	0	0	0	0.28163	3	12306	12294;12306;12361		66.429	10.925	1	37709000			22886	2756	15461	15471	26277;26278;26279	26278					0.07233501936298126
KPTHSRTT	8	Unmodified	_KPTHSRTT_					0	0	0		ENSG00000182923|ENST00000675561|CEP63	ENSG00000182923|ENST00000675561|CEP63	ENSG00000182923|ENST00000675561|CEP63	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2536926269531	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.90837	1	8792	8792		56.721	14.325	1	1578600			22887	7483	15462	15472	26280	26280					0.027191324691784757
KPTIAPKPQL	10	Unmodified	_KPTIAPKPQL_					0	0	0			REV__ENST00000424518.5_1_12:54357896-54358059:-|nuORF	REV__ENST00000424518.5_1_12:54357896-54358059:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8402099609375	2	546.842416	1091.67028	-0.49529	-0.00027085	-3.9856	-0.0021795	-4.4809	-0.0024504	546.8402497724348	101.28	3.7061	101.28	100.69	104.39	0					228	91	5	0	0	0	0.42393	4	10263	10263;10275;10347;10357		62.107	21.329	1	22090000	+		22888	26520	15463	15473	26281;26282;26283;26284	26281					0.12811168299458586
KPTIAPKPQL	10	Unmodified	_KPTIAPKPQL_					0	0	0			REV__ENST00000424518.5_1_12:54357896-54358059:-|nuORF	REV__ENST00000424518.5_1_12:54357896-54358059:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8400268554688	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.51302	4	10580	10453;10560;10580;10628		54.776	15.523	1	44929000	+		22889	26520	15463	15473	26285;26286;26287;26288	26287					0.12811168299458586
KPTIATSC	8	Unmodified	_KPTIATSC_					0	0	0			REV__ENSG00000181785|ENST00000641320|OR5AS1	REV__ENSG00000181785|ENST00000641320|OR5AS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	410.71502685546875	2	410.715296	819.416039	-0.98938	-0.00040635	-3.1239	-0.001283	-4.1132	-0.0016894	410.7138082042183	61.763	0.50297	61.779	61.651	62.154	0.015724					23	17	2	0	0	0	0.8621	1	5394	5394		26.693	4.9906	1	280460	+		22890	22478	15464	15474	26289	26289					-0.000892217913587956
KPTIATSC	8	Unmodified	_KPTIATSC_					0	0	0			REV__ENSG00000181785|ENST00000641320|OR5AS1	REV__ENSG00000181785|ENST00000641320|OR5AS1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	410.715296	819.416039	-0.98938	-0.00040635	-3.1239	-0.001283	-4.1132	-0.0016894	410.7138082042183	61.763	0.50297	61.779	61.651	62.154	0.015724	-0.0070435	-0.00041551	NaN	26.693	23	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	280460	+		22891	22478	15464	15474							-0.000892217913587956
KPTIHLKRTN	10	Unmodified	_KPTIHLKRTN_					0	0	0			REV__ENST00000332070.7_1_X:133527609-133547529:+|nuORF	REV__ENST00000332070.7_1_X:133527609-133547529:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.366455078125	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.86106	1	11634	11634		33.922	9.4024	1	63350000	+		22892	25134	15465	15475	26290	26290					0.12459876308275852
KPTIHLKRTN	10	Unmodified	_KPTIHLKRTN_					0	0	0			REV__ENST00000332070.7_1_X:133527609-133547529:+|nuORF	REV__ENST00000332070.7_1_X:133527609-133547529:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.367919921875	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.41	1	114.39	113.89	114.89	-0.024452								0	0	0	0.45132	1	12676	12676		13.454	6.7185	1		+		22893	25134	15465	15475	26291	26291					0.12459876308275852
KPTIHLKRTN	10	Unmodified	_KPTIHLKRTN_					0	0	0			REV__ENST00000332070.7_1_X:133527609-133547529:+|nuORF	REV__ENST00000332070.7_1_X:133527609-133547529:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.36669921875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85834	1	12290	12290		22.58	0.61977	1	3346600	+		22894	25134	15465	15475	26292	26292					0.12459876308275852
KPTKSRAD	8	Unmodified	_KPTKSRAD_					0	0	0		ENST00000522911.5_1_8:97506246-97605724:+|nuORF	ENST00000522911.5_1_8:97506246-97605724:+|nuORF	ENST00000522911.5_1_8:97506246-97605724:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.75830078125	2	451.756341	901.498129	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.85	1	27.827	27.327	28.327	-0.023556								0	0	0	0.29755	1	1296	1296		24.203	0	1				22895	13195	15466	15476	26293	26293					0.04344016611935331
KPTKTMFEKGL	11	Unmodified	_KPTKTMFEKGL_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|55|1|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|55|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.35888671875	2	640.357573	1278.70059	0.92817	0.00059436	1.0646	0.00068171	1.9928	0.0012761	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.638	1	10323	10323		40.058	0	1	603720	+		22896	29636	15467	15477	26294	26294					0.07239158902348208
KPTLAVIGL	9	Unmodified	_KPTLAVIGL_					0	0	0		nc|ENSG00000293458|O60774|FMO6P	nc|ENSG00000293458|O60774|FMO6P	nc|ENSG00000293458|O60774|FMO6P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30126953125	2	456.299853	910.585153	0.12298	5.6116E-05	2.7993	0.0012773	2.9223	0.0013334	456.30098509136985	34.994	1.698	34.939	34.615	36.313	-0.055149					136	59	3	0	0	0	0.78058	1	1821	1821		30.504	3.7075	1	657240			22897	15354	15468	15478	26295	26295					0.1262842283365444
KPTLHRSISTK	11	Unmodified	_KPTLHRSISTK_					0	0	0		ENSG00000158286|ENST00000377939|RNF207;nc|ENSG00000158286|Q6ZRF8-4|RNF207;ENST00000492476.1_1_1:6271125-6272816:+|nuORF;ENST00000496676.5_1_1:6270020-6272770:+|nuORF	ENSG00000158286|ENST00000377939|RNF207	ENSG00000158286|ENST00000377939|RNF207	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.376220703125	2	634.377686	1266.74082	0.93377	0.00059237	-1.9058	-0.001209	-0.97203	-0.00061663	634.3763930733919	109.65	0.40929	109.73	109.41	109.82	0.078552					47	20	3	0	0	0	0.67778	1	11783	11783		35.152	0	1	6051800			22898	5468	15469	15479	26296	26296					0.11811841617122809
KPTLHRSISTK	11	Unmodified	_KPTLHRSISTK_					0	0	0		ENSG00000158286|ENST00000377939|RNF207;nc|ENSG00000158286|Q6ZRF8-4|RNF207;ENST00000492476.1_1_1:6271125-6272816:+|nuORF;ENST00000496676.5_1_1:6270020-6272770:+|nuORF	ENSG00000158286|ENST00000377939|RNF207	ENSG00000158286|ENST00000377939|RNF207	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3768310546875	2	634.377686	1266.74082	-1.1773	-0.00074688	0.036396	2.3089E-05	-1.1409	-0.00072379	634.3774291341157	112.05	1.1748	112.03	111.8	112.98	-0.019882					84	36	4	0	0	0	0.67778	1	11935	11935		35.152	2.3396	1	22589000			22899	5468	15469	15479	26297	26297					0.11811841617122809
KPTLSLDTD	9	Unmodified	_KPTLSLDTD_					0	0	0			REV__nc|ENSG00000111731|Q86YS7|C2CD5	REV__nc|ENSG00000111731|Q86YS7|C2CD5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.78021240234375	2	495.261122	988.507691	-0.59323	-0.00029381	2.2194	0.0010992	1.6262	0.0008054	495.26303169892276	86.828	0.42839	87.022	86.806	87.234	0.19379					14	9	2	0	0	0	0.20789	1	8568	8568		64.207	21.811	1	29792	+		22900	17893	15470	15480	26298	26298					0.012977401068042127
KPTNKASSTSL	11	Unmodified	_KPTNKASSTSL_					0	0	0		nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-4|NUP214;ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-5|NUP214	nc|ENSG00000126883|P35658-2|NUP214	nc|ENSG00000126883|P35658-2|NUP214	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3299560546875	2	567.311677	1132.6088	0.48206	0.00027348	-3.9315	-0.0022304	-3.4494	-0.0019569	567.8097983120093	91.887	0.42924	92.108	91.72	92.149	0.22157					14	9	2	0	0	0	0.17347	1	9233	9233		16.717	0	1	139510			22901	3477	15471	15481	26299	26299					0.04780191809527423
KPTNTYIGEDN	11	Unmodified	_KPTNTYIGEDN_					0	0	0		nc|ENSG00000139990|Q96JK2-2|DCAF5;nc|ENSG00000139990|Q96JK2-3|DCAF5;ENSG00000139990|ENST00000341516|DCAF5	nc|ENSG00000139990|Q96JK2-2|DCAF5	nc|ENSG00000139990|Q96JK2-2|DCAF5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.37939453125	2	626.296224	1250.5779	0.92617	0.00058006	2.3547	0.0014747	3.2809	0.0020548	626.2980069571536	105.64	0.57236	105.75	105.47	106.04	0.10766					27	14	3	0	0	0	0.17514	1	11308	11308		41.08	0	1	282740			22902	4408	15472	15482	26300	26300					-0.03737006295386891
KPTNVLNAS	9	Unmodified	_KPTNVLNAS_					0	0	0		ENSG00000162771|ENST00000294829|GARIN4	ENSG00000162771|ENST00000294829|GARIN4	ENSG00000162771|ENST00000294829|GARIN4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2875061035156	2	472.263999	942.513445	-0.91845	-0.00043375	1.6235	0.00076671	0.70502	0.00033296	472.26429427139874	95.189	0.492	95.42	95.267	95.759	0.23103					15	11	2	0	0	0	0.20789	1	9748	9748		60.118	8.9256	1	150830			22903	5734	15473	15483	26301	26301					0.03988883409135724
KPTPAAVPALP	11	Unmodified	_KPTPAAVPALP_					0	0	0		ENSG00000171956|ENST00000396057|FOXB1	ENSG00000171956|ENST00000396057|FOXB1	ENSG00000171956|ENST00000396057|FOXB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.3187866210938	2	531.321317	1060.62808	-0.6637	-0.00035264	-2.8491	-0.0015138	-3.5128	-0.0018664	531.319555565115	95.322	2.6544	95.322	94.812	97.466	0					162	61	5	0	0	0	0.72106	1	9470	9470		28.081	0.19925	1	1864100			22904	6727	15474	15484	26302	26302					0.1001919289108173
KPTPAAVPALP	11	Unmodified	_KPTPAAVPALP_					0	0	0		ENSG00000171956|ENST00000396057|FOXB1	ENSG00000171956|ENST00000396057|FOXB1	ENSG00000171956|ENST00000396057|FOXB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.3189697265625	2	531.321317	1060.62808	-0.033063	-1.7567E-05	-3.6466	-0.0019375	-3.6797	-0.0019551	531.3191547732448	95.172	2.5483	95.24	94.714	97.262	0.068336					181	59	5	0	0	0	0.5603	3	9922	9922;9969;10032		47.657	17.34	1	3878900			22905	6727	15474	15484	26303;26304;26305	26303					0.1001919289108173
KPTQTLMLT	9	Unmodified	_KPTQTLMLT_					0	0	0		ENST00000517302.1_14:106559729-106559831:-|nuORF	ENST00000517302.1_14:106559729-106559831:-|nuORF	ENST00000517302.1_14:106559729-106559831:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.793212890625	2	516.791535	1031.56852	0.99276	0.00051305	2.6742	0.001382	3.6669	0.001895	516.7928545442046	88.056	2.5505	88.505	87.601	90.152	0.44892					168	61	3	0	0	0	0.76764	1	10415	10415		34.173	5.023	1	584700			22906	13095	15475	15485	26306	26306					0.053995538853769176
KPTRAVNKIH	10	Unmodified	_KPTRAVNKIH_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4;ENSG00000105559|ENST00000263265|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3535766601562	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.64457	3	10789	10789;10935;10972		47.657	12.505	1	61091000			22907	14831	15476	15486	26307;26308;26309	26307					0.1186360713677459
KPTRAVNKIH	10	Unmodified	_KPTRAVNKIH_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4;ENSG00000105559|ENST00000263265|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353759765625	2	582.354014	1162.69348	3.1803	0.0018521	-4.2471	-0.0024733	-1.0667	-0.00062122	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.82886	2	11488	11450;11488		37.812	4.9991	1	77008000			22908	14831	15476	15486	26310;26311	26311					0.1186360713677459
KPTRAVNKIH	10	Unmodified	_KPTRAVNKIH_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4;ENSG00000105559|ENST00000263265|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3535766601562	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.89	1	114.86	114.36	115.36	-0.02433								0	0	0	0.45132	1	12732	12732		30.318	10.321	1				22909	14831	15476	15486	26312	26312					0.1186360713677459
KPTRAVNKIH	10	Unmodified	_KPTRAVNKIH_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4;ENSG00000105559|ENST00000263265|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3536376953125	2	582.354014	1162.69348	0.72245	0.00042072	-1.6748	-0.00097534	-0.95238	-0.00055462	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.85981	2	11222	11187;11222		35.152	13.192	1	132960000			22910	14831	15476	15486	26313;26314	26314					0.1186360713677459
KPTRAVNKIH	10	Unmodified	_KPTRAVNKIH_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4;ENSG00000105559|ENST00000263265|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3541870117188	2	582.354014	1162.69348	0.88325	0.00051437	-1.8039	-0.0010505	-0.92067	-0.00053616	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.86218	1	11353	11353		32.812	4.9302	1	125340000			22911	14831	15476	15486	26315	26315					0.1186360713677459
KPTRAVNKIH	10	Unmodified	_KPTRAVNKIH_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4;ENSG00000105559|ENST00000263265|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3538208007812	2	582.354014	1162.69348	-1.3468	-0.00078429	0.41376	0.00024096	-0.93299	-0.00054333	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.86471	1	11183	11183		30.318	3.6248	1	120000000			22912	14831	15476	15486	26316	26316					0.1186360713677459
KPTRAVNKIH	10	Unmodified	_KPTRAVNKIH_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4;ENSG00000105559|ENST00000263265|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.353759765625	2	582.354014	1162.69348	2.7406	0.001596	-3.1524	-0.0018358	-0.4118	-0.00023981	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.86047	2	12553	12553;12571		31.53	2.5758	1	7862700			22913	14831	15476	15486	26317;26318	26317					0.1186360713677459
KPTRGTSIK	9	Unmodified	_KPTRGTSIK_					0	0	0		ENSG00000165716|ENST00000371692|DIPK1B;nc|ENSG00000165716|Q5VUD6-2|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.3005065917969	2	494.300916	986.587279	-0.074576	-3.6863E-05	0.072745	3.5958E-05	-0.0018316	-9.0536E-07	494.3008543096205	101.11	1.0407	101.14	100.7	101.74	0.031029					60	24	4	0	0	0	0.7932	1	10776	10776		26.693	3.6504	1	661040			22914	6117	15477	15487	26319	26319					0.09344851571472645
KPTRGTSIK	9	Unmodified	_KPTRGTSIK_					0	0	0		ENSG00000165716|ENST00000371692|DIPK1B;nc|ENSG00000165716|Q5VUD6-2|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30084228515625	2	494.300916	986.587279	-0.58723	-0.00029027	0.13313	6.5808E-05	-0.4541	-0.00022446	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.78536	1	10303	10303		29.15	0	1	65263000			22915	6117	15477	15487	26320	26320					0.09344851571472645
KPTRGTSIK	9	Unmodified	_KPTRGTSIK_					0	0	0		ENSG00000165716|ENST00000371692|DIPK1B;nc|ENSG00000165716|Q5VUD6-2|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3010559082031	2	494.300916	986.587279	0.79689	0.0003939	-0.92973	-0.00045957	-0.13284	-6.5664E-05	494.3003729915352	100.82	1.5238	100.97	100.42	101.94	0.14352					78	36	3	0	0	0	0.74721	1	10557	10557		37.159	5.2042	1	706980			22916	6117	15477	15487	26321	26321					0.09344851571472645
KPTRGTSIK	9	Unmodified	_KPTRGTSIK_					0	0	0		ENSG00000165716|ENST00000371692|DIPK1B;nc|ENSG00000165716|Q5VUD6-2|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	494.300916	986.587279	2.7056	0.0013374	-2.6957	-0.0013325	0.0099089	4.898E-06	494.29950549644497	101.05	1.1292	100.99	100.4	101.53	-0.052116	-0.030633	-0.0022225	NaN	37.159	65	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	623970			22917	6117	15477	15487							0.09344851571472645
KPTRGTSIK	9	Unmodified	_KPTRGTSIK_					0	0	0		ENSG00000165716|ENST00000371692|DIPK1B;nc|ENSG00000165716|Q5VUD6-2|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	494.300916	986.587279	-0.67495	-0.00033363	0.57188	0.00028268	-0.10307	-5.0948E-05	494.3010949420444	100.88	1.208	100.92	100.47	101.68	0.046356	-0.1016	0.0010078	NaN	37.159	71	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	545700			22918	6117	15477	15487							0.09344851571472645
KPTRGTSIK	9	Unmodified	_KPTRGTSIK_					0	0	0		ENSG00000165716|ENST00000371692|DIPK1B;nc|ENSG00000165716|Q5VUD6-2|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	494.300916	986.587279	1.1735	0.00058004	-1.1505	-0.00056871	0.022927	1.1333E-05	494.30041914954836	100.65	1.0025	100.95	100.41	101.41	0.2999	-0.076669	-0.00069501	NaN	37.159	51	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	222410			22919	6117	15477	15487							0.09344851571472645
KPTRGTSIK	9	Unmodified	_KPTRGTSIK_					0	0	0		ENSG00000165716|ENST00000371692|DIPK1B;nc|ENSG00000165716|Q5VUD6-2|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	494.300916	986.587279	2.0723	0.0010243	-1.9274	-0.00095271	0.1449	7.1625E-05	494.29989802669576	100.59	0.81117	100.93	100.61	101.42	0.34591	-0.094533	-0.001463	NaN	37.159	36	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	244850			22920	6117	15477	15487							0.09344851571472645
KPTRKENPRV	10	Unmodified	_KPTRKENPRV_					0	0	0		ENST00000563480.6_2_15:66782707-66786755:-|nuORF;ENST00000565387.2_1_15:66782707-66784420:-|nuORF	ENST00000563480.6_2_15:66782707-66786755:-|nuORF	ENST00000563480.6_2_15:66782707-66786755:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	612.879638671875	2	612.862203	1223.70985	-0.12435	-7.6211E-05	-0.39868	-0.00024434	-0.52303	-0.00032055	612.8618182975246	104.93	0.2033	104.93	104.79	104.99	0					8	4	2	0	0	0	0.37624	1	10820	10820		42.864	2.8061	1	238240			22921	13871	15478	15488	26322	26322					0.10694688302874056
KPTRKGGP	8	Unmodified	_KPTRKGGP_					0	0	0			REV__nc|ENSG00000147655|Q6UXX9-2|RSPO2	REV__nc|ENSG00000147655|Q6UXX9-2|RSPO2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7549743652344	2	420.756144	839.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.483	1	21.04	20.54	21.54	-0.44324								0	0	0	0.29631	1	781	781		25.45	1.2474	1		+		22922	20083	15479	15489	26323	26323					0.07156641682752252
KPTSKKPVF	9	Unmodified	_KPTSKKPVF_					0	0	0			REV__ENSG00000154736|ENST00000284987|ADAMTS5	REV__ENSG00000154736|ENST00000284987|ADAMTS5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3145751953125	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.7724	-0.0014314	-4.3342	-0.0022378	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.69624	2	10404	10404;10428		40.778	12.697	1	66055000	+		22923	20398	15480	15490	26324;26325	26324					0.10343210236646883
KPTSPPNEEF	10	Unmodified	_KPTSPPNEEF_					0	0	0		chr1:103001201-103001925|21|12.43|0.2|5.95|-|ENST00000645458|COL11A1,COL11A1;chr1:103025613-103025800|13|11.15|0.08|7.04|-|ENST00000461720|COL11A1,COL11A1;nc|ENSG00000060718|P12107-3|COL11A1;chr1:103025613-103031116|13|10.54|0.04|7.98|-|ENST00000353414|COL11A1,COL11A1;ENSG00000060718|ENST00000370096|COL11A1;nc|ENSG00000060718|P12107-2|COL11A1	chr1:103001201-103001925|21|12.43|0.2|5.95|-|ENST00000645458|COL11A1,COL11A1	chr1:103001201-103001925|21|12.43|0.2|5.95|-|ENST00000645458|COL11A1,COL11A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.2769165039062	2	573.277303	1144.54005	-0.33774	-0.00019362	0.71802	0.00041163	0.38028	0.00021801	573.2777323239757	24.906	0.57835	24.957	24.664	25.242	0.050451					25	17	2	0	0	0	0.78666	1	957	957		40.058	5.8856	1	70108			22924	16	15481	15491	26326	26326					-0.026434724901946538
KPTTSRLKQPL	11	Unmodified	_KPTTSRLKQPL_					0	0	0		ENSG00000164828|ENST00000401592|SUN1;nc|ENSG00000164828|O94901-9|SUN1;nc|ENSG00000164828|O94901-6|SUN1;ENST00000413171.6_1_7:892397-912965:+|nuORF;nc|ENSG00000164828|O94901-5|SUN1;ENST00000475971.5_1_7:892397-892598:+|nuORF	ENSG00000164828|ENST00000401592|SUN1	ENSG00000164828|ENST00000401592|SUN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.8933715820312	2	634.887887	1267.76122	2.7957	0.0017749	4.3447	0.0027584	7.1403	0.0045333	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.60058	2	11759	11759;11831		44.377	2.9506	1	42597000			22925	6008	15482	15492	26327;26328	26327					0.13805012276952766
KPTTTKKNTT	10	Unmodified	_KPTTTKKNTT_					0	0	0			REV__nc|ENSG00000138193|Q9P212-2|PLCE1	REV__nc|ENSG00000138193|Q9P212-2|PLCE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3403930664062	2	560.322045	1118.62954	-1.1264	-0.00063117	1.1167	0.00062569	-0.0097753	-5.4773E-06	560.3226704524009	102.45	0.43781	102.47	102.32	102.76	0.01989					21	10	3	0	0	0	0.37624	1	10986	10986		35.152	13.192	1	541170	+		22926	19450	15483	15493	26329	26329					0.07496782189195983
KPTVEYKE	8	Unmodified	_KPTVEYKE_					0	0	0		ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.267333984375	2	497.266207	992.517862	-1.0651	-0.00052965	1.9323	0.00096086	0.86716	0.00043121	497.2669260284884	27.702	0.91206	27.605	27.272	28.184	-0.096947					46	20	4	0	0	0	0.72312	2	1619	1619;1633		66.429	3.3696	1	425880			22927	6335	15484	15494	26330;26331	26330					0.021303478320419345
KPTVIAPCV	9	Unmodified	_KPTVIAPCV_					0	0	0			REV__ENST00000264144.4_1_1:183177117-183184644:+|nuORF	REV__ENST00000264144.4_1_1:183177117-183184644:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2535095214844	2	464.270238	926.525924	0.92001	0.00042713	3.4758	0.0016137	4.3958	0.0020408	464.27159735638236	86.125	1.5827	86.051	85.234	86.817	-0.073761					47	36	2	0	0	0	0.20789	1	8755	8755		42.396	21.449	1	75365	+		22928	24466	15485	15495	26332	26332					0.05972203547810295
KPTVIRRNRR	10	Unmodified	_KPTVIRRNRR_					0	0	0		nc|ENSG00000163618|Q9ULU8-5|CADPS	nc|ENSG00000163618|Q9ULU8-5|CADPS	nc|ENSG00000163618|Q9ULU8-5|CADPS	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3929443359375	2	648.410186	1294.80582	2.647	0.0017164	-1.486	-0.00096353	1.161	0.00075283	648.9100903204119	107.74	0.21605	107.71	107.55	107.77	-0.031487					5	4	2	0	0	0	0.37624	1	11948	11948		19.104	2.6304	1	187130			22929	15050	15486	15496	26333	26333					0.17020880933614535
KPTVLIYFTDV	11	Unmodified	_KPTVLIYFTDV_					0	0	0			REV__ENST00000265866.11_1_10:70101967-70102084:+|nuORF	REV__ENST00000265866.11_1_10:70101967-70102084:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3922729492188	2	648.365921	1294.71729	0.94444	0.00061234	1.2218	0.00079215	2.1662	0.0014045	648.3666303413443	107.05	0.4107	107.14	106.78	107.19	0.091255					14	9	2	0	0	0	0.17415	1	11428	11428		20.837	0	1	495390	+		22930	24500	15487	15497	26334	26334					0.0817198305992406
KPTVQIIL	8	Unmodified	_KPTVQIIL_					0	0	0			REV__nc|ENSG00000162692|P19320-2|VCAM1	REV__nc|ENSG00000162692|P19320-2|VCAM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30120849609375	2	456.299853	910.585153	1.12	0.00051105	1.6845	0.00076862	2.8045	0.0012797	456.3004764571391	34.144	1.6348	34.449	34.076	35.711	0.30495					98	40	4	0	0	0	0.93786	1	2548	2548		53.351	3.9099	1	1747200	+		22931	20836	15488	15498	26335	26335					0.1262842283365444
KPVATFRLK	9	Unmodified	_KPVATFRLK_					0	0	0			REV__nc|ENSG00000175164|P16442|ABO	REV__nc|ENSG00000175164|P16442|ABO	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.3358154296875	2	530.337301	1058.66005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.095	1	15.496	14.996	15.996	-0.59873								0	0	0	0.30416	1	87	87		29.15	8.2026	1		+		22932	22043	15489	15499	26336	26336					0.13306605364869029
KPVFSQPEGYD	11	Unmodified	_KPVFSQPEGYD_					0	0	0		nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4;ENSG00000196159|ENST00000394329|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.207763671875	3	422.871549	1265.59282	0.94033	0.00039764	3.2746	0.0013847	4.215	0.0017824	422.873033570249	18.39	0.13993	17.913	17.843	17.983	-0.47694					4	2	2	0	0	0	0.74771	1	387	387		22.562	1.5294	1	26183			22933	8020	15490	15500	26337	26337					-0.029355144273722544
KPVGILIA	8	Unmodified	_KPVGILIA_					0	0	0		ENST00000339437.10_1_3:3171710-3171836:+|nuORF	ENST00000339437.10_1_3:3171710-3171836:+|nuORF	ENST00000339437.10_1_3:3171710-3171836:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2568664550781	2	405.776014	809.537475	0.63702	0.00025849	3.4092	0.0013834	4.0462	0.0016418	405.77707669420784	32.634	0.55399	32.845	32.465	33.019	0.21168					21	12	2	0	0	0	0.4196	1	2329	2329		8.8223	4.1406	1	70828			22934	10222	15491	15501	26338	26338					0.12508768633460932
KPVGILIA	8	Unmodified	_KPVGILIA_					0	0	0		ENST00000339437.10_1_3:3171710-3171836:+|nuORF	ENST00000339437.10_1_3:3171710-3171836:+|nuORF	ENST00000339437.10_1_3:3171710-3171836:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	405.776014	809.537475	1.0923	0.00044325	2.8509	0.0011568	3.9432	0.0016001	405.7769206936617	32.614	0.6431	32.74	32.375	33.018	0.12642	-0.05261	-0.00016923	NaN	8.8223	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67203			22935	10222	15491	15501							0.12508768633460932
KPVIREKET	9	Unmodified	_KPVIREKET_					0	0	0			REV__ENST00000498256.1_1_8:29489773-29490157:+|nuORF	REV__ENST00000498256.1_1_8:29489773-29490157:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.3269653320312	2	550.327131	1098.63971	1.2755	0.00070194	-1.1938	-0.00065698	0.081698	4.4961E-05	550.3264981095151	100.02	1.2719	100.07	99.504	100.78	0.047523					72	28	3	0	0	0	0.76255	1	10723	10723		35.618	10.044	1	456100	+		22936	27785	15492	15502	26339	26339					0.09433389914420331
KPVKEEKM	8	Unmodified	_KPVKEEKM_					0	0	0		nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;ENSG00000008128|ENST00000404249|CDK11A;ENST00000598846.1_1_1:1636463-1654047:-|nuORF;nc|ENSG00000248333|P21127-10|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;ENSG00000248333|ENST00000341832|CDK11B;nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-3|CDK11B	nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000248333|P21127-6|CDK11B	nc|ENSG00000008128|Q9UQ88-9|CDK11A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.78033447265625	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.882	1	86.031	85.531	86.531	0.1488								0	0	0	0.29264	1	8422	8422		29.15	1.2673	1				22937	736;15285	15493	15503	26340	26340					0.0480328471392113
KPVPKSSSLL	10	Unmodified	_KPVPKSSSLL_					0	0	0			REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.32958984375	2	528.326599	1054.63865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.984	1	65.022	64.522	65.522	0.037849								0	0	0	0.45132	1	5752	5752		24.519	5.1592	1		+		22938	20827	15494	15504	26341	26341					0.11351175545541992
KPVPLLSP	8	Unmodified	_KPVPLLSP_					0	0	0			REV__ENST00000433094.1_1_20:46994536-46995317:+|nuORF	REV__ENST00000433094.1_1_20:46994536-46995317:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.7748107910156	2	425.773471	849.53239	0.17703	7.5374E-05	3.2935	0.0014023	3.4705	0.0014777	425.7747914132181	38.924	1.3455	39.012	38.418	39.764	0.088371					149	38	5	0	0	0	0.80706	1	2340	2340		19.36	4.6959	1	14185000	+		22939	26644	15495	15505	26342	26342					0.10160464770854105
KPVPVLLGSLL	11	Unmodified	_KPVPVLLGSLL_					0	0	0		nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;nc|ENSG00000167634|Q8WX94|NLRP7;nc|ENSG00000167634|Q8WX94-2|NLRP7;ENSG00000167634|ENST00000588756|NLRP7;nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2	nc|ENSG00000022556|Q9NX02-3|NLRP2	nc|ENSG00000022556|Q9NX02-3|NLRP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8535766601562	2	568.376092	1134.73763	0.86999	0.00049448	2.9525	0.0016781	3.8225	0.0021726	568.8784460556877	102.4	0.52706	102.53	102.37	102.9	0.13523					28	12	3	0	0	0	0.17318	1	10828	10828		19.104	8.8383	1	649130			22940	851	15496	15506	26343	26343					0.17565198510442315
KPVRRRLKSE	10	Unmodified	_KPVRRRLKSE_					0	0	0		nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;ENSG00000135597|ENST00000450536|REPS1	nc|ENSG00000135597|Q96D71-2|REPS1	nc|ENSG00000135597|Q96D71-2|REPS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	424.3144226074219	3	423.601839	1267.78369	0.012695	5.3775E-06	-3.9892	-0.0016899	-3.9765	-0.0016845	423.59969425464925	18.443	0.25154	18.509	18.308	18.559	0.066296					15	12	2	0	0	0	0.37624	1	335	335		20.03	9.9266	1	42397			22941	4036	15497	15507	26344	26344					0.16050656465222346
KPVSASLQ	8	Unmodified	_KPVSASLQ_					0	0	0			REV__ENSG00000105738|ENST00000222345|SIPA1L3	REV__ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2448425292969	2	415.242535	828.470518	2.5965	0.0010782	2.9987	0.0012452	5.5952	0.0023234	415.2437470423347	107.1	0.79471	107.2	106.82	107.62	0.10395					75	27	5	0	0	0	0.84341	1	13051	13051		24.203	1.1603	1	2535100	+		22942	17567	15498	15508	26345	26345					0.049421133517171256
KPVSKKHGKLI	11	Unmodified	_KPVSKKHGKLI_					0	0	0		nc|ENSG00000134909|A7KAX9|ARHGAP32;ENSG00000134909|ENST00000682385|ARHGAP32;nc|ENSG00000134909|A7KAX9-3|ARHGAP32;ENST00000533509.1_1_11:128855854-128936700:-|nuORF	nc|ENSG00000134909|A7KAX9|ARHGAP32	nc|ENSG00000134909|A7KAX9|ARHGAP32	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	617.9859008789062	2	617.90334	1233.79213	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.238	1	24.336	23.836	24.836	0.097855								0	0	0	0.56276	1	822	822		37.812	21.094	1				22943	3971	15499	15509	26346	26346					0.18458210381845674
KPVSLLEERK	10	Unmodified	_KPVSLLEERK_					0	0	0			REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.8599243164062	2	599.861338	1197.70812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.85	1	119.82	119.32	120.32	-0.024033								0	0	0	0.45132	1	13274	13274		14.865	0.72775	1		+		22944	30240	15500	15510	26347	26347					0.11717634494266349
KPVSTTSK	8	Unmodified	_KPVSTTSK_					0	0	0		nc|ENSG00000152990|Q8IWK6-3|ADGRA3;ENSG00000152990|ENST00000334304|ADGRA3	nc|ENSG00000152990|Q8IWK6-3|ADGRA3	nc|ENSG00000152990|Q8IWK6-3|ADGRA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.2501525878906	2	424.247818	846.481082	2.718	0.0011531	2.5033	0.001062	5.2214	0.0022152	424.24890535908264	107.33	0.96184	107.3	106.88	107.84	-0.034134					71	22	4	0	0	0	0.87922	1	11860	11860		31.955	1.6371	1	4480000			22945	5206	15501	15511	26348	26348					0.05170096006145286
KPVSTTSK	8	Unmodified	_KPVSTTSK_					0	0	0		nc|ENSG00000152990|Q8IWK6-3|ADGRA3;ENSG00000152990|ENST00000334304|ADGRA3	nc|ENSG00000152990|Q8IWK6-3|ADGRA3	nc|ENSG00000152990|Q8IWK6-3|ADGRA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	424.2502136230469	2	424.247818	846.481082	0.7342	0.00031148	4.3955	0.0018648	5.1297	0.0021763	424.2497618988356	107.12	1.1041	107.22	106.78	107.88	0.091255					91	26	5	0	0	0	0.87922	1	11482	11482		31.955	0.37597	1	9522100			22946	5206	15501	15511	26349	26349					0.05170096006145286
KPVSTTSK	8	Unmodified	_KPVSTTSK_					0	0	0		nc|ENSG00000152990|Q8IWK6-3|ADGRA3;ENSG00000152990|ENST00000334304|ADGRA3	nc|ENSG00000152990|Q8IWK6-3|ADGRA3	nc|ENSG00000152990|Q8IWK6-3|ADGRA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.2506408691406	2	424.247818	846.481082	4.6708	0.0019816	1.0302	0.00043705	5.701	0.0024186	424.2483274707268	107.02	1.3116	107.17	106.66	107.97	0.14929					169	50	5	0	0	0	0.8347	2	13082	13082;13118		31.955	0.37597	1	20368000			22947	5206	15501	15511	26350;26351	26350					0.05170096006145286
KPVTQLLI	8	Unmodified	_KPVTQLLI_					0	0	0			REV__ENSG00000170385|ENST00000367001|SLC30A1	REV__ENSG00000170385|ENST00000367001|SLC30A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30078125	2	456.299853	910.585153	-0.23513	-0.00010729	2.1872	0.000998	1.952	0.00089071	456.3007121817001	45.145	1.6994	45.141	44.498	46.198	-0.0041618					86	39	3	0	0	0	0.87064	1	3629	3629		29.15	0	1	438290	+		22948	21655	15502	15512	26352	26352					0.1262842283365444
KPVVLKVE	8	Unmodified	_KPVVLKVE_					0	0	0		ENSG00000160868|ENST00000651514|CYP3A4	ENSG00000160868|ENST00000651514|CYP3A4	ENSG00000160868|ENST00000651514|CYP3A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3013916015625	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.81897	1	2123	2123		20.947	2.6225	1	1220600			22949	5611	15503	15513	26353	26353					0.1262842283366581
KPVVSAPRFLK	11	Unmodified	_KPVVSAPRFLK_					0	0	0		ENST00000272793.9_1_2:170930100-170936486:+|nuORF	ENST00000272793.9_1_2:170930100-170936486:+|nuORF	ENST00000272793.9_1_2:170930100-170936486:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.392822265625	2	621.390065	1240.76558	2.9766	0.0018496	1.2761	0.00079293	4.2527	0.0026426	621.3907359645153	104.71	2.7313	104.66	104.1	106.83	-0.04039					247	64	5	0	0	0	0.7434	1	11459	11459		23.523	0.94304	1	12926000			22950	9571	15504	15514	26354	26354					0.15482521490503132
KPWKGLKYN	9	Unmodified	_KPWKGLKYN_					0	0	0		ENSG00000128394|ENST00000308521|APOBEC3F	ENSG00000128394|ENST00000308521|APOBEC3F	ENSG00000128394|ENST00000308521|APOBEC3F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3291625976562	2	567.326934	1132.63931	2.937	0.0016662	2.4805	0.0014072	5.4174	0.0030735	567.3281928791553	117.74	0.69537	117.71	117.25	117.94	-0.02433					30	23	2	0	0	0	0.78058	1	13027	13027		30.504	1.3541	1	79498			22951	3540	15505	15515	26355	26355					0.07830014985233902
KPYRRPKFCRK	11	Unmodified	_KPYRRPKFCRK_					0	0	0		ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.6199035644531	3	493.622357	1477.84524	-0.71922	-0.00035502	-1.6954	-0.00083687	-2.4146	-0.0011919	493.6213113585242	30.757	0.97104	30.82	30.436	31.408	0.063122					105	47	4	0	0	0	0.76579	1	1360	1360		18.531	5.0231	1	228820			22952	5685	15506	15516	26356	26356					0.12543264892838124
KQAGEDGGD	9	Unmodified	_KQAGEDGGD_					0	0	0		ENST00000442031.1_1_X:51665090-51665543:-|nuORF	ENST00000442031.1_1_X:51665090-51665543:-|nuORF	ENST00000442031.1_1_X:51665090-51665543:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2635192871094	2	438.688321	875.362089	1.6242	0.00071253	3.3757	0.0014809	5	0.0021934	438.6906775610565	35.543	0.15127	35.924	35.825	35.977	0.3812					5	3	2	0	0	0	0.20789	1	2737	2737		13.454	0	1	43734			22953	11790	15507	15517	26357	26357					-0.08057722689375169
KQAHVPMVLGH	11	Unmodified	_KQAHVPMVLGH_					0	0	0			REV__ENSG00000205108|ENST00000378788|FAM205A	REV__ENSG00000205108|ENST00000378788|FAM205A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.8368530273438	2	608.8346	1215.65465	2.5696	0.0015645	2.2749	0.0013851	4.8445	0.0029495	608.8359461538699	110.06	0.58868	110.12	109.94	110.52	0.054062					49	20	3	0	0	0	0.71452	1	13312	13312		29.15	2.4566	1	4210900	+		22954	23541	15508	15518	26358	26358					0.05544558510769093
KQALDIPGTS	10	Unmodified	_KQALDIPGTS_					0	0	0			REV__nc|ENSG00000136114|Q9NS62-3|THSD1	REV__nc|ENSG00000136114|Q9NS62-3|THSD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.814208984375	2	515.282389	1028.55022	0.82933	0.00042734	-4.3769	-0.0022553	-3.5476	-0.001828	515.782231928586	16.53	0.50401	16.043	15.779	16.283	-0.48718					13	10	2	0	0	0	0.37624	1	160	160		31.53	0	1	19579	+		22955	19288	15509	15519	26359	26359					0.03709135235044414
KQALKKLDNVR	11	Unmodified	_KQALKKLDNVR_					0	0	0		ENST00000557380.5_1_14:50292586-50301128:-|nuORF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF;nc|ENSG00000165525|O60524-3|NEMF;ENSG00000165525|ENST00000298310|NEMF	ENST00000557380.5_1_14:50292586-50301128:-|nuORF	ENST00000557380.5_1_14:50292586-50301128:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2730712890625	3	438.273499	1311.79867	-0.15875	-6.9576E-05	-0.97566	-0.00042761	-1.1344	-0.00049718	438.2729904466262	106.56	0.95083	106.53	106.1	107.05	-0.025146					93	21	6	0	0	0	0.72892	1	11560	11560		26.75	3.3718	1	4356100			22956	6091	15510	15520	26360	26360					0.15524103542543344
KQALKKLDNVR	11	Unmodified	_KQALKKLDNVR_					0	0	0		ENST00000557380.5_1_14:50292586-50301128:-|nuORF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF;nc|ENSG00000165525|O60524-3|NEMF;ENSG00000165525|ENST00000298310|NEMF	ENST00000557380.5_1_14:50292586-50301128:-|nuORF	ENST00000557380.5_1_14:50292586-50301128:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.27288818359375	3	438.273499	1311.79867	2.7278	0.0011955	-3.9418	-0.0017276	-1.2141	-0.00053209	438.27166879991887	107.29	1.1275	107.26	106.75	107.88	-0.034134					106	26	5	0	0	0	0.73277	1	11942	11942		25.892	0	1	5019700			22957	6091	15510	15520	26361	26361					0.15524103542543344
KQARTELSKQ	10	Unmodified	_KQARTELSKQ_					0	0	0			REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.8380737304688	2	594.838394	1187.66223	-0.53383	-0.00031754	0.49418	0.00029396	-0.039656	-2.3589E-05	594.838563228105	27.728	0.52662	27.631	27.403	27.929	-0.096945					30	11	3	0	0	0	0.35939	1	1626	1626		67.494	1.6905	1	575870	+		22958	21287	15511	15521	26362	26362					0.07590989312029706
KQARVTGG	8	Unmodified	_KQARVTGG_					0	0	0		ENST00000426597.2_1_1:32705501-32706166:-|nuORF	ENST00000426597.2_1_1:32705501-32706166:-|nuORF	ENST00000426597.2_1_1:32705501-32706166:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7396240234375	2	408.737951	815.46135	-0.071529	-2.9237E-05	4.315	0.0017637	4.2434	0.0017344	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.7961	1	2038	2038		17.365	0	1	1654100			22959	11559	15512	15522	26363	26363					0.04623764786060747
KQCPAAALRVA	11	Unmodified	_KQCPAAALRVA_					0	0	0			REV__ENSG00000170745|ENST00000304101|KCNS3	REV__ENSG00000170745|ENST00000304101|KCNS3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	564.3162841796875	2	564.321325	1126.6281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.131	1	57.164	56.664	57.664	0.033184								0	0	0	0.56276	1	5188	5188		25.574	2.0514	1		+		22960	21683	15513	15523	26364	26364					0.0698486961944127
KQDIKPSRSSA	11	Unmodified	_KQDIKPSRSSA_					0	0	0			REV__ENSG00000117616|ENST00000243189|RSRP1	REV__ENSG00000117616|ENST00000243189|RSRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.837158203125	2	608.835851	1215.65715	-0.43425	-0.00026439	2.438	0.0014843	2.0037	0.0012199	608.8372155374379	110.58	1.0111	110.52	110.29	111.3	-0.055084					101	32	4	0	0	0	0.7144	1	12015	12015		29.17	5.6474	1	4475900	+		22961	18273	15514	15524	26365	26365					0.05794685449427561
KQEAFGFLLLN	11	Unmodified	_KQEAFGFLLLN_					0	0	0			REV__ENST00000301781.10_1_11:62457841-62462085:-|nuORF	REV__ENST00000301781.10_1_11:62457841-62462085:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3593139648438	2	640.355888	1278.69722	1.6035	0.0010268	3.0485	0.0019521	4.652	0.0029789	640.3577368030512	99.407	2.6879	99.454	98.409	101.1	0.047531					162	62	4	0	0	0	0.66929	1	10674	10674		36.447	2.5251	1	584870	+		22962	24772	15515	15525	26366	26366					0.06902232120000917
KQECKIKYSER	11	Unmodified	_KQECKIKYSER_					0	0	0		nc|ENSG00000107758|P16298-2|PPP3CB;nc|ENSG00000107758|P16298-3|PPP3CB;ENSG00000107758|ENST00000360663|PPP3CB;nc|ENSG00000107758|P16298-4|PPP3CB;nc|ENSG00000138814|Q08209-5|PPP3CA;nc|ENSG00000138814|Q08209-3|PPP3CA;nc|ENSG00000138814|Q08209-2|PPP3CA;ENSG00000138814|ENST00000394854|PPP3CA	nc|ENSG00000107758|P16298-2|PPP3CB	nc|ENSG00000107758|P16298-2|PPP3CB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.2524108886719	3	471.250254	1410.72893	-0.70099	-0.00033034	0.77052	0.00036311	0.069531	3.2767E-05	471.25078380098626	31.32	0.62266	31.309	31.137	31.76	-0.010656					19	14	2	0	0	0	0.75457	1	1713	1713		21.032	1.0018	1	39212			22963	2366	15516	15526	26367	26367					0.039998568116061506
KQEMVDIIE	9	Unmodified	_KQEMVDIIE_					0	0	0		ENST00000586612.1_1_18:77733687-77746603:-|nuORF;ENST00000355491.5_1_18:77733687-77736734:-|nuORF;ENSG00000141759|ENST00000269601|TXNL4A	ENST00000586612.1_1_18:77733687-77746603:-|nuORF	ENST00000586612.1_1_18:77733687-77746603:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.3143310546875	2	552.783907	1103.55326	-0.13933	-7.702E-05	-0.4637	-0.00025633	-0.60303	-0.00033335	552.7836105413012	75.187	0.61252	75.752	75.413	76.026	0.56458					22	14	2	0	0	0	0.20789	1	8522	8522		58.782	14.405	1	239090			22964	4529	15517	15527	26368	26368					0.005626422975410605
KQEQAMLALLK	11	Unmodified	_KQEQAMLALLK_					0	0	0			REV__ENSG00000068654|ENST00000263857|POLR1A	REV__ENSG00000068654|ENST00000263857|POLR1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.91754150390625	3	424.916324	1271.72714	2.4551	0.0010432	0.71009	0.00030173	3.1652	0.0013449	424.9166073227166	25.134	0.57406	24.703	24.408	24.983	-0.4311					31	12	3	0	0	0	0.72892	1	1288	1288		26.75	0	1	264060	+		22965	16562	15518	15528	26369	26369					0.10214847793668014
KQEVDVKELVK	11	Unmodified	_KQEVDVKELVK_					0	0	0			REV__ENST00000558351.5_1_15:41556426-41571584:+|nuORF	REV__ENST00000558351.5_1_15:41556426-41571584:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.920654296875	3	438.925765	1313.75547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.003	1	18.003	17.503	18.503	0								0	0	0	0.56276	1	261	261		27.644	3.4121	1		+		22966	22915	15519	15529	26370	26370					0.11113868974598518
KQFQKVITE	9	Unmodified	_KQFQKVITE_					0	0	0		ENSG00000197157|ENST00000354725|SND1;ENST00000489417.5_1_7:127726971-127732107:+|nuORF	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.34033203125	2	560.821681	1119.62881	-0.57958	-0.00032504	-2.7608	-0.0015483	-3.3404	-0.0018734	560.8200679824707	90.661	2.6328	90.661	89.128	91.761	0					124	61	3	0	0	0	0.20789	1	8704	8704		31.53	0	1	244750			22967	8142	15520	15530	26371	26371					0.07377987540144204
KQGEESRSG	9	Unmodified	_KQGEESRSG_					0	0	0		chr2:100104518-100104668|35|26.0|0.4|6.01|-|ENST00000672269|AFF3,AFF3;ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3	chr2:100104518-100104668|35|26.0|0.4|6.01|-|ENST00000672269|AFF3,AFF3	chr2:100104518-100104668|35|26.0|0.4|6.01|-|ENST00000672269|AFF3,AFF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.2364501953125	2	489.23597	976.457387	-0.71864	-0.00035159	1.6081	0.00078672	0.88941	0.00043513	489.2367667655941	86.159	1.8924	86.606	85.945	87.837	0.44736					116	45	5	0	0	0	0.51592	1	10176	10176		51.193	10.415	1	3138400			22968	302	15521	15531	26372	26372					-0.031783694983232635
KQGKVKTQ	8	Unmodified	_KQGKVKTQ_					0	0	0		ENSG00000166685|ENST00000299886|COG1	ENSG00000166685|ENST00000299886|COG1	ENSG00000166685|ENST00000299886|COG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.7822265625	2	458.782359	915.550165	-0.3365	-0.00015438	0.68553	0.00031451	0.34903	0.00016013	458.7825063546578	21.176	0.73717	21.112	20.86	21.597	-0.064743					60	28	3	0	0	0	0.5397	1	604	604		73.975	10.668	1	345540			22969	6220	15522	15532	26373	26373					0.08901180025713984
KQGPLRTSA	9	Unmodified	_KQGPLRTSA_					0	0	0		nc|ENSG00000258436|Q7Z5J4-2|RAI1;ENSG00000108557|ENST00000353383|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2774353027344	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.69624	1	8289	8289		40.778	1.5253	1	4644500			22970	2417	15523	15533	26374	26374					0.060319920203255606
KQGPLRTSA	9	Unmodified	_KQGPLRTSA_					0	0	0		nc|ENSG00000258436|Q7Z5J4-2|RAI1;ENSG00000108557|ENST00000353383|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27777099609375	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.77244	1	8818	8818		32.812	0.061884	1	7289200			22971	2417	15523	15533	26375	26375					0.060319920203255606
KQGPLRTSA	9	Unmodified	_KQGPLRTSA_					0	0	0		nc|ENSG00000258436|Q7Z5J4-2|RAI1;ENSG00000108557|ENST00000353383|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27734375	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.74721	1	10156	10156		37.159	0	1	5642300			22972	2417	15523	15533	26376	26376					0.060319920203255606
KQHEGLATFY	10	Unmodified	_KQHEGLATFY_					0	0	0		nc|ENSG00000174840|Q6L8Q7-2|PDE12;ENSG00000174840|ENST00000311180|PDE12	nc|ENSG00000174840|Q6L8Q7-2|PDE12	nc|ENSG00000174840|Q6L8Q7-2|PDE12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8014526367188	2	597.301113	1192.58767	-0.57062	-0.00034083	-2.5411	-0.0015178	-3.1118	-0.0018587	597.2992190063586	72.429	0.45256	72.467	72.23	72.683	0.037148					39	18	3	0	0	0	0.77314	1	6887	6887		40.778	6.6056	1	121810			22973	6968	15524	15534	26377	26377					-0.0009177349932087964
KQHEGLATFY	10	Unmodified	_KQHEGLATFY_					0	0	0		nc|ENSG00000174840|Q6L8Q7-2|PDE12;ENSG00000174840|ENST00000311180|PDE12	nc|ENSG00000174840|Q6L8Q7-2|PDE12	nc|ENSG00000174840|Q6L8Q7-2|PDE12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.2972412109375	2	597.301113	1192.58767	-1.5686	-0.00093693	-1.7994	-0.0010748	-3.368	-0.0020117	597.2997204489745	72.152	0.45291	72.192	71.961	72.414	0.040215					35	19	2	0	0	0	0.6116	2	6935	6928;6935		49.442	10.635	1	136970			22974	6968	15524	15534	26378;26379	26379					-0.0009177349932087964
KQHFQLSH	8	Unmodified	_KQHFQLSH_					0	0	0		ENSG00000113205|ENST00000231130|PCDHB3	ENSG00000113205|ENST00000231130|PCDHB3	ENSG00000113205|ENST00000231130|PCDHB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.769287109375	2	512.769783	1023.52501	0.15873	8.1392E-05	-0.26285	-0.00013478	-0.10412	-5.3389E-05	512.76945041	30.19	0.77853	30.175	29.843	30.622	-0.015167					37	18	3	0	0	0	0.9295	1	1574	1574		55.504	2.1528	1	129150			22975	2702	15525	15535	26380	26380					0.014191252231285034
KQHRRLLKLRS	11	Unmodified	_KQHRRLLKLRS_					0	0	0			REV__nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	REV__nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9759826660156	3	478.975788	1433.90553	-1.5808	-0.00075714	-0.99267	-0.00047547	-2.5734	-0.0012326	478.9752399041666	51.639	1.4994	51.639	50.814	52.314	0					68	39	2	0	0	0	0.80813	1	4193	4193		9.6461	0.43434	1	107410	+		22976	18971	15526	15536	26381	26381					0.2059369854760007
KQHRRLLKLRS	11	Unmodified	_KQHRRLLKLRS_					0	0	0			REV__nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	REV__nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.97552490234375	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.065	1	59.099	58.599	59.599	0.033905								0	0	0	0.56276	1	5440	5440		21.78	8.8229	1		+		22977	18971	15526	15536	26382	26382					0.2059369854760007
KQHRRLLKLRS	11	Unmodified	_KQHRRLLKLRS_					0	0	0			REV__nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	REV__nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9744873046875	3	478.975788	1433.90553	0.27661	0.00013249	-3.3589	-0.0016089	-3.0823	-0.0014764	479.30840116268075	44.7	1.3272	44.749	44.002	45.329	0.048996					98	31	5	0	0	0	0.81021	1	3202	3202		9.2118	0.41249	1	651720	+		22978	18971	15526	15536	26383	26383					0.2059369854760007
KQIEGTGISMS	11	Oxidation (M)	_KQIEGTGISM(Oxidation (M))S_		KQIEGTGISM(1)S		KQIEGTGISM(75)S	0	0	1		ENSG00000155111|ENST00000368911|CDK19;nc|ENSG00000132964|P49336-2|CDK8;ENSG00000132964|ENST00000381527|CDK8	ENSG00000155111|ENST00000368911|CDK19	ENSG00000155111|ENST00000368911|CDK19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.7879028320312	2	583.789721	1165.56489	-1.3585	-0.00079305	-1.4591	-0.00085182	-2.8176	-0.0016449	583.7888412815615	68.005	0.64187	68.035	67.72	68.362	0.030571					70	25	4	0	0	0	0.28254	1	6481	6481		75.043	9.5779	1	528690			22979	5313	15527	15537	26384	26384		92			-0.011271606791297017
KQIFHSKESI	10	Unmodified	_KQIFHSKESI_					0	0	0		ENSG00000129534|ENST00000310806|MIS18BP1;nc|ENSG00000129534|Q6P0N0-2|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.8370971679688	2	608.837862	1215.66117	-0.43425	-0.00026439	-0.86567	-0.00052705	-1.2999	-0.00079144	608.8372155374379	110.58	1.0111	110.52	110.29	111.3	-0.055084					101	32	4	0	0	0	0.86587	1	12084	12084		29.17	4.9673	1	4475900			22980	3593	15528	15538	26385	26385					0.061967749431460106
KQILTLLPDL	10	Unmodified	_KQILTLLPDL_					0	0	0			REV__ENST00000451982.6_2_3:195408438-195423327:+|nuORF	REV__ENST00000451982.6_2_3:195408438-195423327:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.3665161132812	2	577.363182	1152.71181	3.0575	0.0017653	2.5466	0.0014703	5.6041	0.0032356	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.86718	1	11140	11140		27.882	3.3631	1	11111000	+		22981	26890	15529	15539	26386	26386					0.14156304268158237
KQILYLLEK	9	Unmodified	_KQILYLLEK_					0	0	0		nc|ENSG00000214826|Q92771|DDX12P;ENST00000543026.5_1_12:31242773-31246356:+|nuORF;ENST00000539049.5_1_12:31242373-31253526:+|nuORF;ENST00000435753.6_1_12:31242373-31254792:+|nuORF;ENST00000536265.5_1_12:31242773-31256767:+|nuORF;ENST00000539757.1_1_12:9440801-9462940:+|nuORF;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000013573|Q96FC9-3|DDX11;ENSG00000013573|ENST00000542838|DDX11;nc|ENSG00000256263|A8MPP1|DDX11L8;nc|ENSG00000013573|Q96FC9|DDX11	nc|ENSG00000214826|Q92771|DDX12P	nc|ENSG00000214826|Q92771|DDX12P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3566284179688	2	574.357899	1146.70125	-1.0357	-0.00059487	-2.3996	-0.0013783	-3.4354	-0.0019731	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.67345	1	10612	10612		42.396	5.237	1	715310			22982	15251	15530	15540	26387	26387					0.13376321613714026
KQIRHPRKH	9	Unmodified	_KQIRHPRKH_					0	0	0			REV__nc|ENSG00000122482|Q9H582-2|ZNF644	REV__nc|ENSG00000122482|Q9H582-2|ZNF644	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.91424560546875	3	400.579257	1198.71594	2.0292	0.00081285	0.7574	0.0003034	2.7866	0.0011162	400.57946225825975	20.455	0.9392	19.996	19.641	20.58	-0.4591					46	21	3	0	0	0	0.77244	1	675	675		32.812	1.1781	1	275000	+		22983	15459	15531	15541	26388	26388					0.1245325132506423
KQIRHPRKHI	10	Unmodified	_KQIRHPRKHI_					0	0	0			REV__nc|ENSG00000122482|Q9H582-2|ZNF644	REV__nc|ENSG00000122482|Q9H582-2|ZNF644	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2728271484375	3	438.273945	1311.80001	-1.4634	-0.00064136	-0.90938	-0.00039856	-2.3728	-0.0010399	438.2734550831373	106.96	1.4325	107.1	106.6	108.03	0.14105					150	35	5	0	0	0	0.86106	2	11474	11474;11510		33.922	11.36	1	5372900	+		22984	15459	15532	15542	26389;26390	26389					0.15657782421976663
KQIRHPRKHI	10	Unmodified	_KQIRHPRKHI_					0	0	0			REV__nc|ENSG00000122482|Q9H582-2|ZNF644	REV__nc|ENSG00000122482|Q9H582-2|ZNF644	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2731018066406	3	438.273945	1311.80001	0.73903	0.0003239	-3.0747	-0.0013476	-2.3357	-0.0010237	438.2725101796097	107.07	1.2292	107.16	106.69	107.92	0.091255					130	29	5	0	0	0	0.86802	1	11519	11519		27.047	5.2669	1	4759800	+		22985	15459	15532	15542	26391	26391					0.15657782421976663
KQITAKRAL	9	Unmodified	_KQITAKRAL_					0	0	0			REV__ENSG00000166685|ENST00000299886|COG1	REV__ENSG00000166685|ENST00000299886|COG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.8324584960938	2	514.832383	1027.65021	1.0308	0.00053067	-0.97324	-0.00050106	0.057527	2.9617E-05	514.8316185932387	20.597	0.45096	20.138	19.915	20.366	-0.4591					20	9	3	0	0	0	0.38563	1	682	682		58.782	3.2778	1	92510	+		22986	21310	15533	15543	26392	26392					0.13749417359508698
KQITAKRAL	9	Unmodified	_KQITAKRAL_					0	0	0			REV__ENSG00000166685|ENST00000299886|COG1	REV__ENSG00000166685|ENST00000299886|COG1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	514.832383	1027.65021	0.81915	0.00042172	-0.93887	-0.00048336	-0.11972	-6.1637E-05	515.335572785191	19.766	0.13225	19.743	19.654	19.786	-0.023342	-0.2693	-0.00011553	NaN	58.782	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35957	+		22987	21310	15533	15543							0.13749417359508698
KQITAKRAL	9	Unmodified	_KQITAKRAL_					0	0	0			REV__ENSG00000166685|ENST00000299886|COG1	REV__ENSG00000166685|ENST00000299886|COG1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	514.832383	1027.65021	1.0308	0.00053067	-0.97324	-0.00050106	0.057527	2.9617E-05	514.8316185932387	20.597	0.45096	20.138	19.915	20.366	-0.4591	0.12589	-0.00015092	NaN	58.782	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92510	+		22988	21310	15533	15543							0.13749417359508698
KQITLRATT	9	Unmodified	_KQITLRATT_					0	0	0			REV__ENSG00000164199|ENST00000405460|ADGRV1	REV__ENSG00000164199|ENST00000405460|ADGRV1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3132934570312	2	516.314023	1030.61349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.35	1	116.41	115.91	116.91	0.059448								0	0	0	0.34932	1	12357	12357		14.865	1.0895	1		+		22989	21051	15534	15544	26393	26393					0.09941120742928433
KQIVRKGYR	9	Unmodified	_KQIVRKGYR_					0	0	0			REV__nc|ENSG00000013561|Q9UBS8-2|RNF14	REV__nc|ENSG00000013561|Q9UBS8-2|RNF14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3561401367188	2	574.356557	1146.69856	2.697	0.001549	-3.8251	-0.002197	-1.1282	-0.00064797	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.78983	1	10810	10810		27.882	0	1	738540	+		22990	16198	15535	15545	26394	26394					0.13107910999406158
KQIVSSAKMLL	11	Unmodified	_KQIVSSAKMLL_					0	0	0		ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5833435058594	3	406.581053	1216.72133	3.1308	0.0012729	4.2821	0.001741	7.4129	0.0030139	406.5827071519945	112.24	0.82966	112.27	112.06	112.89	0.030602					58	32	2	0	0	0	0.75457	1	13585	13585		21.032	1.0018	1	1459000			22991	5781	15536	15546	26395	26395					0.12163749282012759
KQKEEQRKKQK	11	Unmodified	_KQKEEQRKKQK_					0	0	0		nc|ENSG00000164221|Q8NEF3|CCDC112;ENSG00000164221|ENST00000379611|CCDC112	nc|ENSG00000164221|Q8NEF3|CCDC112	nc|ENSG00000164221|Q8NEF3|CCDC112	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.298828125	3	486.62308	1456.84741	0.3905	0.00019003	-0.12661	-6.1612E-05	0.26389	0.00012842	486.62249290157524	29.481	0.29855	29.392	29.276	29.575	-0.089546					11	6	2	0	0	0	0.17955	1	1880	1880		17.833	5.4003	1	45749			22992	5941	15537	15547	26396	26396					0.1372597211163793
KQKIRKPRPQ	10	Unmodified	_KQKIRKPRPQ_					0	0	0		nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3;nc|ENSG00000147548|Q9BZ95-3|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	427.30279541015625	3	426.942084	1277.80442	-0.18248	-7.7909E-05	1.8418	0.00078635	1.6593	0.00070844	427.2766002614565	67.688	0.074097	67.709	67.647	67.721	0.021599					4	2	2	0	0	0	0.37624	1	6358	6358		11.097	4.7759	1	29569			22993	4909	15538	15548	26397	26397					0.17663246844881542
KQKIRKPRPQR	11	Unmodified	_KQKIRKPRPQR_					0	0	0		nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3;nc|ENSG00000147548|Q9BZ95-3|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9745788574219	3	478.975788	1433.90553	-0.022494	-1.0774E-05	-2.4548	-0.0011758	-2.4773	-0.0011866	478.9744999510038	52.877	2.746	52.874	51.525	54.271	-0.0033035					162	72	3	0	0	0	0.79476	1	4479	4479		12.433	0	1	150480			22994	4909	15539	15549	26398	26398					0.20593698547577333
KQKIRKPRPQR	11	Unmodified	_KQKIRKPRPQR_					0	0	0		nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3;nc|ENSG00000147548|Q9BZ95-3|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.30865478515625	3	478.975788	1433.90553	0.29105	0.00013941	-3.0181	-0.0014456	-2.7271	-0.0013062	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.79224	1	3464	3464		12.957	3.7457	1	395190			22995	4909	15539	15549	26399	26399					0.20593698547577333
KQKKKERCWED	11	Unmodified	_KQKKKERCWED_					0	0	0		ENST00000481507.5_1_9:37326993-37357262:+|nuORF;ENSG00000147905|ENST00000336755|ZCCHC7	ENST00000481507.5_1_9:37326993-37357262:+|nuORF	ENST00000481507.5_1_9:37326993-37357262:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.6183776855469	3	493.25752	1476.75073	-0.7263	-0.00035825	1.7481	0.00086226	1.0218	0.000504	493.5938007122653	30.585	0.072906	30.648	30.607	30.68	0.063124					5	3	2	0	0	0	0.17835	1	1353	1353		16.53	0	1	34606			22996	4929	15540	15550	26400	26400					0.03142661560218585
KQKKKRINLV	10	Unmodified	_KQKKKRINLV_					0	0	0		ENST00000414330.2_1_1:227786537-227786660:-|nuORF	ENST00000414330.2_1_1:227786537-227786660:-|nuORF	ENST00000414330.2_1_1:227786537-227786660:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.3158264160156	3	418.950468	1253.82957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.463	1	14.871	14.371	15.371	-0.59211								0	0	0	0.45132	1	24	24		11.097	2.4031	1				22997	11365	15541	15551	26401	26401					0.21281301647468354
KQKKVEVETK	10	Unmodified	_KQKKVEVETK_					0	0	0			REV__ENSG00000216937|ENST00000639629|CCDC7	REV__ENSG00000216937|ENST00000639629|CCDC7	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2489929199219	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.14	1	114.17	113.67	114.67	0.026466								0	0	0	0.45132	1	12490	12490		21.686	3.8526	1		+		22998	23696	15542	15552	26402	26402					0.1194561714869451
KQKLAETSSLS	11	Unmodified	_KQKLAETSSLS_					0	0	0		ENSG00000110318|ENST00000263468|CEP126	ENSG00000110318|ENST00000263468|CEP126	ENSG00000110318|ENST00000263468|CEP126	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.3321533203125	2	596.33261	1190.65067	0.92114	0.00054931	-0.45114	-0.00026903	0.47	0.00028028	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.7342	1	9935	9935		25.574	0	1	1402200			22999	2520	15543	15553	26403	26403					0.06296747498049626
KQKLDSINAS	10	Unmodified	_KQKLDSINAS_					0	0	0			REV__ENST00000527601.5_1_11:31392283-31406146:+|nuORF	REV__ENST00000527601.5_1_11:31392283-31406146:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3052368164062	2	552.306395	1102.59824	-0.70613	-0.00039	0.73262	0.00040463	0.026487	1.4629E-05	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.86106	1	9757	9757		33.922	2.3918	1	1609500	+		23000	21702	15544	15554	26404	26404					0.05104209155092576
KQKLLPIPQTC	11	Unmodified	_KQKLLPIPQTC_					0	0	0			REV__nc|ENSG00000227345|Q86W56-5|PARG	REV__nc|ENSG00000227345|Q86W56-5|PARG	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8761596679688	2	634.873391	1267.73223	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.79	1	114.85	114.35	115.35	0.061073								0	0	0	0.56276	1	12263	12263		24.519	1.9395	1		+		23001	23746	15545	15555	26405	26405					0.10907151656306269
KQKPRILRQP	10	Unmodified	_KQKPRILRQP_					0	0	0			REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2283935546875	3	421.938451	1262.79352	-1.8033	-0.00076087	2.8842	0.0012169	1.0809	0.00045608	421.9393396865395	63.832	0.29527	63.952	63.819	64.114	0.12004					17	13	2	0	0	0	0.37624	1	5582	5582		16.717	0	1	72859	+		23002	22893	15546	15556	26406	26406					0.17263844470608092
KQKRQFVHLAV	11	Unmodified	_KQKRQFVHLAV_					0	0	0		nc|ENSG00000162065|Q9ULP9-2|TBC1D24	nc|ENSG00000162065|Q9ULP9-2|TBC1D24	nc|ENSG00000162065|Q9ULP9-2|TBC1D24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9439697265625	3	451.941973	1352.80409	-0.094243	-4.2593E-05	3.1853	0.0014396	3.091	0.001397	451.9433078192179	55.499	2.0176	55.489	54.191	56.208	-0.010136					136	62	4	0	0	0	0.71207	1	4953	4953		29.551	4.4248	1	381010			23003	15043	15547	15557	26407	26407					0.14179827125030897
KQKTASDKF	9	Unmodified	_KQKTASDKF_					0	0	0			REV__nc|ENSG00000115761|Q9BSC4-2|NOL10	REV__nc|ENSG00000115761|Q9BSC4-2|NOL10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3611450195312	2	526.790381	1051.56621	0.21851	0.00011511	-1.6665	-0.00087791	-1.448	-0.0007628	526.7869100493258	33.078	0.13337	33.188	33.145	33.278	0.10991					6	4	2	0	0	0	0.20789	1	1588	1588		31.53	1.0262	1	30380	+		23004	18150	15548	15558	26408	26408					0.04248841471940068
KQLAPIWDKLG	11	Unmodified	_KQLAPIWDKLG_					0	0	0		ENSG00000185624|ENST00000331483|P4HB	ENSG00000185624|ENST00000331483|P4HB	ENSG00000185624|ENST00000331483|P4HB	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8927001953125	2	634.871705	1267.72886	-0.0087455	-5.5523E-06	-2.1324	-0.0013538	-2.1411	-0.0013593	634.8699344364303	105.8	0.21316	105.8	105.64	105.85	0					6	4	2	0	0	0	0.15819	1	10933	10933		69.628	18.435	1	105150			23005	7730	15549	15559	26409	26409					0.10570224873913503
KQLARARHL	9	Unmodified	_KQLARARHL_					0	0	0			REV__ENST00000515144.5_1_5:14293150-14488426:+|nuORF	REV__ENST00000515144.5_1_5:14293150-14488426:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8406982421875	2	546.841074	1091.66759	0.84844	0.00046396	-3.1925	-0.0017458	-2.3441	-0.0012818	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.77546	1	10498	10498		31.955	2.8053	1	43597000	+		23006	16304	15550	15560	26410	26410					0.12542757685173456
KQLARFAGAS	10	Unmodified	_KQLARFAGAS_					0	0	0		nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;ENSG00000073792|ENST00000382199|IGF2BP2	nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2	nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8269653320312	2	524.79854	1047.58253	-0.64125	-0.00033653	-2.7903	-0.0014644	-3.4316	-0.0018009	524.7974292573064	99.45	0.3315	99.45	99.222	99.553	0					10	7	2	0	0	0	0.37624	1	10043	10043		56.721	6.6965	1	50781			23007	1299	15551	15561	26411	26411					0.06063967428713113
KQLARRVVSPA	11	Unmodified	_KQLARRVVSPA_					0	0	0			REV__ENST00000568628.5_1_19:11505346-11508138:-|nuORF	REV__ENST00000568628.5_1_19:11505346-11508138:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.92236328125	3	408.922689	1223.74624	-0.18603	-7.607E-05	-0.74679	-0.00030538	-0.93282	-0.00038145	408.9223182552884	104.73	3.6152	104.72	103.66	107.27	-0.014809					241	85	5	0	0	0	0.76699	1	11369	11369		11.932	0	1	2991100	+		23008	23563	15552	15562	26412	26412					0.1433156519960903
KQLASIQSKLS	11	Unmodified	_KQLASIQSKLS_					0	0	0			REV__nc|ENSG00000142621|B1AJZ9-4|FHAD1	REV__nc|ENSG00000142621|B1AJZ9-4|FHAD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	601.8590698242188	2	601.858795	1201.70304	-1.2832	-0.00077232	-0.42174	-0.00025383	-1.705	-0.0010262	601.8583669122717	103.38	2.0705	103.5	103.11	105.18	0.11494					139	51	4	0	0	0	0.70737	1	10891	10891		30.318	2.4355	1	2503700	+		23009	19749	15553	15563	26413	26413					0.11025330631650831
KQLAVRLRQL	10	Unmodified	_KQLAVRLRQL_					0	0	0			REV__nc|ENSG00000155093|Q92932-4|PTPRN2	REV__nc|ENSG00000155093|Q92932-4|PTPRN2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.8793334960938	2	612.898589	1223.78262	-0.38691	-0.00023714	3.709	0.0022732	3.3221	0.0020361	612.9004044163975	104.82	0.36656	104.8	104.46	104.82	-0.014809					13	8	3	0	0	0	0.37624	1	11301	11301		27.882	1.1893	1	261770	+		23010	20415	15554	15564	26414	26414					0.17968442096298531
KQLAVRLRQL	10	Unmodified	_KQLAVRLRQL_					0	0	0			REV__nc|ENSG00000155093|Q92932-4|PTPRN2	REV__nc|ENSG00000155093|Q92932-4|PTPRN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	613.383544921875	2	612.898589	1223.78262	1.1727	0.00071877	-0.89104	-0.00054612	0.2817	0.00017265	613.4004905426181	104.07	0.20999	104.24	104.05	104.26	0.17096					7	4	2	0	0	0	0.37624	1	11028	11028		29.15	15.012	1	243240	+		23011	20415	15554	15564	26415	26415					0.17968442096298531
KQLAVRLRQL	10	Unmodified	_KQLAVRLRQL_					0	0	0			REV__nc|ENSG00000155093|Q92932-4|PTPRN2	REV__nc|ENSG00000155093|Q92932-4|PTPRN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8801879882812	2	612.898589	1223.78262	0.91279	0.00055945	1.6077	0.00098538	2.5205	0.0015448	613.3994161374548	104.96	0.36932	105.07	104.98	105.35	0.10766					11	8	2	0	0	0	0.37624	1	11202	11202		16.473	0.83134	1	187570	+		23012	20415	15554	15564	26416	26416					0.17968442096298531
KQLENKKTG	9	Unmodified	_KQLENKKTG_					0	0	0		ENSG00000179083|ENST00000683942|FAM133A;chrX:93698485-93709317|13|15.23|0.52|4.86|+|ENST00000332647|FAM133A,FAM133A	ENSG00000179083|ENST00000683942|FAM133A	ENSG00000179083|ENST00000683942|FAM133A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3035278320312	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.76255	1	9606	9606		35.618	5.1146	1	13080000			23013	556	15555	15565	26417	26417					0.07224530363282611
KQLFSSLAVL	10	Unmodified	_KQLFSSLAVL_					0	0	0		ENSG00000198795|ENST00000361524|ZNF521	ENSG00000198795|ENST00000361524|ZNF521	ENSG00000198795|ENST00000361524|ZNF521	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.33203125	2	553.334424	1104.6543	-1.4413	-0.00079751	-2.1828	-0.0012078	-3.6241	-0.0020053	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.74274	1	9957	9957		42.396	8.2236	1	2490200			23014	8336	15556	15566	26418	26418					0.10615462062582992
KQLGRLHQI	9	Unmodified	_KQLGRLHQI_					0	0	0			REV__ENSG00000175336|ENST00000398189|APOF	REV__ENSG00000175336|ENST00000398189|APOF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8408203125	2	546.835457	1091.65636	3.386	0.0018516	4.2852	0.0023433	7.6712	0.0041949	546.8379771318001	101.02	3.777	100.97	100.36	104.13	-0.052116					284	90	6	0	0	0	0.72402	4	10931	10931;11086;11238;11263		38.806	8.9124	1	39176000	+		23015	22063	15557	15567	26419;26420;26421;26422	26419					0.11419935591038666
KQLGRTLSA	9	Unmodified	_KQLGRTLSA_					0	0	0			REV__nc|ENSG00000174038|Q5VYM1-3|SPATA31G1	REV__nc|ENSG00000174038|Q5VYM1-3|SPATA31G1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.2931213378906	2	487.293091	972.571629	0.70329	0.00034271	-0.54514	-0.00026564	0.15815	7.7066E-05	487.2927254358079	90.914	2.8458	91.068	90.679	93.525	0.15388					125	68	3	0	0	0	0.76764	1	9164	9164		34.173	7.3764	1	1558400	+		23016	21971	15558	15568	26423	26423					0.08424565054428967
KQLHKLVSI	9	Unmodified	_KQLHKLVSI_					0	0	0			REV__ENST00000480065.1_1_1:222742724-222743894:-|nuORF	REV__ENST00000480065.1_1_1:222742724-222743894:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.3396606445312	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.78058	1	10152	10152		30.504	2.6214	1	1199500	+		23017	27410	15559	15569	26424	26424					0.1408658801931324
KQLHKLVSI	9	Unmodified	_KQLHKLVSI_					0	0	0			REV__ENST00000480065.1_1_1:222742724-222743894:-|nuORF	REV__ENST00000480065.1_1_1:222742724-222743894:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3399047851562	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.74721	2	10563	10563;10575		37.159	2.9866	1	2530900	+		23018	27410	15559	15569	26425;26426	26425					0.1408658801931324
KQLILAGTGGY	11	Unmodified	_KQLILAGTGGY_					0	0	0			REV__ENSG00000149418|ENST00000278742|ST14	REV__ENSG00000149418|ENST00000278742|ST14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.8201293945312	2	560.821681	1119.62881	0.38825	0.00021774	-3.7813	-0.0021206	-3.393	-0.0019029	560.8194818178797	92.394	2.729	92.618	91.343	94.072	0.22352					209	64	4	0	0	0	0.7144	1	9368	9368		29.17	1.2878	1	816880	+		23019	20166	15560	15570	26427	26427					0.07377987540144204
KQLKKKSEEV	10	Unmodified	_KQLKKKSEEV_					0	0	0		nc|ENSG00000122483|Q5T9S5-2|CCDC18;nc|ENSG00000122483|Q5T9S5|CCDC18;ENSG00000122483|ENST00000690025|CCDC18;ENST00000421014.2_1_1:93687225-93704878:+|nuORF	nc|ENSG00000122483|Q5T9S5-2|CCDC18	nc|ENSG00000122483|Q5T9S5-2|CCDC18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.248291015625	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.06	1	111.11	110.61	111.61	0.049095								0	0	0	0.45132	1	13479	13479		20.03	0.7678	1				23020	3227	15561	15571	26428	26428					0.1194561714869451
KQLLAKQVKW	10	Unmodified	_KQLLAKQVKW_					0	0	0			REV__nc|ENSG00000060749|Q2KHR3-2|QSER1	REV__nc|ENSG00000060749|Q2KHR3-2|QSER1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3927612304688	2	621.390065	1240.76558	-0.078753	-4.8936E-05	4.3785	0.0027208	4.2997	0.0026718	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.86589	1	10774	10774		29.15	1.2673	1	10411000	+		23021	16452	15562	15572	26429	26429					0.15482521490503132
KQLLAKQVKW	10	Unmodified	_KQLLAKQVKW_					0	0	0			REV__nc|ENSG00000060749|Q2KHR3-2|QSER1	REV__nc|ENSG00000060749|Q2KHR3-2|QSER1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.392822265625	2	621.390065	1240.76558	0.69841	0.00043398	3.6119	0.0022444	4.3103	0.0026784	621.3922056168815	104.57	2.6797	104.61	104.09	106.77	0.039856					250	63	5	0	0	0	0.74274	1	11472	11472		42.396	8.2236	1	13976000	+		23022	16452	15562	15572	26430	26430					0.15482521490503132
KQLLGFHPVSL	11	Unmodified	_KQLLGFHPVSL_					0	0	0			REV__ENST00000527128.5_1_9:100049978-100052895:+|nuORF	REV__ENST00000527128.5_1_9:100049978-100052895:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8690795898438	2	619.866423	1237.71829	2.0624	0.0012784	2.5108	0.0015564	4.5732	0.0028348	619.8678492982955	94.196	2.767	94.137	92.294	95.061	-0.059212					208	65	4	0	0	0	0.65746	1	10103	10103		37.812	5.061	1	2061200	+		23023	28222	15563	15573	26431	26431					0.1089424221952413
KQLLISSS	8	Unmodified	_KQLLISSS_					0	0	0		ENSG00000141431|ENST00000269197|ASXL3	ENSG00000141431|ENST00000269197|ASXL3	ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2616882324219	2	438.263468	874.512382	-1.5749	-0.00069021	4.2465	0.0018611	2.6717	0.0011709	438.26424066079335	39.694	0.79234	39.701	39.118	39.91	0.0065002					37	20	3	0	0	0	0.7961	1	2452	2452		17.365	0.89182	1	140070			23024	4498	15564	15574	26432	26432					0.07010669040232642
KQLLLERFLNR	11	Unmodified	_KQLLLERFLNR_					0	0	0		ENSG00000111412|ENST00000261318|SPRING1	ENSG00000111412|ENST00000261318|SPRING1	ENSG00000111412|ENST00000261318|SPRING1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6239318847656	3	477.292782	1428.85652	2.8121	0.0013422	-3.4787	-0.0016604	-0.66657	-0.00031815	477.2910781058782	116.03	0.79783	116	115.71	116.51	-0.024338					33	25	2	0	0	0	0.17996	1	12837	12837		12.433	7.2905	1	108240			23025	2580	15565	15575	26433	26433					0.1592436546798126
KQLLLSRKA	9	Unmodified	_KQLLLSRKA_					0	0	0		ENSG00000078070|ENST00000265594|MCCC1;ENST00000495767.5_1_3:182740340-182790239:-|nuORF	ENSG00000078070|ENST00000265594|MCCC1	ENSG00000078070|ENST00000265594|MCCC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.8475952148438	2	528.848033	1055.68151	1.2561	0.00066428	-1.3944	-0.00073744	-0.13835	-7.3165E-05	528.8472126595447	20.225	0.64354	19.765	19.502	20.145	-0.4591					27	13	3	0	0	0	0.55097	1	627	627		49.442	1.482	1	199250			23026	1390	15566	15576	26434	26434					0.1558999039361879
KQLLRDFV	8	Unmodified	_KQLLRDFV_					0	0	0		L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|61|2|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|61|2|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|61|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8043518066406	2	509.805834	1017.59712	0.41341	0.00021076	-3.7513	-0.0019124	-3.3379	-0.0017017	509.80378130113013	99.26	1.5845	99.308	98.978	100.56	0.047523					71	36	3	0	0	0	0.884	1	10622	10622		33.516	3.0119	1	477970			23027	14673	15567	15577	26435	26435					0.08902039576844345
KQLQPLESKPS	11	Unmodified	_KQLQPLESKPS_					0	0	0		nc|ENSG00000111837|P20794-3|MAK;nc|ENSG00000111837|P20794|MAK;ENSG00000111837|ENST00000354489|MAK	nc|ENSG00000111837|P20794-3|MAK	nc|ENSG00000111837|P20794-3|MAK	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.8550415039062	2	627.856252	1253.69795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.753	1	15.264	14.764	15.764	-0.48917								0	0	0	0.26962	1	43	43		75.043	3.1658	1				23028	2615	15568	15578	26436	26436					0.08125026769039323
KQLRANKE	8	Unmodified	_KQLRANKE_					0	0	0			REV__nc|ENSG00000128487|Q5M775-5|SPECC1	REV__nc|ENSG00000128487|Q5M775-5|SPECC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.79541015625	2	493.790715	985.566878	0.24593	0.00012144	0.69528	0.00034332	0.94121	0.00046476	493.79104975670623	22.685	0.43901	22.266	22.105	22.544	-0.41879					15	9	2	0	0	0	0.4196	1	952	952		38.806	1.647	1	117500	+		23029	18772	15569	15579	26437	26437					0.07351680911654057
KQLSLTKGH	9	Unmodified	_KQLSLTKGH_					0	0	0			REV__AluJb_dup44426|chr6:110970824-110971113:-|1.071314604451179|0.2304293952267828|2.22|63.0|7|3|sense	REV__AluJb_dup44426|chr6:110970824-110971113:-|1.071314604451179|0.2304293952267828|2.22|63.0|7|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3010559082031	2	506.300916	1010.58728	0.76933	0.00038951	-0.62293	-0.00031539	0.1464	7.4122E-05	506.30057654183594	96.316	1.2031	96.479	95.934	97.138	0.16317					64	27	3	0	0	0	0.77696	1	9929	9929		31.53	0	1	470040	+		23030	15379	15570	15580	26438	26438					0.08240851571463281
KQLTRLGGQ	9	Unmodified	_KQLTRLGGQ_					0	0	0			REV__nc|ENSG00000187764|Q92854-2|SEMA4D;REV__ENSG00000187764|ENST00000422704|SEMA4D	REV__ENSG00000187764|ENST00000422704|SEMA4D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7982482910156	2	500.79854	999.582528	2.7418	0.0013731	-3.4713	-0.0017384	-0.72955	-0.00036536	500.79706432207496	25.439	1.0282	25.008	24.454	25.482	-0.4311					55	23	5	0	0	0	0.39367	1	1330	1330		58.23	4.8785	1	516210	+		23031	30113;22944	15571	15581	26439	26439					0.08271967428709104
KQLWVEVN	8	Unmodified	_KQLWVEVN_					0	0	0			REV__ENST00000520568.1_1_8:89198619-89339435:-|nuORF	REV__ENST00000520568.1_1_8:89198619-89339435:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.27978515625	2	508.282192	1014.54983	0.22565	0.0001147	-4.0704	-0.0020689	-3.8448	-0.0019542	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.87922	1	8994	8994		31.955	0.42505	1	1820400	+		23032	20469	15572	15582	26440	26440					0.04313760305853975
KQLYMNYQ	8	Unmodified	_KQLYMNYQ_					0	0	0		ENSG00000173166|ENST00000319170|RAPH1;nc|ENSG00000173166|Q70E73-5|RAPH1;nc|ENSG00000173166|Q70E73-2|RAPH1;nc|ENSG00000173166|Q70E73-8|RAPH1;nc|ENSG00000173166|Q70E73-4|RAPH1;nc|ENSG00000173166|Q70E73-7|RAPH1;nc|ENSG00000173166|Q70E73-3|RAPH1;nc|ENSG00000173166|Q70E73-9|RAPH1;nc|ENSG00000173166|Q70E73-6|RAPH1	ENSG00000173166|ENST00000319170|RAPH1;nc|ENSG00000173166|Q70E73-7|RAPH1	nc|ENSG00000173166|Q70E73-7|RAPH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.2681274414062	2	544.265684	1086.51682	0.85528	0.0004655	1.7247	0.0009387	2.58	0.0014042	544.2668098771513	27.215	0.34131	27.188	26.967	27.309	-0.027704					13	9	2	0	0	0	0.88915	1	1226	1226		35.201	1.0282	1	26163			23033	6835;15100	15573	15583	26441	26441					-0.022981898084935892
KQMLLDLKAT	10	Unmodified	_KQMLLDLKAT_					0	0	0			REV__ENSG00000089737|ENST00000621632|DDX24	REV__ENSG00000089737|ENST00000621632|DDX24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.8406372070312	2	580.839017	1159.66348	-0.90693	-0.00052678	3.5006	0.0020333	2.5936	0.0015065	580.8407767096548	69.755	0.8518	69.79	69.548	70.399	0.035622					124	41	4	0	0	0	0.86587	1	6679	6679		29.17	1.2878	1	14836000	+		23034	16975	15574	15584	26442	26442					0.09003487356585538
KQNHRLKK	8	Unmodified	_KQNHRLKK_					0	0	0			REV__ENST00000533296.5_1_6:130536401-130536509:-|nuORF	REV__ENST00000533296.5_1_6:130536401-130536509:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8078002929688	2	526.327799	1050.64105	1.1158	0.00058728	-0.67369	-0.00035458	0.44212	0.0002327	526.3273363152832	18.093	0.37173	17.616	17.425	17.796	-0.47694					9	7	2	0	0	0	0.4196	1	365	365		25.45	6.0902	1	29890	+		23035	28341	15575	15585	26443	26443					0.11775068793849641
KQNKPHLWP	9	Unmodified	_KQNKPHLWP_					0	0	0			REV__ENST00000589042.5_3_2:179517806-179527536:-|nuORF	REV__ENST00000589042.5_3_2:179517806-179527536:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3192138671875	2	574.322183	1146.62981	-1.0331	-0.00059332	-3.7763	-0.0021688	-4.8093	-0.0027621	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.78058	1	9885	9885		30.504	0.18592	1	1380900	+		23036	29154	15576	15586	26444	26444					0.06236246699700132
KQNLFFKLIG	10	Unmodified	_KQNLFFKLIG_					0	0	0			REV__ENSG00000178033|ENST00000368599|CALHM5	REV__ENSG00000178033|ENST00000368599|CALHM5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3668212890625	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.4	1	112.37	111.87	112.87	-0.025414								0	0	0	0.45132	1	12420	12420		11.511	1.2458	1		+		23037	22248	15577	15587	26445	26445					0.11739143707836774
KQNRQLLGLLL	11	Unmodified	_KQNRQLLGLLL_					0	0	0			REV__ENSG00000083290|ENST00000395544|ULK2	REV__ENSG00000083290|ENST00000395544|ULK2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3934936523438	2	648.411529	1294.8085	1.6037	0.0010399	2.1518	0.0013953	3.7555	0.0024351	648.413007343393	107.13	0.32605	107.27	107.2	107.53	0.13867					13	7	3	0	0	0	0.17273	1	11496	11496		9.1829	0	1	307710	+		23038	16850	15578	15588	26446	26446					0.1728929154794514
KQPERSLAS	9	Unmodified	_KQPERSLAS_					0	0	0		ENSG00000135956|ENST00000258439|TMEM127	ENSG00000135956|ENST00000258439|TMEM127	ENSG00000135956|ENST00000258439|TMEM127	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.28009033203125	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.76764	1	9257	9257		34.173	0	1	1903500			23039	4074	15579	15589	26447	26447					0.039116708121468946
KQPYHLRLL	9	Unmodified	_KQPYHLRLL_					0	0	0			REV__ENSG00000083444|ENST00000196061|PLOD1	REV__ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	584.3565673828125	2	584.353483	1166.69241	0.73697	0.00043065	3.6235	0.0021174	4.3605	0.0025481	584.3556286390271	92.429	3.0487	92.654	91.107	94.155	0.22547					201	72	4	0	0	0	0.78536	1	9314	9314		29.15	2.4566	1	730880	+		23040	16853	15580	15590	26448	26448					0.11573392767877522
KQQDRVPG	8	Unmodified	_KQQDRVPG_					0	0	0		nc|ENSG00000186185|Q86Y91-6|KIF18B;ENSG00000186185|ENST00000593135|KIF18B	nc|ENSG00000186185|Q86Y91-6|KIF18B	nc|ENSG00000186185|Q86Y91-6|KIF18B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.253662109375	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.87922	1	7834	7834		31.955	0.42505	1	946850			23041	7781	15581	15591	26449	26449					0.027191324691898444
KQQVGLPKDKL	11	Unmodified	_KQQVGLPKDKL_					0	0	0			REV__ENSG00000101751|ENST00000579534|POLI	REV__ENSG00000101751|ENST00000579534|POLI	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3832397460938	2	627.382437	1252.75032	-0.22024	-0.00013818	0.10177	6.385E-05	-0.11847	-7.4327E-05	627.3822869998414	118.99	0.08947	118.91	118.85	118.94	-0.07531					6	3	2	0	0	0	0.65746	1	12765	12765		37.812	15.232	1	303240	+		23042	17300	15582	15592	26450	26450					0.13405609902679316
KQRAAKTP	8	Unmodified	_KQRAAKTP_					0	0	0			REV__ENSG00000183921|ENST00000602312|SDR42E2	REV__ENSG00000183921|ENST00000602312|SDR42E2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2751770019531	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.84341	1	11337	11337		24.203	1.1603	1	19085000	+		23043	22636	15583	15593	26451	26451					0.08152313228504227
KQRAGQTK	8	Unmodified	_KQRAGQTK_					0	0	0			REV__ENSG00000185010|ENST00000360256|F8	REV__ENSG00000185010|ENST00000360256|F8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.78204345703125	2	458.769783	915.525013	0.63581	0.00029169	-2.2612	-0.0010374	-1.6254	-0.00074567	458.7691021478149	20.958	0.19326	20.942	20.786	20.979	-0.016428					11	8	2	0	0	0	0.4002	1	535	535		101.6	0	1	58887	+		23044	22726	15584	15594	26452	26452					0.06387125223147905
KQRASRLVQR	10	Unmodified	_KQRASRLVQR_					0	0	0		nc|ENSG00000159086|Q9Y5B6-4|PAXBP1;nc|ENSG00000159086|Q9Y5B6-2|PAXBP1;ENSG00000159086|ENST00000331923|PAXBP1	nc|ENSG00000159086|Q9Y5B6-4|PAXBP1	nc|ENSG00000159086|Q9Y5B6-4|PAXBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.59136962890625	3	414.589822	1240.74764	1.2811	0.00053112	2.0107	0.0008336	3.2917	0.0013647	414.5906694648557	18.113	2.0122	17.636	17.425	19.437	-0.47694					106	43	5	0	0	0	0.23224	1	359	359		80.455	8.5771	1	3319700			23045	5509	15585	15595	26453	26453					0.13689199288342024
KQRASRLVQR	10	Unmodified	_KQRASRLVQR_					0	0	0		nc|ENSG00000159086|Q9Y5B6-4|PAXBP1;nc|ENSG00000159086|Q9Y5B6-2|PAXBP1;ENSG00000159086|ENST00000331923|PAXBP1	nc|ENSG00000159086|Q9Y5B6-4|PAXBP1	nc|ENSG00000159086|Q9Y5B6-4|PAXBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.59130859375	3	414.589822	1240.74764	0.21654	8.9776E-05	2.988	0.0012388	3.2045	0.0013286	414.5911015658191	18.275	1.4533	17.654	17.447	18.9	-0.62141					70	32	3	0	0	0	0.24988	1	371	371		78.264	10.77	1	4091800			23046	5509	15585	15595	26454	26454					0.13689199288342024
KQRDSEIMQQK	11	Unmodified	_KQRDSEIMQQK_					0	0	0		nc|ENSG00000140264|P84101-4|SERF2;ENSG00000140264|ENST00000249786|SERF2	nc|ENSG00000140264|P84101-4|SERF2	nc|ENSG00000140264|P84101-4|SERF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.24200439453125	3	464.241759	1389.70345	0.29313	0.00013608	-0.20867	-9.6874E-05	0.084458	3.9209E-05	464.241588360812	20.059	0.60054	19.589	19.35	19.95	-0.46967					36	12	4	0	0	0	0.61907	1	591	591		42.243	2.3694	1	453210			23047	4418	15586	15596	26455	26455					0.024183822891927775
KQRDSEIMQQK	11	Unmodified	_KQRDSEIMQQK_					0	0	0		nc|ENSG00000140264|P84101-4|SERF2;ENSG00000140264|ENST00000249786|SERF2	nc|ENSG00000140264|P84101-4|SERF2	nc|ENSG00000140264|P84101-4|SERF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.241943359375	3	464.241759	1389.70345	-0.1578	-7.3257E-05	0.19541	9.0717E-05	0.037609	1.746E-05	464.2417671909734	20.24	0.72495	19.61	19.351	20.076	-0.62961					40	15	4	0	0	0	0.040292	3	622	612;622;635		104.07	43.903	1	538570			23048	4418	15586	15596	26456;26457;26458	26457					0.024183822891927775
KQREKLRRK	9	Unmodified	_KQREKLRRK_					0	0	0		nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A;nc|ENSG00000158528|Q9ULJ8|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A;ENSG00000158528|ENST00000433360|PPP1R9A	nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A	nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.5911865234375	3	414.60195	1240.78402	0.218	9.0382E-05	-1.4716	-0.00061011	-1.2536	-0.00051973	414.6018021377048	18.275	0.18243	17.654	17.539	17.722	-0.62141					5	3	2	0	0	0	0.20789	1	359	359		67.494	2.0283	1	54780			23049	5485	15587	15597	26459	26459					0.17326076185054262
KQRFKKVLKKY	11	Unmodified	_KQRFKKVLKKY_					0	0	0			REV__ENSG00000110448|ENST00000347785|CD5	REV__ENSG00000110448|ENST00000347785|CD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.3190612792969	3	489.317039	1464.92929	0.070995	3.4739E-05	2.5243	0.0012352	2.5953	0.0012699	489.3182650642184	16.441	0.40953	16.501	16.359	16.769	0.059267					51	17	4	0	0	0	0.74771	2	141	141;149		22.562	5.3948	1	1373000	+		23050	17817	15588	15598	26460;26461	26460					0.2154211926140306
KQRFKKVLKKY	11	Unmodified	_KQRFKKVLKKY_					0	0	0			REV__ENSG00000110448|ENST00000347785|CD5	REV__ENSG00000110448|ENST00000347785|CD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.3135986328125	3	489.317039	1464.92929	0.73595	0.00036011	2.1621	0.001058	2.8981	0.0014181	489.31804130138323	16.521	0.70839	16.497	16.337	17.046	-0.024035					78	30	5	0	0	0	0.81219	2	156	153;156		8.7993	3.1005	1	1127500	+		23051	17817	15588	15598	26462;26463	26463					0.2154211926140306
KQRHNKLWR	9	Unmodified	_KQRHNKLWR_					0	0	0		nc|ENSG00000084112|Q8WYL5-2|SSH1;nc|ENSG00000084112|Q8WYL5-5|SSH1;ENSG00000084112|ENST00000326495|SSH1;nc|ENSG00000084112|Q8WYL5-4|SSH1;nc|ENSG00000141298|Q76I76|SSH2;ENSG00000141298|ENST00000540801|SSH2	nc|ENSG00000084112|Q8WYL5-2|SSH1;nc|ENSG00000141298|Q76I76|SSH2	nc|ENSG00000084112|Q8WYL5-2|SSH1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5818786621094	3	422.582779	1264.72651	-1.0345	-0.00043717	-0.82824	-0.00035	-1.8628	-0.00078717	422.582401446262	98.086	2.0202	98.086	97.162	99.182	0					111	48	3	0	0	0	0.7932	1	9902	9902		12.812	1.1758	1	144500			23052	1514;4489	15589	15599	26464	26464					0.10473233979496399
KQRHVRKKRKI	11	Unmodified	_KQRHVRKKRKI_					0	0	0		ENST00000533834.1_1_1:104080032-104087738:+|nuORF;nc|ENSG00000185946|Q96LT9-2|RNPC3;ENSG00000185946|ENST00000423855|RNPC3	ENST00000533834.1_1_1:104080032-104087738:+|nuORF	ENST00000533834.1_1_1:104080032-104087738:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.79559326171875	3	492.995182	1475.96372	0.012309	6.0681E-06	-1.6348	-0.00080594	-1.6225	-0.00079987	493.3287957861499	22.181	2.7005	21.571	20.271	22.972	-0.6107					119	68	3	0	0	0	0.18372	1	990	990		3.4087	0.38274	1	228080			23053	7759	15590	15600	26465	26465					0.24477380192843157
KQRKKKNYK	9	Unmodified	_KQRKKKNYK_					0	0	0		nc|ENSG00000140848|Q96FN4-2|CPNE2;ENSG00000140848|ENST00000290776|CPNE2	nc|ENSG00000140848|Q96FN4-2|CPNE2	nc|ENSG00000140848|Q96FN4-2|CPNE2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.271240234375	3	407.591051	1219.75132	0.51521	0.00020999	-2.7583	-0.0011242	-2.243	-0.00091425	407.58994023394234	29.182	0.47535	29.009	28.717	29.192	-0.17336					15	10	2	0	0	0	0.20789	1	1846	1846		18.262	0	1	84534			23054	4459	15591	15601	26466	26466					0.1502386906220181
KQRLEAEAGR	10	Unmodified	_KQRLEAEAGR_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.3228149414062	2	579.322911	1156.63127	-0.49661	-0.0002877	0.46581	0.00026985	-0.030798	-1.7842E-05	579.3230834038757	16.47	0.3677	15.983	15.821	16.189	-0.48718					14	7	3	0	0	0	0.67571	1	144	144		45.972	1.8554	1	512640			23055	7193	15592	15602	26467	26467					0.05921835997787639
KQRLGLVKRGS	11	Unmodified	_KQRLGLVKRGS_					0	0	0		ENSG00000175262|ENST00000377004|C1orf127;nc|nan|Q8N9H9-2|C1orf127;nc|nan|Q8N9H9|C1orf127	ENSG00000175262|ENST00000377004|C1orf127	ENSG00000175262|ENST00000377004|C1orf127	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3928833007812	2	621.39367	1240.77279	-1.2196	-0.00075786	-0.45293	-0.00028145	-1.6726	-0.0010393	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.76322	1	11130	11130		19.104	1.6355	1	23459000			23056	7001	15593	15603	26468	26468					0.16203254090919472
KQRNKVKK	8	Unmodified	_KQRNKVKK_					0	0	0		nc|ENSG00000152583|Q14515-2|SPARCL1;ENSG00000152583|ENST00000282470|SPARCL1	nc|ENSG00000152583|Q14515-2|SPARCL1	nc|ENSG00000152583|Q14515-2|SPARCL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.81396484375	2	514.838	1027.66145	0.52764	0.00027165	1.1814	0.00060822	1.709	0.00087987	514.839148538389	16.591	0.2296	15.992	15.924	16.154	-0.59873					7	4	2	0	0	0	0.4196	1	147	147		76.847	15.875	1	25631			23057	5187	15594	15604	26469	26469					0.14872239453666225
KQRPLQPLRPI	11	Unmodified	_KQRPLQPLRPI_					0	0	0			REV__ENSG00000128602|ENST00000249373|SMO	REV__ENSG00000128602|ENST00000249373|SMO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2870788574219	3	449.285739	1344.83539	0.2136	9.5968E-05	2.2754	0.0010223	2.489	0.0011183	449.28680656225646	19.097	0.386	18.467	18.28	18.666	-0.6296					15	8	2	0	0	0	0.73621	1	480	480		25.126	1.7481	1	144920	+		23058	18783	15595	15605	26470	26470					0.1767640015912093
KQRPLQPLRPI	11	Unmodified	_KQRPLQPLRPI_					0	0	0			REV__ENSG00000128602|ENST00000249373|SMO	REV__ENSG00000128602|ENST00000249373|SMO	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	449.285739	1344.83539	-0.07483	-3.362E-05	2.823	0.0012683	2.7482	0.0012347	449.2867174957133	18.928	0.70944	18.451	17.983	18.693	-0.47694	-0.0079276	0.0005232	NaN	25.126	27	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59878	+		23059	18783	15595	15605							0.1767640015912093
KQRPLQPLRPI	11	Unmodified	_KQRPLQPLRPI_					0	0	0			REV__ENSG00000128602|ENST00000249373|SMO	REV__ENSG00000128602|ENST00000249373|SMO	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	449.285739	1344.83539	0.2136	9.5968E-05	2.2754	0.0010223	2.489	0.0011183	449.28680656225646	19.097	0.386	18.467	18.28	18.666	-0.6296	0.0079276	-0.00021495	NaN	25.126	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144920	+		23060	18783	15595	15605							0.1767640015912093
KQRPPRKR	8	Unmodified	_KQRPPRKR_					0	0	0			REV__ENSG00000119986|ENST00000370626|AVPI1	REV__ENSG00000119986|ENST00000370626|AVPI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.3357543945312	2	533.341241	1064.66793	-0.59229	-0.00031589	-1.1818	-0.00063028	-1.7741	-0.00094618	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.81548	1	10202	10202		20.482	0.48506	1	1199500	+		23061	18393	15596	15606	26471	26471					0.1381817740502811
KQRRKPTFLTR	11	Unmodified	_KQRRKPTFLTR_					0	0	0		ENSG00000186767|ENST00000374884|SPIN4	ENSG00000186767|ENST00000374884|SPIN4	ENSG00000186767|ENST00000374884|SPIN4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.7580871582031	3	477.628276	1429.863	-0.099654	-4.7598E-05	-2.0542	-0.00098113	-2.1538	-0.0010287	477.6272551090935	106.08	1.5994	106.06	105.36	106.96	-0.025146					56	37	2	0	0	0	0.17289	1	11485	11485		11.932	0	1	125300			23062	7817	15597	15607	26472	26472					0.16526303419345822
KQRRLERRREF	11	Unmodified	_KQRRLERRREF_					0	0	0			REV__ENST00000482470.5_1_7:134552484-134644871:+|nuORF	REV__ENST00000482470.5_1_7:134552484-134644871:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.9801635742188	3	525.309718	1572.90732	3.9552	0.0020777	-0.72201	-0.00037928	3.2332	0.0016985	525.3077170758435	104.92	1.8829	105.15	104.51	106.4	0.2268					138	50	5	0	0	0	0.8498	1	12804	12804		6.001	0.58812	1	329530	+		23063	18516	15598	15608	26473	26473					0.14378707565538207
KQSQKLLRQA	10	Unmodified	_KQSQKLLRQA_					0	0	0			REV__ENSG00000102580|ENST00000602402|DNAJC3	REV__ENSG00000102580|ENST00000602402|DNAJC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.58197021484375	3	400.578811	1198.7146	3.4046	0.0013638	1.6155	0.00064714	5.0201	0.002011	400.91389036014743	114.35	0.33887	114.36	114.25	114.59	0.0094528					26	15	2	0	0	0	0.85633	1	13793	13793		21.686	3.4237	1	37392	+		23064	17347	15599	15609	26474	26474					0.12319572445653648
KQTELESNH	9	Unmodified	_KQTELESNH_					0	0	0			REV__ENST00000560809.5_1_15:52521487-52536666:-|nuORF	REV__ENST00000560809.5_1_15:52521487-52536666:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.3247680664062	2	543.264727	1084.5149	-0.92551	-0.00050279	4.4296	0.0024064	3.5041	0.0019036	543.2679574968986	38.52	0.12622	39.043	38.952	39.079	0.52235					4	2	2	0	0	0	0.20789	1	3178	3178		39.253	4.1008	1	27846	+		23065	18795	15600	15610	26475	26475					-0.023975272927373226
KQTVRKVRC	9	Unmodified	_KQTVRKVRC_					0	0	0			REV__ENSG00000197063|ENST00000357736|MAFG	REV__ENSG00000197063|ENST00000357736|MAFG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	559.3335571289062	2	559.334767	1116.65498	0.62839	0.00035148	1.8751	0.0010488	2.5035	0.0014003	559.3355410265135	31.357	0.71754	31.347	31.001	31.719	-0.010656					34	16	3	0	0	0	0.7932	1	1729	1729		26.693	2.1737	1	100350	+		23066	23192	15601	15611	26476	26476					0.10131978230629102
KQVARPGN	8	Unmodified	_KQVARPGN_					0	0	0		ENSG00000132464|ENST00000396073|ENAM	ENSG00000132464|ENST00000396073|ENAM	ENSG00000132464|ENST00000396073|ENAM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.251708984375	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.884	1	7202	7202		33.516	6.7195	1	2494100			23067	3796	15602	15612	26477	26477					0.04839453677379879
KQVCFFKILL	10	Unmodified	_KQVCFFKILL_					0	0	0		ENST00000586995.5_3_17:67249715-67270153:-|nuORF	ENST00000586995.5_3_17:67249715-67270153:-|nuORF	ENST00000586995.5_3_17:67249715-67270153:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.36865234375	2	619.87012	1237.72569	0.5439	0.00033715	-1.7646	-0.0010938	-1.2207	-0.00075665	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.46422	1	11262	11262		58.782	18.724	1	1280900			23068	14182	15603	15613	26478	26478					0.11633258495589871
KQVPSKCN	8	Carbamidomethyl (C)	_KQVPSKC(Carbamidomethyl (C))N_	KQVPSKC(1)N		KQVPSKC(71)N		0	1	0		ENSG00000125149|ENST00000219139|PHAF1	ENSG00000125149|ENST00000219139|PHAF1	ENSG00000125149|ENST00000219139|PHAF1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.75006103515625	2	480.750201	959.48585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.639	1	56.04	55.54	56.54	0.40101								0	0	0	0.098789	1	5713	5713		71.296	15.791	1				23069	3374	15604	15614	26479	26479	44				0.00448656877256326
KQVTVINLTQ	10	Unmodified	_KQVTVINLTQ_					0	0	0			REV__nc|ENSG00000053747|Q16787-3|LAMA3	REV__nc|ENSG00000053747|Q16787-3|LAMA3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.3408203125	2	572.340238	1142.66592	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.693	1	16.205	15.705	16.705	-0.48718								0	0	0	0.45132	1	164	164		35.152	1.2304	1		+		23070	16391	15605	15615	26480	26480					0.10029659085898857
KQYFKLTKR	9	Unmodified	_KQYFKLTKR_					0	0	0			REV__ENSG00000171798|ENST00000304613|KNDC1	REV__ENSG00000171798|ENST00000304613|KNDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3701171875	2	606.36659	1210.71863	2.2948	0.0013915	2.4855	0.0015071	4.7803	0.0028986	606.3679986963975	94.415	3.2479	94.356	93.249	96.497	-0.059212					198	76	3	0	0	0	0.7932	1	10039	10039		19.997	1.6724	1	800340	+		23071	21768	15606	15616	26481	26481					0.1216966193933331
KRAAPVIA	8	Unmodified	_KRAAPVIA_					0	0	0			REV__ENST00000521856.1_1_8:55013466-55014395:-|nuORF	REV__ENST00000521856.1_1_8:55013466-55014395:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26666259765625	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.80963	1	2337	2337		15.636	0.97212	1	268720	+		23072	18440	15607	15617	26482	26482					0.10394116205179671
KRAEGAAP	8	Unmodified	_KRAEGAAP_					0	0	0		ENST00000463603.5_1_9:139904522-139905465:-|nuORF	ENST00000463603.5_1_9:139904522-139905465:-|nuORF	ENST00000463603.5_1_9:139904522-139905465:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2250671386719	2	400.224677	798.434801	-0.90021	-0.00036028	3.7777	0.0015119	2.8775	0.0011517	400.22605803281857	41.083	1.6559	41.475	40.867	42.523	0.39209					92	45	3	0	0	0	0.88915	1	3550	3550		35.201	1.6851	1	2260300			23073	12072	15608	15618	26483	26483					0.027520758947048307
KRAEGAAP	8	Unmodified	_KRAEGAAP_					0	0	0		ENST00000463603.5_1_9:139904522-139905465:-|nuORF	ENST00000463603.5_1_9:139904522-139905465:-|nuORF	ENST00000463603.5_1_9:139904522-139905465:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2265319824219	2	400.224677	798.434801	1.1683	0.00046758	3.5853	0.0014349	4.7536	0.0019025	400.2259734207164	34.839	1.4569	35.22	34.977	36.434	0.3812					102	37	3	0	0	0	0.89457	1	2631	2631		37.028	4.2161	1	1604200			23074	12072	15608	15618	26484	26484					0.027520758947048307
KRAETIRFSQ	10	Unmodified	_KRAETIRFSQ_					0	0	0		ENSG00000177807|ENST00000644903|KCNJ10	ENSG00000177807|ENST00000644903|KCNJ10	ENSG00000177807|ENST00000644903|KCNJ10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.345947265625	2	618.346386	1234.67822	2.5351	0.0015676	-3.3685	-0.0020829	-0.83344	-0.00051535	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.85981	1	10661	10661		35.152	0.97948	1	980120			23075	7164	15609	15619	26485	26485					0.0702669554896147
KRAFSIYK	8	Unmodified	_KRAFSIYK_					0	0	0			REV__nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	REV__nc|ENSG00000085511|Q9Y6R4-2|MAP3K4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8002014160156	2	506.800552	1011.58655	0.035087	1.7782E-05	1.482	0.00075107	1.5171	0.00076886	506.80134407750546	51.852	1.4357	51.85	50.901	52.337	-0.0020447					55	33	2	0	0	0	0.89494	1	4437	4437		37.159	5.2042	1	101000	+		23076	16892	15610	15620	26486	26486					0.08122056922411502
KRAKILNKY	9	Unmodified	_KRAKILNKY_					0	0	0		nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3639526367188	2	567.361308	1132.70806	0.36025	0.00020439	3.7236	0.0021126	4.0839	0.002317	567.3632714206227	44.36	2.296	44.409	43.67	45.966	0.048996					151	56	4	0	0	0	0.78536	1	3170	3170		29.15	4.6304	1	1558100			23077	5083	15611	15621	26487	26487					0.14701679284939928
KRANPITGR	9	Unmodified	_KRANPITGR_					0	0	0			REV__ENST00000381151.4_2_21:35469167-35469227:+|nuORF	REV__ENST00000381151.4_2_21:35469167-35469227:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8007507324219	2	506.804157	1011.59376	-1.4266	-0.00072302	-3.9261	-0.0019897	-5.3527	-0.0027128	506.8022071365967	51.979	1.1494	51.979	51.46	52.609	0					48	30	2	0	0	0	0.77696	1	4236	4236		31.53	4.7337	1	87647	+		23078	25959	15612	15622	26488	26488					0.08842789522839212
KRAQHKAVLFI	11	Unmodified	_KRAQHKAVLFI_					0	0	0			REV__ENSG00000237110|ENST00000434551|TAAR9	REV__ENSG00000237110|ENST00000434551|TAAR9	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.6020202636719	3	437.606701	1309.79827	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.238	1	55.238	54.738	55.738	0								0	0	0	0.56276	1	4679	4679		19.263	0.73163	1		+		23079	23793	15613	15623	26489	26489					0.15576728613336854
KRASQKKH	8	Unmodified	_KRASQKKH_					0	0	0		ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-3|CTNNA1;ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1	ENST00000522792.1_1_5:138268134-138269775:+|nuORF;ENSG00000044115|ENST00000302763|CTNNA1	ENST00000522792.1_1_5:138268134-138269775:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.796142578125	2	491.798875	981.583196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.081	1	60.113	59.613	60.613	0.032822								0	0	0	0.29245	1	5577	5577		30.504	2.6214	1				23080	13192;947	15614	15624	26490	26490					0.09166806868415733
KRAVVLLA	8	Unmodified	_KRAVVLLA_					0	0	0		L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|132|3|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|132|3|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|132|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3001708984375	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.80963	1	6640	6640		15.636	0.97212	1	1819800			23081	14644	15615	15625	26491	26491					0.14627262273370434
KRAVVLLA	8	Unmodified	_KRAVVLLA_					0	0	0		L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|132|3|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|132|3|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|132|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3003234863281	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.86294	1	7895	7895		8.8223	0	1	5485100			23082	14644	15615	15625	26492	26492					0.14627262273370434
KRCFLVRP	8	Unmodified	_KRCFLVRP_					0	0	0		nc|ENSG00000107815|Q96RR1-3|TWNK;nc|ENSG00000107815|Q96RR1-2|TWNK;ENSG00000107815|ENST00000311916|TWNK	nc|ENSG00000107815|Q96RR1-3|TWNK	nc|ENSG00000107815|Q96RR1-3|TWNK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8037414550781	2	509.802571	1017.59059	1.253	0.0006388	1.0003	0.00050997	2.2534	0.0011488	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.87922	1	9058	9058		31.955	0.42505	1	3243500			23083	2371	15616	15626	26493	26493					0.08249823144478796
KRCHLRKHN	9	Unmodified	_KRCHLRKHN_					0	0	0			REV__ENSG00000178386|ENST00000434772|ZNF223	REV__ENSG00000178386|ENST00000434772|ZNF223	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.332763671875	2	596.335633	1190.65671	-0.50602	-0.00030176	-4.2486	-0.0025336	-4.7546	-0.0028353	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.78058	1	10284	10284		30.504	0.18592	1	1259900	+		23084	22274	15617	15627	26494	26494					0.06901032039263555
KRCLLHLAV	9	Unmodified	_KRCLLHLAV_					0	0	0		nc|ENSG00000185664|P40967-5|PMEL;nc|ENSG00000185664|P40967-2|PMEL;ENST00000550590.5_1_12:56352149-56359825:-|nuORF;nc|ENSG00000185664|P40967-3|PMEL;nc|ENSG00000185664|P40967-4|PMEL;ENSG00000185664|ENST00000548747|PMEL;ENST00000549413.1_1_12:56355068-56359795:-|nuORF	nc|ENSG00000185664|P40967-5|PMEL;ENST00000549413.1_1_12:56355068-56359795:-|nuORF	ENST00000549413.1_1_12:56355068-56359795:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.361083984375	2	526.823504	1051.63245	0.4252	0.00022401	-3.3052	-0.0017413	-2.88	-0.0015173	526.8216495327123	33.103	0.093079	33.071	33.011	33.104	-0.032677					8	4	3	0	0	0	0.20789	1	1578	1578		40.573	16.37	1	110210			23085	15153;13637	15618	15628	26495	26495					0.10870378833010363
KRCVKGLKM	9	Unmodified	_KRCVKGLKM_					0	0	0		ENSG00000130254|ENST00000252542|SAFB2	ENSG00000130254|ENST00000252542|SAFB2	ENSG00000130254|ENST00000252542|SAFB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8167724609375	2	531.817364	1061.62018	1.0296	0.00054754	-1.9525	-0.0010384	-0.92291	-0.00049082	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.78058	2	8655	8655;8910		30.504	11.144	1	1241100			23086	3627	15619	15629	26496;26497	26496					0.09183019098304612
KRDCGGIVV	9	Unmodified	_KRDCGGIVV_					0	0	0			REV__ENST00000460787.1_1_11:75137492-75141101:-|nuORF	REV__ENST00000460787.1_1_11:75137492-75141101:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.756591796875	2	473.760569	945.506586	-0.29201	-0.00013835	-2.6076	-0.0012354	-2.8997	-0.0013737	473.75965181424857	23.116	0.65585	23.064	22.831	23.487	-0.052114					37	21	2	0	0	0	0.7932	1	819	819		25.574	1.3713	1	26412	+		23087	20155	15620	15630	26498	26498					0.031652472569362544
KRDFRKVVF	9	Unmodified	_KRDFRKVVF_					0	0	0		nc|ENSG00000168259|Q99615-2|DNAJC7;ENSG00000168259|ENST00000457167|DNAJC7	nc|ENSG00000168259|Q99615-2|DNAJC7	nc|ENSG00000168259|Q99615-2|DNAJC7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8555908203125	2	597.858932	1193.70331	-1.2963	-0.00077498	-3.2141	-0.0019216	-4.5103	-0.0026965	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.76255	1	9244	9244		35.618	1.6967	1	2401200			23088	6384	15621	15631	26499	26499					0.11420795142180395
KRDIIKLTGAP	11	Unmodified	_KRDIIKLTGAP_					0	0	0			REV__nc|ENSG00000164398|Q9UKU0-7|ACSL6	REV__nc|ENSG00000164398|Q9UKU0-7|ACSL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.9232177734375	3	404.587195	1210.73976	1.2344	0.00049943	2.6563	0.0010747	3.8907	0.0015741	404.5881712722995	41.372	1.4334	41.378	40.604	42.037	0.0065727					70	37	2	0	0	0	0.76892	1	3039	3039		17.833	0.6664	1	244970	+		23089	21078	15622	15632	26500	26500					0.14281627248215045
KRDLNPASA	9	Unmodified	_KRDLNPASA_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.26715087890625	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.64922	2	8284	8284;8330		44.117	5.3107	1	1182200	+		23090	17833	15623	15633	26501;26502	26501					0.03315401640645632
KRDLNPASA	9	Unmodified	_KRDLNPASA_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.2669677734375	2	486.267073	970.519593	-0.087647	-4.262E-05	0.30406	0.00014785	0.21641	0.00010523	486.26710603472304	86.356	4.0954	86.423	85.117	89.212	0.067444					314	95	4	0	0	0	0.48102	4	8806	8717;8789;8806;8891		52.937	13.684	1	1700900	+		23091	17833	15623	15633	26503;26504;26505;26506	26505					0.03315401640645632
KRDLNPASA	9	Unmodified	_KRDLNPASA_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.26708984375	2	486.267073	970.519593	1.0382	0.00050483	-0.85752	-0.00041699	0.18065	8.7843E-05	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.67345	3	9055	9023;9055;9067		42.396	4.1008	1	1819100	+		23092	17833	15623	15633	26507;26508;26509	26508					0.03315401640645632
KRDLNPASA	9	Unmodified	_KRDLNPASA_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.2671203613281	2	486.267073	970.519593	-1.0938	-0.00053186	1.2715	0.00061828	0.17773	8.6424E-05	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.48102	2	8814	8814;8826		52.937	4.7931	1	1852700	+		23093	17833	15623	15633	26510;26511	26510					0.03315401640645632
KRDLNPASA	9	Unmodified	_KRDLNPASA_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.2671203613281	2	486.267073	970.519593	-0.72648	-0.00035326	0.90847	0.00044176	0.182	8.8499E-05	486.2674012957117	86.085	5.1254	86.27	85.016	90.141	0.18522					327	120	4	0	0	0	0.71772	1	8591	8591		39.253	2.2244	1	1830000	+		23094	17833	15623	15633	26512	26512					0.03315401640645632
KRDLNPASA	9	Unmodified	_KRDLNPASA_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.2670593261719	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.71772	1	8669	8669		39.253	6.4404	1	1702800	+		23095	17833	15623	15633	26513	26513					0.03315401640645632
KRDLNPASA	9	Unmodified	_KRDLNPASA_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.266845703125	2	486.267073	970.519593	-1.6066	-0.00078124	1.8314	0.00089055	0.2248	0.00010932	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.51307	3	8518	8375;8518;8542		51.335	17.82	1	1531500	+		23096	17833	15623	15633	26514;26515;26516	26515					0.03315401640645632
KRDLNPASA	9	Unmodified	_KRDLNPASA_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.26715087890625	2	486.267073	970.519593	-0.74239	-0.000361	0.70437	0.00034251	-0.038029	-1.8492E-05	486.2673170980509	86.118	3.9821	86.565	85.471	89.453	0.44736					252	97	4	0	0	0	0.58668	2	10079	10067;10079		47.657	6.8792	1	1474100	+		23097	17833	15623	15633	26517;26518	26518					0.03315401640645632
KRDLWLPV	8	Unmodified	_KRDLWLPV_					0	0	0			REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8092041015625	2	513.808377	1025.6022	0.14837	7.6233E-05	1.0682	0.00054883	1.2165	0.00062507	513.8088134492856	48.067	1.4161	48.057	47.714	49.13	-0.0093269					122	36	4	0	0	0	0.90465	1	3927	3927		40.573	10.069	1	1557500	+		23098	17137	15624	15634	26519	26519					0.0904234343945518
KRDLWLPV	8	Unmodified	_KRDLWLPV_					0	0	0			REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8090209960938	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.81548	1	4157	4157		20.482	2.1574	1	926440	+		23099	17137	15624	15634	26520	26520					0.0904234343945518
KRDRTELT	8	Unmodified	_KRDRTELT_					0	0	0			REV__nc|ENSG833|P61570|ERVK-25_env	REV__nc|ENSG833|P61570|ERVK-25_env	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7843933105469	2	509.78563	1017.55671	2.0303	0.001035	-3.0954	-0.001578	-1.0651	-0.00054298	509.783792223419	106.11	0.72634	106.24	105.98	106.71	0.12742					70	32	3	0	0	0	0.89494	1	12965	12965		37.159	1.5408	1	602380	+		23100	30313	15625	15635	26521	26521					0.04863073186402289
KREAAHTP	8	Unmodified	_KREAAHTP_					0	0	0		ENST00000606319.1_1_5:476207-476369:+|nuORF	ENST00000606319.1_1_5:476207-476369:+|nuORF	ENST00000606319.1_1_5:476207-476369:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.2453918457031	2	455.248683	908.482814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.997	1	53.014	52.514	53.514	0.017487								0	0	0	0.29596	1	4646	4646		35.618	0	1				23101	14447	15626	15636	26522	26522					0.024911498147389466
KREEKAGEL	9	Unmodified	_KREEKAGEL_					0	0	0		ENSG00000151655|ENST00000358415|ITIH2	ENSG00000151655|ENST00000358415|ITIH2	ENSG00000151655|ENST00000358415|ITIH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2929077148438	2	530.293288	1058.57202	2.0317	0.0010774	-1.9029	-0.0010091	0.12876	6.828E-05	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.69624	1	9686	9686		40.778	0	1	1811300			23102	5133	15627	15637	26523	26523					0.04507939983614051
KREHKLKLLR	10	Unmodified	_KREHKLKLLR_					0	0	0			REV__ENST00000590359.1_1_17:66890978-66899548:-|nuORF	REV__ENST00000590359.1_1_17:66890978-66899548:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.9581298828125	3	440.957734	1319.85137	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.394	1	63.388	62.888	63.888	-0.0055504								0	0	0	0.45132	1	5893	5893		11.097	1.4506	1		+		23103	19674	15628	15638	26524	26524					0.20424106396012576
KREHKRKRHQL	11	Unmodified	_KREHKRKRHQL_					0	0	0			REV__nc|ENSG00000101445|Q96T49-2|PPP1R16B	REV__nc|ENSG00000101445|Q96T49-2|PPP1R16B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.97442626953125	3	505.974558	1514.90185	2.9404	0.0014878	-3.389	-0.0017147	-0.44862	-0.00022699	505.97287794220534	112.87	7.7849	112.84	112.19	119.97	-0.024811					550	277	2	0	0	0	0.79945	1	12441	12441		11.455	1.8085	1	2261500	+		23104	17281	15629	15639	26525	26525					0.1649902877375098
KREISSKLSL	10	Unmodified	_KREISSKLSL_					0	0	0			REV__ENSG00000119906|ENST00000238961|SLF2	REV__ENSG00000119906|ENST00000238961|SLF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.8550415039062	2	580.853512	1159.69247	-1.3518	-0.00078519	1.1119	0.00064587	-0.23986	-0.00013932	580.854032927169	101.52	0.80199	101.68	101.28	102.08	0.15505					27	19	2	0	0	0	0.86621	1	10601	10601		26.063	1.8606	1	149680	+		23105	18384	15630	15640	26526	26526					0.11901347977232035
KREKRVFHSKL	11	Unmodified	_KREKRVFHSKL_					0	0	0			REV__ENST00000503238.5_2_4:48500063-48500156:-|nuORF	REV__ENST00000503238.5_2_4:48500063-48500156:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62457275390625	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.78351	1	12909	12909		14.779	1.2709	1	2577100	+		23106	27841	15631	15641	26527	26527					0.1557490104507906
KREPLYIAS	9	Unmodified	_KREPLYIAS_					0	0	0		L1MA9_dup12488|chr12:104032460-104032879:+|4.706381523448719|0.35838869622059|3.72|63.0|3|1|sense	L1MA9_dup12488|chr12:104032460-104032879:+|4.706381523448719|0.35838869622059|3.72|63.0|3|1|sense	L1MA9_dup12488|chr12:104032460-104032879:+|4.706381523448719|0.35838869622059|3.72|63.0|3|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.8067626953125	2	538.808574	1075.60259	-0.16838	-9.0727E-05	-3.2418	-0.0017467	-3.4102	-0.0018374	538.8067545662908	90.656	4.0484	90.725	89.127	93.176	0.069336					223	95	3	0	0	0	0.78536	1	9252	9252		29.15	7.1897	1	849020			23107	14573	15632	15642	26528	26528					0.06781718368642942
KREPRRYR	8	Unmodified	_KREPRRYR_					0	0	0		ENSG00000146950|ENST00000380913|SHROOM2	ENSG00000146950|ENST00000380913|SHROOM2	ENSG00000146950|ENST00000380913|SHROOM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.8402709960938	2	580.841605	1159.66866	-0.90693	-0.00052678	-0.95612	-0.00055536	-1.8631	-0.0010821	580.8407767096548	69.755	0.8518	69.79	69.548	70.399	0.035622					124	41	4	0	0	0	0.79929	1	6696	6696		18.324	0	1	14836000			23108	4872	15633	15643	26529	26529					0.09520972054087906
KREPRRYR	8	Unmodified	_KREPRRYR_					0	0	0		ENSG00000146950|ENST00000380913|SHROOM2	ENSG00000146950|ENST00000380913|SHROOM2	ENSG00000146950|ENST00000380913|SHROOM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.8405151367188	2	580.841605	1159.66866	0.60129	0.00034925	-2.4927	-0.0014479	-1.8914	-0.0010986	580.839949137506	69.631	0.83281	69.76	69.457	70.29	0.1291					104	40	3	0	0	0	0.87922	1	6321	6321		31.955	0.42505	1	14222000			23109	4872	15633	15643	26530	26530					0.09520972054087906
KRERKRQRHRR	11	Unmodified	_KRERKRQRHRR_					0	0	0			REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.25177001953125	4	402.249086	1604.96724	0.58231	0.00023423	2.6201	0.0010539	3.2024	0.0012881	402.24987265514613	23.151	0.50156	22.577	22.245	22.747	-0.57415					30	12	3	0	0	0	0.89215	1	995	995		3.2113	1.7926	1	111390	+		23110	28507	15634	15644	26531	26531					0.18895443019437153
KRERKRQRHRR	11	Unmodified	_KRERKRQRHRR_					0	0	0			REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		4	402.249086	1604.96724	1.8665	0.0007508	1.7628	0.0007091	3.6293	0.0014599	402.2497794322062	23.313	0.74989	22.916	22.433	23.183	-0.39757	0.16929	-0.00036829	NaN	3.2113	34	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80962	+		23111	28507	15634	15644							0.18895443019437153
KRERKRQRHRR	11	Unmodified	_KRERKRQRHRR_					0	0	0			REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		4	402.249086	1604.96724	0.58231	0.00023423	2.6201	0.0010539	3.2024	0.0012881	402.24987265514613	23.151	0.50156	22.577	22.245	22.747	-0.57415	-0.16929	0.001011	NaN	3.2113	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111390	+		23112	28507	15634	15644							0.18895443019437153
KRETSRVV	8	Unmodified	_KRETSRVV_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79052734375	2	487.790715	973.566878	-1.4525	-0.00070854	0.96091	0.00046872	-0.49164	-0.00023982	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.87479	1	7868	7868		30.504	1.3541	1	503530			23113	5333	15635	15645	26532	26532					0.07903680911658739
KREVLLPE	8	Unmodified	_KREVLLPE_					0	0	0			REV__ENST00000409678.7_2_17:79916248-79917366:-|nuORF	REV__ENST00000409678.7_2_17:79916248-79917366:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2973327636719	2	492.297842	982.581131	0.010803	5.3184E-06	-0.45723	-0.0002251	-0.44643	-0.00021978	492.2974871625459	54.049	1.8007	54.456	53.861	55.661	0.40663					79	42	3	0	0	0	0.87259	2	5501	5455;5501		58.782	4.0056	1	1817100	+		23114	26351	15636	15646	26533;26534	26534					0.08914333339942004
KRFCTGEVL	9	Unmodified	_KRFCTGEVL_					0	0	0			REV__nc|ENSG00000155849|Q92556-2|ELMO1	REV__nc|ENSG00000155849|Q92556-2|ELMO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.7793579101562	2	526.781502	1051.54845	0.4298	0.00022641	-3.4955	-0.0018413	-3.0657	-0.0016149	526.7794673445285	62.586	1.6533	62.553	62.242	63.895	-0.03371					150	73	4	0	0	0	0.76764	1	5963	5963		34.173	0.65696	1	712450	+		23115	20449	15637	15647	26535	26535					0.02473802945451098
KRFCTGEVL	9	Unmodified	_KRFCTGEVL_					0	0	0			REV__nc|ENSG00000155849|Q92556-2|ELMO1	REV__nc|ENSG00000155849|Q92556-2|ELMO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.7802124023438	2	526.781502	1051.54845	-0.17134	-9.0257E-05	-2.8639	-0.0015086	-3.0352	-0.0015989	526.7798231618902	62.475	0.84435	62.589	62.338	63.183	0.11388					86	41	3	0	0	0	0.22631	1	5442	5442		71.296	2.811	1	599530	+		23116	20449	15637	15647	26536	26536					0.02473802945451098
KRFIGKLFI	9	Unmodified	_KRFIGKLFI_					0	0	0			REV__ENST00000348367.8_1_10:113923568-113926199:-|nuORF	REV__ENST00000348367.8_1_10:113923568-113926199:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	561.8648681640625	2	561.363319	1120.71209	-0.54951	-0.00030848	1.3579	0.00076227	0.80838	0.00045379	561.3639017095335	46.054	1.012	46.025	45.497	46.509	-0.028782					47	23	3	0	0	0	0.7932	1	3745	3745		19.36	0	1	192690	+		23117	25328	15638	15648	26537	26537					0.1565576877865169
KRFIKFARVC	10	Unmodified	_KRFIKFARVC_					0	0	0		ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3771362304688	2	634.376435	1266.73832	-0.13776	-8.7389E-05	1.4413	0.00091434	1.3036	0.00082695	634.3771594108364	117.84	0.45279	117.77	117.69	118.15	-0.07531					44	17	3	0	0	0	0.85694	1	12662	12662		21.96	2.8564	1	1053300			23118	1934	15639	15649	26538	26538					0.11561714678487078
KRFIKFARVC	10	Unmodified	_KRFIKFARVC_					0	0	0		ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3744506835938	2	634.376435	1266.73832	0.9338	0.00059238	-0.0047708	-3.0265E-06	0.92903	0.00058935	634.376227424202	109.98	1.2195	110.05	109.76	110.98	0.073685					116	43	3	0	0	0	0.67608	2	11868	11847;11868		45.952	9.5052	1	11835000			23119	1934	15639	15649	26539;26540	26540					0.11561714678487078
KRFIKFARVC	10	Unmodified	_KRFIKFARVC_					0	0	0		ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3757934570312	2	634.376435	1266.73832	-1.1774	-0.00074689	2.2114	0.0014029	1.0341	0.000656	634.3776925529805	109.87	1.6182	109.87	109.32	110.94	0.0060425					148	63	3	0	0	0	0.86718	1	11741	11741		27.882	0	1	2778200			23120	1934	15639	15649	26541	26541					0.11561714678487078
KRFLGKLT	8	Unmodified	_KRFLGKLT_					0	0	0		ENSG00000138411|ENST00000644978|HECW2;ENST00000409111.2_1_2:197184567-197194349:-|nuORF	ENSG00000138411|ENST00000644978|HECW2	ENSG00000138411|ENST00000644978|HECW2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.8105163574219	2	481.810919	961.607286	-0.43797	-0.00021102	0.58518	0.00028195	0.14721	7.093E-05	481.81099748336504	30.434	0.65466	30.438	30.185	30.84	0.0037193					22	14	2	0	0	0	0.91005	1	2002	2002		42.474	3.6683	1	305800			23121	4294	15640	15650	26542	26542					0.12494647302094108
KRFLKIDAEL	10	Unmodified	_KRFLKIDAEL_					0	0	0			REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28	REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.5840148925781	3	411.583562	1231.72886	-0.064664	-2.6615E-05	1.4558	0.0005992	1.3912	0.00057259	411.58409479509044	21.479	1.1219	20.851	20.494	21.616	-0.62834					86	28	4	0	0	0	0.60066	2	812	794;812		50.034	5.0113	1	818940	+		23122	23670	15641	15651	26543;26544	26544					0.12226224873938918
KRFLQLDGAL	10	Unmodified	_KRFLQLDGAL_					0	0	0		nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.840576171875	2	580.842948	1159.67134	-0.88113	-0.0005118	-3.3252	-0.0019314	-4.2063	-0.0024432	580.8408357600173	69.895	0.91608	69.925	69.626	70.542	0.030502					112	46	3	0	0	0	0.8651	1	6651	6651		25.574	2.5316	1	15247000			23123	7298	15642	15652	26545	26545					0.09789382668395774
KRFPIPAK	8	Unmodified	_KRFPIPAK_					0	0	0			REV__nc|ENSG00000165219|Q14C86-4|GAPVD1	REV__nc|ENSG00000165219|Q14C86-4|GAPVD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8044128417969	2	478.805637	955.596721	-1.7576	-0.00084154	2.8169	0.0013487	1.0593	0.0005072	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.84341	1	2639	2639		24.203	4.8428	1	336090	+		23124	21164	15643	15653	26546	26546					0.11714664647661266
KRFPIPAK	8	Unmodified	_KRFPIPAK_					0	0	0			REV__nc|ENSG00000165219|Q14C86-4|GAPVD1	REV__nc|ENSG00000165219|Q14C86-4|GAPVD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.8036804199219	2	478.805637	955.596721	-2.1913	-0.0010492	1.3495	0.00064614	-0.84178	-0.00040305	478.8061406240579	40.099	1.5963	40.688	39.312	40.908	0.58915					89	37	4	0	0	0	0.84341	1	3382	3382		24.203	3.7209	1	1970000	+		23125	21164	15643	15653	26547	26547					0.11714664647661266
KRFPKPTG	8	Unmodified	_KRFPKPTG_					0	0	0			REV__ENST00000529970.5_1_11:120278459-120348246:+|nuORF	REV__ENST00000529970.5_1_11:120278459-120348246:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.77752685546875	2	465.779619	929.544686	-0.69238	-0.0003225	-3.5487	-0.0016529	-4.2411	-0.0019754	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.87922	1	9563	9563		31.955	9.995	1	927810	+		23126	23180	15644	15654	26548	26548					0.07709501233910032
KRFPSLVKQP	10	Unmodified	_KRFPSLVKQP_					0	0	0			REV__ENSG00000160194|ENST00000354250|NDUFV3	REV__ENSG00000160194|ENST00000354250|NDUFV3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5801696777344	3	400.580152	1198.71863	3.4037	0.0013634	-2.3356	-0.00093561	1.068	0.00042784	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.86014	1	13633	13633		23.378	3.3474	1	5321000	+		23127	20700	15645	15655	26549	26549					0.12721661939372098
KRFQLEELRKF	11	Unmodified	_KRFQLEELRKF_					0	0	0		nc|ENSG00000168488|Q8WWM7-6|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;ENSG00000168488|ENST00000336783|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.6229553222656	3	498.624421	1492.85143	-0.6857	-0.00034191	-2.1348	-0.0010645	-2.8205	-0.0014064	498.62329502123123	21.623	1.0354	21.565	21.112	22.147	-0.057203					74	42	2	0	0	0	0.75906	1	655	655		20.03	0.7678	1	54712			23128	6405	15646	15656	26550	26550					0.12472061605353701
KRFRFNSILAL	11	Unmodified	_KRFRFNSILAL_					0	0	0		ENSG00000165804|ENST00000360947|ZNF219	ENSG00000165804|ENST00000360947|ZNF219	ENSG00000165804|ENST00000360947|ZNF219	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.60943603515625	3	455.610223	1363.80884	-0.20528	-9.3526E-05	-3.7927	-0.001728	-3.998	-0.0018215	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.73621	1	7366	7366		25.126	2.5644	1	1835000			23129	6125	15647	15657	26551	26551					0.14148711267807812
KRFRYIILKQK	11	Unmodified	_KRFRYIILKQK_					0	0	0		ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47	ENSG00000085433|ENST00000369962|WDR47	ENSG00000085433|ENST00000369962|WDR47	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.3219299316406	3	498.320672	1491.94019	-1.5014	-0.00074816	3.8642	0.0019256	2.3628	0.0011774	498.322475094846	50.129	1.802	50.129	48.892	50.694	0					100	42	3	0	0	0	0.81219	2	3938	3938;3962		8.7993	2.7983	1	141070			23130	1530	15648	15658	26552;26553	26552					0.21389521635683195
KRFRYIILKQK	11	Unmodified	_KRFRYIILKQK_					0	0	0		ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47	ENSG00000085433|ENST00000369962|WDR47	ENSG00000085433|ENST00000369962|WDR47	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.322265625	3	498.320672	1491.94019	-1.486	-0.00074053	3.8878	0.0019374	2.4018	0.0011968	498.3225144803097	50.947	1.1661	50.947	50.576	51.742	0					63	30	3	0	0	0	0.81219	1	4106	4106		8.7993	3.1005	1	270970			23131	1530	15648	15658	26554	26554					0.21389521635683195
KRFRYIILKQK	11	Unmodified	_KRFRYIILKQK_					0	0	0		ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47	ENSG00000085433|ENST00000369962|WDR47	ENSG00000085433|ENST00000369962|WDR47	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.98980712890625	3	498.320672	1491.94019	-0.64982	-0.00032382	2.8522	0.0014213	2.2024	0.0010975	498.32204903000945	49.584	1.8955	49.56	48.444	50.34	-0.024033					99	42	3	0	0	0	0.86283	1	4292	4292		5.1424	1.7337	1	215190			23132	1530	15648	15658	26555	26555					0.21389521635683195
KRFRYIILKQK	11	Unmodified	_KRFRYIILKQK_					0	0	0		ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47	ENSG00000085433|ENST00000369962|WDR47	ENSG00000085433|ENST00000369962|WDR47	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.3213806152344	3	498.320672	1491.94019	-0.6158	-0.00030686	2.9055	0.0014479	2.2897	0.001141	498.3219998952032	49.831	1.8637	49.858	48.678	50.542	0.026958					119	49	3	0	0	0	0.81021	2	3854	3854;3880		9.2118	3.513	1	161210			23133	1530	15648	15658	26556;26557	26556					0.21389521635683195
KRFRYIILKQK	11	Unmodified	_KRFRYIILKQK_					0	0	0		ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47	ENSG00000085433|ENST00000369962|WDR47	ENSG00000085433|ENST00000369962|WDR47	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.6573486328125	3	498.320672	1491.94019	0.32616	0.00016253	1.8507	0.00092225	2.1769	0.0010848	498.32158062820537	48.032	0.86749	48.07	47.766	48.633	0.037731					68	25	3	0	0	0	0.81892	1	3631	3631		8.0344	2.0333	1	260350			23134	1530	15648	15658	26558	26558					0.21389521635683195
KRFRYIILKQK	11	Unmodified	_KRFRYIILKQK_					0	0	0		ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47	ENSG00000085433|ENST00000369962|WDR47	ENSG00000085433|ENST00000369962|WDR47	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.6554260253906	3	498.320672	1491.94019	0.34098	0.00016992	1.9378	0.00096567	2.2788	0.0011356	498.3215489235199	49.794	1.8345	49.837	48.67	50.505	0.04224					99	45	3	0	0	0	0.81021	1	3920	3920		9.2118	3.513	1	194850			23135	1530	15648	15658	26559	26559					0.21389521635683195
KRFRYIILKQK	11	Unmodified	_KRFRYIILKQK_					0	0	0		ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47	ENSG00000085433|ENST00000369962|WDR47	ENSG00000085433|ENST00000369962|WDR47	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.65594482421875	3	498.320672	1491.94019	0.35108	0.00017495	2.5233	0.0012574	2.8744	0.0014324	498.32180738572106	50.996	1.0383	51.046	50.409	51.447	0.049896					72	32	3	0	0	0	0.18159	1	4012	4012		8.4073	5.1959	1	332530			23136	1530	15648	15658	26560	26560					0.21389521635683195
KRFSLFGK	8	Unmodified	_KRFSLFGK_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7957458496094	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.87064	1	4505	4505		29.15	1.2673	1	781720			23137	2832	15649	15659	26561	26561					0.08446074268010761
KRFSLFGK	8	Unmodified	_KRFSLFGK_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7960205078125	2	491.795269	981.575986	-0.70573	-0.00034708	1.5523	0.0007634	0.84654	0.00041632	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.80706	1	4320	4320		19.36	0	1	772710			23138	2832	15649	15659	26562	26562					0.08446074268010761
KRFSSLKF	8	Unmodified	_KRFSSLKF_					0	0	0			REV__ENST00000470752.5_1_2:175488218-175494412:-|nuORF	REV__ENST00000470752.5_1_2:175488218-175494412:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.80035400390625	2	506.800552	1011.58655	-1.5095	-0.000765	2.422	0.0012274	0.91248	0.00046244	506.8017338500082	46.598	2.104	46.598	45.336	47.44	0					97	57	2	0	0	0	0.87922	1	3421	3421		31.955	0	1	294110	+		23139	27216	15650	15660	26563	26563					0.0812205692243424
KRFTVYKVLV	10	Unmodified	_KRFTVYKVLV_					0	0	0		nc|ENSG00000288602|Q96BR1-2|SGK3;ENSG00000104205|ENST00000521198|SGK3	nc|ENSG00000288602|Q96BR1-2|SGK3	nc|ENSG00000288602|Q96BR1-2|SGK3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.26666259765625	3	418.264053	1251.77033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.662	1	49.568	49.068	50.068	-0.093178								0	0	0	0.45132	1	3857	3857		16.007	1.228	1				23140	2118	15651	15661	26564	26564					0.1545140563325731
KRFVCSGAAS	10	Unmodified	_KRFVCSGAAS_					0	0	0		ENST00000380877.7_1_15:50601985-50647294:-|nuORF;ENST00000543881.5_1_15:50596308-50647294:-|nuORF;ENST00000560825.5_1_15:50601982-50647300:-|nuORF;ENST00000558970.2_1_15:50606818-50647294:-|nuORF	ENST00000380877.7_1_15:50601985-50647294:-|nuORF	ENST00000380877.7_1_15:50601985-50647294:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.3788452148438	2	513.263476	1024.5124	-0.16545	-8.492E-05	0.78806	0.00040448	0.62261	0.00031956	513.264511946802	86	1.0262	86.448	85.904	86.93	0.44736					31	24	2	0	0	0	0.37624	1	10027	10027		34.173	15.848	1	151870			23141	10938	15652	15662	26565	26565					0.0011234576857077627
KRFYSKAI	8	Unmodified	_KRFYSKAI_					0	0	0			REV__ENSG00000165105|ENST00000376447|RASEF	REV__ENSG00000165105|ENST00000376447|RASEF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8006591796875	2	506.800552	1011.58655	-0.45827	-0.00023225	1.7811	0.00090266	1.3228	0.00067041	506.80143278621483	53.641	1.4346	53.616	53.128	54.562	-0.024754					61	37	2	0	0	0	0.86677	1	4777	4777		27.882	3.6795	1	166920	+		23142	21147	15653	15663	26566	26566					0.08122056922411502
KRGAIVSEPAI	11	Unmodified	_KRGAIVSEPAI_					0	0	0		nc|ENSG00000137177|Q9H1H9-3|KIF13A;nc|ENSG00000137177|Q9H1H9-4|KIF13A;nc|ENSG00000137177|Q9H1H9-2|KIF13A;ENSG00000137177|ENST00000259711|KIF13A	nc|ENSG00000137177|Q9H1H9-3|KIF13A	nc|ENSG00000137177|Q9H1H9-3|KIF13A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.839111328125	2	570.840405	1139.66626	1.4099	0.00080484	-3.9627	-0.0022621	-2.5528	-0.0014572	570.8381986387325	50.383	0.69075	51.148	50.854	51.545	0.76494					40	16	3	0	0	0	0.69248	1	4965	4965		32.751	2.4328	1	2916800			23143	4176	15654	15664	26567	26567					0.10201078805766883
KRGEYIKT	8	Unmodified	_KRGEYIKT_					0	0	0		ENSG00000142208|ENST00000649815|AKT1;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2;ENSG00000105221|ENST00000392038|AKT2	ENSG00000142208|ENST00000649815|AKT1	ENSG00000142208|ENST00000649815|AKT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.78875732421875	2	497.787641	993.56073	-0.77821	-0.00038738	0.28046	0.00013961	-0.49775	-0.00024777	497.7877730661561	26.959	1.6901	26.784	26.205	27.895	-0.17559					78	37	4	0	0	0	0.60357	1	1488	1488		71.296	1.6681	1	5085600			23144	4550	15655	15665	26568	26568					0.0636916268015284
KRGGLLIL	8	Unmodified	_KRGGLLIL_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.30010986328125	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.80706	11	6453	6381;6420;6453;6486;6495;6590;6761;6794;6827;6851;6941		26.796	12.132	1	1072400	+		23145	22094	15656	15666	26569;26570;26571;26572;26573;26574;26575;26576;26577;26578;26579	26571					0.14627262273381803
KRGGLLIL	8	Unmodified	_KRGGLLIL_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.30035400390625	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.81548	4	7180	6761;6885;7030;7180		20.482	1.5685	1	1680500	+		23146	22094	15656	15666	26580;26581;26582;26583	26583					0.14627262273381803
KRGGLLIL	8	Unmodified	_KRGGLLIL_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.30023193359375	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.81724	3	6920	6920;6993;7121		14.664	0.88877	1	1702600	+		23147	22094	15656	15666	26584;26585;26586	26584					0.14627262273381803
KRGGLLIL	8	Unmodified	_KRGGLLIL_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.30010986328125	2	435.300188	868.585822	-0.33292	-0.00014492	0.65367	0.00028454	0.32075	0.00013962	435.30030600334584	75.563	1.7203	75.517	74.991	76.711	-0.045975					102	48	3	0	0	0	0.80963	2	7447	7437;7447		15.636	5.8418	1	492420	+		23148	22094	15656	15666	26587;26588	26588					0.14627262273381803
KRGGLLIL	8	Unmodified	_KRGGLLIL_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3000793457031	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81724	2	6873	6808;6873		14.664	5.1935	1	1921500	+		23149	22094	15656	15666	26589;26590	26590					0.14627262273381803
KRGGLLIL	8	Unmodified	_KRGGLLIL_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3000183105469	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.81724	6	6449	6449;6467;6584;6594;6603;6686		14.664	5.1935	1	2081500	+		23150	22094	15656	15666	26591;26592;26593;26594;26595;26596	26591					0.14627262273381803
KRGGLLIL	8	Unmodified	_KRGGLLIL_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2998962402344	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.81724	3	6488	6488;6496;6524		14.664	1.7049	1	1819800	+		23151	22094	15656	15666	26597;26598;26599	26597					0.14627262273381803
KRGGLLIL	8	Unmodified	_KRGGLLIL_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3002014160156	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.81724	2	6517	6488;6517		14.664	1.7049	1	1852500	+		23152	22094	15656	15666	26600;26601	26601					0.14627262273381803
KRGGLLIL	8	Unmodified	_KRGGLLIL_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.30029296875	2	435.300188	868.585822	-1.3785	-0.00060007	1.5278	0.00066505	0.14927	6.4979E-05	435.30073733409733	75.396	1.3729	75.483	74.943	76.316	0.087639					63	36	2	0	0	0	0.81724	2	6936	6936;7043		14.664	4.3048	1	527430	+		23153	22094	15656	15666	26602;26603	26602					0.14627262273381803
KRGGLLIL	8	Unmodified	_KRGGLLIL_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2998352050781	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.81548	6	7694	7656;7694;7754;7811;7835;8591		20.482	0.88877	1	5485100	+		23154	22094	15656	15666	26604;26605;26606;26607;26608;26609	26605					0.14627262273381803
KRGGLLIL	8	Unmodified	_KRGGLLIL_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30419921875	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81548	3	8597	7729;7804;8597		21.702	4.8456	1	6323600	+		23155	22094	15656	15666	26610;26611;26612	26612					0.14627262273381803
KRGGSRSK	8	Unmodified	_KRGGSRSK_					0	0	0			REV__nc|ENSG00000127603|O94854|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1	REV__nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2626953125	2	438.262125	874.509697	0.33792	0.0001481	2.2082	0.00096776	2.5461	0.0011159	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.84341	1	3677	3677		24.203	1.1603	1	4268300	+		23156	18743;29829	15657	15667	26613	26613					0.06742258425947512
KRGKALSN	8	Unmodified	_KRGKALSN_					0	0	0		ENST00000504452.5_1_4:81118222-81118786:+|nuORF	ENST00000504452.5_1_4:81118222-81118786:+|nuORF	ENST00000504452.5_1_4:81118222-81118786:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26544189453125	2	437.266876	872.519199	0.03062	1.3389E-05	-2.6363	-0.0011528	-2.6057	-0.0011394	437.2656144717129	22.266	1.1262	22.354	22.073	23.199	0.088013					130	57	3	0	0	0	0.86288	1	677	677		26.796	5.0938	1	2198600			23157	12904	15658	15668	26614	26614					0.07784026711453862
KRGKEQASSV	10	Unmodified	_KRGKEQASSV_					0	0	0			REV__ENST00000481436.5_1_5:177642388-177652501:-|nuORF;REV__ENSG00000175309|ENST00000308158|PHYKPL	REV__ENSG00000175309|ENST00000308158|PHYKPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3004150390625	2	545.304187	1088.59382	-0.48127	-0.00026244	4.0551	0.0022112	3.5738	0.0019488	545.3063656741804	60.206	0.53917	60.207	59.973	60.512	0.00051498					29	16	2	0	0	0	0.82886	1	5211	5211		37.812	0.65241	1	128560	+		23158	27439;22059	15659	15669	26615	26615					0.05306744732183688
KRGKPLKEG	9	Unmodified	_KRGKPLKEG_					0	0	0			REV__ENSG00000182952|ENST00000377575|HMGN4	REV__ENSG00000182952|ENST00000377575|HMGN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.8165588378906	2	506.816733	1011.61891	0.41792	0.00021181	2.11	0.0010694	2.5279	0.0012812	506.8176154264681	60.747	0.83125	61.3	60.891	61.723	0.55323					53	25	3	0	0	0	0.6204	1	6489	6489		45.972	7.1661	1	2082900	+		23159	22561	15660	15670	26616	26616					0.1135684432541666
KRGLLLLRHTC	11	Unmodified	_KRGLLLLRHTC_					0	0	0			REV__chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS	REV__chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2677307128906	3	437.267691	1308.78124	-1.0895	-0.00047642	1.3912	0.00060833	0.30167	0.00013191	437.2682076309449	48.376	1.4718	48.845	48.119	49.591	0.46941					123	36	4	0	0	0	0.75779	1	4686	4686		20.315	0	1	3096400	+		23160	15781	15661	15671	26617	26617					0.139204847359224
KRGLPCWCAC	10	Carbamidomethyl (C)	_KRGLPCWCAC(Carbamidomethyl (C))_	KRGLPC(0.001)WC(0.03)AC(0.969)		KRGLPC(-28)WC(-15)AC(15)		0	1	0			REV__ENSG00000198722|ENST00000635942|UNC13B	REV__ENSG00000198722|ENST00000635942|UNC13B	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.2734375	2	597.272464	1192.53037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.464	1	55.428	54.928	55.928	-0.036827								0	0	0	0.45132	1	4649	4649		40.573	10.069	3		+		23161	23365	15662	15672	26618	26618	285				-0.058189785725744514
KRGPKPKRL	9	Unmodified	_KRGPKPKRL_					0	0	0		ENSG00000100307|ENST00000216133|CBX7	ENSG00000100307|ENST00000216133|CBX7	ENSG00000100307|ENST00000216133|CBX7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	540.3639526367188	2	540.361642	1078.70873	-1.4718	-0.00079528	-3.9469	-0.0021328	-5.4187	-0.002928	540.3593515673492	36.742	1.4181	36.742	36.293	37.711	0					69	32	3	0	0	0	0.7932	2	2128	2128;2153		16.473	2.6978	1	257620			23162	1823	15663	15673	26619;26620	26619					0.17252518724649235
KRGPKPKRL	9	Unmodified	_KRGPKPKRL_					0	0	0		ENSG00000100307|ENST00000216133|CBX7	ENSG00000100307|ENST00000216133|CBX7	ENSG00000100307|ENST00000216133|CBX7	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	540.3613891601562	2	540.361642	1078.70873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.673	1	44.673	44.173	45.173	0								0	0	0	0.32758	1	3252	3252		20.947	9.4359	1				23163	1823	15663	15673	26621	26621					0.17252518724649235
KRGQSKKISPK	11	Unmodified	_KRGQSKKISPK_					0	0	0			REV__ENSG00000104371|ENST00000220812|DKK4	REV__ENSG00000104371|ENST00000220812|DKK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.59942626953125	3	419.598094	1255.77245	1.7793	0.00074657	1.9244	0.00080747	3.7036	0.001554	419.5987701797605	24.325	1.1367	23.811	23.408	24.544	-0.51365					65	23	4	0	0	0	0.67762	1	1142	1142		35.178	3.544	1	934580	+		23164	17453	15664	15674	26622	26622					0.15479834371058132
KRGRRDARE	9	Unmodified	_KRGRRDARE_					0	0	0			REV__nc|ENSG00000160183|P57727-4|TMPRSS3	REV__nc|ENSG00000160183|P57727-4|TMPRSS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.846435546875	2	572.326319	1142.63809	0.29446	0.00016853	-0.86679	-0.00049609	-0.57233	-0.00032756	572.3271025491963	16.941	0.25168	16.454	16.369	16.62	-0.48718					7	5	2	0	0	0	0.7932	1	211	211		26.693	1.1189	1	19880	+		23165	29963	15665	15675	26623	26623					0.07247193669036278
KRGRRHHRL	9	Unmodified	_KRGRRHHRL_					0	0	0			REV__ENST00000264649.10_1_17:40635081-40635123:+|nuORF	REV__ENST00000264649.10_1_17:40635081-40635123:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.7062377929688	2	608.373938	1214.73332	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.94	1	108.03	107.53	108.53	0.084457								0	0	0	0.36138	1	13170	13170		3.6843	0.27433	1		+		23166	24475	15666	15676	26624	26624					0.13454591650747716
KRGRRKRPRRR	11	Unmodified	_KRGRRKRPRRR_					0	0	0			REV__ENST00000600059.5_1_19:48988799-49002658:-|nuORF	REV__ENST00000600059.5_1_19:48988799-49002658:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.0044860839844	3	508.001442	1520.9825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.605	1	15.663	15.163	16.163	0.057872								0	0	0	0.56276	1	52	52		9.6461	2.2464	1				23167	29307	15667	15677	26625	26625					0.24284354607243586
KRGRWPGPKAL	11	Unmodified	_KRGRWPGPKAL_					0	0	0		ENST00000420610.1_1_Y:14088999-14090148:+|nuORF	ENST00000420610.1_1_Y:14088999-14090148:+|nuORF	ENST00000420610.1_1_Y:14088999-14090148:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5923156738281	3	422.591163	1264.75166	-0.026175	-1.1061E-05	3.5111	0.0014837	3.4849	0.0014727	422.59256755528145	49.138	2.4235	49.133	48.474	50.898	-0.0056419					208	62	5	0	0	0	0.74771	1	4193	4193		22.562	2.5311	1	1959300			23168	11455	15668	15678	26626	26626					0.12987288782096584
KRGSQSPAP	9	Unmodified	_KRGSQSPAP_					0	0	0		ENST00000610085.1_1_7:148395223-148395484:-|nuORF	ENST00000610085.1_1_7:148395223-148395484:-|nuORF	ENST00000610085.1_1_7:148395223-148395484:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2533874511719	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.78124	1	8660	8660		30.318	3.5216	1	1673200			23169	14494	15669	15679	26627	26627					0.027191324691784757
KRGSVFMCSI	10	Unmodified	_KRGSVFMCSI_					0	0	0		ENSG00000175809|ENST00000323684|CBLL2	ENSG00000175809|ENST00000323684|CBLL2	ENSG00000175809|ENST00000323684|CBLL2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	564.314453125	2	564.288637	1126.56272	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.867	1	56.9	56.4	57.4	0.033184								0	0	0	0.45132	1	5151	5151		37.812	0.65241	1				23170	7037	15670	15680	26628	26628					0.004501321020825344
KRGVAPVSRPP	11	Unmodified	_KRGVAPVSRPP_					0	0	0		nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L;ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L	nc|ENSG00000121210|A2VDJ0-2|TMEM131L	nc|ENSG00000121210|A2VDJ0-2|TMEM131L	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3538208007812	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.85	1	118.83	118.33	119.33	-0.024208								0	0	0	0.56276	1	13169	13169		21.686	5.2126	1				23171	3169	15671	15681	26629	26629					0.1186360713677459
KRGVFTKRQ	9	Unmodified	_KRGVFTKRQ_					0	0	0		ENSG00000121053|ENST00000225371|EPX	ENSG00000121053|ENST00000225371|EPX	ENSG00000121053|ENST00000225371|EPX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3406982421875	2	560.340907	1118.66726	-1.4185	-0.00079484	0.46581	0.00026101	-0.95269	-0.00053383	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	1	12913	12913		23.042	1.0826	1	4071000			23172	3162	15672	15682	26630	26630					0.11267337965318802
KRGVRRPD	8	Unmodified	_KRGVRRPD_					0	0	0		ENST00000532818.5_2_11:62473033-62477109:-|nuORF	ENST00000532818.5_2_11:62473033-62477109:-|nuORF	ENST00000532818.5_2_11:62473033-62477109:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.2977294921875	2	492.296499	982.578445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.311	1	65.276	64.776	65.776	-0.034798								0	0	0	0.29264	1	6263	6263		29.15	0	1				23173	13385	15673	15683	26631	26631					0.08645922725645505
KRHAKPGG	8	Unmodified	_KRHAKPGG_					0	0	0			REV__ENST00000471092.1_1_6:41614003-41617640:+|nuORF	REV__ENST00000471092.1_1_6:41614003-41617640:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.24560546875	2	425.753936	849.493319	0.62187	0.00026476	-3.5487	-0.0015109	-2.9268	-0.0012461	425.75233705969686	88.354	0.60387	88.505	88.158	88.761	0.15055					23	14	2	0	0	0	0.4196	1	8735	8735		14.664	8.3514	1	98925	+		23174	17952	15674	15684	26632	26632					0.06255177259856737
KRHILTCV	8	Unmodified	_KRHILTCV_					0	0	0			REV__ENSG00000196862|ENST00000408999|RGPD4;REV__nc|ENSG00000187627|P0DJD0|RGPD1;REV__nc|ENSG00000183054|Q99666-2|RGPD5;REV__ENSG00000153201|ENST00000283195|RANBP2	REV__nc|ENSG00000187627|P0DJD0|RGPD1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2845458984375	2	485.286754	968.558955	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.353	1	74.484	73.984	74.984	0.13126								0	0	0	0.29703	1	6874	6874		37.159	0.13063	1		+		23175	22758;20335;16211;20336	15675	15685	26633	26633					0.07341830390521409
KRHKLSCR	8	Unmodified	_KRHKLSCR_					0	0	0			REV__ENST00000579081.5_2_17:29626598-29701170:+|nuORF	REV__ENST00000579081.5_2_17:29626598-29701170:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.2979125976562	2	514.300727	1026.5869	-0.73299	-0.00037698	-3.4135	-0.0017556	-4.1465	-0.0021326	514.2990191535417	96.746	3.1495	96.746	95.529	98.678	0					118	74	2	0	0	0	0.884	1	9697	9697		33.516	3.1979	1	424760	+		23176	23165	15676	15686	26634	26634					0.0746715337063506
KRHKSSSS	8	Unmodified	_KRHKSSSS_					0	0	0		nc|ENSG00000138398|Q13427-2|PPIG;chr2:169636162-169636413|57|12.14|0.35|5.12|+|ENST00000678638|PPIG,PPIG;ENSG00000138398|ENST00000260970|PPIG	nc|ENSG00000138398|Q13427-2|PPIG	nc|ENSG00000138398|Q13427-2|PPIG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7518615722656	2	458.75159	915.488627	1.1793	0.00054099	0.20947	9.6095E-05	1.3887	0.00063709	458.75130962594056	23.717	1.8273	23.143	22.747	24.574	-0.57415					83	41	4	0	0	0	0.90465	1	1071	1071		40.573	0	1	885740			23177	314	15677	15687	26635	26635					0.02750248326435667
KRHLHSDS	8	Unmodified	_KRHLHSDS_					0	0	0		ENSG00000135355|ENST00000369352|GJA10	ENSG00000135355|ENST00000369352|GJA10	ENSG00000135355|ENST00000369352|GJA10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.258056640625	2	490.25704	978.499526	1.5736	0.00077149	0.44195	0.00021667	2.0156	0.00098816	490.25714425919216	107.1	2.1346	107.2	105.77	107.9	0.10396					168	84	3	0	0	0	0.87064	1	13087	13087		29.15	1.2673	1	1431500			23178	4010	15678	15688	26636	26636					0.009416507007017572
KRHQKKRMHDK	11	Unmodified	_KRHQKKRMHDK_					0	0	0			REV__ENSG00000198839|ENST00000361822|ZNF277	REV__ENSG00000198839|ENST00000361822|ZNF277	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.951904296875	3	497.952766	1490.83647	-0.26391	-0.00013141	-2.7107	-0.0013498	-2.9746	-0.0014812	497.9513595269569	17.389	0.40384	17.31	17.13	17.534	-0.079056					39	17	3	0	0	0	0.76251	1	209	209		19.263	2.0959	1	123420	+		23179	23394	15679	15689	26637	26637					0.11068291256356133
KRHQKKRMHDK	11	Unmodified	_KRHQKKRMHDK_					0	0	0			REV__ENSG00000198839|ENST00000361822|ZNF277	REV__ENSG00000198839|ENST00000361822|ZNF277	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.9519348144531	3	497.952766	1490.83647	-0.76848	-0.00038267	-2.5363	-0.001263	-3.3048	-0.0016456	497.9514380299923	24.167	0.79495	24.123	23.735	24.53	-0.043221					52	19	4	0	0	0	0.76579	1	879	879		18.531	3.8374	1	93776	+		23180	23394	15679	15689	26638	26638					0.11068291256356133
KRIEKGRP	8	Unmodified	_KRIEKGRP_					0	0	0			REV__ENST00000460026.6_1_X:101854673-101856400:+|nuORF	REV__ENST00000460026.6_1_X:101854673-101856400:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2967529296875	2	492.309075	982.603597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.16	1	60.254	59.754	60.754	0.094059								0	0	0	0.2939	1	5190	5190		27.882	1.1893	1		+		23181	24259	15680	15690	26639	26639					0.11159977528234322
KRIFYKHRKRR	11	Unmodified	_KRIFYKHRKRR_					0	0	0		nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2412719726562	3	529.998815	1586.97462	-0.054286	-2.8772E-05	3.9979	0.0021189	3.9436	0.0020901	530.3351530503622	111.31	0.3176	111.42	111.31	111.63	0.11118					11	9	2	0	0	0	0.18372	1	11999	11999		6.3209	2.9122	1	13485			23182	15368	15681	15691	26640	26640					0.20460782567124625
KRIFYKHRKRR	11	Unmodified	_KRIFYKHRKRR_					0	0	0		nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	529.998815	1586.97462	0.83187	0.00044089	5.2094	0.002761	6.0412	0.0032018	530.335976969152	111.42	0.17285	111.49	111.42	111.59	0.069542	0.035375	0.00085866	NaN	6.3209	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16480			23183	15368	15681	15691							0.20460782567124625
KRIGPCLLP	9	Unmodified	_KRIGPCLLP_					0	0	0		ENST00000424094.6_1_20:57394223-57417237:-|nuORF	ENST00000424094.6_1_20:57394223-57417237:-|nuORF	ENST00000424094.6_1_20:57394223-57417237:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.80316162109375	2	498.80478	995.595007	-1.4653	-0.00073091	-0.76785	-0.00038301	-2.2332	-0.0011139	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.7932	1	4384	4384		23.042	1.3402	1	2964600			23184	11510	15682	15692	26641	26641					0.09703287567390362
KRIGRPMVAS	10	Unmodified	_KRIGRPMVAS_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.8292846679688	2	557.829317	1113.64408	3.0808	0.0017186	-0.29203	-0.0001629	2.7888	0.0015557	557.8291525228157	101	1.6416	100.95	100.53	102.17	-0.052116					75	38	3	0	0	0	0.8651	1	10985	10985		25.574	2.0514	1	714690			23185	14916	15683	15693	26642	26642					0.09180575856362339
KRIGRPMVAS	10	Unmodified	_KRIGRPMVAS_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	557.8297729492188	2	557.829317	1113.64408	-1.4267	-0.00079583	4.1914	0.0023381	2.7648	0.0015423	557.8315827372627	100.97	1.6229	101.12	100.62	102.24	0.15505					78	39	3	0	0	0	0.86763	1	10508	10508		26.693	4.1133	1	900390			23186	14916	15683	15693	26643	26643					0.09180575856362339
KRIKQHKAII	10	Unmodified	_KRIKQHKAII_					0	0	0		ENSG00000081913|ENST00000262719|PHLPP1;nc|ENSG00000081913|O60346-2|PHLPP1	ENSG00000081913|ENST00000262719|PHLPP1	ENSG00000081913|ENST00000262719|PHLPP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7660217285156	3	412.275063	1233.80336	-1.4683	-0.00060532	-3.8314	-0.0015796	-5.2997	-0.0021849	412.27348241620786	40.491	0.52048	41.08	40.759	41.28	0.58915					27	14	2	0	0	0	0.37624	1	3490	3490		15.333	5.2292	1	631380			23187	1474	15684	15694	26644	26644					0.19581032475980464
KRILALLA	8	Unmodified	_KRILALLA_					0	0	0		ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.3143615722656	2	449.315838	896.617122	0.030616	1.3756E-05	-2.674	-0.0012015	-2.6434	-0.0011877	449.3144775449266	21.709	1.5646	21.081	20.162	21.727	-0.62835					91	40	3	0	0	0	0.86791	1	811	811		28.254	0	1	615330			23188	9022	15685	15695	26645	26645					0.1646783530745779
KRILIAIA	8	Unmodified	_KRILIAIA_					0	0	0		nc|ENSG00000129353|Q8IWA5-3|SLC44A2;ENSG00000129353|ENST00000335757|SLC44A2;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;ENST00000588465.5_1_19:10713206-10745972:+|nuORF	nc|ENSG00000129353|Q8IWA5-3|SLC44A2	nc|ENSG00000129353|Q8IWA5-3|SLC44A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.3141784667969	2	449.315838	896.617122	0.030616	1.3756E-05	-2.674	-0.0012015	-2.6434	-0.0011877	449.3144775449266	21.709	1.5646	21.081	20.162	21.727	-0.62835					91	40	3	0	0	0	0.82464	1	823	823		21.702	0	1	615330			23189	3585	15686	15696	26646	26646					0.1646783530745779
KRILILTHQ	9	Unmodified	_KRILILTHQ_					0	0	0		ENST00000497715.1_1_2:225344606-225344747:-|nuORF	ENST00000497715.1_1_2:225344606-225344747:-|nuORF	ENST00000497715.1_1_2:225344606-225344747:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3635864257812	2	561.361308	1120.70806	-0.061787	-3.4685E-05	3.5032	0.0019666	3.4414	0.0019319	561.3631099932169	44.376	1.0511	44.826	44.16	45.211	0.45024					79	25	4	0	0	0	0.74721	1	4077	4077		37.159	6.6555	1	3514300			23190	12813	15687	15697	26647	26647					0.15253679284933241
KRILILTHQ	9	Unmodified	_KRILILTHQ_					0	0	0		ENST00000497715.1_1_2:225344606-225344747:-|nuORF	ENST00000497715.1_1_2:225344606-225344747:-|nuORF	ENST00000497715.1_1_2:225344606-225344747:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3632202148438	2	561.361308	1120.70806	-1.1522	-0.00064679	4.3288	0.00243	3.1766	0.0017832	561.3636203796618	43.91	1.2503	44.684	44.223	45.473	0.7738					84	30	4	0	0	0	0.77244	1	4053	4053		32.812	4.9302	1	1618600			23191	12813	15687	15697	26648	26648					0.15253679284933241
KRILLRLPS	9	Unmodified	_KRILLRLPS_					0	0	0		ENST00000568983.5_1_16:89811164-89816202:-|nuORF;ENST00000305699.15_1_16:89806300-89831390:-|nuORF;nc|ENSG00000187741|O15360-3|FANCA;ENSG00000187741|ENST00000389301|FANCA	ENST00000568983.5_1_16:89811164-89816202:-|nuORF	ENST00000568983.5_1_16:89811164-89816202:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.3739624023438	2	548.371675	1094.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.377	1	37.316	36.816	37.816	-0.060333								0	0	0	0.31117	1	2133	2133		26.693	6.6961	1				23192	7876	15688	15698	26649	26649					0.18522269664595115
KRIPAGRGQ	9	Unmodified	_KRIPAGRGQ_					0	0	0			REV__chr1:29280141-29291869|31|18.97|0.43|5.45|+|1|PTPRU,PTPRU|1	REV__chr1:29280141-29291869|31|18.97|0.43|5.45|+|1|PTPRU,PTPRU|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958679199219	2	491.798875	981.583196	-1.796	-0.00088329	-4.3545	-0.0021416	-6.1506	-0.0030248	491.7966581870457	51.567	1.6539	51.579	50.697	52.351	0.012436					117	46	3	0	0	0	0.7932	1	4380	4380		24.203	2.2429	1	354980	+		23193	15445	15689	15699	26650	26650					0.09166806868415733
KRIPNQAS	8	Unmodified	_KRIPNQAS_					0	0	0			REV__ENST00000609924.1_1_18:3246797-3247004:-|nuORF	REV__ENST00000609924.1_1_18:3246797-3247004:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.26275634765625	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.87064	1	7461	7461		29.15	2.3535	1	1262800	+		23194	29422	15690	15700	26651	26651					0.054357228488470355
KRIQIWLFLLV	11	Unmodified	_KRIQIWLFLLV_					0	0	0			REV__ENST00000562945.2_1_16:34428496-34428757:-|nuORF	REV__ENST00000562945.2_1_16:34428496-34428757:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.55328369140625	3	476.974502	1427.90168	0.69571	0.00033184	-4.4377	-0.0021167	-3.742	-0.0017849	477.30657889591464	20.149	0.22424	20.128	20.068	20.292	-0.020922					17	10	2	0	0	0	0.18191	1	462	462		10.104	0	1	79551	+		23195	28809	15691	15701	26652	26652					0.2048421600115944
KRISRPAAQ	9	Unmodified	_KRISRPAAQ_					0	0	0			REV__ENST00000382363.7_1_22:30775266-30775527:-|nuORF	REV__ENST00000382363.7_1_22:30775266-30775527:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8086547851562	2	513.811982	1025.60941	-1.4174	-0.00072826	-4.4658	-0.0022946	-5.8832	-0.0030229	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.7932	1	3917	3917		20.947	0.95016	1	1977600	+		23196	25979	15692	15702	26653	26653					0.09763076039871521
KRISTLTIE	9	Unmodified	_KRISTLTIE_					0	0	0		ENSG00000117751|ENST00000311772|PPP1R8;nc|ENSG00000117751|Q12972-2|PPP1R8	ENSG00000117751|ENST00000311772|PPP1R8	ENSG00000117751|ENST00000311772|PPP1R8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.8206787109375	2	530.821681	1059.62881	1.1117	0.00059012	-2.5221	-0.0013388	-1.4104	-0.00074865	530.8202358745281	82.61	1.5277	82.544	82.018	83.546	-0.066185					83	35	4	0	0	0	0.7932	1	8362	8362		23.042	1.0826	1	1339600			23197	3001	15693	15703	26654	26654					0.10137987540133508
KRITLVLQQP	10	Unmodified	_KRITLVLQQP_					0	0	0		nc|ENSG00000100888|Q9HCK8-2|CHD8;ENSG00000100888|ENST00000646647|CHD8	nc|ENSG00000100888|Q9HCK8-2|CHD8	nc|ENSG00000100888|Q9HCK8-2|CHD8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3827514648438	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.8505	1	2721	2721		19.104	0	1	352020			23198	1879	15694	15704	26655	26655					0.15525931110823876
KRITNAPN	8	Unmodified	_KRITNAPN_					0	0	0			REV__ENSG00000118985|ENST00000237853|ELL2	REV__ENSG00000118985|ENST00000237853|ELL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.26275634765625	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.88601	1	8588	8588		34.173	3.6689	1	4814400	+		23199	18335	15695	15705	26656	26656					0.054357228488470355
KRITNAPN	8	Unmodified	_KRITNAPN_					0	0	0			REV__ENSG00000118985|ENST00000237853|ELL2	REV__ENSG00000118985|ENST00000237853|ELL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.26324462890625	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.88601	1	7472	7472		34.173	5.023	1	1262800	+		23200	18335	15695	15705	26657	26657					0.054357228488470355
KRITSKEKG	9	Unmodified	_KRITSKEKG_					0	0	0		ENST00000306467.9_1_5:122714114-122717850:-|nuORF	ENST00000306467.9_1_5:122714114-122717850:-|nuORF	ENST00000306467.9_1_5:122714114-122717850:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.820068359375	2	523.819473	1045.62439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.69	1	101.96	101.46	102.46	0.26322								0	0	0	0.29475	1	12329	12329		32.812	3.6424	1				23201	9862	15696	15706	26658	26658					0.1034052311722462
KRIYKGMV	8	Unmodified	_KRIYKGMV_					0	0	0		nc|ENSG00000150275|Q96QU1-6|PCDH15;ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000150275|Q96QU1-3|PCDH15;nc|ENSG00000150275|Q96QU1-4|PCDH15;nc|ENSG00000150275|Q96QU1|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.7957763671875	2	497.796955	993.579357	0.33469	0.00016661	-2.3464	-0.0011681	-2.0118	-0.0010014	497.79551634358694	49.085	0.97178	49.123	48.706	49.678	0.037735					52	22	3	0	0	0	0.81548	1	3776	3776		20.482	3.1169	1	383630			23202	5061	15697	15707	26659	26659					0.0823100105035337
KRKCQTKRKKL	11	Unmodified	_KRKCQTKRKKL_					0	0	0		ENST00000395425.6_1_14:55647481-55649137:-|nuORF	ENST00000395425.6_1_14:55647481-55649137:-|nuORF	ENST00000395425.6_1_14:55647481-55649137:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.97064208984375	3	472.969645	1415.88711	-0.70225	-0.00033214	3.4315	0.001623	2.7292	0.0012909	472.9712636412795	49.393	3.7524	49.369	48.706	52.459	-0.024033					207	93	4	0	0	0	0.81021	1	4212	4212		9.2118	0	1	1446100			23203	11093	15698	15708	26660	26660					0.19579820581361673
KRKEKRSERKN	11	Unmodified	_KRKEKRSERKN_					0	0	0			REV__nc|ENSG00000118058|Q03164-2|KMT2A	REV__nc|ENSG00000118058|Q03164-2|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.959716796875	3	486.958574	1457.85389	0.79001	0.0003847	0.19252	9.3751E-05	0.98253	0.00047845	486.9584649603582	102.7	1.5035	102.83	102.01	103.52	0.12622					71	37	3	0	0	0	0.79476	1	10843	10843		12.433	0.79691	1	400810	+		23204	18291	15699	15709	26661	26661					0.1432791006302523
KRKEKRSERKN	11	Unmodified	_KRKEKRSERKN_					0	0	0			REV__nc|ENSG00000118058|Q03164-2|KMT2A	REV__nc|ENSG00000118058|Q03164-2|KMT2A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.9606018066406	3	486.958574	1457.85389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.63	1	102.85	102.35	103.35	0.22556								0	0	0	0.56276	1	12463	12463		25.068	7.2346	1		+		23205	18291	15699	15709	26662	26662					0.1432791006302523
KRKELKKVPN	10	Unmodified	_KRKELKKVPN_					0	0	0		nc|ENSG00000128606|Q8N6Y2-2|LRRC17;ENSG00000128606|ENST00000339431|LRRC17	nc|ENSG00000128606|Q8N6Y2-2|LRRC17	nc|ENSG00000128606|Q8N6Y2-2|LRRC17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.9324951171875	3	413.934706	1238.78229	-1.0065	-0.00041663	-3.7709	-0.0015609	-4.7774	-0.0019775	413.93306098265026	44.954	2.5911	44.923	43.876	46.467	-0.031067					192	60	4	0	0	0	0.86742	1	3571	3571		27.644	4.266	1	748080			23206	3552	15700	15710	26663	26663					0.1724502237645993
KRKELLSIVSK	11	Unmodified	_KRKELLSIVSK_					0	0	0			REV__ENST00000596094.5_1_19:56884582-56885033:+|nuORF	REV__ENST00000596094.5_1_19:56884582-56885033:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.2857666015625	3	434.281883	1299.82382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.095	1	54.09	53.59	54.59	-0.0053711								0	0	0	0.56276	1	4762	4762		20.315	4.3082	1		+		23207	27166	15701	15711	26664	26664					0.18590158345114105
KRKEPAAGG	9	Unmodified	_KRKEPAAGG_					0	0	0			REV__ENST00000397714.6_1_2:110343365-110371441:-|nuORF	REV__ENST00000397714.6_1_2:110343365-110371441:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.26300048828125	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.67345	1	8056	8056		42.396	6.7778	1	4814400	+		23208	26176	15702	15712	26665	26665					0.05435722848858404
KRKEPAAGG	9	Unmodified	_KRKEPAAGG_					0	0	0			REV__ENST00000397714.6_1_2:110343365-110371441:-|nuORF	REV__ENST00000397714.6_1_2:110343365-110371441:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2637023925781	2	457.264333	912.514114	-0.73369	-0.00033549	0.73239	0.0003349	-0.0013027	-5.9568E-07	457.26455633568185	79.517	3.0273	79.933	78.153	81.18	0.41621					150	71	3	0	0	0	0.67345	1	9075	9075		42.396	1.8235	1	894880	+		23209	26176	15702	15712	26666	26666					0.05435722848858404
KRKEPAAGG	9	Unmodified	_KRKEPAAGG_					0	0	0			REV__ENST00000397714.6_1_2:110343365-110371441:-|nuORF	REV__ENST00000397714.6_1_2:110343365-110371441:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2623291015625	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.78058	1	9233	9233		30.504	1.3541	1	3505500	+		23210	26176	15702	15712	26667	26667					0.05435722848858404
KRKEPAAGG	9	Unmodified	_KRKEPAAGG_					0	0	0			REV__ENST00000397714.6_1_2:110343365-110371441:-|nuORF	REV__ENST00000397714.6_1_2:110343365-110371441:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2629089355469	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.74721	1	9793	9793		37.159	0	1	4402400	+		23211	26176	15702	15712	26668	26668					0.05435722848858404
KRKERKRIYR	10	Unmodified	_KRKERKRIYR_					0	0	0			REV__ENST00000604081.1_1_12:54388028-54388532:-|nuORF	REV__ENST00000604081.1_1_12:54388028-54388532:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.63720703125	3	478.303904	1431.88988	-0.10097	-4.8294E-05	-2.0098	-0.00096131	-2.1108	-0.0010096	478.302730378592	67.138	1.0775	67.155	66.828	67.905	0.016205					111	46	4	0	0	0	0.86151	2	6293	6287;6293		15.333	5.2292	1	279890	+		23212	29352	15703	15713	26669;26670	26670					0.19121412030563079
KRKERKRIYR	10	Unmodified	_KRKERKRIYR_					0	0	0			REV__ENST00000604081.1_1_12:54388028-54388532:-|nuORF	REV__ENST00000604081.1_1_12:54388028-54388532:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.6379089355469	3	478.303904	1431.88988	-1.7989	-0.00086042	-0.21	-0.00010045	-2.0089	-0.00096087	478.3036786471485	67.172	1.202	67.201	66.753	67.955	0.02858					107	52	3	0	0	0	0.87637	1	6352	6352		12.957	3.7457	1	286540	+		23213	29352	15703	15713	26671	26671					0.19121412030563079
KRKFATKSKN	10	Unmodified	_KRKFATKSKN_					0	0	0		chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A;chr19:17618962-17624829|52|21.02|0.18|6.91|-|ENST00000552293|UNC13A,UNC13A;ENSG00000130477|ENST00000519716|UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3695678710938	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.53	1	117.55	117.05	118.05	0.026466								0	0	0	0.45132	1	12918	12918		14.137	3.2716	1				23214	266	15704	15714	26672	26672					0.12459876308275852
KRKFIPPA	8	Unmodified	_KRKFIPPA_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-7|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8060302734375	2	478.805637	955.596721	-1.2024	-0.0005757	2.6266	0.0012576	1.4242	0.00068191	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.81724	1	2841	2841		14.664	0.88877	1	361300			23215	4314	15705	15715	26673	26673					0.11714664647649897
KRKGPHPLSAS	11	Unmodified	_KRKGPHPLSAS_					0	0	0		ENST00000581858.5_1_17:18148302-18148470:-|nuORF	ENST00000581858.5_1_17:18148302-18148470:-|nuORF	ENST00000581858.5_1_17:18148302-18148470:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3421630859375	2	589.343646	1176.67274	0.15554	9.1664E-05	-1.2615	-0.00074348	-1.106	-0.00065182	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.7434	1	11223	11223		23.523	0.94304	1	10540000			23216	14108	15706	15716	26674	26674					0.09147016757151505
KRKGTKAAS	9	Unmodified	_KRKGTKAAS_					0	0	0		ENST00000416928.6_1_2:177040956-177041091:-|nuORF	ENST00000416928.6_1_2:177040956-177041091:-|nuORF	ENST00000416928.6_1_2:177040956-177041091:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.7926330566406	2	473.793258	945.571963	-1.0572	-0.0005009	1.32	0.00062539	0.26274	0.00012448	473.793679724147	89.197	1.4239	89.197	88.751	90.174	0					63	32	3	0	0	0	0.7932	1	8620	8620		20.947	0	1	271460			23217	11405	15707	15717	26675	26675					0.09699984774272252
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3088684082031	3	478.975788	1433.90553	-1.6788	-0.00080411	-1.7492	-0.00083784	-3.428	-0.0016419	479.3090926937771	44.658	1.9564	44.658	43.823	45.779	0					118	47	4	0	0	0	0.81219	1	3282	3282		8.7993	0	1	394570	+		23218	28418	15708	15718	26676	26676					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.97369384765625	3	478.975788	1433.90553	0.1614	7.7307E-05	-2.9471	-0.0014116	-2.7857	-0.0013343	478.974258997061	46.621	1.762	46.607	45.625	47.387	-0.013821					99	45	3	0	0	0	0.81407	1	3680	3680		8.4073	2.4062	1	179760	+		23219	28418	15708	15718	26677	26677					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.97369384765625	3	478.975788	1433.90553	-0.022494	-1.0774E-05	-2.4548	-0.0011758	-2.4773	-0.0011866	478.9744999510038	52.877	2.746	52.874	51.525	54.271	-0.0033035					162	72	3	0	0	0	0.79224	1	4614	4614		12.957	4.1582	1	150480	+		23220	28418	15708	15718	26678	26678					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9747314453125	3	478.975788	1433.90553	-0.79395	-0.00038028	-1.9266	-0.0009228	-2.7206	-0.0013031	478.9747699681175	46.852	2.0236	46.823	45.583	47.607	-0.028782					130	52	3	0	0	0	0.79716	1	3757	3757		11.932	3.1331	1	237090	+		23221	28418	15708	15718	26679	26679					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9759216308594	3	478.975788	1433.90553	-0.66296	-0.00031754	-1.6042	-0.00076835	-2.2671	-0.0010859	478.9749259001235	50.906	1.1817	50.882	50.384	51.566	-0.02343					53	34	2	0	0	0	0.79716	1	4476	4476		11.932	2.2862	1	143310	+		23222	28418	15708	15718	26680	26680					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9756774902344	3	478.975788	1433.90553	-0.13683	-6.554E-05	-1.9753	-0.00094612	-2.1121	-0.0010117	478.974750908379	57.254	1.3987	57.225	56.666	58.065	-0.02866					58	41	2	0	0	0	0.80813	1	5324	5324		9.6461	0	1	137920	+		23223	28418	15708	15718	26681	26681					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9747619628906	3	478.975788	1433.90553	-1.7119	-0.00081998	-1.7982	-0.00086131	-3.5102	-0.0016813	479.3091273555825	44.793	1.4619	44.789	44.201	45.663	-0.0041618					103	33	5	0	0	0	0.79716	1	3568	3568		11.932	1.7878	1	653120	+		23224	28418	15708	15718	26682	26682					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9729309082031	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.407	1	57.441	56.941	57.941	0.033905								0	0	0	0.56276	1	5222	5222		17.833	8.187	1		+		23225	28418	15708	15718	26683	26683					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3080749511719	3	478.975788	1433.90553	-0.90815	-0.00043498	-1.7541	-0.00084019	-2.6623	-0.0012752	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.80813	1	3293	3293		9.6461	0	1	368580	+		23226	28418	15708	15718	26684	26684					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9752197265625	3	478.975788	1433.90553	-0.90277	-0.0004324	-1.6609	-0.00079555	-2.5637	-0.001228	478.97487033218596	49.369	1.842	49.394	48.497	50.339	0.025578					115	47	3	0	0	0	0.79224	1	3781	3781		12.957	0	1	238510	+		23227	28418	15708	15718	26685	26685					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9738464355469	3	478.975788	1433.90553	-0.88979	-0.00042619	-1.3561	-0.00064952	-2.2459	-0.0010757	478.97502977834864	56.875	1.1479	56.946	56.618	57.766	0.071835					88	55	2	0	0	0	0.79476	2	4842	4838;4842		12.433	1.846	1	207280	+		23228	28418	15708	15718	26686;26687	26687					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9750061035156	3	478.975788	1433.90553	0.32204	0.00015425	-2.7165	-0.0013011	-2.3944	-0.0011469	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.76579	1	4076	4076		18.531	1.3643	1	307830	+		23229	28418	15708	15718	26688	26688					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9750061035156	3	478.975788	1433.90553	0.34157	0.0001636	-2.911	-0.0013943	-2.5694	-0.0012307	478.9743151753571	51.804	1.1678	51.863	51.373	52.541	0.059719					70	37	2	0	0	0	0.75121	1	4116	4116		21.78	7.0016	1	347520	+		23230	28418	15708	15718	26689	26689					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3014221191406	3	478.975788	1433.90553	0.35245	0.00016881	-3.2435	-0.0015536	-2.8911	-0.0013847	478.9741095971511	52.816	1.6716	52.886	52.36	54.032	0.070713					123	47	3	0	0	0	0.79476	1	4400	4400		12.433	0.50046	1	295530	+		23231	28418	15708	15718	26690	26690					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9764099121094	3	478.975788	1433.90553	0.36809	0.00017631	-2.7907	-0.0013367	-2.4226	-0.0011604	478.9743048162478	54.877	1.9768	54.968	54.012	55.989	0.091167					129	57	3	0	0	0	0.77511	1	4587	4587		16.53	6.8837	1	277080	+		23232	28418	15708	15718	26691	26691					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30889892578125	3	478.975788	1433.90553	-0.3619	-0.00017334	-1.9452	-0.00093169	-2.3071	-0.001105	478.9747142061381	50.735	1.3969	50.643	50.107	51.504	-0.091797					89	39	3	0	0	0	0.77205	2	3968	3968;3977		17.167	4.7339	1	284170	+		23233	28418	15708	15718	26692;26693	26692					0.2059369854760007
KRKHRLIQRLS	11	Unmodified	_KRKHRLIQRLS_					0	0	0			REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	REV__ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3070373535156	3	478.975788	1433.90553	-0.41434	-0.00019846	-1.9974	-0.00095669	-2.4117	-0.0011551	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.75121	2	4375	4169;4375		21.78	4.7086	1	341610	+		23234	28418	15708	15718	26694;26695	26695					0.2059369854760007
KRKIKEPLLLP	11	Unmodified	_KRKIKEPLLLP_					0	0	0		ENST00000567674.1_1_16:68721613-68732300:+|nuORF;nc|ENSG00000062038|P22223-2|CDH3;ENST00000542274.5_1_16:68679206-68732300:+|nuORF;ENSG00000062038|ENST00000264012|CDH3	ENST00000567674.1_1_16:68721613-68732300:+|nuORF	ENST00000567674.1_1_16:68721613-68732300:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	445.6358947753906	3	445.634257	1333.88094	0.062754	2.7965E-05	3.6991	0.0016484	3.7618	0.0016764	445.6357961249476	38.38	1.6651	38.352	37.86	39.525	-0.027843					167	38	6	0	0	0	0.84494	1	2605	2605		6.3209	2.7018	1	3758900			23235	1081	15709	15719	26696	26696					0.2273562562152165
KRKKAGGH	8	Unmodified	_KRKKAGGH_					0	0	0			REV__ENST00000447672.1_1_9:75356163-75356322:-|nuORF	REV__ENST00000447672.1_1_9:75356163-75356322:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9395751953125	2	441.275035	880.535518	0.33768	0.00014901	-4.4784	-0.0019762	-4.1407	-0.0018272	441.2729001679441	55.903	0.64999	56.002	55.65	56.3	0.099186					41	26	2	0	0	0	0.4196	1	4735	4735		4.6817	3.2169	1	166200	+		23236	26825	15710	15720	26697	26697					0.09047152668233593
KRKKAGGH	8	Unmodified	_KRKKAGGH_					0	0	0			REV__ENST00000447672.1_1_9:75356163-75356322:-|nuORF	REV__ENST00000447672.1_1_9:75356163-75356322:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9397277832031	2	441.275035	880.535518	-0.66361	-0.00029284	-3.5095	-0.0015486	-4.1731	-0.0018415	441.2733132388045	55.916	0.57415	55.879	55.56	56.135	-0.036827					35	22	2	0	0	0	0.4196	1	4668	4668		13.775	6.085	1	156110	+		23237	26825	15710	15720	26698	26698					0.09047152668233593
KRKKAGGH	8	Unmodified	_KRKKAGGH_					0	0	0			REV__ENST00000447672.1_1_9:75356163-75356322:-|nuORF	REV__ENST00000447672.1_1_9:75356163-75356322:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.2728271484375	2	441.275035	880.535518	-0.33925	-0.0001497	-3.9746	-0.0017539	-4.3139	-0.0019036	441.27318175499244	53.147	0.99224	53.561	53.044	54.036	0.4139					41	23	2	0	0	0	0.85787	1	5370	5370		9.4706	1.2393	1	1087400	+		23238	26825	15710	15720	26699	26699					0.09047152668233593
KRKKAGGH	8	Unmodified	_KRKKAGGH_					0	0	0			REV__ENST00000447672.1_1_9:75356163-75356322:-|nuORF	REV__ENST00000447672.1_1_9:75356163-75356322:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.27227783203125	2	441.275035	880.535518	0.022734	1.0032E-05	-4.2612	-0.0018803	-4.2384	-0.0018703	441.27304767072025	52.937	0.86954	53.551	53.075	53.944	0.61436					37	20	2	0	0	0	0.85787	1	5335	5335		9.4706	0.64823	1	1126100	+		23239	26825	15710	15720	26700	26700					0.09047152668233593
KRKKEDIKKK	10	Unmodified	_KRKKEDIKKK_					0	0	0			REV__ENSG00000076043|ENST00000265881|REXO2	REV__ENSG00000076043|ENST00000265881|REXO2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.2869873046875	3	434.285628	1299.83505	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.661	1	57.631	57.131	58.131	-0.029865								0	0	0	0.45132	1	5328	5328		15.333	0.63944	1		+		23240	16721	15711	15721	26701	26701					0.19712980439248895
KRKKEQPKSSQ	11	Unmodified	_KRKKEQPKSSQ_					0	0	0		ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.5965881347656	3	448.596642	1342.7681	1.0026	0.00044974	-1.2542	-0.00056262	-0.25162	-0.00011287	448.5960230906909	33.014	0.92749	33.225	32.851	33.778	0.21168					63	21	4	0	0	0	0.44695	1	2377	2377		55.721	2.1242	1	1860300			23241	5124	15712	15722	26702	26702					0.11042325157518462
KRKKKDFFLLL	11	Unmodified	_KRKKKDFFLLL_					0	0	0		ENST00000244745.3_2_6:21597148-21597334:+|nuORF	ENST00000244745.3_2_6:21597148-21597334:+|nuORF	ENST00000244745.3_2_6:21597148-21597334:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3086242675781	3	479.309773	1434.90749	0.28128	0.00013482	-3.471	-0.0016637	-3.1897	-0.0015289	479.3079813908047	43.232	1.6002	43.205	42.248	43.848	-0.026764					59	38	2	0	0	0	0.79224	1	3291	3291		12.957	2.3707	1	284320			23242	9264	15713	15723	26703	26703					0.2074331451285616
KRKKKRKKRRR	11	Unmodified	_KRKKKRKKRRR_					0	0	0			REV__ENST00000216190.12_1_22:36906978-36907630:-|nuORF	REV__ENST00000216190.12_1_22:36906978-36907630:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3713989257812	3	523.369242	1567.0859	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.219	1	36.25	35.75	36.75	0.031132								0	0	0	0.56276	1	1976	1976		5.6988	0.28586	1		+		23243	24126	15714	15724	26704	26704					0.32503841995071525
KRKKSLGKIDK	11	Unmodified	_KRKKSLGKIDK_					0	0	0			REV__ENST00000481407.5_1_7:92191598-92207100:-|nuORF	REV__ENST00000481407.5_1_7:92191598-92207100:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.2853088378906	3	434.285628	1299.83505	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.749	1	57.749	57.249	58.249	0								0	0	0	0.56276	1	4979	4979		15.337	1.2515	1		+		23244	27438	15715	15725	26705	26705					0.19712980439271632
KRKKSVYL	8	Unmodified	_KRKKSVYL_					0	0	0		ENST00000535831.5_1_12:123319323-123319551:+|nuORF	ENST00000535831.5_1_12:123319323-123319551:+|nuORF	ENST00000535831.5_1_12:123319323-123319551:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.3274230957031	2	511.329476	1020.6444	-0.73647	-0.00037658	-3.6891	-0.0018863	-4.4256	-0.0022629	511.3274858429374	97.597	1.7759	97.597	97.074	98.849	0					91	42	3	0	0	0	0.80706	1	9830	9830		19.36	0	1	585290			23245	13428	15716	15726	26706	26706					0.13490318847846083
KRKKTVSGG	9	Unmodified	_KRKKTVSGG_					0	0	0			REV__ENST00000368298.2_1_1:156104977-156106341:+|nuORF	REV__ENST00000368298.2_1_1:156104977-156106341:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.8011169433594	2	480.801083	959.587613	2.0445	0.00098299	-2.6609	-0.0012794	-0.61641	-0.00029637	480.7997098356697	95.287	4.3541	95.23	94.639	98.993	-0.057526					326	101	5	0	0	0	0.78058	1	10296	10296		30.504	6.3009	1	19210000	+		23246	20740	15717	15727	26707	26707					0.10620271291350036
KRKLKLGG	8	Unmodified	_KRKLKLGG_					0	0	0		ENSG00000187527|ENST00000342358|ATP13A5	ENSG00000187527|ENST00000342358|ATP13A5	ENSG00000187527|ENST00000342358|ATP13A5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2742614746094	2	450.311087	898.60762	-1.7761	-0.00079982	-1.7039	-0.00076727	-3.48	-0.0015671	450.31022918061257	92.895	0.32967	93.088	92.777	93.107	0.19239					11	7	2	0	0	0	0.4196	1	9357	9357		13.775	9.4591	1	84153			23247	7857	15718	15728	26708	26708					0.1542606702195144
KRKLLICTRRL	11	Unmodified	_KRKLLICTRRL_					0	0	0			REV__ENST00000373222.3_1_20:40162013-40162172:-|nuORF	REV__ENST00000373222.3_1_20:40162013-40162172:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.23272705078125	3	467.306257	1398.89694	-0.44259	-0.00020683	3.9738	0.001857	3.5312	0.0016502	467.64262062673765	66.791	0.1107	67.341	67.281	67.391	0.55071					5	4	2	0	0	0	0.17835	1	7327	7327		21.78	0.74819	1	101770	+		23248	25755	15719	15729	26709	26709					0.2134500858676347
KRKLNINLV	9	Unmodified	_KRKLNINLV_					0	0	0			REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	REV__ENST00000485134.1_1_1:158911778-158914889:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3601684570312	2	549.361308	1096.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.732	1	44.781	44.281	45.281	0.048996								0	0	0	0.30053	1	3175	3175		30.504	1.3541	1		+		23249	20936	15720	15730	26710	26710					0.16357679284919868
KRKLPLRL	8	Unmodified	_KRKLPLRL_					0	0	0			REV__ENST00000521663.1_1_8:58193267-58194656:+|nuORF	REV__ENST00000521663.1_1_8:58193267-58194656:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.361328125	2	512.361111	1022.70767	-0.052808	-2.7057E-05	0.34006	0.00017423	0.28725	0.00014718	512.3611914628581	74.266	1.3455	74.309	74.086	75.431	0.0429					113	47	3	0	0	0	0.86294	1	7150	7150		8.8223	1.132	1	281850	+		23250	28123	15721	15731	26711	26711					0.1972230435574147
KRKLQERPWL	10	Unmodified	_KRKLQERPWL_					0	0	0		ENSG00000157881|ENST00000378466|PANK4;ENST00000471361.1_1_1:2441894-2444451:-|nuORF	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9434509277344	3	451.941973	1352.80409	-1.6861	-0.00076203	4.482	0.0020256	2.7959	0.0012636	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.85441	2	4473	4457;4473		21.686	1.5745	1	792670			23251	5452	15722	15732	26712;26713	26713					0.14179827125030897
KRKLQLGLQFL	11	Unmodified	_KRKLQLGLQFL_					0	0	0		nc|ENSG00000196739|Q8IZC6-3|COL27A1;ENSG00000196739|ENST00000356083|COL27A1	nc|ENSG00000196739|Q8IZC6-3|COL27A1	nc|ENSG00000196739|Q8IZC6-3|COL27A1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.6219787597656	3	448.62224	1342.84489	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.104	1	65.23	64.73	65.73	0.12545								0	0	0	0.56276	1	5762	5762		22.562	8.3183	1				23252	8098	15723	15733	26714	26714					0.18718168444661387
KRKLRLSKNHR	11	Unmodified	_KRKLRLSKNHR_					0	0	0		nc|ENSG00000104964|Q08117-2|TLE5	nc|ENSG00000104964|Q08117-2|TLE5	nc|ENSG00000104964|Q08117-2|TLE5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3091125488281	3	479.307537	1434.90078	0.28128	0.00013482	1.1941	0.00057234	1.4754	0.00070716	479.3079813908047	43.232	1.6002	43.205	42.248	43.848	-0.026764					59	38	2	0	0	0	0.79476	1	3280	3280		12.433	0.50046	1	284320			23253	14828	15724	15734	26715	26715					0.20072814404829842
KRKLVRRHSM	10	Unmodified	_KRKLVRRHSM_					0	0	0		ENSG00000272031|ENST00000606888|ANKRD34A	ENSG00000272031|ENST00000606888|ANKRD34A	ENSG00000272031|ENST00000606888|ANKRD34A	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.6033630371094	3	437.603185	1309.78773	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.9	1	54.874	54.374	55.374	-0.025955								0	0	0	0.45132	1	4974	4974		26.063	0.9374	1				23254	8982	15725	15735	26716	26716					0.145224226873097
KRKLVTHIVPK	11	Unmodified	_KRKLVTHIVPK_					0	0	0			REV__nc|ENSG00000179397|Q5SY80-2|CATSPERE	REV__nc|ENSG00000179397|Q5SY80-2|CATSPERE	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.2922058105469	3	440.294235	1317.86087	-1.6142	-0.00071074	-2.0665	-0.00090985	-3.6807	-0.0016206	440.2929975930263	58.275	1.2356	58.275	57.838	59.074	0					156	53	4	0	0	0	0.77205	1	5043	5043		17.167	3.6588	1	193800	+		23255	22335	15726	15736	26717	26717					0.21465874681553032
KRKMEFQRK	9	Unmodified	_KRKMEFQRK_					0	0	0			REV__ENSG00000184203|ENST00000618156|PPP1R2	REV__ENSG00000184203|ENST00000618156|PPP1R2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.5755310058594	3	417.576525	1249.70774	1.3349	0.00055741	-3.7322	-0.0015585	-2.3974	-0.0010011	417.5749239051732	21.566	1.4264	21.123	20.825	22.251	-0.44324					86	32	4	0	0	0	0.23176	2	778	778;789		70.816	2.9373	1	1107100	+		23256	22652	15727	15737	26718;26719	26718					0.0928793629343545
KRKMEFQRK	9	Unmodified	_KRKMEFQRK_					0	0	0			REV__ENSG00000184203|ENST00000618156|PPP1R2	REV__ENSG00000184203|ENST00000618156|PPP1R2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.5754699707031	3	417.576525	1249.70774	0.01401	5.8505E-06	-2.5142	-0.0010499	-2.5002	-0.001044	417.57545004424423	21.793	0.92327	21.165	20.804	21.727	-0.62835					70	23	4	0	0	0	0.23176	4	817	801;817;829;842		70.816	9.8973	1	1387700	+		23257	22652	15727	15737	26720;26721;26722;26723	26721					0.0928793629343545
KRKNRHEKTA	10	Unmodified	_KRKNRHEKTA_					0	0	0		ENST00000389467.3_16:18871006-18872062:-|nuORF	ENST00000389467.3_16:18871006-18872062:-|nuORF	ENST00000389467.3_16:18871006-18872062:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3768920898438	2	634.370727	1266.7269	6.6614	0.0042258	3.2315	0.0020499	9.8928	0.0062757	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.86471	3	13328	13328;13434;13467		30.318	7.2752	1	7041100			23258	10990	15728	15738	26724;26725;26726	26724					0.10420608908702889
KRKNRHEKTA	10	Unmodified	_KRKNRHEKTA_					0	0	0		ENST00000389467.3_16:18871006-18872062:-|nuORF	ENST00000389467.3_16:18871006-18872062:-|nuORF	ENST00000389467.3_16:18871006-18872062:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3782348632812	2	634.370727	1266.7269	6.8435	0.0043413	3.4115	0.0021641	10.255	0.0065054	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.8486	1	13769	13769		18.262	0.79408	1	75725			23259	10990	15728	15738	26727	26727					0.10420608908702889
KRKNRHEKTA	10	Unmodified	_KRKNRHEKTA_					0	0	0		ENST00000389467.3_16:18871006-18872062:-|nuORF	ENST00000389467.3_16:18871006-18872062:-|nuORF	ENST00000389467.3_16:18871006-18872062:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3789672851562	2	634.370727	1266.7269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.9	1	115.86	115.36	116.36	-0.037872								0	0	0	0.45132	1	13924	13924		29.17	10.067	1				23260	10990	15728	15738	26728	26728					0.10420608908702889
KRKNSLSAEK	10	Unmodified	_KRKNSLSAEK_					0	0	0			REV__ENST00000458516.5_1_6:30296744-30297088:+|nuORF	REV__ENST00000458516.5_1_6:30296744-30297088:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.8402709960938	2	580.840936	1159.66732	-0.90693	-0.00052678	0.19514	0.00011335	-0.71179	-0.00041344	580.8407767096548	69.755	0.8518	69.79	69.548	70.399	0.035622					124	41	4	0	0	0	0.86348	1	6690	6690		31.53	3.6476	1	14836000	+		23261	26985	15729	15739	26729	26729					0.0938729317463185
KRKPASLMAPL	11	Unmodified	_KRKPASLMAPL_					0	0	0		nc|ENSG00000168763|Q8NE01-3|CNNM3;ENST00000465224.5_1_2:97490916-97493694:+|nuORF;nc|ENSG00000168763|Q8NE01-2|CNNM3;ENSG00000168763|ENST00000305510|CNNM3	nc|ENSG00000168763|Q8NE01-3|CNNM3	nc|ENSG00000168763|Q8NE01-3|CNNM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	606.3689575195312	2	606.368275	1210.722	1.0648	0.00064567	0.92935	0.00056353	1.9942	0.0012092	606.3686977940384	94.008	3.2437	94.236	93.32	96.564	0.22863					196	77	3	0	0	0	0.67778	1	9589	9589		35.152	3.1972	1	863300			23262	15082	15730	15740	26730	26730					0.12506588721726075
KRKPASLMAPL	11	Unmodified	_KRKPASLMAPL_					0	0	0		nc|ENSG00000168763|Q8NE01-3|CNNM3;ENST00000465224.5_1_2:97490916-97493694:+|nuORF;nc|ENSG00000168763|Q8NE01-2|CNNM3;ENSG00000168763|ENST00000305510|CNNM3	nc|ENSG00000168763|Q8NE01-3|CNNM3	nc|ENSG00000168763|Q8NE01-3|CNNM3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	606.368275	1210.722	1.8397	0.0011156	0.13578	8.2332E-05	1.9755	0.0011979	606.3682132873314	93.989	3.1891	94.43	93.437	96.626	0.44099	0.026527	-0.0018052	NaN	35.152	131	80	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	715310			23263	15082	15730	15740							0.12506588721726075
KRKPASLMAPL	11	Unmodified	_KRKPASLMAPL_					0	0	0		nc|ENSG00000168763|Q8NE01-3|CNNM3;ENST00000465224.5_1_2:97490916-97493694:+|nuORF;nc|ENSG00000168763|Q8NE01-2|CNNM3;ENSG00000168763|ENST00000305510|CNNM3	nc|ENSG00000168763|Q8NE01-3|CNNM3	nc|ENSG00000168763|Q8NE01-3|CNNM3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	606.368275	1210.722	0.18254	0.00011069	1.8512	0.0011225	2.0338	0.0012332	606.3692831678103	94.219	3.4389	94.655	93.426	96.865	0.43539	0.25133	0.00027518	NaN	35.152	181	85	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	742010			23264	15082	15730	15740							0.12506588721726075
KRKPPFGT	8	Unmodified	_KRKPPFGT_					0	0	0			REV__nc|ENSG00000143776|Q5VT25-3|CDC42BPA	REV__nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7775573730469	2	465.779619	929.544686	-1.5315	-0.00071332	-2.8632	-0.0013336	-4.3947	-0.0020469	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.89962	1	7859	7859		38.806	10.552	1	991370	+		23265	19840	15731	15741	26731	26731					0.07709501233898663
KRKPPFGT	8	Unmodified	_KRKPPFGT_					0	0	0			REV__nc|ENSG00000143776|Q5VT25-3|CDC42BPA	REV__nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7772521972656	2	465.779619	929.544686	-0.30744	-0.0001432	-3.8739	-0.0018044	-4.1814	-0.0019476	465.7776434703856	79.401	2.1188	79.95	79.065	81.184	0.54945					96	49	3	0	0	0	0.87479	1	9182	9182		30.504	1.3541	1	297690	+		23266	19840	15731	15741	26732	26732					0.07709501233898663
KRKQNLHFE	9	Unmodified	_KRKQNLHFE_					0	0	0		ENST00000552666.1_1_14:36235117-36235897:+|nuORF	ENST00000552666.1_1_14:36235117-36235897:+|nuORF	ENST00000552666.1_1_14:36235117-36235897:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	600.3336181640625	2	600.335821	1198.65709	-0.5349	-0.00032112	-2.6296	-0.0015786	-3.1645	-0.0018998	600.3340485202916	94.432	2.5436	94.5	93.254	95.798	0.068336					116	60	2	0	0	0	0.78536	1	9877	9877		29.15	2.4566	1	428900			23267	13685	15732	15742	26733	26733					0.06570730240082412
KRKRHWRPYLE	11	Unmodified	_KRKRHWRPYLE_					0	0	0		ENSG00000168517|ENST00000589230|HEXIM2	ENSG00000168517|ENST00000589230|HEXIM2	ENSG00000168517|ENST00000589230|HEXIM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.63427734375	3	523.635542	1567.8848	-0.4869	-0.00025496	-1.2387	-0.00064862	-1.7256	-0.00090358	523.6348544015394	45.351	1.4658	45.32	44.929	46.395	-0.031067					110	33	5	0	0	0	0.76579	2	3726	3676;3726		18.531	5.5736	1	2727200			23268	6408	15733	15743	26734;26735	26735					0.12357108167952902
KRKRPRKKSPR	11	Unmodified	_KRKRPRKKSPR_					0	0	0		nc|ENSG00000160208|Q14684-2|RRP1B;ENSG00000160208|ENST00000340648|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.9857482910156	3	479.651415	1435.93242	0.061457	2.9478E-05	-0.052485	-2.5174E-05	0.0089724	4.3036E-06	479.6512854860162	15.573	0.15247	15.631	15.548	15.7	0.057872					5	3	2	0	0	0	0.67762	2	46	46;50		35.178	3.9473	1	105070			23269	5565	15734	15744	26736;26737	26736					0.23188807158771851
KRKRRKKKGH	10	Unmodified	_KRKRRKKKGH_					0	0	0		nc|ENSG00000185404|Q9H930-1|SP140L;nc|ENSG00000185404|Q9H930-2|SP140L;ENSG00000185404|ENST00000415673|SP140L	nc|ENSG00000185404|Q9H930-1|SP140L	nc|ENSG00000185404|Q9H930-1|SP140L	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.8451232910156	3	441.296973	1320.86909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.82	1	115.82	115.32	116.32	0								0	0	0	0.45132	1	11896	11896		11.097	1.4506	1				23270	7710	15735	15745	26738	26738					0.22148866441534665
KRKRSFPTES	10	Unmodified	_KRKRSFPTES_					0	0	0			REV__FLAM_C_dup760|chr1:48196212-48196347:-|4.149182167503632|0.107020745204949|5.28|63.0|1|1|sense	REV__FLAM_C_dup760|chr1:48196212-48196347:-|4.149182167503632|0.107020745204949|5.28|63.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3462524414062	2	618.346386	1234.67822	-0.1645	-0.00010172	-0.48965	-0.00030278	-0.65415	-0.00040449	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.86471	1	9898	9898		30.318	0	1	511870	+		23271	29429	15736	15746	26739	26739					0.07026695548938733
KRKRVAAFRKN	11	Unmodified	_KRKRVAAFRKN_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000606570.1_1_20:17923732-17923837:-|nuORF;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.62353515625	3	458.624866	1372.85277	-1.1089	-0.00050858	-1.3569	-0.00062232	-2.4659	-0.0011309	458.62415132719974	106.78	1.1825	106.93	106.56	107.74	0.14843					87	28	5	0	0	0	0.72892	2	11458	11434;11458		26.75	3.0807	1	2607000			23272	1602;13197	15737	15747	26740;26741	26741					0.18125740484788366
KRKRVAAFRKN	11	Unmodified	_KRKRVAAFRKN_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000606570.1_1_20:17923732-17923837:-|nuORF;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.6238098144531	3	458.624866	1372.85277	0.76244	0.00034968	-3.0747	-0.0014101	-2.3123	-0.0010605	458.62336440411514	106.9	1.2829	106.99	106.6	107.88	0.091255					93	30	4	0	0	0	0.79224	1	11474	11474		12.957	2.3956	1	3364000			23273	1602;13197	15737	15747	26742	26742					0.18125740484788366
KRKRVAAFRKN	11	Unmodified	_KRKRVAAFRKN_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000606570.1_1_20:17923732-17923837:-|nuORF;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.62359619140625	3	458.624866	1372.85277	-1.7497	-0.00080247	-0.34746	-0.00015935	-2.0972	-0.00096183	458.62457377783767	106.96	1.2018	107.02	106.65	107.85	0.053757					84	28	4	0	0	0	0.77205	1	11387	11387		17.167	0.63689	1	1632700			23274	1602;13197	15737	15747	26743	26743					0.18125740484788366
KRKRVAAFRKN	11	Unmodified	_KRKRVAAFRKN_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000606570.1_1_20:17923732-17923837:-|nuORF;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	458.624866	1372.85277	-0.12813	-5.8766E-05	-1.8604	-0.00085323	-1.9885	-0.000912	458.62390153760015	107.41	0.86607	107.37	106.99	107.86	-0.034401	0.34395	0.0010935	NaN	26.75	36	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	904620			23275	1602;13197	15737	15747							0.18125740484788366
KRKRVAAFRKN	11	Unmodified	_KRKRVAAFRKN_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000606570.1_1_20:17923732-17923837:-|nuORF;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	458.624866	1372.85277	2.7719	0.0012713	-4.8565	-0.0022273	-2.0846	-0.00095606	458.62256851255205	107.29	0.88141	107.26	106.93	107.81	-0.034134	0.23151	-0.0030288	NaN	26.75	36	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	841170			23276	1602;13197	15737	15747							0.18125740484788366
KRKRVAAFRKN	11	Unmodified	_KRKRVAAFRKN_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000606570.1_1_20:17923732-17923837:-|nuORF;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	458.624866	1372.85277	0.82084	0.00037646	-2.9311	-0.0013443	-2.1102	-0.0009678	458.6234233108059	107.13	0.79716	107.16	106.85	107.65	0.035622	0.13572	-0.00037964	NaN	26.75	36	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	775980			23277	1602;13197	15737	15747							0.18125740484788366
KRKRVAAFRKN	11	Unmodified	_KRKRVAAFRKN_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000606570.1_1_20:17923732-17923837:-|nuORF;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	458.624866	1372.85277	1.3412	0.00061512	-3.3386	-0.0015312	-1.9974	-0.00091607	458.62340659258734	106.65	0.19235	106.78	106.69	106.88	0.12742	-0.25143	-0.00094039	NaN	26.75	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63358			23278	1602;13197	15737	15747							0.18125740484788366
KRKRVAAFRKN	11	Unmodified	_KRKRVAAFRKN_					0	0	0		ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000606570.1_1_20:17923732-17923837:-|nuORF;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5;ENST00000523019.1_1_8:30778611-30778848:+|nuORF	ENSG00000089006|ENST00000377759|SNX5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	458.624866	1372.85277	4.2418	0.0019454	-6.0272	-0.0027642	-1.7854	-0.00081883	458.62213352214235	106.56	0.33908	106.71	106.62	106.96	0.14929	-0.31608	-0.0046395	NaN	26.75	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46802			23279	1602;13197	15737	15747							0.18125740484788366
KRKRWFINRHF	11	Unmodified	_KRKRWFINRHF_					0	0	0			REV__ENST00000583028.1_1_17:62175367-62207458:-|nuORF	REV__ENST00000583028.1_1_17:62175367-62207458:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.3118896484375	3	529.975899	1586.90587	0.2077	0.00011008	3.0573	0.0016203	3.265	0.0017304	529.9775180342994	27.152	1.0147	26.976	26.658	27.673	-0.17559					66	22	5	0	0	0	0.84494	1	1536	1536		6.3209	0.31984	1	826980	+		23280	29063	15738	15748	26744	26744					0.13589118267441336
KRKSGKDF	8	Unmodified	_KRKSGKDF_					0	0	0		ENSG00000163344|ENST00000368467|PMVK	ENSG00000163344|ENST00000368467|PMVK	ENSG00000163344|ENST00000368467|PMVK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.2778625488281	2	483.279983	964.545414	-0.91485	-0.00044213	-1.131	-0.00054658	-2.0458	-0.00098871	483.27955288343264	95.596	2.0172	95.596	94.881	96.898	0					89	46	3	0	0	0	0.8347	1	9563	9563		23.042	1.0826	1	657390			23281	5783	15739	15749	26745	26745					0.06172295882947765
KRKSPKFFV	9	Unmodified	_KRKSPKFFV_					0	0	0			REV__ENST00000518114.1_1_2:190619886-190627438:-|nuORF	REV__ENST00000518114.1_1_2:190619886-190627438:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.8535766601562	2	568.850576	1135.6866	1.5207	0.00086506	2.9075	0.0016539	4.4282	0.002519	568.8521463691729	102.21	3.6255	102.25	101.63	105.26	0.04319					340	87	6	0	0	0	0.7932	1	10995	10995		24.203	2.2429	1	51352000	+		23282	18789	15740	15750	26746	26746					0.12418294256212903
KRKTMAKVN	9	Unmodified	_KRKTMAKVN_					0	0	0		ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	ENSG00000152779|ENST00000371790|SLC16A12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3264770507812	2	538.323868	1074.63318	1.8602	0.0010014	3.8329	0.0020633	5.693	0.0030647	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.76764	1	12182	12182		34.173	5.023	1	19391000			23283	5200	15741	15751	26747	26747					0.09885173482052778
KRKTPQQA	8	Unmodified	_KRKTPQQA_					0	0	0		ENST00000524270.5_1_12:6981776-6982483:-|nuORF	ENST00000524270.5_1_12:6981776-6982483:-|nuORF	ENST00000524270.5_1_12:6981776-6982483:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.78509521484375	2	478.785433	955.556313	1.6863	0.00080739	-2.1808	-0.0010441	-0.49447	-0.00023675	478.78443593268145	92.331	1.6378	92.266	91.688	93.326	-0.06414					85	38	3	0	0	0	0.89962	1	9794	9794		38.806	1.647	1	793300			23284	13214	15742	15752	26748	26748					0.0767569825721921
KRKTYLVLVAK	11	Unmodified	_KRKTYLVLVAK_					0	0	0			REV__ENST00000338983.7_1_2:174087194-174087245:+|nuORF	REV__ENST00000338983.7_1_2:174087194-174087245:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.2918701171875	3	440.29049	1317.84964	0.36311	0.00015988	3.9032	0.0017185	4.2663	0.0018784	440.2919928155031	58.022	1.2392	58.056	57.534	58.773	0.033905					105	37	4	0	0	0	0.79476	1	5335	5335		12.433	3.221	1	302530	+		23285	25227	15743	15753	26749	26749					0.20343052587372767
KRKVLQDLVP	10	Unmodified	_KRKVLQDLVP_					0	0	0		nc|ENSG00000243943|Q96ME7-2|ZNF512;ENSG00000243943|ENST00000355467|ZNF512;ENST00000505973.1_1_2:27821100-27852768:+|nuORF;nc|ENSG00000243943|Q96ME7-3|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3798217773438	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.86348	1	2670	2670		31.53	2.3598	1	352020			23286	8815	15744	15754	26750	26750					0.15525931110823876
KRKVLQDLVP	10	Unmodified	_KRKVLQDLVP_					0	0	0		nc|ENSG00000243943|Q96ME7-2|ZNF512;ENSG00000243943|ENST00000355467|ZNF512;ENST00000505973.1_1_2:27821100-27852768:+|nuORF;nc|ENSG00000243943|Q96ME7-3|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3826293945312	2	598.379697	1194.74484	-0.19423	-0.00011622	3.3027	0.0019763	3.1085	0.00186	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.86047	1	2974	2974		23.523	2.5758	1	825320			23287	8815	15744	15754	26751	26751					0.15525931110823876
KRKVLQDLVP	10	Unmodified	_KRKVLQDLVP_					0	0	0		nc|ENSG00000243943|Q96ME7-2|ZNF512;ENSG00000243943|ENST00000355467|ZNF512;ENST00000505973.1_1_2:27821100-27852768:+|nuORF;nc|ENSG00000243943|Q96ME7-3|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.3815307617188	2	598.379697	1194.74484	-0.74115	-0.00044349	3.5243	0.0021089	2.7832	0.0016654	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.86587	1	3078	3078		29.17	2.4771	1	772980			23288	8815	15744	15754	26752	26752					0.15525931110823876
KRKVLQDLVP	10	Unmodified	_KRKVLQDLVP_					0	0	0		nc|ENSG00000243943|Q96ME7-2|ZNF512;ENSG00000243943|ENST00000355467|ZNF512;ENST00000505973.1_1_2:27821100-27852768:+|nuORF;nc|ENSG00000243943|Q96ME7-3|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	598.3775634765625	2	598.379697	1194.74484	0.84734	0.00050703	2.4098	0.001442	3.2572	0.001949	598.3810873389388	40.888	1.2283	40.892	40.311	41.539	0.0043983					77	44	2	0	0	0	0.86621	1	2603	2603		26.063	6.9599	1	407900			23289	8815	15744	15754	26753	26753					0.15525931110823876
KRLAAAVP	8	Unmodified	_KRLAAAVP_					0	0	0			REV__ENST00000426250.3_1_12:72666801-72667203:-|nuORF	REV__ENST00000426250.3_1_12:72666801-72667203:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2663269042969	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.336	1	69.471	68.971	69.971	0.13522								0	0	0	0.29498	1	6265	6265		26.796	0	1		+		23290	26542	15745	15755	26754	26754					0.10394116205179671
KRLAEPRG	8	Unmodified	_KRLAEPRG_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7829284667969	2	463.780151	925.545748	-2.226	-0.0010324	-1.7375	-0.00080582	-3.9635	-0.0018382	463.77924988782166	40.526	1.7931	40.918	39.408	41.202	0.39209					79	45	2	0	0	0	0.91472	1	3484	3484		44.117	1.6423	1	9649600	+		23291	17017	15746	15756	26755	26755					0.079997156028071
KRLAGAGAP	9	Unmodified	_KRLAGAGAP_					0	0	0			REV__ENST00000505086.2_1_5:140019102-140021704:+|nuORF	REV__ENST00000505086.2_1_5:140019102-140021704:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.7543029785156	2	420.756144	839.497735	0.50279	0.00021155	-2.8874	-0.0012149	-2.3846	-0.0010033	420.754847228136	20.716	1.1231	20.695	19.83	20.953	-0.020922					79	56	2	0	0	0	0.7932	1	499	499		12.959	0	1	122120	+		23292	27874	15747	15757	26756	26756					0.07156641682752252
KRLAMEKVQL	10	Unmodified	_KRLAMEKVQL_					0	0	0			REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.9122009277344	3	405.912914	1214.71691	1.2294	0.00049903	-3.3362	-0.0013542	-2.1068	-0.00085518	405.9115005832532	37.578	1.9473	37.891	36.841	38.788	0.31312					140	48	5	0	0	0	0.26675	1	3039	3039		76.17	7.3841	1	6110800	+		23293	19887	15748	15758	26757	26757					0.11814284859110558
KRLAQLYR	8	Unmodified	_KRLAQLYR_					0	0	0		nc|ENSG00000143199|Q96PN6-4|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;ENSG00000143199|ENST00000367851|ADCY10;nc|ENSG00000143199|Q96PN6-3|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.3250122070312	2	524.324725	1046.6349	0.12864	6.7451E-05	-4.3037	-0.0022565	-4.1751	-0.0021891	524.3219356184657	31.865	0.64216	31.992	31.733	32.375	0.12643					33	14	3	0	0	0	0.8347	1	2181	2181		23.042	2.0956	1	249000			23294	4611	15749	15759	26758	26758					0.11344550562330369
KRLAQLYR	8	Unmodified	_KRLAQLYR_					0	0	0		nc|ENSG00000143199|Q96PN6-4|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;ENSG00000143199|ENST00000367851|ADCY10;nc|ENSG00000143199|Q96PN6-3|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	524.324725	1046.6349	0.64456	0.00033796	-5.1165	-0.0026827	-4.472	-0.0023448	524.3216129688309	31.803	0.64225	31.91	31.632	32.274	0.10707	-0.041115	-0.00041396	NaN	23.042	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	255970			23295	4611	15749	15759							0.11344550562330369
KRLAVGLL	8	Unmodified	_KRLAVGLL_					0	0	0			REV__ENSG00000115170|ENST00000434821|ACVR1	REV__ENSG00000115170|ENST00000434821|ACVR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2999267578125	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.81724	1	6768	6768		14.664	0	1	1680500	+		23296	18090	15750	15760	26759	26759					0.14627262273381803
KRLAVGLL	8	Unmodified	_KRLAVGLL_					0	0	0			REV__ENSG00000115170|ENST00000434821|ACVR1	REV__ENSG00000115170|ENST00000434821|ACVR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.29998779296875	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.86294	1	6496	6496		8.8223	0	1	2081500	+		23297	18090	15750	15760	26760	26760					0.14627262273381803
KRLEDLVKKH	10	Unmodified	_KRLEDLVKKH_					0	0	0		ENSG00000047662|ENST00000265018|FAM184B	ENSG00000047662|ENST00000265018|FAM184B	ENSG00000047662|ENST00000265018|FAM184B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5924987792969	3	422.594461	1264.76155	-0.026175	-1.1061E-05	-4.2947	-0.0018149	-4.3209	-0.001826	422.59256755528145	49.138	2.4235	49.133	48.474	50.898	-0.0056419					208	62	5	0	0	0	0.86621	1	4075	4075		26.063	0.9956	1	1959300			23298	968	15751	15761	26761	26761					0.13976431996798055
KRLEEIMKR	9	Unmodified	_KRLEEIMKR_					0	0	0		nc|ENSG00000116871|Q3KQU3-2|MAP7D1;nc|ENSG00000116871|Q3KQU3-4|MAP7D1;ENSG00000116871|ENST00000474796|MAP7D1;nc|ENSG00000116871|Q3KQU3|MAP7D1;nc|ENSG00000116871|Q3KQU3-3|MAP7D1;ENST00000373148.5_1_1:36643158-36645856:+|nuORF;nc|ENSG00000135525|Q14244-5|MAP7;nc|ENSG00000135525|Q14244-3|MAP7;nc|ENSG00000135525|Q14244-2|MAP7;nc|ENSG00000135525|Q14244-6|MAP7;nc|ENSG00000135525|Q14244-4|MAP7;ENSG00000135525|ENST00000354570|MAP7;nc|ENSG00000135525|Q14244-7|MAP7	nc|ENSG00000116871|Q3KQU3-2|MAP7D1;nc|ENSG00000135525|Q14244-5|MAP7	nc|ENSG00000135525|Q14244-5|MAP7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.858154296875	2	601.855532	1201.69651	3.2383	0.001949	0.2335	0.00014054	3.4718	0.0020895	601.8555799865445	103.53	2.0205	103.49	103.12	105.14	-0.043755					118	48	4	0	0	0	0.76255	1	11321	11321		35.618	0	1	1395200			23299	4031;2952	15752	15762	26762	26762					0.10373114199296651
KRLEEVLCHA	10	Unmodified	_KRLEEVLCHA_					0	0	0			REV__nc|ENSG00000138115|P10632-2|CYP2C8	REV__nc|ENSG00000138115|P10632-2|CYP2C8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3231811523438	2	599.324065	1196.63358	0.89729	0.00053777	-3.7851	-0.0022685	-2.8878	-0.0017307	599.3217573684728	59.535	0.63619	59.629	59.325	59.962	0.094059					36	17	3	0	0	0	0.46422	1	5112	5112		58.782	2.0609	1	201970	+		23300	19442	15753	15763	26763	26763					0.043125484112579215
KRLEHSGT	8	Unmodified	_KRLEHSGT_					0	0	0		ENSG00000170037|ENST00000563694|CNTROB	ENSG00000170037|ENST00000563694|CNTROB	ENSG00000170037|ENST00000563694|CNTROB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.25396728515625	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.89494	1	9792	9792		37.159	3.6435	1	1215000			23301	6554	15754	15764	26764	26764					0.02719132469201213
KRLEKLNPVV	10	Unmodified	_KRLEKLNPVV_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.382080078125	2	598.379697	1194.74484	-0.74115	-0.00044349	3.5243	0.0021089	2.7832	0.0016654	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.86348	1	3023	3023		31.53	12.426	1	772980	+		23302	20437;29946	15755	15765	26765	26765					0.15525931110823876
KRLEKLNPVV	10	Unmodified	_KRLEKLNPVV_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3821411132812	2	598.379697	1194.74484	-1.3328	-0.00079753	3.7818	0.002263	2.449	0.0014655	598.3818526094551	40.308	0.87541	40.701	40.092	40.968	0.39209					91	22	5	0	0	0	0.8608	1	3393	3393		34.173	2.6427	1	10750000	+		23303	20437;29946	15755	15765	26766	26766					0.15525931110823876
KRLFAKYG	8	Unmodified	_KRLFAKYG_					0	0	0		nc|ENSG00000116560|P23246-2|SFPQ;ENSG00000116560|ENST00000357214|SFPQ	nc|ENSG00000116560|P23246-2|SFPQ	nc|ENSG00000116560|P23246-2|SFPQ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958679199219	2	491.795269	981.575986	-0.70573	-0.00034708	1.5523	0.0007634	0.84654	0.00041632	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.86288	1	4418	4418		26.796	0	1	772710			23304	2926	15756	15766	26767	26767					0.08446074267988024
KRLFKSFG	8	Unmodified	_KRLFKSFG_					0	0	0		ENSG00000005189|ENST00000261377|REXO5;nc|ENSG00000005189|Q96IC2-2|REXO5	ENSG00000005189|ENST00000261377|REXO5	ENSG00000005189|ENST00000261377|REXO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7957458496094	2	491.795269	981.575986	-0.86128	-0.00042357	1.3952	0.00068615	0.53392	0.00026258	491.79583711541846	45.285	1.262	45.254	44.708	45.97	-0.031067					74	28	3	0	0	0	0.85277	1	3665	3665		25.45	4.9683	1	480390			23305	676	15757	15767	26768	26768					0.08446074267999393
KRLFKSFG	8	Unmodified	_KRLFKSFG_					0	0	0		ENSG00000005189|ENST00000261377|REXO5;nc|ENSG00000005189|Q96IC2-2|REXO5	ENSG00000005189|ENST00000261377|REXO5	ENSG00000005189|ENST00000261377|REXO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79547119140625	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.85277	1	4321	4321		25.45	1.2474	1	1111900			23306	676	15757	15767	26769	26769					0.08446074267999393
KRLFKSFG	8	Unmodified	_KRLFKSFG_					0	0	0		ENSG00000005189|ENST00000261377|REXO5;nc|ENSG00000005189|Q96IC2-2|REXO5	ENSG00000005189|ENST00000261377|REXO5	ENSG00000005189|ENST00000261377|REXO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7962341308594	2	491.795269	981.575986	-0.36021	-0.00017715	1.3022	0.0006404	0.94195	0.00046325	491.79587618632917	55.368	1.5692	55.341	54.702	56.271	-0.027279					123	47	4	0	0	0	0.84341	2	4997	4997;5093		33.516	2.5004	1	1374900			23307	676	15757	15767	26770;26771	26770					0.08446074267999393
KRLFKSFG	8	Unmodified	_KRLFKSFG_					0	0	0		ENSG00000005189|ENST00000261377|REXO5;nc|ENSG00000005189|Q96IC2-2|REXO5	ENSG00000005189|ENST00000261377|REXO5	ENSG00000005189|ENST00000261377|REXO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79541015625	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.87479	1	4089	4089		30.504	7.4612	1	1232600			23308	676	15757	15767	26772	26772					0.08446074267999393
KRLFKSFG	8	Unmodified	_KRLFKSFG_					0	0	0		ENSG00000005189|ENST00000261377|REXO5;nc|ENSG00000005189|Q96IC2-2|REXO5	ENSG00000005189|ENST00000261377|REXO5	ENSG00000005189|ENST00000261377|REXO5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958068847656	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.87922	1	4622	4622		31.955	6.5047	1	1759500			23309	676	15757	15767	26773	26773					0.08446074267999393
KRLFKSFG	8	Unmodified	_KRLFKSFG_					0	0	0		ENSG00000005189|ENST00000261377|REXO5;nc|ENSG00000005189|Q96IC2-2|REXO5	ENSG00000005189|ENST00000261377|REXO5	ENSG00000005189|ENST00000261377|REXO5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7955017089844	2	491.795269	981.575986	-0.12437	-6.1163E-05	0.93789	0.00046125	0.81352	0.00040009	491.7955803973609	45.417	1.3583	45.348	44.556	45.914	-0.06863					81	33	3	0	0	0	0.85277	1	3249	3249		25.45	6.0902	1	439300			23310	676	15757	15767	26774	26774					0.08446074267999393
KRLFWISRKKV	11	Unmodified	_KRLFWISRKKV_					0	0	0		ENST00000537638.6_1_12:57881209-57881347:+|nuORF	ENST00000537638.6_1_12:57881209-57881347:+|nuORF	ENST00000537638.6_1_12:57881209-57881347:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	488.2388000488281	3	487.645267	1459.91397	-0.77388	-0.00037738	3.1891	0.0015551	2.4152	0.0011777	487.6468603800542	49.679	1.0775	49.704	49.287	50.365	0.025574					61	28	3	0	0	0	0.18159	1	3918	3918		12.433	9.2215	1	149040			23311	13453	15758	15768	26775	26775					0.20241252464165882
KRLFWISRKKV	11	Unmodified	_KRLFWISRKKV_					0	0	0		ENST00000537638.6_1_12:57881209-57881347:+|nuORF	ENST00000537638.6_1_12:57881209-57881347:+|nuORF	ENST00000537638.6_1_12:57881209-57881347:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	488.2388916015625	3	487.645267	1459.91397	-0.30106	-0.00014681	2.4312	0.0011856	2.1301	0.0010387	487.64646562703825	49.807	1.119	49.714	49.23	50.349	-0.093182					55	27	3	0	0	0	0.18068	1	3925	3925		7.6794	4.4681	1	139980			23312	13453	15758	15768	26776	26776					0.20241252464165882
KRLGALYHTGQ	11	Unmodified	_KRLGALYHTGQ_					0	0	0		ENST00000216129.6_1_22:43563239-43563701:-|nuORF	ENST00000216129.6_1_22:43563239-43563701:-|nuORF	ENST00000216129.6_1_22:43563239-43563701:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.34765625	2	622.348929	1242.6833	-0.2781	-0.00017307	-2.341	-0.0014569	-2.6191	-0.00163	622.3475674365299	96.114	2.8356	96.18	95.181	98.017	0.06591					140	66	3	0	0	0	0.72106	1	10091	10091		28.081	0.19925	1	306120			23313	9129	15759	15769	26777	26777					0.07166999411560937
KRLHPAPG	8	Unmodified	_KRLHPAPG_					0	0	0			REV__nc|ENSG00000078487|Q9H0M4-3|ZCWPW1	REV__nc|ENSG00000078487|Q9H0M4-3|ZCWPW1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2632751464844	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.81548	2	2521	2521;2612		28.254	1.4582	1	3673500	+		23314	27631	15760	15770	26778;26779	26778					0.07144347919643224
KRLHPAPG	8	Unmodified	_KRLHPAPG_					0	0	0			REV__nc|ENSG00000078487|Q9H0M4-3|ZCWPW1	REV__nc|ENSG00000078487|Q9H0M4-3|ZCWPW1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633361816406	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.81548	1	3215	3215		20.482	1.1219	1	4268300	+		23315	27631	15760	15770	26780	26780					0.07144347919643224
KRLHPAPG	8	Unmodified	_KRLHPAPG_					0	0	0			REV__nc|ENSG00000078487|Q9H0M4-3|ZCWPW1	REV__nc|ENSG00000078487|Q9H0M4-3|ZCWPW1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2634582519531	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.86791	1	2840	2840		28.254	7.7724	1	22924000	+		23316	27631	15760	15770	26781	26781					0.07144347919643224
KRLHPAPG	8	Unmodified	_KRLHPAPG_					0	0	0			REV__nc|ENSG00000078487|Q9H0M4-3|ZCWPW1	REV__nc|ENSG00000078487|Q9H0M4-3|ZCWPW1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26251220703125	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.89457	2	2587	2587;2613		37.028	1.8278	1	22029000	+		23317	27631	15760	15770	26782;26783	26782					0.07144347919643224
KRLILLIQKK	10	Unmodified	_KRLILLIQKK_					0	0	0			REV__ENST00000354566.7_1_11:85436805-85436946:-|nuORF	REV__ENST00000354566.7_1_11:85436805-85436946:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2973937988281	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.455	1	76.854	76.354	77.354	0.39969								0	0	0	0.45132	1	8678	8678		7.8045	1.8035	1		+		23318	25358	15761	15771	26784	26784					0.25959946829675573
KRLILLIQKK	10	Unmodified	_KRLILLIQKK_					0	0	0			REV__ENST00000354566.7_1_11:85436805-85436946:-|nuORF	REV__ENST00000354566.7_1_11:85436805-85436946:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2978820800781	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.923	1	77.323	76.823	77.823	0.39969								0	0	0	0.45132	1	8740	8740		7.0187	0.35908	1		+		23319	25358	15761	15771	26785	26785					0.25959946829675573
KRLINWAY	8	Unmodified	_KRLINWAY_					0	0	0			REV__ENST00000609175.1_1_13:53261778-53261967:+|nuORF	REV__ENST00000609175.1_1_13:53261778-53261967:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.305419921875	2	532.306001	1062.59745	0.43555	0.00023184	-0.78733	-0.0004191	-0.35178	-0.00018726	532.305484897522	32.718	0.63803	32.844	32.59	33.228	0.12642					37	14	3	0	0	0	0.65768	1	2321	2321		69.093	0.60827	1	700760	+		23320	29409	15762	15772	26786	26786					0.06865459296705012
KRLIYVLYK	9	Unmodified	_KRLIYVLYK_					0	0	0			REV__ENSG00000006283|ENST00000359106|CACNA1G	REV__ENSG00000006283|ENST00000359106|CACNA1G	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.3818969726562	2	598.381709	1194.74886	-2.4045	-0.0014388	1.9021	0.0011382	-0.50239	-0.00030062	598.3827122218626	40.848	1.3552	40.855	40.235	41.59	0.0065727					86	35	3	0	0	0	0.78058	2	3036	3036;3050		30.504	6.5693	1	583190	+		23321	16099	15763	15773	26787;26788	26787					0.15928020604565063
KRLKEHLTESL	11	Unmodified	_KRLKEHLTESL_					0	0	0		nc|ENSG00000101928|Q9UJG1-2|MOSPD1;ENSG00000101928|ENST00000370783|MOSPD1;nc|ENSG00000101928|Q9UJG1-3|MOSPD1	nc|ENSG00000101928|Q9UJG1-2|MOSPD1	nc|ENSG00000101928|Q9UJG1-2|MOSPD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9318542480469	3	451.933143	1352.7776	1.2229	0.00055267	-2.1103	-0.00095371	-0.88738	-0.00040104	451.93203668437076	98.85	2.391	98.898	97.373	99.764	0.048164					142	55	4	0	0	0	0.71207	1	10590	10590		29.551	9.5203	1	439970			23322	1971	15764	15774	26789	26789					0.1153209344302013
KRLKELEKGH	10	Unmodified	_KRLKELEKGH_					0	0	0			REV__ENSG00000198087|ENST00000359314|CD2AP	REV__ENSG00000198087|ENST00000359314|CD2AP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.3729858398438	2	619.372404	1236.73025	0.91931	0.0005694	-1.0988	-0.00068059	-0.17952	-0.00011119	619.3720836676316	101.53	1.7011	101.67	101.29	102.99	0.14102					92	41	4	0	0	0	0.86763	1	10699	10699		26.693	3.6504	1	2053400	+		23323	23297	15765	15775	26790	26790					0.12135858962687962
KRLKELEKGH	10	Unmodified	_KRLKELEKGH_					0	0	0			REV__ENSG00000198087|ENST00000359314|CD2AP	REV__ENSG00000198087|ENST00000359314|CD2AP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3727416992188	2	619.372404	1236.73025	3.0782	0.0019065	-4.3798	-0.0027127	-1.3016	-0.00080619	619.8710459081657	101.29	0.9677	101.61	101.32	102.29	0.32511					61	26	3	0	0	0	0.8651	1	12302	12302		25.574	2.0514	1	2930100	+		23324	23297	15765	15775	26791	26791					0.12135858962687962
KRLKEYRVF	9	Unmodified	_KRLKEYRVF_					0	0	0		ENST00000424459.7_2_5:56471743-56471803:+|nuORF	ENST00000424459.7_2_5:56471743-56471803:+|nuORF	ENST00000424459.7_2_5:56471743-56471803:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8693237304688	2	619.87204	1237.72953	-0.2143	-0.00013284	-4.1033	-0.0025435	-4.3176	-0.0026764	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.78058	1	9319	9319		30.504	0.18592	1	1169100			23325	11517	15766	15776	26792	26792					0.12017064313636183
KRLKEYRVF	9	Unmodified	_KRLKEYRVF_					0	0	0		ENST00000424459.7_2_5:56471743-56471803:+|nuORF	ENST00000424459.7_2_5:56471743-56471803:+|nuORF	ENST00000424459.7_2_5:56471743-56471803:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8687133789062	2	619.87204	1237.72953	-0.30632	-0.00018988	-4.2007	-0.0026039	-4.507	-0.0027938	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.76255	1	9886	9886		35.618	8.9254	1	2103100			23326	11517	15766	15776	26793	26793					0.12017064313636183
KRLKEYRVF	9	Unmodified	_KRLKEYRVF_					0	0	0		ENST00000424459.7_2_5:56471743-56471803:+|nuORF	ENST00000424459.7_2_5:56471743-56471803:+|nuORF	ENST00000424459.7_2_5:56471743-56471803:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.868896484375	2	619.87204	1237.72953	-1.2246	-0.00075908	-3.2008	-0.0019841	-4.4254	-0.0027432	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.74721	1	9463	9463		37.159	6.6555	1	3118800			23327	11517	15766	15776	26794	26794					0.12017064313636183
KRLKPLIPGLR	11	Unmodified	_KRLKPLIPGLR_					0	0	0		nc|ENSG00000145734|A6H8Y1-7|BDP1;nc|ENSG00000145734|A6H8Y1-6|BDP1;ENSG00000145734|ENST00000358731|BDP1	nc|ENSG00000145734|A6H8Y1-7|BDP1	nc|ENSG00000145734|A6H8Y1-7|BDP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2974853515625	3	430.962597	1289.86596	-0.28876	-0.00012444	-2.3018	-0.00099201	-2.5906	-0.0011164	430.960988463707	38.15	1.1815	38.492	38.009	39.191	0.34187					93	29	5	0	0	0	0.85439	1	3137	3137		5.6988	1.36	1	719870			23328	4789	15767	15777	26795	26795					0.23262178544155176
KRLLEQNTL	9	Unmodified	_KRLLEQNTL_					0	0	0			REV__nc|ENSG00000119777|Q6NUQ4-2|TMEM214	REV__nc|ENSG00000119777|Q6NUQ4-2|TMEM214	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	557.8294067382812	2	557.83258	1113.65061	-1.4267	-0.00079583	-1.6573	-0.00092449	-3.0839	-0.0017203	557.8315827372627	100.97	1.6229	101.12	100.62	102.24	0.15505					78	39	3	0	0	0	0.76764	1	10496	10496		34.173	1.3601	1	900390	+		23329	18377	15768	15778	26796	26796					0.09832792288693781
KRLLFAMIQ	9	Unmodified	_KRLLFAMIQ_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3363647460938	2	560.338987	1118.66342	3.1432	0.0017612	-0.54994	-0.00030816	2.5932	0.0014531	560.3385698179089	105.88	1.8636	105.84	105.1	106.97	-0.03714					103	43	3	0	0	0	0.78536	1	11724	11724		29.15	1.0681	1	1086900	+		23330	18793	15769	15779	26797	26797					0.10883532147249753
KRLLFMLVF	9	Unmodified	_KRLLFMLVF_					0	0	0			REV__ENSG00000048462|ENST00000053243|TNFRSF17	REV__ENSG00000048462|ENST00000053243|TNFRSF17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.8585815429688	2	583.859555	1165.70456	-0.018036	-1.053E-05	-1.0244	-0.00059812	-1.0425	-0.00060865	583.8586981991532	98.483	2.4194	98.532	98.099	100.52	0.048157					136	55	4	0	0	0	0.7932	1	10592	10592		26.796	0.73272	1	1823400	+		23331	16366	15770	15780	26798	26798					0.12833293186736228
KRLLFMLVF	9	Unmodified	_KRLLFMLVF_					0	0	0			REV__ENSG00000048462|ENST00000053243|TNFRSF17	REV__ENSG00000048462|ENST00000053243|TNFRSF17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	583.858154296875	2	583.859555	1165.70456	0.74064	0.00043243	-1.9093	-0.0011148	-1.1686	-0.00068233	583.8582354915881	98.447	2.0436	98.675	98.127	100.17	0.22788					107	47	4	0	0	0	0.7932	1	10244	10244		26.796	2.5934	1	1023000	+		23332	16366	15770	15780	26799	26799					0.12833293186736228
KRLLIGGI	8	Unmodified	_KRLLIGGI_					0	0	0			REV__ENST00000490310.1_1_1:149903106-149903271:-|nuORF	REV__ENST00000490310.1_1_1:149903106-149903271:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3003234863281	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.80706	1	7219	7219		19.36	0	1	1921500	+		23333	27635	15771	15781	26800	26800					0.14627262273381803
KRLLIGVA	8	Unmodified	_KRLLIGVA_					0	0	0			REV__ENST00000413765.6_1_7:108039937-108039973:-|nuORF	REV__ENST00000413765.6_1_7:108039937-108039973:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.300537109375	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.81724	1	7385	7385		14.664	0	1	881780	+		23334	26396	15772	15782	26801	26801					0.14627262273370434
KRLLLVGA	8	Unmodified	_KRLLLVGA_					0	0	0		nc|ENSG00000091409|P23229-4|ITGA6;ENSG00000091409|ENST00000684293|ITGA6;nc|ENSG00000091409|P23229-5|ITGA6;nc|ENSG00000091409|P23229-3|ITGA6;nc|ENSG00000091409|P23229-9|ITGA6;nc|ENSG00000091409|P23229-6|ITGA6;nc|ENSG00000091409|P23229|ITGA6	nc|ENSG00000091409|P23229-4|ITGA6	nc|ENSG00000091409|P23229-4|ITGA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3002624511719	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.82419	1	6642	6642		13.775	0	1	1852500			23335	1675	15773	15783	26802	26802					0.14627262273370434
KRLLSVPKLIP	11	Unmodified	_KRLLSVPKLIP_					0	0	0			REV__ENSG00000083168|ENST00000265713|KAT6A	REV__ENSG00000083168|ENST00000265713|KAT6A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.428955078125	2	632.42919	1262.84383	1.4625	0.00092494	0.26374	0.0001668	1.7263	0.0010917	632.4290749625486	109.97	1.0949	110.09	109.45	110.55	0.1229					123	44	3	0	0	0	0.79584	1	11800	11800		12.207	1.9414	1	9073500	+		23336	16848	15774	15784	26803	26803					0.22291954075762987
KRLLVPCK	8	Unmodified	_KRLLVPCK_					0	0	0			REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8037414550781	2	478.807322	955.600092	-1.7576	-0.00084154	-0.70314	-0.00033667	-2.4607	-0.0011782	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.86288	1	2666	2666		26.796	0	1	336090	+		23337	18130	15775	15785	26804	26804					0.12051591430008557
KRLLVPCK	8	Unmodified	_KRLLVPCK_					0	0	0			REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.80517578125	2	478.807322	955.600092	-2.669	-0.0012779	-0.055798	-2.6716E-05	-2.7248	-0.0013047	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.86288	1	2834	2834		26.796	2.5934	1	370420	+		23338	18130	15775	15785	26805	26805					0.12051591430008557
KRLLVPCK	8	Unmodified	_KRLLVPCK_					0	0	0			REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.806884765625	2	478.807322	955.600092	-0.92451	-0.00044266	-1.2507	-0.00059887	-2.1753	-0.0010415	478.80664804898805	39.433	1.9403	39.444	38.3	40.24	0.010708					89	52	2	0	0	0	0.79929	1	2412	2412		18.324	1.8513	1	287670	+		23339	18130	15775	15785	26806	26806					0.12051591430008557
KRLLVPCK	8	Unmodified	_KRLLVPCK_					0	0	0			REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.80621337890625	2	478.807322	955.600092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.354	1	39.301	38.801	39.801	-0.052731								0	0	0	0.30252	1	2404	2404		19.36	1.0356	1		+		23340	18130	15775	15785	26807	26807					0.12051591430008557
KRLLVPCK	8	Unmodified	_KRLLVPCK_					0	0	0			REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.8043518066406	2	478.807322	955.600092	-1.0213	-0.00048898	-2.9417	-0.0014085	-3.963	-0.0018975	478.80577246421075	40.154	1.6745	40.522	39.134	40.808	0.36797					102	40	4	0	0	0	0.89962	1	3424	3424		38.806	3.6054	1	2523100	+		23341	18130	15775	15785	26808	26808					0.12051591430008557
KRLLVPCK	8	Unmodified	_KRLLVPCK_					0	0	0			REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.8022155761719	2	478.807322	955.600092	-2.1913	-0.0010492	-2.1705	-0.0010393	-4.3618	-0.0020885	478.8061406240579	40.099	1.5963	40.688	39.312	40.908	0.58915					89	37	4	0	0	0	0.84341	2	3419	3393;3419		25.45	0	1	1970000	+		23342	18130	15775	15785	26809;26810	26810					0.12051591430008557
KRLNNKQEREN	11	Unmodified	_KRLNNKQEREN_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	476.9271545410156	3	476.927051	1427.75932	0.41822	0.00019946	1.2021	0.00057332	1.6203	0.00077278	476.9276562765041	32.486	0.55951	32.613	32.289	32.848	0.12642					25	12	3	0	0	0	0.69687	1	2278	2278		32.034	0.96598	1	121120	+		23343	20267	15776	15786	26811	26811					0.06255351521053854
KRLNNKQEREN	11	Unmodified	_KRLNNKQEREN_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	476.927051	1427.75932	0.27121	0.00012935	2.4846	0.001185	2.7558	0.0013143	477.2623118714667	32.884	0.11088	32.852	32.78	32.891	-0.032677	0.14868	0.0008476	NaN	32.034	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47413	+		23344	20267	15776	15786							0.06255351521053854
KRLNNKQEREN	11	Unmodified	_KRLNNKQEREN_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	476.927051	1427.75932	0.41822	0.00019946	1.2021	0.00057332	1.6203	0.00077278	476.9276562765041	32.486	0.55951	32.613	32.289	32.848	0.12642	-0.090338	-0.00098737	NaN	32.034	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121120	+		23345	20267	15776	15786							0.06255351521053854
KRLNNKQEREN	11	Unmodified	_KRLNNKQEREN_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	476.927051	1427.75932	-0.27064	-0.00012908	2.3838	0.0011369	2.1131	0.0010078	476.9281824049148	32.473	0.93291	32.645	32.382	33.315	0.17141	-0.058341	0.00070334	NaN	32.034	27	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147800	+		23346	20267	15776	15786							0.06255351521053854
KRLPLEILEFV	11	Unmodified	_KRLPLEILEFV_					0	0	0		ENSG00000182621|ENST00000338037|PLCB1	ENSG00000182621|ENST00000338037|PLCB1	ENSG00000182621|ENST00000338037|PLCB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.9482727050781	3	452.946501	1355.81767	2.7606	0.0012504	1.4075	0.00063754	4.1682	0.001888	452.94702271290186	107.29	1.0208	107.26	106.62	107.64	-0.034134					78	23	5	0	0	0	0.73621	1	11868	11868		25.126	4.811	1	3060000			23347	7465	15777	15787	26812	26812					0.1539964011358279
KRLPYFPIVN	10	Unmodified	_KRLPYFPIVN_					0	0	0		ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	623.8710327148438	2	623.868966	1245.72338	2.9437	0.0018365	-0.67016	-0.00041809	2.2735	0.0014184	623.8684944495797	104.68	1.864	104.64	104.19	106.05	-0.04039					120	44	4	0	0	0	0.86718	1	11526	11526		27.882	1.1893	1	1509700			23348	6032	15778	15788	26813	26813					0.11034546082123597
KRLPYFPIVN	10	Unmodified	_KRLPYFPIVN_					0	0	0		ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.871826171875	2	623.868966	1245.72338	0.9237	0.00057627	1.3225	0.00082505	2.2462	0.0014013	623.8696844669474	104.46	2.0179	104.58	104.11	106.13	0.11684					143	50	4	0	0	0	0.85934	1	11048	11048		35.618	7.736	1	2763900			23349	6032	15778	15788	26814	26814					0.11034546082123597
KRLPYFPIVN	10	Unmodified	_KRLPYFPIVN_					0	0	0		ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	623.8710327148438	2	623.868966	1245.72338	-1.2116	-0.00075585	3.4799	0.002171	2.2684	0.0014152	623.8710403744353	104.48	2.0404	104.58	104.1	106.14	0.093857					153	50	5	0	0	0	0.86718	3	10985	10985;11020;11105		27.882	2.3082	1	2931600			23350	6032	15778	15788	26815;26816;26817	26815					0.11034546082123597
KRLQEILKQN	10	Unmodified	_KRLQEILKQN_					0	0	0		ENSG00000009413|ENST00000368802|REV3L;nc|ENSG00000009413|O60673-2|REV3L	ENSG00000009413|ENST00000368802|REV3L	ENSG00000009413|ENST00000368802|REV3L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.9100341796875	3	423.9261	1268.75647	-0.54892	-0.0002327	1.0662	0.00045201	0.51733	0.00021931	423.92627546149873	31.13	0.52602	31.21	30.945	31.471	0.079836					18	11	2	0	0	0	0.37624	1	2068	2068		30.569	7.191	1	43731			23351	754	15779	15789	26818	26818					0.13284128134182538
KRLRAVSP	8	Unmodified	_KRLRAVSP_					0	0	0		nc|ENSG00000196843|Q03989-5|ARID5A;ENSG00000196843|ENST00000357485|ARID5A;ENST00000497920.1_1_2:97215573-97218047:+|nuORF	nc|ENSG00000196843|Q03989-5|ARID5A	nc|ENSG00000196843|Q03989-5|ARID5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8004455566406	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.80706	1	3516	3516		19.36	1.0356	1	1570500			23352	8107	15780	15790	26819	26819					0.1163659249950797
KRLRTDKHSL	10	Unmodified	_KRLRTDKHSL_					0	0	0		ENST00000513726.5_1_4:1932463-1953839:+|nuORF;nc|ENSG00000109685|O96028-5|NSD2;nc|ENSG00000109685|O96028-3|NSD2;ENSG00000109685|ENST00000508803|NSD2	ENST00000513726.5_1_4:1932463-1953839:+|nuORF;nc|ENSG00000109685|O96028-5|NSD2	ENST00000513726.5_1_4:1932463-1953839:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3828735351562	2	627.375478	1252.7364	6.5825	0.0041297	4.0117	0.0025168	10.594	0.0066465	627.3778931643454	110.88	0.7373	110.93	110.56	111.3	0.049095					56	30	2	0	0	0	0.86218	1	13489	13489		32.812	4.7309	1	362180			23353	13059;2476	15781	15791	26820	26820					0.12014377194236658
KRLRVQGTIIA	11	Unmodified	_KRLRVQGTIIA_					0	0	0			REV__ENSG00000148344|ENST00000340607|PTGES	REV__ENSG00000148344|ENST00000340607|PTGES	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.9403076171875	3	418.93834	1253.79319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.314	1	49.355	48.855	49.855	0.040791								0	0	0	0.56276	1	3811	3811		18.531	1.3643	1		+		23354	20110	15782	15792	26821	26821					0.17644424750778853
KRLSAGRVPLI	11	Unmodified	_KRLSAGRVPLI_					0	0	0		nc|ENSG00000091129|Q92823-3|NRCAM;nc|ENSG00000091129|Q92823-4|NRCAM;nc|ENSG00000091129|Q92823-6|NRCAM;nc|ENSG00000091129|Q92823-2|NRCAM;ENSG00000091129|ENST00000379028|NRCAM;nc|ENSG00000091129|Q92823-5|NRCAM	nc|ENSG00000091129|Q92823-3|NRCAM	nc|ENSG00000091129|Q92823-3|NRCAM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.929443359375	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.77511	1	3807	3807		16.53	4.8939	1	2612300			23355	1667	15783	15793	26822	26822					0.1756903972204782
KRLSAGRVPLI	11	Unmodified	_KRLSAGRVPLI_					0	0	0		nc|ENSG00000091129|Q92823-3|NRCAM;nc|ENSG00000091129|Q92823-4|NRCAM;nc|ENSG00000091129|Q92823-6|NRCAM;nc|ENSG00000091129|Q92823-2|NRCAM;ENSG00000091129|ENST00000379028|NRCAM;nc|ENSG00000091129|Q92823-5|NRCAM	nc|ENSG00000091129|Q92823-3|NRCAM	nc|ENSG00000091129|Q92823-3|NRCAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92974853515625	3	403.931185	1208.77173	-0.87886	-0.000355	-3.2249	-0.0013026	-4.1037	-0.0016576	403.9297749934075	46.008	1.1325	46.904	46.447	47.58	0.89542					87	27	4	0	0	0	0.77511	1	4299	4299		16.53	3.0219	1	2092900			23356	1667	15783	15793	26823	26823					0.1756903972204782
KRLSIRTTSAH	11	Unmodified	_KRLSIRTTSAH_					0	0	0			REV__nc|ENSG00000100206|Q14565-2|DMC1	REV__nc|ENSG00000100206|Q14565-2|DMC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8924560546875	2	635.372935	1268.73132	0.93436	0.00059367	0.64118	0.00040739	1.5755	0.0010011	635.3734304671515	105.21	0.19727	105.32	105.19	105.39	0.10765					7	4	2	0	0	0	0.17415	1	11213	11213		33.922	11.342	1	143330	+		23357	17151	15784	15794	26824	26824					0.10770073331627827
KRLSPGGH	8	Unmodified	_KRLSPGGH_					0	0	0		ENST00000457166.5_1_7:66304900-66309725:-|nuORF;ENST00000445681.1_1_7:65958813-65958960:+|nuORF	ENST00000457166.5_1_7:66304900-66309725:-|nuORF	ENST00000457166.5_1_7:66304900-66309725:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2462463378906	2	426.245944	850.477334	-0.71681	-0.00030554	0.86718	0.00036963	0.15037	6.4093E-05	426.24624802256477	87.382	3.0594	87.845	86.168	89.227	0.46312					121	74	2	0	0	0	0.87479	1	10318	10318		30.504	2.2494	1	3022100			23358	11826	15785	15795	26825	26825					0.046114710229517186
KRLSQPAGGL	10	Unmodified	_KRLSQPAGGL_					0	0	0		nc|ENSG00000085978|Q676U5-4|ATG16L1;nc|ENSG00000085978|Q676U5-3|ATG16L1;ENST00000479942.5_1_2:234160473-234198706:+|nuORF;ENSG00000085978|ENST00000392017|ATG16L1	nc|ENSG00000085978|Q676U5-4|ATG16L1	nc|ENSG00000085978|Q676U5-4|ATG16L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.80859375	2	513.806365	1025.59818	0.97987	0.00050346	4.0439	0.0020778	5.0237	0.0025812	513.8083435529123	49.803	1.6726	50.648	49.911	51.584	0.84501					82	40	3	0	0	0	0.86718	1	4874	4874		27.882	2.3082	1	1233800			23359	1546	15786	15796	26826	26826					0.08640253945759468
KRLTIQEALRH	11	Unmodified	_KRLTIQEALRH_					0	0	0		ENST00000558076.1_1_15:64216999-64218270:-|nuORF;ENST00000559007.5_1_15:64204043-64263759:-|nuORF;ENSG00000035664|ENST00000457488|DAPK2;nc|ENSG00000035664|Q9UIK4-2|DAPK2	ENST00000558076.1_1_15:64216999-64218270:-|nuORF	ENST00000558076.1_1_15:64216999-64218270:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6086120605469	3	455.608882	1363.80482	-0.22489	-0.00010246	-0.74709	-0.00034038	-0.97198	-0.00044284	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.70847	1	7585	7585		30.139	0.58839	1	1863900			23360	898	15787	15797	26827	26827					0.13746621774066625
KRLTQPQL	8	Unmodified	_KRLTQPQL_					0	0	0			REV__ENSG00000186910|ENST00000334708|SERPINA11	REV__ENSG00000186910|ENST00000334708|SERPINA11	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.3002014160156	2	492.303458	982.592364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.938	1	59.051	58.551	59.551	0.11396								0	0	0	0.30811	1	5038	5038		45.952	3.5558	1		+		23361	22890	15788	15798	26828	26828					0.10037155434076794
KRLWKFFWEMD	11	Unmodified	_KRLWKFFWEMD_					0	0	0		nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;ENSG00000070182|ENST00000644917|SPTB	nc|ENSG00000070182|P11277-3|SPTB	nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.2727661132812	3	529.27099	1584.79114	0.60484	0.00032013	3.3137	0.0017538	3.9185	0.002074	529.2726734817443	75.667	0.94073	75.8	75.355	76.295	0.13325					87	26	5	0	0	0	0.80813	1	7028	7028		9.6461	0.43434	1	827280			23362	1234	15789	15799	26829	26829					0.022136279506412393
KRLYHLSF	8	Unmodified	_KRLYHLSF_					0	0	0			REV__ENSG00000113838|ENST00000338733|TBCCD1	REV__ENSG00000113838|ENST00000338733|TBCCD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.304931640625	2	532.306001	1062.59745	0.72022	0.00038338	-0.91414	-0.0004866	-0.19392	-0.00010323	532.3053999342459	32.665	0.67791	32.877	32.593	33.271	0.21168					35	15	3	0	0	0	0.92973	1	2309	2309		50.025	7.5501	1	927210	+		23363	18019	15790	15800	26830	26830					0.06865459296705012
KRLYNWSILS	10	Unmodified	_KRLYNWSILS_					0	0	0			REV__nc|ENSG00000127603|Q9UPN3|MACF1	REV__nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.359619140625	2	640.361505	1278.70846	-0.067952	-4.3514E-05	-4.0514	-0.0025944	-4.1194	-0.0026379	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.64457	1	10660	10660		47.657	4.7931	1	640120	+		23364	18743	15791	15801	26831	26831					0.08025054214135707
KRLYPRQIYEK	11	Unmodified	_KRLYPRQIYEK_					0	0	0		chr4:77883392-77885256|16|10.69|0.49|4.46|+|0|None,MRPL1|1	chr4:77883392-77885256|16|10.69|0.49|4.46|+|0|None,MRPL1|1	chr4:77883392-77885256|16|10.69|0.49|4.46|+|0|None,MRPL1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.6249694824219	3	498.624421	1492.85143	-0.6857	-0.00034191	-2.1348	-0.0010645	-2.8205	-0.0014064	498.62329502123123	21.623	1.0354	21.565	21.112	22.147	-0.057203					74	42	2	0	0	0	0.76579	1	596	596		18.531	5.5736	1	54712			23365	433	15792	15802	26832	26832					0.12472061605353701
KRLYYLWML	9	Unmodified	_KRLYYLWML_					0	0	0		ENST00000565923.5_1_15:75287957-75310150:+|nuORF;ENSG00000198794|ENST00000425597|SCAMP5;nc|ENSG00000198794|Q8TAC9-2|SCAMP5	ENST00000565923.5_1_15:75287957-75310150:+|nuORF	ENST00000565923.5_1_15:75287957-75310150:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.36669921875	2	643.359919	1284.70529	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.05	1	116.04	115.54	116.54	-0.0021133								0	0	0	0.31472	1	13944	13944		25.45	0.93098	1				23366	8335	15793	15803	26833	26833					0.07432087835763923
KRMAAVPE	8	Unmodified	_KRMAAVPE_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.24798583984375	2	451.249837	900.485122	-1.5029	-0.0006782	-0.52106	-0.00023513	-2.024	-0.00091333	451.24948444631724	65.955	1.2112	65.955	65.412	66.623	0					127	65	2	0	0	0	0.87922	1	5856	5856		31.955	2.8053	1	815400	+		23367	21394	15794	15804	26834	26834					0.0308986222820522
KRMAAVPE	8	Unmodified	_KRMAAVPE_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.248046875	2	451.249837	900.485122	-1.4716	-0.00066404	-0.81822	-0.00036922	-2.2898	-0.0010333	451.24928193885836	68.02	1.4601	68.02	67.491	68.952	0					124	59	3	0	0	0	0.87064	1	6008	6008		29.15	0	1	151770	+		23368	21394	15794	15804	26835	26835					0.0308986222820522
KRMAAVPE	8	Unmodified	_KRMAAVPE_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.24884033203125	2	451.249837	900.485122	-1.2852	-0.00057995	-0.69752	-0.00031476	-1.9827	-0.00089471	451.2493154558184	65.489	1.09	65.618	64.991	66.081	0.12995					90	51	3	0	0	0	0.84341	1	5780	5780		24.203	0	1	1216500	+		23369	21394	15794	15804	26836	26836					0.0308986222820522
KRMAAVPE	8	Unmodified	_KRMAAVPE_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.2476806640625	2	451.249837	900.485122	0.4571	0.00020627	-2.9752	-0.0013426	-2.5181	-0.0011363	451.2483516516998	67.877	1.2398	68.005	67.282	68.522	0.12748					79	46	2	0	0	0	0.87922	1	6080	6080		31.955	5.2619	1	170990	+		23370	21394	15794	15804	26837	26837					0.0308986222820522
KRMAAVPE	8	Unmodified	_KRMAAVPE_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.247314453125	2	451.249837	900.485122	-1.0589	-0.00047784	-1.4176	-0.0006397	-2.4766	-0.0011175	451.2490578408484	67.679	1.2813	67.739	67.313	68.595	0.059288					106	47	3	0	0	0	0.884	1	6104	6104		33.516	8.0654	1	166740	+		23371	21394	15794	15804	26838	26838					0.0308986222820522
KRMLAPKI	8	Unmodified	_KRMLAPKI_					0	0	0		ENSG00000196132|ENST00000328439|MYT1;nc|ENSG00000196132|Q01538-2|MYT1	ENSG00000196132|ENST00000328439|MYT1	ENSG00000196132|ENST00000328439|MYT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8035583496094	2	478.807322	955.600092	-1.7576	-0.00084154	-0.70314	-0.00033667	-2.4607	-0.0011782	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.7961	1	2683	2683		17.365	3.5896	1	336090			23372	8016	15795	15805	26839	26839					0.12051591430019926
KRMLAPKI	8	Unmodified	_KRMLAPKI_					0	0	0		ENSG00000196132|ENST00000328439|MYT1;nc|ENSG00000196132|Q01538-2|MYT1	ENSG00000196132|ENST00000328439|MYT1	ENSG00000196132|ENST00000328439|MYT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.803955078125	2	478.807322	955.600092	-1.2382	-0.00059286	-3.4197	-0.0016374	-4.6579	-0.0022302	478.80558529591235	40.624	1.0284	40.581	39.923	40.951	-0.042892					45	26	2	0	0	0	0.84341	1	3012	3012		24.203	4.206	1	267990			23373	8016	15795	15805	26840	26840					0.12051591430019926
KRMLAPKI	8	Unmodified	_KRMLAPKI_					0	0	0		ENSG00000196132|ENST00000328439|MYT1;nc|ENSG00000196132|Q01538-2|MYT1	ENSG00000196132|ENST00000328439|MYT1	ENSG00000196132|ENST00000328439|MYT1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8049011230469	2	478.807322	955.600092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.455	1	41.414	40.914	41.914	-0.04081								0	0	0	0.29245	1	3118	3118		30.504	11.144	1				23374	8016	15795	15805	26841	26841					0.12051591430019926
KRMLAPKI	8	Unmodified	_KRMLAPKI_					0	0	0		ENSG00000196132|ENST00000328439|MYT1;nc|ENSG00000196132|Q01538-2|MYT1	ENSG00000196132|ENST00000328439|MYT1	ENSG00000196132|ENST00000328439|MYT1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8047790527344	2	478.807322	955.600092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.627	1	41.586	41.086	42.086	-0.04081								0	0	0	0.29245	1	3143	3143		30.504	2.2494	1				23375	8016	15795	15805	26842	26842					0.12051591430019926
KRMLAPKI	8	Unmodified	_KRMLAPKI_					0	0	0		ENSG00000196132|ENST00000328439|MYT1;nc|ENSG00000196132|Q01538-2|MYT1	ENSG00000196132|ENST00000328439|MYT1	ENSG00000196132|ENST00000328439|MYT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.805908203125	2	478.807322	955.600092	-2.669	-0.0012779	-0.055798	-2.6716E-05	-2.7248	-0.0013047	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.87479	1	2869	2869		30.504	0	1	370420			23376	8016	15795	15805	26843	26843					0.12051591430019926
KRMLAPKI	8	Unmodified	_KRMLAPKI_					0	0	0		ENSG00000196132|ENST00000328439|MYT1;nc|ENSG00000196132|Q01538-2|MYT1	ENSG00000196132|ENST00000328439|MYT1	ENSG00000196132|ENST00000328439|MYT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.80279541015625	2	478.807322	955.600092	-1.0213	-0.00048898	-2.9417	-0.0014085	-3.963	-0.0018975	478.80577246421075	40.154	1.6745	40.522	39.134	40.808	0.36797					102	40	4	0	0	0	0.85277	2	3436	3410;3436		42.474	10.52	1	2523100			23377	8016	15795	15805	26844;26845	26845					0.12051591430019926
KRMLAPKI	8	Unmodified	_KRMLAPKI_					0	0	0		ENSG00000196132|ENST00000328439|MYT1;nc|ENSG00000196132|Q01538-2|MYT1	ENSG00000196132|ENST00000328439|MYT1	ENSG00000196132|ENST00000328439|MYT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.80474853515625	2	478.807322	955.600092	-2.3035	-0.001103	-1.2699	-0.00060806	-3.5735	-0.001711	478.8065191751703	40.757	0.75594	41.347	40.908	41.664	0.58915					57	21	3	0	0	0	0.87922	1	3488	3488		31.955	2.8053	1	3537500			23378	8016	15795	15805	26846	26846					0.12051591430019926
KRNAKNLPA	9	Unmodified	_KRNAKNLPA_					0	0	0			REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.29833984375	2	506.306532	1010.59851	0.27915	0.00014134	4.2913	0.0021727	4.5705	0.0023141	506.30844777739367	42.015	0.86532	42.083	41.661	42.527	0.067947					32	23	2	0	0	0	0.7932	1	2853	2853		23.042	2.0956	1	75943	+		23379	20873	15796	15806	26847	26847					0.09363673665586703
KRNAKNLPA	9	Unmodified	_KRNAKNLPA_					0	0	0			REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	506.306532	1010.59851	-1.5726	-0.00079621	5.8076	0.0029404	4.235	0.0021442	506.3095279570577	42.192	0.72707	42.192	41.808	42.535	0	-0.038572	0.00083567	NaN	23.042	30	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93795	+		23380	20873	15796	15806							0.09363673665586703
KRNAKNLPA	9	Unmodified	_KRNAKNLPA_					0	0	0			REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	506.306532	1010.59851	0.34261	0.00017347	4.2604	0.0021571	4.603	0.0023306	506.30852033397986	42.529	0.97588	42.5	42.034	43.01	-0.029461	0.26947	-0.00073097	NaN	23.042	37	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49537	+		23381	20873	15796	15806							0.09363673665586703
KRNAKNLPA	9	Unmodified	_KRNAKNLPA_					0	0	0			REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	506.306532	1010.59851	-0.97296	-0.00049262	4.863	0.0024622	3.8901	0.0019696	506.3089596450639	42.426	0.73415	42.388	41.977	42.711	-0.038223	0.15783	-0.00012077	NaN	23.042	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67228	+		23382	20873	15796	15806							0.09363673665586703
KRNAKNLPA	9	Unmodified	_KRNAKNLPA_					0	0	0			REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	506.306532	1010.59851	-1.5423	-0.00078085	6.1491	0.0031133	4.6069	0.0023325	506.3096307758861	42.412	0.86427	42.415	42.076	42.94	0.0034142	0.18535	0.0011816	NaN	23.042	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64842	+		23383	20873	15796	15806							0.09363673665586703
KRNAKNLPA	9	Unmodified	_KRNAKNLPA_					0	0	0			REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	506.306532	1010.59851	-0.51271	-0.00025959	4.653	0.0023558	4.1403	0.0020963	506.30884114947827	42.311	0.86882	42.316	41.908	42.776	0.0043983	0.085438	-0.00033345	NaN	23.042	30	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112640	+		23384	20873	15796	15806							0.09363673665586703
KRNAKNLPA	9	Unmodified	_KRNAKNLPA_					0	0	0			REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	506.306532	1010.59851	0.27915	0.00014134	4.2913	0.0021727	4.5705	0.0023141	506.30844777739367	42.015	0.86532	42.083	41.661	42.527	0.067947	-0.14735	-0.0006997	NaN	23.042	32	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75943	+		23385	20873	15796	15806							0.09363673665586703
KRNAKNLPA	9	Unmodified	_KRNAKNLPA_					0	0	0			REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	506.306532	1010.59851	0.037548	1.9011E-05	4.2651	0.0021595	4.3027	0.0021785	506.3087343735954	41.99	0.9819	41.944	41.629	42.611	-0.045467	-0.28562	-0.00072622	NaN	23.042	43	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133410	+		23386	20873	15796	15806							0.09363673665586703
KRNAKNLPA	9	Unmodified	_KRNAKNLPA_					0	0	0			REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	506.306532	1010.59851	-0.82005	-0.0004152	4.2128	0.002133	3.3928	0.0017178	506.30860683316786	41.37	0.57402	42.004	41.743	42.317	0.6339	-0.22655	-0.00077918	NaN	23.042	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	467390	+		23387	20873	15796	15806							0.09363673665586703
KRNASGKI	8	Unmodified	_KRNASGKI_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-5|VPS13B;nc|ENSG00000132549|Q7Z7G8-4|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.265625	2	437.266876	872.519199	-2.1366	-0.00093428	-0.53823	-0.00023535	-2.6749	-0.0011696	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.87922	1	657	657		31.955	3.7006	1	999210			23388	3805	15797	15807	26848	26848					0.0778402671146523
KRNASGKI	8	Unmodified	_KRNASGKI_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-5|VPS13B;nc|ENSG00000132549|Q7Z7G8-4|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2655029296875	2	437.266876	872.519199	0.72217	0.00031578	-3.1375	-0.0013719	-2.4154	-0.0010562	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.88915	1	696	696		35.201	1.6851	1	944940			23389	3805	15797	15807	26849	26849					0.0778402671146523
KRNASGKI	8	Unmodified	_KRNASGKI_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-5|VPS13B;nc|ENSG00000132549|Q7Z7G8-4|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2659606933594	2	437.266876	872.519199	1.7902	0.0007828	-4.1426	-0.0018114	-2.3524	-0.0010286	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.82658	1	767	767		21.96	1.013	1	738160			23390	3805	15797	15807	26850	26850					0.0778402671146523
KRNASGKI	8	Unmodified	_KRNASGKI_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-5|VPS13B;nc|ENSG00000132549|Q7Z7G8-4|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26556396484375	2	437.266876	872.519199	-1.6274	-0.00071159	-1.0909	-0.00047703	-2.7183	-0.0011886	437.2663457196616	22.467	1.2654	22.516	22.142	23.407	0.048553					168	64	5	0	0	0	0.90465	1	681	681		40.573	5.3719	1	1779900			23391	3805	15797	15807	26851	26851					0.0778402671146523
KRNASGKI	8	Unmodified	_KRNASGKI_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-5|VPS13B;nc|ENSG00000132549|Q7Z7G8-4|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2655334472656	2	437.266876	872.519199	0.46111	0.00020163	-3.2258	-0.0014106	-2.7647	-0.0012089	437.2654513325837	23.967	1.9466	23.969	23.291	25.237	0.0018959					213	95	5	0	0	0	0.89494	1	801	801		37.159	1.5408	1	2561300			23392	3805	15797	15807	26852	26852					0.0778402671146523
KRNFASEC	8	Unmodified	_KRNFASEC_					0	0	0			REV__ENST00000493497.1_1_20:32376535-32379320:+|nuORF	REV__ENST00000493497.1_1_20:32376535-32379320:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.72845458984375	2	477.726726	953.4389	2.0086	0.00095957	1.3518	0.0006458	3.3604	0.0016054	477.7274989934108	97.814	1.9969	98.2	97.32	99.317	0.38548					150	48	5	0	0	0	0.92973	1	11770	11770		50.025	4.0726	1	10503000	+		23393	27694	15798	15808	26853	26853					-0.039682026738887544
KRNFASEC	8	Unmodified	_KRNFASEC_					0	0	0			REV__ENST00000493497.1_1_20:32376535-32379320:+|nuORF	REV__ENST00000493497.1_1_20:32376535-32379320:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.72503662109375	2	477.726726	953.4389	2.1837	0.0010432	-0.12292	-5.8724E-05	2.0608	0.0009845	477.7265645950069	101.48	1.0107	101.78	101.5	102.52	0.29822					62	27	3	0	0	0	0.92457	1	12279	12279		47.916	3.7988	1	4071800	+		23394	27694	15798	15808	26854	26854					-0.039682026738887544
KRNFASEC	8	Unmodified	_KRNFASEC_					0	0	0			REV__ENST00000493497.1_1_20:32376535-32379320:+|nuORF	REV__ENST00000493497.1_1_20:32376535-32379320:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	477.726726	953.4389	-0.8275	-0.00039532	2.2881	0.0010931	1.4606	0.00069776	477.72824447896664	101.46	1.4292	101.66	100.76	102.19	0.2058	-0.050243	0.0019111	NaN	47.916	42	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	194620	+		23395	27694	15798	15808							-0.039682026738887544
KRNFASEC	8	Unmodified	_KRNFASEC_					0	0	0			REV__ENST00000493497.1_1_20:32376535-32379320:+|nuORF	REV__ENST00000493497.1_1_20:32376535-32379320:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	477.726726	953.4389	-1.6875	-0.00080616	3.3848	0.001617	1.6973	0.00081086	477.72878289786973	101.5	1.1615	101.65	100.96	102.12	0.15504	-0.0582	0.002959	NaN	47.916	36	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	220860	+		23396	27694	15798	15808							-0.039682026738887544
KRNFGLFL	8	Unmodified	_KRNFGLFL_					0	0	0		ENST00000410023.5_1_2:102781350-102781467:+|nuORF	ENST00000410023.5_1_2:102781350-102781467:+|nuORF	ENST00000410023.5_1_2:102781350-102781467:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.7956848144531	2	497.795269	993.575986	-0.23858	-0.00011877	1.4256	0.00070966	1.187	0.00059089	497.79577554464987	49.055	0.99467	48.961	48.599	49.594	-0.093178					54	23	3	0	0	0	0.884	1	3741	3741		33.516	1.5607	1	401360			23397	11322	15799	15809	26855	26855					0.0789407426799471
KRNIRNIYG	9	Unmodified	_KRNIRNIYG_					0	0	0		ENSG00000157999|ENST00000409061|ANKRD61	ENSG00000157999|ENST00000409061|ANKRD61	ENSG00000157999|ENST00000409061|ANKRD61	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3306274414062	2	567.330539	1132.64652	1.492	0.00084643	-2.5283	-0.0014344	-1.0363	-0.00058793	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.7932	1	9445	9445		12.959	3.4886	1	5346500			23398	5454	15800	15810	26856	26856					0.0855074758567298
KRNKALQV	8	Unmodified	_KRNKALQV_					0	0	0		nc|ENSG00000188916|Q6ZSG2-2|INSYN2A;ENSG00000188916|ENST00000522781|INSYN2A	nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.80377197265625	2	478.803626	955.592698	-1.2382	-0.00059286	4.3011	0.0020594	3.0629	0.0014665	478.80558529591235	40.624	1.0284	40.581	39.923	40.951	-0.042892					45	26	2	0	0	0	0.85277	1	2971	2971		25.45	0.93098	1	267990			23399	7972	15801	15811	26857	26857					0.11312575153942817
KRNLAIAGG	9	Unmodified	_KRNLAIAGG_					0	0	0		nc|ENSG00000034677|Q9NV58-2|RNF19A;nc|ENSG00000034677|Q9NV58-3|RNF19A;ENSG00000034677|ENST00000341084|RNF19A	nc|ENSG00000034677|Q9NV58-2|RNF19A	nc|ENSG00000034677|Q9NV58-2|RNF19A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.27081298828125	2	450.274701	898.534849	-0.96964	-0.00043661	0.72658	0.00032716	-0.24307	-0.00010945	450.27479117103064	102.58	0.9009	102.58	102.1	103	0					39	22	2	0	0	0	0.7932	1	10482	10482		19.36	1.995	1	131340			23400	895	15802	15812	26858	26858					0.08152313228515595
KRNLAIAGG	9	Unmodified	_KRNLAIAGG_					0	0	0		nc|ENSG00000034677|Q9NV58-2|RNF19A;nc|ENSG00000034677|Q9NV58-3|RNF19A;ENSG00000034677|ENST00000341084|RNF19A	nc|ENSG00000034677|Q9NV58-2|RNF19A	nc|ENSG00000034677|Q9NV58-2|RNF19A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	450.274701	898.534849	1.3282	0.00059806	-1.367	-0.00061555	-0.038847	-1.7492E-05	450.2740167635746	102.2	1.0694	102.24	101.81	102.88	0.043198	-0.095305	-0.00076701	NaN	19.36	42	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171420			23401	895	15802	15812							0.08152313228515595
KRNLAIAGG	9	Unmodified	_KRNLAIAGG_					0	0	0		nc|ENSG00000034677|Q9NV58-2|RNF19A;nc|ENSG00000034677|Q9NV58-3|RNF19A;ENSG00000034677|ENST00000341084|RNF19A	nc|ENSG00000034677|Q9NV58-2|RNF19A	nc|ENSG00000034677|Q9NV58-2|RNF19A	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	450.274701	898.534849	-1.2361	-0.0005566	1.9692	0.0008867	0.73311	0.0003301	450.2751411877604	102.1	1.4324	102.3	101.58	103.02	0.19483	-0.036695	0.0022375	NaN	19.36	64	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299960			23402	895	15802	15812							0.08152313228515595
KRNLAIAGG	9	Unmodified	_KRNLAIAGG_					0	0	0		nc|ENSG00000034677|Q9NV58-2|RNF19A;nc|ENSG00000034677|Q9NV58-3|RNF19A;ENSG00000034677|ENST00000341084|RNF19A	nc|ENSG00000034677|Q9NV58-2|RNF19A	nc|ENSG00000034677|Q9NV58-2|RNF19A	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	450.274701	898.534849	0.75396	0.00033949	0.49822	0.00022433	1.2522	0.00056382	450.2743193877382	102.15	1.1801	102.29	101.8	102.98	0.13523	-0.04617	0.00091275	NaN	19.36	55	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	357030			23403	895	15802	15812							0.08152313228515595
KRNLAIAGG	9	Unmodified	_KRNLAIAGG_					0	0	0		nc|ENSG00000034677|Q9NV58-2|RNF19A;nc|ENSG00000034677|Q9NV58-3|RNF19A;ENSG00000034677|ENST00000341084|RNF19A	nc|ENSG00000034677|Q9NV58-2|RNF19A	nc|ENSG00000034677|Q9NV58-2|RNF19A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	450.274701	898.534849	-1.7764	-0.00079989	2.7585	0.0012421	0.98209	0.00044221	450.2749183471021	102.13	1.3965	102.27	101.59	102.98	0.13569	-0.065715	0.0029483	NaN	19.36	59	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	283140			23404	895	15802	15812							0.08152313228515595
KRNPIAKIHS	10	Unmodified	_KRNPIAKIHS_					0	0	0		ENSG00000134760|ENST00000257192|DSG1	ENSG00000134760|ENST00000257192|DSG1	ENSG00000134760|ENST00000257192|DSG1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3519897460938	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.54	1	119.51	119.01	120.01	-0.024033								0	0	0	0.45132	1	13243	13243		19.997	0.89325	1				23405	3955	15803	15813	26859	26859					0.11863607136797327
KRNQIPGG	8	Unmodified	_KRNQIPGG_					0	0	0			REV__ENSG00000110328|ENST00000227756|GALNT18	REV__ENSG00000110328|ENST00000227756|GALNT18	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2530212402344	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.884	1	7794	7794		33.516	4.366	1	1788100	+		23406	17809	15804	15814	26860	26860					0.04839453677391248
KRNQIPGG	8	Unmodified	_KRNQIPGG_					0	0	0			REV__ENSG00000110328|ENST00000227756|GALNT18	REV__ENSG00000110328|ENST00000227756|GALNT18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2514343261719	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.81548	2	7776	7776;7923		33.516	3.0119	1	2823900	+		23407	17809	15804	15814	26861;26862	26861					0.04839453677391248
KRNQIPGG	8	Unmodified	_KRNQIPGG_					0	0	0			REV__ENSG00000110328|ENST00000227756|GALNT18	REV__ENSG00000110328|ENST00000227756|GALNT18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25146484375	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.86288	4	7881	7881;7938;8458;8469		42.474	7.2737	1	3292300	+		23408	17809	15804	15814	26863;26864;26865;26866	26863					0.04839453677391248
KRNQIPGG	8	Unmodified	_KRNQIPGG_					0	0	0			REV__ENSG00000110328|ENST00000227756|GALNT18	REV__ENSG00000110328|ENST00000227756|GALNT18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2519836425781	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.85277	3	7699	7699;8025;8301		28.254	2.8041	1	3370400	+		23409	17809	15804	15814	26867;26868;26869	26867					0.04839453677391248
KRNQIPGG	8	Unmodified	_KRNQIPGG_					0	0	0			REV__ENSG00000110328|ENST00000227756|GALNT18	REV__ENSG00000110328|ENST00000227756|GALNT18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25140380859375	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.86288	2	7472	7472;7822		33.516	3.0119	1	3322700	+		23410	17809	15804	15814	26870;26871	26870					0.04839453677391248
KRNQIPGG	8	Unmodified	_KRNQIPGG_					0	0	0			REV__ENSG00000110328|ENST00000227756|GALNT18	REV__ENSG00000110328|ENST00000227756|GALNT18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2518310546875	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.88915	1	7794	7794		35.201	7.3185	1	2743300	+		23411	17809	15804	15814	26872	26872					0.04839453677391248
KRNQIPGG	8	Unmodified	_KRNQIPGG_					0	0	0			REV__ENSG00000110328|ENST00000227756|GALNT18	REV__ENSG00000110328|ENST00000227756|GALNT18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2518310546875	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.86791	1	7777	7777		28.254	1.4582	1	2494100	+		23412	17809	15804	15814	26873	26873					0.04839453677391248
KRNQIPGG	8	Unmodified	_KRNQIPGG_					0	0	0			REV__ENSG00000110328|ENST00000227756|GALNT18	REV__ENSG00000110328|ENST00000227756|GALNT18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2511901855469	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.86288	1	9263	9263		26.796	1.3459	1	2235800	+		23413	17809	15804	15814	26874	26874					0.04839453677391248
KRNRFVRSFVR	11	Unmodified	_KRNRFVRSFVR_					0	0	0		ENST00000507035.2_1_5:134374548-134375597:-|nuORF	ENST00000507035.2_1_5:134374548-134375597:-|nuORF	ENST00000507035.2_1_5:134374548-134375597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.2994384765625	3	488.960138	1463.85858	0.73479	0.00035929	3.9345	0.0019238	4.6693	0.0022831	488.962037830155	16.572	0.58602	16.548	16.396	16.982	-0.024035					71	25	5	0	0	0	0.78083	1	170	170		15.337	1.8295	1	1499000			23414	12950	15805	15815	26875	26875					0.14520838996440943
KRNRTQIGEK	10	Unmodified	_KRNRTQIGEK_					0	0	0			REV__nc|ENSG00000179348|P23769-2|GATA2;REV__nc|ENSG00000107485|P23771|GATA3	REV__nc|ENSG00000107485|P23771|GATA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.3577270507812	2	615.357285	1228.70002	-0.35839	-0.00022054	0.56187	0.00034575	0.20348	0.00012521	615.3576084899992	104.75	2.3818	104.73	104.28	106.66	-0.014809					147	56	4	0	0	0	0.86348	1	11382	11382		31.53	3.4483	1	1933000	+		23415	30066;17659	15806	15816	26876	26876					0.09481500297511047
KRNVMILTNP	10	Unmodified	_KRNVMILTNP_					0	0	0		ENST00000485009.1_1_7:115863047-115889401:+|nuORF;ENST00000461440.5_1_7:115850593-115889401:+|nuORF;nc|ENSG00000135269|Q9UGI8-2|TES;ENSG00000135269|ENST00000358204|TES	ENST00000485009.1_1_7:115863047-115889401:+|nuORF	ENST00000485009.1_1_7:115863047-115889401:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.3446044921875	2	593.342258	1184.66996	-0.64573	-0.00038314	4.3217	0.0025643	3.676	0.0021811	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.85466	1	11295	11295		20.947	0	1	2296600			23416	3998	15807	15817	26877	26877					0.0850142530798621
KRPAVFVSE	9	Unmodified	_KRPAVFVSE_					0	0	0			REV__ENSG00000054803|ENST00000064571|CBLN4	REV__ENSG00000054803|ENST00000064571|CBLN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.793212890625	2	516.795466	1031.57638	-1.5008	-0.00077558	-2.6662	-0.0013779	-4.167	-0.0021535	516.7939962444509	86.285	2.6644	86.444	84.762	87.426	0.15851					129	61	3	0	0	0	0.74721	1	8509	8509		37.159	3.6435	1	241060	+		23417	16406	15808	15818	26878	26878					0.06185449197187154
KRPGIVRKGPK	11	Unmodified	_KRPGIVRKGPK_					0	0	0			REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.266357421875	3	412.606813	1234.79861	-1.0698	-0.00044142	2.4745	0.001021	1.4047	0.00057959	412.6077842879134	64.181	0.50191	64.211	64.044	64.546	0.030243					25	19	2	0	0	0	0.17835	1	5678	5678		16.53	10.209	1	66181	+		23418	20560	15809	15819	26879	26879					0.19060148333232974
KRPGIVRKGPK	11	Unmodified	_KRPGIVRKGPK_					0	0	0			REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2676696777344	3	412.606813	1234.79861	-0.4378	-0.00018064	2.2355	0.00092238	1.7977	0.00074174	412.6077039605143	46.375	0.96605	46.296	45.977	46.943	-0.079002					42	25	2	0	0	0	0.17996	1	3472	3472		12.433	8.5894	1	250010	+		23419	20560	15809	15819	26880	26880					0.19060148333232974
KRPGIVRKGPK	11	Unmodified	_KRPGIVRKGPK_					0	0	0			REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	412.606813	1234.79861	0.24408	0.00010071	1.4798	0.00061058	1.7239	0.00071129	412.60735267236583	46.497	0.93798	46.535	45.984	46.922	0.038181	0.11953	-0.00051049	NaN	12.433	43	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	168630	+		23420	20560	15809	15819							0.19060148333232974
KRPGKAAN	8	Unmodified	_KRPGKAAN_					0	0	0		ENSG00000138002|ENST00000260570|IFT172	ENSG00000138002|ENST00000260570|IFT172	ENSG00000138002|ENST00000260570|IFT172	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.25396728515625	2	421.253769	840.492984	2.7224	0.0011468	-2.0799	-0.00087617	0.6425	0.00027065	421.25268060933485	84.188	1.829	84.247	83.761	85.59	0.059258					100	41	4	0	0	0	0.85277	1	8529	8529		25.45	4.9683	1	871350			23421	4253	15810	15820	26881	26881					0.06635757539970655
KRPHFLSSSF	10	Unmodified	_KRPHFLSSSF_					0	0	0			REV__ENST00000572259.1_1_17:578096-579572:-|nuORF	REV__ENST00000572259.1_1_17:578096-579572:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	603.3214721679688	2	603.324922	1204.63529	-1.2786	-0.00077144	-3.0867	-0.0018623	-4.3653	-0.0026337	603.322865407731	97.893	2.0817	98.089	97.002	99.084	0.19585					81	47	2	0	0	0	0.80179	1	10115	10115		39.253	10.083	1	72332	+		23422	28945	15811	15821	26882	26882					0.04115925491510097
KRPIPYYR	8	Unmodified	_KRPIPYYR_					0	0	0		ENSG00000177679|ENST00000611745|SRRM3;ENSG00000139767|ENST00000267260|SRRM4	ENSG00000177679|ENST00000611745|SRRM3	ENSG00000177679|ENST00000611745|SRRM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8153076171875	2	546.819276	1091.624	0.39221	0.00021447	-4.2098	-0.002302	-3.8176	-0.0020875	546.8168814087436	16.218	0.31952	16.138	16.036	16.356	-0.080019					24	12	3	0	0	0	0.90465	1	90	90		40.573	1.7665	1	141060			23423	7154	15812	15822	26883	26883					0.08185148187999403
KRPLATLFPIP	11	Unmodified	_KRPLATLFPIP_					0	0	0		ENSG00000165282|ENST00000378617|PIGO;ENST00000465745.6_1_9:35090240-35092764:-|nuORF;ENST00000474436.1_1_9:35090976-35092764:-|nuORF	ENSG00000165282|ENST00000378617|PIGO	ENSG00000165282|ENST00000378617|PIGO	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.26605224609375	3	418.264053	1251.77033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.524	1	49.567	49.067	50.067	0.042236								0	0	0	0.56276	1	3840	3840		35.178	7.5343	1				23424	6067	15813	15823	26884	26884					0.15451405633280046
KRPLGPRGRVC	11	Unmodified	_KRPLGPRGRVC_					0	0	0			REV__ENST00000573456.5_1_15:74488585-74490170:-|nuORF	REV__ENST00000573456.5_1_15:74488585-74490170:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8698120117188	2	619.866766	1237.71898	1.7162	0.0010638	2.8407	0.0017608	4.5568	0.0028246	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.64498	1	11377	11377		39.253	6.5023	1	4719500	+		23425	28960	15814	15824	26885	26885					0.10962758387586291
KRPLGPRGRVC	11	Unmodified	_KRPLGPRGRVC_					0	0	0			REV__ENST00000573456.5_1_15:74488585-74490170:-|nuORF	REV__ENST00000573456.5_1_15:74488585-74490170:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8690185546875	2	619.866766	1237.71898	0.5439	0.00033715	3.6463	0.0022602	4.1902	0.0025974	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.7342	1	11202	11202		25.574	0	1	1280900	+		23426	28960	15814	15824	26886	26886					0.10962758387586291
KRPLRRPSA	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KRPLRRPSA_					1	0	0			REV__chr6:7289931-7298747|35|10.34|0.39|4.72|-|2|SSR1,SSR1|2	REV__chr6:7289931-7298747|35|10.34|0.39|4.72|-|2|SSR1,SSR1|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.8458862304688	2	561.846356	1121.67816	1.1758	0.00066063	-2.0731	-0.0011648	-0.89731	-0.00050415	561.8450264684539	96.692	1.5682	97.097	96.665	98.233	0.40451					88	37	3	0	0	0	0.67345	1	11636	11636		42.396	10.441	1	1298100	+		23427	15891	15815	15825	26887	26887					0.12218740339608303
KRPLVRLIG	9	Unmodified	_KRPLVRLIG_					0	0	0			REV__ENST00000338272.8_1_1:109637645-109637765:+|nuORF	REV__ENST00000338272.8_1_1:109637645-109637765:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3611450195312	2	526.358568	1050.70258	1.3753	0.00072391	3.8587	0.002031	5.234	0.0027549	526.3604424502926	34.187	1.5135	34.492	34.159	35.672	0.30494					130	37	5	0	0	0	0.74721	1	2594	2594		37.159	8.0096	1	5570700	+		23428	25216	15816	15826	26888	26888					0.1792600049311659
KRPPAFKREPK	11	Unmodified	_KRPPAFKREPK_					0	0	0			REV__ENSG00000234602|ENST00000513312|MCIDAS	REV__ENSG00000234602|ENST00000513312|MCIDAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9429016113281	3	451.941973	1352.80409	-0.06697	-3.0266E-05	2.8157	0.0012725	2.7487	0.0012423	451.9431207678107	53.546	2.822	53.541	51.391	54.213	-0.0053711					204	73	4	0	0	0	0.78083	1	4704	4704		15.337	1.2515	1	724120	+		23429	23779	15817	15827	26889	26889					0.1417982712500816
KRPPAFKREPK	11	Unmodified	_KRPPAFKREPK_					0	0	0			REV__ENSG00000234602|ENST00000513312|MCIDAS	REV__ENSG00000234602|ENST00000513312|MCIDAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.94305419921875	3	451.941973	1352.80409	0.2172	9.8162E-05	2.4446	0.0011048	2.6618	0.001203	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.75779	1	4697	4697		20.315	1.784	1	771970	+		23430	23779	15817	15827	26890	26890					0.1417982712500816
KRPRRRRRRRE	11	Unmodified	_KRPRRRRRRRE_					0	0	0		ENST00000367590.8_1_1:180601192-180601402:+|nuORF	ENST00000367590.8_1_1:180601192-180601402:+|nuORF	ENST00000367590.8_1_1:180601192-180601402:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.24847412109375	4	406.25972	1621.00977	-1.8134	-0.00073672	-2.7656	-0.0011236	-4.579	-0.0018603	406.25861694177433	88.198	0.15809	88.399	88.267	88.425	0.20115					5	3	2	0	0	0	0.1842	1	8728	8728		0.37141	0	1	666980			23431	10559	15818	15828	26891	26891					0.2241083814767535
KRPSCASSSRS	11	Unmodified	_KRPSCASSSRS_					0	0	0			REV__ENST00000474511.1_1_1:16270449-16270866:-|nuORF	REV__ENST00000474511.1_1_1:16270449-16270866:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.2933959960938	2	583.290753	1164.56695	-0.8044	-0.0004692	1.7156	0.0010007	0.91117	0.00053147	583.2916759756378	75.943	1.3305	76.339	75.784	77.114	0.39507					52	33	2	0	0	0	0.638	1	8628	8628		40.058	3.6114	1	1046400	+		23432	27306	15819	15829	26892	26892					-0.008746871506446041
KRPSGELAAS	10	Unmodified	_KRPSGELAAS_					0	0	0		ENSG00000274211|ENST00000612932|SOCS7;nc|ENSG00000274211|O14512|SOCS7	ENSG00000274211|ENST00000612932|SOCS7	ENSG00000274211|ENST00000612932|SOCS7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2796325683594	2	508.28018	1014.54581	0.22565	0.0001147	-0.11322	-5.7546E-05	0.11244	5.715E-05	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.73395	1	9237	9237		42.864	5.0528	1	1820400			23433	8993	15820	15830	26893	26893					0.03911670812135526
KRPSKHPG	8	Unmodified	_KRPSKHPG_					0	0	0			REV__ENST00000608501.5_1_2:91816838-91843483:-|nuORF	REV__ENST00000608501.5_1_2:91816838-91843483:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.765869140625	2	453.767043	905.519533	-0.13114	-5.9507E-05	-2.4763	-0.0011237	-2.6075	-0.0011832	453.7659298914551	41.976	1.7233	41.931	41.177	42.9	-0.045471					104	47	4	0	0	0	0.90465	1	2809	2809		40.573	7.057	1	768160	+		23434	29397	15821	15831	26894	26894					0.0629944643133058
KRPVDAKSD	9	Unmodified	_KRPVDAKSD_					0	0	0		ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA	ENSG00000011007|ENST00000613537|ELOA	ENSG00000011007|ENST00000613537|ELOA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2798767089844	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.44421	1	8852	8852		54.776	21.964	1	1954800			23435	776	15822	15832	26895	26895					0.03911670812135526
KRPVDAKSD	9	Unmodified	_KRPVDAKSD_					0	0	0		ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA	ENSG00000011007|ENST00000613537|ELOA	ENSG00000011007|ENST00000613537|ELOA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.27978515625	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.77244	1	8692	8692		32.812	0.85756	1	1814000			23436	776	15822	15832	26896	26896					0.03911670812135526
KRQAVTNP	8	Unmodified	_KRQAVTNP_					0	0	0		ENST00000507097.5_1_5:137893182-137909502:-|nuORF;ENSG00000113013|ENST00000297185|HSPA9;ENST00000506477.5_1_5:137906647-137911007:-|nuORF	ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENST00000507097.5_1_5:137893182-137909502:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2637023925781	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.87064	1	7803	7803		29.15	0	1	1458600			23437	2694	15823	15833	26897	26897					0.05435722848858404
KRQFEMKRK	9	Unmodified	_KRQFEMKRK_					0	0	0		ENSG00000184203|ENST00000618156|PPP1R2	ENSG00000184203|ENST00000618156|PPP1R2	ENSG00000184203|ENST00000618156|PPP1R2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.5755920410156	3	417.576525	1249.70774	1.3349	0.00055741	-3.7322	-0.0015585	-2.3974	-0.0010011	417.5749239051732	21.566	1.4264	21.123	20.825	22.251	-0.44324					86	32	4	0	0	0	0.15708	1	799	799		82.75	27.029	1	1107100			23438	7588	15824	15834	26898	26898					0.0928793629343545
KRQFEMKRK	9	Unmodified	_KRQFEMKRK_					0	0	0		ENSG00000184203|ENST00000618156|PPP1R2	ENSG00000184203|ENST00000618156|PPP1R2	ENSG00000184203|ENST00000618156|PPP1R2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	417.576525	1249.70774	-0.39385	-0.00016446	-2.883	-0.0012039	-3.2768	-0.0013683	417.5752180107267	20.82	0.30842	20.755	20.632	20.94	-0.064743	-0.25922	0.00022676	NaN	82.75	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22497			23439	7588	15824	15834							0.0928793629343545
KRQGALPN	8	Unmodified	_KRQGALPN_					0	0	0			REV__ENSG00000121440|ENST00000263666|PDZRN3	REV__ENSG00000121440|ENST00000263666|PDZRN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2586975097656	2	442.259051	882.503549	0.83061	0.00036735	-0.7766	-0.00034346	0.054011	2.3887E-05	442.2587586323761	85.526	1.7733	85.453	84.54	86.314	-0.072899					97	40	3	0	0	0	0.85277	1	8786	8786		25.45	3.4903	1	195110	+		23440	18455	15825	15835	26899	26899					0.057597401944121884
KRQGALPN	8	Unmodified	_KRQGALPN_					0	0	0			REV__ENSG00000121440|ENST00000263666|PDZRN3	REV__ENSG00000121440|ENST00000263666|PDZRN3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	442.259051	882.503549	-1.2142	-0.000537	1.9429	0.00085926	0.72865	0.00032225	442.2598370167717	85.725	1.4635	85.725	85.14	86.604	0	0.16676	0.0012807	NaN	25.45	52	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105550	+		23441	18455	15825	15835							0.057597401944121884
KRQGALPN	8	Unmodified	_KRQGALPN_					0	0	0			REV__ENSG00000121440|ENST00000263666|PDZRN3	REV__ENSG00000121440|ENST00000263666|PDZRN3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	442.259051	882.503549	-0.15372	-6.7983E-05	0.33597	0.00014859	0.18226	8.0604E-05	442.2592464410641	85.57	2.2036	85.638	84.291	86.494	0.067261	0.079723	-0.0001406	NaN	25.45	106	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	166530	+		23442	18455	15825	15835							0.057597401944121884
KRQGALPN	8	Unmodified	_KRQGALPN_					0	0	0			REV__ENSG00000121440|ENST00000263666|PDZRN3	REV__ENSG00000121440|ENST00000263666|PDZRN3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	442.259051	882.503549	0.83061	0.00036735	-0.7766	-0.00034346	0.054011	2.3887E-05	442.2587586323761	85.526	1.7733	85.453	84.54	86.314	-0.072899	-0.10503	-0.0011247	NaN	25.45	97	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	195110	+		23443	18455	15825	15835							0.057597401944121884
KRQGALPN	8	Unmodified	_KRQGALPN_					0	0	0			REV__ENSG00000121440|ENST00000263666|PDZRN3	REV__ENSG00000121440|ENST00000263666|PDZRN3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	442.259051	882.503549	1.5365	0.00067954	-1.3626	-0.0006026	0.17396	7.6934E-05	442.2584721634789	85.456	1.7671	85.514	84.674	86.441	0.057899	-0.04373	-0.001643	NaN	25.45	97	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	168480	+		23444	18455	15825	15835							0.057597401944121884
KRQGALPN	8	Unmodified	_KRQGALPN_					0	0	0			REV__ENSG00000121440|ENST00000263666|PDZRN3	REV__ENSG00000121440|ENST00000263666|PDZRN3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	442.259051	882.503549	-1.4117	-0.00062432	1.6757	0.00074111	0.26408	0.00011679	442.2598285203262	85.237	2.1725	85.423	84.497	86.67	0.18523	-0.13524	0.0010445	NaN	25.45	106	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	145770	+		23445	18455	15825	15835							0.057597401944121884
KRQGALPN	8	Unmodified	_KRQGALPN_					0	0	0			REV__ENSG00000121440|ENST00000263666|PDZRN3	REV__ENSG00000121440|ENST00000263666|PDZRN3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	442.259051	882.503549	0.60612	0.00026806	-0.071877	-3.1788E-05	0.53424	0.00023627	442.258936648392	85.377	1.9264	85.525	84.474	86.401	0.14857	-0.032472	-0.00050135	NaN	25.45	95	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121760	+		23446	18455	15825	15835							0.057597401944121884
KRQGALPN	8	Unmodified	_KRQGALPN_					0	0	0			REV__ENSG00000121440|ENST00000263666|PDZRN3	REV__ENSG00000121440|ENST00000263666|PDZRN3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	442.259051	882.503549	-1.7117	-0.00075699	1.9298	0.00085348	0.21816	9.6482E-05	442.2599695681003	85.469	1.6739	85.628	84.675	86.349	0.15851	0.069987	0.0012692	NaN	25.45	87	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125390	+		23447	18455	15825	15835							0.057597401944121884
KRQGGGRKP	9	Unmodified	_KRQGGGRKP_					0	0	0		ENST00000534624.5_1_11:122931950-122932924:-|nuORF	ENST00000534624.5_1_11:122931950-122932924:-|nuORF	ENST00000534624.5_1_11:122931950-122932924:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.2962341308594	2	492.296499	982.578445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.17	1	65.135	64.635	65.635	-0.034798								0	0	0	0.30778	1	6247	6247		27.882	1.1893	1				23448	13412	15826	15836	26900	26900					0.08645922725656874
KRQGPEKKSPK	11	Unmodified	_KRQGPEKKSPK_					0	0	0		L1M4a2_dup1294|chr10:27107699-27108484:+|1.0709832296951889|0.3965450552821637|1.43|63.0|6|1|sense	L1M4a2_dup1294|chr10:27107699-27108484:+|1.0709832296951889|0.3965450552821637|1.43|63.0|6|1|sense	L1M4a2_dup1294|chr10:27107699-27108484:+|1.0709832296951889|0.3965450552821637|1.43|63.0|6|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8822631835938	2	641.883136	1281.75172	-0.050098	-3.2157E-05	-0.96956	-0.00062234	-1.0197	-0.0006545	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.67041	1	10445	10445		36.318	2.396	1	3644700			23449	14522	15827	15837	26901	26901					0.12211243991396259
KRQIEGRAR	9	Unmodified	_KRQIEGRAR_					0	0	0		ENST00000393452.7_1_14:90422295-90422971:+|nuORF;ENST00000553569.1_1_14:90422543-90422971:+|nuORF	ENST00000393452.7_1_14:90422295-90422971:+|nuORF	ENST00000393452.7_1_14:90422295-90422971:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	557.3357543945312	2	557.333613	1112.65267	0.12888	7.1829E-05	3.3396	0.0018613	3.4685	0.0019331	557.3354509359302	18.275	0.53683	17.654	17.447	17.983	-0.62141					22	11	3	0	0	0	0.41566	1	366	366		56.721	6.6965	1	356770			23450	11048	15828	15838	26902	26902					0.10085265817156142
KRQIIHALAAS	11	Unmodified	_KRQIIHALAAS_					0	0	0			REV__ENSG00000164125|ENST00000585682|GASK1B	REV__ENSG00000164125|ENST00000585682|GASK1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3663330078125	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.72918	1	11670	11670		26.693	2.4902	1	64334000	+		23451	21037	15829	15839	26903	26903					0.12459876308275852
KRQIKSTSVF	10	Unmodified	_KRQIKSTSVF_					0	0	0		ENST00000455785.6_1_1:26226745-26227000:-|nuORF	ENST00000455785.6_1_1:26226745-26227000:-|nuORF	ENST00000455785.6_1_1:26226745-26227000:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8558349609375	2	597.35368	1192.69281	2.4166	0.0014436	0.49195	0.00029387	2.9086	0.0017374	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.86218	1	10114	10114		32.812	1.2826	1	8047600			23452	11957	15830	15840	26904	26904					0.10416767697074647
KRQLLRREREF	11	Unmodified	_KRQLLRREREF_					0	0	0			REV__ENSG00000099795|ENST00000215565|NDUFB7	REV__ENSG00000099795|ENST00000215565|NDUFB7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.79583740234375	3	510.970702	1529.89028	2.8956	0.0014795	-4.1806	-0.0021361	-1.285	-0.00065659	511.30242199841547	26.209	0.74472	25.868	25.487	26.232	-0.34035					30	16	3	0	0	0	0.18034	1	1449	1449		16.53	7.7305	1	175940	+		23453	17102	15831	15841	26905	26905					0.14652786959732111
KRQLNKLN	8	Unmodified	_KRQLNKLN_					0	0	0			REV__ENST00000474234.5_1_2:112995906-112996044:-|nuORF	REV__ENST00000474234.5_1_2:112995906-112996044:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.3126525878906	2	507.314358	1012.61416	-0.697	-0.0003536	-3.3245	-0.0016866	-4.0215	-0.0020402	507.31252828553215	63.172	2.1467	63.559	62.968	65.115	0.38779					115	49	4	0	0	0	0.84634	1	6831	6831		60.294	3.5729	1	2688300	+		23454	27296	15832	15842	26906	26906					0.108359601826578
KRQNVPTVLQ	10	Unmodified	_KRQNVPTVLQ_					0	0	0		nc|ENSG00000079691|Q5VZK9-4|CARMIL1	nc|ENSG00000079691|Q5VZK9-4|CARMIL1	nc|ENSG00000079691|Q5VZK9-4|CARMIL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.8539428710938	2	591.851304	1181.68806	-1.1163	-0.00066066	3.9223	0.0023214	2.8061	0.0016608	591.8535674862683	60.822	0.56529	61.212	60.859	61.424	0.38945					41	15	3	0	0	0	0.010137	1	6476	6476		131.62	27.603	1	1472700			23455	14788	15833	15843	26907	26907					0.1044788355432047
KRQQELRKR	9	Unmodified	_KRQQELRKR_					0	0	0			REV__ENSG00000164080|ENST00000684192|RAD54L2	REV__ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.5911865234375	3	414.589822	1240.74764	0.21654	8.9776E-05	2.988	0.0012388	3.2045	0.0013286	414.5911015658191	18.275	1.4533	17.654	17.447	18.9	-0.62141					70	32	3	0	0	0	0.26953	1	359	359		67.494	2.3364	1	4091800	+		23456	21027	15834	15844	26908	26908					0.13689199288364762
KRQTVITTMTT	11	Unmodified	_KRQTVITTMTT_					0	0	0		ENST00000529955.5_1_11:66281964-66299243:+|nuORF;ENSG00000174483|ENST00000318312|BBS1;nc|ENSG00000174483|Q8NFJ9-2|BBS1;ENST00000528543.1_1_11:66283182-66287297:+|nuORF;ENST00000529953.5_1_11:66282092-66287879:+|nuORF;ENST00000533557.5_1_11:66281964-66290643:+|nuORF;nc|ENSG00000174483|Q8NFJ9-3|BBS1	ENST00000529955.5_1_11:66281964-66299243:+|nuORF	ENST00000529955.5_1_11:66281964-66299243:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3590698242188	2	640.355562	1278.69657	2.419	0.001549	2.6986	0.0017281	5.1176	0.0032771	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.74763	1	10823	10823		22.58	0.89391	1	625580			23457	6938	15835	15845	26909	26909					0.06837069408607022
KRRALAAPV	9	Unmodified	_KRRALAAPV_					0	0	0		nc|ENSG00000260727|Q8MH63|SLC7A5P1;nc|ENSG00000258186|Q9GIP4-1|SLC7A5P2;nc|ENSG00000258186|Q9GIP4|SLC7A5P2;ENST00000522841.6_1_16:21495824-21531728:-|nuORF	nc|ENSG00000260727|Q8MH63|SLC7A5P1	nc|ENSG00000260727|Q8MH63|SLC7A5P1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.8044128417969	2	491.319443	980.624333	-0.69672	-0.00034231	-2.0011	-0.00098318	-2.6978	-0.0013255	491.3170490749256	62.94	0.30102	63.054	62.818	63.119	0.11388					19	15	2	0	0	0	0.7932	1	5482	5482		24.203	0	1	80026			23458	13193	15836	15846	26910	26910					0.13324567907875462
KRRDIETA	8	Unmodified	_KRRDIETA_					0	0	0			REV__ENSG00000113318|ENST00000265081|MSH3	REV__ENSG00000113318|ENST00000265081|MSH3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7817687988281	2	494.780348	987.546142	-0.98597	-0.00048784	1.2423	0.00061469	0.25638	0.00012685	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.87479	1	8130	8130		30.504	0.6621	1	385180	+		23459	17990	15837	15847	26911	26911					0.05187090532001548
KRRDKDKQLLW	11	Unmodified	_KRRDKDKQLLW_					0	0	0			REV__ENSG00000075223|ENST00000265361|SEMA3C	REV__ENSG00000075223|ENST00000265361|SEMA3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.95855712890625	3	495.959803	1484.85758	-0.071833	-3.5626E-05	-0.078377	-3.8872E-05	-0.15021	-7.4498E-05	495.9587251016536	103.95	2.0706	103.95	103.22	105.29	-0.0035706					133	49	4	0	0	0	0.7896	1	11203	11203		13.508	1.0751	1	766140	+		23460	16705	15838	15848	26912	26912					0.13454579836889025
KRREQRLRLRL	11	Unmodified	_KRREQRLRLRL_					0	0	0		ENST00000471073.1_1_22:21354171-21355180:-|nuORF;ENSG00000184436|ENST00000215742|THAP7	ENST00000471073.1_1_22:21354171-21355180:-|nuORF	ENST00000471073.1_1_22:21354171-21355180:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.3225402832031	3	508.662092	1522.96445	-0.51784	-0.0002634	3.5537	0.0018076	3.0359	0.0015442	508.664817340143	19.592	0.17332	19.636	19.53	19.704	0.043747					11	8	2	0	0	0	0.1838	1	427	427		6.001	2.9751	1	64500			23461	7612	15839	15849	26913	26913					0.22388174841921682
KRREQRLRLRL	11	Unmodified	_KRREQRLRLRL_					0	0	0		ENST00000471073.1_1_22:21354171-21355180:-|nuORF;ENSG00000184436|ENST00000215742|THAP7	ENST00000471073.1_1_22:21354171-21355180:-|nuORF	ENST00000471073.1_1_22:21354171-21355180:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	508.662092	1522.96445	0.090031	4.5795E-05	2.8923	0.0014712	2.9823	0.001517	508.99719350000856	19.395	0.15585	19.466	19.41	19.566	0.070713	-0.085075	-0.00046555	NaN	6.001	17	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52811			23462	7612	15839	15849							0.22388174841921682
KRRERRRGPPG	11	Unmodified	_KRRERRRGPPG_					0	0	0			REV__ENST00000381241.8_1_X:1742159-1746637:+|nuORF	REV__ENST00000381241.8_1_X:1742159-1746637:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6086730957031	3	455.607987	1363.80213	-0.55129	-0.00025117	1.5527	0.00070741	1.0014	0.00045624	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.75121	1	6981	6981		21.78	0.74819	1	1732400	+		23463	25962	15840	15850	26914	26914					0.13478211159781495
KRRGRILGGP	10	Unmodified	_KRRGRILGGP_					0	0	0			REV__nc|ENSG00000186493|Q86SI9-2|IRX2-DT	REV__nc|ENSG00000186493|Q86SI9-2|IRX2-DT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3534545898438	2	555.354348	1108.69414	0.85673	0.00047579	-2.8194	-0.0015658	-1.9627	-0.00109	555.3526695275054	100.86	2.5278	101	100.46	102.99	0.14352					194	61	5	0	0	0	0.85694	1	10527	10527		21.96	4.5949	1	5097700	+		23464	30108	15841	15851	26915	26915					0.14414446576529372
KRRGRKPKT	9	Unmodified	_KRRGRKPKT_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.874267578125	2	563.867623	1125.72069	0.14373	8.1047E-05	2.2287	0.0012567	2.3725	0.0013378	563.8689213355182	15.551	0.40457	15.609	15.469	15.873	0.057872					16	11	3	0	0	0	0.51307	1	43	43		51.335	1.7994	1	158280			23465	2924	15842	15852	26916	26916					0.16286135467839813
KRRGRVFYAL	10	Unmodified	_KRRGRVFYAL_					0	0	0		ENST00000397305.3_1_22:36232377-36232464:-|nuORF	ENST00000397305.3_1_22:36232377-36232464:-|nuORF	ENST00000397305.3_1_22:36232377-36232464:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5924377441406	3	422.591163	1264.75166	0.27263	0.00011521	3.3116	0.0013995	3.5843	0.0015147	422.5924825344156	49.575	1.8502	49.617	48.754	50.604	0.04224					166	47	4	0	0	0	0.86587	1	3854	3854		29.17	4.0441	1	2165700			23466	11144	15843	15853	26917	26917					0.12987288782119322
KRRHTLYYYWL	11	Unmodified	_KRRHTLYYYWL_					0	0	0			REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.96142578125	3	533.624532	1597.85177	0.4006	0.00021377	3.4021	0.0018154	3.8027	0.0020292	533.6263084116515	69.139	0.54227	69.523	69.266	69.808	0.38416					31	12	3	0	0	0	0.85439	1	7629	7629		5.6988	2.0797	1	377990	+		23467	22662	15844	15854	26918	26918					0.07675481325236433
KRRHTLYYYWL	11	Unmodified	_KRRHTLYYYWL_					0	0	0			REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	533.624532	1597.85177	0.4006	0.00021377	3.4021	0.0018154	3.8027	0.0020292	533.6263084116515	69.139	0.54227	69.523	69.266	69.808	0.38416	-0.055671	-0.00084693	NaN	5.6988	31	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	377990	+		23468	22662	15844	15854							0.07675481325236433
KRRHTLYYYWL	11	Unmodified	_KRRHTLYYYWL_					0	0	0			REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	533.624532	1597.85177	-0.4393	-0.00023442	4.0865	0.0021807	3.6472	0.0019463	533.9609587080887	69.088	0.54498	69.635	69.282	69.827	0.54693	0.055671	0.00024876	NaN	5.6988	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	355240	+		23469	22662	15844	15854							0.07675481325236433
KRRIHVTLN	9	Unmodified	_KRRIHVTLN_					0	0	0			REV__nc|ENSG00000215421|Q9C0G0-3|ZNF407	REV__nc|ENSG00000215421|Q9C0G0-3|ZNF407	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8538208007812	2	568.854181	1135.69381	0.52259	0.00029728	-2.4856	-0.0014139	-1.963	-0.0011166	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.78058	1	10824	10824		30.504	1.3541	1	84800000	+		23470	23684	15845	15855	26919	26919					0.13139026856674718
KRRIKPKKVP	10	Unmodified	_KRRIKPKKVP_					0	0	0			REV__ENSG00000137413|ENST00000372977|TAF8	REV__ENSG00000137413|ENST00000372977|TAF8	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	625.4259643554688	2	625.432599	1248.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.05	1	109.07	108.57	109.57	0.020561								0	0	0	0.45132	1	11644	11644		6.7355	3.3255	1		+		23471	19383	15846	15856	26920	26920					0.23617311746966152
KRRIRNKKLKS	11	Unmodified	_KRRIRNKKLKS_					0	0	0		ENSG00000173769|ENST00000309765|TOPAZ1	ENSG00000173769|ENST00000309765|TOPAZ1	ENSG00000173769|ENST00000309765|TOPAZ1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.31829833984375	3	476.319554	1425.93683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.391	1	48.391	47.891	48.891	0								0	0	0	0.56276	1	3753	3753		8.7993	2.4784	1				23472	6885	15847	15857	26921	26921					0.24090271581690104
KRRKDRRDRML	11	Unmodified	_KRRKDRRDRML_					0	0	0		ENSG00000198756|ENST00000361927|COLGALT2	ENSG00000198756|ENST00000361927|COLGALT2	ENSG00000198756|ENST00000361927|COLGALT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.9681091308594	3	510.635437	1528.88448	4.1352	0.0021116	-4.4188	-0.0022564	-0.28362	-0.00014482	510.96644639342924	104.18	2.2061	104.41	103.8	106.01	0.22783					165	53	5	0	0	0	0.77803	1	12783	12783		15.921	4.466	1	454800			23473	8324	15848	15858	26922	26922					0.1411936517642971
KRRKGLVP	8	Unmodified	_KRRKGLVP_					0	0	0		ENSG00000135093|ENST00000257548|USP30	ENSG00000135093|ENST00000257548|USP30	ENSG00000135093|ENST00000257548|USP30	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.3223571777344	2	477.321986	952.629418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.8	1	108.93	108.43	109.43	0.13026								0	0	0	0.30674	1	11717	11717		15.636	0.97212	1				23474	3982	15849	15859	26923	26923					0.1512087177052308
KRRKKSRRK	9	Unmodified	_KRRKKSRRK_					0	0	0			REV__ENSG00000130749|ENST00000253048|ZC3H4	REV__ENSG00000130749|ENST00000253048|ZC3H4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3925170898438	2	621.920721	1241.82689	-1.2182	-0.0007576	1.0909	0.00067848	-0.12723	-7.9127E-05	621.9214730380132	104.49	0.11517	104.58	104.52	104.63	0.093857					4	2	2	0	0	0	0.20789	1	11030	11030		21.96	0	1	67350	+		23475	18901	15850	15860	26924	26924					0.215648910331538
KRRKLEERFNY	11	Unmodified	_KRRKLEERFNY_					0	0	0			REV__ENSG00000029639|ENST00000367166|TFB1M	REV__ENSG00000029639|ENST00000367166|TFB1M	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.31591796875	3	513.623191	1537.84774	-1.8309	-0.0009404	-0.91609	-0.00047052	-2.747	-0.0014109	513.6226038173158	41.637	0.4515	42.051	41.823	42.274	0.4139					35	11	4	0	0	0	0.17996	1	3689	3689		17.167	3.0807	1	2391200	+		23476	16270	15851	15861	26925	26925					0.10033391831507288
KRRKNRSS	8	Unmodified	_KRRKNRSS_					0	0	0		ENST00000312037.5_1_5:149826506-149829126:-|nuORF;ENST00000407193.5_1_5:149826506-149829126:-|nuORF	ENST00000312037.5_1_5:149826506-149829126:-|nuORF	ENST00000312037.5_1_5:149826506-149829126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3138427734375	2	516.312681	1030.61081	0.876	0.00045229	1.2864	0.00066417	2.1624	0.0011165	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.84341	1	10950	10950		24.203	2.2429	1	67025000			23477	9936	15852	15862	26926	26926					0.09672710128643303
KRRKNRSS	8	Unmodified	_KRRKNRSS_					0	0	0		ENST00000312037.5_1_5:149826506-149829126:-|nuORF;ENST00000407193.5_1_5:149826506-149829126:-|nuORF	ENST00000312037.5_1_5:149826506-149829126:-|nuORF	ENST00000312037.5_1_5:149826506-149829126:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3148803710938	2	516.312681	1030.61081	1.9037	0.0009829	0.66737	0.00034457	2.5711	0.0013275	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.9283	1	12054	12054		49.442	13.823	1	22616000			23478	9936	15852	15862	26927	26927					0.09672710128643303
KRRKRGRELHW	11	Unmodified	_KRRKRGRELHW_					0	0	0			REV__ENST00000312037.5_1_5:149826506-149829126:-|nuORF	REV__ENST00000312037.5_1_5:149826506-149829126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	507.96917724609375	3	507.971037	1520.89128	1.0427	0.00052967	-3.9653	-0.0020143	-2.9226	-0.0014846	507.9689097282638	16.562	0.33526	16.639	16.523	16.858	0.07715					25	11	3	0	0	0	0.8498	1	121	121		6.001	0.85868	1	66568	+		23479	24912	15853	15863	26928	26928					0.15167046119336192
KRRKVQRGSRR	11	Unmodified	_KRRKVQRGSRR_					0	0	0			REV__ENSG00000124177|ENST00000373233|CHD6	REV__ENSG00000124177|ENST00000373233|CHD6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.30206298828125	3	476.302786	1425.88653	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113	1	113.01	112.51	113.51	0.016953								0	0	0	0.56276	1	13681	13681		12.433	6.734	1		+		23480	18564	15854	15864	26929	26929					0.19062161976535208
KRRLLDQP	8	Unmodified	_KRRLLDQP_					0	0	0			REV__ENSG00000144452|ENST00000272895|ABCA12	REV__ENSG00000144452|ENST00000272895|ABCA12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3175048828125	2	513.314358	1024.61416	0.32644	0.00016757	4.3048	0.0022097	4.6312	0.0023773	513.3163953254575	46.467	0.87729	46.505	46.157	47.034	0.038181					39	23	2	0	0	0	0.884	1	3393	3393		33.516	1.5607	1	188460	+		23481	19890	15855	15865	26930	26930					0.10283960182664487
KRRLLPAGEAP	11	Unmodified	_KRRLLPAGEAP_					0	0	0		nc|ENSG00000005238|Q7L5A3-2|ATOSB;ENSG00000005238|ENST00000322813|ATOSB	nc|ENSG00000005238|Q7L5A3-2|ATOSB	nc|ENSG00000005238|Q7L5A3-2|ATOSB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3656616210938	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.7434	1	12925	12925		23.523	5.2606	1	3346600			23482	679	15856	15866	26931	26931					0.1245987630829859
KRRLMLTSA	9	Unmodified	_KRRLMLTSA_					0	0	0			REV__nc|ENSG00000260220|A0A096LP49-2|CCDC187	REV__nc|ENSG00000260220|A0A096LP49-2|CCDC187	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.326904296875	2	538.323868	1074.63318	1.246	0.00067076	4.3306	0.0023313	5.5767	0.003002	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.76764	1	11013	11013		34.173	2.6427	1	76567000	+		23483	23936	15857	15867	26932	26932					0.09885173482052778
KRRLMLTSA	9	Unmodified	_KRRLMLTSA_					0	0	0			REV__nc|ENSG00000260220|A0A096LP49-2|CCDC187	REV__nc|ENSG00000260220|A0A096LP49-2|CCDC187	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3274536132812	2	538.323868	1074.63318	1.3454	0.00072427	4.2735	0.0023005	5.6189	0.0030248	538.3260218082069	100.6	2.6544	100.9	100.26	102.91	0.2999					222	70	6	0	0	0	0.78983	1	12312	12312		27.882	1.0861	1	18713000	+		23484	23936	15857	15867	26933	26933					0.09885173482052778
KRRLNTQH	8	Unmodified	_KRRLNTQH_					0	0	0		ENST00000334062.7_1_13:114747426-114747723:-|nuORF	ENST00000334062.7_1_13:114747426-114747723:-|nuORF	ENST00000334062.7_1_13:114747426-114747723:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.8073120117188	2	526.807231	1051.59991	-0.037043	-1.9515E-05	1.6124	0.00084942	1.5753	0.0008299	526.8079411043393	101.16	2.0772	101.19	100.26	102.33	0.031029					128	48	4	0	0	0	0.9283	1	10845	10845		49.442	6.9671	1	2562600			23485	10142	15858	15868	26934	26934					0.07617307754389913
KRRLNTQH	8	Unmodified	_KRRLNTQH_					0	0	0		ENST00000334062.7_1_13:114747426-114747723:-|nuORF	ENST00000334062.7_1_13:114747426-114747723:-|nuORF	ENST00000334062.7_1_13:114747426-114747723:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.8070678710938	2	526.807231	1051.59991	3.1222	0.0016448	-1.628	-0.00085765	1.4942	0.00078713	526.8062549875466	101.13	2.204	101.08	100.09	102.29	-0.052116					131	51	4	0	0	0	0.9283	1	11040	11040		49.442	0	1	2494300			23486	10142	15858	15868	26935	26935					0.07617307754389913
KRRLNTQH	8	Unmodified	_KRRLNTQH_					0	0	0		ENST00000334062.7_1_13:114747426-114747723:-|nuORF	ENST00000334062.7_1_13:114747426-114747723:-|nuORF	ENST00000334062.7_1_13:114747426-114747723:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.8074340820312	2	526.807231	1051.59991	-1.5277	-0.0008048	3.0793	0.0016222	1.5516	0.00081739	526.8087430402255	100.83	1.7886	101	100.55	102.33	0.17199					107	43	4	0	0	0	0.94135	1	10542	10542		54.776	16.965	1	3074100			23487	10142	15858	15868	26936	26936					0.07617307754389913
KRRLNTQH	8	Unmodified	_KRRLNTQH_					0	0	0		ENST00000334062.7_1_13:114747426-114747723:-|nuORF	ENST00000334062.7_1_13:114747426-114747723:-|nuORF	ENST00000334062.7_1_13:114747426-114747723:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8073120117188	2	526.807231	1051.59991	2.1591	0.0011374	-1.7045	-0.00089792	0.45462	0.00023949	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.92394	1	12335	12335		47.657	0	1	36320000			23488	10142	15858	15868	26937	26937					0.07617307754389913
KRRLNTQH	8	Unmodified	_KRRLNTQH_					0	0	0		ENST00000334062.7_1_13:114747426-114747723:-|nuORF	ENST00000334062.7_1_13:114747426-114747723:-|nuORF	ENST00000334062.7_1_13:114747426-114747723:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8078002929688	2	526.807231	1051.59991	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.07	1	104.26	103.76	104.76	0.18887								0	0	0	0.29497	1	12662	12662		34.173	1.3601	1				23489	10142	15858	15868	26938	26938					0.07617307754389913
KRRLRESL	8	Unmodified	_KRRLRESL_					0	0	0		ENSG00000244509|ENST00000361441|APOBEC3C	ENSG00000244509|ENST00000361441|APOBEC3C	ENSG00000244509|ENST00000361441|APOBEC3C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.273193359375	2	529.333082	1056.65161	0.078698	4.1657E-05	2.6316	0.001393	2.7103	0.0014347	529.3342999117757	74.828	0.61708	75.393	75.048	75.665	0.56458					30	14	3	0	0	0	0.4196	1	8469	8469		45.952	12.436	1	257400			23490	8823	15859	15869	26939	26939					0.12555051448293852
KRRLVPQLVT	10	Unmodified	_KRRLVPQLVT_					0	0	0			REV__ENSG00000266074|ENST00000675386|BAHCC1	REV__ENSG00000266074|ENST00000675386|BAHCC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.927978515625	3	403.931185	1208.77173	-1.975	-0.00079776	-4.1289	-0.0016678	-6.1039	-0.0024656	403.9294096595759	43	1.2076	43.71	43.311	44.519	0.71021					95	29	4	0	0	0	0.85633	1	3897	3897		21.032	2.5012	1	4109900	+		23491	23962	15860	15870	26940	26940					0.17569039722025082
KRRLYVSFFRR	11	Unmodified	_KRRLYVSFFRR_					0	0	0			REV__ENSG00000071242|ENST00000265678|RPS6KA2	REV__ENSG00000071242|ENST00000265678|RPS6KA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.24029541015625	3	509.972155	1526.89463	-0.46958	-0.00023947	2.8359	0.0014462	2.3663	0.0012068	509.97256865378307	36.445	0.17251	36.469	36.335	36.507	0.023621					6	4	2	0	0	0	0.18185	1	2007	2007		11.932	2.2862	1	35579	+		23492	16624	15861	15871	26941	26941					0.15226296173273113
KRRLYVSFFRR	11	Unmodified	_KRRLYVSFFRR_					0	0	0			REV__ENSG00000071242|ENST00000265678|RPS6KA2	REV__ENSG00000071242|ENST00000265678|RPS6KA2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	509.972155	1526.89463	0.66601	0.00033965	0.93192	0.00047525	1.5979	0.0008149	509.97248180303626	36.274	0.98672	36.556	36.229	37.216	0.28173	0.0048719	0.0012925	NaN	11.932	54	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	511150	+		23493	16624	15861	15871							0.15226296173273113
KRRLYVSFFRR	11	Unmodified	_KRRLYVSFFRR_					0	0	0			REV__ENSG00000071242|ENST00000265678|RPS6KA2	REV__ENSG00000071242|ENST00000265678|RPS6KA2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	509.972155	1526.89463	2.1239	0.0010831	-0.66592	-0.0003396	1.458	0.00074352	509.971634737003	36.187	0.73716	36.627	36.295	37.033	0.44043	0.076778	-0.0011521	NaN	11.932	47	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	547060	+		23494	16624	15861	15871							0.15226296173273113
KRRNKQMLAVL	11	Unmodified	_KRRNKQMLAVL_					0	0	0			REV__ENSG00000092529|ENST00000397163|CAPN3	REV__ENSG00000092529|ENST00000397163|CAPN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.9481506347656	3	452.946729	1355.81836	-1.1932	-0.00054047	4.4156	0.002	3.2224	0.0014596	452.9486366147782	106.8	1.2296	106.95	106.47	107.7	0.14843					124	29	6	0	0	0	0.71207	1	11438	11438		29.551	3.659	1	8171700	+		23495	17035	15862	15872	26942	26942					0.1546815628166769
KRRNWERERIY	11	Unmodified	_KRRNWERERIY_					0	0	0			REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7431640625	3	535.962207	1604.86479	-0.39664	-0.00021259	-2.3545	-0.0012619	-2.7512	-0.0014745	536.2942116892623	62.113	0.13078	62.668	62.603	62.733	0.55449					4	2	2	0	0	0	0.18159	1	6652	6652		12.433	5.4137	1	60017	+		23496	20827	15863	15873	26943	26943					0.08655312437326756
KRRPKRREIPL	11	Unmodified	_KRRPKRREIPL_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.6461486816406	3	483.647671	1447.92118	-0.83511	-0.0004039	-1.4741	-0.00071293	-2.3092	-0.0011168	483.6468148790766	48.119	2.7855	48.141	47.459	50.244	0.02227					217	75	4	0	0	0	0.79716	2	3682	3665;3682		11.932	2.1397	1	1942300			23497	219	15864	15874	26944;26945	26945					0.21513985064643748
KRRPKRREIPL	11	Unmodified	_KRRPKRREIPL_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.9808654785156	3	483.647671	1447.92118	0.31415	0.00015194	-2.841	-0.001374	-2.5269	-0.0012221	483.64616192950325	48.329	2.4983	48.367	47.592	50.09	0.037735					188	68	4	0	0	0	0.79716	1	3694	3694		11.932	3.1331	1	2026900			23498	219	15864	15874	26946	26946					0.21513985064643748
KRRPKRREIPL	11	Unmodified	_KRRPKRREIPL_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.6461486816406	3	483.647671	1447.92118	-0.50388	-0.0002437	-2.3877	-0.0011548	-2.8916	-0.0013985	483.64638428050455	45.883	1.292	46.354	45.807	47.099	0.47139					126	31	5	0	0	0	0.77803	1	4303	4303		15.921	7.1213	1	13323000			23499	219	15864	15874	26947	26947					0.21513985064643748
KRRPLVLAV	9	Unmodified	_KRRPLVLAV_					0	0	0		ENST00000527321.1_1_11:77851057-77852843:+|nuORF	ENST00000527321.1_1_11:77851057-77852843:+|nuORF	ENST00000527321.1_1_11:77851057-77852843:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3613891601562	2	526.358568	1050.70258	0.76968	0.00040513	3.9857	0.0020979	4.7554	0.002503	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.7932	1	2281	2281		24.203	1.1603	1	7968500			23500	13284	15865	15875	26948	26948					0.1792600049311659
KRRPRKKA	8	Unmodified	_KRRPRKKA_					0	0	0		ENST00000599165.5_1_19:48654500-48673536:-|nuORF	ENST00000599165.5_1_19:48654500-48673536:-|nuORF	ENST00000599165.5_1_19:48654500-48673536:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.3529052734375	2	520.351609	1038.68866	5.23	0.0027214	-2.5302	-0.0013166	2.6998	0.0014048	520.3501397770975	109	0.45473	109.09	108.87	109.32	0.090057					36	19	2	0	0	0	0.82419	1	13281	13281		13.775	4.953	1	816010			23501	14372	15866	15876	26949	26949					0.17086767784689982
KRRPRPQGRS	10	Unmodified	_KRRPRPQGRS_					0	0	0			REV__ENST00000440959.2_1_1:180243108-180243874:-|nuORF	REV__ENST00000440959.2_1_1:180243108-180243874:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.3743896484375	2	619.371061	1236.72757	0.60184	0.00037276	1.2365	0.00076584	1.8383	0.0011386	619.3721424545147	101.51	1.6945	101.55	101.22	102.91	0.044823					109	40	4	0	0	0	0.86218	1	11009	11009		32.812	10.853	1	2715800	+		23502	26747	15867	15877	26950	26950					0.11867448348402831
KRRPRRRPRRW	11	Unmodified	_KRRPRRRPRRW_					0	0	0		ENST00000251102.12_1_16:57965650-57974178:-|nuORF	ENST00000251102.12_1_16:57965650-57974178:-|nuORF	ENST00000251102.12_1_16:57965650-57974178:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.56524658203125	4	405.756813	1618.99815	-0.93858	-0.00038084	-1.4543	-0.0005901	-2.3929	-0.00097094	405.7557324840223	60.158	0.18542	60.159	60.031	60.216	0.00051117					8	5	2	0	0	0	0.18372	1	5199	5199		3.4087	3.1223	1	42389			23503	9297	15868	15878	26951	26951					0.2134064112433407
KRRQKREKH	9	Unmodified	_KRRQKREKH_					0	0	0		nc|ENSG00000132970|Q9UPY6-2|WASF3	nc|ENSG00000132970|Q9UPY6-2|WASF3	nc|ENSG00000132970|Q9UPY6-2|WASF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5926208496094	3	422.593566	1264.75887	-0.80518	-0.00034026	-0.93157	-0.00039367	-1.7367	-0.00073394	422.59310710706274	46.905	2.5172	47.828	47.069	49.587	0.92315					149	61	4	0	0	0	0.7932	1	4564	4564		23.523	0.94304	1	3696000			23504	14924	15869	15879	26952	26952					0.13708021382512925
KRRQPILRDLY	11	Unmodified	_KRRQPILRDLY_					0	0	0			REV__ENST00000460671.1_1_1:58928367-58971854:-|nuORF	REV__ENST00000460671.1_1_1:58928367-58971854:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.6274108886719	3	486.628165	1456.86267	1.828	0.00088957	-4.0901	-0.0019904	-2.2621	-0.0011008	486.62614127219416	105.77	0.68383	105.9	105.62	106.3	0.12742					30	21	2	0	0	0	0.79476	1	12882	12882		12.433	0.97822	1	296400	+		23505	27011	15870	15880	26953	26953					0.15250883699513906
KRRQPWVAIVG	11	Unmodified	_KRRQPWVAIVG_					0	0	0		ENST00000538923.1_1_11:94226040-94226943:-|nuORF;ENST00000323977.7_1_11:94226040-94226943:-|nuORF	ENST00000538923.1_1_11:94226040-94226943:-|nuORF	ENST00000538923.1_1_11:94226040-94226943:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2677917480469	3	437.266568	1308.77787	0.29718	0.00012995	2.7258	0.0011919	3.023	0.0013219	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.78683	1	4217	4217		14.086	0.57807	1	4533800			23506	10055	15871	15881	26954	26954					0.13583557953529635
KRRQVFGHNVI	11	Unmodified	_KRRQVFGHNVI_					0	0	0		nc|ENSG00000058668|P23634-5|ATP2B4;nc|ENSG00000058668|P23634-4|ATP2B4;nc|ENSG00000058668|P23634-3|ATP2B4;nc|ENSG00000058668|P23634-2|ATP2B4;nc|ENSG00000058668|P23634-7|ATP2B4;ENSG00000058668|ENST00000357681|ATP2B4;nc|ENSG00000058668|P23634-8|ATP2B4;nc|ENSG00000058668|P23634|ATP2B4	nc|ENSG00000058668|P23634-5|ATP2B4	nc|ENSG00000058668|P23634-5|ATP2B4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9327392578125	3	451.933588	1352.77894	-1.2099	-0.00054677	-0.78569	-0.00035508	-1.9955	-0.00090185	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.74771	1	10415	10415		22.562	0.78116	1	1176100			23507	1045	15872	15882	26955	26955					0.11665772322476187
KRRRAEKMIR	10	Unmodified	_KRRRAEKMIR_					0	0	0			REV__ENSG00000164934|ENST00000612750|DCAF13	REV__ENSG00000164934|ENST00000612750|DCAF13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.6087646484375	3	448.61034	1342.80919	0.51937	0.00023299	-2.6932	-0.0012082	-2.1738	-0.00097519	448.6089579752084	75.063	1.1228	75.195	74.637	75.76	0.13208					79	31	3	0	0	0	0.85086	1	6950	6950		19.263	5.1767	1	398900	+		23508	21131	15873	15883	26956	26956					0.15149807715988572
KRRRAEKMIRQ	11	Unmodified	_KRRRAEKMIRQ_					0	0	0			REV__ENSG00000164934|ENST00000612750|DCAF13	REV__ENSG00000164934|ENST00000612750|DCAF13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.298828125	3	491.296532	1470.86777	2.8436	0.001397	2.3878	0.0011731	5.2314	0.0025702	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.79224	2	12710	12710;12855		12.957	2.8536	1	3274400	+		23509	21131	15874	15884	26957;26958	26957					0.15116864290462217
KRRRAEKMIRQ	11	Unmodified	_KRRRAEKMIRQ_					0	0	0			REV__ENSG00000164934|ENST00000612750|DCAF13	REV__ENSG00000164934|ENST00000612750|DCAF13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.29833984375	3	491.296532	1470.86777	0.79409	0.00039014	3.9876	0.0019591	4.7817	0.0023492	491.2983578004565	110.36	1.7546	110.43	110.06	111.81	0.073685					124	58	3	0	0	0	0.77511	1	11957	11957		16.53	8.4955	1	390370	+		23510	21131	15874	15884	26959	26959					0.15116864290462217
KRRRDRINRCL	11	Unmodified	_KRRRDRINRCL_					0	0	0		nc|ENSG00000187821|A6NFD8-4|HELT;ENSG00000187821|ENST00000515777|HELT	nc|ENSG00000187821|A6NFD8-4|HELT	nc|ENSG00000187821|A6NFD8-4|HELT	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.9588928222656	3	495.960032	1484.85827	-0.74562	-0.0003698	-1.6331	-0.00080994	-2.3787	-0.0011797	495.95916322713595	102.89	1.4225	102.89	101.69	103.11	0					83	35	3	0	0	0	0.79224	1	10492	10492		12.957	1.0251	1	402120			23511	7885	15875	15885	26960	26960					0.13523096004973922
KRRRKRGPGTG	11	Unmodified	_KRRRKRGPGTG_					0	0	0			REV__nc|ENSG00000170004|Q12873-3|CHD3	REV__nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	423.5979309082031	3	423.597199	1267.76977	-0.18424	-7.8043E-05	1.3096	0.00055476	1.1254	0.00047672	423.5976787176537	105.93	2.5264	105.91	105.23	107.75	-0.025146					222	59	5	0	0	0	0.73893	1	11593	11593		21.78	6.4429	1	5735600	+		23512	30022	15876	15886	26961	26961					0.14659423756779688
KRRRKRGPGTG	11	Unmodified	_KRRRKRGPGTG_					0	0	0			REV__nc|ENSG00000170004|Q12873-3|CHD3	REV__nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	423.59796142578125	3	423.597199	1267.76977	2.7179	0.0011513	-1.6898	-0.00071577	1.0282	0.00043553	423.5963997730453	105.86	2.6165	105.82	105.15	107.76	-0.037148					224	61	5	0	0	0	0.70737	1	11814	11814		26.75	3.3718	1	6994400	+		23513	30022	15876	15886	26962	26962					0.14659423756779688
KRRRKRGPGTG	11	Unmodified	_KRRRKRGPGTG_					0	0	0			REV__nc|ENSG00000170004|Q12873-3|CHD3	REV__nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.8931274414062	2	634.892161	1267.76977	2.7956	0.0017749	-2.3873	-0.0015157	0.40838	0.00025928	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.66929	1	11855	11855		36.447	4.9169	1	42597000	+		23514	30022	15876	15886	26963	26963					0.14659423756779688
KRRRMLSSS	9	Unmodified	_KRRRMLSSS_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;ENST00000476350.1_1_1:39768622-39838291:+|nuORF	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.8200073242188	2	560.822024	1119.62949	0.38825	0.00021774	-4.3924	-0.0024634	-4.0042	-0.0022456	560.8194818178797	92.394	2.729	92.618	91.343	94.072	0.22352					209	64	4	0	0	0	0.78983	1	9386	9386		27.882	2.3082	1	816880			23515	3510	15877	15887	26964	26964					0.07446503708206365
KRRRPAFKER	10	Unmodified	_KRRRPAFKER_					0	0	0		ENST00000366756.3_1_6:170599276-170599525:-|nuORF	ENST00000366756.3_1_6:170599276-170599525:-|nuORF	ENST00000366756.3_1_6:170599276-170599525:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.6098327636719	3	448.609216	1342.80582	-0.12449	-5.5849E-05	0.40177	0.00018024	0.27727	0.00012439	448.94365307156517	77.124	0.95989	77.076	76.709	77.669	-0.048264					104	45	3	0	0	0	0.86151	1	7683	7683		15.333	1.2471	1	533170			23516	10518	15878	15888	26965	26965					0.14812880933618544
KRRRPGPAV	9	Unmodified	_KRRRPGPAV_					0	0	0		ENST00000340342.10_1_9:90341067-90342512:+|nuORF;ENST00000375894.9_1_9:90341067-90342991:+|nuORF;ENST00000482054.1_1_9:90341067-90342580:+|nuORF;ENST00000343150.9_1_9:90341067-90342580:+|nuORF	ENST00000340342.10_1_9:90341067-90342512:+|nuORF	ENST00000340342.10_1_9:90341067-90342512:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.810791015625	2	518.827966	1035.64138	1.9472	0.0010102	-0.61183	-0.00031743	1.3353	0.00069281	518.8284697971579	98.43	0.49469	98.791	98.441	98.936	0.36136					17	11	2	0	0	0	0.20789	1	11866	11866		37.159	1.5408	1	79573			23517	10231	15879	15889	26966	26966					0.12498488513710981
KRRRPRSD	8	Unmodified	_KRRRPRSD_					0	0	0			REV__ENST00000515156.2_1_5:68927792-68932223:+|nuORF	REV__ENST00000515156.2_1_5:68927792-68932223:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.815185546875	2	535.81813	1069.62171	-0.091924	-4.9255E-05	-1.2272	-0.00065757	-1.3192	-0.00070683	535.8178493049433	99.302	1.7934	99.351	99.017	100.81	0.049828					71	41	3	0	0	0	0.87064	1	10555	10555		29.15	4.9468	1	385560	+		23518	28027	15880	15890	26967	26967					0.08968112502930126
KRRRRKEKRKY	11	Unmodified	_KRRRRKEKRKY_					0	0	0			REV__ENST00000480732.2_1_1:78407858-78408185:+|nuORF	REV__ENST00000480732.2_1_1:78407858-78408185:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	535.3258666992188	3	535.341241	1603.00189	3.4757	0.0018607	-0.34052	-0.00018229	3.1352	0.0016784	535.3396803089194	107.89	0.1106	107.86	107.77	107.88	-0.031487					4	2	2	0	0	0	0.18396	1	11969	11969		5.1424	3.7236	1	1240500	+		23519	27425	15881	15891	26968	26968					0.2245126610753232
KRRRRKEKRKY	11	Unmodified	_KRRRRKEKRKY_					0	0	0			REV__ENST00000480732.2_1_1:78407858-78408185:+|nuORF	REV__ENST00000480732.2_1_1:78407858-78408185:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.3248291015625	3	535.341241	1603.00189	0.023702	1.2689E-05	-2.9709	-0.0015905	-2.9472	-0.0015778	535.3395392630432	107.87	0.098679	108.01	107.93	108.03	0.13866					4	2	2	0	0	0	0.18331	1	11610	11610		9.2118	6.1858	1	1425300	+		23520	27425	15881	15891	26969	26969					0.2245126610753232
KRRRRKEKRKY	11	Unmodified	_KRRRRKEKRKY_					0	0	0			REV__ENST00000480732.2_1_1:78407858-78408185:+|nuORF	REV__ENST00000480732.2_1_1:78407858-78408185:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	535.3250732421875	3	535.341241	1603.00189	-1.4999	-0.00080298	2.433	0.0013025	0.93303	0.00049949	535.3428551886302	107.88	0.10252	107.92	107.83	107.93	0.036125					4	2	2	0	0	0	0.18331	1	11525	11525		3.026	1.6072	1	1900100	+		23521	27425	15881	15891	26970	26970					0.2245126610753232
KRRRRKPLV	9	Unmodified	_KRRRRKPLV_					0	0	0			REV__ENST00000463792.5_1_2:220099420-220100035:+|nuORF	REV__ENST00000463792.5_1_2:220099420-220100035:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.57476806640625	3	403.610669	1207.81018	0.93394	0.00037695	3.6015	0.0014536	4.5354	0.0018305	403.6125765806878	80.911	0.32936	81.332	81.06	81.39	0.4215					10	7	2	0	0	0	0.20789	1	9296	9296		24.519	0.28737	1	50970	+		23522	20927	15882	15892	26971	26971					0.2145839014719968
KRRRRRKPKQK	11	Unmodified	_KRRRRRKPKQK_					0	0	0		ENSG00000132793|ENST00000373257|LPIN3;nc|ENSG00000132793|Q9BQK8-2|LPIN3	ENSG00000132793|ENST00000373257|LPIN3	ENSG00000132793|ENST00000373257|LPIN3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.0086059570312	3	513.009714	1536.00731	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.719	1	15.121	14.621	15.621	-0.59873								0	0	0	0.56276	1	40	40		6.6596	3.2509	1				23523	3828	15883	15893	26972	26972					0.2607498969000517
KRRRRRRRQL	10	Unmodified	_KRRRRRRRQL_					0	0	0			REV__ENST00000607809.5_1_12:54472874-54474119:-|nuORF	REV__ENST00000607809.5_1_12:54472874-54474119:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3277282714844	3	494.325925	1479.95595	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.011	1	15.06	14.56	15.56	0.04908								0	0	0	0.45132	1	2	2		16.717	5.0815	1		+		23524	29392	15884	15894	26973	26973					0.23516665715965246
KRRRRSARRES	11	Unmodified	_KRRRRSARRES_					0	0	0			REV__nc|ENSG00000150510|Q86V42-3|FAM124A	REV__nc|ENSG00000150510|Q86V42-3|FAM124A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.9615173339844	3	486.625929	1456.85596	1.8943	0.00092183	0.78058	0.00037985	2.6749	0.0013017	486.62614710515385	107.07	0.77946	107.18	106.86	107.64	0.10396					47	27	2	0	0	0	0.79945	1	13090	13090		11.455	0	1	189080	+		23525	20211	15885	15895	26974	26974					0.1458038359148759
KRRRTLFE	8	Unmodified	_KRRRTLFE_					0	0	0		nc|ENSG00000134899|P28715-3|ERCC5;ENSG00000134899|ENST00000652225|ERCC5	nc|ENSG00000134899|P28715-3|ERCC5	nc|ENSG00000134899|P28715-3|ERCC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.3325805664062	2	553.333082	1104.65161	0.81959	0.00045351	-2.0317	-0.0011242	-1.2121	-0.00067069	553.3317918445606	96.793	1.7474	96.956	96.403	98.15	0.16317					118	40	4	0	0	0	0.87064	1	10145	10145		29.15	4.9468	1	2701500			23526	3968	15886	15896	26975	26975					0.10347051448297861
KRRRTYLGG	9	Unmodified	_KRRRTYLGG_					0	0	0		nc|ENSG00000130363|Q86UC2|RSPH3;nc|ENSG00000130363|Q86UC2-2|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8298950195312	2	553.830706	1105.64686	-1.2274	-0.00067979	0.095928	5.3128E-05	-1.1315	-0.00062666	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.78536	1	10352	10352		29.15	0	1	1825600			23527	14904	15887	15897	26976	26976					0.09826167305504896
KRRRVSKG	8	Unmodified	_KRRRVSKG_					0	0	0		nc|ENSG00000183337|Q6W2J9-4|BCOR;nc|ENSG00000183337|Q6W2J9-2|BCOR	nc|ENSG00000183337|Q6W2J9-4|BCOR	nc|ENSG00000183337|Q6W2J9-4|BCOR	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.8236389160156	2	493.820141	985.62573	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.671	1	20.739	20.239	21.239	0.068251								0	0	0	0.30579	1	505	505		16.473	3.514	1				23528	15142	15888	15898	26977	26977					0.13234201996658612
KRRRWQWWKKR	11	Unmodified	_KRRRWQWWKKR_					0	0	0		ENST00000324344.8_1_16:20911624-20911678:-|nuORF	ENST00000324344.8_1_16:20911624-20911678:-|nuORF	ENST00000324344.8_1_16:20911624-20911678:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.3225708007812	3	572.006081	1712.99641	-0.39383	-0.00022527	-3.4042	-0.0019472	-3.798	-0.0021725	572.0035410746844	64.693	0.12193	65.079	64.991	65.113	0.38615					4	2	2	0	0	0	0.18422	1	7002	7002		0.31226	0	1	52419			23529	10058	15889	15899	26978	26978					0.16843587315679542
KRRSGLRGAGT	11	Unmodified	_KRRSGLRGAGT_					0	0	0			REV__nc|ENSG00000099814|Q9Y4F5-3|CEP170B	REV__nc|ENSG00000099814|Q9Y4F5-3|CEP170B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	579.8444213867188	2	579.844345	1157.67414	0.68543	0.00039744	-1.1185	-0.00064856	-0.43307	-0.00025111	579.8435684562951	102.05	1.3312	102.24	101.84	103.17	0.19483					96	32	4	0	0	0	0.7434	1	10707	10707		23.523	1.8369	1	2191200	+		23530	17106	15890	15900	26979	26979					0.10160650845887176
KRRSKSRGG	9	Unmodified	_KRRSKSRGG_					0	0	0		ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2	ENSG00000148219|ENST00000313400|ASTN2	ENSG00000148219|ENST00000313400|ASTN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3143310546875	2	516.312681	1030.61081	1.791	0.00092474	0.77336	0.00039929	2.5644	0.001324	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.7932	1	12219	12219		23.523	0.48021	1	24820000			23531	4940	15891	15901	26980	26980					0.0967271012866604
KRRSRPKPRE	10	Unmodified	_KRRSRPKPRE_					0	0	0			REV__ENSG00000119919|ENST00000344586|NKX2-3	REV__ENSG00000119919|ENST00000344586|NKX2-3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2679138183594	3	437.268971	1308.78508	-1.7231	-0.00075344	-0.84838	-0.00037097	-2.5714	-0.0011244	437.26850375985913	50.916	1.5264	50.916	50.06	51.586	0					171	39	5	0	0	0	0.84763	2	4168	4145;4168		28.577	7.7396	1	3001200	+		23532	18386	15892	15902	26981;26982	26982					0.1430429055399145
KRRSRPKPRE	10	Unmodified	_KRRSRPKPRE_					0	0	0			REV__ENSG00000119919|ENST00000344586|NKX2-3	REV__ENSG00000119919|ENST00000344586|NKX2-3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2679138183594	3	437.268971	1308.78508	-0.040503	-1.7711E-05	-2.5098	-0.0010974	-2.5503	-0.0011151	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.86409	1	4200	4200		25.126	2.5644	1	2735300	+		23533	18386	15892	15902	26983	26983					0.1430429055399145
KRRSRPKPRE	10	Unmodified	_KRRSRPKPRE_					0	0	0			REV__ENSG00000119919|ENST00000344586|NKX2-3	REV__ENSG00000119919|ENST00000344586|NKX2-3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26776123046875	3	437.268971	1308.78508	-0.071191	-3.113E-05	-2.4084	-0.0010531	-2.4796	-0.0010843	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.85004	1	4411	4411		17.167	0.63689	1	3270700	+		23534	18386	15892	15902	26984	26984					0.1430429055399145
KRRVELKC	8	Unmodified	_KRRVELKC_					0	0	0		ENSG00000177679|ENST00000611745|SRRM3;nc|ENSG00000177679|A6NNA2|SRRM3	ENSG00000177679|ENST00000611745|SRRM3	ENSG00000177679|ENST00000611745|SRRM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3135986328125	2	516.310761	1030.60697	2.7794	0.001435	3.1012	0.0016012	5.8806	0.0030362	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.87479	1	11031	11031		30.504	0	1	67991000			23535	7154	15893	15903	26985	26985					0.0928890431059699
KRRVRRKTFVS	11	Unmodified	_KRRVRRKTFVS_					0	0	0		nc|ENSG00000155393|Q7Z4Q2-3|HEATR3;nc|ENSG00000155393|Q7Z4Q2-2|HEATR3;ENSG00000155393|ENST00000299192|HEATR3	nc|ENSG00000155393|Q7Z4Q2-3|HEATR3	nc|ENSG00000155393|Q7Z4Q2-3|HEATR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.30126953125	3	478.303904	1431.88988	-0.48825	-0.00023353	-1.5506	-0.00074167	-2.0389	-0.0009752	478.30300632886104	67.214	1.2093	67.178	66.747	67.957	-0.035698					104	51	3	0	0	0	0.7896	1	6465	6465		13.508	4.2961	1	289200			23536	5323	15894	15904	26986	26986					0.1912141203054034
KRRWKQFLKLL	11	Unmodified	_KRRWKQFLKLL_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|5|1|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|5|1|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	505.9738464355469	3	505.992667	1514.95617	-0.057051	-2.8867E-05	3.092	0.0015645	3.035	0.0015357	505.9941229910404	107.91	0.10657	107.87	107.78	107.89	-0.042404					4	2	2	0	0	0	0.18318	1	11752	11752		6.001	0.30226	1	647720	+		23537	29553	15895	15905	26987	26987					0.21929227872601587
KRRYFLLRAS	10	Unmodified	_KRRYFLLRAS_					0	0	0		ENSG00000077420|ENST00000376236|APBB1IP	ENSG00000077420|ENST00000376236|APBB1IP	ENSG00000077420|ENST00000376236|APBB1IP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26800537109375	3	437.266568	1308.77787	1.2133	0.00053055	1.7295	0.00075624	2.9428	0.0012868	437.2672396896614	50.554	1.7579	50.562	49.504	51.262	0.0077477					187	47	5	0	0	0	0.86549	1	4329	4329		29.551	1.9068	1	3327600			23538	1381	15896	15906	26988	26988					0.13583557953552372
KRRYFLLRAS	10	Unmodified	_KRRYFLLRAS_					0	0	0		ENSG00000077420|ENST00000376236|APBB1IP	ENSG00000077420|ENST00000376236|APBB1IP	ENSG00000077420|ENST00000376236|APBB1IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2676696777344	3	437.266568	1308.77787	0.78044	0.00034126	1.9459	0.0008509	2.7264	0.0011922	437.26733211231357	49.246	1.5472	50.15	49.725	51.272	0.90424					125	37	5	0	0	0	0.85086	1	4831	4831		19.263	0.73163	1	5667400			23539	1381	15896	15906	26989	26989					0.13583557953552372
KRRYRDLL	8	Unmodified	_KRRYRDLL_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3403930664062	2	560.340907	1118.66726	-0.40673	-0.00022791	-0.80506	-0.00045111	-1.2118	-0.00067902	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.91977	1	10792	10792		45.952	5.1738	1	60162000			23540	7785	15897	15907	26990	26990					0.11267337965318802
KRRYRDLL	8	Unmodified	_KRRYRDLL_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3399047851562	2	560.340907	1118.66726	-1.1297	-0.00063301	-0.12552	-7.0334E-05	-1.2552	-0.00070335	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.87064	2	11235	11235;11260		31.955	2.8053	1	84412000			23541	7785	15897	15907	26991;26992	26991					0.11267337965318802
KRRYRDLL	8	Unmodified	_KRRYRDLL_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3402099609375	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.8347	1	11373	11373		23.042	0	1	81463000			23542	7785	15897	15907	26993	26993					0.11267337965318802
KRRYRDLL	8	Unmodified	_KRRYRDLL_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3405151367188	2	560.340907	1118.66726	0.86176	0.00048288	-2.22	-0.001244	-1.3582	-0.00076107	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.8621	1	11138	11138		26.693	3.6504	1	126390000			23543	7785	15897	15907	26994	26994					0.11267337965318802
KRRYRDLL	8	Unmodified	_KRRYRDLL_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3402099609375	2	560.340907	1118.66726	2.2618	0.0012674	-3.4816	-0.0019509	-1.2198	-0.00068351	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.87064	1	12427	12427		29.15	0	1	14759000			23544	7785	15897	15907	26995	26995					0.11267337965318802
KRSGHGDEY	9	Unmodified	_KRSGHGDEY_					0	0	0			REV__ENST00000588465.5_1_19:10713206-10745972:+|nuORF	REV__ENST00000588465.5_1_19:10713206-10745972:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.74267578125	2	524.743962	1047.47337	0.86491	0.00045386	-1.3242	-0.00069485	-0.45926	-0.000241	524.74331637429	25.624	0.89235	25.592	25.164	26.057	-0.032125					47	27	2	0	0	0	0.55097	1	1059	1059		49.442	7.0454	1	45071	+		23545	18820	15898	15908	26996	26996					-0.04846663261400863
KRSIALPK	8	Unmodified	_KRSIALPK_					0	0	0			REV__ENSG00000178177|ENST00000635767|LCORL	REV__ENSG00000178177|ENST00000635767|LCORL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7928161621094	2	456.803094	911.591636	-1.5167	-0.00069283	1.0446	0.00047716	-0.47212	-0.00021567	456.80334411075324	38.242	0.281	38.253	38.166	38.447	0.011173					9	6	2	0	0	0	0.4196	1	2612	2612		42.396	26.754	1	75278	+		23546	22262	15899	15909	26997	26997					0.1323036078504174
KRSIGKFF	8	Unmodified	_KRSIGKFF_					0	0	0			REV__nc|ENSG00000101336|P08631-3|HCK	REV__nc|ENSG00000101336|P08631-3|HCK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7956237792969	2	491.795269	981.575986	-0.41148	-0.00020237	1.3216	0.00064997	0.91013	0.0004476	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.81548	1	4457	4457		20.482	1.1219	1	887820	+		23547	17268	15900	15910	26998	26998					0.08446074267999393
KRSLGVGY	8	Unmodified	_KRSLGVGY_					0	0	0		ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2539367675781	2	440.255977	878.497401	-0.82974	-0.0003653	-0.76393	-0.00033632	-1.5937	-0.00070162	440.2556367977485	60.313	1.0519	60.313	60.031	61.083	0.00051117					60	36	3	0	0	0	0.86288	1	5279	5279		26.796	1.3459	1	290170			23548	2692	15901	15911	26999	26999					0.05329221962904285
KRSLKAHG	8	Unmodified	_KRSLKAHG_					0	0	0		ENSG00000204947|ENST00000378061|ZNF425	ENSG00000204947|ENST00000378061|ZNF425	ENSG00000204947|ENST00000378061|ZNF425	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.77398681640625	2	448.774868	895.535184	0.21176	9.5034E-05	3.8418	0.0017241	4.0536	0.0018192	448.7764318361709	40.896	1.1217	40.978	40.553	41.675	0.081345					59	36	2	0	0	0	0.87922	1	2625	2625		31.955	5.1588	1	280070			23549	8501	15902	15912	27000	27000					0.08323732948372253
KRSLKAHG	8	Unmodified	_KRSLKAHG_					0	0	0		ENSG00000204947|ENST00000378061|ZNF425	ENSG00000204947|ENST00000378061|ZNF425	ENSG00000204947|ENST00000378061|ZNF425	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.7739562988281	2	448.774868	895.535184	-0.1121	-5.0308E-05	4.2929	0.0019266	4.1808	0.0018763	448.77666554386593	40.996	1.3045	40.951	40.614	41.918	-0.045471					57	40	2	0	0	0	0.89494	1	2639	2639		37.159	3.6435	1	307540			23550	8501	15902	15912	27001	27001					0.08323732948372253
KRSLLLTVVQV	11	Unmodified	_KRSLLLTVVQV_					0	0	0			REV__ENST00000435620.6_1_3:197803775-197807401:-|nuORF	REV__ENST00000435620.6_1_3:197803775-197807401:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.9394226074219	3	419.274729	1254.80236	-0.80398	-0.00033709	-3.5042	-0.0014692	-4.3082	-0.0018063	419.27297132381113	48.947	0.26383	48.922	48.75	49.014	-0.02467					7	5	2	0	0	0	0.17437	1	4156	4156		20.315	13.994	1	31649	+		23551	26679	15903	15913	27002	27002					0.18514773316405808
KRSLPHGG	8	Unmodified	_KRSLPHGG_					0	0	0			REV__ENST00000396987.7_1_8:41478885-41479125:+|nuORF	REV__ENST00000396987.7_1_8:41478885-41479125:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2459716796875	2	426.245944	850.477334	2.6022	0.0011092	-2.3558	-0.0010042	0.24641	0.00010503	426.2448505635507	87.493	3.3011	87.546	86.187	89.488	0.053024					131	77	2	0	0	0	0.79929	3	8912	8912;8934;9009		37.159	10.363	1	4266000	+		23552	26154	15904	15914	27003;27004;27005	27003					0.046114710229517186
KRSLPHGG	8	Unmodified	_KRSLPHGG_					0	0	0			REV__ENST00000396987.7_1_8:41478885-41479125:+|nuORF	REV__ENST00000396987.7_1_8:41478885-41479125:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.2457580566406	2	426.245944	850.477334	0.61593	0.00026254	-0.31325	-0.00013352	0.30267	0.00012901	426.24572360202285	87.518	4.0945	87.668	85.602	89.696	0.14956					180	96	4	0	0	0	0.87922	1	8716	8716		31.955	5.1588	1	3688500	+		23553	26154	15904	15914	27006	27006					0.046114710229517186
KRSLPHGG	8	Unmodified	_KRSLPHGG_					0	0	0			REV__ENST00000396987.7_1_8:41478885-41479125:+|nuORF	REV__ENST00000396987.7_1_8:41478885-41479125:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2463684082031	2	426.245944	850.477334	-0.71681	-0.00030554	0.86718	0.00036963	0.15037	6.4093E-05	426.24624802256477	87.382	3.0594	87.845	86.168	89.227	0.46312					121	74	2	0	0	0	0.80706	2	10261	10261;10346		25.45	0	1	3022100	+		23554	26154	15904	15914	27007;27008	27007					0.046114710229517186
KRSLPHSA	8	Unmodified	_KRSLPHSA_					0	0	0			REV__ENSG00000088756|ENST00000383472|ARHGAP28	REV__ENSG00000088756|ENST00000383472|ARHGAP28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.2586669921875	2	448.259051	894.503549	-1.2915	-0.00057894	1.2791	0.00057339	-0.012395	-5.5564E-06	448.25951221432746	89.806	3.6834	90.019	87.898	91.582	0.21272					200	88	5	0	0	0	0.86677	1	9037	9037		27.882	1.0861	1	3037400	+		23555	16945	15905	15915	27009	27009					0.05207740194418875
KRSLPLLRNV	10	Unmodified	_KRSLPLLRNV_					0	0	0		ENST00000492618.5_1_7:56127319-56128022:+|nuORF	ENST00000492618.5_1_7:56127319-56128022:+|nuORF	ENST00000492618.5_1_7:56127319-56128022:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.8826293945312	2	598.385314	1194.75608	-2.4045	-0.0014388	-4.123	-0.0024671	-6.5275	-0.0039059	598.3827122218626	40.848	1.3552	40.855	40.235	41.59	0.0065727					86	35	3	0	0	0	0.86272	1	2947	2947		24.519	4.5224	1	583190			23556	12706	15906	15916	27010	27010					0.16648753204981404
KRSRGKSG	8	Unmodified	_KRSRGKSG_					0	0	0		ENSG00000115486|ENST00000233838|GGCX;nc|ENSG00000115486|P38435-2|GGCX	ENSG00000115486|ENST00000233838|GGCX	ENSG00000115486|ENST00000233838|GGCX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26153564453125	2	438.262125	874.509697	-0.12841	-5.6275E-05	1.6254	0.00071235	1.497	0.00065608	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.87479	1	2518	2518		30.504	2.6214	1	21381000			23557	2849	15907	15917	27011	27011					0.0674225842595888
KRSRLPLALVS	11	Unmodified	_KRSRLPLALVS_					0	0	0			REV__ENSG00000170468|ENST00000304061|RIOX1	REV__ENSG00000170468|ENST00000304061|RIOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.932861328125	3	413.934706	1238.78229	-1.0065	-0.00041663	-3.7709	-0.0015609	-4.7774	-0.0019775	413.93306098265026	44.954	2.5911	44.923	43.876	46.467	-0.031067					192	60	4	0	0	0	0.72374	1	3683	3683		27.644	4.266	1	748080	+		23558	21664	15908	15918	27012	27012					0.1724502237645993
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	642.3653564453125	2	642.362567	1282.71058	0.024157	1.5517E-05	0.45519	0.0002924	0.47935	0.00030792	642.3631004001724	110.04	0.91905	110.04	109.8	110.72	0					76	31	3	0	0	0	0.67778	2	11421	11421;11446		35.152	2.3396	1	235710			23559	5595	15909	15919	27013;27014	27013					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.86474609375	2	642.362567	1282.71058	-0.042196	-2.7105E-05	0.60292	0.00038729	0.56072	0.00036018	642.3635952564791	110.33	1.0043	110.28	110.08	111.09	-0.055077					98	36	3	0	0	0	0.61369	3	12001	11991;12001;12039		42.864	3.418	1	348750			23560	5595	15909	15919	27015;27016;27017	27016					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.363525390625	2	642.362567	1282.71058	-0.042366	-2.7214E-05	-0.63637	-0.00040878	-0.67874	-0.000436	642.3621422971506	112.55	0.35496	112.48	112.39	112.75	-0.063889					30	11	4	0	0	0	0.74763	2	12224	12224;12230		22.58	0.89391	1	319940			23561	5595	15909	15919	27018;27019	27018					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3601684570312	2	642.362567	1282.71058	-0.045499	-2.9227E-05	0.19938	0.00012807	0.15388	9.8846E-05	642.3621276382021	112.89	0.16151	112.82	112.76	112.93	-0.067215					10	6	2	0	0	0	0.69931	2	12263	12256;12263		31.634	9.9485	1	51533			23562	5595	15909	15919	27020;27021	27021					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.361328125	2	642.362567	1282.71058	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.9	1	118.83	118.33	119.33	-0.07531								0	0	0	0.56276	1	12757	12757		38.754	5.9412	1				23563	5595	15909	15919	27022	27022					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3623046875	2	642.362567	1282.71058	2.6974	0.0017327	-3.3023	-0.0021213	-0.60484	-0.00038853	642.3601603180224	112.87	0.9769	112.84	112.65	113.62	-0.024811					46	24	2	0	0	0	0.53361	2	12517	12517;12535		49.536	8.7579	1	12229000			23564	5595	15909	15919	27023;27024	27023					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3627319335938	2	642.362567	1282.71058	2.6974	0.0017327	-3.5531	-0.0022824	-0.85574	-0.00054969	642.359695370679	114.18	2.3126	114.16	113.46	115.77	-0.024452					163	86	2	0	0	0	0.57736	2	12594	12594;12741		46.457	11.305	1	464940			23565	5595	15909	15919	27025;27026	27025					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3638305664062	2	642.362567	1282.71058	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.05	1	112.08	111.58	112.58	0.028854								0	0	0	0.56276	1	12256	12256		41.427	3.6151	1				23566	5595	15909	15919	27027	27027					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.3646240234375	2	642.362567	1282.71058	1.6044	0.0010306	-1.7666	-0.0011348	-0.16219	-0.00010418	642.3622346823327	110.04	1.0264	110.16	109.72	110.75	0.1229					129	37	5	0	0	0	0.45992	3	11818	11818;11854;11885		54.722	14.664	1	10986000			23567	5595	15909	15919	27028;27029;27030	27028					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.3623657226562	2	642.362567	1282.71058	1.6043	0.0010305	-1.5853	-0.0010183	0.018972	1.2187E-05	642.3621659530644	110.8	0.90775	110.92	110.61	111.52	0.11658					128	36	4	0	0	0	0.67778	1	11960	11960		35.152	4.8343	1	486380			23568	5595	15909	15919	27031	27031					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.3619995117188	2	642.362567	1282.71058	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.02	1	119.11	118.61	119.61	0.087753								0	0	0	0.56276	1	12530	12530		46.457	7.2039	1				23569	5595	15909	15919	27032	27032					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.3631591796875	2	642.362567	1282.71058	0.94221	0.00060524	-0.99685	-0.00064034	-0.054636	-3.5096E-05	642.362532628932	110	1.3046	110.07	109.67	110.98	0.073685					156	47	4	0	0	0	0.53361	4	11817	11817;11846;11902;11919		49.536	10.205	1	7000400			23570	5595	15909	15919	27033;27034;27035;27036	27033					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.363525390625	2	642.362567	1282.71058	0.94243	0.00060538	-1.2781	-0.00082101	-0.33568	-0.00021563	642.3626446280917	111.26	0.57246	111.33	110.96	111.53	0.069542					80	21	4	0	0	0	0.48529	1	11951	11951		52.937	13.684	1	3156600			23571	5595	15909	15919	27037	27037					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.361328125	2	642.362567	1282.71058	0.94239	0.00060536	-1.3465	-0.00086493	-0.40409	-0.00025957	642.3624609257909	112.22	0.24821	112.29	112.11	112.36	0.066025					25	8	4	0	0	0	0.68532	1	12073	12073		33.922	1.1092	1	1562800			23572	5595	15909	15919	27038	27038					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.8651733398438	2	642.362567	1282.71058	-1.1506	-0.00073908	1.3629	0.0008755	0.21236	0.00013641	642.3639567174044	110.02	1.5274	110.03	109.72	111.24	0.0060425					172	55	4	0	0	0	0.67778	1	11785	11785		35.152	0.97948	1	1394500			23573	5595	15909	15919	27039	27039					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.364990234375	2	642.362567	1282.71058	-1.1501	-0.00073879	0.54284	0.0003487	-0.60728	-0.00039009	642.364177403599	111.36	0.50385	111.34	111.22	111.72	-0.019882					60	18	5	0	0	0	0.66009	1	11863	11863		37.508	9.4267	1	9278200			23574	5595	15909	15919	27040	27040					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.363525390625	2	642.362567	1282.71058	2.0845	0.001339	-1.1571	-0.00074331	0.92738	0.00059572	642.361819653108	110.23	1.6844	110.29	109.66	111.35	0.054062					109	58	2	0	0	0	0.26196	6	13366	13329;13336;13358;13366;13396;13426		76.17	28.21	1	2848100			23575	5595	15909	15919	27041;27042;27043;27044;27045;27046	27044					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3639526367188	2	642.362567	1282.71058	2.0884	0.0013415	-1.443	-0.00092695	0.64532	0.00041453	642.3616530079581	111.61	0.45724	111.65	111.39	111.85	0.041832					30	15	2	0	0	0	0.48529	1	13492	13492		52.937	3.4952	1	12688000			23576	5595	15909	15919	27047	27047					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3627319335938	2	642.362567	1282.71058	2.0888	0.0013417	-1.0815	-0.00069471	1.0073	0.00064703	642.3618339329189	111.95	0.24531	111.99	111.85	112.1	0.041832					12	6	2	0	0	0	0.69248	1	13526	13526		32.751	2.4328	1	732830			23577	5595	15909	15919	27048	27048					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3613891601562	2	642.362567	1282.71058	2.0883	0.0013414	-1.9826	-0.0012736	0.10569	6.7891E-05	642.3608064218109	112.21	4.9435	112.24	112.06	117	0.030602					291	230	2	0	0	0	0.7144	1	13869	13869		29.17	2.4771	1	12073000			23578	5595	15909	15919	27049	27049					0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	642.362567	1282.71058	2.6961	0.0017318	-1.1877	-0.00076295	1.5083	0.0009689	642.36271081433	110.08	0.59441	110.05	109.92	110.52	-0.027634	-0.095091	-0.00046655	NaN	76.17	42	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	193120			23579	5595	15909	15919							0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	642.362567	1282.71058	2.6979	0.001733	-1.6065	-0.001032	1.0913	0.00070103	642.3614862410728	110.98	0.6926	110.96	110.44	111.13	-0.026321	-0.25699	-0.0021791	NaN	52.937	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	362170			23580	5595	15909	15919							0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	642.362567	1282.71058	1.7082	0.0010973	-1.7683	-0.0011359	-0.060107	-3.861E-05	642.3613366537298	111.3	0.53779	111.33	111.19	111.73	0.030388	0.11161	-0.0023869	NaN	52.937	29	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27695			23581	5595	15909	15919							0.08053482951959268
KRSRSGYKKSS	11	Unmodified	_KRSRSGYKKSS_					0	0	0		nc|ENSG00000160588|Q6UWV2-2|MPZL3;ENSG00000160588|ENST00000278949|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	nc|ENSG00000160588|Q6UWV2-2|MPZL3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	642.362567	1282.71058	2.0879	0.0013412	-0.71864	-0.00046162	1.3693	0.00087956	642.8636530855173	111.31	0.1705	111.35	111.22	111.39	0.041832	0.13312	-0.0010384	NaN	52.937	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2086500			23582	5595	15909	15919							0.08053482951959268
KRSSFFIK	8	Unmodified	_KRSSFFIK_					0	0	0		ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-7|EPB41	ENSG00000159023|ENST00000343067|EPB41	ENSG00000159023|ENST00000343067|EPB41	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.7995300292969	2	506.800552	1011.58655	-0.1225	-6.2083E-05	1.1991	0.00060769	1.0766	0.00054561	506.8011249172422	46.216	2.1586	46.137	45.418	47.576	-0.079006					85	63	2	0	0	0	0.84341	1	3328	3328		24.203	3.2558	1	271040			23583	5507	15910	15920	27050	27050					0.08122056922422871
KRSSGGLPAPS	11	Unmodified	_KRSSGGLPAPS_					0	0	0		nc|ENSG00000074603|Q6V1X1-2|DPP8;ENSG00000074603|ENST00000300141|DPP8;nc|ENSG00000074603|Q6V1X1|DPP8;nc|ENSG00000074603|Q6V1X1-4|DPP8;nc|ENSG00000074603|Q6V1X1-5|DPP8	nc|ENSG00000074603|Q6V1X1-2|DPP8	nc|ENSG00000074603|Q6V1X1-2|DPP8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7926025390625	2	528.793455	1055.57236	1.0935	0.00057822	-1.1708	-0.00061909	-0.077289	-4.087E-05	528.7928379036528	35.778	2.2829	36.025	35.438	37.721	0.24769					158	56	6	0	0	0	0.36477	1	2738	2738		62.107	2.1766	1	16698000			23584	1309	15911	15921	27051	27051					0.046793597034593404
KRSTTLTKHK	10	Unmodified	_KRSTTLTKHK_					0	0	0		nc|ENSG00000198039|Q14593-2|ZNF273;ENSG00000198039|ENST00000476120|ZNF273	nc|ENSG00000198039|Q14593-2|ZNF273	nc|ENSG00000198039|Q14593-2|ZNF273	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.58050537109375	3	400.578811	1198.7146	2.7176	0.0010886	1.583	0.00063413	4.3007	0.0017228	400.57928348734663	112.87	0.76526	112.84	112.7	113.46	-0.024811					36	18	3	0	0	0	0.86621	1	12514	12514		26.063	2.6855	1	3158500			23585	8228	15912	15922	27052	27052					0.12319572445653648
KRSVKKYS	8	Unmodified	_KRSVKKYS_					0	0	0		nc|ENSG00000143498|Q15573-2|TAF1A;ENSG00000143498|ENST00000352967|TAF1A	nc|ENSG00000143498|Q15573-2|TAF1A	nc|ENSG00000143498|Q15573-2|TAF1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.3032531738281	2	498.303458	994.592364	0.46261	0.00023052	-0.96491	-0.00048082	-0.50229	-0.00025029	498.3028155429852	31.945	0.72806	32.052	31.675	32.403	0.10707					35	16	3	0	0	0	0.884	1	2216	2216		33.516	3.0119	1	354970			23586	4637	15913	15923	27053	27053					0.0948515543409485
KRSVSAKG	8	Unmodified	_KRSVSAKG_					0	0	0			REV__ENSG00000149929|ENST00000279392|HIRIP3	REV__ENSG00000149929|ENST00000279392|HIRIP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.75482177734375	2	416.753601	831.49265	0.85655	0.00035697	2.7214	0.0011341	3.5779	0.0014911	416.7546905427035	66.077	1.7412	66.462	65.937	67.678	0.38581					138	48	4	0	0	0	0.88185	2	7178	7178;7257		37.159	4.5581	1	3980900	+		23587	20200	15914	15924	27054;27055	27054					0.07016337820141416
KRTARSLAR	9	Unmodified	_KRTARSLAR_					0	0	0		ENST00000587757.5_1_18:13611820-13612183:+|nuORF	ENST00000587757.5_1_18:13611820-13612183:+|nuORF	ENST00000587757.5_1_18:13611820-13612183:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7886352539062	2	529.830706	1057.64686	0.32677	0.00017313	3.4624	0.0018345	3.7892	0.0020076	529.8321471014626	32.192	0.64612	32.318	31.988	32.634	0.12643					20	14	2	0	0	0	0.20789	1	2264	2264		37.812	4.9991	1	140850			23588	14197	15915	15925	27056	27056					0.12034167305523624
KRTARSLAR	9	Unmodified	_KRTARSLAR_					0	0	0		ENST00000587757.5_1_18:13611820-13612183:+|nuORF	ENST00000587757.5_1_18:13611820-13612183:+|nuORF	ENST00000587757.5_1_18:13611820-13612183:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	529.830706	1057.64686	0.67137	0.00035571	3.0281	0.0016044	3.6995	0.0019601	529.8320053991862	32.045	0.64306	32.152	31.802	32.446	0.10707	-0.08322	-0.00020221	NaN	37.812	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116760			23589	14197	15915	15925							0.12034167305523624
KRTDSTEKATE	11	Unmodified	_KRTDSTEKATE_					0	0	0		nc|ENSG00000158987|Q8TEU7-2|RAPGEF6	nc|ENSG00000158987|Q8TEU7-2|RAPGEF6	nc|ENSG00000158987|Q8TEU7-2|RAPGEF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.5498352050781	3	422.549246	1264.62591	1.0448	0.00044147	0.19381	8.1895E-05	1.2386	0.00052337	422.54937475486224	22.6	0.68582	22.181	21.924	22.61	-0.41879					33	15	3	0	0	0	0.69071	1	946	946		33.039	6.976	1	219190			23590	15030	15916	15926	27057	27057					0.004180676246733128
KRTEEGGAAV	10	Unmodified	_KRTEEGGAAV_					0	0	0			REV__ENST00000375787.6_1_6:31696789-31697981:-|nuORF	REV__ENST00000375787.6_1_6:31696789-31697981:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2693786621094	2	509.269813	1016.52507	0.97419	0.00049612	-0.98007	-0.00049912	-0.0058787	-2.9939E-06	509.26916380298894	17.067	0.8777	16.456	16.095	16.972	-0.6107					42	19	4	0	0	0	0.43769	1	214	214		60.972	2.19	1	585550	+		23591	25822	15917	15927	27058	27058					0.017470804324716482
KRTGRARLR	9	Unmodified	_KRTGRARLR_					0	0	0			REV__nc|ENSG00000178878|Q96LR9|APOLD1	REV__nc|ENSG00000178878|Q96LR9|APOLD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	557.9605102539062	2	557.357422	1112.70029	0.79945	0.00044558	0.52209	0.00029099	1.3215	0.00073657	557.3576056809644	18.065	0.37154	17.588	17.378	17.75	-0.47694					10	7	2	0	0	0	0.20789	1	354	354		34.173	0	1	28210	+		23592	30062	15918	15928	27059	27059					0.1484496480800317
KRTICLVVVC	10	Unmodified	_KRTICLVVVC_					0	0	0			REV__ENSG00000144339|ENST00000272771|TMEFF2	REV__ENSG00000144339|ENST00000272771|TMEFF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3296508789062	2	567.330304	1132.64606	-0.468	-0.00026551	-0.11332	-6.4291E-05	-0.58132	-0.0003298	567.330130226139	95.712	2.0668	95.712	95.357	97.424	0					107	47	3	0	0	0	0.86763	1	9520	9520		26.693	2.1737	1	608220	+		23593	19882	15919	15929	27060	27060					0.08503868549951221
KRTICLVVVC	10	Unmodified	_KRTICLVVVC_					0	0	0			REV__ENSG00000144339|ENST00000272771|TMEFF2	REV__ENSG00000144339|ENST00000272771|TMEFF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3297119140625	2	567.330304	1132.64606	1.8589	0.0010546	-2.7656	-0.001569	-0.90667	-0.00051438	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.81018	1	9934	9934		38.806	8.3025	1	15439000	+		23594	19882	15919	15929	27061	27061					0.08503868549951221
KRTICLVVVC	10	Unmodified	_KRTICLVVVC_					0	0	0			REV__ENSG00000144339|ENST00000272771|TMEFF2	REV__ENSG00000144339|ENST00000272771|TMEFF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3301391601562	2	567.330304	1132.64606	1.492	0.00084643	-2.1149	-0.0011999	-0.62297	-0.00035343	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.86763	1	9241	9241		26.693	2.1737	1	5346500	+		23595	19882	15919	15929	27062	27062					0.08503868549951221
KRTICLVVVC	10	Unmodified	_KRTICLVVVC_					0	0	0			REV__ENSG00000144339|ENST00000272771|TMEFF2	REV__ENSG00000144339|ENST00000272771|TMEFF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3294067382812	2	567.330304	1132.64606	-0.50942	-0.00028901	0.92825	0.00052662	0.41883	0.00023761	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.85934	2	10589	10589;10871		35.618	7.5368	1	5685000	+		23596	19882	15919	15929	27063;27064	27063					0.08503868549951221
KRTILSSSLE	10	Unmodified	_KRTILSSSLE_					0	0	0		nc|ENSG00000188107|Q5T1H1|EYS;ENSG00000188107|ENST00000503581|EYS	nc|ENSG00000188107|Q5T1H1|EYS	nc|ENSG00000188107|Q5T1H1|EYS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3306274414062	2	567.32987	1132.64519	-1.3957	-0.00079181	1.5787	0.00089566	0.18306	0.00010386	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.8505	1	9083	9083		19.104	5.6495	1	5956400			23597	15168	15920	15930	27065	27065					0.08417068706262398
KRTKKPPKNL	10	Unmodified	_KRTKKPPKNL_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.92962646484375	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.86551	1	4003	4003		14.694	2.487	1	2612300			23598	2924	15921	15931	27066	27066					0.1756903972204782
KRTLQNQL	8	Unmodified	_KRTLQNQL_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.79864501953125	2	500.79854	999.582528	2.7418	0.0013731	-3.4713	-0.0017384	-0.72955	-0.00036536	500.79706432207496	25.439	1.0282	25.008	24.454	25.482	-0.4311					55	23	5	0	0	0	0.91472	1	1342	1342		44.117	0	1	516210			23599	3510	15922	15932	27067	27067					0.08271967428709104
KRTPELLGSA	10	Unmodified	_KRTPELLGSA_					0	0	0		nc|ENSG00000118156|Q9H0D2-2|ZNF541;ENSG00000118156|ENST00000391901|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.3112182617188	2	536.31148	1070.60841	-1.4967	-0.00080272	1.3487	0.00072334	-0.14801	-7.9378E-05	536.3123630966027	98.254	2.1704	98.45	96.871	99.041	0.19585					82	49	3	0	0	0	0.8545	1	10122	10122		36.447	9.3994	1	235740			23600	3012	15923	15933	27068	27068					0.07592816880332975
KRTPPWLVAPT	11	Unmodified	_KRTPPWLVAPT_					0	0	0			REV__ENST00000383815.7_1_3:9944692-9948114:+|nuORF	REV__ENST00000383815.7_1_3:9944692-9948114:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.58123779296875	3	422.583674	1264.72919	-1.0345	-0.00043717	-2.9464	-0.0012451	-3.9809	-0.0016823	422.582401446262	98.086	2.0202	98.086	97.162	99.182	0					111	48	3	0	0	0	0.69995	1	9871	9871		21.78	4.6137	1	144500	+		23601	25986	15924	15934	27069	27069					0.10741644593804267
KRTPPWLVAPT	11	Unmodified	_KRTPPWLVAPT_					0	0	0			REV__ENST00000383815.7_1_3:9944692-9948114:+|nuORF	REV__ENST00000383815.7_1_3:9944692-9948114:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.58184814453125	3	422.583674	1264.72919	-1.8745	-0.00079214	-2.1511	-0.00090903	-4.0257	-0.0017012	422.58264285495795	97.6	3.2584	97.802	96.488	99.746	0.20206					167	75	4	0	0	0	0.76699	1	10054	10054		11.932	0	1	303430	+		23602	25986	15924	15934	27070	27070					0.10741644593804267
KRTRWWPP	8	Unmodified	_KRTRWWPP_					0	0	0			REV__ENST00000468834.1_1_10:33346877-33346970:-|nuORF	REV__ENST00000468834.1_1_10:33346877-33346970:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.8148803710938	2	563.817067	1125.61958	-0.37723	-0.00021269	-0.17678	-9.9672E-05	-0.55401	-0.00031236	563.8171367706988	53.744	1.0641	53.72	53.305	54.369	-0.02475					38	26	2	0	0	0	0.86288	1	4806	4806		26.796	0.10319	1	113200	+		23603	27188	15925	15935	27071	27071					0.06179683765117261
KRTSAAAK	8	Unmodified	_KRTSAAAK_					0	0	0		ENSG00000032219|ENST00000355431|ARID4A;nc|ENSG00000032219|P29374-3|ARID4A;nc|ENSG00000032219|P29374-2|ARID4A	ENSG00000032219|ENST00000355431|ARID4A	ENSG00000032219|ENST00000355431|ARID4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	416.7552795410156	2	416.753601	831.49265	1.9074	0.00079493	1.7119	0.00071344	3.6193	0.0015084	416.7541521342465	69.418	0.4497	69.453	69.176	69.625	0.035622					31	22	2	0	0	0	0.87064	1	6636	6636		29.15	2.3535	1	206530			23604	884	15926	15936	27072	27072					0.07016337820118679
KRTSNGLVAS	10	Unmodified	_KRTSNGLVAS_					0	0	0			REV__nc|ENSG00000106331|O43316-2|PAX4	REV__nc|ENSG00000106331|O43316-2|PAX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.793701171875	2	516.793455	1031.57236	1.5571	0.00080467	-1.5393	-0.0007955	0.017752	9.1739E-06	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.82886	1	9175	9175		37.812	3.639	1	834930	+		23605	29764	15927	15937	27073	27073					0.057833597034687045
KRTTNEALL	9	Unmodified	_KRTTNEALL_					0	0	0			REV__ENST00000594688.1_1_19:42929068-42929311:+|nuORF	REV__ENST00000594688.1_1_19:42929068-42929311:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3032836914062	2	523.303655	1044.59276	-0.041206	-2.1563E-05	-0.13765	-7.2034E-05	-0.17886	-9.3597E-05	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.76764	1	8889	8889		34.173	2.6427	1	12431000	+		23606	29230	15928	15938	27074	27074					0.07224530363282611
KRTVKKVVTH	10	Unmodified	_KRTVKKVVTH_					0	0	0			REV__ENSG00000145362|ENST00000357077|ANK2	REV__ENSG00000145362|ENST00000357077|ANK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.3819580078125	2	598.385314	1194.75608	-2.4045	-0.0014388	-4.123	-0.0024671	-6.5275	-0.0039059	598.3827122218626	40.848	1.3552	40.855	40.235	41.59	0.0065727					86	35	3	0	0	0	0.86047	1	2964	2964		23.523	0.94304	1	583190	+		23607	19942	15929	15939	27075	27075					0.16648753204981404
KRTVLLVRSAP	11	Unmodified	_KRTVLLVRSAP_					0	0	0			REV__ENST00000603885.5_1_3:46966981-47017871:-|nuORF	REV__ENST00000603885.5_1_3:46966981-47017871:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.9327392578125	3	413.934706	1238.78229	-1.8077	-0.00074828	-2.9541	-0.0012228	-4.7618	-0.0019711	413.9334753019912	44.718	2.8382	44.718	44.154	46.992	0					147	70	3	0	0	0	0.75457	1	3234	3234		21.032	1.0018	1	588320	+		23608	29351	15930	15940	27076	27076					0.17245022376482666
KRTVRMPHQL	10	Unmodified	_KRTVRMPHQL_					0	0	0		nc|ENSG00000144908|O75891-2|ALDH1L1;ENSG00000144908|ENST00000393434|ALDH1L1;nc|ENSG00000144908|O75891-3|ALDH1L1;nc|ENSG00000144908|O75891-4|ALDH1L1;ENST00000473607.5_1_3:125854214-125879740:-|nuORF	nc|ENSG00000144908|O75891-2|ALDH1L1	nc|ENSG00000144908|O75891-2|ALDH1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.58154296875	3	422.580158	1264.71864	2.2204	0.0009383	2.1029	0.00088864	4.3233	0.0018269	422.58094622121547	97.769	3.2395	97.714	96.802	100.04	-0.055542					208	75	4	0	0	0	0.86207	1	10530	10530		24.232	2.4514	1	525770			23609	4743	15931	15941	27077	27077					0.09687338667731638
KRTVTRILPDP	11	Unmodified	_KRTVTRILPDP_					0	0	0		ENSG00000166716|ENST00000560079|ZNF592	ENSG00000166716|ENST00000560079|ZNF592	ENSG00000166716|ENST00000560079|ZNF592	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3927001953125	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75164	1	12654	12654		21.686	0.73882	1	2297700			23610	6223	15932	15942	27078	27078					0.13652414651210165
KRTVYVYLE	9	Unmodified	_KRTVYVYLE_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.82958984375	2	585.829506	1169.64446	-0.92321	-0.00054084	2.3767	0.0013923	1.4535	0.00085149	585.8307293050794	57.888	1.4017	57.888	57.479	58.881	0					105	56	3	0	0	0	0.76255	1	5095	5095		35.618	7.736	1	164040			23611	1975	15933	15943	27079	27079					0.06642274057162467
KRVAVLAL	8	Unmodified	_KRVAVLAL_					0	0	0			REV__ENSG00000080493|ENST00000264485|SLC4A4	REV__ENSG00000080493|ENST00000264485|SLC4A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.30010986328125	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.81724	1	6910	6910		14.664	0.88877	1	1072400	+		23612	16801	15934	15944	27080	27080					0.14627262273359065
KRVAVLAL	8	Unmodified	_KRVAVLAL_					0	0	0			REV__ENSG00000080493|ENST00000264485|SLC4A4	REV__ENSG00000080493|ENST00000264485|SLC4A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3002014160156	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.82464	1	6906	6906		21.702	0	1	1921500	+		23613	16801	15934	15944	27081	27081					0.14627262273359065
KRVAVPNG	8	Unmodified	_KRVAVPNG_					0	0	0		ENSG00000100354|ENST00000454349|TNRC6B;nc|ENSG00000100354|Q9UPQ9-1|TNRC6B;nc|ENSG00000100354|Q9UPQ9-2|TNRC6B	ENSG00000100354|ENST00000454349|TNRC6B	ENSG00000100354|ENST00000454349|TNRC6B	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.75494384765625	2	420.756144	839.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.559	1	21.116	20.616	21.616	-0.44324								0	0	0	0.30784	1	791	791		14.664	0	1				23614	1833	15935	15945	27082	27082					0.07156641682752252
KRVEQGPN	8	Unmodified	_KRVEQGPN_					0	0	0			REV__nc|ENSG00000140987|Q9NX65-3|ZSCAN32	REV__nc|ENSG00000140987|Q9NX65-3|ZSCAN32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2539978027344	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.91977	1	8572	8572		45.952	5.3793	1	1578600	+		23615	19653	15936	15946	27083	27083					0.027191324691898444
KRVFMPVLA	9	Unmodified	_KRVFMPVLA_					0	0	0			REV__ENSG00000127948|ENST00000461988|POR	REV__ENSG00000127948|ENST00000461988|POR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.82080078125	2	530.82043	1059.62631	0.64608	0.00034295	0.13277	7.0476E-05	0.77885	0.00041343	530.820506018963	80.205	1.3856	80.261	79.781	81.166	0.055916					85	34	3	0	0	0	0.76996	3	7933	7933;7972;7985		33.516	4.3455	1	627060	+		23616	18754	15937	15947	27084;27085;27086	27084					0.09887860601497778
KRVFMPVLA	9	Unmodified	_KRVFMPVLA_					0	0	0			REV__ENSG00000127948|ENST00000461988|POR	REV__ENSG00000127948|ENST00000461988|POR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8203735351562	2	530.82043	1059.62631	-1.2397	-0.00065807	2.0603	0.0010936	0.82054	0.00043556	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.76996	1	7588	7588		33.516	10.473	1	869100	+		23617	18754	15937	15947	27087	27087					0.09887860601497778
KRVGAKRPPN	10	Unmodified	_KRVGAKRPPN_					0	0	0		chrX:279185-284167|15|13.8|0.0|20.4|+|2|TE_info:LTR7C,LTR7C_dup154,ERV1,LTR,donor,-,278908,279185|None,PLCXD1|1;chrX:279185-281482|19|12.47|0.0|20.25|+|2|TE_info:LTR7C,LTR7C_dup154,ERV1,LTR,donor,-,278908,279185|None,PLCXD1|1	chrX:279185-284167|15|13.8|0.0|20.4|+|2|TE_info:LTR7C,LTR7C_dup154,ERV1,LTR,donor,-,278908,279185|None,PLCXD1|1	chrX:279185-284167|15|13.8|0.0|20.4|+|2|TE_info:LTR7C,LTR7C_dup154,ERV1,LTR,donor,-,278908,279185|None,PLCXD1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	561.8460693359375	2	561.846356	1121.67816	-1.4136	-0.0007942	0.29387	0.00016511	-1.1197	-0.00062909	561.8463779100821	96.764	2.3842	96.966	96.53	98.914	0.20207					113	54	4	0	0	0	0.86763	1	9912	9912		26.693	1.1189	1	806770			23618	548	15938	15948	27088	27088					0.12218740339608303
KRVGVVPGSA	10	Unmodified	_KRVGVVPGSA_					0	0	0			REV__nc|ENSG00000149474|Q9H8E8-2|KAT14	REV__nc|ENSG00000149474|Q9H8E8-2|KAT14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.2956237792969	2	485.295633	968.576714	-0.088257	-4.2831E-05	-0.28091	-0.00013633	-0.36917	-0.00017916	485.2954418290789	102.36	1.2851	102.38	101.77	103.06	0.01989					44	30	2	0	0	0	0.86218	1	10966	10966		32.812	4.9302	1	311730	+		23619	20169	15939	15949	27089	27089					0.09116868917044485
KRVGVVPGSA	10	Unmodified	_KRVGVVPGSA_					0	0	0			REV__nc|ENSG00000149474|Q9H8E8-2|KAT14	REV__nc|ENSG00000149474|Q9H8E8-2|KAT14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	485.2956848144531	2	485.295633	968.576714	-1.6628	-0.00080696	1.3091	0.00063529	-0.35374	-0.00017167	485.2962302865475	102.17	1.1411	102.31	101.84	102.98	0.13569					40	27	2	0	0	0	0.80179	1	10721	10721		39.253	13.679	1	544800	+		23620	20169	15939	15949	27090	27090					0.09116868917044485
KRVHSHKKIKR	11	Unmodified	_KRVHSHKKIKR_					0	0	0		ENST00000480924.3_1_12:87563815-87564172:-|nuORF	ENST00000480924.3_1_12:87563815-87564172:-|nuORF	ENST00000480924.3_1_12:87563815-87564172:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.9708557128906	3	472.972266	1415.89497	-0.95095	-0.00044977	-1.8197	-0.00086067	-2.7707	-0.0013104	472.971385713144	49.546	3.8081	49.55	48.972	52.78	0.0035973					232	95	4	0	0	0	0.79716	1	4197	4197		11.932	0	1	1400600			23621	12448	15940	15950	27091	27091					0.20365715893149172
KRVHSHKKIKR	11	Unmodified	_KRVHSHKKIKR_					0	0	0		ENST00000480924.3_1_12:87563815-87564172:-|nuORF	ENST00000480924.3_1_12:87563815-87564172:-|nuORF	ENST00000480924.3_1_12:87563815-87564172:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.3041076660156	3	472.972266	1415.89497	-0.61443	-0.00029061	-2.1783	-0.0010303	-2.7927	-0.0013209	472.9711500191985	46.191	1.1241	46.663	46.09	47.214	0.4714					97	27	5	0	0	0	0.79476	1	4391	4391		12.433	3.221	1	6530400			23622	12448	15940	15950	27092	27092					0.20365715893149172
KRVIKDTLRLD	11	Unmodified	_KRVIKDTLRLD_					0	0	0			REV__ENSG00000029639|ENST00000367166|TFB1M	REV__ENSG00000029639|ENST00000367166|TFB1M	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.94830322265625	3	452.948904	1355.82488	-1.7681	-0.00080086	0.46272	0.00020959	-1.3054	-0.00059127	452.9490232633925	106.96	1.0839	107.01	106.56	107.64	0.053757					98	25	5	0	0	0	0.68431	1	11418	11418		34.087	9.0187	1	4103500	+		23623	16270	15941	15951	27093	27093					0.16120372714044606
KRVIKHIP	8	Unmodified	_KRVIKHIP_					0	0	0			REV__nc|ENSG00000162711|Q96P20-3|NLRP3	REV__nc|ENSG00000162711|Q96P20-3|NLRP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.8329162597656	2	495.832186	989.649819	0.22087	0.00010952	4.1686	0.0020669	4.3895	0.0021765	495.83424949571145	39.993	1.2825	39.962	39.281	40.563	-0.030514					47	32	2	0	0	0	0.82419	1	2782	2782		13.775	4.953	1	101230	+		23624	20838	15942	15952	27094	27094					0.15458042430316254
KRVKGWWPLLA	11	Unmodified	_KRVKGWWPLLA_					0	0	0		nc|ENSG00000115155|Q9HC10-5|OTOF;ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-2|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9429016113281	3	451.943313	1352.80811	-1.6861	-0.00076203	1.515	0.00068469	-0.17112	-7.7337E-05	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.73621	1	4421	4421		25.126	6.5949	1	792670			23625	2814;14858	15943	15953	27095	27095					0.14581916618772084
KRVKIKIFK	9	Unmodified	_KRVKIKIFK_					0	0	0		chr4:82829058-82840857|21|25.14|0.38|6.06|-|1|TE_info:Tigger3b,Tigger3b_dup1669,TcMar-Tigger,DNA,donor,-,82840857,82841122|SEC31A,None|2	chr4:82829058-82840857|21|25.14|0.38|6.06|-|1|TE_info:Tigger3b,Tigger3b_dup1669,TcMar-Tigger,DNA,donor,-,82840857,82841122|SEC31A,None|2	chr4:82829058-82840857|21|25.14|0.38|6.06|-|1|TE_info:Tigger3b,Tigger3b_dup1669,TcMar-Tigger,DNA,donor,-,82840857,82841122|SEC31A,None|2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	580.56005859375	2	580.405518	1158.79648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.164	1	75.164	74.664	75.664	0								0	0	0	0.35896	1	6799	6799		12.207	10.879	1				23626	434	15944	15954	27096	27096					0.22343719595369294
KRVKSKPANPN	11	Unmodified	_KRVKSKPANPN_					0	0	0			REV__nc|ENSG00000189007|Q7Z6V5-2|ADAT2	REV__nc|ENSG00000189007|Q7Z6V5-2|ADAT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8692016601562	2	619.870028	1237.7255	-0.30615	-0.00018977	-0.58957	-0.00036546	-0.89572	-0.00055523	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.61369	1	10267	10267		42.864	10.909	1	4796900	+		23627	23055	15945	15955	27097	27097					0.11614974819940471
KRVKSKPANPN	11	Unmodified	_KRVKSKPANPN_					0	0	0			REV__nc|ENSG00000189007|Q7Z6V5-2|ADAT2	REV__nc|ENSG00000189007|Q7Z6V5-2|ADAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8693237304688	2	619.870028	1237.7255	1.2689	0.00078657	-2.206	-0.0013675	-0.93712	-0.00058089	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.70737	1	9797	9797		30.318	3.6248	1	6493200	+		23628	23055	15945	15955	27098	27098					0.11614974819940471
KRVKSKPANPN	11	Unmodified	_KRVKSKPANPN_					0	0	0			REV__nc|ENSG00000189007|Q7Z6V5-2|ADAT2	REV__nc|ENSG00000189007|Q7Z6V5-2|ADAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8690185546875	2	619.870028	1237.7255	0.87762	0.00054401	-1.8204	-0.0011284	-0.94278	-0.0005844	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.74763	1	9765	9765		22.58	1.6327	1	6574700	+		23629	23055	15945	15955	27099	27099					0.11614974819940471
KRVKWRGQVR	10	Unmodified	_KRVKWRGQVR_					0	0	0			REV__ENSG00000129988|ENST00000217407|LBP	REV__ENSG00000129988|ENST00000217407|LBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2730712890625	3	438.273945	1311.80001	-1.4634	-0.00064136	-0.90938	-0.00039856	-2.3728	-0.0010399	438.2734550831373	106.96	1.4325	107.1	106.6	108.03	0.14105					150	35	5	0	0	0	0.86225	1	11553	11553		32.751	0.71641	1	5372900	+		23630	18840	15946	15956	27100	27100					0.15657782421953925
KRVLFTIDM	9	Unmodified	_KRVLFTIDM_					0	0	0			REV__chr1:175018576-175020478|18|13.33|0.66|4.33|-|2|MRPS14,None|1	REV__chr1:175018576-175020478|18|13.33|0.66|4.33|-|2|MRPS14,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.8223266601562	2	561.820627	1121.6267	0.53348	0.00029972	4.2966	0.0024139	4.8301	0.0027137	561.8229269786879	17.7	0.15406	17.079	16.993	17.147	-0.62141					9	3	3	0	0	0	0.78983	1	301	301		27.882	1.1893	1	89296	+		23631	15433	15947	15957	27101	27101					0.07075235530692225
KRVLFTIDM	9	Unmodified	_KRVLFTIDM_					0	0	0			REV__chr1:175018576-175020478|18|13.33|0.66|4.33|-|2|MRPS14,None|1	REV__chr1:175018576-175020478|18|13.33|0.66|4.33|-|2|MRPS14,None|1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	561.820627	1121.6267	1.0484	0.00058902	3.9492	0.0022188	4.9976	0.0028078	561.8227340050312	17.582	0.24776	17.1	16.944	17.192	-0.48256	0.010546	-0.00022828	NaN	27.882	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50659	+		23632	15433	15947	15957							0.07075235530692225
KRVLFTIDM	9	Unmodified	_KRVLFTIDM_					0	0	0			REV__chr1:175018576-175020478|18|13.33|0.66|4.33|-|2|MRPS14,None|1	REV__chr1:175018576-175020478|18|13.33|0.66|4.33|-|2|MRPS14,None|1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	561.820627	1121.6267	0.53348	0.00029972	4.2966	0.0024139	4.8301	0.0027137	561.8229269786879	17.7	0.15406	17.079	16.993	17.147	-0.62141	-0.010546	0.00016211	NaN	27.882	9	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89296	+		23633	15433	15947	15957							0.07075235530692225
KRVLVLEQH	9	Unmodified	_KRVLVLEQH_					0	0	0		ENST00000490291.1_1_2:85578731-85581633:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000490291.1_1_2:85578731-85581633:-|nuORF	ENST00000490291.1_1_2:85578731-85581633:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3416748046875	2	561.343115	1120.67168	1.1026	0.00061892	-3.1932	-0.0017925	-2.0906	-0.0011735	561.3410646410339	18.065	0.59872	17.588	17.198	17.796	-0.47694					21	12	2	0	0	0	0.44421	1	331	331		54.776	19.158	1	175320			23634	937	15948	15958	27102	27102					0.11616802388221004
KRVPTSTNQRP	11	Unmodified	_KRVPTSTNQRP_					0	0	0			REV__nc|ENSG00000186260|Q9ULH7-4|MRTFB	REV__nc|ENSG00000186260|Q9ULH7-4|MRTFB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.3635864257812	2	642.362567	1282.71058	1.6043	0.0010305	-1.5853	-0.0010183	0.018972	1.2187E-05	642.3621659530644	110.8	0.90775	110.92	110.61	111.52	0.11658					128	36	4	0	0	0	0.65746	1	11898	11898		37.812	0	1	486380	+		23635	22839	15949	15959	27103	27103					0.08053482951913793
KRVRALLG	8	Unmodified	_KRVRALLG_					0	0	0		ENSG00000115808|ENST00000263918|STRN;ENST00000495595.1_1_2:37111179-37129881:-|nuORF;nc|ENSG00000115808|O43815-2|STRN	ENSG00000115808|ENST00000263918|STRN	ENSG00000115808|ENST00000263918|STRN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79315185546875	2	456.808711	911.602869	1.3686	0.00062521	-0.31096	-0.00014205	1.0577	0.00048316	456.8087847012348	35.756	0.18357	36.196	36.112	36.295	0.44043					6	4	2	0	0	0	0.4196	1	2787	2787		62.978	20.504	1	50517			23636	2873	15950	15960	27104	27104					0.14353182879187898
KRVRINFSN	9	Unmodified	_KRVRINFSN_					0	0	0		nc|ENSG00000159200|P53805-3|RCAN1;nc|ENSG00000159200|P53805-2|RCAN1;ENSG00000159200|ENST00000313806|RCAN1	nc|ENSG00000159200|P53805-3|RCAN1	nc|ENSG00000159200|P53805-3|RCAN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.330539	1132.64652	0.4851	0.00027521	-1.8618	-0.0010563	-1.3767	-0.00078107	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.78058	1	9534	9534		30.504	2.6214	1	18558000			23637	5514	15951	15961	27105	27105					0.0855074758567298
KRVTSFFK	8	Unmodified	_KRVTSFFK_					0	0	0			REV__ENSG00000175931|ENST00000319380|UBE2O	REV__ENSG00000175931|ENST00000319380|UBE2O	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.80084228515625	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.546	1	42.546	42.046	43.046	0								0	0	0	0.29344	1	2957	2957		31.955	2.1133	1		+		23638	22092	15952	15962	27106	27106					0.08122056922422871
KRVTSFFK	8	Unmodified	_KRVTSFFK_					0	0	0			REV__ENSG00000175931|ENST00000319380|UBE2O	REV__ENSG00000175931|ENST00000319380|UBE2O	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8002014160156	2	506.800552	1011.58655	-0.65008	-0.00032946	1.6125	0.00081723	0.96246	0.00048778	506.8012923744614	46.783	1.6998	46.754	45.886	47.586	-0.028782					74	44	2	0	0	0	0.87064	1	3820	3820		29.15	4.9468	1	223510	+		23639	22092	15952	15962	27107	27107					0.08122056922422871
KRVTSSRRA	9	Unmodified	_KRVTSSRRA_					0	0	0			REV__ENSG00000266028|ENST00000573034|SRGAP2	REV__ENSG00000266028|ENST00000573034|SRGAP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8209228515625	2	530.820338	1059.62612	-0.85099	-0.00045172	2.1722	0.001153	1.3212	0.0007013	530.8213432265311	82.745	2.1308	82.745	82.264	84.395	0					134	52	5	0	0	0	0.77244	1	7709	7709		32.812	7.2384	1	4119600	+		23640	23961	15953	15963	27108	27108					0.09869576925848378
KRVTSSRRA	9	Unmodified	_KRVTSSRRA_					0	0	0			REV__ENSG00000266028|ENST00000573034|SRGAP2	REV__ENSG00000266028|ENST00000573034|SRGAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.821044921875	2	530.820338	1059.62612	1.1117	0.00059012	0.0073447	3.8987E-06	1.1191	0.00059402	530.8202358745281	82.61	1.5277	82.544	82.018	83.546	-0.066185					83	35	4	0	0	0	0.64555	1	8352	8352		44.377	7.2181	1	1339600	+		23641	23961	15953	15963	27109	27109					0.09869576925848378
KRVTSSRRA	9	Unmodified	_KRVTSSRRA_					0	0	0			REV__ENSG00000266028|ENST00000573034|SRGAP2	REV__ENSG00000266028|ENST00000573034|SRGAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.820556640625	2	530.820338	1059.62612	0.78062	0.00041437	0.37079	0.00019682	1.1514	0.00061119	530.820404965767	82.475	1.248	82.534	82.031	83.279	0.059166					76	28	4	0	0	0	0.69624	1	8239	8239		40.778	10.275	1	1356800	+		23642	23961	15953	15963	27110	27110					0.09869576925848378
KRVTSSRRA	9	Unmodified	_KRVTSSRRA_					0	0	0			REV__ENSG00000266028|ENST00000573034|SRGAP2	REV__ENSG00000266028|ENST00000573034|SRGAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8209228515625	2	530.820338	1059.62612	-0.074689	-3.9646E-05	1.3197	0.0007005	1.245	0.00066085	530.8208962267565	82.295	1.0035	82.45	81.96	82.964	0.15474					78	23	4	0	0	0	0.77266	1	7921	7921		32.751	0.79567	1	1979200	+		23643	23961	15953	15963	27111	27111					0.09869576925848378
KRVTSSRRA	9	Unmodified	_KRVTSSRRA_					0	0	0			REV__ENSG00000266028|ENST00000573034|SRGAP2	REV__ENSG00000266028|ENST00000573034|SRGAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.820556640625	2	530.820338	1059.62612	0.64668	0.00034327	0.45991	0.00024413	1.1066	0.0005874	530.8205589668217	80.04	1.1775	80.181	79.815	80.992	0.14118					115	43	3	0	0	0	0.7932	1	7636	7636		25.574	1.0549	1	892800	+		23644	23961	15953	15963	27112	27112					0.09869576925848378
KRVTSSRRA	9	Unmodified	_KRVTSSRRA_					0	0	0			REV__ENSG00000266028|ENST00000573034|SRGAP2	REV__ENSG00000266028|ENST00000573034|SRGAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8206787109375	2	530.820338	1059.62612	-1.3153	-0.00069821	1.9879	0.0010552	0.67252	0.00035699	530.821502391275	82.322	1.7995	82.448	81.931	83.731	0.12601					101	41	4	0	0	0	0.77244	2	7855	7843;7855		32.812	3.6795	1	1875200	+		23645	23961	15953	15963	27113;27114	27114					0.09869576925848378
KRVVLPLAETQ	11	Unmodified	_KRVVLPLAETQ_					0	0	0			REV__ENSG00000117707|ENST00000366958|PROX1	REV__ENSG00000117707|ENST00000366958|PROX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.8851928710938	2	627.382437	1252.75032	-0.21901	-0.00013741	0.4198	0.00026338	0.20079	0.00012597	627.38251010406	118.49	0.49898	118.41	118.19	118.69	-0.07531					43	18	3	0	0	0	0.73893	1	12742	12742		24.519	3.682	1	1699700	+		23646	18278	15954	15964	27115	27115					0.1340560990265658
KRVVLPLAETQ	11	Unmodified	_KRVVLPLAETQ_					0	0	0			REV__ENSG00000117707|ENST00000366958|PROX1	REV__ENSG00000117707|ENST00000366958|PROX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.384521484375	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.75921	1	12515	12515		19.997	0.89325	1	19815000	+		23647	18278	15954	15964	27116	27116					0.1340560990265658
KRVVNAGH	8	Unmodified	_KRVVNAGH_					0	0	0		ENST00000369161.3_1:149813728-149813854:-|nuORF	ENST00000369161.3_1:149813728-149813854:-|nuORF	ENST00000369161.3_1:149813728-149813854:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.75628662109375	2	440.759218	879.503883	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.97	1	60.978	60.478	61.478	0.0081177								0	0	0	0.29498	1	5306	5306		26.796	1.3459	1				23648	10613	15955	15965	27117	27117					0.05931159914280215
KRVVTDKH	8	Unmodified	_KRVVTDKH_					0	0	0		ENSG00000162040|ENST00000454677|HS3ST6	ENSG00000162040|ENST00000454677|HS3ST6	ENSG00000162040|ENST00000454677|HS3ST6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7960510253906	2	491.793258	981.571963	0.72275	0.00035544	4.2539	0.002092	4.9766	0.0024475	491.79524952616435	50.532	2.1367	51.283	50.465	52.601	0.75174					133	51	3	0	0	0	0.90523	1	5026	5026		40.778	8.8233	1	1359500			23649	5664	15956	15966	27118	27118					0.08043984774280943
KRVYLKPK	8	Unmodified	_KRVYLKPK_					0	0	0		ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.339844	1030.66514	-0.68685	-0.00035465	0.89502	0.00046214	0.20818	0.00010749	516.340001651683	99.368	0.16894	99.368	99.262	99.431	0					5	3	2	0	0	0	0.4196	1	10030	10030		11.511	0	1	79084			23650	7840	15957	15967	27119	27119					0.1510290922749391
KRWEVPAAKRL	11	Unmodified	_KRWEVPAAKRL_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9432678222656	3	451.941973	1352.80409	0.3266	0.00014761	2.2075	0.00099765	2.5341	0.0011453	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.75457	1	4292	4292		21.032	2.5012	1	721610	+		23651	20385	15958	15968	27120	27120					0.1417982712500816
KRWGLALL	8	Unmodified	_KRWGLALL_					0	0	0		ENST00000360150.8_1_12:29491470-29491608:-|nuORF	ENST00000360150.8_1_12:29491470-29491608:-|nuORF	ENST00000360150.8_1_12:29491470-29491608:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8070373535156	2	478.805637	955.596721	-2.669	-0.0012779	3.4642	0.0016587	0.7952	0.00038075	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.86791	1	2599	2599		28.254	1.4582	1	370420			23652	10442	15959	15969	27121	27121					0.11714664647661266
KRWGLALL	8	Unmodified	_KRWGLALL_					0	0	0		ENST00000360150.8_1_12:29491470-29491608:-|nuORF	ENST00000360150.8_1_12:29491470-29491608:-|nuORF	ENST00000360150.8_1_12:29491470-29491608:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8085021972656	2	478.805637	955.596721	-0.025303	-1.2115E-05	0.1733	8.2978E-05	0.148	7.0862E-05	478.80566496431277	41.493	1.1693	41.447	40.834	42.003	-0.045471					50	34	2	0	0	0	0.86791	1	2719	2719		28.254	0.37203	1	322860			23653	10442	15959	15969	27122	27122					0.11714664647661266
KRWLINVF	8	Unmodified	_KRWLINVF_					0	0	0			REV__ENST00000534313.5_1_11:65418276-65418372:+|nuORF	REV__ENST00000534313.5_1_11:65418276-65418372:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3263549804688	2	538.324194	1074.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.4	1	113.43	112.93	113.93	0.027321								0	0	0	0.30125	1	12390	12390		20.482	3.1169	1		+		23654	28365	15960	15970	27123	27123					0.09950336193401199
KRWLLEAP	8	Unmodified	_KRWLLEAP_					0	0	0			REV__ENST00000416204.1_1_2:242913570-242913898:+|nuORF	REV__ENST00000416204.1_1_2:242913570-242913898:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.79852294921875	2	506.800552	1011.58655	0.018043	9.144E-06	1.4105	0.00071482	1.4285	0.00072396	506.80125221893354	53.037	1.9797	53.034	52.291	54.271	-0.0033035					105	54	3	0	0	0	0.884	1	4577	4577		33.516	6.7195	1	173240	+		23655	26431	15961	15971	27124	27124					0.08122056922411502
KRWLLEAP	8	Unmodified	_KRWLLEAP_					0	0	0			REV__ENST00000416204.1_1_2:242913570-242913898:+|nuORF	REV__ENST00000416204.1_1_2:242913570-242913898:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.79913330078125	2	506.800552	1011.58655	-1.1816	-0.00059884	1.4736	0.00074682	0.29199	0.00014798	506.8012726682809	44.534	3.0875	44.53	42.489	45.577	-0.0041618					139	73	2	0	0	0	0.884	1	3354	3354		33.516	1.5607	1	459990	+		23656	26431	15961	15971	27125	27125					0.08122056922411502
KRWLLEAP	8	Unmodified	_KRWLLEAP_					0	0	0			REV__ENST00000416204.1_1_2:242913570-242913898:+|nuORF	REV__ENST00000416204.1_1_2:242913570-242913898:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.79925537109375	2	506.800552	1011.58655	0.37466	0.00018988	0.80424	0.00040759	1.1789	0.00059746	506.8009308799893	52.874	1.5356	52.945	51.808	53.344	0.070713					73	47	2	0	0	0	0.87479	1	4307	4307		30.504	7.4612	1	186720	+		23657	26431	15961	15971	27126	27126					0.08122056922411502
KRWLLEAP	8	Unmodified	_KRWLLEAP_					0	0	0			REV__ENST00000416204.1_1_2:242913570-242913898:+|nuORF	REV__ENST00000416204.1_1_2:242913570-242913898:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8022155761719	2	506.800552	1011.58655	-0.28255	-0.0001432	1.9422	0.00098432	1.6597	0.00084112	506.80140373255165	50.862	1.8071	50.77	50.35	52.158	-0.091797					82	54	2	0	0	0	0.89962	1	4091	4091		38.806	5.2906	1	131380	+		23658	26431	15961	15971	27127	27127					0.08122056922411502
KRWPKYRLPI	10	Unmodified	_KRWPKYRLPI_					0	0	0		ENST00000416144.5_1_7:99160096-99161679:+|nuORF;nc|ENSG00000197343|Q8N720-4|ZNF655;ENST00000422422.5_1_7:99158252-99161679:+|nuORF;ENST00000467680.5_1_7:99159903-99161679:+|nuORF;nc|ENSG00000197343|Q8N720-2|ZNF655	ENST00000416144.5_1_7:99160096-99161679:+|nuORF	ENST00000416144.5_1_7:99160096-99161679:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.9483947753906	3	452.946946	1355.81901	2.7606	0.0012504	0.42331	0.00019174	3.1839	0.0014422	452.94702271290186	107.29	1.0208	107.26	106.62	107.64	-0.034134					78	23	5	0	0	0	0.85633	1	11928	11928		21.686	2.4231	1	3060000			23659	11391	15962	15972	27128	27128					0.15533318993038847
KRWPKYRLPI	10	Unmodified	_KRWPKYRLPI_					0	0	0		ENST00000416144.5_1_7:99160096-99161679:+|nuORF;nc|ENSG00000197343|Q8N720-4|ZNF655;ENST00000422422.5_1_7:99158252-99161679:+|nuORF;ENST00000467680.5_1_7:99159903-99161679:+|nuORF;nc|ENSG00000197343|Q8N720-2|ZNF655	ENST00000416144.5_1_7:99160096-99161679:+|nuORF	ENST00000416144.5_1_7:99160096-99161679:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.94830322265625	3	452.946946	1355.81901	-1.1932	-0.00054047	3.9359	0.0017827	2.7426	0.0012423	452.9486366147782	106.8	1.2296	106.95	106.47	107.7	0.14843					124	29	6	0	0	0	0.85834	1	11512	11512		22.58	2.5492	1	8171700			23660	11391	15962	15972	27129	27129					0.15533318993038847
KRWPKYRLPI	10	Unmodified	_KRWPKYRLPI_					0	0	0		ENST00000416144.5_1_7:99160096-99161679:+|nuORF;nc|ENSG00000197343|Q8N720-4|ZNF655;ENST00000422422.5_1_7:99158252-99161679:+|nuORF;ENST00000467680.5_1_7:99159903-99161679:+|nuORF;nc|ENSG00000197343|Q8N720-2|ZNF655	ENST00000416144.5_1_7:99160096-99161679:+|nuORF	ENST00000416144.5_1_7:99160096-99161679:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.9481506347656	3	452.946946	1355.81901	0.75693	0.00034285	2.1961	0.00099472	2.953	0.0013376	452.94782570061545	106.9	1.1199	106.99	106.6	107.72	0.091255					115	26	5	0	0	0	0.86698	1	11466	11466		28.081	4.7036	1	5690500			23661	11391	15962	15972	27130	27130					0.15533318993038847
KRWTWRTIFYR	11	Unmodified	_KRWTWRTIFYR_					0	0	0		ENST00000437348.5_1_11:31115730-31149186:-|nuORF	ENST00000437348.5_1_11:31115730-31149186:-|nuORF	ENST00000437348.5_1_11:31115730-31149186:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3267211914062	3	538.30016	1611.87865	1.2452	0.0006703	-3.7998	-0.0020454	-2.5546	-0.0013751	538.2978071392707	100.98	0.56869	101.03	100.65	101.22	0.046349					16	13	2	0	0	0	0.18131	1	10870	10870		12.957	9.9315	1	698630			23662	11737	15963	15973	27131	27131					0.09718589936414901
KRWYILIGV	9	Unmodified	_KRWYILIGV_					0	0	0			REV__ENSG00000106278|ENST00000393386|PTPRZ1	REV__ENSG00000106278|ENST00000393386|PTPRZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3560791015625	2	574.352951	1146.69135	1.1072	0.0006359	3.9967	0.0022955	5.1039	0.0029314	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.7932	1	10790	10790		25.45	1.2474	1	708140	+		23663	17604	15964	15974	27132	27132					0.12387178398989818
KRYAGLLF	8	Unmodified	_KRYAGLLF_					0	0	0		ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.2877502441406	2	484.28982	966.565087	1.9521	0.0009454	-4.1849	-0.0020267	-2.2328	-0.0010813	484.2878988627954	94.608	1.0845	94.548	94.059	95.143	-0.059212					44	25	2	0	0	0	0.82464	1	10106	10106		21.702	1.2205	1	321990			23664	1086	15965	15975	27133	27133					0.08046671893714574
KRYAGLLF	8	Unmodified	_KRYAGLLF_					0	0	0		ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	484.28982	966.565087	-0.9205	-0.00044579	-1.0651	-0.00051582	-1.9856	-0.00096161	484.289486498501	94.904	1.1782	94.904	94.308	95.486	0	0.26718	0.0013805	NaN	21.702	43	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	223130			23665	1086	15965	15975							0.08046671893714574
KRYAGLLF	8	Unmodified	_KRYAGLLF_					0	0	0		ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	484.28982	966.565087	-0.74056	-0.00035865	-3.7851	-0.0018331	-4.5257	-0.0021918	484.289132227991	94.349	1.2268	94.578	94.24	95.467	0.22862	-0.058741	-0.0012541	NaN	21.702	66	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	329080			23666	1086	15965	15975							0.08046671893714574
KRYAGLLF	8	Unmodified	_KRYAGLLF_					0	0	0		ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	484.28982	966.565087	0.73021	0.00035363	-3.3425	-0.0016187	-2.6122	-0.0012651	484.2883769182041	94.456	0.90443	94.619	94.167	95.071	0.16308	-0.017426	-0.00082528	NaN	21.702	37	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	275610			23667	1086	15965	15975							0.08046671893714574
KRYAMVLFRIT	11	Unmodified	_KRYAMVLFRIT_					0	0	0		ENSG00000188394|ENST00000616002|GPR21	ENSG00000188394|ENST00000616002|GPR21	ENSG00000188394|ENST00000616002|GPR21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.6084289550781	3	466.607713	1396.80131	-0.1162	-5.4221E-05	0.76719	0.00035798	0.65099	0.00030376	466.608028235663	100.63	2.2402	100.66	99.377	101.62	0.031036					154	52	4	0	0	0	0.76579	1	10715	10715		18.531	0.69791	1	499520			23668	7927	15966	15976	27134	27134					0.11878235675840187
KRYFRKIKNLI	11	Unmodified	_KRYFRKIKNLI_					0	0	0		ENST00000491950.5_1_X:123480470-123505238:+|nuORF;nc|ENSG00000183918|O60880-4|SH2D1A;ENSG00000183918|ENST00000371139|SH2D1A	ENST00000491950.5_1_X:123480470-123505238:+|nuORF	ENST00000491950.5_1_X:123480470-123505238:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.6488952636719	3	493.648789	1477.92454	-1.6053	-0.00079248	3.142	0.0015511	1.5367	0.00075858	493.6501931782481	44.56	1.836	44.56	43.623	45.459	0					138	44	4	0	0	0	0.81021	2	3211	3200;3211		9.2118	3.3864	1	434870			23669	7574	15967	15977	27135;27136	27136					0.20469235118639517
KRYFRKIKNLI	11	Unmodified	_KRYFRKIKNLI_					0	0	0		ENST00000491950.5_1_X:123480470-123505238:+|nuORF;nc|ENSG00000183918|O60880-4|SH2D1A;ENSG00000183918|ENST00000371139|SH2D1A	ENST00000491950.5_1_X:123480470-123505238:+|nuORF	ENST00000491950.5_1_X:123480470-123505238:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.64971923828125	3	493.648789	1477.92454	0.24426	0.00012058	1.3092	0.00064627	1.5534	0.00076685	493.6494164548298	44.568	2.4513	44.545	43.895	46.346	-0.023079					82	57	2	0	0	0	0.80593	2	3450	3417;3450		10.104	4.1029	1	516410			23670	7574	15967	15977	27137;27138	27138					0.20469235118639517
KRYFRKIKNLI	11	Unmodified	_KRYFRKIKNLI_					0	0	0		ENST00000491950.5_1_X:123480470-123505238:+|nuORF;nc|ENSG00000183918|O60880-4|SH2D1A;ENSG00000183918|ENST00000371139|SH2D1A	ENST00000491950.5_1_X:123480470-123505238:+|nuORF	ENST00000491950.5_1_X:123480470-123505238:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.31866455078125	3	493.648789	1477.92454	-0.87644	-0.00043265	2.6394	0.0013029	1.7629	0.00087027	493.64998188310005	44.669	3.6346	44.636	43.623	47.257	-0.033474					240	86	4	0	0	0	0.81021	2	3499	3499;3594		9.2118	3.2108	1	495450			23671	7574	15967	15977	27139;27140	27139					0.20469235118639517
KRYFRKIKNLI	11	Unmodified	_KRYFRKIKNLI_					0	0	0		ENST00000491950.5_1_X:123480470-123505238:+|nuORF;nc|ENSG00000183918|O60880-4|SH2D1A;ENSG00000183918|ENST00000371139|SH2D1A	ENST00000491950.5_1_X:123480470-123505238:+|nuORF	ENST00000491950.5_1_X:123480470-123505238:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.9832458496094	3	493.648789	1477.92454	0.3003	0.00014824	2.0847	0.0010291	2.385	0.0011774	493.9841677291236	45.426	1.1794	45.469	45.194	46.373	0.042599					76	31	3	0	0	0	0.81021	1	3258	3258		9.2118	2.5522	1	182700			23672	7574	15967	15977	27141	27141					0.20469235118639517
KRYGLYVK	8	Unmodified	_KRYGLYVK_					0	0	0			REV__ENST00000393437.7_2_2:100900079-100900241:-|nuORF	REV__ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8093872070312	2	513.808377	1025.6022	-0.26337	-0.00013532	1.4503	0.00074519	1.187	0.00060987	513.8089696081398	52.202	2.125	52.215	51.482	53.607	0.012436					136	54	4	0	0	0	0.86791	1	4461	4461		28.254	4.0515	1	732880	+		23673	26057	15968	15978	27142	27142					0.0904234343945518
KRYKFQPLK	9	Unmodified	_KRYKFQPLK_					0	0	0			REV__ENSG00000136169|ENST00000611815|SETDB2	REV__ENSG00000136169|ENST00000611815|SETDB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.36767578125	2	604.369133	1206.72371	-1.2751	-0.00077064	-2.39	-0.0014444	-3.6651	-0.0022151	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.72402	2	12455	12455;12532		38.806	13.232	1	3346600	+		23674	19292	15969	15979	27143;27144	27143					0.12861965801971564
KRYNLRKFA	9	Unmodified	_KRYNLRKFA_					0	0	0			REV__ENST00000586500.1_1_19:13993617-13994323:-|nuORF	REV__ENST00000586500.1_1_19:13993617-13994323:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.8565063476562	2	598.356557	1194.69856	1.6651	0.0009963	2.883	0.001725	4.548	0.0027213	598.3583175004217	94.283	4.5904	94.715	93.221	97.812	0.4324					199	114	2	0	0	0	0.77546	1	11139	11139		31.955	0.42505	1	27623000	+		23675	18981	15970	15980	27145	27145					0.10899910999410167
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.2651977539062	3	531.662203	1591.96478	0.013236	7.0372E-06	-2.8952	-0.0015393	-2.882	-0.0015322	531.660551658505	55.072	1.1493	55.065	54.756	55.905	-0.0077095					39	31	2	0	0	0	0.1838	1	4934	4934		6.001	4.5823	1	206480			23676	3223	15971	15981	27146	27146					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.2633056640625	3	531.662203	1591.96478	0.40846	0.00021716	-3.6374	-0.0019339	-3.229	-0.0017167	531.6600830063314	53.607	1.0958	53.689	53.232	54.328	0.081528					64	28	3	0	0	0	0.18343	1	4378	4378		5.4129	2.2016	1	232860			23677	3223	15971	15981	27147	27147					0.19247594561761616
KRYSRGRAL	9	Unmodified	_KRYSRGRAL_					0	0	0		ENST00000480451.1_1_22:17639677-17639998:-|nuORF	ENST00000480451.1_1_22:17639677-17639998:-|nuORF	ENST00000480451.1_1_22:17639677-17639998:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8316650390625	2	553.830706	1105.64686	-0.78325	-0.00043379	0.37135	0.00020567	-0.4119	-0.00022812	553.8307618175877	102.64	0.65639	102.65	102.39	103.05	0.0082016					47	15	4	0	0	0	0.7932	1	10990	10990		24.203	0.68005	1	552570			23678	12437	15972	15982	27148	27148					0.09826167305527633
KSAASIKGI	9	Unmodified	_KSAASIKGI_					0	0	0			REV__ENSG00000165816|ENST00000392982|VWA2	REV__ENSG00000165816|ENST00000392982|VWA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77142333984375	2	437.77146	873.528367	-0.10723	-4.6943E-05	-0.31102	-0.00013615	-0.41825	-0.0001831	437.7713100510169	39.948	1.5972	39.9	38.972	40.569	-0.04789					99	48	4	0	0	0	0.7932	1	2444	2444		14.137	1.9303	1	3032300	+		23679	21224	15973	15983	27149	27149					0.08654375277149029
KSAATKGH	8	Unmodified	_KSAATKGH_					0	0	0			REV__ENSG00000031691|ENST00000335783|CENPQ	REV__ENSG00000031691|ENST00000335783|CENPQ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.22589111328125	2	400.224677	798.434801	0.14684	5.877E-05	4.0547	0.0016228	4.2016	0.0016816	400.2262135733946	35.358	1.7513	35.464	35.171	36.922	0.10604					97	55	2	0	0	0	0.87922	1	1862	1862		31.955	6.5047	1	300980	+		23680	16276	15974	15984	27150	27150					0.027520758947048307
KSAATKGH	8	Unmodified	_KSAATKGH_					0	0	0			REV__ENSG00000031691|ENST00000335783|CENPQ	REV__ENSG00000031691|ENST00000335783|CENPQ	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	400.224677	798.434801	0.14684	5.877E-05	4.0547	0.0016228	4.2016	0.0016816	400.2262135733946	35.358	1.7513	35.464	35.171	36.922	0.10604	-0.022243	-0.00080658	NaN	31.955	97	55	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	300980	+		23681	16276	15974	15984							0.027520758947048307
KSACLLHTVS	10	Unmodified	_KSACLLHTVS_					0	0	0			REV__nc|ENSG00000134294|Q96QD8-2|SLC38A2	REV__nc|ENSG00000134294|Q96QD8-2|SLC38A2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.6329345703125	2	529.786784	1057.55902	-0.16924	-8.966E-05	-2.4604	-0.0013035	-2.6296	-0.0013931	530.2868669909257	39.042	0.23994	39.052	38.882	39.122	0.010708					9	6	2	0	0	0	0.37624	1	2368	2368		14.137	0	1	38552	+		23682	19130	15975	15985	27151	27151					0.03253785599872572
KSAFFKRV	8	Unmodified	_KSAFFKRV_					0	0	0		nc|ENSG00000167632|Q96Q05-3|TRAPPC9;ENSG00000167632|ENST00000438773|TRAPPC9;nc|ENSG00000167632|Q96Q05-2|TRAPPC9	nc|ENSG00000167632|Q96Q05-3|TRAPPC9	nc|ENSG00000167632|Q96Q05-3|TRAPPC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7944641113281	2	491.795269	981.575986	-0.53143	-0.00026136	1.9035	0.00093611	1.372	0.00067476	491.79619139735206	56.69	1.2684	56.664	56.294	57.562	-0.026108					93	62	2	0	0	0	0.81897	2	4779	4779;4785		23.042	2.5607	1	1036100			23683	6310	15976	15986	27152;27153	27152					0.08446074267999393
KSAFFKRV	8	Unmodified	_KSAFFKRV_					0	0	0		nc|ENSG00000167632|Q96Q05-3|TRAPPC9;ENSG00000167632|ENST00000438773|TRAPPC9;nc|ENSG00000167632|Q96Q05-2|TRAPPC9	nc|ENSG00000167632|Q96Q05-3|TRAPPC9	nc|ENSG00000167632|Q96Q05-3|TRAPPC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7972717285156	2	491.795269	981.575986	-1.178	-0.00057935	-0.11787	-5.7967E-05	-1.2959	-0.00063732	491.79505307157757	43.662	1.2118	44.112	43.311	44.523	0.45025					60	29	3	0	0	0	0.82658	1	3953	3953		21.96	0	1	1655700			23684	6310	15976	15986	27154	27154					0.08446074267999393
KSAFFKRV	8	Unmodified	_KSAFFKRV_					0	0	0		nc|ENSG00000167632|Q96Q05-3|TRAPPC9;ENSG00000167632|ENST00000438773|TRAPPC9;nc|ENSG00000167632|Q96Q05-2|TRAPPC9	nc|ENSG00000167632|Q96Q05-3|TRAPPC9	nc|ENSG00000167632|Q96Q05-3|TRAPPC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7961120605469	2	491.795269	981.575986	-1.1725	-0.00057664	2.0381	0.0010023	0.86553	0.00042567	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.85277	1	4395	4395		25.45	0	1	3001500			23685	6310	15976	15986	27155	27155					0.08446074267999393
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3135375976562	2	516.314023	1030.61349	-0.68072	-0.00035146	0.32195	0.00016623	-0.35876	-0.00018524	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.86225	1	10252	10252		32.751	2.2469	1	39641000	+		23686	21675	15977	15987	27156	27156					0.09941120742928433
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3137817382812	2	516.314023	1030.61349	-0.047196	-2.4368E-05	-0.36182	-0.00018681	-0.40901	-0.00021118	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.73395	2	10605	10605;10664		42.864	10.909	1	63062000	+		23687	21675	15977	15987	27157;27158	27157					0.09941120742928433
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.313720703125	2	516.314023	1030.61349	2.7793	0.001435	-3.2178	-0.0016614	-0.43843	-0.00022637	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.85981	2	10707	10707;10851		35.152	3.1972	1	67991000	+		23688	21675	15977	15987	27159;27160	27159					0.09941120742928433
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.314208984375	2	516.314023	1030.61349	3.1012	0.0016012	-3.1554	-0.0016292	-0.054235	-2.8002E-05	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.86047	1	12900	12900		23.523	4.1627	1	1162600	+		23689	21675	15977	15987	27161	27161					0.09941120742928433
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.31396484375	2	516.314023	1030.61349	0.876	0.00045229	-1.3141	-0.00067851	-0.43813	-0.00022621	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.78666	1	10805	10805		40.058	8.1033	1	67025000	+		23690	21675	15977	15987	27162	27162					0.09941120742928433
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3141479492188	2	516.314023	1030.61349	-0.25799	-0.00013321	-0.28251	-0.00014586	-0.5405	-0.00027907	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.63899	3	10406	10240;10312;10406		47.96	10.8	1	82226000	+		23691	21675	15977	15987	27163;27164;27165	27165					0.09941120742928433
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3134765625	2	516.314023	1030.61349	-0.2553	-0.00013181	0.65047	0.00033585	0.39517	0.00020403	516.3144185010789	103.22	1.1465	103.4	103.01	104.15	0.18298					74	28	3	0	0	0	0.86338	1	10894	10894		31.634	1.3165	1	978380	+		23692	21675	15977	15987	27166	27166					0.09941120742928433
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3145751953125	2	516.314023	1030.61349	0.80555	0.00041592	-1.2336	-0.00063695	-0.42809	-0.00022103	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.76096	2	10471	10255;10471		41.427	4.2675	1	72906000	+		23693	21675	15977	15987	27167;27168	27168					0.09941120742928433
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3139038085938	2	516.314023	1030.61349	-1.5618	-0.0008064	1.1232	0.00057995	-0.4386	-0.00022645	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.86106	1	10491	10491		33.922	4.7721	1	66055000	+		23694	21675	15977	15987	27169	27169					0.09941120742928433
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3135375976562	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.85981	7	12141	12141;12191;12255;12404;12662;12749;12879		35.152	8.4591	1	4038100	+		23695	21675	15977	15987	27170;27171;27172;27173;27174;27175;27176	27170					0.09941120742928433
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.314208984375	2	516.314023	1030.61349	1.9037	0.0009829	-1.9331	-0.0009981	-0.029436	-1.5198E-05	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.86225	1	11896	11896		32.751	0.79567	1	22616000	+		23696	21675	15977	15987	27177	27177					0.09941120742928433
KSAKKQLAGT	10	Unmodified	_KSAKKQLAGT_					0	0	0			REV__ENSG00000170613|ENST00000302938|GARIN3	REV__ENSG00000170613|ENST00000302938|GARIN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3138427734375	2	516.314023	1030.61349	1.791	0.00092474	-1.8271	-0.00094338	-0.036105	-1.8641E-05	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.86225	3	11952	11952;12060;12231		32.751	7.1151	1	24820000	+		23697	21675	15977	15987	27178;27179;27180	27178					0.09941120742928433
KSAKRTIL	8	Unmodified	_KSAKRTIL_					0	0	0		nc|ENSG00000188107|Q5T1H1|EYS;ENSG00000188107|ENST00000503581|EYS	nc|ENSG00000188107|Q5T1H1|EYS	nc|ENSG00000188107|Q5T1H1|EYS	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	458.78741455078125	2	458.800552	915.58655	-1.0781	-0.00049462	0.50895	0.00023351	-0.56913	-0.00026112	458.80032578844373	93.347	0.33774	93.347	93.284	93.622	0					10	7	2	0	0	0	0.4196	1	9235	9235		34.173	19.508	1	59580			23698	15168	15978	15988	27181	27181					0.1253805692243759
KSAKRTIL	8	Unmodified	_KSAKRTIL_					0	0	0		nc|ENSG00000188107|Q5T1H1|EYS;ENSG00000188107|ENST00000503581|EYS	nc|ENSG00000188107|Q5T1H1|EYS	nc|ENSG00000188107|Q5T1H1|EYS	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	458.7874450683594	2	458.800552	915.58655	-0.12857	-5.8986E-05	-0.52115	-0.0002391	-0.64972	-0.00029809	458.80031166208545	93.125	0.69659	93.195	92.927	93.624	0.06987					23	16	2	0	0	0	0.4196	1	9700	9700		21.96	0	1	126440			23699	15168	15978	15988	27182	27182					0.1253805692243759
KSAKRTIL	8	Unmodified	_KSAKRTIL_					0	0	0		nc|ENSG00000188107|Q5T1H1|EYS;ENSG00000188107|ENST00000503581|EYS	nc|ENSG00000188107|Q5T1H1|EYS	nc|ENSG00000188107|Q5T1H1|EYS	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7876892089844	2	458.800552	915.58655	-1.1216	-0.00051459	-1.006	-0.00046155	-2.1276	-0.00097614	458.79967318089086	93.11	0.25038	93.336	93.276	93.526	0.22548					7	5	2	0	0	0	0.4196	1	9474	9474		15.642	3.435	1	44722			23700	15168	15978	15988	27183	27183					0.1253805692243759
KSAKRTIL	8	Unmodified	_KSAKRTIL_					0	0	0		nc|ENSG00000188107|Q5T1H1|EYS;ENSG00000188107|ENST00000503581|EYS	nc|ENSG00000188107|Q5T1H1|EYS	nc|ENSG00000188107|Q5T1H1|EYS	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.78729248046875	2	458.800552	915.58655	-1.7491	-0.00080249	-3.9072	-0.0017926	-5.6563	-0.0025951	458.7986214254363	92.932	0.16172	93.124	92.985	93.147	0.19239					8	3	3	0	0	0	0.4196	1	9375	9375		34.173	0	1	141030			23701	15168	15978	15988	27184	27184					0.1253805692243759
KSAPARSY	8	Unmodified	_KSAPARSY_					0	0	0		nc|ENSG00000125505|Q96N66-2|MBOAT7;ENST00000494142.1_1_19:54677740-54682918:-|nuORF;nc|ENSG00000125505|Q96N66-3|MBOAT7;ENSG00000125505|ENST00000245615|MBOAT7	nc|ENSG00000125505|Q96N66-2|MBOAT7	nc|ENSG00000125505|Q96N66-2|MBOAT7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.23785400390625	2	440.237784	878.461016	1.6858	0.00074214	-0.78692	-0.00034643	0.89886	0.00039571	440.2372510646035	18.42	0.43113	18.341	18.138	18.57	-0.078941					21	16	2	0	0	0	0.91472	1	313	313		44.117	1.6423	1	91606			23702	14893	15979	15989	27185	27185					0.016923450661806783
KSAPKHYQ	8	Unmodified	_KSAPKHYQ_					0	0	0			REV__ENSG00000138430|ENST00000284719|OLA1	REV__ENSG00000138430|ENST00000284719|OLA1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2774658203125	2	479.758884	957.503215	-0.87861	-0.00042152	-2.3353	-0.0011204	-3.2139	-0.0015419	479.75757525233126	83.66	1.556	83.719	82.858	84.414	0.059258					63	35	2	0	0	0	0.4196	1	8388	8388		32.812	6.0163	1	71419	+		23703	19471	15980	15990	27186	27186					0.02276320474561544
KSAPPLPK	8	Unmodified	_KSAPPLPK_					0	0	0			REV__ENSG00000159166|ENST00000391967|LAD1	REV__ENSG00000159166|ENST00000391967|LAD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2265319824219	2	419.263271	836.511988	-1.8081	-0.00075807	4.0788	0.0017101	2.2707	0.00095204	419.2653206010589	75.435	0.15694	75.56	75.484	75.641	0.12545					5	3	2	0	0	0	0.4196	1	7018	7018		15.642	11.326	1	14183	+		23704	20642	15981	15991	27187	27187					0.0871929411102883
KSAQKAHN	8	Unmodified	_KSAQKAHN_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24090576171875	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.87259	1	7507	7507		58.782	19.529	1	716910			23705	1132	15982	15992	27188	27188					0.021228632976999506
KSAQKAHN	8	Unmodified	_KSAQKAHN_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2408447265625	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.89679	2	8412	8151;8412		39.253	5.7372	1	1238700			23706	1132	15982	15992	27189;27190	27190					0.021228632976999506
KSAQKAHN	8	Unmodified	_KSAQKAHN_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2408142089844	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.90089	3	8103	8068;8103;8245		49.442	13.823	1	1244000			23707	1132	15982	15992	27191;27192;27193	27192					0.021228632976999506
KSAQKAHN	8	Unmodified	_KSAQKAHN_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2407531738281	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.87064	2	7793	7793;7875		40.778	0.89528	1	1219900			23708	1132	15982	15992	27194;27195	27194					0.021228632976999506
KSAQKAHN	8	Unmodified	_KSAQKAHN_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2408142089844	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.87064	1	7924	7924		29.15	2.3535	1	1094000			23709	1132	15982	15992	27196	27196					0.021228632976999506
KSAQKAHN	8	Unmodified	_KSAQKAHN_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2408447265625	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.88185	4	7642	7642;7908;7920;8016		40.778	5.1599	1	968500			23710	1132	15982	15992	27197;27198;27199;27200	27197					0.021228632976999506
KSAQKAHN	8	Unmodified	_KSAQKAHN_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.24139404296875	2	442.240858	882.467164	-0.73522	-0.00032514	0.71434	0.00031591	-0.020876	-9.2322E-06	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.88601	1	9386	9386		34.173	3.6689	1	866900			23711	1132	15982	15992	27201	27201					0.021228632976999506
KSAQKAHN	8	Unmodified	_KSAQKAHN_					0	0	0		ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.24053955078125	2	442.240858	882.467164	0.21245	9.3954E-05	-0.1421	-6.2841E-05	0.070351	3.1112E-05	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.87259	3	9342	9331;9342;9426		58.782	10.498	1	1030200			23712	1132	15982	15992	27202;27203;27204	27203					0.021228632976999506
KSATVKLS	8	Unmodified	_KSATVKLS_					0	0	0		ENSG00000177570|ENST00000314727|SAMD12	ENSG00000177570|ENST00000314727|SAMD12	ENSG00000177570|ENST00000314727|SAMD12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.258544921875	2	417.258185	832.501818	0.01446	6.0334E-06	0.588	0.00024535	0.60246	0.00025138	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.80514	1	566	566		19.104	0.77911	1	817900			23713	7148	15983	15993	27205	27205					0.07886686385802477
KSATVKLS	8	Unmodified	_KSATVKLS_					0	0	0		ENSG00000177570|ENST00000314727|SAMD12	ENSG00000177570|ENST00000314727|SAMD12	ENSG00000177570|ENST00000314727|SAMD12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.25823974609375	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.86677	1	974	974		27.882	4.8398	1	1763000			23714	7148	15983	15993	27206	27206					0.07886686385802477
KSATVKLS	8	Unmodified	_KSATVKLS_					0	0	0		ENSG00000177570|ENST00000314727|SAMD12	ENSG00000177570|ENST00000314727|SAMD12	ENSG00000177570|ENST00000314727|SAMD12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2572937011719	2	417.258185	832.501818	0.52563	0.00021932	-0.071237	-2.9724E-05	0.45439	0.0001896	417.2580621570988	22.515	2.686	21.904	21.633	24.319	-0.6107					140	63	3	0	0	0	0.80514	1	1018	1018		19.104	0.77911	1	2260100			23715	7148	15983	15993	27207	27207					0.07886686385802477
KSAVAPLRLVR	11	Unmodified	_KSAVAPLRLVR_					0	0	0			REV__ENSG00000178921|ENST00000314666|PFAS	REV__ENSG00000178921|ENST00000314666|PFAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9299011230469	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.74763	1	3932	3932		15.337	3.4051	1	2636600	+		23716	22301	15984	15994	27208	27208					0.17569039722002344
KSAVRHQLVLD	11	Unmodified	_KSAVRHQLVLD_					0	0	0		nc|ENSG00000221949|Q8N7H1|LINC01465	nc|ENSG00000221949|Q8N7H1|LINC01465	nc|ENSG00000221949|Q8N7H1|LINC01465	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5818176269531	3	422.582333	1264.72517	-0.18543	-7.8358E-05	-0.58125	-0.00024563	-0.76668	-0.00032399	422.58203704906714	97.831	3.5899	97.888	96.517	100.11	0.056831					202	83	4	0	0	0	0.69931	1	10343	10343		34.501	11.123	1	436660			23717	15260	15985	15995	27209	27209					0.1033955510006308
KSCKFPRERT	10	Unmodified	_KSCKFPRERT_					0	0	0			REV__ENSG00000185219|ENST00000396077|ZNF445	REV__ENSG00000185219|ENST00000396077|ZNF445	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.333251953125	2	626.334964	1250.65538	-0.6713	-0.00042046	-2.7518	-0.0017235	-3.4231	-0.002144	626.3330596948049	43.058	0.73404	43.058	42.724	43.458	0.00016785					42	16	4	0	0	0	0.66675	1	3264	3264		46.457	3.5925	1	337190	+		23718	22746	15986	15996	27210	27210					0.040073531598181944
KSCKKFML	8	Unmodified	_KSCKKFML_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1;ENST00000475367.1_1_9:131356439-131361310:+|nuORF	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.7728576660156	2	492.772091	983.529629	-0.55043	-0.00027124	-1.1825	-0.00058269	-1.7329	-0.00085393	492.7716650672891	72.523	0.71144	72.482	72.201	72.912	-0.04039					34	25	2	0	0	0	0.90523	1	7081	7081		40.778	1.5253	1	85038			23719	8189	15987	15997	27211	27211					0.03720550050036309
KSCLKKPL	8	Unmodified	_KSCLKKPL_					0	0	0			REV__ENST00000524852.1_1_11:6340397-6340502:-|nuORF	REV__ENST00000524852.1_1_11:6340397-6340502:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.7877502441406	2	458.786056	915.557558	1.7438	0.00080003	1.1153	0.0005117	2.8591	0.0013117	458.7865715116249	93.096	4.333	93.035	92.463	96.796	-0.061432					233	102	5	0	0	0	0.85277	1	9954	9954		25.45	1.2474	1	18947000	+		23720	28175	15988	15998	27212	27212					0.09640196301768356
KSCVLNRKKHL	11	Unmodified	_KSCVLNRKKHL_					0	0	0		chr11:65455581-65456638|55|12.33|0.35|5.13|+|0|TE_info:Charlie8,Charlie8_dup1923,hAT-Charlie,DNA,acceptor,+,65456638,65456979|FAUP4,None|4	chr11:65455581-65456638|55|12.33|0.35|5.13|+|0|TE_info:Charlie8,Charlie8_dup1923,hAT-Charlie,DNA,acceptor,+,65456638,65456979|FAUP4,None|4	chr11:65455581-65456638|55|12.33|0.35|5.13|+|0|TE_info:Charlie8,Charlie8_dup1923,hAT-Charlie,DNA,acceptor,+,65456638,65456979|FAUP4,None|4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.6011657714844	3	442.599329	1324.77616	-0.15208	-6.7312E-05	4.0214	0.0017798	3.8693	0.0017125	442.6010716654733	103.97	1.4842	103.96	103.51	105	-0.0035706					84	35	4	0	0	0	0.76087	1	11179	11179		19.627	1.0959	1	603650			23721	106	15989	15999	27213	27213					0.12676180873290832
KSDETNGS	8	Unmodified	_KSDETNGS_					0	0	0			REV__nc|ENSG00000107105|Q12926-2|ELAVL2	REV__nc|ENSG00000107105|Q12926-2|ELAVL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.18402099609375	2	419.182872	836.35119	2.1215	0.00088931	-0.46274	-0.00019397	1.6588	0.00069534	419.18264095568793	100	1.9591	100.35	99.506	101.46	0.34591					92	48	2	0	0	0	0.87064	1	12132	12132		29.15	0.89528	1	9424600	+		23722	15933	15990	16000	27214	27214					-0.07353125063650623
KSDKKGQKL	9	Unmodified	_KSDKKGQKL_					0	0	0			REV__ENSG00000155833|ENST00000374798|CYLC2	REV__ENSG00000155833|ENST00000374798|CYLC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.312744140625	2	516.314023	1030.61349	0.876	0.00045229	-1.3141	-0.00067851	-0.43813	-0.00022621	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.78983	1	10938	10938		27.882	2.3082	1	67025000	+		23723	20447	15991	16001	27215	27215					0.0994112074295117
KSDKKKALDG	10	Unmodified	_KSDKKKALDG_					0	0	0			REV__ENSG00000109063|ENST00000583535|MYH3	REV__ENSG00000109063|ENST00000583535|MYH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.31640625	2	545.316763	1088.61897	-1.4674	-0.00080021	1.1752	0.00064085	-0.29222	-0.00015935	545.3172916402864	93.375	2.3581	93.567	93.147	95.505	0.19239					96	56	3	0	0	0	0.73395	1	9456	9456		42.864	2.8061	1	1075700	+		23724	17744	15992	16002	27216	27216					0.07820799534761136
KSDKSFKRKK	10	Unmodified	_KSDKSFKRKK_					0	0	0		ENSG00000238210|ENST00000427686|ETDA;ENSG00000224107|ENST00000423661|ETDB	ENSG00000238210|ENST00000427686|ETDA	ENSG00000238210|ENST00000427686|ETDA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3781127929688	2	626.380229	1250.7459	2.9114	0.0018237	-2.1698	-0.0013591	0.74162	0.00046454	626.3789104514062	116.12	0.91767	116.1	115.83	116.75	-0.02433					47	26	2	0	0	0	0.85694	1	12909	12909		21.96	1.013	1	135240			23725	8702	15993	16003	27217	27217					0.1305614547973164
KSDLWYLRSK	10	Unmodified	_KSDLWYLRSK_					0	0	0			REV__nc|ENSG00000147852|P98155-2|VLDLR	REV__nc|ENSG00000147852|P98155-2|VLDLR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3594360351562	2	648.358962	1294.70337	-0.033663	-2.1826E-05	-4.0928	-0.0026536	-4.1264	-0.0026754	648.3561672466351	99.16	0.58132	99.16	98.849	99.431	0					24	13	3	0	0	0	0.60985	1	10011	10011		49.536	16.724	1	275360	+		23726	20087	15994	16004	27218	27218					0.06780750351481402
KSDLWYLRSK	10	Unmodified	_KSDLWYLRSK_					0	0	0			REV__nc|ENSG00000147852|P98155-2|VLDLR	REV__nc|ENSG00000147852|P98155-2|VLDLR	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	648.358962	1294.70337	-0.033663	-2.1826E-05	-4.0928	-0.0026536	-4.1264	-0.0026754	648.3561672466351	99.16	0.58132	99.16	98.849	99.431	0	-0.024774	0.00082425	NaN	49.536	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	275360	+		23727	20087	15994	16004							0.06780750351481402
KSDLWYLRSK	10	Unmodified	_KSDLWYLRSK_					0	0	0			REV__nc|ENSG00000147852|P98155-2|VLDLR	REV__nc|ENSG00000147852|P98155-2|VLDLR	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	648.358962	1294.70337	1.5998	0.0010373	-5.8752	-0.0038092	-4.2754	-0.002772	648.3550620507015	98.859	0.45886	99.082	98.789	99.247	0.22262	-0.10323	-0.0014871	NaN	49.536	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128670	+		23728	20087	15994	16004							0.06780750351481402
KSDLWYLRSK	10	Unmodified	_KSDLWYLRSK_					0	0	0			REV__nc|ENSG00000147852|P98155-2|VLDLR	REV__nc|ENSG00000147852|P98155-2|VLDLR	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	648.358962	1294.70337	-1.1411	-0.00073981	-2.81	-0.0018219	-3.9511	-0.0025617	648.3567812103439	98.973	0.54533	99.159	98.853	99.399	0.18582	-0.02607	0.0024876	NaN	49.536	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173460	+		23729	20087	15994	16004							0.06780750351481402
KSDLWYLRSK	10	Unmodified	_KSDLWYLRSK_					0	0	0			REV__nc|ENSG00000147852|P98155-2|VLDLR	REV__nc|ENSG00000147852|P98155-2|VLDLR	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	648.358962	1294.70337	1.4419	0.00093486	-5.756	-0.003732	-4.3141	-0.0027971	648.3549665557301	98.847	0.55177	99.209	98.855	99.407	0.36137	0.023824	-0.0013325	NaN	49.536	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	467520	+		23730	20087	15994	16004							0.06780750351481402
KSDLWYLRSK	10	Unmodified	_KSDLWYLRSK_					0	0	0			REV__nc|ENSG00000147852|P98155-2|VLDLR	REV__nc|ENSG00000147852|P98155-2|VLDLR	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	648.358962	1294.70337	3.2996	0.0021393	-7.6733	-0.0049751	-4.3737	-0.0028357	648.353709787113	98.952	0.62717	99.315	98.933	99.561	0.36292	0.13025	-0.0038188	NaN	49.536	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	380120	+		23731	20087	15994	16004							0.06780750351481402
KSDPNHPIY	9	Unmodified	_KSDPNHPIY_					0	0	0			REV__ENSG00000110318|ENST00000263468|CEP126	REV__ENSG00000110318|ENST00000263468|CEP126	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	535.7666625976562	2	535.766906	1069.51926	-0.057165	-3.0627E-05	0.0033722	1.8067E-06	-0.053793	-2.882E-05	535.7667893062957	35.999	0.86456	35.943	35.514	36.379	-0.055904					41	18	3	0	0	0	0.41566	1	2371	2371		56.721	3.3696	1	234410	+		23732	17806	15995	16005	27219	27219					-0.012720180792030078
KSDVHLNFY	9	Unmodified	_KSDVHLNFY_					0	0	0		nc|ENSG00000071794|Q14527-2|HLTF;ENSG00000071794|ENST00000310053|HLTF	nc|ENSG00000071794|Q14527-2|HLTF	nc|ENSG00000071794|Q14527-2|HLTF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.778564453125	2	561.782556	1121.55056	-0.95446	-0.0005362	0.51847	0.00029127	-0.436	-0.00024494	561.7827900604663	47.024	0.53688	47.01	46.719	47.255	-0.013821					22	13	2	0	0	0	0.55097	1	3798	3798		49.442	1.482	1	164890			23733	1260	15996	16006	27220	27220					-0.005354450451022785
KSDVHLNFY	9	Unmodified	_KSDVHLNFY_					0	0	0		nc|ENSG00000071794|Q14527-2|HLTF;ENSG00000071794|ENST00000310053|HLTF	nc|ENSG00000071794|Q14527-2|HLTF	nc|ENSG00000071794|Q14527-2|HLTF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.7833251953125	2	561.782556	1121.55056	0.31807	0.00017869	-0.39941	-0.00022438	-0.081334	-4.5692E-05	561.7822462294486	46.807	0.63408	46.826	46.533	47.167	0.018967					36	16	3	0	0	0	0.28163	1	3474	3474		66.429	4.3219	1	318170			23734	1260	15996	16006	27221	27221					-0.005354450451022785
KSDVHLNFY	9	Unmodified	_KSDVHLNFY_					0	0	0		nc|ENSG00000071794|Q14527-2|HLTF;ENSG00000071794|ENST00000310053|HLTF	nc|ENSG00000071794|Q14527-2|HLTF	nc|ENSG00000071794|Q14527-2|HLTF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	561.7828979492188	2	561.782556	1121.55056	0.050182	2.8191E-05	-0.11829	-6.6453E-05	-0.068107	-3.8262E-05	561.7822404459004	46.819	0.55844	46.74	46.477	47.036	-0.079006					26	14	3	0	0	0	0.44421	2	3463	3453;3463		54.776	3.4409	1	277480			23735	1260	15996	16006	27222;27223	27223					-0.005354450451022785
KSDVHLNFY	9	Unmodified	_KSDVHLNFY_					0	0	0		nc|ENSG00000071794|Q14527-2|HLTF;ENSG00000071794|ENST00000310053|HLTF	nc|ENSG00000071794|Q14527-2|HLTF	nc|ENSG00000071794|Q14527-2|HLTF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	561.782556	1121.55056	-0.50274	-0.00028243	-0.13975	-7.8507E-05	-0.64249	-0.00036094	561.7825259219627	46.857	0.592	46.829	46.549	47.141	-0.028782	-0.0357	0.00010349	NaN	66.429	30	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	193220			23736	1260	15996	16006							-0.005354450451022785
KSDVNKEYY	9	Unmodified	_KSDVNKEYY_					0	0	0		nc|ENSG00000086589|Q9NW64-2|RBM22;ENSG00000086589|ENST00000199814|RBM22;ENST00000521594.1_1_5:150076301-150080167:-|nuORF;ENST00000521248.5_1_5:150076301-150080613:-|nuORF;ENST00000522469.5_1_5:150075051-150080604:-|nuORF	nc|ENSG00000086589|Q9NW64-2|RBM22	nc|ENSG00000086589|Q9NW64-2|RBM22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.2772827148438	2	573.277303	1144.54005	-0.12319	-7.0624E-05	0.18851	0.00010807	0.065316	3.7444E-05	573.277411621475	25.214	0.61848	25.173	24.893	25.511	-0.04117					30	16	3	0	0	0	0.23176	2	1041	1041;1058		70.816	23.159	1	68124			23737	1557	15997	16007	27224;27225	27224					-0.026434724901946538
KSDVPVRLKEP	11	Unmodified	_KSDVPVRLKEP_					0	0	0			REV__ENSG00000116996|ENST00000366570|ZP4	REV__ENSG00000116996|ENST00000366570|ZP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3757934570312	2	634.372069	1266.72959	6.6614	0.0042258	1.1149	0.00070728	7.7763	0.0049331	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.65746	1	13447	13447		37.812	1.3648	1	7041100	+		23738	18240	15998	16008	27226	27226					0.10689019522965282
KSEIIKIIDR	10	Unmodified	_KSEIIKIIDR_					0	0	0			REV__nc|ENSG00000123191|P35670-2|ATP7B	REV__nc|ENSG00000123191|P35670-2|ATP7B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.3378295898438	2	607.876988	1213.73942	-0.45243	-0.00027502	0.65399	0.00039755	0.20156	0.00012253	607.8770453907617	30.939	0.39913	31.019	30.722	31.121	0.079834					10	8	2	0	0	0	0.37624	1	2032	2032		38.754	0	1	38805	+		23739	29819	15999	16009	27227	27227					0.14110207528347019
KSEKYSISR	9	Unmodified	_KSEKYSISR_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.3017578125	2	549.301113	1096.58767	-0.32801	-0.00018017	0.12821	7.0424E-05	-0.1998	-0.00010975	549.3009501569451	25.188	0.49111	24.86	24.613	25.104	-0.32825					21	10	3	0	0	0	0.55097	1	1268	1268		49.442	7.0454	1	179850			23740	7798	16000	16010	27228	27228					0.04324226500648365
KSELAGVKR	9	Unmodified	_KSELAGVKR_					0	0	0			REV__nc|ENSG00000166579|Q9GZM8-3|NDEL1	REV__nc|ENSG00000166579|Q9GZM8-3|NDEL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.3002014160156	2	494.300916	986.587279	-0.7737	-0.00038244	0.64363	0.00031815	-0.13007	-6.4295E-05	494.3011465997647	101.19	1.3573	101.19	100.82	102.17	0					71	32	4	0	0	0	0.7932	1	10320	10320		24.519	1.4767	1	465620	+		23741	16662	16001	16011	27229	27229					0.09344851571484014
KSELLTKG	8	Unmodified	_KSELLTKG_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2633972167969	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.90523	2	2415	2415;2499		44.117	1.5253	1	3673500			23742	4233	16002	16012	27230;27231	27230					0.07010669040232642
KSELLTKG	8	Unmodified	_KSELLTKG_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26275634765625	2	438.263468	874.512382	-1.2142	-0.00053214	0.66524	0.00029155	-0.54896	-0.00024059	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.86677	1	3288	3288		27.882	0	1	4828000			23743	4233	16002	16012	27232	27232					0.07010669040232642
KSELLTKG	8	Unmodified	_KSELLTKG_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26190185546875	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.81897	1	3084	3084		20.947	0.4651	1	4268300			23744	4233	16002	16012	27233	27233					0.07010669040232642
KSELLTKG	8	Unmodified	_KSELLTKG_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26239013671875	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.90523	1	2614	2614		40.778	0.20554	1	22924000			23745	4233	16002	16012	27234	27234					0.07010669040232642
KSELLTKG	8	Unmodified	_KSELLTKG_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2630615234375	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.8347	1	2715	2715		23.042	1.3402	1	22029000			23746	4233	16002	16012	27235	27235					0.07010669040232642
KSELLTKG	8	Unmodified	_KSELLTKG_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2633361816406	2	438.263468	874.512382	0.037237	1.632E-05	-0.30418	-0.00013331	-0.26694	-0.00011699	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.88185	2	2011	2011;2036		32.812	6.1195	1	10667000			23747	4233	16002	16012	27236;27237	27236					0.07010669040232642
KSELLTKG	8	Unmodified	_KSELLTKG_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2629089355469	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.8537	1	2547	2547		25.574	0.12388	1	21381000			23748	4233	16002	16012	27238	27238					0.07010669040232642
KSELLTKG	8	Unmodified	_KSELLTKG_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2638244628906	2	438.263468	874.512382	0.27759	0.00012166	-1.0434	-0.00045727	-0.76577	-0.00033561	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.88185	1	2797	2797		32.812	0	1	85249000			23749	4233	16002	16012	27239	27239					0.07010669040232642
KSELLTKG	8	Unmodified	_KSELLTKG_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2629089355469	2	438.263468	874.512382	-1.2747	-0.00055866	-0.66852	-0.00029299	-1.9432	-0.00085165	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.89043	2	3457	3457;3481		35.618	2.1027	1	219150000			23750	4233	16002	16012	27240;27241	27240					0.07010669040232642
KSEPSGSPPA	10	Unmodified	_KSEPSGSPPA_					0	0	0		ENSG00000182968|ENST00000330949|SOX1	ENSG00000182968|ENST00000330949|SOX1	ENSG00000182968|ENST00000330949|SOX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.73626708984375	2	478.737814	955.461075	-0.90022	-0.00043097	-2.4353	-0.0011659	-3.3356	-0.0015969	478.73679947267	78.748	1.2743	79.311	78.91	80.184	0.56332					63	29	3	0	0	0	0.86225	1	9038	9038		32.751	1.2207	1	1068100			23751	7488	16003	16013	27242	27242					-0.018436997244634767
KSEQAVFKAL	10	Unmodified	_KSEQAVFKAL_					0	0	0			REV__ENST00000477849.1_1_1:16056358-16058475:+|nuORF	REV__ENST00000477849.1_1_1:16056358-16058475:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8201293945312	2	560.821681	1119.62881	-0.54677	-0.00030664	-2.8297	-0.001587	-3.3765	-0.0018936	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.82886	1	9034	9034		37.812	0.65241	1	408930	+		23752	18225	16004	16014	27243	27243					0.07377987540144204
KSESARGSD	9	Unmodified	_KSESARGSD_					0	0	0		nc|ENSG00000166477|Q8WVC0-2|LEO1;ENSG00000166477|ENST00000299601|LEO1	nc|ENSG00000166477|Q8WVC0-2|LEO1	nc|ENSG00000166477|Q8WVC0-2|LEO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7227478027344	2	468.722695	935.430838	-0.94379	-0.00044238	2.4063	0.0011279	1.4626	0.00068553	468.7236903113572	85.734	0.90586	86.181	85.782	86.688	0.44736					54	21	3	0	0	0	0.72476	1	10081	10081		38.754	0.94209	1	829770			23753	6201	16005	16015	27244	27244					-0.03946058389658447
KSEVKSVV	8	Unmodified	_KSEVKSVV_					0	0	0		ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633972167969	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.87064	1	2603	2603		29.15	1.2673	1	2862500			23754	5356	16006	16016	27245	27245					0.07010669040244011
KSEVKSVV	8	Unmodified	_KSEVKSVV_					0	0	0		ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633972167969	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.88601	1	2585	2585		34.173	0	1	2361100			23755	5356	16006	16016	27246	27246					0.07010669040244011
KSEVKSVV	8	Unmodified	_KSEVKSVV_					0	0	0		ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2627258300781	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.82658	1	2749	2749		21.96	1.9631	1	22029000			23756	5356	16006	16016	27247	27247					0.07010669040244011
KSEVKSVV	8	Unmodified	_KSEVKSVV_					0	0	0		ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2620849609375	2	438.263468	874.512382	-2.4769	-0.0010856	0.22797	9.991E-05	-2.249	-0.00098564	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.88601	1	3661	3661		34.173	1.3601	1	246320000			23757	5356	16006	16016	27248	27248					0.07010669040244011
KSEVKSVV	8	Unmodified	_KSEVKSVV_					0	0	0		ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2638244628906	2	438.263468	874.512382	1.5783	0.00069171	-2.4144	-0.0010581	-0.83609	-0.00036643	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.87064	1	2809	2809		29.15	0	1	92475000			23758	5356	16006	16016	27249	27249					0.07010669040244011
KSEVSLAKQSA	11	Unmodified	_KSEVSLAKQSA_					0	0	0			REV__nc|ENSG00000143493|Q9NVH2-4|INTS7	REV__nc|ENSG00000143493|Q9NVH2-4|INTS7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3191528320312	2	574.319502	1146.62445	-1.3729	-0.0007885	1.3449	0.0007724	-0.028038	-1.6103E-05	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.65746	1	9560	9560		37.812	1.3648	1	1586900	+		23759	19816	16007	16017	27250	27250					0.057004783265938386
KSFFARKV	8	Unmodified	_KSFFARKV_					0	0	0			REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.796142578125	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.85277	1	4136	4136		25.45	2.4077	1	1240000	+		23760	17786	16008	16018	27251	27251					0.08446074267988024
KSFFARKV	8	Unmodified	_KSFFARKV_					0	0	0			REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79583740234375	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.87064	1	4104	4104		29.15	0.89528	1	1111900	+		23761	17786	16008	16018	27252	27252					0.08446074267988024
KSFFARKV	8	Unmodified	_KSFFARKV_					0	0	0			REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7954406738281	2	491.795269	981.575986	-1.7512	-0.00086123	2.5855	0.0012715	0.83426	0.00041029	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.8621	1	3778	3778		26.693	1.2427	1	2627300	+		23762	17786	16008	16018	27253	27253					0.08446074267988024
KSFFARKV	8	Unmodified	_KSFFARKV_					0	0	0			REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79595947265625	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.82658	1	3528	3528		21.96	0	1	2747400	+		23763	17786	16008	16018	27254	27254					0.08446074267988024
KSFFARKV	8	Unmodified	_KSFFARKV_					0	0	0			REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7962341308594	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.8347	1	3528	3528		23.042	5.6775	1	3201400	+		23764	17786	16008	16018	27255	27255					0.08446074267988024
KSFFARKV	8	Unmodified	_KSFFARKV_					0	0	0			REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7956848144531	2	491.795269	981.575986	-1.1725	-0.00057664	2.0381	0.0010023	0.86553	0.00042567	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.84341	1	4431	4431		24.203	3.2558	1	3001500	+		23765	17786	16008	16018	27256	27256					0.08446074267988024
KSFFARKV	8	Unmodified	_KSFFARKV_					0	0	0			REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79541015625	2	491.795269	981.575986	-1.2395	-0.00060959	1.4172	0.00069695	0.17764	8.7362E-05	491.7958275421146	44.647	1.7443	45.492	44.612	46.357	0.84437					115	42	4	0	0	0	0.8621	1	4117	4117		26.693	1.1189	1	6753400	+		23766	17786	16008	16018	27257	27257					0.08446074267988024
KSFFNIKK	8	Unmodified	_KSFFNIKK_					0	0	0			REV__ENST00000367696.6_1_1:173962170-173991250:-|nuORF	REV__ENST00000367696.6_1_1:173962170-173991250:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.3003845214844	2	506.302927	1010.5913	0.17096	8.6557E-05	-4.0984	-0.0020751	-3.9275	-0.0019885	506.30077801441314	96.371	1.2912	96.419	95.878	97.169	0.047798					71	29	3	0	0	0	0.87064	1	10220	10220		29.15	7.1897	1	516710	+		23767	25576	16009	16019	27258	27258					0.0864294106518173
KSFIRKDHLRK	11	Unmodified	_KSFIRKDHLRK_					0	0	0		nc|ENSG00000181220|Q6NUN9|ZNF746;nc|ENSG00000181220|Q6NUN9-2|ZNF746;ENSG00000181220|ENST00000458143|ZNF746;nc|ENSG00000181220|Q6NUN9-3|ZNF746	nc|ENSG00000181220|Q6NUN9|ZNF746	nc|ENSG00000181220|Q6NUN9|ZNF746	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62335205078125	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.75779	1	12665	12665		20.315	7.3575	1	2577100			23768	7376	16010	16020	27259	27259					0.15574901045056322
KSFKERCCL	9	Unmodified	_KSFKERCCL_					0	0	0		ENSG00000144118|ENST00000272519|RALB;nc|ENSG00000144118|P11234-3|RALB;nc|ENSG00000144118|P11234-2|RALB	ENSG00000144118|ENST00000272519|RALB	ENSG00000144118|ENST00000272519|RALB	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.2801513671875	2	557.280812	1112.54707	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.493	1	58.58	58.08	59.08	0.087002								0	0	0	0.29273	1	4978	4978		40.778	2.9666	1				23769	4689	16011	16021	27260	27260					-0.00470154414983881
KSFLDNKIEAS	11	Unmodified	_KSFLDNKIEAS_					0	0	0			REV__ENSG00000130147|ENST00000392011|SH3BP4	REV__ENSG00000130147|ENST00000392011|SH3BP4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.37939453125	2	626.33261	1250.65067	0.9259	0.00057992	3.1974	0.0020027	4.1233	0.0025826	626.334491943548	105.22	0.20128	105.33	105.15	105.35	0.10766					9	4	3	0	0	0	0.17404	1	11200	11200		43.651	16.603	1	165360	+		23770	18848	16012	16022	27261	27261					0.035367474980375846
KSFNYSSALE	10	Unmodified	_KSFNYSSALE_					0	0	0		nc|ENSG00000278970|Q8NB50-3|ZFP62;ENSG00000196670|ENST00000502412|ZFP62	nc|ENSG00000278970|Q8NB50-3|ZFP62	nc|ENSG00000278970|Q8NB50-3|ZFP62	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.2760620117188	2	573.277303	1144.54005	-0.33774	-0.00019362	0.71802	0.00041163	0.38028	0.00021801	573.2777323239757	24.906	0.57835	24.957	24.664	25.242	0.050451					25	17	2	0	0	0	0.85981	1	947	947		35.152	3.5178	1	70108			23771	8091	16013	16023	27262	27262					-0.026434724901946538
KSFPLKLYRTT	11	Unmodified	_KSFPLKLYRTT_					0	0	0			REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.93255615234375	3	451.934484	1352.78162	-0.13819	-6.2454E-05	-3.9218	-0.0017724	-4.06	-0.0018349	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.76668	1	10745	10745		18.332	0.49852	1	924270	+		23772	18774	16014	16024	27263	27263					0.11934182936715843
KSFSIKILKDM	11	Unmodified	_KSFSIKILKDM_					0	0	0		nc|ENSG810|P63126|ERVK-9_gag;nc|ENSG809|P63128|ERVK-9_pol	nc|ENSG810|P63126|ERVK-9_gag	nc|ENSG810|P63126|ERVK-9_gag	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2567443847656	3	437.256458	1308.74754	0.72446	0.00031677	1.3162	0.00057552	2.0407	0.00089229	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.75121	1	10310	10310		21.78	0.94327	1	670840			23773	15360	16015	16025	27264	27264					0.10552018453472556
KSFSKLLKLTS	11	Unmodified	_KSFSKLLKLTS_					0	0	0			REV__ENST00000514745.5_1_4:57219701-57248665:-|nuORF	REV__ENST00000514745.5_1_4:57219701-57248665:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.389892578125	2	626.387188	1250.75982	1.3747	0.00086107	-2.9986	-0.0018783	-1.624	-0.0010172	626.8868969487263	110.01	0.86485	110.13	109.81	110.68	0.12289					76	30	3	0	0	0	0.73893	3	11819	11803;11819;11825		24.519	3.5723	1	3484200	+		23774	28020	16016	16026	27265;27266;27267	27266					0.14447378188174298
KSFSKLLKLTS	11	Unmodified	_KSFSKLLKLTS_					0	0	0			REV__ENST00000514745.5_1_4:57219701-57248665:-|nuORF	REV__ENST00000514745.5_1_4:57219701-57248665:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3892822265625	2	626.387188	1250.75982	0.92654	0.00058037	-2.4067	-0.0015075	-1.4802	-0.00092716	626.3854005656832	109.98	1.1023	110.05	109.78	110.88	0.073685					78	37	4	0	0	0	0.74763	1	11821	11821		22.58	2.5829	1	2583100	+		23775	28020	16016	16026	27268	27268					0.14447378188174298
KSFSKLLKLTS	11	Unmodified	_KSFSKLLKLTS_					0	0	0			REV__ENST00000514745.5_1_4:57219701-57248665:-|nuORF	REV__ENST00000514745.5_1_4:57219701-57248665:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.389404296875	2	626.387188	1250.75982	-1.2033	-0.00075372	0.43985	0.00027552	-0.76344	-0.00047821	626.3871390536368	109.94	1.1883	109.95	109.68	110.87	0.0060501					79	40	3	0	0	0	0.73893	1	11704	11704		24.519	2.5593	1	879220	+		23776	28020	16016	16026	27269	27269					0.14447378188174298
KSFTKRFI	8	Unmodified	_KSFTKRFI_					0	0	0		ENSG00000142156|ENST00000361866|COL6A1	ENSG00000142156|ENST00000361866|COL6A1	ENSG00000142156|ENST00000361866|COL6A1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8084716796875	2	513.808377	1025.6022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.9	1	50.808	50.308	51.308	-0.091797								0	0	0	0.29596	1	4027	4027		35.618	5.1146	1				23777	4544	16017	16027	27270	27270					0.09042343439477918
KSGAGVRAK	9	Unmodified	_KSGAGVRAK_					0	0	0		nc|ENSG00000129951|Q6T4P5-4|PLPPR3;ENSG00000129951|ENST00000520876|PLPPR3;nc|ENSG00000129951|Q6T4P5-2|PLPPR3;nc|ENSG00000129951|Q6T4P5-3|PLPPR3	nc|ENSG00000129951|Q6T4P5-4|PLPPR3	nc|ENSG00000129951|Q6T4P5-4|PLPPR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26641845703125	2	437.266876	872.519199	0.46111	0.00020163	-3.2258	-0.0014106	-2.7647	-0.0012089	437.2654513325837	23.967	1.9466	23.969	23.291	25.237	0.0018959					213	95	5	0	0	0	0.78983	1	823	823		27.882	3.6795	1	2561300			23778	3611	16018	16028	27271	27271					0.0778402671146523
KSGAGVRAK	9	Unmodified	_KSGAGVRAK_					0	0	0		nc|ENSG00000129951|Q6T4P5-4|PLPPR3;ENSG00000129951|ENST00000520876|PLPPR3;nc|ENSG00000129951|Q6T4P5-2|PLPPR3;nc|ENSG00000129951|Q6T4P5-3|PLPPR3	nc|ENSG00000129951|Q6T4P5-4|PLPPR3	nc|ENSG00000129951|Q6T4P5-4|PLPPR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26519775390625	2	437.266876	872.519199	-0.77238	-0.00033773	-1.5811	-0.00069138	-2.3535	-0.0010291	437.26614393764254	27.409	1.8866	27.234	26.703	28.59	-0.17559					105	43	3	0	0	0	0.7932	1	1512	1512		19.997	3.5236	1	457600			23779	3611	16018	16028	27272	27272					0.0778402671146523
KSGAKFKL	8	Unmodified	_KSGAKFKL_					0	0	0			REV__ENSG00000130706|ENST00000253003|ADRM1	REV__ENSG00000130706|ENST00000253003|ADRM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.77618408203125	2	439.776545	877.538538	-0.38664	-0.00017004	1.0073	0.00044297	0.62061	0.00027293	439.7768008028896	19.717	0.35246	19.645	19.508	19.86	-0.072262					14	9	2	0	0	0	0.8347	1	462	462		23.042	2.5607	1	19866	+		23780	18895	16019	16029	27273	27273					0.09486983002375382
KSGDDEVDS	9	Unmodified	_KSGDDEVDS_					0	0	0			REV__nc|ENSG00000163125|Q5VT52-5|RPRD2	REV__nc|ENSG00000163125|Q5VT52-5|RPRD2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.19903564453125	2	476.198719	950.382884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.19	1	32.172	31.672	32.672	-0.017464								0	0	0	0.32758	1	1498	1498		20.947	0	1		+		23781	20885	16020	16030	27274	27274					-0.09429177100366815
KSGELLTK	8	Unmodified	_KSGELLTK_					0	0	0		ENSG00000073734|ENST00000650372|ABCB11	ENSG00000073734|ENST00000650372|ABCB11	ENSG00000073734|ENST00000650372|ABCB11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2619934082031	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.88185	1	2903	2903		32.812	1.2826	1	2862500			23782	1297	16021	16031	27275	27275					0.07010669040221273
KSGGLRSGPV	10	Unmodified	_KSGGLRSGPV_					0	0	0			REV__ENST00000478927.5_1_3:119298448-119301006:+|nuORF	REV__ENST00000478927.5_1_3:119298448-119301006:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2783203125	2	479.277441	956.540328	-0.72512	-0.00034753	0.71589	0.00034311	-0.0092246	-4.4211E-06	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.86587	1	9367	9367		29.17	0.020503	1	1822400	+		23783	27241	16022	16032	27276	27276					0.060319920203255606
KSGKLKRIHAN	11	Unmodified	_KSGKLKRIHAN_					0	0	0			REV__L1PA8_dup7672|chr19:21549449-21550650:-|1.2897929000252433|0.363832208290546|1.83|58.0|14|2|sense	REV__L1PA8_dup7672|chr19:21549449-21550650:-|1.2897929000252433|0.363832208290546|1.83|58.0|14|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3892822265625	2	626.385845	1250.75714	-1.2033	-0.00075372	2.5834	0.0016182	1.3801	0.00086446	626.3871390536368	109.94	1.1883	109.95	109.68	110.87	0.0060501					79	40	3	0	0	0	0.72739	1	11774	11774		27.047	7.9438	1	879220	+		23784	29610	16023	16033	27277	27277					0.14178967573911905
KSGLHLTE	8	Unmodified	_KSGLHLTE_					0	0	0			REV__ENSG00000177558|ENST00000324675|FAM187B	REV__ENSG00000177558|ENST00000324675|FAM187B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.7448425292969	2	442.745442	883.476331	1.3194	0.00058415	-2.5186	-0.0011151	-1.1992	-0.00053095	442.74418253682444	89.898	0.78091	89.828	89.395	90.175	-0.069977					47	17	4	0	0	0	0.87064	1	9415	9415		29.15	8.2026	1	760840	+		23785	22217	16024	16034	27278	27278					0.029932118633723803
KSGPVIAK	8	Unmodified	_KSGPVIAK_					0	0	0		ENSG00000109920|ENST00000263773|FNBP4;nc|ENSG00000109920|Q8N3X1-2|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.25531005859375	2	400.255446	798.496338	1.9238	0.00077003	-1.2289	-0.00049189	0.69489	0.00027813	400.2548732861182	18.482	0.42122	18.005	17.796	18.218	-0.47694					16	8	3	0	0	0	0.48059	1	392	392		76.774	7.9873	1	191940			23786	2493	16025	16035	27279	27279					0.08903007593983148
KSGPVIAK	8	Unmodified	_KSGPVIAK_					0	0	0		ENSG00000109920|ENST00000263773|FNBP4;nc|ENSG00000109920|Q8N3X1-2|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2554626464844	2	400.255446	798.496338	0.011592	4.6399E-06	0.58388	0.0002337	0.59547	0.00023834	400.2555487466678	18.628	0.42853	18.007	17.813	18.241	-0.62141					20	9	3	0	0	0	0.72312	1	414	414		66.429	11.665	1	235650			23787	2493	16025	16035	27280	27280					0.08903007593983148
KSGPVIAKR	9	Unmodified	_KSGPVIAKR_					0	0	0		ENSG00000109920|ENST00000263773|FNBP4;nc|ENSG00000109920|Q8N3X1-2|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.30487060546875	2	478.306001	954.597449	1.1239	0.00053757	-1.4254	-0.00068176	-0.30146	-0.00014419	478.30517389078557	17.535	0.47468	17.052	16.898	17.373	-0.48256					20	10	3	0	0	0	0.16822	1	269	269		80.455	37.98	1	317000			23788	2493	16026	16036	27281	27281					0.11833459296690307
KSGPVIAKR	9	Unmodified	_KSGPVIAKR_					0	0	0		ENSG00000109920|ENST00000263773|FNBP4;nc|ENSG00000109920|Q8N3X1-2|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	ENSG00000109920|ENST00000263773|FNBP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.3047790527344	2	478.306001	954.597449	-0.61994	-0.00029652	0.11621	5.5584E-05	-0.50373	-0.00024094	478.3058961311463	17.626	0.43239	17.015	16.844	17.276	-0.6107					25	11	3	0	0	0	0.24527	2	287	287;298		69.628	25.25	1	400360			23789	2493	16026	16036	27282;27283	27282					0.11833459296690307
KSGPVVLYF	9	Unmodified	_KSGPVVLYF_					0	0	0		ENSG00000151474|ENST00000357447|FRMD4A;chr10:13858912-14008060|38|13.37|0.65|4.37|-|ENST00000640906|FRMD4A,FRMD4A;ENST00000342409.3_1_10:13735712-14050160:-|nuORF	ENSG00000151474|ENST00000357447|FRMD4A	ENSG00000151474|ENST00000357447|FRMD4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.2924499511719	2	505.289485	1008.56442	2.3779	0.0012015	1.554	0.00078521	3.9319	0.0019867	505.29016362201537	97.35	2.1515	97.295	96.802	98.953	-0.055542					137	49	4	0	0	0	0.78536	1	10436	10436		29.15	1.2673	1	1240400			23790	5120	16027	16037	27284	27284					0.060478324539985806
KSGQLIKT	8	Unmodified	_KSGQLIKT_					0	0	0		nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1;ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047-2|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7706604003906	2	437.77146	873.528367	-1.5883	-0.00069529	1.3765	0.00060259	-0.21176	-9.2702E-05	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.82658	1	2255	2255		21.96	0.25755	1	1227500			23791	4624	16028	16038	27285	27285					0.08654375277149029
KSGQLIKT	8	Unmodified	_KSGQLIKT_					0	0	0		nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1;ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047-2|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.77130126953125	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.81184	1	2197	2197		19.997	4.355	1	1151500			23792	4624	16028	16038	27286	27286					0.08654375277149029
KSGQLIKT	8	Unmodified	_KSGQLIKT_					0	0	0		nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1;ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047-2|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.771240234375	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.81184	1	2288	2288		19.997	1.6724	1	1041500			23793	4624	16028	16038	27287	27287					0.08654375277149029
KSGQLIKT	8	Unmodified	_KSGQLIKT_					0	0	0		nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1;ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047-2|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77166748046875	2	437.77146	873.528367	-0.60383	-0.00026434	1.3933	0.00060996	0.7895	0.00034562	437.771905353534	38.344	0.47827	38.686	38.418	38.896	0.34187					32	11	3	0	0	0	0.82658	1	3172	3172		21.96	0	1	1117700			23794	4624	16028	16038	27288	27288					0.08654375277149029
KSGTKLLH	8	Unmodified	_KSGTKLLH_					0	0	0		ENST00000566316.5_1_16:10481362-10481509:+|nuORF	ENST00000566316.5_1_16:10481362-10481509:+|nuORF	ENST00000566316.5_1_16:10481362-10481509:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.27166748046875	2	442.271627	882.528701	0.072632	3.2123E-05	-0.92756	-0.00041023	-0.85493	-0.00037811	442.2710823318827	84.471	2.4316	84.918	83.971	86.403	0.44736					123	59	3	0	0	0	0.9295	1	9859	9859		55.504	2.1528	1	2524500			23795	13932	16029	16039	27289	27289					0.08273794997001005
KSGVKKDL	8	Unmodified	_KSGVKKDL_					0	0	0		ENSG00000155380|ENST00000369626|SLC16A1;nc|ENSG00000155380|P53985-2|SLC16A1	ENSG00000155380|ENST00000369626|SLC16A1	ENSG00000155380|ENST00000369626|SLC16A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7701416015625	2	437.77146	873.528367	0.18916	8.281E-05	-0.44353	-0.00019417	-0.25437	-0.00011136	437.77124644611854	39.786	1.476	39.875	39.186	40.662	0.088375					62	41	2	0	0	0	0.86677	1	2382	2382		27.882	2.4321	1	3151300			23796	5322	16030	16040	27290	27290					0.08654375277126292
KSHEAKLVLLN	11	Unmodified	_KSHEAKLVLLN_					0	0	0		nc|ENSG00000140199|Q9UHW9-6|SLC12A6;nc|ENSG00000140199|Q9UHW9-5|SLC12A6;nc|ENSG00000140199|Q9UHW9-2|SLC12A6;nc|ENSG00000140199|Q9UHW9-3|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;ENSG00000140199|ENST00000354181|SLC12A6	nc|ENSG00000140199|Q9UHW9-6|SLC12A6	nc|ENSG00000140199|Q9UHW9-6|SLC12A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3794555664062	2	626.374612	1250.73467	4.8484	0.0030369	3.2376	0.002028	8.086	0.0050649	626.376538751344	105.56	2.7242	105.75	104.85	107.57	0.18647					224	90	4	0	0	0	0.66009	1	12919	12919		37.508	5.9784	1	2877800			23797	4416	16031	16041	27291	27291					0.11933323385619587
KSHELLKIAKD	11	Unmodified	_KSHELLKIAKD_					0	0	0			REV__nc|ENSG00000112208|O95816-2|BAG2	REV__nc|ENSG00000112208|O95816-2|BAG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.384521484375	2	641.379894	1280.74524	2.7089	0.0017374	4.3987	0.0028213	7.1076	0.0045587	641.3824552667398	102.77	1.4212	102.72	102.34	103.76	-0.046997					84	34	4	0	0	0	0.72739	1	11225	11225		27.047	1.9213	1	1908400	+		23798	17925	16032	16042	27292	27292					0.11609306040031697
KSHELLKIAKD	11	Unmodified	_KSHELLKIAKD_					0	0	0			REV__nc|ENSG00000112208|O95816-2|BAG2	REV__nc|ENSG00000112208|O95816-2|BAG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.3843994140625	2	641.379894	1280.74524	1.7205	0.0011035	4.4642	0.0028633	6.1847	0.0039667	641.3823801195498	102.44	0.7573	102.7	102.23	102.99	0.26322					53	19	4	0	0	0	0.62614	1	12451	12451		41.427	6.2746	1	2286900	+		23799	17925	16032	16042	27293	27293					0.11609306040031697
KSHELLKIAKD	11	Unmodified	_KSHELLKIAKD_					0	0	0			REV__nc|ENSG00000112208|O95816-2|BAG2	REV__nc|ENSG00000112208|O95816-2|BAG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.3841552734375	2	641.379894	1280.74524	4.2845	0.002748	2.1231	0.0013617	6.4076	0.0041097	641.38089216233	102.49	0.67636	102.79	102.3	102.98	0.29865					46	15	4	0	0	0	0.67041	1	12485	12485		36.318	2.396	1	2385400	+		23800	17925	16032	16042	27294	27294					0.11609306040031697
KSHEMRQLLR	10	Unmodified	_KSHEMRQLLR_					0	0	0			REV__ENSG00000100991|ENST00000252015|TRPC4AP	REV__ENSG00000100991|ENST00000252015|TRPC4AP	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	649.3541259765625	2	649.361513	1296.70847	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115	1	115.01	114.51	115.51	0.0094528								0	0	0	0.45132	1	13867	13867		36.447	0.82846	1		+		23801	17234	16033	16043	27295	27295					0.07198730942468501
KSHIKACG	8	Unmodified	_KSHIKACG_					0	0	0			REV__ENST00000276461.9_2_8:37612723-37612837:+|nuORF	REV__ENST00000276461.9_2_8:37612723-37612837:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.228271484375	2	422.228905	842.443257	-1.5313	-0.00064655	-0.46852	-0.00019782	-1.9998	-0.00084437	422.228628241818	64.101	0.62197	64.101	63.67	64.292	0					53	29	2	0	0	0	0.84341	1	5615	5615		24.203	1.1603	1	218720	+		23802	24581	16034	16044	27296	27296					0.015733065396716484
KSHIRIKHT	9	Unmodified	_KSHIRIKHT_					0	0	0		chr20:52098587-52105132|60|59.87|0.74|6.33|-|ENST00000371523|ZFP64,ZFP64;nc|ENSG00000020256|Q9NTW7-2|ZFP64;nc|ENSG00000020256|Q9NTW7|ZFP64	chr20:52098587-52105132|60|59.87|0.74|6.33|-|ENST00000371523|ZFP64,ZFP64	chr20:52098587-52105132|60|59.87|0.74|6.33|-|ENST00000371523|ZFP64,ZFP64	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.33984375	2	560.340907	1118.66726	3.1454	0.0017625	-4.1604	-0.0023312	-1.015	-0.00056875	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.77696	1	13149	13149		31.53	7.0106	1	151040			23803	365	16035	16045	27297	27297					0.11267337965318802
KSHLNVVFVIL	11	Unmodified	_KSHLNVVFVIL_					0	0	0			REV__nc|ENSG00000100162|Q9NSP4-4|CENPM	REV__nc|ENSG00000100162|Q9NSP4-4|CENPM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8931884765625	2	634.889898	1267.76524	1.4999	0.00095225	2.3399	0.0014856	3.8398	0.0024378	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.65746	1	11382	11382		37.812	1.3648	1	68597000	+		23804	17146	16036	16046	27298	27298					0.14207101770671215
KSHLNVVFVIL	11	Unmodified	_KSHLNVVFVIL_					0	0	0			REV__nc|ENSG00000100162|Q9NSP4-4|CENPM	REV__nc|ENSG00000100162|Q9NSP4-4|CENPM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8934326171875	2	634.889898	1267.76524	0.93451	0.00059331	2.8473	0.0018077	3.7818	0.002401	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.65746	1	11383	11383		37.812	2.1932	1	69492000	+		23805	17146	16036	16046	27299	27299					0.14207101770671215
KSHNLSKTSG	10	Unmodified	_KSHNLSKTSG_					0	0	0			REV__nc|ENSG00000111077|Q63HR2-2|TNS2	REV__nc|ENSG00000111077|Q63HR2-2|TNS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7815551757812	2	529.783087	1057.55162	0.065511	3.4706E-05	-3.9587	-0.0020972	-3.8932	-0.0020625	529.7807903370734	52.522	1.485	53.136	52.584	54.069	0.61446					111	35	5	0	0	0	0.86698	1	5269	5269		28.081	2.5074	1	6729200	+		23806	17848	16037	16047	27300	27300					0.025147693238068314
KSHPPTKKRV	10	Unmodified	_KSHPPTKKRV_					0	0	0			REV__ENST00000592621.5_2_19:5927995-5941693:-|nuORF	REV__ENST00000592621.5_2_19:5927995-5941693:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3428344726562	2	589.361839	1176.70913	0.83107	0.0004898	4.2333	0.0024949	5.0644	0.0029847	589.3642067413986	94.735	0.17458	95.168	95.069	95.244	0.4324					6	3	2	0	0	0	0.37624	1	11309	11309		12.812	2.5465	1	64196	+		23807	29216	16038	16048	27301	27301					0.12783893653818268
KSHVALISVGS	11	Unmodified	_KSHVALISVGS_					0	0	0			REV__ENSG00000120137|ENST00000239231|PANK3	REV__ENSG00000120137|ENST00000239231|PANK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3204956054688	2	549.319306	1096.62406	0.23279	0.00012788	-3.323	-0.0018254	-3.0902	-0.0016975	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.69995	1	10642	10642		31.53	4.4825	1	3004300	+		23808	18399	16039	16049	27302	27302					0.07961103397406077
KSIFARLSAFV	11	Unmodified	_KSIFARLSAFV_					0	0	0			REV__ENSG00000147251|ENST00000276202|DOCK11	REV__ENSG00000147251|ENST00000276202|DOCK11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8693237304688	2	619.866423	1237.71829	2.311	0.0014325	2.5285	0.0015673	4.8395	0.0029999	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.65746	1	10366	10366		37.812	0.65241	1	4854700	+		23809	20062	16040	16050	27303	27303					0.10894242219501393
KSIGRLTK	8	Unmodified	_KSIGRLTK_					0	0	0			REV__L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|19|2|sense	REV__L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|19|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.9047546386719	2	451.792727	901.5709	-0.11013	-4.9754E-05	-0.64362	-0.00029078	-0.75374	-0.00034054	451.79234640205124	19.762	0.56478	19.293	19.019	19.584	-0.46967					18	11	2	0	0	0	0.4196	1	568	568		16.473	4.2663	1	34305	+		23810	29460	16041	16051	27304	27304					0.11617770405359806
KSIKKADKSA	10	Unmodified	_KSIKKADKSA_					0	0	0			REV__nc|ENSG00000178125|Q7Z4L9|PPP1R42	REV__nc|ENSG00000178125|Q7Z4L9|PPP1R42	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3272094726562	2	538.327131	1074.63971	1.246	0.00067076	-1.73	-0.00093129	-0.48397	-0.00026053	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.86047	1	11217	11217		23.523	0	1	76567000	+		23811	22256	16042	16052	27305	27305					0.10537389914406958
KSIKKRSN	8	Unmodified	_KSIKKRSN_					0	0	0			REV__ENST00000507446.1_1_4:761063-761393:-|nuORF	REV__ENST00000507446.1_1_4:761063-761393:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.8010559082031	2	480.801083	959.587613	-0.095214	-4.5779E-05	-0.50772	-0.00024411	-0.60293	-0.00028989	480.80074135922035	95.38	4.3631	95.446	94.67	99.033	0.065918					323	101	5	0	0	0	0.87922	1	10207	10207		31.955	2.8053	1	17278000	+		23812	27908	16043	16053	27306	27306					0.10620271291327299
KSILIPPVNTV	11	Unmodified	_KSILIPPVNTV_					0	0	0		ENST00000472403.5_2_17:42766475-42767202:+|nuORF	ENST00000472403.5_2_17:42766475-42767202:+|nuORF	ENST00000472403.5_2_17:42766475-42767202:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8666381835938	2	590.868631	1179.72271	-0.64254	-0.00037966	-3.2896	-0.0019437	-3.9321	-0.0023234	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.41445	1	11388	11388		58.246	21.799	1	52912000			23813	12261	16044	16054	27307	27307					0.140037066423929
KSIPMRNLRA	10	Unmodified	_KSIPMRNLRA_					0	0	0		nc|ENSG00000206075|P36952-2|SERPINB5	nc|ENSG00000206075|P36952-2|SERPINB5	nc|ENSG00000206075|P36952-2|SERPINB5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3443603515625	2	593.347874	1184.6812	-1.311	-0.00077786	-4.4016	-0.0026117	-5.7125	-0.0033895	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.86718	1	10910	10910		27.882	3.3631	1	3957400			23814	15224	16045	16055	27308	27308					0.09624247402098263
KSIRKKKSA	9	Unmodified	_KSIRKKKSA_					0	0	0			REV__ENST00000488636.5_1_2:201399822-201407388:+|nuORF	REV__ENST00000488636.5_1_2:201399822-201407388:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3033447265625	2	523.345658	1044.67676	-0.80356	-0.00042054	-2.079	-0.001088	-2.8825	-0.0015086	523.3443061239731	88.853	0.12376	88.853	88.751	88.874	0					4	2	2	0	0	0	0.20789	1	8562	8562		20.947	11.476	1	27065	+		23815	20930	16046	16056	27309	27309					0.15621106250841876
KSIRSEIRKPV	11	Unmodified	_KSIRSEIRKPV_					0	0	0			REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|28|1|sense	REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|28|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2728576660156	3	438.273499	1311.79867	-1.813	-0.00079457	0.59005	0.0002586	-1.2229	-0.00053597	438.2736679941031	107.15	1.2018	107.19	106.63	107.83	0.036118					118	28	5	0	0	0	0.73277	1	11483	11483		25.892	1.6599	1	2816400	+		23816	29510	16047	16057	27310	27310					0.15524103542543344
KSIRSELPT	9	Unmodified	_KSIRSELPT_					0	0	0			REV__nc|ENSG00000110675|Q8N336-2|ELMOD1	REV__nc|ENSG00000110675|Q8N336-2|ELMOD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	515.7985229492188	2	515.798206	1029.58186	0.86203	0.00044463	-0.8464	-0.00043657	0.015635	8.0647E-06	515.7976040418051	22.225	0.54082	22.29	22.042	22.583	0.064745					35	20	2	0	0	0	0.76764	1	654	654		34.173	3.6689	1	49133	+		23817	15485	16048	16058	27311	27311					0.06825127988986424
KSIRSELPT	9	Unmodified	_KSIRSELPT_					0	0	0			REV__nc|ENSG00000110675|Q8N336-2|ELMOD1	REV__nc|ENSG00000110675|Q8N336-2|ELMOD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.7977905273438	2	515.798206	1029.58186	0.5074	0.00026172	-0.63996	-0.00033009	-0.13255	-6.837E-05	515.7977750786778	22.467	0.5186	22.41	22.191	22.709	-0.057203					37	22	2	0	0	0	0.75725	1	680	680		36.447	0.82846	1	69122	+		23818	15485	16048	16058	27312	27312					0.06825127988986424
KSIRVRTG	8	Unmodified	_KSIRVRTG_					0	0	0			REV__nc|ENSG00000109184|Q92564-3|DCUN1D4	REV__nc|ENSG00000109184|Q92564-3|DCUN1D4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.7878112792969	2	458.787976	915.561398	1.7438	0.00080003	-3.0694	-0.0014082	-1.3256	-0.00060818	458.7865715116249	93.096	4.333	93.035	92.463	96.796	-0.061432					233	102	5	0	0	0	0.89043	1	9966	9966		35.618	0.41757	1	18947000	+		23819	29773	16049	16059	27313	27313					0.10024002119848774
KSIRVRTG	8	Unmodified	_KSIRVRTG_					0	0	0			REV__nc|ENSG00000109184|Q92564-3|DCUN1D4	REV__nc|ENSG00000109184|Q92564-3|DCUN1D4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7877502441406	2	458.787976	915.561398	-1.1207	-0.00051419	0.067786	3.1099E-05	-1.053	-0.00048309	458.7879776925229	92.908	3.5156	93.134	92.238	95.754	0.22548					221	84	5	0	0	0	0.86677	1	9486	9486		27.882	2.4321	1	15931000	+		23820	29773	16049	16059	27314	27314					0.10024002119848774
KSIRVRTG	8	Unmodified	_KSIRVRTG_					0	0	0			REV__nc|ENSG00000109184|Q92564-3|DCUN1D4	REV__nc|ENSG00000109184|Q92564-3|DCUN1D4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.7877502441406	2	458.787976	915.561398	-1.7492	-0.00080251	0.76438	0.00035069	-0.98482	-0.00045182	458.7883137610394	92.976	2.4972	93.168	92.52	95.017	0.19239					169	59	5	0	0	0	0.79929	1	9448	9448		18.324	0	1	11606000	+		23821	29773	16049	16059	27315	27315					0.10024002119848774
KSIRVRTG	8	Unmodified	_KSIRVRTG_					0	0	0			REV__nc|ENSG00000109184|Q92564-3|DCUN1D4	REV__nc|ENSG00000109184|Q92564-3|DCUN1D4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7875671386719	2	458.787976	915.561398	-0.56463	-0.00025905	0.14629	6.7115E-05	-0.41835	-0.00019193	458.7879697200244	92.862	1.6326	93.312	92.732	94.365	0.44989					129	38	4	0	0	0	0.89043	1	11197	11197		35.618	0.41757	1	6441800	+		23822	29773	16049	16059	27316	27316					0.10024002119848774
KSISVSVN	8	Unmodified	_KSISVSVN_					0	0	0		ENSG00000110002|ENST00000456829|VWA5A;ENST00000533623.1_1_11:123988218-123988639:+|nuORF;nc|ENSG00000110002|O00534-4|VWA5A;nc|ENSG00000110002|O00534-3|VWA5A;nc|ENSG00000110002|O00534-2|VWA5A	ENSG00000110002|ENST00000456829|VWA5A	ENSG00000110002|ENST00000456829|VWA5A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.2395935058594	2	417.239993	832.465432	-1.1717	-0.00048886	-1.3676	-0.00057062	-2.5392	-0.0010595	417.23924184101116	88.678	1.8374	88.678	88.117	89.954	0					78	42	3	0	0	0	0.82658	2	8541	8541;8566		34.173	3.6689	1	977120			23823	2498	16050	16060	27317;27318	27317					0.04249809489101608
KSIVKIRKSLF	11	Unmodified	_KSIVKIRKSLF_					0	0	0			REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.6272277832031	3	440.29049	1317.84964	-0.14762	-6.4996E-05	4.4487	0.0019587	4.3011	0.0018937	440.29224154688933	58.12	1.3783	58.106	57.522	58.9	-0.013641					131	47	4	0	0	0	0.76892	1	5247	5247		17.833	4.3252	1	235220	+		23824	28012	16051	16061	27319	27319					0.20343052587395505
KSIVLQAAVPK	11	Unmodified	_KSIVLQAAVPK_					0	0	0		nc|ENSG00000125447|Q9NZ52-3|GGA3;nc|ENSG00000125447|Q9NZ52-4|GGA3;nc|ENSG00000125447|Q9NZ52-2|GGA3;ENSG00000125447|ENST00000537686|GGA3	nc|ENSG00000125447|Q9NZ52-3|GGA3	nc|ENSG00000125447|Q9NZ52-3|GGA3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3663940429688	2	577.368798	1152.72304	-0.31736	-0.00018324	-3.4769	-0.0020075	-3.7943	-0.0021907	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.72106	1	10452	10452		28.081	1.3886	1	6617600			23825	3390	16052	16062	27320	27320					0.1527912636227029
KSIVLQAAVPK	11	Unmodified	_KSIVLQAAVPK_					0	0	0		nc|ENSG00000125447|Q9NZ52-3|GGA3;nc|ENSG00000125447|Q9NZ52-4|GGA3;nc|ENSG00000125447|Q9NZ52-2|GGA3;ENSG00000125447|ENST00000537686|GGA3	nc|ENSG00000125447|Q9NZ52-3|GGA3	nc|ENSG00000125447|Q9NZ52-3|GGA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3675537109375	2	577.368798	1152.72304	-1.363	-0.00078696	-2.7149	-0.0015675	-4.0779	-0.0023544	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.638	4	10813	10669;10777;10791;10813		40.058	8.1033	1	14386000			23826	3390	16052	16062	27321;27322;27323;27324	27324					0.1527912636227029
KSKAAKEL	8	Unmodified	_KSKAAKEL_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;ENST00000476350.1_1_1:39768622-39838291:+|nuORF;ENSG00000116685|ENST00000376572|KIAA2013;nc|ENSG00000116685|Q8IYS2-2|KIAA2013	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7712707519531	2	437.77146	873.528367	-2.0028	-0.00087676	0.34136	0.00014944	-1.6614	-0.00072733	437.7717477191302	40.214	2.554	40.591	39.609	42.163	0.3765					138	67	4	0	0	0	0.87922	1	3320	3320		31.955	2.1133	1	10119000			23827	3510	16053	16063	27325	27325					0.08654375277126292
KSKAFSVVIQ	10	Unmodified	_KSKAFSVVIQ_					0	0	0		ENSG00000023608|ENST00000216294|SNAPC1	ENSG00000023608|ENST00000216294|SNAPC1	ENSG00000023608|ENST00000216294|SNAPC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8299560546875	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.86587	1	10718	10718		29.17	2.4771	1	5381700			23828	861	16054	16064	27326	27326					0.10094577919812764
KSKAPRVN	8	Unmodified	_KSKAPRVN_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2745056152344	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.88185	1	9479	9479		32.812	0.85756	1	26247000	+		23829	17066	16055	16065	27327	27327					0.08152313228515595
KSKAPRVN	8	Unmodified	_KSKAPRVN_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2743225097656	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.82658	2	10003	9627;10003		29.15	1.2673	1	47650000	+		23830	17066	16055	16065	27328;27329	27329					0.08152313228515595
KSKAPRVN	8	Unmodified	_KSKAPRVN_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27447509765625	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.81897	2	10086	9832;10086		29.15	3.6994	1	51820000	+		23831	17066	16055	16065	27330;27331	27331					0.08152313228515595
KSKAPRVN	8	Unmodified	_KSKAPRVN_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2739562988281	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.01	1	113.99	113.49	114.49	-0.024452								0	0	0	0.2939	1	12623	12623		27.882	5.9224	1		+		23832	17066	16055	16065	27332	27332					0.08152313228515595
KSKAPRVN	8	Unmodified	_KSKAPRVN_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2742614746094	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.82658	5	9978	9680;9978;10040;10088;10112		30.318	5.0922	1	51698000	+		23833	17066	16055	16065	27333;27334;27335;27336;27337	27334					0.08152313228515595
KSKAPRVN	8	Unmodified	_KSKAPRVN_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2750244140625	2	450.274701	898.534849	-1.2506	-0.00056311	0.52833	0.00023789	-0.72226	-0.00032522	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.87792	2	9582	9582;9617		34.173	6.0796	1	44812000	+		23834	17066	16055	16065	27338;27339	27338					0.08152313228515595
KSKAPRVN	8	Unmodified	_KSKAPRVN_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2745361328125	2	450.274701	898.534849	-1.7763	-0.00079984	1.0964	0.00049366	-0.67999	-0.00030618	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.8621	2	9562	9551;9562		27.882	1.2427	1	35178000	+		23835	17066	16055	16065	27340;27341	27341					0.08152313228515595
KSKAPRVN	8	Unmodified	_KSKAPRVN_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2734680175781	2	450.274701	898.534849	-1.7763	-0.00079983	1.9054	0.00085797	0.12912	5.8138E-05	450.2754829150514	95.155	2.0569	95.357	94.777	96.834	0.20242					114	48	3	0	0	0	0.8537	1	9750	9750		25.574	3.6142	1	856850	+		23836	17066	16055	16065	27342	27342					0.08152313228515595
KSKAPRVN	8	Unmodified	_KSKAPRVN_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2740783691406	2	450.274701	898.534849	-1.7762	-0.00079979	1.8456	0.00083102	0.069358	3.123E-05	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.81897	1	12252	12252		20.947	1.587	1	2494900	+		23837	17066	16055	16065	27343	27343					0.08152313228515595
KSKAPRVN	8	Unmodified	_KSKAPRVN_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2745361328125	2	450.274701	898.534849	0.49619	0.00022342	-0.76811	-0.00034586	-0.27192	-0.00012244	450.2742908789494	92.742	1.9986	93.189	92.476	94.475	0.44661					184	49	6	0	0	0	0.8537	1	11087	11087		25.574	3.6142	1	16577000	+		23838	17066	16055	16065	27344	27344					0.08152313228515595
KSKDKNIVSA	10	Unmodified	_KSKDKNIVSA_					0	0	0		ENSG00000139354|ENST00000547754|GAS2L3	ENSG00000139354|ENST00000547754|GAS2L3	ENSG00000139354|ENST00000547754|GAS2L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3165283203125	2	545.316763	1088.61897	1.9901	0.0010853	-2.103	-0.0011468	-0.1129	-6.1566E-05	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.86225	1	9324	9324		32.751	0.79567	1	4704900			23839	4366	16056	16066	27345	27345					0.07820799534761136
KSKDKNIVSA	10	Unmodified	_KSKDKNIVSA_					0	0	0		ENSG00000139354|ENST00000547754|GAS2L3	ENSG00000139354|ENST00000547754|GAS2L3	ENSG00000139354|ENST00000547754|GAS2L3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3165893554688	2	545.316763	1088.61897	0.15577	8.4944E-05	-0.048112	-2.6236E-05	0.10766	5.8708E-05	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.73395	4	8926	8926;8986;9166;9500		42.864	5.0528	1	17220000			23840	4366	16056	16066	27346;27347;27348;27349	27346					0.07820799534761136
KSKDKNIVSA	10	Unmodified	_KSKDKNIVSA_					0	0	0		ENSG00000139354|ENST00000547754|GAS2L3	ENSG00000139354|ENST00000547754|GAS2L3	ENSG00000139354|ENST00000547754|GAS2L3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.3167114257812	2	545.316763	1088.61897	0.73643	0.00040159	-0.91435	-0.00049861	-0.17792	-9.7022E-05	545.316117867523	88.493	3.0395	88.643	86.614	89.654	0.15055					258	71	4	0	0	0	0.86471	1	8763	8763		30.318	1.1682	1	5181100			23841	4366	16056	16066	27350	27350					0.07820799534761136
KSKDKSQME	9	Unmodified	_KSKDKSQME_					0	0	0		ENSG00000182621|ENST00000338037|PLCB1;nc|ENSG00000182621|Q9NQ66-2|PLCB1	ENSG00000182621|ENST00000338037|PLCB1	ENSG00000182621|ENST00000338037|PLCB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.271240234375	2	540.771331	1079.52811	0.53711	0.00029045	-3.8838	-0.0021003	-3.3467	-0.0018098	540.7690431902984	24.273	0.63344	24.227	23.918	24.551	-0.04598					28	13	3	0	0	0	0.41566	1	919	919		56.721	0	1	89385			23842	7465	16057	16067	27351	27351					-0.008474125050270231
KSKGAHKN	8	Unmodified	_KSKGAHKN_					0	0	0			REV__nc|ENSG00000137474|Q13402-5|MYO7A	REV__nc|ENSG00000137474|Q13402-5|MYO7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2518310546875	2	435.251226	868.487899	1.6601	0.00072257	-1.6819	-0.00073205	-0.021767	-9.474E-06	435.25040422889157	93.013	2.1505	92.951	91.863	94.014	-0.06144					107	50	3	0	0	0	0.84341	1	9854	9854		24.203	2.2429	1	812220	+		23843	19385	16058	16068	27352	27352					0.048394536773685104
KSKGRPHPR	9	Unmodified	_KSKGRPHPR_					0	0	0		ENSG00000162040|ENST00000454677|HS3ST6	ENSG00000162040|ENST00000454677|HS3ST6	ENSG00000162040|ENST00000454677|HS3ST6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.81787109375	2	531.817599	1061.62064	0.70533	0.00037511	-2.1628	-0.0011502	-1.4575	-0.00077513	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.7932	1	8386	8386		20.947	0.95016	1	1163300			23844	5664	16059	16069	27353	27353					0.09229898134026371
KSKHRITLIVD	11	Unmodified	_KSKHRITLIVD_					0	0	0		ENSG00000101680|ENST00000389658|LAMA1;ENST00000579014.5_1_18:6942080-7042306:-|nuORF;ENST00000492048.5_1_18:6942080-6955548:-|nuORF	ENSG00000101680|ENST00000389658|LAMA1	ENSG00000101680|ENST00000389658|LAMA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2677001953125	3	437.269866	1308.78777	-1.6775	-0.00073351	-2.9878	-0.0013065	-4.6653	-0.00204	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.75779	1	4461	4461		20.315	7.3575	1	2305800			23845	1955	16060	16070	27354	27354					0.14572701168253843
KSKHRITLIVD	11	Unmodified	_KSKHRITLIVD_					0	0	0		ENSG00000101680|ENST00000389658|LAMA1;ENST00000579014.5_1_18:6942080-7042306:-|nuORF;ENST00000492048.5_1_18:6942080-6955548:-|nuORF	ENSG00000101680|ENST00000389658|LAMA1	ENSG00000101680|ENST00000389658|LAMA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2672424316406	3	437.269866	1308.78777	-0.53561	-0.00023421	-3.9588	-0.0017311	-4.4944	-0.0019653	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.75779	1	4246	4246		20.315	1.784	1	4132000			23846	1955	16060	16070	27355	27355					0.14572701168253843
KSKHVAAR	8	Unmodified	_KSKHVAAR_					0	0	0			REV__nc|ENSG00000128656|P15882-2|CHN1	REV__nc|ENSG00000128656|P15882-2|CHN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.2588195800781	2	448.774868	895.535184	1.4218	0.00063806	-2.968	-0.001332	-1.5462	-0.00069391	448.77336802437037	90.174	0.73177	90.22	89.7	90.432	0.04644					24	16	2	0	0	0	0.4196	1	9326	9326		15.642	0	1	36824	+		23847	29833	16061	16071	27356	27356					0.08323732948360885
KSKKAQVRGSL	11	Unmodified	_KSKKAQVRGSL_					0	0	0		ENST00000480041.1_1_X:48854502-48855745:-|nuORF	ENST00000480041.1_1_X:48854502-48855745:-|nuORF	ENST00000480041.1_1_X:48854502-48855745:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2508239746094	3	401.250695	1200.73025	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.93	1	110.98	110.48	111.48	0.054062								0	0	0	0.56276	1	13424	13424		33.039	6.976	1				23848	12427	16062	16072	27357	27357					0.1379185896269064
KSKKGKSKN	9	Unmodified	_KSKKGKSKN_					0	0	0			REV__ENST00000511044.1_1_5:141242715-141245657:-|nuORF	REV__ENST00000511044.1_1_5:141242715-141245657:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	502.8139343261719	2	502.81419	1003.61383	0.77487	0.00038961	-1.7608	-0.00088536	-0.98594	-0.00049575	502.8133310235605	97.118	3.7782	97.281	96.705	100.48	0.16317					264	87	5	0	0	0	0.7932	1	10111	10111		24.519	2.5593	1	19692000	+		23849	20486	16063	16073	27358	27358					0.11216540462794455
KSKKGPPRQAK	11	Unmodified	_KSKKGPPRQAK_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.92205810546875	3	408.922689	1223.74624	0.73411	0.0003002	-1.7974	-0.00073501	-1.0633	-0.00043482	408.92190975649805	104.5	3.3645	104.62	103.39	106.76	0.11684					226	83	5	0	0	0	0.74763	1	11167	11167		20.315	0	1	4256600			23850	1504	16064	16074	27359	27359					0.14331565199586294
KSKKKLCALYG	11	Unmodified	_KSKKKLCALYG_					0	0	0		nc|ENSG00000141447|Q9BXW6-2|OSBPL1A;nc|ENSG00000141447|Q9BXW6-4|OSBPL1A;ENSG00000141447|ENST00000319481|OSBPL1A	nc|ENSG00000141447|Q9BXW6-2|OSBPL1A	nc|ENSG00000141447|Q9BXW6-2|OSBPL1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8692626953125	2	619.868108	1237.72166	1.2689	0.00078657	0.89125	0.00055246	2.1602	0.001339	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.72918	1	9892	9892		26.693	2.1737	1	6493200			23851	4501	16065	16075	27360	27360					0.11231169001871422
KSKKLSVQGG	10	Unmodified	_KSKKLSVQGG_					0	0	0			REV__ENSG00000126461|ENST00000360565|SCAF1	REV__ENSG00000126461|ENST00000360565|SCAF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3121337890625	2	516.314023	1030.61349	-1.5618	-0.0008064	2.0676	0.0010675	0.50574	0.00026112	516.315128223729	103.33	1.0546	103.45	103.07	104.12	0.11494					63	26	3	0	0	0	0.85633	1	10951	10951		21.686	1.689	1	813320	+		23852	18701	16066	16076	27361	27361					0.09941120742928433
KSKKSLIGGN	10	Unmodified	_KSKKSLIGGN_					0	0	0		ENSG00000179542|ENST00000356928|SLITRK4	ENSG00000179542|ENST00000356928|SLITRK4	ENSG00000179542|ENST00000356928|SLITRK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3145751953125	2	516.314023	1030.61349	0.87306	0.00045078	-0.64648	-0.00033379	0.22658	0.00011699	516.313661473355	102.18	1.1387	102.22	101.81	102.94	0.043198					71	27	3	0	0	0	0.86047	1	11052	11052		23.523	0.48021	1	705960			23853	7277	16067	16077	27362	27362					0.0994112074295117
KSKKTIQH	8	Unmodified	_KSKKTIQH_					0	0	0			REV__nc|ENSG00000181381|Q5H9U9-2|DDX60L	REV__nc|ENSG00000181381|Q5H9U9-2|DDX60L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2956237792969	2	485.295633	968.576714	-0.71733	-0.00034812	0.34351	0.0001667	-0.37382	-0.00018142	485.29578634245615	102.08	1.1376	102.28	101.8	102.94	0.19484					38	27	2	0	0	0	0.87064	1	10737	10737		29.15	2.3535	1	498200	+		23854	22455	16068	16078	27363	27363					0.09116868917044485
KSKKTIQHPKT	11	Unmodified	_KSKKTIQHPKT_					0	0	0			REV__nc|ENSG00000181381|Q5H9U9-2|DDX60L	REV__nc|ENSG00000181381|Q5H9U9-2|DDX60L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.59735107421875	3	432.597983	1294.77212	1.8145	0.00078493	-2.7981	-0.0012105	-0.98367	-0.00042553	432.59669589863887	105.91	1.0201	106.04	105.7	106.72	0.12742					97	40	4	0	0	0	0.68431	1	12898	12898		25.234	0	1	823850	+		23855	22455	16069	16079	27364	27364					0.13652414651210165
KSKLIRSQSF	10	Unmodified	_KSKLIRSQSF_					0	0	0		ENSG00000119698|ENST00000304338|PPP4R4	ENSG00000119698|ENST00000304338|PPP4R4	ENSG00000119698|ENST00000304338|PPP4R4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.35595703125	2	597.35368	1192.69281	-0.44906	-0.00026825	4.07	0.0024312	3.6209	0.002163	597.3558318178953	59.116	1.0301	59.669	59.089	60.119	0.55323					59	25	3	0	0	0	0.73395	1	6244	6244		42.864	0.46813	1	568150			23856	3089	16070	16080	27365	27365					0.10416767697074647
KSKLLDNLLV	10	Unmodified	_KSKLLDNLLV_					0	0	0			REV__ENST00000494601.5_1_2:172848237-172848321:+|nuORF	REV__ENST00000494601.5_1_2:172848237-172848321:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.2922973632812	2	571.860806	1141.70706	0.60291	0.00034478	-3.8994	-0.0022299	-3.2965	-0.0018851	572.3597412500076	17.247	0.18537	16.636	16.52	16.706	-0.6107					5	3	2	0	0	0	0.37624	1	242	242		19.104	0	1	26022	+		23857	27721	16071	16081	27366	27366					0.14187420125358585
KSKPFVAP	8	Unmodified	_KSKPFVAP_					0	0	0		ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B	ENSG00000008869|ENST00000233099|HEATR5B	ENSG00000008869|ENST00000233099|HEATR5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2644348144531	2	437.263271	872.511988	1.5079	0.00065936	4.3859	0.0019178	5.8938	0.0025772	437.26518584977657	27.503	2.0915	27.248	26.544	28.636	-0.25465					92	49	2	0	0	0	0.91977	1	1572	1572		45.952	8.9235	1	428760			23858	751	16072	16082	27367	27367					0.07063294111026153
KSKPIVKYFTV	11	Unmodified	_KSKPIVKYFTV_					0	0	0			REV__ENSG00000089248|ENST00000261735|ERP29	REV__ENSG00000089248|ENST00000261735|ERP29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2679443359375	3	437.267463	1308.78056	1.1681	0.00051075	-0.25998	-0.00011368	0.90808	0.00039707	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.76892	1	4650	4650		17.833	0	1	4130900	+		23859	16967	16073	16083	27368	27368					0.13851968567837503
KSKPVLFVN	9	Unmodified	_KSKPVLFVN_					0	0	0			REV__nc|ENSG00000116044|Q16236-3|NFE2L2	REV__nc|ENSG00000116044|Q16236-3|NFE2L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.31201171875	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.3064	-0.0011908	-3.8683	-0.0019972	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.77696	1	10780	10780		31.53	4.4825	1	1268100	+		23860	18175	16074	16084	27369	27369					0.10343210236646883
KSKRNIILG	9	Unmodified	_KSKRNIILG_					0	0	0		ENSG00000142408|ENST00000270458|CACNG8	ENSG00000142408|ENST00000270458|CACNG8	ENSG00000142408|ENST00000270458|CACNG8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.8141479492188	2	514.832383	1027.65021	0.81695	0.00042059	4.1223	0.0021223	4.9392	0.0025429	514.834939555809	16.653	0.13711	16.166	16.052	16.189	-0.48718					4	2	2	0	0	0	0.20789	1	148	148		26.693	0	1	16232			23861	4562	16075	16085	27370	27370					0.13749417359508698
KSKRQLGSA	9	Unmodified	_KSKRQLGSA_					0	0	0			REV__ENST00000579323.5_2_17:71161213-71164112:+|nuORF	REV__ENST00000579323.5_2_17:71161213-71164112:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7906799316406	2	487.790715	973.566878	0.84663	0.00041298	-1.0594	-0.00051676	-0.21277	-0.00010379	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.77244	1	8639	8639		32.812	2.3088	1	2238600	+		23862	25415	16076	16086	27371	27371					0.0790368091164737
KSKRSALEN	9	Unmodified	_KSKRSALEN_					0	0	0		nc|ENSG00000168297|Q7Z7A4-7|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-3|PXK;nc|ENSG00000168297|Q7Z7A4-5|PXK;chr3:58409618-58410093|17|13.24|0.47|4.82|+|0|PXK,None|1	nc|ENSG00000168297|Q7Z7A4-7|PXK	nc|ENSG00000168297|Q7Z7A4-7|PXK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7928466796875	2	516.793455	1031.57236	1.5571	0.00080467	-1.5393	-0.0007955	0.017752	9.1739E-06	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.77696	1	9116	9116		31.53	4.7337	1	834930			23863	6389	16077	16087	27372	27372					0.057833597034687045
KSKSACSD	8	Unmodified	_KSKSACSD_					0	0	0		nc|ENSG00000159082|O43426|SYNJ1	nc|ENSG00000159082|O43426|SYNJ1	nc|ENSG00000159082|O43426|SYNJ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.1939697265625	2	413.192185	824.369817	0.83061	0.0003432	1.9181	0.00079255	2.7487	0.0011358	413.1932909391075	85.831	2.7525	85.757	84.67	87.423	-0.073761					147	63	4	0	0	0	0.90523	1	8801	8801		40.778	10.937	1	1300900			23864	15031	16078	16088	27373	27373					-0.04939286693468148
KSKSGRGL	8	Unmodified	_KSKSGRGL_					0	0	0		ENSG00000188730|ENST00000340652|VWC2	ENSG00000188730|ENST00000340652|VWC2	ENSG00000188730|ENST00000340652|VWC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2581787109375	2	416.753601	831.49265	-0.3703	-0.00015432	3.7756	0.0015735	3.4053	0.0014192	416.75517336062245	57.27	1.3693	57.664	57.369	58.738	0.39407					84	33	4	0	0	0	0.84579	1	5927	5927		24.519	4.0374	1	8073300			23865	7952	16079	16089	27374	27374					0.07016337820130047
KSKSHGVG	8	Unmodified	_KSKSHGVG_					0	0	0		nc|ENSG00000186416|O15226|NKRF;nc|ENSG00000186416|O15226-2|NKRF;ENSG00000186416|ENST00000688521|NKRF	nc|ENSG00000186416|O15226|NKRF	nc|ENSG00000186416|O15226|NKRF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2262268066406	2	400.224677	798.434801	1.1683	0.00046758	3.5853	0.0014349	4.7536	0.0019025	400.2259734207164	34.839	1.4569	35.22	34.977	36.434	0.3812					102	37	3	0	0	0	0.89043	1	2759	2759		35.618	1.4457	1	1604200			23866	7794	16080	16090	27375	27375					0.027520758947161994
KSKSRGLG	8	Unmodified	_KSKSRGLG_					0	0	0			REV__ENSG00000099904|ENST00000334554|ZDHHC8	REV__ENSG00000099904|ENST00000334554|ZDHHC8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7550964355469	2	416.753601	831.49265	0.85655	0.00035697	2.7214	0.0011341	3.5779	0.0014911	416.7546905427035	66.077	1.7412	66.462	65.937	67.678	0.38581					138	48	4	0	0	0	0.90089	3	7169	7169;7211;7245		39.253	2.2244	1	3980900	+		23867	17115	16081	16091	27376;27377;27378	27376					0.07016337820141416
KSKSSLAL	8	Unmodified	_KSKSSLAL_					0	0	0		ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37;ENST00000473554.5_1_2:219337952-219344428:-|nuORF	ENSG00000135913|ENST00000258399|USP37	ENSG00000135913|ENST00000258399|USP37	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2582702636719	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.79929	1	523	523		18.324	4.5491	1	867930			23868	4064	16082	16092	27379	27379					0.07886686385802477
KSKSSLAL	8	Unmodified	_KSKSSLAL_					0	0	0		ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37;ENST00000473554.5_1_2:219337952-219344428:-|nuORF	ENSG00000135913|ENST00000258399|USP37	ENSG00000135913|ENST00000258399|USP37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.25714111328125	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.7961	3	1025	904;916;1025		20.482	1.1219	1	1763000			23869	4064	16082	16092	27380;27381;27382	27382					0.07886686385802477
KSKSSLAL	8	Unmodified	_KSKSSLAL_					0	0	0		ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37;ENST00000473554.5_1_2:219337952-219344428:-|nuORF	ENSG00000135913|ENST00000258399|USP37	ENSG00000135913|ENST00000258399|USP37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2583312988281	2	417.258185	832.501818	0.52563	0.00021932	-0.071237	-2.9724E-05	0.45439	0.0001896	417.2580621570988	22.515	2.686	21.904	21.633	24.319	-0.6107					140	63	3	0	0	0	0.80963	4	980	944;956;980;989		20.482	5.8177	1	2260100			23870	4064	16082	16092	27383;27384;27385;27386	27385					0.07886686385802477
KSKTIPRN	8	Unmodified	_KSKTIPRN_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28704833984375	2	472.287808	942.561064	-0.024015	-1.1342E-05	0.7135	0.00033698	0.68949	0.00032564	472.2881848861931	99.149	1.6194	99.196	98.809	100.43	0.047531					85	37	3	0	0	0	0.88601	1	10602	10602		34.173	6.2903	1	514560	+		23871	29635	16083	16093	27387	27387					0.08748582399982752
KSKTIPRN	8	Unmodified	_KSKTIPRN_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2870788574219	2	472.287808	942.561064	-0.91025	-0.0004299	1.4853	0.00070148	0.57502	0.00027158	472.2885293382865	99.077	1.813	99.3	98.699	100.51	0.22263					102	42	3	0	0	0	0.87479	1	10284	10284		30.504	1.3541	1	580890	+		23872	29635	16083	16093	27388	27388					0.08748582399982752
KSKTIPRN	8	Unmodified	_KSKTIPRN_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2878723144531	2	472.287808	942.561064	-1.7052	-0.00080535	2.0866	0.00098547	0.38138	0.00018012	472.2887688366916	99.113	1.9296	99.299	98.808	100.74	0.18582					95	44	3	0	0	0	0.89043	1	10232	10232		35.618	0.41757	1	583920	+		23873	29635	16083	16093	27389	27389					0.08748582399982752
KSKTIPRN	8	Unmodified	_KSKTIPRN_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|37|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2876892089844	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.86677	1	12258	12258		27.882	4.8398	1	3080300	+		23874	29635	16083	16093	27390	27390					0.08748582399982752
KSKTLRQVS	9	Unmodified	_KSKTLRQVS_					0	0	0			REV__nc|ENSG00000173193|Q460N5-3|PARP14;REV__nc|ENSG00000173193|Q460N5-5|PARP14	REV__nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.3203735351562	2	523.819473	1045.62439	2.4724	0.0012951	-0.8392	-0.00043959	1.6332	0.00085552	523.8192193723954	107.75	0.79723	107.85	107.16	107.96	0.10396					58	30	2	0	0	0	0.78912	1	13126	13126		28.081	1.2854	1	1011100	+		23875	21898;30035	16084	16094	27391	27391					0.1034052311722462
KSKVDDLVL	9	Unmodified	_KSKVDDLVL_					0	0	0			REV__nc|ENSG00000204965|Q9Y5H7-2|PCDHA5	REV__nc|ENSG00000204965|Q9Y5H7-2|PCDHA5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7711181640625	2	508.802957	1015.59136	0.69653	0.0003544	-1.8136	-0.00092275	-1.117	-0.00056835	508.80209494423974	34.053	0.33455	34.263	34.065	34.4	0.21002					14	7	2	0	0	0	0.20789	1	2483	2483		62.107	0	1	77564	+		23876	30166	16085	16095	27392	27392					0.08418896274497456
KSKVSLNV	8	Unmodified	_KSKVSLNV_					0	0	0			REV__nc|ENSG00000144674|Q13439-3|GOLGA4	REV__nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.771240234375	2	437.77146	873.528367	0.18916	8.281E-05	-0.44353	-0.00019417	-0.25437	-0.00011136	437.77124644611854	39.786	1.476	39.875	39.186	40.662	0.088375					62	41	2	0	0	0	0.80959	1	2499	2499		15.642	0	1	3151300	+		23877	19907	16086	16096	27393	27393					0.08654375277126292
KSLAAGVTK	9	Unmodified	_KSLAAGVTK_					0	0	0		nc|ENSG00000141441|Q9H706-2|GAREM1;nc|ENSG00000141441|Q9H706-3|GAREM1;ENSG00000141441|ENST00000269209|GAREM1	nc|ENSG00000141441|Q9H706-2|GAREM1	nc|ENSG00000141441|Q9H706-2|GAREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77105712890625	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.7932	1	2343	2343		14.865	1.0895	1	1041500			23878	4499	16087	16097	27394	27394					0.0865437527713766
KSLAAGVTK	9	Unmodified	_KSLAAGVTK_					0	0	0		nc|ENSG00000141441|Q9H706-2|GAREM1;nc|ENSG00000141441|Q9H706-3|GAREM1;ENSG00000141441|ENST00000269209|GAREM1	nc|ENSG00000141441|Q9H706-2|GAREM1	nc|ENSG00000141441|Q9H706-2|GAREM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77117919921875	2	437.77146	873.528367	-0.99724	-0.00043656	0.50542	0.00022126	-0.49182	-0.0002153	437.77179407937126	38.831	0.76415	39.173	38.896	39.661	0.34187					66	17	5	0	0	0	0.7932	1	3241	3241		24.519	2.5593	1	15326000			23879	4499	16087	16097	27395	27395					0.0865437527713766
KSLAAGVTK	9	Unmodified	_KSLAAGVTK_					0	0	0		nc|ENSG00000141441|Q9H706-2|GAREM1;nc|ENSG00000141441|Q9H706-3|GAREM1;ENSG00000141441|ENST00000269209|GAREM1	nc|ENSG00000141441|Q9H706-2|GAREM1	nc|ENSG00000141441|Q9H706-2|GAREM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77130126953125	2	437.77146	873.528367	-0.63876	-0.00027963	0.070293	3.0772E-05	-0.56847	-0.00024886	437.77162175664915	38.677	1.0193	39.199	38.87	39.89	0.52235					96	23	6	0	0	0	0.7932	1	3205	3205		20.947	0.95016	1	19739000			23880	4499	16087	16097	27396	27396					0.0865437527713766
KSLCSRGMYY	10	Unmodified	_KSLCSRGMYY_					0	0	0		nc|ENSG00000170854|Q8IUF8-2|RIOX2;nc|ENSG00000170854|Q8IUF8-4|RIOX2;ENSG00000170854|ENST00000394198|RIOX2	nc|ENSG00000170854|Q8IUF8-2|RIOX2	nc|ENSG00000170854|Q8IUF8-2|RIOX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.284423828125	2	604.283551	1206.55255	-0.10714	-6.4745E-05	2.7915	0.0016869	2.6844	0.0016221	604.2851451198585	29.872	0.8398	29.897	29.538	30.377	0.025013					42	21	3	0	0	0	0.81117	1	1523	1523		38.754	0.94209	1	166430			23881	6619	16088	16098	27397	27397					-0.04246475623153856
KSLEKRLPE	9	Unmodified	_KSLEKRLPE_					0	0	0			REV__ENSG00000171451|ENST00000310045|DSEL	REV__ENSG00000171451|ENST00000310045|DSEL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.3274536132812	2	550.327131	1098.63971	0.84562	0.00046537	-0.71285	-0.0003923	0.13278	7.307E-05	550.3267482489723	100.06	1.2234	100.21	99.636	100.86	0.15073					67	27	3	0	0	0	0.78536	1	10481	10481		29.15	1.2673	1	401350	+		23882	21729	16089	16099	27398	27398					0.09433389914443069
KSLINVRN	8	Unmodified	_KSLINVRN_					0	0	0		ENST00000435989.6_1_19:58384023-58384878:-|nuORF	ENST00000435989.6_1_19:58384023-58384878:-|nuORF	ENST00000435989.6_1_19:58384023-58384878:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.286376953125	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.82658	1	12456	12456		21.96	0	1	3080300			23883	11718	16090	16100	27399	27399					0.0874858239999412
KSLKAMAKSY	10	Unmodified	_KSLKAMAKSY_					0	0	0			REV__ENST00000601247.5_1_19:17858586-17877404:+|nuORF	REV__ENST00000601247.5_1_19:17858586-17877404:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.8154907226562	2	563.818084	1125.62162	-0.37723	-0.00021269	-1.98	-0.0011164	-2.3573	-0.0013291	563.8171367706988	53.744	1.0641	53.72	53.305	54.369	-0.02475					38	26	2	0	0	0	0.86698	1	4818	4818		28.081	0.19925	1	113200	+		23884	15687	16091	16101	27400	27400					0.0638293166805397
KSLKGLHAASD	11	Unmodified	_KSLKGLHAASD_					0	0	0			REV__nc|ENSG00000168016|O15050|TRANK1	REV__nc|ENSG00000168016|O15050|TRANK1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.8162231445312	2	563.814387	1125.61422	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.029	1	56.128	55.628	56.628	0.099186								0	0	0	0.56276	1	4722	4722		28.577	0.49524	1		+		23885	21451	16092	16102	27401	27401					0.0564391539198823
KSLKGYFAQKI	11	Unmodified	_KSLKGYFAQKI_					0	0	0			REV__ENSG00000171456|ENST00000375687|ASXL1	REV__ENSG00000171456|ENST00000375687|ASXL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.882568359375	2	641.87953	1281.74451	2.2004	0.0014124	2.3254	0.0014926	4.5258	0.002905	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.60687	1	10393	10393		43.651	8.0325	1	3624200	+		23886	21731	16093	16103	27402	27402					0.11490511390979918
KSLKGYFAQKI	11	Unmodified	_KSLKGYFAQKI_					0	0	0			REV__ENSG00000171456|ENST00000375687|ASXL1	REV__ENSG00000171456|ENST00000375687|ASXL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8826904296875	2	641.87953	1281.74451	1.6823	0.0010798	2.8836	0.0018509	4.5658	0.0029307	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.60058	1	10507	10507		44.377	1.5129	1	3772700	+		23887	21731	16093	16103	27403	27403					0.11490511390979918
KSLKGYFAQKI	11	Unmodified	_KSLKGYFAQKI_					0	0	0			REV__ENSG00000171456|ENST00000375687|ASXL1	REV__ENSG00000171456|ENST00000375687|ASXL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8822631835938	2	641.87953	1281.74451	1.5974	0.0010254	2.9074	0.0018662	4.5048	0.0028915	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.68532	1	10126	10126		33.922	5.8401	1	4266200	+		23888	21731	16093	16103	27404	27404					0.11490511390979918
KSLKGYFAQKI	11	Unmodified	_KSLKGYFAQKI_					0	0	0			REV__ENSG00000171456|ENST00000375687|ASXL1	REV__ENSG00000171456|ENST00000375687|ASXL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8824462890625	2	641.87953	1281.74451	0.91411	0.00058675	3.6201	0.0023236	4.5342	0.0029104	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.62614	1	10183	10183		41.427	0.64845	1	4136300	+		23889	21731	16093	16103	27405	27405					0.11490511390979918
KSLKKDPPH	9	Unmodified	_KSLKKDPPH_					0	0	0			REV__ENSG00000186051|ENST00000334077|TAL2	REV__ENSG00000186051|ENST00000334077|TAL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.8156127929688	2	525.308741	1048.60293	4.3706	0.0022959	3.7663	0.0019785	8.1369	0.0042744	525.8133681798666	106.13	0.67313	106.32	105.97	106.64	0.18647					74	28	4	0	0	0	0.7932	1	13006	13006		23.042	1.0826	1	163420	+		23890	20806	16094	16104	27406	27406					0.08057138088497595
KSLKSHECLL	10	Unmodified	_KSLKSHECLL_					0	0	0			REV__ENSG00000127311|ENST00000247815|HELB	REV__ENSG00000127311|ENST00000247815|HELB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	579.8436279296875	2	579.320991	1156.62743	0.6753	0.00039121	-2.0951	-0.0012137	-1.4198	-0.00082251	579.3197474340095	102.1	0.67292	102.29	101.93	102.6	0.19484					22	16	2	0	0	0	0.37624	1	10730	10730		39.253	0	1	139460	+		23891	18726	16095	16105	27407	27407					0.05538030179741327
KSLKVLQRLSH	11	Unmodified	_KSLKVLQRLSH_					0	0	0			REV__ENSG00000177000|ENST00000376590|MTHFR	REV__ENSG00000177000|ENST00000376590|MTHFR	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2672424316406	3	436.941861	1307.80375	-1.7385	-0.0007596	-2.753	-0.0012029	-4.4914	-0.0019625	436.94066800196276	49.838	1.3104	49.838	49.229	50.539	0					48	30	2	0	0	0	0.17437	1	4022	4022		15.337	0	1	56490	+		23892	22171	16096	16106	27408	27408					0.1621640740515886
KSLLFFGTLHK	11	Unmodified	_KSLLFFGTLHK_					0	0	0		chr1:172256345-172308728|16|19.06|0.0|20.86|+|2|TE_info:L1M5,L1M5_dup2687,L1,LINE,donor,-,172255742,172256345|None,DNM3|15	chr1:172256345-172308728|16|19.06|0.0|20.86|+|2|TE_info:L1M5,L1M5_dup2687,L1,LINE,donor,-,172255742,172256345|None,DNM3|15	chr1:172256345-172308728|16|19.06|0.0|20.86|+|2|TE_info:L1M5,L1M5_dup2687,L1,LINE,donor,-,172255742,172256345|None,DNM3|15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	645.88427734375	2	645.882073	1289.74959	1.8764	0.0012119	0.61198	0.00039526	2.4884	0.0016072	645.8823845772775	105.75	1.6428	105.79	105.12	106.77	0.038322					94	38	3	0	0	0	0.72106	1	11558	11558		28.081	3.5623	1	1452000			23893	33	16097	16107	27409	27409					0.11630815253602123
KSLLLKAVVSG	11	Unmodified	_KSLLLKAVVSG_					0	0	0		ENSG00000130935|ENST00000253247|NOL11;ENST00000580914.1_1_17:65720296-65722769:+|nuORF	ENSG00000130935|ENST00000253247|NOL11	ENSG00000130935|ENST00000253247|NOL11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.9609985351562	2	557.863349	1113.71214	0.13774	7.6842E-05	4.0733	0.0022723	4.211	0.0023492	557.8659551502603	17.641	0.13503	17.704	17.602	17.737	0.062601					8	6	2	0	0	0	0.17625	1	259	259		29.17	12.697	1	89279			23894	3696	16098	16108	27410	27410					0.15983723987983467
KSLLNLTLH	9	Unmodified	_KSLLNLTLH_					0	0	0			REV__nc|ENSG00000056586|Q9HBD1-6|RC3H2	REV__nc|ENSG00000056586|Q9HBD1-6|RC3H2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.818359375	2	519.818941	1037.62333	0.066288	3.4458E-05	-1.3041	-0.00067792	-1.2379	-0.00064346	519.8181781419161	84.428	1.8402	84.864	83.581	85.421	0.43538					115	44	4	0	0	0	0.19818	5	9742	9742;9764;9802;9813;9835		74.255	6.7668	1	6841200	+		23895	16421	16099	16109	27411;27412;27413;27414;27415	27411					0.10602308748320866
KSLLSINYI	9	Unmodified	_KSLLSINYI_					0	0	0			REV__ENST00000381626.6_1_7:33054112-33054307:-|nuORF	REV__ENST00000381626.6_1_7:33054112-33054307:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8164672851562	2	525.813325	1049.6121	2.4203	0.0012726	1.7287	0.00090898	4.149	0.0021816	525.8148344392195	106.1	1.1594	106.23	105.62	106.78	0.12742					80	45	3	0	0	0	0.69624	1	12943	12943		40.778	3.6191	1	143960	+		23896	25970	16100	16110	27416	27416					0.08927486654192762
KSLNGYKN	8	Unmodified	_KSLNGYKN_					0	0	0		nc|ENSG00000230257|Q86UQ8|NFE4	nc|ENSG00000230257|Q86UQ8|NFE4	nc|ENSG00000230257|Q86UQ8|NFE4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.2649841308594	2	462.250892	922.48723	1.741	0.00080478	1.547	0.00071509	3.288	0.0015199	462.2521175987768	93.193	1.1216	93.131	92.72	93.842	-0.06144					50	26	3	0	0	0	0.4196	1	9864	9864		30.504	0	1	206600			23897	15269	16101	16111	27417	27417					0.022886142376592034
KSLNLVRLQH	10	Unmodified	_KSLNLVRLQH_					0	0	0			REV__ENSG00000179796|ENST00000396641|LRRC3B	REV__ENSG00000179796|ENST00000396641|LRRC3B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3663940429688	2	604.367121	1206.71969	-0.16822	-0.00010167	-0.91026	-0.00055013	-1.0785	-0.0006518	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.82886	1	10941	10941		37.812	3.8899	1	47715000	+		23898	22355	16102	16112	27418	27418					0.12459876308275852
KSLPGKILGHT	11	Unmodified	_KSLPGKILGHT_					0	0	0			REV__ENSG00000160994|ENST00000292574|CCDC105	REV__ENSG00000160994|ENST00000292574|CCDC105	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.849365234375	2	575.850773	1149.68699	1.0918	0.00062874	-2.7114	-0.0015614	-1.6196	-0.00093263	575.8487260820142	102.59	0.30335	102.82	102.57	102.87	0.22556					17	7	3	0	0	0	0.732	1	12447	12447		26.063	0.48933	1	522000	+		23899	20755	16103	16113	27419	27419					0.11813669185403342
KSLQIVLPARA	11	Unmodified	_KSLQIVLPARA_					0	0	0		nc|ENSG00000105339|A2RUS2-2|DENND3;nc|ENSG00000105339|A2RUS2|DENND3;ENSG00000105339|ENST00000519811|DENND3	nc|ENSG00000105339|A2RUS2-2|DENND3	nc|ENSG00000105339|A2RUS2-2|DENND3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	598.3804931640625	2	598.379697	1194.74484	0.35601	0.00021303	2.8174	0.0016859	3.1735	0.0018989	598.3813089320432	40.572	1.0575	40.654	40.231	41.288	0.081345					56	37	2	0	0	0	0.75164	1	2610	2610		21.686	0.73882	1	302330			23900	2205	16104	16114	27420	27420					0.15525931110823876
KSLRHMRQV	9	Oxidation (M)	_KSLRHM(Oxidation (M))RQV_		KSLRHM(1)RQV		KSLRHM(55)RQV	0	0	1		ENSG00000154803|ENST00000285071|FLCN;ENST00000427497.3_1_17:17110364-17131447:-|nuORF;ENST00000577591.1_1_17:17120364-17122368:-|nuORF	ENSG00000154803|ENST00000285071|FLCN	ENSG00000154803|ENST00000285071|FLCN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	585.8306274414062	2	585.829849	1169.64514	0.36546	0.0002141	0.43186	0.000253	0.79731	0.00046709	585.8299498087534	57.741	1.3417	57.711	57.197	58.539	-0.029865					92	38	3	0	0	0	0.44421	1	5314	5314		54.776	16.965	1	120850			23901	5297	16105	16115	27421	27421		91			0.06710790225224628
KSLRRRTRNL	10	Unmodified	_KSLRRRTRNL_					0	0	0		ENST00000432054.6_1_3:129389755-129389863:-|nuORF	ENST00000432054.6_1_3:129389755-129389863:-|nuORF	ENST00000432054.6_1_3:129389755-129389863:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	3	433.940855	1298.80073	0.18165	7.8826E-05	-2.4304	-0.0010547	-2.2487	-0.00097582	434.27424110182676	39.359	0.092995	39.447	39.396	39.489	0.088375					4	2	2	0	0	0	0.37624	1	2409	2409		25.126	5.0955	1	17970			23902	11659	16106	16116	27422	27422					0.16328577071021755
KSLRTHKHI	9	Unmodified	_KSLRTHKHI_					0	0	0		L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3400268554688	2	560.340907	1118.66726	-1.1297	-0.00063301	-0.12552	-7.0334E-05	-1.2552	-0.00070335	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.6204	1	11317	11317		45.972	5.1941	1	84412000			23903	14585	16107	16117	27423	27423					0.11267337965296065
KSLRTHKHI	9	Unmodified	_KSLRTHKHI_					0	0	0		L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.339599609375	2	560.340907	1118.66726	3.1431	0.0017612	-3.9763	-0.0022281	-0.83313	-0.00046684	560.3385698179089	105.88	1.8636	105.84	105.1	106.97	-0.03714					103	43	3	0	0	0	0.78528	1	11766	11766		29.17	4.9673	1	1086900			23904	14585	16107	16117	27424	27424					0.11267337965296065
KSLRTHKHI	9	Unmodified	_KSLRTHKHI_					0	0	0		L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3404541015625	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.73802	7	11154	11132;11154;11166;11191;11239;11348;11409		37.812	4.9991	1	81463000			23905	14585	16107	16117	27425;27426;27427;27428;27429;27430;27431	27426					0.11267337965296065
KSLRTHKHI	9	Unmodified	_KSLRTHKHI_					0	0	0		L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3401489257812	2	560.340907	1118.66726	0.39666	0.00022227	-1.7464	-0.00097859	-1.3498	-0.00075633	560.3399034928755	102.04	3.4939	102.24	101.58	105.08	0.19484					369	86	7	0	0	0	0.73802	1	11152	11152		37.812	4.9991	1	135510000			23906	14585	16107	16117	27432	27432					0.11267337965296065
KSLRTHKHI	9	Unmodified	_KSLRTHKHI_					0	0	0		L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.340087890625	2	560.340907	1118.66726	0.86176	0.00048288	-2.22	-0.001244	-1.3582	-0.00076107	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.76419	8	11102	10870;10884;10897;10909;10921;10933;10960;11102		35.152	6.115	1	126390000			23907	14585	16107	16117	27433;27434;27435;27436;27437;27438;27439;27440	27440					0.11267337965296065
KSLRTHKHI	9	Unmodified	_KSLRTHKHI_					0	0	0		L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3404541015625	2	560.340907	1118.66726	-1.4184	-0.00079481	0.068089	3.8153E-05	-1.3504	-0.00075666	560.3408991920513	102.18	3.487	102.32	101.71	105.2	0.13569					387	86	7	0	0	0	0.77244	2	10938	10938;11034		32.812	1.2826	1	120110000			23908	14585	16107	16117	27441;27442	27441					0.11267337965296065
KSLRTHKHI	9	Unmodified	_KSLRTHKHI_					0	0	0		L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3397216796875	2	560.340907	1118.66726	-1.4184	-0.0007948	0.74394	0.00041686	-0.67448	-0.00037794	560.3412485593329	105.6	1.2349	105.67	104.77	106	0.073112					105	30	5	0	0	0	0.73802	1	11232	11232		37.812	3.8899	1	1607400			23909	14585	16107	16117	27443	27443					0.11267337965296065
KSLRTHKHI	9	Unmodified	_KSLRTHKHI_					0	0	0		L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3406372070312	2	560.340907	1118.66726	-1.4185	-0.00079484	0.46581	0.00026101	-0.95269	-0.00053383	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.77696	4	12248	12107;12239;12248;12508		31.53	1.7386	1	4071000			23910	14585	16107	16117	27444;27445;27446;27447	27446					0.11267337965296065
KSLRTHKHI	9	Unmodified	_KSLRTHKHI_					0	0	0		L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.34033203125	2	560.340907	1118.66726	2.2618	0.0012674	-3.4816	-0.0019509	-1.2198	-0.00068351	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.76419	2	12355	12355;12367		35.152	3.1972	1	14759000			23911	14585	16107	16117	27448;27449	27448					0.11267337965296065
KSLRTHKHI	9	Unmodified	_KSLRTHKHI_					0	0	0		L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3402709960938	2	560.340907	1118.66726	2.9009	0.0016255	-4.143	-0.0023215	-1.2421	-0.00069599	560.3384791854071	101.98	1.2376	102.3	101.86	103.1	0.32511					132	30	6	0	0	0	0.78124	2	12419	12419;12491		30.318	4.7437	1	15824000			23912	14585	16107	16117	27450;27451	27450					0.11267337965296065
KSLSARFA	8	Unmodified	_KSLSARFA_					0	0	0			REV__ENSG00000170950|ENST00000304801|PGK2;REV__ENSG00000102144|ENST00000373316|PGK1	REV__ENSG00000170950|ENST00000304801|PGK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.255615234375	2	440.255977	878.497401	-1.4738	-0.00064887	0.086968	3.8288E-05	-1.3869	-0.00061058	440.25587856693164	74.805	0.55187	74.931	74.623	75.175	0.12545					25	14	2	0	0	0	0.87064	1	6936	6936		29.15	4.6455	1	84320	+		23913	21704;17327	16108	16118	27452	27452					0.05329221962892916
KSLSSKAS	8	Unmodified	_KSLSSKAS_					0	0	0		chr17:7439767-7441471|38|10.21|0.55|4.21|+|0|None,FGF11|1	chr17:7439767-7441471|38|10.21|0.55|4.21|+|0|None,FGF11|1	chr17:7439767-7441471|38|10.21|0.55|4.21|+|0|None,FGF11|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.23272705078125	2	404.232168	806.449782	-0.18723	-7.5686E-05	2.2381	0.00090472	2.0509	0.00082904	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.93259	1	8536	8536		51.193	13.381	1	4185000			23914	241	16109	16119	27453	27453					0.038815229720512434
KSLSSKAS	8	Unmodified	_KSLSSKAS_					0	0	0		chr17:7439767-7441471|38|10.21|0.55|4.21|+|0|None,FGF11|1	chr17:7439767-7441471|38|10.21|0.55|4.21|+|0|None,FGF11|1	chr17:7439767-7441471|38|10.21|0.55|4.21|+|0|None,FGF11|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.2327880859375	2	404.232168	806.449782	0.76489	0.0003092	1.2437	0.00050276	2.0086	0.00081195	404.2325671203917	85.114	3.6255	85.042	83.452	87.078	-0.07196					165	83	2	0	0	0	0.91982	1	8704	8704		45.972	8.9438	1	4970800			23915	241	16109	16119	27454	27454					0.038815229720512434
KSLVGELVSVF	11	Unmodified	_KSLVGELVSVF_					0	0	0			REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3433837890625	2	589.344989	1176.67542	-0.6745	-0.00039751	-2.9294	-0.0017264	-3.6039	-0.002124	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.7342	1	10025	10025		25.574	1.0549	1	16185000	+		23916	16827	16110	16120	27455	27455					0.09415427371436635
KSLVKGGLCRR	11	Unmodified	_KSLVKGGLCRR_					0	0	0		ENSG00000168906|ENST00000306434|MAT2A;nc|ENSG00000168906|P31153-2|MAT2A	ENSG00000168906|ENST00000306434|MAT2A	ENSG00000168906|ENST00000306434|MAT2A	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.249267578125	3	406.248408	1215.72339	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.36	1	114.33	113.83	114.83	-0.024452								0	0	0	0.56276	1	12669	12669		15.337	0.0043666	1				23917	6447	16111	16121	27456	27456					0.1241622281047512
KSLVKGSD	8	Unmodified	_KSLVKGSD_					0	0	0			REV__ENSG00000110243|ENST00000227665|APOA5	REV__ENSG00000110243|ENST00000227665|APOA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2395935058594	2	417.239993	832.465432	1.1488	0.00047933	-3.1805	-0.001327	-2.0317	-0.00084772	417.2384906610176	88.485	2.0585	88.411	87.855	89.913	-0.074005					110	48	3	0	0	0	0.88601	1	9187	9187		34.173	0	1	1559000	+		23918	17804	16112	16122	27457	27457					0.04249809489101608
KSMFGKIIVTK	11	Unmodified	_KSMFGKIIVTK_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.37939453125	2	626.378309	1250.74206	2.9096	0.0018225	-0.78641	-0.00049259	2.1232	0.0013299	626.377711482176	105.86	2.6957	105.82	104.89	107.59	-0.03714					304	63	6	0	0	0	0.6493	1	11842	11842		38.754	4.832	1	48616000	+		23919	16310	16113	16123	27458	27458					0.1267233966166259
KSNGLITT	8	Unmodified	_KSNGLITT_					0	0	0			REV__nc|ENSG00000107938|Q3B7T1-5|EDRF1	REV__nc|ENSG00000107938|Q3B7T1-5|EDRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.23956298828125	2	417.239993	832.465432	-1.05	-0.00043811	-0.95536	-0.00039861	-2.0054	-0.00083672	417.2394458180228	88.189	1.3218	88.652	88.27	89.592	0.46312					60	32	3	0	0	0	0.81897	1	10424	10424		20.947	0	1	1050800	+		23920	17683	16114	16124	27459	27459					0.04249809489078871
KSNLLTKFTL	10	Unmodified	_KSNLLTKFTL_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8594970703125	2	582.852981	1163.69141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.08	1	118.06	117.56	118.56	-0.024208								0	0	0	0.45132	1	13076	13076		25.574	1.0549	1		+		23921	29959	16115	16125	27460	27460					0.1161113360831223
KSNLSKKK	8	Unmodified	_KSNLSKKK_					0	0	0		L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|90|3|sense	L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|90|3|sense	L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|90|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7975158691406	2	466.798009	931.581465	0.35994	0.00016802	-1.4055	-0.00065611	-1.0456	-0.00048809	466.79729216650486	19.702	2.2945	19.233	18.459	20.753	-0.46967					107	51	4	0	0	0	0.8347	1	595	595		23.042	1.0826	1	2065900			23922	14564	16116	16126	27461	27461					0.11293753059794653
KSNPGWENL	9	Unmodified	_KSNPGWENL_					0	0	0		ENSG00000039650|ENST00000322344|PNKP;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF	ENSG00000039650|ENST00000322344|PNKP	ENSG00000039650|ENST00000322344|PNKP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.736328125	2	522.759081	1043.50361	0.21149	0.00011056	2.3525	0.0012298	2.564	0.0013404	522.7601986712455	38.278	0.51554	38.619	38.341	38.856	0.34187					20	12	2	0	0	0	0.20789	1	3142	3142		23.523	0	1	197440			23923	926	16117	16127	27462	27462					-0.01640304596230635
KSNPNPADTLL	11	Unmodified	_KSNPNPADTLL_					0	0	0			REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	585.3078002929688	2	585.311677	1168.6088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.703	1	57.686	57.186	58.186	-0.01643								0	0	0	0.56276	1	4891	4891		44.377	1.5129	1		+		23924	21829	16118	16128	27463	27463					0.031241918095247456
KSPALTKKKQH	11	Unmodified	_KSPALTKKKQH_					0	0	0		ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;ENST00000367112.1_2_6:158500311-158517393:+|nuORF;nc|ENSG00000078269|O15056-3|SYNJ2;chr6:158093104-158093888|18|12.06|0.72|4.06|+|ENST00000640338|SYNJ2,SYNJ2	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.592529296875	3	422.594461	1264.76155	0.065829	2.7819E-05	-4.3534	-0.0018397	-4.2876	-0.0018119	422.5925689714444	52.422	1.6133	53.09	52.676	54.289	0.6673					95	38	3	0	0	0	0.67762	1	5272	5272		35.178	8.4285	1	460860			23925	1394;471	16119	16129	27464	27464					0.13976431996775318
KSPAPEEKGR	10	Unmodified	_KSPAPEEKGR_					0	0	0		ENSG00000171219|ENST00000342711|CDC42BPG	ENSG00000171219|ENST00000342711|CDC42BPG	ENSG00000171219|ENST00000342711|CDC42BPG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.7991333007812	2	549.798737	1097.58292	0.55035	0.00030258	-0.48849	-0.00026857	0.061865	3.4014E-05	549.7983092114905	32.239	0.68692	32.347	32.059	32.746	0.10707					27	15	3	0	0	0	0.57924	1	2267	2267		51.193	5.2204	1	289890			23926	6647	16120	16130	27465	27465					0.03803342357900874
KSPKTKGKTG	10	Unmodified	_KSPKTKGKTG_					0	0	0			REV__ENSG00000126461|ENST00000360565|SCAF1	REV__ENSG00000126461|ENST00000360565|SCAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3138427734375	2	516.314023	1030.61349	3.0983	0.0015997	-2.8984	-0.0014965	0.19991	0.00010322	516.3124899317548	102.33	1.1091	102.29	101.92	103.03	-0.047005					68	26	3	0	0	0	0.86471	1	11202	11202		30.318	4.7437	1	756390	+		23927	18701	16121	16131	27466	27466					0.0994112074295117
KSPKTKGKTG	10	Unmodified	_KSPKTKGKTG_					0	0	0			REV__ENSG00000126461|ENST00000360565|SCAF1	REV__ENSG00000126461|ENST00000360565|SCAF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3138427734375	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.85981	1	12117	12117		35.152	0	1	4038100	+		23928	18701	16121	16131	27467	27467					0.0994112074295117
KSPLLHARIQG	11	Unmodified	_KSPLLHARIQG_					0	0	0			REV__ENSG00000188305|ENST00000342063|PEAK3	REV__ENSG00000188305|ENST00000342063|PEAK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	407.5809631347656	3	407.247173	1218.71969	0.45926	0.00018703	-2.3511	-0.00095746	-1.8918	-0.00077043	407.24619376091545	16.006	0.28492	15.982	15.827	16.111	-0.024034					19	11	2	0	0	0	0.72892	1	107	107		26.75	0	1	56033	+		23929	22992	16122	16132	27468	27468					0.11907876308259802
KSPPILSPPLA	11	Unmodified	_KSPPILSPPLA_					0	0	0			REV__nc|ENSG00000127527|Q9UBC2-3|EPS15L1	REV__nc|ENSG00000127527|Q9UBC2-3|EPS15L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3406982421875	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7144	3	12902	12334;12449;12902		29.17	5.6474	1	4071000	+		23930	18738	16123	16133	27469;27470;27471	27471					0.1153574857962667
KSPPYMMPQ	9	Unmodified	_KSPPYMMPQ_					0	0	0		ENST00000352410.8_1_15:75190564-75190915:+|nuORF	ENST00000352410.8_1_15:75190564-75190915:+|nuORF	ENST00000352410.8_1_15:75190564-75190915:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.2845458984375	2	539.756638	1077.49872	-0.16083	-8.6809E-05	-0.24836	-0.00013405	-0.40919	-0.00022086	539.7563461677306	68.998	0.33961	69.382	69.224	69.563	0.38416					9	7	2	0	0	0	0.20789	1	7608	7608		26.693	0	1	148230			23931	10325	16124	16134	27472	27472					-0.0369264805488001
KSPPYMMPQ	9	Unmodified	_KSPPYMMPQ_					0	0	0		ENST00000352410.8_1_15:75190564-75190915:+|nuORF	ENST00000352410.8_1_15:75190564-75190915:+|nuORF	ENST00000352410.8_1_15:75190564-75190915:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	539.756638	1077.49872	-0.63457	-0.00034251	-1.453	-0.00078427	-2.0876	-0.0011268	540.2570599613975	68.64	0.17061	69.187	69.112	69.282	0.54693	-0.097591	-0.00090772	NaN	47.657	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84283			23932	10325	16124	16134							-0.0369264805488001
KSPRGKIVA	9	Unmodified	_KSPRGKIVA_					0	0	0			REV__ENSG00000106609|ENST00000341567|TMEM248	REV__ENSG00000106609|ENST00000341567|TMEM248	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.3056945800781	2	478.306001	954.597449	-0.61994	-0.00029652	0.11621	5.5584E-05	-0.50373	-0.00024094	478.3058961311463	17.626	0.43239	17.015	16.844	17.276	-0.6107					25	11	3	0	0	0	0.38563	1	280	280		58.782	8.7574	1	400360	+		23933	17619	16125	16135	27473	27473					0.11833459296701676
KSPRYDDPY	9	Unmodified	_KSPRYDDPY_					0	0	0			REV__ENSG00000095587|ENST00000357947|TLL2	REV__ENSG00000095587|ENST00000357947|TLL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.2750244140625	2	570.769645	1139.52474	-1.1215	-0.00064012	3.6842	0.0021028	2.5627	0.0014627	571.2731771324486	59.343	1.7285	59.329	58.466	60.195	-0.013733					93	51	2	0	0	0	0.73802	1	5400	5400		37.812	4.9991	1	112100	+		23934	17064	16126	16136	27474	27474					-0.03944339287386356
KSPSAFHK	8	Unmodified	_KSPSAFHK_					0	0	0			REV__ENSG00000122034|ENST00000381140|GTF3A	REV__ENSG00000122034|ENST00000381140|GTF3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.2489318847656	2	451.248152	900.481751	0.4571	0.00020627	0.75976	0.00034284	1.2169	0.00054911	451.2483516516998	67.877	1.2398	68.005	67.282	68.522	0.12748					79	46	2	0	0	0	0.88601	1	6045	6045		34.173	5.023	1	170990	+		23935	18479	16127	16137	27475	27475					0.02752935445857929
KSPTKFHG	8	Unmodified	_KSPTKFHG_					0	0	0			REV__ENST00000510927.5_1_4:106967729-107168455:-|nuORF	REV__ENST00000510927.5_1_4:106967729-107168455:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2477722167969	2	451.248152	900.481751	-0.10221	-4.6121E-05	1.3002	0.00058673	1.198	0.00054061	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.89494	1	6404	6404		37.159	1.5408	1	178200	+		23936	19939	16128	16138	27476	27476					0.02752935445857929
KSPTPAIV	8	Unmodified	_KSPTPAIV_					0	0	0		ENST00000422321.5_1_10:22856588-22898637:-|nuORF	ENST00000422321.5_1_10:22856588-22898637:-|nuORF	ENST00000422321.5_1_10:22856588-22898637:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.74951171875	2	406.747453	811.480354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.47	1	116.46	115.96	116.96	-0.014999								0	0	0	0.30004	1	13973	13973		21.702	1.2205	1				23937	11479	16129	16139	27477	27477					0.06707301357073447
KSPVPIVP	8	Unmodified	_KSPVPIVP_					0	0	0			REV__ENSG00000215474|ENST00000425639|SKOR2	REV__ENSG00000215474|ENST00000425639|SKOR2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.76446533203125	2	418.765646	835.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.265	1	33.435	32.935	33.935	0.16971								0	0	0	0.29755	1	2384	2384		24.203	1.1603	1		+		23938	23686	16130	16140	27478	27478					0.09240178253799058
KSPVPIVP	8	Unmodified	_KSPVPIVP_					0	0	0			REV__ENSG00000215474|ENST00000425639|SKOR2	REV__ENSG00000215474|ENST00000425639|SKOR2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.7646484375	2	418.765646	835.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.178	1	33.39	32.89	33.89	0.21168								0	0	0	0.29755	1	2390	2390		24.203	2.5004	1		+		23939	23686	16130	16140	27479	27479					0.09240178253799058
KSPWQRREERP	11	Unmodified	_KSPWQRREERP_					0	0	0		ENSG00000161682|ENST00000293443|FAM171A2	ENSG00000161682|ENST00000293443|FAM171A2	ENSG00000161682|ENST00000293443|FAM171A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.262451171875	3	490.263774	1467.76949	-0.4909	-0.00024067	2.3744	0.0011641	1.8835	0.00092341	490.2647507238825	67.55	0.6627	67.514	67.155	67.817	-0.035698					51	27	3	0	0	0	0.78607	1	6475	6475		14.243	0.15724	1	98925			23940	5651	16131	16141	27480	27480					0.0543195924626616
KSQKYNCLV	9	Carbamidomethyl (C)	_KSQKYNC(Carbamidomethyl (C))LV_	KSQKYNC(1)LV		KSQKYNC(48)LV		0	1	0		ENST00000323387.5_10:47380981-47400428:+|nuORF;ENST00000419427.1_10:49088147-49088795:+|nuORF;nc|ENSG00000122376|Q86V20|SHLD2;ENSG00000122376|ENST00000298786|SHLD2	ENST00000323387.5_10:47380981-47400428:+|nuORF	ENST00000323387.5_10:47380981-47400428:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.2951049804688	2	570.297516	1138.58048	-0.19522	-0.00011133	-3.3878	-0.001932	-3.583	-0.0020434	570.2954447589152	61.934	0.66319	61.964	61.679	62.342	0.029575					66	27	3	0	0	0	0.58668	1	5803	5803		47.657	6.2307	1	775280			23941	3220	16132	16142	27481	27481	38				0.016731706285554537
KSQLFVRP	8	Unmodified	_KSQLFVRP_					0	0	0			REV__ENSG00000206562|ENST00000383790|METTL6	REV__ENSG00000206562|ENST00000383790|METTL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79095458984375	2	487.792727	973.5709	-1.3135	-0.00064074	-3.0168	-0.0014716	-4.3304	-0.0021123	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.86677	1	8695	8695		27.882	1.0861	1	2239000	+		23942	23595	16133	16143	27482	27482					0.08305770405377189
KSQRGRRRLAR	11	Unmodified	_KSQRGRRRLAR_					0	0	0			REV__ENST00000393313.5_1_7:127032353-127032743:-|nuORF	REV__ENST00000393313.5_1_7:127032353-127032743:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.5778503417969	3	461.955387	1382.84433	0.0038426	1.7751E-06	1.4952	0.00069073	1.4991	0.00069251	461.9559606692973	30.255	0.48075	30.166	29.917	30.398	-0.089546					23	10	3	0	0	0	0.18131	1	1991	1991		5.4129	3.7777	1	263420	+		23943	26053	16134	16144	27483	27483					0.16822186568174402
KSQRKRKSVTF	11	Unmodified	_KSQRKRKSVTF_					0	0	0		ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.60882568359375	3	455.608882	1363.80482	-0.55128	-0.00025117	-0.41199	-0.00018771	-0.96328	-0.00043888	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.71394	1	7261	7261		29.245	1.6011	1	1732400			23944	10162	16135	16145	27484	27484					0.13746621774066625
KSQRKRKSVTF	11	Unmodified	_KSQRKRKSVTF_					0	0	0		ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6087951660156	3	455.608882	1363.80482	-0.88204	-0.00040187	-0.15867	-7.2292E-05	-1.0407	-0.00047416	455.6087169982617	69.938	2.9068	70.322	69.842	72.749	0.38416					146	73	3	0	0	0	0.46531	2	7844	7844;7863		54.343	14.47	1	869170			23945	10162	16135	16145	27485;27486	27485					0.13746621774066625
KSQRKRKSVTF	11	Unmodified	_KSQRKRKSVTF_					0	0	0		ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.60870361328125	3	455.608882	1363.80482	-0.22489	-0.00010246	-0.74709	-0.00034038	-0.97198	-0.00044284	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.67568	1	7443	7443		35.496	0.31743	1	1863900			23946	10162	16135	16145	27487	27487					0.13746621774066625
KSQRKRKSVTF	11	Unmodified	_KSQRKRKSVTF_					0	0	0		ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6086730957031	3	455.608882	1363.80482	-0.22342	-0.00010179	-0.82695	-0.00037677	-1.0504	-0.00047856	455.6084251791674	69.831	3.554	70.377	70.039	73.593	0.54693					191	88	3	0	0	0	0.57028	3	7805	7805;7831;7860		46.955	1.0469	1	1270100			23947	10162	16135	16145	27488;27489;27490	27488					0.13746621774066625
KSRGAVVVN	9	Unmodified	_KSRGAVVVN_					0	0	0			REV__nc|ENSG00000163738|Q9H903-3|MTHFD2L	REV__nc|ENSG00000163738|Q9H903-3|MTHFD2L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2799377441406	2	465.279983	928.545414	-1.1036	-0.00051349	1.1861	0.00055185	0.082455	3.8365E-05	465.28037254514356	89.207	2.109	89.207	88.71	90.819	0					110	48	4	0	0	0	0.76764	1	8636	8636		34.173	6.2903	1	1091500	+		23948	16511	16136	16146	27491	27491					0.07828295882939074
KSRGRDIV	8	Unmodified	_KSRGRDIV_					0	0	0		ENSG00000138892|ENST00000433387|TTLL8;nc|ENSG00000138892|A6PVC2|TTLL8	ENSG00000138892|ENST00000433387|TTLL8	ENSG00000138892|ENST00000433387|TTLL8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7774963378906	2	465.777608	929.540663	-0.1189	-5.538E-05	0.19446	9.0574E-05	0.07556	3.5194E-05	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.87071	1	7803	7803		29.17	0.020503	1	345200			23949	4342	16137	16147	27492	27492					0.07307411740180214
KSRGVGLQLNK	11	Unmodified	_KSRGVGLQLNK_					0	0	0			REV__ENSG00000175471|ENST00000515393|MCTP1	REV__ENSG00000175471|ENST00000515393|MCTP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5805358886719	3	400.578811	1198.7146	3.1799	0.0012738	1.0986	0.00044006	4.2785	0.0017139	400.5790522363323	116.4	0.81905	116.42	115.99	116.81	0.026466					36	27	2	0	0	0	0.71394	1	12753	12753		29.245	6.6653	1	41735	+		23950	22069	16138	16148	27493	27493					0.12319572445653648
KSRGVGLQLNK	11	Unmodified	_KSRGVGLQLNK_					0	0	0			REV__ENSG00000175471|ENST00000515393|MCTP1	REV__ENSG00000175471|ENST00000515393|MCTP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	400.578811	1198.7146	3.4046	0.0013638	-0.23448	-9.3927E-05	3.1701	0.0012699	400.9128003851507	116.77	0.060326	116.76	116.72	116.78	-0.014999	0.16803	-0.0013715	NaN	29.245	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18482	+		23951	22069	16138	16148							0.12319572445653648
KSRHRRKKRRK	11	Unmodified	_KSRHRRKKRRK_					0	0	0			REV__nc|ENSG00000067066|P23497-3|SP100	REV__nc|ENSG00000067066|P23497-3|SP100	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7869873046875	3	512.669581	1534.98691	-0.46528	-0.00023854	-2.7797	-0.0014251	-3.245	-0.0016636	513.0025066858366	28.491	0.69475	28.394	27.974	28.669	-0.096947					25	16	2	0	0	0	0.18258	1	1698	1698		8.7993	7.3806	1	53009	+		23952	16535	16139	16149	27494	27494					0.2408181903017521
KSRILFHPRSL	11	Unmodified	_KSRILFHPRSL_					0	0	0		ENST00000431657.5_1_3:44409097-44442080:+|nuORF;nc|ENSG00000179152|Q8N3R3-4|TCAIM;ENSG00000179152|ENST00000342649|TCAIM	ENST00000431657.5_1_3:44409097-44442080:+|nuORF	ENST00000431657.5_1_3:44409097-44442080:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.943115234375	3	451.941973	1352.80409	0.2172	9.8162E-05	2.4446	0.0011048	2.6618	0.001203	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.76668	1	4633	4633		18.332	1.8018	1	771970			23953	7250	16140	16150	27495	27495					0.14179827125030897
KSRIPPLGKKQ	11	Unmodified	_KSRIPPLGKKQ_					0	0	0			REV__ENSG00000213079|ENST00000367178|SCAF8	REV__ENSG00000213079|ENST00000367178|SCAF8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.9223937988281	3	417.934706	1250.78229	0.73401	0.00030677	-0.47198	-0.00019726	0.26203	0.00010951	417.93439589007966	105.71	0.45782	105.82	105.58	106.04	0.10766					24	11	3	0	0	0	0.1731	1	11266	11266		31.068	13.235	1	210370	+		23954	23608	16141	16151	27496	27496					0.16693022376466615
KSRLKVLTE	9	Unmodified	_KSRLKVLTE_					0	0	0		ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-5|SYNE1;nc|ENSG00000131018|Q8NF91-6|SYNE1;nc|ENSG00000131018|Q8NF91-10|SYNE1;ENST00000461872.6_1_6:152697909-152949466:-|nuORF	ENSG00000131018|ENST00000367255|SYNE1	ENSG00000131018|ENST00000367255|SYNE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3264770507812	2	537.337498	1072.66044	-0.13059	-7.0173E-05	-3.297	-0.0017716	-3.4276	-0.0018418	537.8353820901834	106.02	1.2076	105.99	105.1	106.31	-0.025146					50	28	2	0	0	0	0.20789	1	11520	11520		14.137	0	1	78133			23955	3707	16142	16152	27497	27497					0.12701980294104942
KSRLLASLSG	10	Unmodified	_KSRLLASLSG_					0	0	0			REV__ENSG00000180815|ENST00000338883|MAP3K15;REV__ENSG00000197442|ENST00000359015|MAP3K5	REV__ENSG00000197442|ENST00000359015|MAP3K5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.314453125	2	516.314023	1030.61349	0.86902	0.00044869	-0.81375	-0.00042015	0.055274	2.8539E-05	516.3134632199627	112.89	2.8792	112.91	112.73	115.61	0.028854					110	77	2	0	0	0	0.86587	1	12640	12640		29.17	0.91578	1	336880	+		23956	23231;22418	16143	16153	27498	27498					0.09941120742928433
KSRLLLGLG	9	Unmodified	_KSRLLLGLG_					0	0	0			REV__ENSG00000083720|ENST00000196371|OXCT1	REV__ENSG00000083720|ENST00000196371|OXCT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.8022155761719	2	478.816202	955.617851	-2.2189	-0.0010624	-0.057872	-2.771E-05	-2.2768	-0.0010901	478.8161026596872	40.19	0.6741	40.779	40.303	40.977	0.58915					26	16	2	0	0	0	0.20789	1	3419	3419		45.952	0	1	392440	+		23957	16859	16144	16154	27499	27499					0.13826629956520264
KSRMTGPPTT	10	Unmodified	_KSRMTGPPTT_					0	0	0			REV__ENST00000400768.2_1_2:242674794-242674905:-|nuORF	REV__ENST00000400768.2_1_2:242674794-242674905:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3267822265625	2	538.281866	1074.54918	1.2457	0.00067054	4.2195	0.0022713	5.4652	0.0029418	538.2842818131546	100.87	0.62373	100.92	100.47	101.1	0.046356					27	14	3	0	0	0	0.37624	1	10846	10846		44.377	15.228	1	337530	+		23958	26252	16145	16155	27500	27500					0.014885975944935126
KSRNWRKKKVE	11	Unmodified	_KSRNWRKKKVE_					0	0	0			REV__ENST00000457507.1_1_1:99473841-99474009:+|nuORF	REV__ENST00000457507.1_1_1:99473841-99474009:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.95904541015625	3	486.959915	1457.85791	-0.68917	-0.0003356	-1.13	-0.00055025	-1.8191	-0.00088584	486.95912437629556	102.63	1.2663	102.82	102.18	103.44	0.19484					77	31	5	0	0	0	0.78351	1	10804	10804		14.779	1.2709	1	378820	+		23959	26970	16146	16156	27501	27501					0.1472999955672094
KSRPWKLP	8	Unmodified	_KSRPWKLP_					0	0	0		ENST00000585057.5_3_3:127783873-127787552:-|nuORF	ENST00000585057.5_3_3:127783873-127787552:-|nuORF	ENST00000585057.5_3_3:127783873-127787552:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.30908203125	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.176	1	67.561	67.061	68.061	0.38515								0	0	0	0.30305	1	7349	7349		42.396	1.618	1				23960	14142	16147	16157	27502	27502					0.09765763159305152
KSRRSRGH	8	Unmodified	_KSRRSRGH_					0	0	0		ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-3|IQCH;ENST00000514049.5_1_15:67636411-67663825:+|nuORF	ENSG00000103599|ENST00000335894|IQCH	ENSG00000103599|ENST00000335894|IQCH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2873229980469	2	492.283923	982.553293	1.6804	0.00082722	4.489	0.0022099	6.1694	0.0030371	492.28670249740594	110.53	1.1679	110.59	110.07	111.24	0.054062					79	40	3	0	0	0	0.90523	1	13380	13380		40.778	7.9657	1	260830			23961	2094	16148	16158	27503	27503					0.06131867923079426
KSRSRRSKRG	10	Unmodified	_KSRSRRSKRG_					0	0	0			REV__ENST00000392363.2_1_2:189092214-189092451:+|nuORF	REV__ENST00000392363.2_1_2:189092214-189092451:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.5835266113281	3	406.581438	1216.72248	5.5973	0.0022758	0.88035	0.00035793	6.4776	0.0026337	406.5816361168402	111.84	0.29085	111.87	111.73	112.02	0.032707					26	11	3	0	0	0	0.85654	1	13561	13561		21.78	1.75	1	1379300	+		23962	26018	16149	16159	27504	27504					0.12279144485796678
KSRTKKQKIY	10	Unmodified	_KSRTKKQKIY_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3955078125	2	640.395879	1278.7772	-0.69345	-0.00044408	-3.5831	-0.0022946	-4.2765	-0.0027387	640.3933606010097	53.872	1.0072	53.872	53.507	54.514	0					69	30	3	0	0	0	0.86218	1	4523	4523		32.812	7.2384	1	206080	+		23963	18431	16150	16160	27505	27505					0.1489671851386447
KSRYILILVC	10	Unmodified	_KSRYILILVC_					0	0	0			REV__ENSG00000166450|ENST00000389286|PRTG	REV__ENSG00000166450|ENST00000389286|PRTG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.368896484375	2	604.365201	1206.71585	-0.16822	-0.00010167	2.2665	0.0013698	2.0983	0.0012681	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.86272	1	10743	10743		24.519	3.5723	1	47715000	+		23964	21295	16151	16161	27506	27506					0.12076070490206803
KSSARGAM	8	Unmodified	_KSSARGAM_					0	0	0			REV__nc|ENSG00000177030|O75398-4|DEAF1	REV__nc|ENSG00000177030|O75398-4|DEAF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2327880859375	2	404.210712	806.406871	2.868	0.0011593	4.0517	0.0016377	6.9197	0.002797	404.2133143495712	84.885	0.2174	84.944	84.849	85.067	0.05925					6	4	2	0	0	0	0.4196	1	8591	8591		37.159	5.2042	1	20293	+		23965	22172	16152	16162	27507	27507					-0.004075703570265432
KSSCKKYSR	9	Unmodified	_KSSCKKYSR_					0	0	0		ENSG00000164023|ENST00000690982|SGMS2	ENSG00000164023|ENST00000690982|SGMS2	ENSG00000164023|ENST00000690982|SGMS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.494140625	2	543.789858	1085.56516	-2.5512	-0.0013873	-1.4964	-0.00081373	-4.0476	-0.002201	543.7887855891626	41.918	0.33941	42.332	42.011	42.351	0.4139					13	8	2	0	0	0	0.20789	1	3681	3681		64.207	2.0999	1	251960			23966	5902	16153	16163	27508	27508					0.0258030383138248
KSSCKKYSR	9	Unmodified	_KSSCKKYSR_					0	0	0		ENSG00000164023|ENST00000690982|SGMS2	ENSG00000164023|ENST00000690982|SGMS2	ENSG00000164023|ENST00000690982|SGMS2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	543.789858	1085.56516	-1.9204	-0.0010443	-1.303	-0.00070856	-3.2234	-0.0017528	543.7888329492689	41.637	0.25676	42.271	42.135	42.392	0.6339	-0.030538	0.00013584	NaN	64.207	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	253950			23967	5902	16153	16163							0.0258030383138248
KSSGDKIL	8	Unmodified	_KSSGDKIL_					0	0	0			REV__chr10:92637309-92637391|57|13.98|0.46|4.91|+|ENST00000677720|KIF11,KIF11	REV__chr10:92637309-92637391|57|13.98|0.46|4.91|+|ENST00000677720|KIF11,KIF11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.25048828125	2	424.247818	846.481082	1.3768	0.0005841	3.5409	0.0015022	4.9177	0.0020863	424.2492891038276	97.642	1.717	98.033	97.562	99.279	0.39065					73	41	3	0	0	0	0.87259	1	11787	11787		58.782	1.3293	1	964290	+		23968	15483	16154	16164	27509	27509					0.051700960061339174
KSSKKKKL	8	Unmodified	_KSSKKKKL_					0	0	0			REV__nc|ENSG858|P60608|ERVFC1-1	REV__nc|ENSG858|P60608|ERVFC1-1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.8215026855469	2	473.824027	945.633501	-1.811	-0.00085809	-2.8905	-0.0013696	-4.7015	-0.0022277	473.82255707723726	37.572	1.2199	37.572	37.042	38.262	0					48	28	3	0	0	0	0.86906	1	2262	2262		8.2313	0	1	126770	+		23969	30319	16155	16165	27510	27510					0.1585091647355057
KSSKNPKK	8	Unmodified	_KSSKNPKK_					0	0	0		ENSG00000124610|ENST00000244573|H1-1	ENSG00000124610|ENST00000244573|H1-1	ENSG00000124610|ENST00000244573|H1-1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.7817687988281	2	458.782359	915.550165	0.041914	1.923E-05	-0.38631	-0.00017723	-0.3444	-0.000158	458.7821952343748	20.778	1.5787	20.854	20.502	22.08	0.075848					186	78	4	0	0	0	0.83456	1	571	571		60.972	2.19	1	8263600			23970	3350	16156	16166	27511	27511					0.08901180025702615
KSSLELLATW	10	Unmodified	_KSSLELLATW_					0	0	0			REV__ENST00000447577.5_1_1:93730252-93805219:-|nuORF	REV__ENST00000447577.5_1_1:93730252-93805219:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3176879882812	2	574.321514	1146.62847	-1.3729	-0.0007885	-2.1573	-0.001239	-3.5302	-0.0020275	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.86587	1	9810	9810		29.17	0.91578	1	1586900	+		23971	26821	16157	16167	27512	27512					0.061025678202895506
KSSLLLVMP	9	Unmodified	_KSSLLLVMP_					0	0	0		ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.3013000488281	2	494.298996	986.583439	-0.82421	-0.00040741	4.4506	0.0021999	3.6264	0.0017925	494.3011394049625	97.613	4.008	97.613	96.986	100.99	0					359	95	6	0	0	0	0.78536	1	10184	10184		29.15	2.3535	1	29815000			23972	7925	16158	16168	27513	27513					0.08961045753392227
KSSLSFLVPSL	11	Unmodified	_KSSLSFLVPSL_					0	0	0		nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	nc|ENSG00000113569|O75694-2|NUP155	nc|ENSG00000113569|O75694-2|NUP155	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.343017578125	2	589.344989	1176.67542	-0.36759	-0.00021664	-3.0824	-0.0018166	-3.45	-0.0020332	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.68532	1	9300	9300		33.922	3.6039	1	11103000			23973	2728	16159	16169	27514	27514					0.09415427371436635
KSSLSFLVPSL	11	Unmodified	_KSSLSFLVPSL_					0	0	0		nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	nc|ENSG00000113569|O75694-2|NUP155	nc|ENSG00000113569|O75694-2|NUP155	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3429565429688	2	589.344989	1176.67542	-0.6745	-0.00039751	-2.9294	-0.0017264	-3.6039	-0.002124	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.68532	3	9940	9891;9940;10062		33.922	5.8401	1	16185000			23974	2728	16159	16169	27515;27516;27517	27516					0.09415427371436635
KSSPKVKT	8	Unmodified	_KSSPKVKT_					0	0	0			REV__nc|ENSG00000105227|Q9BXM0-3|PRX	REV__nc|ENSG00000105227|Q9BXM0-3|PRX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7713623046875	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.80959	1	2188	2188		15.642	0	1	1151500	+		23975	17516	16160	16170	27518	27518					0.08654375277126292
KSSPKVKT	8	Unmodified	_KSSPKVKT_					0	0	0			REV__nc|ENSG00000105227|Q9BXM0-3|PRX	REV__nc|ENSG00000105227|Q9BXM0-3|PRX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7712707519531	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.7961	1	2198	2198		17.365	0.89182	1	1041500	+		23976	17516	16160	16170	27519	27519					0.08654375277126292
KSSPKVKT	8	Unmodified	_KSSPKVKT_					0	0	0			REV__nc|ENSG00000105227|Q9BXM0-3|PRX	REV__nc|ENSG00000105227|Q9BXM0-3|PRX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77130126953125	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.83058	1	2983	2983		12.959	1.4482	1	13476000	+		23977	17516	16160	16170	27520	27520					0.08654375277126292
KSSPKVKT	8	Unmodified	_KSSPKVKT_					0	0	0			REV__nc|ENSG00000105227|Q9BXM0-3|PRX	REV__nc|ENSG00000105227|Q9BXM0-3|PRX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7690734863281	2	437.77146	873.528367	-1.1766	-0.00051507	-0.34958	-0.00015304	-1.5261	-0.0006681	437.77143489998485	40.358	2.279	40.947	39.956	42.235	0.58915					112	60	4	0	0	0	0.80959	1	3430	3430		15.642	0	1	5900400	+		23978	17516	16160	16170	27521	27521					0.08654375277126292
KSSRKNVF	8	Unmodified	_KSSRKNVF_					0	0	0		ENST00000552641.5_1_2:143913059-144194625:+|nuORF;ENSG00000075884|ENST00000295095|ARHGAP15	ENST00000552641.5_1_2:143913059-144194625:+|nuORF	ENST00000552641.5_1_2:143913059-144194625:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.27886962890625	2	483.279983	964.545414	1.5983	0.00077242	-3.3744	-0.0016308	-1.7761	-0.00085837	483.2783922917404	94.904	1.8969	95.336	94.89	96.787	0.4324					93	45	3	0	0	0	0.86288	1	11330	11330		26.796	1.3459	1	659840			23979	1345	16161	16171	27522	27522					0.06172295882936396
KSSRKVAEP	9	Unmodified	_KSSRKVAEP_					0	0	0		ENSG00000084774|ENST00000264705|CAD	ENSG00000084774|ENST00000264705|CAD	ENSG00000084774|ENST00000264705|CAD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2904357910156	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.77696	1	8872	8872		31.53	1.0262	1	9883700			23980	1526	16162	16172	27523	27523					0.06628261191792717
KSSSLSRKPT	10	Unmodified	_KSSSLSRKPT_					0	0	0			REV__ENSG00000005156|ENST00000378526|LIG3	REV__ENSG00000005156|ENST00000378526|LIG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.8165283203125	2	545.814387	1089.61422	0.1312	7.1612E-05	3.5714	0.0019493	3.7026	0.002021	545.8161823406347	32.948	0.45638	32.946	32.713	33.17	-0.0016365					18	11	2	0	0	0	0.82886	1	1898	1898		37.812	2.1932	1	36714	+		23981	16076	16163	16173	27524	27524					0.07299915391990908
KSSSLSRKPT	10	Unmodified	_KSSSLSRKPT_					0	0	0			REV__ENSG00000005156|ENST00000378526|LIG3	REV__ENSG00000005156|ENST00000378526|LIG3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	545.814387	1089.61422	-0.18005	-9.8276E-05	3.7146	0.0020275	3.5345	0.0019292	545.8163319449433	33.038	0.56329	33.041	32.654	33.217	0.0030785	0.016541	0.00038335	NaN	37.812	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32155	+		23982	16076	16163	16173							0.07299915391990908
KSSSLSRKPT	10	Unmodified	_KSSSLSRKPT_					0	0	0			REV__ENSG00000005156|ENST00000378526|LIG3	REV__ENSG00000005156|ENST00000378526|LIG3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	545.814387	1089.61422	0.41194	0.00022484	2.8197	0.001539	3.2316	0.0017639	545.8158284271581	33.14	0.57106	33.086	32.853	33.424	-0.054337	0.061434	-0.00059357	NaN	37.812	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44507	+		23983	16076	16163	16173							0.07299915391990908
KSSSLSRKPT	10	Unmodified	_KSSSLSRKPT_					0	0	0			REV__ENSG00000005156|ENST00000378526|LIG3	REV__ENSG00000005156|ENST00000378526|LIG3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	545.814387	1089.61422	0.1312	7.1612E-05	3.5714	0.0019493	3.7026	0.002021	545.8161823406347	32.948	0.45638	32.946	32.713	33.17	-0.0016365	-0.077975	0.00022707	NaN	37.812	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36714	+		23984	16076	16163	16173							0.07299915391990908
KSSSVYEH	8	Unmodified	_KSSSVYEH_					0	0	0			REV__nc|ENSG00000068885|Q9P2H3-2|IFT80	REV__nc|ENSG00000068885|Q9P2H3-2|IFT80	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232666015625	2	468.724707	935.43486	-0.94379	-0.00044238	-1.8848	-0.00088346	-2.8286	-0.0013258	468.7236903113572	85.734	0.90586	86.181	85.782	86.688	0.44736					54	21	3	0	0	0	0.91472	1	10057	10057		44.117	8.4985	1	829770	+		23985	16569	16164	16174	27525	27525					-0.03543968895951366
KSSVLKVN	8	Unmodified	_KSSVLKVN_					0	0	0			REV__ENST00000579081.5_2_17:29626598-29701170:+|nuORF	REV__ENST00000579081.5_2_17:29626598-29701170:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7707214355469	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.8267	1	2282	2282		13.454	1.2472	1	1151500	+		23986	23165	16165	16175	27526	27526					0.0865437527713766
KSTGKVNKIT	10	Unmodified	_KSTGKVNKIT_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L	ENSG00000204390|ENST00000375654|HSPA1L	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3268432617188	2	538.327131	1074.63971	1.246	0.00067076	-1.73	-0.00093129	-0.48397	-0.00026053	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.8651	1	11146	11146		25.574	2.5316	1	76567000			23987	8438	16166	16176	27527	27527					0.10537389914406958
KSTKVRKIQH	10	Unmodified	_KSTKVRKIQH_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|79|2|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|79|2|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|79|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.8802490234375	2	612.880396	1223.74624	0.28933	0.00017733	-1.62	-0.00099287	-1.3307	-0.00081554	612.8792234651027	104.57	3.8669	104.61	104	107.87	0.039864					305	91	6	0	0	0	0.86763	1	11521	11521		26.693	4.1133	1	50996000			23988	14656	16167	16177	27528	27528					0.1433156519960903
KSTKVRKIQH	10	Unmodified	_KSTKVRKIQH_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|79|2|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|79|2|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|79|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.8802490234375	2	612.880396	1223.74624	1.1743	0.00071971	-2.5584	-0.001568	-1.3841	-0.00084828	612.878611922605	104.31	3.5817	104.48	103.81	107.39	0.17096					311	89	7	0	0	0	0.80179	1	11185	11185		39.253	3.6345	1	83708000			23989	14656	16167	16177	27529	27529					0.1433156519960903
KSTLGKKKG	9	Unmodified	_KSTLGKKKG_					0	0	0		ENST00000488315.5_1_7:149565341-149565602:-|nuORF	ENST00000488315.5_1_7:149565341-149565602:-|nuORF	ENST00000488315.5_1_7:149565341-149565602:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.80657958984375	2	473.805834	945.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.66	1	19.031	18.531	19.531	-0.6296								0	0	0	0.32022	1	550	550		23.523	0.48021	1				23990	12622	16168	16178	27530	27530					0.122140395768497
KSTRCKPQRR	10	Unmodified	_KSTRCKPQRR_					0	0	0			REV__ENST00000265620.11_2_20:57470717-57478626:+|nuORF	REV__ENST00000265620.11_2_20:57470717-57478626:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.573486328125	3	420.575295	1258.70406	-0.24128	-0.00010148	0.38403	0.00016151	0.14275	6.0036E-05	420.5753949559437	45.518	0.89418	45.99	45.563	46.457	0.47139					60	21	4	0	0	0	0.86446	1	4214	4214		30.569	4.5055	1	5843600	+		23991	24495	16169	16179	27531	27531					0.08505266519568977
KSTSFRPG	8	Unmodified	_KSTSFRPG_					0	0	0		nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1;ENSG00000143379|ENST00000692827|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2375183105469	2	440.237784	878.461016	-0.3905	-0.00017191	0.98502	0.00043364	0.59452	0.00026173	440.2380657993963	18.443	0.50097	18.366	18.148	18.649	-0.07671					22	12	3	0	0	0	0.90523	1	298	298		40.778	1.7567	1	83776			23992	4624	16170	16180	27532	27532					0.01692345066192047
KSTSFRPG	8	Unmodified	_KSTSFRPG_					0	0	0		nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1;ENSG00000143379|ENST00000692827|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	nc|ENSG00000143379|Q15047-3|SETDB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.23822021484375	2	440.237784	878.461016	1.6858	0.00074214	-0.78692	-0.00034643	0.89886	0.00039571	440.2372510646035	18.42	0.43113	18.341	18.138	18.57	-0.078941					21	16	2	0	0	0	0.92394	1	319	319		47.657	3.5405	1	91606			23993	4624	16170	16180	27533	27533					0.01692345066192047
KSTSLNFLS	9	Unmodified	_KSTSLNFLS_					0	0	0			REV__nc|ENSG00000165071|Q6P5X7-3|TMEM71	REV__nc|ENSG00000165071|Q6P5X7-3|TMEM71	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.77142333984375	2	498.771657	995.528761	1.4022	0.0006994	-2.2226	-0.0011086	-0.82032	-0.00040915	498.7703924385365	107.18	1.1359	107.28	106.73	107.87	0.10396					94	42	3	0	0	0	0.73802	1	13079	13079		37.812	7.4938	1	733090	+		23994	21144	16171	16181	27534	27534					0.030817502063428037
KSVAVNPK	8	Unmodified	_KSVAVNPK_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.7579040527344	2	421.758352	841.502152	0.40382	0.00017032	0.067723	2.8563E-05	0.47155	0.00019888	421.7582617863835	17.247	0.57471	16.636	16.429	17.003	-0.6107					26	12	3	0	0	0	0.90523	1	259	259		40.778	3.6191	1	661600			23995	2747	16172	16182	27535	27535					0.07506106105665822
KSVGLKHL	8	Unmodified	_KSVGLKHL_					0	0	0			REV__nc|ENSG00000158560|O14576-4|DYNC1I1	REV__nc|ENSG00000158560|O14576-4|DYNC1I1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.2829284667969	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.79	1	40.796	40.296	41.296	0.0065727								0	0	0	0.3037	1	2959	2959		18.324	4.5491	1		+		23996	20613	16173	16183	27536	27536					0.10438385376642145
KSVGNYKENY	10	Unmodified	_KSVGNYKENY_					0	0	0		ENST00000346234.6_1_9:77761672-77761759:+|nuORF	ENST00000346234.6_1_9:77761672-77761759:+|nuORF	ENST00000346234.6_1_9:77761672-77761759:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	600.3788452148438	2	601.296027	1200.5775	0.25907	0.00015577	2.1254	0.001278	2.3844	0.0014337	601.2962533772796	16.194	0.49497	15.595	15.291	15.786	-0.59873					14	10	2	0	0	0	0.37624	1	114	114		28.081	8.0847	1	33964			23997	10309	16174	16184	27537	27537					-0.014763812245746522
KSVIQRPRRRR	11	Unmodified	_KSVIQRPRRRR_					0	0	0		ENSG00000145416|ENST00000514618|MARCHF1	ENSG00000145416|ENST00000514618|MARCHF1	ENSG00000145416|ENST00000514618|MARCHF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	484.9775390625	3	484.64292	1450.90693	-2.0011	-0.00096983	1.6546	0.0008019	-0.34651	-0.00016793	484.6437071210616	17.58	0.33615	17.58	17.436	17.772	0					28	14	3	0	0	0	0.74771	1	229	229		22.562	4.0305	1	50037			23998	4770	16175	16185	27538	27538					0.19951332636333063
KSVIQRPRRRR	11	Unmodified	_KSVIQRPRRRR_					0	0	0		ENSG00000145416|ENST00000514618|MARCHF1	ENSG00000145416|ENST00000514618|MARCHF1	ENSG00000145416|ENST00000514618|MARCHF1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	484.64292	1450.90693	0.066312	3.2138E-05	0.12421	6.0195E-05	0.19052	9.2333E-05	484.64285972995066	17.412	0.23474	17.474	17.367	17.602	0.062601	-0.0051276	-0.00078577	NaN	22.562	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141280			23999	4770	16175	16185							0.19951332636333063
KSVIQRPRRRR	11	Unmodified	_KSVIQRPRRRR_					0	0	0		ENSG00000145416|ENST00000514618|MARCHF1	ENSG00000145416|ENST00000514618|MARCHF1	ENSG00000145416|ENST00000514618|MARCHF1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	484.64292	1450.90693	0.72134	0.00034959	-2.9356	-0.0014227	-2.2142	-0.0010731	485.30802689103393	17.408	0.21753	17.384	17.304	17.522	-0.024035	-0.095441	-0.0052344	NaN	22.562	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	174340			24000	4770	16175	16185							0.19951332636333063
KSVKGVSRIFP	11	Unmodified	_KSVKGVSRIFP_					0	0	0			REV__ENST00000550224.5_1_12:57137757-57139879:-|nuORF	REV__ENST00000550224.5_1_12:57137757-57139879:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5834655761719	3	406.583674	1216.72919	3.1308	0.0012729	-2.164	-0.00087985	0.96679	0.00039308	406.5827071519945	112.24	0.82966	112.27	112.06	112.89	0.030602					58	32	2	0	0	0	0.77205	1	13569	13569		17.167	1.16	1	1459000	+		24001	28594	16176	16186	27539	27539					0.12949644593800258
KSVKKGFEF	9	Unmodified	_KSVKKGFEF_					0	0	0		ENSG00000168385|ENST00000391971|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000168385|Q15019-2|SEPTIN2;ENST00000366210.2_1_2:242263647-242276275:+|nuORF;ENST00000467971.5_1_2:242255375-242276932:+|nuORF	ENSG00000168385|ENST00000391971|SEPTIN2	ENSG00000168385|ENST00000391971|SEPTIN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.287353515625	2	535.305667	1068.59678	-0.77783	-0.00041638	-2.1791	-0.0011665	-2.9569	-0.0015828	535.3042900794914	85.924	0.49876	86.372	86.069	86.568	0.44736					14	11	2	0	0	0	0.20789	1	10105	10105		26.693	9.3279	1	66378			24002	6396	16177	16187	27540	27540					0.06522619856991696
KSVKKGFEF	9	Unmodified	_KSVKKGFEF_					0	0	0		ENSG00000168385|ENST00000391971|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000168385|Q15019-2|SEPTIN2;ENST00000366210.2_1_2:242263647-242276275:+|nuORF;ENST00000467971.5_1_2:242255375-242276932:+|nuORF	ENSG00000168385|ENST00000391971|SEPTIN2	ENSG00000168385|ENST00000391971|SEPTIN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	535.305667	1068.59678	-0.0019165	-1.0259E-06	-3.917	-0.0020968	-3.9189	-0.0020978	535.3035675434587	86.348	1.2201	86.542	85.885	87.105	0.19379	0.085018	-0.00052501	NaN	19.997	42	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59155			24003	6396	16177	16187							0.06522619856991696
KSVLATEH	8	Unmodified	_KSVLATEH_					0	0	0		nc|ENSG00000164621|Q9Y6J3|SMAD5-AS1	nc|ENSG00000164621|Q9Y6J3|SMAD5-AS1	nc|ENSG00000164621|Q9Y6J3|SMAD5-AS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.74493408203125	2	442.745442	883.476331	0.64135	0.00028395	-1.9375	-0.00085781	-1.2961	-0.00057386	442.74444898749334	89.382	0.64714	89.533	89.182	89.829	0.1519					34	14	3	0	0	0	0.82658	1	8925	8925		21.96	0.25755	1	939150			24004	15062	16178	16188	27541	27541					0.029932118633723803
KSVPPPHLI	9	Unmodified	_KSVPPPHLI_					0	0	0			REV__ENSG00000135144|ENST00000548759|DTX1	REV__ENSG00000135144|ENST00000548759|DTX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3008117675781	2	494.302927	986.591301	-1.6335	-0.00080746	-2.893	-0.00143	-4.5265	-0.0022375	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.7932	1	10082	10082		21.96	1.013	1	46933000	+		24005	19196	16179	16189	27542	27542					0.09746941065179726
KSVPSKKT	8	Unmodified	_KSVPSKKT_					0	0	0		nc|ENSG00000197520|A6PVY3-2|FAM177B;ENSG00000197520|ENST00000445590|FAM177B	nc|ENSG00000197520|A6PVY3-2|FAM177B	nc|ENSG00000197520|A6PVY3-2|FAM177B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7688293457031	2	437.77146	873.528367	-1.1766	-0.00051507	-0.34958	-0.00015304	-1.5261	-0.0006681	437.77143489998485	40.358	2.279	40.947	39.956	42.235	0.58915					112	60	4	0	0	0	0.84191	1	3417	3417		11.511	2.6887	1	5900400			24006	8172	16180	16190	27543	27543					0.08654375277126292
KSVQTIQKTT	10	Unmodified	_KSVQTIQKTT_					0	0	0		ENST00000453838.2_1_1:182928211-182928406:-|nuORF	ENST00000453838.2_1_1:182928211-182928406:-|nuORF	ENST00000453838.2_1_1:182928211-182928406:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3272094726562	2	567.32987	1132.64519	1.8589	0.0010546	-2.0003	-0.0011348	-0.14134	-8.0184E-05	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.82886	1	10262	10262		37.812	2.6595	1	15439000			24007	11935	16181	16191	27544	27544					0.08417068706239661
KSVTEEPNE	9	Unmodified	_KSVTEEPNE_					0	0	0			REV__nc|ENSG00000120500|P36575-2|ARR3	REV__nc|ENSG00000120500|P36575-2|ARR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7482299804688	2	516.745836	1031.47712	-0.62916	-0.00032512	4.136	0.0021373	3.5069	0.0018122	516.7478941673756	65.22	0.5148	65.247	64.92	65.435	0.027138					56	22	3	0	0	0	0.64555	1	6165	6165		44.377	3.599	1	442420	+		24008	18415	16182	16192	27545	27545					-0.03736038278225351
KSVYIGGK	8	Unmodified	_KSVYIGGK_					0	0	0			REV__nc|ENSG00000151208|Q8TDM6-2|DLG5	REV__nc|ENSG00000151208|Q8TDM6-2|DLG5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2523498535156	2	426.252903	850.491253	0.4358	0.00018576	-0.075653	-3.2247E-05	0.36015	0.00015351	426.2528767672863	17.745	0.45401	17.124	16.993	17.447	-0.62141					20	11	3	0	0	0	0.83456	1	304	304		60.972	3.1607	1	150310	+		24009	20240	16183	16193	27546	27546					0.060027037313943765
KSVYRQRF	8	Unmodified	_KSVYRQRF_					0	0	0		ENST00000536731.5_1_1:161476325-161476496:+|nuORF	ENST00000536731.5_1_1:161476325-161476496:+|nuORF	ENST00000536731.5_1_1:161476325-161476496:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.3193359375	2	542.306532	1082.59851	-0.38003	-0.00020609	-4.2355	-0.002297	-4.6156	-0.002503	542.3056252312381	25.982	0.13086	25.724	25.638	25.769	-0.2572					4	2	2	0	0	0	0.4196	1	1378	1378		26.693	0	1	15983			24010	13440	16184	16194	27547	27547					0.06051673665592716
KSWKRRYF	8	Unmodified	_KSWKRRYF_					0	0	0		ENSG00000077420|ENST00000376236|APBB1IP	ENSG00000077420|ENST00000376236|APBB1IP	ENSG00000077420|ENST00000376236|APBB1IP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	585.8314819335938	2	585.830175	1169.6458	-1.7612	-0.0010318	1.7424	0.0010207	-0.018822	-1.1027E-05	585.83107982543	57.473	1.4426	57.507	57.139	58.581	0.033909					83	46	2	0	0	0	0.87922	1	5303	5303		31.955	2.7848	1	158750			24011	1381	16185	16195	27548	27548					0.06775952936595786
KSYDKMTIKAL	11	Unmodified	_KSYDKMTIKAL_					0	0	0			REV__nc|ENSG00000186638|Q5T7B8-3|KIF24	REV__nc|ENSG00000186638|Q5T7B8-3|KIF24	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	649.3639526367188	2	649.362856	1296.71116	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.494	1	62.522	62.022	63.022	0.028133								0	0	0	0.56276	1	5834	5834		23.523	0.48021	1		+		24012	22870	16186	16196	27549	27549					0.07467141556799106
KSYISDILF	9	Unmodified	_KSYISDILF_					0	0	0			REV__ENSG00000137040|ENST00000259569|RANBP6	REV__ENSG00000137040|ENST00000259569|RANBP6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2977905273438	2	543.297507	1084.58046	-1.4063	-0.00076406	0.86028	0.00046739	-0.54606	-0.00029667	543.2978497251211	60.216	0.72805	60.607	60.373	61.101	0.39077					48	20	3	0	0	0	0.19818	1	6411	6411		74.255	10.048	1	1233800	+		24013	19355	16187	16197	27550	27550					0.04155493900225338
KSYLLQKWA	9	Unmodified	_KSYLLQKWA_					0	0	0		ENST00000573937.5_1_17:1707859-1733034:-|nuORF;ENSG00000186532|ENST00000305513|SMYD4	ENST00000573937.5_1_17:1707859-1733034:-|nuORF	ENST00000573937.5_1_17:1707859-1733034:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.82666015625	2	568.826766	1135.63898	-1.1701	-0.00066558	0.84438	0.00048031	-0.32571	-0.00018527	568.8271687534636	65.091	0.44598	65.095	64.817	65.263	0.0046997					21	12	2	0	0	0	0.79277	1	6110	6110		27.047	0.3544	1	101620			24014	7803	16188	16198	27551	27551					0.07658595265388612
KSYVQSLVT	9	Unmodified	_KSYVQSLVT_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7869873046875	2	512.787307	1023.56006	-0.41518	-0.0002129	0.06055	3.1049E-05	-0.35463	-0.00018185	512.7871529206141	28.203	0.66766	28.106	27.707	28.375	-0.096947					39	15	3	0	0	0	0.75725	1	1698	1698		36.447	0.82846	1	213290	+		24015	16877	16189	16199	27552	27552					0.049223232404415285
KTAAAVKR	8	Unmodified	_KTAAAVKR_					0	0	0			REV__ENST00000310137.4_1_11:66384114-66384192:+|nuORF	REV__ENST00000310137.4_1_11:66384114-66384192:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.306884765625	2	422.771794	843.529036	0.19225	8.1277E-05	0.73817	0.00031208	0.93042	0.00039335	422.77194654391445	20.391	0.44861	19.762	19.536	19.984	-0.62961					21	9	3	0	0	0	0.4196	1	664	664		19.104	11.91	1	146220	+		24016	24884	16190	16200	27553	27553					0.10101214716848972
KTAASCSSA	9	Unmodified	_KTAASCSSA_					0	0	0			REV__ENST00000429404.1_1_10:60897597-60897936:-|nuORF	REV__ENST00000429404.1_1_10:60897597-60897936:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.1940002441406	2	413.192185	824.369817	-0.18763	-7.7529E-05	3.8578	0.001594	3.6702	0.0015165	413.19367565265276	78.88	3.1143	78.936	78.489	81.603	0.056122					158	90	2	0	0	0	0.58668	4	7688	7688;7708;7717;7725		47.657	10.629	1	901690	+		24017	26591	16191	16201	27554;27555;27556;27557	27554					-0.04939286693456779
KTAASCSSA	9	Unmodified	_KTAASCSSA_					0	0	0			REV__ENST00000429404.1_1_10:60897597-60897936:-|nuORF	REV__ENST00000429404.1_1_10:60897597-60897936:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.19427490234375	2	413.192185	824.369817	0.11885	4.911E-05	3.5526	0.0014679	3.6714	0.001517	413.19356375040996	78.966	3.3342	78.912	78.52	81.854	-0.053558					185	96	2	0	0	0	0.76764	2	7912	7912;7943		34.173	4.7337	1	948300	+		24018	26591	16191	16201	27558;27559	27558					-0.04939286693456779
KTAASCSSA	9	Unmodified	_KTAASCSSA_					0	0	0			REV__ENST00000429404.1_1_10:60897597-60897936:-|nuORF	REV__ENST00000429404.1_1_10:60897597-60897936:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.1941833496094	2	413.192185	824.369817	0.53899	0.00022271	3.0693	0.0012682	3.6083	0.0014909	413.1933573635661	78.618	3.0297	78.757	78.334	81.364	0.13883					156	98	2	0	0	0	0.6204	4	7457	7435;7446;7457;7465		45.972	8.9438	1	973800	+		24019	26591	16191	16201	27560;27561;27562;27563	27562					-0.04939286693456779
KTADGILR	8	Unmodified	_KTADGILR_					0	0	0			REV__ENST00000397642.3_1_1:247393292-247393445:+|nuORF	REV__ENST00000397642.3_1_1:247393292-247393445:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.25115966796875	2	437.261259	872.507966	-0.38086	-0.00016653	-0.66552	-0.000291	-1.0464	-0.00045754	437.26112087078786	21.936	0.22388	21.877	21.745	21.969	-0.058668					9	6	2	0	0	0	0.8347	1	677	677		23.042	0	1	11655	+		24020	26172	16192	16202	27564	27564					0.0666120461733044
KTADGILR	8	Unmodified	_KTADGILR_					0	0	0			REV__ENST00000397642.3_1_1:247393292-247393445:+|nuORF	REV__ENST00000397642.3_1_1:247393292-247393445:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	437.261259	872.507966	-0.38086	-0.00016653	-0.66552	-0.000291	-1.0464	-0.00045754	437.26112087078786	21.936	0.22388	21.877	21.745	21.969	-0.058668	0	0	NaN	23.042	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11655	+		24021	26172	16192	16202							0.0666120461733044
KTAEELALR	9	Unmodified	_KTAEELALR_					0	0	0			REV__nc|ENSG00000182329|Q0VF49|KIAA2012	REV__nc|ENSG00000182329|Q0VF49|KIAA2012	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	515.7962036132812	2	515.798206	1029.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.445	1	79.576	79.076	80.076	0.13086								0	0	0	0.30778	1	7534	7534		27.882	1.1893	1		+		24022	22518	16193	16203	27565	27565					0.06825127988986424
KTAGKKCL	8	Unmodified	_KTAGKKCL_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	424.7550354003906	2	424.754756	847.494958	-1.9202	-0.00081559	3.1915	0.0013556	1.2714	0.00054002	424.7559612566375	37.287	1.8192	37.287	36.822	38.642	0					90	43	3	0	0	0	0.79929	2	2241	2229;2241		20.482	5.3652	1	792400	+		24023	18464	16194	16204	27566;27567	27567					0.06511050233575588
KTAGKKCL	8	Unmodified	_KTAGKKCL_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	424.754756	847.494958	-1.9202	-0.00081559	3.1915	0.0013556	1.2714	0.00054002	424.7559612566375	37.287	1.8192	37.287	36.822	38.642	0	-0.00050908	0.0010867	NaN	20.482	90	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	792400	+		24024	18464	16194	16204							0.06511050233575588
KTAGKKCL	8	Unmodified	_KTAGKKCL_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	424.754756	847.494958	-0.042923	-1.8232E-05	1.4669	0.00062308	1.424	0.00060485	424.75521626534226	37.445	0.40179	37.421	37.171	37.573	-0.023979	0.13303	-0.00037837	NaN	20.482	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	238490	+		24025	18464	16194	16204							0.06511050233575588
KTAGKKCL	8	Unmodified	_KTAGKKCL_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	424.754756	847.494958	-1.0292	-0.00043716	2.3956	0.0010175	1.3664	0.00058037	424.7557049236725	37.398	0.35531	37.345	37.181	37.537	-0.053558	0.056735	0.00041053	NaN	20.482	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	318690	+		24026	18464	16194	16204							0.06511050233575588
KTAGKKCL	8	Unmodified	_KTAGKKCL_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	424.754756	847.494958	0.62053	0.00026357	0.20486	8.7016E-05	0.82539	0.00035059	424.75466319187666	37.3	0.31428	37.311	37.15	37.464	0.011173	0.02296	-0.0014505	NaN	20.482	18	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272460	+		24027	18464	16194	16204							0.06511050233575588
KTAGKKCL	8	Unmodified	_KTAGKKCL_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	424.754756	847.494958	-1.8167	-0.00077163	2.613	0.0011099	0.79638	0.00033827	424.75593861364024	37.388	0.42539	37.407	37.188	37.613	0.018841	0.11874	0.00059528	NaN	20.482	18	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172850	+		24028	18464	16194	16204							0.06511050233575588
KTAGKKCL	8	Unmodified	_KTAGKKCL_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	424.754756	847.494958	0.16146	6.8581E-05	-1.5674	-0.00066575	-1.4059	-0.00059717	424.75498855840334	37.296	0.57171	37.395	37.157	37.729	0.099274	0.10722	-0.002956	NaN	20.482	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	163220	+		24029	18464	16194	16204							0.06511050233575588
KTAGKKCL	8	Unmodified	_KTAGKKCL_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	424.754756	847.494958	0.74652	0.00031709	0.52414	0.00022263	1.2707	0.00053972	424.75484775106025	36.715	0.44865	36.996	36.849	37.297	0.28173	-0.29148	-0.0011793	NaN	20.482	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	234240	+		24030	18464	16194	16204							0.06511050233575588
KTAGKKCL	8	Unmodified	_KTAGKKCL_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	424.754756	847.494958	1.4869	0.00063158	0.053951	2.2916E-05	1.5409	0.0006545	424.7546104302604	36.676	0.53441	37.141	36.811	37.346	0.46524	-0.1467	-0.0015787	NaN	20.482	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	221130	+		24031	18464	16194	16204							0.06511050233575588
KTAGPQQKN	9	Unmodified	_KTAGPQQKN_					0	0	0		ENSG00000123562|ENST00000441076|MORF4L2	ENSG00000123562|ENST00000441076|MORF4L2	ENSG00000123562|ENST00000441076|MORF4L2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2669677734375	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.76255	1	8389	8389		35.618	2.8059	1	1182200			24032	3279	16195	16205	27568	27568					0.03315401640657001
KTAGPQQKN	9	Unmodified	_KTAGPQQKN_					0	0	0		ENSG00000123562|ENST00000441076|MORF4L2	ENSG00000123562|ENST00000441076|MORF4L2	ENSG00000123562|ENST00000441076|MORF4L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.26702880859375	2	486.267073	970.519593	-0.72648	-0.00035326	0.90847	0.00044176	0.182	8.8499E-05	486.2674012957117	86.085	5.1254	86.27	85.016	90.141	0.18522					327	120	4	0	0	0	0.64922	2	8495	8460;8495		44.117	4.3314	1	1830000			24033	3279	16195	16205	27569;27570	27570					0.03315401640657001
KTAGPQQKN	9	Unmodified	_KTAGPQQKN_					0	0	0		ENSG00000123562|ENST00000441076|MORF4L2	ENSG00000123562|ENST00000441076|MORF4L2	ENSG00000123562|ENST00000441076|MORF4L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.2670593261719	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.64922	3	8476	8476;8541;8583		44.117	6.6056	1	1702800			24034	3279	16195	16205	27571;27572;27573	27571					0.03315401640657001
KTAGPQQKN	9	Unmodified	_KTAGPQQKN_					0	0	0		ENSG00000123562|ENST00000441076|MORF4L2	ENSG00000123562|ENST00000441076|MORF4L2	ENSG00000123562|ENST00000441076|MORF4L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.2671813964844	2	486.267073	970.519593	-1.6066	-0.00078124	1.8314	0.00089055	0.2248	0.00010932	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.55097	1	8530	8530		49.442	5.3247	1	1531500			24035	3279	16195	16205	27574	27574					0.03315401640657001
KTAGTGAAVGR	11	Unmodified	_KTAGTGAAVGR_					0	0	0		ENST00000559275.5_2_14:24617205-24617900:+|nuORF	ENST00000559275.5_2_14:24617205-24617900:+|nuORF	ENST00000559275.5_2_14:24617205-24617900:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.78033447265625	2	494.780348	987.546142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.169	1	84.317	83.817	84.817	0.14793								0	0	0	0.56276	1	8184	8184		27.047	5.0874	1				24036	13807	16196	16206	27575	27575					0.05187090532001548
KTAHRAVS	8	Unmodified	_KTAHRAVS_					0	0	0			REV__ENST00000397415.7_1_6:42848808-42854199:+|nuORF	REV__ENST00000397415.7_1_6:42848808-42854199:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2521667480469	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.89962	1	7224	7224		38.806	0	1	2494100	+		24037	19996	16197	16207	27576	27576					0.04839453677379879
KTAIRLPKGKQ	11	Unmodified	_KTAIRLPKGKQ_					0	0	0		ENSG00000102243|ENST00000370634|VGLL1	ENSG00000102243|ENST00000370634|VGLL1	ENSG00000102243|ENST00000370634|VGLL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.9322814941406	3	413.934706	1238.78229	-1.1382	-0.00047114	-3.9325	-0.0016278	-5.0707	-0.002099	413.9330056480743	43.336	2.2043	43.3	41.98	44.184	-0.03582					131	52	3	0	0	0	0.73277	2	3437	3425;3437		25.892	2.5062	1	471060			24038	1995	16198	16208	27577;27578	27578					0.1724502237645993
KTAKLDLLMQ	10	Unmodified	_KTAKLDLLMQ_					0	0	0		ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24;ENSG00000089737|ENST00000621632|DDX24	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.8411254882812	2	580.839017	1159.66348	0.64193	0.00037286	2.0135	0.0011695	2.6554	0.0015423	580.8399997377094	69.658	0.88029	69.793	69.47	70.351	0.13506					122	43	4	0	0	0	0.86047	1	6342	6342		23.523	0.48021	1	14396000			24039	1632	16199	16209	27579	27579					0.09003487356585538
KTAKLKIRTTA	11	Unmodified	_KTAKLKIRTTA_					0	0	0		ENST00000522207.1_1_8:86351138-86354561:+|nuORF	ENST00000522207.1_1_8:86351138-86354561:+|nuORF	ENST00000522207.1_1_8:86351138-86354561:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	615.8970947265625	2	615.898254	1229.78196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.786	1	57.786	57.286	58.286	0								0	0	0	0.56276	1	4984	4984		29.17	4.9673	1				24040	13183	16200	16210	27580	27580					0.17625602656607953
KTAKNKAPDS	10	Unmodified	_KTAKNKAPDS_					0	0	0		ENST00000479391.6_3_9:98729892-98767017:+|nuORF;ENSG00000182150|ENST00000653738|ERCC6L2	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2930908203125	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.86106	1	9021	9021		33.922	1.9668	1	1390700			24041	7425	16201	16211	27581	27581					0.04507939983614051
KTAKNKAPDS	10	Unmodified	_KTAKNKAPDS_					0	0	0		ENST00000479391.6_3_9:98729892-98767017:+|nuORF;ENSG00000182150|ENST00000653738|ERCC6L2	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.29296875	2	530.293288	1058.57202	-0.034361	-1.8221E-05	0.31371	0.00016636	0.27935	0.00014814	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.80179	1	9389	9389		39.253	1.4413	1	1852900			24042	7425	16201	16211	27582	27582					0.04507939983614051
KTAKNKAPDS	10	Unmodified	_KTAKNKAPDS_					0	0	0		ENST00000479391.6_3_9:98729892-98767017:+|nuORF;ENSG00000182150|ENST00000653738|ERCC6L2	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.29345703125	2	530.293288	1058.57202	2.0317	0.0010774	-1.9029	-0.0010091	0.12876	6.828E-05	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.80179	3	9578	9541;9578;9698		39.253	5.3312	1	1811300			24043	7425	16201	16211	27583;27584;27585	27584					0.04507939983614051
KTAKNKAPDS	10	Unmodified	_KTAKNKAPDS_					0	0	0		ENST00000479391.6_3_9:98729892-98767017:+|nuORF;ENSG00000182150|ENST00000653738|ERCC6L2	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2935791015625	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.86348	1	9404	9404		31.53	1.0262	1	1864800			24044	7425	16201	16211	27586	27586					0.04507939983614051
KTAKNKAPDS	10	Unmodified	_KTAKNKAPDS_					0	0	0		ENST00000479391.6_3_9:98729892-98767017:+|nuORF;ENSG00000182150|ENST00000653738|ERCC6L2	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2931518554688	2	530.293288	1058.57202	-1.5163	-0.00080409	1.7205	0.00091237	0.2042	0.00010828	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.76096	2	9012	9012;9144		41.427	2.1738	1	1686700			24045	7425	16201	16211	27587;27588	27587					0.04507939983614051
KTAKTKQK	8	Unmodified	_KTAKTKQK_					0	0	0		ENSG00000068784|ENST00000263736|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7972412109375	2	466.798009	931.581465	0.35994	0.00016802	-1.4055	-0.00065611	-1.0456	-0.00048809	466.79729216650486	19.702	2.2945	19.233	18.459	20.753	-0.46967					107	51	4	0	0	0	0.7961	1	608	608		17.365	1.7232	1	2065900			24046	1207	16202	16212	27589	27589					0.11293753059806022
KTALQTLKN	9	Unmodified	_KTALQTLKN_					0	0	0			REV__nc|ENSG852|P61578|ERVK-16_rec	REV__nc|ENSG852|P61578|ERVK-16_rec	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.80767822265625	2	508.808574	1015.60259	-0.95319	-0.00048499	-0.53133	-0.00027035	-1.4845	-0.00075534	508.8082107511822	83.728	2.644	83.728	82.933	85.577	0					147	63	5	0	0	0	0.71772	1	7891	7891		39.253	8.7492	1	4920100	+		24047	30317	16203	16213	27590	27590					0.09541718368666352
KTALQTLKN	9	Unmodified	_KTALQTLKN_					0	0	0			REV__nc|ENSG852|P61578|ERVK-16_rec	REV__nc|ENSG852|P61578|ERVK-16_rec	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.8068542480469	2	508.808574	1015.60259	0.33751	0.00017173	-2.0744	-0.0010555	-1.7369	-0.00088377	508.8074006535315	89.921	1.4701	89.969	89.439	90.909	0.048157					61	34	2	0	0	0	0.77696	1	9303	9303		31.53	2.3803	1	1159300	+		24048	30317	16203	16213	27591	27591					0.09541718368666352
KTALQTLKN	9	Unmodified	_KTALQTLKN_					0	0	0			REV__nc|ENSG852|P61578|ERVK-16_rec	REV__nc|ENSG852|P61578|ERVK-16_rec	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.8077392578125	2	508.808574	1015.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.251	1	83.31	82.81	83.81	0.05925								0	0	0	0.29134	1	8363	8363		34.173	5.023	1		+		24049	30317	16203	16213	27592	27592					0.09541718368666352
KTALRMVL	8	Unmodified	_KTALRMVL_					0	0	0			REV__ENST00000416077.1_1_6:51274881-51275238:-|nuORF	REV__ENST00000416077.1_1_6:51274881-51275238:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2908630371094	2	466.291505	930.568457	-1.0456	-0.00048758	-2.49	-0.0011611	-3.5356	-0.0016486	466.29021591001344	73.859	1.0735	73.986	73.713	74.787	0.1271					83	42	3	0	0	0	0.90465	1	6777	6777		40.573	5.3719	1	958110	+		24050	20019	16204	16214	27593	27593					0.10039598676064543
KTALRMVL	8	Unmodified	_KTALRMVL_					0	0	0			REV__ENST00000416077.1_1_6:51274881-51275238:-|nuORF	REV__ENST00000416077.1_1_6:51274881-51275238:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.28961181640625	2	466.291505	930.568457	0.52735	0.0002459	-4.0667	-0.0018963	-3.5394	-0.0016504	466.28951494352106	73.831	0.94804	73.962	73.721	74.669	0.13127					82	37	3	0	0	0	0.67263	1	6829	6829		68.485	2.5872	1	894650	+		24051	20019	16204	16214	27594	27594					0.10039598676064543
KTALRSLRSE	10	Unmodified	_KTALRSLRSE_					0	0	0			REV__ENSG00000166262|ENST00000299338|FAM227B	REV__ENSG00000166262|ENST00000299338|FAM227B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.8396606445312	2	580.840936	1159.66732	-0.90693	-0.00052678	0.19514	0.00011335	-0.71179	-0.00041344	580.8407767096548	69.755	0.8518	69.79	69.548	70.399	0.035622					124	41	4	0	0	0	0.86802	1	6730	6730		27.047	1.4733	1	14836000	+		24052	21272	16205	16215	27595	27595					0.09387293174654587
KTAQKLIDT	9	Unmodified	_KTAQKLIDT_					0	0	0			REV__ENST00000456608.1_1_13:20137971-20138526:-|nuORF	REV__ENST00000456608.1_1_13:20137971-20138526:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.243896484375	2	509.300581	1016.58661	0.31685	0.00016137	-4.2569	-0.0021681	-3.9401	-0.0020067	509.29838145025906	45.884	0.14407	45.927	45.815	45.959	0.042599					5	3	2	0	0	0	0.20789	1	3326	3326		27.882	10.517	1	33924	+		24053	26958	16206	16216	27596	27596					0.07898012131749965
KTAQLQSKL	9	Unmodified	_KTAQLQSKL_					0	0	0			REV__nc|ENSG00000169247|Q8TF17-5|SH3TC2	REV__nc|ENSG00000169247|Q8TF17-5|SH3TC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.8075256347656	2	508.808574	1015.60259	-0.055595	-2.8287E-05	-1.6183	-0.00082341	-1.6739	-0.0008517	508.8077132921667	83.422	2.5883	83.489	82.396	84.985	0.066719					89	59	2	0	0	0	0.7932	1	8322	8322		26.693	1.1189	1	2642300	+		24054	21563	16207	16217	27597	27597					0.09541718368666352
KTARLNARLGL	11	Unmodified	_KTARLNARLGL_					0	0	0			REV__nc|ENSG00000137804|Q9BXS6-4|NUSAP1	REV__nc|ENSG00000137804|Q9BXS6-4|NUSAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.9236145019531	3	404.922689	1211.74624	-0.36148	-0.00014637	0.96527	0.00039086	0.60379	0.00024449	404.9229767423174	26.33	2.0851	26.291	25.89	27.975	-0.038523					105	48	5	0	0	0	0.76892	1	1152	1152		17.833	3.1395	1	394560	+		24055	19406	16208	16218	27598	27598					0.14883565199579607
KTARPNITD	9	Unmodified	_KTARPNITD_					0	0	0		nc|ENSG00000128591|Q14315-2|FLNC;ENSG00000128591|ENST00000325888|FLNC	nc|ENSG00000128591|Q14315-2|FLNC	nc|ENSG00000128591|Q14315-2|FLNC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2801208496094	2	508.28018	1014.54581	0.22565	0.0001147	-0.11322	-5.7546E-05	0.11244	5.715E-05	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.73802	1	9067	9067		37.812	1.3648	1	1820400			24056	3549	16209	16219	27599	27599					0.03911670812135526
KTARPNITD	9	Unmodified	_KTARPNITD_					0	0	0		nc|ENSG00000128591|Q14315-2|FLNC;ENSG00000128591|ENST00000325888|FLNC	nc|ENSG00000128591|Q14315-2|FLNC	nc|ENSG00000128591|Q14315-2|FLNC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2795104980469	2	508.28018	1014.54581	0.65224	0.00033152	-0.58773	-0.00029873	0.064515	3.2792E-05	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.69624	1	10516	10516		40.778	11.608	1	1819500			24057	3549	16209	16219	27600	27600					0.03911670812135526
KTASLKYLLN	10	Unmodified	_KTASLKYLLN_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8432006835938	2	575.845156	1149.67576	-0.49921	-0.00028747	-3.2743	-0.0018855	-3.7735	-0.002173	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.8651	1	8686	8686		25.574	1.0549	1	1518700	+		24058	18606	16210	16220	27601	27601					0.10690847091314026
KTATIIIHA	9	Unmodified	_KTATIIIHA_					0	0	0		ENSG00000149403|ENST00000527524|GRIK4;ENST00000533291.5_1_11:120531027-120833419:+|nuORF	ENSG00000149403|ENST00000527524|GRIK4	ENSG00000149403|ENST00000527524|GRIK4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.2857971191406	2	484.300384	966.586216	-0.092532	-4.4813E-05	-0.18272	-8.8493E-05	-0.27526	-0.00013331	484.3002446740158	60.817	0.64874	60.805	60.436	61.085	-0.012203					33	20	2	0	0	0	0.20789	1	5620	5620		50.025	11.218	1	142920			24059	5022	16211	16221	27602	27602					0.10158637202573573
KTATIIIHA	9	Unmodified	_KTATIIIHA_					0	0	0		ENSG00000149403|ENST00000527524|GRIK4;ENST00000533291.5_1_11:120531027-120833419:+|nuORF	ENSG00000149403|ENST00000527524|GRIK4	ENSG00000149403|ENST00000527524|GRIK4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	484.300384	966.586216	-2.5686	-0.001244	2.8646	0.0013873	0.29605	0.00014338	484.30158719569226	60.652	0.60243	60.683	60.351	60.953	0.0312	-0.031481	0.0019448	NaN	50.025	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132460			24060	5022	16211	16221							0.10158637202573573
KTATTTPGFVD	11	Unmodified	_KTATTTPGFVD_					0	0	0		nc|ENSG00000125386|P78312-4|FAM193A;nc|ENSG00000125386|P78312-6|FAM193A;nc|ENSG00000125386|P78312-2|FAM193A;nc|ENSG00000125386|P78312-5|FAM193A;nc|ENSG00000125386|P78312|FAM193A;ENSG00000125386|ENST00000637812|FAM193A;nc|ENSG00000125386|P78312-3|FAM193A	nc|ENSG00000125386|P78312-4|FAM193A	nc|ENSG00000125386|P78312-4|FAM193A	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.2940063476562	2	569.292953	1136.57135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.866	1	79.866	79.366	80.366	0								0	0	0	0.56276	1	7356	7356		26.063	0.61321	1				24061	3385	16212	16222	27603	27603					0.008531005439181172
KTCFSAKLY	9	Unmodified	_KTCFSAKLY_					0	0	0			REV__ENST00000608694.1_1_7:129250897-129251161:-|nuORF	REV__ENST00000608694.1_1_7:129250897-129251161:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7784423828125	2	530.778428	1059.5423	0.54385	0.00028866	0.39797	0.00021124	0.94182	0.0004999	530.7785064746369	56.876	1.1282	57.431	57.181	58.309	0.55513					49	27	3	0	0	0	0.6204	1	5917	5917		45.972	0	1	3022800	+		24062	29400	16213	16223	27604	27604					0.014912847139157748
KTCLSPGSSEM	11	Unmodified	_KTCLSPGSSEM_					0	0	0		ENSG00000101745|ENST00000262126|ANKRD12;nc|ENSG00000101745|Q6UB98-2|ANKRD12	ENSG00000101745|ENST00000262126|ANKRD12	ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.261474609375	2	570.257199	1138.49985	0.47262	0.00026951	2.8256	0.0016113	3.2982	0.0018808	570.2587836391257	63.069	0.50438	63.183	62.915	63.419	0.11388					35	23	2	0	0	0	0.72739	1	5509	5509		27.047	1.4733	1	135130			24063	1956	16214	16224	27605	27605					-0.06386478476611046
KTCLVDLKV	9	Unmodified	_KTCLVDLKV_					0	0	0			REV__nc|ENSG00000135318|P21589-2|NT5E	REV__nc|ENSG00000135318|P21589-2|NT5E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8039855957031	2	509.801903	1017.58925	0.54005	0.00027532	3.4914	0.0017799	4.0315	0.0020552	509.80356957278343	84.302	2.3533	84.749	83.349	85.703	0.44736					134	57	3	0	0	0	0.7932	1	9841	9841		25.574	0	1	950450	+		24064	19209	16215	16225	27606	27606					0.08116144265068215
KTCREGFVI	9	Unmodified	_KTCREGFVI_					0	0	0		ENST00000377242.7_1_10:20105420-20105621:+|nuORF	ENST00000377242.7_1_10:20105420-20105621:+|nuORF	ENST00000377242.7_1_10:20105420-20105621:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.77978515625	2	526.781502	1051.54845	-0.039773	-2.0952E-05	-3.1255	-0.0016465	-3.1653	-0.0016674	526.7796901586527	62.695	1.081	62.69	62.4	63.481	-0.0055504					101	51	3	0	0	0	0.38563	1	5820	5820		58.782	2.0609	1	675050			24065	10831	16216	16226	27607	27607					0.02473802945451098
KTCRPVLVP	9	Unmodified	_KTCRPVLVP_					0	0	0			REV__ENST00000590152.1_1_19:9267386-9267698:+|nuORF	REV__ENST00000590152.1_1_19:9267386-9267698:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.7991943359375	2	506.802237	1011.58992	0.37466	0.00018988	-2.5213	-0.0012778	-2.1467	-0.0010879	506.8009308799893	52.874	1.5356	52.945	51.808	53.344	0.070713					73	47	2	0	0	0	0.7932	1	4294	4294		25.45	2.4077	1	186720	+		24066	29173	16217	16227	27608	27608					0.08458983704758793
KTCSDMESR	9	Carbamidomethyl (C)	_KTC(Carbamidomethyl (C))SDMESR_	KTC(1)SDMESR		KTC(44)SDMESR		0	1	0			REV__ENST00000531507.5_1_11:10827534-10828858:-|nuORF	REV__ENST00000531507.5_1_11:10827534-10828858:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.2384033203125	2	557.236798	1112.45904	0.16632	9.2678E-05	2.8223	0.0015727	2.9887	0.0016654	557.2383002667391	28.256	0.42011	28.216	27.974	28.394	-0.039907					16	8	3	0	0	0	0.64922	1	1407	1407		44.117	7.67	1	45343	+		24067	28287	16218	16228	27609	27609	347				-0.09268819796238859
KTDKAAKL	8	Unmodified	_KTDKAAKL_					0	0	0			REV__ENSG00000183304|ENST00000381003|FAM9A	REV__ENSG00000183304|ENST00000381003|FAM9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7709655761719	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.80959	1	2273	2273		15.642	1.5047	1	1151500	+		24068	22593	16219	16229	27610	27610					0.08654375277126292
KTDKAAKL	8	Unmodified	_KTDKAAKL_					0	0	0			REV__ENSG00000183304|ENST00000381003|FAM9A	REV__ENSG00000183304|ENST00000381003|FAM9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7713623046875	2	437.77146	873.528367	0.18916	8.281E-05	-0.44353	-0.00019417	-0.25437	-0.00011136	437.77124644611854	39.786	1.476	39.875	39.186	40.662	0.088375					62	41	2	0	0	0	0.81897	1	2476	2476		20.947	2.6225	1	3151300	+		24069	22593	16219	16229	27611	27611					0.08654375277126292
KTDKNITIK	9	Unmodified	_KTDKNITIK_					0	0	0			REV__ENSG00000168255|ENST00000513506|POLR2J3	REV__ENSG00000168255|ENST00000513506|POLR2J3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.81689453125	2	530.821681	1059.62881	-0.65898	-0.0003498	-0.95573	-0.00050732	-1.6147	-0.00085712	530.8210854793529	86.544	0.73225	86.998	86.735	87.467	0.45429					29	17	2	0	0	0	0.20789	1	10171	10171		34.173	7.4796	1	993120	+		24070	21472	16220	16230	27612	27612					0.10137987540110771
KTDLDLQQY	9	Unmodified	_KTDLDLQQY_					0	0	0		ENSG00000171488|ENST00000370454|LRRC8C	ENSG00000171488|ENST00000370454|LRRC8C	ENSG00000171488|ENST00000370454|LRRC8C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.283935546875	2	562.285128	1122.5557	-1.1018	-0.00061951	0.53257	0.00029946	-0.5692	-0.00032005	562.2852883430395	50.312	0.54212	50.31	50.068	50.61	-0.0020447					22	12	2	0	0	0	0.58063	1	4273	4273		47.96	5.0953	1	152890			24071	6671	16221	16231	27613	27613					-0.0006718597312556085
KTDLDLQQY	9	Unmodified	_KTDLDLQQY_					0	0	0		ENSG00000171488|ENST00000370454|LRRC8C	ENSG00000171488|ENST00000370454|LRRC8C	ENSG00000171488|ENST00000370454|LRRC8C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	562.2850341796875	2	562.285128	1122.5557	-0.40654	-0.00022859	0.42397	0.00023839	0.017432	9.8018E-06	562.2850640587922	50.302	0.73635	50.278	49.944	50.68	-0.02343					32	16	3	0	0	0	0.16822	2	4353	4353;4366		80.455	10.827	1	216280			24072	6671	16221	16231	27614;27615	27614					-0.0006718597312556085
KTDLDLQQY	9	Unmodified	_KTDLDLQQY_					0	0	0		ENSG00000171488|ENST00000370454|LRRC8C	ENSG00000171488|ENST00000370454|LRRC8C	ENSG00000171488|ENST00000370454|LRRC8C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.2853393554688	2	562.285128	1122.5557	0.51675	0.00029056	-0.84848	-0.00047709	-0.33174	-0.00018653	562.284398654235	50.369	0.61137	50.373	50.078	50.689	0.0045319					29	13	3	0	0	0	0.41984	1	4290	4290		56.434	1.6575	1	188800			24073	6671	16221	16231	27616	27616					-0.0006718597312556085
KTDSDMFI	8	Unmodified	_KTDSDMFI_					0	0	0		ENSG00000183778|ENST00000684187|B3GALT5	ENSG00000183778|ENST00000684187|B3GALT5	ENSG00000183778|ENST00000684187|B3GALT5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7286071777344	2	478.723318	955.432083	2.3252	0.0011131	2.173	0.0010403	4.4981	0.0021534	478.72402920909207	103.25	0.33643	103.51	103.33	103.67	0.26524					10	7	2	0	0	0	0.4196	1	12610	12610		25.45	12.491	1	145730			24074	7560	16222	16232	27617	27617					-0.04741560345121343
KTEANLEVL	9	Unmodified	_KTEANLEVL_					0	0	0		ENST00000523631.5_1_8:125507623-125520750:-|nuORF;ENST00000518485.5_1_8:125506072-125516651:-|nuORF;ENST00000523214.5_1_8:125500837-125516518:-|nuORF;nc|ENSG00000147687|Q6P1N9-2|TATDN1;ENSG00000147687|ENST00000276692|TATDN1	ENST00000523631.5_1_8:125507623-125520750:-|nuORF	ENST00000523631.5_1_8:125507623-125520750:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.78338623046875	2	508.784764	1015.55498	-1.5374	-0.00078218	0.069339	3.5278E-05	-1.468	-0.0007469	508.7847523224276	42.315	0.89218	42.73	42.468	43.36	0.41553					45	21	3	0	0	0	0.051853	1	3771	3771		107.01	7.6326	1	1231100			24075	4920	16223	16233	27618	27618					0.04782019377819324
KTEELKKRLP	10	Unmodified	_KTEELKKRLP_					0	0	0		nc|ENSG00000134744|Q5TAX3|TUT4;ENSG00000134744|ENST00000257177|TUT4	nc|ENSG00000134744|Q5TAX3|TUT4	nc|ENSG00000134744|Q5TAX3|TUT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.59112548828125	3	414.590717	1240.75032	0.73309	0.00030393	0.82463	0.00034188	1.5577	0.00064582	414.5908881291252	32.401	0.76654	32.508	32.189	32.956	0.10707					47	17	4	0	0	0	0.63899	1	2302	2302		47.96	3.3201	1	854600			24076	3953	16224	16234	27619	27619					0.13957609902649892
KTEGPTPIPSL	11	Unmodified	_KTEGPTPIPSL_					0	0	0		ENSG00000113889|ENST00000644859|KNG1	ENSG00000113889|ENST00000644859|KNG1	ENSG00000113889|ENST00000644859|KNG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8397216796875	2	570.318971	1138.62339	0.34382	0.00019609	3.7763	0.0021537	4.1202	0.0023498	570.3234790193565	50.277	0.6595	50.725	50.266	50.926	0.4476					17	15	2	0	0	0	0.17318	1	4963	4963		13.454	0	1	101350			24077	2750	16225	16235	27620	27620					0.059622639576673464
KTEKKTVQFSD	11	Unmodified	_KTEKKTVQFSD_					0	0	0		nc|ENSG00000136738|Q92783-2|STAM;ENSG00000136738|ENST00000377524|STAM	nc|ENSG00000136738|Q92783-2|STAM	nc|ENSG00000136738|Q92783-2|STAM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.56951904296875	3	437.56987	1309.68778	0.14053	6.1493E-05	0.16409	7.1802E-05	0.30462	0.00013329	437.569795972988	34.491	0.53151	34.6	34.322	34.853	0.10829					55	23	3	0	0	0	0.73277	1	1758	1758		25.892	0.76573	1	195820			24078	4133	16226	16236	27621	27621					0.04532419043812297
KTELLKKAK	9	Unmodified	_KTELLKKAK_					0	0	0			REV__ENSG00000160007|ENST00000672722|ARHGAP35	REV__ENSG00000160007|ENST00000672722|ARHGAP35	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.265869140625	2	529.850242	1057.68593	-0.22359	-0.00011847	-0.79364	-0.00042051	-1.0172	-0.00053898	529.8523832514902	57.074	0.74331	57.471	57.116	57.859	0.39672					38	17	3	0	0	0	0.20789	1	5882	5882		32.812	13.709	1	307660	+		24079	20688	16227	16237	27622	27622					0.15939454816498255
KTELTVIRKEF	11	Unmodified	_KTELTVIRKEF_					0	0	0			REV__nc|ENSG00000080709|Q9H2S1-2|KCNN2	REV__nc|ENSG00000080709|Q9H2S1-2|KCNN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.222412109375	3	455.269643	1362.7871	-0.076549	-3.485E-05	-2.1791	-0.00099209	-2.2557	-0.0010269	455.26863769469105	18.437	0.3732	17.96	17.703	18.077	-0.47694					11	7	2	0	0	0	0.17955	1	373	373		8.7993	1.458	1	52150	+		24080	16809	16228	16238	27623	27623					0.12021861728544536
KTELVWLK	8	Unmodified	_KTELVWLK_					0	0	0			REV__ENSG00000163811|ENST00000407426|WDR43	REV__ENSG00000163811|ENST00000407426|WDR43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.80743408203125	2	508.810585	1015.60662	-0.95318	-0.00048499	-4.4844	-0.0022817	-5.4376	-0.0027667	508.8082107511822	83.728	2.644	83.728	82.933	85.577	0					147	63	5	0	0	0	0.8347	1	7838	7838		23.042	0.46283	1	4920100	+		24081	20975	16229	16239	27624	27624					0.09943807862373433
KTENGVIP	8	Unmodified	_KTENGVIP_					0	0	0		ENST00000555671.1_1_14:75506710-75513832:-|nuORF;nc|ENSG00000119684|Q9UHC1-2|MLH3;ENSG00000119684|ENST00000355774|MLH3	ENST00000555671.1_1_14:75506710-75513832:-|nuORF	ENST00000555671.1_1_14:75506710-75513832:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.7504577636719	2	429.239993	856.465432	-1.7506	-0.00075144	-3.4107	-0.001464	-5.1613	-0.0022154	429.2401697725718	35.82	0.12741	35.851	35.799	35.927	0.031132					5	3	2	0	0	0	0.4196	1	1925	1925		47.657	13.485	1	25746			24082	3087	16230	16240	27625	27625					0.03145809489092244
KTENGVIP	8	Unmodified	_KTENGVIP_					0	0	0		ENST00000555671.1_1_14:75506710-75513832:-|nuORF;nc|ENSG00000119684|Q9UHC1-2|MLH3;ENSG00000119684|ENST00000355774|MLH3	ENST00000555671.1_1_14:75506710-75513832:-|nuORF	ENST00000555671.1_1_14:75506710-75513832:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	429.239993	856.465432	0.66389	0.00028497	-2.6639	-0.0011435	-2	-0.00085848	429.23736542756143	36.158	0.18273	36.167	36.073	36.256	0.0092773	0.15794	0.00040175	NaN	47.657	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11869			24083	3087	16230	16240							0.03145809489092244
KTENSISIK	9	Unmodified	_KTENSISIK_					0	0	0			REV__nc|ENSG00000118705|P04844-2|RPN2	REV__nc|ENSG00000118705|P04844-2|RPN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2895202636719	2	510.290214	1018.56587	0.67808	0.00034602	-0.86404	-0.00044091	-0.18595	-9.4889E-05	510.2897731406001	16.744	0.4302	16.257	16.098	16.528	-0.48718					15	9	3	0	0	0	0.51592	1	166	166		51.193	1.6567	1	129030	+		24084	29806	16231	16241	27626	27626					0.05733421752097456
KTETAPLV	8	Unmodified	_KTETAPLV_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.750244140625	2	429.750193	857.485833	-1.7422	-0.0007487	2.3085	0.00099207	0.56632	0.00024338	429.7510562737313	35.44	2.4929	35.471	35.255	37.748	0.031132					176	69	3	0	0	0	0.88601	1	1875	1875		34.173	7.4796	1	1409200			24085	3326	16232	16242	27627	27627					0.051389801488994635
KTETAPLV	8	Unmodified	_KTETAPLV_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.7502746582031	2	429.750193	857.485833	0.14732	6.3313E-05	0.46597	0.00020025	0.6133	0.00026357	429.7502450669041	35.27	2.574	35.376	35.139	37.713	0.10604					195	79	3	0	0	0	0.93786	1	1925	1925		53.351	5.6941	1	1419900			24086	3326	16232	16242	27628	27628					0.051389801488994635
KTETAPLV	8	Unmodified	_KTETAPLV_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.75018310546875	2	429.750193	857.485833	0.008359	3.5923E-06	0.60443	0.00025975	0.61279	0.00026335	429.7502794012024	35.489	2.8966	35.429	35.209	38.105	-0.060337					197	86	4	0	0	0	0.79403	2	1955	1955;1965		63.306	4.9543	1	1630800			24087	3326	16232	16242	27629;27630	27629					0.051389801488994635
KTETAPLV	8	Unmodified	_KTETAPLV_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7508850097656	2	429.750193	857.485833	0.60427	0.00025969	0.37111	0.00015949	0.97539	0.00041917	429.75036736011566	34.927	1.9228	35.138	34.854	36.777	0.21003					152	48	4	0	0	0	0.89494	2	2612	2612;2635		38.806	5.9937	1	5113100			24088	3326	16232	16242	27631;27632	27631					0.051389801488994635
KTETAPLV	8	Unmodified	_KTETAPLV_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.75091552734375	2	429.750193	857.485833	1.5892	0.00068294	-0.58551	-0.00025162	1.0037	0.00043132	429.74995933180253	34.855	1.9588	35.237	34.934	36.893	0.3812					144	49	4	0	0	0	0.89962	3	2647	2647;2707;2719		51.335	0.99462	1	5947200			24089	3326	16232	16242	27633;27634;27635	27633					0.051389801488994635
KTEWEALELT	10	Unmodified	_KTEWEALELT_					0	0	0		ENSG00000125037|ENST00000245046|EMC3	ENSG00000125037|ENST00000245046|EMC3	ENSG00000125037|ENST00000245046|EMC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7843322753906	3	407.211683	1218.61322	1.5971	0.00065037	0.49551	0.00020178	2.0926	0.00085215	407.21182236216	34.877	0.6694	35.087	34.769	35.439	0.21003					24	16	2	0	0	0	0.37624	1	2589	2589		18.531	0	1	136020			24090	3372	16233	16243	27636	27636					0.012656562324309562
KTFAQARAY	9	Unmodified	_KTFAQARAY_					0	0	0		ENSG00000175899|ENST00000318602|A2M	ENSG00000175899|ENST00000318602|A2M	ENSG00000175899|ENST00000318602|A2M	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7733154296875	2	528.285266	1054.55598	-0.4421	-0.00023355	-3.5929	-0.0018981	-4.035	-0.0021316	528.283409520324	59.862	0.60914	60.415	60.079	60.688	0.55323					21	15	2	0	0	0	0.20789	1	6331	6331		42.396	0	1	360580			24091	7043	16234	16244	27637	27637					0.030882785373478328
KTFDRIGK	8	Unmodified	_KTFDRIGK_					0	0	0		nc|ENSG00000177888|Q5SVQ8-2|ZBTB41;ENST00000467322.1_1_1:197145142-197169603:-|nuORF;ENSG00000177888|ENST00000367405|ZBTB41	nc|ENSG00000177888|Q5SVQ8-2|ZBTB41	nc|ENSG00000177888|Q5SVQ8-2|ZBTB41	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.78277587890625	2	482.782359	963.550165	0.52443	0.00025319	-0.67416	-0.00032547	-0.14973	-7.2285E-05	482.7819474637983	32.969	0.422	33.139	32.934	33.356	0.16971					15	9	2	0	0	0	0.89679	1	2351	2351		37.812	0.65241	1	164360			24092	7169	16235	16245	27638	27638					0.06693180025706624
KTFDRIGK	8	Unmodified	_KTFDRIGK_					0	0	0		nc|ENSG00000177888|Q5SVQ8-2|ZBTB41;ENST00000467322.1_1_1:197145142-197169603:-|nuORF;ENSG00000177888|ENST00000367405|ZBTB41	nc|ENSG00000177888|Q5SVQ8-2|ZBTB41	nc|ENSG00000177888|Q5SVQ8-2|ZBTB41	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	482.782359	963.550165	0.44527	0.00021497	-0.13875	-6.6987E-05	0.30652	0.00014798	482.78199948867496	32.927	0.80062	33.139	32.723	33.524	0.21168	0.00026713	0.00031615	NaN	37.812	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	168360			24093	7169	16235	16245							0.06693180025706624
KTFEGNLTTK	10	Unmodified	_KTFEGNLTTK_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.8096923828125	2	569.808771	1137.60299	-0.80528	-0.00045885	0.88933	0.00050675	0.084053	4.7894E-05	569.8092195262177	29.033	0.82348	29.003	28.693	29.517	-0.029207					42	18	4	0	0	0	0.27092	2	1786	1786;1811		75.652	12.169	1	606530			24094	6918	16236	16246	27639;27640	27639					0.039690932978373894
KTFEGNLTTK	10	Unmodified	_KTFEGNLTTK_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	569.808771	1137.60299	1.299	0.00074016	-1.2493	-0.00071184	0.049688	2.8313E-05	569.8079203595627	29.17	0.68801	28.997	28.717	29.405	-0.17336	-0.0033532	-0.0017429	NaN	75.652	40	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	792470			24095	6918	16236	16246							0.039690932978373894
KTFEINPRH	9	Unmodified	_KTFEINPRH_					0	0	0		ENSG00000166598|ENST00000299767|HSP90B1;ENST00000415545.2_1_1:92108345-92109332:+|nuORF;nc|ENSG00000259706|Q58FF3|HSP90B2P	ENSG00000166598|ENST00000299767|HSP90B1	ENSG00000166598|ENST00000299767|HSP90B1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3001098632812	2	571.309272	1140.60399	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.733	1	78.86	78.36	79.36	0.12695								0	0	0	0.29475	1	7437	7437		32.812	9.7699	1				24096	6216	16237	16247	27641	27641					0.03931352457425419
KTFGSFTAKLA	11	Unmodified	_KTFGSFTAKLA_					0	0	0			REV__nc|ENSG00000134954|P14921-5|ETS1	REV__nc|ENSG00000134954|P14921-5|ETS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	585.8314819335938	2	585.829506	1169.64446	0.49853	0.00029205	0.81855	0.00047953	1.3171	0.00077158	585.8298665984416	57.52	1.1205	57.626	57.378	58.498	0.1055					94	54	2	0	0	0	0.45916	1	4901	4901		54.776	8.8041	1	190780	+		24097	19177	16238	16248	27642	27642					0.06642274057185205
KTFIKVST	8	Unmodified	_KTFIKVST_					0	0	0		nc|ENSG00000160321|O43345-2|ZNF208;ENSG00000160321|ENST00000397126|ZNF208	nc|ENSG00000160321|O43345-2|ZNF208	nc|ENSG00000160321|O43345-2|ZNF208	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	462.2821350097656	2	462.28166	922.548768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.62	1	114.56	114.06	115.06	-0.05722								0	0	0	0.29264	1	12264	12264		29.15	6.1071	1				24098	5580	16239	16249	27643	27643					0.0843954593693752
KTFINKIFTE	10	Unmodified	_KTFINKIFTE_					0	0	0			REV__ENSG00000172869|ENST00000539542|DMXL1	REV__ENSG00000172869|ENST00000539542|DMXL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2668762207031	3	414.236051	1239.68632	-1.3763	-0.00057013	-1.692	-0.0007009	-3.0684	-0.001271	414.2351586126472	39.86	0.77567	39.816	39.45	40.226	-0.043694					26	17	2	0	0	0	0.37624	1	2901	2901		19.263	3.9296	1	111580	+		24099	21860	16240	16250	27644	27644					0.07606829745691357
KTFLTGQSPE	10	Unmodified	_KTFLTGQSPE_					0	0	0			REV__nc|ENSG00000185220|Q6P3X8-2|PGBD2	REV__nc|ENSG00000185220|Q6P3X8-2|PGBD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.2884521484375	2	554.287671	1106.56079	-1.3781	-0.00076384	2.5117	0.0013922	1.1337	0.00062837	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.86471	1	2458	2458		30.318	5.7985	1	328550	+		24100	22747	16241	16251	27645	27645					0.011771178894605328
KTFPNTIEH	9	Unmodified	_KTFPNTIEH_					0	0	0		ENSG00000184677|ENST00000375647|ZBTB40	ENSG00000184677|ENST00000375647|ZBTB40	ENSG00000184677|ENST00000375647|ZBTB40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.7822875976562	2	543.782556	1085.55056	-0.9073	-0.00049338	-0.19404	-0.00010552	-1.1013	-0.00059889	543.7821288685951	32.032	0.89849	32.158	31.604	32.503	0.12643					50	20	3	0	0	0	0.24527	1	2192	2192		69.628	10.846	1	344460			24101	7638	16242	16252	27646	27646					0.011205549548776617
KTFPNTIEH	9	Unmodified	_KTFPNTIEH_					0	0	0		ENSG00000184677|ENST00000375647|ZBTB40	ENSG00000184677|ENST00000375647|ZBTB40	ENSG00000184677|ENST00000375647|ZBTB40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.7828369140625	2	543.782556	1085.55056	0.26988	0.00014675	-1.4354	-0.00078053	-1.1655	-0.00063377	543.7814170421531	31.842	1.1132	31.95	31.505	32.619	0.10707					59	25	4	0	0	0	0.11055	2	2198	2198;2217		90.37	21.583	1	355150			24102	7638	16242	16252	27647;27648	27647					0.011205549548776617
KTFRIKRFLA	10	Unmodified	_KTFRIKRFLA_					0	0	0		ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.2713928222656	3	427.27143	1278.79246	0.59953	0.00025616	-0.4195	-0.00017924	0.18003	7.6921E-05	427.2712325235539	37.091	1.1654	37.404	36.962	38.127	0.31312					94	28	5	0	0	0	0.85692	2	2966	2953;2966		36.318	7.7409	1	3902400			24103	8368	16243	16253	27649;27650	27650					0.16421630101694973
KTFRIKRFLA	10	Unmodified	_KTFRIKRFLA_					0	0	0		ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.2715759277344	3	427.27143	1278.79246	1.165	0.00049778	-1.0473	-0.00044748	0.11773	5.0302E-05	427.2710411965506	36.949	0.94741	37.435	37.078	38.025	0.48581					74	22	5	0	0	0	0.85441	2	2973	2938;2973		31.634	7.4025	1	4272200			24104	8368	16243	16253	27651;27652	27652					0.16421630101694973
KTFSDFAMQ	9	Unmodified	_KTFSDFAMQ_					0	0	0			REV__ENSG00000139865|ENST00000553443|TTC6	REV__ENSG00000139865|ENST00000553443|TTC6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.7697143554688	2	537.749867	1073.48518	0.2284	0.00012282	-3.6387	-0.0019567	-3.4103	-0.0018339	537.7476948558891	24.932	0.54371	24.604	24.339	24.883	-0.32825					16	11	2	0	0	0	0.20789	1	1244	1244		47.657	5.2612	1	67020	+		24105	19576	16244	16254	27653	27653					-0.04862182562465023
KTFSHKTHLS	10	Unmodified	_KTFSHKTHLS_					0	0	0		nc|ENSG00000274349|Q5TYW1-2|ZNF658;nc|ENSG00000198416|Q4V348|ZNF658B;ENST00000602828.1_9:39444499-39446956:-|nuORF;ENSG00000274349|ENST00000621410|ZNF658;ENST00000377618.4_9:39444499-39464431:-|nuORF	nc|ENSG00000274349|Q5TYW1-2|ZNF658	nc|ENSG00000274349|Q5TYW1-2|ZNF658	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.322021484375	2	593.32238	1184.63021	0.35222	0.00020898	-1.6201	-0.00096125	-1.2679	-0.00075227	593.3214955496583	41.16	1.5019	41.115	40.771	42.273	-0.045467					105	44	3	0	0	0	0.57924	1	2674	2674		51.193	3.2332	1	2608700			24106	8995	16245	16255	27654	27654					0.04527621628903944
KTFWFFFQRHK	11	Unmodified	_KTFWFFFQRHK_					0	0	0		ENSG00000174567|ENST00000308302|GOLT1A	ENSG00000174567|ENST00000308302|GOLT1A	ENSG00000174567|ENST00000308302|GOLT1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.6131591796875	3	524.613856	1570.81974	-1.7178	-0.00090119	-1.3158	-0.00069027	-3.0336	-0.0015915	524.6130947370955	25.634	0.083988	25.634	25.607	25.691	0					5	3	2	0	0	0	0.81892	1	946	946		8.0344	1.7135	1	25163			24107	6946	16246	16256	27655	27655					0.05716113642051823
KTGAIRSH	8	Unmodified	_KTGAIRSH_					0	0	0			REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2513732910156	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.89962	1	7755	7755		38.806	1.7777	1	3292300	+		24108	22616	16247	16257	27656	27656					0.048394536773685104
KTGAIRSH	8	Unmodified	_KTGAIRSH_					0	0	0			REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2520446777344	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87479	1	8216	8216		30.504	0.6621	1	3370400	+		24109	22616	16247	16257	27657	27657					0.048394536773685104
KTGAIRSH	8	Unmodified	_KTGAIRSH_					0	0	0			REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	REV__nc|ENSG00000183605|Q6P4A7-3|SFXN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.252685546875	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87479	1	7874	7874		30.504	1.3541	1	2494100	+		24110	22616	16247	16257	27658	27658					0.048394536773685104
KTGALHSR	8	Unmodified	_KTGALHSR_					0	0	0		ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25189208984375	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.89043	1	7622	7622		35.618	3.6634	1	3292300			24111	7558	16248	16258	27659	27659					0.04839453677379879
KTGALHSR	8	Unmodified	_KTGALHSR_					0	0	0		ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25299072265625	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.86677	2	7451	7406;7451		30.504	3.6795	1	3370400			24112	7558	16248	16258	27660;27661	27661					0.04839453677379879
KTGALHSR	8	Unmodified	_KTGALHSR_					0	0	0		ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2518310546875	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.89962	1	7263	7263		38.806	8.3025	1	712390			24113	7558	16248	16258	27662	27662					0.04839453677379879
KTGALHSR	8	Unmodified	_KTGALHSR_					0	0	0		ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.252197265625	2	435.251226	868.487899	0.18475	8.0413E-05	1.8989	0.0008265	2.0837	0.00090692	435.25121288017317	76.886	2.3553	77.455	76.392	78.747	0.56836					103	62	3	0	0	0	0.89043	2	8876	8839;8876		37.812	6.4687	1	485820			24114	7558	16248	16258	27663;27664	27664					0.04839453677379879
KTGCYKGILPG	11	Unmodified	_KTGCYKGILPG_					0	0	0			REV__nc|ENSG00000118257|O60462-6|NRP2	REV__nc|ENSG00000118257|O60462-6|NRP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.8118286132812	2	568.810259	1135.60597	0.48499	0.00027587	2.2751	0.0012941	2.7601	0.00157	568.8099909257696	58.062	0.64638	58.173	57.918	58.565	0.11027					64	29	3	0	0	0	0.72739	1	4927	4927		27.047	1.4733	1	117580	+		24115	18298	16249	16259	27665	27665					0.04358645151000928
KTGDKLTI	8	Unmodified	_KTGDKLTI_					0	0	0		ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2626953125	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.80514	1	2423	2423		19.104	4.9664	1	3507500			24116	1939	16250	16260	27666	27666					0.07010669040232642
KTGETIIP	8	Unmodified	_KTGETIIP_					0	0	0		nc|ENSG00000163605|Q9NY27-2|PPP4R2	nc|ENSG00000163605|Q9NY27-2|PPP4R2	nc|ENSG00000163605|Q9NY27-2|PPP4R2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.74951171875	2	429.750193	857.485833	0.19062	8.192E-05	-1.2633	-0.00054292	-1.0727	-0.000461	429.7494836550346	40.163	2.386	40.244	39.962	42.348	0.081345					177	71	3	0	0	0	0.92457	1	2542	2542		47.916	5.5195	1	3979000			24117	15049	16251	16261	27667	27667					0.05138980148910832
KTGETIIP	8	Unmodified	_KTGETIIP_					0	0	0		nc|ENSG00000163605|Q9NY27-2|PPP4R2	nc|ENSG00000163605|Q9NY27-2|PPP4R2	nc|ENSG00000163605|Q9NY27-2|PPP4R2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7495422363281	2	429.750193	857.485833	-2.154	-0.00092569	1.0157	0.0004365	-1.1383	-0.00048919	429.75051038702645	40.625	2.1327	41.017	40.832	42.965	0.39209					111	57	2	0	0	0	0.89962	1	3621	3621		38.806	3.1879	1	10174000			24118	15049	16251	16261	27668	27668					0.05138980148910832
KTGICCPRG	9	Unmodified	_KTGICCPRG_					0	0	0			REV__ENSG00000129667|ENST00000675367|RHBDF2	REV__ENSG00000129667|ENST00000675367|RHBDF2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.73321533203125	2	467.733497	933.452441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.233	1	70.264	69.764	70.764	0.030495								0	0	0	0.4027	1	6640	6640		54.776	6.8607	1		+		24119	18829	16252	16262	27669	27669					-0.016946681662943774
KTGIEIRIIRN	11	Unmodified	_KTGIEIRIIRN_					0	0	0		ENST00000471033.5_1_2:197521363-197521654:+|nuORF	ENST00000471033.5_1_2:197521363-197521654:+|nuORF	ENST00000471033.5_1_2:197521363-197521654:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.27294921875	3	438.273499	1311.79867	-0.96188	-0.00042157	0.011679	5.1187E-06	-0.9502	-0.00041645	438.27344423982936	106.61	0.75021	106.61	106.14	106.89	0					48	16	4	0	0	0	0.74022	1	11080	11080		24.232	0.85391	1	872140			24120	12232	16253	16263	27670	27670					0.1552410354256608
KTGIKISE	8	Unmodified	_KTGIKISE_					0	0	0		L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|25|3|sense	L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|25|3|sense	L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|25|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2641296386719	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.7953	1	2923	2923		17.468	0.10304	1	21381000			24121	14524	16254	16264	27671	27671					0.07010669040221273
KTGKPLPFGT	10	Unmodified	_KTGKPLPFGT_					0	0	0		ENST00000588713.1_1_17:33321324-33323247:+|nuORF;nc|ENSG00000005156|P49916-4|LIG3;nc|ENSG00000005156|P49916-3|LIG3;nc|ENSG00000005156|P49916-2|LIG3;ENSG00000005156|ENST00000378526|LIG3	ENST00000588713.1_1_17:33321324-33323247:+|nuORF	ENST00000588713.1_1_17:33321324-33323247:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035888671875	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.86348	1	8643	8643		31.53	1.0262	1	12189000			24122	674	16255	16265	27672	27672					0.0762661985700106
KTGKSLLH	8	Unmodified	_KTGKSLLH_					0	0	0		ENSG00000167104|ENST00000349552|BPIFB6	ENSG00000167104|ENST00000349552|BPIFB6	ENSG00000167104|ENST00000349552|BPIFB6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2411804199219	2	442.271627	882.528701	-0.80012	-0.00035387	0.27016	0.00011948	-0.52996	-0.00023439	442.27172606497606	82.36	1.2316	82.786	82.508	83.739	0.42646					40	29	2	0	0	0	0.4196	1	9515	9515		34.173	0	1	334650			24123	6267	16256	16266	27673	27673					0.08273794997001005
KTGKSSGTA	9	Unmodified	_KTGKSSGTA_					0	0	0		ENST00000564629.1_1_16:31470274-31471003:-|nuORF	ENST00000564629.1_1_16:31470274-31471003:-|nuORF	ENST00000564629.1_1_16:31470274-31471003:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.2970275878906	2	418.727249	835.439946	-1.3038	-0.00054594	-3.7166	-0.0015562	-5.0204	-0.0021022	418.7255351670865	71.43	0.11876	71.506	71.43	71.549	0.076225					6	5	2	0	0	0	0.20789	1	6478	6478		24.519	0	1	30599			24124	13889	16257	16267	27674	27674					0.01564334966678871
KTGLEVSVR	9	Unmodified	_KTGLEVSVR_					0	0	0		ENST00000566493.1_1_15:43280936-43282283:-|nuORF	ENST00000566493.1_1_15:43280936-43282283:-|nuORF	ENST00000566493.1_1_15:43280936-43282283:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7933654785156	2	494.792924	987.571294	-1.0341	-0.00051168	1.0424	0.00051576	0.008238	4.0761E-06	494.7933146843752	26.709	0.78882	26.681	26.36	27.149	-0.027704					34	18	3	0	0	0	0.70638	1	1155	1155		40.058	7.2458	1	107090			24125	13933	16258	16268	27675	27675					0.07701145334578996
KTGLKGIP	8	Unmodified	_KTGLKGIP_					0	0	0		nc|ENSG00000120733|Q7LBC6-2|KDM3B;ENSG00000120733|ENST00000314358|KDM3B	nc|ENSG00000120733|Q7LBC6-2|KDM3B	nc|ENSG00000120733|Q7LBC6-2|KDM3B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.29669189453125	2	407.263271	812.511988	0.76804	0.0003128	2.7514	0.0011206	3.5195	0.0014334	407.2642635357832	38.696	0.78453	38.707	38.317	39.101	0.011177					32	17	2	0	0	0	0.4196	1	2685	2685		17.365	0	1	87981			24126	3150	16259	16269	27676	27676					0.09823294111038194
KTGLLIEV	8	Unmodified	_KTGLLIEV_					0	0	0		ENST00000312465.11_1_4:81209004-81209070:+|nuORF	ENST00000312465.11_1_4:81209004-81209070:+|nuORF	ENST00000312465.11_1_4:81209004-81209070:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7748107910156	2	436.776211	871.537869	-1.136	-0.00049617	-1.8731	-0.00081814	-3.0091	-0.0013143	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.8347	1	8948	8948		23.042	0	1	8774400			24127	9941	16260	16270	27677	27677					0.09696143562666748
KTGLLTPLL	9	Unmodified	_KTGLLTPLL_					0	0	0			REV__ENST00000216181.9_1_22:36677912-36678251:-|nuORF	REV__ENST00000216181.9_1_22:36677912-36678251:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8056335449219	2	478.312961	954.611368	-0.93332	-0.00044642	3.5285	0.0016877	2.5952	0.0012413	478.3143668306478	38.411	0.52364	38.427	38.269	38.792	0.016563					17	14	2	0	0	0	0.20789	1	2279	2279		35.618	5.1146	1	39141	+		24128	24123	16261	16271	27678	27678					0.13224692005132965
KTGNLNLL	8	Unmodified	_KTGNLNLL_					0	0	0			REV__ENSG00000134013|ENST00000389131|LOXL2	REV__ENSG00000134013|ENST00000389131|LOXL2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.77471923828125	2	436.763635	871.512717	1.412	0.00061672	-4.2724	-0.001866	-2.8604	-0.0012493	436.761629701705	90.94	0.35617	90.873	90.562	90.918	-0.067093					10	8	2	0	0	0	0.4196	1	9538	9538		21.96	3.6355	1	172890	+		24129	19110	16262	16272	27679	27679					0.071820887600893
KTGNLNLL	8	Unmodified	_KTGNLNLL_					0	0	0			REV__ENSG00000134013|ENST00000389131|LOXL2	REV__ENSG00000134013|ENST00000389131|LOXL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.77459716796875	2	436.763635	871.512717	0.90225	0.00039407	-3.805	-0.0016619	-2.9027	-0.0012678	436.76123032706727	90.574	0.39767	91.024	90.863	91.261	0.45058					11	9	2	0	0	0	0.4196	1	10717	10717		21.96	0	1	55891	+		24130	19110	16262	16272	27680	27680					0.071820887600893
KTGPGTLARK	10	Unmodified	_KTGPGTLARK_					0	0	0		ENST00000452284.1_1_22:21356738-21362956:+|nuORF;ENST00000436079.1_1_22:21356738-21363657:+|nuORF;ENST00000429962.1_1_22:21356738-21357321:+|nuORF	ENST00000452284.1_1_22:21356738-21362956:+|nuORF	ENST00000452284.1_1_22:21356738-21362956:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.8145141601562	2	514.81419	1027.61383	0.52238	0.00026893	-0.90142	-0.00046406	-0.37904	-0.00019514	514.8137347167254	16.636	0.88589	16.026	15.82	16.706	-0.6107					51	19	5	0	0	0	0.57924	1	171	171		51.193	1.7511	1	3645200			24131	11619	16263	16273	27681	27681					0.1011254046279646
KTGPLLIL	8	Unmodified	_KTGPLLIL_					0	0	0			REV__nc|ENSG00000005189|Q96IC2-2|REXO5	REV__nc|ENSG00000005189|Q96IC2-2|REXO5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3026428222656	2	427.789121	853.56369	0.20756	8.8793E-05	2.5847	0.0011057	2.7923	0.0011945	427.78998402309037	66.168	0.59334	66.721	66.381	66.974	0.5526					18	15	2	0	0	0	0.4196	1	7207	7207		28.254	7.7724	1	87010	+		24132	16079	16264	16274	27682	27682					0.13105037804950825
KTGPLLIL	8	Unmodified	_KTGPLLIL_					0	0	0			REV__nc|ENSG00000005189|Q96IC2-2|REXO5	REV__nc|ENSG00000005189|Q96IC2-2|REXO5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	427.789121	853.56369	0.38522	0.00016479	5.1696	0.0022115	5.5548	0.0023763	427.7922720378188	66.138	0.22514	66.524	66.435	66.66	0.38582	-0.098542	0.00087709	NaN	28.254	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82635	+		24133	16079	16264	16274							0.13105037804950825
KTGPVTLH	8	Unmodified	_KTGPVTLH_					0	0	0		ENSG00000137996|ENST00000370128|RTCA;nc|ENSG00000137996|O00442-2|RTCA	ENSG00000137996|ENST00000370128|RTCA	ENSG00000137996|ENST00000370128|RTCA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.302734375	2	426.750527	851.486502	0.50687	0.00021631	-1.7765	-0.00075811	-1.2696	-0.0005418	426.74958407912806	68.789	1.6606	69.174	68.148	69.808	0.38416					65	39	3	0	0	0	0.4196	1	7460	7460		24.203	0	1	505370			24134	4252	16265	16275	27683	27683					0.054818195886127796
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2774353027344	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.86698	1	8044	8044		28.081	0.19925	1	4644500	+		24135	26848	16266	16276	27684	27684					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2779235839844	2	479.277441	956.540328	-1.0476	-0.00050211	1.2406	0.00059461	0.193	9.2502E-05	479.27794521109934	87.608	3.0549	87.608	87.076	90.13	0					149	70	3	0	0	0	0.86587	1	8348	8348		29.17	3.7199	1	645930	+		24136	26848	16266	16276	27685	27685					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2773132324219	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.86106	3	8105	8025;8105;8243		33.922	4.4677	1	1929800	+		24137	26848	16266	16276	27686;27687;27688	27687					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2773742675781	2	479.277441	956.540328	-0.098244	-4.7086E-05	0.019792	9.4859E-06	-0.078452	-3.76E-05	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.86698	1	8286	8286		28.081	0.19925	1	6799600	+		24138	26848	16266	16276	27689	27689					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2776794433594	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.78666	2	8187	8187;8222		40.058	9.7405	1	2070000	+		24139	26848	16266	16276	27690;27691	27690					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2774658203125	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.86106	1	8764	8764		33.922	6.0394	1	7289200	+		24140	26848	16266	16276	27692	27692					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27801513671875	2	479.277441	956.540328	2.2671	0.0010866	-1.7134	-0.0008212	0.55373	0.00026539	479.2765493533754	97.406	1.666	97.351	96.889	98.555	-0.055542					99	38	4	0	0	0	0.85981	1	10519	10519		35.152	2.3396	1	975730	+		24141	26848	16266	16276	27693	27693					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2775573730469	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.86587	1	8074	8074		29.17	0	1	2046100	+		24142	26848	16266	16276	27694	27694					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773742675781	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.86225	1	8592	8592		32.751	2.2469	1	7040000	+		24143	26848	16266	16276	27695	27695					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2776184082031	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.86225	2	8326	8260;8326		32.751	1.2878	1	7438100	+		24144	26848	16266	16276	27696;27697	27697					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2773742675781	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.76096	2	7996	7848;7996		41.427	7.2541	1	1802300	+		24145	26848	16266	16276	27698;27699	27699					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2778015136719	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.8545	1	7692	7692		36.447	8.5645	1	1785900	+		24146	26848	16266	16276	27700	27700					0.060319920203255606
KTGRLAPGSA	10	Unmodified	_KTGRLAPGSA_					0	0	0			REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	REV__ENST00000448963.5_1_10:91597071-91597797:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774658203125	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.86471	1	8575	8575		30.318	3.2704	1	6441000	+		24147	26848	16266	16276	27701	27701					0.060319920203255606
KTGRLLISH	9	Unmodified	_KTGRLLISH_					0	0	0		ENSG00000083123|ENST00000320393|BCKDHB	ENSG00000083123|ENST00000320393|BCKDHB	ENSG00000083123|ENST00000320393|BCKDHB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.820556640625	2	512.816733	1023.61891	0.32455	0.00016644	2.981	0.0015287	3.3056	0.0016952	512.8162742813993	79.492	0.2567	80.042	79.871	80.128	0.54945					7	5	2	0	0	0	0.20789	1	9120	9120		27.882	15.675	1	29626			24148	1497	16267	16277	27702	27702					0.10804844325434715
KTGSPSSWS	9	Unmodified	_KTGSPSSWS_					0	0	0		ENST00000408923.7_1_5:176795886-176797913:+|nuORF	ENST00000408923.7_1_5:176795886-176797913:+|nuORF	ENST00000408923.7_1_5:176795886-176797913:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.7237243652344	2	468.724707	935.43486	0.4939	0.0002315	-3.488	-0.0016349	-2.9941	-0.0014034	468.72287741489856	69.82	0.72598	69.949	69.77	70.496	0.1291					62	36	2	0	0	0	0.74721	1	6361	6361		37.159	5.2042	1	1036600			24149	11292	16268	16278	27703	27703					-0.03543968895939997
KTHADARH	8	Unmodified	_KTHADARH_					0	0	0			REV__ENST00000369888.5_1_20:62588486-62588768:-|nuORF	REV__ENST00000369888.5_1_20:62588486-62588768:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.2411193847656	2	468.243932	934.473312	-1.1975	-0.00056073	-4.2615	-0.0019954	-5.459	-0.0025561	468.24180543904555	38.577	0.67142	39.099	38.911	39.582	0.52235					30	15	3	0	0	0	0.89962	1	3206	3206		38.806	3.6054	1	1100100	+		24150	25634	16269	16279	27704	27704					0.0034538152922323206
KTHAVILSRPS	11	Unmodified	_KTHAVILSRPS_					0	0	0		ENST00000581546.1_1_17:45917528-45917771:-|nuORF;ENST00000578840.5_1_17:45917528-45918556:-|nuORF;ENST00000580428.1_1_17:45917528-45918633:-|nuORF;nc|ENSG00000141295|Q96FV2-2|SCRN2;ENSG00000141295|ENST00000290216|SCRN2	ENST00000581546.1_1_17:45917528-45917771:-|nuORF	ENST00000581546.1_1_17:45917528-45917771:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.57476806640625	3	403.575178	1207.70371	0.62042	0.00025038	-1.5074	-0.00060836	-0.887	-0.00035797	403.5745077021451	83.731	2.4581	83.662	83.085	85.543	-0.069313					131	56	3	0	0	0	0.67568	1	8570	8570		35.496	1.4091	1	315140			24151	4488	16270	16280	27705	27705					0.10816170071370834
KTHFRWSQK	9	Unmodified	_KTHFRWSQK_					0	0	0			REV__ENSG00000088038|ENST00000221232|CNOT3	REV__ENSG00000088038|ENST00000221232|CNOT3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7845458984375	3	406.556118	1216.64652	1.0703	0.00043515	-0.90393	-0.0003675	0.1664	6.7649E-05	406.5556784855203	34.341	0.76911	34.646	34.366	35.135	0.30494					44	18	4	0	0	0	0.20789	1	2549	2549		37.812	17.781	1	630490	+		24152	16937	16271	16281	27706	27706					0.04686747585651574
KTHKVDLG	8	Unmodified	_KTHKVDLG_					0	0	0		ENSG00000103550|ENST00000219837|KNOP1;ENST00000565844.1_1_16:19721758-19726357:-|nuORF	ENSG00000103550|ENST00000219837|KNOP1	ENSG00000103550|ENST00000219837|KNOP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2586975097656	2	449.261259	896.507966	-1.1655	-0.00052364	-0.32901	-0.00014781	-1.4946	-0.00067145	449.26086608568033	70.705	0.68031	70.776	70.454	71.134	0.071037					61	34	2	0	0	0	0.89043	1	6411	6411		35.618	2.8059	1	315510			24153	2093	16272	16282	27707	27707					0.05557204617332445
KTHLTLHQR	9	Unmodified	_KTHLTLHQR_					0	0	0		ENSG00000146587|ENST00000396912|RBAK	ENSG00000146587|ENST00000396912|RBAK	ENSG00000146587|ENST00000396912|RBAK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3304443359375	2	567.330539	1132.64652	1.5887	0.00090129	-2.6625	-0.0015105	-1.0739	-0.00060923	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.7932	1	9593	9593		16.473	0	1	5459400			24154	4852	16273	16283	27708	27708					0.08550747585650242
KTHLVVLW	8	Unmodified	_KTHLVVLW_					0	0	0		ENSG00000167910|ENST00000301645|CYP7A1	ENSG00000167910|ENST00000301645|CYP7A1	ENSG00000167910|ENST00000301645|CYP7A1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.3067626953125	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.807	1	52.732	52.232	53.232	-0.074509								0	0	0	0.29755	1	4283	4283		24.203	2.5004	1				24155	6340	16274	16284	27709	27709					0.0988724492780193
KTHMIISID	9	Unmodified	_KTHMIISID_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|146|3|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|146|3|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|146|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.261474609375	2	529.289159	1056.56377	-0.17568	-9.2984E-05	-0.72284	-0.00038259	-0.89852	-0.00047557	529.2897695674915	53.491	0.50311	54.105	53.902	54.405	0.61436					23	11	3	0	0	0	0.20789	1	5457	5457		26.693	3.6504	1	348770			24156	14690	16275	16285	27710	27710					0.037746697426428
KTHNGEKVYG	10	Unmodified	_KTHNGEKVYG_					0	0	0		nc|ENSG00000182983|Q6ZS27-2|ZNF662;ENSG00000182983|ENST00000440367|ZNF662;nc|ENSG00000182983|Q6ZS27-3|ZNF662	nc|ENSG00000182983|Q6ZS27-2|ZNF662	nc|ENSG00000182983|Q6ZS27-2|ZNF662	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.7906494140625	2	566.790912	1131.56727	0.69297	0.00039277	-0.72544	-0.00041117	-0.032473	-1.8406E-05	566.790412921783	21.89	0.74046	21.265	20.955	21.695	-0.62558					43	18	3	0	0	0	0.86348	1	843	843		31.53	1.0262	1	497190			24157	7490	16276	16286	27711	27711					0.006750558408384677
KTHNYMETEQ	10	Unmodified	_KTHNYMETEQ_					0	0	0		L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|74|2|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|74|2|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|74|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.2713623046875	3	427.524043	1279.5503	0.49669	0.00021235	-1.5365	-0.00065688	-1.0398	-0.00044453	427.85759267358844	37.387	0.29086	37.7	37.495	37.786	0.31312					9	6	2	0	0	0	0.37624	1	2978	2978		30.569	12.736	1	34939			24158	14674	16277	16287	27712	27712					-0.07829232827270971
KTHPRVTSSK	10	Unmodified	_KTHPRVTSSK_					0	0	0		ENST00000420513.1_1_1:16920174-16921111:-|nuORF	ENST00000420513.1_1_1:16920174-16921111:-|nuORF	ENST00000420513.1_1_1:16920174-16921111:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8248901367188	2	570.827829	1139.64111	-1.0085	-0.00057568	-3.7188	-0.0021228	-4.7273	-0.0026985	570.8254743342769	59.03	1.033	59.422	58.941	59.974	0.39209					57	24	3	0	0	0	0.81117	2	6207	6207;6235		38.754	4.832	1	913650			24159	11454	16278	16288	27713;27714	27713					0.07687024003166698
KTHRPSGT	8	Unmodified	_KTHRPSGT_					0	0	0			REV__ENST00000497964.1_1_1:39924072-39924117:+|nuORF	REV__ENST00000497964.1_1_1:39924072-39924117:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2408447265625	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.87479	1	8185	8185		30.504	0	1	1238700	+		24160	27779	16279	16289	27715	27715					0.021228632976999506
KTHTGKKSYKC	11	Unmodified	_KTHTGKKSYKC_					0	0	0		ENST00000436625.1_1_7:63930096-63930567:+|nuORF	ENST00000436625.1_1_7:63930096-63930567:+|nuORF	ENST00000436625.1_1_7:63930096-63930567:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.302978515625	3	427.564173	1279.67069	0.6057	0.00025898	-3.2873	-0.0014055	-2.6816	-0.0011465	427.56249547708506	66.894	1.0402	67.28	66.697	67.738	0.38515					70	30	3	0	0	0	0.17289	1	7232	7232		34.087	16.92	1	481820			24161	11723	16280	16290	27716	27716					0.0420421995702327
KTHTQDFNF	9	Unmodified	_KTHTQDFNF_					0	0	0			REV__nc|ENSG00000102001|O60840-4|CACNA1F	REV__nc|ENSG00000102001|O60840-4|CACNA1F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.2715454101562	2	569.269813	1136.52507	-0.11869	-6.7568E-05	2.8662	0.0016316	2.7475	0.0015641	569.2712830824312	63.361	0.53594	63.389	63.175	63.711	0.027142					45	24	2	0	0	0	0.71772	1	5958	5958		39.253	0	1	200210	+		24162	17316	16281	16291	27717	27717					-0.03772919567518329
KTHVPLPG	8	Unmodified	_KTHVPLPG_					0	0	0			REV__ENSG00000160194|ENST00000354250|NDUFV3	REV__ENSG00000160194|ENST00000354250|NDUFV3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.7530212402344	2	424.75307	847.491587	0.68659	0.00029163	-1.8987	-0.00080646	-1.2121	-0.00051483	424.75214856371434	66.819	1.0126	67.204	66.547	67.559	0.38515					56	29	3	0	0	0	0.87922	1	7253	7253		31.955	1.4512	1	372660	+		24163	20700	16282	16292	27718	27718					0.06174123451228297
KTHVRIHE	8	Unmodified	_KTHVRIHE_					0	0	0			REV__nc|ENSG00000197362|Q8N393-2|ZNF786	REV__nc|ENSG00000197362|Q8N393-2|ZNF786	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.288818359375	2	510.290882	1018.56721	0.67808	0.00034602	-2.1745	-0.0011096	-1.4964	-0.00076359	510.2897731406001	16.744	0.4302	16.257	16.098	16.528	-0.48718					15	9	3	0	0	0	0.93293	1	180	180		51.335	8.861	1	129030	+		24164	23222	16283	16293	27719	27719					0.05867100631519406
KTHVSLIHRS	10	Unmodified	_KTHVSLIHRS_					0	0	0			REV__ENSG00000067646|ENST00000155093|ZFY;REV__nc|ENSG00000005889|P17010-2|ZFX	REV__nc|ENSG00000005889|P17010-2|ZFX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.341064453125	2	589.343646	1176.67274	0.83312	0.00049099	-2.1148	-0.0012464	-1.2817	-0.00075536	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.86106	1	10205	10205		33.922	9.4024	1	20363000	+		24165	16092;16546	16284	16294	27720	27720					0.09147016757128767
KTIADIIRT	9	Unmodified	_KTIADIIRT_					0	0	0		ENSG00000163468|ENST00000295688|CCT3;ENST00000368256.3_1_1:156302875-156308050:-|nuORF	ENSG00000163468|ENST00000295688|CCT3	ENSG00000163468|ENST00000295688|CCT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8182373046875	2	515.816399	1029.61824	0.86141	0.00044433	-0.24519	-0.00012647	0.61622	0.00031785	515.8159949887275	24.231	0.57643	23.849	23.576	24.153	-0.38178					33	12	4	0	0	0	0.54908	1	1142	1142		49.536	1.8787	1	162000			24166	5801	16285	16295	27721	27721					0.10462004885698661
KTIADIIRT	9	Unmodified	_KTIADIIRT_					0	0	0		ENSG00000163468|ENST00000295688|CCT3;ENST00000368256.3_1_1:156302875-156308050:-|nuORF	ENSG00000163468|ENST00000295688|CCT3	ENSG00000163468|ENST00000295688|CCT3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	515.816399	1029.61824	1.6693	0.00086108	-1.7796	-0.00091794	-0.11023	-5.686E-05	515.8153988367579	24.136	0.73672	23.622	23.408	24.144	-0.51365	-0.11354	-0.00065801	NaN	49.536	43	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197840			24167	5801	16285	16295							0.10462004885698661
KTIDASVSKK	10	Unmodified	_KTIDASVSKK_					0	0	0		nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;ENSG00000171681|ENST00000261168|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF	nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8182373046875	2	538.819138	1075.62372	0.25822	0.00013913	-0.28726	-0.00015478	-0.029038	-1.5646E-05	538.8189412926413	18.022	0.37173	17.54	17.42	17.791	-0.48204					18	7	3	0	0	0	0.28289	1	337	337		74.165	19.389	1	171470			24168	6696	16286	16296	27722	27722					0.08893683677524677
KTIDASVSKK	10	Unmodified	_KTIDASVSKK_					0	0	0		nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;ENSG00000171681|ENST00000261168|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;ENST00000535179.1_1_12:14619386-14628955:+|nuORF	nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8206176757812	2	538.819138	1075.62372	-0.24108	-0.0001299	0.09241	4.9792E-05	-0.14867	-8.0108E-05	538.8191214637967	18.184	0.50387	17.562	17.401	17.905	-0.62141					17	10	2	0	0	0	0.28289	1	362	362		74.165	13.193	1	190110			24169	6696	16286	16296	27723	27723					0.08893683677524677
KTIDVASH	8	Unmodified	_KTIDVASH_					0	0	0			REV__nc|ENSG00000171723|Q9NQX3|GPHN	REV__nc|ENSG00000171723|Q9NQX3|GPHN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7771911621094	2	435.737617	869.460681	-0.10062	-4.3842E-05	0.15845	6.9043E-05	0.057834	2.5201E-05	435.73752036494454	36.192	0.54459	36.173	35.876	36.42	-0.018673					19	11	2	0	0	0	0.4196	1	2265	2265		16.473	0	1	53971	+		24170	21762	16287	16297	27724	27724					0.020729253463287023
KTIETRKELH	10	Unmodified	_KTIETRKELH_					0	0	0		L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|95|2|sense	L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|95|2|sense	L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|95|2|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.29742431640625	3	418.910338	1253.70918	-0.18815	-7.8819E-05	-2.1649	-0.00090688	-2.353	-0.0009857	419.2447502725721	72.586	0.14487	72.623	72.565	72.71	0.037148					6	5	2	0	0	0	0.37624	1	6921	6921		19.263	7.6268	1	59598			24171	14624	16288	16298	27725	27725					0.09247848863174113
KTIFTGHTAI	10	Unmodified	_KTIFTGHTAI_					0	0	0		ENST00000502424.1_1_5:14797477-14798464:-|nuORF	ENST00000502424.1_1_5:14797477-14798464:-|nuORF	ENST00000502424.1_1_5:14797477-14798464:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3042602539062	2	544.808574	1087.60259	-1.6224	-0.0008839	-2.4283	-0.001323	-4.0507	-0.0022069	544.8072830574172	24.958	0.43481	24.958	24.631	25.066	0					27	19	2	0	0	0	0.37624	1	887	887		42.864	10.052	1	37917			24172	12851	16289	16299	27726	27726					0.062297183686723656
KTIGKVSL	8	Unmodified	_KTIGKVSL_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	423.2779235839844	2	423.276378	844.538203	-1.7191	-0.00072767	-1.1062	-0.00046824	-2.8254	-0.0011959	423.27581231120047	111.22	0.72989	111.33	110.9	111.63	0.11118					45	27	3	0	0	0	0.8347	1	11974	11974		23.042	0	1	52965	+		24173	17066	16290	16300	27727	27727					0.10971563282521402
KTIHKELLK	9	Unmodified	_KTIHKELLK_					0	0	0			REV__ENSG00000096433|ENST00000605930|ITPR3	REV__ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.353515625	2	555.355691	1108.69683	-0.86355	-0.00047958	-3.4797	-0.0019325	-4.3433	-0.0024121	555.3536421650435	101.16	2.3681	101.19	100.7	103.07	0.031036					166	56	5	0	0	0	0.78528	1	10756	10756		29.17	1.2878	1	6361400	+		24174	17076	16291	16301	27728	27728					0.14682857190791765
KTIIEKRRPV	10	Unmodified	_KTIIEKRRPV_					0	0	0			REV__nc|ENSG00000125864|Q12934-3|BFSP1	REV__nc|ENSG00000125864|Q12934-3|BFSP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.9326171875	3	413.934706	1238.78229	-1.0065	-0.00041663	-3.7709	-0.0015609	-4.7774	-0.0019775	413.93306098265026	44.954	2.5911	44.923	43.876	46.467	-0.031067					192	60	4	0	0	0	0.85086	1	3581	3581		19.263	0.73163	1	748080	+		24175	18676	16292	16302	27729	27729					0.1724502237643719
KTIIEKRRPV	10	Unmodified	_KTIIEKRRPV_					0	0	0			REV__nc|ENSG00000125864|Q12934-3|BFSP1	REV__nc|ENSG00000125864|Q12934-3|BFSP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.9345397949219	3	413.934706	1238.78229	-1.0131	-0.00041937	-4.2749	-0.0017695	-5.288	-0.0021889	413.9328825406633	41.937	1.6063	42.351	41.752	43.358	0.4139					98	40	4	0	0	0	0.8492	1	3635	3635		18.531	1.3643	1	1509200	+		24176	18676	16292	16302	27730	27730					0.1724502237643719
KTIIEKRRPV	10	Unmodified	_KTIIEKRRPV_					0	0	0			REV__nc|ENSG00000125864|Q12934-3|BFSP1	REV__nc|ENSG00000125864|Q12934-3|BFSP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	413.934706	1238.78229	1.4039	0.00058112	-3.043	-0.0012596	-1.6391	-0.00067847	414.2685461945136	42.163	0.16817	42.167	42.034	42.202	0.0034142	-0.029586	0.00088297	NaN	18.531	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57739	+		24177	18676	16292	16302							0.1724502237643719
KTIIEKRRPV	10	Unmodified	_KTIIEKRRPV_					0	0	0			REV__nc|ENSG00000125864|Q12934-3|BFSP1	REV__nc|ENSG00000125864|Q12934-3|BFSP1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	413.934706	1238.78229	-1.0131	-0.00041937	-4.2749	-0.0017695	-5.288	-0.0021889	413.9328825406633	41.937	1.6063	42.351	41.752	43.358	0.4139	0.15452	-0.00064685	NaN	18.531	98	40	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1509200	+		24178	18676	16292	16302							0.1724502237643719
KTIIEKRRPV	10	Unmodified	_KTIIEKRRPV_					0	0	0			REV__nc|ENSG00000125864|Q12934-3|BFSP1	REV__nc|ENSG00000125864|Q12934-3|BFSP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	413.934706	1238.78229	-1.6079	-0.00066555	-3.4985	-0.0014481	-5.1063	-0.0021137	413.9331535472435	41.437	0.93132	42.071	41.461	42.392	0.6339	-0.12493	0.0003173	NaN	18.531	59	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1492300	+		24179	18676	16292	16302							0.1724502237643719
KTIIPRCVP	9	Unmodified	_KTIIPRCVP_					0	0	0		ENSG00000136643|ENST00000366960|RPS6KC1;nc|ENSG00000136643|Q96S38-2|RPS6KC1	ENSG00000136643|ENST00000366960|RPS6KC1	ENSG00000136643|ENST00000366960|RPS6KC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.7545776367188	2	513.810062	1025.60557	0.015076	7.7463E-06	-1.552	-0.00079742	-1.5369	-0.00078967	513.8090926967785	54.541	0.96747	55.126	54.79	55.758	0.58474					30	22	2	0	0	0	0.20789	1	5638	5638		34.173	16.808	1	155890			24180	4125	16293	16303	27731	27731					0.09379270221802471
KTILPPLPG	9	Unmodified	_KTILPPLPG_					0	0	0		ENST00000373210.3_1_1:36320739-36321132:+|nuORF	ENST00000373210.3_1_1:36320739-36321132:+|nuORF	ENST00000373210.3_1_1:36320739-36321132:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.300048828125	2	468.299853	934.585153	-2.226	-0.0010424	1.9484	0.00091246	-0.27757	-0.00012998	468.30061024502805	38.371	0.76891	38.382	38.08	38.849	0.011173					39	17	3	0	0	0	0.62081	2	2624	2624;2649		45.952	11.709	1	159490			24181	10733	16294	16304	27732;27733	27732					0.11524422833667813
KTILRELKYRI	11	Unmodified	_KTILRELKYRI_					0	0	0		nc|ENSG00000288591|Q9Y2I9|TBC1D30;ENST00000456757.6_1_12:65175002-65212320:+|nuORF	nc|ENSG00000288591|Q9Y2I9|TBC1D30	nc|ENSG00000288591|Q9Y2I9|TBC1D30	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.3018798828125	3	478.304799	1431.89257	0.47684	0.00022808	-4.2941	-0.0020539	-3.8172	-0.0018258	478.3025280059543	66.964	1.0029	67.09	66.677	67.68	0.12649					108	40	3	0	0	0	0.79945	2	5969	5955;5969		11.455	1.8085	1	331170			24182	15334	16295	16305	27734;27735	27735					0.19389822644825472
KTILRELKYRI	11	Unmodified	_KTILRELKYRI_					0	0	0		nc|ENSG00000288591|Q9Y2I9|TBC1D30;ENST00000456757.6_1_12:65175002-65212320:+|nuORF	nc|ENSG00000288591|Q9Y2I9|TBC1D30	nc|ENSG00000288591|Q9Y2I9|TBC1D30	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.6376037597656	3	478.304799	1431.89257	-0.94284	-0.00045096	-3.1255	-0.0014949	-4.0683	-0.0019459	478.63764981735454	66.982	1.088	67.034	66.688	67.776	0.052376					96	41	3	0	0	0	0.78351	1	5956	5956		14.779	1.2709	1	269070			24183	15334	16295	16305	27736	27736					0.19389822644825472
KTILTITVY	9	Unmodified	_KTILTITVY_					0	0	0		ENST00000552029.1_1_12:107380386-107380746:-|nuORF	ENST00000552029.1_1_12:107380386-107380746:-|nuORF	ENST00000552029.1_1_12:107380386-107380746:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.8264770507812	2	526.323525	1050.6325	0.62273	0.00032776	1.3226	0.00069609	1.9453	0.0010239	526.324170537843	60.797	0.86694	60.765	60.141	61.008	-0.032509					44	25	2	0	0	0	0.7932	1	5727	5727		19.36	1.995	1	142490			24184	13674	16296	16306	27737	27737					0.10920657313999982
KTILTITVY	9	Unmodified	_KTILTITVY_					0	0	0		ENST00000552029.1_1_12:107380386-107380746:-|nuORF	ENST00000552029.1_1_12:107380386-107380746:-|nuORF	ENST00000552029.1_1_12:107380386-107380746:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3234252929688	2	526.323525	1050.6325	-0.67072	-0.00035302	3.1177	0.0016409	2.447	0.0012879	526.3250687277414	64.714	3.1276	64.752	62.47	65.598	0.037849					207	130	2	0	0	0	0.7932	1	5490	5490		21.96	1.4781	1	198930			24185	13674	16296	16306	27738	27738					0.10920657313999982
KTINHKIED	9	Unmodified	_KTINHKIED_					0	0	0		ENSG00000180777|ENST00000690538|ANKRD30B;nc|ENSG00000180777|Q9BXX2|ANKRD30B;nc|ENSG00000180777|Q9BXX2-2|ANKRD30B	ENSG00000180777|ENST00000690538|ANKRD30B	ENSG00000180777|ENST00000690538|ANKRD30B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.8302612304688	2	549.301113	1096.58767	-1.7618	-0.00096775	3.0274	0.001663	1.2656	0.0006952	549.3027940169463	43.214	0.53081	43.648	43.336	43.867	0.4334					18	12	2	0	0	0	0.20789	1	3853	3853		56.721	21.52	1	404190			24186	7347	16297	16307	27739	27739					0.04324226500671102
KTIPTKEPEQI	11	Unmodified	_KTIPTKEPEQI_					0	0	0		nc|ENSG00000106772|Q8WUY3-4|PRUNE2;ENSG00000106772|ENST00000376718|PRUNE2;nc|ENSG00000106772|Q8WUY3-2|PRUNE2;nc|ENSG00000106772|Q8WUY3-3|PRUNE2	nc|ENSG00000106772|Q8WUY3-4|PRUNE2	nc|ENSG00000106772|Q8WUY3-4|PRUNE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3633422851562	2	642.36391	1282.71327	2.0845	0.001339	-3.2473	-0.002086	-1.1628	-0.00074696	642.361819653108	110.23	1.6844	110.29	109.66	111.35	0.054062					109	58	2	0	0	0	0.62614	1	13436	13436		41.427	4.9799	1	2848100			24187	2317	16298	16308	27740	27740					0.08321893566221661
KTIQFTKKS	9	Unmodified	_KTIQFTKKS_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8244018554688	2	540.824224	1079.63389	0.58695	0.00031744	-0.090961	-4.9194E-05	0.49599	0.00026824	540.8239609678685	33.21	1.2641	33.421	32.636	33.901	0.21168					46	29	3	0	0	0	0.71772	1	2391	2391		39.253	3.6345	1	1137300	+		24188	21530	16299	16309	27741	27741					0.09726291402762399
KTIQTISFL	9	Unmodified	_KTIQTISFL_					0	0	0		nc|ENSG00000173575|O14647-2|CHD2;ENSG00000173575|ENST00000394196|CHD2;nc|ENSG00000153922|O14646-2|CHD1;ENSG00000153922|ENST00000614616|CHD1	nc|ENSG00000173575|O14647-2|CHD2	nc|ENSG00000173575|O14647-2|CHD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8138427734375	2	525.813325	1049.6121	2.4203	0.0012726	1.7287	0.00090898	4.149	0.0021816	525.8148344392195	106.1	1.1594	106.23	105.62	106.78	0.12742					80	45	3	0	0	0	0.7932	1	12971	12971		24.519	0.31644	1	143960			24189	6870	16300	16310	27742	27742					0.08927486654192762
KTIVPLAP	8	Unmodified	_KTIVPLAP_					0	0	0			REV__ENSG00000176692|ENST00000649859|FOXC2	REV__ENSG00000176692|ENST00000649859|FOXC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7733154296875	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.90465	1	3385	3385		40.573	8.6178	1	10266000	+		24190	22142	16301	16311	27743	27743					0.1071246477083605
KTIVPLAP	8	Unmodified	_KTIVPLAP_					0	0	0			REV__ENSG00000176692|ENST00000649859|FOXC2	REV__ENSG00000176692|ENST00000649859|FOXC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.77471923828125	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.87479	1	3560	3560		30.504	8.8013	1	184570000	+		24191	22142	16301	16311	27744	27744					0.1071246477083605
KTKAGAPIGPS	11	Unmodified	_KTKAGAPIGPS_					0	0	0			REV__ENSG00000215186|ENST00000421285|GOLGA6B	REV__ENSG00000215186|ENST00000421285|GOLGA6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7996826171875	2	513.800749	1025.58694	0.64285	0.0003303	-3.5078	-0.0018023	-2.865	-0.001472	513.7987618527093	16.284	0.27704	15.685	15.555	15.832	-0.59873					10	5	3	0	0	0	0.43778	1	111	111		56.434	10.462	1	106680	+		24192	19623	16302	16312	27745	27745					0.07517431851601941
KTKAGSKS	8	Unmodified	_KTKAGSKS_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|34|1|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|34|1|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.20831298828125	2	403.74016	805.465767	0.59864	0.00024169	-1.2688	-0.00051227	-0.67018	-0.00027058	403.7393756711363	85.818	0.71976	85.966	85.558	86.278	0.14857					22	16	2	0	0	0	0.4196	1	8453	8453		10.265	0	1	80191	+		24193	29634	16303	16313	27746	27746					0.05525229208944893
KTKARARAKQ	10	Unmodified	_KTKARARAKQ_					0	0	0		ENSG00000198932|ENST00000537097|GPRASP1	ENSG00000198932|ENST00000537097|GPRASP1	ENSG00000198932|ENST00000537097|GPRASP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	579.322998046875	2	579.364913	1156.71527	-0.41605	-0.00024105	0.39262	0.00022747	-0.023436	-1.3578E-05	579.365065897449	16.361	0.22998	15.763	15.648	15.878	-0.59873					7	4	2	0	0	0	0.37624	1	133	133		28.081	7.1346	1	89782			24194	8374	16304	16314	27747	27747					0.14318411885346904
KTKATTKP	8	Unmodified	_KTKATTKP_					0	0	0			REV__ENST00000252934.9_1_22:46238891-46238939:+|nuORF	REV__ENST00000252934.9_1_22:46238891-46238939:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7715759277344	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.8347	1	2863	2863		23.042	0	1	13476000	+		24195	24300	16305	16315	27748	27748					0.08654375277114923
KTKEAVSILKH	11	Unmodified	_KTKEAVSILKH_					0	0	0		nc|ENSG00000204644|Q9NU63|ZFP57;nc|ENSG00000204644|Q9NU63-2|ZFP57;ENSG00000204644|ENST00000376883|ZFP57	nc|ENSG00000204644|Q9NU63|ZFP57	nc|ENSG00000204644|Q9NU63|ZFP57	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3909301757812	2	627.382437	1252.75032	2.3057	0.0014466	-2.6415	-0.0016572	-0.33579	-0.00021067	627.3803631374124	110.82	0.68079	110.87	110.56	111.24	0.054062					56	23	3	0	0	0	0.17243	1	13398	13398		32.751	12.754	1	353100			24196	8475	16306	16316	27749	27749					0.1340560990265658
KTKEFEEK	8	Unmodified	_KTKEFEEK_					0	0	0			REV__ENSG00000264424|ENST00000255381|MYH4;REV__ENSG00000109061|ENST00000226207|MYH1	REV__ENSG00000109061|ENST00000226207|MYH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.77685546875	2	519.776939	1037.53933	0.44867	0.00023321	-0.56831	-0.00029539	-0.11964	-6.2184E-05	519.7765910851372	37.868	1.2542	38.181	37.825	39.079	0.31312					91	31	4	0	0	0	0.51714	1	3098	3098		75.043	2.8001	1	9376000	+		24197	17743;23957	16307	16317	27750	27750					0.022057328607616
KTKIIWHG	8	Unmodified	_KTKIIWHG_					0	0	0			REV__nc|ENSG00000177842|Q6ZNG0-2|ZNF620	REV__nc|ENSG00000177842|Q6ZNG0-2|ZNF620	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79827880859375	2	491.795269	981.575986	-0.22794	-0.0001121	1.0719	0.00052718	0.84401	0.00041508	491.795700180553	50.73	2.2718	51.177	50.348	52.62	0.4476					135	54	3	0	0	0	0.884	1	4982	4982		33.516	1.5607	1	1342800	+		24198	22231	16308	16318	27751	27751					0.08446074267988024
KTKILSNSLN	10	Unmodified	_KTKILSNSLN_					0	0	0			REV__ENST00000492351.6_1_4:102029270-102092253:-|nuORF	REV__ENST00000492351.6_1_4:102029270-102092253:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.3336181640625	2	559.332413	1116.65027	0.24055	0.00013455	3.039	0.0016998	3.2796	0.0018344	559.3340611599375	63.586	1.1315	64.14	63.598	64.729	0.5545					46	26	2	0	0	0	0.69342	1	6846	6846		45.022	1.3714	1	1971700	+		24199	27672	16309	16319	27752	27752					0.09661372568848492
KTKIVSGA	8	Unmodified	_KTKIVSGA_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.2518005371094	2	402.252903	802.491253	-1.9383	-0.0007797	0.96529	0.00038829	-0.97305	-0.00039141	402.2532360311715	19.929	0.38907	19.973	19.802	20.191	0.043747					30	18	2	0	0	0	0.85277	1	452	452		25.45	1.2474	1	127490			24200	5333	16310	16320	27753	27753					0.0821070373136763
KTKKALEG	8	Unmodified	_KTKKALEG_					0	0	0		ENSG00000078814|ENST00000262873|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7720642089844	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.7961	2	2356	2237;2356		20.947	0.95016	1	1041500			24201	1407	16311	16321	27754;27755	27755					0.08654375277126292
KTKKCGKS	8	Unmodified	_KTKKCGKS_					0	0	0		nc|ENSG00000171469|Q8N587-2|ZNF561;ENSG00000171469|ENST00000302851|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.2543640136719	2	440.257662	878.500772	-1.5773	-0.00069443	-3.6641	-0.0016132	-5.2414	-0.0023076	440.2558864643056	60.863	0.38903	60.863	60.685	61.074	0					27	17	2	0	0	0	0.7961	1	5355	5355		17.365	3.5896	1	64382			24202	6668	16312	16322	27756	27756					0.05666148745251576
KTKKEKRCV	9	Unmodified	_KTKKEKRCV_					0	0	0			REV__ENST00000529001.5_1_11:118402516-118404307:+|nuORF	REV__ENST00000529001.5_1_11:118402516-118404307:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3403930664062	2	560.336975	1118.6594	1.6683	0.00093481	4.1161	0.0023064	5.7844	0.0032412	560.3391894187363	89.567	3.3537	89.494	86.948	90.302	-0.07238					131	78	3	0	0	0	0.58668	1	9344	9344		47.657	9.8458	1	1075700	+		24203	20182	16313	16323	27757	27757					0.10481442653508566
KTKKHEFK	8	Unmodified	_KTKKHEFK_					0	0	0		ENST00000451962.5_1_7:112594720-112594771:-|nuORF	ENST00000451962.5_1_7:112594720-112594771:-|nuORF	ENST00000451962.5_1_7:112594720-112594771:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3118286132812	2	523.311284	1044.60801	0.27222	0.00014245	-0.57496	-0.00030088	-0.30274	-0.00015843	523.3109007431195	38.199	0.75182	38.541	38.228	38.98	0.34187					37	18	3	0	0	0	0.3822	1	3130	3130		90.37	24.567	1	712480			24204	11910	16314	16324	27758	27758					0.08749441951113113
KTKKKKKK	8	Unmodified	_KTKKKKKK_					0	0	0		ENST00000237654.8_1_4:77969082-77969268:-|nuORF;ENST00000340726.7_1_8:72274331-72274436:-|nuORF;AluYa5_dup1843|chr7:118703762-118704101:-|1.1069971248517176|0.0323474836259334|5.1|63.0|8|2|sense;ENST00000528878.1_1_7:64465174-64465315:-|nuORF;L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|97|2|sense	ENST00000237654.8_1_4:77969082-77969268:-|nuORF	ENST00000237654.8_1_4:77969082-77969268:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8126525878906	2	508.868769	1015.72298	-0.67282	-0.00034238	4.3311	0.002204	3.6583	0.0018616	508.8706244754278	43.662	0.15722	44.113	44.003	44.16	0.45025					5	3	2	0	0	0	0.4196	1	3961	3961		6.7355	0	1	101260			24205	9239	16315	16325	27759	27759					0.21575171152937855
KTKKKKSLSCT	11	Unmodified	_KTKKKKSLSCT_					0	0	0			REV__ENST00000471405.5_1_7:135366313-135386730:-|nuORF	REV__ENST00000471405.5_1_7:135366313-135386730:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.8317260742188	2	626.376297	1250.73804	1.289	0.0008074	0.66428	0.00041609	1.9533	0.0012235	626.8783072097854	54.895	1.3888	54.951	54.526	55.915	0.055611					63	46	2	0	0	0	0.17273	1	4620	4620		25.126	0.6068	1	189230	+		24206	15901	16316	16326	27760	27760					0.12270250167966879
KTKKKKSLSCT	11	Unmodified	_KTKKKKSLSCT_					0	0	0			REV__ENST00000471405.5_1_7:135366313-135386730:-|nuORF	REV__ENST00000471405.5_1_7:135366313-135386730:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	626.376297	1250.73804	0.63373	0.00039695	-1.4738	-0.00092314	-0.84004	-0.00052618	626.3746736587151	54.75	0.2943	55.157	55.075	55.369	0.40663	0.10305	-0.0021059	NaN	14.086	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121880	+		24207	15901	16316	16326							0.12270250167966879
KTKKKRGSYR	10	Unmodified	_KTKKKRGSYR_					0	0	0		ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.384033203125	2	626.385845	1250.75714	-1.2035	-0.00075387	1.7537	0.0010985	0.55016	0.00034461	626.3869467413163	111.36	0.2353	111.34	111.16	111.4	-0.019882					13	8	2	0	0	0	0.37624	1	11874	11874		24.519	0	1	1087000			24208	6169	16317	16327	27761	27761					0.14178967573889167
KTKKLHKLVVK	11	Unmodified	_KTKKLHKLVVK_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78765869140625	3	441.306252	1320.89693	0.20723	9.1453E-05	-3.3323	-0.0014706	-3.1251	-0.0013791	441.30458691859064	41.424	1.3753	41.498	40.904	42.279	0.073418					56	36	2	0	0	0	0.17835	1	2779	2779		21.78	15.779	1	137100	+		24209	23882	16318	16328	27762	27762					0.24931331858374506
KTKKLKKLFSK	11	Unmodified	_KTKKLKKLFSK_					0	0	0		ENSG00000101350|ENST00000375712|KIF3B;nc|ENSG00000101350|O15066-2|KIF3B	ENSG00000101350|ENST00000375712|KIF3B	ENSG00000101350|ENST00000375712|KIF3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2803649902344	3	450.30614	1347.89659	-2.9068	-0.001309	4.2869	0.0019304	1.3801	0.00062147	450.30800972772454	41.438	0.78043	41.851	41.647	42.427	0.4139					38	20	2	0	0	0	0.18034	1	3665	3665		16.53	12.911	1	524210			24210	1936	16319	16329	27763	27763					0.2365591213854259
KTKKLKKLFSK	11	Unmodified	_KTKKLKKLFSK_					0	0	0		ENSG00000101350|ENST00000375712|KIF3B;nc|ENSG00000101350|O15066-2|KIF3B	ENSG00000101350|ENST00000375712|KIF3B	ENSG00000101350|ENST00000375712|KIF3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2819519042969	3	450.30614	1347.89659	-1.5521	-0.00069894	3.1483	0.0014177	1.5961	0.00071875	450.3074543525421	41.321	1.054	41.954	41.532	42.586	0.6339					55	28	3	0	0	0	0.18068	1	3659	3659		11.455	6.8113	1	677130			24211	1936	16319	16329	27764	27764					0.2365591213854259
KTKKNGGF	8	Unmodified	_KTKKNGGF_					0	0	0		nc|ENSG00000177302|Q13472-3|TOP3A;nc|ENSG00000177302|Q13472-2|TOP3A;ENSG00000177302|ENST00000321105|TOP3A;ENST00000477508.1_1_17:18183848-18186112:-|nuORF	nc|ENSG00000177302|Q13472-3|TOP3A	nc|ENSG00000177302|Q13472-3|TOP3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2551574707031	2	440.255977	878.497401	-1.4879	-0.00065508	-0.26291	-0.00011575	-1.7509	-0.00077082	440.2558124081508	66.549	0.68278	66.682	66.36	67.042	0.13326					60	29	3	0	0	0	0.85277	1	5931	5931		25.45	3.7478	1	243800			24212	7132	16320	16330	27765	27765					0.05329221962904285
KTKKVGHA	8	Unmodified	_KTKKVGHA_					0	0	0		nc|ENSG00000007952|Q9Y5S8-3|NOX1	nc|ENSG00000007952|Q9Y5S8-3|NOX1	nc|ENSG00000007952|Q9Y5S8-3|NOX1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801513671875	2	434.771794	867.529036	-0.007915	-3.4412E-06	-3.4377	-0.0014946	-3.4456	-0.001498	434.7701976485958	36.962	0.1838	36.902	36.738	36.922	-0.060333					6	4	2	0	0	0	0.4196	1	2067	2067		33.516	8.0654	1	49304			24213	14735	16321	16331	27766	27766					0.08997214716839608
KTKKVKKKCF	10	Unmodified	_KTKKVKKKCF_					0	0	0		ENSG00000204767|ENST00000377365|INSYN2B	ENSG00000204767|ENST00000377365|INSYN2B	ENSG00000204767|ENST00000377365|INSYN2B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2686767578125	3	413.265288	1236.77403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.022	1	40.981	40.481	41.481	-0.04081								0	0	0	0.45132	1	3056	3056		25.126	9.7929	1				24214	8487	16322	16332	27767	27767					0.16511752135488678
KTKLGGKAPLP	11	Unmodified	_KTKLGGKAPLP_					0	0	0		ENST00000586500.1_1_19:13993617-13994323:-|nuORF;nc|ENSG00000132016|Q0VDD7-2|BRME1;ENSG00000132016|ENST00000586783|BRME1	ENST00000586500.1_1_19:13993617-13994323:-|nuORF	ENST00000586500.1_1_19:13993617-13994323:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.3531494140625	2	555.355691	1108.69683	-0.45068	-0.00025029	-3.7051	-0.0020576	-4.1558	-0.0023079	555.3535032243398	101.3	2.2254	101.3	100.77	103	0					164	54	4	0	0	0	0.72106	1	10358	10358		28.081	2.5074	1	2945100			24215	3760	16323	16333	27768	27768					0.14682857190791765
KTKLGSRTTYQ	11	Unmodified	_KTKLGSRTTYQ_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.860595703125	2	641.859326	1281.7041	-0.052066	-3.3419E-05	-0.555	-0.00035623	-0.60707	-0.00038965	641.8586484820704	118.5	0.48003	118.42	118.21	118.69	-0.07531					44	17	3	0	0	0	0.69995	1	12715	12715		31.53	1.2121	1	700550			24216	7038	16324	16334	27769	27769					0.07451545000549231
KTKMDQADD	9	Oxidation (M)	_KTKM(Oxidation (M))DQADD_		KTKM(1)DQADD		KTKM(44)DQADD	0	0	1		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	534.2361450195312	2	534.237321	1066.46009	-0.12482	-6.6684E-05	-2.8544	-0.0015249	-2.9792	-0.0015916	534.2356152777932	27.696	0.50257	27.764	27.502	28.004	0.06868					53	25	3	0	0	0	0.65578	1	1116	1116		43.651	9.4782	1	133370			24217	4382	16325	16335	27770	27770		76			-0.07048282155687957
KTKNFIQKN	9	Unmodified	_KTKNFIQKN_					0	0	0		ENSG00000108256|ENST00000225388|NUFIP2	ENSG00000108256|ENST00000225388|NUFIP2	ENSG00000108256|ENST00000225388|NUFIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8261108398438	2	560.827298	1119.64004	-1.0474	-0.00058741	-0.85113	-0.00047734	-1.8985	-0.0010647	560.8265219498778	50.913	0.64624	50.911	50.705	51.351	-0.0020447					51	20	3	0	0	0	0.78983	1	4319	4319		27.882	1.1893	1	533400			24218	2396	16326	16336	27771	27771					0.08500809634256257
KTKNFIQKN	9	Unmodified	_KTKNFIQKN_					0	0	0		ENSG00000108256|ENST00000225388|NUFIP2	ENSG00000108256|ENST00000225388|NUFIP2	ENSG00000108256|ENST00000225388|NUFIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8270263671875	2	560.827298	1119.64004	-0.09953	-5.5819E-05	-1.8691	-0.0010482	-1.9686	-0.0011041	560.8260922946897	50.931	0.59262	50.839	50.585	51.178	-0.091797					43	16	3	0	0	0	0.78058	1	4019	4019		30.504	1.3541	1	1039600			24219	2396	16326	16336	27772	27772					0.08500809634256257
KTKPIVFEV	9	Unmodified	_KTKPIVFEV_					0	0	0		nc|ENSG00000054523|O60333-2|KIF1B;ENSG00000054523|ENST00000676179|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8206176757812	2	530.823692	1059.63283	-0.07706	-4.0905E-05	-3.7072	-0.0019679	-3.7842	-0.0020088	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.7932	1	7611	7611		25.45	2.4077	1	1032800			24220	1020	16327	16337	27773	27773					0.10540077033851958
KTKQRKVVPPE	11	Unmodified	_KTKQRKVVPPE_					0	0	0			REV__nc|ENSG00000058272|O14974-4|PPP1R12A	REV__nc|ENSG00000058272|O14974-4|PPP1R12A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26776123046875	3	437.269866	1308.78777	-1.5693	-0.00068621	-3.1658	-0.0013843	-4.7351	-0.0020705	437.2683683670783	53.718	2.085	53.765	52.872	54.957	0.047806					225	71	5	0	0	0	0.72892	1	4422	4422		26.75	4.1881	1	2544700	+		24221	16435	16328	16338	27774	27774					0.14572701168253843
KTKSLSLG	8	Unmodified	_KTKSLSLG_					0	0	0			REV__nc|ENSG00000244731|P0C0L4-2|C4A	REV__nc|ENSG00000244731|P0C0L4-2|C4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.25701904296875	2	417.258185	832.501818	0.52563	0.00021932	-0.071237	-2.9724E-05	0.45439	0.0001896	417.2580621570988	22.515	2.686	21.904	21.633	24.319	-0.6107					140	63	3	0	0	0	0.82136	1	1062	1062		14.137	1.1779	1	2260100	+		24222	23731	16329	16339	27775	27775					0.07886686385813846
KTKSSVVK	8	Unmodified	_KTKSSVVK_					0	0	0			REV__nc|ENSG00000165732|Q9NR30-2|DDX21	REV__nc|ENSG00000165732|Q9NR30-2|DDX21	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26348876953125	2	438.779285	875.544017	0.28166	0.00012359	-2.6943	-0.0011822	-2.4127	-0.0010586	438.7785588641784	34.975	0.34327	35.223	35.015	35.359	0.24769					13	8	2	0	0	0	0.4196	1	2617	2617		37.159	1.5408	1	433810	+		24223	21212	16330	16340	27776	27776					0.1012666179418602
KTKTKKPGT	9	Unmodified	_KTKTKKPGT_					0	0	0		ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.31268310546875	2	494.811116	987.60768	-0.073772	-3.6503E-05	3.3768	0.0016709	3.303	0.0016344	494.81248076616197	108.78	0.78468	108.73	108.35	109.14	-0.049324					63	32	2	0	0	0	0.7932	1	11865	11865		23.523	5.1983	1	858000			24224	3743	16331	16341	27777	27777					0.11338022231268496
KTKTKSAS	8	Unmodified	_KTKTKSAS_					0	0	0			REV__nc|ENSG00000276293|P78356-2|PIP4K2B	REV__nc|ENSG00000276293|P78356-2|PIP4K2B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.245849609375	2	425.753267	849.491981	1.1433	0.00048677	-2.401	-0.0010222	-1.2576	-0.00053545	425.7521754819196	88.451	1.0166	88.377	88.073	89.089	-0.074005					39	24	2	0	0	0	0.4196	1	9152	9152		15.642	9.3292	1	152200	+		24225	24019	16332	16342	27778	27778					0.06121498380412049
KTKTRSRSR	9	Unmodified	_KTKTRSRSR_					0	0	0		ENSG00000100941|ENST00000216832|PNN	ENSG00000100941|ENST00000216832|PNN	ENSG00000100941|ENST00000216832|PNN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.342529296875	2	560.338895	1118.66324	3.1454	0.0017625	-0.57084	-0.00031986	2.5746	0.0014426	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.7932	1	12921	12921		18.262	0	1	151040			24226	1888	16333	16343	27779	27779					0.10865248471600353
KTLAEHKELIN	11	Unmodified	_KTLAEHKELIN_					0	0	0		ENSG00000129595|ENST00000261486|EPB41L4A;ENST00000305368.8_1_5:111600591-111754802:-|nuORF	ENSG00000129595|ENST00000261486|EPB41L4A	ENSG00000129595|ENST00000261486|EPB41L4A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.59765625	3	432.58211	1294.7245	2.7171	0.0011754	-1.3871	-0.00060002	1.33	0.00057534	432.5812310914684	106.63	0.48125	106.59	106.45	106.93	-0.034134					17	10	2	0	0	0	0.17275	1	11804	11804		14.243	4.1394	1	60635			24227	3596	16334	16344	27780	27780					0.08892715660385875
KTLAELPE	8	Unmodified	_KTLAELPE_					0	0	0		nc|ENSG00000162971|A2RUC4-2|TYW5;ENST00000452512.6_1_2:200797792-200820219:-|nuORF;ENSG00000162971|ENST00000354611|TYW5	nc|ENSG00000162971|A2RUC4-2|TYW5	nc|ENSG00000162971|A2RUC4-2|TYW5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7544860839844	2	450.755475	899.496398	-0.14159	-6.3823E-05	-2.8357	-0.0012782	-2.9773	-0.001342	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.88601	1	7804	7804		34.173	0.65696	1	109620			24228	5755	16335	16345	27781	27781					0.042629628033296285
KTLAKALEMYK	11	Unmodified	_KTLAKALEMYK_					0	0	0		chr3:47662592-47675475|39|14.36|0.51|4.82|-|0|SMARCC1,SMARCC1|1	chr3:47662592-47675475|39|14.36|0.51|4.82|-|0|SMARCC1,SMARCC1|1	chr3:47662592-47675475|39|14.36|0.51|4.82|-|0|SMARCC1,SMARCC1|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.59771728515625	3	432.584574	1294.73189	-1.5745	-0.00068109	0.9561	0.00041359	-0.61837	-0.0002675	432.5860807104286	106.55	0.13434	106.7	106.6	106.74	0.14843					4	2	2	0	0	0	0.17382	1	11402	11402		7.0192	0	1	18294			24229	403	16336	16346	27782	27782					0.09631731936428878
KTLFIKRFV	9	Unmodified	_KTLFIKRFV_					0	0	0		ENST00000608790.5_1_13:52793747-52803539:-|nuORF;ENST00000606973.5_1_13:52796699-52803539:-|nuORF	ENST00000608790.5_1_13:52793747-52803539:-|nuORF	ENST00000608790.5_1_13:52793747-52803539:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3685302734375	2	576.368601	1150.72265	-2.5571	-0.0014738	1.6995	0.00097954	-0.85763	-0.00049431	576.3693880247914	40.386	2.6783	40.778	38.947	41.625	0.39209					154	68	5	0	0	0	0.77244	2	3452	3442;3452		32.812	2.5316	1	8015200			24230	14454	16337	16347	27783;27784	27784					0.153317514330638
KTLFIKRFV	9	Unmodified	_KTLFIKRFV_					0	0	0		ENST00000608790.5_1_13:52793747-52803539:-|nuORF;ENST00000606973.5_1_13:52796699-52803539:-|nuORF	ENST00000608790.5_1_13:52793747-52803539:-|nuORF	ENST00000608790.5_1_13:52793747-52803539:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3695068359375	2	576.368601	1150.72265	-0.38703	-0.00022307	1.819	0.0010484	1.432	0.00082536	576.369487649421	37.688	1.7157	38.174	37.83	39.546	0.48581					111	42	4	0	0	0	0.7932	1	3064	3064		23.042	0	1	1850300			24231	14454	16337	16347	27785	27785					0.153317514330638
KTLFNGLVRTP	11	Unmodified	_KTLFNGLVRTP_					0	0	0			REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7368469238281	3	415.915312	1244.72411	0.27299	0.00011354	-0.10521	-4.3756E-05	0.16779	6.9785E-05	415.91541184789094	38.369	0.5587	38.711	38.379	38.938	0.34187					38	13	4	0	0	0	0.17301	1	3181	3181		42.243	13.666	1	1107500	+		24232	20406	16338	16348	27786	27786					0.11153340731175376
KTLHLELRP	9	Unmodified	_KTLHLELRP_					0	0	0			REV__ENST00000299613.10_1_11:9596239-9596734:+|nuORF	REV__ENST00000299613.10_1_11:9596239-9596734:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.836669921875	2	553.837665	1105.66078	0.070572	3.9085E-05	-0.047926	-2.6543E-05	0.022646	1.2542E-05	553.8375431100607	18.844	0.38328	18.215	18.06	18.444	-0.6296					19	8	3	0	0	0	0.51307	1	445	445		51.335	7.2187	1	153940	+		24233	24741	16339	16349	27787	27787					0.11217400013924816
KTLHLELRP	9	Unmodified	_KTLHLELRP_					0	0	0			REV__ENST00000299613.10_1_11:9596239-9596734:+|nuORF	REV__ENST00000299613.10_1_11:9596239-9596734:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	553.837665	1105.66078	0.070572	3.9085E-05	-0.047926	-2.6543E-05	0.022646	1.2542E-05	553.8375431100607	18.844	0.38328	18.215	18.06	18.444	-0.6296	-0.011095	0.00027808	NaN	51.335	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153940	+		24234	24741	16339	16349							0.11217400013924816
KTLHLIRPW	9	Unmodified	_KTLHLIRPW_					0	0	0			REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|48|2|sense	REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|48|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533935546875	2	582.356025	1162.6975	0.16989	9.8934E-05	-4.3258	-0.0025192	-4.1559	-0.0024202	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.7932	1	12773	12773		20.947	0	1	635410	+		24235	29489	16340	16350	27788	27788					0.12265696630515777
KTLIHLCR	8	Unmodified	_KTLIHLCR_					0	0	0			REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.30035400390625	2	492.294579	982.574605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.488	1	59.488	58.988	59.988	0								0	0	0	0.3055	1	5176	5176		44.117	1.2525	1		+		24236	20615	16341	16351	27789	27789					0.08262116907587824
KTLIVSKQN	9	Unmodified	_KTLIVSKQN_					0	0	0			REV__ENSG00000197584|ENST00000452583|KCNMB2	REV__ENSG00000197584|ENST00000452583|KCNMB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8162841796875	2	515.816399	1029.61824	0.86141	0.00044433	-0.24519	-0.00012647	0.61622	0.00031785	515.8159949887275	24.231	0.57643	23.849	23.576	24.153	-0.38178					33	12	4	0	0	0	0.75725	1	1154	1154		36.447	2.5251	1	162000	+		24237	23248	16342	16352	27790	27790					0.10462004885698661
KTLKEELPM	9	Unmodified	_KTLKEELPM_					0	0	0			REV__ENSG00000203880|ENST00000308824|PCMTD2	REV__ENSG00000203880|ENST00000308824|PCMTD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.8043212890625	2	544.804642	1087.59473	0.026613	1.4499E-05	3.3995	0.0018521	3.4261	0.0018666	544.8064273929182	24.934	1.2168	24.992	24.613	25.83	0.058189					124	57	4	0	0	0	0.7932	1	920	920		23.042	1.3567	1	915340	+		24238	23445	16343	16353	27791	27791					0.05443823056862129
KTLKRGYF	8	Unmodified	_KTLKRGYF_					0	0	0		ENSG00000174839|ENST00000311128|DENND6A;ENST00000487662.1_1_3:57643405-57651906:-|nuORF	ENSG00000174839|ENST00000311128|DENND6A	ENSG00000174839|ENST00000311128|DENND6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.79925537109375	2	506.800552	1011.58655	-0.566	-0.00028685	1.7071	0.00086518	1.1411	0.00057833	506.80135816429055	49.177	1.8282	49.153	47.938	49.766	-0.024033					72	41	2	0	0	0	0.89494	1	4083	4083		37.159	5.2042	1	127540			24239	6967	16344	16354	27792	27792					0.08122056922422871
KTLKWHLA	8	Unmodified	_KTLKWHLA_					0	0	0			REV__ENSG00000204116|ENST00000373502|CHIC1	REV__ENSG00000204116|ENST00000373502|CHIC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.8034973144531	2	498.803094	995.591636	-1.4653	-0.00073091	2.6111	0.0013024	1.1457	0.00057149	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.89494	1	4425	4425		37.159	1.9584	1	2964600	+		24240	23458	16345	16355	27793	27793					0.09366360785020333
KTLLEGSK	8	Unmodified	_KTLLEGSK_					0	0	0			REV__ENSG00000073734|ENST00000650372|ABCB11	REV__ENSG00000073734|ENST00000650372|ABCB11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2735290527344	2	438.263468	874.512382	1.2093	0.00052998	-1.3268	-0.00058151	-0.11757	-5.1529E-05	438.26276536180046	47.112	0.74757	47.108	46.637	47.384	-0.0041618					26	18	2	0	0	0	0.4196	1	3821	3821		19.997	0	1	73813	+		24241	16678	16346	16356	27794	27794					0.07010669040232642
KTLLPFNK	8	Unmodified	_KTLLPFNK_					0	0	0			REV__ENSG00000139287|ENST00000333850|TPH2	REV__ENSG00000139287|ENST00000333850|TPH2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2432861328125	2	480.797478	959.580402	0.30131	0.00014487	-0.57129	-0.00027467	-0.26998	-0.00012981	480.79668378990607	33.056	0.33622	33.268	33.061	33.397	0.21168					12	7	2	0	0	0	0.4196	1	2354	2354		29.15	7.1897	1	82329	+		24242	19530	16347	16357	27795	27795					0.0989953869089959
KTLLPRTPIE	10	Unmodified	_KTLLPRTPIE_					0	0	0			REV__ENSG00000099812|ENST00000215582|MISP	REV__ENSG00000099812|ENST00000215582|MISP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	584.3571166992188	2	584.358431	1166.70231	-0.42255	-0.00024692	-3.1642	-0.001849	-3.5868	-0.002096	584.3564465061169	92.917	2.7194	92.917	91.633	94.352	0					122	62	2	0	0	0	0.86272	1	9124	9124		24.519	0.99649	1	314890	+		24243	17105	16348	16358	27796	27796					0.12562535982624468
KTLLQLQK	8	Unmodified	_KTLLQLQK_					0	0	0			REV__ENST00000456674.1_1_2:11448506-11449064:+|nuORF	REV__ENST00000456674.1_1_2:11448506-11449064:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.3148193359375	2	486.316035	970.617516	0.52122	0.00025348	-0.67123	-0.00032643	-0.15001	-7.2953E-05	486.31556932624306	29.087	0.90394	28.914	28.631	29.535	-0.17336					52	20	4	0	0	0	0.81485	1	1845	1845		62.107	0	1	1161500	+		24244	26959	16349	16359	27797	27797					0.13103210236647556
KTLMFIFL	8	Unmodified	_KTLMFIFL_					0	0	0			REV__ENST00000476806.5_1_20:34292652-34293208:-|nuORF	REV__ENST00000476806.5_1_20:34292652-34293208:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.2928161621094	2	506.798632	1011.58271	1.0717	0.00054314	-3.1493	-0.0015961	-2.0776	-0.0010529	507.29684189061624	18.187	0.45869	17.566	17.308	17.767	-0.62141					12	9	2	0	0	0	0.4196	1	327	327		24.203	0	1	87517	+		24245	27343	16350	16360	27798	27798					0.07738251104353822
KTLNKLLEVLA	11	Unmodified	_KTLNKLLEVLA_					0	0	0			REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3928833007812	2	621.395013	1240.77547	-0.28805	-0.00017899	-2.2869	-0.0014211	-2.575	-0.0016001	621.3935317040346	107.46	1.2706	107.43	106.55	107.82	-0.034401					61	29	4	0	0	0	0.72739	1	11652	11652		27.047	3.5246	1	478940	+		24246	20158	16351	16361	27799	27799					0.16471664705250078
KTLNKLLEVLA	11	Unmodified	_KTLNKLLEVLA_					0	0	0			REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	621.395013	1240.77547	-0.0792	-4.9215E-05	-3.3572	-0.0020861	-3.4364	-0.0021354	621.3928058082562	107.78	0.51279	107.78	107.32	107.83	0	0.050474	1.431E-05	NaN	27.047	31	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2165700	+		24247	20158	16351	16361							0.16471664705250078
KTLNKLLEVLA	11	Unmodified	_KTLNKLLEVLA_					0	0	0			REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	621.395013	1240.77547	2.9779	0.0018504	-5.9084	-0.0036714	-2.9305	-0.001821	621.3912526346866	107.85	1.1723	107.82	106.71	107.88	-0.031487	0.097026	-0.0031563	NaN	27.047	72	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1002900	+		24248	20158	16351	16361							0.16471664705250078
KTLNKLLEVLA	11	Unmodified	_KTLNKLLEVLA_					0	0	0			REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	621.395013	1240.77547	0.69657	0.00043285	-4.2325	-0.0026301	-3.536	-0.0021972	621.8938411981298	107.88	1.1694	107.91	106.76	107.93	0.035622	0.18749	-0.0010735	NaN	27.047	49	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1344300	+		24249	20158	16351	16361							0.16471664705250078
KTLNKLLEVLA	11	Unmodified	_KTLNKLLEVLA_					0	0	0			REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	621.395013	1240.77547	1.2997	0.00080766	-5.0985	-0.0031682	-3.7988	-0.0023605	621.3916872453874	107.75	1.01	107.88	107.02	108.03	0.13867	0.15868	-0.0021498	NaN	27.047	64	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1287300	+		24250	20158	16351	16361							0.16471664705250078
KTLPGLDRLH	10	Unmodified	_KTLPGLDRLH_					0	0	0			REV__ENSG00000267467|ENST00000592954|APOC4	REV__ENSG00000267467|ENST00000592954|APOC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.33984375	2	575.340572	1148.66659	-0.77132	-0.00044377	0.66457	0.00038235	-0.10675	-6.1418E-05	575.3408323014936	39.083	0.98392	39.053	38.538	39.522	-0.03027					45	22	3	0	0	0	0.42897	1	2703	2703		61.691	5.2575	1	230080	+		24251	23968	16352	16362	27800	27800					0.09820498525596122
KTLPVPGL	8	Unmodified	_KTLPVPGL_					0	0	0			REV__ENSG00000088038|ENST00000221232|CNOT3	REV__ENSG00000088038|ENST00000221232|CNOT3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2674560546875	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.86288	1	3181	3181		26.796	5.0938	1	681490	+		24252	16937	16353	16363	27801	27801					0.09792178253815109
KTLPVPGL	8	Unmodified	_KTLPVPGL_					0	0	0			REV__ENSG00000088038|ENST00000221232|CNOT3	REV__ENSG00000088038|ENST00000221232|CNOT3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7671813964844	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.787	1	42.758	42.258	43.258	-0.029461								0	0	0	0.30004	1	3219	3219		21.702	0	1		+		24253	16937	16353	16363	27802	27802					0.09792178253815109
KTLPYFIRNK	10	Unmodified	_KTLPYFIRNK_					0	0	0		nc|ENSG00000169180|Q96QU8-2|XPO6;ENSG00000169180|ENST00000304658|XPO6	nc|ENSG00000169180|Q96QU8-2|XPO6	nc|ENSG00000169180|Q96QU8-2|XPO6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.271484375	3	427.255557	1278.74484	1.1303	0.00048292	0.12441	5.3155E-05	1.2547	0.00053607	427.2556082313027	36.997	0.5046	37.482	37.242	37.747	0.4858					24	11	3	0	0	0	0.37624	1	2960	2960		47.96	29.428	1	163700			24254	6476	16354	16364	27803	27803					0.11661931110825208
KTLRGRRRSH	10	Unmodified	_KTLRGRRRSH_					0	0	0			REV__ENSG00000130255|ENST00000347512|RPL36	REV__ENSG00000130255|ENST00000347512|RPL36	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.228271484375	3	422.925316	1265.75412	1.7061	0.00072154	2.2872	0.0009673	3.9932	0.0016888	422.92627227954415	55.373	1.0313	55.404	55.118	56.15	0.030838					39	25	2	0	0	0	0.37624	1	5063	5063		8.4073	0	1	168880	+		24255	18861	16355	16365	27804	27804					0.13187137239742697
KTLRSQHLLVD	11	Unmodified	_KTLRSQHLLVD_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.25482177734375	3	437.257738	1308.75138	-1.0127	-0.0004428	0.097666	4.2705E-05	-0.91501	-0.00040009	437.25769841228777	99.435	2.9287	99.435	98.234	101.16	0					165	70	3	0	0	0	0.75779	1	10132	10132		20.315	1.0523	1	385900	+		24256	23882	16356	16366	27805	27805					0.10935824271541605
KTLSTPTK	8	Unmodified	_KTLSTPTK_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26263427734375	2	438.263468	874.512382	-1.8646	-0.00081717	1.0768	0.00047194	-0.78773	-0.00034523	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.87792	1	2827	2827		31.53	1.6883	1	3384400	+		24257	19767	16357	16367	27806	27806					0.07010669040221273
KTLSTPTK	8	Unmodified	_KTLSTPTK_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26214599609375	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.8537	1	2833	2833		25.574	4.6271	1	2361100	+		24258	19767	16357	16367	27807	27807					0.07010669040221273
KTLSTPTK	8	Unmodified	_KTLSTPTK_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.26324462890625	2	438.263468	874.512382	1.5783	0.00069171	-2.4144	-0.0010581	-0.83609	-0.00036643	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.83831	1	2725	2725		23.523	1.5628	1	92475000	+		24259	19767	16357	16367	27808	27808					0.07010669040221273
KTLTVWLP	8	Unmodified	_KTLTVWLP_					0	0	0			REV__ENSG00000164303|ENST00000296741|ENPP6	REV__ENSG00000164303|ENST00000296741|ENPP6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2772521972656	2	479.292028	956.569503	0.71956	0.00034488	-1.159	-0.00055549	-0.43942	-0.00021061	479.29169577988534	84.102	0.86417	84.033	83.246	84.11	-0.069313					21	19	2	0	0	0	0.4196	1	8502	8502		27.882	0	1	49187	+		24260	21063	16358	16368	27809	27809					0.0894813631659872
KTLVLVAP	8	Unmodified	_KTLVLVAP_					0	0	0			REV__ENST00000478666.5_1_3:75471877-75472048:-|nuORF	REV__ENST00000478666.5_1_3:75471877-75472048:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.7815246582031	2	420.781296	839.54804	-0.11189	-4.7082E-05	3.7407	0.001574	3.6288	0.0015269	420.782706169146	36.147	2.1489	36.129	35.556	37.705	-0.018677					81	47	3	0	0	0	0.884	1	2273	2273		33.516	1.5607	1	101430	+		24261	27386	16359	16369	27810	27810					0.1218475128788441
KTLVYCTGF	9	Unmodified	_KTLVYCTGF_					0	0	0			REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2424926757812	2	516.265153	1030.51575	0.12603	6.5066E-05	3.8021	0.0019629	3.9282	0.002028	516.26678871435	32.199	0.68622	32.325	31.86	32.546	0.12642					23	15	2	0	0	0	0.20789	1	2234	2234		34.173	9.6685	1	137730	+		24262	15561	16360	16370	27811	27811					0.0017159582259864692
KTLVYCTGF	9	Unmodified	_KTLVYCTGF_					0	0	0			REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	516.265153	1030.51575	0.17403	8.9848E-05	4.5033	0.0023249	4.6773	0.0024147	516.2645331000989	32.289	0.77894	32.3	31.673	32.452	0.010899	-0.021451	0.0010112	NaN	34.173	33	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24180	+		24263	15561	16360	16370							0.0017159582259864692
KTMLVTVLN	9	Unmodified	_KTMLVTVLN_					0	0	0		ENST00000566986.1_1_17:80251923-80252148:+|nuORF	ENST00000566986.1_1_17:80251923-80252148:+|nuORF	ENST00000566986.1_1_17:80251923-80252148:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80352783203125	2	509.801903	1017.58925	-0.054506	-2.7787E-05	3.6278	0.0018495	3.5733	0.0018217	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.77244	1	8400	8400		32.812	1.2826	1	828920			24264	13943	16361	16371	27812	27812					0.08116144265056846
KTMLVTVLN	9	Unmodified	_KTMLVTVLN_					0	0	0		ENST00000566986.1_1_17:80251923-80252148:+|nuORF	ENST00000566986.1_1_17:80251923-80252148:+|nuORF	ENST00000566986.1_1_17:80251923-80252148:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.80389404296875	2	509.801903	1017.58925	1.253	0.0006388	2.312	0.0011787	3.5651	0.0018175	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.7932	1	8855	8855		23.523	0.94304	1	3243500			24265	13943	16361	16371	27813	27813					0.08116144265056846
KTMLVTVLN	9	Unmodified	_KTMLVTVLN_					0	0	0		ENST00000566986.1_1_17:80251923-80252148:+|nuORF	ENST00000566986.1_1_17:80251923-80252148:+|nuORF	ENST00000566986.1_1_17:80251923-80252148:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8043518066406	2	509.801903	1017.58925	0.68681	0.00035014	2.8448	0.0014503	3.5316	0.0018004	509.80326235241614	86.403	4.313	86.552	84.994	89.307	0.14902					345	101	5	0	0	0	0.78124	1	8385	8385		30.318	8.3578	1	3017600			24266	13943	16361	16371	27814	27814					0.08116144265056846
KTMYIKICK	9	Unmodified	_KTMYIKICK_					0	0	0		ENST00000558663.5_1_15:99768880-99791424:-|nuORF	ENST00000558663.5_1_15:99768880-99791424:-|nuORF	ENST00000558663.5_1_15:99768880-99791424:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.3187866210938	2	564.319405	1126.62426	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.143	1	55.104	54.604	55.604	-0.039188								0	0	0	0.31828	1	4605	4605		24.203	2.5004	1				24267	13792	16362	16372	27815	27815					0.06601063801349483
KTNAIISLK	9	Unmodified	_KTNAIISLK_					0	0	0		ENST00000539028.1_1_12:10010098-10010200:-|nuORF	ENST00000539028.1_1_12:10010098-10010200:-|nuORF	ENST00000539028.1_1_12:10010098-10010200:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.3134460449219	2	494.313492	986.612431	0.17117	8.4609E-05	-0.39231	-0.00019392	-0.22114	-0.00010931	494.31315315762487	34.223	0.70489	34.433	34.149	34.854	0.21003					42	16	4	0	0	0	0.035861	2	2516	2516;2529		114.86	26.681	1	1501200			24268	13475	16363	16373	27816;27817	27816					0.11858906374050093
KTNAIISLK	9	Unmodified	_KTNAIISLK_					0	0	0		ENST00000539028.1_1_12:10010098-10010200:-|nuORF	ENST00000539028.1_1_12:10010098-10010200:-|nuORF	ENST00000539028.1_1_12:10010098-10010200:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.3131408691406	2	494.313492	986.612431	0.9681	0.00047854	-1.2895	-0.00063741	-0.32139	-0.00015887	494.31272326897897	34.231	0.86031	34.536	34.2	35.06	0.30494					50	20	4	0	0	0	0.026876	2	2546	2535;2546		120.31	13.298	1	1573200			24269	13475	16363	16373	27818;27819	27819					0.11858906374050093
KTNGKRGL	8	Unmodified	_KTNGKRGL_					0	0	0			REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26556396484375	2	437.266876	872.519199	-2.1128	-0.00092385	-0.58974	-0.00025787	-2.7025	-0.0011817	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.84341	1	820	820		24.203	0	1	1366900	+		24270	27309	16364	16374	27820	27820					0.0778402671146523
KTNGKRGL	8	Unmodified	_KTNGKRGL_					0	0	0			REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2655334472656	2	437.266876	872.519199	0.72217	0.00031578	-3.1375	-0.0013719	-2.4154	-0.0010562	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.92394	1	676	676		47.657	12.039	1	944940	+		24271	27309	16364	16374	27821	27821					0.0778402671146523
KTNGKRGL	8	Unmodified	_KTNGKRGL_					0	0	0			REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2655029296875	2	437.266876	872.519199	0.61137	0.00026733	-3.2	-0.0013992	-2.5886	-0.0011319	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.90465	1	829	829		40.573	1.7665	1	1313200	+		24272	27309	16364	16374	27822	27822					0.0778402671146523
KTNGKRGL	8	Unmodified	_KTNGKRGL_					0	0	0			REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2655334472656	2	437.266876	872.519199	-0.37471	-0.00016385	-2.2126	-0.0009675	-2.5873	-0.0011313	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.90983	1	800	800		42.396	14.142	1	970200	+		24273	27309	16364	16374	27823	27823					0.0778402671146523
KTNGKRGL	8	Unmodified	_KTNGKRGL_					0	0	0			REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.265625	2	437.266876	872.519199	-0.36504	-0.00015962	-2.3712	-0.0010368	-2.7362	-0.0011965	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.87064	2	964	964;994		29.15	6.1071	1	1300600	+		24274	27309	16364	16374	27824;27825	27824					0.0778402671146523
KTNGKRGL	8	Unmodified	_KTNGKRGL_					0	0	0			REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2662048339844	2	437.266876	872.519199	1.7622	0.00077054	-4.3406	-0.001898	-2.5785	-0.0011275	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.81897	1	1003	1003		20.947	5.3107	1	1079000	+		24275	27309	16364	16374	27826	27826					0.0778402671146523
KTNGKRGL	8	Unmodified	_KTNGKRGL_					0	0	0			REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2655334472656	2	437.266876	872.519199	0.27465	0.0001201	-3.2994	-0.0014427	-3.0248	-0.0013226	437.2655143696572	24.107	1.3602	23.725	23.153	24.514	-0.38178					100	30	5	0	0	0	0.89043	1	1211	1211		35.618	5.7767	1	12963000	+		24276	27309	16364	16374	27827	27827					0.0778402671146523
KTNGKRGL	8	Unmodified	_KTNGKRGL_					0	0	0			REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26495361328125	2	437.266876	872.519199	0.051124	2.2355E-05	-3.1793	-0.0013902	-3.1282	-0.0013678	437.26563820123806	25.538	2.1653	25.281	24.501	26.666	-0.25721					170	48	6	0	0	0	0.86677	1	1247	1247		27.882	4.8398	1	21512000	+		24277	27309	16364	16374	27828	27828					0.0778402671146523
KTNGKRGL	8	Unmodified	_KTNGKRGL_					0	0	0			REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	REV__ENST00000474760.1_1_6:105609928-105627738:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2654724121094	2	437.266876	872.519199	-0.77238	-0.00033773	-1.5811	-0.00069138	-2.3535	-0.0010291	437.26614393764254	27.409	1.8866	27.234	26.703	28.59	-0.17559					105	43	3	0	0	0	0.86677	1	1549	1549		27.882	3.6795	1	457600	+		24278	27309	16364	16374	27829	27829					0.0778402671146523
KTNKNGAK	8	Unmodified	_KTNKNGAK_					0	0	0		ENST00000556830.1_1_12:57559409-57560120:+|nuORF	ENST00000556830.1_1_12:57559409-57560120:+|nuORF	ENST00000556830.1_1_12:57559409-57560120:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.95928955078125	2	430.751059	859.487565	-1.1321	-0.00048766	1.3237	0.00057018	0.19158	8.2524E-05	430.7491860995371	40.219	0.53976	40.808	40.473	41.013	0.58915					20	13	3	0	0	0	0.4196	1	3381	3381		10.866	0	1	215360			24279	13755	16365	16375	27830	27830					0.052200339575165344
KTNKRKWNRWI	11	Unmodified	_KTNKRKWNRWI_					0	0	0			REV__nc|ENSG00000157193|Q14114-2|LRP8	REV__nc|ENSG00000157193|Q14114-2|LRP8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.6338806152344	3	510.631909	1528.8739	4.1352	0.0021116	2.4886	0.0012707	6.6238	0.0033823	510.96644639342924	104.18	2.2061	104.41	103.8	106.01	0.22783					165	53	5	0	0	0	0.84494	1	12756	12756		6.3209	0.31984	1	454800	+		24280	20533	16366	16376	27831	27831					0.1306170579364334
KTNLERCP	8	Unmodified	_KTNLERCP_					0	0	0		ENSG00000166439|ENST00000299563|RNF169	ENSG00000166439|ENST00000299563|RNF169	ENSG00000166439|ENST00000299563|RNF169	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.7457580566406	2	480.750201	959.48585	0.11514	5.5353E-05	-4.2185	-0.0020281	-4.1034	-0.0019727	480.7485774338056	32.415	0.37289	32.426	32.191	32.564	0.010902					16	10	2	0	0	0	0.87792	1	1817	1817		31.53	3.6476	1	35174			24281	6197	16367	16377	27832	27832					0.004486568772449573
KTNLLHIKKE	10	Unmodified	_KTNLLHIKKE_					0	0	0			REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.353271484375	2	612.377155	1222.73976	1.0617	0.00065014	1.8011	0.001103	2.8628	0.0017531	612.8789284223816	44.497	0.21076	44.506	44.422	44.632	0.0084534					5	4	2	0	0	0	0.37624	1	3130	3130		44.377	21.798	1	26167	+		24282	16754	16368	16378	27833	27833					0.1372962724824447
KTNLLHIKKE	10	Unmodified	_KTNLLHIKKE_					0	0	0			REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	612.377155	1222.73976	-0.05839	-3.5756E-05	3.5059	0.0021469	3.4475	0.0021112	612.379284160186	44.308	0.93656	44.285	43.852	44.788	-0.023079	-0.16833	-0.00065916	NaN	44.377	30	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56976	+		24283	16754	16368	16378							0.1372962724824447
KTNLLHIKKE	10	Unmodified	_KTNLLHIKKE_					0	0	0			REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	612.377155	1222.73976	-0.66808	-0.00040912	4.684	0.0028684	4.016	0.0024593	612.8812726497304	44.585	0.56833	44.551	44.226	44.794	-0.03347	0.098106	0.00078376	NaN	44.377	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33040	+		24284	16754	16368	16378							0.1372962724824447
KTNLLHIKKE	10	Unmodified	_KTNLLHIKKE_					0	0	0			REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	612.377155	1222.73976	-1.0905	-0.0006678	4.7284	0.0028956	3.6379	0.0022278	612.379899797189	44.464	0.41508	44.46	44.201	44.616	-0.0041618	0.0065676	0.00083809	NaN	44.377	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43786	+		24285	16754	16368	16378							0.1372962724824447
KTNLLHIKKE	10	Unmodified	_KTNLLHIKKE_					0	0	0			REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	612.377155	1222.73976	0.29758	0.00018223	4.7655	0.0029183	5.0631	0.0031005	612.881495892302	44.522	0.36393	44.464	44.242	44.606	-0.058262	0.010858	0.00088357	NaN	44.377	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107160	+		24286	16754	16368	16378							0.1372962724824447
KTNLSDNSVY	10	Unmodified	_KTNLSDNSVY_					0	0	0			REV__ENST00000471654.1_1_2:23914526-23929531:+|nuORF	REV__ENST00000471654.1_1_2:23914526-23929531:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.781982421875	2	570.78021	1139.54587	1.1603	0.00066225	-1.0197	-0.000582	0.1406	8.0251E-05	570.7794700070763	24.905	0.78845	24.868	24.536	25.325	-0.037178					40	18	3	0	0	0	0.76096	1	980	980		41.427	7.2541	1	146700	+		24287	18376	16369	16379	27834	27834					-0.018323739785273574
KTNLTFCA	8	Unmodified	_KTNLTFCA_					0	0	0		ENST00000260247.9_1_11:102937240-102937294:-|nuORF	ENST00000260247.9_1_11:102937240-102937294:-|nuORF	ENST00000260247.9_1_11:102937240-102937294:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2326354980469	2	449.228571	896.442588	0.59617	0.00026782	3.8501	0.0017296	4.4462	0.0019974	449.2302610410389	83.151	3.4859	83.298	82.027	85.513	0.14694					178	80	3	0	0	0	0.88601	1	8100	8100		34.173	0.65696	1	225870			24288	9382	16370	16380	27835	27835					-0.0097753290002629
KTNPSRIRIAL	11	Unmodified	_KTNPSRIRIAL_					0	0	0		ENSG00000136098|ENST00000610828|NEK3	ENSG00000136098|ENST00000610828|NEK3	ENSG00000136098|ENST00000610828|NEK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.89306640625	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.75921	1	11406	11406		19.997	0.6368	1	66671000			24289	4085	16371	16381	27836	27836					0.14927834371087556
KTNPVGLCL	9	Unmodified	_KTNPVGLCL_					0	0	0		ENST00000565644.5_1_16:87866020-87866083:-|nuORF	ENST00000565644.5_1_16:87866020-87866083:-|nuORF	ENST00000565644.5_1_16:87866020-87866083:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.766845703125	2	472.76532	943.516088	0.74188	0.00035074	3.3813	0.0015986	4.1232	0.0019493	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.76764	1	8480	8480		34.173	2.2177	1	547170			24290	13919	16372	16382	27837	27837					0.04207015542431236
KTNRKRLH	8	Unmodified	_KTNRKRLH_					0	0	0			REV__ENSG00000106546|ENST00000242057|AHR	REV__ENSG00000106546|ENST00000242057|AHR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.807861328125	2	526.825424	1051.63629	1.9318	0.0010177	-4.2665	-0.0022477	-2.3347	-0.00123	526.8228549049687	99.202	0.50438	99.565	99.251	99.755	0.36292					19	12	2	0	0	0	0.4196	1	12006	12006		71.296	14.575	1	291840	+		24291	17617	16373	16383	27838	27838					0.11254184651079413
KTNRKRLH	8	Unmodified	_KTNRKRLH_					0	0	0			REV__ENSG00000106546|ENST00000242057|AHR	REV__ENSG00000106546|ENST00000242057|AHR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8082885742188	2	526.825424	1051.63629	2.504	0.0013192	-0.84704	-0.00044624	1.657	0.00087295	526.82304722444	100.75	0.3222	101.1	100.98	101.3	0.34591					11	7	2	0	0	0	0.4196	1	12246	12246		79.451	28.116	1	126870	+		24292	17617	16373	16383	27839	27839					0.11254184651079413
KTPAAPAKKTS	11	Unmodified	_KTPAAPAKKTS_					0	0	0		ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3276977539062	2	550.327131	1098.63971	-1.4511	-0.00079856	1.2412	0.00068307	-0.20986	-0.00011549	550.3279242402356	100.07	1.1382	100.24	99.716	100.85	0.17199					63	25	3	0	0	0	0.67778	1	10444	10444		35.152	7.2698	1	345000			24293	796	16374	16384	27840	27840					0.09433389914420331
KTPALVILG	9	Unmodified	_KTPALVILG_					0	0	0		ENST00000426528.5_1_X:102139368-102152590:+|nuORF	ENST00000426528.5_1_X:102139368-102152590:+|nuORF	ENST00000426528.5_1_X:102139368-102152590:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30108642578125	2	456.299853	910.585153	0.18552	8.4654E-05	2.8375	0.0012948	3.0231	0.0013794	456.3010022539405	33.29	1.7406	33.257	32.935	34.675	-0.032681					212	75	4	0	0	0	0.7932	1	1573	1573		25.574	2.5316	1	1700700			24294	11554	16375	16385	27841	27841					0.1262842283366581
KTPDRPKKLL	10	Unmodified	_KTPDRPKKLL_					0	0	0			REV__nc|ENSG00000073712|Q96AC1-2|FERMT2	REV__nc|ENSG00000073712|Q96AC1-2|FERMT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.2818603515625	2	598.379697	1194.74484	0.84906	0.00050806	2.4755	0.0014813	3.3245	0.0019893	598.3811527333417	41.719	0.40815	41.724	41.619	42.027	0.0043983					15	9	2	0	0	0	0.37624	1	2757	2757		20.947	4.2295	1	106580	+		24295	16677	16376	16386	27842	27842					0.15525931110846614
KTPDRPKKLL	10	Unmodified	_KTPDRPKKLL_					0	0	0			REV__nc|ENSG00000073712|Q96AC1-2|FERMT2	REV__nc|ENSG00000073712|Q96AC1-2|FERMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	598.8809814453125	2	598.379697	1194.74484	0.35601	0.00021303	2.8174	0.0016859	3.1735	0.0018989	598.3813089320432	40.572	1.0575	40.654	40.231	41.288	0.081345					56	37	2	0	0	0	0.8651	1	2591	2591		25.574	2.9944	1	302330	+		24296	16677	16376	16386	27843	27843					0.15525931110846614
KTPEEHEL	8	Unmodified	_KTPEEHEL_					0	0	0		nc|ENSG00000163349|Q86Z02-4|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;ENSG00000163349|ENST00000426820|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7962341308594	2	491.745639	981.476725	-0.2155	-0.00010597	-3.693	-0.001816	-3.9085	-0.001922	491.74364424330776	52.55	0.53957	53.164	52.95	53.49	0.61436					21	12	2	0	0	0	0.4196	1	5318	5318		32.812	3.6629	1	184980			24297	5785	16377	16387	27844	27844					-0.014754132074358495
KTPFVARSL	9	Unmodified	_KTPFVARSL_					0	0	0		nc|ENSG00000111913|Q9Y4F9|RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2	nc|ENSG00000111913|Q9Y4F9|RIPOR2	nc|ENSG00000111913|Q9Y4F9|RIPOR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8036804199219	2	509.805834	1017.59712	-1.4574	-0.000743	-2.7703	-0.0014123	-4.2277	-0.0021553	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.7932	1	8224	8224		23.523	0	1	920080			24298	2625	16378	16388	27845	27845					0.08902039576844345
KTPGLKQP	8	Unmodified	_KTPGLKQP_					0	0	0			REV__ENST00000268182.9_1_15:91044979-91045129:+|nuORF	REV__ENST00000268182.9_1_15:91044979-91045129:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7802429199219	2	434.766178	867.517802	-0.093058	-4.0458E-05	3.1336	0.0013624	3.0406	0.0013219	434.767281450244	34.361	0.2449	34.357	34.174	34.419	-0.0047417					7	5	2	0	0	0	0.4196	1	2047	2047		34.173	0	1	11573	+		24299	24514	16379	16389	27846	27846					0.07874392622704818
KTPGLKQPLA	10	Unmodified	_KTPGLKQPLA_					0	0	0			REV__ENST00000268182.9_1_15:91044979-91045129:+|nuORF	REV__ENST00000268182.9_1_15:91044979-91045129:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3217163085938	2	526.826766	1051.63898	0.50512	0.00026611	-0.74667	-0.00039337	-0.24155	-0.00012725	526.8261887963708	64.852	0.37312	64.976	64.799	65.172	0.12397					17	12	2	0	0	0	0.37624	1	5767	5767		30.318	20.052	1	72048	+		24300	24514	16380	16390	27847	27847					0.11522595265364544
KTPGPIVI	8	Unmodified	_KTPGPIVI_					0	0	0		ENSG00000155890|ENST00000286349|TRIM42	ENSG00000155890|ENST00000286349|TRIM42	ENSG00000155890|ENST00000286349|TRIM42	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7669677734375	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.84341	1	2900	2900		24.203	2.5004	1	681490			24301	5348	16381	16391	27848	27848					0.09792178253792372
KTPGPIVI	8	Unmodified	_KTPGPIVI_					0	0	0		ENSG00000155890|ENST00000286349|TRIM42	ENSG00000155890|ENST00000286349|TRIM42	ENSG00000155890|ENST00000286349|TRIM42	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76702880859375	2	412.765646	823.516739	-0.80567	-0.00033255	3.6306	0.0014986	2.8249	0.001166	412.76743574244557	48.894	3.0852	48.869	47.646	50.731	-0.025112					171	74	4	0	0	0	0.90465	1	4141	4141		40.573	7.057	1	642490			24302	5348	16381	16391	27849	27849					0.09792178253792372
KTPGPIVI	8	Unmodified	_KTPGPIVI_					0	0	0		ENSG00000155890|ENST00000286349|TRIM42	ENSG00000155890|ENST00000286349|TRIM42	ENSG00000155890|ENST00000286349|TRIM42	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7667541503906	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.80706	2	2712	2712;2862		35.201	5.3592	1	818920			24303	5348	16381	16391	27850;27851	27850					0.09792178253792372
KTPGPIVI	8	Unmodified	_KTPGPIVI_					0	0	0		ENSG00000155890|ENST00000286349|TRIM42	ENSG00000155890|ENST00000286349|TRIM42	ENSG00000155890|ENST00000286349|TRIM42	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7669677734375	2	412.765646	823.516739	-0.52852	-0.00021815	2.9286	0.0012088	2.4001	0.00099068	412.76723094642836	48.755	3.2946	48.662	47.534	50.828	-0.093178					192	86	3	0	0	0	0.86288	1	3735	3735		26.796	5.0938	1	594400			24304	5348	16381	16391	27852	27852					0.09792178253792372
KTPHVGAR	8	Unmodified	_KTPHVGAR_					0	0	0			REV__ENST00000334512.9_1_10:81073174-81073993:+|nuORF	REV__ENST00000334512.9_1_10:81073174-81073993:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5977478027344	2	433.253769	864.492984	-1.5591	-0.00067547	3.4633	0.0015005	1.9042	0.000825	433.25608106819277	107.03	1.2892	107.16	106.64	107.93	0.13866					139	31	6	0	0	0	0.4196	1	11437	11437		3.1592	0	1	127480000	+		24305	25156	16382	16392	27853	27853					0.05531757539984028
KTPIIRHF	8	Unmodified	_KTPIIRHF_					0	0	0			REV__ENSG00000180479|ENST00000451802|ZNF571	REV__ENSG00000180479|ENST00000451802|ZNF571	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.2972412109375	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.621	1	52.618	52.118	53.118	-0.0033035								0	0	0	0.29871	1	4561	4561		23.042	2.5607	1		+		24306	22400	16383	16393	27854	27854					0.09765763159327889
KTPIIRHF	8	Unmodified	_KTPIIRHF_					0	0	0			REV__ENSG00000180479|ENST00000451802|ZNF571	REV__ENSG00000180479|ENST00000451802|ZNF571	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3105773925781	2	506.308544	1010.60253	0.46799	0.00023695	0.70005	0.00035444	1.168	0.00059138	506.3090292156969	63.021	1.2614	63.143	62.591	63.852	0.12252					86	56	2	0	0	0	0.87276	1	5476	5476		29.842	4.3914	1	130540	+		24307	22400	16383	16393	27855	27855					0.09765763159327889
KTPIIRHF	8	Unmodified	_KTPIIRHF_					0	0	0			REV__ENSG00000180479|ENST00000451802|ZNF571	REV__ENSG00000180479|ENST00000451802|ZNF571	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3091735839844	2	506.308544	1010.60253	-0.11528	-5.8369E-05	1.0679	0.00054071	0.95266	0.00048234	506.30895339856204	46.446	1.9227	46.367	45.268	47.19	-0.079002					66	54	2	0	0	0	0.89962	1	3410	3410		38.806	0	1	167080	+		24308	22400	16383	16393	27856	27856					0.09765763159327889
KTPIQAGGY	9	Unmodified	_KTPIQAGGY_					0	0	0		ENST00000497784.1_2_7:140434399-140508041:-|nuORF;ENSG00000157764|ENST00000646891|BRAF;ENST00000479537.5_1_7:140434399-140447180:-|nuORF;ENST00000445336.2_1_X:74804463-74804925:+|nuORF	ENST00000497784.1_2_7:140434399-140508041:-|nuORF	ENST00000497784.1_2_7:140434399-140508041:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7378234863281	2	467.753267	933.491981	0.20426	9.5543E-05	1.8093	0.00084629	2.0135	0.00094184	467.75299833012303	54.312	0.88287	54.719	54.403	55.286	0.40663					44	20	3	0	0	0	0.20789	1	5545	5545		39.253	8.7492	1	1257600			24309	5447	16384	16394	27857	27857					0.022574983804247495
KTPITLFRMA	10	Unmodified	_KTPITLFRMA_					0	0	0		nc|ENSG00000144152|Q53RD9-4|FBLN7;nc|ENSG00000144152|Q53RD9-3|FBLN7;nc|ENSG00000144152|Q53RD9-2|FBLN7;ENSG00000144152|ENST00000331203|FBLN7	nc|ENSG00000144152|Q53RD9-4|FBLN7	nc|ENSG00000144152|Q53RD9-4|FBLN7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.343017578125	2	589.341726	1176.6689	-0.3676	-0.00021664	2.4536	0.001446	2.086	0.0012294	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.86763	1	9702	9702		26.693	2.1737	1	11103000			24310	4694	16385	16395	27858	27858					0.08763210939059718
KTPITLFRMA	10	Unmodified	_KTPITLFRMA_					0	0	0		nc|ENSG00000144152|Q53RD9-4|FBLN7;nc|ENSG00000144152|Q53RD9-3|FBLN7;nc|ENSG00000144152|Q53RD9-2|FBLN7;ENSG00000144152|ENST00000331203|FBLN7	nc|ENSG00000144152|Q53RD9-4|FBLN7	nc|ENSG00000144152|Q53RD9-4|FBLN7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.343017578125	2	589.341726	1176.6689	2.472	0.0014569	-0.53238	-0.00031375	1.9396	0.0011431	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.86763	1	10387	10387		26.693	4.733	1	16740000			24311	4694	16385	16395	27859	27859					0.08763210939059718
KTPKILSHF	9	Unmodified	_KTPKILSHF_					0	0	0		nc|ENSG00000101311|Q9BQL6-4|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.8218994140625	2	535.821484	1069.62842	-0.057962	-3.1058E-05	1.7	0.0009109	1.642	0.00087984	535.8222119662299	50.981	1.0017	51.015	50.55	51.551	0.034584					65	29	3	0	0	0	0.76255	1	4035	4035		35.618	12.576	1	232670			24312	14821	16386	16396	27860	27860					0.09638612610933706
KTPLTLLP	8	Unmodified	_KTPLTLLP_					0	0	0			REV__ENSG00000148357|ENST00000683500|HMCN2	REV__ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7874755859375	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.82658	1	3440	3440		21.96	1.4781	1	325400	+		24313	20112	16387	16397	27861	27861					0.11308733942325944
KTPMALTLL	9	Unmodified	_KTPMALTLL_					0	0	0		ENST00000530028.2_2_15:49171086-49171392:+|nuORF	ENST00000530028.2_2_15:49171086-49171392:+|nuORF	ENST00000530028.2_2_15:49171086-49171392:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.30108642578125	2	494.298996	986.583439	-0.82421	-0.00040741	4.4506	0.0021999	3.6264	0.0017925	494.3011394049625	97.613	4.008	97.613	96.986	100.99	0					359	95	6	0	0	0	0.71772	1	9844	9844		39.253	3.6345	1	29815000			24314	13338	16388	16398	27862	27862					0.08961045753392227
KTPNLLPPLGL	11	Unmodified	_KTPNLLPPLGL_					0	0	0		nc|ENSG00000205578|A6NF01|POM121B	nc|ENSG00000205578|A6NF01|POM121B	nc|ENSG00000205578|A6NF01|POM121B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8662109375	2	581.863349	1161.71214	-1.0297	-0.00059916	-4.2573	-0.0024772	-5.2871	-0.0030763	582.3633706302797	78.693	0.21203	79.104	79.014	79.226	0.4106					6	4	2	0	0	0	0.1725	1	8984	8984		14.865	0	1	32235			24315	15220	16389	16399	27863	27863					0.13775723987987476
KTPPNRGGG	9	Unmodified	_KTPPNRGGG_					0	0	0			REV__ENST00000608501.5_1_2:91816838-91843483:-|nuORF	REV__ENST00000608501.5_1_2:91816838-91843483:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.24072265625	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.76255	1	7803	7803		35.618	1.4457	1	1219900	+		24316	29397	16390	16400	27864	27864					0.02122863297722688
KTPPSQPPG	9	Unmodified	_KTPPSQPPG_					0	0	0		ENSG00000113805|ENST00000263665|CNTN3	ENSG00000113805|ENST00000263665|CNTN3	ENSG00000113805|ENST00000263665|CNTN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	454.74493408203125	2	454.745442	907.476331	-1.1674	-0.00053087	-0.044215	-2.0106E-05	-1.2116	-0.00055098	454.7453088336953	103.87	1.2348	104.04	103.57	104.81	0.17095					57	30	3	0	0	0	0.7932	1	11013	11013		19.997	2.6318	1	408010			24317	2746	16391	16401	27865	27865					0.01889211863374385
KTPQMLLW	8	Unmodified	_KTPQMLLW_					0	0	0			REV__ENST00000394456.9_1_19:6389626-6392898:-|nuORF	REV__ENST00000394456.9_1_19:6389626-6392898:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.3180847167969	2	508.783513	1015.55247	-0.78886	-0.00040136	2.1894	0.001114	1.4006	0.00071259	509.2858529634631	47.127	0.39094	47.598	47.344	47.735	0.47139					10	8	2	0	0	0	0.4196	1	4453	4453		26.693	0	1	130550	+		24318	26080	16392	16402	27866	27866					0.045318924391494875
KTPQMLLW	8	Unmodified	_KTPQMLLW_					0	0	0			REV__ENST00000394456.9_1_19:6389626-6392898:-|nuORF	REV__ENST00000394456.9_1_19:6389626-6392898:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	508.783513	1015.55247	-0.27609	-0.00014047	0.93541	0.00047592	0.65932	0.00033545	509.2849543873283	46.911	0.21928	47.834	47.739	47.958	0.92315	0.11773	-0.00097035	NaN	19.997	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139470	+		24319	26080	16392	16402							0.045318924391494875
KTPQVLLI	8	Unmodified	_KTPQVLLI_					0	0	0			REV__ENSG00000100632|ENST00000557016|ERH	REV__ENSG00000100632|ENST00000557016|ERH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3008728027344	2	456.299853	910.585153	0.060695	2.7695E-05	2.8141	0.0012841	2.8748	0.0013118	456.3009104320022	48.176	2.3719	48.166	47.652	50.024	-0.0093269					99	60	3	0	0	0	0.85277	1	3947	3947		25.45	1.2474	1	293790	+		24320	17210	16393	16403	27867	27867					0.1262842283365444
KTPQVLLI	8	Unmodified	_KTPQVLLI_					0	0	0			REV__ENSG00000100632|ENST00000557016|ERH	REV__ENSG00000100632|ENST00000557016|ERH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30029296875	2	456.299853	910.585153	-0.038834	-1.772E-05	2.5899	0.0011818	2.551	0.001164	456.300922389136	51.424	1.8969	51.422	50.771	52.668	-0.0020447					87	49	2	0	0	0	0.87922	1	4373	4373		31.955	6.5047	1	84869	+		24321	17210	16393	16403	27868	27868					0.1262842283365444
KTPRKGLDS	9	Unmodified	_KTPRKGLDS_					0	0	0			REV__ENST00000361922.8_1_19:35803216-35804354:+|nuORF	REV__ENST00000361922.8_1_19:35803216-35804354:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2900695800781	2	501.290548	1000.56654	-0.9424	-0.00047241	0.84818	0.00042518	-0.094216	-4.7229E-05	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.78124	1	8739	8739		30.318	5.7985	1	6939200	+		24322	17562	16394	16404	27869	27869					0.06628261191792717
KTPRKPTVKKG	11	Unmodified	_KTPRKPTVKKG_					0	0	0		ENST00000560042.1_1_15:69706723-69714099:+|nuORF;nc|ENSG00000137807|Q02241-2|KIF23;nc|ENSG00000137807|Q02241|KIF23;ENSG00000137807|ENST00000679126|KIF23	ENST00000560042.1_1_15:69706723-69714099:+|nuORF	ENST00000560042.1_1_15:69706723-69714099:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.93255615234375	3	413.934706	1238.78229	-1.0065	-0.00041663	-3.7709	-0.0015609	-4.7774	-0.0019775	413.93306098265026	44.954	2.5911	44.923	43.876	46.467	-0.031067					192	60	4	0	0	0	0.75779	1	3695	3695		20.315	1.784	1	748080			24323	4236	16395	16405	27870	27870					0.1724502237643719
KTPRLIKRPT	10	Unmodified	_KTPRLIKRPT_					0	0	0			REV__ENSG00000180777|ENST00000690538|ANKRD30B	REV__ENSG00000180777|ENST00000690538|ANKRD30B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9295654296875	3	403.931185	1208.77173	0.25098	0.00010138	-4.1453	-0.0016744	-3.8943	-0.001573	403.92942319004646	47.073	4.6899	47.112	45.811	50.501	0.038181					268	130	4	0	0	0	0.85694	1	3564	3564		20.837	6.1435	1	2178500	+		24324	22416	16396	16406	27871	27871					0.17569039722025082
KTPSDAERHK	10	Unmodified	_KTPSDAERHK_					0	0	0		ENST00000375215.3_1_17:73629550-73630090:+|nuORF	ENST00000375215.3_1_17:73629550-73630090:+|nuORF	ENST00000375215.3_1_17:73629550-73630090:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.8079223632812	2	584.807094	1167.59963	-1.7945	-0.0010495	3.127	0.0018287	1.3325	0.00077926	584.8088382688337	43.722	1.0102	44.496	44.103	45.113	0.77379					68	24	4	0	0	0	0.70553	1	4030	4030		44.377	1.5129	1	5197200			24325	10793	16397	16407	27872	27872					0.02253843243852316
KTPTMKAKT	9	Unmodified	_KTPTMKAKT_					0	0	0			REV__ENSG00000054267|ENST00000264183|ARID4B	REV__ENSG00000054267|ENST00000264183|ARID4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	503.2917785644531	2	503.291702	1004.56885	-0.44824	-0.0002256	0.027035	1.3606E-05	-0.4212	-0.00021199	503.2916446910653	109.63	1.1143	109.75	109.43	110.55	0.12289					97	45	3	0	0	0	0.76853	1	11810	11810		33.922	7.2287	1	1304700	+		24326	16398	16398	16408	27873	27873					0.06674973605254308
KTPTMKAKT	9	Unmodified	_KTPTMKAKT_					0	0	0			REV__ENSG00000054267|ENST00000264183|ARID4B	REV__ENSG00000054267|ENST00000264183|ARID4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	503.2893981933594	2	503.291702	1004.56885	0.80608	0.00040569	-1.1561	-0.00058185	-0.35001	-0.00017616	503.2909725186853	109.68	1.4053	109.76	109.44	110.85	0.078552					88	52	3	0	0	0	0.75725	1	11807	11807		36.447	0.82846	1	1533800	+		24327	16398	16398	16408	27874	27874					0.06674973605254308
KTPTVLGH	8	Unmodified	_KTPTVLGH_					0	0	0		ENSG00000107518|ENST00000355044|ATRNL1;nc|ENSG00000107518|Q5VV63-2|ATRNL1	ENSG00000107518|ENST00000355044|ATRNL1	ENSG00000107518|ENST00000355044|ATRNL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.75018310546875	2	426.750527	851.486502	-0.018115	-7.7308E-06	-0.69834	-0.00029802	-0.71646	-0.00030575	426.7498422394427	80.054	1.9801	80.471	79.445	81.425	0.41621					119	46	4	0	0	0	0.93786	1	9183	9183		53.351	3.3269	1	660530			24328	2347	16399	16409	27875	27875					0.05481819588624148
KTPVKEQPQ	9	Unmodified	_KTPVKEQPQ_					0	0	0		nc|ENSG00000148773|P46013-2|MKI67;chr10:128113602-128116491|53|23.43|0.71|5.05|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67	nc|ENSG00000148773|P46013-2|MKI67	nc|ENSG00000148773|P46013-2|MKI67	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.7994995117188	2	527.798206	1053.58186	0.077075	4.068E-05	2.5851	0.0013644	2.6622	0.0014051	527.7998583804642	61.832	1.4183	62.385	62.006	63.425	0.55386					78	32	6	0	0	0	0.78983	1	6634	6634		27.882	1.0861	1	590010			24329	66	16400	16410	27876	27876					0.057211279889770594
KTQKTKKKLR	10	Unmodified	_KTQKTKKKLR_					0	0	0			REV__AluSz_dup47996|chr9:36681508-36681817:-|1.64201677267165|0.0574684267580931|4.84|63.0|7|2|sense	REV__AluSz_dup47996|chr9:36681508-36681817:-|1.64201677267165|0.0574684267580931|4.84|63.0|7|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.75421142578125	3	420.282106	1257.82449	0.068173	2.8652E-05	3.6823	0.0015476	3.7504	0.0015762	420.2835449937813	22.113	0.65905	21.502	21.206	21.865	-0.6107					31	16	3	0	0	0	0.37624	1	836	836		19.263	3.2559	1	84105	+		24330	15401	16401	16411	27877	27877					0.205889977848301
KTQVKCRKIL	10	Unmodified	_KTQVKCRKIL_					0	0	0		ENST00000588464.5_1_19:11462501-11464249:+|nuORF;nc|ENSG00000183401|P0C7I6-7|CCDC159;ENSG00000183401|ENST00000458408|CCDC159	ENST00000588464.5_1_19:11462501-11464249:+|nuORF	ENST00000588464.5_1_19:11462501-11464249:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2576904296875	3	406.256792	1215.74855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.201	1	55.164	54.664	55.664	-0.036827								0	0	0	0.45132	1	4613	4613		20.837	9.839	1				24331	7529	16402	16412	27878	27878					0.14930277613052567
KTQVQLKKIHS	11	Unmodified	_KTQVQLKKIHS_					0	0	0		ENSG00000183454|ENST00000330684|GRIN2A;nc|ENSG00000183454|Q12879-2|GRIN2A	ENSG00000183454|ENST00000330684|GRIN2A	ENSG00000183454|ENST00000330684|GRIN2A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.27001953125	3	437.269866	1308.78777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.01	1	61.129	60.629	61.629	0.11901								0	0	0	0.56276	1	5312	5312		32.034	11.197	1				24332	7533	16403	16413	27879	27879					0.1457270116827658
KTRADVKGGT	10	Unmodified	_KTRADVKGGT_					0	0	0		ENST00000475550.5_1_2:64069329-64114799:+|nuORF;nc|ENSG00000169764|Q16851-2|UGP2;ENSG00000169764|ENST00000337130|UGP2	ENST00000475550.5_1_2:64069329-64114799:+|nuORF	ENST00000475550.5_1_2:64069329-64114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7935791015625	2	516.793455	1031.57236	-0.047501	-2.4548E-05	0.082016	4.2386E-05	0.034515	1.7837E-05	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.86587	1	9007	9007		29.17	1.2878	1	692890			24333	6522	16404	16414	27880	27880					0.057833597034687045
KTRASRYHLKE	11	Unmodified	_KTRASRYHLKE_					0	0	0			REV__nc|ENSG00000204410|O43196-4|MSH5	REV__nc|ENSG00000204410|O43196-4|MSH5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8004455566406	3	463.596753	1387.76843	0.18269	8.4693E-05	-1.2774	-0.00059221	-1.0947	-0.00050752	463.59601943814357	45.308	0.39023	45.29	45.056	45.446	-0.018585					13	8	2	0	0	0	0.17521	1	3541	3541		22.562	1.5294	1	54352	+		24334	23490	16405	16415	27881	27881					0.09005744877345023
KTREVAERK	9	Unmodified	_KTREVAERK_					0	0	0		ENSG00000214642|ENST00000398718|DEFB113	ENSG00000214642|ENST00000398718|DEFB113	ENSG00000214642|ENST00000398718|DEFB113	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	558.828125	2	558.827829	1115.64111	-0.62883	-0.00035141	-0.01405	-7.8513E-06	-0.64288	-0.00035926	558.8277162642158	65.597	0.54869	65.642	65.381	65.93	0.045113					57	27	3	0	0	0	0.69624	1	5839	5839		40.778	1.5253	1	1628700			24335	8629	16406	16416	27882	27882					0.08791024003176062
KTRFLGKILKP	11	Unmodified	_KTRFLGKILKP_					0	0	0		ENST00000422939.1_1_8:116649485-116821871:-|nuORF	ENST00000422939.1_1_8:116649485-116821871:-|nuORF	ENST00000422939.1_1_8:116649485-116821871:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.2847900390625	3	434.286969	1299.83908	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.647	1	54.64	54.14	55.14	-0.0077095								0	0	0	0.56276	1	4830	4830		22.562	10.629	1				24336	11488	16407	16417	27883	27883					0.20115069932990082
KTRIWVLLHLR	11	Unmodified	_KTRIWVLLHLR_					0	0	0			REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9734802246094	3	478.973384	1433.89832	-1.7043	-0.00081634	3.2384	0.0015511	1.5341	0.00073477	478.9749318699197	42.97	1.9218	42.97	41.976	43.898	0					105	47	4	0	0	0	0.81021	1	3033	3033		9.2118	0.41249	1	335660	+		24337	27882	16408	16418	27884	27884					0.19872965947138255
KTRIWVLLHLR	11	Unmodified	_KTRIWVLLHLR_					0	0	0			REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.97418212890625	3	478.973384	1433.89832	0.065395	3.1322E-05	2.2352	0.0010706	2.3006	0.0011019	478.9743761165068	49.154	1.8702	49.148	48.387	50.257	-0.0056381					110	43	3	0	0	0	0.79476	1	4167	4167		12.433	1.8709	1	187140	+		24338	27882	16408	16418	27885	27885					0.19872965947138255
KTRIWVLLHLR	11	Unmodified	_KTRIWVLLHLR_					0	0	0			REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97467041015625	3	478.973384	1433.89832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.307	1	59.276	58.776	59.776	-0.030888								0	0	0	0.56276	1	5549	5549		16.53	7.3181	1		+		24339	27882	16408	16418	27886	27886					0.19872965947138255
KTRIWVLLHLR	11	Unmodified	_KTRIWVLLHLR_					0	0	0			REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97503662109375	3	478.973384	1433.89832	-0.90277	-0.0004324	3.3572	0.001608	2.4544	0.0011756	478.97487033218596	49.369	1.842	49.394	48.497	50.339	0.025578					115	47	3	0	0	0	0.79716	1	3768	3768		11.932	2.2862	1	238510	+		24340	27882	16408	16418	27887	27887					0.19872965947138255
KTRIWVLLHLR	11	Unmodified	_KTRIWVLLHLR_					0	0	0			REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97283935546875	3	478.973384	1433.89832	0.29105	0.00013941	2	0.00095795	2.2911	0.0010974	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.80373	1	3291	3291		10.562	0.91575	1	395190	+		24341	27882	16408	16418	27888	27888					0.19872965947138255
KTRIWVLLHLR	11	Unmodified	_KTRIWVLLHLR_					0	0	0			REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9750671386719	3	478.973384	1433.89832	0.32204	0.00015425	2.3016	0.0011024	2.6237	0.0012567	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.80373	1	3747	3747		10.562	0.45799	1	307830	+		24342	27882	16408	16418	27889	27889					0.19872965947138255
KTRIWVLLHLR	11	Unmodified	_KTRIWVLLHLR_					0	0	0			REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9725036621094	3	478.973384	1433.89832	-0.20548	-9.8418E-05	2.5121	0.0012032	2.3066	0.0011048	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.79476	1	3517	3517		12.433	1.4346	1	468190	+		24343	27882	16408	16418	27890	27890					0.19872965947138255
KTRIWVLLHLR	11	Unmodified	_KTRIWVLLHLR_					0	0	0			REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9731140136719	3	478.973384	1433.89832	-0.315	-0.00015088	2.7524	0.0013183	2.4374	0.0011675	478.9746652956354	49.514	1.8124	49.42	48.44	50.252	-0.093178					109	43	3	0	0	0	0.81892	1	3755	3755		8.0344	2.0333	1	294110	+		24344	27882	16408	16418	27891	27891					0.19872965947138255
KTRIWVLLHLR	11	Unmodified	_KTRIWVLLHLR_					0	0	0			REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	REV__ENST00000505485.1_1_6:119177705-119215238:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3086242675781	3	478.973384	1433.89832	-2.3958	-0.0011475	3.0439	0.0014579	0.64807	0.00031041	479.30894163677516	41.278	0.94159	41.912	41.604	42.546	0.6339					102	25	5	0	0	0	0.79476	1	3658	3658		12.433	3.6335	1	6785400	+		24345	27882	16408	16418	27892	27892					0.19872965947138255
KTRKASTG	8	Unmodified	_KTRKASTG_					0	0	0			REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.7510070800781	2	424.751059	847.487565	-1.1681	-0.00049614	-0.38043	-0.00016159	-1.5485	-0.00065773	424.750822991978	39.899	0.93882	40.267	39.687	40.626	0.36797					55	22	3	0	0	0	0.79929	1	3347	3347		18.324	0	1	542840	+		24346	18459	16409	16419	27893	27893					0.057720339575212165
KTRKASTG	8	Unmodified	_KTRKASTG_					0	0	0			REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	424.751059	847.487565	-1.8826	-0.00079964	0.88427	0.00037559	-0.99835	-0.00042405	424.7512855849676	39.945	0.79489	39.945	39.584	40.379	0	-0.16834	0.0014073	NaN	18.324	49	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	346260	+		24347	18459	16409	16419							0.057720339575212165
KTRKASTG	8	Unmodified	_KTRKASTG_					0	0	0			REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	424.751059	847.487565	-1.3669	-0.00058058	-0.11631	-4.9402E-05	-1.4832	-0.00062999	424.7508435929887	40.133	0.96635	40.089	39.623	40.589	-0.043697	-0.02349	0.00055734	NaN	18.324	59	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	817050	+		24348	18459	16409	16419							0.057720339575212165
KTRKASTG	8	Unmodified	_KTRKASTG_					0	0	0			REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	424.751059	847.487565	0.66936	0.00028431	-2.4074	-0.0010225	-1.738	-0.00073824	424.7500309215844	40.056	0.96758	40.065	39.601	40.568	0.0092812	-0.04797	-0.001389	NaN	18.324	54	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	914060	+		24349	18459	16409	16419							0.057720339575212165
KTRKASTG	8	Unmodified	_KTRKASTG_					0	0	0			REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	424.751059	847.487565	-1.8106	-0.00076906	0.28416	0.0001207	-1.5265	-0.00064836	424.7512718825221	40.189	0.92111	40.196	39.792	40.713	0.0065002	0.082878	0.00089754	NaN	18.324	59	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	655580	+		24350	18459	16409	16419							0.057720339575212165
KTRKASTG	8	Unmodified	_KTRKASTG_					0	0	0			REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	424.751059	847.487565	0.18635	7.9154E-05	-1.5632	-0.00066397	-1.3768	-0.00058482	424.750279936593	40.024	0.87303	40.105	39.68	40.553	0.081345	-0.0076774	-0.0006718	NaN	18.324	54	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	617930	+		24351	18459	16409	16419							0.057720339575212165
KTRKASTG	8	Unmodified	_KTRKASTG_					0	0	0			REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	424.751059	847.487565	-0.16039	-6.8127E-05	-1.0276	-0.00043649	-1.188	-0.00050462	424.75044374405724	40.059	0.74833	40.011	39.65	40.398	-0.047886	-0.10198	-0.00021684	NaN	18.324	54	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	536040	+		24352	18459	16409	16419							0.057720339575212165
KTRKASTG	8	Unmodified	_KTRKASTG_					0	0	0			REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	REV__ENST00000463966.5_1_3:109047772-109056364:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	424.751059	847.487565	-1.1681	-0.00049614	-0.38043	-0.00016159	-1.5485	-0.00065773	424.750822991978	39.899	0.93882	40.267	39.687	40.626	0.36797	0.15391	0.00033297	NaN	18.324	55	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	542840	+		24353	18459	16409	16419							0.057720339575212165
KTRKKKYSSTL	11	Unmodified	_KTRKKKYSSTL_					0	0	0		ENST00000507841.5_1_5:1599703-1599838:-|nuORF	ENST00000507841.5_1_5:1599703-1599838:-|nuORF	ENST00000507841.5_1_5:1599703-1599838:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.78759765625	3	447.273388	1338.79833	-1.7725	-0.00079278	0.91566	0.00040955	-0.85682	-0.00038323	447.27383748627057	39.382	0.72571	39.75	39.384	40.11	0.36797					22	16	2	0	0	0	0.1745	1	3244	3244		8.7993	0	1	283950			24354	12965	16410	16420	27894	27894					0.1424868382268869
KTRLALTAGT	10	Unmodified	_KTRLALTAGT_					0	0	0			REV__nc|ENSG00000140284|O14975-2|SLC27A2	REV__nc|ENSG00000140284|O14975-2|SLC27A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.314453125	2	516.314023	1030.61349	3.1012	0.0016012	-3.1554	-0.0016292	-0.054235	-2.8002E-05	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.82886	1	12878	12878		37.812	12.237	1	1162600	+		24355	29887	16411	16421	27895	27895					0.09941120742905696
KTRLARGA	8	Unmodified	_KTRLARGA_					0	0	0			REV__ENST00000323534.4_2_3:152881030-152881288:+|nuORF	REV__ENST00000323534.4_2_3:152881030-152881288:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7732238769531	2	436.774868	871.535184	0.39754	0.00017364	-3.7525	-0.001639	-3.355	-0.0014654	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.80308	1	1243	1243		16.473	0.83134	1	81327	+		24356	25031	16412	16422	27896	27896					0.0942773294835888
KTRLRRKIIQH	11	Unmodified	_KTRLRRKIIQH_					0	0	0			REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.6462097167969	3	483.647671	1447.92118	-1.6265	-0.00078667	-1.0559	-0.00051067	-2.6824	-0.0012973	483.64706776464374	46.522	1.6286	46.522	46.06	47.688	0					186	51	5	0	0	0	0.78083	1	3561	3561		15.337	4.7507	1	4540800	+		24357	19448	16413	16423	27897	27897					0.2151398506462101
KTRLRRKIIQH	11	Unmodified	_KTRLRRKIIQH_					0	0	0			REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.64630126953125	3	483.647671	1447.92118	-1.6199	-0.00078345	-1.0977	-0.0005309	-2.7176	-0.0013144	483.64701567342865	46.699	1.7316	46.695	46.155	47.886	-0.0041618					198	50	6	0	0	0	0.81219	1	3872	3872		8.7993	2.1397	1	5137200	+		24358	19448	16413	16423	27898	27898					0.2151398506462101
KTRLRRKIIQH	11	Unmodified	_KTRLRRKIIQH_					0	0	0			REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.64630126953125	3	483.647671	1447.92118	-0.83511	-0.0004039	-1.4741	-0.00071293	-2.3092	-0.0011168	483.6468148790766	48.119	2.7855	48.141	47.459	50.244	0.02227					217	75	4	0	0	0	0.80373	1	3656	3656		10.562	1.7626	1	1942300	+		24359	19448	16413	16423	27899	27899					0.2151398506462101
KTRLRRKIIQH	11	Unmodified	_KTRLRRKIIQH_					0	0	0			REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.64605712890625	3	483.647671	1447.92118	0.29802	0.00014413	-2.9248	-0.0014146	-2.6268	-0.0012704	483.6461229931169	46.466	1.647	46.505	45.984	47.631	0.038181					176	46	5	0	0	0	0.79716	1	3458	3458		11.932	0.47776	1	4692700	+		24360	19448	16413	16423	27900	27900					0.2151398506462101
KTRLVLMA	8	Unmodified	_KTRLVLMA_					0	0	0			REV__ENSG00000095319|ENST00000372577|NUP188	REV__ENSG00000095319|ENST00000372577|NUP188	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.2901611328125	2	466.291505	930.568457	0.52735	0.0002459	-4.0667	-0.0018963	-3.5394	-0.0016504	466.28951494352106	73.831	0.94804	73.962	73.721	74.669	0.13127					82	37	3	0	0	0	0.87922	1	6863	6863		31.955	7.4508	1	894650	+		24361	17057	16414	16424	27901	27901					0.10039598676041805
KTRNHASL	8	Unmodified	_KTRNHASL_					0	0	0			REV__ENST00000492103.1_1_3:9822043-9829075:-|nuORF	REV__ENST00000492103.1_1_3:9822043-9829075:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.2869873046875	2	463.761958	925.509363	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.315	1	58.308	57.808	58.808	-0.0074387								0	0	0	0.29498	1	4961	4961		26.796	1.3459	1		+		24362	21717	16415	16425	27902	27902					0.04362838706072125
KTRPEGQLT	9	Unmodified	_KTRPEGQLT_					0	0	0			REV__ENSG00000185532|ENST00000373980|PRKG1	REV__ENSG00000185532|ENST00000373980|PRKG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3098754882812	2	515.288005	1028.56146	0.71575	0.00036882	3.2065	0.0016523	3.9222	0.0020211	515.2897644765251	57.119	0.57466	57.674	57.313	57.888	0.55512					21	13	2	0	0	0	0.20789	1	5965	5965		37.812	13.292	1	234640	+		24363	22773	16416	16426	27903	27903					0.04831957329179204
KTRQKNPRLNI	11	Unmodified	_KTRQKNPRLNI_					0	0	0			REV__ENSG00000112210|ENST00000468148|RAB23	REV__ENSG00000112210|ENST00000468148|RAB23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.6111145019531	3	456.612515	1366.81572	-0.35463	-0.00016193	-1.045	-0.00047715	-1.3996	-0.00063907	456.61192876380494	16.153	0.26143	16.073	15.955	16.216	-0.080017					20	10	3	0	0	0	0.76892	1	85	85		17.833	1.9125	1	50824	+		24364	17926	16417	16427	27904	27904					0.14698024148378863
KTRRALIIEA	10	Unmodified	_KTRRALIIEA_					0	0	0			REV__nc|nan|Q5JVX7-2|C1orf141	REV__nc|nan|Q5JVX7-2|C1orf141	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.8663940429688	2	585.869497	1169.72444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.64	1	26.464	25.964	26.964	-0.17559								0	0	0	0.45132	1	1474	1474		19.997	3.5236	1		+		24365	23448	16418	16428	27905	27905					0.14636760451048758
KTRRKGPE	8	Unmodified	_KTRRKGPE_					0	0	0			REV__ENSG00000126870|ENST00000407559|DYNC2I1	REV__ENSG00000126870|ENST00000407559|DYNC2I1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.2813415527344	2	486.290882	970.567212	-0.037482	-1.8227E-05	0.70695	0.00034379	0.66947	0.00032556	486.29083977754306	48.759	0.67777	49.663	49.168	49.846	0.90424					26	16	2	0	0	0	0.4196	1	4755	4755		37.159	14.117	1	247540	+		24366	18717	16419	16429	27906	27906					0.08075100631515397
KTRRKKIFKA	10	Unmodified	_KTRRKKIFKA_					0	0	0			REV__ENST00000472344.1_1_9:90113992-90254278:+|nuORF	REV__ENST00000472344.1_1_9:90113992-90254278:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747802734375	3	425.950579	1274.82991	0.35937	0.00015308	3.5177	0.0014984	3.8771	0.0016515	426.286202394529	37.568	0.52879	37.881	37.746	38.274	0.31312					14	13	2	0	0	0	0.37624	1	3049	3049		13.508	0.69623	1	139470	+		24367	23166	16420	16430	27907	27907					0.2034872136730428
KTRRKVAGYFK	11	Unmodified	_KTRRKVAGYFK_					0	0	0		ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9432678222656	3	451.941973	1352.80409	-1.6861	-0.00076203	4.482	0.0020256	2.7959	0.0012636	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.77511	1	4381	4381		16.53	0.6092	1	792670			24368	8529	16421	16431	27908	27908					0.1417982712500816
KTRRKVAGYFK	11	Unmodified	_KTRRKVAGYFK_					0	0	0		ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9432373046875	3	451.941973	1352.80409	-0.06697	-3.0266E-05	2.8157	0.0012725	2.7487	0.0012423	451.9431207678107	53.546	2.822	53.541	51.391	54.213	-0.0053711					204	73	4	0	0	0	0.76087	1	4603	4603		19.627	1.0959	1	724120			24369	8529	16421	16431	27909	27909					0.1417982712500816
KTRSQMPYKV	10	Unmodified	_KTRSQMPYKV_					0	0	0		ENSG00000175445|ENST00000650287|LPL	ENSG00000175445|ENST00000650287|LPL	ENSG00000175445|ENST00000650287|LPL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7671203613281	3	413.228902	1236.66488	-0.80188	-0.00033136	-2.7583	-0.0011398	-3.5602	-0.0014712	413.2276195395286	40.043	0.35925	40.411	40.151	40.511	0.36797					14	8	2	0	0	0	0.37624	1	3359	3359		10.104	0	1	171210			24370	7016	16422	16432	27910	27910					0.05601121445329227
KTRSRVTL	8	Unmodified	_KTRSRVTL_					0	0	0		ENST00000495352.5_1_7:102124102-102135092:-|nuORF;ENST00000522223.1_7:102223281-102234330:-|nuORF;ENSG00000170667|ENST00000465829|RASA4B;ENSG00000105808|ENST00000262940|RASA4;nc|ENSG00000105808|O43374-2|RASA4	ENST00000495352.5_1_7:102124102-102135092:-|nuORF	ENST00000495352.5_1_7:102124102-102135092:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.8009948730469	2	480.801083	959.587613	-0.095214	-4.5779E-05	-0.50772	-0.00024411	-0.60293	-0.00028989	480.80074135922035	95.38	4.3631	95.446	94.67	99.033	0.065918					323	101	5	0	0	0	0.91977	1	10231	10231		45.952	6.6991	1	17278000			24371	2253	16423	16433	27911	27911					0.10620271291338668
KTRTELFDL	9	Unmodified	_KTRTELFDL_					0	0	0		nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-2|CUX1;ENSG00000257923|ENST00000292535|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-6|CUX1;nc|ENSG00000257923|P39880-4|CUX1;ENST00000558836.5_1_7:101575863-101926379:+|nuORF;nc|ENSG00000257923|Q13948-9|CUX1;nc|ENSG00000257923|Q13948-10|CUX1;nc|ENSG00000257923|Q13948-2|CUX1;nc|ENSG00000257923|Q13948|CUX1;ENST00000560541.5_1_7:101556607-101926379:+|nuORF;ENST00000485792.1_1_7:101754981-101758554:+|nuORF;ENST00000465461.6_1_7:101747665-101768865:+|nuORF;nc|ENSG00000257923|P39880-9|CUX1	nc|ENSG00000257923|P39880-5|CUX1	nc|ENSG00000257923|P39880-5|CUX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.32666015625	2	561.811313	1121.60807	0.24286	0.00013644	1.2613	0.00070861	1.5042	0.00084506	561.812053612296	62.125	1.1257	62.68	62.429	63.555	0.55449					33	25	2	0	0	0	0.20789	1	6695	6695		27.882	0	1	208520			24372	8909	16424	16434	27912	27912					0.05213397160468958
KTRTQVHQPSL	11	Unmodified	_KTRTQVHQPSL_					0	0	0		nc|ENSG00000185220|Q6P3X8-2|PGBD2;ENSG00000185220|ENST00000329291|PGBD2	nc|ENSG00000185220|Q6P3X8-2|PGBD2	nc|ENSG00000185220|Q6P3X8-2|PGBD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	647.8648071289062	2	647.864943	1293.71533	-1.141	-0.00073923	1.8287	0.0011847	0.68764	0.0004455	647.8659805106048	113.08	0.20975	113.05	113.01	113.22	-0.032333					10	5	2	0	0	0	0.71207	1	12074	12074		29.551	1.4693	1	15061000			24373	7689	16425	16435	27913	27913					0.08022367094713445
KTRVAHGT	8	Unmodified	_KTRVAHGT_					0	0	0		ENSG00000100605|ENST00000267615|ITPK1;nc|ENSG00000100605|Q13572-2|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2523498535156	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87479	2	7227	7227;7857		33.516	1.5607	1	1788100			24374	1856	16426	16436	27914;27915	27914					0.048394536773685104
KTRVAHGT	8	Unmodified	_KTRVAHGT_					0	0	0		ENSG00000100605|ENST00000267615|ITPK1;nc|ENSG00000100605|Q13572-2|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516784667969	2	435.251226	868.487899	-0.16621	-7.2343E-05	0.40306	0.00017543	0.23685	0.00010309	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.87479	2	7435	7435;7482		38.806	3.1879	1	768200			24375	1856	16426	16436	27916;27917	27916					0.048394536773685104
KTRVAHGT	8	Unmodified	_KTRVAHGT_					0	0	0		ENSG00000100605|ENST00000267615|ITPK1;nc|ENSG00000100605|Q13572-2|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2519226074219	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.88601	1	8267	8267		34.173	2.2177	1	3292300			24376	1856	16426	16436	27918	27918					0.048394536773685104
KTRVAHGT	8	Unmodified	_KTRVAHGT_					0	0	0		ENSG00000100605|ENST00000267615|ITPK1;nc|ENSG00000100605|Q13572-2|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2511901855469	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.89043	1	7542	7542		35.618	3.6634	1	3370400			24377	1856	16426	16436	27919	27919					0.048394536773685104
KTRVAHGT	8	Unmodified	_KTRVAHGT_					0	0	0		ENSG00000100605|ENST00000267615|ITPK1;nc|ENSG00000100605|Q13572-2|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2518310546875	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.89962	1	7252	7252		38.806	4.6336	1	712390			24378	1856	16426	16436	27920	27920					0.048394536773685104
KTRVAHGT	8	Unmodified	_KTRVAHGT_					0	0	0		ENSG00000100605|ENST00000267615|ITPK1;nc|ENSG00000100605|Q13572-2|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.252197265625	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.8347	2	7987	7987;8047		29.15	2.5607	1	2743300			24379	1856	16426	16436	27921;27922	27921					0.048394536773685104
KTRVAHGT	8	Unmodified	_KTRVAHGT_					0	0	0		ENSG00000100605|ENST00000267615|ITPK1;nc|ENSG00000100605|Q13572-2|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	ENSG00000100605|ENST00000267615|ITPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2530822753906	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.89494	1	7980	7980		37.159	1.5408	1	2494100			24380	1856	16426	16436	27923	27923					0.048394536773685104
KTRVKLPSGSK	11	Unmodified	_KTRVKLPSGSK_					0	0	0		ENST00000525232.5_1_8:146016635-146016902:-|nuORF;ENSG00000161016|ENST00000528957|RPL8	ENST00000525232.5_1_8:146016635-146016902:-|nuORF	ENST00000525232.5_1_8:146016635-146016902:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9176940917969	3	400.918945	1199.73501	1.7725	0.00071063	-1.2173	-0.00048804	0.5552	0.00022259	400.91834139121914	15.853	0.31401	15.363	15.255	15.569	-0.48917					10	6	2	0	0	0	0.66858	1	55	55		36.528	0	1	227050			24381	5626	16427	16437	27924	27924					0.1431274310543813
KTSAALRPSA	10	Unmodified	_KTSAALRPSA_					0	0	0		ENST00000371753.5_1_9:138901598-138901784:-|nuORF	ENST00000371753.5_1_9:138901598-138901784:-|nuORF	ENST00000371753.5_1_9:138901598-138901784:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2903137207031	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.85981	1	9259	9259		35.152	2.3396	1	9883700			24382	10675	16428	16438	27925	27925					0.06628261191792717
KTSAALRPSA	10	Unmodified	_KTSAALRPSA_					0	0	0		ENST00000371753.5_1_9:138901598-138901784:-|nuORF	ENST00000371753.5_1_9:138901598-138901784:-|nuORF	ENST00000371753.5_1_9:138901598-138901784:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2906494140625	2	501.290548	1000.56654	-1.5697	-0.00078686	1.3648	0.00068414	-0.20492	-0.00010273	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.86471	1	8826	8826		30.318	0	1	9242300			24383	10675	16428	16438	27926	27926					0.06628261191792717
KTSAELHV	8	Unmodified	_KTSAELHV_					0	0	0		ENST00000526177.5_1_11:75161715-75162177:-|nuORF	ENST00000526177.5_1_11:75161715-75162177:-|nuORF	ENST00000526177.5_1_11:75161715-75162177:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.74462890625	2	442.745442	883.476331	1.7711	0.00078413	-3.0311	-0.001342	-1.26	-0.00055788	442.7439445464006	89.634	1.1663	89.682	89.309	90.476	0.048157					52	26	3	0	0	0	0.87064	1	9267	9267		29.15	4.9468	1	715740			24384	13252	16429	16439	27927	27927					0.029932118633723803
KTSCHISK	8	Unmodified	_KTSCHISK_					0	0	0		ENST00000344756.8_1_7:155100162-155100309:+|nuORF	ENST00000344756.8_1_7:155100162-155100309:+|nuORF	ENST00000344756.8_1_7:155100162-155100309:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.2388916015625	2	452.23947	902.464386	2.4335	0.0011005	-2.2694	-0.0010263	0.16414	7.423E-05	452.23834794535566	25.317	1.1666	24.886	24.272	25.439	-0.4311					55	26	3	0	0	0	0.77771	2	1285	1285;1323		64.207	5.4253	1	516220			24385	10296	16430	16440	27928;27929	27928					0.009252718485299738
KTSFARGCIK	10	Unmodified	_KTSFARGCIK_					0	0	0			REV__ENSG00000101115|ENST00000217086|SALL4	REV__ENSG00000101115|ENST00000217086|SALL4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.8065185546875	2	555.808051	1109.60155	0.2531	0.00014067	-3.2797	-0.0018229	-3.0266	-0.0016822	555.8062035865635	59.386	0.70735	59.48	59.191	59.898	0.094059					50	20	3	0	0	0	0.57924	1	5083	5083		51.193	3.5354	1	269860	+		24386	17243	16431	16441	27930	27930					0.051131807280853536
KTSFPLQIKQN	11	Unmodified	_KTSFPLQIKQN_					0	0	0		ENSG00000051341|ENST00000264233|POLQ;nc|ENSG00000051341|O75417-2|POLQ	ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2489929199219	3	435.250472	1302.72959	0.44652	0.00019435	-3.2702	-0.0014234	-2.8237	-0.001229	435.24894201690216	18.834	0.5574	18.204	17.975	18.533	-0.62961					30	12	4	0	0	0	0.69071	1	440	440		33.039	3.4886	1	223790			24387	999	16432	16442	27931	27931					0.09033019522985342
KTSKKTRNMA	10	Unmodified	_KTSKKTRNMA_					0	0	0		ENST00000373212.5_1_X:80553798-80553834:+|nuORF	ENST00000373212.5_1_X:80553798-80553834:+|nuORF	ENST00000373212.5_1_X:80553798-80553834:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.832275390625	2	582.829514	1163.64448	2.3168	0.0013503	3.0773	0.0017935	5.3941	0.0031438	582.8313275695042	94.548	3.2085	94.489	93.331	96.54	-0.059212					184	75	3	0	0	0	0.8651	1	10016	10016		25.574	2.5316	1	663000			24388	10734	16433	16443	27932	27932					0.06919950785527362
KTSKQLTAH	9	Unmodified	_KTSKQLTAH_					0	0	0			REV__ENST00000597423.1_1_19:59058531-59059226:+|nuORF	REV__ENST00000597423.1_1_19:59058531-59059226:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2274475097656	2	507.290548	1012.56654	-0.21044	-0.00010676	0.80957	0.00041069	0.59913	0.00030393	507.2907396835209	29.892	0.52922	29.877	29.601	30.13	-0.015167					16	11	2	0	0	0	0.20789	1	1543	1543		31.53	0	1	34331	+		24389	15726	16434	16444	27933	27933					0.06076261191788035
KTSKYNILTF	10	Unmodified	_KTSKYNILTF_					0	0	0		nc|ENSG00000143515|P98198-4|ATP8B2;ENST00000426445.1_1_1:154301436-154313374:+|nuORF;nc|ENSG00000143515|P98198-2|ATP8B2;ENSG00000143515|ENST00000368489|ATP8B2;nc|ENSG00000143515|P98198|ATP8B2;nc|ENSG00000143515|P98198-3|ATP8B2	nc|ENSG00000143515|P98198-4|ATP8B2	nc|ENSG00000143515|P98198-4|ATP8B2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.8991394042969	3	405.564168	1213.67067	-0.93523	-0.0003793	2.3461	0.00095149	1.4109	0.00057219	405.56503343144624	60.15	1.6726	60.15	59.126	60.798	0.00051117					148	54	3	0	0	0	0.8505	1	5176	5176		13.508	0	1	288220			24390	4641	16435	16445	27934	27934					0.07238543228640992
KTSLIVSG	8	Unmodified	_KTSLIVSG_					0	0	0		ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	402.7423400878906	2	402.744911	803.475269	-1.9087	-0.00076874	-4.406	-0.0017745	-6.3148	-0.0025432	402.7429753530759	38.078	1.2301	38.078	37.711	38.941	0					76	29	4	0	0	0	0.84341	1	2331	2331		24.203	0	1	611140			24391	11076	16436	16446	27935	27935					0.0656699749447398
KTSLIVSG	8	Unmodified	_KTSLIVSG_					0	0	0		ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	402.744911	803.475269	0.012037	4.8479E-06	-6.2566	-0.0025198	-6.2446	-0.002515	402.74230908552823	38.368	1.0389	38.34	37.949	38.988	-0.027843	0.17448	-0.00056874	NaN	24.203	49	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164890			24392	11076	16436	16446							0.0656699749447398
KTSLIVSG	8	Unmodified	_KTSLIVSG_					0	0	0		ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	402.744911	803.475269	-1.1573	-0.0004661	-4.7725	-0.0019221	-5.9298	-0.0023882	402.742899565723	38.216	0.88314	38.165	37.85	38.733	-0.050369	-2.0915E-05	0.00062668	NaN	24.203	43	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165820			24393	11076	16436	16446							0.0656699749447398
KTSLIVSG	8	Unmodified	_KTSLIVSG_					0	0	0		ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	402.744911	803.475269	0.7593	0.00030581	-6.7593	-0.0027223	-6	-0.0024165	402.7421137658842	38.191	0.8608	38.202	37.857	38.717	0.011173	0.036702	-0.00097362	NaN	24.203	44	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173160			24394	11076	16436	16446							0.0656699749447398
KTSLIVSG	8	Unmodified	_KTSLIVSG_					0	0	0		ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	402.744911	803.475269	-1.9062	-0.00076771	-4.2104	-0.0016957	-6.1166	-0.0024634	402.74302834423764	38.302	0.69923	38.318	37.997	38.697	0.016563	0.15328	0.0010795	NaN	24.203	41	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105060			24395	11076	16436	16446							0.0656699749447398
KTSLIVSG	8	Unmodified	_KTSLIVSG_					0	0	0		ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	402.744911	803.475269	0.16923	6.8155E-05	-6.6848	-0.0026923	-6.5156	-0.0026241	402.7421571837853	38.103	0.70872	38.197	37.852	38.561	0.094322	0.031785	-0.00091363	NaN	24.203	43	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140370			24396	11076	16436	16446							0.0656699749447398
KTSLIVSG	8	Unmodified	_KTSLIVSG_					0	0	0		ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	402.744911	803.475269	-0.15834	-6.3772E-05	-5.9722	-0.0024053	-6.1305	-0.002469	402.74242191399134	38.175	0.65185	38.118	37.851	38.503	-0.057915	-0.047621	-0.00033962	NaN	24.203	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123310			24397	11076	16436	16446							0.0656699749447398
KTSLIVSG	8	Unmodified	_KTSLIVSG_					0	0	0		ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	ENST00000394703.9_1_7:86781924-86783740:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	402.744911	803.475269	0.33517	0.00013499	-6.7062	-0.0027009	-6.371	-0.0025659	402.74216154197575	37.418	0.59636	37.904	37.577	38.174	0.48581	-0.26168	-0.00093087	NaN	24.203	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	285220			24398	11076	16436	16446							0.0656699749447398
KTSLRLFFKQ	10	Unmodified	_KTSLRLFFKQ_					0	0	0		chr5:70222015-70555218|14|29.93|0.38|6.29|-|1|GUSBP14,GUSBP15|1;chr5:70203965-70555218|13|20.08|0.3|6.04|-|1|None,GUSBP15|1;chr5:69875319-70789208|13|10.92|0.01|10.57|+|1|GUSBP13,GUSBP16|1;chr5:69642289-70555218|13|13.62|0.01|10.52|-|1|GUSBP3,GUSBP15|1;chr5:69642289-70258882|13|15.0|0.01|10.41|-|1|GUSBP3,GUSBP14|1	chr5:70222015-70555218|14|29.93|0.38|6.29|-|1|GUSBP14,GUSBP15|1	chr5:70222015-70555218|14|29.93|0.38|6.29|-|1|GUSBP14,GUSBP15|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.378662109375	2	634.379697	1266.74484	-0.13787	-8.7463E-05	-3.847	-0.0024405	-3.9849	-0.0025279	634.377061455115	118.49	0.49898	118.42	118.19	118.69	-0.07531					48	18	4	0	0	0	0.82886	1	12704	12704		37.812	1.3648	1	1728300			24399	454	16437	16447	27936	27936					0.12213931110841258
KTSNLLLSH	9	Unmodified	_KTSNLLLSH_					0	0	0		nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;ENSG00000008128|ENST00000404249|CDK11A;nc|ENSG00000248333|P21127-10|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;ENSG00000248333|ENST00000341832|CDK11B;nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127-5|CDK11B;nc|ENSG00000248333|P21127|CDK11B;ENST00000598846.1_1_1:1635046-1639660:-|nuORF;nc|ENSG00000008128|Q9UQ88-5|CDK11A;nc|ENSG00000248333|P21127-12|CDK11B;nc|ENSG00000008128|Q9UQ88-10|CDK11A;nc|ENSG00000248333|P21127-4|CDK11B;nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-3|CDK11B	nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000248333|P21127-6|CDK11B	nc|ENSG00000008128|Q9UQ88-9|CDK11A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.7919006347656	2	506.792924	1011.57129	1.758	0.00089096	-1.7732	-0.00089866	-0.015199	-7.7026E-06	506.79190761729194	33.026	0.84248	33.238	32.809	33.651	0.21168					28	19	2	0	0	0	0.26953	1	2369	2369		67.494	6.5217	1	314690			24400	736;15285	16438	16448	27937	27937					0.06597145334569632
KTSQLTLQK	9	Unmodified	_KTSQLTLQK_					0	0	0		chr12:27026534-27027349|15|11.47|0.36|5.01|+|0|MED21,None|1	chr12:27026534-27027349|15|11.47|0.36|5.01|+|0|MED21,None|1	chr12:27026534-27027349|15|11.47|0.36|5.01|+|0|MED21,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8136596679688	2	523.813856	1045.61316	0.95438	0.00049992	-0.97519	-0.00051082	-0.02081	-1.0901E-05	523.8133160664315	24.781	0.63198	24.452	24.206	24.838	-0.32825					31	13	3	0	0	0	0.68711	1	1223	1223		41.427	0	1	215120			24401	127	16439	16449	27938	27938					0.0921770102308983
KTSSLLIL	8	Unmodified	_KTSSLLIL_					0	0	0		ENSG00000198752|ENST00000361246|CDC42BPB	ENSG00000198752|ENST00000361246|CDC42BPB	ENSG00000198752|ENST00000361246|CDC42BPB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713623046875	2	437.784036	873.553519	-0.54979	-0.00024069	3.3768	0.0014783	2.827	0.0012376	437.7850196192205	38.736	0.29231	39.259	38.994	39.287	0.52236					11	6	2	0	0	0	0.4196	1	3194	3194		12.959	0.75233	1	126360			24402	8321	16440	16450	27939	27939					0.11168430079726477
KTSTILAAA	9	Unmodified	_KTSTILAAA_					0	0	0		nc|ENSG00000163918|P35249-2|RFC4;ENST00000494047.5_1_3:186509405-186522502:-|nuORF;ENSG00000163918|ENST00000296273|RFC4	nc|ENSG00000163918|P35249-2|RFC4	nc|ENSG00000163918|P35249-2|RFC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633056640625	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.78058	1	3348	3348		30.504	3.8107	1	4268300			24403	5882	16441	16451	27940	27940					0.07010669040221273
KTSTVPPSLRK	11	Unmodified	_KTSTVPPSLRK_					0	0	0		ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B	ENSG00000213676|ENST00000375203|ATF6B	ENSG00000213676|ENST00000375203|ATF6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.2470703125	3	405.24695	1212.71902	1.65	0.00066868	-1.1207	-0.00045416	0.52934	0.00021451	405.24639893952656	23.489	3.066	23.108	22.404	25.47	-0.38178					149	70	4	0	0	0	0.33008	4	1061	1026;1049;1061;1073		67.214	17.748	1	247320			24404	8600	16442	16452	27941;27942;27943;27944	27943					0.12117036868517062
KTSTVPPSLRK	11	Unmodified	_KTSTVPPSLRK_					0	0	0		ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B	ENSG00000213676|ENST00000375203|ATF6B	ENSG00000213676|ENST00000375203|ATF6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.2472839355469	3	405.24695	1212.71902	1.0635	0.00043097	-0.64433	-0.00026111	0.41915	0.00016986	405.2465768037405	23.434	2.4302	22.86	22.409	24.839	-0.57415					118	56	3	0	0	0	0.33562	3	1065	1042;1053;1065		65.278	11.681	1	383090			24405	8600	16442	16452	27945;27946;27947	27947					0.12117036868517062
KTTCKLKMKP	10	Unmodified	_KTTCKLKMKP_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3436279296875	2	589.343412	1176.67227	-0.40075	-0.00023618	-0.39541	-0.00023303	-0.79616	-0.00046921	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.86218	1	9050	9050		32.812	4.9302	1	4112500			24406	5333;15007	16443	16453	27948	27948					0.09100137721384272
KTTFRSSPG	9	Unmodified	_KTTFRSSPG_					0	0	0		ENST00000454715.5_1_3:196065156-196065342:-|nuORF	ENST00000454715.5_1_3:196065156-196065342:-|nuORF	ENST00000454715.5_1_3:196065156-196065342:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.76171875	2	490.761623	979.508694	1.0176	0.0004994	-1.0729	-0.00052653	-0.055295	-2.7137E-05	490.76098743641063	19.162	0.4111	19.235	19.012	19.423	0.073465					20	12	2	0	0	0	0.64922	1	367	367		44.117	1.7207	1	51389			24407	11944	16444	16454	27949	27949					0.018119992663855555
KTTGKQTHK	9	Unmodified	_KTTGKQTHK_					0	0	0		L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|78|2|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|78|2|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|78|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.798095703125	2	514.795998	1027.57744	0.83264	0.00042864	3.5304	0.0018175	4.3631	0.0022461	514.797617549485	24.143	0.43625	23.761	23.491	23.927	-0.38178					17	9	3	0	0	0	0.51592	1	1134	1134		51.193	1.7511	1	112550			24408	14561	16445	16455	27950	27950					0.06475663566061485
KTTLIIMRYL	10	Unmodified	_KTTLIIMRYL_					0	0	0		ENSG00000266028|ENST00000573034|SRGAP2	ENSG00000266028|ENST00000573034|SRGAP2	ENSG00000266028|ENST00000573034|SRGAP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.2576904296875	2	626.378309	1250.74206	0.47161	0.00029541	-2.9349	-0.0018383	-2.4633	-0.0015429	626.3763203793518	50.445	0.82433	50.495	49.896	50.72	0.0499					29	24	2	0	0	0	0.37624	1	3921	3921		36.447	36.447	1	106790			24409	8949	16446	16456	27951	27951					0.12672339661685328
KTTLIIMRYL	10	Unmodified	_KTTLIIMRYL_					0	0	0		ENSG00000266028|ENST00000573034|SRGAP2	ENSG00000266028|ENST00000573034|SRGAP2	ENSG00000266028|ENST00000573034|SRGAP2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	626.378309	1250.74206	-0.57449	-0.00035985	-0.022493	-1.4089E-05	-0.59699	-0.00037394	626.3784435643354	50.679	0.19804	50.656	50.512	50.71	-0.02343	0.064744	0.0018463	NaN	36.447	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29608			24410	8949	16446	16456							0.12672339661685328
KTTLIIMRYL	10	Unmodified	_KTTLIIMRYL_					0	0	0		ENSG00000266028|ENST00000573034|SRGAP2	ENSG00000266028|ENST00000573034|SRGAP2	ENSG00000266028|ENST00000573034|SRGAP2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	626.378309	1250.74206	0.12172	7.6246E-05	-1.2097	-0.00075775	-1.088	-0.00068151	626.377489946453	50.715	1.2016	50.623	49.888	51.09	-0.091797	0.031739	0.00035893	NaN	36.447	43	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94107			24411	8949	16446	16456							0.12672339661685328
KTTLPTLNVF	10	Unmodified	_KTTLPTLNVF_					0	0	0		ENSG00000136546|ENST00000643258|SCN7A;ENST00000424326.5_1_2:167262092-167297919:-|nuORF	ENSG00000136546|ENST00000643258|SCN7A	ENSG00000136546|ENST00000643258|SCN7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.329345703125	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86348	1	9768	9768		31.53	1.2121	1	17338000			24412	4120	16447	16457	27952	27952					0.08819158199935373
KTTPANPVG	9	Unmodified	_KTTPANPVG_					0	0	0		ENST00000478710.1_1_1:230825798-230827388:+|nuORF;nc|ENSG00000135775|Q14746-2|COG2;ENSG00000135775|ENST00000366669|COG2	ENST00000478710.1_1_1:230825798-230827388:+|nuORF	ENST00000478710.1_1_1:230825798-230827388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.7449035644531	2	442.745442	883.476331	-0.15287	-6.7681E-05	-1.1117	-0.00049222	-1.2646	-0.0005599	442.7447912211249	89.714	0.69885	89.782	89.384	90.083	0.068703					38	15	3	0	0	0	0.78528	1	9162	9162		29.17	2.4771	1	674190			24413	4053	16448	16458	27953	27953					0.029932118633723803
KTTQVKVAM	9	Unmodified	_KTTQVKVAM_					0	0	0			REV__ENSG00000115840|ENST00000422440|SLC25A12	REV__ENSG00000115840|ENST00000422440|SLC25A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	503.28704833984375	2	503.291702	1004.56885	0.80608	0.00040569	-1.1561	-0.00058185	-0.35001	-0.00017616	503.2909725186853	109.68	1.4053	109.76	109.44	110.85	0.078552					88	52	3	0	0	0	0.77244	1	11799	11799		32.812	3.6629	1	1533800	+		24414	18155	16449	16459	27954	27954					0.06674973605254308
KTTQVKVAM	9	Unmodified	_KTTQVKVAM_					0	0	0			REV__ENSG00000115840|ENST00000422440|SLC25A12	REV__ENSG00000115840|ENST00000422440|SLC25A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	503.28936767578125	2	503.291702	1004.56885	-1.6043	-0.00080741	1.2342	0.00062117	-0.37004	-0.00018624	503.29217405547223	109.68	1.349	109.69	109.36	110.71	0.0060425					102	50	3	0	0	0	0.78983	1	11715	11715		27.882	1.1893	1	1381900	+		24415	18155	16449	16459	27955	27955					0.06674973605254308
KTTTAFCPVQT	11	Unmodified	_KTTTAFCPVQT_					0	0	0			REV__ENST00000306077.4_1_3:14183553-14183841:+|nuORF	REV__ENST00000306077.4_1_3:14183553-14183841:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	598.8965454101562	2	598.802631	1195.59071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.197	1	71.326	70.826	71.826	0.12965								0	0	0	0.56276	1	6486	6486		29.551	6.0281	1		+		24416	24830	16450	16460	27956	27956					0.0007373356315838464
KTTTKAPGK	9	Unmodified	_KTTTKAPGK_					0	0	0		ENSG00000179954|ENST00000389623|SSC5D;nc|ENSG00000179954|A1L4H1-2|SSC5D	ENSG00000179954|ENST00000389623|SSC5D	ENSG00000179954|ENST00000389623|SSC5D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.28216552734375	2	466.282192	930.549831	0.154	7.1806E-05	-0.12763	-5.9511E-05	0.026368	1.2295E-05	466.28205557583243	16.377	0.26663	15.89	15.739	16.006	-0.48718					8	5	2	0	0	0	0.58668	1	125	125		47.657	3.2801	1	147320			24417	7310	16451	16461	27957	27957					0.08177760305841275
KTTTVPKT	8	Unmodified	_KTTTVPKT_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26318359375	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.87064	1	3048	3048		29.15	0	1	5350400	+		24418	20903	16452	16462	27958	27958					0.07010669040232642
KTTTVPKT	8	Unmodified	_KTTTVPKT_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2621765136719	2	438.263468	874.512382	0.037237	1.632E-05	-0.30418	-0.00013331	-0.26694	-0.00011699	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.80959	1	2131	2131		15.642	0.77694	1	10667000	+		24419	20903	16452	16462	27959	27959					0.07010669040232642
KTTYQFIAS	9	Unmodified	_KTTYQFIAS_					0	0	0		ENSG00000203734|ENST00000541398|ECT2L	ENSG00000203734|ENST00000541398|ECT2L	ENSG00000203734|ENST00000541398|ECT2L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.7791137695312	2	529.779482	1057.54441	-0.33938	-0.0001798	0.36118	0.00019135	0.0218	1.1549E-05	529.7795579963132	64.39	0.96629	64.417	63.833	64.799	0.027145					56	25	3	0	0	0	0.75725	1	6075	6075		36.447	0.82846	1	324740			24420	8392	16453	16463	27960	27960					0.017940367233677534
KTVAGKLVS	9	Unmodified	_KTVAGKLVS_					0	0	0			REV__ENST00000493328.5_1_1:35455862-35480681:-|nuORF	REV__ENST00000493328.5_1_1:35455862-35480681:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9432067871094	2	451.78711	901.559667	0.32736	0.00014789	0.68374	0.00030891	1.0111	0.0004568	451.7858400671412	53.422	0.47525	53.493	53.083	53.558	0.070713					18	13	2	0	0	0	0.20789	1	4342	4342		41.427	15.853	1	73202	+		24421	20985	16454	16464	27961	27961					0.10494948311213648
KTVAGPFPR	9	Unmodified	_KTVAGPFPR_					0	0	0			REV__ENSG00000138829|ENST00000262464|FBN2	REV__ENSG00000138829|ENST00000262464|FBN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.7843322753906	2	486.784902	971.55525	0.78991	0.00038451	-2.0779	-0.0010115	-1.288	-0.00062697	486.78362167873246	103.7	0.73141	103.82	103.51	104.24	0.11685					34	17	3	0	0	0	0.78124	1	10988	10988		30.318	0.47618	1	296710	+		24422	19511	16455	16465	27962	27962					0.06833483888306091
KTVAGPFPR	9	Unmodified	_KTVAGPFPR_					0	0	0			REV__ENSG00000138829|ENST00000262464|FBN2	REV__ENSG00000138829|ENST00000262464|FBN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	486.784902	971.55525	-0.69245	-0.00033708	-0.52752	-0.00025679	-1.22	-0.00059386	486.7844177390526	103.56	0.5684	103.74	103.58	104.15	0.18298	-0.055795	0.0002079	NaN	30.318	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	342840	+		24423	19511	16455	16465							0.06833483888306091
KTVAGPFPR	9	Unmodified	_KTVAGPFPR_					0	0	0			REV__ENSG00000138829|ENST00000262464|FBN2	REV__ENSG00000138829|ENST00000262464|FBN2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	486.784902	971.55525	0.78991	0.00038451	-2.0779	-0.0010115	-1.288	-0.00062697	486.78362167873246	103.7	0.73141	103.82	103.51	104.24	0.11685	0.022444	-0.0013015	NaN	30.318	34	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	296710	+		24424	19511	16455	16465							0.06833483888306091
KTVAGPFPR	9	Unmodified	_KTVAGPFPR_					0	0	0			REV__ENSG00000138829|ENST00000262464|FBN2	REV__ENSG00000138829|ENST00000262464|FBN2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	486.784902	971.55525	-1.658	-0.00080709	0.33364	0.00016241	-1.3244	-0.00064467	486.78485160935173	103.72	0.67829	103.83	103.57	104.25	0.11494	0.033351	0.0010463	NaN	30.318	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	305700	+		24425	19511	16455	16465							0.06833483888306091
KTVARQAHEEE	11	Unmodified	_KTVARQAHEEE_					0	0	0			REV__ENSG00000137825|ENST00000260386|ITPKA	REV__ENSG00000137825|ENST00000260386|ITPKA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.2227783203125	3	433.221352	1296.64223	0.63159	0.00027362	2.3174	0.001004	2.949	0.0012776	433.22224808643284	61.796	0.94312	61.826	61.454	62.397	0.029575					63	25	3	0	0	0	0.75779	1	5790	5790		20.315	0	1	1002700	+		24426	19414	16456	16466	27963	27963					0.005771935814436802
KTVDLVTPLC	10	Unmodified	_KTVDLVTPLC_					0	0	0		ENST00000450873.6_2_7:66205752-66233907:+|nuORF	ENST00000450873.6_2_7:66205752-66233907:+|nuORF	ENST00000450873.6_2_7:66205752-66233907:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	544.8048095703125	2	544.804642	1087.59473	0.78335	0.00042678	2.7478	0.001497	3.5312	0.0019238	544.8060162221166	24.686	0.87633	24.7	24.336	25.212	0.013996					110	42	4	0	0	0	0.86225	1	881	881		32.751	2.2469	1	1007500			24427	11896	16457	16467	27964	27964					0.05443823056884867
KTVEEALTIKN	11	Unmodified	_KTVEEALTIKN_					0	0	0		ENST00000539580.5_1_12:108957892-108961477:+|nuORF;nc|ENSG00000136003|Q9H1K1-2|ISCU;ENSG00000136003|ENST00000311893|ISCU	ENST00000539580.5_1_12:108957892-108961477:+|nuORF	ENST00000539580.5_1_12:108957892-108961477:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.3036193847656	3	415.906482	1244.69762	-0.20831	-8.6636E-05	3.06	0.0012727	2.8517	0.001186	415.9071620343916	68.84	0.16788	69.386	69.282	69.45	0.54693					5	3	2	0	0	0	0.17281	1	7599	7599		30.139	7.5595	1	27631			24428	4079	16458	16468	27965	27965					0.08505607049187347
KTVEVKPGM	9	Unmodified	_KTVEVKPGM_					0	0	0		nc|ENSG00000005339|Q92793-2|CREBBP;ENSG00000005339|ENST00000262367|CREBBP;ENSG00000100393|ENST00000263253|EP300	nc|ENSG00000005339|Q92793-2|CREBBP	nc|ENSG00000005339|Q92793-2|CREBBP	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.78033447265625	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.699	1	83.846	83.346	84.346	0.14694								0	0	0	0.32292	1	8119	8119		22.58	2.0978	1				24429	681	16459	16469	27966	27966					0.0480328471392113
KTVEVPTYD	9	Unmodified	_KTVEVPTYD_					0	0	0		nc|ENSG00000130717|Q9HA47-2|UCK1;ENST00000459858.1_1_9:134404461-134406630:-|nuORF;nc|ENSG00000130717|Q9HA47-3|UCK1;ENSG00000130717|ENST00000372215|UCK1;nc|ENSG00000130717|Q9HA47-4|UCK1	nc|ENSG00000130717|Q9HA47-2|UCK1	nc|ENSG00000130717|Q9HA47-2|UCK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.2973022460938	2	526.268947	1050.52334	-0.22478	-0.00011829	0.10106	5.3183E-05	-0.12372	-6.5111E-05	526.2688296719842	56.992	0.85995	57.388	57.072	57.932	0.39672					40	20	3	0	0	0	0.20789	1	5984	5984		39.253	5.7372	1	625590			24430	3671	16460	16470	27967	27967					0.00010026623863268469
KTVGKLTATQ	10	Unmodified	_KTVGKLTATQ_					0	0	0		ENSG00000115084|ENST00000245680|SLC35F5;ENST00000460863.1_1_2:114500256-114501404:-|nuORF;nc|ENSG00000115084|Q8WV83-2|SLC35F5;ENST00000498768.1_1_2:114500256-114514010:-|nuORF	ENSG00000115084|ENST00000245680|SLC35F5	ENSG00000115084|ENST00000245680|SLC35F5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8132934570312	2	523.813856	1045.61316	0.95438	0.00049992	-0.97519	-0.00051082	-0.02081	-1.0901E-05	523.8133160664315	24.781	0.63198	24.452	24.206	24.838	-0.32825					31	13	3	0	0	0	0.60985	1	1237	1237		49.536	9.4779	1	215120			24431	2811	16461	16471	27968	27968					0.0921770102308983
KTVGKLTATQ	10	Unmodified	_KTVGKLTATQ_					0	0	0		ENSG00000115084|ENST00000245680|SLC35F5;ENST00000460863.1_1_2:114500256-114501404:-|nuORF;nc|ENSG00000115084|Q8WV83-2|SLC35F5;ENST00000498768.1_1_2:114500256-114514010:-|nuORF	ENSG00000115084|ENST00000245680|SLC35F5	ENSG00000115084|ENST00000245680|SLC35F5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	523.813856	1045.61316	0.13649	7.1496E-05	3.3316	0.0017451	3.4681	0.0018166	523.8164846485159	24.302	0.10256	24.403	24.319	24.421	0.10045	0.031727	0.0027724	NaN	49.536	8	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18831			24432	2811	16461	16471							0.0921770102308983
KTVHGLPQ	8	Unmodified	_KTVHGLPQ_					0	0	0			REV__nc|ENSG00000137804|Q9BXS6-4|NUSAP1	REV__nc|ENSG00000137804|Q9BXS6-4|NUSAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.25445556640625	2	440.255977	878.497401	0.25826	0.0001137	-1.4885	-0.00065531	-1.2302	-0.00054161	440.2551628141125	62.575	1.3839	63.129	62.257	63.641	0.5545					72	31	3	0	0	0	0.86677	1	6780	6780		27.882	2.4321	1	690880	+		24433	19406	16462	16472	27969	27969					0.05329221962904285
KTVKENWKNL	10	Unmodified	_KTVKENWKNL_					0	0	0		ENST00000373899.3_1_10:60146421-60154831:+|nuORF;nc|ENSG00000108064|Q00059-2|TFAM;ENSG00000108064|ENST00000487519|TFAM	ENST00000373899.3_1_10:60146421-60154831:+|nuORF	ENST00000373899.3_1_10:60146421-60154831:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.5745544433594	3	420.575067	1258.70337	-0.87872	-0.00036957	1.7212	0.00072391	0.84251	0.00035434	420.57568384090274	46.88	0.74535	46.852	46.55	47.295	-0.027752					51	18	4	0	0	0	0.86549	1	3923	3923		29.551	3.659	1	789730			24434	2391	16463	16473	27970	27970					0.08436750351506817
KTVKKEYTPF	10	Unmodified	_KTVKKEYTPF_					0	0	0		ENSG00000111615|ENST00000229214|KRR1	ENSG00000111615|ENST00000229214|KRR1	ENSG00000111615|ENST00000229214|KRR1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.93243408203125	3	414.236051	1239.68632	-1.1083	-0.00045908	0.15325	6.3482E-05	-0.95501	-0.0003956	414.23597139746	43.669	0.62689	43.633	43.362	43.989	-0.035816					33	14	3	0	0	0	0.37624	1	3466	3466		20.837	6.7	1	212770			24435	2589	16464	16474	27971	27971					0.07606829745691357
KTVKKTLE	8	Unmodified	_KTVKKTLE_					0	0	0		nc|ENSG00000176406|Q9UQ26-3|RIMS2;nc|ENSG00000176406|Q9UQ26-1|RIMS2;nc|ENSG00000176406|Q9UQ26-8|RIMS2;nc|ENSG00000176406|Q9UQ26|RIMS2;ENSG00000176406|ENST00000696799|RIMS2;nc|ENSG00000176406|Q9UQ26-2|RIMS2	nc|ENSG00000176406|Q9UQ26-3|RIMS2	nc|ENSG00000176406|Q9UQ26-3|RIMS2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.9708251953125	2	473.800217	945.585882	-0.70164	-0.00033244	-1.1776	-0.00055793	-1.8792	-0.00089037	473.7995648728008	49.672	0.53242	49.648	49.323	49.855	-0.024033					17	11	2	0	0	0	0.4196	1	4261	4261		40.778	18.818	1	76335			24436	7079	16465	16475	27972	27972					0.1109121748271491
KTVKLGDVQ	9	Unmodified	_KTVKLGDVQ_					0	0	0			REV__ENSG00000129566|ENST00000262715|TEP1	REV__ENSG00000129566|ENST00000262715|TEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.2960510253906	2	494.295299	986.576045	-1.0016	-0.00049509	0.028471	1.4073E-05	-0.97314	-0.00048102	494.2954686707883	22.165	0.22914	22.108	21.962	22.191	-0.057203					14	9	2	0	0	0	0.70638	1	660	660		40.058	0	1	27477	+		24437	18826	16466	16476	27973	27973					0.08222029477337855
KTVKLGDVQ	9	Unmodified	_KTVKLGDVQ_					0	0	0			REV__ENSG00000129566|ENST00000262715|TEP1	REV__ENSG00000129566|ENST00000262715|TEP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	494.295299	986.576045	-0.72661	-0.00035916	0.52108	0.00025757	-0.20553	-0.00010159	494.29536300698066	22.111	0.66178	22.159	21.902	22.564	0.048555	0.089584	0.00074132	NaN	40.058	41	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80662	+		24438	18826	16466	16476							0.08222029477337855
KTVKLGDVQ	9	Unmodified	_KTVKLGDVQ_					0	0	0			REV__ENSG00000129566|ENST00000262715|TEP1	REV__ENSG00000129566|ENST00000262715|TEP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	494.295299	986.576045	0.08557	4.2297E-05	-0.9099	-0.00044976	-0.82433	-0.00040746	494.2950889164432	21.884	0.48065	21.965	21.738	22.218	0.081615	-0.10426	-0.00067333	NaN	40.058	39	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109470	+		24439	18826	16466	16476							0.08222029477337855
KTVKLGDVQ	9	Unmodified	_KTVKLGDVQ_					0	0	0			REV__ENSG00000129566|ENST00000262715|TEP1	REV__ENSG00000129566|ENST00000262715|TEP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	494.295299	986.576045	0.71521	0.00035352	-0.20814	-0.00010288	0.50707	0.00025064	494.2951324034074	21.984	0.48855	21.975	21.823	22.312	-0.0088234	-0.09476	2.0425E-05	NaN	40.058	40	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107400	+		24440	18826	16466	16476							0.08222029477337855
KTVKLGDVQ	9	Unmodified	_KTVKLGDVQ_					0	0	0			REV__ENSG00000129566|ENST00000262715|TEP1	REV__ENSG00000129566|ENST00000262715|TEP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	494.295299	986.576045	0.27802	0.00013742	-5.2586	-0.0025993	-4.9806	-0.0024619	494.2930625544549	22.752	0.30764	22.141	21.99	22.298	-0.6107	0.071169	-0.0049724	NaN	40.058	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49698	+		24441	18826	16466	16476							0.08222029477337855
KTVKMVIPALI	11	Unmodified	_KTVKMVIPALI_					0	0	0		ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.24847412109375	3	404.929794	1211.76755	1.6547	0.00067003	1.8915	0.00076594	3.5462	0.001436	404.93046440899104	23.908	0.56162	23.526	23.365	23.927	-0.38178					21	12	2	0	0	0	0.17368	1	1099	1099		42.338	32.234	1	143760			24442	3059	16467	16477	27974	27974					0.17013814184110743
KTVKMVIPALI	11	Unmodified	_KTVKMVIPALI_					0	0	0		ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	404.929794	1211.76755	0.034348	1.3909E-05	-2.9724	-0.0012036	-2.9381	-0.0011897	405.2639530584262	23.19	0.074993	23.282	23.222	23.297	0.09222	-0.071287	-0.0055005	NaN	42.338	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45336			24443	3059	16467	16477							0.17013814184110743
KTVKPGRDEP	10	Unmodified	_KTVKPGRDEP_					0	0	0		ENSG00000115604|ENST00000233957|IL18R1	ENSG00000115604|ENST00000233957|IL18R1	ENSG00000115604|ENST00000233957|IL18R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.8170166015625	2	563.814387	1125.61422	0.4108	0.00023161	4.4343	0.0025001	4.845	0.0027317	563.8167084474933	53.74	1.0262	53.763	53.411	54.438	0.022541					39	28	2	0	0	0	0.76096	1	4744	4744		41.427	4.2675	1	133250			24444	2861	16468	16478	27975	27975					0.0564391539198823
KTVKRKTHR	9	Unmodified	_KTVKRKTHR_					0	0	0		ENST00000475185.5_1_18:20877812-20889646:-|nuORF	ENST00000475185.5_1_18:20877812-20889646:-|nuORF	ENST00000475185.5_1_18:20877812-20889646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	577.3671264648438	2	577.367456	1152.72036	0.87834	0.00050713	-2.6389	-0.0015236	-1.7606	-0.0010165	577.3658132315567	102.16	3.1638	102.3	101.85	105.01	0.13522					236	78	5	0	0	0	0.7932	2	10847	10847;10916		25.574	4.6271	1	15036000			24445	12319	16469	16479	27976;27977	27976					0.15010715747962422
KTVKVKSKN	9	Unmodified	_KTVKVKSKN_					0	0	0			REV__ENSG00000082269|ENST00000418814|FAM135A	REV__ENSG00000082269|ENST00000418814|FAM135A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8024291992188	2	516.332216	1030.64988	0.69791	0.00036035	2.3612	0.0012192	3.0591	0.0015795	516.8328619013871	22.999	0.19124	22.425	22.245	22.436	-0.57415					5	4	2	0	0	0	0.20789	1	975	975		25.574	0	1	24488	+		24446	16837	16470	16480	27978	27978					0.13577997639663408
KTVLILFL	8	Unmodified	_KTVLILFL_					0	0	0		ENST00000464316.5_1_3:156870794-156871031:-|nuORF	ENST00000464316.5_1_3:156870794-156871031:-|nuORF	ENST00000464316.5_1_3:156870794-156871031:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.82183837890625	2	473.820421	945.62629	-0.98767	-0.00046798	3.7415	0.0017728	2.7538	0.0013048	473.8221193473481	37.753	0.93203	37.703	37.184	38.117	-0.050369					38	20	2	0	0	0	0.80706	1	2612	2612		19.36	4.6959	1	80539			24447	12088	16471	16481	27979	27979					0.1513018387312286
KTVLIPPE	8	Unmodified	_KTVLIPPE_					0	0	0		nc|ENSG00000152763|Q5VTH9-2|DNAI4;ENSG00000152763|ENST00000371026|DNAI4	nc|ENSG00000152763|Q5VTH9-2|DNAI4	nc|ENSG00000152763|Q5VTH9-2|DNAI4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.7777404785156	2	448.776211	895.537869	-0.14536	-6.5233E-05	3.3348	0.0014966	3.1895	0.0014314	448.7775328817958	67.633	0.67928	67.649	67.306	67.986	0.016205					49	29	2	0	0	0	0.8621	1	6363	6363		26.693	1.1189	1	102880			24448	5198	16472	16482	27980	27980					0.08592143562657384
KTVLIPPE	8	Unmodified	_KTVLIPPE_					0	0	0		nc|ENSG00000152763|Q5VTH9-2|DNAI4;ENSG00000152763|ENST00000371026|DNAI4	nc|ENSG00000152763|Q5VTH9-2|DNAI4	nc|ENSG00000152763|Q5VTH9-2|DNAI4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	448.776211	895.537869	0.029418	1.3202E-05	3.2658	0.0014656	3.2952	0.0014788	448.7774778659729	67.408	0.84903	67.438	67.147	67.996	0.030571	-0.06462	-0.00034542	NaN	26.693	56	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122880			24449	5198	16472	16482							0.08592143562657384
KTVLIPPE	8	Unmodified	_KTVLIPPE_					0	0	0		nc|ENSG00000152763|Q5VTH9-2|DNAI4;ENSG00000152763|ENST00000371026|DNAI4	nc|ENSG00000152763|Q5VTH9-2|DNAI4	nc|ENSG00000152763|Q5VTH9-2|DNAI4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	448.776211	895.537869	-1.3254	-0.00059482	4.5831	0.0020568	3.2577	0.001462	448.7781321373447	67.288	0.88885	67.421	67.179	68.068	0.13326	-0.081587	0.00083699	NaN	26.693	51	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122510			24450	5198	16472	16482							0.08592143562657384
KTVLTIAHRL	10	Unmodified	_KTVLTIAHRL_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.368408203125	2	576.36659	1150.71863	0.38706	0.00022309	4.0536	0.0023364	4.4407	0.0025595	576.3687857053872	46.409	2.2039	46.447	45.362	47.565	0.038181					117	60	3	0	0	0	0.86587	1	3391	3391		29.17	0.020503	1	342020			24451	3344	16473	16483	27981	27981					0.14929661939368088
KTVLVPPA	8	Unmodified	_KTVLVPPA_					0	0	0		ENST00000359362.5_2_1:236631558-236645638:+|nuORF	ENST00000359362.5_2_1:236631558-236645638:+|nuORF	ENST00000359362.5_2_1:236631558-236645638:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.766357421875	2	412.765646	823.516739	-1.9024	-0.00078523	4.0039	0.0016527	2.1015	0.00086745	412.7675544540149	40.173	1.81	40.179	39.296	41.106	0.0065002					141	57	4	0	0	0	0.86288	1	2491	2491		26.796	7.4361	1	726100			24452	10426	16474	16484	27982	27982					0.09792178253792372
KTVLVPPA	8	Unmodified	_KTVLVPPA_					0	0	0		ENST00000359362.5_2_1:236631558-236645638:+|nuORF	ENST00000359362.5_2_1:236631558-236645638:+|nuORF	ENST00000359362.5_2_1:236631558-236645638:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2666320800781	2	412.765646	823.516739	-1.8818	-0.00077676	3.6465	0.0015051	1.7646	0.00072837	412.7678046235096	51.389	1.3986	51.424	50.891	52.29	0.034584					78	43	3	0	0	0	0.89962	1	4082	4082		38.806	8.9646	1	257640			24453	10426	16474	16484	27983	27983					0.09792178253792372
KTVLVPPA	8	Unmodified	_KTVLVPPA_					0	0	0		ENST00000359362.5_2_1:236631558-236645638:+|nuORF	ENST00000359362.5_2_1:236631558-236645638:+|nuORF	ENST00000359362.5_2_1:236631558-236645638:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7669372558594	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.84341	1	2746	2746		24.203	2.5004	1	669780			24454	10426	16474	16484	27984	27984					0.09792178253792372
KTVLVPPA	8	Unmodified	_KTVLVPPA_					0	0	0		ENST00000359362.5_2_1:236631558-236645638:+|nuORF	ENST00000359362.5_2_1:236631558-236645638:+|nuORF	ENST00000359362.5_2_1:236631558-236645638:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.26690673828125	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.88915	1	2362	2362		35.201	5.3592	1	1619400			24455	10426	16474	16484	27985	27985					0.09792178253792372
KTVMSHLDRTI	11	Unmodified	_KTVMSHLDRTI_					0	0	0		ENSG00000165983|ENST00000535784|PTER	ENSG00000165983|ENST00000535784|PTER	ENSG00000165983|ENST00000535784|PTER	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	3	434.239578	1299.69691	-0.95076	-0.00041286	-0.91716	-0.00039827	-1.8679	-0.00081113	434.57325563024864	63.336	0.11685	63.359	63.285	63.401	0.022984					6	5	2	0	0	0	0.17243	1	5534	5534		22.562	0.78116	1	41032			24456	6144	16475	16485	27986	27986					0.059044891284884216
KTVNELQQL	9	Unmodified	_KTVNELQQL_					0	0	0			REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33	REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.802978515625	2	536.803488	1071.59242	0.44089	0.00023667	-0.7115	-0.00038194	-0.27062	-0.00014527	536.803069174613	26.4	1.1845	26.361	25.89	27.075	-0.038523					63	27	4	0	0	0	0.39367	1	1206	1206		58.23	1.7961	1	879030	+		24457	23220	16476	16486	27987	27987					0.05949110643427957
KTVPLLPKWK	10	Unmodified	_KTVPLLPKWK_					0	0	0			REV__ENSG00000151360|ENST00000252505|ALLC	REV__ENSG00000151360|ENST00000252505|ALLC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9244689941406	3	403.928781	1208.76451	-1.975	-0.00079776	1.8215	0.00073575	-0.15353	-6.2017E-05	403.9294096595759	43	1.2076	43.71	43.311	44.519	0.71021					95	29	4	0	0	0	0.86014	1	3934	3934		23.378	9.9239	1	4109900	+		24458	20247	16477	16487	27988	27988					0.16848307121586004
KTVQNLSKV	9	Unmodified	_KTVQNLSKV_					0	0	0		nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA;ENSG00000174197|ENST00000703841|MGA;ENST00000566288.1_1_15:42040980-42042834:+|nuORF	nc|ENSG00000174197|Q8IWI9-3|MGA	nc|ENSG00000174197|Q8IWI9-3|MGA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.8075866699219	2	508.808574	1015.60259	-1.4188	-0.00072192	-0.25381	-0.00012914	-1.6726	-0.00085106	508.8083690833738	83.198	1.9743	83.336	82.638	84.612	0.13811					103	45	4	0	0	0	0.78536	1	8031	8031		29.15	1.2673	1	3643200			24459	6914	16478	16488	27989	27989					0.09541718368666352
KTVQVVPHI	9	Unmodified	_KTVQVVPHI_					0	0	0		ENSG00000171793|ENST00000650070|CTPS1;ENSG00000047230|ENST00000359276|CTPS2	ENSG00000171793|ENST00000650070|CTPS1	ENSG00000171793|ENST00000650070|CTPS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8140869140625	2	510.813659	1019.61277	0.13633	6.964E-05	-1.697	-0.00086687	-1.5607	-0.00079723	510.812662560253	79.014	0.80726	79.425	79.014	79.822	0.41059					43	18	3	0	0	0	0.64922	1	9047	9047		44.117	4.864	1	776270			24460	6709	16479	16489	27990	27990					0.10374326093892705
KTVRANKP	8	Unmodified	_KTVRANKP_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7608947753906	2	457.282526	912.550499	-0.56074	-0.00025642	0.22554	0.00010313	-0.33521	-0.00015328	457.28242160358457	34.292	0.5038	34.294	34.057	34.561	0.0026016					17	10	2	0	0	0	0.4196	1	2102	2102		16.473	0	1	41182	+		24461	20437;29946	16480	16490	27991	27991					0.09072599745547905
KTVRSKLT	8	Unmodified	_KTVRSKLT_					0	0	0			REV__ENSG00000147647|ENST00000351513|DPYS	REV__ENSG00000147647|ENST00000351513|DPYS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.7975769042969	2	466.798009	931.581465	0.042884	2.0018E-05	-0.8518	-0.00039762	-0.80892	-0.0003776	466.79743697108887	19.196	1.0272	19.122	18.891	19.918	-0.074974					77	38	3	0	0	0	0.83646	1	398	398		12.207	0	1	152940	+		24462	20080	16481	16491	27992	27992					0.11293753059783285
KTVRVHDVSD	10	Unmodified	_KTVRVHDVSD_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3104858398438	2	578.309469	1154.60439	-0.30541	-0.00017662	2.2173	0.0012823	1.9119	0.0011057	578.3105993918314	110.37	1.6265	110.37	110.02	111.65	0					155	51	5	0	0	0	0.86348	1	11492	11492		31.53	2.3803	1	2787700	+		24463	22575	16482	16492	27993	27993					0.033267273866158575
KTVSKKKK	8	Unmodified	_KTVSKKKK_					0	0	0		AluSx1_dup69050|chr11:17076400-17076571:+|3.214587647826228|0.0023214614879023|10.44|59.0|2|1|sense;AluJb_dup105930|chr17:16441567-16441818:-|3.593945146269721|0.4201583608019265|3.1|63.0|7|2|sense	AluSx1_dup69050|chr11:17076400-17076571:+|3.214587647826228|0.0023214614879023|10.44|59.0|2|1|sense	AluSx1_dup69050|chr11:17076400-17076571:+|3.214587647826228|0.0023214614879023|10.44|59.0|2|1|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.8212890625	2	473.824027	945.633501	-1.811	-0.00085809	-2.8905	-0.0013696	-4.7015	-0.0022277	473.82255707723726	37.572	1.2199	37.572	37.042	38.262	0					48	28	3	0	0	0	0.88151	2	2286	2249;2286		7.6903	3.374	1	126770			24464	0	16483	16493	27994;27995	27995					0.15850916473561938
KTVSKKKK	8	Unmodified	_KTVSKKKK_					0	0	0		AluSx1_dup69050|chr11:17076400-17076571:+|3.214587647826228|0.0023214614879023|10.44|59.0|2|1|sense;AluJb_dup105930|chr17:16441567-16441818:-|3.593945146269721|0.4201583608019265|3.1|63.0|7|2|sense	AluSx1_dup69050|chr11:17076400-17076571:+|3.214587647826228|0.0023214614879023|10.44|59.0|2|1|sense	AluSx1_dup69050|chr11:17076400-17076571:+|3.214587647826228|0.0023214614879023|10.44|59.0|2|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.8216857910156	2	473.824027	945.633501	-2.4193	-0.0011463	-2.4814	-0.0011758	-4.9007	-0.0023221	473.8227394930318	37.704	1.2074	37.715	37.15	38.358	0.011173					47	27	2	0	0	0	0.83058	1	2529	2529		12.959	0.75233	1	72583			24465	0	16483	16493	27996	27996					0.15850916473561938
KTVTRDKVA	9	Unmodified	_KTVTRDKVA_					0	0	0		L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|41|1|sense	L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|41|1|sense	L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|41|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2693786621094	2	509.306198	1016.59784	0.9795	0.00049887	-0.65132	-0.00033172	0.32819	0.00016715	509.3059298314675	17.019	0.26148	16.408	16.305	16.567	-0.6107					11	5	3	0	0	0	0.20789	1	214	214		51.335	17.163	1	142110			24466	14533	16484	16494	27997	27997					0.09020834225884755
KTWFQNRRMKH	11	Unmodified	_KTWFQNRRMKH_					0	0	0		ENSG00000151650|ENST00000325980|VENTX;ENSG00000188909|ENST00000343035|BSX	ENSG00000151650|ENST00000325980|VENTX	ENSG00000151650|ENST00000325980|VENTX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.2788391113281	3	511.273616	1530.79902	-0.44565	-0.00022785	2.4023	0.0012282	1.9567	0.0010004	511.2749266156477	38.067	0.67049	38.084	37.889	38.56	0.016567					39	20	3	0	0	0	0.79224	1	2232	2232		12.957	0.52465	1	137450			24467	5132	16485	16495	27998	27998					0.054851999907441495
KTWFQNRRMKH	11	Unmodified	_KTWFQNRRMKH_					0	0	0		ENSG00000151650|ENST00000325980|VENTX;ENSG00000188909|ENST00000343035|BSX	ENSG00000151650|ENST00000325980|VENTX	ENSG00000151650|ENST00000325980|VENTX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.2745361328125	3	511.273616	1530.79902	0.24661	0.00012609	2.5882	0.0013233	2.8349	0.0014494	511.27500229712837	37.869	0.56712	37.964	37.701	38.268	0.094322					45	19	3	0	0	0	0.76892	1	2209	2209		17.833	1.8074	1	108360			24468	5132	16485	16495	27999	27999					0.054851999907441495
KTWKLHGL	8	Unmodified	_KTWKLHGL_					0	0	0			REV__ENSG00000141431|ENST00000269197|ASXL3	REV__ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958679199219	2	491.795269	981.575986	-2.0246	-0.0009957	2.587	0.0012723	0.56235	0.00027656	491.79643169128343	45.478	1.3283	45.474	44.66	45.989	-0.0041618					90	30	4	0	0	0	0.91005	1	3589	3589		42.474	3.6683	1	433340	+		24469	19683	16486	16496	28000	28000					0.08446074267976655
KTWKLHGL	8	Unmodified	_KTWKLHGL_					0	0	0			REV__ENSG00000141431|ENST00000269197|ASXL3	REV__ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.795654296875	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.81548	1	4268	4268		20.482	0	1	748320	+		24470	19683	16486	16496	28001	28001					0.08446074267976655
KTWKLHGL	8	Unmodified	_KTWKLHGL_					0	0	0			REV__ENSG00000141431|ENST00000269197|ASXL3	REV__ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7957763671875	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.87479	1	3716	3716		30.504	3.7075	1	1502200	+		24471	19683	16486	16496	28002	28002					0.08446074267976655
KTWKLHGL	8	Unmodified	_KTWKLHGL_					0	0	0			REV__ENSG00000141431|ENST00000269197|ASXL3	REV__ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958679199219	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.85277	1	4205	4205		25.45	2.4077	1	412030	+		24472	19683	16486	16496	28003	28003					0.08446074267976655
KTYGEIFEK	9	Unmodified	_KTYGEIFEK_					0	0	0		nc|ENSG00000151366|O95298-2|NDUFC2;ENSG00000151366|ENST00000281031|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	557.7922973632812	2	557.792589	1113.57063	0.33524	0.00018699	-0.059249	-3.3049E-05	0.27599	0.00015395	557.792381054811	37.811	0.72374	38.124	37.825	38.548	0.31312					41	18	3	0	0	0	0.094633	1	3059	3059		93.598	21.72	1	851440			24473	5111	16487	16497	28004	28004					0.01838305894852965
KTYGEIFEK	9	Unmodified	_KTYGEIFEK_					0	0	0		nc|ENSG00000151366|O95298-2|NDUFC2;ENSG00000151366|ENST00000281031|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	557.7929077148438	2	557.792589	1113.57063	0.19343	0.00010789	0.033384	1.8621E-05	0.22681	0.00012651	557.7923903658958	37.64	0.68617	38.125	37.83	38.516	0.48581					42	17	3	0	0	0	0.12394	1	3059	3059		88.177	7.7223	1	1135700			24474	5111	16487	16497	28005	28005					0.01838305894852965
KTYHALSNLPK	11	Unmodified	_KTYHALSNLPK_					0	0	0		ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.5751953125	3	424.575067	1270.70337	0.37564	0.00015949	-0.38721	-0.0001644	-0.01157	-4.9123E-06	424.5748432033641	30.952	0.6075	30.956	30.623	31.23	0.0037212					32	13	4	0	0	0	0.67824	1	2075	2075		35.077	0.99037	1	376550			24475	2425	16488	16498	28006	28006					0.07884750351490766
KTYIFANGIKL	11	Unmodified	_KTYIFANGIKL_					0	0	0			REV__ENST00000354416.7_1_X:118753384-118753732:-|nuORF	REV__ENST00000354416.7_1_X:118753384-118753732:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.878173828125	2	634.374081	1266.73361	-0.13876	-8.8026E-05	4.448	0.0028217	4.3092	0.0027337	634.3767849583303	112.54	0.33102	112.48	112.42	112.75	-0.063889					18	10	2	0	0	0	0.7144	1	12231	12231		29.17	3.596	1	250970	+		24476	25356	16489	16499	28007	28007					0.11091109016706469
KTYIPPKGETK	11	Unmodified	_KTYIPPKGETK_					0	0	0		ENST00000559968.1_1_14:68082236-68082464:+|nuORF;nc|ENSG00000124097|B2RPK0|HMGB1P1;ENSG00000189403|ENST00000341423|HMGB1	ENST00000559968.1_1_14:68082236-68082464:+|nuORF	ENST00000559968.1_1_14:68082236-68082464:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.57708740234375	3	421.243206	1260.70779	1.1529	0.00048564	-0.49828	-0.0002099	0.65459	0.00027574	421.24286811574484	21.146	2.4108	20.687	19.961	22.372	-0.4591					122	55	3	0	0	0	0.71803	1	693	693		31.722	0	1	84048			24477	8005	16490	16500	28008	28008					0.08786214774431755
KTYKSKVLQTL	11	Unmodified	_KTYKSKVLQTL_					0	0	0		ENSG00000282872|ENST00000634842|C1orf232	ENSG00000282872|ENST00000634842|C1orf232	ENSG00000282872|ENST00000634842|C1orf232	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.9342041015625	3	436.934372	1307.78129	0.27454	0.00011996	-1.2056	-0.00052675	-0.93102	-0.00040679	436.9337888157145	20.681	2.5222	20.051	19.49	22.012	-0.62961					153	62	4	0	0	0	0.74344	1	743	743		23.514	7.5937	1	646260			24478	9055	16491	16501	28009	28009					0.13970763216889281
KTYTKSSHLK	10	Unmodified	_KTYTKSSHLK_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF;ENSG00000127528|ENST00000248071|KLF2	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.335693359375	2	596.837862	1191.66117	0.73416	0.00043818	-0.62165	-0.00037102	0.11251	6.7153E-05	596.8374172163865	16.581	0.49285	16.094	15.959	16.452	-0.48718					20	10	4	0	0	0	0.50904	2	146	146;154		55.084	14.356	1	452470			24479	14941	16492	16502	28010;28011	28010					0.073007749431099
KTYTKSSHLK	10	Unmodified	_KTYTKSSHLK_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF;ENSG00000127528|ENST00000248071|KLF2	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.8375854492188	2	596.837862	1191.66117	0.17422	0.00010398	0.098387	5.8721E-05	0.27261	0.0001627	596.8378283052709	16.59	0.35754	15.992	15.832	16.189	-0.59873					18	7	4	0	0	0	0.17795	1	149	149		91.265	33.019	1	618920			24480	14941	16492	16502	28012	28012					0.073007749431099
KVADHSGQVK	10	Unmodified	_KVADHSGQVK_					0	0	0		ENSG00000188243|ENST00000682242|COMMD6;nc|ENSG00000188243|Q7Z4G1-2|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF	ENSG00000188243|ENST00000682242|COMMD6	ENSG00000188243|ENST00000682242|COMMD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.7918701171875	2	534.793455	1067.57236	0.57076	0.00030524	0.16708	8.9351E-05	0.73784	0.00039459	534.7934583164522	16.247	0.30648	15.759	15.607	15.913	-0.48718					11	6	3	0	0	0	0.23224	1	108	108		80.455	8.5771	1	98079			24481	7916	16493	16503	28013	28013					0.04127359703466027
KVADHSGQVK	10	Unmodified	_KVADHSGQVK_					0	0	0		ENSG00000188243|ENST00000682242|COMMD6;nc|ENSG00000188243|Q7Z4G1-2|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF	ENSG00000188243|ENST00000682242|COMMD6	ENSG00000188243|ENST00000682242|COMMD6	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	534.793455	1067.57236	0.10361	5.5408E-05	0.15233	8.1467E-05	0.25594	0.00013688	534.7932428250656	16.223	0.18595	15.624	15.508	15.694	-0.59873	-0.067623	-1.0307E-05	NaN	80.455	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140840			24482	7916	16493	16503							0.04127359703466027
KVADMALHY	9	Unmodified	_KVADMALHY_					0	0	0		nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-3|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF	nc|ENSG00000156261|P50990-2|CCT8	nc|ENSG00000156261|P50990-2|CCT8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.268310546875	2	524.268227	1046.5219	-0.94371	-0.00049476	-0.80439	-0.00042171	-1.7481	-0.00091647	524.2679559011215	42.548	0.65496	42.982	42.765	43.419	0.4334					30	15	3	0	0	0	0.032438	2	3796	3796;3821		116.9	31.743	1	1404000			24483	5372	16494	16504	28014;28015	28014					0.000501140541246059
KVADMALHY	9	Unmodified	_KVADMALHY_					0	0	0		nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-3|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF	nc|ENSG00000156261|P50990-2|CCT8	nc|ENSG00000156261|P50990-2|CCT8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2682495117188	2	524.268227	1046.5219	-1.6385	-0.00085901	0.31824	0.00016684	-1.3203	-0.00069217	524.268359892054	42.359	0.65334	43.057	42.81	43.463	0.69754					28	15	3	0	0	0	0.044173	2	3790	3778;3790		110.12	38.242	1	1803800			24484	5372	16494	16504	28016;28017	28017					0.000501140541246059
KVAEVLRAL	9	Unmodified	_KVAEVLRAL_					0	0	0		nc|ENSG00000180264|Q7Z7M1|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.275634765625	2	499.821484	997.628415	-1.3481	-0.0006738	-0.4149	-0.00020737	-1.763	-0.00088118	499.82133797913895	43.838	0.45451	44.611	44.542	44.996	0.7738					13	10	2	0	0	0	0.20789	1	4010	4010		30.318	0	1	187170			24485	15130	16495	16505	28018	28018					0.1295061261095043
KVAGAATPK	9	Unmodified	_KVAGAATPK_					0	0	0		ENSG00000124575|ENST00000244534|H1-3	ENSG00000124575|ENST00000244534|H1-3	ENSG00000124575|ENST00000244534|H1-3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.7584228515625	2	421.758352	841.502152	0.92416	0.00038977	-0.49711	-0.00020966	0.42705	0.00018011	421.7580084702437	17.224	0.54485	16.742	16.532	17.077	-0.48256					24	11	3	0	0	0	0.14236	1	233	233		85.161	5.7098	1	598920			24486	3345	16496	16506	28019	28019					0.07506106105665822
KVAGAATPK	9	Unmodified	_KVAGAATPK_					0	0	0		ENSG00000124575|ENST00000244534|H1-3	ENSG00000124575|ENST00000244534|H1-3	ENSG00000124575|ENST00000244534|H1-3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.7584533691406	2	421.758352	841.502152	0.40382	0.00017032	0.067723	2.8563E-05	0.47155	0.00019888	421.7582617863835	17.247	0.57471	16.636	16.429	17.003	-0.6107					26	12	3	0	0	0	0.11055	2	232	232;244		90.37	8.0648	1	661600			24487	3345	16496	16506	28020;28021	28020					0.07506106105665822
KVAHGELVGVQ	11	Unmodified	_KVAHGELVGVQ_					0	0	0		ENST00000368966.9_3_6:109615628-109650288:+|nuORF	ENST00000368966.9_3_6:109615628-109650288:+|nuORF	ENST00000368966.9_3_6:109615628-109650288:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.8235473632812	2	568.824755	1135.63496	0.98745	0.00056169	0.21391	0.00012168	1.2014	0.00068336	568.8239514059891	30.396	0.52541	30.4	30.141	30.667	0.0037193					16	11	2	0	0	0	0.55601	1	2003	2003		47.96	1.5027	1	208680			24488	10607	16497	16507	28022	28022					0.07256505771670163
KVAHGELVGVQ	11	Unmodified	_KVAHGELVGVQ_					0	0	0		ENST00000368966.9_3_6:109615628-109650288:+|nuORF	ENST00000368966.9_3_6:109615628-109650288:+|nuORF	ENST00000368966.9_3_6:109615628-109650288:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	568.824755	1135.63496	-0.95159	-0.00054129	-2.4393	-0.0013876	-3.3909	-0.0019288	568.8249405855712	30.189	0.79014	30.217	29.748	30.538	0.028618	-0.091119	-0.0013714	NaN	47.96	41	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	170970			24489	10607	16497	16507							0.07256505771670163
KVAIIRTPPKS	11	Unmodified	_KVAIIRTPPKS_					0	0	0		nc|ENSG00000078018|P11137-3|MAP2;ENSG00000078018|ENST00000682079|MAP2;nc|ENSG00000078018|P11137-2|MAP2;ENST00000473543.1_1_2:210574813-210575396:+|nuORF;ENST00000478233.1_1_2:210574813-210574990:+|nuORF;nc|ENSG00000078018|P11137-4|MAP2	nc|ENSG00000078018|P11137-3|MAP2;nc|ENSG00000078018|P11137-4|MAP2	nc|ENSG00000078018|P11137-4|MAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.928955078125	3	403.92744	1208.76049	0.25224	0.00010189	2.3681	0.00095656	2.6204	0.0010584	403.92827500047315	43.269	1.3362	43.703	43.17	44.506	0.4334					104	32	4	0	0	0	0.76384	1	3902	3902		18.966	1.7996	1	3935700			24490	1389;14783	16498	16508	28023	28023					0.16446217627867554
KVAKARNI	8	Unmodified	_KVAKARNI_					0	0	0			REV__nc|ENSG00000042832|P01266-2|TG	REV__nc|ENSG00000042832|P01266-2|TG	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.274169921875	2	450.292894	898.571235	1.6815	0.00075718	-0.70629	-0.00031804	0.97522	0.00043914	450.291987808067	92.996	0.33392	92.935	92.634	92.968	-0.061432					10	7	2	0	0	0	0.4196	1	9812	9812		3.6843	0	1	120650	+		24491	16331	16499	16509	28024	28024					0.11789190125227833
KVAKKKPE	8	Unmodified	_KVAKKKPE_					0	0	0		ENST00000421407.1_1:144606913-144617153:+|nuORF	ENST00000421407.1_1:144606913-144617153:+|nuORF	ENST00000421407.1_1:144606913-144617153:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80035400390625	2	464.302927	926.591301	-1.7488	-0.00081196	1.4517	0.00067402	-0.29708	-0.00013793	464.303686779052	45.349	0.56646	45.349	45.176	45.743	0					22	13	2	0	0	0	0.4196	1	3337	3337		17.365	5.8539	1	107090			24492	11462	16500	16510	28025	28025					0.125069410651804
KVAKNALNH	9	Unmodified	_KVAKNALNH_					0	0	0			REV__chr12:49128785-49272556|24|548.71|0.11|12.29|-|0|TUBA1B,None|1	REV__chr12:49128785-49272556|24|548.71|0.11|12.29|-|0|TUBA1B,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.79290771484375	2	497.793258	993.571963	0.033882	1.6866E-05	-0.29158	-0.00014514	-0.25769	-0.00012828	497.79294802566244	17.498	0.35384	17.015	16.761	17.115	-0.48256					16	7	3	0	0	0	0.7932	1	275	275		21.96	1.4781	1	193010	+		24493	15535	16501	16511	28026	28026					0.07491984774264893
KVAKPKKA	8	Unmodified	_KVAKPKKA_					0	0	0		ENSG00000187837|ENST00000343677|H1-2	ENSG00000187837|ENST00000343677|H1-2	ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.30023193359375	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.82419	1	6704	6704		13.775	0	1	1852500			24494	7888	16502	16512	28027	28027					0.14627262273359065
KVALHAVSR	9	Unmodified	_KVALHAVSR_					0	0	0			REV__ENST00000523612.1_1_8:142469282-142469963:+|nuORF	REV__ENST00000523612.1_1_8:142469282-142469963:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.8058776855469	2	490.803626	979.592698	0.8824	0.00043309	3.4199	0.0016785	4.3023	0.0021116	490.8050515680166	28.128	0.66595	27.873	27.587	28.253	-0.25465					35	15	4	0	0	0	0.6204	1	1701	1701		45.972	1.8554	1	298140	+		24495	28142	16503	16513	28028	28028					0.10208575153944821
KVALLIRKL	9	Unmodified	_KVALLIRKL_					0	0	0			REV__ENST00000430246.6_1_14:21730999-21731299:-|nuORF	REV__ENST00000430246.6_1_14:21730999-21731299:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3777465820312	2	527.378969	1052.74339	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.42	1	111.47	110.97	111.97	0.041832								0	0	0	0.35896	1	13479	13479		12.207	0	1		+		24496	26597	16504	16514	28029	28029					0.2191234181273103
KVALMYIVVN	10	Unmodified	_KVALMYIVVN_					0	0	0		ENST00000242728.4_1_12:26273527-26273698:-|nuORF	ENST00000242728.4_1_12:26273527-26273698:-|nuORF	ENST00000242728.4_1_12:26273527-26273698:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3397216796875	2	575.338652	1148.66275	-0.95443	-0.00054912	4.3393	0.0024966	3.3849	0.0019474	575.3409602555264	38.845	0.98347	38.797	38.42	39.404	-0.047005					49	22	3	0	0	0	0.4892	1	2739	2739		56.721	8.7615	1	284350			24497	9255	16505	16515	28030	28030					0.09436692707527072
KVANIILSY	9	Unmodified	_KVANIILSY_					0	0	0		nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11;ENSG00000104133|ENST00000261866|SPG11	nc|ENSG00000104133|Q96JI7-2|SPG11	nc|ENSG00000104133|Q96JI7-2|SPG11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8077697753906	2	510.808042	1019.60153	-0.73645	-0.00037618	0.68014	0.00034742	-0.056305	-2.8761E-05	510.8082934270074	59.191	2.0163	59.584	59.024	61.04	0.39209					108	51	4	0	0	0	1.3186E-13	6	6204	6192;6204;6216;6228;6240;6252		171.38	76.007	1	5833600			24498	2116	16506	16516	28031;28032;28033;28034;28035;28036	28032					0.09251503999757915
KVANIILSY	9	Unmodified	_KVANIILSY_					0	0	0		nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11;ENSG00000104133|ENST00000261866|SPG11	nc|ENSG00000104133|Q96JI7-2|SPG11	nc|ENSG00000104133|Q96JI7-2|SPG11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.80767822265625	2	510.808042	1019.60153	0.27961	0.00014283	-0.44032	-0.00022492	-0.16071	-8.2092E-05	510.8077099977189	59.078	1.6124	59.631	59.172	60.785	0.55323					90	41	3	0	0	0	1.3186E-13	6	6234	6200;6212;6223;6234;6247;6259		171.38	59.737	1	5552900			24499	2116	16506	16516	28037;28038;28039;28040;28041;28042	28040					0.09251503999757915
KVAPAPAVVK	10	Unmodified	_KVAPAPAVVK_					0	0	0		ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF;ENSG00000148303|ENST00000323345|RPL7A	ENST00000424041.1_1_20:36073469-36073910:-|nuORF	ENST00000424041.1_1_20:36073469-36073910:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.31756591796875	2	490.318577	978.622602	1.4872	0.0007292	-1.5625	-0.00076613	-0.075313	-3.6927E-05	490.31761329000466	27.162	1.1315	26.822	26.458	27.59	-0.34035					63	25	4	0	0	0	0.35939	1	1533	1533		67.494	14.142	1	1276800			24500	4946	16507	16517	28043	28043					0.1324351409926976
KVAQATKP	8	Unmodified	_KVAQATKP_					0	0	0		ENSG00000170748|ENST00000306904|RBMXL2	ENSG00000170748|ENST00000306904|RBMXL2	ENSG00000170748|ENST00000306904|RBMXL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.7581481933594	2	421.758352	841.502152	0.92416	0.00038977	-0.49711	-0.00020966	0.42705	0.00018011	421.7580084702437	17.224	0.54485	16.742	16.532	17.077	-0.48256					24	11	3	0	0	0	0.83456	1	222	222		60.972	7.6205	1	598920			24501	6611	16508	16518	28044	28044					0.07506106105665822
KVARTHAS	8	Unmodified	_KVARTHAS_					0	0	0			REV__ENSG00000168497|ENST00000304141|CAVIN2	REV__ENSG00000168497|ENST00000304141|CAVIN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516174316406	2	435.251226	868.487899	-0.16621	-7.2343E-05	0.40306	0.00017543	0.23685	0.00010309	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.85277	1	7543	7543		25.45	1.2474	1	768200	+		24502	21493	16509	16519	28045	28045					0.04839453677379879
KVARTHAS	8	Unmodified	_KVARTHAS_					0	0	0			REV__ENSG00000168497|ENST00000304141|CAVIN2	REV__ENSG00000168497|ENST00000304141|CAVIN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25189208984375	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87479	1	8186	8186		30.504	1.3541	1	2823900	+		24503	21493	16509	16519	28046	28046					0.04839453677379879
KVARTHAS	8	Unmodified	_KVARTHAS_					0	0	0			REV__ENSG00000168497|ENST00000304141|CAVIN2	REV__ENSG00000168497|ENST00000304141|CAVIN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2519836425781	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.884	1	8944	8944		33.516	1.5607	1	2020200	+		24504	21493	16509	16519	28047	28047					0.04839453677379879
KVATDESLDP	10	Unmodified	_KVATDESLDP_					0	0	0			REV__ENST00000433871.5_1_3:10059556-10065317:-|nuORF	REV__ENST00000433871.5_1_3:10059556-10065317:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.7698364257812	2	537.769311	1073.52407	0.2234	0.00012014	0.26948	0.00014492	0.49287	0.00026505	537.7692334658091	24.754	0.76684	24.426	24.116	24.883	-0.32825					45	16	4	0	0	0	0.85934	1	1256	1256		35.618	1.4457	1	482240	+		24505	26658	16510	16520	28048	28048					-0.009751787270943169
KVATHTKS	8	Unmodified	_KVATHTKS_					0	0	0			REV__nc|ENSG00000116984|Q99707-2|MTR	REV__nc|ENSG00000116984|Q99707-2|MTR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.2548828125	2	436.253434	870.492316	2.1857	0.00095352	1.2941	0.00056457	3.4798	0.0015181	436.2538705634068	114.35	2.7328	114.38	114.11	116.84	0.026459					117	82	2	0	0	0	0.89043	1	12567	12567		35.618	2.1027	1	78531	+		24506	18237	16511	16521	28049	28049					0.05188918100270712
KVATQERNPQ	10	Unmodified	_KVATQERNPQ_					0	0	0		ENSG00000159496|ENST00000290691|RGL4;nc|ENSG00000159496|Q8IZJ4-2|RGL4	ENSG00000159496|ENST00000290691|RGL4	ENSG00000159496|ENST00000290691|RGL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.81591796875	2	585.814919	1169.61528	1.7079	0.0010005	-4.051	-0.0023731	-2.3431	-0.0013726	585.8124744284027	99.501	1.3813	99.864	99.37	100.75	0.36292					85	34	3	0	0	0	0.73395	1	12064	12064		42.864	0.46813	1	650750			24507	5534	16512	16522	28050	28050					0.037261297608893074
KVATTFGK	8	Unmodified	_KVATTFGK_					0	0	0			REV__nc|ENSG00000160216|Q9NRZ7-2|AGPAT3	REV__nc|ENSG00000160216|Q9NRZ7-2|AGPAT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2527770996094	2	426.252903	850.491253	0.75303	0.00032098	-0.10006	-4.265E-05	0.65298	0.00027833	426.2527624280744	17.659	0.47475	17.176	16.944	17.419	-0.48256					17	10	2	0	0	0	0.91472	1	286	286		44.117	0	1	159580	+		24508	20703	16513	16523	28051	28051					0.06002703731383008
KVATVTLGS	9	Unmodified	_KVATVTLGS_					0	0	0			REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2635803222656	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.7932	1	2902	2902		25.574	5.5773	1	21381000	+		24509	29779	16514	16524	28052	28052					0.07010669040244011
KVCILTLPG	9	Unmodified	_KVCILTLPG_					0	0	0		ENST00000227507.2_1_11:69467203-69467281:+|nuORF	ENST00000227507.2_1_11:69467203-69467281:+|nuORF	ENST00000227507.2_1_11:69467203-69467281:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7894287109375	2	472.285889	942.557224	2.1469	0.001014	2.0105	0.00094952	4.1574	0.0019635	472.2867264071782	114.66	1.2655	114.67	114.37	115.64	0.0094528					102	61	2	0	0	0	0.7932	1	13851	13851		17.365	2.5001	1	83672			24510	9199	16515	16525	28053	28053					0.08364776581925071
KVCKLRLP	8	Unmodified	_KVCKLRLP_					0	0	0			REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8050842285156	2	478.807322	955.600092	-2.669	-0.0012779	-0.055798	-2.6716E-05	-2.7248	-0.0013047	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.85277	1	2858	2858		25.45	6.0902	1	370420	+		24511	22914	16516	16526	28054	28054					0.12051591429997188
KVCKLRLPDK	10	Unmodified	_KVCKLRLPDK_					0	0	0			REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.5807800292969	3	400.581276	1198.722	-1.9294	-0.00077288	0.34825	0.0001395	-1.5811	-0.00063337	400.5812185024314	112.11	1.0204	112.09	111.8	112.82	-0.019882					97	31	4	0	0	0	0.85441	1	12040	12040		20.837	0	1	9176900	+		24512	22914	16517	16527	28055	28055					0.1305858872169665
KVCKVKVAH	9	Unmodified	_KVCKVKVAH_					0	0	0		ENST00000464839.5_1_1:89572660-89573750:-|nuORF	ENST00000464839.5_1_1:89572660-89573750:-|nuORF	ENST00000464839.5_1_1:89572660-89573750:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3086242675781	2	506.310229	1010.60591	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.256	1	43.313	42.813	43.813	0.056744								0	0	0	0.31828	1	2970	2970		24.203	2.2429	1				24513	12098	16518	16528	28056	28056					0.1010268994167518
KVCKVKVAH	9	Unmodified	_KVCKVKVAH_					0	0	0		ENST00000464839.5_1_1:89572660-89573750:-|nuORF	ENST00000464839.5_1_1:89572660-89573750:-|nuORF	ENST00000464839.5_1_1:89572660-89573750:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3086853027344	2	506.310229	1010.60591	-0.22502	-0.00011393	-2.4987	-0.0012651	-2.7237	-0.001379	506.3089485725691	49.441	1.8113	49.348	48.371	50.182	-0.093182					75	43	2	0	0	0	0.7932	1	3896	3896		16.473	1.6083	1	253850			24514	12098	16518	16528	28057	28057					0.1010268994167518
KVCKVKVAH	9	Unmodified	_KVCKVKVAH_					0	0	0		ENST00000464839.5_1_1:89572660-89573750:-|nuORF	ENST00000464839.5_1_1:89572660-89573750:-|nuORF	ENST00000464839.5_1_1:89572660-89573750:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.30816650390625	2	506.310229	1010.60591	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.596	1	52.522	52.022	53.022	-0.074509								0	0	0	0.31828	1	4254	4254		24.203	1.1603	1				24515	12098	16518	16528	28058	28058					0.1010268994167518
KVDDRHASVN	10	Unmodified	_KVDDRHASVN_					0	0	0			REV__nc|ENSG00000198053|P78324-4|SIRPA;REV__ENST00000448467.1_1_22:30939341-30940067:+|nuORF;REV__nc|ENSG00000101307|Q5TFQ8|SIRPB1	REV__nc|ENSG00000198053|P78324-4|SIRPA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.7787475585938	2	570.791444	1139.56833	-0.80378	-0.00045879	-3.3301	-0.0019008	-4.1339	-0.0023596	571.2899951096417	56.991	0.3775	57.388	57.16	57.537	0.39672					10	8	2	0	0	0	0.37624	1	5907	5907		31.634	0.10446	1	135890			24516	23294;26840;29744	16519	16529	28059	28059					0.004132702097649599
KVDELLMEL	9	Unmodified	_KVDELLMEL_					0	0	0			REV__nc|ENSG00000162641|Q5T1N1-3|AKNAD1	REV__nc|ENSG00000162641|Q5T1N1-3|AKNAD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.1624755859375	2	545.29665	1088.57875	-0.96676	-0.00052717	2.5191	0.0013737	1.5524	0.00084649	545.2987471136945	46.074	0.67841	46.969	46.567	47.246	0.89542					31	16	3	0	0	0	0.20789	1	4283	4283		35.618	1.4457	1	328130	+		24517	15408	16520	16530	28060	28060					0.038001168199798485
KVDFFIRNSE	10	Unmodified	_KVDFFIRNSE_					0	0	0		ENSG00000162669|ENST00000370425|HFM1	ENSG00000162669|ENST00000370425|HFM1	ENSG00000162669|ENST00000370425|HFM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.9155578613281	3	418.887422	1253.64044	0.31382	0.00013145	-2.6967	-0.0011296	-2.3829	-0.00099817	418.8861740393486	31.016	0.43303	31.02	30.884	31.317	0.0037212					11	9	2	0	0	0	0.37624	1	2071	2071		24.232	0	1	63699			24518	5715	16521	16531	28061	28061					0.02376184563490824
KVDGRVVEPK	10	Unmodified	_KVDGRVVEPK_					0	0	0		ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3;ENSG00000170144|ENST00000392524|HNRNPA3	ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENST00000472163.1_1_3:75263799-75264780:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.8321533203125	2	563.83258	1125.65061	1.1189	0.00063088	-1.0374	-0.00058491	0.081525	4.5967E-05	563.8318646992443	22.052	0.8838	21.609	21.235	22.119	-0.44324					49	19	3	0	0	0	0.18739	2	868	857;868		89.029	8.5742	1	572300			24519	12258	16522	16532	28062;28063	28063					0.09280792288700468
KVDGRVVEPK	10	Unmodified	_KVDGRVVEPK_					0	0	0		ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3;ENSG00000170144|ENST00000392524|HNRNPA3	ENST00000472163.1_1_3:75263799-75264780:+|nuORF	ENST00000472163.1_1_3:75263799-75264780:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.832763671875	2	563.83258	1125.65061	0.5245	0.00029573	-0.43318	-0.00024424	0.091322	5.149E-05	563.8322356707472	22.223	0.74319	21.612	21.332	22.076	-0.6107					51	18	4	0	0	0	0.045977	3	875	875;886;896		109.48	19.109	1	883290			24520	12258	16522	16532	28064;28065;28066	28064					0.09280792288700468
KVDLLAPMI	9	Unmodified	_KVDLLAPMI_					0	0	0		ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.79644775390625	2	500.298996	998.583439	0.74629	0.00037337	0.67279	0.0003366	1.4191	0.00070996	500.7972119176855	94.338	1.2646	94.502	94.087	95.351	0.16308					81	30	5	0	0	0	0.77546	1	9623	9623		31.955	1.4512	1	626530			24521	7667	16523	16533	28067	28067					0.08409045753398914
KVDLQQVTIIP	11	Unmodified	_KVDLQQVTIIP_					0	0	0		ENSG00000154479|ENST00000447353|CFAP210	ENSG00000154479|ENST00000447353|CFAP210	ENSG00000154479|ENST00000447353|CFAP210	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8839721679688	2	627.37682	1252.73909	6.5881	0.0041332	2.3069	0.0014473	8.8949	0.0055805	627.3780077284683	111.53	0.81311	111.58	110.9	111.71	0.04509					59	29	3	0	0	0	0.70737	1	13536	13536		30.318	1.1477	1	12238000			24522	5280	16524	16534	28068	28068					0.12282787808521789
KVDSDLADY	9	Unmodified	_KVDSDLADY_					0	0	0		nc|ENSG00000148384|Q9NRR6-2|INPP5E;ENSG00000148384|ENST00000371712|INPP5E	nc|ENSG00000148384|Q9NRR6-2|INPP5E	nc|ENSG00000148384|Q9NRR6-2|INPP5E	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8369750976562	2	513.242929	1024.47131	0.53806	0.00027615	-3.5612	-0.0018277	-3.0231	-0.0015516	513.2396736758328	18.515	0.39514	17.894	17.631	18.026	-0.62141					10	8	2	0	0	0	0.20789	1	387	387		30.504	3.7075	1	28425			24523	4958	16525	16535	28069	28069					-0.03995136789922071
KVDSTVKV	8	Unmodified	_KVDSTVKV_					0	0	0		nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26312255859375	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.88185	1	2661	2661		32.812	1.2826	1	21381000			24524	2362	16526	16536	28070	28070					0.07010669040244011
KVDTKKIE	8	Unmodified	_KVDTKKIE_					0	0	0			REV__nc|ENSG00000164107|P61296-2|HAND2	REV__nc|ENSG00000164107|P61296-2|HAND2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.7903137207031	2	480.78985	959.565146	0.21791	0.00010477	-0.052983	-2.5474E-05	0.16493	7.9295E-05	480.7896908578666	23.28	0.49775	22.705	22.467	22.965	-0.57415					18	11	2	0	0	0	0.89679	1	1038	1038		37.812	0	1	135240	+		24525	21033	16527	16537	28071	28071					0.08374627103034982
KVDTSKVK	8	Unmodified	_KVDTSKVK_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7555236816406	2	452.776742	903.538931	-0.65877	-0.00029827	-0.16213	-7.3409E-05	-0.8209	-0.00037168	452.77661499718903	45.332	0.76619	46.228	45.76	46.526	0.89542					28	18	2	0	0	0	0.4196	1	4256	4256		10.265	0	1	737630	+		24526	24039	16528	16538	28072	28072					0.08330357931561139
KVDWLTSF	8	Unmodified	_KVDWLTSF_					0	0	0			REV__ENST00000322831.6_1_9:37126888-37186735:+|nuORF	REV__ENST00000322831.6_1_9:37126888-37186735:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7955322265625	2	498.263468	994.512382	-0.81165	-0.00040442	-3.9524	-0.0019693	-4.7641	-0.0023738	498.2613781187081	46.065	0.39488	46.961	46.728	47.123	0.89542					18	9	3	0	0	0	0.4196	1	4349	4349		17.365	0	1	276980	+		24527	25026	16529	16539	28073	28073					0.014906690402199274
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.57476806640625	3	403.575178	1207.70371	-0.18746	-7.5654E-05	-0.52947	-0.00021368	-0.71693	-0.00028934	403.57480473047985	82.306	1.7649	82.372	81.231	82.996	0.065918					98	40	4	0	0	0	0.69342	2	8126	8115;8126		45.022	12.382	1	480930			24528	2747	16530	16540	28074;28075	28075					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.5746154785156	3	403.575178	1207.70371	-0.18737	-7.5617E-05	-0.57957	-0.0002339	-0.76694	-0.00030952	403.57484210158276	83.445	2.2034	83.512	82.913	85.116	0.066719					120	50	3	0	0	0	0.5442	4	8306	8247;8270;8280;8306		53.089	17.937	1	281940			24529	2747	16530	16540	28076;28077;28078;28079	28079					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.57470703125	3	403.575178	1207.70371	0.45838	0.00018499	-1.3766	-0.00055558	-0.91825	-0.00037058	403.5745157078723	82.548	1.6567	82.482	81.51	83.166	-0.066185					95	38	3	0	0	0	0.5442	2	8364	8364;8375		53.089	7.514	1	406480			24530	2747	16530	16540	28080;28081	28080					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.57464599609375	3	403.575178	1207.70371	0.62042	0.00025038	-1.5074	-0.00060836	-0.887	-0.00035797	403.5745077021451	83.731	2.4581	83.662	83.085	85.543	-0.069313					131	56	3	0	0	0	0.74383	2	8544	8497;8544		42.338	11.769	1	315140			24531	2747	16530	16540	28082;28083	28083					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.5748596191406	3	403.575178	1207.70371	2.802	0.0011308	-3.6279	-0.0014641	-0.82598	-0.00033334	403.5736497882377	83.618	2.5639	83.677	83.026	85.59	0.059258					112	58	3	0	0	0	0.5442	1	8397	8397		53.089	1.5612	1	261970			24532	2747	16530	16540	28084	28084					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5750427246094	3	403.575178	1207.70371	-1.8285	-0.00073793	1.0097	0.0004075	-0.81877	-0.00033043	403.5754909660959	80.353	1.0354	80.49	79.889	80.924	0.13702					64	31	3	0	0	0	0.86446	1	7661	7661		30.569	0	1	264210			24533	2747	16530	16540	28085	28085					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5747985839844	3	403.575178	1207.70371	-1.8261	-0.00073697	0.87736	0.00035408	-0.94874	-0.00038289	403.5754952513638	81.706	0.84529	81.851	81.446	82.291	0.14513					69	19	4	0	0	0	0.66675	1	7864	7864		46.457	7.2039	1	2366000			24534	2747	16530	16540	28086	28086					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.57476806640625	3	403.575178	1207.70371	-1.8238	-0.00073605	0.70537	0.00028467	-1.1185	-0.00045138	403.575388315242	82.768	3.2423	82.923	82.261	85.503	0.15474					165	75	3	0	0	0	0.47072	6	7999	7964;7974;7985;7999;8011;8071		58.246	12.69	1	1511600			24535	2747	16530	16540	28087;28088;28089;28090;28091;28092	28090					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.57489013671875	3	403.575178	1207.70371	0.56211	0.00022685	-1.4705	-0.00059345	-0.90837	-0.00036659	403.57452270455985	81.745	1.4637	81.891	80.868	82.331	0.14551					81	33	4	0	0	0	0.69342	4	7835	7825;7835;7872;7884		45.022	8.3381	1	2051300			24536	2747	16530	16540	28093;28094;28095;28096	28094					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.57427978515625	3	403.575178	1207.70371	0.57405	0.00023167	-1.6768	-0.00067673	-1.1028	-0.00044506	403.57443061209773	82.843	3.1803	82.99	82.289	85.469	0.14694					168	73	3	0	0	0	0.69342	5	7972	7961;7972;7984;7997;8008		45.022	8.7046	1	1495300			24537	2747	16530	16540	28097;28098;28099;28100;28101	28098					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.57464599609375	3	403.575178	1207.70371	-1.7086	-0.00068956	0.81853	0.00033034	-0.89009	-0.00035922	403.5754460433533	81.698	1.5245	81.812	80.874	82.399	0.11426					96	35	4	0	0	0	0.42897	2	7849	7776;7849		61.691	33.115	1	1977300			24538	2747	16530	16540	28102;28103	28103					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5747985839844	3	403.575178	1207.70371	-1.7546	-0.00070812	0.79854	0.00032227	-0.95608	-0.00038585	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.49268	2	8027	8027;8053		56.434	14.453	1	1090300			24539	2747	16530	16540	28104;28105	28104					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5747985839844	3	403.575178	1207.70371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.246	1	81.36	80.86	81.86	0.11426								0	0	0	0.45132	1	7730	7730		37.508	9.8643	1				24540	2747	16530	16540	28106	28106					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5746765136719	3	403.575178	1207.70371	1.058	0.00042698	-1.9376	-0.00078196	-0.87959	-0.00035498	403.5743201000087	79.412	0.85108	79.828	79.359	80.21	0.41621					61	19	4	0	0	0	0.47072	2	9105	9092;9105		58.246	15.382	1	1726100			24541	2747	16530	16540	28107;28108	28108					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8583984375	2	604.859129	1207.70371	0.35114	0.00021239	-1.3195	-0.00079808	-0.96832	-0.0005857	604.8582079417666	80.148	0.76048	80.564	80.168	80.928	0.41621					48	17	3	0	0	0	0.70061	1	9185	9185		47.96	5.0953	1	896500			24542	2747	16530	16540	28109	28109					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5747985839844	3	403.575178	1207.70371	0.97828	0.00039481	-1.9734	-0.0007964	-0.99509	-0.00040159	403.5743581781147	80.189	0.84587	80.605	80.082	80.928	0.41621					61	19	4	0	0	0	0.63899	1	9236	9236		47.96	4.3087	1	3876600			24543	2747	16530	16540	28110	28110					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.57476806640625	3	403.575178	1207.70371	0.92254	0.00037231	-2.2112	-0.0008924	-1.2887	-0.00052008	403.57437110018327	80.894	0.89915	81.316	80.891	81.79	0.4215					88	21	5	0	0	0	0.76096	4	9296	9296;9332;9355;9367		41.427	10.507	1	18400000			24544	2747	16530	16540	28111;28112;28113;28114	28111					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5746154785156	3	403.575178	1207.70371	0.82597	0.00033334	-2.2428	-0.00090514	-1.4168	-0.0005718	403.5742849619775	82.098	2.6206	82.524	81.753	84.373	0.42646					188	63	3	0	0	0	0.63899	12	9475	9429;9441;9464;9475;9487;9523;9535;9547;9559;9571;9595;9663		47.96	11.642	1	14382000			24545	2747	16530	16540	28115;28116;28117;28118;28119;28120;28121;28122;28123;28124;28125;28126	28118					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747375488281	3	403.575178	1207.70371	-0.21515	-8.6831E-05	-0.71244	-0.00028752	-0.9276	-0.00037436	403.57486213587435	79.28	1.3173	79.83	78.938	80.256	0.54945					66	30	3	0	0	0	0.78666	3	9119	9107;9119;9155		40.058	3.4217	1	2125200			24546	2747	16530	16540	28127;28128;28129	28128					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747375488281	3	403.575178	1207.70371	-0.18431	-7.4383E-05	-0.84021	-0.00033909	-1.0245	-0.00041347	403.57480385646164	80.099	0.84451	80.626	80.105	80.949	0.52676					63	19	4	0	0	0	0.76096	1	9251	9251		41.427	5.109	1	4093300			24547	2747	16530	16540	28130	28130					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.574951171875	3	403.575178	1207.70371	-0.15272	-6.1634E-05	-1.1844	-0.00047801	-1.3372	-0.00053965	403.57482141632175	80.779	1.0749	81.306	80.78	81.855	0.52676					103	25	6	0	0	0	0.63899	4	9370	9276;9310;9322;9370		47.96	2.436	1	21414000			24548	2747	16530	16540	28131;28132;28133;28134	28134					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8590087890625	2	604.859129	1207.70371	0.044967	2.7199E-05	-0.8945	-0.00054104	-0.84953	-0.00051385	604.8584867584212	80.792	1.0733	81.319	80.907	81.98	0.52676					69	21	4	0	0	0	0.81117	1	9364	9364		34.173	2.6427	1	4362400			24549	2747	16530	16540	28135	28135					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747985839844	3	403.575178	1207.70371	-0.098768	-3.986E-05	-1.4245	-0.00057487	-1.5232	-0.00061473	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.63899	9	9586	9407;9430;9526;9562;9574;9586;9598;9611;9647		47.96	11.642	1	16485000			24550	2747	16530	16540	28136;28137;28138;28139;28140;28141;28142;28143;28144	28141					0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	403.575178	1207.70371	-1.8296	-0.00073839	1.1069	0.00044672	-0.72273	-0.00029168	403.57559364228257	79.652	0.45311	79.782	79.628	80.081	0.13085	-0.06047	0.0025431	NaN	58.246	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78944			24551	2747	16530	16540							0.10816170071370834
KVEAEVKRLH	10	Unmodified	_KVEAEVKRLH_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	403.575178	1207.70371	-1.6399	-0.00066181	1.0112	0.00040811	-0.62865	-0.00025371	403.57536892557516	79.833	0.46273	79.931	79.661	80.124	0.098701	0.088542	0.0024272	NaN	58.246	25	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79523			24552	2747	16530	16540							0.10816170071370834
KVEKAFSES	9	Unmodified	_KVEKAFSES_					0	0	0		ENSG00000029639|ENST00000367166|TFB1M	ENSG00000029639|ENST00000367166|TFB1M	ENSG00000029639|ENST00000367166|TFB1M	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.7689819335938	2	512.769114	1023.52368	0.87728	0.00044984	-0.94824	-0.00048623	-0.070962	-3.6387E-05	512.7684517764806	22.796	1.0179	22.185	21.865	22.883	-0.6107					53	24	4	0	0	0	0.55097	1	982	982		49.442	3.4896	1	625090			24553	879	16531	16541	28145	28145					0.01285446343717922
KVEKALVKH	9	Unmodified	_KVEKALVKH_					0	0	0			REV__ENSG00000174705|ENST00000311601|SH3PXD2B	REV__ENSG00000174705|ENST00000311601|SH3PXD2B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3610229492188	2	526.334759	1050.65496	-0.073715	-3.8799E-05	-0.82501	-0.00043423	-0.89873	-0.00047303	526.3345195878009	33.65	0.25416	33.653	33.54	33.794	0.0026054					6	5	2	0	0	0	0.20789	1	1993	1993		56.721	21.103	1	10809	+		24554	22008	16532	16542	28146	28146					0.13166301502269562
KVEPYVLL	8	Unmodified	_KVEPYVLL_					0	0	0			REV__nc|ENSG00000095596|O43174-2|CYP26A1	REV__nc|ENSG00000095596|O43174-2|CYP26A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.7911376953125	2	480.791861	959.569169	0.21791	0.00010477	-4.2364	-0.0020368	-4.0185	-0.0019321	480.7896908578666	23.28	0.49775	22.705	22.467	22.965	-0.57415					18	11	2	0	0	0	0.89043	1	1027	1027		35.618	0.41757	1	135240			24555	17065	16533	16543	28147	28147					0.087767165967648
KVEQWYPGGR	10	Unmodified	_KVEQWYPGGR_					0	0	0			REV__ENSG00000137806|ENST00000260361|NDUFAF1	REV__ENSG00000137806|ENST00000260361|NDUFAF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7845458984375	3	407.212128	1218.61456	1.1674	0.00047537	0.36787	0.0001498	1.5353	0.00062517	407.21212060135906	34.865	0.62965	35.246	34.852	35.482	0.3812					32	15	3	0	0	0	0.37624	1	2596	2596		30.569	0	1	156660	+		24556	19407	16534	16544	28148	28148					0.013993351118415376
KVFAGIPTVAS	11	Unmodified	_KVFAGIPTVAS_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.31689453125	2	545.318774	1088.623	-0.68757	-0.00037494	-3.0506	-0.0016636	-3.7382	-0.0020385	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.70737	1	8593	8593		30.318	1.1682	1	3608000			24557	2287	16535	16545	28149	28149					0.08222889028479585
KVFAGIPTVAS	11	Unmodified	_KVFAGIPTVAS_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.316650390625	2	545.318774	1088.623	0.15103	8.2357E-05	-4.1145	-0.0022437	-3.9634	-0.0021613	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.67778	1	8891	8891		35.152	3.6222	1	5755000			24558	2287	16535	16545	28150	28150					0.08222889028479585
KVFDGIPPPY	10	Unmodified	_KVFDGIPPPY_					0	0	0		ENST00000472481.5_1_19:49990877-49994169:+|nuORF;ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3	ENST00000472481.5_1_19:49990877-49994169:+|nuORF	ENST00000472481.5_1_19:49990877-49994169:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.8053588867188	2	566.8055	1131.59645	-0.52899	-0.00029983	0.34758	0.00019701	-0.18141	-0.00010282	566.8055131198089	62.726	2.3736	63.113	62.36	64.733	0.38779					117	54	3	0	0	0	0.42393	4	6718	6718;6730;6779;6851		62.107	8.756	1	633890			24559	4569	16536	16546	28151;28152;28153;28154	28151					0.03591200137134365
KVFDGIPPPY	10	Unmodified	_KVFDGIPPPY_					0	0	0		ENST00000472481.5_1_19:49990877-49994169:+|nuORF;ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3	ENST00000472481.5_1_19:49990877-49994169:+|nuORF	ENST00000472481.5_1_19:49990877-49994169:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.8052368164062	2	566.8055	1131.59645	0.86267	0.00048897	-0.94989	-0.0005384	-0.087215	-4.9434E-05	566.804831631569	62.733	2.0024	63.288	62.559	64.561	0.55449					102	46	4	0	0	0	0.42393	5	6738	6738;6762;6773;6797;6820		62.107	24.296	1	716580			24560	4569	16536	16546	28155;28156;28157;28158;28159	28155					0.03591200137134365
KVFEAVIAWVN	11	Unmodified	_KVFEAVIAWVN_					0	0	0		nc|ENSG00000109466|O95198-3|KLHL2;ENSG00000109466|ENST00000226725|KLHL2;nc|ENSG00000109466|O95198-2|KLHL2;ENST00000509028.1_1_4:166184411-166231758:+|nuORF	nc|ENSG00000109466|O95198-3|KLHL2	nc|ENSG00000109466|O95198-3|KLHL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	637.3687133789062	2	638.358431	1274.70231	0.93737	0.00059838	-2.4431	-0.0015596	-1.5057	-0.0009612	638.3563519323485	105.43	0.19034	105.53	105.43	105.62	0.10766					6	4	2	0	0	0	0.17462	1	11246	11246		15.333	1.2471	1	48817			24561	2463	16537	16547	28160	28160					0.07594535982616435
KVFERAVQY	9	Unmodified	_KVFERAVQY_					0	0	0		ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.3129272460938	2	570.314023	1138.61349	0.44856	0.00025582	-0.48627	-0.00027732	-0.037702	-2.1502E-05	570.3136766172819	37.029	0.4966	37.311	37.093	37.59	0.28173					29	11	3	0	0	0	0.73802	1	2963	2963		37.812	1.3648	1	646040			24562	4987	16538	16548	28161	28161					0.04973120742943138
KVFERAVQY	9	Unmodified	_KVFERAVQY_					0	0	0		ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.3137817382812	2	570.314023	1138.61349	1.6172	0.00092232	-1.5491	-0.00088345	0.068143	3.8863E-05	570.3129382103181	36.901	0.6259	37.387	37.078	37.704	0.48581					30	14	3	0	0	0	0.076066	1	2944	2944		98.582	24.607	1	675150			24563	4987	16538	16548	28162	28162					0.04973120742943138
KVFGFASA	8	Unmodified	_KVFGFASA_					0	0	0		CON__ENSEMBL:ENSBTAP00000032840	CON__ENSEMBL:ENSBTAP00000032840	CON__ENSEMBL:ENSBTAP00000032840	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2375183105469	2	413.726521	825.438489	-1.8371	-0.00076006	0.88798	0.00036738	-0.94912	-0.00039268	413.7274556187537	75.236	0.11737	75.362	75.283	75.4	0.12545					4	2	2	0	0	0	0.4196	1	6993	6993		18.324	8.1396	1	9935.2		+	24564	571	16539	16549	28163	28163					0.01878745668557258
KVFGGTVHKK	10	Unmodified	_KVFGGTVHKK_					0	0	0		ENSG00000163655|ENST00000496455|GMPS;nc|ENSG00000163655|P49915-2|GMPS	ENSG00000163655|ENST00000496455|GMPS	ENSG00000163655|ENST00000496455|GMPS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.8324584960938	2	550.832383	1099.65021	-0.090391	-4.979E-05	0.045911	2.5289E-05	-0.044481	-2.4501E-05	550.8322797616815	17.582	0.52146	17.1	16.851	17.373	-0.48256					29	11	4	0	0	0	0.34329	2	273	265;273		68.846	14.13	1	579320			24565	5848	16540	16550	28164;28165	28165					0.10437417359503343
KVFGGTVHKK	10	Unmodified	_KVFGGTVHKK_					0	0	0		ENSG00000163655|ENST00000496455|GMPS;nc|ENSG00000163655|P49915-2|GMPS	ENSG00000163655|ENST00000496455|GMPS	ENSG00000163655|ENST00000496455|GMPS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8320922851562	2	550.832383	1099.65021	0.14182	7.8122E-05	-0.16962	-9.343E-05	-0.027792	-1.5309E-05	550.8321308312868	17.7	0.47925	17.079	16.875	17.355	-0.62141					34	12	4	0	0	0	0.12134	1	297	297		98.582	16.341	1	821950			24566	5848	16540	16550	28166	28166					0.10437417359503343
KVFGIISRYIN	11	Unmodified	_KVFGIISRYIN_					0	0	0			REV__ENSG00000176571|ENST00000518476|CNBD1	REV__ENSG00000176571|ENST00000518476|CNBD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2567443847656	3	437.259079	1308.75541	-1.0127	-0.0004428	-2.969	-0.0012982	-3.9816	-0.001741	437.25769841228777	99.435	2.9287	99.435	98.234	101.16	0					165	70	3	0	0	0	0.72892	1	10038	10038		26.75	0.68632	1	385900	+		24567	22136	16541	16551	28167	28167					0.1133791376530553
KVFGRVKF	8	Unmodified	_KVFGRVKF_					0	0	0		ENSG00000137628|ENST00000393743|DDX60	ENSG00000137628|ENST00000393743|DDX60	ENSG00000137628|ENST00000393743|DDX60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.80517578125	2	490.805637	979.596721	-1.0263	-0.0005037	1.252	0.00061447	0.22569	0.00011077	490.8060539311396	28.103	0.63312	28.006	27.707	28.34	-0.096945					28	14	3	0	0	0	0.89962	1	1678	1678		38.806	1.647	1	206040			24568	4218	16542	16552	28168	28168					0.10610664647651902
KVFKHRSYL	9	Unmodified	_KVFKHRSYL_					0	0	0		nc|ENSG00000204524|Q5CZA5-2|ZNF805;ENSG00000204524|ENST00000414468|ZNF805;ENSG00000083844|ENST00000263095|ZNF264	nc|ENSG00000204524|Q5CZA5-2|ZNF805	nc|ENSG00000204524|Q5CZA5-2|ZNF805	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3428344726562	2	589.345658	1176.67676	-0.6745	-0.00039751	-4.0641	-0.0023951	-4.7386	-0.0027927	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.76764	1	9927	9927		34.173	1.422	1	16185000			24569	8453	16543	16553	28169	28169					0.09549106250847217
KVFKNIKTVM	10	Unmodified	_KVFKNIKTVM_					0	0	0		ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-5|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6;nc|ENSG00000186976|Q5THR3-6|EFCAB6;ENST00000404038.5_1_22:44079617-44178198:-|nuORF	ENSG00000186976|ENST00000262726|EFCAB6	ENSG00000186976|ENST00000262726|EFCAB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2468566894531	3	403.245893	1206.71585	2.718	0.001096	-0.28346	-0.00011431	2.4345	0.00098171	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.85251	1	11547	11547		25.126	6.5949	1	15597000			24570	7832	16544	16554	28170	28170					0.12076070490161328
KVFKNIKTVM	10	Unmodified	_KVFKNIKTVM_					0	0	0		ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-5|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6;nc|ENSG00000186976|Q5THR3-6|EFCAB6;ENST00000404038.5_1_22:44079617-44178198:-|nuORF	ENSG00000186976|ENST00000262726|EFCAB6	ENSG00000186976|ENST00000262726|EFCAB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.24688720703125	3	403.245893	1206.71585	3.1806	0.0012826	-0.63485	-0.000256	2.5458	0.0010266	403.2455898338112	104.57	4.2773	104.61	103.55	107.83	0.039864					310	101	5	0	0	0	0.86272	1	11442	11442		17.833	0	1	15278000			24571	7832	16544	16554	28171	28171					0.12076070490161328
KVFKNPKFSI	10	Unmodified	_KVFKNPKFSI_					0	0	0		ENSG00000168928|ENST00000303037|CTRB2;ENSG00000168925|ENST00000361017|CTRB1	ENSG00000168928|ENST00000303037|CTRB2	ENSG00000168928|ENST00000303037|CTRB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2469787597656	3	403.24477	1206.71248	2.718	0.001096	2.5029	0.0010093	5.2209	0.0021053	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.8583	4	11511	11487;11511;11523;11535		30.569	7.9892	1	15597000			24572	6453	16545	16555	28172;28173;28174;28175	28173					0.11739143707836774
KVFKNPKFSI	10	Unmodified	_KVFKNPKFSI_					0	0	0		ENSG00000168928|ENST00000303037|CTRB2;ENSG00000168925|ENST00000361017|CTRB1	ENSG00000168928|ENST00000303037|CTRB2	ENSG00000168928|ENST00000303037|CTRB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.246826171875	3	403.24477	1206.71248	3.1806	0.0012826	2.1516	0.00086761	5.3322	0.0021502	403.2455898338112	104.57	4.2773	104.61	103.55	107.83	0.039864					310	101	5	0	0	0	0.86014	2	11418	11394;11418		29.551	8.7136	1	15278000			24573	6453	16545	16555	28176;28177	28177					0.11739143707836774
KVFKYDYPEN	10	Unmodified	_KVFKYDYPEN_					0	0	0			REV__nc|ENSG00000137944|Q6YP21-3|KYAT3	REV__nc|ENSG00000137944|Q6YP21-3|KYAT3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25189208984375	3	434.883677	1301.6292	-1.4143	-0.00061504	1.7236	0.00074956	0.30932	0.00013452	434.8830720364406	76.553	0.83083	76.642	76.088	76.918	0.089363					46	31	2	0	0	0	0.37624	1	7146	7146		19.263	0	1	84621	+		24574	19425	16546	16556	28178	28178					-0.009546375306626942
KVFLLLLVD	9	Unmodified	_KVFLLLLVD_					0	0	0			REV__ENSG00000176597|ENST00000326505|B3GNT5	REV__ENSG00000176597|ENST00000326505|B3GNT5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.3854370117188	2	530.344261	1058.67397	0.1657	8.7877E-05	-2.0795	-0.0011028	-1.9138	-0.001015	530.8447913949738	26.864	0.30353	26.973	26.787	27.091	0.10901					13	13	2	0	0	0	0.20789	1	1039	1039		24.203	3.2558	1	29009	+		24575	22138	16547	16557	28179	28179					0.14697838073334424
KVFRPRMLSK	10	Unmodified	_KVFRPRMLSK_					0	0	0		ENST00000542475.2_2_17:6555824-6555875:+|nuORF	ENST00000542475.2_2_17:6555824-6555875:+|nuORF	ENST00000542475.2_2_17:6555824-6555875:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2571105957031	3	421.256904	1260.74888	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.045	1	22.626	22.126	23.126	-0.41879								0	0	0	0.45132	1	986	986		30.569	10.254	1				24576	13533	16548	16558	28180	28180					0.12893697332901866
KVFSPRTHS	9	Unmodified	_KVFSPRTHS_					0	0	0		ENST00000345016.9_1_19:2101205-2101811:-|nuORF	ENST00000345016.9_1_19:2101205-2101811:-|nuORF	ENST00000345016.9_1_19:2101205-2101811:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.3058471679688	2	529.790715	1057.56688	1.2301	0.00065169	-3.4588	-0.0018325	-2.2287	-0.0011808	529.7887849938536	34.163	0.49352	34.468	34.241	34.735	0.30494					17	11	2	0	0	0	0.20789	1	2511	2511		36.447	11.928	1	177480			24577	10299	16549	16559	28181	28181					0.04039680911660071
KVFVLGHN	8	Unmodified	_KVFVLGHN_					0	0	0			REV__ENSG00000122550|ENST00000339077|KLHL7	REV__ENSG00000122550|ENST00000339077|KLHL7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2640075683594	2	457.266345	912.518136	-1.2409	-0.00056743	-3.1044	-0.0014196	-4.3454	-0.001987	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.87479	2	7691	7691;7760		31.955	2.8053	1	2957200	+		24578	18504	16550	16560	28182;28183	28182					0.05837812342565485
KVFVLGHN	8	Unmodified	_KVFVLGHN_					0	0	0			REV__ENSG00000122550|ENST00000339077|KLHL7	REV__ENSG00000122550|ENST00000339077|KLHL7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26385498046875	2	457.266345	912.518136	-1.4614	-0.00066827	-2.8868	-0.00132	-4.3482	-0.0019883	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.87922	1	7518	7518		31.955	1.4512	1	1032000	+		24579	18504	16550	16560	28184	28184					0.05837812342565485
KVFVQTPTINY	11	Unmodified	_KVFVQTPTINY_					0	0	0		ENST00000565460.1_1_16:68289553-68293557:+|nuORF;nc|ENSG00000103066|Q8NCC3-2|PLA2G15;ENSG00000103066|ENST00000219345|PLA2G15	ENST00000565460.1_1_16:68289553-68293557:+|nuORF	ENST00000565460.1_1_16:68289553-68293557:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77105712890625	3	437.243206	1308.70779	-0.070636	-3.0885E-05	-2.2684	-0.00099184	-2.339	-0.0010227	437.57760759400134	38.932	0.13596	38.879	38.8	38.936	-0.052731					5	3	2	0	0	0	0.1745	1	2343	2343		17.833	3.7471	1	23525			24580	2052	16551	16561	28185	28185					0.06578214774435764
KVGAEEYVE	9	Unmodified	_KVGAEEYVE_					0	0	0			REV__ENSG00000173598|ENST00000415493|NUDT4	REV__ENSG00000173598|ENST00000415493|NUDT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.25439453125	2	512.253297	1022.49204	-0.38169	-0.00019552	1.3498	0.00069142	0.96807	0.0004959	512.2538769688313	54.312	1.3388	54.263	53.816	55.154	-0.049274					65	39	2	0	0	0	0.74721	1	4487	4487		37.159	0	1	691410	+		24581	21936	16552	16562	28186	28186					-0.018305464102354563
KVGCSRQPR	9	Unmodified	_KVGCSRQPR_					0	0	0			REV__ENST00000477225.1_1_3:49161032-49161185:-|nuORF	REV__ENST00000477225.1_1_3:49161032-49161185:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.803466796875	2	515.782367	1029.55018	0.84489	0.00043578	1.2929	0.00066687	2.1378	0.0011026	515.7815287282972	23.103	0.10853	22.529	22.467	22.575	-0.57415					4	2	2	0	0	0	0.20789	1	1000	1000		45.972	0	1	18580	+		24582	27352	16553	16563	28187	28187					0.036588567540547956
KVGCYDAN	8	Unmodified	_KVGCYDAN_					0	0	0		nc|ENSG00000133401|O15018-2|PDZD2;ENSG00000133401|ENST00000438447|PDZD2;ENST00000502489.5_1_5:31983264-32077762:+|nuORF	nc|ENSG00000133401|O15018-2|PDZD2	nc|ENSG00000133401|O15018-2|PDZD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.1979064941406	2	435.194728	868.374903	2.3747	0.0010334	2.3102	0.0010054	4.6849	0.0020388	435.195585607861	100.17	1.1497	100.52	100.11	101.26	0.34591					48	28	3	0	0	0	0.89962	1	12183	12183		38.806	1.647	1	600290			24583	3876	16554	16564	28188	28188					-0.06454982830837253
KVGENVLPPK	10	Unmodified	_KVGENVLPPK_					0	0	0		nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;ENSG00000117523|ENST00000647382|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8226928710938	2	540.824224	1079.63389	-0.12124	-6.5567E-05	0.11497	6.2178E-05	-0.0062666	-3.3891E-06	540.8240202358065	30.852	1.981	30.855	30.404	32.385	0.0037212					83	45	3	0	0	0	0.44803	1	2099	2099		60.118	5.3419	1	218080			24584	2984	16555	16565	28189	28189					0.09726291402739662
KVGFRPIN	8	Unmodified	_KVGFRPIN_					0	0	0			REV__ENST00000586275.1_1_19:10563984-10570204:+|nuORF	REV__ENST00000586275.1_1_19:10563984-10570204:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7774658203125	2	465.779619	929.544686	-1.5315	-0.00071332	-2.8632	-0.0013336	-4.3947	-0.0020469	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.87479	1	7895	7895		30.504	0.18592	1	991370	+		24585	15678	16556	16566	28190	28190					0.07709501233887295
KVGFRQIF	8	Unmodified	_KVGFRQIF_					0	0	0			REV__nc|ENSG00000214946|Q86UD7|TBC1D26	REV__nc|ENSG00000214946|Q86UD7|TBC1D26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7950439453125	2	497.795269	993.575986	-1.291	-0.00064263	2.2189	0.0011046	0.92797	0.00046194	497.79630502708676	46.597	0.8435	47.069	46.457	47.3	0.4714					42	20	3	0	0	0	0.884	1	4379	4379		33.516	6.7195	1	1411700	+		24586	30202	16557	16567	28191	28191					0.07894074267983342
KVGGADVLRV	10	Unmodified	_KVGGADVLRV_					0	0	0			REV__ENSG00000162337|ENST00000294304|LRP5	REV__ENSG00000162337|ENST00000294304|LRP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.30859375	2	507.308741	1012.60293	1.7512	0.00088841	-1.6339	-0.00082888	0.11735	5.9535E-05	507.3077698105232	28.448	0.69688	28.275	27.934	28.631	-0.17336					37	17	3	0	0	0	0.85981	1	1747	1747		35.152	2.3396	1	310230	+		24587	20804	16558	16568	28192	28192					0.0971313808852301
KVGGLDFSPV	10	Unmodified	_KVGGLDFSPV_					0	0	0		ENST00000536066.1_1_12:2967806-2973707:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;chr12:2864755-2866393|51|11.75|0.34|5.12|-|ENST00000627656|FOXM1,FOXM1;ENSG00000111206|ENST00000359843|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1;chr12:2861412-2864320|57|14.95|0.58|4.69|-|ENST00000342628|FOXM1,FOXM1	ENST00000536066.1_1_12:2967806-2973707:-|nuORF	ENST00000536066.1_1_12:2967806-2973707:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.7846374511719	2	509.782025	1017.5495	5.0413	0.00257	1.3305	0.00067827	6.3718	0.0032483	509.78224354563946	106.8	0.60811	106.95	106.64	107.25	0.14929					48	21	3	0	0	0	0.70553	1	13049	13049		44.377	5.571	1	378320			24588	128	16559	16569	28193	28193					0.04142340586008686
KVGGTKPAG	9	Unmodified	_KVGGTKPAG_					0	0	0		ENST00000521618.1_1_8:80950353-80954926:-|nuORF;ENST00000523395.5_1_8:80950353-80963533:-|nuORF;ENST00000520877.5_1_8:80950353-80963533:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF;nc|ENSG00000076554|P55327-2|TPD52;ENSG00000076554|ENST00000518937|TPD52;nc|ENSG00000076554|P55327|TPD52;nc|ENSG00000076554|P55327-7|TPD52;nc|ENSG00000076554|P55327-5|TPD52;nc|ENSG00000076554|P55327-6|TPD52;nc|ENSG00000076554|P55327-3|TPD52	ENST00000521618.1_1_8:80950353-80954926:-|nuORF	ENST00000521618.1_1_8:80950353-80954926:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.7417907714844	2	407.742702	813.470852	1.2989	0.00052962	-3.1403	-0.0012805	-1.8414	-0.00075083	407.74125603889695	25.528	1.2143	25.271	24.909	26.123	-0.2572					49	27	3	0	0	0	0.71772	1	1320	1320		39.253	1.4413	1	568780			24589	1359	16560	16570	28194	28194					0.05665533071567097
KVGHTAHIKV	10	Unmodified	_KVGHTAHIKV_					0	0	0		ENSG00000179057|ENST00000513874|IGSF22;nc|ENSG00000179057|Q8N9C0|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3062133789062	2	545.330008	1088.64546	1.5506	0.0008456	3.606	0.0019665	5.1566	0.0028121	545.3301316864171	24.444	0.17714	23.93	23.835	24.012	-0.51365					5	3	2	0	0	0	0.37624	1	1189	1189		19.104	7.5925	1	28328			24590	7241	16561	16571	28195	28195					0.10468533216749165
KVGISVLLRNP	11	Unmodified	_KVGISVLLRNP_					0	0	0		ENST00000543420.5_1_12:10464095-10467389:+|nuORF;ENST00000539374.1_1_12:10464095-10467389:+|nuORF	ENST00000543420.5_1_12:10464095-10467389:+|nuORF	ENST00000543420.5_1_12:10464095-10467389:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3818969726562	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.7434	1	2661	2661		23.523	5.2606	1	352020			24591	13476	16562	16572	28196	28196					0.15525931110846614
KVGISVLLRNP	11	Unmodified	_KVGISVLLRNP_					0	0	0		ENST00000543420.5_1_12:10464095-10467389:+|nuORF;ENST00000539374.1_1_12:10464095-10467389:+|nuORF	ENST00000543420.5_1_12:10464095-10467389:+|nuORF	ENST00000543420.5_1_12:10464095-10467389:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.3799438476562	2	598.379697	1194.74484	0.38806	0.00023221	2.9197	0.0017471	3.3077	0.0019793	598.3812845043491	40.552	1.126	40.504	40.15	41.276	-0.04789					105	43	3	0	0	0	0.75544	1	2603	2603		20.837	0	1	664060			24592	13476	16562	16572	28197	28197					0.15525931110846614
KVGKAVLH	8	Unmodified	_KVGKAVLH_					0	0	0			REV__nc|ENSG00000137601|Q96PY6-4|NEK1	REV__nc|ENSG00000137601|Q96PY6-4|NEK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2950134277344	2	426.276712	850.538872	-0.74149	-0.00031608	-1.4066	-0.0005996	-2.1481	-0.00091568	426.2750667948355	73.099	0.3282	73.487	73.209	73.537	0.38779					12	7	2	0	0	0	0.4196	1	8171	8171		28.254	7.7724	1	68517	+		24593	19394	16563	16573	28198	28198					0.10762402722230036
KVGKHESL	8	Unmodified	_KVGKHESL_					0	0	0			REV__ENSG00000153208|ENST00000295408|MERTK	REV__ENSG00000153208|ENST00000295408|MERTK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.26019287109375	2	449.261259	896.507966	-0.14415	-6.4761E-05	-1.5249	-0.00068508	-1.6691	-0.00074984	449.2602647211942	72.863	0.66953	72.903	72.644	73.313	0.040031					41	22	3	0	0	0	0.87064	1	6961	6961		29.15	0	1	185370	+		24594	20338	16564	16574	28199	28199					0.055572046173210765
KVGKLGDP	8	Unmodified	_KVGKLGDP_					0	0	0		ENST00000336557.9_1_14:24777962-24779637:-|nuORF;ENST00000258807.5_1_14:24777962-24780611:-|nuORF	ENST00000336557.9_1_14:24777962-24779637:-|nuORF	ENST00000336557.9_1_14:24777962-24779637:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852478027344	2	407.245078	812.475603	-0.10032	-4.0855E-05	0.42043	0.00017122	0.32011	0.00013036	407.24489211115167	34.143	0.21569	34.138	34.044	34.259	-0.0047417					5	4	2	0	0	0	0.4196	1	2030	2030		34.173	6.2903	1	10652			24595	9375	16565	16575	28200	28200					0.061864172143259566
KVGKLSESTGK	11	Unmodified	_KVGKLSESTGK_					0	0	0			REV__ENSG00000095951|ENST00000379388|HIVEP1	REV__ENSG00000095951|ENST00000379388|HIVEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3306884765625	2	567.32987	1132.64519	1.497	0.00084932	-1.6772	-0.00095153	-0.18017	-0.00010222	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.732	1	9517	9517		26.063	0.48933	1	15259000	+		24596	17071	16566	16576	28201	28201					0.08417068706262398
KVGLAVII	8	Unmodified	_KVGLAVII_					0	0	0			REV__ENSG00000013293|ENST00000231706|SLC7A14	REV__ENSG00000013293|ENST00000231706|SLC7A14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.785400390625	2	406.783839	811.553125	1.9606	0.00079753	1.7235	0.0007011	3.6841	0.0014986	406.7843974234306	33.155	0.95889	33.153	32.87	33.829	-0.0016365					72	22	4	0	0	0	0.81548	1	2004	2004		20.482	0	1	517740	+		24597	16193	16567	16577	28202	28202					0.13981055150509292
KVGLAVII	8	Unmodified	_KVGLAVII_					0	0	0			REV__ENSG00000013293|ENST00000231706|SLC7A14	REV__ENSG00000013293|ENST00000231706|SLC7A14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7850646972656	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.86288	1	1234	1234		26.796	0	1	1286900	+		24598	16193	16567	16577	28203	28203					0.13981055150509292
KVGLAVII	8	Unmodified	_KVGLAVII_					0	0	0			REV__ENSG00000013293|ENST00000231706|SLC7A14	REV__ENSG00000013293|ENST00000231706|SLC7A14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78497314453125	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.81548	2	1532	1532;1538		21.702	0	1	1817700	+		24599	16193	16567	16577	28204;28205	28204					0.13981055150509292
KVGLPELI	8	Unmodified	_KVGLPELI_					0	0	0		ENST00000392028.8_2_19:40947168-40947366:-|nuORF	ENST00000392028.8_2_19:40947168-40947366:-|nuORF	ENST00000392028.8_2_19:40947168-40947366:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7784423828125	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.84341	1	3651	3651		24.203	2.5004	1	1294000			24600	11008	16568	16578	28206	28206					0.10388447425293634
KVGLPELI	8	Unmodified	_KVGLPELI_					0	0	0		ENST00000392028.8_2_19:40947168-40947366:-|nuORF	ENST00000392028.8_2_19:40947168-40947366:-|nuORF	ENST00000392028.8_2_19:40947168-40947366:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7791748046875	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.80706	1	3671	3671		19.36	0	1	2017500			24601	11008	16568	16578	28207	28207					0.10388447425293634
KVGLPELI	8	Unmodified	_KVGLPELI_					0	0	0		ENST00000392028.8_2_19:40947168-40947366:-|nuORF	ENST00000392028.8_2_19:40947168-40947366:-|nuORF	ENST00000392028.8_2_19:40947168-40947366:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.80706	1	2314	2314		19.36	1.0356	1	2486400			24602	11008	16568	16578	28208	28208					0.10388447425293634
KVGLRTVINVP	11	Unmodified	_KVGLRTVINVP_					0	0	0		L1MC1_dup5266|chr6:80042944-80044043:-|1.7108556766587488|0.133159998821808|3.68|63.0|12|1|sense	L1MC1_dup5266|chr6:80042944-80044043:-|1.7108556766587488|0.133159998821808|3.68|63.0|12|1|sense	L1MC1_dup5266|chr6:80042944-80044043:-|1.7108556766587488|0.133159998821808|3.68|63.0|12|1|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.8819580078125	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.75164	1	2653	2653		21.686	2.5822	1	352020			24603	14589	16569	16579	28209	28209					0.15525931110823876
KVGLRVVV	8	Unmodified	_KVGLRVVV_					0	0	0		ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3002624511719	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.80706	2	6893	6629;6893		19.36	0	1	1072400			24604	10456	16570	16580	28210;28211	28211					0.14627262273370434
KVGLRVVV	8	Unmodified	_KVGLRVVV_					0	0	0		ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3003845214844	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.80706	3	6937	6893;6920;6937		19.36	5.5846	1	1680500			24605	10456	16570	16580	28212;28213;28214	28214					0.14627262273370434
KVGLRVVV	8	Unmodified	_KVGLRVVV_					0	0	0		ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3009033203125	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.82419	1	7193	7193		13.775	1.5685	1	1702600			24606	10456	16570	16580	28215	28215					0.14627262273370434
KVGLRVVV	8	Unmodified	_KVGLRVVV_					0	0	0		ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3001403808594	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.81724	4	6695	6458;6644;6677;6695		14.664	5.1935	1	2081500			24607	10456	16570	16580	28216;28217;28218;28219	28219					0.14627262273370434
KVGLRVVV	8	Unmodified	_KVGLRVVV_					0	0	0		ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.29998779296875	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.82419	2	6747	6717;6747		13.775	4.953	1	1819800			24608	10456	16570	16580	28220;28221	28221					0.14627262273370434
KVGLRVVV	8	Unmodified	_KVGLRVVV_					0	0	0		ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	ENST00000360822.7_1_9:123151210-123151465:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2998962402344	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.80706	1	6784	6784		19.36	5.5846	1	1852500			24609	10456	16570	16580	28222	28222					0.14627262273370434
KVGNIEQGSY	10	Unmodified	_KVGNIEQGSY_					0	0	0		ENST00000409926.2_1_22:25082945-25083062:+|nuORF	ENST00000409926.2_1_22:25082945-25083062:+|nuORF	ENST00000409926.2_1_22:25082945-25083062:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.2152099609375	2	547.77747	1093.54039	-0.50273	-0.00027538	-1.7002	-0.00093134	-2.2029	-0.0012067	547.7762926420334	54.544	0.3776	55.129	54.959	55.337	0.58474					10	8	2	0	0	0	0.37624	1	5593	5593		51.193	7.5419	1	146770			24610	11320	16571	16581	28223	28223					-0.0026405277030789875
KVGPARKG	8	Unmodified	_KVGPARKG_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2606506347656	2	406.758687	811.502821	-0.12417	-5.0508E-05	-0.69589	-0.00028306	-0.82006	-0.00033357	406.7586615976789	58.174	0.3891	58.144	57.979	58.368	-0.029865					13	9	2	0	0	0	0.4196	1	5403	5403		6.7355	0	1	39567			24611	1550	16572	16582	28224	28224					0.08952945545377133
KVGRDVVQK	9	Unmodified	_KVGRDVVQK_					0	0	0		nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11	nc|ENSG00000133392|P35749-4|MYH11	nc|ENSG00000133392|P35749-4|MYH11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.8140258789062	2	514.81419	1027.61383	0.81769	0.00042096	-1.1947	-0.00061504	-0.377	-0.00019409	514.813579480516	16.607	0.79747	16.12	15.959	16.757	-0.48718					38	17	4	0	0	0	0.58668	1	172	172		47.657	0	1	2794600			24612	14928	16573	16583	28225	28225					0.1011254046279646
KVGRTKIMSAS	11	Unmodified	_KVGRTKIMSAS_					0	0	0		ENST00000452532.1_1_X:55934586-55934826:+|nuORF	ENST00000452532.1_1_X:55934586-55934826:+|nuORF	ENST00000452532.1_1_X:55934586-55934826:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.34326171875	2	589.339715	1176.66488	2.472	0.0014569	2.8805	0.0016976	5.3526	0.0031545	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.62614	2	10193	10024;10193		41.427	9.8968	1	16740000			24613	11921	16574	16584	28226;28227	28227					0.08361121445341269
KVGRTKIMSAS	11	Unmodified	_KVGRTKIMSAS_					0	0	0		ENST00000452532.1_1_X:55934586-55934826:+|nuORF	ENST00000452532.1_1_X:55934586-55934826:+|nuORF	ENST00000452532.1_1_X:55934586-55934826:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3425903320312	2	589.339715	1176.66488	0.81285	0.00047905	4.2888	0.0025276	5.1016	0.0030066	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.72739	1	9380	9380		27.047	3.5246	1	6450100			24614	11921	16574	16584	28228	28228					0.08361121445341269
KVGSSFPAPR	10	Unmodified	_KVGSSFPAPR_					0	0	0		nc|ENSG00000185436|Q8IU57-3|IFNLR1	nc|ENSG00000185436|Q8IU57-3|IFNLR1	nc|ENSG00000185436|Q8IU57-3|IFNLR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2932739257812	2	523.293091	1044.57163	0.39646	0.00020747	0.15502	8.1118E-05	0.55148	0.00028859	523.2930181099207	17.247	0.36919	16.636	16.475	16.844	-0.6107					13	7	3	0	0	0	0.60985	1	235	235		49.536	1.8787	1	119630			24615	15150	16575	16585	28229	28229					0.05112565054423612
KVGSSFPAPR	10	Unmodified	_KVGSSFPAPR_					0	0	0		nc|ENSG00000185436|Q8IU57-3|IFNLR1	nc|ENSG00000185436|Q8IU57-3|IFNLR1	nc|ENSG00000185436|Q8IU57-3|IFNLR1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	523.293091	1044.57163	1.0442	0.00054644	0.041695	2.1819E-05	1.0859	0.00056826	523.2923589240022	17.186	0.22583	16.703	16.579	16.804	-0.48256	0.033646	-6.7484E-05	NaN	49.536	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	117510			24616	15150	16575	16585							0.05112565054423612
KVGSSRVH	8	Unmodified	_KVGSSRVH_					0	0	0		ENST00000485667.1_1_3:184073137-184079267:-|nuORF	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25201416015625	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.90465	1	8210	8210		40.573	0	1	2823900			24617	12563	16576	16586	28230	28230					0.04839453677379879
KVGVGPRVK	9	Unmodified	_KVGVGPRVK_					0	0	0			REV__ENST00000466110.5_1_2:74598513-74598831:-|nuORF	REV__ENST00000466110.5_1_2:74598513-74598831:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7709655761719	2	470.308544	938.602535	-0.49658	-0.00023355	0.48622	0.00022867	-0.010361	-4.8729E-06	470.30904403170365	64.137	1.2315	64.523	63.962	65.193	0.3868					42	28	2	0	0	0	0.20789	1	7005	7005		23.042	0	1	57364	+		24618	27120	16577	16587	28231	28231					0.13077763159310507
KVGVQPAVC	9	Unmodified	_KVGVQPAVC_					0	0	0		nc|ENSG00000184368|Q96T17-5|MAP7D2;nc|ENSG00000184368|Q96T17-4|MAP7D2;nc|ENSG00000184368|Q96T17|MAP7D2;ENSG00000184368|ENST00000379643|MAP7D2	nc|ENSG00000184368|Q96T17-5|MAP7D2	nc|ENSG00000184368|Q96T17-5|MAP7D2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7543029785156	2	450.752213	899.489873	-0.14159	-6.3823E-05	4.4024	0.0019844	4.2608	0.0019205	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.7932	1	7770	7770		24.203	1.1603	1	109620			24619	7604	16578	16588	28232	28232					0.0361074637096408
KVGVRTRG	8	Unmodified	_KVGVRTRG_					0	0	0		ENST00000577104.1_1_17:52555182-52555515:+|nuORF;ENSG00000135070|ENST00000375991|ISCA1;nc|ENSG00000135070|Q9BUE6-2|ISCA1	ENST00000577104.1_1_17:52555182-52555515:+|nuORF	ENST00000577104.1_1_17:52555182-52555515:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7737731933594	2	436.774868	871.535184	-0.34985	-0.00015281	-2.9642	-0.0012947	-3.314	-0.0014475	436.77383375696394	27.418	1.1225	27.379	27.041	28.164	-0.038523					45	25	2	0	0	0	0.87479	1	1302	1302		30.504	3.7075	1	85606			24620	14063	16579	16589	28233	28233					0.09427732948381617
KVGVVAPR	8	Unmodified	_KVGVVAPR_					0	0	0			REV__nc|ENSG00000007402|Q9NY47-4|CACNA2D2	REV__nc|ENSG00000007402|Q9NY47-4|CACNA2D2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2662658691406	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.8347	1	2456	2456		23.042	1.3402	1	268720	+		24621	15809	16580	16590	28234	28234					0.10394116205179671
KVHERPIG	8	Unmodified	_KVHERPIG_					0	0	0			REV__ENSG00000196189|ENST00000368285|SEMA4A	REV__ENSG00000196189|ENST00000368285|SEMA4A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.2745666503906	2	468.274701	934.534849	-2.0881	-0.00097778	1.8822	0.00088138	-0.20587	-9.6403E-05	468.2753445658491	17.062	0.36622	17.062	16.861	17.228	0					37	16	3	0	0	0	0.87064	1	173	173		29.15	2.3535	1	121570	+		24622	23102	16581	16591	28235	28235					0.06496313228512918
KVHGSLARAGK	11	Unmodified	_KVHGSLARAGK_					0	0	0		ENSG00000149806|ENST00000529639|FAU;ENST00000531357.1_1_11:64888296-64888581:-|nuORF	ENSG00000149806|ENST00000529639|FAU	ENSG00000149806|ENST00000529639|FAU	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.8383178710938	2	562.338364	1122.66217	0.9674	0.00054401	-0.74652	-0.0004198	0.22088	0.00012421	562.3377800736213	16.862	0.5685	16.374	16.052	16.62	-0.48718					22	12	3	0	0	0	0.34641	1	187	187		63.534	17.582	1	76447			24623	5051	16582	16592	28236	28236					0.10575034102680547
KVHLLRAEEAN	11	Unmodified	_KVHLLRAEEAN_					0	0	0			REV__ENSG00000164609|ENST00000297151|SLU7	REV__ENSG00000164609|ENST00000297151|SLU7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3589477539062	2	640.359493	1278.70443	-0.024279	-1.5547E-05	-0.77441	-0.0004959	-0.79869	-0.00051145	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.51007	1	10130	10130		51.193	5.2204	1	448130	+		24624	21095	16583	16593	28237	28237					0.07622964720439995
KVHNRKHTG	9	Unmodified	_KVHNRKHTG_					0	0	0		ENSG00000204859|ENST00000377674|ZBTB48	ENSG00000204859|ENST00000377674|ZBTB48	ENSG00000204859|ENST00000377674|ZBTB48	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.806640625	2	538.807231	1075.59991	2.2674	0.0012217	-3.269	-0.0017614	-1.0016	-0.00053969	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.7932	1	9475	9475		24.203	2.2429	1	835060			24625	8493	16584	16594	28238	28238					0.06513307754357811
KVHRKVVLH	9	Unmodified	_KVHRKVVLH_					0	0	0		ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.355712890625	2	558.361642	1114.70873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.626	1	22.714	22.214	23.214	0.088013								0	0	0	0.32159	1	692	692		23.042	0.46283	1				24626	7970	16585	16595	28239	28239					0.15596518724646558
KVHVIQTR	8	Unmodified	_KVHVIQTR_					0	0	0			REV__nc|ENSG00000091490|Q68CR1-2|SEL1L3	REV__nc|ENSG00000091490|Q68CR1-2|SEL1L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.80499267578125	2	490.803626	979.592698	0.8824	0.00043309	3.4199	0.0016785	4.3023	0.0021116	490.8050515680166	28.128	0.66595	27.873	27.587	28.253	-0.25465					35	15	4	0	0	0	0.5397	1	1690	1690		73.975	18.471	1	298140	+		24627	17015	16586	16596	28240	28240					0.10208575153944821
KVHVLLMLT	9	Unmodified	_KVHVLLMLT_					0	0	0		ENST00000436656.5_1_1:173834575-173834626:-|nuORF	ENST00000436656.5_1_1:173834575-173834626:-|nuORF	ENST00000436656.5_1_1:173834575-173834626:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3268432617188	2	527.328088	1052.64162	-0.48971	-0.00025824	-1.1786	-0.00062151	-1.6683	-0.00087975	527.3262778423052	58.815	0.38758	58.807	58.678	59.065	-0.0074387					21	17	2	0	0	0	0.20789	1	5020	5020		16.473	2.6978	1	45814			24628	11725	16587	16597	28241	28241					0.11740727398682793
KVHVLLMLT	9	Unmodified	_KVHVLLMLT_					0	0	0		ENST00000436656.5_1_1:173834575-173834626:-|nuORF	ENST00000436656.5_1_1:173834575-173834626:-|nuORF	ENST00000436656.5_1_1:173834575-173834626:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	527.328088	1052.64162	0.44787	0.00023617	-1.4265	-0.00075222	-0.97861	-0.00051605	527.8293022422619	58.491	0.28268	58.601	58.433	58.716	0.11027	-0.10318	-0.00012594	NaN	16.473	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46952			24629	11725	16587	16597							0.11740727398682793
KVIADAREKP	10	Unmodified	_KVIADAREKP_					0	0	0			REV__ENSG00000151005|ENST00000280605|TKTL2	REV__ENSG00000151005|ENST00000280605|TKTL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.8325805664062	2	563.83258	1125.65061	1.1189	0.00063088	-1.0374	-0.00058491	0.081525	4.5967E-05	563.8318646992443	22.052	0.8838	21.609	21.235	22.119	-0.44324					49	19	3	0	0	0	0.47091	1	834	834		58.23	4.8785	1	572300	+		24630	20230	16588	16598	28242	28242					0.0928079228867773
KVIELLERESK	11	Unmodified	_KVIELLERESK_					0	0	0			REV__nc|ENSG00000168906|P31153-2|MAT2A	REV__nc|ENSG00000168906|P31153-2|MAT2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2542419433594	3	448.601282	1342.78202	-1.3642	-0.00061199	-2.41	-0.0010811	-3.7742	-0.0016931	448.6002974296116	43.751	0.51878	44.201	43.963	44.482	0.45025					20	12	2	0	0	0	0.17281	1	4013	4013		18.966	0.63466	1	356470	+		24631	21531	16589	16599	28243	28243					0.12433557865938383
KVIELLERESK	11	Unmodified	_KVIELLERESK_					0	0	0			REV__nc|ENSG00000168906|P31153-2|MAT2A	REV__nc|ENSG00000168906|P31153-2|MAT2A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	448.601282	1342.78202	-1.6041	-0.00071961	-2.0791	-0.0009327	-3.6832	-0.0016523	448.6003594107068	43.48	0.51839	44.254	43.984	44.502	0.7738	0.026373	0.00029569	NaN	18.966	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	416490	+		24632	21531	16589	16599							0.12433557865938383
KVIIGLPE	8	Unmodified	_KVIIGLPE_					0	0	0			REV__ENSG00000112249|ENST00000369162|ASCC3	REV__ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7802734375	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.884	1	2440	2440		33.516	6.7195	1	7451800	+		24633	17934	16590	16600	28244	28244					0.10388447425282266
KVIILHPPR	9	Unmodified	_KVIILHPPR_					0	0	0		ENST00000369798.6_1_6:80750412-80752022:+|nuORF	ENST00000369798.6_1_6:80750412-80752022:+|nuORF	ENST00000369798.6_1_6:80750412-80752022:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1653442382812	2	536.853119	1071.69168	-0.098002	-5.2613E-05	-2.6803	-0.0014389	-2.7783	-0.0014915	537.3515848591497	18.103	0.99713	18.147	17.971	18.968	0.044048					83	47	3	0	0	0	0.20789	1	377	377		6.7355	0	1	191080			24634	10627	16591	16601	28245	28245					0.15870598118840462
KVIILHPPR	9	Unmodified	_KVIILHPPR_					0	0	0		ENST00000369798.6_1_6:80750412-80752022:+|nuORF	ENST00000369798.6_1_6:80750412-80752022:+|nuORF	ENST00000369798.6_1_6:80750412-80752022:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	536.853119	1071.69168	-1.7264	-0.00092685	-0.60712	-0.00032594	-2.3336	-0.0012528	536.8531626158777	17.799	0.057177	17.799	17.772	17.83	0	-0.24228	0.0021492	NaN	10.866	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17480			24635	10627	16591	16601							0.15870598118840462
KVIILHPPR	9	Unmodified	_KVIILHPPR_					0	0	0		ENST00000369798.6_1_6:80750412-80752022:+|nuORF	ENST00000369798.6_1_6:80750412-80752022:+|nuORF	ENST00000369798.6_1_6:80750412-80752022:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	536.853119	1071.69168	-0.2482	-0.00013325	-4.6895	-0.0025176	-4.9377	-0.0026508	537.351749665185	18.808	0.21941	18.179	18.06	18.28	-0.6296	0.13701	-0.0022341	NaN	10.866	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77513			24636	10627	16591	16601							0.15870598118840462
KVIKGAEILEV	11	Unmodified	_KVIKGAEILEV_					0	0	0		nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-2|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;ENSG00000163636|ENST00000295901|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6;ENST00000497315.5_1_3:64004227-64005057:-|nuORF	nc|ENSG00000163636|Q15008-3|PSMD6	nc|ENSG00000163636|Q15008-3|PSMD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.251220703125	3	400.251701	1197.73327	1.9147	0.00076637	-4.3678	-0.0017482	-2.4531	-0.00098184	400.25018945747934	18.297	0.32571	17.82	17.657	17.983	-0.47694					8	6	2	0	0	0	0.74022	1	375	375		24.232	2.5461	1	47285			24637	5845	16592	16602	28246	28246					0.14231689296843797
KVIKGAEILEV	11	Unmodified	_KVIKGAEILEV_					0	0	0		nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-2|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;ENSG00000163636|ENST00000295901|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6;ENST00000497315.5_1_3:64004227-64005057:-|nuORF	nc|ENSG00000163636|Q15008-3|PSMD6	nc|ENSG00000163636|Q15008-3|PSMD6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	400.251701	1197.73327	0.022266	8.912E-06	-1.1557	-0.00046258	-1.1335	-0.00045367	400.2512730022987	18.491	0.26194	17.869	17.722	17.983	-0.62141	0.024716	0.00033029	NaN	24.232	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58199			24638	5845	16592	16602							0.14231689296843797
KVILGVIA	8	Unmodified	_KVILGVIA_					0	0	0		nc|ENSG00000163053|Q7RTX9-2|SLC16A14;ENSG00000163053|ENST00000295190|SLC16A14	nc|ENSG00000163053|Q7RTX9-2|SLC16A14	nc|ENSG00000163053|Q7RTX9-2|SLC16A14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78515625	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.81548	1	1524	1524		20.482	5.8177	1	1817700			24639	5761	16593	16603	28247	28247					0.13981055150497923
KVILLEEP	8	Unmodified	_KVILLEEP_					0	0	0			REV__nc|ENSG00000121903|P17040-3|ZSCAN20	REV__nc|ENSG00000121903|P17040-3|ZSCAN20	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7898254394531	2	470.789318	939.564084	-1.7304	-0.00081466	3.3204	0.0015632	1.5899	0.00074853	470.79068793437676	44.094	1.0357	44.094	43.623	44.659	0					39	24	2	0	0	0	0.80706	1	3177	3177		19.36	1.0356	1	50868	+		24640	18471	16594	16604	28248	28248					0.09188412734135909
KVIPAVSISY	10	Unmodified	_KVIPAVSISY_					0	0	0		ENST00000466983.1_1_9:130869513-130869720:+|nuORF;nc|ENSG00000148339|Q6KCM7-6|SLC25A25;ENSG00000125648|ENST00000301454|SLC25A23;nc|ENSG00000148339|Q6KCM7|SLC25A25;nc|ENSG00000148339|Q6KCM7-4|SLC25A25;nc|ENSG00000148339|Q6KCM7-5|SLC25A25;nc|ENSG00000148339|Q6KCM7-2|SLC25A25;ENSG00000148339|ENST00000373069|SLC25A25	ENST00000466983.1_1_9:130869513-130869720:+|nuORF	ENST00000466983.1_1_9:130869513-130869720:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8190307617188	2	538.82115	1075.62775	0.12859	6.9286E-05	-3.526	-0.0018999	-3.3974	-0.0018306	538.8190273230837	24.689	0.6324	24.361	24.116	24.748	-0.32825					32	13	4	0	0	0	0.5766	1	1207	1207		51.335	3.6781	1	354890			24641	3402	16595	16605	28249	28249					0.09295773171243127
KVITAEKLH	9	Unmodified	_KVITAEKLH_					0	0	0			REV__ENSG00000185950|ENST00000375856|IRS2	REV__ENSG00000185950|ENST00000375856|IRS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.818115234375	2	519.818941	1037.62333	-0.067594	-3.5137E-05	-1.1183	-0.00058132	-1.1859	-0.00061646	519.8182715270425	84.44	1.4919	84.888	84.056	85.547	0.44736					111	36	4	0	0	0	0.55097	1	9926	9926		49.442	5.3247	1	7125200	+		24642	22811	16596	16606	28250	28250					0.10602308748320866
KVIVAVAL	8	Unmodified	_KVIVAVAL_					0	0	0			REV__ENSG00000132953|ENST00000255305|XPO4	REV__ENSG00000132953|ENST00000255305|XPO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7850646972656	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.81548	1	1886	1886		20.482	0	1	1965300	+		24643	19047	16597	16607	28251	28251					0.13981055150509292
KVIVAVAL	8	Unmodified	_KVIVAVAL_					0	0	0			REV__ENSG00000132953|ENST00000255305|XPO4	REV__ENSG00000132953|ENST00000255305|XPO4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7850036621094	2	406.783839	811.553125	0.022938	9.3307E-06	3.6731	0.0014942	3.696	0.0015035	406.7851827724374	33.215	0.93484	33.182	32.78	33.715	-0.032677					97	42	3	0	0	0	0.884	1	1625	1625		33.516	5.2613	1	368720	+		24644	19047	16597	16607	28252	28252					0.13981055150509292
KVIVVWNN	8	Unmodified	_KVIVVWNN_					0	0	0		ENSG00000162694|ENST00000370114|EXTL2	ENSG00000162694|ENST00000370114|EXTL2	ENSG00000162694|ENST00000370114|EXTL2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.26666259765625	2	486.287277	970.560001	-1.0062	-0.00048931	-3.4162	-0.0016613	-4.4224	-0.0021506	486.2853175320356	88.184	1.021	88.184	87.812	88.833	0					39	23	2	0	0	0	0.4196	1	8427	8427		30.504	0	1	64258			24645	5719	16598	16608	28253	28253					0.0735436803107632
KVKALARF	8	Unmodified	_KVKALARF_					0	0	0			REV__ENST00000262839.2_1_X:111325343-111325448:-|nuORF	REV__ENST00000262839.2_1_X:111325343-111325448:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.5392150878906	2	466.805637	931.596721	-1.1623	-0.00054256	2.8389	0.0013252	1.6766	0.00078267	466.8068143673567	30.969	1.0963	31.049	30.59	31.686	0.079834					58	24	3	0	0	0	0.4196	1	2035	2035		20.482	1.1219	1	275010	+		24646	24433	16599	16609	28254	28254					0.12818664647647893
KVKARLIFLDV	11	Unmodified	_KVKARLIFLDV_					0	0	0			REV__ENSG00000181234|ENST00000435159|TMEM132C	REV__ENSG00000181234|ENST00000435159|TMEM132C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.75286865234375	3	434.614974	1300.82309	0.16892	7.3413E-05	-1.5202	-0.00066068	-1.3512	-0.00058727	434.61354141440177	61.896	0.21608	62.45	62.342	62.558	0.55386					5	4	2	0	0	0	0.17955	1	6645	6645		12.957	0.52465	1	22664	+		24647	22448	16600	16610	28255	28255					0.18471363696062326
KVKCFIVALL	10	Unmodified	_KVKCFIVALL_					0	0	0			REV__ENST00000548154.5_1_12:69924680-69955992:+|nuORF	REV__ENST00000548154.5_1_12:69924680-69955992:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297729492188	2	567.359388	1132.70422	-0.51246	-0.00029075	0.36383	0.00020642	-0.14863	-8.4326E-05	567.3596161727289	92.917	0.26068	92.917	92.808	93.069	0					7	5	2	0	0	0	0.37624	1	9144	9144		29.15	16.19	1	62746	+		24648	28562	16601	16611	28256	28256					0.1431787346684814
KVKCFIVALL	10	Unmodified	_KVKCFIVALL_					0	0	0			REV__ENST00000548154.5_1_12:69924680-69955992:+|nuORF	REV__ENST00000548154.5_1_12:69924680-69955992:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3298950195312	2	567.359388	1132.70422	0.79413	0.00045056	1.6786	0.00095238	2.4727	0.0014029	567.3600787148846	92.529	0.16985	92.688	92.581	92.751	0.15875					8	3	3	0	0	0	0.37624	1	9379	9379		23.042	6.5693	1	65161	+		24649	28562	16601	16611	28257	28257					0.1431787346684814
KVKCFIVALL	10	Unmodified	_KVKCFIVALL_					0	0	0			REV__ENST00000548154.5_1_12:69924680-69955992:+|nuORF	REV__ENST00000548154.5_1_12:69924680-69955992:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3300170898438	2	567.359388	1132.70422	0.79052	0.00044851	2.7977	0.0015873	3.5883	0.0020358	567.3601826525191	92.188	0.25529	92.347	92.113	92.369	0.15875					6	5	2	0	0	0	0.37624	1	9295	9295		23.042	6.5693	1	113980	+		24650	28562	16601	16611	28258	28258					0.1431787346684814
KVKEDAQY	8	Unmodified	_KVKEDAQY_					0	0	0			REV__ENSG00000183246|ENST00000433039|RIMBP3C	REV__ENSG00000183246|ENST00000433039|RIMBP3C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.8050231933594	2	490.756007	979.497461	-0.98943	-0.00048557	0.84451	0.00041445	-0.14492	-7.1119E-05	490.7576691354908	27.864	0.38621	27.767	27.663	28.049	-0.096947					11	8	2	0	0	0	0.4196	1	1667	1667		40.778	1.5253	1	49155	+		24651	22587	16602	16612	28259	28259					0.006891771722280282
KVKEERKN	8	Unmodified	_KVKEERKN_					0	0	0			REV__nc|ENSG00000111679|P29350-2|PTPN6	REV__nc|ENSG00000111679|P29350-2|PTPN6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.803466796875	2	515.803823	1029.59309	0.78398	0.00040438	-0.88024	-0.00045403	-0.096256	-4.9649E-05	515.8032269783904	23.016	0.76294	22.442	22.157	22.92	-0.57415					45	18	4	0	0	0	0.9295	1	1000	1000		55.504	0.42029	1	679090	+		24652	17887	16603	16613	28260	28260					0.07947950083143951
KVKEKKETSG	10	Unmodified	_KVKEKKETSG_					0	0	0			REV__nc|ENSG00000043143|Q9NQC1-3|JADE2	REV__nc|ENSG00000043143|Q9NQC1-3|JADE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3301391601562	2	567.32987	1132.64519	1.492	0.00084643	-1.3496	-0.00076566	0.14237	8.0771E-05	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.63899	1	9217	9217		47.96	8.7067	1	5346500	+		24653	16335	16604	16614	28261	28261					0.08417068706239661
KVKELCAK	8	Unmodified	_KVKELCAK_					0	0	0		nc|ENSG00000163554|P02549-2|SPTA1;ENSG00000163554|ENST00000643759|SPTA1	nc|ENSG00000163554|P02549-2|SPTA1	nc|ENSG00000163554|P02549-2|SPTA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.7742004394531	2	459.775688	917.536823	0.81873	0.00037643	-3.6521	-0.0016791	-2.8334	-0.0013027	459.77409773273206	23.443	1.147	22.869	21.947	23.094	-0.57415					40	27	3	0	0	0	0.92394	1	1048	1048		47.657	1.6851	1	173400			24654	5824	16605	16615	28262	28262					0.07475605922104478
KVKFLRTNFV	10	Unmodified	_KVKFLRTNFV_					0	0	0			REV__ENST00000523821.5_1_8:97251721-97252051:-|nuORF	REV__ENST00000523821.5_1_8:97251721-97252051:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.379638671875	2	626.38224	1250.74993	-1.2034	-0.00075376	-2.9346	-0.0018382	-4.138	-0.002592	626.3802975335307	105.63	2.6046	105.7	104.93	107.53	0.073112					329	63	6	0	0	0	0.85981	1	11452	11452		35.152	3.6222	1	74722000	+		24655	20488	16606	16616	28263	28263					0.1345823497345009
KVKGDTIKSSA	11	Unmodified	_KVKGDTIKSSA_					0	0	0			REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3298950195312	2	567.32987	1132.64519	1.497	0.00084932	-1.6772	-0.00095153	-0.18017	-0.00010222	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.7144	1	9671	9671		29.17	4.6509	1	15259000	+		24656	21450	16607	16617	28264	28264					0.08417068706239661
KVKKAAKP	8	Unmodified	_KVKKAAKP_					0	0	0		ENSG00000184897|ENST00000333762|H1-10	ENSG00000184897|ENST00000333762|H1-10	ENSG00000184897|ENST00000333762|H1-10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.30029296875	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.80706	1	8063	8063		19.36	10.538	1	5485100			24657	7650	16608	16618	28265	28265					0.14627262273347696
KVKKASGLSSA	11	Unmodified	_KVKKASGLSSA_					0	0	0		ENST00000267615.10_1_14:93406548-93406620:-|nuORF	ENST00000267615.10_1_14:93406548-93406620:-|nuORF	ENST00000267615.10_1_14:93406548-93406620:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3267822265625	2	538.327131	1074.63971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.06	1	116.09	115.59	116.59	0.026466								0	0	0	0.56276	1	12745	12745		18.262	2.6203	1				24658	9529	16609	16619	28266	28266					0.10537389914429696
KVKKHKKK	8	Unmodified	_KVKKHKKK_					0	0	0		nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN;ENSG00000092853|ENST00000318121|CLSPN;chr1:35762481-35763160|63|106.24|0.99|6.75|-|0|CLSPN,CLSPN|1	nc|ENSG00000092853|Q9HAW4-2|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.359375	2	512.361111	1022.70767	-0.13841	-7.0915E-05	0.35065	0.00017966	0.21225	0.00010875	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.81724	1	7346	7346		14.664	1.7049	1	293160			24659	1705	16610	16620	28267	28267					0.19722304355730103
KVKKKKRKK	9	Unmodified	_KVKKKKRKK_					0	0	0		nc|ENSG00000187624|Q6ZQX7-2|LIAT1;ENSG00000187624|ENST00000360127|C17orf97;nc|ENSG00000187624|Q6ZQX7-3|LIAT1;nc|ENSG00000187624|Q6ZQX7|LIAT1	nc|ENSG00000187624|Q6ZQX7-2|LIAT1	nc|ENSG00000187624|Q6ZQX7-2|LIAT1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.933349609375	2	585.929692	1169.84483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.34	1	94.772	94.272	95.272	0.4324								0	0	0	0.3718	1	11258	11258		1.2052	0	1				24660	7866	16611	16621	28268	28268					0.26670213235297524
KVKKQPLSSG	10	Unmodified	_KVKKQPLSSG_					0	0	0			REV__ENST00000415681.1_1_6:55804812-55805085:-|nuORF	REV__ENST00000415681.1_1_6:55804812-55805085:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	536.32861328125	2	536.329673	1070.64479	0.99919	0.0005359	-1.1108	-0.00059577	-0.11163	-5.9872E-05	536.3288651192009	17.738	0.39529	17.659	17.545	17.94	-0.078943					36	17	3	0	0	0	0.57924	1	261	261		51.193	1.7511	1	258950	+		24661	26423	16612	16622	28269	28269					0.11229693777045213
KVKLKVGKKKP	11	Unmodified	_KVKLKVGKKKP_					0	0	0		nc|ENSG00000136891|Q9NXF1-2|TEX10;ENSG00000136891|ENST00000374902|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2969665527344	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.812	1	77.381	76.881	77.881	0.56836								0	0	0	0.56276	1	8757	8757		9.2118	3.7989	1				24662	4153	16613	16623	28270	28270					0.25959946829675573
KVKLKVGKKKP	11	Unmodified	_KVKLKVGKKKP_					0	0	0		nc|ENSG00000136891|Q9NXF1-2|TEX10;ENSG00000136891|ENST00000374902|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2966003417969	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.879	1	77.448	76.948	77.948	0.56836								0	0	0	0.56276	1	8766	8766		8.0344	3.1482	1				24663	4153	16613	16623	28271	28271					0.25959946829675573
KVKLRAHRE	9	Unmodified	_KVKLRAHRE_					0	0	0		ENSG00000164619|ENST00000649409|BMPER	ENSG00000164619|ENST00000649409|BMPER	ENSG00000164619|ENST00000649409|BMPER	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8535766601562	2	568.854181	1135.69381	0.52259	0.00029728	-2.4856	-0.0014139	-1.963	-0.0011166	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.78983	1	11011	11011		27.882	1.0861	1	84800000			24664	5980	16614	16624	28272	28272					0.13139026856629243
KVKLSVNM	8	Unmodified	_KVKLSVNM_					0	0	0		ENST00000506566.1_1_4:130824308-130824734:+|nuORF	ENST00000506566.1_1_4:130824308-130824734:+|nuORF	ENST00000506566.1_1_4:130824308-130824734:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	459.7734680175781	2	459.775688	917.536823	0.028893	1.3284E-05	-1.2642	-0.00058125	-1.2353	-0.00056796	459.7751638875668	23.478	2.1548	23.096	22.267	24.422	-0.38178					65	49	3	0	0	0	0.83456	1	1045	1045		60.972	5.4677	1	143350			24665	12939	16615	16625	28273	28273					0.07475605922115847
KVKLWQVLPK	10	Unmodified	_KVKLWQVLPK_					0	0	0			REV__ENSG00000066230|ENST00000264938|SLC9A3	REV__ENSG00000066230|ENST00000264938|SLC9A3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7667541503906	3	413.604298	1237.79106	-0.24944	-0.00010317	0.94145	0.00038939	0.69201	0.00028622	413.6045786367424	41.124	0.89927	41.078	40.894	41.793	-0.045471					40	27	2	0	0	0	0.37624	1	2712	2712		14.694	0	1	164790	+		24666	16519	16616	16626	28274	28274					0.1816799601292587
KVKMHLHGI	9	Unmodified	_KVKMHLHGI_					0	0	0		ENST00000424408.6_1_6:112443358-112450212:-|nuORF	ENST00000424408.6_1_6:112443358-112450212:-|nuORF	ENST00000424408.6_1_6:112443358-112450212:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8165283203125	2	531.815679	1061.6168	1.0296	0.00054754	1.2167	0.00064705	2.2462	0.0011946	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.7932	1	8732	8732		25.45	2.4077	1	1241100			24667	11514	16617	16627	28275	28275					0.08846092315957321
KVKMQKLTE	9	Unmodified	_KVKMQKLTE_					0	0	0			REV__ENST00000448942.5_1_6:138178656-138178794:-|nuORF	REV__ENST00000448942.5_1_6:138178656-138178794:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.7626342773438	2	552.825909	1103.63727	-1.0987	-0.00060739	-3.2141	-0.0017769	-4.3128	-0.0023842	553.326312621887	46.006	0.12095	46.477	46.375	46.496	0.47139					4	2	2	0	0	0	0.20789	1	4301	4301		16.473	0	1	84280	+		24668	26847	16618	16628	28276	28276					0.08959218185100326
KVKNHSGGG	9	Unmodified	_KVKNHSGGG_					0	0	0		nc|ENSG00000165359|Q5JSJ4|INTS6L;ENSG00000165359|ENST00000639893|INTS6L	nc|ENSG00000165359|Q5JSJ4|INTS6L	nc|ENSG00000165359|Q5JSJ4|INTS6L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24090576171875	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.67345	1	7532	7532		42.396	3.59	1	716910			24669	6075	16619	16629	28277	28277					0.021228632977113193
KVKPAKAK	8	Unmodified	_KVKPAKAK_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30029296875	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.80706	1	6933	6933		19.36	3.7238	1	1921500	+		24670	18623	16620	16630	28278	28278					0.14627262273359065
KVKPAKAK	8	Unmodified	_KVKPAKAK_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3002624511719	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.79929	1	6712	6712		18.324	3.6603	1	2081500	+		24671	18623	16620	16630	28279	28279					0.14627262273359065
KVKPMKLH	8	Unmodified	_KVKPMKLH_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.8050231933594	2	490.807322	979.600092	-1.0263	-0.0005037	-2.182	-0.0010709	-3.2083	-0.0015746	490.8060539311396	28.103	0.63312	28.006	27.707	28.34	-0.096945					28	14	3	0	0	0	0.884	1	1667	1667		33.516	3.0119	1	206040	+		24672	18623	16621	16631	28280	28280					0.10947591429999193
KVKQDVKNLK	10	Unmodified	_KVKQDVKNLK_					0	0	0			REV__ENSG00000126814|ENST00000261249|TRMT5	REV__ENSG00000126814|ENST00000261249|TRMT5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.58721923828125	3	400.587195	1198.73976	1.8013	0.00072159	-1.1968	-0.00047943	0.6045	0.00024216	400.58659535755095	16.247	0.39933	15.759	15.607	16.006	-0.48718					12	8	2	0	0	0	0.85692	1	114	114		36.318	0	1	131560	+		24673	18713	16622	16632	28281	28281					0.1483362724820836
KVKQDVKNLK	10	Unmodified	_KVKQDVKNLK_					0	0	0			REV__ENSG00000126814|ENST00000261249|TRMT5	REV__ENSG00000126814|ENST00000261249|TRMT5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.5864562988281	3	400.587195	1198.73976	0.18537	7.4256E-05	0.41784	0.00016738	0.60321	0.00024164	400.5871088639427	16.252	0.32049	15.653	15.465	15.786	-0.59873					15	6	3	0	0	0	0.65251	1	103	103		47.228	2.2055	1	117070	+		24674	18713	16622	16632	28282	28282					0.1483362724820836
KVKRKKHK	8	Unmodified	_KVKRKKHK_					0	0	0			REV__ENST00000447672.1_1_9:75356163-75356322:-|nuORF	REV__ENST00000447672.1_1_9:75356163-75356322:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3604736328125	2	526.364185	1050.71382	-1.5421	-0.00081169	-4.0982	-0.0021571	-5.6402	-0.0029688	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.80706	1	2159	2159		19.36	0	1	788470	+		24675	26825	16623	16633	28283	28283					0.1904882258725138
KVKRLKNAMVH	11	Unmodified	_KVKRLKNAMVH_					0	0	0			REV__ENSG00000137628|ENST00000393743|DDX60	REV__ENSG00000137628|ENST00000393743|DDX60	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.27392578125	3	441.939575	1322.79689	-1.6543	-0.0007311	2.3667	0.0010459	0.71239	0.00031483	441.9404880038731	55.736	1.19	55.736	54.998	56.188	0					100	33	4	0	0	0	0.76892	1	4682	4682		17.833	0.36513	1	347630	+		24676	19395	16624	16634	28284	28284					0.1484077125294334
KVKRLKNAMVH	11	Unmodified	_KVKRLKNAMVH_					0	0	0			REV__ENSG00000137628|ENST00000393743|DDX60	REV__ENSG00000137628|ENST00000393743|DDX60	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.9385986328125	3	441.939575	1322.79689	-0.1083	-4.7863E-05	0.67692	0.00029916	0.56862	0.0002513	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.76251	2	4871	4871;4947		19.263	0.73163	1	447080	+		24677	19395	16624	16634	28285;28286	28285					0.1484077125294334
KVKRLKNAMVH	11	Unmodified	_KVKRLKNAMVH_					0	0	0			REV__ENSG00000137628|ENST00000393743|DDX60	REV__ENSG00000137628|ENST00000393743|DDX60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2738342285156	3	441.939575	1322.79689	0.33265	0.00014701	0.17058	7.5386E-05	0.50323	0.0002224	441.9395069624772	55.282	1.2267	55.373	54.736	55.962	0.091167					101	37	4	0	0	0	0.76892	1	4566	4566		17.833	4.8757	1	451030	+		24678	19395	16624	16634	28287	28287					0.1484077125294334
KVKRLKVKRA	10	Unmodified	_KVKRLKVKRA_					0	0	0		ENSG00000275793|ENST00000619918|RIMBP3;ENSG00000274600|ENST00000620804|RIMBP3B;ENSG00000183246|ENST00000433039|RIMBP3C	ENSG00000275793|ENST00000619918|RIMBP3	ENSG00000275793|ENST00000619918|RIMBP3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	409.2926025390625	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.013	1	19.082	18.582	19.582	0.068884								0	0	0	0.45132	1	393	393		4.0829	0.6742	1				24679	7511	16625	16635	28288	28288					0.24721311746975516
KVKRLKVKRA	10	Unmodified	_KVKRLKVKRA_					0	0	0		ENSG00000275793|ENST00000619918|RIMBP3;ENSG00000274600|ENST00000620804|RIMBP3B;ENSG00000183246|ENST00000433039|RIMBP3C	ENSG00000275793|ENST00000619918|RIMBP3	ENSG00000275793|ENST00000619918|RIMBP3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.2922058105469	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.996	1	19.526	19.026	20.026	-0.46967								0	0	0	0.45132	1	588	588		9.6461	0	1				24680	7511	16625	16635	28289	28289					0.24721311746975516
KVKRLKVKRA	10	Unmodified	_KVKRLKVKRA_					0	0	0		ENSG00000275793|ENST00000619918|RIMBP3;ENSG00000274600|ENST00000620804|RIMBP3B;ENSG00000183246|ENST00000433039|RIMBP3C	ENSG00000275793|ENST00000619918|RIMBP3	ENSG00000275793|ENST00000619918|RIMBP3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.29217529296875	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.18	1	19.721	19.221	20.221	-0.4591								0	0	0	0.45132	1	612	612		6.6596	0	1				24681	7511	16625	16635	28290	28290					0.24721311746975516
KVKRLKVKRA	10	Unmodified	_KVKRLKVKRA_					0	0	0		ENSG00000275793|ENST00000619918|RIMBP3;ENSG00000274600|ENST00000620804|RIMBP3B;ENSG00000183246|ENST00000433039|RIMBP3C	ENSG00000275793|ENST00000619918|RIMBP3	ENSG00000275793|ENST00000619918|RIMBP3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2919616699219	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.343	1	19.713	19.213	20.213	-0.6296								0	0	0	0.45132	1	639	639		3.8434	1.9565	1				24682	7511	16625	16635	28291	28291					0.24721311746975516
KVKSLECLPP	10	Unmodified	_KVKSLECLPP_					0	0	0		ENST00000495716.1_1_3:52407964-52408519:+|nuORF	ENST00000495716.1_1_3:52407964-52408519:+|nuORF	ENST00000495716.1_1_3:52407964-52408519:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.2384033203125	2	557.32046	1112.62637	-0.44428	-0.00024761	3.8857	0.0021656	3.4414	0.001918	557.322590609542	27.911	0.52702	27.947	27.696	28.223	0.03607					27	18	2	0	0	0	0.37624	1	1322	1322		11.511	5.1984	1	54882			24683	12772	16626	16636	28292	28292					0.07455815810817512
KVKTAFGRML	10	Unmodified	_KVKTAFGRML_					0	0	0		ENSG00000163632|ENST00000295896|C3orf49	ENSG00000163632|ENST00000295896|C3orf49	ENSG00000163632|ENST00000295896|C3orf49	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8430786132812	2	575.841894	1149.66923	0.91732	0.00052823	0.78637	0.00045282	1.7037	0.00098106	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.86348	1	9617	9617		31.53	3.6476	1	5468500			24684	5842	16627	16637	28293	28293					0.10038630658914371
KVKVEEEE	8	Unmodified	_KVKVEEEE_					0	0	0		ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2598876953125	2	495.261122	988.507691	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.793	1	36.041	35.541	36.541	0.24769								0	0	0	0.29497	1	2763	2763		34.173	0.65696	1				24685	1023	16628	16638	28294	28294					0.012977401068042127
KVKVSVTSP	9	Unmodified	_KVKVSVTSP_					0	0	0		ENSG00000153779|ENST00000283891|TGIF2LX	ENSG00000153779|ENST00000283891|TGIF2LX	ENSG00000153779|ENST00000283891|TGIF2LX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7939147949219	2	472.792392	943.570232	0.0067678	3.1997E-06	0.020105	9.5055E-06	0.026873	1.2705E-05	472.79235257019036	26.57	0.85389	26.394	25.983	26.837	-0.17559					29	18	2	0	0	0	0.78983	1	1484	1484		27.882	0	1	145100			24686	5240	16629	16639	28295	28295					0.0961893096566655
KVKWSTFPF	9	Unmodified	_KVKWSTFPF_					0	0	0			REV__ENSG00000159063|ENST00000299626|ALG8	REV__ENSG00000159063|ENST00000299626|ALG8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.7821655273438	2	570.316035	1138.61752	-0.90822	-0.00051798	-2.4285	-0.001385	-3.3367	-0.001903	570.3146006971866	32.241	0.63742	32.252	31.854	32.492	0.010902					39	18	3	0	0	0	0.20789	1	1771	1771		39.253	35.268	1	47365	+		24687	20633	16630	16640	28296	28296					0.05375210236661587
KVKWSTFPF	9	Unmodified	_KVKWSTFPF_					0	0	0			REV__ENSG00000159063|ENST00000299626|ALG8	REV__ENSG00000159063|ENST00000299626|ALG8	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	570.316035	1138.61752	-0.15465	-8.8199E-05	-3.0865	-0.0017603	-3.2411	-0.0018485	570.3143198485992	32.367	0.52489	32.313	32.057	32.582	-0.05434	0.061068	-8.6318E-05	NaN	39.253	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63040	+		24688	20633	16630	16640							0.05375210236661587
KVLAVLEP	8	Unmodified	_KVLAVLEP_					0	0	0			REV__nc|ENSG00000152904|O95749-2|GGPS1	REV__nc|ENSG00000152904|O95749-2|GGPS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7802429199219	2	434.778754	867.542954	0.083396	3.6259E-05	3.2514	0.0014137	3.3348	0.0014499	434.78005466270537	34.317	1.0002	34.271	33.763	34.763	-0.045815					125	41	4	0	0	0	0.86288	1	1707	1707		26.796	0	1	3033400	+		24689	20320	16631	16641	28297	28297					0.10388447425282266
KVLDAIIQEK	10	Unmodified	_KVLDAIIQEK_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.848876953125	2	578.850438	1155.68632	-1.5045	-0.00087091	-0.36057	-0.00020871	-1.8651	-0.0010796	578.8503186649035	44.216	0.57048	44.667	44.362	44.932	0.45024					30	13	3	0	0	0	0.043689	2	4041	4029;4041		109.83	26.999	1	1193400			24690	2747	16632	16642	28298;28299	28299					0.11470829745667288
KVLDAIIQEK	10	Unmodified	_KVLDAIIQEK_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.8489990234375	2	578.850438	1155.68632	-2.1901	-0.0012677	0.24408	0.00014129	-1.946	-0.0011265	578.8505733357642	43.985	0.61133	44.758	44.424	45.036	0.7738					32	14	3	0	0	0	0.0072134	2	4024	4012;4024		133.75	38.269	1	1177100			24691	2747	16632	16642	28300;28301	28301					0.11470829745667288
KVLDTIMATKL	11	Unmodified	_KVLDTIMATKL_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	616.867431640625	2	616.867774	1231.72099	-0.64271	-0.00039647	0.7383	0.00045543	0.095587	5.8965E-05	616.8681166602604	58.326	0.9623	58.718	58.356	59.318	0.39209					65	22	4	0	0	0	4.0825E-29	5	6103	6081;6091;6103;6114;6126		183.85	94.55	1	2850800			24692	6838	16633	16643	28302;28303;28304;28305;28306	28304					0.11440329562128682
KVLDTIMATKL	11	Unmodified	_KVLDTIMATKL_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	616.8678588867188	2	616.867774	1231.72099	0.64557	0.00039823	-0.51098	-0.00031521	0.13459	8.3026E-05	616.8672982406372	58.19	0.95551	58.743	58.387	59.343	0.55323					61	22	4	0	0	0	4.2063E-20	5	6101	6081;6090;6101;6113;6125		166.86	93.951	1	2995400			24693	6838	16633	16643	28307;28308;28309;28310;28311	28309					0.11440329562128682
KVLEAHLGDP	10	Unmodified	_KVLEAHLGDP_					0	0	0		ENSG00000140943|ENST00000343411|MBTPS1;ENST00000562886.1_1_16:84088056-84093058:-|nuORF	ENSG00000140943|ENST00000343411|MBTPS1	ENSG00000140943|ENST00000343411|MBTPS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.801025390625	2	539.798206	1077.58186	-0.55561	-0.00029991	3.4821	0.0018796	2.9265	0.0015797	539.8000768252025	26.693	0.58709	26.517	26.205	26.792	-0.17559					20	12	2	0	0	0	0.8545	1	1501	1501		36.447	0	1	151800			24694	4467	16634	16644	28312	28312					0.0461712798901317
KVLGMRRGL	9	Unmodified	_KVLGMRRGL_					0	0	0		nc|ENSG00000137804|Q9BXS6-7|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;ENST00000558123.5_1_15:41625112-41672381:+|nuORF;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;ENSG00000137804|ENST00000559596|NUSAP1	nc|ENSG00000137804|Q9BXS6-7|NUSAP1	nc|ENSG00000137804|Q9BXS6-7|NUSAP1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	515.318603515625	2	515.321128	1028.6277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.267	1	16.345	15.845	16.845	0.077959								0	0	0	0.33676	1	85	85		18.324	2.6826	1				24695	14946	16635	16645	28313	28313					0.114534946902495
KVLGSIIRNPL	11	Unmodified	_KVLGSIIRNPL_					0	0	0			REV__ENSG00000131781|ENST00000254090|FMO5;REV__nc|ENSG00000131781|P49326-3|FMO5	REV__nc|ENSG00000131781|P49326-3|FMO5	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9295654296875	3	403.92744	1208.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.32	1	48.317	47.817	48.817	-0.002449								0	0	0	0.56276	1	4014	4014		27.644	5.0823	1		+		24696	29844;18966	16636	16646	28314	28314					0.16446217627890292
KVLGSQARVT	10	Unmodified	_KVLGSQARVT_					0	0	0		ENST00000511482.1_1_5:306832-313953:+|nuORF	ENST00000511482.1_1_5:306832-313953:+|nuORF	ENST00000511482.1_1_5:306832-313953:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.8214111328125	2	529.819473	1057.62439	2.384	0.0012631	0.065546	3.4727E-05	2.4495	0.0012978	529.8193122554347	104.74	1.2264	104.9	104.04	105.27	0.15583					44	30	2	0	0	0	0.86106	1	12772	12772		33.922	0.40605	1	320740			24697	13020	16637	16647	28315	28315					0.09788523117231307
KVLHDKQRGPL	11	Unmodified	_KVLHDKQRGPL_					0	0	0		nc|ENSG00000164347|Q969S9-5|GFM2;nc|ENSG00000164347|Q969S9-4|GFM2;nc|ENSG00000164347|Q969S9-3|GFM2;ENSG00000164347|ENST00000296805|GFM2	nc|ENSG00000164347|Q969S9-5|GFM2	nc|ENSG00000164347|Q969S9-5|GFM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	645.8841552734375	2	645.885678	1289.7568	0.94469	0.00061016	-3.1472	-0.0020327	-2.2025	-0.0014226	645.8834905061026	106.24	1.3631	106.34	106.15	107.51	0.099007					90	32	3	0	0	0	0.72106	1	11389	11389		28.081	0.19925	1	2119300			24698	5961	16638	16648	28316	28316					0.12351547854018463
KVLHDKQRGPL	11	Unmodified	_KVLHDKQRGPL_					0	0	0		nc|ENSG00000164347|Q969S9-5|GFM2;nc|ENSG00000164347|Q969S9-4|GFM2;nc|ENSG00000164347|Q969S9-3|GFM2;ENSG00000164347|ENST00000296805|GFM2	nc|ENSG00000164347|Q969S9-5|GFM2	nc|ENSG00000164347|Q969S9-5|GFM2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	645.885678	1289.7568	1.6038	0.0010358	-3.8625	-0.0024948	-2.2588	-0.0014589	645.883055143737	106.2	1.4677	106.35	106.11	107.58	0.14843	-0.00824	-0.0017135	NaN	28.081	85	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1160800			24699	5961	16638	16648							0.12351547854018463
KVLIDGVSH	9	Unmodified	_KVLIDGVSH_					0	0	0			REV__ENST00000515359.6_1_3:49571657-49571711:+|nuORF	REV__ENST00000515359.6_1_3:49571657-49571711:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7102355957031	2	484.282192	966.549831	-1.52	-0.0007361	0.23139	0.00011206	-1.2886	-0.00062404	484.2825122045403	88.717	0.39812	89.188	88.916	89.314	0.47068					14	9	2	0	0	0	0.20789	1	10470	10470		37.159	12.64	1	66352	+		24700	28029	16639	16649	28317	28317					0.06521760305861335
KVLIILLG	8	Unmodified	_KVLIILLG_					0	0	0			REV__ENST00000392710.8_1_17:66526103-66526435:+|nuORF	REV__ENST00000392710.8_1_17:66526103-66526435:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7802734375	2	434.815139	867.615725	1.3781	0.0005992	2.845	0.001237	4.223	0.0018362	434.81623060504927	33.846	0.12374	34.151	34.076	34.2	0.30494					4	2	2	0	0	0	0.4196	1	2485	2485		8.8223	0	1	30182	+		24701	26029	16640	16650	28318	28318					0.17662201218695373
KVLILHTDMLL	11	Unmodified	_KVLILHTDMLL_					0	0	0		nc|ENSG00000120498|Q8IYF3-2|TEX11;ENSG00000120498|ENST00000374333|TEX11;nc|ENSG00000120498|Q8IYF3|TEX11	nc|ENSG00000120498|Q8IYF3-2|TEX11	nc|ENSG00000120498|Q8IYF3-2|TEX11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3959350585938	2	648.391416	1294.76828	-1.1411	-0.00073988	2.5898	0.0016792	1.4487	0.0009393	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.73893	1	12306	12306		24.519	0.99649	1	2297700			24702	3132	16641	16651	28319	28319					0.13268608833141116
KVLIPKKHAPK	11	Unmodified	_KVLIPKKHAPK_					0	0	0			REV__nc|ENSG00000170381|O15041-2|SEMA3E	REV__nc|ENSG00000170381|O15041-2|SEMA3E	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.75439453125	3	420.283447	1257.82851	1.2171	0.00051155	-1.0783	-0.0004532	0.13883	5.8346E-05	420.2829526317003	21.914	0.66297	21.471	21.145	21.808	-0.44324					27	14	3	0	0	0	0.17243	1	801	801		12.433	0	1	69987	+		24703	21653	16642	16652	28320	28320					0.20991087278548548
KVLISPPA	8	Unmodified	_KVLISPPA_					0	0	0			REV__ENSG00000156463|ENST00000359120|SH3RF2	REV__ENSG00000156463|ENST00000359120|SH3RF2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7668151855469	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.071	1	42.041	41.541	42.541	-0.029949								0	0	0	0.29568	1	3117	3117		35.201	3.2459	1		+		24704	20487	16643	16653	28321	28321					0.09792178253792372
KVLISPPA	8	Unmodified	_KVLISPPA_					0	0	0			REV__ENSG00000156463|ENST00000359120|SH3RF2	REV__ENSG00000156463|ENST00000359120|SH3RF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76690673828125	2	412.765646	823.516739	-1.2234	-0.00050499	3.8954	0.0016079	2.6719	0.0011029	412.7673243915212	41.944	1.8566	41.905	41.33	43.186	-0.038223					75	44	2	0	0	0	0.91005	1	3178	3178		42.474	3.453	1	796850	+		24705	20487	16643	16653	28322	28322					0.09792178253792372
KVLITLGQYKF	11	Unmodified	_KVLITLGQYKF_					0	0	0			REV__nc|ENSG00000176884|Q05586-2|GRIN1	REV__nc|ENSG00000176884|Q05586-2|GRIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677001953125	3	437.267463	1308.78056	-0.071191	-3.113E-05	1.0412	0.0004553	0.97004	0.00042417	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.74771	1	4470	4470		22.562	0.78116	1	3270700	+		24706	22149	16644	16654	28323	28323					0.13851968567837503
KVLITLGQYKF	11	Unmodified	_KVLITLGQYKF_					0	0	0			REV__nc|ENSG00000176884|Q05586-2|GRIN1	REV__nc|ENSG00000176884|Q05586-2|GRIN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2674255371094	3	437.267463	1308.78056	-0.13248	-5.7929E-05	0.78917	0.00034508	0.65669	0.00028715	437.26771661657114	51.155	1.5796	51.59	50.873	52.452	0.43505					109	37	4	0	0	0	0.74771	2	5071	5023;5071		22.562	0	1	2614800	+		24707	22149	16644	16654	28324;28325	28325					0.13851968567837503
KVLKPLVF	8	Unmodified	_KVLKPLVF_					0	0	0			REV__ENSG00000132669|ENST00000255006|RIN2	REV__ENSG00000132669|ENST00000255006|RIN2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2875671386719	2	472.320589	942.626624	-0.97406	-0.00046007	1.092	0.00051576	0.1179	5.5688E-05	472.32103916701607	95.508	0.5155	95.508	95.27	95.785	0					16	11	2	0	0	0	0.4196	1	9541	9541		4.3163	0	1	118300	+		24708	19019	16645	16655	28326	28326					0.15301603592979518
KVLKSGQLD	9	Unmodified	_KVLKSGQLD_					0	0	0		chr17:28642075-28642275|22|14.09|0.48|4.87|-|0|None,BLTP2|1	chr17:28642075-28642275|22|14.09|0.48|4.87|-|0|None,BLTP2|1	chr17:28642075-28642275|22|14.09|0.48|4.87|-|0|None,BLTP2|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.23602294921875	2	494.295299	986.576045	-1.0031	-0.00049582	3.408	0.0016846	2.4049	0.0011887	494.2958274028245	22.399	0.18141	22.342	22.191	22.372	-0.057203					9	7	2	0	0	0	0.20789	1	677	677		37.812	4.9991	1	18472			24709	220	16646	16656	28327	28327					0.08222029477337855
KVLKWFISAF	10	Unmodified	_KVLKWFISAF_					0	0	0			REV__ENST00000255305.10_3_13:21436952-21442818:-|nuORF	REV__ENST00000255305.10_3_13:21436952-21442818:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8697509765625	2	619.868434	1237.72232	1.7162	0.0010638	0.14874	9.2199E-05	1.8649	0.001156	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.8651	1	11566	11566		25.574	4.6271	1	4719500	+		24710	24319	16647	16657	28328	28328					0.11296331713219843
KVLLINAIPK	10	Unmodified	_KVLLINAIPK_					0	0	0			REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|9|1|sense	REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|9|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.7881469726562	2	554.876259	1107.73797	-0.22216	-0.00012327	0.38219	0.00021207	0.16003	8.8796E-05	554.8763240552998	51.948	0.74389	52.371	51.979	52.723	0.42348					33	17	3	0	0	0	0.37624	1	5178	5178		47.657	0	1	766200	+		24711	29514	16648	16658	28329	28329					0.18840618230251494
KVLLLGLG	8	Unmodified	_KVLLLGLG_					0	0	0		ENST00000479866.5_1_12:48143124-48152369:-|nuORF	ENST00000479866.5_1_12:48143124-48152369:-|nuORF	ENST00000479866.5_1_12:48143124-48152369:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.80963	1	1969	1969		15.636	0.97212	1	1953100			24712	12422	16649	16659	28330	28330					0.1398105515052066
KVLLLGLG	8	Unmodified	_KVLLLGLG_					0	0	0		ENST00000479866.5_1_12:48143124-48152369:-|nuORF	ENST00000479866.5_1_12:48143124-48152369:-|nuORF	ENST00000479866.5_1_12:48143124-48152369:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78515625	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.069	1	31.181	30.681	31.681	0.11198								0	0	0	0.31173	1	1405	1405		9.4706	0	1				24713	12422	16649	16659	28331	28331					0.1398105515052066
KVLLLGLG	8	Unmodified	_KVLLLGLG_					0	0	0		ENST00000479866.5_1_12:48143124-48152369:-|nuORF	ENST00000479866.5_1_12:48143124-48152369:-|nuORF	ENST00000479866.5_1_12:48143124-48152369:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852783203125	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.385	1	31.497	30.997	31.997	0.11198								0	0	0	0.30004	1	1435	1435		21.702	2.3424	1				24714	12422	16649	16659	28332	28332					0.1398105515052066
KVLLLGLG	8	Unmodified	_KVLLLGLG_					0	0	0		ENST00000479866.5_1_12:48143124-48152369:-|nuORF	ENST00000479866.5_1_12:48143124-48152369:-|nuORF	ENST00000479866.5_1_12:48143124-48152369:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852783203125	2	406.783839	811.553125	0.022938	9.3307E-06	3.6731	0.0014942	3.696	0.0015035	406.7851827724374	33.215	0.93484	33.182	32.78	33.715	-0.032677					97	42	3	0	0	0	0.80963	1	1607	1607		15.636	0.97212	1	368720			24715	12422	16649	16659	28333	28333					0.1398105515052066
KVLLVLPFGNA	11	Unmodified	_KVLLVLPFGNA_					0	0	0			REV__ENST00000472135.2_1_X:83695455-83724556:-|nuORF	REV__ENST00000472135.2_1_X:83695455-83724556:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.8660888671875	2	585.865892	1169.71723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.072	1	26.896	26.396	27.396	-0.17559								0	0	0	0.56276	1	1532	1532		31.53	1.2121	1		+		24716	27253	16650	16660	28334	28334					0.13916027850632418
KVLLVRSF	8	Unmodified	_KVLLVRSF_					0	0	0		ENST00000484153.1_1_1:11826815-11837330:+|nuORF;ENSG00000215910|ENST00000688073|C1orf167;nc|nan|Q5SNV9-2|C1orf167;nc|nan|Q5SNV9-3|C1orf167	ENST00000484153.1_1_1:11826815-11837330:+|nuORF	ENST00000484153.1_1_1:11826815-11837330:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.4211120605469	2	481.313295	960.612037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.71	1	18.686	18.186	19.186	-0.024035								0	0	0	0.29498	1	357	357		26.796	1.3459	1				24717	8656	16651	16661	28335	28335					0.130155314448416
KVLNKVCV	8	Unmodified	_KVLNKVCV_					0	0	0			REV__ENSG00000198691|ENST00000370225|ABCA4	REV__ENSG00000198691|ENST00000370225|ABCA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7799072265625	2	451.778231	901.541908	1.0261	0.00046357	2.9325	0.0013249	3.9586	0.0017884	451.779676395938	86.614	1.2405	86.669	86.189	87.43	0.055641					81	28	4	0	0	0	0.87922	1	8822	8822		31.955	2.8053	1	295460	+		24718	23357	16652	16662	28336	28336					0.08719909784724678
KVLPIPVLSDN	11	Unmodified	_KVLPIPVLSDN_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD;nc|ENSG00000127838|Q8N490-4|PNKD;ENSG00000127838|ENST00000273077|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.856201171875	2	597.858264	1193.70197	-0.32365	-0.0001935	-2.0329	-0.0012154	-2.3566	-0.0014089	598.3588954923197	94.611	4.9065	94.611	93.622	98.528	0					293	115	3	0	0	0	0.68532	1	9500	9500		33.922	3.6039	1	5706300			24719	14897	16653	16663	28337	28337					0.11287116262769814
KVLPIPVLSDN	11	Unmodified	_KVLPIPVLSDN_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD;nc|ENSG00000127838|Q8N490-4|PNKD;ENSG00000127838|ENST00000273077|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8561401367188	2	597.858264	1193.70197	-0.56163	-0.00033577	-2.7129	-0.0016219	-3.2745	-0.0019577	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.65746	1	9941	9941		37.812	0.65241	1	6282800			24720	14897	16653	16663	28338	28338					0.11287116262769814
KVLPIPVLSDN	11	Unmodified	_KVLPIPVLSDN_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD;nc|ENSG00000127838|Q8N490-4|PNKD;ENSG00000127838|ENST00000273077|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8561401367188	2	597.858264	1193.70197	-0.4308	-0.00025756	-2.9714	-0.0017765	-3.4022	-0.002034	597.8562580242035	92.27	2.7665	92.315	90.514	93.28	0.045448					217	66	5	0	0	0	0.65746	1	9559	9559		37.812	4.9991	1	1998300			24721	14897	16653	16663	28339	28339					0.11287116262769814
KVLPIPVLSDN	11	Unmodified	_KVLPIPVLSDN_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD;nc|ENSG00000127838|Q8N490-4|PNKD;ENSG00000127838|ENST00000273077|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.85595703125	2	597.858264	1193.70197	-0.43133	-0.00025788	-2.8188	-0.0016852	-3.2501	-0.0019431	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.64498	2	9869	9812;9869		39.253	8.6415	1	6857100			24722	14897	16653	16663	28340;28341	28341					0.11287116262769814
KVLPIPVLSDN	11	Unmodified	_KVLPIPVLSDN_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD;nc|ENSG00000127838|Q8N490-4|PNKD;ENSG00000127838|ENST00000273077|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.85595703125	2	597.858264	1193.70197	0.8216	0.0004912	-4.2474	-0.0025393	-3.4258	-0.0020481	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.69995	1	9255	9255		31.53	2.3598	1	2486400			24723	14897	16653	16663	28342	28342					0.11287116262769814
KVLPPLSP	8	Unmodified	_KVLPPLSP_					0	0	0		nc|ENSG00000157423|Q4G0P3-10|HYDIN;nc|ENSG00000157423|Q4G0P3-8|HYDIN;nc|ENSG00000157423|Q4G0P3-6|HYDIN;nc|ENSG00000157423|Q4G0P3-5|HYDIN;ENSG00000157423|ENST00000393567|HYDIN	nc|ENSG00000157423|Q4G0P3-10|HYDIN;ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747497558594	2	425.773471	849.53239	0.348	0.00014817	2.8727	0.0012231	3.2207	0.0013713	425.77466249920843	37.645	1.0176	37.958	37.411	38.429	0.31312					95	25	5	0	0	0	0.80706	1	3013	3013		19.36	3.7238	1	45114000			24724	5428;15022	16654	16664	28343	28343					0.10160464770854105
KVLPPLSP	8	Unmodified	_KVLPPLSP_					0	0	0		nc|ENSG00000157423|Q4G0P3-10|HYDIN;nc|ENSG00000157423|Q4G0P3-8|HYDIN;nc|ENSG00000157423|Q4G0P3-6|HYDIN;nc|ENSG00000157423|Q4G0P3-5|HYDIN;ENSG00000157423|ENST00000393567|HYDIN	nc|ENSG00000157423|Q4G0P3-10|HYDIN;ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7745666503906	2	425.773471	849.53239	0.52804	0.00022483	2.6288	0.0011193	3.1568	0.0013441	425.7745403369288	37.544	1.064	38.03	37.492	38.556	0.48581					97	26	5	0	0	0	0.86288	1	3011	3011		26.796	5.0938	1	42348000			24725	5428;15022	16654	16664	28344	28344					0.10160464770854105
KVLPRRINLT	10	Unmodified	_KVLPRRINLT_					0	0	0			REV__nc|ENSG00000143164|Q58WW2|DCAF6	REV__nc|ENSG00000143164|Q58WW2|DCAF6	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.93035888671875	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.733	1	47.645	47.145	48.145	-0.087646								0	0	0	0.45132	1	3590	3590		13.508	6.4893	1		+		24726	19778	16655	16665	28345	28345					0.17569039722025082
KVLPSPTT	8	Unmodified	_KVLPSPTT_					0	0	0		ENST00000540180.5_1_12:498538-521038:+|nuORF;ENST00000422000.5_1_12:498583-521038:+|nuORF	ENST00000540180.5_1_12:498538-521038:+|nuORF	ENST00000540180.5_1_12:498538-521038:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.75152587890625	2	421.752736	841.490919	-1.7782	-0.00074997	0.91991	0.00038797	-0.85831	-0.000362	421.75218958440666	77.386	3.85	77.511	77.102	80.952	0.12485					260	132	4	0	0	0	0.80706	1	7279	7279		19.36	1.995	1	434130			24727	11475	16656	16666	28346	28346					0.06383284011508294
KVLSKVCI	8	Carbamidomethyl (C)	_KVLSKVC(Carbamidomethyl (C))I_	KVLSKVC(1)I		KVLSKVC(46)I		0	1	0			REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.7932434082031	2	473.791338	945.568123	-0.18199	-8.6227E-05	4.3971	0.0020833	4.2151	0.0019971	473.79325426330604	88.888	1.49	88.938	88.433	89.923	0.050407					84	34	4	0	0	0	0.91977	1	9159	9159		45.952	7.1458	1	503710	+		24728	16960	16657	16667	28347	28347	226				0.09316178956203203
KVLSQIHS	8	Unmodified	_KVLSQIHS_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.2677307128906	2	456.269084	910.523616	1.0852	0.00049514	-0.94589	-0.00043158	0.1393	6.3559E-05	456.26850794128734	27.802	1.27	27.547	27.196	28.466	-0.25465					68	30	3	0	0	0	0.93293	1	1686	1686		51.335	5.3835	1	382970	+		24729	18793	16658	16668	28348	28348					0.06477491134376123
KVLTGLGYNV	10	Unmodified	_KVLTGLGYNV_					0	0	0			REV__nc|ENSG00000188833|Q5MY95-2|ENTPD8	REV__nc|ENSG00000188833|Q5MY95-2|ENTPD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.3110961914062	2	532.310949	1062.60735	0.76901	0.00040935	-0.63476	-0.00033789	0.13426	7.1466E-05	532.3104006831984	33.304	0.75595	33.474	33.187	33.943	0.16971					39	17	4	0	0	0	0.63899	1	2404	2404		47.96	0	1	903260	+		24730	23036	16659	16669	28349	28349					0.07854602511406483
KVLTLLPE	8	Unmodified	_KVLTLLPE_					0	0	0			REV__nc|ENSG00000175166|Q13200-2|PSMD2	REV__nc|ENSG00000175166|Q13200-2|PSMD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7933654785156	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.87479	1	4127	4127		30.504	6.3009	1	186860	+		24731	22044	16660	16670	28350	28350					0.10984716596749422
KVLTSTKG	8	Unmodified	_KVLTSTKG_					0	0	0			REV__ENSG00000134452|ENST00000362091|FBH1	REV__ENSG00000134452|ENST00000362091|FBH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.257568359375	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.7961	1	596	596		17.365	2.5001	1	867930	+		24732	19143	16661	16671	28351	28351					0.07886686385802477
KVLVSKDLH	9	Unmodified	_KVLVSKDLH_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8212280273438	2	519.818941	1037.62333	0.066288	3.4458E-05	-1.3041	-0.00067792	-1.2379	-0.00064346	519.8181781419161	84.428	1.8402	84.864	83.581	85.421	0.43538					115	44	4	0	0	0	0.19953	1	9848	9848		73.975	15.193	1	6841200			24733	5201	16662	16672	28352	28352					0.10602308748320866
KVLVVLHIKKN	11	Unmodified	_KVLVVLHIKKN_					0	0	0			REV__nc|ENSG00000154639|P78310-5|CXADR	REV__nc|ENSG00000154639|P78310-5|CXADR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.9598693847656	3	430.958852	1289.85473	-0.99486	-0.00042874	4.4806	0.001931	3.4857	0.0015022	430.96067868562477	39.832	1.6893	40.395	39.119	40.809	0.56301					124	39	4	0	0	0	0.81021	1	3368	3368		9.2118	0.41249	1	1723300	+		24734	20395	16663	16673	28353	28353					0.22139356450020387
KVLVVPID	8	Unmodified	_KVLVVPID_					0	0	0		nc|ENSG00000288702|P35503-3|UGT1A3;nc|ENSG00000288702|P35503|UGT1A3	nc|ENSG00000288702|P35503-3|UGT1A3	nc|ENSG00000288702|P35503-3|UGT1A3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24090576171875	2	441.786579	881.558604	0.58891	0.00026017	2.7692	0.0012234	3.3581	0.0014836	441.7877329438299	83.662	0.26083	83.809	83.7	83.961	0.14695					6	5	2	0	0	0	0.4196	1	8113	8113		12.959	0	1	30997			24735	15336	16664	16674	28354	28354					0.11308733942325944
KVLYEISVF	9	Unmodified	_KVLYEISVF_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;nc|ENSG00000176225|Q86VV8-4|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.3190307617188	2	549.3157	1096.61685	1.2725	0.00069901	2.3031	0.0012651	3.5756	0.0019641	549.3168832768056	100.86	2.4507	100.91	100.43	102.88	0.046356					139	58	4	0	0	0	0.78536	1	10916	10916		29.15	0.89528	1	1880500			24736	7065	16665	16675	28355	28355					0.07240370796944262
KVLYEISVF	9	Unmodified	_KVLYEISVF_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;nc|ENSG00000176225|Q86VV8-4|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.317138671875	2	549.3157	1096.61685	0.23279	0.00012788	3.2403	0.00178	3.4731	0.0019078	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.7932	1	10562	10562		26.693	2.4902	1	3004300			24737	7065	16665	16675	28356	28356					0.07240370796944262
KVLYLSKYVLN	11	Unmodified	_KVLYLSKYVLN_					0	0	0		nc|ENSG00000124678|Q8WWU5-3|TCP11;nc|ENSG00000124678|Q8WWU5-2|TCP11;nc|ENSG00000124678|Q8WWU5-6|TCP11;nc|ENSG00000124678|Q8WWU5-4|TCP11;ENSG00000124678|ENST00000311875|TCP11;nc|ENSG00000124678|Q8WWU5-5|TCP11;nc|ENSG00000124678|Q8WWU5-7|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	447.27313232421875	3	447.270984	1338.79112	-0.14506	-6.4881E-05	4.4801	0.0020038	4.335	0.0019389	447.27291009171284	107.35	0.75623	107.31	106.86	107.62	-0.034401					76	17	5	0	0	0	0.73277	1	11715	11715		25.892	4.8595	1	9872200			24738	3352	16666	16676	28357	28357					0.1352795122227235
KVLYLSKYVLN	11	Unmodified	_KVLYLSKYVLN_					0	0	0		nc|ENSG00000124678|Q8WWU5-3|TCP11;nc|ENSG00000124678|Q8WWU5-2|TCP11;nc|ENSG00000124678|Q8WWU5-6|TCP11;nc|ENSG00000124678|Q8WWU5-4|TCP11;ENSG00000124678|ENST00000311875|TCP11;nc|ENSG00000124678|Q8WWU5-5|TCP11;nc|ENSG00000124678|Q8WWU5-7|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	447.2734680175781	3	447.270984	1338.79112	-0.14504	-6.4873E-05	4.0406	0.0018073	3.8956	0.0017424	447.2727193648806	107.88	0.31844	107.84	107.61	107.93	-0.042404					31	7	5	0	0	0	0.69687	1	11746	11746		32.034	14.867	1	28572000			24739	3352	16666	16676	28358	28358					0.1352795122227235
KVLYLSKYVLN	11	Unmodified	_KVLYLSKYVLN_					0	0	0		nc|ENSG00000124678|Q8WWU5-3|TCP11;nc|ENSG00000124678|Q8WWU5-2|TCP11;nc|ENSG00000124678|Q8WWU5-6|TCP11;nc|ENSG00000124678|Q8WWU5-4|TCP11;ENSG00000124678|ENST00000311875|TCP11;nc|ENSG00000124678|Q8WWU5-5|TCP11;nc|ENSG00000124678|Q8WWU5-7|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	447.27435302734375	3	447.270984	1338.79112	1.5065	0.00067383	2.9414	0.0013156	4.4479	0.0019894	447.2722212442837	107.85	0.45378	107.88	107.52	107.97	0.035622					35	10	5	0	0	0	0.72374	1	11840	11840		27.644	1.5805	1	25250000			24740	3352	16666	16676	28359	28359					0.1352795122227235
KVLYLSKYVLN	11	Unmodified	_KVLYLSKYVLN_					0	0	0		nc|ENSG00000124678|Q8WWU5-3|TCP11;nc|ENSG00000124678|Q8WWU5-2|TCP11;nc|ENSG00000124678|Q8WWU5-6|TCP11;nc|ENSG00000124678|Q8WWU5-4|TCP11;ENSG00000124678|ENST00000311875|TCP11;nc|ENSG00000124678|Q8WWU5-5|TCP11;nc|ENSG00000124678|Q8WWU5-7|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.2728576660156	3	447.270984	1338.79112	0.74994	0.00033543	3.4289	0.0015336	4.1788	0.0018691	447.27246467576646	106.88	1.1653	106.97	106.51	107.68	0.091255					134	27	6	0	0	0	0.75121	1	11458	11458		21.78	0.74819	1	19906000			24741	3352	16666	16676	28360	28360					0.1352795122227235
KVLYLSKYVLN	11	Unmodified	_KVLYLSKYVLN_					0	0	0		nc|ENSG00000124678|Q8WWU5-3|TCP11;nc|ENSG00000124678|Q8WWU5-2|TCP11;nc|ENSG00000124678|Q8WWU5-6|TCP11;nc|ENSG00000124678|Q8WWU5-4|TCP11;ENSG00000124678|ENST00000311875|TCP11;nc|ENSG00000124678|Q8WWU5-5|TCP11;nc|ENSG00000124678|Q8WWU5-7|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.2740783691406	3	447.270984	1338.79112	0.74994	0.00033542	3.3821	0.0015127	4.132	0.0018481	447.27239062607987	107.84	0.4288	107.93	107.58	108.01	0.084412					37	10	5	0	0	0	0.75779	1	11570	11570		20.315	0.28454	1	39207000			24742	3352	16666	16676	28361	28361					0.1352795122227235
KVLYLSKYVLN	11	Unmodified	_KVLYLSKYVLN_					0	0	0		nc|ENSG00000124678|Q8WWU5-3|TCP11;nc|ENSG00000124678|Q8WWU5-2|TCP11;nc|ENSG00000124678|Q8WWU5-6|TCP11;nc|ENSG00000124678|Q8WWU5-4|TCP11;ENSG00000124678|ENST00000311875|TCP11;nc|ENSG00000124678|Q8WWU5-5|TCP11;nc|ENSG00000124678|Q8WWU5-7|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	nc|ENSG00000124678|Q8WWU5-3|TCP11	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	447.270984	1338.79112	4.8646	0.0021758	-0.59421	-0.00026577	4.2704	0.00191	447.2706290076057	107.82	0.27328	107.94	107.72	107.99	0.11715	0.056729	-0.0065917	NaN	32.034	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3056100			24743	3352	16666	16676							0.1352795122227235
KVLYPSRLEK	10	Unmodified	_KVLYPSRLEK_					0	0	0			REV__ENST00000260908.11_1_17:33807188-33814853:-|nuORF	REV__ENST00000260908.11_1_17:33807188-33814853:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.5840759277344	3	411.583562	1231.72886	-0.064664	-2.6615E-05	1.4558	0.0005992	1.3912	0.00057259	411.58409479509044	21.479	1.1219	20.851	20.494	21.616	-0.62834					86	28	4	0	0	0	0.85692	1	784	784		36.318	5.7488	1	818940	+		24744	24373	16667	16677	28362	28362					0.1222622487391618
KVMAVNIV	8	Unmodified	_KVMAVNIV_					0	0	0		ENSG00000121270|ENST00000356608|ABCC11;nc|ENSG00000121270|Q96J66-2|ABCC11	ENSG00000121270|ENST00000356608|ABCC11	ENSG00000121270|ENST00000356608|ABCC11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26495361328125	2	437.264956	872.515359	2.8534	0.0012477	-1.6442	-0.00071895	1.2092	0.00052875	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.87922	1	1480	1480		31.955	2.8053	1	21873000			24745	3171	16668	16678	28363	28363					0.07400220893396181
KVMKEKILQA	10	Unmodified	_KVMKEKILQA_					0	0	0			REV__ENST00000508377.5_1_5:34839347-34845796:+|nuORF	REV__ENST00000508377.5_1_5:34839347-34845796:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	594.3643798828125	2	594.362659	1186.71076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.89	1	107.89	107.39	108.39	0								0	0	0	0.45132	1	11237	11237		11.511	0.64546	1		+		24746	27925	16669	16679	28364	28364					0.1248776662760065
KVMLKALLH	9	Unmodified	_KVMLKALLH_					0	0	0		ENST00000368331.5_1_1:155784176-155785627:-|nuORF	ENST00000368331.5_1_1:155784176-155785627:-|nuORF	ENST00000368331.5_1_1:155784176-155785627:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8086547851562	2	526.83608	1051.65761	2.4853	0.0013094	2.4764	0.0013046	4.9617	0.002614	526.8378804774626	100.69	0.16084	101.04	100.98	101.14	0.34591					5	3	2	0	0	0	0.20789	1	12234	12234		47.916	3.7988	1	38108			24747	10592	16670	16680	28365	28365					0.13384433635565074
KVMLKEIHNC	10	Unmodified	_KVMLKEIHNC_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2422180175781	3	405.550988	1213.63113	0.32065	0.00013004	0.40158	0.00016286	0.72223	0.0002929	405.55105754573395	24.83	0.46966	24.844	24.607	25.077	0.013996					42	22	4	0	0	0	0.37624	1	855	855		10.587	3.9272	1	47655			24748	2259	16671	16681	28366	28366					0.03286376681944603
KVMLKEIHNC	10	Unmodified	_KVMLKEIHNC_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	405.550988	1213.63113	0.048012	1.9471E-05	0.38668	0.00015682	0.43469	0.00017629	405.55112675240923	24.685	0.42493	24.786	24.58	25.005	0.10045	-0.040505	-0.00013369	NaN	3.6191	31	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62701			24749	2259	16671	16681							0.03286376681944603
KVMLKEIHNC	10	Unmodified	_KVMLKEIHNC_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	405.550988	1213.63113	2.3296	0.00094479	2.1727	0.00088115	4.5024	0.0018259	405.8852557762764	25.28	0.39568	24.849	24.672	25.068	-0.4311	0.023096	0.0020393	NaN	3.6191	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77228			24750	2259	16671	16681							0.03286376681944603
KVMLQPRIKS	10	Unmodified	_KVMLQPRIKS_					0	0	0			REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.5803527832031	3	400.581276	1198.722	-1.9294	-0.00077288	0.34825	0.0001395	-1.5811	-0.00063337	400.5812185024314	112.11	1.0204	112.09	111.8	112.82	-0.019882					97	31	4	0	0	0	0.86014	1	12013	12013		23.378	4.8469	1	9176900	+		24751	21050	16672	16682	28367	28367					0.13058588721719389
KVMLRRYS	8	Unmodified	_KVMLRRYS_					0	0	0			REV__ENSG00000066279|ENST00000367409|ASPM	REV__ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.307373046875	2	526.805311	1051.59607	1.2418	0.00065418	3.7579	0.0019797	4.9996	0.0026338	526.8072201508533	100.99	2.1143	101.03	100.03	102.14	0.046349					121	49	4	0	0	0	0.9283	1	10921	10921		49.442	1.5259	1	2474600	+		24752	16520	16673	16683	28368	28368					0.07233501936298126
KVMLRRYS	8	Unmodified	_KVMLRRYS_					0	0	0			REV__ENSG00000066279|ENST00000367409|ASPM	REV__ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8080444335938	2	526.805311	1051.59607	2.1591	0.0011374	1.94	0.001022	4.0991	0.0021594	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.60357	1	12220	12220		71.296	8.3173	1	36320000	+		24753	16520	16673	16683	28369	28369					0.07233501936298126
KVMVFKKLAM	10	Unmodified	_KVMVFKKLAM_					0	0	0			REV__nc|ENSG00000131238|P50897-2|PPT1	REV__nc|ENSG00000131238|P50897-2|PPT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.85595703125	2	597.858698	1193.70284	-0.56163	-0.00033577	-3.4391	-0.0020561	-4.0007	-0.0023919	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.86718	1	9785	9785		27.882	2.3082	1	6282800	+		24754	18941	16674	16684	28370	28370					0.113739161064359
KVNEILNRL	9	Unmodified	_KVNEILNRL_					0	0	0		ENSG00000147419|ENST00000356537|CCDC25;ENST00000523841.5_1_8:27593707-27605781:-|nuORF;ENST00000519299.1_1_8:27605547-27606050:-|nuORF;ENST00000521220.1_1_8:27593735-27605871:-|nuORF;nc|ENSG00000147419|Q86WR0-2|CCDC25	ENSG00000147419|ENST00000356537|CCDC25	ENSG00000147419|ENST00000356537|CCDC25	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.8062744140625	2	549.835123	1097.65569	-1.6923	-0.00093047	1.7013	0.00093545	0.009065	4.9843E-06	549.835906937727	29.814	0.69915	29.843	29.575	30.274	0.028618					23	15	2	0	0	0	0.20789	1	1891	1891		44.117	27.644	1	94176			24755	4901	16675	16685	28371	28371					0.1107709615132535
KVNEVVFSPGE	11	Unmodified	_KVNEVVFSPGE_					0	0	0		ENSG00000161996|ENST00000293879|WDR90;ENST00000549024.5_1_16:711101-717586:+|nuORF	ENSG00000161996|ENST00000293879|WDR90	ENSG00000161996|ENST00000293879|WDR90	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	402.21240234375	3	402.211794	1203.61355	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.918	1	66.918	66.418	67.418	0								0	0	0	0.56276	1	5906	5906		27.644	1.5805	1				24756	5661	16676	16686	28372	28372					0.019890759522922963
KVNIIFKNMA	10	Unmodified	_KVNIIFKNMA_					0	0	0		CON__ENSEMBL:ENSBTAP00000031900	CON__ENSEMBL:ENSBTAP00000031900	CON__ENSEMBL:ENSBTAP00000031900	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3424072265625	2	589.341726	1176.6689	0.80964	0.00047716	0.92916	0.00054759	1.7388	0.0010247	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.86718	1	9395	9395		27.882	3.3631	1	6634500		+	24757	570	16677	16687	28373	28373					0.08763210939059718
KVNIIPLIAK	10	Unmodified	_KVNIIPLIAK_					0	0	0		ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7;ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000398921.6_1_7:45788229-45798731:-|nuORF;ENSG00000154997|ENST00000388975|SEPTIN14	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.8758544921875	2	554.876259	1107.73797	0.24568	0.00013632	-0.33608	-0.00018648	-0.090404	-5.0163E-05	554.8759765090551	53.92	0.7122	54.334	53.994	54.706	0.4139					26	16	2	0	0	0	0.54701	1	5462	5462		52.937	0	1	574300			24758	3230	16678	16688	28374	28374					0.1884061823027423
KVNIIPLIAK	10	Unmodified	_KVNIIPLIAK_					0	0	0		ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7;ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000398921.6_1_7:45788229-45798731:-|nuORF;ENSG00000154997|ENST00000388975|SEPTIN14	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.87646484375	2	554.876259	1107.73797	-0.39963	-0.00022175	0.43239	0.00023992	0.032756	1.8176E-05	554.8762058522698	53.649	0.83599	54.234	53.872	54.708	0.58474					39	19	3	0	0	0	0.70553	1	5470	5470		44.377	0	1	489110			24759	3230	16678	16688	28375	28375					0.1884061823027423
KVNIIPLIAK	10	Unmodified	_KVNIIPLIAK_					0	0	0		ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7;ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000398921.6_1_7:45788229-45798731:-|nuORF;ENSG00000154997|ENST00000388975|SEPTIN14	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7904663085938	2	554.876259	1107.73797	0.40466	0.00022453	-0.14056	-7.7991E-05	0.2641	0.00014654	554.875898399798	51.737	0.57507	52.405	52.021	52.596	0.6673					31	13	3	0	0	0	0.37624	1	5175	5175		60.118	0	1	750270			24760	3230	16678	16688	28376	28376					0.1884061823027423
KVNKKVKKS	9	Unmodified	_KVNKKVKKS_					0	0	0			REV__ENSG00000183035|ENST00000329312|CYLC1	REV__ENSG00000183035|ENST00000329312|CYLC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.8544311523438	2	529.855858	1057.69716	1.0715	0.00056776	-0.88332	-0.00046803	0.18822	9.9731E-05	529.855235184765	16.699	0.22857	16.212	16.098	16.326	-0.48718					7	4	2	0	0	0	0.78536	1	170	170		29.15	3.6994	1	32095	+		24761	22571	16679	16689	28377	28377					0.17062276910655783
KVNKKVKKS	9	Unmodified	_KVNKKVKKS_					0	0	0			REV__ENSG00000183035|ENST00000329312|CYLC1	REV__ENSG00000183035|ENST00000329312|CYLC1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	529.855858	1057.69716	1.0715	0.00056776	-0.88332	-0.00046803	0.18822	9.9731E-05	529.855235184765	16.699	0.22857	16.212	16.098	16.326	-0.48718	0.046988	-0.00032365	NaN	29.15	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32095	+		24762	22571	16679	16689							0.17062276910655783
KVNKKVKKS	9	Unmodified	_KVNKKVKKS_					0	0	0			REV__ENSG00000183035|ENST00000329312|CYLC1	REV__ENSG00000183035|ENST00000329312|CYLC1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	529.855858	1057.69716	0.39714	0.00021043	-0.32931	-0.00017449	0.067833	3.5942E-05	529.8554119641061	16.729	0.25512	16.118	15.958	16.213	-0.6107	-0.046988	0.00026343	NaN	29.15	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76257	+		24763	22571	16679	16689							0.17062276910655783
KVNKLEILLHH	11	Unmodified	_KVNKLEILLHH_					0	0	0			REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.9427185058594	3	448.610111	1342.8085	-1.5058	-0.00067553	-0.052156	-2.3398E-05	-1.558	-0.00069893	448.60991279607794	80.141	1.0395	80.246	79.789	80.828	0.10527					80	33	3	0	0	0	0.76251	1	7598	7598		19.263	6.3052	1	197830	+		24764	16706	16680	16690	28378	28378					0.15081291547926412
KVNLLGPRD	9	Unmodified	_KVNLLGPRD_					0	0	0			REV__ENSG00000132170|ENST00000651735|PPARG	REV__ENSG00000132170|ENST00000651735|PPARG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3006896972656	2	506.300916	1010.58728	2.2899	0.0011594	-2.1661	-0.0010967	0.12389	6.2724E-05	506.2997439327226	96.465	1.166	96.408	95.894	97.06	-0.056389					72	26	3	0	0	0	0.78983	1	10328	10328		27.882	1.0861	1	446160	+		24765	18986	16681	16691	28379	28379					0.0824085157147465
KVNQPASFAVS	11	Unmodified	_KVNQPASFAVS_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153578959-153579424:-|nuORF	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.29150390625	2	574.308938	1146.60332	-1.4588	-0.00083781	3.0502	0.0017518	1.5914	0.00091394	574.8129890806467	58.307	0.41628	58.699	58.566	58.983	0.39209					11	9	2	0	0	0	0.17376	1	6124	6124		32.751	2.2469	1	217550			24766	8114	16682	16692	28380	28380					0.03588513017712103
KVNSTLTL	8	Unmodified	_KVNSTLTL_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2654113769531	2	438.263468	874.512382	-2.1098	-0.00092465	1.7943	0.00078638	-0.31549	-0.00013827	438.2637559559888	24.357	0.10705	24.357	24.294	24.401	0					5	3	2	0	0	0	0.4196	1	828	828		23.042	3.0457	1	14993			24767	4956	16683	16693	28381	28381					0.07010669040232642
KVNSTLTL	8	Unmodified	_KVNSTLTL_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26300048828125	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.82658	1	2674	2674		21.96	2.5999	1	3673500			24768	4956	16683	16693	28382	28382					0.07010669040232642
KVNSTLTL	8	Unmodified	_KVNSTLTL_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633361816406	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.82658	1	3480	3480		21.96	2.5999	1	4268300			24769	4956	16683	16693	28383	28383					0.07010669040232642
KVNSVRPN	8	Unmodified	_KVNSVRPN_					0	0	0			REV__ENSG00000104738|ENST00000649973|MCM4	REV__ENSG00000104738|ENST00000649973|MCM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26373291015625	2	457.264333	912.514114	-0.13162	-6.0186E-05	0.19173	8.7669E-05	0.060104	2.7483E-05	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.86677	1	7773	7773		27.882	1.0861	1	1194000	+		24770	17469	16684	16694	28384	28384					0.05435722848858404
KVNTVTFKLLF	11	Unmodified	_KVNTVTFKLLF_					0	0	0		ENST00000358951.6_1_1:220321974-220322112:-|nuORF	ENST00000358951.6_1_1:220321974-220322112:-|nuORF	ENST00000358951.6_1_1:220321974-220322112:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26678466796875	3	437.267463	1308.78056	0.31383	0.00013723	0.49785	0.00021769	0.81168	0.00035492	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.77205	1	4475	4475		17.167	0.44936	1	2521600			24771	10420	16685	16695	28385	28385					0.1385196856786024
KVPDDPEH	8	Unmodified	_KVPDDPEH_					0	0	0		nc|ENSG00000165475|Q9Y2S2-2|CRYL1;ENSG00000165475|ENST00000298248|CRYL1	nc|ENSG00000165475|Q9Y2S2-2|CRYL1	nc|ENSG00000165475|Q9Y2S2-2|CRYL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7231140136719	2	468.724707	935.43486	-0.27946	-0.00013099	-2.7593	-0.0012934	-3.0388	-0.0014244	468.7234027551395	85.666	1.1864	86.109	85.545	86.731	0.44331					75	28	4	0	0	0	0.87922	1	10035	10035		31.955	1.4512	1	844910			24772	6084	16686	16696	28386	28386					-0.03543968895951366
KVPEMKLPKVP	11	Unmodified	_KVPEMKLPKVP_					0	0	0		nc|ENSG00000105227|Q9BXM0-3|PRX;ENST00000291825.11_2_19:40899875-40904000:-|nuORF;ENSG00000105227|ENST00000324001|PRX	nc|ENSG00000105227|Q9BXM0-3|PRX	nc|ENSG00000105227|Q9BXM0-3|PRX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5924987792969	3	422.593181	1264.75771	2.1003	0.00088759	-3.2922	-0.0013913	-1.1919	-0.00050367	422.59169327867005	49.208	2.7795	49.208	47.99	50.769	0.00016785					227	65	5	0	0	0	0.72374	1	4086	4086		27.644	2.5179	1	2361900			24773	2192	16687	16697	28387	28387					0.13592626178706269
KVPGPSQH	8	Unmodified	_KVPGPSQH_					0	0	0		ENST00000382073.3_1_12:8608624-8608705:+|nuORF	ENST00000382073.3_1_12:8608624-8608705:+|nuORF	ENST00000382073.3_1_12:8608624-8608705:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	425.2342834472656	2	425.232502	848.450451	-1.8154	-0.00077197	3.7641	0.0016006	1.9487	0.00082865	425.234002862531	34.365	0.76041	34.404	34.031	34.791	0.038639					63	32	3	0	0	0	0.89962	1	1733	1733		38.806	8.3025	1	190950			24774	10969	16688	16698	28388	28388					0.020163624117572
KVPGVPAAM	9	Unmodified	_KVPGVPAAM_					0	0	0			REV__nc|ENSG00000101452|Q9H5Z1-2|DHX35	REV__nc|ENSG00000101452|Q9H5Z1-2|DHX35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2528991699219	2	435.249306	868.484059	0.52341	0.00022781	4.0632	0.0017685	4.5866	0.0019963	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.77546	1	7169	7169		31.955	3.7006	1	712390	+		24775	17282	16689	16699	28389	28389					0.04455647859288092
KVPIVIDY	8	Unmodified	_KVPIVIDY_					0	0	0			REV__ENSG00000177485|ENST00000557385|ZBTB33	REV__ENSG00000177485|ENST00000557385|ZBTB33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.7828063964844	2	473.784036	945.553519	-0.66538	-0.00031525	-2.1714	-0.0010288	-2.8368	-0.001344	473.78284544270895	18.667	0.51439	18.046	17.813	18.327	-0.62141					18	11	2	0	0	0	0.85277	1	418	418		25.45	0	1	131450	+		24776	22210	16690	16700	28390	28390					0.07856430079698384
KVPLFELD	8	Unmodified	_KVPLFELD_					0	0	0			REV__ENSG00000174776|ENST00000682715|WDR49	REV__ENSG00000174776|ENST00000682715|WDR49	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.7903137207031	2	480.773668	959.532783	0.21457	0.00010316	-3.992	-0.0019192	-3.7774	-0.0018161	480.771501983533	23.298	0.38061	22.724	22.497	22.878	-0.57415					12	8	2	0	0	0	0.4196	1	1038	1038		33.516	0	1	47461	+		24777	22012	16691	16701	28391	28391					0.05139839700041193
KVPLFTKH	8	Unmodified	_KVPLFTKH_					0	0	0			REV__ENSG00000174718|ENST00000312561|RESF1	REV__ENSG00000174718|ENST00000312561|RESF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.7176818847656	2	485.297645	968.580737	-0.72348	-0.0003511	-3.2364	-0.0015706	-3.9598	-0.0019217	485.29600580407833	97.13	1.8363	97.361	96.782	98.618	0.23103					57	42	2	0	0	0	0.4196	1	10136	10136		23.042	13.337	1	252520	+		24778	22009	16692	16702	28392	28392					0.09518958410751566
KVPLVRNR	8	Unmodified	_KVPLVRNR_					0	0	0			REV__nc|ENSG00000165288|Q6RI45-3|BRWD3	REV__nc|ENSG00000165288|Q6RI45-3|BRWD3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.31744384765625	2	491.319443	980.624333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.385	1	59.385	58.885	59.885	0								0	0	0	0.30252	1	5163	5163		19.36	1.995	1		+		24779	21172	16693	16703	28393	28393					0.1332456790788683
KVPPPVKP	8	Unmodified	_KVPPPVKP_					0	0	0		ENSG00000160007|ENST00000672722|ARHGAP35	ENSG00000160007|ENST00000672722|ARHGAP35	ENSG00000160007|ENST00000672722|ARHGAP35	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2974853515625	2	431.281463	860.548374	-0.27329	-0.00011786	1.4466	0.00062388	1.1733	0.00050601	431.28201520238247	38.231	0.55157	38.573	38.265	38.817	0.34187					21	13	2	0	0	0	0.4196	1	3137	3137		19.36	1.0356	1	146490			24780	5552	16694	16704	28394	28394					0.11252171007754441
KVPQLALQK	9	Unmodified	_KVPQLALQK_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7634887695312	2	512.829309	1023.64407	-0.09893	-5.0734E-05	0.0028504	1.4617E-06	-0.09608	-4.9273E-05	512.8290251416087	84.515	0.32445	84.951	84.82	85.144	0.43538					10	7	2	0	0	0	0.20789	1	9831	9831		44.117	12.162	1	63891			24781	7046	16695	16705	28395	28395					0.13318899127978057
KVPRPPPGF	9	Unmodified	_KVPRPPPGF_					0	0	0		ENST00000525503.5_1_11:82996729-82996891:-|nuORF	ENST00000525503.5_1_11:82996729-82996891:-|nuORF	ENST00000525503.5_1_11:82996729-82996891:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.7956237792969	2	497.795269	993.575986	-1.5169	-0.00075511	2.6411	0.0013147	1.1242	0.00055963	497.7963799927103	49.017	1.345	49.017	48.626	49.971	0					75	31	3	0	0	0	0.78058	1	3848	3848		30.504	7.4669	1	491380			24782	13239	16696	16706	28396	28396					0.0789407426799471
KVPTGIKM	8	Unmodified	_KVPTGIKM_					0	0	0			REV__nc|ENSG00000120694|Q92598-2|HSPH1	REV__nc|ENSG00000120694|Q92598-2|HSPH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2655029296875	2	437.264956	872.515359	0.51664	0.00022591	1.2835	0.00056123	1.8001	0.00078714	437.26538540238977	22.419	1.3051	22.41	21.975	23.28	-0.0088234					141	67	4	0	0	0	0.80706	1	678	678		19.36	4.6959	1	1945900	+		24783	18422	16697	16707	28397	28397					0.0740022089340755
KVPTMRVGALN	11	Unmodified	_KVPTMRVGALN_					0	0	0			REV__ENST00000481860.6_1_11:119043673-119051967:+|nuORF	REV__ENST00000481860.6_1_11:119043673-119051967:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	593.8451538085938	2	593.342258	1184.66996	-0.22642	-0.00013434	4.248	0.0025205	4.0216	0.0023862	593.3446713104415	103.73	2.3003	103.73	103.29	105.59	0					144	55	4	0	0	0	0.72106	1	10722	10722		28.081	4.5588	1	1751500	+		24784	20732	16698	16708	28398	28398					0.0850142530798621
KVPTTITL	8	Unmodified	_KVPTTITL_					0	0	0		ENST00000597150.5_1_2:97261350-97297069:-|nuORF;nc|ENSG00000114982|Q9P2N6|KANSL3;ENST00000484020.1_1_2:97261350-97267559:-|nuORF;nc|ENSG00000114982|Q9P2N6-6|KANSL3;ENST00000447759.5_3_2:97261350-97293793:-|nuORF;nc|ENSG00000114982|Q9P2N6-5|KANSL3;nc|ENSG00000114982|Q9P2N6-4|KANSL3;ENSG00000114982|ENST00000431828|KANSL3	ENST00000597150.5_1_2:97261350-97297069:-|nuORF	ENST00000597150.5_1_2:97261350-97297069:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77496337890625	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.8347	1	9248	9248		23.042	1.0826	1	13819000			24785	14347	16699	16709	28399	28399					0.09696143562666748
KVPVTKKTHNG	11	Unmodified	_KVPVTKKTHNG_					0	0	0			REV__nc|ENSG00000163531|O94856-6|NFASC	REV__nc|ENSG00000163531|O94856-6|NFASC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8584594726562	2	604.859129	1207.70371	0.35114	0.00021239	-1.3195	-0.00079808	-0.96832	-0.0005857	604.8582079417666	80.148	0.76048	80.564	80.168	80.928	0.41621					48	17	3	0	0	0	0.53461	1	9197	9197		56.434	18.622	1	896500	+		24786	29985	16700	16710	28400	28400					0.10816170071370834
KVPVTKKTHNG	11	Unmodified	_KVPVTKKTHNG_					0	0	0			REV__nc|ENSG00000163531|O94856-6|NFASC	REV__nc|ENSG00000163531|O94856-6|NFASC	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	604.859129	1207.70371	1.0152	0.00061406	-2.4167	-0.0014618	-1.4015	-0.00084771	604.8579126371842	80.289	0.59127	80.426	80.289	80.88	0.13702	-0.13785	-0.0013184	NaN	56.434	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99108	+		24787	29985	16700	16710							0.10816170071370834
KVPVTKKTHNG	11	Unmodified	_KVPVTKKTHNG_					0	0	0			REV__nc|ENSG00000163531|O94856-6|NFASC	REV__nc|ENSG00000163531|O94856-6|NFASC	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	604.859129	1207.70371	0.72088	0.00043603	-2.5778	-0.0015592	-1.8569	-0.0011232	604.8577531049127	80.41	0.69707	80.551	80.166	80.863	0.14117	-0.012674	-0.0015132	NaN	56.434	39	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64956	+		24788	29985	16700	16710							0.10816170071370834
KVPVTKKTHNG	11	Unmodified	_KVPVTKKTHNG_					0	0	0			REV__nc|ENSG00000163531|O94856-6|NFASC	REV__nc|ENSG00000163531|O94856-6|NFASC	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	604.859129	1207.70371	-1.0077	-0.00060951	-0.82205	-0.00049723	-1.8297	-0.0011067	604.8588821424695	80.542	0.68587	80.647	80.223	80.909	0.10526	0.082737	0.00061069	NaN	56.434	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85106	+		24789	29985	16700	16710							0.10816170071370834
KVPVTRIGRLA	11	Unmodified	_KVPVTRIGRLA_					0	0	0		nc|ENSG00000163050|Q8NI60-3|COQ8A;ENSG00000163050|ENST00000366777|COQ8A	nc|ENSG00000163050|Q8NI60-3|COQ8A	nc|ENSG00000163050|Q8NI60-3|COQ8A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9294738769531	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.77061	1	3851	3851		15.921	6.7089	1	2636600			24790	5760	16701	16711	28401	28401					0.1756903972204782
KVQALALEVAP	11	Unmodified	_KVQALALEVAP_					0	0	0			REV__ENSG00000169418|ENST00000368680|NPR1	REV__ENSG00000169418|ENST00000368680|NPR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.2885131835938	2	569.845156	1137.67576	0.33646	0.00019173	-1.4036	-0.00079983	-1.0671	-0.0006081	569.8440941461308	68.844	1.1618	69.228	68.569	69.731	0.38416					67	27	3	0	0	0	0.17551	1	7560	7560		30.318	3.6248	1	395650	+		24791	21579	16702	16712	28402	28402					0.11242847091284602
KVQALALEVAP	11	Unmodified	_KVQALALEVAP_					0	0	0			REV__ENSG00000169418|ENST00000368680|NPR1	REV__ENSG00000169418|ENST00000368680|NPR1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	569.845156	1137.67576	0.4319	0.00024612	-1.3243	-0.00075463	-0.89236	-0.00050851	569.8441380457228	68.763	1.1279	69.31	68.699	69.827	0.54693	0.040731	3.7015E-05	NaN	30.318	60	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	315050	+		24792	21579	16702	16712							0.11242847091284602
KVQARVQEE	9	Unmodified	_KVQARVQEE_					0	0	0		ENSG00000197446|ENST00000331105|CYP2F1	ENSG00000197446|ENST00000331105|CYP2F1	ENSG00000197446|ENST00000331105|CYP2F1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.7945556640625	2	543.798737	1085.58292	-1.3241	-0.00072002	-4.1298	-0.0022458	-5.4539	-0.0029658	543.7963351604897	28.74	0.75562	28.711	28.328	29.084	-0.029207					36	15	3	0	0	0	0.71772	1	1743	1743		39.253	0.44669	1	392250			24793	8165	16703	16713	28403	28403					0.043553423578941874
KVQECLSRYGN	11	Unmodified	_KVQECLSRYGN_					0	0	0			REV__ENST00000528903.1_1_11:59361446-59368013:-|nuORF	REV__ENST00000528903.1_1_11:59361446-59368013:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.59771728515625	3	432.883683	1295.62922	2.3962	0.0010373	1.602	0.00069347	3.9981	0.0017307	432.88442113480494	104.99	4.2057	105.03	102.91	107.11	0.039864					158	100	2	0	0	0	0.17331	1	11639	11639		18.966	0	1	134410	+		24794	28259	16704	16714	28404	28404					-0.006769608023205365
KVQGLTLHPAP	11	Unmodified	_KVQGLTLHPAP_					0	0	0		ENST00000470670.5_1_1:228270461-228285316:+|nuORF	ENST00000470670.5_1_1:228270461-228285316:+|nuORF	ENST00000470670.5_1_1:228270461-228285316:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.8390502929688	2	580.842948	1159.67134	-0.70798	-0.00041123	-3.4414	-0.0019989	-4.1494	-0.0024101	580.8407660860938	69.805	0.83526	69.876	69.594	70.43	0.071045					106	41	3	0	0	0	0.7342	1	6346	6346		25.574	1.0549	1	12587000			24795	12224	16705	16715	28405	28405					0.09789382668373037
KVQKKDPK	8	Unmodified	_KVQKKDPK_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.80657958984375	2	485.805834	969.597115	0.52569	0.00025538	-0.18801	-9.1335E-05	0.33768	0.00016405	485.8055990929444	16.377	0.18027	15.89	15.779	15.959	-0.48718					6	3	2	0	0	0	0.89043	1	128	128		35.618	0	1	41210			24796	2000	16706	16716	28406	28406					0.11110039576840336
KVQKKDPK	8	Unmodified	_KVQKKDPK_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	485.805834	969.597115	0.17341	8.4243E-05	-0.46879	-0.00022774	-0.29538	-0.0001435	485.8054531105423	16.361	0.22998	15.763	15.648	15.878	-0.59873	-0.063747	-0.00013177	NaN	35.618	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26199			24797	2000	16706	16716							0.11110039576840336
KVQKRSLRLP	10	Unmodified	_KVQKRSLRLP_					0	0	0		ENST00000466604.5_1_3:32001665-32001764:-|nuORF	ENST00000466604.5_1_3:32001665-32001764:-|nuORF	ENST00000466604.5_1_3:32001665-32001764:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.934326171875	3	408.934818	1223.78262	-1.9388	-0.00079284	-0.054927	-2.2462E-05	-1.9937	-0.0008153	408.93476832528296	16.248	0.87597	16.296	16.053	16.929	0.047802					86	39	4	0	0	0	0.86338	1	147	147		31.634	6.5083	1	909210			24798	12139	16707	16717	28407	28407					0.17968442096298531
KVQLKVFSAS	10	Unmodified	_KVQLKVFSAS_					0	0	0			REV__nc|ENSG00000106336|O75426-4|FBXO24	REV__nc|ENSG00000106336|O75426-4|FBXO24	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8303833007812	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.80179	1	8428	8428		39.253	7.723	1	1181400	+		24799	17607	16708	16718	28408	28408					0.10094577919812764
KVQLKVFSAS	10	Unmodified	_KVQLKVFSAS_					0	0	0			REV__nc|ENSG00000106336|O75426-4|FBXO24	REV__nc|ENSG00000106336|O75426-4|FBXO24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8297729492188	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.86272	1	8920	8920		24.519	0.31644	1	5453100	+		24800	17607	16708	16718	28409	28409					0.10094577919812764
KVQNYTVNI	9	Unmodified	_KVQNYTVNI_					0	0	0		ENSG00000101544|ENST00000262198|ADNP2	ENSG00000101544|ENST00000262198|ADNP2	ENSG00000101544|ENST00000262198|ADNP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.798095703125	2	539.798206	1077.58186	-0.55561	-0.00029991	3.4821	0.0018796	2.9265	0.0015797	539.8000768252025	26.693	0.58709	26.517	26.205	26.792	-0.17559					20	12	2	0	0	0	0.51592	1	1478	1478		51.193	6.8155	1	151800			24801	1948	16709	16719	28410	28410					0.0461712798901317
KVQQFYGF	8	Unmodified	_KVQQFYGF_					0	0	0			REV__ENST00000563240.1_1_15:34653546-34654988:-|nuORF	REV__ENST00000563240.1_1_15:34653546-34654988:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.81793212890625	2	508.763635	1015.51272	-0.67421	-0.00034301	1.8605	0.00094655	1.1863	0.00060354	508.764717450681	43.572	0.27599	44.022	43.963	44.239	0.45025					10	6	2	0	0	0	0.4196	1	3955	3955		28.254	2.8041	1	153360	+		24802	28816	16710	16720	28411	28411					0.005580887600899587
KVQQLPDHF	9	Unmodified	_KVQQLPDHF_					0	0	0		nc|ENSG00000010803|Q96GD3-6|SCMH1;nc|ENSG00000010803|Q96GD3-5|SCMH1;nc|ENSG00000010803|Q96GD3-4|SCMH1;nc|ENSG00000010803|Q96GD3-3|SCMH1;nc|ENSG00000010803|Q96GD3-2|SCMH1;nc|ENSG00000010803|Q96GD3|SCMH1;ENSG00000010803|ENST00000695335|SCMH1	nc|ENSG00000010803|Q96GD3-6|SCMH1	nc|ENSG00000010803|Q96GD3-6|SCMH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	556.297607421875	2	556.298373	1110.58219	0.27636	0.00015374	-0.378	-0.00021028	-0.10164	-5.654E-05	556.2978932187805	68.74	0.54688	68.875	68.563	69.11	0.13522					37	22	2	0	0	0	0.62081	1	6199	6199		45.952	3.0877	1	99761			24803	772	16711	16721	28412	28412					0.031325477088330445
KVQVLYGLGS	10	Unmodified	_KVQVLYGLGS_					0	0	0			REV__ENST00000479501.5_1_20:61926459-61943880:+|nuORF	REV__ENST00000479501.5_1_20:61926459-61943880:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.310546875	2	532.310949	1062.60735	0.90081	0.00047951	-0.87599	-0.0004663	0.02482	1.3212E-05	532.3103345582842	33.298	0.7547	33.51	33.228	33.983	0.21168					39	17	3	0	0	0	0.4892	1	2427	2427		56.721	3.7844	1	910200	+		24804	17253	16712	16722	28413	28413					0.07854602511406483
KVQWFQQQTLQ	11	Unmodified	_KVQWFQQQTLQ_					0	0	0		ENST00000586616.5_1_19:1483766-1490130:-|nuORF;ENST00000441747.6_1_19:1482426-1490130:-|nuORF;ENST00000588195.5_1_19:1483001-1490375:-|nuORF;ENSG00000115257|ENST00000300954|PCSK4	ENST00000586616.5_1_19:1483766-1490130:-|nuORF	ENST00000586616.5_1_19:1483766-1490130:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.58770751953125	3	478.589376	1432.7463	-0.82422	-0.00039446	-3.6555	-0.0017495	-4.4797	-0.002144	478.5878634148912	48.525	1.45	49.429	48.963	50.413	0.90424					125	35	5	0	0	0	0.40952	1	4669	4669		58.63	13.99	1	21529000			24805	2825	16713	16723	28414	28414					0.04723520408924742
KVRADDTM	8	Oxidation (M)	_KVRADDTM(Oxidation (M))_		KVRADDTM(1)		KVRADDTM(68)	0	0	1		ENST00000572976.5_1_17:79870294-79872532:-|nuORF	ENST00000572976.5_1_17:79870294-79872532:-|nuORF	ENST00000572976.5_1_17:79870294-79872532:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.73077392578125	2	476.231842	950.44913	0.55317	0.00026344	-3.8035	-0.0018114	-3.2504	-0.0015479	476.22993026029525	24.888	0.52721	24.902	24.645	25.172	0.013996					44	25	2	0	0	0	0.67263	1	877	877		68.485	7.5128	1	121280			24806	14014	16714	16724	28415	28415		206			-0.028076397393078878
KVRADDTM	8	Oxidation (M)	_KVRADDTM(Oxidation (M))_					0	0	1		ENST00000572976.5_1_17:79870294-79872532:-|nuORF	ENST00000572976.5_1_17:79870294-79872532:-|nuORF	ENST00000572976.5_1_17:79870294-79872532:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	476.231842	950.44913	-0.98822	-0.00047062	-2.2315	-0.0010627	-3.2197	-0.0015333	476.2306460268229	25.104	0.58154	25.167	24.921	25.503	0.063122	0.19006	0.00084171	NaN	68.485	52	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136020			24807	14014	16714	16724				206			-0.028076397393078878
KVRADDTM	8	Oxidation (M)	_KVRADDTM(Oxidation (M))_					0	0	1		ENST00000572976.5_1_17:79870294-79872532:-|nuORF	ENST00000572976.5_1_17:79870294-79872532:-|nuORF	ENST00000572976.5_1_17:79870294-79872532:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	476.231842	950.44913	0.09412	4.4823E-05	-3.1841	-0.0015164	-3.09	-0.0014716	476.230244721266	24.762	0.49541	24.862	24.621	25.117	0.10045	-0.1151	-6.5612E-05	NaN	68.485	44	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134830			24808	14014	16714	16724				206			-0.028076397393078878
KVRAPWALA	9	Unmodified	_KVRAPWALA_					0	0	0		nc|ENSG00000141873|Q9BRY0-2|SLC39A3	nc|ENSG00000141873|Q9BRY0-2|SLC39A3	nc|ENSG00000141873|Q9BRY0-2|SLC39A3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.29595947265625	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.803	1	52.844	52.344	53.344	0.040592								0	0	0	0.2969	1	4281	4281		31.955	3.7006	1				24809	14966	16715	16725	28416	28416					0.0976576315931652
KVRASITINVH	11	Unmodified	_KVRASITINVH_					0	0	0			REV__ENST00000330258.3_2_X:63410065-63410188:-|nuORF	REV__ENST00000330258.3_2_X:63410065-63410188:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.26739501953125	3	413.250695	1236.73025	-0.089814	-3.7116E-05	-4.3836	-0.0018115	-4.4734	-0.0018486	413.24853923160174	51.372	0.6833	51.37	50.93	51.614	-0.0020447					20	15	2	0	0	0	0.17648	1	4359	4359		21.032	5.6948	1	47868	+		24810	25107	16716	16726	28417	28417					0.12135858962687962
KVRDLRTY	8	Unmodified	_KVRDLRTY_					0	0	0		ENSG00000141744|ENST00000269582|PNMT	ENSG00000141744|ENST00000269582|PNMT	ENSG00000141744|ENST00000269582|PNMT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3607788085938	2	525.806365	1049.59818	1.0364	0.00054493	0.057266	3.0111E-05	1.0936	0.00057504	525.804966757376	36.4	0.17139	36.682	36.595	36.767	0.28173					5	3	2	0	0	0	0.4196	1	2847	2847		35.618	0	1	15511			24811	4527	16717	16727	28418	28418					0.07536253945772842
KVRFIRQVQLR	11	Unmodified	_KVRFIRQVQLR_					0	0	0			REV__ENSG00000205978|ENST00000382554|NYNRIN	REV__ENSG00000205978|ENST00000382554|NYNRIN	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.6422424316406	3	481.640405	1441.89939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.369	1	31.481	30.981	31.981	0.11198								0	0	0	0.56276	1	1433	1433		27.644	5.0823	1		+		24812	23582	16718	16728	28419	28419					0.19611180316064747
KVRIGRGS	8	Unmodified	_KVRIGRGS_					0	0	0			REV__ENST00000486847.2_1_19:12774617-12777525:-|nuORF	REV__ENST00000486847.2_1_19:12774617-12777525:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.77532958984375	2	436.774868	871.535184	-0.35354	-0.00015442	-2.6501	-0.0011575	-3.0037	-0.0013119	436.77386062542524	26.841	0.59137	26.803	26.483	27.075	-0.038525					26	14	2	0	0	0	0.83646	1	1262	1262		12.207	2.0221	1	55158	+		24813	27560	16719	16729	28420	28420					0.09427732948381617
KVRIKAKRVK	10	Unmodified	_KVRIKAKRVK_					0	0	0			REV__ENST00000598660.1_1_19:18723732-18729158:+|nuORF	REV__ENST00000598660.1_1_19:18723732-18729158:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	409.292236328125	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.172	1	72.209	71.709	72.709	0.037148								0	0	0	0.45132	1	6861	6861		6.3209	2.238	1		+		24814	17563	16720	16730	28421	28421					0.2472131174695278
KVRIKAKRVK	10	Unmodified	_KVRIKAKRVK_					0	0	0			REV__ENST00000598660.1_1_19:18723732-18729158:+|nuORF	REV__ENST00000598660.1_1_19:18723732-18729158:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.2921142578125	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.088	1	19.618	19.118	20.118	-0.46967								0	0	0	0.45132	1	600	600		9.6461	2.9865	1		+		24815	17563	16720	16730	28422	28422					0.2472131174695278
KVRKFLKRRFG	11	Unmodified	_KVRKFLKRRFG_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9752502441406	3	478.977129	1433.90956	-1.6535	-0.00079198	-3.9029	-0.0018694	-5.5563	-0.0026614	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.7896	1	3493	3493		13.508	4.2961	1	252010	+		24816	23578	16721	16731	28423	28423					0.20995788041273045
KVRKFLKRRFG	11	Unmodified	_KVRKFLKRRFG_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3105773925781	3	478.977129	1433.90956	-1.5807	-0.00075714	-3.7922	-0.0018164	-5.373	-0.0025735	478.9752399041666	51.639	1.4994	51.639	50.814	52.314	0					68	39	2	0	0	0	0.80813	1	4153	4153		9.6461	0.43434	1	107410	+		24817	23578	16721	16731	28424	28424					0.20995788041273045
KVRKFLKRRFG	11	Unmodified	_KVRKFLKRRFG_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3096618652344	3	478.977129	1433.90956	-1.5624	-0.00074834	-3.8256	-0.0018324	-5.3879	-0.0025807	479.30961963549026	52.606	1.2577	52.606	52.057	53.314	0					69	33	3	0	0	0	0.7896	1	4387	4387		13.508	3.8618	1	125180	+		24818	23578	16721	16731	28425	28425					0.20995788041273045
KVRKFLKRRFG	11	Unmodified	_KVRKFLKRRFG_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9754638671875	3	478.977129	1433.90956	-1.3068	-0.00062591	-4.0419	-0.001936	-5.3487	-0.0025619	478.9750986281663	49.151	3.7005	49.151	47.803	51.503	0.00016785					187	96	3	0	0	0	0.7896	1	4279	4279		13.508	1.0751	1	240410	+		24819	23578	16721	16731	28426	28426					0.20995788041273045
KVRKFLKRRFG	11	Unmodified	_KVRKFLKRRFG_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9734802246094	3	478.977129	1433.90956	-1.3988	-0.00066997	-4.1053	-0.0019664	-5.5041	-0.0026363	478.9750520037149	52.203	1.7713	52.215	51.267	53.038	0.012436					94	42	3	0	0	0	0.79224	3	4506	4486;4506;4613		12.957	3.3113	1	183680	+		24820	23578	16721	16731	28427;28428;28429	28428					0.20995788041273045
KVRKFLKRRFG	11	Unmodified	_KVRKFLKRRFG_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9740295410156	3	478.977129	1433.90956	-0.89818	-0.00043021	-4.2455	-0.0020335	-5.1436	-0.0024637	478.9750533889841	51.817	1.8474	51.852	50.982	52.829	0.034588					134	56	3	0	0	0	0.7896	1	4054	4054		13.508	3.404	1	276750	+		24821	23578	16721	16731	28430	28430					0.20995788041273045
KVRKFLKRRFG	11	Unmodified	_KVRKFLKRRFG_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.3211364746094	3	478.977129	1433.90956	-0.32639	-0.00015633	-4.4886	-0.0021499	-4.815	-0.0023063	478.97494309861463	58.705	1.0781	59.098	58.814	59.892	0.39209					37	25	2	0	0	0	0.17911	1	6245	6245		18.531	9.7317	1	205690	+		24822	23578	16721	16731	28431	28431					0.20995788041273045
KVRKPGIAMK	10	Unmodified	_KVRKPGIAMK_					0	0	0		ENSG00000115841|ENST00000354545|RMDN2	ENSG00000115841|ENST00000354545|RMDN2	ENSG00000115841|ENST00000354545|RMDN2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	564.3573608398438	2	564.357711	1126.70087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.142	1	23.092	22.592	23.592	-0.050077								0	0	0	0.45132	1	749	749		15.642	0.77694	1				24823	2875	16722	16732	28432	28432					0.14258623412843008
KVRKQKFIS	9	Unmodified	_KVRKQKFIS_					0	0	0			REV__nc|ENSG00000115155|Q9HC10-5|OTOF	REV__nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3634643554688	2	567.361308	1132.70806	0.15466	8.7749E-05	3.9039	0.0022149	4.0585	0.0023027	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.74721	1	3145	3145		37.159	5.2042	1	1937600	+		24824	18089	16723	16733	28433	28433					0.14701679284939928
KVRLAVLSPV	10	Unmodified	_KVRLAVLSPV_					0	0	0			REV__ENST00000538842.1_1_11:72527798-72531202:+|nuORF	REV__ENST00000538842.1_1_11:72527798-72531202:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.3590698242188	2	541.358234	1080.70191	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.49	1	117.4	116.9	117.9	-0.087624								0	0	0	0.45132	1	12645	12645		16.473	0.83134	1		+		24825	21449	16724	16734	28434	28434					0.1647916105339391
KVRLQRLAR	9	Unmodified	_KVRLQRLAR_					0	0	0		ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1	ENSG00000168827|ENST00000486715|GFM1	ENSG00000168827|ENST00000486715|GFM1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.379150390625	2	570.377823	1138.74109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.539	1	15.515	15.015	16.015	-0.024207								0	0	0	0.31828	1	46	46		24.203	4.206	1				24826	6443	16725	16735	28435	28435					0.1772730612765372
KVRNGLVLPR	10	Unmodified	_KVRNGLVLPR_					0	0	0		ENST00000381246.6_1_15:44119194-44120163:+|nuORF	ENST00000381246.6_1_15:44119194-44120163:+|nuORF	ENST00000381246.6_1_15:44119194-44120163:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	576.3693237304688	2	576.372207	1150.72986	-1.0129	-0.00058382	-4.0525	-0.0023357	-5.0654	-0.0029195	576.3696920103074	39.568	1.8943	39.522	38.692	40.586	-0.046341					125	44	4	0	0	0	0.8608	1	2830	2830		34.173	6.2903	1	471610			24827	10949	16726	16736	28436	28436					0.16052484033502878
KVRPPHIP	8	Unmodified	_KVRPPHIP_					0	0	0			REV__ENST00000513342.5_1_17:46990150-47004493:+|nuORF	REV__ENST00000513342.5_1_17:46990150-47004493:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2936096191406	2	472.295436	942.57632	-1.0843	-0.0005121	-1.8076	-0.00085372	-2.8919	-0.0013658	472.2944715066274	32.662	0.50096	32.66	32.446	32.947	-0.0016365					18	11	2	0	0	0	0.86791	1	1873	1873		28.254	5.2118	1	54500	+		24828	20645	16727	16737	28437	28437					0.1027349398784736
KVRPTKKKLMD	11	Unmodified	_KVRPTKKKLMD_					0	0	0			REV__nc|ENSG00000257591|Q96I27|ZNF625	REV__nc|ENSG00000257591|Q96I27|ZNF625	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.6095275878906	3	448.611235	1342.81188	-1.3124	-0.00058875	-2.8814	-0.0012926	-4.1937	-0.0018814	448.6097327049683	74.956	1.1468	75.082	74.623	75.77	0.12545					89	30	4	0	0	0	0.77803	1	6930	6930		15.921	2.4127	1	427440	+		24829	23921	16728	16738	28438	28438					0.15418218330273703
KVRPWNVL	8	Unmodified	_KVRPWNVL_					0	0	0		ENST00000467108.1_1_18:74700562-74728973:-|nuORF	ENST00000467108.1_1_18:74700562-74728973:-|nuORF	ENST00000467108.1_1_18:74700562-74728973:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3088684082031	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.315	1	43.315	42.815	43.815	0								0	0	0	0.29344	1	3064	3064		31.955	0	1				24830	12146	16729	16739	28439	28439					0.09765763159327889
KVRQRAQIQP	10	Unmodified	_KVRQRAQIQP_					0	0	0		nc|ENSG00000205176|Q8IX06|REXO1L1P	nc|ENSG00000205176|Q8IX06|REXO1L1P	nc|ENSG00000205176|Q8IX06|REXO1L1P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.58380126953125	3	408.582556	1222.72584	2.2344	0.00091292	1.4524	0.00059343	3.6868	0.0015064	408.5830630400909	25.152	1.0818	24.721	24.272	25.354	-0.4311					47	24	3	0	0	0	0.86225	1	1287	1287		32.751	3.1998	1	326890			24831	15217	16730	16740	28440	28440					0.12338394539779074
KVRRASLKPP	10	Unmodified	_KVRRASLKPP_					0	0	0		nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.130126953125	2	576.372207	1150.72986	-1.1404	-0.0006573	-4.0901	-0.0023574	-5.2305	-0.0030147	576.3696289976715	46.581	1.8684	46.581	45.589	47.458	0					106	52	3	0	0	0	0.37624	1	3594	3594		18.262	5.3029	1	222150			24832	15149	16731	16741	28441	28441					0.16052484033502878
KVRRASLKPP	10	Unmodified	_KVRRASLKPP_					0	0	0		nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	576.372207	1150.72986	-0.098227	-5.6615E-05	-5.3265	-0.0030701	-5.4248	-0.0031267	576.3689905656255	46.857	2.0467	46.853	45.534	47.58	-0.0041618	0.28435	-0.00034189	NaN	18.262	111	51	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153790			24833	15149	16731	16741							0.16052484033502878
KVRRASLKPP	10	Unmodified	_KVRRASLKPP_					0	0	0		nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	576.372207	1150.72986	-1.3805	-0.00079568	-4.1824	-0.0024106	-5.5629	-0.0032063	576.3697443946777	45.934	0.68359	46.405	46.132	46.815	0.47139	-0.16389	0.00097696	NaN	18.262	29	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	316940			24834	15149	16731	16741							0.16052484033502878
KVRRASLKPP	10	Unmodified	_KVRRASLKPP_					0	0	0		nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	576.372207	1150.72986	-1.0973	-0.00063246	-4.2232	-0.0024341	-5.3205	-0.0030666	576.3696023048169	45.761	1.2001	46.656	45.883	47.083	0.89542	0.08715	0.00093002	NaN	18.262	51	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	286910			24835	15149	16731	16741							0.16052484033502878
KVRREFLRKLH	11	Unmodified	_KVRREFLRKLH_					0	0	0			REV__ENSG00000197748|ENST00000357060|CFAP43	REV__ENSG00000197748|ENST00000357060|CFAP43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.6457214355469	3	494.644038	1480.91028	0.75342	0.00037267	4.1321	0.0020439	4.8855	0.0024166	494.64592146049307	18.012	0.68905	17.988	17.778	18.467	-0.024035					89	32	4	0	0	0	0.79716	1	282	282		11.932	3.1331	1	750670	+		24836	23265	16732	16742	28442	28442					0.18906582690328833
KVRRIKLGYT	10	Unmodified	_KVRRIKLGYT_					0	0	0		ENSG00000064835|ENST00000350375|POU1F1;nc|ENSG00000064835|P28069-2|POU1F1	ENSG00000064835|ENST00000350375|POU1F1	ENSG00000064835|ENST00000350375|POU1F1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	618.3258056640625	2	617.393139	1232.77173	2.3304	0.0014388	2.9602	0.0018276	5.2907	0.0032664	617.3948677981243	107.75	0.14018	107.85	107.76	107.9	0.10396					6	3	2	0	0	0	0.37624	1	13141	13141		25.574	1.0549	1	569750			24837	1112	16733	16743	28443	28443					0.16465039722015717
KVRRKPEL	8	Unmodified	_KVRRKPEL_					0	0	0		ENSG00000171954|ENST00000269703|CYP4F22	ENSG00000171954|ENST00000269703|CYP4F22	ENSG00000171954|ENST00000269703|CYP4F22	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.6608276367188	2	513.33255	1024.65055	0.094402	4.846E-05	3.0957	0.0015891	3.1901	0.0016376	513.3345250690433	17.065	0.26246	17.127	16.993	17.256	0.062603					14	9	2	0	0	0	0.4196	1	205	205		7.1934	0	1	45459			24838	6726	16734	16744	28444	28444					0.13920837079353987
KVRRPELLA	9	Unmodified	_KVRRPELLA_					0	0	0		nc|ENSG00000112031|Q9UGC7-4|MTRF1L;nc|ENSG00000112031|Q9UGC7-2|MTRF1L;ENSG00000112031|ENST00000367233|MTRF1L;ENST00000482526.1_1_6:153319663-153323652:-|nuORF;ENST00000504731.1_1_4:189659580-189660645:+|nuORF	nc|ENSG00000112031|Q9UGC7-4|MTRF1L	nc|ENSG00000112031|Q9UGC7-4|MTRF1L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	541.2850952148438	2	541.345658	1080.67676	0.12183	6.5953E-05	-1.6912	-0.00091552	-1.5694	-0.00084957	541.8458582584755	20.261	0.39037	20.337	20.057	20.447	0.075848					25	19	2	0	0	0	0.20789	1	463	463		21.96	0	1	86299			24839	2628	16735	16745	28445	28445					0.139651062508392
KVRSLISAHGR	11	Unmodified	_KVRSLISAHGR_					0	0	0		nc|ENSG00000118263|O75840-3|KLF7	nc|ENSG00000118263|O75840-3|KLF7	nc|ENSG00000118263|O75840-3|KLF7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.5842590332031	3	408.582556	1222.72584	2.2344	0.00091292	1.4524	0.00059343	3.6868	0.0015064	408.5830630400909	25.152	1.0818	24.721	24.272	25.354	-0.4311					47	24	3	0	0	0	0.71803	1	1264	1264		28.577	4.0575	1	326890			24840	14866	16736	16746	28446	28446					0.12338394539779074
KVRTKKTSD	9	Unmodified	_KVRTKKTSD_					0	0	0		ENSG00000221843|ENST00000447166|C2orf16;nc|ENSG00000221843|Q68DN1|SPATA31H1	ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8168334960938	2	531.81693	1061.61931	1.0296	0.00054754	-1.136	-0.00060416	-0.10647	-5.6623E-05	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.76764	1	8779	8779		34.173	5.023	1	1241100			24841	8672	16737	16747	28447	28447					0.0909621925461579
KVRTKKTSD	9	Unmodified	_KVRTKKTSD_					0	0	0		ENSG00000221843|ENST00000447166|C2orf16;nc|ENSG00000221843|Q68DN1|SPATA31H1	ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.81689453125	2	531.81693	1061.61931	0.7269	0.00038658	-0.87822	-0.00046705	-0.15132	-8.0475E-05	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.7932	1	8863	8863		24.519	3.5723	1	4496300			24842	8672	16737	16747	28448	28448					0.0909621925461579
KVRTRKKTVPS	11	Unmodified	_KVRTRKKTVPS_					0	0	0		ENSG00000168476|ENST00000306306|REEP4	ENSG00000168476|ENST00000306306|REEP4	ENSG00000168476|ENST00000306306|REEP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801513671875	3	433.945494	1298.81465	0.51002	0.00022132	-4.2225	-0.0018323	-3.7125	-0.001611	433.94327509783005	33.942	0.78475	34.152	33.861	34.646	0.21003					30	18	2	0	0	0	0.1747	1	2503	2503		34.087	12.306	1	129750			24843	6403	16738	16748	28449	28449					0.17719809779464413
KVRVLRPAL	9	Unmodified	_KVRVLRPAL_					0	0	0		ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.361083984375	2	526.358568	1050.70258	0.76968	0.00040513	3.9857	0.0020979	4.7554	0.002503	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.78058	1	2365	2365		30.504	6.3009	1	7968500			24844	5237	16739	16749	28450	28450					0.1792600049311659
KVRVPVLG	8	Unmodified	_KVRVPVLG_					0	0	0		ENST00000551041.6_1_12:112844433-112844658:-|nuORF	ENST00000551041.6_1_12:112844433-112844658:-|nuORF	ENST00000551041.6_1_12:112844433-112844658:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.2922058105469	2	434.292362	866.570172	1.3298	0.00057754	-1.2334	-0.00053567	0.096397	4.1864E-05	434.29169449906215	74.098	0.89874	74.141	73.805	74.703	0.043648					67	35	2	0	0	0	0.81548	1	7161	7161		20.482	0	1	752660			24845	13665	16740	16750	28451	28451					0.13154975756310705
KVRYRRAAS	9	Unmodified	_KVRYRRAAS_					0	0	0		ENSG00000213533|ENST00000355083|STIMATE;ENST00000464769.1_1_3:52874512-52877125:-|nuORF	ENSG00000213533|ENST00000355083|STIMATE	ENSG00000213533|ENST00000355083|STIMATE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8300170898438	2	553.830706	1105.64686	1.198	0.00066348	-2.4064	-0.0013328	-1.2084	-0.00066928	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.78983	1	9062	9062		27.882	1.1893	1	1689700			24846	8593	16741	16751	28452	28452					0.09826167305504896
KVRYRRAAS	9	Unmodified	_KVRYRRAAS_					0	0	0		ENSG00000213533|ENST00000355083|STIMATE;ENST00000464769.1_1_3:52874512-52877125:-|nuORF	ENSG00000213533|ENST00000355083|STIMATE	ENSG00000213533|ENST00000355083|STIMATE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8299560546875	2	553.830706	1105.64686	1.287	0.00071279	-2.2482	-0.0012451	-0.96123	-0.00053236	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.7932	1	9323	9323		21.96	0	1	5348100			24847	8593	16741	16751	28453	28453					0.09826167305504896
KVSDQKLF	8	Unmodified	_KVSDQKLF_					0	0	0			REV__nc|ENSG00000144395|Q8NCX0-2|CCDC150	REV__nc|ENSG00000144395|Q8NCX0-2|CCDC150	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.77667236328125	2	482.776742	963.538931	0.72963	0.00035225	-0.77794	-0.00037557	-0.048313	-2.3324E-05	482.77618119379605	34.347	0.49415	34.651	34.406	34.901	0.30494					24	11	3	0	0	0	0.83456	1	2565	2565		60.972	9.6365	1	362800	+		24848	29906	16742	16752	28454	28454					0.05570357931571834
KVSDQKLF	8	Unmodified	_KVSDQKLF_					0	0	0			REV__nc|ENSG00000144395|Q8NCX0-2|CCDC150	REV__nc|ENSG00000144395|Q8NCX0-2|CCDC150	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	482.776742	963.538931	0.90655	0.00043766	-0.7951	-0.00038385	0.11145	5.3807E-05	482.7761500665397	34.292	0.53564	34.502	34.276	34.812	0.21003	-0.074969	-1.0219E-05	NaN	60.972	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	459390	+		24849	29906	16742	16752							0.05570357931571834
KVSDQKLF	8	Unmodified	_KVSDQKLF_					0	0	0			REV__nc|ENSG00000144395|Q8NCX0-2|CCDC150	REV__nc|ENSG00000144395|Q8NCX0-2|CCDC150	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	482.776742	963.538931	0.72963	0.00035225	-0.77794	-0.00037557	-0.048313	-2.3324E-05	482.77618119379605	34.347	0.49415	34.651	34.406	34.901	0.30494	0.074969	6.347E-06	NaN	60.972	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	362800	+		24850	29906	16742	16752							0.05570357931571834
KVSELPVPLKK	11	Unmodified	_KVSELPVPLKK_					0	0	0			REV__ENSG00000196862|ENST00000408999|RGPD4;REV__nc|ENSG00000187627|P0DJD0|RGPD1;REV__nc|ENSG00000183054|Q99666-2|RGPD5;REV__ENSG00000153201|ENST00000283195|RANBP2	REV__nc|ENSG00000187627|P0DJD0|RGPD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2680358886719	3	413.267463	1236.78056	0.21308	8.806E-05	1.6001	0.00066127	1.8132	0.00074933	413.2670936743631	41.866	2.062	41.835	40.73	42.792	-0.030991					122	53	4	0	0	0	0.74405	1	2977	2977		23.378	1.5975	1	252870	+		24851	22758;20335;16211;20336	16743	16753	28455	28455					0.1716396856782012
KVSGLLAK	8	Unmodified	_KVSGLLAK_					0	0	0			REV__ENST00000586276.5_1_17:42931463-42937758:-|nuORF	REV__ENST00000586276.5_1_17:42931463-42937758:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.271240234375	2	408.271096	814.527639	0.55277	0.00022568	-0.26667	-0.00010887	0.2861	0.00011681	408.27086164500804	29.128	0.98776	28.955	28.547	29.535	-0.17336					46	22	3	0	0	0	0.72312	1	1846	1846		66.429	8.618	1	1086600	+		24852	29102	16744	16754	28456	28456					0.11295580628075186
KVSGVHKPLIF	11	Unmodified	_KVSGVHKPLIF_					0	0	0		ENST00000562367.1_1_16:58208309-58230657:-|nuORF	ENST00000562367.1_1_16:58208309-58230657:-|nuORF	ENST00000562367.1_1_16:58208309-58230657:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.9221496582031	3	408.920286	1223.73903	2.7179	0.0011114	2.0537	0.00083978	4.7716	0.0019512	408.92110256360985	104.72	4.0561	104.68	103.08	107.14	-0.04039					239	96	4	0	0	0	0.7434	1	11478	11478		15.921	0	1	3838400			24853	13848	16745	16755	28457	28457					0.13610832599169953
KVSIRAVCVM	10	Oxidation (M)	_KVSIRAVCVM(Oxidation (M))_		KVSIRAVCVM(1)		KVSIRAVCVM(46)	0	0	1		nc|ENSG00000075043|O43526-4|KCNQ2;nc|ENSG00000075043|O43526-5|KCNQ2;nc|ENSG00000075043|O43526-3|KCNQ2;nc|ENSG00000075043|O43526-2|KCNQ2;ENSG00000075043|ENST00000359125|KCNQ2	nc|ENSG00000075043|O43526-4|KCNQ2	nc|ENSG00000075043|O43526-4|KCNQ2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3117065429688	2	561.312112	1120.60967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.32	1	58.873	58.373	59.373	0.55323								0	0	0	0.45132	1	6119	6119		45.972	6.7194	1				24854	1318	16746	16756	28458	28458		20			0.054189916532095594
KVSLGNSKTVT	11	Unmodified	_KVSLGNSKTVT_					0	0	0		ENST00000404372.1_1_6:151256177-151256594:+|nuORF	ENST00000404372.1_1_6:151256177-151256594:+|nuORF	ENST00000404372.1_1_6:151256177-151256594:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3314208984375	2	567.32987	1132.64519	2.9379	0.0016667	-2.9236	-0.0016586	0.014288	8.106E-06	567.3282419518955	118.09	1.4502	118.06	117.94	119.39	-0.024216					65	52	2	0	0	0	0.72739	1	13101	13101		27.047	2.5281	1	42635			24855	11258	16747	16757	28459	28459					0.08417068706239661
KVSLRSTPAS	10	Unmodified	_KVSLRSTPAS_					0	0	0			REV__ENSG00000180638|ENST00000433844|SLC47A2	REV__ENSG00000180638|ENST00000433844|SLC47A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035278320312	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.82886	1	8703	8703		37.812	0.65241	1	12189000	+		24856	22406	16748	16758	28460	28460					0.07224530363282611
KVSNCLNITLD	11	Carbamidomethyl (C)	_KVSNC(Carbamidomethyl (C))LNITLD_	KVSNC(1)LNITLD		KVSNC(62)LNITLD		0	1	0			REV__ENSG00000111799|ENST00000322507|COL12A1	REV__ENSG00000111799|ENST00000322507|COL12A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	638.835205078125	2	638.83192	1275.64929	1.5107	0.00096509	4.399	0.0028102	5.9097	0.0037753	638.8343540273713	74.714	0.84661	74.841	74.555	75.402	0.1271					66	22	4	0	0	0	0.37012	1	6897	6897		61.691	10.499	1	652180	+		24857	17895	16749	16759	28461	28461	234				0.022487901376052832
KVSNSTLS	8	Unmodified	_KVSNSTLS_					0	0	0		nc|ENSG00000078018|P11137-4|MAP2	nc|ENSG00000078018|P11137-4|MAP2	nc|ENSG00000078018|P11137-4|MAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.2293701171875	2	418.229625	834.444697	2.7763	0.0011611	-2.0801	-0.00086995	0.69625	0.00029119	418.2285479248724	27.365	1.3218	27.337	26.934	28.255	-0.027704					47	33	3	0	0	0	0.77771	1	1235	1235		64.207	14.766	1	65913			24858	14783	16750	16760	28462	28462					0.020852191094377304
KVSPLTPK	8	Unmodified	_KVSPLTPK_					0	0	0		nc|ENSG00000120733|Q7LBC6-2|KDM3B;ENSG00000120733|ENST00000314358|KDM3B;nc|ENSG00000120733|Q7LBC6-3|KDM3B	nc|ENSG00000120733|Q7LBC6-2|KDM3B	nc|ENSG00000120733|Q7LBC6-2|KDM3B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.1697082519531	2	435.276378	868.538203	-1.6696	-0.00072673	3.4278	0.001492	1.7582	0.00076531	435.27700864272214	19.4	0.21437	19.444	19.336	19.55	0.043747					12	10	2	0	0	0	0.4196	1	412	412		10.866	0	1	14760			24859	3150	16751	16761	28463	28463					0.09867563282512037
KVSQVIMEK	9	Unmodified	_KVSQVIMEK_					0	0	0		ENSG00000164985|ENST00000380733|PSIP1	ENSG00000164985|ENST00000380733|PSIP1	ENSG00000164985|ENST00000380733|PSIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3045654296875	2	531.30481	1060.59507	0.8712	0.00046287	-1.0658	-0.00056628	-0.19462	-0.0001034	531.3041031912084	28.489	0.57418	28.316	28.057	28.631	-0.17336					25	14	2	0	0	0	0.47797	1	1741	1741		53.089	0.15226	1	237840			24860	6035	16752	16762	28464	28464					0.06719242776716783
KVSQVVKP	8	Unmodified	_KVSQVVKP_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.228271484375	2	442.781828	883.549102	0.31866	0.0001411	-0.6029	-0.00026695	-0.28424	-0.00012586	442.78141915171375	21.462	0.62394	21.019	20.87	21.494	-0.44324					24	14	2	0	0	0	0.4196	1	780	780		15.642	12.232	1	54725	+		24861	23707	16753	16763	28465	28465					0.10266965656796856
KVSQVVKP	8	Unmodified	_KVSQVVKP_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	442.781828	883.549102	0.11997	5.312E-05	-0.039171	-1.7344E-05	0.080798	3.5776E-05	442.7816617936687	21.75	0.61199	21.122	20.887	21.499	-0.62835	0.051443	0.00022113	NaN	15.642	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90387	+		24862	23707	16753	16763							0.10266965656796856
KVSRFGIRTGT	11	Unmodified	_KVSRFGIRTGT_					0	0	0		ENST00000463333.6_1_2:86831591-86842310:-|nuORF;ENSG00000239305|ENST00000237455|RNF103	ENST00000463333.6_1_2:86831591-86842310:-|nuORF	ENST00000463333.6_1_2:86831591-86842310:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3634643554688	2	611.356754	1220.69895	0.21646	0.00013233	-0.8106	-0.00049557	-0.59414	-0.00036323	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.69248	1	10258	10258		32.751	0	1	12399000			24863	8766	16754	16764	28466	28466					0.09743285928584555
KVSRPKAQKR	10	Unmodified	_KVSRPKAQKR_					0	0	0			REV__ENSG00000102935|ENST00000563137|ZNF423	REV__ENSG00000102935|ENST00000563137|ZNF423	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.379150390625	2	599.380563	1196.74657	0.89992	0.0005394	-1.6462	-0.00098668	-0.74624	-0.00044728	599.379410135585	103.38	3.1227	103.51	103.01	106.14	0.12621					246	78	5	0	0	0	0.8545	1	11041	11041		36.447	0	1	20012000	+		24864	17373	16755	16765	28467	28467					0.15606984919440947
KVSRPKAQKR	10	Unmodified	_KVSRPKAQKR_					0	0	0			REV__ENSG00000102935|ENST00000563137|ZNF423	REV__ENSG00000102935|ENST00000563137|ZNF423	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	599.3772583007812	2	599.380563	1196.74657	2.9711	0.0017808	-2.3044	-0.0013812	0.66664	0.00039957	599.3789549503108	103.1	1.3745	103.39	103.15	104.53	0.28442					60	34	3	0	0	0	0.86218	1	12575	12575		32.812	6.1195	1	1766200	+		24865	17373	16755	16765	28468	28468					0.15606984919440947
KVTEGSFVYK	10	Unmodified	_KVTEGSFVYK_					0	0	0		ENSG00000057608|ENST00000380191|GDI2	ENSG00000057608|ENST00000380191|GDI2	ENSG00000057608|ENST00000380191|GDI2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.3154296875	2	579.313689	1156.61282	-0.43741	-0.0002534	1.0039	0.00058159	0.56652	0.0003282	579.3140541684564	35.271	0.61631	35.518	35.203	35.82	0.24769					42	15	4	0	0	0	0.062895	3	2687	2675;2687;2699		106.88	36.064	1	1593300			24866	1038	16756	16766	28469;28470;28471	28470					0.040782813032365084
KVTEGSFVYK	10	Unmodified	_KVTEGSFVYK_					0	0	0		ENSG00000057608|ENST00000380191|GDI2	ENSG00000057608|ENST00000380191|GDI2	ENSG00000057608|ENST00000380191|GDI2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	579.3157958984375	2	579.313689	1156.61282	0.59033	0.00034199	-0.12544	-7.2666E-05	0.4649	0.00026932	579.3134862146451	35.251	0.80434	35.632	35.211	36.015	0.3812					44	20	3	0	0	0	0.035866	2	2698	2698;2710		112.11	22.449	1	1886900			24867	1038	16756	16766	28472;28473	28472					0.040782813032365084
KVTHSRSHII	10	Unmodified	_KVTHSRSHII_					0	0	0			REV__ENST00000522207.1_1_8:86351138-86354561:+|nuORF	REV__ENST00000522207.1_1_8:86351138-86354561:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3428955078125	2	589.343646	1176.67274	0.83312	0.00049099	-2.1148	-0.0012464	-1.2817	-0.00075536	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.86218	1	9511	9511		32.812	0	1	20363000	+		24868	28130	16757	16767	28474	28474					0.09147016757151505
KVTKTSVA	8	Unmodified	_KVTKTSVA_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.258056640625	2	417.258185	832.501818	0.01446	6.0334E-06	0.588	0.00024535	0.60246	0.00025138	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.80514	1	578	578		19.104	0.84144	1	817900	+		24869	20437;29946	16758	16768	28475	28475					0.07886686385802477
KVTLIETEPL	10	Unmodified	_KVTLIETEPL_					0	0	0		ENSG00000196090|ENST00000373187|PTPRT;nc|ENSG00000196090|O14522-1|PTPRT	ENSG00000196090|ENST00000373187|PTPRT	ENSG00000196090|ENST00000373187|PTPRT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.2821044921875	2	571.836997	1141.65944	-0.81881	-0.00046823	0.13902	7.9494E-05	-0.6798	-0.00038873	571.8368103331842	63.233	1.4186	63.621	63.315	64.733	0.3878					41	32	2	0	0	0	0.37624	1	6892	6892		30.318	4.7437	1	234830			24870	8010	16759	16769	28476	28476					0.09427721134511557
KVTLSSSKNLK	11	Unmodified	_KVTLSSSKNLK_					0	0	0		ENSG00000099290|ENST00000282633|WASHC2A;nc|ENSG00000099290|Q641Q2-2|WASHC2A	ENSG00000099290|ENST00000282633|WASHC2A	ENSG00000099290|ENST00000282633|WASHC2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.7055358886719	3	402.246839	1203.71869	2.0673	0.00083157	-0.59638	-0.00023989	1.4709	0.00059167	402.24657362102994	25.036	0.48738	24.522	24.281	24.768	-0.51365					20	10	2	0	0	0	0.17245	1	1286	1286		4.6433	1.0243	1	98869			24871	1753	16760	16770	28477	28477					0.12497617148687823
KVTLVEAEHPE	11	Unmodified	_KVTLVEAEHPE_					0	0	0			REV__ENSG00000170927|ENST00000371117|PKHD1	REV__ENSG00000170927|ENST00000371117|PKHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.8911437988281	3	417.890832	1250.65067	0.083224	3.4779E-05	1.6397	0.00068522	1.7229	0.00071999	417.89145699630853	31.516	0.6971	31.535	31.165	31.862	0.018362					36	15	4	0	0	0	0.69071	1	1705	1705		33.039	4.4627	1	117840	+		24872	21700	16761	16771	28478	28478					0.03536747498014847
KVTLVEAEHPE	11	Unmodified	_KVTLVEAEHPE_					0	0	0			REV__ENSG00000170927|ENST00000371117|PKHD1	REV__ENSG00000170927|ENST00000371117|PKHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.8913879394531	3	417.890832	1250.65067	-0.33105	-0.00013834	1.8202	0.00076064	1.4891	0.0006223	417.8915287817386	31.639	0.86529	31.588	31.289	32.154	-0.051031					41	18	3	0	0	0	0.69071	1	1810	1810		33.039	0.28887	1	165510	+		24873	21700	16761	16771	28479	28479					0.03536747498014847
KVTLVEAEHPE	11	Unmodified	_KVTLVEAEHPE_					0	0	0			REV__ENSG00000170927|ENST00000371117|PKHD1	REV__ENSG00000170927|ENST00000371117|PKHD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	417.890832	1250.65067	0.11861	4.9566E-05	0.034841	1.456E-05	0.15345	6.4125E-05	418.22501292808204	31.396	0.15851	31.379	31.346	31.504	-0.017466	-0.13495	-0.0009916	NaN	33.039	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37098	+		24874	21700	16761	16771							0.03536747498014847
KVTNDKVK	8	Unmodified	_KVTNDKVK_					0	0	0		nc|ENSG00000148702|Q14520-2|HABP2;ENSG00000148702|ENST00000351270|HABP2	nc|ENSG00000148702|Q14520-2|HABP2	nc|ENSG00000148702|Q14520-2|HABP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.281982421875	2	466.282192	930.549831	0.04489	2.0932E-05	0.20226	9.4309E-05	0.24715	0.00011524	466.28216714928925	16.361	0.36927	15.763	15.555	15.924	-0.59873					12	7	3	0	0	0	0.81485	1	120	120		62.107	7.3311	1	217770			24875	4979	16762	16772	28480	28480					0.08177760305841275
KVTNIEGLLHK	11	Unmodified	_KVTNIEGLLHK_					0	0	0		nc|ENSG00000165240|Q04656-5|ATP7A;ENSG00000165240|ENST00000341514|ATP7A;nc|ENSG00000165240|Q04656-2|ATP7A;nc|ENSG00000165240|Q04656-3|ATP7A;nc|ENSG00000165240|Q04656-4|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.37548828125	2	626.374612	1250.73467	0.42244	0.0002646	2.8658	0.0017951	3.2883	0.0020597	626.3767951946339	44.871	0.91894	44.92	44.571	45.49	0.048996					39	21	3	0	0	0	0.68532	1	3212	3212		33.922	11.342	1	198720			24876	6063	16763	16773	28481	28481					0.11933323385619587
KVTNIEGLLHK	11	Unmodified	_KVTNIEGLLHK_					0	0	0		nc|ENSG00000165240|Q04656-5|ATP7A;ENSG00000165240|ENST00000341514|ATP7A;nc|ENSG00000165240|Q04656-2|ATP7A;nc|ENSG00000165240|Q04656-3|ATP7A;nc|ENSG00000165240|Q04656-4|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	626.374612	1250.73467	-0.90178	-0.00056485	4.4806	0.0028065	3.5788	0.0022417	626.3772009738428	44.864	0.99906	44.864	44.416	45.415	0	-0.064125	0.00089294	NaN	33.922	44	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99651			24877	6063	16763	16773							0.11933323385619587
KVTNIEGLLHK	11	Unmodified	_KVTNIEGLLHK_					0	0	0		nc|ENSG00000165240|Q04656-5|ATP7A;ENSG00000165240|ENST00000341514|ATP7A;nc|ENSG00000165240|Q04656-2|ATP7A;nc|ENSG00000165240|Q04656-3|ATP7A;nc|ENSG00000165240|Q04656-4|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	626.374612	1250.73467	0.075247	4.7133E-05	3.5046	0.0021952	3.5799	0.0022423	626.3767201489607	45.087	1.0384	45.064	44.7	45.739	-0.023079	0.13606	-0.0003297	NaN	33.922	39	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90271			24878	6063	16763	16773							0.11933323385619587
KVTNIEGLLHK	11	Unmodified	_KVTNIEGLLHK_					0	0	0		nc|ENSG00000165240|Q04656-5|ATP7A;ENSG00000165240|ENST00000341514|ATP7A;nc|ENSG00000165240|Q04656-2|ATP7A;nc|ENSG00000165240|Q04656-3|ATP7A;nc|ENSG00000165240|Q04656-4|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	626.374612	1250.73467	-0.8208	-0.00051413	4.4239	0.002771	3.6031	0.0022569	626.3773227537063	45.038	1.0486	45.007	44.489	45.538	-0.031067	0.078812	0.00082186	NaN	33.922	52	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156160			24879	6063	16763	16773							0.11933323385619587
KVTNIEGLLHK	11	Unmodified	_KVTNIEGLLHK_					0	0	0		nc|ENSG00000165240|Q04656-5|ATP7A;ENSG00000165240|ENST00000341514|ATP7A;nc|ENSG00000165240|Q04656-2|ATP7A;nc|ENSG00000165240|Q04656-3|ATP7A;nc|ENSG00000165240|Q04656-4|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	626.374612	1250.73467	-0.30255	-0.00018951	3.6646	0.0022954	3.3621	0.0021059	626.3768252633085	44.934	1.1305	44.93	44.576	45.706	-0.0041618	0.0017644	-0.00012929	NaN	33.922	49	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181350			24880	6063	16763	16773							0.11933323385619587
KVTNIEGLLHK	11	Unmodified	_KVTNIEGLLHK_					0	0	0		nc|ENSG00000165240|Q04656-5|ATP7A;ENSG00000165240|ENST00000341514|ATP7A;nc|ENSG00000165240|Q04656-2|ATP7A;nc|ENSG00000165240|Q04656-3|ATP7A;nc|ENSG00000165240|Q04656-4|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	626.374612	1250.73467	0.32625	0.00020435	3.4386	0.0021539	3.7648	0.0023582	626.3768925381618	44.859	1.2271	44.79	44.352	45.579	-0.068634	-0.13792	-0.00041243	NaN	33.922	46	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	203730			24881	6063	16763	16773							0.11933323385619587
KVTPRRYGK	9	Unmodified	_KVTPRRYGK_					0	0	0		nc|ENSG00000196172|Q96N22-2|ZNF681;ENSG00000196172|ENST00000402377|ZNF681	nc|ENSG00000196172|Q96N22-2|ZNF681	nc|ENSG00000196172|Q96N22-2|ZNF681	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8306884765625	2	552.835457	1103.65636	0.70436	0.0003894	-3.555	-0.0019653	-2.8507	-0.0015759	552.8335720406732	83.834	1.6836	83.982	83.396	85.079	0.14789					58	38	2	0	0	0	0.7932	1	8160	8160		26.693	1.1189	1	196450			24882	8022	16764	16774	28482	28482					0.10867935591022615
KVTRIKAKSI	10	Unmodified	_KVTRIKAKSI_					0	0	0			REV__ENSG00000180914|ENST00000316793|OXTR	REV__ENSG00000180914|ENST00000316793|OXTR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.2821044921875	2	572.38224	1142.74993	-0.49754	-0.00028479	3.779	0.002163	3.2814	0.0018782	572.3843885206098	64.834	1.5902	65.221	64.047	65.637	0.38615					69	37	2	0	0	0	0.37624	1	6892	6892		22.58	10.944	1	146570	+		24883	22425	16765	16775	28483	28483					0.18426234973458122
KVTRRGRRPV	10	Unmodified	_KVTRRGRRPV_					0	0	0		ENSG00000189306|ENST00000323013|RRP7A;nc|ENSG00000291035|Q9NSQ0|RRP7BP;ENST00000357802.6_1_22:42970741-42976277:-|nuORF	ENSG00000189306|ENST00000323013|RRP7A;nc|ENSG00000291035|Q9NSQ0|RRP7BP	ENSG00000189306|ENST00000323013|RRP7A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.25030517578125	3	408.930178	1223.76871	0.81834	0.00033464	2.19	0.00089557	3.0084	0.0012302	408.93080567410726	28.489	0.95832	28.316	27.801	28.76	-0.17336					45	23	3	0	0	0	0.37624	1	1682	1682		6.6596	0	1	179820			24884	8001;10395	16766	16776	28484	28484					0.1657720938787861
KVTRRRSSA	9	Unmodified	_KVTRRRSSA_					0	0	0		ENST00000427442.6_1_20:42157961-42159515:+|nuORF	ENST00000427442.6_1_20:42157961-42159515:+|nuORF	ENST00000427442.6_1_20:42157961-42159515:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8208618164062	2	530.820338	1059.62612	-0.88248	-0.00046844	2.3472	0.0012459	1.4647	0.0007775	530.821384723199	80.761	1.5978	80.761	80.141	81.738	0					159	57	4	0	0	0	0.77244	1	7423	7423		32.812	4.9302	1	2196600			24885	11574	16767	16777	28485	28485					0.09869576925848378
KVTSETKKKE	10	Unmodified	_KVTSETKKKE_					0	0	0		ENSG00000186439|ENST00000334268|TRDN	ENSG00000186439|ENST00000334268|TRDN	ENSG00000186439|ENST00000334268|TRDN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3446044921875	2	589.342978	1176.6714	0.15554	9.1664E-05	-0.12689	-7.4782E-05	0.028646	1.6882E-05	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.86471	1	11668	11668		30.318	2.2362	1	10540000			24886	7795	16768	16778	28486	28486					0.09013337877672711
KVTSQLKITAN	11	Unmodified	_KVTSQLKITAN_					0	0	0			REV__ENSG00000066279|ENST00000367409|ASPM	REV__ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.857666015625	2	601.858795	1201.70304	1.0107	0.00060827	-2.806	-0.0016888	-1.7953	-0.0010805	601.8569689467788	103.23	2.1882	103.41	103.08	105.27	0.18297					123	54	4	0	0	0	0.6493	1	10916	10916		38.754	1.2454	1	2928900	+		24887	16520	16769	16779	28487	28487					0.11025330631650831
KVTSQLKITAN	11	Unmodified	_KVTSQLKITAN_					0	0	0			REV__ENSG00000066279|ENST00000367409|ASPM	REV__ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	601.8579711914062	2	601.858795	1201.70304	0.90226	0.00054303	-2.5932	-0.0015607	-1.6909	-0.0010177	601.8571228928912	103.35	2.581	103.48	103.09	105.68	0.12622					132	64	4	0	0	0	0.68532	1	10925	10925		33.922	6.0394	1	2471100	+		24888	16520	16769	16779	28488	28488					0.11025330631650831
KVTTLLISL	9	Unmodified	_KVTTLLISL_					0	0	0			REV__ENST00000378509.8_1_7:133976258-133976573:-|nuORF	REV__ENST00000378509.8_1_7:133976258-133976573:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3273010253906	2	494.326068	986.637583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.071	1	15.12	14.62	15.62	0.04908								0	0	0	0.34348	1	7	7		16.473	0.83134	1		+		24889	25896	16770	16780	28489	28489					0.14372961176616172
KVTTVKRT	8	Unmodified	_KVTTVKRT_					0	0	0			REV__ENSG00000154710|ENST00000284957|RABGEF1	REV__ENSG00000154710|ENST00000284957|RABGEF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.7973937988281	2	466.798009	931.581465	0.042884	2.0018E-05	-0.8518	-0.00039762	-0.80892	-0.0003776	466.79743697108887	19.196	1.0272	19.122	18.891	19.918	-0.074974					77	38	3	0	0	0	0.81897	1	389	389		20.947	6.2828	1	152940	+		24890	20396	16771	16781	28490	28490					0.11293753059783285
KVTTVKRT	8	Unmodified	_KVTTVKRT_					0	0	0			REV__ENSG00000154710|ENST00000284957|RABGEF1	REV__ENSG00000154710|ENST00000284957|RABGEF1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.79742431640625	2	466.798009	931.581465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.747	1	19.118	18.618	19.618	-0.6296								0	0	0	0.30125	1	561	561		20.482	2.1574	1		+		24891	20396	16771	16781	28491	28491					0.11293753059783285
KVTTVKRT	8	Unmodified	_KVTTVKRT_					0	0	0			REV__ENSG00000154710|ENST00000284957|RABGEF1	REV__ENSG00000154710|ENST00000284957|RABGEF1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	466.798009	931.581465	0.042884	2.0018E-05	-0.8518	-0.00039762	-0.80892	-0.0003776	466.79743697108887	19.196	1.0272	19.122	18.891	19.918	-0.074974	0.16021	-0.00028513	NaN	20.947	77	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	152940	+		24892	20396	16771	16781							0.11293753059783285
KVTTVKRT	8	Unmodified	_KVTTVKRT_					0	0	0			REV__ENSG00000154710|ENST00000284957|RABGEF1	REV__ENSG00000154710|ENST00000284957|RABGEF1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	466.798009	931.581465	-1.1365	-0.00053052	0.61172	0.00028555	-0.52479	-0.00024497	466.7980880311773	18.854	0.8271	18.898	18.741	19.569	0.043749	-0.063349	0.0010812	NaN	20.947	69	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	853540	+		24893	20396	16771	16781							0.11293753059783285
KVTVGKKDRIG	11	Unmodified	_KVTVGKKDRIG_					0	0	0			REV__nc|ENSG00000114805|Q4KWH8|PLCH1	REV__nc|ENSG00000114805|Q4KWH8|PLCH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.9188232421875	3	400.918945	1199.73501	0.21122	8.4683E-05	0.13604	5.454E-05	0.34726	0.00013922	400.91894534261905	15.869	0.31759	15.27	15.148	15.465	-0.59873					22	7	4	0	0	0	0.6396	1	56	56		39.873	7.839	1	264690	+		24894	29793	16772	16782	28492	28492					0.1431274310543813
KVTYNVTSF	9	Unmodified	_KVTYNVTSF_					0	0	0		ENSG00000166866|ENST00000300119|MYO1A	ENSG00000166866|ENST00000300119|MYO1A	ENSG00000166866|ENST00000300119|MYO1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7822265625	2	529.779482	1057.54441	0.70032	0.00037101	2.5295	0.0013401	3.2298	0.0017111	529.7806785295993	51.421	0.82317	52.164	51.849	52.672	0.7429					43	19	3	0	0	0	0.71772	1	5165	5165		39.253	0.44669	1	1458900			24895	6239	16773	16783	28493	28493					0.017940367233677534
KVVAKKYRNF	10	Unmodified	_KVVAKKYRNF_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.877197265625	2	626.879865	1251.74518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.367	1	58.36	57.86	58.86	-0.0074387								0	0	0	0.45132	1	4968	4968		39.253	8.9351	1				24896	6499	16774	16784	28494	28494					0.1293735083067986
KVVALGLL	8	Unmodified	_KVVALGLL_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7853088378906	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.81548	1	1768	1768		20.482	1.1219	1	1606100			24897	8074	16775	16785	28495	28495					0.13981055150509292
KVVALGLL	8	Unmodified	_KVVALGLL_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78533935546875	2	406.783839	811.553125	-0.12701	-5.1665E-05	4.0102	0.0016313	3.8832	0.0015796	406.7853480704683	34.439	1.4356	34.434	33.818	35.254	-0.0047417					125	35	4	0	0	0	0.86791	1	2052	2052		28.254	1.4582	1	1552500			24898	8074	16775	16785	28496	28496					0.13981055150509292
KVVALGLL	8	Unmodified	_KVVALGLL_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.82464	1	1880	1880		21.702	2.3424	1	1953100			24899	8074	16775	16785	28497	28497					0.13981055150509292
KVVALGLL	8	Unmodified	_KVVALGLL_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78533935546875	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.89457	1	1758	1758		37.028	8.7742	1	1965300			24900	8074	16775	16785	28498	28498					0.13981055150509292
KVVALGLL	8	Unmodified	_KVVALGLL_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78521728515625	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.81724	1	1306	1306		14.664	0	1	1410200			24901	8074	16775	16785	28499	28499					0.13981055150509292
KVVALGLL	8	Unmodified	_KVVALGLL_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78509521484375	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.81548	2	1445	1445;1496		21.702	1.2205	1	1817700			24902	8074	16775	16785	28500;28501	28500					0.13981055150509292
KVVALGLL	8	Unmodified	_KVVALGLL_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7852478027344	2	406.783839	811.553125	0.34779	0.00014148	3.2583	0.0013254	3.6061	0.0014669	406.7850428339316	31.533	1.6322	31.64	30.856	32.488	0.10707					116	37	4	0	0	0	0.81548	1	2209	2209		20.482	0	1	5012000			24903	8074	16775	16785	28502	28502					0.13981055150509292
KVVDLPHM	8	Unmodified	_KVVDLPHM_					0	0	0			REV__nc|ENSG00000183032|Q9BQT8-2|SLC25A21	REV__nc|ENSG00000183032|Q9BQT8-2|SLC25A21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7611389160156	2	469.760038	937.505523	-1.0651	-0.00050035	4.0261	0.0018913	2.961	0.001391	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.87479	1	1862	1862		30.504	1.3541	1	219920	+		24904	22569	16776	16786	28503	28503					0.03427032888021131
KVVEKVLHLL	10	Unmodified	_KVVEKVLHLL_					0	0	0			REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3428955078125	2	589.386991	1176.75943	0.81095	0.00047796	1.07	0.00063062	1.8809	0.0011086	589.3871806354778	93.663	0.17075	93.891	93.784	93.955	0.22863					5	3	2	0	0	0	0.37624	1	9526	9526		12.812	2.5465	1	77010	+		24905	19729	16777	16787	28504	28504					0.178120032589959
KVVELKDMA	9	Unmodified	_KVVELKDMA_					0	0	0			REV__nc|ENSG00000151208|Q8TDM6-2|DLG5	REV__nc|ENSG00000151208|Q8TDM6-2|DLG5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7931518554688	2	516.791535	1031.56852	0.82179	0.0004247	2.9641	0.0015318	3.7859	0.0019565	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.67345	1	8988	8988		42.396	1.618	1	858640	+		24906	20240	16778	16788	28505	28505					0.05399553885399655
KVVELPCTL	9	Unmodified	_KVVELPCTL_					0	0	0			REV__ENST00000502756.1_1_3:140660896-140675534:+|nuORF	REV__ENST00000502756.1_1_3:140660896-140675534:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2901306152344	2	501.288628	1000.5627	-0.52378	-0.00026256	3.9973	0.0020038	3.4736	0.0017413	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.76255	1	8455	8455		35.618	5.1146	1	2929300	+		24907	18031	16779	16789	28506	28506					0.06244455373735036
KVVELPCTL	9	Unmodified	_KVVELPCTL_					0	0	0			REV__ENST00000502756.1_1_3:140660896-140675534:+|nuORF	REV__ENST00000502756.1_1_3:140660896-140675534:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2913818359375	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.76764	1	8379	8379		34.173	1.3601	1	9566900	+		24908	18031	16779	16789	28507	28507					0.06244455373735036
KVVEMFLN	8	Unmodified	_KVVEMFLN_					0	0	0		ENSG00000180182|ENST00000324817|MED14;ENST00000496531.2_1_X:40540160-40542133:-|nuORF	ENSG00000180182|ENST00000324817|MED14	ENSG00000180182|ENST00000324817|MED14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	490.2674560546875	2	490.267696	978.520839	-0.67208	-0.0003295	1.9364	0.00094935	1.2643	0.00061985	490.26866249477763	83.997	2.9917	84.163	83.319	86.311	0.1651					132	69	2	0	0	0	0.89494	1	8240	8240		37.159	5.2042	1	268130			24909	7316	16780	16790	28508	28508					0.030718996852101554
KVVEVPKL	8	Unmodified	_KVVEVPKL_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7911376953125	2	456.299853	910.585153	0.20856	9.5165E-05	2.1915	0.00099997	2.4	0.0010951	456.3006822379284	39.411	1.6419	39.499	38.918	40.56	0.088371					97	45	3	0	0	0	0.4196	1	2379	2379		15.642	3.435	1	525810	+		24910	20437;29946	16781	16791	28509	28509					0.1262842283365444
KVVFQISKN	9	Unmodified	_KVVFQISKN_					0	0	0		Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|3|3|sense	Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|3|3|sense	Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|3|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8169555664062	2	531.818941	1061.62333	-1.264	-0.00067223	-2.5284	-0.0013447	-3.7925	-0.0020169	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.77244	1	10343	10343		32.812	1.2826	1	4586300			24911	15	16782	16792	28510	28510					0.09498308748334239
KVVFVDPSF	9	Unmodified	_KVVFVDPSF_					0	0	0		ENSG00000132801|ENST00000255152|ZSWIM3	ENSG00000132801|ENST00000255152|ZSWIM3	ENSG00000132801|ENST00000255152|ZSWIM3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.81884765625	2	519.286943	1036.55933	-0.13399	-6.9577E-05	4.4228	0.0022967	4.2888	0.0022271	519.2882794895062	84.541	0.44336	84.988	84.752	85.196	0.44736					18	10	2	0	0	0	0.20789	1	9850	9850		23.042	10.836	1	117970			24912	3829	16783	16793	28511	28511					0.042515285913850676
KVVGVLVGP	9	Unmodified	_KVVGVLVGP_					0	0	0			REV__ENSG00000074276|ENST00000261944|CDHR2	REV__ENSG00000074276|ENST00000261944|CDHR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78009033203125	2	434.286746	866.558939	-1.1606	-0.00050405	2.3111	0.0010037	1.1504	0.00049962	434.28775822728323	43.748	0.92839	44.522	44.223	45.152	0.7738					38	22	2	0	0	0	0.20789	1	4046	4046		31.955	21.69	1	480860	+		24913	16688	16784	16794	28512	28512					0.12032153662175915
KVVHKSFV	8	Unmodified	_KVVHKSFV_					0	0	0		ENSG00000124570|ENST00000380539|SERPINB6	ENSG00000124570|ENST00000380539|SERPINB6	ENSG00000124570|ENST00000380539|SERPINB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2875671386719	2	472.28982	942.565087	-0.108	-5.1006E-05	-4.4569	-0.0021049	-4.5649	-0.0021559	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.87922	1	9963	9963		31.955	5.2619	1	46909000			24914	3342	16785	16795	28513	28513					0.09150671893701201
KVVHLLIITSE	11	Unmodified	_KVVHLLIITSE_					0	0	0		ENST00000444149.6_1_5:178459796-178460024:+|nuORF	ENST00000444149.6_1_5:178459796-178460024:+|nuORF	ENST00000444149.6_1_5:178459796-178460024:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3894653320312	2	626.387188	1250.75982	0.92654	0.00058037	-2.4067	-0.0015075	-1.4802	-0.00092716	626.3854005656832	109.98	1.1023	110.05	109.78	110.88	0.073685					78	37	4	0	0	0	0.78309	1	11875	11875		14.865	0	1	2583100			24915	11811	16786	16796	28514	28514					0.14447378188197035
KVVIFALTFNN	11	Unmodified	_KVVIFALTFNN_					0	0	0			REV__ENSG00000184571|ENST00000616349|PIWIL3	REV__ENSG00000184571|ENST00000616349|PIWIL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5811462402344	3	422.579929	1264.71796	0.70592	0.00029831	4.187	0.0017694	4.893	0.0020677	422.58159999345827	97.435	2.4101	97.596	96.789	99.199	0.16074					159	55	4	0	0	0	0.75164	1	10073	10073		25.068	0.79185	1	461560	+		24916	22692	16787	16797	28515	28515					0.0961882249964674
KVVIKCSC	8	2 Carbamidomethyl (C)	_KVVIKC(Carbamidomethyl (C))SC(Carbamidomethyl (C))_	KVVIKC(1)SC(1)		KVVIKC(74)SC(74)		0	2	0		ENST00000481683.5_1_1:2518487-2520915:+|nuORF;ENST00000419916.6_1_1:2519884-2520918:+|nuORF	ENST00000481683.5_1_1:2518487-2520915:+|nuORF	ENST00000481683.5_1_1:2518487-2520915:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.2672119140625	2	497.26463	992.514707	1.0163	0.00050539	3.2261	0.0016042	4.2424	0.0021096	497.26596060445695	27.745	0.82314	27.49	27.115	27.938	-0.25465					42	18	4	0	0	0	0.5397	1	1632	1632		73.975	13.003	1	593720			24917	12464	16788	16798	28516	28516	159;160				0.018150581820350453
KVVILDPK	8	Unmodified	_KVVILDPK_					0	0	0		ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.301025390625	2	456.299853	910.585153	1.12	0.00051105	1.6845	0.00076862	2.8045	0.0012797	456.3004764571391	34.144	1.6348	34.449	34.076	35.711	0.30495					98	40	4	0	0	0	0.84341	1	2572	2572		24.203	2.2429	1	1747200			24918	6533	16789	16799	28517	28517					0.12628422833643071
KVVKEVEDVF	10	Unmodified	_KVVKEVEDVF_					0	0	0			REV__nc|ENSG00000145147|O94813-3|SLIT2	REV__nc|ENSG00000145147|O94813-3|SLIT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3328857421875	2	596.334621	1190.65469	0.54724	0.00032634	-3.2869	-0.0019601	-2.7397	-0.0016338	596.3325172883492	95.985	3.4694	96.39	95.216	98.686	0.40451					232	84	4	0	0	0	0.86218	1	11482	11482		32.812	2.4947	1	1225200	+		24919	19927	16790	16800	28518	28518					0.06698836991745338
KVVKGTSFQL	10	Unmodified	_KVVKGTSFQL_					0	0	0		ENST00000475908.5_1_5:56205193-56212726:+|nuORF	ENST00000475908.5_1_5:56205193-56212726:+|nuORF	ENST00000475908.5_1_5:56205193-56212726:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8296508789062	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.70553	1	9062	9062		44.377	5.1244	1	6029400			24920	12332	16791	16801	28519	28519					0.10094577919812764
KVVKKLKL	8	Unmodified	_KVVKKLKL_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2773742675781	2	478.354963	954.695373	-0.76423	-0.00036557	-3.0527	-0.0014603	-3.817	-0.0018259	478.35337820633504	83.461	0.71626	83.916	83.642	84.358	0.45556					33	16	3	0	0	0	0.4196	1	9689	9689		13.775	0	1	817360			24921	11808	16792	16802	28520	28520					0.21621267892680862
KVVKKNQHKVI	11	Unmodified	_KVVKKNQHKVI_					0	0	0		nc|ENSG00000139734|Q9NSV4-7|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;ENSG00000139734|ENST00000400324|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.681884765625	3	440.95399	1319.84014	-1.1296	-0.00049811	-3.1772	-0.001401	-4.3068	-0.0018991	440.9524157855549	69.019	0.50655	69.085	68.747	69.254	0.065506					31	22	2	0	0	0	0.17863	1	6222	6222		14.086	0	1	58436			24922	4395	16793	16803	28521	28521					0.19301284301855048
KVVKNGLFN	9	Unmodified	_KVVKNGLFN_					0	0	0		ENST00000524019.5_1_14:102717905-102771389:-|nuORF	ENST00000524019.5_1_14:102717905-102771389:-|nuORF	ENST00000524019.5_1_14:102717905-102771389:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8034362792969	2	509.805834	1017.59712	0.075306	3.8391E-05	-4.2119	-0.0021473	-4.1366	-0.0021089	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.67345	1	8543	8543		42.396	7.1954	1	958280			24923	13209	16794	16804	28522	28522					0.08902039576844345
KVVKTRKF	8	Unmodified	_KVVKTRKF_					0	0	0		ENSG00000173376|ENST00000379692|NDNF	ENSG00000173376|ENST00000379692|NDNF	ENSG00000173376|ENST00000379692|NDNF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8136291503906	2	503.332019	1004.64948	2.3404	0.001178	-4.3783	-0.0022037	-2.0379	-0.0010257	503.32978274226394	97.56	0.67156	97.504	97.187	97.859	-0.055542					18	15	2	0	0	0	0.4196	1	10475	10475		12.207	5.0135	1	75124			24924	6853	16795	16805	28523	28523					0.14734622710454914
KVVLALACN	9	Unmodified	_KVVLALACN_					0	0	0		nc|ENSG00000152520|Q58A45-3|PAN3;ENSG00000152520|ENST00000380958|PAN3;nc|ENSG00000152520|Q58A45-2|PAN3	nc|ENSG00000152520|Q58A45-3|PAN3	nc|ENSG00000152520|Q58A45-3|PAN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774353027344	2	465.775688	929.536823	0.52254	0.00024339	3.4867	0.001624	4.0093	0.0018674	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.78536	1	8456	8456		29.15	0.89528	1	1330400			24925	5180	16796	16806	28524	28524					0.06923605922099796
KVVLALACN	9	Unmodified	_KVVLALACN_					0	0	0		nc|ENSG00000152520|Q58A45-3|PAN3;ENSG00000152520|ENST00000380958|PAN3;nc|ENSG00000152520|Q58A45-2|PAN3	nc|ENSG00000152520|Q58A45-3|PAN3	nc|ENSG00000152520|Q58A45-3|PAN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7777404785156	2	465.775688	929.536823	-0.25577	-0.00011913	4.2902	0.0019982	4.0344	0.0018791	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.72402	1	7875	7875		38.806	2.3594	1	451640			24926	5180	16796	16806	28525	28525					0.06923605922099796
KVVLASSSPVF	11	Unmodified	_KVVLASSSPVF_					0	0	0		ENSG00000079999|ENST00000171111|KEAP1	ENSG00000079999|ENST00000171111|KEAP1	ENSG00000079999|ENST00000171111|KEAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3301391601562	2	567.331882	1132.64921	-0.54401	-0.00030863	-2.6363	-0.0014957	-3.1803	-0.0018043	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.65746	1	8737	8737		37.812	0.65241	1	4477200			24927	1431	16797	16807	28526	28526					0.0881915819995811
KVVLASSSPVF	11	Unmodified	_KVVLASSSPVF_					0	0	0		ENSG00000079999|ENST00000171111|KEAP1	ENSG00000079999|ENST00000171111|KEAP1	ENSG00000079999|ENST00000171111|KEAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3291625976562	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.69248	2	11279	11231;11279		32.751	9.2278	1	6007000			24928	1431	16797	16807	28527;28528	28528					0.0881915819995811
KVVLKLVNRA	10	Unmodified	_KVVLKLVNRA_					0	0	0			REV__ENST00000427220.5_1_3:9860474-9876502:+|nuORF	REV__ENST00000427220.5_1_3:9860474-9876502:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.7503051757812	2	570.384783	1138.75501	-0.81552	-0.00046516	3.3203	0.0018939	2.5048	0.0014287	570.3864698093314	40.183	0.68475	40.772	40.431	41.116	0.58915					28	17	2	0	0	0	0.37624	1	3435	3435		26.693	5.746	1	157180	+		24929	23643	16798	16808	28529	28529					0.1911853883607364
KVVLLLGA	8	Unmodified	_KVVLLLGA_					0	0	0			REV__ENSG00000119457|ENST00000374228|SLC46A2	REV__ENSG00000119457|ENST00000374228|SLC46A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852478027344	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.82464	1	1809	1809		21.702	1.2205	1	1606100	+		24930	18353	16799	16809	28530	28530					0.13981055150509292
KVVLVPESPNL	11	Unmodified	_KVVLVPESPNL_					0	0	0		ENST00000381475.3_1:147851207-147931919:-|nuORF	ENST00000381475.3_1:147851207-147931919:-|nuORF	ENST00000381475.3_1:147851207-147931919:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8563232421875	2	597.858264	1193.70197	-0.35529	-0.00021242	-2.6795	-0.001602	-3.0348	-0.0018144	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.59499	2	9184	9004;9184		45.022	5.7694	1	1224100			24931	10956	16800	16810	28531;28532	28532					0.11287116262769814
KVVLVPESPNL	11	Unmodified	_KVVLVPESPNL_					0	0	0		ENST00000381475.3_1:147851207-147931919:-|nuORF	ENST00000381475.3_1:147851207-147931919:-|nuORF	ENST00000381475.3_1:147851207-147931919:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8558349609375	2	597.858264	1193.70197	-0.56225	-0.00033615	-2.7782	-0.001661	-3.3405	-0.0019971	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.7144	1	9661	9661		29.17	2.1227	1	2042000			24932	10956	16800	16810	28533	28533					0.11287116262769814
KVVNVRTAS	9	Unmodified	_KVVNVRTAS_					0	0	0		ENST00000604504.5_1_19:35607238-35610445:+|nuORF	ENST00000604504.5_1_19:35607238-35610445:+|nuORF	ENST00000604504.5_1_19:35607238-35610445:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.29290771484375	2	487.293091	972.571629	-0.95023	-0.00046304	1.0703	0.00052155	0.12007	5.8511E-05	487.2934854308046	90.996	2.8908	91.042	90.474	93.365	0.046448					155	69	4	0	0	0	0.7932	1	9462	9462		25.574	1.3713	1	2321800			24933	14430	16801	16811	28534	28534					0.0842456505440623
KVVPNYINKF	10	Unmodified	_KVVPNYINKF_					0	0	0		ENST00000309982.9_2_8:104241506-104241569:+|nuORF	ENST00000309982.9_2_8:104241506-104241569:+|nuORF	ENST00000309982.9_2_8:104241506-104241569:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3552856445312	2	611.353148	1220.69174	2.4219	0.0014807	2.8207	0.0017244	5.2426	0.0032051	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.86218	1	10217	10217		32.812	4.7309	1	12656000			24934	9904	16802	16812	28535	28535					0.09022553328168215
KVVPTLRRGR	10	Unmodified	_KVVPTLRRGR_					0	0	0			REV__chr4:82354154-82373468|13|18.46|0.0|13.1|-|0|HNRNPD,None|1	REV__chr4:82354154-82373468|13|18.46|0.0|13.1|-|0|HNRNPD,None|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.866943359375	2	591.383106	1180.75166	-0.7447	-0.00044041	3.7237	0.0022021	2.979	0.0017617	591.3851046898359	103.49	0.23586	103.53	103.47	103.71	0.041481					9	5	2	0	0	0	0.37624	1	11238	11238		12.812	0	1	156170	+		24935	15840	16803	16813	28536	28536					0.16851288782072515
KVVQDYLE	8	Unmodified	_KVVQDYLE_					0	0	0		ENSG00000166938|ENST00000319212|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;ENST00000525109.1_1_15:66585988-66599106:+|nuORF;ENST00000565281.5_1_15:66585934-66615040:+|nuORF	ENSG00000166938|ENST00000319212|DIS3L	ENSG00000166938|ENST00000319212|DIS3L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.2667236328125	2	497.266207	992.517862	1.0163	0.00050539	0.054392	2.7047E-05	1.0707	0.00053244	497.26596060445695	27.745	0.82314	27.49	27.115	27.938	-0.25465					42	18	4	0	0	0	0.79403	1	1656	1656		63.306	15.391	1	593720			24936	6250	16804	16814	28537	28537					0.021303478320419345
KVVQEMKI	8	Unmodified	_KVVQEMKI_					0	0	0		ENSG00000198162|ENST00000356554|MAN1A2	ENSG00000198162|ENST00000356554|MAN1A2	ENSG00000198162|ENST00000356554|MAN1A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7904357910156	2	487.788795	973.563038	0.54993	0.00026825	3.015	0.0014707	3.565	0.001739	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.8347	1	8307	8307		23.042	0.0057756	1	633420			24937	8248	16805	16815	28538	28538					0.0751987509358969
KVVQIEQVRP	10	Unmodified	_KVVQIEQVRP_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3587646484375	2	598.361505	1194.70846	-0.10487	-6.275E-05	-3.7081	-0.0022188	-3.8129	-0.0022815	598.3593234657415	94.339	4.754	94.774	93.51	98.264	0.43539					199	117	2	0	0	0	0.67571	2	11427	11217;11427		45.972	11.8	1	27641000	+		24938	18113	16806	16816	28539;28540	28540					0.11889054214111638
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.255859375	3	437.257738	1308.75138	-1.0127	-0.0004428	0.097666	4.2705E-05	-0.91501	-0.00040009	437.25769841228777	99.435	2.9287	99.435	98.234	101.16	0					165	70	3	0	0	0	0.72374	1	10110	10110		27.644	5.0823	1	385900	+		24939	18113	16807	16817	28541	28541					0.10935824271541605
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2565002441406	3	437.257738	1308.75138	-0.16089	-7.0349E-05	-0.76824	-0.00033592	-0.92913	-0.00040627	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.74002	1	10637	10637		24.276	0.04411	1	727380	+		24940	18113	16807	16817	28542	28542					0.10935824271541605
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2569274902344	3	437.257738	1308.75138	2.3979	0.0010485	-3.3832	-0.0014793	-0.98538	-0.00043086	437.25617297786823	99.22	2.8692	99.166	98.246	101.11	-0.053734					176	66	3	0	0	0	0.58516	3	10793	10699;10783;10793		45.908	6.035	1	988170	+		24941	18113	16807	16817	28543;28544;28545	28545					0.10935824271541605
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2566833496094	3	437.257738	1308.75138	2.1229	0.00092824	-3.14	-0.001373	-1.0171	-0.00044476	437.2563089738452	99.067	2.7047	99.115	98.232	100.94	0.048157					189	62	4	0	0	0	0.6396	1	10613	10613		39.873	16.495	1	798600	+		24942	18113	16807	16817	28546	28546					0.10935824271541605
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.25592041015625	3	437.257738	1308.75138	-1.4909	-0.0006519	0.61457	0.00026872	-0.87632	-0.00038318	437.257922541183	97.247	2.1693	97.478	96.225	98.394	0.23103					136	50	3	0	0	0	0.69687	1	10052	10052		32.034	8.6562	1	478050	+		24943	18113	16807	16817	28547	28547					0.10935824271541605
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2572021484375	3	437.257738	1308.75138	0.72446	0.00031677	-1.611	-0.00070442	-0.88654	-0.00038765	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.70847	3	10321	10321;10358;10381		30.139	9.8108	1	670840	+		24944	18113	16807	16817	28548;28549;28550	28548					0.10935824271541605
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	437.257738	1308.75138	-1.0386	-0.00045414	0.59691	0.000261	-0.4417	-0.00019314	437.2579609169344	97.669	1.3541	97.669	97.249	98.603	0	0.14062	0.0024325	NaN	32.034	62	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172420	+		24945	18113	16807	16817							0.10935824271541605
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	437.257738	1308.75138	-0.16102	-7.0407E-05	-0.80151	-0.00035047	-0.96253	-0.00042087	437.25731433565164	97.606	2.1916	97.663	96.387	98.579	0.056839	0.1343	0.00059809	NaN	32.034	118	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	312600	+		24946	18113	16807	16817							0.10935824271541605
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	437.257738	1308.75138	2.1731	0.00095019	-2.9701	-0.0012987	-0.79706	-0.00034852	437.2563702853642	97.544	2.1788	97.489	96.198	98.377	-0.055542	-0.040077	-0.0022466	NaN	32.034	130	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	330870	+		24947	18113	16807	16817							0.10935824271541605
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	437.257738	1308.75138	0.7066	0.00030897	-1.5491	-0.00067738	-0.84254	-0.00036841	437.25702551453304	97.287	2.1363	97.451	96.19	98.327	0.16316	-0.078229	-0.00038263	NaN	32.034	129	49	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	293250	+		24948	18113	16807	16817							0.10935824271541605
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	437.257738	1308.75138	1.2048	0.0005268	-2.0868	-0.00091246	-0.88201	-0.00038566	437.25677746267473	96.974	1.1475	97.379	96.969	98.117	0.40498	-0.14991	-0.0010879	NaN	32.034	57	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252970	+		24949	18113	16807	16817							0.10935824271541605
KVVQIEQVRPN	11	Unmodified	_KVVQIEQVRPN_					0	0	0			REV__ENSG00000115364|ENST00000393909|MRPL19	REV__ENSG00000115364|ENST00000393909|MRPL19	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	437.257738	1308.75138	1.3326	0.00058269	-1.9999	-0.00087446	-0.66726	-0.00029176	437.2568985731291	97.172	1.9771	97.562	96.569	98.546	0.39065	0.033547	-0.00097388	NaN	32.034	95	47	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	233730	+		24950	18113	16807	16817							0.10935824271541605
KVVQLEDIRLL	11	Unmodified	_KVVQLEDIRLL_					0	0	0			REV__nc|ENSG00000104517|O95071-2|UBR5	REV__nc|ENSG00000104517|O95071-2|UBR5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9395446777344	3	442.609889	1324.80784	-0.66526	-0.00029445	-2.6176	-0.0011586	-3.2828	-0.001453	442.60884574482566	56.138	0.42819	56.101	55.786	56.215	-0.036827					24	17	2	0	0	0	0.17729	1	4734	4734		12.957	0	1	140580	+		24951	17461	16808	16818	28551	28551					0.15842452108199723
KVVQQGVFP	9	Unmodified	_KVVQQGVFP_					0	0	0			REV__nc|ENSG00000154328|Q969S2-4|NEIL2	REV__nc|ENSG00000154328|Q969S2-4|NEIL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.29046630859375	2	501.292559	1000.57057	-0.50311	-0.0002522	-3.7566	-0.0018832	-4.2597	-0.0021354	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.78536	1	8644	8644		29.15	0	1	10459000	+		24952	20384	16809	16819	28552	28552					0.07030350685522535
KVVQQGVFP	9	Unmodified	_KVVQQGVFP_					0	0	0			REV__nc|ENSG00000154328|Q969S2-4|NEIL2	REV__nc|ENSG00000154328|Q969S2-4|NEIL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2900390625	2	501.292559	1000.57057	-0.86867	-0.00043546	-3.0512	-0.0015296	-3.9199	-0.001965	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.78058	1	9791	9791		30.504	1.3336	1	2445400	+		24953	20384	16809	16819	28553	28553					0.07030350685522535
KVVRGKLPQP	10	Unmodified	_KVVRGKLPQP_					0	0	0			REV__nc|ENSG00000168748|P43166-2|CA7	REV__nc|ENSG00000168748|P43166-2|CA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.3654174804688	2	561.361308	1120.70806	0.36083	0.00020256	3.644	0.0020456	4.0049	0.0022482	561.3631992343464	46.11	1.1029	46.106	45.577	46.68	-0.0041618					45	26	2	0	0	0	0.6116	1	3720	3720		49.442	17.487	1	163920	+		24954	21514	16810	16820	28554	28554					0.15253679284933241
KVVRGKLPQP	10	Unmodified	_KVVRGKLPQP_					0	0	0			REV__nc|ENSG00000168748|P43166-2|CA7	REV__nc|ENSG00000168748|P43166-2|CA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	561.3634643554688	2	561.361308	1120.70806	0.078634	4.4142E-05	4.437	0.0024908	4.5156	0.0025349	561.3635150003997	46.064	0.90353	45.985	45.457	46.361	-0.079006					58	25	3	0	0	0	0.85251	1	3332	3332		19.997	0	1	158090	+		24955	21514	16810	16820	28555	28555					0.15253679284933241
KVVRGRSHAI	10	Unmodified	_KVVRGRSHAI_					0	0	0			REV__nc|ENSG00000170234|Q96N64-3|PWWP2A	REV__nc|ENSG00000170234|Q96N64-3|PWWP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.8455810546875	2	561.846356	1121.67816	1.4106	0.00079252	-2.5998	-0.0014607	-1.1893	-0.00066819	561.8447337891968	96.819	2.411	96.866	96.355	98.766	0.047798					140	55	5	0	0	0	0.86763	1	10322	10322		26.693	1.1189	1	1810100	+		24956	21637	16811	16821	28556	28556					0.12218740339585565
KVVRHARF	8	Unmodified	_KVVRHARF_					0	0	0			REV__nc|ENSG00000137054|Q9GZS1-1|POLR1E;REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.81024169921875	2	506.811785	1011.60902	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.961	1	61.062	60.562	61.562	0.10082								0	0	0	0.30252	1	5299	5299		19.36	1.0979	1		+		24957	29877;26764	16812	16822	28557	28557					0.10367701110692451
KVVRQVQS	8	Unmodified	_KVVRQVQS_					0	0	0			REV__ENSG00000248905|ENST00000616417|FMN1	REV__ENSG00000248905|ENST00000616417|FMN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2868957519531	2	472.287808	942.561064	-0.90774	-0.00042872	2.0184	0.00095325	1.1106	0.00052453	472.28888499664725	100.84	1.0422	101.04	100.24	101.28	0.2058					42	24	2	0	0	0	0.8347	1	10565	10565		23.042	2.0956	1	219940	+		24958	23863	16813	16823	28558	28558					0.0874858239999412
KVVSHSVVC	9	Unmodified	_KVVSHSVVC_					0	0	0		ENST00000588559.5_1_19:55705613-55720813:-|nuORF;nc|ENSG00000080031|Q9HD43-3|PTPRH;nc|ENSG00000080031|Q9HD43-2|PTPRH;ENSG00000080031|ENST00000376350|PTPRH	ENST00000588559.5_1_19:55705613-55720813:-|nuORF	ENST00000588559.5_1_19:55705613-55720813:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27734375	2	479.262945	956.511337	0.63171	0.00030276	2.6755	0.0012823	3.3072	0.001585	479.2640526971582	83.985	0.2988	84.133	84.046	84.345	0.14793					10	6	2	0	0	0	0.20789	1	8162	8162		34.173	16.808	1	62192			24959	1433	16814	16824	28559	28559					0.03134131399679063
KVVSVSGK	8	Unmodified	_KVVSVSGK_					0	0	0			REV__ENSG00000095777|ENST00000642920|MYO3A	REV__ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.2518615722656	2	402.252903	802.491253	0.012696	5.1069E-06	-0.76035	-0.00030585	-0.74765	-0.00030074	402.25244995223795	19.772	0.32962	19.843	19.703	20.032	0.070711					25	15	2	0	0	0	0.81184	1	449	449		19.997	1.6724	1	128880	+		24960	17068	16815	16825	28560	28560					0.08210703731378999
KVVTALNVM	9	Unmodified	_KVVTALNVM_					0	0	0		ENSG00000166866|ENST00000300119|MYO1A	ENSG00000166866|ENST00000300119|MYO1A	ENSG00000166866|ENST00000300119|MYO1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7937316894531	2	487.788795	973.563038	-0.48923	-0.00023864	4.277	0.0020863	3.7878	0.0018476	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.77244	1	9855	9855		32.812	0.85756	1	1599600			24961	6239	16816	16826	28561	28561					0.07519875093578321
KVVVHGQPRN	10	Unmodified	_KVVVHGQPRN_					0	0	0			REV__ENST00000476764.2_1_3:197281466-197282409:-|nuORF	REV__ENST00000476764.2_1_3:197281466-197282409:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.330322265625	2	567.330539	1132.64652	1.492	0.00084643	-2.5283	-0.0014344	-1.0363	-0.00058793	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.8651	1	9433	9433		25.574	1.3713	1	5346500	+		24962	27341	16817	16827	28562	28562					0.0855074758567298
KVVVHGQPRN	10	Unmodified	_KVVVHGQPRN_					0	0	0			REV__ENST00000476764.2_1_3:197281466-197282409:-|nuORF	REV__ENST00000476764.2_1_3:197281466-197282409:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.329833984375	2	567.330539	1132.64652	0.4851	0.00027521	-1.8618	-0.0010563	-1.3767	-0.00078107	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.82886	1	9509	9509		37.812	8.6415	1	18558000	+		24963	27341	16817	16827	28563	28563					0.0855074758567298
KVVVHGQPRN	10	Unmodified	_KVVVHGQPRN_					0	0	0			REV__ENST00000476764.2_1_3:197281466-197282409:-|nuORF	REV__ENST00000476764.2_1_3:197281466-197282409:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3300170898438	2	567.330539	1132.64652	-1.3957	-0.00079181	0.07479	4.2431E-05	-1.3209	-0.00074938	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.8651	1	9489	9489		25.574	0	1	17338000	+		24964	27341	16817	16827	28564	28564					0.0855074758567298
KVVVHGQPRN	10	Unmodified	_KVVVHGQPRN_					0	0	0			REV__ENST00000476764.2_1_3:197281466-197282409:-|nuORF	REV__ENST00000476764.2_1_3:197281466-197282409:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3300170898438	2	567.330539	1132.64652	0.27026	0.00015333	-1.2412	-0.00070419	-0.97098	-0.00055087	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.86348	1	11075	11075		31.53	7.0106	1	6007000	+		24965	27341	16817	16827	28565	28565					0.0855074758567298
KVVVKTKTEY	10	Unmodified	_KVVVKTKTEY_					0	0	0		ENSG00000168824|ENST00000621129|NSG1	ENSG00000168824|ENST00000621129|NSG1	ENSG00000168824|ENST00000621129|NSG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8560180664062	2	597.858264	1193.70197	-0.43133	-0.00025788	-2.8188	-0.0016852	-3.2501	-0.0019431	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.8608	1	9858	9858		34.173	1.3601	1	6857100			24966	6442	16818	16828	28566	28566					0.11287116262769814
KVVVKTKTEY	10	Unmodified	_KVVVKTKTEY_					0	0	0		ENSG00000168824|ENST00000621129|NSG1	ENSG00000168824|ENST00000621129|NSG1	ENSG00000168824|ENST00000621129|NSG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8560180664062	2	597.858264	1193.70197	-1.2963	-0.00077498	-2.0956	-0.0012529	-3.3918	-0.0020278	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.86763	1	9232	9232		26.693	1.1189	1	2401200			24967	6442	16818	16828	28567	28567					0.11287116262769814
KVVVLVVG	8	Unmodified	_KVVVLVVG_					0	0	0			REV__nc|ENSG00000225697|Q9BXS9-7|SLC26A6	REV__nc|ENSG00000225697|Q9BXS9-7|SLC26A6	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7855224609375	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.202	1	31.314	30.814	31.814	0.11198								0	0	0	0.31173	1	1417	1417		9.4706	0	1		+		24968	30208	16819	16829	28568	28568					0.1398105515052066
KVVVLVVG	8	Unmodified	_KVVVLVVG_					0	0	0			REV__nc|ENSG00000225697|Q9BXS9-7|SLC26A6	REV__nc|ENSG00000225697|Q9BXS9-7|SLC26A6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7844543457031	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.81724	1	1811	1811		14.664	0	1	1879900	+		24969	30208	16819	16829	28569	28569					0.1398105515052066
KVVVPGIR	8	Unmodified	_KVVVPGIR_					0	0	0		nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000100731|Q96RV3-3|PCNX1;ENSG00000100731|ENST00000304743|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.2925720214844	2	434.292362	866.570172	-0.16844	-7.3153E-05	0.35174	0.00015276	0.1833	7.9605E-05	434.2923797730273	74.311	0.86466	74.354	73.988	74.852	0.042908					61	35	2	0	0	0	0.85277	1	7107	7107		25.45	4.9683	1	657810			24970	1864	16820	16830	28570	28570					0.13154975756310705
KVVVRENN	8	Unmodified	_KVVVRENN_					0	0	0			REV__ENSG00000070770|ENST00000262506|CSNK2A2	REV__ENSG00000070770|ENST00000262506|CSNK2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2774658203125	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.87064	4	8650	8650;8674;8729;9048		35.618	1.4457	1	7289200	+		24971	16613	16821	16831	28571;28572;28573;28574	28571					0.06031992020314192
KVVVRENN	8	Unmodified	_KVVVRENN_					0	0	0			REV__ENSG00000070770|ENST00000262506|CSNK2A2	REV__ENSG00000070770|ENST00000262506|CSNK2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2774353027344	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.87479	1	8519	8519		30.504	0.6621	1	7040000	+		24972	16613	16821	16831	28575	28575					0.06031992020314192
KVVVRENN	8	Unmodified	_KVVVRENN_					0	0	0			REV__ENSG00000070770|ENST00000262506|CSNK2A2	REV__ENSG00000070770|ENST00000262506|CSNK2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2774658203125	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.91472	1	8258	8258		44.117	9.9443	1	6593200	+		24973	16613	16821	16831	28576	28576					0.06031992020314192
KVVVRENN	8	Unmodified	_KVVVRENN_					0	0	0			REV__ENSG00000070770|ENST00000262506|CSNK2A2	REV__ENSG00000070770|ENST00000262506|CSNK2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.277587890625	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.88601	1	7903	7903		34.173	5.023	1	1785900	+		24974	16613	16821	16831	28577	28577					0.06031992020314192
KVVVRENN	8	Unmodified	_KVVVRENN_					0	0	0			REV__ENSG00000070770|ENST00000262506|CSNK2A2	REV__ENSG00000070770|ENST00000262506|CSNK2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774963378906	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.87064	1	8061	8061		29.15	0	1	6441000	+		24975	16613	16821	16831	28578	28578					0.06031992020314192
KVVVRENN	8	Unmodified	_KVVVRENN_					0	0	0			REV__ENSG00000070770|ENST00000262506|CSNK2A2	REV__ENSG00000070770|ENST00000262506|CSNK2A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27728271484375	2	479.277441	956.540328	0.28639	0.00013726	-0.32449	-0.00015552	-0.038098	-1.826E-05	479.27712266759204	81.87	2.8073	82.296	80.642	83.45	0.42646					178	68	3	0	0	0	0.89043	1	9508	9508		35.618	0.41757	1	1790000	+		24976	16613	16821	16831	28579	28579					0.06031992020314192
KVVVRENN	8	Unmodified	_KVVVRENN_					0	0	0			REV__ENSG00000070770|ENST00000262506|CSNK2A2	REV__ENSG00000070770|ENST00000262506|CSNK2A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2772216796875	2	479.277441	956.540328	1.0158	0.00048684	-0.8977	-0.00043025	0.11808	5.6591E-05	479.27692974068503	87.133	2.5482	87.579	87.224	89.772	0.44629					117	61	3	0	0	0	0.88601	1	10229	10229		34.173	1.3601	1	776520	+		24977	16613	16821	16831	28580	28580					0.06031992020314192
KVVVRENN	8	Unmodified	_KVVVRENN_					0	0	0			REV__ENSG00000070770|ENST00000262506|CSNK2A2	REV__ENSG00000070770|ENST00000262506|CSNK2A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27740478515625	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.8347	3	9736	9736;9953;10292		53.351	12.529	1	6350300	+		24978	16613	16821	16831	28581;28582;28583	28581					0.06031992020314192
KVVVSPAVL	9	Unmodified	_KVVVSPAVL_					0	0	0			REV__nc|ENSG00000198589|P50851-2|LRBA	REV__nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3010559082031	2	456.299853	910.585153	-0.11111	-5.0701E-05	2.9884	0.0013636	2.8773	0.0013129	456.3010566410468	35.268	1.48	35.256	34.768	36.248	-0.012203					106	34	4	0	0	0	0.74721	1	2199	2199		37.159	1.9584	1	794600	+		24979	23342	16822	16832	28584	28584					0.1262842283365444
KVVVSPAVL	9	Unmodified	_KVVVSPAVL_					0	0	0			REV__nc|ENSG00000198589|P50851-2|LRBA	REV__nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30096435546875	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.78058	1	2066	2066		30.504	2.6214	1	1220600	+		24980	23342	16822	16832	28585	28585					0.1262842283365444
KVVWRGLDHL	10	Unmodified	_KVVWRGLDHL_					0	0	0			REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.8648681640625	2	611.85639	1221.69823	0.66726	0.00040827	3.8545	0.0023584	4.5217	0.0027667	611.8584447110941	15.922	0.21769	15.323	15.248	15.465	-0.59873					5	4	2	0	0	0	0.86621	1	62	62		14.865	0	1	19169	+		24981	29210	16823	16833	28586	28586					0.09624491279578251
KVWAGIIL	8	Unmodified	_KVWAGIIL_					0	0	0			REV__ENST00000285518.10_1_8:6616554-6616653:+|nuORF	REV__ENST00000285518.10_1_8:6616554-6616653:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.27471923828125	2	450.289288	898.564024	-0.37072	-0.00016693	-2.6793	-0.0012065	-3.05	-0.0013734	450.2887968104143	93.017	0.583	93.467	93.238	93.821	0.44988					19	13	2	0	0	0	0.4196	1	11133	11133		26.796	0	1	90444	+		24982	24636	16824	16834	28587	28587					0.11068457524800124
KVWARVGL	8	Unmodified	_KVWARVGL_					0	0	0			REV__ENST00000431905.1_1_2:43016305-43019676:-|nuORF	REV__ENST00000431905.1_1_2:43016305-43019676:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.79034423828125	2	464.789987	927.565421	-0.5794	-0.0002693	2.1371	0.00099331	1.5577	0.00072401	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.86288	1	2270	2270		26.796	0	1	409180	+		24983	20859	16825	16835	28588	28588					0.09874091613551172
KVWHRVEARL	10	Unmodified	_KVWHRVEARL_					0	0	0			REV__ENST00000581103.1_1_18:66541938-66542061:+|nuORF	REV__ENST00000581103.1_1_18:66541938-66542061:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5977783203125	3	431.922801	1292.74657	2.7175	0.0011738	3.2343	0.001397	5.9519	0.0025707	432.2583626094485	105.11	2.9644	105.07	103.64	106.61	-0.04039					89	70	2	0	0	0	0.37624	1	11756	11756		16.007	0	1	109830	+		24984	29042	16826	16836	28589	28589					0.11190984919471703
KVWIIEDVREY	11	Unmodified	_KVWIIEDVREY_					0	0	0			REV__ENSG00000165819|ENST00000298717|METTL3	REV__ENSG00000165819|ENST00000298717|METTL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.929443359375	3	483.929398	1448.76637	-0.87151	-0.00042175	1.2217	0.0005912	0.35015	0.00016945	483.92996305305127	26.737	0.71714	26.803	26.419	27.136	0.066875					82	33	3	0	0	0	0.75779	1	1034	1034		20.315	0.28454	1	283730	+		24985	21225	16827	16837	28590	28590					0.05993271348893359
KVWLSRAPLP	10	Unmodified	_KVWLSRAPLP_					0	0	0		ENST00000293826.4_1_17:7464569-7464860:+|nuORF	ENST00000293826.4_1_17:7464569-7464860:+|nuORF	ENST00000293826.4_1_17:7464569-7464860:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.8585205078125	2	583.855858	1165.69716	2.8156	0.0016439	2.3715	0.0013846	5.1872	0.0030286	583.8570467437777	98.7	2.5935	98.645	98.156	100.75	-0.054817					154	59	5	0	0	0	0.8545	1	10665	10665		36.447	0	1	1920100			24986	9698	16828	16838	28591	28591					0.1209427691064775
KVWRGTLA	8	Unmodified	_KVWRGTLA_					0	0	0		ENSG00000176658|ENST00000318217|MYO1D;ENST00000585094.1_1_17:30986131-31048108:-|nuORF	ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.778076171875	2	465.779619	929.544686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.603	1	79.603	79.103	80.103	0								0	0	0	0.30045	1	7325	7325		40.573	3.4135	1				24987	7093	16829	16839	28592	28592					0.07709501233910032
KVWSDPFGRK	10	Unmodified	_KVWSDPFGRK_					0	0	0		ENSG00000250317|ENST00000506197|SMIM20;nc|ENSG00000250317|Q8N5G0-2|SMIM20;ENST00000515764.2_1_4:25863762-25930810:+|nuORF;ENST00000522137.1_1_4:25929909-25930810:+|nuORF	ENSG00000250317|ENST00000506197|SMIM20	ENSG00000250317|ENST00000506197|SMIM20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.22454833984375	3	407.224257	1218.65094	0.63031	0.00025668	-0.10472	-4.2645E-05	0.52558	0.00021403	407.224159987621	38.35	1.8222	38.691	38.303	40.125	0.34187					68	43	3	0	0	0	0.21357	3	3129	3129;3141;3153		82.831	41.75	1	2795700			24988	8845	16830	16840	28593;28594;28595	28593					0.050362120085537754
KVWSDPFGRK	10	Unmodified	_KVWSDPFGRK_					0	0	0		ENSG00000250317|ENST00000506197|SMIM20;nc|ENSG00000250317|Q8N5G0-2|SMIM20;ENST00000515764.2_1_4:25863762-25930810:+|nuORF;ENST00000522137.1_1_4:25929909-25930810:+|nuORF	ENSG00000250317|ENST00000506197|SMIM20	ENSG00000250317|ENST00000506197|SMIM20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.2244873046875	3	407.224257	1218.65094	-0.41197	-0.00016776	1.0153	0.00041345	0.60331	0.00024568	407.2245736456321	38.187	1.5763	38.709	38.357	39.934	0.52236					95	37	4	0	0	0	0.22852	3	3147	3134;3147;3159		80.916	33.961	1	3063800			24989	8845	16830	16840	28596;28597;28598	28597					0.050362120085537754
KVYENYPTY	9	Unmodified	_KVYENYPTY_					0	0	0		ENSG00000124795|ENST00000652689|DEK;nc|ENSG00000124795|P35659-2|DEK	ENSG00000124795|ENST00000652689|DEK	ENSG00000124795|ENST00000652689|DEK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	588.7821044921875	2	588.782222	1175.54989	-1.1393	-0.00067082	0.50627	0.00029808	-0.63307	-0.00037274	588.7824936763428	44.702	1.5406	45.165	44.785	46.326	0.46313					92	37	5	0	0	0	8.971600000000001E-98	6	4099	4090;4099;4111;4123;4135;4149		233.57	83.203	1	19491000			24990	3363	16831	16841	28599;28600;28601;28602;28603;28604	28600					-0.030862844848115856
KVYENYPTY	9	Unmodified	_KVYENYPTY_					0	0	0		ENSG00000124795|ENST00000652689|DEK;nc|ENSG00000124795|P35659-2|DEK	ENSG00000124795|ENST00000652689|DEK	ENSG00000124795|ENST00000652689|DEK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.7819213867188	2	588.782222	1175.54989	-1.066	-0.00062762	0.24012	0.00014138	-0.82583	-0.00048624	588.7823195546284	44.473	1.092	45.317	44.986	46.078	0.84438					85	26	5	0	0	0	7.6936E-65	6	4094	4072;4082;4094;4105;4118;4130		214.23	83.556	1	17093000			24991	3363	16831	16841	28605;28606;28607;28608;28609;28610	28607					-0.030862844848115856
KVYGDVAKAL	10	Unmodified	_KVYGDVAKAL_					0	0	0			REV__nc|ENSG00000126561|P42229-2|STAT5A	REV__nc|ENSG00000126561|P42229-2|STAT5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.3106079101562	2	532.310949	1062.60735	0.76901	0.00040935	-0.63476	-0.00033789	0.13426	7.1466E-05	532.3104006831984	33.304	0.75595	33.474	33.187	33.943	0.16971					39	17	4	0	0	0	0.54701	1	2379	2379		52.937	3.4007	1	903260	+		24992	18705	16832	16842	28611	28611					0.07854602511406483
KVYGRVVE	8	Unmodified	_KVYGRVVE_					0	0	0		ENST00000396326.2_1_10:30807341-30807599:-|nuORF	ENST00000396326.2_1_10:30807341-30807599:-|nuORF	ENST00000396326.2_1_10:30807341-30807599:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.27581787109375	2	475.276909	948.539266	-0.75769	-0.00036011	0.7034	0.00033431	-0.054287	-2.5801E-05	475.27711602066205	22.47	0.43904	21.859	21.592	22.031	-0.6107					16	10	2	0	0	0	0.87479	1	909	909		30.504	0	1	102270			24993	11115	16833	16843	28612	28612					0.06293777651421806
KVYIKTHG	8	Unmodified	_KVYIKTHG_					0	0	0		ENSG00000134901|ENST00000376004|POGLUT2;ENST00000460338.5_1_13:103443606-103451020:-|nuORF	ENSG00000134901|ENST00000376004|POGLUT2	ENSG00000134901|ENST00000376004|POGLUT2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.2761535644531	2	473.279452	944.544351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.491	1	79.59	79.09	80.09	0.098701								0	0	0	0.29245	1	7502	7502		30.504	1.3541	1				24994	3969	16834	16844	28613	28613					0.06986081514048692
KVYNGILEK	9	Unmodified	_KVYNGILEK_					0	0	0		ENSG00000109689|ENST00000467087|STIM2;nc|ENSG00000109689|Q9P246-2|STIM2;ENST00000467011.5_1_4:27022655-27024615:+|nuORF	ENSG00000109689|ENST00000467087|STIM2	ENSG00000109689|ENST00000467087|STIM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.3111572265625	2	532.310949	1062.60735	0.76901	0.00040935	-0.63476	-0.00033789	0.13426	7.1466E-05	532.3104006831984	33.304	0.75595	33.474	33.187	33.943	0.16971					39	17	4	0	0	0	0.039957	1	2390	2390		112.41	35.564	1	903260			24995	2478	16835	16845	28614	28614					0.0785460251142922
KVYNGILEK	9	Unmodified	_KVYNGILEK_					0	0	0		ENSG00000109689|ENST00000467087|STIM2;nc|ENSG00000109689|Q9P246-2|STIM2;ENST00000467011.5_1_4:27022655-27024615:+|nuORF	ENSG00000109689|ENST00000467087|STIM2	ENSG00000109689|ENST00000467087|STIM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.3112182617188	2	532.310949	1062.60735	0.90081	0.00047951	-0.87599	-0.0004663	0.02482	1.3212E-05	532.3103345582842	33.298	0.7547	33.51	33.228	33.983	0.21168					39	17	3	0	0	0	0.10914	3	2403	2393;2403;2415		90.601	24.798	1	910200			24996	2478	16835	16845	28615;28616;28617	28616					0.0785460251142922
KVYNIQIRY	9	Unmodified	_KVYNIQIRY_					0	0	0		ENSG00000043462|ENST00000046794|LCP2	ENSG00000043462|ENST00000046794|LCP2	ENSG00000043462|ENST00000046794|LCP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.8423461914062	2	598.842948	1195.67134	-0.55475	-0.00033221	0.10182	6.0976E-05	-0.45292	-0.00027123	598.843071957035	48.219	0.95942	48.689	48.194	49.153	0.46941					70	23	5	0	0	0	0.026451	5	4615	4615;4625;4638;4649;4662		120.62	57.087	1	5892900			24997	942	16836	16846	28618;28619;28620;28621;28622	28618					0.08133382668370359
KVYNIQIRY	9	Unmodified	_KVYNIQIRY_					0	0	0		ENSG00000043462|ENST00000046794|LCP2	ENSG00000043462|ENST00000046794|LCP2	ENSG00000043462|ENST00000046794|LCP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.8422241210938	2	598.842948	1195.67134	-0.59473	-0.00035615	0.41999	0.00025151	-0.17474	-0.00010464	598.8431691150735	48.024	0.64759	48.947	48.622	49.269	0.92315					51	15	4	0	0	0	0.034856	5	4606	4606;4616;4629;4640;4651		115.46	41.658	1	5664900			24998	942	16836	16846	28623;28624;28625;28626;28627	28623					0.08133382668370359
KVYNKLKLMA	10	Unmodified	_KVYNKLKLMA_					0	0	0		nc|ENSG00000143952|Q9P1Q0-3|VPS54;nc|ENSG00000143952|Q9P1Q0-4|VPS54;nc|ENSG00000143952|Q9P1Q0-2|VPS54;ENSG00000143952|ENST00000272322|VPS54	nc|ENSG00000143952|Q9P1Q0-3|VPS54	nc|ENSG00000143952|Q9P1Q0-3|VPS54	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3666381835938	2	604.365201	1206.71585	-0.16845	-0.00010181	3.1303	0.0018918	2.9618	0.00179	604.3669303033663	107.81	0.85171	107.81	107.02	107.87	0					52	20	4	0	0	0	0.86718	1	11121	11121		27.882	4.3595	1	11686000			24999	4679	16837	16847	28628	28628					0.12076070490184065
KVYVNLLGPP	10	Unmodified	_KVYVNLLGPP_					0	0	0			REV__nc|ENSG00000173482|P28827|PTPRM	REV__nc|ENSG00000173482|P28827|PTPRM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.3273315429688	2	550.329142	1098.64373	-0.4914	-0.00027043	-3.2081	-0.0017655	-3.6995	-0.0020359	550.3274966608972	100.46	1.192	100.46	99.887	101.08	0					71	27	3	0	0	0	0.71042	1	10236	10236		44.117	6.9577	1	339490	+		25000	21928	16838	16848	28629	28629					0.09835479408161518
KWAGRLLL	8	Unmodified	_KWAGRLLL_					0	0	0			REV__ENST00000487977.1_1_1:207990694-207995609:-|nuORF	REV__ENST00000487977.1_1_1:207990694-207995609:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8057861328125	2	478.805637	955.596721	-0.92452	-0.00044266	2.2693	0.0010865	1.3448	0.00064388	478.80664804898805	39.433	1.9403	39.444	38.3	40.24	0.010708					89	52	2	0	0	0	0.82419	1	2423	2423		13.775	0.81615	1	287670	+		25001	27587	16839	16849	28630	28630					0.11714664647661266
KWAGRLLL	8	Unmodified	_KWAGRLLL_					0	0	0			REV__ENST00000487977.1_1_1:207990694-207995609:-|nuORF	REV__ENST00000487977.1_1_1:207990694-207995609:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.80242919921875	2	478.805637	955.596721	-2.1913	-0.0010492	1.3495	0.00064614	-0.84178	-0.00040305	478.8061406240579	40.099	1.5963	40.688	39.312	40.908	0.58915					89	37	4	0	0	0	0.82464	1	3404	3404		21.702	2.3424	1	1970000	+		25002	27587	16839	16849	28631	28631					0.11714664647661266
KWEVDGNF	8	Unmodified	_KWEVDGNF_					0	0	0			REV__nc|ENSG00000070985|Q9NZQ8-2|TRPM5	REV__nc|ENSG00000070985|Q9NZQ8-2|TRPM5	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.7328796386719	2	497.735074	993.455596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.689	1	29.674	29.174	30.174	-0.015167								0	0	0	0.29703	1	1505	1505		37.159	1.5408	1		+		25003	16619	16840	16850	28632	28632					-0.04139378516288161
KWFRLKKSA	9	Unmodified	_KWFRLKKSA_					0	0	0			REV__ENST00000503146.5_1_4:152375928-152487344:+|nuORF	REV__ENST00000503146.5_1_4:152375928-152487344:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.35302734375	2	582.356025	1162.6975	-0.28408	-0.00016544	-3.6405	-0.0021201	-3.9246	-0.0022855	582.3539590095555	107.8	1.0319	107.8	106.84	107.87	0					66	24	3	0	0	0	0.78536	1	11175	11175		29.15	3.5755	1	7275300	+		25004	27839	16841	16851	28633	28633					0.12265696630515777
KWGICLIYIL	10	Unmodified	_KWGICLIYIL_					0	0	0		ENST00000608354.1_1_22:30642479-30642794:+|nuORF	ENST00000608354.1_1_22:30642479-30642794:+|nuORF	ENST00000608354.1_1_22:30642479-30642794:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3558349609375	2	611.356845	1220.69914	2.4219	0.0014807	-3.2262	-0.0019723	-0.80426	-0.00049169	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.86305	1	10253	10253		31.955	0.42505	1	12656000			25005	14474	16842	16852	28634	28634					0.09761569604233955
KWGLEGLVTT	10	Unmodified	_KWGLEGLVTT_					0	0	0			REV__ENSG00000080224|ENST00000389672|EPHA6	REV__ENSG00000080224|ENST00000389672|EPHA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3064575195312	2	552.308406	1102.60226	-1.4446	-0.00079788	-2.0305	-0.0011215	-3.4752	-0.0019194	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.86218	1	9311	9311		32.812	3.6424	1	1677300	+		25006	16798	16843	16853	28635	28635					0.055062986488110255
KWGRKGWPATG	11	Unmodified	_KWGRKGWPATG_					0	0	0			REV__ENST00000460725.5_1_2:113955061-113955313:+|nuORF	REV__ENST00000460725.5_1_2:113955061-113955313:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3358764648438	2	622.338364	1242.66217	-0.073789	-4.5921E-05	-3.0515	-0.0018991	-3.1253	-0.001945	622.3363752507829	111.19	1.2568	111.19	110.57	111.83	0					110	41	4	0	0	0	0.6921	1	11568	11568		32.812	2.3088	1	190840	+		25007	27015	16844	16854	28636	28636					0.05055034102679201
KWHKLSLA	8	Unmodified	_KWHKLSLA_					0	0	0		ENST00000547751.5_1_12:45059243-45269664:-|nuORF;chr12:44875353-44875507|39|14.69|0.69|4.4|-|ENST00000551601|NELL2,NELL2;nc|ENSG00000184613|Q99435-4|NELL2;ENSG00000184613|ENST00000429094|NELL2;nc|ENSG00000184613|Q99435-2|NELL2;nc|ENSG00000184613|Q99435-3|NELL2	ENST00000547751.5_1_12:45059243-45269664:-|nuORF	ENST00000547751.5_1_12:45059243-45269664:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79510498046875	2	491.795269	981.575986	-2.0246	-0.0009957	2.587	0.0012723	0.56235	0.00027656	491.79643169128343	45.478	1.3283	45.474	44.66	45.989	-0.0041618					90	30	4	0	0	0	0.8347	1	3601	3601		23.042	1.0826	1	433340			25008	129	16845	16855	28637	28637					0.08446074267988024
KWHKLSLA	8	Unmodified	_KWHKLSLA_					0	0	0		ENST00000547751.5_1_12:45059243-45269664:-|nuORF;chr12:44875353-44875507|39|14.69|0.69|4.4|-|ENST00000551601|NELL2,NELL2;nc|ENSG00000184613|Q99435-4|NELL2;ENSG00000184613|ENST00000429094|NELL2;nc|ENSG00000184613|Q99435-2|NELL2;nc|ENSG00000184613|Q99435-3|NELL2	ENST00000547751.5_1_12:45059243-45269664:-|nuORF	ENST00000547751.5_1_12:45059243-45269664:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7955017089844	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.81548	1	4194	4194		20.482	1.1219	1	581270			25009	129	16845	16855	28638	28638					0.08446074267988024
KWIGTLVALHQ	11	Unmodified	_KWIGTLVALHQ_					0	0	0			REV__ENST00000467077.1_1_3:142074240-142074312:-|nuORF	REV__ENST00000467077.1_1_3:142074240-142074312:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3689575195312	2	633.371872	1264.72919	-0.11908	-7.5423E-05	-4.0759	-0.0025816	-4.195	-0.002657	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.66929	2	9635	9635;9647		36.447	2.2362	1	2722900	+		25010	27145	16846	16856	28639;28640	28639					0.10741644593804267
KWIHALSK	8	Unmodified	_KWIHALSK_					0	0	0			REV__ENSG00000173846|ENST00000372201|PLK3	REV__ENSG00000173846|ENST00000372201|PLK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.298828125	2	491.795269	981.575986	-1.1119	-0.00054683	2.4388	0.0011994	1.3269	0.00065256	491.79642278746286	73.027	0.75407	73.11	72.701	73.455	0.083138					42	26	2	0	0	0	0.87922	1	6717	6717		31.955	5.1588	1	82376	+		25011	21956	16847	16857	28641	28641					0.08446074267988024
KWIKLLLLII	10	Unmodified	_KWIKLLLLII_					0	0	0			REV__ENST00000594643.1_1_19:48893647-48894615:-|nuORF	REV__ENST00000594643.1_1_19:48893647-48894615:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2981872558594	3	418.296694	1251.86825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.447	1	69.582	69.082	70.082	0.13522								0	0	0	0.45132	1	6281	6281		7.3997	2.7872	1		+		25012	17540	16848	16858	28642	28642					0.2523921422928197
KWIKLLLLII	10	Unmodified	_KWIKLLLLII_					0	0	0			REV__ENST00000594643.1_1_19:48893647-48894615:-|nuORF	REV__ENST00000594643.1_1_19:48893647-48894615:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.297119140625	3	418.296694	1251.86825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.107	1	77.675	77.175	78.175	0.56836								0	0	0	0.45132	1	8798	8798		4.3388	1.1275	1		+		25013	17540	16848	16858	28643	28643					0.2523921422928197
KWILARPAP	9	Unmodified	_KWILARPAP_					0	0	0			REV__ENST00000578411.1_1_17:28120861-28257182:-|nuORF	REV__ENST00000578411.1_1_17:28120861-28257182:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3253784179688	2	526.324194	1050.63383	-1.1167	-0.00058772	2.2537	0.0011862	1.137	0.00059845	526.3252520860087	76.123	0.86795	76.213	75.973	76.841	0.089363					54	30	2	0	0	0	0.77546	1	7089	7089		31.955	9.995	1	85783	+		25014	29025	16849	16859	28644	28644					0.11054336193410563
KWIPIMKR	8	Unmodified	_KWIPIMKR_					0	0	0			REV__ENST00000517609.5_1_8:124429070-124447771:+|nuORF	REV__ENST00000517609.5_1_8:124429070-124447771:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.662353515625	2	536.328422	1070.64229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.139	1	65.265	64.765	65.765	0.12545								0	0	0	0.30252	1	5767	5767		19.36	1.995	1		+		25015	20507	16850	16860	28645	28645					0.10979566838386745
KWIPNIKWSPE	11	Unmodified	_KWIPNIKWSPE_					0	0	0			REV__ENSG00000160753|ENST00000368352|RUSC1	REV__ENSG00000160753|ENST00000368352|RUSC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.5895690917969	3	466.590717	1396.75032	-0.25324	-0.00011816	-2.5189	-0.0011753	-2.7722	-0.0012935	466.58946368707535	55.876	0.53635	56.277	55.991	56.527	0.40101					39	14	4	0	0	0	0.71394	1	5761	5761		29.245	0.66827	1	1529800	+		25016	20737	16851	16861	28646	28646					0.06781609902645869
KWISVHAS	8	Unmodified	_KWISVHAS_					0	0	0			REV__ENSG00000127526|ENST00000595753|SLC35E1	REV__ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25384521484375	2	464.255977	926.497401	-1.1813	-0.00054845	-2.9805	-0.0013837	-4.1619	-0.0019322	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.86288	1	8003	8003		26.796	0	1	946850	+		25017	18737	16852	16862	28647	28647					0.03121221962896925
KWISVHAS	8	Unmodified	_KWISVHAS_					0	0	0			REV__ENSG00000127526|ENST00000595753|SLC35E1	REV__ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2539367675781	2	464.255977	926.497401	-1.597	-0.00074142	-2.6107	-0.001212	-4.2077	-0.0019534	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.884	2	8245	8245;8257		33.516	3.0119	1	1324500	+		25018	18737	16852	16862	28648;28649	28648					0.03121221962896925
KWISVHAS	8	Unmodified	_KWISVHAS_					0	0	0			REV__ENSG00000127526|ENST00000595753|SLC35E1	REV__ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.25408935546875	2	464.255977	926.497401	-0.27289	-0.00012669	-3.7809	-0.0017553	-4.0538	-0.001882	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.90465	1	9754	9754		40.573	1.3198	1	1215000	+		25019	18737	16852	16862	28650	28650					0.03121221962896925
KWIVLAQH	8	Unmodified	_KWIVLAQH_					0	0	0			REV__ENSG00000240720|ENST00000458448|LRRD1	REV__ENSG00000240720|ENST00000458448|LRRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.7947692871094	2	497.795269	993.575986	-1.2593	-0.00062688	2.6686	0.0013284	1.4093	0.00070156	497.79616758279207	48.708	1.9058	48.709	47.99	49.896	0.00017166					121	43	4	0	0	0	0.86288	1	4120	4120		26.796	1.3459	1	500820	+		25020	23814	16853	16863	28651	28651					0.07894074267983342
KWLHAPLGVGN	11	Unmodified	_KWLHAPLGVGN_					0	0	0			REV__ENST00000537992.5_1_7:20370826-20370901:+|nuORF	REV__ENST00000537992.5_1_7:20370826-20370901:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.3329467773438	2	596.33529	1190.65603	-1.3013	-0.00077598	-2.7565	-0.0016438	-4.0577	-0.0024198	596.3335316328556	96.129	3.5172	96.331	95.353	98.87	0.20242					227	81	4	0	0	0	0.60058	1	9804	9804		44.377	9.199	1	1353000	+		25021	28428	16854	16864	28652	28652					0.06832515871178657
KWLRWHRVCTF	11	Unmodified	_KWLRWHRVCTF_					0	0	0			REV__ENSG00000147160|ENST00000276101|AWAT2	REV__ENSG00000147160|ENST00000276101|AWAT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.275634765625	3	511.274957	1530.80304	-1.5943	-0.00081511	2.4315	0.0012432	0.83722	0.00042805	511.27604330299584	38.894	0.7828	38.894	38.597	39.38	0					39	18	3	0	0	0	0.76579	1	2445	2445		18.531	5.0231	1	137710	+		25022	20058	16855	16865	28653	28653					0.058872894844398616
KWLRWHRVCTF	11	Unmodified	_KWLRWHRVCTF_					0	0	0			REV__ENSG00000147160|ENST00000276101|AWAT2	REV__ENSG00000147160|ENST00000276101|AWAT2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	511.274957	1530.80304	0.19808	0.00010127	0.18782	9.603E-05	0.3859	0.0001973	511.2750332852252	39.192	0.49824	39.162	38.941	39.439	-0.030273	0.12992	-0.0022399	NaN	18.531	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54146	+		25023	20058	16855	16865							0.058872894844398616
KWLRWHRVCTF	11	Unmodified	_KWLRWHRVCTF_					0	0	0			REV__ENSG00000147160|ENST00000276101|AWAT2	REV__ENSG00000147160|ENST00000276101|AWAT2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	511.274957	1530.80304	-0.9553	-0.00048842	1.0989	0.00056184	0.1436	7.3417E-05	511.27544122575864	38.993	0.63729	38.946	38.647	39.284	-0.047001	-0.08539	-0.00084242	NaN	18.531	24	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90660	+		25024	20058	16855	16865							0.058872894844398616
KWLRWHRVCTF	11	Unmodified	_KWLRWHRVCTF_					0	0	0			REV__ENSG00000147160|ENST00000276101|AWAT2	REV__ENSG00000147160|ENST00000276101|AWAT2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	511.274957	1530.80304	-1.8543	-0.00094805	2.5122	0.0012844	0.65788	0.00033636	511.2762360103781	38.973	0.62989	38.984	38.673	39.303	0.011173	-0.047866	0.0013253	NaN	18.531	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72209	+		25025	20058	16855	16865							0.058872894844398616
KWLRWHRVCTF	11	Unmodified	_KWLRWHRVCTF_					0	0	0			REV__ENSG00000147160|ENST00000276101|AWAT2	REV__ENSG00000147160|ENST00000276101|AWAT2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	511.274957	1530.80304	-0.44539	-0.00022772	1.0234	0.00052326	0.57805	0.00029554	511.275670917945	39.16	0.57838	39.17	38.882	39.461	0.010704	0.13861	-0.00095816	NaN	18.531	17	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71805	+		25026	20058	16855	16865							0.058872894844398616
KWLRWHRVCTF	11	Unmodified	_KWLRWHRVCTF_					0	0	0			REV__ENSG00000147160|ENST00000276101|AWAT2	REV__ENSG00000147160|ENST00000276101|AWAT2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	511.274957	1530.80304	0.25598	0.00013088	0.78547	0.00040159	1.0415	0.00053247	511.2754107916479	38.946	0.36677	39.034	38.819	39.186	0.088375	0.0026097	-0.0013232	NaN	18.531	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64638	+		25027	20058	16855	16865							0.058872894844398616
KWLTMKLPL	9	Unmodified	_KWLTMKLPL_					0	0	0			REV__chr10:119832096-119836896|17|10.94|0.48|4.51|-|0|None,MCMBP|1	REV__chr10:119832096-119836896|17|10.94|0.48|4.51|-|0|None,MCMBP|1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	565.0117797851562	2	565.343738	1128.67292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.6	1	111.6	111.1	112.1	0								0	0	0	0.34024	1	11604	11604		17.365	3.2278	1		+		25028	15465	16856	16866	28654	28654					0.11373300432774158
KWNNLGLI	8	Unmodified	_KWNNLGLI_					0	0	0			REV__chr2:68047319-68050874|13|16.92|0.0|20.69|-|2|TE_info:L2a,L2a_dup20152,L2,LINE,donor,+,68050874,68051236|C1D,None|10	REV__chr2:68047319-68050874|13|16.92|0.0|20.69|-|2|TE_info:L2a,L2a_dup20152,L2,LINE,donor,+,68050874,68051236|C1D,None|10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774353027344	2	479.279452	956.544351	-0.83761	-0.00040145	-3.5851	-0.0017182	-4.4227	-0.0021197	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.86791	1	7856	7856		28.254	0.37203	1	2142700	+		25029	15764	16857	16867	28655	28655					0.0643408151404401
KWPIFLPDS	9	Unmodified	_KWPIFLPDS_					0	0	0			REV__ENSG00000134452|ENST00000362091|FBH1	REV__ENSG00000134452|ENST00000362091|FBH1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.8046264648438	2	551.800217	1101.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.816	1	40.785	40.285	41.285	-0.030991								0	0	0	0.27974	1	2935	2935		38.806	7.1719	1		+		25030	19143	16858	16868	28656	28656					0.03915217482699518
KWPKFIKGF	9	Unmodified	_KWPKFIKGF_					0	0	0			REV__ENST00000493669.2_1_1:28733953-28817463:+|nuORF	REV__ENST00000493669.2_1_1:28733953-28817463:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8428955078125	2	575.84222	1149.66989	-1.7423	-0.0010033	3.3557	0.0019323	1.6134	0.00092905	575.8440322234329	89.414	1.3384	89.884	88.876	90.214	0.47068					71	32	3	0	0	0	0.7932	1	10574	10574		24.203	1.1603	1	615790	+		25031	23463	16859	16869	28657	28657					0.10103793370262792
KWPSCNQHSH	10	Unmodified	_KWPSCNQHSH_					0	0	0			REV__ENST00000496112.5_1_7:44251862-44252006:+|nuORF	REV__ENST00000496112.5_1_7:44251862-44252006:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.7412109375	3	408.517335	1222.53017	1.554	0.00063484	1.7202	0.00070272	3.2742	0.0013376	408.51807897349266	24.268	0.47419	23.754	23.494	23.968	-0.51365					17	10	2	0	0	0	0.37624	1	1137	1137		20.03	5.3368	1	56073	+		25032	27746	16860	16870	28658	28658					-0.07218938976552636
KWPSCNQHSH	10	Unmodified	_KWPSCNQHSH_					0	0	0			REV__ENST00000496112.5_1_7:44251862-44252006:+|nuORF	REV__ENST00000496112.5_1_7:44251862-44252006:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	408.517335	1222.53017	1.4573	0.00059532	2.3842	0.00097401	3.8415	0.0015693	408.5180955439241	24.303	0.44658	23.921	23.75	24.197	-0.38178	0.083637	0.00043075	NaN	14.694	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40302	+		25033	27746	16860	16870							-0.07218938976552636
KWPSSQQY	8	Unmodified	_KWPSSQQY_					0	0	0		ENSG00000124177|ENST00000373233|CHD6	ENSG00000124177|ENST00000373233|CHD6	ENSG00000124177|ENST00000373233|CHD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2479858398438	2	512.248349	1022.48214	-0.32564	-0.00016681	0.16134	8.2644E-05	-0.1643	-8.4165E-05	512.2480644900422	46.774	0.642	46.77	46.449	47.091	-0.0041618					29	15	3	0	0	0	0.67263	1	3799	3799		68.485	2.6815	1	173890			25034	3311	16861	16871	28659	28659					-0.02819689624948296
KWPVKVFIF	9	Unmodified	_KWPVKVFIF_					0	0	0			REV__ENST00000336216.8_1_15:77713046-77713202:+|nuORF	REV__ENST00000336216.8_1_15:77713046-77713202:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.35498046875	2	582.35242	1162.69029	0.16989	9.8934E-05	1.8651	0.0010862	2.035	0.0011851	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.7932	1	12386	12386		25.45	2.4077	1	635410	+		25035	25183	16862	16872	28660	28660					0.11544964030076699
KWPVSFWR	8	Unmodified	_KWPVSFWR_					0	0	0			REV__ENSG00000205667|ENST00000381130|ARSH	REV__ENSG00000205667|ENST00000381130|ARSH	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.7325439453125	2	553.300719	1104.58688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.737	1	75.737	75.237	76.237	0								0	0	0	0.29755	1	6873	6873		24.203	1.1603	1		+		25036	23569	16863	16873	28661	28661					0.0387747664226481
KWRKHLRILI	10	Unmodified	_KWRKHLRILI_					0	0	0		ENST00000524021.1_1_8:33310907-33318970:-|nuORF;ENST00000518672.5_1_8:33310907-33319160:-|nuORF	ENST00000524021.1_1_8:33310907-33318970:-|nuORF	ENST00000524021.1_1_8:33310907-33318970:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.96734619140625	3	454.966341	1361.87719	-0.85763	-0.00039019	1.9916	0.00090613	1.134	0.00051594	454.96706899495365	41.367	1.3426	41.373	40.948	42.29	0.0065727					90	33	4	0	0	0	0.90594	1	3081	3081		8.2351	1.9142	1	458770			25037	13119	16864	16874	28662	28662					0.2107300063830735
KWRNVRGH	8	Unmodified	_KWRNVRGH_					0	0	0		nc|ENSG00000166548|O00142-2|TK2;nc|ENSG00000166548|O00142-3|TK2;ENSG00000166548|ENST00000544898|TK2;nc|ENSG00000166548|O00142-6|TK2	nc|ENSG00000166548|O00142-2|TK2	nc|ENSG00000166548|O00142-2|TK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.8070678710938	2	526.796666	1051.57878	0.38089	0.00020065	-1.3079	-0.00068897	-0.92697	-0.00048832	526.7958101307116	18.694	0.42853	18.072	17.813	18.241	-0.62141					12	9	2	0	0	0	0.4196	1	403	403		42.474	12.633	1	39401			25038	6207	16865	16875	28663	28663					0.05505342445530914
KWRPQLLVAP	10	Unmodified	_KWRPQLLVAP_					0	0	0			REV__nc|ENSG00000172534|P51610-2|HCFC1	REV__nc|ENSG00000172534|P51610-2|HCFC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3670654296875	2	604.369133	1206.72371	-1.2751	-0.0007706	-3.1235	-0.0018878	-4.3986	-0.0026584	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.86305	1	11228	11228		31.955	1.6371	1	103250000	+		25039	21840	16866	16876	28664	28664					0.12861965801971564
KWRRLKVKPR	10	Unmodified	_KWRRLKVKPR_					0	0	0			REV__nc|ENSG00000065665|Q9H9S3-2|SEC61A2	REV__nc|ENSG00000065665|Q9H9S3-2|SEC61A2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2633361816406	3	456.301724	1365.88334	-1.4515	-0.00066233	-0.42329	-0.00019315	-1.8748	-0.00085548	456.30177186678725	79.363	0.17426	79.461	79.317	79.492	0.098701					6	5	2	0	0	0	0.37624	1	7476	7476		14.694	5.4819	1	43839	+		25040	29700	16867	16877	28665	28665					0.21503518869803884
KWSLPVPR	8	Unmodified	_KWSLPVPR_					0	0	0			REV__ENST00000468303.5_1_1:24742482-24742845:-|nuORF	REV__ENST00000468303.5_1_1:24742482-24742845:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79571533203125	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.8347	1	3821	3821		23.042	1.0826	1	1346800	+		25041	27181	16868	16878	28666	28666					0.08446074267999393
KWSVPGGGSK	10	Unmodified	_KWSVPGGGSK_					0	0	0		ENST00000403105.1_1_6:70415475-70415688:-|nuORF	ENST00000403105.1_1_6:70415475-70415688:-|nuORF	ENST00000403105.1_1_6:70415475-70415688:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.7733154296875	2	501.771991	1001.52943	-0.052677	-2.6432E-05	3.4284	0.0017203	3.3757	0.0016938	501.77355964208687	25.284	1.1814	24.955	24.43	25.611	-0.32825					56	26	3	0	0	0	0.36572	1	1271	1271		66.962	1.4965	1	629600			25042	11249	16869	16879	28667	28667					0.028725896460628064
KWTKQWYLCMK	11	Unmodified	_KWTKQWYLCMK_					0	0	0			REV__ENST00000261396.5_1_1:229622146-229622245:-|nuORF	REV__ENST00000261396.5_1_1:229622146-229622245:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.922119140625	3	505.593076	1513.7574	-1.5078	-0.00076233	-2.1017	-0.0010626	-3.6095	-0.0018249	505.59195223003945	63.693	0.58095	63.72	63.41	63.991	0.027142					61	20	4	0	0	0	0.76892	1	5956	5956		17.833	1.9125	1	352390	+		25043	24386	16870	16880	28668	28668					0.021068831872071314
KWTKYKGAFA	10	Unmodified	_KWTKYKGAFA_					0	0	0			REV__ENSG00000122863|ENST00000373115|CHST3	REV__ENSG00000122863|ENST00000373115|CHST3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.5586242675781	3	400.557236	1198.64988	0.91168	0.00036518	2.2731	0.00091051	3.1848	0.0012757	400.5580759097414	19.227	0.64959	19.301	19.049	19.698	0.073463					57	20	4	0	0	0	0.84112	1	376	376		27.047	0	1	362530	+		25044	18518	16871	16881	28669	28669					0.05849997639666071
KWTRHQRRTKP	11	Unmodified	_KWTRHQRRTKP_					0	0	0			REV__ENST00000257749.8_2_6:90718571-90798726:-|nuORF	REV__ENST00000257749.8_2_6:90718571-90798726:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.6247253417969	3	498.623525	1492.84875	0.89929	0.00044841	-1.7944	-0.00089471	-0.89507	-0.0004463	498.62268617728625	21.451	1.1498	21.519	20.917	22.067	0.068251					65	41	2	0	0	0	0.79224	1	564	564		12.957	3.3113	1	54885	+		25045	24346	16872	16882	28670	28670					0.12203650991045834
KWTRPVLP	8	Unmodified	_KWTRPVLP_					0	0	0		ENSG00000135929|ENST00000258415|CYP27A1;ENST00000494263.5_1_2:219646839-219678911:+|nuORF;ENST00000466602.1_1_2:219677084-219677513:+|nuORF	ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.8034973144531	2	498.803094	995.591636	-1.4653	-0.00073091	2.6111	0.0013024	1.1457	0.00057149	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.87479	1	4253	4253		30.504	2.2494	1	2964600			25046	4071	16873	16883	28671	28671					0.09366360785031702
KWVEKVGK	8	Unmodified	_KWVEKVGK_					0	0	0			REV__ENST00000479790.2_1_13:22067390-22069479:-|nuORF	REV__ENST00000479790.2_1_13:22067390-22069479:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.2930603027344	2	487.295102	972.575651	0.071868	3.5021E-05	-4.2093	-0.0020512	-4.1374	-0.0020161	487.2929485266333	21.072	1.5372	21.148	20.502	22.039	0.075848					159	76	4	0	0	0	0.20947	1	559	559		108.09	5.3142	1	2578500	+		25047	21186	16874	16884	28672	28672					0.08826654548136048
KWVKLRKNHS	10	Unmodified	_KWVKLRKNHS_					0	0	0		ENST00000479555.1_1_3:99885204-99890767:+|nuORF;nc|ENSG00000184220|Q9BQ75-2|CMSS1;ENSG00000184220|ENST00000421999|CMSS1	ENST00000479555.1_1_3:99885204-99890767:+|nuORF	ENST00000479555.1_1_3:99885204-99890767:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.59765625	3	432.594684	1294.76222	2.718	0.0011758	4.0817	0.0017657	6.7997	0.0029415	432.59643721162763	106.42	1.1232	106.39	105.97	107.1	-0.036613					90	25	5	0	0	0	0.85259	1	11793	11793		20.03	0.7678	1	14662000			25048	7593	16875	16885	28673	28673					0.12663271436531431
KWVLTAKH	8	Unmodified	_KWVLTAKH_					0	0	0			REV__nc|ENSG00000124496|Q96PN7-3|TRERF1	REV__nc|ENSG00000124496|Q96PN7-3|TRERF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956848144531	2	491.795269	981.575986	0.29464	0.0001449	0.55726	0.00027406	0.8519	0.00041896	491.7954245147593	45.248	1.2335	45.291	44.693	45.927	0.042599					75	30	3	0	0	0	0.87064	1	3222	3222		29.15	10.825	1	440250	+		25049	18591	16876	16886	28674	28674					0.08446074267976655
KWVLTAKH	8	Unmodified	_KWVLTAKH_					0	0	0			REV__nc|ENSG00000124496|Q96PN7-3|TRERF1	REV__nc|ENSG00000124496|Q96PN7-3|TRERF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.2989501953125	2	491.795269	981.575986	-0.95582	-0.00047007	1.6941	0.00083313	0.73824	0.00036307	491.79612787684647	68.727	0.97743	68.792	68.154	69.131	0.065514					60	39	2	0	0	0	0.87479	1	6204	6204		30.504	5.0535	1	97450	+		25050	18591	16876	16886	28675	28675					0.08446074267976655
KWVRHPLL	8	Unmodified	_KWVRHPLL_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2;REV__ENST00000566635.5_1_15:28356911-28362639:-|nuORF	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.827392578125	2	524.824361	1047.63417	1.241	0.00065132	4.3445	0.0022801	5.5855	0.0029314	524.8265446316465	102.17	1.0632	102.22	101.85	102.91	0.04319					53	25	3	0	0	0	0.86791	1	11057	11057		28.254	3.7351	1	396530	+		25051	18791;28872	16877	16887	28676	28676					0.1122575591327859
KWWRWFQKWSM	11	Unmodified	_KWWRWFQKWSM_					0	0	0			REV__chr12:54283607-54283812|15|923.87|0.0|26.46|+|1|None,HNRNPA1|2	REV__chr12:54283607-54283812|15|923.87|0.0|26.46|+|1|None,HNRNPA1|2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.92242431640625	4	417.961866	1667.81836	3.1793	0.0013288	-1.1706	-0.00048928	2.0087	0.00083956	417.9616451946138	105.45	0.20576	105.49	105.38	105.59	0.038322					5	4	2	0	0	0	0.18238	1	11526	11526		5.6988	4.5505	1	38248	+		25052	15548	16878	16888	28677	28677					0.011161562816369042
KWYLKKLVF	9	Unmodified	_KWYLKKLVF_					0	0	0		ENSG00000174992|ENST00000400752|ZG16	ENSG00000174992|ENST00000400752|ZG16	ENSG00000174992|ENST00000400752|ZG16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.9220886230469	3	408.921627	1223.74305	-0.18603	-7.607E-05	1.8518	0.00075725	1.6658	0.00068118	408.9223182552884	104.73	3.6152	104.72	103.66	107.27	-0.014809					241	85	5	0	0	0	0.7932	1	11345	11345		19.104	8.0068	1	2991100			25053	6981	16879	16889	28678	28678					0.14012922092865665
KWYLKKLVF	9	Unmodified	_KWYLKKLVF_					0	0	0		ENSG00000174992|ENST00000400752|ZG16	ENSG00000174992|ENST00000400752|ZG16	ENSG00000174992|ENST00000400752|ZG16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.87939453125	2	612.878802	1223.74305	0.28933	0.00017733	0.98075	0.00060108	1.2701	0.00077841	612.8792234651027	104.57	3.8669	104.61	104	107.87	0.039864					305	91	6	0	0	0	0.7932	1	11375	11375		26.796	0.10319	1	50996000			25054	6981	16879	16889	28679	28679					0.14012922092865665
KWYLWRKKWDP	11	Unmodified	_KWYLWRKKWDP_					0	0	0			REV__nc|ENSG00000198836|O60313-13|OPA1	REV__nc|ENSG00000198836|O60313-13|OPA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2882080078125	3	535.961144	1604.8616	-2.0459	-0.0010965	-4.3688	-0.0023415	-6.4148	-0.0034381	535.9587639371827	41.984	0.99572	42.681	42.344	43.339	0.69754					63	24	4	0	0	0	0.79224	1	3717	3717		12.957	2.8536	1	1892600	+		25055	23391	16880	16890	28680	28680					0.08336669330560653
KYAPKPPTEDT	11	Unmodified	_KYAPKPPTEDT_					0	0	0		nc|ENSG00000140873|Q8TE60-2|ADAMTS18;ENSG00000140873|ENST00000282849|ADAMTS18	nc|ENSG00000140873|Q8TE60-2|ADAMTS18	nc|ENSG00000140873|Q8TE60-2|ADAMTS18	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.8129272460938	2	623.819335	1245.62412	-1.1218	-0.00069983	-2.1819	-0.0013611	-3.3038	-0.002061	623.8180695967625	30.788	0.5233	30.788	30.515	31.038	0					27	18	2	0	0	0	0.70737	1	1428	1428		30.318	0	1	47391			25056	4463	16881	16891	28681	28681					0.011130586067110926
KYAWVEKY	8	Unmodified	_KYAWVEKY_					0	0	0		ENST00000483704.5_1_17:17207728-17250258:+|nuORF;ENSG00000205309|ENST00000389022|NT5M	ENST00000483704.5_1_17:17207728-17250258:+|nuORF	ENST00000483704.5_1_17:17207728-17250258:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.7788696289062	2	543.784567	1085.55458	-0.9073	-0.00049338	-3.8929	-0.0021169	-4.8002	-0.0026103	543.7821288685951	32.032	0.89849	32.158	31.604	32.503	0.12643					50	20	3	0	0	0	0.91472	1	2218	2218		44.117	1.7207	1	344460			25057	8524	16882	16892	28682	28682					0.01522644448596111
KYCKVLRLP	9	Unmodified	_KYCKVLRLP_					0	0	0		ENSG00000136878|ENST00000372429|USP20	ENSG00000136878|ENST00000372429|USP20	ENSG00000136878|ENST00000372429|USP20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3409423828125	2	560.338987	1118.66342	3.1454	0.0017625	-0.73406	-0.00041132	2.4113	0.0013512	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.7932	1	13128	13128		19.36	1.995	1	151040			25058	4151	16883	16893	28683	28683					0.10883532147249753
KYCVSLAIY	9	Unmodified	_KYCVSLAIY_					0	0	0			REV__ENST00000494026.1_1_14:105915673-105921005:+|nuORF	REV__ENST00000494026.1_1_14:105915673-105921005:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2803955078125	2	530.280803	1058.54705	0.45501	0.00024128	-1.1681	-0.00061941	-0.71307	-0.00037813	530.2806991102823	58.965	0.78107	59.079	58.607	59.388	0.11396					65	30	3	0	0	0	0.76764	1	5060	5060		34.173	1.3601	1	246380	+		25059	27708	16884	16894	28684	28684					0.020121688566632656
KYGRKIIVFS	10	Unmodified	_KYGRKIIVFS_					0	0	0		ENSG00000175220|ENST00000311956|ARHGAP1;ENST00000529960.5_1_11:46709721-46722147:-|nuORF	ENSG00000175220|ENST00000311956|ARHGAP1	ENSG00000175220|ENST00000311956|ARHGAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.872314453125	2	605.868966	1209.72338	2.1215	0.0012854	3.5656	0.0021603	5.6871	0.0034456	605.870912508801	99.925	1.6378	100.29	99.878	101.52	0.36292					110	40	4	0	0	0	0.85958	1	12099	12099		15.642	1.5047	1	1159400			25060	6999	16885	16895	28685	28685					0.12690546082126275
KYHKKKHKLLR	11	Unmodified	_KYHKKKHKLLR_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.6489562988281	3	493.652533	1477.93577	-1.933	-0.00095422	-4.2739	-0.0021098	-6.2069	-0.003064	493.6503528777543	42.447	1.0166	42.881	42.485	43.502	0.4334					81	24	4	0	0	0	0.79224	1	3827	3827		12.957	3.7457	1	1368700			25061	2924	16886	16896	28686	28686					0.21592057212774307
KYIYFLIKI	9	Unmodified	_KYIYFLIKI_					0	0	0		ENSG00000065615|ENST00000369681|CYB5R4	ENSG00000065615|ENST00000369681|CYB5R4	ENSG00000065615|ENST00000369681|CYB5R4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	600.8681640625	2	600.873185	1199.73182	1.0678	0.00064159	1.5043	0.00090389	2.572	0.0015455	600.8741231094659	15.853	0.27439	15.363	15.255	15.529	-0.48917					7	5	2	0	0	0	0.77696	1	67	67		31.955	2.7848	1	103820			25062	1135	16887	16897	28687	28687					0.1399409999874024
KYKRVFSV	8	Unmodified	_KYKRVFSV_					0	0	0		ENSG00000138246|ENST00000260818|DNAJC13	ENSG00000138246|ENST00000260818|DNAJC13	ENSG00000138246|ENST00000260818|DNAJC13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8087158203125	2	513.808377	1025.6022	-0.47161	-0.00024232	1.6041	0.00082419	1.1325	0.00058187	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.85277	1	4007	4007		25.45	1.2474	1	1552900			25063	4283	16888	16898	28688	28688					0.09042343439477918
KYLALIGP	8	Unmodified	_KYLALIGP_					0	0	0			REV__nc|ENSG00000179832|Q8NDA8-5|MROH1	REV__nc|ENSG00000179832|Q8NDA8-5|MROH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.771240234375	2	437.773471	873.53239	-1.5883	-0.00069529	-3.2181	-0.0014088	-4.8063	-0.0021041	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.86791	1	2313	2313		28.254	1.4582	1	1227500	+		25064	22358	16889	16899	28689	28689					0.0905646477085611
KYLHQTRKK	9	Unmodified	_KYLHQTRKK_					0	0	0		L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|57|2|sense	L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|57|2|sense	L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|57|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.244873046875	3	401.243652	1200.70913	2.0284	0.00081388	1.183	0.00047469	3.2114	0.0012886	401.24405132963193	20.855	0.89152	20.395	20.053	20.945	-0.4591					60	20	5	0	0	0	0.54908	1	711	711		49.536	1.5765	1	593280			25065	14544	16890	16900	28690	28690					0.11679893653808904
KYMDVQFDF	9	Unmodified	_KYMDVQFDF_					0	0	0		nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C;ENSG00000197879|ENST00000648651|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.2699584960938	2	596.7708	1191.52705	-0.1354	-8.0801E-05	1.6498	0.00098457	1.5144	0.00090377	596.771375435627	73.566	0.4952	74.12	73.999	74.494	0.55386					18	12	2	0	0	0	0.41984	1	8302	8302		56.434	0.92959	1	380050			25066	8208	16891	16901	28691	28691					-0.06105626873932124
KYNHILKP	8	Unmodified	_KYNHILKP_					0	0	0		ENST00000486520.1_1_21:48078635-48080886:+|nuORF;ENST00000482508.5_1_21:48063482-48080886:+|nuORF;ENSG00000160310|ENST00000355680|PRMT2	ENST00000486520.1_1_21:48078635-48080886:+|nuORF	ENST00000486520.1_1_21:48078635-48080886:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7989501953125	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.109	1	51.085	50.585	51.585	-0.02343								0	0	0	0.29498	1	4455	4455		26.796	1.3459	1				25067	5579	16892	16902	28692	28692					0.08122056922422871
KYNPSDVI	8	Unmodified	_KYNPSDVI_					0	0	0			REV__ENSG00000196090|ENST00000373187|PTPRT	REV__ENSG00000196090|ENST00000373187|PTPRT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.243896484375	2	468.245275	934.475997	0.29201	0.00013673	-0.21451	-0.00010045	0.0775	3.6289E-05	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.85277	1	3664	3664		25.45	0	1	7645500	+		25068	23087	16893	16903	28693	28693					0.006137921435083626
KYPKERSHIR	10	Unmodified	_KYPKERSHIR_					0	0	0			REV__ENSG00000197472|ENST00000339986|ZNF695	REV__ENSG00000197472|ENST00000339986|ZNF695	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.5863342285156	3	438.586077	1312.7364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.723	1	32.723	32.223	33.223	0								0	0	0	0.45132	1	1647	1647		18.531	0	1		+		25069	23236	16894	16904	28694	28694					0.09254377194224617
KYPKKGSH	8	Unmodified	_KYPKKGSH_					0	0	0			REV__nc|ENSG00000170954|Q09FC8-3|ZNF415	REV__nc|ENSG00000170954|Q09FC8-3|ZNF415	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.76708984375	2	472.769252	943.52395	-0.10807	-5.1094E-05	-4.0843	-0.0019309	-4.1924	-0.001982	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.89494	1	8291	8291		37.159	1.9584	1	501240	+		25070	21706	16895	16905	28695	28695					0.04992910854230104
KYRRRVVYMRW	11	Unmodified	_KYRRRVVYMRW_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3035278320312	3	538.305028	1611.89325	-0.51611	-0.00027783	1.6695	0.00089871	1.1534	0.00062088	538.6402087951344	109.81	1.5286	109.81	109.6	111.13	0					119	56	3	0	0	0	0.80813	3	11429	11417;11429;11459		9.6461	3.3253	1	318350	+		25071	23243	16896	16906	28696;28697;28698	28697					0.11178338812896982
KYRRRVVYMRW	11	Unmodified	_KYRRRVVYMRW_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3068237304688	3	538.305028	1611.89325	3.5626	0.0019178	-2.5852	-0.0013916	0.97735	0.00052611	538.3036154864011	110.09	1.3352	110.06	109.77	111.11	-0.027641					122	44	4	0	0	0	0.76579	2	12179	12179;12210		18.531	12.53	1	461650	+		25072	23243	16896	16906	28699;28700	28699					0.11178338812896982
KYRRRVVYMRW	11	Unmodified	_KYRRRVVYMRW_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.6393432617188	3	538.305028	1611.89325	1.2455	0.00067047	-0.42369	-0.00022807	0.82184	0.0004424	538.3047341501328	109.96	1.3308	109.99	109.73	111.06	0.033096					84	48	2	0	0	0	0.84494	2	12050	12050;12124		6.3209	3.1096	1	535530	+		25073	23243	16896	16906	28701;28702	28701					0.11178338812896982
KYRRRVVYMRW	11	Unmodified	_KYRRRVVYMRW_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3052368164062	3	538.305028	1611.89325	0.84006	0.00045221	-0.12659	-6.8146E-05	0.71347	0.00038406	538.3048488813716	110.52	0.8345	110.6	110.08	110.92	0.073685					49	23	3	0	0	0	0.7896	2	11848	11848;11894		13.508	10.099	1	329000	+		25074	23243	16896	16906	28703;28704	28703					0.11178338812896982
KYRRRVVYMRW	11	Unmodified	_KYRRRVVYMRW_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3051147460938	3	538.305028	1611.89325	-1.4902	-0.00080218	2.3468	0.0012633	0.85658	0.0004611	538.3061488564512	110.54	0.85041	110.54	110.07	110.92	-0.0074387					67	26	4	0	0	0	0.8498	1	11810	11810		6.001	2.7897	1	283890	+		25075	23243	16896	16906	28705	28705					0.11178338812896982
KYRRRVVYMRW	11	Unmodified	_KYRRRVVYMRW_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	538.305028	1611.89325	0.83979	0.00045206	0.32941	0.00017732	1.1692	0.00062939	538.305196664957	109.88	0.26198	109.96	109.8	110.06	0.078552	-0.011514	0.0017846	NaN	18.531	14	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	516090	+		25076	23243	16896	16906							0.11178338812896982
KYRRRVVYMRW	11	Unmodified	_KYRRRVVYMRW_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	538.305028	1611.89325	5.0532	0.0027202	-3.6982	-0.0019908	1.355	0.0007294	538.6371355244551	109.95	0.11735	110.02	109.94	110.05	0.068001	0.053584	-0.0047197	NaN	18.531	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	205470	+		25077	23243	16896	16906							0.11178338812896982
KYRRWRQWLGR	11	Unmodified	_KYRRWRQWLGR_					0	0	0			REV__nc|ENSG00000155542|Q8NE22-2|SETD9	REV__nc|ENSG00000155542|Q8NE22-2|SETD9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7816162109375	3	535.639287	1603.89603	0.70539	0.00037783	2.4309	0.0013021	3.1363	0.0016799	535.6404350567865	22.603	0.48759	22.184	21.924	22.412	-0.41879					16	10	2	0	0	0	0.18304	1	928	928		6.3209	0.31984	1	42245	+		25078	20432	16897	16907	28706	28706					0.11823930262062277
KYRVIAFITP	10	Unmodified	_KYRVIAFITP_					0	0	0			REV__nc|ENSG00000188869|Q7Z5M5-2|TMC3	REV__nc|ENSG00000188869|Q7Z5M5-2|TMC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.2470703125	3	403.24477	1206.71248	2.9965	0.0012083	2.319	0.00093511	5.3155	0.0021434	403.2459676680147	104.3	1.9938	104.48	103.68	105.68	0.18887					128	50	4	0	0	0	0.86698	1	12690	12690		28.081	1.0342	1	496390	+		25079	23038	16898	16908	28707	28707					0.11739143707836774
KYRYLLEQAV	10	Unmodified	_KYRYLLEQAV_					0	0	0			REV__ENST00000475188.1_1_7:130137788-130138338:+|nuORF	REV__ENST00000475188.1_1_7:130137788-130138338:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3624267578125	2	641.861338	1281.70812	1.706	0.001095	-4.3678	-0.0028035	-2.6617	-0.0017085	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.80179	1	12807	12807		39.253	7.723	1	27133000	+		25080	15899	16899	16909	28708	28708					0.0785363449426768
KYSCRTYKR	9	Unmodified	_KYSCRTYKR_					0	0	0		ENST00000534664.1_1_14:20824085-20824774:+|nuORF	ENST00000534664.1_1_14:20824085-20824774:+|nuORF	ENST00000534664.1_1_14:20824085-20824774:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	603.7606811523438	2	602.816407	1203.61826	1.0207	0.00061531	-1.9866	-0.0011975	-0.96584	-0.00058223	602.8154424202987	112.18	0.092255	112.28	112.2	112.29	0.10638					4	2	2	0	0	0	0.20789	1	12079	12079		15.642	1.5047	1	587800			25081	13413	16900	16910	28709	28709					0.024596816140501687
KYSELIKKSK	10	Unmodified	_KYSELIKKSK_					0	0	0		ENSG00000234828|ENST00000636793|IQCM	ENSG00000234828|ENST00000636793|IQCM	ENSG00000234828|ENST00000636793|IQCM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.5840759277344	3	408.583451	1222.72852	1.3583	0.00055498	0.17962	7.3388E-05	1.5379	0.00062837	408.58343909999354	25.141	0.70901	24.813	24.521	25.23	-0.32825					45	15	4	0	0	0	0.76692	1	1266	1266		41.109	3.5091	1	443010			25082	8747	16901	16911	28710	28710					0.12606805154086942
KYTKTVFIQ	9	Unmodified	_KYTKTVFIQ_					0	0	0		nc|ENSG00000120500|P36575-2|ARR3;ENSG00000120500|ENST00000307959|ARR3	nc|ENSG00000120500|P36575-2|ARR3	nc|ENSG00000120500|P36575-2|ARR3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.2840576171875	2	564.326599	1126.63865	0.0099102	5.5926E-06	0.5568	0.00031422	0.56671	0.00031981	564.327136455448	64.303	0.88472	64.689	64.308	65.193	0.3868					36	20	3	0	0	0	0.20789	1	6955	6955		47.96	16.43	1	122970			25083	3133	16902	16912	28711	28711					0.08039175545513899
KYTKTVFIQ	9	Unmodified	_KYTKTVFIQ_					0	0	0		nc|ENSG00000120500|P36575-2|ARR3;ENSG00000120500|ENST00000307959|ARR3	nc|ENSG00000120500|P36575-2|ARR3	nc|ENSG00000120500|P36575-2|ARR3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	564.326599	1126.63865	0.67511	0.00038098	-2.0978	-0.0011839	-1.4227	-0.00080288	564.323910228087	64.253	0.93565	64.807	64.088	65.024	0.55386	0.058736	-0.0022367	NaN	47.96	38	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122690			25084	3133	16902	16912							0.08039175545513899
KYVQDLVKE	9	Unmodified	_KYVQDLVKE_					0	0	0			REV__ENSG00000198753|ENST00000361971|PLXNB3	REV__ENSG00000198753|ENST00000361971|PLXNB3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3116455078125	2	561.313689	1120.61282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.158	1	58.712	58.212	59.212	0.55323								0	0	0	0.33576	1	6096	6096		45.972	8.1607	1		+		25085	23374	16903	16913	28712	28712					0.05734281303261923
KYYVNKGMIE	10	Unmodified	_KYYVNKGMIE_					0	0	0			REV__nc|ENSG00000188655|P60153|RNASE9	REV__nc|ENSG00000188655|P60153|RNASE9	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.8211669921875	2	622.820824	1243.62709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.164	1	53.16	52.66	53.66	-0.0033035								0	0	0	0.45132	1	4634	4634		31.53	3.6476	1		+		25086	23021	16904	16914	28713	28713					0.015026104598518941
LAAAAGRLGGG	11	Unmodified	_LAAAAGRLGGG_					0	0	0			REV__ENST00000332438.4_1_17:40831559-40832345:-|nuORF	REV__ENST00000332438.4_1_17:40831559-40832345:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2617492675781	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.68378	1	7432	7432		34.173	6.2903	1	1262800	+		25087	25139	16905	16915	28714	28714					0.05435722848858404
LAAAARRGG	9	Unmodified	_LAAAARRGG_					0	0	0			REV__ENST00000471007.1_1_20:32078015-32194768:+|nuORF	REV__ENST00000471007.1_1_20:32078015-32194768:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7524108886719	2	421.751393	841.488233	-0.10002	-4.2183E-05	0.32598	0.00013748	0.22596	9.5298E-05	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.78058	1	7638	7638		30.504	1.3541	1	579450	+		25088	27224	16906	16916	28715	28715					0.061148733972345326
LAAAASAAGLP	11	Unmodified	_LAAAASAAGLP_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3016052246094	2	456.761092	911.507631	-0.64066	-0.00029263	-0.97839	-0.00044689	-1.6191	-0.00073952	456.76055655112265	43.247	0.43395	43.247	42.981	43.414	0.00016785					15	9	2	0	0	0	0.16498	1	3303	3303		26.693	11.828	1	68800	+		25089	20385;29943	16907	16917	28716	28716					0.04833784897471105
LAAAEEESK	9	Unmodified	_LAAAEEESK_					0	0	0			REV__ENST00000533372.1_1_12:49976813-49999059:-|nuORF	REV__ENST00000533372.1_1_12:49976813-49999059:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2817077636719	2	474.237647	946.460741	0.45442	0.0002155	-2.385	-0.001131	-1.9306	-0.00091554	474.23787828289545	55.562	0.62315	55.963	55.656	56.279	0.40101					22	14	3	0	0	0	0.20789	1	5670	5670		56.721	5.3856	1	158540	+		25090	28343	16908	16918	28717	28717					-0.014631194443268214
LAAAFAVSRL	10	Unmodified	_LAAAFAVSRL_					0	0	0		nc|ENSG00000138029|P55084-2|HADHB;ENSG00000138029|ENST00000317799|HADHB	nc|ENSG00000138029|P55084-2|HADHB	nc|ENSG00000138029|P55084-2|HADHB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8036804199219	2	509.805834	1017.59712	-1.4574	-0.000743	-2.7703	-0.0014123	-4.2277	-0.0021553	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.86348	1	8261	8261		31.53	6.0796	1	920080			25091	4256	16909	16919	28718	28718					0.08902039576844345
LAAAGLLGLL	10	Unmodified	_LAAAGLLGLL_					0	0	0			REV__ENSG00000197635|ENST00000360534|DPP4	REV__ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30072021484375	2	456.299853	910.585153	-1.7707	-0.00080797	4.1491	0.0018932	2.3784	0.0010852	456.3016315256623	46.489	1.398	46.489	46.06	47.458	0					92	40	3	0	0	0	0.70264	1	3518	3518		44.531	9.3304	1	435240	+		25092	23254	16910	16920	28719	28719					0.1262842283365444
LAAAGLLGLL	10	Unmodified	_LAAAGLLGLL_					0	0	0			REV__ENSG00000197635|ENST00000360534|DPP4	REV__ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3008728027344	2	456.299853	910.585153	0.11809	5.3885E-05	2.2455	0.0010246	2.3636	0.0010785	456.3007564830729	46.759	1.8735	46.745	45.791	47.665	-0.013821					101	50	3	0	0	0	0.86786	1	3785	3785		26.796	0.10319	1	299420	+		25093	23254	16910	16920	28720	28720					0.1262842283365444
LAAAGLLGLL	10	Unmodified	_LAAAGLLGLL_					0	0	0			REV__ENSG00000197635|ENST00000360534|DPP4	REV__ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3012390136719	2	456.299853	910.585153	-1.267	-0.00057813	4.2907	0.0019578	3.0237	0.0013797	456.3016565043114	33.346	1.5471	33.392	33.095	34.642	0.045853					160	67	4	0	0	0	0.86786	1	1635	1635		26.796	2.2921	1	1558600	+		25094	23254	16910	16920	28721	28721					0.1262842283365444
LAAAGLLGLL	10	Unmodified	_LAAAGLLGLL_					0	0	0			REV__ENSG00000197635|ENST00000360534|DPP4	REV__ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3009948730469	2	456.299853	910.585153	0.25824	0.00011784	2.0816	0.00094982	2.3398	0.0010677	456.3006554004226	45.028	1.9814	45.077	44.089	46.07	0.048996					97	49	3	0	0	0	0.70264	1	3246	3246		44.531	9.3304	1	456360	+		25095	23254	16910	16920	28722	28722					0.1262842283365444
LAAAGLLGLL	10	Unmodified	_LAAAGLLGLL_					0	0	0			REV__ENSG00000197635|ENST00000360534|DPP4	REV__ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3013000488281	2	456.299853	910.585153	0.18552	8.4654E-05	2.8375	0.0012948	3.0231	0.0013794	456.3010022539405	33.29	1.7406	33.257	32.935	34.675	-0.032681					212	75	4	0	0	0	0.85976	1	1606	1606		35.201	3.2459	1	1700700	+		25096	23254	16910	16920	28723	28723					0.1262842283365444
LAAALCPWL	9	Unmodified	_LAAALCPWL_					0	0	0			REV__ENST00000470861.1_1_9:139571827-139581809:-|nuORF	REV__ENST00000470861.1_1_9:139571827-139581809:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2773742675781	2	479.264956	956.515359	-0.83507	-0.00040022	0.44134	0.00021152	-0.39373	-0.0001887	479.26530035653246	84.612	0.25874	84.788	84.574	84.833	0.17561					6	5	2	0	0	0	0.20789	1	8236	8236		39.021	24.357	1	47072	+		25097	21594	16911	16921	28724	28724					0.03536220893374775
LAAANLSVDTT	11	Unmodified	_LAAANLSVDTT_					0	0	0		ENSG00000154127|ENST00000284273|UBASH3B	ENSG00000154127|ENST00000284273|UBASH3B	ENSG00000154127|ENST00000284273|UBASH3B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.326904296875	2	538.285128	1074.5557	3.4169	0.0018393	3.6744	0.0019779	7.0913	0.0038171	538.287116734914	100.95	0.44506	100.89	100.75	101.2	-0.052116					26	10	3	0	0	0	0.17457	1	10953	10953		42.864	5.7052	1	323180			25098	5253	16912	16922	28725	28725					0.021408140268476927
LAAARQLL	8	Unmodified	_LAAARQLL_					0	0	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2615966796875	2	428.27417	854.533787	2.6347	0.0011284	0.80894	0.00034645	3.4436	0.0014748	428.2746434970362	90.686	0.87464	90.732	90.347	91.222	0.04644					41	21	3	0	0	0	0.4196	1	9437	9437		26.796	8.4717	1	498470	+		25099	16148	16913	16923	28726	28726					0.1007009885960315
LAAARQLL	8	Unmodified	_LAAARQLL_					0	0	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	428.27417	854.533787	-0.17871	-7.6539E-05	5.6187	0.0024063	5.44	0.0023298	428.2766476496523	90.913	0.79299	90.982	90.598	91.391	0.069328	0.052401	0.0017298	NaN	19.36	36	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	610420	+		25100	16148	16913	16923							0.1007009885960315
LAAARQLL	8	Unmodified	_LAAARQLL_					0	0	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	428.27417	854.533787	1.3967	0.00059816	8.3562	0.0035787	9.7529	0.0041769	428.27752465560224	90.821	0.4075	90.754	90.393	90.8	-0.067093	-0.1759	0.0040746	NaN	19.36	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	303470	+		25101	16148	16913	16923							0.1007009885960315
LAAASQPKR	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LAAASQPKR_					1	0	0		chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1;ENST00000487066.5_1_17:16344415-16344739:+|nuORF	chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1	chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.78680419921875	2	492.285266	982.555979	5.5423	0.0027284	-0.1894	-9.3241E-05	5.3529	0.0026352	492.2850026312267	110.46	0.92664	110.53	110.23	111.16	0.068001					58	34	2	0	0	0	0.67345	1	13414	13414		42.396	6.7778	1	236270			25102	215	16914	16924	28727	28727					0.06400278537364557
LAAASQPKR	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LAAASQPKR_					1	0	0		chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1;ENST00000487066.5_1_17:16344415-16344739:+|nuORF	chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1	chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	492.285266	982.555979	-0.07738	-3.8093E-05	7.0663	0.0034786	6.9889	0.0034406	492.28744552801544	110.33	0.88343	110.27	110.12	111.01	-0.055084	-0.1044	0.0050259	NaN	42.396	59	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137720			25103	215	16914	16924							0.06400278537364557
LAAASQPKR	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LAAASQPKR_					1	0	0		chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1;ENST00000487066.5_1_17:16344415-16344739:+|nuORF	chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1	chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	492.285266	982.555979	2.846	0.0014011	2.704	0.0013312	5.5501	0.0027322	492.28652816802025	110.37	1.0414	110.34	110.07	111.11	-0.027634	-0.038082	0.00073094	NaN	42.396	45	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103700			25104	215	16914	16924							0.06400278537364557
LAAASQPKR	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LAAASQPKR_					1	0	0		chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1;ENST00000487066.5_1_17:16344415-16344739:+|nuORF	chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1	chr17:16441130-16467519|16|135.69|0.04|11.75|+|1|SNHG29,None|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	492.285266	982.555979	-0.80938	-0.00039844	3.7729	0.0018573	2.9635	0.0014589	492.28830167820803	110.41	0.93658	110.44	110.12	111.06	0.031738	0.065965	0.0017833	NaN	42.396	46	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95724			25105	215	16914	16924							0.06400278537364557
LAAASRIRV	9	Unmodified	_LAAASRIRV_					0	0	0			REV__ENSG00000068097|ENST00000184956|HEATR6	REV__ENSG00000068097|ENST00000184956|HEATR6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80523681640625	2	478.803626	955.592698	0.30032	0.0001438	4.0728	0.0019501	4.3731	0.0020939	478.8054155827557	41.804	1.1764	41.773	41.067	42.244	-0.030991					72	29	3	0	0	0	0.67345	1	3033	3033		42.396	8.2236	1	345190	+		25106	16553	16915	16925	28728	28728					0.11312575153931448
LAAATEKQK	9	Unmodified	_LAAATEKQK_					0	0	0		ENST00000405142.1_1_16:4744898-4745177:+|nuORF;ENSG00000168101|ENST00000304301|NUDT16L1	ENST00000405142.1_1_16:4744898-4745177:+|nuORF	ENST00000405142.1_1_16:4744898-4745177:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.2644348144531	2	480.279649	958.544745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.674	1	27.674	27.174	28.174	0								0	0	0	0.39224	1	1120	1120		53.351	5.6941	1				25107	6370	16916	16926	28729	28729					0.06381456443239131
LAACGLRPG	9	Unmodified	_LAACGLRPG_					0	0	0			REV__ENSG00000162878|ENST00000294964|PKDCC	REV__ENSG00000162878|ENST00000294964|PKDCC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.2359924316406	2	429.23673	856.458907	-1.7002	-0.00072977	-0.63366	-0.00027199	-2.3338	-0.0010018	429.23632496484737	63.188	2.3667	63.302	62.678	65.045	0.11389					282	104	4	0	0	0	0.77546	1	5512	5512		31.955	1.4512	1	6358600	+		25108	20857	16917	16927	28730	28730					0.02493593056726695
LAADELSEKTG	11	Unmodified	_LAADELSEKTG_					0	0	0			REV__ENSG00000167981|ENST00000301744|ZNF597	REV__ENSG00000167981|ENST00000301744|ZNF597	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.2889404296875	2	567.287868	1132.56118	-1.2024	-0.00068208	1.7794	0.0010094	0.57708	0.00032737	567.288700920988	109.93	0.63879	109.88	109.79	110.43	-0.055077					46	29	3	0	0	0	0.67778	1	11956	11956		35.152	0.97948	1	1162700	+		25109	21444	16918	16928	28731	28731					0.00020492818657658063
LAADPGLGT	9	Unmodified	_LAADPGLGT_					0	0	0		ENST00000585671.2_1_19:1599451-1605445:-|nuORF	ENST00000585671.2_1_19:1599451-1605445:-|nuORF	ENST00000585671.2_1_19:1599451-1605445:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.720703125	2	407.718893	813.423233	2.692	0.0010976	1.3451	0.00054843	4.0371	0.001646	407.71961983038284	102.12	1.3069	102.42	101.63	102.94	0.29865					72	31	4	0	0	0	0.76255	1	12422	12422		35.618	6.4687	1	5871700			25110	14152	16919	16929	28732	28732					0.00905834080731438
LAADTRGLVGQ	11	Unmodified	_LAADTRGLVGQ_					0	0	0		ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.8062133789062	2	550.806562	1099.59857	-1.5611	-0.00085986	1.7466	0.00096206	0.18555	0.0001022	550.8073038939729	29.672	1.5276	29.666	29.02	30.547	-0.0064812					96	34	5	0	0	0	0.53361	1	1903	1903		49.536	0.094497	1	1060600			25111	7432	16920	16930	28733	28733					0.052756288749378655
LAAELLALL	9	Unmodified	_LAAELLALL_					0	0	0			REV__nc|ENSG00000167741|Q6P531-2|GGT6	REV__nc|ENSG00000167741|Q6P531-2|GGT6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.79974365234375	2	463.799686	925.584819	-1.1413	-0.00052933	2.885	0.001338	1.7437	0.00080871	463.8009223906452	41.714	1.3576	41.718	41.166	42.524	0.0043983					77	36	3	0	0	0	0.7932	1	2728	2728		19.36	1.0356	1	388800	+		25112	21426	16921	16931	28734	28734					0.11905003113804469
LAAFEPRSQ	9	Unmodified	_LAAFEPRSQ_					0	0	0			REV__ENST00000523409.5_2_8:59347484-59360107:+|nuORF	REV__ENST00000523409.5_2_8:59347484-59360107:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7700500488281	2	509.769448	1017.52434	0.70856	0.0003612	2.6371	0.0013443	3.3456	0.0017055	509.7705721079712	17.832	0.53657	17.349	17.115	17.652	-0.48256					22	11	3	0	0	0	0.71772	1	325	325		39.253	2.8061	1	98132	+		25113	23676	16922	16932	28735	28735					0.01628285783431238
LAAFEPRSQ	9	Unmodified	_LAAFEPRSQ_					0	0	0			REV__ENST00000523409.5_2_8:59347484-59360107:+|nuORF	REV__ENST00000523409.5_2_8:59347484-59360107:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	509.769448	1017.52434	0.70856	0.0003612	2.6371	0.0013443	3.3456	0.0017055	509.7705721079712	17.832	0.53657	17.349	17.115	17.652	-0.48256	-0.054125	0.00031056	NaN	39.253	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98132	+		25114	23676	16922	16932							0.01628285783431238
LAAHCVGH	8	Unmodified	_LAAHCVGH_					0	0	0			REV__ENST00000557056.5_1_14:24800458-24802093:-|nuORF	REV__ENST00000557056.5_1_14:24800458-24802093:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.1700744628906	2	404.200148	806.385742	-0.23773	-9.6092E-05	2.9097	0.0011761	2.672	0.00108	404.2011995043408	77.783	0.3627	78.351	78.098	78.461	0.56835					10	8	2	0	0	0	0.4196	1	8890	8890		33.493	23.308	1	41647	+		25115	28671	16923	16933	28736	28736					-0.025195356658855417
LAAIQRQN	8	Unmodified	_LAAIQRQN_					0	0	0		ENSG00000154451|ENST00000370459|GBP5;ENST00000481145.1_1_1:89726389-89728307:-|nuORF	ENSG00000154451|ENST00000370459|GBP5	ENSG00000154451|ENST00000370459|GBP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2629699707031	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.86288	1	7983	7983		26.796	1.3459	1	4511100			25116	5278	16924	16934	28737	28737					0.054357228488470355
LAAKKPSV	8	Unmodified	_LAAKKPSV_					0	0	0			REV__nc|ENSG00000003987|Q9Y216-2|MTMR7	REV__nc|ENSG00000003987|Q9Y216-2|MTMR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.2661437988281	2	407.263271	812.511988	-0.1146	-4.6671E-05	3.967	0.0016156	3.8524	0.001569	407.264800655995	36.283	1.5728	36.264	35.692	37.265	-0.018673					54	34	2	0	0	0	0.84341	1	2299	2299		24.203	2.5004	1	126190	+		25117	16055	16925	16935	28738	28738					0.09823294111038194
LAALCLMTP	9	Carbamidomethyl (C)	_LAALC(Carbamidomethyl (C))LMTP_	LAALC(1)LMTP		LAALC(42)LMTP		0	1	0			REV__ENSG00000188352|ENST00000338382|FOCAD	REV__ENSG00000188352|ENST00000338382|FOCAD	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2599792480469	2	495.261556	988.508559	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.26	1	35.507	35.007	36.007	0.24769								0	0	0	0.30678	1	2678	2678		42.474	8.9589	1		+		25118	22998	16926	16936	28739	28739	279				0.013845399505044043
LAALFRPTPD	10	Unmodified	_LAALFRPTPD_					0	0	0		ENST00000550178.1_1_12:120933958-120934105:+|nuORF	ENST00000550178.1_1_12:120933958-120934105:+|nuORF	ENST00000550178.1_1_12:120933958-120934105:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.8084716796875	2	550.808574	1099.60259	-1.5149	-0.00083443	-2.1486	-0.0011835	-3.6635	-0.0020179	550.8072735830477	30.077	0.6332	30.077	29.793	30.426	0					50	19	3	0	0	0	0.80179	1	1368	1368		39.253	3.6345	1	258040			25119	13652	16927	16937	28740	28740					0.056777183686335775
LAALGMARHIR	11	Unmodified	_LAALGMARHIR_					0	0	0			REV__nc|ENSG00000143643|Q8NBP0-2|TTC13	REV__nc|ENSG00000143643|Q8NBP0-2|TTC13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57464599609375	3	403.573003	1207.69718	-0.098768	-3.986E-05	3.965	0.0016002	3.8663	0.0015603	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.54689	1	9442	9442		48.602	8.5434	1	16485000	+		25120	19830	16928	16938	28741	28741					0.10163953638993917
LAALPVGLS	9	Unmodified	_LAALPVGLS_					0	0	0		ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.7637634277344	2	420.763104	839.511654	-0.10506	-4.4205E-05	3.4811	0.0014647	3.3761	0.0014205	420.7645106071965	37.974	0.52336	37.916	37.695	38.219	-0.057915					24	16	2	0	0	0	0.69914	1	2239	2239		40.573	1.7665	1	84095			25121	2231	16929	16939	28742	28742					0.08547874391183541
LAALPVGLS	9	Unmodified	_LAALPVGLS_					0	0	0		ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7632141113281	2	420.763104	839.511654	0.17428	7.3331E-05	0.19203	8.0798E-05	0.36631	0.00015413	420.7630471716904	80.984	0.64572	81.406	81.102	81.748	0.4215					29	15	3	0	0	0	0.18566	1	9324	9324		76.847	2.8719	1	344520			25122	2231	16929	16939	28743	28743					0.08547874391183541
LAALPVGLS	9	Unmodified	_LAALPVGLS_					0	0	0		ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	420.763104	839.511654	-1.9109	-0.00080404	5.2005	0.0021882	3.2896	0.0013841	420.76525467081507	38.032	0.70564	38.032	37.67	38.376	0	0.01155	0.00095321	NaN	40.573	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92411			25123	2231	16929	16939							0.08547874391183541
LAALPVGLS	9	Unmodified	_LAALPVGLS_					0	0	0		ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	420.763104	839.511654	0.002899	1.2198E-06	3.4637	0.0014574	3.4666	0.0014586	420.7645329836585	38.319	0.77093	38.292	37.86	38.631	-0.027843	0.27083	-0.00050835	NaN	40.573	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42138			25124	2231	16929	16939							0.08547874391183541
LAALPVGLS	9	Unmodified	_LAALPVGLS_					0	0	0		ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	420.763104	839.511654	-1.1381	-0.00047886	4.2675	0.0017956	3.1295	0.0013168	420.76494671249134	38.133	0.79044	38.082	37.717	38.507	-0.050369	0.061655	0.00016814	NaN	40.573	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51341			25125	2231	16929	16939							0.08547874391183541
LAALPVGLS	9	Unmodified	_LAALPVGLS_					0	0	0		ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	420.763104	839.511654	0.73075	0.00030747	2.4494	0.0010306	3.1801	0.0013381	420.76402227104967	38.047	0.63393	38.058	37.724	38.358	0.011173	0.037322	-0.0013619	NaN	40.573	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51340			25126	2231	16929	16939							0.08547874391183541
LAALPVGLS	9	Unmodified	_LAALPVGLS_					0	0	0		ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	420.763104	839.511654	-1.8625	-0.00078366	5.6175	0.0023636	3.755	0.00158	420.7653702727122	38.191	0.77056	38.208	37.86	38.63	0.016563	0.18737	0.0013041	NaN	40.573	30	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94298			25127	2231	16929	16939							0.08547874391183541
LAALPVGLS	9	Unmodified	_LAALPVGLS_					0	0	0		ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	420.763104	839.511654	0.73078	0.00030749	1.3615	0.00057286	2.0923	0.00088035	420.7635532849177	37.422	0.60198	37.735	37.453	38.055	0.31312	-0.28522	-0.0022774	NaN	40.573	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70998			25128	2231	16929	16939							0.08547874391183541
LAALPVGLS	9	Unmodified	_LAALPVGLS_					0	0	0		ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	420.763104	839.511654	0.11906	5.0096E-05	-0.076887	-3.2351E-05	0.042173	1.7745E-05	420.76298563984074	80.911	0.56821	81.437	81.161	81.729	0.52676	0.01592	-0.00015481	NaN	76.847	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	329780			25129	2231	16929	16939							0.08547874391183541
LAALPVGLS	9	Unmodified	_LAALPVGLS_					0	0	0		ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	ENSG00000105641|ENST00000222248|SLC5A5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	420.763104	839.511654	0.7196	0.00030278	2.5234	0.0010618	3.243	0.0013645	420.7642013874591	37.325	0.44811	37.811	37.577	38.025	0.48581	-0.20973	-0.0012996	NaN	40.573	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59104			25130	2231	16929	16939							0.08547874391183541
LAALRQLG	8	Unmodified	_LAALRQLG_					0	0	0			REV__ENST00000403000.6_1_8:145690537-145690792:-|nuORF	REV__ENST00000403000.6_1_8:145690537-145690792:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.26397705078125	2	421.266345	840.518136	0.64724	0.00027266	-2.0925	-0.0008815	-1.4453	-0.00060884	421.26538963863794	76.249	0.66718	76.649	76.326	76.993	0.39969					22	15	2	0	0	0	0.88915	1	8652	8652		35.201	1.6851	1	283420	+		25131	26272	16930	16940	28744	28744					0.09149812342548103
LAANGADLSIR	11	Unmodified	_LAANGADLSIR_					0	0	0		ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.8057861328125	2	550.806562	1099.59857	0.35365	0.00019479	-0.3774	-0.00020787	-0.023743	-1.3078E-05	550.8062169600779	29.995	0.79504	29.952	29.555	30.35	-0.043095					31	17	3	0	0	0	0.67778	1	1612	1612		35.152	0.97948	1	71676			25132	1959	16931	16941	28745	28745					0.052756288749378655
LAANGADLSIR	11	Unmodified	_LAANGADLSIR_					0	0	0		ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.8073120117188	2	550.806562	1099.59857	0.83023	0.00045729	-1.0151	-0.00055911	-0.18484	-0.00010181	550.8059762800531	29.915	0.63903	29.9	29.601	30.24	-0.015167					24	14	2	0	0	0	0.57736	1	1519	1519		46.457	3.9823	1	81348			25133	1959	16931	16941	28746	28746					0.052756288749378655
LAANGADLSIR	11	Unmodified	_LAANGADLSIR_					0	0	0		ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	ENSG00000101752|ENST00000261537|MIB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8067016601562	2	550.806562	1099.59857	0.24565	0.0001353	-0.041853	-2.3053E-05	0.2038	0.00011225	550.8063464981013	29.888	1.5118	29.799	29.104	30.616	-0.089546					94	34	5	0	0	0	0.32318	2	1923	1923;1934		69.628	7.5202	1	1346500			25134	1959	16931	16941	28747;28748	28747					0.052756288749378655
LAANPSALR	9	Unmodified	_LAANPSALR_					0	0	0			REV__ENST00000310645.9_1_21:47548903-47549056:+|nuORF	REV__ENST00000310645.9_1_21:47548903-47549056:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.76580810546875	2	456.766709	911.518865	-0.35435	-0.00016185	2.0551	0.00093871	1.7008	0.00077686	456.76747065497955	16.53	0.35999	16.45	16.299	16.659	-0.080017					24	14	3	0	0	0	0.78536	1	134	134		29.15	1.2673	1	186080	+		25135	24894	16932	16942	28749	28749					0.05956606991594526
LAANSTPH	8	Unmodified	_LAANSTPH_					0	0	0			REV__ENSG00000161381|ENST00000315392|PLXDC1	REV__ENSG00000161381|ENST00000315392|PLXDC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2480163574219	2	405.70886	809.403166	-1.5016	-0.00060923	0.88123	0.00035752	-0.62041	-0.00025171	405.70901962217783	89.27	0.62227	89.741	89.476	90.098	0.47068					23	14	2	0	0	0	0.4196	1	10564	10564		35.618	13.658	1	422620	+		25136	20764	16933	16943	28750	28750					-0.009159168592532296
LAAPFPAPAVY	11	Unmodified	_LAAPFPAPAVY_					0	0	0		ENST00000462379.1_1_1:2435075-2436649:+|nuORF;nc|ENSG00000149527|O75038-3|PLCH2;ENSG00000149527|ENST00000378486|PLCH2	ENST00000462379.1_1_1:2435075-2436649:+|nuORF	ENST00000462379.1_1_1:2435075-2436649:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	558.3541870117188	2	558.808042	1115.60153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.269	1	23.269	22.769	23.769	0								0	0	0	0.56276	1	728	728		24.203	3.2558	1				25137	5033	16934	16944	28751	28751					0.04835503999743196
LAAPILLLAP	10	Unmodified	_LAAPILLLAP_					0	0	0			REV__nc|ENSG00000137404|Q8IXM6-6|NRM	REV__nc|ENSG00000137404|Q8IXM6-6|NRM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.3336486816406	2	496.331153	990.647754	-1.3548	-0.00067244	4.1362	0.0020529	2.7813	0.0013805	496.3331234696485	60.849	0.87923	60.849	60.216	61.095	0					55	36	2	0	0	0	0.87636	1	5349	5349		12.959	1.4482	1	67017	+		25138	19381	16935	16945	28752	28752					0.15205568901842526
LAAPPAALL	9	Unmodified	_LAAPPAALL_					0	0	0			REV__ENST00000493518.5_1_10:120514304-120514760:-|nuORF	REV__ENST00000493518.5_1_10:120514304-120514760:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.7646179199219	2	418.765646	835.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.194	1	33.364	32.864	33.864	0.16971								0	0	0	0.32542	1	2374	2374		21.702	0	1		+		25139	27695	16936	16946	28753	28753					0.0924017825378769
LAAQKREKLQK	11	Unmodified	_LAAQKREKLQK_					0	0	0		nc|ENSG00000149231|Q8N4S0-2|CCDC82;ENST00000530106.1_1_11:96116391-96117917:-|nuORF;ENSG00000149231|ENST00000646818|CCDC82	nc|ENSG00000149231|Q8N4S0-2|CCDC82	nc|ENSG00000149231|Q8N4S0-2|CCDC82	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.56915283203125	3	438.273499	1311.79867	0.34734	0.00015223	-0.4769	-0.00020901	-0.12956	-5.6783E-05	438.27329098340806	33.977	0.78427	34.187	33.82	34.604	0.21003					41	18	3	0	0	0	0.17811	1	2525	2525		10.104	0	1	220640			25140	5007	16937	16947	28754	28754					0.15524103542543344
LAAQKVISK	9	Unmodified	_LAAQKVISK_					0	0	0		nc|ENSG00000082212|P23368-2|ME2;ENSG00000082212|ENST00000321341|ME2	nc|ENSG00000082212|P23368-2|ME2	nc|ENSG00000082212|P23368-2|ME2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.30645751953125	2	479.30821	956.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.269	1	59.238	58.738	59.738	-0.030888								0	0	0	0.32469	1	5544	5544		21.96	0.25755	1				25141	1482	16938	16948	28755	28755					0.12182923719603878
LAAQLHAFLKL	11	Unmodified	_LAAQLHAFLKL_					0	0	0		ENST00000437882.2_1_12:8382094-8384253:+|nuORF	ENST00000437882.2_1_12:8382094-8384253:+|nuORF	ENST00000437882.2_1_12:8382094-8384253:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.9220275878906	3	408.920286	1223.73903	0.73412	0.0003002	4.0803	0.0016685	4.8145	0.0019687	408.92190975649805	104.5	3.3645	104.62	103.39	106.76	0.11684					226	83	5	0	0	0	0.72918	1	11118	11118		29.551	0	1	4256600			25142	11744	16939	16949	28756	28756					0.13610832599169953
LAAQLSANL	9	Unmodified	_LAAQLSANL_					0	0	0			REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF	REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7616271972656	2	450.761092	899.507631	-1.3461	-0.00060678	1.5457	0.00069675	0.19961	8.9978E-05	450.76163292846263	37.672	0.59956	37.689	37.398	37.997	0.016563					33	19	2	0	0	0	0.71772	1	2200	2200		39.253	0.44669	1	175230	+		25143	18780	16940	16950	28757	28757					0.053857848974644185
LAAQLSANL	9	Unmodified	_LAAQLSANL_					0	0	0			REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF	REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.76141357421875	2	450.761092	899.507631	0.18364	8.278E-05	-0.15966	-7.1969E-05	0.023983	1.0811E-05	450.7609047940763	37.497	0.57988	37.596	37.313	37.893	0.099277					37	20	2	0	0	0	0.28163	1	2150	2150		66.429	11.653	1	199610	+		25144	18780	16940	16950	28758	28758					0.053857848974644185
LAAQLSANL	9	Unmodified	_LAAQLSANL_					0	0	0			REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF	REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	450.761092	899.507631	-1.9171	-0.00086416	2.4508	0.0011047	0.53363	0.00024054	450.76196840981265	37.573	0.40081	37.573	37.395	37.796	0	-0.042651	0.0016797	NaN	66.429	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63632	+		25145	18780	16940	16950							0.053857848974644185
LAAQLSANL	9	Unmodified	_LAAQLSANL_					0	0	0			REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF	REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	450.761092	899.507631	0.020346	9.1712E-06	0.36495	0.00016451	0.3853	0.00017368	450.76124346244256	37.716	0.51464	37.692	37.528	38.043	-0.023979	0.076387	-0.00020069	NaN	66.429	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25155	+		25146	18780	16940	16950							0.053857848974644185
LAAQLSANL	9	Unmodified	_LAAQLSANL_					0	0	0			REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF	REV__ENST00000441290.6_1_7:114296499-114304492:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	450.761092	899.507631	0.017655	7.9582E-06	0.41552	0.0001873	0.43317	0.00019526	450.76097096710026	37.587	0.61326	37.529	37.238	37.851	-0.057915	-0.086936	-0.0001551	NaN	66.429	36	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186270	+		25147	18780	16940	16950							0.053857848974644185
LAAQRRGE	8	Unmodified	_LAAQRRGE_					0	0	0		nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1;ENSG00000107223|ENST00000224073|EDF1	nc|ENSG00000107223|O60869-2|EDF1	nc|ENSG00000107223|O60869-2|EDF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.75439453125	2	450.754133	899.493713	-1.5537	-0.00070033	1.6807	0.0007576	0.12705	5.7268E-05	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.82658	1	7629	7629		21.96	1.013	1	298090			25148	2336	16941	16951	28759	28759					0.03994552189044498
LAAQRRMY	8	Oxidation (M)	_LAAQRRM(Oxidation (M))Y_		LAAQRRM(1)Y		LAAQRRM(50)Y	0	0	1			REV__ENST00000517973.1_1_5:150400193-150407688:+|nuORF	REV__ENST00000517973.1_1_5:150400193-150407688:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.7696533203125	2	512.771468	1023.52838	-0.85034	-0.00043603	-3.6721	-0.001883	-4.5225	-0.002319	512.7693435054609	38.406	0.83609	38.356	38.028	38.864	-0.050369					52	18	4	0	0	0	0.92973	1	2730	2730		50.025	14.406	1	590040	+		25149	23596	16942	16952	28760	28760					0.017560520054985318
LAARKCRRCF	10	Unmodified	_LAARKCRRCF_					0	0	0			REV__ENST00000260264.8_1_11:120189625-120190027:+|nuORF	REV__ENST00000260264.8_1_11:120189625-120190027:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.3336791992188	2	612.334244	1222.65394	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.501	1	57.607	57.107	58.107	0.1055								0	0	0	0.45132	1	4873	4873		37.159	0.71236	1		+		25150	24365	16943	16953	28761	28761					0.051514405900661586
LAARTLPEL	9	Unmodified	_LAARTLPEL_					0	0	0			REV__ENST00000360270.6_1_X:64959754-64959913:+|nuORF	REV__ENST00000360270.6_1_X:64959754-64959913:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.2980651855469	2	492.297842	982.581131	-0.51073	-0.00025143	0.16757	8.2494E-05	-0.34316	-0.00016894	492.2977647758313	53.848	1.3804	54.432	53.872	55.253	0.58474					77	32	4	0	0	0	0.18338	1	5472	5472		77.318	0.47095	1	1886000	+		25151	25474	16944	16954	28762	28762					0.08914333339930636
LAARVVRHGP	10	Unmodified	_LAARVVRHGP_					0	0	0			REV__ENST00000479282.5_1_1:16272460-16274990:-|nuORF	REV__ENST00000479282.5_1_1:16272460-16274990:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.32568359375	2	538.327799	1074.64105	-1.4902	-0.00080221	0.37298	0.00020079	-1.1172	-0.00060142	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.86718	1	12392	12392		27.882	3.3631	1	4041000	+		25152	27399	16945	16955	28763	28763					0.10671068793840277
LAAVLLFE	8	Unmodified	_LAAVLLFE_					0	0	0		ENST00000479866.5_1_12:48143124-48152369:-|nuORF;ENST00000482843.5_1_12:48142600-48152369:-|nuORF;nc|ENSG00000079337|O95398-3|RAPGEF3;ENSG00000079337|ENST00000449771|RAPGEF3;nc|ENSG00000079337|O95398-2|RAPGEF3	ENST00000479866.5_1_12:48143124-48152369:-|nuORF;nc|ENSG00000079337|O95398-2|RAPGEF3	nc|ENSG00000079337|O95398-2|RAPGEF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2608642578125	2	438.265479	874.516405	-1.8646	-0.00081717	-3.5126	-0.0015394	-5.3771	-0.0023566	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.88915	1	3142	3142		35.201	4.6971	1	3384400			25153	12422;14787	16946	16956	28764	28764					0.07412758533951092
LACAYDAIL	9	Unmodified	_LACAYDAIL_					0	0	0			REV__ENST00000486457.5_1_3:113557756-113601627:+|nuORF	REV__ENST00000486457.5_1_3:113557756-113601627:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.7425231933594	2	476.744053	951.473554	-0.99369	-0.00047373	-1.7798	-0.00084849	-2.7734	-0.0013222	476.74302300808216	78.629	0.84048	78.681	78.157	78.998	0.051674					33	22	2	0	0	0	0.67235	1	7748	7748		42.474	1.9018	1	129950	+		25154	22251	16947	16957	28765	28765					-0.004123795857935875
LACHPPLSPG	10	Unmodified	_LACHPPLSPG_					0	0	0		ENSG00000145911|ENST00000274605|N4BP3	ENSG00000145911|ENST00000274605|N4BP3	ENSG00000145911|ENST00000274605|N4BP3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.809326171875	2	496.25512	990.495686	-0.78538	-0.00038975	2.6283	0.0013043	1.8429	0.00091455	496.25659683368417	38.261	0.88431	38.603	38.265	39.149	0.34187					51	21	3	0	0	0	0.37624	1	3123	3123		55.504	0	1	406030			25155	4804	16948	16958	28766	28766					5.844882628025516E-05
LACYSGHS	8	Unmodified	_LACYSGHS_					0	0	0			REV__chr14:47301550-47674517|22|29.41|0.16|7.52|-|1|MDGA2,MDGA2|1	REV__chr14:47301550-47674517|22|29.41|0.16|7.52|-|1|MDGA2,MDGA2|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1839294433594	2	419.18162	836.348688	0.63595	0.00026658	3.8981	0.001634	4.5341	0.0019006	419.18328969471196	86.477	1.2293	86.92	86.409	87.638	0.44331					73	29	4	0	0	0	0.92176	1	10103	10103		46.766	0.81448	1	2405500	+		25156	15595	16949	16959	28767	28767					-0.07603252002309091
LADAIGGKLYL	11	Unmodified	_LADAIGGKLYL_					0	0	0			REV__nc|ENSG00000236764|O60397|COX7A2P2	REV__nc|ENSG00000236764|O60397|COX7A2P2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.330078125	2	567.331882	1132.64921	-0.50942	-0.00028901	-1.8517	-0.0010506	-2.3612	-0.0013396	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.62614	1	10763	10763		41.427	8.6142	1	5685000	+		25157	30227	16950	16960	28768	28768					0.08819158199935373
LADEREQV	8	Unmodified	_LADEREQV_					0	0	0			REV__nc|ENSG00000136522|Q9HD33-3|MRPL47	REV__nc|ENSG00000136522|Q9HD33-3|MRPL47	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.24102783203125	2	480.243264	958.471974	0.093776	4.5035E-05	-0.35976	-0.00017277	-0.26598	-0.00012773	480.2429209398555	32.615	0.74674	32.626	32.298	33.044	0.010899					34	18	3	0	0	0	0.84634	1	1826	1826		60.294	2.4827	1	131240	+		25158	19316	16951	16961	28769	28769					-0.008922973501853448
LADGSMDV	8	Unmodified	_LADGSMDV_					0	0	0		ENSG00000170439|ENST00000394252|METTL7B	ENSG00000170439|ENST00000394252|METTL7B	ENSG00000170439|ENST00000394252|METTL7B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.1702880859375	2	404.181286	806.348019	0.041989	1.6971E-05	-3.6684	-0.0014827	-3.6264	-0.0014657	404.17976693565254	78.885	0.13076	78.831	78.751	78.882	-0.053558					4	2	2	0	0	0	0.4196	1	7875	7875		18.324	11.131	1	6160.3			25159	6589	16952	16962	28770	28770					-0.0629009144201973
LADILTLGL	9	Unmodified	_LADILTLGL_					0	0	0			REV__ENSG00000177239|ENST00000371589|MAN1B1	REV__ENSG00000177239|ENST00000371589|MAN1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7906494140625	2	464.789318	927.564084	0.17035	7.9177E-05	2.8409	0.0013204	3.0113	0.0013996	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.76996	1	1717	1717		33.516	6.7195	1	283920	+		25160	22192	16953	16963	28771	28771					0.09740412734140591
LADLYRNCET	10	Unmodified	_LADLYRNCET_					0	0	0		ENSG00000176986|ENST00000345254|SEC24C;nc|ENSG00000176986|P53992-2|SEC24C	ENSG00000176986|ENST00000345254|SEC24C	ENSG00000176986|ENST00000345254|SEC24C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.2824096679688	2	599.282063	1196.54957	0.86367	0.00051758	-1.236	-0.00074072	-0.37234	-0.00022314	599.2811697198755	41.901	1.0231	41.905	41.501	42.524	0.0043983					72	26	4	0	0	0	0.2953	1	2746	2746		72.879	12.761	1	2426200			25161	7112	16954	16964	28772	28772					-0.04084027476301344
LADNNWYSSK	10	Unmodified	_LADNNWYSSK_					0	0	0			REV__nc|ENSG00000138639|Q8N264-5|ARHGAP24	REV__nc|ENSG00000138639|Q8N264-5|ARHGAP24	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	599.2761840820312	2	599.280377	1196.5462	-1.7404	-0.001043	3.0246	0.0018126	1.2843	0.00076963	599.282071651876	41.146	1.0136	41.78	41.532	42.546	0.6339					60	27	4	0	0	0	0.2575	1	3581	3581		77.318	26.125	1	11653000	+		25162	29885	16955	16965	28773	28773					-0.0442095425869411
LADTAPTLLV	10	Unmodified	_LADTAPTLLV_					0	0	0			REV__nc|ENSG00000102900|Q8N1F7-2|NUP93	REV__nc|ENSG00000102900|Q8N1F7-2|NUP93	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.7932434082031	2	507.297507	1012.58046	0.21315	0.00010813	-2.4201	-0.0012277	-2.207	-0.0011196	507.2947673535406	33.121	0.63534	33.291	32.764	33.399	0.16971					17	14	2	0	0	0	0.37624	1	2350	2350		37.159	22.495	1	102260	+		25163	17370	16956	16966	28774	28774					0.07467493900242061
LADTAPTLLV	10	Unmodified	_LADTAPTLLV_					0	0	0			REV__nc|ENSG00000102900|Q8N1F7-2|NUP93	REV__nc|ENSG00000102900|Q8N1F7-2|NUP93	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	507.297507	1012.58046	0.19771	0.0001003	3.6902	0.001872	3.8879	0.0019723	507.8019777328641	32.885	0.13028	32.994	32.921	33.052	0.10991	-0.14814	0.0001383	NaN	37.159	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35800	+		25164	17370	16956	16966							0.07467493900242061
LADTASFC	8	Unmodified	_LADTASFC_					0	0	0			REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.1829833984375	2	414.183829	826.353105	-0.0089364	-3.7013E-06	-1.6681	-0.00069091	-1.6771	-0.00069461	414.1831575874291	80.191	1.3701	80.718	80.359	81.729	0.52677					70	32	5	0	0	0	0.88915	1	9256	9256		35.201	1.6851	1	1803500	+		25165	17948	16957	16967	28775	28775					-0.06701787579402207
LADTASFC	8	Unmodified	_LADTASFC_					0	0	0			REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	REV__nc|ENSG00000112494|Q86WB7-2|UNC93A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.18280029296875	2	414.183829	826.353105	0.057291	2.3729E-05	-2.9845	-0.0012361	-2.9272	-0.0012124	414.183038729514	81.859	1.246	82.359	81.993	83.239	0.49966					82	30	4	0	0	0	0.91005	1	9481	9481		42.474	11.971	1	2817400	+		25166	17948	16957	16967	28776	28776					-0.06701787579402207
LADYILTQIR	10	Unmodified	_LADYILTQIR_					0	0	0			REV__ENSG00000184156|ENST00000388996|KCNQ3	REV__ENSG00000184156|ENST00000388996|KCNQ3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2525939941406	3	402.567801	1204.68157	1.9742	0.00079476	3.7676	0.0015167	5.7418	0.0023115	402.5690614268482	20.93	0.39788	20.471	20.366	20.764	-0.4591					15	9	2	0	0	0	0.37624	1	733	733		31.634	19.998	1	30936	+		25167	22647	16958	16968	28777	28777					0.08741945602923806
LAEAEQYLY	9	Unmodified	_LAEAEQYLY_					0	0	0			REV__nc|ENSG00000203877|Q5TAB7-2|RIPPLY2	REV__nc|ENSG00000203877|Q5TAB7-2|RIPPLY2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.7720336914062	2	550.268947	1098.52334	-0.59081	-0.0003251	1.0737	0.00059082	0.48289	0.00026572	550.2693927818814	66.982	0.53371	66.999	66.752	67.285	0.016205					39	23	2	0	0	0	0.31972	1	6282	6282		63.306	2.3343	1	219840	+		25168	23443	16959	16969	28778	28778					-0.021979733761327225
LAEAEQYLY	9	Unmodified	_LAEAEQYLY_					0	0	0			REV__nc|ENSG00000203877|Q5TAB7-2|RIPPLY2	REV__nc|ENSG00000203877|Q5TAB7-2|RIPPLY2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	550.268947	1098.52334	0.18283	0.00010061	0.24104	0.00013264	0.42387	0.00023324	550.269036992345	66.743	0.46818	66.876	66.676	67.144	0.13326	-0.056848	-0.00059001	NaN	63.306	32	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124660	+		25169	23443	16959	16969							-0.021979733761327225
LAEARLMW	8	Unmodified	_LAEARLMW_					0	0	0			REV__ENST00000377126.3_1_9:73028468-73028720:-|nuORF	REV__ENST00000377126.3_1_9:73028468-73028720:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.26641845703125	2	495.265487	988.516422	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.309	1	52.322	51.822	52.822	0.012436								0	0	0	0.29703	1	4553	4553		37.159	2.9866	1		+		25170	25857	16960	16970	28779	28779					0.021704352622919032
LAEAYRLKY	9	Unmodified	_LAEAYRLKY_					0	0	0		ENSG00000065491|ENST00000373491|TBC1D22B	ENSG00000065491|ENST00000373491|TBC1D22B	ENSG00000065491|ENST00000373491|TBC1D22B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.8181762695312	2	563.816399	1125.61824	-0.38057	-0.00021457	-0.23391	-0.00013188	-0.61448	-0.00034645	563.8160913827608	46.438	0.97107	46.909	46.09	47.061	0.47139					54	23	3	0	0	0	0.69624	1	4385	4385		40.778	1.5253	1	1137700			25171	1130	16961	16971	28780	28780					0.060460048857066795
LAEDVQVDP	9	Unmodified	_LAEDVQVDP_					0	0	0		ENSG00000141639|ENST00000400384|MAPK4	ENSG00000141639|ENST00000400384|MAPK4	ENSG00000141639|ENST00000400384|MAPK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.2478942871094	2	493.245472	984.476391	0.44489	0.00021944	0.95609	0.00047159	1.401	0.00069103	493.24582366684365	27.777	1.5267	27.813	27.395	28.922	0.03607					129	51	4	0	0	0	0.70638	1	1345	1345		40.058	2.2467	1	868330			25172	4519	16962	16972	28781	28781					-0.01646832927281139
LAEIIQII	8	Unmodified	_LAEIIQII_					0	0	0		nc|ENSG00000067798|Q8IVL0-3|NAV3;nc|ENSG00000067798|Q8IVL0-2|NAV3;ENSG00000067798|ENST00000397909|NAV3;ENST00000551277.1_1_12:78334161-78341216:+|nuORF	nc|ENSG00000067798|Q8IVL0-3|NAV3	nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7894287109375	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.90465	1	3626	3626		40.573	0	1	662040			25173	1188	16963	16973	28782	28782					0.10984716596760791
LAEILQANDL	10	Unmodified	_LAEILQANDL_					0	0	0		ENSG00000103365|ENST00000309859|GGA2	ENSG00000103365|ENST00000309859|GGA2	ENSG00000103365|ENST00000309859|GGA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3040161132812	2	550.303321	1098.59209	-0.11602	-6.3845E-05	-0.028758	-1.5826E-05	-0.14478	-7.967E-05	550.3032368896779	80.497	0.71326	81.024	80.653	81.366	0.52677					37	16	3	0	0	0	0.5442	1	9283	9283		53.089	0	1	385810			25174	2079	16964	16974	28783	28783					0.04673690923573304
LAEILQANDL	10	Unmodified	_LAEILQANDL_					0	0	0		ENSG00000103365|ENST00000309859|GGA2	ENSG00000103365|ENST00000309859|GGA2	ENSG00000103365|ENST00000309859|GGA2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	550.303321	1098.59209	-0.93169	-0.00051271	1.324	0.00072858	0.39227	0.00021587	550.3037222016301	80.524	0.6308	80.945	80.637	81.268	0.4215	-0.039126	0.00073812	NaN	53.089	36	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	323300			25175	2079	16964	16974							0.04673690923573304
LAELFPLHRRL	11	Unmodified	_LAELFPLHRRL_					0	0	0			REV__nc|ENSG00000155093|Q92932-4|PTPRN2	REV__nc|ENSG00000155093|Q92932-4|PTPRN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6087951660156	3	455.610223	1363.80884	-1.2135	-0.00055287	-2.7106	-0.001235	-3.924	-0.0017878	455.6089380112046	69.06	0.71138	69.195	68.826	69.537	0.13521					50	31	2	0	0	0	0.76892	1	6236	6236		17.833	1.3033	1	210520	+		25176	20415	16965	16975	28784	28784					0.14148711267762337
LAELFPLHRRL	11	Unmodified	_LAELFPLHRRL_					0	0	0			REV__nc|ENSG00000155093|Q92932-4|PTPRN2	REV__nc|ENSG00000155093|Q92932-4|PTPRN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.609130859375	3	455.610223	1363.80884	-1.1702	-0.00053316	-2.8844	-0.0013142	-4.0546	-0.0018473	455.6088473881977	71.256	2.1835	71.333	70.628	72.811	0.076225					206	91	3	0	0	0	0.74405	1	6617	6617		23.378	0.81632	1	589510	+		25177	20415	16965	16975	28785	28785					0.14148711267762337
LAENSVKLKN	10	Unmodified	_LAENSVKLKN_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	559.3187866210938	2	558.324588	1114.63462	-0.44932	-0.00025086	0.65102	0.00036348	0.20171	0.00011262	558.324853417314	100.51	0.94954	100.51	100.04	100.99	0					37	21	2	0	0	0	0.37624	1	10249	10249		47.657	0	1	122970			25178	1214	16966	16976	28786	28786					0.081890860518115
LAEPALVSL	9	Unmodified	_LAEPALVSL_					0	0	0			REV__nc|ENSG00000100399|Q6NUI6-2|CHADL	REV__nc|ENSG00000100399|Q6NUI6-2|CHADL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7727355957031	2	456.773668	911.532783	-1.1567	-0.00052834	-1.685	-0.00076968	-2.8417	-0.001298	456.7726883987969	89.791	2.1769	90.003	88.879	91.056	0.21271					109	51	4	0	0	0	0.78536	1	9014	9014		29.15	3.6994	1	1072500	+		25179	17188	16967	16977	28787	28787					0.07347839700048553
LAERMEQI	8	Unmodified	_LAERMEQI_					0	0	0			REV__ENSG00000087365|ENST00000322535|SF3B2	REV__ENSG00000087365|ENST00000322535|SF3B2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2600402832031	2	495.257859	988.501166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.873	1	35.083	34.583	35.583	0.21003								0	0	0	0.29703	1	2618	2618		37.159	1.5408	1		+		25180	16934	16968	16978	28788	28788					0.006455236744614012
LAEVIVVIG	9	Unmodified	_LAEVIVVIG_					0	0	0		ENSG00000149243|ENST00000539798|KLHL35;ENST00000460787.1_1_11:75137492-75141101:-|nuORF;nc|ENSG00000149243|Q6PF15-2|KLHL35	ENSG00000149243|ENST00000539798|KLHL35	ENSG00000149243|ENST00000539798|KLHL35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7920837402344	2	456.791861	911.569169	0.30037	0.00013721	2.5195	0.0011509	2.8199	0.0012881	456.79289757972145	49.9	2.3678	49.942	48.602	50.969	0.04224					107	64	2	0	0	0	0.7932	1	3902	3902		25.45	0	1	208080			25181	5008	16969	16979	28789	28789					0.1098471659677216
LAEYIRTEM	9	Unmodified	_LAEYIRTEM_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17;ENST00000586052.5_1_17:76423133-76435249:-|nuORF	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.28857421875	2	563.284074	1124.5536	3.058	0.0017225	2.3594	0.001329	5.4174	0.0030515	563.2854378173162	111.25	0.85882	111.22	110.91	111.76	-0.026314					51	32	2	0	0	0	0.77696	1	12316	12316		31.53	0	1	99042			25182	7880	16970	16980	28790	28790					-0.003699379825775395
LAEYLTIKHY	10	Unmodified	_LAEYLTIKHY_					0	0	0		nc|ENSG00000173575|O14647-2|CHD2;ENSG00000173575|ENST00000394196|CHD2	nc|ENSG00000173575|O14647-2|CHD2	nc|ENSG00000173575|O14647-2|CHD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.56658935546875	3	417.564168	1249.67067	1.5563	0.00064986	4.4533	0.0018595	6.0096	0.0025094	417.566009299332	36.081	1.0477	36.521	36.149	37.197	0.44043					71	25	5	0	0	0	0.85934	1	2817	2817		40.058	0	1	3022200			25183	6870	16971	16981	28791	28791					0.055825432286837895
LAGAGRRL	8	Unmodified	_LAGAGRRL_					0	0	0		ENST00000602622.5_1_16:67693276-67693435:-|nuORF	ENST00000602622.5_1_16:67693276-67693435:-|nuORF	ENST00000602622.5_1_16:67693276-67693435:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5708312988281	2	407.256311	812.49807	1.132	0.00046101	-3.4179	-0.0013919	-2.2859	-0.00093094	407.25475700800877	26.004	0.78994	25.747	25.424	26.214	-0.2572					31	17	2	0	0	0	0.4196	1	1434	1434		29.842	1.5873	1	90766			25184	14410	16972	16982	28792	28792					0.08432061402606905
LAGAGRRL	8	Unmodified	_LAGAGRRL_					0	0	0		ENST00000602622.5_1_16:67693276-67693435:-|nuORF	ENST00000602622.5_1_16:67693276-67693435:-|nuORF	ENST00000602622.5_1_16:67693276-67693435:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	407.256311	812.49807	2.3884	0.0009727	-4.6638	-0.0018993	-2.2753	-0.00092664	407.25431633842487	25.978	0.72397	25.547	25.191	25.915	-0.4311	-0.099928	-0.00063066	NaN	29.842	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105670			25185	14410	16972	16982							0.08432061402606905
LAGDAKPH	8	Unmodified	_LAGDAKPH_					0	0	0			REV__ENSG00000168939|ENST00000695325|SPRY3	REV__ENSG00000168939|ENST00000695325|SPRY3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.1701354980469	2	404.719227	807.423902	-0.23048	-9.3278E-05	-4.0827	-0.0016523	-4.3131	-0.0017456	404.7166876499424	77.63	0.16064	78.199	78.139	78.3	0.56836					5	3	2	0	0	0	0.4196	1	8866	8866		44.117	8.9161	1	57365	+		25186	21537	16973	16983	28793	28793					0.012486735204220167
LAGERYAR	8	Unmodified	_LAGERYAR_					0	0	0			REV__nc|ENSG00000102871|Q15628-2|TRADD	REV__nc|ENSG00000102871|Q15628-2|TRADD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2555236816406	2	468.256508	934.498464	-0.11516	-5.3922E-05	-3.5335	-0.0016546	-3.6487	-0.0017085	468.25473552954975	82.299	3.2758	82.365	81.1	84.376	0.06591					140	75	2	0	0	0	0.89962	1	8066	8066		38.806	3.6054	1	190410	+		25187	17365	16974	16984	28794	28794					0.028594363317893112
LAGFLLPASLA	11	Unmodified	_LAGFLLPASLA_					0	0	0		ENST00000579192.5_1_17:8198292-8198649:-|nuORF	ENST00000579192.5_1_17:8198292-8198649:-|nuORF	ENST00000579192.5_1_17:8198292-8198649:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2808837890625	2	536.823692	1071.63283	-0.32066	-0.00017214	1.1531	0.00061899	0.8324	0.00044685	537.3255094676587	48.55	0.35609	49.454	49.369	49.725	0.90424					9	8	2	0	0	0	0.17332	1	4720	4720		16.473	0.83134	1	65202			25188	14085	16975	16985	28795	28795					0.09988077033835907
LAGFLLPASLA	11	Unmodified	_LAGFLLPASLA_					0	0	0		ENST00000579192.5_1_17:8198292-8198649:-|nuORF	ENST00000579192.5_1_17:8198292-8198649:-|nuORF	ENST00000579192.5_1_17:8198292-8198649:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	536.823692	1071.63283	-0.73873	-0.00039657	2.4865	0.0013348	1.7477	0.00093823	537.3261621921283	48.798	0.23608	49.258	49.143	49.38	0.45983	-0.098313	0.00042988	NaN	16.473	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72300			25189	14085	16975	16985							0.09988077033835907
LAGFTIIV	8	Unmodified	_LAGFTIIV_					0	0	0		nc|ENSG00000137204|Q9Y694-3|SLC22A7;nc|ENSG00000137204|Q9Y694-2|SLC22A7;ENSG00000137204|ENST00000372585|SLC22A7	nc|ENSG00000137204|Q9Y694-3|SLC22A7	nc|ENSG00000137204|Q9Y694-3|SLC22A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2591247558594	2	417.260197	832.50584	-0.38397	-0.00016022	-3.5679	-0.0014888	-3.9519	-0.001649	417.2585749889359	22.175	2.752	22.117	21.499	24.251	-0.05867					139	87	2	0	0	0	0.86288	1	736	736		26.796	3.7536	1	87379			25190	4179	16976	16986	28796	28796					0.08288775879509558
LAGFVLPNA	9	Unmodified	_LAGFVLPNA_					0	0	0		ENSG00000135912|ENST00000392102|TTLL4;ENST00000465558.5_1_2:219612840-219617731:+|nuORF	ENSG00000135912|ENST00000392102|TTLL4	ENSG00000135912|ENST00000392102|TTLL4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2632751464844	2	451.260728	900.506903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.65	1	37.6	37.1	38.1	-0.050369								0	0	0	0.29299	1	2588	2588		33.516	0.022601	1				25191	4063	16977	16987	28797	28797					0.05266990248424008
LAGGLVLFFF	10	Unmodified	_LAGGLVLFFF_					0	0	0		nc|ENSG00000033627|Q93050-1|ATP6V0A1;ENSG00000033627|ENST00000343619|ATP6V0A1;nc|ENSG00000033627|Q93050-3|ATP6V0A1;ENST00000588806.1_1_17:40665776-40673135:+|nuORF	nc|ENSG00000033627|Q93050-1|ATP6V0A1	nc|ENSG00000033627|Q93050-1|ATP6V0A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.3190307617188	2	542.315503	1082.61645	2.1481	0.0011649	4.1026	0.0022249	6.2507	0.0033899	542.3176764872975	26.019	1.1415	25.588	25.272	26.413	-0.4311					66	25	4	0	0	0	0.70264	1	1431	1431		44.531	0.15388	1	2664100			25192	893	16978	16988	28798	28798					0.07844995867731086
LAGKLVDL	8	Unmodified	_LAGKLVDL_					0	0	0		ENST00000549928.5_1_12:60154925-60173457:+|nuORF;ENSG00000118596|ENST00000547379|SLC16A7	ENST00000549928.5_1_12:60154925-60173457:+|nuORF	ENST00000549928.5_1_12:60154925-60173457:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	414.76177978515625	2	414.763104	827.511654	-0.18703	-7.7573E-05	-3.202	-0.0013281	-3.389	-0.0014056	414.7617349673395	88.474	3.4521	88.542	87.228	90.68	0.068161					244	80	5	0	0	0	0.89962	1	9100	9100		38.806	3.1879	1	13272000			25193	3039	16979	16989	28799	28799					0.09099874391165486
LAGKRIGVF	9	Unmodified	_LAGKRIGVF_					0	0	0		ENST00000508319.1_1_5:43294149-43294911:-|nuORF;ENSG00000112972|ENST00000325110|HMGCS1	ENST00000508319.1_1_5:43294149-43294911:-|nuORF	ENST00000508319.1_1_5:43294149-43294911:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.2828369140625	2	480.803094	959.591636	-0.09483	-4.5595E-05	-3.9962	-0.0019214	-4.091	-0.001967	480.80110976352336	103.61	0.80873	103.61	103.31	104.12	-0.0035706					25	19	2	0	0	0	0.20789	1	11125	11125		20.482	8.275	1	87785			25194	2690	16980	16990	28800	28800					0.11022360785045748
LAGKRIGVF	9	Unmodified	_LAGKRIGVF_					0	0	0		ENST00000508319.1_1_5:43294149-43294911:-|nuORF;ENSG00000112972|ENST00000325110|HMGCS1	ENST00000508319.1_1_5:43294149-43294911:-|nuORF	ENST00000508319.1_1_5:43294149-43294911:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8011474609375	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.76996	1	9893	9893		33.516	5.2613	1	17379000			25195	2690	16980	16990	28801	28801					0.11022360785045748
LAGKRIGVF	9	Unmodified	_LAGKRIGVF_					0	0	0		ENST00000508319.1_1_5:43294149-43294911:-|nuORF;ENSG00000112972|ENST00000325110|HMGCS1	ENST00000508319.1_1_5:43294149-43294911:-|nuORF	ENST00000508319.1_1_5:43294149-43294911:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	480.803094	959.591636	-0.78218	-0.00037608	-3.0506	-0.0014667	-3.8328	-0.0018428	480.8014229850575	103.23	0.90166	103.41	103.12	104.02	0.18298	-0.079477	0.0019378	NaN	13.775	29	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191730			25196	2690	16980	16990							0.11022360785045748
LAGKRVEVF	9	Unmodified	_LAGKRVEVF_					0	0	0			REV__ENST00000368445.9_1_1:154935358-154935397:-|nuORF	REV__ENST00000368445.9_1_1:154935358-154935397:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.8068542480469	2	509.805834	1017.59712	0.39262	0.00020016	-2.0887	-0.0010648	-1.696	-0.00086465	509.80540438732885	89.418	1.4191	89.467	89.138	90.557	0.048157					69	32	3	0	0	0	0.20789	1	9303	9303		7.1934	0	1	355040	+		25197	25595	16981	16991	28802	28802					0.08902039576844345
LAGLLVKR	8	Unmodified	_LAGLLVKR_					0	0	0			REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3001708984375	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.82419	1	7264	7264		13.775	0	1	1921500	+		25198	27846	16982	16992	28803	28803					0.14627262273359065
LAGLLVKR	8	Unmodified	_LAGLLVKR_					0	0	0			REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.30029296875	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.88915	1	8380	8380		35.201	8.4046	1	5485100	+		25199	27846	16982	16992	28804	28804					0.14627262273359065
LAGLLVKR	8	Unmodified	_LAGLLVKR_					0	0	0			REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2998352050781	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.86906	1	8548	8548		8.2313	0.54101	1	6323600	+		25200	27846	16982	16992	28805	28805					0.14627262273359065
LAGPLDLGG	9	Unmodified	_LAGPLDLGG_					0	0	0		ENST00000391711.7_1_19:37406109-37407159:-|nuORF	ENST00000391711.7_1_19:37406109-37407159:-|nuORF	ENST00000391711.7_1_19:37406109-37407159:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7289123535156	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.72402	1	7506	7506		38.806	3.1879	1	159770			25201	10998	16983	16993	28806	28806					0.03070424460383947
LAGPLHTI	8	Unmodified	_LAGPLHTI_					0	0	0			REV__ENSG00000178732|ENST00000692618|GP5	REV__ENSG00000178732|ENST00000692618|GP5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.17572021484375	2	411.247621	820.480688	-1.9176	-0.00078861	-4.1285	-0.0016978	-6.0461	-0.0024865	411.2457543948887	94.792	0.74723	94.994	94.444	95.191	0.20242					28	17	2	0	0	0	0.4196	1	9657	9657		44.531	16.277	1	117100	+		25202	22292	16984	16994	28807	28807					0.06326721076936792
LAGRKVLL	8	Unmodified	_LAGRKVLL_					0	0	0		ENSG00000160326|ENST00000371899|SLC2A6;ENST00000485978.1_1_9:136338979-136343630:-|nuORF;nc|ENSG00000160326|Q9UGQ3-2|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3000793457031	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.86288	1	6743	6743		26.796	6.3143	1	1680500			25203	5582	16985	16995	28808	28808					0.14627262273359065
LAGRKVLL	8	Unmodified	_LAGRKVLL_					0	0	0		ENSG00000160326|ENST00000371899|SLC2A6;ENST00000485978.1_1_9:136338979-136343630:-|nuORF;nc|ENSG00000160326|Q9UGQ3-2|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3000793457031	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.83058	2	7110	7090;7110		12.959	0	1	1702600			25204	5582	16985	16995	28809;28810	28810					0.14627262273359065
LAGRKVLL	8	Unmodified	_LAGRKVLL_					0	0	0		ENSG00000160326|ENST00000371899|SLC2A6;ENST00000485978.1_1_9:136338979-136343630:-|nuORF;nc|ENSG00000160326|Q9UGQ3-2|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3002014160156	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.83058	1	6998	6998		12.959	0	1	1921500			25205	5582	16985	16995	28811	28811					0.14627262273359065
LAGRLRSR	8	Unmodified	_LAGRLRSR_					0	0	0			REV__nc|ENSG00000166484|Q13164-3|MAPK7	REV__nc|ENSG00000166484|Q13164-3|MAPK7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7903137207031	2	464.793592	927.572632	-1.8726	-0.00087039	-4.4289	-0.0020585	-6.3015	-0.0029289	464.79142205700754	36.889	1.6787	36.889	35.761	37.439	0					76	39	3	0	0	0	0.80706	1	2129	2129		19.36	3.7238	1	196040	+		25206	27639	16986	16996	28812	28812					0.10594824213978882
LAGRLVSFLMD	11	Unmodified	_LAGRLVSFLMD_					0	0	0		nc|ENSG00000024526|Q5TB30-2|DEPDC1;chr1:68481612-68483950|63|143.13|0.32|8.79|-|ENST00000370966|DEPDC1,DEPDC1;ENSG00000024526|ENST00000456315|DEPDC1;ENST00000559530.1_1_15:32058089-32058740:-|nuORF;ENST00000488146.5_1_1:68942617-68947320:-|nuORF	nc|ENSG00000024526|Q5TB30-2|DEPDC1	nc|ENSG00000024526|Q5TB30-2|DEPDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.8931884765625	3	407.893519	1220.65873	-0.08762	-3.574E-05	-0.68665	-0.00028008	-0.77427	-0.00031582	407.8930586182869	80.735	0.90665	81.262	80.864	81.771	0.52676					55	21	4	0	0	0	0.68431	1	9306	9306		34.087	3.5176	1	989370			25207	55	16987	16997	28813	28813					0.05722603213803268
LAGRLVSFLMD	11	Unmodified	_LAGRLVSFLMD_					0	0	0		nc|ENSG00000024526|Q5TB30-2|DEPDC1;chr1:68481612-68483950|63|143.13|0.32|8.79|-|ENST00000370966|DEPDC1,DEPDC1;ENSG00000024526|ENST00000456315|DEPDC1;ENST00000559530.1_1_15:32058089-32058740:-|nuORF;ENST00000488146.5_1_1:68942617-68947320:-|nuORF	nc|ENSG00000024526|Q5TB30-2|DEPDC1	nc|ENSG00000024526|Q5TB30-2|DEPDC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	407.893519	1220.65873	-1.826	-0.00074483	-0.058829	-2.3996E-05	-1.8849	-0.00076882	407.89384154163463	81.495	0.89286	81.641	81.319	82.211	0.14512	0.19782	0.0012662	NaN	34.087	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	210990			25208	55	16987	16997							0.05722603213803268
LAGRLVSFLMD	11	Unmodified	_LAGRLVSFLMD_					0	0	0		nc|ENSG00000024526|Q5TB30-2|DEPDC1;chr1:68481612-68483950|63|143.13|0.32|8.79|-|ENST00000370966|DEPDC1,DEPDC1;ENSG00000024526|ENST00000456315|DEPDC1;ENST00000559530.1_1_15:32058089-32058740:-|nuORF;ENST00000488146.5_1_1:68942617-68947320:-|nuORF	nc|ENSG00000024526|Q5TB30-2|DEPDC1	nc|ENSG00000024526|Q5TB30-2|DEPDC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	407.893519	1220.65873	-1.6977	-0.00069248	-0.12637	-5.1546E-05	-1.8241	-0.00074403	407.8938204457466	81.476	0.77488	81.59	81.319	82.094	0.11426	0.14769	0.0011836	NaN	34.087	22	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141750			25209	55	16987	16997							0.05722603213803268
LAGRPPLW	8	Unmodified	_LAGRPPLW_					0	0	0			REV__ENST00000529747.5_1_8:144917834-144918303:-|nuORF	REV__ENST00000529747.5_1_8:144917834-144918303:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6083984375	2	455.268887	908.523222	-1.2196	-0.00055525	1.9367	0.00088172	0.71709	0.00032647	455.2699209761537	68.313	0.26461	68.448	68.32	68.584	0.13521					11	9	2	0	0	0	0.4196	1	6117	6117		4.3163	0	1	28462	+		25210	28230	16988	16998	28814	28814					0.06530116205169634
LAGSQQPI	8	Unmodified	_LAGSQQPI_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853698730469	2	407.226885	812.439217	0.12033	4.9002E-05	-0.24359	-9.9197E-05	-0.12326	-5.0195E-05	407.22652670776847	32.687	0.2691	32.797	32.705	32.974	0.10991					18	12	2	0	0	0	0.4196	1	1543	1543		24.203	2.2429	1	38613	+		25211	16216	16989	16999	28815	28815					0.025495403176250875
LAGSRGVPI	9	Unmodified	_LAGSRGVPI_					0	0	0			REV__nc|ENSG00000148408|Q00975-2|CACNA1B	REV__nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77960205078125	2	435.263802	868.513051	-0.049667	-2.1618E-05	0.039772	1.7311E-05	-0.0098955	-4.3071E-06	435.2637173452803	32.765	0.6795	32.892	32.634	33.313	0.12643					19	15	2	0	0	0	0.20789	1	2332	2332		42.396	9.5837	1	122300	+		25212	20117	16990	17000	28816	28816					0.07353508479945958
LAGTLIPAMA	10	Unmodified	_LAGTLIPAMA_					0	0	0		ENSG00000136869|ENST00000355622|TLR4	ENSG00000136869|ENST00000355622|TLR4	ENSG00000136869|ENST00000355622|TLR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2773132324219	2	479.275521	956.536489	0.53004	0.00025403	3.2196	0.0015431	3.7496	0.0017971	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.81018	1	8312	8312		38.806	0.99462	1	2070000			25213	4147	16991	17001	28817	28817					0.05648186202245142
LAGVIKRL	8	Unmodified	_LAGVIKRL_					0	0	0		nc|ENSG00000127955|P63096-2|GNAI1;ENSG00000127955|ENST00000649796|GNAI1;ENSG00000065135|ENST00000369851|GNAI3	nc|ENSG00000127955|P63096-2|GNAI1	nc|ENSG00000127955|P63096-2|GNAI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2998962402344	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81548	1	7293	7293		20.482	0	1	1921500			25214	1120	16992	17002	28818	28818					0.14627262273359065
LAGVKRLL	8	Unmodified	_LAGVKRLL_					0	0	0			REV__nc|ENSG00000166579|Q9GZM8-3|NDEL1	REV__nc|ENSG00000166579|Q9GZM8-3|NDEL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3002014160156	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.81548	1	6519	6519		20.482	0	1	2081500	+		25215	16662	16993	17003	28819	28819					0.14627262273359065
LAGVKRLL	8	Unmodified	_LAGVKRLL_					0	0	0			REV__nc|ENSG00000166579|Q9GZM8-3|NDEL1	REV__nc|ENSG00000166579|Q9GZM8-3|NDEL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2998046875	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.81548	1	6462	6462		20.482	0	1	1819800	+		25216	16662	16993	17003	28820	28820					0.14627262273359065
LAGVLLAF	8	Unmodified	_LAGVLLAF_					0	0	0			REV__nc|ENSG00000174672|Q8IWQ3-6|BRSK2	REV__nc|ENSG00000174672|Q8IWQ3-6|BRSK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.2525329589844	2	402.254914	802.495276	-1.9385	-0.00077976	-3.8503	-0.0015488	-5.7888	-0.0023286	402.25323570415725	20.33	0.48855	20.374	20.211	20.699	0.043747					36	23	2	0	0	0	0.80127	1	476	476		16.705	0	1	238530	+		25217	22007	16994	17004	28821	28821					0.0861279322508608
LAGVVKRAEQ	10	Unmodified	_LAGVVKRAEQ_					0	0	0			REV__nc|ENSG00000115705|P07202-8|TPO	REV__nc|ENSG00000115705|P07202-8|TPO	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.81396484375	2	535.819473	1069.62439	-0.57977	-0.00031065	-3.5	-0.0018754	-4.0797	-0.002186	535.8181488865579	99.613	1.3247	99.613	99.138	100.46	0					52	31	2	0	0	0	0.86047	1	10088	10088		23.523	3.5259	1	262870	+		25218	18145	16995	17005	28822	28822					0.09236523117237994
LAGYIAFD	8	Unmodified	_LAGYIAFD_					0	0	0		nc|ENSG00000157593|Q8TB61-3|SLC35B2;ENSG00000157593|ENST00000393812|SLC35B2;nc|ENSG00000157593|Q8TB61-5|SLC35B2;nc|ENSG00000157593|Q8TB61-4|SLC35B2	nc|ENSG00000157593|Q8TB61-3|SLC35B2	nc|ENSG00000157593|Q8TB61-3|SLC35B2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2239990234375	2	435.223811	868.433069	0.32239	0.00014031	-0.95539	-0.00041581	-0.633	-0.0002755	435.223399209331	94.324	0.97275	94.759	94.514	95.487	0.43539					50	24	3	0	0	0	0.89457	1	11283	11283		37.028	0	1	1317400			25219	5440	16996	17006	28823	28823					-0.006409779139062266
LAHHTPAP	8	Unmodified	_LAHHTPAP_					0	0	0			REV__ENST00000588254.1_1_19:56002502-56002919:+|nuORF	REV__ENST00000588254.1_1_19:56002502-56002919:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.22808837890625	2	422.22722	842.439886	-1.6467	-0.00069529	3.5886	0.0015152	1.9419	0.00081991	422.2286089277903	56.345	1.4516	56.345	54.998	56.45	0					98	47	3	0	0	0	0.86791	1	4810	4810		28.254	5.2118	1	495340	+		25220	29139	16997	17007	28824	28824					0.012363797573129887
LAHHTPAP	8	Unmodified	_LAHHTPAP_					0	0	0			REV__ENST00000588254.1_1_19:56002502-56002919:+|nuORF	REV__ENST00000588254.1_1_19:56002502-56002919:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.227294921875	2	422.22722	842.439886	-1.6383	-0.00069172	3.0629	0.0012932	1.4246	0.00060153	422.22843886781163	56.746	0.50715	56.746	56.45	56.957	0					41	24	2	0	0	0	0.82464	1	4845	4845		21.702	1.2205	1	414110	+		25221	29139	16997	17007	28825	28825					0.012363797573129887
LAHHTPAP	8	Unmodified	_LAHHTPAP_					0	0	0			REV__ENST00000588254.1_1_19:56002502-56002919:+|nuORF	REV__ENST00000588254.1_1_19:56002502-56002919:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.22381591796875	2	422.22722	842.439886	-0.93887	-0.00039642	2.144	0.00090525	1.2051	0.00050883	422.2280284167546	61.398	1.0667	61.414	61.239	62.306	0.015724					73	47	2	0	0	0	0.86791	1	5409	5409		28.254	1.4582	1	807210	+		25222	29139	16997	17007	28826	28826					0.012363797573129887
LAHIPYQP	8	Unmodified	_LAHIPYQP_					0	0	0			REV__ENST00000372070.7_1_1:46016592-46018115:+|nuORF	REV__ENST00000372070.7_1_1:46016592-46018115:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.7602233886719	2	469.758352	937.502152	0.22864	0.00010741	4.3938	0.002064	4.6224	0.0021714	469.7603126237485	40.263	1.3568	40.345	40.004	41.361	0.081345					62	45	2	0	0	0	0.87807	1	2578	2578		31.579	0	1	459690	+		25223	25705	16998	17008	28827	28827					0.030901061056624712
LAHLRGLPLLL	11	Unmodified	_LAHLRGLPLLL_					0	0	0			REV__nc|ENSG00000183146|Q9H606|PRORY	REV__nc|ENSG00000183146|Q9H606|PRORY	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5645446777344	3	405.936047	1214.78631	-1.859	-0.00075464	-2.9768	-0.0012084	-4.8358	-0.001963	405.9348420000159	63.591	0.35918	63.711	63.594	63.953	0.12004					25	17	2	0	0	0	0.17606	1	5561	5561		14.086	0	1	94573	+		25224	30084	16999	17009	28828	28828					0.18751111870187742
LAHSHRIKV	9	Unmodified	_LAHSHRIKV_					0	0	0			REV__ENSG00000140443|ENST00000650285|IGF1R	REV__ENSG00000140443|ENST00000650285|IGF1R	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8209838867188	2	530.82235	1059.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.341	1	84.489	83.989	84.989	0.14793								0	0	0	0.31437	1	8208	8208		25.574	6.2141	1		+		25225	19615	17000	17010	28829	28829					0.10271666419566827
LAIAGPLY	8	Unmodified	_LAIAGPLY_					0	0	0			REV__ENSG00000198515|ENST00000514170|CNGA1	REV__ENSG00000198515|ENST00000514170|CNGA1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.24676513671875	2	409.244547	816.47454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.55	1	16.939	16.439	17.439	-0.6107								0	0	0	0.29725	1	276	276		24.504	4.0222	1		+		25226	23334	17001	17011	28830	28830					0.058962028454288884
LAIALRWPG	9	Unmodified	_LAIALRWPG_					0	0	0		ENST00000430515.1_1_3:194476389-194476791:+|nuORF	ENST00000430515.1_1_3:194476389-194476791:+|nuORF	ENST00000430515.1_1_3:194476389-194476791:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.80328369140625	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.77546	1	4580	4580		31.955	8.9181	1	2702800			25227	11635	17002	17012	28831	28831					0.09366360785031702
LAIELLDKVNN	11	Unmodified	_LAIELLDKVNN_					0	0	0		nc|ENSG00000011566|Q8IVH8-3|MAP4K3;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;ENSG00000011566|ENST00000263881|MAP4K3	nc|ENSG00000011566|Q8IVH8-3|MAP4K3	nc|ENSG00000011566|Q8IVH8-3|MAP4K3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.91119384765625	3	414.574844	1240.7027	-0.11717	-4.8575E-05	4.4056	0.0018264	4.2884	0.0017779	414.5766103778177	67.467	0.8855	68.015	67.648	68.534	0.54819					37	20	2	0	0	0	0.41445	2	7394	7394;7404		58.246	24.16	1	248420			25228	794	17003	17013	28832;28833	28832					0.09197910911825602
LAIFDAVLTPF	11	Unmodified	_LAIFDAVLTPF_					0	0	0		ENSG00000230178|ENST00000456475|OR4F3;ENSG00000176269|ENST00000320901|OR4F21	ENSG00000230178|ENST00000456475|OR4F3	ENSG00000230178|ENST00000456475|OR4F3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.8408203125	2	603.842082	1205.66961	2.904	0.0017536	-1.9676	-0.0011881	0.93642	0.00056545	603.8408639395307	102.57	0.46542	102.86	102.51	102.98	0.29865					25	10	3	0	0	0	0.7342	1	12483	12483		25.574	1.3713	1	585380			25229	7069	17004	17014	28834	28834					0.07500328859737238
LAIHTGLEA	9	Unmodified	_LAIHTGLEA_					0	0	0			REV__nc|ENSG00000253953|Q9UN71-2|PCDHGB4	REV__nc|ENSG00000253953|Q9UN71-2|PCDHGB4	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	462.76141357421875	2	462.761092	923.507631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.007	1	48.029	47.529	48.529	0.02227								0	0	0	0.39224	1	3628	3628		53.351	1.0523	1		+		25230	23884	17005	17015	28835	28835					0.04281784897466423
LAIIIIALAI	10	Unmodified	_LAIIIIALAI_					0	0	0			REV__nc|ENSG00000166881|O14524-2|NEMP1	REV__nc|ENSG00000166881|O14524-2|NEMP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.3612060546875	2	512.362453	1022.71035	-0.13841	-7.0915E-05	-2.2699	-0.001163	-2.4083	-0.0012339	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.85108	1	7269	7269		19.36	6.4008	1	293160	+		25231	15550	17006	17016	28836	28836					0.19990714970015233
LAIKKNRFHIN	11	Unmodified	_LAIKKNRFHIN_					0	0	0		ENST00000274030.10_1_4:120160492-120160642:+|nuORF	ENST00000274030.10_1_4:120160492-120160642:+|nuORF	ENST00000274030.10_1_4:120160492-120160642:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.27886962890625	3	451.941973	1352.80409	-0.61036	-0.00027585	3.6213	0.0016366	3.0109	0.0013608	451.94349825987973	55.257	1.4276	55.22	54.668	56.095	-0.036823					123	46	4	0	0	0	0.76579	1	4614	4614		18.531	2.0012	1	459960			25232	9584	17007	17017	28837	28837					0.14179827125030897
LAIKKNRFHIN	11	Unmodified	_LAIKKNRFHIN_					0	0	0		ENST00000274030.10_1_4:120160492-120160642:+|nuORF	ENST00000274030.10_1_4:120160492-120160642:+|nuORF	ENST00000274030.10_1_4:120160492-120160642:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2762451171875	3	451.941973	1352.80409	-0.56282	-0.00025436	3.1394	0.0014188	2.5766	0.0011645	451.9432961289507	50.995	2.7237	51.43	49.805	52.529	0.43505					150	65	3	0	0	0	0.71803	1	5019	5019		28.577	9.6104	1	757900			25233	9584	17007	17017	28838	28838					0.14179827125030897
LAIPDLKL	8	Unmodified	_LAIPDLKL_					0	0	0			REV__ENST00000313871.8_1_X:1720532-1720865:+|nuORF	REV__ENST00000313871.8_1_X:1720532-1720865:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78765869140625	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.86288	1	2904	2904		26.796	1.3459	1	9571700	+		25234	24928	17008	17018	28839	28839					0.11308733942325944
LAIRIFFF	8	Unmodified	_LAIRIFFF_					0	0	0		ENST00000342374.4_1_20:43127230-43127344:-|nuORF	ENST00000342374.4_1_20:43127230-43127344:-|nuORF	ENST00000342374.4_1_20:43127230-43127344:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.807861328125	2	513.810388	1025.60622	-0.38547	-0.00019806	-2.1955	-0.001128	-2.5809	-0.0013261	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.81724	1	4053	4053		14.664	0.88877	1	1377600			25235	10259	17009	17019	28840	28840					0.0944443293317363
LAISATTY	8	Unmodified	_LAISATTY_					0	0	0			REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2267761230469	2	420.229094	838.443634	-1.3512	-0.00056782	-1.7107	-0.00071887	-3.0619	-0.0012867	420.2282629742312	76.938	2.2039	76.938	74.958	77.162	0					134	85	2	0	0	0	0.86288	1	6914	6914		26.796	6.3143	1	154140	+		25236	27775	17010	17020	28841	28841					0.01795004740506556
LAISATTY	8	Unmodified	_LAISATTY_					0	0	0			REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22711181640625	2	420.229094	838.443634	-1.3082	-0.00054975	-1.524	-0.00064043	-2.8322	-0.0011902	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.884	1	7380	7380		33.516	5.2613	1	419890	+		25237	27775	17010	17020	28842	28842					0.01795004740506556
LAISATTY	8	Unmodified	_LAISATTY_					0	0	0			REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2274475097656	2	420.229094	838.443634	-0.18765	-7.8855E-05	-2.6467	-0.0011122	-2.8344	-0.0011911	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.884	1	7925	7925		33.516	0	1	743780	+		25238	27775	17010	17020	28843	28843					0.01795004740506556
LAISATTY	8	Unmodified	_LAISATTY_					0	0	0			REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2261657714844	2	420.229094	838.443634	0.089833	3.775E-05	-2.9174	-0.001226	-2.8276	-0.0011882	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.88915	2	8217	7993;8217		40.573	4.9543	1	888480	+		25239	27775	17010	17020	28844;28845	28845					0.01795004740506556
LAISATTY	8	Unmodified	_LAISATTY_					0	0	0			REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.22747802734375	2	420.229094	838.443634	-1.7925	-0.00075327	-1.0357	-0.00043521	-2.8282	-0.0011885	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.91005	1	7406	7406		42.474	0.078325	1	831720	+		25240	27775	17010	17020	28846	28846					0.01795004740506556
LAISATTY	8	Unmodified	_LAISATTY_					0	0	0			REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.226318359375	2	420.229094	838.443634	-1.4714	-0.00061832	-1.5274	-0.00064185	-2.9988	-0.0012602	420.22834377301643	76.819	2.0914	76.909	74.945	77.036	0.089363					112	66	2	0	0	0	0.88915	1	7032	7032		35.201	0	1	246920	+		25241	27775	17010	17020	28847	28847					0.01795004740506556
LAISATTY	8	Unmodified	_LAISATTY_					0	0	0			REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.22735595703125	2	420.229094	838.443634	0.39025	0.000164	-3.4243	-0.001439	-3.034	-0.001275	420.2275761359418	78.73	4.4768	79.141	77.509	81.986	0.4106					178	106	2	0	0	0	0.88915	1	8946	8946		35.201	1.6851	1	423290	+		25242	27775	17010	17020	28848	28848					0.01795004740506556
LAISATTY	8	Unmodified	_LAISATTY_					0	0	0			REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	REV__ENST00000497691.5_1_6:3273291-3410459:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.22760009765625	2	420.229094	838.443634	0.042435	1.7832E-05	-3.1023	-0.0013037	-3.0599	-0.0012859	420.2277069932212	78.969	5.8282	79.518	76.332	82.16	0.54945					273	145	3	0	0	0	0.884	1	9188	9188		33.516	3.0119	1	581780	+		25243	27775	17010	17020	28849	28849					0.01795004740506556
LAISPIID	8	Unmodified	_LAISPIID_					0	0	0			REV__ENSG00000075673|ENST00000381946|ATP12A	REV__ENSG00000075673|ENST00000381946|ATP12A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.2544860839844	2	421.255111	840.49567	-1.7494	-0.00073696	-1.0287	-0.00043336	-2.7782	-0.0011703	421.25452750849325	84.126	1.3912	84.264	83.786	85.177	0.13811					78	31	3	0	0	0	0.85277	1	8191	8191		25.45	4.9683	1	553140	+		25244	16716	17011	17021	28850	28850					0.06904168154278523
LAISPVLGL	9	Unmodified	_LAISPVLGL_					0	0	0		nc|ENSG00000085563|P08183-2|ABCB1;ENSG00000085563|ENST00000622132|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.787841796875	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.5393	1	2874	2874		50.025	0	1	11085000			25245	1534	17012	17022	28851	28851					0.11308733942325944
LAISPVLGL	9	Unmodified	_LAISPVLGL_					0	0	0		nc|ENSG00000085563|P08183-2|ABCB1;ENSG00000085563|ENST00000622132|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7875061035156	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.7932	1	3553	3553		19.36	0	1	539980			25246	1534	17012	17022	28852	28852					0.11308733942325944
LAISPVLGL	9	Unmodified	_LAISPVLGL_					0	0	0		nc|ENSG00000085563|P08183-2|ABCB1;ENSG00000085563|ENST00000622132|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78790283203125	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.76996	1	2789	2789		33.516	0	1	14534000			25247	1534	17012	17022	28853	28853					0.11308733942325944
LAISPVLGL	9	Unmodified	_LAISPVLGL_					0	0	0		nc|ENSG00000085563|P08183-2|ABCB1;ENSG00000085563|ENST00000622132|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7882995605469	2	441.786579	881.558604	-1.4973	-0.00066148	4.3629	0.0019275	2.8656	0.001266	441.788391738542	44.7	2.6432	44.712	43.395	46.038	0.012058					134	65	3	0	0	0	0.72402	1	3146	3146		38.806	0	1	555340			25248	1534	17012	17022	28854	28854					0.11308733942325944
LAISPVLGL	9	Unmodified	_LAISPVLGL_					0	0	0		nc|ENSG00000085563|P08183-2|ABCB1;ENSG00000085563|ENST00000622132|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7875671386719	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.76402	1	2932	2932		35.201	1.6851	1	9571700			25249	1534	17012	17022	28855	28855					0.11308733942325944
LAISPVLGL	9	Unmodified	_LAISPVLGL_					0	0	0		nc|ENSG00000085563|P08183-2|ABCB1;ENSG00000085563|ENST00000622132|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7877197265625	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.76402	1	3277	3277		35.201	8.4046	1	403970			25250	1534	17012	17022	28856	28856					0.11308733942325944
LAIVYGPPAS	10	Unmodified	_LAIVYGPPAS_					0	0	0			REV__nc|ENSG00000165194|Q8TAB3-3|PCDH19	REV__nc|ENSG00000165194|Q8TAB3-3|PCDH19	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3005676269531	2	494.279118	986.543683	-0.67149	-0.0003319	1.285	0.00063517	0.61355	0.00030326	494.27991741816	97.181	0.54382	97.23	96.87	97.414	0.048157					22	12	3	0	0	0	0.37624	1	10360	10360		38.806	0	1	574530	+		25251	15940	17013	17023	28857	28857					0.0498724207432133
LAKEQRYQLRK	11	Unmodified	_LAKEQRYQLRK_					0	0	0			REV__ENSG00000135338|ENST00000369846|LCA5	REV__ENSG00000135338|ENST00000369846|LCA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.286865234375	3	478.284287	1431.83103	1.1166	0.00053405	-1.9	-0.00090873	-0.78338	-0.00037468	478.28312036659764	17.483	0.26408	17.001	16.851	17.115	-0.48256					8	5	3	0	0	0	0.76251	1	259	259		19.263	2.0959	1	47716	+		25252	19211	17014	17024	28858	28858					0.13238890945535786
LAKGGVRKVA	10	Unmodified	_LAKGGVRKVA_					0	0	0			REV__ENSG00000077454|ENST00000310300|LRCH4	REV__ENSG00000077454|ENST00000310300|LRCH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	499.8269348144531	2	499.827101	997.639649	-0.25611	-0.00012801	0.42976	0.0002148	0.17364	8.6791E-05	499.82722061420077	19.808	0.39669	19.738	19.583	19.979	-0.069735					19	12	2	0	0	0	0.85466	1	468	468		20.947	0	1	81978	+		25253	16748	17015	17025	28859	28859					0.1407343470508522
LAKIQERKRA	10	Unmodified	_LAKIQERKRA_					0	0	0			REV__ENSG00000206530|ENST00000393845|CFAP44	REV__ENSG00000206530|ENST00000393845|CFAP44	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.92254638671875	3	404.922689	1211.74624	2.788	0.0011289	-2.2292	-0.00090265	0.5588	0.00022627	404.92169157251993	26.492	2.181	26.459	26.021	28.202	-0.032125					96	52	4	0	0	0	0.85086	1	1185	1185		19.263	0.73163	1	297020	+		25254	23589	17016	17026	28860	28860					0.14883565199602344
LAKLDLPL	8	Unmodified	_LAKLDLPL_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2871398925781	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.82464	1	2950	2950		21.702	0	1	12471000	+		25255	16368	17017	17027	28861	28861					0.11308733942325944
LAKLEAQRKR	10	Unmodified	_LAKLEAQRKR_					0	0	0			REV__ENST00000492103.1_1_3:9822043-9829075:-|nuORF	REV__ENST00000492103.1_1_3:9822043-9829075:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.9227294921875	3	404.922689	1211.74624	-0.36148	-0.00014637	0.96527	0.00039086	0.60379	0.00024449	404.9229767423174	26.33	2.0851	26.291	25.89	27.975	-0.038523					105	48	5	0	0	0	0.86621	1	1159	1159		26.063	1.7875	1	394560	+		25256	21717	17018	17028	28862	28862					0.14883565199579607
LAKLFKIEGG	10	Unmodified	_LAKLFKIEGG_					0	0	0		ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3270874023438	2	538.329142	1074.64373	-1.4902	-0.0008022	-1.886	-0.0010153	-3.3762	-0.0018175	538.3280364010775	103.36	1.0546	103.48	103.07	104.12	0.11495					72	26	3	0	0	0	0.86698	1	10923	10923		28.081	0.19925	1	1412200			25257	6665	17019	17029	28863	28863					0.10939479408125408
LAKLGFLHQ	9	Unmodified	_LAKLGFLHQ_					0	0	0		ENSG00000179909|ENST00000684351|ZNF154	ENSG00000179909|ENST00000684351|ZNF154	ENSG00000179909|ENST00000684351|ZNF154	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8093872070312	2	513.808377	1025.6022	0.37872	0.00019459	0.75131	0.00038603	1.13	0.00058062	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.7932	1	4164	4164		21.96	0	1	971720			25258	7301	17020	17030	28864	28864					0.09042343439477918
LAKLLVIRTLW	11	Unmodified	_LAKLLVIRTLW_					0	0	0			REV__ENST00000566609.1_1_16:1002623-1020980:-|nuORF	REV__ENST00000566609.1_1_16:1002623-1020980:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.62908935546875	3	442.627102	1324.85948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.04	1	116.06	115.56	116.56	0.026466								0	0	0	0.56276	1	12742	12742		13.508	0.55046	1		+		25259	17398	17021	17031	28865	28865					0.21004240592787937
LAKMKPGTSF	10	Unmodified	_LAKMKPGTSF_					0	0	0			REV__ENST00000375286.7_1_17:73059974-73060100:+|nuORF	REV__ENST00000375286.7_1_17:73059974-73060100:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.3023071289062	2	540.299527	1078.5845	1.2647	0.0006833	3.9179	0.0021169	5.1826	0.0028002	540.301492421599	24.294	0.65065	23.781	23.494	24.144	-0.51365					30	14	3	0	0	0	0.86218	1	1180	1180		32.812	2.3088	1	313710	+		25260	25810	17022	17032	28866	28866					0.04835260122285945
LAKPGQFI	8	Unmodified	_LAKPGQFI_					0	0	0		nc|ENSG00000142657|P52209-2|PGD;ENSG00000142657|ENST00000270776|PGD	nc|ENSG00000142657|P52209-2|PGD	nc|ENSG00000142657|P52209-2|PGD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26800537109375	2	437.263271	872.511988	1.7622	0.00077054	3.9045	0.0017073	5.6667	0.0024778	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.86791	1	1057	1057		28.254	6.5519	1	1079000			25261	4578	17023	17033	28867	28867					0.07063294111037521
LAKPGQFI	8	Unmodified	_LAKPGQFI_					0	0	0		nc|ENSG00000142657|P52209-2|PGD;ENSG00000142657|ENST00000270776|PGD	nc|ENSG00000142657|P52209-2|PGD	nc|ENSG00000142657|P52209-2|PGD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2672424316406	2	437.263271	872.511988	1.7524	0.00076626	3.4445	0.0015062	5.1969	0.0022724	437.264848658338	24.04	1.4327	23.526	22.938	24.371	-0.51365					98	32	5	0	0	0	0.87276	1	1102	1102		29.842	0	1	13559000			25262	4578	17023	17033	28868	28868					0.07063294111037521
LAKQHGKAS	9	Unmodified	_LAKQHGKAS_					0	0	0			REV__ENSG00000172365|ENST00000641342|OR5B2	REV__ENSG00000172365|ENST00000641342|OR5B2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.2717590332031	2	470.272158	938.529764	-1.7118	-0.000805	1.6827	0.00079131	-0.029114	-1.3691E-05	470.2729404281299	92.166	2.8676	92.352	91.202	94.069	0.18582					129	67	3	0	0	0	0.75725	1	9313	9313		36.447	2.2742	1	1756700	+		25263	21825	17024	17034	28869	28869					0.05804009365908769
LAKQKYLK	8	Unmodified	_LAKQKYLK_					0	0	0		ENSG00000174502|ENST00000367135|SLC26A9;nc|ENSG00000174502|Q7LBE3-2|SLC26A9	ENSG00000174502|ENST00000367135|SLC26A9	ENSG00000174502|ENST00000367135|SLC26A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.82281494140625	2	496.318577	990.622602	1.025	0.00050873	-0.99495	-0.00049381	0.030054	1.4916E-05	496.3179405711803	19.445	0.27831	19.518	19.389	19.668	0.073465					13	8	2	0	0	0	0.80706	1	404	404		19.36	0	1	18515			25264	6942	17025	17035	28870	28870					0.12691514099265078
LAKQLKAFDS	10	Unmodified	_LAKQLKAFDS_					0	0	0			REV__ENSG00000167208|ENST00000330943|SNX20	REV__ENSG00000167208|ENST00000330943|SNX20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8201293945312	2	560.821681	1119.62881	-1.1548	-0.00064764	-2.2174	-0.0012436	-3.3722	-0.0018912	560.8203192234314	92.561	2.9962	92.631	91.312	94.308	0.06987					218	70	4	0	0	0	0.8651	1	9565	9565		25.574	1.0549	1	775670	+		25265	21368	17026	17036	28871	28871					0.07377987540144204
LAKRARNIVIA	11	Unmodified	_LAKRARNIVIA_					0	0	0			REV__nc|ENSG00000127125|Q9HAB8-2|PPCS	REV__nc|ENSG00000127125|Q9HAB8-2|PPCS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.9336853027344	3	408.934818	1223.78262	-1.9388	-0.00079284	-0.054927	-2.2462E-05	-1.9937	-0.0008153	408.93476832528296	16.248	0.87597	16.296	16.053	16.929	0.047802					86	39	4	0	0	0	0.78085	1	128	128		15.333	0.63944	1	909210	+		25266	18723	17027	17037	28872	28872					0.17968442096298531
LAKSSTTVSSF	11	Unmodified	_LAKSSTTVSSF_					0	0	0		nc|ENSG00000158290|Q13620|CUL4B;ENSG00000158290|ENST00000371322|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	nc|ENSG00000158290|Q13620|CUL4B	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	564.3206176757812	2	564.300778	1126.587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.681	1	55.78	55.28	56.28	0.099186								0	0	0	0.56276	1	4676	4676		35.152	5.982	1				25267	5469	17028	17038	28873	28873					0.028773870609711594
LAKVKKTLS	9	Unmodified	_LAKVKKTLS_					0	0	0			REV__ENSG00000130783|ENST00000253079|CCDC62	REV__ENSG00000130783|ENST00000253079|CCDC62	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.30078125	2	494.331685	986.648816	2.2923	0.0011332	2.7905	0.0013794	5.0829	0.0025126	494.333086347907	97.307	0.97016	97.251	96.975	97.945	-0.055542					30	22	2	0	0	0	0.20789	1	10546	10546		11.511	0	1	197050	+		25268	18909	17029	17039	28874	28874					0.1549578327076233
LAKVKKTLS	9	Unmodified	_LAKVKKTLS_					0	0	0			REV__ENSG00000130783|ENST00000253079|CCDC62	REV__ENSG00000130783|ENST00000253079|CCDC62	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3008728027344	2	494.331685	986.648816	-0.67133	-0.00033186	4.1775	0.0020651	3.5062	0.0017332	494.3338090829478	97.201	0.54382	97.249	96.87	97.414	0.048157					21	12	3	0	0	0	0.20789	1	10289	10289		10.866	0	1	238000	+		25269	18909	17029	17039	28875	28875					0.1549578327076233
LAKWQATKAM	10	Unmodified	_LAKWQATKAM_					0	0	0			REV__ENSG00000033867|ENST00000454389|SLC4A7	REV__ENSG00000033867|ENST00000454389|SLC4A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3195190429688	2	574.318251	1146.62195	0.59156	0.00033974	1.5937	0.00091529	2.1853	0.001255	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.80179	1	9704	9704		39.253	2.8061	1	1777600	+		25270	16283	17030	17040	28876	28876					0.05450351387889896
LALAKKGQV	9	Unmodified	_LALAKKGQV_					0	0	0			REV__ENST00000444078.5_1_2:231774643-231775150:-|nuORF	REV__ENST00000444078.5_1_2:231774643-231775150:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.301025390625	2	464.302927	926.591301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.993	1	46.036	45.536	46.536	0.042599								0	0	0	0.32469	1	3350	3350		21.96	0.25755	1		+		25271	26782	17031	17041	28877	28877					0.12506941065191768
LALARGLWP	9	Unmodified	_LALARGLWP_					0	0	0		ENST00000371025.7_1_20:57876485-57899387:+|nuORF;ENST00000395654.3_1_20:57876485-57899419:+|nuORF;ENST00000311585.11_1_20:57876485-57897473:+|nuORF	ENST00000371025.7_1_20:57876485-57899387:+|nuORF	ENST00000371025.7_1_20:57876485-57899387:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.8035888671875	2	498.803094	995.591636	-1.4653	-0.00073091	2.6111	0.0013024	1.1457	0.00057149	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.78058	1	4376	4376		30.504	3.7075	1	2964600			25272	9930	17032	17042	28878	28878					0.09366360785031702
LALARGLWP	9	Unmodified	_LALARGLWP_					0	0	0		ENST00000371025.7_1_20:57876485-57899387:+|nuORF;ENST00000395654.3_1_20:57876485-57899419:+|nuORF;ENST00000311585.11_1_20:57876485-57897473:+|nuORF	ENST00000371025.7_1_20:57876485-57899387:+|nuORF	ENST00000371025.7_1_20:57876485-57899387:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.80633544921875	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.7932	1	4337	4337		24.203	1.1603	1	2538600			25273	9930	17032	17042	28879	28879					0.09366360785031702
LALASPMIAP	10	Unmodified	_LALASPMIAP_					0	0	0		ENSG00000196531|ENST00000454682|NACA;nc|ENSG00000196531|E9PAV3-2|NACA	ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.78985595703125	2	492.283346	982.552139	5.5423	0.0027284	3.7106	0.0018267	9.253	0.0045551	492.2850026312267	110.46	0.92664	110.53	110.23	111.16	0.068001					58	34	2	0	0	0	0.86452	1	13448	13448		30.504	0.18592	1	236270			25274	8069	17033	17043	28880	28880					0.06016472719306876
LALAVSLPSLI	11	Unmodified	_LALAVSLPSLI_					0	0	0			REV__CON__P28800	REV__CON__P28800	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.8511962890625	2	548.85245	1095.69035	-1.5484	-0.00084986	2.0026	0.0010992	0.45421	0.0002493	548.8534163902094	40.343	1.3609	40.932	40.303	41.664	0.58915					102	36	4	0	0	0	0.6921	1	3422	3422		32.812	2.4947	1	5413900	+	+	25275	15988	17034	17044	28881	28881					0.14632919239443254
LALCPLRAGL	10	Unmodified	_LALCPLRAGL_					0	0	0			REV__ENST00000574902.5_1_16:3191344-3191665:+|nuORF	REV__ENST00000574902.5_1_16:3191344-3191665:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8084716796875	2	513.810062	1025.60557	-0.18035	-9.2668E-05	-2.1114	-0.0010849	-2.2917	-0.0011775	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.86718	1	4289	4289		27.882	3.6795	1	1777300	+		25276	28979	17035	17045	28882	28882					0.09379270221802471
LALEEIKLP	9	Unmodified	_LALEEIKLP_					0	0	0			REV__ENSG00000100813|ENST00000605057|ACIN1	REV__ENSG00000100813|ENST00000605057|ACIN1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3171997070312	2	513.3157	1024.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.856	1	53.851	53.351	54.351	-0.0053711								0	0	0	0.30416	1	4729	4729		29.15	0	1		+		25277	17222	17036	17046	28883	28883					0.10552370796949617
LALEIAALI	9	Unmodified	_LALEIAALI_					0	0	0			REV__ENSG00000023839|ENST00000647814|ABCC2	REV__ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80047607421875	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	1	2778	2778		18.324	5.3652	1	489490	+		25278	16253	17037	17047	28884	28884					0.11905003113804469
LALELALTL	9	Unmodified	_LALELALTL_					0	0	0		nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8056640625	2	478.804968	955.595384	-0.91897	-0.00044001	3.0146	0.0014434	2.0957	0.0010034	478.8062344602325	41.651	1.2493	41.655	41.077	42.326	0.0044022					74	33	3	0	0	0	0.7932	1	2753	2753		16.473	1.809	1	258200			25279	14984	17038	17048	28885	28885					0.11580985768216578
LALFPGVAL	9	Unmodified	_LALFPGVAL_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.78179931640625	2	450.781296	899.54804	0.82546	0.0003721	-0.64562	-0.00029103	0.17985	8.1071E-05	450.7808574876532	99.99	0.8277	100.32	99.935	100.76	0.33295					45	20	3	0	0	0	0.36201	1	12080	12080		60.404	0	1	662070			25280	6260	17039	17049	28886	28886					0.09424751287883737
LALFPGVAL	9	Unmodified	_LALFPGVAL_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.7819519042969	2	450.781296	899.54804	2.0752	0.00093547	-1.847	-0.00083258	0.22826	0.00010289	450.7803121682169	100.02	0.91292	100.37	99.985	100.9	0.3459					49	22	3	0	0	0	0.36201	1	12130	12130		60.404	11.193	1	893820			25281	6260	17039	17049	28887	28887					0.09424751287883737
LALGEPDLI	9	Unmodified	_LALGEPDLI_					0	0	0			REV__ENSG00000108592|ENST00000427159|FTSJ3	REV__ENSG00000108592|ENST00000427159|FTSJ3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7690124511719	2	470.771126	939.527698	-0.61958	-0.00029168	-3.7102	-0.0017466	-4.3297	-0.0020383	470.76921161929545	80.792	0.73714	81.319	80.992	81.729	0.52677					43	17	3	0	0	0	0.69914	1	9362	9362		40.573	6.4001	1	1161600	+		25282	17725	17040	17050	28888	28888					0.05551535837423671
LALGLGWTCFS	11	Unmodified	_LALGLGWTCFS_					0	0	0			REV__ENST00000380237.5_1_11:5289584-5289665:-|nuORF	REV__ENST00000380237.5_1_11:5289584-5289665:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.818115234375	2	584.296985	1166.57942	-0.34411	-0.00020106	-0.17703	-0.00010344	-0.52113	-0.0003045	584.2988622760629	76.093	0.68468	76.662	76.392	77.077	0.56836					56	17	5	0	0	0	0.17359	1	8651	8651		34.173	5.023	1	747270	+		25283	25942	17041	17051	28889	28889					0.0027895625967175874
LALGPLLSV	9	Unmodified	_LALGPLLSV_					0	0	0			REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7881774902344	2	441.786579	881.558604	0.94148	0.00041593	1.9016	0.00084012	2.8431	0.001256	441.78713404508295	46.639	1.7626	46.635	45.793	47.556	-0.0041618					69	44	3	0	0	0	0.7932	1	3706	3706		13.775	0	1	286840	+		25284	27741	17042	17052	28890	28890					0.11308733942337312
LALGPLLSV	9	Unmodified	_LALGPLLSV_					0	0	0			REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	441.786579	881.558604	-1.7865	-0.00078926	4.8477	0.0021417	3.0612	0.0013524	441.7885259311131	46.47	1.6357	46.47	45.779	47.415	0	0.057974	0.00088456	NaN	13.775	100	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	283320	+		25285	27741	17042	17052							0.11308733942337312
LALGPLLSV	9	Unmodified	_LALGPLLSV_					0	0	0			REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	441.786579	881.558604	-0.87889	-0.00038828	3.3951	0.0014999	2.5162	0.0011116	441.78776109947887	46.339	1.7221	46.31	45.843	47.565	-0.028782	-0.10224	-0.00039894	NaN	13.775	76	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	247520	+		25286	27741	17042	17052							0.11308733942337312
LALGPLLSV	9	Unmodified	_LALGPLLSV_					0	0	0			REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	441.786579	881.558604	0.94148	0.00041593	1.9016	0.00084012	2.8431	0.001256	441.78713404508295	46.639	1.7626	46.635	45.793	47.556	-0.0041618	0.2227	-0.0017185	NaN	13.775	69	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	286840	+		25287	27741	17042	17052							0.11308733942337312
LALGPLLSV	9	Unmodified	_LALGPLLSV_					0	0	0			REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	441.786579	881.558604	0.25413	0.00011227	2.4206	0.0010694	2.6747	0.0011816	441.78742516311974	46.357	1.7151	46.395	45.85	47.565	0.038185	-0.016877	-0.00126	NaN	13.775	73	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217770	+		25288	27741	17042	17052							0.11308733942337312
LALGPLLSV	9	Unmodified	_LALGPLLSV_					0	0	0			REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	REV__ENST00000495684.2_1_1:222988414-223164068:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	441.786579	881.558604	-0.31969	-0.00014123	3.3228	0.001468	3.0031	0.0013267	441.78786508061904	46.33	0.92046	46.251	45.799	46.72	-0.079002	-0.16156	-0.00046285	NaN	13.775	58	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	219630	+		25289	27741	17042	17052							0.11308733942337312
LALHNMVQ	8	Unmodified	_LALHNMVQ_					0	0	0		nc|ENSG00000104447|Q9UHF7|TRPS1;nc|ENSG00000104447|Q9UHF7-3|TRPS1;ENSG00000104447|ENST00000395715|TRPS1	nc|ENSG00000104447|Q9UHF7|TRPS1	nc|ENSG00000104447|Q9UHF7|TRPS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.2560119628906	2	463.249837	924.485122	0.63977	0.00029637	-1.2279	-0.00056884	-0.58816	-0.00027247	463.24924003943437	50.203	0.57053	51.048	50.724	51.295	0.84501					23	13	2	0	0	0	0.4196	1	4925	4925		35.201	19.559	1	673310			25290	2133	17043	17053	28891	28891					0.019858622282185934
LALIIGLSVG	10	Unmodified	_LALIIGLSVG_					0	0	0		nc|ENSG00000166900|Q13277-2|STX3;ENSG00000166900|ENST00000337979|STX3	nc|ENSG00000166900|Q13277-2|STX3	nc|ENSG00000166900|Q13277-2|STX3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.804443359375	2	478.312961	954.611368	-0.94284	-0.00045097	3.5259	0.0016865	2.583	0.0012355	478.3144596532281	37.106	2.4774	37.053	36.426	38.903	-0.053555					82	55	3	0	0	0	0.37624	1	2676	2676		24.203	0	1	82339			25291	6244	17044	17054	28892	28892					0.13224692005132965
LALIKKVHV	9	Unmodified	_LALIKKVHV_					0	0	0		nc|ENSG00000165891|Q96AV8-2|E2F7;nc|ENSG00000165891|Q96AV8-3|E2F7;ENSG00000165891|ENST00000322886|E2F7	nc|ENSG00000165891|Q96AV8-2|E2F7	nc|ENSG00000165891|Q96AV8-2|E2F7	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.8525695800781	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.17	1	112.11	111.61	112.61	-0.063889								0	0	0	0.36143	1	12196	12196		3.9852	0	1				25292	6132	17045	17055	28893	28893					0.1764807988731718
LALIVCKN	8	Carbamidomethyl (C)	_LALIVC(Carbamidomethyl (C))KN_	LALIVC(1)KN		LALIVC(42)KN		0	1	0			REV__nc|ENSG00000260916|Q9ULG6-2|CCPG1	REV__nc|ENSG00000260916|Q9ULG6-2|CCPG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7775573730469	2	465.775688	929.536823	-0.22002	-0.00010248	4.439	0.0020676	4.2189	0.0019651	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.91005	1	9661	9661		42.474	7.2737	1	1042300	+		25293	23940	17046	17056	28894	28894	292				0.06923605922111165
LALKELIHNSK	11	Unmodified	_LALKELIHNSK_					0	0	0			REV__ENSG00000184445|ENST00000333479|KNTC1	REV__ENSG00000184445|ENST00000333479|KNTC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.22784423828125	3	422.590717	1264.75032	1.4223	0.00060106	2.9826	0.0012604	4.4049	0.0018615	422.59189532894317	65.1	0.88902	65.127	64.406	65.295	0.027138					37	27	2	0	0	0	0.17882	1	6085	6085		11.455	0	1	62327	+		25294	22677	17047	17057	28895	28895					0.12853609902640528
LALKELIHNSK	11	Unmodified	_LALKELIHNSK_					0	0	0			REV__ENSG00000184445|ENST00000333479|KNTC1	REV__ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59259033203125	3	422.590717	1264.75032	0.27263	0.00011521	4.3666	0.0018453	4.6392	0.0019605	422.5924825344156	49.575	1.8502	49.617	48.754	50.604	0.04224					166	47	4	0	0	0	0.73647	1	3842	3842		25.068	0.83596	1	2165700	+		25295	22677	17047	17057	28896	28896					0.12853609902640528
LALKELIHNSK	11	Unmodified	_LALKELIHNSK_					0	0	0			REV__ENSG00000184445|ENST00000333479|KNTC1	REV__ENSG00000184445|ENST00000333479|KNTC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	422.590717	1264.75032	-0.18774	-7.9336E-05	3.9597	0.0016733	3.772	0.001594	422.5922991223435	65.423	0.19326	65.428	65.263	65.456	0.0046997	0.183	0.00084262	NaN	23.514	9	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55645	+		25296	22677	17047	17057							0.12853609902640528
LALKELIHNSK	11	Unmodified	_LALKELIHNSK_					0	0	0			REV__ENSG00000184445|ENST00000333479|KNTC1	REV__ENSG00000184445|ENST00000333479|KNTC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	422.590717	1264.75032	-0.37814	-0.0001598	4.351	0.0018387	3.9728	0.0016789	422.92682060945236	65.214	0.091713	65.18	65.104	65.196	-0.034798	-0.065387	0.0013386	NaN	23.514	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35032	+		25297	22677	17047	17057							0.12853609902640528
LALKHYLLKP	10	Unmodified	_LALKHYLLKP_					0	0	0		ENST00000451107.3_1_12:95475298-95611245:-|nuORF;nc|ENSG00000180263|Q6ZV73-2|FGD6;ENSG00000180263|ENST00000343958|FGD6	ENST00000451107.3_1_12:95475298-95611245:-|nuORF	ENST00000451107.3_1_12:95475298-95611245:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.3807983398438	2	598.381709	1194.74886	0.38806	0.00023221	-0.44171	-0.00026431	-0.053644	-3.2099E-05	598.3812845043491	40.552	1.126	40.504	40.15	41.276	-0.04789					105	43	3	0	0	0	0.85958	1	2562	2562		15.642	0	1	664060			25298	7322	17048	17058	28897	28897					0.15928020604542326
LALKVPCRP	9	Unmodified	_LALKVPCRP_					0	0	0		ENST00000586291.1_1_19:1816366-1816758:-|nuORF	ENST00000586291.1_1_19:1816366-1816758:-|nuORF	ENST00000586291.1_1_19:1816366-1816758:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	499.3071594238281	2	498.80478	995.595007	-0.60409	-0.00030132	-1.5516	-0.00077395	-2.1557	-0.0010753	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.77546	1	4103	4103		31.955	7.7521	1	2424700			25299	14162	17049	17059	28898	28898					0.09703287567378993
LALLLLPDAVP	11	Unmodified	_LALLLLPDAVP_					0	0	0		ENST00000374466.3_1_10:43679009-43679120:+|nuORF	ENST00000374466.3_1_10:43679009-43679120:+|nuORF	ENST00000374466.3_1_10:43679009-43679120:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.8579711914062	2	567.860275	1133.706	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.813	1	64.937	64.437	65.437	0.12397								0	0	0	0.56276	1	5739	5739		19.997	0.89325	1				25300	10779	17050	17060	28899	28899					0.1444920575645483
LALLLPLSS	9	Unmodified	_LALLLPLSS_					0	0	0			REV__ENSG00000174808|ENST00000395743|BTC	REV__ENSG00000174808|ENST00000395743|BTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.80035400390625	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	1	3338	3338		20.482	0	1	1294000	+		25301	22017	17051	17061	28900	28900					0.11905003113804469
LALLMWYV	8	Unmodified	_LALLMWYV_					0	0	0		ENSG00000198888|ENST00000361390|MT-ND1	ENSG00000198888|ENST00000361390|MT-ND1	ENSG00000198888|ENST00000361390|MT-ND1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3477478027344	2	504.782982	1007.55141	1.8259	0.00092168	1.026	0.00051791	2.8519	0.0014396	505.2851874102303	34.317	0.85591	34.622	34.241	35.097	0.30494					39	20	4	0	0	0	0.4196	1	2621	2621		33.493	3.6514	1	241490			25302	8360	17052	17062	28901	28901					0.04793678070245733
LALLPGRAW	9	Unmodified	_LALLPGRAW_					0	0	0			REV__ENST00000484546.1_1_9:123151516-123165527:-|nuORF	REV__ENST00000484546.1_1_9:123151516-123165527:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.80517578125	2	498.803094	995.591636	0.36192	0.00018053	0.83184	0.00041492	1.1938	0.00059545	498.8033596820182	51.857	1.6149	51.917	51.457	53.072	0.059719					144	50	4	0	0	0	0.67235	1	4285	4285		42.474	8.9589	1	2712200	+		25303	27513	17053	17063	28902	28902					0.09366360785031702
LALLPRWN	8	Unmodified	_LALLPRWN_					0	0	0		ENST00000262461.6_1_5:127523892-127524048:+|nuORF	ENST00000262461.6_1_5:127523892-127524048:+|nuORF	ENST00000262461.6_1_5:127523892-127524048:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7952880859375	2	491.795269	981.575986	-2.2672	-0.001115	3.2317	0.0015893	0.96443	0.0004743	491.79705126035327	67.243	0.7262	67.272	67.037	67.763	0.028587					47	29	2	0	0	0	0.87276	1	6381	6381		29.842	0	1	84975			25304	9440	17054	17064	28903	28903					0.08446074267988024
LALLRPQCL	9	Unmodified	_LALLRPQCL_					0	0	0			REV__ENST00000293190.9_1_17:72838445-72839279:-|nuORF	REV__ENST00000293190.9_1_17:72838445-72839279:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8087768554688	2	513.810062	1025.60557	0.034734	1.7846E-05	-2.0578	-0.0010573	-2.0231	-0.0010395	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.77546	1	4465	4465		31.955	1.4512	1	666950	+		25305	24683	17055	17065	28904	28904					0.09379270221802471
LALLSPLSL	9	Unmodified	_LALLSPLSL_					0	0	0		ENSG00000134013|ENST00000389131|LOXL2	ENSG00000134013|ENST00000389131|LOXL2	ENSG00000134013|ENST00000389131|LOXL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.7991943359375	2	463.799686	925.584819	-0.080206	-3.7199E-05	1.9522	0.00090541	1.8719	0.00086821	463.80040731335265	41.41	1.3196	41.365	40.954	42.273	-0.045467					80	38	3	0	0	0	0.7932	2	2675	2675;2685		23.042	0	1	417210			25306	3904	17056	17066	28905;28906	28905					0.11905003113804469
LALLTTSR	8	Unmodified	_LALLTTSR_					0	0	0			REV__ENSG00000182450|ENST00000422670|KCNK4	REV__ENSG00000182450|ENST00000422670|KCNK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7721252441406	2	437.77146	873.528367	0.50846	0.00022259	-0.059384	-2.5997E-05	0.44908	0.00019659	437.77135668139107	21.486	0.54584	21.042	20.78	21.326	-0.44324					19	12	2	0	0	0	0.80963	1	803	803		15.636	0.97212	1	44934	+		25307	22524	17057	17067	28907	28907					0.0865437527713766
LALMLAKN	8	Unmodified	_LALMLAKN_					0	0	0		ENSG00000167207|ENST00000647318|NOD2;nc|ENSG00000167207|Q9HC29|NOD2	ENSG00000167207|ENST00000647318|NOD2	ENSG00000167207|ENST00000647318|NOD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2654113769531	2	437.264956	872.515359	0.61137	0.00026733	1.1908	0.00052067	1.8021	0.00078801	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.81548	1	983	983		20.482	0	1	1313200			25308	6277	17058	17068	28908	28908					0.07400220893396181
LALPCLARGL	10	Unmodified	_LALPCLARGL_					0	0	0			REV__ENST00000372190.7_1_9:134585039-134585108:-|nuORF	REV__ENST00000372190.7_1_9:134585039-134585108:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.80859375	2	513.810062	1025.60557	-0.38907	-0.00019991	-1.6263	-0.0008356	-2.0153	-0.0010355	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.86589	1	3620	3620		29.15	0	1	1358900	+		25309	25709	17059	17069	28909	28909					0.09379270221802471
LALPCLARGL	10	Unmodified	_LALPCLARGL_					0	0	0			REV__ENST00000372190.7_1_9:134585039-134585108:-|nuORF	REV__ENST00000372190.7_1_9:134585039-134585108:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8088989257812	2	513.810062	1025.60557	-0.15906	-8.1728E-05	-1.9421	-0.00099788	-2.1012	-0.0010796	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.85694	2	3636	3636;3713		35.618	0	1	1484700	+		25310	25709	17059	17069	28910;28911	28910					0.09379270221802471
LALPCLARGL	10	Unmodified	_LALPCLARGL_					0	0	0			REV__ENST00000372190.7_1_9:134585039-134585108:-|nuORF	REV__ENST00000372190.7_1_9:134585039-134585108:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.808837890625	2	513.810062	1025.60557	-0.57846	-0.00029722	-1.0066	-0.00051719	-1.585	-0.00081441	513.8095113148362	46.467	0.72382	47.39	47.191	47.915	0.92315					30	16	2	0	0	0	0.84112	1	4401	4401		37.159	0	1	5287500	+		25311	25709	17059	17069	28912	28912					0.09379270221802471
LALPCLARGL	10	Unmodified	_LALPCLARGL_					0	0	0			REV__ENST00000372190.7_1_9:134585039-134585108:-|nuORF	REV__ENST00000372190.7_1_9:134585039-134585108:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.80859375	2	513.810062	1025.60557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.025	1	46.92	46.42	47.42	0.89542								0	0	0	0.45132	1	4329	4329		37.159	0	1		+		25312	25709	17059	17069	28913	28913					0.09379270221802471
LALPGRQGRR	10	Unmodified	_LALPGRQGRR_					0	0	0		ENSG00000180878|ENST00000316375|C11orf42	ENSG00000180878|ENST00000316375|C11orf42	ENSG00000180878|ENST00000316375|C11orf42	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	562.3433227539062	2	562.343981	1122.67341	0.40646	0.00022857	-1.0806	-0.00060764	-0.6741	-0.00037907	562.3432469329894	90.325	4.336	90.539	89.434	93.77	0.21404					201	103	3	0	0	0	0.86218	1	9038	9038		32.812	2.4947	1	624710			25313	7353	17060	17070	28914	28914					0.11697856196838075
LALPKGKP	8	Unmodified	_LALPKGKP_					0	0	0			REV__ENST00000487953.1_1_1:233091430-233112053:+|nuORF	REV__ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7666320800781	2	412.273638	822.532724	0.22853	9.4216E-05	-4.1021	-0.0016912	-3.8735	-0.001597	412.2720431185982	44.672	1.2836	44.721	44.089	45.372	0.048996					51	30	3	0	0	0	0.4196	1	3086	3086		19.36	1.0356	1	1254900	+		25314	19251	17061	17071	28915	28915					0.1143588449069739
LALPKMKAS	9	Oxidation (M)	_LALPKM(Oxidation (M))KAS_		LALPKM(1)KAS		LALPKM(44)KAS	0	0	1		nc|ENSG00000185567|Q8IVF2-3|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2;nc|ENSG00000185567|Q8IVF2-2|AHNAK2	nc|ENSG00000185567|Q8IVF2-3|AHNAK2	nc|ENSG00000185567|Q8IVF2-3|AHNAK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906494140625	2	487.788795	973.563038	-0.085708	-4.1808E-05	3.6076	0.0017597	3.5219	0.0017179	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.64922	1	8145	8145		44.117	9.9443	1	514950			25315	7725	17062	17072	28916	28916		133			0.0751987509358969
LALPLIILVS	10	Unmodified	_LALPLIILVS_					0	0	0			REV__ENSG00000017483|ENST00000620913|SLC38A5	REV__ENSG00000017483|ENST00000620913|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3610229492188	2	526.359911	1050.70527	0.086645	4.5607E-05	2.1771	0.0011459	2.2637	0.0011915	526.3609236587663	33.368	2.0596	33.371	32.762	34.822	0.0030785					171	48	5	0	0	0	0.84874	1	2058	2058		18.324	6.1176	1	3096800	+		25316	16220	17063	17073	28917	28917					0.1819441110740172
LALPQRREWN	10	Unmodified	_LALPQRREWN_					0	0	0		ENST00000425350.1_1_13:49151308-49151716:-|nuORF	ENST00000425350.1_1_13:49151308-49151716:-|nuORF	ENST00000425350.1_1_13:49151308-49151716:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8629150390625	2	641.854378	1281.6942	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.96	1	114.94	114.44	115.44	-0.016441								0	0	0	0.45132	1	13859	13859		34.173	11.593	1				25317	11532	17064	17074	28918	28918					0.0646240178584776
LALPTSYV	8	Unmodified	_LALPTSYV_					0	0	0			REV__nc|ENSG00000185339|P20062-2|TCN2	REV__nc|ENSG00000185339|P20062-2|TCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.24505615234375	2	432.247286	862.48002	-0.59688	-0.000258	-3.4963	-0.0015113	-4.0932	-0.0017693	432.2456538119775	27.651	1.704	27.554	27.094	28.798	-0.096947					50	39	4	0	0	0	0.89457	1	1621	1621		37.028	3.5129	1	332260	+		25318	22761	17065	17075	28919	28919					0.04327881637232167
LALPVLPVLKV	11	Unmodified	_LALPVLPVLKV_					0	0	0			REV__ENST00000225964.9_1_17:48265286-48266811:-|nuORF	REV__ENST00000225964.9_1_17:48265286-48266811:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.4050903320312	2	581.40211	1160.78967	3.1561	0.001835	3.0363	0.0017653	6.1924	0.0036003	581.4037800744045	109.08	0.56081	109.05	108.67	109.23	-0.029381					55	22	3	0	0	0	0.77538	6	12091	12065;12074;12081;12091;12101;12113		16.473	9.2798	1	3840300	+		25319	24178	17066	17076	28920;28921;28922;28923;28924;28925	28923					0.21570361924159442
LALPVLPVLKV	11	Unmodified	_LALPVLPVLKV_					0	0	0			REV__ENST00000225964.9_1_17:48265286-48266811:-|nuORF	REV__ENST00000225964.9_1_17:48265286-48266811:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.9093017578125	2	581.40211	1160.78967	4.6157	0.0026836	0.040698	2.3662E-05	4.6564	0.0027072	581.4031270142407	109	0.5882	109.09	108.69	109.28	0.090057					61	26	3	0	0	0	0.77538	2	13267	13260;13267		16.473	3.514	1	1567600	+		25320	24178	17066	17076	28926;28927	28927					0.21570361924159442
LALPVLPVLKV	11	Unmodified	_LALPVLPVLKV_					0	0	0			REV__ENST00000225964.9_1_17:48265286-48266811:-|nuORF	REV__ENST00000225964.9_1_17:48265286-48266811:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	581.40211	1160.78967	3.1561	0.001835	3.0363	0.0017653	6.1924	0.0036003	581.4037800744045	109.08	0.56081	109.05	108.67	109.23	-0.029381	0.025453	-0.0023609	NaN	16.473	55	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3840300	+		25321	24178	17066	17076							0.21570361924159442
LALPVLPVLKV	11	Unmodified	_LALPVLPVLKV_					0	0	0			REV__ENST00000225964.9_1_17:48265286-48266811:-|nuORF	REV__ENST00000225964.9_1_17:48265286-48266811:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	581.40211	1160.78967	4.6157	0.0026836	0.040698	2.3662E-05	4.6564	0.0027072	581.4031270142407	109	0.5882	109.09	108.69	109.28	0.090057	0.071198	-0.0058442	NaN	16.473	61	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1567600	+		25322	24178	17066	17076							0.21570361924159442
LALPVNLRM	9	Unmodified	_LALPVNLRM_					0	0	0			REV__ENST00000470408.5_1_7:157060411-157060444:+|nuORF	REV__ENST00000470408.5_1_7:157060411-157060444:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8091430664062	2	513.810062	1025.60557	0.090876	4.6693E-05	-2.2226	-0.001142	-2.1317	-0.0010953	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.7932	1	4289	4289		24.203	2.2429	1	1448700	+		25323	27212	17067	17077	28928	28928					0.09379270221802471
LALQLSVYL	9	Unmodified	_LALQLSVYL_					0	0	0			REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.8169860839844	2	510.310418	1018.60628	0.61904	0.0003159	-0.34976	-0.00017848	0.26928	0.00013742	510.3100260358087	79.225	0.7446	79.363	79.045	79.789	0.13883					63	24	4	0	0	0	0.64922	1	7538	7538		44.117	0	1	424560	+		25324	16563	17068	17078	28929	28929					0.09772388142516775
LALQWRPL	8	Unmodified	_LALQWRPL_					0	0	0			REV__ENSG00000154174|ENST00000284320|TOMM70	REV__ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.8033142089844	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.86791	1	4250	4250		28.254	0	1	2538600	+		25325	20372	17069	17079	28930	28930					0.09366360785031702
LALRALQDPKK	11	Unmodified	_LALRALQDPKK_					0	0	0		ENSG00000203857|ENST00000369413|HSD3B1	ENSG00000203857|ENST00000369413|HSD3B1	ENSG00000203857|ENST00000369413|HSD3B1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.2667236328125	3	418.262712	1251.76631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.321	1	49.363	48.863	49.863	0.041523								0	0	0	0.56276	1	3812	3812		11.455	0.45641	1				25326	8396	17070	17080	28931	28931					0.15049316139516122
LALREAVSSN	10	Unmodified	_LALREAVSSN_					0	0	0		ENST00000295400.10_1_2:70677390-70677510:-|nuORF	ENST00000295400.10_1_2:70677390-70677510:-|nuORF	ENST00000295400.10_1_2:70677390-70677510:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.29296875	2	530.293288	1058.57202	1.6334	0.0008662	-1.7145	-0.0009092	-0.081076	-4.2994E-05	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.8545	1	10712	10712		36.447	0	1	1816400			25327	9717	17071	17081	28932	28932					0.04507939983614051
LALRGLQLLSK	11	Unmodified	_LALRGLQLLSK_					0	0	0		ENSG00000055163|ENST00000620254|CYFIP2;nc|ENSG00000055163|Q96F07|CYFIP2	ENSG00000055163|ENST00000620254|CYFIP2	ENSG00000055163|ENST00000620254|CYFIP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9293518066406	3	404.599324	1210.77614	-1.8868	-0.00076342	-0.87662	-0.00035468	-2.7635	-0.0011181	404.59901988415413	48.065	1.8782	48.087	47.749	49.627	0.02227					69	49	2	0	0	0	0.17289	1	3719	3719		21.78	7.6944	1	190280			25328	1025	17072	17082	28933	28933					0.17918504144927283
LALRLWPK	8	Unmodified	_LALRLWPK_					0	0	0		nc|ENSG00000167925|Q8N2G8-2|GHDC;nc|ENSG00000167925|Q8N2G8-3|GHDC;ENSG00000167925|ENST00000587427|GHDC	nc|ENSG00000167925|Q8N2G8-2|GHDC	nc|ENSG00000167925|Q8N2G8-2|GHDC	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.80340576171875	2	498.821287	995.628021	-0.60485	-0.00030171	3.8871	0.001939	3.2822	0.0016372	498.82438047726913	52.127	0.088058	52.167	52.097	52.186	0.040592					4	2	2	0	0	0	0.4196	1	4188	4188		13.775	0	1	27488			25329	6342	17073	17083	28934	28934					0.1300323768174394
LALSAKGR	8	Unmodified	_LALSAKGR_					0	0	0		ENSG00000185504|ENST00000327787|FAAP100;nc|ENSG00000185504|Q0VG06-3|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.59344482421875	2	408.25852	814.502486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.013	1	23.101	22.601	23.601	0.088013								0	0	0	0.29871	1	721	721		23.042	0	1				25330	7718	17074	17084	28935	28935					0.08781525825520475
LALSLLLFM	9	Unmodified	_LALSLLLFM_					0	0	0			REV__ENSG00000178172|ENST00000325630|SPINK6	REV__ENSG00000178172|ENST00000325630|SPINK6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.81219482421875	2	510.811739	1019.60893	2.0738	0.0010593	0.35505	0.00018136	2.4289	0.0012407	510.811728357041	106.1	0.82207	106.22	105.9	106.72	0.12742					79	35	3	0	0	0	0.76996	1	12972	12972		33.516	3.0119	1	1055000	+		25331	22261	17075	17085	28936	28936					0.09990520275823656
LALSSPRLL	9	Unmodified	_LALSSPRLL_					0	0	0		nc|ENSG00000114923|P48751-3|SLC4A3	nc|ENSG00000114923|P48751-3|SLC4A3	nc|ENSG00000114923|P48751-3|SLC4A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.3052673339844	2	485.30821	968.601866	0.22249	0.00010798	-0.53362	-0.00025897	-0.31113	-0.00015099	485.3077766764581	53.34	1.7499	53.754	53.332	55.082	0.4139					89	41	4	0	0	0	0.11055	1	5423	5423		90.37	5.209	1	3711300			25332	14857	17076	17086	28937	28937					0.11630923719621933
LALSTLPPA	9	Unmodified	_LALSTLPPA_					0	0	0		ENST00000342202.8_1_11:65360478-65360745:-|nuORF;ENSG00000173338|ENST00000340313|KCNK7	ENST00000342202.8_1_11:65360478-65360745:-|nuORF	ENST00000342202.8_1_11:65360478-65360745:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7865905761719	2	441.768386	881.522219	-1.3193	-0.00058283	-4.0255	-0.0017783	-5.3448	-0.0023612	441.7667333655584	40.807	0.24091	41.396	41.247	41.488	0.58915					10	6	2	0	0	0	0.20789	1	3518	3518		57.811	46.946	1	1365200			25333	6851	17077	17087	28938	28938					0.07671857045602337
LALTLTLFQ	9	Unmodified	_LALTLTLFQ_					0	0	0		nc|ENSG00000153956|P54289-4|CACNA2D1;nc|ENSG00000153956|P54289-5|CACNA2D1;nc|ENSG00000153956|P54289-3|CACNA2D1;ENSG00000153956|ENST00000356860|CACNA2D1;nc|ENSG00000153956|P54289|CACNA2D1	nc|ENSG00000153956|P54289-4|CACNA2D1	nc|ENSG00000153956|P54289-4|CACNA2D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.3117980957031	2	510.310418	1018.60628	-0.38342	-0.00019566	0.58095	0.00029646	0.19753	0.0001008	510.3105307146198	79.291	0.70142	79.422	79.091	79.792	0.13086					56	21	3	0	0	0	0.31972	1	7497	7497		63.306	2.3343	1	423200			25334	5248	17078	17088	28939	28939					0.09772388142528143
LALTVPVLT	9	Unmodified	_LALTVPVLT_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8007507324219	2	463.799686	925.584819	0.28206	0.00013082	1.3238	0.000614	1.6059	0.00074482	463.8001612881591	41.523	1.5134	41.492	41.236	42.75	-0.030991					87	37	3	0	0	0	0.78058	1	3043	3043		30.504	5.0535	1	527400			25335	8945	17079	17089	28940	28940					0.11905003113804469
LALTVPVLT	9	Unmodified	_LALTVPVLT_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.80023193359375	2	463.799686	925.584819	-1.1872	-0.0005506	2.6442	0.0012264	1.4571	0.00067579	463.80074391702703	41.648	1.5471	41.608	41.079	42.626	-0.039845					90	38	3	0	0	0	0.7932	2	3123	3123;3148		23.042	4.7181	1	510860			25336	8945	17079	17089	28941;28942	28941					0.11905003113804469
LALVANRLRAL	11	Unmodified	_LALVANRLRAL_					0	0	0			REV__ENST00000395029.5_1_5:133480490-133481991:+|nuORF	REV__ENST00000395029.5_1_5:133480490-133481991:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.92950439453125	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.76579	4	3586	3586;3604;3612;3702		18.531	4.445	1	2526100	+		25337	26097	17080	17090	28943;28944;28945;28946	28943					0.17569039722025082
LALVANRLRAL	11	Unmodified	_LALVANRLRAL_					0	0	0			REV__ENST00000395029.5_1_5:133480490-133481991:+|nuORF	REV__ENST00000395029.5_1_5:133480490-133481991:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9295349121094	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.78309	1	3822	3822		13.508	3.8618	1	2636600	+		25338	26097	17080	17090	28947	28947					0.17569039722025082
LALVANRLRAL	11	Unmodified	_LALVANRLRAL_					0	0	0			REV__ENST00000395029.5_1_5:133480490-133481991:+|nuORF	REV__ENST00000395029.5_1_5:133480490-133481991:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9295349121094	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.76579	3	3922	3912;3922;3948		18.531	6.1972	1	2612300	+		25339	26097	17080	17090	28948;28949;28950	28949					0.17569039722025082
LALVANRLRAL	11	Unmodified	_LALVANRLRAL_					0	0	0			REV__ENST00000395029.5_1_5:133480490-133481991:+|nuORF	REV__ENST00000395029.5_1_5:133480490-133481991:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9294738769531	3	403.931185	1208.77173	-1.8895	-0.00076324	-2.2243	-0.00089846	-4.1138	-0.0016617	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.74405	3	3493	3450;3460;3493		23.378	6.8481	1	2300300	+		25340	26097	17080	17090	28951;28952;28953	28953					0.17569039722025082
LALVANRLRAL	11	Unmodified	_LALVANRLRAL_					0	0	0			REV__ENST00000395029.5_1_5:133480490-133481991:+|nuORF	REV__ENST00000395029.5_1_5:133480490-133481991:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9295959472656	3	403.931185	1208.77173	-0.87886	-0.000355	-3.2249	-0.0013026	-4.1037	-0.0016576	403.9297749934075	46.008	1.1325	46.904	46.447	47.58	0.89542					87	27	4	0	0	0	0.70584	1	4276	4276		30.569	5.4429	1	2092900	+		25341	26097	17080	17090	28954	28954					0.17569039722025082
LALVDGVVD	9	Unmodified	_LALVDGVVD_					0	0	0			REV__ENST00000481917.5_1_2:239072313-239074302:+|nuORF	REV__ENST00000481917.5_1_2:239072313-239074302:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7532043457031	2	450.755475	899.496398	-1.4711	-0.00066312	-1.5388	-0.00069364	-3.01	-0.0013568	450.7547246648738	79.827	2.1578	79.926	78.179	80.337	0.098701					99	70	2	0	0	0	0.74721	1	7469	7469		37.159	3.6435	1	155440	+		25342	22293	17081	17091	28955	28955					0.042629628033296285
LALVKGRI	8	Unmodified	_LALVKGRI_					0	0	0			REV__nc|ENSG00000055917|Q8TB72-2|PUM2	REV__nc|ENSG00000055917|Q8TB72-2|PUM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3003234863281	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.81724	1	6595	6595		14.664	0	1	1852500	+		25343	16414	17082	17092	28956	28956					0.14627262273359065
LALVKGRI	8	Unmodified	_LALVKGRI_					0	0	0			REV__nc|ENSG00000055917|Q8TB72-2|PUM2	REV__nc|ENSG00000055917|Q8TB72-2|PUM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3002624511719	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81724	1	8673	8673		14.664	0	1	6323600	+		25344	16414	17082	17092	28957	28957					0.14627262273359065
LALVPLSTL	9	Unmodified	_LALVPLSTL_					0	0	0			REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8000793457031	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	2	3360	3360;3672		18.324	4.5491	1	1294000	+		25345	22662	17083	17093	28958;28959	28958					0.11905003113804469
LALVPLSTL	9	Unmodified	_LALVPLSTL_					0	0	0			REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8004455566406	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3556	3556		18.324	0	1	1516700	+		25346	22662	17083	17093	28960	28960					0.11905003113804469
LALVTLVPG	9	Unmodified	_LALVTLVPG_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.78778076171875	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.69914	1	2772	2772		40.573	5.3719	1	11085000	+		25347	17362	17084	17094	28961	28961					0.11308733942325944
LALVTLVPG	9	Unmodified	_LALVTLVPG_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7882995605469	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.7932	1	3573	3573		18.324	0.95945	1	325400	+		25348	17362	17084	17094	28962	28962					0.11308733942325944
LALVTLVPG	9	Unmodified	_LALVTLVPG_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7876892089844	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.76402	1	3678	3678		35.201	6.9464	1	539980	+		25349	17362	17084	17094	28963	28963					0.11308733942325944
LALVTLVPG	9	Unmodified	_LALVTLVPG_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7876892089844	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.7932	1	3543	3543		25.45	4.9683	1	493390	+		25350	17362	17084	17094	28964	28964					0.11308733942325944
LALVTLVPG	9	Unmodified	_LALVTLVPG_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7876281738281	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.64338	1	2687	2687		44.531	3.9584	1	10215000	+		25351	17362	17084	17094	28965	28965					0.11308733942325944
LALVTLVPG	9	Unmodified	_LALVTLVPG_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.787109375	2	441.786579	881.558604	-1.0238	-0.0004523	3.7443	0.0016542	2.7205	0.0012019	441.78803518939543	44.741	1.2608	45.205	44.578	45.839	0.46313					68	30	3	0	0	0	0.67235	1	4125	4125		42.474	15.678	1	1232600	+		25352	17362	17084	17094	28966	28966					0.11308733942325944
LALVTLVPG	9	Unmodified	_LALVTLVPG_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7857360839844	2	441.786579	881.558604	-1.3207	-0.00058348	2.7134	0.0011988	1.3927	0.00061528	441.78767453164585	40.807	2.1151	41.396	40.908	43.023	0.58915					198	57	5	0	0	0	0.7932	1	3617	3617		25.45	6.0902	1	200250000	+		25353	17362	17084	17094	28967	28967					0.11308733942325944
LALVTLVPG	9	Unmodified	_LALVTLVPG_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7878723144531	2	441.786579	881.558604	-0.95534	-0.00042206	3.5444	0.0015659	2.589	0.0011438	441.78790230844794	44.504	1.0553	45.349	44.694	45.749	0.84438					69	25	3	0	0	0	0.67235	2	4103	4090;4103		42.474	8.9589	1	1027900	+		25354	17362	17084	17094	28968;28969	28969					0.11308733942325944
LALVTLVPG	9	Unmodified	_LALVTLVPG_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	441.786579	881.558604	-1.0238	-0.0004523	3.7443	0.0016542	2.7205	0.0012019	441.78803518939543	44.741	1.2608	45.205	44.578	45.839	0.46313	-0.07209	7.9948E-05	NaN	42.474	68	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1232600	+		25355	17362	17084	17094							0.11308733942325944
LALVTLVPG	9	Unmodified	_LALVTLVPG_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	441.786579	881.558604	-0.95534	-0.00042206	3.5444	0.0015659	2.589	0.0011438	441.78790230844794	44.504	1.0553	45.349	44.694	45.749	0.84438	0.07209	-9.6706E-05	NaN	42.474	69	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1027900	+		25356	17362	17084	17094							0.11308733942325944
LALVYKALAS	10	Unmodified	_LALVYKALAS_					0	0	0			REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.82763671875	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.6116	14	10881	10689;10773;10785;10797;10809;10821;10833;10845;10857;10869;10881;10893;10917;10943		49.442	19.6	1	30867000	+		25357	19568	17085	17095	28970;28971;28972;28973;28974;28975;28976;28977;28978;28979;28980;28981;28982;28983	28980					0.11092077033822534
LALVYKALAS	10	Unmodified	_LALVYKALAS_					0	0	0			REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8276977539062	2	524.823692	1047.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.44	1	102.39	101.89	102.89	-0.047005								0	0	0	0.45132	1	11185	11185		34.173	8.7224	1		+		25358	19568	17085	17095	28984	28984					0.11092077033822534
LALVYLPG	8	Unmodified	_LALVYLPG_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;nc|ENSG00000105889|Q6NZ63|STEAP1B;ENSG00000105889|ENST00000678116|STEAP1B;ENST00000483679.1_1_7:22532171-22534501:-|nuORF;ENST00000475789.1_1_7:89789075-89791404:+|nuORF;nc|ENSG00000105889|Q6NZ63-2|STEAP1B;ENSG00000127954|ENST00000380079|STEAP4;ENST00000339570.9_1_12:125262502-125262823:-|nuORF	ENSG00000164647|ENST00000297205|STEAP1;ENST00000339570.9_1_12:125262502-125262823:-|nuORF	ENSG00000164647|ENST00000297205|STEAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	423.2593688964844	2	423.260197	844.50584	0.78672	0.00033299	-1.8847	-0.00079771	-1.0979	-0.00046472	423.2594053934692	21.391	1.0361	21.459	20.78	21.816	0.068251					65	37	3	0	0	0	0.88393	1	573	573		33.493	5.2387	1	69038			25359	5983;10224	17086	17096	28985	28985					0.07736775879504876
LAMPLLPII	9	Unmodified	_LAMPLLPII_					0	0	0			REV__nc|ENSG00000025770|Q6IBW4-2|NCAPH2	REV__nc|ENSG00000025770|Q6IBW4-2|NCAPH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.8158874511719	2	490.814282	979.614011	-0.13641	-6.6952E-05	2.455	0.001205	2.3186	0.001138	490.8153746767679	73.803	0.85621	74.362	74.024	74.881	0.55891					42	20	3	0	0	0	0.78292	1	8343	8343		29.842	3.1486	1	628450	+		25360	16259	17087	17097	28986	28986					0.1233882413845322
LAMVAVRQVF	10	Unmodified	_LAMVAVRQVF_					0	0	0			REV__ENST00000572179.5_1_17:3623679-3627129:-|nuORF	REV__ENST00000572179.5_1_17:3623679-3627129:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3298950195312	2	567.328619	1132.64269	-1.2006	-0.00068114	3.2187	0.0018261	2.0181	0.001145	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.86305	1	9717	9717		31.955	5.2619	1	15673000	+		25361	28925	17088	17098	28987	28987					0.08166941767581193
LAMVAVRQVF	10	Unmodified	_LAMVAVRQVF_					0	0	0			REV__ENST00000572179.5_1_17:3623679-3627129:-|nuORF	REV__ENST00000572179.5_1_17:3623679-3627129:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3300170898438	2	567.328619	1132.64269	0.79571	0.00045143	1.1706	0.0006641	1.9663	0.0011155	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.86452	1	9622	9622		30.504	0.18592	1	18145000	+		25362	28925	17088	17098	28988	28988					0.08166941767581193
LAMWKIPT	8	Unmodified	_LAMWKIPT_					0	0	0			REV__nc|ENSG00000065361|P21860-4|ERBB3	REV__nc|ENSG00000065361|P21860-4|ERBB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2741394042969	2	480.272781	958.531009	-0.38119	-0.00018308	2.636	0.001266	2.2548	0.0010829	480.27391781955924	47.288	1.5356	47.759	47.214	48.75	0.4714					83	37	3	0	0	0	0.73851	1	4472	4472		65.803	2.2693	1	9403900	+		25363	16497	17089	17099	28989	28989					0.05008507410445873
LANDRVPN	8	Unmodified	_LANDRVPN_					0	0	0		ENST00000582594.5_1_18:9547789-9550464:-|nuORF;ENST00000285124.12_1_18:9547789-9562973:-|nuORF;nc|ENSG00000154845|Q8TF05-2|PPP4R1;ENSG00000154845|ENST00000400556|PPP4R1	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2637023925781	2	449.740691	897.466829	-1.6054	-0.000722	1.2828	0.00057691	-0.32261	-0.00014509	449.7412812227856	29.419	0.60687	29.39	29.04	29.647	-0.029207					30	13	3	0	0	0	0.4196	1	1882	1882		24.203	15.971	1	114020			25364	5301	17090	17100	28990	28990					0.013994435778499792
LANERHSA	8	Unmodified	_LANERHSA_					0	0	0			REV__ENSG00000152818|ENST00000367545|UTRN	REV__ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.23162841796875	2	449.230491	896.446428	0.9656	0.00043378	-0.74303	-0.00033379	0.22258	9.9988E-05	449.2301030462438	83.133	5.5992	83.192	80.121	85.72	0.059158					204	132	2	0	0	0	0.87064	1	8317	8317		29.15	0.89528	1	221730	+		25365	20318	17091	17101	28991	28991					-0.0059372708195724044
LANKRFVF	8	Unmodified	_LANKRFVF_					0	0	0		nc|ENSG00000022267|Q13642-1|FHL1;ENSG00000022267|ENST00000370683|FHL1;nc|ENSG00000022267|Q13642-4|FHL1	nc|ENSG00000022267|Q13642-1|FHL1	nc|ENSG00000022267|Q13642-1|FHL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.79547119140625	2	497.795269	993.575986	-1.3956	-0.00069473	2.5991	0.0012938	1.2035	0.00059911	497.7963785016087	47.217	0.74612	47.689	47.3	48.047	0.4714					39	17	3	0	0	0	0.86288	1	4497	4497		26.796	1.3459	1	671490			25366	850	17092	17102	28992	28992					0.0789407426799471
LAPAPLPSITL	11	Unmodified	_LAPAPLPSITL_					0	0	0			REV__ENST00000524558.5_1_11:75274622-75277455:+|nuORF	REV__ENST00000524558.5_1_11:75274622-75277455:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8411865234375	2	546.8368	1091.65905	1.265	0.00069175	4.2188	0.002307	5.4838	0.0029987	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.72918	1	11136	11136		26.693	6.6961	1	39577000	+		25367	28167	17093	17103	28993	28993					0.11688346205323796
LAPAPPLAPAS	11	Unmodified	_LAPAPPLAPAS_					0	0	0		nc|ENSG00000080603|Q6ZRS2-3|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	502.813720703125	2	502.792392	1003.57023	0.77262	0.00038847	0.48348	0.00024309	1.2561	0.00063156	502.7925331169563	97.126	0.57558	97.29	97.095	97.671	0.16317					17	13	2	0	0	0	0.16498	1	10027	10027		51.335	10.557	1	121460			25368	1447	17094	17104	28994	28994					0.0685893096564314
LAPAQVRVVL	10	Unmodified	_LAPAQVRVVL_					0	0	0		ENST00000532469.1_1_11:65029724-65047127:+|nuORF	ENST00000532469.1_1_11:65029724-65047127:+|nuORF	ENST00000532469.1_1_11:65029724-65047127:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.3399658203125	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.85466	1	10165	10165		20.947	0.95016	1	1199500			25369	13378	17095	17105	28995	28995					0.1408658801931324
LAPARVFLN	9	Unmodified	_LAPARVFLN_					0	0	0			REV__ENST00000437198.6_1_16:14711485-14721018:-|nuORF	REV__ENST00000437198.6_1_16:14711485-14721018:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.7983093261719	2	500.800552	999.58655	-1.6124	-0.00080748	-4.0896	-0.0020481	-5.702	-0.0028556	500.79842715504543	94.334	1.559	94.532	94.244	95.803	0.19827					54	37	2	0	0	0	0.78058	1	9582	9582		30.504	3.8107	1	438210	+		25370	26481	17096	17106	28996	28996					0.08674056922427553
LAPAVGRPRR	10	Unmodified	_LAPAVGRPRR_					0	0	0			REV__ENST00000252136.11_2_22:20104550-20104601:-|nuORF	REV__ENST00000252136.11_2_22:20104550-20104601:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8402709960938	2	546.841074	1091.66759	-0.41161	-0.00022509	-2.2056	-0.0012061	-2.6172	-0.0014312	546.8400747085221	101.16	3.89	101.19	100.52	104.41	0.031036					283	93	6	0	0	0	0.85251	1	11072	11072		19.997	0.6368	1	40007000	+		25371	24290	17097	17107	28997	28997					0.12542757685173456
LAPAVGRPRR	10	Unmodified	_LAPAVGRPRR_					0	0	0			REV__ENST00000252136.11_2_22:20104550-20104601:-|nuORF	REV__ENST00000252136.11_2_22:20104550-20104601:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.841064453125	2	546.841074	1091.66759	0.19665	0.00010754	-2.8678	-0.0015682	-2.6712	-0.0014607	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.85939	1	10797	10797		23.042	3.6825	1	55511000	+		25372	24290	17097	17107	28998	28998					0.12542757685173456
LAPAVGRPRR	10	Unmodified	_LAPAVGRPRR_					0	0	0			REV__ENST00000252136.11_2_22:20104550-20104601:-|nuORF	REV__ENST00000252136.11_2_22:20104550-20104601:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8406372070312	2	546.841074	1091.66759	-1.4624	-0.00079971	-0.92504	-0.00050585	-2.3875	-0.0013056	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.86589	1	10738	10738		29.15	1.2673	1	44929000	+		25373	24290	17097	17107	28999	28999					0.12542757685173456
LAPAVGRPRR	10	Unmodified	_LAPAVGRPRR_					0	0	0			REV__ENST00000252136.11_2_22:20104550-20104601:-|nuORF	REV__ENST00000252136.11_2_22:20104550-20104601:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8416137695312	2	546.841074	1091.66759	0.96702	0.0005288	-2.8806	-0.0015752	-1.9136	-0.0010464	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.86452	1	12272	12272		30.504	5.0535	1	9124000	+		25374	24290	17097	17107	29000	29000					0.12542757685173456
LAPAVQERRLL	11	Unmodified	_LAPAVQERRLL_					0	0	0		chr16:89866-92596|29|16.34|0.48|5.08|-|0|None,NPRL3|1	chr16:89866-92596|29|16.34|0.48|5.08|-|0|None,NPRL3|1	chr16:89866-92596|29|16.34|0.48|5.08|-|0|None,NPRL3|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5915832519531	3	422.594461	1264.76155	-0.80517	-0.00034026	-3.0497	-0.0012888	-3.8549	-0.001629	422.59310710706274	46.905	2.5172	47.828	47.069	49.587	0.92315					149	61	4	0	0	0	0.80813	1	4420	4420		9.6461	0.46323	1	3696000			25375	210	17098	17108	29001	29001					0.13976431996798055
LAPDDRSY	8	Unmodified	_LAPDDRSY_					0	0	0		ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232666015625	2	468.724707	935.43486	-0.58063	-0.00027215	-3.1666	-0.0014842	-3.7472	-0.0017564	468.72346030200146	77.011	2.0488	77.579	77.289	79.337	0.56836					141	50	5	0	0	0	0.89494	1	8770	8770		37.159	2.0071	1	13648000			25376	7667	17099	17109	29002	29002					-0.03543968895951366
LAPDLAPDVIL	11	Unmodified	_LAPDLAPDVIL_					0	0	0			REV__ENSG00000099381|ENST00000262519|SETD1A	REV__ENSG00000099381|ENST00000262519|SETD1A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.85302734375	2	568.831714	1135.64888	1.519	0.00086403	-3.2819	-0.0018669	-1.763	-0.0010028	568.8292637733362	102.3	0.90536	102.34	101.93	102.83	0.043198					45	21	3	0	0	0	0.15921	1	11030	11030		39.253	0	1	230490	+		25377	17094	17100	17110	29003	29003					0.08647738480090084
LAPDLAPDVIL	11	Unmodified	_LAPDLAPDVIL_					0	0	0			REV__ENSG00000099381|ENST00000262519|SETD1A	REV__ENSG00000099381|ENST00000262519|SETD1A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8531494140625	2	568.831714	1135.64888	0.52081	0.00029625	1.1921	0.00067813	1.713	0.00097438	568.8333282227146	102.05	0.54834	102.25	101.97	102.52	0.19483					30	13	3	0	0	0	0.15921	1	10704	10704		47.657	0	1	584090	+		25378	17094	17100	17110	29004	29004					0.08647738480090084
LAPELLKLVGG	11	Unmodified	_LAPELLKLVGG_					0	0	0			REV__nc|ENSG00000136877|Q05932-3|FPGS	REV__nc|ENSG00000136877|Q05932-3|FPGS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.3539428710938	2	555.350074	1108.6856	2.1967	0.00122	4.1632	0.0023121	6.36	0.003532	555.3522704950425	100.68	0.92799	101.03	100.57	101.5	0.3459					69	22	4	0	0	0	0.69995	1	12265	12265		31.53	3.6476	1	1353700	+		25379	19344	17101	17111	29005	29005					0.13560035096656975
LAPFAKGAR	9	Unmodified	_LAPFAKGAR_					0	0	0			REV__ENST00000547521.5_1_12:44152776-44152941:+|nuORF	REV__ENST00000547521.5_1_12:44152776-44152941:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77740478515625	2	465.779619	929.544686	-1.5315	-0.00071332	-2.8632	-0.0013336	-4.3947	-0.0020469	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.78058	1	7729	7729		30.504	0.6621	1	991370	+		25380	28552	17102	17112	29006	29006					0.07709501233898663
LAPFAKGAR	9	Unmodified	_LAPFAKGAR_					0	0	0			REV__ENST00000547521.5_1_12:44152776-44152941:+|nuORF	REV__ENST00000547521.5_1_12:44152776-44152941:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.77740478515625	2	465.779619	929.544686	-0.69238	-0.0003225	-3.5487	-0.0016529	-4.2411	-0.0019754	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.7932	1	9380	9380		24.203	3.7209	1	927810	+		25381	28552	17102	17112	29007	29007					0.07709501233898663
LAPIAASTV	9	Unmodified	_LAPIAASTV_					0	0	0			REV__ENSG00000131788|ENST00000393045|PIAS3	REV__ENSG00000131788|ENST00000393045|PIAS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.75146484375	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.77546	2	7591	7591;7678		31.955	1.4512	1	579450	+		25382	18967	17103	17113	29008;29009	29008					0.06383284011519663
LAPIKRIVSL	10	Unmodified	_LAPIKRIVSL_					0	0	0			REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.3535766601562	2	555.373884	1108.73321	3.1398	0.0017437	-3.0846	-0.0017131	0.055148	3.0628E-05	555.373198800822	100.99	0.20137	100.94	100.84	101.04	-0.052116					5	4	2	0	0	0	0.37624	1	10979	10979		9.7057	0	1	43437	+		25383	17980	17104	17114	29010	29010					0.18319734087504003
LAPITPTLWRA	11	Unmodified	_LAPITPTLWRA_					0	0	0			REV__ENST00000574955.1_1_17:1413761-1417263:-|nuORF	REV__ENST00000574955.1_1_17:1413761-1417263:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8680419921875	2	619.866423	1237.71829	0.5439	0.00033715	4.1993	0.002603	4.7432	0.0029401	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.7144	1	11226	11226		29.17	2.1227	1	1280900	+		25384	28980	17105	17115	29011	29011					0.10894242219501393
LAPKESKHGG	10	Unmodified	_LAPKESKHGG_					0	0	0			REV__nc|ENSG00000097007|P00519-2|ABL1	REV__nc|ENSG00000097007|P00519-2|ABL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2817993164062	2	512.282723	1022.55089	-0.052062	-2.6671E-05	-2.6058	-0.0013349	-2.6579	-0.0013616	512.2812910993212	86.454	3.487	86.521	85.51	88.997	0.067436					149	81	2	0	0	0	0.82886	1	8737	8737		37.812	3.639	1	329990	+		25385	29733	17106	17116	29012	29012					0.04051974674769099
LAPKIVDTLH	10	Unmodified	_LAPKIVDTLH_					0	0	0		ENST00000507414.1_1_5:7892894-7893736:+|nuORF	ENST00000507414.1_1_5:7892894-7893736:+|nuORF	ENST00000507414.1_1_5:7892894-7893736:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8312377929688	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.85466	1	9382	9382		20.947	0.95016	1	5219600			25386	12955	17107	17117	29013	29013					0.10094577919812764
LAPKIVDTLH	10	Unmodified	_LAPKIVDTLH_					0	0	0		ENST00000507414.1_1_5:7892894-7893736:+|nuORF	ENST00000507414.1_1_5:7892894-7893736:+|nuORF	ENST00000507414.1_1_5:7892894-7893736:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8296508789062	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.86763	1	8789	8789		26.693	3.6504	1	1728300			25387	12955	17107	17117	29014	29014					0.10094577919812764
LAPLALYS	8	Unmodified	_LAPLALYS_					0	0	0			REV__ENSG00000142798|ENST00000374695|HSPG2	REV__ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	424.2505187988281	2	424.249829	846.485105	-0.96204	-0.00040814	1.4699	0.00062359	0.50782	0.00021544	424.25046651193156	107.31	0.79755	107.31	106.93	107.73	0					66	18	4	0	0	0	0.87276	2	11156	11156;11180		29.842	6.8048	1	4999300	+		25388	19756	17108	17118	29015;29016	29015					0.05572185499852367
LAPLALYS	8	Unmodified	_LAPLALYS_					0	0	0			REV__ENSG00000142798|ENST00000374695|HSPG2	REV__ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.2500915527344	2	424.249829	846.485105	-0.18354	-7.7867E-05	0.52567	0.00022301	0.34213	0.00014515	424.2501209493524	107.39	0.88235	107.36	106.9	107.79	-0.034401					76	20	5	0	0	0	0.87276	2	11669	11669;11706		29.842	3.0454	1	4879200	+		25389	19756	17108	17118	29017;29018	29017					0.05572185499852367
LAPLALYS	8	Unmodified	_LAPLALYS_					0	0	0			REV__ENSG00000142798|ENST00000374695|HSPG2	REV__ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.2499084472656	2	424.249829	846.485105	2.718	0.0011531	-2.2377	-0.00094934	0.48033	0.00020378	424.24890535908264	107.33	0.96184	107.3	106.88	107.84	-0.034134					71	22	4	0	0	0	0.90024	1	11882	11882		39.021	1.993	1	4480000	+		25390	19756	17108	17118	29019	29019					0.05572185499852367
LAPLALYS	8	Unmodified	_LAPLALYS_					0	0	0			REV__ENSG00000142798|ENST00000374695|HSPG2	REV__ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.2503356933594	2	424.249829	846.485105	2.8565	0.0012119	-2.4364	-0.0010336	0.42017	0.00017826	424.2488058967198	107.13	1.0598	107.16	106.76	107.82	0.035614					82	24	5	0	0	0	0.87276	1	11753	11753		29.842	4.3914	1	4411900	+		25391	19756	17108	17118	29020	29020					0.05572185499852367
LAPLALYS	8	Unmodified	_LAPLALYS_					0	0	0			REV__ENSG00000142798|ENST00000374695|HSPG2	REV__ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.2501220703125	2	424.249829	846.485105	-1.706	-0.00072376	2.169	0.0009202	0.46303	0.00019644	424.25084756935905	107.01	1.1995	107.14	106.73	107.93	0.13867					96	29	5	0	0	0	0.87276	4	11461	11461;11485;11509;11524		39.021	7.1869	1	11083000	+		25392	19756	17108	17118	29021;29022;29023;29024	29021					0.05572185499852367
LAPLALYS	8	Unmodified	_LAPLALYS_					0	0	0			REV__ENSG00000142798|ENST00000374695|HSPG2	REV__ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	424.2500915527344	2	424.249829	846.485105	0.73419	0.00031148	-0.3455	-0.00014658	0.38869	0.0001649	424.2497618988356	107.12	1.1041	107.22	106.78	107.88	0.091255					91	26	5	0	0	0	0.89457	2	11471	11471;11494		37.028	3.5129	1	9522100	+		25393	19756	17108	17118	29025;29026	29025					0.05572185499852367
LAPLGHKKHKH	11	Unmodified	_LAPLGHKKHKH_					0	0	0		ENSG00000140807|ENST00000268459|NKD1	ENSG00000140807|ENST00000268459|NKD1	ENSG00000140807|ENST00000268459|NKD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.9286804199219	3	422.591163	1264.75166	1.8674	0.00078915	2.7289	0.0011532	4.5963	0.0019424	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.78391	1	4899	4899		14.694	0.60766	1	997830			25394	4457	17109	17119	29027	29027					0.12987288782073847
LAPLLAVHKD	10	Unmodified	_LAPLLAVHKD_					0	0	0		ENSG00000109956|ENST00000312527|B3GAT1;nc|ENSG00000109956|Q9P2W7-2|B3GAT1	ENSG00000109956|ENST00000312527|B3GAT1	ENSG00000109956|ENST00000312527|B3GAT1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3276977539062	2	538.826766	1075.63898	3.5706	0.001924	-0.24863	-0.00013397	3.322	0.00179	538.8268480727437	116.08	0.90312	116.06	115.87	116.77	-0.02433					34	25	2	0	0	0	0.37624	1	12846	12846		44.117	19.598	1	75239			25395	2496	17110	17120	29028	29028					0.1041859526535518
LAPLSPLGG	9	Unmodified	_LAPLSPLGG_					0	0	0		ENST00000522678.5_1_2:219125772-219125886:+|nuORF	ENST00000522678.5_1_2:219125772-219125886:+|nuORF	ENST00000522678.5_1_2:219125772-219125886:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.746337890625	2	412.747453	823.480354	-1.81	-0.00074707	-1.0377	-0.00042831	-2.8477	-0.0011754	412.74693613939564	84.91	2.7925	85.06	84.234	87.026	0.14951					114	64	4	0	0	0	0.76996	1	8244	8244		33.516	0	1	976210			25396	13190	17111	17121	29029	29029					0.06155301357091503
LAPLVGQLVR	10	Unmodified	_LAPLVGQLVR_					0	0	0			REV__ENSG00000267631|ENST00000301407|CGB1	REV__ENSG00000267631|ENST00000301407|CGB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.3402099609375	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.86718	1	10048	10048		27.882	7.8855	1	1199500	+		25397	17475	17112	17122	29030	29030					0.1408658801931324
LAPLVGQLVR	10	Unmodified	_LAPLVGQLVR_					0	0	0			REV__ENSG00000267631|ENST00000301407|CGB1	REV__ENSG00000267631|ENST00000301407|CGB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3403930664062	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.86718	1	10599	10599		27.882	8.5223	1	2530900	+		25398	17475	17112	17122	29031	29031					0.1408658801931324
LAPMNLVAL	9	Unmodified	_LAPMNLVAL_					0	0	0			REV__ENSG00000122477|ENST00000370137|LRRC39	REV__ENSG00000122477|ENST00000370137|LRRC39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.279052734375	2	471.278063	940.541574	0.52857	0.0002491	2.5455	0.0011996	3.0741	0.0014487	471.27940797558165	23.959	0.47219	23.577	23.365	23.837	-0.38178					21	10	3	0	0	0	0.67235	1	1117	1117		42.474	3.2216	1	78684	+		25399	18497	17113	17123	29032	29032					0.0689249006487671
LAPMNLVAL	9	Unmodified	_LAPMNLVAL_					0	0	0			REV__ENSG00000122477|ENST00000370137|LRRC39	REV__ENSG00000122477|ENST00000370137|LRRC39	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	471.278063	940.541574	0.52857	0.0002491	2.5455	0.0011996	3.0741	0.0014487	471.27940797558165	23.959	0.47219	23.577	23.365	23.837	-0.38178	0.12551	-0.00045361	NaN	42.474	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78684	+		25400	18497	17113	17123							0.0689249006487671
LAPMNLVAL	9	Unmodified	_LAPMNLVAL_					0	0	0			REV__ENSG00000122477|ENST00000370137|LRRC39	REV__ENSG00000122477|ENST00000370137|LRRC39	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	471.278063	940.541574	0.6923	0.00032626	3.3675	0.001587	4.0597	0.0019133	471.2794036634529	23.9	0.41882	23.326	23.136	23.555	-0.57415	-0.12551	0.00032113	NaN	42.474	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102560	+		25401	18497	17113	17123							0.0689249006487671
LAPPVFRGGL	10	Unmodified	_LAPPVFRGGL_					0	0	0			REV__ENST00000512891.1_1_5:177593469-177593508:+|nuORF	REV__ENST00000512891.1_1_5:177593469-177593508:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8084106445312	2	513.808377	1025.6022	0.14837	7.6233E-05	1.0682	0.00054883	1.2165	0.00062507	513.8088134492856	48.067	1.4161	48.057	47.714	49.13	-0.0093269					122	36	4	0	0	0	0.86305	1	4033	4033		31.955	1.4512	1	1557500	+		25402	20907	17114	17124	29033	29033					0.09042343439477918
LAPREKIREGL	11	Unmodified	_LAPREKIREGL_					0	0	0			REV__nc|ENSG00000037749|P55082-2|MFAP3	REV__nc|ENSG00000037749|P55082-2|MFAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.3846435546875	2	641.385511	1280.75647	1.6527	0.00106	-3.143	-0.0020159	-1.4904	-0.00095591	641.383219573957	102.66	1.2178	102.7	102.3	103.51	0.043198					82	29	4	0	0	0	0.61824	1	11080	11080		42.338	18.815	1	1834000	+		25403	16298	17115	17125	29034	29034					0.12732128134166487
LAPRIYLPP	9	Unmodified	_LAPRIYLPP_					0	0	0		ENST00000471018.6_1_1:2065362-2066779:+|nuORF	ENST00000471018.6_1_1:2065362-2066779:+|nuORF	ENST00000471018.6_1_1:2065362-2066779:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.2742919921875	2	520.318577	1038.6226	-1.4278	-0.00074292	-1.0899	-0.00056709	-2.5177	-0.00131	520.3179747723991	43.841	0.61247	44.614	44.303	44.915	0.7738					31	14	3	0	0	0	0.20789	1	4019	4019		18.324	11.589	1	236420			25404	12231	17116	17126	29035	29035					0.1048351409924635
LAPRLCFLHF	10	Unmodified	_LAPRLCFLHF_					0	0	0			REV__nc|ENSG00000009954|Q9UIG0-2|BAZ1B	REV__nc|ENSG00000009954|Q9UIG0-2|BAZ1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.8360595703125	2	608.836611	1215.65867	0.09385	5.714E-05	0.54626	0.00033258	0.64011	0.00038972	608.836828431824	110.46	1.0631	110.5	110.23	111.29	0.031738					103	33	4	0	0	0	0.86718	1	12184	12184		27.882	4.3595	1	3714300	+		25405	16154	17117	17127	29036	29036					0.05946648004464805
LAPRLLKDS	9	Unmodified	_LAPRLLKDS_					0	0	0		ENSG00000114735|ENST00000232854|HEMK1;ENST00000448997.5_1_3:50608680-50617422:+|nuORF;ENST00000482974.1_1_3:50614485-50617422:+|nuORF	ENSG00000114735|ENST00000232854|HEMK1	ENSG00000114735|ENST00000232854|HEMK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.2921447753906	2	506.811116	1011.60768	0.38219	0.0001937	0.51487	0.00026094	0.89706	0.00045464	506.81100997721177	53.486	0.37089	53.562	53.276	53.647	0.075726					11	9	2	0	0	0	0.20789	1	4350	4350		15.642	0.77694	1	56713			25406	2786	17118	17128	29037	29037					0.1023402223128187
LAPRLPSAPP	10	Unmodified	_LAPRLPSAPP_					0	0	0		ENST00000373313.2_1_20:39317299-39317872:-|nuORF	ENST00000373313.2_1_20:39317299-39317872:-|nuORF	ENST00000373313.2_1_20:39317299-39317872:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8036193847656	2	509.805834	1017.59712	-0.38176	-0.00019462	-3.8277	-0.0019514	-4.2095	-0.002146	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.8608	1	8231	8231		34.173	2.2177	1	948010			25407	10739	17119	17129	29038	29038					0.08902039576832976
LAPRPPKAGGR	11	Unmodified	_LAPRPPKAGGR_					0	0	0			REV__ENSG00000179776|ENST00000341529|CDH5	REV__ENSG00000179776|ENST00000341529|CDH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3425903320312	2	560.340907	1118.66726	1.3844	0.00077572	-2.1968	-0.0012309	-0.81239	-0.00045522	560.3396080868185	114.62	2.2118	114.64	113.84	116.05	0.026466					86	62	2	0	0	0	0.7342	1	12641	12641		25.574	3.6142	1	96310	+		25408	22354	17120	17130	29039	29039					0.11267337965318802
LAPRPPKAGGR	11	Unmodified	_LAPRPPKAGGR_					0	0	0			REV__ENSG00000179776|ENST00000341529|CDH5	REV__ENSG00000179776|ENST00000341529|CDH5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	560.340907	1118.66726	2.6687	0.0014954	-3.7054	-0.0020763	-1.0367	-0.00058089	560.3386009928607	114.4	0.51182	114.41	114.25	114.76	0.0094528	-0.094771	-0.0014825	NaN	25.574	36	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42966	+		25409	22354	17120	17130							0.11267337965318802
LAPRPRRR	8	Unmodified	_LAPRPRRR_					0	0	0		nc|ENSG00000154914|Q70EL4-4|USP43;ENSG00000154914|ENST00000285199|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.32763671875	2	511.328134	1020.64171	0.7825	0.00040011	-2.7639	-0.0014132	-1.9814	-0.0010131	511.32659948169965	97.129	2.2022	97.292	96.878	99.081	0.16316					131	50	4	0	0	0	0.80706	1	10018	10018		19.36	0	1	1350400			25410	5304	17121	17131	29040	29040					0.13221908233549584
LAPSECPPQ	9	Unmodified	_LAPSECPPQ_					0	0	0			REV__ENSG00000136237|ENST00000665637|RAPGEF5	REV__ENSG00000136237|ENST00000665637|RAPGEF5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2560119628906	2	471.223485	940.432418	-0.34706	-0.00016354	3.8032	0.0017922	3.4562	0.0016286	471.22468970052057	29.918	0.42849	29.828	29.663	30.092	-0.089546					14	9	3	0	0	0	0.20789	1	1957	1957		34.173	23.307	1	70403	+		25411	19296	17122	17132	29041	29041					-0.04018140625260003
LAPSQAETTGA	11	Unmodified	_LAPSQAETTGA_					0	0	0			REV__ENST00000367463.4_1_6:149397103-149397247:+|nuORF	REV__ENST00000367463.4_1_6:149397103-149397247:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.7604370117188	2	523.261653	1044.50875	0.5992	0.00031354	-3.2901	-0.0017216	-2.6909	-0.001408	523.7604804784513	60.52	0.95633	60.487	59.981	60.938	-0.032513					74	26	4	0	0	0	0.69248	1	5687	5687		32.751	4.669	1	391710	+		25412	25563	17123	17133	29042	29042					-0.011720455242993921
LAPSQAETTGA	11	Unmodified	_LAPSQAETTGA_					0	0	0			REV__ENST00000367463.4_1_6:149397103-149397247:+|nuORF	REV__ENST00000367463.4_1_6:149397103-149397247:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7937622070312	2	523.261653	1044.50875	1.2487	0.00065337	-3.082	-0.0016127	-1.8333	-0.00095931	523.2604066243365	20.904	1.3784	20.445	20.145	21.524	-0.4591					30	32	2	0	0	0	0.15142	1	819	819		29.551	0	1	61925	+		25413	25563	17123	17133	29043	29043					-0.011720455242993921
LAPVVWVF	8	Unmodified	_LAPVVWVF_					0	0	0			REV__ENSG00000162402|ENST00000294383|USP24	REV__ENSG00000162402|ENST00000294383|USP24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7777099609375	2	465.776014	929.537475	-0.1189	-5.538E-05	3.6166	0.0016845	3.4977	0.0016291	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.84567	1	7777	7777		24.504	2.5441	1	345200	+		25414	20809	17124	17134	29044	29044					0.06988768633470954
LAQAIFHKV	9	Unmodified	_LAQAIFHKV_					0	0	0		ENSG00000178965|ENST00000326665|ERICH3	ENSG00000178965|ENST00000326665|ERICH3	ENSG00000178965|ENST00000326665|ERICH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8087768554688	2	513.808377	1025.6022	-0.22351	-0.00011484	1.6547	0.00085019	1.4312	0.00073535	513.8091977878661	50.938	0.75373	50.946	50.757	51.511	0.0077438					49	23	3	0	0	0	0.78536	1	4423	4423		29.15	0.89528	1	174420			25415	7235	17125	17135	29045	29045					0.0904234343945518
LAQDILSKLPR	11	Unmodified	_LAQDILSKLPR_					0	0	0		ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3825073242188	2	627.382437	1252.75032	1.3883	0.00087098	-1.7808	-0.0011173	-0.39257	-0.00024629	627.3811393436591	112.19	0.42046	112.3	112.06	112.48	0.10638					48	15	4	0	0	0	0.7342	1	12074	12074		25.574	4.6271	1	25719000			25416	5483	17126	17136	29046	29046					0.1340560990265658
LAQGRVGH	8	Unmodified	_LAQGRVGH_					0	0	0			REV__nc|ENSG00000188175|A8MVW5-2|HEPACAM2	REV__nc|ENSG00000188175|A8MVW5-2|HEPACAM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1839904785156	2	419.238119	836.461684	1.6807	0.0007046	1.3747	0.00057632	3.0554	0.0012809	419.2384245059838	91.771	0.89361	92.221	91.756	92.649	0.44958					33	20	2	0	0	0	0.4196	1	10913	10913		52.299	21.796	1	205060	+		25417	22985	17127	17137	29047	29047					0.03691184505896672
LAQKLAKKTHQ	11	Unmodified	_LAQKLAKKTHQ_					0	0	0			REV__ENSG00000141431|ENST00000269197|ASXL3	REV__ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5926818847656	3	422.594461	1264.76155	-0.026175	-1.1061E-05	-4.2947	-0.0018149	-4.3209	-0.001826	422.59256755528145	49.138	2.4235	49.133	48.474	50.898	-0.0056419					208	62	5	0	0	0	0.76384	1	4171	4171		18.966	0	1	1959300	+		25418	19683	17128	17138	29048	29048					0.13976431996798055
LAQKLAKKTHQ	11	Unmodified	_LAQKLAKKTHQ_					0	0	0			REV__ENSG00000141431|ENST00000269197|ASXL3	REV__ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.9273681640625	3	422.594461	1264.76155	-0.015219	-6.4315E-06	-4.1372	-0.0017484	-4.1524	-0.0017548	422.5925783921211	58.971	2.9474	58.94	58.062	61.01	-0.030884					151	84	3	0	0	0	0.73277	1	5487	5487		25.892	3.3121	1	166800	+		25419	19683	17128	17138	29049	29049					0.13976431996798055
LAQKLAKKTHQ	11	Unmodified	_LAQKLAKKTHQ_					0	0	0			REV__ENSG00000141431|ENST00000269197|ASXL3	REV__ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.592041015625	3	422.594461	1264.76155	-1.8059	-0.00076316	-2.4921	-0.0010531	-4.298	-0.0018163	422.5932330431751	57.933	1.2573	58.013	57.628	58.885	0.079643					127	59	3	0	0	0	0.76087	1	4898	4898		19.627	0.36425	1	268900	+		25420	19683	17128	17138	29050	29050					0.13976431996798055
LAQKLAKKTHQ	11	Unmodified	_LAQKLAKKTHQ_					0	0	0			REV__ENSG00000141431|ENST00000269197|ASXL3	REV__ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5927429199219	3	422.594461	1264.76155	0.31839	0.00013455	-3.8415	-0.0016234	-3.5231	-0.0014888	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.68431	2	4551	4530;4551		34.087	10.564	1	1249100	+		25421	19683	17128	17138	29051;29052	29052					0.13976431996798055
LAQLFIKH	8	Unmodified	_LAQLFIKH_					0	0	0		nc|ENSG00000240771|Q86VW2-2|ARHGEF25;ENSG00000240771|ENST00000286494|ARHGEF25;nc|ENSG00000240771|Q86VW2-3|ARHGEF25;ENST00000459915.2_1_3:124356033-124393462:+|nuORF;nc|ENSG00000160145|O60229-5|KALRN;ENST00000393496.5_1_3:124223749-124393462:+|nuORF;nc|ENSG00000160145|O60229-6|KALRN;nc|ENSG00000160145|O60229-4|KALRN;ENSG00000160145|ENST00000682506|KALRN;nc|ENSG00000160145|O60229|KALRN;ENST00000471370.5_1_12:58007928-58008279:+|nuORF	nc|ENSG00000240771|Q86VW2-2|ARHGEF25;ENSG00000160145|ENST00000682506|KALRN;ENST00000471370.5_1_12:58007928-58008279:+|nuORF	ENSG00000160145|ENST00000682506|KALRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	485.295654296875	2	485.297645	968.580737	-1.6628	-0.00080696	-2.8355	-0.0013761	-4.4984	-0.002183	485.2962302865475	102.17	1.1411	102.31	101.84	102.98	0.13569					40	27	2	0	0	0	0.85277	1	10709	10709		25.45	1.2474	1	544800			25422	5556;8785;12239	17129	17139	29053	29053					0.09518958410751566
LAQLPEEL	8	Unmodified	_LAQLPEEL_					0	0	0		ENSG00000178772|ENST00000323830|CPN2	ENSG00000178772|ENST00000323830|CPN2	ENSG00000178772|ENST00000323830|CPN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7554626464844	2	456.755475	911.496398	-1.6814	-0.00076797	2.6309	0.0012017	0.94951	0.00043369	456.75620952490556	72.619	1.1177	73.005	72.417	73.535	0.38582					61	26	4	0	0	0	0.91977	1	8107	8107		45.952	1.4209	1	566860			25423	7222	17130	17140	29054	29054					0.03710962803347684
LAQPVRRSLPA	11	Unmodified	_LAQPVRRSLPA_					0	0	0		ENSG00000109171|ENST00000264313|SLAIN2	ENSG00000109171|ENST00000264313|SLAIN2	ENSG00000109171|ENST00000264313|SLAIN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3677368164062	2	604.367121	1206.71969	-0.13005	-7.8595E-05	0.13866	8.3799E-05	0.0086108	5.2041E-06	604.3670329233015	112.82	1.3791	112.85	112.73	114.11	0.028854					63	36	2	0	0	0	0.81035	1	12395	12395		9.1829	2.4474	1	1097300			25424	2452	17131	17141	29055	29055					0.12459876308275852
LAQQVRAVAQ	10	Unmodified	_LAQQVRAVAQ_					0	0	0		ENSG00000182810|ENST00000332395|DDX28	ENSG00000182810|ENST00000332395|DDX28	ENSG00000182810|ENST00000332395|DDX28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.3212890625	2	542.317097	1082.61964	2.1481	0.0011649	1.1635	0.00063097	3.3116	0.0017959	542.3176764872975	26.019	1.1415	25.588	25.272	26.413	-0.4311					66	25	4	0	0	0	0.5766	1	1444	1444		51.335	0	1	2664100			25425	7474	17132	17142	29056	29056					0.08163638974451715
LAQRAFIL	8	Unmodified	_LAQRAFIL_					0	0	0		nc|ENSG00000099991|Q9Y6J0-2|CABIN1;ENSG00000099991|ENST00000263119|CABIN1	nc|ENSG00000099991|Q9Y6J0-2|CABIN1	nc|ENSG00000099991|Q9Y6J0-2|CABIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.2898864746094	2	466.28982	930.565087	-1.2303	-0.0005737	1.203	0.00056094	-0.027368	-1.2762E-05	466.29024869048817	74.015	1.0053	74.101	73.822	74.827	0.085907					87	43	3	0	0	0	0.9159	1	6831	6831		44.531	2.0566	1	935090			25426	1781	17133	17143	29057	29057					0.09702671893705883
LAQVFAETF	9	Unmodified	_LAQVFAETF_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.2716674804688	2	513.26875	1024.52295	-0.34568	-0.00017743	-0.34671	-0.00017795	-0.69238	-0.00035538	513.2681850311778	76.031	0.90755	76.156	75.674	76.581	0.12485					50	27	3	0	0	0	0.64922	1	7116	7116		44.117	1.6423	1	111040	+		25427	23358	17134	17144	29058	29058					0.011666516946434058
LARAGKRT	8	Unmodified	_LARAGKRT_					0	0	0			REV__ENSG00000177383|ENST00000317897|MAGEF1	REV__ENSG00000177383|ENST00000317897|MAGEF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.7724304199219	2	436.774868	871.535184	-1.6287	-0.0007114	-0.89477	-0.00039082	-2.5235	-0.0011022	436.7743504876495	26.927	0.91903	26.994	26.723	27.642	0.066877					84	43	3	0	0	0	0.81184	1	1065	1065		19.997	0	1	198510	+		25428	22199	17135	17145	29059	29059					0.0942773294835888
LARARRTAM	9	Unmodified	_LARARRTAM_					0	0	0		ENSG00000185614|ENST00000333323|INKA1;nc|ENSG00000185614|Q96EL1|INKA1	ENSG00000185614|ENST00000333323|INKA1	ENSG00000185614|ENST00000333323|INKA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.30322265625	2	523.30601	1044.59747	-0.83281	-0.00043582	-3.8682	-0.0020243	-4.701	-0.0024601	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.76255	2	8157	8090;8157		35.618	5.9224	1	2778600			25429	7728	17136	17146	29060;29061	29061					0.07695136025040483
LARASLCLSR	10	Unmodified	_LARASLCLSR_					0	0	0			REV__ENST00000334801.7_1_11:118780860-118781538:-|nuORF	REV__ENST00000334801.7_1_11:118780860-118781538:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3171997070312	2	545.3135	1088.61245	3.5513	0.0019366	2.6901	0.001467	6.2414	0.0034035	545.3148041335187	102.59	0.81557	102.54	102.1	102.91	-0.047005					57	19	4	0	0	0	0.86587	1	11219	11219		29.17	2.4771	1	893830	+		25430	25162	17137	17147	29062	29062					0.07168583102384218
LARGVLTGP	9	Unmodified	_LARGVLTGP_					0	0	0		ENST00000568503.1_1_16:67208072-67208471:+|nuORF;nc|ENSG00000140939|O60936|NOL3;ENSG00000140939|ENST00000568146|NOL3;nc|ENSG00000140939|O60936-3|NOL3	ENST00000568503.1_1_16:67208072-67208471:+|nuORF	ENST00000568503.1_1_16:67208072-67208471:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.270751953125	2	442.271627	882.528701	0.072632	3.2123E-05	-0.92756	-0.00041023	-0.85493	-0.00037811	442.2710823318827	84.471	2.4316	84.918	83.971	86.403	0.44736					123	59	3	0	0	0	0.55097	1	9920	9920		49.442	1.5259	1	2524500			25431	4466	17138	17148	29063	29063					0.08273794996989636
LARGWSDH	8	Unmodified	_LARGWSDH_					0	0	0		ENST00000397887.7_1_21:46270219-46270474:-|nuORF	ENST00000397887.7_1_21:46270219-46270474:-|nuORF	ENST00000397887.7_1_21:46270219-46270474:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2341613769531	2	471.233033	940.451513	-0.88883	-0.00041884	3.945	0.001859	3.0562	0.0014402	471.2346931184247	73.215	1.0351	73.603	73.043	74.078	0.38779					53	27	3	0	0	0	0.9295	1	8226	8226		55.504	0.73953	1	1012600			25432	11165	17139	17149	29064	29064					-0.021094232193377138
LARIFQLLLSH	11	Unmodified	_LARIFQLLLSH_					0	0	0		ENSG00000198691|ENST00000370225|ABCA4	ENSG00000198691|ENST00000370225|ABCA4	ENSG00000198691|ENST00000370225|ABCA4	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.60296630859375	3	437.602957	1309.78704	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.305	1	55.305	54.805	55.805	0								0	0	0	0.56276	1	4688	4688		28.577	4.3449	1				25433	8308	17140	17150	29065	29065					0.14453906519224802
LARIRLPLAM	10	Unmodified	_LARIRLPLAM_					0	0	0		ENST00000577720.1_1_18:22807484-22811470:-|nuORF	ENST00000577720.1_1_18:22807484-22811470:-|nuORF	ENST00000577720.1_1_18:22807484-22811470:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3662109375	2	577.365536	1152.71652	-0.31737	-0.00018324	2.1739	0.0012551	1.8565	0.0010719	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.85939	1	10498	10498		23.042	0.46283	1	6617600			25434	14071	17141	17151	29066	29066					0.14626909929893372
LARKQRAR	8	Unmodified	_LARKQRAR_					0	0	0			REV__nc|ENSG00000177125|Q8NCN2|ZBTB34	REV__nc|ENSG00000177125|Q8NCN2|ZBTB34	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.2723693847656	2	499.820141	997.62573	-0.053861	-2.6921E-05	-2.6541	-0.0013266	-2.7079	-0.0013535	500.31955173475836	24.283	0.53154	23.902	23.576	24.108	-0.38178					12	11	2	0	0	0	0.4196	1	1160	1160		7.6903	0	1	34618	+		25435	22182	17142	17152	29067	29067					0.1268220199665393
LARLKIRAL	9	Unmodified	_LARLKIRAL_					0	0	0		ENSG00000163013|ENST00000520530|FBXO41	ENSG00000163013|ENST00000520530|FBXO41	ENSG00000163013|ENST00000520530|FBXO41	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.36572265625	2	527.366393	1052.71823	1.2345	0.00065103	-3.6951	-0.0019487	-2.4606	-0.0012977	527.364319167524	19.985	0.83215	19.515	19.303	20.135	-0.46967					22	17	2	0	0	0	0.78058	1	592	592		30.504	0	1	57950			25436	5757	17143	17153	29068	29068					0.1939828701015358
LARLKLAI	8	Unmodified	_LARLKLAI_					0	0	0		nc|ENSG00000133107|Q9UBN4-4|TRPC4;nc|ENSG00000133107|Q9UBN4-3|TRPC4;nc|ENSG00000133107|Q9UBN4-2|TRPC4;ENSG00000133107|ENST00000379705|TRPC4;nc|ENSG00000133107|Q9UBN4-5|TRPC4;nc|ENSG00000133107|Q9UBN4-7|TRPC4	nc|ENSG00000133107|Q9UBN4-4|TRPC4	nc|ENSG00000133107|Q9UBN4-4|TRPC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.31439208984375	2	449.315838	896.617122	0.060144	2.7024E-05	-2.6688	-0.0011991	-2.6086	-0.0011721	449.3144620861982	21.476	1.5551	21.033	20.161	21.716	-0.44324					87	36	3	0	0	0	0.86791	1	763	763		28.254	0	1	594410			25437	3856	17144	17154	29069	29069					0.1646783530744642
LARLLQFTT	9	Unmodified	_LARLLQFTT_					0	0	0		ENST00000557688.1_1_14:75130600-75131628:-|nuORF;nc|ENSG00000119682|O15033-2|AREL1;ENST00000557401.5_1_14:75130603-75152321:-|nuORF;ENSG00000119682|ENST00000356357|AREL1	ENST00000557688.1_1_14:75130600-75131628:-|nuORF	ENST00000557688.1_1_14:75130600-75131628:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8167724609375	2	531.818941	1061.62333	-1.264	-0.00067223	-2.5284	-0.0013447	-3.7925	-0.0020169	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.7932	1	10488	10488		21.96	1.013	1	4586300			25438	3086	17145	17155	29070	29070					0.09498308748334239
LARLWKNV	8	Unmodified	_LARLWKNV_					0	0	0		nc|ENSG00000168016|O15050|TRANK1;ENSG00000168016|ENST00000645898|TRANK1	nc|ENSG00000168016|O15050|TRANK1	nc|ENSG00000168016|O15050|TRANK1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.3049621582031	2	500.308544	998.602535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.016	1	95.016	94.516	95.516	0								0	0	0	0.30045	1	9436	9436		40.573	1.7665	1				25439	6357	17146	17156	29071	29071					0.10317763159309834
LARMLGIV	8	Unmodified	_LARMLGIV_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7735900878906	2	436.772948	871.531344	0.068775	3.0039E-05	1.8603	0.00081255	1.9291	0.00084258	436.77361932227035	26.594	0.6912	26.703	26.441	27.132	0.10901					65	32	3	0	0	0	0.82464	1	1023	1023		21.702	1.2205	1	226120	+		25440	20437;29946	17147	17157	29072	29072					0.09043927130301199
LARMVASRI	9	Unmodified	_LARMVASRI_					0	0	0		nc|ENSG00000046651|O75665-3|OFD1;ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13771424-13787224:+|nuORF	nc|ENSG00000046651|O75665-3|OFD1	nc|ENSG00000046651|O75665-3|OFD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8077392578125	2	508.805311	1015.59607	0.80209	0.00040811	4.425	0.0022515	5.2271	0.0026596	508.8074220934711	82.728	1.203	83.202	82.795	83.998	0.47383					78	28	4	0	0	0	0.74721	2	9592	9592;9604		37.159	1.1189	1	3379300			25441	952	17148	17158	29073;29074	29073					0.08889501936289435
LARPAESSE	9	Unmodified	_LARPAESSE_					0	0	0		ENST00000594954.5_1_19:35820289-35820811:+|nuORF	ENST00000594954.5_1_19:35820289-35820811:+|nuORF	ENST00000594954.5_1_19:35820289-35820811:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2432861328125	2	480.243264	958.471974	0.15617	7.4998E-05	-0.12994	-6.2404E-05	0.026223	1.2593E-05	480.2430582495673	32.784	0.59089	32.996	32.68	33.271	0.21168					36	13	4	0	0	0	0.55097	1	2354	2354		49.442	3.4896	1	925400			25442	14323	17149	17159	29075	29075					-0.008922973501853448
LARPGPPP	8	Unmodified	_LARPGPPP_					0	0	0		ENSG00000043591|ENST00000369295|ADRB1	ENSG00000043591|ENST00000369295|ADRB1	ENSG00000043591|ENST00000369295|ADRB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.7391357421875	2	402.739963	803.465373	-0.073434	-2.9575E-05	-1.3891	-0.00055944	-1.4625	-0.00058901	402.7394481773092	35.645	1.7843	35.585	35.254	37.038	-0.060333					86	50	3	0	0	0	0.83466	1	1917	1917		23.037	1.3344	1	243330			25443	944	17150	17160	29076	29076					0.05577854279761141
LARPGRGGR	9	Unmodified	_LARPGRGGR_					0	0	0			REV__ENST00000369774.8_3_10:105358349-105358463:-|nuORF	REV__ENST00000369774.8_3_10:105358349-105358463:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2554626464844	2	470.283392	938.552231	-0.45579	-0.00021435	3.2384	0.001523	2.7826	0.0013086	470.28491747832624	30.378	0.39441	30.382	30.185	30.579	0.0037212					18	8	3	0	0	0	0.20789	1	2008	2008		29.15	0	1	166260	+		25444	25630	17151	17161	29077	29077					0.08049653554189717
LARPPCSASS	10	Unmodified	_LARPPCSASS_					0	0	0			REV__ENST00000368704.5_1_1:153579638-153580001:-|nuORF	REV__ENST00000368704.5_1_1:153579638-153580001:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.74359130859375	2	494.747659	987.480765	1.0031	0.00049629	-4.1925	-0.0020742	-3.1894	-0.001578	494.74542470137317	19.776	0.3728	19.847	19.665	20.038	0.071127					30	14	3	0	0	0	0.86218	1	426	426		32.812	0.85756	1	78653	+		25445	25604	17152	17162	29078	29078					-0.01347646985357187
LARRISSA	8	Unmodified	_LARRISSA_					0	0	0		ENSG00000170128|ENST00000304244|GPR25	ENSG00000170128|ENST00000304244|GPR25	ENSG00000170128|ENST00000304244|GPR25	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2657470703125	2	437.266876	872.519199	-2.1128	-0.00092385	-0.58974	-0.00025787	-2.7025	-0.0011817	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.884	1	841	841		33.516	6.7195	1	1366900			25446	6561	17153	17163	29079	29079					0.07784026711476599
LARSKLESL	9	Unmodified	_LARSKLESL_					0	0	0		nc|ENSG00000086712|Q9NUQ3-2|TXLNG;ENSG00000086712|ENST00000380122|TXLNG;ENSG00000084652|ENST00000373610|TXLNA;ENSG00000164440|ENST00000358430|TXLNB	nc|ENSG00000086712|Q9NUQ3-2|TXLNG	nc|ENSG00000086712|Q9NUQ3-2|TXLNG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8078308105469	2	508.808574	1015.60259	-0.31062	-0.00015805	-0.84428	-0.00042958	-1.1549	-0.00058762	508.80800447474485	82.779	1.2447	83.21	82.754	83.998	0.43108					73	29	4	0	0	0	0.76764	1	9602	9602		34.173	0.65696	1	3073800			25447	1520	17154	17164	29080	29080					0.09541718368666352
LARSLWISPR	10	Unmodified	_LARSLWISPR_					0	0	0			REV__ENST00000519948.3_1_12:74932833-74932950:+|nuORF	REV__ENST00000519948.3_1_12:74932833-74932950:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.23876953125	3	400.240018	1197.69823	1.895	0.00075847	-4.0256	-0.0016112	-2.1305	-0.00085272	400.2383943894667	17.925	0.51234	17.442	17.232	17.744	-0.48256					16	10	2	0	0	0	0.86647	1	317	317		28.577	2.5133	1	283060	+		25448	28092	17155	17165	29081	29081					0.1072849127954214
LARSSVAITV	10	Unmodified	_LARSSVAITV_					0	0	0			REV__ENSG00000116981|ENST00000235628|NT5C1A	REV__ENSG00000116981|ENST00000235628|NT5C1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.8084411621094	2	508.808574	1015.60259	-0.055595	-2.8287E-05	-1.6183	-0.00082341	-1.6739	-0.0008517	508.8077132921667	83.422	2.5883	83.489	82.396	84.985	0.066719					89	59	2	0	0	0	0.86471	1	8346	8346		30.318	3.6248	1	2642300	+		25449	18236	17156	17166	29082	29082					0.09541718368654983
LARSYVKLMI	10	Unmodified	_LARSYVKLMI_					0	0	0			REV__nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18	REV__nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3580932617188	2	597.357376	1192.7002	3.0849	0.0018428	-1.397	-0.00083449	1.688	0.0010083	597.3562180293547	100.36	3.052	100.31	99.202	102.25	-0.052116					175	71	4	0	0	0	0.85939	1	10852	10852		23.042	1.0826	1	3981300	+		25450	29754	17157	17167	29083	29083					0.11155783973163125
LARTGTDEP	9	Unmodified	_LARTGTDEP_					0	0	0			REV__ENSG00000274286|ENST00000620793|ADRA2B	REV__ENSG00000274286|ENST00000620793|ADRA2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2435302734375	2	480.243264	958.471974	0.66014	0.00031703	-0.78822	-0.00037854	-0.12808	-6.1508E-05	480.24276597452007	32.804	0.63803	32.931	32.59	33.228	0.12643					33	14	3	0	0	0	0.35373	1	2338	2338		60.972	0.85368	1	770060	+		25451	23999	17158	17168	29084	29084					-0.008922973501967135
LARTLNTAPP	10	Unmodified	_LARTLNTAPP_					0	0	0			REV__nc|ENSG00000185621|Q96KR4-2|LMLN	REV__nc|ENSG00000185621|Q96KR4-2|LMLN	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	527.3048095703125	2	527.306198	1052.59784	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.21	1	119.12	118.62	119.62	-0.088509								0	0	0	0.45132	1	12869	12869		25.574	5.0922	1		+		25452	22780	17159	17169	29085	29085					0.07364834225904815
LARTVTLYLFL	11	Unmodified	_LARTVTLYLFL_					0	0	0		ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26788330078125	3	437.267463	1308.78056	-1.7231	-0.00075344	2.6013	0.0011375	0.87824	0.00038403	437.26850375985913	50.916	1.5264	50.916	50.06	51.586	0					171	39	5	0	0	0	0.73621	1	4084	4084		25.126	4.0938	1	3001200			25453	9839	17160	17170	29086	29086					0.13851968567837503
LARTVTLYLFL	11	Unmodified	_LARTVTLYLFL_					0	0	0		ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26751708984375	3	437.267463	1308.78056	-0.68964	-0.00030156	1.4499	0.00063399	0.76026	0.00033244	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.74405	1	4878	4878		23.378	4.1152	1	2651700			25454	9839	17160	17170	29087	29087					0.13851968567837503
LARTVTLYLFL	11	Unmodified	_LARTVTLYLFL_					0	0	0		ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26800537109375	3	437.267463	1308.78056	0.28665	0.00012534	0.68054	0.00029758	0.96718	0.00042292	437.2676689275105	50.631	1.3868	50.681	50.015	51.402	0.049896					192	41	5	0	0	0	0.76251	1	3990	3990		19.263	1.7947	1	2963500			25455	9839	17160	17170	29088	29088					0.13851968567837503
LARTVTLYLFL	11	Unmodified	_LARTVTLYLFL_					0	0	0		ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2677001953125	3	437.267463	1308.78056	-0.49223	-0.00021524	1.4681	0.00064197	0.9759	0.00042673	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.73621	1	3985	3985		25.126	6.5949	1	3262400			25456	9839	17160	17170	29089	29089					0.13851968567837503
LARVEPPLK	9	Unmodified	_LARVEPPLK_					0	0	0		ENSG00000164070|ENST00000296464|HSPA4L	ENSG00000164070|ENST00000296464|HSPA4L	ENSG00000164070|ENST00000296464|HSPA4L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.8195495605469	2	511.821484	1021.62842	0.85791	0.0004391	-2.9794	-0.0015249	-2.1214	-0.0010858	511.81991312815825	15.819	0.17164	15.22	15.119	15.291	-0.59873					8	4	2	0	0	0	0.76255	1	57	57		35.618	1.4457	1	64755			25457	5910	17161	17171	29090	29090					0.11846612610941065
LARYDIKAL	9	Unmodified	_LARYDIKAL_					0	0	0		ENSG00000147613|ENST00000276616|PSKH2	ENSG00000147613|ENST00000276616|PSKH2	ENSG00000147613|ENST00000276616|PSKH2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8176879882812	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.78536	1	8137	8137		29.15	1.2673	1	859730			25458	4916	17162	17172	29091	29091					0.09498308748334239
LASALAPSI	9	Unmodified	_LASALAPSI_					0	0	0		ENSG00000104738|ENST00000649973|MCM4;chr8:47971189-47971341|51|12.25|0.39|4.97|+|ENST00000648554|MCM4,MCM4	ENSG00000104738|ENST00000649973|MCM4	ENSG00000104738|ENST00000649973|MCM4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7521667480469	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.94	1	76.993	76.493	77.493	0.052696								0	0	0	0.30053	1	7448	7448		30.504	1.3541	1				25459	2144	17163	17173	29092	29092					0.06383284011531032
LASASSVLH	9	Unmodified	_LASASSVLH_					0	0	0			REV__ENST00000261497.8_1_17:20905229-20905559:-|nuORF	REV__ENST00000261497.8_1_17:20905229-20905559:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7446594238281	2	442.745442	883.476331	0.39735	0.00017592	-1.8334	-0.00081175	-1.4361	-0.00063583	442.74450802650625	89.278	0.7365	89.729	89.448	90.184	0.45058					60	17	4	0	0	0	0.72402	1	10519	10519		38.806	5.2906	1	3535200	+		25460	24394	17164	17174	29093	29093					0.02993211863383749
LASDAVLQI	9	Unmodified	_LASDAVLQI_					0	0	0			REV__ENSG00000185306|ENST00000543942|C12orf56	REV__ENSG00000185306|ENST00000543942|C12orf56	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.2680358886719	2	465.26875	928.522947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.272	1	80.215	79.715	80.715	-0.056503								0	0	0	0.2969	1	8060	8060		31.955	0	1		+		25461	22759	17165	17175	29094	29094					0.05582651694669494
LASDEFTSF	9	Unmodified	_LASDEFTSF_					0	0	0			REV__ENSG00000172238|ENST00000306011|ATOH1	REV__ENSG00000172238|ENST00000306011|ATOH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7727966308594	2	508.732197	1015.44984	-0.18163	-9.24E-05	-0.89202	-0.0004538	-1.0736	-0.0005462	508.73188422253355	75.026	0.87136	75.418	74.993	75.864	0.3911					26	20	2	0	0	0	0.20789	1	8491	8491		65.803	7.0212	1	265520	+		25462	21812	17166	17176	29095	29095					-0.057265218186103084
LASENGNC	8	Unmodified	_LASENGNC_					0	0	0			REV__ENSG00000177575|ENST00000432237|CD163	REV__ENSG00000177575|ENST00000432237|CD163	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.1704406738281	2	404.16871	806.322867	1.2665	0.00051189	1.33	0.00053756	2.5966	0.0010494	404.16957479262703	77.837	2.6073	78.242	77.72	80.327	0.40531					162	61	5	0	0	0	0.85277	1	8925	8925		25.45	0	1	19504000	+		25463	22219	17167	17177	29096	29096					-0.08804146244585809
LASFVLVNLTG	11	Unmodified	_LASFVLVNLTG_					0	0	0		ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.329833984375	2	567.331882	1132.64921	-0.54401	-0.00030863	-2.6363	-0.0014957	-3.1803	-0.0018043	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.72739	1	8858	8858		27.047	0.3544	1	4477200			25464	6860	17168	17178	29097	29097					0.0881915819995811
LASFVLVNLTG	11	Unmodified	_LASFVLVNLTG_					0	0	0		ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.329833984375	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.66929	2	9168	9168;9252		36.447	3.6343	1	11042000			25465	6860	17168	17178	29098;29099	29098					0.0881915819995811
LASFVLVNLTG	11	Unmodified	_LASFVLVNLTG_					0	0	0		ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3294677734375	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.62614	4	9705	9573;9705;9790;9802		41.427	3.596	1	15673000			25466	6860	17168	17178	29100;29101;29102;29103	29101					0.0881915819995811
LASFVLVNLTG	11	Unmodified	_LASFVLVNLTG_					0	0	0		ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3296508789062	2	567.331882	1132.64921	0.48094	0.00027285	-3.8594	-0.0021896	-3.3785	-0.0019167	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.66009	2	9040	8981;9040		37.508	8.3381	1	6590100			25467	6860	17168	17178	29104;29105	29105					0.0881915819995811
LASFVLVNLTG	11	Unmodified	_LASFVLVNLTG_					0	0	0		ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.57736	3	9268	9256;9268;9569		46.457	13.644	1	18558000			25468	6860	17168	17178	29106;29107;29108	29107					0.0881915819995811
LASFVLVNLTG	11	Unmodified	_LASFVLVNLTG_					0	0	0		ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.32958984375	2	567.331882	1132.64921	-1.3957	-0.00079181	-1.9666	-0.0011157	-3.3623	-0.0019075	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.7144	1	8998	8998		29.17	0.020503	1	5956400			25469	6860	17168	17178	29109	29109					0.0881915819995811
LASFVLVNLTG	11	Unmodified	_LASFVLVNLTG_					0	0	0		ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.330078125	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.7144	3	9273	9273;9333;9394		29.17	3.5246	1	17338000			25470	6860	17168	17178	29110;29111;29112	29110					0.0881915819995811
LASFVLVNLTG	11	Unmodified	_LASFVLVNLTG_					0	0	0		ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.327880859375	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.66929	1	11158	11158		36.447	1.2947	1	6007000			25471	6860	17168	17178	29113	29113					0.0881915819995811
LASHDQVVE	9	Unmodified	_LASHDQVVE_					0	0	0			REV__ENSG00000198954|ENST00000361983|KIFBP	REV__ENSG00000198954|ENST00000361983|KIFBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.2503662109375	2	499.251089	996.487624	-0.12384	-6.1825E-05	-0.2059	-0.0001028	-0.32973	-0.00016462	499.25083033219846	54.708	0.54705	55.115	54.781	55.328	0.40663					30	12	4	0	0	0	0.30689	1	5576	5576		64.207	6.396	1	654490	+		25472	23428	17169	17179	29114	29114					-0.010760108331396623
LASIAAPLS	9	Unmodified	_LASIAAPLS_					0	0	0			REV__ENST00000471941.5_1_10:45479206-45479773:+|nuORF	REV__ENST00000471941.5_1_10:45479206-45479773:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.7523498535156	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.102	1	77.194	76.694	77.694	0.091438								0	0	0	0.30416	1	7200	7200		29.15	0	1		+		25473	27246	17170	17180	29115	29115					0.06383284011531032
LASILAPGT	9	Unmodified	_LASILAPGT_					0	0	0			REV__ENSG00000131067|ENST00000336431|GGT7	REV__ENSG00000131067|ENST00000336431|GGT7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.7528076171875	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.77546	1	7179	7179		31.955	1.4512	1	423780	+		25474	18934	17171	17181	29116	29116					0.06383284011531032
LASKKCSH	8	Unmodified	_LASKKCSH_					0	0	0		ENSG00000145536|ENST00000274181|ADAMTS16	ENSG00000145536|ENST00000274181|ADAMTS16	ENSG00000145536|ENST00000274181|ADAMTS16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26715087890625	2	437.234187	872.453822	0.30827	0.00013479	-3.745	-0.0016375	-3.4368	-0.0015027	437.2324623110155	53.163	0.88696	53.233	52.791	53.678	0.070713					39	25	3	0	0	0	0.4196	1	4332	4332		26.693	0	1	109100			25475	4775	17172	17182	29117	29117					0.012492891941178641
LASLLSPGSV	10	Unmodified	_LASLLSPGSV_					0	0	0		ENST00000498749.1_1_2:73114531-73115553:+|nuORF;ENSG00000116096|ENST00000234454|SPR	ENST00000498749.1_1_2:73114531-73115553:+|nuORF	ENST00000498749.1_1_2:73114531-73115553:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2767028808594	2	472.276575	942.538597	0.18837	8.8961E-05	0.021278	1.0049E-05	0.20964	9.901E-05	472.2764071960003	36.972	1.2427	37.458	37.078	38.321	0.48581					62	30	4	0	0	0	0.4892	1	2980	2980		56.721	3.7844	1	1333500			25476	2897	17173	17183	29118	29118					0.0650293821172454
LASPARSHLYH	11	Unmodified	_LASPARSHLYH_					0	0	0		nc|ENSG00000067141|Q92859-4|NEO1;ENSG00000067141|ENST00000261908|NEO1	nc|ENSG00000067141|Q92859-4|NEO1	nc|ENSG00000067141|Q92859-4|NEO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3333129882812	2	626.333279	1250.652	-0.96726	-0.00060583	0.24106	0.00015098	-0.7262	-0.00045484	626.3333261036785	43.059	0.81004	43.023	42.595	43.405	-0.035816					50	18	4	0	0	0	0.60888	1	3326	3326		41.427	11.109	1	287350			25477	1176	17174	17184	29119	29119					0.036704263774709034
LASPDGLNGA	10	Unmodified	_LASPDGLNGA_					0	0	0			REV__ENST00000336273.7_1_8:98656420-98656720:+|nuORF	REV__ENST00000336273.7_1_8:98656420-98656720:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.732421875	2	457.732532	913.45051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.12	1	30.149	29.649	30.649	0.028618								0	0	0	0.45132	1	1948	1948		54.776	5.3348	1		+		25478	25185	17175	17185	29120	29120					-0.009676823789050104
LASPLLPL	8	Unmodified	_LASPLLPL_					0	0	0			REV__ENST00000575801.5_2_17:703870-704173:-|nuORF	REV__ENST00000575801.5_2_17:703870-704173:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.58416748046875	2	412.268022	822.521491	1.5525	0.00064005	-4.4008	-0.0018143	-2.8483	-0.0011743	412.26606388685457	21.214	0.76361	20.759	20.505	21.269	-0.45436					23	17	2	0	0	0	0.4196	1	777	777		13.775	0	1	41209	+		25479	28987	17176	17186	29121	29121					0.103130623965626
LASQEARY	8	Unmodified	_LASQEARY_					0	0	0		ENSG00000196778|ENST00000641528|OR52K1;ENSG00000181963|ENST00000325719|OR52K2	ENSG00000196778|ENST00000641528|OR52K1	ENSG00000196778|ENST00000641528|OR52K1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	469.24072265625	2	469.240524	936.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.49	1	64.49	63.99	64.99	0								0	0	0	0.30252	1	5670	5670		19.36	0	1				25480	8101	17177	17187	29122	29122					-0.004279761419979877
LASQSIRITG	10	Unmodified	_LASQSIRITG_					0	0	0		ENSG00000283654|ENST00000637218|CIROP	ENSG00000283654|ENST00000637218|CIROP	ENSG00000283654|ENST00000637218|CIROP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3036499023438	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.86348	1	8791	8791		31.53	3.4483	1	9288900			25481	9061	17178	17188	29123	29123					0.07224530363282611
LASQSIRITG	10	Unmodified	_LASQSIRITG_					0	0	0		ENSG00000283654|ENST00000637218|CIROP	ENSG00000283654|ENST00000637218|CIROP	ENSG00000283654|ENST00000637218|CIROP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3036499023438	2	523.303655	1044.59276	-0.041135	-2.1526E-05	0.095535	4.9994E-05	0.054401	2.8468E-05	523.30361738985	91.645	2.4487	91.714	91.431	93.88	0.06987					99	57	2	0	0	0	0.70553	1	9439	9439		44.377	1.981	1	1067500			25482	9061	17178	17188	29124	29124					0.07224530363282611
LASQSIRITG	10	Unmodified	_LASQSIRITG_					0	0	0		ENSG00000283654|ENST00000637218|CIROP	ENSG00000283654|ENST00000637218|CIROP	ENSG00000283654|ENST00000637218|CIROP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3034057617188	2	523.303655	1044.59276	0.60955	0.00031898	-0.6954	-0.00036391	-0.085851	-4.4926E-05	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.8545	1	10022	10022		36.447	2.9312	1	4023800			25483	9061	17178	17188	29125	29125					0.07224530363282611
LASSDVRAPQR	11	Unmodified	_LASSDVRAPQR_					0	0	0		ENST00000339303.5_16:18434460-18437593:-|nuORF;ENST00000541836.5_1_16:15021147-15029115:+|nuORF	ENST00000339303.5_16:18434460-18437593:-|nuORF	ENST00000339303.5_16:18434460-18437593:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.5549011230469	3	400.554554	1198.64183	-0.40516	-0.00016229	1.6309	0.00065327	1.2257	0.00049098	400.5551654184751	16.804	0.22807	16.725	16.573	16.801	-0.079056					10	8	2	0	0	0	0.74022	1	156	156		24.232	0.70912	1	31621			25484	10218	17179	17189	29126	29126					0.05045818652206435
LASSRHGRNFV	11	Unmodified	_LASSRHGRNFV_					0	0	0		ENST00000481597.5_1_3:50356335-50357944:-|nuORF;ENSG00000068001|ENST00000357750|HYAL2	ENST00000481597.5_1_3:50356335-50357944:-|nuORF	ENST00000481597.5_1_3:50356335-50357944:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.33642578125	2	622.336353	1242.65815	2.9643	0.0018448	-2.8995	-0.0018045	0.064811	4.0334E-05	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.76579	1	12354	12354		5.5578	0	1	435720			25485	1192	17180	17190	29127	29127					0.04652944608983489
LASTLLMLVA	10	Unmodified	_LASTLLMLVA_					0	0	0			REV__nc|ENSG00000113073|Q96Q91-4|SLC4A9	REV__nc|ENSG00000113073|Q96Q91-4|SLC4A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.8169555664062	2	516.312103	1030.60965	3.1012	0.0016012	0.56309	0.00029073	3.6643	0.0018919	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.85438	1	13072	13072		16.473	0	1	1162600	+		25486	17976	17181	17191	29128	29128					0.09557314924882121
LASTPPRKSA	10	Unmodified	_LASTPPRKSA_					0	0	0		nc|ENSG00000164663|Q70CQ1-2|USP49;ENSG00000164663|ENST00000682992|USP49	nc|ENSG00000164663|Q70CQ1-2|USP49	nc|ENSG00000164663|Q70CQ1-2|USP49	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.29833984375	2	514.298373	1026.58219	-0.73299	-0.00037698	1.1638	0.00059853	0.43078	0.00022155	514.2990191535417	96.746	3.1495	96.746	95.529	98.678	0					118	74	2	0	0	0	0.8651	1	9662	9662		25.574	2.5316	1	424760			25487	5987	17182	17192	29129	29129					0.0699654770885445
LASTPPRKSA	10	Unmodified	_LASTPPRKSA_					0	0	0		nc|ENSG00000164663|Q70CQ1-2|USP49;ENSG00000164663|ENST00000682992|USP49	nc|ENSG00000164663|Q70CQ1-2|USP49	nc|ENSG00000164663|Q70CQ1-2|USP49	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.2974853515625	2	514.298373	1026.58219	0.73156	0.00037624	-1.0406	-0.00053517	-0.30902	-0.00015893	514.2979640556221	96.413	1.8767	96.461	95.25	97.127	0.047798					96	43	4	0	0	0	0.8651	1	10208	10208		25.574	1.0549	1	532700			25488	5987	17182	17192	29130	29130					0.0699654770885445
LASVGPDKL	9	Unmodified	_LASVGPDKL_					0	0	0			REV__ENST00000599359.1_1_19:6669941-6670130:-|nuORF	REV__ENST00000599359.1_1_19:6669941-6670130:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.260498046875	2	450.263468	898.512382	-1.3168	-0.00059292	-1.4351	-0.00064616	-2.7519	-0.0012391	450.26266605332285	40.083	0.97701	40.672	40	40.977	0.58915					56	23	3	0	0	0	0.51307	1	3406	3406		51.335	1.8939	1	1196000	+		25489	29296	17183	17193	29131	29131					0.05906669040234647
LASVIMPASI	10	Unmodified	_LASVIMPASI_					0	0	0			REV__ENST00000542519.1_1_12:6782380-6787618:-|nuORF	REV__ENST00000542519.1_1_12:6782380-6787618:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2904052734375	2	501.288628	1000.5627	-0.28392	-0.00014233	3.869	0.0019395	3.5851	0.0017972	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.8608	1	9991	9991		34.173	1.3601	1	9038000	+		25490	18711	17184	17194	29132	29132					0.06244455373735036
LASVLLYS	8	Unmodified	_LASVLLYS_					0	0	0		ENSG00000068120|ENST00000393818|COASY;nc|ENSG00000068120|Q13057-2|COASY	ENSG00000068120|ENST00000393818|COASY	ENSG00000068120|ENST00000393818|COASY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.2558288574219	2	433.255111	864.49567	-0.16825	-7.2895E-05	-0.65993	-0.00028592	-0.82818	-0.00035881	433.25555494708175	107.35	1.0528	107.31	106.77	107.82	-0.034409					102	24	6	0	0	0	0.88915	1	11679	11679		35.201	6.9464	1	61129000			25491	1197	17185	17195	29133	29133					0.05800168154280527
LASVLLYS	8	Unmodified	_LASVLLYS_					0	0	0		ENSG00000068120|ENST00000393818|COASY;nc|ENSG00000068120|Q13057-2|COASY	ENSG00000068120|ENST00000393818|COASY	ENSG00000068120|ENST00000393818|COASY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.25531005859375	2	433.255111	864.49567	2.7182	0.0011777	-3.4266	-0.0014846	-0.70837	-0.00030691	433.2543702716111	107.32	1.0507	107.28	106.79	107.84	-0.034134					105	24	6	0	0	0	0.88915	1	11888	11888		35.201	0	1	62658000			25492	1197	17185	17195	29134	29134					0.05800168154280527
LASYSATS	8	Unmodified	_LASYSATS_					0	0	0		ENST00000450728.1_1_2:200332930-200334494:+|nuORF	ENST00000450728.1_1_2:200332930-200334494:+|nuORF	ENST00000450728.1_1_2:200332930-200334494:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.19708251953125	2	400.195251	798.375948	0.9179	0.00036734	-0.83352	-0.00033357	0.084388	3.3772E-05	400.1951514766141	86.536	1.7122	86.462	86.013	87.725	-0.073769					84	39	4	0	0	0	0.87922	1	8996	8996		31.955	1.4512	1	3325200			25493	11893	17186	17196	29135	29135					-0.03130445190288356
LATADDSD	8	Unmodified	_LATADDSD_					0	0	0			REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF	REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.170166015625	2	404.171973	806.329392	-1.8319	-0.00074042	-2.7196	-0.0010992	-4.5516	-0.0018396	404.17089024317255	78.364	3.0861	78.491	77.697	80.783	0.12695					160	99	2	0	0	0	0.86288	2	7402	7384;7402		33.516	3.7594	1	7642900	+		25494	20199	17187	17197	29136;29137	29137					-0.08151929812231629
LATADDSD	8	Unmodified	_LATADDSD_					0	0	0			REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF	REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.1701354980469	2	404.171973	806.329392	-1.5918	-0.00064335	-3.287	-0.0013285	-4.8787	-0.0019719	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.87922	2	7345	7345;7370		33.516	8.0654	1	6183600	+		25495	20199	17187	17197	29138;29139	29138					-0.08151929812231629
LATDFIQSL	9	Unmodified	_LATDFIQSL_					0	0	0		ENSG00000081320|ENST00000263955|STK17B	ENSG00000081320|ENST00000263955|STK17B	ENSG00000081320|ENST00000263955|STK17B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.2741394042969	2	504.274032	1006.53351	-0.30223	-0.00015241	-0.28828	-0.00014537	-0.59051	-0.00029778	504.27373611544994	85.735	1.1086	86.178	85.743	86.852	0.44331					61	26	4	0	0	0	9.502000000000001E-29	4	10016	10004;10016;10028;10040		185.55	50.739	1	3651500			25496	1464	17188	17198	29140;29141;29142;29143	29141					0.0305063434910835
LATDFIQSL	9	Unmodified	_LATDFIQSL_					0	0	0		ENSG00000081320|ENST00000263955|STK17B	ENSG00000081320|ENST00000263955|STK17B	ENSG00000081320|ENST00000263955|STK17B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.2740173339844	2	504.274032	1006.53351	0.10676	5.3834E-05	-0.91139	-0.00045959	-0.80464	-0.00040576	504.27335232217604	85.755	1.2313	86.203	85.822	87.054	0.44736					66	29	5	0	0	0	1.2735E-13	4	10073	10039;10049;10061;10073		171.53	23.489	1	4002500			25497	1464	17188	17198	29144;29145;29146;29147	29147					0.0305063434910835
LATEQDQY	8	Unmodified	_LATEQDQY_					0	0	0			REV__nc|ENSG00000101811|P33240-2|CSTF2	REV__nc|ENSG00000101811|P33240-2|CSTF2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.23651123046875	2	484.221997	966.429441	-1.5812	-0.00076566	0.91884	0.00044492	-0.66238	-0.00032074	484.2224980236694	85.539	0.34361	85.697	85.503	85.847	0.15851					13	7	2	0	0	0	0.4196	1	8302	8302		65.803	19.851	1	42658	+		25498	17303	17189	17199	29148	29148					-0.05511692478432906
LATGDKGGRV	10	Unmodified	_LATGDKGGRV_					0	0	0		ENSG00000221914|ENST00000380737|PPP2R2A;nc|ENSG00000221914|P63151-2|PPP2R2A;ENST00000507028.1_1_4:6382108-6382780:-|nuORF;ENST00000521484.5_1_8:26151159-26197424:+|nuORF;ENST00000522482.5_1_8:26151222-26212062:+|nuORF;nc|ENSG00000156475|Q00005-6|PPP2R2B;ENSG00000156475|ENST00000394411|PPP2R2B;nc|ENSG00000156475|Q00005-2|PPP2R2B;nc|ENSG00000156475|Q00005-3|PPP2R2B;ENSG00000175470|ENST00000455566|PPP2R2D;nc|ENSG00000156475|Q00005-4|PPP2R2B;nc|ENSG00000156475|Q00005-5|PPP2R2B;nc|ENSG00000156475|Q00005-7|PPP2R2B;nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C;nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C;ENSG00000074211|ENST00000382599|PPP2R2C	ENSG00000221914|ENST00000380737|PPP2R2A;nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.2748718261719	2	487.274898	972.535243	-0.74968	-0.0003653	1.2311	0.00059989	0.48142	0.00023459	487.2757927615724	27.963	0.5195	27.867	27.619	28.139	-0.096947					31	11	4	0	0	0	0.81117	1	1662	1662		38.754	6.7987	1	182210			25499	8682;1305	17190	17200	29149	29149					0.047876881577167296
LATGIKKSG	9	Unmodified	_LATGIKKSG_					0	0	0			REV__ENST00000495458.5_1_5:176729278-176730108:-|nuORF	REV__ENST00000495458.5_1_5:176729278-176730108:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713928222656	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.7932	1	2947	2947		13.454	2.5885	1	13476000	+		25500	27230	17191	17201	29150	29150					0.0865437527713766
LATGPRVLGI	10	Unmodified	_LATGPRVLGI_					0	0	0			REV__ENSG00000096696|ENST00000379802|DSP	REV__ENSG00000096696|ENST00000379802|DSP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.812744140625	2	498.813659	995.612765	-0.10162	-5.0691E-05	-0.36141	-0.00018027	-0.46303	-0.00023097	498.81327147047574	76.187	0.64577	76.755	76.392	77.038	0.56835					27	15	3	0	0	0	0.80179	1	8676	8676		39.253	7.723	1	224370	+		25501	17077	17192	17202	29151	29151					0.114783260938907
LATHAPKALV	10	Unmodified	_LATHAPKALV_					0	0	0			REV__ENSG00000133961|ENST00000555238|NUMB	REV__ENSG00000133961|ENST00000555238|NUMB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.3093566894531	2	510.813659	1019.61277	0.62483	0.00031917	-1.7816	-0.00091006	-1.1568	-0.00059089	510.8124954231215	79.936	0.58498	80.077	79.725	80.31	0.14117					45	27	2	0	0	0	0.82886	1	7593	7593		37.812	2.1932	1	97467	+		25502	19105	17193	17203	29152	29152					0.10374326093904074
LATIEPNVN	9	Unmodified	_LATIEPNVN_					0	0	0			REV__nc|ENSG00000164118|Q9C0F1-2|CEP44	REV__nc|ENSG00000164118|Q9C0F1-2|CEP44	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2870788574219	2	485.763832	969.513111	-0.35652	-0.00017318	0.54732	0.00026587	0.1908	9.2684E-05	485.7641039580604	53.004	0.5777	53.619	53.324	53.902	0.61436					22	13	2	0	0	0	0.20789	1	5336	5336		26.693	0	1	394870	+		25503	29988	17194	17204	29153	29153					0.027134636892810704
LATIPLTVV	9	Unmodified	_LATIPLTVV_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-4|ADGRV1;nc|ENSG00000164199|Q8WXG9-3|ADGRV1;ENST00000504142.2_2_5:89924394-89949789:+|nuORF	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8005065917969	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	1	2787	2787		24.203	1.1603	1	489490			25504	5938	17195	17205	29154	29154					0.11905003113804469
LATIPLTVV	9	Unmodified	_LATIPLTVV_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-4|ADGRV1;nc|ENSG00000164199|Q8WXG9-3|ADGRV1;ENST00000504142.2_2_5:89924394-89949789:+|nuORF	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.79901123046875	2	463.799686	925.584819	-1.356	-0.00062891	2.7368	0.0012693	1.3808	0.00064042	463.8008126700971	41.516	1.4901	41.52	41.125	42.615	0.003418					87	36	3	0	0	0	0.7932	1	3080	3080		24.203	11.244	1	533600			25505	5938	17195	17205	29155	29155					0.11905003113804469
LATIPLTVV	9	Unmodified	_LATIPLTVV_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-4|ADGRV1;nc|ENSG00000164199|Q8WXG9-3|ADGRV1;ENST00000504142.2_2_5:89924394-89949789:+|nuORF	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.798583984375	2	463.799686	925.584819	-1.1343	-0.00052608	3.785	0.0017555	2.6507	0.0012294	463.8012667988253	46.183	0.63174	46.199	45.791	46.422	0.015514					31	18	2	0	0	0	0.7932	1	3358	3358		23.042	3.6825	1	155340			25506	5938	17195	17205	29156	29156					0.11905003113804469
LATIPLTVV	9	Unmodified	_LATIPLTVV_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-4|ADGRV1;nc|ENSG00000164199|Q8WXG9-3|ADGRV1;ENST00000504142.2_2_5:89924394-89949789:+|nuORF	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8000793457031	2	463.799686	925.584819	0.23374	0.00010841	1.7317	0.00080317	1.9655	0.00091158	463.8003055874184	41.421	1.4891	41.495	41.009	42.498	0.073418					84	40	3	0	0	0	0.7932	1	2699	2699		24.203	0	1	378670			25507	5938	17195	17205	29157	29157					0.11905003113804469
LATPALVY	8	Unmodified	_LATPALVY_					0	0	0		nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	424.2503967285156	2	424.249829	846.485105	-0.96204	-0.00040814	1.4699	0.00062359	0.50782	0.00021544	424.25046651193156	107.31	0.79755	107.31	106.93	107.73	0					66	18	4	0	0	0	0.87807	1	11144	11144		31.579	1.7373	1	4999300			25508	15323	17196	17206	29158	29158					0.055721854998637355
LATPALVY	8	Unmodified	_LATPALVY_					0	0	0		nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.25030517578125	2	424.249829	846.485105	-1.706	-0.00072376	2.169	0.0009202	0.46303	0.00019644	424.25084756935905	107.01	1.1995	107.14	106.73	107.93	0.13867					96	29	5	0	0	0	0.90645	1	11473	11473		41.208	2.1869	1	11083000			25509	15323	17196	17206	29159	29159					0.055721854998637355
LATPALVY	8	Unmodified	_LATPALVY_					0	0	0		nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.25006103515625	2	424.249829	846.485105	-1.8671	-0.00079214	2.2977	0.00097481	0.43057	0.00018267	424.250891156039	107.16	1.149	107.19	106.72	107.87	0.036125					99	27	5	0	0	0	0.87807	1	11444	11444		31.579	1.7373	1	9677200			25510	15323	17196	17206	29160	29160					0.055721854998637355
LATPALVY	8	Unmodified	_LATPALVY_					0	0	0		nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.25042724609375	2	424.249829	846.485105	2.211	0.00093801	-1.2738	-0.00054042	0.93718	0.0003976	424.249377193164	107.05	1.1854	107.15	106.72	107.9	0.10396					163	44	6	0	0	0	0.87807	2	13058	13058;13093		39.021	1.993	1	22757000			25511	15323	17196	17206	29161;29162	29161					0.055721854998637355
LATPALVY	8	Unmodified	_LATPALVY_					0	0	0		nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	nc|ENSG00000284491|A0A1W2PP97|THSD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.25018310546875	2	424.249829	846.485105	4.6708	0.0019816	-3.7108	-0.0015743	0.95999	0.00040727	424.2483274707268	107.02	1.3116	107.17	106.66	107.97	0.14929					169	50	5	0	0	0	0.87807	2	13059	13059;13070		31.579	1.7373	1	20368000			25512	15323	17196	17206	29163;29164	29163					0.055721854998637355
LATQQLQV	8	Unmodified	_LATQQLQV_					0	0	0			REV__ENST00000462978.1_1_1:155697405-155697462:+|nuORF	REV__ENST00000462978.1_1_1:155697405-155697462:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.76251220703125	2	450.761092	899.507631	-1.3461	-0.00060678	1.5457	0.00069675	0.19961	8.9978E-05	450.76163292846263	37.672	0.59956	37.689	37.398	37.997	0.016563					33	19	2	0	0	0	0.90837	1	2173	2173		56.721	5.3856	1	175230	+		25513	27068	17197	17207	29165	29165					0.05385784897475787
LATQQLQV	8	Unmodified	_LATQQLQV_					0	0	0			REV__ENST00000462978.1_1_1:155697405-155697462:+|nuORF	REV__ENST00000462978.1_1_1:155697405-155697462:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7605895996094	2	450.761092	899.507631	0.18364	8.278E-05	-0.15966	-7.1969E-05	0.023983	1.0811E-05	450.7609047940763	37.497	0.57988	37.596	37.313	37.893	0.099277					37	20	2	0	0	0	0.93293	1	2142	2142		51.335	7.2187	1	199610	+		25514	27068	17197	17207	29166	29166					0.05385784897475787
LATQQLQV	8	Unmodified	_LATQQLQV_					0	0	0			REV__ENST00000462978.1_1_1:155697405-155697462:+|nuORF	REV__ENST00000462978.1_1_1:155697405-155697462:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7605285644531	2	450.761092	899.507631	0.017655	7.9582E-06	0.41552	0.0001873	0.43317	0.00019526	450.76097096710026	37.587	0.61326	37.529	37.238	37.851	-0.057915					36	21	2	0	0	0	0.66521	1	2173	2173		68.787	12.066	1	186270	+		25515	27068	17197	17207	29167	29167					0.05385784897475787
LATRNMNN	8	Unmodified	_LATRNMNN_					0	0	0			REV__ENSG00000189045|ENST00000601380|ANKDD1B	REV__ENSG00000189045|ENST00000601380|ANKDD1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.71441650390625	2	467.232176	932.449799	-0.44519	-0.00020801	3.038	0.0014194	2.5928	0.0012114	467.23348368031435	69.748	1.0482	70.132	69.909	70.957	0.38416					38	28	2	0	0	0	0.4196	1	7767	7767		31.955	19.748	1	305600	+		25516	23058	17198	17208	29168	29168					-0.01912800299612627
LATRTPPK	8	Unmodified	_LATRTPPK_					0	0	0		nc|ENSG00000157181|Q5SWX8-3|ODR4;nc|ENSG00000157181|Q5SWX8-4|ODR4;nc|ENSG00000157181|Q5SWX8-2|ODR4;ENSG00000157181|ENST00000287859|ODR4	nc|ENSG00000157181|Q5SWX8-3|ODR4	nc|ENSG00000157181|Q5SWX8-3|ODR4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2711181640625	2	442.271627	882.528701	0.072632	3.2123E-05	-0.92756	-0.00041023	-0.85493	-0.00037811	442.2710823318827	84.471	2.4316	84.918	83.971	86.403	0.44736					123	59	3	0	0	0	0.9283	1	9907	9907		49.442	1.5259	1	2524500			25517	5414	17199	17209	29169	29169					0.08273794996989636
LATSLRLIA	9	Unmodified	_LATSLRLIA_					0	0	0			REV__ENSG00000166508|ENST00000303887|MCM7	REV__ENSG00000166508|ENST00000303887|MCM7	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.30889892578125	2	479.30821	956.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.606	1	57.64	57.14	58.14	0.033905								0	0	0	0.32159	1	5249	5249		23.042	1.0826	1		+		25518	21300	17200	17210	29170	29170					0.12182923719603878
LATTPFLL	8	Unmodified	_LATTPFLL_					0	0	0		nc|ENSG00000083067|Q9HCF6-8|TRPM3;nc|ENSG00000083067|Q9HCF6-4|TRPM3;nc|ENSG00000083067|Q9HCF6-2|TRPM3;nc|ENSG00000083067|Q9HCF6-5|TRPM3;nc|ENSG00000083067|Q9HCF6-6|TRPM3;ENSG00000083067|ENST00000677713|TRPM3;nc|ENSG00000083067|Q9HCF6-7|TRPM3;nc|ENSG00000083067|Q9HCF6|TRPM3;nc|ENSG00000083067|Q9HCF6-11|TRPM3	nc|ENSG00000083067|Q9HCF6-8|TRPM3	nc|ENSG00000083067|Q9HCF6-8|TRPM3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2641906738281	2	438.265479	874.516405	-1.8646	-0.00081717	-3.5126	-0.0015394	-5.3771	-0.0023566	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.88915	1	3258	3258		35.201	6.9464	1	3384400			25519	1494	17201	17211	29171	29171					0.0741275853396246
LATVPLDI	8	Unmodified	_LATVPLDI_					0	0	0		ENSG00000178772|ENST00000323830|CPN2	ENSG00000178772|ENST00000323830|CPN2	ENSG00000178772|ENST00000323830|CPN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.2541809082031	2	421.255111	840.49567	-1.2322	-0.00051907	-1.5244	-0.00064217	-2.7566	-0.0011612	421.25432904467385	84.477	1.3086	84.477	83.963	85.271	0					69	29	3	0	0	0	0.85277	1	7968	7968		25.45	0	1	450410			25520	7222	17202	17212	29172	29172					0.06904168154278523
LATYYKRKRTK	11	Unmodified	_LATYYKRKRTK_					0	0	0		ENSG00000170006|ENST00000304385|TMEM154	ENSG00000170006|ENST00000304385|TMEM154	ENSG00000170006|ENST00000304385|TMEM154	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6236267089844	3	476.620899	1426.84087	2.8112	0.0013399	3.054	0.0014556	5.8652	0.0027955	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.84494	1	12460	12460		6.3209	0.31984	1	2689700			25521	6550	17203	17213	29173	29173					0.14452078950921532
LAVAFAAH	8	Unmodified	_LAVAFAAH_					0	0	0		nc|ENSG00000123096|Q14714-3|SSPN;ENSG00000123096|ENST00000242729|SSPN	nc|ENSG00000123096|Q14714-3|SSPN	nc|ENSG00000123096|Q14714-3|SSPN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2281799316406	2	400.226688	798.438824	1.1221	0.00044908	1.5017	0.000601	2.6237	0.0010501	400.22744040827075	52.487	1.5647	52.911	52.149	53.713	0.42348					74	37	3	0	0	0	0.84567	1	5254	5254		24.504	6.1796	1	9430900			25522	3259	17204	17214	29174	29174					0.031541653884119114
LAVAFAAH	8	Unmodified	_LAVAFAAH_					0	0	0		nc|ENSG00000123096|Q14714-3|SSPN;ENSG00000123096|ENST00000242729|SSPN	nc|ENSG00000123096|Q14714-3|SSPN	nc|ENSG00000123096|Q14714-3|SSPN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.22784423828125	2	400.226688	798.438824	-0.058285	-2.3327E-05	2.876	0.0011511	2.8177	0.0011277	400.2280059844884	52.237	1.9334	52.905	52.23	54.164	0.66729					76	46	3	0	0	0	0.84567	1	5256	5256		24.504	7.799	1	9506900			25523	3259	17204	17214	29175	29175					0.031541653884119114
LAVAIRSAMCY	11	Unmodified	_LAVAIRSAMCY_					0	0	0			REV__ENST00000570209.1_1_15:31127242-31129800:+|nuORF	REV__ENST00000570209.1_1_15:31127242-31129800:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3821411132812	2	599.309569	1196.60458	-1.3338	-0.00079933	4.13	0.0024751	2.7962	0.0016758	599.3118327359726	42.028	0.54232	42.442	42.163	42.706	0.4139					27	13	3	0	0	0	0.16822	1	3755	3755		29.17	0	1	929140	+		25524	28922	17205	17215	29176	29176					0.014146877906114241
LAVALFQVLPQ	11	Unmodified	_LAVALFQVLPQ_					0	0	0		nc|ENSG00000126895|P30518-2|AVPR2;ENSG00000126895|ENST00000646375|AVPR2;ENSG00000198049|ENST00000367126|AVPR1B	nc|ENSG00000126895|P30518-2|AVPR2	nc|ENSG00000126895|P30518-2|AVPR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2433776855469	3	400.244658	1197.71214	2.0925	0.0008375	-3.7683	-0.0015082	-1.6759	-0.00067075	400.24300696883114	21.638	0.9388	21.195	20.915	21.854	-0.44324					60	21	4	0	0	0	0.73621	1	784	784		25.126	1.6033	1	282770			25525	3478	17206	17216	29177	29177					0.12119723987984798
LAVAQRDH	8	Unmodified	_LAVAQRDH_					0	0	0		ENST00000586271.1_1_17:76120592-76121921:-|nuORF;nc|ENSG00000141524|Q7Z403-2|TMC6;ENST00000588087.5_1_17:76116732-76122925:-|nuORF;ENSG00000141524|ENST00000590602|TMC6;ENST00000589553.5_1_17:76120816-76124832:-|nuORF	ENST00000586271.1_1_17:76120592-76121921:-|nuORF	ENST00000586271.1_1_17:76120592-76121921:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	455.2464599609375	2	455.248683	908.482814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.957	1	52.957	52.457	53.457	0								0	0	0	0.29452	1	4372	4372		33.516	1.5607	1				25526	4509	17207	17217	29178	29178					0.024911498147503153
LAVARATYV	9	Unmodified	_LAVARATYV_					0	0	0			REV__nc|ENSG00000134762|Q14574-2|DSC3	REV__nc|ENSG00000134762|Q14574-2|DSC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.28485107421875	2	482.284734	962.554916	0.3695	0.0001782	-0.73992	-0.00035685	-0.37042	-0.00017865	482.2842372573064	51.076	0.82391	51.828	51.532	52.356	0.75174					56	19	4	0	0	0	0.18601	1	5104	5104		76.774	0	1	4451900	+		25527	19164	17208	17218	29179	29179					0.07214064168454115
LAVARRGVA	9	Unmodified	_LAVARRGVA_					0	0	0			REV__ENST00000473916.1_1_6:30891971-30893984:+|nuORF	REV__ENST00000473916.1_1_6:30891971-30893984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7912292480469	2	456.790518	911.566484	0.2225	0.00010163	4.1895	0.0019137	4.412	0.0020154	456.79228647464913	41.052	1.411	41.126	40.545	41.956	0.073418					84	43	2	0	0	0	0.72402	1	2706	2706		38.806	6.8513	1	319050	+		25528	27288	17209	17219	29180	29180					0.10716305982464291
LAVATLQP	8	Unmodified	_LAVATLQP_					0	0	0			REV__nc|ENSG00000186814|Q86W11-3|ZSCAN30	REV__nc|ENSG00000186814|Q86W11-3|ZSCAN30	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.256591796875	2	406.747453	811.480354	-1.2435	-0.00050579	4.3979	0.0017888	3.1544	0.001283	406.7492200071449	44.317	1.0958	45.162	44.736	45.832	0.84437					39	26	2	0	0	0	0.4196	1	4051	4051		21.96	3.6355	1	214460	+		25529	30111	17210	17220	29181	29181					0.06707301357084816
LAVAVIVK	8	Unmodified	_LAVAVIVK_					0	0	0		ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.785400390625	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.80706	1	1788	1788		19.36	0	1	1953100			25530	3846	17211	17221	29182	29182					0.13981055150509292
LAVAVIVK	8	Unmodified	_LAVAVIVK_					0	0	0		ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7850646972656	2	406.783839	811.553125	-0.45573	-0.00018539	4.0823	0.0016606	3.6266	0.0014752	406.7853476026277	33.431	0.94502	33.374	32.967	33.912	-0.056385					79	22	4	0	0	0	0.81548	1	2000	2000		20.482	0	1	606440			25531	3846	17211	17221	29183	29183					0.13981055150509292
LAVAVIVK	8	Unmodified	_LAVAVIVK_					0	0	0		ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852478027344	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.06	1	32.171	31.671	32.671	0.11117								0	0	0	0.29631	1	1492	1492		25.45	4.9683	1				25532	3846	17211	17221	29184	29184					0.13981055150509292
LAVAVIVK	8	Unmodified	_LAVAVIVK_					0	0	0		ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78533935546875	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.614	1	32.724	32.224	33.224	0.10991								0	0	0	0.29568	1	1538	1538		35.201	0	1				25533	3846	17211	17221	29185	29185					0.13981055150509292
LAVAVIVK	8	Unmodified	_LAVAVIVK_					0	0	0		ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853698730469	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.745	1	32.854	32.354	33.354	0.10991								0	0	0	0.29631	1	1550	1550		25.45	0	1				25534	3846	17211	17221	29186	29186					0.13981055150509292
LAVAVIVK	8	Unmodified	_LAVAVIVK_					0	0	0		ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7845764160156	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.82419	2	1311	1300;1311		25.45	4.9683	1	1286900			25535	3846	17211	17221	29187;29188	29188					0.13981055150509292
LAVAVIVK	8	Unmodified	_LAVAVIVK_					0	0	0		ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78533935546875	2	406.783839	811.553125	0.022938	9.3307E-06	3.6731	0.0014942	3.696	0.0015035	406.7851827724374	33.215	0.93484	33.182	32.78	33.715	-0.032677					97	42	3	0	0	0	0.86288	1	1553	1553		26.796	0	1	368720			25536	3846	17211	17221	29189	29189					0.13981055150509292
LAVAVIVK	8	Unmodified	_LAVAVIVK_					0	0	0		ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78515625	2	406.783839	811.553125	0.72345	0.00029429	2.8619	0.0011642	3.5854	0.0014585	406.7848598488789	32.675	0.80478	32.887	32.55	33.355	0.21168					52	18	3	0	0	0	0.81548	1	2294	2294		20.482	0	1	1157900			25537	3846	17211	17221	29190	29190					0.13981055150509292
LAVEGLKGQGV	11	Unmodified	_LAVEGLKGQGV_					0	0	0			REV__ENSG00000147912|ENST00000432825|FBXO10	REV__ENSG00000147912|ENST00000432825|FBXO10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.1654663085938	2	535.813856	1069.61316	-0.38772	-0.00020774	2.4082	0.0012903	2.0205	0.0010826	535.8150512488198	21.879	0.51993	21.25	21.013	21.533	-0.62835					22	12	3	0	0	0	0.17275	1	820	820		27.047	0	1	61037	+		25538	20091	17212	17222	29191	29191					0.08113701023103204
LAVEHTALA	9	Unmodified	_LAVEHTALA_					0	0	0		nc|ENSG00000183087|Q14393-5|GAS6;nc|ENSG00000183087|Q14393-4|GAS6;ENST00000480426.5_1_13:114523839-114535869:-|nuORF;ENST00000610073.1_1_13:114523839-114538639:-|nuORF;nc|ENSG00000183087|Q14393-3|GAS6;ENSG00000183087|ENST00000327773|GAS6;nc|ENSG00000183087|Q14393-1|GAS6;ENST00000608763.1_1_13:114524697-114525165:-|nuORF	nc|ENSG00000183087|Q14393-5|GAS6;ENST00000608763.1_1_13:114524697-114525165:-|nuORF	nc|ENSG00000183087|Q14393-5|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	462.7608337402344	2	462.761092	923.507631	0.2907	0.00013453	-0.51937	-0.00024035	-0.22867	-0.00010582	462.76073625243316	48.049	0.47787	48.087	47.85	48.328	0.037731					23	13	2	0	0	0	0.72402	1	3630	3630		38.806	1.647	1	137550			25539	7499;14477	17213	17223	29192	29192					0.04281784897455054
LAVEKPVL	8	Unmodified	_LAVEKPVL_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026;ENST00000540714.1_1_9:5919686-5933837:-|nuORF	ENSG00000183354|ENST00000399933|KIAA2026	ENSG00000183354|ENST00000399933|KIAA2026	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	2	434.778754	867.542954	0.048931	2.1274E-05	3.263	0.0014187	3.312	0.00144	434.780055906595	38.381	1.4097	38.353	37.994	39.403	-0.027843					122	32	4	0	0	0	0.87064	1	2551	2551		29.15	3.6994	1	2404700			25540	7527	17214	17224	29193	29193					0.10388447425293634
LAVEKPVL	8	Unmodified	_LAVEKPVL_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026;ENST00000540714.1_1_9:5919686-5933837:-|nuORF	ENSG00000183354|ENST00000399933|KIAA2026	ENSG00000183354|ENST00000399933|KIAA2026	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7795715332031	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.87922	1	3102	3102		31.955	0	1	2938700			25541	7527	17214	17224	29194	29194					0.10388447425293634
LAVELELKP	9	Unmodified	_LAVELELKP_					0	0	0		ENST00000446309.1_1_7:86780824-86781686:-|nuORF	ENST00000446309.1_1_7:86780824-86781686:-|nuORF	ENST00000446309.1_1_7:86780824-86781686:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3109130859375	2	506.307875	1010.6012	-0.4302	-0.00021782	2.8218	0.0014287	2.3916	0.0012109	506.3092413243001	54.85	1.3019	54.801	54.615	55.917	-0.049271					56	42	2	0	0	0	0.7932	1	4642	4642		24.203	0	1	188390			25542	11833	17215	17225	29195	29195					0.09632084279905939
LAVFFHTP	8	Unmodified	_LAVFFHTP_					0	0	0		ENST00000512400.1_1_4:675749-678780:-|nuORF;nc|ENSG00000169026|Q6UXD7-3|SLC49A3;ENSG00000169026|ENST00000322224|SLC49A3;nc|ENSG00000169026|Q6UXD7|SLC49A3	ENST00000512400.1_1_4:675749-678780:-|nuORF	ENST00000512400.1_1_4:675749-678780:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.25347900390625	2	466.255446	930.496338	-0.31362	-0.00014623	-2.9837	-0.0013912	-3.2973	-0.0015374	466.2538933485573	65.465	0.96945	65.43	64.524	65.494	-0.034798					62	36	2	0	0	0	0.92176	1	6246	6246		46.766	5.9883	1	189960			25543	6460	17216	17226	29196	29196					0.02831007593999857
LAVFPPQIKVK	11	Unmodified	_LAVFPPQIKVK_					0	0	0			REV__ENST00000592946.1_1_19:44611552-44611663:-|nuORF	REV__ENST00000592946.1_1_19:44611552-44611663:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.9324645996094	3	413.932303	1238.77508	-1.8356	-0.0007598	2.6354	0.0010909	0.79983	0.00033108	413.93335322974514	43.048	2.0933	43.048	42.061	44.154	0					130	51	3	0	0	0	0.70584	1	3062	3062		30.569	7.191	1	494810	+		25544	29223	17217	17227	29197	29197					0.16524289776043588
LAVFRFKVLIL	11	Unmodified	_LAVFRFKVLIL_					0	0	0		ENST00000471550.1_1_7:38247105-38254853:+|nuORF;nc|ENSG00000010270|O95772-2|STARD3NL;ENSG00000010270|ENST00000009041|STARD3NL	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.625732421875	3	440.291831	1317.85366	-0.14762	-6.4996E-05	1.4032	0.0006178	1.2555	0.0005528	440.29224154688933	58.12	1.3783	58.106	57.522	58.9	-0.013641					131	47	4	0	0	0	0.78683	1	5239	5239		14.086	3.4992	1	235220			25545	763	17218	17228	29198	29198					0.20745142081136692
LAVFRFKVLIL	11	Unmodified	_LAVFRFKVLIL_					0	0	0		ENST00000471550.1_1_7:38247105-38254853:+|nuORF;nc|ENSG00000010270|O95772-2|STARD3NL;ENSG00000010270|ENST00000009041|STARD3NL	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2918701171875	3	440.291831	1317.85366	-0.15857	-6.9816E-05	1.3554	0.00059675	1.1968	0.00052694	440.29230392434306	60	1.3371	59.986	59.393	60.73	-0.013729					87	33	3	0	0	0	0.78391	1	5512	5512		14.694	1.1857	1	214570			25546	763	17218	17228	29199	29199					0.20745142081136692
LAVFRFKVLIL	11	Unmodified	_LAVFRFKVLIL_					0	0	0		ENST00000471550.1_1_7:38247105-38254853:+|nuORF;nc|ENSG00000010270|O95772-2|STARD3NL;ENSG00000010270|ENST00000009041|STARD3NL	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2926330566406	3	440.291831	1317.85366	0.11104	4.8888E-05	0.98199	0.00043236	1.093	0.00048125	440.292096446833	59.907	1.2583	59.875	59.267	60.525	-0.031731					73	31	3	0	0	0	0.80593	1	5614	5614		10.104	2.2994	1	247630			25547	763	17218	17228	29200	29200					0.20745142081136692
LAVFRFKVLIL	11	Unmodified	_LAVFRFKVLIL_					0	0	0		ENST00000471550.1_1_7:38247105-38254853:+|nuORF;nc|ENSG00000010270|O95772-2|STARD3NL;ENSG00000010270|ENST00000009041|STARD3NL	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.2918395996094	3	440.291831	1317.85366	0.12494	5.5008E-05	1.0292	0.00045317	1.1542	0.00050818	440.29209490830686	59.759	1.3614	59.791	59.261	60.623	0.032825					81	34	3	0	0	0	0.73621	1	5539	5539		25.126	12.169	1	212730			25548	763	17218	17228	29201	29201					0.20745142081136692
LAVFRFKVLIL	11	Unmodified	_LAVFRFKVLIL_					0	0	0		ENST00000471550.1_1_7:38247105-38254853:+|nuORF;nc|ENSG00000010270|O95772-2|STARD3NL;ENSG00000010270|ENST00000009041|STARD3NL	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2923889160156	3	440.291831	1317.85366	-1.5024	-0.00066148	2.5815	0.0011366	1.0791	0.00047512	440.2927341441064	57.947	0.93653	58.027	57.61	58.546	0.079643					126	42	4	0	0	0	0.80593	1	4903	4903		10.104	0.45776	1	432770			25549	763	17218	17228	29202	29202					0.20745142081136692
LAVFRFKVLIL	11	Unmodified	_LAVFRFKVLIL_					0	0	0		ENST00000471550.1_1_7:38247105-38254853:+|nuORF;nc|ENSG00000010270|O95772-2|STARD3NL;ENSG00000010270|ENST00000009041|STARD3NL	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.62646484375	3	440.291831	1317.85366	-1.4987	-0.00065986	2.7845	0.001226	1.2858	0.00056611	440.29287290347224	59.592	1.1212	59.686	59.191	60.312	0.094063					94	32	4	0	0	0	0.78683	2	5154	5101;5154		14.086	0.57807	1	285330			25550	763	17218	17228	29203;29204	29204					0.20745142081136692
LAVFRFKVLIL	11	Unmodified	_LAVFRFKVLIL_					0	0	0		ENST00000471550.1_1_7:38247105-38254853:+|nuORF;nc|ENSG00000010270|O95772-2|STARD3NL;ENSG00000010270|ENST00000009041|STARD3NL	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2924499511719	3	440.291831	1317.85366	0.37062	0.00016318	0.89378	0.00039353	1.2644	0.00055671	440.29198732058745	59.638	1.194	59.752	59.25	60.444	0.11396					105	36	4	0	0	0	0.74022	2	5100	5100;5153		24.232	10.146	1	260900			25551	763	17218	17228	29205;29206	29205					0.20745142081136692
LAVFRFKVLIL	11	Unmodified	_LAVFRFKVLIL_					0	0	0		ENST00000471550.1_1_7:38247105-38254853:+|nuORF;nc|ENSG00000010270|O95772-2|STARD3NL;ENSG00000010270|ENST00000009041|STARD3NL	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2922058105469	3	440.291831	1317.85366	-0.80694	-0.00035529	1.916	0.00084358	1.109	0.00048829	440.2925892319023	59.813	1.0781	59.814	59.336	60.414	0.00051117					87	33	3	0	0	0	0.76251	1	5127	5127		19.263	1.4295	1	264470			25552	763	17218	17228	29207	29207					0.20745142081136692
LAVFVQTSF	9	Unmodified	_LAVFVQTSF_					0	0	0			REV__ENST00000247295.4_1_9:134133967-134134456:-|nuORF	REV__ENST00000247295.4_1_9:134133967-134134456:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.2916259765625	2	506.279118	1010.54368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.675	1	52.672	52.172	53.172	-0.0033035								0	0	0	0.30778	1	4568	4568		27.882	1.1893	1		+		25553	24266	17219	17229	29208	29208					0.038832420743460716
LAVGAVPVV	9	Unmodified	_LAVGAVPVV_					0	0	0		ENST00000556552.1_1_14:94594803-94595124:-|nuORF;ENSG00000119632|ENST00000238609|IFI27L2	ENST00000556552.1_1_14:94594803-94595124:-|nuORF	ENST00000556552.1_1_14:94594803-94595124:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.76690673828125	2	412.765646	823.516739	-1.8859	-0.00077844	3.9578	0.0016337	2.0719	0.00085522	412.7678129581843	48.855	3.3742	48.881	47.541	50.915	0.025574					176	94	2	0	0	0	0.7932	1	3718	3718		21.702	1.2205	1	621000			25554	3080	17220	17230	29209	29209					0.09792178253815109
LAVGNIKP	8	Unmodified	_LAVGNIKP_					0	0	0		ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2572021484375	2	406.255446	810.496338	0.016868	6.8526E-06	3.7223	0.0015122	3.7391	0.001519	406.25685626914105	33.24	0.97973	33.208	32.974	33.953	-0.032677					91	43	3	0	0	0	0.80706	1	1621	1621		19.36	4.6959	1	414640			25555	7849	17221	17231	29210	29210					0.08351007593989834
LAVGNVELL	9	Unmodified	_LAVGNVELL_					0	0	0			REV__ENSG00000180900|ENST00000356994|SCRIB	REV__ENSG00000180900|ENST00000356994|SCRIB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2787170410156	2	464.279118	926.543683	-1.1177	-0.00051891	1.8482	0.0008581	0.73057	0.00033919	464.2799779613732	51.335	0.81553	51.369	50.998	51.813	0.034584					33	23	2	0	0	0	0.39977	1	4087	4087		57.811	1.0902	1	143670	+		25556	22423	17222	17232	29211	29211					0.07747242074333371
LAVGPAQLQA	10	Unmodified	_LAVGPAQLQA_					0	0	0		ENST00000398022.6_1_20:30753698-30754259:+|nuORF	ENST00000398022.6_1_20:30753698-30754259:+|nuORF	ENST00000398022.6_1_20:30753698-30754259:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.9293212890625	2	484.282192	966.549831	-1.1521	-0.00055795	1.3242	0.00064128	0.17206	8.3324E-05	484.282742791307	27.079	0.67356	27.052	26.701	27.375	-0.027706					26	17	2	0	0	0	0.37624	1	1179	1179		24.203	0	1	32137			25557	11169	17223	17233	29212	29212					0.06521760305849966
LAVGRWVPVRR	11	Unmodified	_LAVGRWVPVRR_					0	0	0		ENST00000358344.7_1_5:177631560-177631635:+|nuORF	ENST00000358344.7_1_5:177631560-177631635:+|nuORF	ENST00000358344.7_1_5:177631560-177631635:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2740478515625	3	436.938562	1307.79386	1.2427	0.00054299	1.3275	0.00058005	2.5703	0.001123	436.9390015295864	46.658	1.2437	46.654	46.284	47.528	-0.0041618					96	31	4	0	0	0	0.74022	1	3850	3850		24.232	1.6702	1	651950			25558	10408	17224	17234	29213	29213					0.15227264190434653
LAVGRWVPVRR	11	Unmodified	_LAVGRWVPVRR_					0	0	0		ENST00000358344.7_1_5:177631560-177631635:+|nuORF	ENST00000358344.7_1_5:177631560-177631635:+|nuORF	ENST00000358344.7_1_5:177631560-177631635:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2740783691406	3	436.938562	1307.79386	0.24889	0.00010875	2.5705	0.0011231	2.8194	0.0012319	436.9395594339826	46.446	1.4419	46.484	46.059	47.501	0.038185					107	39	4	0	0	0	0.73621	2	3390	3390;3428		25.126	4.2888	1	827010			25559	10408	17224	17234	29214;29215	29214					0.15227264190434653
LAVGRWVPVRR	11	Unmodified	_LAVGRWVPVRR_					0	0	0		ENST00000358344.7_1_5:177631560-177631635:+|nuORF	ENST00000358344.7_1_5:177631560-177631635:+|nuORF	ENST00000358344.7_1_5:177631560-177631635:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.9399719238281	3	436.938562	1307.79386	-0.36541	-0.00015966	2.909	0.0012711	2.5436	0.0011114	436.93986861575377	52.649	0.95123	53.072	52.681	53.632	0.42348					63	22	4	0	0	0	0.74022	1	5324	5324		24.232	4.6049	1	826520			25560	10408	17224	17234	29216	29216					0.15227264190434653
LAVGRWVPVRR	11	Unmodified	_LAVGRWVPVRR_					0	0	0		ENST00000358344.7_1_5:177631560-177631635:+|nuORF	ENST00000358344.7_1_5:177631560-177631635:+|nuORF	ENST00000358344.7_1_5:177631560-177631635:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.9395751953125	3	436.938562	1307.79386	0.28446	0.00012429	2.2669	0.00099051	2.5514	0.0011148	436.9395498414308	52.325	1.2402	52.993	52.715	53.955	0.66729					61	29	3	0	0	0	0.76251	1	5289	5289		19.263	0.73163	1	777610			25561	10408	17224	17234	29217	29217					0.15227264190434653
LAVGVAVPIL	10	Unmodified	_LAVGVAVPIL_					0	0	0			REV__nc|ENSG00000005893|P13473-3|LAMP2	REV__nc|ENSG00000005893|P13473-3|LAMP2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.3174133300781	2	476.315503	950.616454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.395	1	39.395	38.895	39.895	0								0	0	0	0.45132	1	2516	2516		19.36	6.4008	1		+		25562	29668	17225	17235	29218	29218					0.13916995867759852
LAVHGAGALE	10	Unmodified	_LAVHGAGALE_					0	0	0			REV__ENST00000450849.6_2_19:3880796-3880904:+|nuORF	REV__ENST00000450849.6_2_19:3880796-3880904:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	469.25885009765625	2	469.258717	936.50288	-0.28783	-0.00013506	0.62934	0.00029532	0.34151	0.00016026	469.25892183391403	25.64	0.64706	25.599	25.332	25.979	-0.04117					41	17	3	0	0	0	0.86305	1	1097	1097		31.955	0	1	153890	+		25563	26876	17226	17236	29219	29219					0.032089007547028814
LAVHLPDAK	9	Unmodified	_LAVHLPDAK_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.28509521484375	2	482.284734	962.554916	0.3695	0.0001782	-0.73992	-0.00035685	-0.37042	-0.00017865	482.2842372573064	51.076	0.82391	51.828	51.532	52.356	0.75174					56	19	4	0	0	0	0.053315	2	5077	5077;5090		106.42	1.1464	1	4451900	+		25564	20085	17227	17237	29220;29221	29220					0.07214064168454115
LAVHPSGVAL	10	Unmodified	_LAVHPSGVAL_					0	0	0		ENSG00000187608|ENST00000649529|ISG15	ENSG00000187608|ENST00000649529|ISG15	ENSG00000187608|ENST00000649529|ISG15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.2843322753906	2	482.284734	962.554916	0.4196	0.00020237	-0.77961	-0.00037599	-0.36001	-0.00017363	482.2842183743908	51.297	1.1265	51.732	51.326	52.452	0.43505					65	26	4	0	0	0	0.020748	2	5093	5069;5093		120.62	15.874	1	3842600			25565	7864	17228	17238	29222;29223	29223					0.07214064168476853
LAVHPSGVAL	10	Unmodified	_LAVHPSGVAL_					0	0	0		ENSG00000187608|ENST00000649529|ISG15	ENSG00000187608|ENST00000649529|ISG15	ENSG00000187608|ENST00000649529|ISG15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.2845764160156	2	482.284734	962.554916	0.3695	0.0001782	-0.73992	-0.00035685	-0.37042	-0.00017865	482.2842372573064	51.076	0.82391	51.828	51.532	52.356	0.75174					56	19	4	0	0	0	0.19278	1	5065	5065		87.754	0	1	4451900			25566	7864	17228	17238	29224	29224					0.07214064168476853
LAVIAPSPTMG	11	Unmodified	_LAVIAPSPTMG_					0	0	0			REV__ENST00000465437.5_1_22:31904270-31924785:+|nuORF	REV__ENST00000465437.5_1_22:31904270-31924785:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.2905883789062	2	528.791535	1055.56852	2.3499	0.0012426	2.0901	0.0011052	4.44	0.0023478	528.7922318690141	104.26	0.47398	104.45	104.15	104.63	0.18888					16	10	2	0	0	0	0.17454	1	12686	12686		21.96	0	1	79286	+		25567	27108	17229	17239	29225	29225					0.04295553885413028
LAVIARNL	8	Unmodified	_LAVIARNL_					0	0	0		nc|ENSG00000145439|Q8N4T8-2|CBR4;ENSG00000145439|ENST00000306193|CBR4	nc|ENSG00000145439|Q8N4T8-2|CBR4	nc|ENSG00000145439|Q8N4T8-2|CBR4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77984619140625	2	435.281995	868.549437	-1.4045	-0.00061133	0.61457	0.00026751	-0.78989	-0.00034382	435.28220064654676	39.92	1.4192	40.288	39.091	40.511	0.36797					92	33	3	0	0	0	0.4196	1	3291	3291		33.516	0	1	1034700			25568	4772	17230	17240	29226	29226					0.10990385376669565
LAVIAVVVQ	9	Unmodified	_LAVIAVVVQ_					0	0	0		ENSG00000168135|ENST00000303592|KCNJ4	ENSG00000168135|ENST00000303592|KCNJ4	ENSG00000168135|ENST00000303592|KCNJ4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.29925537109375	2	456.299853	910.585153	-1.6896	-0.00077098	4.4336	0.0020231	2.744	0.0012521	456.30174360814857	51.937	1.2506	51.937	51.624	52.874	0					54	32	2	0	0	0	0.7932	1	4213	4213		26.796	0	1	89537			25569	6375	17231	17241	29227	29227					0.1262842283366581
LAVIKVEP	8	Unmodified	_LAVIKVEP_					0	0	0		nc|ENSG00000290649|Q8NH63|OR51H1	nc|ENSG00000290649|Q8NH63|OR51H1	nc|ENSG00000290649|Q8NH63|OR51H1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.2921142578125	2	434.778754	867.542954	1.3051	0.00056743	1.5808	0.0006873	2.8859	0.0012547	434.77952069520137	74.02	0.94962	74.064	73.788	74.737	0.043648					58	37	2	0	0	0	0.4196	1	7151	7151		31.955	5.1588	1	108540			25570	15340	17232	17242	29228	29228					0.10388447425282266
LAVIKVEP	8	Unmodified	_LAVIKVEP_					0	0	0		nc|ENSG00000290649|Q8NH63|OR51H1	nc|ENSG00000290649|Q8NH63|OR51H1	nc|ENSG00000290649|Q8NH63|OR51H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7768249511719	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.89962	1	1913	1913		38.806	5.2906	1	2158200			25571	15340	17232	17242	29229	29229					0.10388447425282266
LAVIKVEP	8	Unmodified	_LAVIKVEP_					0	0	0		nc|ENSG00000290649|Q8NH63|OR51H1	nc|ENSG00000290649|Q8NH63|OR51H1	nc|ENSG00000290649|Q8NH63|OR51H1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	434.778754	867.542954	-1.3446	-0.0005846	4.9109	0.0021351	3.5663	0.0015505	434.78071605971826	74.309	0.4716	74.395	74.251	74.723	0.085907	0.21672	0.0019627	NaN	31.955	34	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78237			25572	15340	17232	17242							0.10388447425282266
LAVKRLEKQ	9	Unmodified	_LAVKRLEKQ_					0	0	0		ENSG00000058453|ENST00000375541|CROCC;ENST00000466256.6_1_1:17257024-17267483:+|nuORF	ENSG00000058453|ENST00000375541|CROCC	ENSG00000058453|ENST00000375541|CROCC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.8457641601562	2	542.84549	1083.67643	0.98977	0.00053729	-1.2331	-0.00066936	-0.24329	-0.00013207	542.8446154777146	23.789	0.42062	23.215	23.052	23.472	-0.57415					14	9	2	0	0	0	0.69624	1	1116	1116		40.778	7.9657	1	90162			25573	1044	17233	17243	29230	29230					0.1379368653099391
LAVKRLEKQ	9	Unmodified	_LAVKRLEKQ_					0	0	0		ENSG00000058453|ENST00000375541|CROCC;ENST00000466256.6_1_1:17257024-17267483:+|nuORF	ENSG00000058453|ENST00000375541|CROCC	ENSG00000058453|ENST00000375541|CROCC	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	542.84549	1083.67643	0.0096861	5.2581E-06	-1.0083	-0.00054733	-0.99857	-0.00054207	542.8450770458129	23.92	0.46713	23.539	23.327	23.794	-0.38178	0.16193	0.0001406	NaN	40.778	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72878			25574	1044	17233	17243							0.1379368653099391
LAVLALQLARQ	11	Unmodified	_LAVLALQLARQ_					0	0	0		ENSG00000081791|ENST00000432126|DELE1	ENSG00000081791|ENST00000432126|DELE1	ENSG00000081791|ENST00000432126|DELE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.8832397460938	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.72228	1	2696	2696		27.882	3.6795	1	352020			25575	1468	17234	17244	29231	29231					0.15525931110846614
LAVLAVGPV	9	Unmodified	_LAVLAVGPV_					0	0	0		ENST00000252032.9_1_20:3232633-3232870:-|nuORF	ENST00000252032.9_1_20:3232633-3232870:-|nuORF	ENST00000252032.9_1_20:3232633-3232870:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.77520751953125	2	419.773471	837.53239	2.3381	0.00098146	1.778	0.00074638	4.1161	0.0017278	419.7741058046687	48.711	0.86761	48.711	48.232	49.1	0.00016785					34	19	2	0	0	0	0.72098	1	4057	4057		39.021	0	1	78928			25576	9305	17235	17245	29232	29232					0.10712464770858787
LAVLAVGPV	9	Unmodified	_LAVLAVGPV_					0	0	0		ENST00000252032.9_1_20:3232633-3232870:-|nuORF	ENST00000252032.9_1_20:3232633-3232870:-|nuORF	ENST00000252032.9_1_20:3232633-3232870:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	419.773471	837.53239	-1.7543	-0.00073639	5.2118	0.0021878	3.4575	0.0014514	419.77546882986286	48.718	1.5894	48.718	47.982	49.572	0	0.028903	0.00080886	NaN	39.021	56	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96095			25577	9305	17235	17245							0.10712464770858787
LAVLAVGPV	9	Unmodified	_LAVLAVGPV_					0	0	0		ENST00000252032.9_1_20:3232633-3232870:-|nuORF	ENST00000252032.9_1_20:3232633-3232870:-|nuORF	ENST00000252032.9_1_20:3232633-3232870:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	419.773471	837.53239	-1.8528	-0.00077775	5.8191	0.0024427	3.9663	0.001665	419.7757674336923	48.646	1.2969	48.669	48.111	49.408	0.02227	-0.020487	0.0013188	NaN	39.021	56	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76814			25578	9305	17235	17245							0.10712464770858787
LAVLCEKTLH	10	Unmodified	_LAVLCEKTLH_					0	0	0			REV__ENST00000477078.2_1_10:106037658-106045722:+|nuORF	REV__ENST00000477078.2_1_10:106037658-106045722:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	563.3240966796875	2	563.818084	1125.62162	-0.25081	-0.00014141	-0.24743	-0.00013951	-0.49824	-0.00028092	563.8170061947588	55.275	1.2619	55.238	54.668	55.929	-0.036827					46	40	2	0	0	0	0.82886	1	4683	4683		37.812	1.3648	1	166930	+		25579	16508	17236	17246	29233	29233					0.0638293166805397
LAVLDVLGL	9	Unmodified	_LAVLDVLGL_					0	0	0		ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7930603027344	2	456.791861	911.569169	-0.85953	-0.00039263	3.5719	0.0016316	2.7123	0.001239	456.7934335420697	36.323	3.5767	36.267	33.824	37.401	-0.055901					213	80	5	0	0	0	0.72402	2	2506	2506;2532		38.806	6.5047	1	4833100			25580	7970	17237	17247	29234;29235	29234					0.10984716596760791
LAVLEKPV	8	Unmodified	_LAVLEKPV_					0	0	0			REV__ENST00000553041.5_1_12:96414526-96429297:-|nuORF	REV__ENST00000553041.5_1_12:96414526-96429297:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7795715332031	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.81548	1	3613	3613		20.482	0	1	1959200	+		25581	17850	17238	17248	29236	29236					0.10388447425293634
LAVLGETLIP	10	Unmodified	_LAVLGETLIP_					0	0	0		nc|ENSG00000204267|Q03519-2|TAP2;ENSG00000204267|ENST00000374897|TAP2	nc|ENSG00000204267|Q03519-2|TAP2	nc|ENSG00000204267|Q03519-2|TAP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3184814453125	2	513.3157	1024.61685	-1.338	-0.00068682	3.7943	0.0019477	2.4563	0.0012608	513.317527909064	55.758	0.98328	55.758	55.175	56.159	0					47	26	3	0	0	0	0.85694	1	4765	4765		21.96	4.5949	1	140760			25582	8426	17239	17249	29237	29237					0.10552370796949617
LAVLGIVGP	9	Unmodified	_LAVLGIVGP_					0	0	0			REV__ENST00000497856.6_1_5:112228472-112256990:-|nuORF	REV__ENST00000497856.6_1_5:112228472-112256990:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7749328613281	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.55559	1	3705	3705		49.211	0	1	184570000	+		25583	27777	17240	17250	29238	29238					0.10712464770847419
LAVLGKLV	8	Unmodified	_LAVLGKLV_					0	0	0			REV__ENSG00000196950|ENST00000359634|SLC39A10	REV__ENSG00000196950|ENST00000359634|SLC39A10	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78509521484375	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.956	1	31.068	30.568	31.568	0.11198								0	0	0	0.31173	1	1396	1396		8.8223	0	1		+		25584	23184	17241	17251	29239	29239					0.1398105515052066
LAVLKELTPL	10	Unmodified	_LAVLKELTPL_					0	0	0			REV__nc|ENSG00000170820|P23945-3|FSHR	REV__nc|ENSG00000170820|P23945-3|FSHR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.8502197265625	2	548.85245	1095.69035	-2.6526	-0.0014559	2.9042	0.001594	0.25159	0.00013809	548.8539163476257	40.504	1.0376	40.896	40.377	41.415	0.39209					80	28	4	0	0	0	0.80179	3	3447	3447;3458;3485		39.253	6.2903	1	6533500	+		25585	21689	17242	17252	29240;29241;29242	29240					0.14632919239420517
LAVLLGKTP	9	Unmodified	_LAVLLGKTP_					0	0	0		nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	nc|ENSG00000143569|Q14157-4|UBAP2L	nc|ENSG00000143569|Q14157-4|UBAP2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.30126953125	2	456.299853	910.585153	-0.40408	-0.00018438	3.3963	0.0015497	2.9922	0.0013653	456.3012719086531	32.915	1.5209	33.085	32.546	34.067	0.16971					108	35	4	0	0	0	0.77546	1	2335	2335		31.955	3.7006	1	2612400			25586	4646	17243	17253	29243	29243					0.1262842283365444
LAVLLLDLLL	10	Unmodified	_LAVLLLDLLL_					0	0	0			REV__ENSG00000205808|ENST00000381883|PLPP6	REV__ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3742065429688	2	548.373018	1094.73148	-1.4258	-0.00078185	3.8141	0.0020915	2.3883	0.0013097	548.3749403834641	37.356	2.5025	37.356	35.98	38.483	0					111	59	3	0	0	0	0.86452	1	2220	2220		30.504	5.0535	1	203100	+		25587	23577	17244	17254	29244	29244					0.18790680278902983
LAVLLLDLLL	10	Unmodified	_LAVLLLDLLL_					0	0	0			REV__ENSG00000205808|ENST00000381883|PLPP6	REV__ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3740234375	2	548.373018	1094.73148	-0.47019	-0.00025784	2.7651	0.0015163	2.2949	0.0012584	548.3743331690392	35.442	1.0652	35.43	35	36.065	-0.012203					66	23	4	0	0	0	0.86589	1	2195	2195		29.15	7.1897	1	555000	+		25588	23577	17244	17254	29245	29245					0.18790680278902983
LAVLLLDLLL	10	Unmodified	_LAVLLLDLLL_					0	0	0			REV__ENSG00000205808|ENST00000381883|PLPP6	REV__ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3734130859375	2	548.373018	1094.73148	-0.40061	-0.00021968	2.6599	0.0014586	2.2593	0.001239	548.374255411481	36.732	0.62341	36.714	36.286	36.91	-0.018677					36	13	4	0	0	0	0.8488	2	2356	2356;2369		17.365	1.7232	1	310410	+		25589	23577	17244	17254	29246;29247	29246					0.18790680278902983
LAVLLLDLLL	10	Unmodified	_LAVLLLDLLL_					0	0	0			REV__ENSG00000205808|ENST00000381883|PLPP6	REV__ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3742065429688	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.85939	1	2465	2465		23.042	4.7181	1	314410	+		25590	23577	17244	17254	29248	29248					0.18790680278902983
LAVLLLDLLL	10	Unmodified	_LAVLLLDLLL_					0	0	0			REV__ENSG00000205808|ENST00000381883|PLPP6	REV__ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3738403320312	2	548.373018	1094.73148	-0.014191	-7.7821E-06	2.2319	0.0012239	2.2178	0.0012162	548.374000997207	35.509	1.288	35.453	35.002	36.29	-0.055901					73	28	3	0	0	0	0.85438	1	2271	2271		16.473	3.514	1	330260	+		25591	23577	17244	17254	29249	29249					0.18790680278902983
LAVLLLDLLL	10	Unmodified	_LAVLLLDLLL_					0	0	0			REV__ENSG00000205808|ENST00000381883|PLPP6	REV__ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3738403320312	2	548.373018	1094.73148	-0.93576	-0.00051314	3.3649	0.0018452	2.4292	0.0013321	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.8488	1	2420	2420		17.365	0.89182	1	651720	+		25592	23577	17244	17254	29250	29250					0.18790680278902983
LAVLLLDLLL	10	Unmodified	_LAVLLLDLLL_					0	0	0			REV__ENSG00000205808|ENST00000381883|PLPP6	REV__ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.3739013671875	2	548.373018	1094.73148	0.10207	5.5971E-05	2.4087	0.0013209	2.5108	0.0013769	548.3742221063811	37.296	1.0877	37.32	36.95	38.037	0.023621					64	31	3	0	0	0	0.85438	2	2125	2125;2178		16.473	0.83134	1	318790	+		25593	23577	17244	17254	29251;29252	29251					0.18790680278902983
LAVLLPKE	8	Unmodified	_LAVLLPKE_					0	0	0		nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;ENSG00000134668|ENST00000360482|SPOCD1;nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7879333496094	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.92457	1	2862	2862		47.916	3.3845	1	11085000			25594	3950	17245	17255	29253	29253					0.11308733942325944
LAVLLPKE	8	Unmodified	_LAVLLPKE_					0	0	0		nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;ENSG00000134668|ENST00000360482|SPOCD1;nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7867736816406	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.82464	4	3019	3019;3077;3089;3251		54.765	7.7681	1	12523000			25595	3950	17245	17255	29254;29255;29256;29257	29254					0.11308733942325944
LAVLLPKE	8	Unmodified	_LAVLLPKE_					0	0	0		nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;ENSG00000134668|ENST00000360482|SPOCD1;nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.78778076171875	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.9159	1	2762	2762		44.531	9.3304	1	10128000			25596	3950	17245	17255	29258	29258					0.11308733942325944
LAVLLPKE	8	Unmodified	_LAVLLPKE_					0	0	0		nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;ENSG00000134668|ENST00000360482|SPOCD1;nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.787841796875	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.86288	1	2507	2507		26.796	1.3459	1	11532000			25597	3950	17245	17255	29259	29259					0.11308733942325944
LAVLLPKE	8	Unmodified	_LAVLLPKE_					0	0	0		nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;ENSG00000134668|ENST00000360482|SPOCD1;nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78790283203125	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.79972	3	2743	2697;2709;2743		62.978	10.234	1	9571700			25598	3950	17245	17255	29260;29261;29262	29262					0.11308733942325944
LAVLLPKE	8	Unmodified	_LAVLLPKE_					0	0	0		nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;ENSG00000134668|ENST00000360482|SPOCD1;nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7879638671875	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.82464	1	2502	2502		21.702	0	1	12467000			25599	3950	17245	17255	29263	29263					0.11308733942325944
LAVLLPKE	8	Unmodified	_LAVLLPKE_					0	0	0		nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;ENSG00000134668|ENST00000360482|SPOCD1;nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7880554199219	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.9159	2	2768	2721;2768		52.299	2.2746	1	10215000			25600	3950	17245	17255	29264;29265	29265					0.11308733942325944
LAVLLPVLLT	10	Unmodified	_LAVLLPVLLT_					0	0	0			REV__ENSG00000108823|ENST00000262018|SGCA	REV__ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3612670898438	2	526.359911	1050.70527	0.086645	4.5607E-05	2.1771	0.0011459	2.2637	0.0011915	526.3609236587663	33.368	2.0596	33.371	32.762	34.822	0.0030785					171	48	5	0	0	0	0.86482	1	1961	1961		25.45	1.2474	1	3096800	+		25601	17733	17246	17256	29266	29266					0.1819441110740172
LAVLLPVLLT	10	Unmodified	_LAVLLPVLLT_					0	0	0			REV__ENSG00000108823|ENST00000262018|SGCA	REV__ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.361083984375	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.8488	1	1823	1823		17.365	0	1	1221500	+		25602	17733	17246	17256	29267	29267					0.1819441110740172
LAVLLQAAE	9	Unmodified	_LAVLLQAAE_					0	0	0		ENSG00000174132|ENST00000312637|FAM174A	ENSG00000174132|ENST00000312637|FAM174A	ENSG00000174132|ENST00000312637|FAM174A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.28009033203125	2	464.279118	926.543683	0.32303	0.00014997	0.058601	2.7207E-05	0.38163	0.00017718	464.2791736750263	51.466	0.7576	51.526	51.064	51.822	0.059719					32	20	2	0	0	0	0.22631	1	4097	4097		71.296	1.6681	1	169530			25603	6910	17247	17257	29268	29268					0.07747242074322003
LAVLLQAAE	9	Unmodified	_LAVLLQAAE_					0	0	0		ENSG00000174132|ENST00000312637|FAM174A	ENSG00000174132|ENST00000312637|FAM174A	ENSG00000174132|ENST00000312637|FAM174A	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	464.279118	926.543683	-1.1177	-0.00051891	1.8482	0.0008581	0.73057	0.00033919	464.2799779613732	51.335	0.81553	51.369	50.998	51.813	0.034584	-0.042112	0.0010628	NaN	71.296	33	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143670			25604	6910	17247	17257							0.07747242074322003
LAVLLQAAE	9	Unmodified	_LAVLLQAAE_					0	0	0		ENSG00000174132|ENST00000312637|FAM174A	ENSG00000174132|ENST00000312637|FAM174A	ENSG00000174132|ENST00000312637|FAM174A	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	464.279118	926.543683	-0.4312	-0.0002002	0.8974	0.00041664	0.4662	0.00021645	464.27927604960144	51.423	0.73845	51.339	50.935	51.674	-0.084534	-0.072704	0.00017985	NaN	71.296	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128270			25605	6910	17247	17257							0.07747242074322003
LAVLLQLVDM	10	Unmodified	_LAVLLQLVDM_					0	0	0			REV__nc|ENSG00000198589|P50851-2|LRBA	REV__nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.8300170898438	2	557.83066	1113.64677	0.35884	0.00020017	-0.071573	-3.9926E-05	0.28727	0.00016025	557.8305500141807	100.81	1.6091	101.01	100.54	102.15	0.2058					76	38	3	0	0	0	0.85466	1	10571	10571		20.947	0.4651	1	1006700	+		25606	23342	17248	17258	29269	29269					0.09448986470647469
LAVLLRKG	8	Unmodified	_LAVLLRKG_					0	0	0		ENST00000566735.1_1_16:19125342-19127388:+|nuORF;ENSG00000205730|ENST00000381440|ITPRIPL2	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.30023193359375	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.80706	5	6779	6779;6820;6836;6843;6868		26.796	5.0938	1	1072400			25607	8538	17249	17259	29270;29271;29272;29273;29274	29270					0.14627262273370434
LAVLLRKG	8	Unmodified	_LAVLLRKG_					0	0	0		ENST00000566735.1_1_16:19125342-19127388:+|nuORF;ENSG00000205730|ENST00000381440|ITPRIPL2	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3003845214844	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.86294	1	7100	7100		8.8223	0	1	1702600			25608	8538	17249	17259	29275	29275					0.14627262273370434
LAVLLRKG	8	Unmodified	_LAVLLRKG_					0	0	0		ENST00000566735.1_1_16:19125342-19127388:+|nuORF;ENSG00000205730|ENST00000381440|ITPRIPL2	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2998962402344	2	435.300188	868.585822	-0.33292	-0.00014492	0.65367	0.00028454	0.32075	0.00013962	435.30030600334584	75.563	1.7203	75.517	74.991	76.711	-0.045975					102	48	3	0	0	0	0.80706	2	7425	7394;7425		21.702	5.5846	1	492420			25609	8538	17249	17259	29276;29277	29277					0.14627262273370434
LAVLLRKG	8	Unmodified	_LAVLLRKG_					0	0	0		ENST00000566735.1_1_16:19125342-19127388:+|nuORF;ENSG00000205730|ENST00000381440|ITPRIPL2	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.29949951171875	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.80706	5	7392	7325;7333;7351;7376;7392		21.702	7.0382	1	1921500			25610	8538	17249	17259	29278;29279;29280;29281;29282	29282					0.14627262273370434
LAVLLRKG	8	Unmodified	_LAVLLRKG_					0	0	0		ENST00000566735.1_1_16:19125342-19127388:+|nuORF;ENSG00000205730|ENST00000381440|ITPRIPL2	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3000793457031	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.81548	3	7031	6999;7031;7073		35.201	6.9464	1	2081500			25611	8538	17249	17259	29283;29284;29285	29284					0.14627262273370434
LAVLLRKG	8	Unmodified	_LAVLLRKG_					0	0	0		ENST00000566735.1_1_16:19125342-19127388:+|nuORF;ENSG00000205730|ENST00000381440|ITPRIPL2	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3000183105469	2	435.300188	868.585822	-1.3785	-0.00060007	1.5278	0.00066505	0.14927	6.4979E-05	435.30073733409733	75.396	1.3729	75.483	74.943	76.316	0.087639					63	36	2	0	0	0	0.80706	4	7009	6987;6998;7009;7021		35.201	6.9464	1	527430			25612	8538	17249	17259	29286;29287;29288;29289	29288					0.14627262273370434
LAVLLRKG	8	Unmodified	_LAVLLRKG_					0	0	0		ENST00000566735.1_1_16:19125342-19127388:+|nuORF;ENSG00000205730|ENST00000381440|ITPRIPL2	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2999267578125	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82419	3	7583	7583;7677;7712		13.775	0	1	5485100			25613	8538	17249	17259	29290;29291;29292	29290					0.14627262273370434
LAVLNSGVQ	9	Unmodified	_LAVLNSGVQ_					0	0	0		ENSG00000167604|ENST00000606253|NFKBID;nc|ENSG00000167604|Q8NI38|NFKBID	ENSG00000167604|ENST00000606253|NFKBID	ENSG00000167604|ENST00000606253|NFKBID	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.76123046875	2	450.761092	899.507631	0.18364	8.278E-05	-0.15966	-7.1969E-05	0.023983	1.0811E-05	450.7609047940763	37.497	0.57988	37.596	37.313	37.893	0.099277					37	20	2	0	0	0	0.38563	1	2161	2161		58.782	7.4465	1	199610			25614	6305	17250	17260	29293	29293					0.05385784897487156
LAVLPPLR	8	Unmodified	_LAVLPPLR_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.24920654296875	2	439.794738	877.574923	1.1377	0.00050036	-3.9246	-0.001726	-2.7869	-0.0012257	439.79292779511906	23.446	0.54166	22.871	22.467	23.009	-0.57415					17	12	2	0	0	0	0.4196	1	1036	1036		12.959	8.9739	1	44344	+		25615	23574	17251	17261	29294	29294					0.1312385989908762
LAVLPPLR	8	Unmodified	_LAVLPPLR_					0	0	0			REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	REV__ENST00000566735.1_1_16:19125342-19127388:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	439.794738	877.574923	0.51243	0.00022537	-7.4103	-0.003259	-6.8978	-0.0030336	439.79287974652345	22.798	0.093943	22.79	22.709	22.803	-0.0088215	-0.10285	-0.0010854	NaN	25.45	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28089	+		25616	23574	17251	17261							0.1312385989908762
LAVLQWLQLPK	11	Unmodified	_LAVLQWLQLPK_					0	0	0		ENSG00000197594|ENST00000647893|ENPP1	ENSG00000197594|ENST00000647893|ENPP1	ENSG00000197594|ENST00000647893|ENPP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.27386474609375	3	436.939458	1307.79654	-0.88692	-0.00038753	1.5458	0.00067543	0.6589	0.0002879	436.9399896728005	46.653	1.2955	46.625	46.139	47.434	-0.028782					103	32	5	0	0	0	0.76251	1	3909	3909		19.263	0.73163	1	597140			25617	8179	17252	17262	29295	29295					0.1549567480474252
LAVLQWLQLPK	11	Unmodified	_LAVLQWLQLPK_					0	0	0		ENSG00000197594|ENST00000647893|ENPP1	ENSG00000197594|ENST00000647893|ENPP1	ENSG00000197594|ENST00000647893|ENPP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.9395751953125	3	436.939458	1307.79654	-0.36541	-0.00015966	0.86043	0.00037595	0.49502	0.00021629	436.93986861575377	52.649	0.95123	53.072	52.681	53.632	0.42348					63	22	4	0	0	0	0.74022	1	5306	5306		24.232	2.4514	1	826520			25618	8179	17252	17262	29296	29296					0.1549567480474252
LAVLRAVK	8	Unmodified	_LAVLRAVK_					0	0	0			REV__ENST00000514271.2_1_12:122821255-122825325:-|nuORF	REV__ENST00000514271.2_1_12:122821255-122825325:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3001708984375	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.83058	1	6975	6975		12.959	0.75233	1	1702600	+		25619	28008	17253	17263	29297	29297					0.14627262273359065
LAVLRAVK	8	Unmodified	_LAVLRAVK_					0	0	0			REV__ENST00000514271.2_1_12:122821255-122825325:-|nuORF	REV__ENST00000514271.2_1_12:122821255-122825325:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3002624511719	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.85787	1	8065	8065		9.4706	0	1	6323600	+		25620	28008	17253	17263	29298	29298					0.14627262273359065
LAVLTGEPLI	10	Unmodified	_LAVLTGEPLI_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6;nc|ENSG00000130653|Q6ZV29-3|PNPLA7;nc|ENSG00000130653|Q6ZV29-4|PNPLA7;nc|ENSG00000130653|Q6ZV29|PNPLA7;ENSG00000130653|ENST00000406427|PNPLA7	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.31787109375	2	513.3157	1024.61685	0.29738	0.00015265	1.324	0.00067964	1.6214	0.00083229	513.3163353757171	43.153	1.1401	43.209	42.87	44.01	0.056744					71	27	3	0	0	0	0.86589	1	2990	2990		29.15	0.89528	1	375110			25621	885	17254	17264	29299	29299					0.10552370796949617
LAVLTIIPS	9	Unmodified	_LAVLTIIPS_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.80157470703125	2	463.799686	925.584819	-0.22039	-0.00010222	2.8768	0.0013343	2.6564	0.0012321	463.80077563915114	45.485	0.74849	45.417	45.021	45.77	-0.068634					44	18	3	0	0	0	0.7932	1	3256	3256		24.203	5.8783	1	207040	+		25622	18987	17255	17265	29300	29300					0.11905003113804469
LAVLVAKR	8	Unmodified	_LAVLVAKR_					0	0	0			REV__ENSG00000204394|ENST00000375663|VARS1	REV__ENSG00000204394|ENST00000375663|VARS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3001708984375	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.81724	1	6620	6620		14.664	5.1935	1	1072400	+		25623	23487	17256	17266	29301	29301					0.14627262273359065
LAVLVAKR	8	Unmodified	_LAVLVAKR_					0	0	0			REV__ENSG00000204394|ENST00000375663|VARS1	REV__ENSG00000204394|ENST00000375663|VARS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2998046875	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.82464	1	7263	7263		21.702	7.0382	1	881780	+		25624	23487	17256	17266	29302	29302					0.14627262273359065
LAVLVAKR	8	Unmodified	_LAVLVAKR_					0	0	0			REV__ENSG00000204394|ENST00000375663|VARS1	REV__ENSG00000204394|ENST00000375663|VARS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3002014160156	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81548	1	6864	6864		20.482	5.8177	1	1921500	+		25625	23487	17256	17266	29303	29303					0.14627262273359065
LAVLVAKR	8	Unmodified	_LAVLVAKR_					0	0	0			REV__ENSG00000204394|ENST00000375663|VARS1	REV__ENSG00000204394|ENST00000375663|VARS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3001708984375	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.81724	1	6706	6706		14.664	0	1	1819800	+		25626	23487	17256	17266	29304	29304					0.14627262273359065
LAVLVAKR	8	Unmodified	_LAVLVAKR_					0	0	0			REV__ENSG00000204394|ENST00000375663|VARS1	REV__ENSG00000204394|ENST00000375663|VARS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002624511719	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.81724	1	8357	8357		14.664	0.88877	1	5485100	+		25627	23487	17256	17266	29305	29305					0.14627262273359065
LAVLVAKR	8	Unmodified	_LAVLVAKR_					0	0	0			REV__ENSG00000204394|ENST00000375663|VARS1	REV__ENSG00000204394|ENST00000375663|VARS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30029296875	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.82419	1	8209	8209		13.775	0.81615	1	6323600	+		25628	23487	17256	17266	29306	29306					0.14627262273359065
LAVLVGTTIRL	11	Unmodified	_LAVLVGTTIRL_					0	0	0		ENSG00000186806|ENST00000335624|VSIG10L;nc|ENSG00000186806|Q86VR7-2|VSIG10L	ENSG00000186806|ENST00000335624|VSIG10L	ENSG00000186806|ENST00000335624|VSIG10L	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	578.37451171875	2	578.376623	1154.73869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.895	1	50.871	50.371	51.371	-0.02343								0	0	0	0.56276	1	4428	4428		28.081	2.5074	1				25629	7820	17257	17267	29307	29307					0.16751412879307281
LAVLVIGK	8	Unmodified	_LAVLVIGK_					0	0	0			REV__nc|ENSG00000008294|O60271-9|SPAG9	REV__nc|ENSG00000008294|O60271-9|SPAG9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852783203125	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.91005	1	1727	1727		42.474	7.2737	1	1965300	+		25630	16133	17258	17268	29308	29308					0.13981055150509292
LAVLVKGL	8	Unmodified	_LAVLVKGL_					0	0	0			REV__ENSG00000117868|ENST00000275418|ESYT2	REV__ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.82464	1	1820	1820		21.702	1.2205	1	1953100	+		25631	18285	17259	17269	29309	29309					0.13981055150509292
LAVMEAVSLL	10	Unmodified	_LAVMEAVSLL_					0	0	0			REV__ENSG00000177051|ENST00000317683|FBXO46	REV__ENSG00000177051|ENST00000317683|FBXO46	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3035888671875	2	523.301736	1044.58892	0.69703	0.00036476	2.6051	0.0013632	3.3021	0.001728	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.86589	1	8393	8393		29.15	1.2673	1	3801600	+		25632	22174	17260	17270	29310	29310					0.06840724545213561
LAVPILSTV	9	Unmodified	_LAVPILSTV_					0	0	0		nc|ENSG00000154914|Q70EL4-4|USP43;ENSG00000154914|ENST00000285199|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7895812988281	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.7932	1	2679	2679		24.203	4.8428	1	1012300			25633	5304	17261	17271	29311	29311					0.10984716596749422
LAVPILSTV	9	Unmodified	_LAVPILSTV_					0	0	0		nc|ENSG00000154914|Q70EL4-4|USP43;ENSG00000154914|ENST00000285199|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7910461425781	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.77546	3	3181	3181;3718;3754		31.955	4.5949	1	608260			25634	5304	17261	17271	29312;29313;29314	29312					0.10984716596749422
LAVPILSTV	9	Unmodified	_LAVPILSTV_					0	0	0		nc|ENSG00000154914|Q70EL4-4|USP43;ENSG00000154914|ENST00000285199|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7916259765625	2	456.791861	911.569169	0.05486	2.506E-05	2.6152	0.0011946	2.6701	0.0012197	456.79295826454774	49.784	2.1713	49.788	48.709	50.88	0.0035973					85	53	2	0	0	0	0.7932	1	4201	4201		24.203	0	1	208660			25635	5304	17261	17271	29315	29315					0.10984716596749422
LAVPILSTV	9	Unmodified	_LAVPILSTV_					0	0	0		nc|ENSG00000154914|Q70EL4-4|USP43;ENSG00000154914|ENST00000285199|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7930908203125	2	456.791861	911.569169	0.20144	9.2015E-05	2.7795	0.0012696	2.9809	0.0013616	456.79301419254114	38.74	1.332	38.834	38.396	39.728	0.094318					137	38	4	0	0	0	0.7932	1	2297	2297		25.45	3.7478	1	1693200			25636	5304	17261	17271	29316	29316					0.10984716596749422
LAVPILSTV	9	Unmodified	_LAVPILSTV_					0	0	0		nc|ENSG00000154914|Q70EL4-4|USP43;ENSG00000154914|ENST00000285199|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.78985595703125	2	456.791861	911.569169	0.2225	0.00010163	1.2501	0.00057106	1.4726	0.00067269	456.79228647464913	41.052	1.411	41.126	40.545	41.956	0.073418					84	43	2	0	0	0	0.7932	1	2727	2727		21.96	2.5999	1	319050			25637	5304	17261	17271	29317	29317					0.10984716596749422
LAVPILSTV	9	Unmodified	_LAVPILSTV_					0	0	0		nc|ENSG00000154914|Q70EL4-4|USP43;ENSG00000154914|ENST00000285199|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	nc|ENSG00000154914|Q70EL4-4|USP43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7904968261719	2	456.791861	911.569169	0.30037	0.00013721	2.5195	0.0011509	2.8199	0.0012881	456.79289757972145	49.9	2.3678	49.942	48.602	50.969	0.04224					107	64	2	0	0	0	0.7932	1	3818	3818		25.45	0	1	208080			25638	5304	17261	17271	29318	29318					0.10984716596749422
LAVPLGEKT	9	Unmodified	_LAVPLGEKT_					0	0	0			REV__ENST00000427559.1_1_2:112698001-112698598:-|nuORF	REV__ENST00000427559.1_1_2:112698001-112698598:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.27825927734375	2	464.279118	926.543683	0.32303	0.00014997	0.058601	2.7207E-05	0.38163	0.00017718	464.2791736750263	51.466	0.7576	51.526	51.064	51.822	0.059719					32	20	2	0	0	0	0.47272	1	4106	4106		53.351	3.9099	1	169530	+		25639	16932	17262	17272	29319	29319					0.07747242074333371
LAVPLQLA	8	Unmodified	_LAVPLQLA_					0	0	0			REV__ENSG00000167880|ENST00000301607|EVPL	REV__ENSG00000167880|ENST00000301607|EVPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2674560546875	2	412.765646	823.516739	-1.8859	-0.00077844	3.9578	0.0016337	2.0719	0.00085522	412.7678129581843	48.855	3.3742	48.881	47.541	50.915	0.025574					176	94	2	0	0	0	0.80963	1	3646	3646		15.636	0	1	621000	+		25640	21433	17263	17273	29320	29320					0.0979217825380374
LAVPRYDL	8	Unmodified	_LAVPRYDL_					0	0	0			REV__ENSG00000171862|ENST00000371953|PTEN	REV__ENSG00000171862|ENST00000371953|PTEN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.2589111328125	2	473.77146	945.528367	0.017089	8.0964E-06	0.19875	9.4164E-05	0.21584	0.00010226	473.7712375268007	50.396	0.54918	50.393	50.106	50.655	-0.0020447					22	12	2	0	0	0	0.4196	1	4279	4279		28.254	0	1	110500	+		25641	21780	17264	17274	29321	29321					0.05342375277132305
LAVPVRLK	8	Unmodified	_LAVPVRLK_					0	0	0		ENST00000454117.1_1_1:23695790-23697703:+|nuORF;ENST00000437367.3_1_1:23695790-23698012:+|nuORF;nc|ENSG00000249087|Q8NC38|ZNF436-AS1;ENST00000335648.3_1_1:23695790-23696168:+|nuORF;ENST00000518821.1_1_1:23695790-23697703:+|nuORF	ENST00000454117.1_1_1:23695790-23697703:+|nuORF	ENST00000454117.1_1_1:23695790-23697703:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.3059997558594	2	448.308013	894.601472	0.076818	3.4438E-05	-2.764	-0.0012391	-2.6872	-0.0012047	448.3066406433988	20.825	2.1311	20.366	19.266	21.397	-0.4591					84	48	2	0	0	0	0.86288	1	689	689		26.796	0	1	263520			25642	10161	17265	17275	29322	29322					0.1499554879040943
LAVQAVAHQS	10	Unmodified	_LAVQAVAHQS_					0	0	0			REV__ENST00000470273.5_1_6:36981367-36981682:+|nuORF	REV__ENST00000470273.5_1_6:36981367-36981682:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2820434570312	2	512.282723	1022.55089	1.2711	0.00065114	-3.95	-0.0020235	-2.6789	-0.0013724	512.2806294768477	86.671	3.241	86.597	85.234	88.475	-0.074005					135	75	2	0	0	0	0.8608	1	9020	9020		34.173	5.023	1	387010	+		25643	27086	17266	17276	29323	29323					0.0405197467475773
LAVQLPAI	8	Unmodified	_LAVQLPAI_					0	0	0			REV__ENSG00000001626|ENST00000003084|CFTR	REV__ENSG00000001626|ENST00000003084|CFTR	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7672424316406	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.601	1	42.572	42.072	43.072	-0.029461								0	0	0	0.29694	1	3192	3192		37.028	1.8278	1		+		25644	16042	17267	17277	29324	29324					0.09792178253792372
LAVQLPAI	8	Unmodified	_LAVQLPAI_					0	0	0			REV__ENSG00000001626|ENST00000003084|CFTR	REV__ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2680969238281	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.89457	1	2094	2094		37.028	5.0736	1	1619400	+		25645	16042	17267	17277	29325	29325					0.09792178253792372
LAVQPGKV	8	Unmodified	_LAVQPGKV_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2579040527344	2	406.255446	810.496338	0.27279	0.00011082	3.6804	0.0014952	3.9532	0.001606	406.25677816056157	49.48	2.6493	49.522	48.485	51.134	0.042236					135	72	3	0	0	0	0.85277	1	3908	3908		25.45	6.0902	1	326490	+		25646	18623	17268	17278	29326	29326					0.08351007594001203
LAVQQLHA	8	Unmodified	_LAVQQLHA_					0	0	0			REV__ENST00000575231.1_1_16:67963850-67964919:-|nuORF	REV__ENST00000575231.1_1_16:67963850-67964919:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.25518798828125	2	440.255977	878.497401	-1.0794	-0.00047521	-0.44173	-0.00019447	-1.5211	-0.00066968	440.25573050255707	67.457	0.77168	67.51	67.2	67.972	0.052368					65	27	4	0	0	0	0.86288	1	6005	6005		26.796	7.4361	1	460120	+		25647	28983	17269	17279	29327	29327					0.05329221962892916
LAVQVVGLL	9	Unmodified	_LAVQVVGLL_					0	0	0		ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30126953125	2	456.299853	910.585153	-1.7927	-0.00081802	3.97	0.0018115	2.1773	0.00099349	456.30151188064457	45.052	1.9056	45.052	44.154	46.06	0					117	46	3	0	0	0	0.77546	1	3358	3358		31.955	2.8053	1	498210			25648	6837	17270	17280	29328	29328					0.12628422833677178
LAVQVVGLL	9	Unmodified	_LAVQVVGLL_					0	0	0		ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.301025390625	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.7932	1	2038	2038		25.45	1.2474	1	1057300			25649	6837	17270	17280	29329	29329					0.12628422833677178
LAVQVVGLL	9	Unmodified	_LAVQVVGLL_					0	0	0		ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3009948730469	2	456.299853	910.585153	0.15231	6.9501E-05	2.9243	0.0013344	3.0766	0.0014039	456.30102814495837	33.268	1.6065	33.378	33.034	34.64	0.10991					186	70	4	0	0	0	0.7932	1	1593	1593		26.796	0	1	1696300			25650	6837	17270	17280	29330	29330					0.12628422833677178
LAVRFEKT	8	Unmodified	_LAVRFEKT_					0	0	0			REV__ENST00000342085.8_1_16:2647764-2648328:+|nuORF	REV__ENST00000342085.8_1_16:2647764-2648328:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.284423828125	2	482.284734	962.554916	0.4196	0.00020237	-0.77961	-0.00037599	-0.36001	-0.00017363	482.2842183743908	51.297	1.1265	51.732	51.326	52.452	0.43505					65	26	4	0	0	0	0.36381	3	5081	5059;5081;5107		82.305	5.5309	1	3842600	+		25651	25267	17271	17281	29331;29332;29333	29332					0.07214064168476853
LAVRFGGPVP	10	Unmodified	_LAVRFGGPVP_					0	0	0		ENST00000394947.7_1_15:75722732-75743878:-|nuORF;ENST00000394949.8_1_15:75722732-75743878:-|nuORF;ENST00000565264.1_1_15:75728701-75743878:-|nuORF	REV__nc|ENSG00000095596|O43174-2|CYP26A1	REV__nc|ENSG00000095596|O43174-2|CYP26A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.7993469238281	2	506.800552	1011.58655	-0.048814	-2.4739E-05	0.95871	0.00048587	0.90989	0.00046113	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.86201	1	3138	3138		24.203	0	1	475290			25652	17065	17272	17282	29334	29334					0.0812205692243424
LAVRFKTK	8	Unmodified	_LAVRFKTK_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.8103332519531	2	481.810919	961.607286	-0.43797	-0.00021102	0.58518	0.00028195	0.14721	7.093E-05	481.81099748336504	30.434	0.65466	30.438	30.185	30.84	0.0037193					22	14	2	0	0	0	0.88944	1	2013	2013		57.811	2.3071	1	305800			25653	5220	17273	17283	29335	29335					0.1249464730208274
LAVRIKQKP	9	Unmodified	_LAVRIKQKP_					0	0	0			REV__ENSG00000023608|ENST00000216294|SNAPC1	REV__ENSG00000023608|ENST00000216294|SNAPC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.808349609375	2	526.850576	1051.6866	2.1456	0.0011304	-0.60772	-0.00032018	1.5379	0.00081024	526.8504968873892	100.38	0.12304	100.72	100.64	100.76	0.33295					4	2	2	0	0	0	0.20789	1	12148	12148		11.511	0	1	33746	+		25654	16252	17274	17284	29336	29336					0.1628229425623431
LAVRKRAV	8	Unmodified	_LAVRKRAV_					0	0	0		ENSG00000144712|ENST00000456430|CAND2;nc|ENSG00000144712|O75155-2|CAND2	ENSG00000144712|ENST00000456430|CAND2	ENSG00000144712|ENST00000456430|CAND2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7932434082031	2	456.808711	911.602869	-0.068733	-3.1398E-05	1.8768	0.00085732	1.808	0.00082593	456.8089834142827	35.38	0.34092	35.628	35.515	35.856	0.2477					12	8	2	0	0	0	0.4196	1	2721	2721		37.028	10.232	1	59655			25655	4727	17275	17285	29337	29337					0.1435318287917653
LAVRLTTKRPP	11	Unmodified	_LAVRLTTKRPP_					0	0	0			REV__ENST00000520347.5_1_8:102216873-102216927:-|nuORF	REV__ENST00000520347.5_1_8:102216873-102216927:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3909301757812	2	626.398422	1250.78229	0.92581	0.00057992	-2.3098	-0.0014469	-1.384	-0.00086694	626.3968728560952	110.01	0.77213	110.08	109.8	110.57	0.073685					34	27	2	0	0	0	0.17295	1	11812	11812		22.58	3.4761	1	935690	+		25656	28100	17276	17286	29338	29338					0.16693022376466615
LAVSDMGL	8	Unmodified	_LAVSDMGL_					0	0	0		ENSG00000176895|ENST00000641490|OR51A7	ENSG00000176895|ENST00000641490|OR51A7	ENSG00000176895|ENST00000641490|OR51A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2091369628906	2	403.209847	804.40514	0.59952	0.00024173	-2.8003	-0.0011291	-2.2008	-0.00088739	403.20865750603866	85.732	1.8224	85.881	85.428	87.25	0.14857					100	42	4	0	0	0	0.82464	1	8392	8392		21.702	2.3424	1	1321000			25657	7102	17277	17287	29339	29339					-0.004886241656436141
LAVSGAQTTRP	11	Unmodified	_LAVSGAQTTRP_					0	0	0		ENSG00000182704|ENST00000333090|TSKU;chr11:76792769-76795609|22|14.36|0.33|5.45|+|ENST00000527881|TSKU,TSKU	ENSG00000182704|ENST00000333090|TSKU	ENSG00000182704|ENST00000333090|TSKU	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.8062744140625	2	550.806562	1099.59857	-1.5611	-0.00085986	1.7466	0.00096206	0.18555	0.0001022	550.8073038939729	29.672	1.5276	29.666	29.02	30.547	-0.0064812					96	34	5	0	0	0	0.31387	1	1891	1891		72.879	5.3856	1	1060600			25658	108	17278	17288	29340	29340					0.052756288749378655
LAVSLAPDLA	10	Unmodified	_LAVSLAPDLA_					0	0	0		ENST00000246747.8_1_11:64789388-64789631:+|nuORF	ENST00000246747.8_1_11:64789388-64789631:+|nuORF	ENST00000246747.8_1_11:64789388-64789631:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.28875732421875	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.856	1	77.805	77.305	78.305	-0.050789								0	0	0	0.45132	1	7742	7742		37.159	0.13063	1				25659	9274	17279	17289	29341	29341					0.06871224728763536
LAVSLILSP	9	Unmodified	_LAVSLILSP_					0	0	0		ENST00000539693.1_1_19:19313985-19314099:-|nuORF	ENST00000539693.1_1_19:19313985-19314099:-|nuORF	ENST00000539693.1_1_19:19313985-19314099:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.79107666015625	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.7932	1	3422	3422		23.042	4.7181	1	759950			25660	13483	17280	17290	29342	29342					0.10984716596760791
LAVSLKKPLVI	11	Unmodified	_LAVSLKKPLVI_					0	0	0		ENSG00000157014|ENST00000448281|TATDN2	ENSG00000157014|ENST00000448281|TATDN2	ENSG00000157014|ENST00000448281|TATDN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8666381835938	2	590.905017	1179.79548	0.89131	0.00052668	-1.0439	-0.00061683	-0.15256	-9.015E-05	590.904064711979	103.18	0.11659	103.31	103.21	103.33	0.12622					4	2	2	0	0	0	0.17431	1	10895	10895		31.53	0	1	111150			25661	5406	17281	17291	29343	29343					0.21277460435840112
LAVSLKKPLVI	11	Unmodified	_LAVSLKKPLVI_					0	0	0		ENSG00000157014|ENST00000448281|TATDN2	ENSG00000157014|ENST00000448281|TATDN2	ENSG00000157014|ENST00000448281|TATDN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8665771484375	2	590.905017	1179.79548	-1.319	-0.00077942	-2.8437	-0.0016803	-4.1627	-0.0024598	590.903022791043	103.99	0.15237	104.08	103.95	104.1	0.093857					5	3	2	0	0	0	0.1729	1	10954	10954		26.693	11.051	1	30930			25662	5406	17281	17291	29344	29344					0.21277460435840112
LAVSLKPP	8	Unmodified	_LAVSLKPP_					0	0	0		ENSG00000099904|ENST00000334554|ZDHHC8;nc|ENSG00000099904|Q9ULC8-2|ZDHHC8;nc|ENSG00000099904|Q9ULC8-3|ZDHHC8	ENSG00000099904|ENST00000334554|ZDHHC8	ENSG00000099904|ENST00000334554|ZDHHC8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2680358886719	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.87479	1	2440	2440		30.504	5.0535	1	1649400			25663	1776	17282	17292	29345	29345					0.0979217825380374
LAVSLLLPS	9	Unmodified	_LAVSLLLPS_					0	0	0		ENST00000465147.1_1_3:122662281-122667506:-|nuORF;nc|ENSG00000082684|Q9P283-2|SEMA5B;nc|ENSG00000082684|Q9P283-3|SEMA5B;ENSG00000082684|ENST00000357599|SEMA5B;nc|ENSG00000082684|Q9P283-4|SEMA5B	ENST00000465147.1_1_3:122662281-122667506:-|nuORF	ENST00000465147.1_1_3:122662281-122667506:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7903747558594	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.78058	1	3058	3058		30.504	0	1	652510			25664	1489	17283	17293	29346	29346					0.10984716596760791
LAVSLPSLI	9	Unmodified	_LAVSLPSLI_					0	0	0			REV__CON__P28800	REV__CON__P28800	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7886962890625	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.7932	1	2687	2687		25.45	0	1	1012300	+	+	25665	15988	17284	17294	29347	29347					0.10984716596760791
LAVSLPSLI	9	Unmodified	_LAVSLPSLI_					0	0	0			REV__CON__P28800	REV__CON__P28800	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7899475097656	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.399	1	53.399	52.899	53.899	0								0	0	0	0.2969	1	4432	4432		31.955	0	1		+	+	25666	15988	17284	17294	29348	29348					0.10984716596760791
LAVSLPSLI	9	Unmodified	_LAVSLPSLI_					0	0	0			REV__CON__P28800	REV__CON__P28800	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7900390625	2	456.791861	911.569169	0.18235	8.3295E-05	0.58937	0.00026922	0.77171	0.00035251	456.79200220887	40.258	1.2138	40.227	39.65	40.864	-0.030987					94	32	4	0	0	0	0.67235	1	2880	2880		42.474	0	1	1159000	+	+	25667	15988	17284	17294	29349	29349					0.10984716596760791
LAVSLPSLI	9	Unmodified	_LAVSLPSLI_					0	0	0			REV__CON__P28800	REV__CON__P28800	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7904052734375	2	456.791861	911.569169	0.068918	3.1481E-05	2.6574	0.0012139	2.7263	0.0012454	456.79291839387025	47.945	1.4401	47.936	47.69	49.13	-0.0093269					51	37	2	0	0	0	0.74721	1	4071	4071		37.159	6.6555	1	229540	+	+	25668	15988	17284	17294	29350	29350					0.10984716596760791
LAVSLPSLI	9	Unmodified	_LAVSLPSLI_					0	0	0			REV__CON__P28800	REV__CON__P28800	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.791259765625	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.878	1	49.875	49.375	50.375	-0.0030327								0	0	0	0.31472	1	4195	4195		25.45	0	1		+	+	25669	15988	17284	17294	29351	29351					0.10984716596760791
LAVSLPSLI	9	Unmodified	_LAVSLPSLI_					0	0	0			REV__CON__P28800	REV__CON__P28800	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7919921875	2	456.791861	911.569169	-1.3117	-0.00059915	2.7647	0.0012629	1.4531	0.00066375	456.79301301178594	40.135	1.4029	40.092	39.45	40.853	-0.043697					111	34	4	0	0	0	0.69914	1	2907	2907		40.573	1.7665	1	1093900	+	+	25670	15988	17284	17294	29352	29352					0.10984716596760791
LAVSLPSLI	9	Unmodified	_LAVSLPSLI_					0	0	0			REV__CON__P28800	REV__CON__P28800	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7918701171875	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.76996	1	3205	3205		33.516	0	1	608260	+	+	25671	15988	17284	17294	29353	29353					0.10984716596760791
LAVSLPSLI	9	Unmodified	_LAVSLPSLI_					0	0	0			REV__CON__P28800	REV__CON__P28800	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.78961181640625	2	456.791861	911.569169	0.25715	0.00011746	2.1654	0.00098913	2.4225	0.0011066	456.7927258490334	44.888	1.8593	44.937	44.002	45.861	0.048996					84	45	2	0	0	0	0.43338	1	3309	3309		55.504	9.5523	1	184410	+	+	25672	15988	17284	17294	29354	29354					0.10984716596760791
LAVSLPSLI	9	Unmodified	_LAVSLPSLI_					0	0	0			REV__CON__P28800	REV__CON__P28800	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7919616699219	2	456.791861	911.569169	0.30037	0.00013721	2.5195	0.0011509	2.8199	0.0012881	456.79289757972145	49.9	2.3678	49.942	48.602	50.969	0.04224					107	64	2	0	0	0	0.7932	1	3885	3885		25.45	1.2474	1	208080	+	+	25673	15988	17284	17294	29355	29355					0.10984716596760791
LAVSLPSLI	9	Unmodified	_LAVSLPSLI_					0	0	0			REV__CON__P28800	REV__CON__P28800	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	456.791861	911.569169	-1.2217	-0.00055805	3.0025	0.0013715	1.7808	0.00081347	456.79305669122596	44.619	0.519	45.082	44.785	45.304	0.46313	0.1729	0.00052074	NaN	55.504	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310050	+	+	25674	15988	17284	17294							0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.790771484375	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.72402	2	2545	2545;2632		38.806	0	1	1012300			25675	1945	17285	17295	29356;29357	29356					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.793212890625	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.47272	2	4110	4014;4110		53.351	0	1	186860			25676	1945	17285	17295	29358;29359	29359					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30047607421875	2	456.791861	911.569169	-1.7624	-0.00080507	4.1258	0.0018846	2.3633	0.0010796	456.7936127130948	47.152	0.61518	47.152	46.658	47.273	0					28	17	2	0	0	0	0.20789	1	3598	3598		29.15	0	1	140190			25677	1945	17285	17295	29360	29360					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7917175292969	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.69914	3	3200	3147;3190;3200		40.573	0	1	662040			25678	1945	17285	17295	29361;29362;29363	29363					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79107666015625	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.547	1	49.544	49.044	50.044	-0.0030327								0	0	0	0.31828	1	4150	4150		24.203	0	1				25679	1945	17285	17295	29364	29364					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7925109863281	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.642	1	49.639	49.139	50.139	-0.0030327								0	0	0	0.33676	1	4163	4163		18.324	0	1				25680	1945	17285	17295	29365	29365					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79180908203125	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.72402	1	3266	3266		38.806	0	1	652510			25681	1945	17285	17295	29366	29366					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7931213378906	2	456.791861	911.569169	-0.73784	-0.00033704	3.4705	0.0015853	2.7326	0.0012482	456.79333098184276	49.768	2.9671	49.744	48.401	51.368	-0.024029					154	74	4	0	0	0	0.72402	2	4477	4233;4477		38.806	0	1	161210			25682	1945	17285	17295	29367;29368	29368					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79290771484375	2	456.791861	911.569169	-1.4265	-0.00065161	4.1949	0.0019162	2.7684	0.0012646	456.7936601394385	37.79	2.3589	37.801	37.33	39.689	0.011173					114	54	4	0	0	0	0.78536	1	2481	2481		29.15	0	1	2031500			25683	1945	17285	17295	29369	29369					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7901611328125	2	456.791861	911.569169	-1.2294	-0.00056156	2.5606	0.0011697	1.3313	0.00060812	456.79289004576646	40.059	1.2176	40.068	39.557	40.774	0.0092773					97	29	4	0	0	0	0.58151	1	2903	2903		47.916	0	1	1129600			25684	1945	17285	17295	29370	29370					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79193115234375	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.39977	2	3146	2981;3146		57.811	0	1	608260			25685	1945	17285	17295	29371;29372	29372					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7913818359375	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.77546	1	2411	2411		31.955	0	1	1834900			25686	1945	17285	17295	29373	29373					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7914733886719	2	456.791861	911.569169	-1.2455	-0.00056893	2.9854	0.0013637	1.7399	0.00079477	456.79309475807366	41.513	1.1362	41.517	40.891	42.027	0.0043983					69	33	3	0	0	0	0.77546	1	2702	2702		31.955	0	1	293920			25687	1945	17285	17295	29374	29374					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7919616699219	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.77546	1	2892	2892		31.955	0	1	548640			25688	1945	17285	17295	29375	29375					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7890319824219	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.62	1	45.632	45.132	46.132	0.012058								0	0	0	0.32159	1	3297	3297		23.042	0	1				25689	1945	17285	17295	29376	29376					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3009338378906	2	456.791861	911.569169	-1.2582	-0.00057471	4.1173	0.0018807	2.8591	0.001306	456.7935786665897	35.284	0.2506	35.323	35.123	35.373	0.038643					12	9	2	0	0	0	0.20789	1	1821	1821		30.504	0	1	34335			25690	1945	17285	17295	29377	29377					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79296875	2	456.791861	911.569169	0.17991	8.2183E-05	2.7362	0.0012499	2.9161	0.001332	456.7930101461281	36.153	2.2506	36.256	35.136	37.386	0.10306					210	68	4	0	0	0	0.77546	1	2079	2079		31.955	0	1	3531000			25691	1945	17285	17295	29378	29378					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7911376953125	2	456.791861	911.569169	0.2125	9.7068E-05	1.796	0.00082039	2.0085	0.00091746	456.79255962893114	39.979	1.1329	40.06	39.42	40.553	0.081348					88	31	4	0	0	0	0.62081	1	2467	2467		45.952	0	1	876000			25692	1945	17285	17295	29379	29379					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79150390625	2	456.791861	911.569169	0.23747	0.00010847	2.1705	0.00099146	2.408	0.0010999	456.79269786067573	42.365	2.4539	42.43	41.781	44.235	0.065037					168	63	3	0	0	0	0.7932	1	2813	2813		24.203	0	1	556840			25693	1945	17285	17295	29380	29380					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30133056640625	2	456.791861	911.569169	0.25715	0.00011746	2.1654	0.00098913	2.4225	0.0011066	456.7927258490334	44.888	1.8593	44.937	44.002	45.861	0.048996					84	45	2	0	0	0	0.20789	1	3197	3197		24.203	0	1	184410			25694	1945	17285	17295	29381	29381					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3019714355469	2	456.791861	911.569169	0.28566	0.00013049	2.4264	0.0011084	2.7121	0.0012389	456.79282926029407	47.997	0.84348	48.035	47.79	48.633	0.037735					45	24	2	0	0	0	0.20789	1	3629	3629		24.203	0	1	199350			25695	1945	17285	17295	29382	29382					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7916564941406	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.78536	1	2856	2856		29.15	0	1	605230			25696	1945	17285	17295	29383	29383					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7926330566406	2	456.791861	911.569169	-0.22016	-0.00010057	2.6195	0.0011965	2.3993	0.001096	456.79291197659967	44.777	1.8237	44.709	43.946	45.77	-0.068634					85	44	3	0	0	0	0.69914	1	3299	3299		40.573	0	1	224230			25697	1945	17285	17295	29384	29384					0.10984716596760791
LAVSLTVPL	9	Unmodified	_LAVSLTVPL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	456.791861	911.569169	-0.39395	-0.00017995	3.7679	0.0017211	3.374	0.0015412	456.7933527056491	49.92	0.82553	50.368	49.98	50.805	0.44761	0.11845	-0.00017959	NaN	53.351	27	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87744			25698	1945	17285	17295							0.10984716596760791
LAVSPLALV	9	Unmodified	_LAVSPLALV_					0	0	0			REV__ENSG00000156885|ENST00000287490|COX6A2	REV__ENSG00000156885|ENST00000287490|COX6A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7876892089844	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	1	2549	2549		24.203	1.1603	1	11532000	+		25699	20514	17286	17296	29385	29385					0.11308733942314575
LAVSPPKI	8	Unmodified	_LAVSPPKI_					0	0	0		THE1D_dup11999|chr19:49328113-49328466:-|1.0328815182934572|0.3056025317610205|1.76|63.0|1|1|sense	THE1D_dup11999|chr19:49328113-49328466:-|1.0328815182934572|0.3056025317610205|1.76|63.0|1|1|sense	THE1D_dup11999|chr19:49328113-49328466:-|1.0328815182934572|0.3056025317610205|1.76|63.0|1|1|sense	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7672119140625	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.162	1	40.243	39.743	40.743	0.081345								0	0	0	0.29631	1	2525	2525		25.45	0	1				25700	30338	17287	17297	29386	29386					0.09792178253815109
LAVSVLGGP	9	Unmodified	_LAVSVLGGP_					0	0	0		ENST00000567948.1_2_15:55611123-55611258:-|nuORF;ENST00000563262.5_1_15:55606344-55611258:-|nuORF	ENST00000567948.1_2_15:55611123-55611258:-|nuORF	ENST00000567948.1_2_15:55611123-55611258:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2578430175781	2	406.747453	811.480354	0.26142	0.00010633	3.6692	0.0014924	3.9306	0.0015988	406.7489569580221	47.984	1.6449	48.022	47.742	49.387	0.037731					67	44	2	0	0	0	0.20789	1	3666	3666		23.042	0	1	135030			25701	13865	17288	17298	29387	29387					0.06707301357107553
LAVTILDIGP	10	Unmodified	_LAVTILDIGP_					0	0	0		ENSG00000182885|ENST00000333493|ADGRG3;ENST00000565902.1_1_16:57707332-57712261:+|nuORF;ENST00000565579.5_1_16:57702259-57712261:+|nuORF	ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3094177246094	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.473	1	51.45	50.95	51.95	-0.02343								0	0	0	0.45132	1	4505	4505		30.504	1.3541	1				25702	7479	17289	17299	29388	29388					0.09632084279905939
LAVTLLADPG	10	Unmodified	_LAVTLLADPG_					0	0	0			REV__ENST00000479866.5_1_12:48143124-48152369:-|nuORF;REV__nc|ENSG00000079337|O95398-2|RAPGEF3;REV__ENSG00000079337|ENST00000449771|RAPGEF3	REV__nc|ENSG00000079337|O95398-2|RAPGEF3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.28887939453125	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.264	1	74.396	73.896	74.896	0.13126								0	0	0	0.45132	1	6862	6862		27.882	0	1		+		25703	27406;29715;16781	17290	17300	29389	29389					0.06871224728752168
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.792236328125	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.77546	1	2580	2580		31.955	0	1	1012300			25704	830	17291	17301	29390	29390					0.10984716596760791
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.791259765625	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.7932	1	2865	2865		24.203	0	1	759950			25705	830	17291	17301	29391	29391					0.10984716596760791
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7912292480469	2	456.791861	911.569169	0.18235	8.3295E-05	0.58937	0.00026922	0.77171	0.00035251	456.79200220887	40.258	1.2138	40.227	39.65	40.864	-0.030987					94	32	4	0	0	0	0.76996	1	2870	2870		33.516	0	1	1159000			25706	830	17291	17301	29392	29392					0.10984716596760791
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7916259765625	2	456.791861	911.569169	0.068918	3.1481E-05	2.6574	0.0012139	2.7263	0.0012454	456.79291839387025	47.945	1.4401	47.936	47.69	49.13	-0.0093269					51	37	2	0	0	0	0.7932	1	4055	4055		18.324	0	1	229540			25707	830	17291	17301	29393	29393					0.10984716596760791
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7894592285156	2	456.791861	911.569169	-1.3117	-0.00059915	2.7647	0.0012629	1.4531	0.00066375	456.79301301178594	40.135	1.4029	40.092	39.45	40.853	-0.043697					111	34	4	0	0	0	0.69914	1	2981	2981		40.573	1.7665	1	1093900			25708	830	17291	17301	29394	29394					0.10984716596760791
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7917175292969	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.58151	1	3179	3179		47.916	7.343	1	652510			25709	830	17291	17301	29395	29395					0.10984716596760791
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7916259765625	2	456.791861	911.569169	0.05486	2.506E-05	2.6152	0.0011946	2.6701	0.0012197	456.79295826454774	49.784	2.1713	49.788	48.709	50.88	0.0035973					85	53	2	0	0	0	0.7932	1	4211	4211		18.324	0	1	208660			25710	830	17291	17301	29396	29396					0.10984716596760791
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79217529296875	2	456.791861	911.569169	-1.2485	-0.0005703	3.083	0.0014083	1.8345	0.000838	456.7931433333729	40.143	1.4449	40.149	39.563	41.008	0.0065041					84	46	2	0	0	0	0.77546	1	2512	2512		31.955	2.8053	1	1011500			25711	830	17291	17301	29397	29397					0.10984716596760791
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79132080078125	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.368	1	51.417	50.917	51.917	0.049896								0	0	0	0.31472	1	4086	4086		25.45	2.4077	1				25712	830	17291	17301	29398	29398					0.10984716596760791
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7904968261719	2	456.791861	911.569169	-0.092831	-4.2405E-05	1.6943	0.00077396	1.6015	0.00073156	456.792474958444	41.251	1.138	41.206	40.614	41.752	-0.045471					60	36	2	0	0	0	0.77546	1	2713	2713		31.955	0	1	309120			25713	830	17291	17301	29399	29399					0.10984716596760791
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7934265136719	2	456.791861	911.569169	-0.077665	-3.5477E-05	3.236	0.0014782	3.1584	0.0014427	456.79322700683537	35.356	1.7647	35.603	35.091	36.856	0.24769					159	44	4	0	0	0	0.72402	1	2695	2695		38.806	5.2906	1	6766600			25714	830	17291	17301	29400	29400					0.10984716596760791
LAVTLTVPV	9	Unmodified	_LAVTLTVPV_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7930603027344	2	456.791861	911.569169	1.3225	0.00060413	1.789	0.00081719	3.1115	0.0014213	456.79255750887523	35.219	1.7546	35.6	35.098	36.853	0.3812					157	44	4	0	0	0	0.69914	1	2727	2727		40.573	0	1	7423700			25715	830	17291	17301	29401	29401					0.10984716596760791
LAVTPTITLP	10	Unmodified	_LAVTPTITLP_					0	0	0			REV__ENST00000496331.1_1_20:4854564-4866632:-|nuORF	REV__ENST00000496331.1_1_20:4854564-4866632:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.318115234375	2	513.3157	1024.61685	-1.338	-0.00068682	3.7943	0.0019477	2.4563	0.0012608	513.317527909064	55.758	0.98328	55.758	55.175	56.159	0					47	26	3	0	0	0	0.86589	1	4779	4779		29.15	1.2673	1	140760	+		25716	16958	17292	17302	29402	29402					0.10552370796949617
LAVTRRSQ	8	Unmodified	_LAVTRRSQ_					0	0	0			REV__nc|ENSG00000132481|Q96LD4-2|TRIM47	REV__nc|ENSG00000132481|Q96LD4-2|TRIM47	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77752685546875	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.558	1	80.498	79.998	80.998	-0.059692								0	0	0	0.29631	1	8099	8099		25.45	0.94616	1		+		25717	19008	17293	17303	29403	29403					0.07307411740180214
LAVTSPPTLL	10	Unmodified	_LAVTSPPTLL_					0	0	0		nc|ENSG00000196091|Q00872-3|MYBPC1;nc|ENSG00000196091|Q00872-9|MYBPC1;nc|ENSG00000196091|Q00872-8|MYBPC1;nc|ENSG00000196091|Q00872|MYBPC1;nc|ENSG00000196091|Q00872-10|MYBPC1;nc|ENSG00000196091|Q00872-6|MYBPC1;nc|ENSG00000196091|Q00872-5|MYBPC1;nc|ENSG00000196091|Q00872-7|MYBPC1;nc|ENSG00000196091|Q00872-2|MYBPC1;ENSG00000196091|ENST00000361466|MYBPC1	nc|ENSG00000196091|Q00872-3|MYBPC1	nc|ENSG00000196091|Q00872-3|MYBPC1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30670166015625	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.753	1	50.803	50.303	51.303	0.049896								0	0	0	0.45132	1	4007	4007		34.173	6.2903	1				25718	15175	17294	17304	29404	29404					0.09632084279917308
LAVTTLIVP	9	Unmodified	_LAVTTLIVP_					0	0	0		ENST00000341550.8_1_12:6760514-6761456:-|nuORF	ENST00000341550.8_1_12:6760514-6761456:-|nuORF	ENST00000341550.8_1_12:6760514-6761456:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8003845214844	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3192	3192		18.324	0.95945	1	890090			25719	10249	17295	17305	29405	29405					0.11905003113815837
LAVTTLIVP	9	Unmodified	_LAVTTLIVP_					0	0	0		ENST00000341550.8_1_12:6760514-6761456:-|nuORF	ENST00000341550.8_1_12:6760514-6761456:-|nuORF	ENST00000341550.8_1_12:6760514-6761456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.79913330078125	2	463.799686	925.584819	0.23374	0.00010841	1.7317	0.00080317	1.9655	0.00091158	463.8003055874184	41.421	1.4891	41.495	41.009	42.498	0.073418					84	40	3	0	0	0	0.7932	1	2805	2805		12.207	0	1	378670			25720	10249	17295	17305	29406	29406					0.11905003113815837
LAVTTLIVP	9	Unmodified	_LAVTTLIVP_					0	0	0		ENST00000341550.8_1_12:6760514-6761456:-|nuORF	ENST00000341550.8_1_12:6760514-6761456:-|nuORF	ENST00000341550.8_1_12:6760514-6761456:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7997131347656	2	463.799686	925.584819	-1.9529	-0.00090576	3.5624	0.0016523	1.6095	0.0007465	463.801178460678	42.067	1.8831	42.764	41.947	43.83	0.69754					154	47	4	0	0	0	0.76996	1	3751	3751		33.516	0	1	6253400			25721	10249	17295	17305	29407	29407					0.11905003113815837
LAVTYATT	8	Unmodified	_LAVTYATT_					0	0	0			REV__ENST00000475470.1_1_3:9881841-9882102:-|nuORF	REV__ENST00000475470.1_1_3:9881841-9882102:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22723388671875	2	420.229094	838.443634	0.53933	0.00022664	-3.4769	-0.0014611	-2.9375	-0.0012344	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.884	1	7332	7332		33.516	1.5607	1	678130	+		25722	27099	17296	17306	29408	29408					0.017950047405179248
LAVTYATT	8	Unmodified	_LAVTYATT_					0	0	0			REV__ENST00000475470.1_1_3:9881841-9882102:-|nuORF	REV__ENST00000475470.1_1_3:9881841-9882102:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2274475097656	2	420.229094	838.443634	-1.5729	-0.000661	-1.3827	-0.00058106	-2.9557	-0.0012421	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.884	1	7363	7363		33.516	0	1	634680	+		25723	27099	17296	17306	29409	29409					0.017950047405179248
LAVVAGMLLP	10	Unmodified	_LAVVAGMLLP_					0	0	0		ENST00000361796.9_1_11:57529333-57556559:+|nuORF	ENST00000361796.9_1_11:57529333-57556559:+|nuORF	ENST00000361796.9_1_11:57529333-57556559:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7950744628906	2	492.301539	982.588524	-1.3981	-0.0006883	2.324	0.0011441	0.92592	0.00045583	492.30398581784914	59.265	0.12357	59.265	59.162	59.286	0					6	5	2	0	0	0	0.37624	1	5151	5151		26.796	0	1	22656			25724	10493	17297	17307	29410	29410					0.09653349616019113
LAVVAVLPS	9	Unmodified	_LAVVAVLPS_					0	0	0			REV__ENST00000448867.1_1_X:102001053-102003748:+|nuORF	REV__ENST00000448867.1_1_X:102001053-102003748:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7799987792969	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.67235	1	3429	3429		42.474	0	1	2364100	+		25725	26845	17298	17308	29411	29411					0.10388447425293634
LAVVAVLPS	9	Unmodified	_LAVVAVLPS_					0	0	0			REV__ENST00000448867.1_1_X:102001053-102003748:+|nuORF	REV__ENST00000448867.1_1_X:102001053-102003748:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.77546	1	3446	3446		31.955	2.1133	1	2750200	+		25726	26845	17298	17308	29412	29412					0.10388447425293634
LAVVAVLPS	9	Unmodified	_LAVVAVLPS_					0	0	0			REV__ENST00000448867.1_1_X:102001053-102003748:+|nuORF	REV__ENST00000448867.1_1_X:102001053-102003748:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801208496094	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.76996	1	2108	2108		33.516	0	1	4750000	+		25727	26845	17298	17308	29413	29413					0.10388447425293634
LAVVAVLPS	9	Unmodified	_LAVVAVLPS_					0	0	0			REV__ENST00000448867.1_1_X:102001053-102003748:+|nuORF	REV__ENST00000448867.1_1_X:102001053-102003748:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78021240234375	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.69914	1	2232	2232		40.573	7.057	1	2486400	+		25728	26845	17298	17308	29414	29414					0.10388447425293634
LAVVAVLPS	9	Unmodified	_LAVVAVLPS_					0	0	0			REV__ENST00000448867.1_1_X:102001053-102003748:+|nuORF	REV__ENST00000448867.1_1_X:102001053-102003748:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7788391113281	2	434.778754	867.542954	-0.97799	-0.00042521	2.2819	0.00099211	1.3039	0.0005669	434.7796012796187	43.693	1.006	44.143	43.436	44.442	0.45024					66	24	3	0	0	0	0.78058	1	3916	3916		30.504	3.7075	1	2290300	+		25729	26845	17298	17308	29415	29415					0.10388447425293634
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78533935546875	2	406.783839	811.553125	0.20394	8.2959E-05	3.6434	0.0014821	3.8473	0.001565	406.7851787446003	29.647	1.7935	29.678	29.075	30.869	0.030947					149	52	4	0	0	0	0.81548	2	1485	1485;1492		26.796	1.3459	1	789640	+		25730	17216	17299	17309	29416;29417	29416					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2566833496094	2	406.783839	811.553125	0.11258	4.5796E-05	3.3478	0.0013618	3.4603	0.0014076	406.7851688324923	40.011	0.28259	39.98	39.846	40.129	-0.030991					10	6	2	0	0	0	0.4196	1	2814	2814		44.531	7.5026	1	33964	+		25731	17216	17299	17309	29418	29418					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7852478027344	2	406.783839	811.553125	-0.34246	-0.00013931	4.1924	0.0017054	3.85	0.0015661	406.78540084150717	29.66	1.7951	29.616	28.901	30.696	-0.043095					140	52	4	0	0	0	0.81548	1	1605	1605		20.482	0	1	985720	+		25732	17216	17299	17309	29419	29419					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7852783203125	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.81548	1	1924	1924		20.482	0	1	1953100	+		25733	17216	17299	17309	29420	29420					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78460693359375	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.81724	2	1292	1242;1292		28.254	0	1	1410200	+		25734	17216	17299	17309	29421;29422	29422					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78515625	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.81548	2	1753	1753;1775		28.254	0	1	1756100	+		25735	17216	17299	17309	29423;29424	29423					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7854919433594	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.261	1	31.373	30.873	31.873	0.11198								0	0	0	0.30674	1	1421	1421		15.636	0.97212	1		+		25736	17216	17299	17309	29425	29425					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853088378906	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.322	1	31.434	30.934	31.934	0.11198								0	0	0	0.30784	1	1427	1427		14.664	0	1		+		25737	17216	17299	17309	29426	29426					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853088378906	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.495	1	31.607	31.107	32.107	0.11198								0	0	0	0.30125	1	1447	1447		20.482	1.1219	1		+		25738	17216	17299	17309	29427	29427					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852478027344	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.371	1	32.482	31.982	32.982	0.11117								0	0	0	0.30252	1	1519	1519		19.36	4.6959	1		+		25739	17216	17299	17309	29428	29428					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7851867675781	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.80963	1	1427	1427		15.636	0.97212	1	1817700	+		25740	17216	17299	17309	29429	29429					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7851867675781	2	406.783839	811.553125	0.56827	0.00023116	3.0171	0.0012273	3.5854	0.0014585	406.78493901596437	31.598	1.6437	31.678	30.856	32.5	0.079834					110	37	4	0	0	0	0.86288	1	2221	2221		26.796	0	1	5409400	+		25741	17216	17299	17309	29430	29430					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7853088378906	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.999	1	31.079	30.579	31.579	0.079834								0	0	0	0.31173	1	2067	2067		8.8223	0	1		+		25742	17216	17299	17309	29431	29431					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78521728515625	2	406.783839	811.553125	0.12711	5.1707E-05	3.399	0.0013826	3.5261	0.0014344	406.78513803821613	31.106	0.82648	31.109	30.404	31.23	0.0037212					29	18	2	0	0	0	0.86294	1	2089	2089		8.8223	0	1	2249400	+		25743	17216	17299	17309	29432	29432					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78497314453125	2	406.783839	811.553125	0.94675	0.00038512	2.7522	0.0011195	3.699	0.0015047	406.78484451151587	33.529	1.369	33.798	33.413	34.781	0.26929					111	32	4	0	0	0	0.86288	1	2523	2523		26.796	0	1	7385300	+		25744	17216	17299	17309	29433	29433					0.1398105515053203
LAVVKGLL	8	Unmodified	_LAVVKGLL_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	406.783839	811.553125	-0.48558	-0.00019753	2.9503	0.0012001	2.4647	0.0010026	406.78497362143014	39.912	0.7653	40.28	39.898	40.663	0.36797	0.15001	-6.7862E-05	NaN	44.531	33	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139830	+		25745	17216	17299	17309							0.1398105515053203
LAVVKGQP	8	Unmodified	_LAVVKGQP_					0	0	0			REV__ENSG00000198146|ENST00000356321|ZNF770	REV__ENSG00000198146|ENST00000356321|ZNF770	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2579650878906	2	406.255446	810.496338	0.32239	0.00013097	4.1267	0.0016765	4.4491	0.0018075	406.25699058298386	55.031	2.344	55.122	53.969	56.313	0.091167					99	72	2	0	0	0	0.81548	1	4505	4505		20.482	0	1	315510	+		25746	23303	17300	17310	29434	29434					0.08351007594001203
LAVVKGQP	8	Unmodified	_LAVVKGQP_					0	0	0			REV__ENSG00000198146|ENST00000356321|ZNF770	REV__ENSG00000198146|ENST00000356321|ZNF770	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2574768066406	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.80706	1	3761	3761		19.36	0	1	334920	+		25747	23303	17300	17310	29435	29435					0.08351007594001203
LAVVLALVD	9	Unmodified	_LAVVLALVD_					0	0	0			REV__ENSG00000170385|ENST00000367001|SLC30A1	REV__ENSG00000170385|ENST00000367001|SLC30A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7909851074219	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.76996	1	3455	3455		33.516	1.5607	1	759950	+		25748	21655	17301	17311	29436	29436					0.10984716596749422
LAVVLALVD	9	Unmodified	_LAVVLALVD_					0	0	0			REV__ENSG00000170385|ENST00000367001|SLC30A1	REV__ENSG00000170385|ENST00000367001|SLC30A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7919006347656	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.72402	1	4001	4001		38.806	3.6054	1	186860	+		25749	21655	17301	17311	29437	29437					0.10984716596749422
LAVVLALVD	9	Unmodified	_LAVVLALVD_					0	0	0			REV__ENSG00000170385|ENST00000367001|SLC30A1	REV__ENSG00000170385|ENST00000367001|SLC30A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30029296875	2	456.791861	911.569169	-0.031515	-1.4396E-05	2.6399	0.0012059	2.6083	0.0011915	456.7929208742987	51.14	0.64082	51.138	50.842	51.482	-0.0020447					29	16	2	0	0	0	0.20789	1	4373	4373		10.866	7.1812	1	82457	+		25750	21655	17301	17311	29438	29438					0.10984716596749422
LAVVLALVD	9	Unmodified	_LAVVLALVD_					0	0	0			REV__ENSG00000170385|ENST00000367001|SLC30A1	REV__ENSG00000170385|ENST00000367001|SLC30A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7906799316406	2	456.791861	911.569169	-1.3117	-0.00059915	2.7647	0.0012629	1.4531	0.00066375	456.79301301178594	40.135	1.4029	40.092	39.45	40.853	-0.043697					111	34	4	0	0	0	0.77546	1	2959	2959		31.955	5.1588	1	1093900	+		25751	21655	17301	17311	29439	29439					0.10984716596749422
LAVVLALVD	9	Unmodified	_LAVVLALVD_					0	0	0			REV__ENSG00000170385|ENST00000367001|SLC30A1	REV__ENSG00000170385|ENST00000367001|SLC30A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79107666015625	2	456.791861	911.569169	0.23747	0.00010847	2.1705	0.00099146	2.408	0.0010999	456.79269786067573	42.365	2.4539	42.43	41.781	44.235	0.065037					168	63	3	0	0	0	0.7932	1	2800	2800		24.203	4.8428	1	556840	+		25752	21655	17301	17311	29440	29440					0.10984716596749422
LAVVLALVD	9	Unmodified	_LAVVLALVD_					0	0	0			REV__ENSG00000170385|ENST00000367001|SLC30A1	REV__ENSG00000170385|ENST00000367001|SLC30A1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	456.791861	911.569169	-1.228	-0.00056095	4.253	0.0019427	3.0249	0.0013818	456.79363047103436	51.428	0.74678	51.463	51.047	51.794	0.034584	0.22207	0.00089801	NaN	10.866	31	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123350	+		25753	21655	17301	17311							0.10984716596749422
LAVVPGVAL	9	Unmodified	_LAVVPGVAL_					0	0	0		ENST00000374217.6_1_1:26629387-26644678:-|nuORF	ENST00000374217.6_1_1:26629387-26644678:-|nuORF	ENST00000374217.6_1_1:26629387-26644678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7752990722656	2	419.773471	837.53239	2.1505	0.00090274	1.8895	0.00079317	4.0401	0.0016959	419.7740299078456	46.251	0.82218	46.247	45.663	46.485	-0.0041618					28	19	2	0	0	0	0.78292	1	3721	3721		29.842	0	1	69786			25754	10769	17302	17312	29441	29441					0.10712464770847419
LAVVPGVAL	9	Unmodified	_LAVVPGVAL_					0	0	0		ENST00000374217.6_1_1:26629387-26644678:-|nuORF	ENST00000374217.6_1_1:26629387-26644678:-|nuORF	ENST00000374217.6_1_1:26629387-26644678:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	419.773471	837.53239	-1.7877	-0.00075043	6.2146	0.0026087	4.4269	0.0018583	419.775667376575	46.256	1.4938	46.256	45.779	47.273	0	0.049287	0.0011999	NaN	29.842	61	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101160			25755	10769	17302	17312							0.10712464770847419
LAVVPGVAL	9	Unmodified	_LAVVPGVAL_					0	0	0		ENST00000374217.6_1_1:26629387-26644678:-|nuORF	ENST00000374217.6_1_1:26629387-26644678:-|nuORF	ENST00000374217.6_1_1:26629387-26644678:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	419.773471	837.53239	0.085584	3.5926E-05	4.4177	0.0018545	4.5033	0.0018904	419.7749053140654	46.087	0.74345	46.069	45.787	46.53	-0.018585	-0.13755	-0.00030862	NaN	29.842	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51195			25756	10769	17302	17312							0.10712464770847419
LAVVPGVAL	9	Unmodified	_LAVVPGVAL_					0	0	0		ENST00000374217.6_1_1:26629387-26644678:-|nuORF	ENST00000374217.6_1_1:26629387-26644678:-|nuORF	ENST00000374217.6_1_1:26629387-26644678:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	419.773471	837.53239	-1.8572	-0.00077959	6.2602	0.0026279	4.4031	0.0018483	419.7757770507712	46.189	1.4089	46.205	45.791	47.2	0.015514	-0.0019253	0.0012382	NaN	29.842	61	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87554			25757	10769	17302	17312							0.10712464770847419
LAVVPGVAL	9	Unmodified	_LAVVPGVAL_					0	0	0		ENST00000374217.6_1_1:26629387-26644678:-|nuORF	ENST00000374217.6_1_1:26629387-26644678:-|nuORF	ENST00000374217.6_1_1:26629387-26644678:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	419.773471	837.53239	-0.39835	-0.00016722	5.0955	0.002139	4.6971	0.0019717	419.7751633796318	46.335	0.67822	46.256	45.759	46.438	-0.079006	0.049653	0.00026039	NaN	29.842	25	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69564			25758	10769	17302	17312							0.10712464770847419
LAVVPSKR	8	Unmodified	_LAVVPSKR_					0	0	0		ENSG00000277058|ENST00000617807|HNRNPCL3;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000179172|ENST00000317869|HNRNPCL1	ENSG00000277058|ENST00000617807|HNRNPCL3	ENSG00000277058|ENST00000617807|HNRNPCL3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2819519042969	2	435.281995	868.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.402	1	67.529	67.029	68.029	0.12748								0	0	0	0.29978	1	6023	6023		21.96	1.013	1				25759	7253	17303	17313	29442	29442					0.10990385376669565
LAVVREGRS	9	Unmodified	_LAVVREGRS_					0	0	0		ENSG00000064687|ENST00000263094|ABCA7;nc|ENSG00000064687|Q8IZY2-2|ABCA7;ENST00000525939.1_1_19:1062261-1063875:+|nuORF	ENSG00000064687|ENST00000263094|ABCA7	ENSG00000064687|ENST00000263094|ABCA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.791748046875	2	493.790715	985.566878	0.7511	0.00037088	1.943	0.00095941	2.6941	0.0013303	493.7915393325102	91.749	1.815	92.199	91.714	93.529	0.44958					108	42	4	0	0	0	0.78536	1	10947	10947		29.15	2.3535	1	2387900			25760	1108	17304	17314	29443	29443					0.07351680911676794
LAVVRVTEDRG	11	Unmodified	_LAVVRVTEDRG_					0	0	0			REV__nc|ENSG00000159840|Q15942-2|ZYX	REV__nc|ENSG00000159840|Q15942-2|ZYX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5661926269531	3	405.566571	1213.67788	-1.8662	-0.00075687	-2.6627	-0.0010799	-4.5289	-0.0018368	405.5653987385133	59.885	1.7634	59.979	59.006	60.769	0.094059					140	62	3	0	0	0	0.74771	1	5070	5070		22.562	3.2989	1	349460	+		25761	20684	17305	17315	29444	29444					0.0795927582908007
LAVVVLLALP	10	Unmodified	_LAVVVLLALP_					0	0	0		nc|ENSG00000203710|P17927|CR1;ENSG00000203710|ENST00000367049|CR1;ENST00000530487.5_1_1:207669597-207680159:+|nuORF;ENST00000436595.1_1_1:207669690-207743292:+|nuORF;ENST00000434033.5_1_1:207669690-207707642:+|nuORF;ENST00000367050.8_1_1:207669597-207732429:+|nuORF	nc|ENSG00000203710|P17927|CR1	nc|ENSG00000203710|P17927|CR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34796142578125	2	504.346803	1006.67905	0.33922	0.00017108	2.4867	0.0012542	2.8259	0.0014252	504.34787681468055	34.758	1.3281	34.968	34.604	35.932	0.21002					94	33	4	0	0	0	0.87636	1	2639	2639		12.959	0.75233	1	1680800			25762	8390	17306	17316	29445	29445					0.17598141935934564
LAWFALGVYLL	11	Unmodified	_LAWFALGVYLL_					0	0	0			REV__ENSG00000130943|ENST00000253255|PKDREJ	REV__ENSG00000130943|ENST00000253255|PKDREJ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3684692382812	2	633.368267	1264.72198	1.4675	0.00092945	-0.20544	-0.00013012	1.262	0.00079933	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.72739	1	9827	9827		17.365	0	1	5460600	+		25763	18922	17307	17317	29446	29446					0.10020911993387926
LAWLPLGA	8	Unmodified	_LAWLPLGA_					0	0	0			REV__ENSG00000178732|ENST00000692618|GP5	REV__ENSG00000178732|ENST00000692618|GP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.7552795410156	2	420.752539	839.490525	2.8224	0.0011875	3.6252	0.0015253	6.4476	0.0027129	420.75391516461383	21.105	1.6401	21.041	20.066	21.706	-0.064058					103	72	2	0	0	0	0.80127	1	552	552		16.705	0	1	85377	+		25764	22292	17308	17318	29447	29447					0.06435909082335911
LAWLTHTEG	9	Unmodified	_LAWLTHTEG_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.2647094726562	2	514.263999	1026.51345	0.67038	0.00034475	-0.65869	-0.00033874	0.011686	6.0099E-06	514.2634451970073	50.239	0.78304	50.686	50.348	51.131	0.44761					49	18	4	0	0	0	0.35373	1	4931	4931		60.972	2.19	1	1926100			25765	5149	17309	17319	29448	29448					0.0012488340912568674
LAWNWELSD	9	Unmodified	_LAWNWELSD_					0	0	0			REV__nc|ENSG00000093072|Q9NZK5-2|ADA2	REV__nc|ENSG00000093072|Q9NZK5-2|ADA2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.329833984375	2	567.266739	1132.51892	-1.2066	-0.00068444	-2.1949	-0.0012451	-3.4014	-0.0019295	567.2644978197461	92.793	0.21462	92.863	92.756	92.97	0.06987					6	4	2	0	0	0	0.20789	1	9609	9609		44.117	14.947	1	27405	+		25766	29728	17310	17320	29449	29449					-0.042034377990376015
LAWRKYKVN	9	Unmodified	_LAWRKYKVN_					0	0	0			REV__nc|ENSG00000128607|Q6PID8-2|KLHDC10	REV__nc|ENSG00000128607|Q6PID8-2|KLHDC10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.34326171875	2	589.345658	1176.67676	-0.40075	-0.00023618	-4.2062	-0.0024789	-4.607	-0.0027151	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.78536	1	9170	9170		29.15	4.6304	1	4112500	+		25767	18784	17311	17321	29450	29450					0.09549106250847217
LAWRKYKVN	9	Unmodified	_LAWRKYKVN_					0	0	0			REV__nc|ENSG00000128607|Q6PID8-2|KLHDC10	REV__nc|ENSG00000128607|Q6PID8-2|KLHDC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3427124023438	2	589.345658	1176.67676	-0.63667	-0.00037522	-3.5315	-0.0020813	-4.1681	-0.0024565	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.78536	2	11019	11019;11092		29.15	1.0681	1	2236100	+		25768	18784	17311	17321	29451;29452	29451					0.09549106250847217
LAWVFELLAKG	11	Unmodified	_LAWVFELLAKG_					0	0	0			REV__ENSG00000100726|ENST00000262319|TELO2	REV__ENSG00000100726|ENST00000262319|TELO2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.2845153808594	3	416.244658	1245.71214	2.0169	0.00083951	-3.3882	-0.0014103	-1.3713	-0.00057079	416.24337075990064	24.683	0.70977	24.17	23.835	24.544	-0.51365					38	15	4	0	0	0	0.17334	1	1250	1250		34.087	0	1	129220	+		25769	17216	17312	17322	29453	29453					0.09911723987988807
LAWVVWALL	9	Unmodified	_LAWVVWALL_					0	0	0			REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.3062133789062	2	535.823495	1069.63244	0.19079	0.00010223	-2.6526	-0.0014213	-2.4618	-0.0013191	535.8218670686235	51.634	0.70129	52.302	51.895	52.596	0.6673					21	16	2	0	0	0	0.20789	1	5103	5103		21.702	5.2292	1	228120	+		25770	24071	17313	17323	29454	29454					0.10040702104652155
LAWVVWALL	9	Unmodified	_LAWVVWALL_					0	0	0			REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	535.823495	1069.63244	-0.0023638	-1.2666E-06	-2.3474	-0.0012578	-2.3498	-0.0012591	535.8220828670054	51.995	1.5662	51.993	51.307	52.874	-0.0020447	-0.15301	-0.00022847	NaN	29.842	81	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206010	+		25771	24071	17313	17323							0.10040702104652155
LAWVVWALL	9	Unmodified	_LAWVVWALL_					0	0	0			REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	535.823495	1069.63244	0.034147	1.8297E-05	-2.4416	-0.0013082	-2.4074	-0.0012899	535.8219873800386	51.896	1.6435	51.872	51.486	53.129	-0.02343	-0.27394	-0.00032932	NaN	29.842	64	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189150	+		25772	24071	17313	17323							0.10040702104652155
LAWVVWALL	9	Unmodified	_LAWVVWALL_					0	0	0			REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	535.823495	1069.63244	0.29148	0.00015618	-2.7048	-0.0014493	-2.4133	-0.0012931	535.8218683391867	51.978	1.5424	51.99	51.354	52.896	0.012436	-0.1561	-0.0006114	NaN	29.842	78	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	268750	+		25773	24071	17313	17323							0.10040702104652155
LAWVVWALL	9	Unmodified	_LAWVVWALL_					0	0	0			REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	535.823495	1069.63244	-0.056257	-3.0144E-05	-2.2561	-0.0012089	-2.3124	-0.001239	535.822208168374	52.049	1.2225	52.089	51.517	52.74	0.040592	-0.056837	-0.00013062	NaN	29.842	84	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	232040	+		25774	24071	17313	17323							0.10040702104652155
LAWVVWALL	9	Unmodified	_LAWVVWALL_					0	0	0			REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	535.823495	1069.63244	-0.22214	-0.00011903	-2.1426	-0.001148	-2.3647	-0.0012671	535.8222467668593	52.123	1.1674	52.048	51.481	52.648	-0.074509	-0.097901	-8.8941E-06	NaN	29.842	78	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	321840	+		25775	24071	17313	17323							0.10040702104652155
LAWVVWALL	9	Unmodified	_LAWVVWALL_					0	0	0			REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	REV__ENST00000064780.6_1_11:73087457-73102263:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	535.823495	1069.63244	-0.13149	-7.0454E-05	-2.6001	-0.0013932	-2.7316	-0.0014636	536.3234102928557	52.018	0.5443	52.442	51.936	52.481	0.42348	0.29538	-0.00049922	NaN	29.842	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	311070	+		25776	24071	17313	17323							0.10040702104652155
LAYLLDLLG	9	Unmodified	_LAYLLDLLG_					0	0	0		ENST00000345057.8_1_16:67188417-67189138:-|nuORF	ENST00000345057.8_1_16:67188417-67189138:-|nuORF	ENST00000345057.8_1_16:67188417-67189138:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	495.8138732910156	2	495.797143	989.579734	0.7345	0.00036416	0.10218	5.0659E-05	0.83668	0.00041482	495.7980565381258	21.58	0.067757	21.564	21.538	21.606	-0.016428					4	2	2	0	0	0	0.20789	1	597	597		20.482	0	1	12220			25777	10300	17314	17324	29455	29455					0.08452699251188278
LAYSTPVPL	9	Unmodified	_LAYSTPVPL_					0	0	0			REV__nc|ENSG00000188162|Q6ZRI0|OTOG	REV__nc|ENSG00000188162|Q6ZRI0|OTOG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.7707214355469	2	480.773668	959.532783	-0.0039102	-1.8799E-06	-4.1901	-0.0020145	-4.194	-0.0020164	480.77150529803663	40.928	0.46882	40.882	40.674	41.143	-0.045471					33	18	2	0	0	0	0.67235	1	2633	2633		42.474	0.078325	1	279370	+		25778	22983	17315	17325	29456	29456					0.05139839700041193
LAYYPQIR	8	Unmodified	_LAYYPQIR_					0	0	0			REV__nc|ENSG00000157540|Q13627-4|DYRK1A	REV__nc|ENSG00000157540|Q13627-4|DYRK1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2822265625	2	512.284734	1022.55492	0.037195	1.9054E-05	-3.127	-0.0016019	-3.0898	-0.0015829	512.2826017379747	34.059	0.51579	34.055	33.818	34.334	-0.0047417					23	11	3	0	0	0	0.86288	1	2033	2033		26.796	1.3459	1	49852	+		25779	20549	17316	17326	29457	29457					0.04454064168464811
LCAGWPWLS	9	Unmodified	_LCAGWPWLS_					0	0	0			REV__ENSG00000027644|ENST00000368195|INSRR	REV__ENSG00000027644|ENST00000368195|INSRR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.751708984375	2	516.752213	1031.48987	-0.39148	-0.0002023	-1.1915	-0.00061572	-1.583	-0.00081802	516.7512381564939	28.723	0.51648	28.694	28.481	28.997	-0.029207					22	11	3	0	0	0	0.67235	1	1769	1769		42.474	0	1	102300	+		25780	16264	17317	17327	29458	29458					-0.024612536290305798
LCAHQPLLGPW	11	Unmodified	_LCAHQPLLGPW_					0	0	0		ENSG00000155970|ENST00000318063|MICU3	ENSG00000155970|ENST00000318063|MICU3	ENSG00000155970|ENST00000318063|MICU3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	617.8244018554688	2	617.823701	1233.63285	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.49	1	16.41	15.91	16.91	-0.080017								0	0	0	0.56276	1	121	121		26.693	0	1				25781	5355	17318	17328	29459	29459					0.02537753762203465
LCAPLGVK	8	Unmodified	_LCAPLGVK_					0	0	0			REV__ENST00000527653.1_1_8:145139038-145139470:+|nuORF	REV__ENST00000527653.1_1_8:145139038-145139470:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2225036621094	2	400.738574	799.462595	0.51505	0.0002064	-3.1849	-0.0012763	-2.6699	-0.0010699	400.737321138748	31.196	0.52519	31.275	30.989	31.514	0.079834					13	11	2	0	0	0	0.4196	1	2057	2057		8.8223	0.59103	1	52994	+		25782	28231	17319	17329	29460	29460					0.054842628305891594
LCAPLGVK	8	Unmodified	_LCAPLGVK_					0	0	0			REV__ENST00000527653.1_1_8:145139038-145139470:+|nuORF	REV__ENST00000527653.1_1_8:145139038-145139470:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	400.738574	799.462595	-2.0143	-0.00080719	-0.09668	-3.8743E-05	-2.1109	-0.00084593	400.73822873525455	30.903	0.44164	30.903	30.674	31.116	0	-0.098498	0.0014174	NaN	8.8223	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28034	+		25783	28231	17319	17329							0.054842628305891594
LCAPLGVK	8	Unmodified	_LCAPLGVK_					0	0	0			REV__ENST00000527653.1_1_8:145139038-145139470:+|nuORF	REV__ENST00000527653.1_1_8:145139038-145139470:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	400.738574	799.462595	-0.33526	-0.00013435	-1.1215	-0.00044941	-1.4567	-0.00058376	400.73723966876156	30.961	0.51344	30.913	30.661	31.175	-0.047062	-0.087761	0.00059603	NaN	8.8223	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9563.7	+		25784	28231	17319	17329							0.054842628305891594
LCAPLGVK	8	Unmodified	_LCAPLGVK_					0	0	0			REV__ENST00000527653.1_1_8:145139038-145139470:+|nuORF	REV__ENST00000527653.1_1_8:145139038-145139470:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	400.738574	799.462595	-1.9194	-0.00076916	-0.85393	-0.0003422	-2.7733	-0.0011114	400.7379353888675	30.85	0.44085	30.913	30.783	31.224	0.063122	-0.087879	0.00081045	NaN	8.8223	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55307	+		25785	28231	17319	17329							0.054842628305891594
LCAPPWPH	8	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))APPWPH_	LC(1)APPWPH		LC(44)APPWPH		0	1	0			REV__ENST00000414722.5_1_10:119806017-119811679:+|nuORF	REV__ENST00000414722.5_1_10:119806017-119811679:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.2367858886719	2	489.23673	976.458907	-0.72549	-0.00035494	0.099144	4.8505E-05	-0.62635	-0.00030643	489.23682827265793	62.903	2.2218	63.017	62.721	64.943	0.11388					298	98	5	0	0	0	0.91333	1	5497	5497		43.626	13.122	1	3506900	+		25786	26410	17320	17330	29461	29461	322				-0.03026406943274651
LCAWPRSA	8	Unmodified	_LCAWPRSA_					0	0	0			REV__ENST00000356166.10_3_16:30681089-30681491:+|nuORF	REV__ENST00000356166.10_3_16:30681089-30681491:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2282409667969	2	452.228905	902.443257	1.1697	0.00052896	-3.091	-0.0013978	-1.9213	-0.00086888	452.22766943283847	107.06	0.98818	107.17	106.77	107.76	0.10396					98	37	5	0	0	0	0.89962	1	13022	13022		38.806	3.6054	1	2682300	+		25787	25386	17321	17331	29462	29462					-0.011866934603290247
LCCCASSC	8	4 Carbamidomethyl (C)	_LC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))ASSC(Carbamidomethyl (C))_	LC(1)C(1)C(1)ASSC(1)		LC(52)C(52)C(52)ASSC(52)		0	4	0			REV__ENST00000529076.1_1_11:102960023-102962823:-|nuORF	REV__ENST00000529076.1_1_11:102960023-102962823:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.1684265136719	2	509.166473	1016.31839	0.48895	0.00024895	3.1102	0.0015836	3.5991	0.0018326	509.16807979648974	53.045	1.3729	53.659	53.2	54.573	0.61436					92	32	4	0	0	0	0.93529	1	5353	5353		52.299	14.488	1	2981900	+		25788	28260	17322	17332	29463	29463	343;344;345;346				-0.18911438045677187
LCCKPLQLY	9	Unmodified	_LCCKPLQLY_					0	0	0			REV__chr19:54011820-54011951|17|12.47|0.34|5.2|+|0|TE_info:L2c,L2c_dup131469,L2,LINE,donor,+,54011755,54011820|None,CACNG6|1	REV__chr19:54011820-54011951|17|12.47|0.34|5.2|+|0|TE_info:L2c,L2c_dup131469,L2,LINE,donor,+,54011755,54011820|None,CACNG6|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.7825927734375	2	540.782656	1079.55076	-0.2214	-0.00011973	-1.1827	-0.00063959	-1.4041	-0.00075932	540.7819318864873	60.029	0.56477	60.015	59.789	60.354	-0.013729					37	14	3	0	0	0	0.72402	1	5549	5549		38.806	1.647	1	212540	+		25789	15721	17323	17333	29464	29464					0.01416515358914694
LCCNKVQNYSM	11	2 Carbamidomethyl (C),Oxidation (M)	_LC(Carbamidomethyl (C))C(Carbamidomethyl (C))NKVQNYSM(Oxidation (M))_	LC(1)C(1)NKVQNYSM	LCCNKVQNYSM(1)	LC(59)C(59)NKVQNYSM	LCCNKVQNYSM(59)	0	2	1		ENSG00000204479|ENST00000376098|PRAMEF17	ENSG00000204479|ENST00000376098|PRAMEF17	ENSG00000204479|ENST00000376098|PRAMEF17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.20440673828125	3	478.20544	1431.59449	-0.48623	-0.00023252	-3.2552	-0.0015566	-3.7414	-0.0017892	478.2043529521045	30.618	0.79631	30.646	30.362	31.158	0.028618					67	17	6	0	0	0	0.40952	3	2024	2001;2012;2024		58.63	19.916	1	891480			25790	8448	17324	17334	29465;29466;29467	29467	102;103	146			-0.10404287996948369
LCDTSQSLREN	11	Unmodified	_LCDTSQSLREN_					0	0	0		nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1;ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1	nc|ENSG00000173230|Q14789-4|GOLGB1	nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5304870605469	3	422.531198	1264.57176	0.91272	0.00038565	-2.3533	-0.00099434	-1.4406	-0.00060869	422.53018599321956	17.931	0.25888	18.007	17.867	18.125	0.075443					14	7	3	0	0	0	0.69687	1	225	225		32.034	2.4834	1	33343			25791	6843	17325	17335	29468	29468					-0.04993847798527895
LCDVHFLV	8	Unmodified	_LCDVHFLV_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.2475280761719	2	473.246763	944.478974	-0.51455	-0.00024351	3.1885	0.0015089	2.6739	0.0012654	473.24818540235697	28.981	1.8023	28.961	28.523	30.325	-0.019407					101	54	4	0	0	0	0.88915	1	1511	1511		35.201	4.6971	1	574970			25792	3867	17326	17336	29469	29469					0.004513439966899568
LCEEGQDWQQ	10	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))EEGQDWQQ_	LC(1)EEGQDWQQ		LC(45)EEGQDWQQ		0	1	0		nc|ENSG00000041515|Q9Y6X6|MYO16;ENSG00000041515|ENST00000457511|MYO16	nc|ENSG00000041515|Q9Y6X6|MYO16	nc|ENSG00000041515|Q9Y6X6|MYO16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.5130310058594	3	431.511915	1291.51392	0.69549	0.00030011	1.9611	0.00084625	2.6566	0.0011464	431.5128002971517	22.321	1.5866	21.902	21.305	22.891	-0.41879					89	36	4	0	0	0	0.69342	1	886	886		45.022	8.7046	1	1830900			25793	932	17327	17337	29470	29470	11				-0.12018109723976522
LCEKNHWW	8	Unmodified	_LCEKNHWW_					0	0	0		nc|ENSG00000164796|Q7Z407-5|CSMD3;nc|ENSG00000164796|Q7Z407-3|CSMD3;nc|ENSG00000164796|Q7Z407-4|CSMD3;nc|ENSG00000164796|Q7Z407-2|CSMD3;ENSG00000164796|ENST00000297405|CSMD3	nc|ENSG00000164796|Q7Z407-5|CSMD3	nc|ENSG00000164796|Q7Z407-5|CSMD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.2578125	2	558.258194	1114.50183	0.48192	0.00026903	1.6232	0.00090617	2.1051	0.0011752	558.2589699137421	46.954	0.78132	46.95	46.68	47.461	-0.0041618					48	19	3	0	0	0	0.92973	1	3874	3874		50.025	11.218	1	1051900			25794	6004	17328	17338	29471	29471					-0.050836368858426795
LCEKRKRRRER	11	Unmodified	_LCEKRKRRRER_					0	0	0		ENST00000280571.9_1_12:123920858-123920954:-|nuORF	ENST00000280571.9_1_12:123920858-123920954:-|nuORF	ENST00000280571.9_1_12:123920858-123920954:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	510.6342468261719	3	510.635437	1528.88448	-0.66182	-0.00033795	-1.6111	-0.00082271	-2.273	-0.0011607	510.63445456092177	103.9	1.2109	103.9	103.18	104.39	0					61	29	3	0	0	0	0.81021	1	10713	10713		9.2118	0	1	568590			25795	9619	17329	17339	29472	29472					0.14119365176406973
LCEKRKRRRER	11	Unmodified	_LCEKRKRRRER_					0	0	0		ENST00000280571.9_1_12:123920858-123920954:-|nuORF	ENST00000280571.9_1_12:123920858-123920954:-|nuORF	ENST00000280571.9_1_12:123920858-123920954:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.6347961425781	3	510.635437	1528.88448	4.1352	0.0021116	-4.4188	-0.0022564	-0.28362	-0.00014482	510.96644639342924	104.18	2.2061	104.41	103.8	106.01	0.22783					165	53	5	0	0	0	0.81407	1	12770	12770		8.4073	2.4062	1	454800			25796	9619	17329	17339	29473	29473					0.14119365176406973
LCFCATLPLT	10	Carbamidomethyl (C)	_LCFC(Carbamidomethyl (C))ATLPLT_	LCFC(1)ATLPLT		LC(-69)FC(69)ATLPLT		0	1	0			REV__ENST00000505061.5_1_15:42111671-42117631:+|nuORF	REV__ENST00000505061.5_1_15:42111671-42117631:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.7844848632812	2	569.785395	1137.55624	0.62382	0.00035545	-1.5478	-0.00088191	-0.92398	-0.00052647	569.7843921471242	54.967	0.79696	55.535	55.236	56.033	0.56836					41	18	3	0	0	0	0.065923	1	5624	5624		106.42	7.8332	2	2242700	+		25797	27873	17330	17340	29474	29474	340				-0.007038058492980781
LCFIPWIHSK	10	Unmodified	_LCFIPWIHSK_					0	0	0		ENSG00000112394|ENST00000368851|SLC16A10	ENSG00000112394|ENST00000368851|SLC16A10	ENSG00000112394|ENST00000368851|SLC16A10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3367309570312	2	622.336444	1242.65834	2.9643	0.0018448	-3.0465	-0.0018959	-0.082152	-5.1126E-05	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.8486	1	12360	12360		3.6843	0	1	435720			25798	2662	17331	17341	29475	29475					0.046712282846101516
LCFLRGRPLLR	11	Unmodified	_LCFLRGRPLLR_					0	0	0			REV__ENST00000403000.6_1_8:145689231-145689483:-|nuORF	REV__ENST00000403000.6_1_8:145689231-145689483:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.6096496582031	3	448.607936	1342.80198	-1.3124	-0.00058875	4.4717	0.0020061	3.1593	0.0014173	448.6097327049683	74.956	1.1468	75.082	74.623	75.77	0.12545					89	30	4	0	0	0	0.78391	1	6935	6935		14.694	2.487	1	427440	+		25799	26271	17332	17342	29476	29476					0.14429075115572232
LCFRLWEV	8	Unmodified	_LCFRLWEV_					0	0	0			REV__ENSG00000144031|ENST00000360589|ANKRD53	REV__ENSG00000144031|ENST00000360589|ANKRD53	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.1713256835938	2	533.281137	1064.54772	-1.4739	-0.00078598	2.1012	0.0011205	0.62734	0.00033455	533.2821886664232	39.875	0.93437	40.465	39.825	40.759	0.58915					30	21	2	0	0	0	0.4196	1	3412	3412		18.324	0	1	145740	+		25800	19866	17333	17343	29477	29477					0.018030082964060057
LCGLLASR	8	Unmodified	_LCGLLASR_					0	0	0		ENSG00000197140|ENST00000379907|ADAM32	ENSG00000197140|ENST00000379907|ADAM32	ENSG00000197140|ENST00000379907|ADAM32	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.7371520996094	2	416.739105	831.463658	0.14193	5.9149E-05	-4.4337	-0.0018477	-4.2917	-0.0017885	416.73684580104924	35.114	0.41824	35.22	34.989	35.407	0.10604					33	13	4	0	0	0	0.83466	1	1829	1829		23.037	1.3344	1	508040			25801	8139	17334	17344	29478	29478					0.04118477199494919
LCGQKIIV	8	Unmodified	_LCGQKIIV_					0	0	0			REV__ENSG00000115956|ENST00000234313|PLEK	REV__ENSG00000115956|ENST00000234313|PLEK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26690673828125	2	437.264956	872.515359	0.61137	0.00026733	1.1908	0.00052067	1.8021	0.00078801	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.86288	1	989	989		26.796	0	1	1313200	+		25802	18163	17335	17345	29479	29479					0.07400220893396181
LCGRRGGS	8	Unmodified	_LCGRRGGS_					0	0	0		chr19:42302325-42302522|39|33.44|0.18|7.51|-|2|PAFAH1B3,None|1	chr19:42302325-42302522|39|33.44|0.18|7.51|-|2|PAFAH1B3,None|1	chr19:42302325-42302522|39|33.44|0.18|7.51|-|2|PAFAH1B3,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.20928955078125	2	403.208504	804.402455	0.85516	0.00034481	0.40187	0.00016204	1.257	0.00050685	403.2085877273137	85.891	2.1457	85.817	85.277	87.423	-0.073761					115	49	4	0	0	0	0.884	2	8856	8856;8869		33.516	0	1	1526100			25803	277	17336	17346	29480;29481	29480					-0.007570347799287447
LCGVCAQSLL	10	Unmodified	_LCGVCAQSLL_					0	0	0			REV__ENSG00000167077|ENST00000401548|MEI1	REV__ENSG00000167077|ENST00000401548|MEI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.75604248046875	2	503.756638	1005.49872	0.86048	0.00043347	-2.0408	-0.0010281	-1.1803	-0.00059458	503.755421314307	31.348	0.77067	31.352	30.971	31.742	0.0037212					36	17	3	0	0	0	0.46422	1	2133	2133		58.782	0.97068	1	531440	+		25804	21349	17337	17347	29482	29482					-0.003806480548746549
LCGVRVAVPI	10	Unmodified	_LCGVRVAVPI_					0	0	0			REV__nc|ENSG00000122507|Q3SYG4-5|BBS9	REV__nc|ENSG00000122507|Q3SYG4-5|BBS9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8089599609375	2	513.810062	1025.60557	0.14837	7.6233E-05	-2.2121	-0.0011366	-2.0637	-0.0010603	513.8088134492856	48.067	1.4161	48.057	47.714	49.13	-0.0093269					122	36	4	0	0	0	0.84112	2	3952	3952;4010		37.159	12.956	1	1557500	+		25805	18500	17338	17348	29483;29484	29483					0.09379270221802471
LCGVRVAVPI	10	Unmodified	_LCGVRVAVPI_					0	0	0			REV__nc|ENSG00000122507|Q3SYG4-5|BBS9	REV__nc|ENSG00000122507|Q3SYG4-5|BBS9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8085327148438	2	513.810062	1025.60557	-0.12671	-6.5103E-05	-1.9623	-0.0010083	-2.089	-0.0010734	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.86452	1	4083	4083		30.504	1.3541	1	1731500	+		25806	18500	17338	17348	29485	29485					0.09379270221802471
LCGVRVAVPI	10	Unmodified	_LCGVRVAVPI_					0	0	0			REV__nc|ENSG00000122507|Q3SYG4-5|BBS9	REV__nc|ENSG00000122507|Q3SYG4-5|BBS9	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.808837890625	2	513.810062	1025.60557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.87	1	46.766	46.266	47.266	0.89542								0	0	0	0.45132	1	4305	4305		29.15	1.2673	1		+		25807	18500	17338	17348	29486	29486					0.09379270221802471
LCHGELHGA	9	Unmodified	_LCHGELHGA_					0	0	0			REV__ENST00000565131.5_1_15:76196304-76197948:+|nuORF	REV__ENST00000565131.5_1_15:76196304-76197948:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7231140136719	2	468.721444	935.428335	-0.013184	-6.1798E-06	3.638	0.0017052	3.6249	0.001699	468.7232380662735	77.148	2.5429	77.547	77.268	79.811	0.3997					145	61	5	0	0	0	0.72402	1	8874	8874		38.806	0.99462	1	15095000	+		25808	21365	17339	17349	29487	29487					-0.04196185328305546
LCHPRNSCS	9	Unmodified	_LCHPRNSCS_					0	0	0			REV__ENSG00000145777|ENST00000344895|TSLP	REV__ENSG00000145777|ENST00000344895|TSLP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.7251281738281	2	508.723661	1015.43277	-0.062057	-3.157E-05	3.3472	0.0017028	3.2851	0.0016712	508.7251418634259	31.95	0.71365	31.899	31.567	32.281	-0.051031					35	15	3	0	0	0	0.78058	1	1858	1858		30.504	1.3541	1	216630	+		25809	19966	17340	17350	29488	29488					-0.07433044177059855
LCHSSTQLL	9	Unmodified	_LCHSSTQLL_					0	0	0		ENST00000562866.1_1_16:89783858-89784437:+|nuORF	ENST00000562866.1_1_16:89783858-89784437:+|nuORF	ENST00000562866.1_1_16:89783858-89784437:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2569274902344	2	501.257859	1000.50117	-1.4721	-0.00073792	-0.65407	-0.00032786	-2.1262	-0.0010658	501.25746640332557	72.811	0.74078	73.197	72.834	73.575	0.38582					47	17	3	0	0	0	0.7932	1	8169	8169		26.693	1.1189	1	682560			25810	13856	17341	17351	29489	29489					0.0009352367445671916
LCIEGQNAFS	10	Unmodified	_LCIEGQNAFS_					0	0	0			REV__nc|ENSG00000118514|Q9H2A2-4|ALDH8A1	REV__nc|ENSG00000118514|Q9H2A2-4|ALDH8A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.251220703125	2	541.252774	1080.491	-0.13901	-7.524E-05	-3.0953	-0.0016753	-3.2343	-0.0017506	541.2509770370538	51.742	0.72044	51.74	51.395	52.115	-0.0020447					31	16	3	0	0	0	0.026937	1	4430	4430		116.9	3.492	1	328810	+		25811	18318	17342	17352	29490	29490					-0.0460308405079104
LCILFGVPL	9	Unmodified	_LCILFGVPL_					0	0	0			REV__ENST00000336967.7_1_19:54377816-54378302:+|nuORF	REV__ENST00000336967.7_1_19:54377816-54378302:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7906494140625	2	487.790807	973.56706	-1.5393	-0.00075085	1.1332	0.00055277	-0.40607	-0.00019808	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.72098	1	8020	8020		39.021	7.0666	1	1760400	+		25812	25198	17343	17353	29491	29491					0.07921964587308139
LCINERLA	8	Unmodified	_LCINERLA_					0	0	0			REV__nc|ENSG00000108219|Q8NG11-2|TSPAN14	REV__nc|ENSG00000108219|Q8NG11-2|TSPAN14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.255126953125	2	466.25512	930.495686	0.14963	6.9764E-05	-3.1762	-0.0014809	-3.0265	-0.0014111	466.2534991696802	60.959	1.2686	60.926	59.804	61.072	-0.032509					71	38	2	0	0	0	0.89043	1	5738	5738		35.618	2.8059	1	239520	+		25813	17699	17344	17354	29492	29492					0.027658448826286985
LCKCGASGG	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LCKCGASGG_					1	0	0			REV__ENST00000547035.5_1_12:53887565-53887598:-|nuORF	REV__ENST00000547035.5_1_12:53887565-53887598:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1815490722656	2	419.183306	836.352059	1.9633	0.00082297	1.4836	0.00062188	3.4468	0.0014449	419.1827524564729	97.635	2.6772	98.021	96.403	99.08	0.38548					177	64	4	0	0	0	0.43338	1	11768	11768		55.504	19.886	1	1008900	+		25814	28544	17345	17355	29493	29493					-0.07266325219950431
LCKCGASGG	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LCKCGASGG_					1	0	0			REV__ENST00000547035.5_1_12:53887565-53887598:-|nuORF	REV__ENST00000547035.5_1_12:53887565-53887598:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	419.183306	836.352059	1.9633	0.00082297	1.4836	0.00062188	3.4468	0.0014449	419.1827524564729	97.635	2.6772	98.021	96.403	99.08	0.38548	-0.029228	-0.0003376	NaN	55.504	177	64	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1008900	+		25815	28544	17345	17355							-0.07266325219950431
LCKELKRR	8	Unmodified	_LCKELKRR_					0	0	0			REV__chr17:16106427-16108786|26|14.04|0.39|5.17|-|1|TE_info:Charlie24,Charlie24_dup1256,hAT-Charlie,DNA,acceptor,-,16106266,16106427|None,NCOR1|2	REV__chr17:16106427-16108786|26|14.04|0.39|5.17|-|1|TE_info:Charlie24,Charlie24_dup1256,hAT-Charlie,DNA,acceptor,-,16106266,16106427|None,NCOR1|2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.318586	1044.62262	1.1965	0.00062614	0.31151	0.00016302	1.508	0.00078916	523.3176507249436	89.188	0.91159	89.236	88.966	89.877	0.048164					33	20	3	0	0	0	0.4196	1	9227	9227		27.882	3.6795	1	115290	+		25816	15648	17346	17356	29494	29494					0.10209190827617931
LCKKHCAL	8	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))KKHCAL_	LC(0.999)KKHC(0.001)AL		LC(30)KKHC(-30)AL		0	1	0			REV__ENST00000587602.5_1_19:1073185-1086002:+|nuORF	REV__ENST00000587602.5_1_19:1073185-1086002:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.7608337402344	2	486.759515	971.504477	0.0078128	3.803E-06	3.227	0.0015708	3.2348	0.0015746	486.76094746193235	37.226	3.175	37.539	36.88	40.055	0.31312					217	77	4	0	0	0	0.9159	1	3225	3225		44.531	7.5026	2	1950900	+		25817	15679	17347	17357	29495	29495	207				0.01758495247463543
LCKKKQGEV	9	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))KKKQGEV_	LC(1)KKKQGEV		LC(62)KKKQGEV		0	1	0		ENST00000512507.5_1_5:134695871-134696306:-|nuORF	ENST00000512507.5_1_5:134695871-134696306:-|nuORF	ENST00000512507.5_1_5:134695871-134696306:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3069458007812	2	545.307884	1088.60121	0.05614	3.0614E-05	-0.99886	-0.00054469	-0.94272	-0.00051407	545.3072318973699	58.019	0.81956	58.573	58.228	59.047	0.55323					26	19	2	0	0	0	0.33718	1	6070	6070		62.107	8.756	1	341880			25818	13039	17348	17358	29496	29496	170				0.060457610082494284
LCKPSRHR	8	Unmodified	_LCKPSRHR_					0	0	0			REV__nc|ENSG00000119509|Q9Y283-2|INVS	REV__nc|ENSG00000119509|Q9Y283-2|INVS	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8192443847656	2	498.779628	995.544702	-1.1543	-0.00057572	3.0212	0.0015069	1.8669	0.00093118	498.7811949543942	39.251	0.28714	39.204	39.035	39.322	-0.047005					9	6	2	0	0	0	0.4196	1	2784	2784		35.618	6.4687	1	33787	+		25819	18355	17349	17359	29497	29497					0.04675177962246835
LCKSADHRAT	10	Unmodified	_LCKSADHRAT_					0	0	0		nc|ENSG00000142303|Q9H324|ADAMTS10;ENSG00000142303|ENST00000597188|ADAMTS10;nc|ENSG00000142303|Q9H324-2|ADAMTS10	nc|ENSG00000142303|Q9H324|ADAMTS10	nc|ENSG00000142303|Q9H324|ADAMTS10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.2772216796875	2	551.277115	1100.53968	0.8757	0.00048275	-3.9886	-0.0021988	-3.1129	-0.0017161	551.2747934781779	27.265	1.266	27.237	26.749	28.015	-0.027706					88	32	4	0	0	0	0.86218	1	1282	1282		32.812	2.9709	1	621530			25820	4556	17350	17360	29498	29498					-0.006571706910335706
LCLALKNP	8	Unmodified	_LCLALKNP_					0	0	0		ENSG00000173572|ENST00000342929|NLRP13	ENSG00000173572|ENST00000342929|NLRP13	ENSG00000173572|ENST00000342929|NLRP13	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.25762939453125	2	436.257131	870.499709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.282	1	22.224	21.724	22.724	-0.05867								0	0	0	0.29353	1	707	707		28.254	1.4582	1				25821	6869	17351	17361	29499	29499					0.05927934376336452
LCLCLAASMVD	11	Unmodified	_LCLCLAASMVD_					0	0	0		ENST00000175756.9_1_2:131132345-131132438:+|nuORF	ENST00000175756.9_1_2:131132345-131132438:+|nuORF	ENST00000175756.9_1_2:131132345-131132438:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.7844848632812	2	569.768888	1137.52322	0.74719	0.00042573	4.0358	0.0022995	4.783	0.0027252	570.2726939752067	55.147	0.66895	55.716	55.447	56.116	0.56836					28	15	3	0	0	0	0.14847	1	5624	5624		76.774	12.567	1	126890			25822	9085	17352	17362	29500	29500					-0.04003755963663025
LCLEETLVY	9	Unmodified	_LCLEETLVY_					0	0	0		ENST00000361507.4_1_11:77991897-78128743:-|nuORF	ENST00000361507.4_1_11:77991897-78128743:-|nuORF	ENST00000361507.4_1_11:77991897-78128743:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.2808837890625	2	541.775551	1081.53655	-0.24307	-0.00013169	-4.3476	-0.0023554	-4.5907	-0.0024871	541.7737780264437	60.197	0.27868	60.183	60.075	60.354	-0.013733					9	6	2	0	0	0	0.20789	1	5555	5555		57.811	13.694	1	51926			25823	10480	17353	17363	29501	29501					-0.0009585858840637229
LCLELKAVLIH	11	Unmodified	_LCLELKAVLIH_					0	0	0		ENST00000514158.5_3_5:88236702-88237014:+|nuORF	ENST00000514158.5_3_5:88236702-88237014:+|nuORF	ENST00000514158.5_3_5:88236702-88237014:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.9223327636719	3	417.921298	1250.74206	3.1807	0.0013293	-0.77614	-0.00032436	2.4045	0.0010049	417.9209605426618	105.73	2.7025	105.77	104.99	107.7	0.038322					262	63	6	0	0	0	0.75041	2	11610	11610;11702		25.126	8.5961	1	23553000			25824	13065	17354	17364	29502;29503	29502					0.1267233966166259
LCLELKAVLIH	11	Unmodified	_LCLELKAVLIH_					0	0	0		ENST00000514158.5_3_5:88236702-88237014:+|nuORF	ENST00000514158.5_3_5:88236702-88237014:+|nuORF	ENST00000514158.5_3_5:88236702-88237014:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.92242431640625	3	417.921298	1250.74206	0.73411	0.0003068	1.6007	0.00066898	2.3348	0.00097578	417.9219647760214	105.64	2.8346	105.75	104.94	107.78	0.10766					247	69	5	0	0	0	0.75041	1	11327	11327		14.086	0	1	29053000			25825	13065	17354	17364	29504	29504					0.1267233966166259
LCLIAAVLSA	10	Unmodified	_LCLIAAVLSA_					0	0	0		nc|ENSG00000104044|Q04671-3|OCA2;nc|ENSG00000104044|Q04671-2|OCA2;chr15:27989666-28014776|22|11.05|0.53|4.39|-|ENST00000353809|OCA2,OCA2;ENSG00000104044|ENST00000354638|OCA2	nc|ENSG00000104044|Q04671-3|OCA2	nc|ENSG00000104044|Q04671-3|OCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.2925109863281	2	487.291171	972.567789	1.0235	0.00049874	2.9013	0.0014138	3.9248	0.0019125	487.2924407717673	90.775	1.1445	91.226	90.782	91.926	0.45058					81	27	4	0	0	0	0.67608	1	10758	10758		45.952	7.1458	1	1618400			25826	181	17355	17365	29505	29505					0.08040759236348549
LCLKRLLVMQH	11	Unmodified	_LCLKRLLVMQH_					0	0	0			REV__ENSG00000111581|ENST00000229179|NUP107	REV__ENSG00000111581|ENST00000229179|NUP107	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9324035644531	3	451.933432	1352.77847	-0.13839	-6.2545E-05	-1.4693	-0.00066401	-1.6077	-0.00072655	451.93267141602934	99.223	2.3092	99.273	97.79	100.1	0.049828					147	53	3	0	0	0	0.74022	1	10512	10512		24.232	5.7008	1	486010	+		25827	17875	17356	17366	29506	29506					0.11618893286731691
LCLLLNRW	8	Unmodified	_LCLLLNRW_					0	0	0			REV__ENST00000378567.7_1_1:2116518-2116767:+|nuORF	REV__ENST00000378567.7_1_1:2116518-2116767:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.79638671875	2	515.796955	1029.57936	-0.0063158	-3.2577E-06	2.5362	0.0013081	2.5298	0.0013049	515.7979776623419	22.5	0.57006	22.441	22.217	22.787	-0.058668					43	21	3	0	0	0	0.91005	1	724	724		42.474	1.6963	1	61606	+		25828	25901	17357	17367	29507	29507					0.06575001050327955
LCLLTKSSD	9	Unmodified	_LCLLTKSSD_					0	0	0			REV__ENSG00000148843|ENST00000369797|PDCD11	REV__ENSG00000148843|ENST00000369797|PDCD11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	490.258056640625	2	490.260068	978.505582	-0.7686	-0.00037682	-3.3731	-0.0016537	-4.1417	-0.0020305	490.2582311851216	107.58	0.88774	107.58	106.84	107.73	0					59	20	4	0	0	0	0.77696	1	11174	11174		31.53	3.6476	1	787300	+		25829	20142	17358	17368	29508	29508					0.015469880973682848
LCLMLLPY	8	Unmodified	_LCLMLLPY_					0	0	0		ENST00000589179.5_1_12:53590798-53590921:-|nuORF	ENST00000589179.5_1_12:53590798-53590921:-|nuORF	ENST00000589179.5_1_12:53590798-53590921:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.2373962402344	2	483.263568	964.512582	0.20455	9.8853E-05	4.2767	0.0020668	4.4813	0.0021656	483.2671035168466	39.914	0.40789	39.883	39.765	40.173	-0.030273					12	9	2	0	0	0	0.4196	1	2818	2818		33.493	0	1	57319			25830	14231	17359	17369	29509	29509					0.028906294442322178
LCLPALRALG	10	Unmodified	_LCLPALRALG_					0	0	0		ENST00000563588.5_1_16:30768252-30768357:+|nuORF	ENST00000563588.5_1_16:30768252-30768357:+|nuORF	ENST00000563588.5_1_16:30768252-30768357:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8085327148438	2	513.810062	1025.60557	-1.4445	-0.00074222	-0.71223	-0.00036595	-2.1568	-0.0011082	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.81018	1	3804	3804		38.806	0	1	1675700			25831	13872	17360	17370	29510	29510					0.09379270221802471
LCLPWLPRAS	10	Unmodified	_LCLPWLPRAS_					0	0	0		ENST00000589786.5_1_19:34287845-34297769:+|nuORF;ENST00000284006.10_1_19:34287845-34297769:+|nuORF	ENST00000589786.5_1_19:34287845-34297769:+|nuORF	ENST00000589786.5_1_19:34287845-34297769:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3209838867188	2	578.320794	1154.62703	-0.45444	-0.00026281	0.42665	0.00024674	-0.027788	-1.607E-05	578.3212868289457	92.787	2.7225	92.787	91.761	94.484	0					150	62	3	0	0	0	0.8608	1	9130	9130		34.173	7.1252	1	310260			25832	9642	17361	17371	29511	29511					0.05590655250534837
LCLVVKRVTRH	11	Unmodified	_LCLVVKRVTRH_					0	0	0		ENST00000508510.5_1_4:76649268-76649475:-|nuORF	ENST00000508510.5_1_4:76649268-76649475:-|nuORF	ENST00000508510.5_1_4:76649268-76649475:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.6092529296875	3	441.939575	1322.79689	-1.4755	-0.00065207	2.0361	0.00089985	0.56067	0.00024778	441.9403125343586	55.224	1.199	55.287	54.704	55.903	0.063725					106	39	3	0	0	0	0.70584	1	4679	4679		30.569	4.6771	1	485540			25833	12976	17362	17372	29512	29512					0.1484077125294334
LCMMRCLVI	9	Carbamidomethyl (C)	_LCMMRC(Carbamidomethyl (C))LVI_	LC(0.003)MMRC(0.997)LVI		LC(-26)MMRC(26)LVI		0	1	0		ENST00000267068.5_2_13:33110836-33110986:-|nuORF	ENST00000267068.5_2_13:33110836-33110986:-|nuORF	ENST00000267068.5_2_13:33110836-33110986:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.7860717773438	2	569.783818	1137.55308	-1.1457	-0.00065282	3.7333	0.0021272	2.5876	0.0014744	569.7861970991918	79.812	0.4496	79.872	79.652	80.101	0.059349					25	14	2	0	0	0	0.5393	1	7787	7787		50.025	12.865	2	126650			25834	9525	17363	17373	29513	29513	124				-0.010190954993049672
LCMSYQEPQL	10	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))MSYQEPQL_	LC(1)MSYQEPQL		LC(48)MSYQEPQL		0	1	0		nc|ENSG00000132004|Q5XUX1-2|FBXW9;ENSG00000132004|ENST00000393261|FBXW9	nc|ENSG00000132004|Q5XUX1-2|FBXW9	nc|ENSG00000132004|Q5XUX1-2|FBXW9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.7838745117188	2	634.786124	1267.55769	-0.95436	-0.00060581	-2.2799	-0.0014472	-3.2342	-0.002053	634.7846706492742	30.661	0.62018	30.689	30.362	30.982	0.028618					32	13	3	0	0	0	0.64457	1	2018	2018		47.657	18.487	1	369920			25835	14919	17364	17374	29514	29514	200				-0.06538216551211917
LCNKFGNSLK	10	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))NKFGNSLK_	LC(1)NKFGNSLK		LC(67)NKFGNSLK		0	1	0		ENST00000486187.5_1_10:43078317-43078551:-|nuORF	ENST00000486187.5_1_10:43078317-43078551:-|nuORF	ENST00000486187.5_1_10:43078317-43078551:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8074340820312	2	590.81079	1179.60703	0.77133	0.00045571	-3.8204	-0.0022571	-3.0491	-0.0018014	590.8085136634772	59.814	1.2746	59.908	59.359	60.634	0.094063					111	41	3	0	0	0	0.35939	1	5205	5205		67.494	10.773	1	4884800			25836	12575	17365	17375	29515	29515	162				0.024408595199020056
LCNNKIIN	8	Unmodified	_LCNNKIIN_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|68|3|sense	L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|68|3|sense	L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|68|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.25469970703125	2	466.25512	930.495686	-0.11965	-5.5788E-05	-2.968	-0.0013838	-3.0876	-0.0014396	466.2536537931843	61.171	1.1863	61.159	60.038	61.224	-0.012203					48	38	2	0	0	0	0.884	1	5606	5606		33.516	3.674	1	281870			25837	14514	17366	17376	29516	29516					0.027658448826286985
LCPAAALPGTA	11	Unmodified	_LCPAAALPGTA_					0	0	0		ENST00000480597.5_1_9:139648952-139651016:-|nuORF;ENST00000482893.1_1_9:139649556-139650038:-|nuORF	ENST00000480597.5_1_9:139648952-139651016:-|nuORF	ENST00000480597.5_1_9:139648952-139651016:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.796142578125	2	492.762778	983.511002	-0.55152	-0.00027177	-3.2955	-0.0016239	-3.847	-0.0018956	492.7608572397583	52.669	0.41368	53.093	52.97	53.384	0.42348					15	9	2	0	0	0	0.16498	1	5280	5280		19.997	0	1	189230			25838	12444	17367	17377	29517	29517					0.01858711679813041
LCPDDNNPK	9	Unmodified	_LCPDDNNPK_					0	0	0			REV__nc|ENSG00000102893|Q93100-4|PHKB	REV__nc|ENSG00000102893|Q93100-4|PHKB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2274475097656	2	508.229299	1014.44404	-0.14391	-7.314E-05	-3.1979	-0.0016253	-3.3418	-0.0016984	508.2275176781704	29.93	0.76656	29.915	29.601	30.367	-0.015167					34	17	3	0	0	0	0.78983	1	1543	1543		27.882	0	1	110850	+		25839	29749	17368	17378	29518	29518					-0.06259943601935447
LCPGALVLLKH	11	Unmodified	_LCPGALVLLKH_					0	0	0			REV__nc|ENSG00000130479|Q66K74-2|MAP1S	REV__nc|ENSG00000130479|Q66K74-2|MAP1S	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3534545898438	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.96	1	115.94	115.44	116.44	-0.02433								0	0	0	0.56276	1	12831	12831		29.15	1.2673	1		+		25840	18876	17369	17379	29519	29519					0.11479801318728278
LCPGAQLR	8	Unmodified	_LCPGAQLR_					0	0	0			REV__ENST00000475650.1_1_16:30370373-30370970:-|nuORF	REV__ENST00000475650.1_1_16:30370373-30370970:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	429.2355651855469	2	429.23673	856.458907	-0.18423	-7.9079E-05	-2.195	-0.00094218	-2.3792	-0.0010213	429.2356552162288	63.259	2.3661	63.225	62.64	65.006	-0.03371					245	81	5	0	0	0	0.89457	1	5998	5998		37.028	2.8559	1	5881100	+		25841	27322	17370	17380	29520	29520					0.024935930567380638
LCPGVPEELFE	11	Unmodified	_LCPGVPEELFE_					0	0	0		ENST00000482005.5_1_17:61932137-61934782:+|nuORF	ENST00000482005.5_1_17:61932137-61934782:+|nuORF	ENST00000482005.5_1_17:61932137-61934782:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	616.7996215820312	2	616.797014	1231.57948	-0.062797	-3.8733E-05	3.2168	0.0019841	3.154	0.0019454	616.7987436689413	45.977	0.73335	45.959	45.66	46.393	-0.018585					37	17	3	0	0	0	0.64498	1	3678	3678		39.253	3.6345	1	259660			25842	12477	17371	17381	29521	29521					-0.02705088530979083
LCQGPKAS	8	Unmodified	_LCQGPKAS_					0	0	0		ENST00000561483.5_1_15:84323016-84694242:+|nuORF;nc|ENSG00000156218|P82987-2|ADAMTSL3;ENSG00000156218|ENST00000286744|ADAMTSL3	ENST00000561483.5_1_15:84323016-84694242:+|nuORF	ENST00000561483.5_1_15:84323016-84694242:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.2044372558594	2	402.207638	802.400723	-1.7943	-0.00072169	-3.0466	-0.0012254	-4.8409	-0.0019471	402.20636046917366	98.897	1.8674	99.119	98.298	100.17	0.22262					109	43	3	0	0	0	0.87064	1	10283	10283		29.15	2.3535	1	737490			25843	5367	17372	17382	29522	29522					-0.008380885885571843
LCQLHKLETAK	11	Unmodified	_LCQLHKLETAK_					0	0	0			REV__ENSG00000109471|ENST00000226730|IL2	REV__ENSG00000109471|ENST00000226730|IL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3639526367188	2	642.360647	1282.70674	2.6979	0.001733	1.3823	0.00088794	4.0802	0.0026209	642.3614862410728	110.98	0.6926	110.96	110.44	111.13	-0.026321					31	19	2	0	0	0	0.68532	1	12248	12248		33.922	2.3918	1	362170	+		25844	17760	17373	17383	29523	29523					0.07669677133867481
LCRAYFVI	8	Unmodified	_LCRAYFVI_					0	0	0		ENST00000607711.1_1_6:15244838-15244892:-|nuORF	ENST00000607711.1_1_6:15244838-15244892:-|nuORF	ENST00000607711.1_1_6:15244838-15244892:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.7720642089844	2	492.770406	983.526258	-0.078994	-3.8926E-05	2.0542	0.0010123	1.9752	0.00097333	492.7715093797498	72.669	0.60105	72.706	72.5	73.101	0.037148					28	21	2	0	0	0	0.89457	1	6925	6925		37.028	2.8559	1	66732			25845	14467	17374	17384	29524	29524					0.0338362326766628
LCRLQEKQHK	10	Unmodified	_LCRLQEKQHK_					0	0	0			REV__nc|ENSG00000164989|Q6TFL3-3|CCDC171	REV__nc|ENSG00000164989|Q6TFL3-3|CCDC171	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3617553710938	2	641.856064	1281.69757	1.7061	0.001095	3.8489	0.0024705	5.555	0.0035655	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.74274	2	12762	12762;13127		42.396	0.96952	1	27133000	+		25846	21138	17375	17385	29525;29526	29525					0.06799328568195051
LCRPLSMSE	9	Unmodified	_LCRPLSMSE_					0	0	0		ENST00000319715.8_2_16:24551609-24551672:+|nuORF	ENST00000319715.8_2_16:24551609-24551672:+|nuORF	ENST00000319715.8_2_16:24551609-24551672:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2508544921875	2	518.25172	1034.48889	1.0455	0.00054185	-1.7743	-0.00091954	-0.72879	-0.00037769	518.2506399614301	33.7	0.45403	34.005	33.787	34.241	0.30494					26	10	3	0	0	0	0.19818	1	2469	2469		74.255	5.4682	1	523720			25847	10020	17376	17386	29527	29527					-0.026978360602470275
LCRRPWRPSNL	11	Unmodified	_LCRRPWRPSNL_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.59002685546875	3	466.590945	1396.75101	0.051039	2.3814E-05	-3.3411	-0.0015589	-3.2901	-0.0015351	466.5893455631255	55.718	0.63055	56.277	55.941	56.572	0.55954					39	16	4	0	0	0	0.74002	1	5762	5762		24.276	0.04411	1	1606400	+		25848	20661	17377	17387	29528	29528					0.06850126070753504
LCRSVKPRLH	10	Unmodified	_LCRSVKPRLH_					0	0	0		chr18:9522509-9530834|27|13.59|0.79|4.1|+|1|RALBP1,RALBP1|2	chr18:9522509-9530834|27|13.59|0.79|4.1|+|1|RALBP1,RALBP1|2	chr18:9522509-9530834|27|13.59|0.79|4.1|+|1|RALBP1,RALBP1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.5748596191406	3	403.573003	1207.69718	2.802	0.0011308	1.7615	0.00071091	4.5635	0.0018417	403.5736497882377	83.618	2.5639	83.677	83.026	85.59	0.059258					112	58	3	0	0	0	0.86621	1	8451	8451		26.063	1.8316	1	261970			25849	260	17378	17388	29529	29529					0.10163953639016654
LCSERPPQ	8	Unmodified	_LCSERPPQ_					0	0	0			REV__ENSG00000266714|ENST00000645453|MYO15B	REV__ENSG00000266714|ENST00000645453|MYO15B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.790771484375	2	465.229102	928.443651	0.24606	0.00011448	-3.8163	-0.0017755	-3.5702	-0.001661	465.2271420119526	34.26	0.37041	34.47	34.234	34.604	0.21003					13	8	2	0	0	0	0.4196	1	2505	2505		40.573	1.7665	1	379510	+		25850	23964	17379	17389	29530	29530					-0.023433185311205307
LCTAGMRLL	9	Unmodified	_LCTAGMRLL_					0	0	0		ENSG00000198018|ENST00000370489|ENTPD7	ENSG00000198018|ENST00000370489|ENTPD7	ENSG00000198018|ENST00000370489|ENTPD7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.7691955566406	2	489.267173	976.519793	-1.2028	-0.00058851	1.5416	0.00075425	0.33875	0.00016574	489.26775815572165	40.707	0.50734	40.666	40.383	40.891	-0.04081					25	13	2	0	0	0	0.76764	1	3006	3006		34.173	0	1	315910			25851	8227	17380	17390	29531	29531					0.030593620446666137
LCTITGCVY	9	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))TITGCVY_	LC(0.999)TITGC(0.001)VY		LC(29)TITGC(-29)VY		0	1	0		ENST00000550011.5_1_12:32832273-32858928:+|nuORF	ENST00000550011.5_1_12:32832273-32858928:+|nuORF	ENST00000550011.5_1_12:32832273-32858928:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	515.2403564453125	2	515.240821	1028.46709	-0.37021	-0.00019075	-0.49685	-0.000256	-0.86706	-0.00044675	515.2404361126636	47.52	0.54141	47.539	47.235	47.776	0.018967					38	17	3	0	0	0	0.32449	1	3538	3538		62.978	11.643	2	721160			25852	13650	17381	17391	29532	29532	183				-0.04600640808826029
LCTITGCVY	9	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))TITGCVY_	LC(1)TITGCVY		LC(46)TITGC(-46)VY		0	1	0		ENST00000550011.5_1_12:32832273-32858928:+|nuORF	ENST00000550011.5_1_12:32832273-32858928:+|nuORF	ENST00000550011.5_1_12:32832273-32858928:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	515.2402954101562	2	515.240821	1028.46709	-0.1252	-6.4509E-05	-0.62239	-0.00032068	-0.74759	-0.00038519	515.2403804188378	47.505	0.54878	47.417	47.135	47.684	-0.087646					40	18	4	0	0	0	0.17071	1	3556	3556		79.939	11.152	2	667210			25853	13650	17381	17391	29533	29533	183				-0.04600640808826029
LCVCLELLY	9	Unmodified	_LCVCLELLY_					0	0	0			REV__ENST00000529790.5_1_11:118272380-118277657:+|nuORF	REV__ENST00000529790.5_1_11:118272380-118277657:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	534.7750854492188	2	534.777039	1067.53953	-0.34082	-0.00018226	1.1161	0.00059688	0.77532	0.00041462	534.7773495187383	64.303	0.77142	64.33	64.027	64.799	0.027145					43	20	3	0	0	0	0.72402	1	6071	6071		38.806	2.3594	1	218010	+		25854	28271	17382	17392	29534	29534					0.008456932647732174
LCVCLELLY	9	Unmodified	_LCVCLELLY_					0	0	0			REV__ENST00000529790.5_1_11:118272380-118277657:+|nuORF	REV__ENST00000529790.5_1_11:118272380-118277657:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	534.777039	1067.53953	-0.062823	-3.3597E-05	0.6472	0.00034611	0.58438	0.00031251	534.7770457308044	64.463	0.6474	64.463	64.197	64.844	-0.00078583	0.092709	-5.625E-05	NaN	38.806	39	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	214700	+		25855	28271	17382	17392							0.008456932647732174
LCVCLELLY	9	Unmodified	_LCVCLELLY_					0	0	0			REV__ENST00000529790.5_1_11:118272380-118277657:+|nuORF	REV__ENST00000529790.5_1_11:118272380-118277657:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	534.777039	1067.53953	0.45174	0.00024158	0.33136	0.0001772	0.7831	0.00041878	534.7769200401495	64.351	0.73689	64.317	64.026	64.763	-0.034256	-0.052759	-0.00039406	NaN	38.806	41	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	265100	+		25856	28271	17382	17392							0.008456932647732174
LCVCLELLY	9	Unmodified	_LCVCLELLY_					0	0	0			REV__ENST00000529790.5_1_11:118272380-118277657:+|nuORF	REV__ENST00000529790.5_1_11:118272380-118277657:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	534.777039	1067.53953	-0.34082	-0.00018226	1.1161	0.00059688	0.77532	0.00041462	534.7773495187383	64.303	0.77142	64.33	64.027	64.799	0.027145	-0.03995	0.0004453	NaN	38.806	43	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	218010	+		25857	28271	17382	17392							0.008456932647732174
LCVKVNTK	8	Unmodified	_LCVKVNTK_					0	0	0		nc|ENSG00000033800|O75925-3|PIAS1;ENSG00000033800|ENST00000249636|PIAS1;nc|ENSG00000033800|O75925-2|PIAS1	nc|ENSG00000033800|O75925-3|PIAS1	nc|ENSG00000033800|O75925-3|PIAS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.76861572265625	2	452.767863	903.521173	-2.0307	-0.00091944	3.8225	0.0017307	1.7918	0.00081129	452.7693705732477	29.816	0.72486	29.816	29.483	30.208	0					42	24	2	0	0	0	0.81548	1	1301	1301		20.482	1.1219	1	85883			25858	14743	17383	17393	29535	29535					0.065553194050608
LCVLSPRHLL	10	Unmodified	_LCVLSPRHLL_					0	0	0		ENST00000593019.1_1_18:77802090-77806152:+|nuORF	ENST00000593019.1_1_18:77802090-77806152:+|nuORF	ENST00000593019.1_1_18:77802090-77806152:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8426513671875	2	575.841894	1149.66923	0.60609	0.00034901	1.2709	0.00073183	1.877	0.0010808	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.77314	1	8930	8930		40.778	2.9666	1	2381900			25859	14302	17384	17394	29536	29536					0.10038630658914371
LCVTQRYLQ	9	Carbamidomethyl (C)	_LC(Carbamidomethyl (C))VTQRYLQ_	LC(1)VTQRYLQ		LC(77)VTQRYLQ		0	1	0			REV__nc|ENSG00000143199|Q96PN6-3|ADCY10	REV__nc|ENSG00000143199|Q96PN6-3|ADCY10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8087768554688	2	590.81079	1179.60703	0.522	0.0003084	-3.4822	-0.0020574	-2.9603	-0.0017489	590.8087294350913	59.786	1.1886	59.902	59.476	60.664	0.11676					102	40	3	0	0	0	0.18566	1	5204	5204		76.847	7.219	1	4726100	+		25860	19782	17385	17395	29537	29537	249				0.024408595199020056
LCWQPIFF	8	Unmodified	_LCWQPIFF_					0	0	0			REV__L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|68|2|sense	REV__L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|68|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.7996215820312	2	527.264956	1052.51536	-0.26603	-0.00014027	2.6682	0.0014068	2.4021	0.0012666	527.2665340933027	61.79	0.66607	62.178	61.825	62.491	0.38846					29	14	3	0	0	0	0.4196	1	6606	6606		37.028	0	1	143810	+		25861	29604	17386	17396	29538	29538					-0.008797791065944693
LCWSPWVT	8	Unmodified	_LCWSPWVT_					0	0	0			REV__ENST00000446604.6_1_17:67079128-67079407:-|nuORF	REV__ENST00000446604.6_1_17:67079128-67079407:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2376708984375	2	496.238938	990.463324	0.044181	2.1924E-05	-1.6503	-0.00081897	-1.6062	-0.00079704	496.23798670369024	31.087	1.204	31.091	30.623	31.827	0.0037212					56	27	4	0	0	0	0.89457	1	2122	2122		37.028	2.8559	1	1990100	+		25862	26808	17387	17397	29539	29539					-0.03228942520354394
LDAAKTRLKKA	11	Unmodified	_LDAAKTRLKKA_					0	0	0		nc|ENSG00000097033|Q9Y371-3|SH3GLB1;ENSG00000097033|ENST00000370558|SH3GLB1;nc|ENSG00000097033|Q9Y371-2|SH3GLB1	nc|ENSG00000097033|Q9Y371-3|SH3GLB1	nc|ENSG00000097033|Q9Y371-3|SH3GLB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.3844604492188	2	607.882604	1213.75066	0.048596	2.9541E-05	-0.25906	-0.00015748	-0.21046	-0.00012794	608.3855940372756	99.006	1.8414	99.054	98.41	100.25	0.048157					65	42	2	0	0	0	0.79584	1	10669	10669		12.207	0.69566	1	432200			25863	1745	17388	17398	29540	29540					0.15233029622504546
LDAARAPR	8	Unmodified	_LDAARAPR_					0	0	0		ENST00000463337.1_2_20:62669539-62670381:+|nuORF;ENST00000358393.1_2_20:62669539-62670381:+|nuORF	ENST00000463337.1_2_20:62669539-62670381:+|nuORF	ENST00000463337.1_2_20:62669539-62670381:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25164794921875	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.85277	1	7574	7574		25.45	1.2474	1	3370400			25864	10409	17389	17399	29541	29541					0.048394536773685104
LDAARAPR	8	Unmodified	_LDAARAPR_					0	0	0		ENST00000463337.1_2_20:62669539-62670381:+|nuORF;ENST00000358393.1_2_20:62669539-62670381:+|nuORF	ENST00000463337.1_2_20:62669539-62670381:+|nuORF	ENST00000463337.1_2_20:62669539-62670381:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25164794921875	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.90983	1	9208	9208		42.396	7.1954	1	2020200			25865	10409	17389	17399	29542	29542					0.048394536773685104
LDAASVAAP	9	Unmodified	_LDAASVAAP_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.72088623046875	2	407.718893	813.423233	2.6827	0.0010938	1.362	0.00055532	4.0447	0.0016491	407.7196256873708	102.15	0.80925	102.41	102.07	102.88	0.26322					65	19	4	0	0	0	0.28875	1	12422	12422		65.803	4.8312	1	5496600	+		25866	23536	17390	17400	29543	29543					0.009058340807087006
LDAASVAAP	9	Unmodified	_LDAASVAAP_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	407.718893	813.423233	-0.97105	-0.00039592	6.2519	0.002549	5.2808	0.0021531	407.72117498206944	102.51	0.86001	102.51	102.1	102.96	0	0.10939	0.0015378	NaN	65.803	28	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115100	+		25867	23536	17390	17400							0.009058340807087006
LDAASVAAP	9	Unmodified	_LDAASVAAP_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	407.718893	813.423233	-0.18606	-7.5858E-05	4.6183	0.001883	4.4322	0.0018071	407.7208122098142	102.48	0.93712	102.5	102.08	103.02	0.01989	0.10231	0.0002057	NaN	65.803	43	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	506200	+		25868	23536	17390	17400							0.009058340807087006
LDAASVAAP	9	Unmodified	_LDAASVAAP_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	407.718893	813.423233	2.7164	0.0011075	2.1891	0.00089255	4.9056	0.0020001	407.7196181808325	102.43	0.90546	102.38	101.92	102.83	-0.047005	-0.016266	-0.0017751	NaN	65.803	33	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	476350	+		25869	23536	17390	17400							0.009058340807087006
LDAASVAAP	9	Unmodified	_LDAASVAAP_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	407.718893	813.423233	3.1802	0.0012966	1.8287	0.00074561	5.0089	0.0020422	407.7194490303247	102.27	0.9475	102.32	101.93	102.88	0.043198	-0.081429	-0.002069	NaN	65.803	38	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	534340	+		25870	23536	17390	17400							0.009058340807087006
LDAASVAAP	9	Unmodified	_LDAASVAAP_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	407.718893	813.423233	-1.791	-0.00073022	6.5897	0.0026867	4.7987	0.0019565	407.7214795041552	102.15	0.92283	102.35	101.93	102.85	0.19484	-0.049647	0.0018132	NaN	65.803	44	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	580510	+		25871	23536	17390	17400							0.009058340807087006
LDAASVAAP	9	Unmodified	_LDAASVAAP_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	407.718893	813.423233	0.734	0.00029927	4.0617	0.001656	4.7957	0.0019553	407.7203985462025	102.21	0.96331	102.34	101.98	102.94	0.13522	-0.05164	-0.00024817	NaN	65.803	42	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	616810	+		25872	23536	17390	17400							0.009058340807087006
LDAASVAAP	9	Unmodified	_LDAASVAAP_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	407.718893	813.423233	-1.9254	-0.00078504	6.8161	0.0027791	4.8907	0.001994	407.72151840185046	102.21	0.9698	102.34	101.93	102.9	0.13569	-0.05268	0.0019979	NaN	65.803	39	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	559720	+		25873	23536	17390	17400							0.009058340807087006
LDAFALSVI	9	Unmodified	_LDAFALSVI_					0	0	0			REV__nc|ENSG00000164270|Q13639-9|HTR4	REV__nc|ENSG00000164270|Q13639-9|HTR4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.77392578125	2	474.773668	947.532783	1.6045	0.00076178	-1.3857	-0.00065788	0.21883	0.00010389	474.7729143386918	94.736	1.0324	95.168	94.846	95.878	0.4324					45	24	3	0	0	0	0.43338	1	11318	11318		55.504	0	1	608530	+		25874	29989	17391	17401	29544	29544					0.056918397000458754
LDAFALSVI	9	Unmodified	_LDAFALSVI_					0	0	0			REV__nc|ENSG00000164270|Q13639-9|HTR4	REV__nc|ENSG00000164270|Q13639-9|HTR4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.77374267578125	2	474.773668	947.532783	-0.68646	-0.00032591	0.941	0.00044676	0.25454	0.00012085	474.7739625373348	94.858	1.1753	95.278	94.933	96.109	0.41963					51	28	3	0	0	0	0.47272	1	11373	11373		53.351	0	1	642350	+		25875	29989	17391	17401	29545	29545					0.056918397000458754
LDAPVLRIL	9	Unmodified	_LDAPVLRIL_					0	0	0		ENST00000318037.3_1_3:196230147-196230231:-|nuORF	ENST00000318037.3_1_3:196230147-196230231:-|nuORF	ENST00000318037.3_1_3:196230147-196230231:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.3238220214844	2	505.32386	1008.63317	-0.455	-0.00022992	0.3436	0.00017363	-0.1114	-5.6295E-05	505.32388066483486	80.737	0.95578	80.874	80.482	81.437	0.13702					61	22	4	0	0	0	0.76255	1	7693	7693		35.618	5.1146	1	769050			25876	10001	17392	17402	29546	29546					0.12919496753693238
LDAVTRDSSG	10	Unmodified	_LDAVTRDSSG_					0	0	0		ENSG00000112139|ENST00000434837|MDGA1;nc|ENSG00000112139|Q8NFP4-2|MDGA1	ENSG00000112139|ENST00000434837|MDGA1	ENSG00000112139|ENST00000434837|MDGA1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.75091552734375	2	510.751453	1019.48835	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.08	1	19.154	18.654	19.654	0.073465								0	0	0	0.45132	1	360	360		29.17	2.374	1				25877	2634	17393	17403	29547	29547					-0.020612161840745102
LDDASLPVSD	10	Unmodified	_LDDASLPVSD_					0	0	0		ENST00000368989.6_2_10:124187820-124189451:+|nuORF;ENSG00000107679|ENST00000368990|PLEKHA1	ENST00000368989.6_2_10:124187820-124189451:+|nuORF	ENST00000368989.6_2_10:124187820-124189451:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3140258789062	2	516.248212	1030.48187	-0.68325	-0.00035273	1.4668	0.00075723	0.78355	0.00040451	516.2480848350565	99.589	0.16283	99.589	99.472	99.635	0					7	3	3	0	0	0	0.37624	1	10066	10066		27.882	0	1	31603			25878	2359	17394	17404	29548	29548					-0.03215154135455123
LDDLKVKLKSD	11	Unmodified	_LDDLKVKLKSD_					0	0	0			REV__ENSG00000166685|ENST00000299886|COG1	REV__ENSG00000166685|ENST00000299886|COG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	637.369384765625	2	637.371735	1272.72892	-0.10165	-6.4787E-05	-1.8536	-0.0011814	-1.9553	-0.0012462	637.3704665370327	105.92	2.1512	105.89	105.23	107.38	-0.025146					153	50	4	0	0	0	0.74022	1	11496	11496		24.232	2.5461	1	1622600	+		25879	21310	17395	17405	29549	29549					0.10346180083251966
LDELPKKRLPS	11	Unmodified	_LDELPKKRLPS_					0	0	0			REV__nc|ENSG00000198862|O94822-3|LTN1	REV__nc|ENSG00000198862|O94822-3|LTN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.5975646972656	3	432.594238	1294.76089	4.4309	0.0019168	3.1674	0.0013702	7.5983	0.003287	432.59555881758706	105.87	0.94759	106.05	105.78	106.73	0.18647					87	38	4	0	0	0	0.72374	1	12960	12960		27.644	3.4121	1	830660	+		25880	23401	17396	17406	29550	29550					0.12529592557098113
LDEMIALQT	9	Unmodified	_LDEMIALQT_					0	0	0		nc|ENSG00000104112|Q8WXD2-2|SCG3;ENSG00000104112|ENST00000220478|SCG3	nc|ENSG00000104112|Q8WXD2-2|SCG3	nc|ENSG00000104112|Q8WXD2-2|SCG3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2791748046875	2	517.26535	1032.51615	-1.8546	-0.00095934	-0.24849	-0.00012853	-2.1031	-0.0010879	517.2650838390413	43.193	0.51862	43.967	43.624	44.143	0.7738					26	12	3	0	0	0	0.20789	1	3885	3885		34.173	5.023	1	1281800			25881	2115	17397	17407	29551	29551					0.0011897075175966165
LDEPREPVTI	10	Unmodified	_LDEPREPVTI_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.8119506835938	2	584.814053	1167.61355	0.46191	0.00027013	1.3943	0.00081538	1.8562	0.0010855	584.8144932009742	62.042	0.42381	62.009	61.801	62.225	-0.033169					15	12	2	0	0	0	0.86348	1	5854	5854		31.53	0	1	97047	+		25882	20437;29946	17398	17408	29552	29552					0.03645075952294974
LDERYQIL	8	Unmodified	_LDERYQIL_					0	0	0			REV__nc|ENSG00000173230|Q14789-4|GOLGB1	REV__nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2854614257812	2	525.284931	1048.55531	0.66658	0.00035014	-0.86494	-0.00045434	-0.19836	-0.0001042	525.284599336858	56.594	0.68504	57.154	56.92	57.605	0.55954					42	15	4	0	0	0	0.88944	1	5866	5866		57.811	2.3071	1	574180	+		25883	21904	17399	17409	29553	29553					0.03297439097673305
LDEYEEAF	8	Unmodified	_LDEYEEAF_					0	0	0			REV__ENSG00000149177|ENST00000418331|PTPRJ	REV__ENSG00000149177|ENST00000418331|PTPRJ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.756591796875	2	508.21638	1014.41821	-0.16718	-8.4963E-05	-2.5153	-0.0012783	-2.6825	-0.0013633	508.215118362897	70.183	0.39756	70.567	70.393	70.791	0.38416					13	9	2	0	0	0	0.4196	1	7761	7761		20.482	0	1	89536	+		25884	20152	17400	17410	29554	29554					-0.08842514572563687
LDFALVELC	9	Unmodified	_LDFALVELC_					0	0	0		ENST00000263805.8_1_15:42706643-42706832:-|nuORF	ENST00000263805.8_1_15:42706643-42706832:-|nuORF	ENST00000263805.8_1_15:42706643-42706832:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.7652282714844	2	511.764986	1021.51542	0.2526	0.00012927	2.5032	0.0012811	2.7558	0.0014103	511.76673327052123	30.992	0.57183	31.01	30.813	31.384	0.01836					15	13	2	0	0	0	0.20789	1	1657	1657		16.473	0	1	32079			25885	9465	17401	17411	29555	29555					0.005521761027353023
LDFETEHKLDP	11	Unmodified	_LDFETEHKLDP_					0	0	0		ENSG00000164828|ENST00000401592|SUN1;nc|ENSG00000164828|O94901-9|SUN1;nc|ENSG00000164828|O94901-6|SUN1;ENST00000413171.6_1_7:872152-892516:+|nuORF;ENST00000483996.1_1_7:872152-878624:+|nuORF;nc|ENSG00000164828|O94901-4|SUN1;ENST00000427969.5_1_7:878456-882177:+|nuORF;nc|ENSG00000164828|O94901-2|SUN1;nc|ENSG00000164828|O94901-7|SUN1;nc|ENSG00000164828|O94901-3|SUN1;ENST00000340926.7_1_7:872152-889323:+|nuORF	ENSG00000164828|ENST00000401592|SUN1	ENSG00000164828|ENST00000401592|SUN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2870788574219	3	448.554108	1342.6405	0.222	9.9581E-05	-2.061	-0.00092447	-1.839	-0.00082489	448.5531210919178	19.158	0.26213	18.528	18.358	18.62	-0.62961					9	5	2	0	0	0	0.17521	1	480	480		12.433	0	1	33347			25886	6008	17402	17412	29556	29556					-0.017118602271693817
LDFEYVINEV	10	Unmodified	_LDFEYVINEV_					0	0	0		ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	620.8067016601562	2	620.808436	1239.60232	-0.56995	-0.00035383	0.40094	0.0002489	-0.16901	-0.00010492	620.8089892457849	59.564	1.2818	59.955	59.441	60.723	0.39077					85	32	5	0	0	0	0.70553	1	6333	6333		44.377	1.5129	1	3018100			25887	3761	17403	17413	29557	29557					-0.007897461418679086
LDFVLISA	8	Unmodified	_LDFVLISA_					0	0	0			REV__ENST00000399722.6_1_18:20513912-20516752:+|nuORF	REV__ENST00000399722.6_1_18:20513912-20516752:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2522277832031	2	439.255111	876.49567	-1.004	-0.000441	-4.1358	-0.0018167	-5.1397	-0.0022576	439.2533238623957	90.673	1.937	91.144	90.644	92.581	0.47068					92	46	3	0	0	0	0.86288	1	10788	10788		26.796	0	1	1078300	+		25888	26235	17404	17414	29558	29558					0.05248168154287214
LDGFFSSIRKE	11	Unmodified	_LDGFFSSIRKE_					0	0	0		ENSG00000117594|ENST00000367027|HSD11B1	ENSG00000117594|ENST00000367027|HSD11B1	ENSG00000117594|ENST00000367027|HSD11B1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.8823547363281	3	433.562827	1297.66665	1.3792	0.00059796	-2.1403	-0.00092794	-0.76109	-0.00032998	433.5620724211311	32.317	0.44801	32.311	32.04	32.488	-0.0061455					14	10	2	0	0	0	0.1767	1	1837	1837		18.531	7.5329	1	41245			25889	2986	17405	17415	29559	29559					0.029724537349238744
LDGGVYYEMV	10	Unmodified	_LDGGVYYEMV_					0	0	0			REV__nc|ENSG00000104936|Q09013-12|DMPK	REV__nc|ENSG00000104936|Q09013-12|DMPK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.2643432617188	2	573.262807	1144.51106	-0.95326	-0.00054647	-2.7522	-0.0015778	-3.7055	-0.0021242	573.2611734366095	36.948	0.53497	36.924	36.636	37.171	-0.023609					27	11	3	0	0	0	0.5766	1	2389	2389		51.335	1.3109	1	145590	+		25890	17489	17406	17416	29560	29560					-0.055413331108638886
LDGIIVLAAVL	11	Unmodified	_LDGIIVLAAVL_					0	0	0		ENSG00000171180|ENST00000641868|OR2M4	ENSG00000171180|ENST00000641868|OR2M4	ENSG00000171180|ENST00000641868|OR2M4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.8507080078125	2	548.85245	1095.69035	-2.6526	-0.0014559	2.9042	0.001594	0.25159	0.00013809	548.8539163476257	40.504	1.0376	40.896	40.377	41.415	0.39209					80	28	4	0	0	0	0.6921	1	3471	3471		32.812	6.1195	1	6533500			25891	6642	17407	17417	29561	29561					0.1463291923939778
LDGQNIYN	8	Unmodified	_LDGQNIYN_					0	0	0		nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;ENSG00000119314|ENST00000374257|PTBP3;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000117569|Q9UKA9-6|PTBP2;nc|ENSG00000119314|O95758-7|PTBP3;ENST00000476419.5_1_1:97187405-97272445:+|nuORF;ENSG00000117569|ENST00000674951|PTBP2;nc|ENSG00000117569|Q9UKA9-2|PTBP2;nc|ENSG00000117569|Q9UKA9-4|PTBP2;nc|ENSG00000117569|Q9UKA9-3|PTBP2;nc|ENSG00000117569|Q9UKA9-5|PTBP2;ENST00000592804.1_1_19:804936-805922:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;ENSG00000011304|ENST00000356948|PTBP1	nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000011304|P26599-1|PTBP1	nc|ENSG00000011304|P26599-1|PTBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.72406005859375	2	468.724707	935.43486	1.545	0.00072417	-4.2552	-0.0019945	-2.7102	-0.0012703	468.7225274565174	99.973	1.2778	100.32	99.78	101.06	0.3473					62	31	3	0	0	0	0.87064	1	12153	12153		29.15	0.89528	1	1356300			25892	14869;787	17408	17418	29562	29562					-0.03543968895951366
LDGTIHKS	8	Unmodified	_LDGTIHKS_					0	0	0			REV__ENST00000345046.10_1_X:152966127-152966343:-|nuORF	REV__ENST00000345046.10_1_X:152966127-152966343:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77801513671875	2	435.737617	869.460681	-0.8581	-0.00037391	0.10925	4.7603E-05	-0.74885	-0.0003263	435.7379472199176	36.218	0.58901	36.162	35.879	36.468	-0.055904					26	12	4	0	0	0	0.4196	1	2395	2395		23.042	1.0826	1	68710	+		25893	25310	17409	17419	29563	29563					0.02072925346340071
LDGVHYLH	8	Unmodified	_LDGVHYLH_					0	0	0		nc|ENSG00000167657|O43293-2|DAPK3;ENSG00000167657|ENST00000545797|DAPK3	nc|ENSG00000167657|O43293-2|DAPK3	nc|ENSG00000167657|O43293-2|DAPK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.8174743652344	2	477.245609	952.476666	-0.89856	-0.00042883	2.8087	0.0013404	1.9101	0.00091159	477.2468240931479	66.252	0.49224	66.382	66.196	66.688	0.12996					28	23	2	0	0	0	0.884	1	5871	5871		33.516	1.5607	1	132290			25894	6313	17410	17420	29564	29564					-0.0014736841677631674
LDGVVKRAVAS	11	Unmodified	_LDGVVKRAVAS_					0	0	0		ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	ENSG00000157881|ENST00000378466|PANK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.8307495117188	2	557.83258	1113.65061	-0.9931	-0.00055398	-2.1796	-0.0012158	-3.1727	-0.0017698	557.83140422783	101.17	1.502	101.2	100.79	102.29	0.031036					74	35	3	0	0	0	0.70737	1	10763	10763		30.318	0	1	902020			25895	5452	17411	17421	29565	29565					0.09832792288693781
LDHLISLS	8	Unmodified	_LDHLISLS_					0	0	0		nc|ENSG00000119402|Q9UKT8-2|FBXW2;ENSG00000119402|ENST00000608872|FBXW2	nc|ENSG00000119402|Q9UKT8-2|FBXW2	nc|ENSG00000119402|Q9UKT8-2|FBXW2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2870788574219	2	449.255643	896.496732	0.19374	8.704E-05	0.19098	8.5797E-05	0.38472	0.00017284	449.25558118010713	19.335	0.40166	18.705	18.49	18.892	-0.62961					15	8	3	0	0	0	0.4196	1	480	480		33.516	1.5607	1	51911			25896	3066	17412	17422	29566	29566					0.04434382523197655
LDHLISLS	8	Unmodified	_LDHLISLS_					0	0	0		nc|ENSG00000119402|Q9UKT8-2|FBXW2;ENSG00000119402|ENST00000608872|FBXW2	nc|ENSG00000119402|Q9UKT8-2|FBXW2	nc|ENSG00000119402|Q9UKT8-2|FBXW2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	449.255643	896.496732	-0.060553	-2.7204E-05	0.19762	8.8783E-05	0.13707	6.1579E-05	449.25542606677857	19.192	0.34135	18.722	18.495	18.836	-0.46967	0.0085473	4.8167E-06	NaN	33.516	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35014			25897	3066	17412	17422							0.04434382523197655
LDHYRKAGVIW	11	Unmodified	_LDHYRKAGVIW_					0	0	0			REV__nc|ENSG00000054983|P54803-5|GALC	REV__nc|ENSG00000054983|P54803-5|GALC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.24884033203125	3	453.250695	1356.73025	0.66324	0.00030061	-3.5662	-0.0016164	-2.903	-0.0013158	453.24905718399623	23.771	1.0969	23.827	23.444	24.541	0.055487					76	30	3	0	0	0	0.59499	1	823	823		45.022	2.6841	1	185360	+		25898	29694	17413	17423	29567	29567					0.06615858962686616
LDIGWQLL	8	Unmodified	_LDIGWQLL_					0	0	0		ENSG00000147416|ENST00000276390|ATP6V1B2	ENSG00000147416|ENST00000276390|ATP6V1B2	ENSG00000147416|ENST00000276390|ATP6V1B2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.9734802246094	2	479.273835	956.533118	-0.54036	-0.00025898	-4.0951	-0.0019627	-4.6354	-0.0022216	479.27137832565893	42.992	0.93315	43.425	43.17	44.103	0.4334					41	22	4	0	0	0	0.4196	1	3887	3887		57.811	9.8957	1	1152200			25899	4900	17414	17424	29568	29568					0.05311259419897851
LDILYLKKTT	10	Unmodified	_LDILYLKKTT_					0	0	0		ENST00000216410.7_1_14:53245033-53245099:-|nuORF	ENST00000216410.7_1_14:53245033-53245099:-|nuORF	ENST00000216410.7_1_14:53245033-53245099:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2472839355469	3	403.248068	1206.72238	-0.18602	-7.5014E-05	-2.7022	-0.0010897	-2.8882	-0.0011647	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.86272	1	11533	11533		23.378	0	1	12308000			25900	9136	17415	17425	29569	29569					0.12728286922538246
LDIREPCVEEF	11	Unmodified	_LDIREPCVEEF_					0	0	0			REV__nc|ENSG00000103723|Q13367-3|AP3B2	REV__nc|ENSG00000103723|Q13367-3|AP3B2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2743225097656	3	450.551711	1348.6333	-0.14099	-6.3524E-05	-1.8491	-0.00083312	-1.9901	-0.00089664	450.5518693245307	93.219	0.61136	93.289	93.013	93.624	0.06987					20	14	2	0	0	0	0.17375	1	9711	9711		30.569	12.736	1	65920	+		25901	17428	17416	17426	29570	29570					-0.027069160992823527
LDISAVVDL	9	Unmodified	_LDISAVVDL_					0	0	0			REV__nc|ENSG00000165240|Q04656-5|ATP7A	REV__nc|ENSG00000165240|Q04656-5|ATP7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.767822265625	2	472.768583	943.522613	0.6034	0.00028527	-3.6875	-0.0017433	-3.0841	-0.0014581	472.7667330259924	81.565	1.9694	81.709	80.825	82.794	0.14352					77	45	2	0	0	0	0.67345	1	7749	7749		42.396	1.618	1	162340	+		25902	21166	17417	17427	29571	29571					0.04859231974796785
LDISAVVDL	9	Unmodified	_LDISAVVDL_					0	0	0			REV__nc|ENSG00000165240|Q04656-5|ATP7A	REV__nc|ENSG00000165240|Q04656-5|ATP7A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	472.768583	943.522613	-0.73702	-0.00034844	-2.3033	-0.0010889	-3.0403	-0.0014373	472.7674478787264	81.5	0.76774	82	81.459	82.227	0.49967	0.23862	0.00027052	NaN	42.396	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188220	+		25903	21166	17417	17427							0.04859231974796785
LDKEIQEYAE	10	Unmodified	_LDKEIQEYAE_					0	0	0			REV__ENST00000459908.5_1_13:113439469-113512287:+|nuORF	REV__ENST00000459908.5_1_13:113439469-113512287:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.26806640625	3	413.203076	1236.5874	-1.284	-0.00053053	0.97236	0.00040178	-0.31159	-0.00012875	413.20350419138344	39.15	0.58585	39.103	38.736	39.322	-0.047001					18	13	2	0	0	0	0.37624	1	2790	2790		42.338	2.4649	1	42820	+		25904	16561	17418	17428	29572	29572					-0.021432380098303838
LDKIDSGR	8	Unmodified	_LDKIDSGR_					0	0	0			REV__nc|ENSG00000257103|Q8ND56-3|LSM14A	REV__nc|ENSG00000257103|Q8ND56-3|LSM14A	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.7469482421875	2	452.248349	902.482145	-1.9602	-0.00088651	0.82173	0.00037162	-1.1385	-0.00051488	452.24863042323005	34.599	0.86904	34.599	34.07	34.939	0					30	22	2	0	0	0	0.4196	1	1863	1863		26.693	0	1	55959	+		25905	23917	17419	17429	29573	29573					0.027003103750644186
LDKKIHSG	8	Unmodified	_LDKKIHSG_					0	0	0		nc|ENSG00000137216|Q5T3F8-3|TMEM63B;ENSG00000137216|ENST00000323267|TMEM63B	nc|ENSG00000137216|Q5T3F8-3|TMEM63B	nc|ENSG00000137216|Q5T3F8-3|TMEM63B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2618713378906	2	449.261259	896.507966	-1.3066	-0.000587	0.0064579	2.9013E-06	-1.3001	-0.0005841	449.2609052127223	72.511	0.72772	72.643	72.306	73.033	0.13145					51	25	3	0	0	0	0.87922	1	6638	6638		31.955	2.8053	1	221400			25906	4181	17420	17430	29574	29574					0.05557204617332445
LDKKQEETA	9	Unmodified	_LDKKQEETA_					0	0	0		ENSG00000169895|ENST00000380155|SYAP1	ENSG00000169895|ENST00000380155|SYAP1	ENSG00000169895|ENST00000380155|SYAP1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.27685546875	2	531.277303	1060.54005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.351	1	76.399	75.899	76.899	0.047981								0	0	0	0.32255	1	7460	7460		44.377	6.869	1				25907	6537	17421	17431	29575	29575					0.01220527509826752
LDLAALYGRL	10	Unmodified	_LDLAALYGRL_					0	0	0		ENSG00000064999|ENST00000360359|ANKS1A;nc|ENSG00000064999|Q92625-2|ANKS1A;ENSG00000185046|ENST00000683438|ANKS1B;nc|ENSG00000185046|Q7Z6G8|ANKS1B	ENSG00000064999|ENST00000360359|ANKS1A;ENSG00000185046|ENST00000683438|ANKS1B	ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.8243408203125	2	552.824224	1103.63389	0.24223	0.00013391	-0.042022	-2.3231E-05	0.20021	0.00011068	552.8240262062169	77.847	0.71408	77.971	77.695	78.409	0.12485					57	23	3	0	0	0	0.37206	1	7329	7329		66.429	7.6473	1	625310			25908	1116;7673	17422	17432	29576	29576					0.08622291402753035
LDLGPLLK	8	Unmodified	_LDLGPLLK_					0	0	0			REV__ENSG00000196549|ENST00000360490|MME	REV__ENSG00000196549|ENST00000360490|MME	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.781005859375	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.6	1	61.153	60.653	61.653	0.55323								0	0	0	0.30045	1	6454	6454		40.573	0	1		+		25909	23144	17423	17433	29577	29577					0.10388447425282266
LDLGTKTH	8	Unmodified	_LDLGTKTH_					0	0	0		ENSG00000007001|ENST00000005756|UPP2;nc|ENSG00000007001|O95045-2|UPP2	ENSG00000007001|ENST00000005756|UPP2	ENSG00000007001|ENST00000005756|UPP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.74456787109375	2	442.745442	883.476331	-1.7989	-0.00079645	0.64724	0.00028656	-1.1517	-0.00050989	442.7455184969909	89.936	0.89783	90.111	89.737	90.635	0.17579					46	20	3	0	0	0	0.90465	1	8941	8941		40.573	0	1	505310			25910	716	17424	17434	29578	29578					0.02993211863383749
LDLKRRVSSSL	11	Unmodified	_LDLKRRVSSSL_					0	0	0		ENST00000434494.5_1_15:44038867-44063413:+|nuORF	ENST00000434494.5_1_15:44038867-44063413:+|nuORF	ENST00000434494.5_1_15:44038867-44063413:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	638.260498046875	2	637.382968	1272.75138	-0.2079	-0.00013251	-2.9992	-0.0019116	-3.2071	-0.0020441	637.3814750295506	81.305	0.40723	81.727	81.55	81.957	0.4215					16	9	2	0	0	0	0.17387	1	9368	9368		23.523	7.8809	1	187080			25911	11696	17425	17435	29579	29579					0.1259182427156702
LDLLLLRPLRL	11	Unmodified	_LDLLLLRPLRL_					0	0	0			REV__ENSG00000168140|ENST00000304735|VASN	REV__ENSG00000168140|ENST00000304735|VASN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	445.6359558105469	3	445.634257	1333.88094	-1.3321	-0.00059364	4.4315	0.0019748	3.0994	0.0013812	445.635969833485	39.605	1.7881	39.562	39.162	40.95	-0.043694					160	44	5	0	0	0	0.79224	1	2858	2858		12.957	0.52465	1	3064400	+		25912	21465	17426	17436	29580	29580					0.22735625621498912
LDLLPELGL	9	Unmodified	_LDLLPELGL_					0	0	0			REV__nc|ENSG00000104936|Q09013-12|DMPK	REV__nc|ENSG00000104936|Q09013-12|DMPK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7955627441406	2	491.794601	981.574648	0.09879	4.8585E-05	2.3098	0.001136	2.4086	0.0011846	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.78058	1	4248	4248		30.504	5.0535	1	1349600	+		25913	17489	17427	17437	29581	29581					0.08312395388554705
LDLLQEKSF	9	Unmodified	_LDLLQEKSF_					0	0	0			REV__ENSG00000077063|ENST00000160373|CTTNBP2	REV__ENSG00000077063|ENST00000160373|CTTNBP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8026733398438	2	546.800414	1091.58628	-1.0996	-0.00060124	0.63427	0.00034682	-0.46529	-0.00025442	546.8005477816228	60.001	0.54956	60.001	59.806	60.355	0					38	22	2	0	0	0	0.47797	1	5238	5238		53.089	8.9722	1	149060	+		25914	16734	17428	17438	29582	29582					0.04414592411899321
LDLNVLAPWSR	11	Unmodified	_LDLNVLAPWSR_					0	0	0		ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3621215820312	2	642.358962	1282.70337	2.6975	0.0017327	2.3103	0.0014841	5.0078	0.0032168	642.3601603180224	112.87	0.9769	112.84	112.65	113.62	-0.024811					46	24	2	0	0	0	0.66929	1	12459	12459		36.447	1.2947	1	12229000			25915	10402	17429	17439	29583	29583					0.0733275035152019
LDLNVLAPWSR	11	Unmodified	_LDLNVLAPWSR_					0	0	0		ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3626708984375	2	642.358962	1282.70337	2.6974	0.0017327	2.0595	0.0013229	4.7569	0.0030556	642.359695370679	114.18	2.3126	114.16	113.46	115.77	-0.024452					163	86	2	0	0	0	0.60058	3	12671	12601;12671;12690		44.377	8.7589	1	464940			25916	10402	17429	17439	29584;29585;29586	29585					0.0733275035152019
LDLNVLAPWSR	11	Unmodified	_LDLNVLAPWSR_					0	0	0		ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.3636474609375	2	642.358962	1282.70337	0.94244	0.00060538	4.3345	0.0027843	5.2769	0.0033897	642.3626446280917	111.26	0.57246	111.33	110.96	111.53	0.069542					80	21	4	0	0	0	0.68532	1	11978	11978		33.922	1.1092	1	3156600			25917	10402	17429	17439	29587	29587					0.0733275035152019
LDLNVLAPWSR	11	Unmodified	_LDLNVLAPWSR_					0	0	0		ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.3587036132812	2	642.358962	1282.70337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.78	1	114.84	114.34	115.34	0.061073								0	0	0	0.56276	1	12262	12262		24.519	1.9395	1				25918	10402	17429	17439	29588	29588					0.0733275035152019
LDLNVLAPWSR	11	Unmodified	_LDLNVLAPWSR_					0	0	0		ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3629150390625	2	642.358962	1282.70337	2.0845	0.001339	4.4555	0.002862	6.54	0.004201	642.361819653108	110.23	1.6844	110.29	109.66	111.35	0.054062					109	58	2	0	0	0	0.45916	1	13407	13407		54.776	1.8396	1	2848100			25919	10402	17429	17439	29589	29589					0.0733275035152019
LDLNVLAPWSR	11	Unmodified	_LDLNVLAPWSR_					0	0	0		ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	ENST00000358079.8_1_22:29924947-29938918:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3624877929688	2	642.358962	1282.70337	2.0883	0.0013414	3.63	0.0023318	5.7183	0.0036732	642.3608064218109	112.21	4.9435	112.24	112.06	117	0.030602					291	230	2	0	0	0	0.51007	2	13832	13832;13901		51.193	14.746	1	12073000			25920	10402	17429	17439	29590;29591	29590					0.0733275035152019
LDLQFGDHII	10	Unmodified	_LDLQFGDHII_					0	0	0		ENSG00000115526|ENST00000264249|CHST10	ENSG00000115526|ENST00000264249|CHST10	ENSG00000115526|ENST00000264249|CHST10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.812255859375	2	585.811313	1169.60807	-0.09269	-5.4299E-05	3.5348	0.0020707	3.4421	0.0020164	585.8133245326358	82.616	1.8039	83.09	82.278	84.082	0.47383					106	43	3	0	0	0	0.60985	1	9638	9638		49.536	1.5765	1	480470			25921	2852	17430	17440	29592	29592					0.030053971604729668
LDLRHWELWIW	11	Unmodified	_LDLRHWELWIW_					0	0	0			REV__ENST00000583562.1_1_17:62500096-62500153:-|nuORF	REV__ENST00000583562.1_1_17:62500096-62500153:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.821533203125	3	522.945383	1565.81432	2.4698	0.0012916	3.0661	0.0016034	5.5359	0.002895	522.9475347004451	107.78	0.15785	107.89	107.74	107.9	0.10396					7	4	2	0	0	0	0.18191	1	13132	13132		3.4087	0	1	428060	+		25922	29029	17431	17441	29593	29593					0.05404390059607067
LDLSLLELA	9	Unmodified	_LDLSLLELA_					0	0	0			REV__nc|ENSG00000126001|Q9BV73-2|CEP250	REV__nc|ENSG00000126001|Q9BV73-2|CEP250	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.7916259765625	2	493.792058	985.569563	0.75109	0.00037088	-0.77615	-0.00038326	-0.025059	-1.2374E-05	493.7915393325102	91.749	1.815	92.199	91.714	93.529	0.44958					108	42	4	0	0	0	0.15928	2	10896	10872;10896		82.305	13.518	1	2387900	+		25923	18690	17432	17442	29594;29595	29595					0.07620091525950556
LDLSVPQRRII	11	Unmodified	_LDLSVPQRRII_					0	0	0			REV__ENST00000538503.5_1_12:121878388-121880774:-|nuORF	REV__ENST00000538503.5_1_12:121878388-121880774:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2677307128906	3	437.269866	1308.78777	-1.6775	-0.00073351	-2.9878	-0.0013065	-4.6653	-0.00204	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.72892	2	4563	4563;4582		26.75	7.6944	1	2305800	+		25924	16961	17433	17443	29596;29597	29596					0.1457270116827658
LDLSVPQRRII	11	Unmodified	_LDLSVPQRRII_					0	0	0			REV__ENST00000538503.5_1_12:121878388-121880774:-|nuORF	REV__ENST00000538503.5_1_12:121878388-121880774:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.267578125	3	437.269866	1308.78777	-0.68964	-0.00030156	-4.0468	-0.0017696	-4.7365	-0.0020711	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.75779	1	4904	4904		20.315	2.4819	1	2651700	+		25925	16961	17433	17443	29598	29598					0.1457270116827658
LDLSVPQRRII	11	Unmodified	_LDLSVPQRRII_					0	0	0			REV__ENST00000538503.5_1_12:121878388-121880774:-|nuORF	REV__ENST00000538503.5_1_12:121878388-121880774:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2679443359375	3	437.269866	1308.78777	-1.5693	-0.00068621	-3.1658	-0.0013843	-4.7351	-0.0020705	437.2683683670783	53.718	2.085	53.765	52.872	54.957	0.047806					225	71	5	0	0	0	0.72374	1	4394	4394		27.644	0.89421	1	2544700	+		25926	16961	17433	17443	29599	29599					0.1457270116827658
LDLSVPQRRII	11	Unmodified	_LDLSVPQRRII_					0	0	0			REV__ENST00000538503.5_1_12:121878388-121880774:-|nuORF	REV__ENST00000538503.5_1_12:121878388-121880774:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2677001953125	3	437.269866	1308.78777	-0.59734	-0.0002612	-4.1797	-0.0018276	-4.777	-0.0020888	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.75457	1	4388	4388		21.032	3.1991	1	2564600	+		25927	16961	17433	17443	29600	29600					0.1457270116827658
LDLTELEF	8	Unmodified	_LDLTELEF_					0	0	0			REV__ENSG00000174004|ENST00000328557|NRROS	REV__ENSG00000174004|ENST00000328557|NRROS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2529602050781	2	490.252766	978.490978	-0.64212	-0.0003148	1.4966	0.00073371	0.85448	0.00041891	490.2543384741196	47.921	0.19971	48.844	48.744	48.944	0.92315					5	4	2	0	0	0	0.4196	1	4601	4601		47.916	0	1	48858	+		25928	21968	17434	17444	29601	29601					0.0008723922086346647
LDLVQQVEAKT	11	Unmodified	_LDLVQQVEAKT_					0	0	0		ENST00000379440.8_2_20:4680886-4680955:+|nuORF	ENST00000379440.8_2_20:4680886-4680955:+|nuORF	ENST00000379440.8_2_20:4680886-4680955:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	622.3465576171875	2	622.34826	1242.68197	0.8786	0.00054679	-2.9185	-0.0018163	-2.0399	-0.0012695	622.346539275879	95.975	2.7711	96.138	95.071	97.843	0.16317					131	65	3	0	0	0	0.57736	1	9851	9851		46.457	5.0302	1	486240			25929	10891	17435	17445	29602	29602					0.07033320532127618
LDLVRTKY	8	Unmodified	_LDLVRTKY_					0	0	0		ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.25811767578125	2	504.297842	1006.58113	0.44183	0.00022281	4.4308	0.0022345	4.8727	0.0024573	504.30031321108174	71.115	0.62083	71.663	71.366	71.987	0.54756					21	14	2	0	0	0	0.4196	1	7919	7919		37.159	0	1	142170			25930	8508	17436	17446	29603	29603					0.0781033333993264
LDMFSEEIK	9	Unmodified	_LDMFSEEIK_					0	0	0		ENSG00000111262|ENST00000382545|KCNA1	ENSG00000111262|ENST00000382545|KCNA1	ENSG00000111262|ENST00000382545|KCNA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.27587890625	2	556.270632	1110.52671	-0.13237	-7.3632E-05	3.7776	0.0021014	3.6452	0.0020277	556.2725648541509	75.526	1.4716	76.09	75.208	76.68	0.56458					64	35	3	0	0	0	0.55097	1	8555	8555		49.442	6.5773	1	518410			25931	2566	17437	17447	29604	29604					-0.024130465938014822
LDMPRLVP	8	Unmodified	_LDMPRLVP_					0	0	0			REV__nc|ENSG00000156475|Q00005-6|PPP2R2B;REV__ENSG00000112182|ENST00000257749|BACH2	REV__ENSG00000112182|ENST00000257749|BACH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7690124511719	2	470.767863	939.521173	-0.85112	-0.00040068	3.3507	0.0015774	2.4995	0.0011767	470.7693717184576	51.01	1.4748	51.018	50.607	52.082	0.0077438					99	42	3	0	0	0	0.89962	1	4390	4390		38.806	3.1879	1	770790	+		25932	20490;17923	17438	17448	29605	29605					0.048993194050581224
LDMPRLVP	8	Unmodified	_LDMPRLVP_					0	0	0			REV__nc|ENSG00000156475|Q00005-6|PPP2R2B;REV__ENSG00000112182|ENST00000257749|BACH2	REV__ENSG00000112182|ENST00000257749|BACH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7688293457031	2	470.767863	939.521173	0.24256	0.00011419	2.3317	0.0010977	2.5742	0.0012119	470.7687464868604	50.117	1.1073	50.962	50.641	51.748	0.84501					94	26	5	0	0	0	0.92457	1	5023	5023		47.916	5.5195	1	10800000	+		25933	20490;17923	17438	17448	29606	29606					0.048993194050581224
LDMYSDMPLPL	11	Unmodified	_LDMYSDMPLPL_					0	0	0			REV__ENSG00000129204|ENST00000574788|USP6	REV__ENSG00000129204|ENST00000574788|USP6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.2555236816406	3	432.206775	1293.5985	2.2629	0.00097803	-3.8235	-0.0016526	-1.5607	-0.00067453	432.20488228046963	26.698	0.45305	26.358	26.096	26.549	-0.34035					13	9	3	0	0	0	0.1767	1	1519	1519		18.531	2.5243	1	21437	+		25934	18810	17439	17449	29607	29607					-0.036558752315613674
LDNGDHNANG	10	Unmodified	_LDNGDHNANG_					0	0	0			REV__ENSG00000125966|ENST00000246186|MMP24	REV__ENSG00000125966|ENST00000246186|MMP24	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.2193603515625	2	513.715402	1025.41625	0.50797	0.00026095	-4.4169	-0.002269	-3.9089	-0.0020081	513.713205499416	30.788	1.5598	30.792	30.054	31.614	0.0037212					53	35	2	0	0	0	0.37624	1	1989	1989		29.17	8.2231	1	128530	+		25935	18686	17440	17450	29608	29608					-0.09544130537824458
LDNYTITFL	9	Unmodified	_LDNYTITFL_					0	0	0		ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.747802734375	2	550.28714	1098.55973	-0.048067	-2.6451E-05	3.4342	0.0018898	3.3862	0.0018634	550.2892691818249	58.432	0.25208	58.985	58.837	59.089	0.55323					7	5	2	0	0	0	0.20789	1	6121	6121		26.693	13.239	1	82255			25936	3770	17441	17451	29609	29609					0.01438903520556778
LDPDNETYKSN	11	Unmodified	_LDPDNETYKSN_					0	0	0		ENSG00000104969|ENST00000221566|SGTA	ENSG00000104969|ENST00000221566|SGTA	ENSG00000104969|ENST00000221566|SGTA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3931884765625	2	648.291139	1294.56773	-0.0023377	-1.5155E-06	-0.19359	-0.0001255	-0.19593	-0.00012702	648.2921618278148	107.46	0.49133	107.43	107.12	107.62	-0.034409					13	11	2	0	0	0	0.16675	1	11697	11697		26.063	0	1	67215			25937	2174	17442	17452	29610	29610					-0.06777614020597866
LDPFDSEEL	9	Unmodified	_LDPFDSEEL_					0	0	0		nc|ENSG00000070047|Q9P1Y6-3|PHRF1	nc|ENSG00000070047|Q9P1Y6-3|PHRF1	nc|ENSG00000070047|Q9P1Y6-3|PHRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.7440185546875	2	532.742762	1063.47097	-0.13918	-7.4145E-05	0.29225	0.0001557	0.15308	8.1551E-05	532.742745424186	66.196	0.59277	66.748	66.485	67.078	0.55131					35	15	3	0	0	0	0.76255	1	7248	7248		35.618	0	1	285220			25938	14773	17443	17453	29611	29611					-0.05822556509747301
LDPIKVKLQSA	11	Unmodified	_LDPIKVKLQSA_					0	0	0			REV__ENSG00000163288|ENST00000295454|GABRB1	REV__ENSG00000163288|ENST00000295454|GABRB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	606.3732299804688	2	606.371538	1210.72852	-0.28087	-0.00017031	-2.9829	-0.0018087	-3.2638	-0.0019791	606.369636454931	94.737	2.9757	94.737	93.326	96.302	0					126	69	2	0	0	0	0.75906	1	9315	9315		20.03	0.033703	1	318720	+		25939	20893	17444	17454	29612	29612					0.13158805154080255
LDPKFPQH	8	Unmodified	_LDPKFPQH_					0	0	0			REV__ENSG00000062370|ENST00000354340|ZNF112	REV__ENSG00000062370|ENST00000354340|ZNF112	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.2633056640625	2	491.261259	980.507966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.633	1	66.766	66.266	67.266	0.13326								0	0	0	0.29498	1	5919	5919		26.796	0	1		+		25940	16461	17445	17455	29613	29613					0.016932046173337767
LDPLLTAGLVR	11	Unmodified	_LDPLLTAGLVR_					0	0	0			REV__ENST00000531486.1_1_17:45681241-45696545:+|nuORF	REV__ENST00000531486.1_1_17:45681241-45696545:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.3567504882812	2	584.358431	1166.70231	-0.075702	-4.4237E-05	-4.1912	-0.0024491	-4.2669	-0.0024934	584.3560423589818	92.438	3.1079	92.483	91.102	94.21	0.045448					194	73	3	0	0	0	0.67778	1	9693	9693		35.152	5.982	1	588330	+		25941	19669	17446	17456	29614	29614					0.1256253598260173
LDPPLLAS	8	Unmodified	_LDPPLLAS_					0	0	0			REV__ENST00000312655.8_1_17:57430604-57430868:+|nuORF	REV__ENST00000312655.8_1_17:57430604-57430868:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2374267578125	2	413.239461	824.46437	-1.8341	-0.00075793	0.52075	0.00021519	-1.3134	-0.00054274	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.884	1	6918	6918		33.516	0	1	2012200	+		25942	24916	17447	17457	29615	29615					0.045115951201864846
LDPPSGTPPQ	10	Unmodified	_LDPPSGTPPQ_					0	0	0		ENSG00000166987|ENST00000355673|MBD6	ENSG00000166987|ENST00000355673|MBD6	ENSG00000166987|ENST00000355673|MBD6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34796142578125	2	504.753464	1007.49238	0.29022	0.00014649	-0.31073	-0.00015684	-0.020506	-1.035E-05	504.7530839179589	36.355	0.33768	36.636	36.511	36.849	0.28173					15	7	3	0	0	0	0.37624	1	2837	2837		16.007	0	1	104280			25943	6258	17448	17458	29616	29616					-0.011071266903741162
LDPQEGCPDG	10	Unmodified	_LDPQEGCPDG_					0	0	0			REV__ENSG00000196453|ENST00000247930|ZNF777	REV__ENSG00000196453|ENST00000247930|ZNF777	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.7059936523438	2	515.710939	1029.40732	0.035209	1.8157E-05	-3.2775	-0.0016903	-3.2423	-0.0016721	515.7091283131688	29.984	0.87046	29.941	29.555	30.426	-0.043095					44	19	3	0	0	0	0.74274	1	1655	1655		42.396	6.7778	1	395650	+		25944	23134	17449	17459	29617	29617					-0.10620240218509025
LDPSLILPPPP	11	Unmodified	_LDPSLILPPPP_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4;REV__ENSG00000214929|ENST00000344803|SPATA31D1	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	579.8438110351562	2	579.842082	1157.66961	-0.30572	-0.00017727	3.2826	0.0019034	2.9769	0.0017261	579.8442285460155	102.54	1.4926	102.54	101.62	103.11	0					80	37	4	0	0	0	0.72918	1	10490	10490		26.693	1.1189	1	838830	+		25945	22878;23668	17450	17460	29618	29618					0.09708328859755966
LDPSLILPPPP	11	Unmodified	_LDPSLILPPPP_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4;REV__ENSG00000214929|ENST00000344803|SPATA31D1	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.8441162109375	2	579.842082	1157.66961	-0.90191	-0.00052297	4.456	0.0025838	3.5541	0.0020608	579.8446027793001	102.43	1.6108	102.45	102.08	103.69	0.01989					83	39	4	0	0	0	0.7342	1	10994	10994		25.574	1.0549	1	1265800	+		25946	22878;23668	17450	17460	29619	29619					0.09708328859755966
LDPSSEAQP	9	Unmodified	_LDPSSEAQP_					0	0	0		ENST00000431802.5_1_2:219524622-219524778:+|nuORF	ENST00000431802.5_1_2:219524622-219524778:+|nuORF	ENST00000431802.5_1_2:219524622-219524778:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2220458984375	2	472.221997	942.429441	0.21504	0.00010155	-0.092078	-4.3481E-05	0.12296	5.8067E-05	472.2219574332987	38.584	0.60174	38.678	38.396	38.997	0.094322					38	18	3	0	0	0	0.15959	1	2299	2299		82.241	10.363	1	210410			25947	11654	17451	17461	29620	29620					-0.044076924784235416
LDPSSEAQP	9	Unmodified	_LDPSSEAQP_					0	0	0		ENST00000431802.5_1_2:219524622-219524778:+|nuORF	ENST00000431802.5_1_2:219524622-219524778:+|nuORF	ENST00000431802.5_1_2:219524622-219524778:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	472.221997	942.429441	-1.1409	-0.00053875	3.1834	0.0015033	2.0425	0.0009645	472.2241754935764	38.782	0.27024	38.735	38.511	38.781	-0.047005	0.023071	0.0024833	NaN	82.241	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14510			25948	11654	17451	17461							-0.044076924784235416
LDPTLRPRRG	10	Unmodified	_LDPTLRPRRG_					0	0	0			REV__nc|ENSG00000115317|O43464-2|HTRA2	REV__nc|ENSG00000115317|O43464-2|HTRA2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.866455078125	2	590.849096	1179.68364	-0.77529	-0.00045808	2.2416	0.0013244	1.4663	0.00086636	590.8500645709088	103.41	0.11604	103.45	103.4	103.51	0.041481					4	2	2	0	0	0	0.37624	1	11214	11214		36.447	0	1	370760	+		25949	18109	17452	17462	29621	29621					0.10098419131418268
LDQDHVAVLG	10	Unmodified	_LDQDHVAVLG_					0	0	0		ENSG00000130935|ENST00000253247|NOL11;ENST00000580914.1_1_17:65720296-65722769:+|nuORF	ENSG00000130935|ENST00000253247|NOL11	ENSG00000130935|ENST00000253247|NOL11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.7785034179688	2	533.780013	1065.54547	-1.2075	-0.00064456	0.94349	0.00050362	-0.26404	-0.00014094	533.7804679884944	38.458	0.64214	38.47	38.207	38.849	0.011173					26	14	2	0	0	0	0.86348	1	2643	2643		31.53	2.3598	1	150630			25950	3696	17453	17463	29622	29622					0.015322510922715082
LDQDRDFTS	9	Unmodified	_LDQDRDFTS_					0	0	0			REV__ENSG00000166482|ENST00000299610|MFAP4	REV__ENSG00000166482|ENST00000299610|MFAP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.748779296875	2	548.74891	1095.48327	0.25472	0.00013977	-0.17511	-9.609E-05	0.079609	4.3685E-05	548.7486872992919	53.73	0.90979	53.753	53.357	54.267	0.022541					60	24	4	0	0	0	0.30689	1	4735	4735		64.207	7.4862	1	884920	+		25951	21298	17454	17464	29623	29623					-0.06065520046695383
LDQFADVRL	9	Unmodified	_LDQFADVRL_					0	0	0			REV__nc|ENSG00000145147|O94813-3|SLIT2	REV__nc|ENSG00000145147|O94813-3|SLIT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.79150390625	2	538.790381	1075.56621	0.47129	0.00025393	-2.3485	-0.0012653	-1.8772	-0.0010114	538.7897027223852	59.807	0.41387	59.924	59.754	60.168	0.11676					19	14	2	0	0	0	0.71772	1	5165	5165		39.253	4.0521	1	131220	+		25952	19927	17455	17465	29624	29624					0.03144841471953441
LDQLCWQT	8	Unmodified	_LDQLCWQT_					0	0	0			REV__ENST00000462439.5_1_3:49712681-49713134:+|nuORF	REV__ENST00000462439.5_1_3:49712681-49713134:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34521484375	2	503.73676	1005.45897	-0.76888	-0.00038731	-2.7171	-0.0013687	-3.486	-0.001756	503.7353654992126	56.587	0.73561	56.984	56.72	57.456	0.39672					32	16	3	0	0	0	0.4196	1	5852	5852		58.782	21.623	1	307040	+		25953	27054	17456	17466	29625	29625					-0.04354451733934184
LDRALNCY	8	Unmodified	_LDRALNCY_					0	0	0			REV__ENSG00000183111|ENST00000333677|ARHGEF37	REV__ENSG00000183111|ENST00000333677|ARHGEF37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2347717285156	2	484.236927	966.459301	-1.0641	-0.00051528	-0.85776	-0.00041536	-1.9219	-0.00093064	484.2366198797029	86.871	1.6056	87.325	87.019	88.625	0.45429					96	38	4	0	0	0	0.90523	1	10309	10309		40.778	0.20554	1	9271700	+		25954	22577	17457	17467	29626	29626					-0.025270320140975855
LDRANSLLNQT	11	Unmodified	_LDRANSLLNQT_					0	0	0		nc|ENSG00000083535|Q8WXW3-2|PIBF1;ENSG00000083535|ENST00000326291|PIBF1	nc|ENSG00000083535|Q8WXW3-2|PIBF1	nc|ENSG00000083535|Q8WXW3-2|PIBF1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.83349609375	2	622.833308	1243.65206	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.947	1	98.947	98.447	99.447	0								0	0	0	0.56276	1	9977	9977		27.047	4.4677	1				25955	1502	17458	17468	29627	29627					0.039983815868026795
LDRCPPPA	8	Unmodified	_LDRCPPPA_					0	0	0		ENST00000361961.7_1_12:39764061-39837002:-|nuORF	ENST00000361961.7_1_12:39764061-39837002:-|nuORF	ENST00000361961.7_1_12:39764061-39837002:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7802429199219	2	434.720913	867.427273	1.6198	0.00070416	1.0502	0.00045653	2.67	0.0011607	434.7204937950436	36.616	0.40898	37.056	36.829	37.238	0.44043					14	9	2	0	0	0	0.4196	1	2888	2888		30.504	5.0535	1	67405			25956	10497	17459	17469	29628	29628					-0.011743996972313653
LDRDDGAKKV	10	Unmodified	_LDRDDGAKKV_					0	0	0		ENSG00000164690|ENST00000297261|SHH	ENSG00000164690|ENST00000297261|SHH	ENSG00000164690|ENST00000297261|SHH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.8036499023438	2	558.80402	1115.59349	-0.88613	-0.00049517	0.48242	0.00026958	-0.40371	-0.0002256	558.8042328855727	49.413	0.70857	49.41	49.092	49.8	-0.0030365					32	15	3	0	0	0	0.64457	1	4127	4127		47.657	4.7931	1	301140			25957	5990	17460	17470	29629	29629					0.040313250123290345
LDRETKSEY	9	Unmodified	_LDRETKSEY_					0	0	0		nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;nc|ENSG00000107736|Q9H251-6|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.7782592773438	2	570.78021	1139.54587	1.1603	0.00066225	-1.0197	-0.000582	0.1406	8.0251E-05	570.7794700070763	24.905	0.78845	24.868	24.536	25.325	-0.037178					40	18	3	0	0	0	0.35373	1	933	933		60.972	7.6205	1	146700			25958	2362	17461	17471	29630	29630					-0.0183237397850462
LDRHGQTA	8	Unmodified	_LDRHGQTA_					0	0	0		ENSG00000069399|ENST00000164227|BCL3;ENST00000403534.7_1_19:45250964-45261799:+|nuORF	ENSG00000069399|ENST00000164227|BCL3	ENSG00000069399|ENST00000164227|BCL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2325744628906	2	449.230491	896.446428	0.59617	0.00026782	-0.42374	-0.00019036	0.17243	7.7459E-05	449.2302610410389	83.151	3.4859	83.298	82.027	85.513	0.14694					178	80	3	0	0	0	0.88601	1	8029	8029		34.173	2.2177	1	225870			25959	1219	17462	17472	29631	29631					-0.005937270819458718
LDRILPPLHII	11	Unmodified	_LDRILPPLHII_					0	0	0			REV__nc|ENSG00000145103|Q86SU0-5|ILDR1	REV__nc|ENSG00000145103|Q86SU0-5|ILDR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801513671875	3	433.943091	1298.80744	1.4293	0.00062022	0.043221	1.8756E-05	1.4725	0.00063898	433.94284081354306	34.102	0.65944	34.407	33.994	34.653	0.30495					31	15	3	0	0	0	0.17243	1	2533	2533		17.167	0	1	92982	+		25960	19926	17463	17473	29632	29632					0.16999077179048072
LDRLFRMV	8	Unmodified	_LDRLFRMV_					0	0	0			REV__nc|ENSG00000064419|Q9Y5L0-5|TNPO3	REV__nc|ENSG00000064419|Q9Y5L0-5|TNPO3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7817993164062	2	525.299862	1048.58517	-0.74908	-0.00039349	-2.0122	-0.001057	-2.7612	-0.0014505	525.7997171256184	47.382	0.30405	48.305	48.238	48.542	0.92315					9	7	2	0	0	0	0.4196	1	4562	4562		37.159	16.212	1	609880	+		25961	16477	17464	17474	29633	29633					0.06282099562031362
LDRLHLQRN	9	Unmodified	_LDRLHLQRN_					0	0	0		ENST00000350878.8_1_2:102440511-102446033:+|nuORF	ENST00000350878.8_1_2:102440511-102446033:+|nuORF	ENST00000350878.8_1_2:102440511-102446033:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.8331298828125	2	582.833446	1163.65234	-1.3452	-0.00078404	-0.0031547	-1.8387E-06	-1.3484	-0.00078588	582.8334573704366	94.259	3.5437	94.457	93.113	96.657	0.19827					191	84	3	0	0	0	0.78058	1	9604	9604		30.504	3.8107	1	775360			25962	10322	17465	17475	29634	29634					0.07705846097337599
LDRLKDELS	9	Unmodified	_LDRLKDELS_					0	0	0		ENST00000431657.5_1_3:44409097-44442080:+|nuORF;nc|ENSG00000179152|Q8N3R3-4|TCAIM;ENSG00000179152|ENST00000342649|TCAIM	ENST00000431657.5_1_3:44409097-44442080:+|nuORF	ENST00000431657.5_1_3:44409097-44442080:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.8006591796875	2	544.800946	1087.58734	-0.15846	-8.6328E-05	-0.67191	-0.00036606	-0.83036	-0.00045238	544.8004802081173	45.113	0.87101	45.082	44.797	45.668	-0.031067					44	19	3	0	0	0	0.096131	1	3659	3659		93.195	10.445	1	1546100			25963	7250	17466	17476	29635	29635					0.04704806780819126
LDRLPGQKEA	10	Unmodified	_LDRLPGQKEA_					0	0	0		ENST00000535493.5_1_2:240016681-240219867:-|nuORF;ENST00000493582.5_1_2:240016681-240274403:-|nuORF;ENST00000463007.5_1_2:240011659-240219867:-|nuORF;nc|ENSG00000068024|P56524-2|HDAC4;nc|ENSG00000068024|P56524|HDAC4;ENSG00000068024|ENST00000543185|HDAC4	ENST00000535493.5_1_2:240016681-240219867:-|nuORF	ENST00000535493.5_1_2:240016681-240219867:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.8187866210938	2	563.814387	1125.61422	0.4108	0.00023161	4.4343	0.0025001	4.845	0.0027317	563.8167084474933	53.74	1.0262	53.763	53.411	54.438	0.022541					39	28	2	0	0	0	0.86621	1	4727	4727		26.063	2.5407	1	133250			25964	1193	17467	17477	29636	29636					0.056439153920109675
LDRLVREVGPE	11	Unmodified	_LDRLVREVGPE_					0	0	0			REV__ENST00000583850.5_1_17:7127146-7127844:+|nuORF	REV__ENST00000583850.5_1_17:7127146-7127844:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8601684570312	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.69995	1	13072	13072		31.53	0	1	27133000	+		25965	16655	17468	17478	29637	29637					0.07451545000549231
LDRPGPKP	8	Unmodified	_LDRPGPKP_					0	0	0		ENST00000381181.1_1_21:35321252-35321396:+|nuORF	ENST00000381181.1_1_21:35321252-35321396:+|nuORF	ENST00000381181.1_1_21:35321252-35321396:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.25518798828125	2	440.255977	878.497401	0.25826	0.0001137	-1.4885	-0.00065531	-1.2302	-0.00054161	440.2551628141125	62.575	1.3839	63.129	62.257	63.641	0.5545					72	31	3	0	0	0	0.8621	1	6699	6699		26.693	3.6504	1	690880			25966	10946	17469	17479	29638	29638					0.05329221962904285
LDRPLHLKR	9	Unmodified	_LDRPLHLKR_					0	0	0			REV__ENSG00000141371|ENST00000269127|CHCT1	REV__ENSG00000141371|ENST00000269127|CHCT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3577880859375	2	574.356557	1146.69856	-1.3728	-0.00078849	0.24135	0.00013862	-1.1315	-0.00064987	574.3566305310679	99.909	3.0439	100.08	98.131	101.18	0.17199					143	70	3	0	0	0	0.78983	1	10384	10384		27.882	7.0451	1	243780	+		25967	19677	17470	17480	29639	29639					0.13107910999428896
LDRPRALVLV	10	Unmodified	_LDRPRALVLV_					0	0	0		ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3692016601562	2	576.36659	1150.71863	0.21884	0.00012613	3.6231	0.0020883	3.842	0.0022144	576.3685004407081	43.385	1.6048	43.335	42.606	44.211	-0.050308					89	39	3	0	0	0	0.8651	1	2951	2951		25.574	4.6271	1	327130			25968	4219	17471	17481	29640	29640					0.14929661939368088
LDRRLILMET	10	Unmodified	_LDRRLILMET_					0	0	0		ENST00000521308.5_1_5:150563000-150603580:-|nuORF;ENSG00000198624|ENST00000355417|CCDC69	ENST00000521308.5_1_5:150563000-150603580:-|nuORF	ENST00000521308.5_1_5:150563000-150603580:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.57501220703125	3	420.57619	1258.70674	-0.42349	-0.00017811	-1.591	-0.00066915	-2.0145	-0.00084726	420.5754266268904	46.91	0.91414	46.822	46.39	47.304	-0.087646					74	26	4	0	0	0	0.86446	1	3490	3490		30.569	1.3988	1	1050400			25969	8296	17472	17482	29641	29641					0.08773677133876845
LDRSRPAV	8	Unmodified	_LDRSRPAV_					0	0	0		ENSG00000038210|ENST00000264864|PI4K2B	ENSG00000038210|ENST00000264864|PI4K2B	ENSG00000038210|ENST00000264864|PI4K2B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79315185546875	2	457.264333	912.514114	-0.027647	-1.2642E-05	0.55523	0.00025389	0.52758	0.00024124	457.264641227359	36.806	0.53479	36.788	36.553	37.087	-0.018677					17	11	2	0	0	0	0.4196	1	2404	2404		53.351	0	1	43022			25970	912	17473	17483	29642	29642					0.05435722848858404
LDRTLALVY	9	Unmodified	_LDRTLALVY_					0	0	0		nc|ENSG00000176510|Q8NH08|OR10AC1	nc|ENSG00000176510|Q8NH08|OR10AC1	nc|ENSG00000176510|Q8NH08|OR10AC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.3109741210938	2	532.310949	1062.60735	0.11151	5.9358E-05	0.1137	6.0526E-05	0.22521	0.00011988	532.3108990448857	71.661	0.65193	71.702	71.403	72.055	0.040222					44	27	2	0	0	0	0.71772	1	6883	6883		39.253	0	1	184820			25971	15113	17474	17484	29643	29643					0.07854602511406483
LDRTLKTGF	9	Unmodified	_LDRTLKTGF_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3600463867188	2	525.800749	1049.58694	1.5871	0.00083451	3.5048	0.0018428	5.0919	0.0026773	525.8019233093429	36.547	0.20372	36.987	36.829	37.033	0.44043					5	4	2	0	0	0	0.20789	1	2872	2872		51.335	3.6781	1	21732			25972	13182	17475	17485	29644	29644					0.06413431851638052
LDRTVARRWKP	11	Unmodified	_LDRTVARRWKP_					0	0	0		ENST00000354300.4_1_12:110971622-110971877:-|nuORF	ENST00000354300.4_1_12:110971622-110971877:-|nuORF	ENST00000354300.4_1_12:110971622-110971877:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.608642578125	3	466.608993	1396.80515	-1.7237	-0.0008043	-0.48378	-0.00022574	-2.2075	-0.00103	466.60870138635494	100.22	2.0707	100.39	99.305	101.38	0.17199					124	48	3	0	0	0	0.74771	1	10462	10462		22.562	2.5311	1	463800			25973	10334	17476	17486	29645	29645					0.12262041493909237
LDSALLGR	8	Unmodified	_LDSALLGR_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.748779296875	2	422.747985	843.481417	-0.20437	-8.6395E-05	0.68437	0.00028932	0.48001	0.00020292	422.74813074014963	38.612	0.69627	38.954	38.577	39.273	0.34187					34	16	3	0	0	0	0.3646	1	3191	3191		85.359	5.9085	1	299310	+		25974	21390	17477	17487	29646	29646					0.05341515726013313
LDSALLGR	8	Unmodified	_LDSALLGR_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	422.747985	843.481417	0.065863	2.7843E-05	1.137	0.00048067	1.2029	0.00050851	422.7483277007787	39.202	1.0115	39.172	38.718	39.729	-0.030273	0.10086	0.0013987	NaN	85.359	46	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	286370	+		25975	21390	17477	17487							0.05341515726013313
LDSALLGR	8	Unmodified	_LDSALLGR_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	422.747985	843.481417	-1.8391	-0.00077746	-3.6701	-0.0015515	-5.5092	-0.002329	422.74860372698697	39.134	0.18829	39.144	39.01	39.198	0.010708	0.073059	-0.0026657	NaN	85.359	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26350	+		25976	21390	17477	17487							0.05341515726013313
LDSALLGR	8	Unmodified	_LDSALLGR_					0	0	0			REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	REV__nc|ENSG00000167491|Q86YP4-2|GATAD2A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	422.747985	843.481417	-0.20437	-8.6395E-05	0.68437	0.00028932	0.48001	0.00020292	422.74813074014963	38.612	0.69627	38.954	38.577	39.273	0.34187	-0.11738	0.001016	NaN	85.359	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299310	+		25977	21390	17477	17487							0.05341515726013313
LDSISEVDML	10	Unmodified	_LDSISEVDML_					0	0	0		ENST00000602808.1_1_6:89980180-90024845:-|nuORF	ENST00000602808.1_1_6:89980180-90024845:-|nuORF	ENST00000602808.1_1_6:89980180-90024845:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.2767333984375	2	561.273372	1120.53219	-0.70631	-0.00039644	-1.1811	-0.00066292	-1.8874	-0.0010594	561.2727641821044	91.589	0.51191	92.052	91.765	92.277	0.46249					27	11	3	0	0	0	0.37624	1	10921	10921		34.173	0	1	300570			25978	14416	17478	17488	29647	29647					-0.023253678019727886
LDSPLAWERSG	11	Unmodified	_LDSPLAWERSG_					0	0	0			REV__ENST00000369797.7_1_10:105205663-105205864:+|nuORF	REV__ENST00000369797.7_1_10:105205663-105205864:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.9193725585938	2	615.809302	1229.60405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.3	1	46.316	45.816	46.816	0.015514								0	0	0	0.56276	1	3391	3391		27.047	0.3544	1		+		25979	25631	17479	17489	29648	29648					-0.001566923332575243
LDSSGQIVY	9	Unmodified	_LDSSGQIVY_					0	0	0			REV__ENSG00000165124|ENST00000374469|SVEP1	REV__ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2482604980469	2	491.248015	980.481476	-0.35827	-0.000176	0.36076	0.00017722	0.002487	1.2217E-06	491.2480641110002	49.675	0.86356	50.134	49.789	50.653	0.45983					42	20	3	0	0	0	0.25483	2	4861	4839;4861		68.787	8.6728	1	1413100	+		25980	21151	17480	17490	29649;29650	29650					-0.009545290646656213
LDSSSILY	8	Unmodified	_LDSSSILY_					0	0	0		ENST00000546932.5_1_12:72265915-72278641:+|nuORF;ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15	ENST00000546932.5_1_12:72265915-72278641:+|nuORF	ENST00000546932.5_1_12:72265915-72278641:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2309875488281	2	449.231833	896.449113	0.61452	0.00027606	-3.3974	-0.0015262	-2.7829	-0.0012502	449.2302672922752	83.471	4.8977	83.402	80.905	85.803	-0.069313					227	113	3	0	0	0	0.91005	1	8452	8452		42.474	7.2737	1	260170			25981	3195	17481	17491	29651	29651					-0.003253164676607412
LDSVLVFKKG	10	Unmodified	_LDSVLVFKKG_					0	0	0		ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.330322265625	2	553.334424	1104.6543	-0.75754	-0.00041917	-2.8743	-0.0015905	-3.6319	-0.0020096	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.85981	1	10398	10398		35.152	6.0025	1	4355400			25982	6488	17482	17492	29652	29652					0.10615462062582992
LDTIDKSTMD	10	Unmodified	_LDTIDKSTMD_					0	0	0		nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1	nc|ENSG00000064726|Q9H0C5-2|BTBD1	nc|ENSG00000064726|Q9H0C5-2|BTBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.7664794921875	2	569.768454	1137.52235	0.50788	0.00028938	-3.4251	-0.0019515	-2.9172	-0.0016621	569.7663611831885	60.525	0.47499	60.641	60.356	60.831	0.11676					53	19	3	0	0	0	0.76096	1	5251	5251		41.427	2.1738	1	513000			25983	1111	17483	17493	29653	29653					-0.04090555807351848
LDTSRSPMLL	10	Unmodified	_LDTSRSPMLL_					0	0	0			REV__ENSG00000100167|ENST00000644076|SEPTIN3	REV__ENSG00000100167|ENST00000644076|SEPTIN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.8054809570312	2	566.805174	1131.59579	-0.52899	-0.00029983	0.92267	0.00052297	0.39368	0.00022314	566.8055131198089	62.726	2.3736	63.113	62.36	64.733	0.38779					117	54	3	0	0	0	0.63899	1	6827	6827		47.96	5.0953	1	633890	+		25984	17147	17484	17494	29654	29654					0.03526037425785944
LDTVYLYKL	9	Unmodified	_LDTVYLYKL_					0	0	0			REV__ENSG00000164002|ENST00000415550|EXO5	REV__ENSG00000164002|ENST00000415550|EXO5	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	564.3104248046875	2	564.320983	1126.62741	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.008	1	57.041	56.541	57.541	0.033184								0	0	0	0.28772	1	5171	5171		35.618	2.8059	1		+		25985	21007	17485	17495	29655	29655					0.06916353451356372
LDVESRSKL	9	Unmodified	_LDVESRSKL_					0	0	0			REV__nc|ENSG00000100938|Q9P2T1-3|GMPR2	REV__nc|ENSG00000100938|Q9P2T1-3|GMPR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7999877929688	2	523.795663	1045.57677	0.97169	0.00050897	2.3152	0.0012127	3.2869	0.0017217	523.7967666543079	54.527	1.0907	54.933	54.361	55.452	0.40663					48	25	4	0	0	0	0.26953	1	5554	5554		67.494	6.5217	1	3204000	+		25986	29741	17486	17496	29656	29656					0.055808241263775926
LDVESRSKL	9	Unmodified	_LDVESRSKL_					0	0	0			REV__nc|ENSG00000100938|Q9P2T1-3|GMPR2	REV__nc|ENSG00000100938|Q9P2T1-3|GMPR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7999267578125	2	523.795663	1045.57677	-0.28962	-0.0001517	3.831	0.0020067	3.5414	0.001855	523.7974613692369	54.313	0.87762	54.898	54.543	55.421	0.58474					50	20	4	0	0	0	0.33718	1	5550	5550		62.107	3.3255	1	3443700	+		25987	29741	17486	17496	29657	29657					0.055808241263775926
LDVFSFDN	8	Unmodified	_LDVFSFDN_					0	0	0			REV__nc|ENSG00000135945|Q9UBZ9-3|REV1	REV__nc|ENSG00000135945|Q9UBZ9-3|REV1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.29437255859375	2	478.721633	955.428712	-0.39094	-0.00018715	-3.9409	-0.0018866	-4.3319	-0.0020738	478.7196807022956	58.416	0.79393	58.808	58.44	59.234	0.39209					23	18	2	0	0	0	0.4196	1	6172	6172		37.159	5.6293	1	142610	+		25988	19272	17487	17497	29658	29658					-0.05078487127468634
LDVISALIL	9	Unmodified	_LDVISALIL_					0	0	0		ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8058166503906	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.78536	2	2428	2428;2571		29.15	2.3535	1	336090			25989	3152	17488	17498	29659;29660	29659					0.11580985768239316
LDVISALIL	9	Unmodified	_LDVISALIL_					0	0	0		ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80609130859375	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.78536	1	2947	2947		29.15	2.3535	1	371600			25990	3152	17488	17498	29661	29661					0.11580985768239316
LDVISALIL	9	Unmodified	_LDVISALIL_					0	0	0		ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8056335449219	2	478.804968	955.595384	-1.2024	-0.0005757	4.0232	0.0019263	2.8208	0.0013506	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.64922	1	2796	2796		44.117	13.613	1	361300			25991	3152	17488	17498	29662	29662					0.11580985768239316
LDVKNLVLVLA	11	Unmodified	_LDVKNLVLVLA_					0	0	0			REV__nc|ENSG00000204590|P36915-2|GNL1	REV__nc|ENSG00000204590|P36915-2|GNL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.8820190429688	2	598.884281	1195.75401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.616	1	42.616	42.116	43.116	0								0	0	0	0.56276	1	2967	2967		14.865	0	1		+		25992	23507	17489	17499	29663	29663					0.16396279676519043
LDVLLLGSV	9	Unmodified	_LDVLLLGSV_					0	0	0		ENSG00000167646|ENST00000524407|DNAAF3;nc|ENSG00000167646|Q8N9W5-6|DNAAF3;nc|ENSG00000167646|Q8N9W5-3|DNAAF3;nc|ENSG00000167646|Q8N9W5-5|DNAAF3	ENSG00000167646|ENST00000524407|DNAAF3	ENSG00000167646|ENST00000524407|DNAAF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.791259765625	2	464.789318	927.564084	0.1718	7.9849E-05	2.8678	0.0013329	3.0395	0.0014127	464.7905115336865	34.402	1.3055	34.346	33.931	35.236	-0.055149					140	57	3	0	0	0	0.7932	1	1747	1747		23.042	0	1	289420			25993	6312	17490	17500	29664	29664					0.09740412734140591
LDVLLTIVA	9	Unmodified	_LDVLLTIVA_					0	0	0		nc|ENSG00000164818|Q86Y56-2|DNAAF5;ENSG00000164818|ENST00000297440|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8059387207031	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.78058	1	2509	2509		30.504	5.0535	1	336090			25994	6006	17491	17501	29665	29665					0.11580985768239316
LDVLRPLSIQN	11	Unmodified	_LDVLRPLSIQN_					0	0	0			REV__nc|ENSG00000110442|Q9P000-2|COMMD9	REV__nc|ENSG00000110442|Q9P000-2|COMMD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.375732421875	2	634.372069	1266.72959	6.6614	0.0042258	1.1149	0.00070728	7.7763	0.0049331	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.72106	1	13406	13406		28.081	2.5074	1	7041100	+		25995	17815	17492	17502	29666	29666					0.10689019523010757
LDVNLLGVI	9	Unmodified	_LDVNLLGVI_					0	0	0		ENSG00000139547|ENST00000398138|RDH16	ENSG00000139547|ENST00000398138|RDH16	ENSG00000139547|ENST00000398138|RDH16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.2915344238281	2	478.294768	954.574983	-0.40439	-0.00019342	0.2002	9.5756E-05	-0.20419	-9.7663E-05	478.294703669349	58.747	0.58649	59.139	58.814	59.401	0.39209					25	13	2	0	0	0	0.41566	1	6160	6160		56.721	5.5284	1	485810			25996	4377	17493	17503	29667	29667					0.09587815108432096
LDVPRWKV	8	Unmodified	_LDVPRWKV_					0	0	0			REV__nc|ENSG00000198910|P32004-3|L1CAM	REV__nc|ENSG00000198910|P32004-3|L1CAM	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8016052246094	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.83	1	45.8	45.3	46.3	-0.029881								0	0	0	0.29344	1	3732	3732		31.955	1.4512	1		+		25997	23411	17494	17504	29668	29668					0.08122056922422871
LDWAQDSSCF	10	Unmodified	_LDWAQDSSCF_					0	0	0		ENSG00000125746|ENST00000245925|EML2;nc|ENSG00000125746|O95834-2|EML2;chr19:45642352-45643579|42|11.9|0.4|4.91|-|ENST00000536630|EML2,EML2;nc|ENSG00000125746|O95834-3|EML2	ENSG00000125746|ENST00000245925|EML2	ENSG00000125746|ENST00000245925|EML2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.2384033203125	2	586.239864	1170.46517	-1.3619	-0.00079838	-1.9896	-0.0011664	-3.3514	-0.0019647	586.2385898656845	45.153	0.65535	45.616	45.345	46	0.46313					46	15	4	0	0	0	0.67571	1	4168	4168		45.972	3.108	1	3207500			25998	280	17495	17505	29669	29669					-0.11323978293080472
LDWLQLPA	8	Unmodified	_LDWLQLPA_					0	0	0			REV__ENST00000462438.1_1_20:55949666-55949762:+|nuORF	REV__ENST00000462438.1_1_20:55949666-55949762:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.29437255859375	2	478.26601	954.517468	-0.40154	-0.00019204	-4.1857	-0.0020019	-4.5872	-0.0021939	478.26412671617993	58.786	0.67036	59.179	58.814	59.485	0.39209					31	15	3	0	0	0	0.4196	1	6172	6172		85.359	25.241	1	304990	+		25999	27053	17496	17506	29670	29670					0.03838972902849491
LDWLQLPA	8	Unmodified	_LDWLQLPA_					0	0	0			REV__ENST00000462438.1_1_20:55949666-55949762:+|nuORF	REV__ENST00000462438.1_1_20:55949666-55949762:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	478.26601	954.517468	-0.91297	-0.00043664	-3.1055	-0.0014853	-4.0185	-0.0019219	478.26434605972787	58.623	0.5836	59.177	58.837	59.421	0.55323	-0.00094562	0.00050785	NaN	85.359	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338560	+		26000	27053	17496	17506							0.03838972902849491
LDWNSDGTLL	10	Unmodified	_LDWNSDGTLL_					0	0	0		ENSG00000092377|ENST00000383032|TBL1Y	ENSG00000092377|ENST00000383032|TBL1Y	ENSG00000092377|ENST00000383032|TBL1Y	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3360595703125	2	567.277303	1132.54005	2.5313	0.0014359	0.18134	0.00010287	2.7126	0.0015388	567.2773630659634	98.833	1.5573	98.778	97.562	99.119	-0.054817					53	35	3	0	0	0	0.37624	1	10531	10531		25.574	0	1	195630			26001	1697	17497	17507	29671	29671					-0.02091472490178603
LDWQGIANTTL	11	Unmodified	_LDWQGIANTTL_					0	0	0			REV__nc|ENSG00000092096|Q8WUG5-3|SLC22A17	REV__nc|ENSG00000092096|Q8WUG5-3|SLC22A17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	616.3217163085938	2	616.319502	1230.62445	0.083565	5.1503E-05	2.4355	0.001501	2.5191	0.0015525	616.320908689201	54.117	1.5085	54.702	54.291	55.799	0.58474					54	35	2	0	0	0	0.241	1	5498	5498		77.318	3.1526	1	3268500	+		26002	17028	17498	17508	29672	29672					0.018364783265724327
LDWSAPPAS	9	Unmodified	_LDWSAPPAS_					0	0	0			REV__ENST00000532202.1_1_11:764444-764915:+|nuORF	REV__ENST00000532202.1_1_11:764444-764915:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28765869140625	2	472.229625	942.444697	0.72399	0.00034189	1.8447	0.00087113	2.5687	0.001213	472.2303065509824	95.047	0.40234	95.21	94.949	95.351	0.16307					14	9	2	0	0	0	0.20789	1	9733	9733		37.159	0	1	126590	+		26003	28319	17499	17509	29673	29673					-0.028827808905703023
LDWSTLVPLRL	11	Unmodified	_LDWSTLVPLRL_					0	0	0		ENSG00000149328|ENST00000535456|GLB1L2	ENSG00000149328|ENST00000535456|GLB1L2	ENSG00000149328|ENST00000535456|GLB1L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2576904296875	3	438.258967	1311.75507	-1.2137	-0.00053193	-1.9882	-0.00087133	-3.2019	-0.0014033	438.25809944136427	29.692	1.312	29.713	29.307	30.619	0.020784					97	29	5	0	0	0	0.67762	1	1898	1898		35.178	4.1101	1	6019900			26004	5020	17500	17510	29674	29674					0.11166494045414765
LDYRRELSTIV	11	Unmodified	_LDYRRELSTIV_					0	0	0			REV__nc|ENSG00000101187|Q96BD0-2|SLCO4A1	REV__nc|ENSG00000101187|Q96BD0-2|SLCO4A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.2486267089844	3	455.589265	1363.74596	-0.041249	-1.8793E-05	-0.40892	-0.0001863	-0.45017	-0.00020509	455.58901088736013	54.031	0.77591	54.053	53.745	54.521	0.022541					36	23	2	0	0	0	0.17606	1	4791	4791		14.086	4.4399	1	269290	+		26005	17248	17501	17511	29675	29675					0.07864100689084808
LEAAARRVP	9	Unmodified	_LEAAARRVP_					0	0	0		ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7961120605469	2	491.793258	981.571963	0.42504	0.00020903	4.4189	0.0021732	4.8439	0.0023822	491.7954861357076	59.345	2.1315	59.459	58.989	61.12	0.11396					113	74	3	0	0	0	0.7932	1	5084	5084		24.519	0.31644	1	139720			26006	7360	17502	17512	29676	29676					0.08043984774269575
LEAAITPE	8	Unmodified	_LEAAITPE_					0	0	0		nc|ENSG00000116761|P32929-2|CTH;nc|ENSG00000116761|P32929-3|CTH;ENSG00000116761|ENST00000370938|CTH	nc|ENSG00000116761|P32929-2|CTH	nc|ENSG00000116761|P32929-2|CTH	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.22894287109375	2	422.226551	842.438549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.544	1	61.651	61.151	62.151	0.10743								0	0	0	0.29816	1	5347	5347		38.806	3.6054	1				26007	2946	17503	17513	29677	29677					0.011027008779024072
LEAAITPE	8	Unmodified	_LEAAITPE_					0	0	0		nc|ENSG00000116761|P32929-2|CTH;nc|ENSG00000116761|P32929-3|CTH;ENSG00000116761|ENST00000370938|CTH	nc|ENSG00000116761|P32929-2|CTH	nc|ENSG00000116761|P32929-2|CTH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2288513183594	2	422.226551	842.438549	-0.76044	-0.00032108	4.0516	0.0017107	3.2911	0.0013896	422.228168536909	56.547	0.47141	56.52	56.346	56.817	-0.026108					40	22	2	0	0	0	0.86288	1	4780	4780		26.796	2.5934	1	569490			26008	2946	17503	17513	29678	29678					0.011027008779024072
LEAAITPE	8	Unmodified	_LEAAITPE_					0	0	0		nc|ENSG00000116761|P32929-2|CTH;nc|ENSG00000116761|P32929-3|CTH;ENSG00000116761|ENST00000370938|CTH	nc|ENSG00000116761|P32929-2|CTH	nc|ENSG00000116761|P32929-2|CTH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.22796630859375	2	422.226551	842.438549	-0.93887	-0.00039642	3.7277	0.001574	2.7889	0.0011775	422.2280284167546	61.398	1.0667	61.414	61.239	62.306	0.015724					73	47	2	0	0	0	0.87479	1	5362	5362		30.504	0	1	807210			26009	2946	17503	17513	29679	29679					0.011027008779024072
LEAAITPE	8	Unmodified	_LEAAITPE_					0	0	0		nc|ENSG00000116761|P32929-2|CTH;nc|ENSG00000116761|P32929-3|CTH;ENSG00000116761|ENST00000370938|CTH	nc|ENSG00000116761|P32929-2|CTH	nc|ENSG00000116761|P32929-2|CTH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2281188964844	2	422.226551	842.438549	0.74814	0.00031588	2.7591	0.001165	3.5072	0.0014808	422.22761407458984	53.96	2.2	54.369	52.793	54.993	0.40937					94	52	3	0	0	0	0.90465	1	5470	5470		40.573	7.057	1	960990			26010	2946	17503	17513	29680	29680					0.011027008779024072
LEAALNVL	8	Unmodified	_LEAALNVL_					0	0	0		nc|ENSG00000083544|Q9H7E2-2|TDRD3;chr13:60483846-60485802|46|13.52|0.65|4.38|+|ENST00000621840|TDRD3,TDRD3;nc|ENSG00000083544|Q9H7E2|TDRD3;ENSG00000083544|ENST00000377881|TDRD3	nc|ENSG00000083544|Q9H7E2-2|TDRD3	nc|ENSG00000083544|Q9H7E2-2|TDRD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.75140380859375	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.91005	1	7719	7719		42.474	1.9018	1	579450			26011	159	17504	17514	29681	29681					0.06383284011531032
LEAARRASA	9	Unmodified	_LEAARRASA_					0	0	0			REV__nc|ENSG00000104687|P00390-5|GSR	REV__nc|ENSG00000104687|P00390-5|GSR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7670593261719	2	472.76724	943.519927	0.62555	0.00029574	-0.6042	-0.00028565	0.02135	1.0094E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.73802	1	8063	8063		37.812	2.1932	1	508030	+		26012	17467	17505	17515	29682	29682					0.045908213605116543
LEAATVKH	8	Unmodified	_LEAATVKH_					0	0	0			REV__ENST00000526194.5_1_1:21560049-21616919:-|nuORF	REV__ENST00000526194.5_1_1:21560049-21616919:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801513671875	2	434.747985	867.481417	-0.53316	-0.00023179	-0.15651	-6.8041E-05	-0.68966	-0.00029983	434.74805643628594	34.01	1.151	33.954	33.25	34.401	-0.056385					33	25	2	0	0	0	0.4196	1	2162	2162		45.952	13.997	1	23179	+		26013	18254	17506	17516	29683	29683					0.0423751572599258
LEAATVKH	8	Unmodified	_LEAATVKH_					0	0	0			REV__ENST00000526194.5_1_1:21560049-21616919:-|nuORF	REV__ENST00000526194.5_1_1:21560049-21616919:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7802429199219	2	434.747985	867.481417	0.47805	0.00020783	-3.9664	-0.0017244	-3.4884	-0.0015166	434.7477495750041	34.124	0.41664	34.334	34.024	34.441	0.21002					14	9	2	0	0	0	0.4196	1	2491	2491		25.45	0	1	34365	+		26014	18254	17506	17516	29684	29684					0.0423751572599258
LEADHKVLP	9	Unmodified	_LEADHKVLP_					0	0	0		ENSG00000124143|ENST00000373345|ARHGAP40	ENSG00000124143|ENST00000373345|ARHGAP40	ENSG00000124143|ENST00000373345|ARHGAP40	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.2862548828125	2	511.287474	1020.5604	-1.5518	-0.0007934	0.65042	0.00033255	-0.90135	-0.00046085	511.28763661664226	41.815	1.2851	41.815	41.359	42.644	0					75	31	4	0	0	0	0.19953	1	2833	2833		73.975	2.0973	1	1825200			26015	3308	17507	17517	29685	29685					0.05093742960275449
LEADHKVLP	9	Unmodified	_LEADHKVLP_					0	0	0		ENSG00000124143|ENST00000373345|ARHGAP40	ENSG00000124143|ENST00000373345|ARHGAP40	ENSG00000124143|ENST00000373345|ARHGAP40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.2867431640625	2	511.287474	1020.5604	0.36299	0.00018559	-1.6305	-0.00083365	-1.2675	-0.00064806	511.28657650841876	42.002	2.0595	41.971	41.461	43.521	-0.030987					111	49	5	0	0	0	0.14115	1	3097	3097		85.359	0.44396	1	6140800			26016	3308	17507	17517	29686	29686					0.05093742960275449
LEADVNIKL	9	Unmodified	_LEADVNIKL_					0	0	0		ENST00000555317.5_1_14:35465915-35468856:+|nuORF;ENST00000555535.1_1_14:35465915-35473764:+|nuORF;ENSG00000100883|ENST00000216774|SRP54	ENST00000555317.5_1_14:35465915-35468856:+|nuORF	ENST00000555317.5_1_14:35465915-35468856:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7942810058594	2	507.795132	1013.57571	-0.85867	-0.00043603	0.28848	0.00014649	-0.57019	-0.00028954	507.7951384081689	60.196	0.84625	60.587	60.294	61.14	0.39077					41	23	2	0	0	0	0.2083	1	6381	6381		72.879	7.0761	1	776630			26017	1878	17508	17518	29687	29687					0.06946609757460465
LEAEKKGAPQ	10	Unmodified	_LEAEKKGAPQ_					0	0	0		ENSG00000139780|ENST00000267273|METTL21C	ENSG00000139780|ENST00000267273|METTL21C	ENSG00000139780|ENST00000267273|METTL21C	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7222290039062	2	535.795663	1069.57677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.865	1	66.418	65.918	66.918	0.5526								0	0	0	0.45132	1	7187	7187		41.427	4.2675	1				26018	4397	17509	17519	29688	29688					0.04476824126390966
LEAGLPLV	8	Unmodified	_LEAGLPLV_					0	0	0			REV__ENST00000485984.1_1_1:3389348-3394597:+|nuORF	REV__ENST00000485984.1_1_1:3389348-3394597:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2484130859375	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.91005	1	8939	8939		42.474	7.2737	1	50007000	+		26019	27537	17510	17520	29689	29689					0.07228185499843676
LEAGLPLV	8	Unmodified	_LEAGLPLV_					0	0	0			REV__ENST00000485984.1_1_1:3389348-3394597:+|nuORF	REV__ENST00000485984.1_1_1:3389348-3394597:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.24853515625	2	406.249829	810.485105	-1.9277	-0.00078311	-1.0996	-0.00044672	-3.0273	-0.0012298	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.89457	1	8662	8662		37.028	0	1	31099000	+		26020	27537	17510	17520	29690	29690					0.07228185499843676
LEAGPARAR	9	Unmodified	_LEAGPARAR_					0	0	0		nc|ENSG00000164488|Q5SW24-2|DACT2;ENSG00000164488|ENST00000366795|DACT2	nc|ENSG00000164488|Q5SW24-2|DACT2	nc|ENSG00000164488|Q5SW24-2|DACT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	471.24310302734375	2	470.769783	939.525013	0.61923	0.00029151	-2.7222	-0.0012815	-2.103	-0.00099001	470.7683272375818	83.421	1.2867	83.568	83.229	84.516	0.14694					41	29	2	0	0	0	0.20789	1	8154	8154		9.1829	0	1	71671			26021	5967	17511	17521	29691	29691					0.052831252231385406
LEAISNHK	8	Unmodified	_LEAISNHK_					0	0	0		nc|ENSG00000152583|Q14515-2|SPARCL1;ENSG00000152583|ENST00000282470|SPARCL1	nc|ENSG00000152583|Q14515-2|SPARCL1	nc|ENSG00000152583|Q14515-2|SPARCL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.793212890625	2	456.250892	910.48723	0.17202	7.8484E-05	2.2199	0.0010128	2.3919	0.0010913	456.2517342084429	35.297	1.1159	35.403	35.2	36.316	0.10603					57	34	2	0	0	0	0.4196	1	1957	1957		31.955	6.5047	1	112130			26022	5187	17512	17522	29692	29692					0.028406142376638854
LEAKKSEGY	9	Unmodified	_LEAKKSEGY_					0	0	0			REV__L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|44|2|sense	REV__L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|44|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.7691040039062	2	512.769114	1023.52368	0.25179	0.00012911	0.15732	8.067E-05	0.40911	0.00020978	512.7687542382856	38.296	0.6024	38.39	38.087	38.69	0.094322					51	20	4	0	0	0	0.51307	1	2252	2252		51.335	1.8939	1	380480	+		26023	29508	17513	17523	29693	29693					0.01285446343717922
LEAKLDEYSK	10	Unmodified	_LEAKLDEYSK_					0	0	0			REV__ENSG00000127831|ENST00000248444|VIL1	REV__ENSG00000127831|ENST00000248444|VIL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3148803710938	2	598.313886	1194.61322	0.50818	0.00030405	4.2226	0.0025264	4.7308	0.0028305	598.3162484804533	53.293	0.57906	53.707	53.457	54.036	0.4139					31	13	3	0	0	0	0.86225	1	5390	5390		32.751	1.1163	1	490210	+		26024	18747	17514	17524	29694	29694					0.02369656232417583
LEAKVEGNAF	10	Unmodified	_LEAKVEGNAF_					0	0	0			REV__ENSG00000065325|ENST00000262441|GLP2R	REV__ENSG00000065325|ENST00000262441|GLP2R	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	539.280517578125	2	539.282389	1076.55022	-0.90124	-0.00048602	1.0435	0.00056276	0.1423	7.6738E-05	539.2827714526277	76.319	0.78116	76.319	75.958	76.739	0					54	28	3	0	0	0	0.57924	1	6960	6960		51.193	5.2407	1	191520	+		26025	16496	17515	17525	29695	29695					0.01501135235048423
LEALILKELSV	11	Unmodified	_LEALILKELSV_					0	0	0		ENSG00000148606|ENST00000372371|POLR3A	ENSG00000148606|ENST00000372371|POLR3A	ENSG00000148606|ENST00000372371|POLR3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	614.3868408203125	2	614.381571	1226.74859	0.3547	0.00021792	3.712	0.0022806	4.0667	0.0024985	614.3829643566424	100.23	0.83938	100.28	99.895	100.73	0.046356					31	18	2	0	0	0	0.7144	1	10784	10784		29.17	4.6509	1	200250			26026	4972	17516	17526	29696	29696					0.14428556094048872
LEALILKELSV	11	Unmodified	_LEALILKELSV_					0	0	0		ENSG00000148606|ENST00000372371|POLR3A	ENSG00000148606|ENST00000372371|POLR3A	ENSG00000148606|ENST00000372371|POLR3A	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	614.381571	1226.74859	-0.15246	-9.3669E-05	4.1974	0.0025788	4.0449	0.0024851	614.3834583696693	100.58	0.70934	100.58	100.28	100.99	0	0.1637	0.00061001	NaN	29.17	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102460			26027	4972	17516	17526							0.14428556094048872
LEALILKELSV	11	Unmodified	_LEALILKELSV_					0	0	0		ENSG00000148606|ENST00000372371|POLR3A	ENSG00000148606|ENST00000372371|POLR3A	ENSG00000148606|ENST00000372371|POLR3A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	614.381571	1226.74859	-0.37058	-0.00022768	4.7114	0.0028946	4.3408	0.0026669	614.3840432103993	100.51	0.88322	100.54	100.13	101.01	0.032761	0.12018	0.0012416	NaN	29.17	44	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224400			26028	4972	17516	17526							0.14428556094048872
LEALKPEVL	9	Unmodified	_LEALKPEVL_					0	0	0			REV__ENSG00000152818|ENST00000367545|UTRN	REV__ENSG00000152818|ENST00000367545|UTRN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.7516784667969	2	506.307875	1010.6012	0.76115	0.00038538	1.4145	0.00071618	2.1757	0.0011016	506.3085592034558	52.724	0.78512	53.338	52.746	53.531	0.61436					29	18	2	0	0	0	0.20789	1	5284	5284		62.107	21.329	1	151590	+		26029	20318	17517	17527	29697	29697					0.0963208427989457
LEALLRAVF	9	Unmodified	_LEALLRAVF_					0	0	0		ENSG00000204128|ENST00000373640|C2orf72	ENSG00000204128|ENST00000373640|C2orf72	ENSG00000204128|ENST00000373640|C2orf72	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.8133544921875	2	516.316035	1030.61752	-0.04705	-2.4293E-05	-3.1675	-0.0016354	-3.2145	-0.0016597	516.3145034202523	104.77	1.0483	104.76	104.19	105.24	-0.014809					46	24	2	0	0	0	0.20789	1	11233	11233		29.15	0	1	626450			26030	8416	17518	17528	29698	29698					0.10343210236646883
LEALLRAVF	9	Unmodified	_LEALLRAVF_					0	0	0		ENSG00000204128|ENST00000373640|C2orf72	ENSG00000204128|ENST00000373640|C2orf72	ENSG00000204128|ENST00000373640|C2orf72	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	516.316035	1030.61752	-0.63197	-0.0003263	-2.071	-0.0010693	-2.703	-0.0013956	516.3151782336543	104.88	1.134	104.88	104.24	105.37	0	0.26743	0.0016266	NaN	29.15	50	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	434460			26031	8416	17518	17528							0.10343210236646883
LEALLRAVF	9	Unmodified	_LEALLRAVF_					0	0	0		ENSG00000204128|ENST00000373640|C2orf72	ENSG00000204128|ENST00000373640|C2orf72	ENSG00000204128|ENST00000373640|C2orf72	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	516.316035	1030.61752	3.102	0.0016016	-6.2768	-0.0032408	-3.1748	-0.0016392	516.3129405393149	104.76	1.0862	104.72	104.1	105.19	-0.04039	0.10796	-0.0027164	NaN	29.15	46	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	634120			26032	8416	17518	17528							0.10343210236646883
LEALLRAVF	9	Unmodified	_LEALLRAVF_					0	0	0		ENSG00000204128|ENST00000373640|C2orf72	ENSG00000204128|ENST00000373640|C2orf72	ENSG00000204128|ENST00000373640|C2orf72	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	516.316035	1030.61752	0.87917	0.00045393	-4.4485	-0.0022968	-3.5693	-0.0018429	516.3139893630564	104.54	1.1683	104.58	104.04	105.21	0.039864	-0.031834	-0.00082839	NaN	29.15	79	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	662850			26033	8416	17518	17528							0.10343210236646883
LEALLRAVF	9	Unmodified	_LEALLRAVF_					0	0	0		ENSG00000204128|ENST00000373640|C2orf72	ENSG00000204128|ENST00000373640|C2orf72	ENSG00000204128|ENST00000373640|C2orf72	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	516.316035	1030.61752	2.1652	0.0011179	-4.9833	-0.0025729	-2.818	-0.001455	516.3152519042768	104.15	0.95578	104.34	104.04	104.99	0.18888	-0.27625	-0.0013807	NaN	29.15	37	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76180			26034	8416	17518	17528							0.10343210236646883
LEALRQSY	8	Unmodified	_LEALRQSY_					0	0	0			REV__ENSG00000197912|ENST00000645818|SPG7	REV__ENSG00000197912|ENST00000645818|SPG7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.265380859375	2	490.263999	978.513445	-1.7052	-0.000836	1.6754	0.00082141	-0.029775	-1.4597E-05	490.2646683653372	39.615	1.3375	39.983	39.471	40.808	0.36797					70	32	3	0	0	0	0.94135	1	3353	3353		54.776	8.8244	1	613620	+		26035	23279	17519	17529	29699	29699					0.023328834091330464
LEALVFGSLLI	11	Unmodified	_LEALVFGSLLI_					0	0	0			REV__chr14:68154663-68291884|14|11.57|0.05|7.93|+|2|TE_info:L1MEc,L1MEc_dup15126,L1,LINE,donor,-,68154024,68154663|None,RAD51B|4	REV__chr14:68154663-68291884|14|11.57|0.05|7.93|+|2|TE_info:L1MEc,L1MEc_dup15126,L1,LINE,donor,-,68154024,68154663|None,RAD51B|4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.328125	2	587.857732	1173.70091	-1.4101	-0.00082895	-2.0586	-0.0012102	-3.4688	-0.0020391	587.8564795256584	71.744	0.83012	72.129	71.752	72.582	0.38449					34	19	2	0	0	0	0.17385	1	8049	8049		19.104	0	1	308470	+		26036	15603	17520	17530	29700	29700					0.12100901893859373
LEALVGLGE	9	Unmodified	_LEALVGLGE_					0	0	0		ENST00000549966.5_2_12:50135351-50135387:+|nuORF	ENST00000549966.5_2_12:50135351-50135387:+|nuORF	ENST00000549966.5_2_12:50135351-50135387:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7542724609375	2	450.755475	899.496398	0.58167	0.00026219	-3.5127	-0.0015834	-2.9311	-0.0013212	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.74721	1	7657	7657		37.159	5.2042	1	285810			26037	13649	17521	17531	29701	29701					0.04262962803340997
LEAPLLRRAL	10	Unmodified	_LEAPLLRRAL_					0	0	0			REV__ENST00000541490.5_1_12:26148003-26208223:+|nuORF	REV__ENST00000541490.5_1_12:26148003-26208223:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3699340820312	2	576.36659	1150.71863	0.5205	0.0003	4.1404	0.0023864	4.6609	0.0026864	576.3688108191589	39.411	1.3074	39.422	39.01	40.317	0.010704					81	33	3	0	0	0	0.86718	1	2445	2445		27.882	2.3082	1	325270	+		26038	25965	17522	17532	29702	29702					0.14929661939368088
LEAPSPKA	8	Unmodified	_LEAPSPKA_					0	0	0		ENSG00000165650|ENST00000334464|PDZD8	ENSG00000165650|ENST00000334464|PDZD8	ENSG00000165650|ENST00000334464|PDZD8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.728271484375	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.884	1	7517	7517		33.516	1.5607	1	159770			26039	6105	17523	17533	29703	29703					0.030704244603725783
LEAQEPVSMQS	11	Unmodified	_LEAQEPVSMQS_					0	0	0			REV__nc|ENSG00000078674|Q15154-4|PCM1	REV__nc|ENSG00000078674|Q15154-4|PCM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2569580078125	3	406.860544	1217.5598	-1.857	-0.00075556	-3.7306	-0.0015178	-5.5877	-0.0022734	406.85949713432734	64.627	0.31723	64.753	64.669	64.986	0.12545					10	9	2	0	0	0	0.17281	1	5702	5702		18.966	8.8624	1	32958	+		26040	16768	17524	17534	29704	29704					-0.04027464541718473
LEAQLSLVREG	11	Unmodified	_LEAQLSLVREG_					0	0	0		nc|ENSG00000116786|Q8IWE5-2|PLEKHM2;ENSG00000116786|ENST00000375799|PLEKHM2	nc|ENSG00000116786|Q8IWE5-2|PLEKHM2	nc|ENSG00000116786|Q8IWE5-2|PLEKHM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.56500244140625	3	405.562827	1213.66665	0.049875	2.0228E-05	4.1009	0.0016632	4.1508	0.0016834	405.5644031089545	61.094	0.39898	61.061	60.713	61.112	-0.032509					28	15	2	0	0	0	0.69995	1	5773	5773		21.78	0	1	359570			26041	2948	17525	17535	29705	29705					0.06836453734968018
LEARQFGVL	9	Unmodified	_LEARQFGVL_					0	0	0			REV__ENST00000382252.5_1_7:6694764-6695430:+|nuORF	REV__ENST00000382252.5_1_7:6694764-6695430:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7932739257812	2	516.795466	1031.57638	-0.83709	-0.0004326	-3.0347	-0.0015683	-3.8718	-0.0020009	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.78983	1	8643	8643		27.882	1.0861	1	490270	+		26042	25975	17526	17536	29706	29706					0.06185449197187154
LEASKLLLTY	10	Unmodified	_LEASKLLLTY_					0	0	0		nc|ENSG00000151092|Q96IV0-3|NGLY1;nc|ENSG00000151092|Q96IV0-2|NGLY1;ENSG00000151092|ENST00000280700|NGLY1;ENST00000463611.1_1_3:25824608-25824881:-|nuORF;ENST00000478991.1_1_3:25819998-25824881:-|nuORF;ENST00000474611.1_1_3:25819310-25824959:-|nuORF;ENST00000493324.5_1_3:25778798-25824881:-|nuORF	nc|ENSG00000151092|Q96IV0-3|NGLY1	nc|ENSG00000151092|Q96IV0-3|NGLY1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8427734375	2	575.839539	1149.66453	1.6833	0.00096931	4.3447	0.0025019	6.028	0.0034712	575.8419126202111	90.702	2.7581	90.632	88.716	91.474	-0.069977					216	65	4	0	0	0	0.86763	1	9570	9570		26.693	1.1189	1	1939000			26043	5093	17527	17537	29707	29707					0.09568024997156499
LEASRNKIL	9	Unmodified	_LEASRNKIL_					0	0	0			REV__ENSG00000105376|ENST00000221980|ICAM5	REV__ENSG00000105376|ENST00000221980|ICAM5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3035278320312	2	522.314023	1042.61349	2.1295	0.0011123	1.7204	0.00089861	3.8499	0.0020109	522.3146821883638	100.88	0.64096	101.18	100.77	101.41	0.2999					32	15	3	0	0	0	0.20789	1	12222	12222		37.159	15.199	1	523380	+		26044	17531	17528	17538	29708	29708					0.09389120742957857
LEAVLKTLL	9	Unmodified	_LEAVLKTLL_					0	0	0			REV__ENSG00000160796|ENST00000450053|NBEAL2	REV__ENSG00000160796|ENST00000450053|NBEAL2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.32745361328125	2	500.326068	998.637583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.986	1	19.917	19.417	20.417	-0.069735								0	0	0	0.32469	1	486	486		21.96	5.4867	1		+		26045	20741	17529	17539	29709	29709					0.13820961176634228
LECIARSFRKQ	11	Unmodified	_LECIARSFRKQ_					0	0	0		ENSG00000146918|ENST00000356309|NCAPG2;nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000432615.5_1_7:158424360-158447416:-|nuORF;ENST00000467785.5_1_7:158424360-158447992:-|nuORF	ENSG00000146918|ENST00000356309|NCAPG2	ENSG00000146918|ENST00000356309|NCAPG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.7611389160156	3	450.915206	1349.72379	-0.27469	-0.00012386	-2.3252	-0.0010485	-2.5999	-0.0011723	450.9139798900895	36.644	0.65503	36.925	36.767	37.422	0.28173					22	15	2	0	0	0	0.17396	1	2920	2920		32.034	0	1	91750			26046	4870	17530	17540	29710	29710					0.06291597739664212
LECIKIIALLH	11	Unmodified	_LECIKIIALLH_					0	0	0		ENST00000540613.5_1_12:15815414-15815453:-|nuORF	ENST00000540613.5_1_12:15815414-15815453:-|nuORF	ENST00000540613.5_1_12:15815414-15815453:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.592529296875	3	422.593181	1264.75771	-0.769	-0.00032497	-0.65209	-0.00027557	-1.4211	-0.00060054	422.5927811733958	56.589	1.3448	56.562	56.404	57.748	-0.026108					132	66	3	0	0	0	0.74771	1	4809	4809		22.562	4.2995	1	616410			26047	13500	17531	17541	29711	29711					0.13592626178706269
LECKLPFP	8	Unmodified	_LECKLPFP_					0	0	0			REV__ENST00000366711.3_1_1:228364011-228364131:+|nuORF	REV__ENST00000366711.3_1_1:228364011-228364131:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.75421142578125	2	473.756964	945.499375	-0.45101	-0.00021367	-3.4693	-0.0016436	-3.9203	-0.0018573	473.75530022326774	15.709	0.24084	15.111	15.007	15.248	-0.59873					13	8	2	0	0	0	0.92973	1	36	36		50.025	2.1089	1	82097	+		26048	25533	17532	17542	29712	29712					0.024445146564971765
LECLNAILI	9	Unmodified	_LECLNAILI_					0	0	0		ENST00000560523.5_1_15:70964229-70991966:-|nuORF;nc|ENSG00000137831|Q9BZF9-2|UACA;ENSG00000137831|ENST00000322954|UACA	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2913513183594	2	501.288628	1000.5627	1.9814	0.00099324	2.0395	0.0010224	4.0209	0.0020156	501.2894698327482	99.155	1.1501	99.518	99.094	100.24	0.36292					59	28	3	0	0	0	0.51307	1	11998	11998		51.335	10.557	1	1034500			26049	4240	17533	17543	29713	29713					0.06244455373735036
LECLNAILI	9	Unmodified	_LECLNAILI_					0	0	0		ENST00000560523.5_1_15:70964229-70991966:-|nuORF;nc|ENSG00000137831|Q9BZF9-2|UACA;ENSG00000137831|ENST00000322954|UACA	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	501.288628	1000.5627	-0.75978	-0.00038087	4.9542	0.0024835	4.1944	0.0021026	501.290862689854	99.716	1.5054	99.716	99.182	100.69	0	0.22159	0.0011921	NaN	51.335	84	35	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	611590			26050	4240	17533	17543							0.06244455373735036
LECLNAILI	9	Unmodified	_LECLNAILI_					0	0	0		ENST00000560523.5_1_15:70964229-70991966:-|nuORF;nc|ENSG00000137831|Q9BZF9-2|UACA;ENSG00000137831|ENST00000322954|UACA	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	501.288628	1000.5627	-0.4806	-0.00024092	4.634	0.002323	4.1534	0.0020821	501.29075662244736	99.197	1.8998	99.42	98.833	100.73	0.22262	-0.07445	0.00087106	NaN	51.335	82	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	768070			26051	4240	17533	17543							0.06244455373735036
LEDEVPGV	8	Unmodified	_LEDEVPGV_					0	0	0		nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170004|Q12873-2|CHD3;ENSG00000170004|ENST00000330494|CHD3;ENST00000470531.5_3_17:7807732-7814900:+|nuORF	nc|ENSG00000170004|Q12873-3|CHD3	nc|ENSG00000170004|Q12873-3|CHD3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	429.2356872558594	2	429.216183	856.417813	-1.5408	-0.00066132	4.2288	0.0018151	2.688	0.0011538	429.2185241613474	63.403	0.11271	63.403	63.318	63.431	0					6	4	2	0	0	0	0.4196	1	5555	5555		20.482	9.6163	1	28592			26052	15087	17534	17544	29714	29714					-0.01613889501743415
LEDFLDGILGA	11	Unmodified	_LEDFLDGILGA_					0	0	0		ENSG00000115423|ENST00000389394|DNAH6;nc|ENSG00000115423|Q9C0G6-4|DNAH6;nc|ENSG00000115423|Q9C0G6-3|DNAH6;ENST00000476689.5_1_2:84775422-84811380:+|nuORF	ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.8038330078125	2	581.803154	1161.59175	0.55662	0.00032384	0.72683	0.00042287	1.2834	0.00074671	581.8034623871067	64.587	0.91196	64.711	64.307	65.219	0.12396					103	32	4	0	0	0	0.31674	1	5703	5703		71.877	2.2498	1	1348900			26053	2844	17535	17545	29715	29715					0.017422712037159727
LEDFLDGILGA	11	Unmodified	_LEDFLDGILGA_					0	0	0		ENSG00000115423|ENST00000389394|DNAH6;nc|ENSG00000115423|Q9C0G6-4|DNAH6;nc|ENSG00000115423|Q9C0G6-3|DNAH6;ENST00000476689.5_1_2:84775422-84811380:+|nuORF	ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.8043823242188	2	581.803154	1161.59175	-0.38859	-0.00022608	1.6028	0.00093252	1.2142	0.00070643	581.8039278699252	62.852	1.4375	63.407	62.993	64.43	0.55449					85	33	4	0	0	0	0.31674	2	6758	6758;6784		71.877	5.4482	1	1607100			26054	2844	17535	17545	29716;29717	29716					0.017422712037159727
LEDGLLQSALR	11	Unmodified	_LEDGLLQSALR_					0	0	0			REV__nc|ENSG00000175182|Q6UXB0-2|FAM131A	REV__nc|ENSG00000175182|Q6UXB0-2|FAM131A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5652160644531	3	405.562827	1213.66665	1.3822	0.00056055	2.8185	0.0011431	4.2006	0.0017036	405.89828618709805	61.013	0.68465	61.044	60.43	61.114	0.0312					51	24	3	0	0	0	0.7144	1	5679	5679		20.315	0	1	508750	+		26055	22046	17536	17546	29718	29718					0.0683645373494528
LEDHCLELT	9	Carbamidomethyl (C)	_LEDHC(Carbamidomethyl (C))LELT_	LEDHC(1)LELT		LEDHC(74)LELT		0	1	0			REV__ENSG00000221869|ENST00000408965|CEBPD	REV__ENSG00000221869|ENST00000408965|CEBPD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	565.26220703125	2	565.263339	1128.51212	-0.93434	-0.00052815	0.02395	1.3538E-05	-0.91039	-0.00051461	565.2632126335383	42.207	0.73315	42.169	41.936	42.669	-0.038223					39	17	3	0	0	0	0.19953	1	3243	3243		73.975	7.5455	1	616890	+		26056	23710	17537	17547	29719	29719	287				-0.046991187419507696
LEDHTLAH	8	Unmodified	_LEDHTLAH_					0	0	0		nc|ENSG00000152492|Q8IVM0|CCDC50;ENSG00000152492|ENST00000392455|CCDC50	nc|ENSG00000152492|Q8IVM0|CCDC50	nc|ENSG00000152492|Q8IVM0|CCDC50	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2335510253906	2	468.232699	934.450845	0.26351	0.00012339	-2.3741	-0.0011116	-2.1106	-0.00098825	468.2317048814858	68.305	0.29213	68.69	68.487	68.779	0.38483					12	6	2	0	0	0	0.4196	1	7487	7487		26.796	17.974	1	74210			26057	5177	17538	17548	29720	29720					-0.019002626590577165
LEDIALPKL	9	Unmodified	_LEDIALPKL_					0	0	0		ENST00000206423.7_2_3:112318632-112318818:-|nuORF	ENST00000206423.7_2_3:112318632-112318818:-|nuORF	ENST00000206423.7_2_3:112318632-112318818:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.30865478515625	2	506.307875	1010.6012	-0.31621	-0.0001601	2.6085	0.0013207	2.2923	0.0011606	506.30917765432565	52.06	1.3701	51.984	51.238	52.608	-0.075367					75	42	2	0	0	0	0.7932	1	4119	4119		26.693	5.746	1	144070			26058	9107	17539	17549	29721	29721					0.0963208427989457
LEDIRALLA	9	Unmodified	_LEDIRALLA_					0	0	0		ENSG00000178031|ENST00000380548|ADAMTSL1;ENST00000380559.7_1_9:18706652-18908543:+|nuORF;nc|ENSG00000178031|Q8N6G6-5|ADAMTSL1;nc|ENSG00000178031|Q8N6G6-6|ADAMTSL1	ENSG00000178031|ENST00000380548|ADAMTSL1	ENSG00000178031|ENST00000380548|ADAMTSL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.31103515625	2	507.303124	1012.5917	-0.63467	-0.00032197	-0.060359	-3.062E-05	-0.69503	-0.00035259	507.30305834033726	49.2	1.4561	49.2	48.793	50.249	0.00016785					41	32	2	0	0	0	0.20789	1	4176	4176		16.473	0	1	107570			26059	7177	17540	17550	29722	29722					0.08590315994365483
LEDKEIIDKL	10	Unmodified	_LEDKEIIDKL_					0	0	0			REV__ENSG00000161594|ENST00000293303|KLHL10	REV__ENSG00000161594|ENST00000293303|KLHL10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.91204833984375	3	405.899216	1214.67582	1.2934	0.00052498	0.65353	0.00026527	1.9469	0.00079025	406.23329884936715	37.59	0.196	37.903	37.746	37.942	0.31312					6	4	2	0	0	0	0.37624	1	3015	3015		83.647	36.419	1	92573	+		26060	20769	17541	17551	29723	29723					0.0770680230061771
LEDLPVGTVI	10	Unmodified	_LEDLPVGTVI_					0	0	0		ENSG00000165323|ENST00000525166|FAT3;nc|ENSG00000165323|Q8TDW7|FAT3;nc|ENSG00000165323|Q8TDW7-2|FAT3	ENSG00000165323|ENST00000525166|FAT3	ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.30322265625	2	528.30279	1054.59103	-0.48442	-0.00025592	0.35616	0.00018816	-0.12826	-6.776E-05	528.3027239654247	58.167	1.0966	58.56	57.929	59.025	0.39342					42	26	2	0	0	0	0.30722	1	6065	6065		71.877	1.0613	1	1052300			26061	6072	17542	17552	29724	29724					0.06591476554672226
LEDLSPMVPV	10	Unmodified	_LEDLSPMVPV_					0	0	0			REV__ENSG00000130147|ENST00000392011|SH3BP4	REV__ENSG00000130147|ENST00000392011|SH3BP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.2879638671875	2	550.288825	1098.5631	0.39664	0.00021827	-2.9385	-0.001617	-2.5419	-0.0013988	550.2870812764359	90.364	0.93704	90.815	90.528	91.465	0.45058					59	22	4	0	0	0	0.3985	1	10698	10698		64.207	6.396	1	2468700	+		26062	18848	17543	17553	29725	29725					0.017758303029268063
LEDPNQATY	9	Unmodified	_LEDPNQATY_					0	0	0			REV__ENST00000560064.1_1_15:77328060-77329514:+|nuORF	REV__ENST00000560064.1_1_15:77328060-77329514:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3614501953125	2	525.740554	1049.46655	1.1409	0.0005998	-0.79655	-0.00041878	0.34431	0.00018102	525.7399566963361	34.306	0.28641	34.516	34.359	34.646	0.21002					11	6	2	0	0	0	0.20789	1	2533	2533		44.117	14.967	1	92711	+		26063	19607	17544	17554	29726	29726					-0.05620020932656189
LEDQIALVRQK	11	Unmodified	_LEDQIALVRQK_					0	0	0		nc|ENSG00000162520|Q9H7C4-2|SYNC;ENSG00000162520|ENST00000409190|SYNC	nc|ENSG00000162520|Q9H7C4-2|SYNC	nc|ENSG00000162520|Q9H7C4-2|SYNC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.9268798828125	3	438.257626	1311.75105	-1.5943	-0.00069873	1.7641	0.00077311	0.16972	7.4382E-05	438.2583289789849	29.969	0.70984	30.036	29.73	30.44	0.066727					92	32	4	0	0	0	0.74344	1	1282	1282		23.514	0.95276	1	499410			26064	5696	17545	17555	29727	29727					0.10764404551696316
LEDSIGLSK	9	Unmodified	_LEDSIGLSK_					0	0	0		ENSG00000138095|ENST00000260665|LRPPRC;ENST00000463456.5_1_2:44115741-44128754:-|nuORF	ENSG00000138095|ENST00000260665|LRPPRC	ENSG00000138095|ENST00000260665|LRPPRC	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.27874755859375	2	481.263665	960.512776	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.448	1	64.834	64.334	65.334	0.3868								0	0	0	0.29796	1	6964	6964		31.53	0	1				26065	4269	17546	17556	29728	29728					0.03094043969440463
LEDSLLKI	8	Unmodified	_LEDSLLKI_					0	0	0		ENSG00000196620|ENST00000338206|UGT2B15	ENSG00000196620|ENST00000338206|UGT2B15	ENSG00000196620|ENST00000338206|UGT2B15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7772216796875	2	465.778951	929.543348	-0.1189	-5.538E-05	-2.6882	-0.0012521	-2.8071	-0.0013075	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.93293	1	7822	7822		51.335	3.4199	1	345200			26066	8082	17547	17557	29729	29729					0.07575822354476713
LEDVLARCA	9	Unmodified	_LEDVLARCA_					0	0	0			REV__ENST00000553164.1_1_12:56708586-56709779:-|nuORF	REV__ENST00000553164.1_1_12:56708586-56709779:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.25982666015625	2	495.257859	988.501166	1.1508	0.00056992	3.2595	0.0016143	4.4103	0.0021842	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.51307	1	2654	2654		51.335	0	1	3842700	+		26067	28641	17548	17558	29730	29730					0.006455236744386639
LEDVLGPP	8	Unmodified	_LEDVLGPP_					0	0	0		ENSG00000164332|ENST00000296786|UBLCP1	ENSG00000164332|ENST00000296786|UBLCP1	ENSG00000164332|ENST00000296786|UBLCP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2275085449219	2	420.229094	838.443634	-0.26172	-0.00010998	-2.7119	-0.0011396	-2.9737	-0.0012496	420.2278427718772	76.28	2.2676	76.231	74.595	76.863	-0.048271					136	69	3	0	0	0	0.82464	1	7481	7481		21.702	1.2205	1	253020			26068	5958	17549	17559	29731	29731					0.017950047405292935
LEDVVVLN	8	Unmodified	_LEDVVVLN_					0	0	0		ENSG00000205744|ENST00000381480|DENND1C;nc|ENSG00000205744|Q8IV53-2|DENND1C;ENST00000590444.5_1_19:6471408-6475578:-|nuORF	ENSG00000205744|ENST00000381480|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.75439453125	2	450.755475	899.496398	-1.4711	-0.00066312	-1.5388	-0.00069364	-3.01	-0.0013568	450.7547246648738	79.827	2.1578	79.926	78.179	80.337	0.098701					99	70	2	0	0	0	0.884	1	7494	7494		33.516	0	1	155440			26069	8539	17550	17560	29732	29732					0.042629628033296285
LEEAALRR	8	Unmodified	_LEEAALRR_					0	0	0		ENSG00000108588|ENST00000225726|CCDC47	REV__ENSG00000158966|ENST00000651257|CACHD1	REV__ENSG00000158966|ENST00000651257|CACHD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2774353027344	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.87064	1	7839	7839		29.15	4.6304	1	4644500			26070	20631	17551	17561	29733	29733					0.06031992020314192
LEEAAWLQ	8	Unmodified	_LEEAAWLQ_					0	0	0			REV__ENST00000471105.5_1_1:201965436-201974841:+|nuORF	REV__ENST00000471105.5_1_1:201965436-201974841:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.24432373046875	2	480.245275	958.475997	-1.8479	-0.00088747	-2.0993	-0.0010082	-3.9473	-0.0018956	480.24400212311673	32.713	0.57332	32.713	32.476	33.049	0					49	27	3	0	0	0	0.92973	1	1643	1643		50.025	2.1089	1	131570	+		26071	22124	17552	17562	29734	29734					-0.004902078564896328
LEEAGSAH	8	Unmodified	_LEEAGSAH_					0	0	0		ENST00000469412.5_1_21:32585686-32624433:-|nuORF;nc|ENSG00000156299|Q13009-2|TIAM1;ENSG00000156299|ENST00000541036|TIAM1	ENST00000469412.5_1_21:32585686-32624433:-|nuORF	ENST00000469412.5_1_21:32585686-32624433:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.24859619140625	2	407.1905	812.366446	-1.1666	-0.00047503	-2.2356	-0.0009103	-3.4022	-0.0013853	407.18967003917385	88.111	1.1257	88.575	88.102	89.227	0.46311					43	27	3	0	0	0	0.4196	1	10396	10396		12.959	0	1	135290			26072	5373	17553	17563	29735	29735					-0.04724213475799388
LEEAGSAH	8	Unmodified	_LEEAGSAH_					0	0	0		ENST00000469412.5_1_21:32585686-32624433:-|nuORF;nc|ENSG00000156299|Q13009-2|TIAM1;ENSG00000156299|ENST00000541036|TIAM1	ENST00000469412.5_1_21:32585686-32624433:-|nuORF	ENST00000469412.5_1_21:32585686-32624433:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.89288330078125	2	407.1905	812.366446	-0.11766	-4.7912E-05	-3.2727	-0.0013326	-3.3904	-0.0013805	407.18930542175184	80.27	1.1309	80.797	80.275	81.406	0.52676					40	26	3	0	0	0	0.4196	1	9332	9332		11.511	0	1	159590			26073	5373	17553	17563	29736	29736					-0.04724213475799388
LEEAPEPSC	9	Unmodified	_LEEAPEPSC_					0	0	0		nc|ENSG00000290618|P0DPF6|CDRT15P3	nc|ENSG00000290618|P0DPF6|CDRT15P3	nc|ENSG00000290618|P0DPF6|CDRT15P3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.708251953125	2	487.710408	973.406262	-0.087158	-4.2508E-05	-3.0522	-0.0014886	-3.1393	-0.0015311	487.70876098270276	65.027	0.51559	65.032	64.747	65.263	0.0046997					21	14	2	0	0	0	0.78983	1	6111	6111		27.882	1.1893	1	100210			26074	15339	17554	17564	29737	29737					-0.0815045458740542
LEEARRLRR	9	Unmodified	_LEEARRLRR_					0	0	0		ENST00000375940.8_1_10:27444302-27444419:+|nuORF	ENST00000375940.8_1_10:27444302-27444419:+|nuORF	ENST00000375940.8_1_10:27444302-27444419:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	600.2994384765625	2	599.859995	1197.70544	0.36524	0.00021909	2.147	0.0012879	2.5123	0.001507	599.8630756469109	80.211	0.54874	80.627	80.464	81.013	0.41621					21	12	3	0	0	0	0.20789	1	9203	9203		21.96	1.013	1	97942			26075	10809	17555	17565	29738	29738					0.11449223879981218
LEEASPLVT	9	Unmodified	_LEEASPLVT_					0	0	0		nc|ENSG00000130589|Q9BYK8|HELZ2;ENSG00000130589|ENST00000467148|HELZ2;nc|ENSG00000130589|Q9BYK8-2|HELZ2	nc|ENSG00000130589|Q9BYK8|HELZ2	nc|ENSG00000130589|Q9BYK8|HELZ2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2774658203125	2	479.758215	957.501877	0.69821	0.00033497	-2.3917	-0.0011474	-1.6935	-0.00081248	479.7568630250107	83.625	2.0912	83.555	82.453	84.544	-0.069313					76	48	2	0	0	0	0.20789	1	8450	8450		10.866	0.6003	1	93082			26076	3658	17556	17566	29739	29739					0.021426415951623312
LEEEALQKV	9	Unmodified	_LEEEALQKV_					0	0	0		nc|ENSG00000137962|Q52LW3-2|ARHGAP29;ENSG00000137962|ENST00000260526|ARHGAP29	nc|ENSG00000137962|Q52LW3-2|ARHGAP29	nc|ENSG00000137962|Q52LW3-2|ARHGAP29	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.790283203125	2	529.790047	1057.56554	-0.70401	-0.00037298	-0.13833	-7.3286E-05	-0.84234	-0.00044626	529.7898547932233	42.858	0.782	43.291	43.006	43.788	0.4334					53	18	4	0	0	0	0.038282	1	3847	3847		113.41	3.9728	1	4489500			26077	4249	17557	17567	29740	29740					0.03906002032226752
LEEEDEEPG	9	Unmodified	_LEEEDEEPG_					0	0	0			REV__ENSG00000204131|ENST00000633930|NHSL2	REV__ENSG00000204131|ENST00000633930|NHSL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8136596679688	2	523.711659	1045.40876	0.9846	0.00051564	0.49837	0.000261	1.483	0.00077665	523.7116170205757	24.512	0.58571	24.184	23.936	24.521	-0.32825					20	12	2	0	0	0	0.20789	1	1223	1223		11.511	0	1	89583	+		26078	23461	17558	17568	29741	29741					-0.11212327648740938
LEEEEERGVK	10	Unmodified	_LEEEEERGVK_					0	0	0		nc|ENSG00000288674|P49810-2|PSEN2;nc|ENSG00000288674|P49810-3|PSEN2;ENSG00000143801|ENST00000366783|PSEN2	nc|ENSG00000288674|P49810-2|PSEN2	nc|ENSG00000288674|P49810-2|PSEN2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	3	406.538458	1216.59355	-0.333	-0.00013538	1.4763	0.00060019	1.1433	0.00046481	406.5388391187982	31.326	0.16621	31.275	31.171	31.337	-0.051031					5	3	2	0	0	0	0.37624	1	1765	1765		6.3209	0	1	10548			26079	4663	17559	17569	29742	29742					-0.00608719778347222
LEEESFKRKRP	11	Unmodified	_LEEESFKRKRP_					0	0	0			REV__nc|ENSG00000108924|Q16534-2|HLF	REV__nc|ENSG00000108924|Q16534-2|HLF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.92950439453125	3	473.596531	1417.76776	-0.30223	-0.00014314	-2.4624	-0.0011662	-2.7647	-0.0013093	473.5957127008256	21.5	0.48449	21.435	21.219	21.704	-0.064743					30	15	3	0	0	0	0.76251	1	616	616		19.263	1.4295	1	35747	+		26080	17739	17560	17570	29743	29743					0.0755890543764508
LEEFLYLY	8	Unmodified	_LEEFLYLY_					0	0	0		ENST00000257181.9_1_1:52883535-52883676:+|nuORF	ENST00000257181.9_1_1:52883535-52883676:+|nuORF	ENST00000257181.9_1_1:52883535-52883676:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.22705078125	2	545.278783	1088.54301	0.44243	0.00024124	2.9732	0.0016212	3.4157	0.0018625	545.2785691137242	55.898	0.22133	55.997	55.906	56.127	0.099186					9	7	2	0	0	0	0.4196	1	4713	4713		28.254	0	1	44929			26081	9348	17561	17571	29744	29744					0.002284026346387691
LEEGLPVIL	9	Unmodified	_LEEGLPVIL_					0	0	0			REV__nc|ENSG00000187790|Q8IYD8-2|FANCM	REV__nc|ENSG00000187790|Q8IYD8-2|FANCM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7962951660156	2	491.794601	981.574648	-0.16137	-7.9361E-05	2.6017	0.0012795	2.4403	0.0012001	491.795730554191	52.394	1.7298	53.062	52.517	54.247	0.6673					112	41	4	0	0	0	0.67235	1	5367	5367		42.474	1.9018	1	2437000	+		26082	22949	17562	17572	29745	29745					0.08312395388577443
LEEGNDLKSF	10	Unmodified	_LEEGNDLKSF_					0	0	0		ENSG00000183340|ENST00000332349|JRKL	ENSG00000183340|ENST00000332349|JRKL	ENSG00000183340|ENST00000332349|JRKL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.7540283203125	2	576.282586	1150.55062	-0.24665	-0.00014214	-4.4424	-0.0025601	-4.6891	-0.0027022	576.7823802270345	54.664	1.0896	55.071	54.446	55.535	0.40663					55	25	3	0	0	0	0.37624	1	5614	5614		65.465	26.213	1	282270			26083	7524	17563	17573	29746	29746					-0.018634898357504426
LEEGQRLPAPP	11	Unmodified	_LEEGQRLPAPP_					0	0	0		nc|ENSG00000105639|P52333-2|JAK3;ENSG00000105639|ENST00000458235|JAK3	nc|ENSG00000105639|P52333-2|JAK3	nc|ENSG00000105639|P52333-2|JAK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	603.82275390625	2	603.827495	1205.64044	-0.14461	-8.7319E-05	-1.3893	-0.00083892	-1.5339	-0.00092624	603.8264988194737	44.009	0.56927	43.982	43.647	44.216	-0.026764					24	13	2	0	0	0	0.72106	1	3382	3382		28.081	0	1	138580			26084	2230	17564	17574	29747	29747					0.04584184563464078
LEEHQTVTD	9	Unmodified	_LEEHQTVTD_					0	0	0			REV__ENST00000480342.5_1_1:8525723-8716473:-|nuORF	REV__ENST00000480342.5_1_1:8525723-8716473:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.2535400390625	2	536.251286	1070.48802	-0.50122	-0.00026878	4.2028	0.0022537	3.7016	0.001985	536.2534543475545	83.426	2.1577	83.857	83.414	85.572	0.43108					138	52	5	0	0	0	0.35373	1	9730	9730		60.972	0.85368	1	5344500	+		26085	19744	17565	17575	29748	29748					-0.04440635903938528
LEEIKLPLP	9	Unmodified	_LEEIKLPLP_					0	0	0			REV__ENSG00000100813|ENST00000605057|ACIN1	REV__ENSG00000100813|ENST00000605057|ACIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3258666992188	2	526.323525	1050.6325	-0.18547	-9.7616E-05	2.5835	0.0013598	2.398	0.0012621	526.3248074069744	59.278	1.5395	59.372	58.359	59.898	0.094059					97	61	2	0	0	0	0.78536	1	5079	5079		29.15	1.2673	1	183600	+		26086	17222	17566	17576	29749	29749					0.10920657313999982
LEEIKLPLP	9	Unmodified	_LEEIKLPLP_					0	0	0			REV__ENSG00000100813|ENST00000605057|ACIN1	REV__ENSG00000100813|ENST00000605057|ACIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3242797851562	2	526.323525	1050.6325	-0.18304	-9.6338E-05	2.014	0.00106	1.8309	0.00096366	526.324520166758	61.08	1.3849	61.181	59.837	61.222	0.10082					92	55	2	0	0	0	0.77546	1	5165	5165		31.955	10.253	1	275350	+		26087	17222	17566	17576	29750	29750					0.10920657313999982
LEEIKLPLP	9	Unmodified	_LEEIKLPLP_					0	0	0			REV__ENSG00000100813|ENST00000605057|ACIN1	REV__ENSG00000100813|ENST00000605057|ACIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3240356445312	2	526.323525	1050.6325	-0.47524	-0.00025013	2.8927	0.0015225	2.4175	0.0012724	526.3249338013496	58.169	1.8631	58.152	57.321	59.184	-0.01643					135	84	2	0	0	0	0.78058	1	5044	5044		30.504	1.3541	1	207480	+		26088	17222	17566	17576	29751	29751					0.10920657313999982
LEEIKLPLP	9	Unmodified	_LEEIKLPLP_					0	0	0			REV__ENSG00000100813|ENST00000605057|ACIN1	REV__ENSG00000100813|ENST00000605057|ACIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3241577148438	2	526.323525	1050.6325	-0.53497	-0.00028157	2.7776	0.0014619	2.2427	0.0011804	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.7932	1	5171	5171		17.365	0.89182	1	220370	+		26089	17222	17566	17576	29752	29752					0.10920657313999982
LEEIKLPLP	9	Unmodified	_LEEIKLPLP_					0	0	0			REV__ENSG00000100813|ENST00000605057|ACIN1	REV__ENSG00000100813|ENST00000605057|ACIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3258666992188	2	526.323525	1050.6325	-0.67072	-0.00035302	3.1177	0.0016409	2.447	0.0012879	526.3250687277414	64.714	3.1276	64.752	62.47	65.598	0.037849					207	130	2	0	0	0	0.76996	2	5744	5729;5744		33.516	9.3128	1	198930	+		26090	17222	17566	17576	29753;29754	29754					0.10920657313999982
LEEIKLPLP	9	Unmodified	_LEEIKLPLP_					0	0	0			REV__ENSG00000100813|ENST00000605057|ACIN1	REV__ENSG00000100813|ENST00000605057|ACIN1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3242797851562	2	526.323525	1050.6325	-1.0877	-0.00057249	3.5936	0.0018914	2.5059	0.0013189	526.3253334792695	75.305	1.0647	75.393	74.984	76.049	0.087639					40	26	2	0	0	0	0.20789	1	6948	6948		30.504	17.544	1	68295	+		26091	17222	17566	17576	29755	29755					0.10920657313999982
LEEIWEGSP	9	Unmodified	_LEEIWEGSP_					0	0	0			REV__nc|ENSG00000151490|Q16827-5|PTPRO	REV__nc|ENSG00000151490|Q16827-5|PTPRO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8204956054688	2	530.253297	1058.49204	0.016655	8.8312E-06	-0.23862	-0.00012653	-0.22196	-0.0001177	530.2533581358824	79.766	0.84548	80.315	79.999	80.845	0.54945					31	19	2	0	0	0	0.20789	1	9138	9138		73.975	0	1	320090	+		26092	20254	17567	17577	29756	29756					-0.03486546410226765
LEEKHLTKTK	10	Unmodified	_LEEKHLTKTK_					0	0	0			REV__ENSG00000175073|ENST00000310421|VCPIP1	REV__ENSG00000175073|ENST00000310421|VCPIP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.58380126953125	3	409.574955	1225.70304	2.5313	0.0010368	-0.55129	-0.00022579	1.98	0.00081097	409.5745894245498	25.503	0.80807	25.072	24.717	25.525	-0.4311					47	18	4	0	0	0	0.37624	1	1287	1287		5.1424	0	1	381750	+		26093	22036	17568	17578	29757	29757					0.09921330631664205
LEEKLALL	8	Unmodified	_LEEKLALL_					0	0	0			REV__ENSG00000147082|ENST00000376042|CCNB3	REV__ENSG00000147082|ENST00000376042|CCNB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7908935546875	2	464.789318	927.564084	0.1718	7.9849E-05	2.8678	0.0013329	3.0395	0.0014127	464.7905115336865	34.402	1.3055	34.346	33.931	35.236	-0.055149					140	57	3	0	0	0	0.85277	1	1719	1719		25.45	0	1	289420	+		26094	20049	17569	17579	29758	29758					0.09740412734140591
LEEKVMELHK	10	Unmodified	_LEEKVMELHK_					0	0	0		ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-7|EPB41	ENSG00000159023|ENST00000343067|EPB41	ENSG00000159023|ENST00000343067|EPB41	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.2292175292969	3	419.228679	1254.66421	0.067899	2.8465E-05	0.30009	0.00012581	0.36799	0.00015427	419.5642488683216	26.887	0.13853	26.996	26.952	27.091	0.10901					6	5	2	0	0	0	0.37624	1	1053	1053		34.087	14.056	1	18256			26095	5507	17570	17580	29759	29759					0.047062820056225974
LEEKVMELHK	10	Unmodified	_LEEKVMELHK_					0	0	0		ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-7|EPB41	ENSG00000159023|ENST00000343067|EPB41	ENSG00000159023|ENST00000343067|EPB41	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	419.228679	1254.66421	1.5422	0.00064652	-4.0622	-0.001703	-2.5201	-0.0010565	419.2268624896583	27.437	0.2054	27.183	27.034	27.239	-0.25465	0.093316	-0.0047014	NaN	34.087	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64799			26096	5507	17570	17580							0.047062820056225974
LEELEAIKAR	10	Unmodified	_LEELEAIKAR_					0	0	0		chr14:23319830-23322181|62|53.29|0.0|22.35|+|0|BCL2L2-PABPN1,PABPN1|1;ENSG00000258643|ENST00000678502|BCL2L2-PABPN1	chr14:23319830-23322181|62|53.29|0.0|22.35|+|0|BCL2L2-PABPN1,PABPN1|1	chr14:23319830-23322181|62|53.29|0.0|22.35|+|0|BCL2L2-PABPN1,PABPN1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.2376098632812	2	586.337695	1170.66084	-1.3478	-0.00079028	0.40992	0.00024035	-0.9379	-0.00054992	586.3378243684957	45.071	0.77627	45.534	45.224	46	0.46313					34	18	3	0	0	0	0.37624	1	4202	4202		17.468	0	1	952620			26097	162	17571	17581	29760	29760					0.08233355223273975
LEELGLLI	8	Unmodified	_LEELGLLI_					0	0	0			REV__ENST00000273859.7_1_4:47593407-47593530:+|nuORF	REV__ENST00000273859.7_1_4:47593407-47593530:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.75457763671875	2	450.276044	898.537535	0.76553	0.0003447	-3.6061	-0.0016237	-2.8405	-0.001279	450.27428377117434	80.863	0.95019	80.919	80.388	81.338	0.055916					45	21	3	0	0	0	0.4196	1	8086	8086		13.775	1.5685	1	127160	+		26098	24560	17572	17582	29761	29761					0.08420723842812095
LEELILPINLH	11	Unmodified	_LEELILPINLH_					0	0	0			REV__ENSG00000165821|ENST00000537235|SALL2	REV__ENSG00000165821|ENST00000537235|SALL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78033447265625	3	435.258856	1302.75474	-0.010556	-4.5945E-06	2.388	0.0010394	2.3774	0.0010348	435.25828818589764	37.062	0.18276	37.001	36.855	37.038	-0.060333					5	4	2	0	0	0	0.1767	1	2087	2087		24.232	4.9691	1	24812	+		26099	15586	17573	17583	29762	29762					0.11547074325585527
LEELIVAL	8	Unmodified	_LEELIVAL_					0	0	0			REV__ENSG00000057704|ENST00000261226|TMCC3	REV__ENSG00000057704|ENST00000261226|TMCC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2717590332031	2	450.276044	898.537535	-1.2361	-0.0005566	-1.0127	-0.00045598	-2.2488	-0.0010126	450.2751411877604	102.1	1.4324	102.3	101.58	103.02	0.19483					64	34	3	0	0	0	0.88915	1	10720	10720		35.201	6.9464	1	299960	+		26100	16429	17574	17584	29763	29763					0.08420723842812095
LEELIVAL	8	Unmodified	_LEELIVAL_					0	0	0			REV__ENSG00000057704|ENST00000261226|TMCC3	REV__ENSG00000057704|ENST00000261226|TMCC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.27398681640625	2	450.276044	898.537535	-1.7762	-0.00079979	-1.1363	-0.00051165	-2.9125	-0.0013114	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.86288	1	12567	12567		26.796	1.3459	1	2494900	+		26101	16429	17574	17584	29764	29764					0.08420723842812095
LEELIVKYL	9	Unmodified	_LEELIVKYL_					0	0	0		nc|ENSG00000154359|Q17RB8-2|LONRF1;ENSG00000154359|ENST00000398246|LONRF1	nc|ENSG00000154359|Q17RB8-2|LONRF1	nc|ENSG00000154359|Q17RB8-2|LONRF1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3406372070312	2	560.336633	1118.65871	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.1	1	104.29	103.79	104.79	0.18887								0	0	0	0.30778	1	12667	12667		27.882	4.8398	1				26102	5275	17575	17585	29765	29765					0.10412926485469143
LEELKKAKRLE	11	Unmodified	_LEELKKAKRLE_					0	0	0			REV__ENSG00000120370|ENST00000367763|GORAB	REV__ENSG00000120370|ENST00000367763|GORAB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.9483337402344	3	452.94516	1355.81365	2.7606	0.0012504	4.368	0.0019785	7.1286	0.0032289	452.94702271290186	107.29	1.0208	107.26	106.62	107.64	-0.034134					78	23	5	0	0	0	0.74002	1	11879	11879		24.276	0.89802	1	3060000	+		26103	18411	17576	17586	29766	29766					0.1499755061988708
LEELLGLL	8	Unmodified	_LEELLGLL_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2734680175781	2	450.276044	898.537535	-0.14096	-6.3473E-05	-2.788	-0.0012553	-2.9289	-0.0013188	450.27464262035414	97.47	1.9024	97.527	96.988	98.891	0.056839					95	43	3	0	0	0	0.87276	1	10351	10351		29.842	5.6388	1	440070	+		26104	23067	17577	17587	29767	29767					0.08420723842812095
LEELLGLL	8	Unmodified	_LEELLGLL_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2742004394531	2	450.276044	898.537535	-1.7763	-0.00079984	-1.8855	-0.00084901	-3.6619	-0.0016489	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.86288	1	9630	9630		26.796	1.3459	1	35178000	+		26105	23067	17577	17587	29768	29768					0.08420723842812095
LEELLIKV	8	Unmodified	_LEELLIKV_					0	0	0			REV__nc|ENSG00000173120|Q9Y2K7-2|KDM2A	REV__nc|ENSG00000173120|Q9Y2K7-2|KDM2A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3072509765625	2	478.804968	955.595384	0.23734	0.00011364	1.7403	0.00083325	1.9776	0.00094689	478.8052722512074	40.349	0.98389	40.43	39.962	40.946	0.081345					59	33	3	0	0	0	0.4196	1	2485	2485		18.324	0	1	253080	+		26106	21890	17578	17588	29769	29769					0.11580985768239316
LEELLLGL	8	Unmodified	_LEELLLGL_					0	0	0			REV__nc|ENSG00000150527|Q96PC5-8|MIA2	REV__nc|ENSG00000150527|Q96PC5-8|MIA2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.7547302246094	2	450.276044	898.537535	-1.2813	-0.00057695	-1.6175	-0.00072833	-2.8988	-0.0013053	450.2752259126827	81.169	0.82657	81.169	80.79	81.616	0					47	27	2	0	0	0	0.4196	1	7520	7520		8.2313	0	1	60605	+		26107	29928	17579	17589	29770	29770					0.08420723842812095
LEELLTNNRI	10	Unmodified	_LEELLTNNRI_					0	0	0		ENST00000483804.5_1_1:161179060-161183980:+|nuORF;nc|ENSG00000158864|O75306-2|NDUFS2;ENSG00000158864|ENST00000676972|NDUFS2	ENST00000483804.5_1_1:161179060-161183980:+|nuORF	ENST00000483804.5_1_1:161179060-161183980:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.8994445800781	3	405.562827	1213.66665	1.3716	0.00055625	3.2979	0.0013375	4.6694	0.0018937	405.5640303977856	59.974	1.644	60.007	59.019	60.663	0.032822					112	41	3	0	0	0	0.86589	1	5498	5498		20.837	0	1	297440			26108	5502	17580	17590	29771	29771					0.0683645373494528
LEELLVPLG	9	Unmodified	_LEELLVPLG_					0	0	0			REV__ENSG00000115423|ENST00000389394|DNAH6	REV__ENSG00000115423|ENST00000389394|DNAH6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79534912109375	2	491.794601	981.574648	-1.4864	-0.00073099	4.0311	0.0019825	2.5447	0.0012515	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.7932	1	4556	4556		25.45	3.4903	1	781720	+		26109	18120	17581	17591	29772	29772					0.08312395388566074
LEELLVPLGLR	11	Unmodified	_LEELLVPLGLR_					0	0	0			REV__ENSG00000115423|ENST00000389394|DNAH6	REV__ENSG00000115423|ENST00000389394|DNAH6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3897094726562	2	626.387188	1250.75982	-0.053222	-3.3338E-05	-1.2155	-0.00076136	-1.2687	-0.0007947	626.386012542859	108.09	0.33427	108.09	107.96	108.29	0					20	13	2	0	0	0	0.7434	1	11266	11266		23.523	0	1	1764100	+		26110	18120	17582	17592	29773	29773					0.14447378188174298
LEELQEVVLAA	11	Unmodified	_LEELQEVVLAA_					0	0	0		ENSG00000178852|ENST00000331493|EFCAB13;nc|ENSG00000178852|Q8IY85-2|EFCAB13	ENSG00000178852|ENST00000331493|EFCAB13	ENSG00000178852|ENST00000331493|EFCAB13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.22509765625	3	405.227333	1212.66017	0.067074	2.718E-05	-0.50314	-0.00020388	-0.43606	-0.0001767	405.2271099047801	26.788	0.59341	26.897	26.654	27.247	0.10901					49	27	2	0	0	0	0.73277	1	1035	1035		25.892	0.76573	1	95384			26111	7228	17583	17593	29774	29774					0.062345157835807186
LEELSPVG	8	Unmodified	_LEELSPVG_					0	0	0			REV__ENST00000546722.1_1_12:107393683-107395617:-|nuORF	REV__ENST00000546722.1_1_12:107393683-107395617:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2283630371094	2	422.226551	842.438549	0.39883	0.0001684	3.0317	0.0012801	3.4305	0.0014484	422.22774353929225	63.715	1.0414	63.837	63.015	64.056	0.12252					65	43	2	0	0	0	0.884	1	5593	5593		33.516	3.0119	1	281200	+		26112	16137	17584	17594	29775	29775					0.011027008779137759
LEELSRKRG	9	Unmodified	_LEELSRKRG_					0	0	0			REV__nc|ENSG00000126012|P41229-2|KDM5C	REV__nc|ENSG00000126012|P41229-2|KDM5C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.3134155273438	2	544.314554	1086.61456	-0.61685	-0.00033576	-0.81801	-0.00044526	-1.4349	-0.00078102	544.313993071633	41.604	0.41374	41.608	41.378	41.792	0.0034142					18	9	2	0	0	0	0.7932	1	3075	3075		25.574	1.0549	1	271820	+		26113	18692	17585	17595	29776	29776					0.07471335111836197
LEELVALL	8	Unmodified	_LEELVALL_					0	0	0			REV__ENST00000370571.6_1_1:86334469-86342833:-|nuORF	REV__ENST00000370571.6_1_1:86334469-86342833:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2744445800781	2	450.276044	898.537535	-1.2506	-0.00056311	-2.4536	-0.0011048	-3.7041	-0.0016679	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.87276	1	9366	9366		29.842	4.3914	1	44812000	+		26114	25657	17586	17596	29777	29777					0.08420723842812095
LEELVVQPLLV	11	Unmodified	_LEELVVQPLLV_					0	0	0		ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	ENSG00000115484|ENST00000394440|CCT4	ENSG00000115484|ENST00000394440|CCT4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.9223937988281	3	417.923473	1250.74859	-0.96194	-0.00040202	-1.8361	-0.00076736	-2.7981	-0.0011694	417.922646807868	105.95	2.4445	105.95	105.29	107.73	0					194	56	4	0	0	0	0.73893	1	10918	10918		16.53	1.1967	1	9358100			26115	2848	17587	17597	29778	29778					0.13324556094039508
LEELVVQPLLV	11	Unmodified	_LEELVVQPLLV_					0	0	0		ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	ENSG00000115484|ENST00000394440|CCT4	ENSG00000115484|ENST00000394440|CCT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.92236328125	3	417.923473	1250.74859	-0.18602	-7.7743E-05	-2.5441	-0.0010632	-2.7301	-0.001141	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.7434	1	11548	11548		15.921	0	1	19495000			26116	2848	17587	17597	29779	29779					0.13324556094039508
LEELVVQPLLV	11	Unmodified	_LEELVVQPLLV_					0	0	0		ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	ENSG00000115484|ENST00000394440|CCT4	ENSG00000115484|ENST00000394440|CCT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3795776367188	2	626.381571	1250.74859	-0.22979	-0.00014393	-2.8845	-0.0018068	-3.1143	-0.0019508	626.3796521317021	105.9	2.4813	105.88	105.06	107.54	-0.025146					298	58	6	0	0	0	0.65746	1	11671	11671		37.812	0.30334	1	47647000			26117	2848	17587	17597	29780	29780					0.13324556094039508
LEELVVQPLLV	11	Unmodified	_LEELVVQPLLV_					0	0	0		ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	ENSG00000115484|ENST00000394440|CCT4	ENSG00000115484|ENST00000394440|CCT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.9223937988281	3	417.923473	1250.74859	-1.7716	-0.00074038	-0.98261	-0.00041066	-2.7542	-0.001151	417.92308931399344	105.49	2.9586	105.65	104.79	107.75	0.15925					261	73	4	0	0	0	0.73893	1	11299	11299		16.53	0	1	33626000			26118	2848	17587	17597	29781	29781					0.13324556094039508
LEELVVQPLLV	11	Unmodified	_LEELVVQPLLV_					0	0	0		ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4	ENSG00000115484|ENST00000394440|CCT4	ENSG00000115484|ENST00000394440|CCT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.9224548339844	3	417.923473	1250.74859	-1.8945	-0.00079175	-0.98838	-0.00041307	-2.8829	-0.0012048	417.92301973502657	105.61	2.7753	105.68	104.89	107.66	0.073112					226	67	4	0	0	0	0.69995	4	11285	11140;11189;11225;11285		21.78	5.2506	1	18308000			26119	2848	17587	17597	29782;29783;29784;29785	29785					0.13324556094039508
LEEMNCVFNLS	11	Unmodified	_LEEMNCVFNLS_					0	0	0		ENST00000498352.1_1_1:192548943-192548988:+|nuORF	ENST00000498352.1_1_1:192548943-192548988:+|nuORF	ENST00000498352.1_1_1:192548943-192548988:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.2550048828125	3	433.530029	1297.56826	4.7575	0.0020625	-4.1166	-0.0017847	0.64087	0.00027784	433.52741324925154	106.92	0.17785	107.07	106.93	107.1	0.14929					6	4	2	0	0	0	0.17243	1	13058	13058		22.562	2.2466	1	92459			26120	12824	17588	17598	29786	29786					-0.06862233896731595
LEENTKPPE	9	Unmodified	_LEENTKPPE_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7634887695312	2	528.764029	1055.5135	-0.29031	-0.00015351	0.29405	0.00015548	0.0037369	1.9759E-06	528.7639083664867	60.585	0.65085	60.974	60.605	61.256	0.38945					39	17	3	0	0	0	0.12688	2	6433	6422;6433		87.696	8.2454	1	1077900			26121	7747	17589	17599	29787;29788	29788					-0.012031613815224773
LEENTKPPE	9	Unmodified	_LEENTKPPE_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7672119140625	2	528.764029	1055.5135	-0.33637	-0.00017786	-0.040521	-2.1426E-05	-0.37689	-0.00019929	528.7638860734646	60.471	0.67105	61.024	60.688	61.359	0.55323					40	18	3	0	0	0	0.096131	2	6416	6416;6420		93.195	16.349	1	1144300			26122	7747	17589	17599	29789;29790	29789					-0.012031613815224773
LEEPHLFWNI	10	Unmodified	_LEEPHLFWNI_					0	0	0		ENST00000474056.5_1_13:115048391-115057011:+|nuORF;ENST00000479712.1_1_13:115052026-115057011:+|nuORF	ENST00000474056.5_1_13:115048391-115057011:+|nuORF	ENST00000474056.5_1_13:115048391-115057011:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.2222595214844	3	433.224034	1296.65027	0.63158	0.00027362	-3.873	-0.0016779	-3.2414	-0.0014043	433.22224808643284	61.796	0.94312	61.826	61.454	62.397	0.029575					63	25	3	0	0	0	0.81117	1	5749	5749		38.754	15.376	1	1002700			26123	12298	17590	17600	29791	29791					0.013813725688805789
LEEPVVLA	8	Unmodified	_LEEPVVLA_					0	0	0		ENST00000487654.5_1_1:46033819-46034819:+|nuORF;ENSG00000117448|ENST00000351829|AKR1A1	ENST00000487654.5_1_1:46033819-46034819:+|nuORF	ENST00000487654.5_1_1:46033819-46034819:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2522888183594	2	435.252569	868.490584	0.1561	6.7942E-05	-3.024	-0.0013162	-2.8679	-0.0012483	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.86791	1	8416	8416		28.254	1.4582	1	3292300			26124	2979	17591	17601	29792	29792					0.0510786429166501
LEEQNLSLL	9	Unmodified	_LEEQNLSLL_					0	0	0		nc|ENSG00000107175|O43889-3|CREB3;ENSG00000107175|ENST00000353704|CREB3;ENST00000486056.1_1_9:35733177-35736720:+|nuORF	nc|ENSG00000107175|O43889-3|CREB3	nc|ENSG00000107175|O43889-3|CREB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7899169921875	2	529.790047	1057.56554	-0.70401	-0.00037298	-0.13833	-7.3286E-05	-0.84234	-0.00044626	529.7898547932233	42.858	0.782	43.291	43.006	43.788	0.4334					53	18	4	0	0	0	0.066118	1	3835	3835		101.25	0	1	4489500			26125	2332	17592	17602	29793	29793					0.03906002032249489
LEEQNLSLL	9	Unmodified	_LEEQNLSLL_					0	0	0		nc|ENSG00000107175|O43889-3|CREB3;ENSG00000107175|ENST00000353704|CREB3;ENST00000486056.1_1_9:35733177-35736720:+|nuORF	nc|ENSG00000107175|O43889-3|CREB3	nc|ENSG00000107175|O43889-3|CREB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.78955078125	2	529.790047	1057.56554	-1.7537	-0.00092907	0.79203	0.00041961	-0.96163	-0.00050946	529.7902947763653	42.666	0.77892	43.364	43.052	43.83	0.69754					52	18	4	0	0	0	0.039957	2	3835	3823;3835		112.41	0	1	4852700			26126	2332	17592	17602	29794;29795	29795					0.03906002032249489
LEERGLVKVG	10	Unmodified	_LEERGLVKVG_					0	0	0		ENSG00000130224|ENST00000317135|LRCH2;nc|ENSG00000130224|Q5VUJ6-2|LRCH2	ENSG00000130224|ENST00000317135|LRCH2	ENSG00000130224|ENST00000317135|LRCH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3275146484375	2	550.327131	1098.63971	0.24684	0.00013584	-0.14913	-8.2072E-05	0.097706	5.377E-05	550.327086838159	99.973	1.2029	100.19	99.606	100.81	0.21511					73	27	4	0	0	0	0.82886	1	10402	10402		37.812	2.6595	1	361560			26127	3625	17593	17603	29796	29796					0.09433389914420331
LEERGQES	8	Unmodified	_LEERGQES_					0	0	0			REV__ENST00000550062.5_1_12:60098758-60127580:+|nuORF	REV__ENST00000550062.5_1_12:60098758-60127580:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.72491455078125	2	474.225071	946.435589	-0.93499	-0.00044339	-3.7911	-0.0017978	-4.7261	-0.0022412	474.2234010405558	66.547	1.5603	67.098	66.602	68.163	0.55071					86	44	4	0	0	0	0.89494	1	7249	7249		37.159	1.5408	1	724640	+		26128	28584	17594	17604	29797	29797					-0.03977174246881532
LEESGRGF	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LEESGRGF_					1	0	0		ENST00000393446.6_3_7:116849938-116861986:+|nuORF	ENST00000393446.6_3_7:116849938-116861986:+|nuORF	ENST00000393446.6_3_7:116849938-116861986:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.723388671875	2	468.724707	935.43486	-0.053184	-2.4929E-05	-2.5044	-0.0011739	-2.5576	-0.0011988	468.7234997816417	76.102	1.2883	76.497	75.784	77.072	0.39507					44	31	2	0	0	0	0.90465	1	8616	8616		40.573	10.069	1	389520			26129	11047	17595	17605	29798	29798					-0.035439688959286286
LEESIVGP	8	Unmodified	_LEESIVGP_					0	0	0			REV__ENSG00000033030|ENST00000633063|ZCCHC8	REV__ENSG00000033030|ENST00000633063|ZCCHC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.2279357910156	2	422.226551	842.438549	1.4046	0.00059308	2.1622	0.00091294	3.5668	0.001506	422.2272983859282	64.331	2.0044	64.358	63.19	65.195	0.027138					107	65	3	0	0	0	0.87276	1	6048	6048		29.842	3.0454	1	528250	+		26130	16280	17596	17606	29799	29799					0.011027008779137759
LEESLIKQRKI	11	Unmodified	_LEESLIKQRKI_					0	0	0			REV__ENSG00000164500|ENST00000297001|SPATA48	REV__ENSG00000164500|ENST00000297001|SPATA48	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.94830322265625	3	452.94516	1355.81365	2.7603	0.0012503	4.1844	0.0018953	6.9447	0.0031456	452.94691660848173	107.88	0.36398	107.85	107.55	107.92	-0.031487					25	8	4	0	0	0	0.74771	1	11940	11940		22.562	0.78116	1	5035400	+		26131	21088	17597	17607	29800	29800					0.1499755061988708
LEETELPGQG	10	Unmodified	_LEETELPGQG_					0	0	0		nc|ENSG00000129810|Q5FBB7-7|SGO1;nc|ENSG00000129810|Q5FBB7-5|SGO1;nc|ENSG00000129810|Q5FBB7-4|SGO1;chr3:20184034-20186059|63|20.37|0.36|5.81|-|ENST00000437051|SGO1,SGO1;chr3:20171232-20175005|63|16.78|0.17|6.64|-|ENST00000437051|SGO1,SGO1;nc|ENSG00000129810|Q5FBB7-3|SGO1;chr3:20171232-20176601|63|27.24|0.17|7.3|-|ENST00000452020|SGO1,SGO1;nc|ENSG00000129810|Q5FBB7-2|SGO1;ENSG00000129810|ENST00000412997|SGO1;nc|ENSG00000129810|Q5FBB7|SGO1	nc|ENSG00000129810|Q5FBB7-7|SGO1	nc|ENSG00000129810|Q5FBB7-7|SGO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.8240966796875	2	536.761486	1071.50842	-0.47402	-0.00025444	4.3843	0.0023533	3.9103	0.0020989	536.7638751204402	74.589	0.73544	74.98	74.665	75.4	0.39111					29	17	2	0	0	0	0.37624	1	8386	8386		25.574	2.0514	1	138610			26132	401	17598	17608	29801	29801					-0.024474652441313083
LEEVLQNKD	9	Unmodified	_LEEVLQNKD_					0	0	0		nc|ENSG00000023287|Q8TDY2-2|RB1CC1;ENSG00000023287|ENST00000025008|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.7842407226562	2	544.285128	1086.5557	-1.3237	-0.00072045	4.4578	0.0024263	3.1341	0.0017059	544.7891650415993	73.558	0.1814	73.945	73.829	74.011	0.38779					8	5	2	0	0	0	0.20789	1	8262	8262		39.253	18.306	1	155280			26133	856	17599	17609	29802	29802					0.015888140268771167
LEEVVEIRKRL	11	Unmodified	_LEEVVEIRKRL_					0	0	0			REV__ENSG00000164068|ENST00000327697|RNF123	REV__ENSG00000164068|ENST00000327697|RNF123	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.9483337402344	3	461.948793	1382.82455	-1.0613	-0.00049026	-0.82421	-0.00038074	-1.8855	-0.000871	461.94836376630775	107.84	0.21313	107.98	107.81	108.03	0.13866					10	5	2	0	0	0	0.73621	1	11606	11606		25.126	0.89417	1	146310000	+		26134	21022	17600	17610	29803	29803					0.14844952994189953
LEEVYNFL	8	Unmodified	_LEEVYNFL_					0	0	0			REV__ENST00000452760.2_1_17:20516367-20517318:+|nuORF	REV__ENST00000452760.2_1_17:20516367-20517318:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7570190429688	2	513.760758	1025.50696	-1.5252	-0.00078357	-3.3509	-0.0017216	-4.8761	-0.0025051	513.7589209576093	42.609	0.50017	43.306	43.132	43.632	0.69754					26	11	3	0	0	0	0.37302	1	3821	3821		87.754	2.8388	1	834400	+		26135	26901	17601	17611	29804	29804					-0.00477054542238875
LEEYRSKLSQ	10	Unmodified	_LEEYRSKLSQ_					0	0	0		ENST00000471733.5_1_3:196807912-197024075:-|nuORF;nc|ENSG00000075711|Q12959-3|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;ENSG00000075711|ENST00000667157|DLG1;nc|ENSG00000075711|Q12959|DLG1;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959-2|DLG1;ENST00000485409.5_1_3:196921289-197023334:-|nuORF;nc|ENSG00000075711|Q12959-5|DLG1;ENST00000486877.1_1_3:197009543-197024075:-|nuORF	ENST00000471733.5_1_3:196807912-197024075:-|nuORF	ENST00000471733.5_1_3:196807912-197024075:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.91552734375	3	418.222582	1251.64592	0.29304	0.00012256	0.74188	0.00031027	1.0349	0.00043283	418.2229658122562	31.059	0.52092	31.063	30.71	31.23	0.0037212					18	11	2	0	0	0	0.37624	1	2097	2097		14.694	1.1857	1	69329			26136	1342	17602	17612	29805	29805					0.030158633552900938
LEFEGGEVSL	10	Unmodified	_LEFEGGEVSL_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.2673950195312	2	540.266404	1078.51826	-0.64384	-0.00034784	0.41999	0.00022691	-0.22384	-0.00012093	540.266470367557	80.062	0.59042	80.478	80.21	80.801	0.41621					29	13	3	0	0	0	0.00030542	2	9178	9178;9190		143.89	58.971	1	851940			26137	3371	17603	17613	29806;29807	29806					-0.01786277238738876
LEFEHGQP	8	Unmodified	_LEFEHGQP_					0	0	0			REV__ENSG00000178538|ENST00000317995|CA8	REV__ENSG00000178538|ENST00000317995|CA8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.8023376464844	2	478.727249	955.439946	0.90263	0.00043211	-1.2211	-0.00058459	-0.31851	-0.00015248	478.72658273769235	50.637	0.45034	51.084	50.805	51.256	0.4476					17	10	2	0	0	0	0.4196	1	5001	5001		24.203	0	1	200300	+		26138	22284	17604	17614	29808	29808					-0.03955665033322475
LEFKAEKKL	9	Unmodified	_LEFKAEKKL_					0	0	0			REV__nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2	REV__nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3321533203125	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.7932	1	9878	9878		25.574	4.6271	1	2365500	+		26139	29954	17605	17615	29809	29809					0.10615462062582992
LEFKAEKKL	9	Unmodified	_LEFKAEKKL_					0	0	0			REV__nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2	REV__nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3323974609375	2	553.334424	1104.6543	-1.4413	-0.00079751	-2.1828	-0.0012078	-3.6241	-0.0020053	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.7932	1	9897	9897		26.693	2.1737	1	2490200	+		26140	29954	17605	17615	29810	29810					0.10615462062582992
LEFKRHFL	8	Unmodified	_LEFKRHFL_					0	0	0		nc|ENSG00000149554|O14757-2|CHEK1;chr11:125626833-125629232|52|11.75|0.65|4.17|+|ENST00000544373|CHEK1,CHEK1;nc|ENSG00000149554|O14757-3|CHEK1;ENSG00000149554|ENST00000438015|CHEK1;chr11:125655347-125675928|63|28.46|0.8|5.15|+|ENST00000428830|CHEK1,CHEK1;chr11:125626642-125626749|57|24.46|0.78|4.98|+|ENST00000532449|CHEK1,CHEK1	nc|ENSG00000149554|O14757-2|CHEK1	nc|ENSG00000149554|O14757-2|CHEK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3164672851562	2	545.313826	1088.6131	2.6012	0.0014185	2.8909	0.0015765	5.4922	0.0029949	545.3152041315631	102.23	0.80855	102.53	102.13	102.94	0.29864					51	18	4	0	0	0	0.91472	1	12488	12488		44.117	5.3632	1	936620			26141	97	17606	17616	29811	29811					0.07233745813755377
LEFLGGLVG	9	Unmodified	_LEFLGGLVG_					0	0	0		ENST00000466019.1_1_X:148577033-148579781:-|nuORF	ENST00000466019.1_1_X:148577033-148579781:-|nuORF	ENST00000466019.1_1_X:148577033-148579781:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.94830322265625	2	452.760561	903.506569	-1.1972	-0.00054202	-1.7955	-0.00081292	-2.9926	-0.0013549	452.75950576278524	107.08	0.75331	107.22	106.86	107.61	0.13866					29	18	2	0	0	0	0.20789	1	11462	11462		50.025	7.5501	1	161220			26142	12120	17607	17617	29812	29812					0.050955705285900876
LEFLGGLVG	9	Unmodified	_LEFLGGLVG_					0	0	0		ENST00000466019.1_1_X:148577033-148579781:-|nuORF	ENST00000466019.1_1_X:148577033-148579781:-|nuORF	ENST00000466019.1_1_X:148577033-148579781:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	452.760561	903.506569	-0.96187	-0.0004355	-2.3853	-0.00108	-3.3472	-0.0015155	452.7595710457468	107.31	0.62723	107.31	107.02	107.65	0	0.021577	0.0012522	NaN	50.025	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62134			26143	12120	17607	17617							0.050955705285900876
LEFLKLGDSIS	11	Unmodified	_LEFLKLGDSIS_					0	0	0		nc|ENSG00000049192|Q9UKP5-3|ADAMTS6;ENST00000381052.8_1_5:64593037-64747992:-|nuORF	nc|ENSG00000049192|Q9UKP5-3|ADAMTS6	nc|ENSG00000049192|Q9UKP5-3|ADAMTS6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.355224609375	2	611.339904	1220.66525	0.86184	0.00052687	-2.8379	-0.0017349	-1.976	-0.001208	611.3375702976496	95.289	0.24223	95.452	95.311	95.553	0.16316					6	5	2	0	0	0	0.17347	1	9775	9775		22.58	0	1	90272			26144	14748	17608	17618	29813	29813					0.06374819646180185
LEFLKQLKHL	10	Unmodified	_LEFLKQLKHL_					0	0	0		ENSG00000169418|ENST00000368680|NPR1	ENSG00000169418|ENST00000368680|NPR1	ENSG00000169418|ENST00000368680|NPR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8930053710938	2	634.889898	1267.76524	1.4999	0.00095225	2.3399	0.0014856	3.8398	0.0024378	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.74274	1	11274	11274		42.396	1.618	1	68597000			26145	6496	17609	17619	29814	29814					0.14207101770671215
LEFPELKGI	9	Unmodified	_LEFPELKGI_					0	0	0		ENSG00000166938|ENST00000319212|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;ENST00000525109.1_1_15:66585988-66599106:+|nuORF;ENST00000565281.5_1_15:66585934-66615040:+|nuORF	ENSG00000166938|ENST00000319212|DIS3L	ENSG00000166938|ENST00000319212|DIS3L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.30224609375	2	523.30005	1044.58555	2.5947	0.0013578	4.3498	0.0022763	6.9446	0.0036341	523.3022312142076	112.67	0.45686	112.7	112.4	112.85	0.030602					30	18	2	0	0	0	0.78536	1	13624	13624		29.15	4.9468	1	123010			26146	6250	17610	17620	29815	29815					0.0650379776286627
LEFRAPSLAR	10	Unmodified	_LEFRAPSLAR_					0	0	0		ENST00000339485.3_1_19:5909352-5909478:+|nuORF	ENST00000339485.3_1_19:5909352-5909478:+|nuORF	ENST00000339485.3_1_19:5909352-5909478:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.3341674804688	2	580.332747	1158.65094	0.57992	0.00033655	-0.80327	-0.00046616	-0.22335	-0.00012961	580.33221961555	39.911	0.8952	39.917	39.495	40.39	0.0065002					58	22	4	0	0	0	0.85981	1	2466	2466		35.152	0.97948	1	1007900			26147	10223	17611	17621	29816	29816					0.07796212008565817
LEFSYQAL	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LEFSYQAL_					1	0	0		ENST00000531870.5_1_11:33183268-33211605:+|nuORF	ENST00000531870.5_1_11:33183268-33211605:+|nuORF	ENST00000531870.5_1_11:33183268-33211605:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.7528076171875	2	506.752933	1011.49131	2.3756	0.0012038	-2.553	-0.0012937	-0.17736	-8.9878E-05	506.7515182161224	98.592	3.0666	98.969	97.268	100.33	0.37679					111	75	2	0	0	0	0.60357	1	11928	11928		71.296	17.944	1	6133500			26148	13366	17612	17622	29817	29817					-0.013973410592939217
LEFTVQPPT	9	Unmodified	_LEFTVQPPT_					0	0	0			REV__nc|ENSG00000159753|Q6F5E8-2|CARMIL2	REV__nc|ENSG00000159753|Q6F5E8-2|CARMIL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8984985351562	2	516.274032	1030.53351	0.53971	0.00027864	2.4048	0.0012415	2.9445	0.0015202	516.2750240706171	56.366	0.52566	56.926	56.659	57.185	0.55954					20	11	2	0	0	0	0.20789	1	5803	5803		40.778	18.818	1	571380	+		26149	20679	17613	17623	29818	29818					0.01946634349087617
LEFVMGGRVQ	10	Unmodified	_LEFVMGGRVQ_					0	0	0			REV__nc|ENSG00000290503|Q9HBA9|FOLH1B	REV__nc|ENSG00000290503|Q9HBA9|FOLH1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.8009033203125	2	568.300059	1134.58556	-0.90908	-0.00051663	4.1919	0.0023823	3.2829	0.0018657	568.3031011096622	58.524	0.70934	58.916	58.482	59.191	0.39209					26	16	3	0	0	0	0.37624	1	6080	6080		58.782	14.665	1	246550	+		26150	16909	17614	17624	29819	29819					0.02365474491216446
LEGALPLLA	9	Unmodified	_LEGALPLLA_					0	0	0			REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.7774353027344	2	448.776211	895.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.168	1	69.131	68.631	69.631	-0.036957								0	0	0	0.33301	1	6695	6695		19.36	0	1		+		26151	20680	17615	17625	29820	29820					0.08592143562680121
LEGAVKSKFK	10	Unmodified	_LEGAVKSKFK_					0	0	0		nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;ENSG00000133026|ENST00000360416|MYH10	nc|ENSG00000133026|P35580|MYH10	nc|ENSG00000133026|P35580|MYH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8301391601562	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.86272	1	8976	8976		24.519	0.31644	1	1489800			26152	3848	17616	17626	29821	29821					0.10094577919812764
LEGAVKSKFK	10	Unmodified	_LEGAVKSKFK_					0	0	0		nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;ENSG00000133026|ENST00000360416|MYH10	nc|ENSG00000133026|P35580|MYH10	nc|ENSG00000133026|P35580|MYH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.83056640625	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.86218	1	9478	9478		32.812	0.85756	1	5219600			26153	3848	17616	17626	29822	29822					0.10094577919812764
LEGAVKSKFK	10	Unmodified	_LEGAVKSKFK_					0	0	0		nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;ENSG00000133026|ENST00000360416|MYH10	nc|ENSG00000133026|P35580|MYH10	nc|ENSG00000133026|P35580|MYH10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8305053710938	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.86587	1	10852	10852		29.17	0.020503	1	5911200			26154	3848	17616	17626	29823	29823					0.10094577919812764
LEGAVRPDS	9	Unmodified	_LEGAVRPDS_					0	0	0			REV__ENST00000532328.5_1_11:64880864-64882880:+|nuORF	REV__ENST00000532328.5_1_11:64880864-64882880:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28753662109375	2	472.245806	942.47706	-1.7054	-0.00080535	-0.74031	-0.00034961	-2.4457	-0.001155	472.2453586955053	95.05	0.52942	95.252	94.986	95.515	0.20242					21	12	3	0	0	0	0.20789	1	9668	9668		27.882	0	1	173450	+		26155	28322	17617	17627	29824	29824					0.003520065124348548
LEGCIRTLRYF	11	Unmodified	_LEGCIRTLRYF_					0	0	0		ENSG00000184254|ENST00000329841|ALDH1A3	ENSG00000184254|ENST00000329841|ALDH1A3	ENSG00000184254|ENST00000329841|ALDH1A3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7910461425781	3	457.579823	1369.71764	-1.2327	-0.00056407	1.192	0.00054546	-0.040678	-1.8614E-05	457.9144085688537	42.326	0.1657	42.331	42.224	42.39	0.0043983					6	4	2	0	0	0	0.17729	1	2837	2837		23.378	0	1	46135			26156	7595	17618	17628	29825	29825					0.047570795081355755
LEGEEPEVL	9	Unmodified	_LEGEEPEVL_					0	0	0		ENST00000401087.3_3_1:149089877-149094694:-|nuORF	ENST00000401087.3_3_1:149089877-149094694:-|nuORF	ENST00000401087.3_3_1:149089877-149094694:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.75286865234375	2	507.75313	1013.49171	0.84789	0.00043052	-0.76332	-0.00038758	0.084565	4.2938E-05	507.7524998605722	62.525	1.3198	63.08	62.559	63.879	0.55449					81	30	4	0	0	0	0.62081	1	6692	6692		45.952	0	1	1695100			26157	11234	17619	17629	29826	29826					-0.014499661300874322
LEGEESRISL	10	Unmodified	_LEGEESRISL_					0	0	0		ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.796630859375	2	566.79586	1131.57717	1.2825	0.00072689	-1.4728	-0.00083479	-0.19036	-0.0001079	566.7949265213156	49.351	0.44262	50.196	49.952	50.395	0.84501					25	10	3	0	0	0	0.25577	1	4822	4822		77.533	13.326	1	795300			26158	869	17620	17630	29827	29827					0.016641990555854136
LEGEESRISL	10	Unmodified	_LEGEESRISL_					0	0	0		ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	566.79586	1131.57717	0.078484	4.4484E-05	-0.49083	-0.0002782	-0.41234	-0.00023371	566.7955787907408	49.489	0.65429	49.949	49.665	50.32	0.45983	-0.12342	0.00078731	NaN	77.533	32	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	813300			26159	869	17620	17630							0.016641990555854136
LEGELIHDLL	10	Unmodified	_LEGELIHDLL_					0	0	0		nc|ENSG00000149100|Q7L2H7-2|EIF3M;ENSG00000149100|ENST00000531120|EIF3M	nc|ENSG00000149100|Q7L2H7-2|EIF3M	nc|ENSG00000149100|Q7L2H7-2|EIF3M	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3193969726562	2	576.318971	1150.62339	-0.62538	-0.00036042	-0.7016	-0.00040435	-1.327	-0.00076476	576.3191509595497	78.398	0.63215	78.809	78.51	79.142	0.4106					29	14	3	0	0	0	0.16515	1	8950	8950		93.195	24.409	1	495860			26160	4996	17621	17631	29828	29828					0.05410263957674033
LEGELIHDLL	10	Unmodified	_LEGELIHDLL_					0	0	0		nc|ENSG00000149100|Q7L2H7-2|EIF3M;ENSG00000149100|ENST00000531120|EIF3M	nc|ENSG00000149100|Q7L2H7-2|EIF3M	nc|ENSG00000149100|Q7L2H7-2|EIF3M	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3194580078125	2	576.318971	1150.62339	-0.51124	-0.00029463	-0.35112	-0.00020236	-0.86235	-0.00049699	576.3189172865028	78.204	0.62619	78.768	78.537	79.163	0.56332					24	14	2	0	0	0	0.16515	2	8960	8960;8971		93.195	34.414	1	599510			26161	4996	17621	17631	29829;29830	29829					0.05410263957674033
LEGERLVE	8	Unmodified	_LEGERLVE_					0	0	0			REV__ENSG00000181649|ENST00000314222|PHLDA2	REV__ENSG00000181649|ENST00000314222|PHLDA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7563781738281	2	472.756007	943.497461	-0.42571	-0.00020126	0.70012	0.00033099	0.27441	0.00012973	472.756162330355	25.453	0.69131	25.416	25.118	25.81	-0.037176					45	20	3	0	0	0	0.87064	1	1000	1000		29.15	0	1	115270	+		26162	22470	17622	17632	29831	29831					0.023451771722420744
LEGESCSFEC	10	Unmodified	_LEGESCSFEC_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.2044677734375	2	552.204632	1102.39471	-0.46312	-0.00025574	2.3226	0.0012825	1.8595	0.0010268	552.2058964100563	32.148	1.4773	32.159	31.424	32.902	0.010902					70	39	2	0	0	0	0.86763	1	1732	1732		26.693	6.6961	1	92040			26163	15003;5274	17623	17633	29832	29832					-0.15239019673026633
LEGGAGPCRGL	11	Unmodified	_LEGGAGPCRGL_					0	0	0		ENST00000449870.5_2_19:10802311-10802632:+|nuORF	ENST00000449870.5_2_19:10802311-10802632:+|nuORF	ENST00000449870.5_2_19:10802311-10802632:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.2575073242188	2	515.260933	1028.50731	0.17955	9.2515E-05	-3.2537	-0.0016765	-3.0742	-0.001584	515.2590970344206	30.802	0.50757	30.792	30.585	31.093	-0.010656					23	12	2	0	0	0	0.7342	1	1652	1652		25.574	0.12388	1	53048			26164	11882	17624	17634	29833	29833					-0.005799580940447413
LEGGKLPP	8	Unmodified	_LEGGKLPP_					0	0	0		ENST00000505654.1_2_5:102201638-102201800:+|nuORF	ENST00000505654.1_2_5:102201638-102201800:+|nuORF	ENST00000505654.1_2_5:102201638-102201800:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.89898681640625	2	405.739628	809.464704	0.3923	0.00015917	-0.12095	-4.9075E-05	0.27135	0.0001101	405.7394074183431	62.883	0.41784	63.004	62.735	63.153	0.12104					20	18	2	0	0	0	0.4196	1	5504	5504		25.45	0	1	77400			26165	12926	17625	17635	29834	29834					0.05235014840047825
LEGGQEDFESS	11	Unmodified	_LEGGQEDFESS_					0	0	0		ENSG00000171403|ENST00000246662|KRT9;CON__P35527	ENSG00000171403|ENST00000246662|KRT9	ENSG00000171403|ENST00000246662|KRT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.2490234375	2	599.24894	1196.48333	-0.24638	-0.00014764	-0.057531	-3.4475E-05	-0.30391	-0.00018212	599.2488174666976	45.393	0.6005	45.374	45.1	45.7	-0.018585					29	13	3	0	0	0	0.05374	2	3577	3577;3590		101.46	40.231	1	302410		+	26166	598	17626	17636	29835;29836	29835					-0.1070556483737164
LEGGQEDFESS	11	Unmodified	_LEGGQEDFESS_					0	0	0		ENSG00000171403|ENST00000246662|KRT9;CON__P35527	ENSG00000171403|ENST00000246662|KRT9	ENSG00000171403|ENST00000246662|KRT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.2477416992188	2	599.24894	1196.48333	-0.43344	-0.00025974	0.3088	0.00018505	-0.12464	-7.4691E-05	599.2490612325009	45.374	0.60763	45.343	45.06	45.668	-0.031067					31	13	3	0	0	0	0.54689	1	3679	3679		48.602	2.1448	1	368110		+	26167	598	17626	17636	29837	29837					-0.1070556483737164
LEGGQEDFESS	11	Unmodified	_LEGGQEDFESS_					0	0	0		ENSG00000171403|ENST00000246662|KRT9;CON__P35527	ENSG00000171403|ENST00000246662|KRT9	ENSG00000171403|ENST00000246662|KRT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.2481079101562	2	599.24894	1196.48333	-1.5457	-0.00092627	0.92244	0.00055277	-0.62328	-0.0003735	599.2493694362536	45.352	0.65045	45.348	45.056	45.706	-0.0041618					33	14	3	0	0	0	0.10529	3	3593	3593;3603;3615		92.239	32.083	1	277270		+	26168	598	17626	17636	29838;29839;29840	29838					-0.1070556483737164
LEGILLPK	8	Unmodified	_LEGILLPK_					0	0	0			REV__nc|ENSG00000274150|A8MWK0|FADS2B	REV__nc|ENSG00000274150|A8MWK0|FADS2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.26837158203125	2	441.786579	881.558604	-1.2489	-0.00055176	1.4051	0.00062077	0.15622	6.9015E-05	441.78706232600416	60.949	0.93832	61.338	60.974	61.912	0.38945					43	28	2	0	0	0	0.4196	1	6547	6547		44.117	6.9577	1	1784000	+		26169	30265	17627	17637	29841	29841					0.11308733942337312
LEGKEGRPK	9	Unmodified	_LEGKEGRPK_					0	0	0		ENST00000538829.5_2_12:6797361-6798049:-|nuORF	ENST00000538829.5_2_12:6797361-6798049:-|nuORF	ENST00000538829.5_2_12:6797361-6798049:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.31207275390625	2	507.290548	1012.56654	-0.73214	-0.00037141	2.2665	0.0011498	1.5344	0.00077839	507.7920491500523	63.102	0.21633	63.49	63.402	63.618	0.38779					6	4	2	0	0	0	0.20789	1	6782	6782		26.693	0	1	40421			26170	13471	17628	17638	29842	29842					0.06076261191810772
LEGLFNSHKL	10	Unmodified	_LEGLFNSHKL_					0	0	0			REV__ENST00000477225.1_1_3:49160862-49161360:-|nuORF	REV__ENST00000477225.1_1_3:49160862-49161360:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.843994140625	2	579.319306	1156.62406	0.53555	0.00031026	-0.30515	-0.00017678	0.2304	0.00013347	579.319035049404	102.16	0.60975	102.2	101.93	102.54	0.043198					20	14	2	0	0	0	0.37624	1	11067	11067		24.519	0	1	268950	+		26171	27351	17629	17639	29843	29843					0.05201103397371298
LEGLLLTILTN	11	Unmodified	_LEGLLLTILTN_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.57952880859375	3	400.579706	1198.71729	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.18	1	114.19	113.69	114.69	0.0094528								0	0	0	0.56276	1	13784	13784		25.892	0.76573	1		+		26172	17579	17630	17640	29844	29844					0.12587983059961516
LEGLSPRR	8	Unmodified	_LEGLSPRR_					0	0	0			REV__ENSG00000051009|ENST00000449352|FHIP1B	REV__ENSG00000051009|ENST00000449352|FHIP1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25347900390625	2	464.272158	926.529764	0.63211	0.00029347	-0.23008	-0.00010682	0.40203	0.00018665	464.2719551477907	85.617	1.3589	85.766	85.254	86.612	0.14857					51	31	2	0	0	0	0.4196	1	8338	8338		42.474	3.6683	1	96104	+		26173	16380	17631	17641	29845	29845					0.06356009365902082
LEGLVAWVLNT	11	Unmodified	_LEGLVAWVLNT_					0	0	0		nc|ENSG00000048707|Q5THJ4-2|VPS13D;ENSG00000048707|ENST00000620676|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5647277832031	3	405.564168	1213.67067	0.36519	0.00014811	1.0895	0.00044187	1.4547	0.00058997	405.56448085156467	59.925	1.6913	60.042	59.092	60.783	0.11676					133	55	3	0	0	0	0.70737	1	5171	5171		21.032	0.19508	1	327870			26174	977	17632	17642	29846	29846					0.0723854322866373
LEGPVTEV	8	Unmodified	_LEGPVTEV_					0	0	0			REV__nc|ENSG00000167202|Q9UPU7-2|TBC1D2B	REV__nc|ENSG00000167202|Q9UPU7-2|TBC1D2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2279357910156	2	422.226551	842.438549	-0.188	-7.9378E-05	3.672	0.0015504	3.484	0.001471	422.22800326383765	64.571	1.1453	64.57	64.134	65.279	-0.00078583					74	34	3	0	0	0	0.86288	1	6056	6056		26.796	0.10319	1	496030	+		26175	21366	17633	17643	29847	29847					0.011027008779137759
LEGRIARLIQN	11	Unmodified	_LEGRIARLIQN_					0	0	0		ENSG00000153790|ENST00000283905|C7orf31	ENSG00000153790|ENST00000283905|C7orf31	ENSG00000153790|ENST00000283905|C7orf31	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.882568359375	2	641.883136	1281.75172	2.6248	0.0016848	-3.6695	-0.0023554	-1.0447	-0.00067061	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.72739	1	11677	11677		27.047	3.5246	1	4455800			26176	5241	17634	17644	29848	29848					0.12211243991418996
LEGSWVLY	8	Unmodified	_LEGSWVLY_					0	0	0		ENSG00000118231|ENST00000264376|CRYGD	ENSG00000118231|ENST00000264376|CRYGD	ENSG00000118231|ENST00000264376|CRYGD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7499694824219	2	483.750193	965.485833	0.13514	6.5374E-05	-0.13425	-6.4946E-05	0.00088665	4.2892E-07	483.7499341815547	79.124	0.72253	79.534	79.226	79.949	0.4106					41	16	4	0	0	0	0.94132	1	9066	9066		54.765	6.8491	1	519580			26177	3019	17635	17645	29849	29849					0.0017098014889143087
LEGVKAKQ	8	Unmodified	_LEGVKAKQ_					0	0	0			REV__ENSG00000126934|ENST00000262948|MAP2K2	REV__ENSG00000126934|ENST00000262948|MAP2K2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2689514160156	2	436.763635	871.512717	1.7626	0.00076985	-0.96852	-0.00042301	0.79409	0.00034683	436.7629205376576	26.512	1.1482	26.479	25.815	26.963	-0.032125					62	27	3	0	0	0	0.85277	1	1065	1065		25.45	1.2474	1	159520	+		26178	18718	17636	17646	29850	29850					0.071820887600893
LEGVLRLM	8	Unmodified	_LEGVLRLM_					0	0	0		ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7771911621094	2	465.775688	929.536823	0.5788	0.00026959	3.5248	0.0016418	4.1036	0.0019114	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.87479	1	7621	7621		30.504	2.2494	1	344270			26179	7849	17637	17647	29851	29851					0.06923605922099796
LEGVRRPVLQV	11	Unmodified	_LEGVRRPVLQV_					0	0	0			REV__ENST00000589611.1_1_18:43669658-43669820:-|nuORF	REV__ENST00000589611.1_1_18:43669658-43669820:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.592529296875	3	422.594461	1264.76155	-1.7406	-0.00073557	-2.5077	-0.0010597	-4.2483	-0.0017953	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.75779	1	3899	3899		20.315	1.784	1	1126900	+		26180	29165	17638	17648	29852	29852					0.13976431996798055
LEGVRRPVLQV	11	Unmodified	_LEGVRRPVLQV_					0	0	0			REV__ENST00000589611.1_1_18:43669658-43669820:-|nuORF	REV__ENST00000589611.1_1_18:43669658-43669820:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5927734375	3	422.594461	1264.76155	-0.015219	-6.4315E-06	-4.1372	-0.0017484	-4.1524	-0.0017548	422.5925783921211	58.971	2.9474	58.94	58.062	61.01	-0.030884					151	84	3	0	0	0	0.72374	1	5497	5497		27.644	1.5805	1	166800	+		26181	29165	17638	17648	29853	29853					0.13976431996798055
LEHLCCDL	8	Unmodified	_LEHLCCDL_					0	0	0		nc|ENSG00000167528|Q96N77-2|ZNF641;nc|ENSG00000167528|Q96N77-3|ZNF641;ENSG00000167528|ENST00000547026|ZNF641;nc|ENSG00000167528|Q96N77|ZNF641	nc|ENSG00000167528|Q96N77-2|ZNF641	nc|ENSG00000167528|Q96N77-2|ZNF641	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.7671813964844	2	473.212063	944.409574	-0.80722	-0.00038198	2.8994	0.0013721	2.0922	0.00099007	473.2129546491864	84.009	1.2259	84.464	83.937	85.163	0.45556					59	29	3	0	0	0	0.4196	1	9764	9764		37.159	10.466	1	435260			26182	6298	17639	17649	29854	29854					-0.06485483014375859
LEHLCCDL	8	Unmodified	_LEHLCCDL_					0	0	0		nc|ENSG00000167528|Q96N77-2|ZNF641;nc|ENSG00000167528|Q96N77-3|ZNF641;ENSG00000167528|ENST00000547026|ZNF641;nc|ENSG00000167528|Q96N77|ZNF641	nc|ENSG00000167528|Q96N77-2|ZNF641	nc|ENSG00000167528|Q96N77-2|ZNF641	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	473.212063	944.409574	-0.30737	-0.00014545	2.1941	0.0010383	1.8867	0.00089282	473.212680126258	83.929	1.1024	84.365	83.96	85.063	0.43538	-0.049814	-0.00031924	NaN	29.15	57	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	419910			26183	6298	17639	17649							-0.06485483014375859
LEHRVRVLSV	10	Unmodified	_LEHRVRVLSV_					0	0	0		ENST00000463795.5_1_22:30682689-30685486:-|nuORF;ENSG00000239282|ENST00000407689|CASTOR1	ENST00000463795.5_1_22:30682689-30685486:-|nuORF	ENST00000463795.5_1_22:30682689-30685486:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8690795898438	2	604.367121	1206.71969	2.4669	0.0014909	-2.8595	-0.0017282	-0.39262	-0.00023729	604.3653535366857	106.62	0.69669	106.75	106.42	107.11	0.12742					48	30	2	0	0	0	0.85251	1	12992	12992		19.997	0.89325	1	128570			26184	8765	17640	17650	29855	29855					0.12459876308275852
LEIAQPVV	8	Unmodified	_LEIAQPVV_					0	0	0			REV__ENSG00000129158|ENST00000265965|SERGEF	REV__ENSG00000129158|ENST00000265965|SERGEF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.76214599609375	2	434.760561	867.506569	-0.5629	-0.00024473	1.0676	0.00046413	0.50466	0.00021941	434.76067973092415	87.168	2.0805	87.623	86.978	89.058	0.45429					87	50	3	0	0	0	0.86288	1	10238	10238		26.796	2.5934	1	1032200	+		26185	18807	17641	17651	29856	29856					0.06751570528581397
LEIDKWKD	8	Unmodified	_LEIDKWKD_					0	0	0			REV__ENST00000524192.6_1_20:61904210-61909556:+|nuORF	REV__ENST00000524192.6_1_20:61904210-61909556:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2802734375	2	523.779482	1045.54441	-0.91295	-0.00047818	-3.9602	-0.0020743	-4.8732	-0.0025525	523.7772259766621	44.6	0.64964	45.444	45.222	45.872	0.84438					29	15	3	0	0	0	0.4196	1	4162	4162		37.159	5.6293	1	1571700	+		26186	17252	17642	17652	29857	29857					0.023460367233838042
LEIELTQLN	9	Unmodified	_LEIELTQLN_					0	0	0			REV__ENSG00000186393|ENST00000335552|KRT26	REV__ENSG00000186393|ENST00000335552|KRT26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7968139648438	2	536.797872	1071.58119	-1.3657	-0.00073313	0.52527	0.00028197	-0.84047	-0.00045116	536.7980220344277	47.328	0.86889	48.252	47.915	48.784	0.92315					58	21	4	0	0	0	0.21969	1	4547	4547		71.877	4.3838	1	4699500	+	+	26187	16025	17643	17653	29858	29858					0.04826288549293167
LEIGPLLQ	8	Unmodified	_LEIGPLLQ_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7679138183594	2	441.768386	881.522219	1.5192	0.00067115	-2.2878	-0.0010107	-0.76859	-0.00033954	441.7673408334102	107.1	1.0458	107.2	106.82	107.87	0.10395					97	38	4	0	0	0	0.884	1	13037	13037		33.516	5.2613	1	2679600	+		26188	23015	17644	17654	29859	29859					0.07671857045625075
LEIIKNEFK	9	Unmodified	_LEIIKNEFK_					0	0	0		nc|ENSG00000164989|Q6TFL3-3|CCDC171;ENSG00000164989|ENST00000380701|CCDC171;nc|ENSG00000164989|Q6TFL3-4|CCDC171	nc|ENSG00000164989|Q6TFL3-3|CCDC171	nc|ENSG00000164989|Q6TFL3-3|CCDC171	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3304443359375	2	567.331882	1132.64921	-1.2007	-0.00068122	-1.9524	-0.0011076	-3.1531	-0.0017889	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.7932	1	9353	9353		14.865	0.20078	1	5763000			26189	6036	17645	17655	29860	29860					0.0881915819995811
LEIIRVDM	8	Unmodified	_LEIIRVDM_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.77972412109375	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.872	1	84.02	83.52	84.52	0.14793								0	0	0	0.29245	1	8143	8143		30.504	5.0535	1				26190	5333	17646	17656	29861	29861					0.0480328471392113
LEILGGVIKQF	11	Unmodified	_LEILGGVIKQF_					0	0	0			REV__nc|ENSG00000109083|Q8IY31-4|IFT20	REV__nc|ENSG00000109083|Q8IY31-4|IFT20	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24627685546875	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.392	1	20.322	19.822	20.822	-0.070013								0	0	0	0.56276	1	510	510		42.338	17.212	1		+		26191	17745	17647	17657	29862	29862					0.12347706642412959
LEILQRLCLH	10	Unmodified	_LEILQRLCLH_					0	0	0		nc|ENSG00000141161|Q8IWX7-2|UNC45B;ENSG00000141161|ENST00000394570|UNC45B;nc|ENSG00000141161|Q8IWX7|UNC45B	nc|ENSG00000141161|Q8IWX7-2|UNC45B	nc|ENSG00000141161|Q8IWX7-2|UNC45B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.767333984375	3	413.241031	1236.70126	-0.073267	-3.0277E-05	0.13597	5.619E-05	0.062708	2.5913E-05	413.24096959037905	38.921	1.0497	39.263	38.737	39.787	0.34187					36	24	2	0	0	0	0.37624	1	3269	3269		21.686	0	1	51671			26192	4480	17648	17658	29863	29863					0.09237998342064202
LEILQRLCLH	10	Unmodified	_LEILQRLCLH_					0	0	0		nc|ENSG00000141161|Q8IWX7-2|UNC45B;ENSG00000141161|ENST00000394570|UNC45B;nc|ENSG00000141161|Q8IWX7|UNC45B	nc|ENSG00000141161|Q8IWX7-2|UNC45B	nc|ENSG00000141161|Q8IWX7-2|UNC45B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7671203613281	3	413.241031	1236.70126	0.85645	0.00035392	0.62415	0.00025792	1.4806	0.00061184	413.5756024037474	37.622	0.8473	37.935	37.621	38.468	0.31312					53	21	4	0	0	0	0.37624	1	2992	2992		20.837	0	1	192690			26193	4480	17648	17658	29864	29864					0.09237998342064202
LEILWRIGKRM	11	Unmodified	_LEILWRIGKRM_					0	0	0			REV__ENSG00000183735|ENST00000331710|TBK1	REV__ENSG00000183735|ENST00000331710|TBK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.282470703125	3	472.28323	1413.82786	-0.90644	-0.0004281	0.34738	0.00016406	-0.55907	-0.00026404	472.2829852906886	101.65	1.9803	101.85	100.8	102.78	0.2058					96	48	4	0	0	0	0.79224	1	10641	10641		12.957	0.52465	1	449410	+		26194	22622	17649	17659	29865	29865					0.13749924567196103
LEIPLALLVV	10	Unmodified	_LEIPLALLVV_					0	0	0		nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-3|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13;ENSG00000010165|ENST00000361735|METTL13	nc|ENSG00000010165|Q8N6R0-1|METTL13	nc|ENSG00000010165|Q8N6R0-1|METTL13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.358642578125	2	540.357368	1078.70018	-0.017297	-9.3466E-06	2.5708	0.0013891	2.5535	0.0013798	540.3585627881598	36.881	1.2861	36.905	36.409	37.695	0.023624					76	34	3	0	0	0	0.88106	1	2067	2067		12.207	0	1	515190			26195	762	17650	17660	29866	29866					0.16398107244822313
LEIPLALLVV	10	Unmodified	_LEIPLALLVV_					0	0	0		nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-3|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13;ENSG00000010165|ENST00000361735|METTL13	nc|ENSG00000010165|Q8N6R0-1|METTL13	nc|ENSG00000010165|Q8N6R0-1|METTL13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.35888671875	2	540.357368	1078.70018	0.26404	0.00014267	2.2426	0.0012118	2.5067	0.0013545	540.3583702946399	36.686	1.1714	36.789	36.281	37.453	0.10306					78	34	3	0	0	0	0.88106	1	2069	2069		12.207	0	1	384450			26196	762	17650	17660	29867	29867					0.16398107244822313
LEIPLALLVV	10	Unmodified	_LEIPLALLVV_					0	0	0		nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-3|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13;ENSG00000010165|ENST00000361735|METTL13	nc|ENSG00000010165|Q8N6R0-1|METTL13	nc|ENSG00000010165|Q8N6R0-1|METTL13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.357666015625	2	540.357368	1078.70018	0.33888	0.00018312	2.2349	0.0012076	2.5738	0.0013908	540.3583651603944	36.668	1.2319	36.608	36.237	37.469	-0.060333					76	35	3	0	0	0	0.85438	2	2032	2032;2041		16.473	2.6978	1	376760			26197	762	17650	17660	29868;29869	29868					0.16398107244822313
LEIRAIPKKAF	11	Unmodified	_LEIRAIPKKAF_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR;ENST00000509961.5_1_5:7885900-7890405:+|nuORF	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4056396484375	2	643.403173	1284.79179	0.024155	1.5542E-05	4.4022	0.0028324	4.4263	0.0028479	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.73893	1	11153	11153		24.519	0.99649	1	11188000			26198	3326	17651	17661	29870	29870					0.16078790661981657
LEIRAIPKKAF	11	Unmodified	_LEIRAIPKKAF_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR;ENST00000509961.5_1_5:7885900-7890405:+|nuORF	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4055786132812	2	643.403173	1284.79179	2.6785	0.0017233	1.5954	0.0010265	4.2739	0.0027498	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.51007	2	11726	11690;11726		51.193	18.38	1	14704000			26199	3326	17651	17661	29871;29872	29872					0.16078790661981657
LEIRAIPKKAF	11	Unmodified	_LEIRAIPKKAF_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR;ENST00000509961.5_1_5:7885900-7890405:+|nuORF	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4065551757812	2	643.403173	1284.79179	2.6792	0.0017238	3.2892	0.0021163	5.9684	0.0038401	643.4052640495355	107.03	1.0145	106.99	106.79	107.81	-0.034134					59	23	3	0	0	0	0.69995	1	11872	11872		31.53	5.9558	1	2103900			26200	3326	17651	17661	29873	29873					0.16078790661981657
LEIRAIPKKAF	11	Unmodified	_LEIRAIPKKAF_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR;ENST00000509961.5_1_5:7885900-7890405:+|nuORF	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4058227539062	2	643.403173	1284.79179	1.7783	0.0011441	2.5766	0.0016578	4.3549	0.0028019	643.4046886151041	105.77	1.7293	105.8	105.04	106.77	0.038322					167	40	5	0	0	0	0.65746	4	11592	11508;11592;11631;11684		37.812	4.9169	1	14066000			26201	3326	17651	17661	29874;29875;29876;29877	29875					0.16078790661981657
LEIRAIPKKAF	11	Unmodified	_LEIRAIPKKAF_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR;ENST00000509961.5_1_5:7885900-7890405:+|nuORF	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4064331054688	2	643.403173	1284.79179	1.6039	0.001032	2.8597	0.0018399	4.4636	0.0028719	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.61369	6	11347	11276;11312;11347;11457;11505;11554		42.864	14.783	1	21138000			26202	3326	17651	17661	29878;29879;29880;29881;29882;29883	29880					0.16078790661981657
LEIRAIPKKAF	11	Unmodified	_LEIRAIPKKAF_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR;ENST00000509961.5_1_5:7885900-7890405:+|nuORF	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.40576171875	2	643.403173	1284.79179	0.94326	0.0006069	3.082	0.001983	4.0253	0.0025899	643.4049918963857	105.64	1.1738	105.75	104.98	106.16	0.10766					144	29	6	0	0	0	0.66929	1	11203	11203		36.447	3.6343	1	23114000			26203	3326	17651	17661	29884	29884					0.16078790661981657
LEIRAIPKKAF	11	Unmodified	_LEIRAIPKKAF_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR;ENST00000509961.5_1_5:7885900-7890405:+|nuORF	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.40576171875	2	643.403173	1284.79179	0.94326	0.0006069	4.1966	0.0027001	5.1399	0.003307	643.4057417471539	106.19	1.8486	106.29	106.11	107.96	0.099007					180	44	5	0	0	0	0.61369	2	11441	11381;11441		42.864	17.29	1	16037000			26204	3326	17651	17661	29885;29886	29886					0.16078790661981657
LEIRAIPKKAF	11	Unmodified	_LEIRAIPKKAF_					0	0	0		nc|ENSG00000124275|Q9UBK8-1|MTRR;ENSG00000124275|ENST00000440940|MTRR;ENST00000509961.5_1_5:7885900-7890405:+|nuORF	nc|ENSG00000124275|Q9UBK8-1|MTRR	nc|ENSG00000124275|Q9UBK8-1|MTRR	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	643.403173	1284.79179	5.4431	0.0035021	0.05995	3.8572E-05	5.5031	0.0035407	643.4034130492915	105.51	1.5585	105.7	104.97	106.53	0.18647	-0.077243	-0.0042728	NaN	51.193	125	47	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	751890			26205	3326	17651	17661							0.16078790661981657
LEIRGPCL	8	Unmodified	_LEIRGPCL_					0	0	0		nc|ENSG00000158816|Q5TIE3-5|VWA5B1;ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1;nc|ENSG00000158816|Q5TIE3-4|VWA5B1	nc|ENSG00000158816|Q5TIE3-5|VWA5B1	nc|ENSG00000158816|Q5TIE3-5|VWA5B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.75396728515625	2	450.752213	899.489873	0.36741	0.00016561	4.3918	0.0019796	4.7592	0.0021452	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.89494	1	8090	8090		37.159	3.6435	1	394230			26206	5498	17652	17662	29887	29887					0.036107463709754484
LEISKETKDK	10	Unmodified	_LEISKETKDK_					0	0	0		nc|ENSG00000071073|Q9UM21-2|MGAT4A;ENSG00000071073|ENST00000393487|MGAT4A	nc|ENSG00000071073|Q9UM21-2|MGAT4A	nc|ENSG00000071073|Q9UM21-2|MGAT4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	595.8375854492188	2	595.834985	1189.65542	0.65761	0.00039183	-1.8923	-0.0011275	-1.2347	-0.00073565	595.8341418025506	17.342	0.22594	16.859	16.718	16.944	-0.48256					7	4	2	0	0	0	0.85981	1	253	253		35.152	0.97948	1	82598			26207	1255	17653	17663	29888	29888					0.06817631640819855
LEISKETKDK	10	Unmodified	_LEISKETKDK_					0	0	0		nc|ENSG00000071073|Q9UM21-2|MGAT4A;ENSG00000071073|ENST00000393487|MGAT4A	nc|ENSG00000071073|Q9UM21-2|MGAT4A	nc|ENSG00000071073|Q9UM21-2|MGAT4A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	595.834985	1189.65542	0.14278	8.5075E-05	-1.9261	-0.0011476	-1.7833	-0.0010626	595.8340288901165	17.432	0.31325	16.821	16.659	16.972	-0.6107	-0.019287	-1.5754E-05	NaN	35.152	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72045			26208	1255	17653	17663							0.06817631640819855
LEISKTIN	8	Unmodified	_LEISKTIN_					0	0	0		ENST00000514415.1_1_12:54380145-54383227:+|nuORF;ENST00000511575.1_1_12:54379937-54383227:+|nuORF;ENSG00000180818|ENST00000303460|HOXC10	ENST00000514415.1_1_12:54380145-54383227:+|nuORF	ENST00000514415.1_1_12:54380145-54383227:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	459.26922607421875	2	459.26875	916.522947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.221	1	75.175	74.675	75.675	-0.045982								0	0	0	0.29724	1	7410	7410		24.519	0	1				26209	7351	17654	17664	29889	29889					0.06134651694662807
LEITKTKVM	9	Unmodified	_LEITKTKVM_					0	0	0			REV__nc|ENSG00000013503|Q9NW08-2|POLR3B	REV__nc|ENSG00000013503|Q9NW08-2|POLR3B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8167724609375	2	531.81501	1061.61547	1.0705	0.00056928	2.5512	0.0013568	3.6216	0.001926	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.7932	1	10418	10418		24.519	0.99649	1	4490200	+		26210	16197	17655	17665	29890	29890					0.0871241343654674
LEIVPAFLM	9	Unmodified	_LEIVPAFLM_					0	0	0			REV__ENSG00000156414|ENST00000409874|TDRD9	REV__ENSG00000156414|ENST00000409874|TDRD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7933959960938	2	516.793546	1031.57254	-1.5587	-0.00080555	1.3709	0.00070845	-0.18788	-9.7096E-05	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.76996	1	8682	8682		33.516	3.0119	1	755180	+		26211	20485	17656	17666	29891	29891					0.05801643379095367
LEIYIIVEK	9	Unmodified	_LEIYIIVEK_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3404541015625	2	560.336633	1118.65871	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.12	1	104.39	103.89	104.89	0.26524								0	0	0	0.29475	1	12713	12713		32.812	2.3088	1				26212	6419	17657	17667	29892	29892					0.10412926485469143
LEKAFAIRLF	10	Unmodified	_LEKAFAIRLF_					0	0	0		nc|ENSG00000162065|Q9ULP9-2|TBC1D24;ENSG00000162065|ENST00000646147|TBC1D24	nc|ENSG00000162065|Q9ULP9-2|TBC1D24	nc|ENSG00000162065|Q9ULP9-2|TBC1D24	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3662109375	2	604.363516	1206.71248	2.3603	0.0014265	2.8185	0.0017034	5.1787	0.0031298	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.85834	1	12814	12814		11.511	0	1	5984800			26213	15043	17658	17668	29893	29893					0.11739143707836774
LEKAHLALIDY	11	Unmodified	_LEKAHLALIDY_					0	0	0		ENSG00000166887|ENST00000318006|VPS39;nc|ENSG00000166887|Q96JC1|VPS39	ENSG00000166887|ENST00000318006|VPS39	ENSG00000166887|ENST00000318006|VPS39	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3700561523438	2	643.36117	1284.70779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.82	1	114.79	114.29	115.29	-0.02433								0	0	0	0.56276	1	12725	12725		29.17	1.0886	1				26214	6241	17659	17669	29894	29894					0.07682214774422391
LEKAKRTLRH	10	Unmodified	_LEKAKRTLRH_					0	0	0			REV__ENST00000498657.1_1_11:29747911-29748109:+|nuORF	REV__ENST00000498657.1_1_11:29747911-29748109:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.39111328125	2	626.385845	1250.75714	1.3747	0.00086107	-0.85511	-0.00053563	0.51955	0.00032544	626.8868969487263	110.01	0.86485	110.13	109.81	110.68	0.12289					76	30	3	0	0	0	0.85694	1	11841	11841		21.96	1.9631	1	3484200	+		26215	27792	17660	17670	29895	29895					0.14178967573889167
LEKALLKP	8	Unmodified	_LEKALLKP_					0	0	0			REV__ENSG00000151474|ENST00000357447|FRMD4A	REV__ENSG00000151474|ENST00000357447|FRMD4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30169677734375	2	456.299853	910.585153	0.060695	2.7695E-05	2.8141	0.0012841	2.8748	0.0013118	456.3009104320022	48.176	2.3719	48.166	47.652	50.024	-0.0093269					99	60	3	0	0	0	0.87479	1	3957	3957		30.504	2.6214	1	293790	+		26216	20253	17661	17671	29896	29896					0.1262842283366581
LEKARKAQ	8	Unmodified	_LEKARKAQ_					0	0	0		nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A;nc|ENSG00000158528|Q9ULJ8|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A;ENSG00000158528|ENST00000433360|PPP1R9A	nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A	nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2873840332031	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.89494	1	11449	11449		37.159	0	1	24731000			26217	5485	17662	17672	29897	29897					0.0874858239999412
LEKASKQLRFA	11	Unmodified	_LEKASKQLRFA_					0	0	0		ENSG00000158169|ENST00000289081|FANCC;ENST00000464653.1_1_9:97876909-97888818:-|nuORF;ENST00000480712.5_1_9:97869762-97897630:-|nuORF;ENST00000477942.5_1_9:97871961-97897765:-|nuORF	ENSG00000158169|ENST00000289081|FANCC	ENSG00000158169|ENST00000289081|FANCC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	645.8845825195312	2	645.880062	1289.74557	1.6037	0.0010358	3.8348	0.0024768	5.4385	0.0035126	645.8824480849914	105.51	1.1194	105.67	105	106.12	0.15924					80	28	3	0	0	0	0.71921	1	11271	11271		25.126	1.6033	1	2558100			26218	5466	17663	17673	29898	29898					0.11228725759883673
LEKASKQLRFA	11	Unmodified	_LEKASKQLRFA_					0	0	0		ENSG00000158169|ENST00000289081|FANCC;ENST00000464653.1_1_9:97876909-97888818:-|nuORF;ENST00000480712.5_1_9:97869762-97897630:-|nuORF;ENST00000477942.5_1_9:97871961-97897765:-|nuORF	ENSG00000158169|ENST00000289081|FANCC	ENSG00000158169|ENST00000289081|FANCC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	645.8839721679688	2	645.880062	1289.74557	0.94467	0.00061014	4.4455	0.0028713	5.3902	0.0034814	645.8828437678978	105.63	1.0903	105.74	105.07	106.16	0.10765					79	27	3	0	0	0	0.70847	2	11287	11234;11287		27.047	5.0874	1	2734800			26219	5466	17663	17673	29899;29900	29900					0.11228725759883673
LEKAVERTTT	10	Unmodified	_LEKAVERTTT_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|27|3|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|27|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3197631835938	2	574.319502	1146.62445	1.0954	0.0006291	-1.1095	-0.00063718	-0.01407	-8.0805E-06	574.3187099892803	94.307	4.5457	94.353	93.159	97.704	0.046173					261	107	4	0	0	0	0.86106	1	9897	9897		33.922	1.1092	1	1593500	+		26220	29449	17664	17674	29901	29901					0.05700478326571101
LEKAVERTTT	10	Unmodified	_LEKAVERTTT_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|27|3|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|27|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3197021484375	2	574.319502	1146.62445	0.59155	0.00033974	-0.58489	-0.00033592	0.0066607	3.8253E-06	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.76096	1	9571	9571		41.427	3.6151	1	1777600	+		26221	29449	17664	17674	29902	29902					0.05700478326571101
LEKAVSWW	8	Unmodified	_LEKAVSWW_					0	0	0			REV__ENST00000397226.2_2_2:37423743-37424447:+|nuORF	REV__ENST00000397226.2_2_2:37423743-37424447:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2403564453125	2	509.77146	1017.52837	0.11537	5.8813E-05	-2.2874	-0.0011661	-2.172	-0.0011072	509.7719102366114	38.409	0.2063	38.931	38.83	39.036	0.52235					6	4	2	0	0	0	0.4196	1	3171	3171		30.504	14.03	1	25944	+		26222	26161	17665	17675	29903	29903					0.020303752771383188
LEKAYAKLLG	10	Unmodified	_LEKAYAKLLG_					0	0	0		nc|ENSG00000162949|Q6MZZ7-2|CAPN13;ENSG00000077274|ENST00000324068|CAPN6;ENSG00000162949|ENST00000295055|CAPN13	nc|ENSG00000162949|Q6MZZ7-2|CAPN13	nc|ENSG00000162949|Q6MZZ7-2|CAPN13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.3323974609375	2	553.334424	1104.6543	0.81959	0.00045351	-4.4582	-0.0024669	-3.6386	-0.0020134	553.3317918445606	96.793	1.7474	96.956	96.403	98.15	0.16317					118	40	4	0	0	0	0.86348	1	10011	10011		31.53	1.2121	1	2701500			26223	1378	17666	17676	29904	29904					0.10615462062560255
LEKCIISIL	9	Unmodified	_LEKCIISIL_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3130493164062	2	516.312103	1030.60965	-0.25527	-0.0001318	4.18	0.0021582	3.9248	0.0020264	516.3141964907301	102.01	1.1313	102.2	101.89	103.02	0.19484					90	27	4	0	0	0	0.76764	1	10792	10792		34.173	3.6689	1	1199700	+		26224	29551	17667	17677	29905	29905					0.09557314924904858
LEKEKQAR	8	Unmodified	_LEKEKQAR_					0	0	0			REV__nc|ENSG00000007923|Q9NVH1-2|DNAJC11	REV__nc|ENSG00000007923|Q9NVH1-2|DNAJC11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.28961181640625	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.9283	1	10533	10533		49.442	0	1	9038000	+		26225	16126	17668	17678	29906	29906					0.06628261191804086
LEKELVTL	8	Unmodified	_LEKELVTL_					0	0	0		ENSG00000181544|ENST00000650831|FANCB	ENSG00000181544|ENST00000650831|FANCB	ENSG00000181544|ENST00000650831|FANCB	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.787841796875	2	472.786776	943.558998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.89	1	114.87	114.37	115.37	-0.02433								0	0	0	0.30045	1	12733	12733		40.573	0	1				26226	7392	17669	17679	29907	29907					0.08496108871543129
LEKFLSTVQL	10	Unmodified	_LEKFLSTVQL_					0	0	0			REV__nc|ENSG00000123240|Q96CV9-3|OPTN	REV__nc|ENSG00000123240|Q96CV9-3|OPTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3419799804688	2	589.344989	1176.67542	-0.36759	-0.00021664	-3.0824	-0.0018166	-3.45	-0.0020332	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.86698	1	9382	9382		28.081	1.3886	1	11103000	+		26227	18532	17670	17680	29908	29908					0.09415427371436635
LEKFLSTVQL	10	Unmodified	_LEKFLSTVQL_					0	0	0			REV__nc|ENSG00000123240|Q96CV9-3|OPTN	REV__nc|ENSG00000123240|Q96CV9-3|OPTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3436279296875	2	589.344989	1176.67542	-0.6745	-0.00039751	-2.9294	-0.0017264	-3.6039	-0.002124	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.86698	1	10181	10181		28.081	1.2854	1	16185000	+		26228	18532	17670	17680	29909	29909					0.09415427371436635
LEKFSITRI	9	Unmodified	_LEKFSITRI_					0	0	0			REV__ENST00000484913.5_1_7:92116773-92148321:-|nuORF	REV__ENST00000484913.5_1_7:92116773-92148321:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8297729492188	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.7932	1	8654	8654		25.574	1.0549	1	1844500	+		26229	27519	17671	17681	29910	29910					0.10094577919812764
LEKFSITRI	9	Unmodified	_LEKFSITRI_					0	0	0			REV__ENST00000484913.5_1_7:92116773-92148321:-|nuORF	REV__ENST00000484913.5_1_7:92116773-92148321:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.831298828125	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.76255	1	10644	10644		35.618	6.4687	1	5381700	+		26230	27519	17671	17681	29911	29911					0.10094577919812764
LEKFSITRI	9	Unmodified	_LEKFSITRI_					0	0	0			REV__ENST00000484913.5_1_7:92116773-92148321:-|nuORF	REV__ENST00000484913.5_1_7:92116773-92148321:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8304443359375	2	553.832049	1105.64954	-1.2274	-0.00067979	-2.3284	-0.0012895	-3.5558	-0.0019693	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.76255	2	10506	10506;10518		35.618	0	1	1825600	+		26231	27519	17671	17681	29912;29913	29912					0.10094577919812764
LEKGAAKRF	9	Unmodified	_LEKGAAKRF_					0	0	0			REV__ENSG00000137876|ENST00000260443|RSL24D1	REV__ENSG00000137876|ENST00000260443|RSL24D1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.24652099609375	2	510.303458	1018.59236	0.69677	0.00035557	3.2115	0.0016388	3.9082	0.0019944	510.3051642578911	83.147	0.86868	83.603	83.195	84.064	0.45555					27	20	2	0	0	0	0.20789	1	9678	9678		19.104	0	1	238210	+		26232	19421	17672	17682	29914	29914					0.08381155434096854
LEKGQRPRLP	10	Unmodified	_LEKGQRPRLP_					0	0	0			REV__ENST00000510769.5_2_3:130745736-130748474:+|nuORF	REV__ENST00000510769.5_2_3:130745736-130748474:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.3583984375	2	597.359296	1192.70404	-0.56757	-0.00033904	-1.0155	-0.00060663	-1.5831	-0.00094568	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.8608	1	10658	10658		34.173	3.8548	1	3951300	+		26233	27961	17673	17683	29915	29915					0.11539589791209437
LEKGQRPRLP	10	Unmodified	_LEKGQRPRLP_					0	0	0			REV__ENST00000510769.5_2_3:130745736-130748474:+|nuORF	REV__ENST00000510769.5_2_3:130745736-130748474:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.358642578125	2	597.359296	1192.70404	0.89294	0.00053341	-2.814	-0.001681	-1.921	-0.0011475	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.86348	1	10448	10448		31.53	1.2121	1	2674200	+		26234	27961	17673	17683	29916	29916					0.11539589791209437
LEKHKIKKSTK	11	Unmodified	_LEKHKIKKSTK_					0	0	0		ENSG00000128731|ENST00000261609|HERC2;ENST00000437318.5_1_15:20588586-20648641:-|nuORF;ENST00000528584.5_1_15:28900509-28916776:+|nuORF;ENST00000530420.5_1_15:28900570-28916776:+|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;nc|ENSG00000290376|Q9BVR0|HERC2P3;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF	ENSG00000128731|ENST00000261609|HERC2;ENST00000529624.5_3_15:28877823-28916776:+|nuORF	ENSG00000128731|ENST00000261609|HERC2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.2730712890625	3	447.285516	1338.83472	-1.7852	-0.0007985	-1.7875	-0.00079953	-3.5727	-0.001598	447.28469219012874	106.96	0.1251	107.02	106.91	107.04	0.053757					4	2	2	0	0	0	0.17301	1	11396	11396		29.245	21.566	1	84022			26235	3560;13330	17674	17684	29917	29917					0.17885560719400928
LEKHRLVSRT	10	Unmodified	_LEKHRLVSRT_					0	0	0		ENST00000461159.6_1_7:18330122-18868840:+|nuORF;nc|ENSG00000048052|Q9UKV0-4|HDAC9;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;ENSG00000048052|ENST00000686413|HDAC9	ENST00000461159.6_1_7:18330122-18868840:+|nuORF	ENST00000461159.6_1_7:18330122-18868840:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8704223632812	2	619.870028	1237.7255	-0.18236	-0.00011304	-0.59862	-0.00037106	-0.78097	-0.0004841	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.86272	1	9788	9788		24.519	0	1	2627900			26236	971	17675	17685	29918	29918					0.11614974819940471
LEKIKAKYCTV	11	Unmodified	_LEKIKAKYCTV_					0	0	0			REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3933715820312	2	648.373223	1294.73189	0.94448	0.00061238	-1.5302	-0.00099212	-0.58569	-0.00037974	648.3718730377361	107.19	0.18913	107.28	107.19	107.38	0.091263					8	4	3	0	0	0	0.17424	1	11501	11501		45.022	15.852	1	375350	+		26237	19448	17676	17686	29919	29919					0.09631731936428878
LEKILTLLKH	10	Unmodified	_LEKILTLLKH_					0	0	0			REV__nc|ENSG00000116062|P52701-4|MSH6	REV__nc|ENSG00000116062|P52701-4|MSH6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3660888671875	2	604.392273	1206.76999	3.2049	0.001937	-0.31497	-0.00019036	2.8899	0.0017466	604.3915561000745	105.25	0.47429	105.21	104.93	105.41	-0.04039					23	10	3	0	0	0	0.37624	1	11594	11594		24.519	0.99649	1	146020	+		26238	18176	17677	17687	29920	29920					0.1748798591340801
LEKKEKKKKK	10	Unmodified	_LEKKEKKKKK_					0	0	0		ENSG00000273559|ENST00000614790|CWC25	ENSG00000273559|ENST00000614790|CWC25	ENSG00000273559|ENST00000614790|CWC25	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4055786132812	2	643.929554	1285.84456	-0.021658	-1.3946E-05	-4.4397	-0.0028588	-4.4613	-0.0028728	643.926610316027	106	0.11767	105.97	105.9	106.01	-0.025146					4	2	2	0	0	0	0.37624	1	11489	11489		20.947	0	1	30226			26239	8987	17678	17688	29921	29921					0.21306748724782665
LEKKGVLGHLK	11	Unmodified	_LEKKGVLGHLK_					0	0	0		nc|ENSG00000133393|Q96NB1-2|CEP20;ENSG00000133393|ENST00000255759|CEP20	nc|ENSG00000133393|Q96NB1-2|CEP20	nc|ENSG00000133393|Q96NB1-2|CEP20	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3557739257812	2	611.387522	1220.76049	0.20651	0.00012626	1.4734	0.0009008	1.6799	0.0010271	611.3875781661195	95.822	0.25779	95.869	95.663	95.921	0.046989					6	5	2	0	0	0	0.17382	1	10132	10132		21.686	1.689	1	63281			26240	3875	17679	17689	29922	29922					0.15894217627896978
LEKKHRNLGL	10	Unmodified	_LEKKHRNLGL_					0	0	0		ENSG00000168159|ENST00000305943|RNF187	ENSG00000168159|ENST00000305943|RNF187	ENSG00000168159|ENST00000305943|RNF187	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.365966796875	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.8545	1	11323	11323		36.447	0	1	64334000			26241	6380	17680	17690	29923	29923					0.12459876308275852
LEKKKLMA	8	Unmodified	_LEKKKLMA_					0	0	0		ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.8013610839844	2	480.799163	959.583773	2.0445	0.00098299	1.3323	0.00064055	3.3768	0.0016235	480.7997098356697	95.287	4.3541	95.23	94.639	98.993	-0.057526					326	101	5	0	0	0	0.86791	3	10567	10174;10370;10567		40.573	3.4135	1	19210000			26242	4002	17681	17691	29924;29925;29926	29926					0.10236465473246881
LEKKKLMA	8	Unmodified	_LEKKKLMA_					0	0	0		ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.80072021484375	2	480.799163	959.583773	-0.54823	-0.00026359	3.9246	0.001887	3.3764	0.0016234	480.80093903656257	95.17	4.1898	95.217	94.619	98.809	0.046982					308	97	5	0	0	0	0.86791	2	10454	10048;10454		40.573	5.2118	1	18729000			26243	4002	17681	17691	29927;29928	29928					0.10236465473246881
LEKKKLMA	8	Unmodified	_LEKKKLMA_					0	0	0		ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8011474609375	2	480.799163	959.583773	0.73477	0.00035328	2.7032	0.0012997	3.438	0.001653	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.84341	1	9903	9903		24.203	2.2429	1	18148000			26244	4002	17681	17691	29929	29929					0.10236465473246881
LEKKKLMA	8	Unmodified	_LEKKKLMA_					0	0	0		ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.8011169433594	2	480.799163	959.583773	-0.2736	-0.00013155	4.2609	0.0020487	3.9873	0.0019171	480.80110367170755	95.033	3.9341	95.453	94.933	98.867	0.41964					263	95	5	0	0	0	0.86791	1	11486	11486		28.254	1.4582	1	9403500			26245	4002	17681	17691	29930	29930					0.10236465473246881
LEKKKQIYG	9	Unmodified	_LEKKKQIYG_					0	0	0			REV__ENSG00000139687|ENST00000267163|RB1	REV__ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8300170898438	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.76764	2	9227	9227;9346		34.173	1.3601	1	5219600	+		26246	19561	17682	17692	29931;29932	29931					0.10094577919812764
LEKKKQIYG	9	Unmodified	_LEKKKQIYG_					0	0	0			REV__ENSG00000139687|ENST00000267163|RB1	REV__ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8300170898438	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.76764	1	8690	8690		34.173	6.2903	1	1844500	+		26247	19561	17682	17692	29933	29933					0.10094577919812764
LEKKKQIYG	9	Unmodified	_LEKKKQIYG_					0	0	0			REV__ENSG00000139687|ENST00000267163|RB1	REV__ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.830078125	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.78536	1	9087	9087		29.15	3.5755	1	6029400	+		26248	19561	17682	17692	29934	29934					0.10094577919812764
LEKKKQIYG	9	Unmodified	_LEKKKQIYG_					0	0	0			REV__ENSG00000139687|ENST00000267163|RB1	REV__ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.82958984375	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.76764	1	8741	8741		34.173	0	1	1728300	+		26249	19561	17682	17692	29935	29935					0.10094577919812764
LEKKKQIYG	9	Unmodified	_LEKKKQIYG_					0	0	0			REV__ENSG00000139687|ENST00000267163|RB1	REV__ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.829833984375	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.44421	1	10837	10837		54.776	8.8041	1	5381700	+		26250	19561	17682	17692	29936	29936					0.10094577919812764
LEKKKSNSNIH	11	Unmodified	_LEKKKSNSNIH_					0	0	0		ENSG00000134901|ENST00000376004|POGLUT2;ENST00000460338.5_1_13:103443606-103451020:-|nuORF;ENST00000512118.1_1_5:127445889-127446054:+|nuORF	ENSG00000134901|ENST00000376004|POGLUT2	ENSG00000134901|ENST00000376004|POGLUT2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	649.364990234375	2	649.364776	1296.715	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.049	1	66.601	66.101	67.101	0.5526								0	0	0	0.56276	1	7214	7214		26.063	5.2262	1				26251	3969	17683	17693	29937	29937					0.07850947374868156
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3433837890625	2	589.342978	1176.6714	-0.40075	-0.00023618	0.34134	0.00020116	-0.059414	-3.5015E-05	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.638	2	9231	9061;9231		40.058	6.1365	1	4112500	+		26252	22907	17684	17694	29938;29939	29939					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.343505859375	2	589.342978	1176.6714	-0.36759	-0.00021664	0.33052	0.00019479	-0.037071	-2.1847E-05	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.68532	2	9642	9487;9642		33.922	5.8401	1	11103000	+		26253	22907	17684	17694	29940;29941	29941					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3424682617188	2	589.342978	1176.6714	-0.67475	-0.00039766	0.32554	0.00019186	-0.34921	-0.0002058	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.69931	2	9461	9461;9579		31.634	1.1306	1	5429300	+		26254	22907	17684	17694	29942;29943	29942					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3428344726562	2	589.342978	1176.6714	-0.6745	-0.00039751	0.48348	0.00028493	-0.19103	-0.00011258	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.66009	2	9915	9915;9953		37.508	5.9784	1	16185000	+		26255	22907	17684	17694	29944;29945	29944					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3432006835938	2	589.342978	1176.6714	2.2135	0.0013045	-2.6544	-0.0015644	-0.44092	-0.00025985	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.638	2	9677	9677;9773		40.058	2.4328	1	5579200	+		26256	22907	17684	17694	29946;29947	29946					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.34228515625	2	589.342978	1176.6714	2.472	0.0014569	-2.6554	-0.001565	-0.18344	-0.00010811	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.66009	2	9907	9907;10132		37.508	4.7576	1	16740000	+		26257	22907	17684	17694	29948;29949	29948					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3422241210938	2	589.342978	1176.6714	-0.65315	-0.00038493	0.25103	0.00014794	-0.40212	-0.00023699	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.70584	1	9721	9721		30.569	4.9948	1	5584100	+		26258	22907	17684	17694	29950	29950					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3427124023438	2	589.342978	1176.6714	-0.65438	-0.00038565	0.52453	0.00030913	-0.12985	-7.6528E-05	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.66009	2	9958	9958;9970		37.508	9.6259	1	16804000	+		26259	22907	17684	17694	29951;29952	29951					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3426513671875	2	589.342978	1176.6714	0.80964	0.00047716	-1.1939	-0.00070362	-0.38426	-0.00022646	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.67041	5	9251	9191;9251;9263;9286;9419		36.318	2.4328	1	6634500	+		26260	22907	17684	17694	29953;29954;29955;29956;29957	29954					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.343017578125	2	589.342978	1176.6714	0.81285	0.00047905	-1.2472	-0.00073503	-0.43435	-0.00025598	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.6493	2	9249	9249;9368		38.754	1.3988	1	6450100	+		26261	22907	17684	17694	29958;29959	29958					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3428344726562	2	589.342978	1176.6714	0.83312	0.00049099	-0.98017	-0.00057766	-0.14705	-8.6662E-05	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.72106	3	9703	9583;9595;9703		28.081	3.5623	1	20363000	+		26262	22907	17684	17694	29960;29961;29962	29962					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.342529296875	2	589.342978	1176.6714	-1.324	-0.00078029	0.94408	0.00055638	-0.37993	-0.00022391	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.53361	5	9267	9113;9183;9231;9267;9279		49.536	13.089	1	5946500	+		26263	22907	17684	17694	29963;29964;29965;29966;29967	29966					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.343017578125	2	589.342978	1176.6714	-1.324	-0.0007803	1.1649	0.00068655	-0.15907	-9.3746E-05	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.69248	2	9759	9578;9759		32.751	2.4328	1	17904000	+		26264	22907	17684	17694	29968;29969	29969					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3426513671875	2	589.342978	1176.6714	0.66189	0.00039008	-0.59085	-0.00034821	0.071046	4.1871E-05	589.3425006699924	91.235	1.3572	91.685	90.611	91.968	0.44958					101	32	4	0	0	0	0.62614	1	10790	10790		41.427	6.2746	1	1778100	+		26265	22907	17684	17694	29970	29970					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3428955078125	2	589.342978	1176.6714	0.71715	0.00042265	-0.34504	-0.00020335	0.37211	0.0002193	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.6493	1	10994	10994		38.754	5.9412	1	2439600	+		26266	22907	17684	17694	29971	29971					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.342529296875	2	589.342978	1176.6714	0.82336	0.00048524	-0.86988	-0.00051266	-0.046516	-2.7414E-05	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.72106	1	11219	11219		28.081	0.19925	1	9460500	+		26267	22907	17684	17694	29972	29972					0.09013337877718186
LEKKKSSSIAS	11	Unmodified	_LEKKKSSSIAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3421630859375	2	589.342978	1176.6714	0.15554	9.1664E-05	-0.12689	-7.4782E-05	0.028646	1.6882E-05	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.69248	3	11256	11199;11256;11407		32.751	2.4328	1	10540000	+		26268	22907	17684	17694	29973;29974;29975	29974					0.09013337877718186
LEKKLCMA	8	Unmodified	_LEKKLCMA_					0	0	0		CON__Q3MHN5;CON__ENSEMBL:ENSBTAP00000018229	CON__Q3MHN5	CON__Q3MHN5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.25567626953125	2	468.256274	934.497995	-0.11516	-5.3922E-05	-3.0327	-0.0014201	-3.1479	-0.001474	468.25473552954975	82.299	3.2758	82.365	81.1	84.376	0.06591					140	75	2	0	0	0	0.88915	1	8229	8229		35.201	1.6851	1	190410		+	26269	565	17685	17695	29976	29976					0.0281255729609029
LEKKLKTQFF	10	Unmodified	_LEKKLKTQFF_					0	0	0			REV__nc|ENSG00000174844|Q6ZR08|DNAH12;REV__ENSG00000174844|ENST00000495027|DNAH12	REV__nc|ENSG00000174844|Q6ZR08|DNAH12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.3843994140625	2	641.381906	1280.74926	1.6527	0.00106	2.4781	0.0015894	4.1308	0.0026494	641.383219573957	102.66	1.2178	102.7	102.3	103.51	0.043198					82	29	4	0	0	0	0.86348	1	11091	11091		31.53	0.96095	1	1834000	+		26270	30045;22019	17686	17696	29977	29977					0.12011395533750147
LEKKNEQSN	9	Unmodified	_LEKKNEQSN_					0	0	0		ENST00000497960.5_1_22:45567785-45567908:+|nuORF	ENST00000497960.5_1_22:45567785-45567908:+|nuORF	ENST00000497960.5_1_22:45567785-45567908:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3168334960938	2	545.280377	1088.5462	-1.4676	-0.00080023	-2.0315	-0.0011077	-3.499	-0.0019079	545.2796708335429	90.355	0.29349	90.531	90.3	90.594	0.1758					9	6	2	0	0	0	0.20789	1	8985	8985		51.193	17.02	1	70297			26271	12816	17687	17697	29978	29978					0.0054704574135939765
LEKKNLGR	8	Unmodified	_LEKKNLGR_					0	0	0		ENST00000334268.8_1_6:123658775-123687324:-|nuORF	ENST00000334268.8_1_6:123658775-123687324:-|nuORF	ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774353027344	2	479.295633	956.576714	-1.5594	-0.00074739	-2.668	-0.0012788	-4.2274	-0.0020262	479.2932053752452	84.408	0.65173	84.558	84.32	84.972	0.14952					21	14	2	0	0	0	0.4196	1	8205	8205		14.137	0	1	67371			26272	10147	17688	17698	29979	29979					0.09668868917037798
LEKKPAIL	8	Unmodified	_LEKKPAIL_					0	0	0			REV__nc|ENSG00000117360|O43395-3|PRPF3	REV__nc|ENSG00000117360|O43395-3|PRPF3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2633972167969	2	456.299853	910.585153	0.63727	0.00029078	-1.2714	-0.00058012	-0.6341	-0.00028934	456.2984030986181	84.702	0.17421	84.761	84.632	84.806	0.059258					5	3	2	0	0	0	0.4196	1	8552	8552		27.882	4.8398	1	22065	+		26273	18258	17689	17699	29980	29980					0.1262842283365444
LEKKTPAAM	9	Unmodified	_LEKKTPAAM_					0	0	0			REV__ENSG00000178605|ENST00000326153|GTPBP6	REV__ENSG00000178605|ENST00000326153|GTPBP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7800598144531	2	494.778428	987.542302	-0.074951	-3.7084E-05	4.0919	0.0020246	4.017	0.0019875	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.69624	1	8700	8700		40.778	7.2626	1	651380	+		26274	22287	17690	17700	29981	29981					0.04803284713909761
LEKKTPAAM	9	Unmodified	_LEKKTPAAM_					0	0	0			REV__ENSG00000178605|ENST00000326153|GTPBP6	REV__ENSG00000178605|ENST00000326153|GTPBP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.78009033203125	2	494.778428	987.542302	1.0619	0.0005254	2.8604	0.0014153	3.9223	0.0019407	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.78058	1	8874	8874		30.504	2.6214	1	657500	+		26275	22287	17690	17700	29982	29982					0.04803284713909761
LEKKTPAAM	9	Unmodified	_LEKKTPAAM_					0	0	0			REV__ENSG00000178605|ENST00000326153|GTPBP6	REV__ENSG00000178605|ENST00000326153|GTPBP6	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.78021240234375	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.067	1	87.216	86.716	87.716	0.14956								0	0	0	0.32039	1	8590	8590		44.117	1.7207	1		+		26276	22287	17690	17700	29983	29983					0.04803284713909761
LEKKTRRQY	9	Unmodified	_LEKKTRRQY_					0	0	0			REV__nc|ENSG00000231991|A6NMY6|ANXA2P2	REV__nc|ENSG00000231991|A6NMY6|ANXA2P2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3551025390625	2	611.356754	1220.69895	-0.40517	-0.00024771	-0.92075	-0.00056291	-1.3259	-0.00081061	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.77244	1	9825	9825		32.812	0	1	5373200	+		26277	22544	17691	17701	29984	29984					0.09743285928607293
LEKKTRRQY	9	Unmodified	_LEKKTRRQY_					0	0	0			REV__nc|ENSG00000231991|A6NMY6|ANXA2P2	REV__nc|ENSG00000231991|A6NMY6|ANXA2P2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3543090820312	2	611.356754	1220.69895	1.1383	0.00069592	-2.4619	-0.0015051	-1.3236	-0.0008092	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.69624	1	9539	9539		40.778	2.9666	1	7316900	+		26278	22544	17691	17701	29985	29985					0.09743285928607293
LEKKTRRQY	9	Unmodified	_LEKKTRRQY_					0	0	0			REV__nc|ENSG00000231991|A6NMY6|ANXA2P2	REV__nc|ENSG00000231991|A6NMY6|ANXA2P2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3557739257812	2	611.356754	1220.69895	0.85002	0.00051967	-2.1096	-0.0012897	-1.2596	-0.00077008	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.76255	1	9577	9577		35.618	5.3006	1	6836400	+		26279	22544	17691	17701	29986	29986					0.09743285928607293
LEKKVSVAVPK	11	Unmodified	_LEKKVSVAVPK_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.3797607421875	2	599.381906	1196.74926	-0.35766	-0.00021438	-2.6712	-0.0016011	-3.0289	-0.0018155	599.3801693786043	103.37	3.7428	103.41	103.03	106.77	0.041481					250	89	5	0	0	0	0.66929	2	11197	11197;11233		36.447	2.2742	1	13277000			26280	5333	17692	17702	29987;29988	29987					0.15875395533748815
LEKKVSVAVPK	11	Unmodified	_LEKKVSVAVPK_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3792724609375	2	599.381906	1196.74926	0.97491	0.00058434	-4.0729	-0.0024412	-3.098	-0.0018569	599.3792959797308	103.23	2.9032	103.41	102.97	105.87	0.18297					219	73	5	0	0	0	0.67778	2	11018	10981;11018		35.152	4.6484	1	22539000			26281	5333	17692	17702	29989;29990	29990					0.15875395533748815
LEKKVSVAVPK	11	Unmodified	_LEKKVSVAVPK_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3795776367188	2	599.381906	1196.74926	-1.2913	-0.00077396	-1.7358	-0.0010404	-3.0271	-0.0018144	599.3806932084216	103.36	2.8938	103.47	103.07	105.96	0.11494					245	72	6	0	0	0	0.66929	3	10937	10853;10937;10984		36.447	2.5251	1	20299000			26282	5333	17692	17702	29991;29992;29993	29992					0.15875395533748815
LEKKVVKMA	9	Unmodified	_LEKKVVKMA_					0	0	0			REV__ENSG00000163558|ENST00000295797|PRKCI	REV__ENSG00000163558|ENST00000295797|PRKCI	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303466796875	2	523.325545	1044.63654	-0.0413	-2.1613E-05	-0.95619	-0.0005004	-0.99749	-0.00052201	523.3249042464597	89.44	0.38972	89.509	89.342	89.731	0.068703					11	8	2	0	0	0	0.20789	1	9129	9129		39.253	10.103	1	51676	+		26283	20934	17693	17703	29994	29994					0.11600423536083326
LEKKVVKMA	9	Unmodified	_LEKKVVKMA_					0	0	0			REV__ENSG00000163558|ENST00000295797|PRKCI	REV__ENSG00000163558|ENST00000295797|PRKCI	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3035278320312	2	523.325545	1044.63654	1.6885	0.00088362	0.55093	0.00028832	2.2394	0.0011719	523.3252743387656	89.043	0.21036	88.971	88.795	89.005	-0.07238					6	4	2	0	0	0	0.20789	1	9280	9280		42.396	26.389	1	98289	+		26284	20934	17693	17703	29995	29995					0.11600423536083326
LEKKVVKMA	9	Unmodified	_LEKKVVKMA_					0	0	0			REV__ENSG00000163558|ENST00000295797|PRKCI	REV__ENSG00000163558|ENST00000295797|PRKCI	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.325545	1044.63654	1.1284	0.00059052	-1.9599	-0.0010257	-0.83148	-0.00043514	523.3245035283726	88.057	0.32752	88.11	87.991	88.319	0.053024					13	7	2	0	0	0	0.20789	1	9061	9061		26.693	8.3685	1	42304	+		26285	20934	17693	17703	29996	29996					0.11600423536083326
LEKKVVKMA	9	Unmodified	_LEKKVVKMA_					0	0	0			REV__ENSG00000163558|ENST00000295797|PRKCI	REV__ENSG00000163558|ENST00000295797|PRKCI	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3034057617188	2	523.325545	1044.63654	0.72187	0.00037777	-1.2402	-0.00064902	-0.51832	-0.00027125	523.3249123509753	89.301	0.43005	89.453	89.182	89.612	0.15189					12	9	2	0	0	0	0.20789	1	8905	8905		27.882	6.1799	1	55076	+		26286	20934	17693	17703	29997	29997					0.11600423536083326
LEKKVVKMA	9	Unmodified	_LEKKVVKMA_					0	0	0			REV__ENSG00000163558|ENST00000295797|PRKCI	REV__ENSG00000163558|ENST00000295797|PRKCI	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035278320312	2	523.325545	1044.63654	-1.5391	-0.00080543	1.715	0.00089752	0.17597	9.2089E-05	523.3248679597596	88.548	0.24734	88.72	88.577	88.825	0.17233					6	5	2	0	0	0	0.20789	1	8751	8751		26.693	4.9906	1	43060	+		26287	20934	17693	17703	29998	29998					0.11600423536083326
LEKKVVKMA	9	Unmodified	_LEKKVVKMA_					0	0	0			REV__ENSG00000163558|ENST00000295797|PRKCI	REV__ENSG00000163558|ENST00000295797|PRKCI	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.30322265625	2	523.325545	1044.63654	1.1633	0.0006088	-4.3776	-0.0022909	-3.2143	-0.0016821	523.3232452894978	88.527	0.24614	88.976	88.873	89.119	0.44893					8	5	2	0	0	0	0.20789	1	10429	10429		21.96	15.647	1	94319	+		26288	20934	17693	17703	29999	29999					0.11600423536083326
LEKKVVKMA	9	Unmodified	_LEKKVVKMA_					0	0	0			REV__ENSG00000163558|ENST00000295797|PRKCI	REV__ENSG00000163558|ENST00000295797|PRKCI	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.303466796875	2	523.325545	1044.63654	-0.98004	-0.00051288	-1.0197	-0.00053363	-1.9997	-0.0010465	523.3253151716998	88.243	0.63549	88.706	88.312	88.948	0.46312					21	15	2	0	0	0	0.20789	1	10378	10378		39.253	33.332	1	78666	+		26289	20934	17693	17703	30000	30000					0.11600423536083326
LEKLALRDPRA	11	Unmodified	_LEKLALRDPRA_					0	0	0		ENST00000488463.5_1_1:40778452-40781106:-|nuORF	ENST00000488463.5_1_1:40778452-40781106:-|nuORF	ENST00000488463.5_1_1:40778452-40781106:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.3847045898438	2	641.385511	1280.75647	-1.1549	-0.00074073	-0.56975	-0.00036543	-1.7246	-0.0011062	641.3847498029768	102.62	1.032	102.75	102.41	103.44	0.13569					59	25	4	0	0	0	0.62614	1	10766	10766		41.427	6.2746	1	1426400			26290	12628	17694	17704	30001	30001					0.12732128134189225
LEKLEAAES	9	Unmodified	_LEKLEAAES_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18;nc|ENSG00000182095|O15417-4|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2613830566406	2	495.261122	988.507691	-1.7096	-0.00084669	-2.5715	-0.0012736	-4.2811	-0.0021203	495.25992726495855	40.741	2.1466	41.33	40.797	42.943	0.58915					138	58	4	0	0	0	0.76764	1	3472	3472		34.173	0	1	7011700			26291	7421	17695	17705	30002	30002					0.012977401068155814
LEKLFELSEA	10	Unmodified	_LEKLFELSEA_					0	0	0		ENST00000446228.5_1_2:162758621-162834241:+|nuORF;nc|ENSG00000144290|Q6U841-2|SLC4A10;nc|ENSG00000144290|Q6U841-3|SLC4A10;ENSG00000144290|ENST00000446997|SLC4A10	ENST00000446228.5_1_2:162758621-162834241:+|nuORF	ENST00000446228.5_1_2:162758621-162834241:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3429565429688	2	589.818804	1177.62306	0.83354	0.00049164	-2.3567	-0.00139	-1.5232	-0.00089839	589.8177207596877	94.504	0.21014	94.667	94.575	94.785	0.16308					5	4	2	0	0	0	0.37624	1	9655	9655		23.523	7.8809	1	47912			26292	4700	17696	17706	30003	30003					0.04134844237842117
LEKLFKMD	8	Unmodified	_LEKLFKMD_					0	0	0		nc|ENSG00000111261|Q9H8J5-2|MANSC1;ENSG00000111261|ENST00000535902|MANSC1	nc|ENSG00000111261|Q9H8J5-2|MANSC1	nc|ENSG00000111261|Q9H8J5-2|MANSC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2821044921875	2	512.280803	1022.54705	-0.88857	-0.0004552	1.958	0.0010031	1.0695	0.00054786	512.2817341917631	86.454	3.0125	86.454	85.618	88.63	0					129	69	2	0	0	0	0.86677	1	8326	8326		27.882	1.0861	1	265310			26293	2565	17697	17707	30004	30004					0.036681688566886805
LEKLFKMD	8	Unmodified	_LEKLFKMD_					0	0	0		nc|ENSG00000111261|Q9H8J5-2|MANSC1;ENSG00000111261|ENST00000535902|MANSC1	nc|ENSG00000111261|Q9H8J5-2|MANSC1	nc|ENSG00000111261|Q9H8J5-2|MANSC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2822875976562	2	512.280803	1022.54705	1.2711	0.00065114	-0.20223	-0.0001036	1.0688	0.00054754	512.2806294768477	86.671	3.241	86.597	85.234	88.475	-0.074005					135	75	2	0	0	0	0.89043	1	8900	8900		35.618	2.1027	1	387010			26294	2565	17697	17707	30005	30005					0.036681688566886805
LEKLFKMD	8	Unmodified	_LEKLFKMD_					0	0	0		nc|ENSG00000111261|Q9H8J5-2|MANSC1;ENSG00000111261|ENST00000535902|MANSC1	nc|ENSG00000111261|Q9H8J5-2|MANSC1	nc|ENSG00000111261|Q9H8J5-2|MANSC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2830810546875	2	512.280803	1022.54705	-0.3427	-0.00017556	1.3496	0.0006914	1.0069	0.00051584	512.2814243636773	86.125	3.8841	86.31	84.842	88.726	0.18523					170	91	2	0	0	0	0.889	2	8467	8443;8467		40.778	3.5178	1	381930			26295	2565	17697	17707	30006;30007	30007					0.036681688566886805
LEKLFNGSLL	10	Unmodified	_LEKLFNGSLL_					0	0	0			REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3299560546875	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.85981	2	9537	9537;9826		35.152	4.8343	1	15673000	+		26296	15561	17698	17708	30008;30009	30008					0.0881915819995811
LEKLIRAMERR	11	Unmodified	_LEKLIRAMERR_					0	0	0			REV__nc|ENSG00000183023|P32418-3|SLC8A1	REV__nc|ENSG00000183023|P32418-3|SLC8A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2836608886719	3	472.281889	1413.82384	0.77578	0.00036639	1.4482	0.00068398	2.224	0.0010504	472.2820799548474	101.83	1.6089	101.96	101.04	102.65	0.13523					79	39	4	0	0	0	0.77205	1	10664	10664		17.167	3.0807	1	311620	+		26297	22568	17699	17709	30010	30010					0.13347835073454917
LEKLISIQSF	10	Unmodified	_LEKLISIQSF_					0	0	0			REV__nc|ENSG00000105778|Q8NBF6-2|AVL9	REV__nc|ENSG00000105778|Q8NBF6-2|AVL9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3427734375	2	589.344989	1176.67542	0.15553	9.1664E-05	-3.5398	-0.0020862	-3.3842	-0.0019945	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.86621	1	11571	11571		26.063	0.48933	1	10540000	+		26298	17569	17700	17710	30011	30011					0.09415427371436635
LEKLKKVF	8	Unmodified	_LEKLKKVF_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	502.8139343261719	2	502.828778	1003.643	-0.46265	-0.00023263	-2.4626	-0.0012383	-2.9253	-0.0014709	502.8285031679629	97.133	0.82621	97.364	96.999	97.825	0.23103					22	19	2	0	0	0	0.4196	1	10000	10000		40.573	7.057	1	205620	+		26299	29671	17701	17711	30012	30012					0.14132684759090353
LEKLLLDS	8	Unmodified	_LEKLLLDS_					0	0	0			REV__ENSG00000101004|ENST00000278886|NINL	REV__ENSG00000101004|ENST00000278886|NINL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7776184082031	2	465.778951	929.543348	-0.25577	-0.00011913	-2.7145	-0.0012643	-2.9702	-0.0013835	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.884	1	7925	7925		33.516	0	1	451640	+		26300	17236	17702	17712	30013	30013					0.07575822354476713
LEKLLLFLNN	10	Unmodified	_LEKLLLFLNN_					0	0	0			REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2	REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2489318847656	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.867	1	15.784	15.284	16.284	-0.083363								0	0	0	0.45132	1	86	86		29.551	3.4874	1		+		26301	30147	17703	17713	30014	30014					0.12347706642435696
LEKLLLLN	8	Unmodified	_LEKLLLLN_					0	0	0		ENST00000482151.1_2:149856814-149868187:+|nuORF;nc|ENSG00000168280|O60282-2|KIF5C;ENSG00000168280|ENST00000435030|KIF5C	ENST00000482151.1_2:149856814-149868187:+|nuORF	ENST00000482151.1_2:149856814-149868187:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97479248046875	2	478.312961	954.611368	0.32855	0.00015715	1.4804	0.00070809	1.8089	0.00086524	478.3136520443861	50.597	0.26449	50.647	50.409	50.674	0.0499					10	9	2	0	0	0	0.4196	1	3979	3979		13.775	0	1	31901			26302	6388	17704	17714	30015	30015					0.13224692005144334
LEKLLVHKYGL	11	Unmodified	_LEKLLVHKYGL_					0	0	0		nc|ENSG00000138835|P49796-9|RGS3;nc|ENSG00000138835|P49796-4|RGS3;ENSG00000138835|ENST00000695401|RGS3;nc|ENSG00000138835|P49796-6|RGS3;nc|ENSG00000138835|P49796|RGS3;nc|ENSG00000138835|P49796-2|RGS3;nc|ENSG00000138835|P49796-7|RGS3;nc|ENSG00000138835|P49796-8|RGS3;nc|ENSG00000138835|P49796-1|RGS3	nc|ENSG00000138835|P49796-9|RGS3	nc|ENSG00000138835|P49796-9|RGS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2729797363281	3	438.271096	1311.79146	2.7278	0.0011955	1.5423	0.00067595	4.2701	0.0018715	438.27166879991887	107.29	1.1275	107.26	106.75	107.88	-0.034134					106	26	5	0	0	0	0.72374	1	11895	11895		27.644	4.266	1	5019700			26303	4341	17705	17715	30016	30016					0.1480337094214974
LEKLLVHKYGL	11	Unmodified	_LEKLLVHKYGL_					0	0	0		nc|ENSG00000138835|P49796-9|RGS3;nc|ENSG00000138835|P49796-4|RGS3;ENSG00000138835|ENST00000695401|RGS3;nc|ENSG00000138835|P49796-6|RGS3;nc|ENSG00000138835|P49796|RGS3;nc|ENSG00000138835|P49796-2|RGS3;nc|ENSG00000138835|P49796-7|RGS3;nc|ENSG00000138835|P49796-8|RGS3;nc|ENSG00000138835|P49796-1|RGS3	nc|ENSG00000138835|P49796-9|RGS3	nc|ENSG00000138835|P49796-9|RGS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.27313232421875	3	438.271096	1311.79146	0.73903	0.00032389	3.6074	0.001581	4.3464	0.0019049	438.27258626082147	106.07	0.86208	106.16	105.83	106.7	0.099007					90	20	5	0	0	0	0.72374	1	11324	11324		27.644	0.89421	1	9065500			26304	4341	17705	17715	30017	30017					0.1480337094214974
LEKLNKMKVF	10	Oxidation (M)	_LEKLNKM(Oxidation (M))KVF_		LEKLNKM(1)KVF		LEKLNKM(41)KVF	0	0	1			REV__ENST00000495037.1_1_3:66430689-66454678:-|nuORF	REV__ENST00000495037.1_1_3:66430689-66454678:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3677978515625	2	633.367941	1264.72133	0.88639	0.00056141	0.91116	0.0005771	1.7976	0.0011385	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.77314	1	9925	9925		40.778	7.9657	1	5166300	+		26305	19911	17706	17716	30018	30018		294			0.09955749282016768
LEKLNKMKVF	10	Oxidation (M)	_LEKLNKM(Oxidation (M))KVF_		LEKLNKM(1)KVF		LEKLNKM(44)KVF	0	0	1			REV__ENST00000495037.1_1_3:66430689-66454678:-|nuORF	REV__ENST00000495037.1_1_3:66430689-66454678:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.36865234375	2	633.367941	1264.72133	2.3091	0.0014625	-0.43146	-0.00027328	1.8776	0.0011892	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.70553	1	11796	11796		44.377	9.2252	1	10333000	+		26306	19911	17706	17716	30019	30019		294			0.09955749282016768
LEKLNWVRLPP	11	Unmodified	_LEKLNWVRLPP_					0	0	0		ENSG00000104998|ENST00000263379|IL27RA	ENSG00000104998|ENST00000263379|IL27RA	ENSG00000104998|ENST00000263379|IL27RA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.60845947265625	3	455.606478	1363.79761	-0.20528	-9.3526E-05	4.4259	0.0020165	4.2206	0.0019229	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.60888	1	7462	7462		43.419	2.3385	1	1835000			26307	2179	17707	17717	30020	30020					0.13025889173673022
LEKLPAITPK	10	Unmodified	_LEKLPAITPK_					0	0	0		ENST00000469535.5_1_1:207941017-207941188:+|nuORF	ENST00000469535.5_1_1:207941017-207941188:+|nuORF	ENST00000469535.5_1_1:207941017-207941188:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.353271484375	2	555.350074	1108.6856	3.1602	0.001755	2.6303	0.0014608	5.7905	0.0032158	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.8651	1	10955	10955		25.574	2.5316	1	5616800			26308	12204	17708	17718	30021	30021					0.13560035096634238
LEKLPSISTC	10	Unmodified	_LEKLPSISTC_					0	0	0			REV__ENSG00000171243|ENST00000307068|SOSTDC1	REV__ENSG00000171243|ENST00000307068|SOSTDC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.316650390625	2	545.794275	1089.574	-0.34993	-0.00019099	4.0822	0.0022281	3.7323	0.0020371	545.7964420263643	92.656	2.7077	92.726	91.431	94.139	0.06987					102	63	2	0	0	0	0.37624	1	9636	9636		41.427	8.6142	1	125590	+		26309	21722	17709	17719	30022	30022					0.0327923267720962
LEKLRIMFAG	10	Unmodified	_LEKLRIMFAG_					0	0	0		nc|ENSG00000100479|P56282-2|POLE2;nc|ENSG00000100479|P56282-3|POLE2;ENSG00000100479|ENST00000216367|POLE2	nc|ENSG00000100479|P56282-2|POLE2	nc|ENSG00000100479|P56282-2|POLE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3431396484375	2	589.341726	1176.6689	0.82336	0.00048524	1.2532	0.00073856	2.0765	0.0012238	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.86348	1	11528	11528		31.53	4.4825	1	9460500			26310	1842	17710	17720	30023	30023					0.08763210939059718
LEKLRIMGAF	10	Unmodified	_LEKLRIMGAF_					0	0	0			REV__nc|ENSG00000198739|Q86VH5-2|LRRTM3	REV__nc|ENSG00000198739|Q86VH5-2|LRRTM3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3443603515625	2	589.341726	1176.6689	-0.3676	-0.00021664	2.4536	0.001446	2.086	0.0012294	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.86763	1	9727	9727		26.693	1.1189	1	11103000	+		26311	23370	17711	17721	30024	30024					0.08763210939059718
LEKLRKLAIAM	11	Unmodified	_LEKLRKLAIAM_					0	0	0			REV__ENST00000354485.5_1_9:676972-730286:+|nuORF	REV__ENST00000354485.5_1_9:676972-730286:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4049072265625	2	643.404858	1284.79516	2.6785	0.0017233	-1.0241	-0.00065892	1.6544	0.0010644	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.73893	1	11788	11788		24.519	0	1	14704000	+		26312	17644	17712	17722	30025	30025					0.16415717444328948
LEKLRKLAIAM	11	Unmodified	_LEKLRKLAIAM_					0	0	0			REV__ENST00000354485.5_1_9:676972-730286:+|nuORF	REV__ENST00000354485.5_1_9:676972-730286:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4037475585938	2	643.404858	1284.79516	1.777	0.0011433	1.6542	0.0010643	3.4312	0.0022076	643.4059831518348	106.95	1.1451	106.98	106.72	107.86	0.03688					79	26	4	0	0	0	0.6921	1	11826	11826		32.812	4.7309	1	1597700	+		26313	17644	17712	17722	30026	30026					0.16415717444328948
LEKLRKLAIAM	11	Unmodified	_LEKLRKLAIAM_					0	0	0			REV__ENST00000354485.5_1_9:676972-730286:+|nuORF	REV__ENST00000354485.5_1_9:676972-730286:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4059448242188	2	643.404858	1284.79516	1.6039	0.001032	0.24014	0.00015451	1.8441	0.0011865	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.7342	1	11383	11383		25.574	0	1	21138000	+		26314	17644	17712	17722	30027	30027					0.16415717444328948
LEKLRVARRP	10	Unmodified	_LEKLRVARRP_					0	0	0		nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-5|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A;ENST00000588791.1_1_17:27442450-27447678:-|nuORF	nc|ENSG00000196535|Q92614-3|MYO18A;ENST00000588791.1_1_17:27442450-27447678:-|nuORF	nc|ENSG00000196535|Q92614-3|MYO18A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2661437988281	3	413.266568	1236.77787	0.21308	8.806E-05	3.766	0.0015564	3.9791	0.0016444	413.2670936743631	41.866	2.062	41.835	40.73	42.792	-0.030991					122	53	4	0	0	0	0.85086	1	3045	3045		19.263	0.15916	1	252870			26315	8070;14219	17713	17723	30028	30028					0.1689555795353499
LEKLRVCSE	9	Unmodified	_LEKLRVCSE_					0	0	0			REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.7587280273438	2	538.792066	1075.56958	-1.5599	-0.00084047	-3.2696	-0.0017617	-4.8296	-0.0026021	538.7904336687234	42.921	0.33191	43.354	43.17	43.502	0.4334					11	7	2	0	0	0	0.20789	1	3849	3849		39.253	7.723	1	99953	+		26316	18112	17714	17724	30029	30029					0.03481768254300732
LEKLVVLLV	9	Unmodified	_LEKLVVLLV_					0	0	0			REV__ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|3|intron	REV__ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|3|intron	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3184204101562	2	513.352086	1024.68962	-0.61225	-0.0003143	-2.2865	-0.0011738	-2.8987	-0.0014881	513.3506979356338	55.946	1.1013	55.977	55.076	56.177	0.030838					35	27	2	0	0	0	0.20789	1	4978	4978		37.159	0	1	66711	+		26317	19563	17715	17725	30030	30030					0.17826124590374093
LEKMHLYLS	9	Unmodified	_LEKMHLYLS_					0	0	0		ENSG00000120318|ENST00000239440|ARAP3;nc|ENSG00000120318|Q8WWN8-2|ARAP3;ENST00000512390.1_1_5:141033519-141041645:-|nuORF	ENSG00000120318|ENST00000239440|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.32958984375	2	567.30481	1132.59507	1.8953	0.0010752	1.8212	0.0010332	3.7165	0.0021084	567.8082263645574	93.279	0.60738	93.217	92.847	93.454	-0.061432					21	14	2	0	0	0	0.20789	1	9910	9910		26.693	6.6961	1	53386			26318	3125	17716	17726	30031	30031					0.03407242776734165
LEKMHLYLS	9	Unmodified	_LEKMHLYLS_					0	0	0		ENSG00000120318|ENST00000239440|ARAP3;nc|ENSG00000120318|Q8WWN8-2|ARAP3;ENST00000512390.1_1_5:141033519-141041645:-|nuORF	ENSG00000120318|ENST00000239440|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.330078125	2	567.30481	1132.59507	1.493	0.00084698	-4.3817	-0.0024858	-2.8887	-0.0016388	567.3037852321057	92.246	0.42764	92.292	92.154	92.582	0.045448					16	9	2	0	0	0	0.20789	1	9623	9623		19.997	0	1	108540			26319	3125	17716	17726	30032	30032					0.03407242776734165
LEKNAGPE	8	Unmodified	_LEKNAGPE_					0	0	0		ENST00000471733.5_1_3:197023290-197025421:-|nuORF;ENST00000392382.6_1_3:197023293-197024961:-|nuORF;ENST00000392381.7_1_3:197023290-197024672:-|nuORF	ENST00000471733.5_1_3:197023290-197025421:-|nuORF	ENST00000471733.5_1_3:197023290-197025421:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	429.2355651855469	2	429.2218	856.429047	-0.17924	-7.6935E-05	2.8293	0.0012144	2.6501	0.0011375	429.2229203048634	63.233	0.11743	63.199	63.146	63.264	-0.033714					7	5	2	0	0	0	0.4196	1	5998	5998		37.812	0	1	81709			26320	11020	17717	17727	30033	30033					-0.004910674076086252
LEKNCKII	8	Unmodified	_LEKNCKII_					0	0	0		ENSG00000198075|ENST00000272452|SULT1C4	ENSG00000198075|ENST00000272452|SULT1C4	ENSG00000198075|ENST00000272452|SULT1C4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.8007507324219	2	480.78097	959.547388	-0.53559	-0.0002575	2.6185	0.0012589	2.0829	0.0010014	480.7820839341487	95.263	0.36509	95.31	95.047	95.412	0.046982					14	8	2	0	0	0	0.4196	1	10072	10072		29.15	4.9468	1	241690			26321	8233	17718	17728	30034	30034					0.06599588576546012
LEKNPPTT	8	Unmodified	_LEKNPPTT_					0	0	0			REV__nc|ENSG00000047849|P27816-3|MAP4;REV__nc|ENSG00000047849|P27816-6|MAP4	REV__nc|ENSG00000047849|P27816-6|MAP4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2743225097656	2	450.245275	898.475997	-0.14137	-6.3653E-05	1.0083	0.000454	0.86697	0.00039035	450.2454741045245	93.532	0.29694	93.602	93.54	93.837	0.069595					8	6	2	0	0	0	0.4196	1	9723	9723		58.782	25.97	1	70801	+		26322	29685;29684	17719	17729	30035	30035					0.022697921435110402
LEKNPPTT	8	Unmodified	_LEKNPPTT_					0	0	0			REV__nc|ENSG00000047849|P27816-3|MAP4;REV__nc|ENSG00000047849|P27816-6|MAP4	REV__nc|ENSG00000047849|P27816-6|MAP4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2744445800781	2	450.245275	898.475997	-1.2537	-0.00056445	-0.22744	-0.00010241	-1.4811	-0.00066686	450.24513556903315	92.818	1.034	93.044	92.577	93.611	0.22548					35	24	2	0	0	0	0.4196	1	9366	9366		40.778	22.454	1	181790	+		26323	29685;29684	17719	17729	30036	30036					0.022697921435110402
LEKNPSYTYYA	11	Unmodified	_LEKNPSYTYYA_					0	0	0		nc|ENSG00000116748|P23109-2|AMPD1;ENSG00000116748|ENST00000520113|AMPD1	nc|ENSG00000116748|P23109-2|AMPD1	nc|ENSG00000116748|P23109-2|AMPD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2742004394531	3	450.218837	1347.63468	-1.2537	-0.00056446	1.9455	0.00087588	0.69171	0.00031142	450.2203423091262	92.864	0.44415	93.089	92.832	93.276	0.22547					17	10	2	0	0	0	0.17648	1	9424	9424		26.75	8.2187	1	71230			26324	2944	17720	17730	30037	30037					-0.025229587388139407
LEKNSNARDS	10	Unmodified	_LEKNSNARDS_					0	0	0			REV__ENSG00000092529|ENST00000397163|CAPN3	REV__ENSG00000092529|ENST00000397163|CAPN3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3300170898438	2	567.280909	1132.54726	0.7885	0.0004473	-1.1541	-0.00065471	-0.36562	-0.00020741	567.2794898411152	91.976	0.25597	92.132	91.94	92.196	0.15614					7	5	2	0	0	0	0.37624	1	9283	9283		41.427	12.277	1	68669	+		26325	17035	17721	17731	30038	30038					-0.013707398897395251
LEKPDFINVC	10	Unmodified	_LEKPDFINVC_					0	0	0		nc|ENSG00000173692|Q99460-2|PSMD1;ENSG00000173692|ENST00000308696|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3427734375	2	589.299724	1176.5849	-1.3242	-0.00078038	-3.8768	-0.0022846	-5.2011	-0.003065	589.2966741629143	94.702	0.2086	94.905	94.777	94.986	0.20242					6	4	2	0	0	0	0.37624	1	9626	9626		36.447	19.729	1	48793			26326	6880	17722	17732	30039	30039					0.0036663505152318976
LEKPDFVLK	9	Unmodified	_LEKPDFVLK_					0	0	0			REV__ENSG00000150760|ENST00000623213|DOCK1	REV__ENSG00000150760|ENST00000623213|DOCK1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.8233032226562	2	544.82115	1087.62775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.234	1	51.986	51.486	52.486	0.75174								0	0	0	0.38919	1	5098	5098		52.937	1.744	1		+		26327	20220	17723	17733	30040	30040					0.08743773171227076
LEKPHLKLADF	11	Unmodified	_LEKPHLKLADF_					0	0	0		nc|ENSG00000140474|Q6PHR2-2|ULK3;ENST00000570276.5_1_15:75132809-75135659:-|nuORF;nc|ENSG00000140474|Q6PHR2-3|ULK3;ENSG00000140474|ENST00000440863|ULK3;nc|ENSG00000140474|Q6PHR2-4|ULK3	nc|ENSG00000140474|Q6PHR2-2|ULK3	nc|ENSG00000140474|Q6PHR2-2|ULK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.5875244140625	3	437.587084	1309.73942	1.166	0.00051025	2.5893	0.001133	3.7553	0.0016433	437.58791392016474	50.336	0.81401	51.181	50.934	51.748	0.84501					47	19	3	0	0	0	0.69071	1	4972	4972		33.039	6.2897	1	989200			26328	4436	17724	17734	30041	30041					0.09694207528355037
LEKPLVPS	8	Unmodified	_LEKPLVPS_					0	0	0			REV__ENST00000220597.4_1_8:81888157-81888412:-|nuORF	REV__ENST00000220597.4_1_8:81888157-81888412:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7683410644531	2	441.768386	881.522219	-1.395	-0.00061625	0.77723	0.00034336	-0.61772	-0.00027289	441.7686373014596	107.04	1.3051	107.18	106.55	107.86	0.13866					69	31	3	0	0	0	0.91977	1	11492	11492		45.952	7.1458	1	2385100	+		26329	24154	17725	17735	30042	30042					0.07671857045613706
LEKPPQSLLIG	11	Unmodified	_LEKPPQSLLIG_					0	0	0			REV__ENST00000590153.1_1_17:28252476-28257245:-|nuORF	REV__ENST00000590153.1_1_17:28252476-28257245:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.856201171875	2	597.858264	1193.70197	-0.32365	-0.0001935	-2.0329	-0.0012154	-2.3566	-0.0014089	598.3588954923197	94.611	4.9065	94.611	93.622	98.528	0					293	115	3	0	0	0	0.66009	1	9488	9488		37.508	1.0614	1	5706300	+		26330	29174	17726	17736	30043	30043					0.11287116262769814
LEKPPQSLLIG	11	Unmodified	_LEKPPQSLLIG_					0	0	0			REV__ENST00000590153.1_1_17:28252476-28257245:-|nuORF	REV__ENST00000590153.1_1_17:28252476-28257245:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.85595703125	2	597.858264	1193.70197	-0.56225	-0.00033615	-2.7782	-0.001661	-3.3405	-0.0019971	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.638	1	9575	9575		40.058	9.7405	1	2042000	+		26331	29174	17726	17736	30044	30044					0.11287116262769814
LEKPPQSLLIG	11	Unmodified	_LEKPPQSLLIG_					0	0	0			REV__ENST00000590153.1_1_17:28252476-28257245:-|nuORF	REV__ENST00000590153.1_1_17:28252476-28257245:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8560180664062	2	597.858264	1193.70197	-1.2962	-0.00077492	-1.6524	-0.0009879	-2.9486	-0.0017628	598.3589924641743	94.317	5.5544	94.515	93.356	98.911	0.19827					368	130	4	0	0	0	0.66009	1	9627	9627		37.508	1.0614	1	9481100	+		26332	29174	17726	17736	30045	30045					0.11287116262769814
LEKPRGRKKT	10	Unmodified	_LEKPRGRKKT_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.2322082519531	3	404.922689	1211.74624	0.29261	0.00011848	-0.7899	-0.00031985	-0.4973	-0.00020137	404.92246891895223	25.647	0.31943	25.671	25.386	25.706	0.024021					19	15	2	0	0	0	0.37624	1	925	925		14.086	0	1	31937			26333	1504	17727	17737	30046	30046					0.14883565199602344
LEKPTKFIN	9	Unmodified	_LEKPTKFIN_					0	0	0			REV__ENSG00000237330|ENST00000453464|RNF223	REV__ENSG00000237330|ENST00000453464|RNF223	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3178100585938	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.54908	1	10247	10247		49.536	7.1399	1	4868200	+		26334	23795	17728	17738	30047	30047					0.08222889028502323
LEKQIATLH	9	Unmodified	_LEKQIATLH_					0	0	0		ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8081665039062	2	526.808574	1051.60259	2.0771	0.0010942	-3.8443	-0.0020252	-1.7672	-0.00093099	526.8065947880607	99.033	1.2732	99.395	98.525	99.798	0.36137					108	31	5	0	0	0	0.30689	1	12004	12004		64.207	8.7031	1	32054000			26335	1829	17729	17739	30048	30048					0.07885718368675043
LEKQIATLH	9	Unmodified	_LEKQIATLH_					0	0	0		ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8080444335938	2	526.808574	1051.60259	2.118	0.0011158	-3.9797	-0.0020965	-1.8617	-0.00098074	526.8064931441075	99.786	1.2202	100.12	99.379	100.6	0.33295					60	16	4	0	0	0	0.38563	1	12040	12040		58.782	0	1	16521000			26336	1829	17729	17739	30049	30049					0.07885718368675043
LEKQIATLH	9	Unmodified	_LEKQIATLH_					0	0	0		ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8074951171875	2	526.808574	1051.60259	2.1591	0.0011374	-4.2531	-0.0022406	-2.0941	-0.0011032	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.41566	1	12311	12311		56.721	5.3856	1	36320000			26337	1829	17729	17739	30050	30050					0.07885718368675043
LEKQIATLH	9	Unmodified	_LEKQIATLH_					0	0	0		ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8081665039062	2	526.808574	1051.60259	1.8843	0.00099267	-3.7441	-0.0019724	-1.8598	-0.00097976	526.806675241247	99.062	1.2342	99.425	98.602	99.837	0.36292					102	30	5	0	0	0	0.17307	1	12055	12055		79.451	0	1	32274000			26338	1829	17729	17739	30051	30051					0.07885718368675043
LEKQLKEVF	9	Unmodified	_LEKQLKEVF_					0	0	0		nc|ENSG00000187398|Q86TE4-3|LUZP2;nc|ENSG00000187398|Q86TE4-2|LUZP2;ENST00000405855.6_1_11:24518789-24853530:+|nuORF;ENST00000531187.5_1_11:24518651-24912476:+|nuORF;ENST00000449567.6_1_11:24518651-24807587:+|nuORF;ENSG00000187398|ENST00000336930|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297729492188	2	567.331882	1132.64921	-0.54401	-0.00030863	-2.6363	-0.0014957	-3.1803	-0.0018043	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.7932	1	8870	8870		25.574	1.0549	1	4477200			26339	7854	17730	17740	30052	30052					0.0881915819995811
LEKQLKEVF	9	Unmodified	_LEKQLKEVF_					0	0	0		nc|ENSG00000187398|Q86TE4-3|LUZP2;nc|ENSG00000187398|Q86TE4-2|LUZP2;ENST00000405855.6_1_11:24518789-24853530:+|nuORF;ENST00000531187.5_1_11:24518651-24912476:+|nuORF;ENST00000449567.6_1_11:24518651-24807587:+|nuORF;ENSG00000187398|ENST00000336930|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.329833984375	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.7932	1	9108	9108		25.574	0	1	11042000			26340	7854	17730	17740	30053	30053					0.0881915819995811
LEKQLKEVF	9	Unmodified	_LEKQLKEVF_					0	0	0		nc|ENSG00000187398|Q86TE4-3|LUZP2;nc|ENSG00000187398|Q86TE4-2|LUZP2;ENST00000405855.6_1_11:24518789-24853530:+|nuORF;ENST00000531187.5_1_11:24518651-24912476:+|nuORF;ENST00000449567.6_1_11:24518651-24807587:+|nuORF;ENSG00000187398|ENST00000336930|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3300170898438	2	567.331882	1132.64921	-1.2007	-0.00068122	-1.9524	-0.0011076	-3.1531	-0.0017889	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.7932	1	9184	9184		25.574	1.0549	1	5763000			26341	7854	17730	17740	30054	30054					0.0881915819995811
LEKQLKEVF	9	Unmodified	_LEKQLKEVF_					0	0	0		nc|ENSG00000187398|Q86TE4-3|LUZP2;nc|ENSG00000187398|Q86TE4-2|LUZP2;ENST00000405855.6_1_11:24518789-24853530:+|nuORF;ENST00000531187.5_1_11:24518651-24912476:+|nuORF;ENST00000449567.6_1_11:24518651-24807587:+|nuORF;ENSG00000187398|ENST00000336930|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3292236328125	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.76255	1	9839	9839		35.618	0	1	15673000			26342	7854	17730	17740	30055	30055					0.0881915819995811
LEKQLKEVF	9	Unmodified	_LEKQLKEVF_					0	0	0		nc|ENSG00000187398|Q86TE4-3|LUZP2;nc|ENSG00000187398|Q86TE4-2|LUZP2;ENST00000405855.6_1_11:24518789-24853530:+|nuORF;ENST00000531187.5_1_11:24518651-24912476:+|nuORF;ENST00000449567.6_1_11:24518651-24807587:+|nuORF;ENSG00000187398|ENST00000336930|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3297729492188	2	567.331882	1132.64921	0.48094	0.00027285	-3.8594	-0.0021896	-3.3785	-0.0019167	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.7932	1	8969	8969		25.574	1.0549	1	6590100			26343	7854	17730	17740	30056	30056					0.0881915819995811
LEKQLKEVF	9	Unmodified	_LEKQLKEVF_					0	0	0		nc|ENSG00000187398|Q86TE4-3|LUZP2;nc|ENSG00000187398|Q86TE4-2|LUZP2;ENST00000405855.6_1_11:24518789-24853530:+|nuORF;ENST00000531187.5_1_11:24518651-24912476:+|nuORF;ENST00000449567.6_1_11:24518651-24807587:+|nuORF;ENSG00000187398|ENST00000336930|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	nc|ENSG00000187398|Q86TE4-3|LUZP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3301391601562	2	567.331882	1132.64921	-1.3957	-0.00079181	-1.9666	-0.0011157	-3.3623	-0.0019075	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.76419	2	8879	8879;9023		35.152	4.8343	1	5956400			26344	7854	17730	17740	30057;30058	30057					0.0881915819995811
LEKQLKQVQVP	11	Unmodified	_LEKQLKQVQVP_					0	0	0			REV__ENSG00000113615|ENST00000398844|SEC24A	REV__ENSG00000113615|ENST00000398844|SEC24A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.267822265625	3	437.266122	1308.77654	0.29718	0.00012995	3.7454	0.0016377	4.0425	0.0017677	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.75121	2	4094	4094;4199		21.78	0.74819	1	4533800	+		26345	18003	17731	17741	30059;30060	30059					0.13449879074119053
LEKQLQFFQD	10	Unmodified	_LEKQLQFFQD_					0	0	0		ENSG00000178607|ENST00000433197|ERN1	ENSG00000178607|ENST00000433197|ERN1	ENSG00000178607|ENST00000433197|ERN1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3927001953125	2	648.335153	1294.65575	-1.141	-0.00073972	3.956	0.0025648	2.8151	0.0018251	648.337007315174	107.32	0.36613	107.35	107.21	107.58	0.036118					10	8	2	0	0	0	0.37624	1	11451	11451		30.318	1.1477	1	84571			26346	7214	17732	17742	30061	30061					0.020210513606571112
LEKRGLDM	8	Unmodified	_LEKRGLDM_					0	0	0		ENSG00000124143|ENST00000373345|ARHGAP40	ENSG00000124143|ENST00000373345|ARHGAP40	ENSG00000124143|ENST00000373345|ARHGAP40	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.93218994140625	2	481.260402	960.506251	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.457	1	70.004	69.504	70.504	0.54693								0	0	0	0.29245	1	7697	7697		30.504	2.2494	1				26347	3308	17733	17743	30062	30062					0.024418275370635456
LEKRKHTQLV	10	Unmodified	_LEKRKHTQLV_					0	0	0		ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000095539|Q9NTN9|SEMA4G	ENSG00000095539|ENST00000210633|SEMA4G	ENSG00000095539|ENST00000210633|SEMA4G	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3788452148438	2	626.380229	1250.7459	-0.22979	-0.00014393	-0.741	-0.00046415	-0.97079	-0.00060808	626.3796521317021	105.9	2.4813	105.88	105.06	107.54	-0.025146					298	58	6	0	0	0	0.85981	1	11394	11394		35.152	3.6222	1	47647000			26348	1729	17734	17744	30063	30063					0.13056145479754377
LEKRLTLEP	9	Unmodified	_LEKRLTLEP_					0	0	0		ENSG00000128881|ENST00000267890|TTBK2;nc|ENSG00000128881|Q6IQ55-2|TTBK2;nc|ENSG00000128881|Q6IQ55-3|TTBK2	ENSG00000128881|ENST00000267890|TTBK2	ENSG00000128881|ENST00000267890|TTBK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.8295288085938	2	549.829506	1097.64446	-1.509	-0.0008297	1.0078	0.00055412	-0.50121	-0.00027558	549.829981948683	48.545	1.2936	49.015	48.546	49.84	0.46941					84	31	4	0	0	0	0.065196	1	4665	4665		101.6	0	1	6848200			26349	3565	17735	17745	30064	30064					0.09954274057213297
LEKRPKLP	8	Unmodified	_LEKRPKLP_					0	0	0			REV__ENSG00000011201|ENST00000262648|ANOS1	REV__ENSG00000011201|ENST00000262648|ANOS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.8153991699219	2	490.816202	979.617851	-0.95094	-0.00046674	-0.52084	-0.00025564	-1.4718	-0.00072237	490.8158025749221	74.022	0.86785	74.411	74.042	74.91	0.38921					46	20	3	0	0	0	0.84341	1	8316	8316		24.203	0	1	603920	+		26350	16180	17736	17746	30065	30065					0.127226299565109
LEKRRRERQI	10	Unmodified	_LEKRRRERQI_					0	0	0			REV__nc|ENSG00000119509|Q9Y283-2|INVS	REV__nc|ENSG00000119509|Q9Y283-2|INVS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.9478454589844	3	461.947898	1382.82186	-1.7388	-0.00080326	2.5503	0.0011781	0.81148	0.00037486	461.9489824090098	112.48	0.4062	112.45	112.28	112.69	-0.032333					17	10	3	0	0	0	0.86151	1	11998	11998		15.333	1.2471	1	185670	+		26351	18355	17737	17747	30066	30066					0.14576542379904822
LEKRYQSLRS	10	Unmodified	_LEKRYQSLRS_					0	0	0			REV__ENSG00000072818|ENST00000158762|ACAP1	REV__ENSG00000072818|ENST00000158762|ACAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3596801757812	2	640.359493	1278.70443	-0.067952	-4.3514E-05	-0.91045	-0.00058301	-0.9784	-0.00062653	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.86218	1	10625	10625		32.812	2.4947	1	640120	+		26352	16658	17738	17748	30067	30067					0.07622964720417258
LEKSAKKDSK	10	Unmodified	_LEKSAKKDSK_					0	0	0		ENSG00000182621|ENST00000338037|PLCB1;nc|ENSG00000182621|Q9NQ66-2|PLCB1	ENSG00000182621|ENST00000338037|PLCB1	ENSG00000182621|ENST00000338037|PLCB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3299560546875	2	567.32987	1132.64519	-0.51077	-0.00028978	0.47287	0.00026828	-0.037898	-2.1501E-05	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.85979	1	9466	9466		35.178	3.6484	1	11042000			26353	7465	17739	17749	30068	30068					0.08417068706239661
LEKSEARR	8	Unmodified	_LEKSEARR_					0	0	0		ENSG00000197616|ENST00000405093|MYH6;ENSG00000092054|ENST00000355349|MYH7	ENSG00000197616|ENST00000405093|MYH6	ENSG00000197616|ENST00000405093|MYH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.78057861328125	2	494.780348	987.546142	-0.85772	-0.00042438	0.93735	0.00046378	0.07963	3.9399E-05	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.8347	1	8817	8817		23.042	0	1	737700			26354	8183	17740	17750	30069	30069					0.05187090532001548
LEKSFCFFL	9	Unmodified	_LEKSFCFFL_					0	0	0			REV__ENST00000402538.7_1_2:33789494-33789701:+|nuORF	REV__ENST00000402538.7_1_2:33789494-33789701:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.329833984375	2	567.288628	1132.5627	0.79594	0.00045153	0.68183	0.00038679	1.4778	0.00083832	567.2882707793211	92.739	0.24669	92.898	92.794	93.04	0.15875					8	5	2	0	0	0	0.20789	1	9391	9391		34.173	7.4796	1	38435	+		26355	26262	17741	17751	30070	30070					0.0017245537374037667
LEKSHLRRGL	10	Unmodified	_LEKSHLRRGL_					0	0	0		ENST00000515251.1_1_4:120376278-120381900:+|nuORF	ENST00000515251.1_1_4:120376278-120381900:+|nuORF	ENST00000515251.1_1_4:120376278-120381900:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8717651367188	2	604.864746	1207.71494	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.2	1	119.18	118.68	119.68	-0.024033								0	0	0	0.45132	1	13209	13209		18.262	0	1				26356	13078	17742	17752	30071	30071					0.11938992165505624
LEKSKRSSK	9	Unmodified	_LEKSKRSSK_					0	0	0		nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8167114257812	2	531.81693	1061.61931	1.1723	0.00062347	-1.3006	-0.00069169	-0.12827	-6.8217E-05	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.7932	1	9221	9221		25.574	4.6271	1	4413000			26357	4093	17743	17753	30072	30072					0.09096219254638527
LEKSKSFFAR	10	Unmodified	_LEKSKSFFAR_					0	0	0			REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	REV__ENST00000542376.5_1_11:63999367-64000338:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.929443359375	3	404.896029	1211.66626	-0.91932	-0.00037223	4.3412	0.0017577	3.4219	0.0013855	404.8978840083668	46.331	0.4098	46.302	46.139	46.549	-0.028782					12	9	2	0	0	0	0.37624	1	3819	3819		17.833	11.832	1	45510	+		26358	17786	17744	17754	30073	30073					0.06889078805761528
LEKSLELPK	9	Unmodified	_LEKSLELPK_					0	0	0		ENST00000216121.11_1_22:29951269-29951446:-|nuORF	ENST00000216121.11_1_22:29951269-29951446:-|nuORF	ENST00000216121.11_1_22:29951269-29951446:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7637329101562	2	528.818607	1055.62266	-0.2923	-0.00015457	-1.074	-0.00056795	-1.3663	-0.00072252	528.8184982197035	60.522	0.53439	60.912	60.645	61.18	0.38945					24	14	2	0	0	0	0.20789	1	6447	6447		67.494	31.047	1	417250			26359	9128	17745	17755	30074	30074					0.09707469308591499
LEKSLRKSL	9	Unmodified	_LEKSLRKSL_					0	0	0		nc|ENSG00000149124|Q6IB77-2|GLYAT;ENSG00000149124|ENST00000344743|GLYAT	nc|ENSG00000149124|Q6IB77-2|GLYAT	nc|ENSG00000149124|Q6IB77-2|GLYAT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3268432617188	2	537.337498	1072.66044	1.2453	0.00066913	-2.0785	-0.0011169	-0.83325	-0.00044774	537.3360463191775	100.22	0.96493	100.26	99.851	100.82	0.046356					30	21	2	0	0	0	0.20789	1	10810	10810		44.377	0	1	44128			26360	4998	17746	17756	30075	30075					0.12701980294104942
LEKSMKKQILR	11	Unmodified	_LEKSMKKQILR_					0	0	0		ENST00000422760.1_1_7:117828449-117832039:+|nuORF	ENST00000422760.1_1_7:117828449-117832039:+|nuORF	ENST00000422760.1_1_7:117828449-117832039:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.6238098144531	3	458.614757	1372.82244	0.76215	0.00034953	-4.379	-0.0020083	-3.6168	-0.0016587	458.6131491787032	106.84	0.17172	106.93	106.82	106.99	0.091255					5	3	2	0	0	0	0.1745	1	11438	11438		23.378	0	1	36142			26361	11486	17747	17757	30076	30076					0.15094200984731287
LEKSRAVRQAK	11	Unmodified	_LEKSRAVRQAK_					0	0	0		nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;ENSG00000133026|ENST00000360416|MYH10	nc|ENSG00000133026|P35580|MYH10	nc|ENSG00000133026|P35580|MYH10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4058227539062	2	643.388585	1284.76262	0.94295	0.00060668	-0.47387	-0.00030488	0.46908	0.0003018	643.8901030450361	106.84	0.17172	106.93	106.82	106.99	0.091255					5	3	2	0	0	0	0.14841	1	11454	11454		69.628	18.435	1	47210			26362	3848	17748	17758	30077	30077					0.1316264636568576
LEKSRLKN	8	Unmodified	_LEKSRLKN_					0	0	0		ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.30078125	2	494.300916	986.587279	-0.67103	-0.00033169	0.2629	0.00012995	-0.40813	-0.00020174	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.89043	1	10420	10420		35.618	2.1027	1	54981000			26363	1902	17749	17759	30078	30078					0.09344851571484014
LEKSRLKN	8	Unmodified	_LEKSRLKN_					0	0	0		ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3007507324219	2	494.300916	986.587279	0.76681	0.00037903	-1.1549	-0.00057088	-0.38812	-0.00019185	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.89043	1	10009	10009		35.618	3.6634	1	52135000			26364	1902	17749	17759	30079	30079					0.09344851571484014
LEKSYLLVVAS	11	Unmodified	_LEKSYLLVVAS_					0	0	0			REV__ENSG00000116906|ENST00000366647|GNPAT	REV__ENSG00000116906|ENST00000366647|GNPAT	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3545532226562	2	611.358096	1220.70164	-0.25906	-0.00015838	-3.0986	-0.0018944	-3.3577	-0.0020528	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.60058	1	9364	9364		44.377	3.599	1	3360200	+		26365	18233	17750	17760	30080	30080					0.10011696542937898
LEKSYLLVVAS	11	Unmodified	_LEKSYLLVVAS_					0	0	0			REV__ENSG00000116906|ENST00000366647|GNPAT	REV__ENSG00000116906|ENST00000366647|GNPAT	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3554077148438	2	611.358096	1220.70164	-0.22744	-0.00013904	-2.3258	-0.0014219	-2.5533	-0.001561	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.7144	1	9547	9547		29.17	1.0886	1	8715400	+		26366	18233	17750	17760	30081	30081					0.10011696542937898
LEKSYLLVVAS	11	Unmodified	_LEKSYLLVVAS_					0	0	0			REV__ENSG00000116906|ENST00000366647|GNPAT	REV__ENSG00000116906|ENST00000366647|GNPAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3538208007812	2	611.358096	1220.70164	-0.40517	-0.00024771	-3.117	-0.0019056	-3.5221	-0.0021533	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.60058	2	9766	9766;9813		44.377	3.599	1	5373200	+		26367	18233	17750	17760	30082;30083	30082					0.10011696542937898
LEKSYLLVVAS	11	Unmodified	_LEKSYLLVVAS_					0	0	0			REV__ENSG00000116906|ENST00000366647|GNPAT	REV__ENSG00000116906|ENST00000366647|GNPAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3555908203125	2	611.358096	1220.70164	-0.40504	-0.00024762	-2.2662	-0.0013854	-2.6712	-0.0016331	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.7144	1	10101	10101		29.17	3.596	1	12417000	+		26368	18233	17750	17760	30084	30084					0.10011696542937898
LEKSYLLVVAS	11	Unmodified	_LEKSYLLVVAS_					0	0	0			REV__ENSG00000116906|ENST00000366647|GNPAT	REV__ENSG00000116906|ENST00000366647|GNPAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3524780273438	2	611.358096	1220.70164	0.21558	0.0001318	-3.6738	-0.002246	-3.4582	-0.0021142	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.638	2	9989	9881;9989		40.058	0.82846	1	5379900	+		26369	18233	17750	17760	30085;30086	30086					0.10011696542937898
LEKSYLLVVAS	11	Unmodified	_LEKSYLLVVAS_					0	0	0			REV__ENSG00000116906|ENST00000366647|GNPAT	REV__ENSG00000116906|ENST00000366647|GNPAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3551025390625	2	611.358096	1220.70164	0.85002	0.00051967	-4.3059	-0.0026324	-3.4558	-0.0021128	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.66929	2	9589	9589;9613		36.447	6.129	1	6836400	+		26370	18233	17750	17760	30087;30088	30087					0.10011696542937898
LEKSYLLVVAS	11	Unmodified	_LEKSYLLVVAS_					0	0	0			REV__ENSG00000116906|ENST00000366647|GNPAT	REV__ENSG00000116906|ENST00000366647|GNPAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.354736328125	2	611.358096	1220.70164	-1.2523	-0.00076561	-2.209	-0.0013505	-3.4613	-0.0021161	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.66929	5	9461	9461;9533;9545;9633;9670		36.447	3.6343	1	5978100	+		26371	18233	17750	17760	30089;30090;30091;30092;30093	30089					0.10011696542937898
LEKSYLLVVAS	11	Unmodified	_LEKSYLLVVAS_					0	0	0			REV__ENSG00000116906|ENST00000366647|GNPAT	REV__ENSG00000116906|ENST00000366647|GNPAT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3543090820312	2	611.358096	1220.70164	1.8406	0.0011253	-4.3442	-0.0026559	-2.5036	-0.0015306	611.3554755611618	95.715	4.0888	96.135	95.146	99.235	0.42051					346	99	4	0	0	0	0.72106	1	11482	11482		28.081	1.3886	1	11372000	+		26372	18233	17750	17760	30094	30094					0.10011696542937898
LEKTAKKG	8	Unmodified	_LEKTAKKG_					0	0	0		ENSG00000095380|ENST00000210444|NANS;ENST00000415280.1_1_9:100839199-100840360:+|nuORF	ENSG00000095380|ENST00000210444|NANS	ENSG00000095380|ENST00000210444|NANS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7707824707031	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.8537	1	2258	2258		25.574	1.0549	1	1151500			26373	1724	17751	17761	30095	30095					0.08654375277149029
LEKTHKRVLGA	11	Unmodified	_LEKTHKRVLGA_					0	0	0			REV__nc|ENSG00000084112|Q8WYL5-4|SSH1	REV__nc|ENSG00000084112|Q8WYL5-4|SSH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.92242431640625	3	417.922578	1250.7459	0.73411	0.0003068	-1.4619	-0.00061096	-0.7278	-0.00030416	417.9219647760214	105.64	2.8346	105.75	104.94	107.78	0.10766					247	69	5	0	0	0	0.7434	1	11339	11339		21.032	0	1	29053000	+		26374	16870	17752	17762	30096	30096					0.13056145479754377
LEKTIVPL	8	Unmodified	_LEKTIVPL_					0	0	0			REV__ENST00000523351.5_1_5:169188379-169509859:+|nuORF	REV__ENST00000523351.5_1_5:169188379-169509859:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7924499511719	2	456.791861	911.569169	-0.0055701	-2.5444E-06	2.9863	0.0013641	2.9807	0.0013616	456.7931079883192	38.776	1.3461	38.723	38.257	39.603	-0.052731					134	39	4	0	0	0	0.81548	1	2380	2380		20.482	0	1	1653300	+		26375	19148	17753	17763	30097	30097					0.10984716596760791
LEKTYRLKKKK	11	Unmodified	_LEKTYRLKKKK_					0	0	0		ENST00000524045.6_1_8:106797143-106799334:-|nuORF	ENST00000524045.6_1_8:106797143-106799334:-|nuORF	ENST00000524045.6_1_8:106797143-106799334:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.308837890625	3	478.976683	1433.90822	-0.41434	-0.00019846	-3.8662	-0.0018518	-4.2805	-0.0020503	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.79476	1	4135	4135		12.433	2.3289	1	341610			26376	13211	17754	17764	30098	30098					0.20862109161862463
LEKVKSAELEK	11	Unmodified	_LEKVKSAELEK_					0	0	0			REV__ENSG00000029725|ENST00000537505|RABEP1	REV__ENSG00000029725|ENST00000537505|RABEP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	637.3684692382812	2	637.371735	1272.72892	0.0096069	6.1232E-06	-1.955	-0.001246	-1.9454	-0.0012399	637.3704089191367	105.98	2.6955	105.98	104.5	107.2	0					156	62	4	0	0	0	0.72739	1	11014	11014		27.047	2.5281	1	1384300	+		26377	16271	17755	17765	30099	30099					0.10346180083251966
LEKVLLQGLP	10	Unmodified	_LEKVLLQGLP_					0	0	0		ENST00000580601.5_1_17:73688374-73688542:+|nuORF	ENST00000580601.5_1_17:73688374-73688542:+|nuORF	ENST00000580601.5_1_17:73688374-73688542:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.353271484375	2	555.350074	1108.6856	3.1602	0.001755	2.6303	0.0014608	5.7905	0.0032158	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.85466	1	11015	11015		20.947	0	1	5616800			26378	14096	17756	17766	30100	30100					0.13560035096679712
LEKVLLQGLP	10	Unmodified	_LEKVLLQGLP_					0	0	0		ENST00000580601.5_1_17:73688374-73688542:+|nuORF	ENST00000580601.5_1_17:73688374-73688542:+|nuORF	ENST00000580601.5_1_17:73688374-73688542:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.3531494140625	2	555.350074	1108.6856	1.3083	0.00072658	4.4118	0.0024501	5.7201	0.0031767	555.3524110053091	100.9	2.53	100.95	100.38	102.91	0.046356					182	60	5	0	0	0	0.85466	2	10907	10835;10907		34.173	8.5985	1	5418400			26379	14096	17756	17766	30101;30102	30102					0.13560035096679712
LEKVQIDSSA	10	Unmodified	_LEKVQIDSSA_					0	0	0			REV__ENST00000465604.1_1_1:26229981-26231212:-|nuORF	REV__ENST00000465604.1_1_1:26229981-26231212:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3167114257812	2	545.292953	1088.57135	1.2586	0.0006863	4.3136	0.0023522	5.5722	0.0030385	545.7963129406902	90.327	1.0703	90.373	89.525	90.595	0.046448					55	24	3	0	0	0	0.37624	1	9317	9317		47.96	23.44	1	159690	+		26380	27111	17757	17767	30103	30103					0.030611005439368455
LEKVRREHK	9	Unmodified	_LEKVRREHK_					0	0	0			REV__ENSG00000264424|ENST00000255381|MYH4;REV__ENSG00000078814|ENST00000262873|MYH7B;REV__ENSG00000125414|ENST00000245503|MYH2	REV__ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8561401367188	2	597.856921	1193.69929	-0.43134	-0.00025788	-0.57301	-0.00034258	-1.0043	-0.00060046	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.73802	1	9928	9928		37.812	0	1	6857100	+		26381	16773;23957;18642	17758	17768	30104	30104					0.11018705648461946
LEKVRREHK	9	Unmodified	_LEKVRREHK_					0	0	0			REV__ENSG00000264424|ENST00000255381|MYH4;REV__ENSG00000078814|ENST00000262873|MYH7B;REV__ENSG00000125414|ENST00000245503|MYH2	REV__ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8561401367188	2	597.856921	1193.69929	0.8216	0.0004912	-2.0016	-0.0011967	-1.18	-0.00070545	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.73802	1	9267	9267		37.812	1.3648	1	2486400	+		26382	16773;23957;18642	17758	17768	30105	30105					0.11018705648461946
LEKVRRYR	8	Unmodified	_LEKVRRYR_					0	0	0			REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3405151367188	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.84341	1	11024	11024		24.203	0	1	81463000	+		26383	15874	17759	17769	30106	30106					0.11267337965318802
LEKVRRYR	8	Unmodified	_LEKVRRYR_					0	0	0			REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3403930664062	2	560.340907	1118.66726	0.86176	0.00048288	-2.22	-0.001244	-1.3582	-0.00076107	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.87922	1	10714	10714		31.955	0	1	126390000	+		26384	15874	17759	17769	30107	30107					0.11267337965318802
LEKVRRYR	8	Unmodified	_LEKVRRYR_					0	0	0			REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3404541015625	2	560.340907	1118.66726	2.2618	0.0012674	-3.4816	-0.0019509	-1.2198	-0.00068351	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.87479	1	12343	12343		30.504	0	1	14759000	+		26385	15874	17759	17769	30108	30108					0.11267337965318802
LEKWLSEP	8	Unmodified	_LEKWLSEP_					0	0	0			REV__nc|ENSG00000154760|Q68D06-2|SLFN13	REV__nc|ENSG00000154760|Q68D06-2|SLFN13	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29052734375	2	501.26875	1000.52295	0.67514	0.00033843	1.3986	0.00070108	2.0738	0.0010395	501.76948908924317	86.528	0.50928	86.677	86.36	86.869	0.14902					14	11	2	0	0	0	0.4196	1	8498	8498		27.882	0	1	220240	+		26386	20400	17760	17770	30109	30109					0.022706516946641386
LEKWTGRKSI	10	Unmodified	_LEKWTGRKSI_					0	0	0		chr3:146073352-146079116|18|15.72|0.73|4.43|-|1|PLOD2,PLOD2|1	chr3:146073352-146079116|18|15.72|0.73|4.43|-|1|PLOD2,PLOD2|1	chr3:146073352-146079116|18|15.72|0.73|4.43|-|1|PLOD2,PLOD2|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.3843994140625	2	609.35368	1216.69281	2.841	0.0017312	0.65161	0.00039706	3.4926	0.0021282	609.3549449506552	99.442	1.4452	99.388	98.997	100.44	-0.053734					60	33	3	0	0	0	0.37624	1	10807	10807		19.104	0.84144	1	109360			26387	390	17761	17771	30110	30110					0.0931276769708802
LEKWTGRKSI	10	Unmodified	_LEKWTGRKSI_					0	0	0		chr3:146073352-146079116|18|15.72|0.73|4.43|-|1|PLOD2,PLOD2|1	chr3:146073352-146079116|18|15.72|0.73|4.43|-|1|PLOD2,PLOD2|1	chr3:146073352-146079116|18|15.72|0.73|4.43|-|1|PLOD2,PLOD2|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	609.35368	1216.69281	-0.43005	-0.00026205	3.4798	0.0021204	3.0497	0.0018584	609.3567718693049	99.568	1.2295	99.609	98.607	99.837	0.0411	0.11027	0.0021285	NaN	19.104	42	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97562			26388	390	17761	17771							0.0931276769708802
LEKYKLLPEY	10	Unmodified	_LEKYKLLPEY_					0	0	0		nc|ENSG00000228716|P00374-2|DHFR;ENSG00000228716|ENST00000439211|DHFR;ENSG00000178700|ENST00000314636|DHFR2	nc|ENSG00000228716|P00374-2|DHFR	nc|ENSG00000228716|P00374-2|DHFR	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3919067382812	2	648.365921	1294.71729	0.024157	1.5663E-05	3.7871	0.0024554	3.8112	0.0024711	648.868563538906	106.58	0.44888	106.58	106.44	106.89	0					18	9	3	0	0	0	0.37624	1	11060	11060		30.318	0	1	48964			26389	7220	17762	17772	30111	30111					0.08171983059946797
LEKYTPVLL	9	Unmodified	_LEKYTPVLL_					0	0	0			REV__ENST00000412639.2_1_1:9251518-9251692:+|nuORF	REV__ENST00000412639.2_1_1:9251518-9251692:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3265380859375	2	538.323525	1074.6325	3.4335	0.0018483	2.8142	0.001515	6.2477	0.0033633	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.67345	3	11073	10965;11073;11194		42.396	5.237	1	75550000	+		26390	26384	17763	17773	30112;30113;30114	30113					0.09816657313990618
LEKYTPVLL	9	Unmodified	_LEKYTPVLL_					0	0	0			REV__ENST00000412639.2_1_1:9251518-9251692:+|nuORF	REV__ENST00000412639.2_1_1:9251518-9251692:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3263549804688	2	538.323525	1074.6325	3.5618	0.0019174	3.4053	0.0018331	6.967	0.0037505	538.3252790877391	103.43	1.149	103.39	103.04	104.18	-0.043755					64	27	3	0	0	0	0.58668	2	11339	11339;11351		47.657	2.6427	1	1012900	+		26391	26384	17763	17773	30115;30116	30115					0.09816657313990618
LELAAILAL	9	Unmodified	_LELAAILAL_					0	0	0			REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8003845214844	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3249	3249		24.203	2.2429	1	890090	+		26392	19497	17764	17774	30117	30117					0.11905003113804469
LELAAILAL	9	Unmodified	_LELAAILAL_					0	0	0			REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8003234863281	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3294	3294		13.775	0	1	1516700	+		26393	19497	17764	17774	30118	30118					0.11905003113804469
LELAAILAL	9	Unmodified	_LELAAILAL_					0	0	0			REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.80078125	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	3179	3179		18.324	0	1	1231300	+		26394	19497	17764	17774	30119	30119					0.11905003113804469
LELAAILAL	9	Unmodified	_LELAAILAL_					0	0	0			REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8009033203125	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.7932	1	3323	3323		12.207	0	1	210360	+		26395	19497	17764	17774	30120	30120					0.11905003113804469
LELAAILAL	9	Unmodified	_LELAAILAL_					0	0	0			REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8020935058594	2	463.799686	925.584819	-0.22039	-0.00010222	2.8768	0.0013343	2.6564	0.0012321	463.80077563915114	45.485	0.74849	45.417	45.021	45.77	-0.068634					44	18	3	0	0	0	0.7932	1	3245	3245		17.365	3.5896	1	207040	+		26396	19497	17764	17774	30121	30121					0.11905003113804469
LELAAILAL	9	Unmodified	_LELAAILAL_					0	0	0			REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	REV__nc|ENSG00000138698|P52306-6|RAP1GDS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8005676269531	2	463.799686	925.584819	-0.24475	-0.00011352	3.0643	0.0014212	2.8195	0.0013077	463.8008545525102	46.185	0.71794	46.106	45.759	46.477	-0.079006					36	20	2	0	0	0	0.7932	1	3354	3354		26.796	1.3459	1	192340	+		26397	19497	17764	17774	30122	30122					0.11905003113804469
LELADLPLK	9	Unmodified	_LELADLPLK_					0	0	0		ENST00000465952.5_1_13:31205167-31205455:+|nuORF	ENST00000465952.5_1_13:31205167-31205455:+|nuORF	ENST00000465952.5_1_13:31205167-31205455:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.30767822265625	2	506.307875	1010.6012	-1.5415	-0.00078047	2.7011	0.0013676	1.1596	0.00058712	506.3093285794098	44.216	2.5192	44.216	43.58	46.099	0					89	61	3	0	0	0	0.78983	1	3287	3287		27.882	5.9224	1	527690			26398	12119	17765	17775	30123	30123					0.09632084279905939
LELADLPLK	9	Unmodified	_LELADLPLK_					0	0	0		ENST00000465952.5_1_13:31205167-31205455:+|nuORF	ENST00000465952.5_1_13:31205167-31205455:+|nuORF	ENST00000465952.5_1_13:31205167-31205455:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.31231689453125	2	506.307875	1010.6012	-0.014787	-7.4865E-06	3.0125	0.0015252	2.9977	0.0015177	506.30972671397376	55.698	1.2777	55.687	54.879	56.156	-0.010132					50	34	2	0	0	0	0.76255	1	5025	5025		35.618	1.4457	1	84595			26399	12119	17765	17775	30124	30124					0.09632084279905939
LELAGLPSPK	10	Unmodified	_LELAGLPSPK_					0	0	0			REV__ENSG00000141574|ENST00000269389|SECTM1	REV__ENSG00000141574|ENST00000269389|SECTM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.2704467773438	2	512.8055	1023.59645	-1.1523	-0.00059093	-1.4255	-0.00073103	-2.5779	-0.001322	512.8063927731446	76.106	0.40897	76.195	75.932	76.341	0.089363					13	12	2	0	0	0	0.37624	1	7080	7080		13.454	6.2607	1	34804	+		26400	19699	17766	17776	30125	30125					0.08559200137142398
LELAKQMNEES	11	Unmodified	_LELAKQMNEES_					0	0	0			REV__ENSG00000138095|ENST00000260665|LRPPRC	REV__ENSG00000138095|ENST00000260665|LRPPRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	646.3135375976562	2	646.31356	1290.61257	0.059115	3.8207E-05	0.63921	0.00041313	0.69833	0.00045134	646.3137994975637	65.71	0.77345	66.095	65.849	66.623	0.38582					51	20	3	0	0	0	0.31387	1	7170	7170		72.879	21.687	1	1937000	+		26401	19440	17767	17777	30126	30126					-0.0211150647892282
LELAKQMNEES	11	Unmodified	_LELAKQMNEES_					0	0	0			REV__ENSG00000138095|ENST00000260665|LRPPRC	REV__ENSG00000138095|ENST00000260665|LRPPRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	646.3111572265625	2	646.31356	1290.61257	1.6185	0.0010461	-1.0024	-0.00064785	0.61613	0.00039821	646.3126890190069	65.59	0.7719	66.143	65.869	66.641	0.5526					54	21	4	0	0	0	0.32928	1	7178	7178		67.494	17.958	1	2309700	+		26402	19440	17767	17777	30127	30127					-0.0211150647892282
LELALFFKGP	10	Unmodified	_LELALFFKGP_					0	0	0		ENST00000271332.3_1_1:109817722-109817794:+|nuORF	ENST00000271332.3_1_1:109817722-109817794:+|nuORF	ENST00000271332.3_1_1:109817722-109817794:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.8330688476562	2	567.831517	1133.64848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.7	1	116.67	116.17	117.17	-0.02433								0	0	0	0.45132	1	12927	12927		27.882	3.3631	1				26403	9560	17768	17778	30128	30128					0.08700363550906332
LELARVVLPVL	11	Unmodified	_LELARVVLPVL_					0	0	0			REV__ENSG00000167705|ENST00000301336|RILP	REV__ENSG00000167705|ENST00000301336|RILP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.35546875	2	611.400099	1220.78564	-1.2524	-0.00076572	2.6606	0.0016267	1.4081	0.00086094	611.4019444968085	95.923	0.17049	96.126	95.977	96.147	0.20242					5	3	2	0	0	0	0.17564	1	9800	9800		9.7057	2.9701	1	34369	+		26404	21421	17769	17779	30129	30129					0.18408272430474426
LELAVYGLL	9	Unmodified	_LELAVYGLL_					0	0	0		nc|ENSG00000100258|Q9BU23-3|LMF2;nc|ENSG00000100258|Q9BU23-2|LMF2;ENSG00000100258|ENST00000474879|LMF2;ENST00000514938.1_1_22:50943733-50944613:-|nuORF	nc|ENSG00000100258|Q9BU23-3|LMF2	nc|ENSG00000100258|Q9BU23-3|LMF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7970886230469	2	495.797143	989.579734	3.6416	0.0018055	-3.7269	-0.0018478	-0.085301	-4.2292E-05	495.7951678077777	105.11	0.93385	105.34	105.01	105.95	0.2268					55	22	3	0	0	0	0.49378	1	12887	12887		52.299	11.521	1	568440			26405	1813	17770	17780	30130	30130					0.08452699251199647
LELCDDANP	9	Unmodified	_LELCDDANP_					0	0	0		ENSG00000164794|ENST00000524391|KCNV1	ENSG00000164794|ENST00000524391|KCNV1	ENSG00000164794|ENST00000524391|KCNV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.21600341796875	2	495.215857	988.417161	0.22046	0.00010917	0.96918	0.00047996	1.1896	0.00058913	495.21622401172385	39.926	0.5652	39.896	39.565	40.13	-0.03027					28	13	3	0	0	0	0.76764	1	2808	2808		34.173	3.6689	1	136570			26406	6003	17771	17781	30131	30131					-0.07751052213120602
LELDEEVKG	9	Unmodified	_LELDEEVKG_					0	0	0			REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF;REV__ENSG00000197816|ENST00000529487|CCDC180	REV__ENST00000529787.2_1_9:100053158-100088872:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2642822265625	2	516.266404	1030.51826	-0.7088	-0.00036593	0.47854	0.00024706	-0.23026	-0.00011888	516.2664147069039	45.068	0.56936	45.912	45.667	46.236	0.84438					29	13	3	0	0	0	0.30689	1	4190	4190		64.207	0	1	617380	+		26407	25809;23272	17772	17782	30132	30132					0.004217227612343777
LELDMTPFLA	10	Unmodified	_LELDMTPFLA_					0	0	0		ENSG00000247746|ENST00000500968|USP51	ENSG00000247746|ENST00000500968|USP51	ENSG00000247746|ENST00000500968|USP51	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.2984008789062	2	575.29665	1148.57875	-0.62013	-0.00035676	2.0722	0.0011921	1.452	0.00083535	575.2976575807905	42.796	0.68694	42.766	42.497	43.184	-0.029461					33	16	3	0	0	0	0.86589	1	3213	3213		29.15	2.4566	1	227850			26408	8829	17773	17783	30133	30133					0.010401168199905442
LELDPLLIS	9	Unmodified	_LELDPLLIS_					0	0	0			REV__ENSG00000187889|ENST00000343433|FYB2	REV__ENSG00000187889|ENST00000343433|FYB2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.7998046875	2	506.799883	1011.58521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.724	1	43.732	43.232	44.232	0.0084534								0	0	0	0.28772	1	3034	3034		35.618	5.1146	1		+		26409	22959	17774	17784	30134	30134					0.07988378043023658
LELDPLLIS	9	Unmodified	_LELDPLLIS_					0	0	0			REV__ENSG00000187889|ENST00000343433|FYB2	REV__ENSG00000187889|ENST00000343433|FYB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.7987976074219	2	506.799883	1011.58521	0.30542	0.00015478	2.0359	0.0010318	2.3413	0.0011866	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.7932	1	3211	3211		24.203	0	1	412810	+		26410	22959	17774	17784	30135	30135					0.07988378043023658
LELEILENPPE	11	Unmodified	_LELEILENPPE_					0	0	0		nc|ENSG00000075151|O43432|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-2|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5976867675781	3	432.562493	1294.66565	2.4125	0.0010435	-0.20869	-9.0273E-05	2.2038	0.00095327	432.5624798970914	106.31	0.25877	106.35	106.24	106.5	0.03688					7	5	2	0	0	0	0.17347	1	11651	11651		10.998	7.5895	1	47440			26411	1320	17775	17785	30136	30136					0.030101945753813197
LELELGLVP	9	Unmodified	_LELELGLVP_					0	0	0		nc|ENSG00000170581|P52630-4|STAT2;ENSG00000170581|ENST00000314128|STAT2;ENST00000556539.5_1_12:56737175-56743495:-|nuORF	nc|ENSG00000170581|P52630-4|STAT2	nc|ENSG00000170581|P52630-4|STAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7954406738281	2	491.794601	981.574648	-0.47857	-0.00023536	2.9858	0.0014684	2.5072	0.001233	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.7932	1	4720	4720		25.45	1.2474	1	1898900			26412	6603	17776	17786	30137	30137					0.08312395388566074
LELEPPLVLP	10	Unmodified	_LELEPPLVLP_					0	0	0			REV__ENST00000558381.1_1_14:24648738-24648993:+|nuORF	REV__ENST00000558381.1_1_14:24648738-24648993:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3382568359375	2	560.336633	1118.65871	3.1454	0.0017625	3.4672	0.0019428	6.6126	0.0037053	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.86452	1	13178	13178		30.504	1.3541	1	151040	+		26413	17229	17777	17787	30138	30138					0.10412926485469143
LELEQQQSA	9	Unmodified	_LELEQQQSA_					0	0	0		ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;ENST00000490135.6_1_6:152637953-152655276:-|nuORF	ENSG00000131018|ENST00000367255|SYNE1	ENSG00000131018|ENST00000367255|SYNE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.303466796875	2	523.261653	1044.50875	1.6336	0.00085481	4.0719	0.0021306	5.7055	0.0029855	523.2633443228087	88.514	0.23325	88.44	88.319	88.552	-0.074005					8	5	2	0	0	0	0.20789	1	9208	9208		34.173	8.7224	1	58255			26414	3707	17778	17788	30139	30139					-0.011720455242766548
LELEQVCEP	9	Unmodified	_LELEQVCEP_					0	0	0			REV__ENSG00000178971|ENST00000651323|CTC1	REV__ENSG00000178971|ENST00000651323|CTC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8203735351562	2	530.254982	1058.49541	0.36764	0.00019494	-3.464	-0.0018368	-3.0964	-0.0016419	530.2530751137014	79.853	0.71927	80.269	79.997	80.716	0.41621					36	16	3	0	0	0	0.20789	1	9119	9119		58.782	12.83	1	294990	+		26415	22304	17779	17789	30140	30140					-0.031496196279022115
LELFFILVI	9	Unmodified	_LELFFILVI_					0	0	0			REV__nc|ENSG00000108219|Q8NG11-2|TSPAN14	REV__nc|ENSG00000108219|Q8NG11-2|TSPAN14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.82958984375	2	553.846636	1105.67872	1.979	0.0010961	0.87092	0.00048235	2.8499	0.0015784	553.8464428630982	90.407	0.51038	90.337	90.09	90.6	-0.069977					16	11	2	0	0	0	0.20789	1	9443	9443		18.324	0	1	42281	+		26416	17699	17780	17790	30141	30141					0.13010722216085924
LELFGIFQFIL	11	Unmodified	_LELFGIFQFIL_					0	0	0		ENST00000517937.1_1_6:56599965-56716690:-|nuORF	ENST00000517937.1_1_6:56599965-56716690:-|nuORF	ENST00000517937.1_1_6:56599965-56716690:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.273681640625	3	447.260197	1338.75876	0.7497	0.00033531	1.4146	0.0006327	2.1643	0.00096801	447.2601037516757	106.84	0.26439	106.93	106.69	106.95	0.091255					10	5	3	0	0	0	0.1767	1	11424	11424		9.2118	3.7989	1	238690			26417	13111	17781	17791	30142	30142					0.10293163819278561
LELFLPPQLKP	11	Unmodified	_LELFLPPQLKP_					0	0	0		ENSG00000171695|ENST00000302096|LKAAEAR1;nc|ENSG00000171695|Q8TD35-2|LKAAEAR1	ENSG00000171695|ENST00000302096|LKAAEAR1	ENSG00000171695|ENST00000302096|LKAAEAR1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.2547302246094	3	432.26383	1293.76966	-1.8338	-0.00079269	3.0555	0.0013208	1.2217	0.00052809	432.26588099211637	113.12	0.20975	113.09	113.01	113.22	-0.032333					16	5	4	0	0	0	0.17368	1	12064	12064		28.577	2.5133	1	1477400			26418	6697	17782	17792	30143	30143					0.13452566193564053
LELFLPPQLKP	11	Unmodified	_LELFLPPQLKP_					0	0	0		ENSG00000171695|ENST00000302096|LKAAEAR1;nc|ENSG00000171695|Q8TD35-2|LKAAEAR1	ENSG00000171695|ENST00000302096|LKAAEAR1	ENSG00000171695|ENST00000302096|LKAAEAR1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	432.26383	1293.76966	2.7181	0.0011749	-2.7427	-0.0011856	-0.024627	-1.0645E-05	432.26352865280955	112.88	1.1467	112.85	112.65	113.79	-0.024818	-0.065073	-0.0020922	NaN	28.577	83	30	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1304300			26419	6697	17782	17792							0.13452566193564053
LELFLPPQLKP	11	Unmodified	_LELFLPPQLKP_					0	0	0		ENSG00000171695|ENST00000302096|LKAAEAR1;nc|ENSG00000171695|Q8TD35-2|LKAAEAR1	ENSG00000171695|ENST00000302096|LKAAEAR1	ENSG00000171695|ENST00000302096|LKAAEAR1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	432.26383	1293.76966	2.4293	0.0010501	-2.0084	-0.00086816	0.42085	0.00018192	432.26354216654454	112.78	3.0411	112.8	112.71	115.75	0.028854	-0.11145	-0.00114	NaN	28.577	121	82	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1721200			26420	6697	17782	17792							0.13452566193564053
LELFSLPQ	8	Unmodified	_LELFSLPQ_					0	0	0			REV__ENST00000437551.5_1_2:113997680-113997956:+|nuORF	REV__ENST00000437551.5_1_2:113997680-113997956:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.7634582519531	2	473.765843	945.517133	-0.295	-0.00013976	-4.0103	-0.0018999	-4.3053	-0.0020397	473.7638393269968	29.315	0.94589	29.225	28.887	29.833	-0.089546					57	21	4	0	0	0	0.53378	1	1838	1838		74.255	1.3758	1	1134800	+		26421	26707	17783	17793	30144	30144					0.04219553183008884
LELGEVPS	8	Unmodified	_LELGEVPS_					0	0	0		chr11:119100827-119101362|35|12.06|0.05|7.99|-|0|DPAGT1,None|1	chr11:119100827-119101362|35|12.06|0.05|7.99|-|0|DPAGT1,None|1	chr11:119100827-119101362|35|12.06|0.05|7.99|-|0|DPAGT1,None|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.9250183105469	2	422.226551	842.438549	-0.16892	-7.1322E-05	3.5494	0.0014986	3.3805	0.0014273	422.227956385583	57.195	2.9314	57.183	56.789	59.721	-0.012199					148	95	3	0	0	0	0.4196	1	5352	5352		40.573	15.122	1	708840			26422	93	17784	17794	30145	30145					0.011027008779137759
LELGIIAYIIV	11	Unmodified	_LELGIIAYIIV_					0	0	0			REV__ENSG00000081248|ENST00000362061|CACNA1S	REV__ENSG00000081248|ENST00000362061|CACNA1S	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25665283203125	3	406.256564	1215.74786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.82	1	55.784	55.284	56.284	-0.036827								0	0	0	0.56276	1	4695	4695		14.086	0	1		+		26423	16822	17785	17795	30146	30146					0.14861761444990407
LELGNRRS	8	Unmodified	_LELGNRRS_					0	0	0			REV__ENST00000440943.5_1_1:52275958-52276015:-|nuORF	REV__ENST00000440943.5_1_1:52275958-52276015:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7663879394531	2	472.76724	943.519927	-1.1355	-0.00053681	1.1341	0.00053614	-0.0014011	-6.6241E-07	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.87922	1	7791	7791		31.955	7.7521	1	292450	+		26424	26746	17786	17796	30147	30147					0.04590821360523023
LELIELRE	8	Unmodified	_LELIELRE_					0	0	0		ENST00000379752.5_1_1:157030233-157030518:-|nuORF;ENSG00000122692|ENST00000397149|SMU1	ENST00000379752.5_1_1:157030233-157030518:-|nuORF;ENSG00000122692|ENST00000397149|SMU1	ENSG00000122692|ENST00000397149|SMU1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.7960205078125	2	507.795132	1013.57571	0.23267	0.00011815	-0.46143	-0.00023431	-0.22876	-0.00011616	507.7945361012725	60.144	0.94435	60.697	60.16	61.104	0.55323					47	25	3	0	0	0	0.93293	1	6422	6422		51.335	1.8939	1	529790			26425	3240;10902	17787	17797	30148	30148					0.06946609757483202
LELITKPL	8	Unmodified	_LELITKPL_					0	0	0		ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.801025390625	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.81548	1	2918	2918		20.482	0	1	1091400			26426	5781	17788	17798	30149	30149					0.11905003113804469
LELKKDKKHSK	11	Unmodified	_LELKKDKKHSK_					0	0	0		ENSG00000183035|ENST00000329312|CYLC1	ENSG00000183035|ENST00000329312|CYLC1	ENSG00000183035|ENST00000329312|CYLC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.94384765625	3	451.945271	1352.81398	-1.6541	-0.00074756	-2.5453	-0.0011503	-4.1994	-0.0018979	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.76892	1	4777	4777		17.833	3.0543	1	430100			26427	7496	17789	17799	30150	30150					0.15168970339732368
LELKKERRV	9	Unmodified	_LELKKERRV_					0	0	0		nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;ENST00000471736.5_1_4:158142110-158255356:+|nuORF	nc|ENSG00000120251|P42262-4|GRIA2	nc|ENSG00000120251|P42262-4|GRIA2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.866455078125	2	585.869497	1169.72444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.556	1	26.38	25.88	26.88	-0.17559								0	0	0	0.3041	1	1463	1463		29.17	0.020503	1				26428	14873	17790	17800	30151	30151					0.1463676045102602
LELKLQLLLAA	11	Unmodified	_LELKLQLLLAA_					0	0	0			REV__nc|ENSG00000073150|Q96RD6-1|PANX2	REV__nc|ENSG00000073150|Q96RD6-1|PANX2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	409.2710876464844	3	408.935713	1223.78531	-2.1639	-0.0008849	-1.8331	-0.00074961	-3.997	-0.0016345	408.9349432622171	16.275	0.36548	16.275	16.165	16.53	0					22	17	2	0	0	0	0.78391	1	115	115		14.694	1.1857	1	71454	+		26429	16668	17791	17801	30152	30152					0.18236852710651874
LELKLSLP	8	Unmodified	_LELKLSLP_					0	0	0		ENST00000566895.5_1_15:89821926-89825160:+|nuORF	ENST00000566895.5_1_15:89821926-89825160:+|nuORF	ENST00000566895.5_1_15:89821926-89825160:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79229736328125	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.804	1	49.801	49.301	50.301	-0.0030327								0	0	0	0.30004	1	4185	4185		21.702	0	1				26430	13942	17792	17802	30153	30153					0.10984716596760791
LELKLSLP	8	Unmodified	_LELKLSLP_					0	0	0		ENST00000566895.5_1_15:89821926-89825160:+|nuORF	ENST00000566895.5_1_15:89821926-89825160:+|nuORF	ENST00000566895.5_1_15:89821926-89825160:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7917175292969	2	456.791861	911.569169	-0.73784	-0.00033704	3.4705	0.0015853	2.7326	0.0012482	456.79333098184276	49.768	2.9671	49.744	48.401	51.368	-0.024029					154	74	4	0	0	0	0.884	1	4287	4287		33.516	0	1	161210			26431	13942	17792	17802	30154	30154					0.10984716596760791
LELKLSLP	8	Unmodified	_LELKLSLP_					0	0	0		ENST00000566895.5_1_15:89821926-89825160:+|nuORF	ENST00000566895.5_1_15:89821926-89825160:+|nuORF	ENST00000566895.5_1_15:89821926-89825160:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7904052734375	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.846	1	49.874	49.374	50.374	0.028328								0	0	0	0.29694	1	3881	3881		37.028	0	1				26432	13942	17792	17802	30155	30155					0.10984716596760791
LELKRQIGEE	10	Unmodified	_LELKRQIGEE_					0	0	0		ENST00000400566.5_1_21:15858129-15858360:-|nuORF	ENST00000400566.5_1_21:15858129-15858360:-|nuORF	ENST00000400566.5_1_21:15858129-15858360:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5639343261719	3	405.562827	1213.66665	0.36519	0.00014811	4.3958	0.0017828	4.761	0.0019309	405.56448085156467	59.925	1.6913	60.042	59.092	60.783	0.11676					133	55	3	0	0	0	0.86587	1	5106	5106		21.78	2.1535	1	327870			26433	11226	17793	17803	30156	30156					0.06836453734968018
LELLFPFF	8	Unmodified	_LELLFPFF_					0	0	0			REV__ENST00000512600.1_1_5:112929111-112929213:+|nuORF	REV__ENST00000512600.1_1_5:112929111-112929213:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.293212890625	2	513.288954	1024.56336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.173	1	16.149	15.649	16.649	-0.024035								0	0	0	0.30004	1	119	119		21.702	1.7056	1		+		26434	27981	17794	17804	30157	30157					0.0520561808509683
LELLGMLVAS	10	Unmodified	_LELLGMLVAS_					0	0	0			REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.301736	1044.58892	1.0264	0.00053713	2.344	0.0012266	3.3704	0.0017638	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.74274	1	8726	8726		42.396	1.618	1	3817300	+		26435	17010	17795	17805	30158	30158					0.06840724545213561
LELLLPIRYR	10	Unmodified	_LELLLPIRYR_					0	0	0		ENSG00000075234|ENST00000381031|TTC38	ENSG00000075234|ENST00000381031|TTC38	ENSG00000075234|ENST00000381031|TTC38	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.406494140625	2	643.403173	1284.79179	1.6039	0.001032	2.8597	0.0018399	4.4636	0.0028719	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.85934	1	11494	11494		35.618	6.4482	1	21138000			26436	1325	17796	17806	30159	30159					0.16078790661981657
LELLPDSG	8	Unmodified	_LELLPDSG_					0	0	0			REV__ENSG00000177354|ENST00000374144|C10orf71	REV__ENSG00000177354|ENST00000374144|C10orf71	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2273254394531	2	422.226551	842.438549	-0.93887	-0.00039642	3.7277	0.001574	2.7889	0.0011775	422.2280284167546	61.398	1.0667	61.414	61.239	62.306	0.015724					73	47	2	0	0	0	0.87922	1	5368	5368		31.955	5.1588	1	807210	+		26437	22197	17797	17807	30160	30160					0.011027008779137759
LELLPITT	8	Unmodified	_LELLPITT_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2743835449219	2	450.276044	898.537535	-1.1013	-0.00049589	-2.4615	-0.0011084	-3.5628	-0.0016043	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.884	1	9365	9365		33.516	3.674	1	26247000			26438	961	17798	17808	30161	30161					0.08420723842789357
LELLPITT	8	Unmodified	_LELLPITT_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2742919921875	2	450.276044	898.537535	-2.0152	-0.00090741	-1.7134	-0.00077152	-3.7287	-0.0016789	450.27520319932955	39.382	0.90055	39.75	39.687	40.587	0.36797					38	21	2	0	0	0	0.89962	1	3298	3298		38.806	0	1	822370			26439	961	17798	17808	30162	30162					0.08420723842789357
LELLPITT	8	Unmodified	_LELLPITT_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2746276855469	2	450.276044	898.537535	0.49618	0.00022342	-3.75	-0.0016885	-3.2538	-0.0014651	450.2742908789494	92.742	1.9986	93.189	92.476	94.475	0.44661					184	49	6	0	0	0	0.884	2	11163	11163;11174		40.573	7.057	1	16577000			26440	961	17798	17808	30163;30164	30163					0.08420723842789357
LELLQALL	8	Unmodified	_LELLQALL_					0	0	0			REV__ENST00000440850.5_1_3:195704061-195712605:-|nuORF	REV__ENST00000440850.5_1_3:195704061-195712605:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.58953857421875	2	456.791861	911.569169	-0.78642	-0.00035923	3.3965	0.0015515	2.6101	0.0011923	456.79322773367255	47.731	2.3822	48.654	47.607	49.989	0.92315					71	58	2	0	0	0	0.4196	1	4468	4468		19.36	0	1	239090	+		26441	26744	17799	17809	30165	30165					0.10984716596760791
LELLRHMV	8	Unmodified	_LELLRHMV_					0	0	0		ENST00000484203.5_1_2:86348636-86354493:+|nuORF;ENSG00000132300|ENST00000254630|PTCD3	ENST00000484203.5_1_2:86348636-86354493:+|nuORF	ENST00000484203.5_1_2:86348636-86354493:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.2098693847656	2	505.794412	1009.57427	-0.41959	-0.00021223	-1.7242	-0.00087211	-2.1438	-0.0010843	505.79344666118794	81.289	0.85332	81.711	81.144	81.997	0.4215					31	20	2	0	0	0	0.4196	1	9312	9312		20.482	4.84	1	119090			26442	3777	17800	17810	30166	30166					0.06986697187733171
LELLRHMV	8	Unmodified	_LELLRHMV_					0	0	0		ENST00000484203.5_1_2:86348636-86354493:+|nuORF;ENSG00000132300|ENST00000254630|PTCD3	ENST00000484203.5_1_2:86348636-86354493:+|nuORF	ENST00000484203.5_1_2:86348636-86354493:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	505.794412	1009.57427	-1.0025	-0.00050707	-1.7637	-0.00089205	-2.7662	-0.0013991	506.29492333567816	81.483	0.12289	81.483	81.369	81.492	0	-0.11421	0.00051498	NaN	20.482	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16824			26443	3777	17800	17810							0.06986697187733171
LELLRTAFSA	10	Unmodified	_LELLRTAFSA_					0	0	0			REV__ENSG00000100156|ENST00000681075|SLC16A8	REV__ENSG00000100156|ENST00000681075|SLC16A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8201904296875	2	560.821681	1119.62881	-1.4169	-0.00079462	-1.874	-0.001051	-3.2909	-0.0018456	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.8608	1	9330	9330		34.173	6.0911	1	758020	+		26444	17145	17801	17811	30167	30167					0.07377987540144204
LELLSSPA	8	Unmodified	_LELLSSPA_					0	0	0		ENST00000288840.9_1_15:66995311-66995530:+|nuORF	ENST00000288840.9_1_15:66995311-66995530:+|nuORF	ENST00000288840.9_1_15:66995311-66995530:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.2279357910156	2	415.236919	828.459284	-0.33851	-0.00014056	1.3212	0.00054863	0.98273	0.00040807	415.23737933519647	38.327	1.2691	38.849	38.357	39.626	0.52235					46	30	2	0	0	0	0.4196	1	3227	3227		18.324	0	1	525570			26445	9666	17802	17812	30168	30168					0.03819291257570967
LELMDIIAE	9	Unmodified	_LELMDIIAE_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2598876953125	2	523.775551	1045.53655	-0.10827	-5.6709E-05	2.8701	0.0015033	2.7618	0.0014466	523.7768767176983	44.853	0.52919	45.316	45.025	45.554	0.46313					27	12	3	0	0	0	0.20789	1	4103	4103		29.15	3.6994	1	1486900			26446	4393	17803	17813	30169	30169					0.015601414115963053
LELPKKLSIPW	11	Unmodified	_LELPKKLSIPW_					0	0	0			REV__nc|ENSG00000204179|Q4JDL3-6|PTPN20	REV__nc|ENSG00000204179|Q4JDL3-6|PTPN20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9395446777344	3	441.939346	1322.79621	-0.67662	-0.00029902	1.5818	0.00069906	0.90519	0.00040004	441.93996604387434	56.404	1.0058	56.378	55.754	56.759	-0.026108					84	47	2	0	0	0	0.76087	1	4734	4734		19.627	4.8481	1	784320	+		26447	23468	17804	17814	30170	30170					0.1477225508488118
LELPKVIPVPF	11	Unmodified	_LELPKVIPVPF_					0	0	0		ENST00000337339.6_1_X:11785039-11785279:+|nuORF	ENST00000337339.6_1_X:11785039-11785279:+|nuORF	ENST00000337339.6_1_X:11785039-11785279:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.8269653320312	2	626.389199	1250.76385	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.726	1	57.726	57.226	58.226	0								0	0	0	0.56276	1	4976	4976		37.812	9.9293	1				26448	10189	17805	17815	30171	30171					0.1484946768187001
LELPVDTG	8	Unmodified	_LELPVDTG_					0	0	0			REV__ENST00000372264.3_1_9:134165160-134165370:+|nuORF	REV__ENST00000372264.3_1_9:134165160-134165370:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2281494140625	2	422.226551	842.438549	0.33102	0.00013977	3.0407	0.0012839	3.3717	0.0014236	422.227740126127	56.228	1.0937	56.328	55.393	56.487	0.09919					79	43	2	0	0	0	0.84341	1	4729	4729		24.203	2.2429	1	846200	+		26449	25713	17806	17816	30172	30172					0.011027008779024072
LELQPSLI	8	Unmodified	_LELQPSLI_					0	0	0		ENSG00000112773|ENST00000320172|TENT5A;nc|ENSG00000112773|Q96IP4-2|TENT5A	ENSG00000112773|ENST00000320172|TENT5A	ENSG00000112773|ENST00000320172|TENT5A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2896728515625	2	456.773668	911.532783	-0.89017	-0.00040661	-2.3872	-0.0010904	-3.2774	-0.001497	456.772519634116	87.085	0.82539	87.54	87.184	88.009	0.45429					26	19	2	0	0	0	0.4196	1	10273	10273		25.45	0	1	90097			26450	2680	17807	17817	30173	30173					0.07347839700048553
LELQPSLI	8	Unmodified	_LELQPSLI_					0	0	0		ENSG00000112773|ENST00000320172|TENT5A;nc|ENSG00000112773|Q96IP4-2|TENT5A	ENSG00000112773|ENST00000320172|TENT5A	ENSG00000112773|ENST00000320172|TENT5A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	456.773668	911.532783	-1.1633	-0.00053138	-1.9446	-0.00088825	-3.1079	-0.0014196	456.7728302265722	87.165	1.203	87.359	86.891	88.094	0.19379	-0.09021	8.1258E-05	NaN	40.573	35	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104650			26451	2680	17807	17817							0.07347839700048553
LELRPKYN	8	Unmodified	_LELRPKYN_					0	0	0		ENSG00000164933|ENST00000297578|SLC25A32	ENSG00000164933|ENST00000297578|SLC25A32	ENSG00000164933|ENST00000297578|SLC25A32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7938232421875	2	516.795466	1031.57638	-0.047501	-2.4548E-05	-3.81	-0.001969	-3.8575	-0.0019935	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.86791	1	9019	9019		28.254	1.4582	1	692890			26452	6025	17808	17818	30174	30174					0.06185449197187154
LELRRKAPPGG	11	Unmodified	_LELRRKAPPGG_					0	0	0			REV__ENSG00000112242|ENST00000346618|E2F3	REV__ENSG00000112242|ENST00000346618|E2F3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.3585815429688	2	597.359296	1192.70404	0.89294	0.00053341	-2.814	-0.001681	-1.921	-0.0011475	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.7144	1	10484	10484		29.17	0.59333	1	2674200	+		26453	17932	17809	17819	30175	30175					0.11539589791209437
LELSAELIG	9	Unmodified	_LELSAELIG_					0	0	0			REV__ENSG00000187688|ENST00000338560|TRPV2	REV__ENSG00000187688|ENST00000338560|TRPV2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7672119140625	2	472.768583	943.522613	-0.93003	-0.00043969	-1.9892	-0.00094042	-2.9192	-0.0013801	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.72402	1	8077	8077		38.806	3.6054	1	526610	+		26454	22932	17810	17820	30176	30176					0.048592319748081536
LELSIPASA	9	Unmodified	_LELSIPASA_					0	0	0		ENSG00000172037|ENST00000305544|LAMB2	ENSG00000172037|ENST00000305544|LAMB2	ENSG00000172037|ENST00000305544|LAMB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.75439453125	2	450.755475	899.496398	0.64847	0.0002923	-3.528	-0.0015903	-2.8795	-0.001298	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.74721	1	7844	7844		37.159	1.5408	1	162850			26455	6737	17811	17821	30177	30177					0.0426296280331826
LELSLHAQESQ	11	Unmodified	_LELSLHAQESQ_					0	0	0			REV__ENST00000520874.1_1_8:108995475-108995910:+|nuORF	REV__ENST00000520874.1_1_8:108995475-108995910:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.854736328125	2	627.819867	1253.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.832	1	15.342	14.842	15.842	-0.48917								0	0	0	0.56276	1	53	53		21.686	0	1		+		26456	20124	17812	17822	30178	30178					0.008512729756148474
LELSRPPKAS	10	Unmodified	_LELSRPPKAS_					0	0	0		ENST00000591505.1_1_18:32834161-32837899:+|nuORF	ENST00000591505.1_1_18:32834161-32837899:+|nuORF	ENST00000591505.1_1_18:32834161-32837899:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3172607421875	2	549.319306	1096.62406	0.23279	0.00012788	-3.323	-0.0018254	-3.0902	-0.0016975	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.86587	1	10538	10538		29.17	2.4771	1	3004300			26457	14274	17813	17823	30179	30179					0.0796110339738334
LELSRRKAE	9	Unmodified	_LELSRRKAE_					0	0	0			REV__ENST00000447933.5_1_7:156265258-156398034:-|nuORF	REV__ENST00000447933.5_1_7:156265258-156398034:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.3201904296875	2	551.32238	1100.63021	-0.22243	-0.00012263	0.7768	0.00042827	0.55437	0.00030564	551.323001796936	34.472	0.64371	34.477	34.152	34.796	0.0046539					25	14	3	0	0	0	0.6204	1	2117	2117		45.972	4.5456	1	69470	+		26458	26829	17814	17824	30180	30180					0.08391621628902612
LELSRRKAE	9	Unmodified	_LELSRRKAE_					0	0	0			REV__ENST00000447933.5_1_7:156265258-156398034:-|nuORF	REV__ENST00000447933.5_1_7:156265258-156398034:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	551.32238	1100.63021	-0.57748	-0.00031838	0.9648	0.00053191	0.38732	0.00021354	551.32297252947	34.454	0.51962	34.449	34.174	34.693	-0.0047417	-0.02133	0.00028392	NaN	45.972	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56015	+		26459	26829	17814	17824							0.08391621628902612
LELSRRKAE	9	Unmodified	_LELSRRKAE_					0	0	0			REV__ENST00000447933.5_1_7:156265258-156398034:-|nuORF	REV__ENST00000447933.5_1_7:156265258-156398034:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	551.32238	1100.63021	-0.22243	-0.00012263	0.7768	0.00042827	0.55437	0.00030564	551.323001796936	34.472	0.64371	34.477	34.152	34.796	0.0046539	0.0065025	7.6627E-05	NaN	45.972	25	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69470	+		26460	26829	17814	17824							0.08391621628902612
LELSSSPEP	9	Unmodified	_LELSSSPEP_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2975158691406	2	479.740022	957.465492	-0.17292	-8.2957E-05	0.54869	0.00026323	0.37577	0.00018027	479.74007633826545	57.177	0.59947	57.732	57.479	58.078	0.55513					31	14	3	0	0	0	0.20012	1	5995	5995		71.296	21.854	1	475050			26461	7954	17815	17825	30181	30181					-0.014942353015612753
LELSVPAD	8	Unmodified	_LELSVPAD_					0	0	0		ENST00000493216.1_1_22:20939554-20940988:+|nuORF;ENST00000473244.5_1_22:20936789-20940988:+|nuORF;ENST00000489651.5_1_22:20929276-20940988:+|nuORF;nc|ENSG00000099917|Q96RN5-3|MED15;ENST00000492381.5_1_22:20909161-20940988:+|nuORF;nc|ENSG00000099917|Q96RN5-2|MED15;ENSG00000099917|ENST00000263205|MED15	ENST00000493216.1_1_22:20939554-20940988:+|nuORF	ENST00000493216.1_1_22:20939554-20940988:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.22747802734375	2	422.226551	842.438549	-0.18819	-7.946E-05	2.9504	0.0012457	2.7622	0.0011663	422.22774658617425	61.684	0.88657	61.675	61.564	62.45	-0.0094147					63	38	2	0	0	0	0.884	1	5752	5752		33.516	1.9367	1	445730			26462	12720	17816	17826	30182	30182					0.011027008779024072
LELTGDLAL	9	Unmodified	_LELTGDLAL_					0	0	0		ENST00000597953.1_1_3:142719968-142720172:-|nuORF	ENST00000597953.1_1_3:142719968-142720172:-|nuORF	ENST00000597953.1_1_3:142719968-142720172:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7660217285156	2	472.768583	943.522613	0.62555	0.00029574	-3.4442	-0.0016283	-2.8187	-0.0013326	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.69914	1	7982	7982		40.573	0	1	508030			26463	14365	17817	17827	30183	30183					0.04859231974796785
LELTKGLLPL	10	Unmodified	_LELTKGLLPL_					0	0	0		ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.71337890625	2	548.85245	1095.69035	-0.30015	-0.00016474	1.6821	0.00092321	1.3819	0.00075847	548.853314137916	44.684	0.74445	44.65	44.226	44.971	-0.033474					20	16	2	0	0	0	0.37624	1	3530	3530		10.265	0	1	57433			26464	7074	17818	17828	30184	30184					0.14632919239443254
LELTKREV	8	Unmodified	_LELTKREV_					0	0	0		nc|ENSG00000102763|A3KMH1-2|VWA8;nc|ENSG00000102763|A3KMH1-3|VWA8;ENSG00000102763|ENST00000379310|VWA8	nc|ENSG00000102763|A3KMH1-2|VWA8	nc|ENSG00000102763|A3KMH1-2|VWA8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.2370910644531	2	494.295299	986.576045	-1.0016	-0.00049509	0.028471	1.4073E-05	-0.97314	-0.00048102	494.2954686707883	22.165	0.22914	22.108	21.962	22.191	-0.057203					14	9	2	0	0	0	0.4196	1	664	664		38.806	0	1	27477			26465	2016	17819	17829	30185	30185					0.08222029477337855
LELTPVVA	8	Unmodified	_LELTPVVA_					0	0	0			REV__ENST00000502598.5_1_5:176830231-176830399:+|nuORF	REV__ENST00000502598.5_1_5:176830231-176830399:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.25439453125	2	421.255111	840.49567	-1.2322	-0.00051907	-1.5244	-0.00064217	-2.7566	-0.0011612	421.25432904467385	84.477	1.3086	84.477	83.963	85.271	0					69	29	3	0	0	0	0.86791	1	7946	7946		28.254	6.2944	1	450410	+		26466	27825	17820	17830	30186	30186					0.06904168154289891
LELTPVVALP	10	Unmodified	_LELTPVVALP_					0	0	0			REV__ENST00000502598.5_1_5:176830231-176830399:+|nuORF	REV__ENST00000502598.5_1_5:176830231-176830399:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.324951171875	2	526.323525	1050.6325	-0.67072	-0.00035302	3.1177	0.0016409	2.447	0.0012879	526.3250687277414	64.714	3.1276	64.752	62.47	65.598	0.037849					207	130	2	0	0	0	0.84112	1	5593	5593		37.159	1.5408	1	198930	+		26467	27825	17821	17831	30187	30187					0.10920657313999982
LELVEKLAVPT	11	Unmodified	_LELVEKLAVPT_					0	0	0			REV__nc|ENSG00000107731|Q8IZJ1-2|UNC5B	REV__nc|ENSG00000107731|Q8IZJ1-2|UNC5B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.7887573242188	2	606.365921	1210.71729	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.661	1	72.621	72.121	73.121	-0.04039								0	0	0	0.56276	1	7105	7105		30.318	6.795	1		+		26468	17671	17822	17832	30188	30188					0.12035983059945465
LELVLFLCL	9	Unmodified	_LELVLFLCL_					0	0	0			REV__ENST00000581166.5_1_17:56423483-56423582:-|nuORF	REV__ENST00000581166.5_1_17:56423483-56423582:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.816650390625	2	531.817021	1061.61949	0.70533	0.00037511	-1.0774	-0.00057299	-0.37209	-0.00019788	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.72402	1	8459	8459		38.806	5.9937	1	1163300	+		26469	29045	17823	17833	30189	30189					0.09114502930242452
LELVLLGLG	9	Unmodified	_LELVLLGLG_					0	0	0		ENSG00000176402|ENST00000312891|GJC3	ENSG00000176402|ENST00000312891|GJC3	ENSG00000176402|ENST00000312891|GJC3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80035400390625	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3032	3032		12.959	0.75233	1	890090			26470	7078	17824	17834	30190	30190					0.11905003113815837
LELVLLGLG	9	Unmodified	_LELVLLGLG_					0	0	0		ENSG00000176402|ENST00000312891|GJC3	ENSG00000176402|ENST00000312891|GJC3	ENSG00000176402|ENST00000312891|GJC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.800537109375	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.7932	1	3178	3178		13.775	0	1	1091400			26471	7078	17824	17834	30191	30191					0.11905003113815837
LELVLLVQ	8	Unmodified	_LELVLLVQ_					0	0	0			REV__ENST00000526210.1_1_11:62402291-62407104:-|nuORF	REV__ENST00000526210.1_1_11:62402291-62407104:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8008117675781	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.85277	1	3613	3613		25.45	0	1	269820	+		26472	28203	17825	17835	30192	30192					0.11905003113815837
LELVLLVQ	8	Unmodified	_LELVLLVQ_					0	0	0			REV__ENST00000526210.1_1_11:62402291-62407104:-|nuORF	REV__ENST00000526210.1_1_11:62402291-62407104:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8013610839844	2	463.799686	925.584819	-0.22039	-0.00010222	2.8768	0.0013343	2.6564	0.0012321	463.80077563915114	45.485	0.74849	45.417	45.021	45.77	-0.068634					44	18	3	0	0	0	0.84341	1	3307	3307		24.203	0	1	207040	+		26473	28203	17825	17835	30193	30193					0.11905003113815837
LELVLLVQ	8	Unmodified	_LELVLLVQ_					0	0	0			REV__ENST00000526210.1_1_11:62402291-62407104:-|nuORF	REV__ENST00000526210.1_1_11:62402291-62407104:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7989196777344	2	463.799686	925.584819	-1.0055	-0.00046636	2.8419	0.0013181	1.8363	0.00085169	463.8008639126462	44.569	0.72293	45.032	44.662	45.385	0.46313					32	17	2	0	0	0	0.79929	1	4043	4043		18.324	0	1	773120	+		26474	28203	17825	17835	30194	30194					0.11905003113815837
LEMCIERIM	9	Unmodified	_LEMCIERIM_					0	0	0		ENSG00000107554|ENST00000324109|DNMBP;nc|ENSG00000107554|Q6XZF7-2|DNMBP	ENSG00000107554|ENST00000324109|DNMBP	ENSG00000107554|ENST00000324109|DNMBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.2741088867188	2	569.27688	1136.53921	-0.11342	-6.4567E-05	-3.7439	-0.0021313	-3.8573	-0.0021959	569.2748468020036	58.534	0.62846	58.568	58.24	58.869	0.033905					49	21	3	0	0	0	0.76255	1	5384	5384		35.618	2.8059	1	202570			26475	2350	17826	17836	30195	30195					-0.023600497267352694
LEMCLGLP	8	Unmodified	_LEMCLGLP_					0	0	0		ENST00000397412.7_1_16:1664941-1676063:+|nuORF	ENST00000397412.7_1_16:1664941-1676063:+|nuORF	ENST00000397412.7_1_16:1664941-1676063:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2656555175781	2	438.2219	874.429246	0.23118	0.00010131	4.1048	0.0017988	4.336	0.0019001	438.2234045969691	24.183	0.5292	23.801	23.533	24.062	-0.38178					25	11	3	0	0	0	0.4196	1	1126	1126		44.531	7.372	1	62171			26476	11146	17827	17837	30196	30196					-0.012991070036150631
LEMCSHFDA	9	Oxidation (M)	_LEM(Oxidation (M))CSHFDA_		LEM(1)CSHFDA		LEM(63)CSHFDA	0	0	1		ENSG00000221823|ENST00000234310|PPP3R1	ENSG00000221823|ENST00000234310|PPP3R1	ENSG00000221823|ENST00000234310|PPP3R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.7098388671875	2	534.709885	1067.40522	-0.059354	-3.1737E-05	-0.5136	-0.00027463	-0.57296	-0.00030636	534.7095237741696	49.076	0.66014	49.052	48.706	49.367	-0.024033					27	14	2	0	0	0	0.31972	1	4190	4190		63.306	10.37	1	166430			26477	8668	17828	17838	30197	30197		152			-0.1257899222796368
LEMELALD	8	Unmodified	_LEMELALD_					0	0	0			REV__ENST00000274242.9_2_5:40830383-40830557:-|nuORF	REV__ENST00000274242.9_2_5:40830383-40830557:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.23602294921875	2	467.233519	932.452484	-0.9513	-0.00044448	0.6866	0.0003208	-0.26469	-0.00012367	467.2337078119893	69.729	1.4716	69.765	69.399	70.87	0.035614					135	74	2	0	0	0	0.9159	1	6746	6746		44.531	2.0566	1	2912300	+		26478	24564	17829	17839	30198	30198					-0.01644389685304759
LEMESLTDSP	10	Unmodified	_LEMESLTDSP_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.2520141601562	2	561.255179	1120.49581	-1.4473	-0.0008123	-3.7921	-0.0021283	-5.2394	-0.0029406	561.2528152870863	30.947	0.47953	30.947	30.72	31.199	0					22	15	2	0	0	0	0.86218	1	1452	1452		32.812	3.6424	1	47641			26479	7798	17830	17840	30199	30199					-0.059622446986850264
LEMIKKKH	8	Unmodified	_LEMIKKKH_					0	0	0		nc|ENSG00000077935|Q8NDV3-2|SMC1B;ENSG00000077935|ENST00000357450|SMC1B	nc|ENSG00000077935|Q8NDV3-2|SMC1B	nc|ENSG00000077935|Q8NDV3-2|SMC1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8087158203125	2	513.810062	1025.60557	0.37872	0.00019459	-2.5289	-0.0012994	-2.1502	-0.0011048	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.91005	1	4229	4229		42.474	14.22	1	971720			26480	1387	17831	17841	30200	30200					0.09379270221802471
LEMKRSYQLF	10	Unmodified	_LEMKRSYQLF_					0	0	0			REV__ENST00000587994.5_1_18:47317962-47318610:-|nuORF	REV__ENST00000587994.5_1_18:47317962-47318610:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.59197998046875	3	438.900674	1313.68019	0.16852	7.3965E-05	-0.6357	-0.00027901	-0.46717	-0.00020504	438.90018886033243	30.695	0.14515	30.72	30.61	30.755	0.025013					5	3	2	0	0	0	0.37624	1	1600	1600		19.263	0.73163	1	4488.9	+		26481	29133	17832	17842	30201	30201					0.03589988242538311
LENEQAFRSAE	11	Unmodified	_LENEQAFRSAE_					0	0	0			REV__ENSG00000167578|ENST00000357052|RAB4B	REV__ENSG00000167578|ENST00000357052|RAB4B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.9219970703125	3	431.873841	1292.59969	0.56335	0.0002433	-0.24909	-0.00010758	0.31426	0.00013572	431.87360766443754	33.632	0.45678	33.801	33.568	34.025	0.16971					30	10	4	0	0	0	0.17302	1	2431	2431		21.032	0	1	691080	+		26482	21397	17833	17843	30202	30202					-0.0349020154678783
LENKIVKPTDS	11	Unmodified	_LENKIVKPTDS_					0	0	0		ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	622.345947265625	2	622.34826	1242.68197	0.8786	0.00054679	-2.9185	-0.0018163	-2.0399	-0.0012695	622.346539275879	95.975	2.7711	96.138	95.071	97.843	0.16317					131	65	3	0	0	0	0.72739	1	9862	9862		27.047	0.98393	1	486240			26483	8422	17834	17844	30203	30203					0.07033320532150356
LENLDDSVF	9	Unmodified	_LENLDDSVF_					0	0	0		ENSG00000188895|ENST00000398532|MSL1;ENST00000580086.1_1_17:38288345-38289363:+|nuORF;ENST00000339569.9_1_17:38287776-38290619:+|nuORF;nc|ENSG00000188895|Q68DK7-3|MSL1;nc|ENSG00000188895|Q68DK7-2|MSL1	ENSG00000188895|ENST00000398532|MSL1	ENSG00000188895|ENST00000398532|MSL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3611450195312	2	526.250754	1050.48696	-0.23303	-0.00012263	-3.3642	-0.0017704	-3.5972	-0.0018931	526.2482900490288	33.368	0.10921	33.414	33.328	33.438	0.045853					6	4	2	0	0	0	0.20789	1	1607	1607		45.952	0	1	36259			26484	7969	17835	17845	30204	30204					-0.03626850272848969
LENLLIAKTY	10	Unmodified	_LENLLIAKTY_					0	0	0		ENST00000463418.5_1_2:158157328-158158798:+|nuORF	ENST00000463418.5_1_2:158157328-158158798:+|nuORF	ENST00000463418.5_1_2:158157328-158158798:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3433837890625	2	589.344989	1176.67542	-1.05	-0.00061881	-2.2542	-0.0013285	-3.3042	-0.0019473	589.3435611680267	91.272	1.3839	91.742	90.644	92.028	0.47068					106	33	4	0	0	0	0.86348	1	10842	10842		31.53	7.0106	1	1967800			26485	12062	17836	17846	30205	30205					0.09415427371436635
LENLNSLQF	9	Unmodified	_LENLNSLQF_					0	0	0		ENST00000362003.9_1_4:760105-760228:+|nuORF	ENST00000362003.9_1_4:760105-760228:+|nuORF	ENST00000362003.9_1_4:760105-760228:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	539.2822265625	2	539.282389	1076.55022	-0.90124	-0.00048602	1.0435	0.00056276	0.1423	7.6738E-05	539.2827714526277	76.319	0.78116	76.319	75.958	76.739	0					54	28	3	0	0	0	0.55097	1	6951	6951		49.442	2.9848	1	191520			26486	10499	17837	17847	30206	30206					0.01501135235048423
LENNEEGQK	9	Unmodified	_LENNEEGQK_					0	0	0		ENST00000609694.5_1_21:46341180-46342894:+|nuORF	ENST00000609694.5_1_21:46341180-46342894:+|nuORF	ENST00000609694.5_1_21:46341180-46342894:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7503662109375	2	530.74891	1059.48327	0.40712	0.00021608	4.3802	0.0023248	4.7873	0.0025409	530.7511872404865	15.701	0.17273	15.103	15.007	15.179	-0.59873					10	6	2	0	0	0	0.51592	1	39	39		51.193	5.2407	1	73754			26487	14488	17838	17848	30207	30207					-0.044095200466927054
LENNEEGQK	9	Unmodified	_LENNEEGQK_					0	0	0		ENST00000609694.5_1_21:46341180-46342894:+|nuORF	ENST00000609694.5_1_21:46341180-46342894:+|nuORF	ENST00000609694.5_1_21:46341180-46342894:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	530.74891	1059.48327	0.22652	0.00012022	5.293	0.0028093	5.5196	0.0029295	530.751635240442	15.607	0.2264	15.527	15.413	15.639	-0.080018	0.12923	0.00053757	NaN	51.193	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40076			26488	14488	17838	17848							-0.044095200466927054
LENNEEGQK	9	Unmodified	_LENNEEGQK_					0	0	0		ENST00000609694.5_1_21:46341180-46342894:+|nuORF	ENST00000609694.5_1_21:46341180-46342894:+|nuORF	ENST00000609694.5_1_21:46341180-46342894:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	530.74891	1059.48327	-0.19129	-0.00010153	6.0427	0.0032071	5.8514	0.0031056	530.7523210355645	15.314	0.1596	15.363	15.245	15.404	0.04908	-0.035359	0.0013333	NaN	51.193	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31629			26489	14488	17838	17848							-0.044095200466927054
LENNEEGQK	9	Unmodified	_LENNEEGQK_					0	0	0		ENST00000609694.5_1_21:46341180-46342894:+|nuORF	ENST00000609694.5_1_21:46341180-46342894:+|nuORF	ENST00000609694.5_1_21:46341180-46342894:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	530.74891	1059.48327	0.11126	5.9052E-05	5.268	0.002796	5.3792	0.002855	530.7517264541467	15.497	0.18205	15.555	15.437	15.619	0.057872	0.15658	0.00051094	NaN	51.193	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53170			26490	14488	17838	17848							-0.044095200466927054
LENNYLVSAT	10	Unmodified	_LENNYLVSAT_					0	0	0		ENST00000505896.5_1_5:49695109-49707239:-|nuORF;nc|ENSG00000170571|Q6PCB8-2|EMB;ENSG00000170571|ENST00000303221|EMB	ENST00000505896.5_1_5:49695109-49707239:-|nuORF	ENST00000505896.5_1_5:49695109-49707239:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	562.7733764648438	2	562.285128	1122.5557	0.11873	6.676E-05	-0.27092	-0.00015233	-0.15219	-8.5573E-05	562.284938392811	63.92	0.68483	63.886	63.652	64.337	-0.034256					26	19	2	0	0	0	0.37624	1	6066	6066		39.253	0	1	110610			26491	6602	17839	17849	30208	30208					-0.0006718597314829822
LENQKGTVY	9	Unmodified	_LENQKGTVY_					0	0	0			REV__nc|ENSG00000186265|Q7Z6A9-2|BTLA	REV__nc|ENSG00000186265|Q7Z6A9-2|BTLA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2743530273438	2	526.274564	1050.53457	0.76856	0.00040447	-0.87035	-0.00045804	-0.10179	-5.357E-05	526.2739756029589	55.537	0.74533	55.938	55.614	56.359	0.40101					39	17	3	0	0	0	0.51307	1	5694	5694		51.335	0	1	1585300	+		26492	30106	17840	17850	30209	30209					0.011328487180207958
LENQMAKLIQI	11	Unmodified	_LENQMAKLIQI_					0	0	0		nc|ENSG00000080561|Q9UJV3-2|MID2;ENSG00000080561|ENST00000262843|MID2	nc|ENSG00000080561|Q9UJV3-2|MID2	nc|ENSG00000080561|Q9UJV3-2|MID2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7800598144531	3	434.247962	1299.72206	0.70496	0.00030613	-1.9728	-0.00085667	-1.2678	-0.00055054	434.2470999441323	34.704	1.8699	34.71	34.154	36.024	0.0063934					113	43	4	0	0	0	0.16719	1	2221	2221		53.597	14.883	1	209610			26493	1445	17841	17851	30210	30210					0.08418543931088607
LEPAPVRRDR	10	Unmodified	_LEPAPVRRDR_					0	0	0		ENST00000544307.1_1_12:20725060-20833202:+|nuORF;ENSG00000172572|ENST00000359062|PDE3A	ENST00000544307.1_1_12:20725060-20833202:+|nuORF	ENST00000544307.1_1_12:20725060-20833202:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.8466186523438	2	604.846553	1207.67855	1.0466	0.00063305	-1.6192	-0.00097939	-0.57261	-0.00034634	604.845452875801	96.207	3.1756	96.438	95.308	98.483	0.23103					209	74	4	0	0	0	0.8505	1	9937	9937		19.104	0.84144	1	585990			26494	6777	17842	17852	30211	30211					0.08302115268793386
LEPASSPKI	9	Unmodified	_LEPASSPKI_					0	0	0			REV__ENST00000598969.5_1_19:19021778-19023834:-|nuORF	REV__ENST00000598969.5_1_19:19021778-19023834:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2690734863281	2	471.26875	940.522947	-0.81566	-0.0003844	0.84523	0.00039833	0.029568	1.3935E-05	471.26905540525263	62.415	1.1287	62.803	62.273	63.402	0.388					44	25	2	0	0	0	0.51592	1	6678	6678		51.193	3.5354	1	271510	+		26495	17559	17843	17853	30212	30212					0.0503065169467618
LEPASSPKI	9	Unmodified	_LEPASSPKI_					0	0	0			REV__ENST00000598969.5_1_19:19021778-19023834:-|nuORF	REV__ENST00000598969.5_1_19:19021778-19023834:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	471.26875	940.522947	-0.81566	-0.0003844	0.84523	0.00039833	0.029568	1.3935E-05	471.26905540525263	62.415	1.1287	62.803	62.273	63.402	0.388	-0.035788	1.2818E-05	NaN	51.193	44	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	271510	+		26496	17559	17843	17853							0.0503065169467618
LEPASSPKI	9	Unmodified	_LEPASSPKI_					0	0	0			REV__ENST00000598969.5_1_19:19021778-19023834:-|nuORF	REV__ENST00000598969.5_1_19:19021778-19023834:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	471.26875	940.522947	-0.67951	-0.00032023	0.81032	0.00038188	0.13081	6.1645E-05	471.2690924244201	62.32	1.3408	62.875	62.214	63.555	0.5545	0.035788	-2.0091E-05	NaN	51.193	46	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	256600	+		26497	17559	17843	17853							0.0503065169467618
LEPCFCGEG	9	2 Carbamidomethyl (C)	_LEPC(Carbamidomethyl (C))FC(Carbamidomethyl (C))GEG_	LEPC(1)FC(1)GEG		LEPC(61)FC(61)GEG		0	2	0		ENST00000429694.1_1:144614918-144614957:+|nuORF	ENST00000429694.1_1:144614918-144614957:+|nuORF	ENST00000429694.1_1:144614918-144614957:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	534.70947265625	2	534.709885	1067.40522	0.39016	0.00020862	-0.96539	-0.0005162	-0.57522	-0.00030758	534.7092655413628	49.107	0.74668	49.107	48.705	49.452	0.00016785					27	16	2	0	0	0	0.35373	1	4110	4110		60.972	9.6365	1	209120			26498	11614	17844	17854	30213	30213	149;150				-0.12578992227940944
LEPDSLLG	8	Unmodified	_LEPDSLLG_					0	0	0			REV__ENSG00000174292|ENST00000688331|TNK1;REV__nc|ENSG00000155229|Q96T76-8|MMS19	REV__ENSG00000174292|ENST00000688331|TNK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2284851074219	2	422.226551	842.438549	-0.44634	-0.00018846	3.636	0.0015352	3.1897	0.0013468	422.22798150536835	61.607	1.5233	61.995	61.446	62.969	0.38846					55	38	2	0	0	0	0.884	1	6581	6581		33.516	6.7195	1	252360	+		26499	21983;29945	17845	17855	30214	30214					0.011027008779251446
LEPEIQKLIAR	11	Unmodified	_LEPEIQKLIAR_					0	0	0		nc|ENSG00000141577|Q9UPN4-3|CEP131;ENSG00000141577|ENST00000450824|CEP131;nc|ENSG00000141577|Q9UPN4|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2674865722656	3	437.266122	1308.77654	-0.59734	-0.0002612	4.3837	0.0019168	3.7863	0.0016556	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.76579	1	4336	4336		18.531	4.2878	1	2564600			26500	4515	17846	17856	30215	30215					0.13449879074119053
LEPESGLI	8	Unmodified	_LEPESGLI_					0	0	0			REV__ENSG00000103599|ENST00000335894|IQCH	REV__ENSG00000103599|ENST00000335894|IQCH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.23565673828125	2	429.234376	856.454199	0.39502	0.00016955	2.7535	0.0011819	3.1485	0.0013514	429.2354268655387	63.129	2.3304	63.252	62.677	65.007	0.12252					259	94	5	0	0	0	0.89457	1	5513	5513		37.028	0	1	5976700	+		26501	17424	17847	17857	30216	30216					0.020229873949801913
LEPGPGWLL	9	Unmodified	_LEPGPGWLL_					0	0	0			REV__ENSG00000188305|ENST00000342063|PEAK3	REV__ENSG00000188305|ENST00000342063|PEAK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.777099609375	2	491.273835	980.533118	-0.41025	-0.00020154	-3.7928	-0.0018633	-4.2031	-0.0020649	491.27177465944953	53.462	0.70897	54.076	53.696	54.405	0.61436					38	16	3	0	0	0	0.3636	1	5410	5410		60.294	3.5729	1	812070	+		26502	22992	17848	17858	30217	30217					0.04207259419899856
LEPINKTLTY	10	Unmodified	_LEPINKTLTY_					0	0	0			REV__ENSG00000105675|ENST00000262623|ATP4A	REV__ENSG00000105675|ENST00000262623|ATP4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.332763671875	2	596.334621	1190.65469	0.85589	0.0005104	-3.7538	-0.0022385	-2.8979	-0.0017281	596.3322598839247	96.043	3.1049	96.206	95.311	98.416	0.16316					228	72	4	0	0	0	0.86348	1	9891	9891		31.53	1.2121	1	1469100	+		26503	17561	17849	17859	30218	30218					0.06698836991768076
LEPLAVDS	8	Unmodified	_LEPLAVDS_					0	0	0			REV__nc|ENSG00000160299|O95613-2|PCNT	REV__nc|ENSG00000160299|O95613-2|PCNT	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.224853515625	2	422.226551	842.438549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.223	1	62.252	61.752	62.752	0.029575								0	0	0	0.29452	1	5817	5817		33.516	0	1		+		26504	20712	17850	17860	30219	30219					0.011027008779137759
LEPLLVGT	8	Unmodified	_LEPLLVGT_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.2541198730469	2	421.255111	840.49567	-1.2322	-0.00051907	-1.5244	-0.00064217	-2.7566	-0.0011612	421.25432904467385	84.477	1.3086	84.477	83.963	85.271	0					69	29	3	0	0	0	0.85277	1	7956	7956		25.45	1.2474	1	450410	+		26505	18791	17851	17861	30220	30220					0.0690416815430126
LEPLSIVK	8	Unmodified	_LEPLSIVK_					0	0	0			REV__nc|ENSG00000198732|Q9H4F8|SMOC1	REV__nc|ENSG00000198732|Q9H4F8|SMOC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.273193359375	2	449.784036	897.553519	0.7528	0.0003386	-3.8146	-0.0017157	-3.0618	-0.0013771	449.7823316439449	102.13	1.0044	102.27	101.98	102.98	0.13523					38	24	2	0	0	0	0.4196	1	10736	10736		11.511	4.7755	1	183290	+		26506	23369	17852	17862	30221	30221					0.10064430079705744
LEPLVPAS	8	Unmodified	_LEPLVPAS_					0	0	0			REV__ENSG00000135097|ENST00000257552|MSI1	REV__ENSG00000135097|ENST00000257552|MSI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2367858886719	2	413.239461	824.46437	0.52355	0.00021635	-1.497	-0.00061862	-0.97345	-0.00040227	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.86288	1	6970	6970		26.796	6.3143	1	1692300	+		26507	19193	17853	17863	30222	30222					0.045115951201864846
LEPLVQLKNKN	11	Unmodified	_LEPLVQLKNKN_					0	0	0			REV__ENST00000518140.5_1_5:168199753-168727722:-|nuORF	REV__ENST00000518140.5_1_5:168199753-168727722:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.5976257324219	3	432.594238	1294.76089	4.4309	0.0019168	3.1674	0.0013702	7.5983	0.003287	432.59555881758706	105.87	0.94759	106.05	105.78	106.73	0.18647					87	38	4	0	0	0	0.72374	1	12948	12948		27.644	0.89421	1	830660	+		26508	22666	17854	17864	30223	30223					0.12529592557098113
LEPLWWGC	8	Unmodified	_LEPLWWGC_					0	0	0		ENST00000372870.5_1_9:131103082-131105463:+|nuORF	ENST00000372870.5_1_9:131103082-131105463:+|nuORF	ENST00000372870.5_1_9:131103082-131105463:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29052734375	2	502.238938	1002.46332	-0.59969	-0.00030119	2.8132	0.0014129	2.2135	0.0011117	502.24039784612586	85.145	0.67329	85.585	85.229	85.902	0.43967					22	16	2	0	0	0	0.4196	1	9933	9933		29.842	8.1392	1	173010			26509	10720	17855	17865	30224	30224					-0.03780942520359076
LEPPAEGP	8	Unmodified	_LEPPAEGP_					0	0	0			REV__ENSG00000231925|ENST00000434618|TAPBP	REV__ENSG00000231925|ENST00000434618|TAPBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.2049865722656	2	405.205618	808.396684	-0.18782	-7.6105E-05	-1.9721	-0.00079909	-2.1599	-0.0008752	405.20481127463523	77.736	2.7861	77.788	77.332	80.118	0.052696					165	97	3	0	0	0	0.86288	1	7505	7505		26.796	0	1	140160	+		26510	23766	17856	17866	30225	30225					-0.015178548106177914
LEPPLSTLL	9	Unmodified	_LEPPLSTLL_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7959899902344	2	491.794601	981.574648	-0.71316	-0.00035073	3.1449	0.0015467	2.4318	0.0011959	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.7932	1	3666	3666		24.203	1.1603	1	1219600	+		26511	16084	17857	17867	30226	30226					0.08312395388577443
LEPPLTEIQ	9	Unmodified	_LEPPLTEIQ_					0	0	0			REV__ENST00000492784.1_1_9:131675062-131678647:+|nuORF	REV__ENST00000492784.1_1_9:131675062-131678647:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.3102416992188	2	520.28714	1038.55973	-0.86526	-0.00045019	-2.5506	-0.001327	-3.4158	-0.0017772	520.2855298862243	47.575	0.62213	48.499	47.999	48.622	0.92315					20	15	2	0	0	0	0.20789	1	4567	4567		35.618	1.4457	1	322960	+		26512	27678	17858	17868	30227	30227					0.0419890352056882
LEPPLVAQFS	10	Unmodified	_LEPPLVAQFS_					0	0	0			REV__ENSG00000172986|ENST00000389617|GXYLT2	REV__ENSG00000172986|ENST00000389617|GXYLT2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.7957763671875	2	550.802957	1099.59136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.473	1	15.551	15.051	16.051	0.077959								0	0	0	0.45132	1	31	31		24.519	0	1		+		26513	21875	17859	17869	30228	30228					0.04554896274521525
LEPQGLAQY	9	Unmodified	_LEPQGLAQY_					0	0	0			REV__ENSG00000187862|ENST00000368236|TTC24	REV__ENSG00000187862|ENST00000368236|TTC24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.76397705078125	2	509.763832	1017.51311	-0.4458	-0.00022725	-0.20782	-0.00010594	-0.65361	-0.00033319	509.76378277888307	49.023	0.65126	49.048	48.76	49.411	0.025574					36	15	4	0	0	0	0.74721	1	3769	3769		37.159	1.5408	1	218730	+		26514	22958	17860	17870	30229	30229					0.0050546368928507945
LEPRLLSMKTK	11	Unmodified	_LEPRLLSMKTK_					0	0	0		chr3:186539597-186544306|15|21.2|0.37|5.84|-|1|CRYGS,CRYGS|1	chr3:186539597-186544306|15|21.2|0.37|5.84|-|1|CRYGS,CRYGS|1	chr3:186539597-186544306|15|21.2|0.37|5.84|-|1|CRYGS,CRYGS|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.5854797363281	3	439.263724	1314.76934	0.12183	5.3517E-05	-2.5786	-0.0011327	-2.4567	-0.0010792	439.26260961813114	32.323	0.47003	32.434	32.049	32.519	0.11117					29	23	2	0	0	0	0.17302	1	1484	1484		21.032	2.5012	1	116150			26515	398	17861	17871	30230	30230					0.12454823202051557
LEPRQFPSP	9	Unmodified	_LEPRQFPSP_					0	0	0			REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7868041992188	2	535.785099	1069.55564	0.13474	7.2191E-05	3.6882	0.0019761	3.823	0.0020483	535.7869150542037	77.548	2.4284	77.954	77.388	79.816	0.40531					160	57	4	0	0	0	0.36616	1	8901	8901		60.118	2.307	1	5446200	+		26516	27027	17862	17872	30231	30231					0.023648588175319674
LEPRRWRLSLP	11	Unmodified	_LEPRRWRLSLP_					0	0	0		AluSz_dup14503|chr2:197487268-197487545:+|1.0147473644474077|0.096483463261875|3.39|63.0|3|1|sense	AluSz_dup14503|chr2:197487268-197487545:+|1.0147473644474077|0.096483463261875|3.39|63.0|3|1|sense	AluSz_dup14503|chr2:197487268-197487545:+|1.0147473644474077|0.096483463261875|3.39|63.0|3|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.251708984375	3	474.949127	1421.82555	-0.88832	-0.0004219	-0.68939	-0.00032743	-1.5777	-0.00074933	474.94857691745756	20.465	0.35785	19.836	19.718	20.076	-0.62961					12	7	2	0	0	0	0.17521	1	671	671		22.562	9.0536	1	28223			26517	12	17863	17873	30232	30232					0.13151212153752567
LEPRRWRLSLP	11	Unmodified	_LEPRRWRLSLP_					0	0	0		AluSz_dup14503|chr2:197487268-197487545:+|1.0147473644474077|0.096483463261875|3.39|63.0|3|1|sense	AluSz_dup14503|chr2:197487268-197487545:+|1.0147473644474077|0.096483463261875|3.39|63.0|3|1|sense	AluSz_dup14503|chr2:197487268-197487545:+|1.0147473644474077|0.096483463261875|3.39|63.0|3|1|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	474.949127	1421.82555	0.98329	0.00046701	-3.0668	-0.0014566	-2.0835	-0.00098958	474.94756679191045	20.397	0.41286	19.938	19.687	20.1	-0.4591	0.051173	-0.0015685	NaN	22.562	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35682			26518	12	17863	17873							0.13151212153752567
LEPSPLVG	8	Unmodified	_LEPSPLVG_					0	0	0			REV__ENST00000373451.8_1_6:37448445-37448529:+|nuORF	REV__ENST00000373451.8_1_6:37448445-37448529:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78521728515625	2	406.231636	810.448719	1.6559	0.00067268	-1.2331	-0.00050093	0.42277	0.00017174	406.2309349020285	34.618	0.78609	34.828	34.192	34.978	0.21003					27	18	3	0	0	0	0.4196	1	2497	2497		13.775	1.5685	1	193550	+		26519	25761	17864	17874	30233	30233					0.03591308603154175
LEPTHTNPVTV	11	Unmodified	_LEPTHTNPVTV_					0	0	0		ENST00000357156.6_1_20:33128465-33128741:+|nuORF	ENST00000357156.6_1_20:33128465-33128741:+|nuORF	ENST00000357156.6_1_20:33128465-33128741:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3663940429688	2	604.319502	1206.62445	-0.16927	-0.0001023	-1.1274	-0.00068133	-1.2967	-0.00078362	604.3189942098026	104.81	0.4918	104.81	104.58	105.07	0					19	11	2	0	0	0	0.16675	1	10771	10771		47.96	1.9873	1	85721			26520	10383	17865	17875	30234	30234					0.02940478326536322
LEPTHTNPVTV	11	Unmodified	_LEPTHTNPVTV_					0	0	0		ENST00000357156.6_1_20:33128465-33128741:+|nuORF	ENST00000357156.6_1_20:33128465-33128741:+|nuORF	ENST00000357156.6_1_20:33128465-33128741:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3662109375	2	604.319502	1206.62445	-0.48814	-0.00029499	-3.4399	-0.0020788	-3.9281	-0.0023738	604.316881109195	105.41	0.17467	105.39	105.28	105.46	-0.014809					5	3	2	0	0	0	0.16123	1	11403	11403		45.022	15.873	1	30645			26521	10383	17865	17875	30235	30235					0.02940478326536322
LEPTHTNPVTV	11	Unmodified	_LEPTHTNPVTV_					0	0	0		ENST00000357156.6_1_20:33128465-33128741:+|nuORF	ENST00000357156.6_1_20:33128465-33128741:+|nuORF	ENST00000357156.6_1_20:33128465-33128741:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3662109375	2	604.319502	1206.62445	-1.2752	-0.00077061	-2.4322	-0.0014698	-3.7074	-0.0022405	604.3186600470082	104.47	1.0842	104.56	104.28	105.36	0.093857					38	26	3	0	0	0	0.16675	1	11084	11084		56.434	22.261	1	259580			26522	10383	17865	17875	30236	30236					0.02940478326536322
LEPVQLSVLIP	11	Unmodified	_LEPVQLSVLIP_					0	0	0			REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3662109375	2	604.368464	1206.72238	1.0484	0.00063359	-4.3277	-0.0026155	-3.2793	-0.0019819	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.69995	1	11372	11372		31.53	2.3598	1	105850000	+		26523	20292	17866	17876	30237	30237					0.12728286922560983
LEPVQLSVLIP	11	Unmodified	_LEPVQLSVLIP_					0	0	0			REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.365234375	2	604.368464	1206.72238	-1.2751	-0.00077064	-1.2835	-0.00077571	-2.5586	-0.0015464	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.67778	2	12915	12466;12915		35.152	4.8343	1	3346600	+		26524	20292	17866	17876	30238;30239	30239					0.12728286922560983
LEPYTGLTPE	10	Unmodified	_LEPYTGLTPE_					0	0	0		ENSG00000047617|ENST00000682330|ANO2;nc|ENSG00000047617|Q9NQ90-2|ANO2;nc|ENSG00000047617|Q9NQ90|ANO2	ENSG00000047617|ENST00000682330|ANO2	ENSG00000047617|ENST00000682330|ANO2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3403930664062	2	560.282054	1118.54956	-0.40945	-0.00022941	3.9995	0.0022408	3.59	0.0020114	560.2838350750969	102.45	0.55961	102.45	102.35	102.91	0					17	13	2	0	0	0	0.37624	1	10531	10531		31.53	0	1	127290			26525	964	17867	17877	30240	30240					-0.004977042046448332
LEQAKKFLV	9	Unmodified	_LEQAKKFLV_					0	0	0			REV__nc|ENSG00000284862|Q9UFE4-2|CCDC39	REV__nc|ENSG00000284862|Q9UFE4-2|CCDC39	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3270874023438	2	538.329142	1074.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.48	1	103.6	103.1	104.1	0.12622								0	0	0	0.33576	1	10946	10946		45.972	9.5255	1		+		26526	30281	17868	17878	30241	30241					0.10939479408125408
LEQEARKKQRR	11	Unmodified	_LEQEARKKQRR_					0	0	0		nc|ENSG00000005379|O95153-2|TSPOAP1;ENSG00000005379|ENST00000343736|TSPOAP1;nc|ENSG00000005379|O95153-3|TSPOAP1	nc|ENSG00000005379|O95153-2|TSPOAP1	nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.2832946777344	3	481.283057	1440.82734	-0.81885	-0.0003941	1.7968	0.00086478	0.97797	0.00047068	481.2839595795984	103	2.1104	103	102.28	104.39	0					111	52	3	0	0	0	0.74002	1	10537	10537		24.276	0.89802	1	1092200			26527	682	17869	17879	30242	30242					0.12456221171669313
LEQEQQILKS	10	Unmodified	_LEQEQQILKS_					0	0	0		nc|ENSG00000188820|Q5R3K3-2|CALHM6;ENSG00000188820|ENST00000368605|CALHM6	nc|ENSG00000188820|Q5R3K3-2|CALHM6	nc|ENSG00000188820|Q5R3K3-2|CALHM6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2574157714844	3	405.890832	1214.65067	0.26927	0.00010929	-3.5661	-0.0014474	-3.2968	-0.0013381	406.22234925640976	49.142	0.55513	49.18	48.996	49.551	0.037731					13	12	2	0	0	0	0.37624	1	3826	3826		5.6988	0	1	32014			26528	7963	17870	17880	30243	30243					0.05192747498040262
LEQESKKKN	9	Unmodified	_LEQESKKKN_					0	0	0			REV__ENST00000556254.1_1_14:35579616-35591165:-|nuORF	REV__ENST00000556254.1_1_14:35579616-35591165:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3059692382812	2	552.306395	1102.59824	-0.5921	-0.00032702	0.79388	0.00043846	0.20178	0.00011145	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.76419	1	9043	9043		35.152	0	1	1102700	+		26529	17026	17871	17881	30244	30244					0.051042091551153135
LEQFRRIVF	9	Unmodified	_LEQFRRIVF_					0	0	0		nc|ENSG00000107815|Q96RR1-3|TWNK;nc|ENSG00000107815|Q96RR1-2|TWNK;ENSG00000107815|ENST00000311916|TWNK	nc|ENSG00000107815|Q96RR1-3|TWNK	nc|ENSG00000107815|Q96RR1-3|TWNK	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2466125488281	3	403.236385	1206.68733	-1.9285	-0.00077763	-2.3994	-0.00096753	-4.3279	-0.0017452	403.23535670045703	104.5	0.43147	104.6	104.28	104.71	0.093864					14	10	2	0	0	0	0.20789	1	11014	11014		30.318	3.2704	1	105490			26530	2371	17872	17882	30245	30245					0.09225088905259327
LEQFVSELT	9	Unmodified	_LEQFVSELT_					0	0	0			REV__ENSG00000171951|ENST00000305409|SCG2	REV__ENSG00000171951|ENST00000305409|SCG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.2755737304688	2	533.276772	1064.53899	0.18604	9.9209E-05	-0.48611	-0.00025923	-0.30008	-0.00016002	533.276351057075	51.747	0.50683	52.182	51.906	52.413	0.43505					21	11	2	0	0	0	0.33718	1	5145	5145		62.107	0.41614	1	913750	+		26531	21790	17873	17883	30246	30246					0.009303131409069465
LEQFYKGYIE	10	Unmodified	_LEQFYKGYIE_					0	0	0			REV__ENST00000494976.1_1_2:162016988-162019075:+|nuORF	REV__ENST00000494976.1_1_2:162016988-162019075:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	645.8289184570312	2	645.324254	1288.63395	-0.11967	-7.7226E-05	2.7902	0.0018006	2.6705	0.0017234	645.8277454077747	62.02	0.45327	61.986	61.746	62.2	-0.033173					31	13	3	0	0	0	0.80179	1	5864	5864		39.253	3.6345	1	165510	+		26532	27725	17874	17884	30247	30247					0.0011824661212358478
LEQGGKRAQAL	11	Unmodified	_LEQGGKRAQAL_					0	0	0			REV__nc|ENSG00000260220|A0A096LP49-2|CCDC187	REV__nc|ENSG00000260220|A0A096LP49-2|CCDC187	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	585.8287353515625	2	585.833111	1169.65167	-0.75038	-0.0004396	-4.205	-0.0024634	-4.9553	-0.002903	585.8305676475687	57.715	1.3345	57.701	57.24	58.574	-0.013641					81	46	2	0	0	0	0.66929	1	5217	5217		36.447	0.82846	1	146910	+		26533	23936	17875	17885	30248	30248					0.07363006657624283
LEQGMLIQGG	10	Unmodified	_LEQGMLIQGG_					0	0	0			REV__ENSG00000151952|ENST00000422113|TMEM132D	REV__ENSG00000151952|ENST00000422113|TMEM132D	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035278320312	2	523.270967	1044.52738	-1.5392	-0.00080543	-4.3376	-0.0022697	-5.8768	-0.0030752	523.2681759862543	88.12	0.2443	88.289	88.211	88.455	0.16922					6	5	2	0	0	0	0.37624	1	8703	8703		39.253	25.116	1	29450	+		26534	20280	17876	17886	30249	30249					0.006897928459238756
LEQGPGALA	9	Unmodified	_LEQGPGALA_					0	0	0			REV__ENSG00000073067|ENST00000308919|CYP2W1	REV__ENSG00000073067|ENST00000308919|CYP2W1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.26153564453125	2	428.232168	854.449782	-1.6655	-0.00071321	-0.4779	-0.00020465	-2.1434	-0.00091786	428.23316213052163	90.603	0.27325	90.82	90.71	90.983	0.21737					11	6	3	0	0	0	0.20789	1	9076	9076		53.351	16.323	1	103310	+		26535	16665	17877	17887	30250	30250					0.016735229720438838
LEQGVKKILSD	11	Unmodified	_LEQGVKKILSD_					0	0	0			REV__ENST00000392882.6_1_14:100841823-100841868:-|nuORF	REV__ENST00000392882.6_1_14:100841823-100841868:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.357666015625	2	615.358628	1228.7027	-0.35839	-0.00022054	-1.6201	-0.00099692	-1.9785	-0.0012175	615.3576084899992	104.75	2.3818	104.73	104.28	106.66	-0.014809					147	56	4	0	0	0	0.69248	2	11346	11311;11346		32.751	1.2207	1	1933000	+		26536	26036	17878	17888	30251;30252	30252					0.09749910911796178
LEQGVKKILSD	11	Unmodified	_LEQGVKKILSD_					0	0	0			REV__ENST00000392882.6_1_14:100841823-100841868:-|nuORF	REV__ENST00000392882.6_1_14:100841823-100841868:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	615.35791015625	2	615.358628	1228.7027	0.91539	0.00056329	-2.9528	-0.001817	-2.0374	-0.0012537	615.356833413619	104.5	2.6486	104.62	104.11	106.76	0.11684					178	65	4	0	0	0	0.67778	1	11095	11095		35.152	8.4591	1	3488600	+		26537	26036	17878	17888	30253	30253					0.09749910911796178
LEQIEQQKLRL	11	Unmodified	_LEQIEQQKLRL_					0	0	0		ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295	ENSG00000166004|ENST00000325212|CEP295	ENSG00000166004|ENST00000325212|CEP295	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.6082458496094	3	466.608548	1396.80381	-0.1162	-5.4221E-05	-1.0205	-0.00047616	-1.1367	-0.00053038	466.608028235663	100.63	2.2402	100.66	99.377	101.62	0.031036					154	52	4	0	0	0	0.75457	1	10632	10632		21.032	2.5012	1	499520			26538	6147	17879	17889	30254	30254					0.12128362614498656
LEQIFLRSW	9	Unmodified	_LEQIFLRSW_					0	0	0		ENSG00000196208|ENST00000381486|GREB1	ENSG00000196208|ENST00000381486|GREB1	ENSG00000196208|ENST00000381486|GREB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.3323974609375	2	596.329673	1190.64479	2.639	0.0015737	2.6396	0.001574	5.2785	0.0031477	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.66686	1	10260	10260		42.864	0	1	1305600			26539	8026	17880	17890	30255	30255					0.05709693777043867
LEQISIKGPIR	11	Unmodified	_LEQISIKGPIR_					0	0	0		nc|ENSG00000138759|Q86XX4|FRAS1;ENSG00000138759|ENST00000512123|FRAS1;ENST00000509802.1_1_4:79369241-79371543:+|nuORF	nc|ENSG00000138759|Q86XX4|FRAS1	nc|ENSG00000138759|Q86XX4|FRAS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3779296875	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.70737	3	12305	12305;12379;13035		30.318	5.7985	1	19815000			26540	4327	17881	17891	30256;30257;30258	30256					0.1340560990265658
LEQKLLEREG	10	Unmodified	_LEQKLLEREG_					0	0	0		nc|ENSG00000061337|Q9Y250-5|LZTS1;nc|ENSG00000061337|Q9Y250-4|LZTS1;nc|ENSG00000061337|Q9Y250-3|LZTS1;nc|ENSG00000061337|Q9Y250-2|LZTS1;ENSG00000061337|ENST00000381569|LZTS1	nc|ENSG00000061337|Q9Y250-5|LZTS1	nc|ENSG00000061337|Q9Y250-5|LZTS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.56494140625	3	405.562827	1213.66665	1.3716	0.00055625	3.2979	0.0013375	4.6694	0.0018937	405.5640303977856	59.974	1.644	60.007	59.019	60.663	0.032822					112	41	3	0	0	0	0.86272	1	5528	5528		23.378	0	1	297440			26541	1073	17882	17892	30259	30259					0.06836453734968018
LEQKNKSAK	9	Unmodified	_LEQKNKSAK_					0	0	0			REV__ENSG00000077097|ENST00000264331|TOP2B	REV__ENSG00000077097|ENST00000264331|TOP2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3034057617188	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.75725	1	8869	8869		36.447	0.82846	1	13442000	+		26542	16735	17883	17893	30260	30260					0.07224530363282611
LEQLETWFT	9	Unmodified	_LEQLETWFT_					0	0	0		nc|ENSG00000170581|P52630-4|STAT2;ENSG00000170581|ENST00000314128|STAT2	nc|ENSG00000170581|P52630-4|STAT2	nc|ENSG00000170581|P52630-4|STAT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.7879638671875	2	583.790047	1165.56554	-0.18074	-0.00010551	-2.9525	-0.0017236	-3.1332	-0.0018291	583.7881372408947	68.118	0.63609	68.082	67.798	68.434	-0.036301					59	24	3	0	0	0	0.67345	1	6585	6585		42.396	5.9494	1	436950			26543	6603	17884	17894	30261	30261					-0.010619979677812807
LEQLIVKIH	9	Unmodified	_LEQLIVKIH_					0	0	0		ENSG00000170743|ENST00000318881|SYT9	ENSG00000170743|ENST00000318881|SYT9	ENSG00000170743|ENST00000318881|SYT9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8399047851562	2	546.842416	1091.67028	-0.49529	-0.00027085	-3.9856	-0.0021795	-4.4809	-0.0024504	546.8402497724348	101.28	3.7061	101.28	100.69	104.39	0					228	91	5	0	0	0	0.64922	1	10311	10311		44.117	0	1	22090000			26544	6609	17885	17895	30262	30262					0.12811168299458586
LEQLKQLVPL	10	Unmodified	_LEQLKQLVPL_					0	0	0		ENSG00000123933|ENST00000337190|MXD4;ENST00000513372.5_1_4:2252273-2254467:-|nuORF	ENSG00000123933|ENST00000337190|MXD4	ENSG00000123933|ENST00000337190|MXD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8665771484375	2	590.868631	1179.72271	-0.64254	-0.00037966	-3.2896	-0.0019437	-3.9321	-0.0023234	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.4892	2	11254	11254;11340		56.721	14.325	1	52912000			26545	3295	17886	17896	30263;30264	30263					0.14003706642415636
LEQLKQLVPL	10	Unmodified	_LEQLKQLVPL_					0	0	0		ENSG00000123933|ENST00000337190|MXD4;ENST00000513372.5_1_4:2252273-2254467:-|nuORF	ENSG00000123933|ENST00000337190|MXD4	ENSG00000123933|ENST00000337190|MXD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8666381835938	2	590.868631	1179.72271	-0.76513	-0.00045209	-3.0712	-0.0018147	-3.8363	-0.0022667	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.4892	1	11333	11333		56.721	5.3856	1	54208000			26546	3295	17886	17896	30265	30265					0.14003706642415636
LEQLKQLVPL	10	Unmodified	_LEQLKQLVPL_					0	0	0		ENSG00000123933|ENST00000337190|MXD4;ENST00000513372.5_1_4:2252273-2254467:-|nuORF	ENSG00000123933|ENST00000337190|MXD4	ENSG00000123933|ENST00000337190|MXD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8667602539062	2	590.868631	1179.72271	-1.319	-0.00077937	-2.4341	-0.0014383	-3.7532	-0.0022176	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.64457	4	10836	10836;10848;10965;11100		47.657	6.8792	1	81379000			26547	3295	17886	17896	30266;30267;30268;30269	30266					0.14003706642415636
LEQLLVVMD	9	Unmodified	_LEQLLVVMD_					0	0	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2927856445312	2	530.291368	1058.56818	-0.066725	-3.5384E-05	3.8245	0.0020281	3.7578	0.0019927	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.75725	1	9127	9127		36.447	4.9169	1	2084800			26548	2636	17887	17897	30270	30270					0.041241341655450015
LEQLNARMA	9	Unmodified	_LEQLNARMA_					0	0	0			REV__ENSG00000131043|ENST00000320849|AAR2	REV__ENSG00000131043|ENST00000320849|AAR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.303466796875	2	523.276583	1044.53861	0.71698	0.00037518	0.35186	0.00018412	1.0688	0.0005593	523.275782170777	88.699	0.32835	88.849	88.682	89.01	0.15055					11	7	3	0	0	0	0.20789	1	8833	8833		32.812	7.3622	1	88259	+		26549	18931	17888	17898	30271	30271					0.01812614940081403
LEQLRGKAS	9	Unmodified	_LEQLRGKAS_					0	0	0		ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2903137207031	2	501.290548	1000.56654	-0.97974	-0.00049113	0.89004	0.00044617	-0.089695	-4.4963E-05	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.71772	2	8009	8009;8117		39.253	1.0262	1	2111000			26550	6930	17889	17899	30272;30273	30272					0.06628261191804086
LEQLRGKAS	9	Unmodified	_LEQLRGKAS_					0	0	0		ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2906494140625	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.71772	1	8981	8981		39.253	6.5023	1	9565500			26551	6930	17889	17899	30274	30274					0.06628261191804086
LEQLRGKAS	9	Unmodified	_LEQLRGKAS_					0	0	0		ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2901916503906	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.75725	1	8668	8668		36.447	1.2947	1	2850500			26552	6930	17889	17899	30275	30275					0.06628261191804086
LEQLRGKAS	9	Unmodified	_LEQLRGKAS_					0	0	0		ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2903747558594	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.77696	1	9343	9343		31.53	1.2121	1	9883700			26553	6930	17889	17899	30276	30276					0.06628261191804086
LEQLRGKAS	9	Unmodified	_LEQLRGKAS_					0	0	0		ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2900390625	2	501.290548	1000.56654	-0.52378	-0.00026256	0.16738	8.3908E-05	-0.35639	-0.00017866	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.71772	1	8432	8432		39.253	0.44669	1	2929300			26554	6930	17889	17899	30277	30277					0.06628261191804086
LEQLRGKAS	9	Unmodified	_LEQLRGKAS_					0	0	0		ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904357910156	2	501.290548	1000.56654	-0.36653	-0.00018374	0.15869	7.9552E-05	-0.20784	-0.00010419	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.71772	1	8993	8993		39.253	0	1	9903700			26555	6930	17889	17899	30278	30278					0.06628261191804086
LEQLRGKAS	9	Unmodified	_LEQLRGKAS_					0	0	0		ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.290283203125	2	501.290548	1000.56654	0.65622	0.00032896	-1.0593	-0.000531	-0.40304	-0.00020204	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.64555	1	8308	8308		44.377	5.1244	1	2931000			26556	6930	17889	17899	30279	30279					0.06628261191804086
LEQLRGKAS	9	Unmodified	_LEQLRGKAS_					0	0	0		ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29034423828125	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.71772	1	10063	10063		39.253	0	1	9038000			26557	6930	17889	17899	30280	30280					0.06628261191804086
LEQLRKRRRE	10	Unmodified	_LEQLRKRRRE_					0	0	0			REV__nc|ENSG00000090889|O95239-2|KIF4A	REV__nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.94873046875	3	461.947898	1382.82186	-1.7389	-0.00080328	2.6397	0.0012194	0.90081	0.00041613	461.9491276210282	107.85	0.72025	107.89	107.25	107.97	0.036125					70	17	5	0	0	0	0.8492	1	11492	11492		18.531	2.0012	1	82858000	+		26558	29725	17890	17900	30281	30281					0.14576542379882085
LEQLSPLL	8	Unmodified	_LEQLSPLL_					0	0	0		nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	nc|ENSG00000080345|Q5UIP0-2|RIF1	nc|ENSG00000080345|Q5UIP0-2|RIF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2636413574219	2	456.773668	911.532783	0.74234	0.00033908	-2.0943	-0.00095663	-1.352	-0.00061755	456.7723836782403	84.491	0.60882	84.42	84.195	84.804	-0.071098					17	13	2	0	0	0	0.4196	1	8610	8610		29.15	10.825	1	25239			26559	1439	17891	17901	30282	30282					0.07347839700048553
LEQNAVEEAM	10	Unmodified	_LEQNAVEEAM_					0	0	0		ENSG00000138002|ENST00000260570|IFT172;nc|ENSG00000138002|Q9UG01-2|IFT172;ENST00000507184.5_1_2:27680991-27709067:-|nuORF	ENSG00000138002|ENST00000260570|IFT172	ENSG00000138002|ENST00000260570|IFT172	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3299560546875	2	567.260796	1132.50704	1.4927	0.00084673	-3.2123	-0.0018222	-1.7196	-0.00097546	567.2589279993388	92.602	0.12932	92.647	92.539	92.668	0.045448					4	2	2	0	0	0	0.37624	1	9683	9683		44.377	3.599	1	28935			26560	4253	17892	17902	30283	30283					-0.05391422604566287
LEQNKKMN	8	Unmodified	_LEQNKKMN_					0	0	0		nc|ENSG00000169641|Q86V48-2|LUZP1;nc|ENSG00000169641|Q86V48-3|LUZP1;ENSG00000169641|ENST00000302291|LUZP1	nc|ENSG00000169641|Q86V48-2|LUZP1	nc|ENSG00000169641|Q86V48-2|LUZP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8139953613281	2	502.763309	1003.51206	2.3467	0.0011798	-2.0821	-0.0010468	0.26463	0.00013305	502.76250734957335	97.624	0.12385	97.569	97.479	97.603	-0.055542					4	2	2	0	0	0	0.4196	1	10511	10511		55.504	11.387	1	27409			26561	6513	17893	17903	30284	30284					0.01044926048734851
LEQPKPHLFL	10	Unmodified	_LEQPKPHLFL_					0	0	0			REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3547973632812	2	611.353148	1220.69174	0.21559	0.0001318	4.4197	0.002702	4.6352	0.0028338	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.80179	1	9917	9917		39.253	4.1008	1	5379900	+		26562	21021	17894	17904	30285	30285					0.09022553328168215
LEQPRVQRLL	10	Unmodified	_LEQPRVQRLL_					0	0	0			REV__nc|ENSG00000137693|P46937-3|YAP1	REV__nc|ENSG00000137693|P46937-3|YAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.9223937988281	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.86899	1	11620	11620		9.6461	0	1	19495000	+		26563	29878	17895	17905	30286	30286					0.13056145479754377
LEQPRVQRLL	10	Unmodified	_LEQPRVQRLL_					0	0	0			REV__nc|ENSG00000137693|P46937-3|YAP1	REV__nc|ENSG00000137693|P46937-3|YAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.9224853515625	3	417.922578	1250.7459	3.1796	0.0013288	-3.1301	-0.0013081	0.049492	2.0684E-05	417.9212124698524	107.86	0.32727	107.89	107.6	107.93	0.035622					12	7	2	0	0	0	0.86014	1	11829	11829		23.378	4.8469	1	1035800	+		26564	29878	17895	17905	30287	30287					0.13056145479754377
LEQPRVQRLL	10	Unmodified	_LEQPRVQRLL_					0	0	0			REV__nc|ENSG00000137693|P46937-3|YAP1	REV__nc|ENSG00000137693|P46937-3|YAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.92242431640625	3	417.922578	1250.7459	-1.7716	-0.00074038	1.1592	0.00048446	-0.61238	-0.00025593	417.92308931399344	105.49	2.9586	105.65	104.79	107.75	0.15925					261	73	4	0	0	0	0.85251	1	11215	11215		19.263	0.73163	1	33626000	+		26565	29878	17895	17905	30288	30288					0.13056145479754377
LEQPRVQRLL	10	Unmodified	_LEQPRVQRLL_					0	0	0			REV__nc|ENSG00000137693|P46937-3|YAP1	REV__nc|ENSG00000137693|P46937-3|YAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3794555664062	2	626.380229	1250.7459	0.92622	0.00058016	-1.9189	-0.001202	-0.9927	-0.00062181	626.3789411036608	105.61	2.6191	105.72	104.9	107.52	0.10766					334	64	6	0	0	0	0.8545	1	11468	11468		36.447	2.5251	1	80450000	+		26566	29878	17895	17905	30289	30289					0.13056145479754377
LEQPRVQRLL	10	Unmodified	_LEQPRVQRLL_					0	0	0			REV__nc|ENSG00000137693|P46937-3|YAP1	REV__nc|ENSG00000137693|P46937-3|YAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92230224609375	3	417.922578	1250.7459	-1.8945	-0.00079175	1.1534	0.00048205	-0.74105	-0.0003097	417.92301973502657	105.61	2.7753	105.68	104.89	107.66	0.073112					226	67	4	0	0	0	0.85251	1	11237	11237		19.263	5.7547	1	18308000	+		26567	29878	17895	17905	30290	30290					0.13056145479754377
LEQPRVQRLL	10	Unmodified	_LEQPRVQRLL_					0	0	0			REV__nc|ENSG00000137693|P46937-3|YAP1	REV__nc|ENSG00000137693|P46937-3|YAP1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	417.922578	1250.7459	-0.96183	-0.00040197	0.25355	0.00010597	-0.70828	-0.000296	418.25686633314797	107.8	0.30913	107.8	107.53	107.83	0	-0.10225	0.0014248	NaN	23.378	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1224500	+		26568	29878	17895	17905							0.13056145479754377
LEQPRVQRLL	10	Unmodified	_LEQPRVQRLL_					0	0	0			REV__nc|ENSG00000137693|P46937-3|YAP1	REV__nc|ENSG00000137693|P46937-3|YAP1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	417.922578	1250.7459	3.1796	0.0013288	-3.1301	-0.0013081	0.049492	2.0684E-05	417.9212124698524	107.86	0.32727	107.89	107.6	107.93	0.035622	-0.011623	-0.0028174	NaN	23.378	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1035800	+		26569	29878	17895	17905							0.13056145479754377
LEQPRVQRLL	10	Unmodified	_LEQPRVQRLL_					0	0	0			REV__nc|ENSG00000137693|P46937-3|YAP1	REV__nc|ENSG00000137693|P46937-3|YAP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	417.922578	1250.7459	-1.7715	-0.00074034	0.53151	0.00022213	-1.24	-0.00051821	417.9225689476966	107.82	0.41713	107.96	107.61	108.03	0.13867	0.058139	0.0017733	NaN	23.378	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	927630	+		26570	29878	17895	17905							0.13056145479754377
LEQPRVQRLL	10	Unmodified	_LEQPRVQRLL_					0	0	0			REV__nc|ENSG00000137693|P46937-3|YAP1	REV__nc|ENSG00000137693|P46937-3|YAP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	417.922578	1250.7459	0.73406	0.00030678	-1.9364	-0.00080926	-1.2023	-0.00050247	418.25603676690776	107.88	0.39149	107.96	107.58	107.98	0.084412	0.05472	-0.0013208	NaN	23.378	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1497300	+		26571	29878	17895	17905							0.13056145479754377
LEQPRVQRLL	10	Unmodified	_LEQPRVQRLL_					0	0	0			REV__nc|ENSG00000137693|P46937-3|YAP1	REV__nc|ENSG00000137693|P46937-3|YAP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	417.922578	1250.7459	-1.8945	-0.00079174	1.9017	0.00079475	0.0071946	3.0068E-06	418.2579225228939	107.87	0.3535	107.91	107.58	107.93	0.036125	0.0010107	0.0034912	NaN	23.378	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1567100	+		26572	29878	17895	17905							0.13056145479754377
LEQQKNRVSA	10	Unmodified	_LEQQKNRVSA_					0	0	0			REV__ENSG00000144395|ENST00000389175|CCDC150	REV__ENSG00000144395|ENST00000389175|CCDC150	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.8236694335938	2	586.822744	1171.63093	-0.26066	-0.00015296	2.0511	0.0012036	1.7905	0.0010507	586.8238105998267	110.35	1.3355	110.35	110.09	111.43	0					132	40	5	0	0	0	0.86587	1	11464	11464		29.17	1.0886	1	4860400	+		26573	19886	17896	17906	30291	30291					0.051984162779717735
LEQQKNRVSA	10	Unmodified	_LEQQKNRVSA_					0	0	0			REV__ENSG00000144395|ENST00000389175|CCDC150	REV__ENSG00000144395|ENST00000389175|CCDC150	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	586.8231811523438	2	586.822744	1171.63093	-0.35782	-0.00020998	2.005	0.0011766	1.6472	0.0009666	586.8237768221713	110.28	1.7008	110.31	110.06	111.76	0.031738					152	59	5	0	0	0	0.86106	1	12063	12063		33.922	2.2874	1	6766000	+		26574	19886	17896	17906	30292	30292					0.051984162779717735
LEQQLKQTRA	10	Unmodified	_LEQQLKQTRA_					0	0	0			REV__nc|ENSG00000068400|Q4V328-4|GRIPAP1	REV__nc|ENSG00000068400|Q4V328-4|GRIPAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5641174316406	3	405.566571	1213.67788	-1.8641	-0.000756	-3.3109	-0.0013428	-5.175	-0.0020988	405.56510136906576	61.167	0.87137	61.268	60.446	61.317	0.10082					82	40	3	0	0	0	0.86409	1	5285	5285		25.126	2.5463	1	1002300	+		26575	16559	17897	17907	30293	30293					0.07959275829102808
LEQQNKILL	9	Unmodified	_LEQQNKILL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.8289184570312	2	549.829506	1097.64446	-1.509	-0.0008297	1.0078	0.00055412	-0.50121	-0.00027558	549.829981948683	48.545	1.2936	49.015	48.546	49.84	0.46941					84	31	4	0	0	0	2.8862E-29	1	4673	4673		191.63	15.215	1	6848200			26576	869	17898	17908	30294	30294					0.09954274057213297
LEQQNKILL	9	Unmodified	_LEQQNKILL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.8295288085938	2	549.829506	1097.64446	-0.21968	-0.00012078	-0.18537	-0.00010192	-0.40505	-0.00022271	549.8292765702838	48.371	0.96567	49.276	48.963	49.929	0.90424					63	23	4	0	0	0	8.9147E-29	4	4687	4654;4663;4675;4687		186.09	33.618	1	6897500			26577	869	17898	17908	30295;30296;30297;30298	30298					0.09954274057213297
LEQREKARKE	10	Unmodified	_LEQREKARKE_					0	0	0			REV__ENSG00000088325|ENST00000300403|TPX2	REV__ENSG00000088325|ENST00000300403|TPX2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4055786132812	2	643.8624	1285.71025	0.94331	0.00060736	-2.8604	-0.0018417	-1.9171	-0.0012343	643.859634784883	105.49	0.11303	105.6	105.54	105.66	0.10766					4	2	2	0	0	0	0.37624	1	11250	11250		45.972	0	1	47446	+		26578	15770	17899	17909	30299	30299					0.07882063232091241
LEQRHKAQVL	10	Unmodified	_LEQRHKAQVL_					0	0	0		ENSG00000130762|ENST00000378378|ARHGEF16;nc|ENSG00000130762|Q5VV41-2|ARHGEF16;ENST00000464620.1_1_1:3388185-3390209:+|nuORF;ENST00000485984.1_1_1:3389348-3394597:+|nuORF	ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.354736328125	2	611.356754	1220.69895	2.1766	0.0013307	-3.4744	-0.0021241	-1.2977	-0.00079338	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.77314	1	10019	10019		40.778	1.5253	1	5823000			26579	3679	17900	17910	30300	30300					0.09743285928607293
LEQRKLSEY	9	Unmodified	_LEQRKLSEY_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.3162841796875	2	583.31422	1164.61389	0.16238	9.4718E-05	2.6597	0.0015514	2.822	0.0016461	583.3165847413246	51.625	0.58139	52.293	51.895	52.477	0.6673					26	13	3	0	0	0	0.69624	1	5164	5164		40.778	2.9666	1	627370	+		26580	23243	17901	17911	30301	30301					0.03816495672140263
LEQRKLSEY	9	Unmodified	_LEQRKLSEY_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	583.31422	1164.61389	-1.0313	-0.00060158	5.852	0.0034135	4.8207	0.002812	583.3174099327215	51.809	0.37703	52.244	52.075	52.452	0.43505	-0.024497	0.0008688	NaN	40.778	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	536560	+		26581	23243	17901	17911							0.03816495672140263
LEQRKLSEY	9	Unmodified	_LEQRKLSEY_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	583.31422	1164.61389	0.16238	9.4718E-05	2.6597	0.0015514	2.822	0.0016461	583.3165847413246	51.625	0.58139	52.293	51.895	52.477	0.6673	0.024497	-0.0028554	NaN	40.778	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	627370	+		26582	23243	17901	17911							0.03816495672140263
LEQRLCCLK	9	Carbamidomethyl (C)	_LEQRLC(Carbamidomethyl (C))CLK_	LEQRLC(0.5)C(0.5)LK		LEQRLC(0)C(0)LK		0	1	0			REV__ENSG00000132361|ENST00000651024|CLUH	REV__ENSG00000132361|ENST00000651024|CLUH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	581.8064575195312	2	581.807193	1161.59983	-1.759	-0.0010234	-4.081	-0.0023744	-5.84	-0.0033977	581.8047058865073	62.986	1.4271	63.374	62.752	64.179	0.3878					94	32	4	0	0	0	0.44421	1	6802	6802		54.776	8.8041	2	1535400	+		26583	18998	17902	17912	30302	30302	238;239				0.02549803647821136
LEQSDKVY	8	Unmodified	_LEQSDKVY_					0	0	0		ENST00000456901.1_1_7:145280818-145281352:+|nuORF	ENST00000456901.1_1_7:145280818-145281352:+|nuORF	ENST00000456901.1_1_7:145280818-145281352:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2474365234375	2	491.248015	980.481476	-0.35827	-0.000176	0.36076	0.00017722	0.002487	1.2217E-06	491.2480641110002	49.675	0.86356	50.134	49.789	50.653	0.45983					42	20	3	0	0	0	0.3622	1	4849	4849		101.21	17.924	1	1413100			26584	11973	17903	17913	30303	30303					-0.009545290646542526
LEQSRARLIPI	11	Unmodified	_LEQSRARLIPI_					0	0	0		ENSG00000136286|ENST00000258787|MYO1G;ENST00000463516.5_1_7:45003626-45005995:-|nuORF;ENST00000483585.5_1_7:45002340-45005995:-|nuORF	ENSG00000136286|ENST00000258787|MYO1G	ENSG00000136286|ENST00000258787|MYO1G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3936767578125	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.69995	1	12351	12351		31.53	5.9558	1	2297700			26585	4104	17904	17914	30304	30304					0.13652414651232903
LEQSRRPFP	9	Unmodified	_LEQSRRPFP_					0	0	0			REV__ENST00000539526.5_1_11:117708861-117708969:-|nuORF	REV__ENST00000539526.5_1_11:117708861-117708969:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.2155151367188	2	565.309272	1128.60399	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.082	1	61.471	60.971	61.971	0.38945								0	0	0	0.12483	1	6506	6506		74.255	16.025	1		+		26586	28451	17905	17915	30305	30305					0.04483352457418732
LEQSTSRPT	9	Unmodified	_LEQSTSRPT_					0	0	0			REV__nc|ENSG00000022567|Q5BKX6|SLC45A4	REV__nc|ENSG00000022567|Q5BKX6|SLC45A4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8038635253906	2	509.76182	1017.50909	0.62291	0.00031753	-4.3098	-0.002197	-3.6869	-0.0018794	509.759518696802	87.926	0.5359	88.375	88.059	88.595	0.44893					20	12	2	0	0	0	0.20789	1	10306	10306		19.997	7.7899	1	178830	+		26587	16244	17906	17916	30306	30306					0.0010337419557799876
LEQTKEKMKE	10	Unmodified	_LEQTKEKMKE_					0	0	0			REV__ENSG00000117724|ENST00000366955|CENPF	REV__ENSG00000117724|ENST00000366955|CENPF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.8913879394531	3	421.891956	1262.65404	-1.8665	-0.00078747	0.50486	0.000213	-1.3617	-0.00057448	421.8920663173041	29.324	1.0664	29.391	29.078	30.145	0.066727					131	48	5	0	0	0	0.4503	1	1240	1240		59.931	10.395	1	728440	+		26588	18280	17907	17917	30307	30307					0.03321674280391562
LEQVQLLYG	9	Unmodified	_LEQVQLLYG_					0	0	0			REV__nc|ENSG00000105366|Q9NYZ4-2|SIGLEC8	REV__nc|ENSG00000105366|Q9NYZ4-2|SIGLEC8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8169555664062	2	531.795132	1061.57571	-1.5114	-0.00080377	2.4999	0.0013295	0.98851	0.00052568	532.2985231589348	89.21	0.25995	89.383	89.299	89.559	0.17234					7	5	2	0	0	0	0.20789	1	8865	8865		25.574	0	1	31226	+		26589	17529	17908	17918	30308	30308					0.04738609757487211
LEQVTIFLL	9	Unmodified	_LEQVTIFLL_					0	0	0		ENST00000483443.1_1_2:238664770-238678725:+|nuORF	ENST00000483443.1_1_2:238664770-238678725:+|nuORF	ENST00000483443.1_1_2:238664770-238678725:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3265991210938	2	538.323525	1074.6325	3.5618	0.0019174	3.4053	0.0018331	6.967	0.0037505	538.3252790877391	103.43	1.149	103.39	103.04	104.18	-0.043755					64	27	3	0	0	0	0.74721	1	11303	11303		37.159	2.9866	1	1012900			26590	12512	17909	17919	30309	30309					0.09816657314013355
LERAAGPR	8	Unmodified	_LERAAGPR_					0	0	0		ENST00000257359.6_1_11:130297588-130298293:-|nuORF	ENST00000257359.6_1_11:130297588-130298293:-|nuORF	ENST00000257359.6_1_11:130297588-130298293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2513732910156	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.87922	1	7511	7511		31.955	3.7006	1	3322700			26591	9352	17910	17920	30310	30310					0.04839453677379879
LERAAPGR	8	Unmodified	_LERAAPGR_					0	0	0		ENST00000395824.5_1_17:16472360-16472447:-|nuORF	ENST00000395824.5_1_17:16472360-16472447:-|nuORF	ENST00000395824.5_1_17:16472360-16472447:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25335693359375	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.8347	1	8034	8034		23.042	0	1	2494100			26592	11100	17911	17921	30311	30311					0.04839453677379879
LERADTAEKAL	11	Unmodified	_LERADTAEKAL_					0	0	0		nc|ENSG00000144306|Q0VDG4-2|SCRN3;ENSG00000144306|ENST00000272732|SCRN3	nc|ENSG00000144306|Q0VDG4-2|SCRN3	nc|ENSG00000144306|Q0VDG4-2|SCRN3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5649108886719	3	406.222582	1215.64592	0.012679	5.1503E-06	-4.3086	-0.0017502	-4.2959	-0.0017451	406.22093633521575	59.291	0.76371	59.26	58.89	59.653	-0.030888					30	19	2	0	0	0	0.17272	1	5573	5573		16.57	0.64908	1	58539			26593	4701	17912	17922	30312	30312					0.04671863355270034
LERAGALLPAI	11	Unmodified	_LERAGALLPAI_					0	0	0		ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	562.3444213867188	2	562.345323	1122.67609	0.77292	0.00043465	-3.8043	-0.0021393	-3.0314	-0.0017047	562.3430494101636	90.476	3.0468	90.629	89.657	92.704	0.15388					171	72	3	0	0	0	0.80784	1	9167	9167		9.7057	0	1	591570			26594	3668	17913	17923	30313	30313					0.11966266811123205
LERATRASK	9	Unmodified	_LERATRASK_					0	0	0			REV__ENSG00000083457|ENST00000263087|ITGAE	REV__ENSG00000083457|ENST00000263087|ITGAE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3013305664062	2	516.301447	1030.58834	-0.58657	-0.00030285	-1.0407	-0.00053731	-1.6273	-0.00084016	516.3016574074306	57.099	1.4441	57.132	56.795	58.239	0.033184					114	45	4	0	0	0	0.7932	1	5201	5201		25.574	2.0514	1	705170	+		26595	16855	17914	17924	30314	30314					0.07427065940350985
LERCILAI	8	Unmodified	_LERCILAI_					0	0	0		ENST00000483509.1_1_2:61319655-61320429:+|nuORF	ENST00000483509.1_1_2:61319655-61320429:+|nuORF	ENST00000483509.1_1_2:61319655-61320429:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7773742675781	2	465.775688	929.536823	-0.1189	-5.538E-05	4.3164	0.0020105	4.1975	0.0019551	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.89457	1	7769	7769		37.028	0	1	345200			26596	12515	17915	17925	30315	30315					0.06923605922111165
LERCQLAV	8	Unmodified	_LERCQLAV_					0	0	0		ENST00000265036.9_1_5:59941364-59941415:-|nuORF	ENST00000265036.9_1_5:59941364-59941415:-|nuORF	ENST00000265036.9_1_5:59941364-59941415:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2532958984375	2	466.25512	930.495686	-0.11965	-5.5788E-05	-2.968	-0.0013838	-3.0876	-0.0014396	466.2536537931843	61.171	1.1863	61.159	60.038	61.224	-0.012203					48	38	2	0	0	0	0.87479	1	5679	5679		30.504	1.3541	1	281870			26597	9492	17916	17926	30316	30316					0.027658448826400672
LERCQLAV	8	Unmodified	_LERCQLAV_					0	0	0		ENST00000265036.9_1_5:59941364-59941415:-|nuORF	ENST00000265036.9_1_5:59941364-59941415:-|nuORF	ENST00000265036.9_1_5:59941364-59941415:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2522277832031	2	466.25512	930.495686	-1.0712	-0.00049944	-1.7254	-0.00080447	-2.7966	-0.0013039	466.2541904327881	60.586	1.2512	60.686	59.935	61.186	0.10082					87	49	2	0	0	0	0.89043	1	5269	5269		35.618	3.6634	1	202870			26598	9492	17916	17926	30317	30317					0.027658448826400672
LERELDDL	8	Unmodified	_LERELDDL_					0	0	0		ENSG00000118898|ENST00000345988|PPL	ENSG00000118898|ENST00000345988|PPL	ENSG00000118898|ENST00000345988|PPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.75885009765625	2	501.758746	1001.50294	-0.57284	-0.00028743	0.68338	0.00034289	0.11053	5.5461E-05	501.7589476140449	46.478	0.58158	47.401	47.069	47.651	0.92315					26	13	3	0	0	0	0.48059	1	4382	4382		76.774	0	1	2172900			26599	3047	17917	17927	30318	30318					0.0022485596406340846
LERERKGG	8	Unmodified	_LERERKGG_					0	0	0		ENST00000493342.1_1_X:24745055-24752029:+|nuORF	ENST00000493342.1_1_X:24745055-24752029:+|nuORF	ENST00000493342.1_1_X:24745055-24752029:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7669372558594	2	472.76724	943.519927	-0.41041	-0.00019403	0.54101	0.00025577	0.1306	6.1745E-05	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.90523	1	8371	8371		40.778	2.9666	1	590200			26600	12725	17918	17928	30319	30319					0.04590821360534392
LERGKTLHIKA	11	Unmodified	_LERGKTLHIKA_					0	0	0		ENSG00000173599|ENST00000393960|PC;ENST00000528224.1_1_11:66616372-66617354:-|nuORF	ENSG00000173599|ENST00000393960|PC	ENSG00000173599|ENST00000393960|PC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5923156738281	3	422.594461	1264.76155	0.31839	0.00013455	-3.8415	-0.0016234	-3.5231	-0.0014888	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.75779	1	4561	4561		20.315	3.5976	1	1249100			26601	6875	17919	17929	30320	30320					0.13976431996798055
LERHRRLL	8	Unmodified	_LERHRRLL_					0	0	0			REV__ENST00000264255.7_1_2:99949665-99952760:-|nuORF	REV__ENST00000264255.7_1_2:99949665-99952760:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8406982421875	2	546.841074	1091.66759	0.96702	0.0005288	-2.8806	-0.0015752	-1.9136	-0.0010464	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.86288	1	12134	12134		26.796	2.5934	1	9124000	+		26602	24468	17920	17930	30321	30321					0.12542757685173456
LERIFLTY	8	Unmodified	_LERIFLTY_					0	0	0			REV__nc|ENSG00000042781|O75445-3|USH2A	REV__nc|ENSG00000042781|O75445-3|USH2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.7999877929688	2	527.800217	1053.58588	-0.25076	-0.00013235	-1.5946	-0.00084162	-1.8453	-0.00097397	527.8000204208644	61.956	1.1426	62.344	61.957	63.099	0.38846					77	25	5	0	0	0	0.91472	1	6641	6641		44.117	0	1	495170	+		26603	16330	17921	17931	30322	30322					0.06123217482695509
LERIFLTY	8	Unmodified	_LERIFLTY_					0	0	0			REV__nc|ENSG00000042781|O75445-3|USH2A	REV__nc|ENSG00000042781|O75445-3|USH2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.800048828125	2	527.800217	1053.58588	0.077074	4.068E-05	-1.2257	-0.00064695	-1.1487	-0.00060627	527.7998583804642	61.832	1.4183	62.385	62.006	63.425	0.55386					78	32	6	0	0	0	0.93293	1	6612	6612		51.335	1.3109	1	590010	+		26604	16330	17921	17931	30323	30323					0.06123217482695509
LERIRRSILP	10	Unmodified	_LERIRRSILP_					0	0	0		ENSG00000065618|ENST00000648076|COL17A1;nc|ENSG00000065618|Q9UMD9-2|COL17A1;ENST00000480127.1_1_10:105815115-105815723:-|nuORF	ENSG00000065618|ENST00000648076|COL17A1	ENSG00000065618|ENST00000648076|COL17A1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2654724121094	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.189	1	50.219	49.719	50.719	0.029629								0	0	0	0.45132	1	3928	3928		18.531	0.69791	1				26605	1136	17922	17932	30324	30324					0.16172138233719124
LERISDGY	8	Unmodified	_LERISDGY_					0	0	0		nc|ENSG00000170381|O15041-2|SEMA3E;ENSG00000170381|ENST00000643230|SEMA3E	nc|ENSG00000170381|O15041-2|SEMA3E	nc|ENSG00000170381|O15041-2|SEMA3E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.7433166503906	2	476.740357	951.46616	0.12568	5.9919E-05	4.3539	0.0020757	4.4796	0.0021356	476.7422323018569	78.776	0.58596	78.723	78.44	79.026	-0.053551					30	14	3	0	0	0	0.92457	1	7879	7879		47.916	3.7988	1	138270			26606	6580	17923	17933	30325	30325					-0.011513958618593279
LERKNVKVNPL	11	Unmodified	_LERKNVKVNPL_					0	0	0		ENST00000560298.1_1_15:57024815-57024902:-|nuORF	ENST00000560298.1_1_15:57024815-57024902:-|nuORF	ENST00000560298.1_1_15:57024815-57024902:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2678527832031	3	437.269866	1308.78777	-0.73822	-0.0003228	-3.8393	-0.0016788	-4.5775	-0.0020016	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.76579	1	4611	4611		18.531	0.69791	1	3639500			26607	13818	17924	17934	30326	30326					0.14572701168299318
LERKNVKVNPL	11	Unmodified	_LERKNVKVNPL_					0	0	0		ENST00000560298.1_1_15:57024815-57024902:-|nuORF	ENST00000560298.1_1_15:57024815-57024902:-|nuORF	ENST00000560298.1_1_15:57024815-57024902:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2675476074219	3	437.269866	1308.78777	-0.59734	-0.0002612	-4.1797	-0.0018276	-4.777	-0.0020888	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.76579	1	4354	4354		18.531	1.3643	1	2564600			26608	13818	17924	17934	30327	30327					0.14572701168299318
LERKQAVN	8	Unmodified	_LERKQAVN_					0	0	0			REV__ENSG00000156284|ENST00000399899|CLDN8	REV__ENSG00000156284|ENST00000399899|CLDN8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773132324219	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.87922	1	8411	8411		31.955	0	1	7040000	+		26609	20479	17925	17935	30328	30328					0.060319920203255606
LERLIRSLLP	10	Unmodified	_LERLIRSLLP_					0	0	0			REV__ENST00000354960.7_1_4:120528237-120549693:-|nuORF	REV__ENST00000354960.7_1_4:120528237-120549693:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9295349121094	3	403.92744	1208.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.575	1	48.575	48.075	49.075	0.00016785								0	0	0	0.45132	1	4049	4049		20.03	4.6974	1		+		26610	25366	17926	17936	30329	30329					0.16446217627890292
LERLIRSLLP	10	Unmodified	_LERLIRSLLP_					0	0	0			REV__ENST00000354960.7_1_4:120528237-120549693:-|nuORF	REV__ENST00000354960.7_1_4:120528237-120549693:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9290466308594	3	403.92744	1208.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.842	1	48.88	48.38	49.38	0.037731								0	0	0	0.45132	1	3746	3746		18.531	0.69791	1		+		26611	25366	17926	17936	30330	30330					0.16446217627890292
LERLKRKYRNQ	11	Unmodified	_LERLKRKYRNQ_					0	0	0		ENSG00000070495|ENST00000397625|JMJD6;nc|ENSG00000070495|Q6NYC1-3|JMJD6;nc|ENSG00000070495|Q6NYC1-2|JMJD6	ENSG00000070495|ENST00000397625|JMJD6	ENSG00000070495|ENST00000397625|JMJD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.9677734375	3	501.967069	1502.87938	0.21344	0.00010714	2.0171	0.0010125	2.2306	0.0011197	501.9680903121297	33.907	0.95065	34.105	33.766	34.717	0.19865					69	22	4	0	0	0	0.75779	1	2506	2506		20.315	3.7852	1	3500100			26612	1244	17927	17937	30331	30331					0.14805384585451975
LERLRRKWLN	10	Unmodified	_LERLRRKWLN_					0	0	0		ENSG00000197892|ENST00000524189|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.94866943359375	3	461.949239	1382.82589	0.76575	0.00035374	-3.0751	-0.0014206	-2.3094	-0.0010668	461.94782502952427	107.84	0.75671	107.93	107.26	108.01	0.084404					86	18	6	0	0	0	0.85441	1	11572	11572		20.837	2.3061	1	101570000			26613	8210	17928	17938	30332	30332					0.14978631873623272
LERMFLSF	8	Oxidation (M)	_LERM(Oxidation (M))FLSF_		LERM(1)FLSF		LERM(71)FLSF	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.7705688476562	2	529.770603	1057.52665	0.52899	0.00028025	-0.25093	-0.00013293	0.27807	0.00014731	529.7701667802362	67.166	0.82552	67.293	67.003	67.829	0.12748					76	32	3	0	0	0	0.60357	1	6010	6010		71.296	18.997	1	704470		+	26614	7934;579	17929	17939	30333	30333		7			0.0001899819685604598
LERNKDLLP	9	Unmodified	_LERNKDLLP_					0	0	0		nc|ENSG00000168615|Q13443-2|ADAM9;ENSG00000168615|ENST00000487273|ADAM9	nc|ENSG00000168615|Q13443-2|ADAM9	nc|ENSG00000168615|Q13443-2|ADAM9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.3179321289062	2	549.319306	1096.62406	-0.48303	-0.00026534	-2.2746	-0.0012495	-2.7576	-0.0015148	549.3179926126767	101.27	2.2263	101.27	100.73	102.96	0					128	54	4	0	0	0	0.76764	1	10354	10354		34.173	0	1	1196600			26615	6418	17930	17940	30334	30334					0.0796110339738334
LERNRLTDYYE	11	Unmodified	_LERNRLTDYYE_					0	0	0		ENSG00000179941|ENST00000650064|BBS10	ENSG00000179941|ENST00000650064|BBS10	ENSG00000179941|ENST00000650064|BBS10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.2433776855469	3	491.244045	1470.71031	-1.9663	-0.00096595	-0.22132	-0.00010872	-2.1877	-0.0010747	491.24390598531505	19.16	0.65491	19.16	18.809	19.464	0					70	21	4	0	0	0	0.72892	1	393	393		26.75	1.6819	1	480380			26616	7308	17931	17941	30335	30335					-0.006219815585836841
LERPYIGLV	9	Unmodified	_LERPYIGLV_					0	0	0			REV__L1MB7_dup901|chr1:110945925-110946522:+|1.120968765350959|0.2621707466060082|2.1|63.0|2|1|sense	REV__L1MB7_dup901|chr1:110945925-110946522:+|1.120968765350959|0.2621707466060082|2.1|63.0|2|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7802124023438	2	530.313492	1058.61243	0.061072	3.2387E-05	-0.052869	-2.8037E-05	0.0082025	4.3499E-06	530.3133346697399	72.595	0.49553	73.149	72.86	73.355	0.55387					12	11	2	0	0	0	0.20789	1	8110	8110		23.042	12.177	1	67884	+		26617	29526	17932	17942	30336	30336					0.08546906374044738
LERPYIGLV	9	Unmodified	_LERPYIGLV_					0	0	0			REV__L1MB7_dup901|chr1:110945925-110946522:+|1.120968765350959|0.2621707466060082|2.1|63.0|2|1|sense	REV__L1MB7_dup901|chr1:110945925-110946522:+|1.120968765350959|0.2621707466060082|2.1|63.0|2|1|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	530.313492	1058.61243	-0.49582	-0.00026294	1.2566	0.00066638	0.76076	0.00040344	530.3139501509428	72.73	0.33116	73.116	72.875	73.207	0.38581	-0.016492	0.00068803	NaN	23.042	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61970	+		26618	29526	17932	17942							0.08546906374044738
LERRLKRIE	9	Unmodified	_LERRLKRIE_					0	0	0			REV__ENSG00000166833|ENST00000349880|NAV2	REV__ENSG00000166833|ENST00000349880|NAV2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.9227600097656	3	404.922689	1211.74624	-0.36148	-0.00014637	0.96527	0.00039086	0.60379	0.00024449	404.9229767423174	26.33	2.0851	26.291	25.89	27.975	-0.038523					105	48	5	0	0	0	0.7932	1	1171	1171		20.837	2.3061	1	394560	+		26619	21328	17933	17943	30337	30337					0.14883565199625082
LERRVASAS	9	Unmodified	_LERRVASAS_					0	0	0		nc|ENSG00000226266|Q9UIF8-4|BAZ2B;nc|ENSG00000226266|Q9UIF8-2|BAZ2B;nc|ENSG00000226266|Q9UIF8-5|BAZ2B;nc|ENSG00000226266|Q9UIF8-3|BAZ2B;ENSG00000123636|ENST00000392783|BAZ2B;ENST00000474437.1_1_2:160182413-160204074:-|nuORF	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7805480957031	2	494.780348	987.546142	-1.0037	-0.00049663	0.6697	0.00033135	-0.33405	-0.00016528	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.76255	1	8403	8403		35.618	1.6967	1	265620			26620	3286	17934	17944	30338	30338					0.05187090532001548
LERSGSHRD	9	Unmodified	_LERSGSHRD_					0	0	0			REV__ENSG00000152292|ENST00000469800|SH2D6	REV__ENSG00000152292|ENST00000469800|SH2D6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7633056640625	2	528.762686	1055.51082	-0.33637	-0.00017786	2.4987	0.0013212	2.1624	0.0011434	528.7638860734646	60.471	0.67105	61.024	60.688	61.359	0.55323					40	18	3	0	0	0	0.11055	1	6425	6425		90.37	2.6734	1	1144300	+		26621	20293	17935	17945	30339	30339					-0.014715719957848705
LERSKSLGG	9	Unmodified	_LERSKSLGG_					0	0	0			REV__ENSG00000139767|ENST00000267260|SRRM4	REV__ENSG00000139767|ENST00000267260|SRRM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.769287109375	2	473.769448	945.524344	-0.53381	-0.0002529	0.2553	0.00012095	-0.27851	-0.00013195	473.76958016102765	28.574	0.70219	28.555	28.215	28.917	-0.019407					32	17	3	0	0	0	0.67345	1	1375	1375		42.396	3.59	1	82680	+		26622	19569	17936	17946	30340	30340					0.04940285783447962
LERSYQLL	8	Unmodified	_LERSYQLL_					0	0	0			REV__ENST00000404488.7_1_22:50318062-50319155:+|nuORF	REV__ENST00000404488.7_1_22:50318062-50319155:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.2865295410156	2	511.287474	1020.5604	-0.61526	-0.00031458	0.56414	0.00028844	-0.051117	-2.6136E-05	511.28771791246743	46.729	0.664	47.201	46.856	47.52	0.47139					26	15	2	0	0	0	0.87259	1	4424	4424		58.782	2.0609	1	1468900	+		26623	26282	17937	17947	30341	30341					0.050937429602981865
LERVSGIP	8	Unmodified	_LERVSGIP_					0	0	0		ENST00000528702.5_1_11:226003-233443:-|nuORF;nc|ENSG00000142082|Q9NTG7-2|SIRT3;ENSG00000142082|ENST00000382743|SIRT3	ENST00000528702.5_1_11:226003-233443:-|nuORF	ENST00000528702.5_1_11:226003-233443:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7604064941406	2	435.75581	869.497067	-0.73771	-0.00032146	-0.069715	-3.0379E-05	-0.80742	-0.00035184	435.7555170150529	87.931	0.89541	88.394	87.894	88.79	0.46312					44	21	3	0	0	0	0.4196	1	10320	10320		16.473	0	1	255760			26624	4541	17938	17948	30342	30342					0.05709802243052309
LERWIRKIFFY	11	Unmodified	_LERWIRKIFFY_					0	0	0			REV__ENST00000424989.1_1_1:37921191-37921512:-|nuORF	REV__ENST00000424989.1_1_1:37921191-37921512:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.1472778320312	3	524.301278	1569.882	0.17789	9.3268E-05	0.69197	0.0003628	0.86986	0.00045607	524.3015957558677	32.013	0.71597	31.961	31.604	32.32	-0.051031					21	15	2	0	0	0	0.18276	1	1869	1869		12.433	2.3289	1	64525	+		26625	26527	17939	17949	30343	30343					0.11985839990393288
LERWSGHVTRK	11	Unmodified	_LERWSGHVTRK_					0	0	0		ENST00000529410.5_1_6:130363903-130363936:+|nuORF	ENST00000529410.5_1_6:130363903-130363936:+|nuORF	ENST00000529410.5_1_6:130363903-130363936:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3011169433594	3	456.921349	1367.74222	0.012456	5.6916E-06	2.3665	0.0010813	2.379	0.001087	456.9222584307625	33.83	0.66179	34	33.78	34.441	0.16971					27	15	3	0	0	0	0.17289	1	2521	2521		34.087	18.749	1	316670			26626	13323	17940	17950	30344	30344					0.07305475705879871
LERWSGHVTRK	11	Unmodified	_LERWSGHVTRK_					0	0	0		ENST00000529410.5_1_6:130363903-130363936:+|nuORF	ENST00000529410.5_1_6:130363903-130363936:+|nuORF	ENST00000529410.5_1_6:130363903-130363936:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	456.921349	1367.74222	1.0156	0.00046404	1.3499	0.00061679	2.3655	0.0010808	456.9217962626937	33.847	0.49433	34.152	33.912	34.406	0.30494	0.17453	-0.00043176	NaN	34.087	27	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	368380			26627	13323	17940	17950							0.07305475705879871
LERYKLIP	8	Unmodified	_LERYKLIP_					0	0	0		ENST00000379026.6_1_19:36133589-36134644:+|nuORF	ENST00000379026.6_1_19:36133589-36134644:+|nuORF	ENST00000379026.6_1_19:36133589-36134644:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3126220703125	2	516.316035	1030.61752	0.81867	0.00042269	-4.2005	-0.0021688	-3.3818	-0.0017461	516.3139586362336	103.31	1.1027	103.44	102.97	104.08	0.12621					71	27	3	0	0	0	0.81548	1	10998	10998		20.482	0	1	1034200			26628	10881	17941	17951	30345	30345					0.10343210236646883
LERYKLIPGKL	11	Unmodified	_LERYKLIPGKL_					0	0	0		ENST00000379026.6_1_19:36133589-36134644:+|nuORF	ENST00000379026.6_1_19:36133589-36134644:+|nuORF	ENST00000379026.6_1_19:36133589-36134644:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	443.9482421875	3	443.946612	1328.81801	0.74556	0.00033099	3.6198	0.001607	4.3654	0.001938	443.9481188888374	107.16	1.4993	107.25	106.38	107.88	0.091263					116	35	4	0	0	0	0.72374	1	11497	11497		27.644	5.0823	1	2920200			26629	10881	17942	17952	30346	30346					0.16675059833460182
LESAPISS	8	Unmodified	_LESAPISS_					0	0	0		ENSG00000101542|ENST00000262717|CDH20	ENSG00000101542|ENST00000262717|CDH20	ENSG00000101542|ENST00000262717|CDH20	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.21185302734375	2	402.210901	802.407249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.711	1	23.713	23.213	24.213	0.0018959								0	0	0	0.29353	1	764	764		28.254	1.4582	1				26630	1947	17943	17953	30347	30347					-0.0018587215619163544
LESCFAVGPII	11	Unmodified	_LESCFAVGPII_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.8060913085938	2	574.804642	1147.59473	0.55395	0.00031842	3.2692	0.0018791	3.8231	0.0021976	574.8062082072089	33.854	0.41144	33.808	33.614	34.026	-0.045815					32	17	2	0	0	0	0.68378	1	1679	1679		34.173	0.25091	1	170110			26631	3499	17944	17954	30348	30348					0.02683823056872825
LESEDEVKL	9	Unmodified	_LESEDEVKL_					0	0	0		ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000514332.5_1_5:179048171-179050134:-|nuORF;ENST00000513972.5_1_5:179047887-179050134:-|nuORF;ENST00000524180.5_1_5:179047015-179050134:-|nuORF	ENSG00000169045|ENST00000393432|HNRNPH1	ENSG00000169045|ENST00000393432|HNRNPH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2708129882812	2	531.271687	1060.52882	-0.3129	-0.00016623	0.26905	0.00014294	-0.043842	-2.3292E-05	531.2716931508693	46.323	0.5637	46.794	46.457	47.021	0.47139					40	13	4	0	0	0	2.0213E-05	3	4357	4348;4357;4382		154.12	24.436	1	4642100			26632	6463	17945	17955	30349;30350;30351	30350					0.0009770541569196212
LESEDEVKL	9	Unmodified	_LESEDEVKL_					0	0	0		ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000514332.5_1_5:179048171-179050134:-|nuORF;ENST00000513972.5_1_5:179047887-179050134:-|nuORF;ENST00000524180.5_1_5:179047015-179050134:-|nuORF	ENSG00000169045|ENST00000393432|HNRNPH1	ENSG00000169045|ENST00000393432|HNRNPH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2709350585938	2	531.271687	1060.52882	-0.78106	-0.00041496	0.58019	0.00030824	-0.20087	-0.00010672	531.2718397589701	46.099	0.63906	46.995	46.728	47.367	0.89542					42	15	4	0	0	0	2.0213E-05	4	4340	4330;4340;4351;4366		154.12	26.811	1	3892600			26633	6463	17945	17955	30352;30353;30354;30355	30353					0.0009770541569196212
LESEHGSP	8	Unmodified	_LESEHGSP_					0	0	0		nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A;ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-3|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.26165771484375	2	428.195782	854.377011	-1.0414	-0.00044591	0.15329	6.5639E-05	-0.88808	-0.00038027	428.19622781717237	90.58	0.23109	91.051	90.971	91.202	0.47068					8	5	2	0	0	0	0.4196	1	10773	10773		24.203	0	1	56174			26634	3100	17946	17956	30356	30356					-0.056002308213578544
LESEKKELN	9	Unmodified	_LESEKKELN_					0	0	0			REV__ENSG00000185306|ENST00000543942|C12orf56	REV__ENSG00000185306|ENST00000543942|C12orf56	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3168334960938	2	545.292953	1088.57135	2.1961	0.0011975	2.999	0.0016353	5.1952	0.0028329	545.7956792770561	90.575	1.1776	90.505	89.698	90.876	-0.069969					61	27	3	0	0	0	0.20789	1	9430	9430		45.972	5.1941	1	149030	+		26635	22759	17947	17957	30357	30357					0.030611005439368455
LESGLKVY	8	Unmodified	_LESGLKVY_					0	0	0		ENST00000569700.5_1_16:1869077-1876788:-|nuORF;nc|ENSG00000063854|Q16775-3|HAGH;nc|ENSG00000063854|Q16775-2|HAGH;ENSG00000063854|ENST00000397356|HAGH	ENST00000569700.5_1_16:1869077-1876788:-|nuORF	ENST00000569700.5_1_16:1869077-1876788:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.60821533203125	2	454.758018	907.501483	-0.11875	-5.4003E-05	0.54968	0.00024997	0.43093	0.00019597	454.75820006687576	67.106	0.52592	67.657	67.415	67.941	0.55071					22	13	2	0	0	0	0.4196	1	7386	7386		19.36	0	1	276020			26636	1095	17948	17958	30358	30358					0.04403266665951833
LESHKLTILA	10	Unmodified	_LESHKLTILA_					0	0	0		ENSG00000280165|ENST00000409204|PCDH20	ENSG00000280165|ENST00000409204|PCDH20	ENSG00000280165|ENST00000409204|PCDH20	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.8116455078125	2	562.837331	1123.66011	0.62401	0.00035121	-2.8127	-0.0015831	-2.1887	-0.0012319	562.8353630901422	17.533	0.20549	16.922	16.798	17.003	-0.6107					6	4	2	0	0	0	0.37624	1	270	270		58.23	20.418	1	26104			26637	9048	17949	17959	30359	30359					0.10322560574240924
LESHLGRQK	9	Unmodified	_LESHLGRQK_					0	0	0			REV__ENSG00000139567|ENST00000388922|ACVRL1	REV__ENSG00000139567|ENST00000388922|ACVRL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.3047485351562	2	534.301447	1066.58834	-0.31695	-0.00016935	3.0061	0.0016062	2.6892	0.0014368	534.3029107286292	76.827	0.6277	77.395	77.077	77.704	0.56836					32	19	2	0	0	0	0.76764	1	8774	8774		34.173	1.3601	1	594010	+		26638	19550	17950	17960	30360	30360					0.05771065940371045
LESISPRR	8	Unmodified	_LESISPRR_					0	0	0			REV__chr1:228140363-228141633|63|33.57|0.83|5.33|+|ENST00000435153|GUK1,GUK1	REV__chr1:228140363-228141633|63|33.57|0.83|5.33|+|ENST00000435153|GUK1,GUK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27801513671875	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.86288	1	7695	7695		26.796	2.5934	1	2142700	+		26639	15440	17951	17961	30361	30361					0.060319920203255606
LESKRQITIY	10	Unmodified	_LESKRQITIY_					0	0	0			REV__ENSG00000131264|ENST00000373514|CDX4	REV__ENSG00000131264|ENST00000373514|CDX4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	625.8571166992188	2	625.858795	1249.70304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.231	1	77.284	76.784	77.784	0.052696								0	0	0	0.45132	1	7475	7475		31.53	8.4873	1		+		26640	18943	17952	17962	30362	30362					0.08817330631677578
LESLEAPTV	9	Unmodified	_LESLEAPTV_					0	0	0			REV__ENSG00000241973|ENST00000255882|PI4KA	REV__ENSG00000241973|ENST00000255882|PI4KA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2773132324219	2	479.758215	957.501877	-1.5183	-0.00072841	-0.57542	-0.00027606	-2.0937	-0.0010045	479.75764819364406	83.476	0.94946	83.614	82.968	83.918	0.13811					38	21	2	0	0	0	0.20789	1	8049	8049		20.947	5.3051	1	69530	+		26641	23828	17953	17963	30363	30363					0.021426415951509625
LESLGQAP	8	Unmodified	_LESLGQAP_					0	0	0		ENST00000402568.5_1_2:162016930-162016963:+|nuORF	ENST00000402568.5_1_2:162016930-162016963:+|nuORF	ENST00000402568.5_1_2:162016930-162016963:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.720947265625	2	407.718893	813.423233	2.692	0.0010976	1.3451	0.00054843	4.0371	0.001646	407.71961983038284	102.12	1.3069	102.42	101.63	102.94	0.29865					72	31	4	0	0	0	0.89494	1	12456	12456		37.159	6.6555	1	5871700			26642	11244	17954	17964	30364	30364					0.009058340807200693
LESLKVRI	8	Unmodified	_LESLKVRI_					0	0	0		nc|ENSG00000168386|Q4L180-6|FILIP1L;nc|ENSG00000168386|Q4L180-5|FILIP1L;nc|ENSG00000168386|Q4L180-3|FILIP1L;nc|ENSG00000168386|Q4L180-7|FILIP1L;nc|ENSG00000168386|Q4L180-2|FILIP1L;nc|ENSG00000168386|Q4L180|FILIP1L;ENSG00000168386|ENST00000477258|FILIP1L	nc|ENSG00000168386|Q4L180-6|FILIP1L	nc|ENSG00000168386|Q4L180-6|FILIP1L	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3104248046875	2	479.30821	956.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.751	1	47.741	47.241	48.241	-0.0093269								0	0	0	0.29703	1	3904	3904		37.159	0	1				26643	6397	17955	17965	30365	30365					0.12182923719615246
LESLRRTGT	9	Unmodified	_LESLRRTGT_					0	0	0			REV__ENSG00000130254|ENST00000252542|SAFB2	REV__ENSG00000130254|ENST00000252542|SAFB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.793212890625	2	516.793455	1031.57236	0.68918	0.00035616	-0.86967	-0.00044944	-0.18049	-9.3276E-05	516.7928457935418	86.219	2.6893	86.368	84.865	87.554	0.14902					141	62	3	0	0	0	0.7932	1	8603	8603		26.693	1.1189	1	296930	+		26644	18860	17956	17966	30366	30366					0.05783359703491442
LESMDLAI	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LESMDLAI_					1	0	0		ENST00000438477.2_1_1:120039232-120039448:-|nuORF	ENST00000438477.2_1_1:120039232-120039448:-|nuORF	ENST00000438477.2_1_1:120039232-120039448:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.2349548339844	2	467.233519	932.452484	0.4755	0.00022217	-0.81957	-0.00038293	-0.34407	-0.00016076	467.23311313074316	67.929	1.2916	68.056	67.71	69.002	0.12748					151	49	4	0	0	0	0.9159	1	6187	6187		44.531	9.3304	1	2838000			26645	11752	17957	17967	30367	30367					-0.016443896853161277
LESMKTDSF	9	Unmodified	_LESMKTDSF_					0	0	0			REV__nc|ENSG00000006459|Q6ZMT4-2|KDM7A	REV__nc|ENSG00000006459|Q6ZMT4-2|KDM7A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.3002319335938	2	529.247157	1056.47976	-0.51633	-0.00027327	-1.581	-0.00083675	-2.0974	-0.00111	529.2459889311573	57.746	1.0024	58.14	57.856	58.859	0.39407					40	24	3	0	0	0	0.20789	1	6116	6116		25.574	6.4705	1	619560	+		26646	16102	17958	17968	30368	30368					-0.04621906144939203
LESNEKQEKEG	11	Unmodified	_LESNEKQEKEG_					0	0	0			REV__ENSG00000055609|ENST00000262189|KMT2C	REV__ENSG00000055609|ENST00000262189|KMT2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	645.8124389648438	2	645.812239	1289.60992	-0.16689	-0.00010778	0.40793	0.00026345	0.24104	0.00015567	645.8123319203452	26.591	0.49831	26.415	26.205	26.703	-0.17559					26	10	4	0	0	0	0.3308	1	1468	1468		66.962	1.4965	1	228450	+		26647	16413	17959	17969	30369	30369					-0.02329638612263807
LESNFRNLK	9	Unmodified	_LESNFRNLK_					0	0	0			REV__ENSG00000212710|ENST00000391403|CTAGE1	REV__ENSG00000212710|ENST00000391403|CTAGE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.2740478515625	2	560.809105	1119.60366	0.54768	0.00030714	-0.38928	-0.00021831	0.1584	8.883E-05	560.8087603082379	31.413	0.94127	31.505	31.19	32.131	0.092003					46	21	4	0	0	0	0.20789	1	2121	2121		56.721	10.749	1	1176700	+		26648	23602	17960	17970	30370	30370					0.04863932737566756
LESPFLTT	8	Unmodified	_LESPFLTT_					0	0	0		ENSG00000150893|ENST00000280481|FREM2;nc|ENSG00000150893|Q5SZK8-2|FREM2	ENSG00000150893|ENST00000280481|FREM2;nc|ENSG00000150893|Q5SZK8-2|FREM2	nc|ENSG00000150893|Q5SZK8-2|FREM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	454.2426452636719	2	454.242201	906.469849	-1.5907	-0.00072257	1.8874	0.00085735	0.29673	0.00013479	454.2428961536622	82.982	1.1143	83.108	82.747	83.862	0.12601					33	25	2	0	0	0	0.92457	1	7999	7999		47.916	0	1	218330			26649	5085;14988	17961	17971	30371	30371					0.012872739119870857
LESPRAPTNP	10	Unmodified	_LESPRAPTNP_					0	0	0		nc|ENSG00000127124|Q5T1R4-2|HIVEP3;ENSG00000127124|ENST00000372583|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.2877807617188	2	541.285463	1080.55637	0.95607	0.00051751	-1.076	-0.00058242	-0.11992	-6.4911E-05	541.2847282396424	20.535	0.58039	20.465	20.183	20.763	-0.070011					63	26	3	0	0	0	0.86471	1	506	506		30.318	2.4355	1	207610			26650	3484	17962	17972	30372	30372					0.019316534665676954
LESPTTPLL	9	Unmodified	_LESPTTPLL_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.7761535644531	2	485.776408	969.538263	-0.51276	-0.00024909	0.65756	0.00031943	0.1448	7.034E-05	485.7765697674691	71.092	1.4164	71.476	70.999	72.416	0.38449					65	33	3	0	0	0	0.10807	3	7902	7889;7902;7915		90.777	0	1	1666300			26651	8948;12632	17963	17973	30373;30374;30375	30374					0.05227518491858518
LESPTTPLL	9	Unmodified	_LESPTTPLL_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.77679443359375	2	485.776408	969.538263	-0.29039	-0.00014107	0.53982	0.00026223	0.24943	0.00012117	485.7764898958847	71.02	1.3911	71.568	71.049	72.44	0.54756					69	33	4	0	0	0	0.015327	4	7911	7911;7924;7935;7947		128.86	8.4716	1	1986100			26652	8948;12632	17963	17973	30376;30377;30378;30379	30376					0.05227518491858518
LESRLKKVAKH	11	Unmodified	_LESRLKKVAKH_					0	0	0			REV__ENSG00000164010|ENST00000372517|ERMAP	REV__ENSG00000164010|ENST00000372517|ERMAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.27239990234375	3	436.941861	1307.80375	-1.785	-0.00077992	-3.1254	-0.0013656	-4.9104	-0.0021456	436.94038031452806	46.547	1.4604	46.547	46.099	47.56	0					130	44	4	0	0	0	0.76579	1	3572	3572		18.531	2.6104	1	1002300	+		26653	21008	17964	17974	30380	30380					0.1621640740515886
LESRLKKVAKH	11	Unmodified	_LESRLKKVAKH_					0	0	0			REV__ENSG00000164010|ENST00000372517|ERMAP	REV__ENSG00000164010|ENST00000372517|ERMAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2740173339844	3	436.941861	1307.80375	-0.88692	-0.00038753	-3.955	-0.0017281	-4.8419	-0.0021156	436.9399896728005	46.653	1.2955	46.625	46.139	47.434	-0.028782					103	32	5	0	0	0	0.75457	1	3873	3873		21.032	1.7696	1	597140	+		26654	21008	17964	17974	30381	30381					0.1621640740515886
LESRLPRR	8	Unmodified	_LESRLPRR_					0	0	0		ENSG00000120645|ENST00000538872|IQSEC3;nc|ENSG00000120645|Q9UPP2-2|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8086547851562	2	513.811982	1025.60941	-1.4445	-0.00074222	-4.4488	-0.0022859	-5.8934	-0.0030281	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.89043	1	3760	3760		35.618	6.4687	1	1675700			26655	3139	17965	17975	30382	30382					0.09763076039894258
LESRPIKNHK	10	Unmodified	_LESRPIKNHK_					0	0	0			REV__nc|ENSG00000132300|Q96EY7-2|PTCD3	REV__nc|ENSG00000132300|Q96EY7-2|PTCD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3499145507812	2	611.356754	1220.69895	2.4219	0.0014807	-3.0766	-0.0018809	-0.65465	-0.00040023	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.86718	1	10466	10466		27.882	0.83493	1	12656000	+		26656	18990	17966	17976	30383	30383					0.09743285928584555
LESSICFSL	9	Unmodified	_LESSICFSL_					0	0	0		ENSG00000147912|ENST00000432825|FBXO10	ENSG00000147912|ENST00000432825|FBXO10	ENSG00000147912|ENST00000432825|FBXO10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.7479553222656	2	499.746793	997.479033	-0.85273	-0.00042615	1.1589	0.00057914	0.30615	0.000153	499.74724797378053	74.742	3.1094	75.133	73.907	77.016	0.3911					155	76	3	0	0	0	0.67345	1	8455	8455		42.396	5.3677	1	1032200			26657	4930	17967	17977	30384	30384					-0.019807007939562027
LESSTPKNEM	10	Unmodified	_LESSTPKNEM_					0	0	0			REV__ENST00000504456.1_1_5:102343300-102364769:+|nuORF	REV__ENST00000504456.1_1_5:102343300-102364769:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.2797241210938	2	568.268621	1134.52269	0.49485	0.0002812	4.1098	0.0023355	4.6046	0.0026167	568.2707829269561	68.685	0.70061	69.07	68.737	69.437	0.38483					26	16	2	0	0	0	0.37624	1	7547	7547		39.253	4.1008	1	165820	+		26658	19962	17968	17978	30385	30385					-0.03919136087483821
LESTAIFFF	9	Unmodified	_LESTAIFFF_					0	0	0			REV__ENST00000508170.5_1_4:55131036-55131279:+|nuORF	REV__ENST00000508170.5_1_4:55131036-55131279:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	537.7774658203125	2	537.778951	1073.54335	0.070609	3.7972E-05	-1.8736	-0.0010076	-1.803	-0.00096961	537.7777783354844	43.95	0.88203	43.891	43.6	44.482	-0.058262					36	21	2	0	0	0	0.7932	1	3067	3067		17.365	0	1	173410	+		26659	27919	17969	17979	30386	30386					0.009518223544773718
LESVEKAKKRR	11	Unmodified	_LESVEKAKKRR_					0	0	0			REV__nc|ENSG00000197702|Q9NVD7-2|PARVA	REV__nc|ENSG00000197702|Q9NVD7-2|PARVA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6107482910156	3	448.60877	1342.80448	-1.3368	-0.0005997	2.6733	0.0011993	1.3365	0.00059957	448.60975879741926	77.285	1.2875	77.285	77.023	78.311	0					128	61	3	0	0	0	0.76892	1	7057	7057		17.833	0.6664	1	598490	+		26660	23260	17970	17980	30387	30387					0.14679202054207963
LESVRGPR	8	Unmodified	_LESVRGPR_					0	0	0		ENSG00000160396|ENST00000291823|HIPK4	ENSG00000160396|ENST00000291823|HIPK4	ENSG00000160396|ENST00000291823|HIPK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2641296386719	2	457.264333	912.514114	0.89563	0.00040954	-0.6068	-0.00027747	0.28882	0.00013207	457.26393331241866	95.103	1.606	95.149	94.704	96.31	0.046188					81	37	5	0	0	0	0.86288	1	10058	10058		26.796	0	1	993260			26661	5584	17971	17981	30388	30388					0.05435722848869773
LESVRGRP	8	Unmodified	_LESVRGRP_					0	0	0			REV__ENST00000557787.1_1_15:89164581-89170043:+|nuORF	REV__ENST00000557787.1_1_15:89164581-89170043:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2621154785156	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.89962	1	8270	8270		38.806	0	1	4732500	+		26662	22437	17972	17982	30389	30389					0.05435722848869773
LESVRGRP	8	Unmodified	_LESVRGRP_					0	0	0			REV__ENST00000557787.1_1_15:89164581-89170043:+|nuORF	REV__ENST00000557787.1_1_15:89164581-89170043:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2635498046875	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.87479	1	7519	7519		30.504	0.6621	1	1262800	+		26663	22437	17972	17982	30390	30390					0.05435722848869773
LESVRGRP	8	Unmodified	_LESVRGRP_					0	0	0			REV__ENST00000557787.1_1_15:89164581-89170043:+|nuORF	REV__ENST00000557787.1_1_15:89164581-89170043:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2633056640625	2	457.264333	912.514114	-0.11988	-5.4815E-05	0.13028	5.9574E-05	0.010409	4.7595E-06	457.26428644836	79.385	2.7838	79.935	78.442	81.226	0.54945					170	65	4	0	0	0	0.9295	1	9101	9101		55.504	3.205	1	1064700	+		26664	22437	17972	17982	30391	30391					0.05435722848869773
LETEPAVV	8	Unmodified	_LETEPAVV_					0	0	0			REV__nc|ENSG00000167244|P01344-3|IGF2	REV__nc|ENSG00000167244|P01344-3|IGF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.2355041503906	2	429.234376	856.454199	0.92963	0.00039903	2.1115	0.00090634	3.0411	0.0013054	429.2351427168519	63.189	2.3191	63.218	62.635	64.954	0.028133					251	82	4	0	0	0	0.86288	1	5928	5928		26.796	1.3459	1	5799800	+		26665	15490	17973	17983	30392	30392					0.020229873949688226
LETGIKSK	8	Unmodified	_LETGIKSK_					0	0	0		nc|ENSG00000163349|Q86Z02-4|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;ENSG00000163349|ENST00000426820|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2676086425781	2	438.263468	874.512382	-0.55422	-0.0002429	-0.15128	-6.6299E-05	-0.7055	-0.00030919	438.2633129706434	52.51	0.37921	52.436	52.349	52.728	-0.074509					13	10	2	0	0	0	0.4196	1	4266	4266		42.396	3.59	1	50985			26666	5785	17974	17984	30393	30393					0.07010669040232642
LETGPPMG	8	Unmodified	_LETGPPMG_					0	0	0		ENSG00000136931|ENST00000373588|NR5A1	ENSG00000136931|ENST00000373588|NR5A1	ENSG00000136931|ENST00000373588|NR5A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	401.1937255859375	2	401.194196	800.37384	-1.8254	-0.00073232	-0.89731	-0.00035999	-2.7227	-0.0010923	401.1938597334581	82.198	0.79889	82.353	81.873	82.672	0.15473					36	18	3	0	0	0	0.81548	1	7906	7906		20.482	0	1	194470			26667	4159	17975	17985	30394	30394					-0.034331971997289656
LETIKKEKELI	11	Unmodified	_LETIKKEKELI_					0	0	0			REV__nc|ENSG00000009780|Q8TAV0-5|FAM76A	REV__nc|ENSG00000009780|Q8TAV0-5|FAM76A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6093444824219	3	448.609666	1342.80717	-1.3621	-0.00061104	0.77548	0.00034789	-0.58659	-0.00026315	448.6097970890054	75.668	1.3969	75.668	74.988	76.385	0					143	49	4	0	0	0	0.77511	1	6839	6839		16.53	3.5724	1	388770	+		26668	16152	17976	17986	30395	30395					0.14947612668538568
LETIKKEKELI	11	Unmodified	_LETIKKEKELI_					0	0	0			REV__nc|ENSG00000009780|Q8TAV0-5|FAM76A	REV__nc|ENSG00000009780|Q8TAV0-5|FAM76A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.94305419921875	3	448.609666	1342.80717	-1.3368	-0.0005997	0.67799	0.00030415	-0.65881	-0.00029555	448.60975879741926	77.285	1.2875	77.285	77.023	78.311	0					128	61	3	0	0	0	0.79224	1	7045	7045		12.957	0	1	598490	+		26669	16152	17976	17986	30396	30396					0.14947612668538568
LETIKKEKELI	11	Unmodified	_LETIKKEKELI_					0	0	0			REV__nc|ENSG00000009780|Q8TAV0-5|FAM76A	REV__nc|ENSG00000009780|Q8TAV0-5|FAM76A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.94287109375	3	448.609666	1342.80717	-0.14494	-6.5021E-05	-0.76422	-0.00034284	-0.90916	-0.00040786	448.9437169224278	77.071	0.84238	77.124	76.655	77.498	0.052704					75	41	2	0	0	0	0.73277	1	7464	7464		25.892	6.2648	1	780830	+		26670	16152	17976	17986	30397	30397					0.14947612668538568
LETIQLPLE	9	Unmodified	_LETIQLPLE_					0	0	0		ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6	ENSG00000124587|ENST00000304611|PEX6	ENSG00000124587|ENST00000304611|PEX6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.302978515625	2	528.30279	1054.59103	-0.48442	-0.00025592	0.35616	0.00018816	-0.12826	-6.776E-05	528.3027239654247	58.167	1.0966	58.56	57.929	59.025	0.39342					42	26	2	0	0	0	0.30689	1	6086	6086		64.207	0.67341	1	1052300			26671	3346	17977	17987	30398	30398					0.06591476554672226
LETIQLPLE	9	Unmodified	_LETIQLPLE_					0	0	0		ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6	ENSG00000124587|ENST00000304611|PEX6	ENSG00000124587|ENST00000304611|PEX6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.3037719726562	2	528.30279	1054.59103	0.43434	0.00022946	-0.48639	-0.00025696	-0.05205	-2.7498E-05	528.3023261653867	58.048	0.81956	58.602	58.228	59.047	0.55323					35	19	2	0	0	0	0.36616	1	6084	6084		60.118	3.6845	1	1113300			26672	3346	17977	17987	30399	30399					0.06591476554672226
LETIVLDVLEP	11	Unmodified	_LETIVLDVLEP_					0	0	0			REV__nc|ENSG00000115211|Q9UI10-3|EIF2B4	REV__nc|ENSG00000115211|Q9UI10-3|EIF2B4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.54534912109375	3	414.23935	1239.69622	0.471	0.00019511	2.8177	0.0011672	3.2887	0.0013623	414.2403806930836	51.748	0.2464	52.415	52.23	52.477	0.66729					9	5	2	0	0	0	0.17347	1	5179	5179		15.337	0	1	204970	+		26673	18093	17978	17988	30400	30400					0.08595972960438303
LETKRRMR	8	Unmodified	_LETKRRMR_					0	0	0			REV__ENSG00000156650|ENST00000287239|KAT6B	REV__ENSG00000156650|ENST00000287239|KAT6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3165893554688	2	545.319117	1088.62368	-0.53242	-0.00029034	-3.9751	-0.0021677	-4.5075	-0.002458	545.3168302794771	93.277	0.88976	93.727	93.4	94.289	0.44988					49	20	3	0	0	0	0.93293	1	11160	11160		51.335	8.4712	1	539260	+		26674	20500	17979	17989	30401	30401					0.08291405196519008
LETKSLPSRSP	11	Unmodified	_LETKSLPSRSP_					0	0	0		nc|ENSG00000070159|P26045-2|PTPN3;ENSG00000070159|ENST00000374541|PTPN3	nc|ENSG00000070159|P26045-2|PTPN3	nc|ENSG00000070159|P26045-2|PTPN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5636901855469	3	405.562827	1213.66665	0.39528	0.00016031	4.3969	0.0017832	4.7922	0.0019435	405.56450530615757	63.272	1.3532	63.394	62.754	64.107	0.12253					138	58	3	0	0	0	0.69931	1	5565	5565		22.781	0	1	242080			26675	1233	17980	17990	30402	30402					0.0683645373494528
LETLDDFAG	9	Unmodified	_LETLDDFAG_					0	0	0			REV__ENSG00000136457|ENST00000508540|CHAD	REV__ENSG00000136457|ENST00000508540|CHAD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.8157653808594	2	490.732197	979.449842	-0.11176	-5.4842E-05	0.21747	0.00010672	0.10571	5.1875E-05	490.73221320095854	73.245	0.52655	73.799	73.397	73.923	0.55386					22	14	2	0	0	0	0.20789	1	8206	8206		34.173	9.6534	1	377700	+		26676	19312	17981	17991	30403	30403					-0.04070521818607631
LETLPGYGS	9	Unmodified	_LETLPGYGS_					0	0	0			REV__ENST00000557543.5_1_14:23299153-23299471:+|nuORF	REV__ENST00000557543.5_1_14:23299153-23299471:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7232971191406	2	468.737283	935.460012	-0.030145	-1.413E-05	1.863	0.00087325	1.8328	0.00085912	468.73655473256633	86.741	0.28655	87.187	87.02	87.306	0.44628					10	6	2	0	0	0	0.20789	1	10172	10172		21.96	11.695	1	48097	+		26677	21845	17982	17992	30404	30404					-0.010299140933625495
LETLVDHTL	9	Unmodified	_LETLVDHTL_					0	0	0			REV__nc|ENSG00000144481|Q7Z2W7-4|TRPM8	REV__nc|ENSG00000144481|Q7Z2W7-4|TRPM8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	520.6507568359375	2	520.784764	1039.55498	-0.042687	-2.2231E-05	-1.1741	-0.00061144	-1.2168	-0.00063367	520.7840641768485	108.54	0.75237	108.49	108.26	109.01	-0.042404					57	29	3	0	0	0	0.20789	1	11870	11870		37.159	8.0096	1	2273400	+		26678	19894	17983	17993	30405	30405					0.03678019377821329
LETNILKMTTP	11	Unmodified	_LETNILKMTTP_					0	0	0		ENST00000502562.5_1_4:145954424-146019337:-|nuORF	ENST00000502562.5_1_4:145954424-146019337:-|nuORF	ENST00000502562.5_1_4:145954424-146019337:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	630.8502197265625	2	630.847039	1259.67952	2.85	0.0017979	1.449	0.00091407	4.2989	0.002712	630.8477214787887	110.77	1.3958	110.74	110.48	111.87	-0.026314					127	46	4	0	0	0	0.75164	1	12310	12310		21.686	0.73882	1	751460			26679	12857	17984	17994	30406	30406					0.060071488028142994
LETNKLRNVAK	11	Unmodified	_LETNKLRNVAK_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4058227539062	2	643.382968	1284.75138	-0.029224	-1.8802E-05	-2.8532	-0.0018357	-2.8825	-0.0018545	643.3812570526272	105.98	0.19604	105.96	105.78	105.97	-0.025146					6	4	2	0	0	0	0.17431	1	11465	11465		31.53	1.2121	1	148820			26680	5811	17985	17995	30407	30407					0.1203982427155097
LETPGIMP	8	Unmodified	_LETPGIMP_					0	0	0			REV__nc|ENSG00000165246|Q8NFZ3|NLGN4Y	REV__nc|ENSG00000165246|Q8NFZ3|NLGN4Y	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.23577880859375	2	429.225497	856.43644	0.92295	0.00039615	-2.1766	-0.00093423	-1.2536	-0.00053808	429.2244334214988	62.993	0.088612	63.021	62.991	63.08	0.028133					5	3	2	0	0	0	0.4196	1	5893	5893		8.8223	0.59103	1	21202	+		26681	15956	17986	17996	30408	30408					0.002479488684457465
LETPSLVPVKK	11	Unmodified	_LETPSLVPVKK_					0	0	0		ENSG00000204569|ENST00000376511|PPP1R10	ENSG00000204569|ENST00000376511|PPP1R10	ENSG00000204569|ENST00000376511|PPP1R10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.87255859375	2	605.873914	1209.73327	-0.046166	-2.7971E-05	-3.0583	-0.0018529	-3.1044	-0.0018809	605.8718844200029	100.18	2.006	100.22	99.762	101.77	0.046349					129	46	5	0	0	0	0.70737	1	10746	10746		30.318	1.1477	1	1666000			26682	8460	17987	17997	30409	30409					0.13679689296827746
LETPTDPQ	8	Unmodified	_LETPTDPQ_					0	0	0			REV__ENST00000555208.1_1_14:77796520-77797535:+|nuORF	REV__ENST00000555208.1_1_14:77796520-77797535:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.248046875	2	450.71909	899.423627	-0.076274	-3.4378E-05	0.39566	0.00017833	0.31939	0.00014395	450.72021686413325	67.584	0.37341	67.614	67.449	67.823	0.030563					14	12	2	0	0	0	0.4196	1	6412	6412		17.365	6.4994	1	48925	+		26683	17202	17988	17998	30410	30410					-0.03010790990094847
LETQVTIGYGF	11	Unmodified	_LETQVTIGYGF_					0	0	0		ENSG00000151704|ENST00000392666|KCNJ1;nc|ENSG00000151704|P48048-3|KCNJ1;nc|ENSG00000151704|P48048|KCNJ1	ENSG00000151704|ENST00000392666|KCNJ1	ENSG00000151704|ENST00000392666|KCNJ1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	409.8455810546875	3	409.880044	1226.6183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.41	1	117.41	116.91	117.91	0								0	0	0	0.56276	1	11994	11994		23.378	1.6922	1				26684	5138	17989	17999	30411	30411					0.014059600950531603
LETRRRRRRRR	11	Unmodified	_LETRRRRRRRR_					0	0	0			REV__ENST00000396212.6_1_16:19535261-19535342:+|nuORF	REV__ENST00000396212.6_1_16:19535261-19535342:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	537.8567504882812	3	537.671873	1609.99379	-0.089829	-4.8299E-05	1.9277	0.0010365	1.8379	0.00098817	537.6727957730443	16.386	0.1331	16.434	16.351	16.484	0.047802					8	5	2	0	0	0	0.18421	1	150	150		1.4188	1.0473	1	22420	+		26685	26138	17990	18000	30412	30412					0.21319131910740907
LETSALLAL	9	Unmodified	_LETSALLAL_					0	0	0			REV__ENST00000475185.5_1_18:20877516-20877840:-|nuORF	REV__ENST00000475185.5_1_18:20877516-20877840:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.777587890625	2	465.778951	929.543348	-1.2002	-0.00055902	-1.7507	-0.00081543	-2.9509	-0.0013744	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.72402	1	7652	7652		38.806	0	1	683640	+		26686	27315	17991	18001	30413	30413					0.07575822354453976
LETSVPTP	8	Unmodified	_LETSVPTP_					0	0	0			REV__ENSG00000132952|ENST00000255304|USPL1	REV__ENSG00000132952|ENST00000255304|USPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2279357910156	2	422.226551	842.438549	-0.30034	-0.00012681	3.9543	0.0016696	3.654	0.0015428	422.22807899048587	64.416	1.0603	64.382	64.026	65.086	-0.034248					75	29	3	0	0	0	0.86288	1	6144	6144		26.796	0	1	581950	+		26687	19046	17992	18002	30414	30414					0.011027008779137759
LETTIINKVF	10	Unmodified	_LETTIINKVF_					0	0	0			REV__ENST00000546999.5_1_12:96374470-96386548:-|nuORF	REV__ENST00000546999.5_1_12:96374470-96386548:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3429565429688	2	589.344989	1176.67542	0.83312	0.00049099	-4.3931	-0.002589	-3.5599	-0.002098	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.80179	1	9763	9763		39.253	5.0803	1	20363000	+		26688	16869	17993	18003	30415	30415					0.09415427371413898
LETTIINKVF	10	Unmodified	_LETTIINKVF_					0	0	0			REV__ENST00000546999.5_1_12:96374470-96386548:-|nuORF	REV__ENST00000546999.5_1_12:96374470-96386548:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3423461914062	2	589.344989	1176.67542	-1.324	-0.0007803	-2.248	-0.0013248	-3.572	-0.0021051	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.8608	1	9412	9412		34.173	5.023	1	17904000	+		26689	16869	17993	18003	30416	30416					0.09415427371413898
LETTVILPE	9	Unmodified	_LETTVILPE_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7894592285156	2	507.789515	1013.56448	-1.0315	-0.0005238	-1.2586	-0.00063912	-2.2902	-0.0011629	508.29154489892346	30.448	0.57509	30.477	30.185	30.76	0.028618					29	12	4	0	0	0	0.62081	1	1985	1985		45.952	3.5558	1	158870			26690	4602	17994	18004	30417	30417					0.05823787663348412
LETTVILPE	9	Unmodified	_LETTVILPE_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	507.789515	1013.56448	0.46559	0.00023642	-0.29883	-0.00015174	0.16676	8.468E-05	507.79074706041075	30.234	0.063868	30.232	30.184	30.247	-0.0022526	-0.12238	6.6603E-05	NaN	45.952	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18987			26691	4602	17994	18004							0.05823787663348412
LETVLRLM	8	Unmodified	_LETVLRLM_					0	0	0			REV__ENSG00000182771|ENST00000327946|GRID1	REV__ENSG00000182771|ENST00000327946|GRID1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7913513183594	2	487.788795	973.563038	-0.24073	-0.00011743	4.0932	0.0019966	3.8524	0.0018792	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.89962	1	9824	9824		38.806	5.2906	1	1981400	+		26692	22548	17995	18005	30418	30418					0.07519875093578321
LETVREEF	8	Unmodified	_LETVREEF_					0	0	0		nc|ENSG00000152953|Q9NY57-2|STK32B;ENSG00000152953|ENST00000282908|STK32B	nc|ENSG00000152953|Q9NY57-2|STK32B	nc|ENSG00000152953|Q9NY57-2|STK32B	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.753662109375	2	511.761289	1021.50803	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.109	1	67.495	66.995	67.995	0.38515								0	0	0	0.29245	1	7340	7340		30.504	2.6214	1				26693	5204	17996	18006	30419	30419					-0.0018684017333043812
LETYENAR	8	Unmodified	_LETYENAR_					0	0	0		ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2831726074219	2	498.243264	994.471974	-0.259	-0.00012904	0.077912	3.8819E-05	-0.18109	-9.0225E-05	498.24324039874284	32.996	0.54979	33.166	32.976	33.526	0.16971					21	12	2	0	0	0	0.4196	1	2361	2361		47.916	0	1	258430			26694	1902	17997	18007	30420	30420					-0.025482973501880224
LEVAEGWSAMA	11	Unmodified	_LEVAEGWSAMA_					0	0	0		ENST00000414209.5_1_X:73164481-73166919:+|nuORF	ENST00000414209.5_1_X:73164481-73166919:+|nuORF	ENST00000414209.5_1_X:73164481-73166919:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3524780273438	2	582.273706	1162.53286	3.0378	0.0017689	-3.1778	-0.0018503	-0.13993	-8.1477E-05	582.2714108591603	104.28	0.29839	104.5	104.38	104.68	0.2268					9	6	2	0	0	0	0.16822	1	12742	12742		44.377	10.205	1	47197			26695	11362	17998	18008	30421	30421					-0.041905283622554634
LEVDKDEAL	9	Unmodified	_LEVDKDEAL_					0	0	0		ENSG00000160218|ENST00000291574|TRAPPC10	ENSG00000160218|ENST00000291574|TRAPPC10	ENSG00000160218|ENST00000291574|TRAPPC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2650756835938	2	516.266404	1030.51826	-0.30471	-0.00015731	-0.22624	-0.0001168	-0.53094	-0.00027411	516.266175157202	45.302	0.48746	45.765	45.513	46	0.46313					19	11	2	0	0	0	0.17181	1	4215	4215		79.713	2.9384	1	642710			26696	5568	17999	18009	30422	30422					0.004217227612343777
LEVDKDEAL	9	Unmodified	_LEVDKDEAL_					0	0	0		ENSG00000160218|ENST00000291574|TRAPPC10	ENSG00000160218|ENST00000291574|TRAPPC10	ENSG00000160218|ENST00000291574|TRAPPC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2656860351562	2	516.266404	1030.51826	-0.7088	-0.00036593	0.47854	0.00024706	-0.23026	-0.00011888	516.2664147069039	45.068	0.56936	45.912	45.667	46.236	0.84438					29	13	3	0	0	0	0.24527	1	4204	4204		69.628	8.6557	1	617380			26697	5568	17999	18009	30423	30423					0.004217227612343777
LEVDPLGT	8	Unmodified	_LEVDPLGT_					0	0	0			REV__ENSG00000128271|ENST00000337539|ADORA2A	REV__ENSG00000128271|ENST00000337539|ADORA2A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2265625	2	422.226551	842.438549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.903	1	62.011	61.511	62.511	0.10743								0	0	0	0.29631	1	5384	5384		25.45	1.2474	1		+		26698	18765	18000	18010	30424	30424					0.011027008779137759
LEVEFTLPL	9	Unmodified	_LEVEFTLPL_					0	0	0		ENST00000535834.1_1_19:16254538-16262324:+|nuORF	ENST00000535834.1_1_19:16254538-16262324:+|nuORF	ENST00000535834.1_1_19:16254538-16262324:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.7969970703125	2	530.799883	1059.58521	1.4661	0.00077821	1.0158	0.00053917	2.4819	0.0013174	530.8004854183959	89.778	0.62534	90.229	89.944	90.57	0.45058					31	17	2	0	0	0	0.51307	1	10625	10625		51.335	3.4199	1	1082800			26699	13430	18001	18011	30425	30425					0.057803780430276674
LEVERRAK	8	Unmodified	_LEVERRAK_					0	0	0			REV__ENSG00000162889|ENST00000367103|MAPKAPK2	REV__ENSG00000162889|ENST00000367103|MAPKAPK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.7985534667969	2	500.79854	999.582528	-0.15132	-7.5782E-05	0.29224	0.00014636	0.14092	7.0573E-05	500.7985981494417	25.412	0.99467	25.084	24.703	25.698	-0.32825					42	22	3	0	0	0	0.66521	1	1322	1322		68.787	0	1	528020	+		26700	20860	18002	18012	30426	30426					0.08271967428709104
LEVEVIEGTL	10	Unmodified	_LEVEVIEGTL_					0	0	0		ENST00000537918.1_1_11:64084335-64084637:-|nuORF;nc|ENSG00000173113|Q9UI30-2|TRMT112;ENSG00000173113|ENST00000544844|TRMT112	ENST00000537918.1_1_11:64084335-64084637:-|nuORF	ENST00000537918.1_1_11:64084335-64084637:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.3053588867188	2	551.305529	1100.59651	-0.97843	-0.00053942	0.7679	0.00042335	-0.21053	-0.00011607	551.3059082127032	82.831	1.1206	83.263	82.92	84.041	0.43108					52	26	3	0	0	0	0.18173	2	9593	9593;9604		90.37	42.712	1	774920			26701	6827	18003	18013	30427;30428	30427					0.05023155346475505
LEVEVIEGTL	10	Unmodified	_LEVEVIEGTL_					0	0	0		ENST00000537918.1_1_11:64084335-64084637:-|nuORF;nc|ENSG00000173113|Q9UI30-2|TRMT112;ENSG00000173113|ENST00000544844|TRMT112	ENST00000537918.1_1_11:64084335-64084637:-|nuORF	ENST00000537918.1_1_11:64084335-64084637:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.3057250976562	2	551.305529	1100.59651	-0.015369	-8.473E-06	-0.28991	-0.00015983	-0.30528	-0.0001683	551.3052267109261	82.82	0.94948	83.294	82.836	83.785	0.47383					50	22	3	0	0	0	0.42393	2	9619	9619;9631		62.107	18.33	1	682450			26702	6827	18003	18013	30429;30430	30429					0.05023155346475505
LEVHIYRFWYI	11	Unmodified	_LEVHIYRFWYI_					0	0	0			REV__ENST00000529624.5_3_15:28916682-28918849:+|nuORF	REV__ENST00000529624.5_3_15:28916682-28918849:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.768310546875	3	513.61	1537.80817	-0.41064	-0.00021091	-2.5406	-0.0013049	-2.9512	-0.0015158	513.9429200648531	38.692	0.16618	38.703	38.591	38.757	0.010708					5	4	2	0	0	0	0.1767	1	2300	2300		24.232	9.5381	1	70828	+		26703	28270	18004	18014	30431	30431					0.060778718280744215
LEVHLVRF	8	Unmodified	_LEVHLVRF_					0	0	0		ENSG00000177992|ENST00000325643|SPATA31E1	ENSG00000177992|ENST00000325643|SPATA31E1	ENSG00000177992|ENST00000325643|SPATA31E1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7992248535156	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.351	1	43.351	42.851	43.851	0								0	0	0	0.29452	1	3069	3069		33.516	1.5607	1				26704	7173	18005	18015	30432	30432					0.08122056922422871
LEVHNEMNEV	10	Unmodified	_LEVHNEMNEV_					0	0	0		nc|ENSG00000166206|P28472-4|GABRB3;nc|ENSG00000166206|P28472-3|GABRB3;nc|ENSG00000166206|P28472-2|GABRB3;ENSG00000166206|ENST00000311550|GABRB3	nc|ENSG00000166206|P28472-4|GABRB3	nc|ENSG00000166206|P28472-4|GABRB3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.2348937988281	3	405.188772	1212.54449	-0.18282	-7.4077E-05	-0.051402	-2.0828E-05	-0.23422	-9.4905E-05	405.52426127440873	63.317	0.10619	63.283	63.207	63.313	-0.03371					5	4	2	0	0	0	0.37624	1	5996	5996		12.957	0	1	29123			26705	6171	18006	18016	30433	30433					-0.05328331338932912
LEVIIKQGCV	10	Unmodified	_LEVIIKQGCV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	551.3289794921875	2	551.32046	1100.62637	0.21855	0.00012049	-3.1472	-0.0017351	-2.9287	-0.0016146	551.3185238538034	76.545	0.66764	76.67	76.288	76.956	0.12486					52	23	4	0	0	0	0.3985	1	7158	7158		64.207	0	1	427870	+		26706	19946	18007	18017	30434	30434					0.08007815810833563
LEVIIKQGCV	10	Unmodified	_LEVIIKQGCV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	551.32046	1100.62637	-0.82961	-0.00045738	-2.0278	-0.0011179	-2.8574	-0.0015753	551.3190821910542	76.963	0.4963	76.963	76.607	77.104	0	0.23667	0.00093496	NaN	64.207	45	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	262690	+		26707	19946	18007	18017							0.08007815810833563
LEVIIKQGCV	10	Unmodified	_LEVIIKQGCV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	551.32046	1100.62637	-0.64674	-0.00035656	-2.6496	-0.0014608	-3.2963	-0.0018173	551.3187080149615	76.832	0.48998	76.881	76.54	77.03	0.049194	0.15535	0.00024931	NaN	64.207	33	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133940	+		26708	19946	18007	18017							0.08007815810833563
LEVIIKQGCV	10	Unmodified	_LEVIIKQGCV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	551.32046	1100.62637	0.47412	0.00026139	-3.5438	-0.0019538	-3.0697	-0.0016924	551.3181993200786	76.75	0.5538	76.702	76.309	76.863	-0.048271	-0.023959	-0.00073672	NaN	64.207	35	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165700	+		26709	19946	18007	18017							0.08007815810833563
LEVIIKQGCV	10	Unmodified	_LEVIIKQGCV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	551.32046	1100.62637	0.44997	0.00024808	-3.5783	-0.0019728	-3.1284	-0.0017247	551.3182321645048	76.587	0.60612	76.635	76.226	76.832	0.047981	-0.090841	-0.00077475	NaN	64.207	45	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172230	+		26710	19946	18007	18017							0.08007815810833563
LEVIIKQGCV	10	Unmodified	_LEVIIKQGCV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	551.32046	1100.62637	0.21855	0.00012049	-3.1472	-0.0017351	-2.9287	-0.0016146	551.3185238538034	76.545	0.66764	76.67	76.288	76.956	0.12486	-0.056146	-0.0002994	NaN	64.207	52	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	427870	+		26711	19946	18007	18017							0.08007815810833563
LEVIIKQGCV	10	Unmodified	_LEVIIKQGCV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	551.32046	1100.62637	0.63406	0.00034957	-3.7231	-0.0020526	-3.0891	-0.0017031	551.3182059354369	76.522	0.58246	76.656	76.297	76.879	0.13478	-0.069463	-0.00093441	NaN	64.207	50	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	360530	+		26712	19946	18007	18017							0.08007815810833563
LEVIIKQGCV	10	Unmodified	_LEVIIKQGCV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	551.32046	1100.62637	-1.0443	-0.00057574	-1.7751	-0.00097865	-2.8194	-0.0015544	551.3191692063983	76.605	0.60045	76.694	76.318	76.918	0.089363	-0.031835	0.0012136	NaN	64.207	54	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	357780	+		26713	19946	18007	18017							0.08007815810833563
LEVIIKQGCV	10	Unmodified	_LEVIIKQGCV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	551.32046	1100.62637	-0.37412	-0.00020626	-2.8151	-0.001552	-3.1892	-0.0017583	551.3187585356296	76.297	0.54176	76.697	76.326	76.868	0.39969	-0.028914	6.6789E-05	NaN	64.207	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	163530	+		26714	19946	18007	18017							0.08007815810833563
LEVIIKQGCV	10	Unmodified	_LEVIIKQGCV_					0	0	0			REV__ENSG00000145428|ENST00000347063|RNF175	REV__ENSG00000145428|ENST00000347063|RNF175	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	551.32046	1100.62637	-0.17614	-9.7109E-05	-3.4375	-0.0018952	-3.6137	-0.0019923	551.3186267211245	76.067	0.66106	76.635	76.31	76.971	0.56836	-0.09086	-0.00061951	NaN	64.207	33	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	177400	+		26715	19946	18007	18017							0.08007815810833563
LEVKQEEVV	9	Unmodified	_LEVKQEEVV_					0	0	0		ENSG00000055813|ENST00000407595|CCDC85A	ENSG00000055813|ENST00000407595|CCDC85A	ENSG00000055813|ENST00000407595|CCDC85A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.794921875	2	536.797872	1071.58119	-1.3657	-0.00073313	0.52527	0.00028197	-0.84047	-0.00045116	536.7980220344277	47.328	0.86889	48.252	47.915	48.784	0.92315					58	21	4	0	0	0	0.044173	1	4509	4509		110.12	3.1124	1	4699500			26716	1029	18008	18018	30435	30435					0.04826288549293167
LEVKVIPDV	9	Unmodified	_LEVKVIPDV_					0	0	0			REV__ENSG00000205784|ENST00000650722|ARRDC5	REV__ENSG00000205784|ENST00000650722|ARRDC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3074035644531	2	506.307875	1010.6012	-0.17528	-8.8744E-05	2.9421	0.0014896	2.7668	0.0014009	506.3094556948668	48.133	0.75604	48.04	47.615	48.371	-0.093178					26	19	2	0	0	0	0.78983	1	3683	3683		27.882	0	1	84185	+		26717	23576	18009	18019	30436	30436					0.09632084279905939
LEVLRELPVP	10	Unmodified	_LEVLRELPVP_					0	0	0		ENSG00000186517|ENST00000368013|ARHGAP30;nc|ENSG00000186517|Q7Z6I6-4|ARHGAP30;ENST00000461003.5_1_1:161022982-161039420:-|nuORF;nc|ENSG00000186517|Q7Z6I6-2|ARHGAP30	ENSG00000186517|ENST00000368013|ARHGAP30	ENSG00000186517|ENST00000368013|ARHGAP30	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8563842773438	2	582.852981	1163.69141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.76	1	112.74	112.24	113.24	-0.024811								0	0	0	0.45132	1	12466	12466		31.53	2.3803	1				26718	7801	18010	18020	30437	30437					0.1161113360831223
LEVLSILEP	9	Unmodified	_LEVLSILEP_					0	0	0			REV__ENSG00000164880|ENST00000404767|INTS1	REV__ENSG00000164880|ENST00000404767|INTS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7996826171875	2	506.799883	1011.58521	0.2762	0.00013998	1.6463	0.00083435	1.9225	0.00097432	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.78058	1	3286	3286		30.504	0	1	416790	+		26719	21124	18011	18021	30438	30438					0.0798837804301229
LEVLSILEP	9	Unmodified	_LEVLSILEP_					0	0	0			REV__ENSG00000164880|ENST00000404767|INTS1	REV__ENSG00000164880|ENST00000404767|INTS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3164978027344	2	506.799883	1011.58521	0.18166	9.2065E-05	2.1338	0.0010814	2.3155	0.0011735	506.80111823451307	58.894	0.97717	58.864	58.25	59.227	-0.030888					47	30	2	0	0	0	0.20789	1	5537	5537		15.642	1.5047	1	52582	+		26720	21124	18011	18021	30439	30439					0.0798837804301229
LEVLSILEP	9	Unmodified	_LEVLSILEP_					0	0	0			REV__ENSG00000164880|ENST00000404767|INTS1	REV__ENSG00000164880|ENST00000404767|INTS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.79998779296875	2	506.799883	1011.58521	0.38439	0.00019481	2.2887	0.0011599	2.6731	0.0013547	506.80097431464225	53.444	1.0595	53.515	53.221	54.281	0.070709					58	27	3	0	0	0	0.78536	1	4451	4451		29.15	2.4566	1	177670	+		26721	21124	18011	18021	30440	30440					0.0798837804301229
LEVLSILEP	9	Unmodified	_LEVLSILEP_					0	0	0			REV__ENSG00000164880|ENST00000404767|INTS1	REV__ENSG00000164880|ENST00000404767|INTS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	506.799883	1011.58521	-0.058891	-2.9846E-05	3.1555	0.0015992	3.0966	0.0015694	506.80141713102034	58.977	0.245	58.963	58.77	59.015	-0.013729	0.049856	0.00072349	NaN	15.642	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45544	+		26722	21124	18011	18021							0.0798837804301229
LEVLSTEPGS	10	Unmodified	_LEVLSTEPGS_					0	0	0		ENSG00000150667|ENST00000350221|FSIP1	ENSG00000150667|ENST00000350221|FSIP1	ENSG00000150667|ENST00000350221|FSIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2651977539062	2	516.266404	1030.51826	-0.30471	-0.00015731	-0.22624	-0.0001168	-0.53094	-0.00027411	516.266175157202	45.302	0.48746	45.765	45.513	46	0.46313					19	11	2	0	0	0	0.3985	1	4205	4205		64.207	5.4253	1	642710			26723	5077	18012	18022	30441	30441					0.004217227612343777
LEVLSVCELV	10	Unmodified	_LEVLSVCELV_					0	0	0			REV__ENSG00000198931|ENST00000378364|APRT	REV__ENSG00000198931|ENST00000378364|APRT	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3054809570312	2	552.304475	1102.5944	0.23974	0.00013241	2.8443	0.0015709	3.0841	0.0017033	552.3064417518009	81.24	1.293	81.385	80.397	81.69	0.14513					35	31	2	0	0	0	0.37624	1	7725	7725		31.53	0	1	61162	+		26724	23420	18013	18023	30442	30442					0.04720403337000789
LEVLVLVLVV	10	Unmodified	_LEVLVLVLVV_					0	0	0			REV__ENST00000437416.2_2_1:224803315-224803363:-|nuORF	REV__ENST00000437416.2_2_1:224803315-224803363:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.373779296875	2	548.373018	1094.73148	-0.47019	-0.00025784	2.7651	0.0015163	2.2949	0.0012584	548.3743331690392	35.442	1.0652	35.43	35	36.065	-0.012203					66	23	4	0	0	0	0.85438	2	2231	2219;2231		23.042	4.9621	1	555000	+		26725	26706	18014	18024	30443;30444	30444					0.18790680278880245
LEVLVLVLVV	10	Unmodified	_LEVLVLVLVV_					0	0	0			REV__ENST00000437416.2_2_1:224803315-224803363:-|nuORF	REV__ENST00000437416.2_2_1:224803315-224803363:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3751220703125	2	548.373018	1094.73148	-0.26655	-0.00014617	2.6931	0.0014768	2.4265	0.0013306	548.374310727377	37.412	2.4822	37.359	36.203	38.685	-0.053558					161	55	4	0	0	0	0.85939	1	2606	2606		23.042	5.6775	1	654980	+		26726	26706	18014	18024	30445	30445					0.18790680278880245
LEVPLPTK	8	Unmodified	_LEVPLPTK_					0	0	0		ENST00000550504.5_1_17:40282572-40288294:-|nuORF;ENST00000552162.5_1_17:40282572-40288397:-|nuORF	ENST00000550504.5_1_17:40282572-40288294:-|nuORF	ENST00000550504.5_1_17:40282572-40288294:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.7776794433594	2	448.776211	895.537869	-1.4107	-0.00063308	4.4433	0.0019941	3.0326	0.001361	448.7781260236316	72.302	1.1681	72.302	71.823	72.992	0					77	49	2	0	0	0	0.8621	1	6471	6471		26.693	2.4902	1	136900			26727	13657	18015	18025	30446	30446					0.08592143562657384
LEVPLPTK	8	Unmodified	_LEVPLPTK_					0	0	0		ENST00000550504.5_1_17:40282572-40288294:-|nuORF;ENST00000552162.5_1_17:40282572-40288397:-|nuORF	ENST00000550504.5_1_17:40282572-40288294:-|nuORF	ENST00000550504.5_1_17:40282572-40288294:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.77777099609375	2	448.776211	895.537869	-0.17419	-7.8172E-05	2.3307	0.001046	2.1565	0.00096779	448.77710905319276	42.805	1.4607	42.755	42.147	43.608	-0.050308					82	39	3	0	0	0	0.87922	1	2908	2908		31.955	1.4512	1	258910			26728	13657	18015	18025	30447	30447					0.08592143562657384
LEVRHTRLLYK	11	Unmodified	_LEVRHTRLLYK_					0	0	0		ENST00000539644.5_1_12:124496164-124496395:+|nuORF	ENST00000539644.5_1_12:124496164-124496395:+|nuORF	ENST00000539644.5_1_12:124496164-124496395:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.62432861328125	3	476.620899	1426.84087	2.8112	0.0013399	3.054	0.0014556	5.8652	0.0027955	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.74771	2	13036	12885;13036		22.562	5.3948	1	2689700			26729	13479	18016	18026	30448;30449	30449					0.1445207895094427
LEVRHTRLLYK	11	Unmodified	_LEVRHTRLLYK_					0	0	0		ENST00000539644.5_1_12:124496164-124496395:+|nuORF	ENST00000539644.5_1_12:124496164-124496395:+|nuORF	ENST00000539644.5_1_12:124496164-124496395:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	476.620899	1426.84087	-1.6911	-0.00080601	7.8049	0.00372	6.1138	0.002914	476.6245636799804	113.21	0.20975	113.18	113.01	113.22	-0.032333	0.16848	0.0065588	NaN	22.562	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1513300			26730	13479	18016	18026							0.1445207895094427
LEVRLLRFLLE	11	Unmodified	_LEVRLLRFLLE_					0	0	0		ENST00000379958.2_1_7:92735396-92747190:-|nuORF	ENST00000379958.2_1_7:92735396-92747190:-|nuORF	ENST00000379958.2_1_7:92735396-92747190:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.2447204589844	3	467.62565	1399.85512	-0.8892	-0.00041581	-3.2298	-0.0015104	-4.119	-0.0019262	467.62404320779456	104.99	1.1463	104.99	104.79	105.93	0					49	26	3	0	0	0	0.17784	1	10886	10886		22.562	1.5294	1	83758			26731	10907	18017	18027	30450	30450					0.17118731379264318
LEVRRLSA	8	Unmodified	_LEVRRLSA_					0	0	0			REV__nc|ENSG00000184640|Q9UHD8-7|SEPTIN9	REV__nc|ENSG00000184640|Q9UHD8-7|SEPTIN9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28759765625	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.8347	1	9975	9975		23.042	0	1	48696000	+		26732	22697	18018	18028	30451	30451					0.0874858239999412
LEVRSLVG	8	Unmodified	_LEVRSLVG_					0	0	0			REV__ENSG00000170832|ENST00000300896|USP32	REV__ENSG00000170832|ENST00000300896|USP32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.763427734375	2	436.763635	871.512717	1.7626	0.00076985	-0.96852	-0.00042301	0.79409	0.00034683	436.7629205376576	26.512	1.1482	26.479	25.815	26.963	-0.032125					62	27	3	0	0	0	0.89962	1	1144	1144		38.806	1.647	1	159520	+		26733	21690	18019	18029	30452	30452					0.07182088760112038
LEVSNSPLS	9	Unmodified	_LEVSNSPLS_					0	0	0		ENSG00000181192|ENST00000263035|DHTKD1	ENSG00000181192|ENST00000263035|DHTKD1	ENSG00000181192|ENST00000263035|DHTKD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.262451171875	2	473.248015	944.481476	-0.25967	-0.00012289	0.32175	0.00015227	0.06208	2.9379E-05	473.2481063617417	28.965	1.9145	28.925	28.439	30.354	-0.039907					103	58	4	0	0	0	0.76764	1	1459	1459		34.173	0	1	555530			26734	7375	18020	18030	30453	30453					0.00701470935348425
LEVTLIKLC	9	Unmodified	_LEVTLIKLC_					0	0	0			REV__ENSG00000172869|ENST00000539542|DMXL1	REV__ENSG00000172869|ENST00000539542|DMXL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3128662109375	2	516.312103	1030.60965	0.62952	0.00032503	2.569	0.0013264	3.1985	0.0016514	516.313424955158	31.968	1.9583	32.075	31.334	33.292	0.10707					88	45	3	0	0	0	0.67345	1	2181	2181		42.396	5.237	1	546410	+		26735	21860	18021	18031	30454	30454					0.09557314924882121
LEVTLIKLC	9	Unmodified	_LEVTLIKLC_					0	0	0			REV__ENSG00000172869|ENST00000539542|DMXL1	REV__ENSG00000172869|ENST00000539542|DMXL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	516.312103	1030.60965	0.19618	0.00010129	4.5229	0.0023352	4.7191	0.0024365	516.3141319433767	31.695	0.75654	31.806	31.472	32.229	0.11117	-0.24931	0.0015854	NaN	42.396	51	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97229	+		26736	21860	18021	18031							0.09557314924882121
LEVTLIKLC	9	Unmodified	_LEVTLIKLC_					0	0	0			REV__ENSG00000172869|ENST00000539542|DMXL1	REV__ENSG00000172869|ENST00000539542|DMXL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	516.312103	1030.60965	0.42181	0.00021779	2.9126	0.0015038	3.3345	0.0017216	516.3138191753379	32.131	0.8392	32.113	31.911	32.75	-0.017467	0.057858	-7.7427E-05	NaN	42.396	57	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55045	+		26737	21860	18021	18031							0.09557314924882121
LEVVAAPGS	9	Unmodified	_LEVVAAPGS_					0	0	0		ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.7344055175781	2	421.734543	841.454533	-1.1568	-0.00048785	1.2799	0.00053976	0.12308	5.1906E-05	421.7349361694888	39.674	1.2034	40.228	39.401	40.604	0.55449					55	27	3	0	0	0	0.19953	1	3329	3329		73.975	0	1	314610			26738	8159	18022	18032	30455	30455					0.02746407114818794
LEVVLLAAV	9	Unmodified	_LEVVLLAAV_					0	0	0			REV__ENST00000486740.6_1_X:101969151-101969559:+|nuORF	REV__ENST00000486740.6_1_X:101969151-101969559:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8001403808594	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	2	3099	3099;3144		26.796	1.3459	1	890090	+		26739	27559	18023	18033	30456;30457	30456					0.11905003113815837
LEVVLLAAV	9	Unmodified	_LEVVLLAAV_					0	0	0			REV__ENST00000486740.6_1_X:101969151-101969559:+|nuORF	REV__ENST00000486740.6_1_X:101969151-101969559:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.800048828125	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	2	3487	3487;3497		13.775	0	1	1294000	+		26740	27559	18023	18033	30458;30459	30458					0.11905003113815837
LEVVLLAAV	9	Unmodified	_LEVVLLAAV_					0	0	0			REV__ENST00000486740.6_1_X:101969151-101969559:+|nuORF	REV__ENST00000486740.6_1_X:101969151-101969559:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8006286621094	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.77546	1	3742	3742		31.955	1.4512	1	251610	+		26741	27559	18023	18033	30460	30460					0.11905003113815837
LEVVQQDSLV	10	Unmodified	_LEVVQQDSLV_					0	0	0			REV__ENSG00000126107|ENST00000372172|HECTD3	REV__ENSG00000126107|ENST00000372172|HECTD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.3085327148438	2	565.308603	1128.60265	0.11296	6.3858E-05	-0.68603	-0.00038782	-0.57307	-0.00032396	565.3082235409761	60.393	0.96679	60.946	60.581	61.548	0.55323					88	28	5	0	0	0	0.30722	1	6387	6387		71.877	4.3838	1	20858000	+		26742	18696	18024	18034	30461	30461					0.04349673578008151
LEWQPRRRDL	10	Unmodified	_LEWQPRRRDL_					0	0	0			REV__ENSG00000183921|ENST00000602312|SDR42E2	REV__ENSG00000183921|ENST00000602312|SDR42E2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30096435546875	3	456.921349	1367.74222	-1.2586	-0.00057509	0.43721	0.00019977	-0.82139	-0.00037531	457.2547054622179	33.735	0.32256	33.781	33.497	33.819	0.045853					13	11	2	0	0	0	0.37624	1	1652	1652		15.333	0	1	39004	+		26743	22636	18025	18035	30462	30462					0.07305475705879871
LEWRKISD	8	Unmodified	_LEWRKISD_					0	0	0		ENSG00000103540|ENST00000694978|CCP110;nc|ENSG00000103540|O43303|CCP110	ENSG00000103540|ENST00000694978|CCP110	ENSG00000103540|ENST00000694978|CCP110	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3031616210938	2	523.785099	1045.55564	-0.16998	-8.9034E-05	-1.9203	-0.0010058	-2.0903	-0.0010948	523.7844524903314	88.436	1.3237	88.643	87.591	88.915	0.20731					58	31	2	0	0	0	0.4196	1	8692	8692		34.173	3.6689	1	132050			26744	2090	18026	18036	30463	30463					0.03468858817518594
LEWRRRLKSLA	11	Unmodified	_LEWRRRLKSLA_					0	0	0		ENST00000456222.1_1_3:42605456-42610538:-|nuORF;nc|ENSG00000093183|Q9BRL7-3|SEC22C;nc|ENSG00000093183|Q9BRL7-2|SEC22C;ENSG00000093183|ENST00000264454|SEC22C	ENST00000456222.1_1_3:42605456-42610538:-|nuORF	ENST00000456222.1_1_3:42605456-42610538:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6231384277344	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.76892	1	12621	12621		17.833	4.3252	1	2577100			26745	1711	18027	18037	30464	30464					0.1557490104507906
LEWSADVLSL	10	Unmodified	_LEWSADVLSL_					0	0	0			REV__nc|ENSG00000010072|Q9H040-3|SPRTN	REV__nc|ENSG00000010072|Q9H040-3|SPRTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.7955932617188	2	566.797872	1131.58119	0.078483	4.4484E-05	-4.0395	-0.0022896	-3.961	-0.0022451	566.7955787907408	49.489	0.65429	49.949	49.665	50.32	0.45983					32	15	4	0	0	0	0.3985	1	4827	4827		64.207	5.961	1	813300	+		26746	16156	18028	18038	30465	30465					0.02066288549303863
LEYVGIEK	8	Unmodified	_LEYVGIEK_					0	0	0			REV__ENSG00000137225|ENST00000398776|CAPN11	REV__ENSG00000137225|ENST00000398776|CAPN11	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	475.76031494140625	2	475.7633	949.512048	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.791	1	24.791	24.291	25.291	0								0	0	0	0.30074	1	864	864		40.778	1.5253	1		+		26747	19371	18029	18039	30466	30466					0.03527249320381998
LFAKPHIKTL	10	Unmodified	_LFAKPHIKTL_					0	0	0			REV__ENSG00000106819|ENST00000375544|ASPN	REV__ENSG00000106819|ENST00000375544|ASPN	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	584.366943359375	2	584.366059	1166.71756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.342	1	67.342	66.842	67.842	0								0	0	0	0.45132	1	5954	5954		19.997	4.355	1		+		26748	17632	18030	18040	30467	30467					0.14087447570477707
LFALWAPL	8	Unmodified	_LFALWAPL_					0	0	0			REV__ENST00000345990.8_2_5:122848044-122848200:+|nuORF	REV__ENST00000345990.8_2_5:122848044-122848200:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.77752685546875	2	465.776014	929.537475	-0.1189	-5.538E-05	3.6166	0.0016845	3.4977	0.0016291	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.84567	1	7760	7760		24.504	0.30126	1	345200	+		26749	25318	18031	18041	30468	30468					0.06988768633448217
LFAQCQTEK	9	Carbamidomethyl (C)	_LFAQC(Carbamidomethyl (C))QTEK_	LFAQC(1)QTEK		LFAQC(46)QTEK		0	1	0		ENST00000539664.2_1_7:28994760-28994901:-|nuORF	ENST00000539664.2_1_7:28994760-28994901:-|nuORF	ENST00000539664.2_1_7:28994760-28994901:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.7714233398438	2	562.773874	1123.53319	-0.42127	-0.00023708	-2.2144	-0.0012462	-2.6357	-0.0014833	562.7727098274542	60.482	0.68708	60.872	60.569	61.256	0.38945					43	18	3	0	0	0	0.6204	1	6435	6435		45.972	8.8131	1	808750			26750	13482	18032	18042	30469	30469	181				-0.023631086424074965
LFAQSLAG	8	Unmodified	_LFAQSLAG_					0	0	0		nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2;ENSG00000188559|ENST00000202677|RALGAPA2	nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.723876953125	2	403.723978	805.433404	-1.1089	-0.00044771	1.5518	0.00062651	0.44287	0.0001788	403.7244510631445	64.933	1.6766	64.971	63.905	65.582	0.037849					135	64	4	0	0	0	0.92457	1	5755	5755		47.916	0	1	1390300			26751	7936	18033	18043	30470	30470					0.022904418059511045
LFARAAPA	8	Unmodified	_LFARAAPA_					0	0	0			REV__nc|ENSG00000167483|Q86XR2-5|NIBAN3	REV__nc|ENSG00000167483|Q86XR2-5|NIBAN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.7396545410156	2	408.739963	815.465373	0.85094	0.00034781	-1.5858	-0.00064816	-0.73482	-0.00030035	408.7393373651895	37.561	2.1469	37.572	37.24	39.387	0.011173					113	49	4	0	0	0	0.83466	1	2559	2559		23.037	0	1	272800	+		26752	21388	18034	18044	30471	30471					0.0502585427974509
LFASSYRV	8	Unmodified	_LFASSYRV_					0	0	0		ENST00000465271.5_1_1:224564504-224564564:+|nuORF	ENST00000465271.5_1_1:224564504-224564564:+|nuORF	ENST00000465271.5_1_1:224564504-224564564:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.75616455078125	2	471.75581	941.497067	-0.89746	-0.00042338	0.72418	0.00034164	-0.17328	-8.1746E-05	471.75606016299184	47.417	1.8573	47.889	47.099	48.956	0.47139					122	45	4	0	0	0	0.67263	1	4536	4536		68.485	7.5128	1	13139000			26753	12107	18035	18045	30472	30472					0.023978022430469537
LFAVREAGG	9	Unmodified	_LFAVREAGG_					0	0	0			REV__ENSG00000242732|ENST00000609883|RTL5	REV__ENSG00000242732|ENST00000609883|RTL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.2536315917969	2	460.253434	918.492316	-0.18509	-8.519E-05	0.41763	0.00019221	0.23253	0.00010702	460.25349150477365	48.345	1.4474	49.249	48.925	50.372	0.90424					63	35	3	0	0	0	0.54908	1	4696	4696		49.536	1.8787	1	1392900	+		26754	23834	18036	18046	30473	30473					0.029809181002974583
LFCALQTVF	9	Unmodified	_LFCALQTVF_					0	0	0			REV__ENSG00000219481|ENST00000430580|NBPF1	REV__ENSG00000219481|ENST00000430580|NBPF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.267822265625	2	521.275521	1040.53649	0.52129	0.00027173	-3.5077	-0.0018285	-2.9864	-0.0015567	521.27281310776	49.065	0.40481	49.969	49.887	50.292	0.90424					12	9	2	0	0	0	0.20789	1	4823	4823		49.442	13.823	1	212160	+		26755	23702	18037	18047	30474	30474					0.017841862022578425
LFDANKAEL	9	Unmodified	_LFDANKAEL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.7711486816406	2	510.771657	1019.52876	0.12554	6.412E-05	-0.41961	-0.00021432	-0.29407	-0.0001502	510.7712833695672	51.713	0.67008	52.148	51.822	52.492	0.43505					31	15	3	0	0	0	0.096326	1	5150	5150		93.143	8.2277	1	691820			26756	2832	18038	18048	30475	30475					0.01977750206322071
LFDANKAEL	9	Unmodified	_LFDANKAEL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.7705078125	2	510.771657	1019.52876	1.1571	0.00059101	-1.3654	-0.0006974	-0.20828	-0.00010638	510.7707145885715	51.514	0.54039	52.181	51.895	52.436	0.6673					27	12	3	0	0	0	0.12394	1	5135	5135		88.177	16.799	1	823330			26757	2832	18038	18048	30476	30476					0.01977750206322071
LFDHAVSKF	9	Unmodified	_LFDHAVSKF_					0	0	0		nc|ENSG00000068366|O60488|ACSL4;ENSG00000068366|ENST00000672401|ACSL4	nc|ENSG00000068366|O60488|ACSL4	nc|ENSG00000068366|O60488|ACSL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.2826538085938	2	532.282192	1062.54983	-0.487	-0.00025922	0.8048	0.00042838	0.3178	0.00016916	532.2824213520853	46.851	0.51331	47.322	47.137	47.65	0.47139					19	11	2	0	0	0	0.066118	2	4436	4436;4448		101.25	24.406	1	1099000			26758	14770	18039	18049	30477;30478	30477					0.021057603058579843
LFDITGQDF	9	Unmodified	_LFDITGQDF_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.2559204101562	2	528.25584	1054.49713	1.0239	0.00054088	-0.87836	-0.000464	0.14553	7.6878E-05	528.2552644979492	87.827	1.7191	88.276	87.685	89.405	0.44893					95	41	4	0	0	0	0.021781	4	10330	10317;10330;10343;10355		124.08	47.306	1	1710700			26759	2342	18040	18050	30479;30480;30481;30482	30480					-0.027942425476112476
LFDITGQDF	9	Unmodified	_LFDITGQDF_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.255615234375	2	528.25584	1054.49713	-0.82934	-0.00043811	0.7718	0.00040771	-0.057541	-3.0397E-05	528.2561335472199	87.909	1.6573	88.373	87.77	89.427	0.46312					96	40	4	0	0	0	0.026116	4	10356	10356;10368;10381;10393		120.87	44.532	1	2015700			26760	2342	18040	18050	30483;30484;30485;30486	30483					-0.027942425476112476
LFDITGQDF	9	Unmodified	_LFDITGQDF_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	528.25584	1054.49713	-0.03665	-1.9361E-05	-0.058197	-3.0743E-05	-0.094847	-5.0103E-05	528.2556846523273	88.061	0.52033	88.129	87.832	88.352	0.067711	-0.043559	6.1194E-05	NaN	124.08	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63114			26761	2342	18040	18050							-0.027942425476112476
LFDITGQDF	9	Unmodified	_LFDITGQDF_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	528.25584	1054.49713	1.6734	0.00088397	-1.0372	-0.0005479	0.63618	0.00033607	528.2552114198234	88.211	0.58136	88.137	87.855	88.436	-0.074005	-0.035921	-0.00097312	NaN	124.08	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79275			26762	2342	18040	18050							-0.027942425476112476
LFDITGQDF	9	Unmodified	_LFDITGQDF_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	528.25584	1054.49713	1.1184	0.0005908	-0.38836	-0.00020515	0.73004	0.00038565	528.2556805517233	87.896	0.43088	87.949	87.729	88.159	0.053024	-0.22323	-0.00028763	NaN	124.08	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60109			26763	2342	18040	18050							-0.027942425476112476
LFDRRRWSFWW	11	Unmodified	_LFDRRRWSFWW_					0	0	0			REV__ENSG00000132793|ENST00000373257|LPIN3	REV__ENSG00000132793|ENST00000373257|LPIN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.617919921875	3	552.28451	1653.8317	0.16392	9.0531E-05	-1.7044	-0.00094131	-1.5405	-0.00085078	552.6178894976784	18.672	0.53357	18.195	17.983	18.517	-0.47694					29	11	4	0	0	0	0.81219	1	420	420		8.7993	3.3864	1	188610	+		26764	19033	18041	18051	30487	30487					0.03093730385262461
LFEGSGVP	8	Unmodified	_LFEGSGVP_					0	0	0		nc|ENSG00000175600|Q9HAC7-4|SUGCT;nc|ENSG00000175600|Q9HAC7-2|SUGCT;ENSG00000175600|ENST00000335693|SUGCT;nc|ENSG00000175600|Q9HAC7-3|SUGCT	nc|ENSG00000175600|Q9HAC7-4|SUGCT	nc|ENSG00000175600|Q9HAC7-4|SUGCT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.209228515625	2	403.208161	804.401769	2.9266	0.00118	-0.85515	-0.0003448	2.0714	0.00083522	403.2077473802554	85.716	2.0213	85.774	85.282	87.304	0.057899					111	46	4	0	0	0	0.87276	1	8762	8762		29.842	0	1	1450600			26765	7028	18042	18052	30488	30488					-0.008255509479909051
LFEIATKYL	9	Unmodified	_LFEIATKYL_					0	0	0			REV__ENSG00000187775|ENST00000389840|DNAH17;REV__nc|ENSG00000187775|Q9UFH2-4|DNAH17	REV__ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3186645507812	2	549.3157	1096.61685	0.23279	0.00012788	3.2403	0.00178	3.4731	0.0019078	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.7932	1	10624	10624		21.96	1.9631	1	3004300	+		26766	22946;29169	18043	18053	30489	30489					0.07240370796944262
LFELKRRFV	9	Unmodified	_LFELKRRFV_					0	0	0			REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3662719726562	2	604.369133	1206.72371	-0.16822	-0.00010167	-4.2383	-0.0025615	-4.4065	-0.0026632	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.78058	2	10867	10867;11097		30.504	5.0072	1	47715000	+		26767	16637	18044	18054	30490;30491	30490					0.12861965801971564
LFELKRRFV	9	Unmodified	_LFELKRRFV_					0	0	0			REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3661499023438	2	604.369133	1206.72371	-0.48563	-0.0002935	-3.9352	-0.0023783	-4.4209	-0.0026718	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.78058	2	11259	11259;11647		30.504	2.0956	1	63350000	+		26768	16637	18044	18054	30492;30493	30492					0.12861965801971564
LFELKRRFV	9	Unmodified	_LFELKRRFV_					0	0	0			REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3667602539062	2	604.369133	1206.72371	-0.11879	-7.1791E-05	-4.2459	-0.0025661	-4.3646	-0.0026379	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.74721	3	11719	11600;11706;11719		37.159	6.8414	1	64334000	+		26769	16637	18044	18054	30494;30495;30496	30496					0.12861965801971564
LFELKRRFV	9	Unmodified	_LFELKRRFV_					0	0	0			REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3668823242188	2	604.369133	1206.72371	-1.2751	-0.00077064	-2.39	-0.0014444	-3.6651	-0.0022151	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.7932	4	12432	12432;12544;12686;12895		23.042	3.0457	1	3346600	+		26770	16637	18044	18054	30497;30498;30499;30500	30497					0.12861965801971564
LFERELVN	8	Unmodified	_LFERELVN_					0	0	0		ENSG00000197016|ENST00000330619|ZNF470	ENSG00000197016|ENST00000330619|ZNF470	ENSG00000197016|ENST00000330619|ZNF470	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.27496337890625	2	510.279649	1018.54475	1.0947	0.00055858	-2.9078	-0.0014838	-1.8131	-0.00092519	510.27782308963634	56.648	0.34744	57.207	57.054	57.401	0.55954					10	7	2	0	0	0	0.4196	1	5884	5884		21.96	0	1	244520			26771	8123	18045	18055	30501	30501					0.03621456443238458
LFERLVKVN	9	Unmodified	_LFERLVKVN_					0	0	0		ENSG00000124201|ENST00000396105|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.36181640625	2	559.340041	1116.66553	0.29153	0.00016306	-1.7278	-0.0009664	-1.4362	-0.00080334	559.3389740626094	79.985	1.0157	80.401	79.955	80.97	0.41621					39	23	2	0	0	0	0.20789	1	9136	9136		45.972	14.017	1	372190			26772	3316	18046	18056	30502	30502					0.11186284156701731
LFEVRNTY	8	Unmodified	_LFEVRNTY_					0	0	0			REV__ENST00000296885.7_1_6:88117749-88144792:+|nuORF	REV__ENST00000296885.7_1_6:88117749-88144792:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2731323242188	2	521.271824	1040.5291	-0.07231	-3.7693E-05	0.59139	0.00030827	0.51908	0.00027058	521.2725642699986	44.148	0.48986	44.598	44.322	44.812	0.45025					25	11	3	0	0	0	0.73851	1	4037	4037		65.803	7.0212	1	527560	+		26773	23986	18047	18057	30503	30503					0.010451699261921021
LFFGPQFAVW	10	Unmodified	_LFFGPQFAVW_					0	0	0			REV__ENSG00000188937|ENST00000378220|NYX	REV__ENSG00000188937|ENST00000378220|NYX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3145141601562	2	606.316035	1210.61752	0.93848	0.00056901	-3.9643	-0.0024036	-3.0258	-0.0018346	606.3134925628788	82.676	0.77465	82.61	82.236	83.011	-0.066185					27	17	2	0	0	0	0.84112	1	8381	8381		37.159	2.0071	1	187200	+		26774	23046	18048	18058	30504	30504					0.020632102366334948
LFFGPQFAVW	10	Unmodified	_LFFGPQFAVW_					0	0	0			REV__ENSG00000188937|ENST00000378220|NYX	REV__ENSG00000188937|ENST00000378220|NYX	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	606.316035	1210.61752	-0.4648	-0.00028182	-2.6973	-0.0016354	-3.1621	-0.0019172	606.3143453216353	82.55	0.86192	82.616	82.22	83.082	0.06591	0.037819	0.00055377	NaN	37.159	34	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139870	+		26775	23046	18048	18058							0.020632102366334948
LFFGPQFAVW	10	Unmodified	_LFFGPQFAVW_					0	0	0			REV__ENSG00000188937|ENST00000378220|NYX	REV__ENSG00000188937|ENST00000378220|NYX	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	606.316035	1210.61752	0.93848	0.00056901	-3.9643	-0.0024036	-3.0258	-0.0018346	606.3134925628788	82.676	0.77465	82.61	82.236	83.011	-0.066185	0.032041	-0.00098255	NaN	37.159	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	187200	+		26776	23046	18048	18058							0.020632102366334948
LFFGPQFAVW	10	Unmodified	_LFFGPQFAVW_					0	0	0			REV__ENSG00000188937|ENST00000378220|NYX	REV__ENSG00000188937|ENST00000378220|NYX	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	606.316035	1210.61752	-0.48764	-0.00029566	-2.5876	-0.0015689	-3.0753	-0.0018646	606.3143275716584	82.449	0.7324	82.508	82.251	82.984	0.059158	-0.06986	0.00068678	NaN	37.159	28	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	155800	+		26777	23046	18048	18058							0.020632102366334948
LFFISQIRVYR	11	Unmodified	_LFFISQIRVYR_					0	0	0		ENST00000311351.8_1_8:38020868-38020931:-|nuORF	ENST00000311351.8_1_8:38020868-38020931:-|nuORF	ENST00000311351.8_1_8:38020868-38020931:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.2825927734375	3	481.281995	1440.82415	1.7344	0.00083475	0.87861	0.00042286	2.613	0.0012576	481.2822515541805	101.11	1.062	101.43	100.51	101.57	0.32511					61	27	3	0	0	0	0.79224	1	12292	12292		12.957	0	1	622490			26778	9928	18049	18059	30505	30505					0.12137578064994159
LFFITFLLF	9	Unmodified	_LFFITFLLF_					0	0	0			REV__ENSG00000243729|ENST00000641768|OR5V1	REV__ENSG00000243729|ENST00000641768|OR5V1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.84033203125	2	580.841354	1159.66815	0.64192	0.00037286	-2.0106	-0.0011678	-1.3687	-0.00079499	580.8399997377094	69.658	0.88029	69.793	69.47	70.351	0.13506					122	43	4	0	0	0	0.76996	1	6282	6282		33.516	5.6333	1	14396000	+		26779	23843	18050	18060	30506	30506					0.09470739561652408
LFFLFLCS	8	Unmodified	_LFFLFLCS_					0	0	0			REV__ENST00000531709.6_1_11:62566311-62566866:-|nuORF	REV__ENST00000531709.6_1_11:62566311-62566866:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25982666015625	2	495.261882	988.509211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.57	1	35.818	35.318	36.318	0.24769								0	0	0	0.29199	1	2727	2727		29.842	3.1486	1		+		26780	28308	18051	18061	30507	30507					0.01449702661864194
LFFLFLGG	8	Unmodified	_LFFLFLGG_					0	0	0			REV__nc|ENSG00000054392|Q5VTY9-2|HHAT	REV__nc|ENSG00000054392|Q5VTY9-2|HHAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2625732421875	2	457.262739	912.510926	-0.13162	-6.0186E-05	3.6776	0.0016816	3.546	0.0016214	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.88393	1	7659	7659		33.493	0	1	1194000	+		26781	29692	18052	18062	30508	30508					0.051170797421377756
LFGAMVKPT	9	Oxidation (M)	_LFGAM(Oxidation (M))VKPT_		LFGAM(1)VKPT		LFGAM(48)VKPT	0	0	1			REV__ENSG00000172365|ENST00000641342|OR5B2	REV__ENSG00000172365|ENST00000641342|OR5B2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	490.2683410644531	2	490.267696	978.520839	-1.0359	-0.00050789	2.4837	0.0012177	1.4477	0.00070977	490.26894349416415	84.446	2.9711	84.446	83.546	86.517	0					137	69	2	0	0	0	0.58151	1	8106	8106		47.916	14.4	1	202680	+		26782	21825	18053	18063	30509	30509		326			0.030718996852101554
LFGASAGAL	9	Unmodified	_LFGASAGAL_					0	0	0		nc|ENSG00000100344|Q9NST1-2|PNPLA3;ENSG00000100344|ENST00000216180|PNPLA3	nc|ENSG00000100344|Q9NST1-2|PNPLA3	nc|ENSG00000100344|Q9NST1-2|PNPLA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.7235107421875	2	403.723978	805.433404	-1.8572	-0.00074981	2.1457	0.00086627	0.28846	0.00011646	403.7247227583041	64.772	1.8283	64.897	63.712	65.54	0.12545					133	73	3	0	0	0	0.62081	1	5754	5754		45.952	1.8352	1	1035700			26783	1828	18054	18064	30510	30510					0.022904418059511045
LFGDSKKLTAH	11	Unmodified	_LFGDSKKLTAH_					0	0	0		nc|ENSG00000152936|Q8N9Z9-4|LMNTD1;nc|ENSG00000152936|Q8N9Z9|LMNTD1;ENSG00000152936|ENST00000458174|LMNTD1;nc|ENSG00000152936|Q8N9Z9-2|LMNTD1;nc|ENSG00000152936|Q8N9Z9-3|LMNTD1	nc|ENSG00000152936|Q8N9Z9-4|LMNTD1	nc|ENSG00000152936|Q8N9Z9-4|LMNTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	608.8377685546875	2	608.837862	1215.66117	1.1149	0.0006788	-1.4718	-0.00089608	-0.35687	-0.00021728	608.8364638493554	111.26	0.70899	111.37	110.92	111.63	0.11118					51	26	3	0	0	0	0.72106	1	11983	11983		28.081	0.19925	1	85558			26784	5203	18055	18065	30511	30511					0.061967749431460106
LFGDSKKLTAH	11	Unmodified	_LFGDSKKLTAH_					0	0	0		nc|ENSG00000152936|Q8N9Z9-4|LMNTD1;nc|ENSG00000152936|Q8N9Z9|LMNTD1;ENSG00000152936|ENST00000458174|LMNTD1;nc|ENSG00000152936|Q8N9Z9-2|LMNTD1;nc|ENSG00000152936|Q8N9Z9-3|LMNTD1	nc|ENSG00000152936|Q8N9Z9-4|LMNTD1	nc|ENSG00000152936|Q8N9Z9-4|LMNTD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	608.837862	1215.66117	-0.43562	-0.00026522	-0.67571	-0.0004114	-1.1113	-0.00067662	608.8374243425224	111.56	0.46792	111.5	111.3	111.77	-0.059937	0.22173	0.0018202	NaN	28.081	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24706			26785	5203	18055	18065							0.061967749431460106
LFGDSKKLTAH	11	Unmodified	_LFGDSKKLTAH_					0	0	0		nc|ENSG00000152936|Q8N9Z9-4|LMNTD1;nc|ENSG00000152936|Q8N9Z9|LMNTD1;ENSG00000152936|ENST00000458174|LMNTD1;nc|ENSG00000152936|Q8N9Z9-2|LMNTD1;nc|ENSG00000152936|Q8N9Z9-3|LMNTD1	nc|ENSG00000152936|Q8N9Z9-4|LMNTD1	nc|ENSG00000152936|Q8N9Z9-4|LMNTD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	608.837862	1215.66117	0.90871	0.00055326	-1.2039	-0.000733	-0.29522	-0.00017974	608.8370578987233	111.2	0.65929	111.27	110.99	111.65	0.069542	-0.0055091	0.001177	NaN	28.081	40	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49826			26786	5203	18055	18065							0.061967749431460106
LFGFTLVSGT	10	Unmodified	_LFGFTLVSGT_					0	0	0		nc|ENSG00000101443|Q14508-4|WFDC2;nc|ENSG00000101443|Q14508-5|WFDC2;ENSG00000101443|ENST00000372676|WFDC2	nc|ENSG00000101443|Q14508-4|WFDC2	nc|ENSG00000101443|Q14508-4|WFDC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.2786865234375	2	521.2844	1040.55425	0.56276	0.00029336	-0.79558	-0.00041472	-0.23282	-0.00012136	521.2839073476574	56.656	0.60297	57.216	56.92	57.523	0.55954					31	13	3	0	0	0	0.50394	1	5890	5890		55.504	4.1688	1	508760			26787	1942	18056	18066	30512	30512					0.0355922472876955
LFGGTGALA	9	Unmodified	_LFGGTGALA_					0	0	0			REV__ENSG00000105429|ENST00000251268|MEGF8	REV__ENSG00000105429|ENST00000251268|MEGF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.7237854003906	2	403.723978	805.433404	-1.8572	-0.00074981	2.1457	0.00086627	0.28846	0.00011646	403.7247227583041	64.772	1.8283	64.897	63.712	65.54	0.12545					133	73	3	0	0	0	0.67235	1	5678	5678		42.474	0.078325	1	1035700	+		26788	17539	18057	18067	30513	30513					0.022904418059397358
LFGKLEFTQIS	11	Unmodified	_LFGKLEFTQIS_					0	0	0			REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF	REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.859375	2	641.855721	1281.69689	1.7061	0.001095	4.3829	0.0028132	6.089	0.0039082	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.70737	1	13044	13044		30.318	1.1477	1	27133000	+		26789	22968	18058	18068	30514	30514					0.0673081240013289
LFGKLEFTQIS	11	Unmodified	_LFGKLEFTQIS_					0	0	0			REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF	REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3655395507812	2	641.855721	1281.69689	7.1265	0.0045742	-1.103	-0.00070794	6.0235	0.0038662	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.66929	1	13751	13751		36.447	5.9431	1	98705	+		26790	22968	18058	18068	30515	30515					0.0673081240013289
LFGKLEFTQIS	11	Unmodified	_LFGKLEFTQIS_					0	0	0			REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF	REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8543090820312	2	641.855721	1281.69689	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.82	1	114.8	114.3	115.3	-0.016441								0	0	0	0.56276	1	13845	13845		21.686	0	1		+		26791	22968	18058	18068	30516	30516					0.0673081240013289
LFGLRMLG	8	Unmodified	_LFGLRMLG_					0	0	0			REV__nc|ENSG00000137474|Q13402-5|MYO7A	REV__nc|ENSG00000137474|Q13402-5|MYO7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.7660827636719	2	453.765123	905.515694	0.25664	0.00011645	1.276	0.00057901	1.5326	0.00069546	453.7655790571442	42.641	1.9691	42.612	42.161	44.13	-0.029461					74	47	2	0	0	0	0.89457	1	3172	3172		37.028	0	1	288700	+		26792	19385	18059	18069	30517	30517					0.059156406132501616
LFGRFTIKSDV	11	Unmodified	_LFGRFTIKSDV_					0	0	0		ENSG00000000938|ENST00000374005|FGR	ENSG00000000938|ENST00000374005|FGR	ENSG00000000938|ENST00000374005|FGR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.36279296875	2	641.861338	1281.70812	1.706	0.001095	-4.3678	-0.0028035	-2.6617	-0.0017085	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.61369	3	12358	12358;12752;12944		42.864	5.0528	1	27133000			26793	646	18060	18070	30518;30519;30520	30518					0.0785363449426768
LFGTGPPTVY	10	Unmodified	_LFGTGPPTVY_					0	0	0			REV__ENST00000556439.1_1_14:20920437-20922842:-|nuORF	REV__ENST00000556439.1_1_14:20920437-20922842:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2716674804688	2	526.276575	1050.5386	0.42062	0.00022136	-4.3064	-0.0022664	-3.8858	-0.002045	526.2742119410344	55.335	0.74729	55.903	55.616	56.363	0.56836					42	17	3	0	0	0	0.37951	1	5713	5713		65.803	7.0212	1	1627500	+		26794	17027	18061	18071	30521	30521					0.015349382117165078
LFGTVILKY	9	Unmodified	_LFGTVILKY_					0	0	0		ENST00000493989.1_1_7:34994291-34994973:-|nuORF;nc|ENSG00000173852|Q2PZI1|DPY19L1;ENSG00000173852|ENST00000638088|DPY19L1	ENST00000493989.1_1_7:34994291-34994973:-|nuORF	ENST00000493989.1_1_7:34994291-34994973:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.3037719726562	2	527.320786	1052.62702	0.48511	0.00025581	2.0601	0.0010863	2.5452	0.0013421	527.3230754834212	57.98	0.20877	58.533	58.47	58.679	0.55323					7	4	2	0	0	0	0.20789	1	6084	6084		24.203	0	1	160240			26795	6892	18062	18072	30522	30522					0.10280978522177975
LFHELQLLN	9	Unmodified	_LFHELQLLN_					0	0	0		nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-5|PCM1;ENSG00000078674|ENST00000325083|PCM1	nc|ENSG00000078674|Q15154-4|PCM1	nc|ENSG00000078674|Q15154-4|PCM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	563.8170776367188	2	563.816399	1125.61824	-0.18453	-0.00010404	1.3166	0.00074234	1.1321	0.0006383	563.8170656553208	53.579	0.9713	53.517	53.086	54.057	-0.062061					40	24	2	0	0	0	0.78058	1	4392	4392		30.504	2.6214	1	183800			26796	1404	18063	18073	30523	30523					0.06046004885729417
LFHFASAY	8	Unmodified	_LFHFASAY_					0	0	0			REV__ENSG00000140463|ENST00000268057|BBS4	REV__ENSG00000140463|ENST00000268057|BBS4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.2336730957031	2	478.237253	954.459953	-1.6933	-0.00080982	-3.9391	-0.0018838	-5.6325	-0.0026937	478.23521025919547	44.024	0.58456	44.024	43.744	44.329	0					32	13	3	0	0	0	0.92774	1	3147	3147		49.211	3.2588	1	186720	+		26797	19619	18064	18074	30524	30524					-0.019098693027331137
LFHFDSPK	8	Unmodified	_LFHFDSPK_					0	0	0			REV__ENST00000367855.7_1_6:134492115-134495951:-|nuORF	REV__ENST00000367855.7_1_6:134492115-134495951:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.75347900390625	2	495.75581	989.497067	-0.93026	-0.00046118	-2.748	-0.0013623	-3.6783	-0.0018235	495.75408621645647	27.435	0.70149	27.259	27.016	27.717	-0.17559					24	15	3	0	0	0	0.38363	1	1592	1592		90.777	5.8611	1	501870	+		26798	18319	18065	18075	30525	30525					0.0018980224303959403
LFHFDSPK	8	Unmodified	_LFHFDSPK_					0	0	0			REV__ENST00000367855.7_1_6:134492115-134495951:-|nuORF	REV__ENST00000367855.7_1_6:134492115-134495951:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	495.75581	989.497067	1.1342	0.0005623	-9.5488	-0.0047339	-8.4146	-0.0041716	495.75303545632914	27.534	0.90796	27.28	26.989	27.897	-0.25465	0.010268	-0.0054619	NaN	90.777	56	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	451180	+		26799	18319	18065	18075							0.0018980224303959403
LFHFLGSRRQ	10	Unmodified	_LFHFLGSRRQ_					0	0	0		ENST00000502481.5_2_5:102456325-102456463:+|nuORF	ENST00000502481.5_2_5:102456325-102456463:+|nuORF	ENST00000502481.5_2_5:102456325-102456463:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	630.8502807617188	2	630.851638	1259.68872	-0.029329	-1.8502E-05	-2.8973	-0.0018278	-2.9266	-0.0018463	630.849677894081	111.25	1.2557	111.25	110.42	111.68	0					88	39	3	0	0	0	0.8651	1	11557	11557		25.574	2.0514	1	207570			26800	12852	18066	18076	30526	30526					0.06926722994035117
LFHLPVHLKLH	11	Unmodified	_LFHLPVHLKLH_					0	0	0			REV__chr19:37551665-37569850|44|10.86|0.58|4.22|+|1|TE_info:L2b,L2b_dup89032,L2,LINE,acceptor,+,37569850,37569909|ZNF540,None|1	REV__chr19:37551665-37569850|44|10.86|0.58|4.22|+|1|TE_info:L2b,L2b_dup89032,L2,LINE,acceptor,+,37569850,37569909|ZNF540,None|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.27825927734375	3	451.943313	1352.80811	-1.6541	-0.00074756	1.7865	0.00080741	0.13242	5.9847E-05	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.78683	1	4627	4627		14.086	0	1	430100	+		26801	15699	18067	18077	30527	30527					0.14581916618749347
LFHLSIRP	8	Unmodified	_LFHLSIRP_					0	0	0			REV__ENST00000586659.5_1_19:11275055-11275190:-|nuORF	REV__ENST00000586659.5_1_19:11275055-11275190:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79583740234375	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.85277	1	4089	4089		25.45	0	1	412030	+		26802	29111	18068	18078	30528	30528					0.08446074267988024
LFHSLLPR	8	Unmodified	_LFHSLLPR_					0	0	0			REV__ENST00000264934.5_1_5:32230418-32242200:-|nuORF	REV__ENST00000264934.5_1_5:32230418-32242200:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7955627441406	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.86288	1	3859	3859		26.796	0	1	1240000	+		26803	24482	18069	18079	30529	30529					0.08446074267988024
LFHTLLRP	8	Unmodified	_LFHTLLRP_					0	0	0			REV__ENST00000357066.7_1_19:2072329-2072617:-|nuORF	REV__ENST00000357066.7_1_19:2072329-2072617:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.80352783203125	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.90465	1	4531	4531		40.573	0	1	2702800	+		26804	25405	18070	18080	30530	30530					0.09366360785043071
LFIGKQGDK	9	Unmodified	_LFIGKQGDK_					0	0	0			REV__nc|ENSG00000055917|Q8TB72-2|PUM2	REV__nc|ENSG00000055917|Q8TB72-2|PUM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	503.7923889160156	2	503.290017	1004.56548	-0.060584	-3.0491E-05	3.163	0.0015919	3.1025	0.0015614	503.29162474587787	109.78	0.70062	109.73	109.4	110.1	-0.055084					61	35	2	0	0	0	0.77244	1	11953	11953		32.812	2.3088	1	1014200	+		26805	16414	18071	18081	30531	30531					0.06338046822895649
LFIGRKKA	8	Unmodified	_LFIGRKKA_					0	0	0		ENST00000466595.5_1_8:61488829-61533325:+|nuORF	ENST00000466595.5_1_8:61488829-61533325:+|nuORF	ENST00000466595.5_1_8:61488829-61533325:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.8089599609375	2	466.805637	931.596721	0.1415	6.6052E-05	1.3301	0.00062092	1.4716	0.00068697	466.80624259533187	31.014	0.95931	31.126	30.773	31.732	0.11198					64	47	2	0	0	0	0.81548	1	1408	1408		20.482	5.8177	1	101980			26806	12138	18072	18082	30532	30532					0.12818664647647893
LFIGSACD	8	Unmodified	_LFIGSACD_					0	0	0			REV__ENST00000565642.5_1_16:71777395-71799448:-|nuORF	REV__ENST00000565642.5_1_16:71777395-71799448:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.1942138671875	2	413.194196	824.37384	0.83061	0.0003432	-2.9498	-0.0012188	-2.1192	-0.00087562	413.1932909391075	85.831	2.7525	85.757	84.67	87.423	-0.073761					147	63	4	0	0	0	0.85277	1	8812	8812		25.45	1.2474	1	1300900	+		26807	21314	18073	18083	30533	30533					-0.045371971997496985
LFIKVKDEN	9	Unmodified	_LFIKVKDEN_					0	0	0		nc|ENSG00000102290|Q9BZA7-7|PCDH11X;ENSG00000099715|ENST00000698851|PCDH11Y;nc|ENSG00000099715|Q9BZA8|PCDH11Y;nc|ENSG00000102290|Q9BZA7-8|PCDH11X;chrX:92387933-92618264|17|10.29|0.21|5.6|+|ENST00000406881|PCDH11X,PCDH11X;nc|ENSG00000102290|Q9BZA7-3|PCDH11X;nc|ENSG00000102290|Q9BZA7-4|PCDH11X;nc|ENSG00000102290|Q9BZA7-5|PCDH11X;nc|ENSG00000102290|Q9BZA7-6|PCDH11X;nc|ENSG00000102290|Q9BZA7-2|PCDH11X;chrX:91836044-91876781|14|26.86|0.31|6.45|+|ENST00000504220|PCDH11X,PCDH11X;chrX:91879273-92201375|15|14.67|0.42|5.12|+|ENST00000504220|PCDH11X,PCDH11X;nc|ENSG00000099715|Q9BZA8-4|PCDH11Y;nc|ENSG00000099715|Q9BZA8-2|PCDH11Y;nc|ENSG00000099715|Q9BZA8-3|PCDH11Y;ENST00000361724.3_1_X:91090458-91134302:+|nuORF;ENSG00000102290|ENST00000682573|PCDH11X	nc|ENSG00000102290|Q9BZA7-7|PCDH11X	nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.311767578125	2	553.316232	1104.61791	-0.13159	-7.2811E-05	0.61579	0.00034073	0.4842	0.00026792	553.3165485603674	74.96	1.0987	75.525	75.249	76.347	0.56458					56	26	3	0	0	0	0.084975	1	8535	8535		96.19	0	1	984510			26808	555	18074	18084	30534	30534					0.06978585165848017
LFISGQAA	8	Unmodified	_LFISGQAA_					0	0	0			REV__ENST00000560168.1_1_19:46269581-46272089:-|nuORF	REV__ENST00000560168.1_1_19:46269581-46272089:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.7239990234375	2	403.723978	805.433404	-1.1089	-0.00044771	1.5518	0.00062651	0.44287	0.0001788	403.7244510631445	64.933	1.6766	64.971	63.905	65.582	0.037849					135	64	4	0	0	0	0.88944	2	5746	5728;5746		57.811	5.4358	1	1390300	+		26809	22173	18075	18085	30535;30536	30536					0.022904418059511045
LFISIILR	8	Unmodified	_LFISIILR_					0	0	0			REV__ENST00000536971.1_1_12:7090970-7125761:-|nuORF	REV__ENST00000536971.1_1_12:7090970-7125761:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.30255126953125	2	487.823495	973.632438	-0.8256	-0.00040275	3.8436	0.001875	3.018	0.0014722	487.8254264891694	16.263	0.23456	16.311	16.203	16.438	0.047804					18	10	2	0	0	0	0.4196	1	126	126		18.324	12.012	1	84417	+		26810	17888	18076	18086	30537	30537					0.14456702104655506
LFISIILR	8	Unmodified	_LFISIILR_					0	0	0			REV__ENST00000536971.1_1_12:7090970-7125761:-|nuORF	REV__ENST00000536971.1_1_12:7090970-7125761:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	487.823495	973.632438	0.069528	3.3918E-05	2.7947	0.0013633	2.8643	0.0013973	487.8250260194337	16.277	0.44694	16.336	16.084	16.531	0.059267	0.012782	-0.00065754	NaN	18.324	26	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156820	+		26811	17888	18076	18086							0.14456702104655506
LFKIIKKW	8	Unmodified	_LFKIIKKW_					0	0	0			REV__ENSG00000112249|ENST00000369162|ASCC3	REV__ENSG00000112249|ENST00000369162|ASCC3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3268432617188	2	538.354963	1074.69537	-0.54046	-0.00029096	2.1644	0.0011652	1.6239	0.00087424	538.3557572824749	101.32	0.56739	101.32	101.2	101.77	0					24	13	3	0	0	0	0.4196	1	10317	10317		13.775	4.953	1	166410	+		26812	17934	18077	18087	30538	30538					0.16101267892690885
LFKKDASKLYL	11	Unmodified	_LFKKDASKLYL_					0	0	0		ENST00000493306.1_1_9:110251313-110251631:-|nuORF	ENST00000493306.1_1_9:110251313-110251631:-|nuORF	ENST00000493306.1_1_9:110251313-110251631:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.6009521484375	3	442.599101	1324.77547	1.7929	0.00079355	2.4933	0.0011035	4.2862	0.0018971	442.6001215105029	103.71	1.4704	103.75	103.32	104.79	0.041481					92	35	4	0	0	0	0.74022	1	11278	11278		24.232	4.2013	1	665090			26813	12724	18078	18088	30539	30539					0.12607664705228672
LFKKLPRLY	9	Unmodified	_LFKKLPRLY_					0	0	0			REV__ENSG00000141371|ENST00000269127|CHCT1	REV__ENSG00000141371|ENST00000269127|CHCT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	588.78125	2	589.376426	1176.7383	-1.0796	-0.00063628	1.3427	0.00079135	0.2631	0.00015507	589.3772085888323	44.581	0.64149	45.044	44.704	45.345	0.46313					42	15	4	0	0	0	0.20789	1	4090	4090		18.324	10.634	1	535470	+		26814	19677	18079	18089	30540	30540					0.15700037950114165
LFKKLPRLY	9	Unmodified	_LFKKLPRLY_					0	0	0			REV__ENSG00000141371|ENST00000269127|CHCT1	REV__ENSG00000141371|ENST00000269127|CHCT1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	589.376426	1176.7383	0.72176	0.00042539	0.22665	0.00013358	0.94842	0.00055897	589.3764026919146	44.985	0.67929	44.997	44.636	45.315	0.012058	-0.02401	-0.00083674	NaN	25.45	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67404	+		26815	19677	18079	18089							0.15700037950114165
LFKKLPRLY	9	Unmodified	_LFKKLPRLY_					0	0	0			REV__ENSG00000141371|ENST00000269127|CHCT1	REV__ENSG00000141371|ENST00000269127|CHCT1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	589.376426	1176.7383	0.38668	0.0002279	0.072793	4.2903E-05	0.45947	0.0002708	589.3763696565164	44.91	0.54612	44.958	44.74	45.286	0.048996	-0.062166	-0.0010181	NaN	25.45	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109060	+		26816	19677	18079	18089							0.15700037950114165
LFKKLPRLY	9	Unmodified	_LFKKLPRLY_					0	0	0			REV__ENSG00000141371|ENST00000269127|CHCT1	REV__ENSG00000141371|ENST00000269127|CHCT1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	589.376426	1176.7383	0.20334	0.00011985	0.79222	0.00046692	0.99557	0.00058676	589.3766348480308	45.033	0.72134	44.964	44.596	45.317	-0.068634	-0.056603	-0.00017007	NaN	25.45	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92743	+		26817	19677	18079	18089							0.15700037950114165
LFKLKRKLNRY	11	Unmodified	_LFKLKRKLNRY_					0	0	0			REV__ENST00000568043.5_1_16:30007580-30007859:+|nuORF;REV__ENSG00000169592|ENST00000563197|INO80E	REV__ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.9832763671875	3	493.648789	1477.92454	-2.0219	-0.0009981	3.5054	0.0017304	1.4835	0.00073234	493.6504107120104	44.606	1.8952	44.602	43.855	45.75	-0.0041618					105	44	3	0	0	0	0.84494	1	3490	3490		6.3209	2.7018	1	507660	+		26818	21588;28891	18080	18090	30541	30541					0.20469235118639517
LFKLKRKLNRY	11	Unmodified	_LFKLKRKLNRY_					0	0	0			REV__ENST00000568043.5_1_16:30007580-30007859:+|nuORF;REV__ENSG00000169592|ENST00000563197|INO80E	REV__ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.64898681640625	3	493.648789	1477.92454	0.3003	0.00014824	2.0847	0.0010291	2.385	0.0011774	493.9841677291236	45.426	1.1794	45.469	45.194	46.373	0.042599					76	31	3	0	0	0	0.88596	1	3363	3363		3.6191	0	1	182700	+		26819	21588;28891	18080	18090	30542	30542					0.20469235118639517
LFKLKRKLNRY	11	Unmodified	_LFKLKRKLNRY_					0	0	0			REV__ENST00000568043.5_1_16:30007580-30007859:+|nuORF;REV__ENSG00000169592|ENST00000563197|INO80E	REV__ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.64764404296875	3	493.648789	1477.92454	-0.13988	-6.9052E-05	2.2262	0.001099	2.0864	0.0010299	493.64993788378774	45.757	1.7209	45.688	45.192	46.913	-0.068634					91	46	3	0	0	0	0.80593	1	3325	3325		10.104	0	1	212310	+		26820	21588;28891	18080	18090	30543	30543					0.20469235118639517
LFKQIELLT	9	Unmodified	_LFKQIELLT_					0	0	0			REV__ENSG00000121940|ENST00000369969|CLCC1	REV__ENSG00000121940|ENST00000369969|CLCC1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.8331909179688	2	552.8368	1103.65905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.934	1	84.001	83.501	84.501	0.066719								0	0	0	0.36353	1	8359	8359		49.442	10.189	1		+		26821	18473	18081	18091	30544	30544					0.11136346205330483
LFLEKISPFFL	11	Unmodified	_LFLEKISPFFL_					0	0	0		ENST00000302517.7_1_5:139063018-139063435:+|nuORF	ENST00000302517.7_1_5:139063018-139063435:+|nuORF	ENST00000302517.7_1_5:139063018-139063435:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9326477050781	3	451.93208	1352.77441	-0.99129	-0.000448	2.3192	0.0010481	1.3279	0.00060011	451.9330862164875	100.92	2.2384	100.92	100.04	102.28	0					149	53	4	0	0	0	0.77205	1	10332	10332		17.167	2.4731	1	534780			26822	9821	18082	18092	30545	30545					0.11213450336299502
LFLEKISPFFL	11	Unmodified	_LFLEKISPFFL_					0	0	0		ENST00000302517.7_1_5:139063018-139063435:+|nuORF	ENST00000302517.7_1_5:139063018-139063435:+|nuORF	ENST00000302517.7_1_5:139063018-139063435:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9327087402344	3	451.93208	1352.77441	0.75363	0.00034059	0.57344	0.00025916	1.3271	0.00059975	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.71803	2	10564	10564;10588		28.577	6.7963	1	952120			26823	9821	18082	18092	30546;30547	30546					0.11213450336299502
LFLELFRRYTK	11	Unmodified	_LFLELFRRYTK_					0	0	0			REV__ENSG00000175175|ENST00000308249|PPM1E	REV__ENSG00000175175|ENST00000308249|PPM1E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	495.95849609375	3	495.9574	1484.85037	2.8497	0.0014133	-0.27944	-0.00013859	2.5703	0.0012748	495.95718609961506	102.66	1.5398	102.61	101.62	103.16	-0.046997					94	36	4	0	0	0	0.79224	1	11197	11197		12.957	0.52465	1	382330	+		26824	22045	18083	18093	30548	30548					0.12733847236449947
LFLFLGLK	8	Unmodified	_LFLFLGLK_					0	0	0		nc|ENSG00000133704|O15397-2|IPO8;ENSG00000133704|ENST00000256079|IPO8	nc|ENSG00000133704|O15397-2|IPO8	nc|ENSG00000133704|O15397-2|IPO8	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	475.86767578125	2	475.807314	949.600075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.2	1	118.2	117.7	118.7	0								0	0	0	0.30784	1	12048	12048		14.664	0	1				26825	3889	18084	18094	30549	30549					0.12325914701659713
LFLGSILCCV	10	Unmodified	_LFLGSILCCV_					0	0	0		chr2:68294026-68313302|19|13.74|0.83|4.05|-|2|TE_info:L1ME1,L1ME1_dup3432,L1,LINE,donor,+,68313302,68313802|CNRIP1,None|10	chr2:68294026-68313302|19|13.74|0.83|4.05|-|2|TE_info:L1ME1,L1ME1_dup3432,L1,LINE,donor,+,68313302,68313802|CNRIP1,None|10	chr2:68294026-68313302|19|13.74|0.83|4.05|-|2|TE_info:L1ME1,L1ME1_dup3432,L1,LINE,donor,+,68313302,68313802|CNRIP1,None|10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.285888671875	2	534.285031	1066.55551	2.1684	0.0011585	-3.7022	-0.001978	-1.5338	-0.00081949	534.2829757234389	108.88	0.50554	108.95	108.7	109.21	0.068039					43	26	2	0	0	0	0.777	1	13223	13223		40.573	4.9543	1	640710			26826	347	18085	18095	30550	30550					0.024893995016327608
LFLKPGIPYPI	11	Unmodified	_LFLKPGIPYPI_					0	0	0		ENSG00000106804|ENST00000223642|C5	ENSG00000106804|ENST00000223642|C5	ENSG00000106804|ENST00000223642|C5	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	629.3818969726562	2	629.383917	1256.75328	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.92	1	112.86	112.36	113.36	-0.067215								0	0	0	0.56276	1	12259	12259		14.865	2.0532	1				26827	2319	18086	18096	30551	30551					0.1351748502747796
LFLKTLLAF	9	Unmodified	_LFLKTLLAF_					0	0	0		ENST00000586271.1_1_17:76120592-76121921:-|nuORF;nc|ENSG00000141524|Q7Z403-2|TMC6;ENST00000588087.5_1_17:76116732-76122925:-|nuORF;ENSG00000141524|ENST00000590602|TMC6;nc|ENSG00000141524|Q7Z403-4|TMC6	ENST00000586271.1_1_17:76120592-76121921:-|nuORF	ENST00000586271.1_1_17:76120592-76121921:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.3400268554688	2	533.338978	1064.6634	1.2441	0.00066355	1.0363	0.00055269	2.2804	0.0012162	533.3394000177375	99.114	2.7086	99.162	98.677	101.39	0.047531					171	63	4	0	0	0	0.7932	1	10631	10631		21.96	5.4867	1	3009900			26828	4509	18087	18097	30552	30552					0.133658554188969
LFLLCLVG	8	Unmodified	_LFLLCLVG_					0	0	0		nc|ENSG00000125875|Q96BZ9-2|TBC1D20	nc|ENSG00000125875|Q96BZ9-2|TBC1D20	nc|ENSG00000125875|Q96BZ9-2|TBC1D20	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.2518005371094	2	439.264425	876.514297	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.197	1	15.114	14.614	15.614	-0.083363								0	0	0	0.2945	1	17	17		33.493	0	1				26829	14895	18088	18098	30553	30553					0.07110006524499113
LFLLERTATG	10	Unmodified	_LFLLERTATG_					0	0	0			REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF	REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.8198852539062	2	560.821681	1119.62881	0.38825	0.00021774	-3.7813	-0.0021206	-3.393	-0.0019029	560.8194818178797	92.394	2.729	92.618	91.343	94.072	0.22352					209	64	4	0	0	0	0.86763	1	9332	9332		26.693	2.4902	1	816880	+		26830	19930	18089	18099	30554	30554					0.07377987540144204
LFLLLTPALQH	11	Unmodified	_LFLLLTPALQH_					0	0	0		ENST00000536896.2_1_1:26145517-26146111:-|nuORF	ENST00000536896.2_1_1:26145517-26146111:-|nuORF	ENST00000536896.2_1_1:26145517-26146111:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.8878784179688	2	633.384448	1264.75434	-0.12792	-8.1025E-05	1.9366	0.0012266	1.8087	0.0011456	633.3855992497944	56.952	1.0049	56.939	56.691	57.696	-0.012203					73	35	3	0	0	0	0.76892	1	5164	5164		19.997	5.8596	1	170190			26831	13443	18090	18100	30555	30555					0.13255699396358978
LFLLPLTAM	9	Unmodified	_LFLLPLTAM_					0	0	0		nc|ENSG00000293505|Q96P88|GNRHR2	nc|ENSG00000293505|Q96P88|GNRHR2	nc|ENSG00000293505|Q96P88|GNRHR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8038635253906	2	509.803914	1017.59328	1.253	0.0006388	-1.6334	-0.0008327	-0.38035	-0.0001939	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.77546	1	9106	9106		31.955	0	1	3243500			26832	15356	18091	18101	30556	30556					0.08518233758763927
LFLLRILYQS	10	Unmodified	_LFLLRILYQS_					0	0	0		ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2279357910156	3	422.592058	1264.75434	-0.32328	-0.00013662	1.8454	0.00077984	1.5221	0.00064322	422.5927565811279	64.596	0.86206	64.562	64.206	65.068	-0.034256					33	23	2	0	0	0	0.37624	1	6126	6126		11.097	0	1	69929			26833	3392	18092	18102	30557	30557					0.13255699396381715
LFLLYMVI	8	Oxidation (M)	_LFLLYM(Oxidation (M))VI_		LFLLYM(1)VI		LFLLYM(44)VI	0	0	1		ENST00000297625.7_1_9:34370365-34370665:-|nuORF	ENST00000297625.7_1_9:34370365-34370665:-|nuORF	ENST00000297625.7_1_9:34370365-34370665:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.2984008789062	2	514.298465	1026.58238	-1.5684	-0.00080663	0.56372	0.00028992	-1.0047	-0.00051671	514.2990007980452	96.402	2.2846	96.604	95.027	97.312	0.20242					111	53	3	0	0	0	0.91333	1	9855	9855		43.626	6.4669	1	524360			26834	9763	18093	18103	30558	30558		165			0.0701483138450385
LFLMLVTGVM	10	2 Oxidation (M)	_LFLM(Oxidation (M))LVTGVM(Oxidation (M))_		LFLM(1)LVTGVM(1)		LFLM(41)LVTGVM(41)	0	0	2			REV__ENSG00000172967|ENST00000684488|XKR3	REV__ENSG00000172967|ENST00000684488|XKR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3102416992188	2	578.311246	1154.60794	-0.93812	-0.00054253	-0.25661	-0.0001484	-1.1947	-0.00069093	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.777	1	12069	12069		40.573	6.4001	1	3649700	+		26835	21872	18094	18104	30559	30559		328;329			0.03681937844635286
LFLMSMQIK	9	Unmodified	_LFLMSMQIK_					0	0	0			REV__ENST00000607778.1_1_6:158613397-158613463:+|nuORF	REV__ENST00000607778.1_1_6:158613397-158613463:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.8065185546875	2	555.806131	1109.59771	0.47465	0.00026381	0.10639	5.9133E-05	0.58104	0.00032295	555.805966750139	57.199	0.95191	57.754	57.397	58.349	0.55512					50	23	3	0	0	0	0.51307	1	5956	5956		51.335	1.3109	1	794490	+		26836	29390	18095	18105	30560	30560					0.04729374910016304
LFLMSMQIK	9	Unmodified	_LFLMSMQIK_					0	0	0			REV__ENST00000607778.1_1_6:158613397-158613463:+|nuORF	REV__ENST00000607778.1_1_6:158613397-158613463:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	555.806131	1109.59771	-0.96504	-0.00053637	1.7318	0.00096256	0.7668	0.00042619	555.8068130888066	57.339	0.94637	57.733	57.411	58.358	0.39408	-0.010317	0.0010095	NaN	51.335	51	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	661380	+		26837	29390	18095	18105							0.04729374910016304
LFLMSMQIK	9	Unmodified	_LFLMSMQIK_					0	0	0			REV__ENST00000607778.1_1_6:158613397-158613463:+|nuORF	REV__ENST00000607778.1_1_6:158613397-158613463:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	555.806131	1109.59771	0.47465	0.00026381	0.10639	5.9133E-05	0.58104	0.00032295	555.805966750139	57.199	0.95191	57.754	57.397	58.349	0.55512	0.010317	-0.00079737	NaN	51.335	50	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	794490	+		26838	29390	18095	18105							0.04729374910016304
LFLQKSKKHL	10	Unmodified	_LFLQKSKKHL_					0	0	0		ENST00000572919.1_3_17:3488830-3495572:-|nuORF;ENSG00000196689|ENST00000572705|TRPV1	ENST00000572919.1_3_17:3488830-3495572:-|nuORF	ENST00000572919.1_3_17:3488830-3495572:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3927001953125	2	621.390065	1240.76558	0.9213	0.00057249	3.1806	0.0019764	4.1019	0.0025489	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.6116	1	11129	11129		49.442	1.7842	1	22352000			26839	8093	18096	18106	30561	30561					0.1548252149052587
LFLRKSPP	8	Unmodified	_LFLRKSPP_					0	0	0			REV__ENST00000360547.9_1_15:81601214-81601322:+|nuORF	REV__ENST00000360547.9_1_15:81601214-81601322:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2977294921875	2	479.297645	956.580737	-0.46769	-0.00022416	0.69766	0.00033439	0.22997	0.00011022	479.2977943251352	57.596	1.6193	57.99	57.574	59.193	0.39407					92	39	4	0	0	0	0.92457	1	6034	6034		47.916	5.4411	1	5272200	+		26840	25481	18097	18107	30562	30562					0.10070958410756248
LFLRLPHPG	9	Unmodified	_LFLRLPHPG_					0	0	0			REV__nc|ENSG00000183317|Q5JZY3-2|EPHA10	REV__nc|ENSG00000183317|Q5JZY3-2|EPHA10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.241943359375	2	525.316369	1048.61818	0.0063484	3.3349E-06	-1.1442	-0.00060105	-1.1378	-0.00059771	525.315504967252	74.249	0.41199	74.64	74.376	74.787	0.39111					15	9	2	0	0	0	0.20789	1	8376	8376		26.796	11.931	1	125210	+		26841	22596	18098	18108	30563	30563					0.09582049676373572
LFLSLQLVAF	10	Unmodified	_LFLSLQLVAF_					0	0	0		ENSG00000172772|ENST00000395079|OR10W1	ENSG00000172772|ENST00000395079|OR10W1	ENSG00000172772|ENST00000395079|OR10W1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.348388671875	2	575.847167	1149.67978	2.5497	0.0014682	2.4453	0.0014081	4.995	0.0028764	575.8483282068971	102.55	0.2962	102.85	102.68	102.98	0.29864					15	6	3	0	0	0	0.8608	1	12513	12513		34.173	1.3601	1	378470			26842	6793	18099	18109	30564	30564					0.11092936584987001
LFLSPNSVF	9	Unmodified	_LFLSPNSVF_					0	0	0			REV__ENST00000462875.1_1_6:31609234-31609708:-|nuORF	REV__ENST00000462875.1_1_6:31609234-31609708:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2821655273438	2	512.279118	1022.54368	-0.052063	-2.6671E-05	4.432	0.0022704	4.3799	0.0022437	512.2812910993212	86.454	3.487	86.521	85.51	88.997	0.067436					149	81	2	0	0	0	0.76764	1	8653	8653		34.173	3.6689	1	329990	+		26843	27066	18100	18110	30565	30565					0.03331242074330021
LFLTAVPP	8	Unmodified	_LFLTAVPP_					0	0	0		ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.260986328125	2	429.260197	856.50584	-1.8456	-0.00079222	2.6683	0.0011454	0.82275	0.00035317	429.26124468672595	112.03	0.80681	112.01	111.83	112.63	-0.019882					47	25	2	0	0	0	0.83466	1	11930	11930		23.037	1.3344	1	1442400			26844	6581	18101	18111	30566	30566					0.07184775879522931
LFLTAVPP	8	Unmodified	_LFLTAVPP_					0	0	0		ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	429.260197	856.50584	2.718	0.0011667	-1.9775	-0.00084887	0.74045	0.00031785	429.25926156777746	112.18	0.62576	112.15	112.07	112.69	-0.025414	0.244	-0.0015992	NaN	23.037	34	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2047700			26845	6581	18101	18111							0.07184775879522931
LFLTAVPP	8	Unmodified	_LFLTAVPP_					0	0	0		ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	429.260197	856.50584	-1.6313	-0.00070026	1.4908	0.00063993	-0.14055	-6.0333E-05	429.26067762622506	111.79	0.22131	111.9	111.72	111.94	0.11118	-0.0078322	0.0013784	NaN	23.037	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	324450			26846	6581	18101	18111							0.07184775879522931
LFLTAVPP	8	Unmodified	_LFLTAVPP_					0	0	0		ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	429.260197	856.50584	0.73411	0.00031512	-0.0054639	-2.3454E-06	0.72864	0.00031278	429.2601540078664	111.79	0.64393	111.86	111.5	112.15	0.069542	-0.052269	9.3865E-05	NaN	23.037	43	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	789540			26847	6581	18101	18111							0.07184775879522931
LFLTAVPP	8	Unmodified	_LFLTAVPP_					0	0	0		ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	429.260197	856.50584	2.1516	0.00092358	-1.8732	-0.0008041	0.27834	0.00011948	429.2594339528687	111.61	0.82312	111.65	111.22	112.05	0.041832	-0.26137	-0.0015096	NaN	23.037	32	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	533000			26848	6581	18101	18111							0.07184775879522931
LFLTAVPP	8	Unmodified	_LFLTAVPP_					0	0	0		ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	429.260197	856.50584	5.9522	0.002555	-5.6012	-0.0024044	0.35103	0.00015068	429.2575860973051	111.86	0.21431	111.89	111.76	111.97	0.032707	-0.018943	-0.0047102	NaN	23.037	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127710			26849	6581	18101	18111							0.07184775879522931
LFLTKVGP	8	Unmodified	_LFLTKVGP_					0	0	0			REV__nc|ENSG00000132692|Q96GW7-2|BCAN	REV__nc|ENSG00000132692|Q96GW7-2|BCAN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26312255859375	2	437.773471	873.53239	-1.3568	-0.00059395	-3.3368	-0.0014608	-4.6936	-0.0020547	437.77186279526194	39.847	1.4674	39.803	39.08	40.547	-0.043697					49	34	2	0	0	0	0.4196	1	2890	2890		44.117	19.914	1	76546	+		26850	19022	18102	18112	30567	30567					0.09056464770844741
LFLVFLLARI	10	Unmodified	_LFLVFLLARI_					0	0	0			REV__nc|ENSG00000284723|Q8NH09|OR8S1	REV__nc|ENSG00000284723|Q8NH09|OR8S1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.5665283203125	3	402.265394	1203.77435	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.702	1	15.622	15.122	16.122	-0.080017								0	0	0	0.45132	1	45	45		22.58	0	1		+		26851	30279	18103	18113	30568	30568					0.18061495126994487
LFLVVGFI	8	Unmodified	_LFLVVGFI_					0	0	0			REV__ENSG00000221955|ENST00000469902|SLC12A8	REV__ENSG00000221955|ENST00000469902|SLC12A8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	454.2423400878906	2	454.286214	906.557876	-1.6071	-0.00073006	0.9609	0.00043652	-0.64615	-0.00029354	454.28639623418053	83.903	1.3839	84.041	82.968	84.352	0.13811					47	31	2	0	0	0	0.4196	1	7974	7974		54.895	11.269	1	77012	+		26852	23719	18104	18114	30569	30569					0.1008593929327617
LFLWGQRRKRR	11	Unmodified	_LFLWGQRRKRR_					0	0	0			REV__ENST00000601072.1_1_19:53703894-53707275:+|nuORF	REV__ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.97412109375	3	505.975899	1514.90587	0.14933	7.5555E-05	-3.3299	-0.0016849	-3.1806	-0.0016093	505.97413818936155	107.88	0.86302	107.92	107.11	107.97	0.035622					68	20	5	0	0	0	0.79224	1	11847	11847		12.957	1.0251	1	155850000	+		26853	29315	18105	18115	30570	30570					0.16901118267423954
LFLWGQRRKRR	11	Unmodified	_LFLWGQRRKRR_					0	0	0			REV__ENST00000601072.1_1_19:53703894-53707275:+|nuORF	REV__ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.9742431640625	3	505.975899	1514.90587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.86	1	112.88	112.38	113.38	0.028854								0	0	0	0.56276	1	12320	12320		12.957	1.5029	1		+		26854	29315	18105	18115	30571	30571					0.16901118267423954
LFLWGQRRKRR	11	Unmodified	_LFLWGQRRKRR_					0	0	0			REV__ENST00000601072.1_1_19:53703894-53707275:+|nuORF	REV__ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.97509765625	3	505.975899	1514.90587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113	1	113.03	112.53	113.53	0.027908								0	0	0	0.56276	1	12339	12339		8.4073	1.7476	1		+		26855	29315	18105	18115	30572	30572					0.16901118267423954
LFLWGQRRKRR	11	Unmodified	_LFLWGQRRKRR_					0	0	0			REV__ENST00000601072.1_1_19:53703894-53707275:+|nuORF	REV__ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.97430419921875	3	505.975899	1514.90587	-1.5955	-0.00080729	-1.4014	-0.00070907	-2.9969	-0.0015164	505.97512863626235	107.88	0.72025	107.92	107.25	107.97	0.036125					62	17	5	0	0	0	0.7896	1	11520	11520		13.508	0.55046	1	242270000	+		26856	29315	18105	18115	30573	30573					0.16901118267423954
LFLWGQRRKRR	11	Unmodified	_LFLWGQRRKRR_					0	0	0			REV__ENST00000601072.1_1_19:53703894-53707275:+|nuORF	REV__ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.9734191894531	3	505.975899	1514.90587	-1.5955	-0.00080729	-1.6675	-0.00084369	-3.263	-0.001651	506.309131074755	113.32	6.698	113.27	113.24	119.94	-0.044777					363	158	3	0	0	0	0.81219	1	12114	12114		8.7993	2.4784	1	2142200	+		26857	29315	18105	18115	30574	30574					0.16901118267423954
LFMKILFRSSR	11	Unmodified	_LFMKILFRSSR_					0	0	0		ENST00000491720.5_1_2:182783382-182783506:+|nuORF	ENST00000491720.5_1_2:182783382-182783506:+|nuORF	ENST00000491720.5_1_2:182783382-182783506:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.60833740234375	3	466.607713	1396.80131	-0.93039	-0.00043413	1.4041	0.00065517	0.47372	0.00022104	466.6082212965859	101	2.1787	101	99.472	101.65	0					144	51	4	0	0	0	0.77803	1	10154	10154		15.921	2.4127	1	331070			26858	12688	18106	18116	30575	30575					0.11878235675862925
LFMMTQVLK	9	Unmodified	_LFMMTQVLK_					0	0	0			REV__ENSG00000113300|ENST00000261951|CNOT6	REV__ENSG00000113300|ENST00000261951|CNOT6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.8058471679688	2	555.806131	1109.59771	-0.89307	-0.00049637	1.03	0.00057248	0.13693	7.6104E-05	555.806604901083	59.553	0.91605	59.54	59.196	60.112	-0.013729					63	24	4	0	0	0	0.31972	1	5479	5479		63.306	3.0123	1	365910	+		26859	17988	18107	18117	30576	30576					0.04729374910016304
LFMRRRHIVR	10	Unmodified	_LFMRRRHIVR_					0	0	0		ENSG00000146648|ENST00000275493|EGFR	ENSG00000146648|ENST00000275493|EGFR	ENSG00000146648|ENST00000275493|EGFR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.9481201171875	3	461.947063	1382.81936	0.76575	0.00035374	1.6333	0.0007545	2.399	0.0011082	461.94782502952427	107.84	0.75671	107.93	107.26	108.01	0.084404					86	18	6	0	0	0	0.85259	1	11549	11549		20.03	1.4994	1	101570000			26860	4854	18108	18118	30577	30577					0.1432641544120088
LFMTLAWIY	9	Unmodified	_LFMTLAWIY_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1;ENST00000494467.1_1_9:107587931-107593243:-|nuORF	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.320556640625	2	579.306821	1156.59909	-1.3569	-0.00078604	3.6428	0.0021103	2.2859	0.0013242	579.3086255927215	92.3	1.6839	92.486	91.743	93.427	0.18582					53	39	2	0	0	0	0.20789	1	9235	9235		25.45	6.3466	1	96592			26861	6039	18109	18119	30578	30578					0.027053322704432503
LFNVVTKDM	9	Oxidation (M)	_LFNVVTKDM(Oxidation (M))_		LFNVVTKDM(1)		LFNVVTKDM(88)	0	0	1		ENST00000395615.5_2_17:19246634-19247117:-|nuORF;ENST00000477478.6_2_17:19246634-19246829:-|nuORF;ENSG00000108641|ENST00000261499|B9D1	ENST00000395615.5_2_17:19246634-19247117:-|nuORF	ENST00000395615.5_2_17:19246634-19247117:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.2864379882812	2	541.781167	1081.54778	-0.34472	-0.00018676	2.0171	0.0010928	1.6724	0.00090606	542.2837952148026	74.262	1.4917	74.821	74.283	75.775	0.55891					81	35	4	0	0	0	0.12652	1	8393	8393		87.754	7.8151	1	471090			26862	2422	18110	18120	30579	30579		47			0.010269635057284177
LFPEKALSLHQ	11	Unmodified	_LFPEKALSLHQ_					0	0	0		ENST00000311177.6_1_17:46700370-46700481:-|nuORF	ENST00000311177.6_1_17:46700370-46700481:-|nuORF	ENST00000311177.6_1_17:46700370-46700481:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8610229492188	2	641.861338	1281.70812	1.706	0.001095	-4.3678	-0.0028035	-2.6617	-0.0017085	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.53361	2	12651	12651;12821		49.536	5.1589	1	27133000			26863	9923	18111	18121	30580;30581	30580					0.07853634494290418
LFPGGLRG	8	Unmodified	_LFPGGLRG_					0	0	0			REV__ENST00000366756.3_1_6:170594489-170594751:-|nuORF	REV__ENST00000366756.3_1_6:170594489-170594751:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.73931884765625	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.87276	1	2057	2057		29.842	0	1	1364200	+		26864	25534	18112	18122	30582	30582					0.05025854279756459
LFPHRAAVRRV	11	Unmodified	_LFPHRAAVRRV_					0	0	0		ENST00000503548.1_1_4:1379569-1379746:+|nuORF	ENST00000503548.1_1_4:1379569-1379746:+|nuORF	ENST00000503548.1_1_4:1379569-1379746:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.2675476074219	3	441.270312	1320.78911	-1.6751	-0.00073916	-4.0125	-0.0017706	-5.6876	-0.0025098	441.2684684411322	54.179	1.9778	54.179	52.948	54.926	0					100	63	2	0	0	0	0.7896	1	4532	4532		13.508	1.0751	1	175330			26865	12883	18113	18123	30583	30583					0.1415438004767111
LFPLGGRL	8	Unmodified	_LFPLGGRL_					0	0	0			REV__ENST00000334512.9_1_10:81073174-81073993:+|nuORF	REV__ENST00000334512.9_1_10:81073174-81073993:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.265380859375	2	436.771263	871.527973	1.76	0.0007687	3.0034	0.0013118	4.7633	0.0020805	436.7727883819092	27.072	0.66235	27.045	26.605	27.267	-0.027706					26	16	2	0	0	0	0.4196	1	1157	1157		13.775	0	1	43317	+		26866	25156	18114	18124	30584	30584					0.08707000347953908
LFPLIGSDLF	10	Unmodified	_LFPLIGSDLF_					0	0	0		ENST00000463593.6_1_9:95060120-95060712:-|nuORF	ENST00000463593.6_1_9:95060120-95060712:-|nuORF	ENST00000463593.6_1_9:95060120-95060712:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3150634765625	2	561.3157	1120.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.936	1	77.336	76.836	77.836	0.39969								0	0	0	0.45132	1	8742	8742		44.117	8.4985	1				26867	12071	18115	18125	30585	30585					0.06136370796934898
LFPLLARHSLA	11	Unmodified	_LFPLLARHSLA_					0	0	0			REV__ENST00000419296.1_1_2:110752028-110752415:+|nuORF	REV__ENST00000419296.1_1_2:110752028-110752415:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.372314453125	2	619.374415	1236.73428	-1.2262	-0.00075948	-3.0346	-0.0018796	-4.2608	-0.0026391	619.3724290211392	101.55	1.3094	101.7	101.32	102.63	0.15505					84	32	4	0	0	0	0.6921	1	10609	10609		32.812	8.2932	1	1786600	+		26868	26472	18116	18126	30586	30586					0.1253794845642915
LFPRGGVA	8	Unmodified	_LFPRGGVA_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.7396240234375	2	408.739963	815.465373	-1.0833	-0.00044277	0.59228	0.00024209	-0.49098	-0.00020068	408.74010288341543	37.409	2.2746	37.356	36.961	39.236	-0.053558					112	51	3	0	0	0	0.82464	1	2526	2526		21.702	0	1	289290			26869	5146	18117	18127	30587	30587					0.05025854279756459
LFPRGGVA	8	Unmodified	_LFPRGGVA_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.73931884765625	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.89457	1	1963	1963		37.028	6.5248	1	1448600			26870	5146	18117	18127	30588	30588					0.05025854279756459
LFPRKLDLV	9	Unmodified	_LFPRKLDLV_					0	0	0			REV__ENSG00000169021|ENST00000304863|UQCRFS1	REV__ENSG00000169021|ENST00000304863|UQCRFS1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.8399047851562	2	550.844959	1099.67537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.264	1	16.264	15.764	16.764	0								0	0	0	0.29475	1	108	108		32.812	2.4947	1		+		26871	21542	18118	18128	30589	30589					0.12951472162058053
LFQKFDTFRIL	11	Unmodified	_LFQKFDTFRIL_					0	0	0		nc|ENSG00000077044|Q16760-2|DGKD;ENSG00000077044|ENST00000264057|DGKD;ENST00000474488.1_1_2:234343429-234350860:+|nuORF;ENST00000490764.5_1_2:234327938-234366271:+|nuORF	nc|ENSG00000077044|Q16760-2|DGKD	nc|ENSG00000077044|Q16760-2|DGKD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.60626220703125	3	476.606367	1426.79727	-2.0432	-0.00097378	2.7211	0.0012969	0.67797	0.00032312	476.6076307351805	16.045	0.20598	16.045	15.918	16.124	0					13	9	2	0	0	0	0.71207	1	88	88		29.551	5.3189	1	61908			26872	1370	18119	18129	30590	30590					0.10094469453792954
LFQRVVYRL	9	Unmodified	_LFQRVVYRL_					0	0	0		ENST00000299427.10_2_11:6635118-6635532:-|nuORF	ENST00000299427.10_2_11:6635118-6635532:-|nuORF	ENST00000299427.10_2_11:6635118-6635532:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.3576049804688	2	597.361308	1192.70806	-1.2979	-0.00077532	-4.1559	-0.0024826	-5.4539	-0.0032579	597.3583970456502	100.18	2.7493	100.35	98.666	101.42	0.17199					156	64	4	0	0	0	0.69914	1	10352	10352		40.573	8.6178	1	2737400			26873	9782	18120	18130	30591	30591					0.11941679284950624
LFQTKESLAK	10	Unmodified	_LFQTKESLAK_					0	0	0			REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8336791992188	2	582.834788	1163.65502	0.11318	6.5963E-05	-3.7555	-0.0021889	-3.6424	-0.0021229	582.8325626554922	94.252	3.4585	94.298	93.323	96.781	0.046173					208	81	3	0	0	0	0.86587	1	9948	9948		29.17	1.2878	1	743970	+		26874	18928	18121	18131	30592	30592					0.07974256711599992
LFQVPLLRFQH	11	Unmodified	_LFQVPLLRFQH_					0	0	0			REV__nc|ENSG00000165731|P07949-2|RET	REV__nc|ENSG00000165731|P07949-2|RET	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.6083679199219	3	466.60659	1396.79794	0.32068	0.00014963	2.6768	0.001249	2.9975	0.0013986	466.60769889886956	100.37	2.2833	100.42	99.018	101.3	0.046356					147	53	4	0	0	0	0.74405	1	10753	10753		23.378	1.5975	1	458180	+		26875	21211	18122	18132	30593	30593					0.11541308893515634
LFRHVITP	8	Unmodified	_LFRHVITP_					0	0	0			REV__nc|ENSG00000146414|Q149N8-4|SHPRH	REV__nc|ENSG00000146414|Q149N8-4|SHPRH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7958679199219	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.884	1	4165	4165		33.516	6.7195	1	581270	+		26876	20015	18123	18133	30594	30594					0.08446074267976655
LFRHVITP	8	Unmodified	_LFRHVITP_					0	0	0			REV__nc|ENSG00000146414|Q149N8-4|SHPRH	REV__nc|ENSG00000146414|Q149N8-4|SHPRH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79620361328125	2	491.795269	981.575986	-0.22794	-0.0001121	1.0719	0.00052718	0.84401	0.00041508	491.795700180553	50.73	2.2718	51.177	50.348	52.62	0.4476					135	54	3	0	0	0	0.90465	1	5115	5115		40.573	5.3719	1	1342800	+		26877	20015	18123	18133	30595	30595					0.08446074267976655
LFRIKKISF	9	Unmodified	_LFRIKKISF_					0	0	0			REV__ENSG00000105671|ENST00000247003|DDX49	REV__ENSG00000105671|ENST00000247003|DDX49	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.7529907226562	2	576.368601	1150.72265	-0.68429	-0.0003944	1.102	0.00063518	0.41775	0.00024078	576.3691535356652	54.617	0.92387	55.185	54.901	55.824	0.56836					24	21	2	0	0	0	0.20789	1	5616	5616		27.882	8.5223	1	116460	+		26878	17560	18124	18134	30596	30596					0.15331751433086538
LFRIKKISF	9	Unmodified	_LFRIKKISF_					0	0	0			REV__ENSG00000105671|ENST00000247003|DDX49	REV__ENSG00000105671|ENST00000247003|DDX49	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	576.368601	1150.72265	0.54795	0.00031582	0.72975	0.00042061	1.2777	0.00073643	576.3688111454044	54.884	1.0758	54.939	54.653	55.729	0.055614	-0.12312	-0.00018142	NaN	53.351	51	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147930	+		26879	17560	18124	18134							0.15331751433086538
LFRKTFKS	8	Unmodified	_LFRKTFKS_					0	0	0		ENST00000515330.5_1_4:113345070-113346839:+|nuORF	ENST00000515330.5_1_4:113345070-113346839:+|nuORF	ENST00000515330.5_1_4:113345070-113346839:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8087768554688	2	513.808377	1025.6022	0.090877	4.6693E-05	1.0576	0.00054341	1.1485	0.00059011	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.82658	1	4221	4221		21.96	0	1	1448700			26880	13082	18125	18135	30597	30597					0.09042343439477918
LFRLRCRR	8	Unmodified	_LFRLRCRR_					0	0	0		chr17:51166572-51166827|38|1279.55|0.0|26.93|+|1|None,NME2|1	chr17:51166572-51166827|38|1279.55|0.0|26.93|+|1|None,NME2|1	chr17:51166572-51166827|38|1279.55|0.0|26.93|+|1|None,NME2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8403930664062	2	560.337644	1118.66074	3.1454	0.0017625	1.6621	0.00093135	4.8075	0.0026938	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.82419	1	13225	13225		13.775	0.81615	1	151040			26881	233	18126	18136	30598	30598					0.10615121532964622
LFRQLAPRAK	10	Unmodified	_LFRQLAPRAK_					0	0	0		ENSG00000109610|ENST00000382120|SOD3	ENSG00000109610|ENST00000382120|SOD3	ENSG00000109610|ENST00000382120|SOD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.9188232421875	3	400.583897	1198.72986	0.57912	0.00023199	-0.2451	-9.8183E-05	0.33402	0.0001338	400.5838627795449	24.287	0.98159	24.343	23.961	24.942	0.055487					52	24	3	0	0	0	0.86446	1	886	886		30.569	1.9921	1	65016			26882	2469	18127	18137	30599	30599					0.13844484033506887
LFRRRRNDRRR	11	Unmodified	_LFRRRRNDRRR_					0	0	0		ENSG00000134030|ENST00000256413|CTIF;nc|ENSG00000134030|O43310-2|CTIF	ENSG00000134030|ENST00000256413|CTIF	ENSG00000134030|ENST00000256413|CTIF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.6531982421875	3	534.32084	1599.94069	0.67707	0.00036177	0.96513	0.00051569	1.6422	0.00087746	534.3214445690858	17.085	0.26162	16.602	16.457	16.718	-0.48256					7	5	2	0	0	0	0.18353	1	218	218		5.1424	3.8204	1	59996			26883	3908	18128	18138	30600	30600					0.16471754128087923
LFRRTVSS	8	Unmodified	_LFRRTVSS_					0	0	0		ENSG00000116032|ENST00000234389|GRIN3B	ENSG00000116032|ENST00000234389|GRIN3B	ENSG00000116032|ENST00000234389|GRIN3B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.2375183105469	2	483.279983	964.545414	-1.2703	-0.00061389	-0.38282	-0.00018501	-1.6531	-0.0007989	483.27979511774066	39.794	0.12849	39.75	39.666	39.794	-0.043697					4	2	2	0	0	0	0.4196	1	2881	2881		24.203	1.1603	1	34844			26884	2894	18129	18139	30601	30601					0.06172295882947765
LFRVKAIACV	10	Unmodified	_LFRVKAIACV_					0	0	0			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3403930664062	2	560.338987	1118.66342	-1.4184	-0.0007948	4.1703	0.0023368	2.7519	0.001542	560.3412485593329	105.6	1.2349	105.67	104.77	106	0.073112					105	30	5	0	0	0	0.86589	1	11208	11208		29.15	1.2673	1	1607400	+		26885	20376	18130	18140	30602	30602					0.10883532147227015
LFRVKAIACV	10	Unmodified	_LFRVKAIACV_					0	0	0			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3399047851562	2	560.338987	1118.66342	-1.4185	-0.00079484	3.8922	0.0021809	2.4736	0.0013861	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.8488	1	12799	12799		17.365	0.89182	1	4071000	+		26886	20376	18130	18140	30603	30603					0.10883532147227015
LFRVNMSE	8	Unmodified	_LFRVNMSE_					0	0	0		nc|ENSG00000120685|Q86XN7-2|PROSER1;ENSG00000120685|ENST00000352251|PROSER1	nc|ENSG00000120685|Q86XN7-2|PROSER1	nc|ENSG00000120685|Q86XN7-2|PROSER1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.25067138671875	2	498.252577	994.490601	-0.99209	-0.00049431	-3.1151	-0.0015521	-4.1072	-0.0020464	498.25142789231467	84.759	2.4523	84.759	83.586	86.038	0					132	57	3	0	0	0	0.87922	1	7987	7987		31.955	5.1588	1	112180			26887	3142	18131	18141	30604	30604					-0.006864589799761234
LFSAKKQAVW	10	Unmodified	_LFSAKKQAVW_					0	0	0			REV__ENST00000457507.1_1_1:99473841-99474009:+|nuORF	REV__ENST00000457507.1_1_1:99473841-99474009:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3421020507812	2	589.340041	1176.66553	0.81285	0.00047905	3.7357	0.0022016	4.5485	0.0026806	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.67571	1	9429	9429		45.972	9.5255	1	6450100	+		26888	26970	18132	18142	30605	30605					0.0842628415668969
LFSAPKRGN	9	Unmodified	_LFSAPKRGN_					0	0	0			REV__ENST00000307241.5_1_12:94942028-94943309:+|nuORF	REV__ENST00000307241.5_1_12:94942028-94943309:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2794494628906	2	495.279983	988.545414	-0.38216	-0.00018927	-0.77411	-0.0003834	-1.1563	-0.00057268	495.27942684811313	70.447	0.71214	70.994	70.654	71.366	0.54756					39	17	3	0	0	0	0.67345	1	7848	7848		42.396	0.96952	1	310280	+		26889	24841	18133	18143	30606	30606					0.050682958829384006
LFSFCPVLK	9	Carbamidomethyl (C)	_LFSFC(Carbamidomethyl (C))PVLK_	LFSFC(1)PVLK		LFSFC(63)PVLK		0	1	0			REV__ENST00000477973.3_2_3:72426341-72426569:-|nuORF	REV__ENST00000477973.3_2_3:72426341-72426569:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.8092651367188	2	555.804445	1109.59434	-1.0593	-0.00058879	4.4214	0.0024574	3.3621	0.0018686	555.8068254201057	59.586	0.60949	59.586	59.286	59.895	0					39	22	2	0	0	0	0.31972	1	5190	5190		63.306	8.53	1	180100	+		26890	27368	18134	18144	30607	30607	333				0.04392448127669013
LFSFNSSL	8	Unmodified	_LFSFNSSL_					0	0	0		nc|ENSG00000152439|Q6PK81-2|ZNF773;ENSG00000152439|ENST00000282292|ZNF773;ENST00000523439.1_1_19:58003464-58005455:+|nuORF;nc|ENSG00000105136|Q96HQ0-6|ZNF419;nc|ENSG00000105136|Q96HQ0-2|ZNF419;nc|ENSG00000105136|Q96HQ0-3|ZNF419;nc|ENSG00000105136|Q96HQ0-4|ZNF419;ENSG00000105136|ENST00000221735|ZNF419;nc|ENSG00000105136|Q96HQ0-5|ZNF419	nc|ENSG00000152439|Q6PK81-2|ZNF773	nc|ENSG00000152439|Q6PK81-2|ZNF773	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.733154296875	2	457.734543	913.454533	-1.44	-0.00065913	-2.8992	-0.0013271	-4.3392	-0.0019862	457.73309874715005	31.115	0.74627	31.195	30.811	31.558	0.079834					33	16	3	0	0	0	0.83456	1	2085	2085		60.972	0.56831	1	364700			26891	2188	18135	18145	30608	30608					-0.005655928851979297
LFSFNSSL	8	Unmodified	_LFSFNSSL_					0	0	0		nc|ENSG00000152439|Q6PK81-2|ZNF773;ENSG00000152439|ENST00000282292|ZNF773;ENST00000523439.1_1_19:58003464-58005455:+|nuORF;nc|ENSG00000105136|Q96HQ0-6|ZNF419;nc|ENSG00000105136|Q96HQ0-2|ZNF419;nc|ENSG00000105136|Q96HQ0-3|ZNF419;nc|ENSG00000105136|Q96HQ0-4|ZNF419;ENSG00000105136|ENST00000221735|ZNF419;nc|ENSG00000105136|Q96HQ0-5|ZNF419	nc|ENSG00000152439|Q6PK81-2|ZNF773	nc|ENSG00000152439|Q6PK81-2|ZNF773	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	457.734543	913.454533	0.15264	6.9871E-05	-4.5566	-0.0020857	-4.404	-0.0020159	457.7323167545528	31.076	0.95124	31.08	30.535	31.486	0.0037212	-0.057314	-0.00080061	NaN	60.972	30	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	470640			26892	2188	18135	18145							-0.005655928851979297
LFSKALPVKDV	11	Unmodified	_LFSKALPVKDV_					0	0	0		ENST00000483092.1_1_1:229460984-229462796:-|nuORF	ENST00000483092.1_1_1:229460984-229462796:-|nuORF	ENST00000483092.1_1_1:229460984-229462796:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2472839355469	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.12	1	118.09	117.59	118.59	-0.024208								0	0	0	0.56276	1	13081	13081		26.75	2.5179	1				26893	12503	18136	18146	30609	30609					0.12347706642390222
LFSKSRVRATT	11	Unmodified	_LFSKSRVRATT_					0	0	0			REV__ENSG00000120907|ENST00000380573|ADRA1A	REV__ENSG00000120907|ENST00000380573|ADRA1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.368408203125	2	633.369861	1264.72517	1.5976	0.0010119	-2.7562	-0.0017457	-1.1585	-0.00073377	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.71394	1	11800	11800		32.751	0	1	10012000	+		26894	18436	18137	18147	30610	30610					0.1033955510006308
LFSKSRVRATT	11	Unmodified	_LFSKSRVRATT_					0	0	0			REV__ENSG00000120907|ENST00000380573|ADRA1A	REV__ENSG00000120907|ENST00000380573|ADRA1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3688354492188	2	633.369861	1264.72517	2.3091	0.0014625	-3.4627	-0.0021932	-1.1537	-0.00073069	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.69071	1	11893	11893		30.318	0	1	10333000	+		26895	18436	18137	18147	30611	30611					0.1033955510006308
LFSRTQFRDW	10	Unmodified	_LFSRTQFRDW_					0	0	0			REV__ENSG00000164500|ENST00000297001|SPATA48	REV__ENSG00000164500|ENST00000297001|SPATA48	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.56524658203125	3	452.566683	1354.67822	0.20029	9.0647E-05	-3.3252	-0.0015049	-3.1249	-0.0014142	452.56515226637106	18.527	1.0431	17.905	17.631	18.674	-0.62141					57	23	4	0	0	0	0.85979	1	412	412		35.178	2.1388	1	840520	+		26896	21088	18138	18148	30612	30612					0.015066955489373868
LFSYYGPQE	9	Unmodified	_LFSYYGPQE_					0	0	0		nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-5|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.2536010742188	2	552.25584	1102.49713	1.2806	0.00070722	-4.3806	-0.0024192	-3.1	-0.001712	552.2532948797596	111.44	1.2081	111.47	110.85	112.06	0.030388					69	46	2	0	0	0	0.7932	1	12207	12207		23.042	1.0826	1	33256			26897	8070	18139	18149	30613	30613					-0.050022425476072385
LFTDGEYIN	9	Unmodified	_LFTDGEYIN_					0	0	0		nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.2538452148438	2	536.253297	1070.49204	-0.18867	-0.00010118	0.11457	6.1439E-05	-0.074102	-3.9738E-05	536.2534618025845	79.483	1.8229	79.899	79.232	81.055	0.41621					80	42	3	0	0	0	0.18601	1	9090	9090		76.774	7.9873	1	764650			26898	687	18140	18150	30614	30614					-0.04038546410242816
LFTIEKVQQ	9	Unmodified	_LFTIEKVQQ_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000006074	REV__CON__ENSEMBL:ENSBTAP00000006074	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3162231445312	2	553.316232	1104.61791	-0.45835	-0.00025361	1.0333	0.00057176	0.57498	0.00031814	553.316772900447	75.139	1.0421	75.534	75.279	76.321	0.39507					55	24	4	0	0	0	0.057432	1	8488	8488		104.75	3.1458	1	1004000	+	+	26899	15958	18141	18151	30615	30615					0.06978585165848017
LFTLGTLQGVG	11	Unmodified	_LFTLGTLQGVG_					0	0	0		ENST00000523357.5_2_8:28040756-28047239:+|nuORF	ENST00000523357.5_2_8:28040756-28047239:+|nuORF	ENST00000523357.5_2_8:28040756-28047239:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.316162109375	2	553.316232	1104.61791	-0.13159	-7.2811E-05	0.61579	0.00034073	0.4842	0.00026792	553.3165485603674	74.96	1.0987	75.525	75.249	76.347	0.56458					56	26	3	0	0	0	0.10023	1	8497	8497		93.143	0	1	984510			26900	13200	18142	18152	30616	30616					0.06978585165848017
LFTLPLLHY	9	Unmodified	_LFTLPLLHY_					0	0	0		ENSG00000130764|ENST00000378251|LRRC47	ENSG00000130764|ENST00000378251|LRRC47	ENSG00000130764|ENST00000378251|LRRC47	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.8274536132812	2	558.826235	1115.63792	0.54227	0.00030303	1.8076	0.0010101	2.3499	0.0013132	558.8270788405256	65.54	0.60555	65.665	65.338	65.944	0.12532					65	32	3	0	0	0	0.7932	1	5830	5830		25.45	3.4903	1	2467400			26901	3680	18143	18153	30617	30617					0.08472380896478171
LFTRREHVKRH	11	Unmodified	_LFTRREHVKRH_					0	0	0		nc|ENSG00000205189|Q96DT7-4|ZBTB10;nc|ENSG00000205189|Q96DT7-3|ZBTB10;nc|ENSG00000205189|Q96DT7-2|ZBTB10;ENSG00000205189|ENST00000455036|ZBTB10	nc|ENSG00000205189|Q96DT7-4|ZBTB10	nc|ENSG00000205189|Q96DT7-4|ZBTB10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.62060546875	3	493.619892	1477.83785	-0.71923	-0.00035502	3.2974	0.0016276	2.5781	0.0012726	493.6213113585242	30.757	0.97104	30.82	30.436	31.408	0.063122					105	47	4	0	0	0	0.75121	1	1385	1385		21.78	1.4654	1	228820			26902	8515	18144	18154	30618	30618					0.11804248616772384
LFTSLLLRPPP	11	Unmodified	_LFTSLLLRPPP_					0	0	0		nc|ENSG00000122126|Q01968-2|OCRL;ENSG00000122126|ENST00000371113|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.383056640625	2	627.384448	1252.75434	-0.21859	-0.00013714	-2.9621	-0.0018584	-3.1807	-0.0019955	627.3823747340618	111.34	0.42085	111.28	111.08	111.5	-0.059937					29	12	4	0	0	0	0.7144	1	12124	12124		29.17	1.2878	1	5771700			26903	3211	18145	18155	30619	30619					0.13807699396375028
LFTSLLLRPPP	11	Unmodified	_LFTSLLLRPPP_					0	0	0		nc|ENSG00000122126|Q01968-2|OCRL;ENSG00000122126|ENST00000371113|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.38330078125	2	627.384448	1252.75434	-0.21902	-0.00013741	-3.0012	-0.0018829	-3.2202	-0.0020203	627.3824199275489	117.28	0.27765	117.21	117	117.28	-0.075302					26	9	4	0	0	0	0.72918	1	12584	12584		26.693	1.1189	1	4893700			26904	3211	18145	18155	30620	30620					0.13807699396375028
LFTSLLLRPPP	11	Unmodified	_LFTSLLLRPPP_					0	0	0		nc|ENSG00000122126|Q01968-2|OCRL;ENSG00000122126|ENST00000371113|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.38720703125	2	627.384448	1252.75434	-0.21894	-0.00013736	-2.589	-0.0016243	-2.8079	-0.0017617	627.3824303032922	119.2	0.063141	119.12	119.06	119.13	-0.07531					6	2	3	0	0	0	0.69995	1	12782	12782		31.53	1.2121	1	419460			26905	3211	18145	18155	30621	30621					0.13807699396375028
LFTTYIIM	8	Oxidation (M)	_LFTTYIIM(Oxidation (M))_		LFTTYIIM(1)		LFTTYIIM(55)	0	0	1		chr1:239827081-239827252|16|11.0|0.61|4.18|+|ENST00000675709|CHRM3,CHRM3;ENSG00000133019|ENST00000676153|CHRM3	chr1:239827081-239827252|16|11.0|0.61|4.18|+|ENST00000675709|CHRM3,CHRM3	chr1:239827081-239827252|16|11.0|0.61|4.18|+|ENST00000675709|CHRM3,CHRM3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.2732849121094	2	509.269904	1016.52526	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.457	1	67.474	66.974	67.974	0.016205								0	0	0	0.28381	1	6337	6337		54.765	12.369	1				26906	43	18146	18156	30622	30622		0			0.017653641081324167
LFTVRGVALY	10	Unmodified	_LFTVRGVALY_					0	0	0		ENST00000338051.4_1_5:134193097-134193166:+|nuORF	ENST00000338051.4_1_5:134193097-134193166:+|nuORF	ENST00000338051.4_1_5:134193097-134193166:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.8334350585938	2	569.834591	1137.65463	1.1831	0.00067415	-1.2966	-0.00073884	-0.11352	-6.4686E-05	569.8337831453182	57.466	1.5319	58.021	57.642	59.174	0.55513					116	37	5	0	0	0	0.43769	1	6043	6043		60.972	3.1607	1	15184000			26907	10195	18147	18157	30623	30623					0.09130881782425604
LFTVSHRKS	9	Unmodified	_LFTVSHRKS_					0	0	0		ENSG00000117528|ENST00000370214|ABCD3;nc|ENSG00000117528|P28288-2|ABCD3	ENSG00000117528|ENST00000370214|ABCD3	ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.8049926757812	2	537.806365	1073.59818	-1.206	-0.00064858	0.96746	0.0005203	-0.23851	-0.00012827	537.8068072259658	58.499	0.79393	58.891	58.44	59.234	0.39209					32	18	2	0	0	0	0.64555	1	6117	6117		44.377	0	1	645250			26908	2985	18148	18158	30624	30624					0.0643225394574074
LFTYLVKGRP	10	Unmodified	_LFTYLVKGRP_					0	0	0			REV__ENSG00000168612|ENST00000372523|ZSWIM1	REV__ENSG00000168612|ENST00000372523|ZSWIM1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3565063476562	2	597.355691	1192.69683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.055	1	95.475	94.975	95.975	0.41964								0	0	0	0.45132	1	11403	11403		27.882	0	1		+		26909	21504	18149	18159	30625	30625					0.10818857190793096
LFVAQKRFIKV	11	Unmodified	_LFVAQKRFIKV_					0	0	0			REV__ENSG00000130449|ENST00000252744|ZSWIM6	REV__ENSG00000130449|ENST00000252744|ZSWIM6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.2478942871094	3	450.286969	1347.83908	0.45491	0.00020484	-4.274	-0.0019245	-3.8191	-0.0017197	450.28560691954675	67.665	0.085724	67.793	67.743	67.829	0.12749					5	3	2	0	0	0	0.17863	1	6053	6053		9.6461	0	1	17622	+		26910	18875	18150	18160	30626	30626					0.17907069932971353
LFVCEWGWLL	10	Unmodified	_LFVCEWGWLL_					0	0	0			REV__ENST00000324225.8_1_11:117067889-117068036:+|nuORF	REV__ENST00000324225.8_1_11:117067889-117068036:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2310485839844	3	422.551094	1264.63145	0.71932	0.00030395	-4.4843	-0.0018949	-3.765	-0.0015909	423.21575898034183	33.231	0.5503	33.4	33.187	33.737	0.16971					16	12	3	0	0	0	0.37624	1	2414	2414		29.17	1.5261	1	130190	+		26911	25043	18151	18161	30627	30627					0.009721196734517434
LFVFRCPPD	9	Unmodified	_LFVFRCPPD_					0	0	0		ENST00000513342.5_1_17:46990150-47004493:+|nuORF;nc|ENSG00000159202|Q9H832-2|UBE2Z;ENSG00000159202|ENST00000360943|UBE2Z	ENST00000513342.5_1_17:46990150-47004493:+|nuORF	ENST00000513342.5_1_17:46990150-47004493:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.2815551757812	2	547.278595	1092.54264	-0.40224	-0.00022014	2.4288	0.0013292	2.0265	0.0011091	547.2799131640894	53.631	0.91662	54.045	53.663	54.58	0.4139					36	21	2	0	0	0	0.17307	1	5432	5432		79.451	13.022	1	760690			26912	5515	18152	18162	30628	30628					6.704433781123953E-05
LFVGDVDKKL	10	Unmodified	_LFVGDVDKKL_					0	0	0			REV__nc|ENSG00000170423|Q8N1N4-2|KRT78	REV__nc|ENSG00000170423|Q8N1N4-2|KRT78	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.330322265625	2	567.331882	1132.64921	-0.468	-0.00026551	-2.8933	-0.0016415	-3.3613	-0.001907	567.330130226139	95.712	2.0668	95.712	95.357	97.424	0					107	47	3	0	0	0	0.8608	1	9485	9485		34.173	2.6427	1	608220	+	+	26913	16024	18153	18163	30629	30629					0.0881915819995811
LFVGVILLKTH	11	Unmodified	_LFVGVILLKTH_					0	0	0			REV__ENSG00000063127|ENST00000335875|SLC6A16	REV__ENSG00000063127|ENST00000335875|SLC6A16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.9325866699219	3	413.932303	1238.77508	0.19564	8.098E-05	0.55771	0.00023085	0.75334	0.00031183	413.93253835270247	43.14	1.6907	43.113	41.995	43.686	-0.026768					75	40	2	0	0	0	0.74405	1	3313	3313		23.378	2.5408	1	425020	+		26914	16468	18154	18164	30630	30630					0.16524289776043588
LFVIAMPVLYN	11	Unmodified	_LFVIAMPVLYN_					0	0	0		ENSG00000183862|ENST00000329903|CNGA2	ENSG00000183862|ENST00000329903|CNGA2	ENSG00000183862|ENST00000329903|CNGA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.359130859375	2	640.359585	1278.70462	-0.024279	-1.5547E-05	-0.91724	-0.00058736	-0.94152	-0.00060291	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.71452	1	10151	10151		29.15	5.6269	1	448130			26915	7568	18155	18165	30631	30631					0.07641248396066658
LFVILWSF	8	Unmodified	_LFVILWSF_					0	0	0			REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.249755859375	2	512.796946	1023.57934	-0.20709	-0.0001062	-4.0708	-0.0020875	-4.2779	-0.0021937	512.7948133658463	70.81	0.75427	71.194	70.832	71.586	0.38416					35	17	3	0	0	0	0.4196	1	7899	7899		46.766	4.3703	1	176320	+		26916	19131	18156	18166	30632	30632					0.0684932432199048
LFVLRRRRARR	11	Unmodified	_LFVLRRRRARR_					0	0	0			REV__nc|ENSG00000187260|Q86TI4-4|WDR86	REV__nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7462158203125	3	500.327043	1497.9593	-0.041425	-2.0726E-05	-0.37322	-0.00018673	-0.41464	-0.00020746	500.3272996804205	67.948	0.20781	68.496	68.409	68.617	0.54819					6	4	2	0	0	0	0.18372	1	7487	7487		1.4188	0.096825	1	43316	+		26917	30112	18157	18167	30633	30633					0.2302391576993159
LFVPGAEAV	9	Unmodified	_LFVPGAEAV_					0	0	0			REV__ENST00000342607.10_1_12:122213795-122213957:+|nuORF	REV__ENST00000342607.10_1_12:122213795-122213957:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.75006103515625	2	451.752736	901.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.024	1	33.968	33.468	34.468	-0.056385								0	0	0	0.29103	1	2108	2108		40.573	0	1		+		26918	25276	18158	18168	30634	30634					0.0362328401151899
LFVSVTADTRY	11	Unmodified	_LFVSVTADTRY_					0	0	0			REV__ENST00000471405.5_1_7:135366313-135386730:-|nuORF	REV__ENST00000471405.5_1_7:135366313-135386730:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.56072998046875	3	424.559194	1270.65575	1.4537	0.00061718	2.1704	0.00092146	3.6241	0.0015386	424.5601606035987	27.607	1.8639	27.352	26.945	28.809	-0.25465					132	44	5	0	0	0	0.71207	1	1649	1649		29.551	3.659	1	5946800	+		26919	15901	18159	18169	30635	30635					0.031250513606664754
LFVTGGVN	8	Unmodified	_LFVTGGVN_					0	0	0			REV__nc|ENSG00000100379|Q8N5Z5-2|KCTD17	REV__nc|ENSG00000100379|Q8N5Z5-2|KCTD17	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.92974853515625	2	403.723978	805.433404	2.377	0.00095965	-1.0909	-0.00044041	1.2861	0.00051924	403.72358302150406	47.625	0.48589	47.623	47.165	47.651	-0.0024452					21	14	2	0	0	0	0.4196	1	3912	3912		23.042	0	1	125100	+		26920	17185	18160	18170	30636	30636					0.022904418059511045
LFVTGGVN	8	Unmodified	_LFVTGGVN_					0	0	0			REV__nc|ENSG00000100379|Q8N5Z5-2|KCTD17	REV__nc|ENSG00000100379|Q8N5Z5-2|KCTD17	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9302062988281	2	403.723978	805.433404	0.25403	0.00010256	1.2946	0.00052265	1.5486	0.00062521	403.7244083926454	47.428	1.0896	47.466	47.115	48.205	0.037731					63	36	2	0	0	0	0.4196	1	3592	3592		45.952	15.448	1	501430	+		26921	17185	18160	18170	30637	30637					0.022904418059511045
LFVTGGVN	8	Unmodified	_LFVTGGVN_					0	0	0			REV__nc|ENSG00000100379|Q8N5Z5-2|KCTD17	REV__nc|ENSG00000100379|Q8N5Z5-2|KCTD17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.7239990234375	2	403.723978	805.433404	-1.1089	-0.00044771	1.5518	0.00062651	0.44287	0.0001788	403.7244510631445	64.933	1.6766	64.971	63.905	65.582	0.037849					135	64	4	0	0	0	0.93293	1	5774	5774		51.335	3.4199	1	1390300	+		26922	17185	18160	18170	30638	30638					0.022904418059511045
LFVVLEKKN	9	Unmodified	_LFVVLEKKN_					0	0	0		ENST00000379391.7_2_12:57450415-57450529:-|nuORF	ENST00000379391.7_2_12:57450415-57450529:-|nuORF	ENST00000379391.7_2_12:57450415-57450529:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3174438476562	2	545.336967	1088.65938	1.2597	0.00068695	-1.2782	-0.00069706	-0.018549	-1.0115E-05	545.3348049893086	90.363	1.1012	90.409	89.963	91.064	0.04644					35	26	2	0	0	0	0.20789	1	9455	9455		44.117	24.12	1	141960			26923	10890	18161	18171	30639	30639					0.11859765925169086
LFVVSLLLL	9	Unmodified	_LFVVSLLLL_					0	0	0			REV__ENSG00000170006|ENST00000304385|TMEM154	REV__ENSG00000170006|ENST00000304385|TMEM154	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8126525878906	2	508.841354	1015.66815	-0.62874	-0.00031993	2.2452	0.0011424	1.6164	0.00082251	508.84287206059605	43.663	0.39849	44.113	44.003	44.401	0.45025					13	9	2	0	0	0	0.20789	1	3961	3961		21.702	0	1	360190	+		26924	21625	18162	18172	30640	30640					0.16094739561663118
LFVYLFIFV	9	Unmodified	_LFVYLFIFV_					0	0	0		nc|ENSG00000259334|Q86U02|LINC00596	nc|ENSG00000259334|Q86U02|LINC00596	nc|ENSG00000259334|Q86U02|LINC00596	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.8406982421875	2	580.841354	1159.66815	-0.43283	-0.00025141	-0.96751	-0.00056197	-1.4003	-0.00081338	580.8405993802119	69.859	0.92783	69.822	69.57	70.498	-0.036957					124	48	3	0	0	0	0.78292	1	6785	6785		29.842	3.0454	1	18374000			26925	15301	18163	18173	30641	30641					0.09470739561629671
LFWKKKKSSTT	11	Unmodified	_LFWKKKKSSTT_					0	0	0		nc|ENSG00000151332|Q9NS73-3|MBIP	nc|ENSG00000151332|Q9NS73-3|MBIP	nc|ENSG00000151332|Q9NS73-3|MBIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9324035644531	3	451.934484	1352.78162	-1.2099	-0.00054677	-2.7663	-0.0012502	-3.9762	-0.001797	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.73277	1	10547	10547		25.892	2.5138	1	1176100			26926	14990	18164	18174	30642	30642					0.11934182936715843
LFWVLDAHAI	10	Unmodified	_LFWVLDAHAI_					0	0	0		nc|ENSG00000161395|Q96FM1-2|PGAP3;nc|ENSG00000161395|Q96FM1-3|PGAP3;ENSG00000161395|ENST00000300658|PGAP3;ENST00000309862.10_1_17:37829058-37830070:-|nuORF	nc|ENSG00000161395|Q96FM1-2|PGAP3	nc|ENSG00000161395|Q96FM1-2|PGAP3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	592.3181762695312	2	592.826766	1183.63898	-0.67988	-0.00040305	-0.60487	-0.00035858	-1.2847	-0.00076163	593.3289265566573	59.859	0.22588	60.412	60.355	60.581	0.55323					7	5	2	0	0	0	0.37624	1	6359	6359		37.159	22.294	1	166800			26927	5635	18165	18175	30643	30643					0.05450595265369884
LFYLSYTP	8	Unmodified	_LFYLSYTP_					0	0	0			REV__ENSG00000171811|ENST00000368586|CFAP46	REV__ENSG00000171811|ENST00000368586|CFAP46	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.25714111328125	2	502.260394	1002.50623	0.067878	3.4092E-05	-4.1137	-0.0020661	-4.0458	-0.002032	502.25823575679027	54.48	0.62914	54.887	54.573	55.202	0.40663					43	14	4	0	0	0	0.93529	1	5538	5538		52.299	2.8576	1	979030	+		26928	21770	18166	18176	30644	30644					0.005081508087073416
LGAAALLLP	9	Unmodified	_LGAAALLLP_					0	0	0			REV__nc|ENSG00000054179|Q9Y5L3-3|ENTPD2	REV__nc|ENSG00000054179|Q9Y5L3-3|ENTPD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7750549316406	2	419.773471	837.53239	2.2196	0.00093172	1.7406	0.00073065	3.9602	0.0016624	419.7741067165764	52.137	1.9692	52.15	50.995	52.964	0.01244					76	47	2	0	0	0	0.78292	1	4534	4534		29.842	6.8048	1	186930	+		26929	16396	18167	18177	30645	30645					0.10712464770847419
LGAAFSLQ	8	Unmodified	_LGAAFSLQ_					0	0	0			REV__ENSG00000204843|ENST00000628224|DCTN1	REV__ENSG00000204843|ENST00000628224|DCTN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.7237548828125	2	403.723978	805.433404	-1.8572	-0.00074981	2.1457	0.00086627	0.28846	0.00011646	403.7247227583041	64.772	1.8283	64.897	63.712	65.54	0.12545					133	73	3	0	0	0	0.92457	1	5701	5701		47.916	0	1	1035700	+		26930	23522	18168	18178	30646	30646					0.022904418059511045
LGAAFSLQ	8	Unmodified	_LGAAFSLQ_					0	0	0			REV__ENSG00000204843|ENST00000628224|DCTN1	REV__ENSG00000204843|ENST00000628224|DCTN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.7240295410156	2	403.723978	805.433404	0.40958	0.00016536	-0.076812	-3.1011E-05	0.33277	0.00013435	403.72380872064997	64.881	1.7093	65.005	63.854	65.563	0.12396					144	69	3	0	0	0	0.88944	1	5724	5724		57.811	0	1	1091100	+		26931	23522	18168	18178	30647	30647					0.022904418059511045
LGAAGAGS	8	Unmodified	_LGAAGAGS_					0	0	0			REV__ENSG00000167967|ENST00000301727|E4F1	REV__ENSG00000167967|ENST00000301727|E4F1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	603.31298828125	1	603.309666	602.30239	0.93345	0.00056316	3.8177	0.0023033	4.7512	0.0028664	603.311719561833	47.446	1.0089	47.465	47.063	48.072	0.018967					43	31	2	0	0	0	0.85228	1	3561	3561		10.185	0	1	305660	+		26932	21439	18169	18179	30648	30648					-0.01466948842085003
LGAAGAGS	8	Unmodified	_LGAAGAGS_					0	0	0			REV__ENSG00000167967|ENST00000301727|E4F1	REV__ENSG00000167967|ENST00000301727|E4F1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		1	603.309666	602.30239	-0.98557	-0.0005946	6.2111	0.0037472	5.2255	0.0031526	603.3132369302707	47.378	1.5306	47.378	46.92	48.45	0	-0.087922	0.00043931	NaN	10.185	78	53	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	408600	+		26933	21439	18169	18179							-0.01466948842085003
LGAAGAGS	8	Unmodified	_LGAAGAGS_					0	0	0			REV__ENSG00000167967|ENST00000301727|E4F1	REV__ENSG00000167967|ENST00000301727|E4F1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		1	603.309666	602.30239	-0.27994	-0.00016889	5.4304	0.0032762	5.1505	0.0031073	603.3127703755772	47.651	1.1737	47.641	47.036	48.21	-0.0093231	0.17571	-3.1649E-05	NaN	10.185	55	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	320870	+		26934	21439	18169	18179							-0.01466948842085003
LGAAGAGS	8	Unmodified	_LGAAGAGS_					0	0	0			REV__ENSG00000167967|ENST00000301727|E4F1	REV__ENSG00000167967|ENST00000301727|E4F1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		1	603.309666	602.30239	-0.33536	-0.00020233	5.0362	0.0030384	4.7008	0.0028361	603.3125856784476	47.481	1.0675	47.454	47.07	48.138	-0.026737	-0.011483	-0.00026951	NaN	10.185	46	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	344590	+		26935	21439	18169	18179							-0.01466948842085003
LGAAGAGS	8	Unmodified	_LGAAGAGS_					0	0	0			REV__ENSG00000167967|ENST00000301727|E4F1	REV__ENSG00000167967|ENST00000301727|E4F1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		1	603.309666	602.30239	-0.98167	-0.00059225	6.1024	0.0036817	5.1208	0.0030894	603.3132945903166	47.497	1.3506	47.495	47.093	48.443	-0.002449	0.029029	0.00037378	NaN	10.185	52	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299650	+		26936	21439	18169	18179							-0.01466948842085003
LGAAGAGS	8	Unmodified	_LGAAGAGS_					0	0	0			REV__ENSG00000167967|ENST00000301727|E4F1	REV__ENSG00000167967|ENST00000301727|E4F1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		1	603.309666	602.30239	0.93345	0.00056316	3.8177	0.0023033	4.7512	0.0028664	603.311719561833	47.446	1.0089	47.465	47.063	48.072	0.018967	-0.00082178	-0.0010046	NaN	10.185	43	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	305660	+		26937	21439	18169	18179							-0.01466948842085003
LGAAGAGS	8	Unmodified	_LGAAGAGS_					0	0	0			REV__ENSG00000167967|ENST00000301727|E4F1	REV__ENSG00000167967|ENST00000301727|E4F1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		1	603.309666	602.30239	0.15995	9.6498E-05	4.7879	0.0028886	4.9479	0.0029851	603.3124260904028	47.449	1.2485	47.361	46.966	48.215	-0.087646	-0.10452	-0.00041928	NaN	10.185	57	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	347620	+		26938	21439	18169	18179							-0.01466948842085003
LGAAVPLLA	9	Unmodified	_LGAAVPLLA_					0	0	0			REV__ENST00000377113.5_1_10:21784500-21784692:-|nuORF	REV__ENST00000377113.5_1_10:21784500-21784692:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7673034667969	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.78292	1	2875	2875		29.842	4.3914	1	669780	+		26939	25856	18170	18180	30649	30649					0.0979217825380374
LGADDVPNPA	10	Unmodified	_LGADDVPNPA_					0	0	0			REV__nc|ENSG00000140798|Q96J65|ABCC12	REV__nc|ENSG00000140798|Q96J65|ABCC12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.73779296875	2	484.737814	967.461075	-0.27861	-0.00013505	-0.69684	-0.00033778	-0.97545	-0.00047284	484.7375351829359	80.308	1.0867	80.834	80.359	81.446	0.52676					49	25	3	0	0	0	0.85934	1	9266	9266		35.618	0.41757	1	399260	+		26940	19641	18171	18181	30650	30650					-0.023956997244795275
LGADDVPNPA	10	Unmodified	_LGADDVPNPA_					0	0	0			REV__nc|ENSG00000140798|Q96J65|ABCC12	REV__nc|ENSG00000140798|Q96J65|ABCC12	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	484.737814	967.461075	-0.098392	-4.7694E-05	-3.7431	-0.0018144	-3.8414	-0.0018621	484.7360154148434	80.446	0.58928	80.868	80.637	81.227	0.4215	0.016755	-0.00047661	NaN	35.618	33	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	504100	+		26941	19641	18171	18181							-0.023956997244795275
LGADDVPNPA	10	Unmodified	_LGADDVPNPA_					0	0	0			REV__nc|ENSG00000140798|Q96J65|ABCC12	REV__nc|ENSG00000140798|Q96J65|ABCC12	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	484.737814	967.461075	-0.27861	-0.00013505	-0.69684	-0.00033778	-0.97545	-0.00047284	484.7375351829359	80.308	1.0867	80.834	80.359	81.446	0.52676	-0.016755	0.0024766	NaN	35.618	49	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	399260	+		26942	19641	18171	18181							-0.023956997244795275
LGAHGVVF	8	Unmodified	_LGAHGVVF_					0	0	0			REV__ENSG00000146828|ENST00000354161|SLC12A9	REV__ENSG00000146828|ENST00000354161|SLC12A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.22845458984375	2	400.226688	798.438824	1.9396	0.0007763	0.82933	0.00033192	2.769	0.0011082	400.22746720749507	55.46	1.1518	55.491	54.998	56.15	0.030838					66	28	3	0	0	0	0.84567	2	4951	4951;5005		24.504	7.799	1	652610	+		26943	20034	18172	18182	30651;30652	30651					0.0315416538842328
LGAHTWDQVLQ	11	Unmodified	_LGAHTWDQVLQ_					0	0	0		ENST00000256996.8_1_11:47260415-47260484:+|nuORF	ENST00000256996.8_1_11:47260415-47260484:+|nuORF	ENST00000256996.8_1_11:47260415-47260484:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.326416015625	2	634.325119	1266.63569	-0.8757	-0.00055548	1.0529	0.0006679	0.17723	0.00011242	634.3257216778103	57.323	1.5327	57.717	57.284	58.816	0.39407					110	37	5	0	0	0	0.33509	1	5931	5931		65.465	1.9315	1	4993700			26944	9345	18173	18183	30653	30653					0.013033004207045451
LGAICPKH	8	Unmodified	_LGAICPKH_					0	0	0		ENSG00000274286|ENST00000620793|ADRA2B	ENSG00000274286|ENST00000620793|ADRA2B	ENSG00000274286|ENST00000620793|ADRA2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.19677734375	2	419.733823	837.453093	0.74267	0.00031172	2.4722	0.0010377	3.2149	0.0013494	419.73533370459097	87.089	0.49837	87.535	87.142	87.641	0.44628					18	11	2	0	0	0	0.4196	1	10175	10175		21.702	17.021	1	71760			26945	8994	18174	18184	30654	30654					0.02786494545057394
LGAILMYPD	9	Unmodified	_LGAILMYPD_					0	0	0		ENST00000469132.1_1_6:32947934-32948492:+|nuORF	ENST00000469132.1_1_6:32947934-32948492:+|nuORF	ENST00000469132.1_1_6:32947934-32948492:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.7621154785156	2	496.759704	991.504854	-1.058	-0.00052556	3.3173	0.0016479	2.2593	0.0011223	496.76126072971397	44.137	0.61014	44.587	44.322	44.932	0.45025					30	14	3	0	0	0	0.49378	1	4048	4048		52.299	6.3472	1	874010			26946	12190	18175	18185	30655	30655					0.008761934482890865
LGALKGRFV	9	Unmodified	_LGALKGRFV_					0	0	0			REV__ENST00000298251.4_1_11:124805926-124806082:-|nuORF	REV__ENST00000298251.4_1_11:124805926-124806082:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.80096435546875	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.77546	1	9856	9856		31.955	5.1588	1	17379000	+		26947	24730	18176	18186	30656	30656					0.11022360785045748
LGALPKGR	8	Unmodified	_LGALPKGR_					0	0	0			REV__ENST00000358901.10_1_9:35068350-35072606:-|nuORF	REV__ENST00000358901.10_1_9:35068350-35072606:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2481689453125	2	406.261062	810.507572	1.1317	0.00045976	-3.612	-0.0014674	-2.4803	-0.0010076	406.25974042824697	88.414	0.8509	88.34	87.942	88.793	-0.074005					39	20	3	0	0	0	0.4196	1	9143	9143		12.959	0	1	348520	+		26948	25446	18177	18187	30657	30657					0.09473829688135993
LGAPRERLLLQ	11	Unmodified	_LGAPRERLLLQ_					0	0	0			REV__ENSG00000163633|ENST00000295898|C4orf36	REV__ENSG00000163633|ENST00000295898|C4orf36	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2277526855469	3	422.594461	1264.76155	-1.014	-0.00042852	-3.4736	-0.0014679	-4.4876	-0.0018964	422.59294286599487	63.705	0.66824	63.736	63.409	64.077	0.030243					37	28	2	0	0	0	0.17305	1	5608	5608		30.569	15.875	1	55705	+		26949	20949	18178	18188	30658	30658					0.13976431996798055
LGARLAECL	9	Unmodified	_LGARLAECL_					0	0	0		ENSG00000215912|ENST00000401095|TTC34	ENSG00000215912|ENST00000401095|TTC34	ENSG00000215912|ENST00000401095|TTC34	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2538146972656	2	473.262945	944.511337	-0.51984	-0.00024602	-1.137	-0.00053811	-1.6569	-0.00078413	473.2613419775648	22.575	0.33107	21.964	21.745	22.076	-0.6107					17	7	3	0	0	0	0.20789	1	935	935		17.365	10.172	1	68967			26950	8657	18179	18189	30659	30659					0.03686131399661008
LGARLSGALHV	11	Unmodified	_LGARLSGALHV_					0	0	0		ENSG00000112293|ENST00000230036|GPLD1	ENSG00000112293|ENST00000230036|GPLD1	ENSG00000112293|ENST00000230036|GPLD1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3336181640625	2	547.327465	1092.64038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.76	1	113.76	113.26	114.26	0.0011978								0	0	0	0.56276	1	13729	13729		25.574	3.6142	1				26951	2651	18180	18190	30660	30660					0.0977622935411091
LGARVALH	8	Unmodified	_LGARVALH_					0	0	0		nc|ENSG00000164050|O43157-2|PLXNB1;ENSG00000164050|ENST00000296440|PLXNB1;ENST00000485535.5_1_3:48445895-48454598:-|nuORF	nc|ENSG00000164050|O43157-2|PLXNB1	nc|ENSG00000164050|O43157-2|PLXNB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.758056640625	2	418.758687	835.502821	-0.16509	-6.9132E-05	0.52959	0.00022177	0.36451	0.00015264	418.758922983534	35.057	0.53166	35.045	34.849	35.381	-0.012199					21	13	2	0	0	0	0.86288	1	2151	2151		26.796	5.0938	1	34354			26952	5906	18181	18191	30661	30661					0.078489455453564
LGARVALH	8	Unmodified	_LGARVALH_					0	0	0		nc|ENSG00000164050|O43157-2|PLXNB1;ENSG00000164050|ENST00000296440|PLXNB1;ENST00000485535.5_1_3:48445895-48454598:-|nuORF	nc|ENSG00000164050|O43157-2|PLXNB1	nc|ENSG00000164050|O43157-2|PLXNB1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	418.758687	835.502821	-1.9563	-0.00081923	2.3903	0.001001	0.43396	0.00018173	418.75929739894667	34.93	0.34698	34.93	34.692	35.039	0	-0.13932	0.001941	NaN	26.796	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14532			26953	5906	18181	18191							0.078489455453564
LGARVALH	8	Unmodified	_LGARVALH_					0	0	0		nc|ENSG00000164050|O43157-2|PLXNB1;ENSG00000164050|ENST00000296440|PLXNB1;ENST00000485535.5_1_3:48445895-48454598:-|nuORF	nc|ENSG00000164050|O43157-2|PLXNB1	nc|ENSG00000164050|O43157-2|PLXNB1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	418.758687	835.502821	-0.7194	-0.00030126	0.60185	0.00025203	-0.11756	-4.9228E-05	418.7588937517797	35.177	0.65773	35.121	34.81	35.468	-0.056385	0.051582	0.0004431	NaN	26.796	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49450			26954	5906	18181	18191							0.078489455453564
LGARVALH	8	Unmodified	_LGARVALH_					0	0	0		nc|ENSG00000164050|O43157-2|PLXNB1;ENSG00000164050|ENST00000296440|PLXNB1;ENST00000485535.5_1_3:48445895-48454598:-|nuORF	nc|ENSG00000164050|O43157-2|PLXNB1	nc|ENSG00000164050|O43157-2|PLXNB1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	418.758687	835.502821	1.4999	0.0006281	-1.5937	-0.00066738	-0.093797	-3.9278E-05	418.7579563577079	35.174	0.65687	35.18	34.862	35.519	0.0063934	0.11139	-0.0013957	NaN	26.796	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39400			26955	5906	18181	18191							0.078489455453564
LGAVIGVIP	9	Unmodified	_LGAVIGVIP_					0	0	0			REV__nc|ENSG00000206341|P01893|HLA-H;REV__ENSG00000204642|ENST00000259951|HLA-F	REV__ENSG00000204642|ENST00000259951|HLA-F	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7749328613281	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.7932	1	3680	3680		21.702	1.2205	1	184570000	+		26956	23513;23780	18182	18192	30662	30662					0.10712464770847419
LGCIPPNPFE	10	Unmodified	_LGCIPPNPFE_					0	0	0		ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5	ENSG00000104517|ENST00000520539|UBR5	ENSG00000104517|ENST00000520539|UBR5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.7032470703125	2	543.76806	1085.52157	-0.039504	-2.1481E-05	2.8269	0.0015372	2.7874	0.0015157	543.7693624760634	31.703	0.32267	31.721	31.539	31.862	0.01836					9	6	2	0	0	0	0.37624	1	1714	1714		44.377	6.5657	1	23038			26957	2136	18183	18193	30663	30663					-0.017773056657460984
LGCPGLRGR	9	Unmodified	_LGCPGLRGR_					0	0	0		ENST00000428708.6_1_17:79089831-79089936:+|nuORF	ENST00000428708.6_1_17:79089831-79089936:+|nuORF	ENST00000428708.6_1_17:79089831-79089936:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.760009765625	2	464.760904	927.507254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.263	1	78.827	78.327	79.327	0.56332								0	0	0	0.28386	1	8964	8964		37.159	9.0776	1				26958	11595	18184	18194	30664	30664					0.04060086696631515
LGCSSKLV	8	Unmodified	_LGCSSKLV_					0	0	0			REV__chr17:61780401-61780840|55|22.42|0.84|4.74|-|2|BRIP1,BRIP1|1	REV__chr17:61780401-61780840|55|22.42|0.84|4.74|-|2|BRIP1,BRIP1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.7239074707031	2	403.725664	805.436775	-1.1089	-0.00044771	-2.6228	-0.0010589	-3.7318	-0.0015066	403.7244510631445	64.933	1.6766	64.971	63.905	65.582	0.037849					135	64	4	0	0	0	0.92457	1	5692	5692		47.916	0	1	1390300	+		26959	15662	18185	18195	30665	30665					0.026273685882983955
LGDECCGQPGN	11	Unmodified	_LGDECCGQPGN_					0	0	0			REV__ENST00000375353.4_1_13:114519114-114519489:+|nuORF	REV__ENST00000375353.4_1_13:114519114-114519489:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8401489257812	2	546.707873	1091.40119	3.3609	0.0018375	1.6526	0.00090352	5.0136	0.002741	547.2100859820251	100.91	0.32416	100.85	100.75	101.08	-0.052116					9	7	2	0	0	0	0.17484	1	10954	10954		46.457	5.8842	1	31032	+		26960	25811	18186	18196	30666	30666					-0.1408508172164602
LGDFIEHY	8	Unmodified	_LGDFIEHY_					0	0	0		ENSG00000146676|ENST00000395699|PURB;nc|ENSG00000172733|Q9UJV8-2|PURG;ENSG00000185129|ENST00000331327|PURA;chr8:30996697-31031919|55|16.51|0.8|4.36|-|ENST00000339382|PURG,PURG;ENSG00000172733|ENST00000523392|PURG	ENSG00000146676|ENST00000395699|PURB	ENSG00000146676|ENST00000395699|PURB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.2344665527344	2	497.23745	992.460347	-0.66755	-0.00033193	-3.2968	-0.0016393	-3.9643	-0.0019712	497.2356873508865	30.476	0.61685	30.539	30.265	30.882	0.063122					59	31	3	0	0	0	0.9159	1	1334	1334		44.531	3.7529	1	167320			26961	514	18187	18197	30667	30667					-0.03618494373529302
LGDGIFSHI	9	Unmodified	_LGDGIFSHI_					0	0	0			REV__ENSG00000198793|ENST00000361445|MTOR	REV__ENSG00000198793|ENST00000361445|MTOR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.7513732910156	2	479.753267	957.491981	-1.1794	-0.00056582	-3.1558	-0.001514	-4.3352	-0.0020798	479.7516678352157	31.194	0.81332	31.184	30.842	31.655	-0.010656					35	18	3	0	0	0	0.62081	1	1701	1701		45.952	11.779	1	189750	+		26962	23382	18188	18198	30668	30668					0.01153498380426754
LGDIPVFI	8	Unmodified	_LGDIPVFI_					0	0	0		nc|ENSG00000132849|Q8NI35|PATJ;ENSG00000132849|ENST00000642238|PATJ;ENST00000472512.2_1_1:62586792-62593784:+|nuORF;ENST00000484937.5_1_1:62582831-62626723:+|nuORF	nc|ENSG00000132849|Q8NI35|PATJ	nc|ENSG00000132849|Q8NI35|PATJ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7676696777344	2	437.257654	872.500755	-1.4835	-0.00064866	-3.688	-0.0016126	-5.1715	-0.0022613	437.25579102749555	42.146	1.3964	42.843	42.236	43.632	0.69754					39	34	2	0	0	0	0.4196	1	3759	3759		42.474	0	1	235900			26963	3834	18189	18199	30669	30669					0.05940472016891363
LGDKSEYLE	9	Unmodified	_LGDKSEYLE_					0	0	0		ENSG00000182255|ENST00000328224|KCNA4	ENSG00000182255|ENST00000328224|KCNA4	ENSG00000182255|ENST00000328224|KCNA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.2569580078125	2	527.258579	1052.50261	0.86662	0.00045693	-3.5753	-0.0018851	-2.7086	-0.0014282	527.256566104279	25.63	0.81838	25.598	25.164	25.983	-0.032125					65	25	4	0	0	0	0.55097	1	1048	1048		49.442	1.482	1	358050			26964	7440	18190	18200	30670	30670					-0.021545637557892405
LGDMDLRGKY	10	Unmodified	_LGDMDLRGKY_					0	0	0			REV__ENSG00000136002|ENST00000409359|ARHGEF4	REV__ENSG00000136002|ENST00000409359|ARHGEF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.2970581054688	2	584.294973	1166.57539	-0.34411	-0.00020106	3.2654	0.0019079	2.9213	0.0017069	584.2988622760629	76.093	0.68468	76.662	76.392	77.077	0.56836					56	17	5	0	0	0	0.33399	1	8670	8670		69.628	18.435	1	747270	+		26965	19279	18191	18201	30671	30671					-0.0012313323402395326
LGDQHGNH	8	Unmodified	_LGDQHGNH_					0	0	0		ENST00000373699.5_1_6:36839594-36842525:-|nuORF	ENST00000373699.5_1_6:36839594-36842525:-|nuORF	ENST00000373699.5_1_6:36839594-36842525:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2001953125	2	439.19919	876.383828	2.7664	0.001215	-2.7509	-0.0012082	0.015504	6.8092E-06	439.1979044520637	101.42	0.60172	101.74	101.6	102.2	0.32511					24	15	2	0	0	0	0.87064	1	12341	12341		29.15	2.1022	1	686280			26966	10754	18192	18202	30672	30672					-0.05930873150145999
LGDRRQPV	8	Unmodified	_LGDRRQPV_					0	0	0		ENSG00000164010|ENST00000372517|ERMAP	ENSG00000164010|ENST00000372517|ERMAP	ENSG00000164010|ENST00000372517|ERMAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.76910400390625	2	470.769783	939.525013	-0.039118	-1.8416E-05	-1.6086	-0.0007573	-1.6478	-0.00077572	470.76888428229023	53.107	1.8265	53.104	52.614	54.44	-0.0033035					119	53	3	0	0	0	0.87479	1	4595	4595		30.504	0	1	1606400			26967	5899	18193	18203	30673	30673					0.052831252231385406
LGDRVQLLNLL	11	Unmodified	_LGDRVQLLNLL_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3851928710938	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.73893	1	13172	13172		24.519	0.99649	1	19815000			26968	7058	18194	18204	30674	30674					0.13405609902679316
LGDTRRTYSRW	11	Unmodified	_LGDTRRTYSRW_					0	0	0			REV__ENSG00000175906|ENST00000320033|ARL4D	REV__ENSG00000175906|ENST00000320033|ARL4D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.9116516113281	3	470.912742	1409.7164	0.27725	0.00013056	-1.2796	-0.00060257	-1.0023	-0.00047201	470.91181584398765	45.581	0.436	45.624	45.523	45.959	0.042599					15	11	2	0	0	0	0.75457	1	3321	3321		21.032	0.19508	1	125710	+		26969	22091	18195	18205	30675	30675					0.0279258146358643
LGDVKLTP	8	Unmodified	_LGDVKLTP_					0	0	0		nc|ENSG00000117713|O14497-2|ARID1A;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A	nc|ENSG00000117713|O14497-2|ARID1A	nc|ENSG00000117713|O14497-2|ARID1A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.7522277832031	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.874	1	76.963	76.463	77.463	0.089363								0	0	0	0.30609	1	7178	7178		44.531	0	1				26970	2998	18196	18206	30676	30676					0.06383284011508294
LGEALAPLL	9	Unmodified	_LGEALAPLL_					0	0	0			REV__ENST00000245414.8_1_5:131819023-131819143:-|nuORF	REV__ENST00000245414.8_1_5:131819023-131819143:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.7768249511719	2	448.776211	895.537869	0.48906	0.00021948	2.689	0.0012068	3.1781	0.0014262	448.77727459064977	71.648	0.93057	71.778	71.32	72.25	0.1301					72	37	2	0	0	0	0.78851	1	6528	6528		28.254	1.4582	1	133700	+		26971	24252	18197	18207	30677	30677					0.08592143562668753
LGEGSYGSVY	10	Unmodified	_LGEGSYGSVY_					0	0	0		nc|ENSG00000101109|Q13043-2|STK4;ENSG00000101109|ENST00000372806|STK4	nc|ENSG00000101109|Q13043-2|STK4	nc|ENSG00000101109|Q13043-2|STK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.241943359375	2	516.237647	1030.46074	0.26137	0.00013493	1.2396	0.00063994	1.501	0.00077487	516.2382304324987	40.225	0.51815	40.194	39.889	40.407	-0.030991					17	12	2	0	0	0	0.71042	1	2850	2850		44.117	3.5442	1	82585			26972	1898	18198	18208	30678	30678					-0.053271194443368586
LGEKAAAKR	9	Unmodified	_LGEKAAAKR_					0	0	0		ENSG00000171853|ENST00000324266|TRAPPC12	ENSG00000171853|ENST00000324266|TRAPPC12	ENSG00000171853|ENST00000324266|TRAPPC12	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28851318359375	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.57	1	119.55	119.05	120.05	-0.024033								0	0	0	0.32758	1	13247	13247		20.947	2.6225	1				26973	6719	18199	18209	30679	30679					0.08748582399982752
LGELKDKPIPR	11	Unmodified	_LGELKDKPIPR_					0	0	0			REV__ENST00000519994.5_1_14:91633683-91655281:+|nuORF	REV__ENST00000519994.5_1_14:91633683-91655281:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.59295654296875	3	422.590717	1264.75032	1.8674	0.00078915	3.7839	0.001599	5.6513	0.0023882	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.72892	1	4881	4881		26.75	5.9126	1	997830	+		26974	19103	18200	18210	30680	30680					0.1285360990261779
LGEMWSKKH	9	Unmodified	_LGEMWSKKH_					0	0	0			REV__ENST00000477232.5_1_2:162241962-162267908:+|nuORF	REV__ENST00000477232.5_1_2:162241962-162267908:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	558.2855224609375	2	558.286951	1114.55935	-0.97789	-0.00054595	-3.1837	-0.0017774	-4.1616	-0.0023234	558.2847818887834	75.353	0.69984	75.44	75.146	75.846	0.087631					35	17	3	0	0	0	0.78058	1	7006	7006		30.504	0.18592	1	171770	+		26975	18097	18201	18211	30681	30681					0.006652053197285568
LGEPARAR	8	Unmodified	_LGEPARAR_					0	0	0			REV__ENST00000378078.4_1_9:35756983-35757355:+|nuORF	REV__ENST00000378078.4_1_9:35756983-35757355:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2514953613281	2	435.251226	868.487899	0.060967	2.6536E-05	2.665	0.0011599	2.7259	0.0011865	435.2512504176026	77.105	2.0148	77.505	76.162	78.177	0.3997					95	54	4	0	0	0	0.87922	1	8752	8752		31.955	0	1	572660	+		26976	25887	18202	18212	30682	30682					0.048394536773685104
LGEPIEEF	8	Unmodified	_LGEPIEEF_					0	0	0		nc|ENSG00000048707|Q5THJ4-2|VPS13D;ENSG00000048707|ENST00000620676|VPS13D;ENST00000487188.1_1_1:12371595-12395946:+|nuORF;ENST00000460333.5_1_1:12359354-12409038:+|nuORF	nc|ENSG00000048707|Q5THJ4-2|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2335205078125	2	467.231833	932.449113	-1.043	-0.00048731	4.4061	0.0020587	3.3631	0.0015713	467.23370254393717	68.31	1.3377	68.343	68.023	69.361	0.033005					128	53	3	0	0	0	0.91005	1	6544	6544		42.474	0	1	1288900			26977	977	18203	18213	30683	30683					-0.019813164676634187
LGEPIEEF	8	Unmodified	_LGEPIEEF_					0	0	0		nc|ENSG00000048707|Q5THJ4-2|VPS13D;ENSG00000048707|ENST00000620676|VPS13D;ENST00000487188.1_1_1:12371595-12395946:+|nuORF;ENST00000460333.5_1_1:12359354-12409038:+|nuORF	nc|ENSG00000048707|Q5THJ4-2|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.2333068847656	2	467.231833	932.449113	0.48872	0.00022835	2.8859	0.0013484	3.3746	0.0015767	467.2330448389886	69.415	1.8077	69.544	68.979	70.786	0.1291					180	87	3	0	0	0	0.93529	1	6257	6257		52.299	0	1	9201900			26978	977	18203	18213	30684	30684					-0.019813164676634187
LGETEPLKLE	10	Unmodified	_LGETEPLKLE_					0	0	0		nc|ENSG00000185437|P55822|SH3BGR	nc|ENSG00000185437|P55822|SH3BGR	nc|ENSG00000185437|P55822|SH3BGR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	564.8102416992188	2	564.810979	1127.6074	-1.2607	-0.00071205	0.48484	0.00027384	-0.77586	-0.00043821	564.8111502403638	109.93	1.6377	109.87	109.63	111.26	-0.055077					173	65	5	0	0	0	0.82886	1	11975	11975		37.812	2.6595	1	6827300			26979	15151	18204	18214	30685	30685					0.04870557720778379
LGETLDPE	8	Unmodified	_LGETLDPE_					0	0	0		chr4:118278792-118278966|59|25.53|0.86|4.88|+|2|SNHG8,SNHG8|1	chr4:118278792-118278966|59|25.53|0.86|4.88|+|2|SNHG8,SNHG8|1	chr4:118278792-118278966|59|25.53|0.86|4.88|+|2|SNHG8,SNHG8|1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.23699951171875	2	437.21364	872.412728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.04	1	64.16	63.66	64.66	0.12004								0	0	0	0.29694	1	5625	5625		37.028	5.0736	1				26980	416	18205	18215	30686	30686					-0.028581933643863522
LGFFKTNFF	9	Unmodified	_LGFFKTNFF_					0	0	0			REV__nc|ENSG00000147130|Q14202-2|ZMYM3	REV__nc|ENSG00000147130|Q14202-2|ZMYM3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.7953491210938	2	560.794935	1119.57532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.53	1	117.61	117.11	118.11	0.087753								0	0	0	0.3465	1	12437	12437		15.642	1.8665	1		+		26981	20053	18206	18216	30687	30687					0.0203123482826868
LGFGRMER	8	Unmodified	_LGFGRMER_					0	0	0		ENST00000366955.7_1_1:214776590-214787168:+|nuORF	ENST00000366955.7_1_1:214776590-214787168:+|nuORF	ENST00000366955.7_1_1:214776590-214787168:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.2377624511719	2	483.252911	964.49127	0.2359	0.000114	-1.7497	-0.00084556	-1.5138	-0.00073156	483.2519863482841	39.789	0.31504	39.878	39.611	39.926	0.088375					11	7	2	0	0	0	0.4196	1	2475	2475		31.955	6.5047	1	41554			26982	10522	18207	18217	30688	30688					0.007603804597238195
LGFIHSLF	8	Unmodified	_LGFIHSLF_					0	0	0			REV__ENST00000309993.2_1_3:135913869-135914463:-|nuORF	REV__ENST00000309993.2_1_3:135913869-135914463:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.584228515625	2	467.263271	932.511988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.919	1	70.919	70.419	71.419	0								0	0	0	0.29694	1	6318	6318		37.028	2.8559	1		+		26983	24877	18208	18218	30689	30689					0.04303294111048217
LGFQKSGILL	10	Unmodified	_LGFQKSGILL_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326416015625	2	538.329142	1074.64373	-1.4901	-0.00080219	-1.8385	-0.0009897	-3.3286	-0.0017919	538.3280408063748	105.57	1.6992	105.64	104.97	106.67	0.07312					102	41	4	0	0	0	0.37624	1	11106	11106		21.96	5.4867	1	1120100	+		26984	23147	18209	18219	30690	30690					0.10939479408148145
LGFQKSGILL	10	Unmodified	_LGFQKSGILL_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	538.329142	1074.64373	-0.15457	-8.3211E-05	-3.286	-0.001769	-3.4406	-0.0018522	538.3272743681667	105.93	1.9444	105.91	105.06	107	-0.025146	0.11147	0.00074877	NaN	21.96	87	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	893020	+		26985	23147	18209	18219							0.10939479408148145
LGFQKSGILL	10	Unmodified	_LGFQKSGILL_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	538.329142	1074.64373	3.5642	0.0019187	-7.0069	-0.003772	-3.4427	-0.0018533	538.3252348581391	105.87	1.733	105.83	105.15	106.88	-0.03714	0.034353	-0.0032573	NaN	21.96	104	40	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	920080	+		26986	23147	18209	18219							0.10939479408148145
LGFQKSGILL	10	Unmodified	_LGFQKSGILL_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	538.329142	1074.64373	0.84022	0.00045231	-4.3186	-0.0023248	-3.4784	-0.0018725	538.3267092766064	105.64	1.5931	105.75	105.07	106.66	0.10766	-0.048618	-0.00036298	NaN	21.96	119	39	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1538800	+		26987	23147	18209	18219							0.10939479408148145
LGFVHGGI	8	Unmodified	_LGFVHGGI_					0	0	0		nc|ENSG00000260811|A6NMZ5|OR4C45	nc|ENSG00000260811|A6NMZ5|OR4C45	nc|ENSG00000260811|A6NMZ5|OR4C45	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.2281799316406	2	400.226688	798.438824	0.31926	0.00012778	4.1334	0.0016543	4.4527	0.0017821	400.2284187459368	54.769	2.6558	54.861	53.242	55.898	0.091167					119	74	2	0	0	0	0.84567	1	4526	4526		24.504	0	1	1143300			26988	15302	18210	18220	30691	30691					0.0315416538842328
LGFVHGGI	8	Unmodified	_LGFVHGGI_					0	0	0		nc|ENSG00000260811|A6NMZ5|OR4C45	nc|ENSG00000260811|A6NMZ5|OR4C45	nc|ENSG00000260811|A6NMZ5|OR4C45	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2259521484375	2	400.226688	798.438824	-0.9002	-0.00036028	-1.2479	-0.00049943	-2.1481	-0.00085971	400.22605803281857	41.083	1.6559	41.475	40.867	42.523	0.39209					92	45	3	0	0	0	0.88393	1	3623	3623		33.493	2.9893	1	2260300			26989	15302	18210	18220	30692	30692					0.0315416538842328
LGFVLGWF	8	Unmodified	_LGFVLGWF_					0	0	0			REV__ENSG00000117834|ENST00000438567|SLC5A9	REV__ENSG00000117834|ENST00000438567|SLC5A9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.76165771484375	2	469.760364	937.506175	0.13992	6.5729E-05	2.1355	0.0010032	2.2754	0.0010689	469.7613068625106	35.735	1.6772	35.674	35.283	36.96	-0.060337					67	47	2	0	0	0	0.84567	1	1934	1934		24.504	0.30126	1	144740	+		26990	18283	18211	18221	30693	30693					0.03492195599369552
LGFVSGLI	8	Unmodified	_LGFVSGLI_					0	0	0		ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2302551269531	2	403.244547	804.47454	-1.8583	-0.00074936	4.0999	0.0016533	2.2416	0.0009039	403.24539694328047	64.379	0.46551	64.499	64.198	64.664	0.12004					32	15	3	0	0	0	0.4196	1	5645	5645		46.766	0	1	100920			26991	7703	18212	18222	30694	30694					0.06448202845444939
LGFVSGLI	8	Unmodified	_LGFVSGLI_					0	0	0		ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	403.244547	804.47454	-1.5237	-0.00061444	0.39913	0.00016095	-1.1246	-0.00045349	403.2450856862407	64.581	0.61882	64.581	64.292	64.911	0	0.12314	2.4439E-05	NaN	46.766	39	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57657			26992	7703	18212	18222							0.06448202845444939
LGFVSGLI	8	Unmodified	_LGFVSGLI_					0	0	0		ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	403.244547	804.47454	-0.29723	-0.00011986	0.44895	0.00018104	0.15172	6.1182E-05	403.2446097567027	64.442	0.54249	64.408	64.106	64.649	-0.034256	-0.05029	6.4623E-05	NaN	46.766	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64418			26993	7703	18212	18222							0.06448202845444939
LGFVSGLI	8	Unmodified	_LGFVSGLI_					0	0	0		ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	403.244547	804.47454	1.5942	0.00064286	-1.4062	-0.00056706	0.18797	7.5798E-05	403.24381575237743	64.262	0.64767	64.289	64.064	64.711	0.027145	-0.16927	-0.0014316	NaN	46.766	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78592			26994	7703	18212	18222							0.06448202845444939
LGFWIRGP	8	Unmodified	_LGFWIRGP_					0	0	0		ENST00000549621.5_2_12:113623505-113623625:+|nuORF	ENST00000549621.5_2_12:113623505-113623625:+|nuORF	ENST00000549621.5_2_12:113623505-113623625:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.2711181640625	2	473.268887	944.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.064	1	78.013	77.513	78.513	-0.050789								0	0	0	0.29199	1	7764	7764		29.842	0.69198	1				26995	13641	18213	18223	30695	30695					0.048741162051896936
LGGAALPGR	9	Unmodified	_LGGAALPGR_					0	0	0		ENST00000464108.5_1_9:130689570-130690941:-|nuORF;ENST00000498783.5_1_9:130688255-130691028:-|nuORF	ENST00000464108.5_1_9:130689570-130690941:-|nuORF	ENST00000464108.5_1_9:130689570-130690941:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.3955383300781	2	406.24287	810.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.621	1	23.715	23.215	24.215	0.094501								0	0	0	0.31088	1	773	773		26.796	0	1				26996	12081	18214	18224	30696	30696					0.05836952791423755
LGGAPGLQGLR	11	Unmodified	_LGGAPGLQGLR_					0	0	0			REV__ENSG00000161992|ENST00000409413|PRR35	REV__ENSG00000161992|ENST00000409413|PRR35	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8103637695312	2	519.806365	1037.59818	1.5434	0.00080229	-2.1331	-0.0011088	-0.58968	-0.00030652	520.3075350290935	98.453	0.77438	98.829	98.49	99.265	0.37678					25	18	2	0	0	0	0.17529	1	11898	11898		51.335	12.083	1	321460	+		26997	20788	18215	18225	30697	30697					0.08088253945743418
LGGAPGLQGLR	11	Unmodified	_LGGAPGLQGLR_					0	0	0			REV__ENSG00000161992|ENST00000409413|PRR35	REV__ENSG00000161992|ENST00000409413|PRR35	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	519.806365	1037.59818	0.80179	0.00041677	0.99088	0.00051507	1.7927	0.00093184	520.3094448898971	98.504	0.22556	98.661	98.499	98.724	0.15659	-0.084164	0.0016523	NaN	51.335	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20755	+		26998	20788	18215	18225							0.08088253945743418
LGGFRVAR	8	Unmodified	_LGGFRVAR_					0	0	0		ENST00000342584.3_1_5:471473-471785:-|nuORF	ENST00000342584.3_1_5:471473-471785:-|nuORF	ENST00000342584.3_1_5:471473-471785:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2633056640625	2	438.264136	874.51372	-2.4769	-0.0010856	-1.2978	-0.00056879	-3.7748	-0.0016543	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.87479	1	3697	3697		30.504	0.18592	1	246320000			26999	10263	18216	18226	30698	30698					0.07144347919643224
LGGGKTPPGR	10	Unmodified	_LGGGKTPPGR_					0	0	0		nc|ENSG00000204655|Q16653-13|MOG	nc|ENSG00000204655|Q16653-13|MOG	nc|ENSG00000204655|Q16653-13|MOG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.27203369140625	2	470.272158	938.529764	0.69739	0.00032796	-0.70102	-0.00032967	-0.0036337	-1.7088E-06	470.2717761018985	92.152	2.8924	92.309	91.308	94.201	0.15649					149	68	4	0	0	0	0.86272	1	9358	9358		24.519	0.015177	1	1938200			27000	15213	18217	18227	30699	30699					0.05804009365908769
LGGGKTPPGR	10	Unmodified	_LGGGKTPPGR_					0	0	0		nc|ENSG00000204655|Q16653-13|MOG	nc|ENSG00000204655|Q16653-13|MOG	nc|ENSG00000204655|Q16653-13|MOG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.2701721191406	2	470.272158	938.529764	1.0926	0.00051384	-1.1185	-0.00052601	-0.025882	-1.2171E-05	470.27159576530556	91.919	2.3675	92.368	91.756	94.123	0.44959					104	55	3	0	0	0	0.86587	1	10953	10953		29.17	1.2878	1	778610			27001	15213	18217	18227	30700	30700					0.05804009365908769
LGGGLLLRA	9	Unmodified	_LGGGLLLRA_					0	0	0		nc|ENSG00000284791|A0A2R8YCJ5|SMIM41	nc|ENSG00000284791|A0A2R8YCJ5|SMIM41	nc|ENSG00000284791|A0A2R8YCJ5|SMIM41	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7798156738281	2	435.281995	868.549437	-1.6184	-0.00070445	0.82275	0.00035813	-0.79563	-0.00034632	435.28230220350247	49.414	1.4973	49.44	48.927	50.425	0.025574					70	39	2	0	0	0	0.20789	1	3755	3755		18.324	0	1	402750			27002	15325	18218	18228	30701	30701					0.10990385376669565
LGGGPALTAG	10	Unmodified	_LGGGPALTAG_					0	0	0		ENST00000486327.6_1_19:47884337-47884637:+|nuORF	ENST00000486327.6_1_19:47884337-47884637:+|nuORF	ENST00000486327.6_1_19:47884337-47884637:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.2661437988281	2	407.226885	812.439217	-0.12246	-4.987E-05	1.0101	0.00041135	0.88765	0.00036148	407.22919139510697	36.243	0.49866	36.224	35.922	36.42	-0.018673					13	10	2	0	0	0	0.37624	1	2299	2299		21.96	13.729	1	15926			27003	12579	18219	18229	30702	30702					0.025495403176250875
LGGGTLPLV	9	Unmodified	_LGGGTLPLV_					0	0	0		ENST00000470356.3_1_19:3572943-3574226:+|nuORF;ENST00000488973.6_1_19:3573129-3574226:+|nuORF	ENST00000470356.3_1_19:3572943-3574226:+|nuORF	ENST00000470356.3_1_19:3572943-3574226:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.26702880859375	2	413.755278	825.496004	0.075867	3.139E-05	4.1872	0.0017325	4.2631	0.0017639	413.75684910551763	39.346	0.90429	39.316	38.985	39.889	-0.03027					33	21	2	0	0	0	0.20789	1	2763	2763		33.516	9.3128	1	75663			27004	12219	18220	18230	30703	30703					0.07627587874139863
LGGGTLPLV	9	Unmodified	_LGGGTLPLV_					0	0	0		ENST00000470356.3_1_19:3572943-3574226:+|nuORF;ENST00000488973.6_1_19:3573129-3574226:+|nuORF	ENST00000470356.3_1_19:3572943-3574226:+|nuORF	ENST00000470356.3_1_19:3572943-3574226:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.26739501953125	2	413.755278	825.496004	0.87087	0.00036033	3.3299	0.0013778	4.2008	0.0017381	413.7564944177325	39.197	0.9255	39.208	38.849	39.775	0.011173					39	21	2	0	0	0	0.20789	1	2738	2738		40.573	0	1	57271			27005	12219	18220	18230	30704	30704					0.07627587874139863
LGGGTLPLV	9	Unmodified	_LGGGTLPLV_					0	0	0		ENST00000470356.3_1_19:3572943-3574226:+|nuORF;ENST00000488973.6_1_19:3573129-3574226:+|nuORF	ENST00000470356.3_1_19:3572943-3574226:+|nuORF	ENST00000470356.3_1_19:3572943-3574226:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	413.755278	825.496004	-1.8947	-0.00078393	6.1152	0.0025302	4.2205	0.0017463	413.75768029063534	39.043	1.0286	39.043	38.642	39.67	0	-0.15011	0.00084332	NaN	33.516	46	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86091			27006	12219	18220	18230							0.07627587874139863
LGGGTLPLV	9	Unmodified	_LGGGTLPLV_					0	0	0		ENST00000470356.3_1_19:3572943-3574226:+|nuORF;ENST00000488973.6_1_19:3573129-3574226:+|nuORF	ENST00000470356.3_1_19:3572943-3574226:+|nuORF	ENST00000470356.3_1_19:3572943-3574226:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	413.755278	825.496004	-1.304	-0.00053954	5.4252	0.0022447	4.1212	0.0017052	413.7574454858918	39.176	0.96932	39.129	38.736	39.706	-0.047001	-0.063866	0.00027234	NaN	33.516	39	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72796			27007	12219	18220	18230							0.07627587874139863
LGGGTLPLV	9	Unmodified	_LGGGTLPLV_					0	0	0		ENST00000470356.3_1_19:3572943-3574226:+|nuORF;ENST00000488973.6_1_19:3573129-3574226:+|nuORF	ENST00000470356.3_1_19:3572943-3574226:+|nuORF	ENST00000470356.3_1_19:3572943-3574226:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	413.755278	825.496004	-1.9032	-0.00078745	5.5608	0.0023008	3.6576	0.0015134	413.7575072579212	39.259	0.70069	39.269	38.978	39.679	0.010708	0.076219	0.00038454	NaN	33.516	24	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49577			27008	12219	18220	18230							0.07627587874139863
LGGGVGVIKM	10	Unmodified	_LGGGVGVIKM_					0	0	0		nc|ENSG00000076321|Q9Y2M5-2|KLHL20;ENSG00000076321|ENST00000209884|KLHL20	nc|ENSG00000076321|Q9Y2M5-2|KLHL20	nc|ENSG00000076321|Q9Y2M5-2|KLHL20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7773132324219	2	465.775688	929.536823	0.5788	0.00026959	3.5248	0.0016418	4.1036	0.0019114	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.77314	1	7628	7628		40.778	3.6191	1	344270			27009	1355	18221	18231	30705	30705					0.06923605922111165
LGGGVLVALL	10	Unmodified	_LGGGVLVALL_					0	0	0			REV__ENST00000482818.1_1_22:29725562-29725973:-|nuORF	REV__ENST00000482818.1_1_22:29725562-29725973:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3008117675781	2	456.299853	910.585153	-0.28505	-0.00013007	2.6178	0.0011945	2.3328	0.0010645	456.3009409160632	46.468	1.3803	46.389	45.933	47.313	-0.079002					82	40	3	0	0	0	0.85108	1	3430	3430		19.36	1.995	1	401880	+		27010	27473	18222	18232	30706	30706					0.1262842283365444
LGGHFGIV	8	Unmodified	_LGGHFGIV_					0	0	0			REV__nc|ENSG00000145934|Q9NT68-2|TENM2;REV__ENSG00000218336|ENST00000511685|TENM3	REV__ENSG00000218336|ENST00000511685|TENM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.2281188964844	2	400.226688	798.438824	-0.50486	-0.00020206	4.0747	0.0016308	3.5699	0.0014288	400.2285588174541	55.339	1.7133	55.312	54.396	56.109	-0.027279					91	48	3	0	0	0	0.80127	4	5007	5007;5019;5031;5077		43.626	10.133	1	614190	+		27011	19977;23698	18223	18233	30707;30708;30709;30710	30707					0.03154165388434649
LGGHFGIV	8	Unmodified	_LGGHFGIV_					0	0	0			REV__nc|ENSG00000145934|Q9NT68-2|TENM2;REV__ENSG00000218336|ENST00000511685|TENM3	REV__ENSG00000218336|ENST00000511685|TENM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.2278747558594	2	400.226688	798.438824	1.9396	0.0007763	0.82933	0.00033192	2.769	0.0011082	400.22746720749507	55.46	1.1518	55.491	54.998	56.15	0.030838					66	28	3	0	0	0	0.80127	1	4963	4963		16.705	0	1	652610	+		27012	19977;23698	18223	18233	30711	30711					0.03154165388434649
LGGHGLFV	8	Unmodified	_LGGHGLFV_					0	0	0			REV__ENST00000325147.13_1_11:203487-204003:-|nuORF	REV__ENST00000325147.13_1_11:203487-204003:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2264404296875	2	400.226688	798.438824	1.6042	0.00064204	1.2189	0.00048786	2.8231	0.0011299	400.22746352224425	50.179	1.111	50.626	50.02	51.131	0.44761					49	26	3	0	0	0	0.84567	1	4976	4976		24.504	0	1	615680	+		27013	25055	18224	18234	30712	30712					0.0315416538842328
LGGHPQPT	8	Unmodified	_LGGHPQPT_					0	0	0		nc|ENSG00000172534|P51610-2|HCFC1;ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.21282958984375	2	403.711402	805.408252	1.5397	0.00062159	-0.88952	-0.00035911	0.65017	0.00026248	403.71117100677117	33.27	0.21235	33.44	33.271	33.484	0.16971					6	4	2	0	0	0	0.4196	1	2387	2387		12.959	8.6429	1	22681			27014	6775	18225	18235	30713	30713					-0.0022361299662634337
LGGKVLSK	8	Unmodified	_LGGKVLSK_					0	0	0			REV__nc|ENSG00000168906|P31153-2|MAT2A	REV__nc|ENSG00000168906|P31153-2|MAT2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2118835449219	2	401.263271	800.511988	0.73506	0.00029495	4.1665	0.0016718	4.9015	0.0019668	401.2649044357839	44.097	0.65275	44.547	44.2	44.853	0.45024					28	15	2	0	0	0	0.4196	1	4004	4004		16.473	0	1	547670	+		27015	21531	18226	18236	30714	30714					0.10375294111031508
LGGLFRRG	8	Unmodified	_LGGLFRRG_					0	0	0			REV__ENSG00000186094|ENST00000371839|AGBL4	REV__ENSG00000186094|ENST00000371839|AGBL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2635803222656	2	438.264136	874.51372	-1.2142	-0.00053214	-0.86056	-0.00037715	-2.0748	-0.00090929	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.80706	1	3524	3524		19.36	0	1	4828000	+		27016	22821	18227	18237	30715	30715					0.07144347919654592
LGGLGLVPL	9	Unmodified	_LGGLGLVPL_					0	0	0			REV__ENSG00000139318|ENST00000279488|DUSP6	REV__ENSG00000139318|ENST00000279488|DUSP6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7750549316406	2	419.773471	837.53239	-1.7976	-0.00075458	3.9115	0.0016419	2.1139	0.00088736	419.77504327395843	41.402	2.6775	41.816	41.329	44.007	0.4139					184	68	5	0	0	0	0.78292	1	3668	3668		29.842	0	1	169320000	+		27017	19533	18228	18238	30716	30716					0.10712464770847419
LGGLNLKP	8	Unmodified	_LGGLNLKP_					0	0	0			REV__nc|ENSG00000114742|Q8TAF3-5|WDR48	REV__nc|ENSG00000114742|Q8TAF3-5|WDR48	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7851257324219	2	406.255446	810.496338	-0.48906	-0.00019869	4.2906	0.0017431	3.8015	0.0015444	406.25707820218423	33.54	1.4072	33.484	33.178	34.585	-0.056385					67	31	3	0	0	0	0.4196	1	2101	2101		33.516	0	1	434120	+		27018	18062	18229	18239	30717	30717					0.08351007593989834
LGGLNLKP	8	Unmodified	_LGGLNLKP_					0	0	0			REV__nc|ENSG00000114742|Q8TAF3-5|WDR48	REV__nc|ENSG00000114742|Q8TAF3-5|WDR48	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.258056640625	2	406.255446	810.496338	2.3056	0.00093668	1.5887	0.0006454	3.8943	0.0015821	406.2559984924016	49.534	2.3468	49.538	48.533	50.88	0.0035973					123	57	3	0	0	0	0.86288	1	4205	4205		26.796	0	1	225190	+		27019	18062	18229	18239	30718	30718					0.08351007593989834
LGGLNLKP	8	Unmodified	_LGGLNLKP_					0	0	0			REV__nc|ENSG00000114742|Q8TAF3-5|WDR48	REV__nc|ENSG00000114742|Q8TAF3-5|WDR48	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25701904296875	2	406.255446	810.496338	0.016868	6.8526E-06	3.7223	0.0015122	3.7391	0.001519	406.25685626914105	33.24	0.97973	33.208	32.974	33.953	-0.032677					91	43	3	0	0	0	0.81548	1	1597	1597		20.482	0	1	414640	+		27020	18062	18229	18239	30719	30719					0.08351007593989834
LGGLPLPLA	9	Unmodified	_LGGLPLPLA_					0	0	0		nc|ENSG00000148204|Q5IJ48-3|CRB2;nc|ENSG00000148204|Q5IJ48-2|CRB2;ENSG00000148204|ENST00000373631|CRB2	nc|ENSG00000148204|Q5IJ48-3|CRB2	nc|ENSG00000148204|Q5IJ48-3|CRB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.7747497558594	2	425.773471	849.53239	-0.11951	-5.0886E-05	3.5324	0.001504	3.4129	0.0014531	425.7748940405711	39.012	1.3083	38.959	38.379	39.687	-0.052731					144	37	5	0	0	0	0.7932	2	2322	2322;2409		21.702	0	1	13488000			27021	4938	18230	18240	30720;30721	30720					0.10160464770842736
LGGLPLPLA	9	Unmodified	_LGGLPLPLA_					0	0	0		nc|ENSG00000148204|Q5IJ48-3|CRB2;nc|ENSG00000148204|Q5IJ48-2|CRB2;ENSG00000148204|ENST00000373631|CRB2	nc|ENSG00000148204|Q5IJ48-3|CRB2	nc|ENSG00000148204|Q5IJ48-3|CRB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7751159667969	2	425.773471	849.53239	0.348	0.00014817	2.8727	0.0012231	3.2207	0.0013713	425.77466249920843	37.645	1.0176	37.958	37.411	38.429	0.31312					95	25	5	0	0	0	0.7932	1	3075	3075		21.702	0	1	45114000			27022	4938	18230	18240	30722	30722					0.10160464770842736
LGGPRPGR	8	Unmodified	_LGGPRPGR_					0	0	0			REV__ENSG00000251322|ENST00000262795|SHANK3	REV__ENSG00000251322|ENST00000262795|SHANK3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.23626708984375	2	405.240661	808.46677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.506	1	63.629	63.129	64.129	0.12252								0	0	0	0.29344	1	5568	5568		31.955	5.1588	1		+		27023	23873	18231	18241	30723	30723					0.054874883685215536
LGGQRCLP	8	Unmodified	_LGGQRCLP_					0	0	0			REV__ENST00000216181.9_1_22:36705424-36708118:-|nuORF	REV__ENST00000216181.9_1_22:36705424-36708118:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2275695800781	2	422.228905	842.443257	-1.8003	-0.00076015	-0.35926	-0.00015169	-2.1596	-0.00091184	422.2286994830419	63.649	0.63203	63.769	63.398	64.03	0.12004					57	31	2	0	0	0	0.80706	1	5574	5574		19.36	1.0356	1	224330	+		27024	24125	18232	18242	30724	30724					0.015733065396602797
LGGQRCLP	8	Unmodified	_LGGQRCLP_					0	0	0			REV__ENST00000216181.9_1_22:36705424-36708118:-|nuORF	REV__ENST00000216181.9_1_22:36705424-36708118:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2276611328125	2	422.228905	842.443257	0.34218	0.00014448	-2.5356	-0.0010706	-2.1934	-0.00092611	422.22773189894326	57.189	1.8785	57.295	56.929	58.807	0.1055					192	88	3	0	0	0	0.86288	1	4856	4856		26.796	0	1	718200	+		27025	24125	18232	18242	30725	30725					0.015733065396602797
LGGRGSSSSE	10	Unmodified	_LGGRGSSSSE_					0	0	0		ENST00000535524.1_1_12:121691250-121712353:-|nuORF;nc|ENSG00000110931|Q96RR4-6|CAMKK2;nc|ENSG00000110931|Q96RR4-5|CAMKK2;nc|ENSG00000110931|Q96RR4-2|CAMKK2;nc|ENSG00000110931|Q96RR4-3|CAMKK2;nc|ENSG00000110931|Q96RR4-4|CAMKK2;nc|ENSG00000110931|Q96RR4-7|CAMKK2;ENSG00000110931|ENST00000404169|CAMKK2	ENST00000535524.1_1_12:121691250-121712353:-|nuORF	ENST00000535524.1_1_12:121691250-121712353:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.72265625	2	468.722695	935.430838	4.2712	0.002002	-3.108	-0.0014568	1.1631	0.00054519	468.7211210268171	107.75	0.21207	107.87	107.7	107.91	0.11715					12	7	3	0	0	0	0.86587	1	13179	13179		29.17	2.374	1	3720300			27026	2554	18233	18243	30726	30726					-0.03946058389658447
LGGRRVWF	8	Unmodified	_LGGRRVWF_					0	0	0		ENST00000555762.1_1_14:94517539-94521656:-|nuORF	ENST00000555762.1_1_14:94517539-94521656:-|nuORF	ENST00000555762.1_1_14:94517539-94521656:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.78497314453125	2	495.785236	989.555919	-0.050399	-2.4987E-05	-1.5114	-0.00074935	-1.5618	-0.00077433	495.78446455271546	56.959	0.52929	56.947	56.744	57.273	-0.012203					26	15	2	0	0	0	0.92176	1	5138	5138		46.766	4.3703	1	174970			27027	13736	18234	18244	30727	30727					0.060723233280327804
LGGSGRRP	8	Unmodified	_LGGSGRRP_					0	0	0		ENST00000594807.5_1_19:14640508-14674579:+|nuORF	ENST00000594807.5_1_19:14640508-14674579:+|nuORF	ENST00000594807.5_1_19:14640508-14674579:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2279052734375	2	400.230294	798.446034	-1.8752	-0.0007505	-2.6209	-0.001049	-4.4961	-0.0017995	400.22927707495484	54.825	2.6613	54.881	53.254	55.915	0.055611					132	91	2	0	0	0	0.884	1	4522	4522		33.516	3.0119	1	1098100			27028	14321	18235	18245	30728	30728					0.038748979888509893
LGGTGETPAR	10	Unmodified	_LGGTGETPAR_					0	0	0		nc|ENSG00000134444|Q9P260|RELCH;ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH	nc|ENSG00000134444|Q9P260|RELCH	nc|ENSG00000134444|Q9P260|RELCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.7514953613281	2	479.751256	957.487959	0.1967	9.4366E-05	0.33496	0.0001607	0.53166	0.00025506	479.7511384255675	31.142	0.66008	31.16	30.879	31.539	0.01836					33	16	3	0	0	0	0.21391	2	1654	1645;1654		82.75	8.4954	1	158910			27029	3935	18236	18246	30729;30730	30730					0.007514088867083046
LGGTGETPAR	10	Unmodified	_LGGTGETPAR_					0	0	0		nc|ENSG00000134444|Q9P260|RELCH;ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH	nc|ENSG00000134444|Q9P260|RELCH	nc|ENSG00000134444|Q9P260|RELCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.7514343261719	2	479.751256	957.487959	-0.23225	-0.00011142	0.21564	0.00010346	-0.016608	-7.9676E-06	479.75127670684145	31.252	0.69834	31.201	30.869	31.567	-0.051031					31	16	3	0	0	0	0.57924	2	1757	1746;1757		51.193	7.3869	1	201830			27030	3935	18236	18246	30731;30732	30732					0.007514088867083046
LGGTGETPAR	10	Unmodified	_LGGTGETPAR_					0	0	0		nc|ENSG00000134444|Q9P260|RELCH;ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH	nc|ENSG00000134444|Q9P260|RELCH	nc|ENSG00000134444|Q9P260|RELCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.75091552734375	2	479.751256	957.487959	-1.1794	-0.00056582	1.0367	0.00049735	-0.14272	-6.8469E-05	479.7516678352157	31.194	0.81332	31.184	30.842	31.655	-0.010656					35	18	3	0	0	0	0.30722	2	1691	1680;1691		71.877	3.2771	1	189750			27031	3935	18236	18246	30733;30734	30734					0.007514088867083046
LGGTGETPAR	10	Unmodified	_LGGTGETPAR_					0	0	0		nc|ENSG00000134444|Q9P260|RELCH;ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH	nc|ENSG00000134444|Q9P260|RELCH	nc|ENSG00000134444|Q9P260|RELCH	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	479.751256	957.487959	-1.8721	-0.00089814	1.8705	0.00089735	-0.0016332	-7.8353E-07	479.75202472836827	31.259	0.37741	31.259	31.066	31.444	0	0.042901	0.0011241	NaN	82.75	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49932			27032	3935	18236	18246							0.007514088867083046
LGGTGETPAR	10	Unmodified	_LGGTGETPAR_					0	0	0		nc|ENSG00000134444|Q9P260|RELCH;ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH	nc|ENSG00000134444|Q9P260|RELCH	nc|ENSG00000134444|Q9P260|RELCH	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	479.751256	957.487959	-0.43155	-0.00020704	-0.93942	-0.00045069	-1.371	-0.00065772	479.75125749277873	31.274	0.47158	31.278	31.015	31.486	0.0037193	0.061548	-0.001572	NaN	82.75	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85792			27033	3935	18236	18246							0.007514088867083046
LGGTGSLRPAS	11	Unmodified	_LGGTGSLRPAS_					0	0	0		ENST00000393249.6_1_12:76931741-76953307:-|nuORF;ENST00000553139.5_1_12:76844762-76953307:-|nuORF;ENST00000393250.8_1_12:76844735-76953307:-|nuORF	ENST00000393249.6_1_12:76931741-76953307:-|nuORF	ENST00000393249.6_1_12:76931741-76953307:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2796630859375	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.69995	1	9380	9380		31.53	1.2121	1	1903500			27034	11042	18237	18247	30735	30735					0.03911670812135526
LGGTGSLRPAS	11	Unmodified	_LGGTGSLRPAS_					0	0	0		ENST00000393249.6_1_12:76931741-76953307:-|nuORF;ENST00000553139.5_1_12:76844762-76953307:-|nuORF;ENST00000393250.8_1_12:76844735-76953307:-|nuORF	ENST00000393249.6_1_12:76931741-76953307:-|nuORF	ENST00000393249.6_1_12:76931741-76953307:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.28009033203125	2	508.28018	1014.54581	0.65224	0.00033152	-0.58773	-0.00029873	0.064515	3.2792E-05	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.55601	1	10348	10348		47.96	1.9873	1	1819500			27035	11042	18237	18247	30736	30736					0.03911670812135526
LGGVFLKRR	9	Unmodified	_LGGVFLKRR_					0	0	0			REV__ENST00000589484.5_1_19:1417247-1428848:+|nuORF	REV__ENST00000589484.5_1_19:1417247-1428848:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3033447265625	2	523.335093	1044.65563	-0.17615	-9.2187E-05	-2.7549	-0.0014417	-2.931	-0.0015339	523.3336198988426	88.602	0.20886	88.809	88.748	88.957	0.20731					6	4	2	0	0	0	0.20789	1	8812	8812		30.504	15.639	1	45077	+		27036	29162	18238	18248	30737	30737					0.1350914094196014
LGGVHVML	8	Unmodified	_LGGVHVML_					0	0	0			REV__nc|ENSG00000160593|Q86YT9-4|JAML	REV__nc|ENSG00000160593|Q86YT9-4|JAML	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2372741699219	2	413.236199	824.457844	2.3964	0.00099028	2.7089	0.0011194	5.1053	0.0021097	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.84567	1	7326	7326		24.504	2.5441	1	2127000	+		27037	20725	18239	18249	30738	30738					0.03859378687820936
LGGVIPLGLL	10	Unmodified	_LGGVIPLGLL_					0	0	0		nc|ENSG00000103196|Q9H0B8-5|CRISPLD2;nc|ENSG00000103196|Q9H0B8-4|CRISPLD2;ENST00000565561.1_1_16:84853723-84872578:+|nuORF;ENST00000566431.5_1_16:84853723-84896622:+|nuORF;nc|ENSG00000103196|Q9H0B8-3|CRISPLD2;ENST00000569262.5_1_16:84853723-84906729:+|nuORF;nc|ENSG00000103196|Q9H0B8-2|CRISPLD2;ENSG00000103196|ENST00000262424|CRISPLD2	nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.32196044921875	2	476.315503	950.616454	-0.94197	-0.00044867	3.552	0.0016919	2.61	0.0012432	476.31685556758947	49.444	1.2178	49.469	48.887	50.105	0.025574					38	30	2	0	0	0	0.86786	1	3829	3829		26.796	1.3459	1	70008			27038	2061	18240	18250	30739	30739					0.13916995867759852
LGGVIPLGLL	10	Unmodified	_LGGVIPLGLL_					0	0	0		nc|ENSG00000103196|Q9H0B8-5|CRISPLD2;nc|ENSG00000103196|Q9H0B8-4|CRISPLD2;ENST00000565561.1_1_16:84853723-84872578:+|nuORF;ENST00000566431.5_1_16:84853723-84896622:+|nuORF;nc|ENSG00000103196|Q9H0B8-3|CRISPLD2;ENST00000569262.5_1_16:84853723-84906729:+|nuORF;nc|ENSG00000103196|Q9H0B8-2|CRISPLD2;ENSG00000103196|ENST00000262424|CRISPLD2	nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	476.315503	950.616454	-0.32796	-0.00015621	2.6303	0.0012528	2.3023	0.0010966	476.3166200681529	49.478	1.1638	49.385	48.985	50.149	-0.093182	-0.15933	-0.00057572	NaN	26.796	40	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80071			27039	2061	18240	18250							0.13916995867759852
LGGVNKHS	8	Unmodified	_LGGVNKHS_					0	0	0		ENSG00000165474|ENST00000382848|GJB2	ENSG00000165474|ENST00000382848|GJB2	ENSG00000165474|ENST00000382848|GJB2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.24847412109375	2	406.224677	810.434801	-1.9276	-0.00078304	1.565	0.00063572	-0.36264	-0.00014731	406.2255722936639	88.225	0.56919	88.395	88.211	88.78	0.16923					20	13	3	0	0	0	0.4196	1	8721	8721		24.203	0	1	321030			27040	6083	18241	18251	30740	30740					0.022000758947001486
LGGVPGMSPH	10	Oxidation (M)	_LGGVPGM(Oxidation (M))SPH_		LGGVPGM(1)SPH		LGGVPGM(48)SPH	0	0	1			REV__ENST00000373209.2_1_10:72358109-72358358:-|nuORF	REV__ENST00000373209.2_1_10:72358109-72358358:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.2363586425781	2	484.236927	966.459301	-0.09072	-4.393E-05	-1.405	-0.00068037	-1.4958	-0.0007243	484.23621822802284	87.004	0.94917	87.072	86.495	87.444	0.067444					68	21	4	0	0	0	0.6398	1	8781	8781		47.916	7.343	1	2724000	+		27041	25752	18242	18252	30741	30741		400			-0.02527032014074848
LGGVPGMSPH	10	Oxidation (M)	_LGGVPGM(Oxidation (M))SPH_		LGGVPGM(1)SPH		LGGVPGM(48)SPH	0	0	1			REV__ENST00000373209.2_1_10:72358109-72358358:-|nuORF	REV__ENST00000373209.2_1_10:72358109-72358358:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.23577880859375	2	484.236927	966.459301	0.89404	0.00043293	-2.6433	-0.00128	-1.7493	-0.00084706	484.23564836465897	85.371	0.51987	85.299	84.977	85.496	-0.07196					43	11	5	0	0	0	0.6398	1	8771	8771		47.916	7.343	1	1266900	+		27042	25752	18242	18252	30742	30742		400			-0.02527032014074848
LGGVVGPLGHL	11	Unmodified	_LGGVVGPLGHL_					0	0	0			REV__ENSG00000112077|ENST00000371175|RHAG	REV__ENSG00000112077|ENST00000371175|RHAG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8036804199219	2	509.805834	1017.59712	0.31699	0.0001616	-4.4775	-0.0022826	-4.1605	-0.002121	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.69735	1	10046	10046		31.955	1.6371	1	2635100	+		27043	17913	18243	18253	30743	30743					0.08902039576844345
LGGWAGLGL	9	Unmodified	_LGGWAGLGL_					0	0	0		ENST00000296490.7_1_3:52290854-52290965:-|nuORF	ENST00000296490.7_1_3:52290854-52290965:-|nuORF	ENST00000296490.7_1_3:52290854-52290965:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.2375793457031	2	422.239796	842.465038	1.7913	0.00075635	-3.2044	-0.001353	-1.4131	-0.00059668	422.2383363429697	70.18	1.527	70.215	69.949	71.476	0.035622					112	79	2	0	0	0	0.78292	1	6714	6714		29.842	1.5873	1	383600			27044	9734	18244	18254	30744	30744					0.03750434559901805
LGGWLLRAP	9	Unmodified	_LGGWLLRAP_					0	0	0			REV__ENST00000367521.5_1_1:183906707-183906932:-|nuORF	REV__ENST00000367521.5_1_1:183906707-183906932:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7945861816406	2	491.795269	981.575986	-0.41148	-0.00020237	1.3216	0.00064997	0.91013	0.0004476	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.7932	1	4507	4507		25.45	2.4077	1	887820	+		27045	25568	18245	18255	30745	30745					0.08446074267999393
LGGYLAVL	8	Unmodified	_LGGYLAVL_					0	0	0		ENSG00000198569|ENST00000673835|SLC34A3	ENSG00000198569|ENST00000673835|SLC34A3	ENSG00000198569|ENST00000673835|SLC34A3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.230712890625	2	403.244547	804.47454	0.40544	0.00016349	1.2701	0.00051216	1.6755	0.00067565	403.2442526332525	64.353	0.61824	64.477	64.125	64.744	0.12396					42	22	3	0	0	0	0.4196	1	5660	5660		43.626	1.1516	1	80468			27046	8289	18246	18256	30746	30746					0.06448202845422202
LGHAGEPLLGP	11	Unmodified	_LGHAGEPLLGP_					0	0	0			REV__ENST00000308893.8_1_16:29989574-29990151:+|nuORF	REV__ENST00000308893.8_1_16:29989574-29990151:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3185424804688	2	530.792924	1059.57129	0.12826	6.8077E-05	2.9938	0.0015891	3.1221	0.0016572	530.7943965986794	94.449	0.81084	94.884	94.676	95.487	0.43539					31	19	2	0	0	0	0.16958	1	11366	11366		25.574	10.709	1	309540	+		27047	24867	18247	18257	30747	30747					0.043891453345850096
LGHEDVALDIY	11	Unmodified	_LGHEDVALDIY_					0	0	0			REV__ENST00000528758.1_1_11:7507087-7531416:+|nuORF	REV__ENST00000528758.1_1_11:7507087-7531416:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.814208984375	2	622.81151	1243.60847	0.7619	0.00047452	3.2004	0.0019932	3.9623	0.0024678	622.81338251894	87.804	0.77916	88.253	87.934	88.713	0.44893					54	18	4	0	0	0	0.6921	1	10324	10324		32.812	6.1195	1	1509600	+		27048	28254	18248	18258	30748	30748					-0.0035922791032589885
LGHGEANI	8	Unmodified	_LGHGEANI_					0	0	0		ENSG00000170456|ENST00000389082|DENND5B;nc|ENSG00000170456|Q6ZUT9-2|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2480773925781	2	405.70886	809.403166	1.3663	0.00055431	-4.2987	-0.001744	-2.9324	-0.0011897	405.7077824656049	90.524	0.66904	90.454	90.09	90.759	-0.069977					21	15	2	0	0	0	0.4196	1	9464	9464		15.642	11.657	1	47032			27049	6592	18249	18259	30749	30749					-0.009159168592532296
LGIAELIIA	9	Unmodified	_LGIAELIIA_					0	0	0			REV__nc|ENSG00000115902|P43007-2|SLC1A4	REV__nc|ENSG00000115902|P43007-2|SLC1A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.79022216796875	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.7932	1	2643	2643		20.482	2.1574	1	1012300	+		27050	18160	18250	18260	30750	30750					0.10984716596749422
LGIAELIIA	9	Unmodified	_LGIAELIIA_					0	0	0			REV__nc|ENSG00000115902|P43007-2|SLC1A4	REV__nc|ENSG00000115902|P43007-2|SLC1A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79180908203125	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.78851	1	3211	3211		28.254	1.4582	1	662040	+		27051	18160	18250	18260	30751	30751					0.10984716596749422
LGIAELIIA	9	Unmodified	_LGIAELIIA_					0	0	0			REV__nc|ENSG00000115902|P43007-2|SLC1A4	REV__nc|ENSG00000115902|P43007-2|SLC1A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79193115234375	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.78851	1	3193	3193		28.254	1.4582	1	608260	+		27052	18160	18250	18260	30752	30752					0.10984716596749422
LGIAELIIA	9	Unmodified	_LGIAELIIA_					0	0	0			REV__nc|ENSG00000115902|P43007-2|SLC1A4	REV__nc|ENSG00000115902|P43007-2|SLC1A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79083251953125	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.7932	2	2766	2766;2896		20.482	2.1574	1	605230	+		27053	18160	18250	18260	30753;30754	30753					0.10984716596749422
LGIAELIIA	9	Unmodified	_LGIAELIIA_					0	0	0			REV__nc|ENSG00000115902|P43007-2|SLC1A4	REV__nc|ENSG00000115902|P43007-2|SLC1A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7918395996094	2	456.791861	911.569169	-0.5708	-0.00026074	3.3989	0.0015526	2.8281	0.0012919	456.79332762585267	37.831	1.4155	38.144	37.663	39.079	0.31312					135	35	5	0	0	0	0.67235	1	3099	3099		42.474	5.3154	1	9282000	+		27054	18160	18250	18260	30755	30755					0.10984716596749422
LGIAQRLEH	9	Unmodified	_LGIAQRLEH_					0	0	0			REV__ENST00000479199.1_1_2:163200728-163213435:+|nuORF	REV__ENST00000479199.1_1_2:163200728-163213435:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.13916015625	2	518.79854	1035.58253	0.0043271	2.2449E-06	-1.3604	-0.00070579	-1.3561	-0.00070354	518.7977189723682	80.79	0.99036	81.317	80.864	81.855	0.52676					43	23	2	0	0	0	0.20789	1	9356	9356		31.955	1.4512	1	682740	+		27055	18103	18251	18261	30756	30756					0.06615967428706426
LGIAQRLEH	9	Unmodified	_LGIAQRLEH_					0	0	0			REV__ENST00000479199.1_1_2:163200728-163213435:+|nuORF	REV__ENST00000479199.1_1_2:163200728-163213435:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	518.79854	1035.58253	0.18909	9.8099E-05	-1.4629	-0.00075895	-1.2738	-0.00066085	518.7976029124582	80.873	0.94183	81.295	80.806	81.748	0.4215	-0.011043	-5.913E-05	NaN	31.955	53	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	753180	+		27056	18103	18251	18261							0.06615967428706426
LGIDVVALI	9	Unmodified	_LGIDVVALI_					0	0	0			REV__ENSG00000180919|ENST00000316529|OR56B4	REV__ENSG00000180919|ENST00000316529|OR56B4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7928466796875	2	456.791861	911.569169	-0.042653	-1.9484E-05	2.8269	0.0012913	2.7842	0.0012718	456.79307389883803	36.432	2.1584	36.413	35.42	37.578	-0.018673					171	47	5	0	0	0	0.78851	1	2283	2283		28.254	1.4582	1	4460800	+		27057	22427	18252	18262	30757	30757					0.10984716596760791
LGIDVVALI	9	Unmodified	_LGIDVVALI_					0	0	0			REV__ENSG00000180919|ENST00000316529|OR56B4	REV__ENSG00000180919|ENST00000316529|OR56B4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7917175292969	2	456.791861	911.569169	0.23747	0.00010847	2.1705	0.00099146	2.408	0.0010999	456.79269786067573	42.365	2.4539	42.43	41.781	44.235	0.065037					168	63	3	0	0	0	0.76402	1	2829	2829		35.201	1.6851	1	556840	+		27058	22427	18252	18262	30758	30758					0.10984716596760791
LGIGPGKVQ	9	Unmodified	_LGIGPGKVQ_					0	0	0			REV__ENSG00000177465|ENST00000326303|ACOT4	REV__ENSG00000177465|ENST00000326303|ACOT4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7803039550781	2	434.766178	867.517802	-0.098548	-4.2845E-05	3.2229	0.0014012	3.1244	0.0013584	434.76760200737994	39.532	0.30809	39.479	39.191	39.499	-0.052731					11	7	2	0	0	0	0.20789	1	2431	2431		42.474	0	1	86602	+		27059	22206	18253	18263	30759	30759					0.07874392622716186
LGIGSCHLPG	10	Unmodified	_LGIGSCHLPG_					0	0	0		ENST00000495017.5_1_22:45127230-45133124:+|nuORF	ENST00000495017.5_1_22:45127230-45133124:+|nuORF	ENST00000495017.5_1_22:45127230-45133124:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.2467041015625	2	477.247295	952.480036	-0.8935	-0.00042642	-0.51654	-0.00024652	-1.41	-0.00067294	477.2468568382562	68.342	1.3917	68.478	67.814	69.206	0.13522					122	54	3	0	0	0	0.50394	2	6125	6080;6125		55.504	0	1	604720			27060	12760	18254	18264	30760;30761	30761					0.0018955836559371164
LGIGSCHLPG	10	Unmodified	_LGIGSCHLPG_					0	0	0		ENST00000495017.5_1_22:45127230-45133124:+|nuORF	ENST00000495017.5_1_22:45127230-45133124:+|nuORF	ENST00000495017.5_1_22:45127230-45133124:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	477.247295	952.480036	1.2019	0.00057358	-1.7824	-0.00085066	-0.58056	-0.00027707	477.24677187746994	67.731	0.16542	68.116	67.983	68.149	0.38482	-0.28936	-0.0007114	NaN	55.504	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176160			27061	12760	18254	18264							0.0018955836559371164
LGIGSVLPL	9	Unmodified	_LGIGSVLPL_					0	0	0		nc|ENSG00000162437|Q9HCJ3-2|RAVER2;ENSG00000162437|ENST00000294428|RAVER2	nc|ENSG00000162437|Q9HCJ3-2|RAVER2	nc|ENSG00000162437|Q9HCJ3-2|RAVER2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7802429199219	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.7932	1	2467	2467		26.796	0	1	8013100			27062	5691	18255	18265	30762	30762					0.10388447425293634
LGIIALVTSPL	11	Unmodified	_LGIIALVTSPL_					0	0	0		nc|ENSG00000137393|Q7Z419-2|RNF144B;ENSG00000137393|ENST00000259939|RNF144B	nc|ENSG00000137393|Q7Z419-2|RNF144B	nc|ENSG00000137393|Q7Z419-2|RNF144B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.8513793945312	2	548.85245	1095.69035	-2.6526	-0.0014559	2.9042	0.001594	0.25159	0.00013809	548.8539163476257	40.504	1.0376	40.896	40.377	41.415	0.39209					80	28	4	0	0	0	0.67493	1	3437	3437		35.618	7.736	1	6533500			27063	4194	18256	18266	30763	30763					0.14632919239443254
LGIIITAAP	9	Unmodified	_LGIIITAAP_					0	0	0			REV__ENST00000502692.5_1_11:66313918-66328094:+|nuORF	REV__ENST00000502692.5_1_11:66313918-66328094:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7788391113281	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.78851	1	2693	2693		28.254	1.4582	1	2581600	+		27064	27828	18257	18267	30764	30764					0.10388447425270897
LGIIMGYI	8	Unmodified	_LGIIMGYI_					0	0	0		nc|ENSG00000134444|Q9P260|RELCH;ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH	nc|ENSG00000134444|Q9P260|RELCH	nc|ENSG00000134444|Q9P260|RELCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.25506591796875	2	440.254057	878.493561	-0.15864	-6.9843E-05	3.0948	0.0013625	2.9362	0.0012927	440.2552769905188	60.568	0.57997	60.556	60.24	60.82	-0.012203					32	14	3	0	0	0	0.84567	1	5609	5609		24.504	0	1	187610			27065	3935	18258	18268	30765	30765					0.049454161448238665
LGIKKKPREGK	11	Unmodified	_LGIKKKPREGK_					0	0	0		ENST00000514606.1_1_4:139988805-140005344:-|nuORF;nc|ENSG00000109381|Q15723-2|ELF2;nc|ENSG00000109381|Q15723-3|ELF2;nc|ENSG00000109381|Q15723-1|ELF2;ENSG00000109381|ENST00000686138|ELF2	ENST00000514606.1_1_4:139988805-140005344:-|nuORF	ENST00000514606.1_1_4:139988805-140005344:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.6051940917969	3	418.60659	1252.79794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.174	1	49.081	48.581	49.581	-0.093178								0	0	0	0.56276	1	3790	3790		24.276	6.4428	1				27066	2459	18259	18269	30766	30766					0.18165308893503607
LGIKSKVYTRT	11	Unmodified	_LGIKSKVYTRT_					0	0	0		ENSG00000087842|ENST00000380420|PIR	ENSG00000087842|ENST00000380420|PIR	ENSG00000087842|ENST00000380420|PIR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5924377441406	3	422.590717	1264.75032	2.1003	0.00088759	2.5397	0.0010733	4.6401	0.0019609	422.59169327867005	49.208	2.7795	49.208	47.99	50.769	0.00016785					227	65	5	0	0	0	0.76579	1	4264	4264		18.531	0.69791	1	2361900			27067	1580	18260	18270	30767	30767					0.12853609902640528
LGIKSKVYTRT	11	Unmodified	_LGIKSKVYTRT_					0	0	0		ENSG00000087842|ENST00000380420|PIR	ENSG00000087842|ENST00000380420|PIR	ENSG00000087842|ENST00000380420|PIR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5923767089844	3	422.590717	1264.75032	1.8674	0.00078915	3.7839	0.001599	5.6513	0.0023882	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.75121	1	4946	4946		21.78	1.4654	1	997830			27068	1580	18260	18270	30768	30768					0.12853609902640528
LGILAAFHLPR	11	Unmodified	_LGILAAFHLPR_					0	0	0		ENSG00000169962|ENST00000339381|TAS1R3	ENSG00000169962|ENST00000339381|TAS1R3	ENSG00000169962|ENST00000339381|TAS1R3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3670654296875	2	604.369133	1206.72371	-0.11879	-7.1791E-05	-4.2459	-0.0025661	-4.3646	-0.0026379	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.72918	1	11732	11732		26.693	7.5894	1	64334000			27069	6546	18261	18271	30769	30769					0.12861965801971564
LGILAVVDI	9	Unmodified	_LGILAVVDI_					0	0	0		ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79302978515625	2	456.791861	911.569169	-1.1724	-0.00053555	3.9802	0.0018181	2.8078	0.0012826	456.7935742947897	38.88	1.6337	38.833	37.942	39.576	-0.047001					120	37	4	0	0	0	0.7932	1	2758	2758		26.796	1.3459	1	2323700			27070	7359	18262	18272	30770	30770					0.10984716596760791
LGILAVVDI	9	Unmodified	_LGILAVVDI_					0	0	0		ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7920837402344	2	456.791861	911.569169	-1.4135	-0.00064567	2.5195	0.0011509	1.106	0.00050522	456.7928761630725	39.835	2.0275	40.401	39.33	41.358	0.56588					154	50	4	0	0	0	0.76996	2	3373	3279;3373		33.516	4.366	1	4024400			27071	7359	18262	18272	30771;30772	30772					0.10984716596760791
LGILIASLDM	10	Unmodified	_LGILIASLDM_					0	0	0		nc|ENSG00000124067|Q9UP95-4|SLC12A4;nc|ENSG00000124067|Q9UP95-3|SLC12A4;nc|ENSG00000124067|Q9UP95-5|SLC12A4;nc|ENSG00000124067|Q9UP95-2|SLC12A4;nc|ENSG00000124067|Q9UP95-6|SLC12A4;ENSG00000124067|ENST00000316341|SLC12A4;nc|ENSG00000124067|Q9UP95-7|SLC12A4	nc|ENSG00000124067|Q9UP95-4|SLC12A4	nc|ENSG00000124067|Q9UP95-4|SLC12A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3042602539062	2	523.301736	1044.58892	1.1935	0.00062456	2.3787	0.0012448	3.5722	0.0018693	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.85934	1	10261	10261		35.618	1.4457	1	11944000			27072	3300	18263	18273	30773	30773					0.06840724545190824
LGILIFYTAS	10	Unmodified	_LGILIFYTAS_					0	0	0			REV__ENSG00000180785|ENST00000396952|OR51E1	REV__ENSG00000180785|ENST00000396952|OR51E1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.3176879882812	2	549.3157	1096.61685	-0.48303	-0.00026534	4.2887	0.0023558	3.8056	0.0020905	549.3179926126767	101.27	2.2263	101.27	100.73	102.96	0					128	54	4	0	0	0	0.84112	2	10306	10306;10342		37.159	6.5902	1	1196600	+		27073	22417	18264	18274	30774;30775	30774					0.07240370796921525
LGILLVTSP	9	Unmodified	_LGILLVTSP_					0	0	0		ENST00000472488.5_1_1:160085570-160106822:+|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7912292480469	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.67235	1	3235	3235		42.474	8.9589	1	662040			27074	12263	18265	18275	30776	30776					0.10984716596760791
LGILLVTSP	9	Unmodified	_LGILLVTSP_					0	0	0		ENST00000472488.5_1_1:160085570-160106822:+|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79315185546875	2	456.791861	911.569169	-0.85953	-0.00039263	3.5719	0.0016316	2.7123	0.001239	456.7934335420697	36.323	3.5767	36.267	33.824	37.401	-0.055901					213	80	5	0	0	0	0.5393	1	2404	2404		50.025	7.5501	1	4833100			27075	12263	18265	18275	30777	30777					0.10984716596760791
LGILLVTSP	9	Unmodified	_LGILLVTSP_					0	0	0		ENST00000472488.5_1_1:160085570-160106822:+|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7923889160156	2	456.791861	911.569169	-1.2485	-0.0005703	3.083	0.0014083	1.8345	0.000838	456.7931433333729	40.143	1.4449	40.149	39.563	41.008	0.0065041					84	46	2	0	0	0	0.7932	1	2536	2536		24.203	0	1	1011500			27076	12263	18265	18275	30778	30778					0.10984716596760791
LGILLVTSP	9	Unmodified	_LGILLVTSP_					0	0	0		ENST00000472488.5_1_1:160085570-160106822:+|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7926330566406	2	456.791861	911.569169	0.19556	8.933E-05	2.7159	0.0012406	2.9114	0.0013299	456.79296638202106	38.11	0.49987	38.204	37.924	38.424	0.094318					45	16	3	0	0	0	0.7932	1	2239	2239		24.203	0	1	1181300			27077	12263	18265	18275	30779	30779					0.10984716596760791
LGILPNVV	8	Unmodified	_LGILPNVV_					0	0	0			REV__ENSG00000004534|ENST00000266022|RBM6	REV__ENSG00000004534|ENST00000266022|RBM6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7669677734375	2	412.765646	823.516739	-1.8859	-0.00077844	3.9578	0.0016337	2.0719	0.00085522	412.7678129581843	48.855	3.3742	48.881	47.541	50.915	0.025574					176	94	2	0	0	0	0.87276	1	3763	3763		29.842	4.3914	1	621000	+		27078	16058	18266	18276	30780	30780					0.09792178253815109
LGILPPSK	8	Unmodified	_LGILPPSK_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;ENST00000419533.1_1_1:19477984-19504233:-|nuORF	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2673034667969	2	412.765646	823.516739	-0.62558	-0.00025822	2.0435	0.0008435	1.4179	0.00058528	412.7673203899957	51.451	2.0511	51.366	50.837	52.888	-0.084538					105	61	2	0	0	0	0.87922	1	4137	4137		31.955	2.1133	1	311840			27079	3499	18267	18277	30781	30781					0.0979217825380374
LGILTSVPI	9	Unmodified	_LGILTSVPI_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7925109863281	2	456.791861	911.569169	0.10619	4.8505E-05	2.6551	0.0012128	2.7613	0.0012614	456.7929673289598	38.995	1.2001	38.965	38.494	39.694	-0.03027					96	27	4	0	0	0	0.7932	1	2756	2756		25.45	0	1	2198500			27080	3009	18268	18278	30782	30782					0.10984716596760791
LGILTSVPI	9	Unmodified	_LGILTSVPI_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79095458984375	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.7932	1	2920	2920		25.45	1.2474	1	548640			27081	3009	18268	18278	30783	30783					0.10984716596760791
LGILTSVPI	9	Unmodified	_LGILTSVPI_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7907409667969	2	456.791861	911.569169	0.23747	0.00010847	2.1705	0.00099146	2.408	0.0010999	456.79269786067573	42.365	2.4539	42.43	41.781	44.235	0.065037					168	63	3	0	0	0	0.7932	2	2783	2783;2868		24.203	1.1603	1	556840			27082	3009	18268	18278	30784;30785	30784					0.10984716596760791
LGILTSVPI	9	Unmodified	_LGILTSVPI_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7922668457031	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.7932	1	2907	2907		18.324	0.95945	1	605230			27083	3009	18268	18278	30786	30786					0.10984716596760791
LGILTSVPI	9	Unmodified	_LGILTSVPI_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7929382324219	2	456.791861	911.569169	-1.4135	-0.00064567	2.5195	0.0011509	1.106	0.00050522	456.7928761630725	39.835	2.0275	40.401	39.33	41.358	0.56588					154	50	4	0	0	0	0.7932	1	3337	3337		26.796	0	1	4024400			27084	3009	18268	18278	30787	30787					0.10984716596760791
LGIPITSVI	9	Unmodified	_LGIPITSVI_					0	0	0		ENSG00000155761|ENST00000336338|SPAG17	ENSG00000155761|ENST00000336338|SPAG17	ENSG00000155761|ENST00000336338|SPAG17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79156494140625	2	456.791861	911.569169	-2.1986	-0.0010043	3.4286	0.0015662	1.23	0.00056186	456.7933193778514	39.928	2.2	40.296	39.048	41.248	0.36797					193	55	5	0	0	0	0.7932	1	3226	3226		25.45	0	1	10973000			27085	5340	18269	18279	30788	30788					0.10984716596760791
LGIPLDQVNFV	11	Unmodified	_LGIPLDQVNFV_					0	0	0		nc|ENSG00000172197|Q6ZNC8-3|MBOAT1;ENSG00000172197|ENST00000324607|MBOAT1	nc|ENSG00000172197|Q6ZNC8-3|MBOAT1	nc|ENSG00000172197|Q6ZNC8-3|MBOAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.8997497558594	3	405.564168	1213.67067	-1.8641	-0.000756	2.6155	0.0010607	0.75141	0.00030475	405.56510136906576	61.167	0.87137	61.268	60.446	61.317	0.10082					82	40	3	0	0	0	0.72918	1	5293	5293		23.378	6.8481	1	1002300			27086	6750	18270	18280	30789	30789					0.0723854322866373
LGIPLDQVNFV	11	Unmodified	_LGIPLDQVNFV_					0	0	0		nc|ENSG00000172197|Q6ZNC8-3|MBOAT1;ENSG00000172197|ENST00000324607|MBOAT1	nc|ENSG00000172197|Q6ZNC8-3|MBOAT1	nc|ENSG00000172197|Q6ZNC8-3|MBOAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5643310546875	3	405.564168	1213.67067	-1.8603	-0.00075448	3.3649	0.0013647	1.5046	0.00061022	405.5653949658049	63.143	1.4987	63.257	62.721	64.22	0.11388					139	74	3	0	0	0	0.72918	1	5547	5547		23.378	0.81632	1	273590			27087	6750	18270	18280	30790	30790					0.0723854322866373
LGIPSFLP	8	Unmodified	_LGIPSFLP_					0	0	0		ENST00000238256.7_1_9:115983537-115983633:-|nuORF	ENST00000238256.7_1_9:115983537-115983633:-|nuORF	ENST00000238256.7_1_9:115983537-115983633:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2408752441406	2	422.252372	842.49019	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.192	1	74.235	73.735	74.735	0.0429								0	0	0	0.29353	1	7089	7089		28.254	3.7503	1				27088	9241	18271	18281	30791	30791					0.06264489362479253
LGIQLSTRLTG	11	Unmodified	_LGIQLSTRLTG_					0	0	0			REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF	REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	579.8441772460938	2	579.845687	1157.67682	0.88069	0.00051066	-3.7088	-0.0021505	-2.8281	-0.0016399	579.843435527032	102.18	1.0887	102.31	101.93	103.02	0.13523					81	26	4	0	0	0	0.7434	1	10712	10712		23.523	0	1	2076300	+		27089	27791	18272	18282	30792	30792					0.10429061460149569
LGIQPWFA	8	Unmodified	_LGIQPWFA_					0	0	0		MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|55|1|anti-sense	MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|55|1|anti-sense	MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|55|1|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2525939941406	2	466.255446	930.496338	-0.11965	-5.5788E-05	-3.6671	-0.0017098	-3.7867	-0.0017656	466.2536537931843	61.171	1.1863	61.159	60.038	61.224	-0.012203					48	38	2	0	0	0	0.90024	1	5655	5655		39.021	8.5179	1	281870			27090	14725	18273	18283	30793	30793					0.028310075939884882
LGIRIRVPVE	10	Unmodified	_LGIRIRVPVE_					0	0	0			REV__ENSG00000101890|ENST00000218006|GUCY2F;REV__ENSG00000132518|ENST00000254854|GUCY2D	REV__ENSG00000132518|ENST00000254854|GUCY2D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	576.368896484375	2	576.36659	1150.71863	-0.60638	-0.0003495	4.2101	0.0024266	3.6038	0.0020771	576.3688060228938	43.511	1.939	43.485	41.995	43.934	-0.026764					106	46	3	0	0	0	0.85466	1	3209	3209		20.947	4.4738	1	251900	+		27091	17309;19009	18274	18284	30794	30794					0.14929661939368088
LGISIFTT	8	Unmodified	_LGISIFTT_					0	0	0		ENST00000555056.1_1_14:94770757-94780257:-|nuORF	ENST00000555056.1_1_14:94770757-94780257:-|nuORF	ENST00000555056.1_1_14:94770757-94780257:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	426.24566650390625	2	426.247286	850.48002	-1.1835	-0.00050446	-1.6997	-0.0007245	-2.8832	-0.001229	426.24646575286147	87.846	4.0837	87.846	85.783	89.866	0					184	94	2	0	0	0	0.86288	1	8395	8395		26.796	5.0938	1	2605100			27092	13728	18275	18285	30795	30795					0.04879881637236849
LGISIFTT	8	Unmodified	_LGISIFTT_					0	0	0		ENST00000555056.1_1_14:94770757-94780257:-|nuORF	ENST00000555056.1_1_14:94770757-94780257:-|nuORF	ENST00000555056.1_1_14:94770757-94780257:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.2458801269531	2	426.247286	850.48002	1.0559	0.00045007	-3.9444	-0.0016813	-2.8885	-0.0012312	426.2455229557475	87.647	3.9379	87.573	85.625	89.563	-0.074005					153	92	2	0	0	0	0.79929	1	9044	9044		18.324	2.6882	1	4306400			27093	13728	18275	18285	30796	30796					0.04879881637236849
LGISIFTT	8	Unmodified	_LGISIFTT_					0	0	0		ENST00000555056.1_1_14:94770757-94780257:-|nuORF	ENST00000555056.1_1_14:94770757-94780257:-|nuORF	ENST00000555056.1_1_14:94770757-94780257:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.2460632324219	2	426.247286	850.48002	0.61593	0.00026254	-3.4632	-0.0014762	-2.8473	-0.0012137	426.24572360202285	87.518	4.0945	87.668	85.602	89.696	0.14956					180	96	4	0	0	0	0.884	2	8620	8620;8704		33.516	8.0654	1	3688500			27094	13728	18275	18285	30797;30798	30797					0.04879881637236849
LGISIFTT	8	Unmodified	_LGISIFTT_					0	0	0		ENST00000555056.1_1_14:94770757-94780257:-|nuORF	ENST00000555056.1_1_14:94770757-94780257:-|nuORF	ENST00000555056.1_1_14:94770757-94780257:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.2460632324219	2	426.247286	850.48002	-1.843	-0.00078557	-1.0037	-0.00042784	-2.8467	-0.0012134	426.2467741737408	87.495	4.0009	87.665	85.686	89.687	0.16922					180	93	4	0	0	0	0.80706	1	8620	8620		19.36	0	1	3180100			27095	13728	18275	18285	30799	30799					0.04879881637236849
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7886962890625	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.7932	1	2652	2652		25.45	0	1	1012300			27096	15037	18276	18286	30800	30800					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7902526855469	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.7932	1	2853	2853		25.45	0	1	759950			27097	15037	18276	18286	30801	30801					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.79083251953125	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.76996	1	3903	3903		33.516	0	1	186860			27098	15037	18276	18286	30802	30802					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79315185546875	2	456.791861	911.569169	-0.042653	-1.9484E-05	2.8269	0.0012913	2.7842	0.0012718	456.79307389883803	36.432	2.1584	36.413	35.42	37.578	-0.018673					171	47	5	0	0	0	0.39977	1	2428	2428		57.811	0	1	4460800			27099	15037	18276	18286	30803	30803					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79180908203125	2	456.791861	911.569169	0.18235	8.3295E-05	0.58937	0.00026922	0.77171	0.00035251	456.79200220887	40.258	1.2138	40.227	39.65	40.864	-0.030987					94	32	4	0	0	0	0.76996	1	2902	2902		33.516	0	1	1159000			27100	15037	18276	18286	30804	30804					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.792236328125	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.77546	3	3159	3159;3227;3250		31.955	1.2474	1	608260			27101	15037	18276	18286	30805;30806;30807	30805					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7914123535156	2	456.791861	911.569169	0.05486	2.506E-05	2.6152	0.0011946	2.6701	0.0012197	456.79295826454774	49.784	2.1713	49.788	48.709	50.88	0.0035973					85	53	2	0	0	0	0.7932	1	4309	4309		19.36	1.0356	1	208660			27102	15037	18276	18286	30808	30808					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79290771484375	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.7932	1	2367	2367		18.324	0	1	1834900			27103	15037	18276	18286	30809	30809					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.791748046875	2	456.791861	911.569169	-1.2485	-0.0005703	3.083	0.0014083	1.8345	0.000838	456.7931433333729	40.143	1.4449	40.149	39.563	41.008	0.0065041					84	46	2	0	0	0	0.7932	1	2501	2501		18.324	0	1	1011500			27104	15037	18276	18286	30810	30810					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79107666015625	2	456.791861	911.569169	-1.2455	-0.00056893	2.9854	0.0013637	1.7399	0.00079477	456.79309475807366	41.513	1.1362	41.517	40.891	42.027	0.0043983					69	33	3	0	0	0	0.7932	1	2772	2772		25.45	1.2474	1	293920			27105	15037	18276	18286	30811	30811					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7923583984375	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.5393	2	2901	2901;2910		50.025	1.647	1	548640			27106	15037	18276	18286	30812;30813	30812					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.793212890625	2	456.791861	911.569169	0.17991	8.2183E-05	2.7362	0.0012499	2.9161	0.001332	456.7930101461281	36.153	2.2506	36.256	35.136	37.386	0.10306					210	68	4	0	0	0	0.7932	1	1919	1919		18.324	0	1	3531000			27107	15037	18276	18286	30814	30814					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7916564941406	2	456.791861	911.569169	0.23747	0.00010847	2.1705	0.00099146	2.408	0.0010999	456.79269786067573	42.365	2.4539	42.43	41.781	44.235	0.065037					168	63	3	0	0	0	0.7932	2	2821	2821;2880		25.45	4.9683	1	556840			27108	15037	18276	18286	30815;30816	30815					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7912902832031	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.67235	2	2811	2790;2811		42.474	5.446	1	605230			27109	15037	18276	18286	30817;30818	30818					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7897644042969	2	456.791861	911.569169	-0.27328	-0.00012483	2.9008	0.0013251	2.6275	0.0012002	456.79291204486344	46.231	0.96013	46.152	45.759	46.72	-0.079002					46	26	3	0	0	0	0.7932	1	3378	3378		25.45	0	1	152910			27110	15037	18276	18286	30819	30819					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79248046875	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.196	1	38.138	37.638	38.638	-0.057915								0	0	0	0.31472	1	2242	2242		25.45	0	1				27111	15037	18276	18286	30820	30820					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7922058105469	2	456.791861	911.569169	-0.5708	-0.00026074	3.3989	0.0015526	2.8281	0.0012919	456.79332762585267	37.831	1.4155	38.144	37.663	39.079	0.31312					135	35	5	0	0	0	0.7932	1	3166	3166		18.324	0.95945	1	9282000			27112	15037	18276	18286	30821	30821					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79248046875	2	456.791861	911.569169	0.14837	6.7774E-05	2.6615	0.0012157	2.8099	0.0012835	456.79297860960025	37.636	1.5872	38.122	37.704	39.291	0.48581					149	39	5	0	0	0	0.7932	1	3167	3167		24.203	0	1	8942200			27113	15037	18276	18286	30822	30822					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7925109863281	2	456.791861	911.569169	-1.4135	-0.00064567	2.5195	0.0011509	1.106	0.00050522	456.7928761630725	39.835	2.0275	40.401	39.33	41.358	0.56588					154	50	4	0	0	0	0.77546	1	3291	3291		31.955	0	1	4024400			27114	15037	18276	18286	30823	30823					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7914123535156	2	456.791861	911.569169	-1.6737	-0.00076455	2.8822	0.0013166	1.2085	0.00055202	456.79302395455574	41.288	2.2955	41.922	41.391	43.687	0.6339					167	59	4	0	0	0	0.7932	1	3712	3712		25.45	1.2474	1	9370200			27115	15037	18276	18286	30824	30824					0.10984716596760791
LGISLTVIP	9	Unmodified	_LGISLTVIP_					0	0	0		nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-2|RALGDS	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	456.791861	911.569169	-1.917	-0.00087568	4.7022	0.0021479	2.7852	0.0012723	456.7939052623153	36.272	2.0785	36.272	35.184	37.263	0	-0.080938	0.0011074	NaN	57.811	166	50	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4123700			27116	15037	18276	18286							0.10984716596760791
LGITALHIKLR	11	Unmodified	_LGITALHIKLR_					0	0	0		ENSG00000164587|ENST00000407193|RPS14	ENSG00000164587|ENST00000407193|RPS14	ENSG00000164587|ENST00000407193|RPS14	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76629638671875	3	412.271319	1233.79213	0.21471	8.852E-05	3.9564	0.0016311	4.1711	0.0017196	412.6072967207508	42.992	1.3384	43.057	42.723	44.061	0.065037					50	33	2	0	0	0	0.1745	1	3009	3009		23.378	17.679	1	146210			27117	5976	18277	18287	30825	30825					0.18458210381822937
LGITLHNTRKI	11	Unmodified	_LGITLHNTRKI_					0	0	0		ENST00000299204.4_1_14:104025759-104025864:-|nuORF	ENST00000299204.4_1_14:104025759-104025864:-|nuORF	ENST00000299204.4_1_14:104025759-104025864:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5924377441406	3	422.594461	1264.76155	-0.015219	-6.4315E-06	-4.1372	-0.0017484	-4.1524	-0.0017548	422.5925783921211	58.971	2.9474	58.94	58.062	61.01	-0.030884					151	84	3	0	0	0	0.71207	1	5479	5479		29.551	5.3189	1	166800			27118	9779	18278	18288	30826	30826					0.13976431996798055
LGITLWPL	8	Unmodified	_LGITLWPL_					0	0	0		nc|ENSG00000170190|O15375-2|SLC16A5;ENSG00000170190|ENST00000329783|SLC16A5	nc|ENSG00000170190|O15375-2|SLC16A5	nc|ENSG00000170190|O15375-2|SLC16A5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7930603027344	2	456.781296	911.54804	-1.1408	-0.00052112	-2.2794	-0.0010412	-3.4202	-0.0015623	456.78067246122004	36.816	0.40349	36.827	36.614	37.017	0.011177					9	8	2	0	0	0	0.4196	1	2418	2418		29.842	0	1	35587			27119	6565	18279	18289	30827	30827					0.08872751287890424
LGIVALTPK	9	Unmodified	_LGIVALTPK_					0	0	0			REV__nc|ENSG00000293458|O60774|FMO6P	REV__nc|ENSG00000293458|O60774|FMO6P	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30108642578125	2	456.299853	910.585153	-1.821	-0.00083093	3.591	0.0016386	1.77	0.00080766	456.3013684368404	43.078	1.5972	43.078	42.644	44.241	0					105	38	3	0	0	0	0.78058	2	3038	3026;3038		30.504	2.3535	1	1086200	+		27120	30309	18280	18290	30828;30829	30829					0.12628422833643071
LGIVALTPK	9	Unmodified	_LGIVALTPK_					0	0	0			REV__nc|ENSG00000293458|O60774|FMO6P	REV__nc|ENSG00000293458|O60774|FMO6P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30096435546875	2	456.299853	910.585153	0.17352	7.9178E-05	1.8885	0.00086173	2.062	0.00094091	456.30054777495894	45.254	1.9566	45.236	44.141	46.098	-0.018585					90	45	3	0	0	0	0.78058	1	3572	3572		30.504	3.7075	1	417410	+		27121	30309	18280	18290	30830	30830					0.12628422833643071
LGIVALTPK	9	Unmodified	_LGIVALTPK_					0	0	0			REV__nc|ENSG00000293458|O60774|FMO6P	REV__nc|ENSG00000293458|O60774|FMO6P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3013610839844	2	456.299853	910.585153	-0.68927	-0.00031451	3.5345	0.0016128	2.8453	0.0012983	456.30128778001557	35.219	1.6098	35.163	34.768	36.378	-0.056385					101	36	5	0	0	0	0.77546	1	2303	2303		31.955	1.4512	1	710350	+		27122	30309	18280	18290	30831	30831					0.12628422833643071
LGIVALTPK	9	Unmodified	_LGIVALTPK_					0	0	0			REV__nc|ENSG00000293458|O60774|FMO6P	REV__nc|ENSG00000293458|O60774|FMO6P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30047607421875	2	456.299853	910.585153	-0.95599	-0.00043622	2.965	0.0013529	2.009	0.00091669	456.30107129124815	45.178	1.6921	45.147	44.106	45.798	-0.031067					86	38	3	0	0	0	0.78536	1	3666	3666		29.15	2.3535	1	476180	+		27123	30309	18280	18290	30832	30832					0.12628422833643071
LGIVALTPK	9	Unmodified	_LGIVALTPK_					0	0	0			REV__nc|ENSG00000293458|O60774|FMO6P	REV__nc|ENSG00000293458|O60774|FMO6P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.300537109375	2	456.299853	910.585153	-0.23513	-0.00010729	2.1872	0.000998	1.952	0.00089071	456.3007121817001	45.145	1.6994	45.141	44.498	46.198	-0.0041618					86	39	3	0	0	0	0.78058	1	3562	3562		30.504	1.3541	1	438290	+		27124	30309	18280	18290	30833	30833					0.12628422833643071
LGIVALTPK	9	Unmodified	_LGIVALTPK_					0	0	0			REV__nc|ENSG00000293458|O60774|FMO6P	REV__nc|ENSG00000293458|O60774|FMO6P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3009948730469	2	456.299853	910.585153	-1.2433	-0.00056734	3.7269	0.0017006	2.4835	0.0011332	456.3014230602223	46.4	1.7062	46.416	45.86	47.566	0.015514					104	48	3	0	0	0	0.78983	2	3430	3407;3430		27.882	3.6795	1	349560	+		27125	30309	18280	18290	30834;30835	30835					0.12628422833643071
LGIVGPVLT	9	Unmodified	_LGIVGPVLT_					0	0	0		nc|ENSG00000123415|Q53HV7-2|SMUG1;ENSG00000123415|ENST00000682136|SMUG1	nc|ENSG00000123415|Q53HV7-2|SMUG1	nc|ENSG00000123415|Q53HV7-2|SMUG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801208496094	2	434.778754	867.542954	-0.14252	-6.1964E-05	3.501	0.0015222	3.3585	0.0014602	434.78017454908985	35.066	1.262	35.054	34.849	36.111	-0.012203					110	29	4	0	0	0	0.76996	1	2182	2182		33.516	5.2613	1	2804500			27126	3272	18281	18291	30836	30836					0.10388447425270897
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3611450195312	2	526.359911	1050.70527	-1.5421	-0.00081169	4.0218	0.0021169	2.4797	0.0013052	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.85939	1	2193	2193		23.042	0	1	788470			27127	3134	18282	18292	30837	30837					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3612060546875	2	526.359911	1050.70527	0.086645	4.5607E-05	2.1771	0.0011459	2.2637	0.0011915	526.3609236587663	33.368	2.0596	33.371	32.762	34.822	0.0030785					171	48	5	0	0	0	0.86201	1	1939	1939		24.203	0	1	3096800			27128	3134	18282	18292	30838	30838					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3611450195312	2	526.359911	1050.70527	0.054232	2.8545E-05	1.9819	0.0010432	2.0362	0.0010718	526.3608595612541	33.548	1.6551	33.491	33.113	34.768	-0.056385					153	37	5	0	0	0	0.86201	1	2111	2111		24.203	0	1	7840300			27129	3134	18282	18292	30839	30839					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3610229492188	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.86452	1	2314	2314		30.504	7.4612	1	2871800			27130	3134	18282	18292	30840	30840					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3609619140625	2	526.359911	1050.70527	-0.46682	-0.00024572	2.8843	0.0015182	2.4174	0.0012724	526.3612792747932	37.192	2.9497	37.138	36.203	39.152	-0.053555					173	66	5	0	0	0	0.85939	2	2507	2507;2531		27.882	5.6775	1	2681300			27131	3134	18282	18292	30841;30842	30841					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3610229492188	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.86589	1	2473	2473		29.15	6.1071	1	2706400			27132	3134	18282	18292	30843	30843					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3615112304688	2	526.359911	1050.70527	-0.23001	-0.00012107	2.5809	0.0013585	2.3509	0.0012374	526.3611422284945	33.372	1.4852	33.418	33.076	34.561	0.045849					221	65	5	0	0	0	0.8488	1	1680	1680		17.365	0	1	5657100			27133	3134	18282	18292	30844	30844					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3597412109375	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.84874	1	1951	1951		18.324	0.95945	1	1497200			27134	3134	18282	18292	30845	30845					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.361083984375	2	526.359911	1050.70527	-0.2233	-0.00011753	2.7139	0.0014285	2.4906	0.0013109	526.3612023516472	37.188	2.125	37.212	36.022	38.147	0.023624					163	60	4	0	0	0	0.8488	3	2143	1974;2086;2143		17.365	0	1	1504200			27135	3134	18282	18292	30846;30847;30848	30848					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3609619140625	2	526.359911	1050.70527	0.23622	0.00012434	2.2547	0.0011868	2.4909	0.0013111	526.3609415708197	35.175	1.5308	35.281	34.617	36.148	0.10604					147	55	3	0	0	0	0.85939	2	1823	1814;1823		29.15	4.9468	1	1065400			27136	3134	18282	18292	30849;30850	30850					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3612670898438	2	526.359911	1050.70527	0.25296	0.00013315	2.2538	0.0011863	2.5068	0.0013195	526.3609378895691	36.94	1.9118	37.039	36.051	37.962	0.099277					159	60	4	0	0	0	0.85939	1	2101	2101		23.042	1.0826	1	1522000			27137	3134	18282	18292	30851	30851					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3612060546875	2	526.359911	1050.70527	0.41493	0.0002184	1.9977	0.0010515	2.4127	0.0012699	526.3608149931753	33.292	1.7707	33.259	32.845	34.615	-0.032677					246	76	5	0	0	0	0.85939	2	1620	1568;1620		25.45	1.2474	1	5110100			27138	3134	18282	18292	30852;30853	30853					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3600463867188	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.85939	1	1892	1892		23.042	5.6775	1	1221500			27139	3134	18282	18292	30854	30854					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3612060546875	2	526.359911	1050.70527	0.28216	0.00014852	2.2187	0.0011678	2.5009	0.0013164	526.3609172298998	37.04	1.8045	36.98	36.127	37.931	-0.060337					149	55	4	0	0	0	0.86452	1	2099	2099		30.504	0	1	1903200			27140	3134	18282	18292	30855	30855					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.36083984375	2	526.359911	1050.70527	1.057	0.00055634	1.5103	0.00079494	2.5672	0.0013513	526.3605624063631	36.088	1.9344	36.37	35.78	37.714	0.28173					146	47	5	0	0	0	0.86589	1	2822	2822		29.15	4.9468	1	5773200			27141	3134	18282	18292	30856	30856					0.18194411107424457
LGIVITPLLL	10	Unmodified	_LGIVITPLLL_					0	0	0		nc|ENSG00000120519|Q0GE19-4|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.361083984375	2	526.359911	1050.70527	1.6664	0.00087713	0.82322	0.00043331	2.4896	0.0013104	526.3602142312507	35.988	1.9361	36.429	35.808	37.744	0.44043					142	47	4	0	0	0	0.86589	1	2810	2810		29.15	3.6994	1	6841400			27142	3134	18282	18292	30857	30857					0.18194411107424457
LGIVLQGPA	9	Unmodified	_LGIVLQGPA_					0	0	0		ENST00000506669.1_1_4:946199-949276:+|nuORF;ENST00000515876.5_1_4:941527-949679:+|nuORF;ENST00000452360.6_1_4:942397-950358:+|nuORF;nc|ENSG00000127419|Q9BSA9-2|TMEM175;ENSG00000127419|ENST00000264771|TMEM175	ENST00000506669.1_1_4:946199-949276:+|nuORF	ENST00000506669.1_1_4:946199-949276:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7803039550781	2	434.268553	866.522553	0.47787	0.00020752	1.3688	0.00059444	1.8467	0.00080196	434.2700462606577	34.444	0.45247	34.654	34.359	34.812	0.21003					14	10	2	0	0	0	0.20789	1	2563	2563		33.516	0	1	135830			27143	3497	18283	18293	30858	30858					0.08395276765475046
LGIVMLKRIHS	11	Unmodified	_LGIVMLKRIHS_					0	0	0		ENST00000490999.5_1_1:155226066-155230310:-|nuORF;nc|ENSG00000116521|O14828-2|SCAMP3;ENSG00000116521|ENST00000302631|SCAMP3	ENST00000490999.5_1_1:155226066-155230310:-|nuORF	ENST00000490999.5_1_1:155226066-155230310:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.9267272949219	3	422.928676	1265.7642	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.848	1	55.848	55.348	56.348	0								0	0	0	0.56276	1	4761	4761		24.232	4.9691	1				27144	2922	18284	18294	30859	30859					0.14194564130116305
LGIVTPGIV	9	Unmodified	_LGIVTPGIV_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22;chr15:75914205-75917349|13|10.92|0.11|6.63|+|2|FBXO22,None|1	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78070068359375	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.939	1	54.932	54.432	55.432	-0.0077095								0	0	0	0.31472	1	4868	4868		25.45	1.2474	1				27145	6275	18285	18295	30860	30860					0.10388447425282266
LGIVTPGIV	9	Unmodified	_LGIVTPGIV_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22;chr15:75914205-75917349|13|10.92|0.11|6.63|+|2|FBXO22,None|1	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7804260253906	2	434.778754	867.542954	-0.52026	-0.0002262	3.3297	0.0014477	2.8095	0.0012215	434.78008033903114	55.345	1.972	55.318	54.208	56.18	-0.027275					116	58	3	0	0	0	0.7932	1	5000	5000		26.796	0	1	290730			27146	6275	18285	18295	30861	30861					0.10388447425282266
LGIVTPGIV	9	Unmodified	_LGIVTPGIV_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22;chr15:75914205-75917349|13|10.92|0.11|6.63|+|2|FBXO22,None|1	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7790222167969	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.7932	1	3589	3589		25.45	1.2474	1	1986600			27147	6275	18285	18295	30862	30862					0.10388447425282266
LGIVTPGIV	9	Unmodified	_LGIVTPGIV_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22;chr15:75914205-75917349|13|10.92|0.11|6.63|+|2|FBXO22,None|1	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77996826171875	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.7932	1	3553	3553		25.45	4.9683	1	2833200			27148	6275	18285	18295	30863	30863					0.10388447425282266
LGIVTPGIV	9	Unmodified	_LGIVTPGIV_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22;chr15:75914205-75917349|13|10.92|0.11|6.63|+|2|FBXO22,None|1	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.67235	1	3214	3214		42.474	1.9018	1	15771000			27149	6275	18285	18295	30864	30864					0.10388447425282266
LGKAACYAH	9	Unmodified	_LGKAACYAH_					0	0	0		ENST00000485069.1_1_2:220336438-220336879:+|nuORF;nc|ENSG00000072195|Q15772-1|SPEG;ENSG00000072195|ENST00000312358|SPEG	ENST00000485069.1_1_2:220336438-220336879:+|nuORF;nc|ENSG00000072195|Q15772-1|SPEG	ENST00000485069.1_1_2:220336438-220336879:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.2335205078125	2	467.234187	932.453822	-1.0177	-0.00047551	-0.85147	-0.00039784	-1.8692	-0.00087334	467.2337824408168	68.11	1.4648	68.17	67.783	69.248	0.059288					157	61	4	0	0	0	0.76996	1	6072	6072		33.516	4.366	1	2841300			27150	12547;1271	18286	18296	30865	30865					-0.015107108059055463
LGKAIRGKIA	10	Unmodified	_LGKAIRGKIA_					0	0	0		ENST00000527257.1_1_11:124971961-124972228:-|nuORF	ENST00000527257.1_1_11:124971961-124972228:-|nuORF	ENST00000527257.1_1_11:124971961-124972228:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8428955078125	2	513.842751	1025.67095	0.38457	0.00019761	-0.40979	-0.00021057	-0.025219	-1.2959E-05	513.842510250407	21.529	0.48262	21.465	21.287	21.77	-0.064058					31	18	2	0	0	0	0.77314	1	607	607		40.778	3.6191	1	70537			27151	13279	18287	18297	30866	30866					0.15914007739161207
LGKGKMSV	8	Unmodified	_LGKGKMSV_					0	0	0		ENST00000357055.7_1_2:32446577-32446703:+|nuORF	ENST00000357055.7_1_2:32446577-32446703:+|nuORF	ENST00000357055.7_1_2:32446577-32446703:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	410.2423400878906	2	410.241481	818.468409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.209	1	15.61	15.11	16.11	-0.59873								0	0	0	0.29703	1	102	102		37.159	3.6435	1				27152	10378	18288	18298	30867	30867					0.051913613422584604
LGKHEDRSTYP	11	Unmodified	_LGKHEDRSTYP_					0	0	0		ENST00000457356.8_1_8:72965957-72966179:+|nuORF	ENST00000457356.8_1_8:72965957-72966179:+|nuORF	ENST00000457356.8_1_8:72965957-72966179:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.88555908203125	3	434.886081	1301.63641	1.2474	0.00054247	-0.057779	-2.5127E-05	1.1896	0.00051734	434.8864034061584	28.33	0.43071	28.157	27.934	28.365	-0.17336					26	10	3	0	0	0	0.64964	1	1716	1716		38.714	3.5359	1	141270			27153	11979	18289	18299	30868	30868					-0.002339049302463536
LGKHEDRSTYP	11	Unmodified	_LGKHEDRSTYP_					0	0	0		ENST00000457356.8_1_8:72965957-72966179:+|nuORF	ENST00000457356.8_1_8:72965957-72966179:+|nuORF	ENST00000457356.8_1_8:72965957-72966179:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	434.886081	1301.63641	-0.82415	-0.00035841	2.0111	0.00087458	1.1869	0.00051617	434.8872435327256	28.163	0.52786	28.066	27.885	28.413	-0.096947	-0.045458	0.0013376	NaN	38.714	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138640			27154	11979	18289	18299							-0.002339049302463536
LGKHLYWIDRQ	11	Unmodified	_LGKHLYWIDRQ_					0	0	0		ENST00000529993.5_1_11:68171724-68216535:+|nuORF;ENSG00000162337|ENST00000294304|LRP5	ENST00000529993.5_1_11:68171724-68216535:+|nuORF	ENST00000529993.5_1_11:68171724-68216535:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.9259033203125	3	476.929733	1427.76737	-1.861	-0.00088758	-2.0897	-0.00099665	-3.9508	-0.0018842	476.9284890354769	33.006	0.49501	33.006	32.798	33.293	0					32	21	2	0	0	0	0.77205	1	1667	1667		17.167	0	1	53530			27155	5678	18290	18300	30869	30869					0.07059530508445278
LGKKIVKP	8	Unmodified	_LGKKIVKP_					0	0	0			REV__ENST00000532085.1_1_11:118896547-118896784:-|nuORF	REV__ENST00000532085.1_1_11:118896547-118896784:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.8083190917969	2	441.810388	881.606223	0.23762	0.00010498	-3.2652	-0.0014426	-3.0275	-0.0013376	441.80895009460005	19.294	0.77876	18.824	18.524	19.303	-0.46967					22	16	2	0	0	0	0.86288	1	505	505		26.796	6.3143	1	136750	+		27156	28317	18291	18301	30870	30870					0.16068432933172971
LGKKIVKP	8	Unmodified	_LGKKIVKP_					0	0	0			REV__ENST00000532085.1_1_11:118896547-118896784:-|nuORF	REV__ENST00000532085.1_1_11:118896547-118896784:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	441.810388	881.606223	-2.164	-0.0009561	-0.73438	-0.00032446	-2.8984	-0.0012806	441.80997266842684	18.641	0.46674	18.641	18.488	18.954	0	-0.055686	0.0016335	NaN	26.796	21	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35688	+		27157	28317	18291	18301							0.16068432933172971
LGKKIVKP	8	Unmodified	_LGKKIVKP_					0	0	0			REV__ENST00000532085.1_1_11:118896547-118896784:-|nuORF	REV__ENST00000532085.1_1_11:118896547-118896784:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	441.810388	881.606223	-1.5436	-0.00068199	-1.0143	-0.00044813	-2.5579	-0.0011301	441.8098728248621	18.581	0.16874	18.625	18.539	18.708	0.044048	-0.071976	0.0013861	NaN	26.796	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43938	+		27158	28317	18291	18301							0.16068432933172971
LGKKKKAP	8	Unmodified	_LGKKKKAP_					0	0	0			REV__nc|ENSG00000122966|O14578|CIT	REV__nc|ENSG00000122966|O14578|CIT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.30023193359375	2	435.300188	868.585822	-0.33292	-0.00014492	0.65367	0.00028454	0.32075	0.00013962	435.30030600334584	75.563	1.7203	75.517	74.991	76.711	-0.045975					102	48	3	0	0	0	0.85787	1	7456	7456		9.4706	0	1	492420	+		27159	18521	18292	18302	30871	30871					0.14627262273359065
LGKLFKPFLM	10	Unmodified	_LGKLFKPFLM_					0	0	0			REV__nc|ENSG00000140688|Q96GQ5-2|RUSF1	REV__nc|ENSG00000140688|Q96GQ5-2|RUSF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.3578491210938	2	597.359388	1192.70422	-1.2979	-0.00077532	-0.94196	-0.00056269	-2.2399	-0.001338	597.3583970456502	100.18	2.7493	100.35	98.666	101.42	0.17199					156	64	4	0	0	0	0.86218	1	10459	10459		32.812	10.853	1	2737400	+		27160	19637	18293	18303	30872	30872					0.11557873466858837
LGKLFKRFAS	10	Unmodified	_LGKLFKRFAS_					0	0	0			REV__ENST00000557054.1_1_14:20923524-20925664:+|nuORF	REV__ENST00000557054.1_1_14:20923524-20925664:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	583.858154296875	2	583.855858	1165.69716	0.74065	0.00043243	4.4224	0.002582	5.163	0.0030145	583.8582354915881	98.447	2.0436	98.675	98.127	100.17	0.22788					107	47	4	0	0	0	0.8486	1	10194	10194		18.262	0.79408	1	1023000	+		27161	28711	18294	18304	30873	30873					0.1209427691064775
LGKPKKAK	8	Unmodified	_LGKPKKAK_					0	0	0			REV__ENSG00000111145|ENST00000228741|ELK3	REV__ENSG00000111145|ENST00000228741|ELK3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.30023193359375	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.84191	1	6548	6548		11.511	2.0405	1	1072400	+		27162	17851	18295	18305	30874	30874					0.14627262273359065
LGKPKKAK	8	Unmodified	_LGKPKKAK_					0	0	0			REV__ENSG00000111145|ENST00000228741|ELK3	REV__ENSG00000111145|ENST00000228741|ELK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3001708984375	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.83058	1	6858	6858		12.959	0	1	1680500	+		27163	17851	18295	18305	30875	30875					0.14627262273359065
LGKPKKAK	8	Unmodified	_LGKPKKAK_					0	0	0			REV__ENSG00000111145|ENST00000228741|ELK3	REV__ENSG00000111145|ENST00000228741|ELK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30010986328125	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.82419	1	6939	6939		13.775	4.3048	1	1921500	+		27164	17851	18295	18305	30876	30876					0.14627262273359065
LGKPKKAK	8	Unmodified	_LGKPKKAK_					0	0	0			REV__ENSG00000111145|ENST00000228741|ELK3	REV__ENSG00000111145|ENST00000228741|ELK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3003845214844	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.86294	1	8053	8053		8.8223	0	1	6323600	+		27165	17851	18295	18305	30877	30877					0.14627262273359065
LGKQCRERWH	10	Unmodified	_LGKQCRERWH_					0	0	0		nc|ENSG00000101057|P10244-2|MYBL2;ENSG00000101057|ENST00000217026|MYBL2	nc|ENSG00000101057|P10244-2|MYBL2	nc|ENSG00000101057|P10244-2|MYBL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2310791015625	3	438.227896	1311.66186	1.1558	0.0005065	4.0983	0.001796	5.2541	0.0023025	438.2296157874905	28.42	0.82828	28.247	27.846	28.674	-0.17336					56	20	4	0	0	0	0.83456	1	1715	1715		37.508	0	1	583210			27166	1895	18296	18306	30878	30878					0.018492911111934518
LGKQQPKC	8	Unmodified	_LGKQQPKC_					0	0	0			REV__nc|ENSG00000100298|Q6NTF7-4|APOBEC3H	REV__nc|ENSG00000100298|Q6NTF7-4|APOBEC3H	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2507629394531	2	451.249837	900.485122	-1.5029	-0.0006782	-0.52106	-0.00023513	-2.024	-0.00091333	451.24948444631724	65.955	1.2112	65.955	65.412	66.623	0					127	65	2	0	0	0	0.86288	1	5850	5850		26.796	1.3459	1	815400	+		27167	17164	18297	18307	30879	30879					0.0308986222820522
LGKRKVRK	8	Unmodified	_LGKRKVRK_					0	0	0			REV__ENST00000505303.5_1_5:110428043-110447004:+|nuORF	REV__ENST00000505303.5_1_5:110428043-110447004:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.8371887207031	2	492.843085	983.671617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.26	1	114.36	113.86	114.86	0.098114								0	0	0	0.30884	1	12231	12231		13.775	0	1		+		27168	19181	18298	18308	30880	30880					0.1791284717888857
LGKRPTKDS	9	Unmodified	_LGKRPTKDS_					0	0	0		nc|ENSG00000105695|P20916-3|MAG;ENSG00000105695|ENST00000392213|MAG;ENST00000361922.8_1_19:35803216-35804354:+|nuORF	nc|ENSG00000105695|P20916-3|MAG	nc|ENSG00000105695|P20916-3|MAG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2902526855469	2	501.290548	1000.56654	0.65622	0.00032896	-1.0593	-0.000531	-0.40304	-0.00020204	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.77244	1	8331	8331		32.812	2.4947	1	2931000			27169	2242	18299	18309	30881	30881					0.06628261191804086
LGKVFLIEVF	10	Unmodified	_LGKVFLIEVF_					0	0	0			REV__nc|ENSG00000181381|Q5H9U9-2|DDX60L	REV__nc|ENSG00000181381|Q5H9U9-2|DDX60L	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8556518554688	2	582.854993	1163.69543	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.58	1	114.55	114.05	115.05	-0.024452								0	0	0	0.45132	1	12697	12697		34.173	11.13	1		+		27170	22455	18300	18310	30882	30882					0.12013223102030679
LGKVHLAM	8	Unmodified	_LGKVHLAM_					0	0	0		ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.76019287109375	2	434.757298	867.500044	1.0426	0.00045328	2.9807	0.0012959	4.0233	0.0017492	434.7588689622068	87.637	3.2918	87.563	86.012	89.304	-0.073997					167	77	4	0	0	0	0.86791	1	9120	9120		28.254	1.4582	1	1572200			27171	2073	18301	18311	30883	30883					0.0609935409619311
LGKVHLAM	8	Unmodified	_LGKVHLAM_					0	0	0		ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.76007080078125	2	434.757298	867.500044	2.1234	0.00092316	2.0238	0.00087986	4.1472	0.001803	434.758413846185	87.485	3.2565	87.538	86.101	89.357	0.053024					140	76	4	0	0	0	0.86791	1	8977	8977		28.254	1.4582	1	1543500			27172	2073	18301	18311	30884	30884					0.0609935409619311
LGKVHLAM	8	Unmodified	_LGKVHLAM_					0	0	0		ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7598571777344	2	434.757298	867.500044	0.61638	0.00026798	3.1592	0.0013735	3.7756	0.0016415	434.7589702890546	87.554	3.2021	87.703	86.279	89.481	0.14956					123	75	2	0	0	0	0.86791	1	8648	8648		28.254	1.4582	1	1373100			27173	2073	18301	18311	30885	30885					0.0609935409619311
LGKVKKFAKVL	11	Unmodified	_LGKVKKFAKVL_					0	0	0			REV__ENST00000462088.1_1_3:40351432-40352571:+|nuORF	REV__ENST00000462088.1_1_3:40351432-40352571:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.9181518554688	2	615.918458	1229.82236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.462	1	50.491	49.991	50.991	0.029629								0	0	0	0.56276	1	3965	3965		14.137	0	1		+		27174	27043	18302	18312	30886	30886					0.21664569047015902
LGKVRLLP	8	Unmodified	_LGKVRLLP_					0	0	0		ENST00000602775.5_1_5:139929747-139930248:-|nuORF	ENST00000602775.5_1_5:139929747-139930248:-|nuORF	ENST00000602775.5_1_5:139929747-139930248:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3067321777344	2	448.308013	894.601472	0.077631	3.4803E-05	-2.7409	-0.0012288	-2.6633	-0.001194	448.3066399398086	21.099	1.9391	20.47	19.445	21.384	-0.62835					82	47	2	0	0	0	0.81548	1	761	761		20.482	4.8456	1	244290			27175	14414	18303	18313	30887	30887					0.14995548790420798
LGLAAAVLLA	10	Unmodified	_LGLAAAVLLA_					0	0	0			REV__nc|ENSG00000162804|Q8TER0-5|SNED1	REV__nc|ENSG00000162804|Q8TER0-5|SNED1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30126953125	2	456.299853	910.585153	-0.68927	-0.00031451	3.5345	0.0016128	2.8453	0.0012983	456.30128778001557	35.219	1.6098	35.163	34.768	36.378	-0.056385					101	36	5	0	0	0	0.85976	1	2322	2322		35.201	8.4046	1	710350	+		27176	20849	18304	18314	30888	30888					0.12628422833643071
LGLAAPLLT	9	Unmodified	_LGLAAPLLT_					0	0	0			REV__ENST00000531776.1_1_11:16812090-16812671:-|nuORF	REV__ENST00000531776.1_1_11:16812090-16812671:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.777099609375	2	434.778754	867.542954	-0.16786	-7.298E-05	3.2465	0.0014115	3.0786	0.0013385	434.78010256924983	60.312	3.0151	60.298	58.141	61.156	-0.013729					170	93	2	0	0	0	0.7932	1	5682	5682		24.203	3.7209	1	231370	+		27177	28309	18305	18315	30889	30889					0.10388447425270897
LGLAILLPA	9	Unmodified	_LGLAILLPA_					0	0	0			REV__ENSG00000196743|ENST00000357164|GM2A	REV__ENSG00000196743|ENST00000357164|GM2A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.2681884765625	2	440.796946	879.57934	-1.4877	-0.00065579	-1.4742	-0.00064983	-2.962	-0.0013056	440.7959920749372	60.877	0.35339	60.977	60.747	61.1	0.10082					20	13	2	0	0	0	0.20789	1	5281	5281		39.021	0	1	44790	+		27178	23168	18306	18316	30890	30890					0.13473324321978453
LGLALGPAL	9	Unmodified	_LGLALGPAL_					0	0	0		ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2674865722656	2	412.765646	823.516739	-1.3459	-0.00055553	3.4065	0.0014061	2.0606	0.00085056	412.76701040612045	40.372	1.7448	40.328	39.579	41.324	-0.043694					94	45	3	0	0	0	0.78292	1	2913	2913		29.842	0	1	625910			27179	1446	18307	18317	30891	30891					0.09792178253792372
LGLALGPAL	9	Unmodified	_LGLALGPAL_					0	0	0		ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7669372558594	2	412.765646	823.516739	1.2585	0.00051947	2.4286	0.0010024	3.6871	0.0015219	412.7665201070099	37.01	2.3211	37.292	35.703	38.024	0.28173					152	57	4	0	0	0	0.78292	1	2881	2881		29.842	0	1	3102100			27180	1446	18307	18317	30892	30892					0.09792178253792372
LGLALGPAL	9	Unmodified	_LGLALGPAL_					0	0	0		ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.76690673828125	2	412.765646	823.516739	1.2488	0.00051545	2.3587	0.00097359	3.6075	0.001489	412.7664969922496	36.891	1.9427	37.376	36.231	38.174	0.48581					136	47	4	0	0	0	0.78292	2	2877	2877;2901		29.842	0	1	3061300			27181	1446	18307	18317	30893;30894	30893					0.09792178253792372
LGLALPGLA	9	Unmodified	_LGLALPGLA_					0	0	0		ENSG00000168394|ENST00000354258|TAP1;nc|ENSG00000168394|Q03518-2|TAP1	ENSG00000168394|ENST00000354258|TAP1	ENSG00000168394|ENST00000354258|TAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7671203613281	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.78292	1	2223	2223		29.842	0	1	1649400			27182	6398	18308	18318	30895	30895					0.0979217825380374
LGLALPGLA	9	Unmodified	_LGLALPGLA_					0	0	0		ENSG00000168394|ENST00000354258|TAP1;nc|ENSG00000168394|Q03518-2|TAP1	ENSG00000168394|ENST00000354258|TAP1	ENSG00000168394|ENST00000354258|TAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2679443359375	2	412.765646	823.516739	0.29216	0.00012059	0.97906	0.00040412	1.2712	0.00052472	412.7669032783796	51.677	2.3681	51.737	50.932	53.3	0.059719					122	72	2	0	0	0	0.7932	1	4084	4084		21.702	0	1	250130			27183	6398	18308	18318	30896	30896					0.0979217825380374
LGLALRGVENE	11	Unmodified	_LGLALRGVENE_					0	0	0			REV__ENST00000525701.5_1_11:502236-507222:-|nuORF	REV__ENST00000525701.5_1_11:502236-507222:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.8551025390625	2	585.827495	1169.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.16	1	114.16	113.66	114.66	0								0	0	0	0.56276	1	11775	11775		14.137	1.1779	1		+		27184	28188	18309	18319	30897	30897					0.062401845634894926
LGLAPGLAL	9	Unmodified	_LGLAPGLAL_					0	0	0			REV__ENSG00000080573|ENST00000264828|COL5A3	REV__ENSG00000080573|ENST00000264828|COL5A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.26800537109375	2	412.765646	823.516739	-0.62558	-0.00025822	2.0435	0.0008435	1.4179	0.00058528	412.7673203899957	51.451	2.0511	51.366	50.837	52.888	-0.084538					105	61	2	0	0	0	0.78292	1	4116	4116		29.842	0	1	311840	+		27185	16806	18310	18320	30898	30898					0.09792178253792372
LGLARRLDS	9	Unmodified	_LGLARRLDS_					0	0	0		ENST00000395497.5_1_6:32145365-32145494:-|nuORF	ENST00000395497.5_1_6:32145365-32145494:-|nuORF	ENST00000395497.5_1_6:32145365-32145494:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.7975769042969	2	500.79854	999.582528	-0.20548	-0.00010291	0.93558	0.00046854	0.7301	0.00036563	500.79776973299846	94.355	2.1278	94.402	93.492	95.62	0.046173					87	50	4	0	0	0	0.78058	1	9961	9961		30.504	1.3541	1	522090			27186	11095	18311	18321	30899	30899					0.08271967428709104
LGLAVASCS	9	Unmodified	_LGLAVASCS_					0	0	0		ENSG00000183688|ENST00000329099|RFLNB;nc|ENSG00000183688|Q8N5W9|RFLNB	ENSG00000183688|ENST00000329099|RFLNB	ENSG00000183688|ENST00000329099|RFLNB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	410.7142028808594	2	410.715296	819.416039	-1.8627	-0.00076506	-2.07	-0.00085018	-3.9327	-0.0016152	410.71419972580463	61.685	0.50525	61.793	61.612	62.117	0.10743					28	21	2	0	0	0	0.69914	1	5368	5368		40.573	0	1	252250			27187	7549	18312	18322	30900	30900					-0.000892217913587956
LGLCPRAN	8	Unmodified	_LGLCPRAN_					0	0	0		ENST00000575981.1_1_16:3022956-3024767:-|nuORF	ENST00000575981.1_1_16:3022956-3024767:-|nuORF	ENST00000575981.1_1_16:3022956-3024767:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2284240722656	2	422.228905	842.443257	-1.5313	-0.00064655	-0.46852	-0.00019782	-1.9998	-0.00084437	422.228628241818	64.101	0.62197	64.101	63.67	64.292	0					53	29	2	0	0	0	0.85277	1	5623	5623		25.45	3.4903	1	218720			27188	14056	18313	18323	30901	30901					0.015733065396716484
LGLCPRAN	8	Unmodified	_LGLCPRAN_					0	0	0		ENST00000575981.1_1_16:3022956-3024767:-|nuORF	ENST00000575981.1_1_16:3022956-3024767:-|nuORF	ENST00000575981.1_1_16:3022956-3024767:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.22796630859375	2	422.228905	842.443257	-0.18805	-7.94E-05	-1.9096	-0.00080628	-2.0976	-0.00088568	422.2279917800992	63.929	0.72619	63.928	63.441	64.167	-0.00078583					51	28	3	0	0	0	0.88915	1	5960	5960		35.201	3.2459	1	195170			27189	14056	18313	18323	30902	30902					0.015733065396716484
LGLCPRAN	8	Unmodified	_LGLCPRAN_					0	0	0		ENST00000575981.1_1_16:3022956-3024767:-|nuORF	ENST00000575981.1_1_16:3022956-3024767:-|nuORF	ENST00000575981.1_1_16:3022956-3024767:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2279968261719	2	422.228905	842.443257	-0.30034	-0.00012681	-1.6211	-0.00068449	-1.9215	-0.0008113	422.22807899048587	64.416	1.0603	64.382	64.026	65.086	-0.034248					75	29	3	0	0	0	0.86791	1	6120	6120		28.254	4.0515	1	581950			27190	14056	18313	18323	30903	30903					0.015733065396716484
LGLCPRAN	8	Unmodified	_LGLCPRAN_					0	0	0		ENST00000575981.1_1_16:3022956-3024767:-|nuORF	ENST00000575981.1_1_16:3022956-3024767:-|nuORF	ENST00000575981.1_1_16:3022956-3024767:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.22625732421875	2	422.228905	842.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.547	1	61.577	61.077	62.077	0.029575								0	0	0	0.29498	1	5734	5734		26.796	1.222	1				27191	14056	18313	18323	30904	30904					0.015733065396716484
LGLCPRAN	8	Unmodified	_LGLCPRAN_					0	0	0		ENST00000575981.1_1_16:3022956-3024767:-|nuORF	ENST00000575981.1_1_16:3022956-3024767:-|nuORF	ENST00000575981.1_1_16:3022956-3024767:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2271728515625	2	422.228905	842.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.016	1	61.117	60.617	61.617	0.10082								0	0	0	0.29452	1	5305	5305		33.516	0.022601	1				27192	14056	18313	18323	30905	30905					0.015733065396716484
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7796325683594	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.884	1	2949	2949		33.516	1.5607	1	2581600			27193	2277	18314	18324	30906	30906					0.10388447425293634
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2719421386719	2	434.778754	867.542954	-0.16827	-7.316E-05	3.0347	0.0013194	2.8664	0.0012463	434.7799549539411	61.813	0.95731	61.803	61.544	62.502	-0.0094147					63	42	2	0	0	0	0.4196	1	5719	5719		28.254	15.295	1	307740			27194	2277	18314	18324	30907	30907					0.10388447425293634
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796630859375	2	434.778754	867.542954	-1.003	-0.00043608	3.6101	0.0015696	2.6071	0.0011335	434.7801973515074	45.237	1.8216	45.206	44.189	46.01	-0.031067					113	41	4	0	0	0	0.86791	1	3694	3694		28.254	1.4582	1	1431800			27195	2277	18314	18324	30908	30908					0.10388447425293634
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7790832519531	2	434.778754	867.542954	-0.52026	-0.0002262	3.3297	0.0014477	2.8095	0.0012215	434.78008033903114	55.345	1.972	55.318	54.208	56.18	-0.027275					116	58	3	0	0	0	0.91005	1	5009	5009		42.474	8.9589	1	290730			27196	2277	18314	18324	30909	30909					0.10388447425293634
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7807312011719	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.4	1	67.364	66.864	67.864	-0.035698								0	0	0	0.29344	1	6470	6470		31.955	2.8053	1				27197	2277	18314	18324	30910	30910					0.10388447425293634
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2520751953125	2	434.778754	867.542954	1.9227	0.00083594	0.94477	0.00041077	2.8674	0.0012467	434.77926001204054	84.46	2.3819	84.52	82.858	85.24	0.059258					75	54	2	0	0	0	0.4196	1	8301	8301		42.474	10.52	1	82990			27198	2277	18314	18324	30911	30911					0.10388447425293634
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7792663574219	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.87479	1	3351	3351		30.504	0	1	2364100			27199	2277	18314	18324	30912	30912					0.10388447425293634
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801818847656	2	434.778754	867.542954	0.13638	5.9295E-05	3.2501	0.0014131	3.3864	0.0014724	434.7800361226264	34.243	0.88012	34.352	33.821	34.701	0.10829					118	39	4	0	0	0	0.91005	1	1715	1715		42.474	0	1	2838300			27200	2277	18314	18324	30913	30913					0.10388447425293634
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78070068359375	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.88915	1	3605	3605		35.201	0	1	1986600			27201	2277	18314	18324	30914	30914					0.10388447425293634
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7789001464844	2	434.778754	867.542954	0.38509	0.00016743	2.4443	0.0010627	2.8294	0.0012301	434.77974914069443	61.654	1.1298	61.773	61.481	62.611	0.11901					111	53	3	0	0	0	0.81548	2	5368	5361;5368		28.254	0	1	353960			27202	2277	18314	18324	30915;30916	30916					0.10388447425293634
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7776184082031	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.907	1	66.46	65.96	66.96	0.5526								0	0	0	0.29344	1	7193	7193		31.955	0	1				27203	2277	18314	18324	30917	30917					0.10388447425293634
LGLDPKLL	8	Unmodified	_LGLDPKLL_					0	0	0		ENST00000428288.2_1_7:27565835-27702463:-|nuORF;ENSG00000106049|ENST00000265395|HIBADH	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	ENST00000428288.2_1_7:27565835-27702463:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	434.778754	867.542954	0.6884	0.0002993	2.0869	0.00090732	2.7753	0.0012066	434.77975541689153	84.571	0.73885	84.499	84.108	84.847	-0.07196	-0.010121	0.00074743	NaN	42.474	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54614			27204	2277	18314	18324							0.10388447425293634
LGLEAAARP	9	Unmodified	_LGLEAAARP_					0	0	0		ENST00000533069.1_1_11:394244-396720:+|nuORF	ENST00000533069.1_1_11:394244-396720:+|nuORF	ENST00000533069.1_1_11:394244-396720:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2599792480469	2	449.261259	896.507966	-1.3066	-0.000587	0.0064579	2.9013E-06	-1.3001	-0.0005841	449.2609052127223	72.511	0.72772	72.643	72.306	73.033	0.13145					51	25	3	0	0	0	0.78058	1	6631	6631		30.504	1.3541	1	221400			27205	13390	18315	18325	30918	30918					0.055572046173210765
LGLELSDP	8	Unmodified	_LGLELSDP_					0	0	0			REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2282409667969	2	422.226551	842.438549	0.082016	3.4629E-05	3.2344	0.0013657	3.3164	0.0014003	422.22785524521964	58.566	1.4877	59.12	58.47	59.958	0.55323					63	36	2	0	0	0	0.81548	1	6140	6140		20.482	0	1	468490	+		27206	26872	18316	18326	30919	30919					0.011027008779137759
LGLEPLALA	9	Unmodified	_LGLEPLALA_					0	0	0		nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;ENSG00000081853|ENST00000394576|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.7728271484375	2	448.776211	895.537869	-1.2452	-0.00055882	2.0051	0.00089985	0.75992	0.00034103	448.7770146242483	41.311	0.93086	41.27	40.922	41.853	-0.040806					43	24	2	0	0	0	0.7932	1	3096	3096		25.45	2.4077	1	291330			27207	1472	18317	18327	30920	30920					0.08592143562657384
LGLEPLALA	9	Unmodified	_LGLEPLALA_					0	0	0		nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;ENSG00000081853|ENST00000394576|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.7770690917969	2	448.776211	895.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.916	1	49.958	49.458	50.458	0.042236								0	0	0	0.29299	1	3894	3894		33.516	8.0654	1				27208	1472	18317	18327	30921	30921					0.08592143562657384
LGLEPLALA	9	Unmodified	_LGLEPLALA_					0	0	0		nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;ENSG00000081853|ENST00000394576|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	448.776211	895.537869	-1.8672	-0.00083797	3.0068	0.0013494	1.1396	0.00051141	448.77734568560066	40.919	1.2135	40.919	40.595	41.808	0	-0.083533	0.0011156	NaN	25.45	67	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	311090			27209	1472	18317	18327							0.08592143562657384
LGLEPLALA	9	Unmodified	_LGLEPLALA_					0	0	0		nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;ENSG00000081853|ENST00000394576|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	448.776211	895.537869	-2.4456	-0.0010975	2.7139	0.0012179	0.26831	0.00012041	448.77721341355067	40.304	0.97047	40.696	39.964	40.935	0.39209	-0.30594	0.00085271	NaN	25.45	40	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	646510			27210	1472	18317	18327							0.08592143562657384
LGLEPLALA	9	Unmodified	_LGLEPLALA_					0	0	0		nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;ENSG00000081853|ENST00000394576|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	448.776211	895.537869	-1.3235	-0.00059397	2.209	0.00099134	0.88545	0.00039737	448.77645415771326	40.176	0.99668	40.765	40.217	41.214	0.58915	-0.23692	0.00039951	NaN	25.45	49	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	599710			27211	1472	18317	18327							0.08592143562657384
LGLEPLLDL	9	Unmodified	_LGLEPLLDL_					0	0	0		nc|ENSG00000104936|Q09013-12|DMPK;nc|ENSG00000104936|Q09013-10|DMPK;nc|ENSG00000104936|Q09013-11|DMPK;nc|ENSG00000104936|Q09013-15|DMPK;ENSG00000104936|ENST00000291270|DMPK;nc|ENSG00000104936|Q09013-16|DMPK	nc|ENSG00000104936|Q09013-12|DMPK	nc|ENSG00000104936|Q09013-12|DMPK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7955627441406	2	491.794601	981.574648	-0.70147	-0.00034498	3.2327	0.0015898	2.5312	0.0012448	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.7932	1	4677	4677		24.203	3.7209	1	1759500			27212	2169	18318	18328	30922	30922					0.08312395388577443
LGLEPLLDL	9	Unmodified	_LGLEPLLDL_					0	0	0		nc|ENSG00000104936|Q09013-12|DMPK;nc|ENSG00000104936|Q09013-10|DMPK;nc|ENSG00000104936|Q09013-11|DMPK;nc|ENSG00000104936|Q09013-15|DMPK;ENSG00000104936|ENST00000291270|DMPK;nc|ENSG00000104936|Q09013-16|DMPK	nc|ENSG00000104936|Q09013-12|DMPK	nc|ENSG00000104936|Q09013-12|DMPK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79541015625	2	491.794601	981.574648	0.30701	0.00015099	1.9707	0.0009692	2.2778	0.0011202	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.7932	1	3330	3330		23.042	1.0826	1	3201400			27213	2169	18318	18328	30923	30923					0.08312395388577443
LGLFVGARV	9	Unmodified	_LGLFVGARV_					0	0	0			REV__ENSG00000006831|ENST00000357103|ADIPOR2	REV__ENSG00000006831|ENST00000357103|ADIPOR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.7919006347656	2	466.28982	930.565087	-1.0457	-0.00048758	1.1245	0.00052435	0.078871	3.6777E-05	466.29021591001344	73.859	1.0735	73.986	73.713	74.787	0.1271					83	42	3	0	0	0	0.78851	1	6846	6846		28.254	2.8041	1	958110	+		27214	16113	18319	18329	30924	30924					0.09702671893717252
LGLGGVLPL	9	Unmodified	_LGLGGVLPL_					0	0	0			REV__ENST00000466256.6_1_1:17257024-17267483:+|nuORF	REV__ENST00000466256.6_1_1:17257024-17267483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.77484130859375	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.78292	1	2847	2847		29.842	0	1	10440000	+		27215	27124	18320	18330	30925	30925					0.10712464770847419
LGLGGVLPL	9	Unmodified	_LGLGGVLPL_					0	0	0			REV__ENST00000466256.6_1_1:17257024-17267483:+|nuORF	REV__ENST00000466256.6_1_1:17257024-17267483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7750244140625	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.78292	1	2890	2890		29.842	3.0454	1	9723800	+		27216	27124	18320	18330	30926	30926					0.10712464770847419
LGLGGVLPL	9	Unmodified	_LGLGGVLPL_					0	0	0			REV__ENST00000466256.6_1_1:17257024-17267483:+|nuORF	REV__ENST00000466256.6_1_1:17257024-17267483:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7747497558594	2	419.773471	837.53239	-1.7976	-0.00075458	3.9115	0.0016419	2.1139	0.00088736	419.77504327395843	41.402	2.6775	41.816	41.329	44.007	0.4139					184	68	5	0	0	0	0.78292	1	3717	3717		29.842	0	1	169320000	+		27217	27124	18320	18330	30927	30927					0.10712464770847419
LGLGLMLM	8	Unmodified	_LGLGLMLM_					0	0	0		ENST00000496332.5_1_1:155170600-155172038:-|nuORF	ENST00000496332.5_1_1:155170600-155172038:-|nuORF	ENST00000496332.5_1_1:155170600-155172038:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.3059387207031	2	424.242635	846.470717	0.86869	0.00036854	0.39544	0.00016776	1.2641	0.0005363	424.24228279913484	34.806	0.67522	35.016	34.646	35.321	0.21002					26	16	2	0	0	0	0.4196	1	2590	2590		24.504	0	1	123860			27218	12780	18321	18331	30928	30928					0.04134073755710688
LGLGLRKL	8	Unmodified	_LGLGLRKL_					0	0	0		ENSG00000154269|ENST00000357639|ENPP3;ENST00000470930.5_1_6:131962606-131979536:+|nuORF;ENST00000427707.5_1_6:131962606-131995523:+|nuORF	ENSG00000154269|ENST00000357639|ENPP3	ENSG00000154269|ENST00000357639|ENPP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.29931640625	2	435.300188	868.585822	-1.3785	-0.00060007	1.5278	0.00066505	0.14927	6.4979E-05	435.30073733409733	75.396	1.3729	75.483	74.943	76.316	0.087639					63	36	2	0	0	0	0.85228	1	7053	7053		10.185	0	1	527430			27219	5271	18322	18332	30929	30929					0.14627262273359065
LGLGPEIGG	9	Unmodified	_LGLGPEIGG_					0	0	0			REV__ENST00000564644.5_1_15:75917718-75917934:-|nuORF	REV__ENST00000564644.5_1_15:75917718-75917934:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7285461425781	2	406.729261	811.443968	-0.18786	-7.6407E-05	-2.7564	-0.0011211	-2.9442	-0.0011975	406.7280690694445	76.123	2.0682	76.173	74.921	76.99	0.049194					93	66	2	0	0	0	0.69914	1	7311	7311		40.573	0	1	123610	+		27220	28842	18323	18333	30930	30930					0.03070424460383947
LGLGPEIGG	9	Unmodified	_LGLGPEIGG_					0	0	0			REV__ENST00000564644.5_1_15:75917718-75917934:-|nuORF	REV__ENST00000564644.5_1_15:75917718-75917934:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.729261	811.443968	-1.3553	-0.00055124	-1.2768	-0.0005193	-2.6321	-0.0010705	406.7285258151569	76.207	0.93286	76.207	75.651	76.584	0	-0.01934	0.00068965	NaN	40.573	52	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59383	+		27221	28842	18323	18333							0.03070424460383947
LGLGPEIGG	9	Unmodified	_LGLGPEIGG_					0	0	0			REV__ENST00000564644.5_1_15:75917718-75917934:-|nuORF	REV__ENST00000564644.5_1_15:75917718-75917934:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	406.729261	811.443968	0.50952	0.00020724	-3.3416	-0.0013591	-2.832	-0.0011519	406.72784334119905	75.995	2.0602	76.129	74.764	76.824	0.13325	-0.098032	-0.00098997	NaN	40.573	108	61	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114450	+		27222	28842	18323	18333							0.03070424460383947
LGLGVIKI	8	Unmodified	_LGLGVIKI_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7854309082031	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.80963	1	1278	1278		15.636	0	1	1286900	+		27223	20899	18324	18334	30931	30931					0.13981055150509292
LGLHHLLGA	9	Unmodified	_LGLHHLLGA_					0	0	0			REV__ENST00000339381.5_1_1:1268919-1269807:+|nuORF	REV__ENST00000339381.5_1_1:1268919-1269807:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7775573730469	2	465.779619	929.544686	-0.25577	-0.00011913	-4.1501	-0.001933	-4.4059	-0.0020522	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.7932	1	7910	7910		21.702	0.7554	1	451640	+		27224	25230	18325	18335	30932	30932					0.07709501233898663
LGLHKQLFA	9	Unmodified	_LGLHKQLFA_					0	0	0			REV__ENSG00000146070|ENST00000274793|PLA2G7	REV__ENSG00000146070|ENST00000274793|PLA2G7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8093872070312	2	513.808377	1025.6022	-1.3056	-0.00067082	2.7011	0.0013878	1.3955	0.00071702	513.8096751801179	57.77	1.4975	57.77	57.038	58.535	0					86	59	2	0	0	0	0.7932	1	5017	5017		24.203	1.1603	1	92374	+		27225	19985	18326	18336	30933	30933					0.09042343439477918
LGLHPFLD	8	Unmodified	_LGLHPFLD_					0	0	0			REV__ENSG00000114933|ENST00000403263|INO80D	REV__ENSG00000114933|ENST00000403263|INO80D	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79315185546875	2	456.252903	910.491253	-1.2637	-0.00057659	-1.4004	-0.00063894	-2.6641	-0.0012155	456.25207342530007	36.355	0.23658	36.382	36.23	36.467	0.026161					10	6	2	0	0	0	0.4196	1	2003	2003		20.482	0	1	29155	+		27226	18075	18327	18337	30934	30934					0.03242703731382335
LGLHPFLD	8	Unmodified	_LGLHPFLD_					0	0	0			REV__ENSG00000114933|ENST00000403263|INO80D	REV__ENSG00000114933|ENST00000403263|INO80D	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7932434082031	2	456.252903	910.491253	-1.2652	-0.00057727	-1.2487	-0.00056973	-2.5139	-0.001147	456.2521879478264	35.573	0.98039	35.604	35.255	36.235	0.031132					48	27	2	0	0	0	0.4196	1	1949	1949		37.028	0	1	75254	+		27227	18075	18327	18337	30935	30935					0.03242703731382335
LGLHPFLD	8	Unmodified	_LGLHPFLD_					0	0	0			REV__ENSG00000114933|ENST00000403263|INO80D	REV__ENSG00000114933|ENST00000403263|INO80D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7933044433594	2	456.252903	910.491253	-0.075227	-3.4322E-05	-3.9043	-0.0017814	-3.9795	-0.0018157	456.2518421735373	35.376	1.2996	35.624	34.934	36.234	0.2477					83	33	3	0	0	0	0.4196	1	2793	2793		44.531	14.027	1	189820	+		27228	18075	18327	18337	30936	30936					0.03242703731382335
LGLIALSPK	9	Unmodified	_LGLIALSPK_					0	0	0		ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3011169433594	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.78536	1	1918	1918		29.15	0	1	1057300			27229	10816	18328	18338	30937	30937					0.1262842283366581
LGLIALSPK	9	Unmodified	_LGLIALSPK_					0	0	0		ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3011169433594	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.67235	1	2047	2047		42.474	0	1	1715600			27230	10816	18328	18338	30938	30938					0.1262842283366581
LGLILAAVVEV	11	Unmodified	_LGLILAAVVEV_					0	0	0		ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.8471069335938	2	548.85245	1095.69035	-1.7957	-0.00098556	3.1714	0.0017407	1.3758	0.00075509	548.854107756805	41.735	1.0082	42.369	42.06	43.068	0.6339					60	25	4	0	0	0	0.74555	1	3682	3682		23.042	1.0826	1	1623000			27231	7361	18329	18339	30939	30939					0.14632919239420517
LGLILLVRQLS	11	Unmodified	_LGLILLVRQLS_					0	0	0			REV__ENSG00000153982|ENST00000284116|GDPD1	REV__ENSG00000153982|ENST00000284116|GDPD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.8795166015625	2	612.905548	1223.79654	1.1742	0.00071968	0.47238	0.00028952	1.6466	0.0010092	612.9052430880828	104.23	0.35747	104.4	104.14	104.5	0.17096					15	8	3	0	0	0	0.17318	1	11064	11064		19.104	0	1	410910	+		27232	20365	18330	18340	30940	30940					0.19359674804763927
LGLILPVLCLR	11	Unmodified	_LGLILPVLCLR_					0	0	0			REV__CON__Q3KUS7	REV__CON__Q3KUS7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9295654296875	3	403.929905	1208.76789	-0.86	-0.00034738	0.20504	8.2823E-05	-0.65496	-0.00026456	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.76251	1	3795	3795		19.263	5.7547	1	2612300	+	+	27233	16009	18331	18341	30941	30941					0.17185233903933295
LGLILSWR	8	Unmodified	_LGLILSWR_					0	0	0		ENST00000455395.5_1_X:73511618-73511753:-|nuORF	ENST00000455395.5_1_X:73511618-73511753:-|nuORF	ENST00000455395.5_1_X:73511618-73511753:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.30181884765625	2	479.297645	956.580737	2.6403	0.0012655	2.8361	0.0013593	5.4764	0.0026248	479.2988258244206	109.14	0.28592	109.21	108.98	109.27	0.06794					23	15	3	0	0	0	0.87922	1	13236	13236		31.955	5.1588	1	350270			27234	11950	18332	18342	30942	30942					0.10070958410756248
LGLIQPIPKN	10	Unmodified	_LGLIQPIPKN_					0	0	0		nc|ENSG00000130856|Q9UL36-2|ZNF236;nc|ENSG00000130856|Q9UL36|ZNF236;ENSG00000130856|ENST00000320610|ZNF236	nc|ENSG00000130856|Q9UL36-2|ZNF236	nc|ENSG00000130856|Q9UL36-2|ZNF236	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8405151367188	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.86718	1	10786	10786		27.882	4.8398	1	44929000			27235	3694	18333	18343	30943	30943					0.12811168299458586
LGLIRKQEN	9	Unmodified	_LGLIRKQEN_					0	0	0			REV__nc|ENSG00000132792|Q8WYA6-3|CTNNBL1	REV__nc|ENSG00000132792|Q8WYA6-3|CTNNBL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.8137817382812	2	535.819473	1069.62439	-0.57977	-0.00031065	-3.5	-0.0018754	-4.0797	-0.002186	535.8181488865579	99.613	1.3247	99.613	99.138	100.46	0					52	31	2	0	0	0	0.7932	1	10052	10052		19.997	2.6318	1	262870	+		27236	19032	18334	18344	30944	30944					0.09236523117237994
LGLITVAVP	9	Unmodified	_LGLITVAVP_					0	0	0			REV__nc|ENSG00000172139|Q4G0N8-2|SLC9C1	REV__nc|ENSG00000172139|Q4G0N8-2|SLC9C1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.78765869140625	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.64338	1	2782	2782		44.531	0	1	11085000	+		27237	21804	18335	18345	30945	30945					0.11308733942325944
LGLITVLPLL	10	Unmodified	_LGLITVLPLL_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.358154296875	2	526.359911	1050.70527	-1.5676	-0.00082514	3.904	0.0020549	2.3364	0.0012298	526.3617973555264	35.031	1.6441	35.031	34.615	36.259	0					148	43	4	0	0	0	0.85694	1	2060	2060		21.96	4.5949	1	1307600	+		27238	16914	18336	18346	30946	30946					0.18194411107424457
LGLKGNPL	8	Unmodified	_LGLKGNPL_					0	0	0		ENST00000506166.1_1_4:78663390-78740391:-|nuORF;ENSG00000138767|ENST00000504123|CNOT6L;ENSG00000113300|ENST00000261951|CNOT6	ENST00000506166.1_1_4:78663390-78740391:-|nuORF	ENST00000506166.1_1_4:78663390-78740391:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2560729980469	2	406.255446	810.496338	-1.0502	-0.00042665	4.3192	0.0017547	3.269	0.001328	406.2570843859401	63.493	2.0267	63.523	62.229	64.256	0.030243					140	91	2	0	0	0	0.86288	1	5611	5611		26.796	6.3143	1	164860			27239	2712	18337	18347	30947	30947					0.08351007594001203
LGLKQLPEP	9	Unmodified	_LGLKQLPEP_					0	0	0		nc|ENSG00000170959|M0R2J8|DCDC1;chr11:30915711-30916870|14|14.5|0.66|4.46|-|ENST00000597505|DCDC1,DCDC1;chr11:30911420-30915511|13|14.38|0.7|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30909116-30911327|13|15.38|0.76|4.34|-|ENST00000597505|DCDC1,DCDC1;chr11:30905164-30906540|21|14.05|0.72|4.28|-|ENST00000597505|DCDC1,DCDC1;chr11:30903683-30904961|18|18.22|0.57|5.0|-|ENST00000597505|DCDC1,DCDC1;chr11:30899642-30900346|23|15.83|0.82|4.27|-|ENST00000597505|DCDC1,DCDC1;chr11:30894384-30899541|18|19.5|0.94|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30892997-30894248|22|18.0|0.9|4.32|-|ENST00000597505|DCDC1,DCDC1;ENSG00000170959|ENST00000684477|DCDC1;ENST00000342355.8_1_11:30965860-31263019:-|nuORF	nc|ENSG00000170959|M0R2J8|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.8002014160156	2	497.800217	993.585882	-0.64969	-0.00032342	0.46674	0.00023234	-0.18295	-9.1074E-05	497.8003068501005	69.219	0.68383	69.182	68.854	69.538	-0.036964					74	32	3	0	0	0	0.5393	1	6722	6722		50.025	0	1	424530			27240	100	18338	18348	30948	30948					0.08883217482718919
LGLKRDDS	8	Unmodified	_LGLKRDDS_					0	0	0			REV__ENST00000392818.7_1_7:150779672-150779920:-|nuORF	REV__ENST00000392818.7_1_7:150779672-150779920:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.2283935546875	2	452.248349	902.482145	4.6668	0.0021106	-2.0184	-0.0009128	2.6485	0.0011978	452.24730740035477	107.54	0.35458	107.65	107.33	107.69	0.11715					21	16	2	0	0	0	0.4196	1	13130	13130		33.516	12.569	1	84687	+		27241	26033	18339	18349	30949	30949					0.0270031037505305
LGLKRDDS	8	Unmodified	_LGLKRDDS_					0	0	0			REV__ENST00000392818.7_1_7:150779672-150779920:-|nuORF	REV__ENST00000392818.7_1_7:150779672-150779920:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	452.248349	902.482145	1.1913	0.00053877	2.6481	0.0011976	3.8394	0.0017364	452.2488023329823	107.54	0.29819	107.64	107.49	107.79	0.10396	-0.0052539	0.0036196	NaN	33.516	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93617	+		27242	26033	18339	18349							0.0270031037505305
LGLKVRRGRD	10	Unmodified	_LGLKVRRGRD_					0	0	0		ENST00000535406.5_1_12:6960197-6960251:-|nuORF	ENST00000535406.5_1_12:6960197-6960251:-|nuORF	ENST00000535406.5_1_12:6960197-6960251:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	585.3634643554688	2	585.364913	1168.71527	-0.18229	-0.0001067	-0.22107	-0.00012941	-0.40336	-0.00023611	585.3648405921209	97.546	1.1049	97.595	97.127	98.232	0.048157					65	25	3	0	0	0	0.85939	1	10406	10406		23.042	1.0826	1	487150			27243	13421	18340	18350	30950	30950					0.1376641188535359
LGLKWLAR	8	Unmodified	_LGLKWLAR_					0	0	0			REV__ENST00000246151.8_1_1:24113939-24114161:+|nuORF	REV__ENST00000246151.8_1_1:24113939-24114161:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8057556152344	2	478.805637	955.596721	-0.92452	-0.00044266	2.2693	0.0010865	1.3448	0.00064388	478.80664804898805	39.433	1.9403	39.444	38.3	40.24	0.010708					89	52	2	0	0	0	0.80706	1	2468	2468		19.36	4.6959	1	287670	+		27244	24257	18341	18351	30951	30951					0.11714664647661266
LGLLALQP	8	Unmodified	_LGLLALQP_					0	0	0		ENSG00000178397|ENST00000313324|FAM220A	ENSG00000178397|ENST00000313324|FAM220A	ENSG00000178397|ENST00000313324|FAM220A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7669372558594	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.82464	1	2586	2586		21.702	0	1	2034000			27245	7205	18342	18352	30952	30952					0.09792178253815109
LGLLAPLTA	9	Unmodified	_LGLLAPLTA_					0	0	0			REV__ENST00000472157.1_1_1:46806507-46807258:+|nuORF	REV__ENST00000472157.1_1_1:46806507-46807258:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.780029296875	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.78851	1	2639	2639		28.254	0	1	2524800	+		27246	27254	18343	18353	30953	30953					0.10388447425282266
LGLLAQPL	8	Unmodified	_LGLLAQPL_					0	0	0			REV__ENST00000545712.6_1_12:109994590-109994683:-|nuORF	REV__ENST00000545712.6_1_12:109994590-109994683:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7666015625	2	412.765646	823.516739	0.2674	0.00011037	3.4179	0.0014108	3.6853	0.0015212	412.76694459903433	48.848	3.1893	48.886	47.742	50.932	0.037731					149	88	4	0	0	0	0.87276	1	3717	3717		29.842	0	1	734040	+		27247	28529	18344	18354	30954	30954					0.09792178253815109
LGLLAWRPG	9	Unmodified	_LGLLAWRPG_					0	0	0		nc|ENSG00000142513|Q9BZG2-2|ACP4;ENSG00000142513|ENST00000270593|ACP4	nc|ENSG00000142513|Q9BZG2-2|ACP4	nc|ENSG00000142513|Q9BZG2-2|ACP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.2941589355469	2	491.795269	981.575986	-0.91317	-0.00044909	1.7019	0.00083701	0.78877	0.00038791	491.79595933805444	45.694	2.2667	46.589	46.327	48.594	0.89542					151	55	4	0	0	0	0.7932	1	4433	4433		23.042	4.7181	1	3110500			27248	4565	18345	18355	30955	30955					0.08446074267999393
LGLLCLHL	8	Unmodified	_LGLLCLHL_					0	0	0			REV__ENSG00000181392|ENST00000324444|SYNE4	REV__ENSG00000181392|ENST00000324444|SYNE4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.2703552246094	2	441.267499	880.520445	-0.15966	-7.0454E-05	4.3259	0.0019089	4.1663	0.0018384	441.2698352320821	63.297	0.77139	63.264	62.759	63.531	-0.033714					49	34	2	0	0	0	0.84567	1	6001	6001		24.504	0	1	73939	+		27249	22456	18346	18356	30956	30956					0.07540524756029754
LGLLDTRR	8	Unmodified	_LGLLDTRR_					0	0	0			REV__chr10:133327447-133327905|24|27.12|0.47|5.84|-|0|None,CALY|1	REV__chr10:133327447-133327905|24|27.12|0.47|5.84|-|0|None,CALY|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2867736816406	2	472.287808	942.561064	2.4783	0.0011705	-1.6779	-0.00079243	0.80042	0.00037803	472.28709322712206	99.355	1.7964	99.301	98.824	100.62	-0.053734					80	41	2	0	0	0	0.884	1	10819	10819		33.516	1.5607	1	447940	+		27250	15468	18347	18357	30957	30957					0.08748582400005489
LGLLGIVVE	9	Unmodified	_LGLLGIVVE_					0	0	0			REV__ENST00000496331.1_1_20:4854564-4866632:-|nuORF	REV__ENST00000496331.1_1_20:4854564-4866632:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3009948730469	2	456.791861	911.569169	-1.2376	-0.00056532	3.7836	0.0017283	2.5461	0.001163	456.79347564689675	46.375	1.5387	46.391	45.441	46.979	0.015511					66	42	2	0	0	0	0.20789	1	3430	3430		12.959	0	1	175320	+		27251	16958	18348	18358	30958	30958					0.10984716596749422
LGLLGLLLPV	10	Unmodified	_LGLLGLLLPV_					0	0	0			REV__ENST00000587486.6_1_19:13049472-13049670:+|nuORF	REV__ENST00000587486.6_1_19:13049472-13049670:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	504.3479309082031	2	504.346803	1006.67905	-0.88157	-0.00044462	3.4384	0.0017341	2.5568	0.0012895	504.34836264980135	37.732	1.4084	37.682	37.008	38.417	-0.050373					93	31	4	0	0	0	0.85976	1	2615	2615		35.201	0	1	910350	+		27252	22325	18349	18359	30959	30959					0.17598141935945932
LGLLGRFGFLA	11	Unmodified	_LGLLGRFGFLA_					0	0	0			REV__ENST00000564574.5_2_16:28493646-28503072:-|nuORF	REV__ENST00000564574.5_2_16:28493646-28503072:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3569946289062	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.42	1	118.4	117.9	118.9	-0.024208								0	0	0	0.56276	1	13117	13117		15.642	0	1		+		27253	28839	18350	18360	30960	30960					0.11142874536380987
LGLLGRPWT	9	Unmodified	_LGLLGRPWT_					0	0	0			REV__ENST00000530562.5_1_11:74656092-74660222:-|nuORF	REV__ENST00000530562.5_1_11:74656092-74660222:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7991027832031	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.241	1	49.241	48.741	49.741	0								0	0	0	0.30416	1	3868	3868		29.15	3.6994	1		+		27254	28284	18351	18361	30961	30961					0.08122056922411502
LGLLGRPWT	9	Unmodified	_LGLLGRPWT_					0	0	0			REV__ENST00000530562.5_1_11:74656092-74660222:-|nuORF	REV__ENST00000530562.5_1_11:74656092-74660222:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.7999267578125	2	506.800552	1011.58655	-1.1816	-0.00059884	1.4736	0.00074682	0.29199	0.00014798	506.8012726682809	44.534	3.0875	44.53	42.489	45.577	-0.0041618					139	73	2	0	0	0	0.64922	1	3324	3324		44.117	6.9577	1	459990	+		27255	28284	18351	18361	30962	30962					0.08122056922411502
LGLLGRPWT	9	Unmodified	_LGLLGRPWT_					0	0	0			REV__ENST00000530562.5_1_11:74656092-74660222:-|nuORF	REV__ENST00000530562.5_1_11:74656092-74660222:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8004150390625	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.922	1	43.931	43.431	44.431	0.0084534								0	0	0	0.32159	1	3062	3062		23.042	0	1		+		27256	28284	18351	18361	30963	30963					0.08122056922411502
LGLLGTLVAM	10	Unmodified	_LGLLGTLVAM_					0	0	0		ENSG00000165376|ENST00000336803|CLDN2	ENSG00000165376|ENST00000336803|CLDN2	ENSG00000165376|ENST00000336803|CLDN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.3009338378906	2	494.298996	986.583439	0.88078	0.00043537	2.7937	0.0013809	3.6744	0.0018163	494.3002880194073	97.072	3.8769	97.462	96.82	100.7	0.39066					309	95	6	0	0	0	0.84112	2	11730	11670;11730		37.159	1.5408	1	27149000			27257	6077	18352	18362	30964;30965	30965					0.08961045753403596
LGLLLAAPA	9	Unmodified	_LGLLLAAPA_					0	0	0		ENSG00000196743|ENST00000357164|GM2A	ENSG00000196743|ENST00000357164|GM2A	ENSG00000196743|ENST00000357164|GM2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7755126953125	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.78292	1	3631	3631		29.842	3.0454	1	184570000			27258	8099	18353	18363	30966	30966					0.1071246477083605
LGLLLAARQVR	11	Unmodified	_LGLLLAARQVR_					0	0	0		ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.92950439453125	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.76579	1	3471	3471		18.531	3.8374	1	2526100			27259	8323	18354	18364	30967	30967					0.17569039722025082
LGLLLAARQVR	11	Unmodified	_LGLLLAARQVR_					0	0	0		ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9296569824219	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.74022	2	3876	3876;3939		24.232	10.146	1	2612300			27260	8323	18354	18364	30968;30969	30968					0.17569039722025082
LGLLLAARQVR	11	Unmodified	_LGLLLAARQVR_					0	0	0		ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9297790527344	3	403.931185	1208.77173	0.25098	0.00010138	-4.1453	-0.0016744	-3.8943	-0.001573	403.92942319004646	47.073	4.6899	47.112	45.811	50.501	0.038181					268	130	4	0	0	0	0.78309	2	3543	3515;3543		12.957	6.2979	1	2178500			27261	8323	18354	18364	30970;30971	30971					0.17569039722025082
LGLLLAARQVR	11	Unmodified	_LGLLLAARQVR_					0	0	0		ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.92938232421875	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.266	1	47.179	46.679	47.679	-0.087646								0	0	0	0.56276	1	3523	3523		12.957	2.3707	1				27262	8323	18354	18364	30972	30972					0.17569039722025082
LGLLLAARQVR	11	Unmodified	_LGLLLAARQVR_					0	0	0		ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9295349121094	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.323	1	47.235	46.735	47.735	-0.087646								0	0	0	0.56276	1	3531	3531		17.167	3.6588	1				27263	8323	18354	18364	30973	30973					0.17569039722025082
LGLLLAARQVR	11	Unmodified	_LGLLLAARQVR_					0	0	0		ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9299621582031	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.463	1	47.375	46.875	47.875	-0.087646								0	0	0	0.56276	1	3551	3551		12.957	0	1				27264	8323	18354	18364	30974	30974					0.17569039722025082
LGLLLAARQVR	11	Unmodified	_LGLLLAARQVR_					0	0	0		ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9289245605469	3	403.931185	1208.77173	-1.975	-0.00079776	-4.1289	-0.0016678	-6.1039	-0.0024656	403.9294096595759	43	1.2076	43.71	43.311	44.519	0.71021					95	29	4	0	0	0	0.78309	1	3860	3860		9.2118	0	1	4109900			27265	8323	18354	18364	30975	30975					0.17569039722025082
LGLLLAARQVR	11	Unmodified	_LGLLLAARQVR_					0	0	0		ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	ENSG00000198754|ENST00000327582|OXCT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.26446533203125	3	403.931185	1208.77173	-0.87886	-0.000355	-3.2249	-0.0013026	-4.1037	-0.0016576	403.9297749934075	46.008	1.1325	46.904	46.447	47.58	0.89542					87	27	4	0	0	0	0.7896	1	4288	4288		13.508	1.5756	1	2092900			27266	8323	18354	18364	30976	30976					0.17569039722025082
LGLLLEKP	8	Unmodified	_LGLLLEKP_					0	0	0			REV__nc|ENSG00000174842|Q92990-2|GLMN	REV__nc|ENSG00000174842|Q92990-2|GLMN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.78759765625	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.884	1	3004	3004		33.516	5.2613	1	11085000	+		27267	30044	18355	18365	30977	30977					0.11308733942325944
LGLLLEKP	8	Unmodified	_LGLLLEKP_					0	0	0			REV__nc|ENSG00000174842|Q92990-2|GLMN	REV__nc|ENSG00000174842|Q92990-2|GLMN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.786376953125	2	441.786579	881.558604	-1.2332	-0.00054481	3.5907	0.0015863	2.3575	0.0010415	441.7880163081002	41.793	3.3981	41.755	40.553	43.951	-0.038223					227	85	5	0	0	0	0.83466	1	3066	3066		23.037	1.3344	1	13573000	+		27268	30044	18355	18365	30978	30978					0.11308733942325944
LGLLLEKP	8	Unmodified	_LGLLLEKP_					0	0	0			REV__nc|ENSG00000174842|Q92990-2|GLMN	REV__nc|ENSG00000174842|Q92990-2|GLMN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7882385253906	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.80963	1	3195	3195		15.636	0.97212	1	403970	+		27269	30044	18355	18365	30979	30979					0.11308733942325944
LGLLLEKP	8	Unmodified	_LGLLLEKP_					0	0	0			REV__nc|ENSG00000174842|Q92990-2|GLMN	REV__nc|ENSG00000174842|Q92990-2|GLMN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.785400390625	2	441.786579	881.558604	-1.1834	-0.00052282	2.9635	0.0013093	1.7801	0.00078643	441.78771241232647	40.14	0.99562	40.729	39.913	40.908	0.58915					63	23	3	0	0	0	0.91005	1	3410	3410		42.474	7.2737	1	2890500	+		27270	30044	18355	18365	30980	30980					0.11308733942325944
LGLLLFSH	8	Unmodified	_LGLLLFSH_					0	0	0		ENST00000323469.4_1_19:2716803-2717172:-|nuORF	ENST00000323469.4_1_19:2716803-2717172:-|nuORF	ENST00000323469.4_1_19:2716803-2717172:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.24853515625	2	450.271096	898.527639	0.25934	0.00011677	0.38517	0.00017343	0.64451	0.0002902	450.27125796797054	63.33	0.74377	63.885	63.425	64.169	0.55449					29	17	2	0	0	0	0.4196	1	6778	6778		13.775	0	1	104420			27271	10051	18356	18366	30981	30981					0.07431580628087886
LGLLLLGPS	9	Unmodified	_LGLLLLGPS_					0	0	0			REV__CON__P02777	REV__CON__P02777	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7879333496094	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.67235	1	2708	2708		42.474	0	1	15753000	+	+	27272	15977	18357	18367	30982	30982					0.11308733942337312
LGLLLLGPS	9	Unmodified	_LGLLLLGPS_					0	0	0			REV__CON__P02777	REV__CON__P02777	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7877502441406	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.7932	1	3207	3207		26.796	0	1	12471000	+	+	27273	15977	18357	18367	30983	30983					0.11308733942337312
LGLLLLGPS	9	Unmodified	_LGLLLLGPS_					0	0	0			REV__CON__P02777	REV__CON__P02777	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	441.786579	881.558604	-1.8946	-0.00083702	4.943	0.0021838	3.0484	0.0013467	441.78869448166665	39.043	2.4731	39.043	38.262	40.735	0	-0.12345	0.00095869	NaN	42.474	226	64	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17495000	+	+	27274	15977	18357	18367							0.11308733942337312
LGLLLLGPS	9	Unmodified	_LGLLLLGPS_					0	0	0			REV__CON__P02777	REV__CON__P02777	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	441.786579	881.558604	-1.286	-0.00056815	4.279	0.0018904	2.993	0.0013223	441.7884067391473	39.145	2.3391	39.098	38.511	40.85	-0.047001	-0.067931	0.00037197	NaN	42.474	191	56	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16218000	+	+	27275	15977	18357	18367							0.11308733942337312
LGLLLLGPS	9	Unmodified	_LGLLLLGPS_					0	0	0			REV__CON__P02777	REV__CON__P02777	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	441.786579	881.558604	-1.5068	-0.00066568	4.5146	0.0019945	3.0078	0.0013288	441.788473975976	39.271	3.4467	39.281	37.539	40.985	0.010708	0.11501	0.00058011	NaN	42.474	275	106	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12757000	+	+	27276	15977	18357	18367							0.11308733942337312
LGLLLPLILS	10	Unmodified	_LGLLLPLILS_					0	0	0		ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.361083984375	2	526.359911	1050.70527	0.086645	4.5607E-05	2.1771	0.0011459	2.2637	0.0011915	526.3609236587663	33.368	2.0596	33.371	32.762	34.822	0.0030785					171	48	5	0	0	0	0.84874	1	2048	2048		18.324	0	1	3096800			27277	10244	18358	18368	30984	30984					0.18194411107424457
LGLLLPLILS	10	Unmodified	_LGLLLPLILS_					0	0	0		ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.36083984375	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.8488	1	2434	2434		17.365	0	1	781950			27278	10244	18358	18368	30985	30985					0.18194411107424457
LGLLLPLILS	10	Unmodified	_LGLLLPLILS_					0	0	0		ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3611450195312	2	526.359911	1050.70527	-0.46682	-0.00024572	2.8843	0.0015182	2.4174	0.0012724	526.3612792747932	37.192	2.9497	37.138	36.203	39.152	-0.053555					173	66	5	0	0	0	0.84874	1	2580	2580		18.324	0	1	2681300			27279	10244	18358	18368	30986	30986					0.18194411107424457
LGLLLPLILS	10	Unmodified	_LGLLLPLILS_					0	0	0		ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3612060546875	2	526.359911	1050.70527	1.057	0.00055634	1.5103	0.00079494	2.5672	0.0013513	526.3605624063631	36.088	1.9344	36.37	35.78	37.714	0.28173					146	47	5	0	0	0	0.86452	1	2777	2777		30.504	0	1	5773200			27280	10244	18358	18368	30987	30987					0.18194411107424457
LGLLLPLILS	10	Unmodified	_LGLLLPLILS_					0	0	0		ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	ENST00000341259.6_1_12:111887440-111887905:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3615112304688	2	526.359911	1050.70527	1.3753	0.00072391	1.3078	0.00068837	2.6831	0.0014123	526.3604424502926	34.187	1.5135	34.492	34.159	35.672	0.30494					130	37	5	0	0	0	0.8488	1	2609	2609		17.365	0	1	5570700			27281	10244	18358	18368	30988	30988					0.18194411107424457
LGLLLPQP	8	Unmodified	_LGLLLPQP_					0	0	0		ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.7748107910156	2	425.773471	849.53239	0.072338	3.08E-05	3.4421	0.0014656	3.5144	0.0014964	425.7748719136107	39.248	3.011	39.218	37.076	40.087	-0.03027					219	70	5	0	0	0	0.87276	2	2707	2695;2707		31.579	1.7373	1	15142000			27282	10091	18359	18369	30989;30990	30990					0.10160464770854105
LGLLLPQP	8	Unmodified	_LGLLLPQP_					0	0	0		ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	425.77490234375	2	425.773471	849.53239	0.42545	0.00018115	3.0537	0.0013002	3.4791	0.0014813	425.7747050516017	38.994	1.8218	39.005	38.08	39.902	0.011173					147	42	5	0	0	0	0.82464	6	2712	2664;2676;2700;2712;2736;2759		39.021	1.993	1	15234000			27283	10091	18359	18369	30991;30992;30993;30994;30995;30996	30994					0.10160464770854105
LGLLLPQP	8	Unmodified	_LGLLLPQP_					0	0	0		ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.77490234375	2	425.773471	849.53239	0.17703	7.5374E-05	3.2935	0.0014023	3.4705	0.0014777	425.7747914132181	38.924	1.3455	39.012	38.418	39.764	0.088371					149	38	5	0	0	0	0.82464	4	2362	2330;2352;2362;2375		29.842	1.5873	1	14185000			27284	10091	18359	18369	30997;30998;30999;31000	30999					0.10160464770854105
LGLLLPQP	8	Unmodified	_LGLLLPQP_					0	0	0		ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.77484130859375	2	425.773471	849.53239	-0.11951	-5.0886E-05	3.5324	0.001504	3.4129	0.0014531	425.7748940405711	39.012	1.3083	38.959	38.379	39.687	-0.052731					144	37	5	0	0	0	0.83466	4	2378	2330;2358;2370;2378		31.579	1.3344	1	13488000			27285	10091	18359	18369	31001;31002;31003;31004	31004					0.10160464770854105
LGLLLPQP	8	Unmodified	_LGLLLPQP_					0	0	0		ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747497558594	2	425.773471	849.53239	0.348	0.00014817	2.8727	0.0012231	3.2207	0.0013713	425.77466249920843	37.645	1.0176	37.958	37.411	38.429	0.31312					95	25	5	0	0	0	0.83466	2	3025	3025;3037		23.037	0	1	45114000			27286	10091	18359	18369	31005;31006	31005					0.10160464770854105
LGLLLPQP	8	Unmodified	_LGLLLPQP_					0	0	0		ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.77459716796875	2	425.773471	849.53239	0.52804	0.00022483	2.6288	0.0011193	3.1568	0.0013441	425.7745403369288	37.544	1.064	38.03	37.492	38.556	0.48581					97	26	5	0	0	0	0.83466	3	3043	3019;3043;3068		29.842	1.5873	1	42348000			27287	10091	18359	18369	31007;31008;31009	31008					0.10160464770854105
LGLLLPQP	8	Unmodified	_LGLLLPQP_					0	0	0		ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	ENST00000328405.6_1_3:19189957-19190221:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7750244140625	2	425.773471	849.53239	-0.27567	-0.00011737	3.7288	0.0015876	3.4531	0.0014702	425.77498181524743	38.327	1.6801	38.849	38.513	40.193	0.52235					122	39	5	0	0	0	0.89457	1	3117	3117		37.028	7.1869	1	16884000			27288	10091	18359	18369	31010	31010					0.10160464770854105
LGLLLVLQFFF	11	Unmodified	_LGLLLVLQFFF_					0	0	0			REV__nc|ENSG00000167895|Q8IU68-2|TMC8	REV__nc|ENSG00000167895|Q8IU68-2|TMC8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2674865722656	3	437.268804	1308.78458	-1.7045	-0.00074531	-0.38375	-0.0001678	-2.0882	-0.00091311	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.76251	1	4350	4350		19.263	0.73163	1	3449100	+		27289	21435	18360	18370	31011	31011					0.14254058061555952
LGLLLVLQFFF	11	Unmodified	_LGLLLVLQFFF_					0	0	0			REV__nc|ENSG00000167895|Q8IU68-2|TMC8	REV__nc|ENSG00000167895|Q8IU68-2|TMC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26654052734375	3	437.268804	1308.78458	-1.5729	-0.00068777	-0.48003	-0.0002099	-2.0529	-0.00089767	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.76579	1	4238	4238		18.531	0	1	4358700	+		27290	21435	18360	18370	31012	31012					0.14254058061555952
LGLLLVLQFFF	11	Unmodified	_LGLLLVLQFFF_					0	0	0			REV__nc|ENSG00000167895|Q8IU68-2|TMC8	REV__nc|ENSG00000167895|Q8IU68-2|TMC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.60308837890625	3	437.268804	1308.78458	0.29718	0.00012995	-2.3878	-0.0010441	-2.0906	-0.00091417	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.76251	1	4289	4289		19.263	5.1767	1	4533800	+		27291	21435	18360	18370	31013	31013					0.14254058061555952
LGLLPAIAT	9	Unmodified	_LGLLPAIAT_					0	0	0		ENSG00000269113|ENST00000606738|TRABD2B	ENSG00000269113|ENST00000606738|TRABD2B	ENSG00000269113|ENST00000606738|TRABD2B	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801513671875	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.337	1	68.396	67.896	68.896	0.059288								0	0	0	0.2969	1	6124	6124		31.955	5.1588	1				27292	8967	18361	18371	31014	31014					0.10388447425293634
LGLLPKSP	8	Unmodified	_LGLLPKSP_					0	0	0			REV__ENSG00000158156|ENST00000373884|XKR8	REV__ENSG00000158156|ENST00000373884|XKR8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.265380859375	2	412.765646	823.516739	1.2445	0.00051368	-1.8023	-0.00074392	-0.55779	-0.00023024	412.76609709283645	41.289	1.0546	41.296	40.74	41.795	0.0065727					35	27	2	0	0	0	0.8347	1	3020	3020		23.042	1.3402	1	169780	+		27293	20591	18362	18372	31015	31015					0.0979217825380374
LGLLPKSP	8	Unmodified	_LGLLPKSP_					0	0	0			REV__ENSG00000158156|ENST00000373884|XKR8	REV__ENSG00000158156|ENST00000373884|XKR8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7666320800781	2	412.765646	823.516739	-1.9024	-0.00078523	4.0039	0.0016527	2.1015	0.00086745	412.7675544540149	40.173	1.81	40.179	39.296	41.106	0.0065002					141	57	4	0	0	0	0.92973	1	2479	2479		50.025	3.2581	1	726100	+		27294	20591	18362	18372	31016	31016					0.0979217825380374
LGLLPSLGV	9	Unmodified	_LGLLPSLGV_					0	0	0			REV__ENST00000372876.1_1_6:42712424-42712766:-|nuORF	REV__ENST00000372876.1_1_6:42712424-42712766:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77899169921875	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.69914	1	3500	3500		40.573	0	1	15771000	+		27295	25736	18363	18373	31017	31017					0.10388447425293634
LGLLRKGL	8	Unmodified	_LGLLRKGL_					0	0	0		ENST00000583277.1_1_17:7468610-7469096:+|nuORF	ENST00000583277.1_1_17:7468610-7469096:+|nuORF	ENST00000583277.1_1_17:7468610-7469096:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3001403808594	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.85228	1	7246	7246		10.185	0	1	1921500			27296	14120	18364	18374	31018	31018					0.14627262273359065
LGLLRKIRLWH	11	Unmodified	_LGLLRKIRLWH_					0	0	0		ENSG00000158683|ENST00000289672|PKD1L1;nc|ENSG00000158683|Q8TDX9-2|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.9700012207031	3	468.969863	1403.88776	0.068513	3.213E-05	2.2515	0.0010559	2.32	0.001088	468.9707934879958	48.712	1.6244	48.706	48.129	49.754	-0.0056419					103	36	4	0	0	0	0.80593	1	4001	4001		10.104	4.4051	1	665370			27297	5492	18365	18375	31019	31019					0.20196983292726145
LGLLRKIRLWH	11	Unmodified	_LGLLRKIRLWH_					0	0	0		ENSG00000158683|ENST00000289672|PKD1L1;nc|ENSG00000158683|Q8TDX9-2|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.9710388183594	3	468.969863	1403.88776	-0.32674	-0.00015323	2.8862	0.0013535	2.5594	0.0012003	468.97108105597175	48.857	1.6348	48.764	48.126	49.761	-0.093178					121	39	4	0	0	0	0.80361	1	3776	3776		10.587	0.4829	1	745890			27298	5492	18365	18375	31020	31020					0.20196983292726145
LGLLRRES	8	Unmodified	_LGLLRRES_					0	0	0			REV__ENST00000361922.8_1_19:35803216-35804354:+|nuORF	REV__ENST00000361922.8_1_19:35803216-35804354:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2876892089844	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.884	1	9959	9959		33.516	6.7195	1	40161000	+		27299	17562	18366	18376	31021	31021					0.0874858239999412
LGLLSETRVVK	11	Unmodified	_LGLLSETRVVK_					0	0	0			REV__ENSG00000144659|ENST00000650617|SLC25A38	REV__ENSG00000144659|ENST00000650617|SLC25A38	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2599182128906	3	405.587084	1213.73942	1.732	0.00070249	0.1767	7.1667E-05	1.9087	0.00077416	405.92160070893357	57.126	0.65971	57.16	56.795	57.455	0.033184					29	22	2	0	0	0	0.17294	1	5214	5214		9.6461	0	1	101730	+		27300	19905	18367	18377	31022	31022					0.14110207528347019
LGLLSLAR	8	Unmodified	_LGLLSLAR_					0	0	0			REV__nc|ENSG00000125505|Q96N66-3|MBOAT7	REV__nc|ENSG00000125505|Q96N66-3|MBOAT7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5923156738281	2	421.776545	841.538538	0.61867	0.00026094	0.44043	0.00018576	1.0591	0.0004467	421.77663431794883	51.693	0.4514	52.361	52.105	52.556	0.6673					17	10	2	0	0	0	0.4196	1	5133	5133		12.959	0	1	522140	+		27301	18648	18368	18378	31023	31023					0.1114298300237806
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77978515625	2	434.778754	867.542954	1.0211	0.00044394	2.4757	0.0010764	3.4967	0.0015203	434.77962104590523	33.405	1.0416	33.404	32.826	33.868	-0.0016365					60	24	3	0	0	0	0.7932	1	1990	1990		26.796	0	1	347080			27302	7968	18369	18379	31024	31024					0.10388447425293634
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77996826171875	2	434.778754	867.542954	1.0771	0.00046829	1.5251	0.00066307	2.6021	0.0011314	434.77937950289305	55.096	1.7211	55.123	54.502	56.224	0.027138					70	48	2	0	0	0	0.76996	1	4905	4905		33.516	0	1	299790			27303	7968	18369	18379	31025	31025					0.10388447425293634
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7806701660156	2	434.778754	867.542954	0.18498	8.0427E-05	2.9584	0.0012863	3.1434	0.0013667	434.7799222967292	39.501	1.6389	39.589	38.953	40.592	0.088375					151	45	4	0	0	0	0.7932	1	2552	2552		25.45	6.0902	1	4736600			27304	7968	18369	18379	31026	31026					0.10388447425293634
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7792663574219	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.7932	1	2598	2598		19.36	0	1	2513700			27305	7968	18369	18379	31027	31027					0.10388447425293634
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7798156738281	2	434.778754	867.542954	0.083396	3.6259E-05	3.2514	0.0014137	3.3348	0.0014499	434.78005466270537	34.317	1.0002	34.271	33.763	34.763	-0.045815					125	41	4	0	0	0	0.7932	1	1695	1695		19.36	0	1	3033400			27306	7968	18369	18379	31028	31028					0.10388447425293634
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7792053222656	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.76402	2	2642	2583;2642		35.201	0	1	2793300			27307	7968	18369	18379	31029;31030	31030					0.10388447425293634
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	434.778754	867.542954	-0.89312	-0.00038831	3.6526	0.0015881	2.7595	0.0011998	434.7802679041939	61.693	0.95562	61.709	61.315	62.27	0.015724					65	41	2	0	0	0	0.7932	1	5374	5374		25.45	0	1	303610			27308	7968	18369	18379	31031	31031					0.10388447425293634
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77862548828125	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.78851	1	3507	3507		28.254	1.4582	1	17256000			27309	7968	18369	18379	31032	31032					0.10388447425293634
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.7932	1	2463	2463		25.45	0	1	7451800			27310	7968	18369	18379	31033	31033					0.10388447425293634
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.6545	-0.00071936	4.7413	0.0020614	3.0867	0.001342	434.7806846505937	55.499	1.6159	55.499	54.763	56.379	0	0.22223	0.0012359	NaN	33.516	106	53	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	179530			27311	7968	18369	18379							0.10388447425293634
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.778754	867.542954	-1.6148	-0.00070207	4.6226	0.0020098	3.0079	0.0013078	434.7806527182076	55.159	2.081	55.223	54.317	56.398	0.063725	-0.053941	0.0011327	NaN	33.516	160	79	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	402350			27312	7968	18369	18379							0.10388447425293634
LGLLSLPGV	9	Unmodified	_LGLLSLPGV_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	434.778754	867.542954	0.16347	7.1071E-05	2.9558	0.0012851	3.1193	0.0013562	434.7799232585467	55.015	1.8617	55.418	54.568	56.43	0.40229	0.14065	-0.00031665	NaN	33.516	76	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	233420			27313	7968	18369	18379							0.10388447425293634
LGLLSLPP	8	Unmodified	_LGLLSLPP_					0	0	0		ENST00000586443.1_1_17:42429890-42430163:+|nuORF	ENST00000586443.1_1_17:42429890-42430163:+|nuORF	ENST00000586443.1_1_17:42429890-42430163:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.89898681640625	2	405.260197	808.50584	0.39291	0.00015923	2.9334	0.0011888	3.3263	0.001348	405.26123060071075	62.951	0.18151	63.074	62.951	63.133	0.12252					12	7	2	0	0	0	0.4196	1	5504	5504		15.636	0	1	61118			27314	14167	18370	18380	31034	31034					0.09392775879518922
LGLLSPLIS	9	Unmodified	_LGLLSPLIS_					0	0	0			REV__ENSG00000171135|ENST00000647897|JAGN1	REV__ENSG00000171135|ENST00000647897|JAGN1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7915954589844	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.772	1	52.772	52.272	53.272	0								0	0	0	0.27974	1	4347	4347		38.806	1.647	1		+		27315	21716	18371	18381	31035	31035					0.10984716596760791
LGLLTGILE	9	Unmodified	_LGLLTGILE_					0	0	0		nc|ENSG00000169180|Q96QU8-2|XPO6;ENSG00000169180|ENST00000304658|XPO6	nc|ENSG00000169180|Q96QU8-2|XPO6	nc|ENSG00000169180|Q96QU8-2|XPO6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7908020019531	2	464.789318	927.564084	-1.1356	-0.00052781	3.8995	0.0018125	2.764	0.0012847	464.7910242247121	36.975	1.5496	36.999	36.145	37.695	0.023624					81	41	3	0	0	0	0.7932	1	2068	2068		24.203	0	1	297830			27316	6476	18372	18382	31036	31036					0.0974041273415196
LGLLVLLPIT	10	Unmodified	_LGLLVLLPIT_					0	0	0			REV__ENST00000477401.5_1_7:14660999-14880939:-|nuORF	REV__ENST00000477401.5_1_7:14660999-14880939:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3600463867188	2	526.359911	1050.70527	-1.5676	-0.00082514	3.904	0.0020549	2.3364	0.0012298	526.3617973555264	35.031	1.6441	35.031	34.615	36.259	0					148	43	4	0	0	0	0.84874	1	2037	2037		18.324	0	1	1307600	+		27317	15903	18373	18383	31037	31037					0.1819441110740172
LGLLVLLPIT	10	Unmodified	_LGLLVLLPIT_					0	0	0			REV__ENST00000477401.5_1_7:14660999-14880939:-|nuORF	REV__ENST00000477401.5_1_7:14660999-14880939:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.361083984375	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.84874	1	1830	1830		18.324	1.8513	1	1221500	+		27318	15903	18373	18383	31038	31038					0.1819441110740172
LGLLVPLAS	9	Unmodified	_LGLLVPLAS_					0	0	0		ENST00000288699.10_1_2:27170417-27170630:+|nuORF	ENST00000288699.10_1_2:27170417-27170630:+|nuORF	ENST00000288699.10_1_2:27170417-27170630:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.78826904296875	2	441.786579	881.558604	-1.2332	-0.00054481	3.5907	0.0015863	2.3575	0.0010415	441.7880163081002	41.793	3.3981	41.755	40.553	43.951	-0.038223					227	85	5	0	0	0	0.49378	1	3121	3121		52.299	7.7681	1	13573000			27319	9665	18374	18384	31039	31039					0.11308733942314575
LGLLVPLAS	9	Unmodified	_LGLLVPLAS_					0	0	0		ENST00000288699.10_1_2:27170417-27170630:+|nuORF	ENST00000288699.10_1_2:27170417-27170630:+|nuORF	ENST00000288699.10_1_2:27170417-27170630:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7881164550781	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.7932	3	3316	3292;3316;3385		26.796	7.4361	1	4170800			27320	9665	18374	18384	31040;31041;31042	31041					0.11308733942314575
LGLLWPGPI	9	Unmodified	_LGLLWPGPI_					0	0	0			REV__ENST00000565686.1_1_15:76050816-76050969:+|nuORF	REV__ENST00000565686.1_1_15:76050816-76050969:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.2375793457031	2	483.294571	964.574589	-2.8888	-0.0013962	2.2462	0.0010856	-0.6426	-0.00031057	483.2948794809481	39.869	0.17032	39.878	39.815	39.986	0.0092773					5	3	2	0	0	0	0.20789	1	2825	2825		29.842	1.5873	1	15549	+		27321	28858	18375	18385	31043	31043					0.09088440179220925
LGLLYFIRRG	10	Unmodified	_LGLLYFIRRG_					0	0	0		ENST00000457307.1_1_20:43994210-43995752:+|nuORF;ENSG00000204070|ENST00000243918|SYS1	ENST00000457307.1_1_20:43994210-43995752:+|nuORF	ENST00000457307.1_1_20:43994210-43995752:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3668212890625	2	604.369133	1206.72371	-1.2751	-0.00077064	-2.39	-0.0014444	-3.6651	-0.0022151	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.8488	1	12642	12642		17.365	1.7232	1	3346600			27322	8409	18376	18386	31044	31044					0.12861965801971564
LGLLYTAGT	9	Unmodified	_LGLLYTAGT_					0	0	0		ENSG00000153230|ENST00000283225|OR14K1	ENSG00000153230|ENST00000283225|OR14K1	ENSG00000153230|ENST00000283225|OR14K1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.2269592285156	2	454.758018	907.501483	0.41503	0.00018874	-1.2524	-0.00056952	-0.83733	-0.00038078	454.7553557545926	79.816	0.96478	79.87	79.129	80.094	0.053841					49	32	2	0	0	0	0.20789	1	7894	7894		11.511	0	1	43704			27323	5223	18377	18387	31045	31045					0.04403266665940464
LGLLYTAGT	9	Unmodified	_LGLLYTAGT_					0	0	0		ENSG00000153230|ENST00000283225|OR14K1	ENSG00000153230|ENST00000283225|OR14K1	ENSG00000153230|ENST00000283225|OR14K1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	454.758018	907.501483	0.19256	8.7567E-05	-1.6589	-0.00075442	-1.4664	-0.00066685	454.7553439552721	79.813	0.65603	79.757	79.327	79.983	-0.056503	-0.056515	-0.00019074	NaN	6.7355	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33564			27324	5223	18377	18387							0.04403266665940464
LGLNGGHVMEL	11	Unmodified	_LGLNGGHVMEL_					0	0	0			REV__ENST00000513882.5_1_5:16916230-16916293:-|nuORF	REV__ENST00000513882.5_1_5:16916230-16916293:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.2945556640625	2	570.297516	1138.58048	-0.46386	-0.00026454	-2.9548	-0.0016851	-3.4186	-0.0019496	570.2956874292098	62.034	0.54156	62.05	61.764	62.306	0.015724					47	20	3	0	0	0	0.33509	2	5407	5407;5418		65.465	1.2581	1	694080	+		27325	27999	18378	18388	31046;31047	31046					0.016731706286009285
LGLPALGAL	9	Unmodified	_LGLPALGAL_					0	0	0		ENST00000406733.1_1_22:47169950-47170061:+|nuORF	ENST00000406733.1_1_22:47169950-47170061:+|nuORF	ENST00000406733.1_1_22:47169950-47170061:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2666015625	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.78292	1	2682	2682		29.842	0	1	795210			27326	11274	18379	18389	31048	31048					0.09792178253815109
LGLPALGAL	9	Unmodified	_LGLPALGAL_					0	0	0		ENST00000406733.1_1_22:47169950-47170061:+|nuORF	ENST00000406733.1_1_22:47169950-47170061:+|nuORF	ENST00000406733.1_1_22:47169950-47170061:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.267578125	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.72098	1	2712	2712		39.021	9.18	1	669780			27327	11274	18379	18389	31049	31049					0.09792178253815109
LGLPALGAL	9	Unmodified	_LGLPALGAL_					0	0	0		ENST00000406733.1_1_22:47169950-47170061:+|nuORF	ENST00000406733.1_1_22:47169950-47170061:+|nuORF	ENST00000406733.1_1_22:47169950-47170061:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76739501953125	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.277	1	37.377	36.877	37.877	0.099277								0	0	0	0.30219	1	2126	2126		29.842	0	1				27328	11274	18379	18389	31050	31050					0.09792178253815109
LGLPALGAL	9	Unmodified	_LGLPALGAL_					0	0	0		ENST00000406733.1_1_22:47169950-47170061:+|nuORF	ENST00000406733.1_1_22:47169950-47170061:+|nuORF	ENST00000406733.1_1_22:47169950-47170061:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76678466796875	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.042	1	38.136	37.636	38.636	0.094322								0	0	0	0.32542	1	2227	2227		21.702	0	1				27329	11274	18379	18389	31051	31051					0.09792178253815109
LGLPALGAL	9	Unmodified	_LGLPALGAL_					0	0	0		ENST00000406733.1_1_22:47169950-47170061:+|nuORF	ENST00000406733.1_1_22:47169950-47170061:+|nuORF	ENST00000406733.1_1_22:47169950-47170061:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.76715087890625	2	412.765646	823.516739	1.2585	0.00051947	2.4286	0.0010024	3.6871	0.0015219	412.7665201070099	37.01	2.3211	37.292	35.703	38.024	0.28173					152	57	4	0	0	0	0.7932	1	2893	2893		21.702	0	1	3102100			27330	11274	18379	18389	31052	31052					0.09792178253815109
LGLPGLALA	9	Unmodified	_LGLPGLALA_					0	0	0		ENSG00000172817|ENST00000310193|CYP7B1	ENSG00000172817|ENST00000310193|CYP7B1	ENSG00000172817|ENST00000310193|CYP7B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2672119140625	2	412.765646	823.516739	-1.9024	-0.00078523	4.0039	0.0016527	2.1015	0.00086745	412.7675544540149	40.173	1.81	40.179	39.296	41.106	0.0065002					141	57	4	0	0	0	0.72098	1	2401	2401		39.021	0	1	726100			27331	6796	18380	18390	31053	31053					0.0979217825380374
LGLPGLALA	9	Unmodified	_LGLPGLALA_					0	0	0		ENSG00000172817|ENST00000310193|CYP7B1	ENSG00000172817|ENST00000310193|CYP7B1	ENSG00000172817|ENST00000310193|CYP7B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7677307128906	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.7932	1	2862	2862		21.702	0	1	669780			27332	6796	18380	18390	31054	31054					0.0979217825380374
LGLPGLALA	9	Unmodified	_LGLPGLALA_					0	0	0		ENSG00000172817|ENST00000310193|CYP7B1	ENSG00000172817|ENST00000310193|CYP7B1	ENSG00000172817|ENST00000310193|CYP7B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76702880859375	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.7932	1	2163	2163		21.702	0	1	1619400			27333	6796	18380	18390	31055	31055					0.0979217825380374
LGLPITDE	8	Unmodified	_LGLPITDE_					0	0	0		nc|ENSG00000239900|P30566-2|ADSL;ENSG00000239900|ENST00000623063|ADSL	nc|ENSG00000239900|P30566-2|ADSL	nc|ENSG00000239900|P30566-2|ADSL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.23541259765625	2	429.234376	856.454199	0.92963	0.00039903	2.1115	0.00090634	3.0411	0.0013054	429.2351427168519	63.189	2.3191	63.218	62.635	64.954	0.028133					251	82	4	0	0	0	0.87276	1	5900	5900		29.842	4.3914	1	5799800			27334	8774	18381	18391	31056	31056					0.02022987394957454
LGLPKLLE	8	Unmodified	_LGLPKLLE_					0	0	0			REV__nc|ENSG00000129071|O95243-6|MBD4	REV__nc|ENSG00000129071|O95243-6|MBD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7877197265625	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.81724	1	3139	3139		14.664	0	1	403970	+		27335	18804	18382	18392	31057	31057					0.11308733942337312
LGLPLATAL	9	Unmodified	_LGLPLATAL_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7802429199219	2	434.778754	867.542954	0.13638	5.9295E-05	3.2501	0.0014131	3.3864	0.0014724	434.7800361226264	34.243	0.88012	34.352	33.821	34.701	0.10829					118	39	4	0	0	0	0.5393	1	1760	1760		50.025	7.5501	1	2838300			27336	6949	18383	18393	31058	31058					0.10388447425270897
LGLPLATAL	9	Unmodified	_LGLPLATAL_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7802734375	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.69914	1	1850	1850		40.573	8.6178	1	2251100			27337	6949	18383	18393	31059	31059					0.10388447425270897
LGLPLATAL	9	Unmodified	_LGLPLATAL_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.7932	1	2861	2861		26.796	1.3459	1	2537300			27338	6949	18383	18393	31060	31060					0.10388447425270897
LGLPLATAL	9	Unmodified	_LGLPLATAL_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7803039550781	2	434.778754	867.542954	0.083396	3.6259E-05	3.2514	0.0014137	3.3348	0.0014499	434.78005466270537	34.317	1.0002	34.271	33.763	34.763	-0.045815					125	41	4	0	0	0	0.67235	1	1733	1733		42.474	8.9589	1	3033400			27339	6949	18383	18393	31061	31061					0.10388447425270897
LGLPLATAL	9	Unmodified	_LGLPLATAL_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7794494628906	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.7932	1	1864	1864		25.45	4.9683	1	2158200			27340	6949	18383	18393	31062	31062					0.10388447425270897
LGLPLATAL	9	Unmodified	_LGLPLATAL_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7796630859375	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.7932	1	1971	1971		19.36	1.0356	1	4750000			27341	6949	18383	18393	31063	31063					0.10388447425270897
LGLPLATAL	9	Unmodified	_LGLPLATAL_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7782897949219	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.76996	2	2591	2591;2798		33.516	8.0654	1	2793300			27342	6949	18383	18393	31064;31065	31064					0.10388447425270897
LGLPLATAL	9	Unmodified	_LGLPLATAL_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77996826171875	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.7932	1	3586	3586		26.796	0	1	2175000			27343	6949	18383	18393	31066	31066					0.10388447425270897
LGLPLATAL	9	Unmodified	_LGLPLATAL_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7799072265625	2	434.778754	867.542954	-0.97799	-0.00042521	2.2819	0.00099211	1.3039	0.0005669	434.7796012796187	43.693	1.006	44.143	43.436	44.442	0.45024					66	24	3	0	0	0	0.7932	1	3867	3867		26.796	1.3459	1	2290300			27344	6949	18383	18393	31067	31067					0.10388447425270897
LGLPLATAL	9	Unmodified	_LGLPLATAL_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.9628	-0.00085337	5.3082	0.0023079	3.3455	0.0014545	434.78096562096533	34.458	0.86573	34.458	33.927	34.793	0	0.066142	0.0017453	NaN	50.025	83	23	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2617000			27345	6949	18383	18393							0.10388447425270897
LGLPLATAL	9	Unmodified	_LGLPLATAL_					0	0	0		nc|ENSG00000174600|Q99788-2|CMKLR1;ENSG00000174600|ENST00000550402|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	nc|ENSG00000174600|Q99788-2|CMKLR1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.778754	867.542954	-1.6531	-0.00071875	5.0529	0.0021969	3.3998	0.0014781	434.7808336047868	34.381	0.83418	34.419	33.957	34.791	0.038643	0.027608	0.0015233	NaN	50.025	118	36	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2732300			27346	6949	18383	18393							0.10388447425270897
LGLPLLVIIT	10	Unmodified	_LGLPLLVIIT_					0	0	0		ENSG00000235750|ENST00000423313|KIAA0040	ENSG00000235750|ENST00000423313|KIAA0040	ENSG00000235750|ENST00000423313|KIAA0040	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3603515625	2	526.359911	1050.70527	-0.2233	-0.00011753	2.7139	0.0014285	2.4906	0.0013109	526.3612023516472	37.188	2.125	37.212	36.022	38.147	0.023624					163	60	4	0	0	0	0.88541	1	2172	2172		11.511	0	1	1504200			27347	8751	18384	18394	31068	31068					0.1819441110740172
LGLPLMRQV	9	Unmodified	_LGLPLMRQV_					0	0	0		ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087768554688	2	513.810062	1025.60557	-1.4174	-0.00072826	-0.72923	-0.00037469	-2.1466	-0.0011029	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.7932	1	4080	4080		24.203	0	1	1977600			27348	3698	18385	18395	31069	31069					0.09379270221802471
LGLPLMRQV	9	Unmodified	_LGLPLMRQV_					0	0	0		ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.808837890625	2	513.810062	1025.60557	0.034734	1.7846E-05	-2.0578	-0.0010573	-2.0231	-0.0010395	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.69914	1	4486	4486		40.573	7.057	1	666950			27349	3698	18385	18395	31070	31070					0.09379270221802471
LGLPLTGVV	9	Unmodified	_LGLPLTGVV_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.779541015625	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.78851	1	3533	3533		28.254	1.4582	1	2364100	+		27350	21676	18386	18396	31071	31071					0.10388447425293634
LGLPLTGVV	9	Unmodified	_LGLPLTGVV_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7797546386719	2	434.778754	867.542954	0.3261	0.00014178	2.4294	0.0010563	2.7555	0.0011981	434.77975339221	54.99	1.8925	55.081	54.473	56.365	0.091167					101	62	2	0	0	0	0.76996	1	4533	4533		33.516	0	1	456330	+		27351	21676	18386	18396	31072	31072					0.10388447425293634
LGLPMAPGPL	10	Unmodified	_LGLPMAPGPL_					0	0	0		ENST00000370449.8_1_10:101544429-101544489:+|nuORF	ENST00000370449.8_1_10:101544429-101544489:+|nuORF	ENST00000370449.8_1_10:101544429-101544489:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.2797546386719	2	483.278063	964.541574	-0.69726	-0.00033697	2.2408	0.0010829	1.5435	0.00074595	483.2791425455724	95.175	1.9923	95.222	94.662	96.654	0.046982					116	46	3	0	0	0	0.85976	1	10153	10153		35.201	3.2459	1	1260700			27352	10636	18387	18397	31073	31073					0.05788490064878715
LGLPPPTL	8	Unmodified	_LGLPPPTL_					0	0	0			REV__ENST00000538079.1_1_12:6882155-6887174:+|nuORF	REV__ENST00000538079.1_1_12:6882155-6887174:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2324523925781	2	404.252372	806.49019	-1.2689	-0.00051297	-2.2896	-0.00092556	-3.5585	-0.0014385	404.2513599783938	82.018	0.96973	82.018	81.549	82.519	0					36	25	2	0	0	0	0.4196	1	7676	7676		3.9852	0.30089	1	55100	+		27353	28432	18388	18398	31074	31074					0.0792048936248193
LGLPPPTL	8	Unmodified	_LGLPPPTL_					0	0	0			REV__ENST00000538079.1_1_12:6882155-6887174:+|nuORF	REV__ENST00000538079.1_1_12:6882155-6887174:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	404.252372	806.49019	2.6854	0.0010856	-7.0886	-0.0028656	-4.4032	-0.00178	404.2497909767978	81.78	1.0016	81.837	81.599	82.601	0.057816	-0.13448	-0.0028715	NaN	3.9852	41	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73446	+		27354	28432	18388	18398							0.0792048936248193
LGLPVSLLT	9	Unmodified	_LGLPVSLLT_					0	0	0		ENSG00000257008|ENST00000582579|GPR142;nc|ENSG00000257008|Q7Z601|GPR142	ENSG00000257008|ENST00000582579|GPR142	ENSG00000257008|ENST00000582579|GPR142	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7920837402344	2	456.791861	911.569169	-0.051128	-2.3355E-05	1.9525	0.00089189	1.9014	0.00086853	456.79265367527273	40.074	1.5514	40.027	39.34	40.891	-0.04789					131	49	4	0	0	0	0.72402	1	2509	2509		38.806	6.8513	1	940180			27355	8903	18389	18399	31075	31075					0.10984716596760791
LGLPVSLTL	9	Unmodified	_LGLPVSLTL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2;nc|ENSG00000136381|P48200-2|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7931213378906	2	456.791861	911.569169	0.050318	2.2985E-05	2.6739	0.0012214	2.7242	0.0012444	456.7929831409672	38.348	1.1506	38.32	37.435	38.586	-0.027843					79	26	4	0	0	0	0.72402	1	2550	2550		38.806	0	1	1618700			27356	4108	18390	18400	31076	31076					0.10984716596760791
LGLPVSLTL	9	Unmodified	_LGLPVSLTL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2;nc|ENSG00000136381|P48200-2|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7930908203125	2	456.791861	911.569169	-1.4135	-0.00064567	2.5195	0.0011509	1.106	0.00050522	456.7928761630725	39.835	2.0275	40.401	39.33	41.358	0.56588					154	50	4	0	0	0	0.77546	1	3326	3326		31.955	0	1	4024400			27357	4108	18390	18400	31077	31077					0.10984716596760791
LGLPWLRIIA	10	Unmodified	_LGLPWLRIIA_					0	0	0			REV__nc|ENSG00000278259|Q96H55-4|MYO19	REV__nc|ENSG00000278259|Q96H55-4|MYO19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.3697509765625	2	576.368601	1150.72265	-0.011654	-6.7168E-06	1.0363	0.00059732	1.0247	0.0005906	576.3690257397874	49.416	2.2394	49.419	48.532	50.772	0.0025635					101	52	3	0	0	0	0.85939	1	4157	4157		23.042	3.6825	1	230020	+		27358	24033	18391	18401	31078	31078					0.15331751433086538
LGLPWLRIIA	10	Unmodified	_LGLPWLRIIA_					0	0	0			REV__nc|ENSG00000278259|Q96H55-4|MYO19	REV__nc|ENSG00000278259|Q96H55-4|MYO19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3699340820312	2	576.368601	1150.72265	-0.0032095	-1.8498E-06	1.1259	0.00064892	1.1227	0.00064707	576.3691255987982	49.503	2.0721	49.41	48.483	50.555	-0.093182					130	52	3	0	0	0	0.85438	2	3837	3796;3837		29.15	8.6677	1	379010	+		27359	24033	18391	18401	31079;31080	31080					0.15331751433086538
LGLPWLRIIA	10	Unmodified	_LGLPWLRIIA_					0	0	0			REV__nc|ENSG00000278259|Q96H55-4|MYO19	REV__nc|ENSG00000278259|Q96H55-4|MYO19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3688354492188	2	576.368601	1150.72265	-0.050615	-2.9173E-05	1.5133	0.0008722	1.4627	0.00084303	576.3693955908053	50.925	1.1269	50.833	50.377	51.504	-0.091793					52	31	2	0	0	0	0.85438	1	3988	3988		16.473	0	1	184910	+		27360	24033	18391	18401	31081	31081					0.15331751433086538
LGLPWLRIIA	10	Unmodified	_LGLPWLRIIA_					0	0	0			REV__nc|ENSG00000278259|Q96H55-4|MYO19	REV__nc|ENSG00000278259|Q96H55-4|MYO19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.369384765625	2	576.368601	1150.72265	-0.74314	-0.00042832	2.2532	0.0012986	1.51	0.00087033	576.3696767962949	37.867	1.5412	38.18	37.746	39.287	0.31312					100	38	4	0	0	0	0.85939	1	3107	3107		23.042	3.0457	1	2629900	+		27361	24033	18391	18401	31082	31082					0.15331751433086538
LGLPWLRIIA	10	Unmodified	_LGLPWLRIIA_					0	0	0			REV__nc|ENSG00000278259|Q96H55-4|MYO19	REV__nc|ENSG00000278259|Q96H55-4|MYO19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3671875	2	576.368601	1150.72265	-2.5571	-0.0014738	1.6995	0.00097954	-0.85763	-0.00049431	576.3693880247914	40.386	2.6783	40.778	38.947	41.625	0.39209					154	68	5	0	0	0	0.86201	1	3479	3479		24.203	1.1603	1	8015200	+		27362	24033	18391	18401	31083	31083					0.15331751433086538
LGLPWLRIIA	10	Unmodified	_LGLPWLRIIA_					0	0	0			REV__nc|ENSG00000278259|Q96H55-4|MYO19	REV__nc|ENSG00000278259|Q96H55-4|MYO19	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	576.368601	1150.72265	-0.87652	-0.0005052	2.3384	0.0013478	1.4619	0.00084259	576.3698349931318	50.574	1.7444	50.572	49.913	51.657	-0.0020447	-0.16906	0.00057558	NaN	16.473	90	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135370	+		27363	24033	18391	18401							0.15331751433086538
LGLPWLRIIA	10	Unmodified	_LGLPWLRIIA_					0	0	0			REV__nc|ENSG00000278259|Q96H55-4|MYO19	REV__nc|ENSG00000278259|Q96H55-4|MYO19	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	576.368601	1150.72265	-0.44522	-0.00025661	1.7963	0.0010354	1.3511	0.00077874	576.3694194167308	50.857	1.2248	50.834	50.384	51.609	-0.02343	0.092392	-4.929E-05	NaN	16.473	55	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128600	+		27364	24033	18391	18401							0.15331751433086538
LGLPWLRIIA	10	Unmodified	_LGLPWLRIIA_					0	0	0			REV__nc|ENSG00000278259|Q96H55-4|MYO19	REV__nc|ENSG00000278259|Q96H55-4|MYO19	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	576.368601	1150.72265	0.53961	0.00031101	0.9842	0.00056726	1.5238	0.00087827	576.3690921706873	50.696	1.1349	50.726	50.185	51.32	0.029629	-0.015433	-0.00098548	NaN	16.473	60	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156520	+		27365	24033	18391	18401							0.15331751433086538
LGLQFLHEKKI	11	Unmodified	_LGLQFLHEKKI_					0	0	0		ENSG00000160447|ENST00000291906|PKN3	ENSG00000160447|ENST00000291906|PKN3	ENSG00000160447|ENST00000291906|PKN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.6011657714844	3	442.602845	1324.78671	-0.15208	-6.7312E-05	-3.9225	-0.0017361	-4.0746	-0.0018034	442.6010716654733	103.97	1.4842	103.96	103.51	105	-0.0035706					84	35	4	0	0	0	0.74771	1	11257	11257		22.562	3.2989	1	603650			27366	5589	18392	18402	31084	31084					0.13730486799363462
LGLQVHWLSVM	11	Unmodified	_LGLQVHWLSVM_					0	0	0			REV__ENST00000556029.5_2_12:98941636-98941723:+|nuORF	REV__ENST00000556029.5_2_12:98941636-98941723:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.359619140625	2	641.852458	1281.69036	7.1265	0.0045742	3.9801	0.0025546	11.107	0.0071288	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.63176	1	13809	13809		40.778	4.3314	1	98705	+		27367	28691	18393	18403	31085	31085					0.06078595967755973
LGLQVKNDN	9	Unmodified	_LGLQVKNDN_					0	0	0		chr5:139360109-139363759|23|15.22|0.83|4.2|+|0|TE_info:AluSx4,AluSx4_dup3468,Alu,SINE,donor,-,139359964,139360109|None,PAIP2|3	chr5:139360109-139363759|23|15.22|0.83|4.2|+|0|TE_info:AluSx4,AluSx4_dup3468,Alu,SINE,donor,-,139359964,139360109|None,PAIP2|3	chr5:139360109-139363759|23|15.22|0.83|4.2|+|0|TE_info:AluSx4,AluSx4_dup3468,Alu,SINE,donor,-,139359964,139360109|None,PAIP2|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.7738952636719	2	500.774731	999.534909	0.35117	0.00017586	-0.43768	-0.00021918	-0.086516	-4.3325E-05	500.77440458512547	50.648	0.53051	50.698	50.372	50.903	0.049896					40	17	3	0	0	0	0.76255	1	3995	3995		35.618	5.1146	1	218880			27368	441	18394	18404	31086	31086					0.035122684378507074
LGLRGDRN	8	Unmodified	_LGLRGDRN_					0	0	0			REV__ENST00000543187.5_1_12:7168132-7170034:+|nuORF	REV__ENST00000543187.5_1_12:7168132-7170034:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.75567626953125	2	450.754133	899.493713	0.36741	0.00016561	0.13246	5.9707E-05	0.49987	0.00022532	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.93786	1	8059	8059		53.351	2.016	1	394230	+		27369	27601	18395	18405	31087	31087					0.03994552189044498
LGLRGDRN	8	Unmodified	_LGLRGDRN_					0	0	0			REV__ENST00000543187.5_1_12:7168132-7170034:+|nuORF	REV__ENST00000543187.5_1_12:7168132-7170034:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7544250488281	2	450.754133	899.493713	0.64847	0.0002923	-0.5493	-0.0002476	0.099173	4.4703E-05	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.93293	1	7798	7798		51.335	12.529	1	162850	+		27370	27601	18395	18405	31088	31088					0.03994552189044498
LGLRGGQVGR	10	Unmodified	_LGLRGGQVGR_					0	0	0		ENST00000259006.7_2_17:61775806-61775887:-|nuORF	ENST00000259006.7_2_17:61775806-61775887:-|nuORF	ENST00000259006.7_2_17:61775806-61775887:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.800537109375	2	506.804157	1011.59376	-1.4266	-0.00072302	-3.9261	-0.0019897	-5.3527	-0.0027128	506.8022071365967	51.979	1.1494	51.979	51.46	52.609	0					48	30	2	0	0	0	0.86589	1	4286	4286		29.15	0.89528	1	87647			27371	9376	18396	18406	31089	31089					0.08842789522873318
LGLRKVGW	8	Unmodified	_LGLRKVGW_					0	0	0		ENSG00000182446|ENST00000331134|NPLOC4;nc|ENSG00000182446|Q8TAT6-2|NPLOC4	ENSG00000182446|ENST00000331134|NPLOC4	ENSG00000182446|ENST00000331134|NPLOC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.78900146484375	2	464.789987	927.565421	0.17035	7.9177E-05	1.4022	0.00065173	1.5725	0.0007309	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.89457	1	1777	1777		37.028	1.4102	1	283920			27372	7455	18397	18407	31090	31090					0.09874091613562541
LGLRRGIEAKS	11	Unmodified	_LGLRRGIEAKS_					0	0	0			REV__ENSG00000221944|ENST00000408957|TIGD1	REV__ENSG00000221944|ENST00000408957|TIGD1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5791015625	3	400.578811	1198.7146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.09	1	118.12	117.62	118.62	0.026466								0	0	0	0.56276	1	12989	12989		25.892	3.3121	1		+		27373	23717	18398	18408	31091	31091					0.12319572445653648
LGLRRPNRGAR	11	Unmodified	_LGLRRPNRGAR_					0	0	0		ENST00000445369.2_1_16:3063106-3063379:+|nuORF	ENST00000445369.2_1_16:3063106-3063379:+|nuORF	ENST00000445369.2_1_16:3063106-3063379:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.59234619140625	3	422.593566	1264.75887	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.423	1	53.418	52.918	53.918	-0.0053711								0	0	0	0.56276	1	4669	4669		29.551	4.4248	1				27374	11823	18399	18409	31092	31092					0.13708021382512925
LGLRRPNRGAR	11	Unmodified	_LGLRRPNRGAR_					0	0	0		ENST00000445369.2_1_16:3063106-3063379:+|nuORF	ENST00000445369.2_1_16:3063106-3063379:+|nuORF	ENST00000445369.2_1_16:3063106-3063379:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5927734375	3	422.593566	1264.75887	-1.8082	-0.00076411	-0.73868	-0.00031216	-2.5468	-0.0010763	422.5931690145651	56.763	1.1935	56.835	56.503	57.696	0.071835					118	57	3	0	0	0	0.71803	1	4798	4798		28.577	9.6104	1	582700			27375	11823	18399	18409	31093	31093					0.13708021382512925
LGLRRPNRGAR	11	Unmodified	_LGLRRPNRGAR_					0	0	0		ENST00000445369.2_1_16:3063106-3063379:+|nuORF	ENST00000445369.2_1_16:3063106-3063379:+|nuORF	ENST00000445369.2_1_16:3063106-3063379:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.591796875	3	422.593566	1264.75887	0.33778	0.00014274	-2.7713	-0.0011711	-2.4335	-0.0010284	422.5923327549996	56.605	1.259	56.704	56.541	57.8	0.099186					96	58	2	0	0	0	0.74405	1	4786	4786		23.378	3.3474	1	698260			27376	11823	18399	18409	31094	31094					0.13708021382512925
LGLSAIYLLFR	11	Unmodified	_LGLSAIYLLFR_					0	0	0			REV__ENST00000261721.8_1_15:83686463-83686517:-|nuORF	REV__ENST00000261721.8_1_15:83686463-83686517:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5924987792969	3	422.592058	1264.75434	2.1003	0.00088759	-0.63335	-0.00026765	1.467	0.00061994	422.59169327867005	49.208	2.7795	49.208	47.99	50.769	0.00016785					227	65	5	0	0	0	0.67041	1	4240	4240		36.318	0	1	2361900	+		27377	24401	18400	18410	31095	31095					0.13255699396358978
LGLSAIYLLFR	11	Unmodified	_LGLSAIYLLFR_					0	0	0			REV__ENST00000261721.8_1_15:83686463-83686517:-|nuORF	REV__ENST00000261721.8_1_15:83686463-83686517:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.59271240234375	3	422.592058	1264.75434	-1.8148	-0.00076692	3.1159	0.0013168	1.3011	0.00054985	422.59329421382927	53.398	1.1926	53.446	52.625	53.817	0.047802					97	42	3	0	0	0	0.74022	1	4345	4345		24.232	3.1996	1	149080	+		27378	24401	18400	18410	31096	31096					0.13255699396358978
LGLSAIYLLFR	11	Unmodified	_LGLSAIYLLFR_					0	0	0			REV__ENST00000261721.8_1_15:83686463-83686517:-|nuORF	REV__ENST00000261721.8_1_15:83686463-83686517:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5923156738281	3	422.592058	1264.75434	-1.8059	-0.00076316	3.1955	0.0013504	1.3896	0.00058725	422.5932330431751	57.933	1.2573	58.013	57.628	58.885	0.079643					127	59	3	0	0	0	0.76251	1	4904	4904		19.263	2.0959	1	268900	+		27379	24401	18400	18410	31097	31097					0.13255699396358978
LGLSAIYLLFR	11	Unmodified	_LGLSAIYLLFR_					0	0	0			REV__ENST00000261721.8_1_15:83686463-83686517:-|nuORF	REV__ENST00000261721.8_1_15:83686463-83686517:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.9271545410156	3	422.592058	1264.75434	0.33778	0.00014274	0.79818	0.0003373	1.136	0.00048005	422.5923327549996	56.605	1.259	56.704	56.541	57.8	0.099186					96	58	2	0	0	0	0.70584	1	4793	4793		30.569	5.4429	1	698260	+		27380	24401	18400	18410	31098	31098					0.13255699396358978
LGLSAIYLLFR	11	Unmodified	_LGLSAIYLLFR_					0	0	0			REV__ENST00000261721.8_1_15:83686463-83686517:-|nuORF	REV__ENST00000261721.8_1_15:83686463-83686517:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5926208496094	3	422.592058	1264.75434	-0.769	-0.00032497	2.0068	0.00084804	1.2378	0.00052307	422.5927811733958	56.589	1.3448	56.562	56.404	57.748	-0.026108					132	66	3	0	0	0	0.71207	1	4798	4798		29.551	6.1728	1	616410	+		27381	24401	18400	18410	31099	31099					0.13255699396358978
LGLSALLLRYF	11	Unmodified	_LGLSALLLRYF_					0	0	0		nc|ENSG00000179832|Q8NDA8-2|MROH1;ENST00000532255.5_1_8:145218705-145305309:+|nuORF;ENSG00000179832|ENST00000326134|MROH1;ENST00000544576.1_1_8:145297127-145303835:+|nuORF	nc|ENSG00000179832|Q8NDA8-2|MROH1	nc|ENSG00000179832|Q8NDA8-2|MROH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5921936035156	3	422.592058	1264.75434	-0.79538	-0.00033612	2.2528	0.00095203	1.4574	0.00061591	422.592922669687	49.251	2.9518	49.227	47.881	50.833	-0.024033					246	71	5	0	0	0	0.76579	1	4147	4147		18.531	2.0012	1	2205000			27382	7295	18401	18411	31100	31100					0.13255699396381715
LGLSALLLRYF	11	Unmodified	_LGLSALLLRYF_					0	0	0		nc|ENSG00000179832|Q8NDA8-2|MROH1;ENST00000532255.5_1_8:145218705-145305309:+|nuORF;ENSG00000179832|ENST00000326134|MROH1;ENST00000544576.1_1_8:145297127-145303835:+|nuORF	nc|ENSG00000179832|Q8NDA8-2|MROH1	nc|ENSG00000179832|Q8NDA8-2|MROH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5937194824219	3	422.592058	1264.75434	0.36096	0.00015254	1.1238	0.0004749	1.4847	0.00062744	422.59247958124973	59.467	1.1073	59.581	58.945	60.053	0.11396					46	36	2	0	0	0	0.71803	1	5065	5065		28.577	6.7963	1	119250			27383	7295	18401	18411	31101	31101					0.13255699396381715
LGLSALLLRYF	11	Unmodified	_LGLSALLLRYF_					0	0	0		nc|ENSG00000179832|Q8NDA8-2|MROH1;ENST00000532255.5_1_8:145218705-145305309:+|nuORF;ENSG00000179832|ENST00000326134|MROH1;ENST00000544576.1_1_8:145297127-145303835:+|nuORF	nc|ENSG00000179832|Q8NDA8-2|MROH1	nc|ENSG00000179832|Q8NDA8-2|MROH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.59234619140625	3	422.592058	1264.75434	-0.80518	-0.00034026	2.6379	0.0011148	1.8327	0.0007745	422.59310710706274	46.905	2.5172	47.828	47.069	49.587	0.92315					149	61	4	0	0	0	0.68431	1	4553	4553		34.087	10.564	1	3696000			27384	7295	18401	18411	31102	31102					0.13255699396381715
LGLSALLLRYF	11	Unmodified	_LGLSALLLRYF_					0	0	0		nc|ENSG00000179832|Q8NDA8-2|MROH1;ENST00000532255.5_1_8:145218705-145305309:+|nuORF;ENSG00000179832|ENST00000326134|MROH1;ENST00000544576.1_1_8:145297127-145303835:+|nuORF	nc|ENSG00000179832|Q8NDA8-2|MROH1	nc|ENSG00000179832|Q8NDA8-2|MROH1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	422.592058	1264.75434	-0.86355	-0.00036493	2.2223	0.00093914	1.3588	0.00057421	422.5928166029133	59.578	1.21	59.578	58.898	60.108	0.00051117	-0.0013775	0.00044098	NaN	28.577	75	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97624			27385	7295	18401	18411							0.13255699396381715
LGLSARVLSQA	11	Unmodified	_LGLSARVLSQA_					0	0	0		ENST00000228506.7_1_12:121136080-121136296:+|nuORF	ENST00000228506.7_1_12:121136080-121136296:+|nuORF	ENST00000228506.7_1_12:121136080-121136296:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.8286743164062	2	557.83258	1113.65061	0.85904	0.0004792	-4.0851	-0.0022788	-3.2261	-0.0017996	557.8303228390891	100.95	1.6407	101.1	100.55	102.19	0.14352					87	39	3	0	0	0	0.732	1	10552	10552		26.063	0.48933	1	700710			27386	9205	18402	18412	31103	31103					0.09832792288716519
LGLSAVPMVA	10	Unmodified	_LGLSAVPMVA_					0	0	0		ENST00000391809.6_1_19:51453353-51456217:-|nuORF	ENST00000391809.6_1_19:51453353-51456217:-|nuORF	ENST00000391809.6_1_19:51453353-51456217:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.279541015625	2	479.275521	956.536489	0.61468	0.0002946	3.1717	0.0015201	3.7864	0.0018147	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.81018	1	7697	7697		38.806	3.6054	1	1802300			27387	11001	18403	18413	31104	31104					0.05648186202256511
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78021240234375	2	434.778754	867.542954	0.048931	2.1274E-05	3.263	0.0014187	3.312	0.00144	434.780055906595	38.381	1.4097	38.353	37.994	39.403	-0.027843					122	32	4	0	0	0	0.76996	3	2701	2677;2689;2701		33.516	1.5607	1	2404700	+		27388	18720	18404	18414	31105;31106;31107	31107					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7803955078125	2	434.778754	867.542954	0.13644	5.932E-05	2.2845	0.00099327	2.421	0.0010526	434.77963633612353	39.861	1.5425	39.83	39.322	40.865	-0.03027					156	40	5	0	0	0	0.76996	1	2737	2737		33.516	8.0654	1	4621500	+		27389	18720	18404	18414	31108	31108					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77899169921875	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.76996	1	2979	2979		33.516	0	1	2938700	+		27390	18720	18404	18414	31109	31109					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77984619140625	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.7932	1	3874	3874		26.796	1.3459	1	2017500	+		27391	18720	18404	18414	31110	31110					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7803039550781	2	434.778754	867.542954	-1.3516	-0.00058764	3.9223	0.0017053	2.5707	0.0011177	434.78034506978366	39.667	1.8641	39.623	39.121	40.985	-0.043697					176	46	5	0	0	0	0.76402	1	2798	2798		35.201	1.6851	1	3943300	+		27392	18720	18404	18414	31111	31111					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796325683594	2	434.778754	867.542954	-1.2494	-0.00054321	3.5325	0.0015359	2.2831	0.00099266	434.7801616022163	41.477	1.7868	41.436	40.922	42.709	-0.04081					147	45	4	0	0	0	0.7932	1	3073	3073		25.45	1.2474	1	2800900	+		27393	18720	18404	18414	31112	31112					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77984619140625	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.76402	1	3936	3936		35.201	1.6851	1	2468400	+		27394	18720	18404	18414	31113	31113					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.78033447265625	2	434.778754	867.542954	0.085891	3.7343E-05	2.526	0.0010983	2.6119	0.0011356	434.77973178522114	39.697	1.6335	39.706	39.141	40.774	0.0092812					137	39	4	0	0	0	0.67235	1	2731	2731		42.474	8.9589	1	4100400	+		27395	18720	18404	18414	31114	31114					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77947998046875	2	434.778754	867.542954	1.0906	0.00047416	1.4824	0.00064451	2.573	0.0011187	434.77927379886756	45.133	1.9101	45.129	44.288	46.198	-0.0041618					129	44	4	0	0	0	0.7932	1	3667	3667		25.45	0	1	1333000	+		27396	18720	18404	18414	31115	31115					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7792663574219	2	434.778754	867.542954	1.3776	0.00059897	1.1215	0.0004876	2.4991	0.0010866	434.7791184687597	46.776	1.6866	46.772	46.112	47.798	-0.0041618					148	47	4	0	0	0	0.58151	2	3711	3711;3908		47.916	9.1095	1	2109000	+		27397	18720	18404	18414	31116;31117	31116					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7798156738281	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.76996	1	2792	2792		33.516	1.5607	1	2524800	+		27398	18720	18404	18414	31118	31118					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7788391113281	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.7932	1	3331	3331		26.796	1.3459	1	1177900	+		27399	18720	18404	18414	31119	31119					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801208496094	2	434.778754	867.542954	0.17139	7.4517E-05	3.201	0.0013917	3.3724	0.0014663	434.7800235008866	37.854	1.477	37.948	37.639	39.116	0.094318					162	48	4	0	0	0	0.7932	1	2308	2308		25.45	2.4077	1	2203700	+		27400	18720	18404	18414	31120	31120					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77972412109375	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.76996	1	2968	2968		33.516	1.5607	1	2537300	+		27401	18720	18404	18414	31121	31121					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7798156738281	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.7932	1	3277	3277		25.45	0	1	1327200	+		27402	18720	18404	18414	31122	31122					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801818847656	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.7932	1	3500	3500		25.45	1.2474	1	2750200	+		27403	18720	18404	18414	31123	31123					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7802734375	2	434.778754	867.542954	-0.61408	-0.00026699	3.3286	0.0014472	2.7146	0.0011802	434.78015323105376	52.924	3.3917	52.849	52.471	55.862	-0.074512					147	100	2	0	0	0	0.77546	1	4357	4357		31.955	1.4512	1	526750	+		27404	18720	18404	18414	31124	31124					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.78033447265625	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.76402	1	3747	3747		35.201	1.6851	1	6567600	+		27405	18720	18404	18414	31125	31125					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.779296875	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.69914	1	2593	2593		40.573	0	1	7451800	+		27406	18720	18404	18414	31126	31126					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801208496094	2	434.778754	867.542954	0.24981	0.00010861	3.5134	0.0015276	3.7632	0.0016362	434.78017285768743	37.739	1.2173	38.259	37.943	39.16	0.51989					114	30	4	0	0	0	0.76996	2	3040	3040;3133		33.516	1.5607	1	8689200	+		27407	18720	18404	18414	31127;31128	31127					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7776794433594	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.7932	1	3405	3405		26.796	0	1	15771000	+		27408	18720	18404	18414	31129	31129					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801208496094	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.76996	1	3814	3814		33.516	1.5607	1	6824500	+		27409	18720	18404	18414	31130	31130					0.10388447425293634
LGLSIGVPI	9	Unmodified	_LGLSIGVPI_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	434.778754	867.542954	-1.4872	-0.00064659	2.9694	0.001291	1.4823	0.00064445	434.7799081673859	43.398	0.96524	44.172	43.498	44.463	0.7738					64	23	3	0	0	0	0.7932	1	3887	3887		26.796	1.3459	1	2227600	+		27410	18720	18404	18414	31131	31131					0.10388447425293634
LGLSIPKP	8	Unmodified	_LGLSIPKP_					0	0	0		ENSG00000267041|ENST00000591344|ZNF850	ENSG00000267041|ENST00000591344|ZNF850	ENSG00000267041|ENST00000591344|ZNF850	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2658996582031	2	412.765646	823.516739	-1.7927	-0.00073995	4.3385	0.0017908	2.5459	0.0010508	412.76798042268337	46.08	2.981	46.08	44.739	47.72	0					190	86	3	0	0	0	0.89962	1	3636	3636		38.806	0	1	706370			27411	8955	18405	18415	31132	31132					0.0979217825380374
LGLSIPKP	8	Unmodified	_LGLSIPKP_					0	0	0		ENSG00000267041|ENST00000591344|ZNF850	ENSG00000267041|ENST00000591344|ZNF850	ENSG00000267041|ENST00000591344|ZNF850	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.76708984375	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.65	1	40.619	40.119	41.119	-0.030991								0	0	0	0.29344	1	2911	2911		31.955	2.1133	1				27412	8955	18405	18415	31133	31133					0.0979217825380374
LGLSIPKP	8	Unmodified	_LGLSIPKP_					0	0	0		ENSG00000267041|ENST00000591344|ZNF850	ENSG00000267041|ENST00000591344|ZNF850	ENSG00000267041|ENST00000591344|ZNF850	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76702880859375	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.8347	1	2834	2834		23.042	1.3402	1	669780			27413	8955	18405	18415	31134	31134					0.0979217825380374
LGLSIVRVFSF	11	Unmodified	_LGLSIVRVFSF_					0	0	0			REV__ENSG00000159063|ENST00000299626|ALG8	REV__ENSG00000159063|ENST00000299626|ALG8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.3733520507812	2	619.368798	1236.72304	1.9872	0.0012308	3.6389	0.0022538	5.6261	0.0034846	619.3705755303217	101.25	1.7847	101.55	101.13	102.91	0.2999					90	48	3	0	0	0	0.59499	1	12292	12292		45.022	8.5755	1	2252000	+		27414	20633	18406	18416	31135	31135					0.11415126362271621
LGLSKEHR	8	Unmodified	_LGLSKEHR_					0	0	0			REV__ENSG00000205250|ENST00000379378|E2F4	REV__ENSG00000205250|ENST00000379378|E2F4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.27203369140625	2	470.272158	938.529764	0.69739	0.00032796	-0.70102	-0.00032967	-0.0036337	-1.7088E-06	470.2717761018985	92.152	2.8924	92.309	91.308	94.201	0.15649					149	68	4	0	0	0	0.89494	1	9298	9298		37.159	0	1	1938200	+		27415	23545	18407	18417	31136	31136					0.05804009365908769
LGLSKEHR	8	Unmodified	_LGLSKEHR_					0	0	0			REV__ENSG00000205250|ENST00000379378|E2F4	REV__ENSG00000205250|ENST00000379378|E2F4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.27191162109375	2	470.272158	938.529764	-1.7118	-0.000805	1.6827	0.00079131	-0.029114	-1.3691E-05	470.2729404281299	92.166	2.8676	92.352	91.202	94.069	0.18582					129	67	3	0	0	0	0.91977	1	9289	9289		45.952	11.779	1	1756700	+		27416	23545	18407	18417	31137	31137					0.05804009365908769
LGLSNTGQFV	10	Unmodified	_LGLSNTGQFV_					0	0	0			REV__nc|ENSG00000124151|Q9Y6Q9-2|NCOA3	REV__nc|ENSG00000124151|Q9Y6Q9-2|NCOA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8103637695312	2	518.277106	1034.53966	1.1704	0.00060661	2.7281	0.0014139	3.8985	0.0020205	518.278376577697	97.637	0.57816	98.028	97.722	98.301	0.39065					17	13	2	0	0	0	0.37624	1	11804	11804		49.442	18.938	1	177380	+		27417	18562	18408	18418	31138	31138					0.023771525806068894
LGLSPDLVVC	10	Unmodified	_LGLSPDLVVC_					0	0	0		ENSG00000171793|ENST00000650070|CTPS1	ENSG00000171793|ENST00000650070|CTPS1	ENSG00000171793|ENST00000650070|CTPS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.28076171875	2	508.27826	1014.54197	0.65225	0.00033152	3.1896	0.0016212	3.8418	0.0019527	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.86452	1	10455	10455		30.504	0	1	1819500			27418	6709	18409	18419	31139	31139					0.035278649940664764
LGLSPQVV	8	Unmodified	_LGLSPQVV_					0	0	0		ENST00000257247.11_2_11:62304009-62314149:-|nuORF	ENST00000257247.11_2_11:62304009-62314149:-|nuORF	ENST00000257247.11_2_11:62304009-62314149:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2566223144531	2	406.747453	811.480354	0.41559	0.00016904	2.3491	0.00095548	2.7647	0.0011245	406.74829291407167	44.62	1.7365	45.083	43.818	45.554	0.46313					57	42	2	0	0	0	0.4196	1	4061	4061		26.796	0	1	225560			27419	9350	18410	18420	31140	31140					0.06707301357096185
LGLSPQVV	8	Unmodified	_LGLSPQVV_					0	0	0		ENST00000257247.11_2_11:62304009-62314149:-|nuORF	ENST00000257247.11_2_11:62304009-62314149:-|nuORF	ENST00000257247.11_2_11:62304009-62314149:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	406.747453	811.480354	0.13405	5.4526E-05	3.0313	0.001233	3.1654	0.0012875	406.748680587983	45.086	1.8008	45.063	43.895	45.696	-0.023079	0.026894	-0.00010539	NaN	26.796	63	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95286			27420	9350	18410	18420							0.06707301357096185
LGLSPQVV	8	Unmodified	_LGLSPQVV_					0	0	0		ENST00000257247.11_2_11:62304009-62314149:-|nuORF	ENST00000257247.11_2_11:62304009-62314149:-|nuORF	ENST00000257247.11_2_11:62304009-62314149:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.747453	811.480354	-1.0109	-0.00041119	4.2252	0.0017186	3.2143	0.0013074	406.7491490858584	45.112	1.7779	45.081	44.106	45.884	-0.031067	0.044882	0.00086584	NaN	26.796	64	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93641			27421	9350	18410	18420							0.06707301357096185
LGLSPQVV	8	Unmodified	_LGLSPQVV_					0	0	0		ENST00000257247.11_2_11:62304009-62314149:-|nuORF	ENST00000257247.11_2_11:62304009-62314149:-|nuORF	ENST00000257247.11_2_11:62304009-62314149:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.747453	811.480354	1.9346	0.00078689	1.1207	0.00045583	3.0553	0.0012427	406.74792306116876	44.9	1.7512	44.896	44.129	45.88	-0.0041618	-0.14037	-0.0016597	NaN	26.796	67	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80114			27422	9350	18410	18420							0.06707301357096185
LGLSPQVV	8	Unmodified	_LGLSPQVV_					0	0	0		ENST00000257247.11_2_11:62304009-62314149:-|nuORF	ENST00000257247.11_2_11:62304009-62314149:-|nuORF	ENST00000257247.11_2_11:62304009-62314149:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	406.747453	811.480354	0.22942	9.3316E-05	2.977	0.0012109	3.2065	0.0013042	406.74864641230295	44.883	2.0792	44.932	43.916	45.995	0.048996	-0.10391	-0.00014954	NaN	26.796	73	51	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98039			27423	9350	18410	18420							0.06707301357096185
LGLSRQPQ	8	Unmodified	_LGLSRQPQ_					0	0	0		ENSG00000168124|ENST00000304646|OR1F1;nc|ENSG00000203581|Q96R84|OR1F2P	ENSG00000168124|ENST00000304646|OR1F1;nc|ENSG00000203581|Q96R84|OR1F2P	ENSG00000168124|ENST00000304646|OR1F1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.6158447265625	2	449.758884	897.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.972	1	55.027	54.527	55.527	0.055614								0	0	0	0.29816	1	4576	4576		38.806	4.6336	1				27424	6373;15202	18411	18421	31141	31141					0.05036320474573586
LGLSRWKVF	9	Unmodified	_LGLSRWKVF_					0	0	0		ENST00000297135.7_1_7:107188762-107194774:-|nuORF	ENST00000297135.7_1_7:107188762-107194774:-|nuORF	ENST00000297135.7_1_7:107188762-107194774:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.3323364257812	2	553.329476	1104.6444	2.7435	0.0015181	2.5791	0.0014271	5.3227	0.0029452	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.74721	2	10374	10374;10484		37.159	8.0096	1	4237100			27425	9755	18412	18422	31142;31143	31142					0.09626318847836046
LGLSRWKVF	9	Unmodified	_LGLSRWKVF_					0	0	0		ENST00000297135.7_1_7:107188762-107194774:-|nuORF	ENST00000297135.7_1_7:107188762-107194774:-|nuORF	ENST00000297135.7_1_7:107188762-107194774:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3323364257812	2	553.329476	1104.6444	1.2853	0.00071117	3.9606	0.0021915	5.2459	0.0029027	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.77546	1	10326	10326		31.955	6.3808	1	4524400			27426	9755	18412	18422	31144	31144					0.09626318847836046
LGLSRWKVF	9	Unmodified	_LGLSRWKVF_					0	0	0		ENST00000297135.7_1_7:107188762-107194774:-|nuORF	ENST00000297135.7_1_7:107188762-107194774:-|nuORF	ENST00000297135.7_1_7:107188762-107194774:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.33251953125	2	553.329476	1104.6444	1.115	0.00061697	4.2458	0.0023493	5.3608	0.0029663	553.3316729497465	96.557	1.6944	96.962	96.464	98.158	0.40498					120	40	4	0	0	0	0.74721	1	11567	11567		37.159	6.6555	1	3081200			27427	9755	18412	18422	31145	31145					0.09626318847836046
LGLSTLTPPL	10	Unmodified	_LGLSTLTPPL_					0	0	0			REV__nc|ENSG00000265763|Q96MN9-2|ZNF488	REV__nc|ENSG00000265763|Q96MN9-2|ZNF488	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3081359863281	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.088	1	44.096	43.596	44.596	0.0084534								0	0	0	0.45132	1	3085	3085		45.952	10.334	1		+		27428	23959	18413	18423	31146	31146					0.09632084279917308
LGLSTLTPPL	10	Unmodified	_LGLSTLTPPL_					0	0	0			REV__nc|ENSG00000265763|Q96MN9-2|ZNF488	REV__nc|ENSG00000265763|Q96MN9-2|ZNF488	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3092956542969	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.82	1	54.912	54.412	55.412	0.091167								0	0	0	0.45132	1	4557	4557		37.159	4.3467	1		+		27429	23959	18413	18423	31147	31147					0.09632084279917308
LGLSTTKN	8	Unmodified	_LGLSTTKN_					0	0	0			REV__ENST00000256689.9_1_12:46754616-46754751:-|nuORF	REV__ENST00000256689.9_1_12:46754616-46754751:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.23980712890625	2	417.239993	832.465432	1.1488	0.00047933	-3.1805	-0.001327	-2.0317	-0.00084772	417.2384906610176	88.485	2.0585	88.411	87.855	89.913	-0.074005					110	48	3	0	0	0	0.89043	1	9176	9176		35.618	2.8059	1	1559000	+		27430	24332	18414	18424	31148	31148					0.04249809489101608
LGLSTVTGK	9	Unmodified	_LGLSTVTGK_					0	0	0		nc|ENSG00000174038|Q5VYM1-3|SPATA31G1;nc|ENSG00000174038|Q5VYM1-2|SPATA31G1;ENSG00000174038|ENST00000312292|C9orf131	nc|ENSG00000174038|Q5VYM1-3|SPATA31G1	nc|ENSG00000174038|Q5VYM1-3|SPATA31G1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2630310058594	2	438.263468	874.512382	-1.2747	-0.00055866	-0.66852	-0.00029299	-1.9432	-0.00085165	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.7932	1	3857	3857		16.473	0	1	219150000			27431	6905	18415	18425	31149	31149					0.07010669040232642
LGLTDVPE	8	Unmodified	_LGLTDVPE_					0	0	0		ENSG00000179615|ENST00000641114|OR2AP1	ENSG00000179615|ENST00000641114|OR2AP1	ENSG00000179615|ENST00000641114|OR2AP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.9273681640625	2	422.226551	842.438549	-0.23331	-9.8511E-05	3.6398	0.0015368	3.4065	0.0014383	422.2279906509547	57.163	3.0433	57.134	56.764	59.807	-0.02866					141	87	3	0	0	0	0.4196	1	5487	5487		33.516	0	1	900990			27432	7283	18416	18426	31150	31150					0.011027008779137759
LGLTKLQLH	9	Unmodified	_LGLTKLQLH_					0	0	0			REV__nc|ENSG00000078269|O15056-2|SYNJ2	REV__nc|ENSG00000078269|O15056-2|SYNJ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.8209533691406	2	511.821484	1021.62842	-0.5682	-0.00029082	0.6085	0.00031144	0.040297	2.0625E-05	511.82158181874644	38.906	0.59342	39.46	39.153	39.746	0.5545					30	13	3	0	0	0	0.30689	1	3257	3257		64.207	5.4253	1	455470	+		27433	16761	18417	18427	31151	31151					0.11846612610952434
LGLTKLQLH	9	Unmodified	_LGLTKLQLH_					0	0	0			REV__nc|ENSG00000078269|O15056-2|SYNJ2	REV__nc|ENSG00000078269|O15056-2|SYNJ2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	511.821484	1021.62842	-0.59566	-0.00030487	0.66792	0.00034186	0.072263	3.6986E-05	511.8216606163572	38.995	0.42357	39.337	39.107	39.531	0.34187	-0.061524	3.9718E-05	NaN	64.207	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	284600	+		27434	16761	18417	18427							0.11846612610952434
LGLTLAAPL	9	Unmodified	_LGLTLAAPL_					0	0	0		ENST00000377990.6_2_2:65296717-65296849:+|nuORF	ENST00000377990.6_2_2:65296717-65296849:+|nuORF	ENST00000377990.6_2_2:65296717-65296849:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.780029296875	2	434.778754	867.542954	0.083396	3.6259E-05	3.2514	0.0014137	3.3348	0.0014499	434.78005466270537	34.317	1.0002	34.271	33.763	34.763	-0.045815					125	41	4	0	0	0	0.7932	1	1700	1700		26.796	1.3459	1	3033400			27435	10849	18418	18428	31152	31152					0.10388447425270897
LGLTLAAPL	9	Unmodified	_LGLTLAAPL_					0	0	0		ENST00000377990.6_2_2:65296717-65296849:+|nuORF	ENST00000377990.6_2_2:65296717-65296849:+|nuORF	ENST00000377990.6_2_2:65296717-65296849:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801208496094	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.76996	1	2045	2045		33.516	1.5607	1	4750000			27436	10849	18418	18428	31153	31153					0.10388447425270897
LGLTLTPLV	9	Unmodified	_LGLTLTPLV_					0	0	0			REV__nc|ENSG00000138623|O75326-2|SEMA7A	REV__nc|ENSG00000138623|O75326-2|SEMA7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.8008728027344	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.7932	1	3829	3829		24.203	0	1	5050800	+		27437	19483	18419	18429	31154	31154					0.11905003113815837
LGLTTLAPG	9	Unmodified	_LGLTTLAPG_					0	0	0		nc|ENSG00000215041|Q96JN8-2|NEURL4;ENSG00000215041|ENST00000399464|NEURL4	nc|ENSG00000215041|Q96JN8-2|NEURL4	nc|ENSG00000215041|Q96JN8-2|NEURL4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.75140380859375	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.31	1	75.264	74.764	75.764	-0.045982								0	0	0	0.2969	1	7422	7422		31.955	1.4512	1				27438	8645	18420	18430	31155	31155					0.06383284011531032
LGLTTVPPD	9	Unmodified	_LGLTTVPPD_					0	0	0		ENSG00000166159|ENST00000299194|LRTM2	ENSG00000166159|ENST00000299194|LRTM2	ENSG00000166159|ENST00000299194|LRTM2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7931213378906	2	456.755475	911.496398	-0.044349	-2.0257E-05	-2.162	-0.00098751	-2.2063	-0.0010078	456.7570203420482	36.592	0.26495	36.574	36.376	36.641	-0.018673					6	5	2	0	0	0	0.20789	1	2343	2343		45.952	0	1	11642			27439	6163	18421	18431	31156	31156					0.03710962803336315
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3082275390625	2	506.307875	1010.6012	-1.5415	-0.00078047	2.7011	0.0013676	1.1596	0.00058712	506.3093285794098	44.216	2.5192	44.216	43.58	46.099	0					89	61	3	0	0	0	0.8608	1	3198	3198		34.173	2.2177	1	527690	+		27440	16141	18422	18432	31157	31157					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3089904785156	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.506	1	46.506	46.006	47.006	0								0	0	0	0.45132	1	3504	3504		27.882	2.4321	1		+		27441	16141	18422	18432	31158	31158					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3088684082031	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.551	1	55.551	55.051	56.051	0								0	0	0	0.45132	1	4721	4721		32.812	9.7699	1		+		27442	16141	18422	18432	31159	31159					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.309326171875	2	506.307875	1010.6012	0.26704	0.0001352	1.0898	0.00055178	1.3569	0.00068698	506.30835501628917	44.614	1.9662	44.591	43.729	45.696	-0.023079					64	45	2	0	0	0	0.8608	1	3525	3525		34.173	0	1	414870	+		27443	16141	18422	18432	31160	31160					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7994384765625	2	506.307875	1010.6012	0.14716	7.451E-05	2.6493	0.0013414	2.7965	0.0014159	506.3091725658314	48.035	0.66149	48.026	47.852	48.514	-0.0093269					22	16	2	0	0	0	0.37624	1	3983	3983		20.947	0	1	152010	+		27444	16141	18422	18432	31161	31161					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3077697753906	2	506.307875	1010.6012	-0.56491	-0.00028602	2.5614	0.0012969	1.9965	0.0010108	506.3091538263502	49.365	1.8951	49.341	48.401	50.296	-0.024029					65	42	2	0	0	0	0.8608	2	4209	4209;4221		34.173	2.2177	1	197030	+		27445	16141	18422	18432	31162;31163	31162					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.30780029296875	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.347	1	44.314	43.814	44.814	-0.033474								0	0	0	0.45132	1	3528	3528		32.812	3.6629	1		+		27446	16141	18422	18432	31164	31164					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3078918457031	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.434	1	44.401	43.901	44.901	-0.033474								0	0	0	0.45132	1	3540	3540		35.618	3.6634	1		+		27447	16141	18422	18432	31165	31165					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3082580566406	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.616	1	44.582	44.082	45.082	-0.033474								0	0	0	0.45132	1	3565	3565		42.396	9.5837	1		+		27448	16141	18422	18432	31166	31166					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3078308105469	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.51	1	50.487	49.987	50.987	-0.02343								0	0	0	0.45132	1	4378	4378		20.947	0.4651	1		+		27449	16141	18422	18432	31167	31167					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7996826171875	2	506.307875	1010.6012	-0.56491	-0.00028602	2.5614	0.0012969	1.9965	0.0010108	506.3091538263502	49.365	1.8951	49.341	48.401	50.296	-0.024029					65	42	2	0	0	0	0.37624	1	4126	4126		21.96	18.276	1	197030	+		27450	16141	18422	18432	31168	31168					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.30731201171875	2	506.307875	1010.6012	-1.5423	-0.00078085	3.4972	0.0017707	1.955	0.00098982	506.3096307758861	42.412	0.86427	42.415	42.076	42.94	0.0034142					30	20	2	0	0	0	0.84112	1	3234	3234		37.159	6.6555	1	64842	+		27451	16141	18422	18432	31169	31169					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.31103515625	2	506.307875	1010.6012	-0.71236	-0.00036068	2.8135	0.0014245	2.1011	0.0010638	506.3092918145893	49.505	2.3029	49.509	48.577	50.88	0.0035973					80	56	2	0	0	0	0.8608	1	4176	4176		34.173	3.6689	1	177720	+		27452	16141	18422	18432	31170	31170					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.30877685546875	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.886	1	44.882	44.382	45.382	-0.0041618								0	0	0	0.45132	1	3537	3537		44.117	1.6423	1		+		27453	16141	18422	18432	31171	31171					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3080139160156	2	506.307875	1010.6012	-0.49937	-0.00025284	2.5452	0.0012887	2.0458	0.0010358	506.30921071470516	49.299	2.411	49.324	47.87	50.281	0.025578					89	62	2	0	0	0	0.85934	1	3825	3825		35.618	5.1146	1	190740	+		27454	16141	18422	18432	31172	31172					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.307861328125	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.015	1	44.024	43.524	44.524	0.0084534								0	0	0	0.45132	1	3075	3075		20.947	1.587	1		+		27455	16141	18422	18432	31173	31173					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3079528808594	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.174	1	44.182	43.682	44.682	0.0084534								0	0	0	0.45132	1	3097	3097		20.947	0.4651	1		+		27456	16141	18422	18432	31174	31174					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.31024169921875	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.522	1	60.623	60.123	61.123	0.10082								0	0	0	0.45132	1	5239	5239		34.173	3.6689	1		+		27457	16141	18422	18432	31175	31175					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3055114746094	2	506.307875	1010.6012	0.29899	0.00015138	1.2838	0.00065	1.5828	0.00080139	506.3084880553604	44.091	1.7417	44.143	43.633	45.375	0.051537					61	41	3	0	0	0	0.77314	2	3052	3052;3073		40.778	15.204	1	407010	+		27458	16141	18422	18432	31176;31177	31176					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80596923828125	2	506.307875	1010.6012	0.46799	0.00023695	2.0208	0.0010231	2.4888	0.0012601	506.3090292156969	63.021	1.2614	63.143	62.591	63.852	0.12252					86	56	2	0	0	0	0.8608	1	5580	5580		34.173	3.6689	1	130540	+		27459	16141	18422	18432	31178	31178					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3055725097656	2	506.307875	1010.6012	-0.22503	-0.00011393	2.1509	0.001089	1.9259	0.00097507	506.3089485725691	49.441	1.8113	49.348	48.371	50.182	-0.093182					75	43	2	0	0	0	0.85694	2	3767	3767;3830		34.173	7.3764	1	253850	+		27460	16141	18422	18432	31179;31180	31179					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3086242675781	2	506.307875	1010.6012	-0.4302	-0.00021782	2.8218	0.0014287	2.3916	0.0012109	506.3092413243001	54.85	1.3019	54.801	54.615	55.917	-0.049271					56	42	2	0	0	0	0.86718	1	4677	4677		27.882	2.4321	1	188390	+		27461	16141	18422	18432	31181	31181					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.30865478515625	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.248	1	44.19	43.69	44.69	-0.058262								0	0	0	0.45132	1	3104	3104		35.618	7.736	1		+		27462	16141	18422	18432	31182	31182					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3095703125	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.589	1	54.54	54.04	55.04	-0.049271								0	0	0	0.45132	1	4527	4527		34.173	5.023	1		+		27463	16141	18422	18432	31183	31183					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3057556152344	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.911	1	61.927	61.427	62.427	0.015724								0	0	0	0.45132	1	5388	5388		29.15	4.9468	1		+		27464	16141	18422	18432	31184	31184					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3089904785156	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.927	1	62.95	62.45	63.45	0.022984								0	0	0	0.45132	1	5495	5495		27.882	1.1893	1		+		27465	16141	18422	18432	31185	31185					0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	506.307875	1010.6012	-0.059383	-3.0066E-05	1.1811	0.00059798	1.1217	0.00056791	506.30809943045335	63.266	0.30352	63.261	63.084	63.387	-0.0055504	0.05738	-0.0010928	NaN	34.173	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69565	+		27466	16141	18422	18432							0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	506.307875	1010.6012	-1.5029	-0.00076093	6.075	0.0030758	4.5721	0.0023149	506.3112540316796	63.078	0.41181	63.106	62.819	63.231	0.028133	-0.09683	0.0038628	NaN	34.173	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52218	+		27467	16141	18422	18432							0.09632084279905939
LGLTVGLLEP	10	Unmodified	_LGLTVGLLEP_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	506.307875	1010.6012	-0.47384	-0.00023991	2.5338	0.0012829	2.0599	0.001043	506.3091713274983	63.189	0.73106	63.303	62.776	63.507	0.11389	0.099555	0.00027695	NaN	34.173	64	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125810	+		27468	16141	18422	18432							0.09632084279905939
LGLTVPVVP	9	Unmodified	_LGLTVPVVP_					0	0	0		ENST00000561734.5_1_16:835292-835496:-|nuORF	ENST00000561734.5_1_16:835292-835496:-|nuORF	ENST00000561734.5_1_16:835292-835496:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.7875061035156	2	447.786579	893.558604	-0.2396	-0.00010729	3.1431	0.0014074	2.9035	0.0013001	447.7878572308977	38.23	0.51868	38.753	38.434	38.952	0.52235					37	12	4	0	0	0	0.7932	1	3161	3161		20.482	6.7065	1	825840			27469	13840	18423	18433	31186	31186					0.1075673394233263
LGLVDLVAL	9	Unmodified	_LGLVDLVAL_					0	0	0			REV__ENSG00000188897|ENST00000696174|unknown	REV__ENSG00000188897|ENST00000696174|unknown	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.78955078125	2	456.791861	911.569169	0.25783	0.00011777	1.2467	0.00056948	1.5045	0.00068725	456.79223981105497	41.505	1.1583	41.474	40.833	41.991	-0.030987					78	30	4	0	0	0	0.77546	1	2981	2981		31.955	1.4512	1	325120	+		27470	23042	18424	18434	31187	31187					0.10984716596760791
LGLVGLGPV	9	Unmodified	_LGLVGLGPV_					0	0	0		ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.76690673828125	2	412.765646	823.516739	-1.7521	-0.00072319	3.4462	0.0014225	1.6941	0.00069928	412.7678061230934	49.11	3.161	49.11	47.72	50.881	0					177	80	4	0	0	0	0.78292	1	3831	3831		29.842	0	1	570960			27471	11211	18425	18435	31188	31188					0.09792178253815109
LGLVGLGPV	9	Unmodified	_LGLVGLGPV_					0	0	0		ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7673034667969	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.78292	1	2515	2515		29.842	0	1	2034000			27472	11211	18425	18435	31189	31189					0.09792178253815109
LGLVGLGPV	9	Unmodified	_LGLVGLGPV_					0	0	0		ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7654724121094	2	412.765646	823.516739	1.0742	0.00044338	1.0077	0.00041595	2.0819	0.00085933	412.7659693172007	40.207	1.4192	40.217	39.687	41.106	0.0092812					79	35	3	0	0	0	0.72098	1	2931	2931		39.021	0	1	573960			27473	11211	18425	18435	31190	31190					0.09792178253815109
LGLVGLGPV	9	Unmodified	_LGLVGLGPV_					0	0	0		ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.26666259765625	2	412.765646	823.516739	-1.9024	-0.00078523	4.0039	0.0016527	2.1015	0.00086745	412.7675544540149	40.173	1.81	40.179	39.296	41.106	0.0065002					141	57	4	0	0	0	0.78292	2	2424	2424;2628		29.842	0	1	726100			27474	11211	18425	18435	31191;31192	31191					0.09792178253815109
LGLVGLGPV	9	Unmodified	_LGLVGLGPV_					0	0	0		ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2693786621094	2	412.765646	823.516739	-1.8859	-0.00077844	3.9578	0.0016337	2.0719	0.00085522	412.7678129581843	48.855	3.3742	48.881	47.541	50.915	0.025574					176	94	2	0	0	0	0.78292	1	3672	3672		29.842	0	1	621000			27475	11211	18425	18435	31193	31193					0.09792178253815109
LGLVGLGPV	9	Unmodified	_LGLVGLGPV_					0	0	0		ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76702880859375	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.608	1	37.707	37.207	38.207	0.099277								0	0	0	0.30219	1	2169	2169		29.842	0	1				27476	11211	18425	18435	31194	31194					0.09792178253815109
LGLVGLGPV	9	Unmodified	_LGLVGLGPV_					0	0	0		ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7673645019531	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.937	1	38.032	37.532	38.532	0.094322								0	0	0	0.2792	1	2213	2213		39.021	0	1				27477	11211	18425	18435	31195	31195					0.09792178253815109
LGLVGLGPV	9	Unmodified	_LGLVGLGPV_					0	0	0		ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7669372558594	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.78292	2	2144	2144;2297		29.842	0	1	1619400			27478	11211	18425	18435	31196;31197	31196					0.09792178253815109
LGLVGLGPV	9	Unmodified	_LGLVGLGPV_					0	0	0		ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7666015625	2	412.765646	823.516739	-0.33758	-0.00013934	2.1313	0.00087971	1.7937	0.00074037	412.7669144536039	43.714	1.8956	43.657	42.672	44.567	-0.056812					93	46	3	0	0	0	0.78292	1	3055	3055		29.842	0	1	313210			27479	11211	18425	18435	31198	31198					0.09792178253815109
LGLVGLGPV	9	Unmodified	_LGLVGLGPV_					0	0	0		ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	ENST00000399759.7_1_17:3495558-3499051:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7670593261719	2	412.765646	823.516739	1.2488	0.00051545	2.3587	0.00097359	3.6075	0.001489	412.7664969922496	36.891	1.9427	37.376	36.231	38.174	0.48581					136	47	4	0	0	0	0.7932	1	2842	2842		21.702	6.0605	1	3061300			27480	11211	18425	18435	31199	31199					0.09792178253815109
LGLVGPVLG	9	Unmodified	_LGLVGPVLG_					0	0	0		nc|ENSG00000168615|Q13443-2|ADAM9;ENSG00000168615|ENST00000487273|ADAM9	nc|ENSG00000168615|Q13443-2|ADAM9	nc|ENSG00000168615|Q13443-2|ADAM9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.26739501953125	2	412.765646	823.516739	-0.098129	-4.0504E-05	0.66428	0.00027419	0.56615	0.00023369	412.7671463759069	51.656	3.1479	51.654	50.749	53.897	-0.0020447					128	83	2	0	0	0	0.78292	1	4359	4359		29.842	1.5873	1	180920			27481	6418	18426	18436	31200	31200					0.0979217825380374
LGLVGPVLG	9	Unmodified	_LGLVGPVLG_					0	0	0		nc|ENSG00000168615|Q13443-2|ADAM9;ENSG00000168615|ENST00000487273|ADAM9	nc|ENSG00000168615|Q13443-2|ADAM9	nc|ENSG00000168615|Q13443-2|ADAM9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7673034667969	2	412.765646	823.516739	-1.8992	-0.00078392	4.1525	0.001714	2.2533	0.0009301	412.76765198426614	41.794	3.0272	41.798	40.935	43.962	0.0043983					161	84	4	0	0	0	0.7932	1	2823	2823		21.702	3.3779	1	640430			27482	6418	18426	18436	31201	31201					0.0979217825380374
LGLVIEAVI	9	Unmodified	_LGLVIEAVI_					0	0	0			REV__ENSG00000170293|ENST00000307526|CMTM8	REV__ENSG00000170293|ENST00000307526|CMTM8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.3018798828125	2	463.799686	925.584819	-0.24475	-0.00011352	3.0643	0.0014212	2.8195	0.0013077	463.8008545525102	46.185	0.71794	46.106	45.759	46.477	-0.079006					36	20	2	0	0	0	0.7932	1	3389	3389		25.45	1.2474	1	192340	+		27483	21646	18427	18437	31202	31202					0.11905003113804469
LGLVIPKE	8	Unmodified	_LGLVIPKE_					0	0	0		ENSG00000198363|ENST00000379454|ASPH;nc|ENSG00000198363|Q12797-10|ASPH;ENST00000521909.1_1_8:62430043-62438626:-|nuORF	ENSG00000198363|ENST00000379454|ASPH	ENSG00000198363|ENST00000379454|ASPH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7798767089844	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.88915	1	2756	2756		35.201	1.6851	1	2581600			27484	8267	18428	18438	31203	31203					0.10388447425293634
LGLVIPKE	8	Unmodified	_LGLVIPKE_					0	0	0		ENSG00000198363|ENST00000379454|ASPH;nc|ENSG00000198363|Q12797-10|ASPH;ENST00000521909.1_1_8:62430043-62438626:-|nuORF	ENSG00000198363|ENST00000379454|ASPH	ENSG00000198363|ENST00000379454|ASPH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7798156738281	2	434.778754	867.542954	-1.8344	-0.00079754	4.3253	0.0018805	2.4909	0.001083	434.7805085345101	43.07	1.706	43.07	42.535	44.241	0					126	41	4	0	0	0	0.884	1	3025	3025		33.516	0	1	2514600			27485	8267	18428	18438	31204	31204					0.10388447425293634
LGLVIPKE	8	Unmodified	_LGLVIPKE_					0	0	0		ENSG00000198363|ENST00000379454|ASPH;nc|ENSG00000198363|Q12797-10|ASPH;ENST00000521909.1_1_8:62430043-62438626:-|nuORF	ENSG00000198363|ENST00000379454|ASPH	ENSG00000198363|ENST00000379454|ASPH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7793273925781	2	434.778754	867.542954	0.20501	8.9135E-05	2.1081	0.00091654	2.3131	0.0010057	434.77952396468385	43.343	2.099	43.316	42.291	44.39	-0.026768					151	50	4	0	0	0	0.884	1	3346	3346		33.516	0	1	2133200			27486	8267	18428	18438	31205	31205					0.10388447425293634
LGLVIPKE	8	Unmodified	_LGLVIPKE_					0	0	0		ENSG00000198363|ENST00000379454|ASPH;nc|ENSG00000198363|Q12797-10|ASPH;ENST00000521909.1_1_8:62430043-62438626:-|nuORF	ENSG00000198363|ENST00000379454|ASPH	ENSG00000198363|ENST00000379454|ASPH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77972412109375	2	434.778754	867.542954	-1.003	-0.00043608	3.6101	0.0015696	2.6071	0.0011335	434.7801973515074	45.237	1.8216	45.206	44.189	46.01	-0.031067					113	41	4	0	0	0	0.90465	2	3646	3646;3658		40.573	0	1	1431800			27487	8267	18428	18438	31206;31207	31206					0.10388447425293634
LGLVIPKE	8	Unmodified	_LGLVIPKE_					0	0	0		ENSG00000198363|ENST00000379454|ASPH;nc|ENSG00000198363|Q12797-10|ASPH;ENST00000521909.1_1_8:62430043-62438626:-|nuORF	ENSG00000198363|ENST00000379454|ASPH	ENSG00000198363|ENST00000379454|ASPH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78021240234375	2	434.778754	867.542954	0.13638	5.9295E-05	3.2501	0.0014131	3.3864	0.0014724	434.7800361226264	34.243	0.88012	34.352	33.821	34.701	0.10829					118	39	4	0	0	0	0.91005	1	1743	1743		42.474	7.2737	1	2838300			27488	8267	18428	18438	31208	31208					0.10388447425293634
LGLVIPKE	8	Unmodified	_LGLVIPKE_					0	0	0		ENSG00000198363|ENST00000379454|ASPH;nc|ENSG00000198363|Q12797-10|ASPH;ENST00000521909.1_1_8:62430043-62438626:-|nuORF	ENSG00000198363|ENST00000379454|ASPH	ENSG00000198363|ENST00000379454|ASPH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.780029296875	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.9159	1	3680	3680		44.531	7.5026	1	1986600			27489	8267	18428	18438	31209	31209					0.10388447425293634
LGLVIPKE	8	Unmodified	_LGLVIPKE_					0	0	0		ENSG00000198363|ENST00000379454|ASPH;nc|ENSG00000198363|Q12797-10|ASPH;ENST00000521909.1_1_8:62430043-62438626:-|nuORF	ENSG00000198363|ENST00000379454|ASPH	ENSG00000198363|ENST00000379454|ASPH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7793273925781	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.88915	1	3710	3710		35.201	0	1	6567600			27490	8267	18428	18438	31210	31210					0.10388447425293634
LGLVKLPQ	8	Unmodified	_LGLVKLPQ_					0	0	0			REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.779296875	2	434.286746	866.558939	-1.7958	-0.00077991	4.0577	0.0017622	2.2618	0.00098229	434.2885515472175	45.82	1.7825	45.82	45.049	46.832	0					72	44	3	0	0	0	0.4196	1	3460	3460		26.796	7.4361	1	237750	+		27491	27468	18429	18439	31211	31211					0.12032153662175915
LGLVKLPQ	8	Unmodified	_LGLVKLPQ_					0	0	0			REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.779541015625	2	434.286746	866.558939	0.23969	0.0001041	1.7733	0.00077012	2.013	0.00087422	434.2876824971314	41.772	1.0345	41.741	41.461	42.496	-0.030991					30	24	2	0	0	0	0.4196	1	3115	3115		25.45	11.675	1	81520	+		27492	27468	18429	18439	31212	31212					0.12032153662175915
LGLVKLPQ	8	Unmodified	_LGLVKLPQ_					0	0	0			REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7793273925781	2	434.286746	866.558939	0.11268	4.8935E-05	2.0688	0.00089844	2.1815	0.00094738	434.28766926171454	45.918	1.9361	45.9	44.968	46.904	-0.018585					73	47	3	0	0	0	0.4196	1	3696	3696		31.955	5.1588	1	189640	+		27493	27468	18429	18439	31213	31213					0.12032153662175915
LGLVKLPQ	8	Unmodified	_LGLVKLPQ_					0	0	0			REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7795104980469	2	434.286746	866.558939	-0.43183	-0.00018754	3.1588	0.0013718	2.727	0.0011843	434.2881710412633	48.693	0.81977	48.6	48.209	49.029	-0.093182					29	19	2	0	0	0	0.4196	1	3771	3771		26.796	0	1	79337	+		27494	27468	18429	18439	31214	31214					0.12032153662175915
LGLVKLPQ	8	Unmodified	_LGLVKLPQ_					0	0	0			REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799072265625	2	434.286746	866.558939	-0.32769	-0.00014231	2.8805	0.001251	2.5529	0.0011087	434.28800330903823	45.779	1.9351	45.71	44.636	46.571	-0.069244					75	50	3	0	0	0	0.4196	1	3371	3371		20.482	0	1	201690	+		27495	27468	18429	18439	31215	31215					0.12032153662175915
LGLVKLPQ	8	Unmodified	_LGLVKLPQ_					0	0	0			REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78009033203125	2	434.286746	866.558939	0.031612	1.3729E-05	3.4225	0.0014863	3.4541	0.0015001	434.28814498323493	35.723	1.2315	35.663	35.231	36.463	-0.060333					68	35	3	0	0	0	0.4196	1	2000	2000		38.806	6.8513	1	292750	+		27496	27468	18429	18439	31216	31216					0.12032153662175915
LGLVKLPQ	8	Unmodified	_LGLVKLPQ_					0	0	0			REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77935791015625	2	434.286746	866.558939	-0.69515	-0.00030189	2.085	0.0009055	1.3899	0.00060361	434.28767405896025	43.978	0.85226	44.428	44.16	45.012	0.45025					41	20	3	0	0	0	0.4196	1	4058	4058		20.482	1.1219	1	558690	+		27497	27468	18429	18439	31217	31217					0.12032153662175915
LGLVKLPQ	8	Unmodified	_LGLVKLPQ_					0	0	0			REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7803039550781	2	434.286746	866.558939	0.45288	0.00019668	3.7573	0.0016318	4.2102	0.0018284	434.28830716235717	34.727	1.2144	34.937	34.604	35.819	0.21002					70	30	3	0	0	0	0.4196	1	2563	2563		33.516	16.151	1	503780	+		27498	27468	18429	18439	31218	31218					0.12032153662175915
LGLVKLPQ	8	Unmodified	_LGLVKLPQ_					0	0	0			REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	REV__ENST00000583163.1_1_18:1566465-1626335:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.779296875	2	434.286746	866.558939	1.5578	0.00067653	2.7614	0.0011992	4.3192	0.0018758	434.2878779306563	34.653	1.2112	35.034	34.689	35.9	0.3812					70	30	3	0	0	0	0.4196	1	2593	2593		25.45	6.0902	1	708680	+		27499	27468	18429	18439	31219	31219					0.12032153662175915
LGLVKPLQ	8	Unmodified	_LGLVKPLQ_					0	0	0			REV__chr2:42187327-42245505|34|14.53|0.32|5.53|+|1|TE_info:AluJo,AluJo_dup7891,Alu,SINE,donor,-,42187062,42187327|None,EML4|4	REV__chr2:42187327-42245505|34|14.53|0.32|5.53|+|1|TE_info:AluJo,AluJo_dup7891,Alu,SINE,donor,-,42187062,42187327|None,EML4|4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7800598144531	2	434.286746	866.558939	0.43161	0.00018744	2.588	0.0011239	3.0196	0.0013114	434.2878101201753	35.833	1.8982	35.843	35.295	37.193	0.0092812					81	41	3	0	0	0	0.4196	1	2365	2365		33.516	6.7195	1	264390	+		27500	15758	18430	18440	31220	31220					0.12032153662175915
LGLVLAVGAV	10	Unmodified	_LGLVLAVGAV_					0	0	0		ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	ENSG00000162896|ENST00000356495|PIGR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.2996826171875	2	456.299853	910.585153	-1.8518	-0.00084499	3.0889	0.0014095	1.237	0.00056446	456.30111396702245	40.968	1.2974	40.968	40.595	41.892	0					95	40	3	0	0	0	0.85976	1	2736	2736		35.201	0	1	438450			27501	5747	18431	18441	31221	31221					0.1262842283366581
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	2	434.778754	867.542954	-0.10471	-4.5526E-05	3.4241	0.0014887	3.3194	0.0014432	434.7801797688748	34.455	0.9535	34.45	33.903	34.857	-0.0047417					93	22	5	0	0	0	0.76996	1	2067	2067		33.516	6.7195	1	2846000			27502	5672	18432	18442	31222	31222					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78009033203125	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.72402	1	2361	2361		38.806	3.6054	1	3714500			27503	5672	18432	18442	31223	31223					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.780029296875	2	434.778754	867.542954	0.048931	2.1274E-05	3.263	0.0014187	3.312	0.00144	434.780055906595	38.381	1.4097	38.353	37.994	39.403	-0.027843					122	32	4	0	0	0	0.69914	1	2606	2606		40.573	5.3719	1	2404700			27504	5672	18432	18442	31224	31224					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.779541015625	2	434.778754	867.542954	0.13644	5.932E-05	2.2845	0.00099327	2.421	0.0010526	434.77963633612353	39.861	1.5425	39.83	39.322	40.865	-0.03027					156	40	5	0	0	0	0.76996	2	2875	2875;2940		33.516	0	1	4621500			27505	5672	18432	18442	31225;31226	31225					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77947998046875	2	434.778754	867.542954	0.20501	8.9135E-05	2.1081	0.00091654	2.3131	0.0010057	434.77952396468385	43.343	2.099	43.316	42.291	44.39	-0.026768					151	50	4	0	0	0	0.67235	1	3335	3335		42.474	0	1	2133200			27506	5672	18432	18442	31227	31227					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77978515625	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.77546	1	3593	3593		31.955	5.1588	1	1294000			27507	5672	18432	18442	31228	31228					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7799377441406	2	434.778754	867.542954	0.023581	1.0252E-05	2.6379	0.0011469	2.6615	0.0011571	434.7797629333649	48.108	2.6391	48.098	47.574	50.213	-0.0093269					205	68	4	0	0	0	0.67235	1	3938	3938		42.474	1.9018	1	2315200			27508	5672	18432	18442	31229	31229					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801818847656	2	434.778754	867.542954	-0.72462	-0.00031505	3.8898	0.0016912	3.1652	0.0013761	434.78037611122505	35.149	1.2526	35.093	34.81	36.063	-0.056381					100	28	4	0	0	0	0.77546	1	2240	2240		31.955	2.1133	1	2671400			27509	5672	18432	18442	31230	31230					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78009033203125	2	434.778754	867.542954	-0.97237	-0.00042277	4.234	0.0018408	3.2616	0.0014181	434.7805193577322	37.104	1.6925	37.05	36.066	37.758	-0.053555					155	37	5	0	0	0	0.62081	3	2440	2429;2440;2452		45.952	5.3719	1	5510500			27510	5672	18432	18442	31231;31232;31233	31232					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7799987792969	2	434.778754	867.542954	-1.2494	-0.00054321	3.5325	0.0015359	2.2831	0.00099266	434.7801616022163	41.477	1.7868	41.436	40.922	42.709	-0.04081					147	45	4	0	0	0	0.77546	1	3127	3127		31.955	2.1133	1	2800900			27511	5672	18432	18442	31234	31234					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7791748046875	2	434.778754	867.542954	-1.1228	-0.00048815	3.4102	0.0014827	2.2874	0.00099453	434.7801032015678	43.351	2.0206	43.315	42.595	44.616	-0.035816					155	47	4	0	0	0	0.77546	1	3436	3436		31.955	3.7006	1	2016300			27512	5672	18432	18442	31235	31235					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.779541015625	2	434.778754	867.542954	-1.003	-0.00043608	3.6101	0.0015696	2.6071	0.0011335	434.7801973515074	45.237	1.8216	45.206	44.189	46.01	-0.031067					113	41	4	0	0	0	0.74721	1	3539	3539		37.159	1.9584	1	1431800			27513	5672	18432	18442	31236	31236					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77947998046875	2	434.778754	867.542954	-0.81007	-0.0003522	3.4341	0.0014931	2.624	0.0011409	434.7801064754335	48.077	2.7534	48.052	47.541	50.295	-0.025112					179	68	4	0	0	0	0.77546	1	4028	4028		31.955	1.4512	1	1940000			27514	5672	18432	18442	31237	31237					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77984619140625	2	434.778754	867.542954	0.15311	6.6568E-05	3.0229	0.0013143	3.176	0.0013809	434.7799826029187	37.007	1.7817	37.018	36.075	37.857	0.011173					164	39	5	0	0	0	0.77546	1	2353	2353		31.955	0	1	5259900			27515	5672	18432	18442	31238	31238					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7795715332031	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.69914	1	3204	3204		40.573	3.5441	1	2766200			27516	5672	18432	18442	31239	31239					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.779052734375	2	434.778754	867.542954	1.0771	0.00046829	1.5251	0.00066307	2.6021	0.0011314	434.77937950289305	55.096	1.7211	55.123	54.502	56.224	0.027138					70	48	2	0	0	0	0.7932	1	4940	4940		25.45	0	1	299790			27517	5672	18432	18442	31240	31240					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7799377441406	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.72402	1	3235	3235		38.806	4.6336	1	1177900			27518	5672	18432	18442	31241	31241					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78009033203125	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.69914	1	1774	1774		40.573	5.3719	1	2251100			27519	5672	18432	18442	31242	31242					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.69914	1	2019	2019		40.573	0	1	4737100			27520	5672	18432	18442	31243	31243					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78021240234375	2	434.778754	867.542954	0.18498	8.0427E-05	2.9584	0.0012863	3.1434	0.0013667	434.7799222967292	39.501	1.6389	39.589	38.953	40.592	0.088375					151	45	4	0	0	0	0.69914	2	2389	2389;2562		40.573	5.3719	1	4736600			27521	5672	18432	18442	31244;31245	31244					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7791442871094	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.7932	1	3072	3072		24.203	4.8428	1	2537300			27522	5672	18432	18442	31246	31246					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.77546	1	3196	3196		31.955	5.1588	1	1327200			27523	5672	18432	18442	31247	31247					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77996826171875	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.69914	1	3376	3376		40.573	5.3719	1	2750200			27524	5672	18432	18442	31248	31248					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7802734375	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.5393	2	2515	2515;2551		50.025	0	1	8013100			27525	5672	18432	18442	31249;31250	31249					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7807312011719	2	434.778754	867.542954	0.35961	0.00015635	3.3799	0.0014695	3.7395	0.0016259	434.78011136196255	36.165	2.4395	36.447	35.432	37.871	0.28173					211	60	5	0	0	0	0.5393	5	2722	2710;2722;2746;2755;2863		50.025	7.5501	1	8602100			27526	5672	18432	18442	31251;31252;31253;31254;31255	31252					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7809753417969	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.77546	1	3627	3627		31.955	2.1133	1	6567600			27527	5672	18432	18442	31256	31256					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.781494140625	2	434.778754	867.542954	-0.97799	-0.00042521	2.2819	0.00099211	1.3039	0.0005669	434.7796012796187	43.693	1.006	44.143	43.436	44.442	0.45024					66	24	3	0	0	0	0.76996	1	3928	3928		33.516	0	1	2290300			27528	5672	18432	18442	31257	31257					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.779541015625	2	434.778754	867.542954	-0.7455	-0.00032413	3.1434	0.0013667	2.3979	0.0010426	434.7799642778913	44.364	1.5041	44.814	44.322	45.826	0.45025					111	36	4	0	0	0	0.67235	1	4094	4094		42.474	7.2737	1	4473900			27529	5672	18432	18442	31258	31258					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78009033203125	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.5393	1	2557	2557		50.025	0	1	7451800			27530	5672	18432	18442	31259	31259					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7803039550781	2	434.778754	867.542954	1.5094	0.00065624	1.8704	0.00081321	3.3798	0.0014694	434.7794635539601	36.504	1.1186	36.944	36.745	37.863	0.44043					77	26	3	0	0	0	0.69914	1	2924	2924		40.573	7.057	1	5607300			27531	5672	18432	18442	31260	31260					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7795104980469	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.77546	1	3369	3369		31.955	3.7006	1	15771000			27532	5672	18432	18442	31261	31261					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77874755859375	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.77546	1	3621	3621		31.955	2.1133	1	6824500			27533	5672	18432	18442	31262	31262					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77960205078125	2	434.778754	867.542954	-0.91901	-0.00039957	3.2028	0.0013925	2.2837	0.00099292	434.7800246732522	44.2	1.4198	45.044	44.534	45.954	0.84437					118	34	4	0	0	0	0.67235	2	4108	4108;4132		42.474	3.6683	1	4932000			27534	5672	18432	18442	31263;31264	31263					0.10388447425293634
LGLVPSAVL	9	Unmodified	_LGLVPSAVL_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77978515625	2	434.778754	867.542954	-0.35442	-0.0001541	2.9005	0.0012611	2.5461	0.001107	434.7798953065686	45.578	1.4443	46.473	45.883	47.327	0.89542					104	35	4	0	0	0	0.62081	1	4240	4240		45.952	3.4775	1	4040300			27535	5672	18432	18442	31265	31265					0.10388447425293634
LGLVRKAI	8	Unmodified	_LGLVRKAI_					0	0	0			REV__ENST00000564987.1_1_16:23535694-23546228:-|nuORF	REV__ENST00000564987.1_1_16:23535694-23546228:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001708984375	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.80706	1	7750	7750		19.36	5.5846	1	6323600	+		27536	17410	18433	18443	31266	31266					0.14627262273359065
LGLVVLGVA	9	Unmodified	_LGLVVLGVA_					0	0	0		nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1;ENSG00000008710|ENST00000262304|PKD1	nc|ENSG00000008710|P98161-2|PKD1	nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.7829284667969	2	420.781296	839.54804	-0.11189	-4.7082E-05	3.7407	0.001574	3.6288	0.0015269	420.782706169146	36.147	2.1489	36.129	35.556	37.705	-0.018677					81	47	3	0	0	0	0.78292	1	2346	2346		29.842	4.3914	1	101430			27537	14737	18434	18444	31267	31267					0.12184751287895779
LGLWAAVD	8	Unmodified	_LGLWAAVD_					0	0	0		ENST00000414380.1_1_9:130511774-130517187:-|nuORF	ENST00000414380.1_1_9:130511774-130517187:-|nuORF	ENST00000414380.1_1_9:130511774-130517187:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59295654296875	2	422.731803	843.449054	-0.6357	-0.00026873	-3.3429	-0.0014132	-3.9786	-0.0016819	422.7304605598033	54.415	0.56004	54.39	54.143	54.703	-0.025955					22	17	2	0	0	0	0.4196	1	4920	4920		29.842	10.482	1	102620			27538	11367	18435	18445	31268	31268					0.021067283229854183
LGLWAPGLR	9	Unmodified	_LGLWAPGLR_					0	0	0		ENSG00000115657|ENST00000265316|ABCB6;ENST00000446716.5_1_2:220081206-220083551:-|nuORF	ENSG00000115657|ENST00000265316|ABCB6	ENSG00000115657|ENST00000265316|ABCB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.795654296875	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.7932	1	4609	4609		24.203	0	1	703950			27539	2864	18436	18446	31269	31269					0.08446074267988024
LGMITGTLIL	10	Unmodified	_LGMITGTLIL_					0	0	0		ENSG00000183018|ENST00000329078|SPNS2	ENSG00000183018|ENST00000329078|SPNS2	ENSG00000183018|ENST00000329078|SPNS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3137817382812	2	516.312103	1030.60965	-0.047196	-2.4368E-05	3.3567	0.0017331	3.3095	0.0017087	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.86589	1	10772	10772		29.15	1.2673	1	63062000			27540	7492	18437	18447	31270	31270					0.09557314924904858
LGMITGTLIL	10	Unmodified	_LGMITGTLIL_					0	0	0		ENSG00000183018|ENST00000329078|SPNS2	ENSG00000183018|ENST00000329078|SPNS2	ENSG00000183018|ENST00000329078|SPNS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3147583007812	2	516.312103	1030.60965	1.9037	0.0009829	1.7854	0.00092181	3.6891	0.0019047	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.84112	1	12029	12029		37.159	1.5408	1	22616000			27541	7492	18437	18447	31271	31271					0.09557314924904858
LGMLFFVL	8	Unmodified	_LGMLFFVL_					0	0	0			REV__ENST00000518025.5_1_5:141017849-141019494:+|nuORF	REV__ENST00000518025.5_1_5:141017849-141019494:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.2721252441406	2	470.27225	938.529947	0.69739	0.00032796	-0.89551	-0.00042113	-0.19812	-9.3169E-05	470.2717761018985	92.152	2.8924	92.309	91.308	94.201	0.15649					149	68	4	0	0	0	0.88393	1	9333	9333		33.493	3.6514	1	1938200	+		27542	28059	18438	18448	31272	31272					0.05822293041535431
LGMLPAWL	8	Unmodified	_LGMLPAWL_					0	0	0		ENST00000319933.6_1_5:102612416-102612584:+|nuORF	ENST00000319933.6_1_5:102612416-102612584:+|nuORF	ENST00000319933.6_1_5:102612416-102612584:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7535705566406	2	450.754224	899.493896	-1.2723	-0.00057347	0.24945	0.00011244	-1.0228	-0.00046103	450.75442807514344	77.857	0.36154	77.983	77.82	78.182	0.12538					16	11	2	0	0	0	0.84567	1	7333	7333		24.504	0	1	44004			27543	10023	18439	18449	31273	31273					0.040128358646711604
LGMLPAWL	8	Unmodified	_LGMLPAWL_					0	0	0		ENST00000319933.6_1_5:102612416-102612584:+|nuORF	ENST00000319933.6_1_5:102612416-102612584:+|nuORF	ENST00000319933.6_1_5:102612416-102612584:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	450.754224	899.493896	-1.4182	-0.00063925	-0.57704	-0.0002601	-1.9952	-0.00089936	450.75419330963894	77.899	0.13171	77.99	77.933	78.065	0.091431	0.0036341	-0.00052344	NaN	24.504	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20334			27544	10023	18439	18449							0.040128358646711604
LGNFLRVI	8	Unmodified	_LGNFLRVI_					0	0	0		ENST00000543590.1_1_12:123355407-123355842:-|nuORF	ENST00000543590.1_1_12:123355407-123355842:-|nuORF	ENST00000543590.1_1_12:123355407-123355842:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2898864746094	2	466.28982	930.565087	-0.64111	-0.00029894	0.64441	0.00030048	0.0033003	1.5389E-06	466.28999408550436	73.948	1.2575	73.992	73.721	74.978	0.043648					98	48	3	0	0	0	0.91005	1	7174	7174		42.474	5.446	1	991630			27545	13556	18440	18450	31274	31274					0.09702671893705883
LGNHMKKM	8	Unmodified	_LGNHMKKM_					0	0	0			REV__nc|ENSG00000180481|Q4G1C9-2|GLIPR1L2	REV__nc|ENSG00000180481|Q4G1C9-2|GLIPR1L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.25616455078125	2	479.75169	957.488827	0.1967	9.4366E-05	-0.57009	-0.0002735	-0.37339	-0.00017914	479.7511384255675	31.142	0.66008	31.16	30.879	31.539	0.01836					33	16	3	0	0	0	0.884	1	1689	1689		33.516	1.5607	1	158910	+		27546	30069	18441	18451	31275	31275					0.008382087304198649
LGNLRSLLQIL	11	Unmodified	_LGNLRSLLQIL_					0	0	0		ENSG00000197324|ENST00000359591|LRP10;nc|ENSG00000197324|Q7Z4F1-2|LRP10	ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9325866699219	3	413.930962	1238.77106	1.6433	0.00068023	2.1649	0.00089611	3.8082	0.0015763	413.9318142026393	43.114	2.2589	43.114	42.157	44.416	0.00016785					149	54	3	0	0	0	0.72374	1	3317	3317		27.644	4.266	1	500010			27547	8154	18442	18452	31276	31276					0.1612220028232514
LGNNEIYN	8	Unmodified	_LGNNEIYN_					0	0	0		ENSG00000137269|ENST00000370888|LRRC1;nc|ENSG00000137269|Q9BTT6-2|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7232360839844	2	468.724707	935.43486	0.11016	5.1635E-05	-2.9585	-0.0013867	-2.8484	-0.0013351	468.7232430408737	87.316	0.58432	87.763	87.556	88.141	0.44628					25	13	2	0	0	0	0.91982	1	10240	10240		45.972	0.020292	1	785520			27548	4185	18443	18453	31277	31277					-0.03543968895951366
LGNPHLDA	8	Unmodified	_LGNPHLDA_					0	0	0			REV__ENSG00000111799|ENST00000322507|COL12A1	REV__ENSG00000111799|ENST00000322507|COL12A1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.7146911621094	2	418.716685	835.418816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.3	1	64.423	63.923	64.923	0.12397								0	0	0	0.30252	1	5669	5669		19.36	1.0356	1		+		27549	17895	18444	18454	31278	31278					-0.00547630342202865
LGNRSWRINV	10	Unmodified	_LGNRSWRINV_					0	0	0			REV__nc|ENSG00000100767|O95428-2|PAPLN	REV__nc|ENSG00000100767|O95428-2|PAPLN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.56475830078125	3	405.563273	1213.66799	1.3822	0.00056055	1.7193	0.00069727	3.1014	0.0012578	405.89828618709805	61.013	0.68465	61.044	60.43	61.114	0.0312					51	24	3	0	0	0	0.86218	1	5667	5667		37.508	4.7576	1	508750	+		27550	28713	18445	18455	31279	31279					0.06970132614378599
LGNTHPKI	8	Unmodified	_LGNTHPKI_					0	0	0			REV__L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|69|3|sense	REV__L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|69|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25567626953125	2	440.255977	878.497401	-0.8618	-0.00037941	-0.60853	-0.00026791	-1.4703	-0.00064732	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.89494	1	6928	6928		37.159	6.6555	1	1365500	+		27551	29531	18446	18456	31280	31280					0.05329221962904285
LGNTHTRVMS	10	Unmodified	_LGNTHTRVMS_					0	0	0		ENST00000267101.7_1_12:56492320-56492548:+|nuORF	ENST00000267101.7_1_12:56492320-56492548:+|nuORF	ENST00000267101.7_1_12:56492320-56492548:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2901611328125	2	558.28494	1114.55533	3.9256	0.0021916	4.1694	0.0023277	8.095	0.0045193	558.2890747637853	105.47	0.58115	105.66	105.29	105.87	0.18647					53	13	5	0	0	0	0.86348	1	12879	12879		31.53	11.533	1	609290			27552	9526	18447	18457	31281	31281					0.002631158260101074
LGNTSSSEG	9	Unmodified	_LGNTSSSEG_					0	0	0		ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.1917419433594	2	426.190697	850.36684	-1.8586	-0.00079212	3.7618	0.0016033	1.9032	0.00081115	426.1921560826799	96.604	2.3743	96.806	96.232	98.606	0.20241					88	54	3	0	0	0	0.76764	1	9904	9904		34.173	5.023	1	289980			27553	1337	18448	18458	31282	31282					-0.06432838546595576
LGNTSSSEG	9	Unmodified	_LGNTSSSEG_					0	0	0		ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	426.190697	850.36684	-1.6865	-0.00071878	3.6091	0.0015382	1.9226	0.0008194	426.1920130050923	96.575	1.9877	96.806	96.055	98.042	0.23103	0.0074331	0.00056924	NaN	34.173	84	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	334170			27554	1337	18448	18458							-0.06432838546595576
LGNVAIVSP	9	Unmodified	_LGNVAIVSP_					0	0	0			REV__ENSG00000196588|ENST00000355630|MRTFA	REV__ENSG00000196588|ENST00000355630|MRTFA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7805480957031	2	435.258185	868.501818	0.3651	0.00015891	0.93261	0.00040593	1.2977	0.00056484	435.2584521257277	35.953	0.62872	36.2	35.933	36.561	0.2477					27	15	2	0	0	0	0.20789	1	2781	2781		53.351	14.545	1	182690	+		27555	23151	18449	18459	31283	31283					0.06230686385811168
LGNVKRPW	8	Unmodified	_LGNVKRPW_					0	0	0			REV__ENST00000278460.11_1_11:47183282-47183486:+|nuORF	REV__ENST00000278460.11_1_11:47183282-47183486:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.2857971191406	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.806	1	74.851	74.351	75.351	0.04509								0	0	0	0.29631	1	7253	7253		25.45	0	1		+		27556	24594	18450	18460	31284	31284					0.07004903608174118
LGPARPAGA	9	Unmodified	_LGPARPAGA_					0	0	0		ENST00000321265.9_1_1:27248257-27248284:+|nuORF	ENST00000321265.9_1_1:27248257-27248284:+|nuORF	ENST00000321265.9_1_1:27248257-27248284:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.235107421875	2	405.235045	808.455536	-1.9331	-0.00078337	3.99	0.0016169	2.0569	0.00083352	405.2366344721474	23.332	0.59149	23.385	23.164	23.755	0.05291					42	29	2	0	0	0	0.7932	1	747	747		26.796	0	1	48290			27557	10038	18451	18461	31285	31285					0.04364666274364026
LGPDDAVTLAG	11	Unmodified	_LGPDDAVTLAG_					0	0	0		ENST00000496333.5_1_2:24714789-24715008:+|nuORF	ENST00000496333.5_1_2:24714789-24715008:+|nuORF	ENST00000496333.5_1_2:24714789-24715008:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.7682495117188	2	514.766571	1027.51859	0.56456	0.00029062	3.8206	0.0019667	4.3852	0.0022574	514.7684782236842	16.223	0.36644	15.624	15.465	15.832	-0.59873					14	7	3	0	0	0	0.65746	1	100	100		37.812	0.65241	1	135130			27558	12781	18452	18462	31286	31286					0.005931424811024044
LGPENQKQVT	10	Unmodified	_LGPENQKQVT_					0	0	0			REV__ENST00000486765.5_1_1:3806526-3811957:-|nuORF	REV__ENST00000486765.5_1_1:3806526-3811957:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.8299560546875	2	557.29857	1112.58259	0.35008	0.0001951	-0.41065	-0.00022885	-0.06057	-3.3755E-05	557.2982006070566	100.78	0.77453	100.98	100.58	101.36	0.2058					43	18	3	0	0	0	0.37624	1	10583	10583		51.193	20.875	1	263780			27559	23412	18453	18463	31287	31287					0.030799226380622713
LGPGCQSY	8	Carbamidomethyl (C)	_LGPGC(Carbamidomethyl (C))QSY_	LGPGC(1)QSY		LGPGC(51)QSY		0	1	0			REV__chrX:70929002-70929628|42|37.93|0.99|5.25|-|1|SLC7A3,SLC7A3|1	REV__chrX:70929002-70929628|42|37.93|0.99|5.25|-|1|SLC7A3,SLC7A3|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.1953125	2	441.194728	880.374903	1.3728	0.00060569	3.186	0.0014057	4.5589	0.0020114	441.19600127736516	103.65	0.51379	103.84	103.6	104.11	0.18888					28	12	3	0	0	0	0.93293	1	12599	12599		51.335	6.8044	1	649240	+		27560	15954	18454	18464	31288	31288	211				-0.07006982830841935
LGPGEPAEEP	10	Unmodified	_LGPGEPAEEP_					0	0	0			REV__ENSG00000205307|ENST00000622764|SAP25	REV__ENSG00000205307|ENST00000622764|SAP25	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.3364562988281	2	498.237647	994.460741	-0.30999	-0.00015445	-1.78	-0.00088688	-2.09	-0.0010413	498.23670374223946	74.509	0.61401	74.465	74.211	74.825	-0.043877					33	20	2	0	0	0	0.37624	1	7342	7342		51.335	0	1	81622	+		27561	23548	18455	18465	31289	31289					-0.0367111944434555
LGPGEPAEEP	10	Unmodified	_LGPGEPAEEP_					0	0	0			REV__ENSG00000205307|ENST00000622764|SAP25	REV__ENSG00000205307|ENST00000622764|SAP25	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	498.237647	994.460741	-0.070651	-3.5201E-05	-2.1252	-0.0010589	-2.1958	-0.0010941	498.2366140715692	74.631	0.45525	74.674	74.46	74.915	0.0429	0.13215	-0.00041441	NaN	51.335	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57734	+		27562	23548	18455	18465							-0.0367111944434555
LGPGTWFK	8	Unmodified	_LGPGTWFK_					0	0	0		ENST00000473483.1_1_1:201182298-201185067:+|nuORF;nc|ENSG00000163395|Q86VF2-3|IGFN1;nc|ENSG00000163395|Q86VF2-2|IGFN1;nc|ENSG00000163395|Q86VF2-4|IGFN1;nc|ENSG00000163395|Q86VF2|IGFN1;ENSG00000163395|ENST00000335211|IGFN1	ENST00000473483.1_1_1:201182298-201185067:+|nuORF;nc|ENSG00000163395|Q86VF2-4|IGFN1	nc|ENSG00000163395|Q86VF2-4|IGFN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.2454528808594	2	453.247621	904.480688	0.49279	0.00022335	-1.3467	-0.0006104	-0.85393	-0.00038704	453.24688966257435	31.07	0.7603	31.059	30.668	31.428	-0.010656					29	18	2	0	0	0	0.88915	1	1664	1664		35.201	1.6851	1	71636			27563	5793;12282	18456	18466	31290	31290					0.024627210769381236
LGPLCRAGG	9	Unmodified	_LGPLCRAGG_					0	0	0			REV__nc|ENSG00000133460|Q9BYW1-2|SLC2A11	REV__nc|ENSG00000133460|Q9BYW1-2|SLC2A11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2277526855469	2	422.228905	842.443257	-1.7987	-0.00075945	-0.29318	-0.00012379	-2.0918	-0.00088324	422.2287015198112	64.24	0.93478	64.36	64.014	64.949	0.12005					82	33	3	0	0	0	0.7932	1	5693	5693		18.324	1.6194	1	614800	+		27564	26288	18457	18467	31291	31291					0.015733065396716484
LGPNTAVH	8	Unmodified	_LGPNTAVH_					0	0	0		ENST00000498159.1_1_3:157261259-157287098:+|nuORF;ENST00000312275.9_1_3:157261142-157271066:+|nuORF	ENST00000498159.1_1_3:157261259-157287098:+|nuORF	ENST00000498159.1_1_3:157261259-157287098:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.7195739746094	2	404.719227	807.423902	-1.4523	-0.00058778	0.29127	0.00011788	-1.161	-0.00046989	404.7191322810213	74.551	0.59695	74.637	74.307	74.904	0.085907					30	21	2	0	0	0	0.87064	1	6863	6863		29.15	3.6994	1	64818			27565	9940	18458	18468	31292	31292					0.012486735204220167
LGPPHSRS	8	Unmodified	_LGPPHSRS_					0	0	0		ENSG00000100368|ENST00000403662|CSF2RB;nc|ENSG00000100368|P32927-2|CSF2RB	ENSG00000100368|ENST00000403662|CSF2RB	ENSG00000100368|ENST00000403662|CSF2RB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2949523925781	2	425.730126	849.4457	1.8651	0.00079402	0.74394	0.00031672	2.609	0.0011107	425.7301814419502	75.309	0.20872	75.356	75.279	75.488	0.046448					6	5	2	0	0	0	0.4196	1	7332	7332		37.159	3.6435	1	14348			27566	1835	18459	18469	31293	31293					0.014954782689983404
LGPPQCSD	8	Unmodified	_LGPPQCSD_					0	0	0		ENST00000393409.2_1_3:126752902-126753223:+|nuORF	ENST00000393409.2_1_3:126752902-126753223:+|nuORF	ENST00000393409.2_1_3:126752902-126753223:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2924499511719	2	408.681453	815.348354	-0.12449	-5.0877E-05	4.4489	0.0018182	4.3244	0.0017673	408.68353537699255	84.11	0.89237	84.561	84.186	85.078	0.45137					30	21	2	0	0	0	0.4196	1	9794	9794		25.45	1.2474	1	64438			27567	11045	18460	18470	31294	31294					-0.06670671722167754
LGPRAPGEH	9	Unmodified	_LGPRAPGEH_					0	0	0		ENST00000464180.1_1_17:39976744-39976852:+|nuORF	ENST00000464180.1_1_17:39976744-39976852:+|nuORF	ENST00000464180.1_1_17:39976744-39976852:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.232421875	2	467.248683	932.482814	0.17686	8.2637E-05	-2.2501	-0.0010514	-2.0733	-0.00096874	467.2475503412987	66.957	0.54176	67.342	67.051	67.593	0.38515					21	16	2	0	0	0	0.20789	1	7343	7343		23.042	0	1	170250			27568	12085	18461	18471	31295	31295					0.013871498147523198
LGPRGRGV	8	Unmodified	_LGPRGRGV_					0	0	0		ENST00000382882.7_2_4:2011010-2011436:-|nuORF	ENST00000382882.7_2_4:2011010-2011436:-|nuORF	ENST00000382882.7_2_4:2011010-2011436:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2474365234375	2	406.248486	810.48242	3.1805	0.0012921	-2.5321	-0.0010287	0.64845	0.00026343	406.2473596194762	111.52	0.96954	111.55	111.15	112.12	0.030388					88	37	3	0	0	0	0.80963	1	12253	12253		15.636	0	1	158570			27569	10978	18462	18472	31296	31296					0.06959774885558545
LGPRGRVGG	9	Unmodified	_LGPRGRVGG_					0	0	0			REV__ENST00000204961.4_1_X:68060969-68061182:+|nuORF	REV__ENST00000204961.4_1_X:68060969-68061182:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7606201171875	2	434.759218	867.503883	-0.5629	-0.00024473	4.1559	0.0018068	3.593	0.0015621	434.76067973092415	87.168	2.0805	87.623	86.978	89.058	0.45429					87	50	3	0	0	0	0.76996	1	10284	10284		33.516	1.5607	1	1032200	+		27570	24101	18463	18473	31297	31297					0.06483159914284897
LGPSSAMTDS	10	Unmodified	_LGPSSAMTDS_					0	0	0		ENST00000359591.8_1_14:23347513-23347717:+|nuORF	ENST00000359591.8_1_14:23347513-23347717:+|nuORF	ENST00000359591.8_1_14:23347513-23347717:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2182312011719	2	483.215857	964.417161	1.439	0.00069534	3.8154	0.0018436	5.2544	0.002539	483.2175364519283	91.538	1.5563	91.988	91.179	92.736	0.44958					62	36	2	0	0	0	0.86589	1	10879	10879		29.15	1.2673	1	367670			27571	10433	18464	18474	31298	31298					-0.06647052213111238
LGPVLVSY	8	Unmodified	_LGPVLVSY_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	424.250244140625	2	424.249829	846.485105	-0.96204	-0.00040814	1.4699	0.00062359	0.50782	0.00021544	424.25046651193156	107.31	0.79755	107.31	106.93	107.73	0					66	18	4	0	0	0	0.87276	1	11168	11168		29.842	5.3375	1	4999300	+		27572	18541	18465	18475	31299	31299					0.05572185499852367
LGPVLVSY	8	Unmodified	_LGPVLVSY_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.25018310546875	2	424.249829	846.485105	-1.8671	-0.00079214	2.2977	0.00097481	0.43057	0.00018267	424.250891156039	107.16	1.149	107.19	106.72	107.87	0.036125					99	27	5	0	0	0	0.89457	1	11398	11398		37.028	0	1	9677200	+		27573	18541	18465	18475	31300	31300					0.05572185499852367
LGPVLVSY	8	Unmodified	_LGPVLVSY_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2507629394531	2	424.249829	846.485105	2.211	0.00093801	-1.2738	-0.00054042	0.93718	0.0003976	424.249377193164	107.05	1.1854	107.15	106.72	107.9	0.10396					163	44	6	0	0	0	0.87276	1	13070	13070		29.842	0	1	22757000	+		27574	18541	18465	18475	31301	31301					0.05572185499852367
LGPVLVSY	8	Unmodified	_LGPVLVSY_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.24993896484375	2	424.249829	846.485105	4.6708	0.0019816	-3.7108	-0.0015743	0.95999	0.00040727	424.2483274707268	107.02	1.3116	107.17	106.66	107.97	0.14929					169	50	5	0	0	0	0.86791	1	13128	13128		28.254	3.7503	1	20368000	+		27575	18541	18465	18475	31302	31302					0.05572185499852367
LGQAKQAAH	9	Unmodified	_LGQAKQAAH_					0	0	0		ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	462.2552490234375	2	462.256508	922.498464	-0.074127	-3.4265E-05	-1.5925	-0.00073613	-1.6666	-0.00077039	462.2555518247335	55.049	0.93565	55.041	54.521	55.456	-0.0077095					49	26	2	0	0	0	0.76996	1	4869	4869		33.516	1.5607	1	295440			27576	7970	18466	18476	31303	31303					0.03411436331793993
LGQFVRVI	8	Unmodified	_LGQFVRVI_					0	0	0			REV__ENSG00000172888|ENST00000339296|ZNF621	REV__ENSG00000172888|ENST00000339296|ZNF621	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.2882080078125	2	466.28982	930.565087	-1.2303	-0.0005737	1.203	0.00056094	-0.027368	-1.2762E-05	466.29024869048817	74.015	1.0053	74.101	73.822	74.827	0.085907					87	43	3	0	0	0	0.92973	1	6842	6842		50.025	5.9077	1	935090	+		27577	21861	18467	18477	31304	31304					0.09702671893705883
LGQQLQLKVQR	11	Unmodified	_LGQQLQLKVQR_					0	0	0		nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-2|CUX1;ENSG00000257923|ENST00000292535|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-6|CUX1;nc|ENSG00000257923|P39880-4|CUX1;ENST00000558836.5_1_7:101575863-101926379:+|nuORF;nc|ENSG00000257923|Q13948-9|CUX1;nc|ENSG00000257923|Q13948-10|CUX1;nc|ENSG00000257923|Q13948-2|CUX1;nc|ENSG00000257923|Q13948|CUX1;ENST00000560541.5_1_7:101556607-101926379:+|nuORF;ENST00000497815.5_1_7:101459310-101755188:+|nuORF	nc|ENSG00000257923|P39880-5|CUX1	nc|ENSG00000257923|P39880-5|CUX1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.60382080078125	3	437.601616	1309.78302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.062	1	55.062	54.562	55.562	0								0	0	0	0.56276	1	4655	4655		17.833	0	1				27578	8909	18468	18478	31305	31305					0.14051817025506352
LGQRGKKIG	9	Unmodified	_LGQRGKKIG_					0	0	0			REV__nc|ENSG00000140479|P29122-3|PCSK6	REV__nc|ENSG00000140479|P29122-3|PCSK6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.8053283691406	2	478.803626	955.592698	0.24724	0.00011838	4.3933	0.0021035	4.6405	0.0022219	478.8055593968592	41.183	1.271	41.256	40.938	42.209	0.073414					62	33	2	0	0	0	0.78058	1	2753	2753		30.504	1.3541	1	199990	+		27579	19624	18469	18479	31306	31306					0.11312575153942817
LGQVVRRLCA	10	Unmodified	_LGQVVRRLCA_					0	0	0		nc|ENSG00000105122|Q86YV0-2|RASAL3;ENSG00000105122|ENST00000343625|RASAL3	nc|ENSG00000105122|Q86YV0-2|RASAL3	nc|ENSG00000105122|Q86YV0-2|RASAL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.8291015625	2	557.829317	1113.64408	0.85904	0.0004792	1.7636	0.00098378	2.6226	0.001463	557.8303228390891	100.95	1.6407	101.1	100.55	102.19	0.14352					87	39	3	0	0	0	0.85466	1	10540	10540		20.947	2.6848	1	700710			27580	2185	18470	18480	31307	31307					0.09180575856362339
LGRAGGAATTP	11	Unmodified	_LGRAGGAATTP_					0	0	0		ENST00000377113.5_1_10:21783153-21783399:-|nuORF	ENST00000377113.5_1_10:21783153-21783399:-|nuORF	ENST00000377113.5_1_10:21783153-21783399:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.2670593261719	2	486.267073	970.519593	-0.087647	-4.262E-05	0.30406	0.00014785	0.21641	0.00010523	486.26710603472304	86.356	4.0954	86.423	85.117	89.212	0.067444					314	95	4	0	0	0	0.60058	1	8705	8705		44.377	1.981	1	1700900			27581	10828	18471	18481	31308	31308					0.033154016406342635
LGRAGGAHSPG	11	Unmodified	_LGRAGGAHSPG_					0	0	0			REV__ENST00000269346.8_1_17:72209689-72233491:+|nuORF	REV__ENST00000269346.8_1_17:72209689-72233491:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.2579040527344	2	490.25704	978.499526	1.5736	0.00077149	0.44195	0.00021667	2.0156	0.00098816	490.25714425919216	107.1	2.1346	107.2	105.77	107.9	0.10396					168	84	3	0	0	0	0.7342	1	13053	13053		25.574	1.0549	1	1431500	+		27582	24523	18472	18482	31309	31309					0.009416507007017572
LGRALSGTLN	10	Unmodified	_LGRALSGTLN_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|129|3|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|129|3|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|129|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2914733886719	2	501.290548	1000.56654	-0.50311	-0.0002522	0.25574	0.0001282	-0.24737	-0.000124	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.85981	1	8368	8368		35.152	2.3396	1	10459000			27583	14502	18473	18483	31310	31310					0.06628261191804086
LGRARRVK	8	Unmodified	_LGRARRVK_					0	0	0			REV__nc|ENSG00000157326|Q9BTZ2-7|DHRS4	REV__nc|ENSG00000157326|Q9BTZ2-7|DHRS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.31414794921875	2	478.317235	954.619916	-2.1506	-0.0010287	-4.2374	-0.0020268	-6.3881	-0.0030555	478.3151548625913	35.424	0.97868	35.431	35.091	36.07	0.0063934					40	21	3	0	0	0	0.85277	1	2242	2242		25.45	1.2474	1	51011	+		27584	29951	18474	18484	31311	31311					0.14079103484982625
LGRATSHK	8	Unmodified	_LGRATSHK_					0	0	0			REV__nc|ENSG00000197555|O43166-3|SIPA1L1	REV__nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2521667480469	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.89679	1	8150	8150		37.812	7.3079	1	2823900	+		27585	23244	18475	18485	31312	31312					0.04839453677379879
LGRATSHK	8	Unmodified	_LGRATSHK_					0	0	0			REV__nc|ENSG00000197555|O43166-3|SIPA1L1	REV__nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2523498535156	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.88601	1	8363	8363		34.173	5.9183	1	3292300	+		27586	23244	18475	18485	31313	31313					0.04839453677379879
LGRATSHK	8	Unmodified	_LGRATSHK_					0	0	0			REV__nc|ENSG00000197555|O43166-3|SIPA1L1	REV__nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2515869140625	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87792	1	8121	8121		31.53	1.0262	1	3370400	+		27587	23244	18475	18485	31314	31314					0.04839453677379879
LGRCLQPG	8	Unmodified	_LGRCLQPG_					0	0	0			REV__ENST00000316846.2_11:65545618-65547282:-|nuORF	REV__ENST00000316846.2_11:65545618-65547282:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2270202636719	2	422.228905	842.443257	-1.0163	-0.00042911	-0.91112	-0.0003847	-1.9274	-0.00081381	422.2283841733275	63.841	0.75198	63.872	63.292	64.044	0.030247					57	33	3	0	0	0	0.86791	1	5601	5601		28.254	6.5519	1	211120	+		27588	23891	18476	18486	31315	31315					0.015733065396716484
LGRDAEGTE	9	Unmodified	_LGRDAEGTE_					0	0	0		ENSG00000188112|ENST00000341865|C6orf132	ENSG00000188112|ENST00000341865|C6orf132	ENSG00000188112|ENST00000341865|C6orf132	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	474.2226867675781	2	474.225071	946.435589	0.49089	0.00023279	-4.3301	-0.0020534	-3.8392	-0.0018207	474.2228867992903	68.938	0.71165	69.067	68.79	69.502	0.12838					54	30	3	0	0	0	0.77244	1	6221	6221		32.812	1.2826	1	323050			27589	7905	18477	18487	31316	31316					-0.039771742468929006
LGRELPTFL	9	Unmodified	_LGRELPTFL_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|142|3|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|142|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3056030273438	2	523.305667	1044.59678	-0.041393	-2.1661E-05	-4.0495	-0.0021191	-4.0909	-0.0021408	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.69624	1	8545	8545		40.778	3.27	1	3850300	+		27590	29587	18478	18488	31317	31317					0.07626619856978323
LGRFELIGI	9	Unmodified	_LGRFELIGI_					0	0	0		ENST00000445535.1_1_1:161576981-161578004:+|nuORF	ENST00000445535.1_1_1:161576981-161578004:+|nuORF	ENST00000445535.1_1_1:161576981-161578004:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.305908203125	2	509.30821	1016.60187	-0.37346	-0.00019021	-4.2656	-0.0021725	-4.6391	-0.0023627	509.30591642174505	92.904	1.3737	93.13	92.62	93.993	0.22547					101	32	4	0	0	0	0.71772	1	9444	9444		39.253	5.7372	1	2213400			27591	11824	18479	18489	31318	31318					0.09422923719614573
LGRFFQTY	8	Unmodified	_LGRFFQTY_					0	0	0			REV__nc|ENSG00000183495|Q96L91-4|EP400	REV__nc|ENSG00000183495|Q96L91-4|EP400	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3023071289062	2	516.269084	1030.52362	0.57724	0.00029801	2.1982	0.0011349	2.7755	0.0014329	516.270480926713	56.737	0.34264	57.292	57.136	57.479	0.55512					13	7	3	0	0	0	0.4196	1	5907	5907		53.351	16.905	1	222360	+		27592	22609	18480	18490	31319	31319					0.009574911343861459
LGRGFVPA	8	Unmodified	_LGRGFVPA_					0	0	0		ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.73956298828125	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.82464	1	1876	1876		21.702	0	1	1364200			27593	8876	18481	18491	31320	31320					0.0502585427974509
LGRGFVPA	8	Unmodified	_LGRGFVPA_					0	0	0		ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.73968505859375	2	408.739963	815.465373	1.5082	0.00061648	-2.0092	-0.00082126	-0.50101	-0.00020478	408.739095634202	34.891	2.006	35.101	34.812	36.818	0.21003					151	50	4	0	0	0	0.87276	1	2783	2783		29.842	0	1	5089300			27594	8876	18481	18491	31321	31321					0.0502585427974509
LGRGGVLH	8	Unmodified	_LGRGGVLH_					0	0	0			REV__ENST00000369842.8_1_X:153609573-153609861:+|nuORF	REV__ENST00000369842.8_1_X:153609573-153609861:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.74371337890625	2	404.743037	807.471521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.045	1	98.422	97.922	98.922	0.37679								0	0	0	0.29199	1	11842	11842		29.842	0	1		+		27595	25633	18482	18492	31322	31322					0.06008372511280413
LGRGIHLFL	9	Unmodified	_LGRGIHLFL_					0	0	0			REV__ENSG00000198727|ENST00000361789|MT-CYB	REV__ENSG00000198727|ENST00000361789|MT-CYB	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3165283203125	2	513.316369	1024.61818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.771	1	53.765	53.265	54.265	-0.0053711								0	0	0	0.32894	1	4717	4717		20.482	3.7769	1		+		27596	23367	18483	18493	31323	31323					0.10686049676360199
LGRGTGHK	8	Unmodified	_LGRGTGHK_					0	0	0			REV__ENSG00000105738|ENST00000222345|SIPA1L3	REV__ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.23675537109375	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.89043	1	6898	6898		35.618	5.1146	1	1341700	+		27597	17567	18484	18494	31324	31324					0.04243184505901354
LGRGVSSVV	9	Unmodified	_LGRGVSSVV_					0	0	0		nc|ENSG00000164776|Q16816-2|PHKG1;ENSG00000164776|ENST00000297373|PHKG1;ENST00000467726.1_1_7:56154661-56156634:-|nuORF	nc|ENSG00000164776|Q16816-2|PHKG1	nc|ENSG00000164776|Q16816-2|PHKG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2574768066406	2	437.261259	872.507966	0.38317	0.00016754	-0.14147	-6.1861E-05	0.24169	0.00010568	437.26108819056486	23.205	0.57295	22.786	22.544	23.116	-0.41879					21	13	2	0	0	0	0.78983	1	1000	1000		27.882	0	1	85058			27598	6002	18485	18495	31325	31325					0.0666120461733044
LGRHGEQH	8	Unmodified	_LGRHGEQH_					0	0	0		ENSG00000169856|ENST00000305901|ONECUT1	ENSG00000169856|ENST00000305901|ONECUT1	ENSG00000169856|ENST00000305901|ONECUT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7251281738281	2	467.236107	932.457661	-1.1026	-0.00051516	-4.3644	-0.0020392	-5.467	-0.0025544	467.2338522295478	61.961	1.7377	62.35	61.708	63.446	0.38846					67	39	3	0	0	0	0.4196	1	6665	6665		45.952	16.11	1	165250			27599	6530	18486	18496	31326	31326					-0.011269049878137594
LGRIGGFVI	9	Unmodified	_LGRIGGFVI_					0	0	0			REV__ENST00000261509.10_1_4:169848311-169848416:+|nuORF	REV__ENST00000261509.10_1_4:169848311-169848416:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2889404296875	2	466.28982	930.565087	-0.11855	-5.5279E-05	0.27043	0.0001261	0.15188	7.0821E-05	466.2897602326147	74.173	1.0938	74.216	73.973	75.067	0.0429					90	43	3	0	0	0	0.39977	2	7066	7066;7108		57.811	4.3836	1	860010	+		27600	24395	18487	18497	31327;31328	31327					0.09702671893705883
LGRIVFAW	8	Unmodified	_LGRIVFAW_					0	0	0		ENSG00000140688|ENST00000327237|RUSF1;ENST00000541442.5_1_16:31508264-31519694:-|nuORF	ENSG00000140688|ENST00000327237|RUSF1	ENSG00000140688|ENST00000327237|RUSF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.30523681640625	2	481.284537	960.554522	-0.30227	-0.00014548	-0.6873	-0.00033079	-0.98957	-0.00047627	481.28415826693833	17.108	0.22661	16.498	16.386	16.613	-0.6107					6	4	2	0	0	0	0.4196	1	215	215		29.842	5.6388	1	52344			27601	4452	18488	18498	31329	31329					0.07266689239258994
LGRIVFAW	8	Unmodified	_LGRIVFAW_					0	0	0		ENSG00000140688|ENST00000327237|RUSF1;ENST00000541442.5_1_16:31508264-31519694:-|nuORF	ENSG00000140688|ENST00000327237|RUSF1	ENSG00000140688|ENST00000327237|RUSF1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	481.284537	960.554522	0.97094	0.0004673	-1.3602	-0.00065466	-0.3893	-0.00018737	481.283803445642	17.05	0.26162	16.568	16.457	16.718	-0.48256	0.035002	-0.00047849	NaN	29.842	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29306			27602	4452	18488	18498							0.07266689239258994
LGRKAGIVF	9	Unmodified	_LGRKAGIVF_					0	0	0		ENST00000336557.9_1_14:24777962-24779637:-|nuORF;ENST00000258807.5_1_14:24777962-24780611:-|nuORF	ENST00000336557.9_1_14:24777962-24779637:-|nuORF	ENST00000336557.9_1_14:24777962-24779637:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.8006896972656	2	480.803094	959.591636	-0.54823	-0.00026359	-4.2519	-0.0020443	-4.8001	-0.0023079	480.80093903656257	95.17	4.1898	95.217	94.619	98.809	0.046982					308	97	5	0	0	0	0.76996	1	10298	10298		33.516	0.022601	1	18729000			27603	9375	18489	18499	31330	31330					0.1102236078503438
LGRKGQPN	8	Unmodified	_LGRKGQPN_					0	0	0		ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25225830078125	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87479	2	7211	7165;7211		31.955	8.9124	1	1788100			27604	12135	18490	18500	31331;31332	31332					0.04839453677379879
LGRKGQPN	8	Unmodified	_LGRKGQPN_					0	0	0		ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2515869140625	2	435.251226	868.487899	-0.16621	-7.2343E-05	0.40306	0.00017543	0.23685	0.00010309	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.85277	1	7553	7553		25.45	0	1	768200			27605	12135	18490	18500	31333	31333					0.04839453677379879
LGRKGQPN	8	Unmodified	_LGRKGQPN_					0	0	0		ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2521667480469	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.84341	2	8234	8076;8234		31.955	0	1	2823900			27606	12135	18490	18500	31334;31335	31335					0.04839453677379879
LGRKGQPN	8	Unmodified	_LGRKGQPN_					0	0	0		ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2516174316406	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.89494	1	7722	7722		37.159	8.0096	1	3370400			27607	12135	18490	18500	31336	31336					0.04839453677379879
LGRKGQPN	8	Unmodified	_LGRKGQPN_					0	0	0		ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25177001953125	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.84341	2	7407	7407;7775		30.504	1.3541	1	3322700			27608	12135	18490	18500	31337;31338	31337					0.04839453677379879
LGRKGQPN	8	Unmodified	_LGRKGQPN_					0	0	0		ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2514953613281	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.87479	1	7345	7345		30.504	0	1	712390			27609	12135	18490	18500	31339	31339					0.04839453677379879
LGRKGQPN	8	Unmodified	_LGRKGQPN_					0	0	0		ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	ENST00000466423.5_1_1:45471587-45472680:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25201416015625	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.87479	1	7399	7399		30.504	30.504	1	2743300			27610	12135	18490	18500	31340	31340					0.04839453677379879
LGRKLALYFSA	11	Unmodified	_LGRKLALYFSA_					0	0	0		ENST00000529014.5_1_11:10880102-10880318:+|nuORF	ENST00000529014.5_1_11:10880102-10880318:+|nuORF	ENST00000529014.5_1_11:10880102-10880318:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8689575195312	2	619.866423	1237.71829	0.85836	0.00053207	3.8017	0.0023565	4.66	0.0028886	619.8686410709195	93.975	2.8634	94.136	92.286	95.15	0.16119					249	68	4	0	0	0	0.70737	1	9609	9609		30.318	2.2362	1	2724800			27611	13316	18491	18501	31341	31341					0.10894242219501393
LGRKLALYFSA	11	Unmodified	_LGRKLALYFSA_					0	0	0		ENST00000529014.5_1_11:10880102-10880318:+|nuORF	ENST00000529014.5_1_11:10880102-10880318:+|nuORF	ENST00000529014.5_1_11:10880102-10880318:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.86962890625	2	619.866423	1237.71829	0.87763	0.00054401	3.9959	0.0024769	4.8735	0.0030209	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.73893	1	10055	10055		24.519	0.99649	1	6574700			27612	13316	18491	18501	31342	31342					0.10894242219501393
LGRKLALYFSA	11	Unmodified	_LGRKLALYFSA_					0	0	0		ENST00000529014.5_1_11:10880102-10880318:+|nuORF	ENST00000529014.5_1_11:10880102-10880318:+|nuORF	ENST00000529014.5_1_11:10880102-10880318:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.869384765625	2	619.866423	1237.71829	1.7162	0.0010638	3.3936	0.0021036	5.1098	0.0031674	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.73893	2	11472	11365;11472		24.519	0.99649	1	4719500			27613	13316	18491	18501	31343;31344	31344					0.10894242219501393
LGRKLALYFSA	11	Unmodified	_LGRKLALYFSA_					0	0	0		ENST00000529014.5_1_11:10880102-10880318:+|nuORF	ENST00000529014.5_1_11:10880102-10880318:+|nuORF	ENST00000529014.5_1_11:10880102-10880318:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8694458007812	2	619.866423	1237.71829	1.2588	0.00078029	3.961	0.0024553	5.2198	0.0032356	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.70737	1	11586	11586		30.318	4.7437	1	4742500			27614	13316	18491	18501	31345	31345					0.10894242219501393
LGRKVVVV	8	Unmodified	_LGRKVVVV_					0	0	0		ENST00000472481.5_1_19:49990877-49994169:+|nuORF;ENSG00000142541|ENST00000391857|RPL13A;ENST00000488946.1_1_19:49993436-49993604:+|nuORF;ENST00000479992.5_1_19:49990877-49993604:+|nuORF	ENST00000472481.5_1_19:49990877-49994169:+|nuORF	ENST00000472481.5_1_19:49990877-49994169:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3001403808594	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.85787	1	7046	7046		9.4706	0.64823	1	1702600			27615	4569	18492	18502	31346	31346					0.14627262273370434
LGRKVVVV	8	Unmodified	_LGRKVVVV_					0	0	0		ENST00000472481.5_1_19:49990877-49994169:+|nuORF;ENSG00000142541|ENST00000391857|RPL13A;ENST00000488946.1_1_19:49993436-49993604:+|nuORF;ENST00000479992.5_1_19:49990877-49993604:+|nuORF	ENST00000472481.5_1_19:49990877-49994169:+|nuORF	ENST00000472481.5_1_19:49990877-49994169:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3001403808594	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.81724	1	6866	6866		14.664	0.88877	1	1852500			27616	4569	18492	18502	31347	31347					0.14627262273370434
LGRKVVVV	8	Unmodified	_LGRKVVVV_					0	0	0		ENST00000472481.5_1_19:49990877-49994169:+|nuORF;ENSG00000142541|ENST00000391857|RPL13A;ENST00000488946.1_1_19:49993436-49993604:+|nuORF;ENST00000479992.5_1_19:49990877-49993604:+|nuORF	ENST00000472481.5_1_19:49990877-49994169:+|nuORF	ENST00000472481.5_1_19:49990877-49994169:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2997131347656	2	435.300188	868.585822	-1.3785	-0.00060007	1.5278	0.00066505	0.14927	6.4979E-05	435.30073733409733	75.396	1.3729	75.483	74.943	76.316	0.087639					63	36	2	0	0	0	0.81724	1	7077	7077		14.664	0.88877	1	527430			27617	4569	18492	18502	31348	31348					0.14627262273370434
LGRLLFCVSI	10	Carbamidomethyl (C)	_LGRLLFC(Carbamidomethyl (C))VSI_	LGRLLFC(1)VSI		LGRLLFC(46)VSI		0	1	0		ENST00000369037.8_1_6:107473887-107474007:-|nuORF	ENST00000369037.8_1_6:107473887-107474007:-|nuORF	ENST00000369037.8_1_6:107473887-107474007:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3439331054688	2	589.341726	1176.6689	0.15554	9.1664E-05	1.9962	0.0011764	2.1517	0.0012681	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.67571	1	11620	11620		45.972	9.5255	1	10540000			27618	10610	18493	18503	31349	31349	136				0.08763210939059718
LGRLLGIFE	9	Unmodified	_LGRLLGIFE_					0	0	0		nc|ENSG00000173598|Q9NZJ9-3|NUDT4;ENSG00000173598|ENST00000415493|NUDT4;ENSG00000177144|ENST00000322209|NUDT4B	nc|ENSG00000173598|Q9NZJ9-3|NUDT4	nc|ENSG00000173598|Q9NZJ9-3|NUDT4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.3058166503906	2	509.30821	1016.60187	-0.80877	-0.00041191	-3.7898	-0.0019302	-4.5986	-0.0023421	509.30614096875837	93.406	1.6722	93.406	92.938	94.61	0					114	38	4	0	0	0	0.7932	1	9285	9285		24.203	1.1603	1	1703100			27619	6874	18494	18504	31350	31350					0.09422923719614573
LGRLLQYLFYR	11	Unmodified	_LGRLLQYLFYR_					0	0	0			REV__nc|ENSG00000166484|Q13164-3|MAPK7	REV__nc|ENSG00000166484|Q13164-3|MAPK7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.2829895019531	3	481.281995	1440.82415	0.78447	0.00037755	1.5771	0.00075901	2.3615	0.0011366	481.2826753418143	101.45	1.7107	101.6	100.6	102.31	0.14352					107	41	3	0	0	0	0.79224	1	10606	10606		12.957	0.52465	1	602290	+		27620	27639	18495	18505	31351	31351					0.12137578064971422
LGRLLQYLFYR	11	Unmodified	_LGRLLQYLFYR_					0	0	0			REV__nc|ENSG00000166484|Q13164-3|MAPK7	REV__nc|ENSG00000166484|Q13164-3|MAPK7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.2835693359375	3	481.281995	1440.82415	0.78444	0.00037754	2.2393	0.0010777	3.0238	0.0014553	481.2829969862694	102.73	2.2754	102.86	102.06	104.33	0.12622					121	56	3	0	0	0	0.75121	1	10837	10837		21.78	3.9473	1	1192200	+		27621	27639	18495	18505	31352	31352					0.12137578064971422
LGRLNHLH	8	Unmodified	_LGRLNHLH_					0	0	0			REV__ENSG00000179532|ENST00000254579|DNHD1	REV__ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.28143310546875	2	480.280318	958.546083	-0.095812	-4.6016E-05	1.1171	0.00053651	1.0213	0.0004905	480.2805963433813	99.968	1.0838	100.01	99.629	100.71	0.0411					35	24	2	0	0	0	0.86288	1	10615	10615		26.796	0	1	201920	+		27622	22341	18496	18506	31353	31353					0.06515135322649712
LGRLNHLH	8	Unmodified	_LGRLNHLH_					0	0	0			REV__ENSG00000179532|ENST00000254579|DNHD1	REV__ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.280517578125	2	480.280318	958.546083	-0.79233	-0.00038054	1.9476	0.00093537	1.1552	0.00055483	480.2810198106101	99.29	1.2094	99.513	99.088	100.3	0.22262					43	28	2	0	0	0	0.86791	1	10333	10333		28.254	4.0515	1	316870	+		27623	22341	18496	18506	31354	31354					0.06515135322649712
LGRLNHLH	8	Unmodified	_LGRLNHLH_					0	0	0			REV__ENSG00000179532|ENST00000254579|DNHD1	REV__ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2812194824219	2	480.280318	958.546083	2.0773	0.00099766	-0.80311	-0.00038572	1.2741	0.00061195	480.27979970211794	99.254	1.495	99.616	99.254	100.75	0.36136					97	37	4	0	0	0	0.79972	3	12011	11962;11974;12011		62.978	5.5258	1	8902700	+		27624	22341	18496	18506	31355;31356;31357	31357					0.06515135322649712
LGRLNHLH	8	Unmodified	_LGRLNHLH_					0	0	0			REV__ENSG00000179532|ENST00000254579|DNHD1	REV__ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2808532714844	2	480.280318	958.546083	1.0992	0.00052791	0.18402	8.8382E-05	1.2832	0.00061629	480.2802815297023	99.288	1.3371	99.651	99.251	100.59	0.36292					88	33	4	0	0	0	0.79972	4	12002	12002;12025;12048;12074		62.978	3.6218	1	8963900	+		27625	22341	18496	18506	31358;31359;31360;31361	31358					0.06515135322649712
LGRLPSCTGA	10	Unmodified	_LGRLPSCTGA_					0	0	0		ENST00000452859.6_1_17:46184937-46190729:+|nuORF	ENST00000452859.6_1_17:46184937-46190729:+|nuORF	ENST00000452859.6_1_17:46184937-46190729:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7586975097656	2	487.758027	973.5015	0.36374	0.00017742	-0.3185	-0.00015535	0.045233	2.2063E-05	487.75781934835595	24.271	0.61697	23.889	23.491	24.108	-0.38178					22	13	2	0	0	0	0.44803	1	1159	1159		60.118	10.677	1	132580			27626	11930	18497	18507	31362	31362					0.013689433943113727
LGRLRGRVPQM	11	Unmodified	_LGRLRGRVPQM_					0	0	0		ENST00000417979.5_1_21:35003811-35014006:-|nuORF	ENST00000417979.5_1_21:35003811-35014006:-|nuORF	ENST00000417979.5_1_21:35003811-35014006:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8821411132812	2	641.879873	1281.74519	1.9607	0.0012585	2.0579	0.0013209	4.0186	0.0025794	641.8810415769531	95.839	2.2822	95.782	94.474	96.756	-0.057526					187	53	4	0	0	0	0.69995	1	10358	10358		31.53	2.3598	1	1600600			27627	11418	18498	18508	31363	31363					0.11559027559042079
LGRLRGRVPQM	11	Unmodified	_LGRLRGRVPQM_					0	0	0		ENST00000417979.5_1_21:35003811-35014006:-|nuORF	ENST00000417979.5_1_21:35003811-35014006:-|nuORF	ENST00000417979.5_1_21:35003811-35014006:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.882080078125	2	641.879873	1281.74519	1.4722	0.00094496	2.5305	0.0016243	4.0027	0.0025692	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.73893	1	11694	11694		24.519	2.5593	1	4511200			27628	11418	18498	18508	31364	31364					0.11559027559042079
LGRLRTLLPW	10	Unmodified	_LGRLRTLLPW_					0	0	0		nc|ENSG00000213316|Q16873|LTC4S	nc|ENSG00000213316|Q16873|LTC4S	nc|ENSG00000213316|Q16873|LTC4S	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.92205810546875	3	408.92403	1223.75026	-0.18603	-7.607E-05	-4.0259	-0.0016463	-4.2119	-0.0017224	408.9223182552884	104.73	3.6152	104.72	103.66	107.27	-0.014809					241	85	5	0	0	0	0.85694	1	11285	11285		20.837	0	1	2991100			27629	15248	18499	18509	31365	31365					0.14733654693304743
LGRNELLSSA	10	Unmodified	_LGRNELLSSA_					0	0	0			REV__ENST00000338244.5_1_20:4913267-4951466:-|nuORF	REV__ENST00000338244.5_1_20:4913267-4951466:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2935791015625	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.73395	1	9392	9392		42.864	0.46813	1	1864800	+		27630	25215	18500	18510	31366	31366					0.045079399836367884
LGRNELLSSA	10	Unmodified	_LGRNELLSSA_					0	0	0			REV__ENST00000338244.5_1_20:4913267-4951466:-|nuORF	REV__ENST00000338244.5_1_20:4913267-4951466:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2931518554688	2	530.293288	1058.57202	1.6334	0.0008662	-1.7145	-0.0009092	-0.081076	-4.2994E-05	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.73395	1	10734	10734		42.864	1.4377	1	1816400	+		27631	25215	18500	18510	31367	31367					0.045079399836367884
LGRNLMRQKKI	11	Unmodified	_LGRNLMRQKKI_					0	0	0		nc|ENSG00000126858|Q8IXI2-4|RHOT1;nc|ENSG00000126858|Q8IXI2|RHOT1;nc|ENSG00000126858|Q8IXI2-5|RHOT1;nc|ENSG00000126858|Q8IXI2-2|RHOT1;ENSG00000126858|ENST00000545287|RHOT1;nc|ENSG00000126858|Q8IXI2-3|RHOT1	nc|ENSG00000126858|Q8IXI2-4|RHOT1	nc|ENSG00000126858|Q8IXI2-4|RHOT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.94842529296875	3	452.946729	1355.81836	1.1592	0.00052504	2.4878	0.0011268	3.6469	0.0016519	452.947744260499	107.13	1.326	107.16	106.32	107.65	0.035622					97	30	5	0	0	0	0.74405	1	11754	11754		23.378	0.79825	1	2905000			27632	3475	18501	18511	31368	31368					0.1546815628164495
LGRPFRDT	8	Unmodified	_LGRPFRDT_					0	0	0		ENST00000526661.5_1_11:836744-836921:+|nuORF	ENST00000526661.5_1_11:836744-836921:+|nuORF	ENST00000526661.5_1_11:836744-836921:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.2681884765625	2	481.264333	960.514114	-0.22683	-0.00010917	3.4592	0.0016648	3.2324	0.0015556	481.26595108166003	31.627	0.53519	31.576	31.337	31.872	-0.051031					18	11	2	0	0	0	0.86791	1	1791	1791		28.254	0	1	40642			27633	13267	18502	18512	31369	31369					0.03227722848839676
LGRPKSGAGP	10	Unmodified	_LGRPKSGAGP_					0	0	0			REV__ENST00000215582.7_1_19:751151-756959:+|nuORF	REV__ENST00000215582.7_1_19:751151-756959:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.2688293457031	2	470.272158	938.529764	-1.3301	-0.00062551	1.347	0.00063347	0.016922	7.9581E-06	470.27272461569635	91.968	1.6857	92.431	92.02	93.705	0.46249					82	39	3	0	0	0	0.8545	1	11005	11005		36.447	2.2742	1	881790	+		27634	24114	18503	18513	31370	31370					0.05804009365908769
LGRPPPGRG	9	Unmodified	_LGRPPPGRG_					0	0	0		ENSG00000196123|ENST00000563902|MATCAP1;nc|ENSG00000196123|Q68EN5-2|MATCAP1	ENSG00000196123|ENST00000563902|MATCAP1	ENSG00000196123|ENST00000563902|MATCAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.7658996582031	2	453.767043	905.519533	0.25664	0.00011645	-2.955	-0.0013409	-2.6984	-0.0012245	453.7655790571442	42.641	1.9691	42.612	42.161	44.13	-0.029461					74	47	2	0	0	0	0.74721	1	3148	3148		37.159	1.9584	1	288700			27635	8013	18504	18514	31371	31371					0.0629944643133058
LGRPQTLTF	9	Unmodified	_LGRPQTLTF_					0	0	0		ENST00000360612.4_1_22:50356808-50356883:+|nuORF	ENST00000360612.4_1_22:50356808-50356883:+|nuORF	ENST00000360612.4_1_22:50356808-50356883:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7933959960938	2	516.795466	1031.57638	-1.5587	-0.00080555	-2.3442	-0.0012115	-3.9029	-0.002017	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.7932	1	8803	8803		21.96	0.25755	1	755180			27636	10450	18505	18515	31372	31372					0.061854491971644165
LGRQEAGLAL	10	Unmodified	_LGRQEAGLAL_					0	0	0		ENSG00000110811|ENST00000290510|P3H3;nc|ENSG00000110811|Q8IVL6-2|P3H3;ENST00000536140.5_1_12:6939022-6940400:+|nuORF	ENSG00000110811|ENST00000290510|P3H3	ENSG00000110811|ENST00000290510|P3H3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	514.297607421875	2	514.298373	1026.58219	0.77641	0.0003993	-1.7386	-0.00089418	-0.96224	-0.00049488	514.2978580513103	96.313	2.149	96.476	95.152	97.301	0.16316					118	50	3	0	0	0	0.8608	1	9916	9916		34.173	2.6427	1	671130			27637	2544	18506	18516	31373	31373					0.06996547708831713
LGRQKKRLPPM	11	Unmodified	_LGRQKKRLPPM_					0	0	0			REV__ENSG00000135837|ENST00000367607|CEP350	REV__ENSG00000135837|ENST00000367607|CEP350	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.271728515625	3	441.939575	1322.79689	0.63201	0.00027931	-0.073952	-3.2682E-05	0.55806	0.00024663	441.93938161315157	55.264	1.2271	55.292	54.682	55.909	0.027142					77	31	3	0	0	0	0.76251	1	5003	5003		19.263	0	1	422510	+		27638	19256	18507	18517	31374	31374					0.1484077125294334
LGRRGLTTG	9	Unmodified	_LGRRGLTTG_					0	0	0			REV__ENST00000407558.8_1_16:3536345-3536525:+|nuORF	REV__ENST00000407558.8_1_16:3536345-3536525:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774353027344	2	465.777608	929.540663	-0.087401	-4.0709E-05	-0.014423	-6.718E-06	-0.10182	-4.7428E-05	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.78058	1	8275	8275		30.504	0	1	1330000	+		27639	26319	18508	18518	31375	31375					0.07307411740180214
LGRRGLTTG	9	Unmodified	_LGRRGLTTG_					0	0	0			REV__ENST00000407558.8_1_16:3536345-3536525:+|nuORF	REV__ENST00000407558.8_1_16:3536345-3536525:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77740478515625	2	465.777608	929.540663	-1.4399	-0.00067067	1.3241	0.00061674	-0.1158	-5.3938E-05	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.71772	1	7555	7555		39.253	11.371	1	287800	+		27640	26319	18508	18518	31376	31376					0.07307411740180214
LGRRKAAK	8	Unmodified	_LGRRKAAK_					0	0	0		nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C;ENSG00000197879|ENST00000648651|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2744140625	2	450.29851	898.582468	1.7029	0.00076682	-2.9518	-0.0013292	-1.2489	-0.00056237	450.2966023128316	93.121	0.60839	93.059	92.72	93.329	-0.061432					29	14	3	0	0	0	0.4196	1	9832	9832		7.1934	3.509	1	164610			27641	8208	18509	18519	31377	31377					0.12912012219362623
LGRRKASTARS	11	Unmodified	_LGRRKASTARS_					0	0	0		ENST00000487949.4_1_1:6531427-6531640:-|nuORF	ENST00000487949.4_1_1:6531427-6531640:-|nuORF	ENST00000487949.4_1_1:6531427-6531640:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	601.8587646484375	2	601.857452	1201.70035	0.90226	0.00054303	-0.36228	-0.00021804	0.53998	0.00032499	601.8571228928912	103.35	2.581	103.48	103.09	105.68	0.12622					132	64	4	0	0	0	0.75921	1	10962	10962		19.997	3.2794	1	2471100			27642	12614	18510	18520	31378	31378					0.10756920017365701
LGRRKKAPPLV	11	Unmodified	_LGRRKKAPPLV_					0	0	0		ENSG00000123159|ENST00000393033|GIPC1;ENST00000587811.1_1_19:14593203-14593794:-|nuORF	ENSG00000123159|ENST00000393033|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2374572753906	3	412.275063	1233.80336	-0.18792	-7.7474E-05	-2.4558	-0.0010125	-2.6438	-0.00109	412.2739059630957	75.18	0.29678	75.226	75.07	75.367	0.045959					10	8	2	0	0	0	0.17754	1	7214	7214		6.6596	0	1	26395			27643	3263	18511	18521	31379	31379					0.19581032475980464
LGRRQHSRTTA	11	Unmodified	_LGRRQHSRTTA_					0	0	0		ENST00000412918.1_1_1:226844949-226862702:-|nuORF	ENST00000412918.1_1_1:226844949-226862702:-|nuORF	ENST00000412918.1_1_1:226844949-226862702:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3589477539062	2	641.857983	1281.70141	1.7061	0.001095	0.85773	0.00055054	2.5638	0.0016456	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.53361	2	12909	12769;12909		49.536	1.1092	1	27133000			27644	11343	18512	18522	31380;31381	31381					0.071831343862641
LGRSAWPP	8	Unmodified	_LGRSAWPP_					0	0	0		ENST00000317449.4_1_11:62455042-62455312:-|nuORF	ENST00000317449.4_1_11:62455042-62455312:-|nuORF	ENST00000317449.4_1_11:62455042-62455312:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24090576171875	2	442.24287	882.471186	-1.2774	-0.00056493	-3.033	-0.0013413	-4.3104	-0.0019063	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.87922	1	7215	7215		31.955	1.4512	1	716910			27645	9993	18513	18523	31382	31382					0.025249527914184
LGRSSLSQQQL	11	Unmodified	_LGRSSLSQQQL_					0	0	0		ENSG00000173546|ENST00000308508|CSPG4	ENSG00000173546|ENST00000308508|CSPG4	ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.8365478515625	2	608.835851	1215.65715	0.091472	5.5692E-05	1.9719	0.0012006	2.0634	0.0012563	608.8369851284349	111.39	0.74226	111.42	111.27	112.01	0.030388					66	28	3	0	0	0	0.75164	1	12210	12210		21.686	0.73882	1	73763			27646	6866	18514	18524	31383	31383					0.057946854494502986
LGRTLNILFF	10	Unmodified	_LGRTLNILFF_					0	0	0			REV__ENSG00000232593|ENST00000604062|KANTR	REV__ENSG00000232593|ENST00000604062|KANTR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3585205078125	2	597.355691	1192.69683	3.0849	0.0018428	1.4245	0.00085092	4.5094	0.0026937	597.3562180293547	100.36	3.052	100.31	99.202	102.25	-0.052116					175	71	4	0	0	0	0.85466	1	10840	10840		20.947	0.95016	1	3981300	+		27647	23772	18515	18525	31384	31384					0.10818857190770359
LGRVALGGLPL	11	Unmodified	_LGRVALGGLPL_					0	0	0		nc|ENSG00000148204|Q5IJ48-3|CRB2;nc|ENSG00000148204|Q5IJ48-2|CRB2;ENSG00000148204|ENST00000373631|CRB2	nc|ENSG00000148204|Q5IJ48-3|CRB2	nc|ENSG00000148204|Q5IJ48-3|CRB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.34033203125	2	533.342584	1064.67061	-1.5064	-0.00080343	-2.9287	-0.001562	-4.4351	-0.0023654	533.3409139496441	99.132	2.1048	99.317	98.763	100.87	0.18582					141	48	4	0	0	0	0.7342	1	10358	10358		25.574	1.3713	1	1837700			27648	4938	18516	18526	31385	31385					0.14086588019335977
LGRVAPSASAS	11	Unmodified	_LGRVAPSASAS_					0	0	0			REV__chr13:48005001-48037606|63|32.71|0.0|21.64|-|2|TE_info:LTR7,LTR7_dup1935,ERV1,LTR,acceptor,-,48004599,48005001|None,SUCLA2|1	REV__chr13:48005001-48037606|63|32.71|0.0|21.64|-|2|TE_info:LTR7,LTR7_dup1935,ERV1,LTR,acceptor,-,48004599,48005001|None,SUCLA2|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2806091308594	2	508.28018	1014.54581	0.65224	0.00033152	-0.58773	-0.00029873	0.064515	3.2792E-05	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.51007	1	10486	10486		51.193	10.415	1	1819500	+		27649	15579	18517	18527	31386	31386					0.03911670812135526
LGRVKYLIVC	10	Unmodified	_LGRVKYLIVC_					0	0	0		chr5:135941362-135941783|18|12.78|0.09|7.08|+|0|FBXL21P,FBXL21P|1	chr5:135941362-135941783|18|12.78|0.09|7.08|+|0|FBXL21P,FBXL21P|1	chr5:135941362-135941783|18|12.78|0.09|7.08|+|0|FBXL21P,FBXL21P|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353515625	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.27	1	118.25	117.75	118.75	-0.024208								0	0	0	0.45132	1	13099	13099		20.947	0.4651	1				27650	440	18518	18528	31387	31387					0.11479801318728278
LGRVKYLIVC	10	Unmodified	_LGRVKYLIVC_					0	0	0		chr5:135941362-135941783|18|12.78|0.09|7.08|+|0|FBXL21P,FBXL21P|1	chr5:135941362-135941783|18|12.78|0.09|7.08|+|0|FBXL21P,FBXL21P|1	chr5:135941362-135941783|18|12.78|0.09|7.08|+|0|FBXL21P,FBXL21P|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3545532226562	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.73	1	118.7	118.2	119.2	-0.024208								0	0	0	0.45132	1	13155	13155		21.96	1.013	1				27651	440	18518	18528	31388	31388					0.11479801318728278
LGRVKYLIVC	10	Unmodified	_LGRVKYLIVC_					0	0	0		chr5:135941362-135941783|18|12.78|0.09|7.08|+|0|FBXL21P,FBXL21P|1	chr5:135941362-135941783|18|12.78|0.09|7.08|+|0|FBXL21P,FBXL21P|1	chr5:135941362-135941783|18|12.78|0.09|7.08|+|0|FBXL21P,FBXL21P|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3533325195312	2	582.352094	1162.68964	-1.3468	-0.00078434	3.9839	0.00232	2.637	0.0015357	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.85694	1	12298	12298		21.96	1.9631	1	3937500			27652	440	18518	18528	31389	31389					0.11479801318728278
LGRVLRPV	8	Unmodified	_LGRVLRPV_					0	0	0			REV__ENST00000472900.5_1_9:79003480-79009387:-|nuORF	REV__ENST00000472900.5_1_9:79003480-79009387:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.30279541015625	2	455.303262	908.59197	-0.68353	-0.00031122	-0.92729	-0.0004222	-1.6108	-0.00073341	455.3035129562242	72.119	0.66676	72.079	71.77	72.437	-0.04039					47	25	3	0	0	0	0.86288	1	7043	7043		26.796	6.3143	1	124300	+		27653	27271	18519	18529	31390	31390					0.1340178050488703
LGRVVFKLMD	10	Unmodified	_LGRVVFKLMD_					0	0	0		ENST00000462422.5_1_1:246216281-246670414:-|nuORF;ENST00000470863.1_1_1:246490478-246670519:-|nuORF;nc|ENSG00000185420|Q9H7B4-3|SMYD3;ENSG00000185420|ENST00000490107|SMYD3	ENST00000462422.5_1_1:246216281-246670414:-|nuORF	ENST00000462422.5_1_1:246216281-246670414:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3428344726562	2	589.341726	1176.6689	-0.67475	-0.00039766	2.4486	0.0014431	1.7739	0.0010454	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.86218	1	9402	9402		32.812	0	1	5429300			27654	7712	18520	18530	31391	31391					0.08763210939059718
LGRWCPGLG	9	Unmodified	_LGRWCPGLG_					0	0	0		nc|ENSG00000165792|Q9H7H0-2|METTL17;ENSG00000165792|ENST00000339374|METTL17;nc|ENSG00000165792|Q9H7H0-3|METTL17;ENST00000554949.1_1_14:21458161-21458547:+|nuORF;ENST00000557701.5_1_14:21458161-21460365:+|nuORF;ENST00000554985.5_1_14:21458161-21460793:+|nuORF	nc|ENSG00000165792|Q9H7H0-2|METTL17	nc|ENSG00000165792|Q9H7H0-2|METTL17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.7522888183594	2	479.750005	957.485456	-0.23225	-0.00011142	2.8237	0.0013547	2.5914	0.0012432	479.75127670684145	31.252	0.69834	31.201	30.869	31.567	-0.051031					31	16	3	0	0	0	0.3636	1	1738	1738		60.294	9.1013	1	201830			27655	6122	18521	18531	31392	31392					0.005012819480725739
LGRWRKVISP	10	Unmodified	_LGRWRKVISP_					0	0	0		ENST00000313735.10_1_17:26084105-26084228:-|nuORF	ENST00000313735.10_1_17:26084105-26084228:-|nuORF	ENST00000313735.10_1_17:26084105-26084228:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.36962890625	2	606.372207	1210.72986	-0.02762	-1.6748E-05	-4.3787	-0.0026551	-4.4063	-0.0026719	606.3694476526515	94.093	3.5324	94.139	93.078	96.61	0.045456					200	83	3	0	0	0	0.86471	1	9901	9901		30.318	6.795	1	863170			27656	9954	18522	18532	31393	31393					0.13292484033490837
LGRYVGAH	8	Unmodified	_LGRYVGAH_					0	0	0			REV__ENST00000588848.5_3_19:13260422-13260917:-|nuORF	REV__ENST00000588848.5_3_19:13260422-13260917:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26800537109375	2	436.740494	871.466435	-0.73682	-0.0003218	3.0109	0.001315	2.2741	0.00099317	436.741288655293	52.027	1.861	52.004	51.194	53.055	-0.02343					50	44	2	0	0	0	0.4196	1	4486	4486		29.842	17.635	1	48020	+		27657	29150	18523	18533	31394	31394					0.02556068648652854
LGSDLGDAMS	10	Unmodified	_LGSDLGDAMS_					0	0	0		nc|ENSG00000066427|P54252-5|ATXN3;nc|ENSG00000066427|P54252-3|ATXN3;nc|ENSG00000066427|P54252-4|ATXN3;ENSG00000066427|ENST00000644486|ATXN3	nc|ENSG00000066427|P54252-5|ATXN3	nc|ENSG00000066427|P54252-5|ATXN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2186584472656	2	483.215857	964.417161	1.439	0.00069534	3.8154	0.0018436	5.2544	0.002539	483.2175364519283	91.538	1.5563	91.988	91.179	92.736	0.44958					62	36	2	0	0	0	0.5766	1	10893	10893		51.335	7.2187	1	367670			27658	1160	18524	18534	31395	31395					-0.06647052213122606
LGSIRIRVSHT	11	Unmodified	_LGSIRIRVSHT_					0	0	0		nc|ENSG00000265944|J3KSC0|LINC01387	nc|ENSG00000265944|J3KSC0|LINC01387	nc|ENSG00000265944|J3KSC0|LINC01387	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8690795898438	2	619.870028	1237.7255	0.85836	0.00053207	-2.0146	-0.0012488	-1.1562	-0.00071672	619.8686410709195	93.975	2.8634	94.136	92.286	95.15	0.16119					249	68	4	0	0	0	0.67041	1	9701	9701		36.318	3.5052	1	2724800			27659	15307	18525	18535	31396	31396					0.11614974819917734
LGSLDLVILY	10	Unmodified	_LGSLDLVILY_					0	0	0		ENST00000306585.8_1_16:69152191-69152308:-|nuORF	ENST00000306585.8_1_16:69152191-69152308:-|nuORF	ENST00000306585.8_1_16:69152191-69152308:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.3324584960938	2	553.328808	1104.64306	2.7435	0.0015181	3.7877	0.0020958	6.5312	0.0036139	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.84112	1	10470	10470		37.159	8.0096	1	4237100			27660	9863	18526	18536	31397	31397					0.09492639968425465
LGSLLTPVP	9	Unmodified	_LGSLLTPVP_					0	0	0			REV__ENST00000562045.1_1_16:2041147-2041558:+|nuORF	REV__ENST00000562045.1_1_16:2041147-2041558:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.777587890625	2	448.776211	895.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.337	1	69.3	68.8	69.8	-0.036957								0	0	0	0.2969	1	6717	6717		31.955	1.4512	1		+		27661	28790	18527	18537	31398	31398					0.08592143562657384
LGSLPPYGV	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGSLPPYGV_					1	0	0		ENST00000505597.1_1_12:54582453-54582633:-|nuORF;ENST00000513838.5_1_12:54582297-54582633:-|nuORF;ENST00000514685.5_1_12:54577692-54582633:-|nuORF	ENST00000505597.1_1_12:54582453-54582633:-|nuORF	ENST00000505597.1_1_12:54582453-54582633:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7552795410156	2	472.758018	943.501483	-1.0398	-0.00049155	-2.7771	-0.0013129	-3.8168	-0.0018044	472.7566010311961	25.503	0.44019	25.566	25.353	25.793	0.063122					38	21	2	0	0	0	0.67235	1	937	937		42.474	6.8562	1	86145			27662	12924	18528	18538	31399	31399					0.02747266665949155
LGSLTLLPFT	10	Unmodified	_LGSLTLLPFT_					0	0	0		ENST00000346872.7_2_17:37921598-37921754:-|nuORF	ENST00000346872.7_2_17:37921598-37921754:-|nuORF	ENST00000346872.7_2_17:37921598-37921754:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3182373046875	2	531.3157	1060.61685	2.5638	0.0013622	4.2767	0.0022723	6.8404	0.0036344	531.3177191515188	95.1	2.5434	95.042	94.557	97.1	-0.057526					188	59	5	0	0	0	0.86589	1	10280	10280		29.15	1.2673	1	4072600			27663	10312	18529	18539	31400	31400					0.0889637079694694
LGSLWRRPPL	10	Unmodified	_LGSLWRRPPL_					0	0	0			REV__ENST00000395863.7_1_20:55841273-55841597:-|nuORF	REV__ENST00000395863.7_1_20:55841273-55841597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.85595703125	2	597.858932	1193.70331	-1.2962	-0.00077492	-2.7709	-0.0016566	-4.067	-0.0024315	598.3589924641743	94.317	5.5544	94.515	93.356	98.911	0.19827					368	130	4	0	0	0	0.77314	1	9700	9700		40.778	4.3314	1	9481100	+		27664	26126	18530	18540	31401	31401					0.11420795142180395
LGSRGYDADMI	11	Unmodified	_LGSRGYDADMI_					0	0	0			REV__ENST00000302450.10_1_2:113496273-113496327:-|nuORF	REV__ENST00000302450.10_1_2:113496273-113496327:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.2813110351562	2	599.282063	1196.54957	0.36738	0.00022016	-0.86542	-0.00051863	-0.49804	-0.00029846	599.2814398353786	41.758	1.0652	41.831	41.433	42.498	0.073414					72	28	4	0	0	0	0.45916	1	2781	2781		54.776	3.5836	1	2283900	+		27665	24784	18531	18541	31402	31402					-0.04084027476301344
LGSRRLLPWL	10	Unmodified	_LGSRRLLPWL_					0	0	0			REV__ENST00000366503.2_1_1:247202745-247202820:-|nuORF	REV__ENST00000366503.2_1_1:247202745-247202820:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.8720092773438	2	605.874582	1209.73461	-0.046166	-2.7971E-05	-4.162	-0.0025216	-4.2081	-0.0025496	605.8718844200029	100.18	2.006	100.22	99.762	101.77	0.046349					129	46	5	0	0	0	0.80179	1	10782	10782		39.253	8.9351	1	1666000	+		27666	25525	18532	18542	31403	31403					0.13813368176261065
LGSSAKIK	8	Unmodified	_LGSSAKIK_					0	0	0		ENSG00000247746|ENST00000500968|USP51;ENST00000375078.3_1_1:20809917-20810088:-|nuORF;ENSG00000273820|ENST00000621775|USP27X;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22;chr17:21028674-21043626|50|13.74|0.68|4.33|-|ENST00000537526|USP22,USP22;ENSG00000124422|ENST00000261497|USP22	ENSG00000247746|ENST00000500968|USP51;ENST00000478443.1_1_17:20910195-20914666:-|nuORF	ENST00000478443.1_1_17:20910195-20914666:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.25225830078125	2	402.252903	802.491253	-0.18439	-7.417E-05	-0.65186	-0.00026221	-0.83625	-0.00033638	402.2525250450039	21.327	0.45784	20.699	20.494	20.952	-0.62835					20	11	2	0	0	0	0.84341	1	770	770		24.203	0	1	322140			27667	8829;218	18533	18543	31404	31404					0.0821070373136763
LGSSAKIK	8	Unmodified	_LGSSAKIK_					0	0	0		ENSG00000247746|ENST00000500968|USP51;ENST00000375078.3_1_1:20809917-20810088:-|nuORF;ENSG00000273820|ENST00000621775|USP27X;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22;chr17:21028674-21043626|50|13.74|0.68|4.33|-|ENST00000537526|USP22,USP22;ENSG00000124422|ENST00000261497|USP22	ENSG00000247746|ENST00000500968|USP51;ENST00000478443.1_1_17:20910195-20914666:-|nuORF	ENST00000478443.1_1_17:20910195-20914666:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	402.252903	802.491253	1.9978	0.00080362	-2.4856	-0.00099985	-0.48781	-0.00019622	402.2517370864552	21.102	0.51514	20.643	20.461	20.976	-0.4591	-0.027954	-0.00094341	NaN	24.203	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	306690			27668	8829;218	18533	18543							0.0821070373136763
LGSSVKSVQP	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LGSSVKSVQP_					1	0	0		nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1;ENSG00000134369|ENST00000685211|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	522.2892456054688	2	522.290214	1042.56587	0.060787	3.1748E-05	0.021023	1.098E-05	0.08181	4.2728E-05	522.28999387396	36.822	1.0695	36.803	36.509	37.578	-0.018673					41	23	3	0	0	0	0.31985	1	2393	2393		70.816	12.034	1	237130			27669	3931	18534	18544	31405	31405					0.046294217521108294
LGSVIFMI	8	Unmodified	_LGSVIFMI_					0	0	0			REV__nc|ENSG00000066405|P56856-2|CLDN18	REV__nc|ENSG00000066405|P56856-2|CLDN18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2563171386719	2	440.254057	878.493561	0.6738	0.00029664	2.7401	0.0012063	3.4139	0.001503	440.2552029440019	56.238	1.654	56.797	56.541	58.195	0.55953					66	39	3	0	0	0	0.87807	1	5827	5827		31.579	1.7373	1	2122700	+		27670	16522	18535	18545	31406	31406					0.049454161448238665
LGSVIYSI	8	Unmodified	_LGSVIYSI_					0	0	0		ENST00000524089.1_1_16:89238206-89251879:+|nuORF;ENSG00000129910|ENST00000289746|CDH15	ENST00000524089.1_1_16:89238206-89251879:+|nuORF	ENST00000524089.1_1_16:89238206-89251879:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.2459411621094	2	426.247286	850.48002	-1.843	-0.00078557	-1.0037	-0.00042784	-2.8467	-0.0012134	426.2467741737408	87.495	4.0009	87.665	85.686	89.687	0.16922					180	93	4	0	0	0	0.86288	1	8656	8656		26.796	2.5934	1	3180100			27671	3608	18536	18546	31407	31407					0.04879881637236849
LGSVLCLV	8	Unmodified	_LGSVLCLV_					0	0	0		ENST00000511682.1_1_4:169819766-169825111:+|nuORF	ENST00000511682.1_1_4:169819766-169825111:+|nuORF	ENST00000511682.1_1_4:169819766-169825111:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2304382324219	2	402.238407	802.462261	-1.0829	-0.00043559	2.5555	0.0010279	1.4726	0.00059232	402.23880786672527	64.149	0.10481	64.18	64.128	64.233	0.030243					5	4	2	0	0	0	0.4196	1	5634	5634		39.021	9.18	1	15562			27672	13024	18537	18547	31408	31408					0.053128431107325014
LGTGVGRKAAP	11	Unmodified	_LGTGVGRKAAP_					0	0	0		ENST00000395648.7_2_11:44954905-44955061:-|nuORF	ENST00000395648.7_2_11:44954905-44955061:-|nuORF	ENST00000395648.7_2_11:44954905-44955061:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.8091430664062	2	513.806365	1025.59818	0.49949	0.00025664	4.4654	0.0022943	4.9649	0.002551	513.8085653001988	50.032	1.4786	50.48	49.777	51.256	0.4476					85	35	3	0	0	0	0.7144	1	4895	4895		29.17	1.0886	1	1418300			27673	11096	18538	18548	31409	31409					0.08640253945736731
LGTHRAAN	8	Unmodified	_LGTHRAAN_					0	0	0			REV__ENST00000372564.7_1_9:131770089-131770917:-|nuORF	REV__ENST00000372564.7_1_9:131770089-131770917:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.227783203125	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.87064	1	7645	7645		29.15	2.3535	1	634680	+		27674	25723	18539	18549	31410	31410					0.015265941262214255
LGTQILFLASA	11	Unmodified	_LGTQILFLASA_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-2|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3301391601562	2	567.331882	1132.64921	-0.54401	-0.00030863	-2.6363	-0.0014957	-3.1803	-0.0018043	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.62614	1	8701	8701		41.427	7.2541	1	4477200			27675	5938	18540	18550	31411	31411					0.0881915819995811
LGTQVPPEK	9	Unmodified	_LGTQVPPEK_					0	0	0		ENSG00000146950|ENST00000380913|SHROOM2	ENSG00000146950|ENST00000380913|SHROOM2	ENSG00000146950|ENST00000380913|SHROOM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7742919921875	2	484.7742	967.533846	0.75767	0.0003673	-0.3973	-0.0001926	0.36038	0.0001747	484.7737576059385	19.131	0.74899	18.661	18.412	19.161	-0.46967					38	16	4	0	0	0	0.21969	1	480	480		71.877	2.2498	1	678250			27676	4872	18541	18551	31412	31412					0.04878054068956317
LGTWLLCFY	9	Unmodified	_LGTWLLCFY_					0	0	0		ENSG00000138111|ENST00000238936|MFSD13A	ENSG00000138111|ENST00000238936|MFSD13A	ENSG00000138111|ENST00000238936|MFSD13A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	558.2861938476562	2	558.283346	1114.55214	-0.9779	-0.00054595	3.2741	0.0018279	2.2962	0.001282	558.2847818887834	75.353	0.69984	75.44	75.146	75.846	0.087631					35	17	3	0	0	0	0.69914	1	6964	6964		40.573	1.7665	1	171770			27677	4273	18542	18552	31413	31413					-0.0005552728068778379
LGVCRSLQ	8	Unmodified	_LGVCRSLQ_					0	0	0		ENST00000475185.5_1_18:20877516-20877840:-|nuORF	ENST00000475185.5_1_18:20877516-20877840:-|nuORF	ENST00000475185.5_1_18:20877516-20877840:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2440185546875	2	438.242012	874.469472	0.65561	0.00028732	3.5416	0.0015521	4.1972	0.0018394	438.2433791659041	51.77	0.52613	52.437	52.189	52.715	0.66729					24	12	3	0	0	0	0.41376	1	5174	5174		79.939	0.48821	1	848310			27678	12318	18543	18553	31414	31414					0.027215757111662242
LGVFQKLIAS	10	Unmodified	_LGVFQKLIAS_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3267822265625	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.85694	1	12615	12615		21.96	1.013	1	4041000			27679	3317	18544	18554	31415	31415					0.10939479408125408
LGVGLVAGGLG	11	Unmodified	_LGVGLVAGGLG_					0	0	0			REV__ENSG00000139540|ENST00000454355|SLC39A5	REV__ENSG00000139540|ENST00000454355|SLC39A5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79315185546875	2	456.779285	911.544017	0.17864	8.1597E-05	-4.219	-0.0019272	-4.0404	-0.0018456	456.7766613132635	36.246	0.15502	36.349	36.217	36.372	0.10306					6	4	2	0	0	0	0.16043	1	1976	1976		40.573	0	1	19588	+		27680	19548	18545	18555	31416	31416					0.08470661794194712
LGVHLLLAATW	11	Unmodified	_LGVHLLLAATW_					0	0	0		ENSG00000146360|ENST00000275169|GPR6;nc|ENSG00000146360|P46095-2|GPR6	ENSG00000146360|ENST00000275169|GPR6	ENSG00000146360|ENST00000275169|GPR6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.8555908203125	2	597.355691	1192.69683	-0.84393	-0.00050413	1.3726	0.00081991	0.52864	0.00031578	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.77937	1	10951	10951		15.642	1.5047	1	1407500			27681	4837	18546	18556	31417	31417					0.10818857190793096
LGVHMLSK	8	Unmodified	_LGVHMLSK_					0	0	0			REV__chr5:81473551-81473700|60|35.42|0.58|5.93|-|2|TE_info:L1PA8,L1PA8_dup2592,L1,LINE,acceptor,-,81473246,81473551|None,SSBP2|1	REV__chr5:81473551-81473700|60|35.42|0.58|5.93|-|2|TE_info:L1PA8,L1PA8_dup2592,L1,LINE,acceptor,-,81473246,81473551|None,SSBP2|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2312927246094	2	442.754756	883.494958	-0.44416	-0.00019666	-3.0811	-0.0013642	-3.5253	-0.0015608	442.75291829996564	45.665	0.32048	46.561	46.368	46.688	0.89542					13	7	2	0	0	0	0.4196	1	4259	4259		25.45	10.786	1	202170	+		27682	15865	18547	18557	31418	31418					0.04855050233584279
LGVKIIQWLLG	11	Unmodified	_LGVKIIQWLLG_					0	0	0			REV__ENSG00000120756|ENST00000457734|PLS1	REV__ENSG00000120756|ENST00000457734|PLS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.93243408203125	3	413.932303	1238.77508	1.9789	0.00081913	-0.83989	-0.00034766	1.139	0.00047147	413.9318701140447	44.846	2.3922	44.842	44.201	46.593	-0.0041618					170	56	4	0	0	0	0.732	1	3530	3530		26.063	0.9956	1	713740	+		27683	18429	18548	18558	31419	31419					0.16524289776043588
LGVLLRREAPE	11	Unmodified	_LGVLLRREAPE_					0	0	0		ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2523498535156	3	418.250583	1251.72992	1.1284	0.00047194	-3.5105	-0.0014683	-2.3821	-0.00099633	418.24909459803337	34.845	1.7351	35.055	34.234	35.969	0.21003					81	43	3	0	0	0	0.1767	1	2656	2656		18.531	4.445	1	297670			27684	7556	18549	18559	31420	31420					0.11412439242872097
LGVPIEKMKPP	11	Unmodified	_LGVPIEKMKPP_					0	0	0			REV__ENSG00000197768|ENST00000412566|STPG3	REV__ENSG00000197768|ENST00000412566|STPG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9085693359375	3	403.573898	1207.69987	0.57405	0.00023167	1.4947	0.00060321	2.0687	0.00083489	403.57443061209773	82.843	3.1803	82.99	82.289	85.469	0.14694					168	73	3	0	0	0	0.732	1	8124	8124		26.063	0.9374	1	1495300	+		27685	23266	18550	18560	31421	31421					0.10432364253279047
LGVPTGLGH	9	Unmodified	_LGVPTGLGH_					0	0	0			REV__ENST00000512858.1_1_4:88986866-88996843:+|nuORF	REV__ENST00000512858.1_1_4:88986866-88996843:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2950134277344	2	425.742702	849.470852	0.16546	7.0442E-05	-0.88302	-0.00037594	-0.71757	-0.0003055	425.7420631573027	74.596	2.0834	75.155	74.717	76.8	0.55891					94	50	4	0	0	0	0.20789	1	8531	8531		35.201	8.4046	1	1753400	+		27686	18325	18551	18561	31422	31422					0.040095330715644195
LGVRGRPGAR	10	Unmodified	_LGVRGRPGAR_					0	0	0		ENST00000409806.7_2_6:149772227-149772305:-|nuORF	ENST00000409806.7_2_6:149772227-149772305:-|nuORF	ENST00000409806.7_2_6:149772227-149772305:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.81787109375	2	519.817599	1037.62064	1.8559	0.00096475	-0.69551	-0.00036154	1.1604	0.00060321	519.8171404866895	95.918	1.5206	96.339	95.506	97.027	0.42051					101	36	3	0	0	0	0.71042	1	11513	11513		44.117	3.3386	1	1896300			27687	11314	18552	18562	31423	31423					0.10333898134012998
LGVTSPLLPM	10	Unmodified	_LGVTSPLLPM_					0	0	0			REV__ENSG00000101074|ENST00000217043|R3HDML	REV__ENSG00000101074|ENST00000217043|R3HDML	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.2978515625	2	514.296453	1026.57835	0.73156	0.00037624	2.6925	0.0013847	3.4241	0.001761	514.2979640556221	96.413	1.8767	96.461	95.25	97.127	0.047798					96	43	4	0	0	0	0.86589	1	10244	10244		29.15	1.0681	1	532700	+		27688	17239	18553	18563	31424	31424					0.06612741890762663
LGVVPGVIS	9	Unmodified	_LGVVPGVIS_					0	0	0			REV__ENSG00000152348|ENST00000282185|ATG10	REV__ENSG00000152348|ENST00000282185|ATG10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.7633361816406	2	420.763104	839.511654	0.11906	5.0096E-05	-0.076887	-3.2351E-05	0.042173	1.7745E-05	420.76298563984074	80.911	0.56821	81.437	81.161	81.729	0.52676					24	13	2	0	0	0	0.58151	1	9355	9355		47.916	9.1095	1	329780	+		27689	20294	18554	18564	31425	31425					0.08547874391183541
LGVVVIPSV	9	Unmodified	_LGVVVIPSV_					0	0	0		ENST00000262056.13_1_12:53434781-53434886:+|nuORF	ENST00000262056.13_1_12:53434781-53434886:+|nuORF	ENST00000262056.13_1_12:53434781-53434886:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7883605957031	2	441.786579	881.558604	-1.4973	-0.00066148	4.3629	0.0019275	2.8656	0.001266	441.788391738542	44.7	2.6432	44.712	43.395	46.038	0.012058					134	65	3	0	0	0	0.7932	1	3135	3135		25.45	0	1	555340			27690	9429	18555	18565	31426	31426					0.11308733942337312
LGVVVIPSV	9	Unmodified	_LGVVVIPSV_					0	0	0		ENST00000262056.13_1_12:53434781-53434886:+|nuORF	ENST00000262056.13_1_12:53434781-53434886:+|nuORF	ENST00000262056.13_1_12:53434781-53434886:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7880859375	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.76996	1	2645	2645		33.516	0	1	9571700			27691	9429	18555	18565	31427	31427					0.11308733942337312
LGVVVIPSV	9	Unmodified	_LGVVVIPSV_					0	0	0		ENST00000262056.13_1_12:53434781-53434886:+|nuORF	ENST00000262056.13_1_12:53434781-53434886:+|nuORF	ENST00000262056.13_1_12:53434781-53434886:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7882080078125	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.7932	1	3115	3115		19.36	0	1	54520000			27692	9429	18555	18565	31428	31428					0.11308733942337312
LGWEALGR	8	Unmodified	_LGWEALGR_					0	0	0		nc|ENSG00000106948|Q7Z591-6|AKNA	nc|ENSG00000106948|Q7Z591-6|AKNA	nc|ENSG00000106948|Q7Z591-6|AKNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.2481384277344	2	451.248152	900.481751	0.1709	7.7119E-05	1.52	0.00068589	1.6909	0.00076301	451.24869628583264	62.968	1.2225	63.523	62.907	64.129	0.55449					64	28	3	0	0	0	0.85277	1	6764	6764		25.45	0	1	464750			27693	14835	18556	18566	31429	31429					0.027529354458465605
LGWGSRPA	8	Unmodified	_LGWGSRPA_					0	0	0			REV__ENST00000599808.1_1_19:19049406-19049826:-|nuORF	REV__ENST00000599808.1_1_19:19049406-19049826:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2286682128906	2	422.22722	842.439886	-1.0391	-0.00043872	2.9759	0.0012565	1.9369	0.0008178	422.2283416890696	64.395	1.1539	64.425	64.021	65.175	0.030243					96	39	3	0	0	0	0.8347	1	5651	5651		23.042	4.7181	1	492400	+		27694	29303	18557	18567	31430	31430					0.012363797573129887
LGWKSFLLR	9	Unmodified	_LGWKSFLLR_					0	0	0		ENSG00000145860|ENST00000424310|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145;ENST00000518062.1_1_5:158588183-158590023:-|nuORF	ENSG00000145860|ENST00000424310|RNF145	ENSG00000145860|ENST00000424310|RNF145	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.33984375	2	560.337301	1118.66005	3.1377	0.0017581	1.8932	0.0010608	5.0309	0.002819	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.7932	1	11567	11567		23.042	0	1	83033000			27695	4798	18558	18568	31431	31431					0.10546605364879724
LGWLPALSR	9	Unmodified	_LGWLPALSR_					0	0	0		ENST00000291295.13_1_19:47112759-47113158:+|nuORF	ENST00000291295.13_1_19:47112759-47113158:+|nuORF	ENST00000291295.13_1_19:47112759-47113158:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.31689453125	2	506.800552	1011.58655	-0.059193	-2.9999E-05	1.364	0.0006913	1.3049	0.0006613	506.80118380894214	59.471	0.80808	59.457	59.015	59.823	-0.013733					29	21	2	0	0	0	0.20789	1	5402	5402		12.207	0	1	66174			27696	9680	18559	18569	31432	31432					0.08122056922400134
LGYLKQLLN	9	Unmodified	_LGYLKQLLN_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.3175659179688	2	531.321317	1060.62808	-0.6637	-0.00035264	-2.8491	-0.0015138	-3.5128	-0.0018664	531.319555565115	95.322	2.6544	95.322	94.812	97.466	0					162	61	5	0	0	0	0.7932	1	9637	9637		24.203	1.1603	1	1864100	+		27697	18606	18560	18570	31433	31433					0.10019192891104467
LGYPGIPGAAG	11	Unmodified	_LGYPGIPGAAG_					0	0	0		nc|ENSG00000169031|Q01955-2|COL4A3;nc|ENSG00000169031|Q01955-5|COL4A3;nc|ENSG00000169031|Q01955-4|COL4A3;nc|ENSG00000169031|Q01955-3|COL4A3;ENSG00000169031|ENST00000396578|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.761474609375	2	486.761092	971.507631	0.20856	0.00010152	-0.23756	-0.00011563	-0.029002	-1.4117E-05	486.76086709151963	37.199	3.1666	37.684	37.119	40.285	0.48581					216	76	4	0	0	0	0.63354	1	3201	3201		40.573	3.4135	1	2150800			27698	15084	18561	18571	31434	31434					0.02073784897470432
LHAADSEAQRR	11	Unmodified	_LHAADSEAQRR_					0	0	0		ENST00000454190.6_2_3:9956219-9957488:+|nuORF;nc|ENSG00000163701|Q8NFR9-2|IL17RE;ENSG00000163701|ENST00000383814|IL17RE	ENST00000454190.6_2_3:9956219-9957488:+|nuORF	ENST00000454190.6_2_3:9956219-9957488:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3174438476562	2	627.320899	1252.62725	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.895	1	64.015	63.515	64.515	0.12004								0	0	0	0.56276	1	5606	5606		28.081	1.0342	1				27699	5855	18562	18572	31435	31435					0.011037465040772076
LHAGELVA	8	Unmodified	_LHAGELVA_					0	0	0		ENST00000547992.5_1_12:58138858-58140853:+|nuORF;ENST00000257910.7_1_12:58138858-58140023:+|nuORF	ENST00000547992.5_1_12:58138858-58140853:+|nuORF	ENST00000547992.5_1_12:58138858-58140853:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.2293395996094	2	405.229428	808.444303	0.13872	5.6212E-05	-0.14737	-5.9718E-05	-0.0086521	-3.5061E-06	405.22928691132006	47.667	0.97371	48.137	47.815	48.788	0.46941					61	24	5	0	0	0	0.45589	3	4549	4549;4560;4573		77.944	11.133	1	2253600			27700	9363	18563	18573	31436;31437;31438	31436					0.03241844180240605
LHAGELVA	8	Unmodified	_LHAGELVA_					0	0	0		ENST00000547992.5_1_12:58138858-58140853:+|nuORF;ENST00000257910.7_1_12:58138858-58140023:+|nuORF	ENST00000547992.5_1_12:58138858-58140853:+|nuORF	ENST00000547992.5_1_12:58138858-58140853:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.2289123535156	2	405.229428	808.444303	-0.99102	-0.00040159	0.71353	0.00028915	-0.27749	-0.00011245	405.22969449204066	47.476	0.86224	48.399	48.081	48.944	0.92315					46	21	3	0	0	0	0.45589	2	4556	4535;4556		77.944	0	1	2330300			27701	9363	18563	18573	31439;31440	31440					0.03241844180240605
LHAHLLVAFV	10	Unmodified	_LHAHLLVAFV_					0	0	0			REV__nc|ENSG00000079931|Q6UVY6-2|MOXD1	REV__nc|ENSG00000079931|Q6UVY6-2|MOXD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3397216796875	2	560.337301	1118.66005	0.86177	0.00048288	4.2142	0.0023614	5.076	0.0028442	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.85976	1	10692	10692		35.201	13.241	1	126390000	+		27702	16793	18564	18574	31441	31441					0.10546605364902462
LHAKMFPRIKL	11	Unmodified	_LHAKMFPRIKL_					0	0	0			REV__ENSG00000164332|ENST00000296786|UBLCP1	REV__ENSG00000164332|ENST00000296786|UBLCP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.94378662109375	3	451.944437	1352.81148	0.2172	9.8162E-05	-3.0086	-0.0013597	-2.7914	-0.0012615	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.76579	1	4587	4587		18.531	3.8374	1	771970	+		27703	21072	18565	18575	31442	31442					0.14918843401096638
LHALAAGF	8	Unmodified	_LHALAAGF_					0	0	0		ENST00000557803.5_1_14:102802004-102808513:+|nuORF;nc|ENSG00000022976|A8K0R7|ZNF839;ENSG00000022976|ENST00000442396|ZNF839	ENST00000557803.5_1_14:102802004-102808513:+|nuORF	ENST00000557803.5_1_14:102802004-102808513:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.2281494140625	2	400.226688	798.438824	-0.14076	-5.6335E-05	4.0679	0.0016281	3.9271	0.0015717	400.22859684101246	55.169	2.0847	55.161	54.01	56.095	-0.0077095					100	64	3	0	0	0	0.84567	1	4919	4919		24.504	0	1	485630			27704	853	18566	18576	31443	31443					0.0315416538842328
LHALAAGF	8	Unmodified	_LHALAAGF_					0	0	0		ENST00000557803.5_1_14:102802004-102808513:+|nuORF;nc|ENSG00000022976|A8K0R7|ZNF839;ENSG00000022976|ENST00000442396|ZNF839	ENST00000557803.5_1_14:102802004-102808513:+|nuORF	ENST00000557803.5_1_14:102802004-102808513:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.2281188964844	2	400.226688	798.438824	-0.50486	-0.00020206	4.0747	0.0016308	3.5699	0.0014288	400.2285588174541	55.339	1.7133	55.312	54.396	56.109	-0.027279					91	48	3	0	0	0	0.84567	1	5055	5055		24.504	4.0222	1	614190			27705	853	18566	18576	31444	31444					0.0315416538842328
LHALFPGG	8	Unmodified	_LHALFPGG_					0	0	0		nc|ENSG00000142273|Q9ULV8-2|CBLC;ENSG00000142273|ENST00000647358|CBLC	nc|ENSG00000142273|Q9ULV8-2|CBLC	nc|ENSG00000142273|Q9ULV8-2|CBLC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2484436035156	2	406.226688	810.438824	1.6012	0.00065046	1.4203	0.00057695	3.0215	0.0012274	406.2268863746726	88.222	0.40083	88.671	88.313	88.713	0.44892					18	9	3	0	0	0	0.4196	1	10387	10387		10.185	0	1	126070			27706	4555	18567	18577	31445	31445					0.026021653884299667
LHALLLPR	8	Unmodified	_LHALLLPR_					0	0	0			REV__ENST00000491557.2_1_10:77163552-77167502:+|nuORF	REV__ENST00000491557.2_1_10:77163552-77167502:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.8077087402344	2	466.805637	931.596721	0.30307	0.00014147	1.3469	0.00062874	1.65	0.00077022	466.80614400295406	31.083	0.53593	31.081	30.784	31.32	-0.0022526					39	26	2	0	0	0	0.82464	1	1407	1407		21.702	0	1	91132	+		27707	27658	18568	18578	31446	31446					0.12818664647647893
LHATAWLIGLL	11	Unmodified	_LHATAWLIGLL_					0	0	0			REV__nc|ENSG00000188467|Q71RS6-2|SLC24A5	REV__nc|ENSG00000188467|Q71RS6-2|SLC24A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2469482421875	3	403.24477	1206.71248	2.718	0.001096	2.5029	0.0010093	5.2209	0.0021053	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.73621	1	11633	11633		25.126	3.4402	1	15597000	+		27708	23003	18569	18579	31447	31447					0.11739143707859512
LHCHGEDQTGA	11	Unmodified	_LHCHGEDQTGA_					0	0	0		ENST00000421587.6_2_X:41401966-41412974:-|nuORF	ENST00000421587.6_2_X:41401966-41412974:-|nuORF	ENST00000421587.6_2_X:41401966-41412974:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.2446899414062	2	584.246012	1166.47747	-1.7222	-0.0010062	-1.7121	-0.0010003	-3.4343	-0.0020065	584.2448524221044	60.063	1.1625	60.453	60.095	61.257	0.39077					80	31	3	0	0	0	0.5603	1	6426	6426		47.657	5.2612	1	4634700			27709	11465	18570	18580	31448	31448					-0.09910941830025877
LHCMLGAH	8	Unmodified	_LHCMLGAH_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.21014404296875	2	441.209658	880.404763	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.628	1	63.655	63.155	64.155	0.027142								0	0	0	0.29725	1	5964	5964		24.504	2.8017	1		+		27710	30102	18571	18581	31449	31449					-0.04022322366495246
LHCMLGAH	8	Unmodified	_LHCMLGAH_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.2083435058594	2	441.209658	880.404763	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.498	1	64.534	64.034	65.034	0.036446								0	0	0	0.2945	1	5685	5685		33.493	6.6969	1		+		27711	30102	18571	18581	31450	31450					-0.04022322366495246
LHCSAQPVTTR	11	Unmodified	_LHCSAQPVTTR_					0	0	0		ENST00000525625.1_1_11:125884983-125893371:-|nuORF;ENSG00000064309|ENST00000531738|CDON;nc|ENSG00000064309|Q4KMG0|CDON	ENST00000525625.1_1_11:125884983-125893371:-|nuORF	ENST00000525625.1_1_11:125884983-125893371:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.8825988769531	3	404.87664	1211.60809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.41	1	115.47	114.97	115.97	0.05954								0	0	0	0.56276	1	12299	12299		22.562	1.7244	1				27712	1101	18572	18582	31451	31451					0.010750738887963962
LHDMIIKRRK	10	Unmodified	_LHDMIIKRRK_					0	0	0		ENSG00000122644|ENST00000651779|ARL4A	ENSG00000122644|ENST00000651779|ARL4A	ENSG00000122644|ENST00000651779|ARL4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2673034667969	3	437.267691	1308.78124	-1.5729	-0.00068777	2.064	0.00090252	0.49113	0.00021475	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.85259	1	4248	4248		20.03	0.7678	1	4358700			27713	3237	18573	18583	31452	31452					0.13920484735899663
LHDVQRPR	8	Unmodified	_LHDVQRPR_					0	0	0			REV__chr10:72216138-72220060|25|16.36|0.86|4.25|+|1|TE_info:AluSp,AluSp_dup28934,Alu,SINE,acceptor,+,72220060,72220353|ANAPC16,None|3	REV__chr10:72216138-72220060|25|16.36|0.86|4.25|+|1|TE_info:AluSp,AluSp_dup28934,Alu,SINE,acceptor,+,72220060,72220353|ANAPC16,None|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.78802490234375	2	510.788507	1019.56246	-0.41504	-0.000212	3.0562	0.001561	2.6411	0.001349	510.78983913698113	59.312	0.57942	59.406	59.221	59.8	0.094059					23	15	2	0	0	0	0.87922	1	5086	5086		31.955	1.4512	1	95007	+		27714	15480	18574	18584	31453	31453					0.05346216488760547
LHEKGLFPE	9	Unmodified	_LHEKGLFPE_					0	0	0			REV__ENST00000256722.9_2_2:6989383-6989521:-|nuORF	REV__ENST00000256722.9_2_2:6989383-6989521:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7429809570312	2	535.287474	1068.5604	-0.76319	-0.00040853	3.3862	0.0018126	2.623	0.0014041	535.2891589626953	61.754	0.87611	62.143	61.745	62.622	0.38846					33	19	2	0	0	0	0.20789	1	6632	6632		30.318	1.1682	1	347910	+		27715	24333	18575	18585	31454	31454					0.028857429603021956
LHELYSFLE	9	Unmodified	_LHELYSFLE_					0	0	0		chr20:49135931-49143899|15|12.67|0.24|5.7|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143899,49145139|STAU1,None|2;chr20:49135931-49143854|15|14.2|0.47|4.91|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143854,49145139|STAU1,None|2	chr20:49135931-49143899|15|12.67|0.24|5.7|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143899,49145139|STAU1,None|2	chr20:49135931-49143899|15|12.67|0.24|5.7|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143899,49145139|STAU1,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.7926025390625	2	575.792589	1149.57063	0.58792	0.00033852	-0.36745	-0.00021157	0.22047	0.00012695	575.7921375037755	80.343	0.87334	80.48	80.176	81.049	0.13701					67	24	4	0	0	0	0.19953	1	7642	7642		73.975	2.679	1	352450			27716	363	18576	18586	31455	31455					0.0018230589487302495
LHELYSFLE	9	Unmodified	_LHELYSFLE_					0	0	0		chr20:49135931-49143899|15|12.67|0.24|5.7|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143899,49145139|STAU1,None|2;chr20:49135931-49143854|15|14.2|0.47|4.91|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143854,49145139|STAU1,None|2	chr20:49135931-49143899|15|12.67|0.24|5.7|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143899,49145139|STAU1,None|2	chr20:49135931-49143899|15|12.67|0.24|5.7|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143899,49145139|STAU1,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.7926025390625	2	575.792589	1149.57063	-0.39724	-0.00022873	0.74498	0.00042895	0.34774	0.00020023	575.7927658641902	79.89	0.93016	80.44	80.042	80.972	0.54945					51	21	4	0	0	0	0.034856	1	9209	9209		115.46	12.686	1	938180			27717	363	18576	18586	31456	31456					0.0018230589487302495
LHERQRRKKRR	11	Unmodified	_LHERQRRKKRR_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A	REV__ENSG00000153253|ENST00000283254|SCN3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	521.6568603515625	3	521.657341	1561.95019	-1.2934	-0.0006747	0.7323	0.00038201	-0.56108	-0.00029269	521.6576101839959	55.646	1.2053	55.646	55.208	56.414	0					123	38	5	0	0	0	0.80813	1	4786	4786		9.6461	3.9474	1	828200	+		27718	15734	18577	18587	31457	31457					0.1916952241360832
LHERQRRKKRR	11	Unmodified	_LHERQRRKKRR_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A	REV__ENSG00000153253|ENST00000283254|SCN3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	521.9920043945312	3	521.657341	1561.95019	0.0018454	9.6266E-07	-0.31319	-0.00016338	-0.31134	-0.00016241	521.6570438345822	55.201	1.4309	55.194	54.756	56.187	-0.0077057					142	39	5	0	0	0	0.85439	1	4885	4885		5.6988	2.2901	1	1446100	+		27719	15734	18577	18587	31458	31458					0.1916952241360832
LHERQRRKKRR	11	Unmodified	_LHERQRRKKRR_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A	REV__ENSG00000153253|ENST00000283254|SCN3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	521.9912719726562	3	521.657341	1561.95019	-0.024987	-1.3035E-05	-0.63781	-0.00033272	-0.6628	-0.00034575	521.9913051099392	55.372	1.2186	55.345	54.89	56.109	-0.027279					135	32	5	0	0	0	0.81021	1	5088	5088		9.2118	0	1	1514200	+		27720	15734	18577	18587	31459	31459					0.1916952241360832
LHEVDTQYSAL	11	Unmodified	_LHEVDTQYSAL_					0	0	0		ENSG00000140743|ENST00000268383|CDR2	ENSG00000140743|ENST00000268383|CDR2	ENSG00000140743|ENST00000268383|CDR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	638.317626953125	2	638.314417	1274.61428	-0.8486	-0.00054167	4.1824	0.0026697	3.3338	0.002128	638.3170070427124	72.018	1.5366	72.403	71.877	73.413	0.38581					96	36	5	0	0	0	0.58425	1	8097	8097		45.972	1.5951	1	6693700			27721	4456	18578	18588	31460	31460					-0.0120412939866128
LHFCGPLR	8	Unmodified	_LHFCGPLR_					0	0	0			REV__ENST00000306077.4_1_3:14184440-14184560:+|nuORF	REV__ENST00000306077.4_1_3:14184440-14184560:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76873779296875	2	471.752547	941.490542	-0.53807	-0.00025384	2.64	0.0012454	2.1019	0.00099159	471.7542060235819	48.826	0.67996	49.286	48.985	49.665	0.45983					25	16	3	0	0	0	0.4196	1	4739	4739		19.36	0	1	205870	+		27722	24831	18579	18589	31461	31461					0.017455858106927735
LHFEGFAF	8	Unmodified	_LHFEGFAF_					0	0	0			REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2359924316406	2	484.237253	966.459953	-0.10809	-5.2342E-05	-3.444	-0.0016677	-3.552	-0.00172	484.2359966972615	84.849	1.21	85.289	84.903	86.113	0.43967					128	29	6	0	0	0	0.90645	1	9968	9968		41.208	0.63575	1	48653000	+		27723	16563	18580	18590	31462	31462					-0.024618693027036898
LHFIRLLIL	9	Unmodified	_LHFIRLLIL_					0	0	0			REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.8533325195312	2	569.378969	1136.74339	2.8789	0.0016392	1.3757	0.00078331	4.2546	0.0024225	569.3787796172616	102.51	0.19891	102.46	102.34	102.54	-0.047005					8	4	2	0	0	0	0.20789	1	11205	11205		8.2313	0	1	73159	+		27724	26129	18581	18591	31463	31463					0.18048341812755098
LHFKLAEILL	10	Unmodified	_LHFKLAEILL_					0	0	0			REV__ENSG00000187961|ENST00000338591|KLHL17	REV__ENSG00000187961|ENST00000338591|KLHL17	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	598.8757934570312	2	598.873717	1195.73288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.042	1	16.089	15.589	16.589	0.047804								0	0	0	0.45132	1	110	110		23.042	3.0457	1		+		27725	22966	18582	18592	31464	31464					0.14284314367660045
LHFLAIDN	8	Unmodified	_LHFLAIDN_					0	0	0			REV__ENSG00000186452|ENST00000398458|TMPRSS12	REV__ENSG00000186452|ENST00000398458|TMPRSS12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.76898193359375	2	471.75581	941.497067	-0.68828	-0.0003247	0.80094	0.00037785	0.11267	5.3151E-05	471.755829592468	50.539	0.56898	50.516	50.164	50.733	-0.02343					16	13	2	0	0	0	0.4196	1	4398	4398		10.866	0	1	176210	+		27726	22854	18583	18593	31465	31465					0.02397802243035585
LHFLPATV	8	Unmodified	_LHFLPATV_					0	0	0			REV__ENST00000480308.5_1_1:161646774-161647023:+|nuORF	REV__ENST00000480308.5_1_1:161646774-161647023:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2594299316406	2	449.263271	896.511988	-1.6904	-0.00075944	-4.1787	-0.0018773	-5.8691	-0.0026368	449.2612435598619	72.23	1.3235	72.615	72.251	73.575	0.38582					73	31	3	0	0	0	0.86791	1	8025	8025		28.254	4.0515	1	1206100	+		27727	27412	18584	18594	31466	31466					0.059592941110508946
LHFQKLYT	8	Unmodified	_LHFQKLYT_					0	0	0			REV__ENSG00000152465|ENST00000378165|NMT2	REV__ENSG00000152465|ENST00000378165|NMT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8270263671875	2	525.292559	1048.57057	-0.12699	-6.6709E-05	3.6881	0.0019373	3.5611	0.0018706	525.2930640652166	98.887	0.20374	99.11	98.964	99.168	0.22262					6	4	2	0	0	0	0.4196	1	10265	10265		35.201	0	1	62732	+		27728	20300	18585	18595	31467	31467					0.04822350685526544
LHFSLKLGPTR	11	Unmodified	_LHFSLKLGPTR_					0	0	0			REV__ENST00000420717.5_1_2:131116478-131119809:+|nuORF	REV__ENST00000420717.5_1_2:131116478-131119809:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8756713867188	2	634.877322	1267.74009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.87	1	112.89	112.39	113.39	0.016953								0	0	0	0.56276	1	13668	13668		30.318	3.2704	1		+		27729	26490	18586	18596	31468	31468					0.11693046968093768
LHFSLKLGPTR	11	Unmodified	_LHFSLKLGPTR_					0	0	0			REV__ENST00000420717.5_1_2:131116478-131119809:+|nuORF	REV__ENST00000420717.5_1_2:131116478-131119809:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8836059570312	2	634.877322	1267.74009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.51	1	117.45	116.95	117.95	-0.064972								0	0	0	0.56276	1	14038	14038		13.454	0.64233	1		+		27730	26490	18586	18596	31469	31469					0.11693046968093768
LHGIAKQLRQ	10	Unmodified	_LHGIAKQLRQ_					0	0	0		ENST00000498319.2_1_2:233127988-233172255:+|nuORF;ENST00000433430.5_1_2:233125383-233196385:+|nuORF;ENST00000445090.5_1_2:233028172-233195406:+|nuORF;nc|ENSG00000144535|Q8IYB7-2|DIS3L2;ENSG00000144535|ENST00000325385|DIS3L2	ENST00000498319.2_1_2:233127988-233172255:+|nuORF	ENST00000498319.2_1_2:233127988-233172255:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3527221679688	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.84112	1	12840	12840		37.159	5.2042	1	3937500			27731	4716	18587	18597	31470	31470					0.1186360713677459
LHGIFERLKQF	11	Unmodified	_LHGIFERLKQF_					0	0	0		ENST00000507640.1_1_5:61763053-61779022:+|nuORF;ENSG00000086200|ENST00000325324|IPO11;nc|ENSG00000086200|Q9UI26-2|IPO11	ENST00000507640.1_1_5:61763053-61779022:+|nuORF	ENST00000507640.1_1_5:61763053-61779022:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.2672119140625	3	463.266345	1386.7772	0.31847	0.00014754	-0.28031	-0.00012986	0.038157	1.7677E-05	463.2661538167076	56.845	0.76048	57.4	57.006	57.766	0.55512					38	17	3	0	0	0	0.74771	1	5899	5899		22.562	0	1	878060			27732	1553	18588	18598	31471	31471					0.09928718513833701
LHGKYVKV	8	Unmodified	_LHGKYVKV_					0	0	0		ENST00000486890.5_1_1:19927449-19950128:+|nuORF	ENST00000486890.5_1_1:19927449-19950128:+|nuORF	ENST00000486890.5_1_1:19927449-19950128:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28863525390625	2	472.28982	942.565087	-0.91682	-0.000433	-3.6711	-0.0017338	-4.588	-0.0021668	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.86791	1	10220	10220		28.254	0.37203	1	50946000			27733	12590	18589	18599	31472	31472					0.09150671893701201
LHGLQAAVA	9	Unmodified	_LHGLQAAVA_					0	0	0		nc|ENSG00000116584|Q92974-3|ARHGEF2;nc|ENSG00000116584|Q92974-2|ARHGEF2;ENSG00000116584|ENST00000361247|ARHGEF2	nc|ENSG00000116584|Q92974-3|ARHGEF2	nc|ENSG00000116584|Q92974-3|ARHGEF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.255126953125	2	440.255977	878.497401	0.43968	0.00019357	-1.7375	-0.00076495	-1.2978	-0.00057137	440.2550261626726	67.317	0.79267	67.444	67.122	67.915	0.12748					63	30	3	0	0	0	0.78058	1	6035	6035		30.504	2.2494	1	418260			27734	2928	18590	18600	31473	31473					0.05329221962892916
LHGPHARP	8	Unmodified	_LHGPHARP_					0	0	0			REV__ENSG00000137142|ENST00000377694|IGFBPL1	REV__ENSG00000137142|ENST00000377694|IGFBPL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.7448425292969	2	442.746111	883.477669	-1.3962	-0.00061815	-1.378	-0.0006101	-2.7742	-0.0012283	442.74540056601984	89.815	0.93424	90.028	89.692	90.626	0.21271					56	21	3	0	0	0	0.89457	1	8983	8983		37.028	2.8559	1	507040	+		27735	19363	18591	18601	31474	31474					0.03126890742805699
LHGPLRQRR	9	Unmodified	_LHGPLRQRR_					0	0	0			REV__ENST00000527911.5_1_11:46369020-46369200:+|nuORF	REV__ENST00000527911.5_1_11:46369020-46369200:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3297729492188	2	566.844148	1131.67374	-1.3972	-0.00079202	-3.406	-0.0019307	-4.8032	-0.0027227	567.3449656852093	92.65	0.21214	92.842	92.692	92.904	0.19239					5	4	2	0	0	0	0.20789	1	9333	9333		29.15	12.676	1	63739	+		27736	28237	18592	18602	31475	31475					0.1131727591669005
LHGRKRKLL	9	Unmodified	_LHGRKRKLL_					0	0	0			REV__ENST00000469796.6_1_X:108926864-108976514:-|nuORF	REV__ENST00000469796.6_1_X:108926864-108976514:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.3177490234375	2	560.874917	1119.73528	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.988	1	19.988	19.488	20.488	0								0	0	0	0.36148	1	455	455		11.511	0	1		+		27737	27203	18593	18603	31476	31476					0.1802020761597305
LHGTKPKGAG	10	Unmodified	_LHGTKPKGAG_					0	0	0			REV__ENSG00000112238|ENST00000369215|PRDM13	REV__ENSG00000112238|ENST00000369215|PRDM13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.2784118652344	2	483.279983	964.545414	-0.75516	-0.00036495	-1.8052	-0.00087241	-2.5603	-0.0012374	483.279136890224	95.035	1.9592	95.266	94.736	96.695	0.23103					115	46	3	0	0	0	0.86471	1	9824	9824		30.318	3.5216	1	1458300	+		27738	17931	18594	18604	31477	31477					0.06172295882947765
LHGTVLLL	8	Unmodified	_LHGTVLLL_					0	0	0			REV__ENSG00000248385|ENST00000432826|TARM1	REV__ENSG00000248385|ENST00000432826|TARM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.25494384765625	2	433.278921	864.543289	1.8642	0.00080773	3.3434	0.0014486	5.2076	0.0022563	433.28156693988524	107.54	0.15736	107.65	107.51	107.67	0.10396					10	8	2	0	0	0	0.4196	1	13108	13108		29.842	8.1392	1	29231	+		27739	23859	18595	18605	31478	31478					0.10559867145138924
LHHKGYKPL	9	Unmodified	_LHHKGYKPL_					0	0	0		ENST00000488793.1_1_1:218578572-218607636:+|nuORF	ENST00000488793.1_1_1:218578572-218607636:+|nuORF	ENST00000488793.1_1_1:218578572-218607636:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8201293945312	2	546.819276	1091.624	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.67	1	68.798	68.298	69.298	0.12838								0	0	0	0.31472	1	6192	6192		25.45	0.93098	1				27740	12637	18596	18606	31479	31479					0.0818514818802214
LHHPMAVDL	9	Unmodified	_LHHPMAVDL_					0	0	0		ENSG00000143067|ENST00000421812|ZNF697	ENSG00000143067|ENST00000421812|ZNF697	ENSG00000143067|ENST00000421812|ZNF697	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2733154296875	2	516.768394	1031.52224	-1.5896	-0.00082146	0.56633	0.00029266	-1.0233	-0.0005288	516.768349025571	43.574	0.47926	44.348	44.103	44.582	0.77379					15	11	2	0	0	0	0.20789	1	3933	3933		18.324	2.6882	1	339380			27741	4598	18597	18607	31480	31480					0.007735337739632087
LHHPRLQRIV	10	Unmodified	_LHHPRLQRIV_					0	0	0			REV__ENST00000300853.7_1_19:45912063-45912522:-|nuORF	REV__ENST00000300853.7_1_19:45912063-45912522:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	423.5978088378906	3	423.594796	1267.76256	2.7179	0.0011513	3.9844	0.0016878	6.7024	0.0028391	423.5963997730453	105.86	2.6165	105.82	105.15	107.76	-0.037148					224	61	5	0	0	0	0.86201	2	11753	11753;11777		22.58	0.89391	1	6994400	+		27742	24756	18598	18608	31481;31482	31481					0.13938691156363348
LHHRRRKIEV	10	Unmodified	_LHHRRRKIEV_					0	0	0			REV__nc|ENSG00000166153|Q8N2C3|DEPDC4	REV__nc|ENSG00000166153|Q8N2C3|DEPDC4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.9440612792969	3	448.609216	1342.80582	-1.3621	-0.00061104	1.7771	0.0007972	0.41498	0.00018616	448.6097970890054	75.668	1.3969	75.668	74.988	76.385	0					143	49	4	0	0	0	0.86698	1	6829	6829		28.081	2.1898	1	388770	+		27743	21258	18599	18609	31483	31483					0.14812880933641281
LHIAKKLRM	9	Unmodified	_LHIAKKLRM_					0	0	0			REV__nc|ENSG00000168826|Q6ZSB9-4|ZBTB49	REV__nc|ENSG00000168826|Q6ZSB9-4|ZBTB49	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.3527221679688	2	555.352428	1108.6903	1.3083	0.00072658	0.17283	9.5982E-05	1.4812	0.00082256	555.3524110053091	100.9	2.53	100.95	100.38	102.91	0.046356					182	60	5	0	0	0	0.7932	1	10932	10932		25.45	0.93098	1	5418400	+		27744	21525	18600	18610	31484	31484					0.14030640758437585
LHIHTLPV	8	Unmodified	_LHIHTLPV_					0	0	0			REV__ENST00000209728.8_1_17:38447312-38447438:+|nuORF	REV__ENST00000209728.8_1_17:38447312-38447438:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.2804870605469	2	465.281995	928.549437	-1.728	-0.00080402	-2.528	-0.0011762	-4.2561	-0.0019803	465.28067924301723	88.748	2.0508	88.921	88.498	90.549	0.17234					103	47	4	0	0	0	0.82464	1	8820	8820		21.702	0.7554	1	1028800	+		27745	24109	18601	18611	31485	31485					0.08230385376657523
LHIKILHS	8	Unmodified	_LHIKILHS_					0	0	0			REV__ENST00000426405.1_1_X:73629614-73629932:+|nuORF	REV__ENST00000426405.1_1_X:73629614-73629932:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8002624511719	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.85277	1	9872	9872		25.45	0	1	7439400	+		27746	26543	18602	18612	31486	31486					0.1102236078503438
LHIRGLPRN	9	Unmodified	_LHIRGLPRN_					0	0	0		ENST00000473373.1_1_20:34214700-34215248:-|nuORF	ENST00000473373.1_1_20:34214700-34215248:-|nuORF	ENST00000473373.1_1_20:34214700-34215248:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3259887695312	2	538.327799	1074.64105	1.3454	0.00072427	-3.0293	-0.0016307	-1.6839	-0.00090648	538.3260218082069	100.6	2.6544	100.9	100.26	102.91	0.2999					222	70	6	0	0	0	0.7932	1	12336	12336		25.45	3.4903	1	18713000			27747	12278	18603	18613	31487	31487					0.10671068793840277
LHISELLRTR	10	Unmodified	_LHISELLRTR_					0	0	0			REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.3712768554688	2	619.372404	1236.73025	1.9872	0.0012308	-2.1821	-0.0013515	-0.19486	-0.00012069	619.3705755303217	101.25	1.7847	101.55	101.13	102.91	0.2999					90	48	3	0	0	0	0.85694	1	12257	12257		21.96	1.013	1	2252000	+		27748	20292	18604	18614	31488	31488					0.12135858962687962
LHISGFHLPSK	11	Unmodified	_LHISGFHLPSK_					0	0	0		ENST00000502915.1_1_4:139481866-139482694:+|nuORF	ENST00000502915.1_1_4:139481866-139482694:+|nuORF	ENST00000502915.1_1_4:139481866-139482694:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.3451538085938	2	618.348397	1234.68224	-0.32375	-0.00020019	-3.6593	-0.0022627	-3.9831	-0.0024629	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.43778	1	10384	10384		56.434	12.317	1	926440			27749	12870	18605	18615	31489	31489					0.07428785042657182
LHITLRLK	8	Unmodified	_LHITLRLK_					0	0	0		ENSG00000101353|ENST00000343811|MROH8;nc|ENSG00000101353|Q9H579-2|MROH8;nc|ENSG00000101353|Q9H579|MROH8	ENSG00000101353|ENST00000343811|MROH8	ENSG00000101353|ENST00000343811|MROH8	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.33880615234375	2	497.332019	992.649485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.58	1	114.64	114.14	115.14	0.061073								0	0	0	0.31173	1	12248	12248		9.4706	0	1				27750	1937	18606	18616	31490	31490					0.15286622710448228
LHIVRQAQAK	10	Unmodified	_LHIVRQAQAK_					0	0	0			REV__nc|ENSG00000076944|Q15833-3|STXBP2	REV__nc|ENSG00000076944|Q15833-3|STXBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3535766601562	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.85939	1	12272	12272		23.042	2.0956	1	3937500	+		27751	29713	18607	18617	31491	31491					0.1186360713677459
LHKIFIVFF	9	Unmodified	_LHKIFIVFF_					0	0	0			REV__ENSG00000112796|ENST00000371383|ENPP5	REV__ENSG00000112796|ENST00000371383|ENPP5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3518676757812	2	582.35242	1162.69029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.67	1	116.65	116.15	117.15	-0.02433								0	0	0	0.35623	1	12924	12924		12.959	0.7525	1		+		27752	17967	18608	18618	31492	31492					0.11544964030076699
LHKKCVAPPL	10	Unmodified	_LHKKCVAPPL_					0	0	0		MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|14|3|sense	MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|14|3|sense	MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|14|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3316040039062	2	553.331162	1104.64777	1.2853	0.00071117	0.9147	0.00050613	2.2	0.0012173	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.85939	1	10412	10412		23.042	3.6825	1	4524400			27753	14720	18609	18619	31493	31493					0.09963245630206075
LHKKFIGT	8	Unmodified	_LHKKFIGT_					0	0	0			REV__ENSG00000095110|ENST00000534921|NXPE1	REV__ENSG00000095110|ENST00000534921|NXPE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2869873046875	2	472.28982	942.565087	0.77514	0.00036609	-4.1413	-0.0019559	-3.3662	-0.0015898	472.2880406443957	100.91	1.1997	101.05	100.29	101.49	0.14352					49	28	2	0	0	0	0.84341	1	10558	10558		24.203	1.1603	1	230310	+		27754	17053	18610	18620	31494	31494					0.09150671893723938
LHKKIRPL	8	Unmodified	_LHKKIRPL_					0	0	0			REV__nc|ENSG00000107959|Q5JRX3-3|PITRM1	REV__nc|ENSG00000107959|Q5JRX3-3|PITRM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.8138122558594	2	502.840011	1003.66547	-0.061726	-3.1038E-05	-4.3088	-0.0021666	-4.3705	-0.0021977	502.83705213732577	97.407	0.38326	97.467	97.21	97.593	0.059547					12	8	2	0	0	0	0.4196	1	10263	10263		15.636	6.8139	1	114470	+		27755	17686	18611	18621	31495	31495					0.16378328947359932
LHKKTKKPI	9	Unmodified	_LHKKTKKPI_					0	0	0			REV__nc|ENSG00000130396|P55196-2|AFDN	REV__nc|ENSG00000130396|P55196-2|AFDN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8403930664062	2	546.866226	1091.7179	-1.4625	-0.00079978	-1.5661	-0.00085643	-3.0285	-0.0016562	546.8655246845794	100.66	0.13012	100.83	100.72	100.85	0.17199					4	2	2	0	0	0	0.20789	1	10453	10453		24.203	0	1	59023	+		27756	29839	18612	18622	31496	31496					0.1757086729032835
LHKKTKKPI	9	Unmodified	_LHKKTKKPI_					0	0	0			REV__nc|ENSG00000130396|P55196-2|AFDN	REV__nc|ENSG00000130396|P55196-2|AFDN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8397827148438	2	546.866226	1091.7179	-1.4625	-0.00079977	3.7842	0.0020695	2.3218	0.0012697	546.8680761757321	101.06	0.31821	101.22	100.96	101.28	0.15505					12	7	2	0	0	0	0.20789	1	10501	10501		18.324	0	1	218490	+		27757	29839	18612	18622	31497	31497					0.1757086729032835
LHKLEEGPF	9	Unmodified	_LHKLEEGPF_					0	0	0		ENST00000357115.7_2_4:151935799-151936641:-|nuORF	ENST00000357115.7_2_4:151935799-151936641:-|nuORF	ENST00000357115.7_2_4:151935799-151936641:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.290771484375	2	535.287474	1068.5604	-0.20061	-0.00010739	0.62817	0.00033625	0.42755	0.00022886	535.2876683183888	70.245	0.8141	70.629	70.354	71.168	0.38416					37	19	3	0	0	0	0.14386	1	7809	7809		84.916	2.675	1	566530			27758	10381	18613	18623	31498	31498					0.028857429602794582
LHKLVHHLL	9	Unmodified	_LHKLVHHLL_					0	0	0			REV__ENSG00000160882|ENST00000292427|CYP11B1	REV__ENSG00000160882|ENST00000292427|CYP11B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3532104492188	2	555.350743	1108.68693	0.32258	0.00017915	4.121	0.0022886	4.4436	0.0024677	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.7932	1	10580	10580		20.482	2.1574	1	7708500	+		27759	20746	18614	18624	31499	31499					0.13693713976090294
LHKMGNSF	8	Unmodified	_LHKMGNSF_					0	0	0			REV__CON__P02070	REV__CON__P02070	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2345275878906	2	467.234187	932.453822	-0.26264	-0.00012271	-2.1411	-0.0010004	-2.4037	-0.0011231	467.23346633413524	64.606	2.155	65.159	64.517	66.672	0.55386					169	56	5	0	0	0	0.89457	1	7103	7103		37.028	2.8559	1	8508300	+	+	27760	15975	18615	18625	31500	31500					-0.015107108058714402
LHKPATDKN	9	Unmodified	_LHKPATDKN_					0	0	0		ENST00000432137.1_1_9:15527225-15527390:-|nuORF	ENST00000432137.1_1_9:15527225-15527390:-|nuORF	ENST00000432137.1_1_9:15527225-15527390:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2819213867188	2	512.282723	1022.55089	-1.5312	-0.00078441	-1.1667	-0.00059769	-2.6979	-0.0013821	512.2820384248688	86.195	3.9563	86.353	85.285	89.241	0.15851					164	92	2	0	0	0	0.76255	1	8478	8478		35.618	1.4457	1	356130			27761	11660	18616	18626	31501	31501					0.0405197467475773
LHKPQTVG	8	Unmodified	_LHKPQTVG_					0	0	0			REV__ENSG00000121716|ENST00000609309|PILRB	REV__ENSG00000121716|ENST00000609309|PILRB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2550354003906	2	440.255977	878.497401	-0.15815	-6.9625E-05	-1.2288	-0.00054097	-1.3869	-0.0006106	440.25528143106743	67.722	0.75465	67.743	67.424	68.179	0.021599					73	33	3	0	0	0	0.85277	1	6359	6359		25.45	0.94616	1	271080	+		27762	18463	18617	18627	31502	31502					0.05329221962904285
LHKQRKLISRR	11	Unmodified	_LHKQRKLISRR_					0	0	0			REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3110046386719	3	478.975788	1433.90553	-1.6788	-0.00080411	-1.7492	-0.00083784	-3.428	-0.0016419	479.3090926937771	44.658	1.9564	44.658	43.823	45.779	0					118	47	4	0	0	0	0.8398	1	3373	3373		6.6596	0.65857	1	394570	+		27763	29828	18618	18628	31503	31503					0.2059369854760007
LHKQRKLISRR	11	Unmodified	_LHKQRKLISRR_					0	0	0			REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.307373046875	3	478.975788	1433.90553	-1.444	-0.00069165	-1.1922	-0.00057106	-2.6363	-0.0012627	478.9751239612837	53.894	1.3907	53.916	52.877	54.267	0.022537					94	38	3	0	0	0	0.81021	1	4683	4683		9.2118	2.8909	1	147820	+		27764	29828	18618	18628	31504	31504					0.2059369854760007
LHKQRKLISRR	11	Unmodified	_LHKQRKLISRR_					0	0	0			REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9736633300781	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.547	1	45.559	45.059	46.059	0.012058								0	0	0	0.56276	1	3287	3287		9.6461	0	1		+		27765	29828	18618	18628	31505	31505					0.2059369854760007
LHKQRKLISRR	11	Unmodified	_LHKQRKLISRR_					0	0	0			REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9749450683594	3	478.975788	1433.90553	-0.085376	-4.0893E-05	-3.08	-0.0014753	-3.1654	-0.0015161	479.30837143687245	43.044	1.6592	42.994	42.147	43.806	-0.050308					106	44	4	0	0	0	0.81407	1	2981	2981		8.4073	2.0864	1	375540	+		27766	29828	18618	18628	31506	31506					0.2059369854760007
LHKQRKLISRR	11	Unmodified	_LHKQRKLISRR_					0	0	0			REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9752502441406	3	478.975788	1433.90553	-0.3619	-0.00017334	-1.9452	-0.00093169	-2.3071	-0.001105	478.9747142061381	50.735	1.3969	50.643	50.107	51.504	-0.091797					89	39	3	0	0	0	0.79224	1	4007	4007		12.957	2.8536	1	284170	+		27767	29828	18618	18628	31507	31507					0.2059369854760007
LHKQVRRY	8	Unmodified	_LHKQVRRY_					0	0	0		ENST00000565406.5_1_16:2089927-2094819:-|nuORF	ENST00000565406.5_1_16:2089927-2094819:-|nuORF	ENST00000565406.5_1_16:2089927-2094819:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.3259887695312	2	550.327799	1098.64105	1.2755	0.00070194	-2.4089	-0.0013257	-1.1334	-0.00062374	550.3264981095151	100.02	1.2719	100.07	99.504	100.78	0.047523					72	28	3	0	0	0	0.82464	1	10796	10796		21.702	4.3374	1	456100			27768	13912	18619	18629	31508	31508					0.0956706879385365
LHKRGIIYRDL	11	Unmodified	_LHKRGIIYRDL_					0	0	0		ENST00000284384.6_1_17:64637544-64770230:+|nuORF;ENSG00000154229|ENST00000413366|PRKCA	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.9483337402344	3	461.945494	1382.81465	2.7792	0.0012839	3.2357	0.0014947	6.015	0.0027786	461.94697066502204	112.87	7.7849	112.84	112.19	119.97	-0.024811					433	277	2	0	0	0	0.74771	1	12836	12836		22.562	4.0305	1	2186600			27769	5263	18620	18630	31509	31509					0.13855809779488482
LHKRGIIYRDL	11	Unmodified	_LHKRGIIYRDL_					0	0	0		ENST00000284384.6_1_17:64637544-64770230:+|nuORF;ENSG00000154229|ENST00000413366|PRKCA	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	461.945494	1382.81465	-1.7389	-0.00080326	7.7534	0.0035817	6.0146	0.0027784	461.9489824090098	112.48	0.4062	112.45	112.28	112.69	-0.032333	-0.19801	0.0060331	NaN	22.562	17	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185670			27770	5263	18620	18630							0.13855809779488482
LHKRVSAA	8	Unmodified	_LHKRVSAA_					0	0	0			REV__ENSG00000102794|ENST00000377462|ACOD1	REV__ENSG00000102794|ENST00000377462|ACOD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.2684631347656	2	441.269419	880.524284	0.74173	0.0003273	-0.78082	-0.00034455	-0.039081	-1.7245E-05	441.26903825897745	102.18	1.2206	102.31	101.8	103.02	0.13523					46	29	2	0	0	0	0.79929	1	10754	10754		18.324	0	1	670550	+		27771	17357	18621	18631	31510	31510					0.07924330574087435
LHKRVSAA	8	Unmodified	_LHKRVSAA_					0	0	0			REV__ENSG00000102794|ENST00000377462|ACOD1	REV__ENSG00000102794|ENST00000377462|ACOD1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	441.269419	880.524284	-0.97301	-0.00042936	1.0267	0.00045307	0.053738	2.3713E-05	441.26983682071625	102.14	1.3103	102.14	101.69	103	0	-0.15628	0.00077947	NaN	18.324	46	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	505400	+		27772	17357	18621	18631							0.07924330574087435
LHKRVSAA	8	Unmodified	_LHKRVSAA_					0	0	0			REV__ENSG00000102794|ENST00000377462|ACOD1	REV__ENSG00000102794|ENST00000377462|ACOD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	441.269419	880.524284	1.8872	0.00083277	-1.9356	-0.00085411	-0.048356	-2.1338E-05	441.2685436557191	102.23	1.1993	102.27	101.63	102.83	0.043198	-0.026721	-0.0018349	NaN	18.324	39	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	362500	+		27773	17357	18621	18631							0.07924330574087435
LHKRVSAA	8	Unmodified	_LHKRVSAA_					0	0	0			REV__ENSG00000102794|ENST00000377462|ACOD1	REV__ENSG00000102794|ENST00000377462|ACOD1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	441.269419	880.524284	-1.4055	-0.00062019	1.6116	0.00071114	0.2061	9.0946E-05	441.2699746440924	102.08	1.2621	102.27	101.76	103.02	0.19484	-0.025754	0.0012956	NaN	18.324	69	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	596870	+		27774	17357	18621	18631							0.07924330574087435
LHKRVSAA	8	Unmodified	_LHKRVSAA_					0	0	0			REV__ENSG00000102794|ENST00000377462|ACOD1	REV__ENSG00000102794|ENST00000377462|ACOD1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	441.269419	880.524284	0.74173	0.0003273	-0.78082	-0.00034455	-0.039081	-1.7245E-05	441.26903825897745	102.18	1.2206	102.31	101.8	103.02	0.13523	0.017627	-0.00081578	NaN	18.324	46	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	670550	+		27775	17357	18621	18631							0.07924330574087435
LHKRVVLASAS	11	Unmodified	_LHKRVVLASAS_					0	0	0		nc|ENSG00000292339|O95671-2|ASMTL;ENSG00000169093|ENST00000381317|ASMTL;ENST00000474865.6_1_X:1561033-1571742:-|nuORF	nc|ENSG00000292339|O95671-2|ASMTL	nc|ENSG00000292339|O95671-2|ASMTL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8670043945312	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.6921	1	11518	11518		32.812	6.1195	1	52150000			27776	6469	18622	18632	31511	31511					0.12612473933995716
LHKVNLDYN	9	Unmodified	_LHKVNLDYN_					0	0	0			REV__ENST00000261435.10_2_4:40098858-40098924:+|nuORF	REV__ENST00000261435.10_2_4:40098858-40098924:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.2955932617188	2	558.29583	1114.57711	0.33482	0.00018693	-0.94508	-0.00052763	-0.61025	-0.0003407	558.2952047618751	42.576	0.59734	42.641	42.438	43.035	0.065033					28	16	3	0	0	0	0.78536	1	2896	2896		29.15	0	1	213560	+		27777	24390	18623	18633	31512	31512					0.024402438462402642
LHKVRAAS	8	Unmodified	_LHKVRAAS_					0	0	0		ENST00000528031.1_1_11:75167699-75188792:-|nuORF	ENST00000528031.1_1_11:75167699-75188792:-|nuORF	ENST00000528031.1_1_11:75167699-75188792:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7738037109375	2	441.269419	880.524284	-0.15664	-6.9123E-05	0.0014655	6.4667E-07	-0.15518	-6.8476E-05	441.2695813648426	64.28	1.2244	64.279	63.834	65.058	-0.00078583					61	37	3	0	0	0	0.84341	1	6000	6000		24.203	3.7209	1	67454			27778	13296	18624	18634	31513	31513					0.07924330574087435
LHKVRAAS	8	Unmodified	_LHKVRAAS_					0	0	0		ENST00000528031.1_1_11:75167699-75188792:-|nuORF	ENST00000528031.1_1_11:75167699-75188792:-|nuORF	ENST00000528031.1_1_11:75167699-75188792:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	441.269419	880.524284	-1.5251	-0.00067299	-0.10089	-4.452E-05	-1.626	-0.00071751	441.2702032900359	64.501	0.27224	64.501	64.408	64.68	0	0.024153	0.00061566	NaN	24.203	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28267			27779	13296	18624	18634							0.07924330574087435
LHKVRAAS	8	Unmodified	_LHKVRAAS_					0	0	0		ENST00000528031.1_1_11:75167699-75188792:-|nuORF	ENST00000528031.1_1_11:75167699-75188792:-|nuORF	ENST00000528031.1_1_11:75167699-75188792:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	441.269419	880.524284	0.41543	0.00018331	-5.3969	-0.0023815	-4.9815	-0.0021982	441.26523193244947	64.526	0.30569	64.65	64.438	64.744	0.12397	0.17313	-0.0040583	NaN	24.203	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41305			27780	13296	18624	18634							0.07924330574087435
LHLAQWAI	8	Unmodified	_LHLAQWAI_					0	0	0			REV__nc|ENSG00000089682|Q96IZ5-2|RBM41	REV__nc|ENSG00000089682|Q96IZ5-2|RBM41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.77447509765625	2	476.27417	950.533787	-0.6425	-0.00030601	-3.9602	-0.0018862	-4.6028	-0.0021922	476.2720666146959	25.789	0.72847	25.757	25.498	26.226	-0.032125					26	20	2	0	0	0	0.89457	1	1072	1072		37.028	2.8559	1	25781	+		27781	16973	18625	18635	31514	31514					0.05654098859599799
LHLEKPIVSA	10	Unmodified	_LHLEKPIVSA_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|13|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|13|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|13|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8301391601562	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.86471	1	8893	8893		30.318	4.7437	1	1489800			27782	14614	18626	18636	31515	31515					0.10094577919812764
LHLFACSPSY	10	Unmodified	_LHLFACSPSY_					0	0	0			REV__ENSG00000165046|ENST00000379957|LETM2	REV__ENSG00000165046|ENST00000379957|LETM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.7772827148438	2	569.273509	1136.53247	0.4898	0.00027883	1.8208	0.0010365	2.3106	0.0013154	569.2744694870318	58.537	1.2979	58.647	58.343	59.641	0.11027					132	48	4	0	0	0	0.71042	1	5036	5036		44.117	1.7207	1	2907600	+		27783	21142	18627	18637	31516	31516					-0.03033903291475326
LHLGRGVLL	9	Unmodified	_LHLGRGVLL_					0	0	0		ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.3138427734375	2	489.316369	976.618185	-1.0416	-0.00050969	-3.7416	-0.0018308	-4.7832	-0.0023405	489.31444436731414	95.161	1.948	95.208	94.748	96.696	0.046989					116	45	4	0	0	0	0.7932	1	10076	10076		20.482	4.8456	1	1311400			27784	6860	18628	18638	31517	31517					0.12894049676390296
LHLIHITVNT	10	Unmodified	_LHLIHITVNT_					0	0	0		nc|ENSG00000133958|Q9P2D8-2|UNC79;chr14:93540831-93542466|19|12.21|0.74|4.05|+|ENST00000621021|UNC79,UNC79;chr14:93532578-93537989|19|12.0|0.65|4.2|+|ENST00000621021|UNC79,UNC79;chr14:93529326-93532550|21|10.48|0.57|4.21|+|ENST00000621021|UNC79,UNC79;chr14:93524042-93528558|19|11.84|0.52|4.51|+|ENST00000621021|UNC79,UNC79;chr14:93477728-93487663|23|11.22|0.59|4.24|+|ENST00000621021|UNC79,UNC79;chr14:93474393-93477558|17|15.47|0.73|4.4|+|ENST00000555664|UNC79,UNC79;nc|ENSG00000133958|Q9P2D8|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;ENSG00000133958|ENST00000695012|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.8395385742188	2	580.842948	1159.67134	-0.88113	-0.0005118	-3.3252	-0.0019314	-4.2063	-0.0024432	580.8408357600173	69.895	0.91608	69.925	69.626	70.542	0.030502					112	46	3	0	0	0	0.85694	1	6622	6622		21.96	1.013	1	15247000			27785	180	18629	18639	31518	31518					0.09789382668373037
LHLILAVALL	10	Unmodified	_LHLILAVALL_					0	0	0		ENSG00000234776|ENST00000449465|FREY1	ENSG00000234776|ENST00000449465|FREY1	ENSG00000234776|ENST00000449465|FREY1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3264770507812	2	538.365527	1074.7165	0.069526	3.7431E-05	-4.2338	-0.0022793	-4.1643	-0.0022419	538.3633867343314	100.89	0.3601	101.1	101	101.36	0.2058					14	8	2	0	0	0	0.37624	1	10591	10591		12.959	0	1	340250			27786	8746	18630	18640	31519	31519					0.18213233201549883
LHLILTSLRR	10	Unmodified	_LHLILTSLRR_					0	0	0			REV__ENSG00000198046|ENST00000504904|ZNF667	REV__ENSG00000198046|ENST00000504904|ZNF667	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3551635742188	2	611.393139	1220.77173	2.4268	0.0014837	3.1758	0.0019417	5.6026	0.0034254	611.3947835990659	96.292	0.25876	96.236	96.154	96.413	-0.056381					6	5	2	0	0	0	0.37624	1	10312	10312		9.1829	0	1	68812	+		27787	23292	18631	18641	31520	31520					0.1701703972200903
LHLKPRKV	8	Unmodified	_LHLKPRKV_					0	0	0			REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|136|3|sense	REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|136|3|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.23583984375	2	495.832186	989.649819	0.31749	0.00015742	3.8881	0.0019279	4.2056	0.0020853	495.83402829653755	41.578	0.92164	41.547	41.029	41.95	-0.030991					38	23	2	0	0	0	0.4196	1	3010	3010		19.36	11.129	1	87216	+		27788	29594	18632	18642	31521	31521					0.15458042430316254
LHLLAPRSN	9	Unmodified	_LHLLAPRSN_					0	0	0			REV__nc|ENSG00000064651|P55011-3|SLC12A2	REV__nc|ENSG00000064651|P55011-3|SLC12A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.81329345703125	2	510.801083	1019.58761	-0.053864	-2.7514E-05	-1.8598	-0.00095	-1.9137	-0.00097751	510.8008814643762	80.773	0.28882	81.195	81.06	81.349	0.4215					9	6	2	0	0	0	0.20789	1	9292	9292		19.997	0	1	55332	+		27789	16480	18633	18643	31522	31522					0.07860271291326626
LHLLEMQRRVK	11	Unmodified	_LHLLEMQRRVK_					0	0	0			REV__ENST00000476142.1_1_3:56651192-56651654:+|nuORF	REV__ENST00000476142.1_1_3:56651192-56651654:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.22308349609375	3	474.950251	1421.82892	-0.053165	-2.5251E-05	2.9027	0.0013786	2.8496	0.0013534	474.951438871876	27.194	0.6196	27.018	26.748	27.367	-0.17559					37	13	4	0	0	0	0.17729	1	1514	1514		8.7993	0	1	294510	+		27790	22394	18634	18644	31523	31523					0.13488138936054384
LHLLLTFPKGE	11	Unmodified	_LHLLLTFPKGE_					0	0	0		nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3772583007812	2	634.374081	1266.73361	1.3188	0.00083664	3.8961	0.0024716	5.215	0.0033083	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.72918	2	12969	12969;13070		26.693	4.1133	1	12917000			27791	7298	18635	18645	31524;31525	31524					0.11091109016706469
LHLLYISF	8	Unmodified	_LHLLYISF_					0	0	0			REV__ENSG00000182170|ENST00000332314|MRGPRG	REV__ENSG00000182170|ENST00000332314|MRGPRG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.27392578125	2	503.292028	1004.5695	-0.27803	-0.00013993	4.0319	0.0020292	3.7538	0.0018893	503.29430943469913	85.97	0.60934	86.414	86.283	86.892	0.44331					20	14	2	0	0	0	0.4196	1	10040	10040		23.037	0	1	169670	+		27792	22505	18636	18646	31526	31526					0.0674013631660273
LHLNLLLRK	9	Unmodified	_LHLNLLLRK_					0	0	0			REV__nc|ENSG00000060749|Q2KHR3-2|QSER1	REV__nc|ENSG00000060749|Q2KHR3-2|QSER1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3402709960938	2	560.371675	1118.7288	3.1449	0.0017623	2.2723	0.0012733	5.4172	0.0030356	560.3730992903044	102.85	0.16873	102.81	102.66	102.83	-0.047005					6	3	2	0	0	0	0.20789	1	11247	11247		18.324	0	1	60510	+		27793	16452	18637	18647	31527	31527					0.17418269664608488
LHLPAYKS	8	Unmodified	_LHLPAYKS_					0	0	0			REV__ENSG00000273749|ENST00000617928|CYFIP1	REV__ENSG00000273749|ENST00000617928|CYFIP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7375793457031	2	464.766178	927.517802	-0.19726	-9.1679E-05	0.42619	0.00019808	0.22893	0.0001064	464.7661449015259	53.497	0.66096	53.911	53.54	54.201	0.4139					34	15	3	0	0	0	0.4196	1	5387	5387		35.201	8.4046	1	449560	+		27794	23992	18638	18648	31528	31528					0.051143926227155134
LHLPIYRA	8	Unmodified	_LHLPIYRA_					0	0	0			REV__ENST00000530903.1_1_11:126073315-126075741:-|nuORF	REV__ENST00000530903.1_1_11:126073315-126075741:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.18450927734375	2	491.795269	981.575986	0.55492	0.0002729	-0.2709	-0.00013323	0.28402	0.00013968	491.79538935018167	74.155	0.21397	74.287	74.207	74.421	0.13126					11	8	2	0	0	0	0.4196	1	6853	6853		8.2313	0	1	36084	+		27795	21193	18639	18649	31529	31529					0.08446074267988024
LHLPPPGEEPE	11	Unmodified	_LHLPPPGEEPE_					0	0	0			REV__nc|ENSG00000183145|P57055-2|RIPPLY3	REV__nc|ENSG00000183145|P57055-2|RIPPLY3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.2670288085938	2	607.806228	1213.5979	0.58305	0.00035438	3.6436	0.0022146	4.2266	0.002569	607.8081994234861	56.144	1.1286	56.704	56.189	57.318	0.55954					40	27	2	0	0	0	0.62914	1	5800	5800		31.53	0	1	418530	+		27796	22582	18640	18650	31530	31530					-0.0003521056476074591
LHLPRKSLR	9	Unmodified	_LHLPRKSLR_					0	0	0			REV__ENST00000476532.1_1_X:128913960-128914035:+|nuORF	REV__ENST00000476532.1_1_X:128913960-128914035:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.34033203125	2	560.359099	1118.70365	0.39628	0.00022206	-2.2969	-0.0012871	-1.9007	-0.001065	560.3571305865726	101.95	0.54834	102.14	101.97	102.52	0.19483					21	13	3	0	0	0	0.20789	1	10722	10722		21.96	6.3181	1	828030	+		27797	27336	18641	18651	31531	31531					0.1490421486203104
LHLPRKSLR	9	Unmodified	_LHLPRKSLR_					0	0	0			REV__ENST00000476532.1_1_X:128913960-128914035:+|nuORF	REV__ENST00000476532.1_1_X:128913960-128914035:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402099609375	2	560.359099	1118.70365	-1.4184	-0.00079483	-2.6973	-0.0015114	-4.1157	-0.0023063	560.3575089821776	102.17	0.45124	102.31	101.89	102.34	0.13569					21	10	3	0	0	0	0.20789	1	10675	10675		21.96	7.2958	1	621060	+		27798	27336	18641	18651	31532	31532					0.1490421486203104
LHLQDLEP	8	Unmodified	_LHLQDLEP_					0	0	0		ENSG00000103742|ENST00000352385|IGDCC4;ENST00000559327.1_1_15:65676349-65688574:-|nuORF;nc|ENSG00000103742|Q8TDY8-2|IGDCC4;ENST00000558048.5_1_15:65676349-65677832:-|nuORF	ENSG00000103742|ENST00000352385|IGDCC4	ENSG00000103742|ENST00000352385|IGDCC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.7575988769531	2	482.758549	963.502546	-0.50677	-0.00024465	0.55772	0.00026924	0.050947	2.4595E-05	482.7586455714294	46.753	0.66854	47.224	46.938	47.607	0.47139					26	15	2	0	0	0	0.73851	1	4429	4429		65.803	5.5092	1	2539500			27799	2100	18642	18652	31533	31533					0.019334810348595965
LHLRDPIP	8	Unmodified	_LHLRDPIP_					0	0	0		ENST00000412217.1_1_2:61021255-61021291:+|nuORF	ENST00000412217.1_1_2:61021255-61021291:+|nuORF	ENST00000412217.1_1_2:61021255-61021291:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.8013610839844	2	480.784902	959.55525	-0.095358	-4.5847E-05	-1.116	-0.00053656	-1.2114	-0.0005824	480.7842576364472	95.3	0.33207	95.368	95.098	95.43	0.068344					10	7	2	0	0	0	0.4196	1	9942	9942		18.324	0	1	83800			27800	11336	18643	18653	31534	31534					0.07385483888310773
LHLRGGERLN	10	Unmodified	_LHLRGGERLN_					0	0	0			REV__ENST00000541760.1_1_11:73360074-73362936:+|nuORF	REV__ENST00000541760.1_1_11:73360074-73362936:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.8318481445312	2	582.833446	1163.65234	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.396	1	94.832	94.332	95.332	0.43539								0	0	0	0.45132	1	11308	11308		30.318	7.7381	1		+		27801	16239	18644	18654	31535	31535					0.07705846097337599
LHLSSDALRKK	11	Unmodified	_LHLSSDALRKK_					0	0	0			REV__ENSG00000161021|ENST00000292599|MAML1	REV__ENSG00000161021|ENST00000292599|MAML1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3772583007812	2	634.377686	1266.74082	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.89	1	118.81	118.31	119.31	-0.07531								0	0	0	0.56276	1	12755	12755		19.997	0	1		+		27802	20758	18645	18655	31536	31536					0.11811841617122809
LHLSTPLSSY	10	Unmodified	_LHLSTPLSSY_					0	0	0			REV__ENST00000515406.2_1_5:149379587-149379674:-|nuORF	REV__ENST00000515406.2_1_5:149379587-149379674:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.30078125	2	559.298039	1116.58152	-0.12755	-7.1337E-05	3.7447	0.0020944	3.6172	0.0020231	559.2999136366896	93.749	1.0491	94.184	93.594	94.643	0.43539					60	26	3	0	0	0	0.46422	1	11189	11189		58.782	2.0609	1	1432900	+		27803	28031	18646	18656	31537	31537					0.027897082691424657
LHLTLLLVHWV	11	Unmodified	_LHLTLLLVHWV_					0	0	0		ENST00000460780.5_1_1:201330340-201331096:-|nuORF	ENST00000460780.5_1_1:201330340-201331096:-|nuORF	ENST00000460780.5_1_1:201330340-201331096:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.9435729980469	3	448.611452	1342.81253	-1.309	-0.00058724	-3.2579	-0.0014615	-4.5669	-0.0020488	448.60976401690687	76.777	1.1377	76.902	76.414	77.552	0.12485					110	49	3	0	0	0	0.76251	1	7227	7227		19.263	0.73163	1	879130			27804	12012	18647	18657	31538	31538					0.15483381041622124
LHLVAAAGP	9	Unmodified	_LHLVAAAGP_					0	0	0		ENST00000427566.2_1_1:248100136-248100640:-|nuORF	ENST00000427566.2_1_1:248100136-248100640:-|nuORF	ENST00000427566.2_1_1:248100136-248100640:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.75250244140625	2	424.75307	847.491587	0.68659	0.00029163	-1.8987	-0.00080646	-1.2121	-0.00051483	424.75214856371434	66.819	1.0126	67.204	66.547	67.559	0.38515					56	29	3	0	0	0	0.7932	1	7271	7271		21.702	0	1	372660			27805	11578	18648	18658	31539	31539					0.06174123451228297
LHLVSFLSLLH	11	Unmodified	_LHLVSFLSLLH_					0	0	0		ENST00000469480.1_1_11:62344316-62344720:-|nuORF	ENST00000469480.1_1_11:62344316-62344720:-|nuORF	ENST00000469480.1_1_11:62344316-62344720:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.30322265625	3	426.923807	1277.74959	-0.692	-0.00029543	1.0244	0.00043733	0.33238	0.0001419	426.92393537956895	60.318	0.62621	60.707	60.412	61.038	0.38948					29	17	2	0	0	0	0.17294	1	6357	6357		25.126	16.719	1	463860			27806	12200	18649	18659	31540	31540					0.12182815253618173
LHLVSFLSLLH	11	Unmodified	_LHLVSFLSLLH_					0	0	0		ENST00000469480.1_1_11:62344316-62344720:-|nuORF	ENST00000469480.1_1_11:62344316-62344720:-|nuORF	ENST00000469480.1_1_11:62344316-62344720:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.30267333984375	3	426.923807	1277.74959	-0.34631	-0.00014785	0.34405	0.00014688	-0.0022567	-9.6344E-07	427.2585874876313	60.21	0.67721	60.764	60.463	61.14	0.55323					28	18	2	0	0	0	0.17375	1	6450	6450		24.232	8.3112	1	480560			27807	12200	18649	18659	31541	31541					0.12182815253618173
LHLYKRWFRRD	11	Unmodified	_LHLYKRWFRRD_					0	0	0			REV__ENSG00000160957|ENST00000617875|RECQL4	REV__ENSG00000160957|ENST00000617875|RECQL4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.6338500976562	3	530.631909	1588.8739	-0.15942	-8.4591E-05	3.0075	0.0015959	2.8481	0.0015113	530.633588179504	38.167	0.5439	38.183	37.956	38.5	0.016563					32	15	3	0	0	0	0.84494	1	2248	2248		6.3209	0.90796	1	155150	+		27808	20752	18650	18660	31542	31542					0.10301705793608562
LHMEIGQRS	9	Oxidation (M)	_LHM(Oxidation (M))EIGQRS_		LHM(1)EIGQRS		LHM(42)EIGQRS	0	0	1			REV__ENSG00000168807|ENST00000336278|SNTB2	REV__ENSG00000168807|ENST00000336278|SNTB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.7720336914062	2	543.771665	1085.52878	0.92776	0.00050449	-3.2659	-0.0017759	-2.3381	-0.0012714	543.7698352004945	22.722	0.43309	22.672	22.403	22.836	-0.050077					24	17	2	0	0	0	0.67345	1	708	708		42.396	10.866	1	39420	+		27809	21521	18651	18661	31543	31543		321			-0.010565730653070204
LHMKFKKLD	9	Unmodified	_LHMKFKKLD_					0	0	0			REV__nc|ENSG00000162711|Q96P20-3|NLRP3	REV__nc|ENSG00000162711|Q96P20-3|NLRP3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.3397216796875	2	580.336444	1158.65834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.393	1	20.323	19.823	20.823	-0.069735								0	0	0	0.3307	1	528	528		19.997	1.6724	1		+		27810	20838	18652	18662	31544	31544					0.08535228284631557
LHNEGFFSA	9	Unmodified	_LHNEGFFSA_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.23834228515625	2	511.240524	1020.46649	-0.41668	-0.00021302	-3.0037	-0.0015356	-3.4204	-0.0017486	511.2388007435022	51.114	1.0082	51.122	50.757	51.765	0.0077477					45	29	2	0	0	0	0.74721	1	4405	4405		37.159	1.5408	1	118550	+		27811	21931	18653	18663	31545	31545					-0.04291976141996656
LHNEGFFSA	9	Unmodified	_LHNEGFFSA_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	511.240524	1020.46649	0.36666	0.00018745	-4.0762	-0.0020839	-3.7095	-0.0018965	511.23832380229123	51.211	0.7374	51.261	50.944	51.681	0.049896	0.10807	-0.00074752	NaN	37.159	26	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96433	+		27812	21931	18653	18663							-0.04291976141996656
LHPARRRS	8	Unmodified	_LHPARRRS_					0	0	0			REV__ENST00000535924.6_1_1:85786358-85786505:-|nuORF	REV__ENST00000535924.6_1_1:85786358-85786505:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	496.8352355957031	2	496.796666	991.57878	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.262	1	37.361	36.861	37.861	0.099277								0	0	0	0.30004	1	2124	2124		21.702	0.7554	1		+		27813	28398	18654	18664	31546	31546					0.0826534244550885
LHPLGPCCGP	10	Unmodified	_LHPLGPCCGP_					0	0	0			REV__ENSG00000181409|ENST00000326724|AATK	REV__ENSG00000181409|ENST00000326724|AATK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.2367858886719	2	497.235873	992.457192	0.42922	0.00021343	-1.2912	-0.00064204	-0.862	-0.00042862	497.23507445216626	30.28	0.66148	30.278	29.988	30.649	-0.0022526					49	31	2	0	0	0	0.85976	1	1314	1314		35.201	3.6709	1	201630	+		27814	22458	18655	18665	31547	31547					-0.03933784023536191
LHPLLPDPSA	10	Unmodified	_LHPLLPDPSA_					0	0	0		nc|ENSG00000090534|P40225-3|THPO;nc|ENSG00000090534|P40225-2|THPO;ENSG00000090534|ENST00000647395|THPO	nc|ENSG00000090534|P40225-3|THPO	nc|ENSG00000090534|P40225-3|THPO	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.293212890625	2	530.295299	1058.57605	-0.73575	-0.00039016	-2.8196	-0.0014952	-3.5553	-0.0018854	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.85934	2	8822	8822;8919		35.618	6.4687	1	1390700			27815	1648	18656	18666	31548;31549	31548					0.049100294773325004
LHPLLVKARPL	11	Unmodified	_LHPLLVKARPL_					0	0	0			REV__ENST00000323927.2_1_9:140077681-140079444:-|nuORF	REV__ENST00000323927.2_1_9:140077681-140079444:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	628.91455078125	2	628.913707	1255.81286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.505	1	52.546	52.046	53.046	0.040592								0	0	0	0.56276	1	4240	4240		19.997	0.89325	1		+		27816	25037	18657	18667	31550	31550					0.19518800761511557
LHPNKGLTLMH	11	Unmodified	_LHPNKGLTLMH_					0	0	0			REV__nc|ENSG00000140465|P04798-2|CYP1A1	REV__nc|ENSG00000140465|P04798-2|CYP1A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	630.8495483398438	2	630.847707	1259.68086	-0.029329	-1.8502E-05	3.3344	0.0021035	3.3051	0.002085	630.849677894081	111.25	1.2557	111.25	110.42	111.68	0					88	39	3	0	0	0	0.72228	1	11574	11574		27.882	4.3595	1	207570	+		27817	19620	18658	18668	31551	31551					0.06140827682247618
LHPQVATI	8	Unmodified	_LHPQVATI_					0	0	0		nc|ENSG00000163349|Q86Z02-4|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;ENSG00000163349|ENST00000426820|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	439.7650451660156	2	439.758352	877.502152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.117	1	62.237	61.737	62.737	0.1209								0	0	0	0.29498	1	5414	5414		26.796	0	1				27818	5785	18659	18669	31552	31552					0.05850106105674513
LHPTRFIL	8	Unmodified	_LHPTRFIL_					0	0	0			REV__ENST00000428599.6_1_11:57529333-57558863:+|nuORF	REV__ENST00000428599.6_1_11:57529333-57558863:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.8074951171875	2	498.803094	995.591636	0.36192	0.00018053	0.83184	0.00041492	1.1938	0.00059545	498.8033596820182	51.857	1.6149	51.917	51.457	53.072	0.059719					144	50	4	0	0	0	0.81548	1	4107	4107		20.482	1.1219	1	2712200	+		27819	25441	18660	18670	31553	31553					0.09366360785031702
LHQFGSESI	9	Unmodified	_LHQFGSESI_					0	0	0			REV__ENSG00000186105|ENST00000334994|LRRC70	REV__ENSG00000186105|ENST00000334994|LRRC70	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.25323486328125	2	509.253631	1016.49271	-0.84137	-0.00042847	-1.812	-0.00092274	-2.6533	-0.0013512	509.252557341345	43.362	0.84482	43.795	43.46	44.305	0.4334					45	20	4	0	0	0	0.062302	1	3903	3903		102.77	4.144	1	3334400	+		27820	22823	18661	18671	31554	31554					-0.014877069704994028
LHQFGSESI	9	Unmodified	_LHQFGSESI_					0	0	0			REV__ENSG00000186105|ENST00000334994|LRRC70	REV__ENSG00000186105|ENST00000334994|LRRC70	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.251708984375	2	509.253631	1016.49271	-1.1684	-0.00059499	-0.95744	-0.00048758	-2.1258	-0.0010826	509.2530182556899	43.128	0.75933	43.902	43.624	44.384	0.77379					40	18	3	0	0	0	0.084975	2	3896	3886;3896		96.19	8.4361	1	2905300	+		27821	22823	18661	18671	31555;31556	31556					-0.014877069704994028
LHQMWLSW	8	Unmodified	_LHQMWLSW_					0	0	0		nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;ENSG00000105355|ENST00000221957|PLIN3	nc|ENSG00000105355|O60664-2|PLIN3	nc|ENSG00000105355|O60664-2|PLIN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.7719116210938	2	550.770937	1099.52732	-0.19023	-0.00010477	2.0402	0.0011237	1.85	0.0010189	550.7718672682902	66.199	1.1831	66.226	65.995	67.179	0.027321					126	60	4	0	0	0	0.52826	1	6248	6248		74.517	13.545	1	1485600			27822	2206	18662	18672	31557	31557					-0.018461623634038915
LHQSQKQF	8	Unmodified	_LHQSQKQF_					0	0	0		ENSG00000066422|ENST00000312938|ZBTB11	ENSG00000066422|ENST00000312938|ZBTB11	ENSG00000066422|ENST00000312938|ZBTB11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8076171875	2	508.269616	1014.52468	-0.33204	-0.00016876	-2.3074	-0.0011728	-2.6394	-0.0013415	508.26834575697313	82.384	0.69425	82.81	82.43	83.124	0.42646					21	16	2	0	0	0	0.4196	1	9567	9567		31.955	11.473	1	158280			27823	1159	18663	18673	31558	31558					0.01799705503287896
LHQVQSRPTLW	11	Unmodified	_LHQVQSRPTLW_					0	0	0			REV__ENST00000310032.12_1_5:176084950-176085187:+|nuORF	REV__ENST00000310032.12_1_5:176084950-176085187:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.58868408203125	3	455.585966	1363.73607	1.3169	0.00059994	3.7582	0.0017122	5.075	0.0023121	455.58757567387903	23.924	0.4607	23.35	23.094	23.555	-0.57415					26	10	3	0	0	0	0.74405	1	1121	1121		23.378	3.0629	1	110070	+		27824	24880	18664	18674	31559	31559					0.06874957474383336
LHRAAIAFL	9	Unmodified	_LHRAAIAFL_					0	0	0		ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3045959472656	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.185	1	43.242	42.742	43.742	0.056744								0	0	0	0.35186	1	2960	2960		47.916	12.715	1				27825	1721;14802	18665	18675	31560	31560					0.09765763159327889
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.3681030273438	2	625.365444	1248.71634	-0.058318	-3.647E-05	1.5613	0.00097636	1.503	0.00093989	625.3661572785429	103.13	0.64318	103.13	102.83	103.47	0					52	15	4	0	0	0	0.28254	6	10545	10545;10556;10566;10578;10588;10603		75.043	20.321	1	15149000			27826	8401	18666	18676	31561;31562;31563;31564;31565;31566	31561					0.10192626254297465
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.3676147460938	2	625.365444	1248.71634	-0.058001	-3.6272E-05	1.3968	0.00087353	1.3388	0.00083725	625.3661061334321	103.68	0.52854	103.68	103.47	104	0					28	12	3	0	0	0	0.51007	1	10631	10631		51.193	8.7966	1	745010			27827	8401	18666	18676	31567	31567					0.10192626254297465
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	625.3667602539062	2	625.365444	1248.71634	-0.24164	-0.00015111	1.8845	0.0011785	1.6428	0.0010274	625.3661345505042	103.15	0.5662	103.16	102.88	103.44	0.0082016					38	13	4	0	0	0	0.37012	5	11082	11060;11071;11082;11093;11106		61.691	17.314	1	2982000			27828	8401	18666	18676	31568;31569;31570;31571;31572	31570					0.10192626254297465
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.3681030273438	2	625.365444	1248.71634	2.9236	0.0018283	-1.4013	-0.00087634	1.5223	0.000952	625.3642345245686	103.09	0.58058	103.04	102.74	103.32	-0.047005					37	13	4	0	0	0	0.33509	4	11262	11262;11271;11283;11297		65.465	17.181	1	3354100			27829	8401	18666	18676	31573;31574;31575;31576	31573					0.10192626254297465
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.3676147460938	2	625.365444	1248.71634	0.88461	0.0005532	0.36921	0.00023089	1.2538	0.00078409	625.3655601309232	102.93	0.5733	102.97	102.71	103.28	0.043198					33	13	3	0	0	0	0.43778	3	11133	11133;11156;11167		56.434	12.439	1	3200700			27830	8401	18666	18676	31577;31578;31579	31577					0.10192626254297465
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	625.3693237304688	2	625.365444	1248.71634	1.3576	0.00084901	-0.088769	-5.5513E-05	1.2689	0.0007935	625.3650849752331	102.87	0.55746	103.05	102.8	103.36	0.18297					34	13	3	0	0	0	0.43778	3	10838	10838;10850;10861		56.434	17.181	1	5658400			27831	8401	18666	18676	31580;31581;31582	31580					0.10192626254297465
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	625.3670654296875	2	625.365444	1248.71634	0.92517	0.00057857	0.49478	0.00030942	1.4199	0.00088798	625.365449326419	102.94	0.59602	103.07	102.81	103.4	0.12622					40	14	4	0	0	0	0.32318	3	10876	10864;10876;10890		69.628	31.816	1	6481300			27832	8401	18666	18676	31583;31584;31585	31584					0.10192626254297465
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	625.368896484375	2	625.365444	1248.71634	-1.2067	-0.00075462	2.3574	0.0014742	1.1507	0.00071959	625.366668445439	102.98	0.59128	103.09	102.79	103.39	0.11494					44	14	4	0	0	0	0.33509	5	10820	10784;10795;10807;10820;10831		65.465	23.069	1	5699200			27833	8401	18666	18676	31586;31587;31588;31589;31590	31589					0.10192626254297465
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	625.3672485351562	2	625.365444	1248.71634	1.9735	0.0012342	-0.5464	-0.0003417	1.4271	0.00089248	625.3647310394922	102.7	0.68327	102.92	102.74	103.42	0.22555					64	22	3	0	0	0	0.33509	7	12484	12474;12484;12493;12500;12511;12519;12530		65.465	21.088	1	16727000			27834	8401	18666	18676	31591;31592;31593;31594;31595;31596;31597	31592					0.10192626254297465
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	625.3681030273438	2	625.365444	1248.71634	2.002	0.001252	-0.60786	-0.00038014	1.3942	0.00087186	625.364760825802	103.43	0.61937	103.66	103.42	104.04	0.22556					43	14	4	0	0	0	0.43778	3	12554	12554;12563;12575		56.434	13.57	1	6468300			27835	8401	18666	18676	31598;31599;31600	31598					0.10192626254297465
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.3684692382812	2	625.365444	1248.71634	3.833	0.0023971	-2.6961	-0.001686	1.137	0.00071102	625.3634210575901	102.74	1.2377	103.04	102.73	103.96	0.29865					76	35	3	0	0	0	0.33509	7	12515	12515;12533;12541;12548;12560;12569;12583		65.465	21.088	1	12629000			27836	8401	18666	18676	31601;31602;31603;31604;31605;31606;31607	31601					0.10192626254297465
LHRGPRSSRAL	11	Unmodified	_LHRGPRSSRAL_					0	0	0		ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	ENSG00000203896|ENST00000309546|LIME1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.3684692382812	2	625.365444	1248.71634	4.0299	0.0025202	-2.8375	-0.0017745	1.1924	0.00074569	625.3635366275834	103.44	0.6306	103.71	103.46	104.09	0.26524					25	14	2	0	0	0	0.43778	2	12621	12609;12621		56.434	6.8155	1	5387700			27837	8401	18666	18676	31608;31609	31609					0.10192626254297465
LHRINRTQI	9	Unmodified	_LHRINRTQI_					0	0	0			REV__ENST00000551359.5_1_12:56713025-56726878:-|nuORF	REV__ENST00000551359.5_1_12:56713025-56726878:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8433227539062	2	575.843813	1149.67307	-0.49921	-0.00028747	-0.94267	-0.00054283	-1.4419	-0.0008303	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.76255	1	8733	8733		35.618	4.0885	1	1518700	+		27838	19227	18667	18677	31610	31610					0.10422436476983421
LHRKKLLTQE	10	Unmodified	_LHRKKLLTQE_					0	0	0			REV__L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|19|1|sense	REV__L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|19|1|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5928955078125	3	422.594461	1264.76155	-1.6666	-0.00070429	-1.2985	-0.00054872	-2.965	-0.001253	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.85086	1	4645	4645		19.263	0	1	771770	+		27839	29572	18668	18678	31611	31611					0.13976431996820793
LHRKPFPS	8	Unmodified	_LHRKPFPS_					0	0	0			REV__ENST00000449606.5_1_16:23534653-23534791:-|nuORF	REV__ENST00000449606.5_1_16:23534653-23534791:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.2854309082031	2	491.285069	980.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.808	1	52.808	52.308	53.308	0								0	0	0	0.30004	1	4352	4352		21.702	2.3424	1		+		27840	26855	18669	18679	31612	31612					0.06452903608192173
LHRNITVKT	9	Unmodified	_LHRNITVKT_					0	0	0		ENSG00000126231|ENST00000375547|PROZ;nc|ENSG00000126231|P22891-2|PROZ	ENSG00000126231|ENST00000375547|PROZ	ENSG00000126231|ENST00000375547|PROZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.3270874023438	2	541.327465	1080.64038	-0.011044	-5.9782E-06	-0.92006	-0.00049805	-0.9311	-0.00050403	541.3267904658042	16.141	0.16509	15.654	15.531	15.696	-0.48718					5	3	2	0	0	0	0.7932	1	94	94		25.574	2.0514	1	50597			27841	3447	18670	18680	31613	31613					0.10328229354126961
LHRNITVKT	9	Unmodified	_LHRNITVKT_					0	0	0		ENSG00000126231|ENST00000375547|PROZ;nc|ENSG00000126231|P22891-2|PROZ	ENSG00000126231|ENST00000375547|PROZ	ENSG00000126231|ENST00000375547|PROZ	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	541.327465	1080.64038	0.0064223	3.4766E-06	-0.32253	-0.00017459	-0.3161	-0.00017112	541.3273208609723	16.13	0.2261	15.531	15.375	15.601	-0.59873	-0.061047	0.00034128	NaN	25.574	8	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55404			27842	3447	18670	18680							0.10328229354126961
LHRQVPGG	8	Unmodified	_LHRQVPGG_					0	0	0		nc|ENSG00000167280|Q8NFI3-2|ENGASE;nc|ENSG00000167280|Q8NFI3-3|ENGASE;ENSG00000167280|ENST00000579016|ENGASE	nc|ENSG00000167280|Q8NFI3-2|ENGASE	nc|ENSG00000167280|Q8NFI3-2|ENGASE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.2469177246094	2	432.245944	862.477334	-1.5831	-0.0006843	4.1398	0.0017894	2.5567	0.0011051	432.2477437889501	97.848	1.4004	98.075	97.569	98.969	0.22788					76	31	5	0	0	0	0.87276	1	10146	10146		29.842	1.5873	1	626180			27843	6283	18671	18681	31614	31614					0.04059471022958405
LHRRQGAAPA	10	Unmodified	_LHRRQGAAPA_					0	0	0			REV__ENST00000176183.5_1_11:639911-640686:+|nuORF	REV__ENST00000176183.5_1_11:639911-640686:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.806640625	2	538.807231	1075.59991	0.058912	3.1742E-05	-1.0748	-0.0005791	-1.0159	-0.00054736	538.806607108325	90.57	3.5579	90.787	89.308	92.866	0.21737					211	84	4	0	0	0	0.86718	1	9032	9032		27.882	0	1	874780	+		27844	24084	18672	18682	31615	31615					0.06513307754380548
LHRTAQSA	8	Unmodified	_LHRTAQSA_					0	0	0			REV__ENSG00000135749|ENST00000258229|PCNX2	REV__ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.24029541015625	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.8621	1	8510	8510		26.693	0	1	1238700	+		27845	19245	18673	18683	31616	31616					0.021228632976999506
LHRWEPLASE	10	Unmodified	_LHRWEPLASE_					0	0	0			REV__ENST00000256646.6_1_1:120478138-120478180:-|nuORF	REV__ENST00000256646.6_1_1:120478138-120478180:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.3154296875	2	619.319837	1236.62512	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.83	1	59.831	59.331	60.331	0.00051117								0	0	0	0.45132	1	5154	5154		37.812	2.6595	1		+		27846	24329	18674	18684	31617	31617					0.016273177662469607
LHSARKGT	8	Unmodified	_LHSARKGT_					0	0	0		ENST00000527991.2_1_1:21620715-21620889:-|nuORF	ENST00000527991.2_1_1:21620715-21620889:-|nuORF	ENST00000527991.2_1_1:21620715-21620889:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.251708984375	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.85277	3	7434	7434;7463;8005		29.15	0.89528	1	2494100			27847	13295	18675	18685	31618;31619;31620	31618					0.04839453677391248
LHSARKGT	8	Unmodified	_LHSARKGT_					0	0	0		ENST00000527991.2_1_1:21620715-21620889:-|nuORF	ENST00000527991.2_1_1:21620715-21620889:-|nuORF	ENST00000527991.2_1_1:21620715-21620889:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.254150390625	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.84341	3	9401	9110;9243;9401		31.955	1.1603	1	2020200			27848	13295	18675	18685	31621;31622;31623	31623					0.04839453677391248
LHSARKGT	8	Unmodified	_LHSARKGT_					0	0	0		ENST00000527991.2_1_1:21620715-21620889:-|nuORF	ENST00000527991.2_1_1:21620715-21620889:-|nuORF	ENST00000527991.2_1_1:21620715-21620889:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.251708984375	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.89043	1	9311	9311		35.618	1.4457	1	2235800			27849	13295	18675	18685	31624	31624					0.04839453677391248
LHSIIISLVEA	11	Unmodified	_LHSIIISLVEA_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8568115234375	2	597.858264	1193.70197	-0.35529	-0.00021242	-2.6795	-0.001602	-3.0348	-0.0018144	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.63176	1	9051	9051		40.778	7.9657	1	1224100			27850	6458	18676	18686	31625	31625					0.11287116262769814
LHSKAVTVF	9	Unmodified	_LHSKAVTVF_					0	0	0		ENST00000560597.1_1_15:65748048-65748153:-|nuORF;ENST00000395652.7_1_15:65746746-65748153:-|nuORF	ENST00000560597.1_1_15:65748048-65748153:-|nuORF	ENST00000560597.1_1_15:65748048-65748153:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2898864746094	2	501.292559	1000.57057	-0.97974	-0.00049113	-3.1223	-0.0015652	-4.1021	-0.0020563	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.77696	1	7904	7904		31.53	2.3598	1	2111000			27851	11097	18677	18687	31626	31626					0.07030350685522535
LHSKAVTVF	9	Unmodified	_LHSKAVTVF_					0	0	0		ENST00000560597.1_1_15:65748048-65748153:-|nuORF;ENST00000395652.7_1_15:65746746-65748153:-|nuORF	ENST00000560597.1_1_15:65748048-65748153:-|nuORF	ENST00000560597.1_1_15:65748048-65748153:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2906494140625	2	501.292559	1000.57057	-0.063891	-3.2028E-05	-3.4647	-0.0017368	-3.5286	-0.0017689	501.2905870572702	99.607	2.095	99.648	98.964	101.06	0.041107					107	48	4	0	0	0	0.78536	1	10572	10572		29.15	0.89528	1	1073000			27852	11097	18677	18687	31627	31627					0.07030350685522535
LHSRVHRR	8	Unmodified	_LHSRVHRR_					0	0	0		ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2931518554688	2	530.81539	1059.61623	-0.06066	-3.22E-05	-1.4048	-0.0007457	-1.4655	-0.0007779	531.3137240598674	90.104	0.16905	90.317	90.211	90.38	0.21271					5	3	2	0	0	0	0.4196	1	9006	9006		25.45	0	1	30767			27853	1946	18678	18688	31628	31628					0.0888043371112417
LHSSIANLL	9	Unmodified	_LHSSIANLL_					0	0	0			REV__ENSG00000147894|ENST00000380003|C9orf72	REV__ENSG00000147894|ENST00000380003|C9orf72	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	484.23602294921875	2	484.282192	966.549831	-1.0572	-0.00051196	4.3892	0.0021256	3.3321	0.0016137	484.28268753244987	85.583	0.38647	85.583	85.271	85.658	0					10	8	2	0	0	0	0.20789	1	8089	8089		29.15	0	1	19082	+		27854	20090	18679	18689	31629	31629					0.06521760305861335
LHSVMALIG	9	Unmodified	_LHSVMALIG_					0	0	0			REV__ENSG00000047578|ENST00000261588|KATNIP	REV__ENSG00000047578|ENST00000261588|KATNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7688293457031	2	470.767863	939.521173	-0.48992	-0.00023064	2.2176	0.001044	1.7277	0.00081333	470.7688881667738	48.682	1.1232	49.586	49.29	50.413	0.90424					66	27	4	0	0	0	0.67235	1	4729	4729		42.474	8.3019	1	20692000	+		27855	16353	18680	18690	31630	31630					0.0489931940508086
LHTAYLAVY	9	Unmodified	_LHTAYLAVY_					0	0	0			REV__nc|ENSG00000138002|Q9UG01-2|IFT172	REV__nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3587646484375	2	525.784567	1049.55458	0.23935	0.00012585	-2.0787	-0.0010929	-1.8393	-0.00096709	525.7822641627857	35.566	0.22159	35.672	35.473	35.695	0.10603					10	6	2	0	0	0	0.20789	1	1894	1894		40.573	16.37	1	59001	+		27856	19428	18681	18691	31631	31631					0.03178644448621526
LHTEGRDIK	9	Unmodified	_LHTEGRDIK_					0	0	0			REV__ENST00000512380.1_1_4:186435855-186446271:-|nuORF	REV__ENST00000512380.1_1_4:186435855-186446271:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.7946166992188	2	534.793455	1067.57236	0.59521	0.00031832	2.9867	0.0015973	3.5819	0.0019156	534.7950640393225	57.999	0.80846	57.969	57.623	58.432	-0.029865					44	20	3	0	0	0	0.67345	1	5369	5369		42.396	3.59	1	254230	+		27857	20394	18682	18692	31632	31632					0.04127359703466027
LHTGKQLIL	9	Unmodified	_LHTGKQLIL_					0	0	0			REV__ENST00000357447.6_1_10:14372164-14372691:-|nuORF	REV__ENST00000357447.6_1_10:14372164-14372691:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.8232421875	2	511.821484	1021.62842	-1.4132	-0.00072333	-0.89982	-0.00046054	-2.3131	-0.0011839	511.8211778967949	83.262	0.81837	83.4	83.055	83.874	0.13811					27	17	2	0	0	0	0.71772	1	8011	8011		39.253	0.23134	1	68833	+		27858	25412	18683	18693	31633	31633					0.11846612610952434
LHTGKQLIL	9	Unmodified	_LHTGKQLIL_					0	0	0			REV__ENST00000357447.6_1_10:14372164-14372691:-|nuORF	REV__ENST00000357447.6_1_10:14372164-14372691:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	511.821484	1021.62842	0.65603	0.00033577	-2.4935	-0.0012762	-1.8374	-0.00094044	511.8202028824389	83.123	0.98573	83.27	82.715	83.7	0.14694	-0.058342	-0.00098517	NaN	39.253	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55212	+		27859	25412	18683	18693							0.11846612610952434
LHTGKQLIL	9	Unmodified	_LHTGKQLIL_					0	0	0			REV__ENST00000357447.6_1_10:14372164-14372691:-|nuORF	REV__ENST00000357447.6_1_10:14372164-14372691:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	511.821484	1021.62842	-1.4132	-0.00072333	-0.89982	-0.00046054	-2.3131	-0.0011839	511.8211778967949	83.262	0.81837	83.4	83.055	83.874	0.13811	0.071529	0.00064616	NaN	39.253	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68833	+		27860	25412	18683	18693							0.11846612610952434
LHTGLLFAAVR	11	Unmodified	_LHTGLLFAAVR_					0	0	0			REV__ENST00000493307.1_1_7:150020428-150023055:+|nuORF	REV__ENST00000493307.1_1_7:150020428-150023055:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3800048828125	2	599.358765	1196.70298	-1.2916	-0.00077413	0.11037	6.615E-05	-1.1812	-0.00070798	599.3582020479325	103.36	0.19011	103.48	103.31	103.5	0.11494					5	4	2	0	0	0	0.17318	1	10841	10841		25.574	4.6271	1	123040	+		27861	27691	18684	18694	31634	31634					0.11249375422312369
LHTQKEEQ	8	Unmodified	_LHTQKEEQ_					0	0	0		nc|ENSG00000179094|O15534-4|PER1;ENSG00000179094|ENST00000317276|PER1	nc|ENSG00000179094|O15534-4|PER1	nc|ENSG00000179094|O15534-4|PER1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7565612792969	2	506.756538	1011.49852	0.81643	0.00041373	-0.48484	-0.0002457	0.33159	0.00016803	506.75617183709835	22.755	0.54474	22.815	22.535	23.08	0.060431					31	19	2	0	0	0	0.91472	1	716	716		44.117	0	1	60266			27862	7242	18685	18695	31635	31635					-0.006766084588548438
LHTRLFGG	8	Unmodified	_LHTRLFGG_					0	0	0			REV__nc|ENSG00000187775|Q9UFH2-4|DNAH17	REV__nc|ENSG00000187775|Q9UFH2-4|DNAH17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7552490234375	2	450.756144	899.497735	-0.14135	-6.3713E-05	-4.1513	-0.0018712	-4.2927	-0.0019349	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.89457	1	7931	7931		37.028	10.336	1	337080	+		27863	29169	18686	18696	31636	31636					0.04396641682762947
LHTSVIVMKKL	11	Unmodified	_LHTSVIVMKKL_					0	0	0			REV__ENST00000415177.6_1_6:135318627-135323914:-|nuORF	REV__ENST00000415177.6_1_6:135318627-135323914:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	423.5975341796875	3	423.596814	1267.76861	-1.7147	-0.00072636	3.647	0.0015448	1.9322	0.00081848	423.5982725309242	105.5	3.0222	105.66	104.96	107.98	0.15925					250	75	5	0	0	0	0.72918	1	11194	11194		29.551	6.9892	1	8925200	+		27864	26416	18687	18697	31637	31637					0.1454402855299577
LHTVGALTQY	10	Unmodified	_LHTVGALTQY_					0	0	0			REV__ENSG00000170832|ENST00000300896|USP32	REV__ENSG00000170832|ENST00000300896|USP32	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.4050903320312	2	551.798206	1101.58186	1.0468	0.00057763	-1.4801	-0.00081674	-0.43333	-0.00023911	552.2966912949734	99.457	1.2273	99.79	99.494	100.72	0.33294					43	30	2	0	0	0	0.37624	1	12056	12056		39.253	7.723	1	315010	+		27865	21690	18688	18698	31638	31638					0.03513127989003806
LHTVGALTQY	10	Unmodified	_LHTVGALTQY_					0	0	0			REV__ENSG00000170832|ENST00000300896|USP32	REV__ENSG00000170832|ENST00000300896|USP32	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	551.798206	1101.58186	1.7513	0.00096636	0.68944	0.00038043	2.4407	0.0013468	551.7991521840671	99.41	0.64632	99.773	99.637	100.28	0.36292	-0.0084596	0.00080109	NaN	39.253	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	331270	+		27866	21690	18688	18698							0.03513127989003806
LHVALVTL	8	Unmodified	_LHVALVTL_					0	0	0		nc|ENSG00000090539|Q9H2X0-4|CHRD;ENST00000470150.5_1_3:184098136-184100834:+|nuORF;nc|ENSG00000090539|Q9H2X0-5|CHRD;ENSG00000090539|ENST00000204604|CHRD;ENST00000460627.5_1_3:184100167-184100350:+|nuORF	nc|ENSG00000090539|Q9H2X0-4|CHRD	nc|ENSG00000090539|Q9H2X0-4|CHRD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.25506591796875	2	433.278921	864.543289	-1.8301	-0.00079293	0.49797	0.00021576	-1.3321	-0.00057717	433.28008146372906	107.19	0.81475	107.23	106.89	107.71	0.036118					32	19	3	0	0	0	0.4196	1	11403	11403		12.959	4.7279	1	265840			27867	1649	18689	18699	31639	31639					0.10559867145138924
LHVKPAFKS	9	Unmodified	_LHVKPAFKS_					0	0	0		ENSG00000187959|ENST00000344935|CPSF4L	ENSG00000187959|ENST00000344935|CPSF4L	ENSG00000187959|ENST00000344935|CPSF4L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8080444335938	2	513.808377	1025.6022	-0.30203	-0.00015519	1.5478	0.00079525	1.2457	0.00064007	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.76764	1	4176	4176		34.173	0.65696	1	861580			27868	7895	18690	18700	31640	31640					0.09042343439477918
LHVLVVREVK	10	Unmodified	_LHVLVVREVK_					0	0	0			REV__ENST00000588643.1_1_17:74036870-74037056:-|nuORF	REV__ENST00000588643.1_1_17:74036870-74037056:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.4678344726562	2	596.38224	1190.74993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.222	1	24.236	23.736	24.736	0.013996								0	0	0	0.45132	1	811	811		14.865	0	1		+		27869	29143	18691	18701	31641	31641					0.1621823497346213
LHVPIAPPSA	10	Unmodified	_LHVPIAPPSA_					0	0	0			REV__ENSG00000124788|ENST00000436367|ATXN1	REV__ENSG00000124788|ENST00000436367|ATXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2903137207031	2	501.292559	1000.57057	-1.5697	-0.00078686	-2.6476	-0.0013272	-4.2173	-0.0021141	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.86305	1	8754	8754		31.955	2.7848	1	9242300	+		27870	18614	18692	18702	31642	31642					0.07030350685522535
LHVTMALPG	9	Unmodified	_LHVTMALPG_					0	0	0			REV__nc|ENSG00000124019|Q9H5Z6-2|FAM124B	REV__nc|ENSG00000124019|Q9H5Z6-2|FAM124B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.75823974609375	2	469.760038	937.505523	-0.023436	-1.1009E-05	0.93738	0.00044034	0.91394	0.00042933	469.76032512029695	40.348	1.0077	40.3	40.046	41.054	-0.04789					61	38	2	0	0	0	0.69914	1	2558	2558		40.573	4.9543	1	392540	+		27871	18553	18693	18703	31643	31643					0.03427032888021131
LIAAAPGGH	9	Unmodified	_LIAAAPGGH_					0	0	0			REV__ENST00000489606.5_1_3:52280576-52282310:+|nuORF	REV__ENST00000489606.5_1_3:52280576-52282310:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.7310485839844	2	403.729595	805.444637	2.7323	0.0011031	-0.40392	-0.00016307	2.3284	0.00094003	403.72925673314853	99.693	1.4907	100.03	99.108	100.6	0.33294					77	37	3	0	0	0	0.72098	1	12008	12008		39.021	0	1	609450	+		27872	21029	18694	18704	31644	31644					0.03413263900097263
LIAACVPR	8	Unmodified	_LIAACVPR_					0	0	0		ENST00000300181.6_2_7:100075724-100076534:-|nuORF	ENST00000300181.6_2_7:100075724-100076534:-|nuORF	ENST00000300181.6_2_7:100075724-100076534:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7513427734375	2	421.749473	841.484393	2.261	0.00095358	2.5621	0.0010806	4.8232	0.0020342	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.86791	1	7422	7422		28.254	5.2176	1	532850			27873	9793	18695	18705	31645	31645					0.057310675791541144
LIAAGASTV	9	Unmodified	_LIAAGASTV_					0	0	0			REV__ENST00000265070.6_1_5:32174239-32174446:-|nuORF	REV__ENST00000265070.6_1_5:32174239-32174446:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2225036621094	2	401.737086	801.459619	0.43795	0.00017594	-0.36107	-0.00014505	0.076882	3.0886E-05	401.7368455133973	31.097	0.39572	31.177	30.945	31.341	0.079836					12	8	2	0	0	0	0.20789	1	2057	2057		18.324	11.589	1	32098	+		27874	24487	18696	18706	31646	31646					0.05094710977436989
LIAAMGPPGG	10	Unmodified	_LIAAMGPPGG_					0	0	0		ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.24053955078125	2	442.238938	882.463324	0.21245	9.3954E-05	4.1992	0.0018571	4.4117	0.001951	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.85976	1	9463	9463		35.201	2.3883	1	1030200			27875	6969	18697	18707	31647	31647					0.017390574796536384
LIADKQTSL	9	Unmodified	_LIADKQTSL_					0	0	0			REV__ENSG00000128482|ENST00000461366|RNF112	REV__ENSG00000128482|ENST00000461366|RNF112	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.3008728027344	2	494.787307	987.560061	0.99837	0.00049398	3.9201	0.0019396	4.9185	0.0024336	494.78897611444785	97.191	0.6972	97.596	97.379	98.076	0.40498					21	16	2	0	0	0	0.20789	1	11680	11680		40.778	6.8565	1	218090	+		27876	18771	18698	18708	31648	31648					0.06578323240444206
LIADKQTSL	9	Unmodified	_LIADKQTSL_					0	0	0			REV__ENSG00000128482|ENST00000461366|RNF112	REV__ENSG00000128482|ENST00000461366|RNF112	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	494.787307	987.560061	-1.6319	-0.00080747	3.3359	0.0016506	1.704	0.00084311	494.7887779757483	97.003	0.17434	97.205	97.052	97.227	0.20207	-0.19567	-0.00029393	NaN	40.778	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84065	+		27877	18771	18698	18708							0.06578323240444206
LIAESALV	8	Unmodified	_LIAESALV_					0	0	0			REV__nc|ENSG00000095485|Q69YN2-3|CWF19L1	REV__nc|ENSG00000095485|Q69YN2-3|CWF19L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.26495361328125	2	408.247286	814.48002	1.425	0.00058177	-0.5691	-0.00023233	0.85595	0.00034944	408.24683338133195	36.641	1.1823	36.923	36.767	37.949	0.28173					38	28	2	0	0	0	0.4196	1	3002	3002		29.842	1.5873	1	91761	+		27878	17059	18699	18709	31649	31649					0.06535881637228158
LIAESALV	8	Unmodified	_LIAESALV_					0	0	0			REV__nc|ENSG00000095485|Q69YN2-3|CWF19L1	REV__nc|ENSG00000095485|Q69YN2-3|CWF19L1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	408.247286	814.48002	1.1172	0.00045608	-0.23053	-9.4113E-05	0.88664	0.00036197	408.24707469372214	36.437	1.2432	36.877	36.658	37.901	0.44043	-0.022731	0.00012158	NaN	29.842	46	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106190	+		27879	17059	18699	18709							0.06535881637228158
LIAEVIRVY	9	Unmodified	_LIAEVIRVY_					0	0	0			REV__nc|ENSG00000069018|Q9HCX4-2|TRPC7	REV__nc|ENSG00000069018|Q9HCX4-2|TRPC7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3267822265625	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12933	12933		19.36	0.25645	1	4041000	+		27880	16573	18700	18710	31650	31650					0.10939479408125408
LIAFQPKH	8	Unmodified	_LIAFQPKH_					0	0	0			REV__ENSG00000117528|ENST00000370214|ABCD3	REV__ENSG00000117528|ENST00000370214|ABCD3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.55328369140625	2	477.281995	952.549437	0.69655	0.00033245	2.0309	0.00096933	2.7275	0.0013018	477.2834388172439	20.056	0.17665	20.035	19.986	20.162	-0.020924					11	8	2	0	0	0	0.4196	1	462	462		8.2313	0	1	22896	+		27881	18268	18701	18711	31651	31651					0.07126385376648159
LIAFTKMH	8	Unmodified	_LIAFTKMH_					0	0	0		ENSG00000180251|ENST00000295269|SLC9A4	ENSG00000180251|ENST00000295269|SLC9A4	ENSG00000180251|ENST00000295269|SLC9A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.7706604003906	2	480.770406	959.526258	-1.1928	-0.00057344	3.5052	0.0016852	2.3124	0.0011117	480.7719026747457	41.087	0.70248	41.046	40.786	41.489	-0.04081					37	19	3	0	0	0	0.91005	1	3090	3090		42.474	1.6963	1	473220			27882	7320	18702	18712	31652	31652					0.044876232676756445
LIAGKSITCI	10	Unmodified	_LIAGKSITCI_					0	0	0			REV__ENST00000533802.5_2_11:43855633-43876795:+|nuORF	REV__ENST00000533802.5_2_11:43855633-43876795:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8040771484375	2	509.801903	1017.58925	2.6797	0.0013661	1.8365	0.00093626	4.5162	0.0023024	509.80259900501994	99.442	1.3968	99.388	98.868	100.26	-0.053741					77	32	4	0	0	0	0.85934	1	10763	10763		35.618	2.1027	1	480070	+		27883	28357	18703	18713	31653	31653					0.08116144265045477
LIAHKRTHTG	10	Unmodified	_LIAHKRTHTG_					0	0	0		nc|ENSG00000130803|Q96PQ6-3|ZNF317;nc|ENSG00000130803|Q96PQ6-2|ZNF317;nc|ENSG00000130803|Q96PQ6-4|ZNF317;ENST00000591278.5_1_19:9268612-9272106:+|nuORF;ENST00000590152.1_1_19:9267931-9272106:+|nuORF;ENSG00000130803|ENST00000247956|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3297119140625	2	567.330539	1132.64652	-1.2006	-0.00068114	-0.16538	-9.3826E-05	-1.366	-0.00077496	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.86218	1	9633	9633		32.812	0	1	15673000			27884	14909	18704	18714	31654	31654					0.08550747585650242
LIAHKRTHTG	10	Unmodified	_LIAHKRTHTG_					0	0	0		nc|ENSG00000130803|Q96PQ6-3|ZNF317;nc|ENSG00000130803|Q96PQ6-2|ZNF317;nc|ENSG00000130803|Q96PQ6-4|ZNF317;ENST00000591278.5_1_19:9268612-9272106:+|nuORF;ENST00000590152.1_1_19:9267931-9272106:+|nuORF;ENSG00000130803|ENST00000247956|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.329833984375	2	567.330539	1132.64652	0.48094	0.00027285	-1.4928	-0.00084691	-1.0119	-0.00057406	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.82886	1	8921	8921		37.812	9.73	1	6590100			27885	14909	18704	18714	31655	31655					0.08550747585650242
LIAHKRTHTG	10	Unmodified	_LIAHKRTHTG_					0	0	0		nc|ENSG00000130803|Q96PQ6-3|ZNF317;nc|ENSG00000130803|Q96PQ6-2|ZNF317;nc|ENSG00000130803|Q96PQ6-4|ZNF317;ENST00000591278.5_1_19:9268612-9272106:+|nuORF;ENST00000590152.1_1_19:9267931-9272106:+|nuORF;ENSG00000130803|ENST00000247956|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3303833007812	2	567.330539	1132.64652	0.77491	0.00043963	-1.6405	-0.0009307	-0.86557	-0.00049107	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.86218	1	9104	9104		32.812	2.3088	1	6344600			27886	14909	18704	18714	31656	31656					0.08550747585650242
LIAHKRTHTG	10	Unmodified	_LIAHKRTHTG_					0	0	0		nc|ENSG00000130803|Q96PQ6-3|ZNF317;nc|ENSG00000130803|Q96PQ6-2|ZNF317;nc|ENSG00000130803|Q96PQ6-4|ZNF317;ENST00000591278.5_1_19:9268612-9272106:+|nuORF;ENST00000590152.1_1_19:9267931-9272106:+|nuORF;ENSG00000130803|ENST00000247956|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.329833984375	2	567.330539	1132.64652	0.79571	0.00045143	-2.2136	-0.0012558	-1.4178	-0.00080439	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.86218	1	9307	9307		32.812	2.4947	1	18145000			27887	14909	18704	18714	31657	31657					0.08550747585650242
LIAHKRTHTG	10	Unmodified	_LIAHKRTHTG_					0	0	0		nc|ENSG00000130803|Q96PQ6-3|ZNF317;nc|ENSG00000130803|Q96PQ6-2|ZNF317;nc|ENSG00000130803|Q96PQ6-4|ZNF317;ENST00000591278.5_1_19:9268612-9272106:+|nuORF;ENST00000590152.1_1_19:9267931-9272106:+|nuORF;ENSG00000130803|ENST00000247956|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3299560546875	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.86471	1	10931	10931		30.318	2.4355	1	6182600			27888	14909	18704	18714	31658	31658					0.08550747585650242
LIAHQGMHT	9	Oxidation (M)	_LIAHQGM(Oxidation (M))HT_		LIAHQGM(1)HT		LIAHQGM(66)HT	0	0	1		ENSG00000176371|ENST00000546148|ZSCAN2	ENSG00000176371|ENST00000546148|ZSCAN2	ENSG00000176371|ENST00000546148|ZSCAN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2520751953125	2	512.255651	1022.49675	-0.38169	-0.00019552	-3.2458	-0.0016627	-3.6275	-0.0018582	512.2538769688313	54.312	1.3388	54.263	53.816	55.154	-0.049274					65	39	2	0	0	0	0.28163	1	4543	4543		66.429	22.052	1	691410			27889	7072	18705	18715	31659	31659		121			-0.013599407484434778
LIAKEQNDAKN	11	Unmodified	_LIAKEQNDAKN_					0	0	0			REV__ENSG00000174501|ENST00000295246|ANKRD36C;REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	623.3341064453125	2	622.335684	1242.65681	-0.27733	-0.0001726	1.3013	0.00080982	1.0239	0.00063722	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.67568	1	12031	12031		32.751	0	1	419280	+		27890	21999;23179	18706	18716	31660	31660					0.04519265729572908
LIAKIVPASH	10	Unmodified	_LIAKIVPASH_					0	0	0			REV__nc|ENSG00000270379|A2RTY3-5|HEATR9	REV__nc|ENSG00000270379|A2RTY3-5|HEATR9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8273315429688	2	524.829309	1047.64407	-1.5341	-0.00080515	-2.1406	-0.0011234	-3.6747	-0.0019286	524.8280472672277	102.21	1.1307	102.34	101.89	103.02	0.13569					72	27	3	0	0	0	0.86272	1	10647	10647		24.519	1.4767	1	626370	+		27891	23978	18707	18717	31661	31661					0.12214899127980061
LIAKLEKHRAT	11	Unmodified	_LIAKLEKHRAT_					0	0	0		ENSG00000125352|ENST00000371442|RNF113A	ENSG00000125352|ENST00000371442|RNF113A	ENSG00000125352|ENST00000371442|RNF113A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3921508789062	2	640.395879	1278.7772	-0.69345	-0.00044408	-3.5831	-0.0022946	-4.2765	-0.0027387	640.3933606010097	53.872	1.0072	53.872	53.507	54.514	0					69	30	3	0	0	0	0.76322	1	4479	4479		19.104	0.84144	1	206080			27892	3383	18708	18718	31662	31662					0.14896718513841734
LIALLGAFG	9	Unmodified	_LIALLGAFG_					0	0	0			REV__nc|ENSG00000122188|Q8IWV1-3|LAX1	REV__nc|ENSG00000122188|Q8IWV1-3|LAX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7713317871094	2	437.773471	873.53239	-2.0028	-0.00087676	-4.2532	-0.0018619	-6.256	-0.0027387	437.7717477191302	40.214	2.554	40.591	39.609	42.163	0.3765					138	67	4	0	0	0	0.7932	1	3356	3356		21.702	0	1	10119000	+		27893	18483	18709	18719	31663	31663					0.09056464770844741
LIALLKKRRN	10	Unmodified	_LIALLKKRRN_					0	0	0			REV__ENST00000547842.1_1_12:49225833-49226274:-|nuORF	REV__ENST00000547842.1_1_12:49225833-49226274:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.8796997070312	2	612.916781	1223.81901	3.0911	0.0018946	-0.73829	-0.00045251	2.3528	0.0014421	612.915967765249	105.08	0.16836	105.04	104.93	105.1	-0.04039					6	3	2	0	0	0	0.37624	1	11576	11576		16.473	3.6614	1	49993	+		27894	28560	18710	18720	31664	31664					0.21605318993033507
LIALLKKRRN	10	Unmodified	_LIALLKKRRN_					0	0	0			REV__ENST00000547842.1_1_12:49225833-49226274:-|nuORF	REV__ENST00000547842.1_1_12:49225833-49226274:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.8795776367188	2	612.916781	1223.81901	-1.2474	-0.00076456	0.53356	0.00032703	-0.71385	-0.00043753	612.9167391273984	104.45	0.51979	104.54	104.19	104.71	0.093857					19	12	2	0	0	0	0.37624	1	11049	11049		37.159	18.056	1	119370	+		27895	28560	18710	18720	31665	31665					0.21605318993033507
LIALPTESS	9	Unmodified	_LIALPTESS_					0	0	0		ENSG00000135919|ENST00000409304|SERPINE2;nc|ENSG00000135919|P07093|SERPINE2;nc|ENSG00000135919|P07093-3|SERPINE2;ENST00000478966.1_1_2:224840586-224849719:-|nuORF	ENSG00000135919|ENST00000409304|SERPINE2	ENSG00000135919|ENST00000409304|SERPINE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2746887207031	2	465.760758	929.506963	-1.6399	-0.0007638	4.3542	0.002028	2.7143	0.0012642	465.76265788100574	52.426	0.92511	52.426	51.912	52.837	0					34	24	2	0	0	0	0.76996	1	4268	4268		33.516	1.5607	1	107660			27896	4068	18711	18721	31666	31666					0.03938945457775844
LIALVPQP	8	Unmodified	_LIALVPQP_					0	0	0		ENST00000312251.7_1_16:5074987-5075392:-|nuORF	ENST00000312251.7_1_16:5074987-5075392:-|nuORF	ENST00000312251.7_1_16:5074987-5075392:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	425.7748718261719	2	425.773471	849.53239	0.42545	0.00018115	3.0537	0.0013002	3.4791	0.0014813	425.7747050516017	38.994	1.8218	39.005	38.08	39.902	0.011173					147	42	5	0	0	0	0.80127	1	2724	2724		16.705	1.0687	1	15234000			27897	9939	18712	18722	31667	31667					0.10160464770854105
LIAQGPVKTY	10	Unmodified	_LIAQGPVKTY_					0	0	0		nc|ENSG00000116748|P23109-2|AMPD1;ENSG00000116748|ENST00000520113|AMPD1	nc|ENSG00000116748|P23109-2|AMPD1	nc|ENSG00000116748|P23109-2|AMPD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.318359375	2	545.318774	1088.623	-0.68757	-0.00037494	-3.0506	-0.0016636	-3.7382	-0.0020385	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.86218	2	8414	8414;8474		32.812	2.3088	1	3608000			27898	2944	18713	18723	31668;31669	31668					0.08222889028479585
LIAQGPVKTY	10	Unmodified	_LIAQGPVKTY_					0	0	0		nc|ENSG00000116748|P23109-2|AMPD1;ENSG00000116748|ENST00000520113|AMPD1	nc|ENSG00000116748|P23109-2|AMPD1	nc|ENSG00000116748|P23109-2|AMPD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3170776367188	2	545.318774	1088.623	0.15103	8.2357E-05	-4.1145	-0.0022437	-3.9634	-0.0021613	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.8545	1	8627	8627		36.447	2.2742	1	5755000			27899	2944	18713	18723	31670	31670					0.08222889028479585
LIAQGPVKTY	10	Unmodified	_LIAQGPVKTY_					0	0	0		nc|ENSG00000116748|P23109-2|AMPD1;ENSG00000116748|ENST00000520113|AMPD1	nc|ENSG00000116748|P23109-2|AMPD1	nc|ENSG00000116748|P23109-2|AMPD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3168334960938	2	545.318774	1088.623	-1.3538	-0.00073823	-2.3594	-0.0012866	-3.7132	-0.0020249	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.74274	2	10501	10404;10501		42.396	8.2236	1	5184000			27900	2944	18713	18723	31671;31672	31672					0.08222889028479585
LIAQPRLCL	9	Unmodified	_LIAQPRLCL_					0	0	0		ENST00000455833.6_2_1:19230994-19231414:-|nuORF	ENST00000455833.6_2_1:19230994-19231414:-|nuORF	ENST00000455833.6_2_1:19230994-19231414:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8101196289062	2	513.810062	1025.60557	-0.38168	-0.00019611	-1.7037	-0.00087537	-2.0854	-0.0010715	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.7932	1	4355	4355		26.796	1.3459	1	926440			27901	11958	18714	18724	31673	31673					0.09379270221802471
LIAQVLLLIIG	11	Unmodified	_LIAQVLLLIIG_					0	0	0			REV__ENSG00000120457|ENST00000529694|KCNJ5	REV__ENSG00000120457|ENST00000529694|KCNJ5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.3766479492188	2	583.399567	1164.78458	-2.0431	-0.0011919	3.0167	0.0017599	0.97363	0.00056801	583.4012318266615	41.61	0.68653	42.244	42.06	42.746	0.6339					28	17	3	0	0	0	0.17359	1	3649	3649		34.173	18.531	1	399180	+		27902	18412	18715	18725	31674	31674					0.20878058061566662
LIAQVRSTTT	10	Unmodified	_LIAQVRSTTT_					0	0	0			REV__ENST00000486544.1_22:24383289-24384231:-|nuORF	REV__ENST00000486544.1_22:24383289-24384231:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3170166015625	2	545.316763	1088.61897	1.9901	0.0010853	-2.103	-0.0011468	-0.1129	-6.1566E-05	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.86763	1	9072	9072		26.693	0	1	4704900	+		27903	27555	18716	18726	31675	31675					0.07820799534761136
LIARITRLA	9	Unmodified	_LIARITRLA_					0	0	0		ENST00000468588.1_1_1:109779081-109779162:+|nuORF	ENST00000468588.1_1_1:109779081-109779162:+|nuORF	ENST00000468588.1_1_1:109779081-109779162:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.841064453125	2	513.842751	1025.67095	0.92898	0.00047735	-0.96955	-0.00049819	-0.040569	-2.0846E-05	513.842134150575	21.206	0.44043	21.274	21.065	21.506	0.068251					29	15	3	0	0	0	0.7932	1	538	538		14.865	1.9057	1	57532			27904	12182	18717	18727	31676	31676					0.15914007739161207
LIASAALPS	9	Unmodified	_LIASAALPS_					0	0	0			REV__nc|ENSG00000139910|P51513-5|NOVA1	REV__nc|ENSG00000139910|P51513-5|NOVA1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7516174316406	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.687	1	77.74	77.24	78.24	0.052696								0	0	0	0.32469	1	7524	7524		21.96	1.4781	1		+		27905	19580	18718	18728	31677	31677					0.06383284011508294
LIATLVYALFR	11	Unmodified	_LIATLVYALFR_					0	0	0		ENST00000528318.5_1_8:42716773-42751856:-|nuORF;nc|ENSG00000120925|Q96K19-5|RNF170;nc|ENSG00000120925|Q96K19-3|RNF170;nc|ENSG00000120925|Q96K19-2|RNF170;ENSG00000120925|ENST00000527424|RNF170	ENST00000528318.5_1_8:42716773-42751856:-|nuORF	ENST00000528318.5_1_8:42716773-42751856:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3922729492188	2	640.392273	1278.76999	0.18689	0.00011969	0.72031	0.00046128	0.90721	0.00058097	640.3926444536196	51.078	1.0383	51.513	50.994	52.033	0.43505					62	24	3	0	0	0	0.73893	1	5053	5053		24.519	2.5593	1	1259400			27906	13299	18719	18729	31678	31678					0.14175985913379918
LIAVDRRG	8	Unmodified	_LIAVDRRG_					0	0	0		nc|ENSG00000168803|Q6DHV7-2|ADAL;nc|ENSG00000168803|Q6DHV7-3|ADAL;ENSG00000168803|ENST00000562188|ADAL	nc|ENSG00000168803|Q6DHV7-2|ADAL	nc|ENSG00000168803|Q6DHV7-2|ADAL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2742919921875	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.85277	1	9491	9491		25.45	0.94616	1	26247000			27907	6437	18720	18730	31679	31679					0.08152313228515595
LIAVDRRG	8	Unmodified	_LIAVDRRG_					0	0	0		nc|ENSG00000168803|Q6DHV7-2|ADAL;nc|ENSG00000168803|Q6DHV7-3|ADAL;ENSG00000168803|ENST00000562188|ADAL	nc|ENSG00000168803|Q6DHV7-2|ADAL	nc|ENSG00000168803|Q6DHV7-2|ADAL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27423095703125	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.87479	1	9973	9973		30.504	0.6621	1	47650000			27908	6437	18720	18730	31680	31680					0.08152313228515595
LIAVFNITGK	10	Unmodified	_LIAVFNITGK_					0	0	0			REV__ENSG00000168038|ENST00000301831|ULK4;REV__ENST00000460978.1_1_3:41979458-41996251:-|nuORF	REV__ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3264770507812	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.86763	1	12236	12236		26.693	1.1189	1	4041000	+		27909	21454;27019	18721	18731	31681	31681					0.10939479408125408
LIAVGIRFH	9	Unmodified	_LIAVGIRFH_					0	0	0			REV__ENSG00000117597|ENST00000491415|UTP25	REV__ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.316162109375	2	513.316369	1024.61818	0.32019	0.00016436	-0.42836	-0.00021989	-0.10817	-5.5524E-05	513.3159908318282	43.284	1.4208	43.257	42.839	44.259	-0.026768					81	33	4	0	0	0	0.7932	1	3319	3319		25.45	2.4077	1	394850	+		27910	18271	18722	18732	31682	31682					0.10686049676360199
LIAVGIRFH	9	Unmodified	_LIAVGIRFH_					0	0	0			REV__ENSG00000117597|ENST00000491415|UTP25	REV__ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3171997070312	2	513.316369	1024.61818	-0.78903	-0.00040502	0.72126	0.00037024	-0.06777	-3.4788E-05	513.316563461299	43.382	2.0824	43.347	42.842	44.924	-0.035816					87	48	3	0	0	0	0.76402	1	3452	3452		35.201	0	1	377070	+		27911	18271	18722	18732	31683	31683					0.10686049676360199
LIAVGIRFH	9	Unmodified	_LIAVGIRFH_					0	0	0			REV__ENSG00000117597|ENST00000491415|UTP25	REV__ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3179321289062	2	513.316369	1024.61818	-0.36813	-0.00018897	1.0583	0.00054322	0.69013	0.00035425	513.3169589115231	53.646	1.4284	53.622	52.782	54.21	-0.024754					61	35	3	0	0	0	0.76996	1	4781	4781		33.516	0	1	246220	+		27912	18271	18722	18732	31684	31684					0.10686049676360199
LIAVGIRFH	9	Unmodified	_LIAVGIRFH_					0	0	0			REV__ENSG00000117597|ENST00000491415|UTP25	REV__ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.316650390625	2	513.316369	1024.61818	-0.35462	-0.00018203	1.0148	0.00052089	0.66014	0.00033886	513.3169096731813	53.695	2.201	53.717	52.714	54.915	0.022537					86	65	3	0	0	0	0.7932	1	4736	4736		25.45	1.2474	1	230160	+		27913	18271	18722	18732	31685	31685					0.10686049676360199
LIAVKKGSYDM	11	Unmodified	_LIAVKKGSYDM_					0	0	0		ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.879150390625	2	612.836474	1223.65839	3.0916	0.0018947	-2.484	-0.0015223	0.60764	0.00037238	613.3377405362244	104.71	0.27984	104.67	104.45	104.73	-0.04039					9	6	2	0	0	0	0.16822	1	11516	11516		62.107	14.45	1	345400			27914	4859	18723	18733	31686	31686					0.055511834939579785
LIAVLGIDI	9	Unmodified	_LIAVLGIDI_					0	0	0		chr11:4652656-4652738|13|15.92|0.07|7.91|+|2|OR51E1,None|1	chr11:4652656-4652738|13|15.92|0.07|7.91|+|2|OR51E1,None|1	chr11:4652656-4652738|13|15.92|0.07|7.91|+|2|OR51E1,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8004455566406	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	2	3568	3568;3605		24.203	5.8783	1	1294000			27915	102	18724	18734	31687;31688	31687					0.11905003113804469
LIAVLLVWSLW	11	Unmodified	_LIAVLLVWSLW_					0	0	0			REV__nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D	REV__nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.27276611328125	3	438.272437	1311.79548	-0.96188	-0.00042157	2.4363	0.0010678	1.4744	0.00064619	438.27344423982936	106.61	0.75021	106.61	106.14	106.89	0					48	16	4	0	0	0	0.73621	1	11044	11044		25.126	4.0938	1	872140	+		27916	30275	18725	18735	31689	31689					0.15205460435845453
LIAVLLVWSLW	11	Unmodified	_LIAVLLVWSLW_					0	0	0			REV__nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D	REV__nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2728576660156	3	438.272437	1311.79548	2.7278	0.0011955	-1.4492	-0.00063515	1.2786	0.00056036	438.2717172692411	106.49	1.037	106.46	105.98	107.01	-0.034134					77	23	5	0	0	0	0.73621	1	11741	11741		25.126	0.89417	1	3866800	+		27917	30275	18725	18735	31690	31690					0.15205460435845453
LIAVLWAVALL	11	Unmodified	_LIAVLWAVALL_					0	0	0		nc|ENSG00000102539|O43193-2|MLNR;ENSG00000102539|ENST00000218721|MLNR	nc|ENSG00000102539|O43193-2|MLNR	nc|ENSG00000102539|O43193-2|MLNR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8667602539062	2	591.38646	1180.75837	-1.3176	-0.00077919	3.2363	0.0019139	1.9187	0.0011347	591.3892490792074	103.81	0.20036	103.92	103.77	103.97	0.11494					6	4	2	0	0	0	0.17277	1	10932	10932		17.365	0	1	107280			27918	2008	18726	18736	31691	31691					0.17521788890076095
LIAVRVFYR	9	Unmodified	_LIAVRVFYR_					0	0	0		ENSG00000133216|ENST00000374630|EPHB2;nc|ENSG00000133216|P29323-3|EPHB2;nc|ENSG00000133216|P29323|EPHB2	ENSG00000133216|ENST00000374630|EPHB2	ENSG00000133216|ENST00000374630|EPHB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.854248046875	2	568.850576	1135.6866	1.5207	0.00086506	2.9075	0.0016539	4.4282	0.002519	568.8521463691729	102.21	3.6255	102.25	101.63	105.26	0.04319					340	87	6	0	0	0	0.76996	3	11246	11160;11235;11246		33.516	6.7195	1	51352000			27919	3866	18727	18737	31692;31693;31694	31694					0.12418294256212903
LIAVRVFYR	9	Unmodified	_LIAVRVFYR_					0	0	0		ENSG00000133216|ENST00000374630|EPHB2;nc|ENSG00000133216|P29323-3|EPHB2;nc|ENSG00000133216|P29323|EPHB2	ENSG00000133216|ENST00000374630|EPHB2	ENSG00000133216|ENST00000374630|EPHB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8545532226562	2	568.850576	1135.6866	0.5226	0.00029728	3.8523	0.0021914	4.3749	0.0024887	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.76996	3	10911	10887;10911;11158		33.516	10.473	1	84800000			27920	3866	18727	18737	31695;31696;31697	31696					0.12418294256212903
LIAVRVFYR	9	Unmodified	_LIAVRVFYR_					0	0	0		ENSG00000133216|ENST00000374630|EPHB2;nc|ENSG00000133216|P29323-3|EPHB2;nc|ENSG00000133216|P29323|EPHB2	ENSG00000133216|ENST00000374630|EPHB2	ENSG00000133216|ENST00000374630|EPHB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8538818359375	2	568.850576	1135.6866	0.87009	0.00049495	3.5097	0.0019965	4.3798	0.0024914	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.7932	1	10912	10912		25.45	6.0902	1	78933000			27921	3866	18727	18737	31698	31698					0.12418294256212903
LIAVVDIL	8	Unmodified	_LIAVVDIL_					0	0	0			REV__ENSG00000102057|ENST00000218176|KCND1	REV__ENSG00000102057|ENST00000218176|KCND1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.26165771484375	2	428.281129	854.547705	1.4206	0.00060843	3.5991	0.0015414	5.0197	0.0021498	428.2827342855315	90.887	0.43312	90.82	90.722	91.155	-0.067085					17	10	2	0	0	0	0.4196	1	9556	9556		29.842	0	1	378350	+		27922	17322	18728	18738	31699	31699					0.11461331568034439
LIAVVDIL	8	Unmodified	_LIAVVDIL_					0	0	0			REV__ENSG00000102057|ENST00000218176|KCND1	REV__ENSG00000102057|ENST00000218176|KCND1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.26165771484375	2	428.281129	854.547705	-1.6667	-0.0007138	1.3548	0.00058024	-0.31185	-0.00013356	428.2815107051737	90.747	0.19492	90.964	90.865	91.06	0.21736					5	4	2	0	0	0	0.4196	1	9100	9100		39.021	0	1	197800	+		27923	17322	18728	18738	31700	31700					0.11461331568034439
LICAPRKK	8	Unmodified	_LICAPRKK_					0	0	0		ENST00000493155.1_1_1:213124884-213125846:+|nuORF	ENST00000493155.1_1_1:213124884-213125846:+|nuORF	ENST00000493155.1_1_1:213124884-213125846:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.79095458984375	2	464.791672	927.568792	0.17035	7.9177E-05	-2.224	-0.0010337	-2.0536	-0.00095451	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.86791	1	1736	1736		28.254	1.4582	1	283920			27924	12719	18729	18739	31701	31701					0.10211018395921201
LICKRLLKF	9	Unmodified	_LICKRLLKF_					0	0	0			REV__ENSG00000108773|ENST00000225916|KAT2A	REV__ENSG00000108773|ENST00000225916|KAT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.363525390625	2	567.365004	1132.71546	0.36024	0.00020439	-2.7921	-0.0015842	-2.4319	-0.0013798	567.3632714206227	44.36	2.296	44.409	43.67	45.966	0.048996					151	56	4	0	0	0	0.76996	1	3044	3044		33.516	0	1	1558100	+		27925	17729	18730	18740	31702	31702					0.15440695561005668
LICMKKRSK	9	Unmodified	_LICMKKRSK_					0	0	0			REV__ENSG00000117758|ENST00000373943|STX12	REV__ENSG00000117758|ENST00000373943|STX12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8302612304688	2	553.830472	1105.64639	-0.64284	-0.00035603	-0.11122	-6.1597E-05	-0.75406	-0.00041762	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.7932	1	8504	8504		25.45	0.93098	1	1181400	+		27926	18281	18731	18741	31703	31703					0.09779288269783137
LICPLKEK	8	Unmodified	_LICPLKEK_					0	0	0			REV__ENSG00000198722|ENST00000635942|UNC13B	REV__ENSG00000198722|ENST00000635942|UNC13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.290283203125	2	472.285889	942.557224	2.1469	0.001014	2.0105	0.00094952	4.1574	0.0019635	472.2867264071782	114.66	1.2655	114.67	114.37	115.64	0.0094528					102	61	2	0	0	0	0.884	1	13843	13843		33.516	1.5607	1	83672	+		27927	23365	18732	18742	31704	31704					0.08364776581913702
LICPLPHCRP	10	Unmodified	_LICPLPHCRP_					0	0	0			REV__ENSG00000168754|ENST00000490605|FAM178B	REV__ENSG00000168754|ENST00000490605|FAM178B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.8020629882812	2	574.806996	1147.59944	-0.92196	-0.00052995	0.80875	0.00046487	-0.11322	-6.5077E-05	574.8069824667461	33.956	0.7061	33.951	33.628	34.334	-0.0047379					37	16	4	0	0	0	0.86452	1	1987	1987		30.504	0	1	142260	+		27928	21515	18733	18743	31705	31705					0.031544287186306974
LICRNKFLL	9	Unmodified	_LICRNKFLL_					0	0	0		nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-6|NF1;ENSG00000196712|ENST00000358273|NF1;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-4|NF1	nc|ENSG00000196712|P21359-2|NF1	nc|ENSG00000196712|P21359-2|NF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.841064453125	2	560.338987	1118.66342	1.3844	0.00077572	1.2296	0.00068898	2.6139	0.0014647	560.3396080868185	114.62	2.2118	114.64	113.84	116.05	0.026466					86	62	2	0	0	0	0.7932	1	12453	12453		24.203	4.206	1	96310			27929	8095	18734	18744	31706	31706					0.10883532147249753
LICRVPNS	8	Unmodified	_LICRVPNS_					0	0	0		ENST00000244769.8_1_6:16306936-16307002:-|nuORF	ENST00000244769.8_1_6:16306936-16307002:-|nuORF	ENST00000244769.8_1_6:16306936-16307002:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2480773925781	2	451.249837	900.485122	-0.10221	-4.6121E-05	-2.4347	-0.0010987	-2.537	-0.0011448	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.8347	1	6394	6394		23.042	0	1	178200			27930	9265	18735	18745	31707	31707					0.0308986222820522
LICSISLLTL	10	Unmodified	_LICSISLLTL_					0	0	0			REV__ENST00000355431.7_1_14:58838797-58838899:+|nuORF	REV__ENST00000355431.7_1_14:58838797-58838899:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3272094726562	2	538.325211	1074.63587	0.070634	3.8024E-05	2.8796	0.0015502	2.9503	0.0015882	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.74274	2	10771	10771;10905		42.396	5.0025	1	109840000	+		27931	25377	18736	18746	31708;31709	31708					0.10153584096360646
LIDARGVR	8	Unmodified	_LIDARGVR_					0	0	0			REV__ENSG00000065802|ENST00000264607|ASB1	REV__ENSG00000065802|ENST00000264607|ASB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2746276855469	2	450.274701	898.534849	0.49619	0.00022342	-0.76811	-0.00034586	-0.27192	-0.00012244	450.2742908789494	92.742	1.9986	93.189	92.476	94.475	0.44661					184	49	6	0	0	0	0.884	1	11150	11150		33.516	0	1	16577000	+		27932	16509	18737	18747	31710	31710					0.08152313228526964
LIDCFTGG	8	Unmodified	_LIDCFTGG_					0	0	0		ENSG00000162426|ENST00000471889|SLC45A1;ENST00000497660.5_1_1:8390216-8404070:+|nuORF	ENSG00000162426|ENST00000471889|SLC45A1	ENSG00000162426|ENST00000471889|SLC45A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1937561035156	2	413.194196	824.37384	0.36856	0.00015229	-1.5039	-0.00062141	-1.1354	-0.00046913	413.19353569569154	84.288	3.3037	84.723	83.664	86.967	0.43538					144	80	2	0	0	0	0.884	1	9965	9965		33.516	8.0654	1	9340100			27933	5688	18738	18748	31711	31711					-0.0453719719973833
LIDESPIAIG	10	Unmodified	_LIDESPIAIG_					0	0	0			REV__nc|ENSG00000165730|Q6ZVD7-2|STOX1	REV__nc|ENSG00000165730|Q6ZVD7-2|STOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.2857666015625	2	514.28714	1026.55973	-0.050448	-2.5945E-05	-0.14695	-7.5575E-05	-0.1974	-0.00010152	514.2869386950687	81.093	0.93762	81.157	80.839	81.777	0.064384					49	21	4	0	0	0	0.4094	2	8010	7944;8010		63.306	19.189	1	381380	+		27934	21210	18739	18749	31712;31713	31713					0.04750903520539396
LIDGEYKDYLA	11	Unmodified	_LIDGEYKDYLA_					0	0	0		nc|ENSG00000123243|Q86UX2|ITIH5;ENSG00000123243|ENST00000397146|ITIH5;nc|ENSG00000123243|Q86UX2-3|ITIH5	nc|ENSG00000123243|Q86UX2|ITIH5	nc|ENSG00000123243|Q86UX2|ITIH5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.88885498046875	3	433.887088	1298.63943	0.76766	0.00033308	3.1164	0.0013522	3.8841	0.0016853	433.888297847271	31.717	1.3706	31.824	31.205	32.575	0.10707					55	31	3	0	0	0	0.71207	1	2187	2187		29.551	1.9068	1	305350			27935	3266	18740	18750	31714	31714					0.0020592540392954106
LIDHRFLL	8	Unmodified	_LIDHRFLL_					0	0	0		ENSG00000105851|ENST00000496166|PIK3CG	ENSG00000105851|ENST00000496166|PIK3CG	ENSG00000105851|ENST00000496166|PIK3CG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8065185546875	2	513.808377	1025.6022	-0.12671	-6.5103E-05	1.3179	0.00067714	1.1912	0.00061204	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.90465	1	3939	3939		40.573	0	1	1731500			27936	2256	18741	18751	31715	31715					0.09042343439477918
LIDKKWKPLQ	10	Unmodified	_LIDKKWKPLQ_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8930053710938	2	634.889898	1267.76524	-0.0069402	-4.4063E-06	4.0361	0.0025625	4.0292	0.0025581	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.85934	1	11089	11089		35.618	0.46626	1	31286000			27937	2794	18742	18752	31716	31716					0.14207101770671215
LIDKKWKPLQ	10	Unmodified	_LIDKKWKPLQ_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8929443359375	2	634.889898	1267.76524	-0.0080987	-5.1418E-06	3.0358	0.0019274	3.0277	0.0019223	634.8926566400073	107.77	0.43301	107.77	107.4	107.83	0					14	10	2	0	0	0	0.85934	1	11205	11205		35.618	0.46626	1	10685000			27938	2794	18742	18752	31717	31717					0.14207101770671215
LIDKKWKPLQ	10	Unmodified	_LIDKKWKPLQ_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8932495117188	2	634.889898	1267.76524	1.3476	0.00085558	2.8664	0.0018198	4.214	0.0026754	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.71042	1	11657	11657		44.117	1.7207	1	42647000			27939	2794	18742	18752	31718	31718					0.14207101770671215
LIDKKWKPLQ	10	Unmodified	_LIDKKWKPLQ_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8928833007812	2	634.889898	1267.76524	1.9684	0.0012497	2.2129	0.0014049	4.1812	0.0026546	634.8913842364989	105.48	2.7267	105.63	104.93	107.65	0.15583					244	94	5	0	0	0	0.85934	1	12831	12831		35.618	0.46626	1	2461800			27940	2794	18742	18752	31719	31719					0.14207101770671215
LIDKKWKPLQ	10	Unmodified	_LIDKKWKPLQ_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8930053710938	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.17	1	105.4	104.9	105.9	0.2268								0	0	0	0.45132	1	12857	12857		37.159	2.0071	1				27941	2794	18742	18752	31720	31720					0.14207101770671215
LIDKTKLLQSD	11	Unmodified	_LIDKTKLLQSD_					0	0	0			REV__ENSG00000157578|ENST00000288350|LCA5L	REV__ENSG00000157578|ENST00000288350|LCA5L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.3692016601562	2	637.371735	1272.72892	1.5361	0.00097909	-3.4409	-0.0021931	-1.9048	-0.001214	637.3694440717433	105.45	2.1927	105.61	104.92	107.11	0.15924					169	54	4	0	0	0	0.732	2	11223	11223;11269		26.063	2.5407	1	2533600	+		27942	20551	18743	18753	31721;31722	31721					0.10346180083274703
LIDLALAF	8	Unmodified	_LIDLALAF_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2637634277344	2	438.265479	874.516405	-0.29451	-0.00012907	-4.3477	-0.0019054	-4.6422	-0.0020345	438.26353377141464	45.157	0.64037	45.088	44.938	45.579	-0.068634					23	15	2	0	0	0	0.80963	1	3222	3222		15.636	0	1	109570			27943	720	18744	18754	31723	31723					0.07412758533939723
LIDLPPTG	8	Unmodified	_LIDLPPTG_					0	0	0			REV__ENSG00000167646|ENST00000524407|DNAAF3	REV__ENSG00000167646|ENST00000524407|DNAAF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2379455566406	2	413.239461	824.46437	-1.33	-0.0005496	-1.1028	-0.00045573	-2.4328	-0.0010053	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.91005	3	7156	6975;7096;7156		52.299	15.271	1	895630	+		27944	21410	18745	18755	31724;31725;31726	31726					0.045115951201864846
LIDLPPTG	8	Unmodified	_LIDLPPTG_					0	0	0			REV__ENSG00000167646|ENST00000524407|DNAAF3	REV__ENSG00000167646|ENST00000524407|DNAAF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.237548828125	2	413.239461	824.46437	-0.18778	-7.7597E-05	-2.7175	-0.001123	-2.9053	-0.0012006	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.85277	6	7304	7304;7380;7411;7421;7560;7592		35.201	7.3185	1	1747900	+		27945	21410	18745	18755	31727;31728;31729;31730;31731;31732	31727					0.045115951201864846
LIDLPPTG	8	Unmodified	_LIDLPPTG_					0	0	0			REV__ENSG00000167646|ENST00000524407|DNAAF3	REV__ENSG00000167646|ENST00000524407|DNAAF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.23736572265625	2	413.239461	824.46437	-0.12335	-5.0972E-05	-2.6877	-0.0011107	-2.811	-0.0011616	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.86288	9	7368	7368;7477;7509;7529;7582;7700;7759;7800;7842		35.201	6.9464	1	1978800	+		27946	21410	18745	18755	31733;31734;31735;31736;31737;31738;31739;31740;31741	31733					0.045115951201864846
LIDLPPTG	8	Unmodified	_LIDLPPTG_					0	0	0			REV__ENSG00000167646|ENST00000524407|DNAAF3	REV__ENSG00000167646|ENST00000524407|DNAAF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.237548828125	2	413.239461	824.46437	-1.8341	-0.00075793	0.52075	0.00021519	-1.3134	-0.00054274	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.884	4	7064	7064;7113;7274;7313		35.201	5.2613	1	2012200	+		27947	21410	18745	18755	31742;31743;31744;31745	31742					0.045115951201864846
LIDLPPTG	8	Unmodified	_LIDLPPTG_					0	0	0			REV__ENSG00000167646|ENST00000524407|DNAAF3	REV__ENSG00000167646|ENST00000524407|DNAAF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.23809814453125	2	413.239461	824.46437	0.52355	0.00021635	-1.497	-0.00061862	-0.97345	-0.00040227	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.84634	3	7320	7259;7302;7320		60.294	12.637	1	1692300	+		27948	21410	18745	18755	31746;31747;31748	31748					0.045115951201864846
LIDLPPTG	8	Unmodified	_LIDLPPTG_					0	0	0			REV__ENSG00000167646|ENST00000524407|DNAAF3	REV__ENSG00000167646|ENST00000524407|DNAAF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2380065917969	2	413.239461	824.46437	-1.5467	-0.00063915	0.5911	0.00024426	-0.95558	-0.00039489	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.88915	2	7262	7262;7346		35.201	1.6851	1	1341700	+		27949	21410	18745	18755	31749;31750	31749					0.045115951201864846
LIDLPPTG	8	Unmodified	_LIDLPPTG_					0	0	0			REV__ENSG00000167646|ENST00000524407|DNAAF3	REV__ENSG00000167646|ENST00000524407|DNAAF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2380065917969	2	413.239461	824.46437	0.89927	0.00037161	-3.9864	-0.0016473	-3.0871	-0.0012757	413.23775271826133	77.246	5.6199	77.651	75.794	81.414	0.40531					207	140	2	0	0	0	0.884	5	8812	8645;8679;8775;8812;8859		50.025	5.4935	1	1083000	+		27950	21410	18745	18755	31751;31752;31753;31754;31755	31754					0.045115951201864846
LIDLPPTG	8	Unmodified	_LIDLPPTG_					0	0	0			REV__ENSG00000167646|ENST00000524407|DNAAF3	REV__ENSG00000167646|ENST00000524407|DNAAF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.23846435546875	2	413.239461	824.46437	-0.091267	-3.7715E-05	-2.9715	-0.001228	-3.0628	-0.0012657	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.85277	4	8668	8620;8668;8843;8867		42.474	7.057	1	1247200	+		27951	21410	18745	18755	31756;31757;31758;31759	31757					0.045115951201864846
LIDLVVAPG	9	Unmodified	_LIDLVVAPG_					0	0	0			REV__nc|ENSG00000103932|Q9BWH6-2|RPAP1	REV__nc|ENSG00000103932|Q9BWH6-2|RPAP1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.7774353027344	2	448.776211	895.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.705	1	69.705	69.205	70.205	0								0	0	0	0.31472	1	6215	6215		25.45	0	1		+		27952	17429	18746	18756	31760	31760					0.08592143562668753
LIDMFWCI	8	Oxidation (M)	_LIDM(Oxidation (M))FWCI_		LIDM(1)FWCI		LIDM(66)FWCI	0	0	1			REV__ENST00000222553.7_1_7:105891375-105891519:-|nuORF	REV__ENST00000222553.7_1_7:105891375-105891519:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.7487182617188	2	528.748282	1055.48201	-1.5168	-0.00080202	1.4168	0.00074913	-0.10003	-5.289E-05	528.7488924032159	87.744	1.8146	87.913	87.394	89.208	0.16922					100	42	3	0	0	0	0.73619	1	8633	8633		65.897	8.4448	1	628110	+		27953	24162	18747	18757	31761	31761		376			-0.04351148940827443
LIDPVEHRPVS	11	Unmodified	_LIDPVEHRPVS_					0	0	0			REV__ENSG00000120156|ENST00000380036|TEK	REV__ENSG00000120156|ENST00000380036|TEK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.5693359375	3	421.234822	1260.68264	0.22521	9.4866E-05	-0.2644	-0.00011137	-0.039189	-1.6508E-05	421.2345198926206	44.301	0.69176	44.35	44.089	44.781	0.048996					32	16	3	0	0	0	0.54689	1	3132	3132		48.602	2.6934	1	196630	+		27954	18400	18748	18758	31762	31762					0.0627215997183157
LIDQKLQLVF	10	Unmodified	_LIDQKLQLVF_					0	0	0			REV__nc|ENSG00000115109|Q9HCM4-2|EPB41L5	REV__nc|ENSG00000115109|Q9HCM4-2|EPB41L5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2474670410156	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.57	1	117.55	117.05	118.05	-0.02433								0	0	0	0.45132	1	13016	13016		23.523	0.94304	1		+		27955	18085	18749	18759	31763	31763					0.12347706642390222
LIDTCALGF	9	Unmodified	_LIDTCALGF_					0	0	0			REV__nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	REV__nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.74237060546875	2	476.744053	951.473554	0.12568	5.9919E-05	-3.4004	-0.0016211	-3.2747	-0.0015612	476.7422323018569	78.776	0.58596	78.723	78.44	79.026	-0.053551					30	14	3	0	0	0	0.76996	1	7857	7857		33.516	0.70317	1	138270	+		27956	16910	18750	18760	31764	31764					-0.004123795857935875
LIDVPLKSNLL	11	Unmodified	_LIDVPLKSNLL_					0	0	0			REV__ENST00000464478.5_1_1:51924787-51930980:-|nuORF	REV__ENST00000464478.5_1_1:51924787-51930980:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	612.8796997070312	2	612.881739	1223.74892	-0.12345	-7.5661E-05	-2.9588	-0.0018134	-3.0822	-0.0018891	612.8794735432923	104.89	2.8735	104.89	104.24	107.11	0					239	67	7	0	0	0	0.59831	2	10832	10832;10930		42.864	7.246	1	38592000	+		27957	16899	18751	18761	31765;31766	31765					0.14599975813894162
LIDVPLKSNLL	11	Unmodified	_LIDVPLKSNLL_					0	0	0			REV__ENST00000464478.5_1_1:51924787-51930980:-|nuORF	REV__ENST00000464478.5_1_1:51924787-51930980:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.8793334960938	2	612.881739	1223.74892	-0.38675	-0.00023703	-3.1687	-0.0019421	-3.5555	-0.0021791	612.8795891868975	104.75	3.6593	104.74	104.15	107.81	-0.014809					295	86	6	0	0	0	0.68431	1	11301	11301		31.53	0	1	46932000	+		27958	16899	18751	18761	31767	31767					0.14599975813894162
LIDVTYPLW	9	Unmodified	_LIDVTYPLW_					0	0	0			REV__ENSG00000146385|ENST00000275200|TAAR8	REV__ENSG00000146385|ENST00000275200|TAAR8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402099609375	2	560.307875	1118.6012	-1.4186	-0.00079487	-3.4297	-0.0019217	-4.8483	-0.0027165	560.3041684637569	102.64	0.41438	102.78	102.57	102.98	0.13569					14	9	2	0	0	0	0.20789	1	10735	10735		31.955	4.0726	1	56815	+		27959	20011	18752	18762	31768	31768					0.046640842798979065
LIEALAVES	9	Unmodified	_LIEALAVES_					0	0	0			REV__ENSG00000265203|ENST00000584701|RBP3	REV__ENSG00000265203|ENST00000584701|RBP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7666320800781	2	472.768583	943.522613	0.74188	0.00035074	-3.5197	-0.001664	-2.7778	-0.0013133	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.76996	1	8436	8436		33.516	1.5607	1	547170	+		27960	23958	18753	18763	31769	31769					0.048592319748081536
LIEDIIVPT	9	Unmodified	_LIEDIIVPT_					0	0	0			REV__ENSG00000088325|ENST00000300403|TPX2	REV__ENSG00000088325|ENST00000300403|TPX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8001708984375	2	506.799883	1011.58521	-0.048814	-2.4739E-05	2.2782	0.0011546	2.2294	0.0011298	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.77546	1	3273	3273		31.955	6.5047	1	475290	+		27961	15770	18754	18764	31770	31770					0.07988378043000921
LIEELIAKSK	10	Unmodified	_LIEELIAKSK_					0	0	0		nc|ENSG00000087269|P78316-2|NOP14;ENSG00000087269|ENST00000416614|NOP14	nc|ENSG00000087269|P78316-2|NOP14	nc|ENSG00000087269|P78316-2|NOP14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.28173828125	2	572.352814	1142.69108	0.4573	0.00026174	2.3451	0.0013422	2.8024	0.001604	572.353364445746	63.664	0.29644	64.219	64.003	64.3	0.55449					8	6	2	0	0	0	0.37624	1	6882	6882		14.137	0	1	51532			27962	1574	18755	18765	31771	31771					0.12543713888476304
LIEENDKY	8	Unmodified	_LIEENDKY_					0	0	0		ENSG00000164304|ENST00000502583|CAGE1	ENSG00000164304|ENST00000502583|CAGE1	ENSG00000164304|ENST00000502583|CAGE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2529907226562	2	512.253297	1022.49204	-0.40094	-0.00020538	1.3932	0.00071366	0.99223	0.00050827	512.253883322564	54.419	1.295	54.474	54.011	55.305	0.055614					87	42	3	0	0	0	0.884	1	4535	4535		33.516	0.70317	1	718970			27963	5949	18756	18766	31772	31772					-0.01830546410246825
LIEETISIAM	10	Unmodified	_LIEETISIAM_					0	0	0		nc|ENSG00000108587|O95249-2|GOSR1;ENSG00000108587|ENST00000451249|GOSR1;nc|ENSG00000108587|O95249|GOSR1;ENST00000427274.6_1_17:28822526-28847071:+|nuORF	nc|ENSG00000108587|O95249-2|GOSR1	nc|ENSG00000108587|O95249-2|GOSR1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3400268554688	2	560.301933	1118.58931	0.8614	0.00048265	0.48057	0.00026926	1.342	0.00075191	560.3025077907214	102.03	0.59013	102.17	101.98	102.57	0.13523					21	14	2	0	0	0	0.37624	1	10703	10703		45.952	10.334	1	397840			27964	2420	18757	18767	31773	31773					0.034760994744146956
LIEETPVL	8	Unmodified	_LIEETPVL_					0	0	0			REV__ENSG00000076356|ENST00000367033|PLXNA2	REV__ENSG00000076356|ENST00000367033|PLXNA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2634582519531	2	457.265676	912.516799	-1.2803	-0.00058543	-1.5058	-0.00068854	-2.7861	-0.001274	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.87276	1	7309	7309		29.842	3.0454	1	812040	+		27965	16725	18758	18768	31774	31774					0.05704133463132166
LIEEWQYFYPM	11	Unmodified	_LIEEWQYFYPM_					0	0	0		ENSG00000123066|ENST00000281928|MED13L	ENSG00000123066|ENST00000281928|MED13L	ENSG00000123066|ENST00000281928|MED13L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.25	3	506.903973	1517.69009	-0.13001	-6.5905E-05	-3.5	-0.0017742	-3.63	-0.0018401	506.90220235956883	49.593	0.53048	50.053	49.748	50.278	0.45983					18	12	2	0	0	0	0.18028	1	4808	4808		20.03	9.4437	1	453640			27966	3258	18759	18769	31775	31775					-0.04804868542737495
LIEFIHKMQH	10	Unmodified	_LIEFIHKMQH_					0	0	0			REV__ENSG00000182050|ENST00000611864|MGAT4C	REV__ENSG00000182050|ENST00000611864|MGAT4C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5977783203125	3	432.569147	1294.68561	-1.8326	-0.00079273	0.060153	2.602E-05	-1.7725	-0.00076671	432.56924433723015	106.17	0.31934	106.23	105.98	106.3	0.053757					9	7	2	0	0	0	0.37624	1	11264	11264		22.58	3.317	1	62340	+		27967	22495	18760	18770	31776	31776					0.05005711825015169
LIEIAKVP	8	Unmodified	_LIEIAKVP_					0	0	0		chr2:27104377-27110622|48|12.58|0.61|4.37|-|2|TE_info:L1MEd,L1MEd_dup2077,L1,LINE,donor,+,27110622,27110684|CGREF1,None|1	chr2:27104377-27110622|48|12.58|0.61|4.37|-|2|TE_info:L1MEd,L1MEd_dup2077,L1,LINE,donor,+,27110622,27110684|CGREF1,None|1	chr2:27104377-27110622|48|12.58|0.61|4.37|-|2|TE_info:L1MEd,L1MEd_dup2077,L1,LINE,donor,+,27110622,27110684|CGREF1,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7872009277344	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.82464	1	2866	2866		21.702	2.3424	1	10215000			27968	331	18761	18771	31777	31777					0.11308733942325944
LIEILIILGV	10	Unmodified	_LIEILIILGV_					0	0	0		nc|ENSG00000101251|Q5TEA6-2|SEL1L2;ENSG00000101251|ENST00000284951|SEL1L2	nc|ENSG00000101251|Q5TEA6-2|SEL1L2	nc|ENSG00000101251|Q5TEA6-2|SEL1L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3753662109375	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.85939	1	2511	2511		23.042	10.836	1	314410			27969	1921	18762	18772	31778	31778					0.18790680278902983
LIEKKEKYFR	10	Unmodified	_LIEKKEKYFR_					0	0	0			REV__ENSG00000145721|ENST00000274382|LIX1	REV__ENSG00000145721|ENST00000274382|LIX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9327697753906	3	451.934484	1352.78162	-1.7713	-0.0008005	-2.1778	-0.00098423	-3.9491	-0.0017847	451.93340802352935	100.57	2.3737	100.74	99.884	102.26	0.17199					164	56	4	0	0	0	0.86621	1	10460	10460		26.063	2.6855	1	618930	+		27970	19960	18763	18773	31779	31779					0.11934182936715843
LIEKKRLNR	9	Unmodified	_LIEKKRLNR_					0	0	0		ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP	ENSG00000163798|ENST00000326019|SLC4A1AP	ENSG00000163798|ENST00000326019|SLC4A1AP	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	585.3099365234375	2	585.377489	1168.74043	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.807	1	61.837	61.337	62.337	0.029575								0	0	0	0.28386	1	5762	5762		37.159	2.9866	1				27971	5866	18764	18774	31780	31780					0.1628046668793104
LIELAIGN	8	Unmodified	_LIELAIGN_					0	0	0			REV__nc|ENSG00000268500|O15389|SIGLEC5	REV__nc|ENSG00000268500|O15389|SIGLEC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.751708984375	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.81548	1	7314	7314		20.482	1.1219	1	423780	+		27972	30258	18765	18775	31781	31781					0.06383284011531032
LIELDVRRLRM	11	Unmodified	_LIELDVRRLRM_					0	0	0			REV__ENST00000477230.1_1_10:92912880-92913003:-|nuORF	REV__ENST00000477230.1_1_10:92912880-92913003:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.9514465332031	3	471.950139	1412.82859	3.4182	0.0016132	-0.14697	-6.9363E-05	3.2713	0.0015439	471.95004401513967	105.96	1.221	106.15	105.65	106.87	0.18647					86	48	3	0	0	0	0.76579	1	12939	12939		18.531	0.19939	1	219940	+		27973	27353	18766	18776	31782	31782					0.13868719216225145
LIELEYCN	8	Unmodified	_LIELEYCN_					0	0	0		ENSG00000119638|ENST00000238616|NEK9;ENST00000556170.5_1_14:75573136-75593624:-|nuORF	ENSG00000119638|ENST00000238616|NEK9	ENSG00000119638|ENST00000238616|NEK9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.8442687988281	2	498.738968	995.463383	-1.4244	-0.00071039	-0.82475	-0.00041133	-2.2491	-0.0011217	498.73886461050324	48.422	0.24632	48.891	48.788	49.035	0.46941					6	5	2	0	0	0	0.4196	1	4652	4652		24.203	7.7296	1	95783			27974	3081	18767	18777	31783	31783					-0.034529873110273
LIEPQIRRPRS	11	Unmodified	_LIEPQIRRPRS_					0	0	0		nc|ENSG00000049759|Q96PU5-9|NEDD4L;nc|ENSG00000049759|Q96PU5-4|NEDD4L;nc|ENSG00000049759|Q96PU5-2|NEDD4L;nc|ENSG00000049759|Q96PU5-6|NEDD4L;nc|ENSG00000049759|Q96PU5-5|NEDD4L;nc|ENSG00000049759|Q96PU5-7|NEDD4L;ENSG00000049759|ENST00000400345|NEDD4L	nc|ENSG00000049759|Q96PU5-9|NEDD4L	nc|ENSG00000049759|Q96PU5-9|NEDD4L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.608642578125	3	455.608882	1363.80482	-0.55128	-0.00025117	-0.41199	-0.00018771	-0.96328	-0.00043888	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.69687	1	7084	7084		32.034	0.39986	1	1732400			27975	988	18768	18778	31784	31784					0.13746621774066625
LIEPQIRRPRS	11	Unmodified	_LIEPQIRRPRS_					0	0	0		nc|ENSG00000049759|Q96PU5-9|NEDD4L;nc|ENSG00000049759|Q96PU5-4|NEDD4L;nc|ENSG00000049759|Q96PU5-2|NEDD4L;nc|ENSG00000049759|Q96PU5-6|NEDD4L;nc|ENSG00000049759|Q96PU5-5|NEDD4L;nc|ENSG00000049759|Q96PU5-7|NEDD4L;ENSG00000049759|ENST00000400345|NEDD4L	nc|ENSG00000049759|Q96PU5-9|NEDD4L	nc|ENSG00000049759|Q96PU5-9|NEDD4L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6090087890625	3	455.608882	1363.80482	-0.02024	-9.2214E-06	-1.0093	-0.00045987	-1.0296	-0.00046909	455.608304720296	65.806	3.5163	66.359	63.877	67.393	0.5526					173	94	4	0	0	0	0.71207	1	6989	6989		29.551	2.801	1	1863500			27976	988	18768	18778	31785	31785					0.13746621774066625
LIEQAKQEV	9	Unmodified	_LIEQAKQEV_					0	0	0			REV__nc|ENSG00000171551|O95672-2|ECEL1	REV__nc|ENSG00000171551|O95672-2|ECEL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.3002319335938	2	529.298039	1056.58152	-0.42214	-0.00022344	4.0479	0.0021425	3.6257	0.0019191	529.2999611674875	58.584	1.1615	58.977	58.566	59.728	0.39209					60	27	3	0	0	0	0.38563	1	6116	6116		58.782	4.0056	1	1279600	+		27977	21747	18769	18779	31786	31786					0.0554970826913177
LIERGEHTISK	11	Unmodified	_LIERGEHTISK_					0	0	0			REV__nc|ENSG00000006744|Q9BQ52-4|ELAC2	REV__nc|ENSG00000006744|Q9BQ52-4|ELAC2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.859130859375	2	641.859326	1281.7041	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.08	1	119.17	118.67	119.67	0.087753								0	0	0	0.56276	1	12537	12537		42.864	5.0528	1		+		27978	16112	18770	18780	31787	31787					0.07451545000549231
LIESGVHGALL	11	Unmodified	_LIESGVHGALL_					0	0	0		ENST00000526262.5_1_11:70189825-70228249:+|nuORF;ENST00000532504.5_1_11:70185286-70228249:+|nuORF;nc|ENSG00000131626|Q13136-2|PPFIA1;ENSG00000131626|ENST00000253925|PPFIA1;ENST00000531657.1_1_11:70218293-70228249:+|nuORF	ENST00000526262.5_1_11:70189825-70228249:+|nuORF	ENST00000526262.5_1_11:70189825-70228249:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.821533203125	2	554.821681	1107.62881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.87	1	116.8	116.3	117.3	-0.074318								0	0	0	0.56276	1	12543	12543		24.203	3.2558	1				27979	3739	18771	18781	31788	31788					0.07929987540137517
LIESNDLLLR	10	Unmodified	_LIESNDLLLR_					0	0	0			REV__ENSG00000175518|ENST00000380184|UBQLNL	REV__ENSG00000175518|ENST00000380184|UBQLNL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.3448486328125	2	593.34552	1184.67649	0.89398	0.00053044	-2.6243	-0.0015571	-1.7303	-0.0010267	593.3438403936742	103.36	2.3929	103.49	103.05	105.45	0.12621					170	59	5	0	0	0	0.86348	1	10898	10898		31.53	2.3598	1	4092800	+		27980	22071	18772	18782	31789	31789					0.09153641740317653
LIESRIHRLA	10	Unmodified	_LIESRIHRLA_					0	0	0		ENSG00000110700|ENST00000525634|RPS13;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000531908.5_1_11:17095982-17097186:-|nuORF	ENSG00000110700|ENST00000525634|RPS13	ENSG00000110700|ENST00000525634|RPS13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2469177246094	3	403.247173	1206.71969	-1.9293	-0.00077799	1.1746	0.00047366	-0.7547	-0.00030433	403.24758115209465	104.53	3.0767	104.62	103.79	106.87	0.093857					248	75	5	0	0	0	0.85958	1	11136	11136		20.837	7.3292	1	9819800			27981	2535	18773	18783	31790	31790					0.12459876308275852
LIETDTLRHH	10	Unmodified	_LIETDTLRHH_					0	0	0			REV__ENST00000551692.5_1_14:105849190-105849851:+|nuORF	REV__ENST00000551692.5_1_14:105849190-105849851:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	617.8275146484375	2	617.830569	1233.64658	-0.88037	-0.00054392	-4.4311	-0.0027377	-5.3115	-0.0032816	617.8276755186397	78.068	0.53952	78.163	77.936	78.476	0.0942					36	18	3	0	0	0	0.86763	1	7323	7323		26.693	3.1702	1	181820	+		27982	28610	18774	18784	31791	31791					0.03910702794973986
LIEVKQQTY	9	Unmodified	_LIEVKQQTY_					0	0	0			REV__nc|ENSG00000162441|Q8WZA0-2|LZIC	REV__nc|ENSG00000162441|Q8WZA0-2|LZIC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.313720703125	2	561.313689	1120.61282	0.64954	0.00036459	-3.5472	-0.0019911	-2.8976	-0.0016265	561.3111530718345	55.875	0.60942	56.276	55.866	56.475	0.40102					24	15	2	0	0	0	0.67345	1	5756	5756		42.396	2.338	1	1178600	+		27983	29974	18775	18785	31792	31792					0.05734281303261923
LIFATAVV	8	Unmodified	_LIFATAVV_					0	0	0		ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.25653076171875	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.87276	1	616	616		29.842	8.1392	1	817900			27984	7925	18776	18786	31793	31793					0.08288775879509558
LIFCVMFSSY	10	Unmodified	_LIFCVMFSSY_					0	0	0			REV__ENSG00000063127|ENST00000335875|SLC6A16	REV__ENSG00000063127|ENST00000335875|SLC6A16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.2857055664062	2	605.287771	1208.56099	0.52216	0.00031606	-3.2337	-0.0019573	-2.7115	-0.0016412	605.2854781639707	58.165	1.929	58.276	57.865	59.794	0.11027					166	76	4	0	0	0	0.51302	3	4969	4960;4969;4985		42.474	15.427	1	1588900	+		27985	16468	18777	18787	31794;31795;31796	31795					-0.03494921706533205
LIFCVMFSSY	10	Unmodified	_LIFCVMFSSY_					0	0	0			REV__ENSG00000063127|ENST00000335875|SLC6A16	REV__ENSG00000063127|ENST00000335875|SLC6A16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.2859497070312	2	605.287771	1208.56099	-0.21892	-0.00013251	-2.8755	-0.0017405	-3.0944	-0.001873	605.285887959875	58.271	1.5426	58.263	57.785	59.328	-0.0074387					123	65	2	0	0	0	0.67571	2	4927	4927;4999		25.45	7.1881	1	1563500	+		27986	16468	18777	18787	31797;31798	31797					-0.03494921706533205
LIFETLVTK	9	Unmodified	_LIFETLVTK_					0	0	0			REV__ENSG00000179615|ENST00000641114|OR2AP1	REV__ENSG00000179615|ENST00000641114|OR2AP1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.32275390625	2	532.323525	1062.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.607	1	46.593	46.093	47.093	-0.013821								0	0	0	0.32159	1	3747	3747		23.042	1.0826	1		+		27987	22346	18778	18788	31799	31799					0.10368657313983931
LIFFSVGLF	9	Unmodified	_LIFFSVGLF_					0	0	0			REV__nc|ENSG00000163399|P05023-3|ATP1A1	REV__nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	521.8001098632812	2	521.802229	1041.5899	0.36603	0.00019099	-4.192	-0.0021874	-3.826	-0.0019964	521.7998993312532	77.521	0.82666	77.471	77.244	78.071	-0.050789					80	35	3	0	0	0	0.32449	1	7703	7703		62.978	10.679	1	566060	+		27988	20912	18779	18789	31800	31800					0.07077306976430009
LIFHLVKVALL	11	Unmodified	_LIFHLVKVALL_					0	0	0		nc|ENSG00000099331|Q13459-2|MYO9B;ENSG00000099331|ENST00000682292|MYO9B	nc|ENSG00000099331|Q13459-2|MYO9B	nc|ENSG00000099331|Q13459-2|MYO9B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.3687744140625	2	633.420834	1264.82712	-0.15177	-9.6136E-05	-0.55492	-0.0003515	-0.70669	-0.00044763	633.4205920409921	97.936	0.25739	97.993	97.88	98.138	0.056839					6	5	2	0	0	0	0.17529	1	10330	10330		26.693	18.458	1	48020			27989	1757	18780	18790	31801	31801					0.20529453189783453
LIFIILTKR	9	Unmodified	_LIFIILTKR_					0	0	0		ENSG00000221996|ENST00000624801|OR52B4	ENSG00000221996|ENST00000624801|OR52B4	ENSG00000221996|ENST00000624801|OR52B4	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	558.820556640625	2	558.878802	1115.74305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.47	1	116.56	116.06	117.06	0.090004								0	0	0	0.36191	1	12370	12370		7.1934	0	1				27990	8695	18781	18791	31802	31802					0.18980922092896435
LIFIKKKRDS	10	Unmodified	_LIFIKKKRDS_					0	0	0		ENSG00000184363|ENST00000331563|PKP3;nc|ENSG00000184363|Q9Y446-2|PKP3	ENSG00000184363|ENST00000331563|PKP3	ENSG00000184363|ENST00000331563|PKP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.60107421875	3	416.599324	1246.77614	0.92013	0.00038332	2.5913	0.0010795	3.5115	0.0014629	416.60033448653934	76.634	0.5529	77.034	76.742	77.295	0.39969					39	18	3	0	0	0	0.73395	1	8697	8697		42.864	7.7122	1	706530			27991	7603	18782	18792	31803	31803					0.16262504144924605
LIFKAFLLK	9	Unmodified	_LIFKAFLLK_					0	0	0		ENSG00000131620|ENST00000355303|ANO1;nc|ENSG00000131620|Q5XXA6-5|ANO1;nc|ENSG00000131620|Q5XXA6-3|ANO1;nc|ENSG00000131620|Q5XXA6-2|ANO1;nc|ENSG00000131620|Q5XXA6-4|ANO1	ENSG00000131620|ENST00000355303|ANO1	ENSG00000131620|ENST00000355303|ANO1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.8399658203125	2	546.862621	1091.71069	0.19495	0.00010661	0.54947	0.00030049	0.74442	0.0004071	546.863432497004	101.24	0.20074	101.45	101.28	101.48	0.2058					7	4	2	0	0	0	0.20789	1	10609	10609		18.324	3.6603	1	75032			27992	3738	18783	18793	31804	31804					0.16850134689889273
LIFKGIQGSN	10	Unmodified	_LIFKGIQGSN_					0	0	0		nc|ENSG00000146839|Q9Y493-5|ZAN;nc|ENSG00000146839|Q9Y493-4|ZAN;nc|ENSG00000146839|Q9Y493-3|ZAN;nc|ENSG00000146839|Q9Y493-6|ZAN;nc|ENSG00000146839|Q9Y493-2|ZAN;ENSG00000146839|ENST00000613979|ZAN;nc|ENSG00000146839|Q9Y493-7|ZAN	nc|ENSG00000146839|Q9Y493-5|ZAN	nc|ENSG00000146839|Q9Y493-5|ZAN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8074340820312	2	538.808574	1075.60259	0.76947	0.00041459	-4.1632	-0.0022432	-3.3937	-0.0018286	538.8063188989221	90.224	2.4498	90.675	89.776	92.226	0.45058					128	61	3	0	0	0	0.86587	1	10683	10683		29.17	1.2878	1	1077300			27993	4863	18784	18794	31805	31805					0.06781718368665679
LIFKQLPKKLY	11	Unmodified	_LIFKQLPKKLY_					0	0	0		nc|ENSG00000164823|Q9Y236|OSGIN2;ENSG00000164823|ENST00000451899|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2992248535156	3	464.298874	1389.87479	0.76799	0.00035658	0.28265	0.00013123	1.0506	0.00048781	464.2989216647229	106.88	1.2384	106.98	106.64	107.88	0.091255					86	29	4	0	0	0	0.76892	1	11462	11462		17.833	3.7471	1	1622100			27994	6007	18785	18795	31806	31806					0.19545107390013072
LIFKQLPKKLY	11	Unmodified	_LIFKQLPKKLY_					0	0	0		nc|ENSG00000164823|Q9Y236|OSGIN2;ENSG00000164823|ENST00000451899|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	464.298874	1389.87479	-0.11954	-5.5501E-05	1.3317	0.00061831	1.2122	0.00056281	464.299366213752	107.31	0.78761	107.27	107.04	107.82	-0.034409	0.15116	0.00067816	NaN	17.833	36	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299100			27995	6007	18785	18795							0.19545107390013072
LIFKQLPKKLY	11	Unmodified	_LIFKQLPKKLY_					0	0	0		nc|ENSG00000164823|Q9Y236|OSGIN2;ENSG00000164823|ENST00000451899|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	464.298874	1389.87479	2.785	0.0012931	-1.4712	-0.00068307	1.3138	0.00061	464.29811341812496	107.34	0.83778	107.31	106.97	107.81	-0.034134	0.18628	-0.003226	NaN	17.833	40	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	231660			27996	6007	18785	18795							0.19545107390013072
LIFKQLPKKLY	11	Unmodified	_LIFKQLPKKLY_					0	0	0		nc|ENSG00000164823|Q9Y236|OSGIN2;ENSG00000164823|ENST00000451899|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	464.298874	1389.87479	0.46408	0.00021547	0.86257	0.00040049	1.3267	0.00061596	464.29915108344113	107.18	0.84114	107.22	106.85	107.69	0.035614	0.099801	2.4714E-05	NaN	17.833	40	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	228010			27997	6007	18785	18795							0.19545107390013072
LIFKQLPKKLY	11	Unmodified	_LIFKQLPKKLY_					0	0	0		nc|ENSG00000164823|Q9Y236|OSGIN2;ENSG00000164823|ENST00000451899|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	464.298874	1389.87479	-1.0254	-0.00047608	1.8439	0.00085613	0.81855	0.00038005	464.2996576393876	106.79	1.1419	106.94	106.56	107.7	0.14843	-0.18365	0.0013916	NaN	17.833	76	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	884310			27998	6007	18785	18795							0.19545107390013072
LIFKQLPKKLY	11	Unmodified	_LIFKQLPKKLY_					0	0	0		nc|ENSG00000164823|Q9Y236|OSGIN2;ENSG00000164823|ENST00000451899|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	nc|ENSG00000164823|Q9Y236|OSGIN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	464.298874	1389.87479	-1.7312	-0.00080381	2.763	0.0012829	1.0318	0.00047905	464.30007379201936	106.96	1.0796	107.01	106.65	107.73	0.053749	-0.10886	0.0026718	NaN	17.833	61	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	477610			27999	6007	18785	18795							0.19545107390013072
LIFLYIYT	8	Unmodified	_LIFLYIYT_					0	0	0			REV__ENST00000531971.1_1_11:118656990-118657077:-|nuORF	REV__ENST00000531971.1_1_11:118656990-118657077:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3043212890625	2	523.302062	1044.58957	-1.0824	-0.0005664	4.0253	0.0021064	2.9429	0.00154	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.90024	1	10825	10825		39.021	4.849	1	13160000	+		28000	28315	18786	18796	31807	31807					0.06905887256561982
LIFPTVAPR	9	Unmodified	_LIFPTVAPR_					0	0	0			REV__ENST00000336314.8_2_5:154194694-154195063:+|nuORF	REV__ENST00000336314.8_2_5:154194694-154195063:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.313232421875	2	507.310752	1012.60695	0.6361	0.0003227	2.454	0.0012449	3.0901	0.0015676	507.3117898295914	61.506	1.0937	62.06	61.596	62.689	0.55386					78	26	4	0	0	0	0.10807	1	6621	6621		90.777	3.8421	1	2300400	+		28001	25187	18787	18797	31808	31808					0.10115227582230091
LIFQITPLNV	10	Unmodified	_LIFQITPLNV_					0	0	0		nc|ENSG00000174437|P16615-5|ATP2A2;nc|ENSG00000174437|P16615-2|ATP2A2;nc|ENSG00000174437|P16615-3|ATP2A2;nc|ENSG00000174437|P16615-4|ATP2A2;ENSG00000174437|ENST00000539276|ATP2A2;ENST00000313432.5_1_12:110783758-110784272:+|nuORF	nc|ENSG00000174437|P16615-5|ATP2A2	nc|ENSG00000174437|P16615-5|ATP2A2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	579.349365234375	2	579.350074	1156.6856	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.13	1	109.15	108.65	109.65	0.020561								0	0	0	0.45132	1	11651	11651		31.53	1.0262	1				28002	6932	18788	18798	31809	31809					0.11352035096660984
LIFTRLWI	8	Unmodified	_LIFTRLWI_					0	0	0		ENST00000472184.1_1_21:30378740-30380682:-|nuORF;ENSG00000156253|ENST00000493196|RWDD2B	ENST00000472184.1_1_21:30378740-30380682:-|nuORF	ENST00000472184.1_1_21:30378740-30380682:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.81689453125	2	531.328945	1060.64334	-1.513	-0.00080389	2.7279	0.0014494	1.2149	0.00064554	531.3287591842426	89.316	0.39131	89.489	89.299	89.69	0.17234					10	8	2	0	0	0	0.4196	1	8841	8841		30.504	14.03	1	31516			28003	5370	18789	18799	31810	31810					0.11544104478934969
LIFVYSIF	8	Unmodified	_LIFVYSIF_					0	0	0			REV__ENSG00000179055|ENST00000641530|OR13D1	REV__ENSG00000179055|ENST00000641530|OR13D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2898254394531	2	501.288954	1000.56336	1.074	0.0005384	2.2287	0.0011172	3.3027	0.0016556	501.2899614179589	99.045	1.3844	99.406	98.936	100.32	0.36136					73	34	3	0	0	0	0.87276	1	11940	11940		29.842	0	1	1114100	+		28004	22312	18790	18800	31811	31811					0.06309618085083457
LIFYVLFS	8	Unmodified	_LIFYVLFS_					0	0	0			REV__nc|ENSG00000205726|Q15811-5|ITSN1	REV__nc|ENSG00000205726|Q15811-5|ITSN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2906799316406	2	501.288954	1000.56336	-0.75978	-0.00038087	4.3039	0.0021575	3.5441	0.0017766	501.290862689854	99.716	1.5054	99.716	99.182	100.69	0					84	35	4	0	0	0	0.87276	1	10073	10073		29.842	1.9593	1	611590	+		28005	30173	18791	18801	31812	31812					0.06309618085083457
LIGAALLGIA	10	Unmodified	_LIGAALLGIA_					0	0	0			REV__ENSG00000216588|ENST00000402988|IGSF23	REV__ENSG00000216588|ENST00000402988|IGSF23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3009033203125	2	456.299853	910.585153	-0.84354	-0.00038491	3.2342	0.0014758	2.3906	0.0010908	456.30117331551685	46.601	1.8723	46.572	45.714	47.586	-0.028778					105	48	3	0	0	0	0.86786	1	3787	3787		26.796	7.4361	1	332630	+		28006	23695	18792	18802	31813	31813					0.12628422833643071
LIGAALQLL	9	Unmodified	_LIGAALQLL_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3013000488281	2	456.299853	910.585153	0.11809	5.3885E-05	2.2455	0.0010246	2.3636	0.0010785	456.3007564830729	46.759	1.8735	46.745	45.791	47.665	-0.013821					101	50	3	0	0	0	0.77546	1	3754	3754		31.955	5.1588	1	299420	+		28007	20607	18793	18803	31814	31814					0.1262842283365444
LIGAALQLL	9	Unmodified	_LIGAALQLL_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30108642578125	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.7932	1	2117	2117		26.796	0	1	1715600	+		28008	20607	18793	18803	31815	31815					0.1262842283365444
LIGAALQLL	9	Unmodified	_LIGAALQLL_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30023193359375	2	456.299853	910.585153	-1.2534	-0.00057195	2.4458	0.001116	1.1923	0.00054406	456.30078981863505	41.119	1.382	41.123	40.607	41.989	0.0043983					85	44	3	0	0	0	0.7932	1	2686	2686		26.796	0	1	328800	+		28009	20607	18793	18803	31816	31816					0.1262842283365444
LIGAALQLL	9	Unmodified	_LIGAALQLL_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30120849609375	2	456.299853	910.585153	-1.2496	-0.00057018	3.0457	0.0013898	1.7962	0.00081959	456.3011111940197	43.185	1.5794	43.191	42.556	44.136	0.0057487					96	41	4	0	0	0	0.76402	1	2973	2973		35.201	6.0512	1	673120	+		28010	20607	18793	18803	31817	31817					0.1262842283365444
LIGAALQLL	9	Unmodified	_LIGAALQLL_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3007507324219	2	456.299853	910.585153	-1.2401	-0.00056585	4.009	0.0018293	2.7689	0.0012635	456.30156916683757	47.995	1.2721	48.018	47.652	48.924	0.02227					72	35	3	0	0	0	0.7932	1	3725	3725		26.796	0	1	212280	+		28011	20607	18793	18803	31818	31818					0.1262842283365444
LIGAALQLL	9	Unmodified	_LIGAALQLL_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.2947082519531	2	456.299853	910.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.456	1	66.586	66.086	67.086	0.12996								0	0	0	0.31088	1	5897	5897		26.796	1.3459	1		+		28012	20607	18793	18803	31819	31819					0.1262842283365444
LIGAALQLL	9	Unmodified	_LIGAALQLL_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.301025390625	2	456.299853	910.585153	0.16746	7.6412E-05	2.7809	0.0012689	2.9484	0.0013454	456.30098393638264	34.91	1.4474	35.016	34.575	36.022	0.10603					127	53	3	0	0	0	0.7932	1	1835	1835		26.796	5.0938	1	751300	+		28013	20607	18793	18803	31820	31820					0.1262842283365444
LIGAALQLL	9	Unmodified	_LIGAALQLL_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.2996520996094	2	456.299853	910.585153	0.2216	0.00010112	0.88696	0.00040472	1.1086	0.00050584	456.3001222614761	40.857	1.8548	40.939	40.553	42.408	0.081345					89	55	2	0	0	0	0.76996	1	2673	2673		33.516	5.2613	1	381800	+		28014	20607	18793	18803	31821	31821					0.1262842283365444
LIGAALQLL	9	Unmodified	_LIGAALQLL_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3018798828125	2	456.299853	910.585153	0.23964	0.00010935	1.5979	0.00072912	1.8375	0.00083847	456.3004567864084	43.097	2.576	43.154	41.691	44.267	0.056747					113	66	3	0	0	0	0.7932	1	2974	2974		25.45	0.94616	1	821670	+		28015	20607	18793	18803	31822	31822					0.1262842283365444
LIGAALQLL	9	Unmodified	_LIGAALQLL_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30108642578125	2	456.299853	910.585153	1.12	0.00051105	1.6845	0.00076862	2.8045	0.0012797	456.3004764571391	34.144	1.6348	34.449	34.076	35.711	0.30495					98	40	4	0	0	0	0.5393	1	2534	2534		50.025	2.1089	1	1747200	+		28016	20607	18793	18803	31823	31823					0.1262842283365444
LIGAALQLL	9	Unmodified	_LIGAALQLL_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30072021484375	2	456.299853	910.585153	-1.6788	-0.00076604	2.8954	0.0013212	1.2166	0.00055514	456.3009473461045	41.485	1.1953	42.119	41.391	42.586	0.6339					70	32	4	0	0	0	0.69914	1	3652	3652		40.573	11.423	1	3839000	+		28017	20607	18793	18803	31824	31824					0.1262842283365444
LIGAIVLGG	9	Unmodified	_LIGAIVLGG_					0	0	0			REV__chr19:35140629-35141149|16|17.31|0.0|20.72|+|0|FXYD1,None|1	REV__chr19:35140629-35141149|16|17.31|0.0|20.72|+|0|FXYD1,None|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.785400390625	2	406.765646	811.516739	-0.34232	-0.00013925	1.4799	0.00060196	1.1375	0.00046271	406.7662913220019	29.734	0.1383	29.691	29.589	29.728	-0.043095					4	2	2	0	0	0	0.20789	1	1568	1568		21.702	0	1	6614.1	+		28018	15697	18794	18804	31825	31825					0.10344178253808423
LIGALLYA	8	Unmodified	_LIGALLYA_					0	0	0			REV__ENSG00000133302|ENST00000265140|SLF1	REV__ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2584228515625	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.80127	1	535	535		16.705	0	1	679020	+		28019	19070	18795	18805	31826	31826					0.08288775879509558
LIGAMIVY	8	Unmodified	_LIGAMIVY_					0	0	0		nc|ENSG00000177058|Q8NBW4-4|SLC38A9;nc|ENSG00000177058|Q8NBW4-3|SLC38A9;ENSG00000177058|ENST00000396865|SLC38A9;ENST00000507447.1_1_5:54960464-54965471:-|nuORF;ENST00000515159.5_1_5:54931266-54960686:-|nuORF;nc|ENSG00000177058|Q8NBW4-2|SLC38A9	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.25592041015625	2	440.254057	878.493561	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.847	1	60.814	60.314	61.314	-0.032509								0	0	0	0.3048	1	5757	5757		43.626	0	1				28020	7116	18796	18806	31827	31827					0.049454161448238665
LIGAVAPIA	9	Unmodified	_LIGAVAPIA_					0	0	0			REV__ENST00000523468.5_1_6:157963626-158049550:+|nuORF	REV__ENST00000523468.5_1_6:157963626-158049550:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.26629638671875	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.78292	1	2775	2775		29.842	0	1	681490	+		28021	22034	18797	18807	31828	31828					0.0979217825380374
LIGAVAPIA	9	Unmodified	_LIGAVAPIA_					0	0	0			REV__ENST00000523468.5_1_6:157963626-158049550:+|nuORF	REV__ENST00000523468.5_1_6:157963626-158049550:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7673034667969	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.7932	1	2852	2852		21.702	0	1	818920	+		28022	22034	18797	18807	31829	31829					0.0979217825380374
LIGEELQV	8	Unmodified	_LIGEELQV_					0	0	0		ENST00000492690.1_1_3:12650263-12653498:-|nuORF;ENSG00000132155|ENST00000251849|RAF1;nc|ENSG00000132155|P04049-2|RAF1	ENST00000492690.1_1_3:12650263-12653498:-|nuORF	ENST00000492690.1_1_3:12650263-12653498:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.755859375	2	450.755475	899.496398	-1.4711	-0.00066312	-1.5388	-0.00069364	-3.01	-0.0013568	450.7547246648738	79.827	2.1578	79.926	78.179	80.337	0.098701					99	70	2	0	0	0	0.9295	1	7516	7516		55.504	0.60963	1	155440			28023	3767	18798	18808	31830	31830					0.042629628033296285
LIGEGKTDYQ	10	Unmodified	_LIGEGKTDYQ_					0	0	0			REV__ENSG00000144028|ENST00000323853|SNRNP200	REV__ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.2857055664062	2	562.285128	1122.5557	0.51675	0.00029056	-0.84848	-0.00047709	-0.33174	-0.00018653	562.284398654235	50.369	0.61137	50.373	50.078	50.689	0.0045319					29	13	3	0	0	0	0.70553	1	4315	4315		44.377	6.5657	1	188800	+		28024	19864	18799	18809	31831	31831					-0.0006718597314829822
LIGEKIVP	8	Unmodified	_LIGEKIVP_					0	0	0			REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.779541015625	2	434.778754	867.542954	0.20501	8.9135E-05	2.1081	0.00091654	2.3131	0.0010057	434.77952396468385	43.343	2.099	43.316	42.291	44.39	-0.026768					151	50	4	0	0	0	0.88915	1	3229	3229		35.201	3.2459	1	2133200	+		28025	21044	18800	18810	31832	31832					0.10388447425282266
LIGEKIVP	8	Unmodified	_LIGEKIVP_					0	0	0			REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	2	434.778754	867.542954	0.023581	1.0252E-05	2.6379	0.0011469	2.6615	0.0011571	434.7797629333649	48.108	2.6391	48.098	47.574	50.213	-0.0093269					205	68	4	0	0	0	0.90465	1	3890	3890		40.573	3.4135	1	2315200	+		28026	21044	18800	18810	31833	31833					0.10388447425282266
LIGEKIVP	8	Unmodified	_LIGEKIVP_					0	0	0			REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77801513671875	2	434.778754	867.542954	-0.97237	-0.00042277	4.234	0.0018408	3.2616	0.0014181	434.7805193577322	37.104	1.6925	37.05	36.066	37.758	-0.053555					155	37	5	0	0	0	0.87922	1	2395	2395		31.955	2.8053	1	5510500	+		28027	21044	18800	18810	31834	31834					0.10388447425282266
LIGEKIVP	8	Unmodified	_LIGEKIVP_					0	0	0			REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7799987792969	2	434.778754	867.542954	-1.2494	-0.00054321	3.5325	0.0015359	2.2831	0.00099266	434.7801616022163	41.477	1.7868	41.436	40.922	42.709	-0.04081					147	45	4	0	0	0	0.88915	1	3248	3248		35.201	3.2459	1	2800900	+		28028	21044	18800	18810	31835	31835					0.10388447425282266
LIGEKIVP	8	Unmodified	_LIGEKIVP_					0	0	0			REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7794189453125	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.86288	2	3024	2968;3024		40.573	5.3719	1	2766200	+		28029	21044	18800	18810	31836;31837	31837					0.10388447425282266
LIGEKIVP	8	Unmodified	_LIGEKIVP_					0	0	0			REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77984619140625	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.87922	1	2607	2607		31.955	2.8053	1	2513700	+		28030	21044	18800	18810	31838	31838					0.10388447425282266
LIGEKIVP	8	Unmodified	_LIGEKIVP_					0	0	0			REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7793273925781	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.86288	1	3747	3747		26.796	1.3459	1	2175000	+		28031	21044	18800	18810	31839	31839					0.10388447425282266
LIGEKIVP	8	Unmodified	_LIGEKIVP_					0	0	0			REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77813720703125	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.88915	1	3482	3482		35.201	1.6851	1	17256000	+		28032	21044	18800	18810	31840	31840					0.10388447425282266
LIGEKIVP	8	Unmodified	_LIGEKIVP_					0	0	0			REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77947998046875	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.86288	1	3741	3741		26.796	1.3459	1	6824500	+		28033	21044	18800	18810	31841	31841					0.10388447425282266
LIGEKIVP	8	Unmodified	_LIGEKIVP_					0	0	0			REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78009033203125	2	434.778754	867.542954	1.2416	0.00053983	1.4609	0.00063516	2.7025	0.001175	434.77928458805707	50.665	0.98352	51.416	51.08	52.063	0.75174					40	23	2	0	0	0	0.80706	1	5032	5032		19.36	1.0356	1	345360	+		28034	21044	18800	18810	31842	31842					0.10388447425282266
LIGFAGAPW	9	Unmodified	_LIGFAGAPW_					0	0	0		ENST00000494399.5_1_1:45478966-45479784:+|nuORF;ENSG00000126088|ENST00000246337|UROD	ENST00000494399.5_1_1:45478966-45479784:+|nuORF	ENST00000494399.5_1_1:45478966-45479784:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2522888183594	2	466.255446	930.496338	-0.11935	-5.5648E-05	-3.1837	-0.0014844	-3.3031	-0.0015401	466.25388962945533	65.711	0.99811	65.722	64.753	65.751	0.010445					55	40	2	0	0	0	0.72098	1	6133	6133		39.021	4.849	1	367120			28035	3441	18801	18811	31843	31843					0.028310075939884882
LIGFAGAPW	9	Unmodified	_LIGFAGAPW_					0	0	0		ENST00000494399.5_1_1:45478966-45479784:+|nuORF;ENSG00000126088|ENST00000246337|UROD	ENST00000494399.5_1_1:45478966-45479784:+|nuORF	ENST00000494399.5_1_1:45478966-45479784:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2536315917969	2	466.255446	930.496338	-1.3306	-0.0006204	-1.5296	-0.00071319	-2.8602	-0.0013336	466.2545972233514	62.853	1.2518	62.881	62.285	63.537	0.028133					98	59	2	0	0	0	0.78292	1	5875	5875		29.842	4.3914	1	139830			28036	3441	18801	18811	31844	31844					0.028310075939884882
LIGGFIATVV	10	Unmodified	_LIGGFIATVV_					0	0	0			REV__nc|ENSG00000140455|Q9Y6I4-2|USP3	REV__nc|ENSG00000140455|Q9Y6I4-2|USP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.8094177246094	2	495.305136	988.595718	-0.66585	-0.0003298	0.93457	0.0004629	0.26872	0.0001331	495.3054548955284	64.721	0.78749	65.107	64.732	65.519	0.38615					39	18	3	0	0	0	0.86305	1	6970	6970		31.955	5.1588	1	274140	+		28037	19617	18802	18812	31845	31845					0.10096405488093296
LIGGNKLP	8	Unmodified	_LIGGNKLP_					0	0	0			REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2574462890625	2	406.255446	810.496338	0.12581	5.111E-05	3.5587	0.0014458	3.6846	0.0014969	406.25676185595603	33.224	0.95024	33.334	33.07	34.021	0.10991					93	41	3	0	0	0	0.86288	1	1606	1606		26.796	5.0938	1	425420	+		28038	22578	18803	18813	31846	31846					0.08351007593978466
LIGGNKLP	8	Unmodified	_LIGGNKLP_					0	0	0			REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2578430175781	2	406.255446	810.496338	0.25887	0.00010517	4.1575	0.001689	4.4164	0.0017942	406.2570424536752	48.047	0.7146	48.085	47.766	48.48	0.037731					39	21	2	0	0	0	0.81548	1	3666	3666		20.482	1.1219	1	225620	+		28039	22578	18803	18813	31847	31847					0.08351007593978466
LIGGNKLP	8	Unmodified	_LIGGNKLP_					0	0	0			REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2568054199219	2	406.255446	810.496338	0.27279	0.00011082	3.6804	0.0014952	3.9532	0.001606	406.25677816056157	49.48	2.6493	49.522	48.485	51.134	0.042236					135	72	3	0	0	0	0.88915	1	3873	3873		35.201	1.6851	1	326490	+		28040	22578	18803	18813	31848	31848					0.08351007593978466
LIGGNKLP	8	Unmodified	_LIGGNKLP_					0	0	0			REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2572937011719	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.86791	1	3827	3827		28.254	0	1	334920	+		28041	22578	18803	18813	31849	31849					0.08351007593978466
LIGGNKLP	8	Unmodified	_LIGGNKLP_					0	0	0			REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2568664550781	2	406.255446	810.496338	0.76437	0.00031053	2.8391	0.0011534	3.6035	0.0014639	406.25649663672846	32.789	1.8077	33	32.465	34.272	0.21168					82	42	4	0	0	0	0.81548	1	2329	2329		20.482	0	1	751020	+		28042	22578	18803	18813	31850	31850					0.08351007593978466
LIGGNKLP	8	Unmodified	_LIGGNKLP_					0	0	0			REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.256591796875	2	406.255446	810.496338	-1.4166	-0.00057551	4.2472	0.0017255	2.8306	0.0011499	406.2570241315947	44.294	2.3011	45.138	43.653	45.954	0.84438					100	56	4	0	0	0	0.81724	1	4051	4051		14.664	0.88877	1	1167500	+		28043	22578	18803	18813	31851	31851					0.08351007593978466
LIGHISKKM	9	Unmodified	_LIGHISKKM_					0	0	0		ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087768554688	2	513.810062	1025.60557	-1.3833	-0.00071076	-0.62879	-0.00032308	-2.0121	-0.0010338	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.7932	1	4351	4351		24.203	0	1	1148600			28044	3392	18804	18814	31852	31852					0.09379270221802471
LIGHISKKM	9	Unmodified	_LIGHISKKM_					0	0	0		ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8082275390625	2	513.810062	1025.60557	0.35777	0.00018383	-2.489	-0.0012789	-2.1312	-0.001095	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.78536	1	3817	3817		29.15	3.6994	1	1443600			28045	3392	18804	18814	31853	31853					0.09379270221802471
LIGHPKIPH	9	Unmodified	_LIGHPKIPH_					0	0	0			REV__ENSG00000221890|ENST00000333039|NPTXR	REV__ENSG00000221890|ENST00000333039|NPTXR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3072204589844	2	506.308544	1010.60253	-1.5415	-0.00078047	1.3804	0.00069889	-0.16112	-8.1578E-05	506.3093285794098	44.216	2.5192	44.216	43.58	46.099	0					89	61	3	0	0	0	0.76996	1	3139	3139		33.516	3.674	1	527690	+		28046	23714	18805	18815	31854	31854					0.09765763159327889
LIGIAGIIAA	10	Unmodified	_LIGIAGIIAA_					0	0	0		nc|ENSG00000066405|P56856-2|CLDN18	nc|ENSG00000066405|P56856-2|CLDN18	nc|ENSG00000066405|P56856-2|CLDN18	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30133056640625	2	456.299853	910.585153	-1.6896	-0.00077098	4.4336	0.0020231	2.744	0.0012521	456.30174360814857	51.937	1.2506	51.937	51.624	52.874	0					54	32	2	0	0	0	0.86786	1	4226	4226		26.796	6.7993	1	89537			28047	14766	18806	18816	31855	31855					0.1262842283365444
LIGIFLTRSFV	11	Unmodified	_LIGIFLTRSFV_					0	0	0			REV__nc|ENSG00000166928|Q96JA4-5|MS4A14	REV__nc|ENSG00000166928|Q96JA4-5|MS4A14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.58154296875	3	422.592058	1264.75434	2.2101	0.00093399	-1.8581	-0.00078522	0.35204	0.00014877	422.59108535110073	97.908	0.21546	97.853	97.687	97.902	-0.055542					7	4	2	0	0	0	0.1767	1	10530	10530		13.508	0	1	31433	+		28048	30007	18807	18817	31856	31856					0.13255699396358978
LIGIIVANV	9	Unmodified	_LIGIIVANV_					0	0	0		ENSG00000075673|ENST00000381946|ATP12A;nc|ENSG00000075673|P54707-2|ATP12A;nc|ENSG00000163399|P05023-2|ATP1A1;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENSG00000075673|ENST00000381946|ATP12A;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30133056640625	2	456.299853	910.585153	-1.7707	-0.00080797	4.1491	0.0018932	2.3784	0.0010852	456.3016315256623	46.489	1.398	46.489	46.06	47.458	0					92	40	3	0	0	0	0.7932	1	3610	3610		20.482	1.1219	1	435240			28049	1340;2214;12263;5794;12564	18808	18818	31857	31857					0.1262842283365444
LIGIIVANV	9	Unmodified	_LIGIIVANV_					0	0	0		ENSG00000075673|ENST00000381946|ATP12A;nc|ENSG00000075673|P54707-2|ATP12A;nc|ENSG00000163399|P05023-2|ATP1A1;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENSG00000075673|ENST00000381946|ATP12A;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30108642578125	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.7932	1	2002	2002		20.482	1.1219	1	1057300			28050	1340;2214;12263;5794;12564	18808	18818	31858	31858					0.1262842283365444
LIGIIVANV	9	Unmodified	_LIGIIVANV_					0	0	0		ENSG00000075673|ENST00000381946|ATP12A;nc|ENSG00000075673|P54707-2|ATP12A;nc|ENSG00000163399|P05023-2|ATP1A1;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENSG00000075673|ENST00000381946|ATP12A;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3011474609375	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.78851	1	1975	1975		28.254	3.7503	1	1220600			28051	1340;2214;12263;5794;12564	18808	18818	31859	31859					0.1262842283365444
LIGIIVANV	9	Unmodified	_LIGIIVANV_					0	0	0		ENSG00000075673|ENST00000381946|ATP12A;nc|ENSG00000075673|P54707-2|ATP12A;nc|ENSG00000163399|P05023-2|ATP1A1;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENSG00000075673|ENST00000381946|ATP12A;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3017272949219	2	456.299853	910.585153	-0.75416	-0.00034412	3.5877	0.0016371	2.8336	0.001293	456.3012900851617	35.065	1.7041	35.071	34.727	36.431	0.0063934					112	39	4	0	0	0	0.77546	1	2265	2265		31.955	0	1	634200			28052	1340;2214;12263;5794;12564	18808	18818	31860	31860					0.1262842283365444
LIGIIVANV	9	Unmodified	_LIGIIVANV_					0	0	0		ENSG00000075673|ENST00000381946|ATP12A;nc|ENSG00000075673|P54707-2|ATP12A;nc|ENSG00000163399|P05023-2|ATP1A1;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENSG00000075673|ENST00000381946|ATP12A;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENST00000485672.2_1_19:42488766-42489464:-|nuORF	ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3009948730469	2	456.299853	910.585153	0.067738	3.0909E-05	2.1767	0.00099321	2.2444	0.0010241	456.3007392849424	46.706	1.5961	46.702	46.112	47.708	-0.0041618					92	43	3	0	0	0	0.76996	1	3774	3774		33.516	6.7195	1	327340			28053	1340;2214;12263;5794;12564	18808	18818	31861	31861					0.1262842283365444
LIGILDSSL	9	Unmodified	_LIGILDSSL_					0	0	0		nc|ENSG00000171804|Q6ZQQ6|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;ENSG00000171804|ENST00000447313|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.77752685546875	2	465.778951	929.543348	-0.1189	-5.538E-05	-2.6882	-0.0012521	-2.8071	-0.0013075	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.76996	1	7864	7864		33.516	0	1	345200			28054	6711	18809	18819	31862	31862					0.07575822354476713
LIGIMLGY	8	Unmodified	_LIGIMLGY_					0	0	0		ENSG00000152049|ENST00000281830|KCNE4;nc|ENSG00000152049|Q8WWG9|KCNE4	ENSG00000152049|ENST00000281830|KCNE4	ENSG00000152049|ENST00000281830|KCNE4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2558898925781	2	440.254057	878.493561	0.43969	0.00019357	2.6234	0.001155	3.0631	0.0013485	440.2550261626726	67.317	0.79267	67.444	67.122	67.915	0.12748					63	30	3	0	0	0	0.84567	1	6043	6043		24.504	0	1	418260			28055	5153	18810	18820	31863	31863					0.049454161448238665
LIGIVARFYGV	11	Unmodified	_LIGIVARFYGV_					0	0	0			REV__ENSG00000148606|ENST00000372371|POLR3A	REV__ENSG00000148606|ENST00000372371|POLR3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3661499023438	2	604.363516	1206.71248	3.2045	0.0019367	1.6316	0.00098609	4.8361	0.0029228	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.67762	1	11452	11452		40.778	9.2484	1	63446000	+		28056	20127	18811	18821	31864	31864					0.11739143707836774
LIGIVARFYGV	11	Unmodified	_LIGIVARFYGV_					0	0	0			REV__ENSG00000148606|ENST00000372371|POLR3A	REV__ENSG00000148606|ENST00000372371|POLR3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2469787597656	3	403.24477	1206.71248	2.718	0.001096	2.5029	0.0010093	5.2209	0.0021053	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.76251	1	11620	11620		19.263	7.056	1	15597000	+		28057	20127	18811	18821	31865	31865					0.11739143707836774
LIGIVARFYGV	11	Unmodified	_LIGIVARFYGV_					0	0	0			REV__ENSG00000148606|ENST00000372371|POLR3A	REV__ENSG00000148606|ENST00000372371|POLR3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3665771484375	2	604.363516	1206.71248	1.0484	0.00063359	3.8594	0.0023325	4.9078	0.0029661	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.71207	1	11313	11313		26.693	2.4902	1	105850000	+		28058	20127	18811	18821	31866	31866					0.11739143707836774
LIGIVLAET	9	Unmodified	_LIGIVLAET_					0	0	0			REV__ENSG00000165269|ENST00000297988|AQP7	REV__ENSG00000165269|ENST00000297988|AQP7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.79095458984375	2	464.789318	927.564084	-1.14	-0.00052988	4.1432	0.0019257	3.0031	0.0013958	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.78851	1	1716	1716		28.254	1.4582	1	286820	+		28059	21168	18812	18822	31867	31867					0.09740412734117854
LIGKGPAVI	9	Unmodified	_LIGKGPAVI_					0	0	0			REV__nc|ENSG00000149925|P04075|ALDOA	REV__nc|ENSG00000149925|P04075|ALDOA	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.77978515625	2	434.286746	866.558939	-1.8564	-0.00080619	3.9475	0.0017144	2.0912	0.00090818	434.28864322129226	41.546	1.3051	41.546	41.265	42.57	0					38	32	2	0	0	0	0.20789	1	2905	2905		19.36	0	1	80356	+		28060	20197	18813	18823	31868	31868					0.12032153662175915
LIGKGPAVI	9	Unmodified	_LIGKGPAVI_					0	0	0			REV__nc|ENSG00000149925|P04075|ALDOA	REV__nc|ENSG00000149925|P04075|ALDOA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7776184082031	2	434.286746	866.558939	0.14841	6.4454E-05	3.3211	0.0014423	3.4695	0.0015067	434.28809512116425	35.643	1.117	35.749	35.279	36.396	0.10603					80	35	3	0	0	0	0.20789	1	1931	1931		33.516	13.034	1	282940	+		28061	20197	18813	18823	31869	31869					0.12032153662175915
LIGKGPAVI	9	Unmodified	_LIGKGPAVI_					0	0	0			REV__nc|ENSG00000149925|P04075|ALDOA	REV__nc|ENSG00000149925|P04075|ALDOA	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.286746	866.558939	-1.942	-0.00084339	5.0005	0.0021717	3.0585	0.0013283	434.2888842477869	35.813	1.6645	35.813	35.29	36.955	0	0.012173	0.0011094	NaN	33.516	84	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338940	+		28062	20197	18813	18823							0.12032153662175915
LIGKGPAVI	9	Unmodified	_LIGKGPAVI_					0	0	0			REV__nc|ENSG00000149925|P04075|ALDOA	REV__nc|ENSG00000149925|P04075|ALDOA	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.286746	866.558939	-1.6602	-0.00072102	5.0342	0.0021863	3.3739	0.0014652	434.2888520805326	35.85	1.1387	35.882	35.333	36.472	0.031132	0.080988	0.0011387	NaN	33.516	70	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211820	+		28063	20197	18813	18823							0.12032153662175915
LIGKKEYKMSS	11	Unmodified	_LIGKKEYKMSS_					0	0	0		ENSG00000129534|ENST00000310806|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3631591796875	2	642.355031	1282.69551	7.1449	0.0045895	4.0225	0.0025839	11.167	0.0071734	642.3585751725324	110.49	1.1397	110.55	110.17	111.3	0.058884					162	41	4	0	0	0	0.60058	3	13389	13389;13450;13483		44.377	3.599	1	2259100			28064	3593	18814	18824	31870;31871;31872	31870					0.06546855039732691
LIGKKPIP	8	Unmodified	_LIGKKPIP_					0	0	0			REV__ENSG00000198934|ENST00000361470|MAGEE1	REV__ENSG00000198934|ENST00000361470|MAGEE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.2554931640625	2	433.297114	864.579674	-0.16835	-7.2945E-05	0.53337	0.00023111	0.36502	0.00015816	433.2977979540236	107.36	0.31908	107.33	107.21	107.53	-0.034401					13	7	2	0	0	0	0.4196	1	11667	11667		14.664	0	1	92876	+		28065	23422	18815	18825	31873	31873					0.14196744041839793
LIGKPDLL	8	Unmodified	_LIGKPDLL_					0	0	0			REV__ENSG00000180902|ENST00000321264|D2HGDH	REV__ENSG00000180902|ENST00000321264|D2HGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801818847656	2	434.778754	867.542954	-0.61894	-0.0002691	3.8256	0.0016633	3.2067	0.0013942	434.7803762451805	34.577	0.94073	34.521	33.912	34.853	-0.056381					81	20	5	0	0	0	0.86791	1	2198	2198		28.254	1.4582	1	3842800	+		28066	22424	18816	18826	31874	31874					0.10388447425293634
LIGKPDLL	8	Unmodified	_LIGKPDLL_					0	0	0			REV__ENSG00000180902|ENST00000321264|D2HGDH	REV__ENSG00000180902|ENST00000321264|D2HGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801208496094	2	434.778754	867.542954	1.0211	0.00044394	2.4757	0.0010764	3.4967	0.0015203	434.77962104590523	33.405	1.0416	33.404	32.826	33.868	-0.0016365					60	24	3	0	0	0	0.87479	1	1977	1977		30.504	5.0535	1	347080	+		28067	22424	18816	18826	31875	31875					0.10388447425293634
LIGKPDLL	8	Unmodified	_LIGKPDLL_					0	0	0			REV__ENSG00000180902|ENST00000321264|D2HGDH	REV__ENSG00000180902|ENST00000321264|D2HGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7794189453125	2	434.778754	867.542954	1.0906	0.00047416	1.4824	0.00064451	2.573	0.0011187	434.77927379886756	45.133	1.9101	45.129	44.288	46.198	-0.0041618					129	44	4	0	0	0	0.88915	1	3655	3655		35.201	1.0282	1	1333000	+		28068	22424	18816	18826	31876	31876					0.10388447425293634
LIGKPDLL	8	Unmodified	_LIGKPDLL_					0	0	0			REV__ENSG00000180902|ENST00000321264|D2HGDH	REV__ENSG00000180902|ENST00000321264|D2HGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7795715332031	2	434.778754	867.542954	0.67011	0.00029135	2.2738	0.00098859	2.9439	0.0012799	434.7797190459747	63.868	2.8603	63.895	62.469	65.329	0.027142					167	106	2	0	0	0	0.88915	1	5911	5911		35.201	6.9464	1	173910	+		28069	22424	18816	18826	31877	31877					0.10388447425293634
LIGKPDLL	8	Unmodified	_LIGKPDLL_					0	0	0			REV__ENSG00000180902|ENST00000321264|D2HGDH	REV__ENSG00000180902|ENST00000321264|D2HGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77886962890625	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.86791	1	3312	3312		28.254	0	1	1177900	+		28070	22424	18816	18826	31878	31878					0.10388447425293634
LIGKPDLL	8	Unmodified	_LIGKPDLL_					0	0	0			REV__ENSG00000180902|ENST00000321264|D2HGDH	REV__ENSG00000180902|ENST00000321264|D2HGDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7791442871094	2	434.778754	867.542954	-0.7455	-0.00032413	3.1434	0.0013667	2.3979	0.0010426	434.7799642778913	44.364	1.5041	44.814	44.322	45.826	0.45025					111	36	4	0	0	0	0.90465	1	4166	4166		40.573	12.318	1	4473900	+		28071	22424	18816	18826	31879	31879					0.10388447425293634
LIGKRVSREAA	11	Unmodified	_LIGKRVSREAA_					0	0	0		ENST00000320849.8_1_20:34844201-34844534:+|nuORF	ENST00000320849.8_1_20:34844201-34844534:+|nuORF	ENST00000320849.8_1_20:34844201-34844534:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5805358886719	3	400.578811	1198.7146	3.1805	0.001274	0.74448	0.00029822	3.925	0.0015723	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.72374	1	12310	12310		27.644	0	1	4827300			28072	10031	18817	18827	31880	31880					0.12319572445676386
LIGLARGL	8	Unmodified	_LIGLARGL_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78533935546875	2	406.771263	811.527973	2.3205	0.00094391	4.3886	0.0017852	6.7091	0.0027291	406.7727128628862	31.882	0.23984	31.876	31.66	31.9	-0.0061455					6	5	2	0	0	0	0.4196	1	1758	1758		37.028	0	1	33493	+		28073	16117	18818	18828	31881	31881					0.11467000347954581
LIGLAVDVI	9	Unmodified	_LIGLAVDVI_					0	0	0			REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7929992675781	2	456.791861	911.569169	0.050318	2.2985E-05	2.6739	0.0012214	2.7242	0.0012444	456.7929831409672	38.348	1.1506	38.32	37.435	38.586	-0.027843					79	26	4	0	0	0	0.7932	2	2505	2505;2515		26.796	1.3459	1	1618700	+		28074	18515	18819	18829	31882;31883	31882					0.10984716596760791
LIGLAVDVI	9	Unmodified	_LIGLAVDVI_					0	0	0			REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.793212890625	2	456.791861	911.569169	-1.0391	-0.00047467	3.9273	0.001794	2.8882	0.0013193	456.79357477476594	37.792	1.0999	37.741	37.317	38.417	-0.050373					69	24	4	0	0	0	0.76996	1	2602	2602		33.516	0	1	2264600	+		28075	18515	18819	18829	31884	31884					0.10984716596760791
LIGLAVDVI	9	Unmodified	_LIGLAVDVI_					0	0	0			REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7929992675781	2	456.791861	911.569169	-1.1724	-0.00053555	3.9802	0.0018181	2.8078	0.0012826	456.7935742947897	38.88	1.6337	38.833	37.942	39.576	-0.047001					120	37	4	0	0	0	0.7932	1	2732	2732		26.796	0	1	2323700	+		28076	18515	18819	18829	31885	31885					0.10984716596760791
LIGLAVDVI	9	Unmodified	_LIGLAVDVI_					0	0	0			REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.793212890625	2	456.791861	911.569169	-1.4265	-0.00065161	4.1949	0.0019162	2.7684	0.0012646	456.7936601394385	37.79	2.3589	37.801	37.33	39.689	0.011173					114	54	4	0	0	0	0.76996	1	2531	2531		33.516	0	1	2031500	+		28077	18515	18819	18829	31886	31886					0.10984716596760791
LIGLAVDVI	9	Unmodified	_LIGLAVDVI_					0	0	0			REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79107666015625	2	456.791861	911.569169	-1.2376	-0.00056532	3.7836	0.0017283	2.5461	0.001163	456.79347564689675	46.375	1.5387	46.391	45.441	46.979	0.015511					66	42	2	0	0	0	0.7932	1	3347	3347		26.796	0	1	175320	+		28078	18515	18819	18829	31887	31887					0.10984716596760791
LIGLAVDVI	9	Unmodified	_LIGLAVDVI_					0	0	0			REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79095458984375	2	456.791861	911.569169	0.30037	0.00013721	2.5195	0.0011509	2.8199	0.0012881	456.79289757972145	49.9	2.3678	49.942	48.602	50.969	0.04224					107	64	2	0	0	0	0.7932	1	3823	3823		19.36	1.995	1	208080	+		28079	18515	18819	18829	31888	31888					0.10984716596760791
LIGLAVDVI	9	Unmodified	_LIGLAVDVI_					0	0	0			REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7926940917969	2	456.791861	911.569169	-2.1986	-0.0010043	3.4286	0.0015662	1.23	0.00056186	456.7933193778514	39.928	2.2	40.296	39.048	41.248	0.36797					193	55	5	0	0	0	0.7932	1	3367	3367		26.796	0	1	10973000	+		28080	18515	18819	18829	31889	31889					0.10984716596760791
LIGLAVDVI	9	Unmodified	_LIGLAVDVI_					0	0	0			REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7919006347656	2	456.791861	911.569169	-2.8446	-0.0012994	3.6569	0.0016705	0.81235	0.00037108	456.79337927026637	41.437	2.022	41.851	41.294	43.316	0.4139					109	52	4	0	0	0	0.7932	1	3614	3614		26.796	1.3459	1	8003100	+		28081	18515	18819	18829	31890	31890					0.10984716596760791
LIGLAVDVI	9	Unmodified	_LIGLAVDVI_					0	0	0			REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79229736328125	2	456.791861	911.569169	-1.4135	-0.00064567	2.5195	0.0011509	1.106	0.00050522	456.7928761630725	39.835	2.0275	40.401	39.33	41.358	0.56588					154	50	4	0	0	0	0.76402	1	3349	3349		35.201	0	1	4024400	+		28082	18515	18819	18829	31891	31891					0.10984716596760791
LIGLAVDVI	9	Unmodified	_LIGLAVDVI_					0	0	0			REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	456.791861	911.569169	-1.3105	-0.00059864	3.7115	0.0016954	2.4009	0.0010967	456.79343734662524	45.591	1.382	46.062	45.313	46.695	0.4714	-0.10154	0.00042656	NaN	26.796	59	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	304510	+		28083	18515	18819	18829							0.10984716596760791
LIGLAVDVI	9	Unmodified	_LIGLAVDVI_					0	0	0			REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	REV__nc|ENSG00000122783|Q9BWK5-3|CYREN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	456.791861	911.569169	-0.76219	-0.00034816	3.0417	0.0013894	2.2795	0.0010412	456.79315221237187	45.029	1.5686	45.873	45.544	47.113	0.84437	-0.29068	-0.00018537	NaN	26.796	62	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	385500	+		28084	18515	18819	18829							0.10984716596760791
LIGLEAILA	9	Unmodified	_LIGLEAILA_					0	0	0			REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7887878417969	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.7932	1	2671	2671		19.36	1.0356	1	1012300	+		28085	18554	18820	18830	31892	31892					0.10984716596749422
LIGLEAILA	9	Unmodified	_LIGLEAILA_					0	0	0			REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79266357421875	2	456.791861	911.569169	0.10619	4.8505E-05	2.6551	0.0012128	2.7613	0.0012614	456.7929673289598	38.995	1.2001	38.965	38.494	39.694	-0.03027					96	27	4	0	0	0	0.76996	1	2721	2721		33.516	1.5607	1	2198500	+		28086	18554	18820	18830	31893	31893					0.10984716596749422
LIGLEAILA	9	Unmodified	_LIGLEAILA_					0	0	0			REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7906188964844	2	456.791861	911.569169	-1.3117	-0.00059915	2.7647	0.0012629	1.4531	0.00066375	456.79301301178594	40.135	1.4029	40.092	39.45	40.853	-0.043697					111	34	4	0	0	0	0.7932	1	2876	2876		20.482	1.1219	1	1093900	+		28087	18554	18820	18830	31894	31894					0.10984716596749422
LIGLEAILA	9	Unmodified	_LIGLEAILA_					0	0	0			REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79315185546875	2	456.791861	911.569169	-1.2516	-0.0005717	4.1535	0.0018973	2.9019	0.0013256	456.7936304493402	37.846	1.122	37.863	37.475	38.597	0.016563					101	34	4	0	0	0	0.78851	1	2177	2177		28.254	2.8041	1	1324300	+		28088	18554	18820	18830	31895	31895					0.10984716596749422
LIGLEAILA	9	Unmodified	_LIGLEAILA_					0	0	0			REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.792724609375	2	456.791861	911.569169	0.032056	1.4643E-05	2.9264	0.0013367	2.9584	0.0013514	456.7930672355845	37.708	1.0507	37.65	37.238	38.288	-0.057915					86	33	4	0	0	0	0.69914	1	2150	2150		40.573	7.057	1	1430300	+		28089	18554	18820	18830	31896	31896					0.10984716596749422
LIGLGKVL	8	Unmodified	_LIGLGKVL_					0	0	0			REV__ENSG00000089154|ENST00000300648|GCN1	REV__ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.784423828125	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.80127	1	1664	1664		16.705	0	1	1756100	+		28090	16963	18821	18831	31897	31897					0.13981055150509292
LIGLGLPWAL	10	Unmodified	_LIGLGLPWAL_					0	0	0		ENSG00000185052|ENST00000328041|SLC24A3	ENSG00000185052|ENST00000328041|SLC24A3	ENSG00000185052|ENST00000328041|SLC24A3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.8277587890625	2	526.828778	1051.643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.629	1	70.701	70.201	71.201	0.071037								0	0	0	0.45132	1	6392	6392		35.201	2.3883	1				28091	7675	18822	18832	31898	31898					0.11924684759060256
LIGLGLPWAL	10	Unmodified	_LIGLGLPWAL_					0	0	0		ENSG00000185052|ENST00000328041|SLC24A3	ENSG00000185052|ENST00000328041|SLC24A3	ENSG00000185052|ENST00000328041|SLC24A3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.8247680664062	2	526.828778	1051.643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.512	1	71.588	71.088	72.088	0.076225								0	0	0	0.45132	1	6493	6493		26.796	0	1				28092	7675	18822	18832	31899	31899					0.11924684759060256
LIGLHFKIKP	10	Unmodified	_LIGLHFKIKP_					0	0	0		ENST00000544850.5_1_12:10758876-10761762:-|nuORF;nc|ENSG00000162385|P61326-2|MAGOH;ENSG00000162385|ENST00000371470|MAGOH;ENSG00000111196|ENST00000320756|MAGOHB	ENST00000544850.5_1_12:10758876-10761762:-|nuORF	ENST00000544850.5_1_12:10758876-10761762:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	583.3767700195312	2	583.376426	1164.7383	0.63475	0.0003703	0.35856	0.00020917	0.99331	0.00057947	583.376388327019	44.912	1.522	44.924	44.229	45.751	0.012058					108	36	4	0	0	0	0.85939	1	3212	3212		23.042	1.0826	1	1529200			28093	2560	18823	18833	31900	31900					0.16252037950107479
LIGLHFKIKP	10	Unmodified	_LIGLHFKIKP_					0	0	0		ENST00000544850.5_1_12:10758876-10761762:-|nuORF;nc|ENSG00000162385|P61326-2|MAGOH;ENSG00000162385|ENST00000371470|MAGOH;ENSG00000111196|ENST00000320756|MAGOHB	ENST00000544850.5_1_12:10758876-10761762:-|nuORF	ENST00000544850.5_1_12:10758876-10761762:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.367431640625	2	583.376426	1164.7383	-2.1463	-0.0012521	1.2498	0.00072913	-0.89647	-0.00052298	583.3769989741414	43.059	2.3047	43.833	43.416	45.72	0.7738					144	56	4	0	0	0	0.85438	1	3943	3943		16.473	4.2663	1	7573300			28094	2560	18823	18833	31901	31901					0.16252037950107479
LIGLIFEGTI	10	Unmodified	_LIGLIFEGTI_					0	0	0			REV__ENSG00000121314|ENST00000240615|TAS2R8	REV__ENSG00000121314|ENST00000240615|TAS2R8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3272705078125	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.16	1	114.14	113.64	114.64	-0.024452								0	0	0	0.45132	1	12643	12643		23.042	0	1		+		28095	18450	18824	18834	31902	31902					0.09816657314013355
LIGLISPGV	9	Unmodified	_LIGLISPGV_					0	0	0			REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516784667969	2	434.778754	867.542954	-0.16714	-7.2667E-05	2.9703	0.0012914	2.8031	0.0012187	434.78018656753665	78.076	1.0863	78.132	77.589	78.675	0.056122					67	41	2	0	0	0	0.20789	1	7593	7593		20.482	3.1169	1	86846	+		28096	28635	18825	18835	31903	31903					0.10388447425293634
LIGLISPGV	9	Unmodified	_LIGLISPGV_					0	0	0			REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	REV__ENST00000552957.5_1_14:29247336-29247399:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7780456542969	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.69914	1	1941	1941		40.573	7.057	1	4737100	+		28097	28635	18825	18835	31904	31904					0.10388447425293634
LIGLKELP	8	Unmodified	_LIGLKELP_					0	0	0			REV__ENST00000395407.6_1_15:69591360-69629719:+|nuORF	REV__ENST00000395407.6_1_15:69591360-69629719:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.78790283203125	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.90465	1	2909	2909		40.573	0	1	11085000	+		28098	26108	18826	18836	31905	31905					0.11308733942325944
LIGLKELP	8	Unmodified	_LIGLKELP_					0	0	0			REV__ENST00000395407.6_1_15:69591360-69629719:+|nuORF	REV__ENST00000395407.6_1_15:69591360-69629719:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7874755859375	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.89962	1	3198	3198		38.806	5.2906	1	12523000	+		28099	26108	18826	18836	31906	31906					0.11308733942325944
LIGLLEKDM	9	Unmodified	_LIGLLEKDM_					0	0	0			REV__nc|ENSG00000120500|P36575-2|ARR3	REV__nc|ENSG00000120500|P36575-2|ARR3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3135375976562	2	516.293911	1030.57327	2.7598	0.0014249	1.1435	0.00059036	3.9032	0.0020152	516.2941847258196	99.399	0.78157	99.345	98.868	99.65	-0.053741					32	18	3	0	0	0	0.20789	1	10743	10743		30.504	4.9296	1	249020	+		28100	18415	18827	18837	31907	31907					0.05920438028147146
LIGLLEKDM	9	Unmodified	_LIGLLEKDM_					0	0	0			REV__nc|ENSG00000120500|P36575-2|ARR3	REV__nc|ENSG00000120500|P36575-2|ARR3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.31396484375	2	516.293911	1030.57327	0.87122	0.00044981	1.318	0.00068049	2.1893	0.0011303	516.2948146887278	99.121	1.1749	99.168	98.765	99.94	0.047531					52	27	3	0	0	0	0.20789	1	10576	10576		38.806	4.6336	1	448220	+		28101	18415	18827	18837	31908	31908					0.05920438028147146
LIGLLLASVC	10	Unmodified	_LIGLLLASVC_					0	0	0			REV__ENSG00000172339|ENST00000370205|ALG14	REV__ENSG00000172339|ENST00000370205|ALG14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29034423828125	2	501.306821	1000.59909	-0.19507	-9.7787E-05	-4.4423	-0.002227	-4.6374	-0.0023247	501.30433157440234	85.665	0.20775	86.113	86.027	86.235	0.44736					5	4	2	0	0	0	0.37624	1	10060	10060		23.042	0	1	38285	+		28102	21820	18828	18838	31909	31909					0.09881332270447274
LIGLLSPTVY	10	Unmodified	_LIGLLSPTVY_					0	0	0		ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267822265625	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.54	1	112.51	112.01	113.01	-0.025414								0	0	0	0.45132	1	12438	12438		40.573	8.6178	1				28103	11240	18829	18839	31910	31910					0.09816657313990618
LIGLLSPTVY	10	Unmodified	_LIGLLSPTVY_					0	0	0		ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3278198242188	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.1	1	113.08	112.58	113.58	-0.024811								0	0	0	0.45132	1	12509	12509		30.504	1.3541	1				28104	11240	18829	18839	31911	31911					0.09816657313990618
LIGLLSPTVY	10	Unmodified	_LIGLLSPTVY_					0	0	0		ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3262939453125	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.79	1	113.76	113.26	114.26	-0.024452								0	0	0	0.45132	1	12595	12595		23.042	0	1				28105	11240	18829	18839	31912	31912					0.09816657313990618
LIGLLSPTVY	10	Unmodified	_LIGLLSPTVY_					0	0	0		ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3277587890625	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.23	1	114.21	113.71	114.71	-0.024452								0	0	0	0.45132	1	12653	12653		18.324	0.062328	1				28106	11240	18829	18839	31913	31913					0.09816657313990618
LIGLLSPTVY	10	Unmodified	_LIGLLSPTVY_					0	0	0		ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3274536132812	2	538.323525	1074.6325	1.8602	0.0010014	4.4695	0.0024061	6.3297	0.0034074	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.86201	1	12317	12317		24.203	0	1	19391000			28107	11240	18829	18839	31914	31914					0.09816657313990618
LIGLNDVTVYT	11	Unmodified	_LIGLNDVTVYT_					0	0	0			REV__nc|ENSG00000120868|O14727-5|APAF1	REV__nc|ENSG00000120868|O14727-5|APAF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3663940429688	2	604.332079	1206.6496	-1.2751	-0.0007706	-0.64042	-0.00038702	-1.9156	-0.0011576	604.3322357985654	104.71	0.53051	104.81	104.67	105.2	0.093857					22	12	3	0	0	0	0.17431	1	11096	11096		31.53	12.426	1	136350	+		28108	18434	18830	18840	31915	31915					0.05454533129136507
LIGLNTSLWTP	11	Unmodified	_LIGLNTSLWTP_					0	0	0			REV__ENSG00000153317|ENST00000518721|ASAP1	REV__ENSG00000153317|ENST00000518721|ASAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.5640563964844	3	405.564168	1213.67067	-1.0529	-0.00042701	2.5673	0.0010412	1.5144	0.00061418	405.5651485487608	63.261	1.4207	63.284	62.805	64.225	0.022984					129	62	3	0	0	0	0.73893	1	5560	5560		16.53	0	1	264990	+		28109	20346	18831	18841	31916	31916					0.0723854322866373
LIGLPDSP	8	Unmodified	_LIGLPDSP_					0	0	0			REV__ENST00000325042.2_1_7:22765745-22766153:-|nuORF	REV__ENST00000325042.2_1_7:22765745-22766153:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7845458984375	2	406.231636	810.448719	1.0883	0.0004421	-0.48482	-0.00019695	0.60348	0.00024515	406.23128448746377	34.522	0.97282	34.827	34.2	35.173	0.30494					29	23	2	0	0	0	0.4196	1	2549	2549		35.201	14.719	1	212610	+		28110	25053	18832	18842	31917	31917					0.035913086031428065
LIGLPKEI	8	Unmodified	_LIGLPKEI_					0	0	0			REV__ENSG00000078814|ENST00000262873|MYH7B	REV__ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7877502441406	2	441.786579	881.558604	-1.2332	-0.00054481	3.5907	0.0015863	2.3575	0.0010415	441.7880163081002	41.793	3.3981	41.755	40.553	43.951	-0.038223					227	85	5	0	0	0	0.92973	1	3324	3324		50.025	0	1	13573000	+		28111	16773	18833	18843	31918	31918					0.11308733942325944
LIGLPKEI	8	Unmodified	_LIGLPKEI_					0	0	0			REV__ENSG00000078814|ENST00000262873|MYH7B	REV__ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7872619628906	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.90024	1	2667	2667		39.021	9.18	1	10128000	+		28112	16773	18833	18843	31919	31919					0.11308733942325944
LIGLSLRFGT	10	Unmodified	_LIGLSLRFGT_					0	0	0			REV__ENSG00000085871|ENST00000265498|MGST2	REV__ENSG00000085871|ENST00000265498|MGST2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8394775390625	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.47	1	119.44	118.94	119.94	-0.024033								0	0	0	0.45132	1	13236	13236		36.447	5.9431	1		+		28113	16900	18834	18844	31920	31920					0.10418595265377917
LIGLSVYKLN	10	Unmodified	_LIGLSVYKLN_					0	0	0			REV__nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	REV__nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3399047851562	2	560.342249	1118.66995	1.3861	0.00077669	-4.4809	-0.0025108	-3.0948	-0.0017342	560.3396736903244	107.12	0.97542	107.15	106.67	107.65	0.035614					55	22	3	0	0	0	0.8608	1	11745	11745		34.173	0	1	800860	+		28114	18274	18835	18845	31921	31921					0.11535748579603933
LIGLSVYKLN	10	Unmodified	_LIGLSVYKLN_					0	0	0			REV__nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	REV__nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402099609375	2	560.342249	1118.66995	-1.4184	-0.00079481	-2.3281	-0.0013045	-3.7465	-0.0020993	560.3408991920513	102.18	3.487	102.32	101.71	105.2	0.13569					387	86	7	0	0	0	0.86218	1	10971	10971		32.812	0	1	120110000	+		28115	18274	18835	18845	31922	31922					0.11535748579603933
LIGLVKLIHLQ	11	Unmodified	_LIGLVKLIHLQ_					0	0	0			REV__nc|ENSG00000136603|P12757-4|SKIL	REV__nc|ENSG00000136603|P12757-4|SKIL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.916015625	2	623.915916	1245.81728	-0.066149	-4.1272E-05	1.212	0.00075617	1.1458	0.0007149	623.9164002060752	108.11	0.41644	108.11	107.98	108.4	0					27	18	2	0	0	0	0.85101	1	11276	11276		5.9211	0	1	1054800	+		28116	19321	18836	18846	31923	31923					0.2042026518442981
LIGLVKLIHLQ	11	Unmodified	_LIGLVKLIHLQ_					0	0	0			REV__nc|ENSG00000136603|P12757-4|SKIL	REV__nc|ENSG00000136603|P12757-4|SKIL	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	623.915916	1245.81728	-0.066149	-4.1272E-05	1.212	0.00075617	1.1458	0.0007149	623.9164002060752	108.11	0.41644	108.11	107.98	108.4	0	-0.1481	-0.0004427	NaN	5.9211	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1054800	+		28117	19321	18836	18846							0.2042026518442981
LIGLVKLIHLQ	11	Unmodified	_LIGLVKLIHLQ_					0	0	0			REV__nc|ENSG00000136603|P12757-4|SKIL	REV__nc|ENSG00000136603|P12757-4|SKIL	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	623.915916	1245.81728	-1.2116	-0.00075595	2.0755	0.0012949	0.86384	0.00053896	623.9173966611577	108.38	0.24596	108.4	108.27	108.52	0.020561	0.1481	0.00063478	NaN	5.9211	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	736110	+		28118	19321	18836	18846							0.2042026518442981
LIGMYALYV	9	Oxidation (M)	_LIGM(Oxidation (M))YALYV_		LIGM(1)YALYV		LIGM(49)YALYV	0	0	1			REV__ENST00000544293.1_1_11:73879278-73881837:-|nuORF	REV__ENST00000544293.1_1_11:73879278-73881837:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7806396484375	2	529.783179	1057.5518	0.70031	0.00037101	-4.4484	-0.0023567	-3.7481	-0.0019857	529.7806785295993	51.421	0.82317	52.164	51.849	52.672	0.7429					43	19	3	0	0	0	0.55559	1	5114	5114		49.211	10.189	1	1458900	+		28119	28513	18837	18847	31924	31924		421			0.025330529994334938
LIGNFRVL	8	Unmodified	_LIGNFRVL_					0	0	0		ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2890930175781	2	466.28982	930.565087	-0.11855	-5.5279E-05	0.27043	0.0001261	0.15188	7.0821E-05	466.2897602326147	74.173	1.0938	74.216	73.973	75.067	0.0429					90	43	3	0	0	0	0.79972	1	7075	7075		62.978	12.954	1	860010			28120	11748	18838	18848	31925	31925					0.09702671893705883
LIGNFRVL	8	Unmodified	_LIGNFRVL_					0	0	0		ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2897033691406	2	466.28982	930.565087	-0.42617	-0.00019872	0.52169	0.00024326	0.095514	4.4537E-05	466.2898922448067	74.098	1.2536	74.054	73.807	75.061	-0.043877					90	43	4	0	0	0	0.94132	1	7289	7289		54.765	12.29	1	967050			28121	11748	18838	18848	31926	31926					0.09702671893705883
LIGNFRVL	8	Unmodified	_LIGNFRVL_					0	0	0		ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.28961181640625	2	466.28982	930.565087	-0.64111	-0.00029894	0.64441	0.00030048	0.0033003	1.5389E-06	466.28999408550436	73.948	1.2575	73.992	73.721	74.978	0.043648					98	48	3	0	0	0	0.89567	1	7124	7124		57.453	1.9484	1	991630			28122	11748	18838	18848	31927	31927					0.09702671893705883
LIGNFRVL	8	Unmodified	_LIGNFRVL_					0	0	0		ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.2896728515625	2	466.28982	930.565087	0.52735	0.0002459	-0.45222	-0.00021086	0.075133	3.5034E-05	466.28951494352106	73.831	0.94804	73.962	73.721	74.669	0.13127					82	37	3	0	0	0	0.45589	1	6821	6821		77.944	17.65	1	894650			28123	11748	18838	18848	31928	31928					0.09702671893705883
LIGNFRVL	8	Unmodified	_LIGNFRVL_					0	0	0		ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.2887878417969	2	466.28982	930.565087	-1.2303	-0.0005737	1.203	0.00056094	-0.027368	-1.2762E-05	466.29024869048817	74.015	1.0053	74.101	73.822	74.827	0.085907					87	43	3	0	0	0	0.45589	2	6792	6792;6815		77.944	10.686	1	935090			28124	11748	18838	18848	31929;31930	31929					0.09702671893705883
LIGNFRVL	8	Unmodified	_LIGNFRVL_					0	0	0		ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2890930175781	2	466.28982	930.565087	-1.1838	-0.00055201	1.3476	0.00062836	0.16374	7.6351E-05	466.29033790400257	73.255	0.82825	73.643	73.291	74.119	0.38779					44	22	3	0	0	0	0.45589	1	8210	8210		77.944	14.965	1	1844000			28125	11748	18838	18848	31931	31931					0.09702671893705883
LIGNFRVL	8	Unmodified	_LIGNFRVL_					0	0	0		ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	ENST00000438202.5_1_10:29747497-29747563:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.2882995605469	2	466.28982	930.565087	-0.2678	-0.00012487	0.44266	0.00020641	0.17486	8.1533E-05	466.28988601082216	73.11	1.1799	73.664	73.314	74.494	0.55386					47	33	3	0	0	0	0.89567	1	8247	8247		57.453	7.4281	1	1946100			28126	11748	18838	18848	31932	31932					0.09702671893705883
LIGNLQEM	8	Unmodified	_LIGNLQEM_					0	0	0			REV__ENSG00000111057|ENST00000388835|KRT18;REV__ENST00000510488.1_1_3:141189685-141190057:-|nuORF	REV__ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	459.23931884765625	2	459.241678	916.468803	-1.1984	-0.00055035	-2.3563	-0.0010821	-3.5547	-0.0016324	459.24036857381975	47.447	1.199	47.466	47.099	48.298	0.018967					78	36	3	0	0	0	0.38363	2	3547	3547;3559		90.777	10.837	1	800470	+		28127	17846;27954	18839	18849	31933;31934	31933					0.0072273627146159924
LIGNLQEM	8	Unmodified	_LIGNLQEM_					0	0	0			REV__ENSG00000111057|ENST00000388835|KRT18;REV__ENST00000510488.1_1_3:141189685-141190057:-|nuORF	REV__ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	459.2398681640625	2	459.241678	916.468803	0.28287	0.00012991	-3.987	-0.001831	-3.7041	-0.0017011	459.23972142324425	47.477	1.3773	47.515	47.034	48.411	0.037731					78	43	2	0	0	0	0.38363	1	3544	3544		90.777	24.973	1	852740	+		28128	17846;27954	18839	18849	31935	31935					0.0072273627146159924
LIGNLQEM	8	Unmodified	_LIGNLQEM_					0	0	0			REV__ENSG00000111057|ENST00000388835|KRT18;REV__ENST00000510488.1_1_3:141189685-141190057:-|nuORF	REV__ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	459.2398681640625	2	459.241678	916.468803	-0.30768	-0.0001413	-3.312	-0.001521	-3.6197	-0.0016623	459.23999743377124	47.433	1.4389	47.345	46.818	48.257	-0.087646					86	43	3	0	0	0	0.79403	1	3541	3541		63.306	13.865	1	943680	+		28129	17846;27954	18839	18849	31936	31936					0.0072273627146159924
LIGNLQEM	8	Unmodified	_LIGNLQEM_					0	0	0			REV__ENSG00000111057|ENST00000388835|KRT18;REV__ENST00000510488.1_1_3:141189685-141190057:-|nuORF	REV__ENSG00000111057|ENST00000388835|KRT18	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	459.241678	916.468803	0.094277	4.3296E-05	-3.6815	-0.0016907	-3.5872	-0.0016474	459.2396793442499	47.609	0.78713	47.599	47.26	48.047	-0.0093269	0.11359	-0.00023871	NaN	90.777	33	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	195260	+		28130	17846;27954	18839	18849							0.0072273627146159924
LIGNLQEM	8	Unmodified	_LIGNLQEM_					0	0	0			REV__ENSG00000111057|ENST00000388835|KRT18;REV__ENST00000510488.1_1_3:141189685-141190057:-|nuORF	REV__ENSG00000111057|ENST00000388835|KRT18	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	459.241678	916.468803	-0.78574	-0.00036085	-3.1536	-0.0014483	-3.9394	-0.0018091	459.24003226302295	47.418	0.53864	47.392	47.07	47.609	-0.026737	-0.09409	0.00024612	NaN	90.777	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185820	+		28131	17846;27954	18839	18849							0.0072273627146159924
LIGNLQEM	8	Unmodified	_LIGNLQEM_					0	0	0			REV__ENSG00000111057|ENST00000388835|KRT18;REV__ENST00000510488.1_1_3:141189685-141190057:-|nuORF	REV__ENSG00000111057|ENST00000388835|KRT18	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	459.241678	916.468803	-0.022426	-1.0299E-05	-3.7633	-0.0017282	-3.7857	-0.0017385	459.2398652095192	47.6	0.69093	47.597	47.197	47.888	-0.0024452	0.11156	-0.00031381	NaN	90.777	29	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	201540	+		28132	17846;27954	18839	18849							0.0072273627146159924
LIGNLQEM	8	Unmodified	_LIGNLQEM_					0	0	0			REV__ENSG00000111057|ENST00000388835|KRT18;REV__ENST00000510488.1_1_3:141189685-141190057:-|nuORF	REV__ENSG00000111057|ENST00000388835|KRT18	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	459.241678	916.468803	-0.30768	-0.0001413	-3.312	-0.001521	-3.6197	-0.0016623	459.23999743377124	47.433	1.4389	47.345	46.818	48.257	-0.087646	-0.14069	0.00010069	NaN	90.777	86	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	943680	+		28133	17846;27954	18839	18849							0.0072273627146159924
LIGNYGIPPD	10	Unmodified	_LIGNYGIPPD_					0	0	0		ENSG00000084774|ENST00000264705|CAD	ENSG00000084774|ENST00000264705|CAD	ENSG00000084774|ENST00000264705|CAD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.7804565429688	2	529.779482	1057.54441	-0.26256	-0.0001391	3.0618	0.0016221	2.7992	0.001483	529.7809232100764	52.644	0.70679	52.569	52.293	53	-0.074509					42	20	3	0	0	0	0.86589	1	4282	4282		29.15	1.2673	1	513400			28134	1526	18840	18850	31937	31937					0.017940367233904908
LIGPCFFL	8	Unmodified	_LIGPCFFL_					0	0	0		nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1;ENSG00000134369|ENST00000685211|NAV1;nc|ENSG00000134369|Q8NEY1-5|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.2474060058594	2	455.248775	908.482997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.013	1	52.989	52.489	53.489	-0.023849								0	0	0	0.2945	1	4715	4715		33.493	0	1				28135	3931	18841	18851	31938	31938					0.02509433490399715
LIGPELALLS	10	Unmodified	_LIGPELALLS_					0	0	0			REV__ENSG00000168140|ENST00000304735|VASN	REV__ENSG00000168140|ENST00000304735|VASN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3189697265625	2	513.3157	1024.61685	-0.40874	-0.00020981	2.4775	0.0012717	2.0687	0.0010619	513.3169683772445	55.191	1.5464	55.154	54.574	56.12	-0.036827					75	51	2	0	0	0	0.86589	1	4638	4638		29.15	1.2673	1	226240	+		28136	21465	18842	18852	31939	31939					0.10552370796949617
LIGPFTLKSAS	11	Unmodified	_LIGPFTLKSAS_					0	0	0			REV__ENSG00000051341|ENST00000264233|POLQ	REV__ENSG00000051341|ENST00000264233|POLQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.330078125	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.64498	2	9549	9549;10129		39.253	1.4413	1	15673000	+		28137	16382	18843	18853	31940;31941	31940					0.0881915819995811
LIGPFTLKSAS	11	Unmodified	_LIGPFTLKSAS_					0	0	0			REV__ENSG00000051341|ENST00000264233|POLQ	REV__ENSG00000051341|ENST00000264233|POLQ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.33056640625	2	567.331882	1132.64921	0.77491	0.00043963	-4.0071	-0.0022734	-3.2322	-0.0018337	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.732	1	8901	8901		26.063	0.48933	1	6344600	+		28138	16382	18843	18853	31942	31942					0.0881915819995811
LIGPLVSLG	9	Unmodified	_LIGPLVSLG_					0	0	0		ENST00000509537.1_1_4:187510304-187511672:-|nuORF	ENST00000509537.1_1_4:187510304-187511672:-|nuORF	ENST00000509537.1_1_4:187510304-187511672:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7804260253906	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.757	1	67.816	67.316	68.316	0.059288								0	0	0	0.30672	1	6051	6051		28.254	1.4582	1				28139	12993	18844	18854	31943	31943					0.10388447425282266
LIGPSGRRR	9	Unmodified	_LIGPSGRRR_					0	0	0			REV__ENSG00000142449|ENST00000600128|FBN3	REV__ENSG00000142449|ENST00000600128|FBN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.30926513671875	2	506.312149	1010.60975	-0.48862	-0.00024739	-3.0528	-0.0015457	-3.5414	-0.0017931	506.3111132700508	55.04	1.6112	55.102	54.659	56.271	0.061703					80	58	2	0	0	0	0.7932	1	4525	4525		25.45	1.2474	1	177360	+		28140	19740	18845	18855	31944	31944					0.10486495759755599
LIGPVELA	8	Unmodified	_LIGPVELA_					0	0	0		ENSG00000174373|ENST00000680220|RALGAPA1	ENSG00000174373|ENST00000680220|RALGAPA1	ENSG00000174373|ENST00000680220|RALGAPA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24822998046875	2	406.249829	810.485105	0.62319	0.00025317	-3.6411	-0.0014792	-3.0179	-0.001226	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.88915	1	8981	8981		35.201	1.6851	1	38001000			28141	6929	18846	18856	31945	31945					0.07228185499843676
LIGPVRIGG	9	Unmodified	_LIGPVRIGG_					0	0	0			REV__ENSG00000101846|ENST00000674429|STS	REV__ENSG00000101846|ENST00000674429|STS	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.2818603515625	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.711	1	40.711	40.211	41.211	0								0	0	0	0.31088	1	2699	2699		26.796	2.5934	1		+		28142	17305	18847	18857	31946	31946					0.10438385376664883
LIGQFVNSL	9	Unmodified	_LIGQFVNSL_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	495.78485107421875	2	495.784567	989.554582	-0.16032	-7.9484E-05	0.074497	3.6934E-05	-0.085823	-4.255E-05	495.7845305067305	56.942	0.5784	56.914	56.711	57.289	-0.028664					28	16	2	0	0	0	0.41566	1	5244	5244		56.721	3.3696	1	206710	+		28143	17579	18848	18858	31947	31947					0.05938644448622199
LIGQMRDV	8	Unmodified	_LIGQMRDV_					0	0	0		nc|ENSG00000170289|Q9NQW8-2|CNGB3;ENSG00000170289|ENST00000320005|CNGB3	nc|ENSG00000170289|Q9NQW8-2|CNGB3	nc|ENSG00000170289|Q9NQW8-2|CNGB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.25341796875	2	466.25512	930.495686	0.40858	0.0001905	-3.173	-0.0014794	-2.7644	-0.0012889	466.2535455662522	60.895	1.1821	61.014	60.015	61.197	0.11901					69	45	2	0	0	0	0.88915	1	5228	5228		35.201	6.0512	1	266480			28144	6574	18849	18859	31948	31948					0.027658448826400672
LIGRHKVM	8	Oxidation (M)	_LIGRHKVM(Oxidation (M))_		LIGRHKVM(1)		LIGRHKVM(55)	0	0	1		ENSG00000221866|ENST00000321063|PLXNA4	ENSG00000221866|ENST00000321063|PLXNA4	ENSG00000221866|ENST00000321063|PLXNA4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.28656005859375	2	485.286754	968.558955	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.691	1	76.74	76.24	77.24	0.049194								0	0	0	0.28381	1	7416	7416		54.765	12.29	1				28145	8675	18850	18860	31949	31949		153			0.07341830390544146
LIGRNPVGY	9	Unmodified	_LIGRNPVGY_					0	0	0		ENSG00000164307|ENST00000443439|ERAP1;nc|ENSG00000164307|Q9NZ08-2|ERAP1	ENSG00000164307|ENST00000443439|ERAP1	ENSG00000164307|ENST00000443439|ERAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7801208496094	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.78851	1	8164	8164		28.254	2.8041	1	385180			28146	5951	18851	18861	31950	31950					0.05589180025708629
LIGSEMGV	8	Unmodified	_LIGSEMGV_					0	0	0			REV__ENSG00000181023|ENST00000317121|OR56B1	REV__ENSG00000181023|ENST00000317121|OR56B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2088928222656	2	403.209847	804.40514	-1.2088	-0.00048741	-0.91536	-0.00036908	-2.1242	-0.00085649	403.20939277352	86.047	3.2334	86.047	85.315	88.548	0					134	74	4	0	0	0	0.87276	1	8163	8163		29.842	0	1	1412000	+		28147	22436	18852	18862	31951	31951					-0.004886241656322454
LIGSGRPGTGT	11	Unmodified	_LIGSGRPGTGT_					0	0	0			REV__ENST00000355209.8_1_22:41940147-41940408:-|nuORF	REV__ENST00000355209.8_1_22:41940147-41940408:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.28009033203125	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.7144	1	8926	8926		29.17	1.0886	1	1954800	+		28148	25371	18853	18863	31952	31952					0.03911670812158263
LIGSLIPTI	9	Unmodified	_LIGSLIPTI_					0	0	0		ENSG00000179468|ENST00000350513|OR9A2	ENSG00000179468|ENST00000350513|OR9A2	ENSG00000179468|ENST00000350513|OR9A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.80047607421875	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	3156	3156		18.324	0	1	1231300			28149	7272	18854	18864	31953	31953					0.11905003113804469
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3611450195312	2	526.359911	1050.70527	-1.5676	-0.00082514	3.904	0.0020549	2.3364	0.0012298	526.3617973555264	35.031	1.6441	35.031	34.615	36.259	0					148	43	4	0	0	0	0.8488	1	1904	1904		17.365	0.89182	1	1307600	+		28150	25635	18855	18865	31954	31954					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3612060546875	2	526.359911	1050.70527	0.086645	4.5607E-05	2.1771	0.0011459	2.2637	0.0011915	526.3609236587663	33.368	2.0596	33.371	32.762	34.822	0.0030785					171	48	5	0	0	0	0.86452	1	1928	1928		30.504	0	1	3096800	+		28151	25635	18855	18865	31955	31955					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3609619140625	2	526.359911	1050.70527	-0.016718	-8.7995E-06	2.2479	0.0011832	2.2312	0.0011744	526.3609420824897	35.324	1.4285	35.312	34.729	36.157	-0.012199					134	33	5	0	0	0	0.84874	2	2193	2171;2193		25.45	0	1	5338900	+		28152	25635	18855	18865	31956;31957	31957					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3610229492188	2	526.359911	1050.70527	0.054232	2.8545E-05	1.9819	0.0010432	2.0362	0.0010718	526.3608595612541	33.548	1.6551	33.491	33.113	34.768	-0.056385					153	37	5	0	0	0	0.8488	2	2133	2053;2133		24.203	0	1	7840300	+		28153	25635	18855	18865	31958;31959	31959					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3609008789062	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.86201	3	2279	2246;2279;2400		31.955	1.1603	1	2871800	+		28154	25635	18855	18865	31960;31961;31962	31961					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.361083984375	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.8488	2	2014	1957;2014		25.45	2.4077	1	5020100	+		28155	25635	18855	18865	31963;31964	31964					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3589477539062	2	526.359911	1050.70527	-0.47346	-0.00024921	2.7476	0.0014462	2.2741	0.001197	526.3612126681783	35.14	1.5704	35.146	34.727	36.297	0.0063934					147	36	5	0	0	0	0.86201	1	2318	2318		24.203	0	1	2682400	+		28156	25635	18855	18865	31965	31965					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3605346679688	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.84112	2	2367	2367;2497		37.159	6.6555	1	2706400	+		28157	25635	18855	18865	31966;31967	31966					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3611450195312	2	526.359911	1050.70527	-0.23001	-0.00012107	2.5809	0.0013585	2.3509	0.0012374	526.3611422284945	33.372	1.4852	33.418	33.076	34.561	0.045849					221	65	5	0	0	0	0.84874	3	1615	1615;1630;1639		30.504	6.3009	1	5657100	+		28158	25635	18855	18865	31968;31969;31970	31968					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.361083984375	2	526.359911	1050.70527	0.22046	0.00011604	2.2181	0.0011675	2.4386	0.0012836	526.3609252843382	33.187	1.6469	33.296	32.993	34.64	0.10991					241	72	5	0	0	0	0.86201	1	1628	1628		24.203	0	1	5657400	+		28159	25635	18855	18865	31971	31971					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3615112304688	2	526.359911	1050.70527	0.41493	0.0002184	1.9977	0.0010515	2.4127	0.0012699	526.3608149931753	33.292	1.7707	33.259	32.845	34.615	-0.032677					246	76	5	0	0	0	0.85694	4	1677	1594;1603;1648;1677		31.955	6.3009	1	5110100	+		28160	25635	18855	18865	31972;31973;31974;31975	31975					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.360107421875	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.84874	1	1861	1861		18.324	0	1	1221500	+		28161	25635	18855	18865	31976	31976					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3612670898438	2	526.359911	1050.70527	0.76967	0.00040513	1.4348	0.00075522	2.2045	0.0011603	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.86201	1	2341	2341		24.203	1.1603	1	7968500	+		28162	25635	18855	18865	31977	31977					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3614501953125	2	526.359911	1050.70527	1.1443	0.00060234	1.4578	0.00076731	2.6021	0.0013697	526.3605227402171	34.131	1.7657	34.341	33.942	35.708	0.21003					136	43	4	0	0	0	0.86201	2	2533	2533;2545		24.203	0	1	7568500	+		28163	25635	18855	18865	31978;31979	31978					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3611450195312	2	526.359911	1050.70527	1.057	0.00055634	1.5103	0.00079494	2.5672	0.0013513	526.3605624063631	36.088	1.9344	36.37	35.78	37.714	0.28173					146	47	5	0	0	0	0.86452	2	2834	2834;2872		30.504	0	1	5773200	+		28164	25635	18855	18865	31980;31981	31980					0.18194411107424457
LIGSLLPILL	10	Unmodified	_LIGSLLPILL_					0	0	0			REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	REV__ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3616943359375	2	526.359911	1050.70527	1.0713	0.00056389	1.2303	0.0006476	2.3016	0.0012115	526.360423923534	32.788	1.6436	32.999	32.422	34.066	0.21168					152	38	5	0	0	0	0.81018	1	2323	2323		38.806	0	1	7743700	+		28165	25635	18855	18865	31982	31982					0.18194411107424457
LIGSNGPQKFC	11	Unmodified	_LIGSNGPQKFC_					0	0	0		nc|ENSG00000198373|O00308-3|WWP2;nc|ENSG00000198373|O00308-2|WWP2;ENSG00000198373|ENST00000359154|WWP2	nc|ENSG00000198373|O00308-3|WWP2	nc|ENSG00000198373|O00308-3|WWP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353759765625	2	582.297516	1162.58048	3.1728	0.0018475	3.9177	0.0022813	7.0904	0.0041287	582.2996555837086	103.44	0.11858	103.4	103.33	103.45	-0.043755					4	2	2	0	0	0	0.17347	1	11330	11330		36.447	5.9431	1	113030			28166	8268	18856	18866	31983	31983					0.005691706285915643
LIGSVTLCLI	10	Unmodified	_LIGSVTLCLI_					0	0	0		ENST00000340308.7_1_7:140034602-140034719:-|nuORF	ENST00000340308.7_1_7:140034602-140034719:-|nuORF	ENST00000340308.7_1_7:140034602-140034719:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3135375976562	2	516.312103	1030.60965	-0.047196	-2.4368E-05	3.3567	0.0017331	3.3095	0.0017087	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.85934	1	10833	10833		35.618	3.6634	1	63062000			28167	10230	18857	18867	31984	31984					0.09557314924882121
LIGTGTRTR	9	Unmodified	_LIGTGTRTR_					0	0	0			REV__ENSG00000185269|ENST00000409678|NOTUM	REV__ENSG00000185269|ENST00000409678|NOTUM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7905578613281	2	487.790715	973.566878	0.54992	0.00026825	-0.9209	-0.00044921	-0.37098	-0.00018096	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.72402	1	8320	8320		38.806	4.6336	1	633420	+		28168	22754	18858	18868	31985	31985					0.07903680911658739
LIGTHKSKAKL	11	Unmodified	_LIGTHKSKAKL_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3789672851562	2	598.379697	1194.74484	-1.5819	-0.00094655	3.9051	0.0023368	2.3233	0.0013902	598.381910376305	40.152	1.105	40.741	40.044	41.149	0.58915					94	27	5	0	0	0	0.65746	1	3403	3403		37.812	0	1	9102300	+		28169	15467	18859	18869	31986	31986					0.15525931110846614
LIGTLKVIN	9	Unmodified	_LIGTLKVIN_					0	0	0		ENST00000591998.5_1_19:9405833-9405968:-|nuORF	ENST00000591998.5_1_19:9405833-9405968:-|nuORF	ENST00000591998.5_1_19:9405833-9405968:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2861328125	2	485.81841	969.622267	-0.84111	-0.00040863	0.96745	0.00047001	0.12634	6.1378E-05	485.81846510315603	48.464	0.48502	48.934	48.668	49.153	0.46941					17	11	2	0	0	0	0.20789	1	4701	4701		40.778	5.1599	1	152710			28170	14283	18860	18870	31987	31987					0.13624094379417784
LIGTLPTQ	8	Unmodified	_LIGTLPTQ_					0	0	0			REV__ENSG00000141449|ENST00000424526|GREB1L	REV__ENSG00000141449|ENST00000424526|GREB1L	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7524108886719	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.549	1	74.505	74.005	75.005	-0.043877								0	0	0	0.30457	1	7320	7320		50.025	2.1089	1		+		28171	19687	18861	18871	31988	31988					0.06383284011531032
LIGTMEQIF	9	Unmodified	_LIGTMEQIF_					0	0	0		nc|ENSG00000125630|Q9H9Y6-4|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-3|POLR1B	nc|ENSG00000125630|Q9H9Y6-4|POLR1B	nc|ENSG00000125630|Q9H9Y6-4|POLR1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3614501953125	2	526.27826	1050.54197	1.3612	0.00071639	4.4011	0.0023162	5.7623	0.0030326	526.2798547268643	34.316	0.20534	34.621	34.488	34.694	0.30494					6	4	2	0	0	0	0.20789	1	2558	2558		55.504	21.332	1	53932			28172	3399	18862	18872	31989	31989					0.018718649940410614
LIGTNIFGIL	10	Unmodified	_LIGTNIFGIL_					0	0	0		ENST00000497497.1_1_10:119013719-119036774:+|nuORF;ENSG00000165646|ENST00000644641|SLC18A2	ENST00000497497.1_1_10:119013719-119036774:+|nuORF	ENST00000497497.1_1_10:119013719-119036774:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8212890625	2	530.823692	1059.63283	-0.88248	-0.00046844	-3.9714	-0.0021081	-4.8539	-0.0025765	530.821384723199	80.761	1.5978	80.761	80.141	81.738	0					159	57	4	0	0	0	0.53935	2	7524	7461;7524		53.351	9.2347	1	2196600			28173	6104	18863	18873	31990;31991	31991					0.10540077033874695
LIGTNIFGIL	10	Unmodified	_LIGTNIFGIL_					0	0	0		ENST00000497497.1_1_10:119013719-119036774:+|nuORF;ENSG00000165646|ENST00000644641|SLC18A2	ENST00000497497.1_1_10:119013719-119036774:+|nuORF	ENST00000497497.1_1_10:119013719-119036774:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8208618164062	2	530.823692	1059.63283	-0.78183	-0.00041501	-3.6023	-0.0019122	-4.3841	-0.0023272	530.8213499898579	87.491	2.1796	87.491	87.035	89.215	0					73	50	2	0	0	0	0.71042	1	8371	8371		44.117	0	1	945240			28174	6104	18863	18873	31992	31992					0.10540077033874695
LIGTNIFGIL	10	Unmodified	_LIGTNIFGIL_					0	0	0		ENST00000497497.1_1_10:119013719-119036774:+|nuORF;ENSG00000165646|ENST00000644641|SLC18A2	ENST00000497497.1_1_10:119013719-119036774:+|nuORF	ENST00000497497.1_1_10:119013719-119036774:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8204956054688	2	530.823692	1059.63283	-0.07706	-4.0905E-05	-3.7072	-0.0019679	-3.7842	-0.0020088	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.81018	1	7658	7658		38.806	3.1879	1	1032800			28175	6104	18863	18873	31993	31993					0.10540077033874695
LIGTPLNLE	9	Unmodified	_LIGTPLNLE_					0	0	0			REV__ENST00000402426.2_1_6:73765044-73765512:+|nuORF	REV__ENST00000402426.2_1_6:73765044-73765512:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2865295410156	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.863	1	41.867	41.367	42.367	0.0043983								0	0	0	0.37744	1	2770	2770		51.335	5.3835	1		+		28176	26261	18864	18874	31994	31994					0.06871224728763536
LIGVGKLL	8	Unmodified	_LIGVGKLL_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.784912109375	2	406.783839	811.553125	1.6742	0.00068103	2.1022	0.00085513	3.7764	0.0015362	406.78458476785784	34.278	1.4525	34.281	33.794	35.247	0.0026054					117	34	4	0	0	0	0.82464	1	2025	2025		21.702	1.2205	1	2275400			28177	7987	18865	18875	31995	31995					0.13981055150509292
LIGVGKLL	8	Unmodified	_LIGVGKLL_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.785400390625	2	406.783839	811.553125	0.14551	5.919E-05	3.7654	0.0015317	3.9109	0.0015909	406.78526707420434	35.3	1.357	35.406	35.11	36.467	0.10603					95	43	3	0	0	0	0.82464	1	1821	1821		21.702	0	1	399180			28178	7987	18865	18875	31996	31996					0.13981055150509292
LIGVGKLL	8	Unmodified	_LIGVGKLL_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78521728515625	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.479	1	33.589	33.089	34.089	0.10991								0	0	0	0.29871	1	1637	1637		23.037	1.3344	1				28179	7987	18865	18875	31997	31997					0.13981055150509292
LIGVGKLL	8	Unmodified	_LIGVGKLL_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78533935546875	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.88915	1	1455	1455		35.201	1.6851	1	1817700			28180	7987	18865	18875	31998	31998					0.13981055150509292
LIGVGKLL	8	Unmodified	_LIGVGKLL_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7851257324219	2	406.783839	811.553125	0.022938	9.3307E-06	3.6731	0.0014942	3.696	0.0015035	406.7851827724374	33.215	0.93484	33.182	32.78	33.715	-0.032677					97	42	3	0	0	0	0.80963	1	1558	1558		15.636	0	1	368720			28181	7987	18865	18875	31999	31999					0.13981055150509292
LIGVGKLL	8	Unmodified	_LIGVGKLL_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7847900390625	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.81724	1	1772	1772		14.664	0	1	1879900			28182	7987	18865	18875	32000	32000					0.13981055150509292
LIGVGKLL	8	Unmodified	_LIGVGKLL_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7850036621094	2	406.783839	811.553125	1.6031	0.00065213	2.1137	0.0008598	3.7168	0.0015119	406.78457300863613	33.544	1.5003	33.714	33.314	34.814	0.16971					120	35	4	0	0	0	0.81548	1	2510	2510		20.482	0	1	8051400			28183	7987	18865	18875	32001	32001					0.13981055150509292
LIGVGKLL	8	Unmodified	_LIGVGKLL_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7851867675781	2	406.783839	811.553125	0.34779	0.00014148	3.2583	0.0013254	3.6061	0.0014669	406.7850428339316	31.533	1.6322	31.64	30.856	32.488	0.10707					116	37	4	0	0	0	0.86791	1	2149	2149		28.254	0	1	5012000			28184	7987	18865	18875	32002	32002					0.13981055150509292
LIGVIVIKFV	10	Unmodified	_LIGVIVIKFV_					0	0	0			REV__nc|ENSG00000142163|Q8WZA6|OR1E3	REV__nc|ENSG00000142163|Q8WZA6|OR1E3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8795166015625	2	550.875728	1099.7369	5.0694	0.0027926	1.3496	0.00074346	6.419	0.003536	550.8764150186146	108.94	0.53165	109.03	108.77	109.3	0.09005					44	23	2	0	0	0	0.88106	1	13256	13256		12.207	0.69583	1	1145600	+		28185	29897	18866	18876	32003	32003					0.19102403861370476
LIGVSWHLF	9	Unmodified	_LIGVSWHLF_					0	0	0		ENST00000396049.4_1_2:74383723-74383759:-|nuORF	ENST00000396049.4_1_2:74383723-74383759:-|nuORF	ENST00000396049.4_1_2:74383723-74383759:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7870483398438	2	536.302927	1070.5913	-0.44468	-0.00023848	-3.5698	-0.0019145	-4.0145	-0.002153	536.3006477311574	77.564	0.21156	78.132	77.968	78.179	0.56836					6	4	2	0	0	0	0.20789	1	8848	8848		31.955	0	1	57366			28186	11108	18867	18877	32004	32004					0.05882941065169689
LIGVTDNELE	10	Unmodified	_LIGVTDNELE_					0	0	0			REV__nc|ENSG00000007402|Q9NY47-4|CACNA2D2	REV__nc|ENSG00000007402|Q9NY47-4|CACNA2D2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.3195190429688	2	551.784961	1101.55537	-0.23611	-0.00013028	1.537	0.00084809	1.3009	0.00071781	551.7857204140619	34.494	0.40198	34.5	34.293	34.695	0.0063934					13	8	2	0	0	0	0.37624	1	2106	2106		34.173	0	1	33860	+		28187	15809	18868	18878	32005	32005					0.008653943069930392
LIGVVRDP	8	Unmodified	_LIGVVRDP_					0	0	0		chr1:16939688-16939894|15|14.8|0.0|20.5|+|0|None,CROCC|1	chr1:16939688-16939894|15|14.8|0.0|20.5|+|0|None,CROCC|1	chr1:16939688-16939894|15|14.8|0.0|20.5|+|0|None,CROCC|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7800598144531	2	434.766178	867.517802	0.54124	0.00023531	3.7122	0.0016139	4.2535	0.0018493	434.76633127570494	35.432	0.2273	35.438	35.292	35.519	0.0063934					6	4	2	0	0	0	0.4196	1	2221	2221		18.324	1.6194	1	12695			28188	27	18869	18879	32006	32006					0.07874392622716186
LIGYLRFITTL	11	Unmodified	_LIGYLRFITTL_					0	0	0		ENST00000468439.2_1_3:132106687-132107131:+|nuORF	ENST00000468439.2_1_3:132106687-132107131:+|nuORF	ENST00000468439.2_1_3:132106687-132107131:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26727294921875	3	437.267463	1308.78056	1.1681	0.00051075	-0.25998	-0.00011368	0.90808	0.00039707	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.76251	1	4591	4591		19.263	0	1	4130900			28189	12178	18870	18880	32007	32007					0.1385196856786024
LIHEALNAIL	10	Unmodified	_LIHEALNAIL_					0	0	0			REV__ENSG00000119927|ENST00000348367|GPAM	REV__ENSG00000119927|ENST00000348367|GPAM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8296508789062	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.86589	1	8987	8987		29.15	2.1022	1	6402500	+		28190	18387	18871	18881	32008	32008					0.10094577919812764
LIHEKFSPS	9	Unmodified	_LIHEKFSPS_					0	0	0		ENSG00000228727|ENST00000415669|SAPCD1;ENST00000476085.1_3_6:31731200-31732414:+|nuORF	ENSG00000228727|ENST00000415669|SAPCD1	ENSG00000228727|ENST00000415669|SAPCD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.2850341796875	2	529.287474	1056.5604	0.19495	0.00010318	-3.9711	-0.0021019	-3.7762	-0.0019987	529.2853187675356	38.347	0.7284	38.689	38.379	39.107	0.34187					37	17	3	0	0	0	0.38563	1	3161	3161		58.782	4.0056	1	653940			28191	8724	18872	18882	32009	32009					0.034377429602727716
LIHEKFSPS	9	Unmodified	_LIHEKFSPS_					0	0	0		ENSG00000228727|ENST00000415669|SAPCD1;ENST00000476085.1_3_6:31731200-31732414:+|nuORF	ENSG00000228727|ENST00000415669|SAPCD1	ENSG00000228727|ENST00000415669|SAPCD1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	529.287474	1056.5604	-0.2221	-0.00011755	-3.3881	-0.0017933	-3.6102	-0.0019108	529.2856385182384	38.217	0.56317	38.74	38.473	39.036	0.52235	0.025491	0.00027186	NaN	58.782	34	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	550150			28192	8724	18872	18882							0.034377429602727716
LIHFKSVN	8	Unmodified	_LIHFKSVN_					0	0	0		ENST00000602748.5_1_7:148497812-148498055:+|nuORF	ENST00000602748.5_1_7:148497812-148498055:+|nuORF	ENST00000602748.5_1_7:148497812-148498055:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2773742675781	2	479.279452	956.544351	-0.83761	-0.00040145	-3.5851	-0.0017182	-4.4227	-0.0021197	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.88915	1	7914	7914		35.201	1.6851	1	2142700			28193	14412	18873	18883	32010	32010					0.0643408151404401
LIHGKVKEF	9	Unmodified	_LIHGKVKEF_					0	0	0		ENSG00000138823|ENST00000265517|MTTP	ENSG00000138823|ENST00000265517|MTTP	ENSG00000138823|ENST00000265517|MTTP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7874145507812	2	535.821484	1069.62842	0.028464	1.5252E-05	-0.19331	-0.00010358	-0.16485	-8.833E-05	535.8214977423455	78.532	0.38176	78.943	78.675	79.057	0.4106					14	8	2	0	0	0	0.20789	1	8939	8939		38.806	0	1	158360			28194	4339	18874	18884	32011	32011					0.09638612610933706
LIHIYKHK	8	Unmodified	_LIHIYKHK_					0	0	0			REV__ENST00000474543.5_1_20:57564608-57568882:+|nuORF	REV__ENST00000474543.5_1_20:57564608-57568882:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3238525390625	2	526.324194	1050.63383	0.45815	0.00024113	0.53936	0.00028388	0.99751	0.00052501	526.3243663512045	59.761	1.5451	59.877	59.01	60.555	0.1157					98	50	2	0	0	0	0.88915	1	5174	5174		35.201	12.158	1	175310	+		28195	17245	18875	18885	32012	32012					0.11054336193410563
LIHIYKHK	8	Unmodified	_LIHIYKHK_					0	0	0			REV__ENST00000474543.5_1_20:57564608-57568882:+|nuORF	REV__ENST00000474543.5_1_20:57564608-57568882:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.326416015625	2	526.324194	1050.63383	-0.47524	-0.00025013	1.6222	0.00085382	1.147	0.00060369	526.3249338013496	58.169	1.8631	58.152	57.321	59.184	-0.01643					135	84	2	0	0	0	0.80706	1	5013	5013		19.36	1.0356	1	207480	+		28196	17245	18875	18885	32013	32013					0.11054336193410563
LIHIYKHK	8	Unmodified	_LIHIYKHK_					0	0	0			REV__ENST00000474543.5_1_20:57564608-57568882:+|nuORF	REV__ENST00000474543.5_1_20:57564608-57568882:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3246459960938	2	526.324194	1050.63383	-0.53497	-0.00028157	1.5071	0.00079323	0.97214	0.00051166	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.80706	1	5205	5205		19.36	1.995	1	220370	+		28197	17245	18875	18885	32014	32014					0.11054336193410563
LIHKECIWSH	10	Unmodified	_LIHKECIWSH_					0	0	0			REV__ENSG00000171988|ENST00000399262|JMJD1C	REV__ENSG00000171988|ENST00000399262|JMJD1C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3289184570312	2	633.326608	1264.63866	-0.016162	-1.0236E-05	1.554	0.00098418	1.5378	0.00097395	633.327060704582	111.14	0.56624	111.14	110.83	111.4	0					38	18	3	0	0	0	0.85939	1	11563	11563		23.042	0.46283	1	45765	+		28198	21793	18876	18886	32015	32015					0.016928522738453466
LIHKRRSRKQL	11	Unmodified	_LIHKRRSRKQL_					0	0	0			REV__ENST00000559454.5_1_15:49462693-49462759:+|nuORF	REV__ENST00000559454.5_1_15:49462693-49462759:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.58782958984375	3	478.975788	1433.90553	-0.33328	-0.00015963	-2.7492	-0.0013168	-3.0825	-0.0014765	479.3088012778064	48.112	1.1462	48.582	48.007	49.153	0.46941					52	28	2	0	0	0	0.17363	1	4691	4691		37.6	18.337	1	280340	+		28199	28747	18877	18887	32016	32016					0.2059369854760007
LIHLCKLD	8	Unmodified	_LIHLCKLD_					0	0	0			REV__ENST00000310078.12_1_2:228421145-228421229:+|nuORF	REV__ENST00000310078.12_1_2:228421145-228421229:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.2995300292969	2	477.775688	953.536823	-0.45613	-0.00021793	4.4446	0.0021235	3.9885	0.0019056	477.77766993350735	30.046	0.70521	30.074	29.833	30.538	0.028618					29	15	3	0	0	0	0.4196	1	1913	1913		29.842	17.635	1	357920	+		28200	24882	18878	18888	32017	32017					0.05819605922113169
LIHLLHLDNY	10	Unmodified	_LIHLLHLDNY_					0	0	0		ENSG00000139865|ENST00000553443|TTC6	ENSG00000139865|ENST00000553443|TTC6	ENSG00000139865|ENST00000553443|TTC6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	625.8466186523438	2	625.84823	1249.68191	0.75678	0.00047363	-3.7853	-0.002369	-3.0285	-0.0018954	625.8458288278665	36.204	0.77826	36.486	36.152	36.931	0.28173					49	18	4	0	0	0	0.85981	1	2842	2842		30.504	0.18592	1	1817100			28201	4401	18879	18889	32018	32018					0.06705365322795842
LIHLLVAGHQ	10	Unmodified	_LIHLLVAGHQ_					0	0	0			REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	REV__nc|ENSG00000140090|Q8NFF2-2|SLC24A4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3388061523438	2	550.832383	1099.65021	-0.18819	-0.00010366	-3.2101	-0.0017683	-3.3983	-0.0018719	550.8304533109934	16.286	0.21682	15.799	15.696	15.913	-0.48718					5	4	2	0	0	0	0.37624	1	120	120		25.45	0	1	43723	+		28202	19595	18880	18890	32019	32019					0.10437417359503343
LIHLPLTTEP	10	Unmodified	_LIHLPLTTEP_					0	0	0		nc|ENSG00000130768|Q92485-2|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3303833007812	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.91594	1	9131	9131		6.7355	0	1	17338000			28203	14908	18881	18891	32020	32020					0.0881915819995811
LIHLVINMH	9	Unmodified	_LIHLVINMH_					0	0	0			REV__nc|ENSG00000110844|Q6NWY9-4|PRPF40B	REV__nc|ENSG00000110844|Q6NWY9-4|PRPF40B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.7750854492188	2	545.315512	1088.61647	0.028304	1.5434E-05	1.7914	0.00097688	1.8197	0.00099232	545.3163961129901	33.805	0.49834	33.975	33.821	34.319	0.16971					21	11	2	0	0	0	0.20789	1	2447	2447		26.796	9.4311	1	341470	+		28204	29775	18882	18892	32021	32021					0.07570672596102668
LIHPKPPTKC	10	Unmodified	_LIHPKPPTKC_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.8316650390625	2	567.328619	1132.64269	1.9149	0.0010864	1.1482	0.00065142	3.0632	0.0017378	567.3293271441571	103.38	0.97102	103.61	103.31	104.28	0.22556					36	23	2	0	0	0	0.74274	1	12578	12578		42.396	5.237	1	586580	+		28205	23536	18883	18893	32022	32022					0.08166941767581193
LIHPTLGRR	9	Unmodified	_LIHPTLGRR_					0	0	0		ENST00000416860.2_2_1:2485669-2486552:-|nuORF	ENST00000416860.2_2_1:2485669-2486552:-|nuORF	ENST00000416860.2_2_1:2485669-2486552:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.81689453125	2	531.830175	1061.6458	1.133	0.00060255	-2.0139	-0.001071	-0.88088	-0.00046848	531.8296388676935	88.148	0.12167	88.2	88.117	88.239	0.051659					4	2	2	0	0	0	0.20789	1	9041	9041		6.7355	0	1	29140			28206	11402	18884	18894	32023	32023					0.11743952936603819
LIHRFLTG	8	Unmodified	_LIHRFLTG_					0	0	0		nc|ENSG00000135439|Q99490|AGAP2;ENSG00000135439|ENST00000547588|AGAP2;nc|ENSG00000135439|Q99490-2|AGAP2	nc|ENSG00000135439|Q99490|AGAP2	nc|ENSG00000135439|Q99490|AGAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.7853088378906	2	478.787444	955.560336	-0.098425	-4.7125E-05	-2.8398	-0.0013597	-2.9382	-0.0014068	478.78530530827464	92.434	2.0709	92.504	91.595	93.666	0.06987					117	48	4	0	0	0	0.89457	1	9558	9558		37.028	1.4102	1	727550			28207	4019	18885	18895	32024	32024					0.08077787750949028
LIHRKAVPGN	10	Unmodified	_LIHRKAVPGN_					0	0	0		ENSG00000183054|ENST00000329516|RGPD6;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000015568|ENST00000016946|RGPD5;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000196862|ENST00000408999|RGPD4;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2	ENSG00000183054|ENST00000329516|RGPD6;ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.833984375	2	552.835457	1103.65636	-0.71064	-0.00039287	-1.5815	-0.00087433	-2.2922	-0.0012672	552.8343973070275	84.083	2.0319	84.083	83.586	85.618	0					122	47	3	0	0	0	0.85466	1	7970	7970		20.947	0	1	300740			28208	5220;825	18886	18896	32025	32025					0.10867935591022615
LIHRLFRRN	9	Unmodified	_LIHRLFRRN_					0	0	0		CON__ENSEMBL:ENSBTAP00000018574	CON__ENSEMBL:ENSBTAP00000018574	CON__ENSEMBL:ENSBTAP00000018574	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.92205810546875	3	408.919391	1223.73634	3.1807	0.0013007	3.8728	0.0015837	7.0536	0.0028843	408.92095568616344	104.57	4.1233	104.61	103.07	107.19	0.039856					288	98	5	0	0	0	0.7932	1	11395	11395		24.519	1.1413	1	4230400		+	28209	566	18887	18897	32026	32026					0.13342421984884822
LIHSLSSKRPK	11	Unmodified	_LIHSLSSKRPK_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.592529296875	3	422.594461	1264.76155	-0.12961	-5.4774E-05	-3.0685	-0.0012967	-3.1981	-0.0013515	422.59301325163335	54.438	1.5298	54.43	53.553	55.082	-0.0077057					142	48	4	0	0	0	0.76892	1	4846	4846		17.833	0.6664	1	1173800	+		28210	22085	18888	18898	32027	32027					0.13976431996798055
LIHSLSSKRPK	11	Unmodified	_LIHSLSSKRPK_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5925598144531	3	422.594461	1264.76155	-1.8117	-0.0007656	-1.6807	-0.00071027	-3.4924	-0.0014759	422.59357864263933	54.504	2.542	54.559	53.757	56.299	0.055611					235	90	4	0	0	0	0.76579	1	4464	4464		18.531	1.3643	1	1177200	+		28211	22085	18888	18898	32028	32028					0.13976431996798055
LIHVPKDLP	9	Unmodified	_LIHVPKDLP_					0	0	0		ENSG00000174130|ENST00000508254|TLR6;nc|ENSG00000174130|Q9Y2C9-2|TLR6	ENSG00000174130|ENST00000508254|TLR6	ENSG00000174130|ENST00000508254|TLR6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.316035	1030.61752	-0.68072	-0.00035146	-3.5737	-0.0018451	-4.2544	-0.0021966	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.7932	1	10406	10406		25.45	0.93098	1	39641000			28212	6909	18889	18899	32029	32029					0.10343210236646883
LIHVPKDLP	9	Unmodified	_LIHVPKDLP_					0	0	0		ENSG00000174130|ENST00000508254|TLR6;nc|ENSG00000174130|Q9Y2C9-2|TLR6	ENSG00000174130|ENST00000508254|TLR6	ENSG00000174130|ENST00000508254|TLR6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3143920898438	2	516.316035	1030.61752	-0.63969	-0.00033028	-3.0425	-0.0015709	-3.6822	-0.0019012	516.3144152653146	102.55	1.0925	102.55	101.98	103.08	0					67	27	3	0	0	0	0.76996	1	10491	10491		33.516	8.0654	1	640710			28213	6909	18889	18899	32030	32030					0.10343210236646883
LIHVPPGC	8	Unmodified	_LIHVPPGC_					0	0	0		ENST00000568636.5_1_16:720997-722003:+|nuORF;ENST00000569358.5_1_16:720997-722561:+|nuORF;ENST00000602564.5_1_16:720997-722561:+|nuORF;ENSG00000140983|ENST00000315082|RHOT2	ENST00000568636.5_1_16:720997-722003:+|nuORF	ENST00000568636.5_1_16:720997-722003:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2395935058594	2	418.228374	834.442194	1.1445	0.00047865	-3.4844	-0.0014573	-2.3399	-0.00097861	418.2268660041269	88.459	1.1882	88.385	88.03	89.218	-0.074005					49	28	2	0	0	0	0.4196	1	9187	9187		16.705	0	1	308050			28214	4470	18890	18900	32031	32031					0.018350921707792622
LIHVPPGC	8	Unmodified	_LIHVPPGC_					0	0	0		ENST00000568636.5_1_16:720997-722003:+|nuORF;ENST00000569358.5_1_16:720997-722561:+|nuORF;ENST00000602564.5_1_16:720997-722561:+|nuORF;ENSG00000140983|ENST00000315082|RHOT2	ENST00000568636.5_1_16:720997-722003:+|nuORF	ENST00000568636.5_1_16:720997-722003:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2396240234375	2	418.228374	834.442194	-1.7919	-0.00074942	-1.9451	-0.00081348	-3.7369	-0.0015629	418.228080012172	88.472	1.7939	88.68	87.893	89.687	0.20731					89	42	3	0	0	0	0.4196	1	8755	8755		33.493	10.45	1	304500			28215	4470	18890	18900	32032	32032					0.018350921707792622
LIHVPPGC	8	Unmodified	_LIHVPPGC_					0	0	0		ENST00000568636.5_1_16:720997-722003:+|nuORF;ENST00000569358.5_1_16:720997-722561:+|nuORF;ENST00000602564.5_1_16:720997-722561:+|nuORF;ENSG00000140983|ENST00000315082|RHOT2	ENST00000568636.5_1_16:720997-722003:+|nuORF	ENST00000568636.5_1_16:720997-722003:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2395935058594	2	418.228374	834.442194	0.62345	0.00026074	-4.3343	-0.0018127	-3.7108	-0.001552	418.2271931027557	88.424	1.9727	88.574	87.941	89.914	0.15055					86	46	3	0	0	0	0.4196	1	8771	8771		10.185	0	1	243500			28216	4470	18890	18900	32033	32033					0.018350921707792622
LIHVPPGC	8	Unmodified	_LIHVPPGC_					0	0	0		ENST00000568636.5_1_16:720997-722003:+|nuORF;ENST00000569358.5_1_16:720997-722561:+|nuORF;ENST00000602564.5_1_16:720997-722561:+|nuORF;ENSG00000140983|ENST00000315082|RHOT2	ENST00000568636.5_1_16:720997-722003:+|nuORF	ENST00000568636.5_1_16:720997-722003:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.24041748046875	2	418.228374	834.442194	-1.8932	-0.00079179	-0.37724	-0.00015777	-2.2704	-0.00094956	418.228174693272	88.346	0.99515	88.515	88.041	89.036	0.16923					40	23	2	0	0	0	0.4196	1	8725	8725		16.705	7.5221	1	233500			28217	4470	18890	18900	32034	32034					0.018350921707792622
LIHVPPGC	8	Unmodified	_LIHVPPGC_					0	0	0		ENST00000568636.5_1_16:720997-722003:+|nuORF;ENST00000569358.5_1_16:720997-722561:+|nuORF;ENST00000602564.5_1_16:720997-722561:+|nuORF;ENSG00000140983|ENST00000315082|RHOT2	ENST00000568636.5_1_16:720997-722003:+|nuORF	ENST00000568636.5_1_16:720997-722003:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.24114990234375	2	418.228374	834.442194	-1.0271	-0.00042958	-2.6637	-0.001114	-3.6908	-0.0015436	418.2277397775164	88.209	1.2466	88.673	88.06	89.306	0.46312					65	30	3	0	0	0	0.4196	1	10448	10448		16.705	0	1	276000			28218	4470	18890	18900	32035	32035					0.018350921707792622
LIIDKKSCV	9	Unmodified	_LIIDKKSCV_					0	0	0			REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80401611328125	2	509.801903	1017.58925	-0.053466	-2.7257E-05	4.4244	0.0022556	4.371	0.0022283	509.80400037204134	99.545	1.2612	99.586	99.14	100.4	0.041107					66	29	3	0	0	0	0.76255	1	10584	10584		35.618	0.46626	1	418130	+		28219	29869	18891	18901	32036	32036					0.08116144265068215
LIIDKYNLL	9	Unmodified	_LIIDKYNLL_					0	0	0			REV__ENST00000558945.5_1_15:41590339-41590513:+|nuORF	REV__ENST00000558945.5_1_15:41590339-41590513:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3181762695312	2	552.8368	1103.65905	-0.64478	-0.00035646	-4.2977	-0.0023759	-4.9425	-0.0027324	552.8344914625301	80.974	0.89912	81.395	80.976	81.875	0.4215					31	21	2	0	0	0	0.20789	1	9356	9356		24.203	0	1	100690	+		28220	28742	18892	18902	32037	32037					0.11136346205330483
LIIDRRDT	8	Unmodified	_LIIDRRDT_					0	0	0		ENST00000382357.3_1_21:34398244-34398298:+|nuORF	ENST00000382357.3_1_21:34398244-34398298:+|nuORF	ENST00000382357.3_1_21:34398244-34398298:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.291015625	2	501.290548	1000.56654	2.5474	0.001277	-2.2268	-0.0011163	0.32064	0.00016074	501.28923830834384	99.451	1.7073	99.397	98.735	100.44	-0.053741					93	39	4	0	0	0	0.89494	1	10757	10757		37.159	4.3467	1	1105700			28221	10974	18893	18903	32038	32038					0.06628261191792717
LIIDRRDT	8	Unmodified	_LIIDRRDT_					0	0	0		ENST00000382357.3_1_21:34398244-34398298:+|nuORF	ENST00000382357.3_1_21:34398244-34398298:+|nuORF	ENST00000382357.3_1_21:34398244-34398298:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29034423828125	2	501.290548	1000.56654	0.79117	0.00039661	-0.56207	-0.00028176	0.2291	0.00011485	501.2901383421254	99.319	1.3116	99.476	99.033	100.34	0.15659					65	30	3	0	0	0	0.87064	1	10343	10343		29.15	1.2673	1	683540			28222	10974	18893	18903	32039	32039					0.06628261191792717
LIIEKLLIA	9	Unmodified	_LIIEKLLIA_					0	0	0			REV__ENSG00000139629|ENST00000356317|GALNT6;REV__ENSG00000115339|ENST00000392701|GALNT3	REV__ENSG00000139629|ENST00000356317|GALNT6	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3529663085938	2	513.352086	1024.68962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.364	1	24.423	23.923	24.923	0.058167								0	0	0	0.33676	1	839	839		18.324	0.95945	1		+		28223	19556;18111	18894	18904	32040	32040					0.1782612459039683
LIIFLFVEV	9	Unmodified	_LIIFLFVEV_					0	0	0			REV__ENST00000521508.1_1_13:52586574-52593168:+|nuORF	REV__ENST00000521508.1_1_13:52586574-52593168:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.8410034179688	2	546.838811	1091.66307	0.19665	0.00010754	1.2699	0.00069442	1.4665	0.00080195	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.7932	1	10773	10773		24.203	0	1	55511000	+		28224	28121	18895	18905	32041	32041					0.12090435699042246
LIIFPPLV	8	Unmodified	_LIIFPPLV_					0	0	0		ENSG00000188324|ENST00000358433|OR6C6	ENSG00000188324|ENST00000358433|OR6C6	ENSG00000188324|ENST00000358433|OR6C6	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.79083251953125	2	456.301865	910.589176	-1.7242	-0.00078677	-0.3569	-0.00016285	-2.0811	-0.00094963	456.3016038696369	49.826	1.7607	49.826	48.973	50.734	0					72	41	2	0	0	0	0.4196	1	3903	3903		24.504	0	1	103850			28225	7922	18896	18906	32042	32042					0.1303051232737289
LIIFRMVQSA	10	Unmodified	_LIIFRMVQSA_					0	0	0			REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3432006835938	2	589.341726	1176.6689	0.71715	0.00042265	1.778	0.0010479	2.4952	0.0014705	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.82886	1	10863	10863		37.812	14.289	1	2439600	+		28226	26872	18897	18907	32043	32043					0.08763210939082455
LIIFRMVQSA	10	Unmodified	_LIIFRMVQSA_					0	0	0			REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3436279296875	2	589.341726	1176.6689	-0.63668	-0.00037522	3.1391	0.00185	2.5025	0.0014748	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.8651	1	10915	10915		25.574	1.3422	1	2236100	+		28227	26872	18897	18907	32044	32044					0.08763210939082455
LIIFRMVQSA	10	Unmodified	_LIIFRMVQSA_					0	0	0			REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3435668945312	2	589.341726	1176.6689	0.15554	9.1664E-05	1.9962	0.0011764	2.1517	0.0012681	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.80179	2	11505	11505;11601		39.253	1.1477	1	10540000	+		28228	26872	18897	18907	32045;32046	32045					0.08763210939082455
LIIFTIKANS	10	Unmodified	_LIIFTIKANS_					0	0	0		nc|ENSG00000130303|Q10589-2|BST2;ENSG00000130303|ENST00000252593|BST2	nc|ENSG00000130303|Q10589-2|BST2	nc|ENSG00000130303|Q10589-2|BST2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3407592773438	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.85466	1	12260	12260		20.947	1.8434	1	4071000			28229	3633	18898	18908	32047	32047					0.1153574857962667
LIIIPVLVV	9	Unmodified	_LIIIPVLVV_					0	0	0		ENSG00000185201|ENST00000616316|IFITM2;ENST00000527146.1_2_11:308871-309162:+|nuORF	ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.8523864746094	2	489.851722	977.68889	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.49	1	74.533	74.033	75.033	0.0429								0	0	0	0.32542	1	7128	7128		21.702	7.0382	1				28230	7687	18899	18909	32048	32048					0.19915329941329674
LIIITLFAK	9	Unmodified	_LIIITLFAK_					0	0	0			REV__nc|ENSG00000075790|Q9UHQ4-2|BCAP29	REV__nc|ENSG00000075790|Q9UHQ4-2|BCAP29	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8287963867188	2	516.346803	1030.67905	-0.043615	-2.2521E-05	-0.18147	-9.3701E-05	-0.22508	-0.00011622	516.3465052958334	82.964	0.4472	83.395	83.212	83.659	0.43108					16	10	2	0	0	0	0.20789	1	9649	9649		34.173	26.482	1	466630	+		28231	29711	18900	18910	32049	32049					0.16494141935936568
LIIKDLGEIHS	11	Unmodified	_LIIKDLGEIHS_					0	0	0		nc|ENSG00000188428|Q8TDH9-2|BLOC1S5;ENSG00000188428|ENST00000397457|BLOC1S5	nc|ENSG00000188428|Q8TDH9-2|BLOC1S5	nc|ENSG00000188428|Q8TDH9-2|BLOC1S5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7671203613281	3	413.243206	1236.70779	-0.58954	-0.00024362	-4.2794	-0.0017684	-4.869	-0.0020121	413.57543667721563	39.699	0.4207	40.067	39.813	40.233	0.36797					13	9	2	0	0	0	0.17404	1	3359	3359		23.378	4.1152	1	50626			28232	7929	18901	18911	32050	32050					0.09890214774418382
LIIKEIIHAS	10	Unmodified	_LIIKEIIHAS_					0	0	0			REV__ENST00000345990.8_2_5:122847977-122881201:+|nuORF	REV__ENST00000345990.8_2_5:122847977-122881201:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8536376953125	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.86718	1	10841	10841		27.882	1.1893	1	34546000	+		28233	25317	18902	18912	32051	32051					0.1340743747095985
LIIKEIIHAS	10	Unmodified	_LIIKEIIHAS_					0	0	0			REV__ENST00000345990.8_2_5:122847977-122881201:+|nuORF	REV__ENST00000345990.8_2_5:122847977-122881201:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8515014648438	2	568.855524	1135.69649	-0.35573	-0.00020236	-3.0084	-0.0017113	-3.3641	-0.0019137	568.8537210066357	105.99	1.5144	105.99	105.37	106.89	0					65	34	2	0	0	0	0.85466	1	11057	11057		20.947	0.95016	1	402380	+		28234	25317	18902	18912	32052	32052					0.1340743747095985
LIIKEIIHAS	10	Unmodified	_LIIKEIIHAS_					0	0	0			REV__ENST00000345990.8_2_5:122847977-122881201:+|nuORF	REV__ENST00000345990.8_2_5:122847977-122881201:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8539428710938	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.85934	1	11377	11377		35.618	7.736	1	50786000	+		28235	25317	18902	18912	32053	32053					0.1340743747095985
LIIKNPPIN	9	Unmodified	_LIIKNPPIN_					0	0	0			REV__ENST00000507760.5_1_4:25363540-25366888:+|nuORF	REV__ENST00000507760.5_1_4:25363540-25366888:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.327880859375	2	511.32386	1020.63317	2.4721	0.001264	3.8453	0.0019662	6.3174	0.0032303	511.3257127043103	97.291	2.1515	97.235	96.802	98.953	-0.055542					136	49	4	0	0	0	0.78058	1	10434	10434		30.504	0.6621	1	1837000	+		28236	21469	18903	18913	32054	32054					0.12367496753711293
LIIKRVGA	8	Unmodified	_LIIKRVGA_					0	0	0			REV__ENSG00000047188|ENST00000161863|YTHDC2	REV__ENSG00000047188|ENST00000161863|YTHDC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.30023193359375	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.86294	1	7163	7163		8.8223	0	1	1702600	+		28237	16347	18904	18914	32055	32055					0.14627262273370434
LIIKSPTT	8	Unmodified	_LIIKSPTT_					0	0	0			REV__L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|130|3|sense	REV__L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|130|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7747802734375	2	436.776211	871.537869	-0.16229	-7.0884E-05	-2.9337	-0.0012814	-3.096	-0.0013523	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.85277	1	9505	9505		25.45	0	1	15341000	+		28238	29498	18905	18915	32056	32056					0.09696143562666748
LIILFYMR	8	Unmodified	_LIILFYMR_					0	0	0			REV__ENST00000489973.6_1_13:111545392-111545482:-|nuORF	REV__ENST00000489973.6_1_13:111545392-111545482:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.7918701171875	2	534.817356	1067.62016	0.5649	0.00030212	3.2808	0.0017546	3.8457	0.0020567	534.8205970880339	16.134	0.20825	15.646	15.571	15.779	-0.48718					5	4	2	0	0	0	0.4196	1	108	108		35.201	1.6851	1	9897	+		28239	27629	18906	18916	32057	32057					0.08905342369939717
LIILRKKHL	9	Unmodified	_LIILRKKHL_					0	0	0		nc|ENSG00000151490|Q16827-4|PTPRO;nc|ENSG00000151490|Q16827-3|PTPRO;nc|ENSG00000151490|Q16827-2|PTPRO;ENSG00000151490|ENST00000281171|PTPRO	nc|ENSG00000151490|Q16827-4|PTPRO	nc|ENSG00000151490|Q16827-4|PTPRO	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3299560546875	2	567.397693	1132.78083	1.496	0.00084885	1.5205	0.00086274	3.0166	0.0017116	567.3989189163261	92.174	0.25774	92.219	92.025	92.283	0.045448					6	5	2	0	0	0	0.20789	1	9611	9611		3.6843	0	1	32389			28240	5121	18907	18917	32058	32058					0.21975433078364404
LIIMTLFM	8	Unmodified	_LIIMTLFM_					0	0	0			REV__ENSG00000118322|ENST00000327245|ATP10B	REV__ENSG00000118322|ENST00000327245|ATP10B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.2925109863281	2	491.279218	980.543882	-0.66091	-0.00032469	-1.5086	-0.00074115	-2.1695	-0.0010658	491.2788648274982	81.85	1.0116	81.995	81.446	82.457	0.14513					42	23	3	0	0	0	0.4196	1	7812	7812		20.482	0	1	79042	+		28241	18304	18908	18918	32059	32059					0.052832024783356246
LIINHIRF	8	Unmodified	_LIINHIRF_					0	0	0		ENST00000509525.5_1_5:132534789-132560973:-|nuORF;nc|ENSG00000053108|Q6MZW2-2|FSTL4;ENSG00000053108|ENST00000265342|FSTL4	ENST00000509525.5_1_5:132534789-132560973:-|nuORF	ENST00000509525.5_1_5:132534789-132560973:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3170776367188	2	513.316369	1024.61818	0.20062	0.00010298	0.52173	0.00026781	0.72235	0.00037079	513.3165818286456	46.69	1.0794	46.676	46.276	47.355	-0.013821					47	28	2	0	0	0	0.86791	1	3766	3766		28.254	6.5519	1	139720			28242	12992	18909	18919	32060	32060					0.10686049676360199
LIIPPRARLVK	11	Unmodified	_LIIPPRARLVK_					0	0	0		ENST00000305623.12_1_10:5327839-5330384:-|nuORF	ENST00000305623.12_1_10:5327839-5330384:-|nuORF	ENST00000305623.12_1_10:5327839-5330384:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.2467346191406	3	425.958963	1274.85506	0.83439	0.00035542	-0.35341	-0.00015054	0.48098	0.00020488	425.9587268832814	85.783	1.8136	85.71	84.583	86.397	-0.073761					53	41	2	0	0	0	0.17863	1	8689	8689		6.001	0	1	31980			28243	9850	18910	18920	32061	32061					0.2286277616985899
LIIPPRARLVK	11	Unmodified	_LIIPPRARLVK_					0	0	0		ENST00000305623.12_1_10:5327839-5330384:-|nuORF	ENST00000305623.12_1_10:5327839-5330384:-|nuORF	ENST00000305623.12_1_10:5327839-5330384:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.6312561035156	3	425.958963	1274.85506	-1.7162	-0.00073104	1.8756	0.00079893	0.15938	6.7889E-05	425.959655831811	83.33	1.2033	83.495	82.846	84.049	0.1651					35	27	2	0	0	0	0.18066	1	7983	7983		6.001	2.7897	1	63603			28244	9850	18910	18920	32062	32062					0.2286277616985899
LIIPPRARLVK	11	Unmodified	_LIIPPRARLVK_					0	0	0		ENST00000305623.12_1_10:5327839-5330384:-|nuORF	ENST00000305623.12_1_10:5327839-5330384:-|nuORF	ENST00000305623.12_1_10:5327839-5330384:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	425.958963	1274.85506	0.57841	0.00024638	-0.19922	-8.4859E-05	0.37919	0.00016152	425.9586055594276	83.206	0.90224	83.353	83.142	84.045	0.14694	-0.056926	-0.0016981	NaN	3.026	31	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38963			28245	9850	18910	18920							0.2286277616985899
LIIPPRARLVK	11	Unmodified	_LIIPPRARLVK_					0	0	0		ENST00000305623.12_1_10:5327839-5330384:-|nuORF	ENST00000305623.12_1_10:5327839-5330384:-|nuORF	ENST00000305623.12_1_10:5327839-5330384:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	425.958963	1274.85506	-1.689	-0.00071946	2.7069	0.001153	1.0179	0.00043359	425.9598606843029	83.192	0.25311	83.33	83.099	83.352	0.13811	-0.079536	0.0020156	NaN	3.026	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35402			28246	9850	18910	18920							0.2286277616985899
LIIPSGPK	8	Unmodified	_LIIPSGPK_					0	0	0			REV__ENSG00000076356|ENST00000367033|PLXNA2	REV__ENSG00000076356|ENST00000367033|PLXNA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.76702880859375	2	412.765646	823.516739	1.2488	0.00051545	2.3587	0.00097359	3.6075	0.001489	412.7664969922496	36.891	1.9427	37.376	36.231	38.174	0.48581					136	47	4	0	0	0	0.87479	1	2974	2974		30.504	0.6621	1	3061300	+		28247	16725	18911	18921	32063	32063					0.09792178253815109
LIIQPRSSN	9	Unmodified	_LIIQPRSSN_					0	0	0		ENST00000540818.5_1_12:10531279-10532321:-|nuORF	ENST00000540818.5_1_12:10531279-10532321:-|nuORF	ENST00000540818.5_1_12:10531279-10532321:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.2978515625	2	514.298373	1026.58219	-0.049414	-2.5414E-05	-0.17674	-9.0897E-05	-0.22615	-0.00011631	514.2983333190766	96.625	2.0478	96.687	95.464	97.512	0.062225					95	47	3	0	0	0	0.7932	1	10176	10176		26.693	1.1189	1	523750			28248	13509	18912	18922	32064	32064					0.0699654770885445
LIIRNYKPHR	10	Unmodified	_LIIRNYKPHR_					0	0	0			REV__ENST00000290968.4_7:142478839-142482361:+|nuORF	REV__ENST00000290968.4_7:142478839-142482361:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2681579589844	3	437.266568	1308.77787	-1.0896	-0.00047642	3.9608	0.0017319	2.8713	0.0012555	437.2682076309449	48.376	1.4718	48.845	48.119	49.591	0.46941					123	36	4	0	0	0	0.85259	1	4710	4710		20.03	0.40354	1	3096400	+		28249	24664	18913	18923	32065	32065					0.13583557953529635
LIIRRLHK	8	Unmodified	_LIIRRLHK_					0	0	0		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.82666015625	2	524.858735	1047.70292	-0.63646	-0.00033405	-4.2173	-0.0022135	-4.8538	-0.0025475	524.8560384523159	99.739	0.16656	99.739	99.635	99.801	0					5	3	2	0	0	0	0.4196	1	10079	10079		14.664	0	1	29960			28250	1442;3511	18914	18924	32066	32066					0.18097420212984616
LIISGIYLF	9	Unmodified	_LIISGIYLF_					0	0	0		ENSG00000155380|ENST00000369626|SLC16A1	ENSG00000155380|ENST00000369626|SLC16A1	ENSG00000155380|ENST00000369626|SLC16A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.818359375	2	519.815336	1037.61612	1.8559	0.00096475	3.6573	0.0019011	5.5132	0.0028659	519.8171404866895	95.918	1.5206	96.339	95.506	97.027	0.42051					101	36	3	0	0	0	0.5393	1	11501	11501		50.025	7.5501	1	1896300			28251	5322	18915	18925	32067	32067					0.09881576147881788
LIISMLGPTT	10	Unmodified	_LIISMLGPTT_					0	0	0			REV__ENST00000295756.10_1_3:108549606-108565961:+|nuORF	REV__ENST00000295756.10_1_3:108549606-108565961:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3035888671875	2	523.301736	1044.58892	1.1688	0.00061163	2.3066	0.0012071	3.4754	0.0018187	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.85934	1	9337	9337		35.618	1.4457	1	12580000	+		28252	24701	18916	18926	32068	32068					0.06840724545213561
LIISVLYSLI	10	Unmodified	_LIISVLYSLI_					0	0	0			REV__ENST00000219400.7_1_16:81009893-81009938:-|nuORF	REV__ENST00000219400.7_1_16:81009893-81009938:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3628540039062	2	567.36265	1132.71075	0.15466	8.7749E-05	1.5374	0.00087224	1.692	0.00095999	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.85934	1	3088	3088		35.618	5.1146	1	1937600	+		28253	24147	18917	18927	32069	32069					0.1497008989922506
LIISVLYSLI	10	Unmodified	_LIISVLYSLI_					0	0	0			REV__ENST00000219400.7_1_16:81009893-81009938:-|nuORF	REV__ENST00000219400.7_1_16:81009893-81009938:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3626708984375	2	567.36265	1132.71075	-1.4485	-0.00082182	2.3813	0.001351	0.93278	0.00052922	567.3639779227798	42.372	2.1865	42.806	41.562	43.749	0.4334					145	55	5	0	0	0	0.86589	1	3844	3844		29.15	6.1071	1	13610000	+		28254	24147	18917	18927	32070	32070					0.1497008989922506
LIITHIPKN	9	Unmodified	_LIITHIPKN_					0	0	0			REV__nc|ENSG00000145349|Q13557-8|CAMK2D	REV__nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8268432617188	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.77546	1	10067	10067		31.955	2.8053	1	15330000	+		28255	19940	18918	18928	32071	32071					0.12214899127980061
LIITHIPKN	9	Unmodified	_LIITHIPKN_					0	0	0			REV__nc|ENSG00000145349|Q13557-8|CAMK2D	REV__nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.82666015625	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.78058	3	10255	10219;10255;10399		30.504	6.3009	1	23918000	+		28256	19940	18918	18928	32072;32073;32074	32073					0.12214899127980061
LIITPDSSHQN	11	Unmodified	_LIITPDSSHQN_					0	0	0		ENSG00000164603|ENST00000297145|BMT2	ENSG00000164603|ENST00000297145|BMT2	ENSG00000164603|ENST00000297145|BMT2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.8793334960938	2	612.814584	1223.61462	-0.38913	-0.00023846	-4.0562	-0.0024857	-4.4453	-0.0027241	612.8107735331074	104.74	0.65852	104.72	104.37	105.03	-0.014809					20	15	2	0	0	0	0.17226	1	11301	11301		42.864	10.052	1	240990			28257	5978	18919	18929	32075	32075					0.011752903212027377
LIIVQRQDKLN	11	Unmodified	_LIIVQRQDKLN_					0	0	0		ENSG00000112218|ENST00000229955|GPR63;ENSG00000135973|ENST00000258456|GPR45	ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	447.27374267578125	3	447.273388	1338.79833	1.5068	0.00067396	-2.5991	-0.0011625	-1.0922	-0.00048853	447.2721343487067	107.14	1.0643	107.17	106.58	107.65	0.035622					102	24	6	0	0	0	0.72374	1	11784	11784		27.644	3.4121	1	9102100			28258	2641	18920	18930	32076	32076					0.14248683822711428
LIIVQRQDKLN	11	Unmodified	_LIIVQRQDKLN_					0	0	0		ENSG00000112218|ENST00000229955|GPR63;ENSG00000135973|ENST00000258456|GPR45	ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2738342285156	3	447.273388	1338.79833	-1.2893	-0.00057667	-0.045837	-2.0502E-05	-1.3351	-0.00059717	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.74405	1	11552	11552		23.378	1.5975	1	31263000			28259	2641	18920	18930	32077	32077					0.14248683822711428
LIIVQRQDKLN	11	Unmodified	_LIIVQRQDKLN_					0	0	0		ENSG00000112218|ENST00000229955|GPR63;ENSG00000135973|ENST00000258456|GPR45	ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2734680175781	3	447.273388	1338.79833	-1.2894	-0.00057671	-0.33363	-0.00014922	-1.623	-0.00072593	447.27316892355236	107.81	0.50114	107.95	107.57	108.07	0.13866					44	12	5	0	0	0	0.76579	1	11576	11576		18.531	0.69791	1	39114000			28260	2641	18920	18930	32078	32078					0.14248683822711428
LIIVQRQDKLN	11	Unmodified	_LIIVQRQDKLN_					0	0	0		ENSG00000112218|ENST00000229955|GPR63;ENSG00000135973|ENST00000258456|GPR45	ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.27508544921875	3	447.273388	1338.79833	-1.7854	-0.00079855	1.2257	0.00054822	-0.55967	-0.00025032	447.27387124439326	107.85	0.39288	107.89	107.58	107.97	0.036125					35	9	5	0	0	0	0.74771	1	11508	11508		22.562	1.5294	1	27978000			28261	2641	18920	18930	32079	32079					0.14248683822711428
LIIYFLLAVI	10	Unmodified	_LIIYFLLAVI_					0	0	0		ENSG00000169777|ENST00000382492|TAS2R1	ENSG00000169777|ENST00000382492|TAS2R1	ENSG00000169777|ENST00000382492|TAS2R1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3426513671875	2	589.383386	1176.75222	0.81275	0.00047902	-0.28736	-0.00016936	0.52539	0.00030966	589.3828288114506	92.293	0.21234	92.452	92.284	92.496	0.15875					5	4	2	0	0	0	0.37624	1	9344	9344		12.959	0	1	34947			28262	6523	18921	18931	32080	32080					0.1709127065857956
LIIYFVLLLT	10	Unmodified	_LIIYFVLLLT_					0	0	0		nc|ENSG00000290724|O14609|XKRY	nc|ENSG00000290724|O14609|XKRY	nc|ENSG00000290724|O14609|XKRY	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3663940429688	2	604.388668	1206.76278	3.2045	0.0019367	-3.3421	-0.0020199	-0.13758	-8.3153E-05	604.386961360761	104.9	0.53616	104.86	104.65	105.19	-0.04039					20	12	3	0	0	0	0.37624	1	11522	11522		24.203	0	1	463340			28263	15341	18922	18932	32081	32081					0.1676725331299167
LIIYFVLLLT	10	Unmodified	_LIIYFVLLLT_					0	0	0		nc|ENSG00000290724|O14609|XKRY	nc|ENSG00000290724|O14609|XKRY	nc|ENSG00000290724|O14609|XKRY	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2467956542969	3	403.261538	1206.76278	-1.9286	-0.00077774	-1.6654	-0.00067158	-3.594	-0.0014493	403.2609541045312	104.63	0.11683	104.73	104.67	104.79	0.093857					4	2	2	0	0	0	0.37624	1	11062	11062		28.081	15.124	1	52314			28264	15341	18922	18932	32082	32082					0.1676725331299167
LIIYNFGMVLL	11	Unmodified	_LIIYNFGMVLL_					0	0	0		ENSG00000118402|ENST00000369816|ELOVL4	ENSG00000118402|ENST00000369816|ELOVL4	ENSG00000118402|ENST00000369816|ELOVL4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5977478027344	3	432.585915	1294.73592	-1.5731	-0.00068048	-1.6196	-0.00070063	-3.1927	-0.0013811	432.58524502115455	105.94	0.27426	106.09	105.87	106.15	0.14843					12	6	3	0	0	0	0.17537	1	11306	11306		20.03	0	1	318110			28265	3026	18923	18933	32083	32083					0.10033821430170065
LIIYSFVF	8	Unmodified	_LIIYSFVF_					0	0	0		ENSG00000156298|ENST00000378482|TSPAN7;chrX:38561627-38646262|25|12.32|0.5|4.64|+|ENST00000286824|TSPAN7,TSPAN7	ENSG00000156298|ENST00000378482|TSPAN7	ENSG00000156298|ENST00000378482|TSPAN7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2901916503906	2	501.288954	1000.56336	-1.4828	-0.00074334	4.3176	0.0021644	2.8347	0.001421	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.92176	1	8267	8267		46.766	7.7449	1	2793500			28266	550	18924	18934	32084	32084					0.06309618085094826
LIKALFFLCKS	11	Unmodified	_LIKALFFLCKS_					0	0	0		ENST00000253925.11_1_11:70229949-70230129:+|nuORF	ENST00000253925.11_1_11:70229949-70230129:+|nuORF	ENST00000253925.11_1_11:70229949-70230129:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8826293945312	2	641.883227	1281.7519	2.6248	0.0016848	-3.812	-0.0024469	-1.1872	-0.00076207	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.75921	1	11665	11665		19.997	0.89325	1	4455800			28267	9318	18925	18935	32085	32085					0.12229527667068396
LIKALTFLTSD	11	Unmodified	_LIKALTFLTSD_					0	0	0			REV__ENST00000498636.1_1_X:55035677-55046849:-|nuORF	REV__ENST00000498636.1_1_X:55035677-55046849:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3524780273438	2	611.358096	1220.70164	-0.40504	-0.00024762	-2.2662	-0.0013854	-2.6712	-0.0016331	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.72106	1	10240	10240		28.081	0	1	12417000	+		28268	20614	18926	18936	32086	32086					0.10011696542892423
LIKDLLNALP	10	Unmodified	_LIKDLLNALP_					0	0	0		nc|ENSG00000138802|O95487-2|SEC24B;ENSG00000138802|ENST00000265175|SEC24B;nc|ENSG00000138802|O95487-3|SEC24B	nc|ENSG00000138802|O95487-2|SEC24B	nc|ENSG00000138802|O95487-2|SEC24B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.352783203125	2	555.350074	1108.6856	3.1602	0.001755	2.6303	0.0014608	5.7905	0.0032158	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.85939	1	11087	11087		23.042	1.0826	1	5616800			28269	4337	18927	18937	32087	32087					0.13560035096656975
LIKEEVVD	8	Unmodified	_LIKEEVVD_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.77886962890625	2	472.768583	943.522613	-0.71812	-0.00033951	-1.9848	-0.00093834	-2.7029	-0.0012779	472.7674192070631	81.928	0.5502	82.428	82.188	82.738	0.49967					25	13	2	0	0	0	0.4196	1	9524	9524		30.504	0	1	150620	+		28270	16310	18928	18938	32088	32088					0.048592319748081536
LIKEVLSKTY	10	Unmodified	_LIKEVLSKTY_					0	0	0			REV__ENSG00000134827|ENST00000257264|TCN1	REV__ENSG00000134827|ENST00000257264|TCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.3592529296875	2	597.360639	1192.70673	-1.2979	-0.00077532	-3.0365	-0.0018139	-4.3344	-0.0025892	597.3583970456502	100.18	2.7493	100.35	98.666	101.42	0.17199					156	64	4	0	0	0	0.86218	1	10473	10473		32.812	7.2384	1	2737400	+		28271	19170	18929	18939	32089	32089					0.11808000405517305
LIKFKNVLT	9	Unmodified	_LIKFKNVLT_					0	0	0		ENSG00000162753|ENST00000367714|SLC9C2	ENSG00000162753|ENST00000367714|SLC9C2	ENSG00000162753|ENST00000367714|SLC9C2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3270874023438	2	538.347335	1074.68012	3.3809	0.0018201	2.2385	0.0012051	5.6194	0.0030252	538.3490507014899	100.78	0.17501	100.73	100.58	100.75	-0.052116					6	3	2	0	0	0	0.20789	1	10929	10929		12.207	0	1	123960			28272	5731	18930	18940	32090	32090					0.14576356304837645
LIKFKRKFTRR	11	Unmodified	_LIKFKRKFTRR_					0	0	0			REV__ENSG00000174405|ENST00000442234|LIG4	REV__ENSG00000174405|ENST00000442234|LIG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.6553649902344	3	498.324417	1491.95142	-1.2571	-0.00062643	-4.0481	-0.0020173	-5.3052	-0.0026437	498.32235621557885	49.598	1.5877	49.602	48.709	50.297	0.0035934					98	35	4	0	0	0	0.79224	1	4237	4237		12.957	3.7457	1	206420	+		28273	21990	18931	18941	32091	32091					0.22512343729817985
LIKFKRKFTRR	11	Unmodified	_LIKFKRKFTRR_					0	0	0			REV__ENSG00000174405|ENST00000442234|LIG4	REV__ENSG00000174405|ENST00000442234|LIG4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8036804199219	3	498.324417	1491.95142	-1.3021	-0.00064888	-3.5028	-0.0017455	-4.8049	-0.0023944	498.6569960452503	50.733	1.4211	50.741	50.213	51.634	0.0077438					99	40	3	0	0	0	0.18238	1	4443	4443		9.2118	0.41249	1	283520	+		28274	21990	18931	18941	32092	32092					0.22512343729817985
LIKFKRKFTRR	11	Unmodified	_LIKFKRKFTRR_					0	0	0			REV__ENSG00000174405|ENST00000442234|LIG4	REV__ENSG00000174405|ENST00000442234|LIG4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.3036804199219	3	498.324417	1491.95142	-0.61387	-0.00030591	-4.1882	-0.0020871	-4.8021	-0.002393	498.32217932763825	50.906	1.1069	50.941	50.404	51.511	0.034584					72	33	3	0	0	0	0.18304	1	4098	4098		3.4087	0.19739	1	279180	+		28275	21990	18931	18941	32093	32093					0.22512343729817985
LIKFLALGDSG	11	Unmodified	_LIKFLALGDSG_					0	0	0		nc|ENSG00000069974|P51159-2|RAB27A;ENSG00000069974|ENST00000336787|RAB27A	nc|ENSG00000069974|P51159-2|RAB27A	nc|ENSG00000069974|P51159-2|RAB27A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3305053710938	2	567.331882	1132.64921	-1.3958	-0.00079187	-1.9112	-0.0010843	-3.3069	-0.0018761	567.3306768153905	113.32	5.91	113.27	113.24	119.15	-0.044777					245	138	3	0	0	0	0.7342	1	12515	12515		25.574	5.5773	1	1691900			28276	1228	18932	18942	32094	32094					0.08819158199935373
LIKHYNCGDLS	11	Unmodified	_LIKHYNCGDLS_					0	0	0		ENSG00000269113|ENST00000606738|TRABD2B;ENST00000460991.1_1_2:85066267-85069119:-|nuORF;ENST00000435576.2_1_1:48241052-48459876:-|nuORF;ENSG00000186854|ENST00000409520|TRABD2A	ENSG00000269113|ENST00000606738|TRABD2B	ENSG00000269113|ENST00000606738|TRABD2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	632.2966918945312	2	631.81353	1261.61251	-0.60368	-0.00038141	1.8872	0.0011923	1.2835	0.00081093	631.8147741918754	41.604	0.3703	42.238	42.06	42.43	0.6339					19	9	3	0	0	0	0.17347	1	3653	3653		22.58	0.89391	1	483310			28277	8967	18933	18943	32095	32095					-0.007834616882519185
LIKIDPAL	8	Unmodified	_LIKIDPAL_					0	0	0		nc|ENSG00000019991|P14210-3|HGF;ENSG00000019991|ENST00000222390|HGF;nc|ENSG00000019991|P14210-6|HGF;nc|ENSG00000019991|P14210-5|HGF;nc|ENSG00000019991|P14210-2|HGF;nc|ENSG00000019991|P14210-4|HGF	nc|ENSG00000019991|P14210-3|HGF	nc|ENSG00000019991|P14210-3|HGF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78839111328125	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.82464	1	2895	2895		21.702	1.2205	1	9571700			28278	841	18934	18944	32096	32096					0.11308733942325944
LIKIERTGNR	10	Unmodified	_LIKIERTGNR_					0	0	0			REV__chr12:4654841-4657748|17|10.35|0.0|19.98|+|1|None,NDUFA9|2	REV__chr12:4654841-4657748|17|10.35|0.0|19.98|+|1|None,NDUFA9|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.9156494140625	3	400.578811	1198.7146	3.1805	0.001274	0.74448	0.00029822	3.925	0.0015723	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.85979	2	12472	12412;12472		35.178	13.492	1	4827300	+		28279	15531	18935	18945	32097;32098	32098					0.12319572445653648
LIKIERTGNR	10	Unmodified	_LIKIERTGNR_					0	0	0			REV__chr12:4654841-4657748|17|10.35|0.0|19.98|+|1|None,NDUFA9|2	REV__chr12:4654841-4657748|17|10.35|0.0|19.98|+|1|None,NDUFA9|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.580322265625	3	400.578811	1198.7146	0.73398	0.00029402	3.6058	0.0014444	4.3398	0.0017384	400.58019198099043	112.22	0.2012	112.29	112.11	112.31	0.066025					17	6	3	0	0	0	0.86409	1	12078	12078		25.126	1.7481	1	433760	+		28280	15531	18935	18945	32099	32099					0.12319572445653648
LIKIERTGNR	10	Unmodified	_LIKIERTGNR_					0	0	0			REV__chr12:4654841-4657748|17|10.35|0.0|19.98|+|1|None,NDUFA9|2	REV__chr12:4654841-4657748|17|10.35|0.0|19.98|+|1|None,NDUFA9|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5799255371094	3	400.578811	1198.7146	3.4037	0.0013634	1.0118	0.0004053	4.4155	0.0017688	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.86409	1	13568	13568		25.126	3.3456	1	5321000	+		28281	15531	18935	18945	32100	32100					0.12319572445653648
LIKIERTGNR	10	Unmodified	_LIKIERTGNR_					0	0	0			REV__chr12:4654841-4657748|17|10.35|0.0|19.98|+|1|None,NDUFA9|2	REV__chr12:4654841-4657748|17|10.35|0.0|19.98|+|1|None,NDUFA9|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.9168701171875	3	400.578811	1198.7146	5.5422	0.0022201	-1.1276	-0.00045168	4.4147	0.0017684	400.57823953214853	111.56	0.41818	111.59	111.28	111.7	0.033821					36	15	3	0	0	0	0.86207	2	13519	13519;13526		24.232	0.85391	1	3141200	+		28282	15531	18935	18945	32101;32102	32101					0.12319572445653648
LIKIERTGNR	10	Unmodified	_LIKIERTGNR_					0	0	0			REV__chr12:4654841-4657748|17|10.35|0.0|19.98|+|1|None,NDUFA9|2	REV__chr12:4654841-4657748|17|10.35|0.0|19.98|+|1|None,NDUFA9|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.58050537109375	3	400.578811	1198.7146	5.5428	0.0022203	-1.2854	-0.00051489	4.2574	0.0017054	400.57819432887953	111.82	0.52379	111.85	111.7	112.22	0.032707					48	18	4	0	0	0	0.85979	1	13559	13559		35.178	5.6275	1	3019100	+		28283	15531	18935	18945	32103	32103					0.12319572445653648
LIKKAGDGSK	10	Unmodified	_LIKKAGDGSK_					0	0	0		ENSG00000077549|ENST00000264202|CAPZB;nc|ENSG00000077549|P47756-1|CAPZB	ENSG00000077549|ENST00000264202|CAPZB	ENSG00000077549|ENST00000264202|CAPZB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.3107604980469	2	508.808574	1015.60259	-0.68521	-0.00034864	-0.65536	-0.00033345	-1.3406	-0.00068209	508.8081192090242	89.422	0.79648	89.892	89.476	90.273	0.47068					37	19	2	0	0	0	0.80179	1	10639	10639		39.253	6.4404	1	1252700			28284	1384	18936	18946	32104	32104					0.09541718368666352
LIKKEGST	8	Unmodified	_LIKKEGST_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;ENST00000422481.5_1_3:14565792-14567385:-|nuORF;ENST00000413414.1_1_3:14565113-14581815:-|nuORF	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.262451171875	2	438.263468	874.512382	0.037237	1.632E-05	-0.30418	-0.00013331	-0.26694	-0.00011699	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.8347	1	2121	2121		23.042	0	1	10667000			28285	4721	18937	18947	32105	32105					0.07010669040232642
LIKKKVGEALH	11	Unmodified	_LIKKKVGEALH_					0	0	0			REV__ENSG00000198796|ENST00000361673|ALPK2	REV__ENSG00000198796|ENST00000361673|ALPK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7670593261719	3	412.599324	1234.77614	1.2696	0.00052384	-2.838	-0.001171	-1.5684	-0.00064714	412.5990859170884	36.831	0.16404	37.112	37.052	37.216	0.28173					5	3	2	0	0	0	0.18028	1	2929	2929		6.3209	0	1	27924	+		28286	23385	18938	18948	32106	32106					0.16814504144940656
LIKKRPGLPVS	11	Unmodified	_LIKKRPGLPVS_					0	0	0			REV__ENSG00000182040|ENST00000614341|USH1G	REV__ENSG00000182040|ENST00000614341|USH1G	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3663940429688	2	604.39789	1206.78123	-0.48751	-0.00029465	-0.63023	-0.00038091	-1.1177	-0.00067556	604.3970699144646	104.98	0.33495	104.96	104.9	105.24	-0.014809					11	7	2	0	0	0	0.17643	1	11343	11343		14.137	0	1	88768	+		28287	22494	18939	18949	32107	32107					0.18610808007565538
LIKKRPGLPVS	11	Unmodified	_LIKKRPGLPVS_					0	0	0			REV__ENSG00000182040|ENST00000614341|USH1G	REV__ENSG00000182040|ENST00000614341|USH1G	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3663940429688	2	604.39789	1206.78123	0.9047	0.0005468	-3.9238	-0.0023715	-3.0191	-0.0018247	604.3949707241793	104.39	0.46946	104.51	104.28	104.75	0.11685					30	11	4	0	0	0	0.17643	1	11086	11086		14.137	0	1	545910	+		28288	22494	18939	18949	32108	32108					0.18610808007565538
LIKLFQII	8	Unmodified	_LIKLFQII_					0	0	0		nc|ENSG829|Q9HDB9|ERVK-5_gag;nc|ENSG856|P87889|ERVK-10_gag;nc|ENSG816|P62685|ERVK-8_gag;nc|ENSG846|Q9YNA8|ERVK-19_gag;nc|ENSG838|P63145|ERVK-24_gag;nc|ENSG827|Q7LDI9|ERVK-6_gag;nc|ENSG820|P63130|ERVK-7_gag;nc|ENSG800|P62684|HERVK_113_gag;nc|ENSG810|P63126|ERVK-9_gag;nc|ENSG809|P63128|ERVK-9_pol;nc|ENSG841|P62683|ERVK-21_gag	nc|ENSG829|Q9HDB9|ERVK-5_gag;nc|ENSG856|P87889|ERVK-10_gag;nc|ENSG810|P63126|ERVK-9_gag;nc|ENSG841|P62683|ERVK-21_gag	nc|ENSG841|P62683|ERVK-21_gag	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3006591796875	2	494.333696	986.652839	-1.6334	-0.00080746	1.3344	0.00065962	-0.29907	-0.00014784	494.3345720315448	97.212	0.84547	97.414	97.096	97.941	0.20207					25	19	2	0	0	0	0.4196	1	9992	9992		13.775	0	1	162900			28289	15364;15360;15363;15362	18940	18950	32109	32109					0.15897872764458043
LIKLHANILVL	11	Unmodified	_LIKLHANILVL_					0	0	0		nc|ENSG00000165694|Q6ZUT3-2|FRMD7;ENSG00000165694|ENST00000298542|FRMD7	nc|ENSG00000165694|Q6ZUT3-2|FRMD7	nc|ENSG00000165694|Q6ZUT3-2|FRMD7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.914794921875	2	623.915916	1245.81728	1.3365	0.00083387	-0.15632	-9.7533E-05	1.1802	0.00073634	623.9155943953253	109.95	0.81959	110.08	109.65	110.46	0.12289					62	32	3	0	0	0	0.78309	1	11816	11816		14.865	3.9993	1	2359700			28290	6114	18941	18951	32110	32110					0.20420265184407072
LIKLHANILVL	11	Unmodified	_LIKLHANILVL_					0	0	0		nc|ENSG00000165694|Q6ZUT3-2|FRMD7;ENSG00000165694|ENST00000298542|FRMD7	nc|ENSG00000165694|Q6ZUT3-2|FRMD7	nc|ENSG00000165694|Q6ZUT3-2|FRMD7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.9169921875	2	623.915916	1245.81728	2.3391	0.0014594	-1.197	-0.0007468	1.1422	0.00071262	623.9150348689084	109.89	1.4015	109.95	109.45	110.85	0.067932					103	58	2	0	0	0	0.80516	1	13314	13314		10.265	1.5716	1	709500			28291	6114	18941	18951	32111	32111					0.20420265184407072
LIKLKSRMM	9	Unmodified	_LIKLKSRMM_					0	0	0		ENST00000561223.1_1_15:39543043-39544343:+|nuORF	ENST00000561223.1_1_15:39543043-39544343:+|nuORF	ENST00000561223.1_1_15:39543043-39544343:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3402709960938	2	560.340672	1118.66679	3.1376	0.0017581	-4.1225	-0.00231	-0.98483	-0.00055184	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.77546	1	11532	11532		31.955	1.4512	1	83033000			28292	13829	18942	18952	32112	32112					0.11220458929597044
LIKLKSRMM	9	Unmodified	_LIKLKSRMM_					0	0	0		ENST00000561223.1_1_15:39543043-39544343:+|nuORF	ENST00000561223.1_1_15:39543043-39544343:+|nuORF	ENST00000561223.1_1_15:39543043-39544343:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3426513671875	2	560.340672	1118.66679	3.1454	0.0017625	-3.7419	-0.0020967	-0.59651	-0.00033425	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.7932	1	13074	13074		19.36	1.995	1	151040			28293	13829	18942	18952	32113	32113					0.11220458929597044
LIKLKSRMM	9	Unmodified	_LIKLKSRMM_					0	0	0		ENST00000561223.1_1_15:39543043-39544343:+|nuORF	ENST00000561223.1_1_15:39543043-39544343:+|nuORF	ENST00000561223.1_1_15:39543043-39544343:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3397216796875	2	560.340672	1118.66679	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.22	1	104.44	103.94	104.94	0.2268								0	0	0	0.2969	1	12726	12726		31.955	2.8053	1				28294	13829	18942	18952	32114	32114					0.11220458929597044
LIKLKSRMM	9	Unmodified	_LIKLKSRMM_					0	0	0		ENST00000561223.1_1_15:39543043-39544343:+|nuORF	ENST00000561223.1_1_15:39543043-39544343:+|nuORF	ENST00000561223.1_1_15:39543043-39544343:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.338623046875	2	560.340672	1118.66679	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.5	1	104.73	104.23	105.23	0.2268								0	0	0	0.2969	1	12765	12765		31.955	1.4512	1				28295	13829	18942	18952	32115	32115					0.11220458929597044
LIKLLGFSESE	11	Unmodified	_LIKLLGFSESE_					0	0	0		nc|ENSG00000185792|Q7RTR0-2|NLRP9;ENSG00000185792|ENST00000332836|NLRP9	nc|ENSG00000185792|Q7RTR0-2|NLRP9	nc|ENSG00000185792|Q7RTR0-2|NLRP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	618.3460083007812	2	618.347729	1234.6809	1.2492	0.00077242	-4.2978	-0.0026576	-3.0487	-0.0018851	618.344978551102	97.744	3.3917	97.971	96.779	100.17	0.22787					230	79	4	0	0	0	0.61369	1	10103	10103		42.864	5.0528	1	960930			28296	7742	18943	18953	32116	32116					0.07295106163223863
LIKLLGHRFK	10	Unmodified	_LIKLLGHRFK_					0	0	0			REV__ENSG00000180871|ENST00000318507|CXCR2	REV__ENSG00000180871|ENST00000318507|CXCR2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.26177978515625	3	408.936159	1223.78665	-2.1639	-0.0008849	-2.9232	-0.0011954	-5.0871	-0.0020803	408.9349432622171	16.275	0.36548	16.275	16.165	16.53	0					22	17	2	0	0	0	0.37624	1	121	121		11.097	0	1	71454	+		28297	22420	18944	18954	32117	32117					0.1837053159001698
LIKMPPSSSP	10	Unmodified	_LIKMPPSSSP_					0	0	0			REV__ENST00000521506.1_1_5:171682090-171682429:-|nuORF	REV__ENST00000521506.1_1_5:171682090-171682429:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.7935791015625	2	528.791535	1055.56852	0.24716	0.0001307	3.3604	0.001777	3.6076	0.0019077	528.7931728625157	35.978	0.73717	36.081	35.817	36.554	0.10306					58	23	4	0	0	0	0.46422	1	1962	1962		58.782	5.693	1	664310	+		28298	28120	18945	18955	32118	32118					0.04295553885413028
LIKNIEMFTT	10	Unmodified	_LIKNIEMFTT_					0	0	0		ENST00000320241.4_1_16:86614428-86614788:+|nuORF	ENST00000320241.4_1_16:86614428-86614788:+|nuORF	ENST00000320241.4_1_16:86614428-86614788:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5467834472656	3	403.889775	1208.6475	2.7708	0.0011191	-2.67	-0.0010784	0.10077	4.0698E-05	404.2244283796689	27.74	0.8874	27.716	27.227	28.115	-0.023556					37	21	2	0	0	0	0.37624	1	1320	1320		19.263	3.342	1	43467			28299	10025	18946	18956	32119	32119					0.05151781119684529
LIKNIEMFTT	10	Unmodified	_LIKNIEMFTT_					0	0	0		ENST00000320241.4_1_16:86614428-86614788:+|nuORF	ENST00000320241.4_1_16:86614428-86614788:+|nuORF	ENST00000320241.4_1_16:86614428-86614788:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	403.889775	1208.6475	-2.0604	-0.00083218	-6.4777	-0.0026163	-8.5381	-0.0034484	403.88747223073193	27.732	0.066866	27.732	27.693	27.76	0	0.047832	-0.0023693	NaN	19.263	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9426.7			28300	10025	18946	18956							0.05151781119684529
LIKNIEMFTT	10	Unmodified	_LIKNIEMFTT_					0	0	0		ENST00000320241.4_1_16:86614428-86614788:+|nuORF	ENST00000320241.4_1_16:86614428-86614788:+|nuORF	ENST00000320241.4_1_16:86614428-86614788:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	403.889775	1208.6475	0.36167	0.00014608	-1.8159	-0.00073341	-1.4542	-0.00058733	404.22445763946115	27.487	0.42948	27.528	27.304	27.733	0.040833	-0.15587	0.0032793	NaN	19.263	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27132			28301	10025	18946	18956							0.05151781119684529
LIKNIEMFTT	10	Unmodified	_LIKNIEMFTT_					0	0	0		ENST00000320241.4_1_16:86614428-86614788:+|nuORF	ENST00000320241.4_1_16:86614428-86614788:+|nuORF	ENST00000320241.4_1_16:86614428-86614788:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	403.889775	1208.6475	0.5366	0.00021673	-4.9825	-0.0020124	-4.4459	-0.0017957	403.8875331673624	27.936	0.56301	27.839	27.576	28.139	-0.096945	0.15548	-0.00055763	NaN	19.263	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81313			28302	10025	18946	18956							0.05151781119684529
LIKNIEMFTT	10	Unmodified	_LIKNIEMFTT_					0	0	0		ENST00000320241.4_1_16:86614428-86614788:+|nuORF	ENST00000320241.4_1_16:86614428-86614788:+|nuORF	ENST00000320241.4_1_16:86614428-86614788:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	403.889775	1208.6475	0.93193	0.0003764	-5.5009	-0.0022218	-4.569	-0.0018454	403.8874457340622	28.007	0.52174	27.752	27.454	27.976	-0.25465	0.068343	-0.0011857	NaN	19.263	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79163			28303	10025	18946	18956							0.05151781119684529
LIKNIPDAKKL	11	Unmodified	_LIKNIPDAKKL_					0	0	0		nc|ENSG00000136108|Q8WWK9-6|CKAP2;chr13:52456179-52456523|49|10.69|0.36|4.91|+|ENST00000490903|CKAP2,CKAP2;ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2	nc|ENSG00000136108|Q8WWK9-6|CKAP2	nc|ENSG00000136108|Q8WWK9-6|CKAP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.9223937988281	3	418.271096	1251.79146	-1.7696	-0.00074016	-2.1437	-0.00089665	-3.9133	-0.0016368	418.2710226776847	105.69	0.23143	105.85	105.73	105.96	0.15924					8	5	2	0	0	0	0.1725	1	11299	11299		18.531	2.0012	1	97984			28304	158	18947	18957	32120	32120					0.17563370942116308
LIKPFQGRF	9	Unmodified	_LIKPFQGRF_					0	0	0			REV__ENST00000412139.6_1_7:86792572-86792851:+|nuORF	REV__ENST00000412139.6_1_7:86792572-86792851:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3318481445312	2	553.329476	1104.6444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.671	1	98.721	98.221	99.221	0.04982								0	0	0	0.30416	1	10441	10441		29.15	7.1897	1		+		28305	26376	18948	18958	32121	32121					0.09626318847836046
LIKPKKKVPI	10	Unmodified	_LIKPKKKVPI_					0	0	0		ENST00000244043.4_1_20:48123609-48123702:-|nuORF	ENST00000244043.4_1_20:48123609-48123702:-|nuORF	ENST00000244043.4_1_20:48123609-48123702:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3535766601562	2	582.415552	1162.81655	3.1789	0.0018515	1.4621	0.00085156	4.641	0.002703	582.4172406378996	103.42	0.20127	103.37	103.25	103.45	-0.043755					8	4	3	0	0	0	0.37624	1	11318	11318		3.1592	3.1592	1	99462			28306	9263	18949	18959	32122	32122					0.2416547053535396
LIKPKRRL	8	Unmodified	_LIKPKRRL_					0	0	0		nc|ENSG00000179348|P23769-2|GATA2;ENSG00000179348|ENST00000341105|GATA2;nc|ENSG00000107485|P23771|GATA3;ENSG00000107485|ENST00000379328|GATA3	nc|ENSG00000179348|P23769-2|GATA2	nc|ENSG00000179348|P23769-2|GATA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.3609619140625	2	512.361111	1022.70767	-0.36988	-0.00018951	0.50559	0.00025904	0.13571	6.9531E-05	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.82464	1	7201	7201		21.702	7.927	1	304520			28307	7265	18950	18960	32123	32123					0.1972230435574147
LIKPRHTL	8	Unmodified	_LIKPRHTL_					0	0	0			REV__nc|ENSG00000105383|P20138-3|CD33	REV__nc|ENSG00000105383|P20138-3|CD33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.3140563964844	2	489.316369	976.618185	-1.0416	-0.00050969	-3.7416	-0.0018308	-4.7832	-0.0023405	489.31444436731414	95.161	1.948	95.208	94.748	96.696	0.046989					116	45	4	0	0	0	0.91005	1	10034	10034		42.474	7.2737	1	1311400	+		28308	17532	18951	18961	32124	32124					0.12894049676367558
LIKPRHTL	8	Unmodified	_LIKPRHTL_					0	0	0			REV__nc|ENSG00000105383|P20138-3|CD33	REV__nc|ENSG00000105383|P20138-3|CD33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.3137512207031	2	489.316369	976.618185	-0.66551	-0.00032564	-4.0957	-0.0020041	-4.7612	-0.0023297	489.3142377106515	95.017	1.7009	95.248	94.736	96.437	0.23103					105	40	4	0	0	0	0.85277	1	9746	9746		25.45	6.0902	1	1344100	+		28309	17532	18951	18961	32125	32125					0.12894049676367558
LIKPVTTT	8	Unmodified	_LIKPVTTT_					0	0	0			REV__ENSG00000161807|ENST00000541538|OR7G1	REV__ENSG00000161807|ENST00000541538|OR7G1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7747497558594	2	436.776211	871.537869	-0.16229	-7.0884E-05	-2.9337	-0.0012814	-3.096	-0.0013523	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.86288	1	9455	9455		26.796	0	1	15341000	+		28310	20780	18952	18962	32126	32126					0.0969614356264401
LIKQATSH	8	Unmodified	_LIKQATSH_					0	0	0		ENSG00000198793|ENST00000361445|MTOR;ENST00000490931.1_1_1:11167544-11171580:-|nuORF	ENSG00000198793|ENST00000361445|MTOR	ENSG00000198793|ENST00000361445|MTOR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.2600402832031	2	449.261259	896.507966	-0.14415	-6.4761E-05	-1.5249	-0.00068508	-1.6691	-0.00074984	449.2602647211942	72.863	0.66953	72.903	72.644	73.313	0.040031					41	22	3	0	0	0	0.86791	1	6952	6952		28.254	1.4582	1	185370			28311	8334	18953	18963	32127	32127					0.055572046173210765
LIKQIPRILGP	11	Unmodified	_LIKQIPRILGP_					0	0	0		ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000498116.1_1_4:15732587-15732905:-|nuORF	ENST00000472730.1_1_3:61728131-61728755:-|nuORF	ENST00000472730.1_1_3:61728131-61728755:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	624.4155883789062	2	624.41354	1246.81253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.844	1	52.915	52.415	53.415	0.070713								0	0	0	0.56276	1	4284	4284		15.642	0.77694	1				28312	12268	18954	18964	32128	32128					0.19899381041636843
LIKRILHSI	9	Unmodified	_LIKRILHSI_					0	0	0			REV__ENSG00000179817|ENST00000314254|MRGPRX4	REV__ENSG00000179817|ENST00000314254|MRGPRX4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8401489257812	2	546.866226	1091.7179	0.84776	0.00046361	0.6217	0.00033998	1.4695	0.0008036	546.8665748000647	100.73	0.11715	100.87	100.77	100.89	0.14352					4	2	2	0	0	0	0.20789	1	10531	10531		11.511	0	1	143330	+		28313	22356	18955	18965	32129	32129					0.1757086729032835
LIKRMLTW	8	Unmodified	_LIKRMLTW_					0	0	0		ENSG00000160396|ENST00000291823|HIPK4	ENSG00000160396|ENST00000291823|HIPK4	ENSG00000160396|ENST00000291823|HIPK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.8207397460938	2	530.82043	1059.62631	0.86442	0.00045885	0.023028	1.2224E-05	0.88744	0.00047107	530.8204450676391	80.434	1.3535	80.374	79.998	81.352	-0.059692					100	39	4	0	0	0	0.86791	1	8148	8148		28.254	7.7724	1	626610			28314	5584	18956	18966	32130	32130					0.0988786060147504
LIKRPLIL	8	Unmodified	_LIKRPLIL_					0	0	0		ENST00000409339.3_1_7:158486161-158494616:-|nuORF	ENST00000409339.3_1_7:158486161-158494616:-|nuORF	ENST00000409339.3_1_7:158486161-158494616:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23284912109375	2	483.347138	964.679722	0.45251	0.00021872	-1.304	-0.00063028	-0.85148	-0.00041156	483.346645488111	23.272	0.45267	22.698	22.467	22.92	-0.57415					14	10	2	0	0	0	0.4196	1	1001	1001		8.2313	0	1	51607			28315	11306	18957	18967	32131	32131					0.19596981375661926
LIKRRNRFQRE	11	Unmodified	_LIKRRNRFQRE_					0	0	0			REV__nc|ENSG00000161847|Q8IY67-3|RAVER1	REV__nc|ENSG00000161847|Q8IY67-3|RAVER1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.9743347167969	3	505.970814	1514.89061	2.9404	0.0014878	4.0115	0.0020297	6.9519	0.0035175	505.97287794220534	112.87	7.7849	112.84	112.19	119.97	-0.024811					550	277	2	0	0	0	0.79224	1	12497	12497		12.957	1.0251	1	2261500	+		28316	20782	18958	18968	32132	32132					0.15376206679593452
LIKSDQVNGVL	11	Unmodified	_LIKSDQVNGVL_					0	0	0		nc|ENSG00000177469|Q6NZI2-2|CAVIN1;ENSG00000177469|ENST00000357037|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	593.3433227539062	2	593.34552	1184.67649	-0.22642	-0.00013434	-1.2506	-0.00074204	-1.477	-0.00087638	593.3446713104415	103.73	2.3003	103.73	103.29	105.59	0					144	55	4	0	0	0	0.70737	1	10672	10672		30.318	0	1	1751500			28317	7143	18959	18969	32133	32133					0.09153641740317653
LIKSDQVNGVL	11	Unmodified	_LIKSDQVNGVL_					0	0	0		nc|ENSG00000177469|Q6NZI2-2|CAVIN1;ENSG00000177469|ENST00000357037|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	593.343994140625	2	593.34552	1184.67649	-0.61427	-0.00036447	-1.2195	-0.00072357	-1.8337	-0.001088	593.3447041008176	103.62	2.4136	103.61	103.22	105.64	-0.0035706					155	57	4	0	0	0	0.61369	2	11164	11164;11214		42.864	11.23	1	2207400			28318	7143	18959	18969	32134;32135	32134					0.09153641740317653
LIKSDQVNGVL	11	Unmodified	_LIKSDQVNGVL_					0	0	0		nc|ENSG00000177469|Q6NZI2-2|CAVIN1;ENSG00000177469|ENST00000357037|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3435668945312	2	593.34552	1184.67649	-1.311	-0.00077786	-0.43407	-0.00025755	-1.745	-0.0010354	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.6921	1	10922	10922		32.812	3.6424	1	3957400			28319	7143	18959	18969	32136	32136					0.09153641740317653
LIKSDQVNGVL	11	Unmodified	_LIKSDQVNGVL_					0	0	0		nc|ENSG00000177469|Q6NZI2-2|CAVIN1;ENSG00000177469|ENST00000357037|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	593.34552	1184.67649	3.08	0.0018275	-4.0815	-0.0024217	-1.0015	-0.00059424	593.3433067063638	103.08	0.31976	103.38	103.3	103.62	0.29865	-0.12137	-0.0023113	NaN	42.864	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	334260			28320	7143	18959	18969							0.09153641740317653
LIKSTVDPGF	10	Unmodified	_LIKSTVDPGF_					0	0	0			REV__chrX:18733808-18749792|19|17.84|0.87|4.36|+|ENST00000496616|PPEF1,PPEF1	REV__chrX:18733808-18749792|19|17.84|0.87|4.36|+|ENST00000496616|PPEF1,PPEF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267822265625	2	538.802957	1075.59136	3.4265	0.0018462	2.3018	0.0012402	5.7283	0.0030864	538.8041922902892	100.95	0.5674	100.89	100.79	101.36	-0.052116					20	13	2	0	0	0	0.37624	1	11013	11013		21.96	12.254	1	262290	+		28321	15948	18960	18970	32137	32137					0.05658896274530889
LIKTPLPIGEK	11	Unmodified	_LIKTPLPIGEK_					0	0	0			REV__ENST00000524576.5_1_11:66203480-66233392:-|nuORF	REV__ENST00000524576.5_1_11:66203480-66233392:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.8827514648438	2	604.884281	1207.75401	-0.095069	-5.7506E-05	-2.7701	-0.0016756	-2.8652	-0.0017331	604.8824032869608	103.42	1.102	103.46	103.07	104.17	0.041481					68	26	4	0	0	0	0.76699	1	11230	11230		18.262	2.6203	1	878690	+		28322	22002	18961	18971	32138	32138					0.1584427967652573
LIKTSKGS	8	Unmodified	_LIKTSKGS_					0	0	0			REV__ENST00000604202.1_1_6:26374788-26375031:+|nuORF	REV__ENST00000604202.1_1_6:26374788-26375031:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2583923339844	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.8347	2	541	541;578		23.042	3.6825	1	867930	+		28323	29355	18962	18972	32139;32140	32139					0.07886686385813846
LIKTSKGS	8	Unmodified	_LIKTSKGS_					0	0	0			REV__ENST00000604202.1_1_6:26374788-26375031:+|nuORF	REV__ENST00000604202.1_1_6:26374788-26375031:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2578125	2	417.258185	832.501818	0.52563	0.00021932	-0.071237	-2.9724E-05	0.45439	0.0001896	417.2580621570988	22.515	2.686	21.904	21.633	24.319	-0.6107					140	63	3	0	0	0	0.82419	1	997	997		13.775	2.9098	1	2260100	+		28324	29355	18962	18972	32141	32141					0.07886686385813846
LIKVQDGG	8	Unmodified	_LIKVQDGG_					0	0	0			REV__ENST00000472593.1_1_3:183521362-183521560:+|nuORF	REV__ENST00000472593.1_1_3:183521362-183521560:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2467041015625	2	415.242535	828.470518	2.5965	0.0010782	2.9987	0.0012452	5.5952	0.0023234	415.2437470423347	107.1	0.79471	107.2	106.82	107.62	0.10395					75	27	5	0	0	0	0.86288	1	13019	13019		26.796	1.3459	1	2535100	+		28325	27263	18963	18973	32142	32142					0.049421133517171256
LIKWARYTL	9	Unmodified	_LIKWARYTL_					0	0	0		ENSG00000206527|ENST00000383657|HACD2	ENSG00000206527|ENST00000383657|HACD2	ENSG00000206527|ENST00000383657|HACD2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3521728515625	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.95	1	116.92	116.42	117.42	-0.02433								0	0	0	0.34348	1	12954	12954		16.473	2.6978	1				28326	8558	18964	18974	32143	32143					0.1114287453635825
LIKWRTGFV	9	Unmodified	_LIKWRTGFV_					0	0	0			REV__ENSG00000175893|ENST00000380916|ZDHHC21	REV__ENSG00000175893|ENST00000380916|ZDHHC21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.34033203125	2	560.337301	1118.66005	3.1377	0.0017581	1.8932	0.0010608	5.0309	0.002819	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.72402	1	11139	11139		38.806	13.356	1	83033000	+		28327	22088	18965	18975	32144	32144					0.10546605364879724
LILASRSSKT	10	Unmodified	_LILASRSSKT_					0	0	0			REV__ENST00000324460.6_1_9:127999118-127999232:-|nuORF	REV__ENST00000324460.6_1_9:127999118-127999232:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326171875	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.8486	1	12754	12754		18.262	2.6203	1	4041000	+		28328	25049	18966	18976	32145	32145					0.10537389914429696
LILDTELLK	9	Unmodified	_LILDTELLK_					0	0	0			REV__ENST00000338728.9_1_6:117870548-117870578:+|nuORF	REV__ENST00000338728.9_1_6:117870548-117870578:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7899169921875	2	529.328808	1056.64306	-0.87699	-0.00046422	3.168	0.0016769	2.291	0.0012127	529.8323926279103	42.749	0.85486	43.183	42.565	43.419	0.4334					34	20	2	0	0	0	0.20789	1	3835	3835		25.45	2.4077	1	207690	+		28329	25224	18967	18977	32146	32146					0.11700639968398718
LILFKKLL	8	Unmodified	_LILFKKLL_					0	0	0			REV__nc|ENSG00000072518|Q7KZI7-10|MARK2	REV__nc|ENSG00000072518|Q7KZI7-10|MARK2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.3008728027344	2	494.351889	986.689225	-0.82927	-0.00040995	3.4074	0.0016844	2.5781	0.0012745	494.3534676061271	97.531	0.25846	97.531	97.337	97.595	0					7	5	2	0	0	0	0.4196	1	9766	9766		4.3163	0	1	55676	+		28330	16650	18968	18978	32147	32147					0.1953474966118165
LILFPRALPVL	11	Unmodified	_LILFPRALPVL_					0	0	0			REV__ENST00000262215.7_1_8:68255517-68255691:-|nuORF	REV__ENST00000262215.7_1_8:68255517-68255691:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.9223937988281	3	417.944431	1250.81146	2.717	0.0011355	-2.8253	-0.0011808	-0.10839	-4.53E-05	417.94307960688224	106.16	0.49866	106.12	105.86	106.36	-0.03714					14	11	2	0	0	0	0.17537	1	11734	11734		10.104	0	1	73342	+		28331	24413	18969	18979	32148	32148					0.19609166672739775
LILGEELL	8	Unmodified	_LILGEELL_					0	0	0			REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27459716796875	2	450.276044	898.537535	-0.14122	-6.3587E-05	-3.5809	-0.0016124	-3.7221	-0.001676	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.87276	1	9809	9809		29.842	0	1	47650000	+		28332	28579	18970	18980	32149	32149					0.08420723842812095
LILGEELL	8	Unmodified	_LILGEELL_					0	0	0			REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.273193359375	2	450.276044	898.537535	1.3282	0.00059806	-4.3489	-0.0019582	-3.0207	-0.0013602	450.2740167635746	102.2	1.0694	102.24	101.81	102.88	0.043198					42	25	2	0	0	0	0.94132	1	11040	11040		54.765	5.5539	1	171420	+		28333	28579	18970	18980	32150	32150					0.08420723842812095
LILGEELL	8	Unmodified	_LILGEELL_					0	0	0			REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2744445800781	2	450.276044	898.537535	-1.2506	-0.00056311	-2.4536	-0.0011048	-3.7041	-0.0016679	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.87276	1	9472	9472		29.842	0	1	44812000	+		28334	28579	18970	18980	32151	32151					0.08420723842812095
LILGEELL	8	Unmodified	_LILGEELL_					0	0	0			REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2750244140625	2	450.276044	898.537535	0.68452	0.00030823	-4.3919	-0.0019776	-3.7074	-0.0016694	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.88915	1	9578	9578		35.201	6.9464	1	41438000	+		28335	28579	18970	18980	32152	32152					0.08420723842812095
LILGEELL	8	Unmodified	_LILGEELL_					0	0	0			REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.274169921875	2	450.276044	898.537535	-1.7763	-0.00079983	-1.0765	-0.0004847	-2.8528	-0.0012845	450.2754829150514	95.155	2.0569	95.357	94.777	96.834	0.20242					114	48	3	0	0	0	0.86791	1	9683	9683		28.254	0	1	856850	+		28336	28579	18970	18980	32153	32153					0.08420723842812095
LILGEELL	8	Unmodified	_LILGEELL_					0	0	0			REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	REV__ENST00000548882.5_1_12:56231570-56231720:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.27471923828125	2	450.276044	898.537535	-0.39172	-0.00017638	-2.9008	-0.0013062	-3.2926	-0.0014826	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.87276	1	11133	11133		29.842	0	1	19085000	+		28337	28579	18970	18980	32154	32154					0.08420723842812095
LILGGHNKRAE	11	Unmodified	_LILGGHNKRAE_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16;ENST00000380443.5_1_20:2843179-2847217:+|nuORF;ENST00000380393.7_1_20:2844875-2903853:+|nuORF	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3665161132812	2	604.348929	1206.6833	0.90419	0.00054645	-1.7654	-0.0010669	-0.86124	-0.00052049	604.3475928738076	104.14	0.17049	104.26	104.11	104.28	0.11685					5	3	2	0	0	0	0.17574	1	11039	11039		41.427	4.2675	1	126650			28338	8651	18971	18981	32155	32155					0.08822999411563615
LILGKVKV	8	Unmodified	_LILGKVKV_					0	0	0			REV__ENSG00000110455|ENST00000263776|ACCS	REV__ENSG00000110455|ENST00000263776|ACCS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.30010986328125	2	435.312764	868.610974	-0.70141	-0.00030533	3.2627	0.0014203	2.5613	0.001115	435.31300070813154	74.154	0.20741	74.545	74.416	74.623	0.39111					6	4	2	0	0	0	0.4196	1	8333	8333		1.3276	0	1	22149	+		28339	17818	18972	18982	32156	32156					0.17141317075936513
LILGNISVE	9	Unmodified	_LILGNISVE_					0	0	0		ENSG00000080007|ENST00000370336|DDX43	ENSG00000080007|ENST00000370336|DDX43	ENSG00000080007|ENST00000370336|DDX43	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.7638244628906	2	479.2844	956.554247	0.64322	0.00030829	1.4208	0.00068099	2.0641	0.00098927	479.2852017464543	51.554	0.71165	51.989	51.576	52.288	0.43505					23	16	2	0	0	0	0.20789	1	5089	5089		60.972	2.19	1	643170			28340	1432	18973	18983	32157	32157					0.07423224728779587
LILGNPASA	9	Unmodified	_LILGNPASA_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2616271972656	2	428.25036	854.486168	-1.6664	-0.00071364	-0.45375	-0.00019432	-2.1202	-0.00090796	428.24987090402954	90.747	0.47055	90.964	90.826	91.297	0.21736					14	11	2	0	0	0	0.20789	1	9160	9160		30.504	7.4612	1	349840			28341	1068	18974	18984	32158	32158					0.053103998687561216
LILGPFGRPPP	11	Unmodified	_LILGPFGRPPP_					0	0	0			REV__ENSG00000184350|ENST00000389832|MRGPRE	REV__ENSG00000184350|ENST00000389832|MRGPRE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.35302734375	2	582.350409	1162.68626	2.7406	0.001596	3.0386	0.0017695	5.7792	0.0033655	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.6921	1	12674	12674		32.812	9.2897	1	7862700	+		28342	22667	18975	18985	32159	32159					0.11142874536380987
LILGPRFQ	8	Unmodified	_LILGPRFQ_					0	0	0		ENST00000296255.7_1_3:128356748-128363813:-|nuORF	ENST00000296255.7_1_3:128356748-128363813:-|nuORF	ENST00000296255.7_1_3:128356748-128363813:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28839111328125	2	472.28982	942.565087	-0.91025	-0.0004299	-2.7735	-0.0013099	-3.6837	-0.0017398	472.2885293382865	99.077	1.813	99.3	98.699	100.51	0.22263					102	42	3	0	0	0	0.89457	1	10332	10332		37.028	3.5129	1	580890			28343	9731	18976	18986	32160	32160					0.09150671893701201
LILGVCTSIL	10	Unmodified	_LILGVCTSIL_					0	0	0			REV__ENST00000574745.5_1_17:9737208-9745865:+|nuORF	REV__ENST00000574745.5_1_17:9737208-9745865:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3131713867188	2	516.312103	1030.60965	0.87307	0.00045078	3.072	0.0015861	3.9451	0.0020369	516.313661473355	102.18	1.1387	102.22	101.81	102.94	0.043198					71	27	3	0	0	0	0.85939	1	11020	11020		23.042	1.0826	1	705960	+		28344	26979	18977	18987	32161	32161					0.09557314924882121
LILGVREQREP	11	Unmodified	_LILGVREQREP_					0	0	0		ENST00000483824.5_1_1:40420832-40434017:+|nuORF;nc|ENSG00000168389|Q8NA29-3|MFSD2A;ENSG00000168389|ENST00000372811|MFSD2A;nc|ENSG00000168389|Q8NA29|MFSD2A;ENST00000491515.5_1_1:40432335-40433413:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2562255859375	3	437.257738	1308.75138	-1.0127	-0.0004428	0.097666	4.2705E-05	-0.91501	-0.00040009	437.25769841228777	99.435	2.9287	99.435	98.234	101.16	0					165	70	3	0	0	0	0.69687	1	10098	10098		32.034	2.4834	1	385900			28345	12524	18978	18988	32162	32162					0.10935824271541605
LILGVREQREP	11	Unmodified	_LILGVREQREP_					0	0	0		ENST00000483824.5_1_1:40420832-40434017:+|nuORF;nc|ENSG00000168389|Q8NA29-3|MFSD2A;ENSG00000168389|ENST00000372811|MFSD2A;nc|ENSG00000168389|Q8NA29|MFSD2A;ENST00000491515.5_1_1:40432335-40433413:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.25677490234375	3	437.257738	1308.75138	-0.16089	-7.0349E-05	-0.76824	-0.00033592	-0.92913	-0.00040627	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.69071	1	10624	10624		33.039	5.3955	1	727380			28346	12524	18978	18988	32163	32163					0.10935824271541605
LILGVREQREP	11	Unmodified	_LILGVREQREP_					0	0	0		ENST00000483824.5_1_1:40420832-40434017:+|nuORF;nc|ENSG00000168389|Q8NA29-3|MFSD2A;ENSG00000168389|ENST00000372811|MFSD2A;nc|ENSG00000168389|Q8NA29|MFSD2A;ENST00000491515.5_1_1:40432335-40433413:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2567138671875	3	437.257738	1308.75138	2.3979	0.0010485	-3.3832	-0.0014793	-0.98538	-0.00043086	437.25617297786823	99.22	2.8692	99.166	98.246	101.11	-0.053734					176	66	3	0	0	0	0.67568	1	10828	10828		35.496	7.8517	1	988170			28347	12524	18978	18988	32164	32164					0.10935824271541605
LILGVREQREP	11	Unmodified	_LILGVREQREP_					0	0	0		ENST00000483824.5_1_1:40420832-40434017:+|nuORF;nc|ENSG00000168389|Q8NA29-3|MFSD2A;ENSG00000168389|ENST00000372811|MFSD2A;nc|ENSG00000168389|Q8NA29|MFSD2A;ENST00000491515.5_1_1:40432335-40433413:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.25738525390625	3	437.257738	1308.75138	2.1229	0.00092824	-3.14	-0.001373	-1.0171	-0.00044476	437.2563089738452	99.067	2.7047	99.115	98.232	100.94	0.048157					189	62	4	0	0	0	0.69071	1	10577	10577		33.039	1.9713	1	798600			28348	12524	18978	18988	32165	32165					0.10935824271541605
LILGVREQREP	11	Unmodified	_LILGVREQREP_					0	0	0		ENST00000483824.5_1_1:40420832-40434017:+|nuORF;nc|ENSG00000168389|Q8NA29-3|MFSD2A;ENSG00000168389|ENST00000372811|MFSD2A;nc|ENSG00000168389|Q8NA29|MFSD2A;ENST00000491515.5_1_1:40432335-40433413:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.25677490234375	3	437.257738	1308.75138	-1.4866	-0.00065002	0.58687	0.00025661	-0.89971	-0.00039341	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.69071	2	10238	10238;10247		33.039	7.3607	1	981430			28349	12524	18978	18988	32166;32167	32166					0.10935824271541605
LILGVREQREP	11	Unmodified	_LILGVREQREP_					0	0	0		ENST00000483824.5_1_1:40420832-40434017:+|nuORF;nc|ENSG00000168389|Q8NA29-3|MFSD2A;ENSG00000168389|ENST00000372811|MFSD2A;nc|ENSG00000168389|Q8NA29|MFSD2A;ENST00000491515.5_1_1:40432335-40433413:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2569274902344	3	437.257738	1308.75138	0.72446	0.00031677	-1.611	-0.00070442	-0.88654	-0.00038765	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.69687	2	10333	10333;10406		32.034	4.3902	1	670840			28350	12524	18978	18988	32168;32169	32168					0.10935824271541605
LILGVREQREP	11	Unmodified	_LILGVREQREP_					0	0	0		ENST00000483824.5_1_1:40420832-40434017:+|nuORF;nc|ENSG00000168389|Q8NA29-3|MFSD2A;ENSG00000168389|ENST00000372811|MFSD2A;nc|ENSG00000168389|Q8NA29|MFSD2A;ENST00000491515.5_1_1:40432335-40433413:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2567443847656	3	437.257738	1308.75138	-1.8163	-0.00079418	0.93317	0.00040803	-0.8831	-0.00038614	437.2580894693445	99.183	2.5872	99.369	98.322	100.91	0.18581					159	59	3	0	0	0	0.72892	1	10317	10317		26.75	3.3718	1	447430			28351	12524	18978	18988	32170	32170					0.10935824271541605
LILGVREQREP	11	Unmodified	_LILGVREQREP_					0	0	0		ENST00000483824.5_1_1:40420832-40434017:+|nuORF;nc|ENSG00000168389|Q8NA29-3|MFSD2A;ENSG00000168389|ENST00000372811|MFSD2A;nc|ENSG00000168389|Q8NA29|MFSD2A;ENST00000491515.5_1_1:40432335-40433413:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2571716308594	3	437.257738	1308.75138	1.9496	0.00085247	-2.6885	-0.0011755	-0.73887	-0.00032308	437.25651996050084	98.928	2.561	99.291	98.354	100.91	0.36292					151	63	3	0	0	0	0.60888	1	12070	12070		43.419	11.384	1	662950			28352	12524	18978	18988	32171	32171					0.10935824271541605
LILGWIFV	8	Unmodified	_LILGWIFV_					0	0	0		ENSG00000100191|ENST00000266086|SLC5A4	ENSG00000100191|ENST00000266086|SLC5A4	ENSG00000100191|ENST00000266086|SLC5A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8014831542969	2	480.799489	959.584425	-0.92579	-0.00044512	3.9174	0.0018835	2.9916	0.0014384	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.88393	1	9690	9690		33.493	0	1	7439400			28353	1806	18979	18989	32172	32172					0.1030162818460667
LILGWIFV	8	Unmodified	_LILGWIFV_					0	0	0		ENSG00000100191|ENST00000266086|SLC5A4	ENSG00000100191|ENST00000266086|SLC5A4	ENSG00000100191|ENST00000266086|SLC5A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.8008117675781	2	480.799489	959.584425	-0.095215	-4.5779E-05	2.8075	0.0013498	2.7123	0.0013041	480.80074135922035	95.38	4.3631	95.446	94.67	99.033	0.065918					323	101	5	0	0	0	0.88393	2	10024	10024;10158		33.493	1.5381	1	17278000			28354	1806	18979	18989	32173;32174	32173					0.1030162818460667
LILGWIFV	8	Unmodified	_LILGWIFV_					0	0	0		ENSG00000100191|ENST00000266086|SLC5A4	ENSG00000100191|ENST00000266086|SLC5A4	ENSG00000100191|ENST00000266086|SLC5A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.80096435546875	2	480.799489	959.584425	-0.79098	-0.0003803	3.4606	0.0016638	2.6696	0.0012835	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.88393	2	9804	9804;9888		33.493	4.3434	1	18644000			28355	1806	18979	18989	32175;32176	32175					0.1030162818460667
LILGWIFV	8	Unmodified	_LILGWIFV_					0	0	0		ENSG00000100191|ENST00000266086|SLC5A4	ENSG00000100191|ENST00000266086|SLC5A4	ENSG00000100191|ENST00000266086|SLC5A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.801025390625	2	480.799489	959.584425	0.73477	0.00035328	2.0253	0.00097374	2.76	0.001327	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.88393	1	9855	9855		33.493	8.989	1	18148000			28356	1806	18979	18989	32177	32177					0.1030162818460667
LILGWIFV	8	Unmodified	_LILGWIFV_					0	0	0		ENSG00000100191|ENST00000266086|SLC5A4	ENSG00000100191|ENST00000266086|SLC5A4	ENSG00000100191|ENST00000266086|SLC5A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.80072021484375	2	480.799489	959.584425	-0.2736	-0.00013155	3.583	0.0017227	3.3094	0.0015911	480.80110367170755	95.033	3.9341	95.453	94.933	98.867	0.41964					263	95	5	0	0	0	0.88393	1	11356	11356		33.493	4.3434	1	9403500			28357	1806	18979	18989	32178	32178					0.1030162818460667
LILHHTEIY	9	Unmodified	_LILHHTEIY_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.7760009765625	2	569.816399	1137.61824	-0.050568	-2.8814E-05	1.2605	0.00071825	1.2099	0.00068944	569.8170110603248	58.052	0.75501	58.086	57.796	58.551	0.033905					31	21	2	0	0	0	0.20789	1	5358	5358		40.573	0	1	56159			28358	7747	18980	18990	32179	32179					0.05494004885713366
LILHKDYSA	9	Unmodified	_LILHKDYSA_					0	0	0		nc|ENSG00000122861|P00749-2|PLAU;ENSG00000122861|ENST00000372764|PLAU	nc|ENSG00000122861|P00749-2|PLAU	nc|ENSG00000122861|P00749-2|PLAU	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2933959960938	2	530.295299	1058.57605	-1.2396	-0.00065735	-2.6354	-0.0013976	-3.875	-0.0020549	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.76764	1	10734	10734		34.173	2.6427	1	1818700			28359	3249	18981	18991	32180	32180					0.049100294773325004
LILHLKLMKLL	11	Unmodified	_LILHLKLMKLL_					0	0	0		ENST00000575041.5_1_16:11864830-11868126:-|nuORF	ENST00000575041.5_1_16:11864830-11868126:-|nuORF	ENST00000575041.5_1_16:11864830-11868126:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.63592529296875	3	445.636721	1333.88834	-0.63519	-0.00028306	-1.3754	-0.00061291	-2.0105	-0.00089597	445.6360586466579	37.863	1.1296	38.176	37.864	38.994	0.31312					138	28	6	0	0	0	0.84494	1	3128	3128		6.3209	0.31984	1	20399000			28360	14042	18982	18992	32181	32181					0.2347464189758739
LILIHTKR	8	Unmodified	_LILIHTKR_					0	0	0			REV__ENSG00000175264|ENST00000308064|CHST1	REV__ENSG00000175264|ENST00000308064|CHST1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.33856201171875	2	497.332019	992.649485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.89	1	116.94	116.44	117.44	0.059448								0	0	0	0.31173	1	12385	12385		8.2313	0	1		+		28361	22054	18983	18993	32182	32182					0.15286622710459596
LILIPDLSQ	9	Unmodified	_LILIPDLSQ_					0	0	0		chr3:126914750-126947773|17|16.65|0.68|4.61|+|1|CHCHD6,None|1	chr3:126914750-126947773|17|16.65|0.68|4.61|+|1|CHCHD6,None|1	chr3:126914750-126947773|17|16.65|0.68|4.61|+|1|CHCHD6,None|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3067932128906	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.592	1	46.563	46.063	47.063	-0.028782								0	0	0	0.30778	1	3838	3838		27.882	3.6795	1				28362	388	18984	18994	32183	32183					0.09632084279917308
LILIRVHLL	9	Unmodified	_LILIRVHLL_					0	0	0		ENST00000477077.1_1_3:93781852-93782666:+|nuORF;ENST00000314622.8_1_3:93781852-93783342:+|nuORF	ENST00000477077.1_1_3:93781852-93782666:+|nuORF	ENST00000477077.1_1_3:93781852-93782666:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3169555664062	2	545.378969	1088.74339	-1.4673	-0.00080021	0.28156	0.00015356	-1.1857	-0.00064666	545.3808262844024	90.733	0.11938	90.913	90.839	90.959	0.18029					4	2	2	0	0	0	0.20789	1	9058	9058		3.9852	0.30089	1	24961			28363	9963	18985	18995	32184	32184					0.20256341812751089
LILISPQNP	9	Unmodified	_LILISPQNP_					0	0	0		ENSG00000110455|ENST00000263776|ACCS	ENSG00000110455|ENST00000263776|ACCS	ENSG00000110455|ENST00000263776|ACCS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.8008117675781	2	497.800217	993.585882	-1.7144	-0.00085342	1.4379	0.00071578	-0.27651	-0.00013765	497.8007994469304	69.145	0.62259	69.178	68.849	69.472	0.033005					71	28	3	0	0	0	0.58151	1	6623	6623		47.916	0	1	392890			28364	2531	18986	18996	32185	32185					0.0888321748270755
LILKKTNVRPN	11	Unmodified	_LILKKTNVRPN_					0	0	0		ENST00000263918.8_1_2:37071777-37071930:-|nuORF	ENST00000263918.8_1_2:37071777-37071930:-|nuORF	ENST00000263918.8_1_2:37071777-37071930:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.5976867675781	3	432.610111	1294.8085	-0.16965	-7.3392E-05	0.83086	0.00035944	0.66121	0.00028604	432.6097400895414	106.49	0.86877	106.46	106.22	107.09	-0.025146					29	19	3	0	0	0	0.17302	1	11554	11554		21.032	6.2534	1	100120			28365	9468	18987	18997	32186	32186					0.17289291547922403
LILKMFIFLRR	11	Unmodified	_LILKMFIFLRR_					0	0	0		ENST00000602526.1_1_9:108337365-108363292:+|nuORF	ENST00000602526.1_1_9:108337365-108363292:+|nuORF	ENST00000602526.1_1_9:108337365-108363292:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.974609375	3	483.975737	1448.90538	0.71828	0.00034763	-2.8893	-0.0013983	-2.171	-0.0010507	483.9743432550441	16.535	0.41935	16.511	16.337	16.757	-0.024035					37	17	3	0	0	0	0.76579	1	157	157		18.531	3.8374	1	771450			28366	14408	18988	18998	32187	32187					0.19888562503365392
LILKRVLSKEM	11	Unmodified	_LILKRVLSKEM_					0	0	0			REV__ENST00000424459.7_2_5:56559262-56559394:+|nuORF	REV__ENST00000424459.7_2_5:56559262-56559394:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	443.94805908203125	3	443.947736	1328.82138	0.74556	0.00033099	1.0888	0.00048339	1.8344	0.00081438	443.9481188888374	107.16	1.4993	107.25	106.38	107.88	0.091263					116	35	4	0	0	0	0.77511	1	11509	11509		16.53	0.6092	1	2920200	+		28367	26519	18989	18999	32188	32188					0.17011986615784735
LILLAQPG	8	Unmodified	_LILLAQPG_					0	0	0		ENST00000497343.5_1_3:160473400-160474084:+|nuORF	ENST00000497343.5_1_3:160473400-160474084:+|nuORF	ENST00000497343.5_1_3:160473400-160474084:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7668151855469	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.737	1	48.731	48.231	49.231	-0.0056419								0	0	0	0.30004	1	4040	4040		21.702	0	1				28368	12800	18990	19000	32189	32189					0.09792178253815109
LILLAQPG	8	Unmodified	_LILLAQPG_					0	0	0		ENST00000497343.5_1_3:160473400-160474084:+|nuORF	ENST00000497343.5_1_3:160473400-160474084:+|nuORF	ENST00000497343.5_1_3:160473400-160474084:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.76690673828125	2	412.765646	823.516739	-1.8859	-0.00077844	3.9578	0.0016337	2.0719	0.00085522	412.7678129581843	48.855	3.3742	48.881	47.541	50.915	0.025574					176	94	2	0	0	0	0.86791	1	3740	3740		28.254	0	1	621000			28369	12800	18990	19000	32190	32190					0.09792178253815109
LILLAQPG	8	Unmodified	_LILLAQPG_					0	0	0		ENST00000497343.5_1_3:160473400-160474084:+|nuORF	ENST00000497343.5_1_3:160473400-160474084:+|nuORF	ENST00000497343.5_1_3:160473400-160474084:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7666320800781	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.89457	1	2721	2721		37.028	0	1	669780			28370	12800	18990	19000	32191	32191					0.09792178253815109
LILLAQPG	8	Unmodified	_LILLAQPG_					0	0	0		ENST00000497343.5_1_3:160473400-160474084:+|nuORF	ENST00000497343.5_1_3:160473400-160474084:+|nuORF	ENST00000497343.5_1_3:160473400-160474084:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76678466796875	2	412.765646	823.516739	-0.52852	-0.00021815	2.9286	0.0012088	2.4001	0.00099068	412.76723094642836	48.755	3.2946	48.662	47.534	50.828	-0.093178					192	86	3	0	0	0	0.82464	2	3704	3704;3724		21.702	0	1	594400			28371	12800	18990	19000	32192;32193	32192					0.09792178253815109
LILLLIPGK	9	Unmodified	_LILLLIPGK_					0	0	0		ENST00000275072.4_1_6:89862778-89862823:+|nuORF	ENST00000275072.4_1_6:89862778-89862823:+|nuORF	ENST00000275072.4_1_6:89862778-89862823:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.34796142578125	2	490.349346	978.684139	-0.25712	-0.00012608	-2.4886	-0.0012203	-2.7457	-0.0013464	490.348019282133	71.074	3.0831	71.621	70.349	73.432	0.54756					147	75	2	0	0	0	0.7932	1	7882	7882		19.36	1.0356	1	346390			28372	9594	18991	19001	32194	32194					0.19394445798559445
LILLPEPFGPR	11	Unmodified	_LILLPEPFGPR_					0	0	0			REV__ENSG00000090924|ENST00000425673|PLEKHG2	REV__ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.9224853515625	3	417.920174	1250.73869	2.7179	0.0011359	2.3496	0.00098195	5.0675	0.0021178	417.9211507262476	105.91	2.7799	105.88	105.06	107.84	-0.03714					241	65	4	0	0	0	0.75921	1	11772	11772		17.833	4.8757	1	23169000	+		28373	16999	18992	19002	32195	32195					0.12335412879338037
LILLRKKQKL	10	Unmodified	_LILLRKKQKL_					0	0	0		ENST00000489408.1_1_3:32023272-32027845:+|nuORF	ENST00000489408.1_1_3:32023272-32027845:+|nuORF	ENST00000489408.1_1_3:32023272-32027845:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2975158691406	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.175	1	76.574	76.074	77.074	0.39969								0	0	0	0.45132	1	8638	8638		4.0829	0.23949	1				28374	12650	18993	19003	32196	32196					0.25959946829675573
LILLSSTK	8	Unmodified	_LILLSSTK_					0	0	0			REV__ENSG00000198752|ENST00000361246|CDC42BPB	REV__ENSG00000198752|ENST00000361246|CDC42BPB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7711486816406	2	437.784036	873.553519	-0.9794	-0.00042877	2.0159	0.00088255	1.0365	0.00045378	437.78495659614373	38.844	0.3359	39.186	39.022	39.358	0.34187					12	7	2	0	0	0	0.4196	1	3205	3205		12.207	0	1	80202	+		28375	23373	18994	19004	32197	32197					0.11168430079715108
LILMQPHVR	9	Unmodified	_LILMQPHVR_					0	0	0		nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.82958984375	2	553.828786	1105.64302	1.454	0.00080528	0.95691	0.00052996	2.4109	0.0013352	553.8291524274036	102.21	0.72701	102.48	102.15	102.88	0.26322					38	17	3	0	0	0	0.7932	1	12407	12407		23.042	2.0956	1	559060			28376	14795	18995	19005	32198	32198					0.09442361487435846
LILNKFHAG	9	Unmodified	_LILNKFHAG_					0	0	0			REV__ENST00000584437.5_1_17:56494125-56494206:-|nuORF	REV__ENST00000584437.5_1_17:56494125-56494206:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.80035400390625	2	506.800552	1011.58655	-1.5362	-0.00077856	2.1529	0.0010911	0.61671	0.00031255	506.8015777288388	44.442	2.8102	44.442	42.605	45.415	0					120	68	3	0	0	0	0.7932	1	3256	3256		25.45	0	1	386210	+		28377	29079	18996	19006	32199	32199					0.08122056922422871
LILRDKVSSVS	11	Unmodified	_LILRDKVSSVS_					0	0	0		MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|91|3|sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|91|3|sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|91|3|sense	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2482604980469	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.21	1	114.18	113.68	114.68	-0.024452								0	0	0	0.56276	1	12649	12649		22.562	4.7284	1				28378	14714	18997	19007	32200	32200					0.1194561714869451
LILSKLATTRT	11	Unmodified	_LILSKLATTRT_					0	0	0		ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.25482177734375	3	406.258967	1215.75507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.837	1	64.962	64.462	65.462	0.12545								0	0	0	0.56276	1	5728	5728		26.75	10.743	1				28379	13719	18998	19008	32201	32201					0.15582494045406747
LILSSRSQVP	10	Unmodified	_LILSSRSQVP_					0	0	0		ENSG00000153012|ENST00000382114|LGI2	ENSG00000153012|ENST00000382114|LGI2	ENSG00000153012|ENST00000382114|LGI2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3273315429688	2	550.327131	1098.63971	0.24684	0.00013584	-0.14913	-8.2072E-05	0.097706	5.377E-05	550.327086838159	99.973	1.2029	100.19	99.606	100.81	0.21511					73	27	4	0	0	0	0.86348	1	10428	10428		31.53	1.2121	1	361560			28380	5208	18999	19009	32202	32202					0.09433389914443069
LILTKQPVH	9	Unmodified	_LILTKQPVH_					0	0	0		MER57A-int_dup1703|chr19:23112751-23113886:+|1.179770426644866|0.266030358890427|2.15|63.0|57|1|anti-sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.179770426644866|0.266030358890427|2.15|63.0|57|1|anti-sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.179770426644866|0.266030358890427|2.15|63.0|57|1|anti-sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8267822265625	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.76996	1	10103	10103		33.516	6.7195	1	15330000			28381	14717	19000	19010	32203	32203					0.12214899127980061
LILTPTPG	8	Unmodified	_LILTPTPG_					0	0	0			REV__chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	REV__chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24853515625	2	406.249829	810.485105	-1.171	-0.0004757	-1.7314	-0.00070337	-2.9023	-0.0011791	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.82464	1	8580	8580		21.702	0	1	30016000	+		28382	15810	19001	19011	32204	32204					0.07228185499843676
LILTPTPG	8	Unmodified	_LILTPTPG_					0	0	0			REV__chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	REV__chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2485656738281	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.86791	1	8961	8961		28.254	1.4582	1	50007000	+		28383	15810	19001	19011	32205	32205					0.07228185499843676
LILTPTPG	8	Unmodified	_LILTPTPG_					0	0	0			REV__chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	REV__chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.24847412109375	2	406.249829	810.485105	-1.8141	-0.00073698	-1.2967	-0.0005268	-3.1108	-0.0012638	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.86791	1	8813	8813		28.254	0	1	42617000	+		28384	15810	19001	19011	32206	32206					0.07228185499843676
LILTPTPG	8	Unmodified	_LILTPTPG_					0	0	0			REV__chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	REV__chr3:51975204-51980836|46|14.3|0.52|4.78|+|0|ABHD14A-ACY1,ABHD14A|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2484130859375	2	406.249829	810.485105	-1.235	-0.0005017	-1.7781	-0.00072233	-3.013	-0.001224	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.88915	1	10456	10456		35.201	6.9464	1	38125000	+		28385	15810	19001	19011	32207	32207					0.07228185499843676
LILVSLPVP	9	Unmodified	_LILVSLPVP_					0	0	0			REV__ENSG00000121871|ENST00000475390|SLITRK3	REV__ENSG00000121871|ENST00000475390|SLITRK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	475.8192443847656	2	475.817879	949.621205	-0.9683	-0.00046074	3.8963	0.0018539	2.928	0.0013932	475.81927434519775	39.671	0.9763	39.677	39.337	40.313	0.0065041					30	24	2	0	0	0	0.7932	1	2426	2426		11.511	3.2797	1	84078	+		28386	15802	19002	19012	32208	32208					0.1443788001051871
LILVVWLLLTL	11	Unmodified	_LILVVWLLLTL_					0	0	0			REV__ENST00000458659.2_2_13:45149225-45149267:-|nuORF	REV__ENST00000458659.2_2_13:45149225-45149267:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.59765625	3	432.62822	1294.86283	2.4105	0.0010429	0.56971	0.00024647	2.9802	0.0012893	432.62820961853134	106.88	0.13248	106.92	106.81	106.94	0.03688					4	2	2	0	0	0	0.17806	1	11712	11712		6.001	4.5823	1	27837	+		28387	26986	19003	19013	32209	32209					0.22719490646818485
LILVVWLLLTL	11	Unmodified	_LILVVWLLLTL_					0	0	0			REV__ENST00000458659.2_2_13:45149225-45149267:-|nuORF	REV__ENST00000458659.2_2_13:45149225-45149267:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.25506591796875	3	432.62822	1294.86283	-1.8324	-0.00079275	-3.8407	-0.0016616	-5.6731	-0.0024544	432.96045466210734	107.1	0.1969	107.14	106.98	107.18	0.036118					6	4	2	0	0	0	0.17806	1	11403	11403		9.6461	1.9667	1	37654	+		28388	26986	19003	19013	32210	32210					0.22719490646818485
LILYLKGETQ	10	Unmodified	_LILYLKGETQ_					0	0	0			REV__ENSG00000071242|ENST00000265678|RPS6KA2;REV__nc|ENSG00000117676|Q15418-3|RPS6KA1;REV__ENSG00000177189|ENST00000379565|RPS6KA3	REV__ENSG00000071242|ENST00000265678|RPS6KA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3431396484375	2	589.344989	1176.67542	-1.324	-0.0007803	-2.248	-0.0013248	-3.572	-0.0021051	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86589	1	10050	10050		29.15	0	1	17904000	+		28389	16624;18276;22187	19004	19014	32211	32211					0.09415427371436635
LILYNVTV	8	Unmodified	_LILYNVTV_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.7825927734375	2	467.784036	933.553519	0.98314	0.0004599	-3.6308	-0.0016984	-2.6476	-0.0012385	467.78218889882737	18.029	0.28679	18.104	17.937	18.223	0.075441					14	8	2	0	0	0	0.86288	1	246	246		26.796	0	1	74338			28390	2075	19005	19015	32212	32212					0.08408430079714435
LILYTLTVAGN	11	Unmodified	_LILYTLTVAGN_					0	0	0		nc|ENSG00000158731|Q8NGY7|OR10J6P	nc|ENSG00000158731|Q8NGY7|OR10J6P	nc|ENSG00000158731|Q8NGY7|OR10J6P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.342529296875	2	589.344989	1176.67542	0.83312	0.00049099	-4.3931	-0.002589	-3.5599	-0.002098	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.7342	1	9535	9535		25.574	1.0549	1	20363000			28391	15027	19006	19016	32213	32213					0.09415427371436635
LILYTLTVAGN	11	Unmodified	_LILYTLTVAGN_					0	0	0		nc|ENSG00000158731|Q8NGY7|OR10J6P	nc|ENSG00000158731|Q8NGY7|OR10J6P	nc|ENSG00000158731|Q8NGY7|OR10J6P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.343505859375	2	589.344989	1176.67542	0.15553	9.1664E-05	-3.5398	-0.0020862	-3.3842	-0.0019945	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.7342	1	11631	11631		25.574	1.0549	1	10540000			28392	15027	19006	19016	32214	32214					0.09415427371436635
LILYYRIY	8	Unmodified	_LILYYRIY_					0	0	0		ENSG00000168830|ENST00000305344|HTR1E	ENSG00000168830|ENST00000305344|HTR1E	ENSG00000168830|ENST00000305344|HTR1E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8262329101562	2	558.826235	1115.63792	-0.1486	-8.3042E-05	2.5867	0.0014455	2.4381	0.0013625	558.8274959479605	65.531	0.78168	65.558	65.246	66.027	0.027321					103	42	3	0	0	0	0.87276	1	6228	6228		29.842	3.1486	1	6703400			28393	6444	19007	19017	32215	32215					0.08472380896455434
LIMFTLQKFRL	11	Unmodified	_LIMFTLQKFRL_					0	0	0		ENST00000226725.10_1_4:166160001-166184388:+|nuORF	ENST00000226725.10_1_4:166160001-166184388:+|nuORF	ENST00000226725.10_1_4:166160001-166184388:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.61688232421875	3	470.616097	1408.82646	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.709	1	62.703	62.203	63.203	-0.0055504								0	0	0	0.56276	1	5818	5818		28.577	8.2617	1				28394	9197	19008	19018	32216	32216					0.13840290478424322
LIMGVIRGKF	10	Unmodified	_LIMGVIRGKF_					0	0	0		ENST00000559016.1_1_15:49426483-49429634:-|nuORF	ENST00000559016.1_1_15:49426483-49429634:-|nuORF	ENST00000559016.1_1_15:49426483-49429634:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3294677734375	2	567.346812	1132.67907	1.5711	0.00089134	0.56155	0.00031859	2.1326	0.0012099	567.345626143056	90.39	0.30051	90.32	90.09	90.39	-0.069969					9	6	2	0	0	0	0.37624	1	9472	9472		11.511	3.2797	1	40759			28395	13801	19009	19019	32217	32217					0.1180381866429343
LIMPLAVARS	10	Unmodified	_LIMPLAVARS_					0	0	0			REV__ENST00000291900.6_1_9:131517914-131533958:-|nuORF	REV__ENST00000291900.6_1_9:131517914-131533958:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.8223266601562	2	535.823169	1069.63179	0.011811	6.3284E-06	-1.6551	-0.00088683	-1.6433	-0.0008805	535.822094739274	50.903	1.5324	50.901	49.95	51.482	-0.0020447					75	42	4	0	0	0	0.84112	1	4311	4311		37.159	1.5408	1	199320	+		28396	24671	19010	19020	32218	32218					0.09975539393280997
LIMPLVNTV	9	Unmodified	_LIMPLVNTV_					0	0	0			REV__nc|ENSG00000125037|Q9P0I2-2|EMC3	REV__nc|ENSG00000125037|Q9P0I2-2|EMC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.7978820800781	2	500.298996	998.583439	-0.499	-0.00024965	2.0007	0.001001	1.5017	0.00075132	500.7979207845338	94.274	1.5127	94.502	94.118	95.631	0.22863					94	36	5	0	0	0	0.76996	1	9619	9619		33.516	1.5607	1	781760	+		28397	18624	19011	19021	32219	32219					0.08409045753387545
LINEYIIL	8	Unmodified	_LINEYIIL_					0	0	0			REV__nc|ENSG00000070614|P52848-3|NDST1;REV__ENSG00000164100|ENST00000296499|NDST3	REV__ENSG00000164100|ENST00000296499|NDST3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.796875	2	495.797143	989.579734	1.3672	0.00067785	-1.0952	-0.000543	0.27199	0.00013485	495.79626399989235	105.14	1.0402	105.29	104.99	106.03	0.15583					65	26	4	0	0	0	0.84634	1	12811	12811		60.294	0	1	604160	+		28398	16607;21031	19012	19022	32220	32220					0.08452699251199647
LINFKLRKTQH	11	Unmodified	_LINFKLRKTQH_					0	0	0			REV__nc|ENSG00000153922|O14646-2|CHD1	REV__nc|ENSG00000153922|O14646-2|CHD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.62420654296875	3	466.617377	1396.8303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.358	1	57.328	56.828	57.828	-0.029625								0	0	0	0.56276	1	5289	5289		21.032	3.1991	1		+		28399	20362	19013	19023	32221	32221					0.14776096296486685
LINGIYAYY	9	Unmodified	_LINGIYAYY_					0	0	0			REV__nc|ENSG00000166265|Q96J86-6|CYYR1	REV__nc|ENSG00000166265|Q96J86-6|CYYR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.2821655273438	2	545.2844	1088.55425	0.081754	4.4579E-05	-3.5262	-0.0019228	-3.4444	-0.0018782	545.282309491857	51.118	0.98422	51.153	50.765	51.749	0.034584					71	28	4	0	0	0	0.5393	1	4107	4107		50.025	5.9077	1	870180	+		28400	21273	19014	19024	32222	32222					0.013512247287508217
LINIGMAKA	9	Unmodified	_LINIGMAKA_					0	0	0		MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|33|3|sense	MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|33|3|sense	MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|33|3|sense	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7769775390625	2	465.775688	929.536823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.983	1	80.923	80.423	81.423	-0.059692								0	0	0	0.2969	1	8157	8157		31.955	0	1				28401	14724	19015	19025	32223	32223					0.06923605922111165
LINISKLDRHI	11	Unmodified	_LINISKLDRHI_					0	0	0			REV__ENST00000593906.1_1_19:40698163-40710439:+|nuORF	REV__ENST00000593906.1_1_19:40698163-40710439:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.2652282714844	3	441.269866	1320.78777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.189	1	63.217	62.717	63.717	0.028133								0	0	0	0.56276	1	5909	5909		22.562	6.6409	1		+		28402	18902	19016	19026	32224	32224					0.14020701168283267
LINKALSFV	9	Unmodified	_LINKALSFV_					0	0	0			REV__ENST00000259339.6_1_9:132572399-132572609:+|nuORF	REV__ENST00000259339.6_1_9:132572399-132572609:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8139953613281	2	502.810585	1003.60662	2.3403	0.0011767	3.7237	0.0018723	6.064	0.003049	502.8125095454433	97.334	3.7238	97.279	96.672	100.4	-0.055542					261	86	6	0	0	0	0.72402	1	10417	10417		38.806	1.647	1	22474000	+		28403	24361	19017	19027	32225	32225					0.10495807862366746
LINLAFSCV	9	Unmodified	_LINLAFSCV_					0	0	0			REV__ENST00000261168.8_1_12:14654701-14654992:+|nuORF	REV__ENST00000261168.8_1_12:14654701-14654992:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	490.2684326171875	2	490.267696	978.520839	-1.0359	-0.00050789	2.4837	0.0012177	1.4477	0.00070977	490.26894349416415	84.446	2.9711	84.446	83.546	86.517	0					137	69	2	0	0	0	0.78536	1	8120	8120		29.15	0	1	202680	+		28404	24378	19018	19028	32226	32226					0.030718996852101554
LINTSEKM	8	Unmodified	_LINTSEKM_					0	0	0		ENST00000448869.1_1_1:156616853-156631184:-|nuORF	ENST00000448869.1_1_1:156616853-156631184:-|nuORF	ENST00000448869.1_1_1:156616853-156631184:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.2450256347656	2	468.24696	934.479368	-0.27928	-0.00013077	-3.2936	-0.0015422	-3.5729	-0.001673	468.2452890208871	47.437	2.6016	47.349	46.711	49.313	-0.08765					186	72	4	0	0	0	0.79403	1	3539	3539		63.306	2.3343	1	6668700			28405	11866	19019	19029	32227	32227					0.009507189258897597
LINYCQLQPT	10	Carbamidomethyl (C)	_LINYC(Carbamidomethyl (C))QLQPT_	LINYC(1)QLQPT		LINYC(46)QLQPT		0	1	0			REV__chr6:70699512-70732378|16|17.38|0.56|4.96|+|0|TE_info:L1MA3,L1MA3_dup3493,L1,LINE,donor,-,70697606,70699512|None,SMAP1|10	REV__chr6:70699512-70732378|16|17.38|0.56|4.96|+|0|TE_info:L1MA3,L1MA3_dup3493,L1,LINE,donor,-,70697606,70699512|None,SMAP1|10	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	625.3168334960938	2	625.315906	1248.61726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.244	1	65.369	64.869	65.869	0.12532								0	0	0	0.45132	1	5793	5793		45.972	9.5255	1		+		28406	15888	19020	19030	32228	32228	209				0.002894224544888857
LIPAARDL	8	Unmodified	_LIPAARDL_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.78033447265625	2	434.766178	867.517802	0.36796	0.00015998	-0.039909	-1.7351E-05	0.32805	0.00014263	434.7656454619436	36.25	0.25337	36.531	36.47	36.724	0.28173					7	5	2	0	0	0	0.4196	1	2839	2839		10.866	0	1	56487	+		28407	20239	19021	19031	32229	32229					0.07874392622693449
LIPATIQDKLI	11	Unmodified	_LIPATIQDKLI_					0	0	0		ENST00000559816.1_1_15:50534459-50545113:-|nuORF;nc|ENSG00000140287|P19113-2|HDC;ENSG00000140287|ENST00000267845|HDC	ENST00000559816.1_1_15:50534459-50545113:-|nuORF	ENST00000559816.1_1_15:50534459-50545113:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.9223327636719	3	408.923585	1223.74892	-0.18603	-7.607E-05	-2.9357	-0.0012005	-3.1218	-0.0012766	408.9223182552884	104.73	3.6152	104.72	103.66	107.27	-0.014809					241	85	5	0	0	0	0.76251	1	11297	11297		19.263	0.15916	1	2991100			28408	4422	19022	19032	32230	32230					0.14599975813894162
LIPCAFVSHY	10	Unmodified	_LIPCAFVSHY_					0	0	0			REV__ENST00000507937.1_1_5:177574516-177575030:+|nuORF	REV__ENST00000507937.1_1_5:177574516-177575030:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2943725585938	2	575.291702	1148.56885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.846	1	77.246	76.746	77.746	0.39969								0	0	0	0.45132	1	8730	8730		53.351	8.9743	1		+		28409	19975	19023	19033	32231	32231					0.0005097360526633565
LIPCGGAAHGA	11	Carbamidomethyl (C)	_LIPC(Carbamidomethyl (C))GGAAHGA_	LIPC(1)GGAAHGA		LIPC(50)GGAAHGA		0	1	0		ENST00000526787.2_1_11:134023592-134023808:-|nuORF	ENST00000526787.2_1_11:134023592-134023808:-|nuORF	ENST00000526787.2_1_11:134023592-134023808:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.2532958984375	2	512.255651	1022.49675	0.39693	0.00020333	-3.8855	-0.0019904	-3.4886	-0.001787	512.2534945513374	54.386	1.4462	54.467	54.003	55.449	0.081524					65	38	3	0	0	0	0.52667	1	4473	4473		50.025	15.852	1	633090			28410	13269	19024	19034	32232	32232	179				-0.013599407484662152
LIPCHQGCLA	10	Unmodified	_LIPCHQGCLA_					0	0	0			REV__ENSG00000104237|ENST00000220676|RP1	REV__ENSG00000104237|ENST00000220676|RP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.762451171875	2	527.762255	1053.50996	-1.2352	-0.00065191	0.89362	0.00047162	-0.34161	-0.00018029	527.7622964022323	57.563	0.51844	57.563	57.392	57.91	0					29	19	2	0	0	0	0.84112	1	4965	4965		37.159	1.5408	1	60756	+		28411	17443	19025	19035	32233	32233					-0.01465825960735856
LIPGKLAR	8	Unmodified	_LIPGKLAR_					0	0	0		ENST00000605573.1_1_3:187871604-187871808:-|nuORF	ENST00000605573.1_1_3:187871604-187871808:-|nuORF	ENST00000605573.1_1_3:187871604-187871808:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2512512207031	2	434.292362	866.570172	0.54736	0.00023771	-0.19764	-8.5835E-05	0.34971	0.00015188	434.29210672789816	79.877	1.233	80.018	79.377	80.61	0.14117					102	51	3	0	0	0	0.4196	1	7526	7526		7.6903	0	1	300700			28412	14433	19026	19036	32234	32234					0.13154975756299336
LIPGLISGL	9	Unmodified	_LIPGLISGL_					0	0	0		nc|ENSG00000105778|Q8NBF6-2|AVL9;ENSG00000105778|ENST00000318709|AVL9	nc|ENSG00000105778|Q8NBF6-2|AVL9	nc|ENSG00000105778|Q8NBF6-2|AVL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7874450683594	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.7932	1	2847	2847		20.482	1.1219	1	15753000			28413	2251	19027	19037	32235	32235					0.11308733942325944
LIPHIRYT	8	Unmodified	_LIPHIRYT_					0	0	0		ENSG00000108839|ENST00000251535|ALOX12	ENSG00000108839|ENST00000251535|ALOX12	ENSG00000108839|ENST00000251535|ALOX12	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.80322265625	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.59	1	54.582	54.082	55.082	-0.0077095								0	0	0	0.30004	1	4822	4822		21.702	0	1				28414	2434	19028	19038	32236	32236					0.08122056922411502
LIPHIRYT	8	Unmodified	_LIPHIRYT_					0	0	0		ENSG00000108839|ENST00000251535|ALOX12	ENSG00000108839|ENST00000251535|ALOX12	ENSG00000108839|ENST00000251535|ALOX12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8009033203125	2	506.800552	1011.58655	0.2918	0.00014788	-0.072545	-3.6766E-05	0.21925	0.00011112	506.8005319323782	43.625	1.7295	43.682	42.323	44.053	0.056747					65	45	2	0	0	0	0.86791	1	2948	2948		28.254	0	1	255230			28415	2434	19028	19038	32237	32237					0.08122056922411502
LIPHIRYT	8	Unmodified	_LIPHIRYT_					0	0	0		ENSG00000108839|ENST00000251535|ALOX12	ENSG00000108839|ENST00000251535|ALOX12	ENSG00000108839|ENST00000251535|ALOX12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8017578125	2	506.800552	1011.58655	-0.1225	-6.2083E-05	1.1991	0.00060769	1.0766	0.00054561	506.8011249172422	46.216	2.1586	46.137	45.418	47.576	-0.079006					85	63	2	0	0	0	0.87276	1	3415	3415		29.842	0	1	271040			28416	2434	19028	19038	32238	32238					0.08122056922411502
LIPIMIFP	8	Unmodified	_LIPIMIFP_					0	0	0		ENST00000215770.5_1_22:24313674-24314007:+|nuORF	ENST00000215770.5_1_22:24313674-24314007:+|nuORF	ENST00000215770.5_1_22:24313674-24314007:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2861022949219	2	472.2879	942.561247	-0.9074	-0.00042856	1.6989	0.00080238	0.79151	0.00037382	472.2888733808942	102.09	1.2249	102.29	101.67	102.89	0.19484					49	29	2	0	0	0	0.84567	1	10762	10762		24.504	0.30126	1	348320			28417	9117	19029	19039	32239	32239					0.08766866075632151
LIPIMIFP	8	Unmodified	_LIPIMIFP_					0	0	0		ENST00000215770.5_1_22:24313674-24314007:+|nuORF	ENST00000215770.5_1_22:24313674-24314007:+|nuORF	ENST00000215770.5_1_22:24313674-24314007:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.287841796875	2	472.2879	942.561247	-1.7052	-0.00080534	1.6051	0.00075807	-0.10007	-4.7264E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.88393	1	12108	12108		33.493	5.2387	1	3080300			28418	9117	19029	19039	32240	32240					0.08766866075632151
LIPIRNVTEAK	11	Unmodified	_LIPIRNVTEAK_					0	0	0		ENSG00000068784|ENST00000263736|SRBD1;nc|ENSG00000068784|Q8N5C6-2|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.38623046875	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.69995	1	13187	13187		31.53	1.2121	1	19815000			28419	1207	19030	19040	32241	32241					0.13405609902633842
LIPKGDLS	8	Unmodified	_LIPKGDLS_					0	0	0		ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.75079345703125	2	421.752736	841.490919	-1.7818	-0.0007515	-1.2969	-0.00054696	-3.0787	-0.0012985	421.7522177518738	76.828	1.8707	76.953	75.249	77.12	0.12485					132	61	3	0	0	0	0.85277	1	7207	7207		25.45	1.2474	1	487030			28420	774	19031	19041	32242	32242					0.06383284011531032
LIPKLNKML	9	Unmodified	_LIPKLNKML_					0	0	0			REV__ENST00000474723.5_1_9:124736354-124752043:-|nuORF	REV__ENST00000474723.5_1_9:124736354-124752043:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.7822875976562	2	535.343738	1068.67292	-0.79029	-0.00042308	0.40309	0.00021579	-0.38721	-0.00020729	535.3444684026205	39.059	0.42357	39.4	39.107	39.531	0.34187					17	9	3	0	0	0	0.20789	1	3235	3235		18.324	0	1	92886	+		28421	22082	19032	19042	32243	32243					0.14133300432763463
LIPKNAGV	8	Unmodified	_LIPKNAGV_					0	0	0		ENSG00000103888|ENST00000394685|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.25714111328125	2	406.255446	810.496338	0.27279	0.00011082	3.6804	0.0014952	3.9532	0.001606	406.25677816056157	49.48	2.6493	49.522	48.485	51.134	0.042236					135	72	3	0	0	0	0.86288	1	3814	3814		26.796	1.3459	1	326490			28422	2104	19033	19043	32244	32244					0.08351007593989834
LIPKNAGV	8	Unmodified	_LIPKNAGV_					0	0	0		ENSG00000103888|ENST00000394685|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2570495605469	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.81548	1	3806	3806		20.482	6.7065	1	334920			28423	2104	19033	19043	32245	32245					0.08351007593989834
LIPKPARTLCV	11	Unmodified	_LIPKPARTLCV_					0	0	0			REV__ENSG00000135144|ENST00000548759|DTX1	REV__ENSG00000135144|ENST00000548759|DTX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.8724365234375	2	605.870651	1209.72675	-0.46872	-0.00028398	2.8399	0.0017206	2.3711	0.0014366	605.8722201329331	100.48	2.0532	100.52	100	102.06	0.039742					113	47	4	0	0	0	0.70737	1	10678	10678		30.318	2.2362	1	1745000	+		28424	19196	19034	19044	32246	32246					0.13027472864496303
LIPKPARTLCV	11	Unmodified	_LIPKPARTLCV_					0	0	0			REV__ENSG00000135144|ENST00000548759|DTX1	REV__ENSG00000135144|ENST00000548759|DTX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.8720092773438	2	605.870651	1209.72675	-0.046166	-2.7971E-05	2.3267	0.0014097	2.2805	0.0013817	605.8718844200029	100.18	2.006	100.22	99.762	101.77	0.046349					129	46	5	0	0	0	0.75495	1	10807	10807		20.947	0	1	1666000	+		28425	19196	19034	19044	32247	32247					0.13027472864496303
LIPKPARTLCV	11	Unmodified	_LIPKPARTLCV_					0	0	0			REV__ENSG00000135144|ENST00000548759|DTX1	REV__ENSG00000135144|ENST00000548759|DTX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.8729248046875	2	605.870651	1209.72675	2.1215	0.0012854	0.78379	0.00047488	2.9053	0.0017602	605.870912508801	99.925	1.6378	100.29	99.878	101.52	0.36292					110	40	4	0	0	0	0.72106	1	12184	12184		28.081	1.3886	1	1159400	+		28426	19196	19034	19044	32248	32248					0.13027472864496303
LIPLILILTS	10	Unmodified	_LIPLILILTS_					0	0	0		ENSG00000204701|ENST00000641151|OR2J3;nc|ENSG00000204701|O76001|OR2J3;ENSG00000204702|ENST00000641659|OR2J1	ENSG00000204701|ENST00000641151|OR2J3	ENSG00000204701|ENST00000641151|OR2J3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.3755493164062	2	548.373018	1094.73148	0.10149	5.5656E-05	2.2515	0.0012346	2.353	0.0012903	548.3739291266121	36.797	0.76149	36.82	36.228	36.989	0.023624					53	21	3	0	0	0	0.91289	2	2058	2047;2058		7.1934	3.0512	1	226620			28427	8481	19035	19045	32249;32250	32250					0.18790680278880245
LIPLLDSQL	9	Unmodified	_LIPLLDSQL_					0	0	0			REV__nc|ENSG00000111602|Q9UNS1-2|TIMELESS	REV__nc|ENSG00000111602|Q9UNS1-2|TIMELESS	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3075256347656	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.461	1	63.583	63.083	64.083	0.12252								0	0	0	0.30778	1	5562	5562		27.882	3.6795	1		+		28428	17876	19036	19046	32251	32251					0.0963208427989457
LIPLLEGKAR	10	Unmodified	_LIPLLEGKAR_					0	0	0		nc|ENSG00000111271|Q6JQN1-3|ACAD10;ENST00000508303.5_1_12:112159488-112186840:+|nuORF;nc|ENSG00000111271|Q6JQN1-2|ACAD10;ENST00000413681.7_1_12:112130513-112186840:+|nuORF;ENSG00000111271|ENST00000313698|ACAD10;nc|ENSG00000111271|Q6JQN1-5|ACAD10	nc|ENSG00000111271|Q6JQN1-3|ACAD10	nc|ENSG00000111271|Q6JQN1-3|ACAD10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.3527221679688	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.86589	1	10450	10450		29.15	3.5755	1	5963400			28429	2568	19037	19047	32252	32252					0.14682857190791765
LIPLLHPQT	9	Unmodified	_LIPLLHPQT_					0	0	0			REV__nc|ENSG00000151208|Q8TDM6-2|DLG5	REV__nc|ENSG00000151208|Q8TDM6-2|DLG5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3140258789062	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.3064	-0.0011908	-3.8683	-0.0019972	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.78536	1	10643	10643		29.15	1.0681	1	1268100	+		28430	20240	19038	19048	32253	32253					0.10343210236646883
LIPLPVTG	8	Unmodified	_LIPLPVTG_					0	0	0			REV__ENSG00000148343|ENST00000684074|MIGA2	REV__ENSG00000148343|ENST00000684074|MIGA2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.23773193359375	2	405.260197	808.50584	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.436	1	63.436	62.936	63.936	0								0	0	0	0.30125	1	5562	5562		20.482	4.8456	1		+		28431	20109	19039	19049	32254	32254					0.09392775879530291
LIPLRTSM	8	Unmodified	_LIPLRTSM_					0	0	0		ENSG00000066185|ENST00000372565|ZMYND12	ENSG00000066185|ENST00000372565|ZMYND12	ENSG00000066185|ENST00000372565|ZMYND12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774658203125	2	465.775688	929.536823	-0.25577	-0.00011913	4.2902	0.0019982	4.0344	0.0018791	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.86791	1	7834	7834		28.254	1.4582	1	451640			28432	1152	19040	19050	32255	32255					0.06923605922099796
LIPLSLEPT	9	Unmodified	_LIPLSLEPT_					0	0	0			REV__ENST00000588144.2_1_18:56337845-56339000:-|nuORF	REV__ENST00000588144.2_1_18:56337845-56339000:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958984375	2	491.794601	981.574648	-1.6029	-0.00078829	3.7177	0.0018284	2.1148	0.0010401	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.77546	1	3342	3342		31.955	4.0726	1	603870	+		28433	29135	19041	19051	32256	32256					0.08312395388554705
LIPMPLVV	8	Unmodified	_LIPMPLVV_					0	0	0			REV__ENSG00000144040|ENST00000272433|SFXN5	REV__ENSG00000144040|ENST00000272433|SFXN5	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.28204345703125	2	441.280075	880.545597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.685	1	40.654	40.154	41.154	-0.030991								0	0	0	0.30553	1	2916	2916		16.705	6.5202	1		+		28434	19868	19042	19052	32257	32257					0.10054579558584464
LIPNVETIL	9	Unmodified	_LIPNVETIL_					0	0	0		nc|ENSG00000157637|Q9HBR0-3|SLC38A10;nc|ENSG00000157637|Q9HBR0-2|SLC38A10;ENSG00000157637|ENST00000374759|SLC38A10	nc|ENSG00000157637|Q9HBR0-3|SLC38A10	nc|ENSG00000157637|Q9HBR0-3|SLC38A10	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.2914733886719	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.705	1	53.786	53.286	54.286	0.081524								0	0	0	0.30053	1	4402	4402		30.504	2.4222	1				28435	5443	19043	19053	32258	32258					0.09632084279917308
LIPPPFLF	8	Unmodified	_LIPPPFLF_					0	0	0			REV__ENST00000381181.1_1_21:35321252-35321396:+|nuORF	REV__ENST00000381181.1_1_21:35321252-35321396:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2886047363281	2	472.286214	942.557876	-0.108	-5.1006E-05	3.1769	0.0015004	3.0689	0.0014494	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.88393	1	10429	10429		33.493	2.9893	1	46909000	+		28436	25961	19044	19054	32259	32259					0.08429939293273492
LIPPQGLL	8	Unmodified	_LIPPQGLL_					0	0	0			REV__ENSG00000162757|ENST00000294811|C1orf74	REV__ENSG00000162757|ENST00000294811|C1orf74	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.7747802734375	2	425.773471	849.53239	0.072338	3.08E-05	3.4421	0.0014656	3.5144	0.0014964	425.7748719136107	39.248	3.011	39.218	37.076	40.087	-0.03027					219	70	5	0	0	0	0.80963	1	2683	2683		15.636	0	1	15142000	+		28437	20846	19045	19055	32260	32260					0.10160464770854105
LIPPQGLL	8	Unmodified	_LIPPQGLL_					0	0	0			REV__ENSG00000162757|ENST00000294811|C1orf74	REV__ENSG00000162757|ENST00000294811|C1orf74	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747802734375	2	425.773471	849.53239	0.348	0.00014817	2.8727	0.0012231	3.2207	0.0013713	425.77466249920843	37.645	1.0176	37.958	37.411	38.429	0.31312					95	25	5	0	0	0	0.83466	1	3049	3049		23.037	0	1	45114000	+		28438	20846	19045	19055	32261	32261					0.10160464770854105
LIPRHWIP	8	Unmodified	_LIPRHWIP_					0	0	0		ENSG00000151790|ENST00000536354|TDO2	ENSG00000151790|ENST00000536354|TDO2	ENSG00000151790|ENST00000536354|TDO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3130493164062	2	516.311087	1030.60762	3.0984	0.0015997	2.7893	0.0014401	5.8876	0.0030398	516.3124899317548	102.33	1.1091	102.29	101.92	103.03	-0.047005					68	26	3	0	0	0	0.90024	1	11154	11154		39.021	8.5179	1	756390			28439	5143	19046	19056	32262	32262					0.09354067021922674
LIPRHWIP	8	Unmodified	_LIPRHWIP_					0	0	0		ENSG00000151790|ENST00000536354|TDO2	ENSG00000151790|ENST00000536354|TDO2	ENSG00000151790|ENST00000536354|TDO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3134765625	2	516.311087	1030.60762	1.9037	0.0009829	3.7546	0.0019385	5.6583	0.0029214	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.82464	1	12240	12240		21.702	1.7056	1	22616000			28440	5143	19046	19056	32263	32263					0.09354067021922674
LIPRHWIP	8	Unmodified	_LIPRHWIP_					0	0	0		ENSG00000151790|ENST00000536354|TDO2	ENSG00000151790|ENST00000536354|TDO2	ENSG00000151790|ENST00000536354|TDO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3143310546875	2	516.311087	1030.60762	1.791	0.00092474	3.8605	0.0019932	5.6516	0.002918	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.89457	1	12012	12012		37.028	7.8789	1	24820000			28441	5143	19046	19056	32264	32264					0.09354067021922674
LIPRIVKLPL	10	Unmodified	_LIPRIVKLPL_					0	0	0			REV__nc|ENSG00000110422|Q9H422-2|HIPK3	REV__nc|ENSG00000110422|Q9H422-2|HIPK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.4039916992188	2	581.407727	1160.8009	0.27248	0.00015842	-3.6485	-0.0021212	-3.376	-0.0019628	581.40539803952	108.96	0.64938	108.99	108.59	109.24	0.034355					68	31	3	0	0	0	0.88541	1	11961	11961		11.511	0.64546	1	3975600	+		28442	17811	19047	19057	32265	32265					0.2269318401831697
LIPRIVKLPL	10	Unmodified	_LIPRIVKLPL_					0	0	0			REV__nc|ENSG00000110422|Q9H422-2|HIPK3	REV__nc|ENSG00000110422|Q9H422-2|HIPK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	581.4061279296875	2	581.407727	1160.8009	-1.3499	-0.00078484	-2.0358	-0.0011836	-3.3857	-0.0019685	581.4064330770331	108.95	0.5045	108.97	108.69	109.19	0.020561					51	25	3	0	0	0	0.88106	1	11628	11628		12.207	1.3413	1	1616400	+		28443	17811	19047	19057	32266	32266					0.2269318401831697
LIPRLVPPCP	10	Unmodified	_LIPRLVPPCP_					0	0	0			REV__ENST00000563209.1_1_16:58545213-58545477:+|nuORF	REV__ENST00000563209.1_1_16:58545213-58545477:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8301391601562	2	552.833537	1103.65252	-0.61722	-0.00034122	1.7794	0.0009837	1.1622	0.00064248	552.8344752553141	90.815	1.0329	90.815	90.392	91.425	0					38	24	2	0	0	0	0.37624	1	8802	8802		37.159	11.585	1	71178	+		28444	28814	19048	19058	32267	32267					0.10484129772953565
LIPRLVPPCP	10	Unmodified	_LIPRLVPPCP_					0	0	0			REV__ENST00000563209.1_1_16:58545213-58545477:+|nuORF	REV__ENST00000563209.1_1_16:58545213-58545477:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.830322265625	2	552.833537	1103.65252	0.75872	0.00041945	-0.10544	-5.8292E-05	0.65328	0.00036116	552.8334443866834	90.297	1.41	90.451	89.701	91.111	0.15388					42	33	2	0	0	0	0.37624	1	9123	9123		38.806	4.6336	1	87929	+		28445	28814	19048	19058	32268	32268					0.10484129772953565
LIPRLVPPCP	10	Unmodified	_LIPRLVPPCP_					0	0	0			REV__ENST00000563209.1_1_16:58545213-58545477:+|nuORF	REV__ENST00000563209.1_1_16:58545213-58545477:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8300170898438	2	552.833537	1103.65252	-1.443	-0.00079773	1.8937	0.0010469	0.45077	0.0002492	552.8343836397007	90.017	1.5022	90.193	89.65	91.152	0.1758					45	35	2	0	0	0	0.37624	1	9064	9064		29.15	8.2026	1	140690	+		28446	28814	19048	19058	32269	32269					0.10484129772953565
LIPRVLHTCV	10	Unmodified	_LIPRVLHTCV_					0	0	0			REV__ENST00000539658.1_1_12:121148334-121149523:+|nuORF	REV__ENST00000539658.1_1_12:121148334-121149523:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8428955078125	2	575.841894	1149.66923	-0.99735	-0.00057431	2.7404	0.001578	1.743	0.0010037	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.84112	1	9730	9730		37.159	2.0071	1	5638300	+		28447	28453	19049	19059	32270	32270					0.10038630658914371
LIPRVLHTCV	10	Unmodified	_LIPRVLHTCV_					0	0	0			REV__ENST00000539658.1_1_12:121148334-121149523:+|nuORF	REV__ENST00000539658.1_1_12:121148334-121149523:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.843017578125	2	575.841894	1149.66923	1.9391	0.0011166	-0.2647	-0.00015242	1.6745	0.00096422	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.86589	1	9784	9784		29.15	0	1	5986700	+		28448	28453	19049	19059	32271	32271					0.10038630658914371
LIPRVLHTCV	10	Unmodified	_LIPRVLHTCV_					0	0	0			REV__ENST00000539658.1_1_12:121148334-121149523:+|nuORF	REV__ENST00000539658.1_1_12:121148334-121149523:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8429565429688	2	575.841894	1149.66923	-1.368	-0.00078773	3.1087	0.0017901	1.7407	0.0010024	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.84112	2	9322	9322;9383		37.159	10.466	1	6121300	+		28449	28453	19049	19059	32272;32273	32272					0.10038630658914371
LIPRVRLEGF	10	Unmodified	_LIPRVRLEGF_					0	0	0			REV__ENST00000568641.1_1_17:5403125-5403643:-|nuORF	REV__ENST00000568641.1_1_17:5403125-5403643:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.58074951171875	3	400.580152	1198.71863	3.1805	0.001274	-2.603	-0.0010427	0.57754	0.00023135	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.85633	1	12354	12354		21.686	2.4231	1	4827300	+		28450	28902	19050	19060	32274	32274					0.1272166193934936
LIPRVRLEGF	10	Unmodified	_LIPRVRLEGF_					0	0	0			REV__ENST00000568641.1_1_17:5403125-5403643:-|nuORF	REV__ENST00000568641.1_1_17:5403125-5403643:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.57940673828125	3	400.580152	1198.71863	3.1796	0.0012737	-2.0115	-0.00080578	1.168	0.00046789	400.57916816268914	115.86	0.63822	115.89	115.41	116.05	0.026466					29	20	2	0	0	0	0.8573	1	12661	12661		16.007	2.4988	1	56920	+		28451	28902	19050	19060	32275	32275					0.1272166193934936
LIPRVRLEGF	10	Unmodified	_LIPRVRLEGF_					0	0	0			REV__ENST00000568641.1_1_17:5403125-5403643:-|nuORF	REV__ENST00000568641.1_1_17:5403125-5403643:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.5804138183594	3	400.580152	1198.71863	-1.7911	-0.00071747	2.7096	0.0010854	0.91848	0.00036792	400.5810817867452	112.19	0.31043	112.3	112.17	112.48	0.10638					41	11	4	0	0	0	0.85633	1	12095	12095		21.686	0	1	8533200	+		28452	28902	19050	19060	32276	32276					0.1272166193934936
LIPSILEK	8	Unmodified	_LIPSILEK_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7926330566406	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.80706	1	2121	2121		19.36	0	1	3484100			28453	7613	19051	19061	32277	32277					0.10984716596760791
LIPSPPQHL	9	Unmodified	_LIPSPPQHL_					0	0	0			REV__ENST00000262815.12_2_19:19467289-19467406:+|nuORF	REV__ENST00000262815.12_2_19:19467289-19467406:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2904968261719	2	501.292559	1000.57057	-1.4828	-0.00074334	-2.8745	-0.001441	-4.3573	-0.0021843	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.78058	1	8231	8231		30.504	1.3541	1	2793500	+		28454	24432	19052	19062	32278	32278					0.07030350685522535
LIPTLLLVK	9	Unmodified	_LIPTLLLVK_					0	0	0			REV__ENST00000412159.1_1_X:65717811-65717952:+|nuORF	REV__ENST00000412159.1_1_X:65717811-65717952:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.35247802734375	2	505.354628	1008.6947	-0.43	-0.0002173	-1.9655	-0.00099325	-2.3955	-0.0012106	505.35361231717934	55.073	0.83404	55.024	54.744	55.578	-0.049271					34	23	2	0	0	0	0.71772	2	4610	4592;4610		39.253	11.371	1	160540	+		28455	26377	19053	19063	32279;32280	32280					0.19070428452994292
LIPTLLLVK	9	Unmodified	_LIPTLLLVK_					0	0	0			REV__ENST00000412159.1_1_X:65717811-65717952:+|nuORF	REV__ENST00000412159.1_1_X:65717811-65717952:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	505.354628	1008.6947	0.23215	0.00011732	0.38985	0.00019701	0.62201	0.00031433	505.35532968646606	54.853	0.50371	55.259	54.907	55.411	0.40663	0.11242	0.0018969	NaN	39.253	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115140	+		28456	26377	19053	19063							0.19070428452994292
LIPTLLLVK	9	Unmodified	_LIPTLLLVK_					0	0	0			REV__ENST00000412159.1_1_X:65717811-65717952:+|nuORF	REV__ENST00000412159.1_1_X:65717811-65717952:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	505.354628	1008.6947	0.39048	0.00019733	0.042583	2.152E-05	0.43306	0.00021885	505.8556240419907	54.578	0.3775	55.157	55.038	55.415	0.57896	0.010358	0.0015459	NaN	39.253	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183460	+		28457	26377	19053	19063							0.19070428452994292
LIPTRIVE	8	Unmodified	_LIPTRIVE_					0	0	0			REV__ENST00000602573.1_1_4:119200795-119200927:+|nuORF	REV__ENST00000602573.1_1_4:119200795-119200927:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76837158203125	2	470.794935	939.575317	-0.19871	-9.355E-05	0.36231	0.00017057	0.1636	7.7021E-05	470.79490495240964	51.957	0.57613	52.381	51.979	52.555	0.42348					15	13	2	0	0	0	0.4196	1	5202	5202		30.504	11.144	1	225950	+		28458	29331	19054	19064	32281	32281					0.10311234828270699
LIPVKMKD	8	Unmodified	_LIPVKMKD_					0	0	0		CON__Q3MHN2	CON__Q3MHN2	CON__Q3MHN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2882385253906	2	472.285889	942.557224	2.1469	0.001014	2.0105	0.00094952	4.1574	0.0019635	472.2867264071782	114.66	1.2655	114.67	114.37	115.64	0.0094528					102	61	2	0	0	0	0.86288	1	13866	13866		26.796	5.0938	1	83672		+	28459	619	19055	19065	32282	32282					0.08364776581913702
LIPVLLRKLP	10	Unmodified	_LIPVLLRKLP_					0	0	0			REV__ENSG00000129255|ENST00000250124|MPDU1	REV__ENSG00000129255|ENST00000250124|MPDU1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.9055786132812	2	581.407727	1160.8009	0.27248	0.00015842	-3.6485	-0.0021212	-3.376	-0.0019628	581.40539803952	108.96	0.64938	108.99	108.59	109.24	0.034355					68	31	3	0	0	0	0.88106	1	11950	11950		12.207	0.69583	1	3975600	+		28460	18815	19056	19066	32283	32283					0.2269318401831697
LIPWGDVN	8	Unmodified	_LIPWGDVN_					0	0	0			REV__ENSG00000142583|ENST00000377424|SLC2A5	REV__ENSG00000142583|ENST00000377424|SLC2A5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.26422119140625	2	457.242535	912.470518	-0.94782	-0.00043338	-3.4214	-0.0015644	-4.3693	-0.0019978	457.24024893411774	82.008	0.63433	82.435	82.197	82.831	0.42645					19	15	2	0	0	0	0.4196	1	9481	9481		18.324	0	1	118230	+		28461	19743	19057	19067	32284	32284					0.010781133517070884
LIPYFLTLI	9	Unmodified	_LIPYFLTLI_					0	0	0		ENSG00000157103|ENST00000287766|SLC6A1	ENSG00000157103|ENST00000287766|SLC6A1	ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8401489257812	2	546.838811	1091.66307	0.84844	0.00046396	0.94515	0.00051684	1.7936	0.0009808	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.69914	1	10602	10602		40.573	4.9543	1	43597000			28462	5410	19058	19068	32285	32285					0.12090435699042246
LIQAAKMF	8	Unmodified	_LIQAAKMF_					0	0	0		ENSG00000182993|ENST00000330828|C12orf60	ENSG00000182993|ENST00000330828|C12orf60	ENSG00000182993|ENST00000330828|C12orf60	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	461.2657165527344	2	461.264956	920.515359	-1.0648	-0.00049114	1.1214	0.00051727	0.056663	2.6137E-05	461.26543932022855	93.43	1.414	93.43	92.938	94.352	0					57	32	2	0	0	0	0.81548	1	9238	9238		20.482	0.48506	1	637680			28463	7491	19059	19069	32286	32286					0.051922208933888214
LIQAAKMF	8	Unmodified	_LIQAAKMF_					0	0	0		ENSG00000182993|ENST00000330828|C12orf60	ENSG00000182993|ENST00000330828|C12orf60	ENSG00000182993|ENST00000330828|C12orf60	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	461.26495361328125	2	461.264956	920.515359	0.65042	0.00030002	-0.42465	-0.00019588	0.22577	0.00010414	461.2645901499701	92.955	1.6766	93.001	92.496	94.172	0.045448					111	39	4	0	0	0	0.81548	1	9739	9739		20.482	1.1219	1	1185800			28464	7491	19059	19069	32287	32287					0.051922208933888214
LIQACDHH	8	Unmodified	_LIQACDHH_					0	0	0		ENST00000467525.5_2_1:161479802-161487805:+|nuORF	ENST00000467525.5_2_1:161479802-161487805:+|nuORF	ENST00000467525.5_2_1:161479802-161487805:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72332763671875	2	468.721444	935.428335	-0.013184	-6.1798E-06	3.638	0.0017052	3.6249	0.001699	468.7232380662735	77.148	2.5429	77.547	77.268	79.811	0.3997					145	61	5	0	0	0	0.92457	1	8861	8861		47.916	5.4411	1	15095000			28465	12157	19060	19070	32288	32288					-0.041961853283282835
LIQATSYW	8	Unmodified	_LIQATSYW_					0	0	0			REV__nc|ENSG00000214946|Q86UD7|TBC1D26	REV__nc|ENSG00000214946|Q86UD7|TBC1D26	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.26702880859375	2	491.255643	980.496732	-0.080324	-3.946E-05	0.50139	0.00024631	0.42107	0.00020685	491.25540596615593	85.081	0.74355	85.148	84.985	85.729	0.067192					22	16	2	0	0	0	0.4196	1	8550	8550		52.299	18.784	1	44438	+		28466	30202	19061	19071	32289	32289					0.005703825231876181
LIQDGALL	8	Unmodified	_LIQDGALL_					0	0	0			REV__ENSG00000139517|ENST00000316334|LNX2	REV__ENSG00000139517|ENST00000316334|LNX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.751708984375	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.86791	1	7145	7145		28.254	0	1	423780	+		28467	19545	19062	19072	32290	32290					0.06383284011531032
LIQDYFRKFKK	11	Unmodified	_LIQDYFRKFKK_					0	0	0		nc|ENSG00000157388|Q01668-3|CACNA1D;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000157388|Q01668-2|CACNA1D;nc|ENSG00000157388|Q01668-4|CACNA1D	nc|ENSG00000157388|Q01668-3|CACNA1D	nc|ENSG00000157388|Q01668-3|CACNA1D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.95806884765625	3	495.9574	1484.85037	2.5901	0.0012846	-0.088898	-4.4089E-05	2.5012	0.0012405	495.9572429901521	102.14	1.1863	102.44	101.79	102.98	0.29864					72	27	3	0	0	0	0.77205	1	12495	12495		17.167	1.2461	1	327260			28468	5426	19063	19073	32291	32291					0.1273384723642721
LIQGKARSA	9	Unmodified	_LIQGKARSA_					0	0	0		ENSG00000269313|ENST00000595224|MAGIX;nc|ENSG00000269313|Q9H6Y5-3|MAGIX;nc|ENSG00000269313|Q9H6Y5-2|MAGIX	ENSG00000269313|ENST00000595224|MAGIX	ENSG00000269313|ENST00000595224|MAGIX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28607177734375	2	472.287808	942.561064	2.799	0.001322	-1.6986	-0.00080222	1.1005	0.00051974	472.28731595606604	102.41	1.2058	102.36	101.75	102.95	-0.047005					48	28	2	0	0	0	0.7932	1	11179	11179		21.96	1.4781	1	215870			28469	8968	19064	19074	32292	32292					0.08748582399982752
LIQGTLEKVSA	11	Unmodified	_LIQGTLEKVSA_					0	0	0		nc|ENSG00000183981|A6NCF6|MAGEA13P	nc|ENSG00000183981|A6NCF6|MAGEA13P	nc|ENSG00000183981|A6NCF6|MAGEA13P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.8436889648438	2	579.840071	1157.66559	3.115	0.0018062	3.3738	0.0019563	6.4888	0.0037625	579.8421153406522	102.31	1.4996	102.26	101.49	102.99	-0.047005					86	35	4	0	0	0	0.7144	1	11195	11195		29.17	2.1227	1	1243200			28470	15146	19065	19075	32293	32293					0.09306239366037516
LIQHFALLITN	11	Unmodified	_LIQHFALLITN_					0	0	0		ENST00000268251.12_1_16:8876558-8876786:+|nuORF	ENST00000268251.12_1_16:8876558-8876786:+|nuORF	ENST00000268251.12_1_16:8876558-8876786:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8821411132812	2	641.87953	1281.74451	0.91411	0.00058675	3.6201	0.0023236	4.5342	0.0029104	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.58425	1	10005	10005		45.972	4.5456	1	4136300			28471	9537	19066	19076	32294	32294					0.11490511391002656
LIQKEIKYRLI	11	Unmodified	_LIQKEIKYRLI_					0	0	0			REV__ENSG00000137501|ENST00000359152|SYTL2	REV__ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.971435546875	3	472.969417	1415.88642	-0.70225	-0.00033214	3.9146	0.0018515	3.2124	0.0015193	472.9712636412795	49.393	3.7524	49.369	48.706	52.459	-0.024033					207	93	4	0	0	0	0.76251	1	4377	4377		19.263	9.1588	1	1446100	+		28472	19388	19067	19077	32295	32295					0.1951130441332225
LIQKFVFTIKS	11	Unmodified	_LIQKFVFTIKS_					0	0	0			REV__ENST00000551503.5_1_12:46849617-46849752:+|nuORF	REV__ENST00000551503.5_1_12:46849617-46849752:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2730712890625	3	441.939346	1322.79621	-1.6543	-0.0007311	2.8837	0.0012744	1.2294	0.00054333	441.9404880038731	55.736	1.19	55.736	54.998	56.188	0					100	33	4	0	0	0	0.76892	1	4692	4692		17.833	4.3252	1	347630	+		28473	28608	19068	19078	32296	32296					0.1477225508488118
LIQKFVFTIKS	11	Unmodified	_LIQKFVFTIKS_					0	0	0			REV__ENST00000551503.5_1_12:46849617-46849752:+|nuORF	REV__ENST00000551503.5_1_12:46849617-46849752:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.93975830078125	3	441.939346	1322.79621	0.33265	0.00014701	0.6876	0.00030388	1.0203	0.00045089	441.9395069624772	55.282	1.2267	55.373	54.736	55.962	0.091167					101	37	4	0	0	0	0.76892	1	4667	4667		17.833	0.36513	1	451030	+		28474	28608	19068	19078	32297	32297					0.1477225508488118
LIQKLKSFISF	11	Unmodified	_LIQKLKSFISF_					0	0	0		nc|ENSG00000147257|P51654-2|GPC3;ENSG00000147257|ENST00000370818|GPC3;nc|ENSG00000147257|P51654-3|GPC3;chrX:133700028-133704205|14|10.64|0.23|5.54|-|ENST00000394299|GPC3,GPC3	nc|ENSG00000147257|P51654-2|GPC3	nc|ENSG00000147257|P51654-2|GPC3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.9402770996094	3	441.939346	1322.79621	-1.6543	-0.0007311	2.8837	0.0012744	1.2294	0.00054333	441.9404880038731	55.736	1.19	55.736	54.998	56.188	0					100	33	4	0	0	0	0.76579	1	4670	4670		18.531	1.3643	1	347630			28475	543	19069	19079	32298	32298					0.1477225508488118
LIQKLKSFISF	11	Unmodified	_LIQKLKSFISF_					0	0	0		nc|ENSG00000147257|P51654-2|GPC3;ENSG00000147257|ENST00000370818|GPC3;nc|ENSG00000147257|P51654-3|GPC3;chrX:133700028-133704205|14|10.64|0.23|5.54|-|ENST00000394299|GPC3,GPC3	nc|ENSG00000147257|P51654-2|GPC3	nc|ENSG00000147257|P51654-2|GPC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9389953613281	3	441.939346	1322.79621	-0.67662	-0.00029902	1.5818	0.00069906	0.90519	0.00040004	441.93996604387434	56.404	1.0058	56.378	55.754	56.759	-0.026108					84	47	2	0	0	0	0.77205	1	4788	4788		17.167	1.2461	1	784320			28476	543	19069	19079	32299	32299					0.1477225508488118
LIQKRPAPKTN	11	Unmodified	_LIQKRPAPKTN_					0	0	0			REV__ENST00000528758.1_1_11:7507087-7531416:+|nuORF	REV__ENST00000528758.1_1_11:7507087-7531416:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5921630859375	3	422.594461	1264.76155	-1.7406	-0.00073557	-2.5077	-0.0010597	-4.2483	-0.0017953	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.75779	1	3834	3834		20.315	0.28454	1	1126900	+		28477	28254	19070	19080	32300	32300					0.13976431996798055
LIQLKFHQ	8	Unmodified	_LIQLKFHQ_					0	0	0		ENST00000465952.5_1_13:31192116-31195964:+|nuORF	ENST00000465952.5_1_13:31192116-31195964:+|nuORF	ENST00000465952.5_1_13:31192116-31195964:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8078002929688	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.86288	1	4124	4124		26.796	0	1	926440			28478	12118	19071	19081	32301	32301					0.0904234343945518
LIQNFKQDL	9	Unmodified	_LIQNFKQDL_					0	0	0		ENSG00000186188|ENST00000371481|FFAR4;nc|ENSG00000186188|Q5NUL3-1|FFAR4	ENSG00000186188|ENST00000371481|FFAR4	ENSG00000186188|ENST00000371481|FFAR4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.2743530273438	2	559.813856	1117.61316	-0.42577	-0.00023835	0.084251	4.7165E-05	-0.34152	-0.00019119	559.8137896501922	57.351	1.0733	57.745	57.326	58.399	0.39407					53	26	3	0	0	0	0.20789	1	5959	5959		49.442	0	1	746470			28479	7782	19072	19082	32302	32302					0.05905701023084475
LIQPGAVKVY	10	Unmodified	_LIQPGAVKVY_					0	0	0		ENSG00000125730|ENST00000245907|C3;ENST00000599899.5_1_19:6677895-6682275:-|nuORF;CON__Q2UVX4	ENSG00000125730|ENST00000245907|C3;CON__Q2UVX4	CON__Q2UVX4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.3323974609375	2	544.329142	1086.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.352	1	98.297	97.797	98.797	-0.054817								0	0	0	0.45132	1	10608	10608		29.15	4.9468	1			+	28480	616;3409	19073	19083	32303	32303					0.10387479408132094
LIQQNASE	8	Unmodified	_LIQQNASE_					0	0	0		ENSG00000184363|ENST00000331563|PKP3;nc|ENSG00000184363|Q9Y446-2|PKP3	ENSG00000184363|ENST00000331563|PKP3	ENSG00000184363|ENST00000331563|PKP3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7502136230469	2	451.732532	901.45051	-0.039923	-1.8034E-05	-1.3582	-0.00061353	-1.3981	-0.00063157	451.73234861239564	33.93	0.47998	33.925	33.737	34.217	-0.0047417					14	10	2	0	0	0	0.4196	1	1998	1998		26.796	17.09	1	24336			28481	7603	19074	19084	32304	32304					-0.004156823789003283
LIQQWMVL	8	Unmodified	_LIQQWMVL_					0	0	0		ENST00000534547.1_1_11:130165680-130166253:+|nuORF	ENST00000534547.1_1_11:130165680-130166253:+|nuORF	ENST00000534547.1_1_11:130165680-130166253:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.31005859375	2	515.791338	1029.56812	0.18641	9.615E-05	-1.0622	-0.00054788	-0.8758	-0.00045173	515.7925297088453	58.456	0.29421	59.009	58.795	59.089	0.55323					9	6	2	0	0	0	0.4196	1	6136	6136		37.028	15.326	1	44194			28482	13410	19075	19085	32305	32305					0.05452178956215903
LIQRPFGI	8	Unmodified	_LIQRPFGI_					0	0	0		nc|ENSG00000112183|Q9BX46-5|RBM24;nc|ENSG00000112183|Q9BX46-2|RBM24;ENSG00000112183|ENST00000379052|RBM24	nc|ENSG00000112183|Q9BX46-5|RBM24	nc|ENSG00000112183|Q9BX46-5|RBM24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2873840332031	2	472.28982	942.565087	-0.91025	-0.0004299	-2.7735	-0.0013099	-3.6837	-0.0017398	472.2885293382865	99.077	1.813	99.3	98.699	100.51	0.22263					102	42	3	0	0	0	0.91005	1	10344	10344		42.474	12.633	1	580890			28483	2638	19076	19086	32306	32306					0.09150671893701201
LIQRQKSA	8	Unmodified	_LIQRQKSA_					0	0	0		ENSG00000171695|ENST00000302096|LKAAEAR1;nc|ENSG00000171695|Q8TD35-2|LKAAEAR1	ENSG00000171695|ENST00000302096|LKAAEAR1	ENSG00000171695|ENST00000302096|LKAAEAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2869567871094	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.89043	1	12360	12360		35.618	2.8059	1	3080300			28484	6697	19077	19087	32307	32307					0.0874858239999412
LIQSRDTV	8	Unmodified	_LIQSRDTV_					0	0	0			REV__nc|ENSG00000055957|P19827-3|ITIH1	REV__nc|ENSG00000055957|P19827-3|ITIH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.265380859375	2	466.263999	930.513445	-0.88011	-0.00041036	1.2728	0.00059348	0.39273	0.00018312	466.2643730930367	36.815	1.3796	36.761	36.157	37.537	-0.053558					53	30	3	0	0	0	0.72312	1	2466	2466		66.429	0.6261	1	260880	+		28485	16415	19078	19088	32308	32308					0.04540883409151775
LIQSRDTV	8	Unmodified	_LIQSRDTV_					0	0	0			REV__nc|ENSG00000055957|P19827-3|ITIH1	REV__nc|ENSG00000055957|P19827-3|ITIH1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	466.263999	930.513445	-0.88011	-0.00041036	1.2728	0.00059348	0.39273	0.00018312	466.2643730930367	36.815	1.3796	36.761	36.157	37.537	-0.053558	0	0	NaN	66.429	53	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	260880	+		28486	16415	19078	19088							0.04540883409151775
LIQTARKN	8	Unmodified	_LIQTARKN_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2877197265625	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.8347	1	10489	10489		23.042	2.5607	1	50843000	+		28487	22575	19079	19089	32309	32309					0.0874858239999412
LIQVGLEPHM	10	Unmodified	_LIQVGLEPHM_					0	0	0			REV__ENST00000370069.5_1_20:62220735-62220903:-|nuORF	REV__ENST00000370069.5_1_20:62220735-62220903:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.8136596679688	2	568.810259	1135.60597	-0.33028	-0.00018787	3.1171	0.001773	2.7868	0.0015851	569.3120668126	58.129	0.76871	58.113	57.811	58.58	-0.01643					80	32	4	0	0	0	0.8608	1	4930	4930		34.173	3.6689	1	146260	+		28488	25640	19080	19090	32310	32310					0.04358645151023666
LIRAILKVPED	11	Unmodified	_LIRAILKVPED_					0	0	0		ENST00000497655.1_1_1:202932056-202932895:-|nuORF;ENSG00000159348|ENST00000367249|CYB5R1	ENST00000497655.1_1_1:202932056-202932895:-|nuORF	ENST00000497655.1_1_1:202932056-202932895:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.3687744140625	2	633.892638	1265.77072	2.3249	0.0014737	-0.32738	-0.00020752	1.9975	0.0012662	633.8917422578321	98.066	0.34029	98.011	97.815	98.156	-0.055542					9	7	2	0	0	0	0.1731	1	10559	10559		35.152	4.8343	1	87049			28489	5525	19081	19091	32311	32311					0.14846780562470485
LIRAQYKGT	9	Unmodified	_LIRAQYKGT_					0	0	0			REV__ENSG00000196208|ENST00000381486|GREB1	REV__ENSG00000196208|ENST00000381486|GREB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.9812622070312	2	525.308741	1048.60293	4.3706	0.0022959	3.7663	0.0019785	8.1369	0.0042744	525.8133681798666	106.13	0.67313	106.32	105.97	106.64	0.18647					74	28	4	0	0	0	0.20789	1	12963	12963		21.96	0	1	163420	+		28490	23104	19082	19092	32312	32312					0.08057138088520333
LIRFHPLAE	9	Unmodified	_LIRFHPLAE_					0	0	0		ENSG00000198786|ENST00000361567|MT-ND5	ENSG00000198786|ENST00000361567|MT-ND5	ENSG00000198786|ENST00000361567|MT-ND5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3195190429688	2	548.319109	1094.62366	-0.48454	-0.00026568	-1.1229	-0.00061573	-1.6075	-0.00088141	548.3184558335702	109.55	0.33806	109.5	109.37	109.7	-0.049324					28	17	2	0	0	0	0.7932	1	11921	11921		18.324	0	1	1365800			28491	8332	19083	19093	32313	32313					0.0801372846817685
LIRGVLADLLW	11	Unmodified	_LIRGVLADLLW_					0	0	0			REV__nc|ENSG00000139835|Q5TC63-3|GRTP1	REV__nc|ENSG00000139835|Q5TC63-3|GRTP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5975646972656	3	423.595691	1267.76524	2.8995	0.0012282	1.7133	0.00072574	4.6128	0.0019539	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.75495	2	11587	11587;11599		13.508	0	1	6928400	+		28492	19574	19084	19094	32314;32315	32314					0.14207101770648478
LIRHGRGQIDL	11	Unmodified	_LIRHGRGQIDL_					0	0	0			REV__ENST00000439461.5_1_19:52772835-52786550:+|nuORF	REV__ENST00000439461.5_1_19:52772835-52786550:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.585693359375	3	426.586077	1276.7364	0.43197	0.00018427	-1.0029	-0.00042782	-0.57092	-0.00024355	426.58581260955526	17.907	0.5297	17.285	17.101	17.631	-0.62141					18	12	2	0	0	0	0.70584	1	318	318		30.569	0	1	292700	+		28493	26731	19085	19095	32316	32316					0.10910377194250032
LIRHKRIHTR	10	Unmodified	_LIRHKRIHTR_					0	0	0		ENSG00000234444|ENST00000423484|ZNF736	ENSG00000234444|ENST00000423484|ZNF736	ENSG00000234444|ENST00000423484|ZNF736	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	443.94873046875	3	443.949461	1328.82655	-1.7953	-0.00079702	-0.19877	-8.8244E-05	-1.9941	-0.00088526	443.94928172619956	107.19	1.163	107.22	106.63	107.79	0.036118					84	27	4	0	0	0	0.86621	1	11460	11460		26.063	3.5018	1	1391200			28494	8744	19086	19096	32317	32317					0.17529471313287104
LIRHTKAKATE	11	Unmodified	_LIRHTKAKATE_					0	0	0			REV__ENST00000582471.1_1_17:8275308-8279276:-|nuORF	REV__ENST00000582471.1_1_17:8275308-8279276:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3771362304688	2	634.377686	1266.74082	-0.13802	-8.7559E-05	-0.66981	-0.00042491	-0.80783	-0.00051247	634.3770517234923	117.28	0.25537	117.21	117	117.26	-0.07531					24	8	3	0	0	0	0.69931	1	12578	12578		31.634	0	1	1742800	+		28495	29061	19087	19097	32318	32318					0.11811841617122809
LIRHTKAKATE	11	Unmodified	_LIRHTKAKATE_					0	0	0			REV__ENST00000582471.1_1_17:8275308-8279276:-|nuORF	REV__ENST00000582471.1_1_17:8275308-8279276:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3765258789062	2	634.377686	1266.74082	1.3188	0.00083664	-1.7871	-0.0011337	-0.46828	-0.00029707	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.66009	4	12798	12690;12791;12798;12959		37.508	7.1905	1	12917000	+		28496	29061	19087	19097	32319;32320;32321;32322	32321					0.11811841617122809
LIRHTKAKATE	11	Unmodified	_LIRHTKAKATE_					0	0	0			REV__ENST00000582471.1_1_17:8275308-8279276:-|nuORF	REV__ENST00000582471.1_1_17:8275308-8279276:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3758544921875	2	634.377686	1266.74082	0.93394	0.00059247	-2.1331	-0.0013532	-1.1991	-0.00076069	634.3760615979032	111.89	0.64575	111.96	111.47	112.12	0.069542					57	19	4	0	0	0	0.7342	1	12049	12049		25.574	1.0549	1	7169800	+		28497	29061	19087	19097	32323	32323					0.11811841617122809
LIRHTKAKATE	11	Unmodified	_LIRHTKAKATE_					0	0	0			REV__ENST00000582471.1_1_17:8275308-8279276:-|nuORF	REV__ENST00000582471.1_1_17:8275308-8279276:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3768310546875	2	634.377686	1266.74082	-1.1773	-0.00074688	0.036396	2.3089E-05	-1.1409	-0.00072379	634.3774291341157	112.05	1.1748	112.03	111.8	112.98	-0.019882					84	36	4	0	0	0	0.64498	1	11944	11944		39.253	7.723	1	22589000	+		28498	29061	19087	19097	32324	32324					0.11811841617122809
LIRHWDILTRT	11	Unmodified	_LIRHWDILTRT_					0	0	0			REV__ENSG00000177938|ENST00000317658|CAPZA3	REV__ENSG00000177938|ENST00000317658|CAPZA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.2782897949219	3	475.277132	1422.80957	-0.65142	-0.0003096	3.3168	0.0015764	2.6654	0.0012668	475.2786104903565	58.659	1.4926	59.051	58.482	59.974	0.39209					112	35	5	0	0	0	0.75457	1	6157	6157		21.032	1.7696	1	2262000	+		28499	22238	19088	19098	32325	32325					0.11507505916802074
LIRHWDILTRT	11	Unmodified	_LIRHWDILTRT_					0	0	0			REV__ENSG00000177938|ENST00000317658|CAPZA3	REV__ENSG00000177938|ENST00000317658|CAPZA3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	475.277132	1422.80957	-0.65142	-0.0003096	3.3168	0.0015764	2.6654	0.0012668	475.2786104903565	58.659	1.4926	59.051	58.482	59.974	0.39209	0.0027648	-0.0003715	NaN	21.032	112	35	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2262000	+		28500	22238	19088	19098							0.11507505916802074
LIRIIDKR	8	Unmodified	_LIRIIDKR_					0	0	0			REV__nc|ENSG00000172673|Q8N1K5-3|THEMIS	REV__nc|ENSG00000172673|Q8N1K5-3|THEMIS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.8654174804688	2	513.842751	1025.67095	0.9132	0.00046924	-1.0466	-0.00053781	-0.13344	-6.8568E-05	513.8421314169407	22.959	0.50748	22.376	22.103	22.611	-0.58328					18	12	2	0	0	0	0.4196	1	1009	1009		34.173	3.6689	1	70167	+		28501	21847	19089	19099	32326	32326					0.15914007739161207
LIRIRTPQLAE	11	Unmodified	_LIRIRTPQLAE_					0	0	0			REV__ENSG00000078898|ENST00000170150|BPIFB2	REV__ENSG00000078898|ENST00000170150|BPIFB2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.3844299316406	3	437.269866	1308.78777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.852	1	16.828	16.328	17.328	-0.024035								0	0	0	0.56276	1	187	187		26.75	5.064	1		+		28502	16774	19090	19100	32327	32327					0.14572701168299318
LIRIWKLYIKS	11	Unmodified	_LIRIWKLYIKS_					0	0	0		nc|ENSG00000134759|Q6IA86-4|ELP2;ENST00000536373.5_1_18:33718798-33725056:+|nuORF;nc|ENSG00000134759|Q6IA86-7|ELP2;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;ENSG00000134759|ENST00000358232|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2	nc|ENSG00000134759|Q6IA86-4|ELP2	nc|ENSG00000134759|Q6IA86-4|ELP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97369384765625	3	478.30614	1431.89659	0.39613	0.00018947	3.4314	0.0016413	3.8275	0.0018307	478.64293190483863	57.93	2.026	58.04	57.402	59.429	0.11027					207	90	5	0	0	0	0.17863	1	5070	5070		9.6461	3.3253	1	367440			28503	14935	19091	19101	32328	32328					0.1979191213854392
LIRIYAQYSMY	11	Unmodified	_LIRIYAQYSMY_					0	0	0			REV__nc|ENSG00000123572|Q7Z2Y5-2|NRK	REV__nc|ENSG00000123572|Q7Z2Y5-2|NRK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	474.2489318847656	3	474.247962	1419.72206	0.38785	0.00018394	-0.45956	-0.00021794	-0.071701	-3.4004E-05	474.2478013564301	28.226	0.59696	28.262	28.021	28.618	0.03607					44	20	3	0	0	0	0.76251	1	1319	1319		19.263	1.4295	1	75066	+		28504	18546	19092	19102	32329	32329					0.028985439310645233
LIRKVLES	8	Unmodified	_LIRKVLES_					0	0	0			REV__ENST00000512145.1_1_6:18237336-18256602:-|nuORF	REV__ENST00000512145.1_1_6:18237336-18256602:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8049011230469	2	479.30821	956.601866	-1.1844	-0.00056769	-1.0387	-0.00049788	-2.2231	-0.0010656	479.3076349801938	41.276	0.70533	41.235	40.825	41.53	-0.040806					26	19	2	0	0	0	0.4196	1	3118	3118		12.207	0.69583	1	115070	+		28505	18615	19093	19103	32330	32330					0.12182923719603878
LIRLARHSLE	10	Unmodified	_LIRLARHSLE_					0	0	0		nc|ENSG00000103932|Q9BWH6-2|RPAP1;ENSG00000103932|ENST00000304330|RPAP1	nc|ENSG00000103932|Q9BWH6-2|RPAP1	nc|ENSG00000103932|Q9BWH6-2|RPAP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3668212890625	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.39	1	116.37	115.87	116.87	-0.02433								0	0	0	0.45132	1	12888	12888		20.947	5.3051	1				28506	2105	19094	19104	32331	32331					0.12459876308275852
LIRLARHSLE	10	Unmodified	_LIRLARHSLE_					0	0	0		nc|ENSG00000103932|Q9BWH6-2|RPAP1;ENSG00000103932|ENST00000304330|RPAP1	nc|ENSG00000103932|Q9BWH6-2|RPAP1	nc|ENSG00000103932|Q9BWH6-2|RPAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2469482421875	3	403.247173	1206.71969	-1.9293	-0.00077799	1.1746	0.00047366	-0.7547	-0.00030433	403.24758115209465	104.53	3.0767	104.62	103.79	106.87	0.093857					248	75	5	0	0	0	0.86763	1	11124	11124		31.634	13.103	1	9819800			28507	2105	19094	19104	32332	32332					0.12459876308275852
LIRLARHSLE	10	Unmodified	_LIRLARHSLE_					0	0	0		nc|ENSG00000103932|Q9BWH6-2|RPAP1;ENSG00000103932|ENST00000304330|RPAP1	nc|ENSG00000103932|Q9BWH6-2|RPAP1	nc|ENSG00000103932|Q9BWH6-2|RPAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3641357421875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85438	2	12779	12652;12779		30.504	3.7075	1	3346600			28508	2105	19094	19104	32333;32334	32334					0.12459876308275852
LIRLDGRTG	9	Unmodified	_LIRLDGRTG_					0	0	0			REV__ENST00000573525.1_1_16:2962029-2979726:+|nuORF	REV__ENST00000573525.1_1_16:2962029-2979726:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.79913330078125	2	500.79854	999.582528	-0.83514	-0.00041824	-1.3028	-0.00065244	-2.1379	-0.0010707	500.7979469988337	94.638	1.5103	94.638	94.104	95.614	0					48	35	2	0	0	0	0.78536	1	9413	9413		29.15	0	1	183430	+		28509	28962	19095	19105	32335	32335					0.08271967428697735
LIRLLKQKLK	10	Unmodified	_LIRLLKQKLK_					0	0	0		ENST00000584588.5_1_17:38027782-38031519:+|nuORF	ENST00000584588.5_1_17:38027782-38031519:+|nuORF	ENST00000584588.5_1_17:38027782-38031519:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.296630859375	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.67	1	77.07	76.57	77.57	0.39969								0	0	0	0.45132	1	8709	8709		11.097	0.99287	1				28510	14136	19096	19106	32336	32336					0.25959946829675573
LIRLQKAKLT	10	Unmodified	_LIRLQKAKLT_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	592.3960571289062	2	592.39789	1182.78123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.768	1	47.787	47.287	48.287	0.018967								0	0	0	0.45132	1	3594	3594		19.997	0.6368	1		+		28511	22085	19097	19107	32337	32337					0.19714808007529427
LIRLVTQSRLN	11	Unmodified	_LIRLVTQSRLN_					0	0	0			REV__nc|ENSG00000108852|Q14168-4|MPP2	REV__nc|ENSG00000108852|Q14168-4|MPP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2730712890625	3	438.273499	1311.79867	-0.96188	-0.00042157	0.011679	5.1187E-06	-0.9502	-0.00041645	438.27344423982936	106.61	0.75021	106.61	106.14	106.89	0					48	16	4	0	0	0	0.77511	1	11033	11033		16.53	0.6092	1	872140	+		28512	29772	19098	19108	32338	32338					0.1552410354256608
LIRLVTQSRLN	11	Unmodified	_LIRLVTQSRLN_					0	0	0			REV__nc|ENSG00000108852|Q14168-4|MPP2	REV__nc|ENSG00000108852|Q14168-4|MPP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2728576660156	3	438.273499	1311.79867	-0.96199	-0.00042161	-0.26536	-0.0001163	-1.2273	-0.00053791	438.2732841967114	107.57	0.99143	107.57	106.84	107.83	0					91	23	5	0	0	0	0.74405	1	11092	11092		23.378	4.1152	1	3871200	+		28513	29772	19098	19108	32339	32339					0.1552410354256608
LIRLVTQSRLN	11	Unmodified	_LIRLVTQSRLN_					0	0	0			REV__nc|ENSG00000108852|Q14168-4|MPP2	REV__nc|ENSG00000108852|Q14168-4|MPP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2730407714844	3	438.273499	1311.79867	-0.15875	-6.9576E-05	-1.1014	-0.0004827	-1.2601	-0.00055228	438.27291084215926	107.41	0.8759	107.38	106.95	107.82	-0.034409					90	20	5	0	0	0	0.69071	3	11716	11694;11705;11716		33.039	1.9713	1	4015900	+		28514	29772	19098	19108	32340;32341;32342	32342					0.1552410354256608
LIRLVTQSRLN	11	Unmodified	_LIRLVTQSRLN_					0	0	0			REV__nc|ENSG00000108852|Q14168-4|MPP2	REV__nc|ENSG00000108852|Q14168-4|MPP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2731628417969	3	438.273499	1311.79867	-1.4635	-0.00064141	0.29289	0.00012837	-1.1706	-0.00051305	438.27353644756727	106.01	0.81467	106.16	105.83	106.65	0.14843					89	19	6	0	0	0	0.74405	1	11391	11391		23.378	0	1	14795000	+		28515	29772	19098	19108	32343	32343					0.1552410354256608
LIRLVTQSRLN	11	Unmodified	_LIRLVTQSRLN_					0	0	0			REV__nc|ENSG00000108852|Q14168-4|MPP2	REV__nc|ENSG00000108852|Q14168-4|MPP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2730407714844	3	438.273499	1311.79867	-1.4634	-0.00064136	0.1078	4.7245E-05	-1.3556	-0.00059411	438.2734550831373	106.96	1.4325	107.1	106.6	108.03	0.14105					150	35	5	0	0	0	0.74405	1	11463	11463		23.378	3.3474	1	5372900	+		28516	29772	19098	19108	32344	32344					0.1552410354256608
LIRLVTQSRLN	11	Unmodified	_LIRLVTQSRLN_					0	0	0			REV__nc|ENSG00000108852|Q14168-4|MPP2	REV__nc|ENSG00000108852|Q14168-4|MPP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2730712890625	3	438.273499	1311.79867	0.73903	0.0003239	-2.0576	-0.00090178	-1.3185	-0.00057788	438.2725101796097	107.07	1.2292	107.16	106.69	107.92	0.091255					130	29	5	0	0	0	0.72892	1	11558	11558		26.75	4.9693	1	4759800	+		28517	29772	19098	19108	32345	32345					0.1552410354256608
LIRLVTQSRLN	11	Unmodified	_LIRLVTQSRLN_					0	0	0			REV__nc|ENSG00000108852|Q14168-4|MPP2	REV__nc|ENSG00000108852|Q14168-4|MPP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2730712890625	3	438.273499	1311.79867	-1.813	-0.00079457	0.66137	0.00028986	-1.1516	-0.00050471	438.27366907360886	106.16	0.83208	106.21	105.86	106.69	0.053757					80	19	5	0	0	0	0.74405	1	11303	11303		23.378	0	1	5030100	+		28518	29772	19098	19108	32346	32346					0.1552410354256608
LIRLVTQSRLN	11	Unmodified	_LIRLVTQSRLN_					0	0	0			REV__nc|ENSG00000108852|Q14168-4|MPP2	REV__nc|ENSG00000108852|Q14168-4|MPP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2730407714844	3	438.273499	1311.79867	-1.813	-0.00079457	0.59005	0.0002586	-1.2229	-0.00053597	438.2736679941031	107.15	1.2018	107.19	106.63	107.83	0.036118					118	28	5	0	0	0	0.74405	2	11410	11410;11435		23.378	3.3474	1	2816400	+		28519	29772	19098	19108	32347;32348	32347					0.1552410354256608
LIRPLLLPDLC	11	Unmodified	_LIRPLLLPDLC_					0	0	0			REV__ENST00000470853.1_1_7:86541162-86542454:-|nuORF	REV__ENST00000470853.1_1_7:86541162-86542454:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.384033203125	2	633.386134	1264.75771	1.3848	0.00087709	-2.6545	-0.0016813	-1.2698	-0.00080424	633.3842375425138	51.028	1.3794	51.063	50.434	51.813	0.034588					70	42	3	0	0	0	0.74771	1	4066	4066		25.574	7.312	1	117580	+		28520	27220	19099	19109	32349	32349					0.13592626178729006
LIRQQPVPTR	10	Unmodified	_LIRQQPVPTR_					0	0	0			REV__ENSG00000040731|ENST00000264463|CDH10	REV__ENSG00000040731|ENST00000264463|CDH10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3662719726562	2	604.367121	1206.71969	1.0484	0.00063359	-2.1061	-0.0012728	-1.0577	-0.00063923	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.86471	1	11433	11433		30.318	2.2362	1	105850000	+		28521	16320	19100	19110	32350	32350					0.12459876308253115
LIRRASQQLWL	11	Unmodified	_LIRRASQQLWL_					0	0	0			REV__ENST00000511521.1_1_4:78784023-78784152:+|nuORF	REV__ENST00000511521.1_1_4:78784023-78784152:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.94793701171875	3	461.945494	1382.81465	2.7792	0.0012839	3.2357	0.0014947	6.015	0.0027786	461.94697066502204	112.87	7.7849	112.84	112.19	119.97	-0.024811					433	277	2	0	0	0	0.76251	1	12437	12437		19.263	1.4295	1	2186600	+		28522	27971	19101	19111	32351	32351					0.13855809779465744
LIRRELDS	8	Unmodified	_LIRRELDS_					0	0	0			REV__ENSG00000136750|ENST00000376261|GAD2	REV__ENSG00000136750|ENST00000376261|GAD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.290283203125	2	501.290548	1000.56654	-0.45423	-0.0002277	0.14645	7.3413E-05	-0.30779	-0.00015429	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.90983	1	10348	10348		42.396	3.59	1	9727400	+		28523	19331	19102	19112	32352	32352					0.06628261191792717
LIRRFKKTIIE	11	Unmodified	_LIRRFKKTIIE_					0	0	0		ENSG00000180815|ENST00000338883|MAP3K15	ENSG00000180815|ENST00000338883|MAP3K15	ENSG00000180815|ENST00000338883|MAP3K15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.97100830078125	3	472.973161	1415.89765	-0.95095	-0.00044977	-3.7122	-0.0017558	-4.6632	-0.0022056	472.971385713144	49.546	3.8081	49.55	48.972	52.78	0.0035973					232	95	4	0	0	0	0.77803	1	4209	4209		15.921	1.8346	1	1400600			28524	7349	19103	19113	32353	32353					0.2063412650745704
LIRSLTTKGS	10	Unmodified	_LIRSLTTKGS_					0	0	0			REV__ENST00000475731.1_1_13:33092134-33109967:-|nuORF	REV__ENST00000475731.1_1_13:33092134-33109967:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.326416015625	2	538.327131	1074.63971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.68	1	113.71	113.21	114.21	0.027321								0	0	0	0.45132	1	12428	12428		16.473	0	1		+		28525	23855	19104	19114	32354	32354					0.10537389914406958
LIRSPPKGAWP	11	Unmodified	_LIRSPPKGAWP_					0	0	0			REV__ENST00000396957.5_2_3:12881714-12883025:-|nuORF	REV__ENST00000396957.5_2_3:12881714-12883025:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	407.9117736816406	3	407.908269	1220.70298	0.46014	0.0001877	3.8853	0.0015848	4.3454	0.0017725	407.90987748389716	16.111	0.20723	16.087	15.958	16.165	-0.024035					12	8	2	0	0	0	0.76699	1	110	110		16.53	0	1	59782	+		28526	26152	19105	19115	32355	32355					0.10145375422325742
LISAEVIVP	9	Unmodified	_LISAEVIVP_					0	0	0		ENST00000550858.1_1_12:42681771-42682359:+|nuORF	ENST00000550858.1_1_12:42681771-42682359:+|nuORF	ENST00000550858.1_1_12:42681771-42682359:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7887268066406	2	470.789318	939.564084	-1.7868	-0.00084119	3.031	0.001427	1.2443	0.00058579	470.7906139736521	40.476	1.2312	40.476	39.584	40.815	0					64	34	2	0	0	0	0.7932	1	2610	2610		26.796	1.3459	1	120330			28527	13662	19106	19116	32356	32356					0.09188412734135909
LISALTWKR	9	Unmodified	_LISALTWKR_					0	0	0		ENSG00000171450|ENST00000302625|CDK5R2	ENSG00000171450|ENST00000302625|CDK5R2	ENSG00000171450|ENST00000302625|CDK5R2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.3326416015625	2	544.334759	1086.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.172	1	98.399	97.899	98.899	0.22787								0	0	0	0.30778	1	10177	10177		27.882	2.3082	1				28528	6664	19107	19117	32357	32357					0.11510301502266884
LISALVVDPPI	11	Unmodified	_LISALVVDPPI_					0	0	0			REV__ENSG00000099219|ENST00000339450|ERMP1	REV__ENSG00000099219|ENST00000339450|ERMP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.8531494140625	2	568.849907	1135.68526	2.887	0.0016423	2.6801	0.0015246	5.5671	0.0031668	568.8513377958367	102.33	3.4335	102.28	101.79	105.22	-0.047005					328	82	6	0	0	0	0.63176	4	11229	11229;11253;11265;11314		40.778	5.5774	1	53482000	+		28529	17084	19108	19118	32358;32359;32360;32361	32358					0.12284615376802321
LISEIIRLST	10	Unmodified	_LISEIIRLST_					0	0	0			REV__ENST00000313116.11_1_X:47307133-47307340:-|nuORF	REV__ENST00000313116.11_1_X:47307133-47307340:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.8347778320312	2	572.850438	1143.68632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.61	1	115.71	115.21	116.21	0.094063								0	0	0	0.45132	1	12321	12321		9.7057	1.012	1		+		28530	24922	19109	19119	32362	32362					0.12022829745706076
LISEQLQQLH	10	Unmodified	_LISEQLQQLH_					0	0	0		ENSG00000204624|ENST00000294484|DISP3;nc|ENSG00000204624|Q9P2K9-2|DISP3	ENSG00000204624|ENST00000294484|DISP3	ENSG00000204624|ENST00000294484|DISP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.3342895507812	2	604.83532	1207.65609	0.96039	0.00058088	-0.96229	-0.00058203	-0.001899	-1.1486E-06	604.8346766250929	50.053	0.63105	50.082	49.823	50.455	0.029629					34	17	3	0	0	0	0.81191	1	3942	3942		41.427	9.7923	1	246340			28531	8470	19110	19120	32363	32363					0.060564710805238064
LISEVPGGGL	10	Unmodified	_LISEVPGGGL_					0	0	0		ENST00000463934.1_1_22:39475113-39475338:+|nuORF	ENST00000463934.1_1_22:39475113-39475338:+|nuORF	ENST00000463934.1_1_22:39475113-39475338:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	471.2845153808594	2	471.26875	940.522947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.435	1	44.377	43.877	44.877	-0.058262								0	0	0	0.45132	1	3130	3130		30.504	1.3541	1				28532	12080	19111	19121	32364	32364					0.0503065169467618
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3033447265625	2	523.301736	1044.58892	-0.83282	-0.00043582	4.2992	0.0022498	3.4663	0.0018139	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.84112	6	8275	8205;8217;8239;8275;8299;8311		37.159	5.3006	1	2778600	+		28533	20145	19112	19122	32365;32366;32367;32368;32369;32370	32368					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3036499023438	2	523.301736	1044.58892	-0.041394	-2.1661E-05	3.4629	0.0018121	3.4215	0.0017905	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.71042	4	8709	8605;8709;8757;8841		44.117	7.67	1	3850300	+		28534	20145	19112	19122	32371;32372;32373;32374	32372					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3035278320312	2	523.301736	1044.58892	-0.041207	-2.1563E-05	3.5312	0.0018479	3.49	0.0018263	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.71042	11	9081	8962;9010;9034;9081;9093;9105;9153;9165;9250;9336;9372		44.117	9.5837	1	12431000	+		28535	20145	19112	19122	32375;32376;32377;32378;32379;32380;32381;32382;32383;32384;32385	32378					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3035278320312	2	523.301736	1044.58892	1.4247	0.00074556	1.9478	0.0010193	3.3725	0.0017648	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.74274	3	8945	8945;8957;8993		42.396	9.5837	1	3882100	+		28536	20145	19112	19122	32386;32387;32388	32386					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3036499023438	2	523.301736	1044.58892	1.699	0.00088911	1.7632	0.00092271	3.4623	0.0018118	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.46422	9	9499	9090;9244;9256;9364;9388;9448;9461;9499;9548		58.782	18.004	1	13080000	+		28537	20145	19112	19122	32389;32390;32391;32392;32393;32394;32395;32396;32397	32396					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3033447265625	2	523.301736	1044.58892	1.0264	0.00053713	2.344	0.0012266	3.3704	0.0017638	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.71042	5	8856	8760;8819;8856;8880;8904		44.117	7.67	1	3817300	+		28538	20145	19112	19122	32398;32399;32400;32401;32402	32400					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3033447265625	2	523.301736	1044.58892	1.1688	0.00061163	2.3066	0.0012071	3.4754	0.0018187	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.71042	10	9155	9096;9120;9155;9167;9191;9227;9239;9263;9361;9411		44.117	9.5837	1	12580000	+		28539	20145	19112	19122	32403;32404;32405;32406;32407;32408;32409;32410;32411;32412	32405					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3032836914062	2	523.301736	1044.58892	-0.178	-9.3149E-05	3.4267	0.0017932	3.2487	0.0017	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.46422	4	8501	8477;8501;8513;8538		58.782	18.004	1	4158500	+		28540	20145	19112	19122	32413;32414;32415;32416	32414					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3034057617188	2	523.301736	1044.58892	-0.1734	-9.0741E-05	3.5089	0.0018362	3.3355	0.0017455	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.5766	14	9043	8622;8646;8765;8777;8824;8860;8872;8884;8896;8956;8968;9005;9029;9043		51.335	11.892	1	13808000	+		28541	20145	19112	19122	32417;32418;32419;32420;32421;32422;32423;32424;32425;32426;32427;32428;32429;32430	32430					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.30322265625	2	523.301736	1044.58892	0.69703	0.00036476	2.6051	0.0013632	3.3021	0.001728	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.85934	3	8499	8451;8499;8582		35.618	5.1146	1	3801600	+		28542	20145	19112	19122	32431;32432;32433	32432					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3034057617188	2	523.301736	1044.58892	0.71899	0.00037625	2.71	0.0014182	3.429	0.0017944	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.5766	12	8762	8679;8762;8833;8953;8978;9015;9052;9064;9113;9125;9185;9218		51.335	9.9088	1	13442000	+		28543	20145	19112	19122	32434;32435;32436;32437;32438;32439;32440;32441;32442;32443;32444;32445	32435					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3035888671875	2	523.301736	1044.58892	0.60955	0.00031898	2.9734	0.001556	3.583	0.001875	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.74274	2	10203	10034;10203		42.396	8.2236	1	4023800	+		28544	20145	19112	19122	32446;32447	32447					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.303466796875	2	523.301736	1044.58892	1.1935	0.00062456	2.3787	0.0012448	3.5722	0.0018693	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.74274	9	10489	10273;10333;10405;10429;10453;10477;10489;10525;10537		42.396	9.5837	1	11944000	+		28545	20145	19112	19122	32448;32449;32450;32451;32452;32453;32454;32455;32456	32454					0.06840724545190824
LISGVLELMA	10	Unmodified	_LISGVLELMA_					0	0	0			REV__ENSG00000149016|ENST00000476907|TUT1	REV__ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3036499023438	2	523.301736	1044.58892	-0.50611	-0.00026485	3.9552	0.0020698	3.4491	0.0018049	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.74274	4	10025	10025;10157;10193;10242		42.396	9.5837	1	3970100	+		28546	20145	19112	19122	32457;32458;32459;32460	32457					0.06840724545190824
LISGVLSY	8	Unmodified	_LISGVLSY_					0	0	0		nc|ENSG00000070748|P28329-3|CHAT;nc|ENSG00000070748|P28329-2|CHAT;ENSG00000070748|ENST00000337653|CHAT	nc|ENSG00000070748|P28329-3|CHAT	nc|ENSG00000070748|P28329-3|CHAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.24603271484375	2	426.247286	850.48002	-1.7038	-0.00072625	-1.2223	-0.00052102	-2.9262	-0.0012473	426.246697883185	87.448	3.9173	87.649	85.72	89.637	0.20114					165	92	2	0	0	0	0.81548	2	8633	8599;8633		25.45	3.4903	1	4015800			28547	1250	19113	19123	32461;32462	32462					0.048798816372254805
LISGVLSY	8	Unmodified	_LISGVLSY_					0	0	0		nc|ENSG00000070748|P28329-3|CHAT;nc|ENSG00000070748|P28329-2|CHAT;ENSG00000070748|ENST00000337653|CHAT	nc|ENSG00000070748|P28329-3|CHAT	nc|ENSG00000070748|P28329-3|CHAT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2459411621094	2	426.247286	850.48002	0.55578	0.0002369	-3.442	-0.0014671	-2.8862	-0.0012302	426.24575751127946	87.37	3.4516	87.816	85.746	89.198	0.44628					161	83	2	0	0	0	0.86288	1	10232	10232		26.796	0	1	2779100			28548	1250	19113	19123	32463	32463					0.048798816372254805
LISGVLSYKAL	11	Unmodified	_LISGVLSYKAL_					0	0	0		nc|ENSG00000070748|P28329-3|CHAT;nc|ENSG00000070748|P28329-2|CHAT;ENSG00000070748|ENST00000337653|CHAT	nc|ENSG00000070748|P28329-3|CHAT	nc|ENSG00000070748|P28329-3|CHAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3538818359375	2	582.355357	1162.69616	0.88325	0.00051437	-4.1095	-0.0023932	-3.2263	-0.0018788	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.68532	1	11305	11305		33.922	1.9668	1	125340000			28549	1250	19114	19124	32464	32464					0.12132017751082458
LISIPYPL	8	Unmodified	_LISIPYPL_					0	0	0			REV__ENST00000572703.2_1_19:52207583-52208441:+|nuORF	REV__ENST00000572703.2_1_19:52207583-52208441:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.2779541015625	2	458.281129	914.547705	-2.3389	-0.0010719	-3.5194	-0.0016129	-5.8583	-0.0026848	458.2794797698485	42.135	0.71257	42.549	42.274	42.987	0.4139					41	17	3	0	0	0	0.73619	1	3737	3737		65.897	7.1155	1	1414500	+		28550	28951	19115	19125	32465	32465					0.08701331568033766
LISIPYPL	8	Unmodified	_LISIPYPL_					0	0	0			REV__ENST00000572703.2_1_19:52207583-52208441:+|nuORF	REV__ENST00000572703.2_1_19:52207583-52208441:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	458.281129	914.547705	-2.3389	-0.0010719	-3.5194	-0.0016129	-5.8583	-0.0026848	458.2794797698485	42.135	0.71257	42.549	42.274	42.987	0.4139	-0.07566	0.00022562	NaN	65.897	41	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1414500	+		28551	28951	19115	19125							0.08701331568033766
LISKFTTE	8	Unmodified	_LISKFTTE_					0	0	0		L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7609558105469	2	469.7633	937.512048	-1.0651	-0.00050035	-2.9191	-0.0013713	-3.9842	-0.0018716	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.80706	1	1963	1963		19.36	0	1	219920			28552	14588	19116	19126	32466	32466					0.04079249320375311
LISKMGNIV	9	Unmodified	_LISKMGNIV_					0	0	0		ENST00000457952.5_1_2:70417551-70417746:-|nuORF	ENST00000457952.5_1_2:70417551-70417746:-|nuORF	ENST00000457952.5_1_2:70417551-70417746:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79046630859375	2	487.788795	973.563038	0.54993	0.00026825	3.015	0.0014707	3.565	0.001739	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.7932	1	8403	8403		25.45	0.94616	1	633420			28553	11986	19117	19127	32467	32467					0.07519875093601058
LISKRLKSRH	10	Unmodified	_LISKRLKSRH_					0	0	0		ENSG00000148334|ENST00000338961|PTGES2	ENSG00000148334|ENST00000338961|PTGES2	ENSG00000148334|ENST00000338961|PTGES2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2675476074219	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.225	1	41.184	40.684	41.684	-0.04081								0	0	0	0.45132	1	3085	3085		27.047	7.0168	1				28554	4949	19118	19128	32468	32468					0.16895557953557727
LISKSQSLR	9	Unmodified	_LISKSQSLR_					0	0	0		nc|ENSG00000105122|Q86YV0-2|RASAL3;ENSG00000105122|ENST00000343625|RASAL3	nc|ENSG00000105122|Q86YV0-2|RASAL3	nc|ENSG00000105122|Q86YV0-2|RASAL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3132934570312	2	516.314023	1030.61349	-1.5618	-0.0008064	1.1232	0.00057995	-0.4386	-0.00022645	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.77244	1	10605	10605		32.812	2.3088	1	66055000			28555	2185	19119	19129	32469	32469					0.09941120742928433
LISLKALLQPL	11	Unmodified	_LISLKALLQPL_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.57470703125	3	403.604075	1207.7904	0.93539	0.00037753	3.6462	0.0014716	4.5816	0.0018492	403.60536513323143	80.783	0.20789	81.204	81.06	81.268	0.42149					7	4	2	0	0	0	0.18066	1	9284	9284		6.001	0	1	50226	+		28556	18894	19120	19130	32470	32470					0.1948115657321523
LISLLTAPV	9	Unmodified	_LISLLTAPV_					0	0	0		ENSG00000144712|ENST00000456430|CAND2;nc|ENSG00000144712|O75155-2|CAND2	ENSG00000144712|ENST00000456430|CAND2	ENSG00000144712|ENST00000456430|CAND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.7996826171875	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	1	3442	3442		18.324	0	1	1294000			28557	4727	19121	19131	32471	32471					0.11905003113804469
LISLLTAPV	9	Unmodified	_LISLLTAPV_					0	0	0		ENSG00000144712|ENST00000456430|CAND2;nc|ENSG00000144712|O75155-2|CAND2	ENSG00000144712|ENST00000456430|CAND2	ENSG00000144712|ENST00000456430|CAND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.7997741699219	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3374	3374		19.36	2.8868	1	1516700			28558	4727	19121	19131	32472	32472					0.11905003113804469
LISLLTAPV	9	Unmodified	_LISLLTAPV_					0	0	0		ENSG00000144712|ENST00000456430|CAND2;nc|ENSG00000144712|O75155-2|CAND2	ENSG00000144712|ENST00000456430|CAND2	ENSG00000144712|ENST00000456430|CAND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.7994079589844	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.7932	1	3700	3700		25.45	6.0902	1	251610			28559	4727	19121	19131	32473	32473					0.11905003113804469
LISLPLVPGF	10	Unmodified	_LISLPLVPGF_					0	0	0		nc|ENSG00000100320|O43251-4|RBFOX2;nc|ENSG00000100320|O43251-10|RBFOX2;nc|ENSG00000100320|O43251-2|RBFOX2;nc|ENSG00000100320|O43251|RBFOX2;nc|ENSG00000100320|O43251-6|RBFOX2;nc|ENSG00000100320|O43251-8|RBFOX2	nc|ENSG00000100320|O43251-4|RBFOX2	nc|ENSG00000100320|O43251-4|RBFOX2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3330078125	2	528.328611	1054.64267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.055	1	65.093	64.593	65.593	0.037849								0	0	0	0.45132	1	5762	5762		29.15	2.4566	1				28560	14813	19122	19132	32474	32474					0.11753265039237704
LISNLGKVM	9	Unmodified	_LISNLGKVM_					0	0	0		nc|ENSG00000172534|P51610-2|HCFC1;ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7912292480469	2	487.788795	973.563038	-0.085708	-4.1808E-05	3.6076	0.0017597	3.5219	0.0017179	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.78536	1	7979	7979		29.15	0	1	514950			28561	6775	19123	19133	32475	32475					0.0751987509358969
LISPIIIIGI	10	Unmodified	_LISPIIIIGI_					0	0	0		ENST00000316985.7_1_8:38175222-38175387:-|nuORF	ENST00000316985.7_1_8:38175222-38175387:-|nuORF	ENST00000316985.7_1_8:38175222-38175387:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3602905273438	2	526.359911	1050.70527	-0.46682	-0.00024572	2.8843	0.0015182	2.4174	0.0012724	526.3612792747932	37.192	2.9497	37.138	36.203	39.152	-0.053555					173	66	5	0	0	0	0.86201	1	2604	2604		24.203	0	1	2681300			28562	9988	19124	19134	32476	32476					0.18194411107424457
LISPRRTT	8	Unmodified	_LISPRRTT_					0	0	0			REV__ENST00000470181.1_1_9:130699930-130700023:-|nuORF	REV__ENST00000470181.1_1_9:130699930-130700023:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.2581481933594	2	472.287808	942.561064	-0.22676	-0.0001071	0.3112	0.00014698	0.084438	3.9879E-05	472.2878814676842	15.294	0.65398	15.211	14.925	15.579	-0.083364					49	29	2	0	0	0	0.4196	1	58	58		37.159	19.794	1	56882	+		28563	27205	19125	19135	32477	32477					0.08748582399982752
LISPRRTT	8	Unmodified	_LISPRRTT_					0	0	0			REV__ENST00000470181.1_1_9:130699930-130700023:-|nuORF	REV__ENST00000470181.1_1_9:130699930-130700023:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2875061035156	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.86288	1	9936	9936		26.796	1.3459	1	40161000	+		28564	27205	19125	19135	32478	32478					0.08748582399982752
LISQNRITG	9	Unmodified	_LISQNRITG_					0	0	0		MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|225|3|anti-sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|225|3|anti-sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|225|3|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2900390625	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.78058	1	9180	9180		30.504	1.3336	1	9565500			28565	14712	19126	19136	32479	32479					0.06628261191804086
LISQVKDL	8	Unmodified	_LISQVKDL_					0	0	0		nc|ENSG00000100325|Q9H1I8-2|ASCC2;ENST00000458594.5_1_22:30197094-30223519:-|nuORF;nc|ENSG00000100325|Q9H1I8-3|ASCC2;ENSG00000100325|ENST00000307790|ASCC2;ENST00000487486.5_1_22:30188501-30200764:-|nuORF	nc|ENSG00000100325|Q9H1I8-2|ASCC2	nc|ENSG00000100325|Q9H1I8-2|ASCC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.2775573730469	2	458.279118	914.543683	-1.8071	-0.00082815	0.41953	0.00019226	-1.3876	-0.00063589	458.27923297817614	42.002	0.67372	42.7	42.418	43.091	0.69754					38	16	3	0	0	0	0.79403	1	3736	3736		63.306	0	1	1196800			28566	1824	19127	19137	32480	32480					0.08299242074338053
LISRKFKC	8	Unmodified	_LISRKFKC_					0	0	0		ENST00000531361.1_1_1:26149550-26156105:+|nuORF	ENST00000531361.1_1_1:26149550-26156105:+|nuORF	ENST00000531361.1_1_1:26149550-26156105:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.7953796386719	2	497.796955	993.579357	-0.66885	-0.00033295	-1.4191	-0.00070643	-2.088	-0.0010394	497.7958642477004	48.816	1.5297	48.791	47.88	49.41	-0.025112					123	35	4	0	0	0	0.87064	2	4089	4089;4148		31.955	5.1588	1	502690			28567	13357	19128	19138	32481;32482	32481					0.08231001050342002
LISRKNSSHL	10	Unmodified	_LISRKNSSHL_					0	0	0			REV__nc|ENSG00000155592|Q63HK3-2|ZKSCAN2	REV__nc|ENSG00000155592|Q63HK3-2|ZKSCAN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	577.8401489257812	2	577.835654	1153.65676	-1.6803	-0.00097093	4.0239	0.0023251	2.3436	0.0013542	577.8382767024984	60.354	1.325	60.743	59.931	61.256	0.38945					53	35	2	0	0	0	0.82886	1	6405	6405		37.812	0.65241	1	507420	+		28568	20434	19129	19139	32483	32483					0.08607310520255851
LISTHKFW	8	Unmodified	_LISTHKFW_					0	0	0		ENST00000371703.7_1_10:92631554-92631593:+|nuORF	ENST00000371703.7_1_10:92631554-92631593:+|nuORF	ENST00000371703.7_1_10:92631554-92631593:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3135375976562	2	516.287277	1030.56	-0.26133	-0.00013492	2.0588	0.0010629	1.7975	0.00092802	516.2882957149611	98.806	0.25517	99.028	98.833	99.088	0.22262					7	5	2	0	0	0	0.4196	1	10240	10240		40.573	0	1	137460			28569	10672	19130	19140	32484	32484					0.04594368031075646
LISTRGTRFL	10	Unmodified	_LISTRGTRFL_					0	0	0		ENSG00000164309|ENST00000446378|CMYA5;ENST00000506603.5_1_5:79058805-79095436:+|nuORF	ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3538818359375	2	582.348397	1162.68224	3.1798	0.0018517	4.4512	0.0025921	7.631	0.0044439	582.3507292390461	107.89	0.36398	107.86	107.55	107.92	-0.031487					21	8	3	0	0	0	0.85939	1	11934	11934		23.042	1.0826	1	5526500			28570	5953	19131	19141	32485	32485					0.10740785042662537
LISVELII	8	Unmodified	_LISVELII_					0	0	0			REV__ENST00000553504.5_1_14:31074892-31074940:+|nuORF	REV__ENST00000553504.5_1_14:31074892-31074940:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2745056152344	2	450.294236	898.57392	0.49003	0.00022066	1.6007	0.00072078	2.0907	0.00094144	450.2949023453949	92.769	0.45592	93.216	92.862	93.318	0.44661					18	10	2	0	0	0	0.4196	1	11028	11028		4.3163	0	1	84694	+		28571	28645	19132	19142	32486	32486					0.12057600739535701
LISYGHIGVT	10	Unmodified	_LISYGHIGVT_					0	0	0		ENSG00000239590|ENST00000340750|OR1J4	ENSG00000239590|ENST00000340750|OR1J4	ENSG00000239590|ENST00000340750|OR1J4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.29296875	2	530.295299	1058.57605	-0.066725	-3.5384E-05	-3.5889	-0.0019032	-3.6556	-0.0019386	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.74274	1	9163	9163		42.396	5.237	1	2084800			28572	8771	19133	19143	32487	32487					0.049100294773325004
LISYSVTG	8	Unmodified	_LISYSVTG_					0	0	0			REV__nc|ENSG00000118946|O14917-2|PCDH17	REV__nc|ENSG00000118946|O14917-2|PCDH17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.22747802734375	2	420.229094	838.443634	-0.18765	-7.8855E-05	-2.6467	-0.0011122	-2.8344	-0.0011911	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.91005	1	7669	7669		42.474	6.8562	1	743780	+		28573	18332	19134	19144	32488	32488					0.017950047405292935
LITAVIEVV	9	Unmodified	_LITAVIEVV_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80548095703125	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.357	1	42.357	41.857	42.857	0								0	0	0	0.28386	1	2930	2930		37.159	11.709	1		+		28574	23882	19135	19145	32489	32489					0.11580985768227947
LITAVIEVV	9	Unmodified	_LITAVIEVV_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8053894042969	2	478.804968	955.595384	0.0084327	4.0376E-06	1.0128	0.00048494	1.0212	0.00048897	478.8053762340742	40.542	0.9838	40.495	39.813	40.797	-0.04789					47	34	2	0	0	0	0.7932	1	2496	2496		25.45	6.0902	1	322510	+		28575	23882	19135	19145	32490	32490					0.11580985768227947
LITCKRRR	8	Unmodified	_LITCKRRR_					0	0	0			REV__ENST00000471396.1_1_3:160156946-160167482:-|nuORF	REV__ENST00000471396.1_1_3:160156946-160167482:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.324202	1044.63385	-0.041317	-2.1622E-05	3.4233	0.0017915	3.382	0.0017699	523.3266117393723	89.08	0.34117	89.148	88.914	89.256	0.068161					9	7	2	0	0	0	0.4196	1	9058	9058		19.36	0	1	79108	+		28576	27228	19136	19146	32491	32491					0.11332012921775458
LITCKRRR	8	Unmodified	_LITCKRRR_					0	0	0			REV__ENST00000471396.1_1_3:160156946-160167482:-|nuORF	REV__ENST00000471396.1_1_3:160156946-160167482:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3036499023438	2	523.324202	1044.63385	-0.17408	-9.11E-05	-1.819	-0.00095195	-1.9931	-0.0010431	523.3230954896288	89.284	0.25742	89.491	89.256	89.513	0.20731					8	5	2	0	0	0	0.4196	1	8884	8884		31.955	11.958	1	66885	+		28577	27228	19136	19146	32492	32492					0.11332012921775458
LITELVEPL	9	Unmodified	_LITELVEPL_					0	0	0		L1ME3C_dup557|chr3:20167491-20168211:+|1.3149364350008226|0.0676750208927684|4.28|63.0|4|1|sense	L1ME3C_dup557|chr3:20167491-20168211:+|1.3149364350008226|0.0676750208927684|4.28|63.0|4|1|sense	L1ME3C_dup557|chr3:20167491-20168211:+|1.3149364350008226|0.0676750208927684|4.28|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8082885742188	2	513.807708	1025.60086	0.36714	0.00018864	2.3101	0.001187	2.6773	0.0013756	513.8088609518841	50.93	1.0953	50.98	50.541	51.637	0.049896					79	32	3	0	0	0	0.7932	1	3977	3977		24.203	1.1603	1	394250			28578	14601	19137	19147	32493	32493					0.08908664560067336
LITFLFGMVVL	11	Unmodified	_LITFLFGMVVL_					0	0	0		ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2490234375	3	418.250644	1251.7301	1.3061	0.00054626	-3.9622	-0.0016572	-2.6561	-0.0011109	418.2490092649211	34.436	1.7264	34.741	34.324	36.05	0.30494					81	43	3	0	0	0	0.70584	1	2579	2579		30.569	8.7884	1	411940			28579	7479	19138	19148	32494	32494					0.11430722918498759
LITGMVLHG	9	Unmodified	_LITGMVLHG_					0	0	0			REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.768798828125	2	470.767863	939.521173	-0.63239	-0.00029771	3.0027	0.0014136	2.3703	0.0011159	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.67235	1	4717	4717		42.474	3.6683	1	1468500	+		28580	29051	19139	19149	32495	32495					0.048993194050581224
LITGMVLHG	9	Unmodified	_LITGMVLHG_					0	0	0			REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7694396972656	2	470.767863	939.521173	-0.85112	-0.00040068	3.3507	0.0015774	2.4995	0.0011767	470.7693717184576	51.01	1.4748	51.018	50.607	52.082	0.0077438					99	42	3	0	0	0	0.76402	1	4427	4427		35.201	1.6851	1	770790	+		28581	29051	19139	19149	32496	32496					0.048993194050581224
LITGMVLHG	9	Unmodified	_LITGMVLHG_					0	0	0			REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.76971435546875	2	470.767863	939.521173	-1.0178	-0.00047915	3.0761	0.0014481	2.0583	0.00096897	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.3636	1	4369	4369		60.294	10.852	1	1648400	+		28582	29051	19139	19149	32497	32497					0.048993194050581224
LITGMVLHG	9	Unmodified	_LITGMVLHG_					0	0	0			REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7692565917969	2	470.767863	939.521173	-0.23699	-0.00011157	2.7387	0.0012893	2.5017	0.0011777	470.7690852138792	80.179	2.0778	80.595	78.892	80.97	0.41621					101	48	4	0	0	0	0.67235	1	9168	9168		42.474	3.2216	1	1333300	+		28583	29051	19139	19149	32498	32498					0.048993194050581224
LITHVLPFKK	10	Unmodified	_LITHVLPFKK_					0	0	0		ENSG00000196344|ENST00000437033|ADH7;nc|ENSG00000196344|P40394|ADH7;nc|ENSG00000196344|P40394-2|ADH7	ENSG00000196344|ENST00000437033|ADH7	ENSG00000196344|ENST00000437033|ADH7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.3806762695312	2	598.381709	1194.74886	-2.4045	-0.0014388	1.9021	0.0011382	-0.50239	-0.00030062	598.3827122218626	40.848	1.3552	40.855	40.235	41.59	0.0065727					86	35	3	0	0	0	0.85466	1	2917	2917		20.947	4.4738	1	583190			28584	8038	19140	19150	32499	32499					0.15928020604565063
LITIIGHGFS	10	Unmodified	_LITIIGHGFS_					0	0	0		ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.78173828125	2	529.305667	1056.59678	0.60662	0.00032109	1.1589	0.00061341	1.7655	0.0009345	529.3060863569466	49.675	0.408	50.134	49.952	50.36	0.45983					13	9	2	0	0	0	0.37624	1	4847	4847		29.15	0	1	249080			28585	8508	19141	19151	32500	32500					0.0707461985698501
LITIPNPVIVE	11	Unmodified	_LITIPNPVIVE_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2471008300781	3	403.248068	1206.72238	-0.96192	-0.00038789	-1.9031	-0.00076743	-2.865	-0.0011553	403.2472281244655	104.88	3.5231	104.88	103.72	107.24	0					230	83	5	0	0	0	0.67778	1	10925	10925		37.6	4.8494	1	5402700	+		28586	20437;29946	19142	19152	32501	32501					0.12728286922538246
LITIPNPVIVE	11	Unmodified	_LITIPNPVIVE_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.366943359375	2	604.368464	1206.72238	-0.48563	-0.0002935	-2.8288	-0.0017096	-3.3144	-0.0020031	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.60687	1	11664	11664		43.651	5.8393	1	63350000	+		28587	20437;29946	19142	19152	32502	32502					0.12728286922538246
LITIPNPVIVE	11	Unmodified	_LITIPNPVIVE_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.246826171875	3	403.248068	1206.72238	-1.7912	-0.0007223	-1.1732	-0.00047308	-2.9644	-0.0011954	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.74763	1	11161	11161		25.892	4.1113	1	20673000	+		28588	20437;29946	19142	19152	32503	32503					0.12728286922538246
LITIRVHKSQT	11	Unmodified	_LITIRVHKSQT_					0	0	0			REV__ENSG00000186130|ENST00000373659|ZBTB6	REV__ENSG00000186130|ENST00000373659|ZBTB6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3924560546875	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.72106	1	12457	12457		28.081	3.8787	1	2297700	+		28589	22825	19143	19153	32504	32504					0.13652414651210165
LITISGHKNRL	11	Unmodified	_LITISGHKNRL_					0	0	0		nc|ENSG00000123572|Q7Z2Y5-2|NRK;ENSG00000123572|ENST00000243300|NRK	nc|ENSG00000123572|Q7Z2Y5-2|NRK	nc|ENSG00000123572|Q7Z2Y5-2|NRK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.9223937988281	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.76322	1	11536	11536		22.562	0	1	19495000			28590	3281	19144	19154	32505	32505					0.13056145479754377
LITISGHKNRL	11	Unmodified	_LITISGHKNRL_					0	0	0		nc|ENSG00000123572|Q7Z2Y5-2|NRK;ENSG00000123572|ENST00000243300|NRK	nc|ENSG00000123572|Q7Z2Y5-2|NRK	nc|ENSG00000123572|Q7Z2Y5-2|NRK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.379638671875	2	626.380229	1250.7459	0.93883	0.00058807	-1.8374	-0.0011509	-0.89857	-0.00056285	626.3789780788948	105.75	2.6569	105.79	104.95	107.61	0.038322					312	62	6	0	0	0	0.66929	1	11811	11811		36.447	3.6343	1	47947000			28591	3281	19144	19154	32506	32506					0.13056145479754377
LITIVPYG	8	Unmodified	_LITIVPYG_					0	0	0			REV__ENSG00000072657|ENST00000261180|TRHDE	REV__ENSG00000072657|ENST00000261180|TRHDE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26324462890625	2	438.265479	874.516405	-1.2142	-0.00053214	-3.9242	-0.0017198	-5.1384	-0.002252	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.86288	1	3422	3422		26.796	5.0938	1	4828000	+		28592	16652	19145	19155	32507	32507					0.07412758533951092
LITKSVQSLGL	11	Unmodified	_LITKSVQSLGL_					0	0	0			REV__ENST00000549770.1_1_14:33684397-34029452:+|nuORF	REV__ENST00000549770.1_1_14:33684397-34029452:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.8591918945312	2	579.858264	1157.70197	-1.5498	-0.00089864	1.677	0.00097243	0.12726	7.3791E-05	579.8592324197559	74.227	0.53839	74.618	74.29	74.829	0.39111					22	12	2	0	0	0	0.57736	1	8365	8365		46.457	8.9486	1	425030	+		28593	28587	19146	19156	32508	32508					0.12943116262749754
LITKSVQSLGL	11	Unmodified	_LITKSVQSLGL_					0	0	0			REV__ENST00000549770.1_1_14:33684397-34029452:+|nuORF	REV__ENST00000549770.1_1_14:33684397-34029452:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	579.858264	1157.70197	-1.5498	-0.00089864	1.677	0.00097243	0.12726	7.3791E-05	579.8592324197559	74.227	0.53839	74.618	74.29	74.829	0.39111	0.039637	9.9196E-05	NaN	46.457	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	425030	+		28594	28587	19146	19156							0.12943116262749754
LITLFTKSQI	10	Unmodified	_LITLFTKSQI_					0	0	0		ENST00000609104.5_1_10:11551634-11569506:-|nuORF	ENST00000609104.5_1_10:11551634-11569506:-|nuORF	ENST00000609104.5_1_10:11551634-11569506:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.35400390625	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.86471	1	12914	12914		30.318	4.7437	1	3937500			28595	14482	19147	19157	32509	32509					0.12132017751082458
LITLGLPQVIN	11	Unmodified	_LITLGLPQVIN_					0	0	0			REV__ENSG00000162337|ENST00000294304|LRP5;REV__ENST00000529993.5_1_11:68171724-68216535:+|nuORF	REV__ENSG00000162337|ENST00000294304|LRP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8668823242188	2	590.868631	1179.72271	-0.64254	-0.00037966	-3.2896	-0.0019437	-3.9321	-0.0023234	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.65746	1	11413	11413		37.812	11.119	1	52912000	+		28596	20804;28276	19148	19158	32510	32510					0.14003706642415636
LITLIFRR	8	Unmodified	_LITLIFRR_					0	0	0			REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	REV__nc|ENSG00000145808|Q8TE59|ADAMTS19	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3138427734375	2	516.339844	1030.66514	2.8026	0.0014471	-0.89415	-0.00046168	1.9085	0.00098543	516.3396598860132	99.682	0.25547	99.628	99.524	99.779	-0.053741					9	5	2	0	0	0	0.4196	1	10803	10803		19.36	5.5846	1	84139	+		28597	19969	19149	19159	32511	32511					0.1510290922749391
LITLSKKKAGH	11	Unmodified	_LITLSKKKAGH_					0	0	0		nc|ENSG00000253117|Q02509-3|OC90	nc|ENSG00000253117|Q02509-3|OC90	nc|ENSG00000253117|Q02509-3|OC90	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3799438476562	2	598.379697	1194.74484	-0.19423	-0.00011622	3.3027	0.0019763	3.1085	0.00186	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.70737	1	2909	2909		30.318	5.7985	1	825320			28598	15289	19150	19160	32512	32512					0.15525931110823876
LITLSKKKAGH	11	Unmodified	_LITLSKKKAGH_					0	0	0		nc|ENSG00000253117|Q02509-3|OC90	nc|ENSG00000253117|Q02509-3|OC90	nc|ENSG00000253117|Q02509-3|OC90	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.3802490234375	2	598.379697	1194.74484	-0.74115	-0.00044349	3.5243	0.0021089	2.7832	0.0016654	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.72918	1	2984	2984		26.693	2.4902	1	772980			28599	15289	19150	19160	32513	32513					0.15525931110823876
LITLSKKKAGH	11	Unmodified	_LITLSKKKAGH_					0	0	0		nc|ENSG00000253117|Q02509-3|OC90	nc|ENSG00000253117|Q02509-3|OC90	nc|ENSG00000253117|Q02509-3|OC90	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3805541992188	2	598.379697	1194.74484	-1.3328	-0.00079753	3.7818	0.002263	2.449	0.0014655	598.3818526094551	40.308	0.87541	40.701	40.092	40.968	0.39209					91	22	5	0	0	0	0.5603	3	3429	3382;3404;3429		47.657	12.547	1	10750000			28600	15289	19150	19160	32514;32515;32516	32516					0.15525931110823876
LITLSKKKAGH	11	Unmodified	_LITLSKKKAGH_					0	0	0		nc|ENSG00000253117|Q02509-3|OC90	nc|ENSG00000253117|Q02509-3|OC90	nc|ENSG00000253117|Q02509-3|OC90	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3814697265625	2	598.379697	1194.74484	-1.5819	-0.00094655	3.9051	0.0023368	2.3233	0.0013902	598.381910376305	40.152	1.105	40.741	40.044	41.149	0.58915					94	27	5	0	0	0	0.67778	1	3391	3391		35.152	2.4015	1	9102300			28601	15289	19150	19160	32517	32517					0.15525931110823876
LITMFIGLIL	10	Unmodified	_LITMFIGLIL_					0	0	0			REV__ENST00000527146.1_2_11:308871-309162:+|nuORF	REV__ENST00000527146.1_2_11:308871-309162:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3294677734375	2	567.353771	1132.69299	0.483	0.00027403	-2.7058	-0.0015352	-2.2228	-0.0012611	567.3511977607387	92.874	0.24069	93.099	92.915	93.156	0.22547					7	5	2	0	0	0	0.37624	1	9401	9401		23.042	6.5693	1	88299	+		28602	22744	19151	19161	32518	32518					0.13195051372736089
LITMFIGLIL	10	Unmodified	_LITMFIGLIL_					0	0	0			REV__ENST00000527146.1_2_11:308871-309162:+|nuORF	REV__ENST00000527146.1_2_11:308871-309162:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.32958984375	2	567.353771	1132.69299	-1.3957	-0.00079188	-1.8035	-0.0010232	-3.1992	-0.0018151	567.3539016095187	92.88	0.28691	93.073	92.82	93.107	0.19239					11	6	2	0	0	0	0.37624	1	9346	9346		23.042	5.6775	1	60069	+		28603	22744	19151	19161	32519	32519					0.13195051372736089
LITPGVRD	8	Unmodified	_LITPGVRD_					0	0	0			REV__ENSG00000154803|ENST00000285071|FLCN	REV__ENSG00000154803|ENST00000285071|FLCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.7545166015625	2	435.75581	869.497067	0.32717	0.00014257	-3.8531	-0.001679	-3.5259	-0.0015364	435.75338117519266	81.61	2.2798	82.11	81.744	84.024	0.49966					68	55	2	0	0	0	0.89043	1	9452	9452		35.618	0	1	343320	+		28604	20402	19152	19162	32520	32520					0.0570980224304094
LITPLVSLG	9	Unmodified	_LITPLVSLG_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;ENST00000503696.1_1_4:39874587-39874749:-|nuORF	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7889099121094	2	456.791861	911.569169	-1.3117	-0.00059915	2.7647	0.0012629	1.4531	0.00066375	456.79301301178594	40.135	1.4029	40.092	39.45	40.853	-0.043697					111	34	4	0	0	0	0.74721	1	2994	2994		37.159	5.2042	1	1093900			28605	3199	19153	19163	32521	32521					0.10984716596749422
LITPLVSLG	9	Unmodified	_LITPLVSLG_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;ENST00000503696.1_1_4:39874587-39874749:-|nuORF	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7930603027344	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.76996	1	2379	2379		33.516	1.5607	1	1834900			28606	3199	19153	19163	32522	32522					0.10984716596749422
LITPSVVAI	9	Unmodified	_LITPSVVAI_					0	0	0		nc|ENSG00000092931|O43934-2|MFSD11;ENSG00000092931|ENST00000685175|MFSD11	nc|ENSG00000092931|O43934-2|MFSD11	nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7929382324219	2	456.791861	911.569169	-1.09	-0.00049788	3.7703	0.0017222	2.6803	0.0012244	456.7935086768371	36.547	3.494	36.558	33.881	37.375	0.011173					215	79	5	0	0	0	0.62081	1	2304	2304		45.952	3.4775	1	4477500			28607	1707	19154	19164	32523	32523					0.10984716596760791
LITPSVVAI	9	Unmodified	_LITPSVVAI_					0	0	0		nc|ENSG00000092931|O43934-2|MFSD11;ENSG00000092931|ENST00000685175|MFSD11	nc|ENSG00000092931|O43934-2|MFSD11	nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79302978515625	2	456.791861	911.569169	-1.4265	-0.00065161	4.1949	0.0019162	2.7684	0.0012646	456.7936601394385	37.79	2.3589	37.801	37.33	39.689	0.011173					114	54	4	0	0	0	0.7932	1	2504	2504		23.042	3.6825	1	2031500			28608	1707	19154	19164	32524	32524					0.10984716596760791
LITPSVVAI	9	Unmodified	_LITPSVVAI_					0	0	0		nc|ENSG00000092931|O43934-2|MFSD11;ENSG00000092931|ENST00000685175|MFSD11	nc|ENSG00000092931|O43934-2|MFSD11	nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7931823730469	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.76996	1	1984	1984		33.516	0	1	3484100			28609	1707	19154	19164	32525	32525					0.10984716596760791
LITPSVVAI	9	Unmodified	_LITPSVVAI_					0	0	0		nc|ENSG00000092931|O43934-2|MFSD11;ENSG00000092931|ENST00000685175|MFSD11	nc|ENSG00000092931|O43934-2|MFSD11	nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7925720214844	2	456.791861	911.569169	-1.2516	-0.0005717	4.1535	0.0018973	2.9019	0.0013256	456.7936304493402	37.846	1.122	37.863	37.475	38.597	0.016563					101	34	4	0	0	0	0.7932	1	2275	2275		26.796	7.4361	1	1324300			28610	1707	19154	19164	32526	32526					0.10984716596760791
LITPSVVAI	9	Unmodified	_LITPSVVAI_					0	0	0		nc|ENSG00000092931|O43934-2|MFSD11;ENSG00000092931|ENST00000685175|MFSD11	nc|ENSG00000092931|O43934-2|MFSD11	nc|ENSG00000092931|O43934-2|MFSD11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7930908203125	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.7932	1	1975	1975		25.45	6.0902	1	3452400			28611	1707	19154	19164	32527	32527					0.10984716596760791
LITRQAGGRA	10	Unmodified	_LITRQAGGRA_					0	0	0		ENSG00000128011|ENST00000248668|LRFN1	ENSG00000128011|ENST00000248668|LRFN1	ENSG00000128011|ENST00000248668|LRFN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2720336914062	2	521.809439	1041.60433	0.75162	0.0003922	1.3757	0.00071786	2.1273	0.0011101	522.3117030021521	55.418	0.37691	55.819	55.656	56.033	0.40101					13	8	2	0	0	0	0.37624	1	5659	5659		49.442	17.487	1	112770			28612	3525	19155	19165	32528	32528					0.08518772177285427
LITRQAGGRA	10	Unmodified	_LITRQAGGRA_					0	0	0		ENSG00000128011|ENST00000248668|LRFN1	ENSG00000128011|ENST00000248668|LRFN1	ENSG00000128011|ENST00000248668|LRFN1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	521.809439	1041.60433	0.24146	0.000126	2.2657	0.0011823	2.5071	0.0013083	521.8103587808823	55.272	0.41678	55.841	55.658	56.074	0.56836	0.010589	0.00024942	NaN	49.442	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94194			28613	3525	19155	19165							0.08518772177285427
LITRRVHH	8	Unmodified	_LITRRVHH_					0	0	0		ENST00000554270.5_1_14:88936247-89016761:-|nuORF;ENSG00000070778|ENST00000556564|PTPN21	ENST00000554270.5_1_14:88936247-89016761:-|nuORF	ENST00000554270.5_1_14:88936247-89016761:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.31494140625	2	516.314692	1030.61483	-1.5619	-0.00080641	0.27971	0.00014442	-1.2821	-0.00066199	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.82419	1	12920	12920		13.775	0	1	4038100			28614	1251	19156	19166	32529	32529					0.10074799622361752
LITSLPISI	9	Unmodified	_LITSLPISI_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8052062988281	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.711	1	42.681	42.181	43.181	-0.029461								0	0	0	0.28772	1	3208	3208		35.618	5.1146	1				28615	2161;12487	19157	19167	32530	32530					0.11580985768239316
LITSLPISI	9	Unmodified	_LITSLPISI_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.30670166015625	2	478.804968	955.595384	-2.1118	-0.0010111	4.0445	0.0019365	1.9327	0.00092538	478.8067215450766	42.623	1.2578	42.623	42.157	43.414	0.00016785					54	29	3	0	0	0	0.7932	1	3177	3177		21.96	2.5999	1	179530			28616	2161;12487	19157	19167	32531	32531					0.11580985768239316
LITSLPISI	9	Unmodified	_LITSLPISI_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.80743408203125	2	478.804968	955.595384	0.22693	0.00010865	2.6093	0.0012493	2.8362	0.001358	478.8061448766097	39.22	1.8064	39.308	38.205	40.011	0.088375					88	52	2	0	0	0	0.78536	1	2433	2433		29.15	1.2673	1	295310			28617	2161;12487	19157	19167	32532	32532					0.11580985768239316
LITSLPISI	9	Unmodified	_LITSLPISI_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.806396484375	2	478.804968	955.595384	0.48091	0.00023026	2.3261	0.0011138	2.807	0.001344	478.8059956307694	38.14	1.7088	38.481	37.399	39.107	0.34187					102	42	3	0	0	0	0.76764	1	3125	3125		34.173	2.2177	1	956570			28618	2161;12487	19157	19167	32533	32533					0.11580985768239316
LITSLPISI	9	Unmodified	_LITSLPISI_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L;ENST00000482433.1_1_19:2216201-2220604:+|nuORF	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	478.804968	955.595384	-0.84078	-0.00040257	3.7524	0.0017966	2.9116	0.0013941	478.8066149662188	38.012	1.7579	38.534	37.487	39.245	0.52235	0.026197	0.00080253	NaN	34.173	103	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1026400			28619	2161;12487	19157	19167							0.11580985768239316
LITSLRLTVFF	11	Unmodified	_LITSLRLTVFF_					0	0	0			REV__ENST00000494445.1_1_3:186506966-186507038:+|nuORF	REV__ENST00000494445.1_1_3:186506966-186507038:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2678527832031	3	437.267463	1308.78056	-1.0896	-0.00047642	1.9138	0.00083683	0.82421	0.0003604	437.2682076309449	48.376	1.4718	48.845	48.119	49.591	0.46941					123	36	4	0	0	0	0.74771	1	4721	4721		22.562	0.78116	1	3096400	+		28620	27719	19158	19168	32534	32534					0.13851968567837503
LITSVAIIVM	10	Oxidation (M)	_LITSVAIIVM(Oxidation (M))_		LITSVAIIVM(1)		LITSVAIIVM(41)	0	0	1			REV__ENST00000514325.1_1_4:83277653-83277776:-|nuORF	REV__ENST00000514325.1_1_4:83277653-83277776:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3265991210938	2	538.325211	1074.63587	1.246	0.00067076	1.8365	0.00098862	3.0825	0.0016594	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.777	1	11110	11110		40.573	10.255	1	76567000	+		28621	28010	19159	19169	32535	32535		416			0.10153584096360646
LITSVAIIVM	10	Oxidation (M)	_LITSVAIIVM(Oxidation (M))_		LITSVAIIVM(1)		LITSVAIIVM(48)	0	0	1			REV__ENST00000514325.1_1_4:83277653-83277776:-|nuORF	REV__ENST00000514325.1_1_4:83277653-83277776:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3272705078125	2	538.325211	1074.63587	0.84014	0.00045227	2.1852	0.0011764	3.0254	0.0016286	538.326371026974	100.85	3.8483	100.99	100.33	104.18	0.14352					341	94	6	0	0	0	0.6398	1	10765	10765		47.916	11.469	1	92159000	+		28622	28010	19159	19169	32536	32536		416			0.10153584096360646
LITSVAIIVM	10	Oxidation (M)	_LITSVAIIVM(Oxidation (M))_		LITSVAIIVM(1)		LITSVAIIVM(48)	0	0	1			REV__ENST00000514325.1_1_4:83277653-83277776:-|nuORF	REV__ENST00000514325.1_1_4:83277653-83277776:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.32666015625	2	538.325211	1074.63587	-1.4902	-0.00080219	4.4222	0.0023806	2.932	0.0015784	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.6398	2	10627	10627;10665		47.916	10.104	1	93615000	+		28623	28010	19159	19169	32537;32538	32537		416			0.10153584096360646
LITSVEKKVF	10	Unmodified	_LITSVEKKVF_					0	0	0		ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3536376953125	2	582.355357	1162.69616	-0.28407	-0.00016543	-2.8357	-0.0016514	-3.1197	-0.0018168	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.86718	4	10657	10657;10681;10705;10849		27.882	2.3082	1	61091000			28624	5960	19160	19170	32539;32540;32541;32542	32539					0.12132017751082458
LITSVEKKVF	10	Unmodified	_LITSVEKKVF_					0	0	0		ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3538208007812	2	582.355357	1162.69616	-0.84093	-0.00048972	-2.4295	-0.0014149	-3.2705	-0.0019046	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.86218	7	11097	11097;11133;11145;11157;11229;11327;11339		32.812	3.6424	1	77752000			28625	5960	19160	19170	32543;32544;32545;32546;32547;32548;32549	32543					0.12132017751082458
LITSVEKKVF	10	Unmodified	_LITSVEKKVF_					0	0	0		ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3536987304688	2	582.355357	1162.69616	0.15817	9.2113E-05	-3.4182	-0.0019906	-3.26	-0.0018985	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.77314	4	11365	11244;11280;11365;11671		40.778	15.204	1	78004000			28626	5960	19160	19170	32550;32551;32552;32553	32552					0.12132017751082458
LITSVEKKVF	10	Unmodified	_LITSVEKKVF_					0	0	0		ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3534545898438	2	582.355357	1162.69616	0.16989	9.8934E-05	-3.1776	-0.0018505	-3.0077	-0.0017515	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.85694	1	12609	12609		21.96	2.5999	1	635410			28627	5960	19160	19170	32554	32554					0.12132017751082458
LITSVEKKVF	10	Unmodified	_LITSVEKKVF_					0	0	0		ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3536376953125	2	582.355357	1162.69616	0.72244	0.00042072	-3.9804	-0.002318	-3.258	-0.0018973	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.85934	11	11029	10896;10932;10956;10980;11029;11091;11115;11127;11212;11270;11332		35.618	8.2932	1	132960000			28628	5960	19160	19170	32555;32556;32557;32558;32559;32560;32561;32562;32563;32564;32565	32559					0.12132017751082458
LITSVEKKVF	10	Unmodified	_LITSVEKKVF_					0	0	0		ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3536376953125	2	582.355357	1162.69616	0.88325	0.00051437	-4.1095	-0.0023932	-3.2263	-0.0018788	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.82886	6	11245	10873;10906;11014;11038;11100;11245		37.812	11.119	1	125340000			28629	5960	19160	19170	32566;32567;32568;32569;32570;32571	32571					0.12132017751082458
LITSVEKKVF	10	Unmodified	_LITSVEKKVF_					0	0	0		ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3534545898438	2	582.355357	1162.69616	0.88316	0.00051431	-3.7361	-0.0021758	-2.853	-0.0016614	582.3530528563588	107.01	0.9049	107.1	106.6	107.5	0.091255					68	21	4	0	0	0	0.77314	1	11414	11414		40.778	12.896	1	1191700			28630	5960	19160	19170	32572	32572					0.12132017751082458
LITSVEKKVF	10	Unmodified	_LITSVEKKVF_					0	0	0		ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3533935546875	2	582.355357	1162.69616	-1.3468	-0.00078429	-1.8918	-0.0011017	-3.2386	-0.001886	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.85934	11	11098	10871;10883;10953;11002;11015;11027;11098;11110;11207;11279;11291		35.618	10.233	1	120000000			28631	5960	19160	19170	32573;32574;32575;32576;32577;32578;32579;32580;32581;32582;32583	32579					0.12132017751082458
LITSVEKKVF	10	Unmodified	_LITSVEKKVF_					0	0	0		ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3541870117188	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.74274	6	12131	12131;12143;12166;12439;12626;12894		42.396	15.703	1	3937500			28632	5960	19160	19170	32584;32585;32586;32587;32588;32589	32584					0.12132017751082458
LITSVEKKVF	10	Unmodified	_LITSVEKKVF_					0	0	0		ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3524169921875	2	582.355357	1162.69616	0.75692	0.00044079	-3.4476	-0.0020077	-2.6906	-0.0015669	582.3532376593708	103.08	2.584	103.3	103	105.58	0.22556					189	68	3	0	0	0	0.67571	2	12593	12593;12640		45.972	15.655	1	7736200			28633	5960	19160	19170	32590;32591	32590					0.12132017751082458
LITSVTPLL	9	Unmodified	_LITSVTPLL_					0	0	0		ENSG00000179626|ENST00000641569|OR6C4	ENSG00000179626|ENST00000641569|OR6C4	ENSG00000179626|ENST00000641569|OR6C4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.80340576171875	2	478.804968	955.595384	0.24724	0.00011838	1.589	0.00076084	1.8363	0.00087922	478.8055593968592	41.183	1.271	41.256	40.938	42.209	0.073414					62	33	2	0	0	0	0.7932	1	2695	2695		23.042	1.0826	1	199990			28634	7284	19161	19171	32592	32592					0.11580985768239316
LITTFFLF	8	Unmodified	_LITTFFLF_					0	0	0			REV__nc|ENSG00000197408|P20813-2|CYP2B6	REV__nc|ENSG00000197408|P20813-2|CYP2B6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.291015625	2	501.288954	1000.56336	-0.4806	-0.00024092	3.9838	0.001997	3.5032	0.0017561	501.29075662244736	99.197	1.8998	99.42	98.833	100.73	0.22262					82	44	3	0	0	0	0.87276	1	10327	10327		29.842	0	1	768070	+		28635	21400	19162	19172	32593	32593					0.06309618085083457
LITTSYTF	8	Unmodified	_LITTSYTF_					0	0	0		ENSG00000172772|ENST00000395079|OR10W1	ENSG00000172772|ENST00000395079|OR10W1	ENSG00000172772|ENST00000395079|OR10W1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.24798583984375	2	473.250026	944.485499	-0.51454	-0.00024351	-3.7055	-0.0017537	-4.2201	-0.0019972	473.24818540235697	28.981	1.8023	28.961	28.523	30.325	-0.019407					101	54	4	0	0	0	0.52826	1	1442	1442		74.517	8.6191	1	574970			28636	6793	19163	19173	32594	32594					0.01103560429044137
LITTVVLTT	9	Unmodified	_LITTVVLTT_					0	0	0			REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF	REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.80126953125	2	480.802426	959.590298	-0.92578	-0.00044512	-2.1904	-0.0010531	-3.1161	-0.0014982	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.7932	1	9739	9739		24.203	1.166	1	7439400	+		28637	20165	19164	19174	32595	32595					0.10888681905601061
LITTVVLTT	9	Unmodified	_LITTVVLTT_					0	0	0			REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF	REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.80047607421875	2	480.802426	959.590298	-0.87555	-0.00042097	-1.9296	-0.00092775	-2.8051	-0.0013487	480.80141229635706	99.415	2.4533	99.415	98.234	100.69	0					106	59	2	0	0	0	0.7932	1	9983	9983		24.203	0	1	116320	+		28638	20165	19164	19174	32596	32596					0.10888681905601061
LITVLQMYKSS	11	Unmodified	_LITVLQMYKSS_					0	0	0		ENST00000346872.7_2_17:37920768-37920894:-|nuORF	ENST00000346872.7_2_17:37920768-37920894:-|nuORF	ENST00000346872.7_2_17:37920768-37920894:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3616943359375	2	641.857406	1281.70026	1.7061	0.001095	1.7571	0.0011278	3.4631	0.0022228	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.6493	1	12830	12830		38.754	2.3069	1	27133000			28639	10311	19165	19175	32597	32597					0.07067739182502919
LITVPLEID	9	Unmodified	_LITVPLEID_					0	0	0		nc|ENSG00000032742|Q13099-3|IFT88;ENSG00000032742|ENST00000351808|IFT88;nc|ENSG00000032742|Q13099-1|IFT88	nc|ENSG00000032742|Q13099-3|IFT88	nc|ENSG00000032742|Q13099-3|IFT88	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.7998352050781	2	506.799883	1011.58521	-0.4991	-0.00025294	2.6404	0.0013382	2.1413	0.0010852	506.8011482581911	44.494	2.6105	44.503	42.78	45.391	0.0084534					109	64	3	0	0	0	0.7932	1	3166	3166		23.042	0	1	373670			28640	886	19166	19176	32598	32598					0.07988378043000921
LITVRLKF	8	Unmodified	_LITVRLKF_					0	0	0		nc|ENSG00000168591|Q71RG4-2|TMUB2;ENSG00000168591|ENST00000538716|TMUB2;nc|ENSG00000168591|Q71RG4-3|TMUB2	nc|ENSG00000168591|Q71RG4-2|TMUB2	nc|ENSG00000168591|Q71RG4-2|TMUB2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.34832763671875	2	495.328945	988.643337	2.8528	0.0014131	-0.050872	-2.5199E-05	2.802	0.0013879	495.32977083959634	109.12	0.29224	109.09	108.92	109.21	-0.029381					11	9	2	0	0	0	0.4196	1	12115	12115		18.324	4.5491	1	345060			28641	6415	19167	19177	32599	32599					0.14856104478940324
LITVTGLPL	9	Unmodified	_LITVTGLPL_					0	0	0			REV__ENST00000472488.5_1_1:160085570-160106822:+|nuORF;REV__nc|ENSG00000163399|P05023-3|ATP1A1	REV__nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.7995910644531	2	463.799686	925.584819	-1.1413	-0.00052933	2.885	0.001338	1.7437	0.00080871	463.8009223906452	41.714	1.3576	41.718	41.166	42.524	0.0043983					77	36	3	0	0	0	0.7932	1	2783	2783		12.207	0	1	388800	+		28642	27261;20912	19168	19178	32600	32600					0.11905003113804469
LITVVPVKS	9	Unmodified	_LITVVPVKS_					0	0	0		nc|ENSG00000162614|Q0ZGT2-4|NEXN;nc|ENSG00000162614|Q0ZGT2-2|NEXN;ENSG00000162614|ENST00000334785|NEXN;nc|ENSG00000162614|Q0ZGT2-3|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.974853515625	2	478.312961	954.611368	-0.91817	-0.00043917	3.0053	0.0014375	2.0871	0.00099831	478.31436803202547	46.891	0.16234	46.91	46.821	46.983	0.018967					5	3	2	0	0	0	0.20789	1	3475	3475		20.947	6.0821	1	38031			28643	5705	19169	19179	32601	32601					0.13224692005144334
LITVVPVKS	9	Unmodified	_LITVVPVKS_					0	0	0		nc|ENSG00000162614|Q0ZGT2-4|NEXN;nc|ENSG00000162614|Q0ZGT2-2|NEXN;ENSG00000162614|ENST00000334785|NEXN;nc|ENSG00000162614|Q0ZGT2-3|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.81219482421875	2	478.312961	954.611368	0.12122	5.7983E-05	2.5739	0.0012311	2.6951	0.0012891	478.3140484852852	36.894	1.4484	36.834	36.308	37.756	-0.060337					63	44	2	0	0	0	0.7932	1	2116	2116		18.262	0.89712	1	89529			28644	5705	19169	19179	32602	32602					0.13224692005144334
LIVAELEL	8	Unmodified	_LIVAELEL_					0	0	0			REV__ENST00000452532.1_1_X:55935193-56041369:+|nuORF	REV__ENST00000452532.1_1_X:55935193-56041369:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2745666503906	2	450.276044	898.537535	-1.1013	-0.00049589	-2.4615	-0.0011084	-3.5628	-0.0016043	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.86791	1	9341	9341		28.254	0	1	26247000	+		28645	26898	19170	19180	32603	32603					0.08420723842789357
LIVAELEL	8	Unmodified	_LIVAELEL_					0	0	0			REV__ENST00000452532.1_1_X:55935193-56041369:+|nuORF	REV__ENST00000452532.1_1_X:55935193-56041369:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2744140625	2	450.276044	898.537535	-1.2506	-0.00056311	-2.4536	-0.0011048	-3.7041	-0.0016679	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.87276	1	9508	9508		29.842	1.9593	1	44812000	+		28646	26898	19170	19180	32604	32604					0.08420723842789357
LIVAELEL	8	Unmodified	_LIVAELEL_					0	0	0			REV__ENST00000452532.1_1_X:55935193-56041369:+|nuORF	REV__ENST00000452532.1_1_X:55935193-56041369:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2742004394531	2	450.276044	898.537535	0.68452	0.00030823	-4.3919	-0.0019776	-3.7074	-0.0016694	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.87276	1	9421	9421		29.842	1.9593	1	41438000	+		28647	26898	19170	19180	32605	32605					0.08420723842789357
LIVAELELWM	10	Unmodified	_LIVAELELWM_					0	0	0			REV__ENST00000452532.1_1_X:55935193-56041369:+|nuORF	REV__ENST00000452532.1_1_X:55935193-56041369:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.8375854492188	2	608.835942	1215.65733	0.093851	5.714E-05	1.6446	0.0010013	1.7384	0.0010584	608.836828431824	110.46	1.0631	110.5	110.23	111.29	0.031738					103	33	4	0	0	0	0.85939	1	12141	12141		23.042	1.0826	1	3714300	+		28648	26898	19171	19181	32606	32606					0.05812969125031486
LIVAIGVK	8	Unmodified	_LIVAIGVK_					0	0	0		nc|ENSG00000152404|Q2TBE0-2|CWF19L2;ENSG00000152404|ENST00000282251|CWF19L2;ENST00000462890.1_1_11:107219611-107224429:-|nuORF	nc|ENSG00000152404|Q2TBE0-2|CWF19L2	nc|ENSG00000152404|Q2TBE0-2|CWF19L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7852478027344	2	406.783839	811.553125	-0.45573	-0.00018539	4.0823	0.0016606	3.6266	0.0014752	406.7853476026277	33.431	0.94502	33.374	32.967	33.912	-0.056385					79	22	4	0	0	0	0.90024	1	2090	2090		39.021	0	1	606440			28649	5172	19172	19182	32607	32607					0.1398105515052066
LIVAIGVK	8	Unmodified	_LIVAIGVK_					0	0	0		nc|ENSG00000152404|Q2TBE0-2|CWF19L2;ENSG00000152404|ENST00000282251|CWF19L2;ENST00000462890.1_1_11:107219611-107224429:-|nuORF	nc|ENSG00000152404|Q2TBE0-2|CWF19L2	nc|ENSG00000152404|Q2TBE0-2|CWF19L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78509521484375	2	406.783839	811.553125	1.1655	0.00047412	2.3762	0.00096659	3.5417	0.0014407	406.7846691604622	32.902	0.76672	33.072	32.59	33.356	0.16971					56	17	4	0	0	0	0.83466	1	2330	2330		23.037	0	1	1453200			28650	5172	19172	19182	32608	32608					0.1398105515052066
LIVAIGVK	8	Unmodified	_LIVAIGVK_					0	0	0		nc|ENSG00000152404|Q2TBE0-2|CWF19L2;ENSG00000152404|ENST00000282251|CWF19L2;ENST00000462890.1_1_11:107219611-107224429:-|nuORF	nc|ENSG00000152404|Q2TBE0-2|CWF19L2	nc|ENSG00000152404|Q2TBE0-2|CWF19L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7852783203125	2	406.783839	811.553125	0.72345	0.00029429	2.8619	0.0011642	3.5854	0.0014585	406.7848598488789	32.675	0.80478	32.887	32.55	33.355	0.21168					52	18	3	0	0	0	0.82464	2	2350	2338;2350		29.842	0	1	1157900			28651	5172	19172	19182	32609;32610	32610					0.1398105515052066
LIVALAAAS	9	Unmodified	_LIVALAAAS_					0	0	0			REV__nc|ENSG00000271503|P13501|CCL5	REV__nc|ENSG00000271503|P13501|CCL5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	414.76171875	2	414.763104	827.511654	0.62314	0.00025846	-3.9205	-0.0016261	-3.2973	-0.0013676	414.7614350932437	88.34	2.6941	88.491	87.941	90.635	0.15054					199	63	6	0	0	0	0.76996	1	8803	8803		33.516	5.2613	1	10002000	+		28652	23982	19173	19183	32611	32611					0.09099874391176854
LIVALAAAS	9	Unmodified	_LIVALAAAS_					0	0	0			REV__nc|ENSG00000271503|P13501|CCL5	REV__nc|ENSG00000271503|P13501|CCL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.7618713378906	2	414.763104	827.511654	1.2689	0.00052628	-4.3284	-0.0017953	-3.0596	-0.001269	414.7612423593211	88.129	2.1347	88.578	88.017	90.152	0.44893					145	51	4	0	0	0	0.77546	1	10346	10346		31.955	3.7006	1	6571000	+		28653	23982	19173	19183	32612	32612					0.09099874391176854
LIVALIRYIVL	11	Unmodified	_LIVALIRYIVL_					0	0	0		nc|ENSG00000174953|Q9H2U1-3|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;ENSG00000174953|ENST00000496811|DHX36	nc|ENSG00000174953|Q9H2U1-3|DHX36	nc|ENSG00000174953|Q9H2U1-3|DHX36	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4057006835938	2	643.433941	1284.85333	0.9427	0.00060657	1.9766	0.0012718	2.9193	0.0018784	643.4349262585075	105.59	0.41755	105.7	105.58	106	0.10766					13	10	2	0	0	0	0.17478	1	11286	11286		15.642	0	1	59270			28654	6978	19174	19184	32613	32613					0.22229722361271342
LIVALPKIIL	10	Unmodified	_LIVALPKIIL_					0	0	0		nc|ENSG00000135119|Q96EX2-3|RNFT2;ENST00000547718.5_1_12:117186478-117290514:+|nuORF;nc|ENSG00000135119|Q96EX2-5|RNFT2;ENSG00000135119|ENST00000257575|RNFT2;nc|ENSG00000135119|Q96EX2-4|RNFT2	nc|ENSG00000135119|Q96EX2-3|RNFT2	nc|ENSG00000135119|Q96EX2-3|RNFT2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8399658203125	2	546.891378	1091.7682	-0.40575	-0.0002219	-0.37446	-0.00020479	-0.78021	-0.00042669	546.8903240103823	101.28	0.79096	101.31	100.7	101.49	0.031036					16	9	2	0	0	0	0.37624	1	10803	10803		17.365	5.1581	1	137090			28655	3986	19175	19185	32614	32614					0.2259897689546051
LIVALPKIIL	10	Unmodified	_LIVALPKIIL_					0	0	0		nc|ENSG00000135119|Q96EX2-3|RNFT2;ENST00000547718.5_1_12:117186478-117290514:+|nuORF;nc|ENSG00000135119|Q96EX2-5|RNFT2;ENSG00000135119|ENST00000257575|RNFT2;nc|ENSG00000135119|Q96EX2-4|RNFT2	nc|ENSG00000135119|Q96EX2-3|RNFT2	nc|ENSG00000135119|Q96EX2-3|RNFT2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8405151367188	2	546.891378	1091.7682	3.3404	0.0018269	-3.6348	-0.0019878	-0.29436	-0.00016098	546.8895684651035	100.78	0.1277	100.73	100.67	100.79	-0.052116					4	2	2	0	0	0	0.37624	1	10942	10942		38.806	17.859	1	19012			28656	3986	19175	19185	32615	32615					0.2259897689546051
LIVAPKLIDQ	10	Unmodified	_LIVAPKLIDQ_					0	0	0			REV__ENSG00000204147|ENST00000647317|ASAH2B	REV__ENSG00000204147|ENST00000647317|ASAH2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.3530883789062	2	555.350074	1108.6856	3.1602	0.001755	2.6303	0.0014608	5.7905	0.0032158	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.86305	1	11039	11039		31.955	4.0726	1	5616800	+		28657	23016	19176	19186	32616	32616					0.13560035096656975
LIVAPKLIDQ	10	Unmodified	_LIVAPKLIDQ_					0	0	0			REV__ENSG00000204147|ENST00000647317|ASAH2B	REV__ENSG00000204147|ENST00000647317|ASAH2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.353515625	2	555.350074	1108.6856	1.3083	0.00072658	4.4118	0.0024501	5.7201	0.0031767	555.3524110053091	100.9	2.53	100.95	100.38	102.91	0.046356					182	60	5	0	0	0	0.86201	1	10823	10823		24.203	3.2558	1	5418400	+		28658	23016	19176	19186	32617	32617					0.13560035096656975
LIVAQPFR	8	Unmodified	_LIVAQPFR_					0	0	0		ENST00000359591.8_1_14:23346768-23347047:+|nuORF	ENST00000359591.8_1_14:23346768-23347047:+|nuORF	ENST00000359591.8_1_14:23346768-23347047:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.287353515625	2	472.28982	942.565087	-0.108	-5.1006E-05	-4.4569	-0.0021049	-4.5649	-0.0021559	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.86288	1	9987	9987		26.796	0.10319	1	46909000			28659	10431	19177	19187	32618	32618					0.09150671893701201
LIVAQPFR	8	Unmodified	_LIVAQPFR_					0	0	0		ENST00000359591.8_1_14:23346768-23347047:+|nuORF	ENST00000359591.8_1_14:23346768-23347047:+|nuORF	ENST00000359591.8_1_14:23346768-23347047:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.287841796875	2	472.28982	942.565087	-1.7052	-0.00080536	-2.8033	-0.001324	-4.5086	-0.0021293	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.884	1	9815	9815		33.516	0.70317	1	40161000			28660	10431	19177	19187	32619	32619					0.09150671893701201
LIVARPVK	8	Unmodified	_LIVARPVK_					0	0	0		nc|ENSG00000144339|Q9UIK5-3|TMEFF2;nc|ENSG00000144339|Q9UIK5-2|TMEFF2;ENSG00000144339|ENST00000272771|TMEFF2	nc|ENSG00000144339|Q9UIK5-3|TMEFF2	nc|ENSG00000144339|Q9UIK5-3|TMEFF2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.23162841796875	2	448.308013	894.601472	0.9993	0.000448	-0.74636	-0.0003346	0.25294	0.0001134	448.3075642472109	82.724	0.68511	82.783	82.383	83.068	0.059166					22	15	2	0	0	0	0.4196	1	8317	8317		7.6903	0	1	62598			28661	4702	19178	19188	32620	32620					0.1499554879040943
LIVARPVK	8	Unmodified	_LIVARPVK_					0	0	0		nc|ENSG00000144339|Q9UIK5-3|TMEFF2;nc|ENSG00000144339|Q9UIK5-2|TMEFF2;ENSG00000144339|ENST00000272771|TMEFF2	nc|ENSG00000144339|Q9UIK5-3|TMEFF2	nc|ENSG00000144339|Q9UIK5-3|TMEFF2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	448.308013	894.601472	-0.14506	-6.5033E-05	0.37062	0.00016615	0.22556	0.00010112	448.308098174829	82.712	0.55841	82.777	82.396	82.954	0.06591	0.11161	0.00040064	NaN	7.6903	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72353			28662	4702	19178	19188							0.1499554879040943
LIVARPVK	8	Unmodified	_LIVARPVK_					0	0	0		nc|ENSG00000144339|Q9UIK5-3|TMEFF2;nc|ENSG00000144339|Q9UIK5-2|TMEFF2;ENSG00000144339|ENST00000272771|TMEFF2	nc|ENSG00000144339|Q9UIK5-3|TMEFF2	nc|ENSG00000144339|Q9UIK5-3|TMEFF2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	448.308013	894.601472	0.51968	0.00023298	-0.71577	-0.00032089	-0.19609	-8.791E-05	448.3075682141932	82.807	0.64281	82.74	82.368	83.011	-0.066185	0.074509	-0.00057345	NaN	7.6903	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93985			28663	4702	19178	19188							0.1499554879040943
LIVARPVK	8	Unmodified	_LIVARPVK_					0	0	0		nc|ENSG00000144339|Q9UIK5-3|TMEFF2;nc|ENSG00000144339|Q9UIK5-2|TMEFF2;ENSG00000144339|ENST00000272771|TMEFF2	nc|ENSG00000144339|Q9UIK5-3|TMEFF2	nc|ENSG00000144339|Q9UIK5-3|TMEFF2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	448.308013	894.601472	0.58532	0.0002624	-0.45884	-0.0002057	0.12648	5.6702E-05	448.30766684330547	82.413	0.63647	82.558	82.244	82.88	0.14551	-0.10774	-0.00034307	NaN	7.6903	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67193			28664	4702	19178	19188							0.1499554879040943
LIVARPVK	8	Unmodified	_LIVARPVK_					0	0	0		nc|ENSG00000144339|Q9UIK5-3|TMEFF2;nc|ENSG00000144339|Q9UIK5-2|TMEFF2;ENSG00000144339|ENST00000272771|TMEFF2	nc|ENSG00000144339|Q9UIK5-3|TMEFF2	nc|ENSG00000144339|Q9UIK5-3|TMEFF2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	448.308013	894.601472	-1.5858	-0.00071091	2.0466	0.00091753	0.46088	0.00020662	448.3087526934464	82.344	0.46667	82.47	82.281	82.747	0.12601	-0.1955	0.0019034	NaN	7.6903	17	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60352			28665	4702	19178	19188							0.1499554879040943
LIVASEYIVL	10	Unmodified	_LIVASEYIVL_					0	0	0		ENST00000587410.1_1_18:77132833-77134205:+|nuORF	ENST00000587410.1_1_18:77132833-77134205:+|nuORF	ENST00000587410.1_1_18:77132833-77134205:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3405151367188	2	560.336633	1118.65871	3.1377	0.0017581	3.0866	0.0017295	6.2243	0.0034877	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.84112	3	11294	11175;11294;11343		37.159	8.0096	1	83033000			28666	14190	19179	19189	32621;32622;32623	32622					0.10412926485469143
LIVASEYIVL	10	Unmodified	_LIVASEYIVL_					0	0	0		ENST00000587410.1_1_18:77132833-77134205:+|nuORF	ENST00000587410.1_1_18:77132833-77134205:+|nuORF	ENST00000587410.1_1_18:77132833-77134205:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3401489257812	2	560.336633	1118.65871	2.2618	0.0012674	4.146	0.0023231	6.4078	0.0035905	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.86452	1	12403	12403		30.504	1.3541	1	14759000			28667	14190	19179	19189	32624	32624					0.10412926485469143
LIVASLPLT	9	Unmodified	_LIVASLPLT_					0	0	0			REV__nc|ENSG00000160838|Q8N4P6-2|LRRC71	REV__nc|ENSG00000160838|Q8N4P6-2|LRRC71	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80084228515625	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.7932	1	3370	3370		17.365	4.4058	1	279560	+		28668	29971	19180	19190	32625	32625					0.11905003113804469
LIVATHISVL	10	Unmodified	_LIVATHISVL_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.3397827148438	2	533.336967	1064.65938	3.0971	0.0016518	2.9068	0.0015503	6.0039	0.0032021	533.3384140007198	99.339	2.8367	99.285	98.69	101.53	-0.053741					182	66	5	0	0	0	0.84112	1	10744	10744		37.159	9.2769	1	3163800	+		28669	24025	19181	19191	32626	32626					0.1296376592517845
LIVAVLGREWL	11	Unmodified	_LIVAVLGREWL_					0	0	0		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.892578125	2	634.889898	1267.76524	-0.0069402	-4.4063E-06	4.0361	0.0025625	4.0292	0.0025581	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.48529	2	10897	10897;11126		52.937	13.684	1	31286000			28670	3545	19182	19192	32627;32628	32627					0.14207101770671215
LIVAVLGREWL	11	Unmodified	_LIVAVLGREWL_					0	0	0		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.892822265625	2	634.889898	1267.76524	-0.13084	-8.307E-05	4.2165	0.002677	4.0856	0.0025939	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.58425	2	11409	11409;11710		45.972	5.1941	1	40768000			28671	3545	19182	19192	32629;32630	32629					0.14207101770671215
LIVAVLGREWL	11	Unmodified	_LIVAVLGREWL_					0	0	0		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.8929443359375	2	634.889898	1267.76524	2.7957	0.0017749	1.1766	0.000747	3.9722	0.0025219	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.58425	3	11819	11603;11819;11867		45.972	10.354	1	42597000			28672	3545	19182	19192	32631;32632;32633	32632					0.14207101770671215
LIVAVLGREWL	11	Unmodified	_LIVAVLGREWL_					0	0	0		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.8931274414062	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.71	1	107.68	107.18	108.18	-0.031487								0	0	0	0.56276	1	11944	11944		37.812	6.2817	1				28673	3545	19182	19192	32634	32634					0.14207101770671215
LIVAVLGREWL	11	Unmodified	_LIVAVLGREWL_					0	0	0		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8931884765625	2	634.889898	1267.76524	1.3476	0.00085558	2.8664	0.0018198	4.214	0.0026754	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.6921	2	11681	11681;11705		32.812	6.1195	1	42647000			28674	3545	19182	19192	32635;32636	32635					0.14207101770671215
LIVAVLGREWL	11	Unmodified	_LIVAVLGREWL_					0	0	0		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8929443359375	2	634.889898	1267.76524	1.4999	0.00095225	2.3399	0.0014856	3.8398	0.0024378	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.65746	1	11431	11431		37.812	3.639	1	68597000			28675	3545	19182	19192	32637	32637					0.14207101770671215
LIVAVLGREWL	11	Unmodified	_LIVAVLGREWL_					0	0	0		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.892822265625	2	634.889898	1267.76524	0.93451	0.00059331	2.8473	0.0018077	3.7818	0.002401	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.45916	5	11407	11407;11419;11431;11444;11456		54.776	7.119	1	69492000			28676	3545	19182	19192	32638;32639;32640;32641;32642	32638					0.14207101770671215
LIVAVLGREWL	11	Unmodified	_LIVAVLGREWL_					0	0	0		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8931884765625	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.51	1	107.6	107.1	108.1	0.091255								0	0	0	0.56276	1	11545	11545		49.442	7.0454	1				28677	3545	19182	19192	32643	32643					0.14207101770671215
LIVAVLGREWL	11	Unmodified	_LIVAVLGREWL_					0	0	0		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8932495117188	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.76	1	107.85	107.35	108.35	0.091255								0	0	0	0.56276	1	11581	11581		45.972	6.7194	1				28678	3545	19182	19192	32644	32644					0.14207101770671215
LIVAVLGREWL	11	Unmodified	_LIVAVLGREWL_					0	0	0		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8927001953125	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.32	1	105.51	105.01	106.01	0.18647								0	0	0	0.56276	1	12877	12877		32.812	3.6424	1				28679	3545	19182	19192	32645	32645					0.14207101770671215
LIVAVLGREWL	11	Unmodified	_LIVAVLGREWL_					0	0	0		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8930053710938	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.58	1	105.77	105.27	106.27	0.18647								0	0	0	0.56276	1	12913	12913		37.812	4.9991	1				28680	3545	19182	19192	32646	32646					0.14207101770671215
LIVCVHFLQHS	11	Unmodified	_LIVCVHFLQHS_					0	0	0			REV__ENSG00000137819|ENST00000395407|PAQR5	REV__ENSG00000137819|ENST00000395407|PAQR5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3934936523438	2	648.350083	1294.68561	1.6035	0.0010396	-0.80599	-0.00052257	0.79752	0.00051707	648.3498053796535	106.97	0.41771	107.11	106.94	107.36	0.13866					16	10	2	0	0	0	0.17442	1	11496	11496		14.865	0	1	198590	+		28681	19413	19183	19193	32647	32647					0.05005711825015169
LIVDAIPA	8	Unmodified	_LIVDAIPA_					0	0	0			REV__nc|ENSG00000023228|P28331-5|NDUFS1	REV__nc|ENSG00000023228|P28331-5|NDUFS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2481384277344	2	406.249829	810.485105	-1.8141	-0.00073698	-1.2967	-0.0005268	-3.1108	-0.0012638	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.87276	1	8947	8947		29.842	0	1	42617000	+		28682	16247	19184	19194	32648	32648					0.07228185499843676
LIVDAIPA	8	Unmodified	_LIVDAIPA_					0	0	0			REV__nc|ENSG00000023228|P28331-5|NDUFS1	REV__nc|ENSG00000023228|P28331-5|NDUFS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24822998046875	2	406.249829	810.485105	0.73391	0.00029815	-3.7175	-0.0015102	-2.9836	-0.0012121	406.248260413121	111.47	0.7254	111.54	111.15	111.88	0.069542					33	24	2	0	0	0	0.82464	1	11987	11987		21.702	0	1	102910	+		28683	16247	19184	19194	32649	32649					0.07228185499843676
LIVDARLM	8	Unmodified	_LIVDARLM_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774658203125	2	465.775688	929.536823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.619	1	79.563	79.063	80.063	-0.056503								0	0	0	0.29497	1	7975	7975		34.173	0	1		+		28684	21140	19185	19195	32650	32650					0.06923605922099796
LIVDARLM	8	Unmodified	_LIVDARLM_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.77703857421875	2	465.775688	929.536823	-0.25577	-0.00011913	4.2902	0.0019982	4.0344	0.0018791	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.85277	1	7987	7987		25.45	0.94616	1	451640	+		28685	21140	19185	19195	32651	32651					0.06923605922099796
LIVDARLM	8	Unmodified	_LIVDARLM_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7778625488281	2	465.775688	929.536823	-0.22002	-0.00010248	4.439	0.0020676	4.2189	0.0019651	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.91005	1	9522	9522		42.474	7.2737	1	1042300	+		28686	21140	19185	19195	32652	32652					0.06923605922099796
LIVDCLTKQK	10	Unmodified	_LIVDCLTKQK_					0	0	0			REV__ENSG00000122550|ENST00000339077|KLHL7	REV__ENSG00000122550|ENST00000339077|KLHL7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.8405151367188	2	580.839017	1159.66348	-0.88113	-0.0005118	3.4431	0.0019999	2.562	0.0014881	580.8408357600173	69.895	0.91608	69.925	69.626	70.542	0.030502					112	46	3	0	0	0	0.86718	1	6626	6626		27.882	1.0861	1	15247000	+		28687	18504	19186	19196	32653	32653					0.090034873565628
LIVDFLFIL	9	Unmodified	_LIVDFLFIL_					0	0	0		ENST00000506864.5_1_4:90472711-90509087:+|nuORF	ENST00000506864.5_1_4:90472711-90509087:+|nuORF	ENST00000506864.5_1_4:90472711-90509087:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.84033203125	2	546.838811	1091.66307	-0.41161	-0.00022509	1.9321	0.0010565	1.5204	0.00083144	546.8400747085221	101.16	3.89	101.19	100.52	104.41	0.031036					283	93	6	0	0	0	0.76996	1	10755	10755		33.516	4.366	1	40007000			28688	12946	19187	19197	32654	32654					0.12090435699042246
LIVDFLFIL	9	Unmodified	_LIVDFLFIL_					0	0	0		ENST00000506864.5_1_4:90472711-90509087:+|nuORF	ENST00000506864.5_1_4:90472711-90509087:+|nuORF	ENST00000506864.5_1_4:90472711-90509087:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.8399047851562	2	546.838811	1091.66307	0.19665	0.00010754	1.2699	0.00069442	1.4665	0.00080195	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.72402	2	10597	10561;10597		38.806	5.2906	1	55511000			28689	12946	19187	19197	32655;32656	32656					0.12090435699042246
LIVDFLFIL	9	Unmodified	_LIVDFLFIL_					0	0	0		ENST00000506864.5_1_4:90472711-90509087:+|nuORF	ENST00000506864.5_1_4:90472711-90509087:+|nuORF	ENST00000506864.5_1_4:90472711-90509087:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8399658203125	2	546.838811	1091.66307	0.84844	0.00046396	0.94515	0.00051684	1.7936	0.0009808	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.76996	1	10590	10590		33.516	4.366	1	43597000			28690	12946	19187	19197	32657	32657					0.12090435699042246
LIVDFLFIL	9	Unmodified	_LIVDFLFIL_					0	0	0		ENST00000506864.5_1_4:90472711-90509087:+|nuORF	ENST00000506864.5_1_4:90472711-90509087:+|nuORF	ENST00000506864.5_1_4:90472711-90509087:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8408203125	2	546.838811	1091.66307	0.96702	0.0005288	1.2571	0.00068743	2.2241	0.0012162	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.76996	1	12190	12190		33.516	4.366	1	9124000			28691	12946	19187	19197	32658	32658					0.12090435699042246
LIVDLNCAKA	10	Unmodified	_LIVDLNCAKA_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.3070678710938	2	530.296985	1058.57942	0.23822	0.00012633	-0.61015	-0.00032356	-0.37193	-0.00019723	530.2969406136358	63.705	0.97394	64.259	63.879	64.853	0.55449					44	22	3	0	0	0	0.37624	1	6842	6842		15.642	3.435	1	150720	+		28692	20903	19188	19198	32659	32659					0.052469562596797914
LIVDMSPEAEP	11	Oxidation (M)	_LIVDM(Oxidation (M))SPEAEP_		LIVDM(1)SPEAEP		LIVDM(51)SPEAEP	0	0	1			REV__ENSG00000142182|ENST00000628202|DNMT3L	REV__ENSG00000142182|ENST00000628202|DNMT3L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.79052734375	2	608.791929	1215.5693	0.43769	0.00026646	-2.9263	-0.0017815	-2.4886	-0.0015151	608.7900262899765	85.729	1.5961	86.172	85.584	87.18	0.44331					115	38	5	0	0	0	0.51007	1	9975	9975		51.193	8.3284	1	5815000	+		28693	19726	19189	19199	32660	32660		292			-0.029856962562234912
LIVDPLEAI	9	Unmodified	_LIVDPLEAI_					0	0	0		nc|ENSG00000235217|Q9H489|TSPY26P;ENST00000476365.2_1_20:30777007-30778297:-|nuORF	nc|ENSG00000235217|Q9H489|TSPY26P	nc|ENSG00000235217|Q9H489|TSPY26P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7970275878906	2	491.794601	981.574648	-0.95582	-0.00047007	3.0538	0.0015018	2.098	0.0010318	491.79612787684647	68.727	0.97743	68.792	68.154	69.131	0.065514					60	39	2	0	0	0	0.7932	1	6115	6115		24.203	2.2429	1	97450			28694	12335	19190	19200	32661	32661					0.08312395388554705
LIVEICALQ	9	Unmodified	_LIVEICALQ_					0	0	0		ENST00000449739.6_1_4:73923833-73935428:-|nuORF;nc|ENSG00000163626|Q8N8Q8|COX18;ENSG00000163626|ENST00000507544|COX18	ENST00000449739.6_1_4:73923833-73935428:-|nuORF	ENST00000449739.6_1_4:73923833-73935428:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904052734375	2	501.288628	1000.5627	0.79118	0.00039661	3.2679	0.0016381	4.0591	0.0020348	501.2901383421254	99.319	1.3116	99.476	99.033	100.34	0.15659					65	30	3	0	0	0	0.78058	1	10355	10355		30.504	1.3541	1	683540			28695	5840	19191	19201	32662	32662					0.06244455373735036
LIVEPSREL	9	Unmodified	_LIVEPSREL_					0	0	0		nc|ENSG00000079785|Q92499-3|DDX1;nc|ENSG00000079785|Q92499-2|DDX1;ENSG00000079785|ENST00000233084|DDX1	nc|ENSG00000079785|Q92499-3|DDX1	nc|ENSG00000079785|Q92499-3|DDX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.3059692382812	2	528.308406	1054.60226	0.49305	0.00026048	-0.85328	-0.0004508	-0.36024	-0.00019032	528.3077809942157	51.713	0.6302	52.148	51.822	52.452	0.43505					38	14	3	0	0	0	0.44421	2	5139	5139;5149		54.776	4.7518	1	1299700			28696	1427	19192	19202	32663;32664	32663					0.07714298648807016
LIVEPSREL	9	Unmodified	_LIVEPSREL_					0	0	0		nc|ENSG00000079785|Q92499-3|DDX1;nc|ENSG00000079785|Q92499-2|DDX1;ENSG00000079785|ENST00000233084|DDX1	nc|ENSG00000079785|Q92499-3|DDX1	nc|ENSG00000079785|Q92499-3|DDX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.305908203125	2	528.308406	1054.60226	0.78386	0.00041412	-1.1027	-0.00058259	-0.31889	-0.00016847	528.3077184555888	51.531	0.7433	52.198	51.733	52.477	0.6673					42	17	3	0	0	0	0.51592	1	5151	5151		51.193	1.1682	1	1197100			28697	1427	19192	19202	32665	32665					0.07714298648807016
LIVEVIGTI	9	Unmodified	_LIVEVIGTI_					0	0	0			REV__ENSG00000173334|ENST00000311922|TRIB1	REV__ENSG00000173334|ENST00000311922|TRIB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80584716796875	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.7932	1	2789	2789		12.207	0	1	371600	+		28698	21916	19193	19203	32666	32666					0.11580985768239316
LIVFALRIALL	11	Unmodified	_LIVFALRIALL_					0	0	0			REV__nc|ENSG00000185101|A1A5B4-2|ANO9	REV__nc|ENSG00000185101|A1A5B4-2|ANO9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.392578125	2	621.420834	1240.82712	0.69162	0.00042979	-1.1285	-0.0007013	-0.43693	-0.00027152	621.4196260256065	104.57	0.24219	104.61	104.38	104.63	0.039856					6	5	2	0	0	0	0.17478	1	11364	11364		21.96	0	1	81776	+		28699	22736	19194	19204	32667	32667					0.2163345318977008
LIVFFVTPL	9	Unmodified	_LIVFFVTPL_					0	0	0			REV__ENST00000514199.1_1_5:139944539-139945076:+|nuORF	REV__ENST00000514199.1_1_5:139944539-139945076:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8272094726562	2	524.825704	1047.63685	-0.1321	-6.933E-05	2.2122	0.001161	2.0801	0.0010917	524.8267772586088	99.003	3.4379	99.226	98.52	101.96	0.22263					298	81	5	0	0	0	0.76996	1	10479	10479		33.516	3.674	1	31133000	+		28700	28007	19195	19205	32668	32668					0.1149416652756372
LIVFFVTPL	9	Unmodified	_LIVFFVTPL_					0	0	0			REV__ENST00000514199.1_1_5:139944539-139945076:+|nuORF	REV__ENST00000514199.1_1_5:139944539-139945076:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8276977539062	2	524.825704	1047.63685	0.8139	0.00042716	1.4579	0.00076513	2.2718	0.0011923	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.7932	1	10486	10486		26.796	2.5934	1	27719000	+		28701	28007	19195	19205	32669	32669					0.1149416652756372
LIVFLHIQKTG	11	Unmodified	_LIVFLHIQKTG_					0	0	0		nc|ENSG00000171004|Q96MM7-2|HS6ST2;nc|ENSG00000171004|Q96MM7-3|HS6ST2;nc|ENSG00000171004|Q96MM7|HS6ST2;ENSG00000171004|ENST00000370833|HS6ST2	nc|ENSG00000171004|Q96MM7-2|HS6ST2	nc|ENSG00000171004|Q96MM7-2|HS6ST2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8934936523438	2	634.889898	1267.76524	1.9684	0.0012497	2.2129	0.0014049	4.1812	0.0026546	634.8913842364989	105.48	2.7267	105.63	104.93	107.65	0.15583					244	94	5	0	0	0	0.69995	1	12786	12786		31.53	7.3271	1	2461800			28702	6631	19196	19206	32670	32670					0.14207101770648478
LIVFVVNLHSK	11	Unmodified	_LIVFVVNLHSK_					0	0	0		nc|ENSG00000100162|Q9NSP4-4|CENPM;nc|ENSG00000100162|Q9NSP4-2|CENPM;ENST00000396437.3_1_22:42341142-42343146:-|nuORF;ENSG00000100162|ENST00000215980|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8941040039062	2	634.889898	1267.76524	1.3476	0.00085558	2.8664	0.0018198	4.214	0.0026754	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.45916	5	11729	11513;11633;11669;11729;11778		54.776	11.912	1	42647000			28703	1804	19197	19207	32671;32672;32673;32674;32675	32674					0.14207101770648478
LIVFVVNLHSK	11	Unmodified	_LIVFVVNLHSK_					0	0	0		nc|ENSG00000100162|Q9NSP4-4|CENPM;nc|ENSG00000100162|Q9NSP4-2|CENPM;ENST00000396437.3_1_22:42341142-42343146:-|nuORF;ENSG00000100162|ENST00000215980|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8935546875	2	634.889898	1267.76524	1.4999	0.00095225	2.3399	0.0014856	3.8398	0.0024378	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.60058	2	11322	11322;11493		44.377	5.8567	1	68597000			28704	1804	19197	19207	32676;32677	32676					0.14207101770648478
LIVFVVNLHSK	11	Unmodified	_LIVFVVNLHSK_					0	0	0		nc|ENSG00000100162|Q9NSP4-4|CENPM;nc|ENSG00000100162|Q9NSP4-2|CENPM;ENST00000396437.3_1_22:42341142-42343146:-|nuORF;ENSG00000100162|ENST00000215980|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8931274414062	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.59	1	107.68	107.18	108.18	0.091255								0	0	0	0.56276	1	11556	11556		30.318	2.2362	1				28705	1804	19197	19207	32678	32678					0.14207101770648478
LIVFVVNLHSK	11	Unmodified	_LIVFVVNLHSK_					0	0	0		nc|ENSG00000100162|Q9NSP4-4|CENPM;nc|ENSG00000100162|Q9NSP4-2|CENPM;ENST00000396437.3_1_22:42341142-42343146:-|nuORF;ENSG00000100162|ENST00000215980|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8930053710938	2	634.889898	1267.76524	1.9684	0.0012497	2.2129	0.0014049	4.1812	0.0026546	634.8913842364989	105.48	2.7267	105.63	104.93	107.65	0.15583					244	94	5	0	0	0	0.66929	1	12810	12810		36.447	7.2972	1	2461800			28706	1804	19197	19207	32679	32679					0.14207101770648478
LIVFVVNLHSK	11	Unmodified	_LIVFVVNLHSK_					0	0	0		nc|ENSG00000100162|Q9NSP4-4|CENPM;nc|ENSG00000100162|Q9NSP4-2|CENPM;ENST00000396437.3_1_22:42341142-42343146:-|nuORF;ENSG00000100162|ENST00000215980|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8928833007812	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.41	1	105.59	105.09	106.09	0.18647								0	0	0	0.56276	1	12889	12889		31.53	0	1				28707	1804	19197	19207	32680	32680					0.14207101770648478
LIVGKGII	8	Unmodified	_LIVGKGII_					0	0	0		ENST00000220562.8_1_8:28559161-28573151:+|nuORF;ENST00000518223.1_1_8:28567978-28573151:+|nuORF	ENST00000220562.8_1_8:28559161-28573151:+|nuORF	ENST00000220562.8_1_8:28559161-28573151:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	2	406.783839	811.553125	-0.45573	-0.00018539	4.0823	0.0016606	3.6266	0.0014752	406.7853476026277	33.431	0.94502	33.374	32.967	33.912	-0.056385					79	22	4	0	0	0	0.82464	1	2042	2042		21.702	0	1	606440			28708	9165	19198	19208	32681	32681					0.13981055150509292
LIVGKGII	8	Unmodified	_LIVGKGII_					0	0	0		ENST00000220562.8_1_8:28559161-28573151:+|nuORF;ENST00000518223.1_1_8:28567978-28573151:+|nuORF	ENST00000220562.8_1_8:28559161-28573151:+|nuORF	ENST00000220562.8_1_8:28559161-28573151:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852478027344	2	406.783839	811.553125	1.9606	0.00079753	1.7235	0.0007011	3.6841	0.0014986	406.7843974234306	33.155	0.95889	33.153	32.87	33.829	-0.0016365					72	22	4	0	0	0	0.87276	1	1970	1970		29.842	1.5873	1	517740			28709	9165	19198	19208	32682	32682					0.13981055150509292
LIVGLTIPIL	10	Unmodified	_LIVGLTIPIL_					0	0	0			REV__ENSG00000175782|ENST00000398004|SLC35E3	REV__ENSG00000175782|ENST00000398004|SLC35E3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3611450195312	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.88106	1	1789	1789		12.207	0	1	1221500	+		28710	22083	19199	19209	32683	32683					0.18194411107424457
LIVGRRASA	9	Unmodified	_LIVGRRASA_					0	0	0			REV__nc|ENSG00000203706|Q5TG53-2|SERTAD4-AS1	REV__nc|ENSG00000203706|Q5TG53-2|SERTAD4-AS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2856750488281	2	471.795801	941.577048	0.77497	0.00036563	-0.84771	-0.00039995	-0.072744	-3.4321E-05	471.7953974725306	103.26	0.90387	103.38	103.17	104.08	0.12622					28	22	2	0	0	0	0.20789	1	10976	10976		29.15	0	1	211210	+		28711	26714	19200	19210	32684	32684					0.1039228863688777
LIVGRRASA	9	Unmodified	_LIVGRRASA_					0	0	0			REV__nc|ENSG00000203706|Q5TG53-2|SERTAD4-AS1	REV__nc|ENSG00000203706|Q5TG53-2|SERTAD4-AS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	471.795801	941.577048	2.801	0.0013215	-2.6187	-0.0012355	0.18226	8.5989E-05	471.79425998182387	103.55	0.47813	103.51	103.2	103.68	-0.043755	0.053339	-0.0026873	NaN	29.15	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73671	+		28712	26714	19200	19210							0.1039228863688777
LIVGRRASA	9	Unmodified	_LIVGRRASA_					0	0	0			REV__nc|ENSG00000203706|Q5TG53-2|SERTAD4-AS1	REV__nc|ENSG00000203706|Q5TG53-2|SERTAD4-AS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	471.795801	941.577048	-1.7068	-0.00080526	1.5901	0.00075022	-0.11666	-5.504E-05	471.79652999240375	103.36	0.82249	103.47	103.15	103.97	0.11494	0.017303	0.0012841	NaN	29.15	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	196500	+		28713	26714	19200	19210							0.1039228863688777
LIVGVASCIAS	11	Unmodified	_LIVGVASCIAS_					0	0	0			REV__ENSG00000166959|ENST00000300226|MS4A8	REV__ENSG00000166959|ENST00000300226|MS4A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.79345703125	2	516.791535	1031.56852	0.70992	0.00036688	3.0022	0.0015515	3.7121	0.0019184	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.7342	1	8890	8890		25.574	2.5316	1	842420	+		28714	21344	19201	19211	32685	32685					0.053995538853769176
LIVGVLPDS	9	Unmodified	_LIVGVLPDS_					0	0	0			REV__nc|ENSG00000187955|Q05707-3|COL14A1	REV__nc|ENSG00000187955|Q05707-3|COL14A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7723388671875	2	456.773668	911.532783	-1.1318	-0.00051697	-1.3725	-0.00062691	-2.5043	-0.0011439	456.7727770907754	90.264	1.662	90.264	89.603	91.265	0					93	38	4	0	0	0	0.76996	1	8780	8780		33.516	4.366	1	669440	+		28715	22963	19202	19212	32686	32686					0.07347839700048553
LIVGVSPEVI	10	Unmodified	_LIVGVSPEVI_					0	0	0		ENST00000216605.12_1_14:64925007-64926650:+|nuORF;ENST00000556284.1_1_14:64925347-64926650:+|nuORF	ENST00000216605.12_1_14:64925007-64926650:+|nuORF	ENST00000216605.12_1_14:64925007-64926650:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3196411132812	2	513.3157	1024.61685	-0.35462	-0.00018203	2.3175	0.0011896	1.9629	0.0010076	513.3169096731813	53.695	2.201	53.717	52.714	54.915	0.022537					86	65	3	0	0	0	0.86201	1	4724	4724		24.203	2.5004	1	230160			28716	9145	19203	19213	32687	32687					0.10552370796949617
LIVHGKTLLL	10	Unmodified	_LIVHGKTLLL_					0	0	0			REV__ENSG00000166866|ENST00000300119|MYO1A	REV__ENSG00000166866|ENST00000300119|MYO1A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8299560546875	2	553.868434	1105.72232	-0.78144	-0.00043282	0.34621	0.00019176	-0.43523	-0.00024106	553.8672463155094	90.252	0.17123	90.321	90.257	90.428	0.069328					5	3	2	0	0	0	0.37624	1	9249	9249		14.865	0	1	24273	+		28717	21332	19204	19214	32688	32688					0.1736833171323724
LIVHLKRYSL	10	Unmodified	_LIVHLKRYSL_					0	0	0		ENSG00000134588|ENST00000511190|USP26	ENSG00000134588|ENST00000511190|USP26	ENSG00000134588|ENST00000511190|USP26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3927612304688	2	621.390065	1240.76558	2.9766	0.0018496	1.2761	0.00079293	4.2527	0.0026426	621.3907359645153	104.71	2.7313	104.66	104.1	106.83	-0.04039					247	64	5	0	0	0	0.80179	1	11589	11589		39.253	0	1	12926000			28718	3947	19205	19215	32689	32689					0.1548252149052587
LIVHLKRYSL	10	Unmodified	_LIVHLKRYSL_					0	0	0		ENSG00000134588|ENST00000511190|USP26	ENSG00000134588|ENST00000511190|USP26	ENSG00000134588|ENST00000511190|USP26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3931274414062	2	621.390065	1240.76558	1.3	0.00080781	2.97	0.0018456	4.2701	0.0026534	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.86718	1	11386	11386		27.882	2.3082	1	23079000			28719	3947	19205	19215	32690	32690					0.1548252149052587
LIVILTLPLT	10	Unmodified	_LIVILTLPLT_					0	0	0			REV__ENSG00000197106|ENST00000331565|SLC6A17	REV__ENSG00000197106|ENST00000331565|SLC6A17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3759155273438	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.85438	1	2522	2522		16.473	0.83134	1	314410	+		28720	23197	19206	19216	32691	32691					0.18790680278880245
LIVIRLNH	8	Unmodified	_LIVIRLNH_					0	0	0		nc|ENSG00000249730|P0C629|OR10J4	nc|ENSG00000249730|P0C629|OR10J4	nc|ENSG00000249730|P0C629|OR10J4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.3135986328125	2	489.316369	976.618185	-0.66551	-0.00032564	-4.0957	-0.0020041	-4.7612	-0.0023297	489.3142377106515	95.017	1.7009	95.248	94.736	96.437	0.23103					105	40	4	0	0	0	0.81548	1	9770	9770		20.482	0	1	1344100			28721	15286	19207	19217	32692	32692					0.1289404967635619
LIVISHIALGT	11	Unmodified	_LIVISHIALGT_					0	0	0			REV__ENSG00000106688|ENST00000262352|SLC1A1	REV__ENSG00000106688|ENST00000262352|SLC1A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8538208007812	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.7342	1	10738	10738		25.574	2.5316	1	34546000	+		28722	17624	19208	19218	32693	32693					0.13407437470914374
LIVISHIALGT	11	Unmodified	_LIVISHIALGT_					0	0	0			REV__ENSG00000106688|ENST00000262352|SLC1A1	REV__ENSG00000106688|ENST00000262352|SLC1A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8548583984375	2	568.855524	1135.69649	-1.3907	-0.00079112	-2.9165	-0.001659	-4.3072	-0.0024502	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.72918	1	10812	10812		26.693	0	1	72465000	+		28723	17624	19208	19218	32694	32694					0.13407437470914374
LIVISYSLII	10	Unmodified	_LIVISYSLII_					0	0	0		ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3623046875	2	567.36265	1132.71075	-1.2185	-0.00069132	2.7113	0.0015383	1.4929	0.000847	567.3640514854945	44.308	2.4797	44.308	43.541	46.02	0					178	60	4	0	0	0	0.84112	3	3145	3124;3145;3203		37.159	6.3009	1	1364200			28724	4141	19209	19219	32695;32696;32697	32696					0.1497008989922506
LIVISYSLII	10	Unmodified	_LIVISYSLII_					0	0	0		ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3632202148438	2	567.36265	1132.71075	-0.8743	-0.00049604	2.4089	0.0013667	1.5346	0.00087069	567.3638800486743	44.538	2.1986	44.515	43.895	46.093	-0.023079					155	51	5	0	0	0	0.84112	5	3539	3398;3467;3479;3539;3551		37.159	6.6555	1	2273000			28725	4141	19209	19219	32698;32699;32700;32701;32702	32701					0.1497008989922506
LIVISYSLII	10	Unmodified	_LIVISYSLII_					0	0	0		ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.363037109375	2	567.36265	1132.71075	-0.82344	-0.00046719	2.4008	0.0013621	1.5773	0.00089493	567.3638410249442	44.579	2.1787	44.545	43.955	46.134	-0.03347					156	50	5	0	0	0	0.85939	5	3550	3505;3550;3586;3624;3636		30.504	6.3009	1	2613600			28726	4141	19209	19219	32703;32704;32705;32706;32707	32704					0.1497008989922506
LIVISYSLII	10	Unmodified	_LIVISYSLII_					0	0	0		ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3629760742188	2	567.36265	1132.71075	0.20972	0.00011899	1.3081	0.00074215	1.5178	0.00086113	567.3632440181018	44.63	2.2677	44.626	43.93	46.198	-0.0041618					153	53	5	0	0	0	0.81018	5	3578	3483;3541;3565;3578;3598		38.806	7.4612	1	2377000			28727	4141	19209	19219	32708;32709;32710;32711;32712	32711					0.1497008989922506
LIVISYSLII	10	Unmodified	_LIVISYSLII_					0	0	0		ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.363525390625	2	567.36265	1132.71075	0.39672	0.00022508	1.2522	0.00071043	1.6489	0.00093552	567.363221347754	44.24	2.8558	44.249	42.808	45.664	0.0084534					165	70	4	0	0	0	0.86201	2	3134	3101;3134		31.955	5.8783	1	1167000			28728	4141	19209	19219	32713;32714	32714					0.1497008989922506
LIVISYSLII	10	Unmodified	_LIVISYSLII_					0	0	0		ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3616333007812	2	567.36265	1132.71075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.057	1	62.164	61.664	62.664	0.10743								0	0	0	0.45132	1	5404	5404		24.203	3.2558	1				28729	4141	19209	19219	32715	32715					0.1497008989922506
LIVISYSLII	10	Unmodified	_LIVISYSLII_					0	0	0		ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3631591796875	2	567.36265	1132.71075	0.36025	0.00020439	1.3571	0.00076996	1.7173	0.00097435	567.3632714206227	44.36	2.296	44.409	43.67	45.966	0.048996					151	56	4	0	0	0	0.85939	5	3124	3055;3078;3112;3124;3215		30.504	6.3009	1	1558100			28730	4141	19209	19219	32716;32717;32718;32719;32720	32719					0.1497008989922506
LIVISYSLII	10	Unmodified	_LIVISYSLII_					0	0	0		ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3632202148438	2	567.36265	1132.71075	0.15466	8.7749E-05	1.5374	0.00087224	1.692	0.00095999	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.86201	3	3110	3099;3110;3167		30.504	4.9296	1	1937600			28731	4141	19209	19219	32721;32722;32723	32722					0.1497008989922506
LIVISYSLII	10	Unmodified	_LIVISYSLII_					0	0	0		ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.363037109375	2	567.36265	1132.71075	-1.4485	-0.00082182	2.3813	0.001351	0.93278	0.00052922	567.3639779227798	42.372	2.1865	42.806	41.562	43.749	0.4334					145	55	5	0	0	0	0.86718	1	3739	3739		27.882	5.9224	1	13610000			28732	4141	19209	19219	32724	32724					0.1497008989922506
LIVISYSLII	10	Unmodified	_LIVISYSLII_					0	0	0		ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	ENSG00000136839|ENST00000259362|OR13C9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3634033203125	2	567.36265	1132.71075	-0.94241	-0.00053469	1.9029	0.0010796	0.96052	0.00054496	567.3637060270148	42.168	1.9304	42.865	42.418	44.348	0.69754					144	47	5	0	0	0	0.86589	1	3745	3745		29.15	6.1071	1	16501000			28733	4141	19209	19219	32725	32725					0.1497008989922506
LIVITLYVIS	10	Unmodified	_LIVITLYVIS_					0	0	0		nc|ENSG00000117322|P20023-2|CR2;nc|ENSG00000117322|P20023|CR2;nc|ENSG00000117322|P20023-4|CR2;ENSG00000117322|ENST00000367057|CR2	nc|ENSG00000117322|P20023-2|CR2	nc|ENSG00000117322|P20023-2|CR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3628540039062	2	567.36265	1132.71075	0.15466	8.7749E-05	1.5374	0.00087224	1.692	0.00095999	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.85694	1	3065	3065		21.96	1.013	1	1937600			28734	2971	19210	19220	32726	32726					0.1497008989922506
LIVIWIILAHK	11	Unmodified	_LIVIWIILAHK_					0	0	0		ENSG00000169836|ENST00000304883|TACR3	ENSG00000169836|ENST00000304883|TACR3	ENSG00000169836|ENST00000304883|TACR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.29229736328125	3	440.291831	1317.85366	0.37062	0.00016318	0.89378	0.00039353	1.2644	0.00055671	440.29198732058745	59.638	1.194	59.752	59.25	60.444	0.11396					105	36	4	0	0	0	0.7896	1	5122	5122		13.508	2.4112	1	260900			28735	6527	19211	19221	32727	32727					0.20745142081113954
LIVKARFN	8	Unmodified	_LIVKARFN_					0	0	0		nc|ENSG00000129675|Q15052-2|ARHGEF6;ENSG00000129675|ENST00000250617|ARHGEF6	nc|ENSG00000129675|Q15052-2|ARHGEF6	nc|ENSG00000129675|Q15052-2|ARHGEF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.80108642578125	2	480.803094	959.591636	-0.79097	-0.0003803	-4.038	-0.0019415	-4.829	-0.0023218	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.88915	1	9913	9913		35.201	3.2459	1	18644000			28736	3601	19212	19222	32728	32728					0.1102236078503438
LIVKARFN	8	Unmodified	_LIVKARFN_					0	0	0		nc|ENSG00000129675|Q15052-2|ARHGEF6;ENSG00000129675|ENST00000250617|ARHGEF6	nc|ENSG00000129675|Q15052-2|ARHGEF6	nc|ENSG00000129675|Q15052-2|ARHGEF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8006896972656	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.9159	1	9917	9917		44.531	11.038	1	17379000			28737	3601	19212	19222	32729	32729					0.1102236078503438
LIVKGFIHVIA	11	Unmodified	_LIVKGFIHVIA_					0	0	0			REV__nc|ENSG00000163053|Q7RTX9-2|SLC16A14	REV__nc|ENSG00000163053|Q7RTX9-2|SLC16A14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.3892211914062	2	605.389534	1208.76451	-0.53776	-0.00032555	0.96055	0.0005815	0.42279	0.00025595	605.3900141549213	45.074	0.91728	45.043	44.621	45.538	-0.031067					52	20	3	0	0	0	0.71207	1	3630	3630		34.173	9.9407	1	360790	+		28738	20876	19213	19223	32730	32730					0.1684830712160874
LIVKIEGT	8	Unmodified	_LIVKIEGT_					0	0	0			REV__ENSG00000169306|ENST00000378993|IL1RAPL1	REV__ENSG00000169306|ENST00000378993|IL1RAPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7746887207031	2	436.776211	871.537869	-0.16229	-7.0884E-05	-2.9337	-0.0012814	-3.096	-0.0013523	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.84341	1	9480	9480		24.203	4.8428	1	15341000	+		28739	21569	19214	19224	32731	32731					0.09696143562666748
LIVKIEGT	8	Unmodified	_LIVKIEGT_					0	0	0			REV__ENSG00000169306|ENST00000378993|IL1RAPL1	REV__ENSG00000169306|ENST00000378993|IL1RAPL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.7748107910156	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.87479	1	9162	9162		30.504	3.7075	1	13819000	+		28740	21569	19214	19224	32732	32732					0.09696143562666748
LIVKYSSPR	9	Unmodified	_LIVKYSSPR_					0	0	0			REV__ENSG00000122194|ENST00000308192|PLG	REV__ENSG00000122194|ENST00000308192|PLG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.816650390625	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.78536	1	8458	8458		29.15	1.2673	1	1159800	+		28741	18484	19215	19225	32733	32733					0.09498308748334239
LIVLAAPSV	9	Unmodified	_LIVLAAPSV_					0	0	0			REV__ENST00000547760.1_3_14:31897374-31926552:-|nuORF	REV__ENST00000547760.1_3_14:31897374-31926552:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7871398925781	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.7932	1	2859	2859		20.482	0	1	15753000	+		28742	28559	19216	19226	32734	32734					0.11308733942325944
LIVLAAPSV	9	Unmodified	_LIVLAAPSV_					0	0	0			REV__ENST00000547760.1_3_14:31897374-31926552:-|nuORF	REV__ENST00000547760.1_3_14:31897374-31926552:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.78643798828125	2	441.786579	881.558604	-1.1834	-0.00052282	2.9635	0.0013093	1.7801	0.00078643	441.78771241232647	40.14	0.99562	40.729	39.913	40.908	0.58915					63	23	3	0	0	0	0.7932	1	3421	3421		20.482	1.1219	1	2890500	+		28743	28559	19216	19226	32735	32735					0.11308733942325944
LIVLLPALLD	10	Unmodified	_LIVLLPALLD_					0	0	0			REV__ENST00000473458.5_1_22:25240737-25320238:+|nuORF	REV__ENST00000473458.5_1_22:25240737-25320238:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.3585815429688	2	540.357368	1078.70018	0.26404	0.00014267	2.2426	0.0012118	2.5067	0.0013545	540.3583702946399	36.686	1.1714	36.789	36.281	37.453	0.10306					78	34	3	0	0	0	0.88541	1	2048	2048		11.511	0.64546	1	384450	+		28744	21348	19217	19227	32736	32736					0.16398107244799576
LIVLLPEL	8	Unmodified	_LIVLLPEL_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.9420471191406	2	455.304604	908.594655	0.49832	0.00022689	-3.5397	-0.0016116	-3.0414	-0.0013848	455.3028771686855	71.785	0.64981	71.916	71.684	72.334	0.1301					40	24	2	0	0	0	0.4196	1	6590	6590		8.8223	7.2033	1	106710	+		28745	29599	19218	19228	32737	32737					0.1367019111917216
LIVLQIMGRIN	11	Unmodified	_LIVLQIMGRIN_					0	0	0			REV__nc|ENSG00000116117|Q8TEW8-6|PARD3B	REV__nc|ENSG00000116117|Q8TEW8-6|PARD3B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	635.3905639648438	2	635.389208	1268.76386	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.23	1	107.26	106.76	107.76	0.035622								0	0	0	0.56276	1	11767	11767		39.253	2.0937	1		+		28746	18178	19219	19229	32738	32738					0.14023144410248278
LIVLRQKLRL	10	Unmodified	_LIVLRQKLRL_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.379638671875	2	626.434807	1250.85506	1.3719	0.00085939	2.5586	0.0016028	3.9305	0.0024622	626.436177507759	105.85	0.16058	106.01	105.88	106.04	0.15924					5	3	2	0	0	0	0.37624	1	11292	11292		6.3127	0	1	67087	+		28747	18791	19220	19230	32739	32739					0.23966776169868353
LIVLSTNL	8	Unmodified	_LIVLSTNL_					0	0	0			REV__ENSG00000100991|ENST00000252015|TRPC4AP	REV__ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.77459716796875	2	436.776211	871.537869	0.90159	0.00039379	-3.9864	-0.0017412	-3.0848	-0.0013474	436.7743718767523	90.506	2.2468	90.957	90.49	92.737	0.45058					142	53	4	0	0	0	0.884	1	10717	10717		33.516	0	1	8766100	+		28748	17234	19221	19231	32740	32740					0.0969614356264401
LIVLVHELLD	10	Unmodified	_LIVLVHELLD_					0	0	0			REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.35400390625	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.84112	2	12238	12227;12238		37.159	14.579	1	3937500	+		28749	21784	19222	19232	32741;32742	32742					0.12132017751082458
LIVMRWKVN	9	Unmodified	_LIVMRWKVN_					0	0	0		ENSG00000185222|ENST00000372661|TCEAL9	ENSG00000185222|ENST00000372661|TCEAL9	ENSG00000185222|ENST00000372661|TCEAL9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	579.8439331054688	2	579.844436	1157.67432	-0.30572	-0.00017727	-0.7773	-0.00045071	-1.083	-0.00062798	579.8442285460155	102.54	1.4926	102.54	101.62	103.11	0					80	37	4	0	0	0	0.7932	1	10456	10456		23.042	1.0826	1	838830			28750	7690	19223	19233	32743	32743					0.10178934521536576
LIVMRWKVN	9	Unmodified	_LIVMRWKVN_					0	0	0		ENSG00000185222|ENST00000372661|TCEAL9	ENSG00000185222|ENST00000372661|TCEAL9	ENSG00000185222|ENST00000372661|TCEAL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.8442993164062	2	579.844436	1157.67432	-0.90191	-0.00052297	0.39612	0.00022969	-0.50579	-0.00029328	579.8446027793001	102.43	1.6108	102.45	102.08	103.69	0.01989					83	39	4	0	0	0	0.78058	1	10946	10946		30.504	6.2718	1	1265800			28751	7690	19223	19233	32744	32744					0.10178934521536576
LIVNKKKHL	9	Unmodified	_LIVNKKKHL_					0	0	0		nc|ENSG00000153292|Q5T601-2|ADGRF1;ENSG00000153292|ENST00000371253|ADGRF1	nc|ENSG00000153292|Q5T601-2|ADGRF1	nc|ENSG00000153292|Q5T601-2|ADGRF1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8399047851562	2	546.866226	1091.7179	-0.49642	-0.00027147	-3.9884	-0.0021811	-4.4848	-0.0024526	546.8627510338567	101.46	0.2881	101.46	101.24	101.53	0					8	6	2	0	0	0	0.20789	1	10299	10299		25.45	8.977	1	51496			28752	5229	19224	19234	32745	32745					0.17570867290305614
LIVNSFSTKVT	11	Unmodified	_LIVNSFSTKVT_					0	0	0		L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|43|3|sense	L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|43|3|sense	L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|43|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.8460693359375	2	604.847896	1207.68124	-1.2735	-0.00077028	-1.6629	-0.0010058	-2.9364	-0.0017761	604.84680283311	96.063	3.2734	96.265	95.11	98.383	0.20242					203	76	4	0	0	0	0.7144	1	9857	9857		29.17	3.1067	1	597870			28753	14535	19225	19235	32746	32746					0.08570525883101254
LIVPGQVV	8	Unmodified	_LIVPGQVV_					0	0	0		nc|ENSG00000179593|O15296-3|ALOX15B;ENSG00000179593|ENST00000380183|ALOX15B;ENST00000571240.1_1_17:7946036-7951880:+|nuORF	nc|ENSG00000179593|O15296-3|ALOX15B	nc|ENSG00000179593|O15296-3|ALOX15B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7669372558594	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.882	1	48.882	48.382	49.382	0.00016785								0	0	0	0.29319	1	4091	4091		31.579	1.0753	1				28754	7280	19226	19236	32747	32747					0.0979217825380374
LIVPLPRKW	9	Unmodified	_LIVPLPRKW_					0	0	0			REV__ENSG00000253598|ENST00000518568|SLC10A5	REV__ENSG00000253598|ENST00000518568|SLC10A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	561.36279296875	2	561.363319	1120.71209	-0.54951	-0.00030848	1.3579	0.00076227	0.80838	0.00045379	561.3639017095335	46.054	1.012	46.025	45.497	46.509	-0.028782					47	23	3	0	0	0	0.7932	2	3733	3733;3750		25.45	7.1258	1	192690	+		28755	23880	19227	19237	32748;32749	32748					0.15655768778628953
LIVPQKGNLLI	11	Unmodified	_LIVPQKGNLLI_					0	0	0		ENSG00000113924|ENST00000283871|HGD	ENSG00000113924|ENST00000283871|HGD	ENSG00000113924|ENST00000283871|HGD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3665161132812	2	604.392273	1206.76999	0.90458	0.00054672	-1.6314	-0.00098601	-0.72682	-0.00043928	604.39092325693	104.73	0.37125	104.84	104.78	105.15	0.10766					18	8	3	0	0	0	0.17643	1	11134	11134		14.137	2.6261	1	425770			28756	2753	19228	19238	32750	32750					0.17487985913430748
LIVPRGKFPIV	11	Unmodified	_LIVPRGKFPIV_					0	0	0			REV__chr1:173864506-173865471|15|84.8|0.26|8.33|-|2|GAS5,GAS5|1	REV__chr1:173864506-173865471|15|84.8|0.26|8.33|-|2|GAS5,GAS5|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2686767578125	3	413.604298	1237.79106	-1.9022	-0.00078676	3.7578	0.0015543	1.8556	0.0007675	413.60555121276786	39.822	0.46073	39.829	39.529	39.99	0.0065041					18	11	2	0	0	0	0.17537	1	2467	2467		20.03	0	1	54156	+		28757	15431	19229	19239	32751	32751					0.1816799601292587
LIVPTIMLLP	10	Unmodified	_LIVPTIMLLP_					0	0	0		ENSG00000198886|ENST00000361381|MT-ND4	ENSG00000198886|ENST00000361381|MT-ND4	ENSG00000198886|ENST00000361381|MT-ND4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3532104492188	2	555.353771	1108.69299	0.32258	0.00017915	-1.3315	-0.00073948	-1.009	-0.00056033	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.85438	1	10663	10663		16.473	0	1	7708500			28758	8358	19230	19240	32752	32752					0.14299051372722715
LIVPVRWAR	9	Unmodified	_LIVPVRWAR_					0	0	0			REV__ENST00000485732.5_1_9:139751390-139753468:+|nuORF	REV__ENST00000485732.5_1_9:139751390-139753468:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3533935546875	2	555.350743	1108.68693	0.32258	0.00017915	4.121	0.0022886	4.4436	0.0024677	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.7932	2	10568	10568;10639		18.324	1.7232	1	7708500	+		28759	27529	19231	19241	32753;32754	32753					0.13693713976067556
LIVPVRWAR	9	Unmodified	_LIVPVRWAR_					0	0	0			REV__ENST00000485732.5_1_9:139751390-139753468:+|nuORF	REV__ENST00000485732.5_1_9:139751390-139753468:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3533325195312	2	555.350743	1108.68693	0.85674	0.00047579	3.6725	0.0020395	4.5293	0.0025153	555.3526695275054	100.86	2.5278	101	100.46	102.99	0.14352					194	61	5	0	0	0	0.7932	1	10561	10561		17.365	1.7232	1	5097700	+		28760	27529	19231	19241	32755	32755					0.13693713976067556
LIVQPHSNLVL	11	Unmodified	_LIVQPHSNLVL_					0	0	0			REV__chr3:9964197-9965147|18|17.06|0.96|4.16|-|0|TE_info:AluJr,AluJr_dup13166,Alu,SINE,donor,+,9965147,9965415|EMC3,None|3	REV__chr3:9964197-9965147|18|17.06|0.96|4.16|-|0|TE_info:AluJr,AluJr_dup13166,Alu,SINE,donor,+,9965147,9965415|EMC3,None|3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.5840148925781	3	411.583562	1231.72886	1.5828	0.00065145	-0.12338	-5.078E-05	1.4594	0.00060067	411.5834556402397	21.313	1.331	20.869	20.477	21.808	-0.44324					86	30	5	0	0	0	0.64964	1	758	758		38.714	2.2673	1	766690	+		28761	15814	19232	19242	32756	32756					0.12226224873938918
LIVRDVPVRQG	11	Unmodified	_LIVRDVPVRQG_					0	0	0			REV__ENSG00000129566|ENST00000262715|TEP1	REV__ENSG00000129566|ENST00000262715|TEP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3816528320312	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.41	1	118.39	117.89	118.89	-0.024208								0	0	0	0.56276	1	13115	13115		19.104	6.2918	1		+		28762	18826	19233	19243	32757	32757					0.1305614547973164
LIVRDVPVRQG	11	Unmodified	_LIVRDVPVRQG_					0	0	0			REV__ENSG00000129566|ENST00000262715|TEP1	REV__ENSG00000129566|ENST00000262715|TEP1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3815307617188	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.87	1	119.78	119.28	120.28	-0.088509								0	0	0	0.56276	1	12953	12953		19.104	0.84144	1		+		28763	18826	19233	19243	32758	32758					0.1305614547973164
LIVREVAM	8	Unmodified	_LIVREVAM_					0	0	0		ENSG00000185504|ENST00000327787|FAAP100;nc|ENSG00000185504|Q0VG06-3|FAAP100;nc|ENSG00000185504|Q0VG06-2|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774353027344	2	465.775688	929.536823	0.52254	0.00024339	3.4867	0.001624	4.0093	0.0018674	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.87922	3	8210	8210;8337;8349		50.025	18.07	1	1330400			28764	7718	19234	19244	32759;32760;32761	32759					0.06923605922111165
LIVREVAM	8	Unmodified	_LIVREVAM_					0	0	0		ENSG00000185504|ENST00000327787|FAAP100;nc|ENSG00000185504|Q0VG06-3|FAAP100;nc|ENSG00000185504|Q0VG06-2|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774963378906	2	465.775688	929.536823	-0.087401	-4.0709E-05	4.1075	0.0019132	4.0201	0.0018725	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.92457	1	8252	8252		47.916	14.4	1	1330000			28765	7718	19234	19244	32762	32762					0.06923605922111165
LIVRKRNEQI	10	Unmodified	_LIVRKRNEQI_					0	0	0			REV__ENSG00000185274|ENST00000333538|GALNT17	REV__ENSG00000185274|ENST00000333538|GALNT17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8926391601562	2	634.893503	1267.77245	-0.13084	-8.307E-05	-1.4622	-0.00092832	-1.593	-0.0010114	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.67571	1	11433	11433		45.972	1.5951	1	40768000	+		28766	22756	19235	19245	32763	32763					0.14927834371087556
LIVRLSSS	8	Unmodified	_LIVRLSSS_					0	0	0		ENST00000586518.1_1_17:73774796-73774838:-|nuORF	ENST00000586518.1_1_17:73774796-73774838:-|nuORF	ENST00000586518.1_1_17:73774796-73774838:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7714538574219	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.82419	1	2971	2971		13.775	1.5685	1	9763800			28767	14169	19236	19246	32764	32764					0.08654375277149029
LIVRMGDA	8	Unmodified	_LIVRMGDA_					0	0	0			REV__nc|ENSG00000257335|O43451-1|MGAM	REV__nc|ENSG00000257335|O43451-1|MGAM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.7427673339844	2	437.744388	873.474223	-2.1575	-0.00094443	-1.2114	-0.00053027	-3.3689	-0.0014747	437.74373261776793	21.033	0.71996	21.033	20.717	21.437	0					57	33	2	0	0	0	0.87479	1	528	528		30.504	3.7075	1	50494	+		28768	23919	19237	19247	32765	32765					0.03242459853925084
LIVRMWYF	8	Unmodified	_LIVRMWYF_					0	0	0			REV__ENSG00000058262|ENST00000243253|SEC61A1;REV__nc|ENSG00000065665|Q9H9S3-2|SEC61A2	REV__ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.3101806640625	2	564.307155	1126.59976	0.17086	9.6419E-05	2.015	0.0011371	2.1858	0.0012335	564.3081374246972	75.153	0.67262	75.548	75.279	75.952	0.39507					37	15	3	0	0	0	0.89457	1	8506	8506		37.028	5.0736	1	1075700	+		28769	16434;29700	19238	19248	32766	32766					0.04152171710143193
LIVSFLLLM	9	Unmodified	_LIVSFLLLM_					0	0	0			REV__ENSG00000134389|ENST00000256785|CFHR5	REV__ENSG00000134389|ENST00000256785|CFHR5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8267822265625	2	524.827389	1047.64023	-1.5341	-0.00080515	0.58375	0.00030637	-0.95038	-0.00049879	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.7932	1	10555	10555		18.324	0	1	23918000	+		28770	19139	19239	19249	32767	32767					0.11831093309933749
LIVSNSASS	9	Unmodified	_LIVSNSASS_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2351379394531	2	439.234907	876.455261	1.5554	0.00068317	0.20119	8.8371E-05	1.7566	0.00077154	439.23488920789083	27.555	0.97632	27.3	27.034	28.01	-0.25465					49	22	4	0	0	0	0.78983	1	1633	1633		27.882	1.0861	1	767500			28771	2287	19240	19250	32768	32768					0.012092017638678954
LIVSSAVIE	9	Unmodified	_LIVSSAVIE_					0	0	0			REV__ENST00000562017.1_1_16:56643060-56643138:+|nuORF	REV__ENST00000562017.1_1_16:56643060-56643138:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.777587890625	2	465.778951	929.543348	-0.087401	-4.0709E-05	-2.8971	-0.0013494	-2.9845	-0.0013901	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.78058	1	8092	8092		30.504	0.18592	1	1330000	+		28772	28789	19241	19251	32769	32769					0.07575822354465345
LIVTRLAM	8	Unmodified	_LIVTRLAM_					0	0	0			REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	458.7877502441406	2	458.786056	915.557558	-1.0758	-0.00049355	4.3143	0.0019793	3.2385	0.0014858	458.7880145411106	93.372	3.7853	93.372	92.851	96.637	0					181	88	4	0	0	0	0.87922	4	9175	9175;9187;9199;9296		31.955	3.7006	1	6725700	+		28773	20162	19242	19252	32770;32771;32772;32773	32770					0.09640196301768356
LIVTRLAM	8	Unmodified	_LIVTRLAM_					0	0	0			REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	458.78741455078125	2	458.786056	915.557558	-0.12843	-5.8921E-05	3.1011	0.0014228	2.9727	0.0013638	458.7874632709064	93.167	2.7299	93.237	92.412	95.142	0.069862					206	64	5	0	0	0	0.87922	4	9640	9640;9652;9664;9700		40.573	7.057	1	16426000	+		28774	20162	19242	19252	32774;32775;32776;32777	32774					0.09640196301768356
LIVTRLAM	8	Unmodified	_LIVTRLAM_					0	0	0			REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.78753662109375	2	458.786056	915.557558	1.7438	0.00080003	1.1153	0.0005117	2.8591	0.0013117	458.7865715116249	93.096	4.333	93.035	92.463	96.796	-0.061432					233	102	5	0	0	0	0.84341	6	9941	9845;9881;9893;9917;9929;9941		37.159	2.5004	1	18947000	+		28775	20162	19242	19252	32778;32779;32780;32781;32782;32783	32783					0.09640196301768356
LIVTRLAM	8	Unmodified	_LIVTRLAM_					0	0	0			REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	458.7872009277344	2	458.786056	915.557558	0.80291	0.00036836	2.0876	0.00095776	2.8905	0.0013261	458.7870101504016	92.972	4.4564	93.018	92.411	96.867	0.045448					249	105	5	0	0	0	0.87922	7	9719	9719;9731;9743;9767;9817;9829;9841		31.955	6.5047	1	17992000	+		28776	20162	19242	19252	32784;32785;32786;32787;32788;32789;32790	32784					0.09640196301768356
LIVTRLAM	8	Unmodified	_LIVTRLAM_					0	0	0			REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7872009277344	2	458.786056	915.557558	-1.1208	-0.00051419	4.2526	0.001951	3.1318	0.0014368	458.7879776925229	92.908	3.5156	93.134	92.238	95.754	0.22548					221	84	5	0	0	0	0.87922	4	9425	9425;9498;9511;9643		33.516	6.5047	1	15931000	+		28777	20162	19242	19252	32791;32792;32793;32794	32791					0.09640196301768356
LIVTRLAM	8	Unmodified	_LIVTRLAM_					0	0	0			REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.7878112792969	2	458.786056	915.557558	0.69326	0.00031806	2.4281	0.001114	3.1213	0.001432	458.78715906372344	92.966	2.4091	93.125	92.453	94.862	0.15874					174	57	5	0	0	0	0.84341	8	9393	9393;9404;9416;9427;9439;9451;9463;9501		40.573	7.057	1	14401000	+		28778	20162	19242	19252	32795;32796;32797;32798;32799;32800;32801;32802	32795					0.09640196301768356
LIVTRLAM	8	Unmodified	_LIVTRLAM_					0	0	0			REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7875061035156	2	458.786056	915.557558	0.6747	0.00030954	3.1519	0.0014461	3.8266	0.0017556	458.78743118260775	92.703	1.6363	93.149	92.689	94.326	0.44662					124	39	4	0	0	0	0.87922	4	11021	11009;11021;11069;11081		45.952	7.057	1	5092100	+		28779	20162	19242	19252	32803;32804;32805;32806	32804					0.09640196301768356
LIVTRLAM	8	Unmodified	_LIVTRLAM_					0	0	0			REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7876892089844	2	458.786056	915.557558	-0.56464	-0.00025905	4.3311	0.001987	3.7664	0.001728	458.7879697200244	92.862	1.6326	93.312	92.732	94.365	0.44989					129	38	4	0	0	0	0.87922	4	11122	11122;11135;11159;11184		37.159	6.6555	1	6441800	+		28780	20162	19242	19252	32807;32808;32809;32810	32807					0.09640196301768356
LIVTVIQTHL	10	Unmodified	_LIVTVIQTHL_					0	0	0			REV__ENST00000591814.5_1_18:77227692-77227848:+|nuORF	REV__ENST00000591814.5_1_18:77227692-77227848:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.853515625	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.85251	1	10758	10758		19.997	0.89325	1	34546000	+		28781	29204	19243	19253	32811	32811					0.1340743747093711
LIVTYTVAY	9	Unmodified	_LIVTYTVAY_					0	0	0			REV__ENSG00000147138|ENST00000645147|GPR174	REV__ENSG00000147138|ENST00000645147|GPR174	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.7925415039062	2	521.794601	1041.57465	0.51766	0.00027011	-4.3612	-0.0022757	-3.8435	-0.0020055	521.7921709358651	78.532	0.84686	78.943	78.592	79.439	0.4106					40	19	3	0	0	0	0.69914	1	8960	8960		40.573	3.4135	1	718400	+		28782	20055	19244	19254	32812	32812					0.055523953885767696
LIVVILEN	8	Unmodified	_LIVVILEN_					0	0	0		nc|ENSG00000072041|Q9H2J7-3|SLC6A15;ENSG00000072041|ENST00000266682|SLC6A15	nc|ENSG00000072041|Q9H2J7-3|SLC6A15	nc|ENSG00000072041|Q9H2J7-3|SLC6A15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7911376953125	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.82464	1	3798	3798		21.702	2.3424	1	652510			28783	1266	19245	19255	32813	32813					0.10984716596760791
LIVVPSSLRY	10	Unmodified	_LIVVPSSLRY_					0	0	0		nc|ENSG00000121988|Q5FWF4-3|ZRANB3;ENSG00000121988|ENST00000264159|ZRANB3;nc|ENSG00000121988|Q5FWF4-5|ZRANB3;ENST00000492193.1_1_2:136111018-136262059:-|nuORF	nc|ENSG00000121988|Q5FWF4-3|ZRANB3	nc|ENSG00000121988|Q5FWF4-3|ZRANB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.8480224609375	2	573.847699	1145.68084	-1.0472	-0.00060094	1.2569	0.00072128	0.20971	0.00012034	573.8481909940142	84.091	0.73843	84.158	83.811	84.549	0.066933					36	16	3	0	0	0	0.51302	1	8377	8377		54.776	1.8396	1	244540			28784	3204	19246	19256	32814	32814					0.11383150953906807
LIVVQEKLN	9	Unmodified	_LIVVQEKLN_					0	0	0			REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.3306884765625	2	528.326599	1054.63865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.543	1	57.513	57.013	58.013	-0.029865								0	0	0	0.29273	1	5312	5312		40.778	5.1599	1		+		28785	29873	19247	19257	32815	32815					0.11351175545541992
LIVVTASY	8	Unmodified	_LIVVTASY_					0	0	0		nc|ENSG00000042832|P01266-2|TG;ENSG00000042832|ENST00000220616|TG	nc|ENSG00000042832|P01266-2|TG	nc|ENSG00000042832|P01266-2|TG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.25543212890625	2	433.255111	864.49567	2.3643	0.0010243	-3.0422	-0.001318	-0.67785	-0.00029368	433.254517852787	107.13	1.2704	107.16	106.63	107.9	0.035614					125	29	6	0	0	0	0.88915	1	11759	11759		35.201	0	1	67355000			28786	939	19248	19258	32816	32816					0.058001681542691585
LIVVTITTS	9	Unmodified	_LIVVTITTS_					0	0	0		ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.79315185546875	2	473.794601	945.574648	-1.0572	-0.0005009	-1.5139	-0.00071728	-2.5711	-0.0012182	473.793679724147	89.197	1.4239	89.197	88.751	90.174	0					63	32	3	0	0	0	0.72402	1	8631	8631		38.806	0	1	271460			28787	8689	19249	19259	32817	32817					0.09968395388557383
LIVVTITTS	9	Unmodified	_LIVVTITTS_					0	0	0		ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	473.794601	945.574648	-0.10621	-5.0322E-05	-2.5264	-0.001197	-2.6326	-0.0012473	473.7932210078017	89.08	1.7961	89.148	88.673	90.469	0.068161	0.083009	-0.00021823	NaN	38.806	85	41	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	479680			28788	8689	19249	19259							0.09968395388557383
LIVVTITTS	9	Unmodified	_LIVVTITTS_					0	0	0		ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	473.794601	945.574648	-0.18199	-8.6227E-05	-2.489	-0.0011793	-2.671	-0.0012655	473.79325426330604	88.888	1.49	88.938	88.433	89.923	0.050407	-0.12697	-0.00018282	NaN	38.806	84	34	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	503710			28789	8689	19249	19259							0.09968395388557383
LIVVTITTS	9	Unmodified	_LIVVTITTS_					0	0	0		ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	473.794601	945.574648	-0.90661	-0.00042955	-1.8661	-0.00088416	-2.7727	-0.0013137	473.7935811689232	88.742	1.3999	88.949	88.549	89.948	0.20731	-0.11568	0.00040738	NaN	38.806	73	32	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	337240			28790	8689	19249	19259							0.09968395388557383
LIVVTITTS	9	Unmodified	_LIVVTITTS_					0	0	0		ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	473.794601	945.574648	-1.7003	-0.0008056	-0.95566	-0.00045279	-2.656	-0.0012584	473.7939652736304	88.815	1.2002	88.987	88.577	89.778	0.17233	-0.077803	0.0012701	NaN	38.806	55	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	249200			28791	8689	19249	19259							0.09968395388557383
LIVVTITTS	9	Unmodified	_LIVVTITTS_					0	0	0		ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	473.794601	945.574648	0.8836	0.00041864	-3.4401	-0.0016299	-2.5565	-0.0012113	473.79281935813117	88.743	0.97734	89.191	88.713	89.691	0.44893	0.12652	-0.0010841	NaN	38.806	37	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	239290			28792	8689	19249	19259							0.09968395388557383
LIVVTITTS	9	Unmodified	_LIVVTITTS_					0	0	0		ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	473.794601	945.574648	-2.0814	-0.00098615	-0.46441	-0.00022003	-2.5458	-0.0012062	473.79417149704796	88.764	1.0478	89.235	88.797	89.845	0.47068	0.16983	0.0017356	NaN	38.806	46	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	350540			28793	8689	19249	19259							0.09968395388557383
LIVVVCGALYA	11	Unmodified	_LIVVVCGALYA_					0	0	0			REV__nc|ENSG00000075702|O43379|WDR62	REV__nc|ENSG00000075702|O43379|WDR62	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.2689208984375	2	560.825378	1119.6362	0.46396	0.0002602	0.51093	0.00028654	0.97489	0.00054674	560.8255892783661	51.189	0.64717	51.196	50.944	51.591	0.0077438					26	16	2	0	0	0	0.17277	1	4370	4370		17.365	0	1	212590	+		28794	16717	19250	19260	32818	32818					0.08117003816232682
LIVVVCGALYA	11	Unmodified	_LIVVVCGALYA_					0	0	0			REV__nc|ENSG00000075702|O43379|WDR62	REV__nc|ENSG00000075702|O43379|WDR62	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	560.825378	1119.6362	-1.1588	-0.00064991	2.1228	0.0011905	0.96394	0.0005406	560.8264162568051	50.908	0.56271	50.908	50.657	51.219	0	-0.11081	0.0011583	NaN	11.511	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178230	+		28795	16717	19250	19260							0.08117003816232682
LIVVVHEGPL	10	Unmodified	_LIVVVHEGPL_					0	0	0			REV__ENST00000261643.7_1_17:14110564-14110621:+|nuORF	REV__ENST00000261643.7_1_17:14110564-14110621:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3264770507812	2	538.329142	1074.64373	-1.4902	-0.00080221	-1.9181	-0.0010325	-3.4082	-0.0018348	538.3278910596479	113.16	0.20975	113.13	113.01	113.22	-0.032333					11	5	3	0	0	0	0.86589	1	12078	12078		29.15	1.2673	1	2647400	+		28796	24399	19251	19261	32819	32819					0.10939479408125408
LIVVVHEGPL	10	Unmodified	_LIVVVHEGPL_					0	0	0			REV__ENST00000261643.7_1_17:14110564-14110621:+|nuORF	REV__ENST00000261643.7_1_17:14110564-14110621:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	538.329142	1074.64373	-1.4902	-0.00080221	-1.9181	-0.0010325	-3.4082	-0.0018348	538.3278910596479	113.16	0.20975	113.13	113.01	113.22	-0.032333	0	0	NaN	29.15	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2647400	+		28797	24399	19251	19261							0.10939479408125408
LIWEILVSWFL	11	Unmodified	_LIWEILVSWFL_					0	0	0		ENSG00000212128|ENST00000390677|TAS2R13	ENSG00000212128|ENST00000390677|TAS2R13	ENSG00000212128|ENST00000390677|TAS2R13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.608154296875	3	473.607596	1417.80096	-0.55002	-0.00026049	2.5977	0.0012303	2.0477	0.00096981	473.6087143992069	17.201	0.45014	16.59	16.348	16.798	-0.6107					18	9	3	0	0	0	0.75544	1	241	241		20.837	0	1	160270			28798	8571	19252	19262	32820	32820					0.1087713922763669
LIWFPLIVLR	10	Unmodified	_LIWFPLIVLR_					0	0	0			REV__ENST00000482825.7_1_1:150936938-150939392:-|nuORF	REV__ENST00000482825.7_1_1:150936938-150939392:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	635.4074096679688	2	635.407727	1268.8009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.713	1	15.761	15.261	16.261	0.047803								0	0	0	0.45132	1	74	74		24.203	0.68005	1		+		28799	19808	19253	19263	32821	32821					0.177251840182862
LIWGKFVLY	9	Unmodified	_LIWGKFVLY_					0	0	0		nc|ENSG00000111684|Q6P1A2-2|LPCAT3;ENSG00000111684|ENST00000261407|LPCAT3	nc|ENSG00000111684|Q6P1A2-2|LPCAT3	nc|ENSG00000111684|Q6P1A2-2|LPCAT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.83349609375	2	569.836603	1137.65865	-1.0806	-0.00061575	-2.6638	-0.0015179	-3.7443	-0.0021337	569.8350224591633	57.613	1.7855	58.007	57.535	59.32	0.39407					132	43	5	0	0	0	0.64338	1	6044	6044		44.531	0.15388	1	13933000			28800	2603	19254	19264	32822	32822					0.09532971276121316
LIWHDETLL	9	Unmodified	_LIWHDETLL_					0	0	0			REV__ENST00000372886.5_1_20:43211320-43218439:+|nuORF	REV__ENST00000372886.5_1_20:43211320-43218439:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.839599609375	2	570.308406	1138.60226	1.4562	0.00083046	-2.1786	-0.0012425	-0.72246	-0.00041203	570.8093441662096	50.295	0.24032	51.14	51.055	51.295	0.84501					6	5	2	0	0	0	0.20789	1	4955	4955		33.516	0	1	69357	+		28801	25737	19255	19265	32823	32823					0.03850298648808348
LIWKLRLEKS	10	Unmodified	_LIWKLRLEKS_					0	0	0		ENST00000424881.5_3_7:99158252-99169400:+|nuORF	ENST00000424881.5_3_7:99158252-99169400:+|nuORF	ENST00000424881.5_3_7:99158252-99169400:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4058837890625	2	643.403173	1284.79179	1.6039	0.001032	2.8597	0.0018399	4.4636	0.0028719	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.86218	1	11240	11240		32.812	0.061884	1	21138000			28802	11522	19256	19266	32824	32824					0.16078790661981657
LIWLPLLSRT	10	Unmodified	_LIWLPLLSRT_					0	0	0			REV__chr2:187560873-187565550|14|20.43|0.0|20.96|-|0|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|23	REV__chr2:187560873-187565550|14|20.43|0.0|20.96|-|0|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.9214172363281	3	404.588536	1210.74378	-1.2934	-0.00052329	2.0722	0.00083838	0.77879	0.00031509	404.5892229323439	41.136	1.2646	41.095	40.508	41.772	-0.04081					80	34	3	0	0	0	0.85086	1	3054	3054		19.263	4.569	1	339150	+		28803	15740	19257	19267	32825	32825					0.14683716741933495
LIWLPVFVVLW	11	Unmodified	_LIWLPVFVVLW_					0	0	0			REV__ENSG00000226479|ENST00000426077|TMEM185B	REV__ENSG00000226479|ENST00000426077|TMEM185B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.9484558105469	3	462.284565	1383.83187	-1.0551	-0.00048777	-3.921	-0.0018126	-4.9761	-0.0023004	462.6170093968964	107.7	0.78902	107.84	107.24	108.03	0.13866					68	19	6	0	0	0	0.17754	1	11533	11533		15.333	0	1	62219000	+		28804	23745	19258	19268	32826	32826					0.15530337332552335
LIWPRPGG	8	Unmodified	_LIWPRPGG_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210;REV__nc|ENSG00000143552|Q5VU65-2|NUP210L	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.25836181640625	2	448.261062	894.507572	-0.14446	-6.4758E-05	-4.2654	-0.001912	-4.4099	-0.0019768	448.2590229245312	90.101	3.0472	90.17	88.225	91.272	0.068695					215	72	5	0	0	0	0.89457	1	9301	9301		37.028	15.069	1	2722700	+		28805	18987;19821	19259	19269	32827	32827					0.056098296881373244
LIYCWAHSGGG	11	Unmodified	_LIYCWAHSGGG_					0	0	0			REV__ENST00000442176.1_1_7:15734921-15734990:+|nuORF	REV__ENST00000442176.1_1_7:15734921-15734990:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3544311523438	2	582.268758	1162.52296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.62	1	114.69	114.19	115.19	0.061073								0	0	0	0.56276	1	12253	12253		27.882	3.3631	1		+		28806	26768	19260	19270	32828	32828					-0.05179671577002409
LIYGHTQH	8	Unmodified	_LIYGHTQH_					0	0	0		ENST00000229955.3_1_6:97246777-97247002:-|nuORF	ENST00000229955.3_1_6:97246777-97247002:-|nuORF	ENST00000229955.3_1_6:97246777-97247002:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.9963684082031	2	484.751059	967.487565	-0.083473	-4.0464E-05	-0.89432	-0.00043352	-0.97779	-0.00047398	484.7503564645266	70.179	0.90082	70.564	70.225	71.126	0.38416					42	21	3	0	0	0	0.4196	1	7819	7819		21.702	0	1	558420			28807	9212	19261	19271	32829	32829					0.0025203395750850177
LIYIIYFRLLF	11	Unmodified	_LIYIIYFRLLF_					0	0	0		ENST00000370790.5_1_X:133903760-133903853:-|nuORF	ENST00000370790.5_1_X:133903760-133903853:-|nuORF	ENST00000370790.5_1_X:133903760-133903853:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2992248535156	3	491.967125	1472.87954	2.8449	0.0013996	-1.7827	-0.00087702	1.0622	0.00052255	491.966273447991	117.56	0.67574	117.54	117.25	117.92	-0.02433					34	22	2	0	0	0	0.17754	1	13046	13046		20.837	8.9048	1	73684			28808	10648	19262	19272	32830	32830					0.1620199153271642
LIYIPDSVTL	10	Unmodified	_LIYIPDSVTL_					0	0	0			REV__nc|ENSG00000155463|Q15070-2|OXA1L	REV__nc|ENSG00000155463|Q15070-2|OXA1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.329833984375	2	567.326265	1132.63798	1.8589	0.0010546	4.3547	0.0024705	6.2136	0.0035251	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86452	1	9802	9802		30.504	0.18592	1	15439000	+		28809	20430	19263	19273	32831	32831					0.07696336105800583
LIYKAKPKD	9	Unmodified	_LIYKAKPKD_					0	0	0		nc|ENSG00000168297|Q7Z7A4-7|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-3|PXK;nc|ENSG00000168297|Q7Z7A4-5|PXK	nc|ENSG00000168297|Q7Z7A4-7|PXK	nc|ENSG00000168297|Q7Z7A4-7|PXK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3274536132812	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12382	12382		19.36	0.25645	1	4041000			28810	6389	19264	19274	32832	32832					0.10939479408125408
LIYRILPSNGD	11	Unmodified	_LIYRILPSNGD_					0	0	0			REV__nc|ENSG00000069188|Q58EX2-2|SDK2	REV__nc|ENSG00000069188|Q58EX2-2|SDK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	630.8497314453125	2	630.85097	1259.68739	1.1522	0.00072686	-3.1032	-0.0019577	-1.951	-0.0012308	630.848836753028	110.73	1.3896	110.76	110.4	111.79	0.031746					141	46	4	0	0	0	0.74763	1	12170	12170		22.58	1.6327	1	700180	+		28811	16576	19265	19275	32833	32833					0.06793044114624536
LIYRIVPAS	9	Unmodified	_LIYRIVPAS_					0	0	0		ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.316035	1030.61752	-0.63969	-0.00033028	-3.0425	-0.0015709	-3.6822	-0.0019012	516.3144152653146	102.55	1.0925	102.55	101.98	103.08	0					67	27	3	0	0	0	0.77546	1	10426	10426		31.955	0.42505	1	640710			28812	6877	19266	19276	32834	32834					0.10343210236646883
LIYRIVPAS	9	Unmodified	_LIYRIVPAS_					0	0	0		ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3128051757812	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12430	12430		25.45	4.5032	1	4038100			28813	6877	19266	19276	32835	32835					0.10343210236646883
LIYRLQQVLFW	11	Unmodified	_LIYRLQQVLFW_					0	0	0			REV__ENSG00000108733|ENST00000225873|PEX12	REV__ENSG00000108733|ENST00000225873|PEX12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.9560852050781	3	493.622128	1477.84456	-1.8007	-0.00088885	-0.44364	-0.00021899	-2.2443	-0.0011078	493.6218802691259	31.167	0.9176	31.167	30.72	31.638	0					75	31	3	0	0	0	0.76579	1	1462	1462		18.531	3.8374	1	50794	+		28814	17728	19267	19277	32836	32836					0.12474748724775964
LIYRWTKSLD	10	Unmodified	_LIYRWTKSLD_					0	0	0		ENSG00000165684|ENST00000684778|SNAPC4	ENSG00000165684|ENST00000684778|SNAPC4	ENSG00000165684|ENST00000684778|SNAPC4	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	647.864013671875	2	647.861338	1293.70812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.09	1	119.18	118.68	119.68	0.087753								0	0	0	0.45132	1	12538	12538		21.96	1.013	1				28815	6110	19268	19278	32837	32837					0.0730163449425163
LIYTLFMNKH	10	Unmodified	_LIYTLFMNKH_					0	0	0			REV__nc|ENSG00000004948|P30988-5|CALCR	REV__nc|ENSG00000004948|P30988-5|CALCR	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3453369140625	2	640.347009	1278.67946	0.023456	1.502E-05	-0.25789	-0.00016514	-0.23444	-0.00015012	640.3467925312829	103.68	0.57704	103.68	103.38	103.96	0					38	13	4	0	0	0	0.37624	1	10609	10609		26.693	12.556	1	848260	+		28816	16070	19269	19279	32838	32838					0.0512719359348921
LIYTLRNKKV	10	Unmodified	_LIYTLRNKKV_					0	0	0		ENSG00000237988|ENST00000641137|OR2I1P;nc|ENSG00000237988|Q8NGU4|OR2I1P	ENSG00000237988|ENST00000641137|OR2I1P	ENSG00000237988|ENST00000641137|OR2I1P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.60101318359375	3	416.599324	1246.77614	-0.044192	-1.841E-05	3.601	0.0015002	3.5568	0.0014818	416.6007283221712	76.486	0.69119	77.055	76.725	77.417	0.56836					45	22	3	0	0	0	0.66675	1	8702	8702		46.457	1.4346	1	703110			28817	8763	19270	19280	32839	32839					0.16262504144924605
LIYVLYKQRMT	11	Unmodified	_LIYVLYKQRMT_					0	0	0		ENST00000285873.7_1_5:154305630-154308090:-|nuORF	ENST00000285873.7_1_5:154305630-154308090:-|nuORF	ENST00000285873.7_1_5:154305630-154308090:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.60467529296875	3	476.607491	1426.80064	0.6944	0.00033095	-2.9742	-0.0014175	-2.2798	-0.0010866	476.60607930302524	16.041	0.22489	16.017	15.915	16.14	-0.024035					19	9	3	0	0	0	0.74022	1	101	101		24.232	4.9691	1	184500			28818	9652	19271	19281	32840	32840					0.10431396236117507
LIYYLGVLDS	10	Unmodified	_LIYYLGVLDS_					0	0	0		ENST00000460571.1_1_1:95711973-95712171:+|nuORF	ENST00000460571.1_1_1:95711973-95712171:+|nuORF	ENST00000460571.1_1_1:95711973-95712171:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	578.3201293945312	2	578.31844	1154.62233	1.9905	0.0011511	1.6628	0.0009616	3.6532	0.0021127	578.3195520313913	92.681	2.7022	92.617	91.521	94.223	-0.06414					158	63	3	0	0	0	0.86452	1	9805	9805		30.504	0	1	468330			28819	12009	19272	19282	32841	32841					0.05120049588776965
LKAAKKGK	8	Unmodified	_LKAAKKGK_					0	0	0		nc|ENSG00000164323|Q9P2B7-2|CFAP97;ENSG00000164323|ENST00000458385|CFAP97	nc|ENSG00000164323|Q9P2B7-2|CFAP97	nc|ENSG00000164323|Q9P2B7-2|CFAP97	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.3375549316406	2	422.292362	842.570172	-0.23451	-9.9031E-05	2.6475	0.001118	2.413	0.001019	422.2935830728707	71.277	0.91533	71.661	71.084	71.999	0.38449					27	21	2	0	0	0	0.4196	1	7911	7911		7.6903	0	1	64222			28820	5955	19273	19283	32842	32842					0.1425897575632007
LKAATFAF	8	Unmodified	_LKAATFAF_					0	0	0			REV__nc|ENSG00000134030|O43310-2|CTIF	REV__nc|ENSG00000134030|O43310-2|CTIF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7801513671875	2	434.749996	867.485439	-1.645	-0.00071518	0.74618	0.0003244	-0.89886	-0.00039078	434.75074912387413	39.648	0.21789	39.655	39.495	39.712	0.0065002					6	5	2	0	0	0	0.4196	1	2448	2448		31.955	0	1	26489	+		28821	29855	19274	19284	32843	32843					0.04639605219699661
LKAATIWIHR	10	Unmodified	_LKAATIWIHR_					0	0	0			REV__ENSG00000101161|ENST00000266079|PRPF6	REV__ENSG00000101161|ENST00000266079|PRPF6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.871826171875	2	604.866757	1207.71896	3.2	0.0019356	0.13298	8.0437E-05	3.333	0.002016	604.8668313770175	117.51	0.42224	117.48	117.29	117.71	-0.02433					16	12	2	0	0	0	0.85251	1	13007	13007		19.997	0	1	52655	+		28822	17246	19275	19285	32844	32844					0.12341081659201336
LKACIKHIA	9	Unmodified	_LKACIKHIA_					0	0	0			REV__nc|ENSG00000108423|Q9UJT1-6|TUBD1	REV__nc|ENSG00000108423|Q9UJT1-6|TUBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.80413818359375	2	498.80478	995.595007	-0.60409	-0.00030132	-1.5516	-0.00077395	-2.1557	-0.0010753	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.78058	2	4112	4112;4188		30.504	8.8013	1	2424700	+		28823	17710	19276	19286	32845;32846	32845					0.09703287567378993
LKACIKHIA	9	Unmodified	_LKACIKHIA_					0	0	0			REV__nc|ENSG00000108423|Q9UJT1-6|TUBD1	REV__nc|ENSG00000108423|Q9UJT1-6|TUBD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.80303955078125	2	498.80478	995.595007	0.57568	0.00028715	-2.7255	-0.0013595	-2.1498	-0.0010723	498.80326110747177	49.369	1.5492	50.214	49.828	51.377	0.84501					106	37	4	0	0	0	0.7932	1	4825	4825		23.042	2.5607	1	6182600	+		28824	17710	19276	19286	32847	32847					0.09703287567378993
LKADLGPNYRI	11	Unmodified	_LKADLGPNYRI_					0	0	0			REV__ENSG00000170426|ENST00000293502|SDR9C7	REV__ENSG00000170426|ENST00000293502|SDR9C7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.575439453125	3	420.575067	1258.70337	-1.8483	-0.00077734	2.5733	0.0010823	0.72501	0.00030492	420.57607565100795	46.864	0.92207	46.883	46.533	47.455	0.018967					71	25	5	0	0	0	0.72892	1	3500	3500		26.75	1.6237	1	1392800	+		28825	21660	19277	19287	32848	32848					0.08436750351506817
LKAGPFPL	8	Unmodified	_LKAGPFPL_					0	0	0			REV__ENSG00000179774|ENST00000373673|ATOH7	REV__ENSG00000179774|ENST00000373673|ATOH7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.8059387207031	2	421.760364	841.506175	0.28213	0.00011899	-4.053	-0.0017094	-3.7708	-0.0015904	421.7583401069659	18.915	0.33667	18.286	18.107	18.444	-0.62961					10	7	2	0	0	0	0.4196	1	462	462		14.664	3.1531	1	14826	+		28826	22353	19278	19288	32849	32849					0.07908195599372903
LKAHLRTHTG	10	Unmodified	_LKAHLRTHTG_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF;ENSG00000127528|ENST00000248071|KLF2;nc|ENSG00000102554|Q13887-2|KLF5;ENSG00000105610|ENST00000264834|KLF1;nc|ENSG00000102554|Q13887-4|KLF5;ENSG00000102554|ENST00000377687|KLF5;nc|ENSG00000172059|O14901-2|KLF11;ENSG00000172059|ENST00000305883|KLF11;ENSG00000169926|ENST00000307145|KLF13	nc|ENSG00000136826|O43474|KLF4;ENSG00000169926|ENST00000307145|KLF13	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.330322265625	2	567.330539	1132.64652	1.8589	0.0010546	-3.1789	-0.0018035	-1.32	-0.00074889	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86763	1	9706	9706		26.693	0	1	15439000			28827	14941;6543	19279	19289	32850	32850					0.08550747585650242
LKAIELPK	8	Unmodified	_LKAIELPK_					0	0	0			REV__nc|ENSG00000198862|O94822-3|LTN1	REV__nc|ENSG00000198862|O94822-3|LTN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3002014160156	2	456.299853	910.585153	-1.2392	-0.00056545	3.8454	0.0017547	2.6062	0.0011892	456.3014948011369	49.504	1.4145	49.529	48.8	50.214	0.025578					54	35	2	0	0	0	0.86677	1	3801	3801		27.882	0	1	127180	+		28828	23401	19280	19290	32851	32851					0.1262842283366581
LKAIWKIEHT	10	Unmodified	_LKAIWKIEHT_					0	0	0			REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8690795898438	2	619.866423	1237.71829	0.5439	0.00033715	4.1993	0.002603	4.7432	0.0029401	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.86218	1	11288	11288		32.812	1.2826	1	1280900	+		28829	22001	19281	19291	32852	32852					0.10894242219478656
LKAKGRRSTF	10	Unmodified	_LKAKGRRSTF_					0	0	0		nc|ENSG00000179397|Q5SY80-3|CATSPERE;nc|ENSG00000179397|Q5SY80-2|CATSPERE;ENSG00000179397|ENST00000366534|CATSPERE	nc|ENSG00000179397|Q5SY80-3|CATSPERE	nc|ENSG00000179397|Q5SY80-3|CATSPERE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3536987304688	2	582.354014	1162.69348	-1.3468	-0.00078429	0.41376	0.00024096	-0.93299	-0.00054333	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.86763	1	11315	11315		26.693	0	1	120000000			28830	7268	19282	19292	32853	32853					0.11863607136797327
LKALFLKGCTQ	11	Unmodified	_LKALFLKGCTQ_					0	0	0		nc|ENSG00000108306|Q96IG2-2|FBXL20;ENSG00000108306|ENST00000264658|FBXL20	nc|ENSG00000108306|Q96IG2-2|FBXL20	nc|ENSG00000108306|Q96IG2-2|FBXL20	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3538208007812	2	611.354834	1220.69511	-0.22744	-0.00013904	3.0108	0.0018407	2.7834	0.0017016	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.72106	1	9628	9628		28.081	2.5074	1	8715400			28831	2397	19283	19293	32854	32854					0.09359480110538243
LKALKTARLQP	11	Unmodified	_LKALKTARLQP_					0	0	0		ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7671813964844	3	413.602957	1237.78704	0.99913	0.00041324	2.979	0.0012321	3.9781	0.0016454	413.60413529181835	39.927	0.71925	39.937	39.601	40.32	0.0092773					24	16	2	0	0	0	0.17437	1	2840	2840		15.337	0	1	48208			28832	2876	19284	19294	32855	32855					0.17765906519230157
LKAMALLKLNP	11	Unmodified	_LKAMALLKLNP_					0	0	0			REV__nc|ENSG00000101343|Q9BZJ0-3|CRNKL1	REV__nc|ENSG00000101343|Q9BZJ0-3|CRNKL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5890808105469	3	404.58966	1210.74715	0.88743	0.00035905	-2.0096	-0.00081307	-1.1222	-0.00045403	404.58872084181826	39.368	1.6571	39.379	38.582	40.239	0.011173					116	38	4	0	0	0	0.72374	2	2750	2733;2750		27.644	5.8635	1	391440	+		28833	29745	19285	19295	32856;32857	32857					0.15020643524303523
LKAQTQLRLH	10	Unmodified	_LKAQTQLRLH_					0	0	0			REV__ENSG00000118420|ENST00000369747|UBE3D	REV__ENSG00000118420|ENST00000369747|UBE3D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2470703125	3	403.247173	1206.71969	0.73411	0.00029603	-1.4803	-0.00059692	-0.74617	-0.00030089	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.86763	1	11159	11159		25.126	0	1	18617000	+		28834	18309	19286	19296	32858	32858					0.12459876308275852
LKASGKNKH	9	Unmodified	_LKASGKNKH_					0	0	0		ENSG00000071051|ENST00000233154|NCK2	ENSG00000071051|ENST00000233154|NCK2	ENSG00000071051|ENST00000233154|NCK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.2984619140625	2	491.793258	981.571963	0.42504	0.00020903	4.4189	0.0021732	4.8439	0.0023822	491.7954861357076	59.345	2.1315	59.459	58.989	61.12	0.11396					113	74	3	0	0	0	0.78124	1	5119	5119		30.318	3.6248	1	139720			28835	1254	19287	19297	32859	32859					0.08043984774269575
LKAVAIVV	8	Unmodified	_LKAVAIVV_					0	0	0		ENSG00000175485|ENST00000311352|OR52W1	ENSG00000175485|ENST00000311352|OR52W1	ENSG00000175485|ENST00000311352|OR52W1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78472900390625	2	406.783839	811.553125	2.7329	0.0011117	1.0571	0.00043001	3.79	0.0015417	406.7841375125675	29.651	1.9122	29.636	28.895	30.807	-0.015167					147	57	4	0	0	0	0.82464	1	1579	1579		21.702	1.2205	1	914260			28836	7020	19288	19298	32860	32860					0.13981055150509292
LKAVKSST	8	Unmodified	_LKAVKSST_					0	0	0		nc|ENSG00000105664|P49747-2|COMP;CON__ENSEMBL:ENSBTAP00000006074;ENSG00000105664|ENST00000222271|COMP	nc|ENSG00000105664|P49747-2|COMP	nc|ENSG00000105664|P49747-2|COMP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.2585144042969	2	417.258185	832.501818	0.73077	0.00030492	0.058378	2.4359E-05	0.78915	0.00032928	417.25810331191536	21.663	2.6932	21.727	21.148	23.842	0.064745					160	99	2	0	0	0	0.83646	1	637	637		12.207	0.69583	1	105380		+	28837	561	19289	19299	32861	32861					0.07886686385825215
LKAVRPTSPPQ	11	Unmodified	_LKAVRPTSPPQ_					0	0	0		ENSG00000130950|ENST00000253262|NUTM2F;ENSG00000188152|ENST00000372322|NUTM2G	ENSG00000130950|ENST00000253262|NUTM2F	ENSG00000130950|ENST00000253262|NUTM2F	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3565673828125	2	597.35368	1192.69281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.137	1	95.57	95.07	96.07	0.4324								0	0	0	0.56276	1	11372	11372		30.318	3.6248	1				28838	3700	19290	19300	32862	32862					0.10416767697097384
LKCFRNCLR	9	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))LKC(Carbamidomethyl (C))FRNCLR_	LKC(0.992)FRNC(0.008)LR		LKC(21)FRNC(-21)LR		1	1	0		ENSG00000175449|ENST00000380005|RFESD	ENSG00000175449|ENST00000380005|RFESD	ENSG00000175449|ENST00000380005|RFESD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.326416015625	2	626.326085	1250.63762	-0.062907	-3.94E-05	2.5757	0.0016133	2.5128	0.0015739	626.3275040017871	53.127	1.167	53.144	52.533	53.7	0.017487					73	31	3	0	0	0	0.64922	1	4659	4659		44.117	9.9443	2	169450			28839	7017	19291	19301	32863	32863	89				0.02232314633306487
LKCGAKRA	8	Unmodified	_LKCGAKRA_					0	0	0			REV__ENSG00000142619|ENST00000375460|PADI3	REV__ENSG00000142619|ENST00000375460|PADI3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.30584716796875	2	423.752547	845.490542	0.4726	0.00020027	1.6908	0.0007165	2.1634	0.00091676	423.75192152075306	25.861	0.14993	25.906	25.854	26.004	0.045507					6	4	2	0	0	0	0.4196	1	1054	1054		3.9852	0	1	6683.8	+		28840	19748	19292	19302	32864	32864					0.06161585810662018
LKCKGAPK	8	Unmodified	_LKCKGAPK_					0	0	0		nc|ENSG00000204305|Q15109-9|AGER;nc|ENSG00000204305|Q15109-5|AGER;nc|ENSG00000204305|Q15109-8|AGER;nc|ENSG00000204305|Q15109-2|AGER;nc|ENSG00000204305|Q15109-3|AGER;nc|ENSG00000204305|Q15109-4|AGER;nc|ENSG00000204305|Q15109-10|AGER;nc|ENSG00000204305|Q15109-7|AGER;ENSG00000204305|ENST00000375076|AGER;nc|ENSG00000204305|Q15109-6|AGER	nc|ENSG00000204305|Q15109-9|AGER	nc|ENSG00000204305|Q15109-9|AGER	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.75567626953125	2	422.757298	843.500044	-0.74002	-0.00031285	-2.822	-0.001193	-3.562	-0.0015059	422.75593991539887	57.593	1.04	57.987	57.655	58.695	0.39407					58	25	3	0	0	0	0.91977	1	6003	6003		45.952	3.4775	1	2287500			28841	15208	19293	19303	32865	32865					0.07203354096191106
LKCKLVRP	8	Unmodified	_LKCKLVRP_					0	0	0			REV__nc|ENSG00000275763|Q6ZTR6|ZNF516-DT	REV__nc|ENSG00000275763|Q6ZTR6|ZNF516-DT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8058166503906	2	478.807322	955.600092	-0.92451	-0.00044266	-1.2507	-0.00059887	-2.1753	-0.0010415	478.80664804898805	39.433	1.9403	39.444	38.3	40.24	0.010708					89	52	2	0	0	0	0.80706	1	2456	2456		19.36	0	1	287670	+		28842	30267	19294	19304	32866	32866					0.12051591429997188
LKCLEVKRKFA	11	Unmodified	_LKCLEVKRKFA_					0	0	0		ENST00000414766.5_3_2:179506972-179538410:-|nuORF	ENST00000414766.5_3_2:179506972-179538410:-|nuORF	ENST00000414766.5_3_2:179506972-179538410:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.6359558105469	3	445.60408	1333.79041	0.1588	7.0763E-05	-0.19267	-8.5854E-05	-0.033867	-1.5091E-05	445.9384852462182	37.857	0.15316	38.379	38.32	38.473	0.52235					7	3	3	0	0	0	0.17437	1	3104	3104		15.337	0	1	101360			28843	11372	19295	19305	32867	32867					0.13686833301562729
LKCQRQRH	8	Unmodified	_LKCQRQRH_					0	0	0			REV__ENSG00000132153|ENST00000445061|DHX30	REV__ENSG00000132153|ENST00000445061|DHX30	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.7952880859375	2	534.795809	1067.57707	-1.6021	-0.00085681	0.94994	0.00050802	-0.65218	-0.00034878	534.7961451235103	29.642	3.4749	29.642	28.953	32.428	0					302	131	4	0	0	0	0.91005	1	1331	1331		42.474	3.2216	1	542890	+		28844	18984	19296	19306	32868	32868					0.04597965365246637
LKCYRHRL	8	Unmodified	_LKCYRHRL_					0	0	0			REV__ENST00000257552.6_1_12:120779899-120780196:-|nuORF	REV__ENST00000257552.6_1_12:120779899-120780196:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.494140625	2	544.810928	1087.6073	-2.5333	-0.0013802	-2.7778	-0.0015134	-5.3111	-0.0028936	545.3110424156264	41.918	0.18723	42.332	42.163	42.351	0.4139					7	4	2	0	0	0	0.4196	1	3681	3681		33.516	8.9964	1	172710	+		28845	24342	19297	19307	32869	32869					0.06700324030430238
LKDALILLG	9	Unmodified	_LKDALILLG_					0	0	0			REV__ENSG00000213420|ENST00000292377|GPC2	REV__ENSG00000213420|ENST00000292377|GPC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.3138732910156	2	478.312961	954.611368	0.12122	5.7983E-05	2.5739	0.0012311	2.6951	0.0012891	478.3140484852852	36.894	1.4484	36.834	36.308	37.756	-0.060337					63	44	2	0	0	0	0.7932	1	2033	2033		20.947	3.582	1	89529	+		28846	23616	19298	19308	32870	32870					0.13224692005144334
LKDALILLG	9	Unmodified	_LKDALILLG_					0	0	0			REV__ENSG00000213420|ENST00000292377|GPC2	REV__ENSG00000213420|ENST00000292377|GPC2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	478.312961	954.611368	0.0045756	2.1886E-06	2.6324	0.0012591	2.637	0.0012613	478.31396416822815	36.772	0.80082	36.754	36.464	37.265	-0.018673	0.0084524	-0.00036364	NaN	20.947	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70580	+		28847	23616	19298	19308							0.13224692005144334
LKDALILLG	9	Unmodified	_LKDALILLG_					0	0	0			REV__ENSG00000213420|ENST00000292377|GPC2	REV__ENSG00000213420|ENST00000292377|GPC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	478.312961	954.611368	-0.93619	-0.00044779	3.6929	0.0017664	2.7567	0.0013186	478.3144669764732	36.723	0.59466	36.747	36.434	37.029	0.023624	0.0013874	0.00065087	NaN	20.947	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67131	+		28848	23616	19298	19308							0.13224692005144334
LKDALILLG	9	Unmodified	_LKDALILLG_					0	0	0			REV__ENSG00000213420|ENST00000292377|GPC2	REV__ENSG00000213420|ENST00000292377|GPC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	478.312961	954.611368	0.2022	9.6713E-05	2.5816	0.0012348	2.7838	0.0013315	478.314123442397	36.494	0.60918	36.597	36.346	36.955	0.10306	-0.14838	-0.00041224	NaN	20.947	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62576	+		28849	23616	19298	19308							0.13224692005144334
LKDALILLG	9	Unmodified	_LKDALILLG_					0	0	0			REV__ENSG00000213420|ENST00000292377|GPC2	REV__ENSG00000213420|ENST00000292377|GPC2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	478.312961	954.611368	0.61932	0.00029623	2.0796	0.0009947	2.6989	0.0012909	478.3138618993178	36.395	0.89686	36.835	36.259	37.156	0.44043	0.09019	-0.00089247	NaN	20.947	35	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	159030	+		28850	23616	19298	19308							0.13224692005144334
LKDENLPPV	9	Unmodified	_LKDENLPPV_					0	0	0		nc|ENSG00000139496|Q9BVL2-2|NUP58;nc|ENSG00000139496|Q9BVL2-3|NUP58;ENSG00000139496|ENST00000381736|NUP58	nc|ENSG00000139496|Q9BVL2-2|NUP58	nc|ENSG00000139496|Q9BVL2-2|NUP58	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.79541015625	2	512.787307	1023.56006	1.368	0.0007015	-1.752	-0.00089842	-0.38402	-0.00019692	512.7862946925073	28.292	0.6865	28.119	27.713	28.399	-0.17336					37	16	3	0	0	0	0.44421	1	1692	1692		54.776	1.8396	1	224460			28851	4372	19299	19309	32871	32871					0.0492232324043016
LKDKLSKLNIH	11	Unmodified	_LKDKLSKLNIH_					0	0	0		ENSG00000236699|ENST00000420470|ARHGEF38	ENSG00000236699|ENST00000420470|ARHGEF38	ENSG00000236699|ENST00000420470|ARHGEF38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.93988037109375	3	436.938117	1307.79252	-0.48993	-0.00021407	1.6948	0.00074052	1.2049	0.00052646	436.93993311330917	55.356	1.163	55.329	54.946	56.109	-0.027275					72	30	4	0	0	0	0.75457	1	5032	5032		21.032	0.71722	1	489260			28852	8756	19300	19310	32872	32872					0.1509358531104681
LKDLLAASA	9	Unmodified	_LKDLLAASA_					0	0	0			REV__ENSG00000177971|ENST00000403490|IMP3	REV__ENSG00000177971|ENST00000403490|IMP3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2742919921875	2	451.271293	900.528032	-1.0731	-0.00048428	-2.5071	-0.0011314	-3.5802	-0.0016157	451.2700381653517	95.4	1.4553	95.4	94.847	96.302	0					41	33	2	0	0	0	0.20789	1	9491	9491		11.511	0.64546	1	127040	+		28853	22242	19301	19311	32873	32873					0.07378955557271638
LKDLPPSL	8	Unmodified	_LKDLPPSL_					0	0	0			REV__ENST00000486433.5_1_12:56865273-56869736:-|nuORF	REV__ENST00000486433.5_1_12:56865273-56869736:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7683410644531	2	441.768386	881.522219	2.7351	0.0012083	-2.9605	-0.0013079	-0.22539	-9.957E-05	441.76685786355085	107.36	1.6234	107.32	106.14	107.77	-0.034134					55	37	2	0	0	0	0.884	1	11896	11896		33.516	0	1	1711100	+		28854	19219	19302	19312	32874	32874					0.07671857045625075
LKDNEEMMNL	10	Unmodified	_LKDNEEMMNL_					0	0	0			REV__ENSG00000197748|ENST00000357060|CFAP43	REV__ENSG00000197748|ENST00000357060|CFAP43	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2750549316406	3	412.858146	1235.55261	0.36461	0.00015053	0.69702	0.00028777	1.0616	0.0004383	412.8584486817368	29.75	0.64157	29.661	29.319	29.96	-0.089546					29	14	3	0	0	0	0.37624	1	1895	1895		26.063	13.857	1	124360	+		28855	23265	19303	19313	32875	32875					-0.0557452041380202
LKDQTKPTPLI	11	Unmodified	_LKDQTKPTPLI_					0	0	0		nc|ENSG00000117360|O43395-3|PRPF3;ENSG00000117360|ENST00000324862|PRPF3;ENST00000467329.5_1_1:150300781-150316915:+|nuORF	nc|ENSG00000117360|O43395-3|PRPF3;ENSG00000117360|ENST00000324862|PRPF3	ENSG00000117360|ENST00000324862|PRPF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8836059570312	2	627.37682	1252.73909	6.587	0.0041325	2.6217	0.0016448	9.2086	0.0057773	627.3783410585748	112.58	0.5701	112.61	112.27	112.84	0.032707					46	19	3	0	0	0	0.7342	1	13654	13654		25.574	4.6271	1	89780			28856	14862;2972	19304	19314	32876	32876					0.12282787808521789
LKDRADKT	8	Unmodified	_LKDRADKT_					0	0	0			REV__ENSG00000167858|ENST00000338694|TEKT1	REV__ENSG00000167858|ENST00000338694|TEKT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.7686767578125	2	473.769448	945.524344	0.37537	0.00017784	-0.39462	-0.00018696	-0.019248	-9.1192E-06	473.76915790053243	28.466	0.54151	28.502	28.223	28.764	0.03607					29	16	3	0	0	0	0.87479	1	1351	1351		30.504	3.7075	1	57511	+		28857	21432	19305	19315	32877	32877					0.049402857834252245
LKDRYDFGF	9	Unmodified	_LKDRYDFGF_					0	0	0		ENSG00000147885|ENST00000380216|IFNA16	ENSG00000147885|ENST00000380216|IFNA16	ENSG00000147885|ENST00000380216|IFNA16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.7910766601562	2	580.790381	1159.56621	0.017134	9.9514E-06	0.0084057	4.882E-06	0.02554	1.4833E-05	580.7901619951415	19.104	0.8561	19.03	18.868	19.724	-0.073704					28	22	2	0	0	0	0.78058	1	376	376		30.504	6.3009	1	56077			28858	4927	19306	19316	32878	32878					-0.0071915852806796465
LKDSKEVPV	9	Unmodified	_LKDSKEVPV_					0	0	0		ENSG00000174236|ENST00000310791|REP15	ENSG00000174236|ENST00000310791|REP15	ENSG00000174236|ENST00000310791|REP15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.79364013671875	2	507.795132	1013.57571	-0.85867	-0.00043603	0.28848	0.00014649	-0.57019	-0.00028954	507.7951384081689	60.196	0.84625	60.587	60.294	61.14	0.39077					41	23	2	0	0	0	0.28163	1	6406	6406		66.429	7.6473	1	776630			28859	6920	19307	19317	32879	32879					0.06946609757483202
LKDSVTAVVFV	11	Unmodified	_LKDSVTAVVFV_					0	0	0		nc|ENSG00000183023|P32418-2|SLC8A1;nc|ENSG00000183023|P32418-3|SLC8A1;nc|ENSG00000183023|P32418-4|SLC8A1;nc|ENSG00000183023|P32418-5|SLC8A1;ENSG00000183023|ENST00000332839|SLC8A1;nc|ENSG00000100678|P57103-4|SLC8A3;nc|ENSG00000100678|P57103-5|SLC8A3;ENSG00000100678|ENST00000356921|SLC8A3;nc|ENSG00000100678|P57103-6|SLC8A3;nc|ENSG00000100678|P57103-7|SLC8A3;nc|ENSG00000100678|P57103|SLC8A3	nc|ENSG00000183023|P32418-2|SLC8A1	nc|ENSG00000183023|P32418-2|SLC8A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3430786132812	2	589.344989	1176.67542	-0.65438	-0.00038565	-2.8884	-0.0017022	-3.5427	-0.0020879	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.7342	1	10127	10127		25.574	1.0549	1	16804000			28860	7494	19308	19318	32880	32880					0.09415427371436635
LKDSVTAVVFV	11	Unmodified	_LKDSVTAVVFV_					0	0	0		nc|ENSG00000183023|P32418-2|SLC8A1;nc|ENSG00000183023|P32418-3|SLC8A1;nc|ENSG00000183023|P32418-4|SLC8A1;nc|ENSG00000183023|P32418-5|SLC8A1;ENSG00000183023|ENST00000332839|SLC8A1;nc|ENSG00000100678|P57103-4|SLC8A3;nc|ENSG00000100678|P57103-5|SLC8A3;ENSG00000100678|ENST00000356921|SLC8A3;nc|ENSG00000100678|P57103-6|SLC8A3;nc|ENSG00000100678|P57103-7|SLC8A3;nc|ENSG00000100678|P57103|SLC8A3	nc|ENSG00000183023|P32418-2|SLC8A1	nc|ENSG00000183023|P32418-2|SLC8A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3421630859375	2	589.344989	1176.67542	-1.324	-0.0007803	-2.248	-0.0013248	-3.572	-0.0021051	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.72739	1	10091	10091		27.047	2.5281	1	17904000			28861	7494	19308	19318	32881	32881					0.09415427371436635
LKEATGKS	8	Unmodified	_LKEATGKS_					0	0	0			REV__nc|ENSG00000150093|P05556-2|ITGB1	REV__nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2396240234375	2	417.239993	832.465432	-1.799	-0.00075061	-0.033577	-1.401E-05	-1.8326	-0.00076462	417.2397355139431	88.204	2.4422	88.405	87.8	90.242	0.20115					131	57	3	0	0	0	0.89494	1	8755	8755		37.159	1.5408	1	1231700	+		28862	20203	19309	19319	32882	32882					0.04249809489101608
LKEAVADRTT	10	Unmodified	_LKEAVADRTT_					0	0	0		nc|ENSG00000165695|Q96MA6-2|AK8;ENSG00000165695|ENST00000298545|AK8;ENST00000476719.1_1_9:135601077-135753754:-|nuORF	nc|ENSG00000165695|Q96MA6-2|AK8	nc|ENSG00000165695|Q96MA6-2|AK8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.306396484375	2	552.306395	1102.59824	-1.4446	-0.00079788	1.6112	0.00088988	0.16659	9.2009E-05	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.86698	1	9265	9265		28.081	4.5588	1	1677300			28863	6115	19310	19320	32883	32883					0.05104209155092576
LKECIRALGR	10	Unmodified	_LKECIRALGR_					0	0	0		nc|ENSG00000068796|O00139-2|KIF2A;nc|ENSG00000068796|O00139-1|KIF2A;nc|ENSG00000068796|O00139-5|KIF2A;nc|ENSG00000068796|O00139|KIF2A;ENSG00000068796|ENST00000407818|KIF2A	nc|ENSG00000068796|O00139-2|KIF2A	nc|ENSG00000068796|O00139-2|KIF2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.8450927734375	2	579.842425	1157.6703	-0.90191	-0.00052297	3.865	0.0022411	2.963	0.0017181	579.8446027793001	102.43	1.6108	102.45	102.08	103.69	0.01989					83	39	4	0	0	0	0.82886	1	11038	11038		37.812	1.3648	1	1265800			28864	1208	19311	19321	32884	32884					0.09776845027818126
LKEDYNQWNNL	11	Unmodified	_LKEDYNQWNNL_					0	0	0		ENSG00000158006|ENST00000374282|PAFAH2	ENSG00000158006|ENST00000374282|PAFAH2	ENSG00000158006|ENST00000374282|PAFAH2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.3023681640625	3	479.565008	1435.67319	1.2661	0.00060716	2.1815	0.0010462	3.4476	0.0016533	479.56601735393104	19.626	0.33044	19.156	19.019	19.35	-0.46967					11	6	2	0	0	0	0.17729	1	556	556		12.957	0	1	32175			28865	5455	19312	19322	32885	32885					-0.027216531042995484
LKEEKKKKNRK	11	Unmodified	_LKEEKKKKNRK_					0	0	0		ENST00000543160.5_1_X:101409184-101409721:-|nuORF	ENST00000543160.5_1_X:101409184-101409721:-|nuORF	ENST00000543160.5_1_X:101409184-101409721:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.97412109375	3	476.97182	1427.89363	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.833	1	21.817	21.317	22.317	-0.016428								0	0	0	0.56276	1	615	615		18.332	4.2457	1				28866	13549	19313	19323	32886	32886					0.19680037013745277
LKEESLTK	8	Unmodified	_LKEESLTK_					0	0	0		ENSG00000148513|ENST00000361713|ANKRD30A	ENSG00000148513|ENST00000361713|ANKRD30A	ENSG00000148513|ENST00000361713|ANKRD30A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.7821044921875	2	474.274032	946.533512	-0.2664	-0.00012635	2.2596	0.0010717	1.9932	0.00094531	474.2748995604784	27.518	1.4991	27.479	26.805	28.305	-0.038525					44	35	2	0	0	0	0.4196	1	1258	1258		25.574	0	1	39487			28867	4967	19314	19324	32887	32887					0.05810634349097654
LKEIDPSPFSP	11	Unmodified	_LKEIDPSPFSP_					0	0	0			REV__ENST00000609618.2_1_16:29831113-29831224:+|nuORF	REV__ENST00000609618.2_1_16:29831113-29831224:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	615.3204345703125	2	615.324254	1228.63395	-0.56338	-0.00034666	-3.0415	-0.0018715	-3.6049	-0.0022182	615.3223861268581	47.682	0.57162	48.152	47.894	48.466	0.46941					41	14	4	0	0	0	0.52654	1	4563	4563		50.034	0.59196	1	1292900	+		28868	28796	19315	19325	32888	32888					0.028782466120901518
LKEIDPSPFSP	11	Unmodified	_LKEIDPSPFSP_					0	0	0			REV__ENST00000609618.2_1_16:29831113-29831224:+|nuORF	REV__ENST00000609618.2_1_16:29831113-29831224:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	615.324254	1228.63395	-0.56338	-0.00034666	-3.0415	-0.0018715	-3.6049	-0.0022182	615.3223861268581	47.682	0.57162	48.152	47.894	48.466	0.46941	-0.11543	-5.7919E-05	NaN	50.034	41	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1292900	+		28869	28796	19315	19325							0.028782466120901518
LKEIEAENKES	11	Unmodified	_LKEIEAENKES_					0	0	0		ENSG00000175595|ENST00000311895|ERCC4	ENSG00000175595|ENST00000311895|ERCC4	ENSG00000175595|ENST00000311895|ERCC4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	645.340087890625	2	645.332807	1288.65106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.4	1	66.527	66.027	67.027	0.12649								0	0	0	0.56276	1	5897	5897		35.152	1.2304	1				28870	7027	19316	19326	32889	32889					0.01828122427218659
LKEIHFHLI	9	Unmodified	_LKEIHFHLI_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3455810546875	2	575.342584	1148.67061	2.6142	0.0015041	2.7738	0.0015959	5.388	0.0031	575.3441275619858	98.676	2.5508	98.621	98.113	100.66	-0.054825					162	58	5	0	0	0	0.78536	2	10671	10659;10671		29.15	2.2429	1	4409300	+		28871	16404	19317	19327	32890;32891	32891					0.10222588019314571
LKEIHFHLI	9	Unmodified	_LKEIHFHLI_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.3455810546875	2	575.342584	1148.67061	0.97572	0.00056137	4.3533	0.0025046	5.329	0.003066	575.3449806461122	98.555	2.3295	98.603	98.055	100.38	0.048157					165	53	5	0	0	0	0.77546	1	10534	10534		31.955	2.7848	1	4316200	+		28872	16404	19317	19327	32892	32892					0.10222588019314571
LKEILKEIGVQ	11	Unmodified	_LKEILKEIGVQ_					0	0	0		ENSG00000188342|ENST00000340473|GTF2F2	ENSG00000188342|ENST00000340473|GTF2F2	ENSG00000188342|ENST00000340473|GTF2F2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.2501220703125	3	423.930739	1268.77039	2.8854	0.0012232	0.76587	0.00032467	3.6512	0.0015479	423.9311034408425	107.3	0.71455	107.34	107.11	107.82	0.035622					27	16	2	0	0	0	0.17318	1	11765	11765		12.433	3.6335	1	106590			28873	7923	19318	19328	32893	32893					0.14675360842602458
LKEIVYCQLY	10	Unmodified	_LKEIVYCQLY_					0	0	0		ENST00000453424.6_1_10:45953568-45953646:-|nuORF	ENST00000453424.6_1_10:45953568-45953646:-|nuORF	ENST00000453424.6_1_10:45953568-45953646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.5608825683594	3	424.561658	1270.66315	1.4537	0.00061718	-3.6345	-0.0015431	-2.1808	-0.00092588	424.5601606035987	27.607	1.8639	27.352	26.945	28.809	-0.25465					132	44	5	0	0	0	0.81117	1	1601	1601		38.754	4.6671	1	5946800			28874	11933	19319	19329	32894	32894					0.03864067636732216
LKEKAMKIFN	10	Unmodified	_LKEKAMKIFN_					0	0	0			REV__nc|ENSG00000015592|Q9H169-3|STMN4	REV__nc|ENSG00000015592|Q9H169-3|STMN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3553466796875	2	611.354834	1220.69511	2.1766	0.0013307	-0.33396	-0.00020417	1.8427	0.0011265	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.80179	1	10043	10043		39.253	4.1008	1	5823000	+		28875	16212	19320	19330	32895	32895					0.09359480110538243
LKEKAMKIFN	10	Unmodified	_LKEKAMKIFN_					0	0	0			REV__nc|ENSG00000015592|Q9H169-3|STMN4	REV__nc|ENSG00000015592|Q9H169-3|STMN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3551635742188	2	611.354834	1220.69511	0.21646	0.00013233	2.3298	0.0014243	2.5463	0.0015567	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.86471	1	10073	10073		30.318	6.795	1	12399000	+		28876	16212	19320	19330	32896	32896					0.09359480110538243
LKEKESRSL	9	Unmodified	_LKEKESRSL_					0	0	0			REV__ENSG00000151779|ENST00000281513|NBAS;REV__nc|ENSG00000151779|A2RRP1-2|NBAS	REV__nc|ENSG00000151779|A2RRP1-2|NBAS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3168334960938	2	545.316763	1088.61897	-0.68757	-0.00037494	0.63783	0.00034782	-0.049742	-2.7125E-05	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.68711	1	8522	8522		41.427	4.2675	1	3608000	+		28877	20268;29931	19321	19331	32897	32897					0.07820799534761136
LKEKQAPR	8	Unmodified	_LKEKQAPR_					0	0	0		nc|ENSG00000166348|Q70EL1-6|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-7|USP54;ENSG00000166348|ENST00000687698|USP54	nc|ENSG00000166348|Q70EL1-6|USP54	nc|ENSG00000166348|Q70EL1-6|USP54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	485.2960510253906	2	485.295633	968.576714	-1.6629	-0.00080698	1.9656	0.0009539	0.30274	0.00014692	485.2963525213687	103.39	1.0146	103.51	103.11	104.12	0.11494					58	25	3	0	0	0	0.89494	1	10869	10869		37.159	1.5408	1	716730			28878	6182	19322	19332	32898	32898					0.09116868917033116
LKEKQAPR	8	Unmodified	_LKEKQAPR_					0	0	0		nc|ENSG00000166348|Q70EL1-6|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-7|USP54;ENSG00000166348|ENST00000687698|USP54	nc|ENSG00000166348|Q70EL1-6|USP54	nc|ENSG00000166348|Q70EL1-6|USP54	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	485.295633	968.576714	-0.088243	-4.2824E-05	-0.30087	-0.00014601	-0.38911	-0.00018883	485.29545846681884	103.59	1.0224	103.58	103.22	104.25	-0.0035706	0.065525	5.1952E-05	NaN	37.159	30	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	387950			28879	6182	19322	19332							0.09116868917033116
LKEKQAPR	8	Unmodified	_LKEKQAPR_					0	0	0		nc|ENSG00000166348|Q70EL1-6|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-7|USP54;ENSG00000166348|ENST00000687698|USP54	nc|ENSG00000166348|Q70EL1-6|USP54	nc|ENSG00000166348|Q70EL1-6|USP54	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	485.295633	968.576714	0.78791	0.00038237	-0.9488	-0.00046045	-0.16089	-7.8079E-05	485.29516263738145	103.33	0.94638	103.46	103.17	104.12	0.12621	-0.055319	-0.00057692	NaN	37.159	31	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	583220			28880	6182	19322	19332							0.09116868917033116
LKELAKKPHTS	11	Unmodified	_LKELAKKPHTS_					0	0	0		nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;ENSG00000073921|ENST00000393346|PICALM	nc|ENSG00000073921|Q13492-4|PICALM	nc|ENSG00000073921|Q13492-4|PICALM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3798217773438	2	626.374612	1250.73467	2.9096	0.0018225	4.2134	0.0026392	7.123	0.0044617	626.3771603031328	107.89	0.4325	107.86	107.51	107.94	-0.031487					32	10	4	0	0	0	0.6493	1	11950	11950		38.754	8.4359	1	11845000			28881	1302	19323	19333	32899	32899					0.11933323385619587
LKELCVLLD	9	Unmodified	_LKELCVLLD_					0	0	0		ENSG00000055813|ENST00000407595|CCDC85A	ENSG00000055813|ENST00000407595|CCDC85A	ENSG00000055813|ENST00000407595|CCDC85A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.30322265625	2	523.301736	1044.58892	1.4247	0.00074556	1.9478	0.0010193	3.3725	0.0017648	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.77244	1	8909	8909		32.812	1.2826	1	3882100			28882	1029	19324	19334	32900	32900					0.06840724545213561
LKELCVLLD	9	Unmodified	_LKELCVLLD_					0	0	0		ENSG00000055813|ENST00000407595|CCDC85A	ENSG00000055813|ENST00000407595|CCDC85A	ENSG00000055813|ENST00000407595|CCDC85A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3037719726562	2	523.301736	1044.58892	0.71899	0.00037625	2.71	0.0014182	3.429	0.0017944	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.7932	1	9243	9243		26.693	1.2427	1	13442000			28883	1029	19324	19334	32901	32901					0.06840724545213561
LKELFKVTSI	10	Unmodified	_LKELFKVTSI_					0	0	0			REV__chr1:84479965-84480956|16|11.06|0.28|5.31|+|0|None,RPF1|1	REV__chr1:84479965-84480956|16|11.06|0.28|5.31|+|0|None,RPF1|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3429565429688	2	589.363182	1176.71181	-0.678	-0.00039959	0.25585	0.00015079	-0.42215	-0.0002488	589.3632143446258	94.849	1.2436	94.917	94.389	95.632	0.068344					34	29	2	0	0	0	0.37624	1	9843	9843		29.17	0	1	75828	+		28884	15458	19325	19335	32902	32902					0.13052304268148873
LKELFQTPVC	10	Unmodified	_LKELFQTPVC_					0	0	0		nc|ENSG00000148773|P46013-2|MKI67;chr10:128113602-128116491|53|23.43|0.71|5.05|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67	nc|ENSG00000148773|P46013-2|MKI67	nc|ENSG00000148773|P46013-2|MKI67	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3428344726562	2	589.317917	1176.62128	0.83597	0.00049265	-3.5735	-0.0021059	-2.7375	-0.0016133	589.3153985307015	94.848	0.16412	95.011	94.867	95.031	0.16307					6	3	2	0	0	0	0.37624	1	9703	9703		36.447	11.928	1	57184			28885	66	19326	19336	32903	32903					0.0400351194821269
LKELIIDS	8	Unmodified	_LKELIIDS_					0	0	0		ENST00000485713.5_1_7:150755703-150755907:+|nuORF	ENST00000485713.5_1_7:150755703-150755907:+|nuORF	ENST00000485713.5_1_7:150755703-150755907:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77740478515625	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.549	1	80.549	80.049	81.049	0								0	0	0	0.29631	1	7438	7438		25.45	0	1				28886	12566	19327	19337	32904	32904					0.07575822354476713
LKELKKARPAS	11	Unmodified	_LKELKKARPAS_					0	0	0			REV__ENST00000426228.1_1_3:20082197-20142489:+|nuORF	REV__ENST00000426228.1_1_3:20082197-20142489:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	414.2610778808594	3	414.262712	1239.76631	-1.9366	-0.00080227	0.12732	5.2745E-05	-1.8093	-0.00074953	414.2626627294579	18	0.43207	18.044	17.897	18.329	0.044048					55	22	3	0	0	0	0.69071	1	293	293		33.039	1.0053	1	474120	+		28887	18035	19328	19338	32905	32905					0.1560131613955491
LKELNGRLVAR	11	Unmodified	_LKELNGRLVAR_					0	0	0			REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.892822265625	2	634.893503	1267.77245	1.3476	0.00085558	-2.8123	-0.0017855	-1.4647	-0.0009299	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.53361	1	11478	11478		49.536	0	1	42647000	+		28888	23179	19329	19339	32906	32906					0.1492783437106482
LKELPLAIVVL	11	Unmodified	_LKELPLAIVVL_					0	0	0		ENST00000396623.7_1_8:67380599-67380680:+|nuORF	ENST00000396623.7_1_8:67380599-67380680:+|nuORF	ENST00000396623.7_1_8:67380599-67380680:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3663330078125	2	604.40485	1206.79515	1.046	0.00063218	2.8302	0.0017106	3.8761	0.0023428	604.4065523102299	104.7	0.45403	104.87	104.81	105.26	0.17096					17	10	2	0	0	0	0.17714	1	11130	11130		13.454	0	1	282310			28889	11121	19330	19340	32907	32907					0.20002040715985459
LKELRHLKM	9	Unmodified	_LKELRHLKM_					0	0	0		ENST00000485726.1_1_7:103828364-103848439:-|nuORF	ENST00000485726.1_1_7:103828364-103848439:-|nuORF	ENST00000485726.1_1_7:103828364-103848439:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.3567504882812	2	584.355168	1166.69578	2.1397	0.0012504	-0.73896	-0.00043181	1.4008	0.00081854	584.3547865712267	92.649	3.0655	92.585	91.199	94.264	-0.064148					195	72	3	0	0	0	0.76764	1	9764	9764		34.173	2.6427	1	743110			28890	12567	19331	19341	32908	32908					0.11910319550224813
LKELRIKHGN	10	Unmodified	_LKELRIKHGN_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3662719726562	2	604.367121	1206.71969	-0.16822	-0.00010167	-0.91026	-0.00055013	-1.0785	-0.0006518	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.86106	5	10760	10760;10965;11001;11013;11025		33.922	5.8401	1	47715000			28891	3990	19332	19342	32909;32910;32911;32912;32913	32909					0.12459876308253115
LKELRIKHGN	10	Unmodified	_LKELRIKHGN_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3665771484375	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.86106	5	11502	11379;11391;11466;11502;11526		33.922	5.7032	1	63350000			28892	3990	19332	19342	32914;32915;32916;32917;32918	32917					0.12459876308253115
LKELRIKHGN	10	Unmodified	_LKELRIKHGN_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3662109375	2	604.367121	1206.71969	3.2045	0.0019367	-4.3338	-0.0026192	-1.1294	-0.00068255	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.60985	5	11606	11606;11643;11716;11727;11763		49.536	16.786	1	63446000			28893	3990	19332	19342	32919;32920;32921;32922;32923	32919					0.12459876308253115
LKELRIKHGN	10	Unmodified	_LKELRIKHGN_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.366455078125	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.78666	11	11612	11345;11490;11503;11515;11527;11540;11552;11564;11576;11612;11775		40.058	10.888	1	64334000			28894	3990	19332	19342	32924;32925;32926;32927;32928;32929;32930;32931;32932;32933;32934	32933					0.12459876308253115
LKELRIKHGN	10	Unmodified	_LKELRIKHGN_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.366455078125	2	604.367121	1206.71969	1.0484	0.00063359	-2.1061	-0.0012728	-1.0577	-0.00063923	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.70553	4	11361	11023;11278;11302;11361		44.377	14.059	1	105850000			28895	3990	19332	19342	32935;32936;32937;32938	32938					0.12459876308253115
LKELRIKHGN	10	Unmodified	_LKELRIKHGN_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3668212890625	2	604.367121	1206.71969	0.90473	0.00054679	-2.0534	-0.001241	-1.1487	-0.00069423	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.73395	5	11304	11039;11243;11256;11304;11340		42.864	11.804	1	105740000			28896	3990	19332	19342	32939;32940;32941;32942;32943	32942					0.12459876308253115
LKELRIKHGN	10	Unmodified	_LKELRIKHGN_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3668823242188	2	604.367121	1206.71969	-1.2751	-0.0007706	0.20453	0.00012361	-1.0705	-0.00064699	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.73395	8	11386	11156;11216;11278;11301;11374;11386;11399;11412		42.864	10.114	1	103250000			28897	3990	19332	19342	32944;32945;32946;32947;32948;32949;32950;32951	32949					0.12459876308253115
LKELRIKHGN	10	Unmodified	_LKELRIKHGN_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3665771484375	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.31985	3	12700	12676;12700;12792		70.816	29.39	1	5984800			28898	3990	19332	19342	32952;32953;32954	32953					0.12459876308253115
LKELRIKHGN	10	Unmodified	_LKELRIKHGN_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3662109375	2	604.367121	1206.71969	3.6458	0.0022034	-4.4074	-0.0026637	-0.76167	-0.00046033	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.8545	1	12762	12762		36.447	9.3994	1	5883900			28899	3990	19332	19342	32955	32955					0.12459876308253115
LKELVPTL	8	Unmodified	_LKELVPTL_					0	0	0		nc|ENSG00000125968|P41134-2|ID1;ENSG00000125968|ENST00000376112|ID1	nc|ENSG00000125968|P41134-2|ID1	nc|ENSG00000125968|P41134-2|ID1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79071044921875	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.85277	1	3004	3004		25.45	0	1	608260			28900	3432	19333	19343	32956	32956					0.10984716596760791
LKELWLVIHG	10	Unmodified	_LKELWLVIHG_					0	0	0		ENST00000514123.5_1_16:69458586-69482095:+|nuORF;ENSG00000103018|ENST00000307892|CYB5B	ENST00000514123.5_1_16:69458586-69482095:+|nuORF	ENST00000514123.5_1_16:69458586-69482095:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3670043945312	2	604.363516	1206.71248	1.0484	0.00063359	3.8594	0.0023325	4.9078	0.0029661	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.8545	1	11349	11349		17.365	0	1	105850000			28901	2041	19334	19344	32957	32957					0.11739143707836774
LKEMEERAM	9	Unmodified	_LKEMEERAM_					0	0	0			REV__ENSG00000137501|ENST00000359152|SYTL2	REV__ENSG00000137501|ENST00000359152|SYTL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8531494140625	2	568.775559	1135.53657	-1.3911	-0.00079121	-3.4239	-0.0019475	-4.815	-0.0027387	568.7743045214908	102.24	0.58804	102.38	102.1	102.69	0.13569					20	14	2	0	0	0	0.20789	1	10688	10688		62.107	0	1	49142	+		28902	19388	19335	19345	32958	32958					-0.02578181860053519
LKEMKEALGTP	11	Unmodified	_LKEMKEALGTP_					0	0	0		ENST00000594082.1_1_19:6822465-6826923:+|nuORF;nc|ENSG00000141968|P15498-2|VAV1;ENSG00000141968|ENST00000602142|VAV1	ENST00000594082.1_1_19:6822465-6826923:+|nuORF	ENST00000594082.1_1_19:6822465-6826923:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.837158203125	2	608.833931	1215.65331	3.145	0.0019148	1.8963	0.0011545	5.0413	0.0030693	608.8349484484327	110.59	1.437	110.57	110.28	111.71	-0.027641					106	45	4	0	0	0	0.70737	1	12239	12239		30.318	5.7985	1	3029200			28903	4536	19336	19346	32959	32959					0.05410879631358512
LKEMPPPPAL	10	Unmodified	_LKEMPPPPAL_					0	0	0		ENST00000397463.2_1_2:133403546-133403624:-|nuORF	ENST00000397463.2_1_2:133403546-133403624:-|nuORF	ENST00000397463.2_1_2:133403546-133403624:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.84033203125	2	546.809728	1091.6049	-0.39873	-0.00021803	2.0392	0.0011151	1.6405	0.00089703	546.8106514591385	100.92	0.17176	100.95	100.84	101.01	0.031036					5	3	2	0	0	0	0.37624	1	10755	10755		45.952	0	1	50619			28904	11150	19337	19347	32960	32960					0.06276430782099851
LKEMPPPPAL	10	Unmodified	_LKEMPPPPAL_					0	0	0		ENST00000397463.2_1_2:133403546-133403624:-|nuORF	ENST00000397463.2_1_2:133403546-133403624:-|nuORF	ENST00000397463.2_1_2:133403546-133403624:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8401489257812	2	546.809728	1091.6049	3.3478	0.0018306	-1.3085	-0.0007155	2.0393	0.0011151	547.31139612828	100.89	0.29405	100.84	100.62	100.92	-0.052116					11	6	2	0	0	0	0.37624	1	10954	10954		76.774	25.439	1	83241			28905	11150	19337	19347	32961	32961					0.06276430782099851
LKENKEKLSK	10	Unmodified	_LKENKEKLSK_					0	0	0			REV__nc|ENSG00000138778|Q02224-3|CENPE	REV__nc|ENSG00000138778|Q02224-3|CENPE	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7853698730469	3	406.246839	1215.71869	1.4765	0.00059981	-1.5676	-0.00063685	-0.091175	-3.7039E-05	406.24565750020105	33.284	0.25465	33.453	33.314	33.568	0.16971					6	5	2	0	0	0	0.37624	1	2401	2401		11.932	0	1	21826	+		28906	15815	19338	19348	32962	32962					0.1194561714869451
LKENSSKKK	9	Unmodified	_LKENSSKKK_					0	0	0			REV__ENSG00000083097|ENST00000349129|DOP1A	REV__ENSG00000083097|ENST00000349129|DOP1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.3180541992188	2	531.319306	1060.62406	-0.6637	-0.00035264	0.93655	0.00049761	0.27285	0.00014497	531.319555565115	95.322	2.6544	95.322	94.812	97.466	0					162	61	5	0	0	0	0.6204	2	9447	9447;9530		45.972	10.82	1	1864100	+		28907	16847	19339	19349	32963;32964	32963					0.0961710339736328
LKENSSKKK	9	Unmodified	_LKENSSKKK_					0	0	0			REV__ENSG00000083097|ENST00000349129|DOP1A	REV__ENSG00000083097|ENST00000349129|DOP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.3187866210938	2	531.319306	1060.62406	1.2436	0.00066073	-1.246	-0.000662	-0.0023897	-1.2697E-06	531.3184005268905	94.973	2.3333	95.019	94.535	96.868	0.046173					183	54	5	0	0	0	0.71772	1	10008	10008		39.253	7.723	1	4128600	+		28908	16847	19339	19349	32965	32965					0.0961710339736328
LKEPNIKIEKV	11	Unmodified	_LKEPNIKIEKV_					0	0	0			REV__ENSG00000178105|ENST00000322536|DDX10	REV__ENSG00000178105|ENST00000322536|DDX10	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.601318359375	3	437.606255	1309.79694	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.357	1	55.357	54.857	55.857	0								0	0	0	0.56276	1	4695	4695		24.276	0.76158	1		+		28909	22255	19340	19350	32966	32966					0.15443049733926273
LKEPRPRL	8	Unmodified	_LKEPRPRL_					0	0	0		ENSG00000105429|ENST00000251268|MEGF8;nc|ENSG00000105429|Q7Z7M0-2|MEGF8	ENSG00000105429|ENST00000251268|MEGF8	ENSG00000105429|ENST00000251268|MEGF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.8178405761719	2	504.819276	1007.624	1.3418	0.00067735	-4.2381	-0.0021395	-2.8963	-0.0014621	504.8170047325148	99.257	0.71672	99.619	99.369	100.09	0.36136					43	17	3	0	0	0	0.88601	1	11995	11995		34.173	2.6427	1	986030			28910	2217	19341	19351	32967	32967					0.12049148188032177
LKEQQLPTA	9	Unmodified	_LKEQQLPTA_					0	0	0			REV__nc|ENSG00000143369|Q16610-2|ECM1	REV__nc|ENSG00000143369|Q16610-2|ECM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7418212890625	2	514.292756	1026.57096	0.029008	1.4919E-05	1.5704	0.00080766	1.5994	0.00082258	514.2933283785227	93.505	0.34163	93.955	93.864	94.206	0.44989					13	7	2	0	0	0	0.20789	1	11212	11212		18.262	0	1	42749	+		28911	19797	19342	19352	32968	32968					0.058737256147196604
LKERVKVRSP	10	Unmodified	_LKERVKVRSP_					0	0	0			REV__nc|ENSG00000197321|O95425-4|SVIL	REV__nc|ENSG00000197321|O95425-4|SVIL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.5894470214844	3	404.59094	1210.75099	-0.19379	-7.8407E-05	-4.1135	-0.0016643	-4.3073	-0.0017427	404.5891664662758	39.222	1.192	39.169	38.578	39.77	-0.052727					84	33	3	0	0	0	0.86742	1	2366	2366		27.644	5.9582	1	333770	+		28912	23219	19343	19353	32969	32969					0.15404449342349835
LKESFNLLIT	10	Unmodified	_LKESFNLLIT_					0	0	0			REV__ENSG00000137460|ENST00000511601|FHDC1	REV__ENSG00000137460|ENST00000511601|FHDC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3427734375	2	589.344989	1176.67542	-0.40075	-0.00023618	-3.0716	-0.0018102	-3.4723	-0.0020464	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.86225	1	9219	9219		32.751	2.1817	1	4112500	+		28913	19384	19344	19354	32970	32970					0.09415427371436635
LKESFNLLIT	10	Unmodified	_LKESFNLLIT_					0	0	0			REV__ENSG00000137460|ENST00000511601|FHDC1	REV__ENSG00000137460|ENST00000511601|FHDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3428344726562	2	589.344989	1176.67542	-0.6745	-0.00039751	-2.9294	-0.0017264	-3.6039	-0.002124	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.81117	1	10206	10206		38.754	4.832	1	16185000	+		28914	19384	19344	19354	32971	32971					0.09415427371436635
LKESKLGSKTS	11	Unmodified	_LKESKLGSKTS_					0	0	0			REV__ENST00000468564.6_1_22:44584872-44587985:+|nuORF	REV__ENST00000468564.6_1_22:44584872-44587985:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3434448242188	2	589.342978	1176.6714	-1.324	-0.0007803	1.1649	0.00068655	-0.15907	-9.3746E-05	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.69248	1	9842	9842		32.751	1.2207	1	17904000	+		28915	19513	19345	19355	32972	32972					0.09013337877695449
LKETDTATLR	10	Unmodified	_LKETDTATLR_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3195190429688	2	574.319502	1146.62445	-0.44784	-0.0002572	0.5081	0.00029181	0.060262	3.461E-05	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.86587	1	9496	9496		29.17	1.0886	1	1099700			28916	14756	19346	19356	32973	32973					0.05700478326571101
LKETSGLRK	9	Unmodified	_LKETSGLRK_					0	0	0			REV__ENST00000367079.3_1_1:207252363-207252585:+|nuORF	REV__ENST00000367079.3_1_1:207252363-207252585:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3140869140625	2	516.314023	1030.61349	0.80555	0.00041592	-1.2336	-0.00063695	-0.42809	-0.00022103	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.76419	1	10507	10507		35.152	6.0025	1	72906000	+		28917	25547	19347	19357	32974	32974					0.0994112074295117
LKETYKLLLS	10	Unmodified	_LKETYKLLLS_					0	0	0			REV__ENSG00000071894|ENST00000616140|CPSF1	REV__ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3665771484375	2	604.368464	1206.72238	-0.16822	-0.00010167	-3.1319	-0.0018928	-3.3001	-0.0019945	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.85692	3	10928	10819;10831;10928		36.318	4.6834	1	47715000	+		28918	16630	19348	19358	32975;32976;32977	32977					0.12728286922560983
LKETYKLLLS	10	Unmodified	_LKETYKLLLS_					0	0	0			REV__ENSG00000071894|ENST00000616140|CPSF1	REV__ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3663330078125	2	604.368464	1206.72238	-0.48563	-0.0002935	-2.8288	-0.0017096	-3.3144	-0.0020031	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.86802	1	11367	11367		27.047	0.3544	1	63350000	+		28919	16630	19348	19358	32978	32978					0.12728286922560983
LKETYKLLLS	10	Unmodified	_LKETYKLLLS_					0	0	0			REV__ENSG00000071894|ENST00000616140|CPSF1	REV__ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3663940429688	2	604.368464	1206.72238	-0.11879	-7.1791E-05	-3.1394	-0.0018974	-3.2582	-0.0019692	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.86106	4	11393	11393;11417;11429;11453		33.922	8.3476	1	64334000	+		28920	16630	19348	19358	32979;32980;32981;32982	32979					0.12728286922560983
LKETYKLLLS	10	Unmodified	_LKETYKLLLS_					0	0	0			REV__ENSG00000071894|ENST00000616140|CPSF1	REV__ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3663330078125	2	604.368464	1206.72238	1.0484	0.00063359	-4.3277	-0.0026155	-3.2793	-0.0019819	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.86698	1	11106	11106		28.081	7.1346	1	105850000	+		28921	16630	19348	19358	32983	32983					0.12728286922560983
LKETYKLLLS	10	Unmodified	_LKETYKLLLS_					0	0	0			REV__ENSG00000071894|ENST00000616140|CPSF1	REV__ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3665771484375	2	604.368464	1206.72238	0.90473	0.00054679	-4.275	-0.0025837	-3.3703	-0.0020369	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.86802	1	11280	11280		27.047	0.3544	1	105740000	+		28922	16630	19348	19358	32984	32984					0.12728286922560983
LKETYKLLLS	10	Unmodified	_LKETYKLLLS_					0	0	0			REV__ENSG00000071894|ENST00000616140|CPSF1	REV__ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.24664306640625	3	403.248068	1206.72238	-1.9293	-0.00077799	-1.0451	-0.00042145	-2.9745	-0.0011994	403.24758115209465	104.53	3.0767	104.62	103.79	106.87	0.093857					248	75	5	0	0	0	0.84816	1	11003	11003		17.167	6.5799	1	9819800	+		28923	16630	19348	19358	32985	32985					0.12728286922560983
LKETYKLLLS	10	Unmodified	_LKETYKLLLS_					0	0	0			REV__ENSG00000071894|ENST00000616140|CPSF1	REV__ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3667602539062	2	604.368464	1206.72238	-1.2751	-0.0007706	-2.0171	-0.0012191	-3.2921	-0.0019897	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.86698	1	11192	11192		28.081	3.5623	1	103250000	+		28924	16630	19348	19358	32986	32986					0.12728286922560983
LKEVPVDVI	9	Unmodified	_LKEVPVDVI_					0	0	0			REV__nc|ENSG00000172731|Q8TCA0-2|LRRC20	REV__nc|ENSG00000172731|Q8TCA0-2|LRRC20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3087158203125	2	506.307875	1010.6012	-1.1173	-0.00056567	3.1798	0.00161	2.0626	0.0010443	506.3094009229767	39.624	1.765	39.58	38.74	40.505	-0.043697					82	41	3	0	0	0	0.78983	1	2855	2855		27.882	5.9224	1	93842	+		28925	21851	19349	19359	32987	32987					0.0963208427989457
LKEYGVKVL	9	Unmodified	_LKEYGVKVL_					0	0	0		nc|ENSG00000021826|P31327-2|CPS1;ENSG00000021826|ENST00000233072|CPS1;chr2:210519670-210556719|42|16.64|0.62|4.75|+|ENST00000673510|CPS1,CPS1;chr2:210477766-210556719|38|17.71|0.42|5.4|+|ENST00000673711|CPS1,CPS1;chr2:210477766-210519551|49|34.24|0.73|5.55|+|ENST00000673630|CPS1,CPS1;nc|ENSG00000021826|P31327-3|CPS1	nc|ENSG00000021826|P31327-2|CPS1	nc|ENSG00000021826|P31327-2|CPS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8267822265625	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.67345	1	10713	10713		42.396	1.618	1	30867000			28926	326	19350	19360	32988	32988					0.11092077033868009
LKEYIKRQIE	10	Unmodified	_LKEYIKRQIE_					0	0	0		nc|ENSG00000138709|Q659C4-4|LARP1B;nc|ENSG00000138709|Q659C4-9|LARP1B;nc|ENSG00000138709|Q659C4-2|LARP1B;ENSG00000138709|ENST00000326639|LARP1B;nc|ENSG00000138709|Q659C4-3|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.5945739746094	3	440.594238	1318.76089	2.645	0.0011654	-1.63	-0.00071816	1.015	0.00044721	440.59346733501565	25.299	1.8691	24.868	24.408	26.278	-0.4311					104	42	6	0	0	0	0.86549	1	1290	1290		29.551	3.4874	1	1166500			28927	4321	19351	19361	32989	32989					0.11425592557111486
LKFCVFFF	8	Unmodified	_LKFCVFFF_					0	0	0			REV__ENST00000269701.6_1_19:15465203-15465326:-|nuORF	REV__ENST00000269701.6_1_19:15465203-15465326:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3602905273438	2	525.777699	1049.54085	1.2144	0.00063851	0.22815	0.00011996	1.4426	0.00075847	525.7775240539278	36.8	0.9994	37.285	36.79	37.789	0.48581					38	23	2	0	0	0	0.4196	1	2860	2860		35.201	0	1	120940	+		28928	24527	19352	19362	32990	32990					0.018056954158055305
LKFHPIIL	8	Unmodified	_LKFHPIIL_					0	0	0		ENST00000420415.5_2_3:195778645-195778717:-|nuORF	ENST00000420415.5_2_3:195778645-195778717:-|nuORF	ENST00000420415.5_2_3:195778645-195778717:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2336120605469	2	490.818213	979.621873	-1.2705	-0.00062356	-4.0551	-0.0019903	-5.3256	-0.0026139	490.81600949101437	73.142	0.55334	73.53	73.209	73.762	0.38779					31	13	3	0	0	0	0.4196	1	8228	8228		20.482	0	1	875640			28929	11451	19353	19363	32991	32991					0.1312471945022935
LKFLADPKSA	10	Unmodified	_LKFLADPKSA_					0	0	0			REV__ENSG00000256683|ENST00000243644|ZNF350	REV__ENSG00000256683|ENST00000243644|ZNF350	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.316650390625	2	545.318774	1088.623	-1.465	-0.00079892	-2.4047	-0.0013113	-3.8697	-0.0021102	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.70553	1	8652	8652		44.377	7.9304	1	4998200	+		28930	22099	19354	19364	32992	32992					0.08222889028479585
LKFMFQRLH	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LKFMFQRLH_					1	0	0		ENST00000251047.5_1_18:56996671-56996734:-|nuORF	ENST00000251047.5_1_18:56996671-56996734:-|nuORF	ENST00000251047.5_1_18:56996671-56996734:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.23065185546875	3	421.233988	1260.68013	-1.6697	-0.00070333	-4.2362	-0.0017844	-5.9058	-0.0024877	421.2320658932616	42.456	0.53043	43.154	42.85	43.381	0.69754					33	12	4	0	0	0	0.58668	1	3785	3785		47.657	14.618	1	1137100			28931	9296	19355	19365	32993	32993					0.060220330331958394
LKFPVSGGP	9	Unmodified	_LKFPVSGGP_					0	0	0			REV__nc|ENSG00000118946|O14917-2|PCDH17	REV__nc|ENSG00000118946|O14917-2|PCDH17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.7478942871094	2	451.260728	900.506903	-0.16578	-7.4811E-05	-4.4874	-0.002025	-4.6531	-0.0020998	451.2580769181878	34.21	0.41201	34.42	34.234	34.646	0.21003					12	9	2	0	0	0	0.20789	1	2494	2494		35.618	0	1	86494	+		28932	18332	19356	19366	32994	32994					0.05266990248435377
LKFSNFCLA	9	Unmodified	_LKFSNFCLA_					0	0	0		ENSG00000168038|ENST00000301831|ULK4;ENST00000497684.1_1_3:41973315-41996251:-|nuORF	ENSG00000168038|ENST00000301831|ULK4	ENSG00000168038|ENST00000301831|ULK4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	521.65673828125	2	521.773145	1041.53174	-0.00014813	-7.7288E-08	-1.6606	-0.00086644	-1.6607	-0.00086652	521.7714462246545	55.718	0.19938	55.691	55.518	55.718	-0.027279					9	5	2	0	0	0	0.20789	1	5072	5072		26.693	10.22	1	37984			28933	6361	19357	19367	32995	32995					0.012633020594876143
LKFSRTKLSN	10	Unmodified	_LKFSRTKLSN_					0	0	0		ENST00000542921.5_1_10:65024475-65028460:-|nuORF	ENST00000542921.5_1_10:65024475-65028460:-|nuORF	ENST00000542921.5_1_10:65024475-65028460:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8557739257812	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.80179	1	9728	9728		39.253	0	1	18777000			28934	13542	19358	19368	32996	32996					0.10416767697097384
LKFVKSILQYT	11	Unmodified	_LKFVKSILQYT_					0	0	0		ENST00000477995.1_1_6:170176000-170181606:+|nuORF;nc|ENSG00000130023|Q5T6L9-4|ERMARD;nc|ENSG00000130023|Q5T6L9-2|ERMARD;nc|ENSG00000130023|Q5T6L9-3|ERMARD;ENSG00000130023|ENST00000366773|ERMARD	ENST00000477995.1_1_6:170176000-170181606:+|nuORF	ENST00000477995.1_1_6:170176000-170181606:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	447.2735900878906	3	447.270984	1338.79112	1.5068	0.00067396	2.7747	0.0012411	4.2816	0.001915	447.2721343487067	107.14	1.0643	107.17	106.58	107.65	0.035622					102	24	6	0	0	0	0.75779	1	11797	11797		20.315	3.1483	1	9102100			28935	3615	19359	19369	32997	32997					0.13527951222295087
LKFVRLLRFSR	11	Unmodified	_LKFVRLLRFSR_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A;REV__nc|ENSG00000169432|Q15858-4|SCN9A;REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF;REV__nc|ENSG00000144285|P35498-3|SCN1A;REV__ENSG00000185313|ENST00000449082|SCN10A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9729309082031	3	478.973384	1433.89832	0.34157	0.0001636	2.1071	0.0010093	2.4487	0.0011729	478.9743151753571	51.804	1.1678	51.863	51.373	52.541	0.059719					70	37	2	0	0	0	0.80813	1	4161	4161		9.6461	0	1	347520	+		28936	15734;15736;19317;19879;22760	19360	19370	32998	32998					0.19872965947138255
LKFVRLLRFSR	11	Unmodified	_LKFVRLLRFSR_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A;REV__nc|ENSG00000169432|Q15858-4|SCN9A;REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF;REV__nc|ENSG00000144285|P35498-3|SCN1A;REV__ENSG00000185313|ENST00000449082|SCN10A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3087158203125	3	478.973384	1433.89832	-0.25402	-0.00012167	2.9951	0.0014346	2.741	0.0013129	478.9747709878051	47.62	1.4426	47.532	47.242	48.685	-0.087646					53	40	2	0	0	0	0.80593	1	3583	3583		10.104	1.3046	1	370120	+		28937	15734;15736;19317;19879;22760	19360	19370	32999	32999					0.19872965947138255
LKFVRLLRFSR	11	Unmodified	_LKFVRLLRFSR_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A;REV__nc|ENSG00000169432|Q15858-4|SCN9A;REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF;REV__nc|ENSG00000144285|P35498-3|SCN1A;REV__ENSG00000185313|ENST00000449082|SCN10A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97393798828125	3	478.973384	1433.89832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.916	1	53.853	53.353	54.353	-0.062065								0	0	0	0.56276	1	4436	4436		12.957	1.0251	1		+		28938	15734;15736;19317;19879;22760	19360	19370	33000	33000					0.19872965947138255
LKFYLQKTR	9	Unmodified	_LKFYLQKTR_					0	0	0		ENST00000477797.1_1_7:143947564-143947660:+|nuORF	ENST00000477797.1_1_7:143947564-143947660:+|nuORF	ENST00000477797.1_1_7:143947564-143947660:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.861328125	2	598.861141	1195.70773	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.3	1	16.276	15.776	16.776	-0.024035								0	0	0	0.31828	1	130	130		24.203	3.2558	1				28939	12363	19361	19371	33001	33001					0.1177025956505986
LKGAIIIES	9	Unmodified	_LKGAIIIES_					0	0	0			REV__ENST00000476417.5_1_10:7615057-7659255:-|nuORF	REV__ENST00000476417.5_1_10:7615057-7659255:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2962951660156	2	472.294768	942.574983	-0.27988	-0.00013219	0.10119	4.7794E-05	-0.17868	-8.4392E-05	472.29457624012065	32.872	0.43057	32.817	32.539	32.969	-0.05434					16	9	2	0	0	0	0.7932	1	1961	1961		24.203	2.2429	1	33096	+		28940	18533	19362	19372	33002	33002					0.1013981510842541
LKGAILRMAF	10	Unmodified	_LKGAILRMAF_					0	0	0		nc|ENSG00000164506|Q5T5C0-3|STXBP5;nc|ENSG00000164506|Q5T5C0-2|STXBP5;ENSG00000164506|ENST00000321680|STXBP5	nc|ENSG00000164506|Q5T5C0-3|STXBP5	nc|ENSG00000164506|Q5T5C0-3|STXBP5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3416748046875	2	560.338987	1118.66342	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.88	1	104.07	103.57	104.57	0.18887								0	0	0	0.45132	1	12636	12636		27.882	5.9224	1				28941	5969	19363	19373	33003	33003					0.10883532147249753
LKGDHSRA	8	Unmodified	_LKGDHSRA_					0	0	0			REV__ENSG00000125746|ENST00000245925|EML2	REV__ENSG00000125746|ENST00000245925|EML2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2586975097656	2	442.240858	882.467164	0.84187	0.00037231	-1.1535	-0.00051014	-0.31166	-0.00013783	442.2401821813712	85.633	0.43369	85.559	85.407	85.841	-0.073761					12	9	2	0	0	0	0.4196	1	8786	8786		21.96	0	1	49583	+		28942	15707	19364	19374	33004	33004					0.021228632976999506
LKGDSARH	8	Unmodified	_LKGDSARH_					0	0	0			REV__nc|ENSG00000064655|O00167-3|EYA2	REV__nc|ENSG00000064655|O00167-3|EYA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24224853515625	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.88601	1	7256	7256		34.173	9.6685	1	716910	+		28943	16481	19365	19375	33005	33005					0.021228632976999506
LKGENLSKK	9	Unmodified	_LKGENLSKK_					0	0	0		ENST00000487720.1_1_7:26887667-26904048:-|nuORF;ENST00000497511.5_1_7:26786288-26904048:-|nuORF;ENST00000468712.5_1_7:26766479-26894483:-|nuORF;ENSG00000005020|ENST00000345317|SKAP2	ENST00000487720.1_1_7:26887667-26904048:-|nuORF	ENST00000487720.1_1_7:26887667-26904048:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.8077392578125	2	508.808574	1015.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.521	1	83.58	83.08	84.08	0.05925								0	0	0	0.28772	1	8400	8400		35.618	0	1				28944	672	19366	19376	33006	33006					0.09541718368666352
LKGFKLSSVP	10	Unmodified	_LKGFKLSSVP_					0	0	0			REV__ENSG00000130147|ENST00000392011|SH3BP4	REV__ENSG00000130147|ENST00000392011|SH3BP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3258056640625	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.86763	1	12744	12744		26.693	2.4902	1	4041000	+		28945	18848	19367	19377	33007	33007					0.10939479408148145
LKGICSVKKVH	11	Unmodified	_LKGICSVKKVH_					0	0	0			REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	606.3694458007812	2	606.368275	1210.722	-0.46368	-0.00028116	2.445	0.0014826	1.9813	0.0012014	606.3696540978959	94.435	3.8289	94.503	93.215	97.044	0.068336					198	90	3	0	0	0	0.74763	1	9810	9810		22.58	0.61977	1	750990	+		28946	29739	19368	19378	33008	33008					0.12506588721726075
LKGIKKVMA	9	Unmodified	_LKGIKKVMA_					0	0	0		ENSG00000167548|ENST00000301067|KMT2D;nc|ENSG00000167548|O14686-3|KMT2D	ENSG00000167548|ENST00000301067|KMT2D	ENSG00000167548|ENST00000301067|KMT2D	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.3009033203125	2	494.322805	986.631058	-0.83077	-0.00041067	-2.739	-0.0013539	-3.5697	-0.0017646	494.3212670860126	97.531	0.34611	97.531	97.249	97.595	0					12	7	2	0	0	0	0.20789	1	9754	9754		17.365	0	1	54323			28947	6301	19369	19379	33009	33009					0.13720744744239255
LKGILVPE	8	Unmodified	_LKGILVPE_					0	0	0			REV__nc|ENSG00000139880|Q86UP0|CDH24	REV__nc|ENSG00000139880|Q86UP0|CDH24	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.8823547363281	2	434.778754	867.542954	1.2158	0.00052862	2.2583	0.00098187	3.4742	0.0015105	434.7796169685632	32.528	0.62175	32.526	32.325	32.947	-0.0016365					23	14	2	0	0	0	0.4196	1	1837	1837		3.6843	0	1	30094	+		28948	19578	19370	19380	33010	33010					0.10388447425282266
LKGIPTVMA	9	Unmodified	_LKGIPTVMA_					0	0	0			REV__ENST00000589450.5_1_18:53745418-53763461:+|nuORF	REV__ENST00000589450.5_1_18:53745418-53763461:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.2797546386719	2	465.278063	928.541574	0.34135	0.00015882	3.9162	0.0018221	4.2576	0.0019809	465.2797316035461	88.798	1.7872	88.849	88.394	90.181	0.050415					106	41	4	0	0	0	0.78536	1	9157	9157		29.15	4.9468	1	1568700	+		28949	29160	19371	19381	33011	33011					0.07444490064870024
LKGKGIQYSL	10	Unmodified	_LKGKGIQYSL_					0	0	0		ENSG00000134769|ENST00000444659|DTNA;nc|ENSG00000134769|Q9Y4J8|DTNA;nc|ENSG00000134769|Q9Y4J8-4|DTNA;nc|ENSG00000134769|Q9Y4J8-11|DTNA;nc|ENSG00000134769|Q9Y4J8-3|DTNA	ENSG00000134769|ENST00000444659|DTNA	ENSG00000134769|ENST00000444659|DTNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.83056640625	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.86471	1	9454	9454		30.318	3.5216	1	5219600			28950	3957	19372	19382	33012	33012					0.10094577919812764
LKGKISKMYDK	11	Unmodified	_LKGKISKMYDK_					0	0	0			REV__nc|ENSG00000133112|P13693-2|TPT1	REV__nc|ENSG00000133112|P13693-2|TPT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.5870666503906	3	437.588207	1309.74279	0.048366	2.1165E-05	1.0541	0.00046125	1.1024	0.00048242	437.5884411335893	50.521	0.86349	50.969	50.641	51.504	0.44761					49	20	3	0	0	0	0.74344	1	4994	4994		23.514	0.13644	1	918220	+		28951	19058	19373	19383	33013	33013					0.10031134310725065
LKGKKLDFF	9	Unmodified	_LKGKKLDFF_					0	0	0		ENSG00000156920|ENST00000394143|ADGRG4	ENSG00000156920|ENST00000394143|ADGRG4	ENSG00000156920|ENST00000394143|ADGRG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.3289794921875	2	548.331685	1094.64882	-1.2886	-0.00070661	-2.5243	-0.0013841	-3.8129	-0.0020907	548.3301434974741	27.778	1.2267	27.681	27.316	28.542	-0.096945					87	28	5	0	0	0	0.31972	1	1607	1607		63.306	1.1989	1	1674600			28952	5401	19374	19384	33014	33014					0.10527783270754298
LKGKKVDQKIP	11	Unmodified	_LKGKKVDQKIP_					0	0	0			REV__ENSG00000180817|ENST00000373232|PPA1	REV__ENSG00000180817|ENST00000373232|PPA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.9391784667969	3	418.602845	1252.78671	2.3213	0.0009717	1.6325	0.00068335	3.9537	0.001655	418.6036475411712	49.177	2.7288	49.177	48.189	50.918	0.00016785					111	67	3	0	0	0	0.76579	1	4230	4230		18.531	0	1	107990	+		28953	22419	19375	19385	33015	33015					0.17042486799368817
LKGKMKVSYR	10	Unmodified	_LKGKMKVSYR_					0	0	0		ENSG00000112276|ENST00000314641|BVES	ENSG00000112276|ENST00000314641|BVES	ENSG00000112276|ENST00000314641|BVES	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.23138427734375	3	403.909392	1208.70635	-0.18725	-7.563E-05	-1.3795	-0.0005572	-1.5668	-0.00063283	403.90935457844006	84.752	0.30404	84.819	84.549	84.853	0.067169					9	6	2	0	0	0	0.37624	1	8442	8442		9.2118	1.4073	1	19778			28954	2647	19376	19386	33016	33016					0.11034302204689084
LKGLARPQ	8	Unmodified	_LKGLARPQ_					0	0	0		ENSG00000176571|ENST00000518476|CNBD1	ENSG00000176571|ENST00000518476|CNBD1	ENSG00000176571|ENST00000518476|CNBD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2535400390625	2	441.779619	881.544686	0.24434	0.00010794	-2.9891	-0.0013205	-2.7448	-0.0012126	441.7788701204355	22.264	0.12072	21.653	21.551	21.672	-0.6107					4	2	2	0	0	0	0.4196	1	883	883		3.6843	0.27433	1	10693			28955	7089	19377	19387	33017	33017					0.09917501233894654
LKGMKLSTL	9	Unmodified	_LKGMKLSTL_					0	0	0			REV__ENSG00000161509|ENST00000293190|GRIN2C	REV__ENSG00000161509|ENST00000293190|GRIN2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	495.80657958984375	2	495.804445	989.594338	0.71101	0.00035252	2.8258	0.0014011	3.5368	0.0017536	495.8059227129782	90.964	1.6419	91.118	90.679	92.321	0.15388					63	39	2	0	0	0	0.74721	1	9153	9153		37.159	3.6435	1	608980	+		28956	20765	19378	19388	33018	33018					0.09912448127693096
LKGPPMLGT	9	Unmodified	_LKGPPMLGT_					0	0	0			REV__nc|ENSG00000205683|Q92784-3|DPF3	REV__nc|ENSG00000205683|Q92784-3|DPF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26348876953125	2	457.262413	912.510274	1.9734	0.00090236	2.6334	0.0012042	4.6068	0.0021065	457.26345594794816	95.279	1.7323	95.222	94.723	96.455	-0.057533					88	40	3	0	0	0	0.74721	1	10184	10184		37.159	3.6435	1	826430	+		28957	30172	19379	19389	33019	33019					0.05051917030777986
LKGRGSSQ	8	Unmodified	_LKGRGSSQ_					0	0	0			REV__ENSG00000165841|ENST00000371321|CYP2C19	REV__ENSG00000165841|ENST00000371321|CYP2C19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7370300292969	2	416.735409	831.456264	-0.50287	-0.00020956	4.189	0.0017457	3.6861	0.0015361	416.73707926585416	38.454	0.98293	38.977	38.513	39.496	0.52235					52	23	3	0	0	0	0.87064	1	3164	3164		29.15	0	1	1833100	+		28958	21227	19380	19390	33020	33020					0.033794609234291784
LKGRRIGPIKP	11	Unmodified	_LKGRRIGPIKP_					0	0	0		nc|ENSG00000083544|Q9H7E2-2|TDRD3;chr13:60483846-60485802|46|13.52|0.65|4.38|+|ENST00000621840|TDRD3,TDRD3;nc|ENSG00000083544|Q9H7E2|TDRD3;ENSG00000083544|ENST00000377881|TDRD3;ENST00000471710.2_1_13:61103135-61109406:+|nuORF	nc|ENSG00000083544|Q9H7E2-2|TDRD3	nc|ENSG00000083544|Q9H7E2-2|TDRD3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2658996582031	3	412.275063	1233.80336	-0.59101	-0.00024366	-2.936	-0.0012105	-3.5271	-0.0014541	412.6075014135382	50.874	1.071	50.783	50.15	51.221	-0.091797					54	31	3	0	0	0	0.18238	1	4073	4073		1.2319	0	1	146050			28959	159	19381	19391	33021	33021					0.19581032475980464
LKGRRIGPIKP	11	Unmodified	_LKGRRIGPIKP_					0	0	0		nc|ENSG00000083544|Q9H7E2-2|TDRD3;chr13:60483846-60485802|46|13.52|0.65|4.38|+|ENST00000621840|TDRD3,TDRD3;nc|ENSG00000083544|Q9H7E2|TDRD3;ENSG00000083544|ENST00000377881|TDRD3;ENST00000471710.2_1_13:61103135-61109406:+|nuORF	nc|ENSG00000083544|Q9H7E2-2|TDRD3	nc|ENSG00000083544|Q9H7E2-2|TDRD3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	412.275063	1233.80336	-1.8832	-0.00077638	-2.4846	-0.0010244	-4.3678	-0.0018007	412.2740838668713	50.779	1.1489	50.809	49.867	51.016	0.029629	0.004239	0.00046217	NaN	2.8518	51	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72597			28960	159	19381	19391							0.19581032475980464
LKGRTWKPTL	10	Unmodified	_LKGRTWKPTL_					0	0	0		ENST00000484375.5_1_7:98972330-98988614:+|nuORF;ENST00000484600.6_1_7:98983337-98987636:+|nuORF;ENSG00000130429|ENST00000646101|ARPC1B	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5819396972656	3	400.580152	1198.71863	3.4046	0.0013638	-1.7319	-0.00069377	1.6727	0.00067005	400.91389036014743	114.35	0.33887	114.36	114.25	114.59	0.0094528					26	15	2	0	0	0	0.86446	1	13800	13800		30.569	5.4429	1	37392			28961	12537	19382	19392	33022	33022					0.12721661939372098
LKGRVALL	8	Unmodified	_LKGRVALL_					0	0	0		nc|ENSG00000149476|Q3LXA3-2|TKFC;ENSG00000149476|ENST00000394900|TKFC	nc|ENSG00000149476|Q3LXA3-2|TKFC	nc|ENSG00000149476|Q3LXA3-2|TKFC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30029296875	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.86791	1	7815	7815		28.254	0	1	6323600			28962	5028	19383	19393	33023	33023					0.14627262273359065
LKGTLVSAS	9	Unmodified	_LKGTLVSAS_					0	0	0			REV__nc|ENSG00000164251|P55085|F2RL1	REV__nc|ENSG00000164251|P55085|F2RL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2635192871094	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.7932	1	2945	2945		19.997	0.6368	1	22924000	+		28963	21056	19384	19394	33024	33024					0.07010669040232642
LKGWLPKSIIN	11	Unmodified	_LKGWLPKSIIN_					0	0	0		ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8933715820312	2	634.889898	1267.76524	-0.0080987	-5.1418E-06	3.0358	0.0019274	3.0277	0.0019223	634.8926566400073	107.77	0.43301	107.77	107.4	107.83	0					14	10	2	0	0	0	0.67778	1	11192	11192		35.152	10.633	1	10685000			28964	4905	19385	19395	33025	33025					0.14207101770671215
LKGWLPKSIIN	11	Unmodified	_LKGWLPKSIIN_					0	0	0		ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8934326171875	2	634.889898	1267.76524	-0.13084	-8.307E-05	4.2165	0.002677	4.0856	0.0025939	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.53361	3	11639	11627;11639;11675		49.536	13.089	1	40768000			28965	4905	19385	19395	33026;33027;33028	33027					0.14207101770671215
LKGWLPKSIIN	11	Unmodified	_LKGWLPKSIIN_					0	0	0		ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8931274414062	2	634.889898	1267.76524	1.3476	0.00085558	2.8664	0.0018198	4.214	0.0026754	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.66929	1	11693	11693		36.447	3.6343	1	42647000			28966	4905	19385	19395	33029	33029					0.14207101770671215
LKGWLPKSIIN	11	Unmodified	_LKGWLPKSIIN_					0	0	0		ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8933715820312	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.75	1	107.78	107.28	108.28	0.035622								0	0	0	0.56276	1	11839	11839		35.152	9.578	1				28967	4905	19385	19395	33030	33030					0.14207101770671215
LKGWLPKSIIN	11	Unmodified	_LKGWLPKSIIN_					0	0	0		ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8931884765625	2	634.889898	1267.76524	1.4999	0.00095225	2.3399	0.0014856	3.8398	0.0024378	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.51007	2	11407	11395;11407		51.193	13.381	1	68597000			28968	4905	19385	19395	33031;33032	33032					0.14207101770671215
LKGWLPKSIIN	11	Unmodified	_LKGWLPKSIIN_					0	0	0		ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	ENSG00000147465|ENST00000276449|STAR	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.892578125	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.67	1	105.85	105.35	106.35	0.18647								0	0	0	0.56276	1	12925	12925		51.193	6.8155	1				28969	4905	19385	19395	33033	33033					0.14207101770671215
LKHGHLPH	8	Unmodified	_LKHGHLPH_					0	0	0		ENST00000335997.11_1_X:129199166-129199613:-|nuORF	ENST00000335997.11_1_X:129199166-129199613:-|nuORF	ENST00000335997.11_1_X:129199166-129199613:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7720947265625	2	469.769586	937.524619	-1.0577	-0.00049687	4.4511	0.002091	3.3934	0.0015941	469.7715961982229	39.305	0.55652	39.316	39.081	39.637	0.010708					22	14	2	0	0	0	0.87807	1	2403	2403		31.579	1.0753	1	131260			28970	10164	19386	19396	33034	33034					0.0533575029394342
LKHIPIGRKLV	11	Unmodified	_LKHIPIGRKLV_					0	0	0			REV__chr2:174351725-174365562|14|11.71|0.71|4.04|-|1|TE_info:THE1B,THE1B_dup2678,ERVL-MaLR,LTR,donor,-,174365562,174365834|CIR1,None|3	REV__chr2:174351725-174365562|14|11.71|0.71|4.04|-|1|TE_info:THE1B,THE1B_dup2678,ERVL-MaLR,LTR,donor,-,174365562,174365834|CIR1,None|3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.77490234375	3	425.28708	1272.83941	0.18127	7.7093E-05	-3.7232	-0.0015834	-3.542	-0.0015063	425.285572518352	39.407	0.82529	39.495	39.186	40.011	0.088371					25	21	2	0	0	0	0.17911	1	2425	2425		13.508	6.8483	1	73132	+		28971	15739	19387	19397	33035	33035					0.21390489652821998
LKHIRKLAM	9	Unmodified	_LKHIRKLAM_					0	0	0			REV__ENST00000505007.5_1_5:138941211-138941858:+|nuORF	REV__ENST00000505007.5_1_5:138941211-138941858:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3529052734375	2	555.352428	1108.6903	0.85674	0.00047579	0.63766	0.00035412	1.4944	0.00082991	555.3526695275054	100.86	2.5278	101	100.46	102.99	0.14352					194	61	5	0	0	0	0.7932	1	10643	10643		24.203	1.1603	1	5097700	+		28972	27870	19388	19398	33036	33036					0.14030640758414847
LKHKGPPG	8	Unmodified	_LKHKGPPG_					0	0	0		nc|ENSG00000124313|Q5JU85-3|IQSEC2;ENSG00000124313|ENST00000642864|IQSEC2	nc|ENSG00000124313|Q5JU85-3|IQSEC2	nc|ENSG00000124313|Q5JU85-3|IQSEC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.73193359375	2	417.253237	832.491922	-0.33074	-0.000138	2.603	0.0010861	2.2722	0.0009481	417.2545019246098	32.508	0.70576	32.454	32.104	32.81	-0.05434					17	15	2	0	0	0	0.4196	1	1955	1955		20.482	5.8177	1	16731			28973	3329	19389	19399	33037	33037					0.06897543171089637
LKHKGPPG	8	Unmodified	_LKHKGPPG_					0	0	0		nc|ENSG00000124313|Q5JU85-3|IQSEC2;ENSG00000124313|ENST00000642864|IQSEC2	nc|ENSG00000124313|Q5JU85-3|IQSEC2	nc|ENSG00000124313|Q5JU85-3|IQSEC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2524108886719	2	417.253237	832.491922	-0.040205	-1.6776E-05	-0.42783	-0.00017851	-0.46804	-0.00019529	417.25296314698	35.536	1.154	35.476	35.254	36.408	-0.060333					58	32	2	0	0	0	0.81548	1	1918	1918		20.482	1.1219	1	236350			28974	3329	19389	19399	33038	33038					0.06897543171089637
LKHKGPPG	8	Unmodified	_LKHKGPPG_					0	0	0		nc|ENSG00000124313|Q5JU85-3|IQSEC2;ENSG00000124313|ENST00000642864|IQSEC2	nc|ENSG00000124313|Q5JU85-3|IQSEC2	nc|ENSG00000124313|Q5JU85-3|IQSEC2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	417.253237	832.491922	0.030055	1.2541E-05	0.9694	0.00040448	0.99945	0.00041703	417.2535942684864	32.304	0.48755	32.315	32.076	32.564	0.010902	-0.069424	-0.00055294	NaN	13.775	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21441			28975	3329	19389	19399							0.06897543171089637
LKHKVLERLVK	11	Unmodified	_LKHKVLERLVK_					0	0	0			REV__ENST00000511920.1_1_5:96514654-96518862:-|nuORF	REV__ENST00000511920.1_1_5:96514654-96518862:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	454.9668273925781	3	454.96964	1361.88709	-1.8593	-0.00084591	-4.1418	-0.0018844	-6.001	-0.0027303	454.96757125698684	40.933	1.0641	40.933	40.619	41.683	0					89	34	3	0	0	0	0.78083	1	2753	2753		15.337	3.4051	1	477130	+		28976	16440	19390	19400	33039	33039					0.2206214385300882
LKHKVLERLVK	11	Unmodified	_LKHKVLERLVK_					0	0	0			REV__ENST00000511920.1_1_5:96514654-96518862:-|nuORF	REV__ENST00000511920.1_1_5:96514654-96518862:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.7835693359375	3	454.96964	1361.88709	-1.8143	-0.00082543	-2.4901	-0.0011329	-4.3044	-0.0019584	455.3033251177133	42.449	0.52938	43.146	42.81	43.339	0.69754					15	12	2	0	0	0	0.181	1	3754	3754		3.026	0	1	165990	+		28977	16440	19390	19400	33040	33040					0.2206214385300882
LKHLCRLKIRR	11	Unmodified	_LKHLCRLKIRR_					0	0	0		ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.30865478515625	3	479.310002	1434.90818	-0.63549	-0.0003046	-1.5532	-0.00074449	-2.1887	-0.0010491	479.30917580991905	52.514	1.6934	52.49	51.325	53.018	-0.023849					51	40	2	0	0	0	0.79224	1	4512	4512		12.957	0.52465	1	106560			28978	4859	19391	19401	33041	33041					0.20811830680850107
LKHLCRLKIRR	11	Unmodified	_LKHLCRLKIRR_					0	0	0		ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3087158203125	3	479.310002	1434.90818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.639	1	47.612	47.112	48.112	-0.026737								0	0	0	0.56276	1	3983	3983		27.644	14.136	1				28979	4859	19391	19401	33042	33042					0.20811830680850107
LKHLCRLKIRR	11	Unmodified	_LKHLCRLKIRR_					0	0	0		ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27801513671875	3	479.310002	1434.90818	-0.84241	-0.00040378	-0.72409	-0.00034706	-1.5665	-0.00075084	479.3095619424776	80.678	0.21877	80.815	80.662	80.88	0.13702					5	4	2	0	0	0	0.17955	1	7695	7695		12.957	3.7457	1	36533			28980	4859	19391	19401	33043	33043					0.20811830680850107
LKHLCRLKIRR	11	Unmodified	_LKHLCRLKIRR_					0	0	0		ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9736022949219	3	479.310002	1434.90818	-0.70256	-0.00033674	-1.8169	-0.00087088	-2.5195	-0.0012076	479.3092804657743	60.507	0.66793	60.515	60.004	60.672	0.0081177					28	21	2	0	0	0	0.17835	1	5212	5212		11.932	5.9313	1	70087			28981	4859	19391	19401	33044	33044					0.20811830680850107
LKHLHPIV	8	Unmodified	_LKHLHPIV_					0	0	0			REV__nc|ENSG00000134444|Q9P260|RELCH	REV__nc|ENSG00000134444|Q9P260|RELCH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8052062988281	2	478.805637	955.596721	-1.7576	-0.00084154	2.8169	0.0013487	1.0593	0.0005072	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.86288	1	2648	2648		26.796	2.5934	1	336090	+		28982	19142	19392	19402	33045	33045					0.11714664647649897
LKHLHPIV	8	Unmodified	_LKHLHPIV_					0	0	0			REV__nc|ENSG00000134444|Q9P260|RELCH	REV__nc|ENSG00000134444|Q9P260|RELCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8055114746094	2	478.805637	955.596721	-1.2024	-0.0005757	2.6266	0.0012576	1.4242	0.00068191	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.82464	1	2853	2853		21.702	1.2205	1	361300	+		28983	19142	19392	19402	33046	33046					0.11714664647649897
LKHLHPIV	8	Unmodified	_LKHLHPIV_					0	0	0			REV__nc|ENSG00000134444|Q9P260|RELCH	REV__nc|ENSG00000134444|Q9P260|RELCH	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8045349121094	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.486	1	42.448	41.948	42.948	-0.038223								0	0	0	0.29353	1	3268	3268		28.254	7.7724	1		+		28984	19142	19392	19402	33047	33047					0.11714664647649897
LKHLNLSKTSL	11	Unmodified	_LKHLNLSKTSL_					0	0	0		nc|ENSG00000079691|Q5VZK9-3|CARMIL1;nc|ENSG00000079691|Q5VZK9-2|CARMIL1;ENSG00000079691|ENST00000329474|CARMIL1	nc|ENSG00000079691|Q5VZK9-3|CARMIL1	nc|ENSG00000079691|Q5VZK9-3|CARMIL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3842163085938	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.68532	1	12504	12504		33.922	4.7516	1	19815000			28985	1426	19393	19403	33048	33048					0.13405609902679316
LKHLRNSTM	9	Unmodified	_LKHLRNSTM_					0	0	0			REV__ENSG00000128011|ENST00000248668|LRFN1	REV__ENSG00000128011|ENST00000248668|LRFN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.3273315429688	2	550.305675	1098.5968	-0.58963	-0.00032447	0.60611	0.00033354	0.016482	9.0701E-06	550.306081028054	101.19	1.0993	101.22	100.44	101.53	0.031036					31	25	2	0	0	0	0.20789	1	10697	10697		20.947	3.582	1	53988	+		28986	18759	19394	19404	33049	33049					0.05144296585331176
LKHLSKVKKIP	11	Unmodified	_LKHLSKVKKIP_					0	0	0		nc|ENSG00000152595|Q9NQ76-2|MEPE;ENSG00000152595|ENST00000361056|MEPE;nc|ENSG00000152595|Q9NQ76-3|MEPE	nc|ENSG00000152595|Q9NQ76-2|MEPE	nc|ENSG00000152595|Q9NQ76-2|MEPE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.96002197265625	3	430.958852	1289.85473	-0.99486	-0.00042874	4.4806	0.001931	3.4857	0.0015022	430.96067868562477	39.832	1.6893	40.395	39.119	40.809	0.56301					124	39	4	0	0	0	0.82431	1	3357	3357		7.6794	0.27968	1	1723300			28987	5188	19395	19405	33050	33050					0.22139356450020387
LKHPNIITFK	10	Unmodified	_LKHPNIITFK_					0	0	0		nc|ENSG00000139625|Q12852|MAP3K12;ENSG00000139625|ENST00000547488|MAP3K12;ENST00000547020.1_1_12:53880221-53880452:-|nuORF	nc|ENSG00000139625|Q12852|MAP3K12	nc|ENSG00000139625|Q12852|MAP3K12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.8721923828125	2	605.868966	1209.72338	1.0692	0.00064779	4.1265	0.0025001	5.1957	0.0031479	605.8712819289403	100.09	1.5113	100.3	99.817	101.33	0.21512					93	35	4	0	0	0	0.85694	1	10410	10410		21.96	1.013	1	798340			28988	4383	19396	19406	33051	33051					0.12690546082103538
LKHRRKRQFKY	11	Unmodified	_LKHRRKRQFKY_					0	0	0			REV__ENSG00000214376|ENST00000409977|VSTM5	REV__ENSG00000214376|ENST00000409977|VSTM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	520.9848022460938	3	520.651304	1558.93208	-0.042901	-2.2336E-05	-2.8591	-0.0014886	-2.902	-0.0015109	520.9841774153862	108.42	1.2085	108.38	108.01	109.22	-0.042404					82	50	2	0	0	0	0.78683	2	11803	11797;11803		14.086	7.4264	1	1349000	+		28989	23652	19397	19407	33052;33053	33053					0.17497387438902479
LKHRRKRQFKY	11	Unmodified	_LKHRRKRQFKY_					0	0	0			REV__ENSG00000214376|ENST00000409977|VSTM5	REV__ENSG00000214376|ENST00000409977|VSTM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	520.6513061523438	3	520.651304	1558.93208	0.82298	0.00042849	-3.9656	-0.0020647	-3.1426	-0.0016362	520.6492150818826	108.41	1.2197	108.5	108.14	109.36	0.084412					99	51	3	0	0	0	0.80813	1	11637	11637		9.6461	3.3253	1	2123200	+		28990	23652	19397	19407	33054	33054					0.17497387438902479
LKHTNVVKRK	10	Unmodified	_LKHTNVVKRK_					0	0	0			REV__ENSG00000166004|ENST00000325212|CEP295	REV__ENSG00000166004|ENST00000325212|CEP295	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.26177978515625	3	408.262935	1221.76697	-2.164	-0.00088347	0.50216	0.00020501	-1.6618	-0.00067845	408.26298262341425	16.431	0.19321	16.431	16.337	16.53	0					15	9	2	0	0	0	0.85441	1	121	121		20.837	4.1198	1	53712	+		28991	21241	19398	19408	33055	33055					0.16496155579238803
LKHTVLVLTRK	11	Unmodified	_LKHTVLVLTRK_					0	0	0			REV__nc|ENSG00000069431|O60706|ABCC9	REV__nc|ENSG00000069431|O60706|ABCC9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.9346618652344	3	436.62224	1306.84489	0.4795	0.00020936	-2.3815	-0.0010398	-1.902	-0.00083047	436.6210757141986	20.236	0.9153	19.777	19.408	20.323	-0.4591					45	19	3	0	0	0	0.17504	1	648	648		19.627	14.214	1	319840	+		28992	16582	19399	19409	33056	33056					0.2037416844461859
LKIDGQQLAQ	10	Unmodified	_LKIDGQQLAQ_					0	0	0			REV__nc|ENSG00000188060|Q8N4Z0-1|RAB42	REV__nc|ENSG00000188060|Q8N4Z0-1|RAB42	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	557.3141479492188	2	557.316763	1112.61897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.294	1	21.683	21.183	22.183	-0.6107								0	0	0	0.45132	1	894	894		54.722	8.7704	1		+		28993	22975	19400	19410	33057	33057					0.06716799534751772
LKIEAAKLRQA	11	Unmodified	_LKIEAAKLRQA_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	414.26092529296875	3	414.262712	1239.76631	-1.9366	-0.00080227	0.12732	5.2745E-05	-1.8093	-0.00074953	414.2626627294579	18	0.43207	18.044	17.897	18.329	0.044048					55	22	3	0	0	0	0.47591	1	289	289		53.597	15.997	1	474120			28994	7058	19401	19411	33058	33058					0.15601316139532173
LKIEAAKLRQA	11	Unmodified	_LKIEAAKLRQA_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	414.262712	1239.76631	-2.1639	-0.00089641	0.49946	0.00020691	-1.6644	-0.00068951	414.26298114548484	18.073	0.34813	18.073	17.893	18.241	0	0.036829	0.0022713	NaN	53.597	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57397			28995	7058	19401	19411							0.15601316139532173
LKIEAAKLRQA	11	Unmodified	_LKIEAAKLRQA_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	414.262712	1239.76631	0.9117	0.00037768	-3.1598	-0.001309	-2.2481	-0.0009313	414.5961034597898	17.939	0.32521	18.014	17.867	18.192	0.075443	-0.021538	-0.0022764	NaN	53.597	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11265			28996	7058	19401	19411							0.15601316139532173
LKIEAAKLRQA	11	Unmodified	_LKIEAAKLRQA_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	414.262712	1239.76631	-0.40517	-0.00016784	-2.3083	-0.00095626	-2.7135	-0.0011241	414.2615173659244	18.185	0.15716	18.108	18.069	18.227	-0.07671	0.071983	-0.0012182	NaN	53.597	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12354			28997	7058	19401	19411							0.15601316139532173
LKIEAAKLRQA	11	Unmodified	_LKIEAAKLRQA_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	414.262712	1239.76631	2.927	0.0012126	-5.3404	-0.0022123	-2.4134	-0.00099977	414.59497009307785	18.226	0.22721	18.147	17.977	18.204	-0.078943	0.11132	-0.0049865	NaN	53.597	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21047			28998	7058	19401	19411							0.15601316139532173
LKIKKLTQNHT	11	Unmodified	_LKIKKLTQNHT_					0	0	0		L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|156|3|sense	L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|156|3|sense	L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|156|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.9391784667969	3	441.94175	1322.80342	-0.1083	-4.7863E-05	-4.2447	-0.0018759	-4.353	-0.0019238	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.73647	1	4850	4850		25.068	1.6899	1	447080			28999	14649	19402	19412	33059	33059					0.15492987685320259
LKIKKSLVF	9	Unmodified	_LKIKKSLVF_					0	0	0			REV__ENST00000377818.3_1_13:73283791-73283884:-|nuORF	REV__ENST00000377818.3_1_13:73283791-73283884:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3269653320312	2	538.365527	1074.7165	0.83984	0.00045214	3.4703	0.0018683	4.3101	0.0023204	538.3666401303512	100.78	0.40336	100.92	100.69	101.09	0.14352					16	9	3	0	0	0	0.20789	1	10560	10560		6.7355	0	1	175110	+		29000	25875	19403	19413	33060	33060					0.18213233201549883
LKIKYPHQ	8	Unmodified	_LKIKYPHQ_					0	0	0		ENST00000472011.5_1_1:235582749-235612074:+|nuORF;nc|ENSG00000285053|Q15813|TBCE;nc|ENSG00000285053|Q15813-2|TBCE;ENST00000465463.1_1_1:235605175-235611824:+|nuORF	ENST00000472011.5_1_1:235582749-235612074:+|nuORF	ENST00000472011.5_1_1:235582749-235612074:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8087768554688	2	513.808377	1025.6022	-0.49115	-0.00025236	1.4357	0.00073767	0.94454	0.00048531	513.8089618478288	47.549	2.118	48.472	47.871	49.989	0.92315					109	52	4	0	0	0	0.90465	1	4552	4552		40.573	8.6178	1	2805200			29001	12252	19404	19414	33061	33061					0.0904234343945518
LKILEKVC	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LKILEKVC_					1	0	0			REV__chr22:45740538-45798612|23|24.17|0.31|6.3|+|2|TE_info:L1ME1,L1ME1_dup30767,L1,LINE,acceptor,+,45798612,45799075|ATXN10,None|6	REV__chr22:45740538-45798612|23|24.17|0.31|6.3|+|2|TE_info:L1ME1,L1ME1_dup30767,L1,LINE,acceptor,+,45798612,45799075|ATXN10,None|6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.30059814453125	2	494.298996	986.583439	2.3073	0.0011405	1.1641	0.0005754	3.4713	0.0017159	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.90465	1	10558	10558		40.573	7.057	1	53958000	+		29002	15790	19405	19415	33062	33062					0.08961045753392227
LKILSKKMA	9	Unmodified	_LKILSKKMA_					0	0	0		ENST00000341060.3_1_6:24658840-24658948:-|nuORF	ENST00000341060.3_1_6:24658840-24658948:-|nuORF	ENST00000341060.3_1_6:24658840-24658948:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3135986328125	2	516.335913	1030.65727	-0.68219	-0.00035224	-0.66653	-0.00034415	-1.3487	-0.00069639	516.3353171554321	99.613	0.41543	99.613	99.472	99.887	0					15	9	3	0	0	0	0.20789	1	10102	10102		15.642	7.9515	1	233210			29003	10240	19406	19416	33063	33063					0.1431701391570641
LKIMEIHIGVL	11	Unmodified	_LKIMEIHIGVL_					0	0	0		ENST00000440959.2_1_1:180243108-180243874:-|nuORF	ENST00000440959.2_1_1:180243108-180243874:-|nuORF	ENST00000440959.2_1_1:180243108-180243874:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3837280273438	2	633.386134	1264.75771	-0.76688	-0.00048573	-0.44468	-0.00028165	-1.2116	-0.00076739	633.3857297307702	51.44	1.7579	51.44	50.814	52.572	0					77	46	2	0	0	0	0.75121	1	4241	4241		18.262	5.4504	1	76099			29004	11778	19407	19417	33064	33064					0.13592626178706269
LKIMVPRT	8	Unmodified	_LKIMVPRT_					0	0	0		ENSG00000117528|ENST00000370214|ABCD3;nc|ENSG00000117528|P28288-2|ABCD3;nc|ENSG00000117528|P28288-3|ABCD3	ENSG00000117528|ENST00000370214|ABCD3	ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.29718017578125	2	479.29933	956.584108	-0.25174	-0.00012066	-3.0868	-0.0014795	-3.3385	-0.0016001	479.2977080659384	57.467	1.4488	58.023	57.642	59.091	0.55512					79	35	4	0	0	0	0.91472	1	6031	6031		44.117	6.9577	1	5116300			29005	2985	19408	19418	33065	33065					0.10407885193103539
LKINGSRDLLI	11	Unmodified	_LKINGSRDLLI_					0	0	0			REV__ENST00000538465.7_1_17:11998906-12043167:+|nuORF	REV__ENST00000538465.7_1_17:11998906-12043167:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.59130859375	3	414.590717	1240.75032	0.73309	0.00030393	0.82463	0.00034188	1.5577	0.00064582	414.5908881291252	32.401	0.76654	32.508	32.189	32.956	0.10707					47	17	4	0	0	0	0.61824	1	2275	2275		42.338	2.4649	1	854600	+		29006	16505	19409	19419	33066	33066					0.1395760990267263
LKIPELVLFSD	11	Unmodified	_LKIPELVLFSD_					0	0	0			REV__nc|ENSG00000196166|Q6ZUL3|LINC03042	REV__nc|ENSG00000196166|Q6ZUL3|LINC03042	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	637.3685302734375	2	637.373746	1272.73294	-1.1676	-0.00074419	-3.8355	-0.0024447	-5.0031	-0.0031889	637.3712208846088	105.62	2.2472	105.69	104.93	107.17	0.07312					175	54	4	0	0	0	0.67778	1	11218	11218		35.152	10.633	1	2485300	+		29007	30123	19410	19420	33067	33067					0.10748269576993152
LKIPIRRR	8	Unmodified	_LKIPIRRR_					0	0	0			REV__nc|ENSG00000105879|Q75N03-2|CBLL1	REV__nc|ENSG00000105879|Q75N03-2|CBLL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.360595703125	2	526.364185	1050.71382	-1.5421	-0.00081169	-4.0982	-0.0021571	-5.6402	-0.0029688	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.82419	1	2265	2265		13.775	0	1	788470	+		29008	17580	19411	19421	33068	33068					0.1904882258725138
LKIRIIAPPKR	11	Unmodified	_LKIRIIAPPKR_					0	0	0		ENSG00000196834|ENST00000451531|POTEI	ENSG00000196834|ENST00000451531|POTEI	ENSG00000196834|ENST00000451531|POTEI	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7797546386719	3	435.63448	1303.88161	-1.4003	-0.00061004	-3.8474	-0.0016761	-5.2478	-0.0022861	435.9674668800193	41.738	0.42701	42.372	42.28	42.707	0.6339					15	10	2	0	0	0	0.17955	1	3729	3729		5.4129	2.2016	1	96470			29009	8106	19412	19422	33069	33069					0.24182465061198855
LKISHLQHGSF	11	Unmodified	_LKISHLQHGSF_					0	0	0			REV__ENST00000258526.8_1_12:94699610-94699751:+|nuORF	REV__ENST00000258526.8_1_12:94699610-94699751:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.369140625	2	633.851304	1265.68806	-1.1794	-0.00074755	-0.082679	-5.2406E-05	-1.2621	-0.00079996	633.8508193593559	97.827	0.21967	98.023	97.891	98.111	0.19584					6	4	2	0	0	0	0.17387	1	10076	10076		30.318	10.287	1	41647	+		29010	24356	19413	19423	33070	33070					0.06583883554299064
LKIVIVKHTID	11	Unmodified	_LKIVIVKHTID_					0	0	0		MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|186|2|anti-sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|186|2|anti-sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|186|2|anti-sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.30267333984375	3	426.942979	1277.80711	0.40026	0.00017089	3.1594	0.0013489	3.5597	0.0015198	426.9438865676537	63.752	0.25982	63.875	63.77	64.03	0.12252					10	8	2	0	0	0	0.17729	1	5602	5602		8.7993	3.6569	1	26757			29011	14710	19414	19424	33071	33071					0.1793165745918941
LKKADGKLVVE	11	Unmodified	_LKKADGKLVVE_					0	0	0			REV__ENSG00000133874|ENST00000256257|RNF122	REV__ENSG00000133874|ENST00000256257|RNF122	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.53973388671875	3	400.583451	1198.72852	2.8195	0.0011294	-1.4347	-0.00057471	1.3848	0.00055472	400.58284711593865	24.711	0.82143	24.674	24.297	25.118	-0.037178					47	17	3	0	0	0	0.1747	1	903	903		27.644	0	1	68143	+		29012	19101	19415	19425	33072	33072					0.1371080515407357
LKKAMVPAR	9	Oxidation (M)	_LKKAM(Oxidation (M))VPAR_		LKKAM(1)VPAR		LKKAM(44)VPAR	0	0	1		ENST00000376673.7_1_13:98009748-98017404:+|nuORF	ENST00000376673.7_1_13:98009748-98017404:+|nuORF	ENST00000376673.7_1_13:98009748-98017404:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3159790039062	2	515.315512	1028.61647	0.58613	0.00030204	1.0873	0.00056033	1.6735	0.00086237	515.3156734656603	22.644	1.1835	22.034	21.745	22.928	-0.6107					52	28	3	0	0	0	0.64922	1	945	945		44.117	8.4985	1	271940			29013	10821	19416	19426	33073	33073		177			0.10330672596091972
LKKANWPE	8	Unmodified	_LKKANWPE_					0	0	0		ENST00000264245.8_2_3:119087340-119101152:+|nuORF	ENST00000264245.8_2_3:119087340-119101152:+|nuORF	ENST00000264245.8_2_3:119087340-119101152:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.78985595703125	2	493.276909	984.539266	-0.83745	-0.00041309	0.85846	0.00042346	0.021015	1.0366E-05	493.2772993909306	31.87	0.59833	31.997	31.604	32.203	0.12643					21	13	2	0	0	0	0.4196	1	2176	2176		0.82809	0	1	158780			29014	9476	19417	19427	33074	33074					0.046377776514077595
LKKARIHPF	9	Unmodified	_LKKARIHPF_					0	0	0		nc|ENSG00000116747|P10155-3|RO60;chr1:193085040-193091651|60|25.2|0.49|5.68|+|ENST00000367443|RO60,RO60;nc|ENSG00000116747|P10155-5|RO60;chr1:193084657-193091651|60|25.2|0.66|5.25|+|ENST00000367444|RO60,RO60;nc|ENSG00000116747|P10155-4|RO60;ENSG00000116747|ENST00000400968|RO60	nc|ENSG00000116747|P10155-3|RO60	nc|ENSG00000116747|P10155-3|RO60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3529663085938	2	555.350743	1108.68693	0.32258	0.00017915	4.121	0.0022886	4.4436	0.0024677	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.7932	1	10532	10532		17.365	0.89182	1	7708500			29015	35	19418	19428	33075	33075					0.13693713976067556
LKKARKSI	8	Unmodified	_LKKARKSI_					0	0	0			REV__nc|ENSG00000012171|Q13214-2|SEMA3B	REV__nc|ENSG00000012171|Q13214-2|SEMA3B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28741455078125	2	472.324194	942.633835	-0.91877	-0.00043396	1.4025	0.00066242	0.4837	0.00022846	472.3242156001577	95.104	0.64925	95.335	95.026	95.675	0.23103					24	15	2	0	0	0	0.4196	1	9772	9772		11.511	0	1	468190	+		29016	16189	19419	19429	33076	33076					0.16022336193407227
LKKARREP	8	Unmodified	_LKKARREP_					0	0	0		ENSG00000278803|ENST00000458091|PWWP4	ENSG00000278803|ENST00000458091|PWWP4	ENSG00000278803|ENST00000458091|PWWP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.2142028808594	2	499.3169	996.619247	2.1937	0.0010954	0.25878	0.00012921	2.4525	0.0012246	499.31691877624115	100.39	0.44504	100.74	100.53	100.98	0.3459					20	10	2	0	0	0	0.4196	1	12178	12178		37.159	0	1	109890			29017	9035	19420	19430	33077	33077					0.12080264045266631
LKKASVIPTLQ	11	Unmodified	_LKKASVIPTLQ_					0	0	0		ENSG00000198646|ENST00000359003|NCOA6	ENSG00000198646|ENST00000359003|NCOA6	ENSG00000198646|ENST00000359003|NCOA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.3789672851562	2	599.381906	1196.74926	-0.54345	-0.00032574	-2.532	-0.0015176	-3.0754	-0.0018434	599.3802252506414	103.57	3.0198	103.57	103.18	106.2	-0.0035782					175	72	5	0	0	0	0.66929	1	11243	11243		36.447	0.82846	1	11998000			29018	8300	19421	19431	33078	33078					0.15875395533748815
LKKASVIPTLQ	11	Unmodified	_LKKASVIPTLQ_					0	0	0		ENSG00000198646|ENST00000359003|NCOA6	ENSG00000198646|ENST00000359003|NCOA6	ENSG00000198646|ENST00000359003|NCOA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3800048828125	2	599.381906	1196.74926	-1.2913	-0.00077396	-1.7358	-0.0010404	-3.0271	-0.0018144	599.3806932084216	103.36	2.8938	103.47	103.07	105.96	0.11494					245	72	6	0	0	0	0.72739	1	10841	10841		27.047	0.3544	1	20299000			29019	8300	19421	19431	33079	33079					0.15875395533748815
LKKAVKKAHDN	11	Unmodified	_LKKAVKKAHDN_					0	0	0			REV__ENST00000552481.2_1_12:77377861-77378056:-|nuORF	REV__ENST00000552481.2_1_12:77377861-77378056:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.381591796875	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.7	1	117.62	117.12	118.12	-0.088509								0	0	0	0.56276	1	12673	12673		22.58	0	1		+		29020	28627	19422	19432	33080	33080					0.13056145479754377
LKKCLRFLFFI	11	Unmodified	_LKKCLRFLFFI_					0	0	0			REV__nc|ENSG00000104450|Q07617-2|SPAG1	REV__nc|ENSG00000104450|Q07617-2|SPAG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6239929199219	3	476.624704	1426.85228	-1.6911	-0.000806	-0.40616	-0.00019358	-2.0972	-0.00099958	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.80813	1	12254	12254		9.6461	0.43434	1	2577100	+		29021	29753	19423	19433	33081	33081					0.15593184720682984
LKKCTPIQKY	10	Unmodified	_LKKCTPIQKY_					0	0	0		nc|ENSG00000170379|A6NFQ2-3|TCAF2	nc|ENSG00000170379|A6NFQ2-3|TCAF2	nc|ENSG00000170379|A6NFQ2-3|TCAF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3548583984375	2	611.354834	1220.69511	2.1766	0.0013307	-0.33396	-0.00020417	1.8427	0.0011265	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.64457	2	10031	10007;10031		47.657	9.8458	1	5823000			29022	15088	19424	19434	33082;33083	33083					0.09359480110538243
LKKDKLIEQH	10	Unmodified	_LKKDKLIEQH_					0	0	0			REV__ENSG00000159307|ENST00000360835|SCUBE1;REV__ENSG00000146197|ENST00000274938|SCUBE3;REV__nc|ENSG00000175356|Q9NQ36-2|SCUBE2	REV__ENSG00000146197|ENST00000274938|SCUBE3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3201904296875	2	626.374612	1250.73467	1.2989	0.00081363	4.3594	0.0027306	5.6584	0.0035443	626.379126120604	61.841	0.10509	61.948	61.862	61.967	0.10743					5	3	2	0	0	0	0.37624	1	5373	5373		11.097	4.7841	1	93260	+		29023	19992;20651;22064	19425	19435	33084	33084					0.1193332338559685
LKKDKSQKT	9	Unmodified	_LKKDKSQKT_					0	0	0			REV__ENSG00000164252|ENST00000312916|AGGF1	REV__ENSG00000164252|ENST00000312916|AGGF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3273315429688	2	538.327131	1074.63971	1.8602	0.0010014	-2.2278	-0.0011993	-0.3676	-0.00019789	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.7932	1	12335	12335		25.574	0.12388	1	19391000	+		29024	21057	19426	19436	33085	33085					0.10537389914406958
LKKDPKPSVSR	11	Unmodified	_LKKDPKPSVSR_					0	0	0		nc|ENSG00000130479|Q66K74-2|MAP1S;ENSG00000130479|ENST00000324096|MAP1S	nc|ENSG00000130479|Q66K74-2|MAP1S	nc|ENSG00000130479|Q66K74-2|MAP1S	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8792114257812	2	627.880062	1253.74557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.74	1	115.73	115.23	116.23	-0.016441								0	0	0	0.56276	1	13913	13913		27.047	2.5281	1				29025	3647	19427	19437	33086	33086					0.1288472575988635
LKKDRVETT	9	Unmodified	_LKKDRVETT_					0	0	0			REV__ENST00000482459.1_1_11:1756512-1769373:-|nuORF	REV__ENST00000482459.1_1_11:1756512-1769373:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.31689453125	2	545.316763	1088.61897	0.15103	8.2357E-05	-0.42604	-0.00023233	-0.27501	-0.00014997	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.78058	1	8651	8651		30.504	0	1	5755000	+		29026	27466	19428	19438	33087	33087					0.07820799534761136
LKKEEPHLL	9	Unmodified	_LKKEEPHLL_					0	0	0		nc|ENSG00000130038|Q9BSW2-1|CRACR2A;ENSG00000130038|ENST00000440314|CRACR2A	nc|ENSG00000130038|Q9BSW2-1|CRACR2A	nc|ENSG00000130038|Q9BSW2-1|CRACR2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8304443359375	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.69624	1	9273	9273		40.778	5.1599	1	6029400			29027	3618	19429	19439	33088	33088					0.10094577919812764
LKKEEPHLL	9	Unmodified	_LKKEEPHLL_					0	0	0		nc|ENSG00000130038|Q9BSW2-1|CRACR2A;ENSG00000130038|ENST00000440314|CRACR2A	nc|ENSG00000130038|Q9BSW2-1|CRACR2A	nc|ENSG00000130038|Q9BSW2-1|CRACR2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8298950195312	2	553.832049	1105.64954	-1.2274	-0.00067979	-2.3284	-0.0012895	-3.5558	-0.0019693	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.78058	1	10430	10430		30.504	1.3336	1	1825600			29028	3618	19429	19439	33089	33089					0.10094577919812764
LKKEEPHLL	9	Unmodified	_LKKEEPHLL_					0	0	0		nc|ENSG00000130038|Q9BSW2-1|CRACR2A;ENSG00000130038|ENST00000440314|CRACR2A	nc|ENSG00000130038|Q9BSW2-1|CRACR2A	nc|ENSG00000130038|Q9BSW2-1|CRACR2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8304443359375	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.64922	1	10732	10732		44.117	6.9577	1	5911200			29029	3618	19429	19439	33090	33090					0.10094577919812764
LKKEFIFRTT	10	Unmodified	_LKKEFIFRTT_					0	0	0			REV__nc|ENSG00000176915|Q86XL3-2|ANKLE2	REV__nc|ENSG00000176915|Q86XL3-2|ANKLE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8822021484375	2	641.87953	1281.74451	0.91411	0.00058675	3.6201	0.0023236	4.5342	0.0029104	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.8651	1	10052	10052		25.574	2.0514	1	4136300	+		29030	22156	19430	19440	33091	33091					0.11490511390979918
LKKEKLMA	8	Unmodified	_LKKEKLMA_					0	0	0			REV__ENSG00000181378|ENST00000341552|CFAP65	REV__ENSG00000181378|ENST00000341552|CFAP65	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.8009033203125	2	480.799163	959.583773	2.0445	0.00098299	1.3323	0.00064055	3.3768	0.0016235	480.7997098356697	95.287	4.3541	95.23	94.639	98.993	-0.057526					326	101	5	0	0	0	0.89043	1	10357	10357		35.618	1.4457	1	19210000	+		29031	22454	19431	19441	33092	33092					0.10236465473246881
LKKEKQEREER	11	Unmodified	_LKKEKQEREER_					0	0	0		ENST00000508482.5_1_17:48797176-48828101:+|nuORF;ENSG00000108848|ENST00000505658|LUC7L3	ENST00000508482.5_1_17:48797176-48828101:+|nuORF	ENST00000508482.5_1_17:48797176-48828101:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79937744140625	3	491.61084	1471.81069	0.46625	0.00022921	4.4202	0.002173	4.8865	0.0024022	491.61301774207016	64.38	0.74183	64.504	64.057	64.799	0.12397					38	28	2	0	0	0	0.17807	1	5621	5621		18.966	7.9681	1	102790			29032	2437	19432	19442	33093	33093					0.09365675495064352
LKKELRVKLE	10	Unmodified	_LKKELRVKLE_					0	0	0		ENSG00000168924|ENST00000302787|LETM1;ENST00000512669.1_1_4:1836565-1841051:-|nuORF;nc|ENSG00000168924|O95202-2|LETM1;ENST00000505551.5_1_4:1836565-1844755:-|nuORF;nc|ENSG00000168924|O95202-3|LETM1;ENST00000466175.5_1_4:1836565-1857677:-|nuORF	ENSG00000168924|ENST00000302787|LETM1	ENSG00000168924|ENST00000302787|LETM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2265319824219	3	419.274729	1254.80236	-1.8082	-0.00075812	3.2449	0.0013605	1.4367	0.00060238	419.27635778467857	75.466	0.19711	75.592	75.444	75.641	0.12545					5	4	2	0	0	0	0.37624	1	7018	7018		13.508	0	1	28356			29033	6452	19433	19443	33094	33094					0.1851477331638307
LKKELSVAM	9	Unmodified	_LKKELSVAM_					0	0	0			REV__ENSG00000102468|ENST00000542664|HTR2A	REV__ENSG00000102468|ENST00000542664|HTR2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80377197265625	2	509.801903	1017.58925	-0.054339	-2.7702E-05	3.6212	0.0018461	3.5668	0.0018184	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.78058	1	8680	8680		30.504	2.6214	1	2906900	+		29034	17342	19434	19444	33095	33095					0.08116144265056846
LKKELSVAM	9	Unmodified	_LKKELSVAM_					0	0	0			REV__ENSG00000102468|ENST00000542664|HTR2A	REV__ENSG00000102468|ENST00000542664|HTR2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.80352783203125	2	509.801903	1017.58925	1.253	0.0006388	2.312	0.0011787	3.5651	0.0018175	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.72402	1	9022	9022		38.806	3.1879	1	3243500	+		29035	17342	19434	19444	33096	33096					0.08116144265056846
LKKELSVAM	9	Unmodified	_LKKELSVAM_					0	0	0			REV__ENSG00000102468|ENST00000542664|HTR2A	REV__ENSG00000102468|ENST00000542664|HTR2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.80426025390625	2	509.801903	1017.58925	0.22319	0.00011378	3.3375	0.0017014	3.5607	0.0018152	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.69624	3	8677	8677;8712;8891		40.778	5.5774	1	3453000	+		29036	17342	19434	19444	33097;33098;33099	33097					0.08116144265056846
LKKELSVAM	9	Unmodified	_LKKELSVAM_					0	0	0			REV__ENSG00000102468|ENST00000542664|HTR2A	REV__ENSG00000102468|ENST00000542664|HTR2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8033752441406	2	509.801903	1017.58925	-0.37726	-0.00019233	3.8775	0.0019768	3.5002	0.0017844	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.62081	5	8578	8375;8411;8435;8530;8578		45.952	2.9866	1	3415500	+		29037	17342	19434	19444	33100;33101;33102;33103;33104	33104					0.08116144265056846
LKKFGRSF	8	Unmodified	_LKKFGRSF_					0	0	0		ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7964782714844	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.286	1	66.413	65.913	66.913	0.12649								0	0	0	0.29498	1	5883	5883		26.796	1.3459	1				29038	6488	19435	19445	33105	33105					0.08446074267999393
LKKFIKIA	8	Unmodified	_LKKFIKIA_					0	0	0		nc|ENSG00000091428|Q8WZA2-2|RAPGEF4;nc|ENSG00000091428|Q8WZA2-5|RAPGEF4;nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;ENSG00000091428|ENST00000397081|RAPGEF4;ENST00000545893.5_1_17:38345052-38350037:+|nuORF;nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1;nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1;nc|ENSG00000108352|Q9UHV5|RAPGEFL1;ENSG00000108352|ENST00000620260|RAPGEFL1	nc|ENSG00000091428|Q8WZA2-2|RAPGEF4;ENST00000545893.5_1_17:38345052-38350037:+|nuORF	nc|ENSG00000091428|Q8WZA2-2|RAPGEF4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8007507324219	2	480.833863	959.653173	0.73328	0.00035259	-1.5372	-0.00073914	-0.80393	-0.00038656	480.83195498020245	95.251	0.44261	95.414	95.031	95.473	0.16307					15	10	2	0	0	0	0.4196	1	9722	9722		8.2313	0	1	96024			29039	1676;2400	19436	19446	33106	33106					0.17173292484301328
LKKFTKLST	9	Unmodified	_LKKFTKLST_					0	0	0			REV__L1MA3_dup7701|chr15:44349277-44351294:+|1.4292787336965462|0.1492014457220858|3.26|63.0|29|2|sense	REV__L1MA3_dup7701|chr15:44349277-44351294:+|1.4292787336965462|0.1492014457220858|3.26|63.0|29|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.3400268554688	2	533.336967	1064.65938	3.0971	0.0016518	2.9068	0.0015503	6.0039	0.0032021	533.3384140007198	99.339	2.8367	99.285	98.69	101.53	-0.053741					182	66	5	0	0	0	0.7932	1	10768	10768		21.96	0	1	3163800	+		29040	29476	19437	19447	33107	33107					0.1296376592517845
LKKGRRGKGPG	11	Unmodified	_LKKGRRGKGPG_					0	0	0		ENST00000397311.4_1_6:15410511-15452304:+|nuORF	ENST00000397311.4_1_6:15410511-15452304:+|nuORF	ENST00000397311.4_1_6:15410511-15452304:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	577.3681640625	2	577.367456	1152.72036	0.74115	0.00042792	-2.508	-0.0014481	-1.7669	-0.0010201	577.3658570064985	102.18	2.9839	102.23	101.81	104.79	0.043198					214	72	5	0	0	0	0.72918	1	11158	11158		26.693	2.4902	1	10154000			29041	11145	19438	19448	33108	33108					0.1501071574798516
LKKGRRGKGPG	11	Unmodified	_LKKGRRGKGPG_					0	0	0		ENST00000397311.4_1_6:15410511-15452304:+|nuORF	ENST00000397311.4_1_6:15410511-15452304:+|nuORF	ENST00000397311.4_1_6:15410511-15452304:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3662109375	2	577.367456	1152.72036	0.64818	0.00037424	-2.4151	-0.0013944	-1.7669	-0.0010202	577.3659582171192	102.04	3.0704	102.23	101.84	104.91	0.19484					206	76	5	0	0	0	0.75495	1	10789	10789		20.947	2.6848	1	17266000			29042	11145	19438	19448	33109	33109					0.1501071574798516
LKKGSGRDI	9	Unmodified	_LKKGSGRDI_					0	0	0			REV__ENST00000513637.1_1_5:43495177-43495438:-|nuORF	REV__ENST00000513637.1_1_5:43495177-43495438:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.2937927246094	2	487.293091	972.571629	-1.6564	-0.00080713	1.8268	0.00089018	0.17042	8.3045E-05	487.29386636791077	90.875	2.2933	91.055	90.557	92.85	0.18029					120	54	3	0	0	0	0.77244	1	9151	9151		32.812	2.3088	1	1353600	+		29043	27994	19439	19449	33110	33110					0.08424565054417599
LKKGSSAI	8	Unmodified	_LKKGSSAI_					0	0	0			REV__ENST00000342992.10_3_2:179416458-179416575:-|nuORF	REV__ENST00000342992.10_3_2:179416458-179416575:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.25262451171875	2	402.252903	802.491253	0.012695	5.1066E-06	-0.92253	-0.00037109	-0.90984	-0.00036598	402.25241799368695	20.158	0.44477	20.234	20.057	20.502	0.075848					34	22	2	0	0	0	0.79929	1	478	478		18.324	0.95945	1	276350	+		29044	25285	19440	19450	33111	33111					0.08210703731356261
LKKGSSAI	8	Unmodified	_LKKGSSAI_					0	0	0			REV__ENST00000342992.10_3_2:179416458-179416575:-|nuORF	REV__ENST00000342992.10_3_2:179416458-179416575:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	402.252903	802.491253	0.88196	0.00035477	-1.6971	-0.00068265	-0.81512	-0.00032788	402.252133712488	19.932	0.3994	20.004	19.767	20.166	0.071127	-0.11396	-0.00053216	NaN	18.324	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40069	+		29045	25285	19440	19450							0.08210703731356261
LKKGYTILI	9	Unmodified	_LKKGYTILI_					0	0	0			REV__nc|ENSG00000177752|Q8N8F6-4|YIPF7	REV__nc|ENSG00000177752|Q8N8F6-4|YIPF7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.826904296875	2	524.841885	1047.66922	-0.1343	-7.0487E-05	2.7226	0.0014289	2.5883	0.0013584	524.8435613421507	99.028	0.90745	99.251	98.877	99.785	0.22263					32	21	2	0	0	0	0.20789	1	10253	10253		45.952	13.997	1	245880	+		29046	30058	19441	19451	33112	33112					0.1472895393055751
LKKGYTILI	9	Unmodified	_LKKGYTILI_					0	0	0			REV__nc|ENSG00000177752|Q8N8F6-4|YIPF7	REV__nc|ENSG00000177752|Q8N8F6-4|YIPF7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8267211914062	2	524.841885	1047.66922	0.81141	0.00042586	4.1609	0.0021838	4.9723	0.0026097	524.8432874713677	98.98	0.52785	99.137	98.948	99.475	0.15659					18	12	2	0	0	0	0.20789	1	10316	10316		29.15	4.9468	1	294980	+		29047	30058	19441	19451	33113	33113					0.1472895393055751
LKKHKILIK	9	Unmodified	_LKKHKILIK_					0	0	0			REV__nc|ENSG00000124181|P19174|PLCG1	REV__nc|ENSG00000124181|P19174|PLCG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.4041137695312	2	560.900069	1119.78558	2.5198	0.0014134	3.4522	0.0019363	5.972	0.0033497	560.9020052437279	107.78	0.22402	107.89	107.71	107.93	0.10396					9	7	2	0	0	0	0.20789	1	13150	13150		1.0954	0	1	1251600	+		29048	18565	19442	19452	33114	33114					0.23048317221105208
LKKHKPDF	8	Unmodified	_LKKHKPDF_					0	0	0		ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.80169677734375	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.553	1	48.553	48.053	49.053	0								0	0	0	0.29978	1	3775	3775		21.96	0	1				29049	5329	19443	19453	33115	33115					0.08122056922411502
LKKIAKVMKES	11	Unmodified	_LKKIAKVMKES_					0	0	0			REV__ENSG00000066279|ENST00000367409|ASPM	REV__ENSG00000066279|ENST00000367409|ASPM	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	637.8978881835938	2	637.896866	1273.77918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.135	1	80.189	79.689	80.689	0.053841								0	0	0	0.56276	1	7935	7935		24.519	0.31644	1		+		29050	16520	19444	19454	33116	33116					0.15324011207417243
LKKIETRKSL	10	Unmodified	_LKKIETRKSL_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|44|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|44|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|44|1|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.74896240234375	3	405.930962	1214.77106	1.0971	0.00044537	3.7124	0.001507	4.8096	0.0019524	405.93235235125513	36.923	1.3895	36.934	36.075	37.464	0.011173					83	30	4	0	0	0	0.37624	1	2380	2380		24.232	4.235	1	234130			29051	14654	19445	19455	33117	33117					0.17226200282311765
LKKIKLELKI	10	Unmodified	_LKKIKLELKI_					0	0	0			REV__L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|156|3|sense	REV__L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|156|3|sense	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	409.29217529296875	3	409.29172	1224.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.973	1	72.01	71.51	72.51	0.037148								0	0	0	0.45132	1	6836	6836		10.587	0.94066	1		+		29052	29579	19446	19456	33118	33118					0.2498972236123791
LKKIKLELKI	10	Unmodified	_LKKIKLELKI_					0	0	0			REV__L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|156|3|sense	REV__L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|156|3|sense	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	409.29241943359375	3	409.29172	1224.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.136	1	19.206	18.706	19.706	0.070713								0	0	0	0.45132	1	401	401		3.8434	0	1		+		29053	29579	19446	19456	33119	33119					0.2498972236123791
LKKILVCDS	9	Unmodified	_LKKILVCDS_					0	0	0		ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	ENSG00000118412|ENST00000551025|CASP8AP2	ENSG00000118412|ENST00000551025|CASP8AP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8036804199219	2	509.801903	1017.58925	1.253	0.0006388	2.312	0.0011787	3.5651	0.0018175	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.78536	1	8938	8938		29.15	0.89528	1	3243500			29054	3028	19447	19457	33120	33120					0.08116144265056846
LKKILVCDS	9	Unmodified	_LKKILVCDS_					0	0	0		ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	ENSG00000118412|ENST00000551025|CASP8AP2	ENSG00000118412|ENST00000551025|CASP8AP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8037109375	2	509.801903	1017.58925	0.22319	0.00011378	3.3375	0.0017014	3.5607	0.0018152	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.78536	1	8939	8939		29.15	0.89528	1	3453000			29055	3028	19447	19457	33121	33121					0.08116144265056846
LKKKEREREK	10	Unmodified	_LKKKEREREK_					0	0	0		chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.3074035644531	3	448.60877	1342.80448	0.27028	0.00012125	0.97435	0.0004371	1.2446	0.00055835	448.60908616790505	80.602	1.0637	80.542	80.114	81.178	-0.059692					68	29	3	0	0	0	0.37624	1	8182	8182		19.263	7.3303	1	176420			29056	304	19448	19458	33122	33122					0.14679202054207963
LKKKEREREK	10	Unmodified	_LKKKEREREK_					0	0	0		chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	448.60877	1342.80448	-1.2877	-0.00057768	2.5718	0.0011538	1.2841	0.00057607	448.6097134919099	80.822	1.002	80.822	80.304	81.306	0	0.36177	0.0011015	NaN	14.086	75	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116830			29057	304	19448	19458							0.14679202054207963
LKKKEREREK	10	Unmodified	_LKKKEREREK_					0	0	0		chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	448.60877	1342.80448	-0.14474	-6.4931E-05	1.2374	0.00055511	1.0927	0.00049018	448.9436578757924	80.471	1.7962	80.533	79.3	81.096	0.062225	0.072325	-0.00069446	NaN	14.086	80	55	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197360			29058	304	19448	19458							0.14679202054207963
LKKKEREREK	10	Unmodified	_LKKKEREREK_					0	0	0		chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	448.60877	1342.80448	0.83827	0.00037606	0.45007	0.0002019	1.2883	0.00057796	448.60871965023273	80.416	1.037	80.472	79.958	80.995	0.055916	0.011379	-0.0017541	NaN	14.086	64	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	154880			29059	304	19448	19458							0.14679202054207963
LKKKEREREK	10	Unmodified	_LKKKEREREK_					0	0	0		chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	448.60877	1342.80448	-1.3042	-0.00058507	2.3076	0.0010352	1.0034	0.00045013	448.944134575262	80.178	1.0585	80.315	79.778	80.837	0.13701	-0.14513	0.00074581	NaN	14.086	64	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	227100			29060	304	19448	19458							0.14679202054207963
LKKKEREREK	10	Unmodified	_LKKKEREREK_					0	0	0		chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	chr2:112175839-112178056|38|13.42|0.28|5.58|+|1|TE_info:AluSz,AluSz_dup12576,Alu,SINE,acceptor,+,112178056,112178194|FBLN7,None|2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	448.60877	1342.80448	-1.5058	-0.00067553	2.9369	0.0013175	1.4311	0.00064199	448.60991279607794	80.141	1.0395	80.246	79.789	80.828	0.10527	-0.21418	0.0015928	NaN	14.086	80	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197830			29061	304	19448	19458							0.14679202054207963
LKKKEYMN	8	Unmodified	_LKKKEYMN_					0	0	0			REV__ENST00000261015.4_1_2:203776785-203776842:-|nuORF	REV__ENST00000261015.4_1_2:203776785-203776842:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.2903442382812	2	527.291702	1052.56885	0.03769	1.9874E-05	-3.4356	-0.0018116	-3.3979	-0.0017917	527.289714141244	52.998	0.5777	53.612	53.324	53.902	0.61436					31	13	3	0	0	0	0.73851	1	5359	5359		65.803	3.6958	1	1020800	+		29062	24376	19449	19459	33123	33123					0.044669736052583175
LKKKEYVMGL	10	Unmodified	_LKKKEYVMGL_					0	0	0		ENSG00000137504|ENST00000527447|CREBZF	ENSG00000137504|ENST00000527447|CREBZF	ENSG00000137504|ENST00000527447|CREBZF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5747985839844	3	403.573898	1207.69987	-1.7546	-0.00070812	3.9701	0.0016022	2.2154	0.00089409	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.85633	1	8077	8077		21.686	6.9921	1	1090300			29063	4208	19450	19460	33124	33124					0.10432364253279047
LKKKFIKRR	9	Unmodified	_LKKKFIKRR_					0	0	0		ENSG00000011114|ENST00000334746|BTBD7;nc|ENSG00000011114|Q9P203-3|BTBD7	ENSG00000011114|ENST00000334746|BTBD7	ENSG00000011114|ENST00000334746|BTBD7	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	608.718505859375	2	608.921867	1215.82918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.427	1	55.49	54.99	55.99	0.063725								0	0	0	0.36148	1	4639	4639		11.511	4.3177	1				29064	780	19451	19461	33125	33125					0.22989926718264542
LKKKFIKRRKS	11	Unmodified	_LKKKFIKRRKS_					0	0	0		ENSG00000011114|ENST00000334746|BTBD7;nc|ENSG00000011114|Q9P203-3|BTBD7	ENSG00000011114|ENST00000334746|BTBD7	ENSG00000011114|ENST00000334746|BTBD7	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.9920959472656	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.937	1	74.064	73.564	74.564	0.12711								0	0	0	0.56276	1	6812	6812		8.0344	5.3463	1				29065	780	19452	19462	33126	33126					0.2579322787257752
LKKKFIKRRKS	11	Unmodified	_LKKKFIKRRKS_					0	0	0		ENSG00000011114|ENST00000334746|BTBD7;nc|ENSG00000011114|Q9P203-3|BTBD7	ENSG00000011114|ENST00000334746|BTBD7	ENSG00000011114|ENST00000334746|BTBD7	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.9913330078125	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.992	1	75.08	74.58	75.58	0.087631								0	0	0	0.56276	1	6927	6927		2.8518	1.6199	1				29066	780	19452	19462	33127	33127					0.2579322787257752
LKKKKASFCK	10	Unmodified	_LKKKKASFCK_					0	0	0		ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.86669921875	2	590.865369	1179.71618	-0.23931	-0.0001414	2.2964	0.0013569	2.0571	0.0012155	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.67571	3	10710	10675;10710;10787		45.972	1.5951	1	39787000			29067	13778	19453	19463	33128;33129;33130	33129					0.1335149021003872
LKKKKASFCK	10	Unmodified	_LKKKKASFCK_					0	0	0		ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.867431640625	2	590.865369	1179.71618	-0.64255	-0.00037966	2.2321	0.0013189	1.5895	0.0009392	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.77314	1	11310	11310		40.778	3.6191	1	52912000			29068	13778	19453	19463	33131	33131					0.1335149021003872
LKKKKASFCK	10	Unmodified	_LKKKKASFCK_					0	0	0		ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8666381835938	2	590.865369	1179.71618	-0.76514	-0.00045209	2.4505	0.0014479	1.6854	0.00099584	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.4892	3	11310	11168;11310;11359		56.721	14.325	1	54208000			29069	13778	19453	19463	33132;33133;33134	33133					0.1335149021003872
LKKKKASFCK	10	Unmodified	_LKKKKASFCK_					0	0	0		ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8670043945312	2	590.865369	1179.71618	0.84845	0.00050132	0.81922	0.00048405	1.6677	0.00098537	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.86218	1	11047	11047		32.812	0	1	94771000			29070	13778	19453	19463	33135	33135					0.1335149021003872
LKKKKASFCK	10	Unmodified	_LKKKKASFCK_					0	0	0		ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8668823242188	2	590.865369	1179.71618	0.89156	0.00052679	0.84938	0.00050187	1.7409	0.0010287	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.54701	5	11173	11015;11040;11089;11113;11173		52.937	15.778	1	84183000			29071	13778	19453	19463	33136;33137;33138;33139;33140	33140					0.1335149021003872
LKKKKASFCK	10	Unmodified	_LKKKKASFCK_					0	0	0		ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.866943359375	2	590.865369	1179.71618	-1.319	-0.00077937	3.0876	0.0018243	1.7685	0.001045	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.86471	1	11123	11123		30.318	1.1477	1	81379000			29072	13778	19453	19463	33141	33141					0.1335149021003872
LKKKKASFCK	10	Unmodified	_LKKKKASFCK_					0	0	0		ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	ENST00000557583.1_1_14:58690362-58697140:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8668212890625	2	590.865369	1179.71618	3.2055	0.001894	-0.82854	-0.00048955	2.377	0.0014045	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.80179	3	12593	12593;12684;12708		39.253	3.6345	1	6398400			29073	13778	19453	19463	33142;33143;33144	33142					0.1335149021003872
LKKKKLFK	8	Unmodified	_LKKKKLFK_					0	0	0		ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3137817382812	2	516.868237	1031.72192	0.80289	0.00041499	-2.8839	-0.0014906	-2.081	-0.0010756	516.8675698733097	98.937	0.36669	99.093	98.948	99.314	0.15659					11	8	2	0	0	0	0.4196	1	10267	10267		4.3163	0	1	64167			29074	9022	19454	19464	33145	33145					0.20732956784036105
LKKKKRLSQS	10	Unmodified	_LKKKKRLSQS_					0	0	0		nc|ENSG00000162923|Q9H7D7-2|WDR26;nc|ENSG00000162923|Q9H7D7|WDR26;ENSG00000162923|ENST00000414423|WDR26;ENST00000477425.1_1_1:224619270-224621495:-|nuORF;ENST00000479778.1_1_1:224619136-224621495:-|nuORF;ENST00000489825.5_1_1:224612352-224621495:-|nuORF;nc|ENSG00000162923|Q9H7D7-3|WDR26;nc|ENSG00000162923|Q9H7D7-4|WDR26;ENST00000443112.6_1_1:224601027-224621705:-|nuORF	nc|ENSG00000162923|Q9H7D7-2|WDR26	nc|ENSG00000162923|Q9H7D7-2|WDR26	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2560729980469	3	405.934706	1214.78229	-1.0712	-0.00043484	0.194	7.8749E-05	-0.87721	-0.00035609	406.2691240568306	63.937	0.20401	63.967	63.771	63.975	0.030243					11	7	2	0	0	0	0.37624	1	5611	5611		10.587	0	1	46751			29075	5749	19455	19465	33146	33146					0.18349022376446555
LKKKLKSSTLH	11	Unmodified	_LKKKLKSSTLH_					0	0	0		ENST00000569028.2_1_16:34712445-34712784:-|nuORF	ENST00000569028.2_1_16:34712445-34712784:-|nuORF	ENST00000569028.2_1_16:34712445-34712784:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3037109375	3	428.278362	1281.81326	-0.937	-0.0004013	0.26543	0.00011368	-0.67157	-0.00028762	428.2783978201493	57.876	2.1686	58.271	57.929	60.098	0.39407					99	52	3	0	0	0	0.1767	1	6251	6251		9.2118	0	1	1570100			29076	13975	19456	19466	33147	33147					0.18362175690708682
LKKKLKSSTLH	11	Unmodified	_LKKKLKSSTLH_					0	0	0		ENST00000569028.2_1_16:34712445-34712784:-|nuORF	ENST00000569028.2_1_16:34712445-34712784:-|nuORF	ENST00000569028.2_1_16:34712445-34712784:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	428.278362	1281.81326	0.5605	0.00024005	-1.1511	-0.000493	-0.59062	-0.00025295	428.2777267845834	57.749	1.6899	58.303	57.847	59.537	0.55442	0.016255	-0.00097177	NaN	9.2118	93	41	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1763300			29077	13975	19456	19466							0.18362175690708682
LKKKNKKTL	9	Unmodified	_LKKKNKKTL_					0	0	0		ENSG00000176208|ENST00000321990|ATAD5;ENST00000585133.1_1_17:29162236-29196669:+|nuORF;nc|ENSG00000176208|Q96QE3-2|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.8795166015625	2	550.879333	1099.74411	1.2771	0.00070354	-1.3833	-0.00076203	-0.10617	-5.8487E-05	550.8784430359498	108.9	0.52892	108.94	108.73	109.25	0.034355					60	25	3	0	0	0	0.7932	2	11988	11988;11993		16.473	4.2663	1	2842700			29078	7064	19457	19467	33148;33149	33148					0.19823136461786817
LKKKNKKTL	9	Unmodified	_LKKKNKKTL_					0	0	0		ENSG00000176208|ENST00000321990|ATAD5;ENST00000585133.1_1_17:29162236-29196669:+|nuORF;nc|ENSG00000176208|Q96QE3-2|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.0004272460938	2	550.879333	1099.74411	-1.4494	-0.00079842	1.3774	0.00075876	-0.07199	-3.9658E-05	550.8799325240531	108.99	0.41042	109.01	108.81	109.22	0.020569					39	20	2	0	0	0	0.20789	1	11655	11655		3.1592	0	1	1008100			29079	7064	19457	19467	33150	33150					0.19823136461786817
LKKKNKKTL	9	Unmodified	_LKKKNKKTL_					0	0	0		ENSG00000176208|ENST00000321990|ATAD5;ENST00000585133.1_1_17:29162236-29196669:+|nuORF;nc|ENSG00000176208|Q96QE3-2|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	550.879333	1099.74411	0.85229	0.00046951	-1.1181	-0.00061591	-0.26576	-0.0001464	550.8786946436571	108.91	0.45837	108.99	108.78	109.24	0.078552	0.0051892	0.0013109	NaN	3.1592	37	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1127800			29080	7064	19457	19467							0.19823136461786817
LKKKPRRSCT	10	Unmodified	_LKKKPRRSCT_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1;ENST00000584897.5_1_18:2726458-2784452:+|nuORF;nc|ENSG00000101596|A6NHR9-3|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2493591308594	3	406.248408	1215.72339	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.6	1	114.57	114.07	115.07	-0.024452								0	0	0	0.45132	1	12700	12700		26.063	7.5323	1				29081	1951	19458	19468	33151	33151					0.1241622281047512
LKKKQRSF	8	Unmodified	_LKKKQRSF_					0	0	0		ENST00000437151.1_1_6:87680204-87680483:+|nuORF	ENST00000437151.1_1_6:87680204-87680483:+|nuORF	ENST00000437151.1_1_6:87680204-87680483:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.81103515625	2	517.827101	1033.63965	2.012	0.0010419	-0.76939	-0.00039841	1.2427	0.00064348	517.8260571644122	100.38	0.24461	100.71	100.56	100.8	0.33294					9	5	2	0	0	0	0.4196	1	12142	12142		11.511	0	1	62319			29082	11733	19459	19469	33152	33152					0.12417434705071173
LKKKWGPKP	9	Unmodified	_LKKKWGPKP_					0	0	0			REV__ENST00000569426.1_1_16:89790014-89799821:+|nuORF	REV__ENST00000569426.1_1_16:89790014-89799821:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.3477172851562	2	541.347669	1080.68079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.684	1	42.637	42.137	43.137	-0.047176								0	0	0	0.30416	1	2885	2885		29.15	3.6994	1		+		29083	20622	19460	19470	33153	33153					0.1436719574453491
LKKLARTHTRS	11	Unmodified	_LKKLARTHTRS_					0	0	0			REV__ENSG00000176953|ENST00000320805|NFATC2IP	REV__ENSG00000176953|ENST00000320805|NFATC2IP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.9388122558594	3	437.60536	1309.79425	0.93747	0.00041024	-2.7986	-0.0012247	-1.8612	-0.00081446	437.60413783215915	15.683	0.47148	15.761	15.549	16.02	0.077959					33	20	2	0	0	0	0.71803	1	49	49		28.577	9.3141	1	53717	+		29084	22164	19461	19471	33154	33154					0.15174639119618405
LKKLARTHTRS	11	Unmodified	_LKKLARTHTRS_					0	0	0			REV__ENSG00000176953|ENST00000320805|NFATC2IP	REV__ENSG00000176953|ENST00000320805|NFATC2IP	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	437.60536	1309.79425	-0.39751	-0.00017395	-1.4922	-0.00065297	-1.8897	-0.00082692	437.60462813644443	16.143	0.34375	16.063	15.955	16.299	-0.080017	0.097441	0.0012578	NaN	28.577	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98668	+		29085	22164	19461	19471							0.15174639119618405
LKKLARTHTRS	11	Unmodified	_LKKLARTHTRS_					0	0	0			REV__ENSG00000176953|ENST00000320805|NFATC2IP	REV__ENSG00000176953|ENST00000320805|NFATC2IP	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	437.60536	1309.79425	-1.6248	-0.00071102	-0.4513	-0.00019749	-2.0761	-0.00090851	437.60506833777157	15.914	0.28422	15.962	15.857	16.141	0.047804	-0.0035397	0.0026242	NaN	28.577	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96678	+		29086	22164	19461	19471							0.15174639119618405
LKKLDLVAIPD	11	Unmodified	_LKKLDLVAIPD_					0	0	0		nc|ENSG00000113441|Q9UIQ6-3|LNPEP;nc|ENSG00000113441|Q9UIQ6-2|LNPEP;ENSG00000113441|ENST00000231368|LNPEP	nc|ENSG00000113441|Q9UIQ6-3|LNPEP	nc|ENSG00000113441|Q9UIQ6-3|LNPEP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.8792724609375	2	612.881739	1223.74892	-1.2473	-0.00076447	-2.388	-0.0014636	-3.6353	-0.002228	612.8800479877376	104.48	2.784	104.57	103.95	106.73	0.093857					273	68	6	0	0	0	0.62914	1	11037	11037		24.519	0	1	81450000			29087	2724	19462	19472	33155	33155					0.14599975813894162
LKKLIWVAIP	10	Unmodified	_LKKLIWVAIP_					0	0	0			REV__ENSG00000106771|ENST00000374586|TMEM245	REV__ENSG00000106771|ENST00000374586|TMEM245	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8662109375	2	590.894452	1179.77435	0.84628	0.00050006	4.2485	0.0025104	5.0948	0.0030105	590.8964532441718	103.16	0.34353	103.35	103.2	103.54	0.18298					11	8	2	0	0	0	0.37624	1	10902	10902		21.96	0	1	301800	+		29088	17627	19463	19473	33156	33156					0.19165495126958376
LKKLKAEYRKK	11	Unmodified	_LKKLKAEYRKK_					0	0	0			REV__ENSG00000127989|ENST00000351870|MTERF1	REV__ENSG00000127989|ENST00000351870|MTERF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.9702453613281	3	468.973161	1403.89765	-0.32674	-0.00015323	-4.1476	-0.0019451	-4.4744	-0.0020984	468.97108105597175	48.857	1.6348	48.764	48.126	49.761	-0.093178					121	39	4	0	0	0	0.79716	1	3740	3740		11.932	3.1331	1	745890	+		29089	18756	19464	19474	33157	33157					0.21186126507427616
LKKLKLVLP	9	Unmodified	_LKKLKLVLP_					0	0	0			REV__nc|ENSG00000157601|P20591-2|MX1	REV__nc|ENSG00000157601|P20591-2|MX1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3610229492188	2	526.38372	1050.75289	-0.025049	-1.3185E-05	-3.3612	-0.0017693	-3.3863	-0.0017825	526.382101327331	35.371	0.43643	35.358	35.035	35.472	-0.012203					11	9	2	0	0	0	0.20789	1	2160	2160		12.207	3.9756	1	54191	+		29090	20554	19465	19475	33158	33158					0.22954110098248748
LKKLLLVHG	9	Unmodified	_LKKLLLVHG_					0	0	0		ENSG00000118322|ENST00000327245|ATP10B	ENSG00000118322|ENST00000327245|ATP10B	ENSG00000118322|ENST00000327245|ATP10B	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.84820556640625	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.97	1	114.04	113.54	114.54	0.063232								0	0	0	0.36191	1	12203	12203		7.1934	2.8771	1				29091	3023	19466	19476	33159	33159					0.17648079887305812
LKKLLSTQVPA	11	Unmodified	_LKKLLSTQVPA_					0	0	0		ENSG00000184867|ENST00000356824|ARMCX2	ENSG00000184867|ENST00000356824|ARMCX2	ENSG00000184867|ENST00000356824|ARMCX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3806762695312	2	599.381906	1196.74926	0.89992	0.0005394	-3.8863	-0.0023293	-2.9863	-0.00179	599.379410135585	103.38	3.1227	103.51	103.01	106.14	0.12621					246	78	5	0	0	0	0.64498	1	10956	10956		39.253	4.1008	1	20012000			29092	7648	19467	19477	33160	33160					0.15875395533748815
LKKLQAWTPPE	11	Unmodified	_LKKLQAWTPPE_					0	0	0			REV__nc|ENSG833|P61570|ERVK-25_env	REV__nc|ENSG833|P61570|ERVK-25_env	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26788330078125	3	437.587084	1309.73942	1.1539	0.00050495	3.1564	0.0013812	4.3104	0.0018862	437.58880933458937	52.021	0.1214	52.034	51.965	52.086	0.012436					4	2	2	0	0	0	0.17437	1	4508	4508		15.337	0	1	24506	+		29093	30313	19468	19478	33161	33161					0.09694207528355037
LKKLRAAQER	10	Unmodified	_LKKLRAAQER_					0	0	0			REV__ENST00000573805.1_1_17:4863752-4871075:-|nuORF	REV__ENST00000573805.1_1_17:4863752-4871075:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.9230041503906	3	404.922689	1211.74624	-0.36148	-0.00014637	0.96527	0.00039086	0.60379	0.00024449	404.9229767423174	26.33	2.0851	26.291	25.89	27.975	-0.038523					105	48	5	0	0	0	0.86207	1	1196	1196		24.232	4.2013	1	394560	+		29094	17021	19469	19479	33162	33162					0.1488356519955687
LKKLVPRH	8	Unmodified	_LKKLVPRH_					0	0	0		nc|ENSG00000003400|Q92851-6|CASP10;nc|ENSG00000003400|Q92851-2|CASP10;ENSG00000003400|ENST00000286186|CASP10	nc|ENSG00000003400|Q92851-6|CASP10	nc|ENSG00000003400|Q92851-6|CASP10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.1329345703125	2	495.832186	989.649819	1.0576	0.00052442	4.2246	0.0020947	5.2822	0.0026191	495.83418283446184	36.515	1.0806	36.955	36.745	37.825	0.44043					52	25	3	0	0	0	0.4196	1	2859	2859		8.2313	4.547	1	192810			29095	657	19470	19480	33163	33163					0.15458042430304886
LKKMFVKAFV	10	Unmodified	_LKKMFVKAFV_					0	0	0			REV__ENST00000481528.1_1_1:52926763-52927313:-|nuORF	REV__ENST00000481528.1_1_1:52926763-52927313:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.8721923828125	2	605.872662	1209.73077	-0.046166	-2.7971E-05	-0.99313	-0.00060171	-1.0393	-0.00062968	605.8718844200029	100.18	2.006	100.22	99.762	101.77	0.046349					129	46	5	0	0	0	0.86452	1	10724	10724		30.504	3.8107	1	1666000	+		29096	27445	19471	19481	33164	33164					0.13429562358192015
LKKMFVKAFV	10	Unmodified	_LKKMFVKAFV_					0	0	0			REV__ENST00000481528.1_1_1:52926763-52927313:-|nuORF	REV__ENST00000481528.1_1_1:52926763-52927313:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.8717651367188	2	605.872662	1209.73077	1.0692	0.00064779	-1.9751	-0.0011967	-0.90592	-0.00054887	605.8712819289403	100.09	1.5113	100.3	99.817	101.33	0.21512					93	35	4	0	0	0	0.85694	1	10480	10480		21.96	1.9631	1	798340	+		29097	27445	19471	19481	33165	33165					0.13429562358192015
LKKMKKTT	8	Unmodified	_LKKMKKTT_					0	0	0			REV__ENSG00000164440|ENST00000358430|TXLNB	REV__ENSG00000164440|ENST00000358430|TXLNB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.31378173828125	2	489.312438	976.610322	2.0542	0.0010051	1.2422	0.00060782	3.2964	0.0016129	489.3129287195053	95.274	2.0769	95.216	94.723	96.8	-0.057533					125	48	4	0	0	0	0.79929	1	10202	10202		18.324	3.6603	1	1409600	+		29098	21082	19472	19482	33166	33166					0.1210815436458006
LKKMKKTT	8	Unmodified	_LKKMKKTT_					0	0	0			REV__ENSG00000164440|ENST00000358430|TXLNB	REV__ENSG00000164440|ENST00000358430|TXLNB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.31365966796875	2	489.312438	976.610322	-0.66551	-0.00032564	3.9385	0.0019272	3.273	0.0016015	489.3142377106515	95.017	1.7009	95.248	94.736	96.437	0.23103					105	40	4	0	0	0	0.81548	1	9727	9727		20.482	0	1	1344100	+		29099	21082	19472	19482	33167	33167					0.1210815436458006
LKKMRPMK	8	Unmodified	_LKKMRPMK_					0	0	0			REV__nc|ENSG00000162723|Q96A28-2|SLAMF9	REV__nc|ENSG00000162723|Q96A28-2|SLAMF9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3113403320312	2	516.314457	1030.61436	0.96653	0.00049903	-2.012	-0.0010388	-1.0455	-0.0005398	516.3133887311924	32.644	2.0073	32.856	32.593	34.6	0.21168					79	47	2	0	0	0	0.85277	1	2333	2333		25.45	2.4077	1	535970	+		29100	20839	19473	19483	33168	33168					0.10027920586639993
LKKNYVSKH	9	Unmodified	_LKKNYVSKH_					0	0	0		nc|ENSG00000139155|Q9NYB5-2|SLCO1C1;ENSG00000139155|ENST00000266509|SLCO1C1	nc|ENSG00000139155|Q9NYB5-2|SLCO1C1	nc|ENSG00000139155|Q9NYB5-2|SLCO1C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8273315429688	2	558.82984	1115.64513	-0.1486	-8.3042E-05	-3.8649	-0.0021598	-4.0135	-0.0022429	558.8274959479605	65.531	0.78168	65.558	65.246	66.027	0.027321					103	42	3	0	0	0	0.71772	1	6211	6211		39.253	6.4404	1	6703400			29101	4350	19474	19484	33169	33169					0.09193113496894512
LKKPAPKSY	9	Unmodified	_LKKPAPKSY_					0	0	0		nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-4|SVIL;nc|ENSG00000197321|O95425-3|SVIL;ENSG00000197321|ENST00000355867|SVIL	nc|ENSG00000197321|O95425-2|SVIL	nc|ENSG00000197321|O95425-2|SVIL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.31298828125	2	516.316035	1030.61752	-0.2553	-0.00013181	-3.2452	-0.0016755	-3.5005	-0.0018073	516.3144185010789	103.22	1.1465	103.4	103.01	104.15	0.18298					74	28	3	0	0	0	0.7932	1	10906	10906		21.96	2.8564	1	978380			29102	8152	19475	19485	33170	33170					0.10343210236646883
LKKPFARPFI	10	Unmodified	_LKKPFARPFI_					0	0	0			REV__ENSG00000138031|ENST00000679454|ADCY3	REV__ENSG00000138031|ENST00000679454|ADCY3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2575378417969	3	406.257009	1215.7492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.289	1	57.395	56.895	57.895	0.1055								0	0	0	0.45132	1	4853	4853		11.097	0	1		+		29103	19430	19476	19486	33171	33171					0.14995440324400988
LKKPPMKSLR	10	Unmodified	_LKKPPMKSLR_					0	0	0		ENSG00000175097|ENST00000311485|RAG2	ENSG00000175097|ENST00000311485|RAG2	ENSG00000175097|ENST00000311485|RAG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.3800659179688	2	599.378643	1196.74273	-0.35766	-0.00021438	2.772	0.0016615	2.4143	0.0014471	599.3801693786043	103.37	3.7428	103.41	103.03	106.77	0.041481					250	89	5	0	0	0	0.86218	1	11245	11245		32.812	7.2384	1	13277000			29104	6990	19477	19487	33172	33172					0.15223179101371898
LKKPRRII	8	Unmodified	_LKKPRRII_					0	0	0		nc|ENSG00000142657|P52209-2|PGD;ENSG00000142657|ENST00000270776|PGD	nc|ENSG00000142657|P52209-2|PGD	nc|ENSG00000142657|P52209-2|PGD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.8618774414062	2	512.361111	1022.70767	-0.36988	-0.00018951	0.50559	0.00025904	0.13571	6.9531E-05	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.82419	1	7267	7267		13.775	0	1	304520			29105	4578	19478	19488	33173	33173					0.1972230435574147
LKKQILKLMT	10	Unmodified	_LKKQILKLMT_					0	0	0			REV__ENSG00000160445|ENST00000291900|ZER1	REV__ENSG00000160445|ENST00000291900|ZER1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2960510253906	3	405.933427	1214.77845	-1.909	-0.00077492	0.67341	0.00027336	-1.2356	-0.00050156	405.9336188008111	36.88	1.2542	36.904	36.228	37.482	0.023621					64	33	3	0	0	0	0.37624	1	2137	2137		10.587	0	1	147220	+		29106	20720	19479	19489	33174	33174					0.17965216558377506
LKKQKEKVDT	10	Unmodified	_LKKQKEKVDT_					0	0	0			REV__ENSG00000008869|ENST00000233099|HEATR5B	REV__ENSG00000008869|ENST00000233099|HEATR5B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24884033203125	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.18	1	115.15	114.65	115.65	-0.02433								0	0	0	0.45132	1	12759	12759		30.569	5.4429	1		+		29107	16144	19480	19490	33175	33175					0.1194561714869451
LKKQKEKVDT	10	Unmodified	_LKKQKEKVDT_					0	0	0			REV__ENSG00000008869|ENST00000233099|HEATR5B	REV__ENSG00000008869|ENST00000233099|HEATR5B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.249267578125	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.08	1	117.05	116.55	117.55	-0.02433								0	0	0	0.45132	1	12967	12967		20.03	0.7678	1		+		29108	16144	19480	19490	33176	33176					0.1194561714869451
LKKQKEKVDT	10	Unmodified	_LKKQKEKVDT_					0	0	0			REV__ENSG00000008869|ENST00000233099|HEATR5B	REV__ENSG00000008869|ENST00000233099|HEATR5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2487487792969	3	406.246839	1215.71869	3.1409	0.001276	2.7496	0.001117	5.8905	0.002393	406.24731251758544	112.95	0.35545	112.98	112.85	113.21	0.030602					32	16	3	0	0	0	0.85441	1	13652	13652		20.837	0.80668	1	70867	+		29109	16144	19480	19490	33177	33177					0.1194561714869451
LKKQVQSYI	9	Unmodified	_LKKQVQSYI_					0	0	0		ENST00000489245.5_1_3:183211997-183273441:-|nuORF;ENSG00000172578|ENST00000341319|KLHL6	ENST00000489245.5_1_3:183211997-183273441:-|nuORF	ENST00000489245.5_1_3:183211997-183273441:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.830322265625	2	553.832049	1105.64954	0.37109	0.00020552	-3.8764	-0.0021469	-3.5053	-0.0019414	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.7932	1	10349	10349		24.203	0	1	1786500			29110	6779	19481	19491	33178	33178					0.10094577919812764
LKKRDGGSCD	10	Unmodified	_LKKRDGGSCD_					0	0	0			REV__nc|ENSG00000109111|Q7KZ85-2|SUPT6H	REV__nc|ENSG00000109111|Q7KZ85-2|SUPT6H	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8063354492188	2	539.769123	1077.52369	-0.57814	-0.00031206	0.90932	0.00049082	0.33118	0.00017876	539.7691821212802	52.09	0.91242	52.514	51.894	52.807	0.42348					27	21	2	0	0	0	0.37624	1	5234	5234		25.574	12.762	1	328320	+		29111	17747	19482	19492	33179	33179					-0.011968769279292246
LKKRDGGSCD	10	Unmodified	_LKKRDGGSCD_					0	0	0			REV__nc|ENSG00000109111|Q7KZ85-2|SUPT6H	REV__nc|ENSG00000109111|Q7KZ85-2|SUPT6H	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	539.769123	1077.52369	-0.0052611	-2.8398E-06	0.79342	0.00042826	0.78816	0.00042542	539.7693371201107	51.812	0.48462	52.479	52.23	52.715	0.66729	-0.017264	-6.4036E-05	NaN	25.574	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338580	+		29112	17747	19482	19492							-0.011968769279292246
LKKRDTKSIY	10	Unmodified	_LKKRDTKSIY_					0	0	0			REV__ENSG00000185610|ENST00000332700|DBX2	REV__ENSG00000185610|ENST00000332700|DBX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.24957275390625	3	417.918834	1250.73467	1.9854	0.00082972	2.3576	0.00098527	4.3429	0.001815	417.91973324598933	45.042	2.3897	45.038	44.498	46.888	-0.0041618					145	56	4	0	0	0	0.86471	1	3651	3651		28.577	8.2617	1	825880	+		29113	22778	19483	19493	33180	33180					0.11933323385619587
LKKRDTKSIY	10	Unmodified	_LKKRDTKSIY_					0	0	0			REV__ENSG00000185610|ENST00000332700|DBX2	REV__ENSG00000185610|ENST00000332700|DBX2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	417.918834	1250.73467	-1.8074	-0.00075537	6.0119	0.0025125	4.2045	0.0017571	417.9212791892677	44.94	1.9784	44.94	44.329	46.307	0	-0.080594	0.0015891	NaN	28.577	144	49	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	561800	+		29114	22778	19483	19493							0.11933323385619587
LKKRDTKSIY	10	Unmodified	_LKKRDTKSIY_					0	0	0			REV__ENSG00000185610|ENST00000332700|DBX2	REV__ENSG00000185610|ENST00000332700|DBX2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	417.918834	1250.73467	0.11699	4.8892E-05	4.2439	0.0017736	4.3609	0.0018225	417.92055033219907	45.225	1.7377	45.207	44.573	46.311	-0.018585	0.18633	-0.0006276	NaN	28.577	116	40	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	612700	+		29115	22778	19483	19493							0.11933323385619587
LKKRDTKSIY	10	Unmodified	_LKKRDTKSIY_					0	0	0			REV__ENSG00000185610|ENST00000332700|DBX2	REV__ENSG00000185610|ENST00000332700|DBX2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	417.918834	1250.73467	-0.9999	-0.00041787	5.1675	0.0021596	4.1677	0.0017417	417.920925906652	45.103	1.941	45.072	44.489	46.43	-0.031067	0.051386	0.00053044	NaN	28.577	124	44	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	932620	+		29116	22778	19483	19493							0.11933323385619587
LKKRDTKSIY	10	Unmodified	_LKKRDTKSIY_					0	0	0			REV__ENSG00000185610|ENST00000332700|DBX2	REV__ENSG00000185610|ENST00000332700|DBX2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	417.918834	1250.73467	-1.8739	-0.00078314	6.1846	0.0025847	4.3107	0.0018015	417.92137413703983	44.981	2.1124	44.993	44.382	46.494	0.012058	-0.027302	0.0018056	NaN	28.577	144	54	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	796890	+		29117	22778	19483	19493							0.11933323385619587
LKKRDTKSIY	10	Unmodified	_LKKRDTKSIY_					0	0	0			REV__ENSG00000185610|ENST00000332700|DBX2	REV__ENSG00000185610|ENST00000332700|DBX2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	417.918834	1250.73467	0.23294	9.7352E-05	4.1096	0.0017175	4.3426	0.0018148	417.920453070058	44.946	2.3184	44.995	44.379	46.697	0.048996	-0.025282	-0.00079595	NaN	28.577	150	60	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	880780	+		29118	22778	19483	19493							0.11933323385619587
LKKRDTKSIY	10	Unmodified	_LKKRDTKSIY_					0	0	0			REV__ENSG00000185610|ENST00000332700|DBX2	REV__ENSG00000185610|ENST00000332700|DBX2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	417.918834	1250.73467	-0.37265	-0.00015574	4.7129	0.0019696	4.3403	0.0018139	417.9207300180324	44.967	2.3056	44.899	44.309	46.614	-0.06863	-0.12173	-3.9563E-05	NaN	28.577	152	59	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	712160	+		29119	22778	19483	19493							0.11933323385619587
LKKRGLGG	8	Unmodified	_LKKRGLGG_					0	0	0			REV__ENST00000512375.1_1_4:84377137-84378237:+|nuORF	REV__ENST00000512375.1_1_4:84377137-84378237:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	414.76165771484375	2	414.774337	827.534121	-0.187	-7.7563E-05	2.1055	0.00087332	1.9185	0.00079576	414.7750492147315	88.531	0.77293	88.599	88.31	89.083	0.068161					25	18	2	0	0	0	0.4196	1	9039	9039		35.201	20.537	1	80050	+		29120	20897	19484	19494	33181	33181					0.1134551857948054
LKKRGLGG	8	Unmodified	_LKKRGLGG_					0	0	0			REV__ENST00000512375.1_1_4:84377137-84378237:+|nuORF	REV__ENST00000512375.1_1_4:84377137-84378237:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	414.774337	827.534121	1.1543	0.00047876	9.3206	0.0038659	10.475	0.0043447	414.77862877372087	88.667	0.51594	88.594	88.32	88.836	-0.073135	-0.037855	0.00043659	NaN	35.201	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47917	+		29121	20897	19484	19494							0.1134551857948054
LKKRGLGG	8	Unmodified	_LKKRGLGG_					0	0	0			REV__ENST00000512375.1_1_4:84377137-84378237:+|nuORF	REV__ENST00000512375.1_1_4:84377137-84378237:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	414.774337	827.534121	-1.0726	-0.00044487	6.6509	0.0027586	5.5784	0.0023138	414.77715689718343	88.219	0.39148	88.682	88.437	88.829	0.46312	0.05087	-0.001778	NaN	35.201	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69250	+		29122	20897	19484	19494							0.1134551857948054
LKKRKKKKW	9	Unmodified	_LKKRKKKKW_					0	0	0		chr2:202300813-202302921|18|151.11|0.53|8.15|+|0|None,NOP58|2	chr2:202300813-202302921|18|151.11|0.53|8.15|+|0|None,NOP58|2	chr2:202300813-202302921|18|151.11|0.53|8.15|+|0|None,NOP58|2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.846923828125	2	621.929692	1241.84483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.064	1	29.177	28.677	29.677	0.11225								0	0	0	0.35896	1	1223	1223		12.207	0	1				29123	324	19485	19495	33182	33182					0.2335821323529217
LKKRKRKER	9	Unmodified	_LKKRKRKER_					0	0	0		ENST00000334197.11_2_19:53652513-53662282:-|nuORF	ENST00000334197.11_2_19:53652513-53662282:-|nuORF	ENST00000334197.11_2_19:53652513-53662282:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3923950195312	2	621.41748	1240.82041	0.921	0.00057233	-3.634	-0.0022582	-2.713	-0.0016859	621.4152709811963	104.31	0.31759	104.43	104.24	104.56	0.11685					10	7	2	0	0	0	0.20789	1	11081	11081		20.947	5.3051	1	82631			29124	10145	19486	19496	33183	33183					0.209629530817665
LKKRLEEP	8	Unmodified	_LKKRLEEP_					0	0	0			REV__nc|ENSG00000071794|Q14527-2|HLTF	REV__nc|ENSG00000071794|Q14527-2|HLTF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.79998779296875	2	506.811116	1011.60768	0.38952	0.00019741	-1.6837	-0.00085334	-1.2942	-0.00065592	506.8102710895861	54.303	0.50426	54.385	53.959	54.463	0.081524					16	12	2	0	0	0	0.4196	1	4451	4451		20.947	0	1	74548	+		29125	16628	19487	19497	33184	33184					0.10234022231270501
LKKSFISKRKS	11	Unmodified	_LKKSFISKRKS_					0	0	0		ENST00000242719.3_1_1:51738308-51738467:+|nuORF	ENST00000242719.3_1_1:51738308-51738467:+|nuORF	ENST00000242719.3_1_1:51738308-51738467:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7871398925781	3	441.281995	1320.82415	0.23832	0.00010516	1.3905	0.00061361	1.6288	0.00071877	441.2823456462782	44.922	0.1311	44.971	44.861	44.992	0.048996					4	2	2	0	0	0	0.17882	1	3191	3191		11.455	5.4536	1	25444			29126	9254	19488	19498	33185	33185					0.17657578064972768
LKKSMKRRKRS	11	Unmodified	_LKKSMKRRKRS_					0	0	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	473.29901123046875	3	473.301395	1416.88236	-0.89168	-0.00042203	-4.4715	-0.0021164	-5.3632	-0.0025384	473.2991519032533	107.53	0.67749	107.66	107.32	107.99	0.13867					65	16	5	0	0	0	0.75779	1	11551	11551		20.315	6.8071	1	4814600	+		29127	16148	19489	19499	33186	33186					0.19058936438591445
LKKSMKRRKRS	11	Unmodified	_LKKSMKRRKRS_					0	0	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.2993469238281	3	473.301395	1416.88236	-1.7019	-0.00080553	-3.0276	-0.001433	-4.7296	-0.0022385	473.2998390054578	107.66	0.60316	107.7	107.33	107.93	0.036125					45	14	5	0	0	0	0.79224	1	11494	11494		12.957	1.0251	1	2578500	+		29128	16148	19489	19499	33187	33187					0.19058936438591445
LKKTNKQTT	9	Unmodified	_LKKTNKQTT_					0	0	0		nc|ENSG00000186960|Q86U37|LINC01551;ENST00000399387.8_1_14:29242013-29261464:+|nuORF	nc|ENSG00000186960|Q86U37|LINC01551	nc|ENSG00000186960|Q86U37|LINC01551	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.3186645507812	2	531.319306	1060.62406	-0.6637	-0.00035264	0.93655	0.00049761	0.27285	0.00014497	531.319555565115	95.322	2.6544	95.322	94.812	97.466	0					162	61	5	0	0	0	0.7932	1	9457	9457		23.042	0	1	1864100			29129	11202	19490	19500	33188	33188					0.0961710339736328
LKKTNKQTT	9	Unmodified	_LKKTNKQTT_					0	0	0		nc|ENSG00000186960|Q86U37|LINC01551;ENST00000399387.8_1_14:29242013-29261464:+|nuORF	nc|ENSG00000186960|Q86U37|LINC01551	nc|ENSG00000186960|Q86U37|LINC01551	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.3187866210938	2	531.319306	1060.62406	1.2436	0.00066073	-1.246	-0.000662	-0.0023897	-1.2697E-06	531.3184005268905	94.973	2.3333	95.019	94.535	96.868	0.046173					183	54	5	0	0	0	0.7932	1	10068	10068		26.693	1.1189	1	4128600			29130	11202	19490	19500	33189	33189					0.0961710339736328
LKKTVLSAM	9	Unmodified	_LKKTVLSAM_					0	0	0		ENST00000323646.9_1_11:63342359-63342416:-|nuORF	ENST00000323646.9_1_11:63342359-63342416:-|nuORF	ENST00000323646.9_1_11:63342359-63342416:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	495.80633544921875	2	495.804445	989.594338	1.5878	0.00078725	2.1548	0.0010684	3.7426	0.0018556	495.8054984304761	91.127	1.9829	91.06	90.603	92.586	-0.067085					94	47	4	0	0	0	0.64922	1	9596	9596		44.117	11.304	1	755260			29131	10053	19491	19501	33190	33190					0.09912448127670359
LKKTVLSAM	9	Unmodified	_LKKTVLSAM_					0	0	0		ENST00000323646.9_1_11:63342359-63342416:-|nuORF	ENST00000323646.9_1_11:63342359-63342416:-|nuORF	ENST00000323646.9_1_11:63342359-63342416:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	495.8056335449219	2	495.804445	989.594338	-0.57843	-0.00028679	4.158	0.0020616	3.5796	0.0017748	495.8065674866226	90.9	1.4324	91.118	90.67	92.103	0.21737					54	34	2	0	0	0	0.67345	1	9132	9132		42.396	8.9032	1	512070			29132	10053	19491	19501	33191	33191					0.09912448127670359
LKKVGLKRA	9	Unmodified	_LKKVGLKRA_					0	0	0			REV__ENSG00000101751|ENST00000579534|POLI	REV__ENSG00000101751|ENST00000579534|POLI	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30999755859375	2	506.853119	1011.69168	0.80936	0.00041023	-1.3411	-0.00067973	-0.53171	-0.0002695	506.85238519768393	109.03	0.42696	109.11	108.88	109.31	0.078552					34	19	2	0	0	0	0.20789	1	11750	11750		3.41	0	1	870000	+		29133	17300	19492	19502	33192	33192					0.18630598118841135
LKKVKVQLQCV	11	Unmodified	_LKKVKVQLQCV_					0	0	0		ENSG00000149735|ENST00000279168|GPHA2	ENSG00000149735|ENST00000279168|GPHA2	ENSG00000149735|ENST00000279168|GPHA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4051513671875	2	643.404858	1284.79516	2.6785	0.0017233	-1.0241	-0.00065892	1.6544	0.0010644	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.6921	1	11610	11610		32.812	0	1	14704000			29134	5047	19493	19503	33193	33193					0.16415717444328948
LKKVKVQLQCV	11	Unmodified	_LKKVKVQLQCV_					0	0	0		ENSG00000149735|ENST00000279168|GPHA2	ENSG00000149735|ENST00000279168|GPHA2	ENSG00000149735|ENST00000279168|GPHA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4057006835938	2	643.404858	1284.79516	1.7783	0.0011441	-0.042907	-2.7607E-05	1.7353	0.0011165	643.4046886151041	105.77	1.7293	105.8	105.04	106.77	0.038322					167	40	5	0	0	0	0.72918	1	11486	11486		26.693	1.1189	1	14066000			29135	5047	19493	19503	33194	33194					0.16415717444328948
LKKVKVQLQCV	11	Unmodified	_LKKVKVQLQCV_					0	0	0		ENSG00000149735|ENST00000279168|GPHA2	ENSG00000149735|ENST00000279168|GPHA2	ENSG00000149735|ENST00000279168|GPHA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4043579101562	2	643.404858	1284.79516	1.6039	0.001032	0.24014	0.00015451	1.8441	0.0011865	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.68378	1	11565	11565		34.173	10.65	1	21138000			29136	5047	19493	19503	33195	33195					0.16415717444328948
LKKVKVQLQCV	11	Unmodified	_LKKVKVQLQCV_					0	0	0		ENSG00000149735|ENST00000279168|GPHA2	ENSG00000149735|ENST00000279168|GPHA2	ENSG00000149735|ENST00000279168|GPHA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.40576171875	2	643.404858	1284.79516	0.94326	0.0006069	0.46246	0.00029755	1.4057	0.00090445	643.4049918963857	105.64	1.1738	105.75	104.98	106.16	0.10766					144	29	6	0	0	0	0.61774	1	11262	11262		42.396	0	1	23114000			29137	5047	19493	19503	33196	33196					0.16415717444328948
LKKVKVQLQCV	11	Unmodified	_LKKVKVQLQCV_					0	0	0		ENSG00000149735|ENST00000279168|GPHA2	ENSG00000149735|ENST00000279168|GPHA2	ENSG00000149735|ENST00000279168|GPHA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.406494140625	2	643.404858	1284.79516	0.94326	0.0006069	1.5771	0.0010147	2.5204	0.0016216	643.4057417471539	106.19	1.8486	106.29	106.11	107.96	0.099007					180	44	5	0	0	0	0.68378	1	11490	11490		34.173	0.25091	1	16037000			29138	5047	19493	19503	33197	33197					0.16415717444328948
LKKVPHLR	8	Unmodified	_LKKVPHLR_					0	0	0			REV__L1MA1_dup2411|chrX:76191796-76193207:-|1.3734964326863903|0.4902543273978149|1.49|63.0|3|1|sense	REV__L1MA1_dup2411|chrX:76191796-76193207:-|1.3734964326863903|0.4902543273978149|1.49|63.0|3|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.8352966308594	2	495.832186	989.649819	0.95462	0.00047333	4.1677	0.0020665	5.1224	0.0025398	495.8341240060595	34.157	0.93153	34.461	34.241	35.173	0.30494					47	22	3	0	0	0	0.79929	1	2531	2531		18.324	8.8539	1	543640	+		29139	29461	19494	19504	33198	33198					0.15458042430304886
LKKYFNRKRLL	11	Unmodified	_LKKYFNRKRLL_					0	0	0			REV__ENSG00000100665|ENST00000557004|SERPINA4	REV__ENSG00000100665|ENST00000557004|SERPINA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.6487731933594	3	493.648789	1477.92454	0.24426	0.00012058	1.3092	0.00064627	1.5534	0.00076685	493.6494164548298	44.568	2.4513	44.545	43.895	46.346	-0.023079					82	57	2	0	0	0	0.81892	1	3530	3530		8.0344	1.3747	1	516410	+		29140	17213	19495	19505	33199	33199					0.2046923511861678
LKKYFNRKRLL	11	Unmodified	_LKKYFNRKRLL_					0	0	0			REV__ENSG00000100665|ENST00000557004|SERPINA4	REV__ENSG00000100665|ENST00000557004|SERPINA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.9862976074219	3	493.648789	1477.92454	0.3003	0.00014824	2.0847	0.0010291	2.385	0.0011774	493.9841677291236	45.426	1.1794	45.469	45.194	46.373	0.042599					76	31	3	0	0	0	0.8498	1	3296	3296		6.001	2.382	1	182700	+		29141	17213	19495	19505	33200	33200					0.2046923511861678
LKLAKPAKKKK	11	Unmodified	_LKLAKPAKKKK_					0	0	0			REV__nc|ENSG00000182329|Q0VF49|KIAA2012	REV__nc|ENSG00000182329|Q0VF49|KIAA2012	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.2969665527344	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.516	1	66.526	66.026	67.026	0.010452								0	0	0	0.56276	1	6236	6236		8.4073	0	1		+		29142	22518	19496	19506	33201	33201					0.25959946829652836
LKLAKPAKKKK	11	Unmodified	_LKLAKPAKKKK_					0	0	0			REV__nc|ENSG00000182329|Q0VF49|KIAA2012	REV__nc|ENSG00000182329|Q0VF49|KIAA2012	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.298583984375	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.362	1	66.327	65.827	66.827	-0.035217								0	0	0	0.56276	1	6344	6344		8.7993	1.3996	1		+		29143	22518	19496	19506	33202	33202					0.25959946829652836
LKLATGMG	8	Oxidation (M)	_LKLATGM(Oxidation (M))G_		LKLATGM(1)G		LKLATGM(58)G	0	0	1			REV__ENST00000546217.1_1_12:7079496-7079730:-|nuORF	REV__ENST00000546217.1_1_12:7079496-7079730:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.7240905761719	2	403.725664	805.436775	0.40958	0.00016536	-4.2515	-0.0017164	-3.8419	-0.0015511	403.72380872064997	64.881	1.7093	65.005	63.854	65.563	0.12396					144	69	3	0	0	0	0.88944	1	5705	5705		57.811	9.8957	1	1091100	+		29144	23672	19497	19507	33203	33203		367			0.02627368588309764
LKLDPLGP	8	Unmodified	_LKLDPLGP_					0	0	0		nc|ENSG00000184507|Q86Y26|NUTM1;nc|ENSG00000184507|Q86Y26-3|NUTM1;ENSG00000184507|ENST00000537011|NUTM1	nc|ENSG00000184507|Q86Y26|NUTM1	nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.30267333984375	2	426.763104	851.511654	0.46467	0.00019831	2.8393	0.0012117	3.3039	0.00141	426.76417512734236	70.86	0.82709	70.989	70.596	71.423	0.12965					48	39	2	0	0	0	0.4196	1	6425	6425		23.042	4.7181	1	71512			29145	7618	19498	19508	33204	33204					0.07995874391178859
LKLFNRLLH	9	Unmodified	_LKLFNRLLH_					0	0	0			REV__ENST00000531443.5_1_8:107696561-107715155:+|nuORF	REV__ENST00000531443.5_1_8:107696561-107715155:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3673095703125	2	577.36385	1152.71315	0.64819	0.00037424	3.8293	0.0022109	4.4775	0.0025852	577.3659582171192	102.04	3.0704	102.23	101.84	104.91	0.19484					206	76	5	0	0	0	0.7932	1	10863	10863		23.042	2.0956	1	17266000	+		29146	28300	19499	19509	33205	33205					0.1428998314756882
LKLFNRLLH	9	Unmodified	_LKLFNRLLH_					0	0	0			REV__ENST00000531443.5_1_8:107696561-107715155:+|nuORF	REV__ENST00000531443.5_1_8:107696561-107715155:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	577.3674926757812	2	577.36385	1152.71315	0.87835	0.00050713	3.6055	0.0020817	4.4839	0.0025888	577.3658132315567	102.16	3.1638	102.3	101.85	105.01	0.13522					236	78	5	0	0	0	0.7932	1	10879	10879		25.45	2.4077	1	15036000	+		29147	28300	19499	19509	33206	33206					0.1428998314756882
LKLFRRYRSA	10	Unmodified	_LKLFRRYRSA_					0	0	0			REV__ENSG00000137288|ENST00000607484|UQCC2	REV__ENSG00000137288|ENST00000607484|UQCC2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.267333984375	3	437.266568	1308.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.481	1	23.541	23.041	24.041	0.060431								0	0	0	0.45132	1	782	782		29.17	4.9382	1		+		29148	19376	19500	19510	33207	33207					0.13583557953552372
LKLGIWGGN	9	Unmodified	_LKLGIWGGN_					0	0	0		nc|ENSG00000129003|Q709C8-2|VPS13C;ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2786865234375	2	479.279452	956.544351	-1.6824	-0.00080636	-1.8284	-0.0008763	-3.5108	-0.0016827	479.27847474048673	97.333	1.1091	97.535	97.052	98.161	0.20206					56	25	3	0	0	0	0.76255	1	9989	9989		35.618	4.0885	1	515040			29149	3570	19501	19511	33208	33208					0.0643408151404401
LKLGNLFLN	9	Unmodified	_LKLGNLFLN_					0	0	0		ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENSG00000166851|ENST00000300093|PLK1	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.8147583007812	2	516.316035	1030.61752	-0.046988	-2.426E-05	-3.225	-0.0016651	-3.2719	-0.0016894	516.3143957799225	103.64	1.2184	103.63	103.07	104.29	-0.0035706					70	29	3	0	0	0	0.7932	1	11227	11227		21.96	0	1	638740			29150	13846	19502	19512	33209	33209					0.10343210236646883
LKLHAFKT	8	Unmodified	_LKLHAFKT_					0	0	0			REV__ENSG00000068354|ENST00000376771|TBC1D25	REV__ENSG00000068354|ENST00000376771|TBC1D25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2981262207031	2	479.297645	956.580737	-0.25174	-0.00012066	0.42964	0.00020592	0.1779	8.5265E-05	479.2977080659384	57.467	1.4488	58.023	57.642	59.091	0.55512					79	35	4	0	0	0	0.89962	1	6007	6007		38.806	1.647	1	5116300	+		29151	16557	19503	19513	33210	33210					0.10070958410744879
LKLHHLPV	8	Unmodified	_LKLHHLPV_					0	0	0			REV__ENST00000349457.7_1_16:57608924-57609494:+|nuORF	REV__ENST00000349457.7_1_16:57608924-57609494:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.80523681640625	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.519	1	42.474	41.974	42.974	-0.045467								0	0	0	0.30125	1	2861	2861		20.482	3.1169	1		+		29152	25333	19504	19514	33211	33211					0.11714664647649897
LKLHTFESH	9	Unmodified	_LKLHTFESH_					0	0	0		ENSG00000102054|ENST00000380087|RBBP7;nc|ENSG00000102054|Q16576-2|RBBP7	ENSG00000102054|ENST00000380087|RBBP7	ENSG00000102054|ENST00000380087|RBBP7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	556.2989501953125	2	556.298373	1110.58219	-1.0007	-0.00055668	0.90859	0.00050545	-0.092098	-5.1234E-05	556.2983739698411	75.821	0.53299	75.909	75.653	76.186	0.087631					21	13	2	0	0	0	0.76764	1	7049	7049		34.173	3.6689	1	92261			29153	1985	19505	19515	33212	33212					0.03132547708855782
LKLIQGNNPRV	11	Unmodified	_LKLIQGNNPRV_					0	0	0		ENSG00000183347|ENST00000370456|GBP6	ENSG00000183347|ENST00000370456|GBP6	ENSG00000183347|ENST00000370456|GBP6	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3812866210938	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.35	1	117.27	116.77	117.77	-0.082458								0	0	0	0.56276	1	12627	12627		24.519	4.5224	1				29154	7526	19506	19516	33213	33213					0.1305614547973164
LKLKEIKEQH	10	Unmodified	_LKLKEIKEQH_					0	0	0		ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5926513671875	3	422.590717	1264.75032	1.3012	0.00054986	3.2682	0.0013811	4.5693	0.001931	422.59197853531197	58.619	1.7414	58.653	57.951	59.692	0.033905					114	50	3	0	0	0	0.86207	1	5445	5445		24.232	1.6702	1	112420			29155	8529	19507	19517	33214	33214					0.12853609902640528
LKLKKIIYG	9	Unmodified	_LKLKKIIYG_					0	0	0			REV__ENST00000532388.5_1_8:70617264-70744908:-|nuORF	REV__ENST00000532388.5_1_8:70617264-70744908:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267822265625	2	538.365527	1074.7165	3.4195	0.0018409	-3.4116	-0.0018367	0.0078111	4.2052E-06	538.3633701309028	101.04	0.78021	100.99	100.62	101.4	-0.052116					32	18	3	0	0	0	0.20789	1	11001	11001		6.7355	0	1	199250	+		29156	19392	19508	19518	33215	33215					0.18213233201549883
LKLKLCLRF	9	Unmodified	_LKLKLCLRF_					0	0	0		ENST00000412485.1_1_X:13284980-13285373:-|nuORF	ENST00000412485.1_1_X:13284980-13285373:-|nuORF	ENST00000412485.1_1_X:13284980-13285373:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.363525390625	2	567.365004	1132.71546	-1.4485	-0.00082182	-1.7679	-0.0010031	-3.2164	-0.0018249	567.3639779227798	42.372	2.1865	42.806	41.562	43.749	0.4334					145	55	5	0	0	0	0.7932	1	3763	3763		17.365	0	1	13610000			29157	11339	19509	19519	33216	33216					0.15440695561005668
LKLKLKFW	8	Unmodified	_LKLKLKFW_					0	0	0			REV__ENST00000412485.1_1_X:13284980-13285373:-|nuORF	REV__ENST00000412485.1_1_X:13284980-13285373:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3272094726562	2	538.354963	1074.69537	1.8199	0.00097975	1.7413	0.00093746	3.5612	0.0019172	538.3552499006571	100.73	0.24025	101.08	100.98	101.22	0.34591					7	5	2	0	0	0	0.4196	1	12252	12252		12.959	0	1	42542	+		29158	26381	19510	19520	33217	33217					0.16101267892690885
LKLKSSDS	8	Unmodified	_LKLKSSDS_					0	0	0		nc|ENSG00000147526|O75410-7|TACC1	nc|ENSG00000147526|O75410-7|TACC1	nc|ENSG00000147526|O75410-7|TACC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	439.2526550292969	2	439.2531	876.491647	-0.15804	-6.9419E-05	-0.5201	-0.00022845	-0.67814	-0.00029787	439.25283253687115	90.959	2.4133	91.028	90.47	92.884	0.069328					111	57	3	0	0	0	0.87064	1	9378	9378		29.15	1.2673	1	1503300			29159	14979	19511	19521	33218	33218					0.04846078660580133
LKLKVSLPPSE	11	Unmodified	_LKLKVSLPPSE_					0	0	0		ENSG00000122477|ENST00000370137|LRRC39;nc|ENSG00000122477|Q96DD0-2|LRRC39	ENSG00000122477|ENST00000370137|LRRC39	ENSG00000122477|ENST00000370137|LRRC39	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.87255859375	2	605.873914	1209.73327	-0.046166	-2.7971E-05	-3.0583	-0.0018529	-3.1044	-0.0018809	605.8718844200029	100.18	2.006	100.22	99.762	101.77	0.046349					129	46	5	0	0	0	0.76699	1	10820	10820		18.262	0.79408	1	1666000			29160	3226	19512	19522	33219	33219					0.13679689296827746
LKLLAPKASRP	11	Unmodified	_LKLLAPKASRP_					0	0	0			REV__nc|ENSG00000132470|P16144-3|ITGB4	REV__nc|ENSG00000132470|P16144-3|ITGB4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3903198242188	2	597.390065	1192.76558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.01	1	116.95	116.45	117.45	-0.064972								0	0	0	0.56276	1	14002	14002		12.812	1.3007	1		+		29161	29845	19513	19523	33220	33220					0.17690521490499123
LKLLLDAP	8	Unmodified	_LKLLLDAP_					0	0	0		ENSG00000099958|ENST00000318109|DERL3;ENST00000464034.5_1_22:24179058-24179882:-|nuORF	ENSG00000099958|ENST00000318109|DERL3	ENSG00000099958|ENST00000318109|DERL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7879943847656	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.85277	1	2992	2992		25.45	4.9683	1	11085000			29162	1778	19514	19524	33221	33221					0.11308733942314575
LKLLLDAP	8	Unmodified	_LKLLLDAP_					0	0	0		ENSG00000099958|ENST00000318109|DERL3;ENST00000464034.5_1_22:24179058-24179882:-|nuORF	ENSG00000099958|ENST00000318109|DERL3	ENSG00000099958|ENST00000318109|DERL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.787841796875	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.884	1	2394	2394		33.516	6.7195	1	11532000			29163	1778	19514	19524	33222	33222					0.11308733942314575
LKLLLPGLLL	10	Unmodified	_LKLLLPGLLL_					0	0	0		nc|ENSG00000271605|Q7Z6M3-2|MILR1;nc|ENSG00000271605|Q7Z6M3-3|MILR1;ENSG00000271605|ENST00000619286|MILR1	nc|ENSG00000271605|Q7Z6M3-2|MILR1	nc|ENSG00000271605|Q7Z6M3-2|MILR1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.83984375	2	546.891378	1091.7682	0.1945	0.00010637	-1.3066	-0.00071456	-1.1121	-0.00060819	546.8904751757105	100.72	0.11933	100.93	100.84	100.96	0.20826					4	2	2	0	0	0	0.37624	1	10537	10537		12.207	5.0135	1	61863			29164	8981	19515	19525	33223	33223					0.2259897689546051
LKLLPLDTY	9	Unmodified	_LKLLPLDTY_					0	0	0		ENSG00000148803|ENST00000278025|FUOM;ENST00000478895.1_1_10:135169240-135170497:-|nuORF;nc|ENSG00000148803|A2VDF0-2|FUOM	ENSG00000148803|ENST00000278025|FUOM	ENSG00000148803|ENST00000278025|FUOM	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3253173828125	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.6	1	113.58	113.08	114.08	-0.024811								0	0	0	0.31828	1	12571	12571		24.203	4.8428	1				29165	4983	19516	19526	33224	33224					0.09816657313990618
LKLLRKEV	8	Unmodified	_LKLLRKEV_					0	0	0		ENST00000552289.1_1_2:144276912-144276945:+|nuORF	ENST00000552289.1_1_2:144276912-144276945:+|nuORF	ENST00000552289.1_1_2:144276912-144276945:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	499.9501037597656	2	499.839677	997.664801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.837	1	29.849	29.349	30.349	0.01123								0	0	0	0.30125	1	1283	1283		20.482	0	1				29166	13679	19517	19527	33225	33225					0.16587489507651298
LKLLRSSTLE	10	Unmodified	_LKLLRSSTLE_					0	0	0			REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.3563842773438	2	580.355888	1158.69722	-0.33893	-0.0001967	0.36256	0.00021041	0.023626	1.3712E-05	580.3559756661498	21.173	0.6302	20.714	20.461	21.091	-0.4591					22	14	2	0	0	0	0.86047	1	730	730		23.523	0	1	101510	+		29167	18112	19518	19528	33226	33226					0.12422232119979526
LKLLVLGG	8	Unmodified	_LKLLVLGG_					0	0	0		ENST00000313368.7_1_5:140699061-140699091:-|nuORF	ENST00000313368.7_1_5:140699061-140699091:-|nuORF	ENST00000313368.7_1_5:140699061-140699091:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78411865234375	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.81548	1	1303	1303		20.482	0	1	1410200			29168	9950	19519	19529	33227	33227					0.13981055150509292
LKLPPLCG	8	Unmodified	_LKLPPLCG_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.75457763671875	2	420.754224	839.493896	0.5028	0.00021155	1.6757	0.00070504	2.1785	0.00091659	420.754847228136	20.716	1.1231	20.695	19.83	20.953	-0.020922					79	56	2	0	0	0	0.87276	1	514	514		29.842	8.1392	1	122120	+		29169	22085	19520	19530	33228	33228					0.06772835864671833
LKLPPPQG	8	Unmodified	_LKLPPPQG_					0	0	0		ENSG00000141664|ENST00000269499|ZCCHC2;ENST00000587612.1_1_18:60241735-60242571:+|nuORF;nc|ENSG00000141664|Q9C0B9-2|ZCCHC2	ENSG00000141664|ENST00000269499|ZCCHC2	ENSG00000141664|ENST00000269499|ZCCHC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.3050842285156	2	425.263271	848.511988	1.2019	0.00051113	-1.5337	-0.00065224	-0.3318	-0.0001411	425.2624151662446	23.463	0.64193	22.889	22.62	23.262	-0.57415					20	14	2	0	0	0	0.4196	1	1039	1039		25.45	10.786	1	144290			29170	4522	19521	19531	33229	33229					0.08167294111046886
LKLPPSTS	8	Unmodified	_LKLPPSTS_					0	0	0			REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.75128173828125	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.721	1	75.767	75.267	76.267	0.045959								0	0	0	0.29755	1	7288	7288		24.203	1.1603	1		+		29171	18583	19522	19532	33230	33230					0.06383284011531032
LKLQNRGT	8	Unmodified	_LKLQNRGT_					0	0	0		ENST00000474661.5_1_13:37574949-37576641:+|nuORF	ENST00000474661.5_1_13:37574949-37576641:+|nuORF	ENST00000474661.5_1_13:37574949-37576641:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.2804260253906	2	465.279983	928.545414	-1.728	-0.00080402	1.7949	0.00083513	0.066852	3.1105E-05	465.28067924301723	88.748	2.0508	88.921	88.498	90.549	0.17234					103	47	4	0	0	0	0.80706	1	8760	8760		19.36	0	1	1028800			29172	12308	19523	19533	33231	33231					0.07828295882939074
LKLRDDIKN	9	Unmodified	_LKLRDDIKN_					0	0	0			REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.832275390625	2	557.83258	1113.65061	0.055659	3.1049E-05	-0.17644	-9.8421E-05	-0.12078	-6.7373E-05	557.8323863083609	20.23	0.34261	20.301	20.141	20.484	0.071127					22	13	2	0	0	0	0.78058	1	481	481		30.504	0	1	80845	+		29173	17874	19524	19534	33232	33232					0.09832792288693781
LKLRGGVLHTN	11	Unmodified	_LKLRGGVLHTN_					0	0	0			REV__ENST00000542104.5_2_12:65090281-65090509:+|nuORF	REV__ENST00000542104.5_2_12:65090281-65090509:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3665771484375	2	604.367121	1206.71969	-0.16822	-0.00010167	-0.91026	-0.00055013	-1.0785	-0.0006518	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.68532	1	10989	10989		33.922	3.6039	1	47715000	+		29174	28494	19525	19535	33233	33233					0.12459876308275852
LKLRGGVLHTN	11	Unmodified	_LKLRGGVLHTN_					0	0	0			REV__ENST00000542104.5_2_12:65090281-65090509:+|nuORF	REV__ENST00000542104.5_2_12:65090281-65090509:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3663940429688	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.60687	1	11357	11357		43.651	3.5926	1	64334000	+		29175	28494	19525	19535	33234	33234					0.12459876308275852
LKLRGGVLHTN	11	Unmodified	_LKLRGGVLHTN_					0	0	0			REV__ENST00000542104.5_2_12:65090281-65090509:+|nuORF	REV__ENST00000542104.5_2_12:65090281-65090509:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3646850585938	2	604.367121	1206.71969	1.0495	0.00063426	-2.1403	-0.0012935	-1.0908	-0.00065925	604.3654815369778	107.84	0.75342	107.98	107.32	108.07	0.13866					71	18	5	0	0	0	0.7434	1	11578	11578		23.523	2.5758	1	18755000	+		29176	28494	19525	19535	33235	33235					0.12459876308275852
LKLRPLPIA	9	Unmodified	_LKLRPLPIA_					0	0	0			REV__nc|ENSG00000165555|Q6NXP6-2|NOXRED1	REV__nc|ENSG00000165555|Q6NXP6-2|NOXRED1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.8500061035156	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.81	1	114.74	114.24	115.24	-0.07								0	0	0	0.36199	1	12404	12404		7.6903	0.49693	1		+		29177	21195	19526	19536	33236	33236					0.1764807988731718
LKLRQMKQDV	10	Unmodified	_LKLRQMKQDV_					0	0	0		ENST00000320985.14_1_10:31750007-31791278:+|nuORF	ENST00000320985.14_1_10:31750007-31791278:+|nuORF	ENST00000320985.14_1_10:31750007-31791278:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2491760253906	3	420.248185	1257.72273	-0.39505	-0.00016602	-1.3367	-0.00056174	-1.7317	-0.00072776	420.2476950332521	46.087	0.49104	46.008	45.799	46.29	-0.079006					17	14	2	0	0	0	0.86549	1	3390	3390		29.551	1.4693	1	70403			29178	10034	19527	19537	33237	33237					0.10417383370759126
LKLRSPRLLLL	11	Unmodified	_LKLRSPRLLLL_					0	0	0			REV__ENST00000555988.1_2_14:75356010-75360059:+|nuORF	REV__ENST00000555988.1_2_14:75356010-75360059:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7876281738281	3	441.306252	1320.89693	-1.8528	-0.00081766	-0.93032	-0.00041056	-2.7831	-0.0012282	441.64039359923845	41.65	1.1694	41.65	41.401	42.57	0					39	28	2	0	0	0	0.17911	1	2802	2802		13.508	3.404	1	85280	+		29179	28690	19528	19538	33238	33238					0.2493133185841998
LKLSFHLNLPS	11	Unmodified	_LKLSFHLNLPS_					0	0	0		ENST00000586562.5_1_17:43553294-43559850:-|nuORF	ENST00000586562.5_1_17:43553294-43559850:-|nuORF	ENST00000586562.5_1_17:43553294-43559850:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8767700195312	2	634.871705	1267.72886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.22	1	116.18	115.68	116.68	-0.037872								0	0	0	0.56276	1	13948	13948		42.864	0	1				29180	14170	19529	19539	33239	33239					0.1057022487393624
LKLTAEARARA	11	Unmodified	_LKLTAEARARA_					0	0	0			REV__ENSG00000158417|ENST00000289371|EIF5B	REV__ENSG00000158417|ENST00000289371|EIF5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9162292480469	3	400.578811	1198.7146	3.4037	0.0013634	1.0118	0.0004053	4.4155	0.0017688	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.76579	1	13554	13554		18.531	0.69791	1	5321000	+		29181	20604	19530	19540	33240	33240					0.12319572445653648
LKLTEEVRRLN	11	Unmodified	_LKLTEEVRRLN_					0	0	0			REV__nc|ENSG00000138778|Q02224-3|CENPE	REV__nc|ENSG00000138778|Q02224-3|CENPE	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79278564453125	3	457.608659	1369.80415	0.071792	3.2853E-05	-0.53348	-0.00024413	-0.46169	-0.00021127	457.6083291797804	38.459	0.63624	38.431	38.084	38.72	-0.027843					24	14	2	0	0	0	0.17334	1	2575	2575		27.644	9.8108	1	85652	+		29182	15815	19531	19541	33241	33241					0.13403782334376046
LKLTRLHC	8	Unmodified	_LKLTRLHC_					0	0	0			REV__nc|ENSG00000179873|P59045-3|NLRP11	REV__nc|ENSG00000179873|P59045-3|NLRP11	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.2953186035156	2	492.294579	982.574605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.266	1	65.391	64.891	65.891	0.12532								0	0	0	0.29264	1	5796	5796		29.15	0	1		+		29183	22361	19532	19542	33242	33242					0.08262116907576456
LKLVLIGG	8	Unmodified	_LKLVLIGG_					0	0	0		ENSG00000253710|ENST00000521508|ALG11	ENSG00000253710|ENST00000521508|ALG11	ENSG00000253710|ENST00000521508|ALG11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7856140136719	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.80706	2	1302	1302;1307		20.482	0	1	1286900			29184	8864	19533	19543	33243;33244	33243					0.1398105515053203
LKLWNLQKAV	10	Unmodified	_LKLWNLQKAV_					0	0	0		ENST00000595357.5_1_19:47225490-47234099:-|nuORF;ENSG00000090372|ENST00000263280|STRN4;nc|ENSG00000090372|Q9NRL3-3|STRN4	ENST00000595357.5_1_19:47225490-47234099:-|nuORF	ENST00000595357.5_1_19:47225490-47234099:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.9231872558594	3	404.920286	1211.73903	2.788	0.0011289	3.7066	0.0015009	6.4947	0.0026298	404.92169157251993	26.492	2.181	26.459	26.021	28.202	-0.032125					96	52	4	0	0	0	0.85285	1	1113	1113		16.717	0.71061	1	297020			29185	1642	19534	19544	33245	33245					0.14162832599163266
LKLYRRRSVY	10	Unmodified	_LKLYRRRSVY_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.94317626953125	3	451.941973	1352.80409	-0.53385	-0.00024127	3.0718	0.0013883	2.538	0.001147	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.85633	1	4378	4378		21.686	3.9642	1	920720	+		29186	17017	19535	19545	33246	33246					0.1417982712500816
LKMKMKRH	8	Oxidation (M)	_LKM(Oxidation (M))KMKRH_		LKM(0.994)KM(0.006)KRH		LKM(22)KM(-22)KRH	0	0	1			REV__chr7:11164391-11169416|38|21.42|0.47|5.51|+|1|None,PHF14|1	REV__chr7:11164391-11169416|38|21.42|0.47|5.51|+|1|None,PHF14|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.3145751953125	2	544.314989	1086.61542	1.02	0.00055518	-2.4775	-0.0013485	-1.4575	-0.00079335	544.3134383618751	17.152	0.20255	17.07	16.966	17.169	-0.0821					13	7	2	0	0	0	0.91005	1	211	211		42.474	6.8562	2	97394	+		29187	15898	19536	19546	33247	33247		226			0.07558134955547757
LKMNLWKI	8	Unmodified	_LKMNLWKI_					0	0	0		ENST00000494860.5_1_11:112064591-112085724:+|nuORF;nc|ENSG00000197580|Q9BYV7-6|BCO2;nc|ENSG00000197580|Q9BYV7-5|BCO2;nc|ENSG00000197580|Q9BYV7-4|BCO2;nc|ENSG00000197580|Q9BYV7-2|BCO2;ENSG00000197580|ENST00000357685|BCO2	ENST00000494860.5_1_11:112064591-112085724:+|nuORF	ENST00000494860.5_1_11:112064591-112085724:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.316162109375	2	523.31498	1044.61541	-0.84758	-0.00044355	2.1647	0.0011328	1.3171	0.00068928	523.316031636562	38.743	1.2422	39.265	38.994	40.236	0.52235					46	28	2	0	0	0	0.83456	1	3233	3233		60.972	5.4677	1	430520			29188	8178	19537	19547	33248	33248					0.09488458227178853
LKMRLDWDS	9	Unmodified	_LKMRLDWDS_					0	0	0			REV__ENSG00000167646|ENST00000524407|DNAAF3	REV__ENSG00000167646|ENST00000524407|DNAAF3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3534545898438	2	582.297516	1162.58048	-0.28439	-0.0001656	-3.3517	-0.0019517	-3.6361	-0.0021173	582.7953837024951	103.97	0.16622	103.97	103.88	104.04	0					5	3	2	0	0	0	0.20789	1	10681	10681		23.042	0	1	73038	+		29189	21410	19538	19548	33249	33249					0.005691706285688269
LKMRLHVMES	10	Unmodified	_LKMRLHVMES_					0	0	0			REV__nc|ENSG00000118200|Q08AD1-2|CAMSAP2	REV__nc|ENSG00000118200|Q08AD1-2|CAMSAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3358764648438	2	622.336118	1242.65768	-0.27733	-0.0001726	0.60357	0.00037562	0.32623	0.00020303	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.86698	1	12061	12061		16.473	0	1	419280	+		29190	18296	19539	19549	33250	33250					0.046060655732617306
LKMVRRFV	8	Unmodified	_LKMVRRFV_					0	0	0			REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2	REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.827392578125	2	524.826047	1047.63754	-0.038995	-2.0466E-05	1.6131	0.0008466	1.5741	0.00082613	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.85277	1	10725	10725		25.45	4.9683	1	26414000	+		29191	23206	19540	19550	33251	33251					0.11562682695625881
LKMVRRFV	8	Unmodified	_LKMVRRFV_					0	0	0			REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2	REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8268432617188	2	524.826047	1047.63754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.07	1	102.02	101.52	102.52	-0.049828								0	0	0	0.29498	1	11131	11131		26.796	0.10319	1		+		29192	23206	19540	19550	33252	33252					0.11562682695625881
LKMVRRFV	8	Unmodified	_LKMVRRFV_					0	0	0			REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2	REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8272705078125	2	524.826047	1047.63754	1.2413	0.00065145	0.26523	0.0001392	1.5065	0.00079065	524.8261082044575	99.092	3.5228	99.14	98.41	101.93	0.047852					344	82	7	0	0	0	0.85277	1	10750	10750		25.45	3.4903	1	29910000	+		29193	23206	19540	19550	33253	33253					0.11562682695625881
LKNAIQAF	8	Unmodified	_LKNAIQAF_					0	0	0		nc|ENSG00000151892|P56159-2|GFRA1;ENSG00000151892|ENST00000355422|GFRA1	nc|ENSG00000151892|P56159-2|GFRA1	nc|ENSG00000151892|P56159-2|GFRA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.7678527832031	2	452.766178	903.517802	0.72575	0.00032859	4.1231	0.0018668	4.8489	0.0021954	452.7680266771095	29.969	1.2555	29.954	29.325	30.581	-0.015167					53	34	3	0	0	0	0.86288	1	1522	1522		26.796	1.3459	1	76935			29194	5148	19541	19551	33254	33254					0.06218392622713509
LKNDSPLDY	9	Unmodified	_LKNDSPLDY_					0	0	0		ENSG00000263961|ENST00000331555|RHEX	ENSG00000263961|ENST00000331555|RHEX	ENSG00000263961|ENST00000331555|RHEX	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.3114624023438	2	532.766571	1063.51859	0.85369	0.00045482	-0.9466	-0.00050432	-0.09291	-4.9499E-05	532.7659790818184	33.207	0.21105	33.418	33.271	33.482	0.21168					5	4	2	0	0	0	0.20789	1	2393	2393		21.96	1.4781	1	61784			29195	8941	19542	19552	33255	33255					-0.010628575189002731
LKNLKLDD	8	Unmodified	_LKNLKLDD_					0	0	0		ENST00000540712.1_1_14:50068361-50081211:+|nuORF;ENSG00000165501|ENST00000298288|LRR1	ENST00000540712.1_1_14:50068361-50081211:+|nuORF	ENST00000540712.1_1_14:50068361-50081211:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.7655944824219	2	479.782025	957.549496	0.37558	0.00018019	-1.9322	-0.00092702	-1.5566	-0.00074683	479.78223785551455	80.33	0.12666	80.748	80.675	80.802	0.41738					4	2	2	0	0	0	0.4196	1	9218	9218		30.504	0	1	38332			29196	6088	19543	19553	33256	33256					0.06902340585986622
LKNNVYLKRWI	11	Unmodified	_LKNNVYLKRWI_					0	0	0			REV__ENSG00000147459|ENST00000276440|DOCK5	REV__ENSG00000147459|ENST00000276440|DOCK5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	482.9590148925781	3	482.957511	1445.8507	1.0063	0.00048598	4.2474	0.0020513	5.2536	0.0025373	482.9594620642882	19.053	0.41886	19.127	18.907	19.326	0.073465					30	12	3	0	0	0	0.78391	1	362	362		14.694	0	1	57363	+		29197	20072	19544	19554	33257	33257					0.14561266956297914
LKNQAAEASI	10	Unmodified	_LKNQAAEASI_					0	0	0		nc|ENSG00000141068|Q8IVT5-4|KSR1;nc|ENSG00000141068|Q8IVT5-3|KSR1;nc|ENSG00000141068|Q8IVT5|KSR1;nc|ENSG00000141068|Q8IVT5-2|KSR1;ENSG00000141068|ENST00000644974|KSR1	nc|ENSG00000141068|Q8IVT5-4|KSR1	nc|ENSG00000141068|Q8IVT5-4|KSR1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	522.787838	1043.56112	-1.5	-0.00078417	3.0749	0.0016075	1.575	0.00082337	522.7906697810591	86.731	0.52115	86.895	86.695	87.216	0.16473					17	11	2	0	0	0	0.37624	1	8524	8524		30.318	0	1	48351			29198	14962	19545	19555	33258	33258					0.04108537609317864
LKNTWEIHHKK	11	Unmodified	_LKNTWEIHHKK_					0	0	0		chr10:5773941-5783324|14|91.93|0.56|7.35|-|1|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|21	chr10:5773941-5783324|14|91.93|0.56|7.35|-|1|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|21	chr10:5773941-5783324|14|91.93|0.56|7.35|-|1|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.60406494140625	3	478.605249	1432.79392	-0.30657	-0.00014672	-2.581	-0.0012353	-2.8875	-0.001382	478.60388367454374	15.982	0.20497	15.902	15.803	16.008	-0.080017					19	8	3	0	0	0	0.71207	1	66	66		29.551	6.1728	1	137140			29199	76	19546	19556	33259	33259					0.0948321939977177
LKNVINPIQQL	11	Unmodified	_LKNVINPIQQL_					0	0	0		nc|ENSG00000153237|Q8NFR7-3|CCDC148;nc|ENSG00000153237|Q8NFR7-4|CCDC148;ENST00000451554.1_1_2:159145303-159312956:-|nuORF;ENSG00000153237|ENST00000283233|CCDC148	nc|ENSG00000153237|Q8NFR7-3|CCDC148	nc|ENSG00000153237|Q8NFR7-3|CCDC148	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3922729492188	2	640.390262	1278.76597	-0.0023581	-1.5101E-06	4.4017	0.0028188	4.3993	0.0028173	640.3930794229678	53.7	0.84142	53.695	53.277	54.118	-0.0053711					48	20	3	0	0	0	0.75921	1	4718	4718		19.997	2.5288	1	158160			29200	5226	19547	19557	33260	33260					0.13773896419684206
LKNVKHPF	8	Unmodified	_LKNVKHPF_					0	0	0		nc|ENSG00000288602|Q96BR1-2|SGK3;ENSG00000104205|ENST00000521198|SGK3;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;ENST00000474427.6_1_6:134494022-134494280:-|nuORF;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141|SGK1;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-5|SGK1;ENSG00000118515|ENST00000367858|SGK1	nc|ENSG00000288602|Q96BR1-2|SGK3	nc|ENSG00000288602|Q96BR1-2|SGK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7958984375	2	491.795269	981.575986	0.21767	0.00010705	0.41627	0.00020472	0.63394	0.00031177	491.79537288056144	45.526	1.3498	45.507	44.705	46.055	-0.018581					75	31	3	0	0	0	0.89457	1	3564	3564		37.028	10.232	1	529090			29201	2118	19548	19558	33261	33261					0.08446074267988024
LKPAHPKLMA	10	Unmodified	_LKPAHPKLMA_					0	0	0			REV__ENSG00000136813|ENST00000684092|ECPAS	REV__ENSG00000136813|ENST00000684092|ECPAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.33251953125	2	553.331162	1104.64777	2.7435	0.0015181	-0.4668	-0.00025829	2.2767	0.0012598	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.86718	1	10408	10408		27.882	0	1	4237100	+		29202	19335	19549	19559	33262	33262					0.09963245630206075
LKPAHPKLMA	10	Unmodified	_LKPAHPKLMA_					0	0	0			REV__ENSG00000136813|ENST00000684092|ECPAS	REV__ENSG00000136813|ENST00000684092|ECPAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.3326416015625	2	553.331162	1104.64777	0.81959	0.00045351	1.438	0.00079572	2.2576	0.0012492	553.3317918445606	96.793	1.7474	96.956	96.403	98.15	0.16317					118	40	4	0	0	0	0.86718	1	10114	10114		27.882	2.4321	1	2701500	+		29203	19335	19549	19559	33263	33263					0.09963245630206075
LKPEILQDSRL	11	Unmodified	_LKPEILQDSRL_					0	0	0		ENSG00000151148|ENST00000342494|UBE3B;nc|ENSG00000151148|Q7Z3V4-3|UBE3B;nc|ENSG00000151148|Q7Z3V4-2|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.7386779785156	3	437.925877	1310.7558	0.33664	0.00014742	-1.8224	-0.00079807	-1.4857	-0.00065064	437.9257791889113	22.262	0.307	21.652	21.516	21.823	-0.6107					11	7	2	0	0	0	0.17648	1	878	878		21.032	0	1	36076			29204	5097	19550	19560	33264	33264					0.11285288694466544
LKPFVVYCD	9	Unmodified	_LKPFVVYCD_					0	0	0		ENSG00000108797|ENST00000264638|CNTNAP1	ENSG00000108797|ENST00000264638|CNTNAP1	ENSG00000108797|ENST00000264638|CNTNAP1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	542.2838745117188	2	542.280803	1082.54705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.294	1	44.343	43.843	44.843	0.048996								0	0	0	0.30053	1	3115	3115		30.504	0.18592	1				29205	2431	19551	19561	33265	33265					0.009081688566766388
LKPGGHGTGER	11	Unmodified	_LKPGGHGTGER_					0	0	0			REV__ENST00000462742.1_1_21:45751724-45754149:-|nuORF	REV__ENST00000462742.1_1_21:45751724-45754149:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.7947998046875	2	554.796529	1107.5785	0.9008	0.00049976	-0.81746	-0.00045352	0.08334	4.6236E-05	554.7958908144287	26.927	0.75191	26.899	26.557	27.309	-0.027706					40	18	3	0	0	0	0.60687	1	1167	1167		43.651	2.8726	1	237050	+		29206	20706	19552	19562	33266	33266					0.029018779349826218
LKPGGRSGK	9	Unmodified	_LKPGGRSGK_					0	0	0		ENST00000221859.8_1_19:36605990-36606173:-|nuORF	ENST00000221859.8_1_19:36605990-36606173:-|nuORF	ENST00000221859.8_1_19:36605990-36606173:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27471923828125	2	450.274701	898.534849	0.59861	0.00026954	-0.17405	-7.8372E-05	0.42456	0.00019117	450.27444477796837	83.377	0.92702	83.311	82.97	83.897	-0.066185					42	21	3	0	0	0	0.7932	1	8516	8516		20.947	0.95016	1	255680			29207	9174	19553	19563	33267	33267					0.08152313228515595
LKPGPSLL	8	Unmodified	_LKPGPSLL_					0	0	0		ENST00000461919.5_1_10:74113783-74113948:-|nuORF	ENST00000461919.5_1_10:74113783-74113948:-|nuORF	ENST00000461919.5_1_10:74113783-74113948:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7669982910156	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.82464	1	2835	2835		21.702	0	1	818920			29208	12033	19554	19564	33268	33268					0.09792178253815109
LKPKAKVV	8	Unmodified	_LKPKAKVV_					0	0	0		ENST00000375290.6_3_9:98215758-98232201:-|nuORF;nc|ENSG00000185920|Q13635-4|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-2|PTCH1;ENSG00000185920|ENST00000331920|PTCH1	ENST00000375290.6_3_9:98215758-98232201:-|nuORF	ENST00000375290.6_3_9:98215758-98232201:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7880859375	2	441.810388	881.606223	0.25098	0.00011089	-4.3114	-0.0019048	-4.0604	-0.0017939	441.8072861489086	37.78	0.22651	38.303	38.247	38.473	0.52235					13	5	3	0	0	0	0.4196	1	3091	3091		19.36	10.538	1	184010			29209	7757	19555	19565	33269	33269					0.16068432933172971
LKPKLGRA	8	Unmodified	_LKPKLGRA_					0	0	0			REV__ENST00000360403.6_1_1:45316663-45323405:-|nuORF	REV__ENST00000360403.6_1_1:45316663-45323405:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7879943847656	2	441.797812	881.581071	0.18581	8.2091E-05	3.4633	0.0015301	3.6492	0.0016122	441.79946236623147	39.114	0.50594	39.202	38.786	39.292	0.088375					20	13	2	0	0	0	0.4196	1	2341	2341		7.1934	0	1	109250	+		29210	25478	19556	19566	33270	33270					0.13554378130606892
LKPKLGRA	8	Unmodified	_LKPKLGRA_					0	0	0			REV__ENST00000360403.6_1_1:45316663-45323405:-|nuORF	REV__ENST00000360403.6_1_1:45316663-45323405:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	441.797812	881.581071	0.11275	4.9812E-05	9.0173	0.0039838	9.13	0.0040336	441.80100082738414	39.374	0.84563	39.344	39.157	40.002	-0.03027	0.12217	0.0013163	NaN	7.1934	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119440	+		29211	25478	19556	19566							0.13554378130606892
LKPKLGRA	8	Unmodified	_LKPKLGRA_					0	0	0			REV__ENST00000360403.6_1_1:45316663-45323405:-|nuORF	REV__ENST00000360403.6_1_1:45316663-45323405:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	441.797812	881.581071	-0.4727	-0.00020884	6.112	0.0027003	5.6393	0.0024914	441.8007584497616	39.208	0.9255	39.219	38.849	39.775	0.011173	-0.0027922	-0.0012509	NaN	7.1934	34	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114930	+		29212	25478	19556	19566							0.13554378130606892
LKPKLGRA	8	Unmodified	_LKPKLGRA_					0	0	0			REV__ENST00000360403.6_1_1:45316663-45323405:-|nuORF	REV__ENST00000360403.6_1_1:45316663-45323405:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	441.797812	881.581071	-0.071552	-3.1611E-05	5.3991	0.0023853	5.3276	0.0023537	441.799830239342	39.243	0.45329	39.19	39.077	39.53	-0.052731	-0.031412	-0.0018807	NaN	7.1934	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70141	+		29213	25478	19556	19566							0.13554378130606892
LKPKLKKEFV	10	Unmodified	_LKPKLKKEFV_					0	0	0			REV__ENSG00000184445|ENST00000333479|KNTC1	REV__ENSG00000184445|ENST00000333479|KNTC1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.4044189453125	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.366	1	50.396	49.896	50.896	0.029629								0	0	0	0.45132	1	3952	3952		25.574	0	1		+		29214	22677	19557	19567	33271	33271					0.18548576293073893
LKPKVLNPWL	10	Unmodified	_LKPKVLNPWL_					0	0	0		ENSG00000249242|ENST00000449862|TMEM150C;nc|ENSG00000249242|B9EJG8-2|TMEM150C;ENST00000488045.1_1_4:83417190-83417331:-|nuORF	ENSG00000249242|ENST00000449862|TMEM150C	ENSG00000249242|ENST00000449862|TMEM150C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3663330078125	2	604.381709	1206.74886	1.0476	0.00063313	2.7623	0.0016695	3.8098	0.0023026	604.3834676138304	104.39	0.59554	104.56	104.46	105.05	0.17096					24	14	3	0	0	0	0.37624	1	11130	11130		10.265	0	1	636230			29215	8836	19558	19568	33272	33272					0.15376020604549012
LKPLPAVAF	9	Unmodified	_LKPLPAVAF_					0	0	0		ENSG00000128731|ENST00000261609|HERC2;ENST00000437318.5_1_15:20588586-20648641:-|nuORF;ENST00000528584.5_1_15:28900509-28916776:+|nuORF;ENST00000530420.5_1_15:28900570-28916776:+|nuORF;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;nc|ENSG00000290376|Q9BVR0|HERC2P3;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF	ENSG00000128731|ENST00000261609|HERC2;ENST00000529624.5_3_15:28877823-28916776:+|nuORF	ENSG00000128731|ENST00000261609|HERC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.2887878417969	2	478.302396	954.590239	0.27437	0.00013123	-4.2656	-0.0020403	-3.9913	-0.001909	478.3002180864329	34.163	0.32972	34.468	34.324	34.653	0.30494					11	7	2	0	0	0	0.20789	1	2512	2512		19.36	4.6959	1	50994			29216	3560;13330	19559	19569	33273	33273					0.11112726696273967
LKPLPTSP	8	Unmodified	_LKPLPTSP_					0	0	0		ENST00000462849.1_1_1:1177872-1178601:-|nuORF	ENST00000462849.1_1_1:1177872-1178601:-|nuORF	ENST00000462849.1_1_1:1177872-1178601:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	427.3028869628906	2	426.763104	851.511654	-0.18281	-7.8015E-05	2.4722	0.0010551	2.2894	0.00097704	426.76449689460134	67.349	0.45284	67.366	67.159	67.612	0.016205					30	20	2	0	0	0	0.4196	1	6344	6344		24.203	0	1	47674			29217	12053	19560	19570	33274	33274					0.07995874391190227
LKPLRRKL	8	Unmodified	_LKPLRRKL_					0	0	0			REV__ENSG00000116539|ENST00000392403|ASH1L	REV__ENSG00000116539|ENST00000392403|ASH1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.250244140625	2	512.361111	1022.70767	0.33853	0.00017345	-0.10058	-5.1533E-05	0.23795	0.00012192	512.3610243879368	71.171	2.136	71.718	71.007	73.143	0.54756					91	51	2	0	0	0	0.4196	1	7918	7918		19.36	0	1	180310	+		29218	18201	19561	19571	33275	33275					0.1972230435574147
LKPPRIDSKDV	11	Unmodified	_LKPPRIDSKDV_					0	0	0		ENSG00000097096|ENST00000341460|SYDE2;ENST00000234668.6_1_1:85647735-85666124:-|nuORF;nc|ENSG00000097096|Q5VT97-2|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.87255859375	2	634.372069	1266.72959	2.1412	0.0013583	4.3375	0.0027516	6.4788	0.00411	634.3754005879202	108.96	0.67894	109.03	108.59	109.27	0.06794					83	35	3	0	0	0	0.70737	1	13239	13239		30.318	2.2362	1	824470			29219	1746	19562	19572	33276	33276					0.10689019522965282
LKPPRIDSKDV	11	Unmodified	_LKPPRIDSKDV_					0	0	0		ENSG00000097096|ENST00000341460|SYDE2;ENST00000234668.6_1_1:85647735-85666124:-|nuORF;nc|ENSG00000097096|Q5VT97-2|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.371826171875	2	634.372069	1266.72959	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.24	1	112.27	111.77	112.77	0.032707								0	0	0	0.56276	1	13612	13612		16.007	1.8697	1				29220	1746	19562	19572	33277	33277					0.10689019522965282
LKPPRIDSKDV	11	Unmodified	_LKPPRIDSKDV_					0	0	0		ENSG00000097096|ENST00000341460|SYDE2;ENST00000234668.6_1_1:85647735-85666124:-|nuORF;nc|ENSG00000097096|Q5VT97-2|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	634.372069	1266.72959	-0.010875	-6.8991E-06	8.1918	0.0051967	8.181	0.0051898	634.3771999217482	108.93	0.2242	108.93	108.78	109	0	-0.096058	0.0027711	NaN	30.318	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	755630			29221	1746	19562	19572							0.10689019522965282
LKPPRIDSKDV	11	Unmodified	_LKPPRIDSKDV_					0	0	0		ENSG00000097096|ENST00000341460|SYDE2;ENST00000234668.6_1_1:85647735-85666124:-|nuORF;nc|ENSG00000097096|Q5VT97-2|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	634.372069	1266.72959	-0.13958	-8.8548E-05	7.2393	0.0045924	7.0997	0.0045039	634.3760864625467	109.06	0.20622	109.01	108.88	109.08	-0.049332	-0.016757	0.0015626	NaN	30.318	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	498970			29222	1746	19562	19572							0.10689019522965282
LKPPRIDSKDV	11	Unmodified	_LKPPRIDSKDV_					0	0	0		ENSG00000097096|ENST00000341460|SYDE2;ENST00000234668.6_1_1:85647735-85666124:-|nuORF;nc|ENSG00000097096|Q5VT97-2|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	634.372069	1266.72959	1.489	0.00094458	6.2596	0.0039709	7.7486	0.0049155	634.3760425644845	108.96	0.61542	109.09	108.65	109.26	0.13026	0.057312	0.00031966	NaN	30.318	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1243900			29223	1746	19562	19572							0.10689019522965282
LKPPRIDSKDV	11	Unmodified	_LKPPRIDSKDV_					0	0	0		ENSG00000097096|ENST00000341460|SYDE2;ENST00000234668.6_1_1:85647735-85666124:-|nuORF;nc|ENSG00000097096|Q5VT97-2|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	634.372069	1266.72959	0.93363	0.00059227	6.7645	0.0042912	7.6981	0.0048835	634.3760692366511	108.97	0.43446	109.05	108.81	109.24	0.078552	0.02061	0.0009602	NaN	30.318	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1186900			29224	1746	19562	19572							0.10689019522965282
LKPPRIDSKDV	11	Unmodified	_LKPPRIDSKDV_					0	0	0		ENSG00000097096|ENST00000341460|SYDE2;ENST00000234668.6_1_1:85647735-85666124:-|nuORF;nc|ENSG00000097096|Q5VT97-2|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	634.372069	1266.72959	-1.1775	-0.00074697	9.3205	0.0059127	8.143	0.0051657	634.3777425065913	108.99	0.42496	109.01	108.77	109.19	0.020561	-0.021912	0.0042032	NaN	30.318	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1123500			29225	1746	19562	19572							0.10689019522965282
LKPPRIDSKDV	11	Unmodified	_LKPPRIDSKDV_					0	0	0		ENSG00000097096|ENST00000341460|SYDE2;ENST00000234668.6_1_1:85647735-85666124:-|nuORF;nc|ENSG00000097096|Q5VT97-2|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	634.372069	1266.72959	6.3182	0.0040081	1.2546	0.00079587	7.5728	0.004804	634.3730570472351	109	0.36767	109.09	108.91	109.28	0.090057	0.059277	-0.0060305	NaN	30.318	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	639580			29226	1746	19562	19572							0.10689019522965282
LKPPWSNF	8	Unmodified	_LKPPWSNF_					0	0	0		ENSG00000179542|ENST00000356928|SLITRK4	ENSG00000179542|ENST00000356928|SLITRK4	ENSG00000179542|ENST00000356928|SLITRK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.76751708984375	2	494.766178	987.517802	1.0023	0.00049592	2.3215	0.0011486	3.3239	0.0016445	494.7672897530766	36.426	1.4404	36.866	36.615	38.056	0.44043					65	34	2	0	0	0	0.89494	1	2896	2896		37.159	3.6435	1	588210			29227	7277	19563	19573	33278	33278					0.023543926227148404
LKPQKKGKTSP	11	Unmodified	_LKPQKKGKTSP_					0	0	0		ENSG00000188306|ENST00000340806|LRRIQ4	ENSG00000188306|ENST00000340806|LRRIQ4	ENSG00000188306|ENST00000340806|LRRIQ4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.58819580078125	3	404.587195	1210.73976	0.18961	7.6715E-05	3.9321	0.0015909	4.1218	0.0016676	404.5886662890934	41.346	1.1707	41.315	40.657	41.828	-0.030991					72	31	3	0	0	0	0.71803	1	3040	3040		28.577	6.0151	1	279590			29228	7920	19564	19574	33279	33279					0.14281627248237783
LKPRKSSLSHI	11	Unmodified	_LKPRKSSLSHI_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2275695800781	3	422.594461	1264.76155	-1.7973	-0.00075951	-2.6617	-0.0011248	-4.459	-0.0018843	422.5932456599894	63.332	0.75298	63.446	63.003	63.756	0.11389					45	37	2	0	0	0	0.17521	1	5574	5574		17.167	7.0628	1	79134			29229	7038	19565	19575	33280	33280					0.13976431996798055
LKPRKSSLSHI	11	Unmodified	_LKPRKSSLSHI_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2275695800781	3	422.594461	1264.76155	-1.7962	-0.00075905	-2.6108	-0.0011033	-4.407	-0.0018624	422.59327934266173	63.84	0.89128	63.96	63.552	64.444	0.12004					55	40	2	0	0	0	0.17521	1	5574	5574		17.167	7.0628	1	99925			29230	7038	19565	19575	33281	33281					0.13976431996798055
LKPRKSSLSHI	11	Unmodified	_LKPRKSSLSHI_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	422.594461	1264.76155	-0.99676	-0.00042123	-3.8989	-0.0016476	-4.8956	-0.0020689	422.59269157718677	63.326	0.21958	63.349	63.165	63.384	0.022984	-0.1351	0.00067601	NaN	17.167	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51731			29231	7038	19565	19575							0.13976431996798055
LKPRRTLTLT	10	Unmodified	_LKPRRTLTLT_					0	0	0			REV__ENSG00000066056|ENST00000372476|TIE1	REV__ENSG00000066056|ENST00000372476|TIE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2301025390625	3	400.25919	1197.75574	-1.8735	-0.0007499	4.0172	0.0016079	2.1437	0.00085802	400.26074257193613	41.915	0.82444	42.549	42.244	43.068	0.6339					27	20	2	0	0	0	0.37624	1	3748	3748		9.6461	0	1	398580	+		29232	16515	19566	19576	33282	33282					0.16477333485136114
LKPVLGVLRVR	11	Unmodified	_LKPVLGVLRVR_					0	0	0		ENSG00000182179|ENST00000333486|UBA7;ENST00000483751.5_1_3:49846965-49847449:-|nuORF	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.4302368164062	2	625.426982	1248.83941	5.9501	0.0037213	1.3068	0.0008173	7.2568	0.0045386	625.4276426088085	108.91	0.50605	109	108.73	109.24	0.090057					40	22	2	0	0	0	0.78309	1	13264	13264		14.865	0	1	1418100			29233	7432	19567	19577	33283	33283					0.22494489652831362
LKPVLGVLRVR	11	Unmodified	_LKPVLGVLRVR_					0	0	0		ENSG00000182179|ENST00000333486|UBA7;ENST00000483751.5_1_3:49846965-49847449:-|nuORF	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	625.426982	1248.83941	-0.058286	-3.6454E-05	7.5082	0.0046959	7.45	0.0046594	625.4315336455486	108.63	0.3003	108.63	108.51	108.81	0	-0.22789	0.0029272	NaN	14.865	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	551120			29234	7432	19567	19577							0.22494489652831362
LKPVLGVLRVR	11	Unmodified	_LKPVLGVLRVR_					0	0	0		ENSG00000182179|ENST00000333486|UBA7;ENST00000483751.5_1_3:49846965-49847449:-|nuORF	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	625.426982	1248.83941	2.9227	0.0018279	4.6509	0.0029088	7.5736	0.0047367	625.429727159543	108.86	0.68909	108.83	108.52	109.21	-0.029381	-0.033165	-0.00064693	NaN	14.865	65	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3045400			29235	7432	19567	19577							0.22494489652831362
LKPVLLTD	8	Unmodified	_LKPVLLTD_					0	0	0			REV__nc|ENSG00000174485|Q7Z401|DENND4A	REV__nc|ENSG00000174485|Q7Z401|DENND4A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2717590332031	2	449.784036	897.553519	-1.2463	-0.00056055	-1.7518	-0.00078795	-2.9981	-0.0013485	449.7832021321231	102.08	0.87901	102.27	101.97	102.85	0.19484					40	21	2	0	0	0	0.4196	1	10720	10720		7.6903	0	1	204070	+		29236	21997	19568	19578	33284	33284					0.10064430079705744
LKQAAPAI	8	Unmodified	_LKQAAPAI_					0	0	0		nc|ENSG00000196811|P07510-2|CHRNG;ENSG00000196811|ENST00000651502|CHRNG	nc|ENSG00000196811|P07510-2|CHRNG	nc|ENSG00000196811|P07510-2|CHRNG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.25653076171875	2	406.255446	810.496338	0.36148	0.00014685	3.5102	0.001426	3.8717	0.0015729	406.2567806914951	58.897	2.068	59.011	58.646	60.714	0.11396					119	73	2	0	0	0	0.81548	1	5235	5235		20.482	0	1	186070			29237	8104	19569	19579	33285	33285					0.08351007593978466
LKQAPVLVLSL	11	Unmodified	_LKQAPVLVLSL_					0	0	0			REV__nc|ENSG00000163814|Q9H5V8-2|CDCP1	REV__nc|ENSG00000163814|Q9H5V8-2|CDCP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8665771484375	2	590.886824	1179.7591	3.3782	0.0019962	2.8468	0.0016821	6.2251	0.0036783	590.8904779578664	103.51	0.55651	103.47	103.25	103.8	-0.043755					24	13	3	0	0	0	0.17431	1	11312	11312		24.519	0	1	310390	+		29238	20977	19570	19580	33286	33286					0.17640583539127874
LKQAPVLVLSL	11	Unmodified	_LKQAPVLVLSL_					0	0	0			REV__nc|ENSG00000163814|Q9H5V8-2|CDCP1	REV__nc|ENSG00000163814|Q9H5V8-2|CDCP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8662719726562	2	590.886824	1179.7591	0.84609	0.00049994	2.432	0.001437	3.2781	0.001937	590.8869731686548	103.33	0.67818	103.51	103.43	104.11	0.18298					25	16	2	0	0	0	0.17226	1	10998	10998		35.152	2.3396	1	324540	+		29239	20977	19570	19580	33287	33287					0.17640583539127874
LKQAPVLVLSL	11	Unmodified	_LKQAPVLVLSL_					0	0	0			REV__nc|ENSG00000163814|Q9H5V8-2|CDCP1	REV__nc|ENSG00000163814|Q9H5V8-2|CDCP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8662719726562	2	590.886824	1179.7591	0.89124	0.00052662	1.7529	0.0010358	2.6442	0.0015624	590.8877152306588	103.37	0.81712	103.5	103.13	103.95	0.12622					31	20	3	0	0	0	0.17226	1	10919	10919		28.081	0	1	866080	+		29240	20977	19570	19580	33288	33288					0.17640583539127874
LKQCKFSLKTT	11	Unmodified	_LKQCKFSLKTT_					0	0	0			REV__ENSG00000173890|ENST00000355897|GPR160	REV__ENSG00000173890|ENST00000355897|GPR160	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.8723754882812	2	648.870848	1295.72714	1.8785	0.0012189	-0.091752	-5.9535E-05	1.7868	0.0011594	648.8707456112022	99.351	2.3226	99.398	98.454	100.78	0.047523					131	53	3	0	0	0	0.66929	1	10700	10700		36.447	2.2742	1	270500	+		29241	21959	19571	19581	33289	33289					0.0911084779365865
LKQGQYSPMA	10	Oxidation (M)	_LKQGQYSPM(Oxidation (M))A_		LKQGQYSPM(1)A		LKQGQYSPM(48)A	0	0	1		nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A;ENSG00000152234|ENST00000398752|ATP5F1A	nc|ENSG00000152234|P25705-2|ATP5F1A	nc|ENSG00000152234|P25705-2|ATP5F1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.78173828125	2	569.781699	1137.54884	-0.89736	-0.0005113	1.0385	0.0005917	0.14111	8.0402E-05	569.7821553784117	31.806	0.57995	31.819	31.534	32.114	0.013058					30	13	3	0	0	0	0.64457	1	1748	1748		47.657	6.8792	1	132950			29242	5164	19572	19582	33290	33290		90			-0.014428221253865559
LKQGQYSPMA	10	Oxidation (M)	_LKQGQYSPM(Oxidation (M))A_		LKQGQYSPM(1)A		LKQGQYSPM(62)A	0	0	1		nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A;ENSG00000152234|ENST00000398752|ATP5F1A	nc|ENSG00000152234|P25705-2|ATP5F1A	nc|ENSG00000152234|P25705-2|ATP5F1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.78125	2	569.781699	1137.54884	-0.16859	-9.6059E-05	0.50052	0.00028519	0.33193	0.00018913	569.7818844263716	31.963	0.80886	31.912	31.472	32.281	-0.051031					40	17	3	0	0	0	0.42393	1	1838	1838		62.107	16.135	1	136230			29243	5164	19572	19582	33291	33291		90			-0.014428221253865559
LKQGQYSPMA	10	Oxidation (M)	_LKQGQYSPM(Oxidation (M))A_		LKQGQYSPM(1)A		LKQGQYSPM(58)A	0	0	1		nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A;ENSG00000152234|ENST00000398752|ATP5F1A	nc|ENSG00000152234|P25705-2|ATP5F1A	nc|ENSG00000152234|P25705-2|ATP5F1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.7806396484375	2	569.781699	1137.54884	0.67965	0.00038725	-0.75731	-0.0004315	-0.077666	-4.4253E-05	569.7811422523122	31.835	0.74542	31.829	31.385	32.131	-0.0061455					35	16	3	0	0	0	0.47091	1	1763	1763		58.23	8.7884	1	146780			29244	5164	19572	19582	33292	33292		90			-0.014428221253865559
LKQIRLRILP	10	Unmodified	_LKQIRLRILP_					0	0	0		ENSG00000168538|ENST00000334690|TRAPPC11	ENSG00000168538|ENST00000334690|TRAPPC11	ENSG00000168538|ENST00000334690|TRAPPC11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.4297485351562	2	625.426982	1248.83941	5.9501	0.0037213	1.3068	0.0008173	7.2568	0.0045386	625.4276426088085	108.91	0.50605	109	108.73	109.24	0.090057					40	22	2	0	0	0	0.91876	1	13272	13272		6.3127	0.39155	1	1418100			29245	6409	19573	19583	33293	33293					0.22494489652808625
LKQITPTIE	9	Unmodified	_LKQITPTIE_					0	0	0			REV__nc|ENSG00000136824|O95347-2|SMC2	REV__nc|ENSG00000136824|O95347-2|SMC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.8121337890625	2	521.810782	1041.60701	-0.55479	-0.00028949	2.2037	0.0011499	1.6489	0.00086042	521.811595039529	30.649	0.70826	30.678	30.362	31.07	0.028618					39	15	3	0	0	0	0.69624	1	2020	2020		40.778	0	1	310940	+		29246	19337	19574	19584	33294	33294					0.0878718279154782
LKQKIIENERL	11	Unmodified	_LKQKIIENERL_					0	0	0			REV__nc|ENSG00000090889|O95239-2|KIF4A	REV__nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	461.9483947753906	3	461.948793	1382.82455	0.61011	0.00028184	-1.6448	-0.00075983	-1.0347	-0.00047799	461.9479226020284	107.88	0.49751	107.91	107.47	107.97	0.035622					42	11	6	0	0	0	0.74022	1	11837	11837		24.232	4.2013	1	68204000	+		29247	29725	19575	19585	33295	33295					0.14844952994167215
LKQKKRLLIL	10	Unmodified	_LKQKKRLLIL_					0	0	0			REV__ENST00000489408.1_1_3:32023272-32027845:+|nuORF	REV__ENST00000489408.1_1_3:32023272-32027845:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.2984313964844	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.533	1	66.533	66.033	67.033	0								0	0	0	0.45132	1	5864	5864		7.3997	1.7009	1		+		29248	27618	19576	19586	33296	33296					0.2595994682969831
LKQLIEKRIGK	11	Unmodified	_LKQLIEKRIGK_					0	0	0		ENSG00000138768|ENST00000514213|USO1;nc|ENSG00000138768|O60763-2|USO1	ENSG00000138768|ENST00000514213|USO1	ENSG00000138768|ENST00000514213|USO1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.6306457519531	3	442.625761	1324.85546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.51	1	116.54	116.04	117.04	0.026466								0	0	0	0.56276	1	12802	12802		22.562	0.78116	1				29249	4329	19577	19587	33297	33297					0.2060215109904675
LKQLKKLHIN	10	Unmodified	_LKQLKKLHIN_					0	0	0		ENSG00000139329|ENST00000266718|LUM;CON__Q05443	ENSG00000139329|ENST00000266718|LUM	ENSG00000139329|ENST00000266718|LUM	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.26800537109375	3	412.271319	1233.79213	0.072683	2.9965E-05	3.601	0.0014846	3.6737	0.0015146	412.27251718230633	46.344	1.9999	46.33	45.665	47.665	-0.013821					106	53	4	0	0	0	0.37624	1	3867	3867		6.001	0	1	702240			29250	4363	19578	19588	33298	33298					0.18458210381845674
LKQLKRTHK	9	Unmodified	_LKQLKRTHK_					0	0	0		nc|ENSG00000068878|Q14997-3|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;ENSG00000068878|ENST00000404125|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	576.3692016601562	2	576.372207	1150.72986	-1.0129	-0.00058382	-4.0525	-0.0023357	-5.0654	-0.0029195	576.3696920103074	39.568	1.8943	39.522	38.692	40.586	-0.046341					125	44	4	0	0	0	0.7932	1	2811	2811		20.947	3.582	1	471610			29251	1210	19579	19589	33299	33299					0.1605248403348014
LKQLKRTHK	9	Unmodified	_LKQLKRTHK_					0	0	0		nc|ENSG00000068878|Q14997-3|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;ENSG00000068878|ENST00000404125|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.3690795898438	2	576.372207	1150.72986	-1.4088	-0.00081197	-3.6894	-0.0021265	-5.0981	-0.0029384	576.3698886134715	39.563	1.8586	39.572	38.671	40.529	0.0092773					122	43	4	0	0	0	0.73802	2	2807	2767;2807		37.812	7.3079	1	476520			29252	1210	19579	19589	33300;33301	33301					0.1605248403348014
LKQLKRTHK	9	Unmodified	_LKQLKRTHK_					0	0	0		nc|ENSG00000068878|Q14997-3|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;ENSG00000068878|ENST00000404125|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3698120117188	2	576.372207	1150.72986	-0.74313	-0.00042832	-4.0021	-0.0023067	-4.7452	-0.002735	576.3696767962949	37.867	1.5412	38.18	37.746	39.287	0.31312					100	38	4	0	0	0	0.77244	1	3082	3082		32.812	1.2826	1	2629900			29253	1210	19579	19589	33302	33302					0.1605248403348014
LKQLKRTHK	9	Unmodified	_LKQLKRTHK_					0	0	0		nc|ENSG00000068878|Q14997-3|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;ENSG00000068878|ENST00000404125|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.8720703125	2	576.372207	1150.72986	-2.801	-0.0016144	-3.7467	-0.0021595	-6.5478	-0.0037739	576.3698140239752	41.565	1.4549	41.979	41.329	42.784	0.4139					91	38	3	0	0	0	0.71772	1	3629	3629		39.253	14.734	1	1909200			29254	1210	19579	19589	33303	33303					0.1605248403348014
LKQLKRTHK	9	Unmodified	_LKQLKRTHK_					0	0	0		nc|ENSG00000068878|Q14997-3|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;ENSG00000068878|ENST00000404125|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	576.372207	1150.72986	-1.2448	-0.00071748	-3.8667	-0.0022287	-5.1116	-0.0029462	576.3698638810407	39.417	1.636	39.417	38.642	40.278	0	-0.1043	0.00068333	NaN	37.812	99	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	309900			29255	1210	19579	19589							0.1605248403348014
LKQLKRTHK	9	Unmodified	_LKQLKRTHK_					0	0	0		nc|ENSG00000068878|Q14997-3|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;ENSG00000068878|ENST00000404125|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	576.372207	1150.72986	0.32368	0.00018656	-5.3096	-0.0030603	-4.986	-0.0028738	576.3689394796284	39.166	1.3523	39.254	38.851	40.203	0.088375	-0.2674	-0.00097998	NaN	37.812	84	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	198310			29256	1210	19579	19589							0.1605248403348014
LKQLKRTHK	9	Unmodified	_LKQLKRTHK_					0	0	0		nc|ENSG00000068878|Q14997-3|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;ENSG00000068878|ENST00000404125|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	nc|ENSG00000068878|Q14997-3|PSME4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	576.372207	1150.72986	-1.6861	-0.0009718	-2.5375	-0.0014625	-4.2235	-0.0024343	576.87235716542	39.302	0.3511	39.856	39.615	39.966	0.55449	0.33446	0.0022156	NaN	37.812	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55370			29257	1210	19579	19589							0.1605248403348014
LKQLLSFLSI	10	Unmodified	_LKQLLSFLSI_					0	0	0		ENSG00000083093|ENST00000261584|PALB2	ENSG00000083093|ENST00000261584|PALB2	ENSG00000083093|ENST00000261584|PALB2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3538818359375	2	581.365724	1160.7169	-0.86863	-0.00050499	-1.6566	-0.00096307	-2.5252	-0.0014681	581.3649614717931	104.86	0.45169	104.84	104.74	105.2	-0.014809					15	10	2	0	0	0	0.37624	1	11339	11339		26.693	0	1	74061			29258	1495	19580	19590	33304	33304					0.14296608130757704
LKQLRELDKQL	11	Unmodified	_LKQLRELDKQL_					0	0	0		ENSG00000188716|ENST00000338487|DUSP29	ENSG00000188716|ENST00000338487|DUSP29	ENSG00000188716|ENST00000338487|DUSP29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	461.9484558105469	3	461.948793	1382.82455	-0.12302	-5.6829E-05	-1.7838	-0.00082403	-1.9068	-0.00088086	461.94790196842024	107.88	0.31844	107.84	107.61	107.93	-0.042404					23	7	4	0	0	0	0.76087	1	11758	11758		19.627	0.36425	1	83343000			29259	7950	19581	19591	33305	33305					0.14844952994167215
LKQLRELDKQL	11	Unmodified	_LKQLRELDKQL_					0	0	0		ENSG00000188716|ENST00000338487|DUSP29	ENSG00000188716|ENST00000338487|DUSP29	ENSG00000188716|ENST00000338487|DUSP29	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.9484558105469	3	461.948793	1382.82455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.46	1	107.6	107.1	108.1	0.13866								0	0	0	0.56276	1	11544	11544		21.78	1.75	1				29260	7950	19581	19591	33306	33306					0.14844952994167215
LKQLRVLQLM	10	Unmodified	_LKQLRVLQLM_					0	0	0		ENST00000456008.2_1_10:98917340-98945578:-|nuORF;nc|ENSG00000187122|O75093-2|SLIT1;ENSG00000187122|ENST00000266058|SLIT1	ENST00000456008.2_1_10:98917340-98945578:-|nuORF	ENST00000456008.2_1_10:98917340-98945578:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3934326171875	2	621.391751	1240.76895	0.92125	0.00057246	1.5616	0.00097038	2.4829	0.0015428	621.3925512557826	106.19	2.0795	106.29	105.91	107.99	0.099007					149	50	5	0	0	0	0.86589	1	11423	11423		29.15	4.6304	1	2148500			29261	7842	19582	19592	33307	33307					0.15819448272850423
LKQMVGGF	8	Unmodified	_LKQMVGGF_					0	0	0		ENSG00000075673|ENST00000381946|ATP12A;nc|ENSG00000075673|P54707-2|ATP12A	ENSG00000075673|ENST00000381946|ATP12A	ENSG00000075673|ENST00000381946|ATP12A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.2523193359375	2	440.241481	878.468409	1.4321	0.00063049	-3.7695	-0.0016595	-2.3373	-0.001029	440.2396982411154	90.926	1.0113	90.859	90.264	91.276	-0.067085					41	24	2	0	0	0	0.4196	1	9542	9542		18.324	8.0592	1	346200			29262	1340	19583	19593	33308	33308					0.02431361342269156
LKQRQVRPSHA	11	Unmodified	_LKQRQVRPSHA_					0	0	0		ENST00000467673.5_1_1:39571193-39720158:+|nuORF	ENST00000467673.5_1_1:39571193-39720158:+|nuORF	ENST00000467673.5_1_1:39571193-39720158:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.5943603515625	3	440.593343	1318.7582	2.645	0.0011654	0.40162	0.00017695	3.0466	0.0013423	440.59346733501565	25.299	1.8691	24.868	24.408	26.278	-0.4311					104	42	6	0	0	0	0.71207	1	1336	1336		29.551	0	1	1166500			29263	12162	19584	19594	33309	33309					0.11157181942803618
LKQVAYFRARL	11	Unmodified	_LKQVAYFRARL_					0	0	0			REV__nc|ENSG00000132305|Q16891-2|IMMT	REV__nc|ENSG00000132305|Q16891-2|IMMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.609375	3	455.610223	1363.80884	-0.88204	-0.00040187	-3.1018	-0.0014132	-3.9838	-0.0018151	455.6087169982617	69.938	2.9068	70.322	69.842	72.749	0.38416					146	73	3	0	0	0	0.71207	1	7701	7701		29.551	5.3189	1	869170	+		29264	18991	19585	19595	33310	33310					0.14148711267785075
LKQWVQLVIL	10	Unmodified	_LKQWVQLVIL_					0	0	0		nc|ENSG00000115970|Q6YHU6-4|THADA;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;ENSG00000115970|ENST00000405975|THADA	nc|ENSG00000115970|Q6YHU6-4|THADA	nc|ENSG00000115970|Q6YHU6-4|THADA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9333801269531	3	413.932303	1238.77508	1.6433	0.00068023	-1.0746	-0.0004448	0.56875	0.00023543	413.9318142026393	43.114	2.2589	43.114	42.157	44.416	0.00016785					149	54	3	0	0	0	0.86551	1	3270	3270		14.694	1.1857	1	500010			29265	2888	19586	19596	33311	33311					0.16524289776043588
LKQYYLRVSL	10	Unmodified	_LKQYYLRVSL_					0	0	0		ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8820190429688	2	641.87953	1281.74451	2.2004	0.0014124	2.3254	0.0014926	4.5258	0.002905	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.70553	1	10607	10607		44.377	7.9304	1	3624200			29266	11581	19587	19597	33312	33312					0.11490511390979918
LKQYYLRVSL	10	Unmodified	_LKQYYLRVSL_					0	0	0		ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8819580078125	2	641.87953	1281.74451	1.6835	0.0010806	2.8926	0.0018567	4.5761	0.0029373	641.8812254430574	95.773	2.4493	95.82	94.333	96.782	0.046989					202	57	5	0	0	0	0.67571	2	10189	10189;10238		45.972	6.129	1	1550900			29267	11581	19587	19597	33313;33314	33313					0.11490511390979918
LKQYYLRVSL	10	Unmodified	_LKQYYLRVSL_					0	0	0		ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8818969726562	2	641.87953	1281.74451	1.6823	0.0010798	2.8836	0.0018509	4.5658	0.0029307	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.8651	1	10279	10279		25.574	2.0514	1	3772700			29268	11581	19587	19597	33315	33315					0.11490511390979918
LKQYYLRVSL	10	Unmodified	_LKQYYLRVSL_					0	0	0		ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8821411132812	2	641.87953	1281.74451	1.5937	0.0010229	2.8364	0.0018207	4.4301	0.0028436	641.8811997248309	95.576	2.5829	95.807	94.242	96.825	0.23103					208	61	4	0	0	0	0.86348	1	9882	9882		31.53	1.2121	1	2238900			29269	11581	19587	19597	33316	33316					0.11490511390979918
LKQYYLRVSL	10	Unmodified	_LKQYYLRVSL_					0	0	0		ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.882568359375	2	641.87953	1281.74451	1.5974	0.0010254	2.9074	0.0018662	4.5048	0.0028915	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.8608	1	10211	10211		34.173	2.6427	1	4266200			29270	11581	19587	19597	33317	33317					0.11490511390979918
LKQYYLRVSL	10	Unmodified	_LKQYYLRVSL_					0	0	0		ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8818359375	2	641.87953	1281.74451	0.89498	0.00057447	3.5588	0.0022843	4.4538	0.0028588	641.8816647321656	95.707	2.6304	95.87	94.248	96.878	0.16316					218	62	4	0	0	0	0.54701	1	9778	9778		52.937	10.072	1	2156900			29271	11581	19587	19597	33318	33318					0.11490511390979918
LKQYYLRVSL	10	Unmodified	_LKQYYLRVSL_					0	0	0		ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8825073242188	2	641.87953	1281.74451	1.4722	0.00094496	3.0644	0.001967	4.5366	0.002912	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.54701	2	11755	11755;11789		52.937	16.49	1	4511200			29272	11581	19587	19597	33319;33320	33319					0.11490511390979918
LKQYYLRVSL	10	Unmodified	_LKQYYLRVSL_					0	0	0		ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	ENST00000427628.5_1_12:46123676-46149750:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.88232421875	2	641.87953	1281.74451	2.6248	0.0016848	1.9473	0.0012499	4.5721	0.0029347	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.70553	1	11716	11716		44.377	7.9304	1	4455800			29273	11581	19587	19597	33321	33321					0.11490511390979918
LKRAGIVI	8	Unmodified	_LKRAGIVI_					0	0	0			REV__nc|ENSG00000114544|Q96GZ6-6|SLC41A3	REV__nc|ENSG00000114544|Q96GZ6-6|SLC41A3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3003234863281	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.83058	1	6577	6577		12.959	0	1	1072400	+		29274	18054	19588	19598	33322	33322					0.14627262273359065
LKRAPPGK	8	Unmodified	_LKRAPPGK_					0	0	0			REV__ENSG00000182601|ENST00000331351|HS3ST4	REV__ENSG00000182601|ENST00000331351|HS3ST4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78033447265625	2	433.782162	865.549771	-0.061692	-2.6761E-05	-3.8926	-0.0016885	-3.9543	-0.0017153	433.7812422800909	50.666	4.3921	50.664	50.068	54.46	-0.0020447					254	121	5	0	0	0	0.4196	1	4740	4740		12.207	5.0135	1	2518200	+		29275	22533	19589	19599	33323	33323					0.11161805096503485
LKRAPPGK	8	Unmodified	_LKRAPPGK_					0	0	0			REV__ENSG00000182601|ENST00000331351|HS3ST4	REV__ENSG00000182601|ENST00000331351|HS3ST4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	433.782162	865.549771	-0.75019	-0.00032542	-3.014	-0.0013074	-3.7642	-0.0016328	433.78150846795467	50.955	4.3627	50.932	50.252	54.615	-0.02343	0.034385	0.00058543	NaN	12.207	450	115	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2970900	+		29276	22533	19589	19599							0.11161805096503485
LKRAPPGK	8	Unmodified	_LKRAPPGK_					0	0	0			REV__ENSG00000182601|ENST00000331351|HS3ST4	REV__ENSG00000182601|ENST00000331351|HS3ST4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	433.782162	865.549771	1.3842	0.00060043	-5.4181	-0.0023503	-4.034	-0.0017499	433.7805798804285	51.022	4.7508	51.03	50.345	55.095	0.0077477	0.13246	-0.0015003	NaN	12.207	378	133	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2444100	+		29277	22533	19589	19599							0.11161805096503485
LKRAPPGK	8	Unmodified	_LKRAPPGK_					0	0	0			REV__ENSG00000182601|ENST00000331351|HS3ST4	REV__ENSG00000182601|ENST00000331351|HS3ST4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	433.782162	865.549771	1.0763	0.00046687	-3.4568	-0.0014995	-2.3805	-0.0010326	433.78075123212227	50.174	0.90005	51.019	50.395	51.295	0.84501	0.12176	0.00020131	NaN	12.207	37	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	205300	+		29278	22533	19589	19599							0.11161805096503485
LKRDPLQDI	9	Unmodified	_LKRDPLQDI_					0	0	0		ENSG00000165434|ENST00000298198|PGM2L1	ENSG00000165434|ENST00000298198|PGM2L1	ENSG00000165434|ENST00000298198|PGM2L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.3174438476562	2	549.319306	1096.62406	1.2725	0.00069901	-4.2602	-0.0023402	-2.9877	-0.0016412	549.3168832768056	100.86	2.4507	100.91	100.43	102.88	0.046356					139	58	4	0	0	0	0.7932	1	10853	10853		20.947	0.95016	1	1880500			29279	6081	19590	19600	33324	33324					0.0796110339738334
LKRFFEVRRVV	11	Unmodified	_LKRFFEVRRVV_					0	0	0		ENST00000543425.1_1_12:124075023-124081273:+|nuORF;ENSG00000086598|ENST00000262225|TMED2	ENST00000543425.1_1_12:124075023-124081273:+|nuORF	ENST00000543425.1_1_12:124075023-124081273:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.6460266113281	3	483.633139	1447.87759	-0.35856	-0.00017341	-4.3611	-0.0021092	-4.7196	-0.0022826	483.63099934544107	44.4	0.55938	44.85	44.732	45.292	0.45025					18	13	2	0	0	0	0.17882	1	4069	4069		21.032	12.233	1	264000			29280	1558	19591	19601	33325	33325					0.17156375567469695
LKRFKTKMA	9	Unmodified	_LKRFKTKMA_					0	0	0		nc|ENSG00000100888|Q9HCK8-2|CHD8;ENSG00000100888|ENST00000646647|CHD8	nc|ENSG00000100888|Q9HCK8-2|CHD8	nc|ENSG00000100888|Q9HCK8-2|CHD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	561.8456420898438	2	561.844436	1121.67432	0.82777	0.00046508	1.4318	0.00080447	2.2596	0.0012695	561.8450907704936	96.8	1.7474	96.963	96.403	98.15	0.16317					98	40	4	0	0	0	0.7932	1	9953	9953		23.042	3.0457	1	906900			29281	1879	19592	19602	33326	33326					0.11834934521539253
LKRFKTKMA	9	Unmodified	_LKRFKTKMA_					0	0	0		nc|ENSG00000100888|Q9HCK8-2|CHD8;ENSG00000100888|ENST00000646647|CHD8	nc|ENSG00000100888|Q9HCK8-2|CHD8	nc|ENSG00000100888|Q9HCK8-2|CHD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.8460693359375	2	561.844436	1121.67432	1.9082	0.0010721	0.54984	0.00030892	2.458	0.001381	561.8445473616424	96.586	1.6942	96.991	96.505	98.199	0.40498					103	40	4	0	0	0	0.76255	1	11584	11584		35.618	5.1146	1	1276200			29282	1879	19592	19602	33327	33327					0.11834934521539253
LKRGANPN	8	Unmodified	_LKRGANPN_					0	0	0		nc|ENSG00000230453|A2A2Z9|ANKRD18B;chr9:33541227-33543182|32|16.91|0.48|5.14|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33528841-33529000|31|33.26|0.67|5.62|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33524695-33528727|25|25.92|0.53|5.6|+|ENST00000290943|ANKRD18B,ANKRD18B;ENSG00000230453|ENST00000684830|ANKRD18B	nc|ENSG00000230453|A2A2Z9|ANKRD18B	nc|ENSG00000230453|A2A2Z9|ANKRD18B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2510681152344	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.87922	1	7660	7660		31.955	1.4512	1	3292300			29283	530	19593	19603	33328	33328					0.048394536773685104
LKRGANPN	8	Unmodified	_LKRGANPN_					0	0	0		nc|ENSG00000230453|A2A2Z9|ANKRD18B;chr9:33541227-33543182|32|16.91|0.48|5.14|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33528841-33529000|31|33.26|0.67|5.62|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33524695-33528727|25|25.92|0.53|5.6|+|ENST00000290943|ANKRD18B,ANKRD18B;ENSG00000230453|ENST00000684830|ANKRD18B	nc|ENSG00000230453|A2A2Z9|ANKRD18B	nc|ENSG00000230453|A2A2Z9|ANKRD18B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2511901855469	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.87922	1	7213	7213		31.955	1.4512	1	712390			29284	530	19593	19603	33329	33329					0.048394536773685104
LKRGANPNI	9	Unmodified	_LKRGANPNI_					0	0	0		nc|ENSG00000230453|A2A2Z9|ANKRD18B;chr9:33541227-33543182|32|16.91|0.48|5.14|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33528841-33529000|31|33.26|0.67|5.62|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33524695-33528727|25|25.92|0.53|5.6|+|ENST00000290943|ANKRD18B,ANKRD18B;ENSG00000230453|ENST00000684830|ANKRD18B	nc|ENSG00000230453|A2A2Z9|ANKRD18B	nc|ENSG00000230453|A2A2Z9|ANKRD18B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79486083984375	2	491.793258	981.571963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.243	1	62.233	61.733	62.733	-0.0094147								0	0	0	0.28386	1	5779	5779		37.159	0	1				29285	530	19594	19604	33330	33330					0.08043984774269575
LKRGKPAP	8	Unmodified	_LKRGKPAP_					0	0	0			REV__ENST00000427177.5_1_17:75495131-75495422:+|nuORF	REV__ENST00000427177.5_1_17:75495131-75495422:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7800598144531	2	433.782162	865.549771	0.28843	0.00012512	-3.8544	-0.001672	-3.566	-0.0015469	433.78110763255734	50.946	4.0891	50.995	50.343	54.432	0.049896					422	122	5	0	0	0	0.80706	1	4337	4337		19.36	1.0356	1	4871400	+		29286	26556	19595	19605	33331	33331					0.11161805096492117
LKRHFKLYL	9	Unmodified	_LKRHFKLYL_					0	0	0		ENSG00000151694|ENST00000310823|ADAM17;nc|ENSG00000151694|P78536-2|ADAM17;ENST00000478059.1_1_2:9667906-9695734:-|nuORF	ENSG00000151694|ENST00000310823|ADAM17	ENSG00000151694|ENST00000310823|ADAM17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.5874938964844	3	406.588759	1216.74445	-0.37107	-0.00015087	-2.3237	-0.00094481	-2.6948	-0.0010957	406.58772324462274	24.588	2.4069	24.542	24.117	26.524	-0.04598					132	57	4	0	0	0	0.7932	1	995	995		25.574	0	1	381610			29287	5137	19596	19606	33332	33332					0.14474556181653497
LKRIKACY	8	Unmodified	_LKRIKACY_					0	0	0		chr10:89285264-89286872|20|25.55|0.0|21.28|+|0|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|7;chr10:89285264-89286796|15|22.93|0.0|21.13|+|1|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286796,89288116|IFIT2,None|10	chr10:89285264-89286872|20|25.55|0.0|21.28|+|0|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|7	chr10:89285264-89286872|20|25.55|0.0|21.28|+|0|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.7957458496094	2	497.796955	993.579357	0.10323	5.1388E-05	-2.4116	-0.0012005	-2.3084	-0.0011491	497.7955420598114	48.958	1.1928	48.952	48.605	49.798	-0.0056381					56	26	3	0	0	0	0.86288	1	4081	4081		26.796	0	1	455850			29288	87	19597	19607	33333	33333					0.08231001050330633
LKRKCQTKRKK	11	Unmodified	_LKRKCQTKRKK_					0	0	0		ENST00000395425.6_1_14:55647481-55649137:-|nuORF	ENST00000395425.6_1_14:55647481-55649137:-|nuORF	ENST00000395425.6_1_14:55647481-55649137:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.97076416015625	3	472.969645	1415.88711	0.051384	2.4303E-05	2.6367	0.0012471	2.6881	0.0012714	472.97087077601634	49.142	2.3722	49.137	48.43	50.803	-0.0056381					193	58	5	0	0	0	0.80813	1	4100	4100		9.6461	0.84683	1	1340700			29289	11093	19598	19608	33334	33334					0.19579820581338936
LKRKCQTKRKK	11	Unmodified	_LKRKCQTKRKK_					0	0	0		ENST00000395425.6_1_14:55647481-55649137:-|nuORF	ENST00000395425.6_1_14:55647481-55649137:-|nuORF	ENST00000395425.6_1_14:55647481-55649137:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.9707336425781	3	472.969645	1415.88711	-0.95096	-0.00044977	3.7216	0.0017602	2.7706	0.0013104	472.971385713144	49.546	3.8081	49.55	48.972	52.78	0.0035973					232	95	4	0	0	0	0.79716	1	4161	4161		11.932	2.7206	1	1400600			29290	11093	19598	19608	33335	33335					0.19579820581338936
LKRKFTGF	8	Unmodified	_LKRKFTGF_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-5|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;nc|ENSG00000138658|Q86YA3-4|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.80303955078125	2	498.803094	995.591636	-1.4653	-0.00073091	2.6111	0.0013024	1.1457	0.00057149	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.89043	3	4343	4261;4305;4343		53.351	12.779	1	2964600			29291	4314	19599	19609	33336;33337;33338	33338					0.09366360785031702
LKRKFTGF	8	Unmodified	_LKRKFTGF_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-5|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;nc|ENSG00000138658|Q86YA3-4|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8035583496094	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.86288	7	4485	4429;4453;4464;4475;4485;4497;4509		45.952	12.318	1	2118300			29292	4314	19599	19609	33339;33340;33341;33342;33343;33344;33345	33343					0.09366360785031702
LKRKFTGF	8	Unmodified	_LKRKFTGF_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-5|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;nc|ENSG00000138658|Q86YA3-4|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8034362792969	2	498.803094	995.591636	-0.601	-0.00029978	1.7229	0.00085937	1.1219	0.00055959	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.87922	1	4605	4605		31.955	1.4512	1	2240900			29293	4314	19599	19609	33346	33346					0.09366360785031702
LKRKFTGF	8	Unmodified	_LKRKFTGF_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-5|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;nc|ENSG00000138658|Q86YA3-4|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8033752441406	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.86288	2	4498	4498;4543		45.952	5.3793	1	2702800			29294	4314	19599	19609	33347;33348	33347					0.09366360785031702
LKRKFTGF	8	Unmodified	_LKRKFTGF_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-5|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;nc|ENSG00000138658|Q86YA3-4|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.803955078125	2	498.803094	995.591636	-0.60409	-0.00030132	1.8273	0.00091145	1.2232	0.00061013	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.86288	3	4106	4106;4171;4180		31.955	6.5047	1	2424700			29295	4314	19599	19609	33349;33350;33351	33349					0.09366360785031702
LKRKFTGF	8	Unmodified	_LKRKFTGF_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-5|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;nc|ENSG00000138658|Q86YA3-4|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.8032531738281	2	498.803094	995.591636	0.36192	0.00018053	0.83184	0.00041492	1.1938	0.00059545	498.8033596820182	51.857	1.6149	51.917	51.457	53.072	0.059719					144	50	4	0	0	0	0.87922	5	4206	4160;4187;4206;4216;4224		47.916	15.961	1	2712200			29296	4314	19599	19609	33352;33353;33354;33355;33356	33354					0.09366360785031702
LKRKFTGF	8	Unmodified	_LKRKFTGF_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-5|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;nc|ENSG00000138658|Q86YA3-4|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.8034362792969	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.8347	4	4195	4180;4188;4195;4218		45.952	19.156	1	2538600			29297	4314	19599	19609	33357;33358;33359;33360	33359					0.09366360785031702
LKRKFTGF	8	Unmodified	_LKRKFTGF_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-5|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;nc|ENSG00000138658|Q86YA3-4|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.8036193847656	2	498.803094	995.591636	-0.49026	-0.00024454	1.7345	0.0008652	1.2443	0.00062066	498.8037935233339	49.549	1.6037	50.009	49.582	51.185	0.45983					103	38	4	0	0	0	0.87479	2	4877	4877;4907		31.955	2.1133	1	5854700			29298	4314	19599	19609	33361;33362	33361					0.09366360785031702
LKRKLLLKYST	11	Unmodified	_LKRKLLLKYST_					0	0	0		ENST00000557943.5_1_15:76508771-76508903:-|nuORF	ENST00000557943.5_1_15:76508771-76508903:-|nuORF	ENST00000557943.5_1_15:76508771-76508903:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.966552734375	3	454.965895	1361.87586	0.25699	0.00011692	2.708	0.001232	2.9649	0.0013489	455.3015203724045	42.794	1.2828	42.764	42.203	43.486	-0.029461					89	30	4	0	0	0	0.78683	1	3250	3250		14.086	3.4992	1	365500			29299	13782	19600	19610	33363	33363					0.2093932175887403
LKRKLLLKYST	11	Unmodified	_LKRKLLLKYST_					0	0	0		ENST00000557943.5_1_15:76508771-76508903:-|nuORF	ENST00000557943.5_1_15:76508771-76508903:-|nuORF	ENST00000557943.5_1_15:76508771-76508903:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.96673583984375	3	454.965895	1361.87586	-1.2289	-0.00055911	3.2996	0.0015012	2.0707	0.00094208	454.9672058394649	41.291	1.22	41.25	40.922	42.142	-0.040806					93	31	4	0	0	0	0.81219	1	3105	3105		8.7993	0	1	820870			29300	13782	19600	19610	33364	33364					0.2093932175887403
LKRKMKTTK	9	Unmodified	_LKRKMKTTK_					0	0	0			REV__ENSG00000109670|ENST00000281708|FBXW7	REV__ENSG00000109670|ENST00000281708|FBXW7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3633422851562	2	567.362993	1132.71143	-0.8743	-0.00049604	1.8048	0.001024	0.93054	0.00052795	567.3638800486743	44.538	2.1986	44.515	43.895	46.093	-0.023079					155	51	5	0	0	0	0.7932	1	3527	3527		23.042	4.7181	1	2273000	+		29301	17765	19601	19611	33365	33365					0.1503860606728722
LKRKQFHAS	9	Unmodified	_LKRKQFHAS_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.8300170898438	2	557.827632	1113.64071	1.3464	0.00075106	4.2948	0.0023958	5.6412	0.0031468	557.8300995899048	100.89	1.6699	100.93	100.47	102.14	0.046356					80	39	3	0	0	0	0.76764	1	10843	10843		34.173	5.023	1	658310			29302	5146	19602	19612	33366	33366					0.0884364907399231
LKRKRLIP	8	Unmodified	_LKRKRLIP_					0	0	0			REV__ENSG00000089022|ENST00000550735|MAPKAPK5	REV__ENSG00000089022|ENST00000550735|MAPKAPK5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.3614501953125	2	512.361111	1022.70767	-0.13841	-7.0915E-05	0.35065	0.00017966	0.21225	0.00010875	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.86906	1	7354	7354		8.2313	0	1	293160	+		29303	16955	19603	19613	33367	33367					0.1972230435574147
LKRKRQAGSE	10	Unmodified	_LKRKRQAGSE_					0	0	0		ENST00000557439.5_1_14:104171572-104171944:-|nuORF	ENST00000557439.5_1_14:104171572-104171944:-|nuORF	ENST00000557439.5_1_14:104171572-104171944:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.783203125	2	586.846553	1171.67855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.23	1	113.23	112.73	113.73	0								0	0	0	0.45132	1	11702	11702		25.574	9.1009	1				29304	13774	19604	19614	33368	33368					0.09958115268796064
LKRKSPRGVLA	11	Unmodified	_LKRKSPRGVLA_					0	0	0			REV__ENSG00000122145|ENST00000373296|TBX22	REV__ENSG00000122145|ENST00000373296|TBX22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.9339599609375	3	408.934818	1223.78262	0.012697	5.1924E-06	-2.0601	-0.00084244	-2.0474	-0.00083725	408.933961832912	16.242	0.73024	16.301	16.127	16.857	0.059269					78	32	4	0	0	0	0.75906	1	121	121		20.03	4.6974	1	1215700	+		29305	18480	19605	19615	33369	33369					0.1796844209632127
LKRLAGPI	8	Unmodified	_LKRLAGPI_					0	0	0		ENST00000449182.1_1_7:121568218-121608013:+|nuORF	ENST00000449182.1_1_7:121568218-121608013:+|nuORF	ENST00000449182.1_1_7:121568218-121608013:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.2924499511719	2	434.292362	866.570172	0.19803	8.6003E-05	2.6646	0.0011572	2.8627	0.0012432	434.2922263287595	77.142	1.7516	77.711	77.417	79.168	0.56836					96	41	4	0	0	0	0.86288	1	8796	8796		26.796	1.3459	1	559930			29306	11871	19606	19616	33370	33370					0.13154975756322074
LKRLCLMWTRR	11	Oxidation (M)	_LKRLCLM(Oxidation (M))WTRR_		LKRLCLM(1)WTRR		LKRLCLM(47)WTRR	0	0	1		ENST00000512084.5_1_5:41739559-41749654:-|nuORF	ENST00000512084.5_1_5:41739559-41749654:-|nuORF	ENST00000512084.5_1_5:41739559-41749654:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.9515075683594	3	497.951486	1490.83263	0.72177	0.00035941	-1.57	-0.00078179	-0.84824	-0.00042238	497.9506594640085	23.888	0.82867	23.944	23.607	24.435	0.055487					39	21	3	0	0	0	0.56641	1	846	846		47.228	27.965	1	87871			29307	13031	19607	19617	33371	33371		194			0.10684485438264346
LKRLQKLTEH	10	Unmodified	_LKRLQKLTEH_					0	0	0			REV__nc|ENSG00000154957|P17022-2|ZNF18	REV__nc|ENSG00000154957|P17022-2|ZNF18	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2285461425781	3	422.594461	1264.76155	-0.23662	-9.9996E-05	-4.128	-0.0017445	-4.3646	-0.0018445	422.5926704291555	54.089	1.593	54.674	54.081	55.674	0.58474					79	37	3	0	0	0	0.37624	1	5451	5451		20.03	2.1973	1	562760	+		29308	20410	19608	19618	33372	33372					0.13976431996798055
LKRMFRRIYRH	11	Unmodified	_LKRMFRRIYRH_					0	0	0		ENSG00000146834|ENST00000310512|MEPCE;nc|ENSG00000289690|Q7L2J0-2|MEPCE	ENSG00000146834|ENST00000310512|MEPCE	ENSG00000146834|ENST00000310512|MEPCE	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.9812622070312	3	525.977023	1574.90924	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.96	1	106.14	105.64	106.64	0.18647								0	0	0	0.56276	1	12963	12963		5.6988	2.2901	1				29309	4862	19609	19619	33373	33373					0.14478045049804678
LKRMKATF	8	Unmodified	_LKRMKATF_					0	0	0			REV__ENSG00000163632|ENST00000295896|C3orf49	REV__ENSG00000163632|ENST00000295896|C3orf49	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.795166015625	2	497.796955	993.579357	-0.66885	-0.00033295	-1.4191	-0.00070643	-2.088	-0.0010394	497.7958642477004	48.816	1.5297	48.791	47.88	49.41	-0.025112					123	35	4	0	0	0	0.89494	1	4136	4136		37.159	0.13063	1	502690	+		29310	20948	19610	19620	33374	33374					0.08231001050342002
LKRMKATF	8	Unmodified	_LKRMKATF_					0	0	0			REV__ENSG00000163632|ENST00000295896|C3orf49	REV__ENSG00000163632|ENST00000295896|C3orf49	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.7951965332031	2	497.796955	993.579357	-0.62466	-0.00031096	-1.5248	-0.00075906	-2.1495	-0.00107	497.7959443257759	48.896	1.0734	48.921	48.637	49.71	0.025574					60	26	3	0	0	0	0.884	1	3733	3733		33.516	0	1	414050	+		29311	20948	19610	19620	33375	33375					0.08231001050342002
LKRNPFLME	9	Unmodified	_LKRNPFLME_					0	0	0			REV__ENST00000320081.9_1_2:29397265-29404505:+|nuORF	REV__ENST00000320081.9_1_2:29397265-29404505:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3193969726562	2	574.318251	1146.62195	-1.0331	-0.00059332	3.0688	0.0017625	2.0358	0.0011692	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.64922	1	9910	9910		44.117	1.7207	1	1380900	+		29312	24994	19611	19621	33376	33376					0.05450351387912633
LKRPGADRRV	10	Unmodified	_LKRPGADRRV_					0	0	0		ENST00000527206.1_1_11:118992311-118998053:+|nuORF;ENST00000529354.1_1_11:118992311-119001682:+|nuORF	ENST00000527206.1_1_11:118992311-118998053:+|nuORF	ENST00000527206.1_1_11:118992311-118998053:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	584.356689453125	2	584.357088	1166.69962	0.73696	0.00043065	-2.5462	-0.0014879	-1.8092	-0.0010572	584.3556286390271	92.429	3.0487	92.654	91.107	94.155	0.22547					201	72	4	0	0	0	0.86272	1	9290	9290		24.519	1.4767	1	730880			29313	13276	19612	19622	33377	33377					0.12294125368293862
LKRPLRPRKER	11	Unmodified	_LKRPLRPRKER_					0	0	0			REV__ENSG00000169592|ENST00000563197|INO80E	REV__ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.6463623046875	3	483.647671	1447.92118	-0.19648	-9.5025E-05	-2.4553	-0.0011875	-2.6518	-0.0012825	483.6463549494067	46.472	1.6155	46.393	45.933	47.548	-0.079002					182	48	5	0	0	0	0.78083	1	3462	3462		15.337	3.8829	1	4742900	+		29314	21588	19613	19623	33378	33378					0.21513985064598273
LKRPRGLS	8	Unmodified	_LKRPRGLS_					0	0	0		chr16:2979936-2980286|54|11.65|0.42|4.8|-|ENST00000575632|PKMYT1,PKMYT1;nc|ENSG00000127564|Q99640-2|PKMYT1;nc|ENSG00000127564|Q99640-3|PKMYT1;ENSG00000127564|ENST00000262300|PKMYT1	chr16:2979936-2980286|54|11.65|0.42|4.8|-|ENST00000575632|PKMYT1,PKMYT1	chr16:2979936-2980286|54|11.65|0.42|4.8|-|ENST00000575632|PKMYT1,PKMYT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.79986572265625	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.8347	1	3340	3340		23.042	0	1	1570500			29315	204	19614	19624	33379	33379					0.11636592499519338
LKRPSFLDD	9	Unmodified	_LKRPSFLDD_					0	0	0		ENSG00000150667|ENST00000350221|FSIP1	ENSG00000150667|ENST00000350221|FSIP1	ENSG00000150667|ENST00000350221|FSIP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3164672851562	2	545.798206	1089.58186	0.15772	8.6085E-05	-1.502	-0.00081978	-1.3443	-0.00073369	545.7963653563323	88.932	0.29805	89.139	89	89.298	0.20731					9	6	2	0	0	0	0.20789	1	8867	8867		34.173	5.0025	1	60948			29316	5077	19615	19625	33380	33380					0.04065127988974382
LKRQEEELM	9	Unmodified	_LKRQEEELM_					0	0	0		nc|ENSG00000163629|Q12923-2|PTPN13;nc|ENSG00000163629|Q12923-3|PTPN13;ENSG00000163629|ENST00000411767|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13	nc|ENSG00000163629|Q12923-2|PTPN13	nc|ENSG00000163629|Q12923-2|PTPN13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.30859375	2	588.308081	1174.60161	-0.12071	-7.1014E-05	0.84488	0.00049705	0.72417	0.00042603	588.308577510961	38.05	0.82624	38.572	38.21	39.036	0.52235					31	20	2	0	0	0	0.44421	1	3131	3131		54.776	1.6874	1	977740			29317	5841	19616	19626	33381	33381					0.02129135937434512
LKRQKNRSC	9	Unmodified	_LKRQKNRSC_					0	0	0		ENST00000356362.6_1_7:105148838-105148922:-|nuORF	ENST00000356362.6_1_7:105148838-105148922:-|nuORF	ENST00000356362.6_1_7:105148838-105148922:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.363037109375	2	566.822024	1131.62949	0.14438	8.184E-05	-3.0882	-0.0017505	-2.9438	-0.0016686	566.8204144425777	44.509	0.24467	44.505	44.331	44.576	-0.0041618					6	5	2	0	0	0	0.20789	1	3494	3494		39.253	7.298	1	30239			29318	10367	19617	19627	33382	33382					0.06894503708190314
LKRQLAMVGAL	11	Unmodified	_LKRQLAMVGAL_					0	0	0			REV__nc|ENSG00000115306|Q01082-3|SPTBN1	REV__nc|ENSG00000115306|Q01082-3|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.91522216796875	3	400.581276	1198.722	2.7177	0.0010886	-4.4182	-0.0017699	-1.7006	-0.00068121	400.57942388573207	112.17	0.64908	112.15	112.05	112.69	-0.025414					36	14	3	0	0	0	0.70584	1	12451	12451		30.569	1.0181	1	3056300	+		29319	18106	19618	19628	33383	33383					0.13058588721742126
LKRQLAMVGAL	11	Unmodified	_LKRQLAMVGAL_					0	0	0			REV__nc|ENSG00000115306|Q01082-3|SPTBN1	REV__nc|ENSG00000115306|Q01082-3|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.9152526855469	3	400.581276	1198.722	2.7173	0.0010885	-4.1486	-0.0016619	-1.4313	-0.00057337	400.5795787235088	114.47	0.27129	114.44	114.28	114.55	-0.024452					14	9	2	0	0	0	0.732	1	12688	12688		26.063	2.6855	1	54461	+		29320	18106	19618	19628	33384	33384					0.13058588721742126
LKRQLAMVGAL	11	Unmodified	_LKRQLAMVGAL_					0	0	0			REV__nc|ENSG00000115306|Q01082-3|SPTBN1	REV__nc|ENSG00000115306|Q01082-3|SPTBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.5806579589844	3	400.581276	1198.722	-1.7912	-0.00071753	0.06228	2.4948E-05	-1.729	-0.00069259	400.5810902225448	111.65	0.42501	111.76	111.55	111.97	0.11118					38	12	4	0	0	0	0.74405	1	12018	12018		23.378	0	1	12328000	+		29321	18106	19618	19628	33385	33385					0.13058588721742126
LKRQLAMVGAL	11	Unmodified	_LKRQLAMVGAL_					0	0	0			REV__nc|ENSG00000115306|Q01082-3|SPTBN1	REV__nc|ENSG00000115306|Q01082-3|SPTBN1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	400.581276	1198.722	2.7173	0.0010885	-4.1486	-0.0016619	-1.4313	-0.00057337	400.5795787235088	114.47	0.27129	114.44	114.28	114.55	-0.024452	0.039717	0.00017267	NaN	26.063	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54461	+		29322	18106	19618	19628							0.13058588721742126
LKRQRKKEPLI	11	Unmodified	_LKRQRKKEPLI_					0	0	0		ENST00000503958.1_1_5:24487774-24493064:-|nuORF;ENSG00000040731|ENST00000264463|CDH10;ENST00000505020.1_1_5:26881247-26890759:-|nuORF;ENSG00000113100|ENST00000231021|CDH9	ENST00000503958.1_1_5:24487774-24493064:-|nuORF	ENST00000503958.1_1_5:24487774-24493064:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.53936767578125	3	470.308544	1407.9038	-0.17265	-8.12E-05	3.0146	0.0014178	2.8419	0.0013366	470.30893492478043	29.711	0.21653	29.621	29.447	29.663	-0.089544					6	4	2	0	0	0	0.18034	1	1889	1889		16.53	9.1301	1	17532			29323	929	19619	19629	33386	33386					0.21616644738992363
LKRRKEKEK	9	Unmodified	_LKRRKEKEK_					0	0	0			REV__ENSG00000124383|ENST00000244230|MPHOSPH10	REV__ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5527648925781	3	405.594573	1213.76189	0.32589	0.00013218	-0.47721	-0.00019355	-0.15132	-6.1376E-05	405.5944834558965	28.725	0.16923	28.695	28.61	28.779	-0.029207					5	3	2	0	0	0	0.20789	1	1753	1753		23.523	0	1	11925	+		29324	18582	19620	19630	33387	33387					0.16355851716616598
LKRRQTTFNIR	11	Unmodified	_LKRRQTTFNIR_					0	0	0		chr21:18738025-18745028|30|41.33|0.0|21.98|-|2|TE_info:L2,L2_dup55381,L2,LINE,donor,+,18745028,18745477|MIR548XHG,None|5	chr21:18738025-18745028|30|41.33|0.0|21.98|-|2|TE_info:L2,L2_dup55381,L2,LINE,donor,+,18745028,18745477|MIR548XHG,None|5	chr21:18738025-18745028|30|41.33|0.0|21.98|-|2|TE_info:L2,L2_dup55381,L2,LINE,donor,+,18745028,18745477|MIR548XHG,None|5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.2891540527344	3	478.288031	1431.84226	1.1949	0.00057149	1.2319	0.0005892	2.4267	0.0011607	478.2885117236148	34.113	0.86948	34.323	33.942	34.812	0.21002					51	20	3	0	0	0	0.72892	1	2501	2501		26.75	0	1	928240			29325	375	19621	19631	33388	33388					0.14361713039693313
LKRRRDLLQRL	11	Unmodified	_LKRRRDLLQRL_					0	0	0		ENSG00000160298|ENST00000291691|C21orf58;nc|nan|P58505-2|C21orf58	ENSG00000160298|ENST00000291691|C21orf58	ENSG00000160298|ENST00000291691|C21orf58	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	490.4516296386719	3	489.651193	1465.93175	0.71593	0.00035055	2.5004	0.0012243	3.2164	0.0015749	489.65214611588607	21.528	0.09376	21.511	21.486	21.58	-0.016428					6	4	2	0	0	0	0.18216	1	592	592		6.001	3.1492	1	36729			29326	5576	19622	19632	33389	33389					0.21741967719071909
LKRRRDLLQRL	11	Unmodified	_LKRRRDLLQRL_					0	0	0		ENSG00000160298|ENST00000291691|C21orf58;nc|nan|P58505-2|C21orf58	ENSG00000160298|ENST00000291691|C21orf58	ENSG00000160298|ENST00000291691|C21orf58	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	489.651193	1465.93175	0.078358	3.8368E-05	1.6898	0.00082741	1.7682	0.00086578	489.98618758186785	21.585	0.41449	21.667	21.435	21.85	0.081615	0.077619	-0.00034969	NaN	6.001	25	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123070			29327	5576	19622	19632							0.21741967719071909
LKRRRLEARRQ	11	Unmodified	_LKRRRLEARRQ_					0	0	0			REV__ENSG00000164615|ENST00000297156|CAMLG	REV__ENSG00000164615|ENST00000297156|CAMLG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.6458435058594	3	494.646442	1480.9175	-0.72365	-0.00035795	0.54937	0.00027175	-0.17427	-8.6203E-05	494.64675912184777	18.139	0.71388	18.184	18.028	18.742	0.044048					78	34	4	0	0	0	0.77205	1	297	297		17.167	3.0807	1	503220	+		29328	21096	19623	19633	33390	33390					0.1962731529076791
LKRRRLEARRQ	11	Unmodified	_LKRRRLEARRQ_					0	0	0			REV__ENSG00000164615|ENST00000297156|CAMLG	REV__ENSG00000164615|ENST00000297156|CAMLG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.6466064453125	3	494.646442	1480.9175	0.076173	3.7679E-05	-0.22285	-0.00011023	-0.14668	-7.2553E-05	494.64634392117614	18	0.57933	18.067	17.904	18.483	0.066298					57	30	3	0	0	0	0.81219	1	293	293		8.7993	0	1	765510	+		29329	21096	19623	19633	33391	33391					0.1962731529076791
LKRRVKKG	8	Unmodified	_LKRRVKKG_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.8389587402344	2	492.843085	983.671617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.25	1	114.18	113.68	114.68	-0.07								0	0	0	0.31173	1	12361	12361		8.2313	0	1				29330	5428	19624	19634	33392	33392					0.1791284717888857
LKRSKFAF	8	Unmodified	_LKRSKFAF_					0	0	0			REV__ENSG00000036828|ENST00000639785|CASR	REV__ENSG00000036828|ENST00000639785|CASR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.8033447265625	2	498.803094	995.591636	-0.49026	-0.00024454	1.7345	0.0008652	1.2443	0.00062066	498.8037935233339	49.549	1.6037	50.009	49.582	51.185	0.45983					103	38	4	0	0	0	0.87922	1	4817	4817		31.955	0	1	5854700	+		29331	16296	19625	19635	33393	33393					0.09366360785031702
LKRTMRTF	8	Unmodified	_LKRTMRTF_					0	0	0		ENST00000355264.8_1_10:75881656-75881839:-|nuORF	ENST00000355264.8_1_10:75881656-75881839:-|nuORF	ENST00000355264.8_1_10:75881656-75881839:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3070678710938	2	526.805311	1051.59607	-0.60466	-0.00031854	1.8512	0.0009752	1.2465	0.00065666	526.8081877026477	101.2	1.1278	101.2	100.73	101.86	0					41	26	2	0	0	0	0.87479	1	10291	10291		30.504	3.7075	1	206580			29332	10349	19626	19636	33394	33394					0.07233501936275388
LKRTMRTF	8	Unmodified	_LKRTMRTF_					0	0	0		ENST00000355264.8_1_10:75881656-75881839:-|nuORF	ENST00000355264.8_1_10:75881656-75881839:-|nuORF	ENST00000355264.8_1_10:75881656-75881839:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.3060302734375	2	526.805311	1051.59607	-0.036904	-1.9441E-05	-1.1847	-0.0006241	-1.2216	-0.00064354	527.3054504644606	99.375	1.7033	99.425	98.884	100.59	0.04982					129	39	5	0	0	0	0.89043	1	10576	10576		35.618	2.8059	1	1726400			29333	10349	19626	19636	33395	33395					0.07233501936275388
LKRTMRTF	8	Unmodified	_LKRTMRTF_					0	0	0		ENST00000355264.8_1_10:75881656-75881839:-|nuORF	ENST00000355264.8_1_10:75881656-75881839:-|nuORF	ENST00000355264.8_1_10:75881656-75881839:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	527.3057861328125	2	526.805311	1051.59607	-0.10039	-5.2887E-05	-0.963	-0.00050731	-1.0634	-0.0005602	526.807278834427	99.072	1.5943	99.295	98.744	100.34	0.22263					122	37	5	0	0	0	0.87479	1	10268	10268		30.504	1.3541	1	2555900			29334	10349	19626	19636	33396	33396					0.07233501936275388
LKRVEVPEALR	11	Unmodified	_LKRVEVPEALR_					0	0	0		ENSG00000170807|ENST00000458573|LMOD2	ENSG00000170807|ENST00000458573|LMOD2	ENSG00000170807|ENST00000458573|LMOD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.267822265625	3	437.269866	1308.78777	-0.59734	-0.0002612	-4.1797	-0.0018276	-4.777	-0.0020888	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.75779	1	4365	4365		20.315	0.68808	1	2564600			29335	6615	19627	19637	33397	33397					0.1457270116827658
LKRWSPPL	8	Unmodified	_LKRWSPPL_					0	0	0			REV__nc|ENSG00000088930|Q9H0D6-2|XRN2	REV__nc|ENSG00000088930|Q9H0D6-2|XRN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.80377197265625	2	498.803094	995.591636	-0.60409	-0.00030132	1.8273	0.00091145	1.2232	0.00061013	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.86791	1	4243	4243		28.254	5.2118	1	2424700	+		29336	16953	19628	19638	33398	33398					0.09366360785031702
LKRWSPPL	8	Unmodified	_LKRWSPPL_					0	0	0			REV__nc|ENSG00000088930|Q9H0D6-2|XRN2	REV__nc|ENSG00000088930|Q9H0D6-2|XRN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.8033447265625	2	498.803094	995.591636	0.36192	0.00018053	0.83184	0.00041492	1.1938	0.00059545	498.8033596820182	51.857	1.6149	51.917	51.457	53.072	0.059719					144	50	4	0	0	0	0.87922	1	4198	4198		31.955	0	1	2712200	+		29337	16953	19628	19638	33399	33399					0.09366360785031702
LKRYRMPLLPQ	11	Unmodified	_LKRYRMPLLPQ_					0	0	0			REV__ENSG00000240694|ENST00000522362|PNMA2	REV__ENSG00000240694|ENST00000522362|PNMA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2872314453125	3	472.28323	1413.82786	0.77187	0.00036454	-1.6704	-0.00078891	-0.89855	-0.00042437	472.281452278525	100.4	1.1212	100.55	99.895	101.02	0.15073					61	25	3	0	0	0	0.17521	1	10420	10420		17.167	0	1	103190	+		29338	23813	19629	19639	33400	33400					0.13749924567196103
LKSATKVKSN	10	Unmodified	_LKSATKVKSN_					0	0	0			REV__nc|ENSG00000005194|Q6FI81-3|CIAPIN1	REV__nc|ENSG00000005194|Q6FI81-3|CIAPIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3272705078125	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.85633	1	12261	12261		21.686	2.3258	1	4041000	+		29339	16080	19630	19640	33401	33401					0.10537389914406958
LKSCPKINPKI	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LKSCPKINPKI_					1	0	0			REV__ENST00000400324.8_1_13:60240656-60240770:-|nuORF	REV__ENST00000400324.8_1_13:60240656-60240770:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8822631835938	2	641.881216	1281.74788	-1.1528	-0.00073997	3.0376	0.0019498	1.8848	0.0012098	641.8829970841505	95.709	2.5048	95.911	94.329	96.834	0.20242					216	59	5	0	0	0	0.55601	1	9828	9828		47.96	15.147	1	1922900	+		29340	26248	19631	19641	33402	33402					0.11827438173349947
LKSERRLSQ	9	Unmodified	_LKSERRLSQ_					0	0	0			REV__ENST00000510353.5_1_4:159593571-159600541:+|nuORF	REV__ENST00000510353.5_1_4:159593571-159600541:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8272705078125	2	558.827829	1115.64111	-0.1486	-8.3042E-05	-0.26564	-0.00014845	-0.41424	-0.00023149	558.8274959479605	65.531	0.78168	65.558	65.246	66.027	0.027321					103	42	3	0	0	0	0.7932	1	6220	6220		21.686	0.73882	1	6703400	+		29341	27951	19632	19642	33403	33403					0.087910240031988
LKSHKGSIIVK	11	Unmodified	_LKSHKGSIIVK_					0	0	0		nc|ENSG00000222011|Q8N0U4-3|FAM185A;ENSG00000222011|ENST00000413034|FAM185A	nc|ENSG00000222011|Q8N0U4-3|FAM185A	nc|ENSG00000222011|Q8N0U4-3|FAM185A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.93060302734375	3	403.92744	1208.76049	0.25224	0.00010189	2.3681	0.00095656	2.6204	0.0010584	403.92827500047315	43.269	1.3362	43.703	43.17	44.506	0.4334					104	32	4	0	0	0	0.74344	1	3937	3937		23.514	4.2517	1	3935700			29342	8696	19633	19643	33404	33404					0.16446217627867554
LKSIQNVSHLI	11	Unmodified	_LKSIQNVSHLI_					0	0	0		ENSG00000137462|ENST00000642700|TLR2	ENSG00000137462|ENST00000642700|TLR2	ENSG00000137462|ENST00000642700|TLR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3248291015625	2	626.374612	1250.73467	1.2919	0.00080921	4.1984	0.0026298	5.4903	0.003439	626.3772233463568	57.934	1.2018	58.014	57.344	58.546	0.079643					72	55	2	0	0	0	0.17437	1	4960	4960		22.58	0	1	183070			29343	4201	19634	19644	33405	33405					0.11933323385619587
LKSKSGLA	8	Unmodified	_LKSKSGLA_					0	0	0		nc|ENSG00000075043|O43526-4|KCNQ2;nc|ENSG00000075043|O43526-5|KCNQ2;nc|ENSG00000075043|O43526-3|KCNQ2;nc|ENSG00000075043|O43526-2|KCNQ2;ENSG00000075043|ENST00000359125|KCNQ2	nc|ENSG00000075043|O43526-4|KCNQ2	nc|ENSG00000075043|O43526-4|KCNQ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.2521667480469	2	402.252903	802.491253	-0.39767	-0.00015996	-0.3862	-0.00015535	-0.78388	-0.00031532	402.2527064197999	20.146	0.42935	20.076	19.913	20.343	-0.069733					30	16	2	0	0	0	0.86288	1	500	500		26.796	1.3459	1	87164			29344	1318	19635	19645	33406	33406					0.0821070373136763
LKSLFPRN	8	Unmodified	_LKSLFPRN_					0	0	0			REV__nc|ENSG00000182667|Q9P121-3|NTM	REV__nc|ENSG00000182667|Q9P121-3|NTM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7910461425781	2	487.792727	973.5709	-0.24073	-0.00011743	-3.9662	-0.0019347	-4.2069	-0.0020521	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.89962	1	9703	9703		38.806	1.647	1	1981400	+		29345	22540	19636	19646	33407	33407					0.0830577040536582
LKSLGKLAM	9	Unmodified	_LKSLGKLAM_					0	0	0		ENSG00000073849|ENST00000169298|ST6GAL1	ENSG00000073849|ENST00000169298|ST6GAL1	ENSG00000073849|ENST00000169298|ST6GAL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.80108642578125	2	480.799163	959.583773	0.73477	0.00035328	2.7032	0.0012997	3.438	0.001653	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.78536	1	9938	9938		29.15	0	1	18148000			29346	1300	19637	19647	33408	33408					0.10236465473246881
LKSLGKLAM	9	Unmodified	_LKSLGKLAM_					0	0	0		ENSG00000073849|ENST00000169298|ST6GAL1	ENSG00000073849|ENST00000169298|ST6GAL1	ENSG00000073849|ENST00000169298|ST6GAL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.80096435546875	2	480.799163	959.583773	1.8222	0.00087609	2.1635	0.0010402	3.9856	0.0019163	480.8000859655465	94.893	2.2797	95.326	94.801	97.081	0.4324					179	54	5	0	0	0	0.78058	1	11412	11412		30.504	6.3009	1	7713500			29347	1300	19637	19647	33409	33409					0.10236465473246881
LKSLHQQSTQL	11	Unmodified	_LKSLHQQSTQL_					0	0	0		nc|ENSG00000007062|O43490-5|PROM1;nc|ENSG00000007062|O43490-3|PROM1;nc|ENSG00000007062|O43490-4|PROM1;nc|ENSG00000007062|O43490-6|PROM1;nc|ENSG00000007062|O43490-7|PROM1;nc|ENSG00000007062|O43490-2|PROM1;ENSG00000007062|ENST00000447510|PROM1;ENST00000511153.5_3_4:16004971-16040619:-|nuORF	nc|ENSG00000007062|O43490-5|PROM1	nc|ENSG00000007062|O43490-5|PROM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.36181640625	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.61369	2	12468	12468;12659		42.864	3.6114	1	27133000			29348	718	19638	19648	33410;33411	33410					0.07451545000549231
LKSLHQQSTQL	11	Unmodified	_LKSLHQQSTQL_					0	0	0		nc|ENSG00000007062|O43490-5|PROM1;nc|ENSG00000007062|O43490-3|PROM1;nc|ENSG00000007062|O43490-4|PROM1;nc|ENSG00000007062|O43490-6|PROM1;nc|ENSG00000007062|O43490-7|PROM1;nc|ENSG00000007062|O43490-2|PROM1;ENSG00000007062|ENST00000447510|PROM1;ENST00000511153.5_3_4:16004971-16040619:-|nuORF	nc|ENSG00000007062|O43490-5|PROM1	nc|ENSG00000007062|O43490-5|PROM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3629760742188	2	641.859326	1281.7041	7.1333	0.0045786	-2.0698	-0.0013285	5.0635	0.0032501	642.3587393557684	111.56	0.41818	111.6	111.28	111.7	0.032707					29	15	2	0	0	0	0.66929	1	13512	13512		36.447	4.9169	1	6618000			29349	718	19638	19648	33412	33412					0.07451545000549231
LKSLKQGY	8	Unmodified	_LKSLKQGY_					0	0	0			REV__ENST00000463422.5_1_2:85981774-86000028:+|nuORF	REV__ENST00000463422.5_1_2:85981774-86000028:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.7436218261719	2	468.779285	935.544017	0.52553	0.00024636	-0.19044	-8.9276E-05	0.33508	0.00015708	468.77896003042605	23.449	0.51615	22.875	22.62	23.136	-0.57415					26	11	3	0	0	0	0.4196	1	1079	1079		13.775	0	1	282950	+		29350	27074	19639	19649	33413	33413					0.07366661794173979
LKSLMKKLYK	10	Unmodified	_LKSLMKKLYK_					0	0	0			REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3796997070312	2	626.396502	1250.77845	0.92612	0.00058012	4.1363	0.0025909	5.0624	0.0031711	626.3983242787446	105.8	0.61385	105.9	105.57	106.19	0.099007					33	15	4	0	0	0	0.37624	1	11320	11320		9.7057	0	1	413330	+		29351	21226	19640	19650	33414	33414					0.16309216558374828
LKSLTKLMFRQ	11	Unmodified	_LKSLTKLMFRQ_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6087646484375	3	455.607602	1363.80098	-1.2087	-0.00055071	3.0113	0.001372	1.8026	0.00082126	455.6088629206426	71.18	2.4746	71.313	70.49	72.965	0.13356					216	101	3	0	0	0	0.72892	1	6418	6418		26.75	0.85799	1	705050	+		29352	29575	19641	19651	33415	33415					0.13362815955997576
LKSLTKLMFRQ	11	Unmodified	_LKSLTKLMFRQ_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.6076965332031	3	455.607602	1363.80098	0.49166	0.00022401	1.2016	0.00054744	1.6932	0.00077144	455.608083696801	71.141	2.3916	71.271	70.4	72.791	0.12965					199	101	2	0	0	0	0.75779	1	6435	6435		20.315	0	1	552710	+		29353	29575	19641	19651	33416	33416					0.13362815955997576
LKSLTKLMFRQ	11	Unmodified	_LKSLTKLMFRQ_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6083679199219	3	455.607602	1363.80098	-0.55129	-0.00025117	2.3973	0.0010922	1.846	0.00084106	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.75457	1	6991	6991		21.032	1.4053	1	1732400	+		29354	29575	19641	19651	33417	33417					0.13362815955997576
LKSLTKLMFRQ	11	Unmodified	_LKSLTKLMFRQ_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.60736083984375	3	455.607602	1363.80098	-0.22489	-0.00010246	2.0622	0.00093956	1.8373	0.0008371	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.67041	2	7685	7418;7685		36.318	7.7409	1	1863900	+		29355	29575	19641	19651	33418;33419	33419					0.13362815955997576
LKSMGLEVVL	10	Unmodified	_LKSMGLEVVL_					0	0	0		nc|ENSG00000165240|Q04656-5|ATP7A;ENSG00000165240|ENST00000341514|ATP7A;nc|ENSG00000165240|Q04656-2|ATP7A;nc|ENSG00000165240|Q04656-3|ATP7A;nc|ENSG00000165240|Q04656-4|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	nc|ENSG00000165240|Q04656-5|ATP7A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.8252563476562	2	544.822835	1087.63112	-0.54498	-0.00029692	2.5244	0.0013753	1.9794	0.0010784	545.325192596009	98.647	1.0445	98.647	98.386	99.431	0					31	25	2	0	0	0	0.86348	1	9965	9965		31.53	3.4483	1	172000			29356	6063	19642	19652	33420	33420					0.09080699953574367
LKSNFVHL	8	Unmodified	_LKSNFVHL_					0	0	0		ENST00000486372.1_1_9:132565440-132566668:+|nuORF;ENSG00000136816|ENST00000259339|TOR1B	ENST00000486372.1_1_9:132565440-132566668:+|nuORF	ENST00000486372.1_1_9:132565440-132566668:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2771911621094	2	479.279452	956.544351	0.7512	0.00036004	-4.266	-0.0020446	-3.5148	-0.0016846	479.2773206113693	97.297	1.0964	97.46	96.922	98.018	0.16317					63	25	3	0	0	0	0.84341	1	10125	10125		24.203	4.206	1	731730			29357	4138	19643	19653	33421	33421					0.0643408151404401
LKSNLLGPRTK	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LKSNLLGPRTK_					1	0	0			REV__ENSG00000102910|ENST00000285737|LONP2	REV__ENSG00000102910|ENST00000285737|LONP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.8930053710938	2	634.887887	1267.76122	2.7957	0.0017749	4.3447	0.0027584	7.1403	0.0045333	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.45992	1	11614	11614		54.722	7.065	1	42597000	+		29358	17372	19644	19654	33422	33422					0.13805012276952766
LKSNSFKP	8	Unmodified	_LKSNSFKP_					0	0	0		ENST00000466201.1_1_10:15145448-15145487:-|nuORF	ENST00000466201.1_1_10:15145448-15145487:-|nuORF	ENST00000466201.1_1_10:15145448-15145487:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.2400207519531	2	460.763635	919.512717	-0.77656	-0.00035781	0.75912	0.00034978	-0.017438	-8.0348E-06	460.7636139695352	26.993	0.35745	26.817	26.658	27.016	-0.17559					12	7	3	0	0	0	0.4196	1	1543	1543		34.173	0	1	31634			29359	12128	19645	19655	33423	33423					0.04974088760093309
LKSRQLKLRKN	11	Unmodified	_LKSRQLKLRKN_					0	0	0		ENST00000343115.8_1_11:110108371-110118457:-|nuORF	ENST00000343115.8_1_11:110108371-110118457:-|nuORF	ENST00000343115.8_1_11:110108371-110118457:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.9484558105469	3	461.96841	1382.8834	-1.0613	-0.00049029	3.5563	0.0016429	2.4949	0.0011526	461.97032599430855	107.45	0.29405	107.59	107.4	107.69	0.13866					10	6	2	0	0	0	0.17648	1	11533	11533		15.921	4.2847	1	114880			29360	10277	19646	19656	33424	33424					0.20727474079149033
LKSRTVPL	8	Unmodified	_LKSRTVPL_					0	0	0		ENST00000294383.6_1_1:55533016-55533118:-|nuORF	ENST00000294383.6_1_1:55533016-55533118:-|nuORF	ENST00000294383.6_1_1:55533016-55533118:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7895812988281	2	457.295102	912.575651	-0.35187	-0.00016091	-1.5797	-0.00072241	-1.9316	-0.00088331	457.2946693251359	44.856	2.0262	44.851	44.085	46.112	-0.0041618					94	47	3	0	0	0	0.4196	1	3653	3653		54.776	0	1	115870			29361	9704	19647	19657	33425	33425					0.11586654548113984
LKSSAELH	8	Unmodified	_LKSSAELH_					0	0	0			REV__ENSG00000138100|ENST00000380075|TRIM54	REV__ENSG00000138100|ENST00000380075|TRIM54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7448425292969	2	442.745442	883.476331	-1.2184	-0.00053945	-0.16486	-7.2993E-05	-1.3833	-0.00061244	442.74523759961534	89.283	0.76672	89.754	89.476	90.243	0.47068					54	18	4	0	0	0	0.86677	1	10619	10619		27.882	1.0861	1	4305700	+		29362	19441	19648	19658	33426	33426					0.029932118633610116
LKSSQLLEP	9	Unmodified	_LKSSQLLEP_					0	0	0		ENST00000420969.1_1_2:162357792-162360000:-|nuORF;ENST00000470300.5_1_1:247004234-247028597:-|nuORF;ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1	ENST00000420969.1_1_2:162357792-162360000:-|nuORF;ENSG00000153207|ENST00000648844|AHCTF1	ENSG00000153207|ENST00000648844|AHCTF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.8307189941406	2	507.795132	1013.57571	-0.0059104	-3.0013E-06	-0.60932	-0.00030941	-0.61523	-0.00031241	508.29659422320736	52.958	0.53506	53.372	53.169	53.704	0.4139					15	12	2	0	0	0	0.20789	1	5351	5351		35.618	20.753	1	74065			29363	5221;11457	19649	19659	33427	33427					0.06946609757471833
LKSVKSSC	8	Unmodified	_LKSVKSSC_					0	0	0		ENST00000595439.5_1_19:59100613-59100664:+|nuORF;ENST00000423888.5_1_22:51223617-51227406:+|nuORF;ENST00000494075.5_1_22:51223617-51227406:+|nuORF	ENST00000595439.5_1_19:59100613-59100664:+|nuORF	ENST00000595439.5_1_19:59100613-59100664:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.2236022949219	2	426.236396	850.458238	2.1229	0.00090484	-2.1296	-0.00090773	-0.0067781	-2.8891E-06	426.23526467293107	107.09	0.74653	107.19	106.82	107.57	0.10396					48	24	3	0	0	0	0.4196	1	13054	13054		4.3163	1.157	1	584860			29364	11506	19650	19660	33428	33428					0.02702753617018061
LKSVLSALW	9	Unmodified	_LKSVLSALW_					0	0	0		nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000115266|O95996-3|APC2;ENSG00000115266|ENST00000590469|APC2;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC;ENSG00000134982|ENST00000257430|APC	nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000134982|P25054-2|APC	nc|ENSG00000115266|O95996-2|APC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.80767822265625	2	508.810585	1015.60662	-1.4188	-0.00072192	-4.2069	-0.0021405	-5.6257	-0.0028624	508.8083690833738	83.198	1.9743	83.336	82.638	84.612	0.13811					103	45	4	0	0	0	0.77244	1	8019	8019		32.812	2.4947	1	3643200			29365	2826;3976	19651	19661	33429	33429					0.09943807862362064
LKTAEIEP	8	Unmodified	_LKTAEIEP_					0	0	0		ENSG00000187244|ENST00000270233|BCAM	ENSG00000187244|ENST00000270233|BCAM	ENSG00000187244|ENST00000270233|BCAM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7547607421875	2	450.755475	899.496398	0.64847	0.0002923	-3.528	-0.0015903	-2.8795	-0.001298	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.89494	1	7790	7790		37.159	6.6555	1	162850			29366	7850	19652	19662	33430	33430					0.042629628033296285
LKTIAPVP	8	Unmodified	_LKTIAPVP_					0	0	0			REV__nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	REV__nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.77410888671875	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.88915	1	3381	3381		35.201	3.2459	1	10965000	+		29367	22373	19653	19663	33431	33431					0.10712464770847419
LKTIAPVP	8	Unmodified	_LKTIAPVP_					0	0	0			REV__nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	REV__nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7752685546875	2	419.773471	837.53239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.138	1	52.115	51.615	52.615	-0.023849								0	0	0	0.29353	1	4596	4596		28.254	2.8041	1		+		29368	22373	19653	19663	33432	33432					0.10712464770847419
LKTIFYVF	8	Unmodified	_LKTIFYVF_					0	0	0			REV__nc|ENSG00000173821|Q63HN8|RNF213	REV__nc|ENSG00000173821|Q63HN8|RNF213	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.7638549804688	2	515.802229	1029.5899	-0.18962	-9.7807E-05	-4.326	-0.0022314	-4.5156	-0.0023292	515.799979318624	53.568	0.83719	54.153	53.789	54.626	0.58474					51	19	3	0	0	0	0.4196	1	5449	5449		85.359	16.573	1	781370	+		29369	21953	19654	19664	33433	33433					0.07629306976400585
LKTKMLNI	8	Unmodified	_LKTKMLNI_					0	0	0		ENSG00000123219|ENST00000396679|CENPK;chr5:65554946-65561497|61|23.43|0.5|5.56|-|ENST00000514814|CENPK,CENPK	ENSG00000123219|ENST00000396679|CENPK	ENSG00000123219|ENST00000396679|CENPK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.8013610839844	2	480.799163	959.583773	-0.79098	-0.0003803	4.1385	0.0019898	3.3475	0.0016095	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.91977	1	9949	9949		45.952	1.8352	1	18644000			29370	452	19655	19665	33434	33434					0.10236465473246881
LKTKPPLAPGT	11	Unmodified	_LKTKPPLAPGT_					0	0	0		ENSG00000135842|ENST00000367511|NIBAN1	ENSG00000135842|ENST00000367511|NIBAN1	ENSG00000135842|ENST00000367511|NIBAN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.8453979492188	2	561.847699	1121.68084	-1.2102	-0.00067997	-2.2064	-0.0012396	-3.4166	-0.0019196	561.8462778990414	97.077	2.3757	97.139	96.565	98.941	0.062225					142	54	5	0	0	0	0.70737	1	10261	10261		30.318	7.7381	1	1718900			29371	4058	19656	19666	33435	33435					0.12487150953870696
LKTKPPLAPGT	11	Unmodified	_LKTKPPLAPGT_					0	0	0		ENSG00000135842|ENST00000367511|NIBAN1	ENSG00000135842|ENST00000367511|NIBAN1	ENSG00000135842|ENST00000367511|NIBAN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	561.8455200195312	2	561.847699	1121.68084	-1.4136	-0.0007942	-2.0959	-0.0011776	-3.5094	-0.0019718	561.8463779100821	96.764	2.3842	96.966	96.53	98.914	0.20207					113	54	4	0	0	0	0.7434	1	9953	9953		23.523	0	1	806770			29372	4058	19656	19666	33436	33436					0.12487150953870696
LKTKRYFG	8	Unmodified	_LKTKRYFG_					0	0	0			REV__ENSG00000127863|ENST00000248484|TNFRSF19	REV__ENSG00000127863|ENST00000248484|TNFRSF19	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7994384765625	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.321	1	48.315	47.815	48.815	-0.0056419								0	0	0	0.29403	1	3983	3983		32.812	0.85756	1		+		29373	18750	19657	19667	33437	33437					0.08122056922422871
LKTKRYFG	8	Unmodified	_LKTKRYFG_					0	0	0			REV__ENSG00000127863|ENST00000248484|TNFRSF19	REV__ENSG00000127863|ENST00000248484|TNFRSF19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8001403808594	2	506.800552	1011.58655	-0.74642	-0.00037829	1.5683	0.00079484	0.82192	0.00041655	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.884	1	3761	3761		33.516	9.3128	1	258120	+		29374	18750	19657	19667	33438	33438					0.08122056922422871
LKTMFTFF	8	Unmodified	_LKTMFTFF_					0	0	0		ENSG00000137225|ENST00000398776|CAPN11	ENSG00000137225|ENST00000398776|CAPN11	ENSG00000137225|ENST00000398776|CAPN11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7772216796875	2	517.772614	1033.53067	-1.0934	-0.00056611	-2.0466	-0.0010597	-3.14	-0.0016258	517.7717160803403	47.239	0.32747	48.162	47.871	48.199	0.92315					9	7	2	0	0	0	0.4196	1	4492	4492		8.8223	0.59103	1	385100			29375	4183	19658	19668	33439	33439					0.015250876905838595
LKTMTVAL	8	Unmodified	_LKTMTVAL_					0	0	0			REV__nc|ENSG00000179085|Q9P2X0-2|DPM3	REV__nc|ENSG00000179085|Q9P2X0-2|DPM3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.7671203613281	2	438.764789	875.515025	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.142	1	44.191	43.691	44.691	0.048996								0	0	0	0.3037	1	3094	3094		18.324	0.95945	1		+		29376	30063	19659	19669	33440	33440					0.07228801173550892
LKTQELREP	9	Unmodified	_LKTQELREP_					0	0	0		ENST00000492556.5_1_22:51018168-51020414:-|nuORF;ENST00000468532.5_1_22:51018168-51020803:-|nuORF;ENSG00000100288|ENST00000406938|CHKB	ENST00000492556.5_1_22:51018168-51020414:-|nuORF	ENST00000492556.5_1_22:51018168-51020414:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.315673828125	2	557.316763	1112.61897	-0.79394	-0.00044247	3.5202	0.0019619	2.7263	0.0015194	557.3186743205459	58.513	0.54236	58.905	58.482	59.024	0.39209					19	12	2	0	0	0	0.20789	1	6088	6088		22.58	0	1	127980			29377	1820	19660	19670	33441	33441					0.06716799534751772
LKTSTVIN	8	Unmodified	_LKTSTVIN_					0	0	0		nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-2|CUX1;ENSG00000257923|ENST00000292535|CUX1;nc|ENSG00000257923|P39880-3|CUX1;nc|ENSG00000257923|P39880-6|CUX1;nc|ENSG00000257923|P39880-4|CUX1	nc|ENSG00000257923|P39880-5|CUX1	nc|ENSG00000257923|P39880-5|CUX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26312255859375	2	438.263468	874.512382	-1.2142	-0.00053214	0.66524	0.00029155	-0.54896	-0.00024059	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.8537	1	3194	3194		25.574	0.12388	1	4828000			29378	8909	19661	19671	33442	33442					0.07010669040221273
LKTVKSLLH	9	Unmodified	_LKTVKSLLH_					0	0	0			REV__ENST00000399640.3_1_8:134471412-134471994:-|nuORF	REV__ENST00000399640.3_1_8:134471412-134471994:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.818603515625	2	519.837134	1037.65972	-0.1317	-6.846E-05	-1.7881	-0.00092954	-1.9198	-0.000998	519.8365055148247	84.606	0.12185	85.053	84.952	85.074	0.44736					4	2	2	0	0	0	0.20789	1	9887	9887		37.812	0	1	26741	+		29379	26233	19662	19672	33443	33443					0.1423918564505584
LKTVSTKGKTT	11	Unmodified	_LKTVSTKGKTT_					0	0	0		ENSG00000065618|ENST00000648076|COL17A1;nc|ENSG00000065618|Q9UMD9-2|COL17A1	ENSG00000065618|ENST00000648076|COL17A1	ENSG00000065618|ENST00000648076|COL17A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3536376953125	2	582.353345	1162.69214	-0.28407	-0.00016543	0.61818	0.00036	0.33411	0.00019457	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.62614	1	10669	10669		41.427	9.8968	1	61091000			29380	1136	19663	19673	33444	33444					0.11729928257386746
LKTVSTKGKTT	11	Unmodified	_LKTVSTKGKTT_					0	0	0		ENSG00000065618|ENST00000648076|COL17A1;nc|ENSG00000065618|Q9UMD9-2|COL17A1	ENSG00000065618|ENST00000648076|COL17A1	ENSG00000065618|ENST00000648076|COL17A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.353515625	2	582.353345	1162.69214	-0.84093	-0.00048972	1.0243	0.00059652	0.1834	0.0001068	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.71207	1	11436	11436		29.551	3.9767	1	77752000			29381	1136	19663	19673	33445	33445					0.11729928257386746
LKTVSTKGKTT	11	Unmodified	_LKTVSTKGKTT_					0	0	0		ENSG00000065618|ENST00000648076|COL17A1;nc|ENSG00000065618|Q9UMD9-2|COL17A1	ENSG00000065618|ENST00000648076|COL17A1	ENSG00000065618|ENST00000648076|COL17A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533935546875	2	582.353345	1162.69214	0.15817	9.2113E-05	0.03566	2.0766E-05	0.19383	0.00011288	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.69248	1	11401	11401		32.751	4.669	1	78004000			29382	1136	19663	19673	33446	33446					0.11729928257386746
LKVAKEHTV	9	Unmodified	_LKVAKEHTV_					0	0	0			REV__ENSG00000103534|ENST00000542583|TMC5	REV__ENSG00000103534|ENST00000542583|TMC5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.80859375	2	512.811116	1023.60768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.065	1	27.81	27.31	28.31	-0.25465								0	0	0	0.2981	1	1680	1680		41.427	0.85399	1		+		29383	17418	19664	19674	33447	33447					0.09682022231277188
LKVFHILPASN	11	Unmodified	_LKVFHILPASN_					0	0	0			REV__ENSG00000139304|ENST00000644991|PTPRQ	REV__ENSG00000139304|ENST00000644991|PTPRQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.86962890625	2	619.866423	1237.71829	2.311	0.0014325	2.5285	0.0015673	4.8395	0.0029999	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.69995	1	10429	10429		31.53	2.3598	1	4854700	+		29384	19532	19665	19675	33448	33448					0.1089424221952413
LKVIAHLSFLL	11	Unmodified	_LKVIAHLSFLL_					0	0	0			REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.6054382324219	3	418.604186	1252.79073	2.3213	0.0009717	-1.5708	-0.00065756	0.75043	0.00031413	418.6036475411712	49.177	2.7288	49.177	48.189	50.918	0.00016785					111	67	3	0	0	0	0.17868	1	4242	4242		5.6988	0	1	107990	+		29385	18297	19666	19676	33449	33449					0.1744457629306453
LKVKAIAVHR	10	Unmodified	_LKVKAIAVHR_					0	0	0			REV__ENSG00000267534|ENST00000646641|S1PR2	REV__ENSG00000267534|ENST00000646641|S1PR2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.2802124023438	2	567.877125	1133.7397	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.24	1	114.34	113.84	114.84	0.098114								0	0	0	0.45132	1	12229	12229		10.866	3.1753	1		+		29386	23969	19667	19677	33450	33450					0.17817672038881938
LKVKEREP	8	Unmodified	_LKVKEREP_					0	0	0			REV__nc|nan|Q8WZ69|C11orf40	REV__nc|nan|Q8WZ69|C11orf40	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7501525878906	2	499.803291	997.59203	0.54299	0.00027139	-0.62196	-0.00031086	-0.078968	-3.9469E-05	499.8029962844687	51.738	0.28791	52.406	52.189	52.477	0.66729					10	6	2	0	0	0	0.4196	1	5144	5144		25.45	0	1	156460	+		29387	30328	19668	19678	33451	33451					0.09313735714226823
LKVKIYCHFG	10	Unmodified	_LKVKIYCHFG_					0	0	0		ENST00000417549.1_1_13:28789725-28790031:+|nuORF	ENST00000417549.1_1_13:28789725-28790031:+|nuORF	ENST00000417549.1_1_13:28789725-28790031:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.1877746582031	3	403.226722	1206.65834	0.5506	0.00022202	1.8278	0.00073703	2.3784	0.00095905	403.22739495808116	32.464	0.38613	32.614	32.403	32.789	0.14996					12	8	2	0	0	0	0.37624	1	2305	2305		21.686	6.3483	1	77615			29388	11414	19669	19679	33452	33452					0.06327228284590092
LKVKKLLLPSS	11	Unmodified	_LKVKKLLLPSS_					0	0	0			REV__ENST00000486291.1_1_2:202262833-202263061:-|nuORF	REV__ENST00000486291.1_1_2:202262833-202263061:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	409.27947998046875	3	409.279591	1224.81694	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.683	1	16.683	16.183	17.183	0								0	0	0	0.56276	1	144	144		11.932	2.2862	1		+		29389	25140	19670	19680	33453	33453					0.21352845464571146
LKVLGTMHLE	10	Unmodified	_LKVLGTMHLE_					0	0	0		nc|ENSG00000198520|Q6PIY5-2|ARMH1;ENST00000357508.5_1_1:45155363-45190065:+|nuORF;ENSG00000198520|ENST00000535358|ARMH1	nc|ENSG00000198520|Q6PIY5-2|ARMH1	nc|ENSG00000198520|Q6PIY5-2|ARMH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.3111572265625	2	570.825909	1139.63727	1.04	0.00059368	-3.7194	-0.0021231	-2.6794	-0.0015295	570.8236050152827	56.909	0.63026	57.464	57.136	57.766	0.55512					21	14	2	0	0	0	0.37624	1	5937	5937		45.022	20.819	1	207670			29390	8281	19671	19681	33454	33454					0.07303218185097649
LKVLKPDTTY	10	Unmodified	_LKVLKPDTTY_					0	0	0		ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3439331054688	2	589.344989	1176.67542	-1.05	-0.00061881	-2.2542	-0.0013285	-3.3042	-0.0019473	589.3435611680267	91.272	1.3839	91.742	90.644	92.028	0.47068					106	33	4	0	0	0	0.86471	1	10903	10903		30.318	2.4355	1	1967800			29391	4219	19672	19682	33455	33455					0.09415427371413898
LKVLLAGV	8	Unmodified	_LKVLLAGV_					0	0	0		ENSG00000141337|ENST00000621439|ARSG	ENSG00000141337|ENST00000621439|ARSG	ENSG00000141337|ENST00000621439|ARSG	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.29632568359375	2	406.783839	811.553125	0.15799	6.4268E-05	3.3199	0.0013505	3.4779	0.0014147	406.7851176623025	36.697	1.0252	36.8	36.464	37.489	0.10306					45	28	2	0	0	0	0.4196	1	2085	2085		14.664	0	1	79584			29392	4491	19673	19683	33456	33456					0.13981055150509292
LKVLNLQHN	9	Unmodified	_LKVLNLQHN_					0	0	0		ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.8242797851562	2	539.822015	1077.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.017	1	33.229	32.729	33.729	0.21168								0	0	0	0.30416	1	2367	2367		29.15	6.1071	1				29393	5960	19674	19684	33457	33457					0.09376826979860198
LKVLWRFAS	9	Unmodified	_LKVLWRFAS_					0	0	0			REV__ENST00000372991.8_1_6:41903429-41903498:-|nuORF	REV__ENST00000372991.8_1_6:41903429-41903498:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3403930664062	2	560.337301	1118.66005	3.1419	0.0017605	2.5391	0.0014228	5.681	0.0031833	560.338642834655	107.37	1.0063	107.33	106.84	107.84	-0.034134					51	23	3	0	0	0	0.7932	1	11850	11850		24.203	1.1603	1	826960	+		29394	25741	19675	19685	33458	33458					0.10546605364902462
LKVMERQIEE	10	Unmodified	_LKVMERQIEE_					0	0	0			REV__nc|ENSG00000163617|Q8NCU4-2|CCDC191	REV__nc|ENSG00000163617|Q8NCU4-2|CCDC191	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.8449096679688	2	637.842287	1273.67002	1.438	0.00091722	3.6682	0.0023398	5.1062	0.003257	637.8446527464371	43.773	1.3238	43.781	43.309	44.632	0.0084534					84	31	4	0	0	0	0.49268	1	3074	3074		56.434	3.4971	1	2342900	+		29395	20943	19676	19686	33459	33459					0.04413380517326004
LKVMRGPK	8	Unmodified	_LKVMRGPK_					0	0	0		ENST00000546455.5_1_12:47473502-47610158:+|nuORF	ENST00000546455.5_1_12:47473502-47610158:+|nuORF	ENST00000546455.5_1_12:47473502-47610158:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7906188964844	2	464.791672	927.568792	-1.8726	-0.00087039	-0.29822	-0.00013861	-2.1709	-0.001009	464.79142205700754	36.889	1.6787	36.889	35.761	37.439	0					76	39	3	0	0	0	0.86288	1	2148	2148		26.796	0	1	196040			29396	13590	19677	19687	33460	33460					0.10211018395921201
LKVPLVIFK	9	Unmodified	_LKVPLVIFK_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2;ENST00000608590.5_1_1:237955470-237994843:+|nuORF;nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000198626|Q92736-2|RYR2;nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000198626|Q92736-2|RYR2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.8574829101562	2	528.862621	1055.71069	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.66	1	114.66	114.16	115.16	0								0	0	0	0.36199	1	11816	11816		7.6903	0	1				29397	8298;8027	19678	19688	33461	33461					0.1850613468989195
LKVPVHHT	8	Unmodified	_LKVPVHHT_					0	0	0		nc|ENSG00000170222|Q3LIE5-3|ADPRM;ENSG00000170222|ENST00000379774|ADPRM	nc|ENSG00000170222|Q3LIE5-3|ADPRM	nc|ENSG00000170222|Q3LIE5-3|ADPRM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7779846191406	2	465.779619	929.544686	-1.4399	-0.00067067	-2.9942	-0.0013946	-4.4341	-0.0020653	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.85277	1	7603	7603		25.45	2.4077	1	287800			29398	6567	19679	19689	33462	33462					0.07709501233898663
LKVPVSIA	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LKVPVSIA_					1	0	0		ENST00000307198.11_1_11:71791796-71791850:+|nuORF	ENST00000307198.11_1_11:71791796-71791850:+|nuORF	ENST00000307198.11_1_11:71791796-71791850:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801818847656	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.91005	1	2481	2481		42.474	8.9589	1	3714500			29399	9870	19680	19690	33463	33463					0.10388447425270897
LKVPVSIA	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LKVPVSIA_					1	0	0		ENST00000307198.11_1_11:71791796-71791850:+|nuORF	ENST00000307198.11_1_11:71791796-71791850:+|nuORF	ENST00000307198.11_1_11:71791796-71791850:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7798767089844	2	434.778754	867.542954	-1.6369	-0.00071169	4.2666	0.001855	2.6297	0.0011433	434.7804825082367	43.238	1.5673	43.244	42.525	44.093	0.0057526					133	41	4	0	0	0	0.91005	1	2926	2926		42.474	10.52	1	2391100			29400	9870	19680	19690	33464	33464					0.10388447425270897
LKVPVSIA	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LKVPVSIA_					1	0	0		ENST00000307198.11_1_11:71791796-71791850:+|nuORF	ENST00000307198.11_1_11:71791796-71791850:+|nuORF	ENST00000307198.11_1_11:71791796-71791850:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.9159	1	2120	2120		44.531	11.015	1	4737100			29401	9870	19680	19690	33465	33465					0.10388447425270897
LKVPVSIA	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LKVPVSIA_					1	0	0		ENST00000307198.11_1_11:71791796-71791850:+|nuORF	ENST00000307198.11_1_11:71791796-71791850:+|nuORF	ENST00000307198.11_1_11:71791796-71791850:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.779541015625	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.9159	1	3614	3614		44.531	11.015	1	1986600			29402	9870	19680	19690	33466	33466					0.10388447425270897
LKVRADKHQL	10	Unmodified	_LKVRADKHQL_					0	0	0			REV__ENSG00000124574|ENST00000372530|ABCC10	REV__ENSG00000124574|ENST00000372530|ABCC10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3651733398438	2	604.367121	1206.71969	1.0495	0.00063426	-2.1403	-0.0012935	-1.0908	-0.00065925	604.3654815369778	107.84	0.75342	107.98	107.32	108.07	0.13866					71	18	5	0	0	0	0.86718	1	11566	11566		27.882	0.83493	1	18755000	+		29403	18595	19681	19691	33467	33467					0.12459876308253115
LKVRPVAL	8	Unmodified	_LKVRPVAL_					0	0	0		nc|ENSG00000096717|Q96EB6-2|SIRT1;ENSG00000096717|ENST00000212015|SIRT1	nc|ENSG00000096717|Q96EB6-2|SIRT1	nc|ENSG00000096717|Q96EB6-2|SIRT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3068542480469	2	448.308013	894.601472	0.077631	3.4803E-05	-2.7409	-0.0012288	-2.6633	-0.001194	448.3066399398086	21.099	1.9391	20.47	19.445	21.384	-0.62835					82	47	2	0	0	0	0.81548	1	730	730		20.482	0	1	244290			29404	1743	19682	19692	33468	33468					0.1499554879039806
LKVRSRLWAH	10	Unmodified	_LKVRSRLWAH_					0	0	0		ENSG00000077943|ENST00000378076|ITGA8	ENSG00000077943|ENST00000378076|ITGA8	ENSG00000077943|ENST00000378076|ITGA8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2279357910156	3	422.591163	1264.75166	-0.5992	-0.00025322	3.7615	0.0015896	3.1623	0.0013364	422.59262472011426	58.695	0.95246	59.087	58.857	59.809	0.39209					31	22	2	0	0	0	0.37624	1	6148	6148		11.636	2.8366	1	125230			29405	1388	19683	19693	33469	33469					0.12987288782096584
LKVRSRLWAH	10	Unmodified	_LKVRSRLWAH_					0	0	0		ENSG00000077943|ENST00000378076|ITGA8	ENSG00000077943|ENST00000378076|ITGA8	ENSG00000077943|ENST00000378076|ITGA8	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	422.591163	1264.75166	-1.8042	-0.00076245	5.3862	0.0022761	3.5819	0.0015137	422.5932950811883	59.075	0.77283	59.162	58.98	59.753	0.087002	0.23635	0.002675	NaN	11.636	44	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123610			29406	1388	19683	19693							0.12987288782096584
LKVSFKHV	8	Unmodified	_LKVSFKHV_					0	0	0			REV__ENSG00000128536|ENST00000317716|CDHR3	REV__ENSG00000128536|ENST00000317716|CDHR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2977600097656	2	479.297645	956.580737	-0.25174	-0.00012066	0.42964	0.00020592	0.1779	8.5265E-05	479.2977080659384	57.467	1.4488	58.023	57.642	59.091	0.55512					79	35	4	0	0	0	0.93293	2	5983	5983;5995		51.335	3.4199	1	5116300	+		29407	18778	19684	19694	33470;33471	33470					0.10070958410756248
LKVTKKKST	9	Unmodified	_LKVTKKKST_					0	0	0		ENSG00000164066|ENST00000335251|INTU;nc|ENSG00000164066|Q9ULD6-4|INTU;ENST00000503952.5_1_4:128606686-128637588:+|nuORF	ENSG00000164066|ENST00000335251|INTU	ENSG00000164066|ENST00000335251|INTU	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3137817382812	2	516.842416	1031.67028	0.90144	0.0004659	-2.2811	-0.001179	-1.3797	-0.00071309	516.8416703539895	99.466	0.20868	99.514	99.381	99.59	0.047523					7	4	2	0	0	0	0.20789	1	10648	10648		13.454	5.2227	1	46616			29408	5908	19685	19695	33472	33472					0.15571168299470628
LKVVIWAK	8	Unmodified	_LKVVIWAK_					0	0	0		L1M4_dup6020|chr5:141114522-141116487:+|3.0372164577870437|0.2312685431788466|3.72|63.0|58|3|sense	L1M4_dup6020|chr5:141114522-141116487:+|3.0372164577870437|0.2312685431788466|3.72|63.0|58|3|sense	L1M4_dup6020|chr5:141114522-141116487:+|3.0372164577870437|0.2312685431788466|3.72|63.0|58|3|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9730529785156	2	478.818213	955.621873	-0.90269	-0.00043223	3.985	0.0019081	3.0823	0.0014758	478.8206744044325	50.954	0.15563	50.989	50.891	51.047	0.034588					9	6	2	0	0	0	0.4196	1	4020	4020		3.6843	0	1	78098			29409	14521	19686	19696	33473	33473					0.14228719450204608
LKVVLLLPP	9	Unmodified	_LKVVLLLPP_					0	0	0			REV__ENST00000430375.1_1_3:190946511-190947557:-|nuORF	REV__ENST00000430375.1_1_3:190946511-190947557:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.26751708984375	2	496.349346	990.684139	-0.40708	-0.00020206	-2.3922	-0.0011874	-2.7993	-0.0013894	496.34798538092997	52.946	2.0326	53.561	52.787	54.82	0.61436					68	48	2	0	0	0	0.20789	1	5323	5323		25.45	7.1258	1	117270	+		29410	26601	19687	19697	33474	33474					0.18842445798554763
LKVVRFVSD	9	Unmodified	_LKVVRFVSD_					0	0	0		ENST00000607532.5_1_6:13307806-13327130:-|nuORF;nc|ENSG00000145979|Q9P0N9-4|TBC1D7;ENSG00000145979|ENST00000379300|TBC1D7;nc|ENSG00000145979|Q9P0N9-3|TBC1D7;nc|ENSG00000145979|Q9P0N9-2|TBC1D7	ENST00000607532.5_1_6:13307806-13327130:-|nuORF	ENST00000607532.5_1_6:13307806-13327130:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8204956054688	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.76255	1	8328	8328		35.618	3.6634	1	1159800			29411	4808	19688	19698	33475	33475					0.09498308748334239
LKWHIKKRPQ	10	Unmodified	_LKWHIKKRPQ_					0	0	0			REV__ENST00000262375.10_1_16:4504911-4505835:+|nuORF	REV__ENST00000262375.10_1_16:4504911-4505835:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	445.6358947753906	3	445.278696	1332.81426	-1.8881	-0.00084071	1.2641	0.00056288	-0.62397	-0.00027784	445.2777623145025	39.563	0.12709	39.563	39.499	39.626	0					4	2	2	0	0	0	0.37624	1	2543	2543		9.6461	0	1	21820	+		29412	24417	19689	19699	33476	33476					0.16116434850255246
LKWLAPER	8	Unmodified	_LKWLAPER_					0	0	0		ENSG00000060140|ENST00000075503|STYK1	ENSG00000060140|ENST00000075503|STYK1	ENSG00000060140|ENST00000075503|STYK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7991943359375	2	506.800552	1011.58655	0.018043	9.144E-06	1.4105	0.00071482	1.4285	0.00072396	506.80125221893354	53.037	1.9797	53.034	52.291	54.271	-0.0033035					105	54	3	0	0	0	0.8621	1	4615	4615		26.693	2.4902	1	173240			29413	1061	19690	19700	33477	33477					0.08122056922411502
LKWLHKST	8	Unmodified	_LKWLHKST_					0	0	0		ENSG00000136542|ENST00000259056|GALNT5	ENSG00000136542|ENST00000259056|GALNT5	ENSG00000136542|ENST00000259056|GALNT5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.2922058105469	2	506.800552	1011.58655	-0.4881	-0.00024737	1.8805	0.00095303	1.3924	0.00070566	506.80143835017117	52.987	1.0446	52.963	52.195	53.239	-0.023849					45	25	2	0	0	0	0.4196	1	4734	4734		16.473	0	1	147470			29414	4119	19691	19701	33478	33478					0.08122056922411502
LKWLSRVYKDK	11	Unmodified	_LKWLSRVYKDK_					0	0	0			REV__nc|ENSG00000182511|P07332-2|FES	REV__nc|ENSG00000182511|P07332-2|FES	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.80743408203125	3	479.285516	1434.83472	0.2262	0.00010841	-3.7341	-0.0017897	-3.5079	-0.0016813	479.28535502839907	39.098	0.18639	39.186	39.034	39.22	0.088375					5	4	2	0	0	0	0.17733	1	2371	2371		27.554	14.046	1	28848	+		29415	22529	19692	19702	33479	33479					0.1346956071938621
LKWRLRLIHK	10	Unmodified	_LKWRLRLIHK_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.7841796875	3	454.966341	1361.87719	-1.0586	-0.00048164	1.368	0.00062239	0.30936	0.00014075	454.9669862677441	43.739	0.45458	43.704	43.535	43.99	-0.034824					12	10	2	0	0	0	0.37624	1	3450	3450		10.104	2.7042	1	61636	+		29416	20207	19693	19703	33480	33480					0.2107300063828461
LKWRLRLIHK	10	Unmodified	_LKWRLRLIHK_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.96600341796875	3	454.966341	1361.87719	-0.85763	-0.00039019	1.9916	0.00090613	1.134	0.00051594	454.96706899495365	41.367	1.3426	41.373	40.948	42.29	0.0065727					90	33	4	0	0	0	0.91645	1	3056	3056		6.6596	0.65857	1	458770	+		29417	20207	19693	19703	33481	33481					0.2107300063828461
LKWRLRLIHK	10	Unmodified	_LKWRLRLIHK_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.7845764160156	3	454.966341	1361.87719	-0.58698	-0.00026706	2.2411	0.0010196	1.6541	0.00075258	454.9672148490575	42.876	1.9751	42.876	42.115	44.09	0.00016785					100	47	3	0	0	0	0.37624	1	3389	3389		10.587	7.1781	1	267240	+		29418	20207	19693	19703	33482	33482					0.2107300063828461
LKWRLRLIHK	10	Unmodified	_LKWRLRLIHK_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	454.966341	1361.87719	-1.8358	-0.00083523	3.9005	0.0017746	2.0647	0.00093935	454.967978231376	42.535	1.6597	42.535	41.683	43.343	0	-0.17797	0.0016242	NaN	6.6596	99	40	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	263100	+		29419	20207	19693	19703							0.2107300063828461
LKWRLRLIHK	10	Unmodified	_LKWRLRLIHK_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	454.966341	1361.87719	-1.127	-0.00051275	2.8946	0.0013169	1.7676	0.00080418	454.9675584230496	42.797	1.5142	42.761	42.063	43.577	-0.035816	0.04819	0.00025128	NaN	6.6596	98	35	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	283750	+		29420	20207	19693	19703							0.2107300063828461
LKWRLRLIHK	10	Unmodified	_LKWRLRLIHK_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	454.966341	1361.87719	-1.2702	-0.00057789	3.4906	0.0015881	2.2205	0.0010102	454.9677009277351	42.674	1.2365	42.68	42.109	43.345	0.0057487	-0.033148	0.0010649	NaN	6.6596	87	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338390	+		29421	20207	19693	19703							0.2107300063828461
LKWRLRLIHK	10	Unmodified	_LKWRLRLIHK_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	454.966341	1361.87719	0.24521	0.00011156	1.2079	0.00054956	1.4531	0.00066113	455.3007043986456	43.791	0.1641	43.847	43.759	43.923	0.056744	0.071731	-0.00020247	NaN	10.104	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36884	+		29422	20207	19693	19703							0.2107300063828461
LKWRLRLIHK	10	Unmodified	_LKWRLRLIHK_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	454.966341	1361.87719	-0.14787	-6.7278E-05	2.4197	0.0011009	2.2718	0.0010336	454.9673275754236	42.633	1.5221	42.588	41.793	43.315	-0.045467	-0.12508	-0.00039692	NaN	6.6596	90	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	306980	+		29423	20207	19693	19703							0.2107300063828461
LKWTSGRPGCL	11	Unmodified	_LKWTSGRPGCL_					0	0	0		ENST00000431807.6_1_2:197584347-197586267:+|nuORF	ENST00000431807.6_1_2:197584347-197586267:+|nuORF	ENST00000431807.6_1_2:197584347-197586267:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7851867675781	3	406.553497	1216.63866	0.66754	0.00027139	1.8139	0.00073746	2.4815	0.0010088	406.55443592732166	31.904	0.47118	32.03	31.818	32.289	0.12642					18	10	3	0	0	0	0.17396	1	2221	2221		25.892	0	1	47768			29424	11655	19694	19704	33483	33483					0.03900852273886812
LKWTSGRPGCL	11	Unmodified	_LKWTSGRPGCL_					0	0	0		ENST00000431807.6_1_2:197584347-197586267:+|nuORF	ENST00000431807.6_1_2:197584347-197586267:+|nuORF	ENST00000431807.6_1_2:197584347-197586267:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7853088378906	3	406.553497	1216.63866	0.40396	0.00016423	2.3958	0.000974	2.7997	0.0011382	406.55434019232626	31.899	0.38633	32.006	31.76	32.146	0.10707					11	8	2	0	0	0	0.17432	1	2222	2222		47.228	15.593	1	39170			29425	11655	19694	19704	33484	33484					0.03900852273886812
LKYALVGDDS	10	Unmodified	_LKYALVGDDS_					0	0	0			REV__nc|ENSG00000185920|Q13635-2|PTCH1	REV__nc|ENSG00000185920|Q13635-2|PTCH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.824462890625	2	540.782222	1079.54989	-1.6588	-0.00089706	0.68717	0.00037161	-0.97165	-0.00052545	540.7827915823962	39.569	0.56375	40.124	39.79	40.354	0.55449					19	12	2	0	0	0	0.37624	1	3303	3303		31.53	1.6883	1	62283	+		29426	30103	19695	19705	33485	33485					0.013297155152031337
LKYARLPLGRH	11	Unmodified	_LKYARLPLGRH_					0	0	0			REV__nc|ENSG00000132003|Q9H7M6|ZSWIM4	REV__nc|ENSG00000132003|Q9H7M6|ZSWIM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9397277832031	3	441.938451	1322.79352	-0.63554	-0.00028087	3.7441	0.0016547	3.1086	0.0013738	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.76892	1	4668	4668		17.833	0.6664	1	409610	+		29427	18980	19696	19706	33486	33486					0.14503844470573313
LKYFFMSP	8	Unmodified	_LKYFFMSP_					0	0	0		ENST00000596390.1_1_19:7587636-7590109:+|nuORF;ENST00000394321.9_1_19:7587636-7592563:+|nuORF;ENSG00000090674|ENST00000264079|MCOLN1	ENST00000596390.1_1_19:7587636-7590109:+|nuORF	ENST00000596390.1_1_19:7587636-7590109:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.7638549804688	2	516.764789	1031.51502	-0.3384	-0.00017487	-2.682	-0.001386	-3.0204	-0.0015609	516.7626751421075	53.92	1.2988	54.505	54.164	55.463	0.58474					38	30	2	0	0	0	0.4196	1	5449	5449		24.203	0	1	210850			29428	1654	19697	19707	33487	33487					0.0005280117354686809
LKYHLPRV	8	Unmodified	_LKYHLPRV_					0	0	0		ENST00000584601.5_1_17:37844507-37851286:+|nuORF;ENST00000584014.5_1_17:37844516-37851033:+|nuORF	ENST00000584601.5_1_17:37844507-37851286:+|nuORF	ENST00000584601.5_1_17:37844507-37851286:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3150024414062	2	513.316369	1024.61818	0.29738	0.00015265	0.021317	1.0942E-05	0.3187	0.00016359	513.3163353757171	43.153	1.1401	43.209	42.87	44.01	0.056744					71	27	3	0	0	0	0.86791	1	3034	3034		28.254	0	1	375110			29429	14128	19698	19708	33488	33488					0.10686049676360199
LKYLFRFI	8	Unmodified	_LKYLFRFI_					0	0	0		ENSG00000147459|ENST00000276440|DOCK5;ENST00000467709.6_1_8:25191660-25227073:+|nuORF	ENSG00000147459|ENST00000276440|DOCK5	ENSG00000147459|ENST00000276440|DOCK5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.7477416992188	2	550.33677	1098.65899	-1.7088	-0.00094042	-1.7478	-0.00096189	-3.4566	-0.0019023	550.3346269479115	58.507	0.41234	58.899	58.736	59.148	0.39209					10	9	2	0	0	0	0.4196	1	6112	6112		18.324	0	1	81202			29430	4904	19699	19709	33489	33489					0.11360390995969283
LKYVDVVKTV	10	Unmodified	_LKYVDVVKTV_					0	0	0			REV__nc|ENSG00000152582|Q9C093-2|SPEF2	REV__nc|ENSG00000152582|Q9C093-2|SPEF2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533325195312	2	582.355357	1162.69616	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.88	1	117.9	117.4	118.4	0.026466								0	0	0	0.45132	1	12961	12961		22.58	6.1065	1		+		29431	20307	19700	19710	33490	33490					0.12132017751082458
LKYYRLKIL	9	Unmodified	_LKYYRLKIL_					0	0	0		ENST00000371728.7_1_10:91477194-91477239:+|nuORF	ENST00000371728.7_1_10:91477194-91477239:+|nuORF	ENST00000371728.7_1_10:91477194-91477239:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	606.1668701171875	2	605.389534	1208.76451	-1.7803	-0.0010778	1.2529	0.00075848	-0.52747	-0.00031933	605.3901288910691	43.065	0.96804	43.839	43.375	44.343	0.7738					60	23	3	0	0	0	0.20789	1	3935	3935		29.15	6.1071	1	758320			29432	10673	19701	19711	33491	33491					0.16848307121586004
LLAAAKLL	8	Unmodified	_LLAAAKLL_					0	0	0		ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.92388916015625	2	406.783839	811.553125	0.042403	1.7249E-05	3.358	0.001366	3.4004	0.0013832	406.7851612095636	39.167	0.89156	39.535	39.006	39.897	0.36755					31	20	2	0	0	0	0.4196	1	3311	3311		10.185	0.71421	1	60243			29433	6723	19702	19712	33492	33492					0.13981055150509292
LLAAALLYAA	10	Unmodified	_LLAAALLYAA_					0	0	0		ENSG00000157445|ENST00000474759|CACNA2D3	ENSG00000157445|ENST00000474759|CACNA2D3	ENSG00000157445|ENST00000474759|CACNA2D3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.30499267578125	2	495.305136	988.595718	-0.66585	-0.0003298	0.93457	0.0004629	0.26872	0.0001331	495.3054548955284	64.721	0.78749	65.107	64.732	65.519	0.38615					39	18	3	0	0	0	0.70264	1	7023	7023		44.531	0	1	274140			29434	5430	19703	19713	33493	33493					0.10096405488081928
LLAAARPM	8	Unmodified	_LLAAARPM_					0	0	0		ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75128173828125	2	421.749473	841.484393	2.0737	0.00087458	2.8713	0.001211	4.945	0.0020855	421.75059831811666	74.567	1.1366	74.612	73.884	75.021	0.04509					66	40	2	0	0	0	0.87276	1	7191	7191		29.842	1.5873	1	116630			29435	2738	19704	19714	33494	33494					0.057310675791541144
LLAAILAK	8	Unmodified	_LLAAILAK_					0	0	0			REV__ENSG00000113905|ENST00000232003|HRG	REV__ENSG00000113905|ENST00000232003|HRG	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852783203125	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.397	1	33.507	33.007	34.007	0.10991								0	0	0	0.29319	1	1626	1626		31.579	0	1		+		29436	18021	19705	19715	33495	33495					0.13981055150509292
LLAALCLR	8	Unmodified	_LLAALCLR_					0	0	0		nc|ENSG00000128805|Q7Z5H3-4|ARHGAP22	nc|ENSG00000128805|Q7Z5H3-4|ARHGAP22	nc|ENSG00000128805|Q7Z5H3-4|ARHGAP22	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7754211425781	2	436.772948	871.531344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.827	1	26.868	26.368	27.368	0.040834								0	0	0	0.29353	1	1165	1165		28.254	1.4582	1				29437	14899	19706	19716	33496	33496					0.09043927130301199
LLAALNIATH	10	Unmodified	_LLAALNIATH_					0	0	0		ENST00000466371.5_1_X:48339567-48341236:+|nuORF;nc|ENSG00000068438|Q9UET6-2|FTSJ1;ENSG00000068438|ENST00000348411|FTSJ1	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8104248046875	2	518.811116	1035.60768	0.73706	0.0003824	-2.3017	-0.0011942	-1.5647	-0.00081176	518.8098800745994	96.38	1.5271	96.785	95.769	97.296	0.40451					65	36	2	0	0	0	0.4094	1	11604	11604		63.306	7.8021	1	2354000			29438	1199	19707	19717	33497	33497					0.09130022231283874
LLAALNIATH	10	Unmodified	_LLAALNIATH_					0	0	0		ENST00000466371.5_1_X:48339567-48341236:+|nuORF;nc|ENSG00000068438|Q9UET6-2|FTSJ1;ENSG00000068438|ENST00000348411|FTSJ1	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	518.811116	1035.60768	-0.045097	-2.3397E-05	-1.3583	-0.00070471	-1.4034	-0.00072811	518.8103223435595	96.983	0.73346	97.046	96.651	97.385	0.062225	0.15585	0.001018	NaN	63.306	30	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	205040			29439	1199	19707	19717							0.09130022231283874
LLAALNIATH	10	Unmodified	_LLAALNIATH_					0	0	0		ENST00000466371.5_1_X:48339567-48341236:+|nuORF;nc|ENSG00000068438|Q9UET6-2|FTSJ1;ENSG00000068438|ENST00000348411|FTSJ1	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	518.811116	1035.60768	2.5294	0.0013123	-3.962	-0.0020555	-1.4326	-0.00074327	518.8089497688346	96.981	0.85893	96.924	96.37	97.229	-0.056381	0.034543	-0.0016837	NaN	63.306	32	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199200			29440	1199	19707	19717							0.09130022231283874
LLAALNIATH	10	Unmodified	_LLAALNIATH_					0	0	0		ENST00000466371.5_1_X:48339567-48341236:+|nuORF;nc|ENSG00000068438|Q9UET6-2|FTSJ1;ENSG00000068438|ENST00000348411|FTSJ1	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	518.811116	1035.60768	1.0645	0.00055226	-2.5301	-0.0013126	-1.4656	-0.00076038	518.8097031727444	96.757	0.80956	96.804	96.441	97.25	0.047798	-0.085229	-0.00019789	NaN	63.306	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197860			29441	1199	19707	19717							0.09130022231283874
LLAALVDLV	9	Unmodified	_LLAALVDLV_					0	0	0			REV__ENSG00000135763|ENST00000258243|URB2	REV__ENSG00000135763|ENST00000258243|URB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8001403808594	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3061	3061		25.45	3.4903	1	942760	+		29442	19246	19708	19718	33498	33498					0.119050031137931
LLAAPKLL	8	Unmodified	_LLAAPKLL_					0	0	0			REV__ENSG00000185038|ENST00000389758|MROH2A	REV__ENSG00000185038|ENST00000389758|MROH2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7911376953125	2	419.791664	837.568775	-0.12961	-5.441E-05	0.064211	2.6955E-05	-0.065401	-2.7455E-05	419.79162418904525	53.267	0.58028	53.881	53.572	54.152	0.61436					24	13	2	0	0	0	0.94132	1	5380	5380		54.765	12.29	1	330530	+		29443	22732	19709	19719	33499	33499					0.14349341667571025
LLAAPKLL	8	Unmodified	_LLAAPKLL_					0	0	0			REV__ENSG00000185038|ENST00000389758|MROH2A	REV__ENSG00000185038|ENST00000389758|MROH2A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	419.791664	837.568775	0.63929	0.00026837	-0.64712	-0.00027166	-0.0078327	-3.2881E-06	419.7912230144005	53.42	0.57856	53.834	53.581	54.16	0.4139	-0.023929	-0.00033002	NaN	54.765	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197750	+		29444	22732	19709	19719							0.14349341667571025
LLAAPKLL	8	Unmodified	_LLAAPKLL_					0	0	0			REV__ENSG00000185038|ENST00000389758|MROH2A	REV__ENSG00000185038|ENST00000389758|MROH2A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	419.791664	837.568775	-0.12961	-5.441E-05	0.064211	2.6955E-05	-0.065401	-2.7455E-05	419.79162418904525	53.267	0.58028	53.881	53.572	54.152	0.61436	0.023929	0.0002672	NaN	54.765	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	330530	+		29445	22732	19709	19719							0.14349341667571025
LLAAQMALL	9	Unmodified	_LLAAQMALL_					0	0	0			REV__ENSG00000134899|ENST00000652225|ERCC5	REV__ENSG00000134899|ENST00000652225|ERCC5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2908935546875	2	472.285889	942.557224	2.1484	0.0010146	2.0198	0.00095391	4.1681	0.0019686	472.28673091824714	113.99	1.2395	114.01	113.14	114.38	0.020027					83	56	2	0	0	0	0.7932	1	13707	13707		20.482	1.1219	1	98727	+		29446	19175	19710	19720	33500	33500					0.08364776581913702
LLAARSPGM	9	Oxidation (M)	_LLAARSPGM(Oxidation (M))_		LLAARSPGM(1)		LLAARSPGM(46)	0	0	1		ENST00000321264.8_1_2:242707521-242708037:+|nuORF	ENST00000321264.8_1_2:242707521-242708037:+|nuORF	ENST00000321264.8_1_2:242707521-242708037:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.2531433105469	2	466.25512	930.495686	0.44995	0.00020979	-3.0475	-0.0014209	-2.5975	-0.0012111	466.2536160452955	65.416	0.92493	65.542	64.686	65.611	0.12532					51	40	2	0	0	0	0.6204	1	5803	5803		45.972	15.655	1	242650			29447	10037	19711	19721	33501	33501		169			0.02765844882651436
LLAARSPGM	9	Oxidation (M)	_LLAARSPGM(Oxidation (M))_					0	0	1		ENST00000321264.8_1_2:242707521-242708037:+|nuORF	ENST00000321264.8_1_2:242707521-242708037:+|nuORF	ENST00000321264.8_1_2:242707521-242708037:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	466.25512	930.495686	-1.1757	-0.0005482	-1.5235	-0.00071033	-2.6992	-0.0012585	466.2543991016111	65.399	1.0395	65.426	64.51	65.549	0.027321	-0.1379	0.0004275	NaN	45.972	47	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	195200			29448	10037	19711	19721				169			0.02765844882651436
LLAARSPGM	9	Oxidation (M)	_LLAARSPGM(Oxidation (M))_					0	0	1		ENST00000321264.8_1_2:242707521-242708037:+|nuORF	ENST00000321264.8_1_2:242707521-242708037:+|nuORF	ENST00000321264.8_1_2:242707521-242708037:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	466.25512	930.495686	-0.9243	-0.00043096	-1.5269	-0.00071192	-2.4512	-0.0011429	466.2543444233994	65.523	0.35432	65.562	65.305	65.659	0.038544	-0.0022851	0.00042433	NaN	45.972	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	203910			29449	10037	19711	19721				169			0.02765844882651436
LLAARTKVIH	10	Unmodified	_LLAARTKVIH_					0	0	0		nc|ENSG00000132437|P20711-2|DDC;nc|ENSG00000132437|P20711-3|DDC;ENSG00000132437|ENST00000444124|DDC	nc|ENSG00000132437|P20711-2|DDC	nc|ENSG00000132437|P20711-2|DDC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	561.3606567382812	2	561.361308	1120.70806	0.078634	4.4142E-05	4.437	0.0024908	4.5156	0.0025349	561.3635150003997	46.064	0.90353	45.985	45.457	46.361	-0.079006					58	25	3	0	0	0	0.8651	1	3319	3319		25.574	3.6142	1	158090			29450	3795	19712	19722	33502	33502					0.15253679284933241
LLAARWLFPQ	10	Unmodified	_LLAARWLFPQ_					0	0	0			REV__ENST00000563918.5_1_16:67210716-67213197:-|nuORF	REV__ENST00000563918.5_1_16:67210716-67213197:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.24151611328125	3	405.572998	1213.69716	3.069	0.0012447	1.0665	0.00043256	4.1356	0.0016773	405.5733195790618	103.38	0.21246	103.65	103.46	103.67	0.26524					7	4	2	0	0	0	0.37624	1	12607	12607		33.922	13.084	1	656930	+		29451	23093	19713	19723	33503	33503					0.09886276910651759
LLAASLFV	8	Unmodified	_LLAASLFV_					0	0	0		ENST00000395532.8_2_16:28875532-28877416:+|nuORF;ENST00000337120.9_2_16:28877140-28877416:+|nuORF;ENST00000563591.5_1_16:28858025-28877416:+|nuORF	ENST00000395532.8_2_16:28875532-28877416:+|nuORF	ENST00000395532.8_2_16:28875532-28877416:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2583312988281	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.81548	1	572	572		20.482	0.48506	1	679020			29452	10183	19714	19724	33504	33504					0.08288775879520927
LLAAVAPAR	9	Unmodified	_LLAAVAPAR_					0	0	0		ENSG00000136770|ENST00000376980|DNAJC1;ENST00000447548.5_3_10:22208848-22292309:-|nuORF	ENSG00000136770|ENST00000376980|DNAJC1	ENSG00000136770|ENST00000376980|DNAJC1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.2804260253906	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.563	1	40.563	40.063	41.063	0								0	0	0	0.28877	1	2678	2678		35.201	8.4046	1				29453	4136	19715	19725	33505	33505					0.10438385376653514
LLACIARI	8	Unmodified	_LLACIARI_					0	0	0			REV__nc|ENSG00000236320|P0C7P3-2|SLFN14	REV__nc|ENSG00000236320|P0C7P3-2|SLFN14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7728271484375	2	436.772948	871.531344	0.36031	0.00015737	1.5614	0.00068196	1.9217	0.00083933	436.77349327524536	26.738	0.89724	26.766	26.451	27.349	0.028172					66	41	2	0	0	0	0.80963	1	1021	1021		15.636	0	1	200440	+		29454	23789	19716	19726	33506	33506					0.0904392713028983
LLADDILSS	9	Unmodified	_LLADDILSS_					0	0	0		ENSG00000170396|ENST00000302277|ZNF804A	ENSG00000170396|ENST00000302277|ZNF804A	ENSG00000170396|ENST00000302277|ZNF804A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.7560729980469	2	473.758215	945.501877	-0.17861	-8.4617E-05	2.4107	0.0011421	2.2321	0.0010575	473.75887900896925	45.239	0.50108	45.171	44.855	45.356	-0.068634					16	11	2	0	0	0	0.77546	1	3221	3221		31.955	1.4512	1	101740			29455	6584	19717	19727	33507	33507					0.026946415951556446
LLADELITV	9	Unmodified	_LLADELITV_					0	0	0		ENST00000479237.5_1_9:131770965-131773053:-|nuORF;ENST00000461811.5_1_9:131770965-131772716:-|nuORF;ENSG00000148341|ENST00000372564|SH3GLB2;nc|ENSG00000148341|Q9NR46-2|SH3GLB2	ENST00000479237.5_1_9:131770965-131773053:-|nuORF	ENST00000479237.5_1_9:131770965-131773053:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.7917785644531	2	493.792058	985.569563	0.75109	0.00037088	-0.77615	-0.00038326	-0.025059	-1.2374E-05	493.7915393325102	91.749	1.815	92.199	91.714	93.529	0.44958					108	42	4	0	0	0	0.43338	1	10921	10921		55.504	7.5886	1	2387900			29456	4952	19718	19728	33508	33508					0.07620091525950556
LLADKLLP	8	Unmodified	_LLADKLLP_					0	0	0			REV__nc|ENSG00000122787|P51857-3|AKR1D1	REV__nc|ENSG00000122787|P51857-3|AKR1D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7877502441406	2	441.786579	881.558604	-1.4973	-0.00066148	4.3629	0.0019275	2.8656	0.001266	441.788391738542	44.7	2.6432	44.712	43.395	46.038	0.012058					134	65	3	0	0	0	0.86288	1	3158	3158		26.796	7.4361	1	555340	+		29457	18517	19719	19729	33509	33509					0.11308733942325944
LLADLMKAL	9	Unmodified	_LLADLMKAL_					0	0	0			REV__nc|ENSG00000197653|Q8IVF4|DNAH10	REV__nc|ENSG00000197653|Q8IVF4|DNAH10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.30096435546875	2	494.298996	986.583439	-0.82421	-0.00040741	4.4506	0.0021999	3.6264	0.0017925	494.3011394049625	97.613	4.008	97.613	96.986	100.99	0					359	95	6	0	0	0	0.74721	1	10020	10020		37.159	1.5408	1	29815000	+		29458	23257	19720	19730	33510	33510					0.08961045753392227
LLADLMKAL	9	Unmodified	_LLADLMKAL_					0	0	0			REV__nc|ENSG00000197653|Q8IVF4|DNAH10	REV__nc|ENSG00000197653|Q8IVF4|DNAH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3009338378906	2	494.298996	986.583439	2.3073	0.0011405	1.1641	0.0005754	3.4713	0.0017159	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.76255	1	10606	10606		35.618	1.4457	1	53958000	+		29459	23257	19720	19730	33511	33511					0.08961045753392227
LLADPLDLL	9	Unmodified	_LLADPLDLL_					0	0	0			REV__ENSG00000084092|ENST00000264230|NOA1	REV__ENSG00000084092|ENST00000264230|NOA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79534912109375	2	491.794601	981.574648	-2.3785	-0.0011697	3.3433	0.0016442	0.96479	0.00047448	491.79615834302405	43.462	1.3116	43.459	43.021	44.333	-0.0024452					60	31	3	0	0	0	0.58151	1	3347	3347		47.916	1.9636	1	272230	+		29460	16867	19721	19731	33512	33512					0.08312395388577443
LLADPLDLL	9	Unmodified	_LLADPLDLL_					0	0	0			REV__ENSG00000084092|ENST00000264230|NOA1	REV__ENSG00000084092|ENST00000264230|NOA1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	491.794601	981.574648	-0.99617	-0.00048991	2.0066	0.00098685	1.0105	0.00049694	491.7955324242566	43.442	1.556	43.406	42.885	44.441	-0.035816	0.033962	-0.00014419	NaN	47.916	74	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171190	+		29461	16867	19721	19731							0.08312395388577443
LLAEIVIPGT	10	Unmodified	_LLAEIVIPGT_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3187866210938	2	513.3157	1024.61685	-1.4711	-0.00075512	3.5902	0.0018429	2.1191	0.0010878	513.3174116406972	46.45	1.1988	46.45	46.135	47.334	0					64	33	3	0	0	0	0.86218	1	3579	3579		32.812	2.3088	1	153170	+		29462	20437;29946	19722	19732	33513	33513					0.10552370796949617
LLAEIVIPGT	10	Unmodified	_LLAEIVIPGT_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3159790039062	2	513.3157	1024.61685	-0.78904	-0.00040502	2.024	0.0010389	1.2349	0.00063391	513.316563461299	43.382	2.0824	43.347	42.842	44.924	-0.035816					87	48	3	0	0	0	0.84112	2	3403	3380;3403		37.159	6.6555	1	377070	+		29463	20437;29946	19722	19732	33514;33515	33515					0.10552370796949617
LLAEIVIPGT	10	Unmodified	_LLAEIVIPGT_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.31689453125	2	513.3157	1024.61685	-0.86606	-0.00044456	1.9618	0.001007	1.0958	0.00056247	513.3165332025184	43.367	1.6866	43.367	42.894	44.58	0.00016785					82	40	3	0	0	0	0.84112	1	3328	3328		37.159	14.117	1	411860	+		29464	20437;29946	19722	19732	33516	33516					0.10552370796949617
LLAEIVIPGT	10	Unmodified	_LLAEIVIPGT_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.317138671875	2	513.3157	1024.61685	0.29738	0.00015265	1.324	0.00067964	1.6214	0.00083229	513.3163353757171	43.153	1.1401	43.209	42.87	44.01	0.056744					71	27	3	0	0	0	0.85939	1	2952	2952		23.042	2.0956	1	375110	+		29465	20437;29946	19722	19732	33517	33517					0.10552370796949617
LLAEIVIPGT	10	Unmodified	_LLAEIVIPGT_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.3164672851562	2	513.3157	1024.61685	-1.3213	-0.00067824	2.9844	0.001532	1.6631	0.00085372	513.3170421973575	41.563	0.75494	42.197	41.952	42.707	0.6339					58	19	4	0	0	0	0.84112	2	3681	3670;3681		37.159	6.6555	1	2273900	+		29466	20437;29946	19722	19732	33518;33519	33519					0.10552370796949617
LLAEIVIPGT	10	Unmodified	_LLAEIVIPGT_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.6229248046875	2	513.3157	1024.61685	-1.3213	-0.00067824	2.9844	0.001532	1.6631	0.00085372	513.3170421973575	41.563	0.75494	42.197	41.952	42.707	0.6339					58	19	4	0	0	0	0.37624	1	3646	3646		37.159	5.2042	1	2273900	+		29467	20437;29946	19722	19732	33520	33520					0.10552370796949617
LLAEKLKDD	9	Unmodified	_LLAEKLKDD_					0	0	0		ENSG00000120658|ENST00000690772|ENOX1;nc|ENSG00000120658|Q8TC92-2|ENOX1	ENSG00000120658|ENST00000690772|ENOX1	ENSG00000120658|ENST00000690772|ENOX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7714233398438	2	522.800414	1043.58628	-0.34329	-0.00017947	-1.0066	-0.00052627	-1.3499	-0.00070575	523.3010354726947	60.561	0.53378	60.95	60.722	61.256	0.38945					22	14	2	0	0	0	0.20789	1	6396	6396		23.042	0	1	413240			29468	3140	19723	19733	33521	33521					0.06622592411895312
LLAELVED	8	Unmodified	_LLAELVED_					0	0	0			REV__ENST00000553883.1_1_14:94401004-94406176:-|nuORF	REV__ENST00000553883.1_1_14:94401004-94406176:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.2490234375	2	451.247483	900.480414	-0.14168	-6.3933E-05	3.2522	0.0014675	3.1105	0.0014036	451.2488328539834	65.707	0.84668	65.718	65.246	66.093	0.010452					75	44	3	0	0	0	0.86791	1	6170	6170		28.254	1.4582	1	804770	+		29469	17209	19724	19734	33522	33522					0.026192565664246104
LLAESRVR	8	Unmodified	_LLAESRVR_					0	0	0			REV__ENSG00000181965|ENST00000314744|NEUROG1	REV__ENSG00000181965|ENST00000314744|NEUROG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2874755859375	2	472.287808	942.561064	-0.108	-5.1006E-05	-0.19809	-9.3555E-05	-0.30609	-0.00014456	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.86288	1	10392	10392		26.796	0	1	46909000	+		29470	22492	19725	19735	33523	33523					0.0874858239999412
LLAETPVPLLL	11	Unmodified	_LLAETPVPLLL_					0	0	0		ENST00000262462.8_1_5:128301784-128301916:+|nuORF	ENST00000262462.8_1_5:128301784-128301916:+|nuORF	ENST00000262462.8_1_5:128301784-128301916:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.2635498046875	2	589.873382	1177.73221	0.083264	4.9115E-05	-3.0537	-0.0018013	-2.9704	-0.0017522	589.87138328252	81.942	0.87302	82.442	82.072	82.945	0.49966					43	21	3	0	0	0	0.17431	1	9552	9552		24.519	0	1	615490			29471	9441	19726	19736	33524	33524					0.15045474927956093
LLAFAKLFV	9	Unmodified	_LLAFAKLFV_					0	0	0			REV__ENST00000599145.1_1_19:58928113-58929148:+|nuORF	REV__ENST00000599145.1_1_19:58928113-58929148:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.32720947265625	2	511.325871	1020.63719	-0.052166	-2.6674E-05	2.488	0.0012722	2.4358	0.0012455	511.3270422766062	97.471	2.3305	97.527	97.032	99.363	0.056839					141	53	4	0	0	0	0.7932	1	10344	10344		25.45	10.786	1	1704400	+		29472	21752	19727	19737	33525	33525					0.12769586247418374
LLAFHVRRAGR	11	Unmodified	_LLAFHVRRAGR_					0	0	0			REV__ENSG00000162817|ENST00000294889|C1orf115	REV__ENSG00000162817|ENST00000294889|C1orf115	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3951416015625	2	648.394005	1294.77346	-1.1411	-0.00073988	-1.4026	-0.00090944	-2.5437	-0.0016493	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.78309	1	12530	12530		14.865	0.72775	1	2297700	+		29473	20851	19728	19738	33526	33526					0.13786093530620747
LLAFLGLISN	10	Unmodified	_LLAFLGLISN_					0	0	0			REV__ENSG00000176925|ENST00000322110|OR51F2	REV__ENSG00000176925|ENST00000322110|OR51F2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8209838867188	2	530.823692	1059.63283	-0.07706	-4.0905E-05	-3.7072	-0.0019679	-3.7842	-0.0020088	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.86589	1	7671	7671		29.15	1.2673	1	1032800	+		29474	22159	19729	19739	33527	33527					0.10540077033874695
LLAFSVSA	8	Unmodified	_LLAFSVSA_					0	0	0		ENST00000489581.1_1_22:22326749-22330123:-|nuORF	REV__chr1:153634343-153638295|30|10.2|0.58|4.14|+|2|CHTOP,CHTOP|1	REV__chr1:153634343-153638295|30|10.2|0.58|4.14|+|2|CHTOP,CHTOP|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.23260498046875	2	404.234179	806.453805	0.43422	0.00017553	-4.189	-0.0016933	-3.7548	-0.0015178	404.23227284804017	82.369	2.9306	82.306	80.531	83.461	-0.062943					114	68	3	0	0	0	0.884	1	8334	8334		33.516	5.2613	1	438470			29475	12654	19730	19740	33528	33528					0.04283612465758324
LLAFYASTIV	10	Unmodified	_LLAFYASTIV_					0	0	0		ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.3176879882812	2	549.3157	1096.61685	1.2725	0.00069901	2.3031	0.0012651	3.5756	0.0019641	549.3168832768056	100.86	2.4507	100.91	100.43	102.88	0.046356					139	58	4	0	0	0	0.86482	1	10891	10891		25.45	0.93098	1	1880500			29476	3059	19731	19741	33529	33529					0.07240370796921525
LLAGAAALVL	10	Unmodified	_LLAGAAALVL_					0	0	0			REV__ENSG00000155957|ENST00000358230|TMBIM4	REV__ENSG00000155957|ENST00000358230|TMBIM4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.7842712402344	2	456.299853	910.585153	-1.8641	-0.00085061	2.4313	0.0011094	0.56714	0.00025878	456.30079093425695	43.037	1.8163	43.811	42.686	44.502	0.7738					100	44	3	0	0	0	0.37624	1	3719	3719		26.796	16.611	1	1078300	+		29477	20455	19732	19742	33530	33530					0.12628422833631703
LLAGAVPVV	9	Unmodified	_LLAGAVPVV_					0	0	0		ENSG00000196371|ENST00000358752|FUT4;nc|ENSG00000196371|P22083-2|FUT4	ENSG00000196371|ENST00000358752|FUT4	ENSG00000196371|ENST00000358752|FUT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2756652832031	2	419.773471	837.53239	2.1505	0.00090274	1.8895	0.00079317	4.0401	0.0016959	419.7740299078456	46.251	0.82218	46.247	45.663	46.485	-0.0041618					28	19	2	0	0	0	0.7932	1	3709	3709		14.664	0	1	69786			29478	8046	19733	19743	33531	33531					0.10712464770847419
LLAGAYFNI	9	Unmodified	_LLAGAYFNI_					0	0	0			REV__nc|ENSG00000186810|P49682-3|CXCR3	REV__nc|ENSG00000186810|P49682-3|CXCR3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.74920654296875	2	491.273835	980.533118	-0.10264	-5.0423E-05	1.6603	0.00081567	1.5577	0.00076525	491.2765704542989	81.817	0.34941	82.316	82.188	82.537	0.49967					13	8	3	0	0	0	0.20789	1	9473	9473		24.203	0	1	93770	+		29479	22880	19734	19744	33532	33532					0.04207259419899856
LLAGAYFNI	9	Unmodified	_LLAGAYFNI_					0	0	0			REV__nc|ENSG00000186810|P49682-3|CXCR3	REV__nc|ENSG00000186810|P49682-3|CXCR3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	491.273835	980.533118	-0.080649	-3.9621E-05	11.45	0.005625	11.369	0.0055854	491.280150770429	82.088	0.61362	82.154	81.694	82.308	0.06591	0.078532	0.0041198	NaN	24.203	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63371	+		29480	22880	19734	19744							0.04207259419899856
LLAGAYFNI	9	Unmodified	_LLAGAYFNI_					0	0	0			REV__nc|ENSG00000186810|P49682-3|CXCR3	REV__nc|ENSG00000186810|P49682-3|CXCR3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	491.273835	980.533118	0.52749	0.00025914	7.0459	0.0034614	7.5733	0.0037206	491.27723925136587	82.107	1.3299	82.044	81.262	82.591	-0.062935	-0.030923	-0.00020741	NaN	24.203	64	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64379	+		29481	22880	19734	19744							0.04207259419899856
LLAGGAILAL	10	Unmodified	_LLAGGAILAL_					0	0	0		nc|ENSG00000149452|Q8TCC7-3|SLC22A8;nc|ENSG00000149452|Q8TCC7-5|SLC22A8;nc|ENSG00000149452|Q8TCC7-4|SLC22A8;ENSG00000149452|ENST00000336232|SLC22A8;nc|ENSG00000149452|Q8TCC7-2|SLC22A8	nc|ENSG00000149452|Q8TCC7-3|SLC22A8	nc|ENSG00000149452|Q8TCC7-3|SLC22A8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3005676269531	2	456.299853	910.585153	-0.85173	-0.00038864	0.76704	0.00035	-0.084692	-3.8645E-05	456.30009221877316	52.472	1.4857	52.896	52.517	54.003	0.42348					62	35	3	0	0	0	0.17933	1	5293	5293		90.939	12.995	1	2903100			29482	5027	19735	19745	33533	33533					0.1262842283365444
LLAGHLRLIKT	11	Unmodified	_LLAGHLRLIKT_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2374572753906	3	412.271319	1233.79213	2.2759	0.00093829	1.5765	0.00064995	3.8524	0.0015882	412.2719245154381	75.32	0.17494	75.366	75.279	75.454	0.04644					8	4	2	0	0	0	0.17863	1	7315	7315		3.2113	0	1	28244			29483	5684	19736	19746	33534	33534					0.18458210381822937
LLAGLPSLV	9	Unmodified	_LLAGLPSLV_					0	0	0		ENSG00000170128|ENST00000304244|GPR25	ENSG00000170128|ENST00000304244|GPR25	ENSG00000170128|ENST00000304244|GPR25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879638671875	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.7932	1	2682	2682		25.45	0	1	14534000			29484	6561	19737	19747	33535	33535					0.11308733942337312
LLAGLPSLV	9	Unmodified	_LLAGLPSLV_					0	0	0		ENSG00000170128|ENST00000304244|GPR25	ENSG00000170128|ENST00000304244|GPR25	ENSG00000170128|ENST00000304244|GPR25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7880554199219	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	2	2331	2331;2363		26.796	1.0356	1	11532000			29485	6561	19737	19747	33536;33537	33536					0.11308733942337312
LLAGLPSLV	9	Unmodified	_LLAGLPSLV_					0	0	0		ENSG00000170128|ENST00000304244|GPR25	ENSG00000170128|ENST00000304244|GPR25	ENSG00000170128|ENST00000304244|GPR25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7879943847656	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.76402	1	2359	2359		35.201	0	1	12467000			29486	6561	19737	19747	33538	33538					0.11308733942337312
LLAGPLEV	8	Unmodified	_LLAGPLEV_					0	0	0			REV__ENSG00000146477|ENST00000275300|SLC22A3	REV__ENSG00000146477|ENST00000275300|SLC22A3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2483215332031	2	406.249829	810.485105	-1.1354	-0.00046124	-1.5216	-0.00061817	-2.657	-0.0010794	406.24912053143106	91.114	2.1144	91.114	90.563	92.677	0					101	49	3	0	0	0	0.88915	1	8950	8950		35.201	1.6851	1	849560	+		29487	20021	19738	19748	33539	33539					0.07228185499855044
LLAGPLHILE	10	Unmodified	_LLAGPLHILE_					0	0	0		ENST00000554270.5_1_14:88936247-89016761:-|nuORF;ENSG00000070778|ENST00000556564|PTPN21	ENST00000554270.5_1_14:88936247-89016761:-|nuORF	ENST00000554270.5_1_14:88936247-89016761:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326171875	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.85939	1	12538	12538		23.042	5.6775	1	4041000			29488	1251	19739	19749	33540	33540					0.10939479408148145
LLAGPRWAV	9	Unmodified	_LLAGPRWAV_					0	0	0			REV__ENST00000454219.1_1_1:100435257-100435413:-|nuORF	REV__ENST00000454219.1_1_1:100435257-100435413:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.76812744140625	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.406	1	69.541	69.041	70.041	0.13522								0	0	0	0.31472	1	6275	6275		25.45	2.4077	1		+		29489	26922	19740	19750	33541	33541					0.08446074267988024
LLAGRRQL	8	Unmodified	_LLAGRRQL_					0	0	0			REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8002014160156	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.84341	2	3408	3408;3443		24.203	1.1603	1	1570500	+		29490	22929	19741	19751	33542;33543	33542					0.11636592499519338
LLAGVIVK	8	Unmodified	_LLAGVIVK_					0	0	0			REV__nc|ENSG00000168356|Q9UI33-2|SCN11A	REV__nc|ENSG00000168356|Q9UI33-2|SCN11A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78521728515625	2	406.783839	811.553125	0.022938	9.3307E-06	3.6731	0.0014942	3.696	0.0015035	406.7851827724374	33.215	0.93484	33.182	32.78	33.715	-0.032677					97	42	3	0	0	0	0.82464	1	1617	1617		21.702	0	1	368720	+		29491	21481	19742	19752	33544	33544					0.13981055150509292
LLAHDLLRTSL	11	Unmodified	_LLAHDLLRTSL_					0	0	0		ENST00000540703.1_1_12:22671059-22672147:-|nuORF	ENST00000540703.1_1_12:22671059-22672147:-|nuORF	ENST00000540703.1_1_12:22671059-22672147:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.29766845703125	3	417.918834	1250.73467	-1.1925	-0.00049835	4.3022	0.001798	3.1098	0.0012996	417.91989512771016	68.218	0.13589	68.278	68.184	68.32	0.05928					5	4	2	0	0	0	0.1747	1	6100	6100		34.087	0	1	18634			29492	13505	19743	19753	33545	33545					0.11933323385642325
LLAHFINAYLV	11	Unmodified	_LLAHFINAYLV_					0	0	0		nc|ENSG00000137409|Q9NZJ7-3|MTCH1;nc|ENSG00000137409|Q9NZJ7-2|MTCH1;ENSG00000137409|ENST00000373627|MTCH1	nc|ENSG00000137409|Q9NZJ7-3|MTCH1	nc|ENSG00000137409|Q9NZJ7-3|MTCH1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	637.8720703125	2	637.368798	1272.72304	0.0096069	6.1232E-06	2.6524	0.0016906	2.662	0.0016967	637.3704089191367	105.98	2.6955	105.98	104.5	107.2	0					156	62	4	0	0	0	0.71452	1	11051	11051		29.15	4.6304	1	1384300			29493	4196	19744	19754	33546	33546					0.09759126362268944
LLAHLFDVVN	10	Unmodified	_LLAHLFDVVN_					0	0	0			REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.82275390625	2	570.824224	1139.63389	-0.44856	-0.00025605	0.78362	0.00044731	0.33506	0.00019126	570.8243844075674	61.574	0.9001	61.59	61.334	62.234	0.015724					68	38	2	0	0	0	0.86218	1	5373	5373		32.812	3.6424	1	801440	+		29494	19887	19745	19755	33547	33547					0.06966291402773095
LLAHLPRY	8	Unmodified	_LLAHLPRY_					0	0	0		ENSG00000167103|ENST00000388747|PIP5KL1;ENST00000476624.1_1_9:130688090-130689999:-|nuORF;ENST00000490773.5_1_9:130687427-130690958:-|nuORF;ENST00000498783.5_1_9:130687427-130690958:-|nuORF	ENSG00000167103|ENST00000388747|PIP5KL1	ENSG00000167103|ENST00000388747|PIP5KL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79547119140625	2	491.795269	981.575986	-1.6029	-0.00078829	2.358	0.0011597	0.75513	0.00037137	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.81548	1	3276	3276		20.482	1.1219	1	603870			29495	6266	19746	19756	33548	33548					0.08446074267988024
LLAHRPLL	8	Unmodified	_LLAHRPLL_					0	0	0		ENST00000472018.5_1_16:89760470-89762097:+|nuORF;ENST00000505733.5_1_16:89758861-89762180:+|nuORF;nc|ENSG00000185324|Q15131-4|CDK10;nc|ENSG00000185324|Q15131-3|CDK10;nc|ENSG00000185324|Q15131-7|CDK10;nc|ENSG00000185324|Q15131-2|CDK10;ENSG00000185324|ENST00000353379|CDK10	ENST00000472018.5_1_16:89760470-89762097:+|nuORF	ENST00000472018.5_1_16:89760470-89762097:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.5392150878906	2	466.805637	931.596721	-0.09599	-4.4809E-05	1.6062	0.00074978	1.5102	0.00070497	466.80628278144013	30.955	0.98967	30.959	30.667	31.656	0.0037212					50	22	3	0	0	0	0.4196	1	2041	2041		23.037	3.6767	1	324980			29496	7702	19747	19757	33549	33549					0.12818664647659261
LLAHYPRI	8	Unmodified	_LLAHYPRI_					0	0	0			REV__ENSG00000103148|ENST00000611875|NPRL3	REV__ENSG00000103148|ENST00000611875|NPRL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958679199219	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.86791	1	3716	3716		28.254	0	1	1240000	+		29497	17390	19748	19758	33550	33550					0.08446074267999393
LLAHYPRI	8	Unmodified	_LLAHYPRI_					0	0	0			REV__ENSG00000103148|ENST00000611875|NPRL3	REV__ENSG00000103148|ENST00000611875|NPRL3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7967834472656	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.817	1	56.789	56.289	57.289	-0.02866								0	0	0	0.29353	1	5213	5213		28.254	0	1		+		29498	17390	19748	19758	33551	33551					0.08446074267999393
LLAHYPRI	8	Unmodified	_LLAHYPRI_					0	0	0			REV__ENSG00000103148|ENST00000611875|NPRL3	REV__ENSG00000103148|ENST00000611875|NPRL3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7960510253906	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.432	1	58.519	58.019	59.019	0.087002								0	0	0	0.29498	1	4970	4970		26.796	0	1		+		29499	17390	19748	19758	33552	33552					0.08446074267999393
LLAHYPRI	8	Unmodified	_LLAHYPRI_					0	0	0			REV__ENSG00000103148|ENST00000611875|NPRL3	REV__ENSG00000103148|ENST00000611875|NPRL3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79705810546875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.61	1	66.736	66.236	67.236	0.12649								0	0	0	0.30125	1	5924	5924		20.482	0	1		+		29500	17390	19748	19758	33553	33553					0.08446074267999393
LLAHYPRI	8	Unmodified	_LLAHYPRI_					0	0	0			REV__ENSG00000103148|ENST00000611875|NPRL3	REV__ENSG00000103148|ENST00000611875|NPRL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7922668457031	2	491.795269	981.575986	-1.178	-0.00057935	-0.11787	-5.7967E-05	-1.2959	-0.00063732	491.79505307157757	43.662	1.2118	44.112	43.311	44.523	0.45025					60	29	3	0	0	0	0.88915	1	3910	3910		35.201	0	1	1655700	+		29501	17390	19748	19758	33554	33554					0.08446074267999393
LLAHYPRI	8	Unmodified	_LLAHYPRI_					0	0	0			REV__ENSG00000103148|ENST00000611875|NPRL3	REV__ENSG00000103148|ENST00000611875|NPRL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7950439453125	2	491.795269	981.575986	-1.2395	-0.00060959	1.4172	0.00069695	0.17764	8.7362E-05	491.7958275421146	44.647	1.7443	45.492	44.612	46.357	0.84437					115	42	4	0	0	0	0.81724	1	4160	4160		14.664	0	1	6753400	+		29502	17390	19748	19758	33555	33555					0.08446074267999393
LLAIALLEG	9	Unmodified	_LLAIALLEG_					0	0	0		nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1;ENST00000487016.1_1_3:4774792-4777134:+|nuORF	nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79010009765625	2	456.791861	911.569169	-0.73784	-0.00033704	3.4705	0.0015853	2.7326	0.0012482	456.79333098184276	49.768	2.9671	49.744	48.401	51.368	-0.024029					154	74	4	0	0	0	0.7932	1	4336	4336		25.45	0	1	161210			29503	5087	19749	19759	33556	33556					0.10984716596760791
LLAIEGPSLL	10	Unmodified	_LLAIEGPSLL_					0	0	0			REV__ENST00000592800.5_2_17:66526404-66526587:+|nuORF	REV__ENST00000592800.5_2_17:66526404-66526587:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3161010742188	2	513.3157	1024.61685	-1.4711	-0.00075512	3.5902	0.0018429	2.1191	0.0010878	513.3174116406972	46.45	1.1988	46.45	46.135	47.334	0					64	33	3	0	0	0	0.86305	1	3496	3496		31.955	0	1	153170	+		29504	29219	19750	19760	33557	33557					0.10552370796949617
LLAIEGPSLL	10	Unmodified	_LLAIEGPSLL_					0	0	0			REV__ENST00000592800.5_2_17:66526404-66526587:+|nuORF	REV__ENST00000592800.5_2_17:66526404-66526587:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3167724609375	2	513.3157	1024.61685	0.3202	0.00016436	0.87435	0.00044882	1.1945	0.00061318	513.3159908318282	43.284	1.4208	43.257	42.839	44.259	-0.026768					81	33	4	0	0	0	0.86201	1	3273	3273		24.203	1.1603	1	394850	+		29505	29219	19750	19760	33558	33558					0.10552370796949617
LLAIEGPSLL	10	Unmodified	_LLAIEGPSLL_					0	0	0			REV__ENST00000592800.5_2_17:66526404-66526587:+|nuORF	REV__ENST00000592800.5_2_17:66526404-66526587:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3175659179688	2	513.3157	1024.61685	0.20062	0.00010298	1.8244	0.00093651	2.0251	0.0010395	513.3165818286456	46.69	1.0794	46.676	46.276	47.355	-0.013821					47	28	2	0	0	0	0.85939	1	3746	3746		23.042	0	1	139720	+		29506	29219	19750	19760	33559	33559					0.10552370796949617
LLAIEGPSLL	10	Unmodified	_LLAIEGPSLL_					0	0	0			REV__ENST00000592800.5_2_17:66526404-66526587:+|nuORF	REV__ENST00000592800.5_2_17:66526404-66526587:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.3154907226562	2	513.3157	1024.61685	-1.7271	-0.00088655	3.144	0.0016138	1.4168	0.00072729	513.3171524632667	41.711	0.92437	42.125	41.86	42.784	0.4139					63	23	4	0	0	0	0.86452	1	3711	3711		30.504	0	1	2398900	+		29507	29219	19750	19760	33560	33560					0.10552370796949617
LLAIEGPSLL	10	Unmodified	_LLAIEGPSLL_					0	0	0			REV__ENST00000592800.5_2_17:66526404-66526587:+|nuORF	REV__ENST00000592800.5_2_17:66526404-66526587:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.31640625	2	513.3157	1024.61685	-1.3213	-0.00067824	2.9844	0.001532	1.6631	0.00085372	513.3170421973575	41.563	0.75494	42.197	41.952	42.707	0.6339					58	19	4	0	0	0	0.86305	1	3693	3693		31.955	0.42505	1	2273900	+		29508	29219	19750	19760	33561	33561					0.10552370796949617
LLAIESTLA	9	Unmodified	_LLAIESTLA_					0	0	0			REV__ENSG00000163902|ENST00000296255|RPN1	REV__ENSG00000163902|ENST00000296255|RPN1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7779235839844	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.047	1	79.178	78.678	79.678	0.13086								0	0	0	0.29299	1	7480	7480		33.516	0.022601	1		+		29509	20995	19751	19761	33562	33562					0.07575822354465345
LLAILCPGT	9	Carbamidomethyl (C)	_LLAILC(Carbamidomethyl (C))PGT_	LLAILC(1)PGT		LLAILC(42)PGT		0	1	0		ENST00000318006.9_1_15:42452801-42452900:-|nuORF	ENST00000318006.9_1_15:42452801-42452900:-|nuORF	ENST00000318006.9_1_15:42452801-42452900:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2777404785156	2	479.275521	956.536489	-0.098244	-4.7086E-05	4.0257	0.0019294	3.9274	0.0018823	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.67235	1	8742	8742		42.474	13.325	1	6799600			29510	10000	19752	19762	33563	33563	130				0.05648186202245142
LLAIPVEK	8	Unmodified	_LLAIPVEK_					0	0	0		ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1	ENSG00000198554|ENST00000360586|WDHD1	ENSG00000198554|ENST00000360586|WDHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2888488769531	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.81724	1	2904	2904		14.664	0.88877	1	15753000			29511	8286	19753	19763	33564	33564					0.11308733942325944
LLAIPVEK	8	Unmodified	_LLAIPVEK_					0	0	0		ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1	ENSG00000198554|ENST00000360586|WDHD1	ENSG00000198554|ENST00000360586|WDHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7873840332031	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.86791	1	2649	2649		28.254	0	1	10215000			29512	8286	19753	19763	33565	33565					0.11308733942325944
LLAKAQHVF	9	Unmodified	_LLAKAQHVF_					0	0	0		nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;ENST00000484268.1_1_7:48352666-48443694:+|nuORF	nc|ENSG00000179869|Q86UQ4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.80908203125	2	513.808377	1025.6022	-0.38907	-0.00019991	1.6539	0.00084981	1.2649	0.0006499	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.7932	1	3601	3601		26.796	3.7536	1	1358900			29513	7298	19754	19764	33566	33566					0.0904234343945518
LLAKFLEKKYA	11	Unmodified	_LLAKFLEKKYA_					0	0	0		CON__P34955	CON__P34955	CON__P34955	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.9394836425781	3	441.939346	1322.79621	0.63201	0.00027931	0.44307	0.00019581	1.0751	0.00047512	441.93938161315157	55.264	1.2271	55.292	54.682	55.909	0.027142					77	31	3	0	0	0	0.77511	1	4945	4945		16.53	0	1	422510		+	29514	597	19755	19765	33567	33567					0.1477225508488118
LLAKFLEKKYA	11	Unmodified	_LLAKFLEKKYA_					0	0	0		CON__P34955	CON__P34955	CON__P34955	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9399108886719	3	441.939346	1322.79621	-0.63553	-0.00028087	1.7187	0.00075957	1.0832	0.0004787	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.72892	1	4574	4574		26.75	1.6237	1	409610		+	29515	597	19755	19765	33568	33568					0.1477225508488118
LLAKGLLIFL	10	Unmodified	_LLAKGLLIFL_					0	0	0		nc|ENSG00000162723|Q96A28-2|SLAMF9;ENSG00000162723|ENST00000368093|SLAMF9	nc|ENSG00000162723|Q96A28-2|SLAMF9	nc|ENSG00000162723|Q96A28-2|SLAMF9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.8773193359375	2	550.875728	1099.7369	3.4102	0.0018786	2.9338	0.0016162	6.344	0.0034947	550.8772112738451	108.99	0.56081	108.96	108.67	109.23	-0.029381					52	22	3	0	0	0	0.87636	1	12116	12116		12.959	1.4482	1	2297500			29516	5724	19756	19766	33569	33569					0.19102403861370476
LLAKGLLIFL	10	Unmodified	_LLAKGLLIFL_					0	0	0		nc|ENSG00000162723|Q96A28-2|SLAMF9;ENSG00000162723|ENST00000368093|SLAMF9	nc|ENSG00000162723|Q96A28-2|SLAMF9	nc|ENSG00000162723|Q96A28-2|SLAMF9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8789672851562	2	550.875728	1099.7369	5.0694	0.0027926	1.3496	0.00074346	6.419	0.003536	550.8764150186146	108.94	0.53165	109.03	108.77	109.3	0.09005					44	23	2	0	0	0	0.88106	1	13290	13290		12.207	0	1	1145600			29517	5724	19756	19766	33570	33570					0.19102403861370476
LLAKHAIVICN	11	Unmodified	_LLAKHAIVICN_					0	0	0		ENSG00000122218|ENST00000241704|COPA;ENST00000481522.1_1_1:160275221-160275586:-|nuORF	ENSG00000122218|ENST00000241704|COPA	ENSG00000122218|ENST00000241704|COPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.856689453125	2	597.855001	1193.69545	-0.56163	-0.00033577	2.7443	0.0016407	2.1826	0.0013049	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.58425	1	10043	10043		45.972	4.5456	1	6282800			29518	3214	19757	19767	33571	33571					0.10634899830392897
LLAKPTVP	8	Unmodified	_LLAKPTVP_					0	0	0			REV__ENSG00000163013|ENST00000520530|FBXO41	REV__ENSG00000163013|ENST00000520530|FBXO41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7741394042969	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.87922	1	3325	3325		31.955	2.1133	1	10965000	+		29519	20872	19758	19768	33572	33572					0.1071246477083605
LLAKPTVP	8	Unmodified	_LLAKPTVP_					0	0	0			REV__ENSG00000163013|ENST00000520530|FBXO41	REV__ENSG00000163013|ENST00000520530|FBXO41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7747802734375	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.87922	1	3395	3395		31.955	5.1588	1	10266000	+		29520	20872	19758	19768	33573	33573					0.1071246477083605
LLAKPTVP	8	Unmodified	_LLAKPTVP_					0	0	0			REV__ENSG00000163013|ENST00000520530|FBXO41	REV__ENSG00000163013|ENST00000520530|FBXO41	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.77386474609375	2	419.773471	837.53239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.177	1	44.175	43.675	44.675	-0.002449								0	0	0	0.30045	1	3440	3440		40.573	3.5441	1		+		29521	20872	19758	19768	33574	33574					0.1071246477083605
LLAKQIMSA	9	Unmodified	_LLAKQIMSA_					0	0	0			REV__ENST00000557016.5_1_14:69864995-69865148:-|nuORF	REV__ENST00000557016.5_1_14:69864995-69865148:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7906494140625	2	487.788795	973.563038	0.64552	0.00031488	3.0925	0.0015085	3.738	0.0018234	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.77546	1	8128	8128		31.955	3.7006	1	1929300	+		29522	28710	19759	19769	33575	33575					0.0751987509358969
LLAKVELEKR	10	Unmodified	_LLAKVELEKR_					0	0	0		ENSG00000134318|ENST00000315872|ROCK2	ENSG00000134318|ENST00000315872|ROCK2	ENSG00000134318|ENST00000315872|ROCK2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	599.8748779296875	2	599.87953	1197.74451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.34	1	103.34	102.84	103.84	0								0	0	0	0.45132	1	10595	10595		15.642	5.3766	1				29523	3928	19760	19770	33576	33576					0.15354511390978587
LLAKVNGP	8	Unmodified	_LLAKVNGP_					0	0	0			REV__ENSG00000104450|ENST00000388798|SPAG1;REV__nc|ENSG00000104450|Q07617-2|SPAG1	REV__ENSG00000104450|ENST00000388798|SPAG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2976989746094	2	406.255446	810.496338	1.6245	0.00065995	1.5127	0.00061456	3.1372	0.0012745	406.2560078459912	67.905	0.91415	68.29	68.111	69.025	0.38482					29	21	2	0	0	0	0.4196	1	7433	7433		37.028	8.7742	1	68447	+		29524	17459;29753	19761	19771	33577	33577					0.08351007593989834
LLAKVNGP	8	Unmodified	_LLAKVNGP_					0	0	0			REV__ENSG00000104450|ENST00000388798|SPAG1;REV__nc|ENSG00000104450|Q07617-2|SPAG1	REV__ENSG00000104450|ENST00000388798|SPAG1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	406.255446	810.496338	-0.18841	-7.6542E-05	3.2159	0.0013065	3.0274	0.0012299	406.2565665484172	68.33	0.85134	68.351	67.872	68.724	0.021599	-0.034762	4.4049E-05	NaN	37.028	54	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64112	+		29525	17459;29753	19761	19771							0.08351007593989834
LLAKVNGP	8	Unmodified	_LLAKVNGP_					0	0	0			REV__ENSG00000104450|ENST00000388798|SPAG1;REV__nc|ENSG00000104450|Q07617-2|SPAG1	REV__ENSG00000104450|ENST00000388798|SPAG1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.8504	-0.00075174	4.7302	0.0019217	2.8798	0.0011699	406.25720778578926	68.382	0.57445	68.517	68.179	68.753	0.13522	0.13088	0.0012745	NaN	37.028	29	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108030	+		29526	17459;29753	19761	19771							0.08351007593989834
LLALAPALT	9	Unmodified	_LLALAPALT_					0	0	0		ENST00000217289.8_1_20:6103562-6103802:-|nuORF	ENST00000217289.8_1_20:6103562-6103802:-|nuORF	ENST00000217289.8_1_20:6103562-6103802:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78765869140625	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.7932	1	2897	2897		19.36	0	1	14534000			29527	9149	19762	19772	33578	33578					0.11308733942303206
LLALARCL	8	Unmodified	_LLALARCL_					0	0	0			REV__ENSG00000117868|ENST00000275418|ESYT2	REV__ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.77227783203125	2	436.772948	871.531344	0.37686	0.0001646	1.37	0.00059837	1.7468	0.00076298	436.77341022193644	26.318	0.4133	26.346	26.113	26.526	0.02817					33	18	2	0	0	0	0.81548	1	988	988		20.482	0	1	141420	+		29528	18285	19763	19773	33579	33579					0.0904392713028983
LLALARCL	8	Unmodified	_LLALARCL_					0	0	0			REV__ENSG00000117868|ENST00000275418|ESYT2	REV__ENSG00000117868|ENST00000275418|ESYT2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	436.772948	871.531344	0.064831	2.8317E-05	1.7526	0.00076551	1.8175	0.00079382	436.77360082478805	26.186	0.49975	26.291	25.975	26.474	0.1054	-0.027694	0.00014235	NaN	20.482	37	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	131610	+		29529	18285	19763	19773							0.0904392713028983
LLALCSRPAVG	11	Carbamidomethyl (C)	_LLALC(Carbamidomethyl (C))SRPAVG_	LLALC(1)SRPAVG		LLALC(74)SRPAVG		0	1	0		nc|ENSG00000118523|P29279-2|CCN2;ENSG00000118523|ENST00000367976|CCN2	nc|ENSG00000118523|P29279-2|CCN2	nc|ENSG00000118523|P29279-2|CCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.8313598632812	2	578.828983	1155.64341	0.67725	0.00039201	0.14455	8.3668E-05	0.8218	0.00047568	578.8288453304918	100.76	1.3332	101.06	100.1	101.44	0.2999					50	33	2	0	0	0	0.29693	1	12252	12252		74.255	10.048	1	255930			29530	3036	19764	19774	33580	33580	35				0.0718173641660087
LLALESPVAL	10	Unmodified	_LLALESPVAL_					0	0	0			REV__ENST00000586720.5_1_17:76967660-76975958:-|nuORF	REV__ENST00000586720.5_1_17:76967660-76975958:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3154907226562	2	513.3157	1024.61685	-0.40874	-0.00020981	2.4775	0.0012717	2.0687	0.0010619	513.3169683772445	55.191	1.5464	55.154	54.574	56.12	-0.036827					75	51	2	0	0	0	0.81018	1	4600	4600		38.806	3.1879	1	226240	+		29531	17727	19765	19775	33581	33581					0.10552370796949617
LLALFFLPFCL	11	Unmodified	_LLALFFLPFCL_					0	0	0		ENSG00000082196|ENST00000382065|C1QTNF3;ENST00000508434.1_1_5:34033255-34043308:-|nuORF;nc|ENSG00000082196|Q9BXJ4-2|C1QTNF3;nc|ENSG00000082196|Q9BXJ4|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.8734130859375	2	648.874871	1295.73519	-0.0025716	-1.6686E-06	-4.478	-0.0029057	-4.4806	-0.0029073	648.8719439244529	99.494	2.1461	99.535	98.831	100.98	0.041107					134	49	3	0	0	0	0.63354	1	10631	10631		40.573	0.51445	1	250130			29532	1481	19766	19776	33582	33582					0.09915026781095548
LLALFSNLV	9	Unmodified	_LLALFSNLV_					0	0	0		ENSG00000185101|ENST00000332826|ANO9;nc|ENSG00000185101|A1A5B4-2|ANO9;ENST00000534161.5_1_11:418373-429524:-|nuORF;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF	ENSG00000185101|ENST00000332826|ANO9	ENSG00000185101|ENST00000332826|ANO9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.3042907714844	2	495.305136	988.595718	-0.66585	-0.0003298	0.93457	0.0004629	0.26872	0.0001331	495.3054548955284	64.721	0.78749	65.107	64.732	65.519	0.38615					39	18	3	0	0	0	0.74721	1	7000	7000		37.159	0.71236	1	274140			29533	7679	19767	19777	33583	33583					0.10096405488081928
LLALGAPWR	9	Unmodified	_LLALGAPWR_					0	0	0		ENST00000431582.6_1_X:2527436-2533991:+|nuORF	ENST00000431582.6_1_X:2527436-2533991:+|nuORF	ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.8034362792969	2	498.803094	995.591636	-1.4653	-0.00073091	2.6111	0.0013024	1.1457	0.00057149	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.7932	1	4223	4223		26.796	5.0938	1	2964600			29534	11651	19768	19778	33584	33584					0.09366360785031702
LLALGAPWR	9	Unmodified	_LLALGAPWR_					0	0	0		ENST00000431582.6_1_X:2527436-2533991:+|nuORF	ENST00000431582.6_1_X:2527436-2533991:+|nuORF	ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8036804199219	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.7932	1	4465	4465		26.796	1.3459	1	2702800			29535	11651	19768	19778	33585	33585					0.09366360785031702
LLALGAPWR	9	Unmodified	_LLALGAPWR_					0	0	0		ENST00000431582.6_1_X:2527436-2533991:+|nuORF	ENST00000431582.6_1_X:2527436-2533991:+|nuORF	ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.8027648925781	2	498.803094	995.591636	-0.60409	-0.00030132	1.8273	0.00091145	1.2232	0.00061013	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.7932	1	4313	4313		26.796	2.5934	1	2424700			29536	11651	19768	19778	33586	33586					0.09366360785031702
LLALGAPWR	9	Unmodified	_LLALGAPWR_					0	0	0		ENST00000431582.6_1_X:2527436-2533991:+|nuORF	ENST00000431582.6_1_X:2527436-2533991:+|nuORF	ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.8037414550781	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.7932	1	4173	4173		25.45	2.4077	1	2538600			29537	11651	19768	19778	33587	33587					0.09366360785031702
LLALGLLAAG	10	Unmodified	_LLALGLLAAG_					0	0	0		nc|ENSG00000196136|P01011-3|SERPINA3;nc|ENSG00000196136|P01011-2|SERPINA3;ENSG00000196136|ENST00000393078|SERPINA3	nc|ENSG00000196136|P01011-3|SERPINA3	nc|ENSG00000196136|P01011-3|SERPINA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.300048828125	2	456.299853	910.585153	0.074499	3.3994E-05	-0.15018	-6.8526E-05	-0.075679	-3.4532E-05	456.2996643113994	52.244	1.0704	52.912	52.596	53.667	0.6673					60	25	4	0	0	0	0.37839	1	5227	5227		65.897	11.133	1	3592600			29538	8017	19769	19779	33588	33588					0.12628422833643071
LLALGPSLV	9	Unmodified	_LLALGPSLV_					0	0	0		ENST00000301765.9_1_11:60899010-60899583:-|nuORF	ENST00000301765.9_1_11:60899010-60899583:-|nuORF	ENST00000301765.9_1_11:60899010-60899583:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7880554199219	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.64338	1	2678	2678		44.531	0	1	10215000			29539	9810	19770	19780	33589	33589					0.11308733942337312
LLALGVRA	8	Unmodified	_LLALGVRA_					0	0	0		ENSG00000169894|ENST00000379458|MUC3A;ENSG00000164615|ENST00000297156|CAMLG	ENSG00000169894|ENST00000379458|MUC3A	ENSG00000169894|ENST00000379458|MUC3A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852478027344	2	406.771263	811.527973	2.7395	0.0011144	2.5896	0.0010534	5.3291	0.0021677	406.7721693400061	29.598	0.13969	29.582	29.524	29.663	-0.015167					6	4	2	0	0	0	0.4196	1	1502	1502		9.4706	5.1543	1	5672.8			29540	6536	19771	19781	33590	33590					0.11467000347931844
LLALIGAYVY	10	Unmodified	_LLALIGAYVY_					0	0	0			REV__ENSG00000163870|ENST00000355552|TPRA1	REV__ENSG00000163870|ENST00000355552|TPRA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.775634765625	2	548.326068	1094.63758	-1.6118	-0.0008838	-2.4084	-0.0013206	-4.0202	-0.0022044	548.3245991225559	47.374	0.43364	47.846	47.65	48.084	0.4714					16	10	2	0	0	0	0.37624	1	4515	4515		35.201	16.939	1	212190	+		29541	20986	19772	19782	33591	33591					0.09404961176619508
LLALKKPE	8	Unmodified	_LLALKKPE_					0	0	0		ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3001708984375	2	456.299853	910.585153	-0.85173	-0.00038864	0.76704	0.00035	-0.084692	-3.8645E-05	456.30009221877316	52.472	1.4857	52.896	52.517	54.003	0.42348					62	35	3	0	0	0	0.3646	3	5243	5243;5255;5282		90.777	16.522	1	2903100			29542	4784	19773	19783	33592;33593;33594	33592					0.1262842283365444
LLALKKPE	8	Unmodified	_LLALKKPE_					0	0	0		ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.29986572265625	2	456.299853	910.585153	0.074499	3.3994E-05	-0.15018	-6.8526E-05	-0.075679	-3.4532E-05	456.2996643113994	52.244	1.0704	52.912	52.596	53.667	0.6673					60	25	4	0	0	0	0.72312	2	5239	5217;5239		66.429	6.5852	1	3592600			29543	4784	19773	19783	33595;33596	33596					0.1262842283365444
LLALKMQN	8	Unmodified	_LLALKMQN_					0	0	0			REV__ENST00000445565.1_1_1:119689248-119689368:+|nuORF	REV__ENST00000445565.1_1_1:119689248-119689368:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77703857421875	2	465.775688	929.536823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.172	1	79.118	78.618	79.618	-0.053558								0	0	0	0.29694	1	7915	7915		37.028	1.8278	1		+		29544	26797	19774	19784	33597	33597					0.06923605922111165
LLALLAFD	8	Unmodified	_LLALLAFD_					0	0	0		ENSG00000185294|ENST00000329196|SPPL2C	ENSG00000185294|ENST00000329196|SPPL2C	ENSG00000185294|ENST00000329196|SPPL2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26422119140625	2	438.265479	874.516405	-1.5833	-0.00069392	-3.2181	-0.0014104	-4.8014	-0.0021043	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.81548	1	2397	2397		20.482	0	1	11160000			29545	7699	19775	19785	33598	33598					0.07412758533939723
LLALLAFD	8	Unmodified	_LLALLAFD_					0	0	0		ENSG00000185294|ENST00000329196|SPPL2C	ENSG00000185294|ENST00000329196|SPPL2C	ENSG00000185294|ENST00000329196|SPPL2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2633972167969	2	438.265479	874.516405	-1.5666	-0.00068658	-3.1125	-0.0013641	-4.6791	-0.0020507	438.2640033133023	45.783	1.2838	45.798	45.032	46.315	0.015511					49	34	2	0	0	0	0.81548	1	3243	3243		20.482	0	1	101570			29546	7699	19775	19785	33599	33599					0.07412758533939723
LLALLAHGLSL	11	Unmodified	_LLALLAHGLSL_					0	0	0		nc|ENSG00000063015|Q53EL9-3|SEZ6;ENSG00000063015|ENST00000317338|SEZ6;nc|ENSG00000063015|Q53EL9-4|SEZ6	nc|ENSG00000063015|Q53EL9-3|SEZ6	nc|ENSG00000063015|Q53EL9-3|SEZ6	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8707885742188	2	560.858067	1119.70158	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.533	1	16.533	16.033	17.033	0								0	0	0	0.56276	1	131	131		20.947	0	1				29547	1087	19776	19786	33600	33600					0.1465174133356868
LLALLIEVLV	10	Unmodified	_LLALLIEVLV_					0	0	0			REV__ENSG00000132382|ENST00000254718|MYBBP1A	REV__ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3751220703125	2	548.373018	1094.73148	-0.49859	-0.00027341	2.6391	0.0014472	2.1405	0.0011738	548.3742417671841	35.313	1.4945	35.32	34.937	36.431	0.0063896					91	33	3	0	0	0	0.84874	1	2277	2277		18.324	0.95945	1	324130	+		29548	18999	19777	19787	33601	33601					0.18790680278880245
LLALLLAR	8	Unmodified	_LLALLLAR_					0	0	0		nc|ENSG00000007038|Q9Y6M0-3|PRSS21;ENSG00000215148|ENST00000399677|PRSS41;nc|ENSG00000007038|Q9Y6M0-2|PRSS21;ENSG00000007038|ENST00000005995|PRSS21;nc|ENSG00000215148|Q7RTY9|PRSS41	nc|ENSG00000007038|Q9Y6M0-3|PRSS21	nc|ENSG00000007038|Q9Y6M0-3|PRSS21	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78631591796875	2	441.810388	881.606223	-2.481	-0.0010961	-4.2418	-0.0018741	-6.7227	-0.0029702	441.8079282002169	40.7	0.13327	41.092	41.032	41.165	0.39209					5	3	2	0	0	0	0.4196	1	3511	3511		13.775	5.544	1	316830			29549	717	19778	19788	33602	33602					0.16068432933172971
LLALLLAR	8	Unmodified	_LLALLLAR_					0	0	0		nc|ENSG00000007038|Q9Y6M0-3|PRSS21;ENSG00000215148|ENST00000399677|PRSS41;nc|ENSG00000007038|Q9Y6M0-2|PRSS21;ENSG00000007038|ENST00000005995|PRSS21;nc|ENSG00000215148|Q7RTY9|PRSS41	nc|ENSG00000007038|Q9Y6M0-3|PRSS21	nc|ENSG00000007038|Q9Y6M0-3|PRSS21	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7865905761719	2	441.810388	881.606223	-1.3273	-0.0005864	1.063	0.00046966	-0.26424	-0.00011674	441.81126043542696	40.847	0.35068	41.436	41.28	41.63	0.58915					13	9	2	0	0	0	0.4196	1	3518	3518		8.2313	3.915	1	853050			29550	717	19778	19788	33603	33603					0.16068432933172971
LLALLPPFL	9	Unmodified	_LLALLPPFL_					0	0	0			REV__ENST00000336156.9_1_22:45592780-45592966:-|nuORF	REV__ENST00000336156.9_1_22:45592780-45592966:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7474060058594	2	498.828246	995.64194	-0.16999	-8.4797E-05	-4.1266	-0.0020585	-4.2966	-0.0021433	498.8260843252735	67.629	1.4239	68.177	67.689	69.113	0.54819					71	33	3	0	0	0	0.20789	1	7516	7516		29.842	0	1	799870	+		29551	25180	19779	19789	33604	33604					0.1439447039016386
LLALLPSLS	9	Unmodified	_LLALLPSLS_					0	0	0		ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.7999267578125	2	463.799686	925.584819	-1.1413	-0.00052933	2.885	0.001338	1.7437	0.00080871	463.8009223906452	41.714	1.3576	41.718	41.166	42.524	0.0043983					77	36	3	0	0	0	0.7932	1	2697	2697		24.203	1.1603	1	388800			29552	7734	19780	19790	33605	33605					0.11905003113804469
LLALLPSVG	9	Unmodified	_LLALLPSVG_					0	0	0			REV__ENST00000402010.6_1_11:63676765-63677272:+|nuORF	REV__ENST00000402010.6_1_11:63676765-63677272:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.787841796875	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.7932	1	3625	3625		19.36	1.0356	1	539980	+		29553	26259	19781	19791	33606	33606					0.11308733942325944
LLALLSLGE	9	Unmodified	_LLALLSLGE_					0	0	0		ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1	ENSG00000111530|ENST00000545606|CAND1	ENSG00000111530|ENST00000545606|CAND1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.78936767578125	2	464.789318	927.564084	-1.14	-0.00052988	4.1432	0.0019257	3.0031	0.0013958	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.7932	1	1822	1822		23.042	0	1	286820			29554	2583	19782	19792	33607	33607					0.09740412734140591
LLALLVLVK	9	Unmodified	_LLALLVLVK_					0	0	0		ENSG00000179178|ENST00000439858|TMEM125	ENSG00000179178|ENST00000439858|TMEM125	ENSG00000179178|ENST00000439858|TMEM125	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7760925292969	2	491.357171	980.699789	-0.19144	-9.4063E-05	-2.48	-0.0012185	-2.6714	-0.0013126	491.3558588424967	71.991	1.1149	72.542	71.99	73.105	0.55008					38	26	2	0	0	0	0.20789	1	7988	7988		3.9852	0	1	141220			29555	7254	19783	19793	33608	33608					0.20866732315596437
LLALNLPDVF	10	Unmodified	_LLALNLPDVF_					0	0	0		ENST00000492535.1_1_22:32889009-32894514:+|nuORF	ENST00000492535.1_1_22:32889009-32894514:+|nuORF	ENST00000492535.1_1_22:32889009-32894514:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.8301391601562	2	557.828975	1113.6434	-0.43888	-0.00024482	3.8231	0.0021327	3.3842	0.0018878	557.8312098012074	101.3	1.4308	101.3	100.82	102.25	0					75	34	3	0	0	0	0.85939	1	10327	10327		23.042	3.939	1	522930			29556	12703	19784	19794	33609	33609					0.09112059688277441
LLALPLAEA	9	Unmodified	_LLALPLAEA_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.78509521484375	2	455.784036	909.553519	-1.2569	-0.00057288	2.8694	0.0013078	1.6125	0.00073494	455.78522720735987	43.749	1.8731	43.758	43.065	44.938	0.0084534					75	44	2	0	0	0	0.7932	1	3030	3030		20.482	1.1219	1	212800	+		29557	22085	19785	19795	33610	33610					0.09512430079689693
LLALQALPL	9	Unmodified	_LLALQALPL_					0	0	0		ENST00000252108.7_1_11:118230359-118235796:+|nuORF	ENST00000252108.7_1_11:118230359-118235796:+|nuORF	ENST00000252108.7_1_11:118230359-118235796:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.3184814453125	2	476.315503	950.616454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.72	1	44.662	44.162	45.162	-0.058262								0	0	0	0.2969	1	3169	3169		31.955	4.0726	1				29558	9306	19786	19796	33611	33611					0.13916995867759852
LLALQHVLVMA	11	Unmodified	_LLALQHVLVMA_					0	0	0		ENSG00000213901|ENST00000409878|SLC23A3;nc|ENSG00000213901|Q6PIS1-5|SLC23A3;nc|ENSG00000213901|Q6PIS1-2|SLC23A3	ENSG00000213901|ENST00000409878|SLC23A3	ENSG00000213901|ENST00000409878|SLC23A3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3665771484375	2	604.365201	1206.71585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.89	1	119.86	119.36	120.36	-0.024033								0	0	0	0.56276	1	13279	13279		21.96	2.8564	1				29559	8605	19787	19797	33612	33612					0.12076070490206803
LLALRYRVG	9	Unmodified	_LLALRYRVG_					0	0	0			REV__ENST00000411689.6_1_6:46620850-46623676:+|nuORF	REV__ENST00000411689.6_1_6:46620850-46623676:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2811889648438	2	530.834926	1059.6553	0.45615	0.00024214	0.12021	6.3813E-05	0.57636	0.00030595	530.8350077197662	59.024	0.37573	59.138	58.945	59.321	0.11396					16	13	2	0	0	0	0.20789	1	5035	5035		31.955	0	1	62453	+		29560	26370	19788	19798	33613	33613					0.12785721222144275
LLALRYRVG	9	Unmodified	_LLALRYRVG_					0	0	0			REV__ENST00000411689.6_1_6:46620850-46623676:+|nuORF	REV__ENST00000411689.6_1_6:46620850-46623676:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	530.834926	1059.6553	-1.195	-0.00063433	0.70921	0.00037647	-0.48575	-0.00025786	530.8354491760306	59.244	0.3853	59.244	59.074	59.459	0	0.053073	0.00018681	NaN	24.203	21	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34577	+		29561	26370	19788	19798							0.12785721222144275
LLALSVGPI	9	Unmodified	_LLALSVGPI_					0	0	0		ENST00000367498.7_1_1:185280415-185286453:-|nuORF	ENST00000367498.7_1_1:185280415-185286453:-|nuORF	ENST00000367498.7_1_1:185280415-185286453:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78741455078125	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.7932	1	3451	3451		17.365	3.5896	1	325400			29562	10549	19789	19799	33614	33614					0.11308733942325944
LLALTTIIFD	10	Unmodified	_LLALTTIIFD_					0	0	0			REV__ENSG00000127362|ENST00000247879|TAS2R3	REV__ENSG00000127362|ENST00000247879|TAS2R3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.34033203125	2	560.336633	1118.65871	3.1377	0.0017581	3.0866	0.0017295	6.2243	0.0034877	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.86718	1	11282	11282		27.882	1.1893	1	83033000	+		29563	18730	19790	19800	33615	33615					0.1041292648549188
LLALVLSPG	9	Unmodified	_LLALVLSPG_					0	0	0		ENSG00000171811|ENST00000368586|CFAP46	ENSG00000171811|ENST00000368586|CFAP46	ENSG00000171811|ENST00000368586|CFAP46	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78765869140625	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.7932	1	2624	2624		19.36	0	1	9571700			29564	6713	19791	19801	33616	33616					0.11308733942337312
LLALWERVS	9	Unmodified	_LLALWERVS_					0	0	0			REV__ENST00000408031.1_1_22:47070518-47073075:+|nuORF	REV__ENST00000408031.1_1_22:47070518-47073075:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.81884765625	2	543.818941	1085.62333	0.88782	0.00048281	-4.3927	-0.0023888	-3.5049	-0.001906	543.8164815474648	25.135	0.43325	25.098	24.838	25.272	-0.037178					16	9	2	0	0	0	0.78058	1	985	985		30.504	1.3541	1	33509	+		29565	26324	19792	19802	33617	33617					0.08394308748324875
LLAMGIWP	8	Unmodified	_LLAMGIWP_					0	0	0		ENST00000477973.3_2_3:72427362-72427404:-|nuORF	ENST00000477973.3_2_3:72427362-72427404:-|nuORF	ENST00000477973.3_2_3:72427362-72427404:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7550048828125	2	450.754224	899.493896	-1.264	-0.00056978	1.1883	0.00053562	-0.075782	-3.4159E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.80127	1	7666	7666		16.705	0	1	414240			29566	12370	19793	19803	33618	33618					0.040128358646711604
LLANSAARK	9	Unmodified	_LLANSAARK_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28729248046875	2	472.287808	942.561064	-0.91025	-0.0004299	1.4853	0.00070148	0.57502	0.00027158	472.2885293382865	99.077	1.813	99.3	98.699	100.51	0.22263					102	42	3	0	0	0	0.7932	1	10273	10273		24.203	1.1603	1	580890			29567	8189	19794	19804	33619	33619					0.08748582399982752
LLANSKKT	8	Unmodified	_LLANSKKT_					0	0	0		ENSG00000132952|ENST00000255304|USPL1	ENSG00000132952|ENST00000255304|USPL1	ENSG00000132952|ENST00000255304|USPL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7713928222656	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.7961	1	2995	2995		17.365	0	1	9763800			29568	3845	19795	19805	33620	33620					0.08654375277126292
LLANSKKT	8	Unmodified	_LLANSKKT_					0	0	0		ENSG00000132952|ENST00000255304|USPL1	ENSG00000132952|ENST00000255304|USPL1	ENSG00000132952|ENST00000255304|USPL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7712097167969	2	437.77146	873.528367	-0.63876	-0.00027963	0.070293	3.0772E-05	-0.56847	-0.00024886	437.77162175664915	38.677	1.0193	39.199	38.87	39.89	0.52235					96	23	6	0	0	0	0.79929	1	3241	3241		18.324	0.062328	1	19739000			29569	3845	19795	19805	33621	33621					0.08654375277126292
LLAPLLGLTD	10	Unmodified	_LLAPLLGLTD_					0	0	0		ENST00000293883.8_3_16:739938-740058:-|nuORF	ENST00000293883.8_3_16:739938-740058:-|nuORF	ENST00000293883.8_3_16:739938-740058:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3170776367188	2	513.3157	1024.61685	-0.38757	-0.00019894	2.4414	0.0012532	2.0539	0.0010543	513.3170376628356	53.655	1.47	53.703	53.107	54.577	0.047802					76	53	2	0	0	0	0.86589	1	4364	4364		29.15	9.7896	1	209860			29570	9699	19796	19806	33622	33622					0.1055237079692688
LLAPLLSSL	9	Unmodified	_LLAPLLSSL_					0	0	0			REV__ENST00000407418.7_1_22:39261880-39262189:-|nuORF	REV__ENST00000407418.7_1_22:39261880-39262189:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8008117675781	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.78536	1	3273	3273		29.15	0	1	210360	+		29571	26317	19797	19807	33623	33623					0.11905003113804469
LLAPLLVILD	10	Unmodified	_LLAPLLVILD_					0	0	0		ENST00000473458.5_1_22:25240737-25320238:+|nuORF;ENSG00000167037|ENST00000400358|SGSM1;ENST00000480523.1_1_22:25240737-25320238:+|nuORF;nc|ENSG00000167037|Q2NKQ1|SGSM1;nc|ENSG00000167037|Q2NKQ1-3|SGSM1	ENST00000473458.5_1_22:25240737-25320238:+|nuORF	ENST00000473458.5_1_22:25240737-25320238:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.3590087890625	2	540.357368	1078.70018	0.26404	0.00014267	2.2426	0.0012118	2.5067	0.0013545	540.3583702946399	36.686	1.1714	36.789	36.281	37.453	0.10306					78	34	3	0	0	0	0.88945	1	2029	2029		10.866	0.6003	1	384450			29572	6262	19798	19808	33624	33624					0.16398107244799576
LLAPLLVILD	10	Unmodified	_LLAPLLVILD_					0	0	0		ENST00000473458.5_1_22:25240737-25320238:+|nuORF;ENSG00000167037|ENST00000400358|SGSM1;ENST00000480523.1_1_22:25240737-25320238:+|nuORF;nc|ENSG00000167037|Q2NKQ1|SGSM1;nc|ENSG00000167037|Q2NKQ1-3|SGSM1	ENST00000473458.5_1_22:25240737-25320238:+|nuORF	ENST00000473458.5_1_22:25240737-25320238:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.3584594726562	2	540.357368	1078.70018	-0.08079	-4.3656E-05	2.554	0.0013801	2.4732	0.0013364	540.3585375612031	37.328	1.0489	37.641	37.042	38.091	0.31312					64	25	4	0	0	0	0.85939	1	2990	2990		23.042	5.6775	1	1061500			29573	6262	19798	19808	33625	33625					0.16398107244799576
LLAPPLKS	8	Unmodified	_LLAPPLKS_					0	0	0			REV__nc|ENSG00000038427|P13611-5|VCAN	REV__nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7751770019531	2	419.773471	837.53239	0.29636	0.0001244	3.1717	0.0013314	3.4681	0.0014558	419.77476468640464	52.151	1.1529	52.21	51.751	52.904	0.059719					66	36	3	0	0	0	0.86288	1	4174	4174		26.796	0	1	170490	+		29574	16305	19799	19809	33626	33626					0.10712464770847419
LLAPRDPKSLR	11	Unmodified	_LLAPRDPKSLR_					0	0	0		ENST00000569236.5_1_16:27236541-27237087:-|nuORF	ENST00000569236.5_1_16:27236541-27237087:-|nuORF	ENST00000569236.5_1_16:27236541-27237087:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.59326171875	3	422.594461	1264.76155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55	1	54.95	54.45	55.45	-0.049271								0	0	0	0.56276	1	4585	4585		20.03	2.8637	1				29575	13978	19800	19810	33627	33627					0.13976431996775318
LLAPRWTG	8	Unmodified	_LLAPRWTG_					0	0	0		ENSG00000268480|ENST00000691075|NFILZ	ENSG00000268480|ENST00000691075|NFILZ	ENSG00000268480|ENST00000691075|NFILZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2638244628906	2	457.266345	912.518136	-1.1625	-0.00053158	-3.3651	-0.0015388	-4.5277	-0.0020703	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.87479	1	8051	8051		30.504	0	1	4732500			29576	8962	19801	19811	33628	33628					0.05837812342554116
LLAPTSVLI	9	Unmodified	_LLAPTSVLI_					0	0	0			REV__ENSG00000169562|ENST00000361726|GJB1	REV__ENSG00000169562|ENST00000361726|GJB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8005065917969	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3303	3303		13.775	0	1	942760	+		29577	21586	19802	19812	33629	33629					0.11905003113804469
LLAPVIISS	9	Unmodified	_LLAPVIISS_					0	0	0		ENST00000474873.5_1_10:100195027-100205113:-|nuORF;ENST00000467246.5_1_10:100191016-100205113:-|nuORF;nc|ENSG00000289758|Q92902-3|HPS1;nc|ENSG00000289758|Q92902-2|HPS1;ENSG00000107521|ENST00000361490|HPS1;ENST00000498219.5_1_10:100185741-100202985:-|nuORF;nc|ENSG00000289758|Q92902-4|HPS1	ENST00000474873.5_1_10:100195027-100205113:-|nuORF	ENST00000474873.5_1_10:100195027-100205113:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7930603027344	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.7932	1	1954	1954		12.959	0	1	3452400			29578	2348	19803	19813	33630	33630					0.10984716596760791
LLAQAEMR	8	Unmodified	_LLAQAEMR_					0	0	0			REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.25506591796875	2	466.25512	930.495686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.19	1	60.58	60.08	61.08	0.39077								0	0	0	0.29344	1	6375	6375		31.955	1.4512	1		+		29579	30256	19804	19814	33631	33631					0.027658448826286985
LLAQLGEIY	9	Unmodified	_LLAQLGEIY_					0	0	0			REV__ENSG00000129152|ENST00000250003|MYOD1	REV__ENSG00000129152|ENST00000250003|MYOD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2929382324219	2	510.292225	1018.5699	0.52665	0.00026874	-0.7009	-0.00035766	-0.17425	-8.8921E-05	510.2916631962966	53.865	0.79308	54.279	54.036	54.829	0.4139					33	18	3	0	0	0	0.18566	1	5456	5456		76.847	15.875	1	608780	+		29580	18806	19805	19815	33632	33632					0.06135511245804537
LLAQLGEIY	9	Unmodified	_LLAQLGEIY_					0	0	0			REV__ENSG00000129152|ENST00000250003|MYOD1	REV__ENSG00000129152|ENST00000250003|MYOD1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	510.292225	1018.5699	0.52665	0.00026874	-0.7009	-0.00035766	-0.17425	-8.8921E-05	510.2916631962966	53.865	0.79308	54.279	54.036	54.829	0.4139	0.0098582	-0.00034486	NaN	76.847	33	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	608780	+		29581	18806	19805	19815							0.06135511245804537
LLAQRATRP	9	Unmodified	_LLAQRATRP_					0	0	0			REV__ENST00000474787.1_1_9:139974763-139976621:+|nuORF;REV__nc|ENSG00000197355|Q3KQV9-2|UAP1L1	REV__nc|ENSG00000197355|Q3KQV9-2|UAP1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.31640625	2	513.314358	1024.61416	0.39078	0.00020059	4.0535	0.0020807	4.4443	0.0022813	513.3164630994114	53.539	1.8096	53.62	52.959	54.769	0.081528					78	48	3	0	0	0	0.74721	1	4360	4360		37.159	1.5408	1	262680	+		29582	27311;23221	19806	19816	33633	33633					0.10283960182664487
LLARAERE	8	Unmodified	_LLARAERE_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2785949707031	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.87064	1	8142	8142		29.15	0	1	2070000	+		29583	23503	19807	19817	33634	33634					0.06031992020314192
LLARARVQ	8	Unmodified	_LLARARVQ_					0	0	0			REV__ENST00000369649.8_1_X:153717326-153718941:-|nuORF	REV__ENST00000369649.8_1_X:153717326-153718941:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.7995300292969	2	463.798343	925.582134	0.28206	0.00013082	4.2188	0.0019567	4.5009	0.0020875	463.8001612881591	41.523	1.5134	41.492	41.236	42.75	-0.030991					87	37	3	0	0	0	0.86288	1	3130	3130		26.796	1.3459	1	527400	+		29584	24451	19808	19818	33635	33635					0.1163659249950797
LLARAWAPV	9	Unmodified	_LLARAWAPV_					0	0	0			REV__ENSG00000129749|ENST00000250699|CHRNA10	REV__ENSG00000129749|ENST00000250699|CHRNA10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8036804199219	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.7932	1	4604	4604		18.324	0	1	2118300	+		29585	18832	19809	19819	33636	33636					0.09366360785020333
LLARAWAPV	9	Unmodified	_LLARAWAPV_					0	0	0			REV__ENSG00000129749|ENST00000250699|CHRNA10	REV__ENSG00000129749|ENST00000250699|CHRNA10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.80389404296875	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.72402	1	4693	4693		38.806	3.6054	1	2702800	+		29586	18832	19809	19819	33637	33637					0.09366360785020333
LLARGGQV	8	Unmodified	_LLARGGQV_					0	0	0		ENST00000460031.5_1_1:43212370-43220777:-|nuORF	ENST00000460031.5_1_1:43212370-43220777:-|nuORF	ENST00000460031.5_1_1:43212370-43220777:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2574462890625	2	407.250695	812.486836	-1.8845	-0.00076748	1.3258	0.00053991	-0.55878	-0.00022756	407.2511680225101	49.816	0.69051	49.841	49.557	50.248	0.025574					23	17	2	0	0	0	0.4196	1	3864	3864		8.8223	0	1	59934			29587	12000	19810	19820	33638	33638					0.07309239308472115
LLARGRSSA	9	Unmodified	_LLARGRSSA_					0	0	0		nc|ENSG00000165671|Q96L73-3|NSD1;ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1	nc|ENSG00000165671|Q96L73-3|NSD1	nc|ENSG00000165671|Q96L73-3|NSD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.77764892578125	2	465.777608	929.540663	-0.69238	-0.0003225	0.76957	0.00035845	0.077191	3.5954E-05	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.7932	1	9555	9555		25.45	1.2474	1	927810			29588	6108	19811	19821	33639	33639					0.07307411740180214
LLARHPPI	8	Unmodified	_LLARHPPI_					0	0	0		chr2:187560873-187565550|14|20.43|0.0|20.96|-|2|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|7	chr2:187560873-187565550|14|20.43|0.0|20.96|-|2|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|7	chr2:187560873-187565550|14|20.43|0.0|20.96|-|2|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.7878112792969	2	458.789987	915.565421	-1.7492	-0.00080251	-3.6197	-0.0016607	-5.3689	-0.0024632	458.7883137610394	92.976	2.4972	93.168	92.52	95.017	0.19239					169	59	5	0	0	0	0.87276	1	9462	9462		29.842	1.5873	1	11606000			29589	319	19812	19822	33640	33640					0.10426091613555855
LLARICLPQ	9	Unmodified	_LLARICLPQ_					0	0	0			REV__ENSG00000160602|ENST00000268766|NEK8	REV__ENSG00000160602|ENST00000268766|NEK8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8084106445312	2	513.810062	1025.60557	-1.4174	-0.00072826	-0.72923	-0.00037469	-2.1466	-0.0011029	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.7932	1	4100	4100		21.96	0.25755	1	1977600	+		29590	20726	19813	19823	33641	33641					0.09379270221802471
LLARIWKP	8	Unmodified	_LLARIWKP_					0	0	0		nc|ENSG00000049247|O95399-2|UTS2;ENSG00000049247|ENST00000361696|UTS2	nc|ENSG00000049247|O95399-2|UTS2	nc|ENSG00000049247|O95399-2|UTS2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.8033752441406	2	498.821287	995.628021	-1.4698	-0.00073319	-0.68732	-0.00034285	-2.1572	-0.001076	498.81977298341627	51.964	0.19256	51.964	51.831	52.023	0					5	4	2	0	0	0	0.4196	1	4244	4244		26.796	0	1	30383			29591	14749	19814	19824	33642	33642					0.1300323768174394
LLARLPPMA	9	Unmodified	_LLARLPPMA_					0	0	0		ENST00000485975.1_1_9:139264538-139264880:-|nuORF	ENST00000485975.1_1_9:139264538-139264880:-|nuORF	ENST00000485975.1_1_9:139264538-139264880:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.3034362792969	2	491.29933	980.584108	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.58	1	108.6	108.1	109.1	0.020561								0	0	0	0.31472	1	11601	11601		25.45	7.1258	1				29592	12570	19815	19825	33643	33643					0.09303885193105543
LLARNLPW	8	Unmodified	_LLARNLPW_					0	0	0			REV__ENSG00000172967|ENST00000684488|XKR3	REV__ENSG00000172967|ENST00000684488|XKR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7958068847656	2	491.795269	981.575986	-0.86128	-0.00042357	1.3952	0.00068615	0.53392	0.00026258	491.79583711541846	45.285	1.262	45.254	44.708	45.97	-0.031067					74	28	3	0	0	0	0.81548	1	3677	3677		20.482	1.1219	1	480390	+		29593	21872	19816	19826	33644	33644					0.08446074267976655
LLARPRRPFPS	11	Unmodified	_LLARPRRPFPS_					0	0	0		ENSG00000176381|ENST00000322583|PRR18	ENSG00000176381|ENST00000322583|PRR18	ENSG00000176381|ENST00000322583|PRR18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26776123046875	3	437.266568	1308.77787	-0.73822	-0.0003228	3.7045	0.0016198	2.9662	0.001297	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.77511	1	4531	4531		16.53	0	1	3639500			29594	7073	19817	19827	33645	33645					0.13583557953529635
LLARPRRPFPS	11	Unmodified	_LLARPRRPFPS_					0	0	0		ENSG00000176381|ENST00000322583|PRR18	ENSG00000176381|ENST00000322583|PRR18	ENSG00000176381|ENST00000322583|PRR18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26788330078125	3	437.266568	1308.77787	0.31383	0.00013723	2.5449	0.0011128	2.8587	0.00125	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.75457	1	4398	4398		21.032	2.5012	1	2521600			29595	7073	19817	19827	33646	33646					0.13583557953529635
LLARPRRPFPS	11	Unmodified	_LLARPRRPFPS_					0	0	0		ENSG00000176381|ENST00000322583|PRR18	ENSG00000176381|ENST00000322583|PRR18	ENSG00000176381|ENST00000322583|PRR18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2677307128906	3	437.266568	1308.77787	1.1666	0.00051013	1.5125	0.00066137	2.6791	0.0011715	437.26715109542596	51.001	1.6388	51.753	50.881	52.52	0.75174					116	39	4	0	0	0	0.77511	1	5084	5084		16.53	1.1924	1	3280800			29596	7073	19817	19827	33647	33647					0.13583557953529635
LLARQILKPTG	11	Unmodified	_LLARQILKPTG_					0	0	0			REV__ENSG00000173327|ENST00000309100|MAP3K11	REV__ENSG00000173327|ENST00000309100|MAP3K11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.3904418945312	2	605.387522	1208.76049	0.95968	0.00058098	2.8271	0.0017115	3.7867	0.0022924	605.3891695017603	44.942	0.77081	44.954	44.509	45.28	0.012058					39	17	3	0	0	0	0.75121	1	3183	3183		18.262	2.6203	1	312690	+		29597	21915	19818	19828	33648	33648					0.16446217627890292
LLARQILKPTG	11	Unmodified	_LLARQILKPTG_					0	0	0			REV__ENSG00000173327|ENST00000309100|MAP3K11	REV__ENSG00000173327|ENST00000309100|MAP3K11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9293212890625	3	403.92744	1208.76049	0.5143	0.00020774	4.1381	0.0016715	4.6524	0.0018792	403.92898888715627	45.158	1.872	45.621	44.495	46.367	0.46313					165	45	4	0	0	0	0.77803	1	4207	4207		15.921	2.4127	1	5214800	+		29598	21915	19818	19828	33649	33649					0.16446217627890292
LLARQWPL	8	Unmodified	_LLARQWPL_					0	0	0			REV__ENST00000568591.5_1_16:2156634-2167660:-|nuORF	REV__ENST00000568591.5_1_16:2156634-2167660:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.8033752441406	2	498.803094	995.591636	-1.4653	-0.00073091	2.6111	0.0013024	1.1457	0.00057149	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.88915	1	4244	4244		35.201	4.6971	1	2964600	+		29599	28901	19819	19829	33650	33650					0.09366360785031702
LLARQWPL	8	Unmodified	_LLARQWPL_					0	0	0			REV__ENST00000568591.5_1_16:2156634-2167660:-|nuORF	REV__ENST00000568591.5_1_16:2156634-2167660:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.80523681640625	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.884	1	4633	4633		33.516	6.7195	1	2118300	+		29600	28901	19819	19829	33651	33651					0.09366360785031702
LLARQWPL	8	Unmodified	_LLARQWPL_					0	0	0			REV__ENST00000568591.5_1_16:2156634-2167660:-|nuORF	REV__ENST00000568591.5_1_16:2156634-2167660:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.803466796875	2	498.803094	995.591636	-0.601	-0.00029978	1.7229	0.00085937	1.1219	0.00055959	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.86791	2	4525	4525;4537		35.201	3.2459	1	2240900	+		29601	28901	19819	19829	33652;33653	33652					0.09366360785031702
LLARQWPL	8	Unmodified	_LLARQWPL_					0	0	0			REV__ENST00000568591.5_1_16:2156634-2167660:-|nuORF	REV__ENST00000568591.5_1_16:2156634-2167660:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8036193847656	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.82464	4	4477	4477;4627;4647;4679		35.201	8.5078	1	2702800	+		29602	28901	19819	19829	33654;33655;33656;33657	33654					0.09366360785031702
LLARQWPL	8	Unmodified	_LLARQWPL_					0	0	0			REV__ENST00000568591.5_1_16:2156634-2167660:-|nuORF	REV__ENST00000568591.5_1_16:2156634-2167660:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.8036804199219	2	498.803094	995.591636	-0.60409	-0.00030132	1.8273	0.00091145	1.2232	0.00061013	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.88915	1	4160	4160		35.201	0	1	2424700	+		29603	28901	19819	19829	33658	33658					0.09366360785031702
LLARVAGRRR	10	Unmodified	_LLARVAGRRR_					0	0	0		nc|ENSG00000090932|Q9NYJ7|DLL3;ENSG00000090932|ENST00000356433|DLL3;ENST00000600437.1_1_19:39989581-39996225:+|nuORF	nc|ENSG00000090932|Q9NYJ7|DLL3	nc|ENSG00000090932|Q9NYJ7|DLL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	584.3833618164062	2	584.380897	1166.74724	0.16362	9.5617E-05	2.6323	0.0015383	2.7959	0.0016339	584.381901319033	15.62	0.26945	15.677	15.548	15.817	0.057872					9	6	2	0	0	0	0.86718	1	56	56		27.882	2.3082	1	121110			29604	1661	19820	19830	33659	33659					0.17053824359163627
LLARVWVLCK	10	Unmodified	_LLARVWVLCK_					0	0	0		ENSG00000149930|ENST00000308893|TAOK2;nc|ENSG00000149930|Q9UL54-3|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2	ENSG00000149930|ENST00000308893|TAOK2	ENSG00000149930|ENST00000308893|TAOK2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.5830993652344	3	400.914366	1199.72127	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.98	1	116.9	116.4	117.4	-0.07531								0	0	0	0.45132	1	12553	12553		16.007	0	1				29605	5055	19821	19831	33660	33660					0.1293979407266761
LLASAAAFYY	10	Unmodified	_LLASAAAFYY_					0	0	0		nc|ENSG00000153485|Q8N6I4-2|LYSET;ENSG00000153485|ENST00000415050|LYSET;nc|ENSG00000153485|Q8N6I4-3|LYSET	nc|ENSG00000153485|Q8N6I4-2|LYSET	nc|ENSG00000153485|Q8N6I4-2|LYSET	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.2823486328125	2	545.2844	1088.55425	0.40007	0.00021815	-4.0572	-0.0022123	-3.6571	-0.0019942	545.281966123205	51.155	1.0609	51.205	50.922	51.983	0.049896					62	32	3	0	0	0	0.50394	1	4095	4095		55.504	10.973	1	1211600			29606	5235	19822	19832	33661	33661					0.013512247287508217
LLASDLRR	8	Unmodified	_LLASDLRR_					0	0	0			REV__ENST00000590836.1_1_17:41132593-41133163:+|nuORF	REV__ENST00000590836.1_1_17:41132593-41133163:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2875061035156	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.90465	1	12406	12406		40.573	10.069	1	3080300	+		29607	23402	19823	19833	33662	33662					0.08748582399982752
LLASIVSDL	9	Unmodified	_LLASIVSDL_					0	0	0			REV__nc|ENSG00000104774|O00754-2|MAN2B1;REV__ENST00000486847.2_1_19:12774617-12777525:-|nuORF	REV__nc|ENSG00000104774|O00754-2|MAN2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77801513671875	2	465.778951	929.543348	0.60386	0.00028126	-3.6343	-0.0016928	-3.0304	-0.0014115	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.77546	1	7656	7656		31.955	0	1	1082300	+		29608	17471;27560	19824	19834	33663	33663					0.07575822354453976
LLASLVLH	8	Unmodified	_LLASLVLH_					0	0	0			REV__CON__Q3SZV7	REV__CON__Q3SZV7	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	433.2552490234375	2	433.278921	864.543289	-0.96177	-0.00041672	-2.9801	-0.0012912	-3.9419	-0.0017079	433.2783658323042	107.26	0.4234	107.26	106.98	107.4	0					13	9	2	0	0	0	0.4196	1	11125	11125		23.037	0	1	114370	+	+	29609	16015	19825	19835	33664	33664					0.10559867145116186
LLASLVLH	8	Unmodified	_LLASLVLH_					0	0	0			REV__CON__Q3SZV7	REV__CON__Q3SZV7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	433.278921	864.543289	2.3697	0.0010267	6.2599	0.0027123	8.6296	0.003739	433.282925231021	106.97	0.38359	107	106.76	107.15	0.03688	-0.21493	0.0033107	NaN	23.037	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82056	+	+	29610	16015	19825	19835							0.10559867145116186
LLASLVLH	8	Unmodified	_LLASLVLH_					0	0	0			REV__CON__Q3SZV7	REV__CON__Q3SZV7	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	433.278921	864.543289	0.73486	0.0003184	5.624	0.0024367	6.3588	0.0027551	433.28149825157385	107.31	0.46018	107.4	107.3	107.76	0.091255	0.17656	0.0027596	NaN	23.037	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128330	+	+	29611	16015	19825	19835							0.10559867145116186
LLASPGVVS	9	Unmodified	_LLASPGVVS_					0	0	0			REV__ENST00000528560.2_1_11:71615063-71627290:-|nuORF	REV__ENST00000528560.2_1_11:71615063-71627290:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7515563964844	2	421.752736	841.490919	-1.7782	-0.00074997	0.91991	0.00038797	-0.85831	-0.000362	421.75218958440666	77.386	3.85	77.511	77.102	80.952	0.12485					260	132	4	0	0	0	0.76255	1	7271	7271		35.618	0	1	434130	+		29612	23890	19826	19836	33665	33665					0.06383284011531032
LLASPRAR	8	Unmodified	_LLASPRAR_					0	0	0		nc|ENSG00000162849|Q2KJY2-2|KIF26B;chr1:245511128-245540767|14|19.0|0.13|7.16|+|ENST00000366518|KIF26B,KIF26B;ENSG00000162849|ENST00000407071|KIF26B	nc|ENSG00000162849|Q2KJY2-2|KIF26B	nc|ENSG00000162849|Q2KJY2-2|KIF26B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7879943847656	2	442.277244	882.539935	0.1862	8.2352E-05	3.1689	0.0014015	3.3551	0.0014839	442.27955750728717	39.007	0.1533	39.096	38.991	39.145	0.088375					5	3	2	0	0	0	0.4196	1	2353	2353		19.36	0	1	46569			29613	46	19827	19837	33666	33666					0.09396617091124426
LLASSEWPE	9	Unmodified	_LLASSEWPE_					0	0	0		ENSG00000102699|ENST00000381989|PARP4	ENSG00000102699|ENST00000381989|PARP4	ENSG00000102699|ENST00000381989|PARP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.2535400390625	2	516.25584	1030.49713	0.032313	1.6682E-05	-4.4276	-0.0022858	-4.3953	-0.0022691	516.2534054882833	28.284	0.51297	28.244	27.926	28.439	-0.039907					17	10	2	0	0	0	0.5393	1	1412	1412		50.025	2.1089	1	26720			29614	2013	19828	19838	33667	33667					-0.016902425476018834
LLASTGRVE	9	Unmodified	_LLASTGRVE_					0	0	0			REV__ENST00000474430.5_1_1:155151285-155154671:+|nuORF	REV__ENST00000474430.5_1_1:155151285-155154671:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.3051452636719	2	473.271824	944.529095	-1.4051	-0.00066498	-0.2389	-0.00011307	-1.644	-0.00077805	473.27210020246713	45.61	0.44065	46.505	46.287	46.728	0.89542					15	10	2	0	0	0	0.20789	1	4291	4291		16.473	8.2419	1	177290	+		29615	20917	19829	19839	33668	33668					0.05461169926184084
LLATALKMN	9	Unmodified	_LLATALKMN_					0	0	0		ENSG00000104866|ENST00000221462|PPP1R37	ENSG00000104866|ENST00000221462|PPP1R37	ENSG00000104866|ENST00000221462|PPP1R37	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79132080078125	2	487.788795	973.563038	0.54993	0.00026825	3.015	0.0014707	3.565	0.001739	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.74721	1	8439	8439		37.159	5.2042	1	633420			29616	2158	19830	19840	33669	33669					0.07519875093578321
LLATKQKSNS	10	Unmodified	_LLATKQKSNS_					0	0	0		ENST00000267843.8_1_15:49715598-49716258:+|nuORF	ENST00000267843.8_1_15:49715598-49716258:+|nuORF	ENST00000267843.8_1_15:49715598-49716258:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.3327026367188	2	545.316763	1088.61897	0.166	9.0525E-05	0.13512	7.3681E-05	0.30112	0.00016421	545.3165988410263	97.375	1.4376	97.606	96.869	98.306	0.23103					62	33	2	0	0	0	0.37624	1	10163	10163		16.717	5.0815	1	131310			29617	9531	19831	19841	33670	33670					0.07820799534761136
LLATKSLSLFG	11	Unmodified	_LLATKSLSLFG_					0	0	0			REV__ENSG00000183826|ENST00000481247|BTBD9	REV__ENSG00000183826|ENST00000481247|BTBD9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.3436889648438	2	575.347532	1148.68051	-0.3799	-0.00021857	-2.6981	-0.0015524	-3.078	-0.0017709	575.3459117588899	98.957	2.3582	98.957	98.457	100.82	0					160	56	5	0	0	0	0.70737	1	10106	10106		30.318	0	1	2637800	+		29618	22631	19832	19842	33671	33671					0.1121173123403878
LLATLLPPL	9	Unmodified	_LLATLLPPL_					0	0	0		ENSG00000165684|ENST00000684778|SNAPC4	ENSG00000165684|ENST00000684778|SNAPC4	ENSG00000165684|ENST00000684778|SNAPC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	475.81890869140625	2	475.817879	949.621205	0.22693	0.00010798	2.8468	0.0013546	3.0737	0.0014625	475.8189428917028	39.452	0.91245	39.54	39.22	40.133	0.088371					31	23	2	0	0	0	0.7932	1	2428	2428		13.775	0.81615	1	70782			29619	6110	19833	19843	33672	33672					0.1443788001053008
LLATPIVVG	9	Unmodified	_LLATPIVVG_					0	0	0		ENSG00000095464|ENST00000371447|PDE6C	ENSG00000095464|ENST00000371447|PDE6C	ENSG00000095464|ENST00000371447|PDE6C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7867126464844	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.7932	2	2711	2711;2751		26.796	0	1	11085000			29620	1727	19834	19844	33673;33674	33673					0.11308733942337312
LLATPIVVG	9	Unmodified	_LLATPIVVG_					0	0	0		ENSG00000095464|ENST00000371447|PDE6C	ENSG00000095464|ENST00000371447|PDE6C	ENSG00000095464|ENST00000371447|PDE6C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7861328125	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.7932	1	2891	2891		12.959	0	1	15753000			29621	1727	19834	19844	33675	33675					0.11308733942337312
LLATQMLPL	9	Unmodified	_LLATQMLPL_					0	0	0			REV__ENST00000397661.6_1_19:13206376-13206544:+|nuORF	REV__ENST00000397661.6_1_19:13206376-13206544:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.3060302734375	2	500.298996	998.583439	0.74629	0.00037337	0.67279	0.0003366	1.4191	0.00070996	500.7972119176855	94.338	1.2646	94.502	94.087	95.351	0.16308					81	30	5	0	0	0	0.62081	1	9658	9658		45.952	8.7928	1	626530	+		29622	26173	19835	19845	33676	33676					0.08409045753398914
LLATRAEPL	9	Unmodified	_LLATRAEPL_					0	0	0			REV__ENST00000520731.1_1_5:153832004-153835585:+|nuORF	REV__ENST00000520731.1_1_5:153832004-153835585:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.2977600097656	2	492.297842	982.581131	-0.51073	-0.00025143	0.16757	8.2494E-05	-0.34316	-0.00016894	492.2977647758313	53.848	1.3804	54.432	53.872	55.253	0.58474					77	32	4	0	0	0	0.67345	1	5500	5500		42.396	0	1	1886000	+		29623	28108	19836	19846	33677	33677					0.08914333339930636
LLATSTLI	8	Unmodified	_LLATSTLI_					0	0	0			REV__nc|ENSG00000151553|Q5W0V3-2|FHIP2A;REV__ENSG00000158863|ENST00000289921|FHIP2B	REV__ENSG00000158863|ENST00000289921|FHIP2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.228271484375	2	416.262936	830.51132	0.99179	0.00041285	-1.0535	-0.00043854	-0.061715	-2.569E-05	416.26237813226044	50.377	0.69895	50.825	50.557	51.256	0.44761					21	16	2	0	0	0	0.4196	1	4920	4920		26.796	0	1	780950	+		29624	20626;20257	19837	19847	33678	33678					0.08928454671331565
LLATVPDE	8	Unmodified	_LLATVPDE_					0	0	0		ENSG00000137574|ENST00000260129|TGS1;ENST00000523948.5_1_8:56686169-56737149:+|nuORF	ENSG00000137574|ENST00000260129|TGS1	ENSG00000137574|ENST00000260129|TGS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	429.2356262207031	2	429.234376	856.454199	-0.18423	-7.9079E-05	3.2894	0.0014119	3.1052	0.0013329	429.2356552162288	63.259	2.3661	63.225	62.64	65.006	-0.03371					245	81	5	0	0	0	0.884	1	5985	5985		33.516	6.7195	1	5881100			29625	4215	19838	19848	33679	33679					0.02022987394957454
LLATVSLPL	9	Unmodified	_LLATVSLPL_					0	0	0			REV__nc|ENSG00000158296|Q8WWT9-2|SLC13A3	REV__nc|ENSG00000158296|Q8WWT9-2|SLC13A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.79974365234375	2	463.799686	925.584819	-1.356	-0.00062891	2.7368	0.0012693	1.3808	0.00064042	463.8008126700971	41.516	1.4901	41.52	41.125	42.615	0.003418					87	36	3	0	0	0	0.7932	1	3067	3067		21.96	0	1	533600	+		29626	16826	19839	19849	33680	33680					0.11905003113804469
LLATVSLPL	9	Unmodified	_LLATVSLPL_					0	0	0			REV__nc|ENSG00000158296|Q8WWT9-2|SLC13A3	REV__nc|ENSG00000158296|Q8WWT9-2|SLC13A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.79925537109375	2	463.799686	925.584819	0.23374	0.00010841	1.7317	0.00080317	1.9655	0.00091158	463.8003055874184	41.421	1.4891	41.495	41.009	42.498	0.073418					84	40	3	0	0	0	0.7932	1	2764	2764		23.042	4.7181	1	378670	+		29627	16826	19839	19849	33681	33681					0.11905003113804469
LLAVAIGAD	9	Unmodified	_LLAVAIGAD_					0	0	0		ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3	ENSG00000083520|ENST00000377767|DIS3	ENSG00000083520|ENST00000377767|DIS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.75244140625	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.7932	1	7225	7225		24.203	3.2558	1	423780			29628	1501	19840	19850	33682	33682					0.06383284011508294
LLAVAVVGP	9	Unmodified	_LLAVAVVGP_					0	0	0		ENST00000381858.5_1_9:4679709-4679820:+|nuORF	ENST00000381858.5_1_9:4679709-4679820:+|nuORF	ENST00000381858.5_1_9:4679709-4679820:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7749938964844	2	419.773471	837.53239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.057	1	52.034	51.534	52.534	-0.02343								0	0	0	0.2792	1	4585	4585		39.021	0	1				29629	10964	19841	19851	33683	33683					0.10712464770847419
LLAVAVVGP	9	Unmodified	_LLAVAVVGP_					0	0	0		ENST00000381858.5_1_9:4679709-4679820:+|nuORF	ENST00000381858.5_1_9:4679709-4679820:+|nuORF	ENST00000381858.5_1_9:4679709-4679820:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.77484130859375	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.78292	1	2780	2780		29.842	5.6388	1	9723800			29630	10964	19841	19851	33684	33684					0.10712464770847419
LLAVDRGR	8	Unmodified	_LLAVDRGR_					0	0	0		ENST00000373709.7_1_1:31898701-31899576:+|nuORF	ENST00000373709.7_1_1:31898701-31899576:+|nuORF	ENST00000373709.7_1_1:31898701-31899576:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2746276855469	2	450.274701	898.534849	0.49619	0.00022342	-0.76811	-0.00034586	-0.27192	-0.00012244	450.2742908789494	92.742	1.9986	93.189	92.476	94.475	0.44661					184	49	6	0	0	0	0.87922	1	11136	11136		31.955	4.0726	1	16577000			29631	10755	19842	19852	33685	33685					0.08152313228515595
LLAVDRGR	8	Unmodified	_LLAVDRGR_					0	0	0		ENST00000373709.7_1_1:31898701-31899576:+|nuORF	ENST00000373709.7_1_1:31898701-31899576:+|nuORF	ENST00000373709.7_1_1:31898701-31899576:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.77862548828125	2	450.274701	898.534849	1.3503	0.000608	-1.2216	-0.00055004	0.12873	5.7964E-05	450.2740515365266	114.53	1.1707	114.54	114.21	115.38	0.0094528					72	56	2	0	0	0	0.4196	1	13789	13789		8.2313	0	1	81332			29632	10755	19842	19852	33686	33686					0.08152313228515595
LLAVEPKI	8	Unmodified	_LLAVEPKI_					0	0	0			REV__nc|ENSG00000065150|O00410-2|IPO5	REV__nc|ENSG00000065150|O00410-2|IPO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7880859375	2	441.786579	881.558604	-1.2332	-0.00054481	3.5907	0.0015863	2.3575	0.0010415	441.7880163081002	41.793	3.3981	41.755	40.553	43.951	-0.038223					227	85	5	0	0	0	0.884	1	3109	3109		33.516	3.674	1	13573000	+		29633	16492	19843	19853	33687	33687					0.11308733942325944
LLAVEPKI	8	Unmodified	_LLAVEPKI_					0	0	0			REV__nc|ENSG00000065150|O00410-2|IPO5	REV__nc|ENSG00000065150|O00410-2|IPO5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7881774902344	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.86288	1	2896	2896		26.796	6.3143	1	10128000	+		29634	16492	19843	19853	33688	33688					0.11308733942325944
LLAVEPKI	8	Unmodified	_LLAVEPKI_					0	0	0			REV__nc|ENSG00000065150|O00410-2|IPO5	REV__nc|ENSG00000065150|O00410-2|IPO5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78759765625	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.81548	1	3301	3301		20.482	5.8177	1	448230	+		29635	16492	19843	19853	33689	33689					0.11308733942325944
LLAVFNFLFLI	11	Unmodified	_LLAVFNFLFLI_					0	0	0		ENSG00000165195|ENST00000333590|PIGA;nc|ENSG00000165195|P37287-3|PIGA;nc|ENSG00000165195|P37287-2|PIGA	ENSG00000165195|ENST00000333590|PIGA	ENSG00000165195|ENST00000333590|PIGA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26800537109375	3	437.268804	1308.78458	-1.7045	-0.00074531	-0.38375	-0.0001678	-2.0882	-0.00091311	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.76251	1	4248	4248		19.263	0	1	3449100			29636	6060	19844	19854	33690	33690					0.14254058061555952
LLAVFNFLFLI	11	Unmodified	_LLAVFNFLFLI_					0	0	0		ENSG00000165195|ENST00000333590|PIGA;nc|ENSG00000165195|P37287-3|PIGA;nc|ENSG00000165195|P37287-2|PIGA	ENSG00000165195|ENST00000333590|PIGA	ENSG00000165195|ENST00000333590|PIGA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2681579589844	3	437.268804	1308.78458	0.02954	1.2917E-05	-2.2827	-0.00099817	-2.2532	-0.00098526	437.26770833059527	48.1	1.3181	49.023	48.466	49.784	0.92315					115	32	4	0	0	0	0.68532	1	4611	4611		33.922	2.2874	1	3276900			29637	6060	19844	19854	33691	33691					0.14254058061555952
LLAVGPQRGPR	11	Unmodified	_LLAVGPQRGPR_					0	0	0		ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3535766601562	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.64498	2	10693	10623;10693		39.253	6.4404	1	61091000			29638	10487	19845	19855	33692;33693	33693					0.1186360713677459
LLAVGPQRGPR	11	Unmodified	_LLAVGPQRGPR_					0	0	0		ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3543090820312	2	582.354014	1162.69348	-0.84093	-0.00048972	-0.12395	-7.2182E-05	-0.96488	-0.0005619	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.65746	3	11089	11089;11193;11387		37.812	8.6415	1	77752000			29639	10487	19845	19855	33694;33695;33696	33694					0.1186360713677459
LLAVGPQRGPR	11	Unmodified	_LLAVGPQRGPR_					0	0	0		ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3534545898438	2	582.354014	1162.69348	3.1803	0.0018521	-4.2471	-0.0024733	-1.0667	-0.00062122	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.67493	3	11664	11402;11537;11664		35.618	3.6634	1	77008000			29640	10487	19845	19855	33697;33698;33699	33699					0.1186360713677459
LLAVGPQRGPR	11	Unmodified	_LLAVGPQRGPR_					0	0	0		ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.353515625	2	582.354014	1162.69348	0.15817	9.2113E-05	-1.1126	-0.00064794	-0.95444	-0.00055582	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.69995	1	11268	11268		31.53	4.8369	1	78004000			29641	10487	19845	19855	33700	33700					0.1186360713677459
LLAVGPQRGPR	11	Unmodified	_LLAVGPQRGPR_					0	0	0		ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.35400390625	2	582.354014	1162.69348	0.72245	0.00042072	-1.6748	-0.00097534	-0.95238	-0.00055462	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.6921	3	10884	10856;10884;11004		32.812	3.6424	1	132960000			29642	10487	19845	19855	33701;33702;33703	33702					0.1186360713677459
LLAVGPQRGPR	11	Unmodified	_LLAVGPQRGPR_					0	0	0		ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3536376953125	2	582.354014	1162.69348	0.88325	0.00051437	-1.8039	-0.0010505	-0.92067	-0.00053616	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.6921	1	11076	11076		32.812	2.4947	1	125340000			29643	10487	19845	19855	33704	33704					0.1186360713677459
LLAVGPQRGPR	11	Unmodified	_LLAVGPQRGPR_					0	0	0		ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.35498046875	2	582.354014	1162.69348	-1.3468	-0.00078429	0.41376	0.00024096	-0.93299	-0.00054333	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.6921	2	10819	10819;11051		32.812	10.233	1	120000000			29644	10487	19845	19855	33705;33706	33705					0.1186360713677459
LLAVGPQRGPR	11	Unmodified	_LLAVGPQRGPR_					0	0	0		ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	ENST00000361711.7_1_16:83998807-83998978:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3529052734375	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.65746	4	12690	12649;12690;12736;12743		37.812	8.6415	1	3937500			29645	10487	19845	19855	33707;33708;33709;33710	33708					0.1186360713677459
LLAVGRLVWH	10	Unmodified	_LLAVGRLVWH_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3539428710938	2	582.356025	1162.6975	-0.84092	-0.00048972	-3.5778	-0.0020836	-4.4187	-0.0025733	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.86201	1	11556	11556		24.203	0.68005	1	77752000	+		29646	16310	19846	19856	33711	33711					0.12265696630493039
LLAVGRLVWH	10	Unmodified	_LLAVGRLVWH_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3535766601562	2	582.356025	1162.6975	-1.3468	-0.00078434	-2.7668	-0.0016113	-4.1137	-0.0023956	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.777	4	12381	12359;12381;12486;12669		40.573	4.9543	1	3937500	+		29647	16310	19846	19856	33712;33713;33714;33715	33713					0.12265696630493039
LLAVGSPLL	9	Unmodified	_LLAVGSPLL_					0	0	0		ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7870178222656	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.7932	1	3536	3536		11.511	0	1	325400			29648	10333	19847	19857	33716	33716					0.11308733942325944
LLAVGSPLL	9	Unmodified	_LLAVGSPLL_					0	0	0		ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78802490234375	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.76996	1	3507	3507		33.516	0	1	493390			29649	10333	19847	19857	33717	33717					0.11308733942325944
LLAVGSPLL	9	Unmodified	_LLAVGSPLL_					0	0	0		ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7879333496094	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.67235	1	2695	2695		42.474	0	1	10128000			29650	10333	19847	19857	33718	33718					0.11308733942325944
LLAVGSPLL	9	Unmodified	_LLAVGSPLL_					0	0	0		ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78826904296875	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.72402	1	3148	3148		38.806	12.01	1	403970			29651	10333	19847	19857	33719	33719					0.11308733942325944
LLAVGSPLL	9	Unmodified	_LLAVGSPLL_					0	0	0		ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2312927246094	2	441.786579	881.558604	-0.55773	-0.0002464	2.4611	0.0010873	1.9034	0.00084089	441.7870710855354	45.144	1.4453	46.039	45.76	47.205	0.89542					57	35	3	0	0	0	0.20789	1	4259	4259		18.324	0.95945	1	908520			29652	10333	19847	19857	33720	33720					0.11308733942325944
LLAVGSPLL	9	Unmodified	_LLAVGSPLL_					0	0	0		ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	441.786579	881.558604	-1.07	-0.00047272	3.8257	0.0016901	2.7557	0.0012174	441.78807909009373	45.287	0.65419	45.75	45.428	46.082	0.46313	-0.14456	0.00024099	NaN	18.324	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	837350			29653	10333	19847	19857							0.11308733942325944
LLAVHRSS	8	Unmodified	_LLAVHRSS_					0	0	0			REV__ENST00000545320.1_1_11:60739240-60755419:+|nuORF	REV__ENST00000545320.1_1_11:60739240-60755419:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.78802490234375	2	441.761426	881.5083	-1.8981	-0.00083851	0.14812	6.5432E-05	-1.75	-0.00077308	441.76077213470586	38.933	0.29319	38.933	38.73	39.024	0					10	6	2	0	0	0	0.4196	1	2438	2438		38.806	10.924	1	36510	+		29654	28521	19848	19858	33721	33721					0.06280624337182417
LLAVHRSSD	9	Unmodified	_LLAVHRSSD_					0	0	0			REV__ENST00000545320.1_1_11:60739240-60755419:+|nuORF	REV__ENST00000545320.1_1_11:60739240-60755419:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	499.60943603515625	2	499.274898	996.535243	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.971	1	66.971	66.471	67.471	0								0	0	0	0.32039	1	5913	5913		44.117	4.864	1		+		29655	28521	19849	19859	33722	33722					0.036836881577073655
LLAVIKLL	8	Unmodified	_LLAVIKLL_					0	0	0		nc|ENSG00000112031|Q9UGC7-4|MTRF1L;nc|ENSG00000112031|Q9UGC7-2|MTRF1L;ENSG00000112031|ENST00000367233|MTRF1L;ENST00000482526.1_1_6:153319663-153323652:-|nuORF;ENST00000504731.1_1_4:189659580-189660645:+|nuORF	nc|ENSG00000112031|Q9UGC7-4|MTRF1L	nc|ENSG00000112031|Q9UGC7-4|MTRF1L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7881164550781	2	441.822964	881.631375	0.18595	8.2157E-05	-2.9827	-0.0013178	-2.7968	-0.0012357	441.8221200586531	38.923	0.51295	39.011	38.883	39.396	0.088375					18	13	2	0	0	0	0.4196	1	2384	2384		14.664	0	1	54480			29656	2628	19850	19860	33723	33723					0.1858248773575042
LLAVKLEP	8	Unmodified	_LLAVKLEP_					0	0	0		ENST00000480825.6_1_1:36937516-36938309:-|nuORF	ENST00000480825.6_1_1:36937516-36938309:-|nuORF	ENST00000480825.6_1_1:36937516-36938309:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.78790283203125	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.85277	1	3541	3541		25.45	4.9683	1	539980			29657	12447	19851	19861	33724	33724					0.11308733942314575
LLAVKLEP	8	Unmodified	_LLAVKLEP_					0	0	0		ENST00000480825.6_1_1:36937516-36938309:-|nuORF	ENST00000480825.6_1_1:36937516-36938309:-|nuORF	ENST00000480825.6_1_1:36937516-36938309:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78717041015625	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.92457	1	3041	3041		47.916	12.715	1	12523000			29658	12447	19851	19861	33725	33725					0.11308733942314575
LLAVKPEL	8	Unmodified	_LLAVKPEL_					0	0	0			REV__ENSG00000118412|ENST00000551025|CASP8AP2	REV__ENSG00000118412|ENST00000551025|CASP8AP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7872314453125	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.884	1	2743	2743		33.516	1.5607	1	11085000	+		29659	18308	19852	19862	33726	33726					0.11308733942325944
LLAVKPQVTRS	11	Unmodified	_LLAVKPQVTRS_					0	0	0		ENST00000602918.1_1_12:123849997-123850138:+|nuORF	ENST00000602918.1_1_12:123849997-123850138:+|nuORF	ENST00000602918.1_1_12:123849997-123850138:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.9226379394531	3	404.587195	1210.73976	0.19518	7.8965E-05	3.7752	0.0015274	3.9704	0.0016064	404.92321041064025	41.02	1.204	41.094	40.422	41.626	0.073414					55	39	2	0	0	0	0.75457	1	2660	2660		21.032	0.19508	1	249770			29660	14417	19853	19863	33727	33727					0.14281627248215045
LLAVLEEL	8	Unmodified	_LLAVLEEL_					0	0	0		ENST00000370571.6_1_1:86334469-86342833:-|nuORF	ENST00000370571.6_1_1:86334469-86342833:-|nuORF	ENST00000370571.6_1_1:86334469-86342833:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.274658203125	2	450.276044	898.537535	-1.1013	-0.00049589	-2.4615	-0.0011084	-3.5628	-0.0016043	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.82464	1	9353	9353		21.702	0	1	26247000			29661	10641	19854	19864	33728	33728					0.08420723842812095
LLAVLEEL	8	Unmodified	_LLAVLEEL_					0	0	0		ENST00000370571.6_1_1:86334469-86342833:-|nuORF	ENST00000370571.6_1_1:86334469-86342833:-|nuORF	ENST00000370571.6_1_1:86334469-86342833:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.273681640625	2	450.276044	898.537535	-1.0413	-0.00046886	-1.6916	-0.00076168	-2.7329	-0.0012305	450.2751780304547	97.596	1.8622	97.596	96.898	98.76	0					87	44	3	0	0	0	0.81548	1	9824	9824		20.482	0	1	262970			29662	10641	19854	19864	33729	33729					0.08420723842812095
LLAVLGPLD	9	Unmodified	_LLAVLGPLD_					0	0	0			REV__ENST00000395346.6_1_17:26897892-26898289:-|nuORF	REV__ENST00000395346.6_1_17:26897892-26898289:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.7835693359375	2	455.784036	909.553519	-1.7491	-0.00079722	3.2958	0.0015022	1.5467	0.00070496	455.78533618800145	42.014	1.5481	42.712	42.124	43.672	0.69754					60	38	2	0	0	0	0.7932	1	3754	3754		25.45	6.0902	1	3887800	+		29663	26106	19855	19865	33730	33730					0.09512430079701062
LLAVLPYRS	9	Unmodified	_LLAVLPYRS_					0	0	0			REV__ENSG00000100532|ENST00000216420|CGRRF1	REV__ENSG00000100532|ENST00000216420|CGRRF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.314697265625	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12958	12958		26.796	1.3459	1	4038100	+		29664	17201	19856	19866	33731	33731					0.10343210236646883
LLAVLTAYKQ	10	Unmodified	_LLAVLTAYKQ_					0	0	0		ENST00000504490.2_1_4:113279997-113280900:+|nuORF	ENST00000504490.2_1_4:113279997-113280900:+|nuORF	ENST00000504490.2_1_4:113279997-113280900:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.34033203125	2	560.342249	1118.66995	-0.40673	-0.00022791	-3.2012	-0.0017938	-3.608	-0.0020217	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.86763	1	10817	10817		26.693	0	1	60162000			29665	12905	19857	19867	33732	33732					0.11535748579581195
LLAVPNIILTN	11	Unmodified	_LLAVPNIILTN_					0	0	0		ENSG00000174944|ENST00000309170|P2RY14	ENSG00000174944|ENST00000309170|P2RY14	ENSG00000174944|ENST00000309170|P2RY14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.866455078125	2	590.868631	1179.72271	-0.76513	-0.00045209	-3.0712	-0.0018147	-3.8363	-0.0022667	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.63176	1	11214	11214		40.778	5.6261	1	54208000			29666	6975	19858	19868	33733	33733					0.14003706642415636
LLAVPNIILTN	11	Unmodified	_LLAVPNIILTN_					0	0	0		ENSG00000174944|ENST00000309170|P2RY14	ENSG00000174944|ENST00000309170|P2RY14	ENSG00000174944|ENST00000309170|P2RY14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8668212890625	2	590.868631	1179.72271	-1.319	-0.00077937	-2.4341	-0.0014383	-3.7532	-0.0022176	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.68378	1	11004	11004		34.173	9.6534	1	81379000			29667	6975	19858	19868	33734	33734					0.14003706642415636
LLAVRDPRL	9	Unmodified	_LLAVRDPRL_					0	0	0		ENSG00000237988|ENST00000641137|OR2I1P;nc|ENSG00000237988|Q8NGU4|OR2I1P	ENSG00000237988|ENST00000641137|OR2I1P	ENSG00000237988|ENST00000641137|OR2I1P	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.8306274414062	2	526.832383	1051.65021	-0.63369	-0.00033385	-1.7948	-0.00094557	-2.4285	-0.0012794	526.8314539429292	99.046	1.7562	99.046	98.528	100.28	0					92	42	3	0	0	0	0.7932	1	9986	9986		23.042	1.0826	1	488410			29668	8763	19859	19869	33735	33735					0.12645417359499334
LLAVRFHYT	9	Unmodified	_LLAVRFHYT_					0	0	0			REV__nc|ENSG00000124920|Q9Y2G1-2|MYRF	REV__nc|ENSG00000124920|Q9Y2G1-2|MYRF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3404541015625	2	560.319109	1118.62366	2.8735	0.0016101	-1.8693	-0.0010474	1.0043	0.00056272	560.3181530814165	102	0.29601	102.33	102.24	102.54	0.32511					8	6	2	0	0	0	0.20789	1	12431	12431		31.955	0	1	75663	+		29669	18622	19860	19870	33736	33736					0.06909728468190224
LLAVRMTI	8	Unmodified	_LLAVRMTI_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7872314453125	2	458.786056	915.557558	-1.1208	-0.00051419	4.2526	0.001951	3.1318	0.0014368	458.7879776925229	92.908	3.5156	93.134	92.238	95.754	0.22548					221	84	5	0	0	0	0.88915	1	9413	9413		35.201	1.6851	1	15931000	+		29670	30102	19861	19871	33737	33737					0.09640196301768356
LLAVRVFNT	9	Unmodified	_LLAVRVFNT_					0	0	0		ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.316162109375	2	516.813659	1031.61277	2.4596	0.0012711	0.2886	0.00014915	2.7482	0.0014203	516.8141499405319	112.96	0.12437	112.99	112.93	113.05	0.030594					7	4	2	0	0	0	0.20789	1	13658	13658		16.473	1.6083	1	43922			29671	7479	19862	19872	33738	33738					0.09822326093899392
LLAVRVFNT	9	Unmodified	_LLAVRVFNT_					0	0	0		ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	516.813659	1031.61277	-1.5602	-0.00080634	3.3634	0.0017383	1.8032	0.00093192	517.3170404262914	112.94	0.10223	112.9	112.81	112.91	-0.032333	-0.044129	0.0015927	NaN	16.473	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10268			29672	7479	19862	19872							0.09822326093899392
LLAVTGKKTT	10	Unmodified	_LLAVTGKKTT_					0	0	0		nc|ENSG00000067955|Q13951|CBFB	nc|ENSG00000067955|Q13951|CBFB	nc|ENSG00000067955|Q13951|CBFB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.314208984375	2	516.326599	1030.63865	1.8822	0.00097185	2.1428	0.0011064	4.025	0.0020782	516.32734431431	98.715	0.23976	99.076	98.976	99.216	0.36136					6	5	2	0	0	0	0.37624	1	11896	11896		27.882	0	1	102290			29673	14768	19863	19873	33739	33739					0.12455175545505881
LLAVTLPSI	9	Unmodified	_LLAVTLPSI_					0	0	0		nc|ENSG00000168936|A0AVI4-2|TMEM129;ENSG00000168936|ENST00000382936|TMEM129	nc|ENSG00000168936|A0AVI4-2|TMEM129	nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8003845214844	2	463.799686	925.584819	0.22161	0.00010278	1.3447	0.00062365	1.5663	0.00072643	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.7932	1	3296	3296		21.96	1.4781	1	1570500			29674	6454	19864	19874	33740	33740					0.11905003113804469
LLAVTLTVP	9	Unmodified	_LLAVTLTVP_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8002624511719	2	463.799686	925.584819	0.22161	0.00010278	1.3447	0.00062365	1.5663	0.00072643	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.78536	1	3431	3431		29.15	0	1	1570500			29675	830	19865	19875	33741	33741					0.119050031137931
LLAVTLTVP	9	Unmodified	_LLAVTLTVP_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.7996520996094	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.7932	1	3658	3658		18.324	3.6603	1	269820			29676	830	19865	19875	33742	33742					0.119050031137931
LLAVTLTVP	9	Unmodified	_LLAVTLTVP_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.80023193359375	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.78058	3	3556	3374;3477;3556		30.504	6.0902	1	1294000			29677	830	19865	19875	33743;33744;33745	33745					0.119050031137931
LLAVTLTVP	9	Unmodified	_LLAVTLTVP_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8003845214844	2	463.799686	925.584819	-1.356	-0.00062891	2.7368	0.0012693	1.3808	0.00064042	463.8008126700971	41.516	1.4901	41.52	41.125	42.615	0.003418					87	36	3	0	0	0	0.7932	1	3091	3091		24.203	5.8783	1	533600			29678	830	19865	19875	33746	33746					0.119050031137931
LLAVTLTVP	9	Unmodified	_LLAVTLTVP_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8003845214844	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.78058	1	3448	3448		30.504	5.0535	1	1516700			29679	830	19865	19875	33747	33747					0.119050031137931
LLAVTLTVP	9	Unmodified	_LLAVTLTVP_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8008117675781	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	2947	2947		12.959	0.75233	1	1231300			29680	830	19865	19875	33748	33748					0.119050031137931
LLAVTLTVP	9	Unmodified	_LLAVTLTVP_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8005065917969	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.78536	3	3133	3059;3133;3166		29.15	4.9468	1	1091400			29681	830	19865	19875	33749;33750;33751	33750					0.119050031137931
LLAVTLTVP	9	Unmodified	_LLAVTLTVP_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7999267578125	2	463.799686	925.584819	-1.9529	-0.00090576	3.5624	0.0016523	1.6095	0.0007465	463.801178460678	42.067	1.8831	42.764	41.947	43.83	0.69754					154	47	4	0	0	0	0.69914	1	3739	3739		40.573	1.7665	1	6253400			29682	830	19865	19875	33752	33752					0.119050031137931
LLAVTLTVP	9	Unmodified	_LLAVTLTVP_					0	0	0		nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	nc|ENSG00000017483|Q8WUX1-2|SLC38A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7996520996094	2	463.799686	925.584819	-1.7825	-0.00082674	2.099	0.0009735	0.31643	0.00014676	463.800390617057	43.686	0.88522	44.46	43.907	44.792	0.7738					50	21	3	0	0	0	0.7932	1	4013	4013		17.365	3.5896	1	994260			29683	830	19865	19875	33753	33753					0.119050031137931
LLAVTPEL	8	Unmodified	_LLAVTPEL_					0	0	0			REV__ENSG00000163507|ENST00000295746|CIP2A	REV__ENSG00000163507|ENST00000295746|CIP2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2614440917969	2	428.262936	854.51132	-1.6655	-0.00071328	-1.2622	-0.00054056	-2.9277	-0.0012538	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.87276	1	9041	9041		29.842	0	1	44776000	+		29684	20925	19866	19876	33754	33754					0.07824454671310832
LLAVTSLPP	9	Unmodified	_LLAVTSLPP_					0	0	0		ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.7850036621094	2	455.784036	909.553519	0.22092	0.00010069	1.0481	0.00047773	1.2691	0.00057842	455.78429383584523	43.788	2.2099	43.762	42.925	45.135	-0.026768					87	51	2	0	0	0	0.7932	1	3375	3375		26.796	2.5934	1	242760			29685	13530	19867	19877	33755	33755					0.09512430079701062
LLAVTSLPP	9	Unmodified	_LLAVTSLPP_					0	0	0		ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.7843322753906	2	455.784036	909.553519	-1.2569	-0.00057288	2.8694	0.0013078	1.6125	0.00073494	455.78522720735987	43.749	1.8731	43.758	43.065	44.938	0.0084534					75	44	2	0	0	0	0.7932	1	3055	3055		24.203	5.8783	1	212800			29686	13530	19867	19877	33756	33756					0.09512430079701062
LLAVTSLPP	9	Unmodified	_LLAVTSLPP_					0	0	0		ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.78460693359375	2	455.784036	909.553519	-0.1802	-8.2133E-05	1.6797	0.00076557	1.4995	0.00068343	455.7846366221301	43.666	1.1994	43.616	42.896	44.095	-0.050308					47	28	2	0	0	0	0.7932	1	3029	3029		19.36	0	1	227320			29687	13530	19867	19877	33757	33757					0.09512430079701062
LLAVVTGLP	9	Unmodified	_LLAVVTGLP_					0	0	0			REV__nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10	REV__nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7879333496094	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.7932	1	2971	2971		25.45	0	1	11085000	+		29688	30238	19868	19878	33758	33758					0.11308733942325944
LLAWVIVF	8	Unmodified	_LLAWVIVF_					0	0	0		ENSG00000011083|ENST00000230671|SLC6A7	ENSG00000011083|ENST00000230671|SLC6A7	ENSG00000011083|ENST00000230671|SLC6A7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8008728027344	2	480.799489	959.584425	-0.87555	-0.00042097	4.1782	0.0020089	3.3026	0.0015879	480.80141229635706	99.415	2.4533	99.415	98.234	100.69	0					106	59	2	0	0	0	0.84567	1	9953	9953		24.504	0	1	116320			29689	778	19869	19879	33759	33759					0.1030162818460667
LLCEGYGT	8	Unmodified	_LLCEGYGT_					0	0	0			REV__nc|ENSG00000163638|Q9P2N4-2|ADAMTS9	REV__nc|ENSG00000163638|Q9P2N4-2|ADAMTS9	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.26153564453125	2	428.199479	854.384405	-1.1372	-0.00048694	-3.9013	-0.0016705	-5.0385	-0.0021575	428.1962972542933	91.175	0.60994	91.175	90.734	91.344	0					20	14	2	0	0	0	0.4196	1	8856	8856		60.294	23.265	1	41750	+		29690	20952	19870	19880	33760	33760					-0.04861214545303483
LLCEGYGT	8	Unmodified	_LLCEGYGT_					0	0	0			REV__nc|ENSG00000163638|Q9P2N4-2|ADAMTS9	REV__nc|ENSG00000163638|Q9P2N4-2|ADAMTS9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.26153564453125	2	428.199479	854.384405	-1.667	-0.00071381	-4.1652	-0.0017835	-5.8322	-0.0024973	428.1972075705879	90.625	0.39212	90.842	90.591	90.983	0.21736					14	9	3	0	0	0	0.4196	1	9076	9076		52.299	9.903	1	142410	+		29691	20952	19870	19880	33761	33761					-0.04861214545303483
LLCKDVKV	8	Carbamidomethyl (C)	_LLC(Carbamidomethyl (C))KDVKV_	LLC(1)KDVKV		LLC(53)KDVKV		0	1	0			REV__nc|ENSG00000169347|P55259-4|GP2	REV__nc|ENSG00000169347|P55259-4|GP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7909851074219	2	487.788795	973.563038	-0.71212	-0.00034736	4.1832	0.0020405	3.4711	0.0016932	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.93786	1	7767	7767		53.351	8.8204	1	678280	+		29692	21573	19871	19881	33762	33762	265				0.0751987509358969
LLCLKKCVR	9	Unmodified	_LLCLKKCVR_					0	0	0		ENST00000420115.6_2_3:133306228-133306333:+|nuORF	ENST00000420115.6_2_3:133306228-133306333:+|nuORF	ENST00000420115.6_2_3:133306228-133306333:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3267211914062	2	538.327565	1074.64058	1.819	0.00097923	-2.4654	-0.0013272	-0.64636	-0.00034795	538.3260498932563	114	1.0045	114.02	113.22	114.22	0.02002					53	44	2	0	0	0	0.7932	1	13713	13713		24.203	2.2429	1	61058			29693	11446	19872	19882	33763	33763					0.10624189758118519
LLCLTWLL	8	Unmodified	_LLCLTWLL_					0	0	0			REV__ENSG00000172938|ENST00000309106|MRGPRD	REV__ENSG00000172938|ENST00000309106|MRGPRD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79144287109375	2	487.790807	973.56706	-1.4525	-0.00070854	0.77341	0.00037726	-0.67914	-0.00033128	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.87276	1	7785	7785		29.842	0	1	503530	+		29694	21868	19873	19883	33764	33764					0.07921964587308139
LLCRLLRWAR	10	Unmodified	_LLCRLLRWAR_					0	0	0			REV__ENST00000440097.5_1_3:45636669-45636975:+|nuORF	REV__ENST00000440097.5_1_3:45636669-45636975:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.2906799316406	3	433.932531	1298.77576	0.18927	8.2129E-05	3.1636	0.0013728	3.3529	0.0014549	433.93371086937594	76.71	0.92551	77.11	76.616	77.541	0.39969					57	28	3	0	0	0	0.37624	1	8691	8691		20.837	0	1	644040	+		29695	26737	19874	19884	33765	33765					0.13832805944116444
LLCRLLRWAR	10	Unmodified	_LLCRLLRWAR_					0	0	0			REV__ENST00000440097.5_1_3:45636669-45636975:+|nuORF	REV__ENST00000440097.5_1_3:45636669-45636975:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.2912902832031	3	433.932531	1298.77576	0.21325	9.2534E-05	3.1161	0.0013522	3.3294	0.0014447	433.933713220244	76.542	0.85453	77.111	76.599	77.453	0.56836					59	26	3	0	0	0	0.37624	1	8711	8711		33.922	10.407	1	599500	+		29696	26737	19874	19884	33766	33766					0.13832805944116444
LLCRMFLY	8	Unmodified	_LLCRMFLY_					0	0	0			REV__ENST00000427755.2_1_11:33037501-33047701:+|nuORF	REV__ENST00000427755.2_1_11:33037501-33047701:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.7788696289062	2	529.779916	1057.54528	-0.33938	-0.0001798	-0.4584	-0.00024285	-0.79778	-0.00042265	529.7795579963132	64.39	0.96629	64.417	63.833	64.799	0.027145					56	25	3	0	0	0	0.9159	1	6054	6054		44.531	0.15388	1	324740	+		29697	26571	19875	19885	33767	33767					0.01880836567102051
LLCSAAEILL	10	Unmodified	_LLCSAAEILL_					0	0	0		ENST00000406733.1_1_22:47170095-47170131:+|nuORF	ENST00000406733.1_1_22:47170095-47170131:+|nuORF	ENST00000406733.1_1_22:47170095-47170131:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.30419921875	2	523.301736	1044.58892	-0.178	-9.3149E-05	3.4267	0.0017932	3.2487	0.0017	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.85934	1	8288	8288		35.618	2.8059	1	4158500			29698	11275	19876	19886	33768	33768					0.06840724545213561
LLCSSLILLG	10	Unmodified	_LLCSSLILLG_					0	0	0			REV__ENST00000380559.7_1_9:18706652-18908543:+|nuORF	REV__ENST00000380559.7_1_9:18706652-18908543:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3136596679688	2	516.312103	1030.60965	-0.047196	-2.4368E-05	3.3567	0.0017331	3.3095	0.0017087	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.81018	1	10869	10869		38.806	5.9937	1	63062000	+		29699	25948	19877	19887	33769	33769					0.09557314924882121
LLCVFGPYF	9	Unmodified	_LLCVFGPYF_					0	0	0			REV__nc|ENSG00000184939|Q8TF47-3|ZFP90	REV__nc|ENSG00000184939|Q8TF47-3|ZFP90	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.7706298828125	2	529.772614	1057.53067	-0.78284	-0.00041473	-2.6939	-0.0014272	-3.4768	-0.0018419	529.7708561271895	67.269	0.86028	67.321	67.009	67.869	0.052376					76	31	4	0	0	0	0.72098	1	6031	6031		39.021	10.767	1	630540	+		29700	30097	19878	19888	33770	33770					0.004210876905972327
LLCVLRVYFL	10	Unmodified	_LLCVLRVYFL_					0	0	0		ENST00000232564.7_1_3:179118669-179118753:-|nuORF	ENST00000232564.7_1_3:179118669-179118753:-|nuORF	ENST00000232564.7_1_3:179118669-179118753:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8694458007812	2	619.87012	1237.72569	0.62564	0.00038782	-1.6996	-0.0010535	-1.0739	-0.00066569	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.8488	1	10277	10277		17.365	2.5001	1	4779100			29701	9218	19879	19889	33771	33771					0.11633258495589871
LLDARLQVLFR	11	Unmodified	_LLDARLQVLFR_					0	0	0			REV__nc|ENSG00000103150|O95822-2|MLYCD	REV__nc|ENSG00000103150|O95822-2|MLYCD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.610107421875	3	448.610111	1342.8085	-1.309	-0.00058724	-0.26888	-0.00012062	-1.5779	-0.00070786	448.60976401690687	76.777	1.1377	76.902	76.414	77.552	0.12485					110	49	3	0	0	0	0.79476	1	7221	7221		12.433	0	1	879130	+		29702	17391	19880	19890	33772	33772					0.15081291547903675
LLDARLQVLFR	11	Unmodified	_LLDARLQVLFR_					0	0	0			REV__nc|ENSG00000103150|O95822-2|MLYCD	REV__nc|ENSG00000103150|O95822-2|MLYCD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.30816650390625	3	448.610111	1342.8085	0.024247	1.0877E-05	-1.628	-0.00073033	-1.6037	-0.00071946	448.6090389587447	79.391	1.486	79.941	78.938	80.424	0.54945					61	34	3	0	0	0	0.17521	1	9174	9174		22.562	0	1	186170	+		29703	17391	19880	19890	33773	33773					0.15081291547903675
LLDARREKKWL	11	Unmodified	_LLDARREKKWL_					0	0	0			REV__ENST00000379953.6_1_6:6626634-6649885:+|nuORF	REV__ENST00000379953.6_1_6:6626634-6649885:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.62420654296875	3	476.620899	1426.84087	0.77996	0.00037175	4.338	0.0020676	5.118	0.0024393	476.6229627808848	113.88	0.26474	113.94	113.86	114.12	0.063232					15	10	3	0	0	0	0.77205	1	12192	12192		17.167	0.63689	1	1308200	+		29704	25933	19881	19891	33774	33774					0.1445207895094427
LLDARREKKWL	11	Unmodified	_LLDARREKKWL_					0	0	0			REV__ENST00000379953.6_1_6:6626634-6649885:+|nuORF	REV__ENST00000379953.6_1_6:6626634-6649885:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	476.620899	1426.84087	0.77996	0.00037175	4.338	0.0020676	5.118	0.0024393	476.6229627808848	113.88	0.26474	113.94	113.86	114.12	0.063232	0	0	NaN	17.167	15	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1308200	+		29705	25933	19881	19891							0.1445207895094427
LLDAVGLVL	9	Unmodified	_LLDAVGLVL_					0	0	0		ENSG00000263429|ENST00000581851|TMEM238L	ENSG00000263429|ENST00000581851|TMEM238L	ENSG00000263429|ENST00000581851|TMEM238L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7923278808594	2	456.791861	911.569169	-2.1986	-0.0010043	3.4286	0.0015662	1.23	0.00056186	456.7933193778514	39.928	2.2	40.296	39.048	41.248	0.36797					193	55	5	0	0	0	0.7932	1	3237	3237		24.203	0	1	10973000			29706	8938	19882	19892	33775	33775					0.10984716596760791
LLDFKKRLIPN	11	Unmodified	_LLDFKKRLIPN_					0	0	0		ENST00000309720.9_1_X:119393056-119393188:-|nuORF	ENST00000309720.9_1_X:119393056-119393188:-|nuORF	ENST00000309720.9_1_X:119393056-119393188:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.9481506347656	3	452.950245	1355.82891	-0.13654	-6.1846E-05	-3.9622	-0.0017947	-4.0988	-0.0018565	452.9483614950571	107.37	0.93114	107.33	106.73	107.66	-0.034409					72	21	5	0	0	0	0.75121	1	11686	11686		21.78	0.74819	1	2765200			29707	9900	19883	19893	33776	33776					0.16522462207763056
LLDFKKRLIPN	11	Unmodified	_LLDFKKRLIPN_					0	0	0		ENST00000309720.9_1_X:119393056-119393188:-|nuORF	ENST00000309720.9_1_X:119393056-119393188:-|nuORF	ENST00000309720.9_1_X:119393056-119393188:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.9482116699219	3	452.950245	1355.82891	-1.1932	-0.00054047	-3.3468	-0.0015159	-4.54	-0.0020564	452.9486366147782	106.8	1.2296	106.95	106.47	107.7	0.14843					124	29	6	0	0	0	0.69071	2	11530	11475;11530		33.039	10.478	1	8171700			29708	9900	19883	19893	33777;33778	33778					0.16522462207763056
LLDGKLVLL	9	Unmodified	_LLDGKLVLL_					0	0	0		ENST00000602101.6_1_19:15568751-15575169:-|nuORF;nc|ENSG00000105122|Q86YV0-2|RASAL3;ENSG00000105122|ENST00000343625|RASAL3	ENST00000602101.6_1_19:15568751-15575169:-|nuORF;nc|ENSG00000105122|Q86YV0-2|RASAL3	nc|ENSG00000105122|Q86YV0-2|RASAL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.3285217285156	2	492.328611	982.642668	-0.29778	-0.00014661	0.50865	0.00025042	0.21088	0.00010382	492.32871788740124	77.995	0.65375	78.401	78.101	78.754	0.40531					36	15	3	0	0	0	0.07589	2	8897	8897;8910		98.629	8.2596	1	724880			29709	2185;14398	19884	19894	33779;33780	33779					0.1506526503923169
LLDGKLVLL	9	Unmodified	_LLDGKLVLL_					0	0	0		ENST00000602101.6_1_19:15568751-15575169:-|nuORF;nc|ENSG00000105122|Q86YV0-2|RASAL3;ENSG00000105122|ENST00000343625|RASAL3	ENST00000602101.6_1_19:15568751-15575169:-|nuORF;nc|ENSG00000105122|Q86YV0-2|RASAL3	nc|ENSG00000105122|Q86YV0-2|RASAL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.32916259765625	2	492.328611	982.642668	-0.24786	-0.00012203	0.24858	0.00012238	0.00071754	3.5327E-07	492.32861412898853	77.835	0.69235	78.399	78.134	78.826	0.56332					38	16	3	0	0	0	0.065196	3	8900	8900;8912;8924		101.6	5.4559	1	821050			29710	2185;14398	19884	19894	33781;33782;33783	33781					0.1506526503923169
LLDIHTGG	8	Unmodified	_LLDIHTGG_					0	0	0			REV__ENSG00000168143|ENST00000306858|FAM83B	REV__ENSG00000168143|ENST00000306858|FAM83B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2380676269531	2	413.226885	824.439217	-1.8329	-0.0007574	-2.9551	-0.0012211	-4.788	-0.0019785	413.2250054125254	77.689	0.067261	77.814	77.775	77.842	0.12485					4	2	2	0	0	0	0.4196	1	7300	7300		26.796	1.3459	1	28122	+		29711	21466	19885	19895	33784	33784					0.019975403176204054
LLDKIIALKEI	11	Unmodified	_LLDKIIALKEI_					0	0	0			REV__ENST00000496726.5_1_3:25760898-25760961:-|nuORF	REV__ENST00000496726.5_1_3:25760898-25760961:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8926391601562	2	634.913039	1267.81152	-0.13149	-8.3487E-05	3.589	0.0022787	3.4575	0.0021952	634.9152782835155	105.54	0.25593	105.52	105.37	105.62	-0.014809					8	5	3	0	0	0	0.17415	1	11433	11433		41.427	18.847	1	87623	+		29712	27755	19886	19896	33785	33785					0.1883312188203945
LLDKKCYI	8	Unmodified	_LLDKKCYI_					0	0	0			REV__ENSG00000136002|ENST00000409359|ARHGEF4	REV__ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.283935546875	2	498.283346	994.552139	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.086	1	67.471	66.971	67.971	0.38515								0	0	0	0.30045	1	7337	7337		40.573	7.057	1		+		29713	19279	19887	19897	33786	33786					0.05464472719290825
LLDKLGPL	8	Unmodified	_LLDKLGPL_					0	0	0			REV__nc|ENSG00000173120|Q9Y2K7-2|KDM2A	REV__nc|ENSG00000173120|Q9Y2K7-2|KDM2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2996520996094	2	434.778754	867.542954	0.19757	8.5898E-05	2.8449	0.0012369	3.0424	0.0013228	434.779969129861	68.669	1.6606	69.054	68.149	69.809	0.38483					54	39	2	0	0	0	0.4196	1	7572	7572		19.36	0	1	96218	+		29714	21890	19888	19898	33787	33787					0.10388447425270897
LLDKLGPL	8	Unmodified	_LLDKLGPL_					0	0	0			REV__nc|ENSG00000173120|Q9Y2K7-2|KDM2A	REV__nc|ENSG00000173120|Q9Y2K7-2|KDM2A	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.4554	-0.00063279	4.8362	0.0021027	3.3807	0.0014699	434.7806976438083	69.224	0.63393	69.224	68.952	69.586	0	-0.045549	0.00098633	NaN	17.365	49	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68070	+		29715	21890	19888	19898							0.10388447425270897
LLDKLGPL	8	Unmodified	_LLDKLGPL_					0	0	0			REV__nc|ENSG00000173120|Q9Y2K7-2|KDM2A	REV__nc|ENSG00000173120|Q9Y2K7-2|KDM2A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	434.778754	867.542954	0.45067	0.00019594	3.1366	0.0013637	3.5873	0.0015597	434.7798078330844	69.401	0.70684	69.53	68.881	69.588	0.1291	0.26105	-0.00049156	NaN	17.365	49	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103430	+		29716	21890	19888	19898							0.10388447425270897
LLDKLKASAP	10	Unmodified	_LLDKLKASAP_					0	0	0		ENST00000585492.1_1_19:55556444-55565151:-|nuORF;nc|ENSG00000160439|Q8NBN7-2|RDH13;ENSG00000160439|ENST00000415061|RDH13	ENST00000585492.1_1_19:55556444-55565151:-|nuORF	ENST00000585492.1_1_19:55556444-55565151:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.6737060546875	2	528.326599	1054.63865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.877	1	68.877	68.377	69.377	0								0	0	0	0.45132	1	6127	6127		41.427	7.2541	1				29717	5587	19889	19899	33788	33788					0.11351175545519254
LLDKVPKIPKG	11	Unmodified	_LLDKVPKIPKG_					0	0	0			REV__nc|ENSG00000204410|O43196-4|MSH5	REV__nc|ENSG00000204410|O43196-4|MSH5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.365966796875	2	604.392273	1206.76999	-0.12353	-7.4658E-05	-2.7153	-0.0016411	-2.8389	-0.0017158	604.3881326873445	104.57	0.53894	104.61	104.09	104.63	0.039856					17	12	2	0	0	0	0.17245	1	11323	11323		37.812	30.121	1	239320	+		29718	23490	19890	19900	33789	33789					0.17487985913385273
LLDLGQRNQL	10	Unmodified	_LLDLGQRNQL_					0	0	0			REV__chr2:187560873-187565550|14|20.43|0.0|20.96|-|1|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|9	REV__chr2:187560873-187565550|14|20.43|0.0|20.96|-|1|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|9	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.8699951171875	2	585.335487	1168.65642	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.07	1	113	112.5	113.5	-0.067215								0	0	0	0.45132	1	12273	12273		15.642	2.6826	1		+		29719	15742	19891	19901	33790	33790					0.07883890800371773
LLDLIKGIRYL	11	Unmodified	_LLDLIKGIRYL_					0	0	0		ENSG00000132518|ENST00000254854|GUCY2D	ENSG00000132518|ENST00000254854|GUCY2D	ENSG00000132518|ENST00000254854|GUCY2D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25543212890625	3	439.614862	1315.82276	-0.85606	-0.00037634	-2.6379	-0.0011597	-3.494	-0.001536	439.9479048819243	56.735	1.0676	57.132	56.632	57.699	0.39672					40	24	2	0	0	0	0.17305	1	5858	5858		37.508	15.728	1	232540			29720	3804	19892	19902	33791	33791					0.1774794397624646
LLDLVFLLD	9	Unmodified	_LLDLVFLLD_					0	0	0		ENSG00000110799|ENST00000261405|VWF	ENSG00000110799|ENST00000261405|VWF	ENSG00000110799|ENST00000261405|VWF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2930908203125	2	530.818076	1059.6216	1.2432	0.00065993	3.8489	0.002043	5.0921	0.002703	531.3213619343134	91.298	0.3327	91.344	91.261	91.594	0.045448					12	7	2	0	0	0	0.20789	1	9498	9498		12.207	0	1	90636			29721	2543	19893	19903	33792	33792					0.09417254939717168
LLDPKLCYL	9	Unmodified	_LLDPKLCYL_					0	0	0		ENST00000479979.1_1_1:167409855-167487702:-|nuORF;nc|ENSG00000198821|P20963-3|CD247;ENSG00000198821|ENST00000362089|CD247;ENST00000483825.5_1_1:167404074-167487702:-|nuORF	ENST00000479979.1_1_1:167409855-167487702:-|nuORF	ENST00000479979.1_1_1:167409855-167487702:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.1992797851562	2	539.304278	1076.594	0.56323	0.00030375	3.2419	0.0017484	3.8051	0.0020521	539.3059395676685	33.333	0.54999	33.545	33.228	33.778	0.21168					17	12	2	0	0	0	0.20789	1	2444	2444		37.159	3.6435	1	250020			29722	8342	19894	19904	33793	33793					0.05877028407803664
LLDQGQLNKY	10	Unmodified	_LLDQGQLNKY_					0	0	0		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3214111328125	2	596.322045	1190.62954	-0.46996	-0.00028024	0.94773	0.00056515	0.47777	0.00028491	596.3224739994458	50.68	0.62265	50.678	50.392	51.014	-0.0020447					48	20	3	0	0	0	0.099622	3	4297	4297;4305;4312		101.25	32.768	1	176940			29723	14964	19895	19905	33794;33795;33796	33794					0.04184782189190628
LLDQGQLNKY	10	Unmodified	_LLDQGQLNKY_					0	0	0		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.32373046875	2	596.322045	1190.62954	-0.17294	-0.00010313	0.66571	0.00039698	0.49277	0.00029385	596.3222417745327	50.656	0.68645	50.632	50.384	51.07	-0.02343					43	22	3	0	0	0	7.4855E-07	3	4393	4393;4406;4412		150.36	78.726	1	211330			29724	14964	19895	19905	33797;33798;33799	33797					0.04184782189190628
LLDQGQLNKY	10	Unmodified	_LLDQGQLNKY_					0	0	0		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3229370117188	2	596.322045	1190.62954	-1.4247	-0.0008496	2.0984	0.0012513	0.6737	0.00040174	596.3232679312307	50.712	0.56657	50.719	50.476	51.043	0.0077477					35	20	2	0	0	0	0.014926	2	4341	4333;4341		127.46	63.928	1	147770			29725	14964	19895	19905	33800;33801	33801					0.04184782189190628
LLDQGQLNKY	10	Unmodified	_LLDQGQLNKY_					0	0	0		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	596.322045	1190.62954	0.5193	0.00030967	-0.719	-0.00042876	-0.1997	-0.00011909	596.3219309214549	50.296	0.82328	50.744	50.184	51.007	0.44761	0.050622	-0.0024761	NaN	150.36	24	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	542710			29726	14964	19895	19905							0.04184782189190628
LLDRIENRFKS	11	Unmodified	_LLDRIENRFKS_					0	0	0			REV__nc|ENSG00000144935|P48995-2|TRPC1	REV__nc|ENSG00000144935|P48995-2|TRPC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7356872558594	3	464.264892	1389.77285	-1.9375	-0.00089951	-1.0067	-0.0004674	-2.9442	-0.0013669	464.2645687680355	43.405	0.43824	44.179	43.945	44.384	0.77379					19	10	2	0	0	0	0.17586	1	3968	3968		27.644	0	1	585240	+		29727	19919	19896	19906	33802	33802					0.09355209300224487
LLDRQQLPA	9	Unmodified	_LLDRQQLPA_					0	0	0		ENSG00000105523|ENST00000263266|FAM83E	ENSG00000105523|ENST00000263266|FAM83E	ENSG00000105523|ENST00000263266|FAM83E	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.7886352539062	2	527.306198	1052.59784	0.22557	0.00011895	-1.2439	-0.00065592	-1.0183	-0.00053697	527.3056758217631	65.842	1.4123	66.394	65.981	67.393	0.5526					56	41	2	0	0	0	0.20789	1	7321	7321		30.504	2.6214	1	933280			29728	2224	19897	19907	33803	33803					0.07364834225904815
LLDRRLHLQ	9	Unmodified	_LLDRRLHLQ_					0	0	0		ENST00000514992.2_1_17:28928777-28942977:+|nuORF	ENST00000514992.2_1_17:28928777-28942977:+|nuORF	ENST00000514992.2_1_17:28928777-28942977:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.853759765625	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.7932	1	12939	12939		20.947	2.6848	1	3937500			29729	13072	19898	19908	33804	33804					0.11863607136797327
LLDRRLHLQ	9	Unmodified	_LLDRRLHLQ_					0	0	0		ENST00000514992.2_1_17:28928777-28942977:+|nuORF	ENST00000514992.2_1_17:28928777-28942977:+|nuORF	ENST00000514992.2_1_17:28928777-28942977:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3516845703125	2	582.354014	1162.69348	2.7406	0.001596	-3.1524	-0.0018358	-0.4118	-0.00023981	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.78983	1	12788	12788		27.882	1.0861	1	7862700			29730	13072	19898	19908	33805	33805					0.11863607136797327
LLDSVLVTLVQ	11	Unmodified	_LLDSVLVTLVQ_					0	0	0		ENSG00000185504|ENST00000327787|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.58154296875	3	400.579706	1198.71729	2.7176	0.0010886	-0.65151	-0.00026098	2.0661	0.00082764	400.57928348734663	112.87	0.76526	112.84	112.7	113.46	-0.024811					36	18	3	0	0	0	0.74405	1	12545	12545		23.378	0	1	3158500			29731	7718	19899	19909	33806	33806					0.1258798305993878
LLDTLLVLG	9	Unmodified	_LLDTLLVLG_					0	0	0			REV__ENSG00000180900|ENST00000356994|SCRIB	REV__ENSG00000180900|ENST00000356994|SCRIB	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8058166503906	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.266	1	42.266	41.766	42.766	0								0	0	0	0.30053	1	2917	2917		30.504	1.3541	1		+		29732	22423	19900	19910	33807	33807					0.11580985768227947
LLDVALPN	8	Unmodified	_LLDVALPN_					0	0	0			REV__nc|ENSG00000112062|Q16539-2|MAPK14	REV__nc|ENSG00000112062|Q16539-2|MAPK14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2613220214844	2	427.752736	853.490919	2.6659	0.0011403	-4.4672	-0.0019109	-1.8013	-0.00077052	427.75079020247216	90.171	0.89903	90.217	89.656	90.555	0.04644					28	20	2	0	0	0	0.4196	1	9356	9356		16.473	0	1	120670	+		29733	17912	19901	19911	33808	33808					0.05831284011514981
LLDVDVLSP	9	Unmodified	_LLDVDVLSP_					0	0	0		nc|ENSG00000110274|Q9UPV0-2|CEP164;ENSG00000110274|ENST00000278935|CEP164	nc|ENSG00000110274|Q9UPV0-2|CEP164	nc|ENSG00000110274|Q9UPV0-2|CEP164	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.7762145996094	2	485.776408	969.538263	-0.51276	-0.00024909	0.65756	0.00031943	0.1448	7.034E-05	485.7765697674691	71.092	1.4164	71.476	70.999	72.416	0.38449					65	33	3	0	0	0	0.58151	1	7935	7935		47.916	1.9636	1	1666300			29734	2518	19902	19912	33809	33809					0.05227518491858518
LLDVLLQI	8	Unmodified	_LLDVLLQI_					0	0	0			REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.799560546875	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.83646	1	3122	3122		12.207	0	1	890090	+		29735	21608	19903	19913	33810	33810					0.11905003113804469
LLDVLLQI	8	Unmodified	_LLDVLLQI_					0	0	0			REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8000793457031	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.82419	1	3454	3454		13.775	0	1	1294000	+		29736	21608	19903	19913	33811	33811					0.11905003113804469
LLDVLLQI	8	Unmodified	_LLDVLLQI_					0	0	0			REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.3013000488281	2	463.799686	925.584819	-1.1343	-0.00052608	3.785	0.0017555	2.6507	0.0012294	463.8012667988253	46.183	0.63174	46.199	45.791	46.422	0.015514					31	18	2	0	0	0	0.81548	1	3368	3368		20.482	0	1	155340	+		29737	21608	19903	19913	33812	33812					0.11905003113804469
LLDVVKEM	8	Unmodified	_LLDVVKEM_					0	0	0		nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79553706-79569486:-|nuORF;nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5	nc|ENSG00000151208|Q8TDM6-4|DLG5	nc|ENSG00000151208|Q8TDM6-4|DLG5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.76910400390625	2	473.767529	945.520504	0.37537	0.00017784	3.6578	0.001733	4.0332	0.0019108	473.76915790053243	28.466	0.54151	28.502	28.223	28.764	0.03607					29	16	3	0	0	0	0.87922	1	1358	1358		31.955	0.37597	1	57511			29738	5101	19904	19914	33813	33813					0.04556479965356175
LLDYLSAGKST	11	Unmodified	_LLDYLSAGKST_					0	0	0			REV__ENSG00000103351|ENST00000576634|CLUAP1	REV__ENSG00000103351|ENST00000576634|CLUAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.3162231445312	2	584.316428	1166.6183	-1.3681	-0.00079938	1.5538	0.00090792	0.18577	0.00010855	584.3174338604485	68.742	0.43665	68.775	68.537	68.974	0.033005					27	15	2	0	0	0	0.70737	1	6569	6569		30.318	3.2704	1	94400	+		29739	17408	19905	19915	33814	33814					0.04165960095042465
LLDYRFAPS	9	Unmodified	_LLDYRFAPS_					0	0	0			REV__ENSG00000108784|ENST00000225927|NAGLU	REV__ENSG00000108784|ENST00000225927|NAGLU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.2885131835938	2	541.287474	1080.5604	0.52598	0.00028471	-4.3883	-0.0023754	-3.8624	-0.0020907	541.2849430955068	20.499	0.76031	20.43	20.175	20.935	-0.069733					65	32	4	0	0	0	0.77696	1	555	555		31.53	1.2121	1	220230	+		29740	17730	19906	19916	33815	33815					0.023337429602634074
LLEALFLTVD	10	Unmodified	_LLEALFLTVD_					0	0	0		nc|ENSG00000106853|Q14914-2|PTGR1;ENSG00000106853|ENST00000407693|PTGR1;ENST00000374308.1_1_9:114355204-114361641:-|nuORF;ENST00000374313.5_1_9:114355204-114361983:-|nuORF	nc|ENSG00000106853|Q14914-2|PTGR1	nc|ENSG00000106853|Q14914-2|PTGR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3310546875	2	567.326265	1132.63798	2.2465	0.0012745	4.3744	0.0024817	6.6209	0.0037562	567.3287050731724	113.77	1.2385	113.79	113.12	114.36	0.020027					89	56	2	0	0	0	0.86718	1	13759	13759		27.882	4.8398	1	84963			29741	2321	19907	19917	33816	33816					0.07696336105800583
LLEANIRPI	9	Unmodified	_LLEANIRPI_					0	0	0			REV__ENSG00000159256|ENST00000400485|MORC3	REV__ENSG00000159256|ENST00000400485|MORC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8021240234375	2	519.818941	1037.62333	-0.75422	-0.00039206	-2.6152	-0.0013594	-3.3694	-0.0017515	519.8177487131737	86.845	0.70032	87.299	87.144	87.844	0.45429					25	16	2	0	0	0	0.20789	1	10211	10211		38.806	12.01	1	127100	+		29742	20648	19908	19918	33817	33817					0.10602308748298128
LLEAPKKCV	9	Unmodified	_LLEAPKKCV_					0	0	0			REV__ENST00000260323.15_1_15:54919407-54919524:+|nuORF	REV__ENST00000260323.15_1_15:54919407-54919524:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.7971496582031	2	500.79662	999.578688	-1.6124	-0.00080748	3.7604	0.0018832	2.148	0.0010757	500.79842715504543	94.334	1.559	94.532	94.244	95.803	0.19827					54	37	2	0	0	0	0.72402	1	9576	9576		38.806	8.4884	1	438210	+		29743	24366	19909	19919	33818	33818					0.07888161610628686
LLEARKGRG	9	Unmodified	_LLEARKGRG_					0	0	0		L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|58|3|sense	L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|58|3|sense	L1MA2_dup1070|chr3:40761862-40763663:+|3.2984100099557576|0.2553115629358683|3.69|63.0|58|3|sense	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.3057556152344	2	500.306532	998.598512	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.197	1	95.197	94.697	95.697	0								0	0	0	0.28386	1	9461	9461		37.159	6.6555	1				29744	14537	19910	19920	33819	33819					0.09915673665614122
LLEATIAIL	9	Unmodified	_LLEATIAIL_					0	0	0		ENST00000494815.1_1_11:864058-865677:+|nuORF;ENSG00000214063|ENST00000397397|TSPAN4;ENST00000468468.5_1_11:864058-866627:+|nuORF;ENST00000464987.5_1_11:850289-864703:+|nuORF	ENST00000494815.1_1_11:864058-865677:+|nuORF	ENST00000494815.1_1_11:864058-865677:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.80450439453125	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.787	1	41.749	41.249	42.249	-0.038223								0	0	0	0.2969	1	3167	3167		31.955	0	1				29745	8615	19911	19921	33820	33820					0.11580985768216578
LLEDVTWKYT	10	Unmodified	_LLEDVTWKYT_					0	0	0		ENST00000566802.5_1_16:74366359-74378726:-|nuORF;ENSG00000090857|ENST00000288050|PDPR	ENST00000566802.5_1_16:74366359-74378726:-|nuORF	ENST00000566802.5_1_16:74366359-74378726:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.8589477539062	2	634.332079	1266.6496	-0.035391	-2.245E-05	-2.2613	-0.0014344	-2.2967	-0.0014569	634.3305570983373	70.044	0.47867	70.428	70.189	70.668	0.38416					14	11	2	0	0	0	0.37624	1	7729	7729		24.519	11.707	1	208300			29746	13941	19912	19922	33821	33821					0.026945331291244656
LLEEALLRLLP	11	Unmodified	_LLEEALLRLLP_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.2713623046875	3	427.270984	1278.79112	0.59953	0.00025616	0.62387	0.00026656	1.2234	0.00052272	427.2712325235539	37.091	1.1654	37.404	36.962	38.127	0.31312					94	28	5	0	0	0	0.67041	1	2978	2978		36.318	9.5679	1	3902400			29747	8866	19913	19923	33822	33822					0.16287951222261654
LLEELLKV	8	Unmodified	_LLEELLKV_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8057861328125	2	478.804968	955.595384	0.30032	0.0001438	1.2686	0.0006074	1.5689	0.0007512	478.8054155827557	41.804	1.1764	41.773	41.067	42.244	-0.030991					72	29	3	0	0	0	0.91005	1	3064	3064		42.474	1.9018	1	345190	+		29748	19832	19914	19924	33823	33823					0.11580985768239316
LLEENMFWAG	10	Unmodified	_LLEENMFWAG_					0	0	0		ENSG00000198691|ENST00000370225|ABCA4	ENSG00000198691|ENST00000370225|ABCA4	ENSG00000198691|ENST00000370225|ABCA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.2855834960938	2	605.284074	1208.5536	0.52217	0.00031606	2.8738	0.0017395	3.396	0.0020555	605.2854781639707	58.165	1.929	58.276	57.865	59.794	0.11027					166	76	4	0	0	0	0.71918	1	4937	4937		39.253	10.083	1	1588900			29749	8308	19915	19925	33824	33824					-0.042339379825989454
LLEEPFFE	8	Unmodified	_LLEEPFFE_					0	0	0			REV__ENSG00000172465|ENST00000372625|TCEAL1	REV__ENSG00000172465|ENST00000372625|TCEAL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2532958984375	2	512.255308	1022.49606	-0.40094	-0.00020538	-2.5333	-0.0012977	-2.9343	-0.0015031	512.253883322564	54.419	1.295	54.474	54.011	55.305	0.055614					87	42	3	0	0	0	0.88915	1	4473	4473		35.201	0	1	718970	+		29750	21834	19916	19926	33825	33825					-0.014284569165170069
LLEEQRRVQ	9	Unmodified	_LLEEQRRVQ_					0	0	0		ENSG00000055130|ENST00000325222|CUL1	ENSG00000055130|ENST00000325222|CUL1	ENSG00000055130|ENST00000325222|CUL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	585.8300170898438	2	585.833111	1169.65167	-0.75038	-0.0004396	-4.205	-0.0024634	-4.9553	-0.002903	585.8305676475687	57.715	1.3345	57.701	57.24	58.574	-0.013641					81	46	2	0	0	0	0.58668	2	5227	5227;5282		47.657	6.8792	1	146910			29751	1024	19917	19927	33826;33827	33826					0.07363006657601545
LLEEVAIL	8	Unmodified	_LLEEVAIL_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.274169921875	2	450.276044	898.537535	-1.2506	-0.00056311	-2.4536	-0.0011048	-3.7041	-0.0016679	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.89457	1	9594	9594		37.028	0	1	44812000	+		29752	23025	19918	19928	33828	33828					0.08420723842812095
LLEEVLAL	8	Unmodified	_LLEEVLAL_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2;ENSG00000136444|ENST00000258955|RSAD1	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2747497558594	2	450.276044	898.537535	-1.7763	-0.00079984	-1.8855	-0.00084901	-3.6619	-0.0016489	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.86791	1	9525	9525		28.254	1.4582	1	35178000			29753	7954	19919	19929	33829	33829					0.08420723842789357
LLEEVLLA	8	Unmodified	_LLEEVLLA_					0	0	0			REV__nc|ENSG00000187045|Q8IU80-2|TMPRSS6	REV__nc|ENSG00000187045|Q8IU80-2|TMPRSS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2745056152344	2	450.276044	898.537535	-0.14122	-6.3587E-05	-3.5809	-0.0016124	-3.7221	-0.001676	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.9159	1	9797	9797		44.531	7.5026	1	47650000	+		29754	22898	19920	19930	33830	33830					0.08420723842800726
LLEEVVVK	8	Unmodified	_LLEEVVVK_					0	0	0			REV__nc|ENSG00000065413|Q8N8A2-2|ANKRD44	REV__nc|ENSG00000065413|Q8N8A2-2|ANKRD44	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.79083251953125	2	464.789318	927.564084	-0.072724	-3.3801E-05	3.0915	0.0014369	3.0188	0.0014031	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.84341	1	2185	2185		24.203	3.7209	1	297050	+		29755	16499	19921	19931	33831	33831					0.09740412734140591
LLEFGAKAQL	10	Unmodified	_LLEFGAKAQL_					0	0	0		nc|ENSG00000165192|Q8WXH4-3|ASB11;nc|ENSG00000165192|Q8WXH4-2|ASB11;ENSG00000165192|ENST00000480796|ASB11	nc|ENSG00000165192|Q8WXH4-3|ASB11	nc|ENSG00000165192|Q8WXH4-3|ASB11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167114257812	2	545.318774	1088.623	0.15103	8.2357E-05	-4.1145	-0.0022437	-3.9634	-0.0021613	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.82886	1	8843	8843		37.812	2.6595	1	5755000			29756	6059	19922	19932	33832	33832					0.08222889028479585
LLEFVEEL	8	Unmodified	_LLEFVEEL_					0	0	0		ENSG00000165716|ENST00000371692|DIPK1B;nc|ENSG00000165716|Q5VUD6-2|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.8094177246094	2	496.270958	990.527364	-0.74502	-0.00036973	-2.9664	-0.0014721	-3.7114	-0.0018419	496.26945846614535	64.531	0.46819	64.917	64.607	65.075	0.3863					13	10	2	0	0	0	0.4196	1	6970	6970		50.025	2.1089	1	70160			29757	6117	19923	19933	33833	33833					0.03172116117571022
LLEGDEKEYN	10	Unmodified	_LLEGDEKEYN_					0	0	0		nc|ENSG00000178568|Q15303-4|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-2|ERBB4;ENSG00000178568|ENST00000342788|ERBB4	nc|ENSG00000178568|Q15303-4|ERBB4	nc|ENSG00000178568|Q15303-4|ERBB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.2846069335938	2	605.285325	1208.5561	0.98247	0.00059468	0.45991	0.00027838	1.4424	0.00087305	605.2852052046003	58.208	1.6782	58.295	57.834	59.512	0.087002					167	73	3	0	0	0	0.83456	1	4990	4990		32.812	13.709	1	1590000			29758	7212	19924	19934	33834	33834					-0.03983811043940477
LLEGLGLVV	9	Unmodified	_LLEGLGLVV_					0	0	0			REV__ENSG00000181045|ENST00000361193|SLC26A11	REV__ENSG00000181045|ENST00000361193|SLC26A11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.792724609375	2	456.791861	911.569169	0.90302	0.00041249	1.9801	0.00090447	2.8831	0.001317	456.792654311578	37.107	0.83018	37.593	36.916	37.747	0.48581					79	19	5	0	0	0	0.7932	1	2926	2926		12.959	0	1	4180400	+		29759	22438	19925	19935	33835	33835					0.10984716596760791
LLEGLKLMA	9	Unmodified	_LLEGLKLMA_					0	0	0		ENSG00000124177|ENST00000373233|CHD6	ENSG00000124177|ENST00000373233|CHD6	ENSG00000124177|ENST00000373233|CHD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3007507324219	2	494.298996	986.583439	-0.67103	-0.00033169	4.147	0.0020499	3.476	0.0017182	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.77546	1	10637	10637		31.955	2.8053	1	54981000			29760	3311	19926	19936	33836	33836					0.08961045753392227
LLEHLGTSF	9	Unmodified	_LLEHLGTSF_					0	0	0			REV__ENST00000046640.7_1_17:3561399-3563180:+|nuORF	REV__ENST00000046640.7_1_17:3561399-3563180:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7727966308594	2	508.7742	1015.53385	-0.20853	-0.0001061	0.18012	9.1641E-05	-0.028414	-1.4456E-05	508.7741429631401	74.801	1.2844	75.192	74.747	76.031	0.3911					75	30	4	0	0	0	0.15928	1	8491	8491		82.305	4.9875	1	2669700	+		29761	24065	19927	19937	33837	33837					0.026700540689603258
LLEILKQGF	9	Unmodified	_LLEILKQGF_					0	0	0		ENST00000552545.1_1_12:53126121-53126646:+|nuORF	ENST00000552545.1_1_12:53126121-53126646:+|nuORF	ENST00000552545.1_1_12:53126121-53126646:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8169555664062	2	530.823692	1059.63283	-1.1514	-0.00061118	-3.9623	-0.0021033	-5.1137	-0.0027145	530.8215260321958	88.465	0.83104	88.936	88.563	89.394	0.47068					36	20	2	0	0	0	0.20789	1	10416	10416		16.473	4.9621	1	1232600			29762	13682	19928	19938	33838	33838					0.10540077033851958
LLEILSQTK	9	Unmodified	_LLEILSQTK_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;nc|ENSG00000114841|Q9P2D7-6|DNAH1;ENST00000486752.5_1_3:52350520-52422757:+|nuORF	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2940673828125	2	522.818607	1043.62266	0.36701	0.00019188	-3.6443	-0.0019053	-3.2773	-0.0017134	522.8168388258111	17.446	0.27023	16.836	16.659	16.929	-0.6107					7	5	2	0	0	0	0.20789	1	248	248		42.864	0	1	16166			29763	2792	19929	19939	33839	33839					0.1025946930860755
LLEKILDWK	9	Unmodified	_LLEKILDWK_					0	0	0			REV__L1PA7_dup282|chr1:88818677-88820142:+|1.0137488875332268|0.4624574098713206|1.13|63.0|25|2|sense	REV__L1PA7_dup282|chr1:88818677-88820142:+|1.0137488875332268|0.4624574098713206|1.13|63.0|25|2|sense	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	579.346435546875	2	579.350074	1156.6856	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.86	1	108.88	108.38	109.38	0.020561								0	0	0	0.29134	1	11625	11625		34.173	2.6427	1		+		29764	29592	19930	19940	33840	33840					0.11352035096660984
LLEKKGDIH	9	Unmodified	_LLEKKGDIH_					0	0	0		nc|ENSG00000156931|Q8N3P4-2|VPS8;nc|ENSG00000156931|Q8N3P4-3|VPS8;ENSG00000156931|ENST00000625842|VPS8;ENST00000492449.5_1_3:184603882-184769810:+|nuORF	nc|ENSG00000156931|Q8N3P4-2|VPS8	nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.8081665039062	2	526.808574	1051.60259	3.1222	0.0016448	-4.1767	-0.0022003	-1.0545	-0.00055554	526.8062549875466	101.13	2.204	101.08	100.09	102.29	-0.052116					131	51	4	0	0	0	0.25483	1	11004	11004		68.787	2.3575	1	2494300			29765	5402	19931	19941	33841	33841					0.07885718368675043
LLEKKGDIH	9	Unmodified	_LLEKKGDIH_					0	0	0		nc|ENSG00000156931|Q8N3P4-2|VPS8;nc|ENSG00000156931|Q8N3P4-3|VPS8;ENSG00000156931|ENST00000625842|VPS8;ENST00000492449.5_1_3:184603882-184769810:+|nuORF	nc|ENSG00000156931|Q8N3P4-2|VPS8	nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.8070068359375	2	526.808574	1051.60259	1.2418	0.00065418	-2.4353	-0.0012829	-1.1935	-0.00062874	526.8072201508533	100.99	2.1143	101.03	100.03	102.14	0.046349					121	49	4	0	0	0	0.31972	1	10909	10909		63.306	0	1	2474600			29766	5402	19931	19941	33842	33842					0.07885718368675043
LLEKKGDIH	9	Unmodified	_LLEKKGDIH_					0	0	0		nc|ENSG00000156931|Q8N3P4-2|VPS8;nc|ENSG00000156931|Q8N3P4-3|VPS8;ENSG00000156931|ENST00000625842|VPS8;ENST00000492449.5_1_3:184603882-184769810:+|nuORF	nc|ENSG00000156931|Q8N3P4-2|VPS8	nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.8082275390625	2	526.808574	1051.60259	-1.5277	-0.0008048	0.53058	0.00027951	-0.9971	-0.00052528	526.8087430402255	100.83	1.7886	101	100.55	102.33	0.17199					107	43	4	0	0	0	0.18601	1	10458	10458		76.774	5.3962	1	3074100			29767	5402	19931	19941	33843	33843					0.07885718368675043
LLEKKGDIH	9	Unmodified	_LLEKKGDIH_					0	0	0		nc|ENSG00000156931|Q8N3P4-2|VPS8;nc|ENSG00000156931|Q8N3P4-3|VPS8;ENSG00000156931|ENST00000625842|VPS8;ENST00000492449.5_1_3:184603882-184769810:+|nuORF	nc|ENSG00000156931|Q8N3P4-2|VPS8	nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8085327148438	2	526.808574	1051.60259	2.118	0.0011158	-3.9797	-0.0020965	-1.8617	-0.00098074	526.8064931441075	99.786	1.2202	100.12	99.379	100.6	0.33295					60	16	4	0	0	0	0.14386	1	12076	12076		84.916	10.941	1	16521000			29768	5402	19931	19941	33844	33844					0.07885718368675043
LLEKKGDIH	9	Unmodified	_LLEKKGDIH_					0	0	0		nc|ENSG00000156931|Q8N3P4-2|VPS8;nc|ENSG00000156931|Q8N3P4-3|VPS8;ENSG00000156931|ENST00000625842|VPS8;ENST00000492449.5_1_3:184603882-184769810:+|nuORF	nc|ENSG00000156931|Q8N3P4-2|VPS8	nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8085327148438	2	526.808574	1051.60259	2.1591	0.0011374	-4.2531	-0.0022406	-2.0941	-0.0011032	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.17307	1	12136	12136		79.451	10.966	1	36320000			29769	5402	19931	19941	33845	33845					0.07885718368675043
LLEKKGDIH	9	Unmodified	_LLEKKGDIH_					0	0	0		nc|ENSG00000156931|Q8N3P4-2|VPS8;nc|ENSG00000156931|Q8N3P4-3|VPS8;ENSG00000156931|ENST00000625842|VPS8;ENST00000492449.5_1_3:184603882-184769810:+|nuORF	nc|ENSG00000156931|Q8N3P4-2|VPS8	nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8086547851562	2	526.808574	1051.60259	2.1723	0.0011444	-3.985	-0.0020993	-1.8127	-0.00095493	526.806498827833	99.792	0.95116	100.16	99.637	100.59	0.36292					61	16	4	0	0	0	0.17307	1	12152	12152		79.451	13.648	1	16717000			29770	5402	19931	19941	33846	33846					0.07885718368675043
LLEKKQALPP	10	Unmodified	_LLEKKQALPP_					0	0	0		nc|ENSG00000067606|Q05513-3|PRKCZ;ENSG00000067606|ENST00000378567|PRKCZ;nc|ENSG00000067606|Q05513-2|PRKCZ;ENST00000479263.5_1_1:2075906-2116445:+|nuORF;ENST00000505322.5_1_1:2100378-2116445:+|nuORF	nc|ENSG00000067606|Q05513-3|PRKCZ	nc|ENSG00000067606|Q05513-3|PRKCZ	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.853515625	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.77314	3	10520	10461;10520;10558		40.778	6.6056	1	34546000			29771	1185	19932	19942	33847;33848;33849	33848					0.1340743747093711
LLEKKQALPP	10	Unmodified	_LLEKKQALPP_					0	0	0		nc|ENSG00000067606|Q05513-3|PRKCZ;ENSG00000067606|ENST00000378567|PRKCZ;nc|ENSG00000067606|Q05513-2|PRKCZ;ENST00000479263.5_1_1:2075906-2116445:+|nuORF;ENST00000505322.5_1_1:2100378-2116445:+|nuORF	nc|ENSG00000067606|Q05513-3|PRKCZ	nc|ENSG00000067606|Q05513-3|PRKCZ	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8530883789062	2	568.855524	1135.69649	-0.35573	-0.00020236	-3.0084	-0.0017113	-3.3641	-0.0019137	568.8537210066357	105.99	1.5144	105.99	105.37	106.89	0					65	34	2	0	0	0	0.37624	1	10883	10883		19.997	4.355	1	402380			29772	1185	19932	19942	33850	33850					0.1340743747093711
LLEKKQALPP	10	Unmodified	_LLEKKQALPP_					0	0	0		nc|ENSG00000067606|Q05513-3|PRKCZ;ENSG00000067606|ENST00000378567|PRKCZ;nc|ENSG00000067606|Q05513-2|PRKCZ;ENST00000479263.5_1_1:2075906-2116445:+|nuORF;ENST00000505322.5_1_1:2100378-2116445:+|nuORF	nc|ENSG00000067606|Q05513-3|PRKCZ	nc|ENSG00000067606|Q05513-3|PRKCZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8529663085938	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.71042	2	10963	10963;11081		44.117	8.4985	1	50786000			29773	1185	19932	19942	33851;33852	33851					0.1340743747093711
LLEKKQALPP	10	Unmodified	_LLEKKQALPP_					0	0	0		nc|ENSG00000067606|Q05513-3|PRKCZ;ENSG00000067606|ENST00000378567|PRKCZ;nc|ENSG00000067606|Q05513-2|PRKCZ;ENST00000479263.5_1_1:2075906-2116445:+|nuORF;ENST00000505322.5_1_1:2100378-2116445:+|nuORF	nc|ENSG00000067606|Q05513-3|PRKCZ	nc|ENSG00000067606|Q05513-3|PRKCZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.85400390625	2	568.855524	1135.69649	-1.3907	-0.00079112	-2.9165	-0.001659	-4.3072	-0.0024502	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.74274	6	10933	10676;10724;10837;10933;10998;11082		42.396	8.2236	1	72465000			29774	1185	19932	19942	33853;33854;33855;33856;33857;33858	33856					0.1340743747093711
LLEKLYKVN	9	Unmodified	_LLEKLYKVN_					0	0	0		ENSG00000138641|ENST00000402738|HERC3	ENSG00000138641|ENST00000402738|HERC3	ENSG00000138641|ENST00000402738|HERC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3406372070312	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.78983	2	12188	12188;12636		27.882	3.0457	1	4071000			29775	4310	19933	19943	33859;33860	33859					0.11535748579603933
LLEKTIKSM	9	Unmodified	_LLEKTIKSM_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8178100585938	2	531.81501	1061.61547	0.70533	0.00037511	2.7047	0.0014384	3.41	0.0018135	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.7932	1	8358	8358		21.96	1.4781	1	1163300	+		29776	23043	19934	19944	33861	33861					0.0871241343654674
LLELAERPPL	10	Unmodified	_LLELAERPPL_					0	0	0			REV__ENST00000481749.5_1_3:138374233-138426144:-|nuORF	REV__ENST00000481749.5_1_3:138374233-138426144:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8428344726562	2	575.845156	1149.67576	-1.368	-0.00078774	-2.3653	-0.001362	-3.7333	-0.0021498	575.8436459594299	90.372	2.9394	90.548	88.581	91.52	0.1758					221	69	4	0	0	0	0.8608	1	8910	8910		34.173	1.3601	1	2135900	+		29777	16383	19935	19945	33862	33862					0.10690847091291289
LLELAPEV	8	Unmodified	_LLELAPEV_					0	0	0			REV__ENST00000460984.1_1_X:153670432-153670829:+|nuORF	REV__ENST00000460984.1_1_X:153670432-153670829:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2408447265625	2	442.260394	882.506234	0.58565	0.00025901	-3.6557	-0.0016168	-3.0701	-0.0013578	442.25854056599167	83.291	1.4567	83.438	82.715	84.171	0.14695					54	33	2	0	0	0	0.4196	1	8089	8089		35.201	15.841	1	56482	+		29778	23444	19936	19946	33863	33863					0.06028150808708688
LLELGGNN	8	Unmodified	_LLELGGNN_					0	0	0		nc|ENSG00000164904|P49419-4|ALDH7A1;nc|ENSG00000164904|P49419-2|ALDH7A1;ENSG00000164904|ENST00000409134|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	415.2530212402344	2	415.224342	828.434132	0.59148	0.0002456	-1.3149	-0.00054598	-0.72341	-0.00030038	415.22387690269017	84.964	1.4263	85.112	84.345	85.771	0.14857					49	32	2	0	0	0	0.4196	1	8309	8309		21.96	0	1	196660			29779	6022	19937	19947	33864	33864					0.013052364549935191
LLELGGNN	8	Unmodified	_LLELGGNN_					0	0	0		nc|ENSG00000164904|P49419-4|ALDH7A1;nc|ENSG00000164904|P49419-2|ALDH7A1;ENSG00000164904|ENST00000409134|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	415.224342	828.434132	-1.2213	-0.00050713	-0.13705	-5.6908E-05	-1.3584	-0.00056404	415.2242823268252	85.261	1.0386	85.261	84.788	85.826	0	0.15394	0.00069254	NaN	21.96	32	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116010			29780	6022	19937	19947							0.013052364549935191
LLELGGNN	8	Unmodified	_LLELGGNN_					0	0	0		nc|ENSG00000164904|P49419-4|ALDH7A1;nc|ENSG00000164904|P49419-2|ALDH7A1;ENSG00000164904|ENST00000409134|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	415.224342	828.434132	-0.18722	-7.7739E-05	-0.57569	-0.00023904	-0.76291	-0.00031678	415.22409060653644	85.092	1.3502	85.16	84.593	85.943	0.067215	0.052969	0.00032828	NaN	21.96	41	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146240			29781	6022	19937	19947							0.013052364549935191
LLELGGNN	8	Unmodified	_LLELGGNN_					0	0	0		nc|ENSG00000164904|P49419-4|ALDH7A1;nc|ENSG00000164904|P49419-2|ALDH7A1;ENSG00000164904|ENST00000409134|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	415.224342	828.434132	0.75908	0.00031519	-1.9205	-0.00079742	-1.1614	-0.00048223	415.22352607832096	85.201	1.2575	85.129	84.585	85.843	-0.07196	0.022529	-0.00078849	NaN	21.96	42	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188650			29782	6022	19937	19947							0.013052364549935191
LLELGGNN	8	Unmodified	_LLELGGNN_					0	0	0		nc|ENSG00000164904|P49419-4|ALDH7A1;nc|ENSG00000164904|P49419-2|ALDH7A1;ENSG00000164904|ENST00000409134|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	415.224342	828.434132	2.8749	0.0011937	-4.0849	-0.0016962	-1.21	-0.00050244	415.2226199301619	84.921	1.1316	84.98	84.632	85.763	0.059258	-0.12628	-0.002586	NaN	21.96	36	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176520			29783	6022	19937	19947							0.013052364549935191
LLELGGNN	8	Unmodified	_LLELGGNN_					0	0	0		nc|ENSG00000164904|P49419-4|ALDH7A1;nc|ENSG00000164904|P49419-2|ALDH7A1;ENSG00000164904|ENST00000409134|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	415.224342	828.434132	-1.8153	-0.00075375	0.59386	0.00024658	-1.2214	-0.00050716	415.2245584243247	84.861	0.90771	85.036	84.531	85.439	0.17561	-0.070182	0.0012995	NaN	21.96	35	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172140			29784	6022	19937	19947							0.013052364549935191
LLELGGNN	8	Unmodified	_LLELGGNN_					0	0	0		nc|ENSG00000164904|P49419-4|ALDH7A1;nc|ENSG00000164904|P49419-2|ALDH7A1;ENSG00000164904|ENST00000409134|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	nc|ENSG00000164904|P49419-4|ALDH7A1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	415.224342	828.434132	-1.8003	-0.00074751	0.43134	0.0001791	-1.3689	-0.00056841	415.22446009746665	84.919	0.82773	85.068	84.753	85.581	0.14952	-0.038507	0.0011646	NaN	21.96	33	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144510			29785	6022	19937	19947							0.013052364549935191
LLELKIPG	8	Unmodified	_LLELKIPG_					0	0	0			REV__ENST00000562258.5_1_15:42452954-42456706:-|nuORF	REV__ENST00000562258.5_1_15:42452954-42456706:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78857421875	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.8347	1	3113	3113		23.042	3.6825	1	403970	+		29786	21334	19938	19948	33865	33865					0.11308733942314575
LLEMKRKNQ	9	Unmodified	_LLEMKRKNQ_					0	0	0		ENST00000547526.1_1_12:57910914-57914246:-|nuORF	ENST00000547526.1_1_12:57910914-57914246:-|nuORF	ENST00000547526.1_1_12:57910914-57914246:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.3360595703125	2	580.334433	1158.65431	0.33138	0.00019231	-3.5373	-0.0020528	-3.2059	-0.0018605	580.3322507801092	39.778	0.78229	39.866	39.53	40.312	0.088375					57	19	4	0	0	0	0.78536	1	2439	2439		29.15	1.2673	1	1035100			29787	13610	19939	19949	33866	33866					0.08133138790913108
LLENALIVF	9	Unmodified	_LLENALIVF_					0	0	0		ENSG00000186440|ENST00000641540|OR6P1	ENSG00000186440|ENST00000641540|OR6P1	ENSG00000186440|ENST00000641540|OR6P1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3141479492188	2	516.310418	1030.60628	3.1012	0.0016012	3.8274	0.0019761	6.9286	0.0035773	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.78058	1	13093	13093		30.504	0.6621	1	1162600			29788	7796	19940	19950	33867	33867					0.09220388142512093
LLEPILHQL	9	Unmodified	_LLEPILHQL_					0	0	0		ENSG00000161896|ENST00000293756|IP6K3	ENSG00000161896|ENST00000293756|IP6K3	ENSG00000161896|ENST00000293756|IP6K3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3279418945312	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.78983	1	12438	12438		27.882	4.3595	1	4041000			29789	5658	19941	19951	33868	33868					0.10939479408125408
LLEPLLKGPSP	11	Unmodified	_LLEPLLKGPSP_					0	0	0			REV__ENST00000591753.1_2_17:40715869-40717983:+|nuORF	REV__ENST00000591753.1_2_17:40715869-40717983:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3540649414062	2	582.355357	1162.69616	0.72244	0.00042072	-3.9804	-0.002318	-3.258	-0.0018973	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.69995	1	11344	11344		31.53	0	1	132960000	+		29790	29201	19942	19952	33869	33869					0.12132017751082458
LLEPLLKS	8	Unmodified	_LLEPLLKS_					0	0	0			REV__ENSG00000068120|ENST00000393818|COASY	REV__ENSG00000068120|ENST00000393818|COASY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.790283203125	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.80706	1	3630	3630		19.36	0	1	662040	+		29791	16554	19943	19953	33870	33870					0.10984716596749422
LLEQLSPLL	9	Unmodified	_LLEQLSPLL_					0	0	0		nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	nc|ENSG00000080345|Q5UIP0-2|RIF1	nc|ENSG00000080345|Q5UIP0-2|RIF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3150024414062	2	513.3157	1024.61685	-0.40055	-0.00020561	2.1862	0.0011222	1.7857	0.00091662	513.3168893835641	46.422	0.89507	46.437	46.084	46.979	0.015514					35	24	2	0	0	0	0.78058	1	3433	3433		30.504	2.6214	1	150790			29792	1439	19944	19954	33871	33871					0.10552370796949617
LLERRISD	8	Unmodified	_LLERRISD_					0	0	0			REV__ENSG00000185085|ENST00000330574|INTS5	REV__ENSG00000185085|ENST00000330574|INTS5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29052734375	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.89962	1	8665	8665		38.806	4.6336	1	9566900	+		29793	22735	19945	19955	33872	33872					0.06628261191792717
LLERSGFRR	9	Unmodified	_LLERSGFRR_					0	0	0			REV__ENSG00000225614|ENST00000565624|ZNF469	REV__ENSG00000225614|ENST00000565624|ZNF469	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3311157226562	2	567.330539	1132.64652	-1.3958	-0.00079187	0.45547	0.0002584	-0.94031	-0.00053347	567.3306768153905	113.32	5.91	113.27	113.24	119.15	-0.044777					245	138	3	0	0	0	0.7932	1	12688	12688		21.96	0	1	1691900	+		29794	23739	19946	19956	33873	33873					0.0855074758567298
LLERTGYTLDV	11	Unmodified	_LLERTGYTLDV_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3467407226562	2	640.34826	1278.68197	0.023116	1.4803E-05	-2.7155	-0.0017389	-2.6924	-0.0017241	640.3466349042857	103.14	0.64318	103.14	102.83	103.47	0					62	15	6	0	0	0	0.45916	2	10571	10571;10593		54.776	7.119	1	12256000			29795	487;3429	19947	19957	33874;33875	33874					0.05377320532124941
LLERTGYTLDV	11	Unmodified	_LLERTGYTLDV_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3466186523438	2	640.34826	1278.68197	-0.067518	-4.3235E-05	-2.5359	-0.0016238	-2.6034	-0.0016671	640.346558921285	103.14	0.5662	103.15	102.88	103.44	0.0082016					46	13	4	0	0	0	0.31387	2	11085	11074;11085		72.879	33.626	1	2899800			29796	487;3429	19947	19957	33876;33877	33877					0.05377320532124941
LLERTGYTLDV	11	Unmodified	_LLERTGYTLDV_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.34765625	2	640.34826	1278.68197	-0.069513	-4.4512E-05	-1.6417	-0.0010512	-1.7112	-0.0010958	640.3470431306699	103.69	0.47507	103.69	103.47	103.95	-0.0035706					20	11	2	0	0	0	0.65746	1	11161	11161		37.812	2.6595	1	376100			29797	487;3429	19947	19957	33878	33878					0.05377320532124941
LLERTGYTLDV	11	Unmodified	_LLERTGYTLDV_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3468017578125	2	640.34826	1278.68197	1.5878	0.0010167	-4.1008	-0.0026259	-2.513	-0.0016092	640.3455184855359	102.86	0.59948	103.05	102.76	103.36	0.18297					44	14	4	0	0	0	0.48529	1	10855	10855		52.937	6.4799	1	4444300			29798	487;3429	19947	19957	33879	33879					0.05377320532124941
LLERTGYTLDV	11	Unmodified	_LLERTGYTLDV_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3460083007812	2	640.34826	1278.68197	1.5863	0.0010158	-3.9311	-0.0025173	-2.3448	-0.0015015	640.3458160090516	103.41	0.46194	103.59	103.36	103.82	0.18298					25	11	3	0	0	0	0.66929	1	10936	10936		36.447	1.2947	1	513960			29799	487;3429	19947	19957	33880	33880					0.05377320532124941
LLERTGYTLDV	11	Unmodified	_LLERTGYTLDV_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3465576171875	2	640.34826	1278.68197	0.93986	0.00060184	-3.8166	-0.002444	-2.8768	-0.0018421	640.3460312358319	102.96	0.59602	103.09	102.81	103.4	0.12622					50	14	5	0	0	0	0.53361	1	10854	10854		49.536	8.1094	1	4886000			29800	487;3429	19947	19957	33881	33881					0.05377320532124941
LLERTGYTLDV	11	Unmodified	_LLERTGYTLDV_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3450927734375	2	640.34826	1278.68197	0.93953	0.00060163	-2.6056	-0.0016685	-1.6661	-0.0010669	640.3463177638232	103.54	0.54715	103.67	103.4	103.95	0.12622					32	13	3	0	0	0	0.66929	1	10964	10964		36.447	6.129	1	562200			29801	487;3429	19947	19957	33882	33882					0.05377320532124941
LLERTGYTLDV	11	Unmodified	_LLERTGYTLDV_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3458251953125	2	640.34826	1278.68197	-1.1585	-0.00074186	-1.3257	-0.00084891	-2.4842	-0.0015908	640.3471961992259	102.97	0.59128	103.08	102.79	103.39	0.11495					48	14	4	0	0	0	0.41466	3	10825	10790;10800;10825		58.23	15.523	1	4755400			29802	487;3429	19947	19957	33883;33884;33885	33885					0.05377320532124941
LLERTGYTLDV	11	Unmodified	_LLERTGYTLDV_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3463134765625	2	640.34826	1278.68197	1.7547	0.0011237	-4.3669	-0.0027964	-2.6122	-0.0016727	640.3452591668301	102.79	0.81303	103.02	102.65	103.47	0.22556					88	25	4	0	0	0	0.36477	3	12526	12475;12510;12526		62.107	10.915	1	14025000			29803	487;3429	19947	19957	33886;33887;33888	33888					0.05377320532124941
LLERVLVKWL	10	Unmodified	_LLERVLVKWL_					0	0	0			REV__ENST00000296412.12_1_4:100003131-100003182:-|nuORF	REV__ENST00000296412.12_1_4:100003131-100003182:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.37646484375	2	634.908091	1267.80163	2.1983	0.0013957	-2.419	-0.0015358	-0.22068	-0.00014011	634.9068175189909	112.2	0.15662	112.23	112.14	112.29	0.030594					7	4	2	0	0	0	0.37624	1	13564	13564		29.17	10.067	1	253710	+		29804	24711	19948	19958	33889	33889					0.17843978667360716
LLERYRRQ	8	Unmodified	_LLERYRRQ_					0	0	0			REV__ENSG00000079313|ENST00000170168|REXO1	REV__ENSG00000079313|ENST00000170168|REXO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.329833984375	2	567.330539	1132.64652	-1.3957	-0.00079181	0.07479	4.2431E-05	-1.3209	-0.00074938	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.87479	1	9744	9744		30.504	0	1	17338000	+		29805	16780	19949	19959	33890	33890					0.08550747585650242
LLESHSLLKRL	11	Unmodified	_LLESHSLLKRL_					0	0	0			REV__ENST00000367545.7_1_6:144783967-144794892:+|nuORF	REV__ENST00000367545.7_1_6:144783967-144794892:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2742919921875	3	436.938117	1307.79252	0.087811	3.8368E-05	3.5222	0.001539	3.61	0.0015773	436.93951486031364	46.748	1.4073	46.734	46.189	47.597	-0.013821					110	37	4	0	0	0	0.74771	1	3826	3826		22.562	1.7244	1	618900	+		29806	25569	19950	19960	33891	33891					0.15093585311024071
LLETFLESAPQ	11	Unmodified	_LLETFLESAPQ_					0	0	0		ENSG00000171044|ENST00000416569|XKR6;nc|ENSG00000171044|Q5GH73-2|XKR6	ENSG00000171044|ENST00000416569|XKR6	ENSG00000171044|ENST00000416569|XKR6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.5903625488281	3	416.555449	1246.64452	1.098	0.00045738	-1.0472	-0.00043623	0.050772	2.1149E-05	416.5548424809657	33.435	0.29565	33.604	33.442	33.737	0.16971					10	6	2	0	0	0	0.17432	1	2411	2411		15.921	0	1	51411			29807	6634	19951	19961	33892	33892					0.031062292665183122
LLETYYTGVS	10	Unmodified	_LLETYYTGVS_					0	0	0		chr11:90038715-90039865|25|40.6|0.03|10.18|+|2|TRIM49C,TRIM49C|1;chr11:89930297-89931171|23|12.96|0.03|8.86|+|2|TRIM49D2,TRIM49D2|1;chr11:89799813-89800966|28|29.61|0.03|9.76|-|2|TRIM49,TRIM49|1;chr11:49035117-49036301|24|20.96|0.01|10.54|+|2|TRIM49B,TRIM49B|1	chr11:90038715-90039865|25|40.6|0.03|10.18|+|2|TRIM49C,TRIM49C|1	chr11:90038715-90039865|25|40.6|0.03|10.18|+|2|TRIM49C,TRIM49C|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	573.7937622070312	2	573.289879	1144.56521	-1.3935	-0.00079889	-4.4849	-0.0025712	-5.8785	-0.0033701	573.2873936717183	30.268	1.1577	30.268	29.824	30.981	0					60	39	2	0	0	0	0.86218	1	1424	1424		32.812	6.0163	1	122110			29808	103	19952	19962	33893	33893					-0.0012941768761720596
LLEVPDPNVVP	11	Unmodified	_LLEVPDPNVVP_					0	0	0		ENSG00000163933|ENST00000296292|RFT1	ENSG00000163933|ENST00000296292|RFT1	ENSG00000163933|ENST00000296292|RFT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3331298828125	2	596.334621	1190.65469	-0.30561	-0.00018224	-2.5745	-0.0015353	-2.8801	-0.0017175	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.69995	1	9603	9603		31.53	2.3598	1	740920			29809	5886	19953	19963	33894	33894					0.06698836991745338
LLEVVKTN	8	Unmodified	_LLEVVKTN_					0	0	0			REV__ENSG00000164494|ENST00000369037|PDSS2	REV__ENSG00000164494|ENST00000369037|PDSS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.2776794433594	2	458.279118	914.543683	-1.8071	-0.00082815	0.41953	0.00019226	-1.3876	-0.00063589	458.27923297817614	42.002	0.67372	42.7	42.418	43.091	0.69754					38	16	3	0	0	0	0.79403	1	3725	3725		63.306	2.3343	1	1196800	+		29810	21087	19954	19964	33895	33895					0.08299242074326685
LLEWSSTSTAD	11	Unmodified	_LLEWSSTSTAD_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.2846069335938	2	605.285325	1208.5561	0.52216	0.00031606	0.80668	0.00048827	1.3288	0.00080433	605.2854781639707	58.165	1.929	58.276	57.865	59.794	0.11027					166	76	4	0	0	0	0.62914	1	4993	4993		39.253	15.05	1	1588900	+		29811	23015	19955	19965	33896	33896					-0.03983811043940477
LLFAEILTR	9	Unmodified	_LLFAEILTR_					0	0	0		ENSG00000167077|ENST00000401548|MEI1;nc|ENSG00000167077|Q5TIA1-6|MEI1;nc|ENSG00000167077|Q5TIA1-4|MEI1	ENSG00000167077|ENST00000401548|MEI1	ENSG00000167077|ENST00000401548|MEI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3270874023438	2	538.329142	1074.64373	-0.51595	-0.00027775	-2.4109	-0.0012978	-2.9268	-0.0015756	538.3278592314944	105.99	1.6493	105.99	105.37	107.02	0					100	37	3	0	0	0	0.76764	1	11050	11050		34.173	1.3601	1	642860			29812	6264	19956	19966	33897	33897					0.1093947940810267
LLFAFRKEAL	10	Unmodified	_LLFAFRKEAL_					0	0	0		ENSG00000085465|ENST00000369732|OVGP1	ENSG00000085465|ENST00000369732|OVGP1	ENSG00000085465|ENST00000369732|OVGP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.2469482421875	3	403.24477	1206.71248	3.1806	0.0012826	2.1516	0.00086761	5.3322	0.0021502	403.2455898338112	104.57	4.2773	104.61	103.55	107.83	0.039864					310	101	5	0	0	0	0.86272	1	11529	11529		24.519	1.9395	1	15278000			29813	1531	19957	19967	33898	33898					0.11739143707859512
LLFAFRKEAL	10	Unmodified	_LLFAFRKEAL_					0	0	0		ENSG00000085465|ENST00000369732|OVGP1	ENSG00000085465|ENST00000369732|OVGP1	ENSG00000085465|ENST00000369732|OVGP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.2467346191406	3	403.24477	1206.71248	3.4575	0.0013942	2.374	0.00095732	5.8315	0.0023515	403.245812263779	104.32	2.7467	104.55	103.67	106.42	0.2268					126	71	3	0	0	0	0.86587	1	12723	12723		29.17	0	1	736130			29814	1531	19957	19967	33899	33899					0.11739143707859512
LLFALLIAFLL	11	Unmodified	_LLFALLIAFLL_					0	0	0			REV__ENSG00000177917|ENST00000326446|ARL6IP6	REV__ENSG00000177917|ENST00000326446|ARL6IP6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	623.9187622070312	2	623.91231	1245.81007	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.78	1	109.84	109.34	110.34	0.068001								0	0	0	0.56276	1	13334	13334		11.511	0	1		+		29815	22237	19958	19968	33900	33900					0.19699532584013468
LLFALLLAM	9	Unmodified	_LLFALLLAM_					0	0	0		ENSG00000104499|ENST00000220940|GML	ENSG00000104499|ENST00000220940|GML	ENSG00000104499|ENST00000220940|GML	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	502.8140563964844	2	502.814282	1003.61401	-0.072215	-3.6311E-05	-1.2091	-0.00060793	-1.2813	-0.00064424	502.8137358537146	97.184	3.7296	97.233	96.655	100.38	0.048157					256	86	5	0	0	0	0.7932	1	10438	10438		21.702	1.7056	1	22931000			29816	2135	19959	19969	33901	33901					0.11234824138443855
LLFALSLARLI	11	Unmodified	_LLFALSLARLI_					0	0	0			REV__ENST00000479107.1_1_6:33037343-33041347:-|nuORF	REV__ENST00000479107.1_1_6:33037343-33041347:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.4032592773438	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.796	1	23.849	23.349	24.349	0.05291								0	0	0	0.56276	1	780	780		24.519	8.046	1		+		29817	23762	19960	19970	33902	33902					0.1854857629309663
LLFCRLFL	8	Unmodified	_LLFCRLFL_					0	0	0		ENST00000531389.2_1_12:122991779-122992905:-|nuORF	ENST00000531389.2_1_12:122991779-122992905:-|nuORF	ENST00000531389.2_1_12:122991779-122992905:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.2691650390625	2	512.804248	1023.59394	0.59157	0.00030336	2.2793	0.0011689	2.8709	0.0014722	512.8052558918077	75.981	0.22863	76.114	76.01	76.239	0.13325					9	6	2	0	0	0	0.4196	1	7105	7105		21.702	0	1	33003			29818	13359	19961	19971	33903	33903					0.08309073198472561
LLFELDKVHLL	11	Unmodified	_LLFELDKVHLL_					0	0	0			REV__nc|ENSG00000178125|Q7Z4L9|PPP1R42	REV__nc|ENSG00000178125|Q7Z4L9|PPP1R42	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	447.27374267578125	3	447.270984	1338.79112	-0.14504	-6.4873E-05	4.0406	0.0018073	3.8956	0.0017424	447.2727193648806	107.88	0.31844	107.84	107.61	107.93	-0.042404					31	7	5	0	0	0	0.74771	1	11735	11735		22.562	0.78116	1	28572000	+		29819	22256	19962	19972	33904	33904					0.13527951222295087
LLFELDKVHLL	11	Unmodified	_LLFELDKVHLL_					0	0	0			REV__nc|ENSG00000178125|Q7Z4L9|PPP1R42	REV__nc|ENSG00000178125|Q7Z4L9|PPP1R42	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.27392578125	3	447.270984	1338.79112	0.74994	0.00033542	3.3821	0.0015127	4.132	0.0018481	447.27239062607987	107.84	0.4288	107.93	107.58	108.01	0.084412					37	10	5	0	0	0	0.75906	1	11557	11557		20.03	1.4994	1	39207000	+		29820	22256	19962	19972	33905	33905					0.13527951222295087
LLFENRESR	9	Unmodified	_LLFENRESR_					0	0	0			REV__ENSG00000101868|ENST00000379068|POLA1	REV__ENSG00000101868|ENST00000379068|POLA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3538818359375	2	582.312012	1162.60947	-1.347	-0.00078435	2.4192	0.0014087	1.0722	0.00062438	582.3128149956419	103.33	1.1094	103.44	103.27	104.38	0.11494					38	27	3	0	0	0	0.20789	1	10907	10907		34.173	5.023	1	661510	+		29821	17307	19963	19973	33906	33906					0.03467031249238062
LLFENTSARL	10	Unmodified	_LLFENTSARL_					0	0	0			REV__ENSG00000131398|ENST00000477616|KCNC3;REV__nc|ENSG00000116396|Q03721|KCNC4	REV__nc|ENSG00000116396|Q03721|KCNC4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3538208007812	2	582.324588	1162.63462	0.88289	0.00051413	1.4373	0.00083695	2.3201	0.0013511	582.3249289231995	103.75	0.24511	103.86	103.74	103.98	0.11684					12	5	3	0	0	0	0.37624	1	10978	10978		40.778	19.092	1	210960	+		29822	18950;29794	19964	19974	33907	33907					0.059810860518155096
LLFEQKPKS	9	Unmodified	_LLFEQKPKS_					0	0	0			REV__ENSG00000024526|ENST00000456315|DEPDC1	REV__ENSG00000024526|ENST00000456315|DEPDC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3168334960938	2	545.318774	1088.623	-0.68757	-0.00037494	-3.0506	-0.0016636	-3.7382	-0.0020385	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.58063	1	8664	8664		47.96	1.9873	1	3608000	+		29823	16255	19965	19975	33908	33908					0.08222889028479585
LLFERQQW	8	Unmodified	_LLFERQQW_					0	0	0		ENSG00000128408|ENST00000614167|RIBC2	ENSG00000128408|ENST00000614167|RIBC2	ENSG00000128408|ENST00000614167|RIBC2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402099609375	2	560.300916	1118.58728	-1.4187	-0.00079487	-3.8837	-0.002176	-5.3024	-0.0029709	560.2992820363511	102.17	0.43886	102.3	101.97	102.41	0.13569					13	10	2	0	0	0	0.4196	1	10675	10675		19.36	0	1	313400			29824	3541	19966	19976	33909	33909					0.03272851571477986
LLFEVPSITT	10	Unmodified	_LLFEVPSITT_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;nc|ENSG00000170921|Q9HCD6|TANC2;nc|ENSG00000170921|Q9HCD6-2|TANC2;ENSG00000170921|ENST00000689528|TANC2;nc|ENSG00000170921|Q9HCD6-3|TANC2;nc|ENSG00000170921|Q9HCD6-4|TANC2	nc|ENSG00000115183|Q9C0D5-2|TANC1;nc|ENSG00000170921|Q9HCD6|TANC2	nc|ENSG00000170921|Q9HCD6|TANC2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.34033203125	2	560.31844	1118.62233	-0.41034	-0.00022992	-2.5542	-0.0014312	-2.9645	-0.0016611	560.3167795452766	102.49	0.2959	102.49	102.21	102.51	0					9	7	2	0	0	0	0.37624	1	10460	10460		29.15	8.2026	1	368440			29825	2816;6624	19967	19977	33910	33910					0.06776049588734168
LLFFFMMAL	9	Unmodified	_LLFFFMMAL_					0	0	0			REV__ENST00000368324.4_1_1:155851301-155851535:+|nuORF	REV__ENST00000368324.4_1_1:155851301-155851535:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.7991333007812	2	566.800317	1131.58608	0.066586	3.7741E-05	-4.3143	-0.0024454	-4.2477	-0.0024076	566.797766000371	79.428	1.3577	79.844	79.274	80.632	0.41621					64	31	4	0	0	0	0.55559	1	9102	9102		49.211	1.2513	1	590540	+		29826	25591	19968	19978	33911	33911					0.025551778867111352
LLFFFMMAL	9	Unmodified	_LLFFFMMAL_					0	0	0			REV__ENST00000368324.4_1_1:155851301-155851535:+|nuORF	REV__ENST00000368324.4_1_1:155851301-155851535:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	566.800317	1131.58608	0.6948	0.00039381	-5.0584	-0.0028671	-4.3636	-0.0024733	566.7974134435775	79.309	1.3993	79.858	79.234	80.633	0.54945	0.0070702	-0.00028266	NaN	49.211	63	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	713080	+		29827	25591	19968	19978							0.025551778867111352
LLFFHCIIK	9	Unmodified	_LLFFHCIIK_					0	0	0			REV__ENST00000539909.5_1_10:76468199-76468310:+|nuORF	REV__ENST00000539909.5_1_10:76468199-76468310:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3306884765625	2	567.33063	1132.64671	-0.50942	-0.00028901	0.35369	0.00020066	-0.15573	-8.8351E-05	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.7932	1	10626	10626		8.2313	0.54101	1	5685000	+		29828	28456	19969	19979	33912	33912					0.08569031261276905
LLFFLATC	8	Unmodified	_LLFFLATC_					0	0	0			REV__nc|ENSG00000157703|Q8N434-2|SVOPL	REV__nc|ENSG00000157703|Q8N434-2|SVOPL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25347900390625	2	464.254057	926.493561	-1.1814	-0.00054845	1.1549	0.00053618	-0.026428	-1.2269E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.87276	1	7813	7813		29.842	1.9593	1	946850	+		29829	20559	19970	19980	33913	33913					0.027374161448278755
LLFGDPCTFQ	10	Unmodified	_LLFGDPCTFQ_					0	0	0			REV__nc|ENSG00000130643|Q9NYX4-2|CALY	REV__nc|ENSG00000130643|Q9NYX4-2|CALY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.271240234375	2	570.773342	1139.53213	-1.1215	-0.00064012	-2.7927	-0.001594	-3.9142	-0.0022341	571.2731771324486	59.343	1.7285	59.329	58.466	60.195	-0.013733					93	51	2	0	0	0	0.70553	1	5431	5431		44.377	2.9506	1	112100	+		29830	18888	19971	19981	33914	33914					-0.032053230113206155
LLFGSGVL	8	Unmodified	_LLFGSGVL_					0	0	0		nc|ENSG00000143951|O95876-2|WDPCP;ENSG00000143951|ENST00000272321|WDPCP;ENST00000409835.5_1_2:63587012-63815411:-|nuORF;ENST00000493315.1_1_2:63631156-63711794:-|nuORF	nc|ENSG00000143951|O95876-2|WDPCP	nc|ENSG00000143951|O95876-2|WDPCP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747985839844	2	403.244547	804.47454	-0.088917	-3.5855E-05	0.65799	0.00026533	0.56908	0.00022948	403.24370664508285	82.597	0.21127	83.071	82.919	83.13	0.47383					6	4	2	0	0	0	0.4196	1	9586	9586		13.775	3.5906	1	34181			29831	4678	19972	19982	33915	33915					0.06448202845422202
LLFGSLSA	8	Unmodified	_LLFGSLSA_					0	0	0			REV__ENST00000393946.6_1_11:66774383-66774566:+|nuORF	REV__ENST00000393946.6_1_11:66774383-66774566:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.2315979003906	2	404.234179	806.453805	0.76489	0.0003092	-3.732	-0.0015086	-2.9671	-0.0011994	404.2325671203917	85.114	3.6255	85.042	83.452	87.078	-0.07196					165	83	2	0	0	0	0.884	1	8671	8671		33.516	0	1	4970800	+		29832	26070	19973	19983	33916	33916					0.042836124657469554
LLFGVSGAIL	10	Unmodified	_LLFGVSGAIL_					0	0	0			REV__ENSG00000137103|ENST00000643932|TMEM8B	REV__ENSG00000137103|ENST00000643932|TMEM8B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.303466796875	2	495.305136	988.595718	-0.66585	-0.0003298	0.93457	0.0004629	0.26872	0.0001331	495.3054548955284	64.721	0.78749	65.107	64.732	65.519	0.38615					39	18	3	0	0	0	0.67608	1	6987	6987		45.952	1.4209	1	274140	+		29833	19361	19974	19984	33917	33917					0.10096405488093296
LLFGVVNLL	9	Unmodified	_LLFGVVNLL_					0	0	0			REV__nc|ENSG00000168398|P30411-2|BDKRB2	REV__nc|ENSG00000168398|P30411-2|BDKRB2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3009033203125	2	494.315503	986.616454	-0.589	-0.00029115	1.9462	0.00096202	1.3572	0.00067087	494.31496677322673	97.13	1.1314	97.361	96.999	98.13	0.23103					47	26	3	0	0	0	0.20789	1	10121	10121		25.45	0	1	341140	+		29834	21484	19975	19985	33918	33918					0.12260995867757174
LLFHPATAKPL	11	Unmodified	_LLFHPATAKPL_					0	0	0		ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;ENST00000470300.5_1_1:247027247-247061635:-|nuORF;ENST00000420969.1_1_2:162360026-162361742:-|nuORF	ENSG00000153207|ENST00000648844|AHCTF1	ENSG00000153207|ENST00000648844|AHCTF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.24688720703125	3	403.24477	1206.71248	3.1806	0.0012826	2.1516	0.00086761	5.3322	0.0021502	403.2455898338112	104.57	4.2773	104.61	103.55	107.83	0.039864					310	101	5	0	0	0	0.76579	1	11492	11492		18.531	6.5987	1	15278000			29835	5221	19976	19986	33919	33919					0.11739143707836774
LLFIGLGIFFC	11	Unmodified	_LLFIGLGIFFC_					0	0	0		ENST00000437800.6_1_12:6925109-6928492:+|nuORF;ENSG00000010610|ENST00000011653|CD4	ENST00000437800.6_1_12:6925109-6928492:+|nuORF	ENST00000437800.6_1_12:6925109-6928492:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.8510131835938	2	621.851396	1241.68824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.034	1	61.423	60.923	61.923	0.38945								0	0	0	0.56276	1	6500	6500		31.955	9.3752	1				29836	770	19977	19987	33920	33920					0.07706167229957828
LLFILGAG	8	Unmodified	_LLFILGAG_					0	0	0		ENST00000526343.5_1_11:102100776-102101010:+|nuORF	ENST00000526343.5_1_11:102100776-102101010:+|nuORF	ENST00000526343.5_1_11:102100776-102101010:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.2524108886719	2	402.254914	802.495276	-1.9383	-0.0007797	-4.035	-0.0016231	-5.9733	-0.0024028	402.2532360311715	19.929	0.38907	19.973	19.802	20.191	0.043747					30	18	2	0	0	0	0.84567	1	447	447		24.504	0.30126	1	127490			29837	13258	19978	19988	33921	33921					0.08612793225097448
LLFILLWH	8	Unmodified	_LLFILLWH_					0	0	0		ENSG00000126246|ENST00000246532|IGFLR1	ENSG00000126246|ENST00000246532|IGFLR1	ENSG00000126246|ENST00000246532|IGFLR1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.8143310546875	2	527.826038	1053.63752	-0.33349	-0.00017603	2.3234	0.0012264	1.9899	0.0010503	528.3279640573974	46.642	2.1729	46.613	45.497	47.67	-0.028782					72	57	2	0	0	0	0.4196	1	3780	3780		24.504	0	1	412860			29838	3448	19979	19989	33922	33922					0.11285005967260986
LLFIRLTQ	8	Unmodified	_LLFIRLTQ_					0	0	0			REV__ENST00000361641.5_1_1:184041403-184041994:+|nuORF	REV__ENST00000361641.5_1_1:184041403-184041994:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.7851867675781	2	502.318577	1002.6226	-1.1351	-0.00057019	-1.6359	-0.00082174	-2.771	-0.0013919	502.31742772085937	43.807	0.36596	44.581	44.384	44.75	0.77379					17	8	3	0	0	0	0.4196	1	4001	4001		27.882	20.192	1	287350	+		29839	25508	19980	19990	33923	33923					0.12139514099260396
LLFITSGT	8	Unmodified	_LLFITSGT_					0	0	0		nc|ENSG00000188611|Q9NR71-2|ASAH2;ENSG00000188611|ENST00000682911|ASAH2	nc|ENSG00000188611|Q9NR71-2|ASAH2	nc|ENSG00000188611|Q9NR71-2|ASAH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2458801269531	2	426.247286	850.48002	-0.1821	-7.7619E-05	-2.626	-0.0011193	-2.8081	-0.0011969	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.81724	1	8946	8946		14.664	0	1	3805200			29840	7941	19981	19991	33924	33924					0.04879881637236849
LLFIVLTSVD	10	Unmodified	_LLFIVLTSVD_					0	0	0			REV__ENST00000508517.1_1_5:114938829-114955926:+|nuORF	REV__ENST00000508517.1_1_5:114938829-114955926:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3410034179688	2	560.336633	1118.65871	3.1454	0.0017625	3.4672	0.0019428	6.6126	0.0037053	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.86452	1	13138	13138		30.504	1.3541	1	151040	+		29841	27928	19982	19992	33925	33925					0.10412926485469143
LLFKLKETT	9	Unmodified	_LLFKLKETT_					0	0	0		ENST00000508483.1_1_4:175237641-175237719:+|nuORF	ENST00000508483.1_1_4:175237641-175237719:+|nuORF	ENST00000508483.1_1_4:175237641-175237719:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8399658203125	2	546.8368	1091.65905	3.386	0.0018516	1.8298	0.0010006	5.2158	0.0028522	546.8379771318001	101.02	3.777	100.97	100.36	104.13	-0.052116					284	90	6	0	0	0	0.64922	1	11002	11002		44.117	1.6423	1	39176000			29842	12975	19983	19993	33926	33926					0.11688346205323796
LLFKLKETT	9	Unmodified	_LLFKLKETT_					0	0	0		ENST00000508483.1_1_4:175237641-175237719:+|nuORF	ENST00000508483.1_1_4:175237641-175237719:+|nuORF	ENST00000508483.1_1_4:175237641-175237719:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.83984375	2	546.8368	1091.65905	1.265	0.00069175	4.2188	0.002307	5.4838	0.0029987	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.62081	2	10864	10864;11099		45.952	3.5558	1	39577000			29843	12975	19983	19993	33927;33928	33927					0.11688346205323796
LLFKLKETT	9	Unmodified	_LLFKLKETT_					0	0	0		ENST00000508483.1_1_4:175237641-175237719:+|nuORF	ENST00000508483.1_1_4:175237641-175237719:+|nuORF	ENST00000508483.1_1_4:175237641-175237719:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.8406982421875	2	546.8368	1091.65905	2.1574	0.0011797	3.8395	0.0020996	5.9968	0.0032793	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.74721	5	12271	12190;12259;12271;12295;12374		37.159	4.3467	1	10074000			29844	12975	19983	19993	33929;33930;33931;33932;33933	33931					0.11688346205323796
LLFLFGMLSVK	11	Unmodified	_LLFLFGMLSVK_					0	0	0			REV__ENSG00000221955|ENST00000469902|SLC12A8	REV__ENSG00000221955|ENST00000469902|SLC12A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3768920898438	2	634.377778	1266.741	0.93389	0.00059244	-1.8317	-0.001162	-0.89777	-0.00056953	634.3765130028539	118.8	0.2215	118.86	118.79	119.01	0.060577					18	8	3	0	0	0	0.7434	1	12500	12500		23.523	1.5628	1	457870	+		29845	23719	19984	19994	33934	33934					0.11830125292749472
LLFLFPPSL	9	Unmodified	_LLFLFPPSL_					0	0	0			REV__ENST00000375789.6_1_6:31696994-31697045:-|nuORF	REV__ENST00000375789.6_1_6:31696994-31697045:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.303466796875	2	523.817879	1045.6212	0.91547	0.00047954	3.8197	0.0020008	4.7351	0.0024803	523.8200263205212	87.497	0.66633	87.943	87.766	88.432	0.44628					19	15	2	0	0	0	0.20789	1	10309	10309		7.1934	0	1	96415	+		29846	25823	19985	19995	33935	33935					0.10021880010503992
LLFLGSFVRR	10	Unmodified	_LLFLGSFVRR_					0	0	0			REV__ENST00000575942.1_1_16:4395672-4395975:-|nuORF	REV__ENST00000575942.1_1_16:4395672-4395975:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3666381835938	2	604.369133	1206.72371	-0.12671	-7.6581E-05	-3.5023	-0.0021167	-3.629	-0.0021933	604.3667576937121	114.61	2.863	114.64	114.11	116.97	0.026466					110	87	2	0	0	0	0.85958	1	12566	12566		15.642	4.1308	1	97003	+		29847	28988	19986	19996	33936	33936					0.12861965801971564
LLFLGSFVRR	10	Unmodified	_LLFLGSFVRR_					0	0	0			REV__ENST00000575942.1_1_16:4395672-4395975:-|nuORF	REV__ENST00000575942.1_1_16:4395672-4395975:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3663940429688	2	604.369133	1206.72371	-1.2751	-0.00077064	-2.39	-0.0014444	-3.6651	-0.0022151	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.86718	1	12278	12278		27.882	8.7787	1	3346600	+		29848	28988	19986	19996	33937	33937					0.12861965801971564
LLFLIANVVHE	11	Unmodified	_LLFLIANVVHE_					0	0	0			REV__ENST00000577286.5_1_17:79993838-79994415:-|nuORF	REV__ENST00000577286.5_1_17:79993838-79994415:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3766479492188	2	634.374081	1266.73361	1.3188	0.00083664	3.8961	0.0024716	5.215	0.0033083	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.72918	1	13137	13137		26.693	3.1702	1	12917000	+		29849	21599	19987	19997	33938	33938					0.11091109016706469
LLFLLLLFF	9	Unmodified	_LLFLLLLFF_					0	0	0		ENST00000261254.7_1_12:4412550-4412766:+|nuORF	ENST00000261254.7_1_12:4412550-4412766:+|nuORF	ENST00000261254.7_1_12:4412550-4412766:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.871337890625	2	569.867372	1137.72019	1.007	0.00057386	1.6743	0.00095414	2.6813	0.001528	569.8682256506758	16.729	0.21048	16.118	16.048	16.259	-0.6107					7	4	2	0	0	0	0.78292	1	178	178		29.842	0	1	33552			29850	9403	19988	19998	33939	33939					0.1568390297543374
LLFLQAAYKDT	11	Unmodified	_LLFLQAAYKDT_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3624267578125	2	641.855721	1281.69689	1.7061	0.001095	4.3829	0.0028132	6.089	0.0039082	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.5603	1	12420	12420		47.657	4.7931	1	27133000			29851	7747	19989	19999	33940	33940					0.06730812400110153
LLFLTTTVLL	10	Unmodified	_LLFLTTTVLL_					0	0	0			REV__ENSG00000277556|ENST00000374779|OR13C5	REV__ENSG00000277556|ENST00000374779|OR13C5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3628540039062	2	567.36265	1132.71075	-0.94241	-0.00053469	1.9029	0.0010796	0.96052	0.00054496	567.3637060270148	42.168	1.9304	42.865	42.418	44.348	0.69754					144	47	5	0	0	0	0.86201	1	3827	3827		24.203	0	1	16501000	+		29852	24026	19990	20000	33941	33941					0.1497008989922506
LLFLVAGT	8	Unmodified	_LLFLVAGT_					0	0	0			REV__ENST00000489985.1_1_1:46661446-46663526:-|nuORF	REV__ENST00000489985.1_1_1:46661446-46663526:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.2586669921875	2	417.260197	832.50584	-2.1518	-0.00089787	-1.6828	-0.00070218	-3.8346	-0.0016	417.25934690137603	21.231	2.6146	21.231	20.572	23.187	0					203	120	3	0	0	0	0.87276	1	549	549		29.842	1.5873	1	250530	+		29853	16903	19991	20001	33942	33942					0.08288775879520927
LLFLVGTA	8	Unmodified	_LLFLVGTA_					0	0	0		ENSG00000179913|ENST00000318683|B3GNT3	ENSG00000179913|ENST00000318683|B3GNT3	ENSG00000179913|ENST00000318683|B3GNT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2581787109375	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.83466	1	518	518		23.037	0	1	817900			29854	7303	19992	20002	33943	33943					0.08288775879509558
LLFLVLPP	8	Unmodified	_LLFLVLPP_					0	0	0			REV__ENSG00000185933|ENST00000329905|CALHM1	REV__ENSG00000185933|ENST00000329905|CALHM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3007507324219	2	456.301865	910.589176	0.17352	7.9178E-05	-2.5195	-0.0011496	-2.346	-0.0010705	456.30054777495894	45.254	1.9566	45.236	44.141	46.098	-0.018585					90	45	3	0	0	0	0.84567	1	3583	3583		24.504	5.144	1	417410	+		29855	22807	19993	20003	33944	33944					0.1303051232736152
LLFLVLPP	8	Unmodified	_LLFLVLPP_					0	0	0			REV__ENSG00000185933|ENST00000329905|CALHM1	REV__ENSG00000185933|ENST00000329905|CALHM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3017883300781	2	456.301865	910.589176	-0.68927	-0.00031451	-0.87348	-0.00039857	-1.5627	-0.00071308	456.30128778001557	35.219	1.6098	35.163	34.768	36.378	-0.056385					101	36	5	0	0	0	0.84567	1	2359	2359		24.504	0	1	710350	+		29856	22807	19993	20003	33945	33945					0.1303051232736152
LLFLVLPP	8	Unmodified	_LLFLVLPP_					0	0	0			REV__ENSG00000185933|ENST00000329905|CALHM1	REV__ENSG00000185933|ENST00000329905|CALHM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30108642578125	2	456.301865	910.589176	-1.2643	-0.00057689	-0.1752	-7.9945E-05	-1.4395	-0.00065684	456.30161744594176	35.005	1.68	35.044	34.605	36.285	0.038643					125	54	3	0	0	0	0.84567	1	1840	1840		24.504	4.0222	1	565550	+		29857	22807	19993	20003	33946	33946					0.1303051232736152
LLFLVLPP	8	Unmodified	_LLFLVLPP_					0	0	0			REV__ENSG00000185933|ENST00000329905|CALHM1	REV__ENSG00000185933|ENST00000329905|CALHM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79132080078125	2	456.301865	910.589176	0.31869	0.00014542	-2.0655	-0.0009425	-1.7468	-0.00079708	456.3007535922368	51.645	1.2232	51.705	51.289	52.512	0.059719					67	38	2	0	0	0	0.4196	1	4086	4086		24.504	8.8622	1	147420	+		29858	22807	19993	20003	33947	33947					0.1303051232736152
LLFLVPPL	8	Unmodified	_LLFLVPPL_					0	0	0			REV__ENST00000495880.1_1_3:52083316-52083664:-|nuORF	REV__ENST00000495880.1_1_3:52083316-52083664:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30181884765625	2	456.301865	910.589176	-1.9609	-0.00089476	0.42413	0.00019353	-1.5368	-0.00070123	456.3019244318546	33.431	1.5568	33.431	33.135	34.692	0					145	44	4	0	0	0	0.84567	1	1878	1878		24.504	7.799	1	2313000	+		29859	27744	19994	20004	33948	33948					0.1303051232736152
LLFLVPPL	8	Unmodified	_LLFLVPPL_					0	0	0			REV__ENST00000495880.1_1_3:52083316-52083664:-|nuORF	REV__ENST00000495880.1_1_3:52083316-52083664:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.29913330078125	2	456.301865	910.589176	-1.2392	-0.00056545	-0.56259	-0.00025671	-1.8018	-0.00082216	456.3014948011369	49.504	1.4145	49.529	48.8	50.214	0.025578					54	35	2	0	0	0	0.84567	1	3834	3834		24.504	0	1	127180	+		29860	27744	19994	20004	33949	33949					0.1303051232736152
LLFLVPPL	8	Unmodified	_LLFLVPPL_					0	0	0			REV__ENST00000495880.1_1_3:52083316-52083664:-|nuORF	REV__ENST00000495880.1_1_3:52083316-52083664:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30096435546875	2	456.301865	910.589176	0.15231	6.9501E-05	-1.4837	-0.00067701	-1.3314	-0.00060751	456.30102814495837	33.268	1.6065	33.378	33.034	34.64	0.10991					186	70	4	0	0	0	0.84567	2	1624	1624;1659		54.895	0	1	1696300	+		29861	27744	19994	20004	33950;33951	33950					0.1303051232736152
LLFLVRLCSTT	11	Unmodified	_LLFLVRLCSTT_					0	0	0		ENST00000352732.9_1_15:89745032-89745188:+|nuORF	ENST00000352732.9_1_15:89745032-89745188:+|nuORF	ENST00000352732.9_1_15:89745032-89745188:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.36865234375	2	633.367941	1264.72133	1.4675	0.00092945	0.30921	0.00019584	1.7767	0.0011253	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.68431	2	9875	9665;9875		30.318	18.111	1	5460600			29862	10328	19995	20005	33952;33953	33953					0.09955749281994031
LLFLVRLCSTT	11	Unmodified	_LLFLVRLCSTT_					0	0	0		ENST00000352732.9_1_15:89745032-89745188:+|nuORF	ENST00000352732.9_1_15:89745032-89745188:+|nuORF	ENST00000352732.9_1_15:89745032-89745188:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3682861328125	2	633.367941	1264.72133	1.4714	0.00093196	0.41942	0.00026564	1.8909	0.0011976	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.72892	1	9977	9977		30.318	4.7437	1	11430000			29863	10328	19995	20005	33954	33954					0.09955749281994031
LLFMMAGMTV	10	Unmodified	_LLFMMAGMTV_					0	0	0		ENST00000532085.1_1_11:118896547-118896784:-|nuORF;ENST00000529510.5_1_11:118895892-118896784:-|nuORF;ENST00000525102.5_1_11:118895622-118898521:-|nuORF;ENST00000525039.5_1_11:118895622-118898521:-|nuORF;nc|ENSG00000137700|O43826|SLC37A4;ENSG00000137700|ENST00000330775|SLC37A4;nc|ENSG00000137700|O43826-2|SLC37A4	ENST00000532085.1_1_11:118896547-118896784:-|nuORF	ENST00000532085.1_1_11:118896547-118896784:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.2827758789062	2	557.278892	1112.54323	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.718	1	58.805	58.305	59.305	0.087002								0	0	0	0.45132	1	5005	5005		40.573	1.7665	1				29864	4227	19996	20006	33955	33955					-0.008539602330529306
LLFMQRKQKIY	11	Unmodified	_LLFMQRKQKIY_					0	0	0			REV__ENSG00000163885|ENST00000352312|CFAP100	REV__ENSG00000163885|ENST00000352312|CFAP100	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.9544982910156	3	489.955002	1466.84318	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.545	1	62.659	62.159	63.159	0.11388								0	0	0	0.56276	1	5451	5451		20.837	0.52214	1		+		29865	20992	19997	20007	33956	33956					0.12842791364391815
LLFPGRPVQ	9	Unmodified	_LLFPGRPVQ_					0	0	0		ENST00000559084.1_1_14:24760067-24760244:-|nuORF	ENST00000559084.1_1_14:24760067-24760244:-|nuORF	ENST00000559084.1_1_14:24760067-24760244:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8092041015625	2	513.808377	1025.6022	0.36714	0.00018864	1.0087	0.00051826	1.3758	0.0007069	513.8088609518841	50.93	1.0953	50.98	50.541	51.637	0.049896					79	32	3	0	0	0	0.7932	1	4102	4102		17.365	0	1	394250			29866	13804	19998	20008	33957	33957					0.09042343439477918
LLFPLLARERH	11	Unmodified	_LLFPLLARERH_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;ENST00000558780.5_2_14:24649650-24651621:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.60833740234375	3	455.610223	1363.80884	-0.55128	-0.00025117	-3.3551	-0.0015286	-3.9064	-0.0017798	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.69071	2	7062	7003;7062		33.039	5.0373	1	1732400			29867	8063	19999	20009	33958;33959	33959					0.14148711267785075
LLFPLLARERH	11	Unmodified	_LLFPLLARERH_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;ENST00000558780.5_2_14:24649650-24651621:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.60931396484375	3	455.610223	1363.80884	-0.02024	-9.2214E-06	-3.9525	-0.0018008	-3.9727	-0.00181	455.608304720296	65.806	3.5163	66.359	63.877	67.393	0.5526					173	94	4	0	0	0	0.69071	3	7104	7000;7033;7104		33.039	8.6562	1	1863500			29868	8063	19999	20009	33960;33961;33962	33962					0.14148711267785075
LLFPQLRRR	9	Unmodified	_LLFPQLRRR_					0	0	0		ENST00000584373.1_1_18:19747131-19747582:-|nuORF;ENST00000583490.1_1_18:19747131-19747299:-|nuORF	ENST00000584373.1_1_18:19747131-19747582:-|nuORF	ENST00000584373.1_1_18:19747131-19747582:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2567443847656	3	400.255891	1197.74584	0.45646	0.0001827	3.7737	0.0015104	4.2301	0.0016931	400.25729523506845	15.426	0.21626	15.401	15.269	15.485	-0.024207					11	6	2	0	0	0	0.7932	1	31	31		13.454	0	1	92941			29869	14122	20000	20010	33963	33963					0.15488190270389168
LLFPRLMLLLD	11	Unmodified	_LLFPRLMLLLD_					0	0	0		ENST00000254250.7_1_8:42693388-42694372:-|nuORF;nc|ENSG00000131931|Q9NVV9-2|THAP1	ENST00000254250.7_1_8:42693388-42694372:-|nuORF	ENST00000254250.7_1_8:42693388-42694372:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.3084716796875	3	448.608831	1342.80467	-0.80423	-0.00036079	1.9815	0.00088892	1.1773	0.00052813	448.6094476095666	79.592	1.1898	80.008	79.232	80.422	0.41621					56	27	3	0	0	0	0.17243	1	9174	9174		28.577	4.3449	1	178410			29870	9319	20001	20011	33964	33964					0.146974857298801
LLFPVTIFV	9	Unmodified	_LLFPVTIFV_					0	0	0			REV__nc|ENSG00000174970|Q8NH19|OR10AG1	REV__nc|ENSG00000174970|Q8NH19|OR10AG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.826416015625	2	524.825704	1047.63685	-0.038871	-2.04E-05	3.1603	0.0016586	3.1214	0.0016382	524.8272063900822	102.47	1.0685	102.49	101.99	103.06	0.01989					58	25	3	0	0	0	0.7932	1	10984	10984		25.45	3.4903	1	402610	+		29871	22032	20002	20012	33965	33965					0.1149416652756372
LLFQNAFAQQ	10	Unmodified	_LLFQNAFAQQ_					0	0	0		ENST00000324799.4_1_X:148606549-148607579:+|nuORF;nc|ENSG00000241489|P22304-3|IDS;nc|ENSG00000241489|P22304-2|IDS;ENSG00000010404|ENST00000340855|IDS	ENST00000324799.4_1_X:148606549-148607579:+|nuORF	ENST00000324799.4_1_X:148606549-148607579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.3088989257812	2	590.31148	1178.60841	-1.7703	-0.001045	-1.9046	-0.0011243	-3.6748	-0.0021693	590.3101530818265	32.444	0.60775	32.438	32.214	32.822	-0.0061455					35	14	3	0	0	0	0.8608	1	1867	1867		34.173	6.0911	1	138260			29872	769	20003	20013	33966	33966					0.026248168803022054
LLFQVGYKKR	10	Unmodified	_LLFQVGYKKR_					0	0	0			REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.390380859375	2	626.38224	1250.74993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.64	1	110.69	110.19	111.19	0.049095								0	0	0	0.45132	1	13431	13431		29.15	0	1		+		29873	19889	20004	20014	33967	33967					0.1345823497345009
LLFRAQPI	8	Unmodified	_LLFRAQPI_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2979736328125	2	479.297645	956.580737	-0.46769	-0.00022416	0.69766	0.00033439	0.22997	0.00011022	479.2977943251352	57.596	1.6193	57.99	57.574	59.193	0.39407					92	39	4	0	0	0	0.92973	1	5974	5974		50.025	3.2581	1	5272200	+		29874	18791	20005	20015	33968	33968					0.10070958410744879
LLFRESEAR	9	Unmodified	_LLFRESEAR_					0	0	0		ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402099609375	2	560.809105	1119.60366	-1.4171	-0.00079471	-2.5081	-0.0014065	-3.9251	-0.0022013	560.807849130985	102.11	0.1993	102.24	102.06	102.26	0.13569					6	4	2	0	0	0	0.20789	1	10675	10675		20.947	0	1	182540			29875	5530	20006	20016	33969	33969					0.04863932737566756
LLFRHVLNFLR	11	Unmodified	_LLFRHVLNFLR_					0	0	0		ENSG00000180332|ENST00000379108|KCTD4	ENSG00000180332|ENST00000379108|KCTD4	ENSG00000180332|ENST00000379108|KCTD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6240234375	3	476.625984	1426.85612	-1.6911	-0.000806	-3.0916	-0.0014735	-4.7826	-0.0022795	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.78683	1	12770	12770		14.086	0.57807	1	2577100			29876	7324	20007	20017	33970	33970					0.1597699053877477
LLFRSTPRM	9	Unmodified	_LLFRSTPRM_					0	0	0			REV__ENST00000269221.7_1_18:21083667-21084374:+|nuORF	REV__ENST00000269221.7_1_18:21083667-21084374:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8197631835938	2	560.818418	1119.62228	-0.54677	-0.00030664	2.9878	0.0016756	2.441	0.001369	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.78536	1	9141	9141		29.15	3.6994	1	408930	+		29877	24520	20008	20018	33971	33971					0.06725771107767287
LLFRTVFQEL	10	Unmodified	_LLFRTVFQEL_					0	0	0			REV__ENSG00000123119|ENST00000417640|NECAB1	REV__ENSG00000123119|ENST00000417640|NECAB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3684692382812	2	633.366256	1264.71796	2.3091	0.0014625	2.2296	0.0014121	4.5387	0.0028746	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.86446	1	11919	11919		32.812	1.2826	1	10333000	+		29878	18526	20009	20019	33972	33972					0.0961882249964674
LLFSENQLT	9	Unmodified	_LLFSENQLT_					0	0	0			REV__nc|ENSG00000107186|O75970-5|MPDZ	REV__nc|ENSG00000107186|O75970-5|MPDZ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.7704467773438	2	532.784764	1063.55498	-1.0592	-0.00056431	0.15686	8.3573E-05	-0.90231	-0.00048074	532.7847370523765	47.357	0.62213	48.28	47.999	48.622	0.92315					27	15	2	0	0	0	0.20789	1	4481	4481		19.104	0.77911	1	802920	+		29879	17649	20010	20020	33973	33973					0.025740193777892273
LLFSQKSAISR	11	Unmodified	_LLFSQKSAISR_					0	0	0		ENST00000529993.5_1_11:68171724-68216535:+|nuORF;ENSG00000162337|ENST00000294304|LRP5	ENST00000529993.5_1_11:68171724-68216535:+|nuORF	ENST00000529993.5_1_11:68171724-68216535:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	625.36767578125	2	625.366787	1248.71902	2.002	0.001252	-2.7549	-0.0017228	-0.75286	-0.00047081	625.364760825802	103.43	0.61937	103.66	103.42	104.04	0.22556					43	14	4	0	0	0	0.60058	1	12587	12587		44.377	1.5129	1	6468300			29880	5678	20011	20021	33974	33974					0.10461036868559859
LLFSSGLVLY	10	Unmodified	_LLFSSGLVLY_					0	0	0			REV__ENSG00000188763|ENST00000344575|FZD9	REV__ENSG00000188763|ENST00000344575|FZD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.3232421875	2	556.323525	1110.6325	0.14744	8.2024E-05	-0.4483	-0.0002494	-0.30086	-0.00016738	556.3233391513363	78.46	1.0152	78.87	78.551	79.566	0.41059					67	23	4	0	0	0	0.6398	1	8955	8955		47.916	1.9636	1	1360600	+		29881	23027	20012	20022	33975	33975					0.08160657314010678
LLFSTTAS	8	Unmodified	_LLFSTTAS_					0	0	0			REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2275695800781	2	420.229094	838.443634	-0.18765	-7.8855E-05	-2.6467	-0.0011122	-2.8344	-0.0011911	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.91005	1	7634	7634		42.474	6.8562	1	743780	+		29882	28400	20013	20023	33976	33976					0.017950047405292935
LLFSTTAS	8	Unmodified	_LLFSTTAS_					0	0	0			REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	REV__ENST00000536017.1_1_11:64053809-64053992:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2273254394531	2	420.229094	838.443634	-1.5729	-0.000661	-1.3827	-0.00058106	-2.9557	-0.0012421	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.86791	1	7529	7529		28.254	0	1	634680	+		29883	28400	20013	20023	33977	33977					0.017950047405292935
LLFTDGEL	8	Unmodified	_LLFTDGEL_					0	0	0			REV__ENSG00000104450|ENST00000388798|SPAG1	REV__ENSG00000104450|ENST00000388798|SPAG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	454.2423400878906	2	454.242201	906.469849	-1.5907	-0.00072257	1.8874	0.00085735	0.29673	0.00013479	454.2428961536622	82.982	1.1143	83.108	82.747	83.862	0.12601					33	25	2	0	0	0	0.37664	1	7974	7974		96.048	3.8571	1	218330	+		29884	17459	20014	20024	33978	33978					0.012872739120098231
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.873291015625	2	634.376092	1266.73763	-0.010875	-6.8991E-06	1.8505	0.0011739	1.8396	0.001167	634.3771999217482	108.93	0.2242	108.93	108.78	109	0					19	12	2	0	0	0	0.86452	1	11334	11334		30.504	2.4222	1	755630	+		29885	17157	20015	20025	33979	33979					0.1149319851040218
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3775634765625	2	634.376092	1266.73763	-0.13788	-8.7468E-05	1.6021	0.0010163	1.4642	0.00092887	634.3771360107617	113.13	0.47948	113.07	112.78	113.26	-0.067215					34	19	3	0	0	0	0.85694	1	12287	12287		21.96	2.8564	1	68253	+		29886	17157	20015	20025	33980	33980					0.1149319851040218
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3767700195312	2	634.376092	1266.73763	-0.13787	-8.7463E-05	1.8362	0.0011649	1.6984	0.0010774	634.377061455115	118.49	0.49898	118.42	118.19	118.69	-0.07531					48	18	4	0	0	0	0.85958	1	12732	12732		15.642	1.5047	1	1728300	+		29887	17157	20015	20025	33981	33981					0.1149319851040218
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3770141601562	2	634.376092	1266.73763	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.11	1	119.03	118.53	119.53	-0.07531								0	0	0	0.45132	1	12776	12776		24.203	0.68005	1		+		29888	17157	20015	20025	33982	33982					0.1149319851040218
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3768310546875	2	634.376092	1266.73763	1.3188	0.00083664	0.7255	0.00046024	2.0443	0.0012969	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.84112	9	12888	12329;12612;12621;12656;12671;12707;12757;12858;12888		37.159	10.466	1	12917000	+		29889	17157	20015	20025	33983;33984;33985;33986;33987;33988;33989;33990;33991	33991					0.1149319851040218
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8765869140625	2	634.376092	1266.73763	1.4899	0.00094515	-0.098523	-6.25E-05	1.3914	0.00088265	634.3759288253121	109.92	1.3103	110.04	109.37	110.68	0.12289					100	52	2	0	0	0	0.85934	1	11875	11875		35.618	5.0494	1	14976000	+		29890	17157	20015	20025	33992	33992					0.1149319851040218
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3768310546875	2	634.376092	1266.73763	1.4896	0.00094496	-0.10667	-6.7672E-05	1.3829	0.00087729	634.3759273521912	119	0.20064	119.09	119.04	119.24	0.087753					12	7	2	0	0	0	0.86589	1	12536	12536		29.15	8.2026	1	2529600	+		29891	17157	20015	20025	33993	33993					0.1149319851040218
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3763427734375	2	634.376092	1266.73763	0.93394	0.00059247	0.37956	0.00024078	1.3135	0.00083326	634.3760615979032	111.89	0.64575	111.96	111.47	112.12	0.069542					57	19	4	0	0	0	0.85694	1	12067	12067		21.96	1.1227	1	7169800	+		29892	17157	20015	20025	33994	33994					0.1149319851040218
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3766479492188	2	634.376092	1266.73763	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.55	1	114.61	114.11	115.11	0.061073								0	0	0	0.45132	1	12243	12243		35.618	5.3006	1		+		29893	17157	20015	20025	33995	33995					0.1149319851040218
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3740234375	2	634.376092	1266.73763	-1.1774	-0.00074694	3.2446	0.0020583	2.0671	0.0013113	634.3776223317757	111.13	0.41051	111.12	110.9	111.31	-0.0074387					40	17	3	0	0	0	0.85934	1	11833	11833		35.618	0.46626	1	240410	+		29894	17157	20015	20025	33996	33996					0.1149319851040218
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3757934570312	2	634.376092	1266.73763	2.1873	0.0013876	-0.14966	-9.4943E-05	2.0376	0.0012926	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.85939	1	13410	13410		23.042	1.0826	1	6886400	+		29895	17157	20015	20025	33997	33997					0.1149319851040218
LLFWLFTKLS	10	Unmodified	_LLFWLFTKLS_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.37451171875	2	634.376092	1266.73763	2.2041	0.0013982	-0.71034	-0.00045063	1.4938	0.00094761	634.8772103727367	111.31	0.1705	111.35	111.22	111.39	0.041832					12	6	2	0	0	0	0.85251	1	13456	13456		19.997	0	1	1529300	+		29896	17157	20015	20025	33998	33998					0.1149319851040218
LLFYRWRRRSH	11	Unmodified	_LLFYRWRRRSH_					0	0	0		nc|ENSG00000184371|P09603-3|CSF1;nc|ENSG00000184371|P09603-2|CSF1;ENSG00000184371|ENST00000329608|CSF1	nc|ENSG00000184371|P09603-3|CSF1	nc|ENSG00000184371|P09603-3|CSF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.9706420898438	3	530.635654	1588.88513	-0.15941	-8.4591E-05	-4.049	-0.0021486	-4.2085	-0.0022332	530.633588179504	38.167	0.5439	38.183	37.956	38.5	0.016563					32	15	3	0	0	0	0.81021	1	2263	2263		9.2118	3.2108	1	155150			29897	7605	20016	20026	33999	33999					0.1142452788776609
LLFYRWRRRSH	11	Unmodified	_LLFYRWRRRSH_					0	0	0		nc|ENSG00000184371|P09603-3|CSF1;nc|ENSG00000184371|P09603-2|CSF1;ENSG00000184371|ENST00000329608|CSF1	nc|ENSG00000184371|P09603-3|CSF1	nc|ENSG00000184371|P09603-3|CSF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.8468017578125	3	530.635654	1588.88513	0.80328	0.00042625	4.299	0.0022812	5.1023	0.0027075	530.6369006014744	22.849	0.091892	22.84	22.769	22.861	-0.0088215					6	4	2	0	0	0	0.18331	1	695	695		5.6988	0	1	48542			29898	7605	20016	20026	34000	34000					0.1142452788776609
LLGAAAAAQRA	11	Unmodified	_LLGAAAAAQRA_					0	0	0		ENST00000372491.3_1_9:131939009-131939333:-|nuORF	ENST00000372491.3_1_9:131939009-131939333:-|nuORF	ENST00000372491.3_1_9:131939009-131939333:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7991943359375	2	506.79854	1011.58253	0.2762	0.00013998	4.2956	0.002177	4.5718	0.002317	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.72918	1	3426	3426		26.693	1.2427	1	416790			29899	10703	20017	20027	34001	34001					0.07719967428693053
LLGAAGLLLA	10	Unmodified	_LLGAAGLLLA_					0	0	0			REV__nc|ENSG00000163453|Q16270-2|IGFBP7	REV__nc|ENSG00000163453|Q16270-2|IGFBP7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3019104003906	2	456.299853	910.585153	-0.75416	-0.00034412	3.5877	0.0016371	2.8336	0.001293	456.3012900851617	35.065	1.7041	35.071	34.727	36.431	0.0063934					112	39	4	0	0	0	0.70264	1	2276	2276		44.531	9.3304	1	634200	+		29900	20916	20018	20028	34002	34002					0.12628422833643071
LLGAAGLLLA	10	Unmodified	_LLGAAGLLLA_					0	0	0			REV__nc|ENSG00000163453|Q16270-2|IGFBP7	REV__nc|ENSG00000163453|Q16270-2|IGFBP7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3009338378906	2	456.299853	910.585153	-1.2643	-0.00057689	4.2328	0.0019314	2.9685	0.0013545	456.30161744594176	35.005	1.68	35.044	34.605	36.285	0.038643					125	54	3	0	0	0	0.86786	1	1821	1821		26.796	2.5934	1	565550	+		29901	20916	20018	20028	34003	34003					0.12628422833643071
LLGAAGLLLA	10	Unmodified	_LLGAAGLLLA_					0	0	0			REV__nc|ENSG00000163453|Q16270-2|IGFBP7	REV__nc|ENSG00000163453|Q16270-2|IGFBP7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30084228515625	2	456.299853	910.585153	-1.2554	-0.00057285	3.8227	0.0017443	2.5673	0.0011715	456.30134105223925	39.578	1.7678	39.585	38.842	40.609	0.0065002					91	49	3	0	0	0	0.85976	1	2455	2455		35.201	1.6851	1	547140	+		29902	20916	20018	20028	34004	34004					0.12628422833643071
LLGAAGLLLA	10	Unmodified	_LLGAAGLLLA_					0	0	0			REV__nc|ENSG00000163453|Q16270-2|IGFBP7	REV__nc|ENSG00000163453|Q16270-2|IGFBP7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3012390136719	2	456.299853	910.585153	0.20856	9.5165E-05	2.1915	0.00099997	2.4	0.0010951	456.3006822379284	39.411	1.6419	39.499	38.918	40.56	0.088371					97	45	3	0	0	0	0.85976	1	2410	2410		35.201	1.6851	1	525810	+		29903	20916	20018	20028	34005	34005					0.12628422833643071
LLGAAGLLLA	10	Unmodified	_LLGAAGLLLA_					0	0	0			REV__nc|ENSG00000163453|Q16270-2|IGFBP7	REV__nc|ENSG00000163453|Q16270-2|IGFBP7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7922668457031	2	456.299853	910.585153	0.016807	7.669E-06	2.4059	0.0010978	2.4227	0.0011055	456.3009410511469	38.066	1.2664	38.008	37.439	38.705	-0.057915					54	40	2	0	0	0	0.37624	1	2224	2224		35.201	0	1	212720	+		29904	20916	20018	20028	34006	34006					0.12628422833643071
LLGAAGLLLA	10	Unmodified	_LLGAAGLLLA_					0	0	0			REV__nc|ENSG00000163453|Q16270-2|IGFBP7	REV__nc|ENSG00000163453|Q16270-2|IGFBP7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7913818359375	2	456.299853	910.585153	-0.036271	-1.6551E-05	2.6086	0.0011903	2.5723	0.0011737	456.30089590428986	39.482	1.7239	39.429	38.71	40.434	-0.052731					108	51	3	0	0	0	0.37624	1	2400	2400		35.201	0	1	515440	+		29905	20916	20018	20028	34007	34007					0.12628422833643071
LLGAAGLLLA	10	Unmodified	_LLGAAGLLLA_					0	0	0			REV__nc|ENSG00000163453|Q16270-2|IGFBP7	REV__nc|ENSG00000163453|Q16270-2|IGFBP7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.792724609375	2	456.299853	910.585153	-2.4309	-0.0011092	2.6135	0.0011925	0.18262	8.3329E-05	456.30094820424404	40.346	2.401	40.738	38.906	41.307	0.39209					94	60	3	0	0	0	0.37624	1	3332	3332		26.796	13.837	1	1981500	+		29906	20916	20018	20028	34008	34008					0.12628422833643071
LLGAAGLLLA	10	Unmodified	_LLGAAGLLLA_					0	0	0			REV__nc|ENSG00000163453|Q16270-2|IGFBP7	REV__nc|ENSG00000163453|Q16270-2|IGFBP7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7930908203125	2	456.299853	910.585153	-0.69767	-0.00031835	3.3288	0.0015189	2.6312	0.0012006	456.3012760418356	37.853	1.0416	38.166	37.786	38.828	0.31312					48	26	3	0	0	0	0.37624	1	3038	3038		19.36	0	1	1647700	+		29907	20916	20018	20028	34009	34009					0.12628422833643071
LLGAAGRKN	9	Unmodified	_LLGAAGRKN_					0	0	0		nc|ENSG00000007062|O43490-5|PROM1;nc|ENSG00000007062|O43490-3|PROM1;nc|ENSG00000007062|O43490-4|PROM1;nc|ENSG00000007062|O43490-6|PROM1;nc|ENSG00000007062|O43490-7|PROM1;nc|ENSG00000007062|O43490-2|PROM1;ENSG00000007062|ENST00000447510|PROM1	nc|ENSG00000007062|O43490-5|PROM1	nc|ENSG00000007062|O43490-5|PROM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2743835449219	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.7932	1	9376	9376		25.45	2.4077	1	41438000			29908	718	20019	20029	34010	34010					0.08152313228504227
LLGAALLY	8	Unmodified	_LLGAALLY_					0	0	0		ENSG00000174607|ENST00000310836|UGT8	ENSG00000174607|ENST00000310836|UGT8	ENSG00000174607|ENST00000310836|UGT8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2579040527344	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.84567	1	586	586		24.504	1.4673	1	679020			29909	6951	20020	20030	34011	34011					0.08288775879509558
LLGAFKRK	8	Unmodified	_LLGAFKRK_					0	0	0			REV__ENSG00000139618|ENST00000380152|BRCA2	REV__ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.80548095703125	2	466.805637	931.596721	-1.9392	-0.00090521	3.4764	0.0016228	1.5372	0.00071757	466.8071062107657	31.294	1.1887	31.294	30.953	32.141	0					86	41	3	0	0	0	0.81724	1	1478	1478		14.664	1.7049	1	152630	+		29910	19554	20021	20031	34012	34012					0.12818664647659261
LLGAFKRK	8	Unmodified	_LLGAFKRK_					0	0	0			REV__ENSG00000139618|ENST00000380152|BRCA2	REV__ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.8056945800781	2	466.805637	931.596721	-0.25933	-0.00012106	1.8679	0.00087195	1.6086	0.00075089	466.80631326130225	31.324	1.1632	31.272	30.944	32.108	-0.051033					55	26	3	0	0	0	0.884	1	1772	1772		33.516	3.674	1	77668	+		29911	19554	20021	20031	34013	34013					0.12818664647659261
LLGAGVAVLV	10	Unmodified	_LLGAGVAVLV_					0	0	0			REV__ENST00000505306.5_1_17:48154319-48165696:+|nuORF	REV__ENST00000505306.5_1_17:48154319-48165696:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3010559082031	2	456.299853	910.585153	-1.2643	-0.00057689	4.2328	0.0019314	2.9685	0.0013545	456.30161744594176	35.005	1.68	35.044	34.605	36.285	0.038643					125	54	3	0	0	0	0.86786	1	1830	1830		26.796	5.0938	1	565550	+		29912	27877	20022	20032	34014	34014					0.12628422833643071
LLGAIIVIIRK	11	Unmodified	_LLGAIIVIIRK_					0	0	0		nc|ENSG00000060656|Q92729-3|PTPRU;ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3663940429688	2	604.926283	1207.83801	0.9047	0.00054728	-2.0909	-0.0012648	-1.1862	-0.00071757	604.9242024091059	104.53	0.34858	104.64	104.4	104.75	0.11684					11	8	2	0	0	0	0.18058	1	11086	11086		10.265	2.575	1	132670			29913	1066	20023	20033	34015	34015					0.24240855564062258
LLGAKVVVI	9	Unmodified	_LLGAKVVVI_					0	0	0		ENSG00000243156|ENST00000441493|MICAL3;nc|ENSG00000243156|Q7RTP6-2|MICAL3;nc|ENSG00000243156|Q7RTP6-4|MICAL3;nc|ENSG00000243156|Q7RTP6-3|MICAL3;nc|ENSG00000243156|Q7RTP6-5|MICAL3	ENSG00000243156|ENST00000441493|MICAL3	ENSG00000243156|ENST00000441493|MICAL3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7929992675781	2	456.318046	910.621539	-1.2609	-0.00057539	0.88939	0.00040584	-0.37156	-0.00016955	456.31863513779524	39.291	0.32925	39.244	39.118	39.447	-0.047001					11	7	2	0	0	0	0.20789	1	2818	2818		26.796	1.3459	1	27941			29914	8805	20024	20034	34016	34016					0.16265299730378047
LLGALDIP	8	Unmodified	_LLGALDIP_					0	0	0			REV__ENSG00000125676|ENST00000245838|THOC2	REV__ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24853515625	2	406.249829	810.485105	0.64458	0.00026186	-3.2845	-0.0013343	-2.6399	-0.0010725	406.248379767224	90.786	2.0194	90.94	90.429	92.448	0.15388					81	48	3	0	0	0	0.87276	1	9106	9106		29.842	1.5873	1	878080	+		29915	18657	20025	20035	34017	34017					0.07228185499855044
LLGALDIP	8	Unmodified	_LLGALDIP_					0	0	0			REV__ENSG00000125676|ENST00000245838|THOC2	REV__ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2481689453125	2	406.249829	810.485105	-1.9277	-0.00078311	-1.0996	-0.00044672	-3.0273	-0.0012298	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.82464	1	8653	8653		21.702	0	1	31099000	+		29916	18657	20025	20035	34018	34018					0.07228185499855044
LLGALEAPV	9	Unmodified	_LLGALEAPV_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7684326171875	2	441.768386	881.522219	-0.15332	-6.7733E-05	-0.82572	-0.00036478	-0.97905	-0.00043251	441.76810949175115	107.35	0.84094	107.31	106.9	107.75	-0.034409					58	19	4	0	0	0	0.69914	1	11730	11730		40.573	7.057	1	1492500	+		29917	17017	20026	20036	34019	34019					0.07671857045602337
LLGALEAPV	9	Unmodified	_LLGALEAPV_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	441.768386	881.522219	0.7429	0.00032819	-1.3565	-0.00059926	-0.6136	-0.00027107	441.76766724119915	107.18	0.94418	107.27	106.73	107.68	0.091255	0.030003	0.00058887	NaN	40.573	49	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1199900	+		29918	17017	20026	20036							0.07671857045602337
LLGALEAPV	9	Unmodified	_LLGALEAPV_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	441.768386	881.522219	-1.8019	-0.00079602	0.45116	0.00019931	-1.3507	-0.00059672	441.76877576650287	107.24	0.77241	107.27	106.89	107.67	0.036118	0.030925	0.002186	NaN	40.573	54	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1132300	+		29919	17017	20026	20036							0.07671857045602337
LLGALLMFP	9	Unmodified	_LLGALLMFP_					0	0	0		ENSG00000101276|ENST00000645534|SLC52A3	ENSG00000101276|ENST00000645534|SLC52A3	ENSG00000101276|ENST00000645534|SLC52A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906799316406	2	487.790807	973.56706	-0.085473	-4.1693E-05	-0.2767	-0.00013497	-0.36217	-0.00017666	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.78292	1	8305	8305		29.842	1.5873	1	1889700			29920	1924	20027	20037	34020	34020					0.0792196458729677
LLGANKIALP	10	Unmodified	_LLGANKIALP_					0	0	0			REV__ENSG00000186334|ENST00000335230|SLC36A3	REV__ENSG00000186334|ENST00000335230|SLC36A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	505.3235168457031	2	505.32386	1008.63317	0.6276	0.00031714	-0.79233	-0.00040038	-0.16474	-8.3245E-05	505.3232988221178	80.75	1.1448	80.893	80.485	81.63	0.14352					67	27	4	0	0	0	0.67608	1	7718	7718		45.952	10.334	1	642300	+		29921	22844	20028	20038	34021	34021					0.12919496753693238
LLGAPGVGK	9	Unmodified	_LLGAPGVGK_					0	0	0		ENSG00000166592|ENST00000299759|RRAD	ENSG00000166592|ENST00000299759|RRAD	ENSG00000166592|ENST00000299759|RRAD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2570495605469	2	406.255446	810.496338	0.27279	0.00011082	3.6804	0.0014952	3.9532	0.001606	406.25677816056157	49.48	2.6493	49.522	48.485	51.134	0.042236					135	72	3	0	0	0	0.7932	1	3742	3742		24.203	2.5004	1	326490			29922	6215	20029	20039	34022	34022					0.08351007594001203
LLGAPGVGK	9	Unmodified	_LLGAPGVGK_					0	0	0		ENSG00000166592|ENST00000299759|RRAD	ENSG00000166592|ENST00000299759|RRAD	ENSG00000166592|ENST00000299759|RRAD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2567443847656	2	406.255446	810.496338	0.40708	0.00016538	3.217	0.0013069	3.624	0.0014723	406.25658192543807	64.684	1.5075	64.808	63.9	65.408	0.12397					94	59	2	0	0	0	0.7932	1	5773	5773		24.203	3.7209	1	141770			29923	6215	20029	20039	34023	34023					0.08351007594001203
LLGAPRCL	8	Unmodified	_LLGAPRCL_					0	0	0		ENSG00000122254|ENST00000261374|HS3ST2	ENSG00000122254|ENST00000261374|HS3ST2	ENSG00000122254|ENST00000261374|HS3ST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7518005371094	2	421.749473	841.484393	2.261	0.00095358	2.5621	0.0010806	4.8232	0.0020342	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.85277	1	7444	7444		25.45	4.9683	1	532850			29924	3216	20030	20040	34024	34024					0.057310675791541144
LLGAPSLLV	9	Unmodified	_LLGAPSLLV_					0	0	0			REV__ENST00000534634.5_1_11:71164292-71164355:+|nuORF	REV__ENST00000534634.5_1_11:71164292-71164355:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78741455078125	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.67235	1	2629	2629		42.474	7.2737	1	10215000	+		29925	28371	20031	20041	34025	34025					0.11308733942337312
LLGAQPLL	8	Unmodified	_LLGAQPLL_					0	0	0		ENSG00000004939|ENST00000262418|SLC4A1;nc|ENSG00000004939|P02730-2|SLC4A1;nc|ENSG00000164889|P04920-2|SLC4A2;nc|ENSG00000164889|P04920-3|SLC4A2;ENSG00000164889|ENST00000413384|SLC4A2;nc|ENSG00000114923|P48751-3|SLC4A3;ENSG00000114923|ENST00000358055|SLC4A3;nc|ENSG00000114923|P48751-2|SLC4A3;ENST00000425141.5_1_2:220498093-220506447:+|nuORF	ENSG00000004939|ENST00000262418|SLC4A1;nc|ENSG00000164889|P04920-2|SLC4A2;nc|ENSG00000114923|P48751-3|SLC4A3	nc|ENSG00000114923|P48751-3|SLC4A3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7668151855469	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.87276	1	2839	2839		29.842	0	1	681490			29926	14857;6017;668	20032	20042	34026	34026					0.09792178253815109
LLGARALPGGS	11	Unmodified	_LLGARALPGGS_					0	0	0			REV__ENSG00000184992|ENST00000341446|BRI3BP	REV__ENSG00000184992|ENST00000341446|BRI3BP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3005676269531	2	506.300916	1010.58728	0.76933	0.00038951	-0.62293	-0.00031539	0.1464	7.4122E-05	506.30057654183594	96.316	1.2031	96.479	95.934	97.138	0.16317					64	27	3	0	0	0	0.64498	1	9917	9917		39.253	3.6345	1	470040	+		29927	22721	20033	20043	34027	34027					0.08240851571486019
LLGARSRAS	9	Unmodified	_LLGARSRAS_					0	0	0			REV__ENST00000372906.2_1_20:43104570-43108633:+|nuORF	REV__ENST00000372906.2_1_20:43104570-43108633:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7784729003906	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.054	1	79.001	78.501	79.501	-0.053558								0	0	0	0.32039	1	7899	7899		44.117	6.9577	1		+		29928	25739	20034	20044	34028	34028					0.07307411740180214
LLGARSRAS	9	Unmodified	_LLGARSRAS_					0	0	0			REV__ENST00000372906.2_1_20:43104570-43108633:+|nuORF	REV__ENST00000372906.2_1_20:43104570-43108633:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7774353027344	2	465.777608	929.540663	-1.0371	-0.00048307	0.85648	0.00039893	-0.18065	-8.4142E-05	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.76255	1	7741	7741		35.618	5.1146	1	1384500	+		29929	25739	20034	20044	34029	34029					0.07307411740180214
LLGARSRAS	9	Unmodified	_LLGARSRAS_					0	0	0			REV__ENST00000372906.2_1_20:43104570-43108633:+|nuORF	REV__ENST00000372906.2_1_20:43104570-43108633:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77740478515625	2	465.777608	929.540663	0.60386	0.00028126	-0.75167	-0.00035011	-0.14781	-6.8848E-05	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.77244	1	7888	7888		32.812	2.3088	1	1082300	+		29930	25739	20034	20044	34030	34030					0.07307411740180214
LLGARSRAS	9	Unmodified	_LLGARSRAS_					0	0	0			REV__ENST00000372906.2_1_20:43104570-43108633:+|nuORF	REV__ENST00000372906.2_1_20:43104570-43108633:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7774963378906	2	465.777608	929.540663	-1.5315	-0.00071332	1.4551	0.00067775	-0.076382	-3.5577E-05	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.76255	1	7883	7883		35.618	3.6634	1	991370	+		29931	25739	20034	20044	34031	34031					0.07307411740180214
LLGARSRAS	9	Unmodified	_LLGARSRAS_					0	0	0			REV__ENST00000372906.2_1_20:43104570-43108633:+|nuORF	REV__ENST00000372906.2_1_20:43104570-43108633:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7777404785156	2	465.777608	929.540663	-0.22002	-0.00010248	0.31699	0.00014765	0.096969	4.5166E-05	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.77244	1	9565	9565		32.812	2.3088	1	1042300	+		29932	25739	20034	20044	34032	34032					0.07307411740180214
LLGASLLF	8	Unmodified	_LLGASLLF_					0	0	0			REV__nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3	REV__nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2566223144531	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.86791	1	596	596		28.254	1.4582	1	679020	+		29933	19543	20035	20045	34033	34033					0.08288775879532295
LLGASVLLP	9	Unmodified	_LLGASVLLP_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7875671386719	2	441.786579	881.558604	-1.4973	-0.00066148	4.3629	0.0019275	2.8656	0.001266	441.788391738542	44.7	2.6432	44.712	43.395	46.038	0.012058					134	65	3	0	0	0	0.7932	1	3218	3218		26.796	0	1	555340	+		29934	21140	20036	20046	34034	34034					0.11308733942325944
LLGAVGALAVL	11	Unmodified	_LLGAVGALAVL_					0	0	0			REV__ENST00000462351.5_1_2:220160899-220172331:-|nuORF	REV__ENST00000462351.5_1_2:220160899-220172331:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.8257751464844	2	498.826235	995.637917	0.14101	7.0337E-05	-0.57634	-0.00028749	-0.43533	-0.00021716	498.8258184958068	67.735	1.3923	68.119	67.633	69.025	0.38483					74	33	3	0	0	0	0.69735	1	7380	7380		31.955	0.42505	1	716250	+		29935	16401	20037	20047	34035	34035					0.13992380896468148
LLGAVIPLS	9	Unmodified	_LLGAVIPLS_					0	0	0			REV__ENSG00000172940|ENST00000311856|SLC22A13	REV__ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78717041015625	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.7932	1	2886	2886		19.36	0	1	14534000	+		29936	21870	20038	20048	34036	34036					0.11308733942325944
LLGAVLAWPL	10	Unmodified	_LLGAVLAWPL_					0	0	0			REV__ENSG00000125657|ENST00000245817|TNFSF9	REV__ENSG00000125657|ENST00000245817|TNFSF9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.32470703125	2	526.828778	1051.643	-0.70635	-0.00037212	-3.2168	-0.0016947	-3.9232	-0.0020668	526.8269019492499	64.751	0.93229	64.789	64.392	65.325	0.037857					44	31	2	0	0	0	0.37624	1	5765	5765		12.959	0	1	143010	+		29937	18656	20039	20049	34037	34037					0.11924684759060256
LLGCTFMA	8	Unmodified	_LLGCTFMA_					0	0	0			REV__ENSG00000187715|ENST00000405109|KBTBD12	REV__ENSG00000187715|ENST00000405109|KBTBD12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.261474609375	2	428.208792	854.403032	2.6406	0.0011307	-0.46736	-0.00020013	2.1733	0.00093061	428.20794673217443	90.736	0.59274	90.783	90.432	91.025	0.046448					22	14	2	0	0	0	0.4196	1	9366	9366		37.028	0	1	76136	+		29938	22937	20040	20050	34038	34038					-0.029993761751029524
LLGDIVLVS	9	Unmodified	_LLGDIVLVS_					0	0	0			REV__ENSG00000215644|ENST00000400723|GCGR	REV__ENSG00000215644|ENST00000400723|GCGR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.7909240722656	2	464.789318	927.564084	-0.072724	-3.3801E-05	3.0915	0.0014369	3.0188	0.0014031	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.7932	1	2197	2197		25.45	1.2474	1	297050	+		29939	23689	20041	20051	34039	34039					0.09740412734129222
LLGDLEEL	8	Unmodified	_LLGDLEEL_					0	0	0		ENST00000465315.1_1_2:131099551-131099698:-|nuORF;ENSG00000136710|ENST00000259229|CCDC115	ENST00000465315.1_1_2:131099551-131099698:-|nuORF	ENST00000465315.1_1_2:131099551-131099698:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2500305175781	2	451.247483	900.480414	-0.10221	-4.6121E-05	2.7821	0.0012554	2.6799	0.0012093	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.89457	1	6453	6453		37.028	0	1	178200			29940	4129	20042	20052	34040	34040					0.026192565664246104
LLGDPPPV	8	Unmodified	_LLGDPPPV_					0	0	0			REV__ENST00000467303.5_1_3:197431537-197476242:-|nuORF	REV__ENST00000467303.5_1_3:197431537-197476242:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.23095703125	2	404.234179	806.453805	-0.18723	-7.5686E-05	-2.7376	-0.0011067	-2.9249	-0.0011823	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.82464	1	8413	8413		21.702	0	1	4185000	+		29941	27154	20043	20053	34041	34041					0.04283612465758324
LLGDVATLPL	10	Unmodified	_LLGDVATLPL_					0	0	0		nc|ENSG00000123191|P35670-3|ATP7B;nc|ENSG00000123191|P35670-4|ATP7B;ENSG00000123191|ENST00000242839|ATP7B;nc|ENSG00000123191|P35670-2|ATP7B	nc|ENSG00000123191|P35670-3|ATP7B	nc|ENSG00000123191|P35670-3|ATP7B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.30908203125	2	506.307875	1010.6012	-1.6116	-0.00081596	4.0929	0.0020723	2.4813	0.0012563	506.3098944096933	39.424	1.5109	39.424	38.73	40.241	0					81	36	3	0	0	0	0.85934	1	2513	2513		35.618	6.4687	1	128650			29942	3264	20044	20054	34042	34042					0.09632084279917308
LLGDVGLLL	9	Unmodified	_LLGDVGLLL_					0	0	0			REV__ENSG00000274386|ENST00000637012|TMEM269	REV__ENSG00000274386|ENST00000637012|TMEM269	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7918701171875	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.67235	1	2921	2921		42.474	5.3154	1	759950	+		29943	24001	20045	20055	34043	34043					0.10984716596760791
LLGDVGLLL	9	Unmodified	_LLGDVGLLL_					0	0	0			REV__ENSG00000274386|ENST00000637012|TMEM269	REV__ENSG00000274386|ENST00000637012|TMEM269	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7924499511719	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.76996	1	4026	4026		33.516	1.5607	1	186860	+		29944	24001	20045	20055	34044	34044					0.10984716596760791
LLGDVGLLL	9	Unmodified	_LLGDVGLLL_					0	0	0			REV__ENSG00000274386|ENST00000637012|TMEM269	REV__ENSG00000274386|ENST00000637012|TMEM269	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79132080078125	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.78851	1	3647	3647		28.254	2.8041	1	662040	+		29945	24001	20045	20055	34045	34045					0.10984716596760791
LLGDVGLLL	9	Unmodified	_LLGDVGLLL_					0	0	0			REV__ENSG00000274386|ENST00000637012|TMEM269	REV__ENSG00000274386|ENST00000637012|TMEM269	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7921142578125	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.7932	1	2854	2854		26.796	0	1	548640	+		29946	24001	20045	20055	34046	34046					0.10984716596760791
LLGDVGLLL	9	Unmodified	_LLGDVGLLL_					0	0	0			REV__ENSG00000274386|ENST00000637012|TMEM269	REV__ENSG00000274386|ENST00000637012|TMEM269	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7931213378906	2	456.791861	911.569169	0.17991	8.2183E-05	2.7362	0.0012499	2.9161	0.001332	456.7930101461281	36.153	2.2506	36.256	35.136	37.386	0.10306					210	68	4	0	0	0	0.7932	1	1939	1939		25.45	0	1	3531000	+		29947	24001	20045	20055	34047	34047					0.10984716596760791
LLGDVGLLL	9	Unmodified	_LLGDVGLLL_					0	0	0			REV__ENSG00000274386|ENST00000637012|TMEM269	REV__ENSG00000274386|ENST00000637012|TMEM269	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79144287109375	2	456.791861	911.569169	-0.22016	-0.00010057	2.6195	0.0011965	2.3993	0.001096	456.79291197659967	44.777	1.8237	44.709	43.946	45.77	-0.068634					85	44	3	0	0	0	0.7932	1	3310	3310		19.36	1.0356	1	224230	+		29948	24001	20045	20055	34048	34048					0.10984716596760791
LLGEIDLE	8	Unmodified	_LLGEIDLE_					0	0	0		ENST00000523511.1_1_8:38021190-38029494:-|nuORF;ENSG00000175324|ENST00000311351|LSM1	ENST00000523511.1_1_8:38021190-38029494:-|nuORF	ENST00000523511.1_1_8:38021190-38029494:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.2456359863281	2	451.247483	900.480414	-1.2821	-0.00057856	4.0972	0.0018488	2.815	0.0012703	451.2491871267672	67.547	1.2746	67.683	67.257	68.531	0.13522					88	48	2	0	0	0	0.89457	1	6069	6069		37.028	0	1	186190			29949	7008	20046	20056	34049	34049					0.02619256566435979
LLGEIRSPSAQ	11	Unmodified	_LLGEIRSPSAQ_					0	0	0		ENSG00000189139|ENST00000340446|FSCB	ENSG00000189139|ENST00000340446|FSCB	ENSG00000189139|ENST00000340446|FSCB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	585.8325805664062	2	585.827495	1169.64044	0.69219	0.00040551	3.9738	0.002328	4.666	0.0027335	585.8297459988387	57.724	1.3091	57.804	57.326	58.635	0.079643					103	61	2	0	0	0	0.68532	1	4875	4875		33.922	7.8582	1	163030			29950	7993	20047	20057	34050	34050					0.062401845634894926
LLGEKELPL	9	Unmodified	_LLGEKELPL_					0	0	0		ENSG00000183186|ENST00000332235|C2CD4C	ENSG00000183186|ENST00000332235|C2CD4C	ENSG00000183186|ENST00000332235|C2CD4C	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.30810546875	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.988	1	44.983	44.483	45.483	-0.0041618								0	0	0	0.28772	1	3551	3551		35.618	1.4457	1				29951	7507	20048	20058	34051	34051					0.09632084279917308
LLGEKELPL	9	Unmodified	_LLGEKELPL_					0	0	0		ENSG00000183186|ENST00000332235|C2CD4C	ENSG00000183186|ENST00000332235|C2CD4C	ENSG00000183186|ENST00000332235|C2CD4C	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3006591796875	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.968	1	53.015	52.515	53.515	0.046654								0	0	0	0.30778	1	4304	4304		27.882	0	1				29952	7507	20048	20058	34052	34052					0.09632084279917308
LLGELALVV	9	Unmodified	_LLGELALVV_					0	0	0		ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8007507324219	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.78058	1	3141	3141		30.504	6.3009	1	942760			29953	4067	20049	20059	34053	34053					0.11905003113804469
LLGELDLPL	9	Unmodified	_LLGELDLPL_					0	0	0			REV__ENST00000449570.6_1_3:9798246-9807816:+|nuORF	REV__ENST00000449570.6_1_3:9798246-9807816:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2962646484375	2	491.794601	981.574648	-0.72436	-0.00035624	2.2939	0.0011281	1.5695	0.00077188	491.79558867203156	43.471	1.2464	43.477	42.933	44.179	0.0057487					50	30	2	0	0	0	0.7932	1	2959	2959		23.042	1.0826	1	198180	+		29954	26854	20050	20060	34054	34054					0.08312395388577443
LLGERGDVK	9	Unmodified	_LLGERGDVK_					0	0	0			REV__ENST00000564508.2_1_16:72461754-72462081:+|nuORF	REV__ENST00000564508.2_1_16:72461754-72462081:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.7844543457031	2	493.785099	985.555644	0.18108	8.9416E-05	-0.48696	-0.00024045	-0.30587	-0.00015104	493.78506022850127	18.658	0.32773	18.181	17.983	18.311	-0.47694					9	6	2	0	0	0	0.64922	1	417	417		44.117	1.7207	1	60292	+		29955	28838	20051	20061	34055	34055					0.06228858817530636
LLGERGDVK	9	Unmodified	_LLGERGDVK_					0	0	0			REV__ENST00000564508.2_1_16:72461754-72462081:+|nuORF	REV__ENST00000564508.2_1_16:72461754-72462081:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	493.785099	985.555644	0.18108	8.9416E-05	-0.48696	-0.00024045	-0.30587	-0.00015104	493.78506022850127	18.658	0.32773	18.181	17.983	18.311	-0.47694	-0.014413	-0.00021819	NaN	44.117	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60292	+		29956	28838	20051	20061							0.06228858817530636
LLGERGDVK	9	Unmodified	_LLGERGDVK_					0	0	0			REV__ENST00000564508.2_1_16:72461754-72462081:+|nuORF	REV__ENST00000564508.2_1_16:72461754-72462081:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	493.785099	985.555644	-0.015829	-7.8162E-06	-0.14661	-7.2395E-05	-0.16244	-8.0211E-05	493.78485178558	18.839	0.38292	18.21	18.018	18.401	-0.6296	0.014413	0.00011793	NaN	44.117	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85433	+		29957	28838	20051	20061							0.06228858817530636
LLGERGVGP	9	Unmodified	_LLGERGVGP_					0	0	0			REV__ENSG00000169297|ENST00000378970|NR0B1	REV__ENSG00000169297|ENST00000378970|NR0B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2606506347656	2	449.261259	896.507966	-1.6904	-0.00075944	0.29835	0.00013403	-1.3921	-0.0006254	449.2612435598619	72.23	1.3235	72.615	72.251	73.575	0.38582					73	31	3	0	0	0	0.62081	1	8081	8081		45.952	0	1	1206100	+		29958	21568	20052	20062	34056	34056					0.05557204617343814
LLGERGVGP	9	Unmodified	_LLGERGVGP_					0	0	0			REV__ENSG00000169297|ENST00000378970|NR0B1	REV__ENSG00000169297|ENST00000378970|NR0B1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	449.261259	896.507966	-1.3981	-0.00062809	-1.9965	-0.00089693	-3.3945	-0.001525	449.26016337091954	73.16	0.56598	73.16	72.914	73.48	0	0.38555	-0.00098424	NaN	45.952	28	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77363	+		29959	21568	20052	20062							0.05557204617343814
LLGFPPKKSGR	11	Unmodified	_LLGFPPKKSGR_					0	0	0			REV__chr11:68900605-68903252|17|21.18|0.67|4.98|-|0|MRPL21,None|1	REV__chr11:68900605-68903252|17|21.18|0.67|4.98|-|0|MRPL21,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.91485595703125	3	400.580152	1198.71863	3.1807	0.0012741	-2.2259	-0.00089164	0.9548	0.00038247	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.75121	1	12590	12590		21.78	2.5177	1	88404	+		29960	15505	20053	20063	34057	34057					0.1272166193934936
LLGFVVTAFF	10	Unmodified	_LLGFVVTAFF_					0	0	0			REV__nc|ENSG00000101290|O95674-2|CDS2	REV__nc|ENSG00000101290|O95674-2|CDS2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.3064575195312	2	557.320786	1112.62702	0.16012	8.9236E-05	2.5139	0.001401	2.674	0.0014903	557.3220364322606	27.912	0.56432	27.873	27.553	28.117	-0.038525					24	12	3	0	0	0	0.37624	1	1352	1352		19.36	1.995	1	42913	+		29961	17262	20054	20064	34058	34058					0.07520978522165933
LLGGALMVPR	10	Unmodified	_LLGGALMVPR_					0	0	0			REV__ENSG00000100156|ENST00000681075|SLC16A8	REV__ENSG00000100156|ENST00000681075|SLC16A8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8087768554688	2	513.810062	1025.60557	-0.43911	-0.00022562	-1.7271	-0.0008874	-2.1662	-0.001113	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.86452	1	4296	4296		30.504	1.3541	1	1606900	+		29962	17145	20055	20065	34059	34059					0.09379270221802471
LLGGALMVPR	10	Unmodified	_LLGGALMVPR_					0	0	0			REV__ENSG00000100156|ENST00000681075|SLC16A8	REV__ENSG00000100156|ENST00000681075|SLC16A8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.809814453125	2	513.810062	1025.60557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.021	1	57.991	57.491	58.491	-0.029865								0	0	0	0.45132	1	5377	5377		29.15	4.9468	1		+		29963	17145	20055	20065	34060	34060					0.09379270221802471
LLGGALMVPR	10	Unmodified	_LLGGALMVPR_					0	0	0			REV__ENSG00000100156|ENST00000681075|SLC16A8	REV__ENSG00000100156|ENST00000681075|SLC16A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.80908203125	2	513.810062	1025.60557	0.36713	0.00018864	-2.2716	-0.0011671	-1.9044	-0.00097851	513.8088609518841	50.93	1.0953	50.98	50.541	51.637	0.049896					79	32	3	0	0	0	0.86305	1	4031	4031		31.955	5.1588	1	394250	+		29964	17145	20055	20065	34061	34061					0.09379270221802471
LLGGGAVRGRG	11	Unmodified	_LLGGGAVRGRG_					0	0	0		ENST00000309050.9_2_12:110480181-110496907:-|nuORF	ENST00000309050.9_2_12:110480181-110496907:-|nuORF	ENST00000309050.9_2_12:110480181-110496907:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.9734191894531	2	506.804157	1011.59376	-1.5928	-0.00080725	0.44213	0.00022407	-1.1507	-0.00058318	506.803021257873	113.32	0.43858	113.27	113.09	113.53	-0.044777					14	10	2	0	0	0	0.1753	1	12114	12114		35.618	11.416	1	221400			29965	9896	20056	20066	34062	34062					0.08842789522861949
LLGGGGAVAAA	11	Unmodified	_LLGGGGAVAAA_					0	0	0			REV__ENSG00000215474|ENST00000425639|SKOR2	REV__ENSG00000215474|ENST00000425639|SKOR2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.26165771484375	2	428.747985	855.481417	1.4303	0.00061323	1.2951	0.00055525	2.7253	0.0011685	428.748725193987	91.044	0.23682	90.977	90.879	91.116	-0.067085					9	5	2	0	0	0	0.17277	1	9556	9556		17.365	0.89182	1	282920	+		29966	23686	20057	20067	34063	34063					0.047895157259858934
LLGGGGLIIV	10	Unmodified	_LLGGGGLIIV_					0	0	0			REV__ENSG00000102967|ENST00000219240|DHODH	REV__ENSG00000102967|ENST00000219240|DHODH	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7904052734375	2	456.299853	910.585153	-1.2392	-0.00056545	3.8454	0.0017547	2.6062	0.0011892	456.3014948011369	49.504	1.4145	49.529	48.8	50.214	0.025578					54	35	2	0	0	0	0.37624	1	3849	3849		26.796	2.2921	1	127180	+		29967	17375	20058	20068	34064	34064					0.1262842283366581
LLGGGGLIIV	10	Unmodified	_LLGGGGLIIV_					0	0	0			REV__ENSG00000102967|ENST00000219240|DHODH	REV__ENSG00000102967|ENST00000219240|DHODH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.3008728027344	2	456.299853	910.585153	0.82269	0.00037539	2.1236	0.000969	2.9463	0.0013444	456.30067401982916	32.79	1.601	33.001	32.465	34.066	0.21168					118	37	4	0	0	0	0.85976	1	2373	2373		35.201	7.3185	1	2892400	+		29968	17375	20058	20068	34065	34065					0.1262842283366581
LLGGGPYMLC	10	Unmodified	_LLGGGPYMLC_					0	0	0		ENSG00000103067|ENST00000473183|ESRP2;nc|ENSG00000103067|Q9H6T0|ESRP2;ENST00000562567.6_1_16:68267161-68268061:-|nuORF;ENST00000563159.5_1_16:68267455-68268061:-|nuORF;ENST00000564465.1_1_16:68267455-68269590:-|nuORF;ENST00000569964.5_1_16:68267161-68269644:-|nuORF;ENST00000251366.7_1_16:68266662-68269948:-|nuORF	ENSG00000103067|ENST00000473183|ESRP2	ENSG00000103067|ENST00000473183|ESRP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.757080078125	2	512.253731	1022.49291	0.39694	0.00020333	-0.13756	-7.0465E-05	0.25938	0.00013287	512.2534945513374	54.386	1.4462	54.467	54.003	55.449	0.081524					65	38	3	0	0	0	0.85976	1	4456	4456		35.201	1.6851	1	633090			29969	2053	20059	20069	34066	34066					-0.017437465665352647
LLGGILADE	9	Unmodified	_LLGGILADE_					0	0	0		nc|ENSG00000146414|Q149N8-5|SHPRH;nc|ENSG00000146414|Q149N8-2|SHPRH;nc|ENSG00000146414|Q149N8-4|SHPRH;ENSG00000146414|ENST00000275233|SHPRH	nc|ENSG00000146414|Q149N8-5|SHPRH	nc|ENSG00000146414|Q149N8-5|SHPRH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7541809082031	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.78058	1	8015	8015		30.504	1.3541	1	394230			29970	4844	20060	20070	34067	34067					0.0426296280331826
LLGGLALLAA	10	Unmodified	_LLGGLALLAA_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1;nc|ENSG00000077942|P23142-2|FBLN1;nc|ENSG00000077942|P23142-3|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3016052246094	2	456.299853	910.585153	-0.28505	-0.00013007	2.6178	0.0011945	2.3328	0.0010645	456.3009409160632	46.468	1.3803	46.389	45.933	47.313	-0.079002					82	40	3	0	0	0	0.85108	1	3442	3442		19.36	0	1	401880			29971	14782	20061	20071	34068	34068					0.1262842283365444
LLGGLIKV	8	Unmodified	_LLGGLIKV_					0	0	0		ENST00000317122.2_1_1:16160974-16161130:-|nuORF	ENST00000317122.2_1_1:16160974-16161130:-|nuORF	ENST00000317122.2_1_1:16160974-16161130:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7850646972656	2	406.783839	811.553125	1.2307	0.00050062	2.609	0.0010613	3.8397	0.0015619	406.7847800610387	35.56	4.0123	35.569	35.212	39.224	0.0092812					187	90	4	0	0	0	0.91005	1	2282	2282		42.474	7.2737	1	403450			29972	9989	20062	20072	34069	34069					0.13981055150509292
LLGGLIKV	8	Unmodified	_LLGGLIKV_					0	0	0		ENST00000317122.2_1_1:16160974-16161130:-|nuORF	ENST00000317122.2_1_1:16160974-16161130:-|nuORF	ENST00000317122.2_1_1:16160974-16161130:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852478027344	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.87	1	31.981	31.481	32.481	0.11117								0	0	0	0.29694	1	1478	1478		37.028	8.7742	1				29973	9989	20062	20072	34070	34070					0.13981055150509292
LLGGLIKV	8	Unmodified	_LLGGLIKV_					0	0	0		ENST00000317122.2_1_1:16160974-16161130:-|nuORF	ENST00000317122.2_1_1:16160974-16161130:-|nuORF	ENST00000317122.2_1_1:16160974-16161130:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78509521484375	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.82464	1	1514	1514		21.702	6.0661	1	1817700			29974	9989	20062	20072	34071	34071					0.13981055150509292
LLGGLIYGHL	10	Unmodified	_LLGGLIYGHL_					0	0	0		nc|ENSG00000197658|Q8N4F4-1|SLC22A24;nc|ENSG00000197658|Q8N4F4-3|SLC22A24;ENSG00000197658|ENST00000612278|SLC22A24	nc|ENSG00000197658|Q8N4F4-1|SLC22A24	nc|ENSG00000197658|Q8N4F4-1|SLC22A24	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.3135986328125	2	528.316035	1054.61752	-0.63246	-0.00033414	-2.9689	-0.0015685	-3.6013	-0.0019026	528.3145655024048	98.746	1.1121	98.746	98.15	99.262	0					55	27	3	0	0	0	0.85976	1	9930	9930		35.201	3.2459	1	337340			29975	8188	20063	20073	34072	34072					0.09239210236660256
LLGGLLIGFYV	11	Unmodified	_LLGGLLIGFYV_					0	0	0		ENST00000528658.1_1_8:70673979-70744908:-|nuORF;ENST00000532388.5_1_8:70617264-70744908:-|nuORF;nc|ENSG00000137571|Q9H2Y9-3|SLCO5A1;nc|ENSG00000137571|Q9H2Y9-2|SLCO5A1;ENSG00000137571|ENST00000260126|SLCO5A1	ENST00000528658.1_1_8:70673979-70744908:-|nuORF	ENST00000528658.1_1_8:70673979-70744908:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8593139648438	2	582.854993	1163.69543	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.2	1	115.23	114.73	115.73	0.026466								0	0	0	0.56276	1	12631	12631		24.203	0.68005	1				29976	4213	20064	20074	34073	34073					0.12013223102030679
LLGGLQRRLIA	11	Unmodified	_LLGGLQRRLIA_					0	0	0		ENST00000382985.8_1_14:21464725-21465046:+|nuORF	ENST00000382985.8_1_14:21464725-21465046:+|nuORF	ENST00000382985.8_1_14:21464725-21465046:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.9299621582031	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.78683	1	3691	3691		14.086	1.6532	1	2526100			29977	10980	20065	20075	34074	34074					0.1756903972204782
LLGGLQRRLIA	11	Unmodified	_LLGGLQRRLIA_					0	0	0		ENST00000382985.8_1_14:21464725-21465046:+|nuORF	ENST00000382985.8_1_14:21464725-21465046:+|nuORF	ENST00000382985.8_1_14:21464725-21465046:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.93035888671875	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.75906	1	3985	3985		20.03	0.7678	1	2612300			29978	10980	20065	20075	34075	34075					0.1756903972204782
LLGGLQRRLIA	11	Unmodified	_LLGGLQRRLIA_					0	0	0		ENST00000382985.8_1_14:21464725-21465046:+|nuORF	ENST00000382985.8_1_14:21464725-21465046:+|nuORF	ENST00000382985.8_1_14:21464725-21465046:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.92962646484375	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.935	1	46.847	46.347	47.347	-0.087646								0	0	0	0.56276	1	3477	3477		9.6461	0	1				29979	10980	20065	20075	34076	34076					0.1756903972204782
LLGGMRKG	8	Unmodified	_LLGGMRKG_					0	0	0			REV__ENSG00000115665|ENST00000264047|SLC5A7	REV__ENSG00000115665|ENST00000264047|SLC5A7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.5148010253906	2	416.247098	830.479642	-0.35457	-0.00014759	-2.09	-0.00086996	-2.4446	-0.0010175	416.24603586431266	54.394	0.7934	54.979	54.543	55.337	0.58474					30	18	2	0	0	0	0.4196	1	5514	5514		28.254	0	1	93834	+		29980	18141	20066	20076	34077	34077					0.05762183436399937
LLGGPLGGK	9	Unmodified	_LLGGPLGGK_					0	0	0		ENSG00000119638|ENST00000238616|NEK9;ENST00000556170.5_1_14:75553702-75572727:-|nuORF;ENST00000557026.5_1_14:75551269-75572727:-|nuORF	ENSG00000119638|ENST00000238616|NEK9	ENSG00000119638|ENST00000238616|NEK9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.9121398925781	2	406.255446	810.496338	0.016681	6.7768E-06	3.8721	0.0015731	3.8888	0.0015798	406.2569493805284	37.668	1.004	38.154	37.87	38.874	0.48581					45	25	2	0	0	0	0.20789	1	3020	3020		24.203	3.7209	1	824470			29981	3081	20067	20077	34078	34078					0.08351007594001203
LLGGPPAPRP	10	Unmodified	_LLGGPPAPRP_					0	0	0		ENSG00000205502|ENST00000380392|C2CD4B;ENSG00000198535|ENST00000355522|C2CD4A	ENSG00000205502|ENST00000380392|C2CD4B	ENSG00000205502|ENST00000380392|C2CD4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7912902832031	2	487.792727	973.5709	-0.71211	-0.00034736	-3.8761	-0.0018908	-4.5883	-0.0022381	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.81018	1	7724	7724		38.806	0	1	678280			29982	8282	20068	20078	34079	34079					0.08305770405377189
LLGHAKKLM	9	Oxidation (M)	_LLGHAKKLM(Oxidation (M))_		LLGHAKKLM(1)		LLGHAKKLM(41)	0	0	1			REV__nc|ENSG00000137497|Q14980-4|NUMA1	REV__nc|ENSG00000137497|Q14980-4|NUMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8093872070312	2	513.810062	1025.60557	-0.12671	-6.5103E-05	-1.9623	-0.0010083	-2.089	-0.0010734	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.69914	1	3966	3966		40.573	12.318	1	1731500	+		29983	19387	20069	20079	34080	34080		287			0.09379270221825209
LLGHKTVF	8	Unmodified	_LLGHKTVF_					0	0	0		ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF	ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7801208496094	2	457.776545	913.538538	-1.9558	-0.00089533	-1.6821	-0.00077001	-3.6379	-0.0016653	457.77454436297745	42.921	0.40584	43.619	43.463	43.869	0.69754					12	9	2	0	0	0	0.4196	1	3849	3849		35.201	29.28	1	76102			29984	4219	20070	20080	34081	34081					0.07830983002372705
LLGHRASQ	8	Unmodified	_LLGHRASQ_					0	0	0		ENST00000602216.1_1_19:17970765-17972392:+|nuORF	ENST00000602216.1_1_19:17970765-17972392:+|nuORF	ENST00000602216.1_1_19:17970765-17972392:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9391784667969	2	441.251226	880.487899	0.32732	0.00014443	-3.4333	-0.001515	-3.106	-0.0013705	441.24956900989076	54.81	0.78512	54.901	54.44	55.225	0.091167					32	21	2	0	0	0	0.4196	1	4576	4576		31.955	12.595	1	129260			29985	14400	20071	20081	34082	34082					0.04287453677375197
LLGHWAVYA	9	Unmodified	_LLGHWAVYA_					0	0	0		nc|ENSG00000158796|O75618-2|DEDD	nc|ENSG00000158796|O75618-2|DEDD	nc|ENSG00000158796|O75618-2|DEDD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8141479492188	2	515.279452	1028.54435	2.6239	0.001352	3.8278	0.0019724	6.4517	0.0033244	515.7840620989235	25.315	0.35067	24.883	24.717	25.068	-0.4311					13	7	2	0	0	0	0.20789	1	1312	1312		29.842	13.368	1	80769			29986	15029	20072	20082	34083	34083					0.03122081514038655
LLGIAAAVLA	10	Unmodified	_LLGIAAAVLA_					0	0	0		ENSG00000188051|ENST00000341130|TMEM221	ENSG00000188051|ENST00000341130|TMEM221	ENSG00000188051|ENST00000341130|TMEM221	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3013610839844	2	456.299853	910.585153	-0.34519	-0.00015751	3.1038	0.0014163	2.7586	0.0012588	456.30112978669194	48.146	1.4143	48.053	47.615	49.029	-0.093178					75	35	3	0	0	0	0.85976	1	3670	3670		35.201	1.6851	1	317120			29987	7901	20073	20083	34084	34084					0.12628422833643071
LLGIETPL	8	Unmodified	_LLGIETPL_					0	0	0		ENSG00000090339|ENST00000264832|ICAM1	ENSG00000090339|ENST00000264832|ICAM1	ENSG00000090339|ENST00000264832|ICAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2611999511719	2	428.262936	854.51132	-0.17868	-7.6523E-05	-2.7106	-0.0011609	-2.8893	-0.0012374	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.89457	1	9387	9387		37.028	1.8278	1	52688000			29988	1641	20074	20084	34085	34085					0.0782445467133357
LLGIETPL	8	Unmodified	_LLGIETPL_					0	0	0		ENSG00000090339|ENST00000264832|ICAM1	ENSG00000090339|ENST00000264832|ICAM1	ENSG00000090339|ENST00000264832|ICAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.2615661621094	2	428.262936	854.51132	0.64464	0.00027608	-3.646	-0.0015614	-3.0014	-0.0012854	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.86791	1	9211	9211		28.254	0.37203	1	40631000			29989	1641	20074	20084	34086	34086					0.0782445467133357
LLGIFFVIP	9	Unmodified	_LLGIFFVIP_					0	0	0			REV__nc|ENSG00000100731|Q96RV3-4|PCNX1	REV__nc|ENSG00000100731|Q96RV3-4|PCNX1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.6331787109375	2	509.820421	1017.62629	0.41322	0.00021067	2.2288	0.0011363	2.642	0.001347	509.82151656605356	103.85	0.71387	103.89	103.63	104.34	0.041481					24	16	2	0	0	0	0.20789	1	11314	11314		14.664	5.8418	1	95759	+		29990	17217	20075	20085	34087	34087					0.11818183873128874
LLGIFKRGG	9	Unmodified	_LLGIFKRGG_					0	0	0		MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|51|2|anti-sense	MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|51|2|anti-sense	MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|51|2|anti-sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8009338378906	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.7932	2	9542	9542;9591		26.796	2.2921	1	7439400			29991	14707	20076	20086	34088;34089	34088					0.11022360785045748
LLGIFKRGG	9	Unmodified	_LLGIFKRGG_					0	0	0		MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|51|2|anti-sense	MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|51|2|anti-sense	MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|51|2|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.80072021484375	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.7932	4	9698	9698;9710;9746;9771		26.796	2.2921	1	17379000			29992	14707	20076	20086	34090;34091;34092;34093	34090					0.11022360785045748
LLGIKRLRRLY	11	Unmodified	_LLGIKRLRRLY_					0	0	0		nc|ENSG00000075388|P08620-2|FGF4;ENSG00000075388|ENST00000168712|FGF4	nc|ENSG00000075388|P08620-2|FGF4	nc|ENSG00000075388|P08620-2|FGF4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.62359619140625	3	467.645267	1399.91397	0.77101	0.00036056	-4.3121	-0.0020165	-3.5411	-0.001656	467.64297997688107	107.61	0.21076	107.7	107.59	107.8	0.091255					5	4	2	0	0	0	0.17606	1	11566	11566		25.126	4.811	1	118640			29993	1332	20077	20087	34094	34094					0.23001252464223398
LLGIKTDI	8	Unmodified	_LLGIKTDI_					0	0	0		ENSG00000178826|ENST00000359333|TMEM139	ENSG00000178826|ENST00000359333|TMEM139	ENSG00000178826|ENST00000359333|TMEM139	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7747802734375	2	436.776211	871.537869	-1.136	-0.00049617	-1.8731	-0.00081814	-3.0091	-0.0013143	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.884	1	8874	8874		33.516	1.5607	1	8774400			29994	7227	20078	20088	34095	34095					0.09696143562666748
LLGIKTDI	8	Unmodified	_LLGIKTDI_					0	0	0		ENSG00000178826|ENST00000359333|TMEM139	ENSG00000178826|ENST00000359333|TMEM139	ENSG00000178826|ENST00000359333|TMEM139	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.7748107910156	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.91005	1	9077	9077		42.474	1.9018	1	13819000			29995	7227	20078	20088	34096	34096					0.09696143562666748
LLGIKTDI	8	Unmodified	_LLGIKTDI_					0	0	0		ENSG00000178826|ENST00000359333|TMEM139	ENSG00000178826|ENST00000359333|TMEM139	ENSG00000178826|ENST00000359333|TMEM139	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.774658203125	2	436.776211	871.537869	-0.99178	-0.00043318	-2.1014	-0.00091785	-3.0932	-0.001351	436.7752083239027	90.559	2.3196	91.029	90.562	92.882	0.47068					153	55	5	0	0	0	0.884	1	10721	10721		33.516	1.5607	1	11924000			29996	7227	20078	20088	34097	34097					0.09696143562666748
LLGILAVVD	9	Unmodified	_LLGILAVVD_					0	0	0		ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7919921875	2	456.791861	911.569169	0.05486	2.506E-05	2.6152	0.0011946	2.6701	0.0012197	456.79295826454774	49.784	2.1713	49.788	48.709	50.88	0.0035973					85	53	2	0	0	0	0.7932	1	4147	4147		26.796	2.5934	1	208660			29997	7359	20079	20089	34098	34098					0.10984716596749422
LLGILLGTLW	10	Unmodified	_LLGILLGTLW_					0	0	0		nc|ENSG00000253159|O60330-2|PCDHGA12;ENSG00000253159|ENST00000252085|PCDHGA12	nc|ENSG00000253159|O60330-2|PCDHGA12	nc|ENSG00000253159|O60330-2|PCDHGA12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3385620117188	2	549.84971	1097.68487	0.092459	5.0839E-05	2.9928	0.0016456	3.0852	0.0016964	550.352430172599	16.852	0.19392	16.897	16.826	17.02	0.0457					10	8	2	0	0	0	0.37624	1	200	200		23.042	0	1	38419			29998	8854	20080	20090	34099	34099					0.13993240447621247
LLGILVGPT	9	Unmodified	_LLGILVGPT_					0	0	0		ENST00000290551.4_1_1:203277738-203278125:+|nuORF	ENST00000290551.4_1_1:203277738-203278125:+|nuORF	ENST00000290551.4_1_1:203277738-203278125:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7880859375	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.49378	3	2898	2715;2898;2922		52.299	7.7681	1	11085000			29999	9673	20081	20091	34100;34101;34102	34101					0.11308733942325944
LLGILVGPT	9	Unmodified	_LLGILVGPT_					0	0	0		ENST00000290551.4_1_1:203277738-203278125:+|nuORF	ENST00000290551.4_1_1:203277738-203278125:+|nuORF	ENST00000290551.4_1_1:203277738-203278125:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7889404296875	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	1	2554	2554		26.796	6.3143	1	11532000			30000	9673	20081	20091	34103	34103					0.11308733942325944
LLGILWATAHL	11	Unmodified	_LLGILWATAHL_					0	0	0		nc|ENSG00000188467|Q71RS6-2|SLC24A5;ENSG00000188467|ENST00000341459|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3663330078125	2	604.363516	1206.71248	3.2045	0.0019367	1.6316	0.00098609	4.8361	0.0029228	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.69931	3	11558	11558;11570;11582		27.882	17.017	1	63446000			30001	7930	20082	20092	34104;34105;34106	34104					0.11739143707836774
LLGILWATAHL	11	Unmodified	_LLGILWATAHL_					0	0	0		nc|ENSG00000188467|Q71RS6-2|SLC24A5;ENSG00000188467|ENST00000341459|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3662719726562	2	604.363516	1206.71248	3.2041	0.0019365	1.2264	0.00074118	4.4305	0.0026776	604.3643423116607	107.9	0.57175	107.87	107.34	107.92	-0.031487					38	13	5	0	0	0	0.71207	1	11946	11946		26.693	4.733	1	10754000			30002	7930	20082	20092	34107	34107					0.11739143707836774
LLGILWATAHL	11	Unmodified	_LLGILWATAHL_					0	0	0		nc|ENSG00000188467|Q71RS6-2|SLC24A5;ENSG00000188467|ENST00000341459|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3661499023438	2	604.363516	1206.71248	1.0484	0.00063359	3.8594	0.0023325	4.9078	0.0029661	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.69931	6	11118	11070;11118;11154;11179;11242;11290		35.618	6.3181	1	105850000			30003	7930	20082	20092	34108;34109;34110;34111;34112;34113	34109					0.11739143707836774
LLGILWATAHL	11	Unmodified	_LLGILWATAHL_					0	0	0		nc|ENSG00000188467|Q71RS6-2|SLC24A5;ENSG00000188467|ENST00000341459|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3663330078125	2	604.363516	1206.71248	0.90474	0.00054679	3.9121	0.0023643	4.8168	0.0029111	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.66009	7	11050	11050;11098;11110;11122;11146;11207;11268		34.173	11.695	1	105740000			30004	7930	20082	20092	34114;34115;34116;34117;34118;34119;34120	34114					0.11739143707836774
LLGILWATAHL	11	Unmodified	_LLGILWATAHL_					0	0	0		nc|ENSG00000188467|Q71RS6-2|SLC24A5;ENSG00000188467|ENST00000341459|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.36669921875	2	604.363516	1206.71248	3.6458	0.0022034	1.558	0.00094162	5.2038	0.003145	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.74022	1	12786	12786		27.882	4.3595	1	5883900			30005	7930	20082	20092	34121	34121					0.11739143707836774
LLGINNNR	8	Unmodified	_LLGINNNR_					0	0	0		nc|ENSG00000136631|Q9NRW7-2|VPS45;ENSG00000136631|ENST00000644510|VPS45;ENST00000477558.1_1_1:150049710-150054979:+|nuORF	nc|ENSG00000136631|Q9NRW7-2|VPS45	nc|ENSG00000136631|Q9NRW7-2|VPS45	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2637023925781	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.88915	1	8473	8473		35.201	6.0512	1	4511100			30006	4123	20083	20093	34122	34122					0.05435722848858404
LLGINNNR	8	Unmodified	_LLGINNNR_					0	0	0		nc|ENSG00000136631|Q9NRW7-2|VPS45;ENSG00000136631|ENST00000644510|VPS45;ENST00000477558.1_1_1:150049710-150054979:+|nuORF	nc|ENSG00000136631|Q9NRW7-2|VPS45	nc|ENSG00000136631|Q9NRW7-2|VPS45	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2623291015625	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.88915	1	7431	7431		35.201	8.4046	1	1032000			30007	4123	20083	20093	34123	34123					0.05435722848858404
LLGIPGLE	8	Unmodified	_LLGIPGLE_					0	0	0		ENSG00000279270|ENST00000624978|OR52R1;ENSG00000205409|ENST00000329322|OR52E6;ENSG00000176787|ENST00000321522|OR52E2;nc|ENSG00000181109|Q8NH57|OR52P1;nc|ENSG00000273085|Q8NGJ3|OR52E1	ENSG00000279270|ENST00000624978|OR52R1;ENSG00000176787|ENST00000321522|OR52E2;nc|ENSG00000181109|Q8NH57|OR52P1;nc|ENSG00000273085|Q8NGJ3|OR52E1	ENSG00000279270|ENST00000624978|OR52R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2479553222656	2	406.249829	810.485105	-1.9277	-0.00078311	-1.0996	-0.00044672	-3.0273	-0.0012298	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.81548	1	8892	8892		20.482	0	1	31099000			30008	9043;7098;15132;15312	20084	20094	34124	34124					0.07228185499843676
LLGIPINWGAS	11	Unmodified	_LLGIPINWGAS_					0	0	0			REV__ENST00000493011.5_1_3:133465284-133474340:+|nuORF	REV__ENST00000493011.5_1_3:133465284-133474340:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.8232421875	2	570.824224	1139.63389	-0.44856	-0.00025605	0.78362	0.00044731	0.33506	0.00019126	570.8243844075674	61.574	0.9001	61.59	61.334	62.234	0.015724					68	38	2	0	0	0	0.7144	1	5357	5357		29.17	0.020503	1	801440	+		30009	17016	20085	20095	34125	34125					0.06966291402773095
LLGISKLH	8	Unmodified	_LLGISKLH_					0	0	0			REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7874450683594	2	440.78437	879.554188	-1.696	-0.00074758	-4.3832	-0.0019321	-6.0793	-0.0026796	440.7806757461855	52.571	1.9055	52.571	51.698	53.604	0					138	52	4	0	0	0	0.85277	1	4281	4281		25.45	0	1	195220	+		30010	18859	20086	20096	34126	34126					0.10959269519412373
LLGITKNVF	9	Unmodified	_LLGITKNVF_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;nc|ENSG00000160305|Q14689-3|DIP2A;nc|ENSG00000160305|Q14689-2|DIP2A;nc|ENSG00000160305|Q14689-4|DIP2A;nc|ENSG00000160305|Q14689-5|DIP2A;ENST00000494435.5_1_21:47924311-47965916:+|nuORF;ENST00000480553.1_1_21:47959692-47966956:+|nuORF	nc|ENSG00000160305|Q14689-6|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8139343261719	2	502.810585	1003.60662	2.3403	0.0011767	3.7237	0.0018723	6.064	0.003049	502.8125095454433	97.334	3.7238	97.279	96.672	100.4	-0.055542					261	86	6	0	0	0	0.43338	2	10499	10475;10499		55.504	2.1528	1	22474000			30011	5578	20087	20097	34127;34128	34128					0.10495807862378115
LLGIVATEPL	10	Unmodified	_LLGIVATEPL_					0	0	0			REV__ENSG00000136261|ENST00000258761|BZW2	REV__ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3178100585938	2	513.3157	1024.61685	-0.35462	-0.00018203	2.3175	0.0011896	1.9629	0.0010076	513.3169096731813	53.695	2.201	53.717	52.714	54.915	0.022537					86	65	3	0	0	0	0.81018	1	4758	4758		38.806	9.6566	1	230160	+		30012	19299	20088	20098	34129	34129					0.1055237079692688
LLGIVATEPL	10	Unmodified	_LLGIVATEPL_					0	0	0			REV__ENSG00000136261|ENST00000258761|BZW2	REV__ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.316162109375	2	513.3157	1024.61685	0.40552	0.00020816	1.4026	0.00071996	1.8081	0.00092812	513.3165443291848	55.171	1.2841	55.262	54.835	56.119	0.091164					59	39	2	0	0	0	0.86452	1	4619	4619		30.504	0	1	269410	+		30013	19299	20088	20098	34130	34130					0.1055237079692688
LLGIVFMVAV	10	Unmodified	_LLGIVFMVAV_					0	0	0			REV__ENSG00000181733|ENST00000641125|OR2Z1	REV__ENSG00000181733|ENST00000641125|OR2Z1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.5165405273438	2	531.325014	1060.63547	1.4752	0.00078382	2.0405	0.0010842	3.5157	0.001868	531.3260098414142	36.395	0.62151	36.835	36.493	37.115	0.44043					24	14	2	0	0	0	0.37624	1	2890	2890		19.36	5.9059	1	202640	+		30014	22476	20089	20099	34131	34131					0.1075820916714747
LLGIVVAK	8	Unmodified	_LLGIVVAK_					0	0	0		ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08-3|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78411865234375	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.83058	2	1796	1796;1804		26.796	6.3143	1	1756100			30015	6969	20090	20100	34132;34133	34132					0.13981055150509292
LLGIVVAK	8	Unmodified	_LLGIVVAK_					0	0	0		ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08-3|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7843322753906	2	406.783839	811.553125	1.603	0.00065209	2.7018	0.001099	4.3048	0.0017511	406.7848221250031	34.952	2.3746	35.177	34.743	37.118	0.22495					109	59	3	0	0	0	0.81724	1	2589	2589		14.664	4.4793	1	1192200			30016	6969	20090	20100	34134	34134					0.13981055150509292
LLGIVVAK	8	Unmodified	_LLGIVVAK_					0	0	0		ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08-3|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.2244873046875	2	406.783839	811.553125	-0.61766	-0.00025125	4.1768	0.0016991	3.5591	0.0014478	406.7855162988557	38.369	0.48994	38.891	38.672	39.162	0.52235					18	11	2	0	0	0	0.4196	1	3159	3159		15.636	0.97212	1	126580			30017	6969	20090	20100	34135	34135					0.13981055150509292
LLGIVVAK	8	Unmodified	_LLGIVVAK_					0	0	0		ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08-3|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.783839	811.553125	-1.942	-0.00078997	6.0828	0.0024744	4.1408	0.0016844	406.7860804478409	35.591	2.4104	35.591	35.222	37.633	0	0.13255	0.0016496	NaN	14.664	130	58	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	404800			30018	6969	20090	20100							0.13981055150509292
LLGIVVAK	8	Unmodified	_LLGIVVAK_					0	0	0		ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08-3|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.783839	811.553125	-0.9011	-0.00036655	4.6741	0.0019014	3.773	0.0015348	406.7856442283775	35.638	3.7689	35.582	35.34	39.109	-0.055904	0.1236	0.00050355	NaN	14.664	162	84	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	486890			30019	6969	20090	20100							0.13981055150509292
LLGIVVAK	8	Unmodified	_LLGIVVAK_					0	0	0		ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08-3|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.783839	811.553125	-1.9101	-0.000777	5.7504	0.0023392	3.8403	0.0015622	406.78608256866437	35.516	2.7768	35.547	35.168	37.945	0.031132	0.088848	0.0013791	NaN	14.664	130	80	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	397160			30020	6969	20090	20100							0.13981055150509292
LLGKDPLL	8	Unmodified	_LLGKDPLL_					0	0	0			REV__ENSG00000119403|ENST00000373896|PHF19	REV__ENSG00000119403|ENST00000373896|PHF19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7796936035156	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.86791	1	3211	3211		28.254	0	1	1177900	+		30021	18352	20091	20101	34136	34136					0.10388447425293634
LLGKDPLL	8	Unmodified	_LLGKDPLL_					0	0	0			REV__ENSG00000119403|ENST00000373896|PHF19	REV__ENSG00000119403|ENST00000373896|PHF19	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7812194824219	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.821	1	65.207	64.707	65.707	0.38615								0	0	0	0.29452	1	7017	7017		33.516	0	1		+		30022	18352	20091	20101	34137	34137					0.10388447425293634
LLGKGLLV	8	Unmodified	_LLGKGLLV_					0	0	0		ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78533935546875	2	406.783839	811.553125	1.6742	0.00068103	2.1022	0.00085513	3.7764	0.0015362	406.78458476785784	34.278	1.4525	34.281	33.794	35.247	0.0026054					117	34	4	0	0	0	0.81548	1	2149	2149		20.482	0	1	2275400			30023	7666	20092	20102	34138	34138					0.1398105515052066
LLGKGLLV	8	Unmodified	_LLGKGLLV_					0	0	0		ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78521728515625	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.81724	2	1682	1677;1682		28.254	6.5519	1	1756100			30024	7666	20092	20102	34139;34140	34140					0.1398105515052066
LLGKGLLV	8	Unmodified	_LLGKGLLV_					0	0	0		ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7851867675781	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.052	1	33.162	32.662	33.662	0.10991								0	0	0	0.30125	1	1582	1582		20.482	4.8456	1				30025	7666	20092	20102	34141	34141					0.1398105515052066
LLGKGLLV	8	Unmodified	_LLGKGLLV_					0	0	0		ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852783203125	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.81724	1	1669	1669		14.664	0	1	1879900			30026	7666	20092	20102	34142	34142					0.1398105515052066
LLGKGLLV	8	Unmodified	_LLGKGLLV_					0	0	0		ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	ENSG00000185002|ENST00000332958|RFX6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7846984863281	2	406.783839	811.553125	1.1655	0.00047412	2.3762	0.00096659	3.5417	0.0014407	406.7846691604622	32.902	0.76672	33.072	32.59	33.356	0.16971					56	17	4	0	0	0	0.81724	1	2270	2270		14.664	0	1	1453200			30027	7666	20092	20102	34143	34143					0.1398105515052066
LLGKIAWR	8	Unmodified	_LLGKIAWR_					0	0	0		nc|ENSG00000165102|Q68CP4|HGSNAT;ENSG00000165102|ENST00000379644|HGSNAT	nc|ENSG00000165102|Q68CP4|HGSNAT	nc|ENSG00000165102|Q68CP4|HGSNAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8055725097656	2	478.805637	955.596721	0.18646	8.928E-05	0.43935	0.00021037	0.62582	0.00029964	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.85277	1	2613	2613		25.45	1.2474	1	371600			30028	6045	20093	20103	34144	34144					0.11714664647661266
LLGKIAWR	8	Unmodified	_LLGKIAWR_					0	0	0		nc|ENSG00000165102|Q68CP4|HGSNAT;ENSG00000165102|ENST00000379644|HGSNAT	nc|ENSG00000165102|Q68CP4|HGSNAT	nc|ENSG00000165102|Q68CP4|HGSNAT	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8085632324219	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.587	1	42.542	42.042	43.042	-0.045467								0	0	0	0.29353	1	2871	2871		28.254	0	1				30029	6045	20093	20103	34145	34145					0.11714664647661266
LLGKKCLVFL	10	Unmodified	_LLGKKCLVFL_					0	0	0			REV__ENSG00000138031|ENST00000679454|ADCY3	REV__ENSG00000138031|ENST00000679454|ADCY3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.6571044921875	2	567.359388	1132.70422	0.86827	0.00049262	0.92984	0.00052755	1.7981	0.0010202	567.3611762031687	110.07	0.072647	110.15	110.11	110.18	0.073685					4	2	2	0	0	0	0.37624	1	11827	11827		23.042	13.337	1	134790	+		30030	19430	20094	20104	34146	34146					0.14317873466870878
LLGKLWQPLK	10	Unmodified	_LLGKLWQPLK_					0	0	0			REV__ENSG00000117480|ENST00000243167|FAAH	REV__ENSG00000117480|ENST00000243167|FAAH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.38134765625	2	598.381709	1194.74886	-1.3038	-0.00078014	1.435	0.00085865	0.13121	7.8511E-05	598.3824993551823	42.188	1.4901	42.602	42.2	43.69	0.4139					77	36	4	0	0	0	0.86452	2	3741	3741;3755		30.504	6.3009	1	1524500	+		30031	18264	20095	20105	34147;34148	34147					0.15928020604565063
LLGKLWQPLK	10	Unmodified	_LLGKLWQPLK_					0	0	0			REV__ENSG00000117480|ENST00000243167|FAAH	REV__ENSG00000117480|ENST00000243167|FAAH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3814697265625	2	598.381709	1194.74886	-1.5819	-0.00094655	0.54378	0.00032539	-1.0381	-0.00062116	598.381910376305	40.152	1.105	40.741	40.044	41.149	0.58915					94	27	5	0	0	0	0.86589	1	3371	3371		29.15	0	1	9102300	+		30032	18264	20095	20105	34149	34149					0.15928020604565063
LLGKLWQPLK	10	Unmodified	_LLGKLWQPLK_					0	0	0			REV__ENSG00000117480|ENST00000243167|FAAH	REV__ENSG00000117480|ENST00000243167|FAAH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.38134765625	2	598.381709	1194.74886	-1.7641	-0.0010556	1.2492	0.00074748	-0.51497	-0.00030815	598.3824318861281	41.194	0.78385	41.828	41.496	42.28	0.6339					56	21	3	0	0	0	0.71042	1	3551	3551		44.117	3.3386	1	4475400	+		30033	18264	20095	20105	34150	34150					0.15928020604565063
LLGKMQGGAR	10	Oxidation (M)	_LLGKM(Oxidation (M))QGGAR_		LLGKM(1)QGGAR		LLGKM(42)QGGAR	0	0	1			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7938842773438	2	523.792401	1045.57025	1.1929	0.00062481	1.6583	0.00086859	2.8511	0.0014934	523.7931742755334	19.706	1.4854	19.236	18.928	20.414	-0.46967					77	32	3	0	0	0	0.74274	1	583	583		42.396	8.8806	1	1002100	+		30034	23985	20096	20106	34151	34151		373			0.04928607694000675
LLGKMQGGAR	10	Oxidation (M)	_LLGKM(Oxidation (M))QGGAR_					0	0	1			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	523.792401	1045.57025	-1.7952	-0.00094032	6.6051	0.0034597	4.8099	0.0025194	523.7965041298527	19.525	0.12142	19.525	19.464	19.585	0	0.14966	0.0037814	NaN	42.396	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16884	+		30035	23985	20096	20106				373			0.04928607694000675
LLGKMQGGAR	10	Oxidation (M)	_LLGKM(Oxidation (M))QGGAR_					0	0	1			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	523.792401	1045.57025	0.96259	0.0005042	1.8434	0.00096555	2.806	0.0014698	523.7932033256988	19.642	0.64291	19.572	19.369	20.012	-0.070013	0.19646	-0.0012069	NaN	42.396	41	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47504	+		30036	23985	20096	20106				373			0.04928607694000675
LLGKPLNG	8	Unmodified	_LLGKPLNG_					0	0	0		ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852478027344	2	406.255446	810.496338	-0.16356	-6.6448E-05	3.8062	0.0015463	3.6426	0.0014798	406.2569111116831	35.435	1.1247	35.422	34.849	35.974	-0.012203					31	26	2	0	0	0	0.4196	1	2211	2211		19.36	0	1	28221			30037	13086	20097	20107	34152	34152					0.08351007594001203
LLGKPLNG	8	Unmodified	_LLGKPLNG_					0	0	0		ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2561950683594	2	406.255446	810.496338	0.32239	0.00013097	4.1267	0.0016765	4.4491	0.0018075	406.25699058298386	55.031	2.344	55.122	53.969	56.313	0.091167					99	72	2	0	0	0	0.81548	1	4668	4668		20.482	0	1	315510			30038	13086	20097	20107	34153	34153					0.08351007594001203
LLGKPLNG	8	Unmodified	_LLGKPLNG_					0	0	0		ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.256103515625	2	406.255446	810.496338	0.40708	0.00016538	3.217	0.0013069	3.624	0.0014723	406.25658192543807	64.684	1.5075	64.808	63.9	65.408	0.12397					94	59	2	0	0	0	0.81548	2	5611	5611;5731		25.45	0	1	141770			30039	13086	20097	20107	34154;34155	34154					0.08351007594001203
LLGKPLNG	8	Unmodified	_LLGKPLNG_					0	0	0		ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2590637207031	2	406.255446	810.496338	0.42655	0.00017329	3.2952	0.0013387	3.7217	0.001512	406.2566706116534	66.482	0.82449	66.608	66.363	67.188	0.12649					65	38	2	0	0	0	0.86288	1	5910	5910		26.796	2.5934	1	124840			30040	13086	20097	20107	34156	34156					0.08351007594001203
LLGKPLNG	8	Unmodified	_LLGKPLNG_					0	0	0		ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2574768066406	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.86791	1	3788	3788		28.254	0	1	334920			30041	13086	20097	20107	34157	34157					0.08351007594001203
LLGKPLNG	8	Unmodified	_LLGKPLNG_					0	0	0		ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.255446	810.496338	-0.51521	-0.00020931	4.5102	0.0018323	3.9949	0.001623	406.25728672947844	66.52	0.23403	66.485	66.396	66.63	-0.035217	0.018698	0.00048624	NaN	26.796	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91338			30042	13086	20097	20107							0.08351007594001203
LLGKPLNG	8	Unmodified	_LLGKPLNG_					0	0	0		ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	406.255446	810.496338	-1.1608	-0.00047158	4.8413	0.0019668	3.6805	0.0014952	406.2572113300941	66.304	0.45341	66.349	66.253	66.706	0.045113	-0.11715	0.00075531	NaN	26.796	31	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116830			30043	13086	20097	20107							0.08351007594001203
LLGKPLNG	8	Unmodified	_LLGKPLNG_					0	0	0		ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	ENST00000515577.1_1_5:126478784-126478904:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	406.255446	810.496338	1.2454	0.00050594	2.5819	0.0010489	3.8272	0.0015548	406.25647696183125	66.037	0.55819	66.423	66.028	66.586	0.38581	-0.043484	-0.0010805	NaN	26.796	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71510			30044	13086	20097	20107							0.08351007594001203
LLGKQTVNH	9	Unmodified	_LLGKQTVNH_					0	0	0		ENST00000488261.6_3_10:135271820-135304727:+|nuORF	ENST00000488261.6_3_10:135271820-135304727:+|nuORF	ENST00000488261.6_3_10:135271820-135304727:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.68304443359375	2	505.293091	1008.57163	1.6989	0.00085844	-4.4587	-0.0022529	-2.7598	-0.0013945	505.2907806907368	97.072	1.3906	97.462	97.031	98.422	0.39065					54	33	2	0	0	0	0.20789	1	11829	11829		34.173	0	1	676110			30045	12619	20098	20108	34158	34158					0.06768565054414921
LLGKRWLA	8	Unmodified	_LLGKRWLA_					0	0	0			REV__nc|ENSG00000179869|Q86UQ4|ABCA13	REV__nc|ENSG00000179869|Q86UQ4|ABCA13	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8056335449219	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.562	1	42.524	42.024	43.024	-0.038223								0	0	0	0.29568	1	3279	3279		35.201	7.3185	1		+		30046	22360	20099	20109	34159	34159					0.11714664647649897
LLGKVLRIDVN	11	Unmodified	_LLGKVLRIDVN_					0	0	0		ENSG00000143512|ENST00000343410|HHIPL2	ENSG00000143512|ENST00000343410|HHIPL2	ENSG00000143512|ENST00000343410|HHIPL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.93280029296875	3	413.930962	1238.77106	0.23139	9.5777E-05	4.1873	0.0017332	4.4187	0.001829	413.9326448757643	44.768	3.3816	44.817	43.631	47.012	0.048996					183	86	4	0	0	0	0.74405	1	3234	3234		23.378	4.2744	1	706670			30047	4639	20100	20110	34160	34160					0.161222002823024
LLGKVLVA	8	Unmodified	_LLGKVLVA_					0	0	0		nc|ENSG00000117868|A0FGR8-5|ESYT2;ENST00000435514.3_1_7:158526900-158536411:-|nuORF;ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7851257324219	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.80706	2	1819	1792;1819		26.796	6.3143	1	1606100			30048	3004	20101	20111	34161;34162	34162					0.13981055150509292
LLGKVLVA	8	Unmodified	_LLGKVLVA_					0	0	0		nc|ENSG00000117868|A0FGR8-5|ESYT2;ENST00000435514.3_1_7:158526900-158536411:-|nuORF;ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78515625	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.80706	2	1854	1832;1854		26.796	6.3143	1	1965300			30049	3004	20101	20111	34163;34164	34164					0.13981055150509292
LLGKVLVA	8	Unmodified	_LLGKVLVA_					0	0	0		nc|ENSG00000117868|A0FGR8-5|ESYT2;ENST00000435514.3_1_7:158526900-158536411:-|nuORF;ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852478027344	2	406.783839	811.553125	1.6742	0.00068103	2.1022	0.00085513	3.7764	0.0015362	406.78458476785784	34.278	1.4525	34.281	33.794	35.247	0.0026054					117	34	4	0	0	0	0.82419	1	2168	2168		13.775	0.81615	1	2275400			30050	3004	20101	20111	34165	34165					0.13981055150509292
LLGKVLVA	8	Unmodified	_LLGKVLVA_					0	0	0		nc|ENSG00000117868|A0FGR8-5|ESYT2;ENST00000435514.3_1_7:158526900-158536411:-|nuORF;ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853088378906	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.173	1	32.284	31.784	32.784	0.11117								0	0	0	0.30252	1	1501	1501		19.36	4.6959	1				30051	3004	20101	20111	34166	34166					0.13981055150509292
LLGKVLVA	8	Unmodified	_LLGKVLVA_					0	0	0		nc|ENSG00000117868|A0FGR8-5|ESYT2;ENST00000435514.3_1_7:158526900-158536411:-|nuORF;ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7851867675781	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.3	1	32.411	31.911	32.911	0.11117								0	0	0	0.30252	1	1512	1512		19.36	5.5846	1				30052	3004	20101	20111	34167	34167					0.13981055150509292
LLGKVLVA	8	Unmodified	_LLGKVLVA_					0	0	0		nc|ENSG00000117868|A0FGR8-5|ESYT2;ENST00000435514.3_1_7:158526900-158536411:-|nuORF;ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7845458984375	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.884	1	1803	1803		33.516	13.034	1	1879900			30053	3004	20101	20111	34168	34168					0.13981055150509292
LLGKVLVA	8	Unmodified	_LLGKVLVA_					0	0	0		nc|ENSG00000117868|A0FGR8-5|ESYT2;ENST00000435514.3_1_7:158526900-158536411:-|nuORF;ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	nc|ENSG00000117868|A0FGR8-5|ESYT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7853698730469	2	406.783839	811.553125	0.34779	0.00014148	3.2583	0.0013254	3.6061	0.0014669	406.7850428339316	31.533	1.6322	31.64	30.856	32.488	0.10707					116	37	4	0	0	0	0.88915	1	2197	2197		35.201	6.9464	1	5012000			30054	3004	20101	20111	34169	34169					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78533935546875	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.80706	2	1845	1723;1845		28.254	6.5519	1	1606100			30055	1863	20102	20112	34170;34171	34171					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78515625	2	406.783839	811.553125	-0.045049	-1.8325E-05	3.807	0.0015486	3.7619	0.0015303	406.78524079935227	33.287	0.97472	33.291	32.894	33.869	0.0030785					79	22	4	0	0	0	0.80706	1	1888	1888		19.36	3.7238	1	346170			30056	1863	20102	20112	34172	34172					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78466796875	2	406.783839	811.553125	-0.12701	-5.1665E-05	4.0102	0.0016313	3.8832	0.0015796	406.7853480704683	34.439	1.4356	34.434	33.818	35.254	-0.0047417					125	35	4	0	0	0	0.81548	2	2166	2073;2166		44.531	9.3304	1	1552500			30057	1863	20102	20112	34173;34174	34174					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7851257324219	2	406.783839	811.553125	-0.45573	-0.00018539	4.0823	0.0016606	3.6266	0.0014752	406.7853476026277	33.431	0.94502	33.374	32.967	33.912	-0.056385					79	22	4	0	0	0	0.86791	2	2008	2008;2030		33.516	7.7724	1	606440			30058	1863	20102	20112	34175;34176	34175					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7851257324219	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.86791	1	1896	1896		28.254	6.5519	1	1965300			30059	1863	20102	20112	34177	34177					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78521728515625	2	406.783839	811.553125	1.9606	0.00079753	1.7235	0.0007011	3.6841	0.0014986	406.7843974234306	33.155	0.95889	33.153	32.87	33.829	-0.0016365					72	22	4	0	0	0	0.81548	5	1946	1935;1946;1983;1994;2015		35.201	8.4046	1	517740			30060	1863	20102	20112	34178;34179;34180;34181;34182	34179					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.784912109375	2	406.783839	811.553125	1.6742	0.00068103	2.1022	0.00085513	3.7764	0.0015362	406.78458476785784	34.278	1.4525	34.281	33.794	35.247	0.0026054					117	34	4	0	0	0	0.81548	1	2179	2179		20.482	5.8177	1	2275400			30061	1863	20102	20112	34183	34183					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853088378906	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.80706	6	1744	1693;1716;1725;1734;1744;1782		28.254	7.7724	1	1756100			30062	1863	20102	20112	34184;34185;34186;34187;34188;34189	34188					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852478027344	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32	1	32.112	31.612	32.612	0.11117								0	0	0	0.29353	1	1488	1488		28.254	0	1				30063	1863	20102	20112	34190	34190					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853698730469	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.996	1	33.106	32.606	33.606	0.10991								0	0	0	0.30004	1	1575	1575		21.702	1.2205	1				30064	1863	20102	20112	34191	34191					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7851257324219	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.12	1	33.23	32.73	33.73	0.10991								0	0	0	0.30004	1	1591	1591		21.702	0	1				30065	1863	20102	20112	34192	34192					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7848205566406	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.559	1	33.669	33.169	34.169	0.10991								0	0	0	0.30674	1	1648	1648		15.636	0.97212	1				30066	1863	20102	20112	34193	34193					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78515625	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.82419	1	1412	1412		13.775	4.3048	1	1817700			30067	1863	20102	20112	34194	34194					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78521728515625	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.82419	4	1752	1699;1706;1716;1752		44.531	16.277	1	1879900			30068	1863	20102	20112	34195;34196;34197;34198	34198					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.29632568359375	2	406.783839	811.553125	-0.10358	-4.2135E-05	3.635	0.0014787	3.5314	0.0014365	406.78527397296267	36.52	1.1852	36.46	36.05	37.235	-0.060337					48	33	2	0	0	0	0.4196	1	2091	2091		8.8223	0	1	89574			30069	1863	20102	20112	34199	34199					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7852478027344	2	406.783839	811.553125	1.6031	0.00065213	2.1137	0.0008598	3.7168	0.0015119	406.78457300863613	33.544	1.5003	33.714	33.314	34.814	0.16971					120	35	4	0	0	0	0.81548	4	2474	2474;2485;2497;2524		28.254	7.7724	1	8051400			30070	1863	20102	20112	34200;34201;34202;34203	34200					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7852783203125	2	406.783839	811.553125	0.30634	0.00012461	3.4308	0.0013956	3.7371	0.0015202	406.7851080123586	29.615	1.556	29.525	28.974	30.53	-0.089546					92	35	4	0	0	0	0.85277	1	1873	1873		25.45	3.7478	1	1963500			30071	1863	20102	20112	34204	34204					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78460693359375	2	406.783839	811.553125	0.34779	0.00014148	3.2583	0.0013254	3.6061	0.0014669	406.7850428339316	31.533	1.6322	31.64	30.856	32.488	0.10707					116	37	4	0	0	0	0.81548	1	2270	2270		20.482	6.7065	1	5012000			30072	1863	20102	20112	34205	34205					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78497314453125	2	406.783839	811.553125	0.72345	0.00029429	2.8619	0.0011642	3.5854	0.0014585	406.7848598488789	32.675	0.80478	32.887	32.55	33.355	0.21168					52	18	3	0	0	0	0.82419	1	2306	2306		13.775	0	1	1157900			30073	1863	20102	20112	34206	34206					0.13981055150509292
LLGKVVAL	8	Unmodified	_LLGKVVAL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7852478027344	2	406.783839	811.553125	0.94675	0.00038512	2.7522	0.0011195	3.699	0.0015047	406.78484451151587	33.529	1.369	33.798	33.413	34.781	0.26929					111	32	4	0	0	0	0.81548	4	2475	2405;2425;2475;2499		33.516	6.7195	1	7385300			30074	1863	20102	20112	34207;34208;34209;34210	34209					0.13981055150509292
LLGLAIAGP	9	Unmodified	_LLGLAIAGP_					0	0	0		ENSG00000175489|ENST00000339007|LRRC25	ENSG00000175489|ENST00000339007|LRRC25	ENSG00000175489|ENST00000339007|LRRC25	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.766845703125	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.481	1	48.475	47.975	48.975	-0.0056419								0	0	0	0.30219	1	4005	4005		29.842	0	1				30075	7021	20103	20113	34211	34211					0.09792178253815109
LLGLAIAGP	9	Unmodified	_LLGLAIAGP_					0	0	0		ENSG00000175489|ENST00000339007|LRRC25	ENSG00000175489|ENST00000339007|LRRC25	ENSG00000175489|ENST00000339007|LRRC25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76666259765625	2	412.765646	823.516739	-1.2234	-0.00050499	3.8954	0.0016079	2.6719	0.0011029	412.7673243915212	41.944	1.8566	41.905	41.33	43.186	-0.038223					75	44	2	0	0	0	0.7932	1	3154	3154		21.702	0	1	796850			30076	7021	20103	20113	34212	34212					0.09792178253815109
LLGLAIAGP	9	Unmodified	_LLGLAIAGP_					0	0	0		ENSG00000175489|ENST00000339007|LRRC25	ENSG00000175489|ENST00000339007|LRRC25	ENSG00000175489|ENST00000339007|LRRC25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76690673828125	2	412.765646	823.516739	-0.80567	-0.00033255	3.6306	0.0014986	2.8249	0.001166	412.76743574244557	48.894	3.0852	48.869	47.646	50.731	-0.025112					171	74	4	0	0	0	0.7932	1	4106	4106		21.702	0	1	642490			30077	7021	20103	20113	34213	34213					0.09792178253815109
LLGLALLPLMR	11	Unmodified	_LLGLALLPLMR_					0	0	0			REV__ENSG00000196136|ENST00000393078|SERPINA3	REV__ENSG00000196136|ENST00000393078|SERPINA3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.92987060546875	3	403.929905	1208.76789	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.146	1	48.144	47.644	48.644	-0.002449								0	0	0	0.56276	1	3990	3990		12.957	1.0251	1		+		30078	23094	20104	20114	34214	34214					0.17185233903956032
LLGLALLPLMR	11	Unmodified	_LLGLALLPLMR_					0	0	0			REV__ENSG00000196136|ENST00000393078|SERPINA3	REV__ENSG00000196136|ENST00000393078|SERPINA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9298095703125	3	403.929905	1208.76789	-1.8895	-0.00076324	0.94443	0.00038148	-0.9451	-0.00038175	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.74022	1	3552	3552		24.232	4.9691	1	2300300	+		30079	23094	20104	20114	34215	34215					0.17185233903956032
LLGLALLPLMR	11	Unmodified	_LLGLALLPLMR_					0	0	0			REV__ENSG00000196136|ENST00000393078|SERPINA3	REV__ENSG00000196136|ENST00000393078|SERPINA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9295349121094	3	403.929905	1208.76789	0.41682	0.00016837	-1.4098	-0.00056947	-0.99301	-0.00040111	403.92919444194524	46.164	0.84489	46.636	46.254	47.099	0.47139					60	20	4	0	0	0	0.78683	1	4307	4307		14.086	3.9821	1	1771500	+		30080	23094	20104	20114	34216	34216					0.17185233903956032
LLGLALLPLMR	11	Unmodified	_LLGLALLPLMR_					0	0	0			REV__ENSG00000196136|ENST00000393078|SERPINA3	REV__ENSG00000196136|ENST00000393078|SERPINA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9294738769531	3	403.929905	1208.76789	-1.067	-0.00043099	-0.46891	-0.00018941	-1.5359	-0.0006204	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.73621	1	4220	4220		25.126	5.8633	1	5907700	+		30081	23094	20104	20114	34217	34217					0.17185233903956032
LLGLAPGLA	9	Unmodified	_LLGLAPGLA_					0	0	0			REV__ENSG00000080573|ENST00000264828|COL5A3	REV__ENSG00000080573|ENST00000264828|COL5A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7670593261719	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.78292	1	2525	2525		29.842	0	1	2097300	+		30082	16806	20105	20115	34218	34218					0.0979217825380374
LLGLAREFL	9	Unmodified	_LLGLAREFL_					0	0	0		nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2;ENSG00000160796|ENST00000450053|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3135986328125	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.3064	-0.0011908	-3.8683	-0.0019972	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.78058	1	10678	10678		30.504	4.9296	1	1268100			30083	5607	20106	20116	34219	34219					0.10343210236646883
LLGLAVEIV	9	Unmodified	_LLGLAVEIV_					0	0	0		nc|ENSG00000115155|Q9HC10-5|OTOF;ENSG00000115155|ENST00000272371|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.8002624511719	2	463.799686	925.584819	-1.9529	-0.00090576	3.5624	0.0016523	1.6095	0.0007465	463.801178460678	42.067	1.8831	42.764	41.947	43.83	0.69754					154	47	4	0	0	0	0.7932	1	3727	3727		26.796	6.3143	1	6253400			30084	2814	20107	20117	34220	34220					0.11905003113815837
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852783203125	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.81724	7	1854	1735;1746;1758;1774;1785;1829;1854		35.201	8.4046	1	1606100	+		30085	23145	20108	20118	34221;34222;34223;34224;34225;34226;34227	34227					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78515625	2	406.783839	811.553125	-0.045049	-1.8325E-05	3.807	0.0015486	3.7619	0.0015303	406.78524079935227	33.287	0.97472	33.291	32.894	33.869	0.0030785					79	22	4	0	0	0	0.86791	1	1946	1946		28.254	0	1	346170	+		30086	23145	20108	20118	34228	34228					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78521728515625	2	406.783839	811.553125	-0.12701	-5.1665E-05	4.0102	0.0016313	3.8832	0.0015796	406.7853480704683	34.439	1.4356	34.434	33.818	35.254	-0.0047417					125	35	4	0	0	0	0.81548	2	2103	2103;2134		26.796	5.8177	1	1552500	+		30087	23145	20108	20118	34229;34230	34229					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7852783203125	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.80706	5	1911	1844;1856;1900;1911;1958		54.765	17.736	1	1953100	+		30088	23145	20108	20118	34231;34232;34233;34234;34235	34234					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852478027344	2	406.783839	811.553125	2.7329	0.0011117	1.0571	0.00043001	3.79	0.0015417	406.7841375125675	29.651	1.9122	29.636	28.895	30.807	-0.015167					147	57	4	0	0	0	0.81548	1	1562	1562		20.482	4.8456	1	914260	+		30089	23145	20108	20118	34236	34236					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78515625	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.79929	9	1716	1716;1768;1780;1792;1804;1814;1823;1843;1877		35.201	7.4361	1	1965300	+		30090	23145	20108	20118	34237;34238;34239;34240;34241;34242;34243;34244;34245	34237					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7853088378906	2	406.783839	811.553125	1.6742	0.00068103	2.1022	0.00085513	3.7764	0.0015362	406.78458476785784	34.278	1.4525	34.281	33.794	35.247	0.0026054					117	34	4	0	0	0	0.86288	1	2097	2097		26.796	5.0938	1	2275400	+		30091	23145	20108	20118	34246	34246					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78533935546875	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.80706	2	1707	1700;1707		42.474	7.2737	1	1756100	+		30092	23145	20108	20118	34247;34248	34248					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78515625	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.441	1	31.553	31.053	32.053	0.11198								0	0	0	0.30252	1	1442	1442		19.36	5.5846	1		+		30093	23145	20108	20118	34249	34249					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.785400390625	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.554	1	31.666	31.166	32.166	0.11175								0	0	0	0.30252	1	1451	1451		19.36	4.6959	1		+		30094	23145	20108	20118	34250	34250					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852478027344	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.621	1	31.732	31.232	32.232	0.11117								0	0	0	0.29498	1	1458	1458		26.796	6.3143	1		+		30095	23145	20108	20118	34251	34251					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7850036621094	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.68	1	31.791	31.291	32.291	0.11117								0	0	0	0.30252	1	1462	1462		19.36	4.6959	1		+		30096	23145	20108	20118	34252	34252					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852783203125	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.745	1	31.856	31.356	32.356	0.11117								0	0	0	0.30252	1	1467	1467		19.36	4.6959	1		+		30097	23145	20108	20118	34253	34253					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853088378906	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.805	1	31.916	31.416	32.416	0.11117								0	0	0	0.30316	1	1473	1473		42.474	7.2737	1		+		30098	23145	20108	20118	34254	34254					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853698730469	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.245	1	32.356	31.856	32.856	0.11117								0	0	0	0.30252	1	1507	1507		19.36	4.6959	1		+		30099	23145	20108	20118	34255	34255					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853698730469	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.678	1	32.788	32.288	33.288	0.10991								0	0	0	0.29353	1	1543	1543		28.254	7.7724	1		+		30100	23145	20108	20118	34256	34256					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7848205566406	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.812	1	32.922	32.422	33.422	0.10991								0	0	0	0.30884	1	1557	1557		13.775	0	1		+		30101	23145	20108	20118	34257	34257					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7849426269531	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.81548	1	1285	1285		20.482	4.8456	1	1286900	+		30102	23145	20108	20118	34258	34258					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852783203125	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.86288	3	1468	1468;1478;1490		26.796	5.0938	1	1817700	+		30103	23145	20108	20118	34259;34260;34261	34259					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78515625	2	406.783839	811.553125	-0.059143	-2.4059E-05	3.8477	0.0015652	3.7885	0.0015411	406.78528338513706	35.439	0.98428	35.378	35.066	36.05	-0.060333					48	30	2	0	0	0	0.86791	1	1855	1855		28.254	6.5519	1	346370	+		30104	23145	20108	20118	34262	34262					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.785400390625	2	406.783839	811.553125	0.13384	5.4446E-05	3.7055	0.0015073	3.8393	0.0015618	406.7852062914835	29.439	1.7033	29.41	28.91	30.613	-0.029207					106	38	4	0	0	0	0.81548	1	1874	1874		20.482	5.8177	1	2367100	+		30105	23145	20108	20118	34263	34263					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7851867675781	2	406.783839	811.553125	0.56827	0.00023116	3.0171	0.0012273	3.5854	0.0014585	406.78493901596437	31.598	1.6437	31.678	30.856	32.5	0.079834					110	37	4	0	0	0	0.80706	5	2125	2125;2137;2149;2161;2197		26.796	5.0938	1	5409400	+		30106	23145	20108	20118	34264;34265;34266;34267;34268	34264					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7852478027344	2	406.783839	811.553125	1.6031	0.00065213	2.1137	0.0008598	3.7168	0.0015119	406.78457300863613	33.544	1.5003	33.714	33.314	34.814	0.16971					120	35	4	0	0	0	0.86288	3	2413	2413;2425;2462		44.531	7.5026	1	8051400	+		30107	23145	20108	20118	34269;34270;34271	34269					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78521728515625	2	406.783839	811.553125	0.34779	0.00014148	3.2583	0.0013254	3.6061	0.0014669	406.7850428339316	31.533	1.6322	31.64	30.856	32.488	0.10707					116	37	4	0	0	0	0.80706	3	2161	2161;2173;2185		26.796	5.0938	1	5012000	+		30108	23145	20108	20118	34272;34273;34274	34272					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7852478027344	2	406.783839	811.553125	0.72345	0.00029429	2.8619	0.0011642	3.5854	0.0014585	406.7848598488789	32.675	0.80478	32.887	32.55	33.355	0.21168					52	18	3	0	0	0	0.81548	1	2318	2318		20.482	0	1	1157900	+		30109	23145	20108	20118	34275	34275					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.22454833984375	2	406.783839	811.553125	0.27409	0.0001115	3.643	0.0014819	3.9171	0.0015934	406.78523362797415	37.348	1.3111	37.834	37.325	38.636	0.48581					52	32	2	0	0	0	0.4196	1	3122	3122		14.664	0.88877	1	152080	+		30110	23145	20108	20118	34276	34276					0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.783839	811.553125	-1.9977	-0.00081265	5.7555	0.0023412	3.7577	0.0015286	406.7860596776976	31.998	2.4288	31.998	30.641	33.07	0	0.09709	0.0013065	NaN	26.796	263	95	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2342000	+		30111	23145	20108	20118							0.1398105515052066
LLGLAVVK	8	Unmodified	_LLGLAVVK_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.783839	811.553125	-1.9176	-0.00078006	5.7526	0.0023401	3.835	0.00156	406.7860266287786	32.059	2.3915	32.117	30.697	33.088	0.058315	0.2165	0.0013042	NaN	26.796	281	116	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1994800	+		30112	23145	20108	20118							0.1398105515052066
LLGLCALQI	9	Unmodified	_LLGLCALQI_					0	0	0			REV__nc|ENSG00000113073|Q96Q91-4|SLC4A9	REV__nc|ENSG00000113073|Q96Q91-4|SLC4A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2877197265625	2	472.285889	942.557224	2.0257	0.00095671	1.7357	0.00081974	3.7614	0.0017765	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.69914	1	10133	10133		40.573	7.057	1	50843000	+		30113	17976	20109	20119	34277	34277					0.08364776581913702
LLGLCALQI	9	Unmodified	_LLGLCALQI_					0	0	0			REV__nc|ENSG00000113073|Q96Q91-4|SLC4A9	REV__nc|ENSG00000113073|Q96Q91-4|SLC4A9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2879943847656	2	472.285889	942.557224	1.4182	0.00066978	2.7208	0.001285	4.1389	0.0019548	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.74905	2	11564	11429;11564		37.028	1.4102	1	21289000	+		30114	17976	20109	20119	34278;34279	34279					0.08364776581913702
LLGLDELLP	9	Unmodified	_LLGLDELLP_					0	0	0			REV__nc|ENSG00000106078|O75128-6|COBL	REV__nc|ENSG00000106078|O75128-6|COBL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79547119140625	2	491.794601	981.574648	-1.7104	-0.00084119	3.9454	0.0019403	2.2349	0.0010991	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.7932	1	4248	4248		25.45	3.7478	1	1232600	+		30115	17596	20110	20120	34280	34280					0.08312395388577443
LLGLDKFRPPL	11	Unmodified	_LLGLDKFRPPL_					0	0	0		ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7;ENST00000591524.1_1_18:54424563-54448991:+|nuORF	ENSG00000091157|ENST00000254442|WDR7	ENSG00000091157|ENST00000254442|WDR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8932495117188	2	634.889898	1267.76524	-0.13084	-8.307E-05	4.2165	0.002677	4.0856	0.0025939	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.63176	1	11651	11651		40.778	2.9666	1	40768000			30116	1672	20111	20121	34281	34281					0.14207101770671215
LLGLDKFRPPL	11	Unmodified	_LLGLDKFRPPL_					0	0	0		ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7;ENST00000591524.1_1_18:54424563-54448991:+|nuORF	ENSG00000091157|ENST00000254442|WDR7	ENSG00000091157|ENST00000254442|WDR7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8929443359375	2	634.889898	1267.76524	1.4999	0.00095225	2.3399	0.0014856	3.8398	0.0024378	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.5603	1	11286	11286		47.657	0	1	68597000			30117	1672	20111	20121	34282	34282					0.14207101770671215
LLGLDKFRPPL	11	Unmodified	_LLGLDKFRPPL_					0	0	0		ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7;ENST00000591524.1_1_18:54424563-54448991:+|nuORF	ENSG00000091157|ENST00000254442|WDR7	ENSG00000091157|ENST00000254442|WDR7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.89306640625	2	634.889898	1267.76524	0.93451	0.00059331	2.8473	0.0018077	3.7818	0.002401	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.5603	1	11395	11395		47.657	5.2612	1	69492000			30118	1672	20111	20121	34283	34283					0.14207101770671215
LLGLDKFRPPL	11	Unmodified	_LLGLDKFRPPL_					0	0	0		ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7;ENST00000591524.1_1_18:54424563-54448991:+|nuORF	ENSG00000091157|ENST00000254442|WDR7	ENSG00000091157|ENST00000254442|WDR7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.892578125	2	634.889898	1267.76524	1.9684	0.0012497	2.2129	0.0014049	4.1812	0.0026546	634.8913842364989	105.48	2.7267	105.63	104.93	107.65	0.15583					244	94	5	0	0	0	0.65746	1	12798	12798		37.812	0	1	2461800			30119	1672	20111	20121	34284	34284					0.14207101770671215
LLGLDKFRPPL	11	Unmodified	_LLGLDKFRPPL_					0	0	0		ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7;ENST00000591524.1_1_18:54424563-54448991:+|nuORF	ENSG00000091157|ENST00000254442|WDR7	ENSG00000091157|ENST00000254442|WDR7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8930053710938	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.01	1	105.23	104.73	105.73	0.2268								0	0	0	0.56276	1	12834	12834		24.519	0.99649	1				30120	1672	20111	20121	34285	34285					0.14207101770671215
LLGLDKFRPPL	11	Unmodified	_LLGLDKFRPPL_					0	0	0		ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7;ENST00000591524.1_1_18:54424563-54448991:+|nuORF	ENSG00000091157|ENST00000254442|WDR7	ENSG00000091157|ENST00000254442|WDR7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8927001953125	2	634.889898	1267.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.24	1	105.43	104.93	105.93	0.18647								0	0	0	0.56276	1	12866	12866		44.377	6.5657	1				30121	1672	20111	20121	34286	34286					0.14207101770671215
LLGLDPAL	8	Unmodified	_LLGLDPAL_					0	0	0		ENST00000429683.1_1_22:32021901-32028265:-|nuORF	ENST00000429683.1_1_22:32021901-32028265:-|nuORF	ENST00000429683.1_1_22:32021901-32028265:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2481689453125	2	406.249829	810.485105	1.1516	0.00046786	-4.2235	-0.0017158	-3.0718	-0.0012479	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.86791	1	9143	9143		28.254	1.4582	1	58759000			30122	11612	20112	20122	34287	34287					0.07228185499855044
LLGLDPSALL	10	Unmodified	_LLGLDPSALL_					0	0	0			REV__ENSG00000130522|ENST00000252818|JUND	REV__ENSG00000130522|ENST00000252818|JUND	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.3085632324219	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.328	1	54.351	53.851	54.851	0.022541								0	0	0	0.45132	1	4825	4825		37.159	1.5408	1		+		30123	18880	20113	20123	34288	34288					0.09632084279917308
LLGLFVLVHRE	11	Unmodified	_LLGLFVLVHRE_					0	0	0		nc|ENSG00000140612|P67812-2|SEC11A;ENSG00000140612|ENST00000268220|SEC11A;nc|ENSG00000226098|P0C7V7|SEC11B;ENST00000560409.5_1_15:85213252-85222467:-|nuORF;ENST00000558924.1_1_15:85213252-85214072:-|nuORF;ENST00000560266.5_1_15:85213252-85223982:-|nuORF	nc|ENSG00000140612|P67812-2|SEC11A	nc|ENSG00000140612|P67812-2|SEC11A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.597900390625	3	432.599324	1294.77614	-1.5719	-0.00068002	-2.1954	-0.00094973	-3.7673	-0.0016298	432.5984109358272	105.99	1.0468	106.14	105.65	106.69	0.14843					117	25	6	0	0	0	0.73893	1	11353	11353		21.78	0	1	44749000			30124	4451	20114	20124	34289	34289					0.14054504144951352
LLGLGAPLP	9	Unmodified	_LLGLGAPLP_					0	0	0			REV__ENSG00000167800|ENST00000335385|TBX10	REV__ENSG00000167800|ENST00000335385|TBX10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.2938537597656	2	425.773471	849.53239	0.51115	0.00021763	-0.99532	-0.00042378	-0.48417	-0.00020615	425.7745863480704	75.949	0.49388	76.083	75.939	76.433	0.13325					21	14	2	0	0	0	0.20789	1	7125	7125		21.702	12.88	1	50840	+		30125	21429	20115	20125	34290	34290					0.10160464770854105
LLGLGAPLP	9	Unmodified	_LLGLGAPLP_					0	0	0			REV__ENSG00000167800|ENST00000335385|TBX10	REV__ENSG00000167800|ENST00000335385|TBX10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.2938537597656	2	425.773471	849.53239	0.51468	0.00021914	4.3526	0.0018532	4.8673	0.0020724	425.7743549566631	76.462	0.44093	76.595	76.268	76.709	0.13325					18	13	2	0	0	0	0.20789	1	7125	7125		21.702	12.88	1	42393	+		30126	21429	20115	20125	34291	34291					0.10160464770854105
LLGLGHLALN	10	Unmodified	_LLGLGHLALN_					0	0	0		ENSG00000204839|ENST00000398882|MROH6	ENSG00000204839|ENST00000398882|MROH6	ENSG00000204839|ENST00000398882|MROH6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.29791259765625	2	510.813659	1019.61277	-0.62371	-0.0003186	-0.9278	-0.00047393	-1.5515	-0.00079253	510.81316986984535	61.736	1.2112	62.125	61.671	62.882	0.38845					36	27	2	0	0	0	0.37624	1	6610	6610		38.806	17.104	1	61061			30127	8488	20116	20126	34292	34292					0.10374326093881336
LLGLGHPWR	9	Unmodified	_LLGLGHPWR_					0	0	0		ENST00000474787.1_1_9:139974763-139976621:+|nuORF	ENST00000474787.1_1_9:139974763-139976621:+|nuORF	ENST00000474787.1_1_9:139974763-139976621:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8267822265625	2	524.806168	1047.59778	2.8975	0.0015206	3.17	0.0016637	6.0675	0.0031843	524.8075448465744	99.391	0.65221	99.337	98.955	99.607	-0.053734					22	15	2	0	0	0	0.20789	1	10761	10761		33.516	3.674	1	116220			30128	12310	20117	20127	34293	34293					0.07588879016566352
LLGLGIVLN	9	Unmodified	_LLGLGIVLN_					0	0	0			REV__ENST00000446716.5_1_2:220075515-220081188:-|nuORF	REV__ENST00000446716.5_1_2:220075515-220081188:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3030700683594	2	456.299853	910.585153	-1.7707	-0.00080797	4.1491	0.0018932	2.3784	0.0010852	456.3016315256623	46.489	1.398	46.489	46.06	47.458	0					92	40	3	0	0	0	0.7932	1	3627	3627		16.473	3.514	1	435240	+		30129	18139	20118	20128	34294	34294					0.12628422833643071
LLGLGIVLN	9	Unmodified	_LLGLGIVLN_					0	0	0			REV__ENST00000446716.5_1_2:220075515-220081188:-|nuORF	REV__ENST00000446716.5_1_2:220075515-220081188:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30108642578125	2	456.299853	910.585153	-0.11111	-5.0701E-05	2.9884	0.0013636	2.8773	0.0013129	456.3010566410468	35.268	1.48	35.256	34.768	36.248	-0.012203					106	34	4	0	0	0	0.76996	2	2212	2212;2239		33.516	3.7478	1	794600	+		30130	18139	20118	20128	34295;34296	34295					0.12628422833643071
LLGLGIVLN	9	Unmodified	_LLGLGIVLN_					0	0	0			REV__ENST00000446716.5_1_2:220075515-220081188:-|nuORF	REV__ENST00000446716.5_1_2:220075515-220081188:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7888488769531	2	456.299853	910.585153	-1.2451	-0.00056816	3.2428	0.0014797	1.9977	0.00091153	456.30110563656814	39.648	1.8838	39.657	38.891	40.774	0.0092773					96	45	4	0	0	0	0.20789	1	2915	2915		33.516	0	1	400680	+		30131	18139	20118	20128	34297	34297					0.12628422833643071
LLGLGIVLN	9	Unmodified	_LLGLGIVLN_					0	0	0			REV__ENST00000446716.5_1_2:220075515-220081188:-|nuORF	REV__ENST00000446716.5_1_2:220075515-220081188:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3006896972656	2	456.299853	910.585153	-0.34519	-0.00015751	3.1038	0.0014163	2.7586	0.0012588	456.30112978669194	48.146	1.4143	48.053	47.615	49.029	-0.093178					75	35	3	0	0	0	0.76996	1	3658	3658		33.516	5.2613	1	317120	+		30132	18139	20118	20128	34298	34298					0.12628422833643071
LLGLGIVLN	9	Unmodified	_LLGLGIVLN_					0	0	0			REV__ENST00000446716.5_1_2:220075515-220081188:-|nuORF	REV__ENST00000446716.5_1_2:220075515-220081188:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7900695800781	2	456.299853	910.585153	-0.092568	-4.2239E-05	1.2323	0.00056231	1.1398	0.00052008	456.3003048585014	41.005	1.968	40.959	40.305	42.273	-0.045471					112	64	2	0	0	0	0.20789	1	2742	2742		30.504	11.144	1	415770	+		30133	18139	20118	20128	34299	34299					0.12628422833643071
LLGLGLPVS	9	Unmodified	_LLGLGLPVS_					0	0	0		ENSG00000257008|ENST00000582579|GPR142;nc|ENSG00000257008|Q7Z601|GPR142	ENSG00000257008|ENST00000582579|GPR142	ENSG00000257008|ENST00000582579|GPR142	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7796630859375	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.7932	1	3953	3953		26.796	0	1	1803700			30134	8903	20119	20129	34300	34300					0.10388447425282266
LLGLGPEI	8	Unmodified	_LLGLGPEI_					0	0	0			REV__ENST00000564644.5_1_15:75917718-75917934:-|nuORF	REV__ENST00000564644.5_1_15:75917718-75917934:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.248291015625	2	406.249829	810.485105	-1.171	-0.0004757	-1.7314	-0.00070337	-2.9023	-0.0011791	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.884	1	8689	8689		33.516	6.7195	1	30016000	+		30135	28842	20120	20130	34301	34301					0.07228185499855044
LLGLGVIK	8	Unmodified	_LLGLGVIK_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7850341796875	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.82464	1	1641	1641		21.702	0	1	1606100	+		30136	20899	20121	20131	34302	34302					0.1398105515052066
LLGLGVIK	8	Unmodified	_LLGLGVIK_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.785400390625	2	406.783839	811.553125	-0.045049	-1.8325E-05	3.807	0.0015486	3.7619	0.0015303	406.78524079935227	33.287	0.97472	33.291	32.894	33.869	0.0030785					79	22	4	0	0	0	0.81724	1	1934	1934		14.664	0	1	346170	+		30137	20899	20121	20131	34303	34303					0.1398105515052066
LLGLGVIK	8	Unmodified	_LLGLGVIK_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78497314453125	2	406.783839	811.553125	1.9606	0.00079753	1.7235	0.0007011	3.6841	0.0014986	406.7843974234306	33.155	0.95889	33.153	32.87	33.829	-0.0016365					72	22	4	0	0	0	0.81548	1	1913	1913		20.482	0	1	517740	+		30138	20899	20121	20131	34304	34304					0.1398105515052066
LLGLGVIK	8	Unmodified	_LLGLGVIK_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78485107421875	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.81724	1	1221	1221		14.664	0.88877	1	1410200	+		30139	20899	20121	20131	34305	34305					0.1398105515052066
LLGLGVIK	8	Unmodified	_LLGLGVIK_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7854309082031	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.884	1	32.994	32.494	33.494	0.10991								0	0	0	0.30125	1	1566	1566		20.482	5.8177	1		+		30140	20899	20121	20131	34306	34306					0.1398105515052066
LLGLGVIK	8	Unmodified	_LLGLGVIK_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78509521484375	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.81548	1	1510	1510		20.482	4.8456	1	1817700	+		30141	20899	20121	20131	34307	34307					0.1398105515052066
LLGLGVIK	8	Unmodified	_LLGLGVIK_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78485107421875	2	406.783839	811.553125	0.72345	0.00029429	2.8619	0.0011642	3.5854	0.0014585	406.7848598488789	32.675	0.80478	32.887	32.55	33.355	0.21168					52	18	3	0	0	0	0.82419	1	2283	2283		13.775	0	1	1157900	+		30142	20899	20121	20131	34308	34308					0.1398105515052066
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.352783203125	2	611.354834	1220.69511	-0.25907	-0.00015838	2.238	0.0013682	1.9789	0.0012098	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.6921	1	9212	9212		32.812	8.2932	1	3360200			30143	5201	20122	20132	34309	34309					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.35791015625	2	611.354834	1220.69511	-0.22744	-0.00013904	3.0108	0.0018407	2.7834	0.0017016	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.69995	1	9652	9652		31.53	5.9558	1	8715400			30144	5201	20122	20132	34310	34310					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3551635742188	2	611.354834	1220.69511	2.1766	0.0013307	-0.33396	-0.00020417	1.8427	0.0011265	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.65746	3	9935	9923;9935;9972		37.812	10.764	1	5823000			30145	5201	20122	20132	34311;34312;34313	34312					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3551635742188	2	611.354834	1220.69511	2.4219	0.0014807	0.063844	3.9032E-05	2.4858	0.0015197	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.63176	3	10312	10264;10312;10384		40.778	7.7381	1	12656000			30146	5201	20122	20132	34314;34315;34316	34315					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3548583984375	2	611.354834	1220.69511	0.21559	0.0001318	1.6628	0.0010166	1.8784	0.0011484	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.6921	1	9799	9799		32.812	3.6424	1	5379900			30147	5201	20122	20132	34317	34317					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3551025390625	2	611.354834	1220.69511	0.21646	0.00013233	2.3298	0.0014243	2.5463	0.0015567	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.65746	1	10192	10192		37.812	2.6595	1	12399000			30148	5201	20122	20132	34318	34318					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3518676757812	2	611.354834	1220.69511	1.1383	0.00069592	0.67847	0.00041479	1.8168	0.0011107	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.6921	1	9599	9599		32.812	0	1	7316900			30149	5201	20122	20132	34319	34319					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.35595703125	2	611.354834	1220.69511	1.142	0.00069816	1.5785	0.00096504	2.7205	0.0016632	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.65746	4	9802	9802;9814;9850;9874		37.812	12.237	1	17478000			30150	5201	20122	20132	34320;34321;34322;34323	34320					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3552856445312	2	611.354834	1220.69511	0.85003	0.00051967	1.0308	0.00063016	1.8808	0.0011498	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.6921	2	9507	9507;9693		32.812	2.3598	1	6836400			30151	5201	20122	20132	34324;34325	34324					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.35546875	2	611.354834	1220.69511	0.8676	0.00053041	1.8536	0.0011332	2.7212	0.0016636	611.3560720152175	95.924	5.0581	96.087	95.071	100.13	0.16317					363	118	6	0	0	0	0.58425	2	9811	9811;9859		45.972	12.051	1	16539000			30152	5201	20122	20132	34326;34327	34326					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3546142578125	2	611.354834	1220.69511	-1.2523	-0.00076561	3.1276	0.0019121	1.8753	0.0011465	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.6921	1	9401	9401		32.812	3.6424	1	5978100			30153	5201	20122	20132	34328	34328					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3558349609375	2	611.354834	1220.69511	-1.2523	-0.00076562	3.9822	0.0024345	2.7298	0.0016689	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.63176	1	9788	9788		40.778	8.0276	1	16503000			30154	5201	20122	20132	34329	34329					0.09359480110538243
LLGLHPKIEMA	11	Unmodified	_LLGLHPKIEMA_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3554077148438	2	611.354834	1220.69511	1.8406	0.0011253	0.99243	0.00060673	2.833	0.001732	611.3554755611618	95.715	4.0888	96.135	95.146	99.235	0.42051					346	99	4	0	0	0	0.6921	1	11458	11458		32.812	1.2826	1	11372000			30155	5201	20122	20132	34330	34330					0.09359480110538243
LLGLKAKL	8	Unmodified	_LLGLKAKL_					0	0	0		ENST00000548978.2_1_2:74730517-74730878:+|nuORF	ENST00000548978.2_1_2:74730517-74730878:+|nuORF	ENST00000548978.2_1_2:74730517-74730878:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.26153564453125	2	428.304939	854.595324	-1.1387	-0.00048769	-0.21258	-9.1049E-05	-1.3512	-0.00057874	428.305142129593	91.027	0.61592	91.027	90.649	91.265	0					18	14	3	0	0	0	0.4196	1	8856	8856		26.796	6.3143	1	83685			30156	13627	20123	20133	34331	34331					0.16221030558881466
LLGLKKAVY	9	Unmodified	_LLGLKKAVY_					0	0	0			REV__ENST00000376899.8_1_11:66054976-66056456:-|nuORF	REV__ENST00000376899.8_1_11:66054976-66056456:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8139953613281	2	502.828778	1003.643	2.304	0.0011585	-0.89774	-0.00045141	1.4063	0.00070711	502.8276850747384	97.297	0.6289	97.241	96.932	97.561	-0.055542					12	9	2	0	0	0	0.20789	1	10417	10417		35.201	15.841	1	177570	+		30157	22020	20124	20134	34332	34332					0.14132684759078984
LLGLKKLA	8	Unmodified	_LLGLKKLA_					0	0	0			REV__nc|ENSG00000182795|Q9BW04-2|SARG	REV__nc|ENSG00000182795|Q9BW04-2|SARG	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.26165771484375	2	428.304939	854.595324	0.64289	0.00027535	0.79019	0.00033844	1.4331	0.0006138	428.3047378797593	90.713	0.40061	90.867	90.555	90.956	0.15388					14	9	3	0	0	0	0.4196	1	9103	9103		14.664	0	1	69052	+		30158	22553	20125	20135	34333	34333					0.16221030558892835
LLGLKKTRYW	10	Unmodified	_LLGLKKTRYW_					0	0	0			REV__nc|ENSG00000140299|Q12982-2|BNIP2	REV__nc|ENSG00000140299|Q12982-2|BNIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.5944519042969	3	426.595802	1276.76558	-0.47921	-0.00020443	-2.6333	-0.0011233	-3.1125	-0.0013278	426.5946424263707	33.571	1.0016	33.514	33.214	34.216	-0.056385					58	22	4	0	0	0	0.40664	1	2061	2061		63.534	6.9016	1	557890	+		30159	29888	20126	20136	34334	34334					0.13826521490500454
LLGLKKTRYW	10	Unmodified	_LLGLKKTRYW_					0	0	0			REV__nc|ENSG00000140299|Q12982-2|BNIP2	REV__nc|ENSG00000140299|Q12982-2|BNIP2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	426.595802	1276.76558	-1.979	-0.00084422	-0.70155	-0.00029928	-2.6805	-0.0011435	426.5958359233826	33.366	0.16446	33.366	33.223	33.388	0	-0.060447	0.0032405	NaN	63.534	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19598	+		30160	29888	20126	20136							0.13826521490500454
LLGLKKTRYW	10	Unmodified	_LLGLKKTRYW_					0	0	0			REV__nc|ENSG00000140299|Q12982-2|BNIP2	REV__nc|ENSG00000140299|Q12982-2|BNIP2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	426.595802	1276.76558	1.4588	0.00062231	-4.5172	-0.001927	-3.0585	-0.0013047	426.5938475594282	33.45	1.3653	33.448	33.012	34.377	-0.0016327	0.021678	-0.0016428	NaN	63.534	74	30	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	453100	+		30161	29888	20126	20136							0.13826521490500454
LLGLKPTP	8	Unmodified	_LLGLKPTP_					0	0	0		ENST00000367311.4_1_1:201434710-201435094:-|nuORF	ENST00000367311.4_1_1:201434710-201435094:-|nuORF	ENST00000367311.4_1_1:201434710-201435094:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7757873535156	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.884	1	3314	3314		33.516	1.5607	1	10965000			30162	10542	20127	20137	34335	34335					0.10712464770847419
LLGLKPTP	8	Unmodified	_LLGLKPTP_					0	0	0		ENST00000367311.4_1_1:201434710-201435094:-|nuORF	ENST00000367311.4_1_1:201434710-201435094:-|nuORF	ENST00000367311.4_1_1:201434710-201435094:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7750549316406	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.87479	2	3304	3211;3304		33.516	1.5607	1	11423000			30163	10542	20127	20137	34336;34337	34337					0.10712464770847419
LLGLKPTP	8	Unmodified	_LLGLKPTP_					0	0	0		ENST00000367311.4_1_1:201434710-201435094:-|nuORF	ENST00000367311.4_1_1:201434710-201435094:-|nuORF	ENST00000367311.4_1_1:201434710-201435094:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7749328613281	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.884	1	3327	3327		33.516	0	1	10266000			30164	10542	20127	20137	34338	34338					0.10712464770847419
LLGLKPTP	8	Unmodified	_LLGLKPTP_					0	0	0		ENST00000367311.4_1_1:201434710-201435094:-|nuORF	ENST00000367311.4_1_1:201434710-201435094:-|nuORF	ENST00000367311.4_1_1:201434710-201435094:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.77496337890625	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.884	1	2803	2803		33.516	1.5607	1	9723800			30165	10542	20127	20137	34339	34339					0.10712464770847419
LLGLKVVGG	9	Unmodified	_LLGLKVVGG_					0	0	0		nc|ENSG00000079841|Q86UR5-12|RIMS1;nc|ENSG00000079841|Q86UR5-3|RIMS1;nc|ENSG00000079841|Q86UR5-4|RIMS1;ENSG00000079841|ENST00000521978|RIMS1;ENST00000524197.1_1_6:72926891-72975792:+|nuORF;nc|ENSG00000079841|Q86UR5-10|RIMS1;nc|ENSG00000079841|Q86UR5-13|RIMS1;nc|ENSG00000079841|Q86UR5-9|RIMS1;nc|ENSG00000079841|Q86UR5-2|RIMS1;nc|ENSG00000079841|Q86UR5-8|RIMS1;nc|ENSG00000079841|Q86UR5-7|RIMS1;nc|ENSG00000079841|Q86UR5-6|RIMS1;nc|ENSG00000079841|Q86UR5-5|RIMS1	nc|ENSG00000079841|Q86UR5-12|RIMS1	nc|ENSG00000079841|Q86UR5-12|RIMS1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.26153564453125	2	428.286746	854.558939	-1.1398	-0.00048816	-3.1124	-0.001333	-4.2522	-0.0018212	428.2854335461838	90.923	0.12476	90.923	90.819	90.944	0					4	2	2	0	0	0	0.20789	1	8856	8856		33.516	1.5607	1	50336			30166	1430	20128	20138	34340	34340					0.12584153662191966
LLGLKVVGG	9	Unmodified	_LLGLKVVGG_					0	0	0		nc|ENSG00000079841|Q86UR5-12|RIMS1;nc|ENSG00000079841|Q86UR5-3|RIMS1;nc|ENSG00000079841|Q86UR5-4|RIMS1;ENSG00000079841|ENST00000521978|RIMS1;ENST00000524197.1_1_6:72926891-72975792:+|nuORF;nc|ENSG00000079841|Q86UR5-10|RIMS1;nc|ENSG00000079841|Q86UR5-13|RIMS1;nc|ENSG00000079841|Q86UR5-9|RIMS1;nc|ENSG00000079841|Q86UR5-2|RIMS1;nc|ENSG00000079841|Q86UR5-8|RIMS1;nc|ENSG00000079841|Q86UR5-7|RIMS1;nc|ENSG00000079841|Q86UR5-6|RIMS1;nc|ENSG00000079841|Q86UR5-5|RIMS1	nc|ENSG00000079841|Q86UR5-12|RIMS1	nc|ENSG00000079841|Q86UR5-12|RIMS1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.26153564453125	2	428.286746	854.558939	-1.1382	-0.00048748	2.6526	0.0011361	1.5144	0.00064861	428.28792380213287	91.045	0.44864	91.045	90.777	91.225	0					18	10	3	0	0	0	0.20789	1	8856	8856		33.516	1.5607	1	254990			30167	1430	20128	20138	34341	34341					0.12584153662191966
LLGLKVVGG	9	Unmodified	_LLGLKVVGG_					0	0	0		nc|ENSG00000079841|Q86UR5-12|RIMS1;nc|ENSG00000079841|Q86UR5-3|RIMS1;nc|ENSG00000079841|Q86UR5-4|RIMS1;ENSG00000079841|ENST00000521978|RIMS1;ENST00000524197.1_1_6:72926891-72975792:+|nuORF;nc|ENSG00000079841|Q86UR5-10|RIMS1;nc|ENSG00000079841|Q86UR5-13|RIMS1;nc|ENSG00000079841|Q86UR5-9|RIMS1;nc|ENSG00000079841|Q86UR5-2|RIMS1;nc|ENSG00000079841|Q86UR5-8|RIMS1;nc|ENSG00000079841|Q86UR5-7|RIMS1;nc|ENSG00000079841|Q86UR5-6|RIMS1;nc|ENSG00000079841|Q86UR5-5|RIMS1	nc|ENSG00000079841|Q86UR5-12|RIMS1	nc|ENSG00000079841|Q86UR5-12|RIMS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.26153564453125	2	428.286746	854.558939	1.4019	0.00060043	3.901	0.0016707	5.303	0.0022712	428.2881548619786	90.797	0.15733	90.73	90.643	90.8	-0.067085					9	3	3	0	0	0	0.20789	1	9532	9532		26.796	7.4361	1	159050			30168	1430	20128	20138	34342	34342					0.12584153662191966
LLGLKVVGG	9	Unmodified	_LLGLKVVGG_					0	0	0		nc|ENSG00000079841|Q86UR5-12|RIMS1;nc|ENSG00000079841|Q86UR5-3|RIMS1;nc|ENSG00000079841|Q86UR5-4|RIMS1;ENSG00000079841|ENST00000521978|RIMS1;ENST00000524197.1_1_6:72926891-72975792:+|nuORF;nc|ENSG00000079841|Q86UR5-10|RIMS1;nc|ENSG00000079841|Q86UR5-13|RIMS1;nc|ENSG00000079841|Q86UR5-9|RIMS1;nc|ENSG00000079841|Q86UR5-2|RIMS1;nc|ENSG00000079841|Q86UR5-8|RIMS1;nc|ENSG00000079841|Q86UR5-7|RIMS1;nc|ENSG00000079841|Q86UR5-6|RIMS1;nc|ENSG00000079841|Q86UR5-5|RIMS1	nc|ENSG00000079841|Q86UR5-12|RIMS1	nc|ENSG00000079841|Q86UR5-12|RIMS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	428.286746	854.558939	-0.17861	-7.6495E-05	7.8288	0.003353	7.6502	0.0032765	428.2922428466839	90.935	0.59767	91.004	90.598	91.195	0.069328	-0.02064	0.00083612	NaN	33.516	25	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153140			30169	1430	20128	20138							0.12584153662191966
LLGLLASLSA	10	Unmodified	_LLGLLASLSA_					0	0	0		ENST00000379619.5_1_2:28638002-28638248:+|nuORF	ENST00000379619.5_1_2:28638002-28638248:+|nuORF	ENST00000379619.5_1_2:28638002-28638248:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773742675781	2	479.302593	956.590633	-0.83048	-0.00039805	3.0048	0.0014402	2.1743	0.0010421	479.30403620789406	83.756	0.13158	83.815	83.717	83.849	0.05925					4	2	2	0	0	0	0.37624	1	8435	8435		27.882	20.689	1	22634			30170	10899	20129	20139	34343	34343					0.11060101625457719
LLGLLEEL	8	Unmodified	_LLGLLEEL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2740173339844	2	450.276044	898.537535	-0.14122	-6.3587E-05	-3.5809	-0.0016124	-3.7221	-0.001676	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.87276	1	9881	9881		29.842	0	1	47650000			30171	7990	20130	20140	34344	34344					0.08420723842812095
LLGLLEEL	8	Unmodified	_LLGLLEEL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.27557373046875	2	450.276044	898.537535	-1.2506	-0.00056311	-2.4536	-0.0011048	-3.7041	-0.0016679	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.82464	1	9570	9570		21.702	0.7554	1	44812000			30172	7990	20130	20140	34345	34345					0.08420723842812095
LLGLLEEL	8	Unmodified	_LLGLLEEL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2745361328125	2	450.276044	898.537535	-1.7763	-0.00079984	-1.8855	-0.00084901	-3.6619	-0.0016489	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.87276	1	9586	9586		29.842	1.5873	1	35178000			30173	7990	20130	20140	34346	34346					0.08420723842812095
LLGLLEEL	8	Unmodified	_LLGLLEEL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.27435302734375	2	450.276044	898.537535	-0.39172	-0.00017638	-2.9008	-0.0013062	-3.2926	-0.0014826	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.87276	1	11085	11085		29.842	0	1	19085000			30174	7990	20130	20140	34347	34347					0.08420723842812095
LLGLLFQYLRL	11	Unmodified	_LLGLLFQYLRL_					0	0	0			REV__nc|ENSG00000269404|Q01892-3|SPIB	REV__nc|ENSG00000269404|Q01892-3|SPIB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.7571716308594	3	450.283224	1347.82784	0.10308	4.6417E-05	0.49359	0.00022226	0.59668	0.00026867	450.2832410225196	52.276	0.8278	52.943	52.715	53.543	0.66729					46	19	3	0	0	0	0.18028	1	5218	5218		14.694	4.5898	1	335610	+		30175	23974	20131	20141	34348	34348					0.16784247838836563
LLGLLFQYLRL	11	Unmodified	_LLGLLFQYLRL_					0	0	0			REV__nc|ENSG00000269404|Q01892-3|SPIB	REV__nc|ENSG00000269404|Q01892-3|SPIB	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	450.283224	1347.82784	-0.86731	-0.00039054	1.2491	0.00056243	0.38175	0.00017189	450.2838184772003	52.705	0.95024	53.128	52.723	53.673	0.42348	0.092613	0.00053318	NaN	14.694	44	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	305830	+		30176	23974	20131	20141							0.16784247838836563
LLGLLGAAAL	10	Unmodified	_LLGLLGAAAL_					0	0	0		ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3013000488281	2	456.299853	910.585153	-1.821	-0.00083093	3.591	0.0016386	1.77	0.00080766	456.3013684368404	43.078	1.5972	43.078	42.644	44.241	0					105	38	3	0	0	0	0.85976	1	3050	3050		35.201	0	1	1086200			30177	8186	20132	20142	34349	34349					0.1262842283365444
LLGLLGAAAL	10	Unmodified	_LLGLLGAAAL_					0	0	0		ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3016357421875	2	456.299853	910.585153	-1.7707	-0.00080797	4.1491	0.0018932	2.3784	0.0010852	456.3016315256623	46.489	1.398	46.489	46.06	47.458	0					92	40	3	0	0	0	0.70264	1	3476	3476		44.531	0	1	435240			30178	8186	20132	20142	34350	34350					0.1262842283365444
LLGLLGAAAL	10	Unmodified	_LLGLLGAAAL_					0	0	0		ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3023681640625	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.85976	1	2070	2070		35.201	1.7077	1	1057300			30179	8186	20132	20142	34351	34351					0.1262842283365444
LLGLLGAAAL	10	Unmodified	_LLGLLGAAAL_					0	0	0		ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3007507324219	2	456.299853	910.585153	0.11809	5.3885E-05	2.2455	0.0010246	2.3636	0.0010785	456.3007564830729	46.759	1.8735	46.745	45.791	47.665	-0.013821					101	50	3	0	0	0	0.70264	1	3775	3775		44.531	9.3304	1	299420			30180	8186	20132	20142	34352	34352					0.1262842283365444
LLGLLGAAAL	10	Unmodified	_LLGLLGAAAL_					0	0	0		ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30120849609375	2	456.299853	910.585153	-0.16313	-7.4434E-05	2.0671	0.00094322	1.904	0.00086878	456.30063437425633	43.131	1.7393	43.081	42.268	44.008	-0.050308					99	45	4	0	0	0	0.86786	1	2938	2938		26.796	0	1	855890			30181	8186	20132	20142	34353	34353					0.1262842283365444
LLGLLGAAAL	10	Unmodified	_LLGLLGAAAL_					0	0	0		ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	456.299853	910.585153	-1.3486	-0.00061536	3.6001	0.0016427	2.2515	0.0010274	456.3014130901415	45.925	1.4172	46.397	45.521	46.938	0.47139	-0.12617	0.00045546	NaN	44.531	56	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	675260			30182	8186	20132	20142							0.1262842283365444
LLGLLGAAAL	10	Unmodified	_LLGLLGAAAL_					0	0	0		ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	456.299853	910.585153	-0.69351	-0.00031645	2.881	0.0013146	2.1875	0.00099817	456.3010354591952	45.578	1.2819	46.473	45.964	47.246	0.89542	-0.049367	-0.00020079	NaN	44.531	59	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	703610			30183	8186	20132	20142							0.1262842283365444
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852783203125	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.86288	1	1799	1799		26.796	0	1	1606100	+		30184	23067	20133	20143	34354	34354					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78533935546875	2	406.783839	811.553125	-0.045049	-1.8325E-05	3.807	0.0015486	3.7619	0.0015303	406.78524079935227	33.287	0.97472	33.291	32.894	33.869	0.0030785					79	22	4	0	0	0	0.82464	1	1955	1955		21.702	0	1	346170	+		30185	23067	20133	20143	34355	34355					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78521728515625	2	406.783839	811.553125	-0.12701	-5.1665E-05	4.0102	0.0016313	3.8832	0.0015796	406.7853480704683	34.439	1.4356	34.434	33.818	35.254	-0.0047417					125	35	4	0	0	0	0.82419	3	2124	2124;2153;2176		37.028	0	1	1552500	+		30186	23067	20133	20143	34356;34357;34358	34356					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852478027344	2	406.783839	811.553125	-0.12228	-4.9742E-05	4.0703	0.0016557	3.948	0.001606	406.7853695051589	35.638	4.6571	35.626	35.208	39.865	-0.012199					169	106	4	0	0	0	0.81548	2	2211	2211;2259		20.482	0	1	683900	+		30187	23067	20133	20143	34359;34360	34359					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7851867675781	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.81548	1	1946	1946		20.482	0	1	1953100	+		30188	23067	20133	20143	34361	34361					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7851867675781	2	406.783839	811.553125	-0.45573	-0.00018539	4.0823	0.0016606	3.6266	0.0014752	406.7853476026277	33.431	0.94502	33.374	32.967	33.912	-0.056385					79	22	4	0	0	0	0.87276	1	2054	2054		29.842	8.1392	1	606440	+		30189	23067	20133	20143	34362	34362					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852478027344	2	406.783839	811.553125	1.9606	0.00079753	1.7235	0.0007011	3.6841	0.0014986	406.7843974234306	33.155	0.95889	33.153	32.87	33.829	-0.0016365					72	22	4	0	0	0	0.81548	2	1959	1922;1959		20.482	0	1	517740	+		30190	23067	20133	20143	34363;34364	34364					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852783203125	2	406.783839	811.553125	1.6742	0.00068103	2.1022	0.00085513	3.7764	0.0015362	406.78458476785784	34.278	1.4525	34.281	33.794	35.247	0.0026054					117	34	4	0	0	0	0.82419	2	2120	2120;2140		35.201	0	1	2275400	+		30191	23067	20133	20143	34365;34366	34365					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7851867675781	2	406.783839	811.553125	1.2307	0.00050062	2.609	0.0010613	3.8397	0.0015619	406.7847800610387	35.56	4.0123	35.569	35.212	39.224	0.0092812					187	90	4	0	0	0	0.81548	1	2223	2223		20.482	1.1219	1	403450	+		30192	23067	20133	20143	34367	34367					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78509521484375	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.81724	1	1808	1808		14.664	0	1	1756100	+		30193	23067	20133	20143	34368	34368					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7846374511719	2	406.783839	811.553125	0.14551	5.919E-05	3.7654	0.0015317	3.9109	0.0015909	406.78526707420434	35.3	1.357	35.406	35.11	36.467	0.10603					95	43	3	0	0	0	0.86288	1	1825	1825		26.796	0	1	399180	+		30194	23067	20133	20143	34369	34369					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852478027344	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.119	1	32.23	31.73	32.73	0.11117								0	0	0	0.30125	1	1496	1496		20.482	0	1		+		30195	23067	20133	20143	34370	34370					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7851867675781	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.484	1	32.595	32.095	33.095	0.11117								0	0	0	0.30125	1	1528	1528		20.482	0	1		+		30196	23067	20133	20143	34371	34371					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2573547363281	2	406.783839	811.553125	0.18118	7.3701E-05	3.5824	0.0014572	3.7635	0.0015309	406.7852014348612	39.21	1.0576	39.298	39.111	40.168	0.088375					31	27	2	0	0	0	0.4196	1	2414	2414		20.482	6.7065	1	32830	+		30197	23067	20133	20143	34372	34372					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7853088378906	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.81548	1	1518	1518		20.482	0	1	1817700	+		30198	23067	20133	20143	34373	34373					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78521728515625	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.82419	2	1725	1725;1766		13.775	0	1	1879900	+		30199	23067	20133	20143	34374;34375	34374					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7852478027344	2	406.783839	811.553125	1.1655	0.00047412	2.3762	0.00096659	3.5417	0.0014407	406.7846691604622	32.902	0.76672	33.072	32.59	33.356	0.16971					56	17	4	0	0	0	0.82464	2	2318	2318;2342		21.702	0	1	1453200	+		30200	23067	20133	20143	34376;34377	34376					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7853698730469	2	406.783839	811.553125	1.6031	0.00065213	2.1137	0.0008598	3.7168	0.0015119	406.78457300863613	33.544	1.5003	33.714	33.314	34.814	0.16971					120	35	4	0	0	0	0.81548	2	2401	2401;2438		28.254	0	1	8051400	+		30201	23067	20133	20143	34378;34379	34378					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78485107421875	2	406.783839	811.553125	0.34779	0.00014148	3.2583	0.0013254	3.6061	0.0014669	406.7850428339316	31.533	1.6322	31.64	30.856	32.488	0.10707					116	37	4	0	0	0	0.81548	1	2259	2259		20.482	0	1	5012000	+		30202	23067	20133	20143	34380	34380					0.1398105515052066
LLGLLGKV	8	Unmodified	_LLGLLGKV_					0	0	0			REV__ENSG00000189129|ENST00000372263|PLAC9	REV__ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7850341796875	2	406.783839	811.553125	0.72345	0.00029429	2.8619	0.0011642	3.5854	0.0014585	406.7848598488789	32.675	0.80478	32.887	32.55	33.355	0.21168					52	18	3	0	0	0	0.81548	1	2375	2375		20.482	0	1	1157900	+		30203	23067	20133	20143	34381	34381					0.1398105515052066
LLGLLGPAA	9	Unmodified	_LLGLLGPAA_					0	0	0		ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7666320800781	2	412.765646	823.516739	0.16799	6.9342E-05	0.85459	0.00035274	1.0226	0.00042209	412.76662969775504	43.906	2.0769	43.88	42.796	44.873	-0.026764					88	48	2	0	0	0	0.7932	1	3397	3397		21.702	1.2205	1	305480			30204	6756	20134	20144	34382	34382					0.0979217825380374
LLGLLGPAA	9	Unmodified	_LLGLLGPAA_					0	0	0		ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7666931152344	2	412.765646	823.516739	-1.2234	-0.00050499	3.8954	0.0016079	2.6719	0.0011029	412.7673243915212	41.944	1.8566	41.905	41.33	43.186	-0.038223					75	44	2	0	0	0	0.7932	1	3238	3238		21.702	0	1	796850			30205	6756	20134	20144	34383	34383					0.0979217825380374
LLGLLGPAA	9	Unmodified	_LLGLLGPAA_					0	0	0		ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7667541503906	2	412.765646	823.516739	1.4126	0.00058306	1.8694	0.00077163	3.282	0.0013547	412.7662658707051	42.038	1.4358	42.042	41.461	42.897	0.003418					59	34	2	0	0	0	0.78292	1	3175	3175		29.842	0	1	683700			30206	6756	20134	20144	34384	34384					0.0979217825380374
LLGLLGPAA	9	Unmodified	_LLGLLGPAA_					0	0	0		ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7666931152344	2	412.765646	823.516739	0.2674	0.00011037	3.4179	0.0014108	3.6853	0.0015212	412.76694459903433	48.848	3.1893	48.886	47.742	50.932	0.037731					149	88	4	0	0	0	0.78292	1	3740	3740		29.842	0	1	734040			30207	6756	20134	20144	34385	34385					0.0979217825380374
LLGLLGPAA	9	Unmodified	_LLGLLGPAA_					0	0	0		ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7665100097656	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.131	1	37.231	36.731	37.731	0.099277								0	0	0	0.32542	1	2106	2106		21.702	6.0661	1				30208	6756	20134	20144	34386	34386					0.0979217825380374
LLGLLGPAA	9	Unmodified	_LLGLLGPAA_					0	0	0		ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76690673828125	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.78292	1	2783	2783		29.842	0	1	818920			30209	6756	20134	20144	34387	34387					0.0979217825380374
LLGLLGPAA	9	Unmodified	_LLGLLGPAA_					0	0	0		ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2690734863281	2	412.765646	823.516739	-0.62558	-0.00025822	2.0435	0.0008435	1.4179	0.00058528	412.7673203899957	51.451	2.0511	51.366	50.837	52.888	-0.084538					105	61	2	0	0	0	0.78292	1	4084	4084		29.842	8.1392	1	311840			30210	6756	20134	20144	34388	34388					0.0979217825380374
LLGLLGPAA	9	Unmodified	_LLGLLGPAA_					0	0	0		ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7670593261719	2	412.765646	823.516739	1.2585	0.00051947	2.4286	0.0010024	3.6871	0.0015219	412.7665201070099	37.01	2.3211	37.292	35.703	38.024	0.28173					152	57	4	0	0	0	0.7932	1	2857	2857		21.702	0	1	3102100			30211	6756	20134	20144	34389	34389					0.0979217825380374
LLGLLGPAA	9	Unmodified	_LLGLLGPAA_					0	0	0		ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	ENSG00000172247|ENST00000302514|C1QTNF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7668762207031	2	412.765646	823.516739	1.2488	0.00051545	2.3587	0.00097359	3.6075	0.001489	412.7664969922496	36.891	1.9427	37.376	36.231	38.174	0.48581					136	47	4	0	0	0	0.7932	1	2852	2852		21.702	0	1	3061300			30212	6756	20134	20144	34390	34390					0.0979217825380374
LLGLLGPGMS	10	Unmodified	_LLGLLGPGMS_					0	0	0			REV__ENST00000581150.6_1_19:2271460-2271610:+|nuORF	REV__ENST00000581150.6_1_19:2271460-2271610:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27752685546875	2	479.275521	956.536489	-0.098244	-4.7086E-05	4.0257	0.0019294	3.9274	0.0018823	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.86589	1	8303	8303		29.15	0.89528	1	6799600	+		30213	29044	20135	20145	34391	34391					0.0564818620226788
LLGLLLAAAG	10	Unmodified	_LLGLLLAAAG_					0	0	0		ENSG00000198786|ENST00000361567|MT-ND5;ENSG00000183579|ENST00000544604|ZNRF3	ENSG00000198786|ENST00000361567|MT-ND5;ENSG00000183579|ENST00000544604|ZNRF3	ENSG00000198786|ENST00000361567|MT-ND5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3016052246094	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.85976	1	2090	2090		35.201	3.2459	1	1220600			30214	8332;7542	20136	20146	34392	34392					0.1262842283365444
LLGLLLAAAG	10	Unmodified	_LLGLLLAAAG_					0	0	0		ENSG00000198786|ENST00000361567|MT-ND5;ENSG00000183579|ENST00000544604|ZNRF3	ENSG00000198786|ENST00000361567|MT-ND5;ENSG00000183579|ENST00000544604|ZNRF3	ENSG00000198786|ENST00000361567|MT-ND5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30120849609375	2	456.299853	910.585153	-0.34519	-0.00015751	3.1038	0.0014163	2.7586	0.0012588	456.30112978669194	48.146	1.4143	48.053	47.615	49.029	-0.093178					75	35	3	0	0	0	0.85976	1	3698	3698		35.201	0	1	317120			30215	8332;7542	20136	20146	34393	34393					0.1262842283365444
LLGLLLGSA	9	Unmodified	_LLGLLLGSA_					0	0	0		ENSG00000161682|ENST00000293443|FAM171A2;ENST00000592560.1_1_17:42436899-42441082:-|nuORF	ENSG00000161682|ENST00000293443|FAM171A2	ENSG00000161682|ENST00000293443|FAM171A2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.26141357421875	2	428.778754	855.542954	2.6167	0.001122	-1.1375	-0.00048773	1.4792	0.00063426	428.77863846770583	90.566	0.24099	90.612	90.432	90.673	0.04644					7	5	2	0	0	0	0.20789	1	9377	9377		18.324	0	1	212280			30216	5651	20137	20147	34394	34394					0.10940447425286948
LLGLLPDIIL	10	Unmodified	_LLGLLPDIIL_					0	0	0			REV__nc|ENSG00000143341|Q96RW7-2|HMCN1;REV__ENST00000493413.1_1_1:185934944-185947193:+|nuORF	REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.3599243164062	2	540.357368	1078.70018	-0.017297	-9.3466E-06	2.5708	0.0013891	2.5535	0.0013798	540.3585627881598	36.881	1.2861	36.905	36.409	37.695	0.023624					76	34	3	0	0	0	0.86201	1	2080	2080		24.203	0	1	515190	+		30217	19793;27692	20138	20148	34395	34395					0.16398107244822313
LLGLLPTLS	9	Unmodified	_LLGLLPTLS_					0	0	0			REV__ENSG00000198786|ENST00000361567|MT-ND5	REV__ENSG00000198786|ENST00000361567|MT-ND5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8001403808594	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.77546	1	3532	3532		31.955	0	1	1294000	+		30218	23381	20139	20149	34396	34396					0.11905003113804469
LLGLLWAKY	9	Unmodified	_LLGLLWAKY_					0	0	0			REV__ENSG00000124713|ENST00000372808|GNMT	REV__ENSG00000124713|ENST00000372808|GNMT	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.8281860351562	2	538.828778	1075.643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.57	1	113.6	113.1	114.1	0.027321								0	0	0	0.32894	1	12413	12413		20.482	3.1169	1		+		30219	18605	20140	20150	34397	34397					0.10820684759096366
LLGLLYTRNPN	11	Unmodified	_LLGLLYTRNPN_					0	0	0			REV__ENST00000480023.1_1_9:132591268-132591846:-|nuORF	REV__ENST00000480023.1_1_9:132591268-132591846:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.3685913085938	2	637.366787	1272.71902	1.5361	0.00097909	4.3223	0.0027549	5.8584	0.003734	637.3694440717433	105.45	2.1927	105.61	104.92	107.11	0.15924					169	54	4	0	0	0	0.72106	1	11282	11282		28.081	1.3886	1	2533600	+		30220	27035	20141	20151	34398	34398					0.09357036868573232
LLGLMPLLRLG	11	Unmodified	_LLGLMPLLRLG_					0	0	0			REV__ENSG00000148358|ENST00000347136|GPR107	REV__ENSG00000148358|ENST00000347136|GPR107	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.3815307617188	2	598.383394	1194.75224	-0.74115	-0.00044349	-2.6536	-0.0015879	-3.3948	-0.0020314	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.67493	1	3101	3101		35.618	4.0885	1	772980	+		30221	20113	20142	20152	34399	34399					0.16264947386889617
LLGLMPLLRLG	11	Unmodified	_LLGLMPLLRLG_					0	0	0			REV__ENSG00000148358|ENST00000347136|GPR107	REV__ENSG00000148358|ENST00000347136|GPR107	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3778076171875	2	598.383394	1194.75224	-1.5818	-0.00094655	-2.2728	-0.00136	-3.8547	-0.0023066	598.381910376305	40.152	1.105	40.741	40.044	41.149	0.58915					94	27	5	0	0	0	0.60283	1	3454	3454		44.117	3.3386	1	9102300	+		30222	20113	20142	20152	34400	34400					0.16264947386889617
LLGLMPLLRLG	11	Unmodified	_LLGLMPLLRLG_					0	0	0			REV__ENSG00000148358|ENST00000347136|GPR107	REV__ENSG00000148358|ENST00000347136|GPR107	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.380859375	2	598.383394	1194.75224	-1.6771	-0.0010036	-0.95661	-0.00057242	-2.6337	-0.001576	598.3826958044465	40.727	0.40505	41.317	41.083	41.488	0.58915					37	11	4	0	0	0	0.71452	1	3539	3539		29.15	2.4566	1	4146200	+		30223	20113	20142	20152	34401	34401					0.16264947386889617
LLGLPADRPLL	11	Unmodified	_LLGLPADRPLL_					0	0	0		ENST00000366592.7_2_1:236306173-236341839:+|nuORF	ENST00000366592.7_2_1:236306173-236341839:+|nuORF	ENST00000366592.7_2_1:236306173-236341839:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3427124023438	2	589.368798	1176.72304	-0.64936	-0.00038271	-3.8776	-0.0022853	-4.5269	-0.002668	589.3662538633254	93.847	0.25819	93.892	93.665	93.923	0.045448					11	5	3	0	0	0	0.17472	1	9839	9839		12.812	5.1214	1	103710			30224	10512	20143	20153	34402	34402					0.14175126362283663
LLGLPGNK	8	Unmodified	_LLGLPGNK_					0	0	0			REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25714111328125	2	406.255446	810.496338	0.016868	6.8526E-06	3.7223	0.0015122	3.7391	0.001519	406.25685626914105	33.24	0.97973	33.208	32.974	33.953	-0.032677					91	43	3	0	0	0	0.86791	1	1609	1609		28.254	0	1	414640	+		30225	25748	20144	20154	34403	34403					0.08351007593989834
LLGLPGNK	8	Unmodified	_LLGLPGNK_					0	0	0			REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2566223144531	2	406.255446	810.496338	0.46183	0.00018762	2.5082	0.001019	2.97	0.0012066	406.2563382907766	44.368	1.8269	44.818	44.12	45.947	0.45025					92	44	3	0	0	0	0.81548	1	4061	4061		20.482	1.1219	1	1230900	+		30226	25748	20144	20154	34404	34404					0.08351007593989834
LLGLPGNK	8	Unmodified	_LLGLPGNK_					0	0	0			REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	406.255446	810.496338	0.1348	5.4762E-05	3.0834	0.0012526	3.2182	0.0013074	406.25659837749214	44.599	1.7606	44.576	43.978	45.739	-0.023079	-0.238	9.4031E-05	NaN	20.482	89	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200440	+		30227	25748	20144	20154							0.08351007593989834
LLGLPGNK	8	Unmodified	_LLGLPGNK_					0	0	0			REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.255446	810.496338	-1.0313	-0.00041897	3.9706	0.0016131	2.9393	0.0011941	406.25697754099514	44.661	1.6305	44.627	43.991	45.622	-0.033474	-0.18629	0.00081495	NaN	20.482	83	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	175730	+		30228	25748	20144	20154							0.08351007593989834
LLGLPGNK	8	Unmodified	_LLGLPGNK_					0	0	0			REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.255446	810.496338	1.8962	0.00077034	1.1092	0.00045064	3.0054	0.001221	406.2558356519817	44.757	1.4048	44.753	44.085	45.49	-0.0041618	-0.061106	-0.00151	NaN	20.482	71	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156890	+		30229	25748	20144	20154							0.08351007593989834
LLGLPGNK	8	Unmodified	_LLGLPGNK_					0	0	0			REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	406.255446	810.496338	0.23179	9.4166E-05	2.9498	0.0011984	3.1816	0.0012925	406.25655804195657	44.922	0.9583	44.971	44.571	45.53	0.048996	0.157	-1.4476E-05	NaN	20.482	38	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186680	+		30230	25748	20144	20154							0.08351007593989834
LLGLPGNK	8	Unmodified	_LLGLPGNK_					0	0	0			REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	406.255446	810.496338	0.46183	0.00018762	2.5082	0.001019	2.97	0.0012066	406.2563382907766	44.368	1.8269	44.818	44.12	45.947	0.45025	0.0041744	-0.00037333	NaN	20.482	92	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1230900	+		30231	25748	20144	20154							0.08351007593989834
LLGLPGNK	8	Unmodified	_LLGLPGNK_					0	0	0			REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	REV__ENST00000373115.4_1_10:73770493-73770862:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	406.255446	810.496338	-1.4166	-0.00057551	4.2472	0.0017255	2.8306	0.0011499	406.2570241315947	44.294	2.3011	45.138	43.653	45.954	0.84438	0.32422	0.0010397	NaN	20.482	100	56	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1167500	+		30232	25748	20144	20154							0.08351007593989834
LLGLPLTGV	9	Unmodified	_LLGLPLTGV_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78753662109375	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.49378	4	3109	3109;3157;3169;3222		52.299	9.8247	1	12471000	+		30233	21676	20145	20155	34405;34406;34407;34408	34405					0.11308733942325944
LLGLPLTGV	9	Unmodified	_LLGLPLTGV_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78765869140625	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.67235	2	3137	3137;3186		42.474	0	1	12523000	+		30234	21676	20145	20155	34409;34410	34409					0.11308733942325944
LLGLPLTGV	9	Unmodified	_LLGLPLTGV_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7873840332031	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.64338	1	2677	2677		44.531	0	1	10128000	+		30235	21676	20145	20155	34411	34411					0.11308733942325944
LLGLPLTGV	9	Unmodified	_LLGLPLTGV_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7880859375	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	1	2530	2530		20.482	0	1	11532000	+		30236	21676	20145	20155	34412	34412					0.11308733942325944
LLGLPLTGV	9	Unmodified	_LLGLPLTGV_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7869873046875	2	441.786579	881.558604	-2.6056	-0.0011511	3.8386	0.0016959	1.233	0.00054472	441.7881605091801	40.922	2.2099	41.314	40.796	43.006	0.39209					179	59	5	0	0	0	0.49378	5	3584	3523;3535;3572;3584;3597		52.299	0	1	185320000	+		30237	21676	20145	20155	34413;34414;34415;34416;34417	34416					0.11308733942325944
LLGLPLTGV	9	Unmodified	_LLGLPLTGV_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7879943847656	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.7932	1	3103	3103		25.45	0	1	54520000	+		30238	21676	20145	20155	34418	34418					0.11308733942325944
LLGLPLTGV	9	Unmodified	_LLGLPLTGV_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7869567871094	2	441.786579	881.558604	-1.3207	-0.00058348	2.7134	0.0011988	1.3927	0.00061528	441.78767453164585	40.807	2.1151	41.396	40.908	43.023	0.58915					198	57	5	0	0	0	0.67235	3	3530	3530;3566;3592		42.474	0	1	200250000	+		30239	21676	20145	20155	34419;34420;34421	34419					0.11308733942325944
LLGLPPNGLLL	11	Unmodified	_LLGLPPNGLLL_					0	0	0		nc|ENSG00000173068|Q6ZN30-2|BNC2;ENSG00000173068|ENST00000380672|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.34033203125	2	560.360442	1118.70633	-0.41208	-0.00023091	-4.1302	-0.0023144	-4.5423	-0.0025453	560.3581222969445	102.36	0.29626	102.36	102.13	102.43	0					10	7	2	0	0	0	0.1753	1	10460	10460		35.618	18.253	1	107690			30240	6822	20146	20156	34422	34422					0.15172625476338908
LLGLPPNGLLL	11	Unmodified	_LLGLPPNGLLL_					0	0	0		nc|ENSG00000173068|Q6ZN30-2|BNC2;ENSG00000173068|ENST00000380672|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3403930664062	2	560.360442	1118.70633	-0.40441	-0.00022661	2.3223	0.0013013	1.9179	0.0010747	560.3618637735841	102.88	0.16756	102.88	102.75	102.91	0					5	3	2	0	0	0	0.17404	1	10519	10519		27.882	8.5223	1	61541			30241	6822	20146	20156	34423	34423					0.15172625476338908
LLGLPPNGLLL	11	Unmodified	_LLGLPPNGLLL_					0	0	0		nc|ENSG00000173068|Q6ZN30-2|BNC2;ENSG00000173068|ENST00000380672|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.34033203125	2	560.360442	1118.70633	1.3855	0.00077638	-1.9794	-0.0011092	-0.59389	-0.00033279	560.3572152054355	102.5	0.46044	102.54	102.41	102.88	0.043198					13	10	2	0	0	0	0.1753	1	11072	11072		35.618	19.976	1	115560			30242	6822	20146	20156	34424	34424					0.15172625476338908
LLGLPPNGLLL	11	Unmodified	_LLGLPPNGLLL_					0	0	0		nc|ENSG00000173068|Q6ZN30-2|BNC2;ENSG00000173068|ENST00000380672|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3404541015625	2	560.360442	1118.70633	2.8762	0.0016117	0.92198	0.00051664	3.7981	0.0021283	560.3603412864331	102.03	0.2542	102.35	102.24	102.5	0.32511					6	5	2	0	0	0	0.17529	1	12431	12431		26.693	11.828	1	71868			30243	6822	20146	20156	34425	34425					0.15172625476338908
LLGLPSGVL	9	Unmodified	_LLGLPSGVL_					0	0	0		ENST00000462417.1_1_3:77366333-77366669:-|nuORF	ENST00000462417.1_1_3:77366333-77366669:-|nuORF	ENST00000462417.1_1_3:77366333-77366669:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77972412109375	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.855	1	57.841	57.341	58.341	-0.013641								0	0	0	0.29299	1	5245	5245		33.516	6.7195	1				30244	12041	20147	20157	34426	34426					0.10388447425293634
LLGLPSGVL	9	Unmodified	_LLGLPSGVL_					0	0	0		ENST00000462417.1_1_3:77366333-77366669:-|nuORF	ENST00000462417.1_1_3:77366333-77366669:-|nuORF	ENST00000462417.1_1_3:77366333-77366669:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7784729003906	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.7932	1	1889	1889		19.36	0	1	2251100			30245	12041	20147	20157	34427	34427					0.10388447425293634
LLGLPSGVL	9	Unmodified	_LLGLPSGVL_					0	0	0		ENST00000462417.1_1_3:77366333-77366669:-|nuORF	ENST00000462417.1_1_3:77366333-77366669:-|nuORF	ENST00000462417.1_1_3:77366333-77366669:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77935791015625	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.7932	1	3603	3603		26.796	1.3459	1	2175000			30246	12041	20147	20157	34428	34428					0.10388447425293634
LLGLPSGVL	9	Unmodified	_LLGLPSGVL_					0	0	0		ENST00000462417.1_1_3:77366333-77366669:-|nuORF	ENST00000462417.1_1_3:77366333-77366669:-|nuORF	ENST00000462417.1_1_3:77366333-77366669:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799377441406	2	434.778754	867.542954	-0.61408	-0.00026699	3.3286	0.0014472	2.7146	0.0011802	434.78015323105376	52.924	3.3917	52.849	52.471	55.862	-0.074512					147	100	2	0	0	0	0.76402	1	4429	4429		35.201	8.4046	1	526750			30247	12041	20147	20157	34429	34429					0.10388447425293634
LLGLPSGVL	9	Unmodified	_LLGLPSGVL_					0	0	0		ENST00000462417.1_1_3:77366333-77366669:-|nuORF	ENST00000462417.1_1_3:77366333-77366669:-|nuORF	ENST00000462417.1_1_3:77366333-77366669:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7784118652344	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.76402	1	3495	3495		35.201	8.4046	1	17256000			30248	12041	20147	20157	34430	34430					0.10388447425293634
LLGLPTAVV	9	Unmodified	_LLGLPTAVV_					0	0	0		ENSG00000138111|ENST00000238936|MFSD13A	ENSG00000138111|ENST00000238936|MFSD13A	ENSG00000138111|ENST00000238936|MFSD13A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7879333496094	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	1	2470	2470		19.36	1.0356	1	11532000			30249	4273	20148	20158	34431	34431					0.11308733942325944
LLGLPTAVV	9	Unmodified	_LLGLPTAVV_					0	0	0		ENSG00000138111|ENST00000238936|MFSD13A	ENSG00000138111|ENST00000238936|MFSD13A	ENSG00000138111|ENST00000238936|MFSD13A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7880554199219	2	441.786579	881.558604	-0.54459	-0.00024059	3.5319	0.0015603	2.9873	0.0013197	441.7881167581505	37.981	2.8453	38.294	37.083	39.929	0.31312					193	69	5	0	0	0	0.7932	1	3189	3189		20.482	1.1219	1	61531000			30250	4273	20148	20158	34432	34432					0.11308733942325944
LLGLPTAVV	9	Unmodified	_LLGLPTAVV_					0	0	0		ENSG00000138111|ENST00000238936|MFSD13A	ENSG00000138111|ENST00000238936|MFSD13A	ENSG00000138111|ENST00000238936|MFSD13A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7873229980469	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.7932	1	3422	3422		26.796	0	1	4170800			30251	4273	20148	20158	34433	34433					0.11308733942325944
LLGLRGPGPRQ	11	Unmodified	_LLGLRGPGPRQ_					0	0	0		ENST00000361396.6_1_13:96295902-96296766:-|nuORF	ENST00000361396.6_1_13:96295902-96296766:-|nuORF	ENST00000361396.6_1_13:96295902-96296766:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3544921875	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.75	1	113.73	113.23	114.23	-0.024689								0	0	0	0.56276	1	12590	12590		35.618	5.3006	1				30252	10475	20149	20159	34434	34434					0.11863607136797327
LLGLRGPGPRQ	11	Unmodified	_LLGLRGPGPRQ_					0	0	0		ENST00000361396.6_1_13:96295902-96296766:-|nuORF	ENST00000361396.6_1_13:96295902-96296766:-|nuORF	ENST00000361396.6_1_13:96295902-96296766:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3549194335938	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.72918	2	12391	12391;12789		26.693	1.8434	1	3937500			30253	10475	20149	20159	34435;34436	34435					0.11863607136797327
LLGLRRITKLL	11	Unmodified	_LLGLRRITKLL_					0	0	0		nc|ENSG00000137965|Q8TCB0-2|IFI44	nc|ENSG00000137965|Q8TCB0-2|IFI44	nc|ENSG00000137965|Q8TCB0-2|IFI44	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3934326171875	2	648.447914	1294.88128	-1.1411	-0.00073992	-2.7733	-0.0017984	-3.9144	-0.0025383	648.4458867779879	107.27	0.19498	107.31	107.18	107.37	0.036125					8	4	2	0	0	0	0.17472	1	11427	11427		18.262	4.808	1	185110			30254	14948	20150	20160	34437	34437					0.24563045341346879
LLGLRTFVAFA	11	Unmodified	_LLGLRTFVAFA_					0	0	0		ENSG00000175826|ENST00000574322|CTDNEP1	ENSG00000175826|ENST00000574322|CTDNEP1	ENSG00000175826|ENST00000574322|CTDNEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3665771484375	2	604.363516	1206.71248	3.2045	0.0019367	1.6316	0.00098609	4.8361	0.0029228	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.73621	1	11861	11861		10.265	0	1	63446000			30255	7039	20151	20161	34438	34438					0.11739143707859512
LLGLRTFVAFA	11	Unmodified	_LLGLRTFVAFA_					0	0	0		ENSG00000175826|ENST00000574322|CTDNEP1	ENSG00000175826|ENST00000574322|CTDNEP1	ENSG00000175826|ENST00000574322|CTDNEP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3629760742188	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.72	1	113.69	113.19	114.19	-0.024811								0	0	0	0.56276	1	12586	12586		14.137	0	1				30256	7039	20151	20161	34439	34439					0.11739143707859512
LLGLSAHPKL	10	Unmodified	_LLGLSAHPKL_					0	0	0		nc|ENSG00000179443|Q8NH95|OR13C6P;nc|ENSG00000243641|P0DN81|OR13C7	nc|ENSG00000179443|Q8NH95|OR13C6P	nc|ENSG00000179443|Q8NH95|OR13C6P	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8272705078125	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.85934	3	10018	10018;10031;10043		35.618	2.1027	1	15330000			30257	15127	20152	20162	34440;34441;34442	34440					0.12214899127980061
LLGLSAHPKL	10	Unmodified	_LLGLSAHPKL_					0	0	0		nc|ENSG00000179443|Q8NH95|OR13C6P;nc|ENSG00000243641|P0DN81|OR13C7	nc|ENSG00000179443|Q8NH95|OR13C6P	nc|ENSG00000179443|Q8NH95|OR13C6P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.826904296875	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.85934	3	10207	10207;10231;10387		35.618	5.1146	1	23918000			30258	15127	20152	20162	34443;34444;34445	34443					0.12214899127980061
LLGLSIGVP	9	Unmodified	_LLGLSIGVP_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7784423828125	2	434.778754	867.542954	-1.3516	-0.00058764	3.9223	0.0017053	2.5707	0.0011177	434.78034506978366	39.667	1.8641	39.623	39.121	40.985	-0.043697					176	46	5	0	0	0	0.76402	2	3047	3009;3047		35.201	1.6851	1	3943300	+		30259	18720	20153	20163	34446;34447	34447					0.10388447425293634
LLGLSIGVP	9	Unmodified	_LLGLSIGVP_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7793273925781	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.7932	1	3754	3754		19.36	0	1	2468400	+		30260	18720	20153	20163	34448	34448					0.10388447425293634
LLGLSIGVP	9	Unmodified	_LLGLSIGVP_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77911376953125	2	434.778754	867.542954	-0.81007	-0.0003522	3.4341	0.0014931	2.624	0.0011409	434.7801064754335	48.077	2.7534	48.052	47.541	50.295	-0.025112					179	68	4	0	0	0	0.7932	1	4008	4008		25.45	1.2474	1	1940000	+		30261	18720	20153	20163	34449	34449					0.10388447425293634
LLGLSIGVP	9	Unmodified	_LLGLSIGVP_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801818847656	2	434.778754	867.542954	-0.52026	-0.0002262	3.3297	0.0014477	2.8095	0.0012215	434.78008033903114	55.345	1.972	55.318	54.208	56.18	-0.027275					116	58	3	0	0	0	0.78851	1	5082	5082		28.254	7.7724	1	290730	+		30262	18720	20153	20163	34450	34450					0.10388447425293634
LLGLSIGVP	9	Unmodified	_LLGLSIGVP_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77947998046875	2	434.778754	867.542954	0.085891	3.7343E-05	2.526	0.0010983	2.6119	0.0011356	434.77973178522114	39.697	1.6335	39.706	39.141	40.774	0.0092812					137	39	4	0	0	0	0.78851	1	2949	2949		28.254	0	1	4100400	+		30263	18720	20153	20163	34451	34451					0.10388447425293634
LLGLSIGVP	9	Unmodified	_LLGLSIGVP_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77972412109375	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.78851	1	2884	2884		28.254	2.8041	1	2537300	+		30264	18720	20153	20163	34452	34452					0.10388447425293634
LLGLSIGVP	9	Unmodified	_LLGLSIGVP_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7789001464844	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.7932	1	1883	1883		19.36	0	1	2158200	+		30265	18720	20153	20163	34453	34453					0.10388447425293634
LLGLSIGVP	9	Unmodified	_LLGLSIGVP_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77923583984375	2	434.778754	867.542954	-0.23402	-0.00010175	2.835	0.0012326	2.601	0.0011308	434.77987896985167	43.157	1.7547	43.107	42.38	44.135	-0.050308					136	44	4	0	0	0	0.7932	1	3089	3089		25.45	0	1	2479900	+		30266	18720	20153	20163	34454	34454					0.10388447425293634
LLGLSIGVP	9	Unmodified	_LLGLSIGVP_					0	0	0			REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	REV__ENST00000497304.6_1_1:1247871-1248066:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7790832519531	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.7932	1	3760	3760		20.482	0	1	6567600	+		30267	18720	20153	20163	34455	34455					0.10388447425293634
LLGLSKKMA	9	Unmodified	_LLGLSKKMA_					0	0	0		ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.8006896972656	2	480.799163	959.583773	-0.095215	-4.5779E-05	3.4854	0.0016758	3.3902	0.00163	480.80074135922035	95.38	4.3631	95.446	94.67	99.033	0.065918					323	101	5	0	0	0	0.69914	12	9976	9942;9952;9976;9988;10000;10012;10036;10048;10061;10073;10134;10171		40.573	10.363	1	17278000			30268	12832	20154	20164	34456;34457;34458;34459;34460;34461;34462;34463;34464;34465;34466;34467	34458					0.10236465473246881
LLGLSKKMA	9	Unmodified	_LLGLSKKMA_					0	0	0		ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.80096435546875	2	480.799163	959.583773	2.0445	0.00098299	1.3323	0.00064055	3.3768	0.0016235	480.7997098356697	95.287	4.3541	95.23	94.639	98.993	-0.057526					326	101	5	0	0	0	0.69914	11	10162	10138;10150;10162;10186;10198;10210;10222;10234;10266;10308;10399		40.573	7.4508	1	19210000			30269	12832	20154	20164	34468;34469;34470;34471;34472;34473;34474;34475;34476;34477;34478	34470					0.10236465473246881
LLGLSKKMA	9	Unmodified	_LLGLSKKMA_					0	0	0		ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.8008117675781	2	480.799163	959.583773	-0.54823	-0.00026359	3.9246	0.001887	3.3764	0.0016234	480.80093903656257	95.17	4.1898	95.217	94.619	98.809	0.046982					308	97	5	0	0	0	0.5393	8	10036	10024;10036;10060;10096;10109;10139;10183;10195		50.025	13.777	1	18729000			30270	12832	20154	20164	34479;34480;34481;34482;34483;34484;34485;34486	34480					0.10236465473246881
LLGLSKKMA	9	Unmodified	_LLGLSKKMA_					0	0	0		ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.800537109375	2	480.799163	959.583773	-0.79098	-0.0003803	4.1385	0.0019898	3.3475	0.0016095	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.62081	5	9754	9697;9718;9754;9778;9840		45.952	13.997	1	18644000			30271	12832	20154	20164	34487;34488;34489;34490;34491	34489					0.10236465473246881
LLGLSKKMA	9	Unmodified	_LLGLSKKMA_					0	0	0		ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8007507324219	2	480.799163	959.583773	0.73477	0.00035328	2.7032	0.0012997	3.438	0.001653	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.69914	8	9722	9711;9722;9734;9746;9758;9782;9819;9831		40.573	8.6178	1	18148000			30272	12832	20154	20164	34492;34493;34494;34495;34496;34497;34498;34499	34493					0.10236465473246881
LLGLSKKMA	9	Unmodified	_LLGLSKKMA_					0	0	0		ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.8013916015625	2	480.799163	959.583773	1.8222	0.00087609	2.1635	0.0010402	3.9856	0.0019163	480.8000859655465	94.893	2.2797	95.326	94.801	97.081	0.4324					179	54	5	0	0	0	0.69914	3	11387	11326;11338;11387		40.573	16.069	1	7713500			30273	12832	20154	20164	34500;34501;34502	34502					0.10236465473246881
LLGLSKKMA	9	Unmodified	_LLGLSKKMA_					0	0	0		ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	ENST00000498967.3_2_12:124068190-124068862:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.8006591796875	2	480.799163	959.583773	-0.2736	-0.00013155	4.2609	0.0020487	3.9873	0.0019171	480.80110367170755	95.033	3.9341	95.453	94.933	98.867	0.41964					263	95	5	0	0	0	0.62081	4	11402	11402;11426;11438;11462		45.952	19.156	1	9403500			30274	12832	20154	20164	34503;34504;34505;34506	34503					0.10236465473246881
LLGLSLEGPL	10	Unmodified	_LLGLSLEGPL_					0	0	0		ENST00000484749.5_1_1:228360905-228363211:+|nuORF	ENST00000484749.5_1_1:228360905-228363211:+|nuORF	ENST00000484749.5_1_1:228360905-228363211:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3099670410156	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.5	1	63.531	63.031	64.031	0.030243								0	0	0	0.45132	1	5561	5561		23.042	2.0956	1				30275	12544	20155	20165	34507	34507					0.09632084279917308
LLGLSLYP	8	Unmodified	_LLGLSLYP_					0	0	0		ENSG00000185561|ENST00000330676|TLCD2	ENSG00000185561|ENST00000330676|TLCD2	ENSG00000185561|ENST00000330676|TLCD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.7638244628906	2	438.265479	874.516405	-1.5666	-0.00068658	-3.1125	-0.0013641	-4.6791	-0.0020507	438.2640033133023	45.783	1.2838	45.798	45.032	46.315	0.015511					49	34	2	0	0	0	0.89457	1	3289	3289		37.028	7.1869	1	101570			30276	7724	20156	20166	34508	34508					0.07412758533951092
LLGLSPVVP	9	Unmodified	_LLGLSPVVP_					0	0	0			REV__nc|ENSG00000100767|O95428-2|PAPLN	REV__nc|ENSG00000100767|O95428-2|PAPLN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.7876892089844	2	447.786579	893.558604	-0.2396	-0.00010729	3.1431	0.0014074	2.9035	0.0013001	447.7878572308977	38.23	0.51868	38.753	38.434	38.952	0.52235					37	12	4	0	0	0	0.7932	1	3149	3149		19.36	1.0356	1	825840	+		30277	28713	20157	20167	34509	34509					0.1075673394233263
LLGLSVPGFSN	11	Unmodified	_LLGLSVPGFSN_					0	0	0			REV__chr7:110963565-111391838|34|17.85|0.29|5.96|-|ENST00000450877|IMMP2L,IMMP2L	REV__chr7:110963565-111391838|34|17.85|0.29|5.96|-|ENST00000450877|IMMP2L,IMMP2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3059692382812	2	552.308406	1102.60226	-1.4446	-0.00079788	-2.0305	-0.0011215	-3.4752	-0.0019194	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.70737	1	9360	9360		30.318	1.1477	1	1677300	+		30278	15897	20158	20168	34510	34510					0.055062986488110255
LLGLTDDP	8	Unmodified	_LLGLTDDP_					0	0	0		ENSG00000197706|ENST00000343399|OR6C74;ENSG00000198283|ENST00000360374|OR5B21;ENSG00000205330|ENST00000642104|OR6C1;ENSG00000188324|ENST00000358433|OR6C6;ENSG00000183303|ENST00000329434|OR5P2	ENSG00000197706|ENST00000343399|OR6C74;ENSG00000188324|ENST00000358433|OR6C6;ENSG00000183303|ENST00000329434|OR5P2	ENSG00000183303|ENST00000329434|OR5P2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.22784423828125	2	422.226551	842.438549	-0.18819	-7.946E-05	2.9504	0.0012457	2.7622	0.0011663	422.22774658617425	61.684	0.88657	61.675	61.564	62.45	-0.0094147					63	38	2	0	0	0	0.86288	1	5722	5722		26.796	0	1	445730			30279	8191;7922;7518	20159	20169	34511	34511					0.011027008779024072
LLGLTKPVA	9	Unmodified	_LLGLTKPVA_					0	0	0			REV__ENSG00000151779|ENST00000281513|NBAS;REV__nc|ENSG00000151779|A2RRP1-2|NBAS	REV__nc|ENSG00000151779|A2RRP1-2|NBAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3014831542969	2	456.299853	910.585153	0.15231	6.9501E-05	2.9243	0.0013344	3.0766	0.0014039	456.30102814495837	33.268	1.6065	33.378	33.034	34.64	0.10991					186	70	4	0	0	0	0.74721	1	1584	1584		37.159	5.2042	1	1696300	+		30280	20268;29931	20160	20170	34512	34512					0.1262842283365444
LLGLTLVAMT	10	Unmodified	_LLGLTLVAMT_					0	0	0		ENSG00000008283|ENST00000360793|CYB561;ENST00000583478.1_1_17:61514659-61514908:-|nuORF;nc|ENSG00000008283|P49447-2|CYB561;ENST00000577368.5_1_17:61512979-61514908:-|nuORF	ENSG00000008283|ENST00000360793|CYB561;ENST00000577368.5_1_17:61512979-61514908:-|nuORF	ENSG00000008283|ENST00000360793|CYB561	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3131103515625	2	516.312103	1030.60965	0.80556	0.00041592	2.4849	0.001283	3.2904	0.0016989	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.6398	2	10627	10627;10674		47.916	5.2042	1	72906000			30281	739;14066	20161	20171	34513;34514	34513					0.09557314924882121
LLGLTLVPG	9	Unmodified	_LLGLTLVPG_					0	0	0			REV__nc|ENSG00000135902|Q07001-2|CHRND	REV__nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78765869140625	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.5393	1	3133	3133		50.025	7.5501	1	12471000	+		30282	19262	20162	20172	34515	34515					0.11308733942325944
LLGLTLVPG	9	Unmodified	_LLGLTLVPG_					0	0	0			REV__nc|ENSG00000135902|Q07001-2|CHRND	REV__nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78790283203125	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.7932	1	2851	2851		26.796	0	1	14534000	+		30283	19262	20162	20172	34516	34516					0.11308733942325944
LLGLTLVPG	9	Unmodified	_LLGLTLVPG_					0	0	0			REV__nc|ENSG00000135902|Q07001-2|CHRND	REV__nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78765869140625	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.49378	1	2779	2779		52.299	0	1	9571700	+		30284	19262	20162	20172	34517	34517					0.11308733942325944
LLGLTLVPG	9	Unmodified	_LLGLTLVPG_					0	0	0			REV__nc|ENSG00000135902|Q07001-2|CHRND	REV__nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7865905761719	2	441.786579	881.558604	-1.3207	-0.00058348	2.7134	0.0011988	1.3927	0.00061528	441.78767453164585	40.807	2.1151	41.396	40.908	43.023	0.58915					198	57	5	0	0	0	0.67235	1	3518	3518		42.474	0	1	200250000	+		30285	19262	20162	20172	34518	34518					0.11308733942325944
LLGLTLVPGE	10	Unmodified	_LLGLTLVPGE_					0	0	0			REV__nc|ENSG00000135902|Q07001-2|CHRND	REV__nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30804443359375	2	506.307875	1010.6012	0.29899	0.00015138	1.2838	0.00065	1.5828	0.00080139	506.3084880553604	44.091	1.7417	44.143	43.633	45.375	0.051537					61	41	3	0	0	0	0.84112	1	3085	3085		37.159	1.5408	1	407010	+		30286	19262	20163	20173	34519	34519					0.09632084279905939
LLGLTLVPGE	10	Unmodified	_LLGLTLVPGE_					0	0	0			REV__nc|ENSG00000135902|Q07001-2|CHRND	REV__nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3083801269531	2	506.307875	1010.6012	-0.22503	-0.00011393	2.1509	0.001089	1.9259	0.00097507	506.3089485725691	49.441	1.8113	49.348	48.371	50.182	-0.093182					75	43	2	0	0	0	0.86589	1	3885	3885		29.15	1.2673	1	253850	+		30287	19262	20163	20173	34520	34520					0.09632084279905939
LLGLVCPVLI	10	Unmodified	_LLGLVCPVLI_					0	0	0			REV__ENST00000569969.5_2_16:28996642-28997062:+|nuORF	REV__ENST00000569969.5_2_16:28996642-28997062:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.3331298828125	2	520.332839	1038.65112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.969	1	61.359	60.859	61.859	0.38945								0	0	0	0.45132	1	6491	6491		19.36	0	1		+		30288	23627	20164	20174	34521	34521					0.13334495684193826
LLGLVPSSTT	10	Unmodified	_LLGLVPSSTT_					0	0	0			REV__ENST00000480655.5_1_20:34262894-34263203:-|nuORF	REV__ENST00000480655.5_1_20:34262894-34263203:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30084228515625	2	494.289682	986.564812	-0.5895	-0.00029138	-4.3702	-0.0021601	-4.9597	-0.0024515	494.2877330305939	97.2	0.16212	97.431	97.37	97.532	0.23103					6	3	2	0	0	0	0.37624	1	10054	10054		37.159	13.636	1	309650	+		30289	27423	20165	20175	34522	34522					0.07099207383191697
LLGLWARGP	9	Unmodified	_LLGLWARGP_					0	0	0		ENSG00000135776|ENST00000344517|ABCB10	ENSG00000135776|ENST00000344517|ABCB10	ENSG00000135776|ENST00000344517|ABCB10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.298828125	2	491.795269	981.575986	-2.308	-0.0011351	4.1081	0.0020204	1.8001	0.00088528	491.7972659418399	66.608	0.76704	66.637	66.27	67.037	0.028587					49	36	2	0	0	0	0.7932	1	6317	6317		24.203	3.2558	1	82032			30290	4054	20166	20176	34523	34523					0.08446074267988024
LLGMHKKSL	9	Unmodified	_LLGMHKKSL_					0	0	0		ENSG00000119614|ENST00000261980|VSX2	ENSG00000119614|ENST00000261980|VSX2	ENSG00000119614|ENST00000261980|VSX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8077392578125	2	513.810062	1025.60557	0.37872	0.00019459	-2.5289	-0.0012994	-2.1502	-0.0011048	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.64555	1	4137	4137		44.377	3.8046	1	971720			30291	3078	20167	20177	34524	34524					0.09379270221825209
LLGMHVLLR	9	Unmodified	_LLGMHVLLR_					0	0	0			REV__ENSG00000100401|ENST00000356244|RANGAP1	REV__ENSG00000100401|ENST00000356244|RANGAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3241577148438	2	526.325879	1050.63721	0.48631	0.00025596	-2.4776	-0.001304	-1.9913	-0.001048	526.3244623018427	62.826	0.99297	62.947	62.385	63.378	0.1209					77	46	2	0	0	0	0.77546	1	5506	5506		31.955	3.7006	1	145820	+		30292	17189	20168	20178	34525	34525					0.11391262975757854
LLGMKVKLSKL	11	Unmodified	_LLGMKVKLSKL_					0	0	0			REV__nc|ENSG00000111880|O60942-4|RNGTT	REV__nc|ENSG00000111880|O60942-4|RNGTT	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.40234375	2	615.404327	1228.7941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.348	1	21.416	20.916	21.916	0.068251								0	0	0	0.56276	1	565	565		7.8045	0.11424	1		+		30293	17904	20169	20179	34526	34526					0.1888550307544392
LLGMLIIVC	9	Unmodified	_LLGMLIIVC_					0	0	0			REV__nc|ENSG00000177058|Q8NBW4-2|SLC38A9	REV__nc|ENSG00000177058|Q8NBW4-2|SLC38A9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.79107666015625	2	487.792492	973.570431	0.64551	0.00031488	-4.4861	-0.0021883	-3.8406	-0.0018734	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.78292	1	8496	8496		29.842	3.0454	1	1929300	+		30294	22176	20170	20180	34527	34527					0.08258891369666799
LLGMLIIVCM	10	Oxidation (M)	_LLGMLIIVCM(Oxidation (M))_		LLGMLIIVCM(1)		LLGM(-47)LIIVCM(47)	0	0	1			REV__nc|ENSG00000177058|Q8NBW4-2|SLC38A9	REV__nc|ENSG00000177058|Q8NBW4-2|SLC38A9	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3114013671875	2	561.310192	1120.60583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.235	1	58.788	58.288	59.288	0.55323								0	0	0	0.45132	1	6107	6107		54.765	8.7924	2		+		30295	22176	20171	20181	34528	34528		333			0.05035185835163247
LLGMLLDLGG	10	Unmodified	_LLGMLLDLGG_					0	0	0			REV__nc|ENSG00000140691|Q96C12-3|ARMC5	REV__nc|ENSG00000140691|Q96C12-3|ARMC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2900390625	2	501.288628	1000.5627	-0.50775	-0.00025453	3.985	0.0019976	3.4772	0.0017431	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.67608	1	8320	8320		45.952	8.1404	1	3014100	+		30296	19638	20172	20182	34529	34529					0.062444553737577735
LLGMLPLL	8	Unmodified	_LLGMLPLL_					0	0	0		ENSG00000125910|ENST00000246115|S1PR4	ENSG00000125910|ENST00000246115|S1PR4	ENSG00000125910|ENST00000246115|S1PR4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7793884277344	2	435.280075	868.545597	-0.6528	-0.00028415	4.2297	0.0018411	3.5769	0.001557	435.2818334568454	54.971	1.4376	54.922	54.358	55.796	-0.049271					77	45	2	0	0	0	0.4196	1	4515	4515		24.504	0	1	181210			30297	3427	20173	20183	34530	34530					0.10606579558600515
LLGMPKQL	8	Unmodified	_LLGMPKQL_					0	0	0			REV__ENSG00000095777|ENST00000642920|MYO3A	REV__ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2746276855469	2	450.272781	898.531009	1.3234	0.00059587	2.0996	0.00094537	3.4229	0.0015412	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.87276	1	9954	9954		29.842	4.2675	1	51698000	+		30298	17068	20174	20184	34531	34531					0.07768507410446546
LLGMPKQL	8	Unmodified	_LLGMPKQL_					0	0	0			REV__ENSG00000095777|ENST00000642920|MYO3A	REV__ENSG00000095777|ENST00000642920|MYO3A	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2735900878906	2	450.272781	898.531009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.89	1	113.92	113.42	114.42	0.027321								0	0	0	0.29871	1	12457	12457		23.037	2.5549	1		+		30299	17068	20174	20184	34532	34532					0.07768507410446546
LLGMRGMGG	9	Unmodified	_LLGMRGMGG_					0	0	0		ENST00000533188.1_1_1:201457913-201476204:-|nuORF;ENST00000532313.5_1_1:201457913-201465398:-|nuORF	ENST00000533188.1_1_1:201457913-201476204:-|nuORF	ENST00000533188.1_1_1:201457913-201476204:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	446.2314453125	2	446.23059	890.446628	1.573	0.00070191	0.98736	0.00044059	2.5603	0.0011425	446.230954277814	103.74	1.7619	103.78	103.07	104.83	0.041481					107	42	3	0	0	0	0.77546	1	11287	11287		31.955	3.7006	1	1977800			30300	13373	20175	20185	34533	34533					-0.0029776667794294553
LLGMTNRP	8	Unmodified	_LLGMTNRP_					0	0	0			REV__ENST00000320431.7_1_3:49755223-49755382:-|nuORF	REV__ENST00000320431.7_1_3:49755223-49755382:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.2478942871094	2	451.249837	900.485122	-1.0589	-0.00047784	-1.4176	-0.0006397	-2.4766	-0.0011175	451.2490578408484	67.679	1.2813	67.739	67.313	68.595	0.059288					106	47	3	0	0	0	0.87276	1	6091	6091		29.842	5.6388	1	166740	+		30301	24997	20176	20186	34534	34534					0.0308986222820522
LLGMVQPSL	9	Unmodified	_LLGMVQPSL_					0	0	0			REV__nc|ENSG00000135903|P23760|PAX3	REV__nc|ENSG00000135903|P23760|PAX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.277587890625	2	479.275521	956.536489	-0.098426	-4.7173E-05	3.9538	0.001895	3.8554	0.0018478	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.76255	2	8070	8036;8070		35.618	6.2903	1	1929800	+		30302	19263	20177	20187	34535;34536	34536					0.05648186202256511
LLGMVQPSL	9	Unmodified	_LLGMVQPSL_					0	0	0			REV__nc|ENSG00000135903|P23760|PAX3	REV__nc|ENSG00000135903|P23760|PAX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27752685546875	2	479.275521	956.536489	-0.098244	-4.7086E-05	4.0257	0.0019294	3.9274	0.0018823	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.67345	2	8337	8337;8795		42.396	9.2769	1	6799600	+		30303	19263	20177	20187	34537;34538	34537					0.05648186202256511
LLGMVQPSL	9	Unmodified	_LLGMVQPSL_					0	0	0			REV__nc|ENSG00000135903|P23760|PAX3	REV__nc|ENSG00000135903|P23760|PAX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27734375	2	479.275521	956.536489	0.53004	0.00025403	3.2196	0.0015431	3.7496	0.0017971	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.71772	1	8324	8324		39.253	10.103	1	2070000	+		30304	19263	20177	20187	34539	34539					0.05648186202256511
LLGMVQPSL	9	Unmodified	_LLGMVQPSL_					0	0	0			REV__nc|ENSG00000135903|P23760|PAX3	REV__nc|ENSG00000135903|P23760|PAX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27740478515625	2	479.275521	956.536489	0.63867	0.0003061	3.2635	0.0015641	3.9021	0.0018702	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.74721	3	8127	8127;8270;8488		37.159	5.0025	1	6593200	+		30305	19263	20177	20187	34540;34541;34542	34540					0.05648186202256511
LLGMVQPSL	9	Unmodified	_LLGMVQPSL_					0	0	0			REV__nc|ENSG00000135903|P23760|PAX3	REV__nc|ENSG00000135903|P23760|PAX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.277587890625	2	479.275521	956.536489	0.28639	0.00013726	3.6814	0.0017644	3.9678	0.0019017	479.27712266759204	81.87	2.8073	82.296	80.642	83.45	0.42646					178	68	3	0	0	0	0.69624	1	9574	9574		40.778	3.6191	1	1790000	+		30306	19263	20177	20187	34543	34543					0.05648186202256511
LLGNCAVEV	9	Unmodified	_LLGNCAVEV_					0	0	0			REV__ENST00000563441.5_1_15:75651254-75660924:-|nuORF	REV__ENST00000563441.5_1_15:75651254-75660924:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	459.24005126953125	2	459.241678	916.468803	-1.1984	-0.00055035	-2.3563	-0.0010821	-3.5547	-0.0016324	459.24036857381975	47.447	1.199	47.466	47.099	48.298	0.018967					78	36	3	0	0	0	0.22631	1	3527	3527		71.296	0	1	800470	+		30307	19614	20178	20188	34544	34544					0.007227362714502306
LLGNCAVEV	9	Unmodified	_LLGNCAVEV_					0	0	0			REV__ENST00000563441.5_1_15:75651254-75660924:-|nuORF	REV__ENST00000563441.5_1_15:75651254-75660924:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	459.2400817871094	2	459.241678	916.468803	0.28287	0.00012991	-3.987	-0.001831	-3.7041	-0.0017011	459.23972142324425	47.477	1.3773	47.515	47.034	48.411	0.037731					78	43	2	0	0	0	0.35373	1	3585	3585		60.972	0	1	852740	+		30308	19614	20178	20188	34545	34545					0.007227362714502306
LLGNGVLIL	9	Unmodified	_LLGNGVLIL_					0	0	0		nc|ENSG00000179443|Q8NH95|OR13C6P;nc|ENSG00000243641|P0DN81|OR13C7;ENSG00000278889|ENST00000341959|OR2S2	nc|ENSG00000179443|Q8NH95|OR13C6P;ENSG00000278889|ENST00000341959|OR2S2	nc|ENSG00000179443|Q8NH95|OR13C6P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3015441894531	2	456.299853	910.585153	-1.2496	-0.00057018	3.0457	0.0013898	1.7962	0.00081959	456.3011111940197	43.185	1.5794	43.191	42.556	44.136	0.0057487					96	41	4	0	0	0	0.76996	1	2949	2949		33.516	0	1	673120			30309	15127;9038	20179	20189	34546	34546					0.1262842283365444
LLGNKIDLADR	11	Unmodified	_LLGNKIDLADR_					0	0	0		ENSG00000276600|ENST00000617070|RAB7B	ENSG00000276600|ENST00000617070|RAB7B	ENSG00000276600|ENST00000617070|RAB7B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.2924499511719	3	409.906705	1226.69829	1.4724	0.00060356	-0.33468	-0.00013719	1.1377	0.00046637	409.9064953559416	23.672	1.0698	23.29	22.724	23.794	-0.38178					50	24	3	0	0	0	0.17243	1	1041	1041		17.167	0	1	322730			30310	9014	20180	20190	34547	34547					0.09400446488893976
LLGNLLIIS	9	Unmodified	_LLGNLLIIS_					0	0	0		ENSG00000255804|ENST00000540461|OR6J1	ENSG00000255804|ENST00000540461|OR6J1	ENSG00000255804|ENST00000540461|OR6J1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.30816650390625	2	478.312961	954.611368	-1.6811	-0.00080408	3.8311	0.0018325	2.1501	0.0010284	478.3146343149254	44.945	1.268	44.945	44.024	45.292	0					37	30	2	0	0	0	0.20789	1	3293	3293		16.473	0	1	59682			30311	8890	20181	20191	34548	34548					0.13224692005155703
LLGNPKGALRL	11	Unmodified	_LLGNPKGALRL_					0	0	0		ENST00000487475.5_1_3:184019439-184019490:+|nuORF	ENST00000487475.5_1_3:184019439-184019490:+|nuORF	ENST00000487475.5_1_3:184019439-184019490:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3692016601562	2	576.36659	1150.71863	0.10953	6.313E-05	4.4437	0.0025612	4.5532	0.0026243	576.3689741250236	46.486	1.2914	46.407	45.799	47.091	-0.079006					89	36	3	0	0	0	0.7342	1	3444	3444		25.574	4.6271	1	317790			30312	12601	20182	20192	34549	34549					0.14929661939368088
LLGNPVVW	8	Unmodified	_LLGNPVVW_					0	0	0		ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF	ENSG00000009830|ENST00000261534|POMT2	ENSG00000009830|ENST00000261534|POMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.259765625	2	449.263271	896.511988	-1.3066	-0.000587	-4.4706	-0.0020085	-5.7772	-0.0025955	449.2609052127223	72.511	0.72772	72.643	72.306	73.033	0.13145					51	25	3	0	0	0	0.83466	1	6646	6646		23.037	0	1	221400			30313	757	20183	20193	34550	34550					0.05959294111039526
LLGNSPVL	8	Unmodified	_LLGNSPVL_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78497314453125	2	406.747453	811.480354	1.045	0.00042506	2.0337	0.00082719	3.0787	0.0012522	406.74815293878527	34.149	0.41113	34.454	34.324	34.735	0.30494					15	9	2	0	0	0	0.4196	1	2523	2523		29.15	3.6994	1	92559			30314	5268	20184	20194	34551	34551					0.06707301357084816
LLGNSPVL	8	Unmodified	_LLGNSPVL_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.747453	811.480354	1.6658	0.00067756	6.9731	0.0028363	8.6389	0.0035139	406.74878325397685	34.534	0.70835	34.54	34.154	34.862	0.0063934	0.043443	0.0033662	NaN	29.15	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14952			30315	5268	20184	20194							0.06707301357084816
LLGPALDL	8	Unmodified	_LLGPALDL_					0	0	0		nc|ENSG00000187144|Q7Z572-2|SPATA21;ENSG00000187144|ENST00000335496|SPATA21	nc|ENSG00000187144|Q7Z572-2|SPATA21	nc|ENSG00000187144|Q7Z572-2|SPATA21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2483215332031	2	406.249829	810.485105	-1.9277	-0.00078311	-1.0996	-0.00044672	-3.0273	-0.0012298	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.81548	1	8868	8868		20.482	1.1219	1	31099000			30316	7844	20185	20195	34552	34552					0.07228185499855044
LLGPAPTGS	9	Unmodified	_LLGPAPTGS_					0	0	0			REV__ENSG00000161992|ENST00000409413|PRR35	REV__ENSG00000161992|ENST00000409413|PRR35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.7286682128906	2	406.729261	811.443968	-1.8366	-0.00074698	-0.93352	-0.00037969	-2.7701	-0.0011267	406.7287979203731	76.234	2.0799	76.359	74.725	76.805	0.12485					97	60	2	0	0	0	0.76996	1	7105	7105		33.516	0	1	145690	+		30317	20788	20186	20196	34553	34553					0.030704244603725783
LLGPAVGGK	9	Unmodified	_LLGPAVGGK_					0	0	0		ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.25726318359375	2	406.255446	810.496338	0.018638	7.5718E-06	3.5962	0.001461	3.6148	0.0014685	406.2568104671837	38.391	1.0373	38.363	37.994	39.031	-0.027843					57	23	3	0	0	0	0.7932	1	2637	2637		25.45	0	1	345700			30318	12652	20187	20197	34554	34554					0.08351007594001203
LLGPAVGGK	9	Unmodified	_LLGPAVGGK_					0	0	0		ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2574768066406	2	406.255446	810.496338	-0.029064	-1.1807E-05	3.7836	0.0015371	3.7546	0.0015253	406.2568941466039	49.248	2.932	49.245	47.93	50.862	-0.0031128					122	73	3	0	0	0	0.20789	1	3969	3969		30.504	0	1	274920			30319	12652	20187	20197	34555	34555					0.08351007594001203
LLGPAVGGK	9	Unmodified	_LLGPAVGGK_					0	0	0		ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2966613769531	2	406.255446	810.496338	0.75404	0.00030633	2.9581	0.0012017	3.7121	0.0015081	406.2565544588528	38.264	1.1198	38.275	37.857	38.976	0.011177					57	25	3	0	0	0	0.20789	1	2698	2698		37.159	8.9048	1	260970			30320	12652	20187	20197	34556	34556					0.08351007594001203
LLGPAVGGK	9	Unmodified	_LLGPAVGGK_					0	0	0		ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2568664550781	2	406.255446	810.496338	0.32239	0.00013097	4.1267	0.0016765	4.4491	0.0018075	406.25699058298386	55.031	2.344	55.122	53.969	56.313	0.091167					99	72	2	0	0	0	0.7932	1	4592	4592		24.203	3.7209	1	315510			30321	12652	20187	20197	34557	34557					0.08351007594001203
LLGPAVGGK	9	Unmodified	_LLGPAVGGK_					0	0	0		ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2569580078125	2	406.255446	810.496338	0.016868	6.8526E-06	3.7223	0.0015122	3.7391	0.001519	406.25685626914105	33.24	0.97973	33.208	32.974	33.953	-0.032677					91	43	3	0	0	0	0.77546	1	1589	1589		31.955	0	1	414640			30322	12652	20187	20197	34558	34558					0.08351007594001203
LLGPAVGGK	9	Unmodified	_LLGPAVGGK_					0	0	0		ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.54376220703125	2	406.255446	810.496338	0.09382	3.8115E-05	3.5514	0.0014428	3.6452	0.0014809	406.25677773418806	48.153	1.1868	48.622	48.007	49.194	0.46941					42	29	2	0	0	0	0.20789	1	4677	4677		11.511	0	1	239410			30323	12652	20187	20197	34559	34559					0.08351007594001203
LLGPAVGGK	9	Unmodified	_LLGPAVGGK_					0	0	0		ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.255446	810.496338	-1.1824	-0.00048037	7.3735	0.0029955	6.1911	0.0025152	406.25738085394306	38.274	1.353	38.224	37.761	39.114	-0.050369	-0.0040997	0.0028156	NaN	37.159	96	30	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	276420			30324	12652	20187	20197							0.08351007594001203
LLGPAVGGK	9	Unmodified	_LLGPAVGGK_					0	0	0		ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.9061	-0.00077436	5.6759	0.0023058	3.7698	0.0015315	406.2576255845654	38.191	1.0409	38.208	37.912	38.952	0.016563	-0.02028	0.0014362	NaN	37.159	74	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	300930			30325	12652	20187	20197							0.08351007594001203
LLGPAVGGK	9	Unmodified	_LLGPAVGGK_					0	0	0		ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	ENST00000489475.5_2_17:46651338-46659882:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	406.255446	810.496338	-0.58894	-0.00023926	4.0655	0.0016516	3.4765	0.0014124	406.2570048679533	47.982	1.2305	48.905	48.278	49.508	0.92315	0.1416	0.00025866	NaN	11.511	49	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	221250			30326	12652	20187	20197							0.08351007594001203
LLGPCQRG	8	Unmodified	_LLGPCQRG_					0	0	0			REV__ENSG00000171817|ENST00000316433|ZNF540	REV__ENSG00000171817|ENST00000316433|ZNF540	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.22723388671875	2	422.228905	842.443257	0.38075	0.00016076	-3.2224	-0.0013606	-2.8417	-0.0011998	422.22752903910396	61.401	1.1417	61.52	61.387	62.529	0.11901					70	54	2	0	0	0	0.86288	1	5362	5362		26.796	2.2921	1	712460	+		30327	21773	20188	20198	34560	34560					0.01573306539683017
LLGPEPVDPS	10	Unmodified	_LLGPEPVDPS_					0	0	0		ENST00000398701.2_1_10:75570658-75571450:-|nuORF	ENST00000398701.2_1_10:75570658-75571450:-|nuORF	ENST00000398701.2_1_10:75570658-75571450:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.7655334472656	2	512.27149	1022.52843	0.67921	0.00034794	-1.5043	-0.00077062	-0.82511	-0.00042268	512.2706005119885	54.547	0.37878	54.954	54.781	55.16	0.40663					19	8	3	0	0	0	0.37624	1	5551	5551		35.618	0	1	139800			30328	11191	20189	20199	34561	34561					0.018063304864767815
LLGPGPRVGF	10	Unmodified	_LLGPGPRVGF_					0	0	0		ENST00000544726.2_2_12:109592493-109592730:+|nuORF	ENST00000544726.2_2_12:109592493-109592730:+|nuORF	ENST00000544726.2_2_12:109592493-109592730:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7983703613281	2	506.800552	1011.58655	0.035087	1.7782E-05	1.482	0.00075107	1.5171	0.00076886	506.80134407750546	51.852	1.4357	51.85	50.901	52.337	-0.0020447					55	33	2	0	0	0	0.86452	1	4409	4409		30.504	6.3009	1	101000			30329	13572	20190	20200	34562	34562					0.0812205692243424
LLGPGPRVGF	10	Unmodified	_LLGPGPRVGF_					0	0	0		ENST00000544726.2_2_12:109592493-109592730:+|nuORF	ENST00000544726.2_2_12:109592493-109592730:+|nuORF	ENST00000544726.2_2_12:109592493-109592730:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8002624511719	2	506.800552	1011.58655	-0.65008	-0.00032946	1.6125	0.00081723	0.96246	0.00048778	506.8012923744614	46.783	1.6998	46.754	45.886	47.586	-0.028782					74	44	2	0	0	0	0.86452	1	3744	3744		30.504	2.2494	1	223510			30330	13572	20190	20200	34563	34563					0.0812205692243424
LLGPGPRVGF	10	Unmodified	_LLGPGPRVGF_					0	0	0		ENST00000544726.2_2_12:109592493-109592730:+|nuORF	ENST00000544726.2_2_12:109592493-109592730:+|nuORF	ENST00000544726.2_2_12:109592493-109592730:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8026428222656	2	506.800552	1011.58655	-0.49009	-0.00024838	2.3405	0.0011862	1.8504	0.00093778	506.80171853826346	50.706	1.8822	50.736	49.561	51.443	0.029629					72	54	2	0	0	0	0.86589	1	3954	3954		29.15	3.6994	1	171430			30331	13572	20190	20200	34564	34564					0.0812205692243424
LLGPHAPK	8	Unmodified	_LLGPHAPK_					0	0	0			REV__ENST00000380637.7_1_21:40887043-40887124:+|nuORF	REV__ENST00000380637.7_1_21:40887043-40887124:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	416.7542419433594	2	416.755613	831.496673	-1.2346	-0.00051453	0.0008669	3.6129E-07	-1.2337	-0.00051417	416.7554996796795	69.232	0.75401	69.298	68.944	69.698	0.065506					85	35	3	0	0	0	0.82464	1	6213	6213		21.702	0	1	1082800	+		30332	25949	20191	20201	34565	34565					0.07418427313848497
LLGPIKAR	8	Unmodified	_LLGPIKAR_					0	0	0			REV__nc|ENSG00000090534|P40225-3|THPO	REV__nc|ENSG00000090534|P40225-3|THPO	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2513732910156	2	434.292362	866.570172	-0.034891	-1.5153E-05	0.35686	0.00015498	0.32197	0.00013983	434.2923806126626	78.194	0.96976	78.143	77.711	78.681	-0.050789					55	31	2	0	0	0	0.4196	1	7755	7755		8.2313	0	1	206230	+		30333	16990	20192	20202	34566	34566					0.13154975756310705
LLGPIKAR	8	Unmodified	_LLGPIKAR_					0	0	0			REV__nc|ENSG00000090534|P40225-3|THPO	REV__nc|ENSG00000090534|P40225-3|THPO	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.251708984375	2	434.292362	866.570172	1.576	0.00068446	-1.2796	-0.00055573	0.29642	0.00012873	434.29166779035756	78.023	0.9736	78.073	77.727	78.701	0.04969					60	33	2	0	0	0	0.4196	1	7690	7690		20.482	12.251	1	233100	+		30334	16990	20192	20202	34567	34567					0.13154975756310705
LLGPIKAR	8	Unmodified	_LLGPIKAR_					0	0	0			REV__nc|ENSG00000090534|P40225-3|THPO	REV__nc|ENSG00000090534|P40225-3|THPO	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2515563964844	2	434.292362	866.570172	1.7484	0.00075932	-0.4504	-0.00019561	1.298	0.00056372	434.2919332409692	80.888	0.51862	80.944	80.732	81.251	0.055916					21	11	3	0	0	0	0.4196	1	8049	8049		12.959	5.2689	1	56739	+		30335	16990	20192	20202	34568	34568					0.13154975756310705
LLGPIKAR	8	Unmodified	_LLGPIKAR_					0	0	0			REV__nc|ENSG00000090534|P40225-3|THPO	REV__nc|ENSG00000090534|P40225-3|THPO	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2512512207031	2	434.292362	866.570172	-1.5827	-0.00068733	4.0694	0.0017673	2.4868	0.00108	434.2929564101069	77.217	1.0335	77.341	77.052	78.085	0.12485					103	45	3	0	0	0	0.4196	1	7217	7217		20.482	6.7065	1	292380	+		30336	16990	20192	20202	34569	34569					0.13154975756310705
LLGPIKAR	8	Unmodified	_LLGPIKAR_					0	0	0			REV__nc|ENSG00000090534|P40225-3|THPO	REV__nc|ENSG00000090534|P40225-3|THPO	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2516174316406	2	434.292362	866.570172	0.5238	0.00022748	2.4451	0.0010619	2.9689	0.0012894	434.29203280716973	77.186	1.0489	77.321	76.979	78.028	0.13478					103	49	3	0	0	0	0.4196	1	7236	7236		13.775	0	1	334610	+		30337	16990	20192	20202	34570	34570					0.13154975756310705
LLGPIKAR	8	Unmodified	_LLGPIKAR_					0	0	0			REV__nc|ENSG00000090534|P40225-3|THPO	REV__nc|ENSG00000090534|P40225-3|THPO	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2518005371094	2	434.292362	866.570172	-1.4748	-0.00064052	3.3963	0.001475	1.9215	0.00083448	434.2930026135497	77.9	1.0061	77.991	77.733	78.74	0.091438					83	35	3	0	0	0	0.4196	1	7330	7330		20.482	1.1219	1	189850	+		30338	16990	20192	20202	34571	34571					0.13154975756310705
LLGPKLSP	8	Unmodified	_LLGPKLSP_					0	0	0			REV__ENST00000331483.8_1_17:79801123-79801321:-|nuORF	REV__ENST00000331483.8_1_17:79801123-79801321:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7668762207031	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.86288	1	2466	2466		26.796	5.0938	1	2034000	+		30339	25126	20193	20203	34572	34572					0.09792178253815109
LLGPKLSP	8	Unmodified	_LLGPKLSP_					0	0	0			REV__ENST00000331483.8_1_17:79801123-79801321:-|nuORF	REV__ENST00000331483.8_1_17:79801123-79801321:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.26739501953125	2	412.765646	823.516739	0.8823	0.00036418	0.81659	0.00033706	1.6989	0.00070124	412.7668384055558	39.31	1.1423	39.322	38.717	39.86	0.011173					50	26	3	0	0	0	0.89962	1	2738	2738		38.806	8.9646	1	209500	+		30340	25126	20193	20203	34573	34573					0.09792178253815109
LLGPKLSP	8	Unmodified	_LLGPKLSP_					0	0	0			REV__ENST00000331483.8_1_17:79801123-79801321:-|nuORF	REV__ENST00000331483.8_1_17:79801123-79801321:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2676086425781	2	412.765646	823.516739	1.0742	0.00044338	1.0077	0.00041595	2.0819	0.00085933	412.7659693172007	40.207	1.4192	40.217	39.687	41.106	0.0092812					79	35	3	0	0	0	0.884	1	2852	2852		33.516	3.674	1	573960	+		30341	25126	20193	20203	34574	34574					0.09792178253815109
LLGPKLSP	8	Unmodified	_LLGPKLSP_					0	0	0			REV__ENST00000331483.8_1_17:79801123-79801321:-|nuORF	REV__ENST00000331483.8_1_17:79801123-79801321:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2668151855469	2	412.765646	823.516739	-1.9024	-0.00078523	4.0039	0.0016527	2.1015	0.00086745	412.7675544540149	40.173	1.81	40.179	39.296	41.106	0.0065002					141	57	4	0	0	0	0.89043	1	2414	2414		35.618	2.1027	1	726100	+		30342	25126	20193	20203	34575	34575					0.09792178253815109
LLGPKTERRPV	11	Unmodified	_LLGPKTERRPV_					0	0	0			REV__ENST00000515152.1_1_4:185570945-185573203:+|nuORF	REV__ENST00000515152.1_1_4:185570945-185573203:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.3814697265625	2	633.388054	1264.76155	-0.12792	-8.1025E-05	-3.7555	-0.0023787	-3.8834	-0.0024597	633.3855992497944	56.952	1.0049	56.939	56.691	57.696	-0.012203					73	35	3	0	0	0	0.74022	1	5145	5145		9.7057	1.4706	1	170190	+		30343	28026	20194	20204	34576	34576					0.13976431996775318
LLGPKTERRPV	11	Unmodified	_LLGPKTERRPV_					0	0	0			REV__ENST00000515152.1_1_4:185570945-185573203:+|nuORF	REV__ENST00000515152.1_1_4:185570945-185573203:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.9269714355469	3	422.594461	1264.76155	-0.18605	-7.8623E-05	-4.1752	-0.0017644	-4.3613	-0.0018431	422.59257278124653	58.831	1.5397	58.817	57.968	59.508	-0.013729					80	49	3	0	0	0	0.73621	1	5385	5385		25.126	3.4402	1	107360	+		30344	28026	20194	20204	34577	34577					0.13976431996775318
LLGPKVKIHF	10	Unmodified	_LLGPKVKIHF_					0	0	0			REV__ENST00000237536.8_2_20:35414692-35414812:-|nuORF	REV__ENST00000237536.8_2_20:35414692-35414812:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3703002929688	2	576.368601	1150.72265	0.37302	0.000215	0.43446	0.00025041	0.80748	0.00046541	576.3686531735401	44.828	1.4469	44.877	44.259	45.706	0.048996					74	35	3	0	0	0	0.86589	1	3165	3165		29.15	5.6269	1	270470	+		30345	24218	20195	20205	34578	34578					0.15331751433086538
LLGPKVKIHF	10	Unmodified	_LLGPKVKIHF_					0	0	0			REV__ENST00000237536.8_2_20:35414692-35414812:-|nuORF	REV__ENST00000237536.8_2_20:35414692-35414812:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3693237304688	2	576.368601	1150.72265	0.38706	0.00022309	0.56386	0.00032499	0.95092	0.00054808	576.3687857053872	46.409	2.2039	46.447	45.362	47.565	0.038181					117	60	3	0	0	0	0.85939	1	3401	3401		23.042	0	1	342020	+		30346	24218	20195	20205	34579	34579					0.15331751433086538
LLGPKVKIHF	10	Unmodified	_LLGPKVKIHF_					0	0	0			REV__ENST00000237536.8_2_20:35414692-35414812:-|nuORF	REV__ENST00000237536.8_2_20:35414692-35414812:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.36962890625	2	576.368601	1150.72265	-0.74314	-0.00042832	2.2532	0.0012986	1.51	0.00087033	576.3696767962949	37.867	1.5412	38.18	37.746	39.287	0.31312					100	38	4	0	0	0	0.86452	1	3094	3094		30.504	5.9844	1	2629900	+		30347	24218	20195	20205	34580	34580					0.15331751433086538
LLGPKVKIHF	10	Unmodified	_LLGPKVKIHF_					0	0	0			REV__ENST00000237536.8_2_20:35414692-35414812:-|nuORF	REV__ENST00000237536.8_2_20:35414692-35414812:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3684692382812	2	576.368601	1150.72265	-1.8889	-0.0010887	1.4195	0.00081817	-0.46939	-0.00027054	576.3692460621713	40.332	1.1916	40.921	40.26	41.451	0.58915					99	31	4	0	0	0	0.86452	1	3467	3467		30.504	6.3009	1	6057000	+		30348	24218	20195	20205	34581	34581					0.15331751433086538
LLGPLEEVL	9	Unmodified	_LLGPLEEVL_					0	0	0		ENST00000281961.2_1_2:39893203-39931290:+|nuORF;nc|ENSG00000152154|Q8NBL3-2|TMEM178A	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	ENST00000281961.2_1_2:39893203-39931290:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7963562011719	2	491.794601	981.574648	-0.22794	-0.0001121	2.4317	0.0011959	2.2037	0.0010838	491.795700180553	50.73	2.2718	51.177	50.348	52.62	0.4476					135	54	3	0	0	0	0.77546	1	5000	5000		31.955	7.7521	1	1342800			30349	9630	20196	20206	34582	34582					0.08312395388577443
LLGPLIKE	8	Unmodified	_LLGPLIKE_					0	0	0			REV__nc|ENSG00000188917|Q96GJ1-3|TRMT2B	REV__nc|ENSG00000188917|Q96GJ1-3|TRMT2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.78753662109375	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.82464	2	2725	2725;2944		35.201	1.6851	1	11085000	+		30350	23045	20197	20207	34583;34584	34583					0.11308733942325944
LLGPLIKE	8	Unmodified	_LLGPLIKE_					0	0	0			REV__nc|ENSG00000188917|Q96GJ1-3|TRMT2B	REV__nc|ENSG00000188917|Q96GJ1-3|TRMT2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78741455078125	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.87922	1	3254	3254		31.955	1.4512	1	12471000	+		30351	23045	20197	20207	34585	34585					0.11308733942325944
LLGPLIKE	8	Unmodified	_LLGPLIKE_					0	0	0			REV__nc|ENSG00000188917|Q96GJ1-3|TRMT2B	REV__nc|ENSG00000188917|Q96GJ1-3|TRMT2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7867126464844	2	441.786579	881.558604	-1.2332	-0.00054481	3.5907	0.0015863	2.3575	0.0010415	441.7880163081002	41.793	3.3981	41.755	40.553	43.951	-0.038223					227	85	5	0	0	0	0.81724	2	3053	3053;3254		29.842	0	1	13573000	+		30352	23045	20197	20207	34586;34587	34586					0.11308733942325944
LLGPLIKE	8	Unmodified	_LLGPLIKE_					0	0	0			REV__nc|ENSG00000188917|Q96GJ1-3|TRMT2B	REV__nc|ENSG00000188917|Q96GJ1-3|TRMT2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7875061035156	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.89457	1	3262	3262		37.028	0	1	12523000	+		30353	23045	20197	20207	34588	34588					0.11308733942325944
LLGPPHHLK	9	Unmodified	_LLGPPHHLK_					0	0	0			REV__chr19:49311411-49342438|22|10.36|0.06|7.48|-|2|SLC6A16,TEAD2|1	REV__chr19:49311411-49342438|22|10.36|0.06|7.48|-|2|SLC6A16,TEAD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.30859375	2	506.308544	1010.60253	-0.49937	-0.00025284	1.2245	0.00061995	0.72508	0.00036711	506.30921071470516	49.299	2.411	49.324	47.87	50.281	0.025578					89	62	2	0	0	0	0.72402	1	3814	3814		38.806	6.8513	1	190740	+		30354	15715	20198	20208	34589	34589					0.0976576315931652
LLGPPHHLK	9	Unmodified	_LLGPPHHLK_					0	0	0			REV__chr19:49311411-49342438|22|10.36|0.06|7.48|-|2|SLC6A16,TEAD2|1	REV__chr19:49311411-49342438|22|10.36|0.06|7.48|-|2|SLC6A16,TEAD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3072204589844	2	506.308544	1010.60253	-0.49442	-0.00025033	1.6696	0.00084534	1.1752	0.00059501	506.30930722746564	51.737	1.7906	51.772	50.998	52.788	0.034588					70	53	2	0	0	0	0.7932	1	4214	4214		20.482	0	1	138440	+		30355	15715	20198	20208	34590	34590					0.0976576315931652
LLGPPHHLK	9	Unmodified	_LLGPPHHLK_					0	0	0			REV__chr19:49311411-49342438|22|10.36|0.06|7.48|-|2|SLC6A16,TEAD2|1	REV__chr19:49311411-49342438|22|10.36|0.06|7.48|-|2|SLC6A16,TEAD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30816650390625	2	506.308544	1010.60253	0.29899	0.00015138	-0.03693	-1.8698E-05	0.26206	0.00013269	506.3084880553604	44.091	1.7417	44.143	43.633	45.375	0.051537					61	41	3	0	0	0	0.77546	1	3097	3097		31.955	2.8053	1	407010	+		30356	15715	20198	20208	34591	34591					0.0976576315931652
LLGPPHHLK	9	Unmodified	_LLGPPHHLK_					0	0	0			REV__chr19:49311411-49342438|22|10.36|0.06|7.48|-|2|SLC6A16,TEAD2|1	REV__chr19:49311411-49342438|22|10.36|0.06|7.48|-|2|SLC6A16,TEAD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3101806640625	2	506.308544	1010.60253	0.3191	0.00016156	0.67968	0.00034413	0.99877	0.00050569	506.3087607672274	46.383	1.7392	46.421	45.728	47.467	0.038181					61	47	2	0	0	0	0.7932	1	3402	3402		18.324	0.95945	1	157780	+		30357	15715	20198	20208	34592	34592					0.0976576315931652
LLGPPHHLK	9	Unmodified	_LLGPPHHLK_					0	0	0			REV__chr19:49311411-49342438|22|10.36|0.06|7.48|-|2|SLC6A16,TEAD2|1	REV__chr19:49311411-49342438|22|10.36|0.06|7.48|-|2|SLC6A16,TEAD2|1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	506.308544	1010.60253	0.32262	0.00016334	0.95127	0.00048164	1.2739	0.00064498	506.30927962065823	48.067	0.95173	48.99	48.317	49.269	0.92315	-0.33974	6.8234E-05	NaN	38.806	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	160730	+		30358	15715	20198	20208							0.0976576315931652
LLGPQLCLR	9	Unmodified	_LLGPQLCLR_					0	0	0			REV__ENST00000523151.5_1_8:130364907-130382560:-|nuORF	REV__ENST00000523151.5_1_8:130364907-130382560:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8011779785156	2	506.802237	1011.58992	-0.49867	-0.00025273	-1.8472	-0.00093615	-2.3458	-0.0011889	506.80125930962566	45.611	0.78478	45.623	45.395	46.179	0.012058					40	21	2	0	0	0	0.78058	1	3369	3369		30.504	2.6214	1	207840	+		30359	28135	20199	20209	34593	34593					0.08458983704758793
LLGPRLVLA	9	Unmodified	_LLGPRLVLA_					0	0	0		ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.3271179199219	2	476.32112	950.627687	-1.3575	-0.0006466	1.6631	0.00079218	0.30562	0.00014557	476.3218375222885	67.773	0.73666	67.773	67.417	68.153	0					40	29	2	0	0	0	0.62081	1	5985	5985		45.952	7.1458	1	75953			30360	6578	20200	20210	34594	34594					0.15039817961894641
LLGPSRRRGSL	11	Unmodified	_LLGPSRRRGSL_					0	0	0			REV__ENSG00000272031|ENST00000606888|ANKRD34A	REV__ENSG00000272031|ENST00000606888|ANKRD34A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	606.367919921875	2	606.370195	1210.72584	-0.28087	-0.00017031	-0.76863	-0.00046608	-1.0495	-0.00063639	606.369636454931	94.737	2.9757	94.737	93.326	96.302	0					126	69	2	0	0	0	0.75495	1	9408	9408		20.947	0	1	318720	+		30361	23984	20201	20211	34595	34595					0.12890394539795125
LLGPTLLGP	9	Unmodified	_LLGPTLLGP_					0	0	0			REV__ENST00000202917.9_1_12:113357194-113357533:+|nuORF	REV__ENST00000202917.9_1_12:113357194-113357533:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.7791748046875	2	440.778754	879.542954	-2.1616	-0.00095279	-0.65676	-0.00028948	-2.8184	-0.0012423	440.7784168730194	20.827	0.4344	20.827	20.572	21.007	0					36	20	2	0	0	0	0.76996	1	523	523		33.516	5.6333	1	61472	+		30362	24095	20202	20212	34596	34596					0.09836447425277584
LLGPTLLGP	9	Unmodified	_LLGPTLLGP_					0	0	0			REV__ENST00000202917.9_1_12:113357194-113357533:+|nuORF	REV__ENST00000202917.9_1_12:113357194-113357533:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	440.778754	879.542954	-2.1616	-0.00095279	-0.65676	-0.00028948	-2.8184	-0.0012423	440.7784168730194	20.827	0.4344	20.827	20.572	21.007	0	0.063581	0.00054202	NaN	33.516	36	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61472	+		30363	24095	20202	20212							0.09836447425277584
LLGPTLLGP	9	Unmodified	_LLGPTLLGP_					0	0	0			REV__ENST00000202917.9_1_12:113357194-113357533:+|nuORF	REV__ENST00000202917.9_1_12:113357194-113357533:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	440.778754	879.542954	0.020264	8.9321E-06	-2.4963	-0.0011003	-2.4761	-0.0010914	440.77756384866575	20.598	0.36287	20.674	20.521	20.884	0.075848	-0.089422	-0.0010797	NaN	33.516	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47988	+		30364	24095	20202	20212							0.09836447425277584
LLGPTLLGP	9	Unmodified	_LLGPTLLGP_					0	0	0			REV__ENST00000202917.9_1_12:113357194-113357533:+|nuORF	REV__ENST00000202917.9_1_12:113357194-113357533:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	440.778754	879.542954	0.58053	0.00025588	-3.3137	-0.0014606	-2.7332	-0.0012047	440.777041027986	20.81	0.3589	20.789	20.594	20.953	-0.020924	0.025841	-0.0018002	NaN	33.516	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37523	+		30365	24095	20202	20212							0.09836447425277584
LLGPWLLLLVL	11	Unmodified	_LLGPWLLLLVL_					0	0	0		nc|ENSG00000012124|P20273-4|CD22;nc|ENSG00000012124|P20273-3|CD22;ENSG00000012124|ENST00000085219|CD22;nc|ENSG00000012124|P20273-2|CD22	nc|ENSG00000012124|P20273-4|CD22	nc|ENSG00000012124|P20273-4|CD22	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.283203125	3	417.280932	1248.82097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.58	1	68.602	68.102	69.102	0.021599								0	0	0	0.56276	1	6476	6476		10.587	0.4829	1				30366	797	20203	20213	34597	34597					0.20650934958280232
LLGPWLRN	8	Unmodified	_LLGPWLRN_					0	0	0			REV__ENST00000475417.1_1_6:24480140-24495238:-|nuORF	REV__ENST00000475417.1_1_6:24480140-24495238:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.2872619628906	2	484.787444	967.560336	-1.1421	-0.00055367	-2.1854	-0.0010594	-3.3275	-0.0016131	484.78789018167805	41.476	1.8948	41.435	40.856	42.751	-0.04081					148	48	4	0	0	0	0.87276	2	3122	3122;3207		37.028	5.0736	1	1666200	+		30367	27319	20204	20214	34598;34599	34598					0.07525787750932977
LLGPWLRN	8	Unmodified	_LLGPWLRN_					0	0	0			REV__ENST00000475417.1_1_6:24480140-24495238:-|nuORF	REV__ENST00000475417.1_1_6:24480140-24495238:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.28656005859375	2	484.787444	967.560336	-2.6464	-0.0012829	-0.55589	-0.00026949	-3.2023	-0.0015524	484.78861378184325	41.582	2.0114	41.585	40.8	42.811	0.0034142					135	50	4	0	0	0	0.94132	1	3090	3090		54.765	7.9982	1	1266400	+		30368	27319	20204	20214	34600	34600					0.07525787750932977
LLGPWLRN	8	Unmodified	_LLGPWLRN_					0	0	0			REV__ENST00000475417.1_1_6:24480140-24495238:-|nuORF	REV__ENST00000475417.1_1_6:24480140-24495238:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7864685058594	2	484.787444	967.560336	-1.9972	-0.00096823	2.4086	0.0011677	0.41137	0.00019943	484.7880846012334	40.756	1.0376	41.148	40.377	41.415	0.39209					49	28	3	0	0	0	0.89457	1	3525	3525		37.028	3.5129	1	7044500	+		30369	27319	20204	20214	34601	34601					0.07525787750932977
LLGPWLRN	8	Unmodified	_LLGPWLRN_					0	0	0			REV__ENST00000475417.1_1_6:24480140-24495238:-|nuORF	REV__ENST00000475417.1_1_6:24480140-24495238:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7868957519531	2	484.787444	967.560336	-2.1932	-0.0010632	2.0475	0.0009926	-0.14566	-7.0612E-05	484.78805875753903	41.198	1.3446	41.59	41.379	42.723	0.39209					59	35	3	0	0	0	0.87276	2	3568	3568;3580		39.021	3.8208	1	3024000	+		30370	27319	20204	20214	34602;34603	34602					0.07525787750932977
LLGPYAICAC	10	Unmodified	_LLGPYAICAC_					0	0	0		ENST00000280606.6_1_16:31097395-31098001:-|nuORF	ENST00000280606.6_1_16:31097395-31098001:-|nuORF	ENST00000280606.6_1_16:31097395-31098001:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2528076171875	2	512.253731	1022.49291	-0.40094	-0.00020538	0.54555	0.00027946	0.14461	7.4075E-05	512.253883322564	54.419	1.295	54.474	54.011	55.305	0.055614					87	42	3	0	0	0	0.85976	1	4466	4466		35.201	0	1	718970			30371	9621	20205	20215	34604	34604					-0.01743746566558002
LLGQALPLVP	10	Unmodified	_LLGQALPLVP_					0	0	0		ENST00000480290.5_1_7:127991288-127999229:-|nuORF	ENST00000480290.5_1_7:127991288-127999229:-|nuORF	ENST00000480290.5_1_7:127991288-127999229:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.8246154785156	2	510.826235	1019.63792	0.80541	0.00041142	-3.9725	-0.0020293	-3.1671	-0.0016178	510.82405155702656	17.943	0.29901	17.919	17.778	18.077	-0.024033					25	15	2	0	0	0	0.85939	1	276	276		23.042	3.939	1	254120			30372	12428	20206	20216	34605	34605					0.12888380896481522
LLGQIKRSRE	10	Unmodified	_LLGQIKRSRE_					0	0	0			REV__ENSG00000167641|ENST00000301242|PPP1R14A	REV__ENSG00000167641|ENST00000301242|PPP1R14A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5814208984375	3	400.578811	1198.7146	3.1805	0.001274	0.74448	0.00029822	3.925	0.0015723	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.86698	1	12425	12425		28.081	2.0181	1	4827300	+		30373	21409	20207	20217	34606	34606					0.12319572445630911
LLGQIPLP	8	Unmodified	_LLGQIPLP_					0	0	0			REV__nc|ENSG00000198183|Q9NP55-2|BPIFA1	REV__nc|ENSG00000198183|Q9NP55-2|BPIFA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.77508544921875	2	425.773471	849.53239	-0.22834	-9.7219E-05	3.7298	0.0015881	3.5015	0.0014908	425.77496787601876	38.455	1.3684	38.796	38.418	39.787	0.34187					106	32	5	0	0	0	0.82464	4	3140	3140;3152;3163;3187		21.702	0	1	17151000	+		30374	23305	20208	20218	34607;34608;34609;34610	34607					0.10160464770854105
LLGQIPLP	8	Unmodified	_LLGQIPLP_					0	0	0			REV__nc|ENSG00000198183|Q9NP55-2|BPIFA1	REV__nc|ENSG00000198183|Q9NP55-2|BPIFA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7746887207031	2	425.773471	849.53239	-0.27567	-0.00011737	3.7288	0.0015876	3.4531	0.0014702	425.77498181524743	38.327	1.6801	38.849	38.513	40.193	0.52235					122	39	5	0	0	0	0.81548	2	3193	3145;3193		29.842	0	1	16884000	+		30375	23305	20208	20218	34611;34612	34612					0.10160464770854105
LLGQLLALA	9	Unmodified	_LLGQLLALA_					0	0	0			REV__ENSG00000231274|ENST00000612221|SBK3	REV__ENSG00000231274|ENST00000612221|SBK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3011779785156	2	456.299853	910.585153	-0.75416	-0.00034412	3.5877	0.0016371	2.8336	0.001293	456.3012900851617	35.065	1.7041	35.071	34.727	36.431	0.0063934					112	39	4	0	0	0	0.67235	1	2160	2160		42.474	7.2737	1	634200	+		30376	23761	20209	20219	34613	34613					0.12628422833643071
LLGQLLALA	9	Unmodified	_LLGQLLALA_					0	0	0			REV__ENSG00000231274|ENST00000612221|SBK3	REV__ENSG00000231274|ENST00000612221|SBK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3013000488281	2	456.299853	910.585153	0.15231	6.9501E-05	2.9243	0.0013344	3.0766	0.0014039	456.30102814495837	33.268	1.6065	33.378	33.034	34.64	0.10991					186	70	4	0	0	0	0.7932	1	1641	1641		20.482	3.7769	1	1696300	+		30377	23761	20209	20219	34614	34614					0.12628422833643071
LLGQPIIHED	10	Unmodified	_LLGQPIIHED_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3295288085938	2	567.811313	1133.60807	0.49052	0.00027852	-2.9531	-0.0016768	-2.4626	-0.0013983	567.8098157068105	93.549	0.87685	93.778	93.12	93.996	0.22863					27	20	2	0	0	0	0.37624	1	9426	9426		26.693	4.733	1	86683	+		30378	17579	20210	20220	34615	34615					0.04661397160475644
LLGQRNGGV	9	Unmodified	_LLGQRNGGV_					0	0	0		ENST00000372296.5_1_X:107334730-107334766:-|nuORF	ENST00000372296.5_1_X:107334730-107334766:-|nuORF	ENST00000372296.5_1_X:107334730-107334766:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.26300048828125	2	457.264333	912.514114	-1.2803	-0.00058543	1.4305	0.00065413	0.15023	6.8693E-05	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.76402	1	7293	7293		35.201	3.2459	1	812040			30379	10694	20211	20221	34616	34616					0.05435722848869773
LLGQRQAA	8	Unmodified	_LLGQRQAA_					0	0	0			REV__ENST00000497493.1_1_21:38599661-38600668:-|nuORF	REV__ENST00000497493.1_1_21:38599661-38600668:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2615966796875	2	428.753601	855.49265	-1.1368	-0.00048742	-3.4163	-0.0014648	-4.5532	-0.0019522	428.75265102766866	91.126	0.16096	91.126	90.984	91.145	0					5	3	2	0	0	0	0.4196	1	8892	8892		13.775	3.5906	1	114970	+		30380	27770	20212	20222	34617	34617					0.05912337820132052
LLGQWPIR	8	Unmodified	_LLGQWPIR_					0	0	0			REV__ENSG00000124469|ENST00000244336|CEACAM8	REV__ENSG00000124469|ENST00000244336|CEACAM8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7960205078125	2	491.795269	981.575986	-1.6029	-0.00078829	2.358	0.0011597	0.75513	0.00037137	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.86791	1	3420	3420		28.254	1.4582	1	603870	+		30381	18586	20213	20223	34618	34618					0.08446074267988024
LLGQWPIR	8	Unmodified	_LLGQWPIR_					0	0	0			REV__ENSG00000124469|ENST00000244336|CEACAM8	REV__ENSG00000124469|ENST00000244336|CEACAM8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7959899902344	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.85277	1	4526	4526		25.45	2.4077	1	781720	+		30382	18586	20213	20223	34619	34619					0.08446074267988024
LLGQWPIR	8	Unmodified	_LLGQWPIR_					0	0	0			REV__ENSG00000124469|ENST00000244336|CEACAM8	REV__ENSG00000124469|ENST00000244336|CEACAM8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79547119140625	2	491.795269	981.575986	-0.035071	-1.7248E-05	1.1757	0.00057819	1.1406	0.00056094	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.81548	1	5037	5037		20.482	1.1219	1	1625300	+		30383	18586	20213	20223	34620	34620					0.08446074267988024
LLGQWPIR	8	Unmodified	_LLGQWPIR_					0	0	0			REV__ENSG00000124469|ENST00000244336|CEACAM8	REV__ENSG00000124469|ENST00000244336|CEACAM8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7955017089844	2	491.795269	981.575986	-0.99617	-0.00048991	0.64691	0.00031815	-0.34926	-0.00017177	491.7955324242566	43.442	1.556	43.406	42.885	44.441	-0.035816					74	36	3	0	0	0	0.86288	1	3397	3397		26.796	6.3143	1	171190	+		30384	18586	20213	20223	34621	34621					0.08446074267988024
LLGQWPIR	8	Unmodified	_LLGQWPIR_					0	0	0			REV__ENSG00000124469|ENST00000244336|CEACAM8	REV__ENSG00000124469|ENST00000244336|CEACAM8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79571533203125	2	491.795269	981.575986	-0.86128	-0.00042357	1.3952	0.00068615	0.53392	0.00026258	491.79583711541846	45.285	1.262	45.254	44.708	45.97	-0.031067					74	28	3	0	0	0	0.86288	1	3653	3653		26.796	5.0938	1	480390	+		30385	18586	20213	20223	34622	34622					0.08446074267988024
LLGQWPIR	8	Unmodified	_LLGQWPIR_					0	0	0			REV__ENSG00000124469|ENST00000244336|CEACAM8	REV__ENSG00000124469|ENST00000244336|CEACAM8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7956848144531	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.86288	1	4128	4128		26.796	0	1	1111900	+		30386	18586	20213	20223	34623	34623					0.08446074267988024
LLGQWPIR	8	Unmodified	_LLGQWPIR_					0	0	0			REV__ENSG00000124469|ENST00000244336|CEACAM8	REV__ENSG00000124469|ENST00000244336|CEACAM8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7956237792969	2	491.795269	981.575986	-0.36021	-0.00017715	1.3022	0.0006404	0.94195	0.00046325	491.79587618632917	55.368	1.5692	55.341	54.702	56.271	-0.027279					123	47	4	0	0	0	0.86288	1	5105	5105		26.796	2.5934	1	1374900	+		30387	18586	20213	20223	34624	34624					0.08446074267988024
LLGQWPIR	8	Unmodified	_LLGQWPIR_					0	0	0			REV__ENSG00000124469|ENST00000244336|CEACAM8	REV__ENSG00000124469|ENST00000244336|CEACAM8	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.794921875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.796	1	56.83	56.33	57.33	0.033184								0	0	0	0.30316	1	5141	5141		42.474	1.9018	1		+		30388	18586	20213	20223	34625	34625					0.08446074267988024
LLGQWPIR	8	Unmodified	_LLGQWPIR_					0	0	0			REV__ENSG00000124469|ENST00000244336|CEACAM8	REV__ENSG00000124469|ENST00000244336|CEACAM8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79376220703125	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.86288	1	3337	3337		26.796	2.5934	1	2747400	+		30389	18586	20213	20223	34626	34626					0.08446074267988024
LLGQWPIR	8	Unmodified	_LLGQWPIR_					0	0	0			REV__ENSG00000124469|ENST00000244336|CEACAM8	REV__ENSG00000124469|ENST00000244336|CEACAM8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956237792969	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.85277	2	3818	3625;3818		26.796	4.9683	1	1219600	+		30390	18586	20213	20223	34627;34628	34628					0.08446074267988024
LLGQWPIR	8	Unmodified	_LLGQWPIR_					0	0	0			REV__ENSG00000124469|ENST00000244336|CEACAM8	REV__ENSG00000124469|ENST00000244336|CEACAM8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79534912109375	2	491.795269	981.575986	-1.2395	-0.00060959	1.4172	0.00069695	0.17764	8.7362E-05	491.7958275421146	44.647	1.7443	45.492	44.612	46.357	0.84437					115	42	4	0	0	0	0.884	1	4148	4148		33.516	5.2613	1	6753400	+		30391	18586	20213	20223	34629	34629					0.08446074267988024
LLGRALAGR	9	Unmodified	_LLGRALAGR_					0	0	0			REV__ENST00000488261.6_3_10:135271820-135304727:+|nuORF	REV__ENST00000488261.6_3_10:135271820-135304727:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8002624511719	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.7932	1	3480	3480		23.042	3.6825	1	1570500	+		30392	27591	20214	20224	34630	34630					0.1163659249950797
LLGREIVM	8	Unmodified	_LLGREIVM_					0	0	0			REV__nc|ENSG00000115464|Q70CQ2-3|USP34	REV__nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774963378906	2	465.775688	929.536823	-0.25577	-0.00011913	4.2902	0.0019982	4.0344	0.0018791	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.87922	1	7825	7825		31.955	4.0726	1	451640	+		30393	18123	20215	20225	34631	34631					0.06923605922111165
LLGRGGARGGI	11	Unmodified	_LLGRGGARGGI_					0	0	0		L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|68|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|68|1|sense	L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|68|1|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.80810546875	2	513.811982	1025.60941	-1.4445	-0.00074222	-4.4488	-0.0022859	-5.8934	-0.0030281	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.66312	4	3838	3750;3772;3838;3874		37.159	6.6555	1	1675700			30394	14655	20216	20226	34632;34633;34634;34635	34634					0.09763076039916996
LLGRGGFS	8	Unmodified	_LLGRGGFS_					0	0	0		nc|ENSG00000146872|Q86UE8-3|TLK2;ENSG00000146872|ENST00000346027|TLK2;nc|ENSG00000146872|Q86UE8|TLK2;ENST00000456760.1_1_9:125449379-125449940:+|nuORF;ENST00000530992.1_1_17:32364642-32365872:-|nuORF;nc|ENSG00000198586|Q9UKI8-3|TLK1;nc|ENSG00000198586|Q9UKI8-4|TLK1;nc|ENSG00000198586|Q9UKI8-5|TLK1;ENSG00000198586|ENST00000431350|TLK1;nc|ENSG00000198586|Q9UKI8-2|TLK1	nc|ENSG00000146872|Q86UE8-3|TLK2;ENST00000530992.1_1_17:32364642-32365872:-|nuORF;nc|ENSG00000198586|Q9UKI8-3|TLK1	nc|ENSG00000146872|Q86UE8-3|TLK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.7308349609375	2	403.729595	805.444637	2.7323	0.0011031	-0.40392	-0.00016307	2.3284	0.00094003	403.72925673314853	99.693	1.4907	100.03	99.108	100.6	0.33294					77	37	3	0	0	0	0.82464	1	12055	12055		21.702	1.2205	1	609450			30395	4867;13352;8291	20217	20227	34636	34636					0.03413263900108632
LLGRIRRVL	9	Unmodified	_LLGRIRRVL_					0	0	0			REV__ENSG00000155561|ENST00000285968|NUP205	REV__ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3740234375	2	548.377292	1094.74003	-0.93575	-0.00051314	-4.429	-0.0024288	-5.3648	-0.0029419	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.7932	1	2492	2492		18.324	0.95945	1	651720	+		30396	20433	20218	20228	34637	34637					0.19645091758752642
LLGRKPRRSA	10	Unmodified	_LLGRKPRRSA_					0	0	0		ENSG00000171044|ENST00000416569|XKR6	ENSG00000171044|ENST00000416569|XKR6	ENSG00000171044|ENST00000416569|XKR6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	577.366943359375	2	577.367456	1152.72036	0.74115	0.00042792	-2.508	-0.0014481	-1.7669	-0.0010201	577.3658570064985	102.18	2.9839	102.23	101.81	104.79	0.043198					214	72	5	0	0	0	0.86218	1	11181	11181		32.812	10.853	1	10154000			30397	6634	20219	20229	34638	34638					0.1501071574798516
LLGRMLVLD	9	Unmodified	_LLGRMLVLD_					0	0	0		ENSG00000185386|ENST00000330651|MAPK11	ENSG00000185386|ENST00000330651|MAPK11	ENSG00000185386|ENST00000330651|MAPK11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3099365234375	2	515.309895	1028.60524	-0.67917	-0.00034999	0.73344	0.00037795	0.05427	2.7966E-05	515.3101163931515	57.417	1.3734	57.811	57.026	58.399	0.39407					93	33	4	0	0	0	0.17307	1	5948	5948		79.451	8.1553	1	3241100			30398	7709	20220	20230	34639	34639					0.09207850501957182
LLGRRNGG	8	Unmodified	_LLGRRNGG_					0	0	0		ENST00000588933.5_1_19:9544893-9545835:-|nuORF;ENST00000588221.5_1_19:9530876-9545835:-|nuORF	ENST00000588933.5_1_19:9544893-9545835:-|nuORF	ENST00000588933.5_1_19:9544893-9545835:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.75103759765625	2	421.751393	841.488233	-1.3453	-0.0005674	1.0717	0.00045198	-0.27365	-0.00011541	421.7520629711648	77.037	1.3073	77.037	76.021	77.329	0					79	55	2	0	0	0	0.89457	1	7048	7048		37.028	6.5248	1	212830			30399	14211	20221	20231	34640	34640					0.06114873397245901
LLGRRNGG	8	Unmodified	_LLGRRNGG_					0	0	0		ENST00000588933.5_1_19:9544893-9545835:-|nuORF;ENST00000588221.5_1_19:9530876-9545835:-|nuORF	ENST00000588933.5_1_19:9544893-9545835:-|nuORF	ENST00000588933.5_1_19:9544893-9545835:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.75201416015625	2	421.751393	841.488233	-1.7782	-0.00074997	4.1035	0.0017306	2.3252	0.00098067	421.75218958440666	77.386	3.85	77.511	77.102	80.952	0.12485					260	132	4	0	0	0	0.89457	1	7232	7232		37.028	1.4102	1	434130			30400	14211	20221	20231	34641	34641					0.06114873397245901
LLGRRNGG	8	Unmodified	_LLGRRNGG_					0	0	0		ENST00000588933.5_1_19:9544893-9545835:-|nuORF;ENST00000588221.5_1_19:9530876-9545835:-|nuORF	ENST00000588933.5_1_19:9544893-9545835:-|nuORF	ENST00000588933.5_1_19:9544893-9545835:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.75213623046875	2	421.751393	841.488233	0.52197	0.00022014	-0.4025	-0.00016975	0.11948	5.0389E-05	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.88915	1	7231	7231		35.201	7.3185	1	423780			30401	14211	20221	20231	34642	34642					0.06114873397245901
LLGRRNGG	8	Unmodified	_LLGRRNGG_					0	0	0		ENST00000588933.5_1_19:9544893-9545835:-|nuORF;ENST00000588221.5_1_19:9530876-9545835:-|nuORF	ENST00000588933.5_1_19:9544893-9545835:-|nuORF	ENST00000588933.5_1_19:9544893-9545835:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.75177001953125	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.418	1	77.509	77.009	78.009	0.091438								0	0	0	0.29694	1	7236	7236		37.028	0	1				30402	14211	20221	20231	34643	34643					0.06114873397245901
LLGRRVCADKM	11	Unmodified	_LLGRRVCADKM_					0	0	0		ENST00000464273.1_1_2:28974903-28999853:+|nuORF	ENST00000464273.1_1_2:28974903-28999853:+|nuORF	ENST00000464273.1_1_2:28974903-28999853:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.2347717285156	3	421.23377	1260.67948	-1.8464	-0.00077775	4.1069	0.00173	2.2606	0.00095222	421.23541419897134	44.357	0.75468	44.365	44.009	44.764	0.0084534					41	17	4	0	0	0	0.69071	1	3123	3123		33.039	0	1	300450			30403	12087	20222	20232	34644	34644					0.05956870321824681
LLGRRVCADKM	11	Unmodified	_LLGRRVCADKM_					0	0	0		ENST00000464273.1_1_2:28974903-28999853:+|nuORF	ENST00000464273.1_1_2:28974903-28999853:+|nuORF	ENST00000464273.1_1_2:28974903-28999853:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.23431396484375	3	421.23377	1260.67948	-0.32724	-0.00013784	2.536	0.0010683	2.2088	0.00093041	421.23477191014837	44.365	0.64981	44.306	43.956	44.606	-0.058258					35	15	3	0	0	0	0.58516	1	3128	3128		45.908	9.5905	1	156310			30404	12087	20222	20232	34645	34645					0.05956870321824681
LLGRVLAHV	9	Unmodified	_LLGRVLAHV_					0	0	0			REV__ENSG00000204839|ENST00000398882|MROH6	REV__ENSG00000204839|ENST00000398882|MROH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.31402587890625	2	489.316369	976.618185	-1.6498	-0.00080726	-3.082	-0.0015081	-4.7317	-0.0023153	489.3147299207674	95.17	1.9292	95.372	94.862	96.791	0.20242					112	45	5	0	0	0	0.7932	1	9690	9690		18.324	0	1	1907500	+		30405	23521	20223	20233	34646	34646					0.12894049676367558
LLGRVMLLH	9	Unmodified	_LLGRVMLLH_					0	0	0		chr19:17954681-17973808|52|29.75|0.21|7.16|+|ENST00000222249|KCNN1,KCNN1;ENSG00000105642|ENST00000684775|KCNN1;nc|ENSG00000105642|Q92952-2|KCNN1	chr19:17954681-17973808|52|29.75|0.21|7.16|+|ENST00000222249|KCNN1,KCNN1	chr19:17954681-17973808|52|29.75|0.21|7.16|+|ENST00000222249|KCNN1,KCNN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3234252929688	2	526.325879	1050.63721	-0.67072	-0.00035302	-1.355	-0.00071317	-2.0257	-0.0010662	526.3250687277414	64.714	3.1276	64.752	62.47	65.598	0.037849					207	130	2	0	0	0	0.7932	1	5507	5507		25.45	4.9683	1	198930			30406	268	20224	20234	34647	34647					0.11391262975780592
LLGRVRILS	9	Unmodified	_LLGRVRILS_					0	0	0		ENST00000492576.5_1_22:39052705-39067032:+|nuORF	ENST00000492576.5_1_22:39052705-39067032:+|nuORF	ENST00000492576.5_1_22:39052705-39067032:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8430786132812	2	513.842751	1025.67095	0.92898	0.00047735	-0.96955	-0.00049819	-0.040569	-2.0846E-05	513.842134150575	21.206	0.44043	21.274	21.065	21.506	0.068251					29	15	3	0	0	0	0.7932	1	550	550		26.693	3.6504	1	57532			30407	12704	20225	20235	34648	34648					0.15914007739183944
LLGRVWTPA	9	Unmodified	_LLGRVWTPA_					0	0	0		nc|ENSG00000103197|P49815-8|TSC2;ENST00000461648.2_1_16:2098014-2103834:+|nuORF	nc|ENSG00000103197|P49815-8|TSC2	nc|ENSG00000103197|P49815-8|TSC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.799560546875	2	506.800552	1011.58655	-1.4266	-0.00072302	3.1878	0.0016156	1.7612	0.00089255	506.8022071365967	51.979	1.1494	51.979	51.46	52.609	0					48	30	2	0	0	0	0.77546	1	4259	4259		31.955	1.4512	1	87647			30408	12028	20226	20236	34649	34649					0.08122056922422871
LLGRWKAL	8	Unmodified	_LLGRWKAL_					0	0	0		ENST00000496038.1_1_1:156627297-156628923:+|nuORF;ENSG00000132692|ENST00000329117|BCAN	ENST00000496038.1_1_1:156627297-156628923:+|nuORF	ENST00000496038.1_1_1:156627297-156628923:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8053894042969	2	478.805637	955.596721	-1.7281	-0.00082743	1.9447	0.00093115	0.21662	0.00010372	478.806439205216	41.295	1.2034	41.295	40.815	42.018	0					75	35	3	0	0	0	0.81548	1	2866	2866		20.482	1.1219	1	280900			30409	3820	20227	20237	34650	34650					0.11714664647661266
LLGSFYSI	8	Unmodified	_LLGSFYSI_					0	0	0			REV__nc|ENSG00000111077|Q63HR2-2|TNS2	REV__nc|ENSG00000111077|Q63HR2-2|TNS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.27471923828125	2	450.247286	898.48002	-0.38219	-0.00017208	1.6479	0.00074194	1.2657	0.00056986	450.24684116966745	93.008	0.6208	93.458	93.158	93.778	0.44988					20	14	2	0	0	0	0.4196	1	11133	11133		26.796	0	1	41689	+		30410	17848	20228	20238	34651	34651					0.026718816372408583
LLGSGGLLGGG	11	Unmodified	_LLGSGGLLGGG_					0	0	0		ENSG00000186190|ENST00000375494|BPIFB3	ENSG00000186190|ENST00000375494|BPIFB3	ENSG00000186190|ENST00000375494|BPIFB3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.27423095703125	2	450.761092	899.507631	-1.7748	-0.0008	-0.15758	-7.1032E-05	-1.9324	-0.00087103	450.7607517851086	93.096	0.41459	93.289	93.147	93.562	0.19239					12	9	2	0	0	0	0.17359	1	9393	9393		26.693	9.3279	1	157940			30411	7783	20229	20239	34652	34652					0.053857848974985245
LLGSGTPPA	9	Unmodified	_LLGSGTPPA_					0	0	0		ENST00000610085.1_1_7:148395223-148395484:-|nuORF	ENST00000610085.1_1_7:148395223-148395484:-|nuORF	ENST00000610085.1_1_7:148395223-148395484:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.7851257324219	2	406.729261	811.443968	-1.9165	-0.00077948	2.0651	0.00083993	0.14861	6.0445E-05	406.7301017518069	32.514	0.12861	32.566	32.485	32.613	0.05246					9	6	2	0	0	0	0.20789	1	1530	1530		29.15	10.825	1	20176			30412	14494	20230	20240	34653	34653					0.030704244603725783
LLGSGVGTV	9	Unmodified	_LLGSGVGTV_					0	0	0		nc|ENSG00000105875|A4D1P6-2|WDR91;ENSG00000105875|ENST00000354475|WDR91	nc|ENSG00000105875|A4D1P6-2|WDR91	nc|ENSG00000105875|A4D1P6-2|WDR91	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.22235107421875	2	401.737086	801.459619	0.09144	3.6735E-05	1.79	0.00071913	1.8815	0.00075586	401.73668006924487	31.112	0.47601	31.116	30.884	31.36	0.0037193					10	10	2	0	0	0	0.20789	1	2074	2074		31.955	14.59	1	44746			30413	2258	20231	20241	34654	34654					0.05094710977436989
LLGSHPCL	8	Unmodified	_LLGSHPCL_					0	0	0			REV__ENST00000225777.7_1_17:76168333-76168627:+|nuORF	REV__ENST00000225777.7_1_17:76168333-76168627:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2274475097656	2	420.225831	838.437109	2.4843	0.001044	2.4469	0.0010283	4.9312	0.0020722	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.89457	2	7765	7765;7874		37.028	3.5129	1	961790	+		30414	24177	20232	20242	34655;34656	34655					0.011427883081637447
LLGSKPLP	8	Unmodified	_LLGSKPLP_					0	0	0			REV__nc|ENSG00000128596|Q96JN2-2|CCDC136	REV__nc|ENSG00000128596|Q96JN2-2|CCDC136	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7672424316406	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.86288	1	2583	2583		26.796	0	1	795210	+		30415	29832	20233	20243	34657	34657					0.09792178253815109
LLGSLFQVY	9	Unmodified	_LLGSLFQVY_					0	0	0			REV__nc|ENSG00000136205|Q68CZ2-4|TNS3	REV__nc|ENSG00000136205|Q68CZ2-4|TNS3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.2576904296875	2	520.294768	1038.57498	1.8035	0.00093835	-2.3179	-0.001206	-0.51436	-0.00026762	520.2934131692775	94.524	0.52066	94.957	94.801	95.322	0.4324					18	11	2	0	0	0	0.20789	1	11288	11288		57.811	13.694	1	223710	+		30416	19294	20234	20244	34658	34658					0.057238151084447964
LLGSLTLLP	9	Unmodified	_LLGSLTLLP_					0	0	0		ENST00000346872.7_2_17:37921598-37921754:-|nuORF	ENST00000346872.7_2_17:37921598-37921754:-|nuORF	ENST00000346872.7_2_17:37921598-37921754:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8009338378906	2	463.799686	925.584819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.299	1	46.27	45.77	46.77	-0.028782								0	0	0	0.27974	1	3797	3797		38.806	3.6054	1				30417	10312	20235	20245	34659	34659					0.11905003113804469
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7912292480469	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.69914	4	2625	2568;2591;2625;2704		40.573	7.7521	1	1012300	+		30418	30067	20236	20246	34660;34661;34662;34663	34662					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7917785644531	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.69914	6	2950	2877;2950;3106;3217;3262;3400		40.573	3.4135	1	759950	+		30419	30067	20236	20246	34664;34665;34666;34667;34668;34669	34665					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7917785644531	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.58151	3	3890	3890;3980;3991		47.916	9.1095	1	186860	+		30420	30067	20236	20246	34670;34671;34672	34670					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7906799316406	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.394	1	47.394	46.894	47.894	0								0	0	0	0.35186	1	3623	3623		47.916	14.4	1		+		30421	30067	20236	20246	34673	34673					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.792724609375	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.654	1	52.654	52.154	53.154	0								0	0	0	0.31828	1	4331	4331		24.203	4.8428	1		+		30422	30067	20236	20246	34674	34674					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79193115234375	2	456.791861	911.569169	-0.042653	-1.9484E-05	2.8269	0.0012913	2.7842	0.0012718	456.79307389883803	36.432	2.1584	36.413	35.42	37.578	-0.018673					171	47	5	0	0	0	0.62081	2	2271	2271;2440		45.952	1.2474	1	4460800	+		30423	30067	20236	20246	34675;34676	34675					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7929992675781	2	456.791861	911.569169	0.050318	2.2985E-05	2.6739	0.0012214	2.7242	0.0012444	456.7929831409672	38.348	1.1506	38.32	37.435	38.586	-0.027843					79	26	4	0	0	0	0.7932	2	2526	2526;2586		26.796	6.0902	1	1618700	+		30424	30067	20236	20246	34677;34678	34677					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79241943359375	2	456.791861	911.569169	0.10619	4.8505E-05	2.6551	0.0012128	2.7613	0.0012614	456.7929673289598	38.995	1.2001	38.965	38.494	39.694	-0.03027					96	27	4	0	0	0	0.77546	1	2733	2733		31.955	6.5047	1	2198500	+		30425	30067	20236	20246	34679	34679					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.78985595703125	2	456.791861	911.569169	0.18235	8.3295E-05	0.58937	0.00026922	0.77171	0.00035251	456.79200220887	40.258	1.2138	40.227	39.65	40.864	-0.030987					94	32	4	0	0	0	0.69914	2	2928	2917;2928		40.573	10.069	1	1159000	+		30426	30067	20236	20246	34680;34681	34681					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79046630859375	2	456.791861	911.569169	0.25783	0.00011777	1.2467	0.00056948	1.5045	0.00068725	456.79223981105497	41.505	1.1583	41.474	40.833	41.991	-0.030987					78	30	4	0	0	0	0.77546	1	3063	3063		31.955	1.4512	1	325120	+		30427	30067	20236	20246	34682	34682					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7909240722656	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.5393	3	3662	3223;3387;3662		50.025	9.4519	1	662040	+		30428	30067	20236	20246	34683;34684;34685	34685					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7931213378906	2	456.791861	911.569169	-1.0391	-0.00047467	3.9273	0.001794	2.8882	0.0013193	456.79357477476594	37.792	1.0999	37.741	37.317	38.417	-0.050373					69	24	4	0	0	0	0.76996	3	2591	2569;2591;2620		33.516	11.813	1	2264600	+		30429	30067	20236	20246	34686;34687;34688	34687					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7929992675781	2	456.791861	911.569169	-1.1724	-0.00053555	3.9802	0.0018181	2.8078	0.0012826	456.7935742947897	38.88	1.6337	38.833	37.942	39.576	-0.047001					120	37	4	0	0	0	0.69914	3	2818	2794;2818;2834		40.573	16.37	1	2323700	+		30430	30067	20236	20246	34689;34690;34691	34690					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7881164550781	2	456.791861	911.569169	-1.3117	-0.00059915	2.7647	0.0012629	1.4531	0.00066375	456.79301301178594	40.135	1.4029	40.092	39.45	40.853	-0.043697					111	34	4	0	0	0	0.58151	2	3007	2888;3007		47.916	15.961	1	1093900	+		30431	30067	20236	20246	34692;34693	34693					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.791748046875	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.76996	5	3024	3024;3289;3299;3323;3472		33.516	8.0654	1	652510	+		30432	30067	20236	20246	34694;34695;34696;34697;34698	34694					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7920837402344	2	456.791861	911.569169	-0.73784	-0.00033704	3.4705	0.0015853	2.7326	0.0012482	456.79333098184276	49.768	2.9671	49.744	48.401	51.368	-0.024029					154	74	4	0	0	0	0.69914	2	4298	4269;4298		40.573	15.122	1	161210	+		30433	30067	20236	20246	34699;34700	34700					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7906188964844	2	456.791861	911.569169	-1.09	-0.00049788	3.7703	0.0017222	2.6803	0.0012244	456.7935086768371	36.547	3.494	36.558	33.881	37.375	0.011173					215	79	5	0	0	0	0.74721	1	2294	2294		37.159	6.6555	1	4477500	+		30434	30067	20236	20246	34701	34701					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7928161621094	2	456.791861	911.569169	-1.4265	-0.00065161	4.1949	0.0019162	2.7684	0.0012646	456.7936601394385	37.79	2.3589	37.801	37.33	39.689	0.011173					114	54	4	0	0	0	0.76402	3	2612	2493;2543;2612		35.201	6.7195	1	2031500	+		30435	30067	20236	20246	34702;34703;34704	34704					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7923583984375	2	456.791861	911.569169	-1.4626	-0.0006681	4.253	0.0019428	2.7904	0.0012746	456.7937012430135	38.803	1.6993	38.814	37.946	39.646	0.011173					92	39	3	0	0	0	0.72402	2	2744	2744;2755		38.806	12.01	1	2267400	+		30436	30067	20236	20246	34705;34706	34705					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7914123535156	2	456.791861	911.569169	-1.2294	-0.00056156	2.5606	0.0011697	1.3313	0.00060812	456.79289004576646	40.059	1.2176	40.068	39.557	40.774	0.0092773					97	29	4	0	0	0	0.67235	3	2831	2792;2831;2890		42.474	11.971	1	1129600	+		30437	30067	20236	20246	34707;34708;34709	34708					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7894592285156	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.76996	4	2995	2995;3105;3676;3895		33.516	7.7521	1	608260	+		30438	30067	20236	20246	34710;34711;34712;34713	34710					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7897644042969	2	456.791861	911.569169	0.097545	4.4558E-05	2.5944	0.0011851	2.6919	0.0012296	456.7929552103287	47.98	1.1453	47.978	47.558	48.703	-0.002449					69	35	4	0	0	0	0.58151	2	3992	3985;3992		47.916	10.756	1	249160	+		30439	30067	20236	20246	34714;34715	34715					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7929382324219	2	456.791861	911.569169	-1.2516	-0.0005717	4.1535	0.0018973	2.9019	0.0013256	456.7936304493402	37.846	1.122	37.863	37.475	38.597	0.016563					101	34	4	0	0	0	0.76996	6	2212	2153;2194;2204;2212;2219;2229		33.516	10.786	1	1324300	+		30440	30067	20236	20246	34716;34717;34718;34719;34720;34721	34719					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7930603027344	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.69914	3	2294	2294;2303;2399		40.573	15.122	1	1834900	+		30441	30067	20236	20246	34722;34723;34724	34722					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7919921875	2	456.791861	911.569169	-1.2485	-0.0005703	3.083	0.0014083	1.8345	0.000838	456.7931433333729	40.143	1.4449	40.149	39.563	41.008	0.0065041					84	46	2	0	0	0	0.76996	2	2524	2490;2524		33.516	6.7195	1	1011500	+		30442	30067	20236	20246	34725;34726	34726					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7918395996094	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.69914	1	2873	2873		40.573	1.7665	1	548640	+		30443	30067	20236	20246	34727	34727					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7911071777344	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.555	1	45.567	45.067	46.067	0.012058								0	0	0	0.33301	1	3288	3288		19.36	0	1		+		30444	30067	20236	20246	34728	34728					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7912902832031	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.949	1	48.975	48.475	49.475	0.025574								0	0	0	0.30053	1	3758	3758		30.504	5.0535	1		+		30445	30067	20236	20246	34729	34729					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7915344238281	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.693	1	49.718	49.218	50.218	0.025574								0	0	0	0.29299	1	3860	3860		33.516	6.7195	1		+		30446	30067	20236	20246	34730	34730					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7915954589844	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.007	1	50.037	49.537	50.537	0.029629								0	0	0	0.30678	1	3903	3903		42.474	10.52	1		+		30447	30067	20236	20246	34731	34731					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7928771972656	2	456.791861	911.569169	0.19113	8.7308E-05	2.7762	0.0012681	2.9673	0.0013554	456.7929923736529	37.659	1.0878	37.758	37.313	38.401	0.099277					98	37	4	0	0	0	0.76996	6	2163	2127;2155;2163;2179;2189;2198		33.516	7.4361	1	1361500	+		30448	30067	20236	20246	34732;34733;34734;34735;34736;34737	34734					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7928771972656	2	456.791861	911.569169	0.19556	8.933E-05	2.7159	0.0012406	2.9114	0.0013299	456.79296638202106	38.11	0.49987	38.204	37.924	38.424	0.094318					45	16	3	0	0	0	0.76402	3	2232	2207;2232;2248		35.201	6.7195	1	1181300	+		30449	30067	20236	20246	34738;34739;34740	34739					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7923889160156	2	456.791861	911.569169	0.20144	9.2015E-05	2.7795	0.0012696	2.9809	0.0013616	456.79301419254114	38.74	1.332	38.834	38.396	39.728	0.094318					137	38	4	0	0	0	0.69914	3	2263	2263;2325;2390		40.573	10.069	1	1693200	+		30450	30067	20236	20246	34741;34742;34743	34741					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7917785644531	2	456.791861	911.569169	0.2125	9.7068E-05	1.796	0.00082039	2.0085	0.00091746	456.79255962893114	39.979	1.1329	40.06	39.42	40.553	0.081348					88	31	4	0	0	0	0.76996	1	2478	2478		33.516	6.7195	1	876000	+		30451	30067	20236	20246	34744	34744					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7906494140625	2	456.791861	911.569169	0.2225	0.00010163	1.2501	0.00057106	1.4726	0.00067269	456.79228647464913	41.052	1.411	41.126	40.545	41.956	0.073418					84	43	2	0	0	0	0.77546	1	2740	2740		31.955	0	1	319050	+		30452	30067	20236	20246	34745	34745					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79156494140625	2	456.791861	911.569169	0.23747	0.00010847	2.1705	0.00099146	2.408	0.0010999	456.79269786067573	42.365	2.4539	42.43	41.781	44.235	0.065037					168	63	3	0	0	0	0.69914	2	2848	2848;2856		40.573	7.057	1	556840	+		30453	30067	20236	20246	34746;34747	34746					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7912292480469	2	456.791861	911.569169	0.27011	0.00012339	2.3821	0.0010881	2.6523	0.0012115	456.79279371016634	46.303	1.4327	46.341	45.811	47.244	0.038181					69	39	2	0	0	0	0.76996	1	3341	3341		33.516	1.5607	1	172310	+		30454	30067	20236	20246	34748	34748					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7921447753906	2	456.791861	911.569169	0.30037	0.00013721	2.5195	0.0011509	2.8199	0.0012881	456.79289757972145	49.9	2.3678	49.942	48.602	50.969	0.04224					107	64	2	0	0	0	0.76996	2	3937	3926;3937		33.516	6.0902	1	208080	+		30455	30067	20236	20246	34749;34750	34750					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.791748046875	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.7932	1	2128	2128		25.45	7.1258	1	3452400	+		30456	30067	20236	20246	34751	34751					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7929992675781	2	456.791861	911.569169	0.032056	1.4643E-05	2.9264	0.0013367	2.9584	0.0013514	456.7930672355845	37.708	1.0507	37.65	37.238	38.288	-0.057915					86	33	4	0	0	0	0.76996	5	2158	2158;2166;2177;2185;2194		33.516	7.7521	1	1430300	+		30457	30067	20236	20246	34752;34753;34754;34755;34756	34752					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7913818359375	2	456.791861	911.569169	-0.0055701	-2.5444E-06	2.9863	0.0013641	2.9807	0.0013616	456.7931079883192	38.776	1.3461	38.723	38.257	39.603	-0.052731					134	39	4	0	0	0	0.76996	5	2400	2286;2341;2371;2389;2400		33.516	12.595	1	1653300	+		30458	30067	20236	20246	34757;34758;34759;34760;34761	34761					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7904357910156	2	456.791861	911.569169	-0.051128	-2.3355E-05	1.9525	0.00089189	1.9014	0.00086853	456.79265367527273	40.074	1.5514	40.027	39.34	40.891	-0.04789					131	49	4	0	0	0	0.76996	2	2468	2468;2479		33.516	8.0654	1	940180	+		30459	30067	20236	20246	34762;34763	34762					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7900695800781	2	456.791861	911.569169	-0.092831	-4.2405E-05	1.6943	0.00077396	1.6015	0.00073156	456.792474958444	41.251	1.138	41.206	40.614	41.752	-0.045471					60	36	2	0	0	0	0.76996	1	2742	2742		33.516	1.5607	1	309120	+		30460	30067	20236	20246	34764	34764					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7891845703125	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.7932	1	3017	3017		24.203	1.1603	1	605230	+		30461	30067	20236	20246	34765	34765					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7899475097656	2	456.791861	911.569169	-0.33572	-0.00015336	3.2284	0.0014747	2.8927	0.0013214	456.7932074772566	48.053	0.92106	47.96	47.562	48.483	-0.093182					45	24	2	0	0	0	0.7932	1	3610	3610		25.45	1.2474	1	254180	+		30462	30067	20236	20246	34766	34766					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7921447753906	2	456.791861	911.569169	-0.41733	-0.00019063	3.2307	0.0014758	2.8134	0.0012851	456.79324628175203	50.167	3.1243	50.075	48.485	51.609	-0.091797					154	81	3	0	0	0	0.69914	5	3872	3851;3872;3901;3914;3932		40.573	7.057	1	198490	+		30463	30067	20236	20246	34767;34768;34769;34770;34771	34768					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7922668457031	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.989	1	37.931	37.431	38.431	-0.057915								0	0	0	0.31472	1	2214	2214		25.45	7.1258	1		+		30464	30067	20236	20246	34772	34772					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7928161621094	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.344	1	38.286	37.786	38.786	-0.057915								0	0	0	0.2969	1	2262	2262		31.955	8.9124	1		+		30465	30067	20236	20246	34773	34773					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79083251953125	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.328	1	49.234	48.734	49.734	-0.093178								0	0	0	0.33301	1	3811	3811		19.36	0	1		+		30466	30067	20236	20246	34774	34774					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7931213378906	2	456.791861	911.569169	-0.16145	-7.375E-05	3.0967	0.0014145	2.9352	0.0013408	456.79315790298426	37.204	0.82482	37.517	36.88	37.705	0.31312					71	19	4	0	0	0	0.67235	3	2955	2918;2942;2955		42.474	7.2737	1	4730400	+		30467	30067	20236	20246	34775;34776;34777	34777					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7921142578125	2	456.791861	911.569169	-0.5708	-0.00026074	3.3989	0.0015526	2.8281	0.0012919	456.79332762585267	37.831	1.4155	38.144	37.663	39.079	0.31312					135	35	5	0	0	0	0.76996	4	3112	3112;3143;3155;3178		33.516	6.0902	1	9282000	+		30468	30067	20236	20246	34778;34779;34780;34781	34778					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7926940917969	2	456.791861	911.569169	-2.1986	-0.0010043	3.4286	0.0015662	1.23	0.00056186	456.7933193778514	39.928	2.2	40.296	39.048	41.248	0.36797					193	55	5	0	0	0	0.69914	4	3344	3319;3332;3344;3473		40.573	8.6178	1	10973000	+		30469	30067	20236	20246	34782;34783;34784;34785	34784					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7928771972656	2	456.791861	911.569169	0.90302	0.00041249	1.9801	0.00090447	2.8831	0.001317	456.792654311578	37.107	0.83018	37.593	36.916	37.747	0.48581					79	19	5	0	0	0	0.7932	2	2937	2937;2950		25.45	6.0902	1	4180400	+		30470	30067	20236	20246	34786;34787	34786					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7931213378906	2	456.791861	911.569169	0.14837	6.7774E-05	2.6615	0.0012157	2.8099	0.0012835	456.79297860960025	37.636	1.5872	38.122	37.704	39.291	0.48581					149	39	5	0	0	0	0.77546	2	2998	2998;3095		31.955	2.8053	1	8942200	+		30471	30067	20236	20246	34788;34789	34788					0.10984716596749422
LLGSLTLPV	9	Unmodified	_LLGSLTLPV_					0	0	0			REV__nc|ENSG00000179915|P58400-1|NRXN1	REV__nc|ENSG00000179915|P58400-1|NRXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79296875	2	456.791861	911.569169	-1.4135	-0.00064567	2.5195	0.0011509	1.106	0.00050522	456.7928761630725	39.835	2.0275	40.401	39.33	41.358	0.56588					154	50	4	0	0	0	0.67235	4	3301	3301;3385;3411;3479		42.474	6.7195	1	4024400	+		30472	30067	20236	20246	34790;34791;34792;34793	34790					0.10984716596749422
LLGSLVIN	8	Unmodified	_LLGSLVIN_					0	0	0			REV__ENST00000263708.6_1_2:120517455-120517605:+|nuORF	REV__ENST00000263708.6_1_2:120517455-120517605:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	414.7618408203125	2	414.763104	827.511654	-1.1711	-0.00048571	-2.0434	-0.00084752	-3.2144	-0.0013332	414.7622083520732	88.685	2.6185	88.685	88.073	90.692	0					180	60	5	0	0	0	0.87922	2	8594	8533;8594		42.474	1.4512	1	6770700	+		30473	24455	20237	20247	34794;34795	34795					0.09099874391176854
LLGSLVIN	8	Unmodified	_LLGSLVIN_					0	0	0			REV__ENST00000263708.6_1_2:120517455-120517605:+|nuORF	REV__ENST00000263708.6_1_2:120517455-120517605:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	414.76165771484375	2	414.763104	827.511654	0.62314	0.00025846	-3.9205	-0.0016261	-3.2973	-0.0013676	414.7614350932437	88.34	2.6941	88.491	87.941	90.635	0.15054					199	63	6	0	0	0	0.91005	1	8755	8755		42.474	0	1	10002000	+		30474	24455	20237	20247	34796	34796					0.09099874391176854
LLGSLVIN	8	Unmodified	_LLGSLVIN_					0	0	0			REV__ENST00000263708.6_1_2:120517455-120517605:+|nuORF	REV__ENST00000263708.6_1_2:120517455-120517605:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.76171875	2	414.763104	827.511654	1.2689	0.00052628	-4.3284	-0.0017953	-3.0596	-0.001269	414.7612423593211	88.129	2.1347	88.578	88.017	90.152	0.44893					145	51	4	0	0	0	0.884	1	10370	10370		33.516	0	1	6571000	+		30475	24455	20237	20247	34797	34797					0.09099874391176854
LLGSPAAAL	9	Unmodified	_LLGSPAAAL_					0	0	0		nc|ENSG00000100095|Q9BYH1-5|SEZ6L;nc|ENSG00000100095|Q9BYH1-4|SEZ6L;nc|ENSG00000100095|Q9BYH1-7|SEZ6L;nc|ENSG00000100095|Q9BYH1-6|SEZ6L;ENSG00000100095|ENST00000248933|SEZ6L	nc|ENSG00000100095|Q9BYH1-5|SEZ6L	nc|ENSG00000100095|Q9BYH1-5|SEZ6L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.78509521484375	2	406.747453	811.480354	-0.92408	-0.00037587	4.3252	0.0017593	3.4011	0.0013834	406.7492798484402	36.832	1.5235	36.779	35.79	37.314	-0.053558					54	33	2	0	0	0	0.20789	1	2351	2351		25.45	0	1	99446			30476	1795	20238	20248	34798	34798					0.06707301357084816
LLGSPAAAL	9	Unmodified	_LLGSPAAAL_					0	0	0		nc|ENSG00000100095|Q9BYH1-5|SEZ6L;nc|ENSG00000100095|Q9BYH1-4|SEZ6L;nc|ENSG00000100095|Q9BYH1-7|SEZ6L;nc|ENSG00000100095|Q9BYH1-6|SEZ6L;ENSG00000100095|ENST00000248933|SEZ6L	nc|ENSG00000100095|Q9BYH1-5|SEZ6L	nc|ENSG00000100095|Q9BYH1-5|SEZ6L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.29632568359375	2	406.747453	811.480354	-0.095972	-3.9036E-05	3.413	0.0013882	3.317	0.0013492	406.74903682634323	36.573	1.2199	36.513	35.857	37.077	-0.060337					53	34	2	0	0	0	0.20789	1	2091	2091		20.482	3.1169	1	77615			30477	1795	20238	20248	34799	34799					0.06707301357084816
LLGSPGRR	8	Unmodified	_LLGSPGRR_					0	0	0		ENSG00000150768|ENST00000280346|DLAT	ENSG00000150768|ENST00000280346|DLAT	ENSG00000150768|ENST00000280346|DLAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2616271972656	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.86288	1	9327	9327		26.796	0	1	52688000			30478	5084	20239	20249	34800	34800					0.07556044057048439
LLGSPGRR	8	Unmodified	_LLGSPGRR_					0	0	0		ENSG00000150768|ENST00000280346|DLAT	ENSG00000150768|ENST00000280346|DLAT	ENSG00000150768|ENST00000280346|DLAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2615661621094	2	428.261594	854.508634	-1.8497	-0.00079216	1.9562	0.00083775	0.10645	4.5588E-05	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.87922	1	9105	9105		31.955	0	1	31323000			30479	5084	20239	20249	34801	34801					0.07556044057048439
LLGSPVVQ	8	Unmodified	_LLGSPVVQ_					0	0	0			REV__ENSG00000101544|ENST00000262198|ADNP2	REV__ENSG00000101544|ENST00000262198|ADNP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2579650878906	2	406.747453	811.480354	-0.003679	-1.4964E-06	3.966	0.0016132	3.9623	0.0016117	406.74906373292623	48.035	2.1545	48.026	47.714	49.868	-0.0093269					94	53	2	0	0	0	0.4196	1	4048	4048		29.15	10.825	1	203230	+		30480	17288	20240	20250	34802	34802					0.06707301357096185
LLGSRIWVGY	10	Unmodified	_LLGSRIWVGY_					0	0	0		ENST00000301785.5_1_11:62481247-62481610:-|nuORF	ENST00000301785.5_1_11:62481247-62481610:-|nuORF	ENST00000301785.5_1_11:62481247-62481610:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.353515625	2	582.332216	1162.64988	-0.84551	-0.00049236	3.8605	0.0022481	3.015	0.0017557	582.3342480482016	104.14	0.12721	104.14	104.03	104.16	-0.0035706					4	2	2	0	0	0	0.37624	1	11217	11217		29.15	6.1071	1	42447			30481	9811	20241	20251	34803	34803					0.07505997639668749
LLGSRREL	8	Unmodified	_LLGSRREL_					0	0	0		ENST00000445086.6_1_11:6500115-6502550:-|nuORF;ENST00000529847.1_1_11:6501462-6502550:-|nuORF	ENST00000445086.6_1_11:6500115-6502550:-|nuORF	ENST00000445086.6_1_11:6500115-6502550:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28515625	2	472.287808	942.561064	0.77593	0.00036646	0.26532	0.00012531	1.0412	0.00049177	472.2881320540842	102.18	1.2251	102.32	101.72	102.94	0.13523					57	29	3	0	0	0	0.86791	1	10772	10772		28.254	0	1	404720			30482	11819	20242	20252	34804	34804					0.08748582400005489
LLGSRRLQRER	11	Unmodified	_LLGSRRLQRER_					0	0	0			REV__ENSG00000184261|ENST00000327876|KCNK12	REV__ENSG00000184261|ENST00000327876|KCNK12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.9483947753906	3	461.947898	1382.82186	2.7816	0.001285	-1.4036	-0.0006484	1.378	0.00063656	461.9469837881941	105.01	2.6422	104.97	104.37	107.01	-0.04039					189	62	6	0	0	0	0.74022	1	11562	11562		24.232	7.0651	1	910570	+		30483	22658	20243	20253	34805	34805					0.14576542379859347
LLGSSLRFVVF	11	Unmodified	_LLGSSLRFVVF_					0	0	0			REV__ENST00000308086.2_1_12:72057485-72057791:+|nuORF	REV__ENST00000308086.2_1_12:72057485-72057791:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.3722534179688	2	619.368798	1236.72304	1.27	0.0007866	3.6702	0.0022732	4.9402	0.0030598	619.3710394706492	101.41	0.94493	101.61	101.32	102.26	0.2058					77	22	4	0	0	0	0.7434	1	10657	10657		23.523	3.5259	1	2074300	+		30484	24858	20244	20254	34806	34806					0.11415126362271621
LLGSVAVLCV	10	Unmodified	_LLGSVAVLCV_					0	0	0		nc|ENSG00000204852|Q2MV58-5|TCTN1	nc|ENSG00000204852|Q2MV58-5|TCTN1	nc|ENSG00000204852|Q2MV58-5|TCTN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.29278564453125	2	487.291171	972.567789	1.5746	0.00076728	2.5881	0.0012611	4.1627	0.0020284	487.2923164445536	91.172	2.4399	91.105	90.562	93.002	-0.067093					137	58	3	0	0	0	0.86201	1	9638	9638		24.203	0	1	2352400			30485	15214	20245	20255	34807	34807					0.08040759236359918
LLGSVIFVY	9	Unmodified	_LLGSVIFVY_					0	0	0		nc|ENSG00000118432|P21554-2|CNR1;nc|ENSG00000118432|P21554-3|CNR1;ENSG00000118432|ENST00000369501|CNR1	nc|ENSG00000118432|P21554-2|CNR1	nc|ENSG00000118432|P21554-2|CNR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.80242919921875	2	505.799686	1009.58482	1.7224	0.00087119	2.6336	0.0013321	4.356	0.0022033	505.8012382419532	105.78	0.40895	105.91	105.66	106.07	0.12742					16	10	2	0	0	0	0.7932	1	12902	12902		26.796	3.7536	1	91117			30486	3029	20246	20256	34808	34808					0.08041003113817169
LLGSVLPLT	9	Unmodified	_LLGSVLPLT_					0	0	0			REV__ENST00000412686.5_1_7:99037063-99040649:+|nuORF	REV__ENST00000412686.5_1_7:99037063-99040649:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7908630371094	2	456.791861	911.569169	-0.73784	-0.00033704	3.4705	0.0015853	2.7326	0.0012482	456.79333098184276	49.768	2.9671	49.744	48.401	51.368	-0.024029					154	74	4	0	0	0	0.7932	1	4323	4323		24.203	4.8428	1	161210	+		30487	26386	20247	20257	34809	34809					0.10984716596760791
LLGSVLPLT	9	Unmodified	_LLGSVLPLT_					0	0	0			REV__ENST00000412686.5_1_7:99037063-99040649:+|nuORF	REV__ENST00000412686.5_1_7:99037063-99040649:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.792236328125	2	456.791861	911.569169	-2.1986	-0.0010043	3.4286	0.0015662	1.23	0.00056186	456.7933193778514	39.928	2.2	40.296	39.048	41.248	0.36797					193	55	5	0	0	0	0.76996	1	3284	3284		33.516	1.5607	1	10973000	+		30488	26386	20247	20257	34810	34810					0.10984716596760791
LLGSVQALSFV	11	Unmodified	_LLGSVQALSFV_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3301391601562	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.638	3	9036	9036;9072;9276		40.058	8.1047	1	11042000	+		30489	16482	20248	20258	34811;34812;34813	34811					0.08819158199935373
LLGSVQALSFV	11	Unmodified	_LLGSVQALSFV_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.330078125	2	567.331882	1132.64921	-0.468	-0.00026551	-2.8933	-0.0016415	-3.3613	-0.001907	567.330130226139	95.712	2.0668	95.712	95.357	97.424	0					107	47	3	0	0	0	0.51007	1	9544	9544		51.193	5.2204	1	608220	+		30490	16482	20248	20258	34814	34814					0.08819158199935373
LLGSVQALSFV	11	Unmodified	_LLGSVQALSFV_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.329833984375	2	567.331882	1132.64921	-1.2007	-0.00068122	-1.9524	-0.0011076	-3.1531	-0.0017889	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.70737	2	9317	9317;9430		30.318	1.1477	1	5763000	+		30491	16482	20248	20258	34815;34816	34815					0.08819158199935373
LLGSVQALSFV	11	Unmodified	_LLGSVQALSFV_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3300170898438	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.61369	2	9561	9489;9561		42.864	10.052	1	15673000	+		30492	16482	20248	20258	34817;34818	34818					0.08819158199935373
LLGSVQALSFV	11	Unmodified	_LLGSVQALSFV_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.331882	1132.64921	0.48094	0.00027285	-3.8594	-0.0021896	-3.3785	-0.0019167	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.72106	1	8933	8933		28.081	1.3886	1	6590100	+		30493	16482	20248	20258	34819	34819					0.08819158199935373
LLGSVQALSFV	11	Unmodified	_LLGSVQALSFV_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3301391601562	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.66929	2	9629	9629;9641		36.447	3.6962	1	18558000	+		30494	16482	20248	20258	34820;34821	34820					0.08819158199935373
LLGSVQALSFV	11	Unmodified	_LLGSVQALSFV_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3296508789062	2	567.331882	1132.64921	0.77491	0.00043963	-4.0071	-0.0022734	-3.2322	-0.0018337	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.65746	1	9043	9043		37.812	0.65241	1	6344600	+		30495	16482	20248	20258	34822	34822					0.08819158199935373
LLGSVQALSFV	11	Unmodified	_LLGSVQALSFV_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3302001953125	2	567.331882	1132.64921	-1.3957	-0.00079181	-1.9666	-0.0011157	-3.3623	-0.0019075	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.69995	1	8855	8855		31.53	3.6476	1	5956400	+		30496	16482	20248	20258	34823	34823					0.08819158199935373
LLGSVQALSFV	11	Unmodified	_LLGSVQALSFV_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3287353515625	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.66009	2	9526	9526;9549		37.508	7.0045	1	17338000	+		30497	16482	20248	20258	34824;34825	34824					0.08819158199935373
LLGSVQALSFV	11	Unmodified	_LLGSVQALSFV_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3291625976562	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.7434	1	11253	11253		23.523	0.48021	1	6007000	+		30498	16482	20248	20258	34826	34826					0.08819158199935373
LLGSYTALLVM	11	Unmodified	_LLGSYTALLVM_					0	0	0		ENSG00000171014|ENST00000307033|OR4D5	ENSG00000171014|ENST00000307033|OR4D5	ENSG00000171014|ENST00000307033|OR4D5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8663940429688	2	590.835942	1179.65733	0.89154	0.00052676	-3.4378	-0.0020312	-2.5463	-0.0015044	590.8339648561994	103.22	0.19198	103.35	103.21	103.4	0.12622					7	4	3	0	0	0	0.17529	1	10907	10907		26.693	0	1	165480			30499	6632	20249	20259	34827	34827					0.07468969125034164
LLGTALWPL	9	Unmodified	_LLGTALWPL_					0	0	0			REV__nc|ENSG00000288702|P35503-3|UGT1A3	REV__nc|ENSG00000288702|P35503-3|UGT1A3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.2971496582031	2	492.299853	982.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.525	1	74.57	74.07	75.07	0.04509								0	0	0	0.27974	1	7216	7216		38.806	3.6541	1		+		30500	30291	20250	20260	34828	34828					0.09316422833660454
LLGTASRAVSA	11	Unmodified	_LLGTASRAVSA_					0	0	0		ENST00000477171.1_1_3:152017207-152017282:+|nuORF	ENST00000477171.1_1_3:152017207-152017282:+|nuORF	ENST00000477171.1_1_3:152017207-152017282:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3043823242188	2	523.303655	1044.59276	2.1374	0.0011185	-1.9743	-0.0010331	0.16314	8.5373E-05	523.3025163753626	100.8	0.70826	101.1	100.73	101.44	0.2999					53	17	4	0	0	0	0.62614	1	12210	12210		41.427	4.9799	1	971240			30501	12354	20251	20261	34829	34829					0.07224530363305348
LLGTASRAVSA	11	Unmodified	_LLGTASRAVSA_					0	0	0		ENST00000477171.1_1_3:152017207-152017282:+|nuORF	ENST00000477171.1_1_3:152017207-152017282:+|nuORF	ENST00000477171.1_1_3:152017207-152017282:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	523.303655	1044.59276	-1.5391	-0.00080541	1.4702	0.00076938	-0.068846	-3.6027E-05	523.3043023099639	101.12	1.2429	101.28	100.84	102.08	0.15505	0.016998	0.0025244	NaN	41.427	68	30	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	825170			30502	12354	20251	20261							0.07224530363305348
LLGTEPDLT	9	Unmodified	_LLGTEPDLT_					0	0	0			REV__ENSG00000261150|ENST00000615648|EPPK1	REV__ENSG00000261150|ENST00000615648|EPPK1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9743957519531	2	479.758215	957.501877	-0.7953	-0.00038155	1.7122	0.00082146	0.91694	0.00043991	479.75889137645663	46.655	0.71327	46.626	46.312	47.025	-0.028782					25	16	2	0	0	0	0.20789	1	3821	3821		10.866	0	1	190400	+		30503	23941	20252	20262	34830	34830					0.02142641595139594
LLGTEPVP	8	Unmodified	_LLGTEPVP_					0	0	0			REV__nc|ENSG00000135114|Q15646-2|OASL	REV__nc|ENSG00000135114|Q15646-2|OASL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.23748779296875	2	413.239461	824.46437	-0.18778	-7.7597E-05	-2.7175	-0.001123	-2.9053	-0.0012006	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.87276	1	7232	7232		29.842	0	1	1747900	+		30504	29862	20253	20263	34831	34831					0.045115951201864846
LLGTGPALGRG	11	Unmodified	_LLGTGPALGRG_					0	0	0		ENSG00000163704|ENST00000412055|PRRT3;nc|ENSG00000163704|Q5FWE3-3|PRRT3	ENSG00000163704|ENST00000412055|PRRT3	ENSG00000163704|ENST00000412055|PRRT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30078125	2	506.300916	1010.58728	0.76933	0.00038951	-0.62293	-0.00031539	0.1464	7.4122E-05	506.30057654183594	96.316	1.2031	96.479	95.934	97.138	0.16317					64	27	3	0	0	0	0.69995	1	9940	9940		31.53	0	1	470040			30505	5856	20254	20264	34832	34832					0.0824085157147465
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796325683594	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.76996	1	3765	3765		33.516	8.0654	1	2468400			30506	6247	20255	20265	34833	34833					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7798767089844	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.325	1	66.29	65.79	66.79	-0.035217								0	0	0	0.31472	1	6339	6339		25.45	7.1258	1				30507	6247	20255	20265	34834	34834					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7797546386719	2	434.778754	867.542954	0.085891	3.7343E-05	2.526	0.0010983	2.6119	0.0011356	434.77973178522114	39.697	1.6335	39.706	39.141	40.774	0.0092812					137	39	4	0	0	0	0.76996	1	2941	2941		33.516	6.7195	1	4100400			30508	6247	20255	20265	34835	34835					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77984619140625	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.5393	1	3499	3499		50.025	18.07	1	2165200			30509	6247	20255	20265	34836	34836					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77960205078125	2	434.778754	867.542954	-1.6369	-0.00071169	4.2666	0.001855	2.6297	0.0011433	434.7804825082367	43.238	1.5673	43.244	42.525	44.093	0.0057526					133	41	4	0	0	0	0.76996	1	3027	3027		33.516	1.5607	1	2391100			30510	6247	20255	20265	34837	34837					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77935791015625	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.76996	1	3322	3322		33.516	5.2613	1	1177900			30511	6247	20255	20265	34838	34838					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77978515625	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.76996	2	3729	3564;3729		33.516	6.0902	1	1959200			30512	6247	20255	20265	34839;34840	34840					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7800598144531	2	434.778754	867.542954	0.17139	7.4517E-05	3.201	0.0013917	3.3724	0.0014663	434.7800235008866	37.854	1.477	37.948	37.639	39.116	0.094318					162	48	4	0	0	0	0.72402	2	2237	2237;2247		38.806	3.6054	1	2203700			30513	6247	20255	20265	34841;34842	34841					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7797546386719	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.78058	1	2780	2780		30.504	0.6621	1	2513700			30514	6247	20255	20265	34843	34843					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77978515625	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.76996	2	2903	2903;3004		33.516	6.7195	1	2537300			30515	6247	20255	20265	34844;34845	34844					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.76996	2	3437	3437;3550		33.516	8.0654	1	2750200			30516	6247	20255	20265	34846;34847	34846					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78033447265625	2	434.778754	867.542954	0.083396	3.6259E-05	3.2514	0.0014137	3.3348	0.0014499	434.78005466270537	34.317	1.0002	34.271	33.763	34.763	-0.045815					125	41	4	0	0	0	0.76996	1	1743	1743		33.516	1.5607	1	3033400			30517	6247	20255	20265	34848	34848					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7800598144531	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.49378	2	2305	2269;2305		52.299	2.5004	1	2486400			30518	6247	20255	20265	34849;34850	34850					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7796630859375	2	434.778754	867.542954	-0.23402	-0.00010175	2.835	0.0012326	2.601	0.0011308	434.77987896985167	43.157	1.7547	43.107	42.38	44.135	-0.050308					136	44	4	0	0	0	0.76996	1	3020	3020		33.516	6.7195	1	2479900			30519	6247	20255	20265	34851	34851					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77978515625	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.69914	1	3723	3723		40.573	7.057	1	2175000			30520	6247	20255	20265	34852	34852					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7795104980469	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.69914	2	3842	3698;3842		40.573	6.7195	1	6567600			30521	6247	20255	20265	34853;34854	34854					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77960205078125	2	434.778754	867.542954	-0.86763	-0.00037723	3.3995	0.001478	2.5319	0.0011008	434.78009785486137	45.83	1.5338	46.301	45.603	47.137	0.47139					107	37	4	0	0	0	0.76996	1	4353	4353		33.516	8.0654	1	3309700			30522	6247	20255	20265	34855	34855					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7804870605469	2	434.778754	867.542954	1.7459	0.00075909	2.0876	0.00090764	3.8335	0.0016667	434.7795583562852	36.032	2.5113	36.473	35.233	37.744	0.44043					149	62	4	0	0	0	0.76996	1	2803	2803		33.516	6.7195	1	9979000			30523	6247	20255	20265	34856	34856					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78057861328125	2	434.778754	867.542954	0.24981	0.00010861	3.5134	0.0015276	3.7632	0.0016362	434.78017285768743	37.739	1.2173	38.259	37.943	39.16	0.51989					114	30	4	0	0	0	0.76996	1	3097	3097		33.516	5.2613	1	8689200			30524	6247	20255	20265	34857	34857					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.780029296875	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.72402	1	3691	3691		38.806	10.552	1	6824500			30525	6247	20255	20265	34858	34858					0.10388447425270897
LLGTLLPAA	9	Unmodified	_LLGTLLPAA_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.9086	-0.00082983	5.2742	0.0022931	3.3655	0.0014633	434.78092970188624	37.866	1.5403	37.866	37.483	39.024	0	-0.036262	0.0013073	NaN	52.299	133	37	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2455800			30526	6247	20255	20265							0.10388447425270897
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.79217529296875	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.72402	1	2602	2602		38.806	3.6054	1	1012300			30527	6678	20256	20266	34859	34859					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7909851074219	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.74721	2	2774	2774;2899		37.159	5.2042	1	759950			30528	6678	20256	20266	34860;34861	34860					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7923278808594	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.458	1	47.458	46.958	47.958	0								0	0	0	0.30053	1	3632	3632		30.504	3.7075	1				30529	6678	20256	20266	34862	34862					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79315185546875	2	456.791861	911.569169	-0.042653	-1.9484E-05	2.8269	0.0012913	2.7842	0.0012718	456.79307389883803	36.432	2.1584	36.413	35.42	37.578	-0.018673					171	47	5	0	0	0	0.47272	3	2392	2307;2319;2392		53.351	12.162	1	4460800			30530	6678	20256	20266	34863;34864;34865	34865					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7927551269531	2	456.791861	911.569169	0.10619	4.8505E-05	2.6551	0.0012128	2.7613	0.0012614	456.7929673289598	38.995	1.2001	38.965	38.494	39.694	-0.03027					96	27	4	0	0	0	0.78536	1	2709	2709		29.15	2.3535	1	2198500			30531	6678	20256	20266	34866	34866					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7912902832031	2	456.791861	911.569169	0.18235	8.3295E-05	0.58937	0.00026922	0.77171	0.00035251	456.79200220887	40.258	1.2138	40.227	39.65	40.864	-0.030987					94	32	4	0	0	0	0.72402	1	2823	2823		38.806	6.8513	1	1159000			30532	6678	20256	20266	34867	34867					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7931213378906	2	456.791861	911.569169	-0.85953	-0.00039263	3.5719	0.0016316	2.7123	0.001239	456.7934335420697	36.323	3.5767	36.267	33.824	37.401	-0.055901					213	80	5	0	0	0	0.62081	1	2416	2416		45.952	7.1458	1	4833100			30533	6678	20256	20266	34868	34868					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7926025390625	2	456.791861	911.569169	-1.1724	-0.00053555	3.9802	0.0018181	2.8078	0.0012826	456.7935742947897	38.88	1.6337	38.833	37.942	39.576	-0.047001					120	37	4	0	0	0	0.76255	1	2639	2639		35.618	0	1	2323700			30534	6678	20256	20266	34869	34869					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7910461425781	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.74721	2	3128	3128;3489		37.159	6.6555	1	652510			30535	6678	20256	20266	34870;34871	34870					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79296875	2	456.791861	911.569169	-1.09	-0.00049788	3.7703	0.0017222	2.6803	0.0012244	456.7935086768371	36.547	3.494	36.558	33.881	37.375	0.011173					215	79	5	0	0	0	0.47272	2	2352	2352;2467		53.351	12.779	1	4477500			30536	6678	20256	20266	34872;34873	34872					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79180908203125	2	456.791861	911.569169	-1.2294	-0.00056156	2.5606	0.0011697	1.3313	0.00060812	456.79289004576646	40.059	1.2176	40.068	39.557	40.774	0.0092773					97	29	4	0	0	0	0.78058	1	2867	2867		30.504	5.0535	1	1129600			30537	6678	20256	20266	34874	34874					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79266357421875	2	456.791861	911.569169	-1.2516	-0.0005717	4.1535	0.0018973	2.9019	0.0013256	456.7936304493402	37.846	1.122	37.863	37.475	38.597	0.016563					101	34	4	0	0	0	0.7932	1	2244	2244		24.203	1.1603	1	1324300			30538	6678	20256	20266	34875	34875					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7928771972656	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.7932	1	2286	2286		24.203	1.1603	1	1834900			30539	6678	20256	20266	34876	34876					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7921447753906	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.78058	1	2864	2864		30.504	3.7075	1	548640			30540	6678	20256	20266	34877	34877					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7921447753906	2	456.791861	911.569169	-1.2333	-0.00056338	4.0313	0.0018415	2.798	0.0012781	456.7936682043714	47.882	1.0561	47.904	47.537	48.594	0.02227					51	31	2	0	0	0	0.7932	1	3602	3602		18.324	3.6603	1	161170			30541	6678	20256	20266	34878	34878					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.791748046875	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.087	1	50.117	49.617	50.617	0.029629								0	0	0	0.33559	1	3914	3914		45.952	5.3793	1				30542	6678	20256	20266	34879	34879					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7933044433594	2	456.791861	911.569169	0.17991	8.2183E-05	2.7362	0.0012499	2.9161	0.001332	456.7930101461281	36.153	2.2506	36.256	35.136	37.386	0.10306					210	68	4	0	0	0	0.62081	3	2009	1966;2009;2103		45.952	7.1458	1	3531000			30543	6678	20256	20266	34880;34881;34882	34881					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7922668457031	2	456.791861	911.569169	0.2125	9.7068E-05	1.796	0.00082039	2.0085	0.00091746	456.79255962893114	39.979	1.1329	40.06	39.42	40.553	0.081348					88	31	4	0	0	0	0.77546	1	2490	2490		31.955	5.1588	1	876000			30544	6678	20256	20266	34883	34883					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7930908203125	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.76255	1	1964	1964		35.618	3.6634	1	3452400			30545	6678	20256	20266	34884	34884					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79144287109375	2	456.791861	911.569169	-0.33572	-0.00015336	3.2284	0.0014747	2.8927	0.0013214	456.7932074772566	48.053	0.92106	47.96	47.562	48.483	-0.093182					45	24	2	0	0	0	0.77546	1	3626	3626		31.955	1.4512	1	254180			30546	6678	20256	20266	34885	34885					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79327392578125	2	456.791861	911.569169	-0.077665	-3.5477E-05	3.236	0.0014782	3.1584	0.0014427	456.79322700683537	35.356	1.7647	35.603	35.091	36.856	0.24769					159	44	4	0	0	0	0.62081	4	2707	2673;2683;2707;2817		45.952	5.0535	1	6766600			30547	6678	20256	20266	34886;34887;34888;34889	34888					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7931823730469	2	456.791861	911.569169	-0.5708	-0.00026074	3.3989	0.0015526	2.8281	0.0012919	456.79332762585267	37.831	1.4155	38.144	37.663	39.079	0.31312					135	35	5	0	0	0	0.47272	2	3026	3014;3026		53.351	16.192	1	9282000			30548	6678	20256	20266	34890;34891	34891					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7933044433594	2	456.791861	911.569169	1.3225	0.00060413	1.789	0.00081719	3.1115	0.0014213	456.79255750887523	35.219	1.7546	35.6	35.098	36.853	0.3812					157	44	4	0	0	0	0.31972	1	2678	2678		63.306	15.391	1	7423700			30549	6678	20256	20266	34892	34892					0.10984716596749422
LLGTLLVSP	9	Unmodified	_LLGTLLVSP_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7930603027344	2	456.791861	911.569169	0.14837	6.7774E-05	2.6615	0.0012157	2.8099	0.0012835	456.79297860960025	37.636	1.5872	38.122	37.704	39.291	0.48581					149	39	5	0	0	0	0.62081	3	3032	3010;3021;3032		45.952	7.1458	1	8942200			30550	6678	20256	20266	34893;34894;34895	34895					0.10984716596749422
LLGTLVPN	8	Unmodified	_LLGTLVPN_					0	0	0			REV__ENST00000302085.8_2_4:146403097-146435610:+|nuORF	REV__ENST00000302085.8_2_4:146403097-146435610:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2381591796875	2	413.755278	825.496004	-0.064161	-2.6547E-05	0.62079	0.00025685	0.55663	0.00023031	413.75542961978573	75.734	0.45364	76.302	76.103	76.557	0.56836					14	10	2	0	0	0	0.4196	1	8643	8643		45.952	13.997	1	121900	+		30551	24777	20257	20267	34896	34896					0.07627587874139863
LLGTNQSH	8	Unmodified	_LLGTNQSH_					0	0	0			REV__ENSG00000078814|ENST00000262873|MYH7B	REV__ENSG00000078814|ENST00000262873|MYH7B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	435.227417	868.44028	1.7608	0.00076634	1.7441	0.00075906	3.5049	0.0015254	435.23060661361916	36.495	0.24787	36.936	36.745	36.992	0.44043					7	5	2	0	0	0	0.4196	1	2876	2876		50.025	5.9077	1	32943	+		30552	16773	20258	20268	34897	34897					0.0007975468653285134
LLGTRPAR	8	Unmodified	_LLGTRPAR_					0	0	0			REV__nc|ENSG00000101400|Q13424-2|SNTA1	REV__nc|ENSG00000101400|Q13424-2|SNTA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.26568603515625	2	442.277244	882.539935	0.71058	0.00031427	-3.8548	-0.0017049	-3.1442	-0.0013906	442.27581888016255	37.508	0.56047	37.994	37.577	38.138	0.48581					19	13	2	0	0	0	0.4196	1	3027	3027		31.955	0	1	51695	+		30553	17276	20259	20269	34898	34898					0.09396617091124426
LLGTTIVRST	10	Unmodified	_LLGTTIVRST_					0	0	0			REV__ENST00000559567.1_15:82970936-82972253:+|nuORF	REV__ENST00000559567.1_15:82970936-82972253:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.820556640625	2	530.821681	1059.62881	-0.034622	-1.8378E-05	-1.4405	-0.00076466	-1.4751	-0.00078304	530.820933749492	80.358	1.1642	80.42	79.976	81.14	0.062225					91	34	3	0	0	0	0.8651	1	7874	7874		25.574	7.2496	1	600980	+		30554	28748	20260	20270	34899	34899					0.10137987540133508
LLGTTPPPS	9	Unmodified	_LLGTTPPPS_					0	0	0			REV__ENST00000409870.1_1_2:191045641-191045836:+|nuORF	REV__ENST00000409870.1_1_2:191045641-191045836:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78826904296875	2	441.750193	881.485833	-0.43107	-0.00019043	3.1242	0.0013801	2.6931	0.0011897	441.75279712996155	37.912	0.49318	38.225	38.055	38.548	0.31312					15	12	2	0	0	0	0.20789	1	3091	3091		12.207	0	1	152420	+		30555	26357	20261	20271	34900	34900					0.04034980148901468
LLGTTPPPS	9	Unmodified	_LLGTTPPPS_					0	0	0			REV__ENST00000409870.1_1_2:191045641-191045836:+|nuORF	REV__ENST00000409870.1_1_2:191045641-191045836:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7879943847656	2	441.750193	881.485833	0.13305	5.8775E-05	2.2675	0.0010017	2.4005	0.0010604	441.7512047894606	37.944	0.11792	38.467	38.395	38.513	0.52236					4	2	2	0	0	0	0.20789	1	3103	3103		24.203	11.244	1	31383	+		30556	26357	20261	20271	34901	34901					0.04034980148901468
LLGTTSPLLP	10	Unmodified	_LLGTTSPLLP_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3091125488281	2	506.307875	1010.6012	0.34662	0.0001755	1.6254	0.00082296	1.972	0.00099845	506.81007684679236	49.469	1.8985	49.512	48.558	50.457	0.04224					78	46	2	0	0	0	0.86589	1	3782	3782		29.15	1.2673	1	315680	+		30557	17036	20262	20272	34902	34902					0.09632084279917308
LLGTTSPLLP	10	Unmodified	_LLGTTSPLLP_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3111572265625	2	506.307875	1010.6012	-0.22503	-0.00011393	2.1509	0.001089	1.9259	0.00097507	506.3089485725691	49.441	1.8113	49.348	48.371	50.182	-0.093182					75	43	2	0	0	0	0.86589	1	3856	3856		29.15	6.1071	1	253850	+		30558	17036	20262	20272	34903	34903					0.09632084279917308
LLGTTSPLLP	10	Unmodified	_LLGTTSPLLP_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3108215332031	2	506.307875	1010.6012	-0.62631	-0.00031711	3.637	0.0018415	3.0107	0.0015244	506.31007289516646	61.122	1.0995	61.13	60.064	61.164	0.0081215					63	39	2	0	0	0	0.86452	1	5304	5304		30.504	0	1	191720	+		30559	17036	20262	20272	34904	34904					0.09632084279917308
LLGTTVTF	8	Unmodified	_LLGTTVTF_					0	0	0		ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.6312561035156	2	426.247286	850.48002	-1.7079	-0.00072801	-1.1159	-0.00047565	-2.8238	-0.0012037	426.24667246847054	84.753	2.7531	84.929	82.941	85.694	0.17561					128	63	4	0	0	0	0.4196	1	7983	7983		21.702	0	1	333510			30560	4791	20263	20273	34905	34905					0.04879881637248218
LLGTTVTF	8	Unmodified	_LLGTTVTF_					0	0	0		ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	426.247286	850.48002	-1.2267	-0.00052289	-1.5502	-0.00066077	-2.7769	-0.0011837	426.2464790159255	85.13	2.3842	85.13	83.442	85.826	0	0.11396	0.0011417	NaN	21.702	115	56	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	209770			30561	4791	20263	20273							0.04879881637248218
LLGTTVTF	8	Unmodified	_LLGTTVTF_					0	0	0		ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	426.247286	850.48002	-0.18234	-7.7722E-05	-2.7579	-0.0011756	-2.9403	-0.0012533	426.24597615527904	85.008	2.4334	85.076	83.424	85.857	0.067177	0.059268	0.00011208	NaN	21.702	102	55	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	282530			30562	4791	20263	20273							0.04879881637248218
LLGTTVTF	8	Unmodified	_LLGTTVTF_					0	0	0		ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	426.247286	850.48002	2.4263	0.0010342	-5.4242	-0.002312	-2.9979	-0.0012778	426.2448771398001	84.834	2.1355	84.894	83.541	85.677	0.05925	-0.12273	-0.0021609	NaN	21.702	88	48	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	351190			30563	4791	20263	20273							0.04879881637248218
LLGTTVTF	8	Unmodified	_LLGTTVTF_					0	0	0		ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	426.247286	850.48002	0.58969	0.00025135	-3.5521	-0.0015141	-2.9624	-0.0012627	426.2457021903155	84.835	2.4613	84.983	83.352	85.814	0.14811	-0.032901	-0.00056494	NaN	21.702	90	56	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	329650			30564	4791	20263	20273							0.04879881637248218
LLGTTVTF	8	Unmodified	_LLGTTVTF_					0	0	0		ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	426.247286	850.48002	-1.7424	-0.0007427	-1.2289	-0.00052381	-2.9713	-0.0012665	426.2466996526724	84.783	2.3033	84.933	83.363	85.666	0.14952	-0.083632	0.0014156	NaN	21.702	100	52	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	246720			30565	4791	20263	20273							0.04879881637248218
LLGTTVTF	8	Unmodified	_LLGTTVTF_					0	0	0		ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	426.247286	850.48002	-0.14789	-6.3038E-05	-2.3454	-0.0009997	-2.4932	-0.0010627	426.24607114092476	84.687	1.8174	85.127	83.922	85.74	0.43967	0.11089	0.0004638	NaN	21.702	73	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	221190			30566	4791	20263	20273							0.04879881637248218
LLGTTVTF	8	Unmodified	_LLGTTVTF_					0	0	0		ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	426.247286	850.48002	0.056194	2.3952E-05	-2.7352	-0.0011659	-2.679	-0.0011419	426.24600696500477	84.73	1.9412	85.177	83.801	85.742	0.44736	0.16094	0.00013146	NaN	21.702	73	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	277750			30567	4791	20263	20273							0.04879881637248218
LLGVGGVPI	9	Unmodified	_LLGVGGVPI_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.267578125	2	412.765646	823.516739	-0.098129	-4.0504E-05	0.66428	0.00027419	0.56615	0.00023369	412.7671463759069	51.656	3.1479	51.654	50.749	53.897	-0.0020447					128	83	2	0	0	0	0.78292	1	4390	4390		29.842	1.5873	1	180920			30568	4203	20264	20274	34906	34906					0.09792178253815109
LLGVGGVPI	9	Unmodified	_LLGVGGVPI_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7671813964844	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.78292	3	2561	2561;2573;2813		29.842	6.8048	1	2097300			30569	4203	20264	20274	34907;34908;34909	34907					0.09792178253815109
LLGVGGVPI	9	Unmodified	_LLGVGGVPI_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7670593261719	2	412.765646	823.516739	-1.8859	-0.00077844	3.9578	0.0016337	2.0719	0.00085522	412.7678129581843	48.855	3.3742	48.881	47.541	50.915	0.025574					176	94	2	0	0	0	0.72098	1	3692	3692		39.021	5.5059	1	621000			30570	4203	20264	20274	34910	34910					0.09792178253815109
LLGVGGVPI	9	Unmodified	_LLGVGGVPI_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2682800292969	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.78292	1	2858	2858		29.842	0	1	669780			30571	4203	20264	20274	34911	34911					0.09792178253815109
LLGVGGVPI	9	Unmodified	_LLGVGGVPI_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7667541503906	2	412.765646	823.516739	0.29216	0.00012059	0.97906	0.00040412	1.2712	0.00052472	412.7669032783796	51.677	2.3681	51.737	50.932	53.3	0.059719					122	72	2	0	0	0	0.72098	2	4067	4067;4101		39.021	0	1	250130			30572	4203	20264	20274	34912;34913	34912					0.09792178253815109
LLGVGGVPI	9	Unmodified	_LLGVGGVPI_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76708984375	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.416	1	37.515	37.015	38.015	0.099277								0	0	0	0.30219	1	2145	2145		29.842	4.3914	1				30573	4203	20264	20274	34914	34914					0.09792178253815109
LLGVGGVPI	9	Unmodified	_LLGVGGVPI_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7668151855469	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.78292	1	2135	2135		29.842	0	1	1619400			30574	4203	20264	20274	34915	34915					0.09792178253815109
LLGVGGVPI	9	Unmodified	_LLGVGGVPI_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2664794921875	2	412.765646	823.516739	-0.21056	-8.6912E-05	2.569	0.0010604	2.3584	0.00097348	412.76685422643334	40.116	1.6377	40.068	39.082	40.719	-0.04789					115	51	3	0	0	0	0.55559	1	2447	2447		49.211	10.189	1	699640			30575	4203	20264	20274	34916	34916					0.09792178253815109
LLGVGGVPI	9	Unmodified	_LLGVGGVPI_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.26690673828125	2	412.765646	823.516739	-0.42213	-0.00017424	3.8155	0.0015749	3.3934	0.0014007	412.76760423749965	45.997	3.0028	45.918	44.545	47.548	-0.079002					179	83	3	0	0	0	0.7932	1	3519	3519		21.702	0	1	731020			30576	4203	20264	20274	34917	34917					0.09792178253815109
LLGVGGVPI	9	Unmodified	_LLGVGGVPI_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	412.765646	823.516739	0.13156	5.4304E-05	1.685	0.00069551	1.8166	0.00074981	412.7669461076133	48.673	1.2121	49.14	48.625	49.837	0.46715	0.2158	-0.0013813	NaN	39.021	46	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	223850			30577	4203	20264	20274							0.09792178253815109
LLGVIFFKPLY	11	Unmodified	_LLGVIFFKPLY_					0	0	0			REV__ENSG00000146433|ENST00000684151|TMEM181	REV__ENSG00000146433|ENST00000684151|TMEM181	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2674865722656	3	437.268804	1308.78458	-1.6775	-0.00073351	-0.55762	-0.00024383	-2.2351	-0.00097734	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.78391	1	4555	4555		14.694	0.60766	1	2305800	+		30578	20017	20265	20275	34918	34918					0.1425405806157869
LLGVIFFKPLY	11	Unmodified	_LLGVIFFKPLY_					0	0	0			REV__ENSG00000146433|ENST00000684151|TMEM181	REV__ENSG00000146433|ENST00000684151|TMEM181	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26800537109375	3	437.268804	1308.78458	-0.68964	-0.00030156	-1.6167	-0.00070692	-2.3063	-0.0010085	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.78391	1	4832	4832		14.694	0.55655	1	2651700	+		30579	20017	20265	20275	34919	34919					0.1425405806157869
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.77984619140625	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.76996	1	2785	2785		33.516	3.0119	1	2581600	+		30580	17036	20266	20276	34920	34920					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7792053222656	2	434.778754	867.542954	-1.8344	-0.00079754	4.3253	0.0018805	2.4909	0.001083	434.7805085345101	43.07	1.706	43.07	42.535	44.241	0					126	41	4	0	0	0	0.39977	2	3138	3013;3138		57.811	15.337	1	2514600	+		30581	17036	20266	20276	34921;34922	34922					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7802429199219	2	434.778754	867.542954	-0.14252	-6.1964E-05	3.501	0.0015222	3.3585	0.0014602	434.78017454908985	35.066	1.262	35.054	34.849	36.111	-0.012203					110	29	4	0	0	0	0.76996	1	2129	2129		33.516	0	1	2804500	+		30582	17036	20266	20276	34923	34923					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.780029296875	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.67235	2	2349	2349;2469		42.474	7.2737	1	3714500	+		30583	17036	20266	20276	34924;34925	34924					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77996826171875	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.69914	2	3042	3042;3186		40.573	7.057	1	2938700	+		30584	17036	20266	20276	34926;34927	34926					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7796630859375	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.76996	1	3581	3581		33.516	1.5607	1	1294000	+		30585	17036	20266	20276	34928	34928					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.779541015625	2	434.778754	867.542954	-1.2494	-0.00054321	3.5325	0.0015359	2.2831	0.00099266	434.7801616022163	41.477	1.7868	41.436	40.922	42.709	-0.04081					147	45	4	0	0	0	0.67235	3	3224	3188;3224;3283		42.474	7.2737	1	2800900	+		30586	17036	20266	20276	34929;34930;34931	34930					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77972412109375	2	434.778754	867.542954	-1.1228	-0.00048815	3.4102	0.0014827	2.2874	0.00099453	434.7801032015678	43.351	2.0206	43.315	42.595	44.616	-0.035816					155	47	4	0	0	0	0.69914	1	3343	3343		40.573	5.3719	1	2016300	+		30587	17036	20266	20276	34932	34932					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7799072265625	2	434.778754	867.542954	-1.003	-0.00043608	3.6101	0.0015696	2.6071	0.0011335	434.7801973515074	45.237	1.8216	45.206	44.189	46.01	-0.031067					113	41	4	0	0	0	0.69914	2	3682	3682;3718		40.573	7.057	1	1431800	+		30588	17036	20266	20276	34933;34934	34933					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7798156738281	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.67235	1	3884	3884		42.474	8.9589	1	2468400	+		30589	17036	20266	20276	34935	34935					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77972412109375	2	434.778754	867.542954	-0.81007	-0.0003522	3.4341	0.0014931	2.624	0.0011409	434.7801064754335	48.077	2.7534	48.052	47.541	50.295	-0.025112					179	68	4	0	0	0	0.69914	2	4146	4062;4146		40.573	1.7665	1	1940000	+		30590	17036	20266	20276	34936;34937	34937					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801208496094	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.67235	1	2186	2186		42.474	1.9018	1	3951300	+		30591	17036	20266	20276	34938	34938					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801513671875	2	434.778754	867.542954	-0.14051	-6.1091E-05	3.4383	0.0014949	3.2978	0.0014338	434.7801225093181	38.257	1.3722	38.268	37.812	39.184	0.011173					116	31	4	0	0	0	0.76996	2	2622	2622;2646		33.516	0	1	2138600	+		30592	17036	20266	20276	34939;34940	34939					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77984619140625	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.76996	1	3109	3109		33.516	3.674	1	2766200	+		30593	17036	20266	20276	34941	34941					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7796936035156	2	434.778754	867.542954	1.0906	0.00047416	1.4824	0.00064451	2.573	0.0011187	434.77927379886756	45.133	1.9101	45.129	44.288	46.198	-0.0041618					129	44	4	0	0	0	0.67235	1	3643	3643		42.474	8.9589	1	1333000	+		30594	17036	20266	20276	34942	34942					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7796630859375	2	434.778754	867.542954	1.3776	0.00059897	1.1215	0.0004876	2.4991	0.0010866	434.7791184687597	46.776	1.6866	46.772	46.112	47.798	-0.0041618					148	47	4	0	0	0	0.77546	1	3749	3749		31.955	3.7006	1	2109000	+		30595	17036	20266	20276	34943	34943					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77984619140625	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.76996	2	4065	4065;4102		33.516	1.5607	1	1803700	+		30596	17036	20266	20276	34944;34945	34944					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7799987792969	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.7932	1	2872	2872		25.45	0	1	2524800	+		30597	17036	20266	20276	34946	34946					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7796630859375	2	434.778754	867.542954	-1.6369	-0.00071169	4.2666	0.001855	2.6297	0.0011433	434.7804825082367	43.238	1.5673	43.244	42.525	44.093	0.0057526					133	41	4	0	0	0	0.76996	2	2990	2990;3037		33.516	0	1	2391100	+		30598	17036	20266	20276	34947;34948	34947					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77996826171875	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.67235	3	3128	3128;3140;3300		42.474	7.2737	1	1177900	+		30599	17036	20266	20276	34949;34950;34951	34949					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77996826171875	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.76996	1	3472	3472		33.516	6.7195	1	2364100	+		30600	17036	20266	20276	34952	34952					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7799377441406	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.76996	1	3696	3696		33.516	5.2613	1	1959200	+		30601	17036	20266	20276	34953	34953					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801208496094	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.76996	2	2002	2002;2077		33.516	1.5607	1	4737100	+		30602	17036	20266	20276	34954;34955	34954					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77947998046875	2	434.778754	867.542954	0.18498	8.0427E-05	2.9584	0.0012863	3.1434	0.0013667	434.7799222967292	39.501	1.6389	39.589	38.953	40.592	0.088375					151	45	4	0	0	0	0.7932	1	2512	2512		25.45	0	1	4736600	+		30603	17036	20266	20276	34956	34956					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7798767089844	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.76996	1	2745	2745		33.516	1.5607	1	2513700	+		30604	17036	20266	20276	34957	34957					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7791442871094	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.7932	1	3358	3358		25.45	2.4135	1	2750200	+		30605	17036	20266	20276	34958	34958					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7798156738281	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.76996	1	3699	3699		33.516	0	1	1986600	+		30606	17036	20266	20276	34959	34959					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799987792969	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.7932	1	1771	1771		25.45	0	1	2158200	+		30607	17036	20266	20276	34960	34960					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801513671875	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.76996	1	2027	2027		33.516	0	1	4750000	+		30608	17036	20266	20276	34961	34961					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7797546386719	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.67235	3	2808	2662;2705;2808		42.474	8.9589	1	2793300	+		30609	17036	20266	20276	34962;34963;34964	34964					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7802734375	2	434.778754	867.542954	-0.29603	-0.00012871	3.1388	0.0013647	2.8428	0.001236	434.77998100939635	44.91	1.6932	44.842	44.077	45.77	-0.068634					139	41	4	0	0	0	0.67235	4	3154	3154;3189;3302;3312		42.474	7.2737	1	1190800	+		30610	17036	20266	20276	34965;34966;34967;34968	34965					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7787170410156	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.7932	2	3334	3334;3506		25.45	4.8428	1	2833200	+		30611	17036	20266	20276	34969;34970	34969					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7798156738281	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.76996	1	3691	3691		33.516	3.674	1	2175000	+		30612	17036	20266	20276	34971	34971					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78009033203125	2	434.778754	867.542954	-0.89312	-0.00038831	3.6526	0.0015881	2.7595	0.0011998	434.7802679041939	61.693	0.95562	61.709	61.315	62.27	0.015724					65	41	2	0	0	0	0.7932	1	5383	5383		25.45	0	1	303610	+		30613	17036	20266	20276	34972	34972					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7782897949219	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.7932	1	2603	2603		25.45	3.7478	1	8013100	+		30614	17036	20266	20276	34973	34973					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7805480957031	2	434.778754	867.542954	0.35961	0.00015635	3.3799	0.0014695	3.7395	0.0016259	434.78011136196255	36.165	2.4395	36.447	35.432	37.871	0.28173					211	60	5	0	0	0	0.76996	6	2781	2781;2792;2913;2926;2938;2967		33.516	3.674	1	8602100	+		30615	17036	20266	20276	34974;34975;34976;34977;34978;34979	34974					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7799072265625	2	434.778754	867.542954	-0.7455	-0.00032413	3.1434	0.0013667	2.3979	0.0010426	434.7799642778913	44.364	1.5041	44.814	44.322	45.826	0.45025					111	36	4	0	0	0	0.7932	1	4131	4131		25.45	0	1	4473900	+		30616	17036	20266	20276	34980	34980					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7805480957031	2	434.778754	867.542954	1.7459	0.00075909	2.0876	0.00090764	3.8335	0.0016667	434.7795583562852	36.032	2.5113	36.473	35.233	37.744	0.44043					149	62	4	0	0	0	0.76996	1	2780	2780		33.516	0	1	9979000	+		30617	17036	20266	20276	34981	34981					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77923583984375	2	434.778754	867.542954	-1.4872	-0.00064659	2.9694	0.001291	1.4823	0.00064445	434.7799081673859	43.398	0.96524	44.172	43.498	44.463	0.7738					64	23	3	0	0	0	0.7932	1	3851	3851		25.45	0	1	2227600	+		30618	17036	20266	20276	34982	34982					0.10388447425293634
LLGVIVAPS	9	Unmodified	_LLGVIVAPS_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77789306640625	2	434.778754	867.542954	-0.91901	-0.00039957	3.2028	0.0013925	2.2837	0.00099292	434.7800246732522	44.2	1.4198	45.044	44.534	45.954	0.84437					118	34	4	0	0	0	0.76996	1	4022	4022		33.516	0	1	4932000	+		30619	17036	20266	20276	34983	34983					0.10388447425293634
LLGVKAVL	8	Unmodified	_LLGVKAVL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7853698730469	2	406.783839	811.553125	-0.12701	-5.1665E-05	4.0102	0.0016313	3.8832	0.0015796	406.7853480704683	34.439	1.4356	34.434	33.818	35.254	-0.0047417					125	35	4	0	0	0	0.86791	2	2062	2041;2062		35.201	6.9464	1	1552500			30620	4108	20267	20277	34984;34985	34985					0.13981055150509292
LLGVKAVL	8	Unmodified	_LLGVKAVL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7848205566406	2	406.783839	811.553125	-0.12228	-4.9742E-05	4.0703	0.0016557	3.948	0.001606	406.7853695051589	35.638	4.6571	35.626	35.208	39.865	-0.012199					169	106	4	0	0	0	0.88915	1	2201	2201		35.201	0	1	683900			30621	4108	20267	20277	34986	34986					0.13981055150509292
LLGVKAVL	8	Unmodified	_LLGVKAVL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78509521484375	2	406.783839	811.553125	1.6742	0.00068103	2.1022	0.00085513	3.7764	0.0015362	406.78458476785784	34.278	1.4525	34.281	33.794	35.247	0.0026054					117	34	4	0	0	0	0.80706	6	2157	2060;2073;2085;2109;2132;2157		42.474	6.9464	1	2275400			30622	4108	20267	20277	34987;34988;34989;34990;34991;34992	34992					0.13981055150509292
LLGVKAVL	8	Unmodified	_LLGVKAVL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852783203125	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.86288	1	1505	1505		26.796	0	1	1817700			30623	4108	20267	20277	34993	34993					0.13981055150509292
LLGVKAVL	8	Unmodified	_LLGVKAVL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852478027344	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.80706	3	1744	1685;1744;1760		21.702	7.0382	1	1879900			30624	4108	20267	20277	34994;34995;34996	34995					0.13981055150509292
LLGVKAVL	8	Unmodified	_LLGVKAVL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7851257324219	2	406.783839	811.553125	0.56827	0.00023116	3.0171	0.0012273	3.5854	0.0014585	406.78493901596437	31.598	1.6437	31.678	30.856	32.5	0.079834					110	37	4	0	0	0	0.80706	3	2233	2173;2209;2233		26.796	0	1	5409400			30625	4108	20267	20277	34997;34998;34999	34999					0.13981055150509292
LLGVKAVL	8	Unmodified	_LLGVKAVL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7851257324219	2	406.783839	811.553125	0.94675	0.00038512	2.7522	0.0011195	3.699	0.0015047	406.78484451151587	33.529	1.369	33.798	33.413	34.781	0.26929					111	32	4	0	0	0	0.81548	5	2450	2414;2437;2450;2462;2488		37.028	0	1	7385300			30626	4108	20267	20277	35000;35001;35002;35003;35004	35002					0.13981055150509292
LLGVKAVL	8	Unmodified	_LLGVKAVL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.783839	811.553125	-1.9624	-0.00079826	5.8732	0.0023891	3.9108	0.0015909	406.78606904785835	34.391	1.3853	34.391	33.871	35.256	0	0.064871	0.0014625	NaN	42.474	127	38	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2088000			30627	4108	20267	20277							0.13981055150509292
LLGVKAVL	8	Unmodified	_LLGVKAVL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.783839	811.553125	-0.62443	-0.00025401	4.4987	0.00183	3.8742	0.001576	406.7855417548869	34.435	1.4273	34.378	33.912	35.339	-0.056385	0.052703	0.0003442	NaN	42.474	118	32	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2128000			30628	4108	20267	20277							0.13981055150509292
LLGVKAVL	8	Unmodified	_LLGVKAVL_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.783839	811.553125	-1.9133	-0.00077832	5.703	0.0023199	3.7897	0.0015416	406.78602541890416	34.289	1.3846	34.328	33.855	35.239	0.038639	0.0017545	0.001324	NaN	42.474	173	58	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1887900			30629	4108	20267	20277							0.13981055150509292
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3011169433594	2	456.299853	910.585153	-1.7707	-0.00080797	4.1491	0.0018932	2.3784	0.0010852	456.3016315256623	46.489	1.398	46.489	46.06	47.458	0					92	40	3	0	0	0	0.85976	1	3463	3463		35.201	1.6851	1	435240			30630	4539	20268	20278	35005	35005					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30096435546875	2	456.299853	910.585153	-1.7466	-0.00079699	4.271	0.0019489	2.5244	0.0011519	456.30164650413656	48.155	1.4761	48.155	47.668	49.144	0					86	41	3	0	0	0	0.86786	1	3799	3799		26.796	0	1	227150			30631	4539	20268	20278	35006	35006					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3006896972656	2	456.299853	910.585153	-1.704	-0.00077753	4.2277	0.0019291	2.5237	0.0011516	456.30169392329583	51.067	1.2916	51.067	50.539	51.831	0					52	33	2	0	0	0	0.85976	1	4119	4119		35.201	7.3185	1	76610			30632	4539	20268	20278	35007	35007					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7900695800781	2	456.299853	910.585153	-1.8344	-0.00083703	3.6422	0.0016619	1.8078	0.00082489	456.3014157104389	42.362	0.87118	42.362	41.808	42.679	0					48	21	3	0	0	0	0.37624	1	2877	2877		44.531	9.3304	1	225250			30633	4539	20268	20278	35008	35008					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3011779785156	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.85108	1	1929	1929		19.36	0	1	1057300			30634	4539	20268	20278	35009	35009					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.301513671875	2	456.299853	910.585153	-0.11111	-5.0701E-05	2.9884	0.0013636	2.8773	0.0013129	456.3010566410468	35.268	1.48	35.256	34.768	36.248	-0.012203					106	34	4	0	0	0	0.85976	1	2225	2225		35.201	1.6851	1	794600			30635	4539	20268	20278	35010	35010					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.29925537109375	2	456.299853	910.585153	0.060695	2.7695E-05	2.8141	0.0012841	2.8748	0.0013118	456.3009104320022	48.176	2.3719	48.166	47.652	50.024	-0.0093269					99	60	3	0	0	0	0.70264	2	3930	3908;3930		44.531	8.4046	1	293790			30636	4539	20268	20278	35011;35012	35012					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3017578125	2	456.299853	910.585153	-0.68927	-0.00031451	3.5345	0.0016128	2.8453	0.0012983	456.30128778001557	35.219	1.6098	35.163	34.768	36.378	-0.056385					101	36	5	0	0	0	0.86786	1	2346	2346		26.796	0	1	710350			30637	4539	20268	20278	35013	35013					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3013916015625	2	456.299853	910.585153	-0.84354	-0.00038491	3.2342	0.0014758	2.3906	0.0010908	456.30117331551685	46.601	1.8723	46.572	45.714	47.586	-0.028778					105	48	3	0	0	0	0.86786	1	3816	3816		26.796	0	1	332630			30638	4539	20268	20278	35014	35014					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.301025390625	2	456.299853	910.585153	-0.23513	-0.00010729	2.1872	0.000998	1.952	0.00089071	456.3007121817001	45.145	1.6994	45.141	44.498	46.198	-0.0041618					86	39	3	0	0	0	0.85976	1	3616	3616		35.201	10.998	1	438290			30639	4539	20268	20278	35015	35015					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3006896972656	2	456.299853	910.585153	0.067738	3.0909E-05	2.1767	0.00099321	2.2444	0.0010241	456.3007392849424	46.706	1.5961	46.702	46.112	47.708	-0.0041618					92	43	3	0	0	0	0.86786	2	3797	3797;3808		26.796	2.5934	1	327340			30640	4539	20268	20278	35016;35017	35016					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30133056640625	2	456.299853	910.585153	-1.2643	-0.00057689	4.2328	0.0019314	2.9685	0.0013545	456.30161744594176	35.005	1.68	35.044	34.605	36.285	0.038643					125	54	3	0	0	0	0.86786	1	1793	1793		26.796	0	1	565550			30641	4539	20268	20278	35018	35018					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3003845214844	2	456.299853	910.585153	-1.2534	-0.00057195	2.4458	0.001116	1.1923	0.00054406	456.30078981863505	41.119	1.382	41.123	40.607	41.989	0.0043983					85	44	3	0	0	0	0.86786	1	2669	2669		26.796	7.4361	1	328800			30642	4539	20268	20278	35019	35019					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30133056640625	2	456.299853	910.585153	-1.2433	-0.00056734	3.7269	0.0017006	2.4835	0.0011332	456.3014230602223	46.4	1.7062	46.416	45.86	47.566	0.015514					104	48	3	0	0	0	0.85976	2	3397	3397;3462		35.201	10.697	1	349560			30643	4539	20268	20278	35020;35021	35020					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3011169433594	2	456.299853	910.585153	-1.2401	-0.00056585	4.009	0.0018293	2.7689	0.0012635	456.30156916683757	47.995	1.2721	48.018	47.652	48.924	0.02227					72	35	3	0	0	0	0.86786	1	3673	3673		26.796	0	1	212280			30644	4539	20268	20278	35022	35022					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7917785644531	2	456.299853	910.585153	-1.2554	-0.00057285	3.8227	0.0017443	2.5673	0.0011715	456.30134105223925	39.578	1.7678	39.585	38.842	40.609	0.0065002					91	49	3	0	0	0	0.37624	1	2490	2490		44.531	25.171	1	547140			30645	4539	20268	20278	35023	35023					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3018798828125	2	456.299853	910.585153	-0.23118	-0.00010549	2.4791	0.0011312	2.2479	0.0010257	456.30086790597977	45.013	2.0189	44.944	43.946	45.965	-0.068634					97	50	2	0	0	0	0.86786	1	3278	3278		26.796	0	1	498520			30646	4539	20268	20278	35024	35024					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3009338378906	2	456.299853	910.585153	-0.28505	-0.00013007	2.6178	0.0011945	2.3328	0.0010645	456.3009409160632	46.468	1.3803	46.389	45.933	47.313	-0.079002					82	40	3	0	0	0	0.86786	1	3408	3408		26.796	5.8492	1	401880			30647	4539	20268	20278	35025	35025					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3014221191406	2	456.299853	910.585153	-0.34519	-0.00015751	3.1038	0.0014163	2.7586	0.0012588	456.30112978669194	48.146	1.4143	48.053	47.615	49.029	-0.093178					75	35	3	0	0	0	0.85976	1	3709	3709		35.201	8.4046	1	317120			30648	4539	20268	20278	35026	35026					0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	456.299853	910.585153	0.30924	0.0001411	2.4581	0.0011216	2.7673	0.0012627	456.3008744915828	50.901	1.0208	50.951	50.343	51.363	0.0499	-0.22555	-0.00047705	NaN	35.201	46	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150430			30649	4539	20268	20278							0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	456.299853	910.585153	-0.43937	-0.00020048	3.4284	0.0015644	2.989	0.0013639	456.30120298830036	51.086	1.2802	51.002	50.191	51.471	-0.084534	-0.17494	0.00040845	NaN	35.201	68	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96413			30650	4539	20268	20278							0.1262842283366581
LLGVLAVGLG	10	Unmodified	_LLGVLAVGLG_					0	0	0		ENST00000539627.5_1_19:41889529-41889775:+|nuORF;ENSG00000142046|ENST00000392002|TMEM91	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	ENST00000539627.5_1_19:41889529-41889775:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	456.299853	910.585153	-0.48119	-0.00021957	1.925	0.00087837	1.4438	0.0006588	456.300610125844	51.006	0.49778	51.441	51.202	51.7	0.43505	0.26455	-0.00096358	NaN	35.201	13	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67513			30651	4539	20268	20278							0.1262842283366581
LLGVLGSLP	9	Unmodified	_LLGVLGSLP_					0	0	0		ENST00000211379.9_1_6:31619532-31620470:-|nuORF;ENST00000375964.10_1_6:31619532-31620470:-|nuORF	ENST00000211379.9_1_6:31619532-31620470:-|nuORF	ENST00000211379.9_1_6:31619532-31620470:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7794189453125	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.7932	1	3982	3982		26.796	1.3459	1	2468400			30652	9111	20269	20279	35027	35027					0.10388447425293634
LLGVLGSLP	9	Unmodified	_LLGVLGSLP_					0	0	0		ENST00000211379.9_1_6:31619532-31620470:-|nuORF;ENST00000375964.10_1_6:31619532-31620470:-|nuORF	ENST00000211379.9_1_6:31619532-31620470:-|nuORF	ENST00000211379.9_1_6:31619532-31620470:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77947998046875	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.7932	1	3288	3288		26.796	1.3459	1	1327200			30653	9111	20269	20279	35028	35028					0.10388447425293634
LLGVLGSLP	9	Unmodified	_LLGVLGSLP_					0	0	0		ENST00000211379.9_1_6:31619532-31620470:-|nuORF;ENST00000375964.10_1_6:31619532-31620470:-|nuORF	ENST00000211379.9_1_6:31619532-31620470:-|nuORF	ENST00000211379.9_1_6:31619532-31620470:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7792053222656	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.7932	1	3351	3351		19.36	1.0356	1	2833200			30654	9111	20269	20279	35029	35029					0.10388447425293634
LLGVLTEIA	9	Unmodified	_LLGVLTEIA_					0	0	0			REV__ENSG00000169126|ENST00000305242|ODAD2	REV__ENSG00000169126|ENST00000305242|ODAD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.2924499511719	2	464.789318	927.564084	0.89139	0.00041431	1.9223	0.00089347	2.8137	0.0013078	464.79003742399567	33.921	1.5866	34.225	33.702	35.289	0.30494					91	38	3	0	0	0	0.7932	1	2529	2529		25.45	2.4077	1	1052300	+		30655	21552	20270	20280	35030	35030					0.09740412734129222
LLGVLVVSPD	10	Unmodified	_LLGVLVVSPD_					0	0	0		ENSG00000197471|ENST00000652691|SPN	ENSG00000197471|ENST00000652691|SPN	ENSG00000197471|ENST00000652691|SPN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3089904785156	2	506.307875	1010.6012	-0.49937	-0.00025284	2.5452	0.0012887	2.0458	0.0010358	506.30921071470516	49.299	2.411	49.324	47.87	50.281	0.025578					89	62	2	0	0	0	0.84112	1	3808	3808		37.159	10.363	1	190740			30656	8168	20271	20281	35031	35031					0.09632084279917308
LLGVPANK	8	Unmodified	_LLGVPANK_					0	0	0		ENST00000471117.5_1_1:155278696-155288124:+|nuORF	ENST00000471117.5_1_1:155278696-155288124:+|nuORF	ENST00000471117.5_1_1:155278696-155288124:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.25726318359375	2	406.255446	810.496338	0.018638	7.5718E-06	3.5962	0.001461	3.6148	0.0014685	406.2568104671837	38.391	1.0373	38.363	37.994	39.031	-0.027843					57	23	3	0	0	0	0.83466	1	2648	2648		23.037	0	1	345700			30657	12235	20272	20282	35032	35032					0.08351007593989834
LLGVPANK	8	Unmodified	_LLGVPANK_					0	0	0		ENST00000471117.5_1_1:155278696-155288124:+|nuORF	ENST00000471117.5_1_1:155278696-155288124:+|nuORF	ENST00000471117.5_1_1:155278696-155288124:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5641174316406	2	406.255446	810.496338	1.5179	0.00061664	2.6476	0.0010756	4.1655	0.0016923	406.25644581486745	58.63	2.4476	58.664	57.505	59.952	0.033909					98	70	2	0	0	0	0.4196	1	5510	5510		20.482	8.9708	1	114000			30658	12235	20272	20282	35033	35033					0.08351007593989834
LLGVPGHKKAM	11	Unmodified	_LLGVPGHKKAM_					0	0	0			REV__ENSG00000116771|ENST00000375826|AGMAT	REV__ENSG00000116771|ENST00000375826|AGMAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8428344726562	2	575.841894	1149.66923	1.6833	0.00096931	0.25656	0.00014774	1.9399	0.0011171	575.8419126202111	90.702	2.7581	90.632	88.716	91.474	-0.069977					216	65	4	0	0	0	0.75495	1	9398	9398		20.947	0	1	1939000	+		30659	18223	20273	20283	35034	35034					0.10038630658914371
LLGVPKTT	8	Unmodified	_LLGVPKTT_					0	0	0			REV__nc|ENSG00000107949|Q9P287-2|BCCIP	REV__nc|ENSG00000107949|Q9P287-2|BCCIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.76220703125	2	414.763104	827.511654	-1.0998	-0.00045617	-2.0044	-0.00083134	-3.1042	-0.0012875	414.762210032181	88.155	2.0302	88.618	88.102	90.132	0.46312					152	49	4	0	0	0	0.88915	1	10519	10519		35.201	1.6851	1	10243000	+		30660	29768	20274	20284	35035	35035					0.09099874391188223
LLGVPLVGA	9	Unmodified	_LLGVPLVGA_					0	0	0		ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.774658203125	2	419.773471	837.53239	0.29636	0.0001244	3.1717	0.0013314	3.4681	0.0014558	419.77476468640464	52.151	1.1529	52.21	51.751	52.904	0.059719					66	36	3	0	0	0	0.55559	1	4195	4195		49.211	6.7363	1	170490			30661	6654	20275	20285	35036	35036					0.10712464770858787
LLGVPLVGA	9	Unmodified	_LLGVPLVGA_					0	0	0		ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	419.773471	837.53239	-1.7004	-0.00071379	5.6149	0.002357	3.9144	0.0016432	419.7757011488393	52.424	1.7975	52.424	51.586	53.384	0	0.20079	0.0010651	NaN	49.211	73	47	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	207310			30662	6654	20275	20285							0.10712464770858787
LLGVPLVGA	9	Unmodified	_LLGVPLVGA_					0	0	0		ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	419.773471	837.53239	-1.8465	-0.0007751	5.5262	0.0023198	3.6797	0.0015447	419.7757384989657	52.163	1.2225	52.204	51.517	52.74	0.040596	-0.019747	0.00099065	NaN	49.211	59	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	202250			30663	6654	20275	20285							0.10712464770858787
LLGVPLVGA	9	Unmodified	_LLGVPLVGA_					0	0	0		ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	419.773471	837.53239	-0.61524	-0.00025826	4.1706	0.0017507	3.5554	0.0014924	419.77510623203386	52.301	1.7898	52.227	50.978	52.768	-0.074509	0.003362	-0.00014746	NaN	49.211	74	52	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183680			30664	6654	20275	20285							0.10712464770858787
LLGVPVLN	8	Unmodified	_LLGVPVLN_					0	0	0		ENSG00000063587|ENST00000650114|ZNF275	ENSG00000063587|ENST00000650114|ZNF275	ENSG00000063587|ENST00000650114|ZNF275	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2668762207031	2	412.765646	823.516739	-1.3459	-0.00055553	3.4065	0.0014061	2.0606	0.00085056	412.76701040612045	40.372	1.7448	40.328	39.579	41.324	-0.043694					94	45	3	0	0	0	0.86288	1	2901	2901		26.796	2.5934	1	625910			30665	1092	20276	20286	35037	35037					0.0979217825380374
LLGVPVLN	8	Unmodified	_LLGVPVLN_					0	0	0		ENSG00000063587|ENST00000650114|ZNF275	ENSG00000063587|ENST00000650114|ZNF275	ENSG00000063587|ENST00000650114|ZNF275	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7667541503906	2	412.765646	823.516739	-1.9024	-0.00078523	4.0039	0.0016527	2.1015	0.00086745	412.7675544540149	40.173	1.81	40.179	39.296	41.106	0.0065002					141	57	4	0	0	0	0.86791	1	2545	2545		28.254	6.5519	1	726100			30666	1092	20276	20286	35038	35038					0.0979217825380374
LLGVQVLP	8	Unmodified	_LLGVQVLP_					0	0	0		ENSG00000133059|ENST00000367162|DSTYK;nc|ENSG00000133059|Q6XUX3-2|DSTYK;nc|ENSG00000133059|Q6XUX3-3|DSTYK	ENSG00000133059|ENST00000367162|DSTYK	ENSG00000133059|ENST00000367162|DSTYK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77508544921875	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.86791	2	3391	3391;3402		37.028	6.5519	1	11423000			30667	3852	20277	20287	35039;35040	35039					0.10712464770847419
LLGVQVLP	8	Unmodified	_LLGVQVLP_					0	0	0		ENSG00000133059|ENST00000367162|DSTYK;nc|ENSG00000133059|Q6XUX3-2|DSTYK;nc|ENSG00000133059|Q6XUX3-3|DSTYK	ENSG00000133059|ENST00000367162|DSTYK	ENSG00000133059|ENST00000367162|DSTYK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7748718261719	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.86791	1	3407	3407		28.254	1.4582	1	10266000			30668	3852	20277	20287	35041	35041					0.10712464770847419
LLGVQVLP	8	Unmodified	_LLGVQVLP_					0	0	0		ENSG00000133059|ENST00000367162|DSTYK;nc|ENSG00000133059|Q6XUX3-2|DSTYK;nc|ENSG00000133059|Q6XUX3-3|DSTYK	ENSG00000133059|ENST00000367162|DSTYK	ENSG00000133059|ENST00000367162|DSTYK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.77557373046875	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.88915	1	2964	2964		35.201	3.2459	1	10440000			30669	3852	20277	20287	35042	35042					0.10712464770847419
LLGVRQLNLLG	11	Unmodified	_LLGVRQLNLLG_					0	0	0			REV__nc|ENSG00000008323|Q3KR16-2|PLEKHG6	REV__nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3817138671875	2	598.379697	1194.74484	-1.3328	-0.00079753	3.7818	0.002263	2.449	0.0014655	598.3818526094551	40.308	0.87541	40.701	40.092	40.968	0.39209					91	22	5	0	0	0	0.53495	2	3453	3440;3453		49.442	7.0454	1	10750000	+		30670	16136	20278	20288	35043;35044	35044					0.15525931110823876
LLGVRQLNLLG	11	Unmodified	_LLGVRQLNLLG_					0	0	0			REV__nc|ENSG00000008323|Q3KR16-2|PLEKHG6	REV__nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3790893554688	2	598.379697	1194.74484	-1.5819	-0.00094655	3.9051	0.0023368	2.3233	0.0013902	598.381910376305	40.152	1.105	40.741	40.044	41.149	0.58915					94	27	5	0	0	0	0.61774	2	3440	3428;3440		42.396	6.7778	1	9102300	+		30671	16136	20278	20288	35045;35046	35046					0.15525931110823876
LLGVRTLYRF	10	Unmodified	_LLGVRTLYRF_					0	0	0		nc|ENSG00000038427|P13611-5|VCAN;ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-2|VCAN;nc|ENSG00000038427|P13611-3|VCAN;nc|ENSG00000038427|P13611-4|VCAN	nc|ENSG00000038427|P13611-5|VCAN	nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.3718872070312	2	619.374415	1236.73428	-0.10661	-6.6034E-05	-3.8471	-0.0023828	-3.9537	-0.0024488	619.3719649656875	101.89	1.4654	101.89	101.45	102.91	0					98	36	4	0	0	0	0.86718	1	10415	10415		27.882	1.1893	1	1989800			30672	917	20279	20289	35047	35047					0.1253794845642915
LLGVVALLPL	10	Unmodified	_LLGVVALLPL_					0	0	0		ENST00000262570.9_2_7:132766727-132766832:-|nuORF	ENST00000262570.9_2_7:132766727-132766832:-|nuORF	ENST00000262570.9_2_7:132766727-132766832:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34820556640625	2	504.346803	1006.67905	0.33922	0.00017108	2.4867	0.0012542	2.8259	0.0014252	504.34787681468055	34.758	1.3281	34.968	34.604	35.932	0.21002					94	33	4	0	0	0	0.85108	1	2595	2595		19.36	0	1	1680800			30673	9445	20280	20290	35048	35048					0.175981419359573
LLGVVALLPL	10	Unmodified	_LLGVVALLPL_					0	0	0		ENST00000262570.9_2_7:132766727-132766832:-|nuORF	ENST00000262570.9_2_7:132766727-132766832:-|nuORF	ENST00000262570.9_2_7:132766727-132766832:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3480224609375	2	504.346803	1006.67905	0.25279	0.00012749	2.2254	0.0011224	2.4782	0.0012499	504.3477701271758	36.647	1.9451	36.928	36.004	37.949	0.28173					113	47	4	0	0	0	0.87636	1	2903	2903		12.959	0	1	1998100			30674	9445	20280	20290	35049	35049					0.175981419359573
LLGVVALLPL	10	Unmodified	_LLGVVALLPL_					0	0	0		ENST00000262570.9_2_7:132766727-132766832:-|nuORF	ENST00000262570.9_2_7:132766727-132766832:-|nuORF	ENST00000262570.9_2_7:132766727-132766832:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3477478027344	2	504.346803	1006.67905	1.8375	0.00092675	1.0233	0.00051612	2.8609	0.0014429	504.347172191427	34.679	1.3601	35.06	34.73	36.09	0.3812					85	34	4	0	0	0	0.85108	1	2621	2621		19.36	0	1	1730500			30675	9445	20280	20290	35050	35050					0.175981419359573
LLGVVIPTG	9	Unmodified	_LLGVVIPTG_					0	0	0			REV__ENSG00000144040|ENST00000272433|SFXN5	REV__ENSG00000144040|ENST00000272433|SFXN5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7794494628906	2	434.778754	867.542954	0.20501	8.9135E-05	2.1081	0.00091654	2.3131	0.0010057	434.77952396468385	43.343	2.099	43.316	42.291	44.39	-0.026768					151	50	4	0	0	0	0.76402	1	3391	3391		35.201	1.6851	1	2133200	+		30676	19868	20281	20291	35051	35051					0.10388447425282266
LLGVVIPTG	9	Unmodified	_LLGVVIPTG_					0	0	0			REV__ENSG00000144040|ENST00000272433|SFXN5	REV__ENSG00000144040|ENST00000272433|SFXN5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7795715332031	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.76996	1	2710	2710		33.516	6.7195	1	2513700	+		30677	19868	20281	20291	35052	35052					0.10388447425282266
LLGVVIPTG	9	Unmodified	_LLGVVIPTG_					0	0	0			REV__ENSG00000144040|ENST00000272433|SFXN5	REV__ENSG00000144040|ENST00000272433|SFXN5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77978515625	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.64338	1	3467	3467		44.531	2.0566	1	2833200	+		30678	19868	20281	20291	35053	35053					0.10388447425282266
LLGVVLTTG	9	Unmodified	_LLGVVLTTG_					0	0	0			REV__nc|ENSG00000104381|Q8TB36-2|GDAP1	REV__nc|ENSG00000104381|Q8TB36-2|GDAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77496337890625	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.7932	3	9211	9187;9211;9235		26.796	2.5934	1	13819000	+		30679	17455	20282	20292	35054;35055;35056	35055					0.0969614356265538
LLGVVQVAL	9	Unmodified	_LLGVVQVAL_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30108642578125	2	456.299853	910.585153	-1.7927	-0.00081802	3.97	0.0018115	2.1773	0.00099349	456.30151188064457	45.052	1.9056	45.052	44.154	46.06	0					117	46	3	0	0	0	0.76402	1	3280	3280		35.201	1.6851	1	498210	+		30680	21897	20283	20293	35057	35057					0.1262842283365444
LLGVVQVAL	9	Unmodified	_LLGVVQVAL_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3010559082031	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.7932	1	2093	2093		25.45	0	1	1715600	+		30681	21897	20283	20293	35058	35058					0.1262842283365444
LLGVVQVAL	9	Unmodified	_LLGVVQVAL_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3006896972656	2	456.299853	910.585153	-0.84354	-0.00038491	3.2342	0.0014758	2.3906	0.0010908	456.30117331551685	46.601	1.8723	46.572	45.714	47.586	-0.028778					105	48	3	0	0	0	0.77546	1	3829	3829		31.955	5.1588	1	332630	+		30682	21897	20283	20293	35059	35059					0.1262842283365444
LLGVVQVAL	9	Unmodified	_LLGVVQVAL_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.301513671875	2	456.299853	910.585153	-1.2433	-0.00056734	3.7269	0.0017006	2.4835	0.0011332	456.3014230602223	46.4	1.7062	46.416	45.86	47.566	0.015514					104	48	3	0	0	0	0.77546	1	3440	3440		31.955	2.8053	1	349560	+		30683	21897	20283	20293	35060	35060					0.1262842283365444
LLGVVQVAL	9	Unmodified	_LLGVVQVAL_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3011169433594	2	456.299853	910.585153	0.16746	7.6412E-05	2.7809	0.0012689	2.9484	0.0013454	456.30098393638264	34.91	1.4474	35.016	34.575	36.022	0.10603					127	53	3	0	0	0	0.72402	1	1799	1799		38.806	3.6054	1	751300	+		30684	21897	20283	20293	35061	35061					0.1262842283365444
LLGVVQVAL	9	Unmodified	_LLGVVQVAL_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3011779785156	2	456.299853	910.585153	-0.16313	-7.4434E-05	2.0671	0.00094322	1.904	0.00086878	456.30063437425633	43.131	1.7393	43.081	42.268	44.008	-0.050308					99	45	4	0	0	0	0.5393	1	2949	2949		50.025	7.5501	1	855890	+		30685	21897	20283	20293	35062	35062					0.1262842283365444
LLGVVQVAL	9	Unmodified	_LLGVVQVAL_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3009033203125	2	456.299853	910.585153	-0.032958	-1.5039E-05	2.9428	0.0013428	2.9098	0.0013278	456.3010618832383	34.27	2.0114	34.48	34.107	36.119	0.21003					105	50	4	0	0	0	0.5393	1	2584	2584		50.025	5.4935	1	1566600	+		30686	21897	20283	20293	35063	35063					0.1262842283365444
LLGVVVRPWL	10	Unmodified	_LLGVVVRPWL_					0	0	0		ENST00000472718.5_1_3:47844552-47844693:+|nuORF	ENST00000472718.5_1_3:47844552-47844693:+|nuORF	ENST00000472718.5_1_3:47844552-47844693:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	576.3670043945312	2	576.368601	1150.72265	-0.7372	-0.0004249	1.7163	0.00098922	0.9791	0.00056432	576.3694812255828	46.694	1.765	46.68	45.831	47.597	-0.013821					91	46	2	0	0	0	0.8488	1	3816	3816		17.365	0	1	191760			30687	12267	20284	20294	35064	35064					0.15331751433086538
LLGVVVRPWL	10	Unmodified	_LLGVVVRPWL_					0	0	0		ENST00000472718.5_1_3:47844552-47844693:+|nuORF	ENST00000472718.5_1_3:47844552-47844693:+|nuORF	ENST00000472718.5_1_3:47844552-47844693:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	576.3695068359375	2	576.368601	1150.72265	-0.57915	-0.0003338	1.5428	0.00088924	0.96369	0.00055544	576.3693505998824	46.649	1.9596	46.62	45.627	47.586	-0.028782					110	50	3	0	0	0	0.8488	1	3903	3903		17.365	2.5001	1	202090			30688	12267	20284	20294	35065	35065					0.15331751433086538
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8019104003906	2	506.800552	1011.58655	-1.5095	-0.000765	2.422	0.0012274	0.91248	0.00046244	506.8017338500082	46.598	2.104	46.598	45.336	47.44	0					97	57	2	0	0	0	0.78536	1	3507	3507		29.15	3.6994	1	294110			30689	6332	20285	20295	35066	35066					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8004455566406	2	506.800552	1011.58655	-1.3978	-0.00070841	2.5101	0.0012721	1.1123	0.0005637	506.8018833770329	53.841	1.1621	53.841	53.556	54.718	0					55	36	2	0	0	0	0.7932	1	4496	4496		20.947	1.587	1	142170			30690	6332	20285	20295	35067	35067					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8003845214844	2	506.800552	1011.58655	0.18992	9.6251E-05	0.88652	0.00044929	1.0764	0.00054554	506.80099089303076	46.969	1.4152	46.955	46.233	47.648	-0.013817					58	38	2	0	0	0	0.7932	1	3771	3771		23.042	1.0826	1	254450			30691	6332	20285	20295	35068	35068					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7996826171875	2	506.800552	1011.58655	0.018043	9.144E-06	1.4105	0.00071482	1.4285	0.00072396	506.80125221893354	53.037	1.9797	53.034	52.291	54.271	-0.0033035					105	54	3	0	0	0	0.78058	1	4599	4599		30.504	5.0535	1	173240			30692	6332	20285	20295	35069	35069					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8002624511719	2	506.800552	1011.58655	-0.86379	-0.00043777	0.93984	0.00047631	0.076052	3.8543E-05	506.8010240498416	43.849	2.352	43.815	42.486	44.838	-0.033474					86	55	2	0	0	0	0.74721	1	3589	3589		37.159	6.6555	1	326070			30693	6332	20285	20295	35070	35070					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7984924316406	2	506.800552	1011.58655	-0.65008	-0.00032946	1.6125	0.00081723	0.96246	0.00048778	506.8012923744614	46.783	1.6998	46.754	45.886	47.586	-0.028782					74	44	2	0	0	0	0.78058	1	3774	3774		30.504	0	1	223510			30694	6332	20285	20295	35071	35071					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8004455566406	2	506.800552	1011.58655	-0.74642	-0.00037829	1.5683	0.00079484	0.82192	0.00041655	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.78983	2	3694	3675;3694		27.882	0	1	258120			30695	6332	20285	20295	35072;35073	35073					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8000183105469	2	506.800552	1011.58655	-0.49867	-0.00025273	1.4784	0.00074926	0.97973	0.00049653	506.80125930962566	45.611	0.78478	45.623	45.395	46.179	0.012058					40	21	2	0	0	0	0.74721	1	3309	3309		37.159	12.655	1	207840			30696	6332	20285	20295	35074	35074					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8020324707031	2	506.800552	1011.58655	-0.48557	-0.00024609	1.7036	0.00086341	1.2181	0.00061732	506.80138318270446	52.994	1.2868	53.041	52.134	53.421	0.047806					70	43	2	0	0	0	0.78058	2	4230	4230;4263		30.504	5.0535	1	144880			30697	6332	20285	20295	35075;35076	35075					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80096435546875	2	506.800552	1011.58655	0.2918	0.00014788	-0.072545	-3.6766E-05	0.21925	0.00011112	506.8005319323782	43.625	1.7295	43.682	42.323	44.053	0.056747					65	45	2	0	0	0	0.76764	1	2938	2938		34.173	7.3764	1	255230			30698	6332	20285	20295	35077	35077					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80096435546875	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.78536	1	3193	3193		29.15	7.4472	1	412810			30699	6332	20285	20295	35078	35078					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.7981872558594	2	506.800552	1011.58655	0.3226	0.0001635	1.0842	0.00054946	1.4068	0.00071296	506.80101494321997	46.369	1.6079	46.407	46.092	47.7	0.038181					96	46	3	0	0	0	0.78983	1	3453	3453		27.882	3.6795	1	231410			30700	6332	20285	20295	35079	35079					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8011169433594	2	506.800552	1011.58655	0.37466	0.00018988	0.80424	0.00040759	1.1789	0.00059746	506.8009308799893	52.874	1.5356	52.945	51.808	53.344	0.070713					73	47	2	0	0	0	0.78536	1	4278	4278		29.15	1.2673	1	186720			30701	6332	20285	20295	35080	35080					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30609130859375	2	506.800552	1011.58655	0.40005	0.00020275	1.1464	0.00058098	1.5464	0.00078372	506.80113102818973	55.116	1.0184	55.207	54.971	55.989	0.091167					54	31	2	0	0	0	0.20789	1	4665	4665		30.504	23.31	1	154880			30702	6332	20285	20295	35081	35081					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8005065917969	2	506.800552	1011.58655	-0.048814	-2.4739E-05	0.95871	0.00048587	0.90989	0.00046113	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.7932	1	3234	3234		21.96	0.25755	1	475290			30703	6332	20285	20295	35082	35082					0.08122056922411502
LLGWSLPAR	9	Unmodified	_LLGWSLPAR_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000528328.1_1_11:67374475-67374848:+|nuORF;ENST00000532303.5_1_11:67374475-67376046:+|nuORF;ENST00000528548.5_1_11:67374475-67374799:+|nuORF;ENST00000532260.1_1_11:67374475-67374631:+|nuORF;ENST00000525086.5_1_11:67374475-67376939:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8004455566406	2	506.800552	1011.58655	-0.1225	-6.2083E-05	1.1991	0.00060769	1.0766	0.00054561	506.8011249172422	46.216	2.1586	46.137	45.418	47.576	-0.079006					85	63	2	0	0	0	0.77244	2	3384	3384;3557		32.812	8.6097	1	271040			30704	6332	20285	20295	35083;35084	35083					0.08122056922411502
LLGYFTVHTSD	11	Unmodified	_LLGYFTVHTSD_					0	0	0			REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3795776367188	2	626.814053	1251.61355	2.9044	0.0018205	3.1577	0.0019793	6.0621	0.0037998	627.3160232623432	105.89	0.604	105.85	105.58	106.18	-0.03714					20	14	2	0	0	0	0.17431	1	11684	11684		31.53	9.5699	1	201530	+		30705	17004	20286	20296	35085	35085					-0.0021892404770369467
LLGYFTVHTSD	11	Unmodified	_LLGYFTVHTSD_					0	0	0			REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.37939453125	2	626.814053	1251.61355	0.9265	0.00058075	3.7751	0.0023663	4.7016	0.002947	627.3181192121901	105.22	0.1182	105.33	105.23	105.35	0.10766					4	2	2	0	0	0	0.1728	1	11200	11200		31.53	4.8369	1	51715	+		30706	17004	20286	20296	35086	35086					-0.0021892404770369467
LLGYIIANL	9	Unmodified	_LLGYIIANL_					0	0	0			REV__ENSG00000168412|ENST00000307161|MTNR1A	REV__ENSG00000168412|ENST00000307161|MTNR1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.30474853515625	2	495.305136	988.595718	-0.66585	-0.0003298	0.93457	0.0004629	0.26872	0.0001331	495.3054548955284	64.721	0.78749	65.107	64.732	65.519	0.38615					39	18	3	0	0	0	0.5393	1	7011	7011		50.025	4.0523	1	274140	+		30707	21485	20287	20297	35087	35087					0.10096405488093296
LLGYRNLLA	9	Unmodified	_LLGYRNLLA_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.8145141601562	2	516.813659	1031.61277	-1.0727	-0.00055441	2.1212	0.0010962	1.0484	0.00054183	516.8146800707337	36.387	1.5803	36.396	35.568	37.148	0.0092773					63	34	2	0	0	0	0.7932	1	2362	2362		26.796	5.0938	1	103340	+		30708	16310	20288	20298	35088	35088					0.09822326093922129
LLGYSSTQ	8	Unmodified	_LLGYSSTQ_					0	0	0			REV__nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	REV__nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7782897949219	2	434.724175	867.433798	0.43267	0.00018809	2.4097	0.0010476	2.8424	0.0012357	434.72515819721434	34.984	0.58115	35.232	34.934	35.515	0.24769					30	14	3	0	0	0	0.4196	1	2603	2603		15.642	0	1	360990	+		30709	22373	20289	20299	35089	35089					-0.005221832648544478
LLHCIRTTKD	10	Unmodified	_LLHCIRTTKD_					0	0	0			REV__ENST00000413670.2_1_1:98510427-98510946:-|nuORF	REV__ENST00000413670.2_1_1:98510427-98510946:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.55859375	3	400.557019	1198.64923	-0.40131	-0.00016075	4.0909	0.0016386	3.6896	0.0014779	400.55857592859013	19.576	0.65935	19.502	19.226	19.886	-0.073704					41	18	3	0	0	0	0.85694	1	460	460		15.333	0	1	413560	+		30710	26395	20290	20300	35090	35090					0.057848349282721756
LLHDNPALK	9	Unmodified	_LLHDNPALK_					0	0	0			REV__nc|ENSG00000175556|Q496Y0-3|LONRF3	REV__nc|ENSG00000175556|Q496Y0-3|LONRF3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.781982421875	2	510.795466	1019.57638	-0.063222	-3.2294E-05	-1.1082	-0.00056607	-1.1714	-0.00059836	510.79484210950915	26.35	0.43519	26.312	26.096	26.532	-0.038523					12	8	2	0	0	0	0.20789	1	1173	1173		35.618	0	1	26522	+		30711	22072	20291	20301	35091	35091					0.06737449197180467
LLHDPAVH	8	Unmodified	_LLHDPAVH_					0	0	0			REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1	REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2472839355469	2	451.248152	900.481751	-0.10221	-4.6121E-05	1.3002	0.00058673	1.198	0.00054061	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.86791	1	6440	6440		28.254	1.5614	1	178200	+		30712	22783	20292	20302	35092	35092					0.027529354458465605
LLHEAEALY	9	Unmodified	_LLHEAEALY_					0	0	0		nc|ENSG00000135637|Q17RM4-3|CCDC142;nc|ENSG00000135637|Q17RM4-2|CCDC142;ENSG00000135637|ENST00000393965|CCDC142;ENST00000497232.5_1_2:74702580-74708169:-|nuORF	nc|ENSG00000135637|Q17RM4-3|CCDC142	nc|ENSG00000135637|Q17RM4-3|CCDC142	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.7809448242188	2	529.779482	1057.54441	-0.036677	-1.9431E-05	-0.02852	-1.5109E-05	-0.065197	-3.454E-05	529.7793029461789	64.6	1.1094	64.603	64.064	65.173	0.0021362					72	32	4	0	0	0	0.72402	1	6073	6073		38.806	8.4884	1	265940			30713	4042	20293	20303	35093	35093					0.017940367233904908
LLHESDGVL	9	Unmodified	_LLHESDGVL_					0	0	0		nc|ENSG00000130338|Q9NRJ4-2|TULP4;ENSG00000130338|ENST00000367097|TULP4	nc|ENSG00000130338|Q9NRJ4-2|TULP4	nc|ENSG00000130338|Q9NRJ4-2|TULP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.763916015625	2	491.763832	981.513111	-0.79496	-0.00039093	0.20911	0.00010283	-0.58585	-0.0002881	491.7638392443188	49.097	1.1695	49.557	48.985	50.155	0.45983					77	28	5	0	0	0	0.69914	1	4743	4743		40.573	1.7665	1	5885400			30714	3637	20294	20304	35094	35094					0.02161463689287757
LLHESLDS	8	Unmodified	_LLHESLDS_					0	0	0		nc|ENSG00000249961|Q8NA31-3|TERB1;nc|ENSG00000249961|Q8NA31-2|TERB1;ENSG00000249961|ENST00000433154|TERB1	nc|ENSG00000249961|Q8NA31-3|TERB1	nc|ENSG00000249961|Q8NA31-3|TERB1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2637939453125	2	457.234907	912.455261	0.2483	0.00011353	-0.31991	-0.00014627	-0.071606	-3.2741E-05	457.2349634885797	79.27	0.24223	79.324	79.159	79.401	0.053841					8	6	2	0	0	0	0.4196	1	7811	7811		35.201	6.9464	1	50903			30715	8842	20295	20305	35095	35095					-0.004467982361461509
LLHFCKLFL	9	Unmodified	_LLHFCKLFL_					0	0	0			REV__ENST00000252725.9_1_7:98992108-98992360:+|nuORF	REV__ENST00000252725.9_1_7:98992108-98992360:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.8316650390625	2	567.33063	1132.64671	1.9149	0.0010864	-2.3971	-0.00136	-0.48217	-0.00027355	567.3293271441571	103.38	0.97102	103.61	103.31	104.28	0.22556					36	23	2	0	0	0	0.20789	1	12578	12578		33.516	1.5607	1	586580	+		30716	24297	20296	20306	35096	35096					0.08569031261276905
LLHFLRGG	8	Unmodified	_LLHFLRGG_					0	0	0		ENST00000420503.1_1_1:22352034-22356862:+|nuORF	ENST00000420503.1_1_1:22352034-22356862:+|nuORF	ENST00000420503.1_1_1:22352034-22356862:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.772705078125	2	456.774337	911.534121	-1.1567	-0.00052834	-3.149	-0.0014384	-4.3057	-0.0019667	456.7726883987969	89.791	2.1769	90.003	88.879	91.056	0.21271					109	51	4	0	0	0	0.89457	1	8953	8953		37.028	6.5248	1	1072500			30717	11453	20297	20307	35097	35097					0.07481518579470503
LLHFPDLAALP	11	Unmodified	_LLHFPDLAALP_					0	0	0		ENSG00000137507|ENST00000260061|LRRC32	ENSG00000137507|ENST00000260061|LRRC32	ENSG00000137507|ENST00000260061|LRRC32	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.89569091796875	3	402.900891	1205.68084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.02	1	111.95	111.45	112.45	-0.063889								0	0	0	0.56276	1	12185	12185		14.694	5.8944	1				30718	4209	20298	20308	35098	35098					0.08623150953872027
LLHHAIPK	8	Unmodified	_LLHHAIPK_					0	0	0			REV__ENSG00000134262|ENST00000369569|AP4B1	REV__ENSG00000134262|ENST00000369569|AP4B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.7904357910156	2	464.789987	927.565421	-0.014658	-6.8129E-06	1.5846	0.00073649	1.5699	0.00072967	464.7906118209948	36.96	1.5179	36.936	36.1	37.617	-0.023979					72	33	3	0	0	0	0.81548	1	2353	2353		20.482	1.1219	1	237030	+		30719	19127	20299	20309	35099	35099					0.09874091613539804
LLHHAIPK	8	Unmodified	_LLHHAIPK_					0	0	0			REV__ENSG00000134262|ENST00000369569|AP4B1	REV__ENSG00000134262|ENST00000369569|AP4B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.7904052734375	2	464.789987	927.565421	0.2474	0.00011499	1.4296	0.00066449	1.677	0.00077947	464.7904221539816	34.07	1.6806	34.28	33.524	35.204	0.21003					97	40	4	0	0	0	0.86288	1	2519	2519		26.796	0	1	944210	+		30720	19127	20299	20309	35100	35100					0.09874091613539804
LLHHANIE	8	Unmodified	_LLHHANIE_					0	0	0		nc|ENSG00000261239|Q6NSI1|ANKRD26P1	nc|ENSG00000261239|Q6NSI1|ANKRD26P1	nc|ENSG00000261239|Q6NSI1|ANKRD26P1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.7589416503906	2	473.758884	945.503215	0.75968	0.0003599	0.44573	0.00021117	1.2054	0.00057107	473.7590702725791	22.845	0.86935	22.905	22.46	23.329	0.060431					38	32	2	0	0	0	0.87922	1	706	706		31.955	0	1	28931			30721	15304	20300	20310	35101	35101					0.02828320474566226
LLHHHAILLLN	11	Unmodified	_LLHHHAILLLN_					0	0	0			REV__nc|ENSG00000204148|Q9P2X8|LINC00474	REV__nc|ENSG00000204148|Q9P2X8|LINC00474	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2395324707031	3	431.931185	1292.77173	-0.98612	-0.00042593	-4.2079	-0.0018175	-5.194	-0.0022434	432.26311655188204	58.943	0.25184	59.335	59.191	59.443	0.39209					8	5	2	0	0	0	0.17305	1	6171	6171		13.508	0	1	73290	+		30722	30157	20301	20311	35102	35102					0.1370503972204915
LLHIATQS	8	Unmodified	_LLHIATQS_					0	0	0		ENST00000476766.5_1_10:102747125-102750779:+|nuORF	ENST00000476766.5_1_10:102747125-102750779:+|nuORF	ENST00000476766.5_1_10:102747125-102750779:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.24072265625	2	441.75581	881.497067	-1.4304	-0.0006319	-1.7232	-0.00076123	-3.1536	-0.0013931	441.7563768022074	82.204	0.20299	82.359	82.221	82.424	0.15474					5	4	2	0	0	0	0.4196	1	7888	7888		12.207	0.69583	1	12158			30723	12344	20302	20312	35103	35103					0.05157802243047627
LLHIPGPATTG	11	Unmodified	_LLHIPGPATTG_					0	0	0			REV__ENST00000528037.1_1_11:61891511-61905356:+|nuORF	REV__ENST00000528037.1_1_11:61891511-61905356:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.8067626953125	2	538.808574	1075.60259	-1.4886	-0.00080208	-1.9733	-0.0010633	-3.462	-0.0018653	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.7342	1	9055	9055		25.574	0	1	783690	+		30724	20174	20303	20313	35104	35104					0.06781718368642942
LLHIQRILYI	10	Unmodified	_LLHIQRILYI_					0	0	0		ENST00000336079.7_1_Y:15031548-15031635:+|nuORF	ENST00000336079.7_1_Y:15031548-15031635:+|nuORF	ENST00000336079.7_1_Y:15031548-15031635:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.402099609375	2	641.405715	1280.79688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.4	1	111.47	110.97	111.97	0.069542								0	0	0	0.45132	1	11988	11988		17.365	0.64758	1				30725	10165	20304	20314	35105	35105					0.16771094524619912
LLHIRIIGRPL	11	Unmodified	_LLHIRIIGRPL_					0	0	0			REV__ENSG00000139641|ENST00000394048|ESYT1	REV__ENSG00000139641|ENST00000394048|ESYT1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.28662109375	3	434.290713	1299.85031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.949	1	53.944	53.444	54.444	-0.0053711								0	0	0	0.56276	1	4742	4742		18.531	4.445	1		+		30726	19558	20305	20315	35106	35106					0.21237892027124872
LLHIVPIRIW	10	Unmodified	_LLHIVPIRIW_					0	0	0			REV__ENST00000495070.2_1_1:155955164-155959287:-|nuORF	REV__ENST00000495070.2_1_1:155955164-155959287:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.755126953125	3	420.604409	1258.7914	-1.8968	-0.00079782	-1.9147	-0.00080532	-3.8115	-0.0016031	420.60378051743714	20.82	0.26202	20.866	20.635	20.897	0.045401					14	12	2	0	0	0	0.37624	1	517	517		17.468	2.7743	1	61605	+		30727	27730	20306	20316	35107	35107					0.17235415732784531
LLHKDKSKRSA	11	Unmodified	_LLHKDKSKRSA_					0	0	0		nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;ENSG00000061273|ENST00000080059|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;ENST00000425451.2_1_12:48189548-48213588:-|nuORF	nc|ENSG00000061273|Q8WUI4-3|HDAC7	nc|ENSG00000061273|Q8WUI4-3|HDAC7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8826904296875	2	641.883136	1281.75172	0.91411	0.00058675	-1.9967	-0.0012817	-1.0826	-0.00069492	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.7144	1	10232	10232		29.17	3.596	1	4136300			30728	1072	20307	20317	35108	35108					0.12211243991418996
LLHKFTKKFT	10	Unmodified	_LLHKFTKKFT_					0	0	0			REV__ENSG00000181072|ENST00000680005|CHRM2	REV__ENSG00000181072|ENST00000680005|CHRM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.93035888671875	3	421.592169	1261.75468	2.8321	0.001194	3.0322	0.0012783	5.8643	0.0024723	421.59334720689543	16.004	0.20915	15.92	15.824	16.033	-0.083364					17	8	3	0	0	0	0.85834	1	99	99		22.58	4.7465	1	86123	+		30729	22439	20308	20318	35109	35109					0.13427119116204267
LLHKLDIGF	9	Unmodified	_LLHKLDIGF_					0	0	0		ENST00000547997.5_1_12:95650374-95694446:+|nuORF;ENST00000552660.5_1_12:95650374-95694446:+|nuORF;ENSG00000028203|ENST00000436874|VEZT;ENST00000424779.1_1_X:46316207-46316545:-|nuORF;ENST00000548455.5_1_12:95650374-95660159:+|nuORF;ENST00000550106.5_1_12:95650374-95668525:+|nuORF;ENST00000546398.5_1_12:95611596-95687545:+|nuORF;ENST00000549192.5_1_12:95650374-95690042:+|nuORF;nc|ENSG00000028203|Q9HBM0-2|VEZT	ENST00000547997.5_1_12:95650374-95694446:+|nuORF	ENST00000547997.5_1_12:95650374-95694446:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.3134765625	2	528.316035	1054.61752	0.80818	0.00042697	-4.3231	-0.002284	-3.5149	-0.001857	528.3138274474713	98.246	1.1968	98.407	97.84	99.037	0.16074					66	26	4	0	0	0	0.7932	1	10185	10185		24.203	1.1603	1	380980			30730	876	20309	20319	35110	35110					0.09239210236660256
LLHKVKLGTT	10	Unmodified	_LLHKVKLGTT_					0	0	0			REV__ENSG00000152104|ENST00000366956|PTPN14	REV__ENSG00000152104|ENST00000366956|PTPN14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.3534545898438	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.85694	1	10618	10618		21.96	3.6978	1	5963400	+		30731	20285	20310	20320	35111	35111					0.14682857190791765
LLHLKGFAN	9	Unmodified	_LLHLKGFAN_					0	0	0			REV__chr13:87672825-87675381|28|19.89|0.2|6.63|+|ENST00000325089|SLITRK5,SLITRK5	REV__chr13:87672825-87675381|28|19.89|0.2|6.63|+|ENST00000325089|SLITRK5,SLITRK5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8006591796875	2	506.800552	1011.58655	0.38439	0.00019481	0.96921	0.00049119	1.3536	0.000686	506.80097431464225	53.444	1.0595	53.515	53.221	54.281	0.070709					58	27	3	0	0	0	0.7932	1	4373	4373		26.796	5.0938	1	177670	+		30732	15581	20311	20321	35112	35112					0.08122056922411502
LLHLLRRHKHR	11	Unmodified	_LLHLLRRHKHR_					0	0	0		ENST00000451963.1_2_7:99818153-99818871:+|nuORF;ENSG00000213413|ENST00000699088|PVRIG;nc|ENSG00000213413|Q6DKI7|PVRIG	ENST00000451963.1_2_7:99818153-99818871:+|nuORF	ENST00000451963.1_2_7:99818153-99818871:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.6501770019531	3	493.647894	1477.92185	-0.090194	-4.4524E-05	3.7222	0.0018375	3.632	0.0017929	493.64966914482096	44.463	1.6429	44.405	43.685	45.328	-0.058258					115	39	4	0	0	0	0.76579	1	3198	3198		18.531	8.8849	1	603320			30733	8589	20312	20322	35113	35113					0.20200824504308912
LLHLRPMPV	9	Unmodified	_LLHLRPMPV_					0	0	0		chr1:11950520-11950622|24|22.08|0.25|6.47|+|0|TE_info:L2,L2_dup192,L2,LINE,acceptor,+,11950622,11950799|PLOD1,None|4	chr1:11950520-11950622|24|22.08|0.25|6.47|+|0|TE_info:L2,L2_dup192,L2,LINE,acceptor,+,11950622,11950799|PLOD1,None|4	chr1:11950520-11950622|24|22.08|0.25|6.47|+|0|TE_info:L2,L2_dup192,L2,LINE,acceptor,+,11950622,11950799|PLOD1,None|4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3265991210938	2	538.325879	1074.63721	-1.4902	-0.0008022	4.1746	0.0022473	2.6844	0.0014451	538.3280364010775	103.36	1.0546	103.48	103.07	104.12	0.11495					72	26	3	0	0	0	0.7932	1	10826	10826		25.45	0.93098	1	1412200			30734	18	20313	20323	35114	35114					0.10287262975771228
LLHPGPLRIHR	11	Unmodified	_LLHPGPLRIHR_					0	0	0			REV__ENST00000372476.7_1_1:43773103-43773491:+|nuORF	REV__ENST00000372476.7_1_1:43773103-43773491:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.9401550292969	3	436.938562	1307.79386	0.92934	0.00040606	0.9417	0.00041147	1.871	0.00081753	437.27287153455126	55.326	1.2948	55.353	54.851	56.146	0.027142					42	32	2	0	0	0	0.76579	1	4966	4966		18.531	0	1	482690	+		30735	25720	20314	20324	35115	35115					0.15227264190434653
LLHPKLGLT	9	Unmodified	_LLHPKLGLT_					0	0	0			REV__ENST00000495014.5_1_10:135207724-135213140:+|nuORF	REV__ENST00000495014.5_1_10:135207724-135213140:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.3179626464844	2	496.318577	990.622602	-0.26266	-0.00013036	0.28862	0.00014325	0.025961	1.2885E-05	496.31871000594134	19.705	0.46872	19.631	19.507	19.975	-0.073704					18	14	2	0	0	0	0.78536	1	463	463		29.15	8.2026	1	25212	+		30736	20139	20315	20325	35116	35116					0.1269151409925371
LLHPLHGPK	9	Unmodified	_LLHPLHGPK_					0	0	0			REV__ENSG00000135749|ENST00000258229|PCNX2	REV__ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.308837890625	2	506.308544	1010.60253	0.14716	7.451E-05	1.3286	0.00067268	1.4758	0.00074719	506.3091725658314	48.035	0.66149	48.026	47.852	48.514	-0.0093269					22	16	2	0	0	0	0.76402	1	3948	3948		35.201	7.3185	1	152010	+		30737	19245	20316	20326	35117	35117					0.09765763159327889
LLHPLHGPK	9	Unmodified	_LLHPLHGPK_					0	0	0			REV__ENSG00000135749|ENST00000258229|PCNX2	REV__ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30609130859375	2	506.308544	1010.60253	0.40486	0.00020498	0.61276	0.00031025	1.0176	0.00051523	506.30888331142467	56.209	0.70053	56.309	55.673	56.373	0.099186					45	29	2	0	0	0	0.76402	1	4665	4665		35.201	1.0282	1	200050	+		30738	19245	20316	20326	35118	35118					0.09765763159327889
LLHPLHGPK	9	Unmodified	_LLHPLHGPK_					0	0	0			REV__ENSG00000135749|ENST00000258229|PCNX2	REV__ENSG00000135749|ENST00000258229|PCNX2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	506.308544	1010.60253	1.0843	0.00054899	-0.68702	-0.00034784	0.39728	0.00020115	506.30839735141876	55.584	0.62215	56.152	55.7	56.322	0.56836	-0.078159	-0.00080146	NaN	35.201	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119900	+		30739	19245	20316	20326							0.09765763159327889
LLHPLRTY	8	Unmodified	_LLHPLRTY_					0	0	0			REV__ENSG00000164068|ENST00000327697|RNF123	REV__ENSG00000164068|ENST00000327697|RNF123	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8011474609375	2	506.800552	1011.58655	-0.74642	-0.00037829	1.5683	0.00079484	0.82192	0.00041655	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.87922	1	3662	3662		31.955	8.9124	1	258120	+		30740	21022	20317	20327	35119	35119					0.08122056922422871
LLHRAFSVF	9	Unmodified	_LLHRAFSVF_					0	0	0		nc|ENSG00000067064|Q13907|IDI1;ENSG00000067064|ENST00000381344|IDI1	nc|ENSG00000067064|Q13907|IDI1	nc|ENSG00000067064|Q13907|IDI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3167114257812	2	545.313826	1088.6131	1.9901	0.0010853	3.2821	0.0017898	5.2723	0.0028751	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.64922	1	9300	9300		44.117	3.3386	1	4704900			30741	1174	20318	20328	35120	35120					0.0723374581373264
LLHRAFSVF	9	Unmodified	_LLHRAFSVF_					0	0	0		nc|ENSG00000067064|Q13907|IDI1;ENSG00000067064|ENST00000381344|IDI1	nc|ENSG00000067064|Q13907|IDI1	nc|ENSG00000067064|Q13907|IDI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3163452148438	2	545.313826	1088.6131	2.6012	0.0014185	2.8909	0.0015765	5.4922	0.0029949	545.3152041315631	102.23	0.80855	102.53	102.13	102.94	0.29864					51	18	4	0	0	0	0.78536	1	12451	12451		29.15	0	1	936620			30742	1174	20318	20328	35121	35121					0.0723374581373264
LLHRGLPGGR	10	Unmodified	_LLHRGLPGGR_					0	0	0		nc|ENSG00000165816|Q5GFL6-2|VWA2;ENSG00000165816|ENST00000392982|VWA2	nc|ENSG00000165816|Q5GFL6-2|VWA2	nc|ENSG00000165816|Q5GFL6-2|VWA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3264770507812	2	538.327799	1074.64105	-0.51586	-0.0002777	-0.78454	-0.00042234	-1.3004	-0.00070004	538.3275058895035	107.82	0.98666	107.82	106.89	107.87	0					48	23	3	0	0	0	0.85466	1	11099	11099		20.947	0	1	4352400			30743	6129	20319	20329	35122	35122					0.10671068793840277
LLHRHSRGG	9	Unmodified	_LLHRHSRGG_					0	0	0		ENST00000296564.8_2_5:5462731-5462767:+|nuORF	ENST00000296564.8_2_5:5462731-5462767:+|nuORF	ENST00000296564.8_2_5:5462731-5462767:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.794189453125	2	516.794124	1031.57369	-0.047699	-2.465E-05	-1.4322	-0.00074013	-1.4799	-0.00076478	516.793282030647	86.386	2.8071	86.453	84.68	87.487	0.067436					129	64	3	0	0	0	0.76764	1	8730	8730		34.173	2.2177	1	264930			30744	9742	20320	20330	35123	35123					0.05917038582902023
LLHRLEVISN	10	Unmodified	_LLHRLEVISN_					0	0	0			REV__ENSG00000151466|ENST00000281142|SCLT1	REV__ENSG00000151466|ENST00000281142|SCLT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8563232421875	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.51302	1	9803	9803		54.776	11.912	1	18777000	+		30745	20250	20321	20331	35124	35124					0.10416767697097384
LLHRLKREE	9	Unmodified	_LLHRLKREE_					0	0	0			REV__nc|ENSG00000144488|Q6ZVH7-2|ESPNL	REV__nc|ENSG00000144488|Q6ZVH7-2|ESPNL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.3579711914062	2	597.359296	1192.70404	0.94282	0.0005632	-2.9089	-0.0017377	-1.9661	-0.0011744	597.3571269689473	100.1	2.8225	100.31	99.04	101.86	0.21512					167	67	4	0	0	0	0.77696	1	10491	10491		31.53	0.96095	1	2588300	+		30746	19895	20322	20332	35125	35125					0.11539589791209437
LLHRLWRSRRR	11	Unmodified	_LLHRLWRSRRR_					0	0	0		ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.8009643554688	3	516.986798	1547.93856	-0.51703	-0.0002673	-2.1233	-0.0010977	-2.6403	-0.001365	516.985556718753	56.995	0.48196	57.028	56.729	57.211	0.033184					17	14	2	0	0	0	0.18238	1	5164	5164		5.6988	0	1	135550			30747	10991	20323	20333	35126	35126					0.18651325390260354
LLHRRRAP	8	Unmodified	_LLHRRRAP_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.63372802734375	2	509.822684	1017.63082	-1.583	-0.00080705	-0.14945	-7.6193E-05	-1.7325	-0.00088324	509.82273385063917	103.81	0.68893	103.93	103.69	104.38	0.11495					25	16	2	0	0	0	0.4196	1	10974	10974		21.702	7.0382	1	77731	+		30748	20385	20324	20334	35127	35127					0.12270505859260084
LLHRRRRWRQR	11	Unmodified	_LLHRRRRWRQR_					0	0	0			REV__ENST00000372724.5_1_10:76586363-76598485:+|nuORF	REV__ENST00000372724.5_1_10:76586363-76598485:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.31640625	3	545.00133	1631.98216	-0.97349	-0.00053055	0.78671	0.00042876	-0.18678	-0.00010179	545.0017466931979	92.169	1.2341	92.632	91.977	93.211	0.46249					43	28	2	0	0	0	0.181	1	10979	10979		13.508	7.1871	1	193280	+		30749	25727	20325	20335	35128	35128					0.19144934887413
LLHTLVPRAPT	11	Unmodified	_LLHTLVPRAPT_					0	0	0			REV__ENSG00000185803|ENST00000643944|SLC52A2	REV__ENSG00000185803|ENST00000643944|SLC52A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.583984375	3	406.583674	1216.72919	-1.927	-0.00078348	2.7576	0.0011212	0.83063	0.00033772	406.58477414221215	112.11	0.72639	112.09	111.83	112.55	-0.01989					36	23	2	0	0	0	0.72892	1	11955	11955		26.75	6.7529	1	4313100	+		30750	22794	20326	20336	35129	35129					0.1294964459377752
LLHVKDLEFLL	11	Unmodified	_LLHVKDLEFLL_					0	0	0		nc|ENSG00000178125|Q7Z4L9-2|PPP1R42;ENSG00000178125|ENST00000685739|PPP1R42;nc|ENSG00000178125|Q7Z4L9|PPP1R42	nc|ENSG00000178125|Q7Z4L9-2|PPP1R42	nc|ENSG00000178125|Q7Z4L9-2|PPP1R42	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.2744445800781	3	447.270984	1338.79112	2.748	0.0012291	1.3118	0.00058674	4.0598	0.0018158	447.27148035991394	107.89	0.36398	107.85	107.55	107.92	-0.031487					34	8	5	0	0	0	0.71207	1	11951	11951		29.551	2.801	1	23752000			30751	7186	20327	20337	35130	35130					0.13527951222295087
LLHVKDLEFLL	11	Unmodified	_LLHVKDLEFLL_					0	0	0		nc|ENSG00000178125|Q7Z4L9-2|PPP1R42;ENSG00000178125|ENST00000685739|PPP1R42;nc|ENSG00000178125|Q7Z4L9|PPP1R42	nc|ENSG00000178125|Q7Z4L9-2|PPP1R42	nc|ENSG00000178125|Q7Z4L9-2|PPP1R42	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	447.27288818359375	3	447.270984	1338.79112	1.5065	0.00067383	2.9414	0.0013156	4.4479	0.0019894	447.2722212442837	107.85	0.45378	107.88	107.52	107.97	0.035622					35	10	5	0	0	0	0.76579	1	11849	11849		18.531	0.69791	1	25250000			30752	7186	20327	20337	35131	35131					0.13527951222295087
LLHVKDLEFLL	11	Unmodified	_LLHVKDLEFLL_					0	0	0		nc|ENSG00000178125|Q7Z4L9-2|PPP1R42;ENSG00000178125|ENST00000685739|PPP1R42;nc|ENSG00000178125|Q7Z4L9|PPP1R42	nc|ENSG00000178125|Q7Z4L9-2|PPP1R42	nc|ENSG00000178125|Q7Z4L9-2|PPP1R42	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.27276611328125	3	447.270984	1338.79112	0.74994	0.00033543	3.4289	0.0015336	4.1788	0.0018691	447.27246467576646	106.88	1.1653	106.97	106.51	107.68	0.091255					134	27	6	0	0	0	0.74022	1	11483	11483		24.232	0	1	19906000			30753	7186	20327	20337	35132	35132					0.13527951222295087
LLHYRLLLRRL	11	Unmodified	_LLHYRLLLRRL_					0	0	0		ENSG00000006607|ENST00000264042|FARP2	ENSG00000006607|ENST00000264042|FARP2	ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.3175354003906	3	489.320784	1464.94052	-1.9765	-0.00096714	-2.9518	-0.0014444	-4.9283	-0.0024115	489.3194578450995	16.707	0.39843	16.707	16.493	16.892	0					35	17	3	0	0	0	0.81219	1	139	139		8.7993	5.3906	1	55555			30754	704	20328	20338	35133	35133					0.2266494135553785
LLIAFPVMA	9	Unmodified	_LLIAFPVMA_					0	0	0			REV__ENSG00000205639|ENST00000338315|MFSD2B	REV__ENSG00000205639|ENST00000338315|MFSD2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7904357910156	2	487.790807	973.56706	-0.084631	-4.1282E-05	0.40135	0.00019578	0.31672	0.00015449	487.79098536124866	97.562	1.063	97.619	97.163	98.226	0.056839					59	24	3	0	0	0	0.78292	1	10303	10303		29.842	0	1	426140	+		30755	23568	20329	20339	35134	35134					0.0792196458729677
LLIAKNLVLKK	11	Unmodified	_LLIAKNLVLKK_					0	0	0			REV__ENSG00000218819|ENST00000405799|TDRD15	REV__ENSG00000218819|ENST00000405799|TDRD15	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2980041503906	3	418.295353	1251.86423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.099	1	76.494	75.994	76.994	0.39507								0	0	0	0.56276	1	8627	8627		12.433	7.0199	1		+		30756	23699	20330	20340	35135	35135					0.24837124735518046
LLIAKNLVLKK	11	Unmodified	_LLIAKNLVLKK_					0	0	0			REV__ENSG00000218819|ENST00000405799|TDRD15	REV__ENSG00000218819|ENST00000405799|TDRD15	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.29827880859375	3	418.295353	1251.86423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.149	1	77.548	77.048	78.048	0.39969								0	0	0	0.56276	1	8771	8771		6.001	0.30226	1		+		30757	23699	20330	20340	35136	35136					0.24837124735518046
LLIAKYGPVS	10	Unmodified	_LLIAKYGPVS_					0	0	0			REV__chr6:169705321-169710236|13|17.69|0.71|4.65|-|0|PHF10,PHF10|1	REV__chr6:169705321-169710236|13|17.69|0.71|4.65|-|0|PHF10,PHF10|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.82080078125	2	530.823692	1059.63283	-1.2397	-0.00065807	-4.086	-0.002169	-5.3257	-0.002827	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.86718	1	7606	7606		27.882	0	1	869100	+		30758	15877	20331	20341	35137	35137					0.10540077033851958
LLIALLCIC	9	Unmodified	_LLIALLCIC_					0	0	0		ENST00000599145.1_1_19:58927211-58927334:+|nuORF	ENST00000599145.1_1_19:58927211-58927334:+|nuORF	ENST00000599145.1_1_19:58927211-58927334:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7911376953125	2	487.792492	973.570431	-0.084631	-4.1282E-05	-3.0538	-0.0014896	-3.1385	-0.0015309	487.79098536124866	97.562	1.063	97.619	97.163	98.226	0.056839					59	24	3	0	0	0	0.78292	1	10291	10291		29.842	0	1	426140			30759	14370	20332	20342	35138	35138					0.08258891369632693
LLIAPSSY	8	Unmodified	_LLIAPSSY_					0	0	0			REV__ENSG00000115339|ENST00000392701|GALNT3	REV__ENSG00000115339|ENST00000392701|GALNT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2469177246094	2	432.247286	862.48002	1.4323	0.0006191	-2.1406	-0.00092526	-0.70829	-0.00030616	432.2464138290426	97.895	1.475	98.281	97.765	99.24	0.38548					115	35	5	0	0	0	0.92774	1	11771	11771		49.211	4.6797	1	6652700	+		30760	18111	20333	20343	35139	35139					0.04327881637232167
LLIAPSSY	8	Unmodified	_LLIAPSSY_					0	0	0			REV__ENSG00000115339|ENST00000392701|GALNT3	REV__ENSG00000115339|ENST00000392701|GALNT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.2470703125	2	432.247286	862.48002	1.6286	0.00070397	-2.2133	-0.00095671	-0.58472	-0.00025274	432.24636827465696	97.973	1.4306	98.35	97.873	99.304	0.37679					103	34	5	0	0	0	0.92176	1	11832	11832		46.766	2.2354	1	6519900	+		30761	18111	20333	20343	35140	35140					0.04327881637232167
LLIAVKGR	8	Unmodified	_LLIAVKGR_					0	0	0		ENST00000581241.5_1_17:80202588-80203882:-|nuORF	ENST00000581241.5_1_17:80202588-80203882:-|nuORF	ENST00000581241.5_1_17:80202588-80203882:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3000183105469	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.82419	1	6478	6478		13.775	0	1	1819800			30762	14103	20334	20344	35141	35141					0.14627262273370434
LLIAVKGR	8	Unmodified	_LLIAVKGR_					0	0	0		ENST00000581241.5_1_17:80202588-80203882:-|nuORF	ENST00000581241.5_1_17:80202588-80203882:-|nuORF	ENST00000581241.5_1_17:80202588-80203882:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3004150390625	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.81548	4	7788	7704;7776;7788;7943		20.482	5.8177	1	5485100			30763	14103	20334	20344	35142;35143;35144;35145	35144					0.14627262273370434
LLIAVKGR	8	Unmodified	_LLIAVKGR_					0	0	0		ENST00000581241.5_1_17:80202588-80203882:-|nuORF	ENST00000581241.5_1_17:80202588-80203882:-|nuORF	ENST00000581241.5_1_17:80202588-80203882:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30023193359375	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.82464	3	8401	8017;8149;8401		21.702	6.0661	1	6323600			30764	14103	20334	20344	35146;35147;35148	35148					0.14627262273370434
LLIAYFRIKLI	11	Unmodified	_LLIAYFRIKLI_					0	0	0		ENSG00000256162|ENST00000541421|SMLR1	ENSG00000256162|ENST00000541421|SMLR1	ENSG00000256162|ENST00000541421|SMLR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.9667663574219	3	454.967236	1361.87988	-2.4763	-0.0011267	0.29631	0.00013481	-2.18	-0.00099184	454.9672822128271	40.296	0.82854	40.688	40.337	41.165	0.39209					69	22	4	0	0	0	0.78391	1	3417	3417		14.694	4.1069	1	12658000			30765	8893	20335	20345	35149	35149					0.2134141125259248
LLIAYFRIKLI	11	Unmodified	_LLIAYFRIKLI_					0	0	0		ENSG00000256162|ENST00000541421|SMLR1	ENSG00000256162|ENST00000541421|SMLR1	ENSG00000256162|ENST00000541421|SMLR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.9660949707031	3	454.967236	1361.87988	-3.0236	-0.0013756	1.3763	0.00062619	-1.6472	-0.00074943	454.96769809501745	41.183	0.94011	41.575	41.202	42.142	0.39209					77	25	4	0	0	0	0.78683	1	3586	3586		14.086	1.1285	1	7191500			30766	8893	20335	20345	35150	35150					0.2134141125259248
LLICLTWL	8	Unmodified	_LLICLTWL_					0	0	0		ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-2|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906799316406	2	487.790807	973.56706	-0.085708	-4.1808E-05	-0.51587	-0.00025164	-0.60158	-0.00029345	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.87276	1	8096	8096		29.842	0	1	514950			30767	6878	20336	20346	35151	35151					0.07921964587285402
LLICLTWL	8	Unmodified	_LLICLTWL_					0	0	0		ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-2|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.79095458984375	2	487.790807	973.56706	-0.085473	-4.1693E-05	-0.2767	-0.00013497	-0.36217	-0.00017666	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.87276	1	8651	8651		29.842	1.5873	1	1889700			30768	6878	20336	20346	35152	35152					0.07921964587285402
LLIEVIPQT	9	Unmodified	_LLIEVIPQT_					0	0	0			REV__ENSG00000102547|ENST00000409308|CAB39L	REV__ENSG00000102547|ENST00000409308|CAB39L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3184204101562	2	513.3157	1024.61685	-0.56742	-0.00029127	2.501	0.0012838	1.9336	0.00099254	513.8184352321304	55.37	1.1164	55.4	54.998	56.114	0.030838					47	27	2	0	0	0	0.62081	1	4978	4978		45.952	3.5558	1	233220	+		30769	17346	20337	20347	35153	35153					0.10552370796949617
LLIFEIQR	8	Unmodified	_LLIFEIQR_					0	0	0			REV__ENSG00000184954|ENST00000327335|OR6C70	REV__ENSG00000184954|ENST00000327335|OR6C70	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3134765625	2	516.316035	1030.61752	-0.047037	-2.4286E-05	-3.4337	-0.0017729	-3.4807	-0.0017972	516.3142012916925	102.4	1.3625	102.42	101.73	103.09	0.01989					76	32	3	0	0	0	0.884	1	10989	10989		33.516	0	1	772400	+		30770	22715	20338	20348	35154	35154					0.10343210236646883
LLIFETLITC	10	Unmodified	_LLIFETLITC_					0	0	0			REV__ENSG00000172457|ENST00000641668|OR9G4	REV__ENSG00000172457|ENST00000641668|OR9G4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.353759765625	2	583.330493	1164.64643	0.073026	4.2598E-05	4.3737	0.0025513	4.4467	0.0025939	583.3324653025213	103.3	0.19812	103.34	103.24	103.43	0.041481					7	4	2	0	0	0	0.37624	1	11208	11208		30.504	0	1	106590	+		30771	21832	20339	20349	35155	35155					0.07069566750783451
LLIFPILLY	9	Unmodified	_LLIFPILLY_					0	0	0			REV__ENSG00000109084|ENST00000226230|TMEM97	REV__ENSG00000109084|ENST00000226230|TMEM97	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.7798461914062	2	552.857004	1103.69945	-1.2448	-0.0006882	-2.6377	-0.0014583	-3.8825	-0.0021465	552.8556182005545	60.133	0.75454	60.524	60.254	61.009	0.39077					34	20	2	0	0	0	0.20789	1	6389	6389		39.021	0	1	615730	+		30772	17746	20340	20350	35156	35156					0.1517531259576117
LLIFTPSPRDS	11	Unmodified	_LLIFTPSPRDS_					0	0	0		ENST00000398117.1_1_18:60986541-60986595:-|nuORF	ENST00000398117.1_1_18:60986541-60986595:-|nuORF	ENST00000398117.1_1_18:60986541-60986595:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	623.87109375	2	623.34552	1244.67649	-0.26581	-0.00016569	-4.1094	-0.0025616	-4.3753	-0.0027273	623.3427636427807	104.75	1.0887	104.73	104.37	105.46	-0.014809					54	25	3	0	0	0	0.17502	1	11293	11293		22.58	0	1	199980			30773	11176	20341	20351	35157	35157					0.06393641740328349
LLIGDSIRHKK	11	Unmodified	_LLIGDSIRHKK_					0	0	0			REV__nc|ENSG00000104044|Q04671-3|OCA2	REV__nc|ENSG00000104044|Q04671-3|OCA2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	427.302978515625	3	427.266345	1278.7772	-1.5274	-0.00065261	-2.5275	-0.0010799	-4.0549	-0.0017325	427.2654248030414	64.317	0.12885	64.317	64.238	64.367	0					8	6	2	0	0	0	0.17784	1	5648	5648		17.167	5.2344	1	28992	+		30774	15614	20342	20352	35158	35158					0.14896718513841734
LLIGGYGSPGW	11	Unmodified	_LLIGGYGSPGW_					0	0	0			REV__ENSG00000142619|ENST00000375460|PADI3	REV__ENSG00000142619|ENST00000375460|PADI3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402099609375	2	560.295299	1118.57605	-1.4186	-0.00079485	2.7927	0.0015647	1.374	0.00076987	560.2966659176706	102.34	0.27473	102.47	102.37	102.65	0.13569					17	6	3	0	0	0	0.1753	1	10735	10735		35.618	0	1	192170	+		30775	19748	20343	20353	35159	35159					0.02150029477343196
LLIGLDYIR	9	Unmodified	_LLIGLDYIR_					0	0	0		ENST00000503171.5_1_4:106317436-106374979:-|nuORF	ENST00000503171.5_1_4:106317436-106374979:-|nuORF	ENST00000503171.5_1_4:106317436-106374979:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3265991210938	2	538.329142	1074.64373	-1.4901	-0.00080219	-2.8806	-0.0015507	-4.3708	-0.0023529	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.69914	1	10603	10603		40.573	8.6178	1	93615000			30776	12876	20344	20354	35160	35160					0.1093947940810267
LLIGLDYIR	9	Unmodified	_LLIGLDYIR_					0	0	0		ENST00000503171.5_1_4:106317436-106374979:-|nuORF	ENST00000503171.5_1_4:106317436-106374979:-|nuORF	ENST00000503171.5_1_4:106317436-106374979:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3270874023438	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.72402	2	12129	12129;12405		38.806	14.287	1	4041000			30777	12876	20344	20354	35161;35162	35161					0.1093947940810267
LLIGLSWW	8	Unmodified	_LLIGLSWW_					0	0	0			REV__ENSG00000162302|ENST00000334205|RPS6KA4	REV__ENSG00000162302|ENST00000334205|RPS6KA4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3009338378906	2	494.286746	986.558939	-0.67327	-0.00033279	-3.5678	-0.0017635	-4.2411	-0.0020963	494.28502736285367	97.132	0.34062	97.18	96.87	97.211	0.048157					17	7	3	0	0	0	0.4196	1	10330	10330		21.702	0	1	201560	+		30778	20803	20345	20355	35163	35163					0.06512153662174569
LLIGPEVD	8	Unmodified	_LLIGPEVD_					0	0	0			REV__ENSG00000140443|ENST00000650285|IGF1R	REV__ENSG00000140443|ENST00000650285|IGF1R	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2613525390625	2	428.244744	854.474934	-0.17883	-7.6581E-05	3.224	0.0013807	3.0452	0.0013041	428.2462459147133	90.913	0.38844	90.982	90.884	91.272	0.069328					17	9	2	0	0	0	0.4196	1	9363	9363		20.482	1.1219	1	419440	+		30779	19615	20346	20356	35164	35164					0.041875777746213316
LLIGPEVD	8	Unmodified	_LLIGPEVD_					0	0	0			REV__ENSG00000140443|ENST00000650285|IGF1R	REV__ENSG00000140443|ENST00000650285|IGF1R	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2616271972656	2	428.244744	854.474934	-1.667	-0.0007139	3.2961	0.0014115	1.6291	0.00069764	428.2459827777188	90.668	0.47577	90.886	90.468	90.944	0.21736					14	11	2	0	0	0	0.4196	1	9088	9088		28.254	7.7724	1	326710	+		30780	19615	20346	20356	35165	35165					0.041875777746213316
LLIGSERR	8	Unmodified	_LLIGSERR_					0	0	0			REV__chr19:49360081-49362333|55|19.82|0.95|4.38|-|2|TEAD2,TEAD2|1	REV__chr19:49360081-49362333|55|19.82|0.95|4.38|-|2|TEAD2,TEAD2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28765869140625	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.86288	1	10126	10126		26.796	0.10319	1	48574000	+		30781	15716	20347	20357	35166	35166					0.0874858239999412
LLIGSERR	8	Unmodified	_LLIGSERR_					0	0	0			REV__chr19:49360081-49362333|55|19.82|0.95|4.38|-|2|TEAD2,TEAD2|1	REV__chr19:49360081-49362333|55|19.82|0.95|4.38|-|2|TEAD2,TEAD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2875671386719	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.86288	1	9796	9796		26.796	0	1	50946000	+		30782	15716	20347	20357	35167	35167					0.0874858239999412
LLIGSKQFGL	10	Unmodified	_LLIGSKQFGL_					0	0	0		ENSG00000196569|ENST00000421865|LAMA2	ENSG00000196569|ENST00000421865|LAMA2	ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.326904296875	2	538.329142	1074.64373	-0.15636	-8.4174E-05	-4.0212	-0.0021647	-4.1776	-0.0022489	538.3269075153179	101.16	2.8222	101.19	100.44	103.26	0.031036					310	67	7	0	0	0	0.8608	1	11017	11017		34.173	6.2903	1	74691000			30783	8075	20348	20358	35168	35168					0.10939479408125408
LLIGSKQFGL	10	Unmodified	_LLIGSKQFGL_					0	0	0		ENSG00000196569|ENST00000421865|LAMA2	ENSG00000196569|ENST00000421865|LAMA2	ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3264770507812	2	538.329142	1074.64373	-0.15628	-8.4129E-05	-3.1712	-0.0017072	-3.3275	-0.0017913	538.3273734998361	103.57	1.2288	103.57	103.11	104.34	-0.0016403					90	29	4	0	0	0	0.86763	1	11136	11136		26.693	1.1189	1	1025700			30784	8075	20348	20358	35169	35169					0.10939479408125408
LLIGSVTLCL	10	Unmodified	_LLIGSVTLCL_					0	0	0		ENST00000340308.7_1_7:140034602-140034719:-|nuORF	ENST00000340308.7_1_7:140034602-140034719:-|nuORF	ENST00000340308.7_1_7:140034602-140034719:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3129272460938	2	516.312103	1030.60965	-0.68072	-0.00035146	4.0405	0.0020861	3.3597	0.0017347	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.81018	1	10359	10359		38.806	8.3025	1	39641000			30785	10230	20349	20359	35170	35170					0.09557314924882121
LLIGSVTLCL	10	Unmodified	_LLIGSVTLCL_					0	0	0		ENST00000340308.7_1_7:140034602-140034719:-|nuORF	ENST00000340308.7_1_7:140034602-140034719:-|nuORF	ENST00000340308.7_1_7:140034602-140034719:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.31396484375	2	516.312103	1030.60965	1.9037	0.0009829	1.7854	0.00092181	3.6891	0.0019047	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.85934	1	11908	11908		35.618	3.6634	1	22616000			30786	10230	20349	20359	35171	35171					0.09557314924882121
LLIGTDSH	8	Unmodified	_LLIGTDSH_					0	0	0		ENSG00000100412|ENST00000216254|ACO2;ENST00000478010.1_1_22:41904038-41912046:+|nuORF	ENSG00000100412|ENST00000216254|ACO2	ENSG00000100412|ENST00000216254|ACO2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2615051269531	2	428.232168	854.449782	-1.0208	-0.00043714	4.3245	0.0018519	3.3036	0.0014147	428.2341933082593	90.57	0.67022	91.041	90.894	91.564	0.47068					27	16	3	0	0	0	0.4196	1	10761	10761		28.254	0	1	146270			30787	1838	20350	20360	35172	35172					0.016735229720438838
LLIGVRSKY	9	Unmodified	_LLIGVRSKY_					0	0	0		ENSG00000131459|ENST00000253778|GFPT2	ENSG00000131459|ENST00000253778|GFPT2	ENSG00000131459|ENST00000253778|GFPT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8272094726562	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.78536	1	10410	10410		29.15	3.5755	1	15330000			30788	3733	20351	20361	35173	35173					0.12214899127980061
LLIHITLII	9	Unmodified	_LLIHITLII_					0	0	0			REV__ENST00000494066.1_1_9:77676466-77684110:-|nuORF	REV__ENST00000494066.1_1_9:77676466-77684110:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8267211914062	2	524.860078	1047.7056	0.81116	0.00042575	0.73744	0.00038705	1.5486	0.0008128	524.8603648075419	99.139	0.41084	99.296	98.903	99.314	0.15659					12	9	2	0	0	0	0.20789	1	10316	10316		26.796	0	1	127790	+		30789	27709	20352	20362	35174	35174					0.18365830827292484
LLIHVHPA	8	Unmodified	_LLIHVHPA_					0	0	0			REV__ENSG00000181963|ENST00000325719|OR52K2	REV__ENSG00000181963|ENST00000325719|OR52K2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2739562988281	2	450.276712	898.538872	-1.7762	-0.00079979	-2.6214	-0.0011804	-4.3976	-0.0019801	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.80127	1	12192	12192		16.705	1.0632	1	2494900	+		30790	22491	20353	20363	35175	35175					0.08554402722222676
LLIICKKF	8	Unmodified	_LLIICKKF_					0	0	0		nc|nan|Q9HD87|C6orf50	nc|nan|Q9HD87|C6orf50	nc|nan|Q9HD87|C6orf50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.31390380859375	2	489.314449	976.614345	0.74244	0.00036329	-1.5302	-0.00074874	-0.78774	-0.00038545	489.31357671655405	95.118	2.0089	95.281	94.826	96.835	0.16308					112	47	4	0	0	0	0.85787	1	9773	9773		9.4706	0.64823	1	1396400			30791	15376	20354	20364	35176	35176					0.1251024385829851
LLIIETAGF	9	Unmodified	_LLIIETAGF_					0	0	0			REV__ENSG00000221954|ENST00000335238|OR4C12	REV__ENSG00000221954|ENST00000335238|OR4C12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7899475097656	2	488.789318	975.564084	1.4412	0.00070445	-1.6239	-0.00079376	-0.18272	-8.931E-05	488.78836786844454	102.14	0.87674	102.4	102.03	102.91	0.26323					61	21	5	0	0	0	0.77546	1	12448	12448		31.955	1.4512	1	1967000	+		30792	23718	20355	20365	35177	35177					0.07532412734133231
LLIKKLPPVL	10	Unmodified	_LLIKKLPPVL_					0	0	0		ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X	ENSG00000124486|ENST00000378308|USP9X	ENSG00000124486|ENST00000378308|USP9X	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.329833984375	2	567.404653	1132.79475	-1.3956	-0.00079185	3.9262	0.0022277	2.5306	0.0014359	567.40697268865	92.434	0.25541	92.62	92.386	92.642	0.18582					6	5	2	0	0	0	0.37624	1	9285	9285		3.1592	2.1623	1	19753			30793	3334	20356	20366	35178	35178					0.23366665786784324
LLIKKYENV	9	Unmodified	_LLIKKYENV_					0	0	0			REV__ENST00000491210.1_1_1:158811943-158812264:+|nuORF	REV__ENST00000491210.1_1_1:158811943-158812264:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.340576171875	2	560.342249	1118.66995	1.3861	0.00077669	-4.4809	-0.0025108	-3.0948	-0.0017342	560.3396736903244	107.12	0.97542	107.15	106.67	107.65	0.035614					55	22	3	0	0	0	0.74721	1	11720	11720		37.159	2.9866	1	800860	+		30794	20935	20357	20367	35179	35179					0.11535748579603933
LLIKKYENV	9	Unmodified	_LLIKKYENV_					0	0	0			REV__ENST00000491210.1_1_1:158811943-158812264:+|nuORF	REV__ENST00000491210.1_1_1:158811943-158812264:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3403930664062	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	1	12842	12842		21.96	1.9631	1	4071000	+		30795	20935	20357	20367	35180	35180					0.11535748579603933
LLIKPGTP	8	Unmodified	_LLIKPGTP_					0	0	0			REV__ENST00000263736.4_1_2:45645594-45645675:-|nuORF	REV__ENST00000263736.4_1_2:45645594-45645675:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7749328613281	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.884	1	2916	2916		33.516	0	1	10440000	+		30796	24456	20358	20368	35181	35181					0.10712464770847419
LLIKPGTP	8	Unmodified	_LLIKPGTP_					0	0	0			REV__ENST00000263736.4_1_2:45645594-45645675:-|nuORF	REV__ENST00000263736.4_1_2:45645594-45645675:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7745056152344	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.89962	1	2760	2760		38.806	8.9646	1	9723800	+		30797	24456	20358	20368	35182	35182					0.10712464770847419
LLIKPHQRITK	11	Unmodified	_LLIKPHQRITK_					0	0	0		nc|ENSG00000008323|Q3KR16-2|PLEKHG6;ENSG00000008323|ENST00000684764|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.28173828125	3	449.625873	1345.85579	-0.14156	-6.365E-05	-4.0932	-0.0018404	-4.2348	-0.0019041	449.6240133062568	107.37	0.79652	107.34	106.95	107.75	-0.034409					51	18	3	0	0	0	0.1745	1	11731	11731		12.957	0	1	253070			30798	743	20359	20369	35183	35183					0.1966957081892815
LLIKPHQRITK	11	Unmodified	_LLIKPHQRITK_					0	0	0		nc|ENSG00000008323|Q3KR16-2|PLEKHG6;ENSG00000008323|ENST00000684764|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	449.625873	1345.85579	-0.96156	-0.00043234	-3.3676	-0.0015142	-4.3292	-0.0019465	449.6241880976844	107.66	0.28912	107.66	107.44	107.73	0	0.36468	0.0020769	NaN	12.957	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137560			30799	743	20359	20369							0.1966957081892815
LLIKPHQRITK	11	Unmodified	_LLIKPHQRITK_					0	0	0		nc|ENSG00000008323|Q3KR16-2|PLEKHG6;ENSG00000008323|ENST00000684764|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	449.625873	1345.85579	2.753	0.0012378	-7.0086	-0.0031513	-4.2556	-0.0019134	449.6226490461692	107.29	1.0617	107.25	106.7	107.77	-0.034134	-0.043311	-0.0028344	NaN	12.957	63	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	376920			30800	743	20359	20369							0.1966957081892815
LLIKPHQRITK	11	Unmodified	_LLIKPHQRITK_					0	0	0		nc|ENSG00000008323|Q3KR16-2|PLEKHG6;ENSG00000008323|ENST00000684764|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	449.625873	1345.85579	1.3655	0.00061395	-5.5934	-0.002515	-4.228	-0.001901	449.62326166970286	107.13	0.92941	107.17	106.81	107.74	0.035622	-0.13129	-0.00092548	NaN	12.957	57	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	400160			30801	743	20359	20369							0.1966957081892815
LLIKPHQRITK	11	Unmodified	_LLIKPHQRITK_					0	0	0		nc|ENSG00000008323|Q3KR16-2|PLEKHG6;ENSG00000008323|ENST00000684764|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	449.625873	1345.85579	-1.2481	-0.00056116	-3.1356	-0.0014099	-4.3837	-0.001971	449.6243961204514	107.01	1.3927	107.14	106.46	107.86	0.13866	-0.15315	0.0023898	NaN	12.957	78	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	637050			30802	743	20359	20369							0.1966957081892815
LLIKPHQRITK	11	Unmodified	_LLIKPHQRITK_					0	0	0		nc|ENSG00000008323|Q3KR16-2|PLEKHG6;ENSG00000008323|ENST00000684764|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	449.625873	1345.85579	0.75296	0.00033855	-4.9592	-0.0022298	-4.2063	-0.0018913	449.6235440063632	107.16	1.158	107.25	106.64	107.8	0.091255	-0.045608	-7.0021E-05	NaN	12.957	95	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1109800			30803	743	20359	20369							0.1966957081892815
LLIKPHQRITK	11	Unmodified	_LLIKPHQRITK_					0	0	0		nc|ENSG00000008323|Q3KR16-2|PLEKHG6;ENSG00000008323|ENST00000684764|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	449.625873	1345.85579	-1.7783	-0.00079955	-2.142	-0.00096311	-3.9203	-0.0017627	449.62485576948245	107.23	0.99026	107.27	106.72	107.71	0.036125	-0.029624	0.0037301	NaN	12.957	52	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	409470			30804	743	20359	20369							0.1966957081892815
LLIKSKELQDS	11	Unmodified	_LLIKSKELQDS_					0	0	0		nc|ENSG00000122966|O14578-2|CIT;nc|ENSG00000122966|O14578|CIT;ENSG00000122966|ENST00000392521|CIT;ENST00000545913.5_1_12:120222673-120241095:-|nuORF;ENST00000488203.1_1_12:120221699-120241095:-|nuORF	nc|ENSG00000122966|O14578-2|CIT	nc|ENSG00000122966|O14578-2|CIT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.3689575195312	2	637.371735	1272.72892	1.5361	0.00097909	-3.4409	-0.0021931	-1.9048	-0.001214	637.3694440717433	105.45	2.1927	105.61	104.92	107.11	0.15924					169	54	4	0	0	0	0.69248	1	11211	11211		32.751	4.669	1	2533600			30805	3256	20360	20370	35184	35184					0.10346180083274703
LLILALPLL	9	Unmodified	_LLILALPLL_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.85028076171875	2	489.851722	977.68889	0.56048	0.00027455	-3.3092	-0.001621	-2.7487	-0.0013465	489.8499435094206	74.939	0.71374	75.071	74.863	75.577	0.13207					33	19	2	0	0	0	0.72098	1	6953	6953		39.021	9.18	1	142460	+		30806	27400	20361	20371	35185	35185					0.19915329941329674
LLILALPLL	9	Unmodified	_LLILALPLL_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	489.851722	977.68889	-1.173	-0.00057458	-1.5979	-0.00078271	-2.7708	-0.0013573	489.85080691432006	75.584	0.66766	75.584	75.29	75.958	0	0.34058	0.00042735	NaN	39.021	42	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105960	+		30807	27400	20361	20371							0.19915329941329674
LLILALPLL	9	Unmodified	_LLILALPLL_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	489.851722	977.68889	-1.9466	-0.00095355	-0.91381	-0.00044763	-2.8604	-0.0014012	489.851143534177	75.085	0.78783	75.13	74.842	75.63	0.04509	-0.11355	0.0010975	NaN	39.021	33	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116340	+		30808	27400	20361	20371							0.19915329941329674
LLILAMTVTD	10	Unmodified	_LLILAMTVTD_					0	0	0			REV__ENSG00000187527|ENST00000342358|ATP13A5	REV__ENSG00000187527|ENST00000342358|ATP13A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3200073242188	2	545.314843	1088.61513	0.15103	8.2357E-05	3.0947	0.0016876	3.2457	0.0017699	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.86718	1	8545	8545		27.882	2.3082	1	5755000	+		30809	22920	20362	20372	35186	35186					0.07436993716692086
LLILGLMAM	9	Unmodified	_LLILGLMAM_					0	0	0			REV__nc|ENSG00000042781|O75445-3|USH2A	REV__nc|ENSG00000042781|O75445-3|USH2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7907409667969	2	487.792492	973.570431	-1.5393	-0.00075085	-2.322	-0.0011326	-3.8612	-0.0018835	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.78292	1	8127	8127		29.842	0.69198	1	1760400	+		30810	16330	20363	20373	35187	35187					0.0825889136965543
LLILIFRSLAA	11	Unmodified	_LLILIFRSLAA_					0	0	0		ENST00000524332.1_1_8:91054932-91064122:+|nuORF	ENST00000524332.1_1_8:91054932-91064122:+|nuORF	ENST00000524332.1_1_8:91054932-91064122:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.400390625	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.33	1	72.41	71.91	72.91	0.080032								0	0	0	0.56276	1	6597	6597		24.519	5.4157	1				30811	13216	20364	20374	35188	35188					0.1854857629309663
LLILKRVLEM	10	Unmodified	_LLILKRVLEM_					0	0	0		ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.2923583984375	3	409.933427	1226.77845	1.6134	0.00066138	2.1656	0.00088776	3.779	0.0015491	409.93428113075254	20.519	0.54512	20.06	19.778	20.323	-0.4591					16	11	2	0	0	0	0.37624	1	636	636		17.468	9.2329	1	74493			30812	999	20365	20375	35189	35189					0.17413216558361455
LLILSRAM	8	Unmodified	_LLILSRAM_					0	0	0		ENSG00000168924|ENST00000302787|LETM1;ENST00000511977.1_1_4:1824675-1834605:-|nuORF	ENSG00000168924|ENST00000302787|LETM1	ENSG00000168924|ENST00000302787|LETM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.7877197265625	2	458.786056	915.557558	0.69326	0.00031806	2.4281	0.001114	3.1213	0.001432	458.78715906372344	92.966	2.4091	93.125	92.453	94.862	0.15874					174	57	5	0	0	0	0.91005	1	9538	9538		42.474	5.446	1	14401000			30813	6452	20366	20376	35190	35190					0.09640196301768356
LLIMFVSG	8	Unmodified	_LLIMFVSG_					0	0	0			REV__ENSG00000136213|ENST00000618655|CHST12	REV__ENSG00000136213|ENST00000618655|CHST12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2552490234375	2	440.254057	878.493561	-1.1281	-0.00049663	4.1962	0.0018474	3.0681	0.0013507	440.2557479543984	62.714	1.4312	63.102	62.273	63.704	0.3878					74	32	3	0	0	0	0.83466	1	6753	6753		23.037	0	1	707290	+		30814	19295	20367	20377	35191	35191					0.04945416144846604
LLIMGISK	8	Unmodified	_LLIMGISK_					0	0	0			REV__ENST00000521922.5_1_8:103274261-103276712:-|nuORF	REV__ENST00000521922.5_1_8:103274261-103276712:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2678527832031	2	437.775157	873.53576	1.1735	0.00051372	2.5858	0.001132	3.7593	0.0016457	437.77535261989465	50.72	0.44645	50.727	50.563	51.01	0.0077477					38	17	3	0	0	0	0.4196	1	4354	4354		14.664	1.7049	1	126010	+		30815	28126	20368	20378	35192	35192					0.09393391553226138
LLIPAASYV	9	Unmodified	_LLIPAASYV_					0	0	0		ENST00000475582.5_1_2:27589580-27589796:-|nuORF;nc|ENSG00000115211|Q9UI10-3|EIF2B4;ENSG00000115211|ENST00000347454|EIF2B4;nc|ENSG00000115211|Q9UI10-2|EIF2B4	ENST00000475582.5_1_2:27589580-27589796:-|nuORF	ENST00000475582.5_1_2:27589580-27589796:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.78179931640625	2	473.784036	945.553519	-0.30014	-0.0001422	-2.0846	-0.00098766	-2.3848	-0.0011299	473.7828602657225	21.786	0.75253	21.722	21.433	22.185	-0.063837					49	24	3	0	0	0	0.77546	1	682	682		31.955	1.4512	1	95857			30816	2818	20369	20379	35193	35193					0.07856430079709753
LLIPELGACV	10	Unmodified	_LLIPELGACV_					0	0	0		ENSG00000167646|ENST00000524407|DNAAF3;nc|ENSG00000167646|Q8N9W5-6|DNAAF3;nc|ENSG00000167646|Q8N9W5-3|DNAAF3;ENST00000587789.2_1_19:55670432-55671308:-|nuORF;nc|ENSG00000167646|Q8N9W5-7|DNAAF3	ENSG00000167646|ENST00000524407|DNAAF3	ENSG00000167646|ENST00000524407|DNAAF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.2979736328125	2	514.296453	1026.57835	2.4088	0.0012388	0.72442	0.00037257	3.1332	0.0016114	514.2969979769872	96.495	1.923	96.438	95.348	97.271	-0.056389					101	44	3	0	0	0	0.86589	1	10346	10346		29.15	1.2673	1	635860			30817	6312	20370	20380	35194	35194					0.06612741890762663
LLIPLELLLSK	11	Unmodified	_LLIPLELLLSK_					0	0	0			REV__nc|ENSG00000171053|Q8WXA2-2|PATE1	REV__nc|ENSG00000171053|Q8WXA2-2|PATE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3792724609375	2	626.417957	1250.82136	2.9108	0.0018234	-1.7458	-0.0010936	1.165	0.00072978	626.4164817442158	106.07	0.28586	106.03	105.9	106.18	-0.03714					8	6	2	0	0	0	0.17835	1	11720	11720		18.262	0	1	109660	+		30818	21708	20371	20381	35195	35195					0.20598309887463984
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__nc|ENSG00000167302|Q96N21|TEPSIN	REV__nc|ENSG00000167302|Q96N21|TEPSIN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.8658447265625	2	561.363319	1120.71209	-1.2272	-0.00068889	2.0811	0.0011683	0.85392	0.00047936	561.3643862619919	45.972	0.98896	45.972	45.502	46.491	0					58	25	3	0	0	0	0.78851	1	3401	3401		28.254	4.0515	1	208060	+		30819	21374	20372	20382	35196	35196					0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__nc|ENSG00000167302|Q96N21|TEPSIN	REV__nc|ENSG00000167302|Q96N21|TEPSIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3623046875	2	561.363319	1120.71209	-1.1522	-0.00064679	0.74579	0.00041866	-0.40638	-0.00022813	561.3636203796618	43.91	1.2503	44.684	44.223	45.473	0.7738					84	30	4	0	0	0	0.7932	1	4041	4041		18.324	4.1873	1	1618600	+		30820	21374	20372	20382	35197	35197					0.15655768778628953
LLIPSQVRAL	10	Unmodified	_LLIPSQVRAL_					0	0	0		nc|ENSG00000204410|O43196-4|MSH5;nc|ENSG00000204410|O43196-3|MSH5	nc|ENSG00000204410|O43196-4|MSH5	nc|ENSG00000204410|O43196-4|MSH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.353515625	2	555.355691	1108.69683	-0.86355	-0.00047958	-3.4797	-0.0019325	-4.3433	-0.0024121	555.3536421650435	101.16	2.3681	101.19	100.7	103.07	0.031036					166	56	5	0	0	0	0.86589	1	10840	10840		29.15	1.2673	1	6361400			30821	15210	20373	20383	35198	35198					0.14682857190791765
LLIPYFLLFSK	11	Unmodified	_LLIPYFLLFSK_					0	0	0		ENSG00000184210|ENST00000333026|DGAT2L6	ENSG00000184210|ENST00000333026|DGAT2L6	ENSG00000184210|ENST00000333026|DGAT2L6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9429016113281	3	451.944209	1352.8108	-0.67633	-0.00030566	-1.5611	-0.00070551	-2.2374	-0.0010112	451.94335598806316	53.501	2.9355	53.476	51.367	54.303	-0.024754					205	72	4	0	0	0	0.78351	1	4791	4791		14.779	1.2709	1	765750			30822	7591	20374	20384	35199	35199					0.14850327233034477
LLIQMHLK	8	Unmodified	_LLIQMHLK_					0	0	0			REV__ENST00000396418.6_1_8:79510623-79510731:+|nuORF	REV__ENST00000396418.6_1_8:79510623-79510731:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.3067321777344	2	498.307155	994.599758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.774	1	52.792	52.292	53.292	0.017487								0	0	0	0.30125	1	4616	4616		20.482	1.1219	1		+		30823	26142	20375	20385	35200	35200					0.10224171710149221
LLIQPMALAVR	11	Unmodified	_LLIQPMALAVR_					0	0	0		ENSG00000198899|ENST00000361899|MT-ATP6	ENSG00000198899|ENST00000361899|MT-ATP6	ENSG00000198899|ENST00000361899|MT-ATP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.9222717285156	3	408.921409	1223.7424	3.1807	0.0013007	-1.0639	-0.00043504	2.1168	0.00086562	408.92095568616344	104.57	4.1233	104.61	103.07	107.19	0.039856					288	98	5	0	0	0	0.6921	1	11455	11455		35.178	16.647	1	4230400			30824	8362	20376	20386	35201	35201					0.13947759381517244
LLIQSLFAFL	10	Unmodified	_LLIQSLFAFL_					0	0	0		nc|ENSG00000103044|O00219-2|HAS3;ENSG00000103044|ENST00000569188|HAS3	nc|ENSG00000103044|O00219-2|HAS3	nc|ENSG00000103044|O00219-2|HAS3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8558349609375	2	582.854993	1163.69543	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.36	1	115.39	114.89	115.89	0.026466								0	0	0	0.45132	1	12653	12653		24.519	0	1				30825	2047	20377	20387	35202	35202					0.12013223102030679
LLIRHGSNR	9	Unmodified	_LLIRHGSNR_					0	0	0			REV__ENST00000478232.1_1_1:28862693-28863283:+|nuORF	REV__ENST00000478232.1_1_1:28862693-28863283:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.68359375	2	533.317432	1064.62031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.64	1	66.692	66.192	67.192	0.052368								0	0	0	0.29475	1	5909	5909		32.812	2.3088	1		+		30826	27375	20378	20388	35203	35203					0.09058478414181081
LLIRRNGRLS	10	Unmodified	_LLIRRNGRLS_					0	0	0			REV__ENST00000374994.8_2_9:101911597-101911711:+|nuORF	REV__ENST00000374994.8_2_9:101911597-101911711:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.380126953125	2	599.380563	1196.74657	0.97491	0.00058434	-1.8328	-0.0010985	-0.85787	-0.00051419	599.3792959797308	103.23	2.9032	103.41	102.97	105.87	0.18297					219	73	5	0	0	0	0.86718	1	10969	10969		27.882	3.3631	1	22539000	+		30827	25804	20379	20389	35204	35204					0.15606984919463684
LLISADRR	8	Unmodified	_LLISADRR_					0	0	0		ENSG00000204618|ENST00000244360|RNF39;nc|ENSG00000204618|Q9H2S5-2|RNF39;nc|ENSG00000204618|Q9H2S5|RNF39	ENSG00000204618|ENST00000244360|RNF39	ENSG00000204618|ENST00000244360|RNF39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.287841796875	2	472.287808	942.561064	0.76193	0.00035985	-0.26462	-0.00012498	0.49731	0.00023487	472.28771256093336	99.111	1.7073	99.267	98.769	100.48	0.15659					91	39	3	0	0	0	0.87479	1	10311	10311		30.504	0	1	525470			30828	8469	20380	20390	35205	35205					0.0874858239999412
LLISADRR	8	Unmodified	_LLISADRR_					0	0	0		ENSG00000204618|ENST00000244360|RNF39;nc|ENSG00000204618|Q9H2S5-2|RNF39;nc|ENSG00000204618|Q9H2S5|RNF39	ENSG00000204618|ENST00000244360|RNF39	ENSG00000204618|ENST00000244360|RNF39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.28778076171875	2	472.287808	942.561064	1.4182	0.00066978	-1.3444	-0.00063493	0.07378	3.4846E-05	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.884	1	11538	11538		33.516	0	1	21289000			30829	8469	20380	20390	35206	35206					0.0874858239999412
LLISFGGV	8	Unmodified	_LLISFGGV_					0	0	0			REV__ENSG00000075673|ENST00000381946|ATP12A	REV__ENSG00000075673|ENST00000381946|ATP12A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.4206237792969	2	403.244547	804.47454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.121	1	22.169	21.669	22.669	0.048553								0	0	0	0.29871	1	638	638		23.037	1.0768	1		+		30830	16716	20381	20391	35207	35207					0.06448202845444939
LLISHVIFN	9	Unmodified	_LLISHVIFN_					0	0	0		ENST00000310653.10_2_11:73388880-73388949:-|nuORF	ENST00000310653.10_2_11:73388880-73388949:-|nuORF	ENST00000310653.10_2_11:73388880-73388949:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.3135375976562	2	528.316035	1054.61752	-0.035772	-1.8899E-05	-3.4565	-0.0018261	-3.4923	-0.001845	528.3142278244472	98.548	1.1039	98.598	98.087	99.191	0.04982					64	24	4	0	0	0	0.76255	1	10440	10440		35.618	0	1	426950			30831	9908	20382	20392	35208	35208					0.09239210236660256
LLISHVRSA	9	Unmodified	_LLISHVRSA_					0	0	0			REV__chr5:64724573-64726451|19|81.16|0.01|13.41|-|0|TE_info:AluY,AluY_dup30343,Alu,SINE,donor,+,64726451,64726597|SREK1IP1,None|2	REV__chr5:64724573-64726451|19|81.16|0.01|13.41|-|0|TE_info:AluY,AluY_dup30343,Alu,SINE,donor,+,64726451,64726597|SREK1IP1,None|2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.30596923828125	2	498.303458	994.592364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.027	1	53.098	52.598	53.598	0.070713								0	0	0	0.30778	1	4309	4309		27.882	0	1		+		30832	15858	20383	20393	35209	35209					0.0948515543409485
LLISLSYLVL	10	Unmodified	_LLISLSYLVL_					0	0	0		ENST00000530958.5_1_11:108094184-108094271:+|nuORF	ENST00000530958.5_1_11:108094184-108094271:+|nuORF	ENST00000530958.5_1_11:108094184-108094271:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3634033203125	2	567.36265	1132.71075	-0.82344	-0.00046719	2.4008	0.0013621	1.5773	0.00089493	567.3638410249442	44.579	2.1787	44.545	43.955	46.134	-0.03347					156	50	5	0	0	0	0.85939	1	3611	3611		23.042	0	1	2613600			30833	13351	20384	20394	35210	35210					0.1497008989922506
LLISRLLLRVT	11	Unmodified	_LLISRLLLRVT_					0	0	0		ENST00000265271.6_1_5:145640420-145641106:+|nuORF	ENST00000265271.6_1_5:145640420-145641106:+|nuORF	ENST00000265271.6_1_5:145640420-145641106:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3930053710938	2	648.939922	1295.86529	1.8779	0.0012186	-2.1879	-0.0014198	-0.31003	-0.00020119	648.9387303157619	107.18	0.11508	107.21	107.15	107.26	0.035622					4	2	2	0	0	0	0.17806	1	11760	11760		5.9211	0	1	125330			30834	9501	20385	20395	35211	35211					0.2291933910444186
LLISVRRP	8	Unmodified	_LLISVRRP_					0	0	0			REV__ENSG00000165392|ENST00000298139|WRN	REV__ENSG00000165392|ENST00000298139|WRN	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.3176574707031	2	477.316369	952.618185	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.988	1	68.373	67.873	68.873	0.38482								0	0	0	0.29498	1	7458	7458		26.796	0	1		+		30835	21180	20386	20396	35212	35212					0.13998049676376922
LLITGIVGAM	10	Unmodified	_LLITGIVGAM_					0	0	0			REV__nc|ENSG00000170180|P02724-3|GYPA	REV__nc|ENSG00000170180|P02724-3|GYPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3005676269531	2	494.298996	986.583439	0.76681	0.00037903	2.7292	0.001349	3.496	0.0017281	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.86201	1	10261	10261		24.203	1.1603	1	52135000	+		30836	21633	20387	20397	35213	35213					0.08961045753392227
LLITRVNQTPN	11	Unmodified	_LLITRVNQTPN_					0	0	0			REV__ENSG00000099804|ENST00000215574|CDC34	REV__ENSG00000099804|ENST00000215574|CDC34	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.892822265625	2	634.869694	1267.72483	1.4994	0.00095193	-1.4908	-0.00094647	0.008611	5.4668E-06	635.3708540762951	105.33	0.5255	105.49	105.17	105.69	0.15924					29	13	3	0	0	0	0.16519	1	11178	11178		43.651	0	1	377620	+		30837	17104	20388	20398	35214	35214					0.10168135380240528
LLITRVNQTPN	11	Unmodified	_LLITRVNQTPN_					0	0	0			REV__ENSG00000099804|ENST00000215574|CDC34	REV__ENSG00000099804|ENST00000215574|CDC34	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8928833007812	2	634.869694	1267.72483	0.93382	0.00059285	-1.6053	-0.0010192	-0.67151	-0.00042632	634.8696543250692	105.68	0.42295	105.79	105.66	106.08	0.10766					13	10	2	0	0	0	0.15701	1	11297	11297		63.534	13.998	1	512460	+		30838	17104	20388	20398	35215	35215					0.10168135380240528
LLITRVNQTPN	11	Unmodified	_LLITRVNQTPN_					0	0	0			REV__ENSG00000099804|ENST00000215574|CDC34	REV__ENSG00000099804|ENST00000215574|CDC34	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8934326171875	2	634.869694	1267.72483	-1.1756	-0.00074633	1.5917	0.0010105	0.41612	0.00026418	635.3724841831554	106.16	0.55916	106.21	105.78	106.34	0.053757					19	13	2	0	0	0	0.17553	1	11272	11272		51.528	11.47	1	333200	+		30839	17104	20388	20398	35216	35216					0.10168135380240528
LLITSLGHIKL	11	Unmodified	_LLITSLGHIKL_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.366455078125	2	604.392273	1206.76999	3.582	0.0021649	-0.95116	-0.00057487	2.6308	0.00159	604.3918336860837	104.43	0.37215	104.66	104.43	104.8	0.22681					10	8	2	0	0	0	0.17385	1	12728	12728		25.574	8.2091	1	69148			30840	1754	20389	20399	35217	35217					0.1748798591340801
LLITTLSIT	9	Unmodified	_LLITTLSIT_					0	0	0			REV__ENSG00000118322|ENST00000327245|ATP10B	REV__ENSG00000118322|ENST00000327245|ATP10B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.9585876464844	2	487.810251	973.605948	-0.67898	-0.00033121	-2.1953	-0.0010709	-2.8743	-0.0014021	487.80907702850294	102.35	0.56969	102.54	102.37	102.94	0.19484					22	13	2	0	0	0	0.20789	1	10815	10815		24.203	6.8378	1	123330	+		30841	18304	20390	20400	35218	35218					0.11808968422656108
LLITTLSIT	9	Unmodified	_LLITTLSIT_					0	0	0			REV__ENSG00000118322|ENST00000327245|ATP10B	REV__ENSG00000118322|ENST00000327245|ATP10B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	487.810251	973.605948	0.79054	0.00038564	-3.6524	-0.0017817	-2.8618	-0.001396	487.8084131851284	102.47	0.56438	102.61	102.34	102.9	0.13523	0.0026564	-0.0011597	NaN	24.203	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134670	+		30842	18304	20390	20400							0.11808968422656108
LLITTLSIT	9	Unmodified	_LLITTLSIT_					0	0	0			REV__ENSG00000118322|ENST00000327245|ATP10B	REV__ENSG00000118322|ENST00000327245|ATP10B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	487.810251	973.605948	-1.6547	-0.00080716	-0.97616	-0.00047618	-2.6308	-0.0012833	487.8094183601165	102.43	0.56634	102.56	102.37	102.94	0.13569	-0.041945	0.0014513	NaN	24.203	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84377	+		30843	18304	20390	20400							0.11808968422656108
LLITVLYGLGR	11	Unmodified	_LLITVLYGLGR_					0	0	0			REV__ENST00000570910.1_1_17:79649904-79650744:-|nuORF	REV__ENST00000570910.1_1_17:79649904-79650744:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2485656738281	3	406.592058	1216.75434	1.1407	0.00046379	-3.369	-0.0013698	-2.2283	-0.00090602	406.5912798505857	88.491	0.23325	88.417	88.319	88.552	-0.074005					8	5	2	0	0	0	0.1745	1	9190	9190		23.378	3.3474	1	79513	+		30844	28929	20391	20401	35219	35219					0.15463699396354968
LLIVGAVPS	9	Unmodified	_LLIVGAVPS_					0	0	0			REV__ENSG00000204301|ENST00000375023|NOTCH4	REV__ENSG00000204301|ENST00000375023|NOTCH4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77972412109375	2	434.778754	867.542954	-1.6369	-0.00071169	4.2666	0.001855	2.6297	0.0011433	434.7804825082367	43.238	1.5673	43.244	42.525	44.093	0.0057526					133	41	4	0	0	0	0.69914	1	2917	2917		40.573	0	1	2391100	+		30845	23479	20392	20402	35220	35220					0.10388447425293634
LLIVGAVPS	9	Unmodified	_LLIVGAVPS_					0	0	0			REV__ENSG00000204301|ENST00000375023|NOTCH4	REV__ENSG00000204301|ENST00000375023|NOTCH4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.780029296875	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.76996	1	3700	3700		33.516	0	1	2175000	+		30846	23479	20392	20402	35221	35221					0.10388447425293634
LLIVKEGG	8	Unmodified	_LLIVKEGG_					0	0	0			REV__nc|ENSG00000101194|Q9BYT1-3|SLC17A9	REV__nc|ENSG00000101194|Q9BYT1-3|SLC17A9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	414.76153564453125	2	414.763104	827.511654	-1.9066	-0.00079078	-1.3201	-0.00054751	-3.2266	-0.0013383	414.7625113918511	88.263	2.5091	88.432	87.911	90.42	0.16923					168	58	4	0	0	0	0.87276	1	8710	8710		29.842	1.5873	1	7346500	+		30847	17251	20393	20403	35222	35222					0.09099874391199592
LLIVLLSLPRS	11	Unmodified	_LLIVLLSLPRS_					0	0	0		ENST00000369155.3_1_1:149857423-149857570:-|nuORF	ENST00000369155.3_1_1:149857423-149857570:-|nuORF	ENST00000369155.3_1_1:149857423-149857570:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	409.2932434082031	3	408.607708	1222.80129	0.012695	5.1874E-06	-3.9338	-0.0016074	-3.9212	-0.0016022	408.6059670058306	18.872	0.5093	18.938	18.691	19.201	0.066298					32	24	2	0	0	0	0.17504	1	389	389		19.627	9.0401	1	76220			30848	10612	20394	20404	35223	35223					0.19880558947511418
LLIVLPTLIG	10	Unmodified	_LLIVLPTLIG_					0	0	0			REV__ENSG00000172940|ENST00000311856|SLC22A13	REV__ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.361083984375	2	526.359911	1050.70527	0.41493	0.0002184	1.9977	0.0010515	2.4127	0.0012699	526.3608149931753	33.292	1.7707	33.259	32.845	34.615	-0.032677					246	76	5	0	0	0	0.86201	1	1578	1578		24.203	0	1	5110100	+		30849	21870	20395	20405	35224	35224					0.1819441110740172
LLIVQVPS	8	Unmodified	_LLIVQVPS_					0	0	0			REV__nc|ENSG00000188807|Q5SNT2-2|TMEM201	REV__nc|ENSG00000188807|Q5SNT2-2|TMEM201	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7798767089844	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.884	1	3401	3401		33.516	0	1	2364100	+		30850	23032	20396	20406	35225	35225					0.10388447425293634
LLIVSATLCF	10	Unmodified	_LLIVSATLCF_					0	0	0		ENSG00000158683|ENST00000289672|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	ENSG00000158683|ENST00000289672|PKD1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.31298828125	2	540.312103	1078.60965	1.0096	0.00054552	-1.9615	-0.0010598	-0.95189	-0.00051432	540.3108265870129	17.184	0.38091	17.102	16.966	17.347	-0.0821					33	15	3	0	0	0	0.86452	1	219	219		30.504	1.3541	1	134770			30851	5492	20397	20407	35226	35226					0.07349314924863393
LLIVVPIV	8	Unmodified	_LLIVVPIV_					0	0	0			REV__nc|ENSG00000196376|Q5T1Q4-2|SLC35F1	REV__nc|ENSG00000196376|Q5T1Q4-2|SLC35F1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.2557373046875	2	433.30969	864.604826	0.73488	0.00031843	1.7192	0.00074493	2.454	0.0010634	433.3105506628584	107.17	0.34747	107.26	107.11	107.46	0.091255					14	8	2	0	0	0	0.4196	1	11488	11488		16.705	0	1	130750	+		30852	23121	20398	20408	35227	35227					0.1671079884442861
LLIWKLLITIH	11	Unmodified	_LLIWKLLITIH_					0	0	0		nc|ENSG00000259207|P05106-2|ITGB3;nc|ENSG00000259207|P05106-3|ITGB3;ENSG00000259207|ENST00000559488|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.9664001464844	3	454.967236	1361.87988	-1.2289	-0.00055911	0.35227	0.00016027	-0.87662	-0.00039883	454.9672058394649	41.291	1.22	41.25	40.922	42.142	-0.040806					93	31	4	0	0	0	0.80593	1	3094	3094		10.104	0.8921	1	820870			30853	8913	20399	20409	35228	35228					0.2134141125259248
LLIWNKNL	8	Unmodified	_LLIWNKNL_					0	0	0			REV__ENST00000251047.5_1_18:57005828-57005999:-|nuORF	REV__ENST00000251047.5_1_18:57005828-57005999:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.31121826171875	2	507.310752	1012.60695	-0.84598	-0.00042918	4.0907	0.0020752	3.2447	0.0016461	507.3126659321578	61.664	1.1042	62.052	61.561	62.665	0.38845					78	25	4	0	0	0	0.73619	1	6616	6616		65.897	7.1155	1	1934900	+		30854	24285	20400	20410	35229	35229					0.10115227582218722
LLIWPVLRRSV	11	Unmodified	_LLIWPVLRRSV_					0	0	0		ENST00000380588.4_1_21:41163939-41173276:+|nuORF	ENST00000380588.4_1_21:41163939-41173276:+|nuORF	ENST00000380588.4_1_21:41163939-41173276:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.225341796875	3	451.290602	1350.84998	0.53388	0.00024094	-3.8382	-0.0017321	-3.3043	-0.0014912	451.28878640639516	31.267	0.90745	31.256	30.811	31.719	-0.010656					46	21	3	0	0	0	0.1767	1	1747	1747		13.508	0	1	29359			30855	10923	20401	20411	35230	35230					0.18858472307260854
LLIYFLRGVSA	11	Unmodified	_LLIYFLRGVSA_					0	0	0		ENST00000493442.1_1_X:103420410-103430858:+|nuORF	ENST00000493442.1_1_X:103420410-103430858:+|nuORF	ENST00000493442.1_1_X:103420410-103430858:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.92242431640625	3	417.920174	1250.73869	4.0685	0.0017003	0.88889	0.00037149	4.9574	0.0020718	417.9204504044182	105.51	2.6111	105.69	104.89	107.5	0.18647					199	86	4	0	0	0	0.76322	1	12843	12843		17.167	4.7339	1	601650			30856	12726	20402	20412	35231	35231					0.12335412879338037
LLIYIRNIHP	10	Unmodified	_LLIYIRNIHP_					0	0	0			REV__L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|86|2|sense	REV__L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|86|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.9222412109375	3	417.923919	1250.74993	-1.7716	-0.00074038	-2.0493	-0.00085646	-3.8209	-0.0015968	417.92308931399344	105.49	2.9586	105.65	104.79	107.75	0.15925					261	73	4	0	0	0	0.86201	1	11410	11410		16.717	3.7599	1	33626000	+		30857	29605	20403	20413	35232	35232					0.1345823497345009
LLIYKISNRFS	11	Unmodified	_LLIYKISNRFS_					0	0	0		nc|ENSG00000241294|A0A0C4DH68|IGKV2-24	nc|ENSG00000241294|A0A0C4DH68|IGKV2-24	nc|ENSG00000241294|A0A0C4DH68|IGKV2-24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.932373046875	3	451.934484	1352.78162	-1.2127	-0.00054806	-2.8312	-0.0012795	-4.0439	-0.0018276	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.74771	1	10286	10286		22.562	2.2466	1	518100			30858	15279	20404	20414	35233	35233					0.1193418293673858
LLIYLVESVV	10	Unmodified	_LLIYLVESVV_					0	0	0			REV__ENSG00000169181|ENST00000447459|GSG1L	REV__ENSG00000169181|ENST00000447459|GSG1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3563842773438	2	574.352283	1146.69001	2.697	0.001549	3.6163	0.002077	6.3133	0.0036261	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.86452	1	10788	10788		30.504	5.9844	1	738540	+		30859	21558	20405	20415	35234	35234					0.12253499519533761
LLIYSFCI	8	Unmodified	_LLIYSFCI_					0	0	0		ENST00000474795.5_1_3:62280441-62302825:-|nuORF	ENST00000474795.5_1_3:62280441-62302825:-|nuORF	ENST00000474795.5_1_3:62280441-62302825:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.2670593261719	2	486.267164	970.519776	1.0382	0.00050483	-1.0456	-0.00050845	-0.0074388	-3.6173E-06	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.87276	1	8868	8868		29.842	0.67148	1	1819100			30860	12311	20406	20416	35235	35235					0.03333685316295032
LLIYVEKRILN	11	Unmodified	_LLIYVEKRILN_					0	0	0			REV__ENSG00000169252|ENST00000305988|ADRB2	REV__ENSG00000169252|ENST00000305988|ADRB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.6238098144531	3	458.622017	1372.84422	0.76245	0.00034968	3.1381	0.0014392	3.9006	0.0017889	458.62336440411514	106.9	1.2829	106.99	106.6	107.88	0.091255					93	30	4	0	0	0	0.76892	1	11438	11438		17.833	2.5	1	3364000	+		30861	21565	20407	20417	35236	35236					0.17271329004938707
LLKAAALL	8	Unmodified	_LLKAAALL_					0	0	0			REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78515625	2	406.783839	811.553125	-0.045049	-1.8325E-05	3.807	0.0015486	3.7619	0.0015303	406.78524079935227	33.287	0.97472	33.291	32.894	33.869	0.0030785					79	22	4	0	0	0	0.80963	1	1976	1976		15.636	0	1	346170	+		30862	21784	20408	20418	35237	35237					0.13981055150509292
LLKADEPLPLV	11	Unmodified	_LLKADEPLPLV_					0	0	0			REV__ENST00000335565.4_2_X:144903251-144903611:+|nuORF	REV__ENST00000335565.4_2_X:144903251-144903611:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.24688720703125	3	403.248068	1206.72238	0.73411	0.00029603	-3.7	-0.001492	-2.9659	-0.001196	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.75495	1	11042	11042		18.531	0.69791	1	18617000	+		30863	25171	20409	20419	35238	35238					0.12728286922538246
LLKADEPLPLV	11	Unmodified	_LLKADEPLPLV_					0	0	0			REV__ENST00000335565.4_2_X:144903251-144903611:+|nuORF	REV__ENST00000335565.4_2_X:144903251-144903611:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3661499023438	2	604.368464	1206.72238	-1.2751	-0.0007706	-2.0171	-0.0012191	-3.2921	-0.0019897	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.66929	1	10978	10978		36.447	0	1	103250000	+		30864	25171	20409	20419	35239	35239					0.12728286922538246
LLKANGPV	8	Unmodified	_LLKANGPV_					0	0	0			REV__ENST00000606788.5_1_20:44518901-44519711:+|nuORF	REV__ENST00000606788.5_1_20:44518901-44519711:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2586975097656	2	406.255446	810.496338	0.32239	0.00013097	4.1267	0.0016765	4.4491	0.0018075	406.25699058298386	55.031	2.344	55.122	53.969	56.313	0.091167					99	72	2	0	0	0	0.81548	1	4461	4461		20.482	0	1	315510	+		30865	29375	20410	20420	35240	35240					0.08351007593989834
LLKAVLREED	10	Unmodified	_LLKAVLREED_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	593.3442993164062	2	593.34552	1184.67649	-0.61427	-0.00036447	-1.2195	-0.00072357	-1.8337	-0.001088	593.3447041008176	103.62	2.4136	103.61	103.22	105.64	-0.0035706					155	57	4	0	0	0	0.86348	1	11129	11129		31.53	0.96095	1	2207400			30866	6691	20411	20421	35241	35241					0.09153641740317653
LLKAVTPKHI	10	Unmodified	_LLKAVTPKHI_					0	0	0		ENST00000578036.5_1_17:62801160-62825332:-|nuORF;ENST00000584585.1_1_17:62817020-62825332:-|nuORF;ENST00000580919.5_1_17:62811233-62825332:-|nuORF;ENST00000397718.8_1_17:62816508-62825332:-|nuORF	ENST00000578036.5_1_17:62801160-62825332:-|nuORF	ENST00000578036.5_1_17:62801160-62825332:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.34033203125	2	560.366059	1118.71756	3.1336	0.001756	4.2871	0.0024023	7.4207	0.0041583	560.36839928978	102.33	0.33058	102.28	101.97	102.3	-0.047005					12	7	2	0	0	0	0.37624	1	11139	11139		32.812	16.339	1	223940			30867	11159	20412	20422	35242	35242					0.1629544757045096
LLKCVVIVT	9	Unmodified	_LLKCVVIVT_					0	0	0			REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|94|2|sense	REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|94|2|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3008117675781	2	494.317189	986.619824	0.77091	0.00038107	-2.4831	-0.0012274	-1.7122	-0.00084636	494.3163923416378	97.862	0.43935	98.022	97.796	98.236	0.16073					15	9	2	0	0	0	0.20789	1	10142	10142		24.203	5.8783	1	42982	+		30868	29468	20413	20423	35243	35243					0.12597922650115834
LLKCVVIVT	9	Unmodified	_LLKCVVIVT_					0	0	0			REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|94|2|sense	REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|94|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.30059814453125	2	494.317189	986.619824	0.85622	0.00042324	2.934	0.0014503	3.7902	0.0018736	494.3188213796169	97.23	0.64687	97.621	97.323	97.97	0.39065					19	15	2	0	0	0	0.20789	1	11754	11754		30.504	7.4612	1	282420	+		30869	29468	20413	20423	35244	35244					0.12597922650115834
LLKDALLEP	9	Unmodified	_LLKDALLEP_					0	0	0		nc|ENSG00000008382|Q8N594-2|MPND;nc|ENSG00000008382|Q8N594|MPND;ENSG00000008382|ENST00000599840|MPND	nc|ENSG00000008382|Q8N594-2|MPND	nc|ENSG00000008382|Q8N594-2|MPND	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3045349121094	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.577	1	50.607	50.107	51.107	0.029629								0	0	0	0.29134	1	3980	3980		34.173	3.6689	1				30870	745	20414	20424	35245	35245					0.09632084279905939
LLKDLLPG	8	Unmodified	_LLKDLLPG_					0	0	0		ENSG00000196449|ENST00000373044|YRDC	ENSG00000196449|ENST00000373044|YRDC	ENSG00000196449|ENST00000373044|YRDC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3001708984375	2	434.778754	867.542954	-0.1676	-7.287E-05	2.9807	0.0012959	2.8131	0.0012231	434.7800669549695	71.183	0.82172	71.217	70.966	71.788	0.034004					57	38	2	0	0	0	0.4196	1	6786	6786		42.474	0	1	73341			30871	8056	20415	20425	35246	35246					0.10388447425282266
LLKDLLPG	8	Unmodified	_LLKDLLPG_					0	0	0		ENSG00000196449|ENST00000373044|YRDC	ENSG00000196449|ENST00000373044|YRDC	ENSG00000196449|ENST00000373044|YRDC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3003234863281	2	434.778754	867.542954	1.2057	0.00052421	2.3115	0.001005	3.5172	0.0015292	434.7795873702017	72.689	0.89731	72.731	72.37	73.267	0.042114					61	38	2	0	0	0	0.4196	1	7023	7023		50.025	0	1	70853			30872	8056	20415	20425	35247	35247					0.10388447425282266
LLKDLLPG	8	Unmodified	_LLKDLLPG_					0	0	0		ENSG00000196449|ENST00000373044|YRDC	ENSG00000196449|ENST00000373044|YRDC	ENSG00000196449|ENST00000373044|YRDC	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.3982	-0.0006079	4.5244	0.0019671	3.1262	0.0013592	434.7806920023209	73.008	0.70313	73.008	72.828	73.531	0	0.13865	0.0012863	NaN	50.025	43	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66550			30873	8056	20415	20425							0.10388447425282266
LLKDPLLG	8	Unmodified	_LLKDPLLG_					0	0	0			REV__chr19:9474325-9475284|30|14.37|0.55|4.71|-|2|ZNF560,ZNF560|1	REV__chr19:9474325-9475284|30|14.37|0.55|4.71|-|2|ZNF560,ZNF560|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801513671875	2	434.778754	867.542954	0.083396	3.6259E-05	3.2514	0.0014137	3.3348	0.0014499	434.78005466270537	34.317	1.0002	34.271	33.763	34.763	-0.045815					125	41	4	0	0	0	0.87064	1	1724	1724		29.15	2.3535	1	3033400	+		30874	15729	20416	20426	35248	35248					0.10388447425282266
LLKEEKLFN	9	Unmodified	_LLKEEKLFN_					0	0	0			REV__nc|ENSG00000163517|Q96DB2-2|HDAC11	REV__nc|ENSG00000163517|Q96DB2-2|HDAC11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.330078125	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.76764	1	9096	9096		34.173	2.6427	1	11042000	+		30875	29983	20417	20427	35249	35249					0.0881915819995811
LLKELAHILGF	11	Unmodified	_LLKELAHILGF_					0	0	0		nc|ENSG00000163873|Q13003-2|GRIK3;ENSG00000163873|ENST00000373091|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3828735351562	2	627.384448	1252.75434	-0.21836	-0.00013699	-3.1031	-0.0019469	-3.3215	-0.0020839	627.382511862194	112.54	0.45316	112.48	112.28	112.73	-0.063889					31	15	4	0	0	0	0.7434	1	12218	12218		23.523	6.8053	1	464930			30876	5876	20418	20428	35250	35250					0.1380769939635229
LLKELAHILGF	11	Unmodified	_LLKELAHILGF_					0	0	0		nc|ENSG00000163873|Q13003-2|GRIK3;ENSG00000163873|ENST00000373091|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3816528320312	2	627.384448	1252.75434	0.9271	0.00058165	-4.088	-0.0025648	-3.161	-0.0019831	627.3816034705419	112.22	0.3718	112.29	112.11	112.48	0.066025					31	13	4	0	0	0	0.75041	1	12074	12074		21.96	2.8564	1	1862300			30877	5876	20418	20428	35251	35251					0.1380769939635229
LLKELAHILGF	11	Unmodified	_LLKELAHILGF_					0	0	0		nc|ENSG00000163873|Q13003-2|GRIK3;ENSG00000163873|ENST00000373091|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3837280273438	2	627.384448	1252.75434	-1.2001	-0.00075294	-2.5968	-0.0016292	-3.7969	-0.0023821	627.3827611804128	112.09	1.416	112.07	111.56	112.98	-0.01989					130	45	4	0	0	0	0.68378	1	11967	11967		34.173	0.25091	1	42384000			30878	5876	20418	20428	35252	35252					0.1380769939635229
LLKELAHILGF	11	Unmodified	_LLKELAHILGF_					0	0	0		nc|ENSG00000163873|Q13003-2|GRIK3;ENSG00000163873|ENST00000373091|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	nc|ENSG00000163873|Q13003-2|GRIK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3870239257812	2	627.384448	1252.75434	-1.2002	-0.00075298	-2.0537	-0.0012885	-3.2539	-0.0020414	627.3828993948404	113.32	6.698	113.28	113.24	119.94	-0.044777					223	114	4	0	0	0	0.72106	1	12152	12152		28.081	4.5588	1	3630600			30879	5876	20418	20428	35253	35253					0.1380769939635229
LLKEMKRR	8	Unmodified	_LLKEMKRR_					0	0	0		ENST00000587974.1_1_18:43487913-43547205:-|nuORF;nc|ENSG00000152223|Q9HCE0-2|EPG5;ENSG00000152223|ENST00000282041|EPG5;ENST00000585906.5_1_18:43437816-43497657:-|nuORF	ENST00000587974.1_1_18:43487913-43547205:-|nuORF	ENST00000587974.1_1_18:43487913-43547205:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267822265625	2	537.334236	1072.65392	3.4027	0.0018284	-1.3684	-0.00073528	2.0343	0.0010931	537.3356454428896	101.22	0.48505	101.17	100.84	101.32	-0.050163					13	11	2	0	0	0	0.4196	1	11013	11013		29.15	12.676	1	31819			30880	5163	20419	20429	35254	35254					0.12049763861728024
LLKEPVGI	8	Unmodified	_LLKEPVGI_					0	0	0			REV__ENST00000485287.5_1_X:51811260-51812300:-|nuORF	REV__ENST00000485287.5_1_X:51811260-51812300:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7798156738281	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.87276	1	1873	1873		29.842	0	1	2158200	+		30881	27522	20420	20430	35255	35255					0.10388447425293634
LLKEQQDLLRK	11	Unmodified	_LLKEQQDLLRK_					0	0	0			REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.9484558105469	3	461.948793	1382.82455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.38	1	107.52	107.02	108.02	0.13866								0	0	0	0.56276	1	11533	11533		20.315	0	1		+		30882	28452	20421	20431	35256	35256					0.14844952994167215
LLKEVLDVP	9	Unmodified	_LLKEVLDVP_					0	0	0			REV__ENSG00000100504|ENST00000216392|PYGL	REV__ENSG00000100504|ENST00000216392|PYGL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3171997070312	2	513.3157	1024.61685	-0.38471	-0.00019748	2.4513	0.0012583	2.0666	0.0010608	513.3169360200682	55.22	1.0911	55.284	54.878	55.969	0.063721					55	37	2	0	0	0	0.69624	1	4608	4608		40.778	3.6191	1	243480	+		30883	17199	20422	20432	35257	35257					0.1055237079692688
LLKEVLDVP	9	Unmodified	_LLKEVLDVP_					0	0	0			REV__ENSG00000100504|ENST00000216392|PYGL	REV__ENSG00000100504|ENST00000216392|PYGL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.319091796875	2	513.3157	1024.61685	-0.34905	-0.00017917	2.3674	0.0012152	2.0183	0.001036	513.8184615031363	53.608	1.3919	53.546	53.049	54.441	-0.062065					64	37	3	0	0	0	0.72402	1	4361	4361		38.806	1.647	1	277190	+		30884	17199	20422	20432	35258	35258					0.1055237079692688
LLKFLGTGIN	10	Unmodified	_LLKFLGTGIN_					0	0	0			REV__ENSG00000148606|ENST00000372371|POLR3A	REV__ENSG00000148606|ENST00000372371|POLR3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3267211914062	2	538.329142	1074.64373	0.8402	0.00045231	-4.254	-0.0022901	-3.4138	-0.0018378	538.3268220989208	104.45	1.2184	104.56	103.9	105.12	0.11684					92	29	4	0	0	0	0.86471	1	11144	11144		30.318	1.1682	1	1399300	+		30885	20127	20423	20433	35259	35259					0.10939479408148145
LLKFLVKYLAS	11	Unmodified	_LLKFLVKYLAS_					0	0	0			REV__nc|ENSG00000183780|Q8IY50|SLC35F3	REV__nc|ENSG00000183780|Q8IY50|SLC35F3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.2557067871094	3	432.275958	1293.80605	2.7184	0.0011751	1.6645	0.00071953	4.3829	0.0018946	432.6101206541019	107.58	0.50217	107.54	107.34	107.85	-0.031487					25	11	3	0	0	0	0.17305	1	11900	11900		30.569	8.8831	1	191430	+		30886	22627	20424	20434	35260	35260					0.1708944309027629
LLKGFAIL	8	Unmodified	_LLKGFAIL_					0	0	0		ENSG00000176246|ENST00000315683|OR4L1	ENSG00000176246|ENST00000315683|OR4L1	ENSG00000176246|ENST00000315683|OR4L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77130126953125	2	437.791664	873.568775	1.7482	0.00076535	-3.6607	-0.0016026	-1.9125	-0.00083726	437.790135681279	36.44	0.25082	36.881	36.702	36.952	0.44043					9	5	2	0	0	0	0.4196	1	2887	2887		8.2313	0	1	53047			30887	7067	20425	20435	35261	35261					0.1269334166754561
LLKGLSDELVL	11	Unmodified	_LLKGLSDELVL_					0	0	0		ENSG00000166800|ENST00000280706|LDHAL6A	ENSG00000166800|ENST00000280706|LDHAL6A	ENSG00000166800|ENST00000280706|LDHAL6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.5806579589844	3	400.579706	1198.71729	-0.18598	-7.4498E-05	2.3717	0.00095004	2.1857	0.00087554	400.58047362638064	112.54	0.2858	112.48	112.44	112.73	-0.063889					14	8	2	0	0	0	0.75906	1	12220	12220		20.03	5.9445	1	148470			30888	6229	20426	20436	35262	35262					0.1258798305993878
LLKGLSDELVL	11	Unmodified	_LLKGLSDELVL_					0	0	0		ENSG00000166800|ENST00000280706|LDHAL6A	ENSG00000166800|ENST00000280706|LDHAL6A	ENSG00000166800|ENST00000280706|LDHAL6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.9129638671875	3	400.579706	1198.71729	3.1796	0.0012737	-0.89864	-0.00035998	2.2809	0.00091369	400.57916816268914	115.86	0.63822	115.89	115.41	116.05	0.026466					29	20	2	0	0	0	0.74022	1	12715	12715		24.232	2.5461	1	56920			30889	6229	20426	20436	35263	35263					0.1258798305993878
LLKGLVRYAM	10	Unmodified	_LLKGLVRYAM_					0	0	0			REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3532104492188	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.95	1	112.92	112.42	113.42	-0.024811								0	0	0	0.45132	1	12490	12490		44.117	16.235	1		+		30890	26298	20427	20437	35264	35264					0.11479801318728278
LLKGLVRYAM	10	Unmodified	_LLKGLVRYAM_					0	0	0			REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3543701171875	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.21	1	114.19	113.69	114.69	-0.024452								0	0	0	0.45132	1	12650	12650		29.15	1.2673	1		+		30891	26298	20427	20437	35265	35265					0.11479801318728278
LLKGLVRYAM	10	Unmodified	_LLKGLVRYAM_					0	0	0			REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3525390625	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.24	1	115.22	114.72	115.72	-0.02433								0	0	0	0.45132	1	12766	12766		20.947	1.587	1		+		30892	26298	20427	20437	35266	35266					0.11479801318728278
LLKGLVRYAM	10	Unmodified	_LLKGLVRYAM_					0	0	0			REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3532104492188	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.89	1	116.87	116.37	117.37	-0.02433								0	0	0	0.45132	1	12947	12947		16.473	1.6083	1		+		30893	26298	20427	20437	35267	35267					0.11479801318728278
LLKGLVRYAM	10	Unmodified	_LLKGLVRYAM_					0	0	0			REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.355712890625	2	582.352094	1162.68964	0.16989	9.8934E-05	2.4248	0.0014121	2.5947	0.0015111	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.86589	2	12376	12376;12405		29.15	3.1702	1	635410	+		30894	26298	20427	20437	35268;35269	35268					0.11479801318728278
LLKGLVRYAM	10	Unmodified	_LLKGLVRYAM_					0	0	0			REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	REV__ENST00000405995.5_1_9:134308015-134308084:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3533935546875	2	582.352094	1162.68964	-1.3468	-0.00078434	3.9839	0.00232	2.637	0.0015357	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.86452	1	12177	12177		30.504	6.9809	1	3937500	+		30895	26298	20427	20437	35270	35270					0.11479801318728278
LLKHRRLVLS	10	Unmodified	_LLKHRRLVLS_					0	0	0		nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1;ENSG00000134369|ENST00000685211|NAV1;nc|ENSG00000134369|Q8NEY1-5|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.23797607421875	3	412.275063	1233.80336	-0.26343	-0.00010861	-0.92875	-0.0003829	-1.1922	-0.00049151	412.6087269442638	76.196	0.1823	76.147	76.066	76.248	-0.048271					7	4	2	0	0	0	0.37624	1	7549	7549		7.0187	0	1	22979			30896	3931	20428	20438	35271	35271					0.19581032475980464
LLKHRRLVLS	10	Unmodified	_LLKHRRLVLS_					0	0	0		nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1;ENSG00000134369|ENST00000685211|NAV1;nc|ENSG00000134369|Q8NEY1-5|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2380065917969	3	412.275063	1233.80336	-1.5479	-0.00063815	-4.3697	-0.0018015	-5.9176	-0.0024397	412.6079042228647	77.636	0.13371	77.728	77.622	77.756	0.091438					6	5	2	0	0	0	0.37624	1	7262	7262		15.333	11.25	1	39486			30897	3931	20428	20438	35272	35272					0.19581032475980464
LLKHSSAASTS	11	Unmodified	_LLKHSSAASTS_					0	0	0		ENST00000452973.6_1_6:142539876-142539987:+|nuORF	ENST00000452973.6_1_6:142539876-142539987:+|nuORF	ENST00000452973.6_1_6:142539876-142539987:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.2994384765625	2	551.29857	1100.58259	-0.40411	-0.00022279	-0.027607	-1.522E-05	-0.43172	-0.00023801	551.2984891408928	31.954	0.61486	31.964	31.626	32.241	0.0109					26	16	2	0	0	0	0.61369	1	1766	1766		42.864	0.46813	1	60081			30898	11931	20429	20439	35273	35273					0.03631922638055585
LLKICLQGEGP	11	Unmodified	_LLKICLQGEGP_					0	0	0		ENST00000345617.7_1_2:239971330-239971666:-|nuORF	ENST00000345617.7_1_2:239971330-239971666:-|nuORF	ENST00000345617.7_1_2:239971330-239971666:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.830810546875	2	585.831191	1169.64783	-0.92321	-0.00054084	-0.50027	-0.00029307	-1.4235	-0.00083391	585.8307293050794	57.888	1.4017	57.888	57.479	58.881	0					105	56	3	0	0	0	0.69995	1	4987	4987		31.53	0	1	164040			30899	10306	20430	20440	35274	35274					0.06979200839532496
LLKIFNPVL	9	Unmodified	_LLKIFNPVL_					0	0	0		ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.83935546875	2	528.844428	1055.6743	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.738	1	50.714	50.214	51.214	-0.02343								0	0	0	0.2969	1	4409	4409		31.955	6.5047	1				30900	7166	20431	20441	35275	35275					0.14869257793156976
LLKIFQYT	8	Unmodified	_LLKIFQYT_					0	0	0		ENST00000455321.1_1_10:52486845-52487529:-|nuORF;ENST00000398621.3_1_10:81652047-81652404:-|nuORF;nc|ENSG00000164219|P53609-2|PGGT1B;ENSG00000164219|ENST00000419445|PGGT1B	ENST00000455321.1_1_10:52486845-52487529:-|nuORF	ENST00000455321.1_1_10:52486845-52487529:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.30224609375	2	513.305136	1024.59572	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.388	1	72.348	71.848	72.848	-0.04039								0	0	0	0.29353	1	7069	7069		28.254	6.2944	1				30901	11949	20432	20442	35276	35276					0.08440405488067881
LLKIKLITFF	10	Unmodified	_LLKIKLITFF_					0	0	0		ENSG00000279169|ENST00000625019|PRAMEF13;ENSG00000204481|ENST00000334600|PRAMEF14;ENSG00000120952|ENST00000240189|PRAMEF2;ENSG00000116721|ENST00000332296|PRAMEF1	ENSG00000279169|ENST00000625019|PRAMEF13	ENSG00000279169|ENST00000625019|PRAMEF13	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7664794921875	3	412.609049	1234.80532	-0.29103	-0.00012008	-3.8284	-0.0015796	-4.1194	-0.0016997	412.6080761443631	42.383	0.16653	42.337	42.273	42.44	-0.045467					6	5	2	0	0	0	0.37624	1	2843	2843		1.8869	0	1	47367			30902	2942	20433	20443	35277	35277					0.1973064844119108
LLKIKSAHKLL	11	Unmodified	_LLKIKSAHKLL_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.4293212890625	2	632.42919	1262.84383	-0.021077	-1.333E-05	1.2003	0.0007591	1.1792	0.00074577	632.4296452184271	108.26	0.70177	108.26	107.96	108.66	0					68	33	3	0	0	0	0.78309	3	11281	11259;11281;11298		14.865	3.7484	1	3975500			30903	2846	20434	20444	35278;35279;35280	35279					0.2229195407574025
LLKIKSAHKLL	11	Unmodified	_LLKIKSAHKLL_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	632.4307861328125	2	632.42919	1262.84383	-0.16111	-0.00010189	1.4498	0.00091687	1.2887	0.00081498	632.4298123182796	108.36	0.78529	108.31	108.01	108.8	-0.042404					66	29	3	0	0	0	0.76322	2	11806	11787;11806		19.104	2.3861	1	4385300			30904	2846	20434	20444	35281;35282	35282					0.2229195407574025
LLKIKSAHKLL	11	Unmodified	_LLKIKSAHKLL_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	632.9300537109375	2	632.42919	1262.84383	2.8292	0.0017893	-1.6155	-0.0010217	1.2137	0.0007676	632.4278485771309	108.34	0.724	108.31	108	108.72	-0.031487					56	31	3	0	0	0	0.76322	2	12034	12002;12034		19.104	7.5925	1	2849900			30905	2846	20434	20444	35283;35284	35284					0.2229195407574025
LLKIKSAHKLL	11	Unmodified	_LLKIKSAHKLL_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	632.4351806640625	2	632.42919	1262.84383	1.2265	0.00077567	0.0041478	2.6232E-06	1.2306	0.00077829	632.4287764251125	108.29	0.57515	108.33	108.03	108.61	0.034355					58	25	3	0	0	0	0.78309	4	11891	11890;11891;11906;11912		14.865	4.5996	1	3438700			30906	2846	20434	20444	35285;35286;35287;35288	35286					0.2229195407574025
LLKIKSAHKLL	11	Unmodified	_LLKIKSAHKLL_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.4321899414062	2	632.42919	1262.84383	1.461	0.00092401	-0.48958	-0.00030962	0.97147	0.00061438	632.4287200366232	108.38	0.64588	108.51	108.19	108.83	0.13026					29	17	2	0	0	0	0.78309	1	11696	11696		14.865	0.72775	1	3788100			30907	2846	20434	20444	35289	35289					0.2229195407574025
LLKIKSAHKLL	11	Unmodified	_LLKIKSAHKLL_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	632.4306640625	2	632.42919	1262.84383	0.9319	0.00058936	0.21544	0.00013625	1.1473	0.00072561	632.4290216403841	108.39	0.63701	108.47	108.17	108.81	0.084404					45	23	3	0	0	0	0.78309	3	11638	11623;11638;11657		14.865	2.5885	1	3467900			30908	2846	20434	20444	35290;35291;35292	35291					0.2229195407574025
LLKIKSAHKLL	11	Unmodified	_LLKIKSAHKLL_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	632.4273681640625	2	632.42919	1262.84383	-1.1838	-0.00074867	2.4496	0.0015492	1.2658	0.00080053	632.4305366673894	108.36	0.62795	108.38	108.12	108.75	0.020561					49	27	3	0	0	0	0.80228	2	11582	11573;11582		10.866	3.393	1	2641800			30909	2846	20434	20444	35293;35294	35294					0.2229195407574025
LLKIKSAHKLL	11	Unmodified	_LLKIKSAHKLL_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	632.428466796875	2	632.42919	1262.84383	2.2139	0.0014001	-0.54581	-0.00034519	1.6681	0.0010549	632.4286052238532	109.98	1.6135	110.03	109.4	111.01	0.054062					169	66	3	0	0	0	0.78986	1	13272	13272		13.454	1.2474	1	3246600			30910	2846	20434	20444	35295	35295					0.2229195407574025
LLKILRAA	8	Unmodified	_LLKILRAA_					0	0	0			REV__nc|ENSG00000198216|Q15878-2|CACNA1E;REV__nc|ENSG00000141837|O00555-5|CACNA1A;REV__nc|ENSG00000148408|Q00975-2|CACNA1B	REV__nc|ENSG00000198216|Q15878-2|CACNA1E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.314208984375	2	449.315838	896.617122	0.060144	2.7024E-05	-2.6688	-0.0011991	-2.6086	-0.0011721	449.3144620861982	21.476	1.5551	21.033	20.161	21.716	-0.44324					87	36	3	0	0	0	0.86791	1	783	783		28.254	7.7724	1	594410	+		30911	23309;19710;20117	20435	20445	35296	35296					0.1646783530745779
LLKITKTQS	9	Unmodified	_LLKITKTQS_					0	0	0		nc|ENSG00000130167|Q9UKR8|TSPAN16;nc|ENSG00000130167|Q9UKR8-3|TSPAN16;ENSG00000130167|ENST00000590327|TSPAN16	nc|ENSG00000130167|Q9UKR8|TSPAN16	nc|ENSG00000130167|Q9UKR8|TSPAN16	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.8673095703125	2	516.326599	1030.63865	3.1032	0.0016022	-3.8177	-0.0019712	-0.71456	-0.00036895	516.3265137994842	109.12	0.17259	109.09	108.97	109.14	-0.029381					6	4	2	0	0	0	0.20789	1	12089	12089		26.693	0	1	328030			30912	14903	20436	20446	35297	35297					0.12455175545505881
LLKKAKICSLH	11	Unmodified	_LLKKAKICSLH_					0	0	0			REV__ENSG00000160007|ENST00000672722|ARHGAP35	REV__ENSG00000160007|ENST00000672722|ARHGAP35	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3906860351562	2	627.391751	1252.76895	-1.2004	-0.00075309	-3.167	-0.001987	-4.3674	-0.0027401	627.389691733061	110.14	0.21056	110.14	110.04	110.25	0.0060425					9	6	2	0	0	0	0.17245	1	11743	11743		30.318	21.135	1	132650	+		30913	20688	20437	20447	35298	35298					0.1526744827285711
LLKKKSSESTT	11	Unmodified	_LLKKKSSESTT_					0	0	0		ENSG00000171487|ENST00000390649|NLRP5	ENSG00000171487|ENST00000390649|NLRP5	ENSG00000171487|ENST00000390649|NLRP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3548583984375	2	611.356085	1220.69762	-0.40517	-0.00024771	0.17305	0.00010579	-0.23213	-0.00014191	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.70737	1	9683	9683		30.318	2.4355	1	5373200			30914	6670	20438	20448	35299	35299					0.09609607049173974
LLKKLDKPDSI	11	Unmodified	_LLKKLDKPDSI_					0	0	0			REV__ENSG00000065485|ENST00000316218|PDIA5	REV__ENSG00000065485|ENST00000316218|PDIA5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	424.2500915527344	3	423.930739	1268.77039	0.73391	0.00031113	3.1355	0.0013292	3.8694	0.0016404	423.9321253503071	107.29	0.76841	107.38	107.07	107.84	0.091255					26	18	2	0	0	0	0.1728	1	11471	11471		16.53	0	1	110830	+		30915	16501	20439	20449	35300	35300					0.14675360842625196
LLKKLMMLM	9	Unmodified	_LLKKLMMLM_					0	0	0			REV__ENST00000535593.5_1_12:21668856-21668949:+|nuORF	REV__ENST00000535593.5_1_12:21668856-21668949:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8383178710938	2	560.836377	1119.6582	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.73	1	116.76	116.26	117.26	0.026466								0	0	0	0.31088	1	12826	12826		26.796	0.10319	1		+		30916	28392	20440	20450	35301	35301					0.10315768968780503
LLKKVKFIPGS	11	Unmodified	_LLKKVKFIPGS_					0	0	0		ENSG00000067704|ENST00000366922|IARS2	ENSG00000067704|ENST00000366922|IARS2	ENSG00000067704|ENST00000366922|IARS2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.4022216796875	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.737	1	23.79	23.29	24.29	0.05291								0	0	0	0.56276	1	773	773		23.523	3.5259	1				30917	1187	20441	20451	35302	35302					0.18548576293073893
LLKKVKTTT	9	Unmodified	_LLKKVKTTT_					0	0	0		ENST00000519124.5_1_8:124335233-124335293:-|nuORF	ENST00000519124.5_1_8:124335233-124335293:-|nuORF	ENST00000519124.5_1_8:124335233-124335293:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.314208984375	2	516.344792	1030.67503	-0.68798	-0.00035523	-3.2117	-0.0016583	-3.8996	-0.0020136	516.3425410093436	99.283	0.16578	99.283	99.182	99.348	0					5	3	2	0	0	0	0.20789	1	10013	10013		23.042	0	1	58780			30918	13129	20442	20452	35303	35303					0.1609205244221812
LLKKVKTTT	9	Unmodified	_LLKKVKTTT_					0	0	0		ENST00000519124.5_1_8:124335233-124335293:-|nuORF	ENST00000519124.5_1_8:124335233-124335293:-|nuORF	ENST00000519124.5_1_8:124335233-124335293:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3137817382812	2	516.344792	1030.67503	0.87702	0.00045284	-1.306	-0.00067437	-0.42902	-0.00022152	516.8461931572464	99.589	0.2171	99.636	99.546	99.764	0.047531					6	4	2	0	0	0	0.20789	1	10672	10672		15.642	3.435	1	37143			30919	13129	20442	20452	35304	35304					0.1609205244221812
LLKKVKTTT	9	Unmodified	_LLKKVKTTT_					0	0	0		ENST00000519124.5_1_8:124335233-124335293:-|nuORF	ENST00000519124.5_1_8:124335233-124335293:-|nuORF	ENST00000519124.5_1_8:124335233-124335293:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.31396484375	2	516.344792	1030.67503	0.8033	0.00041478	3.0845	0.0015927	3.8878	0.0020074	516.3460086386502	99.139	0.49993	99.296	98.814	99.314	0.15659					16	11	3	0	0	0	0.20789	1	10291	10291		27.882	17.017	1	414980			30920	13129	20442	20452	35305	35305					0.1609205244221812
LLKKVSLRPLP	11	Unmodified	_LLKKVSLRPLP_					0	0	0			REV__ENSG00000118873|ENST00000358951|RAB3GAP2	REV__ENSG00000118873|ENST00000358951|RAB3GAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	632.429931640625	2	632.42919	1262.84383	-0.16111	-0.00010189	1.4498	0.00091687	1.2887	0.00081498	632.4298123182796	108.36	0.78529	108.31	108.01	108.8	-0.042404					66	29	3	0	0	0	0.78309	1	11799	11799		14.865	0.72775	1	4385300	+		30921	18329	20443	20453	35306	35306					0.2229195407574025
LLKKVSLRPLP	11	Unmodified	_LLKKVSLRPLP_					0	0	0			REV__ENSG00000118873|ENST00000358951|RAB3GAP2	REV__ENSG00000118873|ENST00000358951|RAB3GAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	632.4300537109375	2	632.42919	1262.84383	2.8292	0.0017893	-1.6155	-0.0010217	1.2137	0.0007676	632.4278485771309	108.34	0.724	108.31	108	108.72	-0.031487					56	31	3	0	0	0	0.76322	1	12019	12019		19.104	4.9664	1	2849900	+		30922	18329	20443	20453	35307	35307					0.2229195407574025
LLKKVSLRPLP	11	Unmodified	_LLKKVSLRPLP_					0	0	0			REV__ENSG00000118873|ENST00000358951|RAB3GAP2	REV__ENSG00000118873|ENST00000358951|RAB3GAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.42919921875	2	632.42919	1262.84383	1.461	0.00092401	-0.48958	-0.00030962	0.97147	0.00061438	632.4287200366232	108.38	0.64588	108.51	108.19	108.83	0.13026					29	17	2	0	0	0	0.80784	2	11684	11645;11684		9.7057	0	1	3788100	+		30923	18329	20443	20453	35308;35309	35309					0.2229195407574025
LLKKYLMKRRW	11	Unmodified	_LLKKYLMKRRW_					0	0	0		ENSG00000101306|ENST00000375985|MYLK2	ENSG00000101306|ENST00000375985|MYLK2	ENSG00000101306|ENST00000375985|MYLK2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.64984130859375	3	512.318274	1533.93299	-0.050962	-2.6109E-05	-0.69922	-0.00035822	-0.75019	-0.00038433	512.3179293821067	107.9	0.23258	107.86	107.69	107.93	-0.042404					11	5	3	0	0	0	0.18372	1	11761	11761		3.4087	0	1	10176000			30924	1927	20444	20454	35310	35310					0.18738465763590284
LLKLFKLL	8	Unmodified	_LLKLFKLL_					0	0	0			REV__ENST00000589042.5_3_2:179517806-179527536:-|nuORF	REV__ENST00000589042.5_3_2:179517806-179527536:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3009338378906	2	494.351889	986.689225	-0.67663	-0.00033449	3.0631	0.0015143	2.3865	0.0011798	494.3534228074608	97.199	0.37067	97.247	97.043	97.414	0.048157					14	8	2	0	0	0	0.4196	1	10330	10330		4.6817	0	1	143240	+		30925	29154	20445	20455	35311	35311					0.1953474966118165
LLKLFKRI	8	Unmodified	_LLKLFKRI_					0	0	0			REV__L1MEd_dup15041|chr11:43857788-43858329:-|1.793309270709539|0.3605782472414646|2.31|63.0|2|1|sense	REV__L1MEd_dup15041|chr11:43857788-43858329:-|1.793309270709539|0.3605782472414646|2.31|63.0|2|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8285522460938	2	515.860412	1029.70627	-0.05481	-2.8274E-05	1.4443	0.00074506	1.3895	0.00071678	515.8612734034488	82.949	0.48895	83.381	83.129	83.618	0.43108					19	11	2	0	0	0	0.4196	1	9589	9589		13.775	0	1	254560	+		30926	29537	20446	20456	35312	35312					0.19260670266976376
LLKLGTQCV	9	Unmodified	_LLKLGTQCV_					0	0	0			REV__ENST00000541786.5_2_12:118693425-118704478:-|nuORF	REV__ENST00000541786.5_2_12:118693425-118704478:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79132080078125	2	487.788795	973.563038	0.84663	0.00041298	2.8765	0.0014031	3.7232	0.0018161	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.78536	1	8507	8507		29.15	0	1	2238600	+		30927	28489	20447	20457	35313	35313					0.0751987509358969
LLKLIHILS	9	Unmodified	_LLKLIHILS_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2974853515625	2	525.357702	1048.70085	0.68767	0.00036127	0.81339	0.00042732	1.5011	0.00078859	525.8577054358205	57.528	0.11271	58.083	58.003	58.116	0.55513					4	2	2	0	0	0	0.20789	1	6000	6000		17.365	5.8539	1	80673			30928	2871	20448	20458	35314	35314					0.17844946684522256
LLKLKQFLQ	9	Unmodified	_LLKLKQFLQ_					0	0	0			REV__ENSG00000118322|ENST00000327245|ATP10B	REV__ENSG00000118322|ENST00000327245|ATP10B	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	565.8658447265625	2	565.868434	1129.72232	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.497	1	22.546	22.046	23.046	0.048553								0	0	0	0.31828	1	674	674		24.203	2.2429	1		+		30929	18304	20449	20459	35315	35315					0.16264331713227875
LLKLLVDVTKH	11	Unmodified	_LLKLLVDVTKH_					0	0	0			REV__ENSG00000095564|ENST00000265990|BTAF1	REV__ENSG00000095564|ENST00000265990|BTAF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	427.30291748046875	3	426.942979	1277.80711	-1.7354	-0.00074091	2.0538	0.00087688	0.31847	0.00013597	427.27802462294176	64.207	0.13833	64.327	64.254	64.392	0.12004					6	4	2	0	0	0	0.17243	1	5635	5635		35.178	26.379	1	62663	+		30930	17061	20450	20460	35316	35316					0.17931657459166672
LLKLLVPS	8	Unmodified	_LLKLLVPS_					0	0	0			REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.78802490234375	2	441.804771	881.59499	-1.2665	-0.00055953	-3.1257	-0.0013809	-4.3921	-0.0019405	441.80323348023387	39.201	0.66525	39.154	38.825	39.49	-0.047001					22	15	2	0	0	0	0.4196	1	2827	2827		25.45	4.9683	1	114350	+		30931	30095	20451	20461	35317	35317					0.14945610839038181
LLKLLVPS	8	Unmodified	_LLKLLVPS_					0	0	0			REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78802490234375	2	441.804771	881.59499	-0.063369	-2.7997E-05	2.0691	0.00091412	2.0057	0.00088613	441.80535542162346	39.211	0.42776	39.158	38.8	39.228	-0.052731					19	12	2	0	0	0	0.4196	1	2340	2340		42.474	20.772	1	61670	+		30932	30095	20451	20461	35318	35318					0.14945610839038181
LLKLLVPS	8	Unmodified	_LLKLLVPS_					0	0	0			REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78826904296875	2	441.804771	881.59499	-0.5013	-0.00022148	-2.4939	-0.0011018	-2.9952	-0.0013233	441.80481739530165	37.942	0.68754	38.255	37.942	38.629	0.31312					36	17	3	0	0	0	0.4196	1	3091	3091		7.6903	0	1	953920	+		30933	30095	20451	20461	35319	35319					0.14945610839038181
LLKLLVPS	8	Unmodified	_LLKLLVPS_					0	0	0			REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	441.804771	881.59499	-0.41294	-0.00018244	6.5588	0.0028977	6.1459	0.0027153	441.8075048404609	39.525	0.38785	39.534	39.385	39.773	0.0092773	0.18795	0.0019936	NaN	42.474	9	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44863	+		30934	30095	20451	20461							0.14945610839038181
LLKLPNYSK	9	Unmodified	_LLKLPNYSK_					0	0	0		ENSG00000151148|ENST00000342494|UBE3B;ENST00000538070.1_1_12:109972254-109972584:+|nuORF	ENSG00000151148|ENST00000342494|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326904296875	2	538.329142	1074.64373	-1.4902	-0.0008022	-1.886	-0.0010153	-3.3762	-0.0018175	538.3280364010775	103.36	1.0546	103.48	103.07	104.12	0.11495					72	26	3	0	0	0	0.78124	1	10887	10887		30.318	4.7437	1	1412200			30935	5097	20452	20462	35320	35320					0.1093947940810267
LLKLPNYSK	9	Unmodified	_LLKLPNYSK_					0	0	0		ENSG00000151148|ENST00000342494|UBE3B;ENST00000538070.1_1_12:109972254-109972584:+|nuORF	ENSG00000151148|ENST00000342494|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3268432617188	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.76255	3	12212	12190;12212;12839		35.618	3.6504	1	4041000			30936	5097	20452	20462	35321;35322;35323	35322					0.1093947940810267
LLKLQERVLNN	11	Unmodified	_LLKLQERVLNN_					0	0	0		ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF	ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	447.2740173339844	3	447.273388	1338.79833	1.5068	0.00067396	-2.5991	-0.0011625	-1.0922	-0.00048853	447.2721343487067	107.14	1.0643	107.17	106.58	107.65	0.035622					102	24	6	0	0	0	0.75121	1	11809	11809		21.78	0.74819	1	9102100			30937	8159	20453	20463	35324	35324					0.14248683822711428
LLKLQHLRTL	10	Unmodified	_LLKLQHLRTL_					0	0	0			REV__nc|ENSG00000185946|Q96LT9-2|RNPC3	REV__nc|ENSG00000185946|Q96LT9-2|RNPC3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76629638671875	3	412.271319	1233.79213	-1.3558	-0.00055894	4.0199	0.0016573	2.6641	0.0010983	412.2729763755416	40.253	0.32957	40.209	40.051	40.38	-0.043697					11	7	2	0	0	0	0.37624	1	2963	2963		11.097	0	1	50778	+		30938	22809	20454	20464	35325	35325					0.18458210381845674
LLKLQHLRTL	10	Unmodified	_LLKLQHLRTL_					0	0	0			REV__nc|ENSG00000185946|Q96LT9-2|RNPC3	REV__nc|ENSG00000185946|Q96LT9-2|RNPC3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.23773193359375	3	412.271319	1233.79213	-0.43083	-0.00017762	3.2171	0.0013263	2.7863	0.0011487	412.2723308753558	74.748	0.16563	74.704	74.629	74.795	-0.043877					7	5	2	0	0	0	0.37624	1	7345	7345		15.333	7.5286	1	36361	+		30939	22809	20454	20464	35326	35326					0.18458210381845674
LLKLQKSTG	9	Unmodified	_LLKLQKSTG_					0	0	0		AluSx1_dup105873|chr19:18572335-18572629:-|5.977422081314459|0.0188810566591458|8.31|63.0|6|2|sense	AluSx1_dup105873|chr19:18572335-18572629:-|5.977422081314459|0.0188810566591458|8.31|63.0|6|2|sense	AluSx1_dup105873|chr19:18572335-18572629:-|5.977422081314459|0.0188810566591458|8.31|63.0|6|2|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3006591796875	2	494.313492	986.612431	-1.6335	-0.00080746	0.71512	0.00035349	-0.91837	-0.00045396	494.31368761453734	97.242	0.24635	97.444	97.312	97.558	0.20207					10	5	3	0	0	0	0.20789	1	9992	9992		23.042	0	1	286950			30940	11	20455	20465	35327	35327					0.11858906374050093
LLKLVFELS	9	Unmodified	_LLKLVFELS_					0	0	0			REV__chr8:47971189-47971341|51|12.25|0.39|4.97|+|ENST00000648554|MCM4,MCM4	REV__chr8:47971189-47971341|51|12.25|0.39|4.97|+|ENST00000648554|MCM4,MCM4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3329467773438	2	531.333893	1060.65323	0.60185	0.00031978	-0.57578	-0.00030593	0.026065	1.3849E-05	531.3334748981565	77.492	1.9296	77.897	77.547	79.477	0.40531					108	45	4	0	0	0	0.55097	1	8789	8789		49.442	0	1	5041200	+		30941	15922	20456	20466	35328	35328					0.12533247693659177
LLKLYGLLL	9	Unmodified	_LLKLYGLLL_					0	0	0			REV__ENSG00000101407|ENST00000373447|TTI1	REV__ENSG00000101407|ENST00000373447|TTI1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3035278320312	2	523.354628	1044.6947	-0.1754	-9.1797E-05	3.1866	0.0016677	3.0112	0.0015759	523.3557653927227	88.373	0.19657	88.58	88.47	88.667	0.2073					6	4	2	0	0	0	0.20789	1	8765	8765		25.45	0	1	29510	+		30942	17277	20457	20467	35329	35329					0.17414428453002984
LLKMLKLHLIL	11	Unmodified	_LLKMLKLHLIL_					0	0	0			REV__ENST00000575041.5_1_16:11864830-11868126:-|nuORF	REV__ENST00000575041.5_1_16:11864830-11868126:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.6360168457031	3	445.636721	1333.88834	-0.08769	-3.9078E-05	-1.7533	-0.00078134	-1.841	-0.00082042	445.6358753524641	36.614	1.1516	36.896	36.681	37.833	0.28173					135	27	6	0	0	0	0.84494	1	2936	2936		6.3209	0.31984	1	11171000	+		30943	28981	20458	20468	35330	35330					0.2347464189758739
LLKMNFTGGDT	11	Unmodified	_LLKMNFTGGDT_					0	0	0		ENSG00000197081|ENST00000356956|IGF2R	ENSG00000197081|ENST00000356956|IGF2R	ENSG00000197081|ENST00000356956|IGF2R	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.84228515625	2	598.802631	1195.59071	-0.58619	-0.00035101	1.6793	0.0010055	1.0931	0.00065453	598.8020886917964	48.075	0.31929	48.544	48.308	48.628	0.46941					12	7	2	0	0	0	0.17551	1	4625	4625		37.812	1.3648	1	192930			30944	8132	20459	20469	35331	35331					0.0007373356315838464
LLKMTSRRLE	10	Unmodified	_LLKMTSRRLE_					0	0	0		nc|ENSG00000157423|Q4G0P3-10|HYDIN;nc|ENSG00000157423|Q4G0P3-8|HYDIN	nc|ENSG00000157423|Q4G0P3-10|HYDIN	nc|ENSG00000157423|Q4G0P3-10|HYDIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	623.8709716796875	2	623.86864	1245.72273	-0.25925	-0.00016174	3.0799	0.0019214	2.8206	0.0017597	623.8704556455313	104.73	1.8693	104.71	104.28	106.15	-0.014809					121	44	4	0	0	0	0.86047	1	11304	11304		23.523	0.94304	1	1315900			30945	15022	20460	20470	35332	35332					0.10969383370775176
LLKNINQP	8	Unmodified	_LLKNINQP_					0	0	0			REV__nc|ENSG00000006125|P63010-3|AP2B1	REV__nc|ENSG00000006125|P63010-3|AP2B1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.2688293457031	2	470.284734	938.554916	-1.2244	-0.0005758	3.9926	0.0018777	2.7683	0.0013019	470.2865558626191	92.337	0.59749	92.799	92.573	93.17	0.46249					19	13	2	0	0	0	0.4196	1	11005	11005		12.207	0	1	197410	+		30946	16098	20461	20471	35333	35333					0.08318064168474848
LLKNINQPN	9	Unmodified	_LLKNINQPN_					0	0	0			REV__nc|ENSG00000006125|P63010-3|AP2B1	REV__nc|ENSG00000006125|P63010-3|AP2B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.305419921875	2	527.306198	1052.59784	-0.62415	-0.00032912	-2.1989	-0.0011595	-2.8231	-0.0014886	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.74721	1	10137	10137		37.159	6.6555	1	949980	+		30947	16098	20462	20472	35334	35334					0.07364834225904815
LLKNLPAM	8	Unmodified	_LLKNLPAM_					0	0	0			REV__ENSG00000187775|ENST00000389840|DNAH17	REV__ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.27410888671875	2	450.272781	898.531009	0.68453	0.00030823	2.8538	0.001285	3.5383	0.0015932	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.82464	1	9663	9663		21.702	0.7554	1	41438000	+		30948	22946	20463	20473	35335	35335					0.07768507410446546
LLKNPLYVEK	10	Unmodified	_LLKNPLYVEK_					0	0	0		ENSG00000150712|ENST00000382142|MTMR12	ENSG00000150712|ENST00000382142|MTMR12	ENSG00000150712|ENST00000382142|MTMR12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.9186096191406	3	406.24818	1215.72271	3.1409	0.001276	-0.55118	-0.00022392	2.5897	0.0010521	406.24731251758544	112.95	0.35545	112.98	112.85	113.21	0.030602					32	16	3	0	0	0	0.85285	1	13668	13668		16.717	1.3843	1	70867			30949	5080	20464	20474	35336	35336					0.12347706642390222
LLKPASLVLPL	11	Unmodified	_LLKPASLVLPL_					0	0	0		ENST00000484676.1_1_1:6687887-6688316:+|nuORF	ENST00000484676.1_1_1:6687887-6688316:+|nuORF	ENST00000484676.1_1_1:6687887-6688316:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3534545898438	2	582.391742	1162.76893	0.88314	0.00051433	2.4271	0.0014135	3.3102	0.0019279	582.3946325404123	103.29	0.26742	103.42	103.21	103.48	0.12622					14	6	3	0	0	0	0.17643	1	10894	10894		14.137	3.8719	1	362780			30950	12542	20465	20475	35337	35337					0.19405771544506933
LLKPEPRIAAM	11	Unmodified	_LLKPEPRIAAM_					0	0	0			REV__ENSG00000172985|ENST00000309415|SH3RF3	REV__ENSG00000172985|ENST00000309415|SH3RF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8694458007812	2	619.868108	1237.72166	-0.18236	-0.00011304	2.4987	0.0015488	2.3163	0.0014358	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.7434	1	9700	9700		23.523	1.5628	1	2627900	+		30951	21874	20466	20476	35338	35338					0.11231169001871422
LLKPHHLLNW	10	Unmodified	_LLKPHHLLNW_					0	0	0			REV__nc|ENSG00000078269|O15056-2|SYNJ2;REV__ENST00000367112.1_2_6:158500311-158517393:+|nuORF	REV__nc|ENSG00000078269|O15056-2|SYNJ2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8826293945312	2	635.874582	1269.73461	1.5101	0.00096024	0.4745	0.00030172	1.9846	0.001262	635.874657629869	112.19	0.13773	112.3	112.2	112.34	0.10638					6	4	2	0	0	0	0.37624	1	12075	12075		9.7057	5.7204	1	594700	+		30952	16761;25549	20467	20477	35339	35339					0.1105336817627176
LLKPHHLLNW	10	Unmodified	_LLKPHHLLNW_					0	0	0			REV__nc|ENSG00000078269|O15056-2|SYNJ2;REV__ENST00000367112.1_2_6:158500311-158517393:+|nuORF	REV__nc|ENSG00000078269|O15056-2|SYNJ2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	635.874582	1269.73461	0.93503	0.00059456	-4.3033	-0.0027364	-3.3683	-0.0021418	635.8739399135853	112.19	0.17119	112.25	112.14	112.31	0.066032	-0.024198	-0.00034843	NaN	9.7057	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29392	+		30953	16761;25549	20467	20477							0.1105336817627176
LLKPTAVP	8	Unmodified	_LLKPTAVP_					0	0	0		ENSG00000176946|ENST00000407315|THAP4	ENSG00000176946|ENST00000407315|THAP4	ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7746276855469	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.884	1	3449	3449		33.516	0	1	11423000			30954	7106	20468	20478	35340	35340					0.10712464770847419
LLKPVQRILK	10	Unmodified	_LLKPVQRILK_					0	0	0		ENSG00000090924|ENST00000425673|PLEKHG2;nc|ENSG00000090924|Q9H7P9-3|PLEKHG2;nc|ENSG00000090924|Q9H7P9-2|PLEKHG2;ENSG00000120278|ENST00000696526|PLEKHG1;nc|ENSG00000126822|A1L390-3|PLEKHG3;ENSG00000126822|ENST00000247226|PLEKHG3;ENST00000490180.2_1_14:65197520-65198405:+|nuORF	ENSG00000090924|ENST00000425673|PLEKHG2;ENSG00000120278|ENST00000696526|PLEKHG1;nc|ENSG00000126822|A1L390-3|PLEKHG3;ENST00000490180.2_1_14:65197520-65198405:+|nuORF	ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.366455078125	2	604.416083	1206.81761	-0.16833	-0.00010174	-1.4966	-0.00090455	-1.6649	-0.0010063	604.4153925872675	104.95	0.32762	104.95	104.7	105.03	0					18	7	3	0	0	0	0.37624	1	10819	10819		20.947	13.257	1	110390			30955	1660;3122;3473;12665	20469	20479	35341	35341					0.22247684904255038
LLKQIFISGG	10	Unmodified	_LLKQIFISGG_					0	0	0		ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326904296875	2	538.329142	1074.64373	-1.4901	-0.00080219	-2.8806	-0.0015507	-4.3708	-0.0023529	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.86763	1	10773	10773		26.693	2.4902	1	93615000			30956	2844	20470	20480	35342	35342					0.10939479408125408
LLKQLFHLVV	10	Unmodified	_LLKQLFHLVV_					0	0	0			REV__ENSG00000113396|ENST00000262462|SLC27A6	REV__ENSG00000113396|ENST00000262462|SLC27A6	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.93023681640625	3	403.928781	1208.76451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.524	1	47.436	46.936	47.936	-0.087646								0	0	0	0.45132	1	3560	3560		16.717	5.6206	1		+		30957	17994	20471	20481	35343	35343					0.16848307121563266
LLKQQLLTND	10	Unmodified	_LLKQQLLTND_					0	0	0			REV__nc|ENSG00000165125|Q9H1D0-2|TRPV6	REV__nc|ENSG00000165125|Q9H1D0-2|TRPV6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.3442993164062	2	593.34552	1184.67649	0.89398	0.00053044	-2.6243	-0.0015571	-1.7303	-0.0010267	593.3438403936742	103.36	2.3929	103.49	103.05	105.45	0.12621					170	59	5	0	0	0	0.8545	1	10945	10945		36.447	1.2947	1	4092800	+		30958	21152	20472	20482	35344	35344					0.09153641740317653
LLKQTHIAP	9	Unmodified	_LLKQTHIAP_					0	0	0		ENSG00000101544|ENST00000262198|ADNP2	ENSG00000101544|ENST00000262198|ADNP2	ENSG00000101544|ENST00000262198|ADNP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.8157043457031	2	510.813659	1019.61277	0.62483	0.00031917	-1.7816	-0.00091006	-1.1568	-0.00059089	510.8124954231215	79.936	0.58498	80.077	79.725	80.31	0.14117					45	27	2	0	0	0	0.76996	1	7604	7604		33.516	0.70317	1	97467			30959	1948	20473	20483	35345	35345					0.10374326093904074
LLKQTRPVQ	9	Unmodified	_LLKQTRPVQ_					0	0	0		ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1;nc|ENSG00000111530|Q86VP6-3|CAND1	ENSG00000111530|ENST00000545606|CAND1	ENSG00000111530|ENST00000545606|CAND1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.8373413085938	2	541.837665	1081.66078	0.022744	1.2324E-05	0.836	0.00045297	0.85874	0.0004653	541.8375708786058	35.971	1.1022	36.222	35.634	36.736	0.25101					76	27	4	0	0	0	0.14236	1	2823	2823		85.161	8.3142	1	2361700			30960	2583	20474	20484	35346	35346					0.12321400013956918
LLKQTRPVQ	9	Unmodified	_LLKQTRPVQ_					0	0	0		ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1;nc|ENSG00000111530|Q86VP6-3|CAND1	ENSG00000111530|ENST00000545606|CAND1	ENSG00000111530|ENST00000545606|CAND1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.8377685546875	2	541.837665	1081.66078	1.1193	0.00060646	-0.035632	-1.9307E-05	1.0836	0.00058715	541.8370205306147	35.873	1.1831	36.314	35.769	36.952	0.44043					76	29	4	0	0	0	0.07589	1	2800	2800		98.629	16.389	1	2738500			30961	2583	20474	20484	35347	35347					0.12321400013956918
LLKQYFKLTK	10	Unmodified	_LLKQYFKLTK_					0	0	0			REV__ENSG00000171798|ENST00000304613|KNDC1	REV__ENSG00000171798|ENST00000304613|KNDC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3024597167969	3	427.935825	1280.78564	0.44121	0.00018881	-3.6909	-0.0015795	-3.2497	-0.0013906	428.26903262178274	63.44	0.44827	63.995	63.641	64.089	0.55449					12	10	2	0	0	0	0.37624	1	6823	6823		16.007	4.0744	1	31602	+		30962	21768	20475	20485	35348	35348					0.15648272430439647
LLKRHLIEW	9	Unmodified	_LLKRHLIEW_					0	0	0			REV__ENSG00000079387|ENST00000549518|SENP1	REV__ENSG00000079387|ENST00000549518|SENP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3671264648438	2	604.369133	1206.72371	-0.16845	-0.00010181	-3.3745	-0.0020395	-3.543	-0.0021413	604.3669303033663	107.81	0.85171	107.81	107.02	107.87	0					52	20	4	0	0	0	0.7932	1	11183	11183		25.45	2.8705	1	11686000	+		30963	16783	20476	20486	35349	35349					0.12861965801994302
LLKRIKIKQL	10	Unmodified	_LLKRIKIKQL_					0	0	0		MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|222|3|anti-sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|222|3|anti-sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|222|3|anti-sense	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2976379394531	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.286	1	77.692	77.192	78.192	0.40531								0	0	0	0.45132	1	8790	8790		4.0829	0	1				30964	14711	20477	20487	35350	35350					0.25959946829675573
LLKRKPEKPTN	11	Unmodified	_LLKRKPEKPTN_					0	0	0		ENST00000410111.7_1_2:86371938-86373232:-|nuORF	ENST00000410111.7_1_2:86371938-86373232:-|nuORF	ENST00000410111.7_1_2:86371938-86373232:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2733459472656	3	441.94175	1322.80342	-0.49593	-0.00021917	-3.6821	-0.0016273	-4.1781	-0.0018465	441.9399207304678	55.239	1.1399	55.213	54.702	55.842	-0.026581					95	31	4	0	0	0	0.75121	1	4982	4982		21.78	3.2494	1	363460			30965	11323	20478	20488	35351	35351					0.15492987685342996
LLKRKPEKPTN	11	Unmodified	_LLKRKPEKPTN_					0	0	0		ENST00000410111.7_1_2:86371938-86373232:-|nuORF	ENST00000410111.7_1_2:86371938-86373232:-|nuORF	ENST00000410111.7_1_2:86371938-86373232:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.93865966796875	3	441.94175	1322.80342	-1.4755	-0.00065207	-2.8855	-0.0012752	-4.3609	-0.0019273	441.9403125343586	55.224	1.199	55.287	54.704	55.903	0.063725					106	39	3	0	0	0	0.73647	1	4558	4558		25.068	4.2306	1	485540			30966	11323	20478	20488	35352	35352					0.15492987685342996
LLKRKRFYLTK	11	Unmodified	_LLKRKRFYLTK_					0	0	0			REV__ENST00000391974.3_1_1:198190099-198190180:+|nuORF	REV__ENST00000391974.3_1_1:198190099-198190180:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.93804931640625	3	489.317039	1464.92929	0.23293	0.00011398	2.8464	0.0013928	3.0793	0.0015068	489.31840999368586	17.114	0.61783	16.632	16.373	16.991	-0.48256					16	13	2	0	0	0	0.18068	1	210	210		15.921	12.512	1	48245	+		30967	26009	20479	20489	35353	35353					0.2154211926140306
LLKRKRFYLTK	11	Unmodified	_LLKRKRFYLTK_					0	0	0			REV__ENST00000391974.3_1_1:198190099-198190180:+|nuORF	REV__ENST00000391974.3_1_1:198190099-198190180:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.6285400390625	3	489.317039	1464.92929	0.16211	7.9325E-05	2.7224	0.0013321	2.8845	0.0014114	489.3182853324137	17.156	0.49603	16.545	16.348	16.844	-0.6107					15	10	2	0	0	0	0.17996	1	210	210		17.167	5.2344	1	51944	+		30968	26009	20479	20489	35354	35354					0.2154211926140306
LLKRLLRHVS	10	Unmodified	_LLKRLLRHVS_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.23809814453125	3	412.275063	1233.80336	2.4461	0.0010085	-3.9403	-0.0016245	-1.4941	-0.000616	412.27355985184823	78.082	0.091278	78.132	78.084	78.175	0.04969					6	3	2	0	0	0	0.37624	1	7659	7659		7.3997	0.38104	1	24177	+		30969	23324	20480	20490	35355	35355					0.19581032476003202
LLKRLPRK	8	Unmodified	_LLKRLPRK_					0	0	0			REV__ENSG00000141639|ENST00000400384|MAPK4	REV__ENSG00000141639|ENST00000400384|MAPK4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.3604736328125	2	512.361111	1022.70767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.786	1	74.872	74.372	75.372	0.085907								0	0	0	0.30252	1	6899	6899		19.36	0	1		+		30970	19704	20481	20491	35356	35356					0.1972230435574147
LLKRLPVLPI	10	Unmodified	_LLKRLPVLPI_					0	0	0			REV__ENSG00000185112|ENST00000329759|FAM43A	REV__ENSG00000185112|ENST00000329759|FAM43A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.9068603515625	2	581.407727	1160.8009	0.88211	0.00051286	-4.1601	-0.0024187	-3.278	-0.0019058	581.4051889968249	108.93	0.52326	109.01	108.72	109.24	0.078552					47	23	3	0	0	0	0.88106	1	11730	11730		12.207	1.3413	1	2018000	+		30971	22738	20482	20492	35357	35357					0.2269318401831697
LLKRNRGAWDG	11	Unmodified	_LLKRNRGAWDG_					0	0	0			REV__ENSG00000106479|ENST00000223210|ZNF862	REV__ENSG00000106479|ENST00000223210|ZNF862	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.3692016601562	2	643.359828	1284.7051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.15	1	115.16	114.66	115.66	0.0094528								0	0	0	0.56276	1	13881	13881		24.519	0.99649	1		+		30972	17615	20483	20493	35358	35358					0.07413804160114523
LLKRQQRMIKN	11	Unmodified	_LLKRQQRMIKN_					0	0	0		ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B;ENST00000475705.1_1_6:32086681-32087735:-|nuORF	ENSG00000213676|ENST00000375203|ATF6B	ENSG00000213676|ENST00000375203|ATF6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62384033203125	3	476.625767	1426.85547	-1.6911	-0.000806	-2.6356	-0.0012562	-4.3267	-0.0020622	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.7896	1	12149	12149		13.508	0.55046	1	2577100			30973	8600	20484	20494	35359	35359					0.15911827827449088
LLKRRPYGRNK	11	Unmodified	_LLKRRPYGRNK_					0	0	0		nc|ENSG00000058668|P23634-5|ATP2B4;nc|ENSG00000058668|P23634-4|ATP2B4;nc|ENSG00000058668|P23634-3|ATP2B4;nc|ENSG00000058668|P23634-2|ATP2B4;nc|ENSG00000058668|P23634-7|ATP2B4;ENSG00000058668|ENST00000357681|ATP2B4;nc|ENSG00000058668|P23634-8|ATP2B4;nc|ENSG00000058668|P23634|ATP2B4	nc|ENSG00000058668|P23634-5|ATP2B4	nc|ENSG00000058668|P23634-5|ATP2B4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.24481201171875	3	467.624755	1399.85244	-0.97592	-0.00045636	-0.77892	-0.00036424	-1.7548	-0.0008206	467.62424002855863	104.82	1.5579	104.99	104.65	106.21	0.17095					67	39	4	0	0	0	0.17911	1	11294	11294		9.2118	0	1	228610			30974	1045	20485	20495	35360	35360					0.16850320764933713
LLKRSQDVLH	10	Unmodified	_LLKRSQDVLH_					0	0	0		nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;nc|ENSG00000061987|Q7Z3U7-5|MON2;ENSG00000061987|ENST00000393630|MON2;nc|ENSG00000061987|Q7Z3U7-3|MON2;ENST00000551307.5_1_12:62954224-62986526:+|nuORF;ENST00000546751.1_1_12:62974148-62979324:+|nuORF	nc|ENSG00000061987|Q7Z3U7-2|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5747375488281	3	403.575178	1207.70371	-1.8238	-0.00073605	0.70537	0.00028467	-1.1185	-0.00045138	403.575388315242	82.768	3.2423	82.923	82.261	85.503	0.15474					165	75	3	0	0	0	0.86106	1	8034	8034		33.922	3.3528	1	1511600			30975	1080	20486	20496	35361	35361					0.10816170071370834
LLKRSQDVLH	10	Unmodified	_LLKRSQDVLH_					0	0	0		nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;nc|ENSG00000061987|Q7Z3U7-5|MON2;ENSG00000061987|ENST00000393630|MON2;nc|ENSG00000061987|Q7Z3U7-3|MON2;ENST00000551307.5_1_12:62954224-62986526:+|nuORF;ENST00000546751.1_1_12:62974148-62979324:+|nuORF	nc|ENSG00000061987|Q7Z3U7-2|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5749206542969	3	403.575178	1207.70371	0.97828	0.00039481	-1.9734	-0.0007964	-0.99509	-0.00040159	403.5743581781147	80.189	0.84587	80.605	80.082	80.928	0.41621					61	19	4	0	0	0	0.8545	1	9155	9155		36.447	3.6962	1	3876600			30976	1080	20486	20496	35362	35362					0.10816170071370834
LLKRSQDVLH	10	Unmodified	_LLKRSQDVLH_					0	0	0		nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;nc|ENSG00000061987|Q7Z3U7-5|MON2;ENSG00000061987|ENST00000393630|MON2;nc|ENSG00000061987|Q7Z3U7-3|MON2;ENST00000551307.5_1_12:62954224-62986526:+|nuORF;ENST00000546751.1_1_12:62974148-62979324:+|nuORF	nc|ENSG00000061987|Q7Z3U7-2|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747985839844	3	403.575178	1207.70371	-0.18431	-7.4383E-05	-0.84021	-0.00033909	-1.0245	-0.00041347	403.57480385646164	80.099	0.84451	80.626	80.105	80.949	0.52676					63	19	4	0	0	0	0.86802	1	9181	9181		27.047	0.98393	1	4093300			30977	1080	20486	20496	35363	35363					0.10816170071370834
LLKRSQDVLHR	11	Unmodified	_LLKRSQDVLHR_					0	0	0		nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;nc|ENSG00000061987|Q7Z3U7-5|MON2;ENSG00000061987|ENST00000393630|MON2;nc|ENSG00000061987|Q7Z3U7-3|MON2;ENST00000551307.5_1_12:62954224-62986526:+|nuORF;ENST00000546751.1_1_12:62974148-62979324:+|nuORF	nc|ENSG00000061987|Q7Z3U7-2|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.6085205078125	3	455.608882	1363.80482	0.49166	0.00022401	-1.6077	-0.0007325	-1.1161	-0.0005085	455.608083696801	71.141	2.3916	71.271	70.4	72.791	0.12965					199	101	2	0	0	0	0.71803	1	6605	6605		28.577	4.3008	1	552710			30978	1080	20487	20497	35364	35364					0.13746621774066625
LLKRWSLRHIL	11	Unmodified	_LLKRWSLRHIL_					0	0	0			REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97442626953125	3	478.973384	1433.89832	-0.91417	-0.00043786	2.5827	0.001237	1.6685	0.00079918	478.9746832148069	43.078	1.9449	43.084	42.148	44.093	0.0057487					98	52	3	0	0	0	0.80813	1	2986	2986		9.6461	0	1	330000	+		30979	25689	20488	20498	35365	35365					0.19872965947160992
LLKRWSLRHIL	11	Unmodified	_LLKRWSLRHIL_					0	0	0			REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9740905761719	3	478.973384	1433.89832	-0.90815	-0.00043498	3.264	0.0015634	2.3558	0.0011284	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.79224	1	3461	3461		12.957	1.0251	1	368580	+		30980	25689	20488	20498	35366	35366					0.19872965947160992
LLKRWSLRHIL	11	Unmodified	_LLKRWSLRHIL_					0	0	0			REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9744873046875	3	478.973384	1433.89832	0.32204	0.00015425	2.3016	0.0011024	2.6237	0.0012567	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.78085	1	3929	3929		15.333	1.0899	1	307830	+		30981	25689	20488	20498	35367	35367					0.19872965947160992
LLKRWSLRHIL	11	Unmodified	_LLKRWSLRHIL_					0	0	0			REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97479248046875	3	478.973384	1433.89832	0.78236	0.00037473	1.61	0.00077113	2.3923	0.0011459	478.97403979607725	107.65	0.46375	107.74	107.42	107.88	0.091255					41	10	5	0	0	0	0.7896	1	11569	11569		13.508	3.404	1	2303300	+		30982	25689	20488	20498	35368	35368					0.19872965947160992
LLKRWSLRHIL	11	Unmodified	_LLKRWSLRHIL_					0	0	0			REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27728271484375	3	478.973384	1433.89832	0.63421	0.00030377	-0.76554	-0.00036667	-0.13134	-6.2907E-05	479.3070779190475	84.313	0.34474	84.461	84.302	84.646	0.14794					10	7	2	0	0	0	0.17911	1	8222	8222		13.508	3.8618	1	91492	+		30983	25689	20488	20498	35369	35369					0.19872965947160992
LLKRWSLRHIL	11	Unmodified	_LLKRWSLRHIL_					0	0	0			REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97515869140625	3	478.973384	1433.89832	-0.315	-0.00015088	2.7524	0.0013183	2.4374	0.0011675	478.9746652956354	49.514	1.8124	49.42	48.44	50.252	-0.093178					109	43	3	0	0	0	0.79476	1	3867	3867		12.433	0.50046	1	294110	+		30984	25689	20488	20498	35370	35370					0.19872965947160992
LLKRWSLRHIL	11	Unmodified	_LLKRWSLRHIL_					0	0	0			REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	478.973384	1433.89832	-0.80785	-0.00038694	2.9957	0.0014349	2.1879	0.0010479	478.974804306888	107.51	0.64582	107.65	107.32	107.96	0.13867	-0.040478	3.7424E-05	NaN	13.508	50	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1195900	+		30985	25689	20488	20498							0.19872965947160992
LLKRWSLRHIL	11	Unmodified	_LLKRWSLRHIL_					0	0	0			REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	478.973384	1433.89832	0.78236	0.00037473	1.61	0.00077113	2.3923	0.0011459	478.97403979607725	107.65	0.46375	107.74	107.42	107.88	0.091255	0.047602	-0.0019538	NaN	13.508	41	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2303300	+		30986	25689	20488	20498							0.19872965947160992
LLKRWSLRHIL	11	Unmodified	_LLKRWSLRHIL_					0	0	0			REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	REV__ENST00000371437.4_1_X:119005537-119005681:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	478.973384	1433.89832	-1.6835	-0.00080633	4.3666	0.0020915	2.6831	0.0012851	478.9753656175019	107.65	0.46106	107.68	107.37	107.83	0.036118	-0.0071245	0.0020072	NaN	13.508	30	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	818850	+		30987	25689	20488	20498							0.19872965947160992
LLKRWTSA	8	Unmodified	_LLKRWTSA_					0	0	0		ENST00000358485.8_2_2:202123075-202131285:+|nuORF	ENST00000358485.8_2_2:202123075-202131285:+|nuORF	ENST00000358485.8_2_2:202123075-202131285:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79052734375	2	487.792727	973.5709	-1.4694	-0.00071678	-3.0475	-0.0014866	-4.5169	-0.0022033	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.884	1	8235	8235		33.516	1.5607	1	607090			30988	10411	20489	20499	35371	35371					0.0830577040536582
LLKRWTSA	8	Unmodified	_LLKRWTSA_					0	0	0		ENST00000358485.8_2_2:202123075-202131285:+|nuORF	ENST00000358485.8_2_2:202123075-202131285:+|nuORF	ENST00000358485.8_2_2:202123075-202131285:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7907409667969	2	487.792727	973.5709	-1.5393	-0.00075085	-2.8027	-0.0013671	-4.342	-0.002118	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.86791	1	8248	8248		28.254	0	1	1760400			30989	10411	20489	20499	35372	35372					0.0830577040536582
LLKSEPQAA	9	Unmodified	_LLKSEPQAA_					0	0	0		ENST00000366711.3_1_1:228364011-228364131:+|nuORF	ENST00000366711.3_1_1:228364011-228364131:+|nuORF	ENST00000366711.3_1_1:228364011-228364131:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.77484130859375	2	478.7742	955.533846	0.0075193	3.6E-06	3.9588	0.0018954	3.9663	0.001899	478.77599155487246	33.885	0.50275	33.88	33.628	34.13	-0.0047417					17	11	2	0	0	0	0.55097	1	1999	1999		49.442	10.189	1	39373			30990	10516	20490	20500	35373	35373					0.054300540689382615
LLKSEPQAA	9	Unmodified	_LLKSEPQAA_					0	0	0		ENST00000366711.3_1_1:228364011-228364131:+|nuORF	ENST00000366711.3_1_1:228364011-228364131:+|nuORF	ENST00000366711.3_1_1:228364011-228364131:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	478.7742	955.533846	-1.7942	-0.00085902	5.9933	0.0028694	4.1991	0.0020104	478.7768470621651	33.865	0.79945	33.868	33.628	34.427	0.0026054	0.052663	0.0014894	NaN	49.442	29	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50008			30991	10516	20490	20500							0.054300540689382615
LLKSEPQAA	9	Unmodified	_LLKSEPQAA_					0	0	0		ENST00000366711.3_1_1:228364011-228364131:+|nuORF	ENST00000366711.3_1_1:228364011-228364131:+|nuORF	ENST00000366711.3_1_1:228364011-228364131:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	478.7742	955.533846	0.17609	8.4305E-05	2.9906	0.0014318	3.1667	0.0015161	478.77569770815734	33.574	0.37767	33.684	33.466	33.844	0.10991	-0.13141	-0.0013857	NaN	49.442	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57316			30992	10516	20490	20500							0.054300540689382615
LLKSEPQAA	9	Unmodified	_LLKSEPQAA_					0	0	0		ENST00000366711.3_1_1:228364011-228364131:+|nuORF	ENST00000366711.3_1_1:228364011-228364131:+|nuORF	ENST00000366711.3_1_1:228364011-228364131:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	478.7742	955.533846	0.24572	0.00011765	5.2855	0.0025305	5.5312	0.0026482	478.77649035258986	33.723	0.35073	33.677	33.57	33.92	-0.045815	-0.13791	0.0008117	NaN	49.442	17	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54003			30993	10516	20490	20500							0.054300540689382615
LLKSIRALLKP	11	Unmodified	_LLKSIRALLKP_					0	0	0			REV__ENSG00000131379|ENST00000253697|C3orf20	REV__ENSG00000131379|ENST00000253697|C3orf20	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3793334960938	2	626.42919	1250.84383	1.3719	0.00085942	-1.2866	-0.00080597	0.085325	5.345E-05	626.4280469890839	105.73	0.34589	105.89	105.66	106	0.15925					14	8	2	0	0	0	0.17868	1	11268	11268		9.7057	2.9701	1	175490	+		30994	18948	20491	20501	35374	35374					0.22843954075733564
LLKSKLAHVAH	11	Unmodified	_LLKSKLAHVAH_					0	0	0		ENST00000462559.1_1_3:183013976-183014306:+|nuORF	ENST00000462559.1_1_3:183013976-183014306:+|nuORF	ENST00000462559.1_1_3:183013976-183014306:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.8823852539062	2	608.879865	1215.74518	2.454	0.0014942	3.046	0.0018547	5.5	0.0033489	608.8814654512512	107.75	0.26207	107.85	107.67	107.93	0.10396					21	9	3	0	0	0	0.74763	1	13134	13134		22.58	2.5829	1	6016400			30995	12044	20492	20502	35375	35375					0.14593350830705276
LLKSLEVNH	9	Unmodified	_LLKSLEVNH_					0	0	0			REV__ENSG00000164100|ENST00000296499|NDST3	REV__ENSG00000164100|ENST00000296499|NDST3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.81005859375	2	526.808574	1051.60259	-0.10527	-5.5459E-05	-1.3143	-0.0006924	-1.4196	-0.00074786	526.8075985378076	98.641	0.66186	98.868	98.39	99.052	0.2269					35	14	3	0	0	0	0.72402	1	10213	10213		38.806	0.99462	1	911130	+		30996	21031	20493	20503	35376	35376					0.07885718368675043
LLKSPLAAPR	10	Unmodified	_LLKSPLAAPR_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3402099609375	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.85466	1	10527	10527		20.947	1.8434	1	2530900			30997	1611	20494	20504	35377	35377					0.14086588019290502
LLKSPLAAPR	10	Unmodified	_LLKSPLAAPR_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.3401489257812	2	533.342584	1064.67061	-1.5064	-0.00080343	-2.9287	-0.001562	-4.4351	-0.0023654	533.3409139496441	99.132	2.1048	99.317	98.763	100.87	0.18582					141	48	4	0	0	0	0.85466	1	10262	10262		20.947	4.4738	1	1837700			30998	1611	20494	20504	35378	35378					0.14086588019290502
LLKSRKCF	8	Unmodified	_LLKSRKCF_					0	0	0		ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10	ENSG00000086827|ENST00000200135|ZW10	ENSG00000086827|ENST00000200135|ZW10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.79583740234375	2	497.796955	993.579357	-0.62466	-0.00031096	-1.5248	-0.00075906	-2.1495	-0.00107	497.7959443257759	48.896	1.0734	48.921	48.637	49.71	0.025574					60	26	3	0	0	0	0.8347	1	3778	3778		23.042	1.3402	1	414050			30999	1561	20495	20505	35379	35379					0.08231001050342002
LLKSSKISVTY	11	Unmodified	_LLKSSKISVTY_					0	0	0			REV__nc|ENSG00000197121|Q75T13-2|PGAP1	REV__nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8685302734375	2	619.871371	1237.72819	0.5439	0.00033715	-3.7831	-0.002345	-3.2392	-0.0020079	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.66009	1	11247	11247		37.508	10.815	1	1280900	+		31000	23199	20496	20506	35380	35380					0.11883385434248339
LLKSSLTNR	9	Unmodified	_LLKSSLTNR_					0	0	0		ENST00000417956.6_1_10:11367879-11367930:+|nuORF	ENST00000417956.6_1_10:11367879-11367930:+|nuORF	ENST00000417956.6_1_10:11367879-11367930:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3141479492188	2	516.314023	1030.61349	-1.5618	-0.0008064	1.5892	0.00082053	0.027358	1.4125E-05	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.78983	1	10727	10727		27.882	3.6795	1	1268100			31001	11417	20497	20507	35381	35381					0.09941120742928433
LLKSSPPGRRP	11	Unmodified	_LLKSSPPGRRP_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.24676513671875	3	403.247173	1206.71969	-0.96192	-0.00038789	0.31664	0.00012768	-0.64528	-0.00026021	403.2472281244655	104.88	3.5231	104.88	103.72	107.24	0					230	83	5	0	0	0	0.76699	1	10786	10786		21.78	7.0868	1	5402700			31002	14631	20498	20508	35382	35382					0.12459876308275852
LLKSSPPGRRP	11	Unmodified	_LLKSSPPGRRP_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.36669921875	2	604.367121	1206.71969	-0.16822	-0.00010167	-0.91026	-0.00055013	-1.0785	-0.0006518	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.70737	2	10977	10855;10977		30.318	1.1477	1	47715000			31003	14631	20498	20508	35383;35384	35384					0.12459876308275852
LLKSSPPGRRP	11	Unmodified	_LLKSSPPGRRP_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.246826171875	3	403.247173	1206.71969	-0.18602	-7.5014E-05	-0.48244	-0.00019454	-0.66847	-0.00026956	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.7342	1	11405	11405		22.562	6.0317	1	12308000			31004	14631	20498	20508	35385	35385					0.12459876308275852
LLKSSPPGRRP	11	Unmodified	_LLKSSPPGRRP_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3667602539062	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.67778	1	11454	11454		35.152	7.2698	1	63350000			31005	14631	20498	20508	35386	35386					0.12459876308275852
LLKSSPPGRRP	11	Unmodified	_LLKSSPPGRRP_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3661499023438	2	604.367121	1206.71969	3.2045	0.0019367	-4.3338	-0.0026192	-1.1294	-0.00068255	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.7144	1	11787	11787		29.17	7.2102	1	63446000			31006	14631	20498	20508	35387	35387					0.12459876308275852
LLKSSPPGRRP	11	Unmodified	_LLKSSPPGRRP_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.246826171875	3	403.247173	1206.71969	-1.7912	-0.0007223	1.0466	0.00042203	-0.74462	-0.00030027	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.76322	1	11053	11053		17.167	0.63689	1	20673000			31007	14631	20498	20508	35388	35388					0.12459876308275852
LLKSSPPGRRP	11	Unmodified	_LLKSSPPGRRP_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3665161132812	2	604.367121	1206.71969	1.0484	0.00063359	-2.1061	-0.0012728	-1.0577	-0.00063923	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.7144	1	11192	11192		29.17	0	1	105850000			31008	14631	20498	20508	35389	35389					0.12459876308275852
LLKSSPPGRRP	11	Unmodified	_LLKSSPPGRRP_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3663940429688	2	604.367121	1206.71969	0.90473	0.00054679	-2.0534	-0.001241	-1.1487	-0.00069423	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.61369	2	11194	11170;11194		42.864	3.6248	1	105740000			31009	14631	20498	20508	35390;35391	35391					0.12459876308275852
LLKSSPPGRRP	11	Unmodified	_LLKSSPPGRRP_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3667602539062	2	604.367121	1206.71969	-1.2751	-0.0007706	0.20453	0.00012361	-1.0705	-0.00064699	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.7144	2	11168	11168;11337		29.17	1.2878	1	103250000			31010	14631	20498	20508	35392;35393	35392					0.12459876308275852
LLKSSPPGRRP	11	Unmodified	_LLKSSPPGRRP_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3662719726562	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.67778	1	12743	12743		35.152	12.572	1	5984800			31011	14631	20498	20508	35394	35394					0.12459876308275852
LLKSSPPGRRP	11	Unmodified	_LLKSSPPGRRP_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|99|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3665771484375	2	604.367121	1206.71969	3.6458	0.0022034	-4.4074	-0.0026637	-0.76167	-0.00046033	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.69995	1	12752	12752		31.53	3.4483	1	5883900			31012	14631	20498	20508	35395	35395					0.12459876308275852
LLKSSPVTNLN	11	Unmodified	_LLKSSPVTNLN_					0	0	0			REV__ENSG00000158966|ENST00000651257|CACHD1	REV__ENSG00000158966|ENST00000651257|CACHD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	593.3435668945312	2	593.34552	1184.67649	-0.22642	-0.00013434	-1.2506	-0.00074204	-1.477	-0.00087638	593.3446713104415	103.73	2.3003	103.73	103.29	105.59	0					144	55	4	0	0	0	0.72106	1	10684	10684		28.081	0	1	1751500			31013	20631	20499	20509	35396	35396					0.09153641740317653
LLKSSPVTNLN	11	Unmodified	_LLKSSPVTNLN_					0	0	0			REV__ENSG00000158966|ENST00000651257|CACHD1	REV__ENSG00000158966|ENST00000651257|CACHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	593.3438720703125	2	593.34552	1184.67649	-0.61427	-0.00036447	-1.2195	-0.00072357	-1.8337	-0.001088	593.3447041008176	103.62	2.4136	103.61	103.22	105.64	-0.0035706					155	57	4	0	0	0	0.69248	1	11176	11176		32.751	3.5805	1	2207400			31014	20631	20499	20509	35397	35397					0.09153641740317653
LLKTIGKGN	9	Unmodified	_LLKTIGKGN_					0	0	0		nc|ENSG00000075413|P27448-8|MARK3;ENST00000561071.5_1_14:103871532-103958349:+|nuORF;nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;ENSG00000072518|ENST00000402010|MARK2;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2;ENSG00000075413|ENST00000429436|MARK3;nc|ENSG00000075413|P27448-7|MARK3;ENST00000558223.5_1_14:103852366-103932133:+|nuORF;nc|ENSG00000075413|P27448-2|MARK3;nc|ENSG00000075413|P27448-4|MARK3;nc|ENSG00000075413|P27448-3|MARK3;nc|ENSG00000075413|P27448-6|MARK3	nc|ENSG00000075413|P27448-8|MARK3;nc|ENSG00000072518|Q7KZI7-12|MARK2	nc|ENSG00000072518|Q7KZI7-12|MARK2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2876281738281	2	472.300384	942.586216	0.73021	0.00034488	-1.4895	-0.0007035	-0.75932	-0.00035863	472.29971558763697	95.707	0.29897	95.87	95.763	96.062	0.16316					9	6	2	0	0	0	0.20789	1	9841	9841		19.997	0	1	49601			31015	1278;14779	20500	20510	35398	35398					0.11262637202571568
LLKTLLDIPAN	11	Unmodified	_LLKTLLDIPAN_					0	0	0		nc|ENSG00000070540|Q5MNZ9-2|WIPI1;ENSG00000070540|ENST00000262139|WIPI1;ENST00000586815.1_1_17:66429656-66453562:-|nuORF;ENST00000589459.5_1_17:66423364-66453609:-|nuORF	nc|ENSG00000070540|Q5MNZ9-2|WIPI1	nc|ENSG00000070540|Q5MNZ9-2|WIPI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.8724975585938	2	605.873914	1209.73327	-0.46872	-0.00028398	-2.5451	-0.001542	-3.0138	-0.001826	605.8722201329331	100.48	2.0532	100.52	100	102.06	0.039742					113	47	4	0	0	0	0.72106	1	10690	10690		28.081	6.3957	1	1745000			31016	1245	20501	20511	35399	35399					0.13679689296850484
LLKTLLDIPAN	11	Unmodified	_LLKTLLDIPAN_					0	0	0		nc|ENSG00000070540|Q5MNZ9-2|WIPI1;ENSG00000070540|ENST00000262139|WIPI1;ENST00000586815.1_1_17:66429656-66453562:-|nuORF;ENST00000589459.5_1_17:66423364-66453609:-|nuORF	nc|ENSG00000070540|Q5MNZ9-2|WIPI1	nc|ENSG00000070540|Q5MNZ9-2|WIPI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.8728637695312	2	605.873914	1209.73327	0.90131	0.00054608	-3.8527	-0.0023343	-2.9514	-0.0017882	605.871436730015	100.15	1.5268	100.3	99.851	101.38	0.15073					77	35	3	0	0	0	0.7144	1	10441	10441		29.17	1.0886	1	806450			31017	1245	20501	20511	35400	35400					0.13679689296850484
LLKTSVDAL	9	Unmodified	_LLKTSVDAL_					0	0	0			REV__ENST00000566201.6_1_16:46508202-46534771:-|nuORF	REV__ENST00000566201.6_1_16:46508202-46534771:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2387390136719	2	480.292225	958.569897	0.32202	0.00015467	-0.80646	-0.00038734	-0.48444	-0.00023267	480.2917600940422	52.537	0.53653	52.961	52.723	53.259	0.42348					19	12	2	0	0	0	0.20789	1	5250	5250		21.96	0	1	412810	+		31018	28864	20502	20512	35401	35401					0.08895511245793841
LLKTTGIV	8	Unmodified	_LLKTTGIV_					0	0	0			REV__ENSG00000162104|ENST00000294016|ADCY9	REV__ENSG00000162104|ENST00000294016|ADCY9	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.779296875	2	422.778754	843.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.201	1	16.118	15.618	16.618	-0.083363								0	0	0	0.29568	1	118	118		35.201	0	1		+		31019	20795	20503	20513	35402	35402					0.11492447425280261
LLKTYWMQY	9	Unmodified	_LLKTYWMQY_					0	0	0		ENST00000487777.5_1_2:207651488-207651551:+|nuORF	ENST00000487777.5_1_2:207651488-207651551:+|nuORF	ENST00000487777.5_1_2:207651488-207651551:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.8250732421875	2	623.32046	1244.62637	-0.74016	-0.00046135	3.5896	0.0022375	2.8494	0.0017761	623.3225358169732	57.039	0.54884	57.039	56.823	57.372	0					53	23	3	0	0	0	0.19953	2	4903	4896;4903		73.975	11.867	1	309880			31020	12606	20504	20514	35403;35404	35404					0.013838158108228527
LLKTYWMQY	9	Unmodified	_LLKTYWMQY_					0	0	0		ENST00000487777.5_1_2:207651488-207651551:+|nuORF	ENST00000487777.5_1_2:207651488-207651551:+|nuORF	ENST00000487777.5_1_2:207651488-207651551:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	623.32046	1244.62637	1.2452	0.00077617	1.0453	0.00065158	2.2906	0.0014277	623.3214535171958	57.111	0.3516	57.184	57.019	57.371	0.073013	0.071167	-0.0027779	NaN	73.975	21	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176870			31021	12606	20504	20514							0.013838158108228527
LLKTYWMQY	9	Unmodified	_LLKTYWMQY_					0	0	0		ENST00000487777.5_1_2:207651488-207651551:+|nuORF	ENST00000487777.5_1_2:207651488-207651551:+|nuORF	ENST00000487777.5_1_2:207651488-207651551:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	623.32046	1244.62637	-0.11291	-7.0381E-05	2.7958	0.0017427	2.6829	0.0016723	623.3218612962977	57.127	0.32031	57.101	56.817	57.137	-0.026108	-0.011876	-0.00059567	NaN	73.975	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135290			31022	12606	20504	20514							0.013838158108228527
LLKVKDSQTPT	11	Unmodified	_LLKVKDSQTPT_					0	0	0		nc|ENSG00000079387|Q9P0U3-2|SENP1;ENSG00000079387|ENST00000549518|SENP1	nc|ENSG00000079387|Q9P0U3-2|SENP1	nc|ENSG00000079387|Q9P0U3-2|SENP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	615.3575439453125	2	615.358628	1228.7027	0.91539	0.00056329	-2.9528	-0.001817	-2.0374	-0.0012537	615.356833413619	104.5	2.6486	104.62	104.11	106.76	0.11684					178	65	4	0	0	0	0.7144	1	11071	11071		29.17	4.6509	1	3488600			31023	1420	20505	20515	35405	35405					0.09749910911796178
LLKVLQGKIEP	11	Unmodified	_LLKVLQGKIEP_					0	0	0			REV__ENSG00000166123|ENST00000340124|GPT2	REV__ENSG00000166123|ENST00000340124|GPT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2687683105469	3	413.267463	1236.78056	0.1219	5.0377E-05	1.2528	0.00051772	1.3747	0.0005681	413.2672502915767	40.321	1.5114	40.29	39.321	40.833	-0.030987					67	39	3	0	0	0	0.73277	1	2921	2921		25.892	4.8595	1	243080	+		31024	21252	20506	20516	35406	35406					0.17163968567865595
LLKVPLSFQR	10	Unmodified	_LLKVPLSFQR_					0	0	0		nc|ENSG00000143493|Q9NVH2-4|INTS7;nc|ENSG00000143493|Q9NVH2-2|INTS7;ENSG00000143493|ENST00000366994|INTS7	nc|ENSG00000143493|Q9NVH2-4|INTS7	nc|ENSG00000143493|Q9NVH2-4|INTS7	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.91510009765625	3	400.920286	1199.73903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.3	1	118.39	117.89	118.89	0.087753								0	0	0	0.45132	1	12486	12486		10.587	4.888	1				31025	4636	20507	20517	35407	35407					0.1471483259915658
LLKVPRPTSIQ	11	Unmodified	_LLKVPRPTSIQ_					0	0	0			REV__nc|ENSG00000102755|P17948-3|FLT1	REV__nc|ENSG00000102755|P17948-3|FLT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3924560546875	2	626.392805	1250.77106	6.325	0.0039619	-0.13149	-8.2365E-05	6.1935	0.0038796	626.3925398868604	109.87	0.514	109.94	109.72	110.23	0.068001					34	23	3	0	0	0	0.72228	1	13354	13354		27.882	2.3082	1	960900	+		31026	17351	20508	20518	35408	35408					0.15570200282331825
LLKWAEEA	8	Unmodified	_LLKWAEEA_					0	0	0			REV__nc|ENSG00000112984|O95235-2|KIF20A	REV__nc|ENSG00000112984|O95235-2|KIF20A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27764892578125	2	480.263468	958.512382	-0.86764	-0.0004167	-2.815	-0.001352	-3.6827	-0.0017687	480.26140647556485	84.707	0.32415	85.154	84.952	85.276	0.44736					9	7	2	0	0	0	0.4196	1	9905	9905		13.775	3.5101	1	39373	+		31027	17973	20509	20519	35409	35409					0.03146669040222605
LLKYPESGSGG	11	Unmodified	_LLKYPESGSGG_					0	0	0			REV__nc|ENSG00000101076|P41235-6|HNF4A	REV__nc|ENSG00000101076|P41235-6|HNF4A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.2885131835938	2	554.287671	1106.56079	-1.3781	-0.00076384	2.5117	0.0013922	1.1337	0.00062837	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.68532	1	2503	2503		33.922	0.40605	1	328550	+		31028	17240	20510	20520	35410	35410					0.011771178894605328
LLKYRRRHRKH	11	Unmodified	_LLKYRRRHRKH_					0	0	0		ENSG00000125266|ENST00000646441|EFNB2	ENSG00000125266|ENST00000646441|EFNB2	ENSG00000125266|ENST00000646441|EFNB2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	521.6571655273438	3	521.658681	1561.95422	-1.2934	-0.0006747	-1.8382	-0.00095891	-3.1316	-0.0016336	521.6576101839959	55.646	1.2053	55.646	55.208	56.414	0					123	38	5	0	0	0	0.84494	1	4776	4776		6.3209	0.6221	1	828200			31029	3379	20511	20521	35411	35411					0.19571611907304032
LLKYRRRHRKH	11	Unmodified	_LLKYRRRHRKH_					0	0	0		ENSG00000125266|ENST00000646441|EFNB2	ENSG00000125266|ENST00000646441|EFNB2	ENSG00000125266|ENST00000646441|EFNB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	521.6568603515625	3	521.658681	1561.95422	-0.25952	-0.00013538	-2.6898	-0.0014032	-2.9493	-0.0015385	521.6571947989914	55.231	1.5244	55.294	54.783	56.307	0.063725					161	52	4	0	0	0	0.8498	1	4663	4663		6.001	0.85868	1	1935400			31030	3379	20511	20521	35412	35412					0.19571611907304032
LLKYSRTN	8	Unmodified	_LLKYSRTN_					0	0	0			REV__nc|ENSG00000111731|Q86YS7-5|C2CD5	REV__nc|ENSG00000111731|Q86YS7-5|C2CD5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7873840332031	2	497.787641	993.56073	0.6952	0.00034606	-0.70483	-0.00035086	-0.0096335	-4.7955E-06	497.787148151759	23.215	0.7412	22.641	22.436	23.178	-0.57415					43	17	4	0	0	0	0.48059	2	1013	1013;1025		76.774	3.1607	1	612690	+		31031	29777	20512	20522	35413;35414	35413					0.06369162680141471
LLLAAGAWFG	10	Unmodified	_LLLAAGAWFG_					0	0	0		ENSG00000279301|ENST00000641193|OR2T11	ENSG00000279301|ENST00000641193|OR2T11	ENSG00000279301|ENST00000641193|OR2T11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.2890319824219	2	509.789653	1017.56475	0.70997	0.00036194	-1.6008	-0.00081605	-0.89078	-0.00045411	510.2902366882378	23.541	1.4942	23.543	23.046	24.54	0.0018959					93	73	2	0	0	0	0.86786	1	762	762		26.796	4.8362	1	119770			31032	9044	20513	20523	35415	35415					0.056672521738505566
LLLAALLALL	10	Unmodified	_LLLAALLALL_					0	0	0			REV__nc|ENSG00000185483|Q01973-3|ROR1	REV__nc|ENSG00000185483|Q01973-3|ROR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.3591918945312	2	512.362453	1022.71035	-0.36384	-0.00018642	-1.8259	-0.00093551	-2.1897	-0.0011219	512.3614625624688	74.51	0.74827	74.637	74.429	75.177	0.1271					38	21	2	0	0	0	0.85108	1	6885	6885		19.36	0	1	93099	+		31033	22769	20514	20524	35416	35416					0.1999071497003797
LLLAALLALL	10	Unmodified	_LLLAALLALL_					0	0	0			REV__nc|ENSG00000185483|Q01973-3|ROR1	REV__nc|ENSG00000185483|Q01973-3|ROR1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	512.362453	1022.71035	-0.36384	-0.00018642	-1.8259	-0.00093551	-2.1897	-0.0011219	512.3614625624688	74.51	0.74827	74.637	74.429	75.177	0.1271	0.04751	0.00048777	NaN	19.36	38	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93099	+		31034	22769	20514	20524							0.1999071497003797
LLLAALLALL	10	Unmodified	_LLLAALLALL_					0	0	0			REV__nc|ENSG00000185483|Q01973-3|ROR1	REV__nc|ENSG00000185483|Q01973-3|ROR1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	512.362453	1022.71035	0.5781	0.0002962	-2.8009	-0.0014351	-2.2228	-0.0011389	512.3610023585305	74.41	0.65471	74.542	74.421	75.076	0.13208	-0.04751	-0.00051133	NaN	19.36	35	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98259	+		31035	22769	20514	20524							0.1999071497003797
LLLAAPQR	8	Unmodified	_LLLAAPQR_					0	0	0			REV__ENST00000324225.8_1_11:117049569-117049740:+|nuORF	REV__ENST00000324225.8_1_11:117049569-117049740:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.28558349609375	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.844	1	40.848	40.348	41.348	0.0043983								0	0	0	0.31173	1	2621	2621		9.4706	0.64823	1		+		31036	25042	20515	20525	35417	35417					0.10438385376653514
LLLAGAYFNIN	11	Unmodified	_LLLAGAYFNIN_					0	0	0			REV__nc|ENSG00000186810|P49682-3|CXCR3	REV__nc|ENSG00000186810|P49682-3|CXCR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.8346557617188	2	604.837331	1207.66011	0.44894	0.00027153	-3.2585	-0.0019709	-2.8096	-0.0016993	604.8348226028828	50.147	0.59085	50.189	49.888	50.479	0.04224					39	15	4	0	0	0	0.54689	1	3924	3924		47.657	5.2612	1	318840	+		31037	22880	20516	20526	35418	35418					0.06458560574242256
LLLAGLSLSYG	11	Unmodified	_LLLAGLSLSYG_					0	0	0			REV__ENSG00000215644|ENST00000400723|GCGR	REV__ENSG00000215644|ENST00000400723|GCGR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8314208984375	2	553.826432	1105.63831	3.3377	0.0018485	2.6836	0.0014863	6.0213	0.0033347	553.827887624909	114.05	0.27068	114.02	113.91	114.18	-0.024452					11	7	2	0	0	0	0.72918	1	12641	12641		26.693	1.1189	1	71891	+		31038	23689	20517	20527	35419	35419					0.08971755825655237
LLLAGRWGFT	10	Unmodified	_LLLAGRWGFT_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3307495117188	2	567.326934	1132.63931	1.915	0.0010864	4.119	0.0023368	6.034	0.0034232	567.3293271441571	103.38	0.97102	103.61	103.31	104.28	0.22556					36	23	2	0	0	0	0.74274	1	12606	12606		42.396	1.618	1	586580	+		31039	21984	20518	20528	35420	35420					0.07830014985211164
LLLAGRWGFT	10	Unmodified	_LLLAGRWGFT_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	567.326934	1132.63931	-0.36318	-0.00020604	6.7191	0.0038119	6.3559	0.0036059	567.3308755613238	103.94	1.0641	103.94	103.68	104.75	0	0.15387	0.0019137	NaN	42.396	64	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	537980	+		31040	21984	20518	20528							0.07830014985211164
LLLAGRWGFT	10	Unmodified	_LLLAGRWGFT_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	567.326934	1132.63931	-1.2006	-0.00068111	7.0303	0.0039885	5.8297	0.0033073	567.3308292463805	103.89	0.95591	103.89	103.51	104.47	-0.0035706	0.10829	0.0022668	NaN	42.396	61	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	795820	+		31041	21984	20518	20528							0.07830014985211164
LLLAGRWGFT	10	Unmodified	_LLLAGRWGFT_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	567.326934	1132.63931	2.9338	0.0016644	2.749	0.0015596	5.6827	0.003224	567.328443680326	103.83	1.951	103.79	103.41	105.36	-0.043755	0.0089883	-0.002591	NaN	42.396	85	46	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	693220	+		31042	21984	20518	20528							0.07830014985211164
LLLAGRWGFT	10	Unmodified	_LLLAGRWGFT_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	567.326934	1132.63931	1.4966	0.00084907	4.241	0.002406	5.7376	0.0032551	567.3292754954379	103.71	0.94684	103.75	103.4	104.34	0.041481	-0.029882	-0.00089809	NaN	42.396	66	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	842650	+		31043	21984	20518	20528							0.07830014985211164
LLLAGRWGFT	10	Unmodified	_LLLAGRWGFT_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	567.326934	1132.63931	0.49962	0.00028345	5.3429	0.0030312	5.8425	0.0033146	567.3300322833625	103.58	0.99632	103.76	103.28	104.28	0.18298	-0.023049	0.00035224	NaN	42.396	56	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	678520	+		31044	21984	20518	20528							0.07830014985211164
LLLAGRWGFT	10	Unmodified	_LLLAGRWGFT_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	567.326934	1132.63931	0.86854	0.00049274	5.1277	0.0029091	5.9963	0.0034018	567.3298708305506	103.64	0.93005	103.77	103.44	104.37	0.12622	-0.01573	0.00010805	NaN	42.396	55	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	656890	+		31045	21984	20518	20528							0.07830014985211164
LLLAGRWGFT	10	Unmodified	_LLLAGRWGFT_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	567.326934	1132.63931	-1.3957	-0.00079184	7.429	0.0042147	6.0333	0.0034228	567.331165278907	103.64	0.91786	103.75	103.46	104.38	0.11495	-0.027306	0.0027192	NaN	42.396	52	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	592670	+		31046	21984	20518	20528							0.07830014985211164
LLLAIELD	8	Unmodified	_LLLAIELD_					0	0	0			REV__ENSG00000198840|ENST00000361227|MT-ND3	REV__ENSG00000198840|ENST00000361227|MT-ND3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.7554016113281	2	450.276044	898.537535	-1.2667	-0.00057039	-1.4902	-0.00067102	-2.757	-0.0012414	450.2752881490363	82.129	1.5914	82.129	81.583	83.174	0					90	40	3	0	0	0	0.4196	1	7600	7600		7.1934	0	1	214840	+		31047	23395	20519	20529	35421	35421					0.08420723842789357
LLLAKVLRLQP	11	Unmodified	_LLLAKVLRLQP_					0	0	0			REV__nc|ENSG00000263715|P34998-3|CRHR1	REV__nc|ENSG00000263715|P34998-3|CRHR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.4287109375	2	632.42919	1262.84383	-0.021077	-1.333E-05	1.2003	0.0007591	1.1792	0.00074577	632.4296452184271	108.26	0.70177	108.26	107.96	108.66	0					68	33	3	0	0	0	0.80516	1	11275	11275		10.265	0.5596	1	3975500	+		31048	18398	20520	20530	35422	35422					0.2229195407574025
LLLALAKK	8	Unmodified	_LLLALAKK_					0	0	0		ENST00000596510.5_1_19:48556252-48575644:-|nuORF;nc|ENSG00000105499|Q9UP65-2|PLA2G4C;ENSG00000105499|ENST00000599921|PLA2G4C;nc|ENSG00000105499|Q9UP65-3|PLA2G4C	ENST00000596510.5_1_19:48556252-48575644:-|nuORF	ENST00000596510.5_1_19:48556252-48575644:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001403808594	2	435.312764	868.610974	0.10443	4.5458E-05	-0.19327	-8.4131E-05	-0.08884	-3.8673E-05	435.313307828035	70.397	0.43773	70.944	70.762	71.199	0.54693					12	10	2	0	0	0	0.4196	1	7851	7851		10.185	5.0979	1	51381			31049	2222	20521	20531	35423	35423					0.17141317075925144
LLLALLTN	8	Unmodified	_LLLALLTN_					0	0	0			REV__ENSG00000198840|ENST00000361227|MT-ND3	REV__ENSG00000198840|ENST00000361227|MT-ND3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3002624511719	2	435.786579	869.558604	-0.62238	-0.00027123	-2.5683	-0.0011192	-3.1907	-0.0013905	435.7837076031206	73.037	0.10973	72.995	72.933	73.042	-0.042015					6	4	2	0	0	0	0.4196	1	7155	7155		12.959	0	1	28228	+		31050	23395	20522	20532	35424	35424					0.11860733942319257
LLLALLWGLAA	11	Unmodified	_LLLALLWGLAA_					0	0	0			REV__ENSG00000178015|ENST00000380007|GPR150	REV__ENSG00000178015|ENST00000380007|GPR150	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.1221313476562	2	577.37081	1152.72707	0.91072	0.00052582	-3.3695	-0.0019454	-2.4588	-0.0014196	577.8686151093441	24.162	0.20476	24.176	23.991	24.196	0.013994					10	9	2	0	0	0	0.17277	1	802	802		17.365	1.7232	1	40774	+		31051	22245	20523	20533	35425	35425					0.1568121585598874
LLLAPSKKKPL	11	Unmodified	_LLLAPSKKKPL_					0	0	0			REV__ENST00000309988.8_1_2:95719231-95719417:+|nuORF	REV__ENST00000309988.8_1_2:95719231-95719417:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2469787597656	3	403.27607	1206.80638	2.7171	0.0010957	-2.4452	-0.0009861	0.27186	0.00010964	403.27505902227955	104.67	0.19886	104.63	104.49	104.69	-0.04039					6	4	2	0	0	0	0.17925	1	11511	11511		5.4129	0	1	36242	+		31052	24876	20524	20534	35426	35426					0.21124862810142986
LLLARGLQLGR	11	Unmodified	_LLLARGLQLGR_					0	0	0			REV__ENSG00000158828|ENST00000321556|PINK1	REV__ENSG00000158828|ENST00000321556|PINK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9296569824219	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.79294	1	3956	3956		8.0344	0	1	2636600	+		31053	20625	20525	20535	35427	35427					0.17569039722025082
LLLARLRE	8	Unmodified	_LLLARLRE_					0	0	0		ENSG00000204610|ENST00000376694|TRIM15	ENSG00000204610|ENST00000376694|TRIM15	ENSG00000204610|ENST00000376694|TRIM15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.31494140625	2	492.321651	982.62875	0.74523	0.00036689	-3.4489	-0.001698	-2.7037	-0.0013311	492.31988209733197	16.027	0.37632	16.003	15.827	16.203	-0.024035					27	15	2	0	0	0	0.89043	1	82	82		35.618	0	1	92930			31054	8465	20526	20536	35428	35428					0.136740323308004
LLLASRTLHK	10	Unmodified	_LLLASRTLHK_					0	0	0			REV__nc|ENSG00000198431|Q16881-3|TXNRD1	REV__nc|ENSG00000198431|Q16881-3|TXNRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	576.8687744140625	2	576.36659	1150.71863	-0.95493	-0.00055039	4.4007	0.0025364	3.4458	0.001986	576.3689207411744	41.362	1.2441	41.321	40.856	42.1	-0.04081					57	32	2	0	0	0	0.8651	1	3091	3091		25.574	3.6142	1	219690	+		31055	30148	20527	20537	35429	35429					0.14929661939368088
LLLAWLALP	9	Unmodified	_LLLAWLALP_					0	0	0			REV__ENSG00000105509|ENST00000540069|HAS1	REV__ENSG00000105509|ENST00000540069|HAS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.32366943359375	2	505.325871	1008.63719	-1.3434	-0.00067885	-2.741	-0.0013851	-4.0844	-0.002064	505.3243696058118	80.768	1.0184	80.873	80.498	81.517	0.10526					64	25	4	0	0	0	0.72098	1	7664	7664		39.021	3.4032	1	628090	+		31056	17546	20528	20538	35430	35430					0.1332158624740032
LLLCFFRS	8	Unmodified	_LLLCFFRS_					0	0	0			REV__nc|ENSG00000113073|Q96Q91-4|SLC4A9	REV__nc|ENSG00000113073|Q96Q91-4|SLC4A9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.7471618652344	2	499.778231	997.541908	-0.97035	-0.00048496	-2.5697	-0.0012843	-3.5401	-0.0017692	500.27864756953414	74.56	0.32777	74.951	74.665	74.993	0.3911					13	7	2	0	0	0	0.4196	1	8383	8383		29.15	0	1	115290	+		31057	17976	20529	20539	35431	35431					0.04303909784732696
LLLCLHLLLL	10	Unmodified	_LLLCLHLLLL_					0	0	0		ENST00000532529.1_1_11:101827229-101827448:+|nuORF	ENST00000532529.1_1_11:101827229-101827448:+|nuORF	ENST00000532529.1_1_11:101827229-101827448:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353515625	2	582.382863	1162.75117	-1.3468	-0.00078435	-1.3897	-0.00080934	-2.7365	-0.0015937	582.3817706043661	103.18	0.23544	103.29	103.19	103.42	0.11494					10	5	3	0	0	0	0.37624	1	10835	10835		7.6903	0	1	398010			31058	13380	20530	20540	35432	35432					0.17630733018017963
LLLDKIKSY	9	Unmodified	_LLLDKIKSY_					0	0	0		nc|ENSG00000126822|A1L390-3|PLEKHG3;ENSG00000126822|ENST00000247226|PLEKHG3;ENST00000492928.1_1_14:65208317-65210839:+|nuORF;nc|ENSG00000126822|A1L390-2|PLEKHG3	nc|ENSG00000126822|A1L390-3|PLEKHG3	nc|ENSG00000126822|A1L390-3|PLEKHG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8410034179688	2	546.8368	1091.65905	1.265	0.00069175	4.2188	0.002307	5.4838	0.0029987	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.78058	1	11111	11111		30.504	7.4612	1	39577000			31059	3473	20531	20541	35433	35433					0.11688346205323796
LLLDKIKSY	9	Unmodified	_LLLDKIKSY_					0	0	0		nc|ENSG00000126822|A1L390-3|PLEKHG3;ENSG00000126822|ENST00000247226|PLEKHG3;ENST00000492928.1_1_14:65208317-65210839:+|nuORF;nc|ENSG00000126822|A1L390-2|PLEKHG3	nc|ENSG00000126822|A1L390-3|PLEKHG3	nc|ENSG00000126822|A1L390-3|PLEKHG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.8410034179688	2	546.8368	1091.65905	2.1574	0.0011797	3.8395	0.0020996	5.9968	0.0032793	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.67345	1	12200	12200		42.396	1.618	1	10074000			31060	3473	20531	20541	35434	35434					0.11688346205323796
LLLDLEHVLV	10	Unmodified	_LLLDLEHVLV_					0	0	0			REV__ENST00000514826.5_1_4:142142095-142142209:+|nuORF	REV__ENST00000514826.5_1_4:142142095-142142209:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3529663085938	2	582.355357	1162.69616	0.16989	9.8934E-05	-3.1776	-0.0018505	-3.0077	-0.0017515	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.85939	1	12678	12678		23.042	1.0826	1	635410	+		31061	28022	20532	20542	35435	35435					0.12132017751082458
LLLDLLLVAL	10	Unmodified	_LLLDLLLVAL_					0	0	0		ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3735961914062	2	548.373018	1094.73148	-1.4498	-0.00079504	3.6321	0.0019917	2.1823	0.0011967	548.3748802153438	35.47	1.1138	35.47	34.867	35.98	0					77	29	3	0	0	0	0.85438	1	1985	1985		16.473	0	1	301910			31062	8541	20533	20543	35436	35436					0.18790680278902983
LLLDLLLVAL	10	Unmodified	_LLLDLLLVAL_					0	0	0		ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3751831054688	2	548.373018	1094.73148	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.202	1	39.172	38.672	39.672	-0.03027								0	0	0	0.45132	1	2705	2705		10.265	3.0719	1				31063	8541	20533	20543	35437	35437					0.18790680278902983
LLLDLLLVAL	10	Unmodified	_LLLDLLLVAL_					0	0	0		ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3739013671875	2	548.373018	1094.73148	-0.26655	-0.00014617	2.6931	0.0014768	2.4265	0.0013306	548.374310727377	37.412	2.4822	37.359	36.203	38.685	-0.053558					161	55	4	0	0	0	0.88106	1	2498	2498		12.207	0.69583	1	654980			31064	8541	20533	20543	35438	35438					0.18790680278902983
LLLDLLLVAL	10	Unmodified	_LLLDLLLVAL_					0	0	0		ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3733520507812	2	548.373018	1094.73148	-0.93576	-0.00051314	3.3649	0.0018452	2.4292	0.0013321	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.8488	1	2383	2383		17.365	0.89182	1	651720			31065	8541	20533	20543	35439	35439					0.18790680278902983
LLLDLLLVAL	10	Unmodified	_LLLDLLLVAL_					0	0	0		ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	548.3739624023438	2	548.373018	1094.73148	0.27438	0.00015046	2.33	0.0012777	2.6044	0.0014282	548.3741056570226	37.106	1.654	37.206	36.174	37.827	0.099277					123	52	3	0	0	0	0.91594	1	2012	2012		6.7355	3.3255	1	393850			31066	8541	20533	20543	35440	35440					0.18790680278902983
LLLDLPLAD	9	Unmodified	_LLLDLPLAD_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7962341308594	2	491.794601	981.574648	-0.53143	-0.00026136	3.2632	0.0016048	2.7318	0.0013435	491.79619139735206	56.69	1.2684	56.664	56.294	57.562	-0.026108					93	62	2	0	0	0	0.7932	1	4797	4797		23.042	1.3402	1	1036100	+		31067	17362	20534	20544	35441	35441					0.08312395388566074
LLLDPGSH	8	Unmodified	_LLLDPGSH_					0	0	0			REV__ENST00000586142.5_1_18:43310001-43310190:+|nuORF	REV__ENST00000586142.5_1_18:43310001-43310190:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2459716796875	2	426.23471	850.454868	2.6062	0.0011109	-3.3279	-0.0014185	-0.7217	-0.00030761	426.2331950964688	87.686	0.21735	87.739	87.555	87.772	0.053032					5	4	2	0	0	0	0.4196	1	8957	8957		28.254	0	1	20102	+		31068	29101	20535	20545	35442	35442					0.0236582683467077
LLLDPLGP	8	Unmodified	_LLLDPLGP_					0	0	0			REV__ENST00000392793.5_3_11:121008340-121008424:+|nuORF	REV__ENST00000392793.5_3_11:121008340-121008424:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.258056640625	2	419.257654	836.500755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.445	1	69.445	68.945	69.945	0								0	0	0	0.29199	1	6190	6190		29.842	0	1		+		31069	26032	20536	20546	35443	35443					0.07596472016905409
LLLEIIEFRA	10	Unmodified	_LLLEIIEFRA_					0	0	0		ENSG00000125457|ENST00000325102|MIF4GD;nc|ENSG00000125457|A9UHW6-2|MIF4GD;nc|ENSG00000125457|A9UHW6-3|MIF4GD	ENSG00000125457|ENST00000325102|MIF4GD	ENSG00000125457|ENST00000325102|MIF4GD	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2498474121094	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.84	1	114.85	114.35	115.35	0.0094528								0	0	0	0.45132	1	13852	13852		16.007	0.086121	1				31070	3391	20537	20547	35444	35444					0.12347706642412959
LLLELVVGA	9	Unmodified	_LLLELVVGA_					0	0	0			REV__ENST00000508662.5_1_5:149618053-149669203:-|nuORF	REV__ENST00000508662.5_1_5:149618053-149669203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.80120849609375	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	1	3743	3743		17.365	5.1581	1	1294000	+		31071	27929	20538	20548	35445	35445					0.11905003113804469
LLLEPALYD	9	Unmodified	_LLLEPALYD_					0	0	0			REV__chr10:27173259-27186379|62|12.68|0.72|4.15|+|ENST00000477034|MASTL,MASTL	REV__chr10:27173259-27186379|62|12.68|0.72|4.15|+|ENST00000477034|MASTL,MASTL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7938232421875	2	523.792058	1045.56956	0.20589	0.00010784	3.3983	0.00178	3.6042	0.0018879	523.7937468382506	19.848	1.1814	19.218	18.937	20.118	-0.6296					65	25	3	0	0	0	0.76996	1	573	573		33.516	0	1	863270	+		31072	15471	20539	20549	35446	35446					0.04860091525961252
LLLEPLAS	8	Unmodified	_LLLEPLAS_					0	0	0			REV__ENST00000493538.5_1_2:25799677-25799803:-|nuORF	REV__ENST00000493538.5_1_2:25799677-25799803:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2616271972656	2	428.262936	854.51132	-1.6655	-0.00071328	-1.2622	-0.00054056	-2.9277	-0.0012538	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.89457	1	9160	9160		37.028	0	1	44776000	+		31073	27696	20540	20550	35447	35447					0.07824454671322201
LLLEPLAS	8	Unmodified	_LLLEPLAS_					0	0	0			REV__ENST00000493538.5_1_2:25799677-25799803:-|nuORF	REV__ENST00000493538.5_1_2:25799677-25799803:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.2616271972656	2	428.262936	854.51132	0.64464	0.00027608	-3.646	-0.0015614	-3.0014	-0.0012854	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.86791	1	9115	9115		28.254	2.8041	1	40631000	+		31074	27696	20540	20550	35448	35448					0.07824454671322201
LLLEQVAPPL	10	Unmodified	_LLLEQVAPPL_					0	0	0			REV__ENSG00000205978|ENST00000382554|NYNRIN	REV__ENSG00000205978|ENST00000382554|NYNRIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8405151367188	2	546.8368	1091.65905	3.386	0.0018516	1.8298	0.0010006	5.2158	0.0028522	546.8379771318001	101.02	3.777	100.97	100.36	104.13	-0.052116					284	90	6	0	0	0	0.5766	2	10942	10942;10990		51.335	8.861	1	39176000	+		31075	23582	20541	20551	35449;35450	35449					0.11688346205323796
LLLEQVAPPL	10	Unmodified	_LLLEQVAPPL_					0	0	0			REV__ENSG00000205978|ENST00000382554|NYNRIN	REV__ENSG00000205978|ENST00000382554|NYNRIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8404541015625	2	546.8368	1091.65905	1.265	0.00069175	4.2188	0.002307	5.4838	0.0029987	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.5766	5	10994	10804;10828;10900;10924;10994		51.335	10.557	1	39577000	+		31076	23582	20541	20551	35451;35452;35453;35454;35455	35455					0.11688346205323796
LLLEQVAPPL	10	Unmodified	_LLLEQVAPPL_					0	0	0			REV__ENSG00000205978|ENST00000382554|NYNRIN	REV__ENSG00000205978|ENST00000382554|NYNRIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.841064453125	2	546.8368	1091.65905	2.1574	0.0011797	3.8395	0.0020996	5.9968	0.0032793	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.43769	2	12235	12235;12362		60.972	11.53	1	10074000	+		31077	23582	20541	20551	35456;35457	35456					0.11688346205323796
LLLEVVDK	8	Unmodified	_LLLEVVDK_					0	0	0		ENSG00000198198|ENST00000634258|SZT2;nc|ENSG00000198198|Q5T011-5|SZT2	ENSG00000198198|ENST00000634258|SZT2	ENSG00000198198|ENST00000634258|SZT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.7911071777344	2	464.789318	927.564084	0.89139	0.00041431	1.9223	0.00089347	2.8137	0.0013078	464.79003742399567	33.921	1.5866	34.225	33.702	35.289	0.30494					91	38	3	0	0	0	0.87479	1	2516	2516		30.504	0	1	1052300			31078	8253	20542	20552	35458	35458					0.09740412734140591
LLLFAAAAGAQ	11	Unmodified	_LLLFAAAAGAQ_					0	0	0			REV__ENST00000371712.3_1_9:139333425-139334268:-|nuORF	REV__ENST00000371712.3_1_9:139333425-139334268:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3037109375	2	523.305667	1044.59678	-0.7542	-0.00039468	-3.0063	-0.0015732	-3.7605	-0.0019679	523.3039964981095	91.826	2.332	91.826	91.507	93.839	0					135	53	3	0	0	0	0.61774	1	9058	9058		42.396	15.6	1	769560	+		31079	25695	20543	20553	35459	35459					0.07626619856978323
LLLFFPLAE	9	Unmodified	_LLLFFPLAE_					0	0	0			REV__nc|ENSG00000113161|P04035-2|HMGCR	REV__nc|ENSG00000113161|P04035-2|HMGCR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8173828125	2	531.815336	1061.61612	1.2435	0.00066132	1.9851	0.0010557	3.2286	0.001717	531.8162466604691	101.09	1.2403	101.14	100.73	101.97	0.044823					55	29	3	0	0	0	0.7932	1	10874	10874		25.45	0.93098	1	527610	+		31080	17979	20544	20554	35460	35460					0.08777576147895161
LLLFFVLPS	9	Unmodified	_LLLFFVLPS_					0	0	0			REV__nc|ENSG00000101276|Q9NQ40-2|SLC52A3	REV__nc|ENSG00000101276|Q9NQ40-2|SLC52A3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8274536132812	2	524.825704	1047.63685	-0.63596	-0.00033377	3.0614	0.0016067	2.4255	0.0012729	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.7932	1	10420	10420		24.203	0	1	15330000	+		31081	17260	20545	20555	35461	35461					0.1149416652756372
LLLFHRGG	8	Unmodified	_LLLFHRGG_					0	0	0		ENST00000584581.5_1_18:72178181-72179738:+|nuORF	ENST00000584581.5_1_18:72178181-72179738:+|nuORF	ENST00000584581.5_1_18:72178181-72179738:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7725830078125	2	456.774337	911.534121	-1.1318	-0.00051697	-2.8364	-0.0012956	-3.9682	-0.0018126	456.7727770907754	90.264	1.662	90.264	89.603	91.265	0					93	38	4	0	0	0	0.86288	1	8794	8794		26.796	2.5934	1	669440			31082	14135	20546	20556	35462	35462					0.07481518579481872
LLLFSPSS	8	Unmodified	_LLLFSPSS_					0	0	0			REV__ENST00000316097.12_1_19:1924295-1924604:+|nuORF	REV__ENST00000316097.12_1_19:1924295-1924604:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.2471008300781	2	432.247286	862.48002	0.71048	0.0003071	-1.3937	-0.00060241	-0.68319	-0.00029531	432.2467662501791	97.978	1.1971	98.139	97.71	98.908	0.16073					69	26	4	0	0	0	0.90024	1	10173	10173		39.021	1.993	1	628050	+		31083	24951	20547	20557	35463	35463					0.04327881637243536
LLLFVLLESK	10	Unmodified	_LLLFVLLESK_					0	0	0		ENST00000380437.8_1_9:19290781-19335045:+|nuORF;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C	ENST00000380437.8_1_9:19290781-19335045:+|nuORF	ENST00000380437.8_1_9:19290781-19335045:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.78125	2	587.875925	1173.7373	-0.99359	-0.00058411	-1.6706	-0.00098213	-2.6642	-0.0015662	588.3770403888658	44.777	0.36669	45.622	45.3	45.667	0.84437					11	8	2	0	0	0	0.37624	1	4118	4118		12.812	3.1061	1	151250			31084	4173	20548	20558	35464	35464					0.15737778790548873
LLLGAVAAP	9	Unmodified	_LLLGAVAAP_					0	0	0			REV__ENST00000526749.1_1_8:145735004-145735891:+|nuORF	REV__ENST00000526749.1_1_8:145735004-145735891:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.76715087890625	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.7932	1	2569	2569		21.702	0	1	795210	+		31085	21418	20549	20559	35465	35465					0.0979217825380374
LLLGAVAAP	9	Unmodified	_LLLGAVAAP_					0	0	0			REV__ENST00000526749.1_1_8:145735004-145735891:+|nuORF	REV__ENST00000526749.1_1_8:145735004-145735891:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.76702880859375	2	412.765646	823.516739	-0.024773	-1.0226E-05	2.7576	0.0011383	2.7329	0.001128	412.7671753724154	37.892	4.8812	37.868	35.596	40.477	-0.023979					267	113	4	0	0	0	0.78292	1	2557	2557		29.842	0	1	1546000	+		31086	21418	20549	20559	35466	35466					0.0979217825380374
LLLGCGLLSV	10	Unmodified	_LLLGCGLLSV_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.30084228515625	2	494.298996	986.583439	2.3073	0.0011405	1.1641	0.0005754	3.4713	0.0017159	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.86305	1	10654	10654		31.955	0	1	53958000			31087	3201	20550	20560	35467	35467					0.08961045753403596
LLLGDDHLY	9	Unmodified	_LLLGDDHLY_					0	0	0		nc|ENSG00000165102|Q68CP4|HGSNAT;ENSG00000165102|ENST00000379644|HGSNAT;ENST00000520678.1_1_8:43037358-43049067:+|nuORF	nc|ENSG00000165102|Q68CP4|HGSNAT	nc|ENSG00000165102|Q68CP4|HGSNAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.7785034179688	2	529.779482	1057.54441	0.30806	0.0001632	-0.16672	-8.8323E-05	0.14134	7.4879E-05	529.7792376545807	64.462	0.86823	64.428	63.938	64.807	-0.034256					51	22	3	0	0	0	0.77546	1	6136	6136		31.955	1.4512	1	324590			31088	6045	20551	20561	35468	35468					0.017940367233904908
LLLGERLRHG	10	Unmodified	_LLLGERLRHG_					0	0	0			REV__nc|ENSG00000167920|Q8N816-2|KRT10-AS1	REV__nc|ENSG00000167920|Q8N816-2|KRT10-AS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3546142578125	2	582.354014	1162.69348	0.16989	9.8934E-05	-0.87197	-0.0005078	-0.70208	-0.00040886	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.85694	1	12483	12483		21.96	0.27414	1	635410	+		31089	30009	20552	20562	35469	35469					0.11863607136797327
LLLGKGRL	8	Unmodified	_LLLGKGRL_					0	0	0			REV__ENST00000358738.3_1_14:64989177-64989240:+|nuORF	REV__ENST00000358738.3_1_14:64989177-64989240:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3001403808594	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.81724	1	8112	8112		14.664	0.88877	1	5485100	+		31090	25442	20553	20563	35470	35470					0.14627262273359065
LLLGKGRL	8	Unmodified	_LLLGKGRL_					0	0	0			REV__ENST00000358738.3_1_14:64989177-64989240:+|nuORF	REV__ENST00000358738.3_1_14:64989177-64989240:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001708984375	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.85228	1	8185	8185		10.185	0	1	6323600	+		31091	25442	20553	20563	35471	35471					0.14627262273359065
LLLGKNFLN	9	Unmodified	_LLLGKNFLN_					0	0	0		nc|ENSG00000204524|Q5CZA5-2|ZNF805;ENSG00000204524|ENST00000414468|ZNF805	nc|ENSG00000204524|Q5CZA5-2|ZNF805	nc|ENSG00000204524|Q5CZA5-2|ZNF805	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3140258789062	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.3064	-0.0011908	-3.8683	-0.0019972	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.69914	2	10739	10702;10739		40.573	10.069	1	1268100			31092	8453	20554	20564	35472;35473	35473					0.10343210236646883
LLLGKPSK	8	Unmodified	_LLLGKPSK_					0	0	0			REV__ENST00000528694.1_1_11:829854-830133:+|nuORF	REV__ENST00000528694.1_1_11:829854-830133:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.2616271972656	2	428.286746	854.558939	0.64282	0.00027531	-3.102	-0.0013286	-2.4592	-0.0010532	428.2850681528911	90.686	0.43991	90.84	90.555	90.995	0.15388					20	10	3	0	0	0	0.4196	1	9115	9115		24.203	0	1	197660	+		31093	28250	20555	20565	35474	35474					0.12584153662180597
LLLGKSEL	8	Unmodified	_LLLGKSEL_					0	0	0			REV__ENSG00000146282|ENST00000369536|RARS2	REV__ENSG00000146282|ENST00000369536|RARS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.7749938964844	2	436.776211	871.537869	0.90159	0.00039379	-3.9864	-0.0017412	-3.0848	-0.0013474	436.7743718767523	90.506	2.2468	90.957	90.49	92.737	0.45058					142	53	4	0	0	0	0.88915	1	10740	10740		35.201	0	1	8766100	+		31094	20005	20556	20566	35475	35475					0.09696143562666748
LLLGLELSV	9	Unmodified	_LLLGLELSV_					0	0	0			REV__ENSG00000147804|ENST00000301305|SLC39A4	REV__ENSG00000147804|ENST00000301305|SLC39A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.8056335449219	2	478.804968	955.595384	0.23734	0.00011364	1.7403	0.00083325	1.9776	0.00094689	478.8052722512074	40.349	0.98389	40.43	39.962	40.946	0.081345					59	33	3	0	0	0	0.7932	1	2497	2497		19.36	1.0356	1	253080	+		31095	20086	20557	20567	35476	35476					0.11580985768227947
LLLGLGAPP	9	Unmodified	_LLLGLGAPP_					0	0	0			REV__ENST00000469086.5_1_22:39136824-39138467:-|nuORF	REV__ENST00000469086.5_1_22:39136824-39138467:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.77496337890625	2	425.773471	849.53239	-0.27567	-0.00011737	3.7288	0.0015876	3.4531	0.0014702	425.77498181524743	38.327	1.6801	38.849	38.513	40.193	0.52235					122	39	5	0	0	0	0.72098	1	3135	3135		39.021	0	1	16884000	+		31096	27192	20558	20568	35477	35477					0.10160464770854105
LLLGLGFLSL	10	Unmodified	_LLLGLGFLSL_					0	0	0		nc|ENSG00000137868|Q9BX79-3|STRA6;chr15:74196120-74197338|30|11.87|0.22|5.78|-|ENST00000423167|STRA6,STRA6;ENSG00000137868|ENST00000395105|STRA6;nc|ENSG00000137868|Q9BX79-6|STRA6;nc|ENSG00000137868|Q9BX79-5|STRA6;nc|ENSG00000137868|Q9BX79-4|STRA6;chr15:74202282-74202418|48|45.25|0.4|6.84|-|ENST00000563965|STRA6,STRA6;ENST00000574439.5_1_15:74472423-74490170:-|nuORF	nc|ENSG00000137868|Q9BX79-3|STRA6	nc|ENSG00000137868|Q9BX79-3|STRA6	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035278320312	2	523.336436	1044.65832	-0.80457	-0.00042106	-1.196	-0.0006259	-2.0005	-0.001047	523.3355129587486	88.764	0.32587	88.764	88.548	88.874	0					9	7	2	0	0	0	0.37624	1	8550	8550		15.642	0	1	47442			31097	191	20559	20569	35478	35478					0.13777551556290746
LLLGLGFLSL	10	Unmodified	_LLLGLGFLSL_					0	0	0		nc|ENSG00000137868|Q9BX79-3|STRA6;chr15:74196120-74197338|30|11.87|0.22|5.78|-|ENST00000423167|STRA6,STRA6;ENSG00000137868|ENST00000395105|STRA6;nc|ENSG00000137868|Q9BX79-6|STRA6;nc|ENSG00000137868|Q9BX79-5|STRA6;nc|ENSG00000137868|Q9BX79-4|STRA6;chr15:74202282-74202418|48|45.25|0.4|6.84|-|ENST00000563965|STRA6,STRA6;ENST00000574439.5_1_15:74472423-74490170:-|nuORF	nc|ENSG00000137868|Q9BX79-3|STRA6	nc|ENSG00000137868|Q9BX79-3|STRA6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.336436	1044.65832	0.7116	0.00037241	1.7113	0.00089559	2.4229	0.001268	523.3374804772299	88.163	0.12299	88.313	88.242	88.365	0.15055					4	2	2	0	0	0	0.37624	1	8738	8738		15.642	0.77694	1	52238			31098	191	20559	20569	35479	35479					0.13777551556290746
LLLGLLLLLEA	11	Unmodified	_LLLGLLLLLEA_					0	0	0			REV__ENSG00000101230|ENST00000262487|ISM1	REV__ENSG00000101230|ENST00000262487|ISM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.866455078125	2	590.8994	1179.78425	3.3795	0.0019969	2.3361	0.0013804	5.7156	0.0033773	590.9015415284342	104.26	0.21943	104.21	104.05	104.27	-0.043755					6	4	2	0	0	0	0.17806	1	11432	11432		5.9211	0	1	20158	+		31099	17259	20560	20570	35480	35480					0.20154638341750797
LLLGLLLLLEA	11	Unmodified	_LLLGLLLLLEA_					0	0	0			REV__ENSG00000101230|ENST00000262487|ISM1	REV__ENSG00000101230|ENST00000262487|ISM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8665161132812	2	590.8994	1179.78425	-1.3191	-0.00077946	-0.12479	-7.374E-05	-1.4439	-0.0008532	590.8995590287317	104.13	0.21637	104.23	104.1	104.32	0.093857					6	4	2	0	0	0	0.17478	1	10965	10965		10.265	0.5596	1	15158	+		31100	17259	20560	20570	35481	35481					0.20154638341750797
LLLGLLPGS	9	Unmodified	_LLLGLLPGS_					0	0	0			REV__chr7:842130-851384|13|10.08|0.17|5.92|+|1|SUN1,SUN1|2	REV__chr7:842130-851384|13|10.08|0.17|5.92|+|1|SUN1,SUN1|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7867736816406	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.7932	1	2309	2309		19.36	1.0356	1	12467000	+		31101	15913	20561	20571	35482	35482					0.11308733942337312
LLLGLLRPLR	10	Unmodified	_LLLGLLRPLR_					0	0	0		nc|ENSG00000131650|Q8NCW0-5|KREMEN2;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;ENSG00000131650|ENST00000303746|KREMEN2	nc|ENSG00000131650|Q8NCW0-5|KREMEN2	nc|ENSG00000131650|Q8NCW0-5|KREMEN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3534545898438	2	582.402976	1162.7914	0.88314	0.00051434	4.3605	0.0025396	5.2437	0.0030539	582.4050692057837	103.26	0.49663	103.39	103.25	103.75	0.12622					17	12	3	0	0	0	0.37624	1	10894	10894		6.7355	3.3255	1	288760			31102	3741	20562	20572	35483	35483					0.21651415732776513
LLLGLPIQPE	10	Unmodified	_LLLGLPIQPE_					0	0	0		ENSG00000180016|ENST00000322608|OR1E1;ENSG00000127780|ENST00000248384|OR1E2;nc|ENSG00000142163|Q8WZA6|OR1E3	ENSG00000180016|ENST00000322608|OR1E1	ENSG00000180016|ENST00000322608|OR1E1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.8400268554688	2	546.8368	1091.65905	2.1574	0.0011797	3.8395	0.0020996	5.9968	0.0032793	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.74274	1	12307	12307		42.396	4.5846	1	10074000			31103	3514	20563	20573	35484	35484					0.11688346205346534
LLLGLSLH	8	Unmodified	_LLLGLSLH_					0	0	0			REV__ENSG00000129749|ENST00000250699|CHRNA10	REV__ENSG00000129749|ENST00000250699|CHRNA10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.2557067871094	2	433.278921	864.543289	2.718	0.0011777	0.98037	0.00042478	3.6984	0.0016024	433.27952414665344	107.25	0.92795	107.21	106.84	107.77	-0.034134					32	21	3	0	0	0	0.4196	1	11900	11900		23.037	0	1	295570	+		31104	18832	20564	20574	35485	35485					0.10559867145138924
LLLGLVGGVC	10	Unmodified	_LLLGLVGGVC_					0	0	0		nc|ENSG00000146828|Q9BXP2-2|SLC12A9;nc|ENSG00000146828|Q9BXP2-3|SLC12A9;nc|ENSG00000146828|Q9BXP2-4|SLC12A9;ENSG00000146828|ENST00000354161|SLC12A9;ENST00000467972.5_1_7:100454518-100454833:+|nuORF	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2879638671875	2	472.285889	942.557224	2.0257	0.00095671	1.7357	0.00081974	3.7614	0.0017765	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.86786	1	10514	10514		26.796	0.10319	1	50843000			31105	4860	20565	20575	35486	35486					0.08364776581925071
LLLGLVGGVC	10	Unmodified	_LLLGLVGGVC_					0	0	0		nc|ENSG00000146828|Q9BXP2-2|SLC12A9;nc|ENSG00000146828|Q9BXP2-3|SLC12A9;nc|ENSG00000146828|Q9BXP2-4|SLC12A9;ENSG00000146828|ENST00000354161|SLC12A9;ENST00000467972.5_1_7:100454518-100454833:+|nuORF	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28759765625	2	472.285889	942.557224	-0.026744	-1.2631E-05	3.8174	0.0018029	3.7907	0.0017903	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.85976	4	10363	10018;10363;10375;10460		35.201	2.2921	1	48574000			31106	4860	20565	20575	35487;35488;35489;35490	35488					0.08364776581925071
LLLGLVGGVC	10	Unmodified	_LLLGLVGGVC_					0	0	0		nc|ENSG00000146828|Q9BXP2-2|SLC12A9;nc|ENSG00000146828|Q9BXP2-3|SLC12A9;nc|ENSG00000146828|Q9BXP2-4|SLC12A9;ENSG00000146828|ENST00000354161|SLC12A9;ENST00000467972.5_1_7:100454518-100454833:+|nuORF	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2882385253906	2	472.285889	942.557224	0.72641	0.00034307	3.0865	0.0014577	3.8129	0.0018008	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.85976	2	10193	9901;10193		35.201	0.10319	1	48696000			31107	4860	20565	20575	35491;35492	35492					0.08364776581925071
LLLGLVGGVC	10	Unmodified	_LLLGLVGGVC_					0	0	0		nc|ENSG00000146828|Q9BXP2-2|SLC12A9;nc|ENSG00000146828|Q9BXP2-3|SLC12A9;nc|ENSG00000146828|Q9BXP2-4|SLC12A9;ENSG00000146828|ENST00000354161|SLC12A9;ENST00000467972.5_1_7:100454518-100454833:+|nuORF	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2874450683594	2	472.285889	942.557224	0.76193	0.00035985	3.8005	0.0017949	4.5625	0.0021548	472.28771256093336	99.111	1.7073	99.267	98.769	100.48	0.15659					91	39	3	0	0	0	0.86786	1	10372	10372		26.796	1.222	1	525470			31108	4860	20565	20575	35493	35493					0.08364776581925071
LLLGLWLPL	9	Unmodified	_LLLGLWLPL_					0	0	0		ENST00000314616.10_1_17:27028648-27028927:+|nuORF	ENST00000314616.10_1_17:27028648-27028927:+|nuORF	ENST00000314616.10_1_17:27028648-27028927:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.282958984375	2	519.341521	1036.66849	0.30545	0.00015863	-3.9498	-0.0020513	-3.6444	-0.0018927	519.3393455371227	55.484	0.70451	56.053	55.7	56.404	0.56836					22	16	2	0	0	0	0.20789	1	5690	5690		29.842	0	1	159030			31109	9962	20566	20576	35494	35494					0.1516215928152178
LLLGPALFSE	10	Unmodified	_LLLGPALFSE_					0	0	0		ENST00000528368.2_1_11:119209668-119209890:-|nuORF	ENST00000528368.2_1_11:119209668-119209890:-|nuORF	ENST00000528368.2_1_11:119209668-119209890:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2931518554688	2	530.307875	1058.6012	1.709	0.00090631	-1.7111	-0.00090743	-0.0021009	-1.1141E-06	530.3067422856751	91.578	1.3732	92.028	91.021	92.394	0.44958					52	32	3	0	0	0	0.37624	1	10746	10746		38.806	5.2906	1	309510			31110	13300	20567	20577	35495	35495					0.07424084279909948
LLLGPARGF	9	Unmodified	_LLLGPARGF_					0	0	0		ENSG00000174804|ENST00000531380|FZD4	ENSG00000174804|ENST00000531380|FZD4	ENSG00000174804|ENST00000531380|FZD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.28802490234375	2	472.28982	942.565087	-0.38046	-0.00017969	-3.8175	-0.001803	-4.198	-0.0019827	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.76402	1	11558	11558		35.201	1.6851	1	24731000			31111	6965	20568	20578	35496	35496					0.0915067189371257
LLLGPEIT	8	Unmodified	_LLLGPEIT_					0	0	0			REV__ENSG00000079308|ENST00000682258|TNS1	REV__ENSG00000079308|ENST00000682258|TNS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2615966796875	2	428.262936	854.51132	-1.1356	-0.00048635	-1.7013	-0.00072859	-2.8369	-0.0012149	428.2621524287907	91.088	2.5476	91.088	90.477	93.025	0					222	59	5	0	0	0	0.86791	2	8868	8856;8868		37.028	2.8041	1	33233000	+		31112	16779	20569	20579	35497;35498	35498					0.0782445467133357
LLLGPEIT	8	Unmodified	_LLLGPEIT_					0	0	0			REV__ENSG00000079308|ENST00000682258|TNS1	REV__ENSG00000079308|ENST00000682258|TNS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2615051269531	2	428.262936	854.51132	-0.17868	-7.6523E-05	-2.7106	-0.0011609	-2.8893	-0.0012374	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.82464	2	9304	9304;9363		21.702	1.2205	1	52688000	+		31113	16779	20569	20579	35499;35500	35499					0.0782445467133357
LLLGPEIT	8	Unmodified	_LLLGPEIT_					0	0	0			REV__ENSG00000079308|ENST00000682258|TNS1	REV__ENSG00000079308|ENST00000682258|TNS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2616271972656	2	428.262936	854.51132	1.4286	0.0006118	-4.4022	-0.0018853	-2.9736	-0.0012735	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.86791	1	9568	9568		28.254	1.4582	1	57042000	+		31114	16779	20569	20579	35501	35501					0.0782445467133357
LLLGPEIT	8	Unmodified	_LLLGPEIT_					0	0	0			REV__ENSG00000079308|ENST00000682258|TNS1	REV__ENSG00000079308|ENST00000682258|TNS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2615661621094	2	428.262936	854.51132	-1.6655	-0.00071328	-1.2622	-0.00054056	-2.9277	-0.0012538	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.86791	5	9064	9052;9064;9076;9088;9136		37.028	2.8041	1	44776000	+		31115	16779	20569	20579	35502;35503;35504;35505;35506	35503					0.0782445467133357
LLLGPEIT	8	Unmodified	_LLLGPEIT_					0	0	0			REV__ENSG00000079308|ENST00000682258|TNS1	REV__ENSG00000079308|ENST00000682258|TNS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.2613220214844	2	428.262936	854.51132	0.64464	0.00027608	-3.646	-0.0015614	-3.0014	-0.0012854	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.82464	1	9151	9151		21.702	1.2205	1	40631000	+		31116	16779	20569	20579	35507	35507					0.0782445467133357
LLLGPEIT	8	Unmodified	_LLLGPEIT_					0	0	0			REV__ENSG00000079308|ENST00000682258|TNS1	REV__ENSG00000079308|ENST00000682258|TNS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2614440917969	2	428.262936	854.51132	-1.8497	-0.00079216	-1.179	-0.00050492	-3.0287	-0.0012971	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.89457	1	9093	9093		37.028	1.4102	1	31323000	+		31117	16779	20569	20579	35508	35508					0.0782445467133357
LLLGPEIT	8	Unmodified	_LLLGPEIT_					0	0	0			REV__ENSG00000079308|ENST00000682258|TNS1	REV__ENSG00000079308|ENST00000682258|TNS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.26177978515625	2	428.262936	854.51132	1.2297	0.00052665	-4.2128	-0.0018042	-2.9831	-0.0012775	428.26104076888095	90.552	2.3243	91.003	90.412	92.737	0.45058					198	55	5	0	0	0	0.89457	1	10674	10674		37.028	0	1	32404000	+		31118	16779	20569	20579	35509	35509					0.0782445467133357
LLLGPEIT	8	Unmodified	_LLLGPEIT_					0	0	0			REV__ENSG00000079308|ENST00000682258|TNS1	REV__ENSG00000079308|ENST00000682258|TNS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.26165771484375	2	428.262936	854.51132	-1.021	-0.00043726	-1.8984	-0.00081301	-2.9194	-0.0012503	428.26203928148993	90.556	2.3584	91.026	90.524	92.882	0.47068					198	56	5	0	0	0	0.86791	1	10773	10773		28.254	0	1	38446000	+		31119	16779	20569	20579	35510	35510					0.0782445467133357
LLLGPLRASDS	11	Unmodified	_LLLGPLRASDS_					0	0	0		ENSG00000130287|ENST00000252575|NCAN	ENSG00000130287|ENST00000252575|NCAN	ENSG00000130287|ENST00000252575|NCAN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	571.3312377929688	2	571.332413	1140.65027	-0.35036	-0.00020017	-1.9792	-0.0011308	-2.3296	-0.001331	571.3312644155609	102.52	1.12	102.52	102.02	103.14	0					76	28	4	0	0	0	0.66929	1	10511	10511		36.447	8.5645	1	1839200			31120	3629	20570	20580	35511	35511					0.08557372568861865
LLLGPLRASDS	11	Unmodified	_LLLGPLRASDS_					0	0	0		ENSG00000130287|ENST00000252575|NCAN	ENSG00000130287|ENST00000252575|NCAN	ENSG00000130287|ENST00000252575|NCAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.33154296875	2	571.332413	1140.65027	-1.1055	-0.00063161	-1.221	-0.00069761	-2.3265	-0.0013292	571.3317125893625	102.4	2.1601	102.42	101.65	103.81	0.01989					122	52	4	0	0	0	0.68532	1	11025	11025		33.922	3.6039	1	2384600			31121	3629	20570	20580	35512	35512					0.08557372568861865
LLLGPLRASDS	11	Unmodified	_LLLGPLRASDS_					0	0	0		ENSG00000130287|ENST00000252575|NCAN	ENSG00000130287|ENST00000252575|NCAN	ENSG00000130287|ENST00000252575|NCAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	571.3314819335938	2	571.332413	1140.65027	1.4665	0.00083786	-3.9942	-0.002282	-2.5277	-0.0014442	571.3301291539012	102.21	2.4124	102.26	101.34	103.75	0.043198					126	58	4	0	0	0	0.66929	1	11050	11050		36.447	8.3653	1	2089600			31122	3629	20570	20580	35513	35513					0.08557372568861865
LLLGPLRASDS	11	Unmodified	_LLLGPLRASDS_					0	0	0		ENSG00000130287|ENST00000252575|NCAN	ENSG00000130287|ENST00000252575|NCAN	ENSG00000130287|ENST00000252575|NCAN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.3307495117188	2	571.332413	1140.65027	0.87236	0.00049841	-3.3864	-0.0019347	-2.514	-0.0014363	571.3304741505596	102.17	3.4204	102.3	101.59	105.01	0.13523					157	84	4	0	0	0	0.7144	2	10718	10718;10855		29.17	2.374	1	3995900			31123	3629	20570	20580	35514;35515	35514					0.08557372568861865
LLLGPMVI	8	Unmodified	_LLLGPMVI_					0	0	0			REV__ENSG00000157837|ENST00000353487|SPPL3	REV__ENSG00000157837|ENST00000353487|SPPL3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2615661621094	2	428.27225	854.529947	-1.6657	-0.00071336	3.3449	0.0014325	1.6792	0.00071917	428.27330884666645	90.729	0.39117	90.947	90.826	91.217	0.21736					17	9	3	0	0	0	0.4196	1	9124	9124		24.504	5.144	1	428000	+		31124	20568	20571	20581	35516	35516					0.09686293041545468
LLLGPMVI	8	Unmodified	_LLLGPMVI_					0	0	0			REV__ENSG00000157837|ENST00000353487|SPPL3	REV__ENSG00000157837|ENST00000353487|SPPL3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2615966796875	2	428.27225	854.529947	-1.8497	-0.00079216	0.90249	0.00038651	-0.94717	-0.00040565	428.27243298196254	90.827	0.11946	91.007	90.919	91.038	0.18028					4	2	2	0	0	0	0.4196	1	9069	9069		33.493	13.011	1	224630	+		31125	20568	20571	20581	35517	35517					0.09686293041545468
LLLGPMVI	8	Unmodified	_LLLGPMVI_					0	0	0			REV__ENSG00000157837|ENST00000353487|SPPL3	REV__ENSG00000157837|ENST00000353487|SPPL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.26165771484375	2	428.27225	854.529947	-1.0664	-0.00045669	3.5286	0.0015112	2.4623	0.0010545	428.2734498836446	90.634	0.42531	91.105	90.816	91.241	0.47068					18	10	2	0	0	0	0.4196	1	10773	10773		33.493	8.989	1	428600	+		31126	20568	20571	20581	35518	35518					0.09686293041545468
LLLGPPGAS	9	Unmodified	_LLLGPPGAS_					0	0	0			REV__ENSG00000146360|ENST00000275169|GPR6	REV__ENSG00000146360|ENST00000275169|GPR6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7463073730469	2	412.747453	823.480354	-1.8202	-0.00075129	-0.83652	-0.00034527	-2.6567	-0.0010966	412.7469769415949	84.864	3.004	85.04	83.072	86.076	0.17561					129	69	4	0	0	0	0.78851	1	8245	8245		28.254	1.4582	1	1518200	+		31127	20008	20572	20582	35519	35519					0.06155301357091503
LLLGPPSVPIS	11	Unmodified	_LLLGPPSVPIS_					0	0	0		nc|ENSG00000080603|Q6ZRS2-3|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8403930664062	2	546.8368	1091.65905	1.265	0.00069175	4.2188	0.002307	5.4838	0.0029987	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.63176	1	10795	10795		40.778	10.46	1	39577000			31128	1447	20573	20583	35520	35520					0.11688346205323796
LLLGPRRARR	10	Unmodified	_LLLGPRRARR_					0	0	0			REV__ENST00000395863.7_1_20:55840810-55841128:-|nuORF	REV__ENST00000395863.7_1_20:55840810-55841128:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3663330078125	2	604.396548	1206.77854	1.047	0.00063282	-1.887	-0.0011405	-0.84001	-0.0005077	604.3956073320122	104.38	0.58817	104.55	104.38	104.97	0.17095					25	14	3	0	0	0	0.37624	1	11130	11130		16.473	2.336	1	526860	+		31129	26125	20574	20584	35521	35521					0.1834239739325767
LLLGPRRARR	10	Unmodified	_LLLGPRRARR_					0	0	0			REV__ENST00000395863.7_1_20:55840810-55841128:-|nuORF	REV__ENST00000395863.7_1_20:55840810-55841128:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3668212890625	2	604.396548	1206.77854	1.0459	0.00063216	2.6466	0.0015996	3.6925	0.0022317	604.3989094596363	105.09	0.39612	105.25	105	105.4	0.15924					12	9	2	0	0	0	0.37624	1	11205	11205		16.473	0	1	57709	+		31130	26125	20574	20584	35522	35522					0.1834239739325767
LLLGPVPKIYR	11	Unmodified	_LLLGPVPKIYR_					0	0	0			REV__ENSG00000165650|ENST00000334464|PDZD8	REV__ENSG00000165650|ENST00000334464|PDZD8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3760986328125	2	634.908091	1267.80163	1.4973	0.00095063	-2.1308	-0.0013528	-0.6335	-0.00040221	634.90672089716	112.26	0.28555	112.37	112.2	112.48	0.10638					15	10	2	0	0	0	0.17714	1	12078	12078		19.104	6.2918	1	514410	+		31131	21201	20575	20585	35523	35523					0.17843978667360716
LLLGPVRDQS	10	Unmodified	_LLLGPVRDQS_					0	0	0		ENST00000317623.8_2_14:60558690-60558942:+|nuORF	ENST00000317623.8_2_14:60558690-60558942:+|nuORF	ENST00000317623.8_2_14:60558690-60558942:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3175048828125	2	549.319306	1096.62406	0.23279	0.00012788	-3.323	-0.0018254	-3.0902	-0.0016975	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.86272	1	10515	10515		24.519	1.4767	1	3004300			31132	9996	20576	20586	35524	35524					0.0796110339738334
LLLGPVRDQS	10	Unmodified	_LLLGPVRDQS_					0	0	0		ENST00000317623.8_2_14:60558690-60558942:+|nuORF	ENST00000317623.8_2_14:60558690-60558942:+|nuORF	ENST00000317623.8_2_14:60558690-60558942:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3175048828125	2	549.319306	1096.62406	-1.4544	-0.00079891	-1.5897	-0.00087326	-3.0441	-0.0016722	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.8608	1	10494	10494		34.173	10.65	1	2310400			31133	9996	20576	20586	35525	35525					0.0796110339738334
LLLGQPLP	8	Unmodified	_LLLGQPLP_					0	0	0			REV__ENSG00000139914|ENST00000267426|FITM1	REV__ENSG00000139914|ENST00000267426|FITM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7746887207031	2	425.773471	849.53239	-0.27567	-0.00011737	3.7288	0.0015876	3.4531	0.0014702	425.77498181524743	38.327	1.6801	38.849	38.513	40.193	0.52235					122	39	5	0	0	0	0.82464	2	3157	3157;3181		39.021	0	1	16884000	+		31134	19581	20577	20587	35526;35527	35526					0.10160464770854105
LLLGQWPVRV	10	Unmodified	_LLLGQWPVRV_					0	0	0			REV__nc|ENSG00000079385|P13688-7|CEACAM1	REV__nc|ENSG00000079385|P13688-7|CEACAM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.866943359375	2	590.863683	1179.71281	3.2055	0.001894	2.0239	0.0011959	5.2294	0.0030899	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.86589	1	12604	12604		29.15	2.4566	1	6398400	+		31135	16782	20578	20588	35528	35528					0.13014563427691428
LLLGRAKV	8	Unmodified	_LLLGRAKV_					0	0	0			REV__chr12:56311111-56311211|26|31.31|0.0|21.58|-|2|None,CNPY2|2	REV__chr12:56311111-56311211|26|31.31|0.0|21.58|-|2|None,CNPY2|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3003234863281	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.86294	1	7080	7080		8.8223	0.59103	1	1702600	+		31136	15549	20579	20589	35529	35529					0.14627262273359065
LLLGRKFTG	9	Unmodified	_LLLGRKFTG_					0	0	0			REV__nc|ENSG00000176623|Q96DB5-3|RMDN1	REV__nc|ENSG00000176623|Q96DB5-3|RMDN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	502.81390380859375	2	502.816202	1003.61785	-0.77958	-0.00039198	-3.9123	-0.0019672	-4.6919	-0.0023592	502.8142607549554	97.648	3.8306	97.648	97.03	100.86	0					234	91	5	0	0	0	0.69914	4	9772	9772;9808;9820;9845		40.573	3.4135	1	9982600	+		31137	22139	20580	20590	35530;35531;35532;35533	35530					0.11618629956524273
LLLGRKFTG	9	Unmodified	_LLLGRKFTG_					0	0	0			REV__nc|ENSG00000176623|Q96DB5-3|RMDN1	REV__nc|ENSG00000176623|Q96DB5-3|RMDN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	502.8139953613281	2	502.816202	1003.61785	-1.6058	-0.00080742	-3.4199	-0.0017196	-5.0257	-0.002527	502.81450830567076	97.159	3.8746	97.361	96.791	100.67	0.20206					232	89	5	0	0	0	0.69914	1	10023	10023		40.573	3.4135	1	16341000	+		31138	22139	20580	20590	35534	35534					0.11618629956524273
LLLGRLTN	8	Unmodified	_LLLGRLTN_					0	0	0			REV__ENSG00000167972|ENST00000301732|ABCA3	REV__ENSG00000167972|ENST00000301732|ABCA3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.274169921875	2	450.287277	898.560001	1.6959	0.00076363	-3.1427	-0.0014151	-1.4468	-0.00065149	450.2847357149439	93.077	0.44652	93.016	92.72	93.167	-0.06144					23	10	3	0	0	0	0.4196	1	9868	9868		30.504	0	1	291680	+		31139	21442	20581	20591	35535	35535					0.10666368031070306
LLLGRTLTG	9	Unmodified	_LLLGRTLTG_					0	0	0		ENSG00000160326|ENST00000371899|SLC2A6;ENST00000485978.1_1_9:136338979-136343630:-|nuORF;nc|ENSG00000160326|Q9UGQ3-2|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2877502441406	2	472.300384	942.586216	-0.97045	-0.00045834	1.0796	0.00050988	0.10912	5.1538E-05	472.3009607696389	95.764	0.60197	95.764	95.357	95.959	0					17	13	3	0	0	0	0.20789	1	9565	9565		35.618	10.168	1	187520			31140	5582	20582	20592	35536	35536					0.11262637202571568
LLLGRTLTG	9	Unmodified	_LLLGRTLTG_					0	0	0		ENSG00000160326|ENST00000371899|SLC2A6;ENST00000485978.1_1_9:136338979-136343630:-|nuORF;nc|ENSG00000160326|Q9UGQ3-2|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2875061035156	2	472.300384	942.586216	-0.10808	-5.1044E-05	0.29373	0.00013873	0.18566	8.7685E-05	472.3007981287602	95.745	0.38007	95.811	95.671	96.051	0.06591					9	8	2	0	0	0	0.20789	1	10035	10035		27.882	6.9353	1	113150			31141	5582	20582	20592	35537	35537					0.11262637202571568
LLLGRTLTG	9	Unmodified	_LLLGRTLTG_					0	0	0		ENSG00000160326|ENST00000371899|SLC2A6;ENST00000485978.1_1_9:136338979-136343630:-|nuORF;nc|ENSG00000160326|Q9UGQ3-2|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2874755859375	2	472.300384	942.586216	-0.025327	-1.1962E-05	3.2456	0.0015329	3.2203	0.0015209	472.3028079562144	95.222	0.53124	95.269	95.006	95.537	0.046982					20	12	3	0	0	0	0.20789	1	10066	10066		38.806	5.2906	1	486100			31142	5582	20582	20592	35538	35538					0.11262637202571568
LLLGRVRWP	9	Unmodified	_LLLGRVRWP_					0	0	0		ENST00000419336.6_1_7:100491185-100491476:-|nuORF	ENST00000419336.6_1_7:100491185-100491476:-|nuORF	ENST00000419336.6_1_7:100491185-100491476:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.3531494140625	2	555.350743	1108.68693	1.3083	0.00072658	3.2077	0.0017814	4.516	0.002508	555.3524110053091	100.9	2.53	100.95	100.38	102.91	0.046356					182	60	5	0	0	0	0.7932	1	10871	10871		26.796	1.222	1	5418400			31143	11437	20583	20593	35539	35539					0.13693713976067556
LLLGRVRWP	9	Unmodified	_LLLGRVRWP_					0	0	0		ENST00000419336.6_1_7:100491185-100491476:-|nuORF	ENST00000419336.6_1_7:100491185-100491476:-|nuORF	ENST00000419336.6_1_7:100491185-100491476:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.35302734375	2	555.350743	1108.68693	0.32258	0.00017915	4.121	0.0022886	4.4436	0.0024677	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.7932	1	10556	10556		26.796	1.3459	1	7708500			31144	11437	20583	20593	35540	35540					0.13693713976067556
LLLGSLTHLPP	11	Unmodified	_LLLGSLTHLPP_					0	0	0			REV__ENST00000322038.5_2_18:72922772-72923027:+|nuORF	REV__ENST00000322038.5_2_18:72922772-72923027:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.8532104492188	2	580.855524	1159.69649	-1.3518	-0.00078519	-2.3509	-0.0013655	-3.7026	-0.0021507	580.854032927169	101.52	0.80199	101.68	101.28	102.08	0.15505					27	19	2	0	0	0	0.75495	1	10589	10589		20.947	0.95016	1	149680	+		31145	25020	20584	20594	35541	35541					0.12303437470950485
LLLGSRRE	8	Unmodified	_LLLGSRRE_					0	0	0		ENST00000445086.6_1_11:6500115-6502550:-|nuORF;ENST00000529847.1_1_11:6501462-6502550:-|nuORF	ENST00000445086.6_1_11:6500115-6502550:-|nuORF	ENST00000445086.6_1_11:6500115-6502550:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28765869140625	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.86288	1	9926	9926		26.796	0	1	48696000			31146	11819	20585	20595	35542	35542					0.0874858239999412
LLLGTELP	8	Unmodified	_LLLGTELP_					0	0	0		ENST00000417456.1_1_1:35441975-35442986:-|nuORF	ENST00000417456.1_1_1:35441975-35442986:-|nuORF	ENST00000417456.1_1_1:35441975-35442986:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2615966796875	2	428.262936	854.51132	-1.1356	-0.00048635	-1.7013	-0.00072859	-2.8369	-0.0012149	428.2621524287907	91.088	2.5476	91.088	90.477	93.025	0					222	59	5	0	0	0	0.82464	1	8964	8964		21.702	1.2205	1	33233000			31147	11410	20586	20596	35543	35543					0.0782445467133357
LLLGTELP	8	Unmodified	_LLLGTELP_					0	0	0		ENST00000417456.1_1_1:35441975-35442986:-|nuORF	ENST00000417456.1_1_1:35441975-35442986:-|nuORF	ENST00000417456.1_1_1:35441975-35442986:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2614440917969	2	428.262936	854.51132	1.4286	0.0006118	-4.4022	-0.0018853	-2.9736	-0.0012735	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.89457	1	9497	9497		37.028	1.8278	1	57042000			31148	11410	20586	20596	35544	35544					0.0782445467133357
LLLGTELP	8	Unmodified	_LLLGTELP_					0	0	0		ENST00000417456.1_1_1:35441975-35442986:-|nuORF	ENST00000417456.1_1_1:35441975-35442986:-|nuORF	ENST00000417456.1_1_1:35441975-35442986:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.26141357421875	2	428.262936	854.51132	0.64464	0.00027608	-3.646	-0.0015614	-3.0014	-0.0012854	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.87276	1	9079	9079		29.842	0	1	40631000			31149	11410	20586	20596	35545	35545					0.0782445467133357
LLLGTHLRIK	10	Unmodified	_LLLGTHLRIK_					0	0	0			REV__ENSG00000115760|ENST00000421745|BIRC6	REV__ENSG00000115760|ENST00000421745|BIRC6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353759765625	2	582.384783	1162.75501	3.1769	0.0018502	2.3507	0.001369	5.5275	0.0032191	582.3868484280275	103.46	0.28557	103.41	103.16	103.45	-0.043762					10	6	2	0	0	0	0.37624	1	11330	11330		35.618	14.671	1	227110	+		31150	18149	20587	20597	35546	35546					0.18014538836064276
LLLGTHLRIK	10	Unmodified	_LLLGTHLRIK_					0	0	0			REV__ENSG00000115760|ENST00000421745|BIRC6	REV__ENSG00000115760|ENST00000421745|BIRC6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353271484375	2	582.384783	1162.75501	3.1759	0.0018496	3.8134	0.0022209	6.9893	0.0040705	582.386923027915	103.91	0.16724	103.86	103.8	103.97	-0.043755					6	3	2	0	0	0	0.37624	1	11414	11414		27.882	12.24	1	104000	+		31151	18149	20587	20597	35547	35547					0.18014538836064276
LLLGTHLRIK	10	Unmodified	_LLLGTHLRIK_					0	0	0			REV__ENSG00000115760|ENST00000421745|BIRC6	REV__ENSG00000115760|ENST00000421745|BIRC6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533325195312	2	582.384783	1162.75501	0.17563	0.00010228	3.4181	0.0019906	3.5937	0.0020929	582.3867375207857	103.41	0.52034	103.45	103.4	103.92	0.041481					23	12	2	0	0	0	0.37624	1	11220	11220		34.173	23.307	1	379360	+		31152	18149	20587	20597	35548	35548					0.18014538836064276
LLLGTLLI	8	Unmodified	_LLLGTLLI_					0	0	0		nc|ENSG00000116678|P48357-2|LEPR;nc|ENSG00000116678|P48357-4|LEPR;nc|ENSG00000116678|P48357-3|LEPR;ENSG00000116678|ENST00000349533|LEPR;ENST00000471762.1_1_1:66085660-66088754:+|nuORF	nc|ENSG00000116678|P48357-2|LEPR	nc|ENSG00000116678|P48357-2|LEPR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.2616271972656	2	428.299322	854.584091	0.64455	0.00027606	-2.934	-0.0012566	-2.2894	-0.00098056	428.2977373502487	90.887	0.35123	91.041	90.759	91.111	0.15388					11	8	2	0	0	0	0.4196	1	9115	9115		23.037	7.4005	1	122240			31153	2932	20588	20598	35549	35549					0.15098208464758045
LLLGTLLI	8	Unmodified	_LLLGTLLI_					0	0	0		nc|ENSG00000116678|P48357-2|LEPR;nc|ENSG00000116678|P48357-4|LEPR;nc|ENSG00000116678|P48357-3|LEPR;ENSG00000116678|ENST00000349533|LEPR;ENST00000471762.1_1_1:66085660-66088754:+|nuORF	nc|ENSG00000116678|P48357-2|LEPR	nc|ENSG00000116678|P48357-2|LEPR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2615051269531	2	428.299322	854.584091	-1.0521	-0.00045062	1.3281	0.00056882	0.27596	0.00011819	428.30059402759593	90.614	0.67079	91.085	90.73	91.401	0.47068					19	16	2	0	0	0	0.4196	1	10761	10761		15.636	0	1	130910			31154	2932	20588	20598	35550	35550					0.15098208464758045
LLLGTLLI	8	Unmodified	_LLLGTLLI_					0	0	0		nc|ENSG00000116678|P48357-2|LEPR;nc|ENSG00000116678|P48357-4|LEPR;nc|ENSG00000116678|P48357-3|LEPR;ENSG00000116678|ENST00000349533|LEPR;ENST00000471762.1_1_1:66085660-66088754:+|nuORF	nc|ENSG00000116678|P48357-2|LEPR	nc|ENSG00000116678|P48357-2|LEPR	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	428.299322	854.584091	1.4321	0.00061336	-8.1643	-0.0034968	-6.7322	-0.0028834	428.29799226277794	90.992	0.43423	90.925	90.761	91.196	-0.067093	0.06462	-0.00024617	NaN	23.037	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116780			31155	2932	20588	20598							0.15098208464758045
LLLGTLLI	8	Unmodified	_LLLGTLLI_					0	0	0		nc|ENSG00000116678|P48357-2|LEPR;nc|ENSG00000116678|P48357-4|LEPR;nc|ENSG00000116678|P48357-3|LEPR;ENSG00000116678|ENST00000349533|LEPR;ENST00000471762.1_1_1:66085660-66088754:+|nuORF	nc|ENSG00000116678|P48357-2|LEPR	nc|ENSG00000116678|P48357-2|LEPR	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	428.299322	854.584091	2.6355	0.0011288	-6.1534	-0.0026355	-3.5179	-0.0015067	428.2968471182288	90.569	0.20216	90.615	90.432	90.634	0.046448	-0.24524	0.0014764	NaN	23.037	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54182			31156	2932	20588	20598							0.15098208464758045
LLLGTPLHLL	10	Unmodified	_LLLGTPLHLL_					0	0	0		ENST00000533005.5_1_11:67811756-67818283:+|nuORF;nc|ENSG00000110719|Q13488-2|TCIRG1;ENSG00000110719|ENST00000265686|TCIRG1	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.31689453125	2	545.35516	1088.69577	0.1523	8.3056E-05	1.7979	0.00098051	1.9502	0.0010636	545.3560872788204	90.314	0.16422	90.526	90.422	90.586	0.21271					5	3	2	0	0	0	0.37624	1	9034	9034		23.042	0	1	63031			31157	2537	20589	20599	35551	35551					0.1549664282190406
LLLGVLVE	8	Unmodified	_LLLGVLVE_					0	0	0		nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4;ENSG00000262576|ENST00000571252|PCDHGA4	nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4	nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.26153564453125	2	428.281129	854.547705	-1.6664	-0.00071367	-4.31	-0.0018459	-5.9764	-0.0025596	428.2793340613504	90.549	0.43645	90.767	90.468	90.905	0.21736					21	10	3	0	0	0	0.4196	1	9076	9076		29.842	0	1	371170			31158	8933	20590	20600	35552	35552					0.11461331568034439
LLLGVLVE	8	Unmodified	_LLLGVLVE_					0	0	0		nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4;ENSG00000262576|ENST00000571252|PCDHGA4	nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4	nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2615051269531	2	428.281129	854.547705	-1.0692	-0.00045792	1.5979	0.00068437	0.52875	0.00022646	428.28124461541125	90.52	0.34682	90.99	90.855	91.202	0.47068					11	8	2	0	0	0	0.4196	1	10785	10785		14.664	0	1	212700			31159	8933	20590	20600	35553	35553					0.11461331568034439
LLLGVRAAS	9	Unmodified	_LLLGVRAAS_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27447509765625	2	450.287277	898.560001	-0.14137	-6.3657E-05	2.7877	0.0012553	2.6463	0.0011916	450.28794387170376	93.125	0.45216	93.195	92.884	93.336	0.06987					17	10	2	0	0	0	0.20789	1	9627	9627		27.882	0	1	205890			31160	7477	20591	20601	35554	35554					0.10666368031081674
LLLGVRAASAE	11	Unmodified	_LLLGVRAASAE_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.3267211914062	2	550.327131	1098.63971	0.84562	0.00046537	-0.71285	-0.0003923	0.13278	7.307E-05	550.3267482489723	100.06	1.2234	100.21	99.636	100.86	0.15073					67	27	3	0	0	0	0.66929	1	10426	10426		36.447	3.6343	1	401350			31161	7477	20592	20602	35555	35555					0.09433389914420331
LLLGVVALLP	10	Unmodified	_LLLGVVALLP_					0	0	0		ENST00000262570.9_2_7:132766727-132766832:-|nuORF	ENST00000262570.9_2_7:132766727-132766832:-|nuORF	ENST00000262570.9_2_7:132766727-132766832:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34527587890625	2	504.346803	1006.67905	0.11336	5.7171E-05	-3.112	-0.0015695	-2.9987	-0.0015124	504.3451867946114	55.153	1.8423	55.554	54.023	55.866	0.40101					89	43	3	0	0	0	0.85976	1	5584	5584		35.201	0	1	1856800			31162	9445	20593	20603	35556	35556					0.17598141935934564
LLLHAKTHP	9	Unmodified	_LLLHAKTHP_					0	0	0			REV__ENSG00000112249|ENST00000369162|ASCC3	REV__ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3162841796875	2	515.313826	1028.6131	0.58613	0.00030204	4.358	0.0022457	4.9441	0.0025478	515.3156734656603	22.644	1.1835	22.034	21.745	22.928	-0.6107					52	28	3	0	0	0	0.7932	1	925	925		17.365	0.89182	1	271940	+		31163	17934	20594	20604	35557	35557					0.09993745813744681
LLLHFLLQLHH	11	Unmodified	_LLLHFLLQLHH_					0	0	0			REV__ENST00000592456.1_1_17:76167504-76168014:+|nuORF	REV__ENST00000592456.1_1_17:76167504-76168014:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.9483947753906	3	461.946835	1382.81868	0.76559	0.00035366	2.4458	0.0011298	3.2114	0.0014835	461.9479074956451	104.93	2.309	105.04	104.7	107.01	0.10766					127	56	3	0	0	0	0.78085	1	11155	11155		15.333	0.63944	1	1259300	+		31164	29213	20595	20605	35558	35558					0.14257899273184194
LLLHLAVLLFT	11	Unmodified	_LLLHLAVLLFT_					0	0	0			REV__ENST00000462410.5_1_1:211533229-211533703:+|nuORF	REV__ENST00000462410.5_1_1:211533229-211533703:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.92242431640625	3	418.272437	1251.79548	-1.7696	-0.00074017	3.568	0.0014924	1.7984	0.00075222	418.27361613474704	105.59	0.18735	105.75	105.66	105.84	0.15924					7	4	2	0	0	0	0.17863	1	11263	11263		19.263	11.863	1	218670	+		31165	27051	20596	20606	35559	35559					0.17965460435834757
LLLHSLIKVIC	11	Unmodified	_LLLHSLIKVIC_					0	0	0			REV__nc|ENSG00000176018|Q7Z3D4-3|LYSMD3	REV__nc|ENSG00000176018|Q7Z3D4-3|LYSMD3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.8881225585938	2	626.396502	1250.77845	-1.2035	-0.00075386	-0.24893	-0.00015593	-1.4524	-0.00090979	626.3968675549203	108.42	0.15453	108.44	108.34	108.5	0.020569					8	5	2	0	0	0	0.17243	1	11576	11576		2.9294	0	1	495640	+		31166	30049	20597	20607	35560	35560					0.16309216558420303
LLLIAQSA	8	Unmodified	_LLLIAQSA_					0	0	0			REV__nc|ENSG00000197617|Q7Z5H4|VN1R5	REV__nc|ENSG00000197617|Q7Z5H4|VN1R5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	414.7615661621094	2	414.763104	827.511654	-1.9066	-0.00079078	-1.3201	-0.00054751	-3.2266	-0.0013383	414.7625113918511	88.263	2.5091	88.432	87.911	90.42	0.16923					168	58	4	0	0	0	0.87276	1	8722	8722		29.842	0	1	7346500	+		31167	30140	20598	20608	35561	35561					0.09099874391188223
LLLIAQSA	8	Unmodified	_LLLIAQSA_					0	0	0			REV__nc|ENSG00000197617|Q7Z5H4|VN1R5	REV__nc|ENSG00000197617|Q7Z5H4|VN1R5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.7616882324219	2	414.763104	827.511654	-1.0998	-0.00045617	-2.0044	-0.00083134	-3.1042	-0.0012875	414.762210032181	88.155	2.0302	88.618	88.102	90.132	0.46312					152	49	4	0	0	0	0.87276	1	10409	10409		29.842	0	1	10243000	+		31168	30140	20598	20608	35562	35562					0.09099874391188223
LLLIDPKG	8	Unmodified	_LLLIDPKG_					0	0	0			REV__nc|ENSG00000179869|Q86UQ4|ABCA13	REV__nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3000183105469	2	434.778754	867.542954	0.25796	0.00011216	2.259	0.00098217	2.517	0.0010943	434.7799640075914	75.191	1.1387	75.755	74.845	75.984	0.56458					33	27	2	0	0	0	0.4196	1	8526	8526		31.955	6.5047	1	109670	+		31169	22360	20599	20609	35563	35563					0.10388447425293634
LLLIEGQLPP	10	Unmodified	_LLLIEGQLPP_					0	0	0		nc|ENSG00000085982|Q9NVE5|USP40;ENSG00000085982|ENST00000678225|USP40;nc|ENSG00000085982|Q9NVE5-3|USP40;nc|ENSG00000085982|Q9NVE5-2|USP40	nc|ENSG00000085982|Q9NVE5|USP40	nc|ENSG00000085982|Q9NVE5|USP40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8408203125	2	546.8368	1091.65905	1.265	0.00069175	4.2188	0.002307	5.4838	0.0029987	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.86589	1	11123	11123		29.15	2.3535	1	39577000			31170	1547	20600	20610	35564	35564					0.11688346205323796
LLLIFLLYI	9	Unmodified	_LLLIFLLYI_					0	0	0		chr2:187560873-187565550|14|20.43|0.0|20.96|-|2|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|19	chr2:187560873-187565550|14|20.43|0.0|20.96|-|2|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|19	chr2:187560873-187565550|14|20.43|0.0|20.96|-|2|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|19	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.314697265625	2	560.872654	1119.73076	1.1056	0.00062008	-1.1537	-0.00064708	-0.048141	-2.7001E-05	560.8709339368587	20.284	0.11785	20.214	20.108	20.226	-0.070013					5	4	2	0	0	0	0.20789	1	497	497		14.664	0	1	10962			31171	318	20601	20611	35565	35565					0.1756788562984184
LLLIIALLH	9	Unmodified	_LLLIIALLH_					0	0	0			REV__ENST00000594643.1_1_19:48893647-48894615:-|nuORF	REV__ENST00000594643.1_1_19:48893647-48894615:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8619689941406	2	509.854796	1017.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.771	1	61.771	61.271	62.271	0								0	0	0	0.35004	1	5411	5411		14.664	0	1		+		31172	17540	20602	20612	35566	35566					0.18689848172846268
LLLIMLIFLGH	11	Unmodified	_LLLIMLIFLGH_					0	0	0		nc|ENSG00000162706|Q8N126-3|CADM3;ENSG00000162706|ENST00000368125|CADM3;nc|ENSG00000162706|Q8N126-2|CADM3	nc|ENSG00000162706|Q8N126-3|CADM3	nc|ENSG00000162706|Q8N126-3|CADM3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.30279541015625	3	428.270039	1281.78829	0.40141	0.00017191	1.355	0.00058032	1.7564	0.00075223	428.27023159172296	63.973	0.48171	64.097	63.703	64.185	0.12397					24	18	2	0	0	0	0.17275	1	5598	5598		27.047	0.29761	1	99946			31173	5722	20603	20613	35567	35567					0.15866404563757897
LLLIPGEHKR	10	Unmodified	_LLLIPGEHKR_					0	0	0			REV__ENST00000460143.1_1_2:143676251-143715440:+|nuORF	REV__ENST00000460143.1_1_2:143676251-143715440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.0233154296875	2	588.36659	1174.71863	4.3714	0.002572	2.7854	0.0016388	7.1567	0.0042108	588.3697042622497	106.59	0.9057	106.74	106.23	107.14	0.14929					81	39	3	0	0	0	0.37624	1	13021	13021		2.3455	0	1	109930	+		31174	26997	20604	20614	35568	35568					0.13825661939381462
LLLIQFNNP	9	Unmodified	_LLLIQFNNP_					0	0	0			REV__ENSG00000187021|ENST00000358834|PNLIPRP1	REV__ENSG00000187021|ENST00000358834|PNLIPRP1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	537.28466796875	2	536.313492	1070.61243	-0.67866	-0.00036397	-2.3635	-0.0012676	-3.0421	-0.0016315	536.312214255126	92.753	1.4749	92.753	91.935	93.41	0					52	33	2	0	0	0	0.20789	1	9028	9028		23.042	14.349	1	49853	+		31175	22896	20605	20615	35569	35569					0.07994906374028687
LLLIQFNNP	9	Unmodified	_LLLIQFNNP_					0	0	0			REV__ENSG00000187021|ENST00000358834|PNLIPRP1	REV__ENSG00000187021|ENST00000358834|PNLIPRP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	536.313492	1070.61243	-0.10089	-5.4106E-05	-3.0524	-0.001637	-3.1532	-0.0016911	536.3120176823292	92.678	1.4317	92.748	92.025	93.457	0.06987	0.065407	-0.00055606	NaN	23.042	54	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59140	+		31176	22896	20605	20615							0.07994906374028687
LLLIQFNNP	9	Unmodified	_LLLIQFNNP_					0	0	0			REV__ENSG00000187021|ENST00000358834|PNLIPRP1	REV__ENSG00000187021|ENST00000358834|PNLIPRP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	536.313492	1070.61243	-1.4968	-0.00080274	-1.8548	-0.00099477	-3.3516	-0.0017975	536.3126267931278	92.36	1.3973	92.546	91.743	93.141	0.18582	-0.13651	0.00072844	NaN	23.042	54	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84127	+		31177	22896	20605	20615							0.07994906374028687
LLLIRLNQVM	10	Unmodified	_LLLIRLNQVM_					0	0	0			REV__ENST00000605777.1_1_17:41566885-41567849:+|nuORF	REV__ENST00000605777.1_1_17:41566885-41567849:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.92315673828125	3	404.921409	1211.7424	2.788	0.0011289	0.93176	0.00037729	3.7198	0.0015062	404.92169157251993	26.492	2.181	26.459	26.021	28.202	-0.032125					96	52	4	0	0	0	0.85285	1	1160	1160		16.717	1.3843	1	297020	+		31178	29362	20606	20616	35570	35570					0.14499759381533295
LLLIVAVLHER	11	Unmodified	_LLLIVAVLHER_					0	0	0			REV__ENST00000565181.1_1_15:72766821-72767304:-|nuORF	REV__ENST00000565181.1_1_15:72766821-72767304:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.5942687988281	3	425.943091	1274.80744	1.5417	0.00065668	-1.3495	-0.00057481	0.1922	8.1866E-05	426.27587965654936	33.24	0.41233	33.239	33.123	33.536	-0.0016365					11	8	2	0	0	0	0.17497	1	1961	1961		60.167	7.9998	1	15408	+		31179	28851	20607	20617	35571	35571					0.18103077179011962
LLLIVVIQV	9	Unmodified	_LLLIVVIQV_					0	0	0			REV__ENST00000237530.10_1_20:35869751-35869895:+|nuORF	REV__ENST00000237530.10_1_20:35869751-35869895:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3111572265625	2	505.354628	1008.6947	-0.24227	-0.00012243	-2.3615	-0.0011934	-2.6038	-0.0013158	505.35320143444875	49.872	0.50771	49.779	49.554	50.061	-0.093178					13	11	2	0	0	0	0.20789	1	3856	3856		16.473	3.514	1	60582	+		31180	24216	20608	20618	35572	35572					0.19070428452982924
LLLKERRER	9	Unmodified	_LLLKERRER_					0	0	0		ENST00000264010.8_1_16:67605120-67644919:+|nuORF	ENST00000264010.8_1_16:67605120-67644919:+|nuORF	ENST00000264010.8_1_16:67605120-67644919:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.9231262207031	3	404.922689	1211.74624	0.44862	0.00018165	0.063043	2.5527E-05	0.51166	0.00020718	404.92260093832465	26.168	1.321	26.213	25.795	27.116	0.045507					105	39	4	0	0	0	0.77696	1	1123	1123		31.53	7.0106	1	304530			31181	9473	20609	20619	35573	35573					0.14883565199602344
LLLKGLGR	8	Unmodified	_LLLKGLGR_					0	0	0		ENSG00000143315|ENST00000368090|PIGM	ENSG00000143315|ENST00000368090|PIGM	ENSG00000143315|ENST00000368090|PIGM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002624511719	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.86906	1	8148	8148		8.2313	0	1	5485100			31182	4615	20610	20620	35574	35574					0.14627262273381803
LLLKGLVG	8	Unmodified	_LLLKGLVG_					0	0	0		ENST00000339570.9_1_12:125262795-125262981:-|nuORF	ENST00000339570.9_1_12:125262795-125262981:-|nuORF	ENST00000339570.9_1_12:125262795-125262981:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78546142578125	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.719	1	30.831	30.331	31.331	0.11198								0	0	0	0.30784	1	1375	1375		14.664	0	1				31183	10226	20611	20621	35575	35575					0.1398105515053203
LLLKIRGG	8	Unmodified	_LLLKIRGG_					0	0	0		ENST00000524899.1_1_11:67052494-67052918:+|nuORF;ENST00000416281.6_1_11:67049840-67052918:+|nuORF;ENSG00000173020|ENST00000308595|GRK2	ENST00000524899.1_1_11:67052494-67052918:+|nuORF	ENST00000524899.1_1_11:67052494-67052918:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3003234863281	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.82419	1	6592	6592		13.775	0	1	1819800			31184	6818	20612	20622	35576	35576					0.14627262273370434
LLLKKSVSSEN	11	Unmodified	_LLLKKSVSSEN_					0	0	0		ENSG00000109686|ENST00000604030|SH3D19;nc|ENSG00000109686|Q5HYK7-3|SH3D19;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19	ENSG00000109686|ENST00000604030|SH3D19	ENSG00000109686|ENST00000604030|SH3D19	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	609.647216796875	2	609.358628	1216.7027	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.934	1	62.041	61.541	62.541	0.10743								0	0	0	0.56276	1	5388	5388		33.922	1.1092	1				31185	2477	20613	20623	35577	35577					0.10301910911834966
LLLKLRSPRLL	11	Unmodified	_LLLKLRSPRLL_					0	0	0			REV__ENST00000555988.1_2_14:75356010-75360059:+|nuORF	REV__ENST00000555988.1_2_14:75356010-75360059:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7876892089844	3	441.306252	1320.89693	-1.8762	-0.00082799	-1.7853	-0.00078787	-3.6615	-0.0016159	441.6400053781442	40.453	0.64772	40.453	39.972	40.619	0					24	18	2	0	0	0	0.18131	1	2624	2624		12.957	6.9564	1	90986	+		31186	28690	20614	20624	35578	35578					0.2493133185841998
LLLKLRSPRLL	11	Unmodified	_LLLKLRSPRLL_					0	0	0			REV__ENST00000555988.1_2_14:75356010-75360059:+|nuORF	REV__ENST00000555988.1_2_14:75356010-75360059:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7879638671875	3	441.306252	1320.89693	0.19231	8.4868E-05	-2.6506	-0.0011697	-2.4583	-0.0010848	441.30505423862303	39.698	1.2764	39.786	39.255	40.531	0.088375					50	35	2	0	0	0	0.17586	1	2482	2482		27.644	6.6117	1	142430	+		31187	28690	20614	20624	35579	35579					0.2493133185841998
LLLKLRSPRLL	11	Unmodified	_LLLKLRSPRLL_					0	0	0			REV__ENST00000555988.1_2_14:75356010-75360059:+|nuORF	REV__ENST00000555988.1_2_14:75356010-75360059:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.30352783203125	3	441.306252	1320.89693	-2.1764	-0.00096048	-1.3964	-0.00061626	-3.5729	-0.0015767	441.30559487402104	40.444	1.5264	40.836	39.711	41.237	0.39209					68	39	2	0	0	0	0.67762	3	3435	3435;3448;3461		35.178	5.0231	1	2797400	+		31188	28690	20614	20624	35580;35581;35582	35580					0.2493133185841998
LLLKLRSPRLL	11	Unmodified	_LLLKLRSPRLL_					0	0	0			REV__ENST00000555988.1_2_14:75356010-75360059:+|nuORF	REV__ENST00000555988.1_2_14:75356010-75360059:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7866516113281	3	441.306252	1320.89693	-2.1764	-0.00096048	-1.3964	-0.00061626	-3.5729	-0.0015767	441.30559487402104	40.444	1.5264	40.836	39.711	41.237	0.39209					68	39	2	0	0	0	0.17648	1	3397	3397		11.455	0	1	2797400	+		31189	28690	20614	20624	35583	35583					0.2493133185841998
LLLKMLYRN	9	Unmodified	_LLLKMLYRN_					0	0	0			REV__ENST00000477268.5_1_3:123667910-123680164:-|nuORF	REV__ENST00000477268.5_1_3:123667910-123680164:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3532104492188	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.14	1	118.12	117.62	118.62	-0.024208								0	0	0	0.31088	1	13084	13084		26.796	3.7536	1		+		31190	27354	20615	20625	35584	35584					0.11479801318751015
LLLKTPPLL	9	Unmodified	_LLLKTPPLL_					0	0	0			REV__ENST00000261401.7_1_12:109039947-109040256:-|nuORF	REV__ENST00000261401.7_1_12:109039947-109040256:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3525085449219	2	504.346803	1006.67905	-0.55637	-0.0002806	-2.161	-0.0010899	-2.7173	-0.0013705	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.7932	1	5790	5790		25.45	1.2474	1	1905800	+		31191	24387	20616	20626	35585	35585					0.175981419359573
LLLKVIKVH	9	Unmodified	_LLLKVIKVH_					0	0	0			REV__nc|ENSG00000132466|O75179-6|ANKRD17	REV__nc|ENSG00000132466|O75179-6|ANKRD17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3284301757812	2	531.87352	1061.73249	2.3599	0.0012551	-3.2526	-0.00173	-0.89278	-0.00047485	531.8718692801039	107.78	0.1039	107.89	107.83	107.93	0.10396					4	2	2	0	0	0	0.20789	1	13136	13136		1.0954	0	1	1223000	+		31192	19005	20617	20627	35586	35586					0.20408939438470952
LLLLAAQAAL	10	Unmodified	_LLLLAAQAAL_					0	0	0			REV__nc|ENSG00000177674|Q6RW13-4|AGTRAP	REV__nc|ENSG00000177674|Q6RW13-4|AGTRAP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	499.6489562988281	2	498.826235	995.637917	-0.66277	-0.00033061	-1.4298	-0.00071322	-2.0926	-0.0010438	498.82527774641517	16.03	0.23701	16.078	15.966	16.203	0.047804					15	10	2	0	0	0	0.37624	1	105	105		23.042	7.4007	1	34451	+		31193	30057	20618	20628	35587	35587					0.13992380896468148
LLLLALGH	8	Unmodified	_LLLLALGH_					0	0	0		ENSG00000183287|ENST00000439986|CCBE1	ENSG00000183287|ENST00000439986|CCBE1	ENSG00000183287|ENST00000439986|CCBE1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.2804260253906	2	425.281463	848.548374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.215	1	62.231	61.731	62.731	0.015724								0	0	0	0.30553	1	5425	5425		16.705	1.0687	1				31194	7517	20619	20629	35588	35588					0.11804171007747755
LLLLALLLP	9	Unmodified	_LLLLALLLP_					0	0	0		ENSG00000184471|ENST00000328449|C1QTNF8;ENSG00000272398|ENST00000606017|CD24;ENSG00000100290|ENST00000216115|BIK;nc|ENSG00000130283|P27539|GDF1	ENSG00000184471|ENST00000328449|C1QTNF8	ENSG00000184471|ENST00000328449|C1QTNF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.8498840332031	2	489.851722	977.68889	-0.69557	-0.00034072	-2.2193	-0.0010871	-2.9149	-0.0014279	489.8505520870745	75.016	0.59247	75.141	74.808	75.4	0.12545					25	14	2	0	0	0	0.78292	1	6943	6943		29.842	0	1	149480			31195	7616	20620	20630	35589	35589					0.19915329941329674
LLLLAPLLL	9	Unmodified	_LLLLAPLLL_					0	0	0		ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.8494873046875	2	489.851722	977.68889	-0.083177	-4.0744E-05	-2.5099	-0.0012295	-2.5931	-0.0012702	489.8503268265032	75.309	0.63388	75.355	75.039	75.673	0.045959					32	18	2	0	0	0	0.78292	2	7235	7218;7235		29.842	0	1	127780			31196	3954	20621	20631	35590;35591	35591					0.19915329941329674
LLLLAPLLL	9	Unmodified	_LLLLAPLLL_					0	0	0		ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.8506164550781	2	489.851722	977.68889	0.56048	0.00027455	-3.3092	-0.001621	-2.7487	-0.0013465	489.8499435094206	74.939	0.71374	75.071	74.863	75.577	0.13207					33	19	2	0	0	0	0.7932	2	6963	6963;6971		21.702	0	1	142460			31197	3954	20621	20631	35592;35593	35592					0.19915329941329674
LLLLAPLLL	9	Unmodified	_LLLLAPLLL_					0	0	0		ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.85064697265625	2	489.851722	977.68889	-0.13263	-6.4968E-05	-2.5974	-0.0012723	-2.73	-0.0013373	489.8502250369729	74.077	0.83626	74.636	74.326	75.162	0.55891					38	19	3	0	0	0	0.78292	1	8363	8363		29.842	0	1	373730			31198	3954	20621	20631	35594	35594					0.19915329941329674
LLLLAPLLL	9	Unmodified	_LLLLAPLLL_					0	0	0		ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	489.851722	977.68889	-0.69789	-0.00034186	-1.8804	-0.0009211	-2.5783	-0.001263	489.8506135621742	74.045	0.49883	74.172	73.93	74.429	0.12711	-0.22188	0.00039833	NaN	29.842	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82943			31199	3954	20621	20631							0.19915329941329674
LLLLAPLLL	9	Unmodified	_LLLLAPLLL_					0	0	0		ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	489.851722	977.68889	0.55165	0.00027023	-3.4071	-0.001669	-2.8554	-0.0013987	489.84997584738227	74.051	0.43523	74.182	73.937	74.372	0.13126	-0.21173	-0.0010974	NaN	29.842	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75833			31200	3954	20621	20631							0.19915329941329674
LLLLAPLLL	9	Unmodified	_LLLLAPLLL_					0	0	0		ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	489.851722	977.68889	-1.1593	-0.00056789	-1.2748	-0.00062446	-2.4341	-0.0011923	489.85090482257937	74.124	0.40247	74.21	74.077	74.48	0.085907	-0.18355	0.00099161	NaN	29.842	26	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89978			31201	3954	20621	20631							0.19915329941329674
LLLLAPPC	8	Unmodified	_LLLLAPPC_					0	0	0		ENST00000440671.2_1_9:82478423-82478885:+|nuORF	ENST00000440671.2_1_9:82478423-82478885:+|nuORF	ENST00000440671.2_1_9:82478423-82478885:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2566833496094	2	420.2566	838.498647	0.7339	0.00030843	-3.9716	-0.0016691	-3.2377	-0.0013606	420.25486417657544	111.77	0.49524	111.84	111.59	112.09	0.069534					26	14	2	0	0	0	0.88393	1	12045	12045		33.493	0	1	275090			31202	11774	20622	20632	35595	35595					0.07293720007442062
LLLLAPPC	8	Unmodified	_LLLLAPPC_					0	0	0		ENST00000440671.2_1_9:82478423-82478885:+|nuORF	ENST00000440671.2_1_9:82478423-82478885:+|nuORF	ENST00000440671.2_1_9:82478423-82478885:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	420.2566	838.498647	2.541	0.0010679	-5.714	-0.0024013	-3.173	-0.0013335	420.2542160777917	111.61	0.34906	111.65	111.46	111.81	0.041832	-0.095734	-0.00091575	NaN	33.493	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	232850			31203	11774	20622	20632							0.07293720007442062
LLLLAPQG	8	Unmodified	_LLLLAPQG_					0	0	0		ENST00000216237.9_1_22:41626710-41627022:+|nuORF	ENST00000216237.9_1_22:41626710-41627022:+|nuORF	ENST00000216237.9_1_22:41626710-41627022:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2674865722656	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.87276	1	2336	2336		29.842	0	1	1649400			31204	9130	20623	20633	35596	35596					0.09792178253815109
LLLLAPQG	8	Unmodified	_LLLLAPQG_					0	0	0		ENST00000216237.9_1_22:41626710-41627022:+|nuORF	ENST00000216237.9_1_22:41626710-41627022:+|nuORF	ENST00000216237.9_1_22:41626710-41627022:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7665710449219	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.87276	1	2814	2814		29.842	4.3914	1	818920			31205	9130	20623	20633	35597	35597					0.09792178253815109
LLLLCCQTM	9	Unmodified	_LLLLCCQTM_					0	0	0		chr4:24532991-24540108|13|13.62|0.79|4.11|-|0|None,DHX15|1	chr4:24532991-24540108|13|13.62|0.79|4.11|-|0|None,DHX15|1	chr4:24532991-24540108|13|13.62|0.79|4.11|-|0|None,DHX15|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.2767944335938	2	519.263242	1036.51193	-0.6105	-0.00031701	-2.0955	-0.0010881	-2.706	-0.0014051	519.2622869792818	72.69	0.62291	73.076	72.625	73.248	0.38581					17	14	2	0	0	0	0.20789	1	8137	8137		27.882	0	1	68622			31206	420	20624	20634	35598	35598					-0.004865332671442957
LLLLDKGGYK	10	Unmodified	_LLLLDKGGYK_					0	0	0			REV__ENSG00000183423|ENST00000594814|LRIT3	REV__ENSG00000183423|ENST00000594814|LRIT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.340576171875	2	560.342249	1118.66995	0.75729	0.00042434	-4.3961	-0.0024633	-3.6388	-0.002039	560.3396777082794	89.478	2.7427	89.63	87.684	90.427	0.1519					160	64	4	0	0	0	0.86218	1	8950	8950		32.812	1.2826	1	678500	+		31207	22605	20625	20635	35599	35599					0.11535748579603933
LLLLDKPIKK	10	Unmodified	_LLLLDKPIKK_					0	0	0			REV__ENST00000443322.1_1_7:66104212-66105443:+|nuORF	REV__ENST00000443322.1_1_7:66104212-66105443:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8671875	2	590.905017	1179.79548	-1.319	-0.00077942	3.0682	0.001813	1.7492	0.0010336	590.9066148172342	103.33	0.34878	103.44	103.19	103.54	0.11494					15	8	3	0	0	0	0.37624	1	10823	10823		29.15	0	1	407830	+		31208	26777	20626	20636	35600	35600					0.21277460435817375
LLLLDRRPRA	10	Unmodified	_LLLLDRRPRA_					0	0	0		ENST00000392432.6_1_3:194349154-194354092:-|nuORF	ENST00000392432.6_1_3:194349154-194354092:-|nuORF	ENST00000392432.6_1_3:194349154-194354092:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.93359375	3	408.262935	1221.76697	0.012696	5.1833E-06	-1.7249	-0.0007042	-1.7122	-0.00069902	408.2620116766015	16.36	0.25319	16.419	16.321	16.574	0.059267					16	10	2	0	0	0	0.37624	1	136	136		11.636	4.9763	1	92199			31209	11021	20627	20637	35601	35601					0.1649615557926154
LLLLEPGG	8	Unmodified	_LLLLEPGG_					0	0	0		ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2485046386719	2	406.249829	810.485105	-1.171	-0.0004757	-1.7314	-0.00070337	-2.9023	-0.0011791	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.83466	3	8532	8520;8532;8726		29.842	4.3914	1	30016000			31210	12509	20628	20638	35602;35603;35604	35603					0.07228185499855044
LLLLEPGG	8	Unmodified	_LLLLEPGG_					0	0	0		ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24847412109375	2	406.249829	810.485105	1.1516	0.00046786	-4.2235	-0.0017158	-3.0718	-0.0012479	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.83466	1	9166	9166		23.037	1.3344	1	58759000			31211	12509	20628	20638	35605	35605					0.07228185499855044
LLLLEPGG	8	Unmodified	_LLLLEPGG_					0	0	0		ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24853515625	2	406.249829	810.485105	1.4359	0.00058334	-3.9293	-0.0015963	-2.4934	-0.0010129	406.24811193904833	90.886	2.3214	90.819	90.264	92.586	-0.067085					123	55	4	0	0	0	0.87276	1	9535	9535		29.842	1.5873	1	1147600			31212	12509	20628	20638	35606	35606					0.07228185499855044
LLLLEPGG	8	Unmodified	_LLLLEPGG_					0	0	0		ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2481689453125	2	406.249829	810.485105	-1.8141	-0.00073698	-1.2967	-0.0005268	-3.1108	-0.0012638	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.80963	1	8910	8910		15.636	0	1	42617000			31213	12509	20628	20638	35607	35607					0.07228185499855044
LLLLEPGG	8	Unmodified	_LLLLEPGG_					0	0	0		ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2485046386719	2	406.249829	810.485105	0.62319	0.00025317	-3.6411	-0.0014792	-3.0179	-0.001226	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.83466	3	8785	8737;8785;8883		39.021	1.993	1	38001000			31214	12509	20628	20638	35608;35609;35610	35609					0.07228185499855044
LLLLEPGG	8	Unmodified	_LLLLEPGG_					0	0	0		ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2484436035156	2	406.249829	810.485105	0.73391	0.00029815	-3.7175	-0.0015102	-2.9836	-0.0012121	406.248260413121	111.47	0.7254	111.54	111.15	111.88	0.069542					33	24	2	0	0	0	0.82464	1	12000	12000		21.702	1.2205	1	102910			31215	12509	20628	20638	35611	35611					0.07228185499855044
LLLLEPGG	8	Unmodified	_LLLLEPGG_					0	0	0		ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.24847412109375	2	406.249829	810.485105	-1.9277	-0.00078311	-1.0996	-0.00044672	-3.0273	-0.0012298	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.83466	1	8721	8721		23.037	1.3344	1	31099000			31216	12509	20628	20638	35612	35612					0.07228185499855044
LLLLEPGG	8	Unmodified	_LLLLEPGG_					0	0	0		ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2479248046875	2	406.249829	810.485105	-1.9274	-0.00078302	-1.0619	-0.00043141	-2.9894	-0.0012144	406.2493147377016	111.43	0.80137	111.41	111.05	111.85	-0.019882					56	30	2	0	0	0	0.80963	1	11912	11912		15.636	1.8609	1	107510			31217	12509	20628	20638	35613	35613					0.07228185499855044
LLLLEPGG	8	Unmodified	_LLLLEPGG_					0	0	0		ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	ENST00000483330.1_1_7:43908587-43908701:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2486572265625	2	406.249829	810.485105	-1.235	-0.0005017	-1.7781	-0.00072233	-3.013	-0.001224	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.83466	2	10384	10384;10420		23.037	2.5549	1	38125000			31218	12509	20628	20638	35614;35615	35614					0.07228185499855044
LLLLFASG	8	Unmodified	_LLLLFASG_					0	0	0		ENST00000375254.7_1_1:19480380-19480428:-|nuORF	ENST00000375254.7_1_1:19480380-19480428:-|nuORF	ENST00000375254.7_1_1:19480380-19480428:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2572937011719	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.86791	1	605	605		28.254	5.2176	1	817900			31219	10794	20629	20639	35616	35616					0.08288775879520927
LLLLGFERA	9	Unmodified	_LLLLGFERA_					0	0	0			REV__ENST00000590307.1_1_18:77636237-77659813:+|nuORF	REV__ENST00000590307.1_1_18:77636237-77659813:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3134155273438	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12792	12792		23.042	2.0956	1	4038100	+		31220	22273	20630	20640	35617	35617					0.10343210236646883
LLLLGLPC	8	Unmodified	_LLLLGLPC_					0	0	0			REV__nc|ENSG00000142910|Q9GZM7-3|TINAGL1	REV__nc|ENSG00000142910|Q9GZM7-3|TINAGL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.2633056640625	2	421.264425	840.514297	0.041009	1.7276E-05	3.0852	0.0012997	3.1262	0.001317	421.2656511353515	76.084	0.6199	76.653	76.351	76.971	0.56836					25	14	2	0	0	0	0.84567	1	8662	8662		24.504	0	1	275170	+		31221	19760	20631	20641	35618	35618					0.08766006524490422
LLLLGLPC	8	Unmodified	_LLLLGLPC_					0	0	0			REV__nc|ENSG00000142910|Q9GZM7-3|TINAGL1	REV__nc|ENSG00000142910|Q9GZM7-3|TINAGL1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	421.264425	840.514297	0.64724	0.00027266	2.465	0.0010384	3.1122	0.0013111	421.26538963863794	76.249	0.66718	76.649	76.326	76.993	0.39969	-0.0018694	-0.0001909	NaN	24.504	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	283420	+		31222	19760	20631	20641							0.08766006524490422
LLLLGLPC	8	Unmodified	_LLLLGLPC_					0	0	0			REV__nc|ENSG00000142910|Q9GZM7-3|TINAGL1	REV__nc|ENSG00000142910|Q9GZM7-3|TINAGL1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	421.264425	840.514297	0.041009	1.7276E-05	3.0852	0.0012997	3.1262	0.001317	421.2656511353515	76.084	0.6199	76.653	76.351	76.971	0.56836	0.0018694	0.00033164	NaN	24.504	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	275170	+		31223	19760	20631	20641							0.08766006524490422
LLLLGQPP	8	Unmodified	_LLLLGQPP_					0	0	0		ENSG00000138131|ENST00000260702|LOXL4	ENSG00000138131|ENST00000260702|LOXL4	ENSG00000138131|ENST00000260702|LOXL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.77490234375	2	425.773471	849.53239	0.072338	3.08E-05	3.4421	0.0014656	3.5144	0.0014964	425.7748719136107	39.248	3.011	39.218	37.076	40.087	-0.03027					219	70	5	0	0	0	0.81724	3	2719	2719;2743;2755		28.254	5.2176	1	15142000			31224	4275	20632	20642	35619;35620;35621	35619					0.10160464770854105
LLLLGQPP	8	Unmodified	_LLLLGQPP_					0	0	0		ENSG00000138131|ENST00000260702|LOXL4	ENSG00000138131|ENST00000260702|LOXL4	ENSG00000138131|ENST00000260702|LOXL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	425.7749328613281	2	425.773471	849.53239	0.42545	0.00018115	3.0537	0.0013002	3.4791	0.0014813	425.7747050516017	38.994	1.8218	39.005	38.08	39.902	0.011173					147	42	5	0	0	0	0.81724	1	2747	2747		14.664	0	1	15234000			31225	4275	20632	20642	35622	35622					0.10160464770854105
LLLLGQPP	8	Unmodified	_LLLLGQPP_					0	0	0		ENSG00000138131|ENST00000260702|LOXL4	ENSG00000138131|ENST00000260702|LOXL4	ENSG00000138131|ENST00000260702|LOXL4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.7747497558594	2	425.773471	849.53239	0.17703	7.5374E-05	3.2935	0.0014023	3.4705	0.0014777	425.7747914132181	38.924	1.3455	39.012	38.418	39.764	0.088371					149	38	5	0	0	0	0.81724	1	2321	2321		14.664	0	1	14185000			31226	4275	20632	20642	35623	35623					0.10160464770854105
LLLLGSFA	8	Unmodified	_LLLLGSFA_					0	0	0			REV__ENST00000497135.5_1_9:126173862-126345492:-|nuORF	REV__ENST00000497135.5_1_9:126173862-126345492:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.2586975097656	2	417.260197	832.50584	-2.1518	-0.00089787	-1.6828	-0.00070218	-3.8346	-0.0016	417.25934690137603	21.231	2.6146	21.231	20.572	23.187	0					203	120	3	0	0	0	0.87276	1	560	560		29.842	1.5873	1	250530	+		31227	27763	20633	20643	35624	35624					0.08288775879520927
LLLLGSFA	8	Unmodified	_LLLLGSFA_					0	0	0			REV__ENST00000497135.5_1_9:126173862-126345492:-|nuORF	REV__ENST00000497135.5_1_9:126173862-126345492:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2583312988281	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.82464	2	532	524;532		35.201	6.9464	1	817900	+		31228	27763	20633	20643	35625;35626	35626					0.08288775879520927
LLLLGVLLGL	10	Unmodified	_LLLLGVLLGL_					0	0	0			REV__ENSG00000088827|ENST00000344754|SIGLEC1	REV__ENSG00000088827|ENST00000344754|SIGLEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.3606567382812	2	512.362453	1022.71035	-0.13841	-7.0915E-05	-2.2699	-0.001163	-2.4083	-0.0012339	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.85976	1	7396	7396		35.201	0	1	293160	+		31229	16948	20634	20644	35627	35627					0.1999071497003797
LLLLILIHIT	10	Unmodified	_LLLLILIHIT_					0	0	0			REV__ENSG00000224420|ENST00000420022|ADM5	REV__ENSG00000224420|ENST00000420022|ADM5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.9078979492188	2	581.40211	1160.78967	4.6157	0.0026836	0.040698	2.3662E-05	4.6564	0.0027072	581.4031270142407	109	0.5882	109.09	108.69	109.28	0.090057					61	26	3	0	0	0	0.91289	1	13277	13277		7.1934	0.45781	1	1567600	+		31230	23732	20635	20645	35628	35628					0.2157036192418218
LLLLIPNVL	9	Unmodified	_LLLLIPNVL_					0	0	0		ENSG00000163870|ENST00000355552|TPRA1;nc|ENSG00000163870|Q86W33-2|TPRA1;nc|ENSG00000163870|Q86W33-3|TPRA1	ENSG00000163870|ENST00000355552|TPRA1	ENSG00000163870|ENST00000355552|TPRA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3445129394531	2	504.346803	1006.67905	1.0557	0.00053246	-3.8818	-0.0019578	-2.8261	-0.0014253	504.3447732141236	56.244	2.3019	56.803	56.541	58.843	0.55954					121	55	3	0	0	0	0.7932	1	5805	5805		14.664	1.7049	1	1272700			31231	5874	20636	20646	35629	35629					0.17598141935934564
LLLLITSLIP	10	Unmodified	_LLLLITSLIP_					0	0	0			REV__ENSG00000075461|ENST00000262138|CACNG4	REV__ENSG00000075461|ENST00000262138|CACNG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3737182617188	2	548.373018	1094.73148	-0.014191	-7.7821E-06	2.2319	0.0012239	2.2178	0.0012162	548.374000997207	35.509	1.288	35.453	35.002	36.29	-0.055901					73	28	3	0	0	0	0.86452	1	2316	2316		30.504	1.3541	1	330260	+		31232	16711	20637	20647	35630	35630					0.18790680278902983
LLLLIVNPI	9	Unmodified	_LLLLIVNPI_					0	0	0		nc|ENSG00000133110|Q15063-7|POSTN;nc|ENSG00000133110|Q15063-6|POSTN;nc|ENSG00000133110|Q15063-4|POSTN;nc|ENSG00000133110|Q15063-10|POSTN;nc|ENSG00000133110|Q15063-2|POSTN;nc|ENSG00000133110|Q15063-3|POSTN;nc|ENSG00000133110|Q15063-9|POSTN;nc|ENSG00000133110|Q15063-8|POSTN;nc|ENSG00000133110|Q15063-5|POSTN;ENSG00000133110|ENST00000379747|POSTN	nc|ENSG00000133110|Q15063-7|POSTN	nc|ENSG00000133110|Q15063-7|POSTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3457946777344	2	504.346803	1006.67905	-0.55637	-0.0002806	-2.161	-0.0010899	-2.7173	-0.0013705	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.76402	1	5819	5819		35.201	8.4046	1	1905800			31233	3857	20638	20648	35631	35631					0.17598141935934564
LLLLKRSRIPI	11	Unmodified	_LLLLKRSRIPI_					0	0	0		ENSG00000253309|ENST00000681248|SERPINE3;nc|ENSG00000253309|A8MV23|SERPINE3	ENSG00000253309|ENST00000681248|SERPINE3	ENSG00000253309|ENST00000681248|SERPINE3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7872619628906	3	441.306252	1320.89693	-1.5138	-0.00066805	-1.3186	-0.0005819	-2.8324	-0.00125	441.640307357849	41.457	1.4502	41.462	41.132	42.582	0.0043983					60	39	2	0	0	0	0.17784	1	2667	2667		22.562	5.3948	1	219720			31234	8856	20639	20649	35632	35632					0.2493133185841998
LLLLKRSRIPI	11	Unmodified	_LLLLKRSRIPI_					0	0	0		ENSG00000253309|ENST00000681248|SERPINE3;nc|ENSG00000253309|A8MV23|SERPINE3	ENSG00000253309|ENST00000681248|SERPINE3	ENSG00000253309|ENST00000681248|SERPINE3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.3030700683594	3	441.306252	1320.89693	-1.2187	-0.00053781	-2.4418	-0.0010776	-3.6605	-0.0016154	441.3050786060834	40.296	1.5754	40.885	39.737	41.312	0.58915					94	39	4	0	0	0	0.74405	1	3448	3448		23.378	0	1	2778000			31235	8856	20639	20649	35633	35633					0.2493133185841998
LLLLLGALAL	10	Unmodified	_LLLLLGALAL_					0	0	0		ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000463348.5_1_6:30227401-30227711:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.35284423828125	2	505.354628	1008.6947	-0.37073	-0.00018735	-1.9133	-0.00096691	-2.284	-0.0011543	505.3536071882487	52.529	1.4494	52.953	52.638	54.087	0.42348					41	22	2	0	0	0	0.85976	2	5246	5246;5252		35.201	0	1	727160			31236	12060	20640	20650	35634;35635	35634					0.19070428452971555
LLLLLGLIDI	10	Unmodified	_LLLLLGLIDI_					0	0	0		ENSG00000173369|ENST00000509305|C1QB;nc|ENSG00000173369|P02746|C1QB	ENSG00000173369|ENST00000509305|C1QB	ENSG00000173369|ENST00000509305|C1QB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	548.3736572265625	2	548.373018	1094.73148	0.27438	0.00015046	2.33	0.0012777	2.6044	0.0014282	548.3741056570226	37.106	1.654	37.206	36.174	37.827	0.099277					123	52	3	0	0	0	0.91289	1	2032	2032		7.1934	0	1	393850			31237	6852	20641	20651	35636	35636					0.18790680278902983
LLLLLIKPG	9	Unmodified	_LLLLLIKPG_					0	0	0			REV__nc|ENSG00000130055|Q9HCC8-2|GDPD2	REV__nc|ENSG00000130055|Q9HCC8-2|GDPD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.8346862792969	2	490.349346	978.684139	-0.32692	-0.0001603	-2.4853	-0.0012187	-2.8122	-0.001379	490.3479551320456	68.671	1.5509	69.218	67.899	69.45	0.54693					50	36	2	0	0	0	0.20789	1	7559	7559		20.482	0	1	97623	+		31238	18846	20642	20652	35637	35637					0.19394445798559445
LLLLLIVNP	9	Unmodified	_LLLLLIVNP_					0	0	0		nc|ENSG00000133110|Q15063-7|POSTN;nc|ENSG00000133110|Q15063-6|POSTN;nc|ENSG00000133110|Q15063-4|POSTN;nc|ENSG00000133110|Q15063-10|POSTN;nc|ENSG00000133110|Q15063-2|POSTN;nc|ENSG00000133110|Q15063-3|POSTN;nc|ENSG00000133110|Q15063-9|POSTN;nc|ENSG00000133110|Q15063-8|POSTN;nc|ENSG00000133110|Q15063-5|POSTN;ENSG00000133110|ENST00000379747|POSTN	nc|ENSG00000133110|Q15063-7|POSTN	nc|ENSG00000133110|Q15063-7|POSTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.345458984375	2	504.346803	1006.67905	-0.55637	-0.0002806	-2.161	-0.0010899	-2.7173	-0.0013705	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.78851	2	5842	5741;5842		28.254	7.4361	1	1905800			31239	3857	20643	20653	35638;35639	35639					0.17598141935934564
LLLLLIVNP	9	Unmodified	_LLLLLIVNP_					0	0	0		nc|ENSG00000133110|Q15063-7|POSTN;nc|ENSG00000133110|Q15063-6|POSTN;nc|ENSG00000133110|Q15063-4|POSTN;nc|ENSG00000133110|Q15063-10|POSTN;nc|ENSG00000133110|Q15063-2|POSTN;nc|ENSG00000133110|Q15063-3|POSTN;nc|ENSG00000133110|Q15063-9|POSTN;nc|ENSG00000133110|Q15063-8|POSTN;nc|ENSG00000133110|Q15063-5|POSTN;ENSG00000133110|ENST00000379747|POSTN	nc|ENSG00000133110|Q15063-7|POSTN	nc|ENSG00000133110|Q15063-7|POSTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3453674316406	2	504.346803	1006.67905	0.37851	0.0001909	-3.3786	-0.001704	-3.0001	-0.0015131	504.3450503233635	54.756	1.9259	55.325	53.982	55.908	0.56836					89	45	3	0	0	0	0.76996	1	5580	5580		33.516	1.5607	1	1764400			31240	3857	20643	20653	35640	35640					0.17598141935934564
LLLLLLAAPA	10	Unmodified	_LLLLLLAAPA_					0	0	0		ENSG00000166033|ENST00000368984|HTRA1	ENSG00000166033|ENST00000368984|HTRA1	ENSG00000166033|ENST00000368984|HTRA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.34515380859375	2	504.346803	1006.67905	0.37851	0.0001909	-3.3786	-0.001704	-3.0001	-0.0015131	504.3450503233635	54.756	1.9259	55.325	53.982	55.908	0.56836					89	45	3	0	0	0	0.85108	2	5492	5476;5492		26.796	0	1	1764400			31241	6152	20644	20654	35641;35642	35642					0.17598141935923195
LLLLLLAPL	9	Unmodified	_LLLLLLAPL_					0	0	0		ENSG00000130309|ENST00000252599|COLGALT1;nc|ENSG00000204681|Q9UBS5-5|GABBR1;ENSG00000134757|ENST00000257189|DSG3;nc|ENSG00000204681|Q9UBS5-3|GABBR1;nc|ENSG00000204681|Q9UBS5-4|GABBR1;ENSG00000204681|ENST00000377034|GABBR1	ENSG00000130309|ENST00000252599|COLGALT1;ENSG00000134757|ENST00000257189|DSG3;nc|ENSG00000204681|Q9UBS5-3|GABBR1;REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7;REV__ENSG00000084674|ENST00000233242|APOB;REV__ENSG00000163956|ENST00000650182|LRPAP1	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.8411560058594	2	489.851722	977.68889	-1.187	-0.00058148	-1.6126	-0.00078995	-2.7997	-0.0013714	489.85075335195216	74.559	0.538	74.559	74.326	74.864	0					30	22	2	0	0	0	0.7932	1	6750	6750		14.664	0	1	48435			31242	16877;3636;3954;16482;21003;8477	20645	20655	35643	35643					0.19915329941306936
LLLLLLAPL	9	Unmodified	_LLLLLLAPL_					0	0	0		ENSG00000130309|ENST00000252599|COLGALT1;nc|ENSG00000204681|Q9UBS5-5|GABBR1;ENSG00000134757|ENST00000257189|DSG3;nc|ENSG00000204681|Q9UBS5-3|GABBR1;nc|ENSG00000204681|Q9UBS5-4|GABBR1;ENSG00000204681|ENST00000377034|GABBR1	ENSG00000130309|ENST00000252599|COLGALT1;ENSG00000134757|ENST00000257189|DSG3;nc|ENSG00000204681|Q9UBS5-3|GABBR1;REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7;REV__ENSG00000084674|ENST00000233242|APOB;REV__ENSG00000163956|ENST00000650182|LRPAP1	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.8501892089844	2	489.851722	977.68889	-0.69557	-0.00034072	-2.2193	-0.0010871	-2.9149	-0.0014279	489.8505520870745	75.016	0.59247	75.141	74.808	75.4	0.12545					25	14	2	0	0	0	0.78292	1	6970	6970		29.842	0	1	149480			31243	16877;3636;3954;16482;21003;8477	20645	20655	35644	35644					0.19915329941306936
LLLLLLGLVQL	11	Unmodified	_LLLLLLGLVQL_					0	0	0		ENSG00000155660|ENST00000652332|PDIA4	ENSG00000155660|ENST00000652332|PDIA4	ENSG00000155660|ENST00000652332|PDIA4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.4256591796875	2	604.423042	1206.83153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.78	1	108.87	108.37	109.37	0.090057								0	0	0	0.56276	1	13251	13251		6.3127	0	1				31244	5335	20646	20656	35645	35645					0.23638917612697696
LLLLLLIQLR	10	Unmodified	_LLLLLLIQLR_					0	0	0			REV__chr15:89585942-89592047|48|14.52|0.36|5.33|+|0|TICRR,TICRR|1	REV__chr15:89585942-89592047|48|14.52|0.36|5.33|+|0|TICRR,TICRR|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3663940429688	2	604.428659	1206.84277	-1.2751	-0.00077071	-4.4041	-0.002662	-5.6792	-0.0034327	604.4253401116589	104.94	0.3744	105.03	104.91	105.28	0.093857					9	8	2	0	0	0	0.37624	1	11096	11096		10.866	1.1599	1	41596	+		31245	15625	20647	20657	35646	35646					0.24761739706832486
LLLLLLKKV	9	Unmodified	_LLLLLLKKV_					0	0	0			REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.80859375	2	526.893921	1051.77329	2.1546	0.0011353	-3.9927	-0.0021037	-1.8381	-0.00096846	526.893207231641	100.62	0.23875	100.92	100.73	100.97	0.2999					7	5	2	0	0	0	0.20789	1	12184	12184		7.6903	0	1	68597	+		31246	18112	20648	20658	35647	35647					0.24947280758055967
LLLLLLLLAAW	11	Unmodified	_LLLLLLLLAAW_					0	0	0		nc|ENSG00000204967|Q9UN74-2|PCDHA4;chr5:140809572-140817231|43|11.05|0.0|20.08|+|ENST00000672575|PCDHA4,PCDHA4;ENSG00000204967|ENST00000530339|PCDHA4;ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8	nc|ENSG00000204967|Q9UN74-2|PCDHA4;ENSG00000204962|ENST00000531613|PCDHA8	ENSG00000204962|ENST00000531613|PCDHA8	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3795166015625	2	626.425585	1250.83662	-0.053101	-3.3264E-05	1.5065	0.00094373	1.4534	0.00091046	626.4259088384272	105.96	0.62789	105.96	105.59	106.22	0					19	14	2	0	0	0	0.17959	1	10975	10975		11.511	5.1984	1	91995			31247	8503;442	20649	20659	35648	35648					0.22123221475317223
LLLLLLLLAAW	11	Unmodified	_LLLLLLLLAAW_					0	0	0		nc|ENSG00000204967|Q9UN74-2|PCDHA4;chr5:140809572-140817231|43|11.05|0.0|20.08|+|ENST00000672575|PCDHA4,PCDHA4;ENSG00000204967|ENST00000530339|PCDHA4;ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8	nc|ENSG00000204967|Q9UN74-2|PCDHA4;ENSG00000204962|ENST00000531613|PCDHA8	ENSG00000204962|ENST00000531613|PCDHA8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3797607421875	2	626.425585	1250.83662	2.911	0.0018235	-3.9893	-0.002499	-1.0784	-0.00067552	626.423514211895	105.8	0.49705	105.76	105.32	105.82	-0.03714					15	11	2	0	0	0	0.1766	1	11660	11660		11.511	0	1	337730			31248	8503;442	20649	20659	35649	35649					0.22123221475317223
LLLLLLLLAAW	11	Unmodified	_LLLLLLLLAAW_					0	0	0		nc|ENSG00000204967|Q9UN74-2|PCDHA4;chr5:140809572-140817231|43|11.05|0.0|20.08|+|ENST00000672575|PCDHA4,PCDHA4;ENSG00000204967|ENST00000530339|PCDHA4;ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8	nc|ENSG00000204967|Q9UN74-2|PCDHA4;ENSG00000204962|ENST00000531613|PCDHA8	ENSG00000204962|ENST00000531613|PCDHA8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3798217773438	2	626.425585	1250.83662	0.93279	0.00058432	2.7449	0.0017195	3.6777	0.0023038	626.4257602969243	105.76	0.81606	105.8	105.21	106.03	0.038322					26	19	2	0	0	0	0.17378	1	11531	11531		24.203	6.8378	1	105910			31249	8503;442	20649	20659	35650	35650					0.22123221475317223
LLLLLLLLAAW	11	Unmodified	_LLLLLLLLAAW_					0	0	0		nc|ENSG00000204967|Q9UN74-2|PCDHA4;chr5:140809572-140817231|43|11.05|0.0|20.08|+|ENST00000672575|PCDHA4,PCDHA4;ENSG00000204967|ENST00000530339|PCDHA4;ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8	nc|ENSG00000204967|Q9UN74-2|PCDHA4;ENSG00000204962|ENST00000531613|PCDHA8	ENSG00000204962|ENST00000531613|PCDHA8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.37939453125	2	626.425585	1250.83662	0.92626	0.00058023	-2.3311	-0.0014603	-1.4049	-0.00088004	626.423639522543	105.94	0.354	106.04	105.87	106.23	0.099007					12	8	3	0	0	0	0.1766	1	11308	11308		6.7355	0	1	93691			31250	8503;442	20649	20659	35651	35651					0.22123221475317223
LLLLLLLLGAR	11	Unmodified	_LLLLLLLLGAR_					0	0	0			REV__ENSG00000184992|ENST00000341446|BRI3BP	REV__ENSG00000184992|ENST00000341446|BRI3BP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3665771484375	2	604.428659	1206.84277	-1.275	-0.00077067	-0.14938	-9.0292E-05	-1.4244	-0.00086096	604.4282257818197	104.54	0.58949	104.63	104.36	104.95	0.093857					23	14	2	0	0	0	0.17806	1	11048	11048		10.265	0	1	253120	+		31251	22721	20650	20660	35652	35652					0.24761739706832486
LLLLLLLLLRS	11	Unmodified	_LLLLLLLLLRS_					0	0	0			REV__nc|ENSG00000129214|P04278-4|SHBG	REV__nc|ENSG00000129214|P04278-4|SHBG	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.4442138671875	2	640.457416	1278.90028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.197	1	51.112	50.612	51.612	-0.084538								0	0	0	0.56276	1	4068	4068		10.265	3.0719	1		+		31252	18811	20651	20661	35653	35653					0.27198581912421105
LLLLLLLLTQP	11	Unmodified	_LLLLLLLLTQP_					0	0	0		ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2901306152344	3	417.287975	1248.8421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.98	1	72.02	71.52	72.52	0.040222								0	0	0	0.56276	1	6916	6916		28.577	10.744	1				31253	3416	20652	20662	35654	35654					0.22762900267116493
LLLLLLLLTQP	11	Unmodified	_LLLLLLLLTQP_					0	0	0		ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2906799316406	3	417.287975	1248.8421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.523	1	72.565	72.065	73.065	0.042114								0	0	0	0.56276	1	6980	6980		15.333	3.6972	1				31254	3416	20652	20662	35655	35655					0.22762900267116493
LLLLLLLLTQP	11	Unmodified	_LLLLLLLLTQP_					0	0	0		ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2888488769531	3	417.287975	1248.8421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.714	1	72.756	72.256	73.256	0.042114								0	0	0	0.56276	1	7005	7005		13.508	6.1082	1				31255	3416	20652	20662	35656	35656					0.22762900267116493
LLLLLLLLTQP	11	Unmodified	_LLLLLLLLTQP_					0	0	0		ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	625.4306030273438	2	625.428325	1248.8421	0.92485	0.00057843	4.2025	0.0026284	5.1274	0.0032068	625.4306858418821	108.95	0.54751	109.03	108.69	109.24	0.078552					43	24	2	0	0	0	0.80516	1	11722	11722		10.265	6.8552	1	929680			31256	3416	20652	20662	35657	35657					0.22762900267116493
LLLLLLLLVSW	11	Unmodified	_LLLLLLLLVSW_					0	0	0		ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000064601|P10619-2|CTSA	ENSG00000064601|ENST00000646241|CTSA	ENSG00000064601|ENST00000646241|CTSA	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3928833007812	2	648.438692	1294.86283	0.024148	1.5658E-05	2.1284	0.0013802	2.1526	0.0013958	648.4394474296656	107.55	0.36929	107.55	107.28	107.65	0					13	8	2	0	0	0	0.17289	1	11191	11191		21.96	4.5949	1	85297			31257	1105	20653	20663	35658	35658					0.22719490646795748
LLLLLLLPA	9	Unmodified	_LLLLLLLPA_					0	0	0		ENSG00000137161|ENST00000372836|CNPY3;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENST00000498308.1_1_7:5111828-5112677:+|nuORF;ENST00000396904.2_2_7:5097383-5112677:+|nuORF	ENSG00000137161|ENST00000372836|CNPY3;REV__ENSG00000092758|ENST00000649368|COL9A3;REV__nc|ENSG00000143590|P52797-2|EFNA3;REV__ENSG00000181790|ENST00000517894|ADGRB1	ENSG00000137161|ENST00000372836|CNPY3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.85064697265625	2	489.851722	977.68889	-0.25031	-0.00012261	-2.5156	-0.0012323	-2.7659	-0.0013549	489.85032598388403	75.262	0.55761	75.216	74.93	75.488	-0.045982					25	14	2	0	0	0	0.7932	1	7421	7421		21.702	0	1	125980			31258	4175;17037;19824;22479	20654	20664	35659	35659					0.19915329941318305
LLLLLLLPPA	10	Unmodified	_LLLLLLLPPA_					0	0	0		ENSG00000161610|ENST00000293330|HCRT	ENSG00000161610|ENST00000293330|HCRT	ENSG00000161610|ENST00000293330|HCRT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267822265625	2	538.378103	1074.74165	3.439	0.0018515	-2.803	-0.0015091	0.63595	0.00034238	538.375522491322	101.27	0.24281	101.22	101.04	101.28	-0.049828					7	5	2	0	0	0	0.37624	1	11013	11013		12.959	5.2689	1	107670			31259	5644	20655	20665	35660	35660					0.2072728800412733
LLLLLLPAAA	10	Unmodified	_LLLLLLPAAA_					0	0	0			REV__nc|ENSG00000143590|P52797-2|EFNA3	REV__nc|ENSG00000143590|P52797-2|EFNA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3451843261719	2	504.346803	1006.67905	0.37851	0.0001909	-3.3786	-0.001704	-3.0001	-0.0015131	504.3450503233635	54.756	1.9259	55.325	53.982	55.908	0.56836					89	45	3	0	0	0	0.86786	1	5610	5610		26.796	0	1	1764400	+		31260	19824	20656	20666	35661	35661					0.17598141935923195
LLLLLLPSPT	10	Unmodified	_LLLLLLPSPT_					0	0	0			REV__ENSG00000127418|ENST00000510644|FGFRL1	REV__ENSG00000127418|ENST00000510644|FGFRL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.8605346679688	2	540.357368	1078.70018	-0.09847	-5.3209E-05	2.5238	0.0013637	2.4253	0.0013105	540.3585531343375	36.951	1.7168	36.927	36.371	38.088	-0.023979					87	38	3	0	0	0	0.88945	1	2358	2358		10.866	0	1	433100	+		31261	18734	20657	20667	35662	35662					0.16398107244799576
LLLLLLPSPT	10	Unmodified	_LLLLLLPSPT_					0	0	0			REV__ENSG00000127418|ENST00000510644|FGFRL1	REV__ENSG00000127418|ENST00000510644|FGFRL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.8614501953125	2	540.357368	1078.70018	-0.017297	-9.3466E-06	2.5708	0.0013891	2.5535	0.0013798	540.3585627881598	36.881	1.2861	36.905	36.409	37.695	0.023624					76	34	3	0	0	0	0.85438	1	2026	2026		16.473	6.2079	1	515190	+		31262	18734	20657	20667	35663	35663					0.16398107244799576
LLLLLLSP	8	Unmodified	_LLLLLLSP_					0	0	0		nc|ENSG00000088812|O75882-2|ATRN;ENST00000394166.7_1_15:96874038-96874248:+|nuORF;ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3;ENSG00000184709|ENST00000371542|LRRC26;ENSG00000166450|ENST00000389286|PRTG;ENSG00000088812|ENST00000262919|ATRN;ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENSG00000153246|ENST00000283243|PLA2R1;REV__ENSG00000204301|ENST00000375023|NOTCH4;REV__ENSG00000125730|ENST00000245907|C3;REV__ENSG00000244486|ENST00000622235|SCARF2;ENSG00000198753|ENST00000361971|PLXNB3;ENSG00000184709|ENST00000371542|LRRC26;ENSG00000166450|ENST00000389286|PRTG;ENSG00000088812|ENST00000262919|ATRN;ENST00000479510.2_1_6:33387852-33406697:+|nuORF;REV__ENSG00000069764|ENST00000438167|PLA2G10	REV__ENSG00000204301|ENST00000375023|NOTCH4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7879943847656	2	441.307147	880.599741	-1.3622	-0.00060117	-3.3915	-0.0014967	-4.7538	-0.0020979	441.30675701730644	39.195	0.12963	39.563	39.471	39.6	0.36797					4	2	2	0	0	0	0.4196	1	3266	3266		8.2313	0	1	19545		+	31263	20341;23479;8322;18661;23851;6198;7640;1595;12408;16586	20658	20668	35664	35664					0.1546649498179704
LLLLLLSPPPL	11	Unmodified	_LLLLLLSPPPL_					0	0	0		ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	594.9048461914062	2	594.901943	1187.78933	3.3319	0.0019821	2.8875	0.0017178	6.2194	0.0036999	594.9034872366265	108.87	0.57749	108.84	108.61	109.19	-0.029381					46	23	3	0	0	0	0.77937	1	12085	12085		15.642	5.3766	1	1558200			31264	8322	20659	20669	35665	35665					0.20294942204327526
LLLLLLSPPPL	11	Unmodified	_LLLLLLSPPPL_					0	0	0		ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	594.901943	1187.78933	-0.57964	-0.00034483	6.9755	0.0041497	6.3959	0.0038049	594.9058359149159	108.88	0.56851	108.92	108.65	109.22	0.034363	-0.0029467	0.0023087	NaN	15.642	61	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1743300			31265	8322	20659	20669							0.20294942204327526
LLLLLLSPPPL	11	Unmodified	_LLLLLLSPPPL_					0	0	0		ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	594.901943	1187.78933	0.89523	0.00053258	5.8518	0.0034812	6.747	0.0040138	594.9053396031792	108.89	0.44585	108.97	108.76	109.2	0.078552	0.051176	0.00097173	NaN	15.642	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	579860			31266	8322	20659	20669							0.20294942204327526
LLLLLLSPPPL	11	Unmodified	_LLLLLLSPPPL_					0	0	0		ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	594.901943	1187.78933	-1.306	-0.00077697	7.7069	0.0045849	6.4009	0.0038079	594.906309421953	108.87	0.45715	108.89	108.65	109.11	0.020561	-0.034992	0.003179	NaN	15.642	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	682600			31267	8322	20659	20669							0.20294942204327526
LLLLLLSPPPL	11	Unmodified	_LLLLLLSPPPL_					0	0	0		ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	594.901943	1187.78933	5.0521	0.0030055	1.4892	0.00088591	6.5413	0.0038914	594.9027636976381	108.9	0.49088	108.99	108.79	109.28	0.090057	0.06568	-0.0042189	NaN	15.642	39	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1014200			31268	8322	20659	20669							0.20294942204327526
LLLLLLVF	8	Unmodified	_LLLLLLVF_					0	0	0		nc|ENSG00000119777|Q6NUQ4-2|TMEM214;ENSG00000119777|ENST00000238788|TMEM214;nc|ENSG00000124783|P43307-2|SSR1;ENSG00000124783|ENST00000244763|SSR1;ENST00000483409.1_1_6:7303794-7313353:-|nuORF;ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2	nc|ENSG00000119777|Q6NUQ4-2|TMEM214;REV__ENSG00000134256|ENST00000682167|CD101;ENST00000483409.1_1_6:7303794-7313353:-|nuORF;ENSG00000148219|ENST00000313400|ASTN2	nc|ENSG00000119777|Q6NUQ4-2|TMEM214	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28759765625	2	472.333165	942.651776	-0.9185	-0.00043384	-1.4417	-0.00068094	-2.3601	-0.0011148	472.3324165442047	94.897	0.20403	95.128	94.984	95.188	0.23103					7	4	2	0	0	0	0.4196	1	9700	9700		10.185	0	1	98022			31269	3095;4940;19126;12511	20660	20670	35666	35666					0.17815658395556966
LLLLLPLAL	9	Unmodified	_LLLLLPLAL_					0	0	0			REV__ENSG00000166482|ENST00000299610|MFAP4	REV__ENSG00000166482|ENST00000299610|MFAP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.8498229980469	2	489.851722	977.68889	-1.187	-0.00058148	-1.6126	-0.00078995	-2.7997	-0.0013714	489.85075335195216	74.559	0.538	74.559	74.326	74.864	0					30	22	2	0	0	0	0.7932	1	6747	6747		8.8223	0	1	48435	+		31270	21298	20661	20671	35667	35667					0.19915329941306936
LLLLLPLAL	9	Unmodified	_LLLLLPLAL_					0	0	0			REV__ENSG00000166482|ENST00000299610|MFAP4	REV__ENSG00000166482|ENST00000299610|MFAP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.8503723144531	2	489.851722	977.68889	-0.83844	-0.00041071	-1.877	-0.00091947	-2.7155	-0.0013302	489.85063205499284	74.212	1.0245	74.603	74.334	75.358	0.3911					35	24	3	0	0	0	0.7932	1	8353	8353		21.702	0	1	428000	+		31271	21298	20661	20671	35668	35668					0.19915329941306936
LLLLLPLLA	9	Unmodified	_LLLLLPLLA_					0	0	0		ENSG00000149930|ENST00000308893|TAOK2;nc|ENSG00000149930|Q9UL54-3|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2;ENSG00000184232|ENST00000328965|OAF;nc|ENSG00000231852|P08686-2|CYP21A2;ENSG00000231852|ENST00000644719|CYP21A2;nc|ENSG00000132470|P16144-4|ITGB4;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;ENSG00000132470|ENST00000200181|ITGB4;ENST00000580542.5_1_17:73720783-73737087:+|nuORF;nc|ENSG00000132470|P16144-5|ITGB4	ENSG00000149930|ENST00000308893|TAOK2;nc|ENSG00000231852|P08686-2|CYP21A2;nc|ENSG00000132470|P16144-4|ITGB4	ENSG00000149930|ENST00000308893|TAOK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.8500061035156	2	489.851722	977.68889	-0.69557	-0.00034072	-2.2193	-0.0010871	-2.9149	-0.0014279	489.8505520870745	75.016	0.59247	75.141	74.808	75.4	0.12545					25	14	2	0	0	0	0.7932	1	6959	6959		21.702	0	1	149480			31272	5055;3798;8736	20662	20672	35669	35669					0.19915329941318305
LLLLLPLLWGT	11	Unmodified	_LLLLLPLLWGT_					0	0	0		nc|ENSG00000105366|Q9NYZ4-2|SIGLEC8;nc|ENSG00000105366|Q9NYZ4-3|SIGLEC8;ENSG00000105366|ENST00000321424|SIGLEC8	nc|ENSG00000105366|Q9NYZ4-2|SIGLEC8	nc|ENSG00000105366|Q9NYZ4-2|SIGLEC8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3795776367188	2	626.407392	1250.80023	1.3765	0.00086225	-3.0001	-0.0018793	-1.6236	-0.001017	626.9067809512588	105.1	0.20061	105.26	105.09	105.29	0.15925					9	4	3	0	0	0	0.17478	1	11173	11173		15.642	0	1	358090			31273	2208	20663	20673	35670	35670					0.18486344578582248
LLLLLPRDAPL	11	Unmodified	_LLLLLPRDAPL_					0	0	0			REV__ENST00000366592.7_2_1:236306173-236341839:+|nuORF	REV__ENST00000366592.7_2_1:236306173-236341839:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	617.4027099609375	2	617.400099	1232.78564	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.707	1	15.707	15.207	16.207	0								0	0	0	0.56276	1	59	59		19.997	7.1851	1		+		31274	25527	20664	20674	35671	35671					0.17856272430458375
LLLLLPSILSQ	11	Unmodified	_LLLLLPSILSQ_					0	0	0			REV__ENST00000541507.1_12:9094188-9094401:-|nuORF	REV__ENST00000541507.1_12:9094188-9094401:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.9293212890625	3	403.93208	1208.77441	-1.7749	-0.00071695	-4.2542	-0.0017184	-6.0291	-0.0024354	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.77803	1	3751	3751		15.921	1.8346	1	2526100	+		31275	28485	20665	20675	35672	35672					0.1783745033633295
LLLLLTGDV	9	Unmodified	_LLLLLTGDV_					0	0	0			REV__ENST00000484194.1_1_6:30457308-30457777:+|nuORF	REV__ENST00000484194.1_1_6:30457308-30457777:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.8045959472656	2	478.804968	955.595384	-1.5052	-0.00072068	2.5191	0.0012062	1.0139	0.00048547	478.80603662682483	40.745	0.82938	41.137	40.796	41.625	0.39209					62	23	3	0	0	0	0.77546	1	3544	3544		31.955	0	1	3674000	+		31276	23508	20666	20676	35673	35673					0.11580985768239316
LLLLLVLGLE	10	Unmodified	_LLLLLVLGLE_					0	0	0			REV__nc|ENSG00000144455|Q8NBK3-4|SUMF1	REV__nc|ENSG00000144455|Q8NBK3-4|SUMF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3726196289062	2	548.373018	1094.73148	-1.4258	-0.00078185	3.8141	0.0020915	2.3883	0.0013097	548.3749403834641	37.356	2.5025	37.356	35.98	38.483	0					111	59	3	0	0	0	0.88106	1	2117	2117		12.207	0	1	203100	+		31277	19891	20667	20677	35674	35674					0.18790680278902983
LLLLLYTY	8	Unmodified	_LLLLLYTY_					0	0	0			REV__nc|ENSG00000227191|P03986|TRGC2	REV__nc|ENSG00000227191|P03986|TRGC2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3077392578125	2	506.309887	1010.60522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.646	1	43.654	43.154	44.154	0.0075836								0	0	0	0.29871	1	3023	3023		23.037	1.0768	1		+		31278	30213	20668	20678	35675	35675					0.10034173773601651
LLLLLYTY	8	Unmodified	_LLLLLYTY_					0	0	0			REV__nc|ENSG00000227191|P03986|TRGC2	REV__nc|ENSG00000227191|P03986|TRGC2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3083190917969	2	506.309887	1010.60522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.687	1	54.778	54.278	55.278	0.091167								0	0	0	0.30004	1	4538	4538		21.702	0.7554	1		+		31279	30213	20668	20678	35676	35676					0.10034173773601651
LLLLLYTY	8	Unmodified	_LLLLLYTY_					0	0	0			REV__nc|ENSG00000227191|P03986|TRGC2	REV__nc|ENSG00000227191|P03986|TRGC2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.311279296875	2	506.309887	1010.60522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.939	1	61.058	60.558	61.558	0.11901								0	0	0	0.29199	1	5302	5302		29.842	5.6388	1		+		31280	30213	20668	20678	35677	35677					0.10034173773601651
LLLLNMTGN	9	Unmodified	_LLLLNMTGN_					0	0	0			REV__ENST00000373731.6_1_6:36442658-36442763:+|nuORF	REV__ENST00000373731.6_1_6:36442658-36442763:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.78009033203125	2	494.778428	987.542302	-0.074951	-3.7084E-05	4.0919	0.0020246	4.017	0.0019875	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.74721	1	8724	8724		37.159	3.6435	1	651380	+		31281	25769	20669	20679	35678	35678					0.0480328471392113
LLLLNSAP	8	Unmodified	_LLLLNSAP_					0	0	0			REV__ENST00000262919.9_1_20:3627575-3627716:+|nuORF	REV__ENST00000262919.9_1_20:3627575-3627716:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.7035827636719	2	420.763104	839.511654	1.3362	0.00056222	2.4857	0.0010459	3.8219	0.0016081	420.76395179187153	35.627	1.5239	35.637	34.865	36.389	0.0092773					56	34	2	0	0	0	0.4196	1	2295	2295		53.351	5.4358	1	49070	+		31282	24434	20670	20680	35679	35679					0.08547874391183541
LLLLNSAP	8	Unmodified	_LLLLNSAP_					0	0	0			REV__ENST00000262919.9_1_20:3627575-3627716:+|nuORF	REV__ENST00000262919.9_1_20:3627575-3627716:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	420.763104	839.511654	-1.9431	-0.00081758	5.7939	0.0024379	3.8508	0.0016203	420.76533728377876	35.78	1.0626	35.78	35.407	36.469	0	0.10625	0.0014517	NaN	53.351	39	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44220	+		31283	24434	20670	20680							0.08547874391183541
LLLLNSAP	8	Unmodified	_LLLLNSAP_					0	0	0			REV__ENST00000262919.9_1_20:3627575-3627716:+|nuORF	REV__ENST00000262919.9_1_20:3627575-3627716:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	420.763104	839.511654	-0.79378	-0.00033399	4.5425	0.0019113	3.7487	0.0015773	420.7648222024776	35.713	1.5114	35.657	35.002	36.513	-0.055901	-0.016505	0.00039863	NaN	53.351	46	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46174	+		31284	24434	20670	20680							0.08547874391183541
LLLLNSAP	8	Unmodified	_LLLLNSAP_					0	0	0			REV__ENST00000262919.9_1_20:3627575-3627716:+|nuORF	REV__ENST00000262919.9_1_20:3627575-3627716:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	420.763104	839.511654	-1.8672	-0.00078565	5.8209	0.0024492	3.9537	0.0016636	420.765434436865	35.795	0.90787	35.827	35.284	36.192	0.031132	0.15294	0.0014744	NaN	53.351	40	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48646	+		31285	24434	20670	20680							0.08547874391183541
LLLLNSAP	8	Unmodified	_LLLLNSAP_					0	0	0			REV__ENST00000262919.9_1_20:3627575-3627716:+|nuORF	REV__ENST00000262919.9_1_20:3627575-3627716:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	420.763104	839.511654	-0.019605	-8.2491E-06	4.3943	0.001849	4.3747	0.0018407	420.76478874687814	35.658	0.50234	35.598	35.32	35.822	-0.060337	-0.075932	0.00027394	NaN	53.351	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55077	+		31286	24434	20670	20680							0.08547874391183541
LLLLNSPV	8	Unmodified	_LLLLNSPV_					0	0	0			REV__ENSG00000127533|ENST00000248076|F2RL3	REV__ENSG00000127533|ENST00000248076|F2RL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7793884277344	2	434.778754	867.542954	-0.35442	-0.0001541	2.9005	0.0012611	2.5461	0.001107	434.7798953065686	45.578	1.4443	46.473	45.883	47.327	0.89542					104	35	4	0	0	0	0.86288	1	4336	4336		26.796	1.3459	1	4040300	+		31287	18740	20671	20681	35680	35680					0.10388447425293634
LLLLPDPSY	9	Unmodified	_LLLLPDPSY_					0	0	0			REV__ENST00000530283.1_1_11:111385694-111385793:-|nuORF	REV__ENST00000530283.1_1_11:111385694-111385793:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8287353515625	2	515.794601	1029.57465	-0.059677	-3.0781E-05	3.7314	0.0019247	3.6718	0.0018939	515.7970934425655	82.939	0.86941	83.37	83.129	83.998	0.43108					30	20	2	0	0	0	0.20789	1	9577	9577		25.45	6.0902	1	298320	+		31288	28282	20672	20682	35681	35681					0.061043953885928204
LLLLPGKE	8	Unmodified	_LLLLPGKE_					0	0	0			REV__ENSG00000236543|ENST00000430816|unknown	REV__ENSG00000236543|ENST00000430816|unknown	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78741455078125	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.81548	1	2976	2976		20.482	2.1574	1	12471000	+		31289	23792	20673	20683	35682	35682					0.11308733942337312
LLLLPLLVGG	10	Unmodified	_LLLLPLLVGG_					0	0	0		ENSG00000008516|ENST00000336577|MMP25	ENSG00000008516|ENST00000336577|MMP25	ENSG00000008516|ENST00000336577|MMP25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3446044921875	2	504.346803	1006.67905	-0.55637	-0.0002806	-2.161	-0.0010899	-2.7173	-0.0013705	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.86786	1	5877	5877		26.796	3.7536	1	1905800			31290	748	20674	20684	35683	35683					0.1759814193596867
LLLLPLLVGG	10	Unmodified	_LLLLPLLVGG_					0	0	0		ENSG00000008516|ENST00000336577|MMP25	ENSG00000008516|ENST00000336577|MMP25	ENSG00000008516|ENST00000336577|MMP25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3479309082031	2	504.346803	1006.67905	1.8375	0.00092675	1.0233	0.00051612	2.8609	0.0014429	504.347172191427	34.679	1.3601	35.06	34.73	36.09	0.3812					85	34	4	0	0	0	0.85108	1	2607	2607		19.36	0	1	1730500			31291	748	20674	20684	35684	35684					0.1759814193596867
LLLLPQGSCS	10	Unmodified	_LLLLPQGSCS_					0	0	0		ENST00000451429.6_1_1:26604249-26604363:+|nuORF	ENST00000451429.6_1_1:26604249-26604363:+|nuORF	ENST00000451429.6_1_1:26604249-26604363:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8287353515625	2	515.78371	1029.55287	-0.051525	-2.6576E-05	0.54061	0.00027884	0.48909	0.00025226	515.7840802755635	82.847	0.69693	83.278	82.962	83.659	0.43108					24	16	2	0	0	0	0.37624	1	9577	9577		40.778	22.454	1	168130			31292	11903	20675	20685	35685	35685					0.039272673683626635
LLLLPSAAPD	10	Unmodified	_LLLLPSAAPD_					0	0	0		nc|ENSG00000132031|O15232-2|MATN3;ENSG00000132031|ENST00000407540|MATN3	nc|ENSG00000132031|O15232-2|MATN3	nc|ENSG00000132031|O15232-2|MATN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	505.8033142089844	2	505.30005	1008.58555	0.55389	0.00027988	-0.52949	-0.00026755	0.024401	1.233E-05	505.80221235374654	72.566	1.421	72.696	71.821	73.242	0.13063					86	48	3	0	0	0	0.84112	1	6663	6663		37.159	6.6555	1	140530			31293	3762	20676	20686	35686	35686					0.0815979776284621
LLLLPSAAPD	10	Unmodified	_LLLLPSAAPD_					0	0	0		nc|ENSG00000132031|O15232-2|MATN3;ENSG00000132031|ENST00000407540|MATN3	nc|ENSG00000132031|O15232-2|MATN3	nc|ENSG00000132031|O15232-2|MATN3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	505.30005	1008.58555	-0.99275	-0.00050164	-1.1721	-0.00059225	-2.1648	-0.0010939	505.29861126337863	72.423	1.3836	72.466	71.827	73.211	0.042114	-0.19462	-0.00037972	NaN	37.159	82	60	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95914			31294	3762	20676	20686							0.0815979776284621
LLLLPSAAPD	10	Unmodified	_LLLLPSAAPD_					0	0	0		nc|ENSG00000132031|O15232-2|MATN3;ENSG00000132031|ENST00000407540|MATN3	nc|ENSG00000132031|O15232-2|MATN3	nc|ENSG00000132031|O15232-2|MATN3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	505.30005	1008.58555	-1.0569	-0.00053404	0.21187	0.00010706	-0.845	-0.00042698	505.8029603046434	72.739	1.6066	72.819	71.783	73.39	0.080032	0.15859	0.0010189	NaN	37.159	96	55	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	169980			31295	3762	20676	20686							0.0815979776284621
LLLLPVGAS	9	Unmodified	_LLLLPVGAS_					0	0	0			REV__ENST00000480553.1_1_21:47959692-47966956:+|nuORF	REV__ENST00000480553.1_1_21:47959692-47966956:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7882080078125	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.7932	1	3255	3255		19.36	6.4008	1	403970	+		31296	27419	20677	20687	35687	35687					0.11308733942337312
LLLLPVGAS	9	Unmodified	_LLLLPVGAS_					0	0	0			REV__ENST00000480553.1_1_21:47959692-47966956:+|nuORF	REV__ENST00000480553.1_1_21:47959692-47966956:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.787353515625	2	441.786579	881.558604	-2.6056	-0.0011511	3.8386	0.0016959	1.233	0.00054472	441.7881605091801	40.922	2.2099	41.314	40.796	43.006	0.39209					179	59	5	0	0	0	0.7932	1	3610	3610		19.36	0	1	185320000	+		31297	27419	20677	20687	35688	35688					0.11308733942337312
LLLLPVGAS	9	Unmodified	_LLLLPVGAS_					0	0	0			REV__ENST00000480553.1_1_21:47959692-47966956:+|nuORF	REV__ENST00000480553.1_1_21:47959692-47966956:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.787841796875	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.7932	1	3305	3305		19.36	4.6959	1	54520000	+		31298	27419	20677	20687	35689	35689					0.11308733942337312
LLLLPVGAS	9	Unmodified	_LLLLPVGAS_					0	0	0			REV__ENST00000480553.1_1_21:47959692-47966956:+|nuORF	REV__ENST00000480553.1_1_21:47959692-47966956:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.78826904296875	2	441.786579	881.558604	-1.1834	-0.00052282	2.9635	0.0013093	1.7801	0.00078643	441.78771241232647	40.14	0.99562	40.729	39.913	40.908	0.58915					63	23	3	0	0	0	0.7932	2	3345	3345;3387		25.45	3.7478	1	2890500	+		31299	27419	20677	20687	35690;35691	35690					0.11308733942337312
LLLLRELDA	9	Unmodified	_LLLLRELDA_					0	0	0		nc|ENSG00000160226|O43822-2|CFAP410;ENST00000462742.1_1_21:45750083-45750963:-|nuORF;nc|ENSG00000160226|O43822-3|CFAP410;ENSG00000160226|ENST00000339818|CFAP410;nc|ENSG00000160226|O43822-4|CFAP410	nc|ENSG00000160226|O43822-2|CFAP410	nc|ENSG00000160226|O43822-2|CFAP410	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7715454101562	2	528.326599	1054.63865	0.92092	0.00048655	-0.19867	-0.00010496	0.72225	0.00038159	528.3265189420446	54.823	1.297	55.23	54.864	56.161	0.40663					53	30	3	0	0	0	0.20789	1	5710	5710		23.042	0	1	594880			31300	5572	20678	20688	35692	35692					0.11351175545519254
LLLLRSPYT	9	Unmodified	_LLLLRSPYT_					0	0	0		ENST00000338488.8_1_9:102584219-102584522:+|nuORF	ENST00000338488.8_1_9:102584219-102584522:+|nuORF	ENST00000338488.8_1_9:102584219-102584522:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3261108398438	2	538.329142	1074.64373	-0.51595	-0.00027775	-2.4109	-0.0012978	-2.9268	-0.0015756	538.3278592314944	105.99	1.6493	105.99	105.37	107.02	0					100	37	3	0	0	0	0.7932	1	11074	11074		18.324	0.95945	1	642860			31301	10204	20679	20689	35693	35693					0.10939479408125408
LLLLRSPYT	9	Unmodified	_LLLLRSPYT_					0	0	0		ENST00000338488.8_1_9:102584219-102584522:+|nuORF	ENST00000338488.8_1_9:102584219-102584522:+|nuORF	ENST00000338488.8_1_9:102584219-102584522:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3256225585938	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12814	12814		24.203	1.1603	1	4041000			31302	10204	20679	20689	35694	35694					0.10939479408125408
LLLLSGTM	8	Unmodified	_LLLLSGTM_					0	0	0			REV__ENSG00000179314|ENST00000317744|WSCD1	REV__ENSG00000179314|ENST00000317744|WSCD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	424.2502746582031	2	424.251514	846.488476	-0.96203	-0.00040814	-2.5028	-0.0010618	-3.4648	-0.00147	424.25046651193156	107.31	0.79755	107.31	106.93	107.73	0					66	18	4	0	0	0	0.88915	2	11122	11122;11133		35.201	5.3592	1	4999300	+		31303	22331	20680	20690	35695;35696	35695					0.059091122822110265
LLLLSGTM	8	Unmodified	_LLLLSGTM_					0	0	0			REV__ENSG00000179314|ENST00000317744|WSCD1	REV__ENSG00000179314|ENST00000317744|WSCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.249755859375	2	424.251514	846.488476	-1.706	-0.00072376	-1.8037	-0.00076521	-3.5096	-0.001489	424.25084756935905	107.01	1.1995	107.14	106.73	107.93	0.13867					96	29	5	0	0	0	0.86288	1	11452	11452		26.796	3.7594	1	11083000	+		31304	22331	20680	20690	35697	35697					0.059091122822110265
LLLLSGTM	8	Unmodified	_LLLLSGTM_					0	0	0			REV__ENSG00000179314|ENST00000317744|WSCD1	REV__ENSG00000179314|ENST00000317744|WSCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	424.2501525878906	2	424.251514	846.488476	0.73419	0.00031148	-4.3182	-0.001832	-3.584	-0.0015205	424.2497618988356	107.12	1.1041	107.22	106.78	107.88	0.091255					91	26	5	0	0	0	0.88915	2	11520	11461;11520		42.474	5.3592	1	9522100	+		31305	22331	20680	20690	35698;35699	35699					0.059091122822110265
LLLLSGTM	8	Unmodified	_LLLLSGTM_					0	0	0			REV__ENSG00000179314|ENST00000317744|WSCD1	REV__ENSG00000179314|ENST00000317744|WSCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.2502136230469	2	424.251514	846.488476	-1.8671	-0.00079214	-1.675	-0.0007106	-3.5421	-0.0015027	424.250891156039	107.16	1.149	107.19	106.72	107.87	0.036125					99	27	5	0	0	0	0.884	1	11456	11456		33.516	3.674	1	9677200	+		31306	22331	20680	20690	35700	35700					0.059091122822110265
LLLLTLLPH	9	Unmodified	_LLLLTLLPH_					0	0	0			REV__ENST00000519685.5_1_8:22874978-22875368:+|nuORF	REV__ENST00000519685.5_1_8:22874978-22875368:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.84423828125	2	516.844428	1031.6743	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.792	1	17.792	17.292	18.292	0								0	0	0	0.33301	1	243	243		19.36	5.5846	1		+		31307	28083	20681	20691	35701	35701					0.15973257793189077
LLLLVMKVK	9	Unmodified	_LLLLVMKVK_					0	0	0			REV__ENST00000523590.5_3_1:242011560-242012219:+|nuORF	REV__ENST00000523590.5_3_1:242011560-242012219:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.3746337890625	2	528.864306	1055.71406	1.2427	0.00065722	1.923	0.001017	3.1657	0.0016742	528.865331527749	108.97	0.49326	109.01	108.78	109.27	0.034355					63	23	4	0	0	0	0.20789	1	11997	11997		12.959	9.8	1	2696000	+		31308	28141	20682	20692	35702	35702					0.18843061472239242
LLLLVMKVK	9	Unmodified	_LLLLVMKVK_					0	0	0			REV__ENST00000523590.5_3_1:242011560-242012219:+|nuORF	REV__ENST00000523590.5_3_1:242011560-242012219:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	528.864306	1055.71406	0.83083	0.0004394	2.354	0.0012449	3.1848	0.0016843	528.8654548351137	108.97	0.45123	109.05	108.84	109.29	0.078552	0.023307	0.0010724	NaN	12.959	33	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	946250	+		31309	28141	20682	20692							0.18843061472239242
LLLLVMKVK	9	Unmodified	_LLLLVMKVK_					0	0	0			REV__ENST00000523590.5_3_1:242011560-242012219:+|nuORF	REV__ENST00000523590.5_3_1:242011560-242012219:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	528.864306	1055.71406	-1.521	-0.00080441	4.8174	0.0025477	3.2964	0.0017433	528.8668040018412	109	0.41042	109.02	108.81	109.22	0.020561	-0.0075689	0.003678	NaN	12.959	33	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1144500	+		31310	28141	20682	20692							0.18843061472239242
LLLLVMKVK	9	Unmodified	_LLLLVMKVK_					0	0	0			REV__ENST00000523590.5_3_1:242011560-242012219:+|nuORF	REV__ENST00000523590.5_3_1:242011560-242012219:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	528.864306	1055.71406	5.3306	0.0028192	-1.7588	-0.00093016	3.5718	0.001889	528.8631903835587	108.98	0.45473	109.07	108.87	109.32	0.090057	0.043347	-0.0032778	NaN	12.959	33	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1109700	+		31311	28141	20682	20692							0.18843061472239242
LLLLVPLVV	9	Unmodified	_LLLLVPLVV_					0	0	0			REV__ENSG00000157227|ENST00000311852|MMP14	REV__ENSG00000157227|ENST00000311852|MMP14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.8494873046875	2	489.851722	977.68889	-0.25031	-0.00012261	-2.5156	-0.0012323	-2.7659	-0.0013549	489.85032598388403	75.262	0.55761	75.216	74.93	75.488	-0.045982					25	14	2	0	0	0	0.78292	1	7412	7412		29.842	0	1	125980	+		31312	20537	20683	20693	35703	35703					0.19915329941329674
LLLLVPLVV	9	Unmodified	_LLLLVPLVV_					0	0	0			REV__ENSG00000157227|ENST00000311852|MMP14	REV__ENSG00000157227|ENST00000311852|MMP14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.8490295410156	2	489.851722	977.68889	0.56048	0.00027455	-3.3092	-0.001621	-2.7487	-0.0013465	489.8499435094206	74.939	0.71374	75.071	74.863	75.577	0.13207					33	19	2	0	0	0	0.78292	1	6943	6943		29.842	8.1392	1	142460	+		31313	20537	20683	20693	35704	35704					0.19915329941329674
LLLLVPVPL	9	Unmodified	_LLLLVPVPL_					0	0	0		ENSG00000143590|ENST00000368408|EFNA3;nc|ENSG00000143590|P52797-2|EFNA3	ENSG00000143590|ENST00000368408|EFNA3	ENSG00000143590|ENST00000368408|EFNA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	488.8397216796875	2	488.843897	975.67324	0.57326	0.00028023	-3.6169	-0.0017681	-3.0437	-0.0014879	488.8422182148518	76.542	0.39124	76.677	76.435	76.826	0.13478					17	13	2	0	0	0	0.7932	1	7164	7164		14.664	0	1	62114			31314	4649	20684	20694	35705	35705					0.18443043424269945
LLLLVPVPL	9	Unmodified	_LLLLVPVPL_					0	0	0		ENSG00000143590|ENST00000368408|EFNA3;nc|ENSG00000143590|P52797-2|EFNA3	ENSG00000143590|ENST00000368408|EFNA3	ENSG00000143590|ENST00000368408|EFNA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.84295654296875	2	488.843897	975.67324	-0.54872	-0.00026824	-2.1201	-0.0010364	-2.6688	-0.0013046	488.8426188032876	81.534	0.56721	81.96	81.63	82.197	0.42645					30	13	3	0	0	0	0.7932	1	9389	9389		8.8223	0	1	439930			31315	4649	20684	20694	35706	35706					0.18443043424269945
LLLLVPVPL	9	Unmodified	_LLLLVPVPL_					0	0	0		ENSG00000143590|ENST00000368408|EFNA3;nc|ENSG00000143590|P52797-2|EFNA3	ENSG00000143590|ENST00000368408|EFNA3	ENSG00000143590|ENST00000368408|EFNA3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	488.843897	975.67324	-1.2486	-0.00061038	-1.3533	-0.00066157	-2.6019	-0.0012719	488.84310676970915	76.634	0.51587	76.723	76.361	76.877	0.089371	0.023043	0.00060706	NaN	14.664	22	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53511			31316	4649	20684	20694							0.18443043424269945
LLLLVPYPVLL	11	Unmodified	_LLLLVPYPVLL_					0	0	0			REV__chr13:33820468-33821132|17|11.06|0.12|6.55|+|0|TE_info:LTR16C,LTR16C_dup4365,ERVL,LTR,donor,+,33820215,33820468|None,RFC3|1	REV__chr13:33820468-33821132|17|11.06|0.12|6.55|+|0|TE_info:LTR16C,LTR16C_dup4365,ERVL,LTR,donor,+,33820215,33820468|None,RFC3|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3795166015625	2	626.917593	1251.82063	0.95422	0.00059822	2.7388	0.001717	3.693	0.0023152	626.9196155068753	105.89	0.24351	105.93	105.87	106.11	0.038322					6	5	2	0	0	0	0.1766	1	11603	11603		11.511	0	1	46228	+		31317	15566	20685	20695	35707	35707					0.20479515238412205
LLLLYDRASD	10	Unmodified	_LLLLYDRASD_					0	0	0			REV__ENST00000496156.5_1_1:46745258-46745910:-|nuORF	REV__ENST00000496156.5_1_1:46745258-46745910:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3434448242188	2	589.824421	1177.63429	-0.66618	-0.00039293	-2.1263	-0.0012541	-2.7925	-0.0016471	589.8230771983378	96.497	1.5038	96.559	95.708	97.212	0.062225					55	34	2	0	0	0	0.37624	1	10157	10157		44.377	18.314	1	67491	+		31318	27747	20686	20696	35708	35708					0.05257666331931432
LLLMELAVM	9	Unmodified	_LLLMELAVM_					0	0	0			REV__nc|ENSG00000124496|Q96PN7-3|TRERF1	REV__nc|ENSG00000124496|Q96PN7-3|TRERF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7930908203125	2	516.795232	1031.57591	-0.047501	-2.4548E-05	-3.3562	-0.0017345	-3.4037	-0.001759	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.76402	1	8917	8917		35.201	3.2459	1	692890	+		31319	18591	20687	20697	35709	35709					0.061385701614653954
LLLMKKNH	8	Unmodified	_LLLMKKNH_					0	0	0		ENST00000411618.1_1_9:30800054-30800297:-|nuORF	ENST00000411618.1_1_9:30800054-30800297:-|nuORF	ENST00000411618.1_1_9:30800054-30800297:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.80340576171875	2	498.80478	995.595007	0.36192	0.00018053	-2.5471	-0.0012705	-2.1851	-0.00109	498.8033596820182	51.857	1.6149	51.917	51.457	53.072	0.059719					144	50	4	0	0	0	0.86791	1	4233	4233		28.254	1.4582	1	2712200			31320	11328	20688	20698	35710	35710					0.09703287567390362
LLLMLLRFRLF	11	Unmodified	_LLLMLLRFRLF_					0	0	0			REV__ENST00000380693.7_1_X:11777873-11777969:+|nuORF	REV__ENST00000380693.7_1_X:11777873-11777969:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.30126953125	3	478.972104	1433.89448	-0.50222	-0.00024055	-0.97731	-0.00046811	-1.4795	-0.00070865	478.972209421922	67.377	0.18982	67.341	67.289	67.479	-0.035698					11	7	2	0	0	0	0.18238	1	6465	6465		3.026	0	1	47979	+		31321	25950	20689	20699	35711	35711					0.19489160129091943
LLLNGKLTMSA	11	Unmodified	_LLLNGKLTMSA_					0	0	0		ENSG00000186141|ENST00000334163|POLR3C	ENSG00000186141|ENST00000334163|POLR3C	ENSG00000186141|ENST00000334163|POLR3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.8397216796875	2	580.839017	1159.66348	0.64193	0.00037286	2.0135	0.0011695	2.6554	0.0015423	580.8399997377094	69.658	0.88029	69.793	69.47	70.351	0.13506					122	43	4	0	0	0	0.7434	1	6317	6317		23.523	4.4192	1	14396000			31322	7777	20690	20700	35712	35712					0.09003487356585538
LLLNGRDIG	9	Unmodified	_LLLNGRDIG_					0	0	0		ENSG00000162426|ENST00000471889|SLC45A1	ENSG00000162426|ENST00000471889|SLC45A1	ENSG00000162426|ENST00000471889|SLC45A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.2882995605469	2	485.787641	969.56073	-0.85604	-0.00041586	-2.3032	-0.0011189	-3.1592	-0.0015347	485.7862827659192	15.717	0.35344	15.765	15.634	15.987	0.047803					21	13	2	0	0	0	0.7932	1	75	75		24.203	0	1	56329			31323	5688	20691	20701	35713	35713					0.07473162680139467
LLLNHVQQGVY	11	Unmodified	_LLLNHVQQGVY_					0	0	0			REV__ENST00000524544.1_1_11:80364480-80364744:-|nuORF	REV__ENST00000524544.1_1_11:80364480-80364744:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3618774414062	2	642.358962	1282.70337	2.6975	0.0017327	2.3103	0.0014841	5.0078	0.0032168	642.3601603180224	112.87	0.9769	112.84	112.65	113.62	-0.024811					46	24	2	0	0	0	0.63176	1	12576	12576		40.778	5.6261	1	12229000	+		31324	28166	20692	20702	35714	35714					0.07332750351542927
LLLNLLRMDV	10	Unmodified	_LLLNLLRMDV_					0	0	0		ENST00000372725.5_1_10:76585359-76602521:+|nuORF	ENST00000372725.5_1_10:76585359-76602521:+|nuORF	ENST00000372725.5_1_10:76585359-76602521:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5802001953125	3	400.577531	1198.71076	3.4037	0.0013634	4.207	0.0016852	7.6107	0.0030487	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.78666	1	13603	13603		40.058	3.7405	1	5321000			31325	10716	20693	20703	35715	35715					0.11935766627561861
LLLNVVPPKIH	11	Unmodified	_LLLNVVPPKIH_					0	0	0			REV__nc|ENSG00000118200|Q08AD1-2|CAMSAP2	REV__nc|ENSG00000118200|Q08AD1-2|CAMSAP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.708740234375	2	621.900266	1241.78598	3.9139	0.0024341	-3.9341	-0.0024466	-0.020207	-1.2567E-05	621.8977438352945	103.48	0.42825	103.74	103.46	103.89	0.26524					12	9	2	0	0	0	0.17564	1	12643	12643		20.947	4.2295	1	438610	+		31326	18296	20694	20704	35716	35716					0.1747569215033309
LLLPALLSS	9	Unmodified	_LLLPALLSS_					0	0	0		nc|ENSG00000149582|Q86YD3-3|TMEM25;ENST00000529001.5_1_11:118402516-118404307:+|nuORF;nc|ENSG00000149582|Q86YD3-5|TMEM25;nc|ENSG00000149582|Q86YD3-2|TMEM25;nc|ENSG00000149582|Q86YD3-4|TMEM25;ENSG00000149582|ENST00000313236|TMEM25;ENST00000526941.1_1_11:118402516-118402606:+|nuORF;ENST00000533587.5_1_11:118402516-118403175:+|nuORF;ENST00000525298.5_1_11:118402516-118403187:+|nuORF	nc|ENSG00000149582|Q86YD3-3|TMEM25	nc|ENSG00000149582|Q86YD3-3|TMEM25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.80047607421875	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.7932	1	3111	3111		12.207	0.69583	1	1091400			31327	5039	20695	20705	35717	35717					0.11905003113804469
LLLPFALSPPP	11	Unmodified	_LLLPFALSPPP_					0	0	0		ENST00000402703.6_1_14:37131094-37132119:+|nuORF	ENST00000402703.6_1_14:37131094-37132119:+|nuORF	ENST00000402703.6_1_14:37131094-37132119:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.8521118164062	2	582.854993	1163.69543	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.92	1	112.89	112.39	113.39	-0.032333								0	0	0	0.56276	1	12050	12050		16.473	0	1				31328	11246	20696	20706	35718	35718					0.12013223102030679
LLLPGLSVG	9	Unmodified	_LLLPGLSVG_					0	0	0		ENST00000509525.5_1_5:132534789-132560973:-|nuORF	ENST00000509525.5_1_5:132534789-132560973:-|nuORF	ENST00000509525.5_1_5:132534789-132560973:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.778564453125	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.76996	1	3487	3487		33.516	0	1	15771000			31329	12992	20697	20707	35719	35719					0.10388447425293634
LLLPHMKKID	10	Unmodified	_LLLPHMKKID_					0	0	0		ENSG00000060749|ENST00000650167|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1;nc|ENSG00000060749|Q2KHR3-2|QSER1	ENSG00000060749|ENST00000650167|QSER1	ENSG00000060749|ENST00000650167|QSER1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3661499023438	2	604.365201	1206.71585	-0.16822	-0.00010167	2.2665	0.0013698	2.0983	0.0012681	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.86763	1	10807	10807		26.693	1.1189	1	47715000			31330	1069	20698	20708	35720	35720					0.12076070490184065
LLLPHMKKID	10	Unmodified	_LLLPHMKKID_					0	0	0		ENSG00000060749|ENST00000650167|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1;nc|ENSG00000060749|Q2KHR3-2|QSER1	ENSG00000060749|ENST00000650167|QSER1	ENSG00000060749|ENST00000650167|QSER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.24688720703125	3	403.245893	1206.71585	0.73411	0.00029603	1.6938	0.00068302	2.4279	0.00097905	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.86763	1	11197	11197		31.634	1.0654	1	18617000			31331	1069	20698	20708	35721	35721					0.12076070490184065
LLLPHMKKID	10	Unmodified	_LLLPHMKKID_					0	0	0		ENSG00000060749|ENST00000650167|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1;nc|ENSG00000060749|Q2KHR3-2|QSER1	ENSG00000060749|ENST00000650167|QSER1	ENSG00000060749|ENST00000650167|QSER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3671264648438	2	604.365201	1206.71585	-1.2751	-0.00077064	4.1148	0.0024869	2.8397	0.0017162	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85939	1	12170	12170		23.042	6.5693	1	3346600			31332	1069	20698	20708	35722	35722					0.12076070490184065
LLLPHWAKV	9	Unmodified	_LLLPHWAKV_					0	0	0		chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1;ENST00000459805.5_1_1:155184905-155186549:-|nuORF;nc|ENSG00000177628|P04062-3|GBA1;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;nc|ENSG00000177628|P04062-4|GBA1;nc|ENSG00000177628|P04062-5|GBA1;nc|ENSG00000177628|P04062-2|GBA1;ENSG00000177628|ENST00000368373|GBA1;ENST00000473223.5_1_1:155184463-155187072:-|nuORF	chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1;ENST00000473223.5_1_1:155184463-155187072:-|nuORF	chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8367309570312	2	538.834394	1075.65424	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.67	1	114.68	114.18	115.18	0.0094528								0	0	0	0.31088	1	13836	13836		26.796	7.4361	1				31333	24;12277	20699	20709	35723	35723					0.11943506853208419
LLLPIETT	8	Unmodified	_LLLPIETT_					0	0	0		ENST00000305632.9_1_7:72984486-72984732:-|nuORF	ENST00000305632.9_1_7:72984486-72984732:-|nuORF	ENST00000305632.9_1_7:72984486-72984732:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2743225097656	2	450.276044	898.537535	0.68452	0.00030823	-4.3919	-0.0019776	-3.7074	-0.0016694	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.86791	1	9638	9638		28.254	1.4582	1	41438000			31334	9851	20700	20710	35724	35724					0.08420723842812095
LLLPKLPTL	9	Unmodified	_LLLPKLPTL_					0	0	0		ENSG00000053900|ENST00000315368|ANAPC4;nc|ENSG00000053900|Q9UJX5-3|ANAPC4;nc|ENSG00000053900|Q9UJX5-2|ANAPC4	ENSG00000053900|ENST00000315368|ANAPC4	ENSG00000053900|ENST00000315368|ANAPC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.345458984375	2	504.346803	1006.67905	0.11336	5.7171E-05	-3.112	-0.0015695	-2.9987	-0.0015124	504.3451867946114	55.153	1.8423	55.554	54.023	55.866	0.40101					89	43	3	0	0	0	0.7932	1	5620	5620		23.042	2.0956	1	1856800			31335	1012	20701	20711	35725	35725					0.17598141935934564
LLLPKLPTL	9	Unmodified	_LLLPKLPTL_					0	0	0		ENSG00000053900|ENST00000315368|ANAPC4;nc|ENSG00000053900|Q9UJX5-3|ANAPC4;nc|ENSG00000053900|Q9UJX5-2|ANAPC4	ENSG00000053900|ENST00000315368|ANAPC4	ENSG00000053900|ENST00000315368|ANAPC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3455505371094	2	504.346803	1006.67905	-0.55637	-0.0002806	-2.161	-0.0010899	-2.7173	-0.0013705	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.76764	2	5794	5773;5794		34.173	7.3764	1	1905800			31336	1012	20701	20711	35726;35727	35727					0.17598141935934564
LLLPKLPTL	9	Unmodified	_LLLPKLPTL_					0	0	0		ENSG00000053900|ENST00000315368|ANAPC4;nc|ENSG00000053900|Q9UJX5-3|ANAPC4;nc|ENSG00000053900|Q9UJX5-2|ANAPC4	ENSG00000053900|ENST00000315368|ANAPC4	ENSG00000053900|ENST00000315368|ANAPC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3452453613281	2	504.346803	1006.67905	1.0557	0.00053246	-3.8818	-0.0019578	-2.8261	-0.0014253	504.3447732141236	56.244	2.3019	56.803	56.541	58.843	0.55954					121	55	3	0	0	0	0.78536	2	5871	5833;5871		29.15	7.1897	1	1272700			31337	1012	20701	20711	35728;35729	35729					0.17598141935934564
LLLPLFPV	8	Unmodified	_LLLPLFPV_					0	0	0			REV__nc|ENSG00000155313|Q9UHP3|USP25	REV__nc|ENSG00000155313|Q9UHP3|USP25	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3011779785156	2	456.301865	910.589176	-1.9609	-0.00089476	0.42413	0.00019353	-1.5368	-0.00070123	456.3019244318546	33.431	1.5568	33.431	33.135	34.692	0					145	44	4	0	0	0	0.84567	1	1806	1806		24.504	0	1	2313000	+		31338	20423	20702	20712	35730	35730					0.13030512327384258
LLLPLLPAP	9	Unmodified	_LLLPLLPAP_					0	0	0			REV__ENSG00000185442|ENST00000327355|FAM174B	REV__ENSG00000185442|ENST00000327355|FAM174B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.82122802734375	2	473.820421	945.62629	0.090543	4.2901E-05	2.7417	0.0012991	2.8323	0.001342	473.82167197644884	37.75	0.81836	37.692	37.116	37.934	-0.057915					45	26	2	0	0	0	0.7932	1	2146	2146		21.702	7.0382	1	89536	+		31339	22765	20703	20713	35731	35731					0.1513018387313423
LLLPLLPAP	9	Unmodified	_LLLPLLPAP_					0	0	0			REV__ENSG00000185442|ENST00000327355|FAM174B	REV__ENSG00000185442|ENST00000327355|FAM174B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	473.820421	945.62629	-1.0011	-0.00047432	3.974	0.0018829	2.9729	0.0014086	473.8221715883798	37.876	0.79911	37.892	37.271	38.07	0.016563	0.17353	4.8261E-05	NaN	21.702	36	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64670	+		31340	22765	20703	20713							0.1513018387313423
LLLPLLPAP	9	Unmodified	_LLLPLLPAP_					0	0	0			REV__ENSG00000185442|ENST00000327355|FAM174B	REV__ENSG00000185442|ENST00000327355|FAM174B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	473.820421	945.62629	0.20706	9.8111E-05	2.7077	0.001283	2.9148	0.0013811	473.8216275821487	37.455	0.83183	37.555	37.201	38.032	0.099277	-0.16399	-0.0011517	NaN	21.702	38	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70632	+		31341	22765	20703	20713							0.1513018387313423
LLLPLPSRSR	10	Unmodified	_LLLPLPSRSR_					0	0	0		ENST00000296575.7_1_4:145567307-145567847:+|nuORF	ENST00000296575.7_1_4:145567307-145567847:+|nuORF	ENST00000296575.7_1_4:145567307-145567847:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3706665039062	2	576.36659	1150.71863	0.5301	0.00030553	3.5513	0.0020468	4.0814	0.0023524	576.3685738596373	44.83	1.2947	44.843	44.185	45.48	0.012058					69	30	3	0	0	0	0.86589	1	3220	3220		29.15	3.5755	1	296100			31342	9743	20704	20714	35732	35732					0.14929661939368088
LLLPLQYQI	9	Unmodified	_LLLPLQYQI_					0	0	0			REV__ENSG00000167972|ENST00000301732|ABCA3	REV__ENSG00000167972|ENST00000301732|ABCA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.8372802734375	2	550.839342	1099.66413	0.92119	0.00050743	-4.2637	-0.0023486	-3.3425	-0.0018412	550.8367504291579	24.488	0.54977	24.445	24.112	24.662	-0.043221					31	11	3	0	0	0	0.7932	1	883	883		25.45	1.9275	1	65876	+		31343	21442	20705	20715	35733	35733					0.11828650067946
LLLPLVQS	8	Unmodified	_LLLPLVQS_					0	0	0			REV__ENST00000367296.8_2_1:201687867-201749685:+|nuORF	REV__ENST00000367296.8_2_1:201687867-201749685:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7879638671875	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.82464	1	2482	2482		21.702	0	1	11532000	+		31344	25561	20706	20716	35734	35734					0.11308733942337312
LLLPLVQS	8	Unmodified	_LLLPLVQS_					0	0	0			REV__ENST00000367296.8_2_1:201687867-201749685:+|nuORF	REV__ENST00000367296.8_2_1:201687867-201749685:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7875671386719	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.80706	1	3284	3284		19.36	0	1	448230	+		31345	25561	20706	20716	35735	35735					0.11308733942337312
LLLPPTSA	8	Unmodified	_LLLPPTSA_					0	0	0		ENST00000467576.1_1_6:31743192-31744939:-|nuORF;nc|ENSG00000204396|Q9Y334-2|VWA7;ENSG00000204396|ENST00000375688|VWA7	ENST00000467576.1_1_6:31743192-31744939:-|nuORF	ENST00000467576.1_1_6:31743192-31744939:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24835205078125	2	406.249829	810.485105	-1.1354	-0.00046124	-1.5216	-0.00061817	-2.657	-0.0010794	406.24912053143106	91.114	2.1144	91.114	90.563	92.677	0					101	49	3	0	0	0	0.86288	1	8901	8901		26.796	0	1	849560			31346	8440	20707	20717	35736	35736					0.07228185499843676
LLLPPTSA	8	Unmodified	_LLLPPTSA_					0	0	0		ENST00000467576.1_1_6:31743192-31744939:-|nuORF;nc|ENSG00000204396|Q9Y334-2|VWA7;ENSG00000204396|ENST00000375688|VWA7	ENST00000467576.1_1_6:31743192-31744939:-|nuORF	ENST00000467576.1_1_6:31743192-31744939:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2485656738281	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.86288	1	9118	9118		26.796	0	1	50007000			31347	8440	20707	20717	35737	35737					0.07228185499843676
LLLPPTSA	8	Unmodified	_LLLPPTSA_					0	0	0		ENST00000467576.1_1_6:31743192-31744939:-|nuORF;nc|ENSG00000204396|Q9Y334-2|VWA7;ENSG00000204396|ENST00000375688|VWA7	ENST00000467576.1_1_6:31743192-31744939:-|nuORF	ENST00000467576.1_1_6:31743192-31744939:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2484130859375	2	406.249829	810.485105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.449	1	15.366	14.866	15.866	-0.083363								0	0	0	0.29353	1	42	42		28.254	0	1				31348	8440	20707	20717	35738	35738					0.07228185499843676
LLLPPTTPLIM	11	Unmodified	_LLLPPTTPLIM_					0	0	0		ENST00000564578.5_1_16:75670441-75675529:-|nuORF;ENST00000302445.7_1_16:75674207-75675529:-|nuORF	ENST00000564578.5_1_16:75670441-75675529:-|nuORF	ENST00000564578.5_1_16:75670441-75675529:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8650512695312	2	604.869785	1207.72502	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.22	1	117.19	116.69	117.69	-0.02433								0	0	0	0.56276	1	12981	12981		16.473	4.9621	1				31349	9820	20708	20718	35739	35739					0.12946419055856495
LLLPPTTT	8	Unmodified	_LLLPPTTT_					0	0	0		ENST00000280605.4_1_4:164394333-164394471:-|nuORF	ENST00000280605.4_1_4:164394333-164394471:-|nuORF	ENST00000280605.4_1_4:164394333-164394471:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.26141357421875	2	428.262936	854.51132	1.2297	0.00052665	-4.2128	-0.0018042	-2.9831	-0.0012775	428.26104076888095	90.552	2.3243	91.003	90.412	92.737	0.45058					198	55	5	0	0	0	0.87276	1	10733	10733		29.842	0	1	32404000			31350	9620	20709	20719	35740	35740					0.07824454671310832
LLLPRKRK	8	Unmodified	_LLLPRKRK_					0	0	0			REV__nc|ENSG00000025156|Q03933-2|HSF2	REV__nc|ENSG00000025156|Q03933-2|HSF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.36083984375	2	512.361111	1022.70767	-0.36988	-0.00018951	0.50559	0.00025904	0.13571	6.9531E-05	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.86294	1	7166	7166		8.8223	0.59103	1	304520	+		31351	16256	20710	20720	35741	35741					0.1972230435574147
LLLPSAPN	8	Unmodified	_LLLPSAPN_					0	0	0		ENSG00000107951|ENST00000263063|MTPAP;nc|ENSG00000107951|Q9NVV4-2|MTPAP;ENST00000488290.5_1_10:30602540-30654262:-|nuORF	ENSG00000107951|ENST00000263063|MTPAP	ENSG00000107951|ENST00000263063|MTPAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7461242675781	2	412.747453	823.480354	-1.8202	-0.00075129	-0.83652	-0.00034527	-2.6567	-0.0010966	412.7469769415949	84.864	3.004	85.04	83.072	86.076	0.17561					129	69	4	0	0	0	0.91005	1	8303	8303		42.474	15.678	1	1518200			31352	2382	20711	20721	35742	35742					0.06155301357091503
LLLPSHPHL	9	Unmodified	_LLLPSHPHL_					0	0	0			REV__ENST00000535914.1_1_12:26278184-26278990:-|nuORF	REV__ENST00000535914.1_1_12:26278184-26278990:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.80810546875	2	513.808377	1025.6022	0.35777	0.00018383	0.79125	0.00040655	1.149	0.00059038	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.7932	1	3940	3940		25.45	0	1	1443600	+		31353	28397	20712	20722	35743	35743					0.09042343439477918
LLLPSLPV	8	Unmodified	_LLLPSLPV_					0	0	0			REV__ENST00000496841.5_1_2:128377805-128378036:+|nuORF	REV__ENST00000496841.5_1_2:128377805-128378036:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2950744628906	2	426.283672	850.552791	0.11292	4.8137E-05	-1.9492	-0.00083091	-1.8363	-0.00078277	426.28229834301453	71.541	0.24641	72.091	71.908	72.154	0.55008					9	5	3	0	0	0	0.4196	1	8006	8006		20.482	5.8177	1	38052	+		31354	27757	20713	20723	35744	35744					0.12153635430672693
LLLPSPKG	8	Unmodified	_LLLPSPKG_					0	0	0			REV__nc|ENSG00000115289|Q9BSM1-3|PCGF1	REV__nc|ENSG00000115289|Q9BSM1-3|PCGF1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.76715087890625	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.032	1	44.032	43.532	44.532	0								0	0	0	0.29498	1	3164	3164		26.796	0	1		+		31355	18105	20714	20724	35745	35745					0.09792178253815109
LLLPSPKG	8	Unmodified	_LLLPSPKG_					0	0	0			REV__nc|ENSG00000115289|Q9BSM1-3|PCGF1	REV__nc|ENSG00000115289|Q9BSM1-3|PCGF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2679443359375	2	412.765646	823.516739	-0.024773	-1.0226E-05	2.7576	0.0011383	2.7329	0.001128	412.7671753724154	37.892	4.8812	37.868	35.596	40.477	-0.023979					267	113	4	0	0	0	0.86288	1	2591	2591		26.796	5.0938	1	1546000	+		31356	18105	20714	20724	35746	35746					0.09792178253815109
LLLPSPKG	8	Unmodified	_LLLPSPKG_					0	0	0			REV__nc|ENSG00000115289|Q9BSM1-3|PCGF1	REV__nc|ENSG00000115289|Q9BSM1-3|PCGF1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7667541503906	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.974	1	37.073	36.573	37.573	0.099277								0	0	0	0.29498	1	2084	2084		26.796	3.7594	1		+		31357	18105	20714	20724	35747	35747					0.09792178253815109
LLLPSTLLG	9	Unmodified	_LLLPSTLLG_					0	0	0			REV__ENST00000291041.5_1_16:67962699-67962768:+|nuORF	REV__ENST00000291041.5_1_16:67962699-67962768:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7991027832031	2	463.799686	925.584819	-2.5644	-0.0011894	3.5074	0.0016267	0.94293	0.00043733	463.80118382898894	40.741	0.9326	41.133	40.832	41.765	0.39209					70	26	3	0	0	0	0.76996	1	3549	3549		33.516	1.5607	1	5806600	+		31358	24665	20715	20725	35748	35748					0.11905003113815837
LLLPSTLLG	9	Unmodified	_LLLPSTLLG_					0	0	0			REV__ENST00000291041.5_1_16:67962699-67962768:+|nuORF	REV__ENST00000291041.5_1_16:67962699-67962768:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.79949951171875	2	463.799686	925.584819	-1.7032	-0.00078997	2.9558	0.0013709	1.2525	0.00058091	463.8008996094523	40.729	0.89679	41.318	40.908	41.805	0.58916					67	25	3	0	0	0	0.7932	1	3544	3544		18.324	1.8513	1	5530000	+		31359	24665	20715	20725	35749	35749					0.11905003113815837
LLLPTESPL	9	Unmodified	_LLLPTESPL_					0	0	0		ENST00000485448.1_1_19:40872390-40872810:+|nuORF	ENST00000485448.1_1_19:40872390-40872810:+|nuORF	ENST00000485448.1_1_19:40872390-40872810:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79638671875	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.934	1	62.957	62.457	63.457	0.022984								0	0	0	0.31472	1	5496	5496		25.45	1.2474	1				31360	12555	20716	20726	35750	35750					0.08312395388554705
LLLPTPPGLAQ	11	Unmodified	_LLLPTPPGLAQ_					0	0	0			REV__ENST00000561123.2_1_15:77864640-77900952:+|nuORF	REV__ENST00000561123.2_1_15:77864640-77900952:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3405151367188	2	560.342249	1118.66995	-0.40673	-0.00022791	-3.2012	-0.0017938	-3.608	-0.0020217	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.73893	1	10757	10757		24.519	2.5593	1	60162000	+		31361	28778	20717	20727	35751	35751					0.11535748579581195
LLLPTPSA	8	Unmodified	_LLLPTPSA_					0	0	0			REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24847412109375	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.86791	2	9021	9021;9082		28.254	0	1	50007000	+		31362	28908	20718	20728	35752;35753	35752					0.07228185499843676
LLLPTPSA	8	Unmodified	_LLLPTPSA_					0	0	0			REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2485046386719	2	406.249829	810.485105	1.1516	0.00046786	-4.2235	-0.0017158	-3.0718	-0.0012479	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.86288	3	9298	9178;9262;9298		28.254	0	1	58759000	+		31363	28908	20718	20728	35754;35755;35756	35756					0.07228185499843676
LLLPTPSA	8	Unmodified	_LLLPTPSA_					0	0	0			REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.24847412109375	2	406.249829	810.485105	-1.8141	-0.00073698	-1.2967	-0.0005268	-3.1108	-0.0012638	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.86791	3	8788	8728;8752;8788		37.028	0	1	42617000	+		31364	28908	20718	20728	35757;35758;35759	35759					0.07228185499843676
LLLPTPSA	8	Unmodified	_LLLPTPSA_					0	0	0			REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24847412109375	2	406.249829	810.485105	0.62319	0.00025317	-3.6411	-0.0014792	-3.0179	-0.001226	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.82464	1	8749	8749		21.702	0	1	38001000	+		31365	28908	20718	20728	35760	35760					0.07228185499843676
LLLPTPSA	8	Unmodified	_LLLPTPSA_					0	0	0			REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2476806640625	2	406.249829	810.485105	0.64458	0.00026186	-3.2845	-0.0013343	-2.6399	-0.0010725	406.248379767224	90.786	2.0194	90.94	90.429	92.448	0.15388					81	48	3	0	0	0	0.80706	1	9047	9047		19.36	0	1	878080	+		31366	28908	20718	20728	35761	35761					0.07228185499843676
LLLPTPSA	8	Unmodified	_LLLPTPSA_					0	0	0			REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	REV__ENST00000569143.1_1_16:777475-778030:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2484436035156	2	406.249829	810.485105	-1.9277	-0.00078311	-1.0996	-0.00044672	-3.0273	-0.0012298	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.81548	1	8769	8769		20.482	0	1	31099000	+		31367	28908	20718	20728	35762	35762					0.07228185499843676
LLLPVLSQ	8	Unmodified	_LLLPVLSQ_					0	0	0			REV__ENSG00000204839|ENST00000398882|MROH6	REV__ENSG00000204839|ENST00000398882|MROH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7868347167969	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.82419	2	2908	2863;2908		21.702	0	1	14534000	+		31368	23521	20719	20729	35763;35764	35764					0.11308733942325944
LLLQIDNAR	9	Unmodified	_LLLQIDNAR_					0	0	0		chr17:40866867-40866976|22|28.59|0.0|16.55|-|ENST00000647902|KRT12,KRT12;ENSG00000187242|ENST00000251643|KRT12;CON__Q99456	chr17:40866867-40866976|22|28.59|0.0|16.55|-|ENST00000647902|KRT12,KRT12	chr17:40866867-40866976|22|28.59|0.0|16.55|-|ENST00000647902|KRT12,KRT12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.3131713867188	2	528.314023	1054.61349	1.2423	0.00065632	-1.2033	-0.0006357	0.039025	2.0617E-05	528.3135537689813	98.237	1.3537	98.285	97.706	99.06	0.048164					68	30	3	0	0	0	0.74721	1	10496	10496		37.159	0	1	423330		+	31369	227	20720	20730	35765	35765					0.08837120742941806
LLLQLAAP	8	Unmodified	_LLLQLAAP_					0	0	0			REV__ENSG00000142583|ENST00000377424|SLC2A5	REV__ENSG00000142583|ENST00000377424|SLC2A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2770080566406	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.86791	1	3093	3093		28.254	1.4582	1	10440000	+		31370	19743	20721	20731	35766	35766					0.10712464770847419
LLLQLWTVQVP	11	Unmodified	_LLLQLWTVQVP_					0	0	0			REV__ENST00000554944.5_1_9:34646701-34647660:+|nuORF	REV__ENST00000554944.5_1_9:34646701-34647660:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677917480469	3	437.267463	1308.78056	-0.040503	-1.7711E-05	0.93992	0.000411	0.89941	0.00039328	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.74771	1	4230	4230		22.562	1.5294	1	2735300	+		31371	28674	20722	20732	35767	35767					0.13851968567837503
LLLQLWTVQVP	11	Unmodified	_LLLQLWTVQVP_					0	0	0			REV__ENST00000554944.5_1_9:34646701-34647660:+|nuORF	REV__ENST00000554944.5_1_9:34646701-34647660:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2679138183594	3	437.267463	1308.78056	-0.7643	-0.0003342	1.6505	0.00072173	0.88624	0.00038752	437.2680989446087	50.458	1.6052	50.435	49.633	51.238	-0.02343					188	43	5	0	0	0	0.67041	2	4303	4303;4314		36.318	11.192	1	2919200	+		31372	28674	20722	20732	35768;35769	35768					0.13851968567837503
LLLQPKLHMA	10	Unmodified	_LLLQPKLHMA_					0	0	0		ENST00000489944.1_1_1:151106967-151107344:-|nuORF	ENST00000489944.1_1_1:151106967-151107344:-|nuORF	ENST00000489944.1_1_1:151106967-151107344:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3543090820312	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.8	1	118.77	118.27	119.27	-0.024208								0	0	0	0.45132	1	13164	13164		17.365	0.89182	1				31373	12658	20723	20733	35770	35770					0.11479801318728278
LLLQPKLHMA	10	Unmodified	_LLLQPKLHMA_					0	0	0		ENST00000489944.1_1_1:151106967-151107344:-|nuORF	ENST00000489944.1_1_1:151106967-151107344:-|nuORF	ENST00000489944.1_1_1:151106967-151107344:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3536376953125	2	582.352094	1162.68964	2.7406	0.001596	0.14445	8.4122E-05	2.885	0.0016801	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.84112	1	12718	12718		37.159	1.5408	1	7862700			31374	12658	20723	20733	35771	35771					0.11479801318728278
LLLQPLRLKR	10	Unmodified	_LLLQPLRLKR_					0	0	0		ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2892150878906	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.064	1	72.104	71.604	72.604	0.040222								0	0	0	0.45132	1	6925	6925		11.636	0	1				31375	13893	20724	20734	35772	35772					0.22494489652808625
LLLQPLRLKR	10	Unmodified	_LLLQPLRLKR_					0	0	0		ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2882385253906	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.171	1	72.212	71.712	72.712	0.040222								0	0	0	0.45132	1	6936	6936		11.636	1.532	1				31376	13893	20724	20734	35773	35773					0.22494489652808625
LLLQPLRLKR	10	Unmodified	_LLLQPLRLKR_					0	0	0		ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.29058837890625	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.228	1	72.268	71.768	72.768	0.040222								0	0	0	0.45132	1	6942	6942		11.097	0	1				31377	13893	20724	20734	35774	35774					0.22494489652808625
LLLQPLRLKR	10	Unmodified	_LLLQPLRLKR_					0	0	0		ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.29046630859375	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.43	1	72.473	71.973	72.973	0.042114								0	0	0	0.45132	1	6968	6968		7.3997	1.0788	1				31378	13893	20724	20734	35775	35775					0.22494489652808625
LLLQPLRLKR	10	Unmodified	_LLLQPLRLKR_					0	0	0		ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2897644042969	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.774	1	72.816	72.316	73.316	0.042114								0	0	0	0.45132	1	7013	7013		21.686	8.7283	1				31379	13893	20724	20734	35776	35776					0.22494489652808625
LLLQPLRLKR	10	Unmodified	_LLLQPLRLKR_					0	0	0		ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2887268066406	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.846	1	72.888	72.388	73.388	0.042114								0	0	0	0.45132	1	7021	7021		11.097	0.99287	1				31380	13893	20724	20734	35777	35777					0.22494489652808625
LLLQPLRLKR	10	Unmodified	_LLLQPLRLKR_					0	0	0		ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	ENST00000564793.1_1_16:75327852-75396798:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.28729248046875	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.279	1	73.323	72.823	73.823	0.043648								0	0	0	0.45132	1	7077	7077		11.097	0	1				31381	13893	20724	20734	35778	35778					0.22494489652808625
LLLQRHEF	8	Unmodified	_LLLQRHEF_					0	0	0		nc|ENSG00000078269|O15056-3|SYNJ2;chr6:158093104-158093888|18|12.06|0.72|4.06|+|ENST00000640338|SYNJ2,SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.3025512695312	2	528.303458	1054.59236	0.43434	0.00022946	-1.7521	-0.00092566	-1.3178	-0.0006962	528.3023261653867	58.048	0.81956	58.602	58.228	59.047	0.55323					35	19	2	0	0	0	0.92973	1	6097	6097		50.025	0	1	1113300			31382	471	20725	20735	35779	35779					0.06725155434082808
LLLRDLSVF	9	Unmodified	_LLLRDLSVF_					0	0	0			REV__ENSG00000179008|ENST00000321731|C14orf39	REV__ENSG00000179008|ENST00000321731|C14orf39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3281860351562	2	538.329142	1074.64373	0.070633	3.8024E-05	-4.4231	-0.0023811	-4.3525	-0.0023431	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.78536	1	10475	10475		29.15	4.6304	1	109840000	+		31383	22308	20726	20736	35780	35780					0.10939479408125408
LLLRIQNPWGR	11	Unmodified	_LLLRIQNPWGR_					0	0	0		ENSG00000142330|ENST00000391984|CAPN10;nc|ENSG00000142330|Q9HC96-3|CAPN10;ENST00000494738.5_1_2:241531329-241535404:+|nuORF;nc|ENSG00000142330|Q9HC96-5|CAPN10;nc|ENSG00000142330|Q9HC96-4|CAPN10;nc|ENSG00000142330|Q9HC96-2|CAPN10	ENSG00000142330|ENST00000391984|CAPN10	ENSG00000142330|ENST00000391984|CAPN10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.9406433105469	3	455.941973	1364.80409	-0.018225	-8.3094E-06	-2.0697	-0.00094365	-2.0879	-0.00095196	455.940966623884	20.554	1.3955	19.925	19.49	20.885	-0.6296					70	33	4	0	0	0	0.79224	1	715	715		12.957	1.0251	1	132260			31384	4559	20727	20737	35781	35781					0.1362782712499211
LLLRLGKG	8	Unmodified	_LLLRLGKG_					0	0	0			REV__CON__Q3T052	REV__CON__Q3T052	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.30023193359375	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.86294	1	7667	7667		8.8223	0	1	5485100	+	+	31385	16016	20728	20738	35782	35782					0.14627262273370434
LLLRLPRPLM	10	Unmodified	_LLLRLPRPLM_					0	0	0			REV__ENSG00000237441|ENST00000497454|RGL2	REV__ENSG00000237441|ENST00000497454|RGL2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	407.9306640625	3	407.933649	1220.77912	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.86	1	117.86	117.36	118.36	0								0	0	0	0.45132	1	12023	12023		7.3997	0	1		+		31386	23797	20729	20739	35783	35783					0.1775605599807477
LLLRLRKWR	9	Unmodified	_LLLRLRKWR_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.947265625	3	418.61542	1252.82443	0.012694	5.3141E-06	0.50481	0.00021132	0.5175	0.00021663	418.6161336829297	15.372	0.14442	15.43	15.35	15.494	0.057872					7	5	2	0	0	0	0.20789	1	24	24		12.812	0	1	22770	+		31387	21394	20730	20740	35784	35784					0.20813042575491636
LLLRLSAGLLR	11	Unmodified	_LLLRLSAGLLR_					0	0	0		ENST00000574710.1_1_17:4841038-4842521:-|nuORF	ENST00000574710.1_1_17:4841038-4842521:-|nuORF	ENST00000574710.1_1_17:4841038-4842521:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.8792724609375	2	612.911165	1223.80778	-0.38756	-0.00023754	-0.48916	-0.00029981	-0.87672	-0.00053735	612.9108749852961	104.98	0.33495	104.96	104.9	105.24	-0.014809					9	7	2	0	0	0	0.17472	1	11349	11349		18.262	0	1	72787			31388	14036	20731	20741	35785	35785					0.2048249689887598
LLLRLSARHE	10	Unmodified	_LLLRLSARHE_					0	0	0			REV__nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD	REV__nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3666381835938	2	604.367121	1206.71969	0.90473	0.00054679	-2.0534	-0.001241	-1.1487	-0.00069423	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.86348	1	11352	11352		31.53	0	1	105740000	+		31389	23628	20732	20742	35786	35786					0.12459876308275852
LLLRLSVC	8	Unmodified	_LLLRLSVC_					0	0	0		ENST00000256682.8_1_12:49331189-49331324:-|nuORF	ENST00000256682.8_1_12:49331189-49331324:-|nuORF	ENST00000256682.8_1_12:49331189-49331324:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	458.7877197265625	2	458.786056	915.557558	0.80291	0.00036836	2.0876	0.00095776	2.8905	0.0013261	458.7870101504016	92.972	4.4564	93.018	92.411	96.867	0.045448					249	105	5	0	0	0	0.86791	1	9697	9697		28.254	4.0515	1	17992000			31390	9343	20733	20743	35787	35787					0.09640196301768356
LLLRNKFPVFW	11	Unmodified	_LLLRNKFPVFW_					0	0	0			REV__ENST00000487422.1_1_X:154753956-154754112:-|nuORF	REV__ENST00000487422.1_1_X:154753956-154754112:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.2887878417969	3	478.286969	1431.83908	0.25122	0.00012016	4.2682	0.0020414	4.5194	0.0021616	478.2889922009053	34.005	0.69975	34.31	34.035	34.735	0.30494					50	16	4	0	0	0	0.73621	1	2512	2512		25.126	0.89417	1	886130	+		31391	27575	20734	20744	35788	35788					0.14043069932972685
LLLRPLLLLVS	11	Unmodified	_LLLRPLLLLVS_					0	0	0			REV__ENST00000299084.8_1_15:38545205-38545376:+|nuORF	REV__ENST00000299084.8_1_15:38545205-38545376:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.28973388671875	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.497	1	72.457	71.957	72.957	-0.04039								0	0	0	0.56276	1	7083	7083		14.086	0.57807	1		+		31392	24738	20735	20745	35789	35789					0.2388572236127402
LLLRPLLLLVS	11	Unmodified	_LLLRPLLLLVS_					0	0	0			REV__ENST00000299084.8_1_15:38545205-38545376:+|nuORF	REV__ENST00000299084.8_1_15:38545205-38545376:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.28924560546875	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.581	1	72.54	72.04	73.04	-0.04039								0	0	0	0.56276	1	7094	7094		14.694	10.611	1		+		31393	24738	20735	20745	35790	35790					0.2388572236127402
LLLRQRHRRRR	11	Unmodified	_LLLRQRHRRRR_					0	0	0			REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF	REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	520.6497192382812	3	520.669581	1558.98691	-0.042902	-2.2338E-05	1.887	0.00098249	1.8441	0.00096015	520.6707342465621	107.91	0.10657	107.87	107.78	107.89	-0.042404					4	2	2	0	0	0	0.18372	1	11753	11753		3.4087	0	1	720460	+		31394	26278	20736	20746	35791	35791					0.22977819030165847
LLLRRADS	8	Unmodified	_LLLRRADS_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.28790283203125	2	472.287808	942.561064	-0.97076	-0.00045848	0.82719	0.00039067	-0.14357	-6.7805E-05	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.86288	2	9683	9683;9695		26.796	1.222	1	26024000	+		31395	21140	20737	20747	35792;35793	35792					0.0874858239999412
LLLRRADS	8	Unmodified	_LLLRRADS_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.28759765625	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.86791	1	11582	11582		28.254	0	1	24731000	+		31396	21140	20737	20747	35794	35794					0.0874858239999412
LLLRRDSA	8	Unmodified	_LLLRRDSA_					0	0	0			REV__ENSG00000179943|ENST00000221665|FIZ1	REV__ENSG00000179943|ENST00000221665|FIZ1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28814697265625	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.90465	1	12208	12208		40.573	4.9543	1	3080300	+		31397	22369	20738	20748	35795	35795					0.0874858239999412
LLLRRKKP	8	Unmodified	_LLLRRKKP_					0	0	0		nc|ENSG00000105290|P51693|APLP1;ENSG00000105290|ENST00000221891|APLP1	nc|ENSG00000105290|P51693|APLP1	nc|ENSG00000105290|P51693|APLP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.360595703125	2	512.361111	1022.70767	-0.36988	-0.00018951	0.50559	0.00025904	0.13571	6.9531E-05	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.82419	1	7177	7177		13.775	0.81615	1	304520			31398	2201	20739	20749	35796	35796					0.1972230435574147
LLLRSLSFN	9	Unmodified	_LLLRSLSFN_					0	0	0		ENST00000471771.5_1_13:28019229-28024035:-|nuORF	ENST00000471771.5_1_13:28019229-28024035:-|nuORF	ENST00000471771.5_1_13:28019229-28024035:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.818941	1061.62333	-0.033207	-1.766E-05	-3.353	-0.0017832	-3.3862	-0.0018009	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.78058	1	8783	8783		30.504	0	1	1254600			31399	12248	20740	20750	35797	35797					0.09498308748334239
LLLRSLSFN	9	Unmodified	_LLLRSLSFN_					0	0	0		ENST00000471771.5_1_13:28019229-28024035:-|nuORF	ENST00000471771.5_1_13:28019229-28024035:-|nuORF	ENST00000471771.5_1_13:28019229-28024035:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8165283203125	2	531.818941	1061.62333	0.49482	0.00026316	-4.4068	-0.0023436	-3.912	-0.0020805	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.78983	1	10193	10193		27.882	0	1	1227700			31400	12248	20740	20750	35798	35798					0.09498308748334239
LLLRTTAS	8	Unmodified	_LLLRTTAS_					0	0	0		ENST00000338272.8_1_1:109633363-109633495:+|nuORF	ENST00000338272.8_1_1:109633363-109633495:+|nuORF	ENST00000338272.8_1_1:109633363-109633495:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77130126953125	2	437.77146	873.528367	-0.63876	-0.00027963	0.070293	3.0772E-05	-0.56847	-0.00024886	437.77162175664915	38.677	1.0193	39.199	38.87	39.89	0.52235					96	23	6	0	0	0	0.83058	1	3290	3290		12.959	0	1	19739000			31401	10200	20741	20751	35799	35799					0.0865437527713766
LLLSATVLP	9	Unmodified	_LLLSATVLP_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8000793457031	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.78536	1	3477	3477		29.15	0	1	279560			31402	6721	20742	20752	35800	35800					0.11905003113804469
LLLSATVLP	9	Unmodified	_LLLSATVLP_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.7978210449219	2	463.799686	925.584819	0.23374	0.00010841	1.7317	0.00080317	1.9655	0.00091158	463.8003055874184	41.421	1.4891	41.495	41.009	42.498	0.073418					84	40	3	0	0	0	0.77546	1	2711	2711		31.955	1.4512	1	378670			31403	6721	20742	20752	35801	35801					0.11905003113804469
LLLSGFSA	8	Unmodified	_LLLSGFSA_					0	0	0		ENST00000332629.6_1_3:196281619-196287933:-|nuORF	ENST00000332629.6_1_3:196281619-196287933:-|nuORF	ENST00000332629.6_1_3:196281619-196287933:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2324523925781	2	404.234179	806.453805	-1.2631	-0.0005106	-2.2404	-0.00090563	-3.5035	-0.0014162	404.2330856183434	82.529	2.4032	82.529	81.258	83.662	0					126	65	3	0	0	0	0.81548	1	7676	7676		20.482	1.1219	1	248830			31404	10131	20743	20753	35802	35802					0.04283612465758324
LLLSIPLTG	9	Unmodified	_LLLSIPLTG_					0	0	0			REV__ENST00000480110.5_1_6:26445933-26448699:+|nuORF	REV__ENST00000480110.5_1_6:26445933-26448699:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.80010986328125	2	463.799686	925.584819	0.22161	0.00010278	1.3447	0.00062365	1.5663	0.00072643	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.7932	1	3285	3285		17.365	0	1	1570500	+		31405	17896	20744	20754	35803	35803					0.11905003113815837
LLLSKAAVP	9	Unmodified	_LLLSKAAVP_					0	0	0		nc|ENSG00000258436|Q7Z5J4-2|RAI1;ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1;nc|ENSG00000258436|Q7Z5J4-4|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3010559082031	2	456.299853	910.585153	0.2873	0.0001311	2.3096	0.0010538	2.5969	0.0011849	456.30080462463604	48.151	1.3839	48.189	47.742	49.126	0.037735					72	38	3	0	0	0	0.7932	1	3736	3736		25.45	0	1	274320			31406	2417	20745	20755	35804	35804					0.1262842283365444
LLLSKKQVK	9	Unmodified	_LLLSKKQVK_					0	0	0			REV__ENST00000594525.5_1_19:48248816-48255954:+|nuORF	REV__ENST00000594525.5_1_19:48248816-48255954:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.8683471679688	2	528.860609	1055.70667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.02	1	114.08	113.58	114.58	0.063232								0	0	0	0.35623	1	12206	12206		12.959	0	1		+		31407	17530	20746	20756	35805	35805					0.1810404519619624
LLLSLASPV	9	Unmodified	_LLLSLASPV_					0	0	0			REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7923583984375	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.77546	1	2910	2910		31.955	0	1	759950	+		31408	19174	20747	20757	35806	35806					0.10984716596760791
LLLSLASPV	9	Unmodified	_LLLSLASPV_					0	0	0			REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7926025390625	2	456.791861	911.569169	0.050318	2.2985E-05	2.6739	0.0012214	2.7242	0.0012444	456.7929831409672	38.348	1.1506	38.32	37.435	38.586	-0.027843					79	26	4	0	0	0	0.77546	2	2611	2575;2611		31.955	0	1	1618700	+		31409	19174	20747	20757	35807;35808	35808					0.10984716596760791
LLLSLASPV	9	Unmodified	_LLLSLASPV_					0	0	0			REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7926330566406	2	456.791861	911.569169	-1.1724	-0.00053555	3.9802	0.0018181	2.8078	0.0012826	456.7935742947897	38.88	1.6337	38.833	37.942	39.576	-0.047001					120	37	4	0	0	0	0.76996	1	2657	2657		33.516	0	1	2323700	+		31410	19174	20747	20757	35809	35809					0.10984716596760791
LLLSLASPV	9	Unmodified	_LLLSLASPV_					0	0	0			REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7928161621094	2	456.791861	911.569169	-1.2516	-0.0005717	4.1535	0.0018973	2.9019	0.0013256	456.7936304493402	37.846	1.122	37.863	37.475	38.597	0.016563					101	34	4	0	0	0	0.76996	1	2254	2254		33.516	0	1	1324300	+		31411	19174	20747	20757	35810	35810					0.10984716596760791
LLLSLASPV	9	Unmodified	_LLLSLASPV_					0	0	0			REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7923278808594	2	456.791861	911.569169	-0.0055701	-2.5444E-06	2.9863	0.0013641	2.9807	0.0013616	456.7931079883192	38.776	1.3461	38.723	38.257	39.603	-0.052731					134	39	4	0	0	0	0.7932	1	2270	2270		25.45	0	1	1653300	+		31412	19174	20747	20757	35811	35811					0.10984716596760791
LLLSLASPV	9	Unmodified	_LLLSLASPV_					0	0	0			REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79296875	2	456.791861	911.569169	-0.5708	-0.00026074	3.3989	0.0015526	2.8281	0.0012919	456.79332762585267	37.831	1.4155	38.144	37.663	39.079	0.31312					135	35	5	0	0	0	0.7932	1	3001	3001		26.796	0	1	9282000	+		31413	19174	20747	20757	35812	35812					0.10984716596760791
LLLSLASPV	9	Unmodified	_LLLSLASPV_					0	0	0			REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	REV__ENST00000376440.6_1_13:99890691-99992665:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7930908203125	2	456.791861	911.569169	0.90302	0.00041249	1.9801	0.00090447	2.8831	0.001317	456.792654311578	37.107	0.83018	37.593	36.916	37.747	0.48581					79	19	5	0	0	0	0.7932	1	2972	2972		26.796	0	1	4180400	+		31414	19174	20747	20757	35813	35813					0.10984716596760791
LLLSLDSDL	9	Unmodified	_LLLSLDSDL_					0	0	0			REV__ENSG00000253649|ENST00000647727|PRSS51	REV__ENSG00000253649|ENST00000647727|PRSS51	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.78033447265625	2	494.78169	987.548827	-1.5759	-0.00077971	-0.99733	-0.00049346	-2.5732	-0.0012732	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.69914	1	8412	8412		40.573	1.7665	1	569520	+		31415	23881	20748	20758	35814	35814					0.054555011462980474
LLLSLLSLYV	10	Unmodified	_LLLSLLSLYV_					0	0	0			REV__nc|ENSG00000100170|P13866-2|SLC5A1	REV__nc|ENSG00000100170|P13866-2|SLC5A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3628540039062	2	567.36265	1132.71075	-0.8743	-0.00049604	2.4089	0.0013667	1.5346	0.00087069	567.3638800486743	44.538	2.1986	44.515	43.895	46.093	-0.023079					155	51	5	0	0	0	0.85694	1	3420	3420		21.96	4.5949	1	2273000	+		31416	17148	20749	20759	35815	35815					0.14970089899247796
LLLSLPLKL	9	Unmodified	_LLLSLPLKL_					0	0	0			REV__ENST00000358990.3_1_8:101542041-101571978:-|nuORF	REV__ENST00000358990.3_1_8:101542041-101571978:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.3533630371094	2	505.354628	1008.6947	0.83979	0.00042439	-3.2353	-0.001635	-2.3955	-0.0012106	505.3529105876311	52.187	0.98739	52.854	52.596	53.584	0.6673					38	23	3	0	0	0	0.62081	1	5248	5248		45.952	0	1	715370	+		31417	25448	20750	20760	35816	35816					0.19070428452994292
LLLSLPLKL	9	Unmodified	_LLLSLPLKL_					0	0	0			REV__ENST00000358990.3_1_8:101542041-101571978:-|nuORF	REV__ENST00000358990.3_1_8:101542041-101571978:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	505.354628	1008.6947	-0.50599	-0.00025571	-2.1638	-0.0010935	-2.6698	-0.0013492	505.3532434495111	53.247	0.13332	53.295	53.224	53.358	0.047802	0.26067	0.00060039	NaN	45.952	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33075	+		31418	25448	20750	20760							0.19070428452994292
LLLSLPYINAA	11	Unmodified	_LLLSLPYINAA_					0	0	0			REV__nc|ENSG00000198689|Q92581-3|SLC9A6	REV__nc|ENSG00000198689|Q92581-3|SLC9A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	594.3524169921875	2	594.355357	1186.69616	-0.60252	-0.00035811	-1.9449	-0.001156	-2.5475	-0.0015141	594.3549137001515	102.9	0.68748	102.91	102.55	103.23	0.0082016					33	16	3	0	0	0	0.75495	1	11056	11056		20.947	0.95016	1	241130	+		31419	23355	20751	20761	35817	35817					0.11028017751118568
LLLSLRPQICL	11	Unmodified	_LLLSLRPQICL_					0	0	0		ENST00000561123.2_1_15:77864640-77900952:+|nuORF	ENST00000561123.2_1_15:77864640-77900952:+|nuORF	ENST00000561123.2_1_15:77864640-77900952:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8933715820312	2	634.891583	1267.76861	-1.1756	-0.00074638	2.438	0.0015479	1.2624	0.00080148	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.64498	1	11297	11297		39.253	2.8061	1	66671000			31420	13828	20752	20762	35818	35818					0.14544028553018506
LLLSPLSLG	9	Unmodified	_LLLSPLSLG_					0	0	0			REV__nc|ENSG00000162976|Q8N755-2|SLC66A3	REV__nc|ENSG00000162976|Q8N755-2|SLC66A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79302978515625	2	456.791861	911.569169	-0.0055701	-2.5444E-06	2.9863	0.0013641	2.9807	0.0013616	456.7931079883192	38.776	1.3461	38.723	38.257	39.603	-0.052731					134	39	4	0	0	0	0.7932	1	2360	2360		25.45	0	1	1653300	+		31421	20868	20753	20763	35819	35819					0.1098471659677216
LLLSPLTSP	9	Unmodified	_LLLSPLTSP_					0	0	0			REV__ENST00000576617.5_1_17:6978375-6978720:-|nuORF	REV__ENST00000576617.5_1_17:6978375-6978720:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7890625	2	470.789318	939.564084	-1.2872	-0.000606	2.6482	0.0012468	1.361	0.00064077	470.7904662555656	44.259	1.28	44.256	43.778	45.058	-0.002449					48	30	2	0	0	0	0.64922	1	3446	3446		44.117	5.3107	1	126510	+		31422	28996	20754	20764	35820	35820					0.09188412734147278
LLLSQELE	8	Unmodified	_LLLSQELE_					0	0	0			REV__ENSG00000106665|ENST00000223398|CLIP2	REV__ENSG00000106665|ENST00000223398|CLIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7670593261719	2	472.768583	943.522613	-0.10807	-5.1094E-05	-2.6699	-0.0012622	-2.778	-0.0013133	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.86288	1	8406	8406		26.796	0	1	501240	+		31423	17622	20755	20765	35821	35821					0.048592319748081536
LLLSQIPK	8	Unmodified	_LLLSQIPK_					0	0	0			REV__ENSG00000174145|ENST00000309447|NWD2	REV__ENSG00000174145|ENST00000309447|NWD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.77923583984375	2	456.299853	910.585153	-1.5329	-0.00069945	1.3665	0.00062353	-0.16637	-7.5916E-05	456.30032454595704	43.375	1.0487	43.808	43.336	44.385	0.4334					60	25	3	0	0	0	0.4196	1	3869	3869		3.41	2.4131	1	1156700	+		31424	21975	20756	20766	35822	35822					0.1262842283366581
LLLSSLPTL	9	Unmodified	_LLLSSLPTL_					0	0	0			REV__ENSG00000171812|ENST00000397799|COL8A2	REV__ENSG00000171812|ENST00000397799|COL8A2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.80584716796875	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.429	1	39.377	38.877	39.877	-0.052731								0	0	0	0.31472	1	2415	2415		25.45	6.0902	1		+		31425	21771	20757	20767	35823	35823					0.11580985768239316
LLLTAPSP	8	Unmodified	_LLLTAPSP_					0	0	0		ENST00000368069.7_1_1:160259783-160259930:-|nuORF	ENST00000368069.7_1_1:160259783-160259930:-|nuORF	ENST00000368069.7_1_1:160259783-160259930:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24859619140625	2	406.249829	810.485105	-1.171	-0.0004757	-1.7314	-0.00070337	-2.9023	-0.0011791	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.88915	1	8508	8508		35.201	1.6851	1	30016000			31426	10580	20758	20768	35824	35824					0.07228185499855044
LLLTAPSP	8	Unmodified	_LLLTAPSP_					0	0	0		ENST00000368069.7_1_1:160259783-160259930:-|nuORF	ENST00000368069.7_1_1:160259783-160259930:-|nuORF	ENST00000368069.7_1_1:160259783-160259930:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.24859619140625	2	406.249829	810.485105	-1.235	-0.0005017	-1.7781	-0.00072233	-3.013	-0.001224	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.88915	1	10432	10432		35.201	1.6851	1	38125000			31427	10580	20758	20768	35825	35825					0.07228185499855044
LLLTASSC	8	Unmodified	_LLLTASSC_					0	0	0		ENST00000233121.6_1_2:27249316-27249727:+|nuORF	ENST00000233121.6_1_2:27249316-27249727:+|nuORF	ENST00000233121.6_1_2:27249316-27249727:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9104309082031	2	404.217672	806.42079	1.3086	0.00052894	0.69482	0.00028086	2.0034	0.0008098	404.22036412444675	69.28	0.67145	69.665	69.1	69.771	0.38416					23	15	3	0	0	0	0.4196	1	7574	7574		26.796	0	1	50360			31428	9222	20759	20769	35826	35826					0.00983662351404746
LLLTATRSGRW	11	Unmodified	_LLLTATRSGRW_					0	0	0		ENST00000367064.7_1_1:207494902-207495055:+|nuORF	ENST00000367064.7_1_1:207494902-207495055:+|nuORF	ENST00000367064.7_1_1:207494902-207495055:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	637.369140625	2	637.372404	1272.73025	0.0096069	6.1232E-06	-3.0041	-0.0019147	-2.9945	-0.0019086	637.3704089191367	105.98	2.6955	105.98	104.5	107.2	0					156	62	4	0	0	0	0.75544	1	10954	10954		20.837	1.7336	1	1384300			31429	10530	20760	20770	35827	35827					0.10479858962685284
LLLTEELL	8	Unmodified	_LLLTEELL_					0	0	0			REV__ENST00000507834.3_1_4:86167470-86167848:+|nuORF	REV__ENST00000507834.3_1_4:86167470-86167848:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2883605957031	2	472.289151	942.563749	-0.91682	-0.000433	-2.2553	-0.0010651	-3.1721	-0.0014981	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.87276	1	10190	10190		29.842	3.0454	1	50946000	+		31430	27914	20761	20771	35828	35828					0.0901699301429062
LLLTEELL	8	Unmodified	_LLLTEELL_					0	0	0			REV__ENST00000507834.3_1_4:86167470-86167848:+|nuORF	REV__ENST00000507834.3_1_4:86167470-86167848:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.288330078125	2	472.289151	942.563749	-0.91025	-0.0004299	-1.3576	-0.00064119	-2.2679	-0.0010711	472.2885293382865	99.077	1.813	99.3	98.699	100.51	0.22263					102	42	3	0	0	0	0.82464	1	10297	10297		21.702	1.2205	1	580890	+		31431	27914	20761	20771	35829	35829					0.0901699301429062
LLLTEELL	8	Unmodified	_LLLTEELL_					0	0	0			REV__ENST00000507834.3_1_4:86167470-86167848:+|nuORF	REV__ENST00000507834.3_1_4:86167470-86167848:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2874755859375	2	472.289151	942.563749	-1.7052	-0.00080536	-1.3875	-0.00065528	-3.0927	-0.0014606	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.86791	1	9716	9716		28.254	0.37203	1	40161000	+		31432	27914	20761	20771	35830	35830					0.0901699301429062
LLLTEPIID	9	Unmodified	_LLLTEPIID_					0	0	0			REV__nc|ENSG00000145604|Q13309-2|SKP2	REV__nc|ENSG00000145604|Q13309-2|SKP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8092041015625	2	513.807708	1025.60086	0.36714	0.00018864	2.3101	0.001187	2.6773	0.0013756	513.8088609518841	50.93	1.0953	50.98	50.541	51.637	0.049896					79	32	3	0	0	0	0.77546	1	4024	4024		31.955	2.8053	1	394250	+		31433	29912	20762	20772	35831	35831					0.08908664560067336
LLLTIISYLD	10	Unmodified	_LLLTIISYLD_					0	0	0		nc|ENSG00000153832|Q8NEA4-3|FBXO36;ENSG00000153832|ENST00000283946|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3545532226562	2	582.34974	1162.68493	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.59	1	112.57	112.07	113.07	-0.025414								0	0	0	0.45132	1	12445	12445		30.504	9.5567	1				31434	5246	20763	20773	35832	35832					0.11009195656947668
LLLTIISYLD	10	Unmodified	_LLLTIISYLD_					0	0	0		nc|ENSG00000153832|Q8NEA4-3|FBXO36;ENSG00000153832|ENST00000283946|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3567504882812	2	582.34974	1162.68493	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.47	1	113.44	112.94	113.94	-0.024811								0	0	0	0.45132	1	12555	12555		16.473	0	1				31435	5246	20763	20773	35833	35833					0.11009195656947668
LLLTKRWYT	9	Unmodified	_LLLTKRWYT_					0	0	0			REV__ENST00000336139.8_1_11:123597023-123597197:-|nuORF	REV__ENST00000336139.8_1_11:123597023-123597197:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3589477539062	2	597.355691	1192.69683	3.0849	0.0018428	1.4245	0.00085092	4.5094	0.0026937	597.3562180293547	100.36	3.052	100.31	99.202	102.25	-0.052116					175	71	4	0	0	0	0.7932	1	10949	10949		20.947	1.8434	1	3981300	+		31436	25179	20764	20774	35834	35834					0.10818857190793096
LLLTKRWYT	9	Unmodified	_LLLTKRWYT_					0	0	0			REV__ENST00000336139.8_1_11:123597023-123597197:-|nuORF	REV__ENST00000336139.8_1_11:123597023-123597197:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.3587036132812	2	597.355691	1192.69683	0.94283	0.0005632	3.1266	0.0018677	4.0694	0.0024309	597.3571269689473	100.1	2.8225	100.31	99.04	101.86	0.21512					167	67	4	0	0	0	0.7932	1	10443	10443		25.574	4.6271	1	2588300	+		31437	25179	20764	20774	35835	35835					0.10818857190793096
LLLTLAGHWLA	11	Unmodified	_LLLTLAGHWLA_					0	0	0		nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11;ENSG00000104133|ENST00000261866|SPG11	nc|ENSG00000104133|Q96JI7-2|SPG11	nc|ENSG00000104133|Q96JI7-2|SPG11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.2467956542969	3	403.24477	1206.71248	3.1806	0.0012826	2.1516	0.00086761	5.3322	0.0021502	403.2455898338112	104.57	4.2773	104.61	103.55	107.83	0.039864					310	101	5	0	0	0	0.75906	1	11347	11347		20.03	0.7678	1	15278000			31438	2116	20765	20775	35836	35836					0.11739143707859512
LLLTLFRIS	9	Unmodified	_LLLTLFRIS_					0	0	0		ENST00000199448.8_2_7:37990187-37990421:+|nuORF	ENST00000199448.8_2_7:37990187-37990421:+|nuORF	ENST00000199448.8_2_7:37990187-37990421:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3265991210938	2	538.347335	1074.68012	0.068026	3.6621E-05	3.718	0.0020016	3.786	0.0020382	538.3492466833709	101.23	0.31558	101.43	101.24	101.55	0.2058					11	7	2	0	0	0	0.20789	1	10615	10615		21.96	6.3181	1	187780			31439	9093	20766	20776	35837	35837					0.14576356304860383
LLLTLLEE	8	Unmodified	_LLLTLLEE_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2876892089844	2	472.289151	942.563749	-1.7052	-0.00080536	-1.3875	-0.00065528	-3.0927	-0.0014606	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.88915	1	9827	9827		35.201	6.9464	1	40161000	+		31440	19832	20767	20777	35838	35838					0.0901699301429062
LLLTLLLLN	9	Unmodified	_LLLTLLLLN_					0	0	0			REV__ENST00000273668.6_1_3:121554229-121563371:+|nuORF	REV__ENST00000273668.6_1_3:121554229-121563371:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.336181640625	2	513.352086	1024.68962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.904	1	65.29	64.79	65.79	0.38615								0	0	0	0.31472	1	7029	7029		25.45	1.2474	1		+		31441	24558	20768	20778	35839	35839					0.1782612459039683
LLLTLLTPIV	10	Unmodified	_LLLTLLTPIV_					0	0	0		nc|ENSG859|P60507|ERVFC1	nc|ENSG859|P60507|ERVFC1	nc|ENSG859|P60507|ERVFC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.876220703125	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.85958	1	2614	2614		15.642	7.9515	1	314410			31442	15366	20769	20779	35840	35840					0.18790680278880245
LLLTNAAL	8	Unmodified	_LLLTNAAL_					0	0	0			REV__nc|ENSG00000173662|Q7RTX1-2|TAS1R1	REV__nc|ENSG00000173662|Q7RTX1-2|TAS1R1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.76171875	2	414.763104	827.511654	1.2689	0.00052628	-4.3284	-0.0017953	-3.0596	-0.001269	414.7612423593211	88.129	2.1347	88.578	88.017	90.152	0.44893					145	51	4	0	0	0	0.93529	1	10358	10358		52.299	0	1	6571000	+		31443	21941	20770	20780	35841	35841					0.09099874391188223
LLLTPGPD	8	Unmodified	_LLLTPGPD_					0	0	0		ENST00000341418.9_1_15:68114320-68117168:+|nuORF	ENST00000341418.9_1_15:68114320-68117168:+|nuORF	ENST00000341418.9_1_15:68114320-68117168:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.23712158203125	2	413.239461	824.46437	-0.18778	-7.7597E-05	-2.7175	-0.001123	-2.9053	-0.0012006	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.81548	1	7323	7323		20.482	0	1	1747900			31444	10247	20771	20781	35842	35842					0.045115951201864846
LLLTPKRLASL	11	Unmodified	_LLLTPKRLASL_					0	0	0		ENSG00000180537|ENST00000488300|RNF182	ENSG00000180537|ENST00000488300|RNF182	ENSG00000180537|ENST00000488300|RNF182	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.8795776367188	2	612.905548	1223.79654	3.0917	0.0018949	0.14317	8.7747E-05	3.2348	0.0019827	612.9052796583559	105.25	0.47429	105.21	104.93	105.41	-0.04039					18	10	2	0	0	0	0.1731	1	11600	11600		21.686	4.2177	1	102780			31445	7334	20772	20782	35843	35843					0.1935967480474119
LLLTPPWPRA	10	Unmodified	_LLLTPPWPRA_					0	0	0			REV__ENST00000519860.3_2_5:172324967-172325219:+|nuORF	REV__ENST00000519860.3_2_5:172324967-172325219:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3536987304688	2	582.350409	1162.68626	3.1803	0.0018521	1.9439	0.001132	5.1242	0.0029841	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.80179	9	11500	11295;11378;11426;11438;11475;11500;11548;11596;11711		39.253	5.1146	1	77008000	+		31446	28089	20773	20783	35844;35845;35846;35847;35848;35849;35850;35851;35852	35849					0.1114287453635825
LLLTPPWPRA	10	Unmodified	_LLLTPPWPRA_					0	0	0			REV__ENST00000519860.3_2_5:172324967-172325219:+|nuORF	REV__ENST00000519860.3_2_5:172324967-172325219:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3543090820312	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.54	1	118.51	118.01	119.01	-0.024208								0	0	0	0.45132	1	13131	13131		29.15	9.7896	1		+		31447	28089	20773	20783	35853	35853					0.1114287453635825
LLLTPPWPRA	10	Unmodified	_LLLTPPWPRA_					0	0	0			REV__ENST00000519860.3_2_5:172324967-172325219:+|nuORF	REV__ENST00000519860.3_2_5:172324967-172325219:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3530883789062	2	582.350409	1162.68626	0.88326	0.00051437	4.387	0.0025548	5.2703	0.0030692	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.74274	11	11172	10882;10918;10942;10966;11026;11064;11136;11148;11172;11196;11258		42.396	5.9224	1	125340000	+		31448	28089	20773	20783	35854;35855;35856;35857;35858;35859;35860;35861;35862;35863;35864	35862					0.1114287453635825
LLLTPPWPRA	10	Unmodified	_LLLTPPWPRA_					0	0	0			REV__ENST00000519860.3_2_5:172324967-172325219:+|nuORF	REV__ENST00000519860.3_2_5:172324967-172325219:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3524780273438	2	582.350409	1162.68626	2.7406	0.001596	3.0386	0.0017695	5.7792	0.0033655	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.80179	6	12742	12580;12616;12640;12742;12754;12764		39.253	15.622	1	7862700	+		31449	28089	20773	20783	35865;35866;35867;35868;35869;35870	35868					0.1114287453635825
LLLTPQGIRRE	11	Unmodified	_LLLTPQGIRRE_					0	0	0			REV__ENSG00000106992|ENST00000644144|AK1	REV__ENSG00000106992|ENST00000644144|AK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.59771728515625	3	432.597983	1294.77212	-0.16962	-7.3379E-05	-0.60975	-0.00026378	-0.77937	-0.00033715	432.5976970384716	106.55	1.2774	106.52	105.86	107.13	-0.025146					98	24	5	0	0	0	0.732	2	11590	11554;11590		23.514	0	1	15884000	+		31450	17641	20774	20784	35871;35872	35872					0.13652414651232903
LLLTPQGIRRE	11	Unmodified	_LLLTPQGIRRE_					0	0	0			REV__ENSG00000106992|ENST00000644144|AK1	REV__ENSG00000106992|ENST00000644144|AK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3929443359375	2	648.393336	1294.77212	-0.0023386	-1.5163E-06	-0.71325	-0.00046246	-0.71559	-0.00046398	648.3927201405174	107.38	1.0747	107.34	106.86	107.93	-0.034409					97	25	4	0	0	0	0.66929	1	11685	11685		36.447	5.8779	1	36844000	+		31451	17641	20774	20784	35873	35873					0.13652414651232903
LLLTPQGIRRE	11	Unmodified	_LLLTPQGIRRE_					0	0	0			REV__ENSG00000106992|ENST00000644144|AK1	REV__ENSG00000106992|ENST00000644144|AK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5976257324219	3	432.597983	1294.77212	2.4047	0.0010403	-3.2118	-0.0013894	-0.80705	-0.00034913	432.5965673542701	106.31	1.2824	106.34	105.87	107.15	0.03688					86	29	5	0	0	0	0.77061	1	11616	11616		15.921	0	1	16046000	+		31452	17641	20774	20784	35874	35874					0.13652414651232903
LLLTPQGIRRE	11	Unmodified	_LLLTPQGIRRE_					0	0	0			REV__ENSG00000106992|ENST00000644144|AK1	REV__ENSG00000106992|ENST00000644144|AK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5975646972656	3	432.597983	1294.77212	2.4108	0.0010429	-2.4605	-0.0010644	-0.04966	-2.1483E-05	432.5968710757986	107.1	1.2973	107.13	106.67	107.97	0.035622					60	30	2	0	0	0	0.74763	1	11699	11699		20.315	0	1	18390000	+		31453	17641	20774	20784	35875	35875					0.13652414651232903
LLLTPQGIRRE	11	Unmodified	_LLLTPQGIRRE_					0	0	0			REV__ENSG00000106992|ENST00000644144|AK1	REV__ENSG00000106992|ENST00000644144|AK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59771728515625	3	432.597983	1294.77212	0.73482	0.00031788	-1.4599	-0.00063157	-0.72512	-0.00031369	432.59735068529625	106.11	1.1677	106.21	105.57	106.74	0.099007					121	28	6	0	0	0	0.74763	1	11374	11374		15.337	0	1	31122000	+		31454	17641	20774	20784	35876	35876					0.13652414651232903
LLLTPQGIRRE	11	Unmodified	_LLLTPQGIRRE_					0	0	0			REV__ENSG00000106992|ENST00000644144|AK1	REV__ENSG00000106992|ENST00000644144|AK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5976867675781	3	432.597983	1294.77212	-1.8326	-0.00079276	0.99264	0.00042942	-0.83992	-0.00036335	432.5983701682112	106.14	0.94881	106.2	105.74	106.69	0.053749					97	22	5	0	0	0	0.77421	1	11300	11300		15.337	1.0942	1	20584000	+		31455	17641	20774	20784	35877	35877					0.13652414651232903
LLLTPQGIRRE	11	Unmodified	_LLLTPQGIRRE_					0	0	0			REV__ENSG00000106992|ENST00000644144|AK1	REV__ENSG00000106992|ENST00000644144|AK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.392578125	2	648.393336	1294.77212	-1.1413	-0.00074001	0.67421	0.00043715	-0.46709	-0.00030286	648.3936534392657	107.12	0.99413	107.16	106.63	107.62	0.036118					92	23	4	0	0	0	0.70737	1	11378	11378		30.318	0	1	53885000	+		31456	17641	20774	20784	35878	35878					0.13652414651232903
LLLTPWHLVF	10	Unmodified	_LLLTPWHLVF_					0	0	0		ENSG00000139549|ENST00000649637|DHH	ENSG00000139549|ENST00000649637|DHH	ENSG00000139549|ENST00000649637|DHH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8693237304688	2	619.868434	1237.72232	1.7162	0.0010638	0.14874	9.2199E-05	1.8649	0.001156	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.86305	1	11542	11542		31.955	7.4357	1	4719500			31457	4378	20775	20785	35879	35879					0.11296331713197105
LLLTQATPR	9	Unmodified	_LLLTQATPR_					0	0	0		ENST00000607453.1_1_1:245133290-245134376:-|nuORF	ENST00000607453.1_1_1:245133290-245134376:-|nuORF	ENST00000607453.1_1_1:245133290-245134376:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8099365234375	2	506.811116	1011.60768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.762	1	64.886	64.386	65.386	0.12397								0	0	0	0.30778	1	5732	5732		27.882	2.4321	1				31458	14463	20776	20786	35880	35880					0.1023402223128187
LLLTSTVLP	9	Unmodified	_LLLTSTVLP_					0	0	0		nc|ENSG00000120907|P35348-5|ADRA1A;nc|ENSG00000120907|P35348-7|ADRA1A;nc|ENSG00000120907|P35348-6|ADRA1A;nc|ENSG00000120907|P35348-8|ADRA1A;nc|ENSG00000120907|P35348-9|ADRA1A;nc|ENSG00000120907|P35348-3|ADRA1A;nc|ENSG00000120907|P35348-4|ADRA1A;ENSG00000120907|ENST00000380573|ADRA1A;nc|ENSG00000120907|P35348-2|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8055114746094	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.72402	3	2803	2734;2745;2803		38.806	1.647	1	371600			31459	3158	20777	20787	35881;35882;35883	35883					0.11580985768216578
LLLTSTVLP	9	Unmodified	_LLLTSTVLP_					0	0	0		nc|ENSG00000120907|P35348-5|ADRA1A;nc|ENSG00000120907|P35348-7|ADRA1A;nc|ENSG00000120907|P35348-6|ADRA1A;nc|ENSG00000120907|P35348-8|ADRA1A;nc|ENSG00000120907|P35348-9|ADRA1A;nc|ENSG00000120907|P35348-3|ADRA1A;nc|ENSG00000120907|P35348-4|ADRA1A;ENSG00000120907|ENST00000380573|ADRA1A;nc|ENSG00000120907|P35348-2|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.804443359375	2	478.804968	955.595384	-1.2024	-0.0005757	4.0232	0.0019263	2.8208	0.0013506	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.76996	1	2676	2676		33.516	0	1	361300			31460	3158	20777	20787	35884	35884					0.11580985768216578
LLLTSTVLP	9	Unmodified	_LLLTSTVLP_					0	0	0		nc|ENSG00000120907|P35348-5|ADRA1A;nc|ENSG00000120907|P35348-7|ADRA1A;nc|ENSG00000120907|P35348-6|ADRA1A;nc|ENSG00000120907|P35348-8|ADRA1A;nc|ENSG00000120907|P35348-9|ADRA1A;nc|ENSG00000120907|P35348-3|ADRA1A;nc|ENSG00000120907|P35348-4|ADRA1A;ENSG00000120907|ENST00000380573|ADRA1A;nc|ENSG00000120907|P35348-2|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8053894042969	2	478.804968	955.595384	-1.2382	-0.00059286	1.4969	0.00071673	0.2587	0.00012387	478.80558529591235	40.624	1.0284	40.581	39.923	40.951	-0.042892					45	26	2	0	0	0	0.77546	1	2921	2921		31.955	1.4512	1	267990			31461	3158	20777	20787	35885	35885					0.11580985768216578
LLLTSTVLP	9	Unmodified	_LLLTSTVLP_					0	0	0		nc|ENSG00000120907|P35348-5|ADRA1A;nc|ENSG00000120907|P35348-7|ADRA1A;nc|ENSG00000120907|P35348-6|ADRA1A;nc|ENSG00000120907|P35348-8|ADRA1A;nc|ENSG00000120907|P35348-9|ADRA1A;nc|ENSG00000120907|P35348-3|ADRA1A;nc|ENSG00000120907|P35348-4|ADRA1A;ENSG00000120907|ENST00000380573|ADRA1A;nc|ENSG00000120907|P35348-2|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.80523681640625	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.318	1	42.28	41.78	42.78	-0.038223								0	0	0	0.31828	1	3244	3244		24.203	1.1603	1				31462	3158	20777	20787	35886	35886					0.11580985768216578
LLLTSTVLP	9	Unmodified	_LLLTSTVLP_					0	0	0		nc|ENSG00000120907|P35348-5|ADRA1A;nc|ENSG00000120907|P35348-7|ADRA1A;nc|ENSG00000120907|P35348-6|ADRA1A;nc|ENSG00000120907|P35348-8|ADRA1A;nc|ENSG00000120907|P35348-9|ADRA1A;nc|ENSG00000120907|P35348-3|ADRA1A;nc|ENSG00000120907|P35348-4|ADRA1A;ENSG00000120907|ENST00000380573|ADRA1A;nc|ENSG00000120907|P35348-2|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8055725097656	2	478.804968	955.595384	-2.1118	-0.0010111	4.0445	0.0019365	1.9327	0.00092538	478.8067215450766	42.623	1.2578	42.623	42.157	43.414	0.00016785					54	29	3	0	0	0	0.7932	1	3228	3228		24.203	1.1603	1	179530			31463	3158	20777	20787	35887	35887					0.11580985768216578
LLLTSTVLP	9	Unmodified	_LLLTSTVLP_					0	0	0		nc|ENSG00000120907|P35348-5|ADRA1A;nc|ENSG00000120907|P35348-7|ADRA1A;nc|ENSG00000120907|P35348-6|ADRA1A;nc|ENSG00000120907|P35348-8|ADRA1A;nc|ENSG00000120907|P35348-9|ADRA1A;nc|ENSG00000120907|P35348-3|ADRA1A;nc|ENSG00000120907|P35348-4|ADRA1A;ENSG00000120907|ENST00000380573|ADRA1A;nc|ENSG00000120907|P35348-2|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	nc|ENSG00000120907|P35348-5|ADRA1A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8049621582031	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.403	1	42.357	41.857	42.857	-0.045467								0	0	0	0.30053	1	2844	2844		30.504	0	1				31464	3158	20777	20787	35888	35888					0.11580985768216578
LLLTVTTVD	9	Unmodified	_LLLTVTTVD_					0	0	0			REV__ENSG00000183963|ENST00000333137|SMTN	REV__ENSG00000183963|ENST00000333137|SMTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7908630371094	2	487.792058	973.569563	-0.085472	-4.1693E-05	-2.8417	-0.0013862	-2.9272	-0.0014279	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.74721	1	8579	8579		37.159	0	1	1889700	+		31465	22639	20778	20788	35889	35889					0.0817209152594387
LLLTVTTVD	9	Unmodified	_LLLTVTTVD_					0	0	0			REV__ENSG00000183963|ENST00000333137|SMTN	REV__ENSG00000183963|ENST00000333137|SMTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7904968261719	2	487.792058	973.569563	0.64551	0.00031488	-3.596	-0.0017541	-2.9505	-0.0014392	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.78058	1	8460	8460		30.504	2.2494	1	1929300	+		31466	22639	20778	20788	35890	35890					0.0817209152594387
LLLVDIKD	8	Unmodified	_LLLVDIKD_					0	0	0		ENSG00000105131|ENST00000221730|EPHX3	ENSG00000105131|ENST00000221730|EPHX3	ENSG00000105131|ENST00000221730|EPHX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7922668457031	2	464.789318	927.564084	-1.1101	-0.00051598	3.984	0.0018517	2.8738	0.0013357	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.84341	1	2057	2057		24.203	1.166	1	415400			31467	2187	20779	20789	35891	35891					0.09740412734129222
LLLVEVQV	8	Unmodified	_LLLVEVQV_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7904052734375	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.612	1	49.638	49.138	50.138	0.025574								0	0	0	0.29755	1	3849	3849		24.203	0	1		+		31468	18987	20780	20790	35892	35892					0.10984716596760791
LLLVHPGPASL	11	Unmodified	_LLLVHPGPASL_					0	0	0			REV__ENSG00000196329|ENST00000358647|GIMAP5	REV__ENSG00000196329|ENST00000358647|GIMAP5	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	559.3187866210938	2	558.842416	1115.67028	-0.44615	-0.00024933	-3.6315	-0.0020295	-4.0777	-0.0022788	558.8405183079143	100.55	0.94954	100.55	100.04	100.99	0					44	21	4	0	0	0	0.1725	1	10249	10249		20.947	0	1	95647	+		31469	23116	20781	20791	35893	35893					0.1170716829947196
LLLVLHILSL	10	Unmodified	_LLLVLHILSL_					0	0	0			REV__ENSG00000243896|ENST00000641841|OR2A7	REV__ENSG00000243896|ENST00000641841|OR2A7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3299560546875	2	567.38646	1132.75837	0.48251	0.00027377	3.5134	0.0019935	3.9959	0.0022672	567.3887995966384	92.246	0.42309	92.467	92.065	92.488	0.22157					11	9	2	0	0	0	0.37624	1	9316	9316		0.90815	0	1	60067	+		31470	22407	20782	20792	35894	35894					0.19729788890094824
LLLVLPFF	8	Unmodified	_LLLVLPFF_					0	0	0			REV__nc|ENSG00000167608|Q7Z404-1|TMC4	REV__nc|ENSG00000167608|Q7Z404-1|TMC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.9552307128906	2	481.30969	960.604826	1.0956	0.00052732	1.6173	0.00077844	2.7129	0.0013058	481.3104585546317	19.27	1.5397	18.8	18.365	19.904	-0.46967					46	33	2	0	0	0	0.4196	1	445	445		24.504	0	1	93346	+		31471	21403	20783	20793	35895	35895					0.1229479884441389
LLLVLPFF	8	Unmodified	_LLLVLPFF_					0	0	0			REV__nc|ENSG00000167608|Q7Z404-1|TMC4	REV__nc|ENSG00000167608|Q7Z404-1|TMC4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	481.30969	960.604826	0.063136	3.0388E-05	3.7329	0.0017967	3.7961	0.0018271	481.31150454912	18.427	0.26955	18.493	18.351	18.621	0.066298	-0.19738	0.0010963	NaN	24.504	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56631	+		31472	21403	20783	20793							0.1229479884441389
LLLVLVSS	8	Unmodified	_LLLVLVSS_					0	0	0		ENSG00000164690|ENST00000297261|SHH	ENSG00000164690|ENST00000297261|SHH	ENSG00000164690|ENST00000297261|SHH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.54998779296875	2	422.281129	842.547705	0.45987	0.0001942	-3.034	-0.0012812	-2.5741	-0.001087	422.2798646807131	22.645	0.33788	22.034	21.782	22.12	-0.6107					11	7	2	0	0	0	0.4196	1	951	951		8.2313	0	1	29042			31473	5990	20784	20794	35896	35896					0.12013331568050489
LLLVMAAVGG	10	Unmodified	_LLLVMAAVGG_					0	0	0		nc|ENSG00000147852|P98155-2|VLDLR;ENSG00000147852|ENST00000382100|VLDLR	nc|ENSG00000147852|P98155-2|VLDLR	nc|ENSG00000147852|P98155-2|VLDLR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2870178222656	2	472.285889	942.557224	-0.026744	-1.2631E-05	3.8174	0.0018029	3.7907	0.0017903	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.85108	1	10296	10296		19.36	1.995	1	48574000			31474	4924	20785	20795	35897	35897					0.08364776581925071
LLLVPIEGE	9	Unmodified	_LLLVPIEGE_					0	0	0			REV__ENSG00000125872|ENST00000378858|LRRN4	REV__ENSG00000125872|ENST00000378858|LRRN4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7977600097656	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.262	1	59.255	58.755	59.755	-0.0074387								0	0	0	0.34348	1	5079	5079		16.473	0	1		+		31475	18677	20786	20796	35898	35898					0.08312395388566074
LLLVRQYRVEV	11	Unmodified	_LLLVRQYRVEV_					0	0	0		nc|ENSG00000095002|P43246-2|MSH2;ENSG00000095002|ENST00000233146|MSH2	nc|ENSG00000095002|P43246-2|MSH2	nc|ENSG00000095002|P43246-2|MSH2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.617919921875	3	463.285516	1386.83472	-1.2984	-0.00060154	-0.39022	-0.00018078	-1.6886	-0.00078232	463.6198357994845	76.686	0.41641	76.686	76.497	76.914	0					22	16	2	0	0	0	0.76892	1	6993	6993		17.833	0.36513	1	44832			31476	1716	20787	20797	35899	35899					0.156775607193822
LLLVSELGL	9	Unmodified	_LLLVSELGL_					0	0	0		ENSG00000143224|ENST00000367999|PPOX	ENSG00000143224|ENST00000367999|PPOX	ENSG00000143224|ENST00000367999|PPOX	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8049621582031	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.295	1	41.254	40.754	41.754	-0.04081								0	0	0	0.31828	1	3095	3095		24.203	1.1603	1				31477	4613	20788	20798	35900	35900					0.11580985768239316
LLLVTLHFRLP	11	Unmodified	_LLLVTLHFRLP_					0	0	0		ENST00000466883.5_1_7:65439694-65439883:-|nuORF	ENST00000466883.5_1_7:65439694-65439883:-|nuORF	ENST00000466883.5_1_7:65439694-65439883:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.2825012207031	3	441.283336	1320.82818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.955	1	40.962	40.462	41.462	0.0065727								0	0	0	0.56276	1	2983	2983		20.03	7.8238	1				31478	12141	20789	20799	35901	35901					0.18059667558713954
LLLVVKASYGT	11	Unmodified	_LLLVVKASYGT_					0	0	0		ENSG00000119457|ENST00000374228|SLC46A2	ENSG00000119457|ENST00000374228|SLC46A2	ENSG00000119457|ENST00000374228|SLC46A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3541870117188	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.6921	1	12287	12287		32.812	8.6097	1	3937500			31479	3070	20790	20800	35902	35902					0.12132017751082458
LLLVVQGP	8	Unmodified	_LLLVVQGP_					0	0	0			REV__ENSG00000064547|ENST00000407877|LPAR2	REV__ENSG00000064547|ENST00000407877|LPAR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77496337890625	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.86791	1	3328	3328		28.254	2.8041	1	11423000	+		31480	16478	20791	20801	35903	35903					0.10712464770858787
LLLVVSWVG	9	Unmodified	_LLLVVSWVG_					0	0	0		nc|ENSG00000254769|Q8NGN8|OR4A4P	nc|ENSG00000254769|Q8NGN8|OR4A4P	nc|ENSG00000254769|Q8NGN8|OR4A4P	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.301025390625	2	493.307678	984.600803	1.0004	0.0004935	-0.86416	-0.0004263	0.13624	6.7209E-05	493.30725879117597	96.639	0.58002	97.044	96.759	97.339	0.40498					20	13	2	0	0	0	0.20789	1	11596	11596		42.474	23.114	1	145040			31481	15292	20792	20802	35904	35904					0.10788709350720183
LLLWALAPL	9	Unmodified	_LLLWALAPL_					0	0	0			REV__ENSG00000224940|ENST00000446477|PRRT4	REV__ENSG00000224940|ENST00000446477|PRRT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.3233947753906	2	505.325871	1008.63719	-0.455	-0.00022992	-3.6367	-0.0018377	-4.0918	-0.0020677	505.32388066483486	80.737	0.95578	80.874	80.482	81.437	0.13702					61	22	4	0	0	0	0.72098	1	7705	7705		39.021	0	1	769050	+		31482	23735	20793	20803	35905	35905					0.1332158624740032
LLLWALAPL	9	Unmodified	_LLLWALAPL_					0	0	0			REV__ENSG00000224940|ENST00000446477|PRRT4	REV__ENSG00000224940|ENST00000446477|PRRT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.323486328125	2	505.325871	1008.63719	-1.3434	-0.00067885	-2.741	-0.0013851	-4.0844	-0.002064	505.3243696058118	80.768	1.0184	80.873	80.498	81.517	0.10526					64	25	4	0	0	0	0.55559	2	7687	7676;7687		49.211	1.5535	1	628090	+		31483	23735	20793	20803	35906;35907	35907					0.1332158624740032
LLLWALAPL	9	Unmodified	_LLLWALAPL_					0	0	0			REV__ENSG00000224940|ENST00000446477|PRRT4	REV__ENSG00000224940|ENST00000446477|PRRT4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	505.325871	1008.63719	0.62759	0.00031714	-4.7727	-0.0024118	-4.1451	-0.0020946	505.3232988221178	80.75	1.1448	80.893	80.485	81.63	0.14352	0.013266	-0.0010842	NaN	49.211	67	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	642300	+		31484	23735	20793	20803							0.1332158624740032
LLLWALAPL	9	Unmodified	_LLLWALAPL_					0	0	0			REV__ENSG00000224940|ENST00000446477|PRRT4	REV__ENSG00000224940|ENST00000446477|PRRT4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	505.325871	1008.63719	-1.3434	-0.00067885	-2.741	-0.0013851	-4.0844	-0.002064	505.3243696058118	80.768	1.0184	80.873	80.498	81.517	0.10526	-0.007003	0.00096908	NaN	49.211	64	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	628090	+		31485	23735	20793	20803							0.1332158624740032
LLLWLLSY	8	Unmodified	_LLLWLLSY_					0	0	0		ENSG00000281991|ENST00000615541|TMEM265	ENSG00000281991|ENST00000615541|TMEM265	ENSG00000281991|ENST00000615541|TMEM265	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8070373535156	2	510.810054	1019.60555	-0.73645	-0.00037618	-3.2575	-0.0016639	-3.9939	-0.0020401	510.8082934270074	59.191	2.0163	59.584	59.024	61.04	0.39209					108	51	4	0	0	0	0.37625	2	6181	6181;6267		81.716	12.372	1	5833600			31486	9052	20794	20804	35908;35909	35908					0.09653593493476365
LLLWLLSY	8	Unmodified	_LLLWLLSY_					0	0	0		ENSG00000281991|ENST00000615541|TMEM265	ENSG00000281991|ENST00000615541|TMEM265	ENSG00000281991|ENST00000615541|TMEM265	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.80816650390625	2	510.810054	1019.60555	0.27961	0.00014283	-4.3779	-0.0022363	-4.0983	-0.0020935	510.8077099977189	59.078	1.6124	59.631	59.172	60.785	0.55323					90	41	3	0	0	0	0.095987	3	6190	6180;6190;6281		120.06	29.281	1	5552900			31487	9052	20794	20804	35910;35911;35912	35911					0.09653593493476365
LLLWREIKTQW	11	Unmodified	_LLLWREIKTQW_					0	0	0		ENST00000499900.2_1_5:177045699-177046068:+|nuORF	ENST00000499900.2_1_5:177045699-177046068:+|nuORF	ENST00000499900.2_1_5:177045699-177046068:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.9588317871094	3	495.9574	1484.85037	-0.73867	-0.00036635	4.4593	0.0022116	3.7207	0.0018453	495.9590677290455	104.07	2.3788	104.07	103.26	105.64	0					153	57	4	0	0	0	0.77511	1	10689	10689		16.53	3.5724	1	779320			31488	12836	20795	20805	35913	35913					0.12733847236449947
LLLYELKGL	9	Unmodified	_LLLYELKGL_					0	0	0			REV__ENSG00000099769|ENST00000215539|IGFALS	REV__ENSG00000099769|ENST00000215539|IGFALS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3336791992188	2	531.333893	1060.65323	0.60185	0.00031978	-0.57578	-0.00030593	0.026065	1.3849E-05	531.3334748981565	77.492	1.9296	77.897	77.547	79.477	0.40531					108	45	4	0	0	0	0.38563	1	8886	8886		58.782	4.0056	1	5041200	+		31489	17101	20796	20806	35914	35914					0.12533247693681915
LLLYGVLFLL	10	Unmodified	_LLLYGVLFLL_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|168|1|anti-sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|168|1|anti-sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|168|1|anti-sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.353515625	2	582.375561	1162.73657	-0.84103	-0.0004898	2.7632	0.0016092	1.9222	0.0011194	582.3769371365654	103.46	0.20508	103.47	103.32	103.52	0.0082016					7	4	3	0	0	0	0.37624	1	11121	11121		12.959	0	1	296310			31490	14503	20797	20807	35915	35915					0.16170984141513145
LLLYGVLFLL	10	Unmodified	_LLLYGVLFLL_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|168|1|anti-sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|168|1|anti-sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|168|1|anti-sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3534545898438	2	582.375561	1162.73657	0.88319	0.00051435	-2.4604	-0.0014329	-1.5772	-0.00091852	582.3740070561229	103.37	0.61427	103.5	103.17	103.79	0.12622					36	15	3	0	0	0	0.37624	1	10894	10894		19.36	0	1	1043800			31491	14503	20797	20807	35916	35916					0.16170984141513145
LLLYIGMPKTT	11	Unmodified	_LLLYIGMPKTT_					0	0	0			REV__ENST00000555259.5_1_14:31112578-31185169:+|nuORF	REV__ENST00000555259.5_1_14:31112578-31185169:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	625.3678588867188	2	625.364867	1248.71518	1.3576	0.00084901	0.83428	0.00052173	2.1919	0.0013707	625.3650849752331	102.87	0.55746	103.05	102.8	103.36	0.18297					34	13	3	0	0	0	0.60058	1	10875	10875		44.377	0.7264	1	5658400	+		31492	28680	20798	20808	35917	35917					0.10077231050468072
LLLYRWIMVF	10	Unmodified	_LLLYRWIMVF_					0	0	0			REV__ENST00000436104.6_1_16:67862410-67864187:-|nuORF	REV__ENST00000436104.6_1_16:67862410-67864187:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9328308105469	3	451.929905	1352.76789	2.3813	0.0010762	3.8023	0.0017184	6.1836	0.0027945	451.9315121357165	99.085	2.2621	99.03	97.603	99.866	-0.054817					133	52	3	0	0	0	0.86587	1	10727	10727		29.17	9.9074	1	545200	+		31493	26687	20799	20809	35918	35918					0.10561233903922584
LLLYRWIMVF	10	Unmodified	_LLLYRWIMVF_					0	0	0			REV__ENST00000436104.6_1_16:67862410-67864187:-|nuORF	REV__ENST00000436104.6_1_16:67862410-67864187:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9326171875	3	451.929905	1352.76789	2.5866	0.001169	3.5327	0.0015965	6.1193	0.0027655	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.85834	3	10914	10914;10986;10998		29.17	4.0441	1	1152500	+		31494	26687	20799	20809	35919;35920;35921	35919					0.10561233903922584
LLLYSKLIL	9	Unmodified	_LLLYSKLIL_					0	0	0		ENST00000374583.1_1_X:68383083-68383194:-|nuORF	ENST00000374583.1_1_X:68383083-68383194:-|nuORF	ENST00000374583.1_1_X:68383083-68383194:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3265380859375	2	538.359911	1074.70527	0.072435	3.8996E-05	-0.65501	-0.00035263	-0.58258	-0.00031364	538.3569085920168	100.81	0.60608	101.02	100.67	101.28	0.2058					19	14	3	0	0	0	0.20789	1	10555	10555		17.365	5.1581	1	276820			31495	10782	20800	20810	35922	35922					0.1709041110743783
LLMCFAGFSF	10	Unmodified	_LLMCFAGFSF_					0	0	0		nc|ENSG00000164037|Q4ZJI4-2|SLC9B1;nc|ENSG00000183704|A6NJY1|SLC9B1P1;ENST00000504216.5_1_4:103822276-103853306:-|nuORF;nc|ENSG00000164037|Q4ZJI4-3|SLC9B1;ENSG00000164037|ENST00000296422|SLC9B1	nc|ENSG00000164037|Q4ZJI4-2|SLC9B1	nc|ENSG00000164037|Q4ZJI4-2|SLC9B1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3305053710938	2	568.269381	1134.52421	-0.43878	-0.00024934	-0.22239	-0.00012638	-0.66117	-0.00037572	568.2692275918625	88.98	0.40746	89.451	89.314	89.721	0.47068					19	9	3	0	0	0	0.37624	1	10555	10555		24.203	0	1	183970			31496	5905	20801	20811	35923	35923					-0.03767173532446577
LLMDDQQEL	9	Unmodified	_LLMDDQQEL_					0	0	0			REV__ENSG00000180346|ENST00000603357|TIGD2	REV__ENSG00000180346|ENST00000603357|TIGD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.7830810546875	2	552.765714	1103.51688	-0.79693	-0.00044052	1.0859	0.00060026	0.28899	0.00015974	552.766000049062	74.554	0.61208	74.946	74.582	75.194	0.39111					25	14	2	0	0	0	0.20789	1	8351	8351		53.351	2.016	1	185100	+		31497	22392	20802	20812	35924	35924					-0.030742345991711773
LLMFLLGLNG	10	Unmodified	_LLMFLLGLNG_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H;REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I;REV__ENSG00000006283|ENST00000359106|CACNA1G	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.1612548828125	2	545.820095	1089.62564	-1.5383	-0.00083963	-0.56013	-0.00030573	-2.0984	-0.0011454	546.3230439881083	44.106	0.20778	44.95	44.778	44.986	0.84438					5	4	2	0	0	0	0.37624	1	4043	4043		23.042	0	1	45390	+		31498	23145;17176;16099	20803	20813	35925	35925					0.08441021161797835
LLMGKQPL	8	Unmodified	_LLMGKQPL_					0	0	0			REV__ENST00000379598.9_1_20:3786205-3786352:+|nuORF	REV__ENST00000379598.9_1_20:3786205-3786352:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.27386474609375	2	450.272781	898.531009	1.3234	0.00059587	2.0996	0.00094537	3.4229	0.0015412	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.87276	1	10123	10123		29.842	1.5873	1	51698000	+		31499	25925	20804	20814	35926	35926					0.07768507410446546
LLMGKQPL	8	Unmodified	_LLMGKQPL_					0	0	0			REV__ENST00000379598.9_1_20:3786205-3786352:+|nuORF	REV__ENST00000379598.9_1_20:3786205-3786352:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7545166015625	2	450.272781	898.531009	0.83274	0.00037496	3.44	0.0015489	4.2728	0.0019239	450.2742637446137	81.845	1.6861	81.903	81.296	82.982	0.057816					103	38	4	0	0	0	0.4196	1	8111	8111		37.028	17.669	1	478780	+		31500	25925	20804	20814	35927	35927					0.07768507410446546
LLMGQKIP	8	Unmodified	_LLMGQKIP_					0	0	0			REV__ENSG00000157985|ENST00000304032|AGAP1;REV__nc|ENSG00000204172|Q5VTM2|AGAP9;REV__nc|ENSG00000264204|Q5VUJ5|AGAP7P	REV__nc|ENSG00000204172|Q5VTM2|AGAP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2742919921875	2	450.272781	898.531009	1.7291	0.00077856	1.6772	0.00075519	3.4063	0.0015338	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.87276	1	10177	10177		29.842	4.3914	1	51820000	+		31501	30158;30254;20575	20805	20815	35928	35928					0.07768507410446546
LLMHPTGE	8	Unmodified	_LLMHPTGE_					0	0	0			REV__nc|ENSG00000185024|Q92994-6|BRF1	REV__nc|ENSG00000185024|Q92994-6|BRF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2318115234375	2	449.228571	896.442588	0.59617	0.00026782	3.8501	0.0017296	4.4462	0.0019974	449.2302610410389	83.151	3.4859	83.298	82.027	85.513	0.14694					178	80	3	0	0	0	0.88915	1	8041	8041		35.201	0	1	225870	+		31502	22729	20806	20816	35929	35929					-0.009775329000149213
LLMIPLCVPLP	11	Unmodified	_LLMIPLCVPLP_					0	0	0			REV__ENSG00000069764|ENST00000438167|PLA2G10	REV__ENSG00000069764|ENST00000438167|PLA2G10	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.859619140625	2	604.860906	1207.70726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.136	1	81.247	80.747	81.747	0.1114								0	0	0	0.56276	1	7715	7715		60.294	24.676	1		+		31503	16586	20807	20817	35930	35930					0.11171380529367525
LLMKAFMPN	9	Unmodified	_LLMKAFMPN_					0	0	0			REV__nc|ENSG00000101452|Q9H5Z1-2|DHX35	REV__nc|ENSG00000101452|Q9H5Z1-2|DHX35	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8170776367188	2	532.785198	1063.55584	1.9083	0.0010167	1.4963	0.00079723	3.4047	0.001814	532.785779683441	100.65	0.72578	100.95	100.65	101.37	0.2999					34	17	3	0	0	0	0.20789	1	12236	12236		24.203	5.0992	1	640410	+		31504	17282	20808	20818	35931	35931					0.026608192215007875
LLMKLGQP	8	Unmodified	_LLMKLGQP_					0	0	0			REV__ENSG00000165392|ENST00000298139|WRN	REV__ENSG00000165392|ENST00000298139|WRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2741394042969	2	450.272781	898.531009	1.7291	0.00077856	1.6772	0.00075519	3.4063	0.0015338	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.86288	1	10250	10250		26.796	1.3459	1	51820000	+		31505	21180	20809	20819	35932	35932					0.07768507410457914
LLMLLGPL	8	Unmodified	_LLMLLGPL_					0	0	0			REV__ENST00000528377.1_1_11:67375903-67377304:+|nuORF	REV__ENST00000528377.1_1_11:67375903-67377304:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.30029296875	2	435.280075	868.545597	0.4751	0.0002068	-0.098302	-4.2789E-05	0.3768	0.00016401	435.27992781568327	71.755	0.31332	71.885	71.798	72.111	0.1301					18	12	3	0	0	0	0.4196	1	6575	6575		10.185	0	1	39164	+		31506	28246	20810	20820	35933	35933					0.10606579558577778
LLMLLLADM	9	Unmodified	_LLMLLLADM_					0	0	0		ENST00000494396.5_1_X:49055339-49056651:-|nuORF	ENST00000494396.5_1_X:49055339-49056651:-|nuORF	ENST00000494396.5_1_X:49055339-49056651:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.793212890625	2	516.795232	1031.57591	-0.27075	-0.00013992	-3.2078	-0.0016578	-3.4785	-0.0017977	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.76996	1	8672	8672		33.516	1.9858	1	817800			31507	12748	20811	20821	35934	35934					0.061385701614653954
LLMLLRFRLFI	11	Unmodified	_LLMLLRFRLFI_					0	0	0			REV__ENST00000380693.7_1_X:11777873-11777969:+|nuORF	REV__ENST00000380693.7_1_X:11777873-11777969:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27850341796875	3	478.972104	1433.89448	-0.099231	-4.7529E-05	4.1797	0.002002	4.0805	0.0019544	478.9743573186434	80.793	0.12471	80.855	80.797	80.921	0.062225					4	2	2	0	0	0	0.18028	1	7932	7932		14.694	0.60766	1	32236	+		31508	25950	20812	20822	35935	35935					0.19489160129091943
LLMLVELAM	9	Unmodified	_LLMLVELAM_					0	0	0			REV__ENSG00000149507|ENST00000278855|OOSP2	REV__ENSG00000149507|ENST00000278855|OOSP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7931518554688	2	516.795232	1031.57591	-0.87095	-0.0004501	-2.9306	-0.0015145	-3.8016	-0.0019646	516.7937641781077	86.407	2.8089	86.407	84.831	87.64	0					132	64	4	0	0	0	0.76996	1	8231	8231		33.516	1.5607	1	210980	+		31509	20176	20813	20823	35936	35936					0.061385701614653954
LLMLVELAM	9	Unmodified	_LLMLVELAM_					0	0	0			REV__ENSG00000149507|ENST00000278855|OOSP2	REV__ENSG00000149507|ENST00000278855|OOSP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7938232421875	2	516.795232	1031.57591	-1.5587	-0.00080555	-1.8904	-0.00097695	-3.4492	-0.0017825	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.69914	1	8773	8773		40.573	8.6178	1	755180	+		31510	20176	20813	20823	35937	35937					0.061385701614653954
LLMNKHRA	8	Unmodified	_LLMNKHRA_					0	0	0			REV__chr14:35292877-35307994|35|45.74|0.0|22.13|+|0|None,PSMA6|1	REV__chr14:35292877-35307994|35|45.74|0.0|22.13|+|0|None,PSMA6|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.31951904296875	2	491.784379	981.554204	-0.76756	-0.00037747	4.1332	0.0020326	3.3656	0.0016552	491.7866040055102	15.979	0.13883	16.027	15.966	16.105	0.047803					8	5	2	0	0	0	0.4196	1	99	99		19.36	0	1	22483	+		31511	15592	20814	20824	35938	35938					0.06268946247769236
LLMSLVLW	8	Unmodified	_LLMSLVLW_					0	0	0		ENST00000304916.3_1_8:127565347-127565449:-|nuORF	ENST00000304916.3_1_8:127565347-127565449:-|nuORF	ENST00000304916.3_1_8:127565347-127565449:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7907409667969	2	487.790807	973.56706	0.6235	0.00030414	-1.5237	-0.00074322	-0.90016	-0.00043909	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.83466	1	8010	8010		23.037	1.3344	1	479320			31512	9844	20815	20825	35939	35939					0.07921964587285402
LLMTTGWLP	9	Unmodified	_LLMTTGWLP_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3138427734375	2	516.283346	1030.55214	2.799	0.0014451	-0.73419	-0.00037905	2.0648	0.001066	516.7842248202214	99.657	0.46274	99.603	99.36	99.823	-0.053734					15	10	2	0	0	0	0.20789	1	10803	10803		40.573	27.613	1	181930	+		31513	17672	20816	20826	35940	35940					0.03808472719288147
LLMTTGWLP	9	Unmodified	_LLMTTGWLP_					0	0	0			REV__nc|ENSG00000107736|Q9H251-4|CDH23	REV__nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.31396484375	2	516.283346	1030.55214	-0.25993	-0.0001342	1.15	0.00059375	0.89012	0.00045955	516.2836408538383	99.583	0.29305	99.806	99.571	99.864	0.22262					10	6	2	0	0	0	0.20789	1	10360	10360		42.474	6.8562	1	79243	+		31514	17672	20816	20826	35941	35941					0.03808472719288147
LLMTVANNL	9	Unmodified	_LLMTVANNL_					0	0	0		ENST00000441308.1_1_20:10367413-10367935:+|nuORF	ENST00000441308.1_1_20:10367413-10367935:+|nuORF	ENST00000441308.1_1_20:10367413-10367935:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7798767089844	2	494.778428	987.542302	0.77019	0.00038107	2.7304	0.001351	3.5006	0.001732	494.77966004867045	84.042	2.7013	83.973	82.365	85.067	-0.069313					89	62	2	0	0	0	0.78983	1	8606	8606		27.882	2.4321	1	283830			31515	11781	20817	20827	35942	35942					0.048032847138983925
LLMVGNLIIIP	11	Unmodified	_LLMVGNLIIIP_					0	0	0		ENSG00000138622|ENST00000261917|HCN4	ENSG00000138622|ENST00000261917|HCN4	ENSG00000138622|ENST00000261917|HCN4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.3831176757812	2	598.377778	1194.741	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.868	1	21.852	21.352	22.352	-0.016428								0	0	0	0.56276	1	619	619		30.504	2.6214	1				31516	4309	20818	20828	35943	35943					0.15142125292800301
LLMYLMDLT	9	Unmodified	_LLMYLMDLT_					0	0	0		ENST00000553336.5_1_14:23938909-23944520:+|nuORF;nc|ENSG00000129460|Q8NEJ9-2|NGDN;ENSG00000129460|ENST00000408901|NGDN	ENST00000553336.5_1_14:23938909-23944520:+|nuORF	ENST00000553336.5_1_14:23938909-23944520:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.7847900390625	2	556.790146	1111.56574	-0.44764	-0.00024924	1.4962	0.00083309	1.0486	0.00058385	556.7909383482148	37.026	0.48629	36.972	36.783	37.27	-0.053558					16	10	2	0	0	0	0.20789	1	2478	2478		13.775	0	1	59430			31517	13697	20819	20829	35944	35944					0.014419624362290051
LLNDIVVFV	9	Unmodified	_LLNDIVVFV_					0	0	0			REV__ENSG00000280204|ENST00000641544|OR1S1	REV__ENSG00000280204|ENST00000641544|OR1S1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3145141601562	2	516.310418	1030.60628	3.0984	0.0015997	4.0844	0.0021088	7.1828	0.0037085	516.3124899317548	102.33	1.1091	102.29	101.92	103.03	-0.047005					68	26	3	0	0	0	0.62081	3	11190	11178;11190;11251		45.952	1.8352	1	756390	+		31518	24046	20820	20830	35945;35946;35947	35946					0.0922038814253483
LLNDIVVFV	9	Unmodified	_LLNDIVVFV_					0	0	0			REV__ENSG00000280204|ENST00000641544|OR1S1	REV__ENSG00000280204|ENST00000641544|OR1S1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.814453125	2	516.310418	1030.60628	3.1012	0.0016012	3.8274	0.0019761	6.9286	0.0035773	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.78058	1	13133	13133		30.504	6.3009	1	1162600	+		31519	24046	20820	20830	35948	35948					0.0922038814253483
LLNDIVVFV	9	Unmodified	_LLNDIVVFV_					0	0	0			REV__ENSG00000280204|ENST00000641544|OR1S1	REV__ENSG00000280204|ENST00000641544|OR1S1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	516.310418	1030.60628	2.7992	0.0014453	4.0768	0.0021049	6.8761	0.0035502	516.3126622311364	101.76	1.185	102.08	101.74	102.92	0.3251	-0.23151	-0.0027569	NaN	45.952	60	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199080	+		31520	24046	20820	20830							0.0922038814253483
LLNELFYN	8	Unmodified	_LLNELFYN_					0	0	0			REV__ENSG00000023330|ENST00000484952|ALAS1	REV__ENSG00000023330|ENST00000484952|ALAS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.2687377929688	2	513.26875	1024.52295	-0.34568	-0.00017743	-0.34671	-0.00017795	-0.69238	-0.00035538	513.2681850311778	76.031	0.90755	76.156	75.674	76.581	0.12485					50	27	3	0	0	0	0.8347	1	7098	7098		23.042	0	1	111040	+		31521	16250	20821	20831	35949	35949					0.011666516946661432
LLNFLRSH	8	Unmodified	_LLNFLRSH_					0	0	0		nc|ENSG00000133027|Q9UBM1|PEMT;nc|ENSG00000133027|Q9UBM1-3|PEMT;ENSG00000133027|ENST00000255389|PEMT	nc|ENSG00000133027|Q9UBM1|PEMT	nc|ENSG00000133027|Q9UBM1|PEMT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.2650451660156	2	500.290351	998.566149	-0.23142	-0.00011578	-1.903	-0.00095205	-2.1344	-0.0010678	500.28911991910974	48.128	0.485	49.051	48.744	49.229	0.92315					18	11	2	0	0	0	0.4196	1	4636	4636		40.573	0	1	244550			31522	3849	20822	20832	35950	35950					0.06680886262608965
LLNGGTAKQTG	11	Unmodified	_LLNGGTAKQTG_					0	0	0		ENST00000431800.1_1_1:44514133-44516987:+|nuORF	ENST00000431800.1_1_1:44514133-44516987:+|nuORF	ENST00000431800.1_1_1:44514133-44516987:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2930908203125	2	530.293288	1058.57202	2.0317	0.0010774	-1.9029	-0.0010091	0.12876	6.828E-05	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.62614	1	9420	9420		41.427	0.85399	1	1811300			31523	11653	20823	20833	35951	35951					0.04507939983614051
LLNGGTAKQTG	11	Unmodified	_LLNGGTAKQTG_					0	0	0		ENST00000431800.1_1_1:44514133-44516987:+|nuORF	ENST00000431800.1_1_1:44514133-44516987:+|nuORF	ENST00000431800.1_1_1:44514133-44516987:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.29296875	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.68532	1	9306	9306		33.922	4.7516	1	1864800			31524	11653	20823	20833	35952	35952					0.04507939983614051
LLNGGTAKQTG	11	Unmodified	_LLNGGTAKQTG_					0	0	0		ENST00000431800.1_1_1:44514133-44516987:+|nuORF	ENST00000431800.1_1_1:44514133-44516987:+|nuORF	ENST00000431800.1_1_1:44514133-44516987:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2928466796875	2	530.293288	1058.57202	-0.066725	-3.5384E-05	0.20402	0.00010819	0.1373	7.2808E-05	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.45992	1	8982	8982		54.722	11.858	1	2084800			31525	11653	20823	20833	35953	35953					0.04507939983614051
LLNGGTAKQTG	11	Unmodified	_LLNGGTAKQTG_					0	0	0		ENST00000431800.1_1_1:44514133-44516987:+|nuORF	ENST00000431800.1_1_1:44514133-44516987:+|nuORF	ENST00000431800.1_1_1:44514133-44516987:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2933349609375	2	530.293288	1058.57202	-1.5163	-0.00080409	1.7205	0.00091237	0.2042	0.00010828	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.67778	1	9036	9036		35.152	1.2304	1	1686700			31526	11653	20823	20833	35954	35954					0.04507939983614051
LLNGMITVM	9	Unmodified	_LLNGMITVM_					0	0	0			REV__ENSG00000181958|ENST00000641526|OR4A15	REV__ENSG00000181958|ENST00000641526|OR4A15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.26837158203125	2	496.269381	990.524209	-0.74503	-0.00036973	0.21165	0.00010504	-0.53337	-0.0002647	496.26945846614535	64.531	0.46819	64.917	64.607	65.075	0.3863					13	10	2	0	0	0	0.43338	1	6975	6975		55.504	0.73953	1	70160	+		31527	22490	20824	20834	35955	35955					0.028568264675527644
LLNGPMGR	8	Unmodified	_LLNGPMGR_					0	0	0		ENST00000542541.6_1_19:19050705-19050816:-|nuORF	ENST00000542541.6_1_19:19050705-19050816:-|nuORF	ENST00000542541.6_1_19:19050705-19050816:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	429.2358093261719	2	429.23673	856.458907	-1.5383	-0.00066028	-0.7324	-0.00031437	-2.2707	-0.00097466	429.23631228522396	63.563	2.4446	63.563	62.881	65.325	0					341	112	4	0	0	0	0.85277	1	5584	5584		25.45	3.7478	1	5885000			31528	13537	20825	20835	35956	35956					0.024935930567380638
LLNGPMGR	8	Unmodified	_LLNGPMGR_					0	0	0		ENST00000542541.6_1_19:19050705-19050816:-|nuORF	ENST00000542541.6_1_19:19050705-19050816:-|nuORF	ENST00000542541.6_1_19:19050705-19050816:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	429.2355041503906	2	429.23673	856.458907	-0.17888	-7.6781E-05	-2.1976	-0.0009433	-2.3765	-0.0010201	429.2356452046458	63.375	2.3242	63.37	62.729	65.053	-0.0055504					274	88	5	0	0	0	0.87922	2	5887	5887;5895		47.916	5.4411	1	5346500			31529	13537	20825	20835	35957;35958	35957					0.024935930567380638
LLNGPMGR	8	Unmodified	_LLNGPMGR_					0	0	0		ENST00000542541.6_1_19:19050705-19050816:-|nuORF	ENST00000542541.6_1_19:19050705-19050816:-|nuORF	ENST00000542541.6_1_19:19050705-19050816:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.2357177734375	2	429.23673	856.458907	0.39501	0.00016955	-2.731	-0.0011722	-2.336	-0.0010027	429.2354268655387	63.129	2.3304	63.252	62.677	65.007	0.12252					259	94	5	0	0	0	0.91977	2	5536	5528;5536		47.916	12.436	1	5976700			31530	13537	20825	20835	35959;35960	35960					0.024935930567380638
LLNGQCNQIC	10	Unmodified	_LLNGQCNQIC_					0	0	0			REV__nc|ENSG00000101109|Q13043-2|STK4	REV__nc|ENSG00000101109|Q13043-2|STK4	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.2667236328125	2	553.260076	1104.5056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.11	1	73.239	72.739	73.739	0.1292								0	0	0	0.45132	1	6721	6721		26.693	0	1		+		31531	29743	20826	20836	35961	35961					-0.04247335174272848
LLNGSGDFL	9	Unmodified	_LLNGSGDFL_					0	0	0			REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2452087402344	2	468.245275	934.475997	0.1062	4.9729E-05	-0.063897	-2.992E-05	0.042305	1.9809E-05	468.2450979766261	47.531	1.8726	47.521	47.036	48.909	-0.0093269					110	52	3	0	0	0	0.25483	1	3872	3872		68.787	5.4806	1	1766700	+		31532	25018	20827	20837	35962	35962					0.006137921435311
LLNGSGDFL	9	Unmodified	_LLNGSGDFL_					0	0	0			REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.24554443359375	2	468.245275	934.475997	-0.76235	-0.00035697	0.76559	0.00035848	0.0032383	1.5163E-06	468.24549296496195	47.46	2.028	47.434	46.94	48.968	-0.026737					112	56	3	0	0	0	0.51307	1	3988	3988		51.335	0	1	1887700	+		31533	25018	20827	20837	35963	35963					0.006137921435311
LLNGSGDFL	9	Unmodified	_LLNGSGDFL_					0	0	0			REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2449035644531	2	468.245275	934.475997	-0.58318	-0.00027307	0.68145	0.00031909	0.098267	4.6013E-05	468.24540363646156	47.508	2.0762	47.505	46.933	49.01	-0.002449					126	59	4	0	0	0	0.35373	1	3868	3868		60.972	0	1	1948700	+		31534	25018	20827	20837	35964	35964					0.006137921435311
LLNGSGDFL	9	Unmodified	_LLNGSGDFL_					0	0	0			REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.2445373535156	2	468.245275	934.475997	-1.0647	-0.00049855	0.99639	0.00046656	-0.06832	-3.199E-05	468.2456241225619	47.383	3.6723	47.402	45.915	49.587	0.018967					223	102	4	0	0	0	0.35373	1	3591	3591		60.972	0.67798	1	7165000	+		31535	25018	20827	20837	35965	35965					0.006137921435311
LLNGSGDFL	9	Unmodified	_LLNGSGDFL_					0	0	0			REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.24462890625	2	468.245275	934.475997	0.29201	0.00013673	-0.21451	-0.00010045	0.0775	3.6289E-05	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.51307	1	3517	3517		51.335	1.3109	1	7645500	+		31536	25018	20827	20837	35966	35966					0.006137921435311
LLNGSGDFL	9	Unmodified	_LLNGSGDFL_					0	0	0			REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	REV__ENST00000321870.2_1_8:65492938-65493277:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.244873046875	2	468.245275	934.475997	-0.27928	-0.00013077	0.30581	0.00014319	0.026523	1.2419E-05	468.2452890208871	47.437	2.6016	47.349	46.711	49.313	-0.08765					186	72	4	0	0	0	0.35373	1	3568	3568		60.972	0.67798	1	6668700	+		31537	25018	20827	20837	35967	35967					0.006137921435311
LLNILQPFLH	10	Unmodified	_LLNILQPFLH_					0	0	0		ENST00000502675.1_19:20577295-20577979:-|nuORF	ENST00000502675.1_19:20577295-20577979:-|nuORF	ENST00000502675.1_19:20577295-20577979:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.359619140625	2	604.363516	1206.71248	2.4669	0.0014909	3.1059	0.0018771	5.5729	0.003368	604.3653535366857	106.62	0.69669	106.75	106.42	107.11	0.12742					48	30	2	0	0	0	0.76096	1	12961	12961		55.504	14.726	1	128570			31538	12859	20828	20838	35968	35968					0.11739143707836774
LLNKERKK	8	Unmodified	_LLNKERKK_					0	0	0		chr1:172161873-172253573|14|10.14|0.0|19.95|+|1|TE_info:L3b,L3b_dup617,CR1,LINE,donor,+,172161648,172161873|None,DNM3|9	chr1:172161873-172253573|14|10.14|0.0|19.95|+|1|TE_info:L3b,L3b_dup617,CR1,LINE,donor,+,172161648,172161873|None,DNM3|9	chr1:172161873-172253573|14|10.14|0.0|19.95|+|1|TE_info:L3b,L3b_dup617,CR1,LINE,donor,+,172161648,172161873|None,DNM3|9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.8328857421875	2	514.832383	1027.65021	0.22146	0.00011401	-0.034722	-1.7876E-05	0.18674	9.6138E-05	514.8320535680291	20.785	0.53633	20.155	19.9	20.436	-0.6296					22	12	3	0	0	0	0.90983	1	693	693		42.396	0	1	117210			31539	29	20829	20839	35969	35969					0.13749417359508698
LLNLGHLLNDS	11	Unmodified	_LLNLGHLLNDS_					0	0	0			REV__nc|ENSG00000197705|Q9P2G3-2|KLHL14	REV__nc|ENSG00000197705|Q9P2G3-2|KLHL14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.8366088867188	2	604.83532	1207.65609	0.44894	0.00027153	0.066985	4.0515E-05	0.51593	0.00031205	604.8348226028828	50.147	0.59085	50.189	49.888	50.479	0.04224					39	15	4	0	0	0	0.69071	1	3957	3957		23.523	0	1	318840	+		31540	23261	20830	20840	35970	35970					0.06056471080546544
LLNLQEKLTK	10	Unmodified	_LLNLQEKLTK_					0	0	0			REV__nc|ENSG00000173230|Q14789-4|GOLGB1	REV__nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2554626464844	3	400.583451	1198.72852	1.9305	0.00077331	-2.1352	-0.00085533	-0.20475	-8.202E-05	400.5824590147518	18.671	0.23453	18.194	18.03	18.264	-0.47694					6	4	2	0	0	0	0.37624	1	403	403		36.318	9.2703	1	22078	+		31541	21904	20831	20841	35971	35971					0.1371080515407357
LLNNNKKTT	9	Unmodified	_LLNNNKKTT_					0	0	0		ENST00000552054.1_1_12:115118611-115121104:-|nuORF	ENST00000552054.1_1_12:115118611-115121104:-|nuORF	ENST00000552054.1_1_12:115118611-115121104:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3031616210938	2	523.303655	1044.59276	-0.040375	-2.1128E-05	0.20473	0.00010713	0.16435	8.6006E-05	523.3035989730673	101.38	1.8608	101.41	100.39	102.25	0.031036					84	43	4	0	0	0	0.77244	1	10832	10832		32.812	6.1195	1	1068900			31542	13677	20832	20842	35972	35972					0.07224530363282611
LLNNNKKTT	9	Unmodified	_LLNNNKKTT_					0	0	0		ENST00000552054.1_1_12:115118611-115121104:-|nuORF	ENST00000552054.1_1_12:115118611-115121104:-|nuORF	ENST00000552054.1_1_12:115118611-115121104:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3035278320312	2	523.303655	1044.59276	2.1374	0.0011185	-1.9743	-0.0010331	0.16314	8.5373E-05	523.3025163753626	100.8	0.70826	101.1	100.73	101.44	0.2999					53	17	4	0	0	0	0.76764	1	12222	12222		34.173	6.2903	1	971240			31543	13677	20832	20842	35973	35973					0.07224530363282611
LLNPGLVIAIN	11	Unmodified	_LLNPGLVIAIN_					0	0	0			REV__ENST00000466097.1_1_22:38042800-38046733:+|nuORF	REV__ENST00000466097.1_1_22:38042800-38046733:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8545532226562	2	568.855524	1135.69649	-1.3907	-0.00079112	-2.9165	-0.001659	-4.3072	-0.0024502	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.6921	1	10921	10921		32.812	4.9302	1	72465000	+		31544	17136	20833	20843	35974	35974					0.1340743747093711
LLNQLRSGT	9	Unmodified	_LLNQLRSGT_					0	0	0		ENSG00000198198|ENST00000634258|SZT2;nc|ENSG00000198198|Q5T011-5|SZT2;nc|ENSG00000198198|Q5T011-4|SZT2	ENSG00000198198|ENST00000634258|SZT2	ENSG00000198198|ENST00000634258|SZT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2903137207031	2	501.290548	1000.56654	-0.063891	-3.2028E-05	0.54767	0.00027454	0.48378	0.00024251	501.2905870572702	99.607	2.095	99.648	98.964	101.06	0.041107					107	48	4	0	0	0	0.7932	1	10583	10583		25.574	1.3713	1	1073000			31545	8253	20834	20844	35975	35975					0.06628261191792717
LLNQSISPLS	10	Unmodified	_LLNQSISPLS_					0	0	0		nc|ENSG00000091656|Q86UP3|ZFHX4;nc|ENSG00000091656|Q86UP3-4|ZFHX4;nc|ENSG00000091656|Q86UP3-2|ZFHX4;ENSG00000091656|ENST00000651372|ZFHX4;nc|ENSG00000091656|Q86UP3-3|ZFHX4;ENST00000458716.2_1_8:77616323-77620415:+|nuORF	nc|ENSG00000091656|Q86UP3|ZFHX4	nc|ENSG00000091656|Q86UP3|ZFHX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.308349609375	2	536.305864	1070.59717	-0.059482	-3.19E-05	-0.42359	-0.00022718	-0.48308	-0.00025908	536.3054418029333	47.392	0.53305	47.411	47.099	47.632	0.018967					23	15	2	0	0	0	0.37206	1	3544	3544		66.429	0	1	236140			31546	1681	20835	20845	35976	35976					0.06469994786198185
LLNRHAPVR	9	Unmodified	_LLNRHAPVR_					0	0	0			REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326904296875	2	538.327799	1074.64105	-1.4902	-0.00080221	0.37298	0.00020079	-1.1172	-0.00060142	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.78536	1	12499	12499		29.15	4.6304	1	4041000	+		31547	19240	20836	20846	35977	35977					0.1067106879381754
LLNSLLPLE	9	Unmodified	_LLNSLLPLE_					0	0	0		ENST00000532317.5_1_11:85669958-85670087:-|nuORF	ENST00000532317.5_1_11:85669958-85670087:-|nuORF	ENST00000532317.5_1_11:85669958-85670087:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3108825683594	2	506.307875	1010.6012	-0.62631	-0.00031711	3.637	0.0018415	3.0107	0.0015244	506.31007289516646	61.122	1.0995	61.13	60.064	61.164	0.0081215					63	39	2	0	0	0	0.7932	1	5236	5236		24.203	2.5004	1	191720			31548	13374	20837	20847	35978	35978					0.09632084279905939
LLNSMKSII	9	Unmodified	_LLNSMKSII_					0	0	0		nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;ENSG00000141837|ENST00000360228|CACNA1A;ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000141837|O00555-5|CACNA1A;ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8031311035156	2	509.801903	1017.58925	0.54005	0.00027532	3.4914	0.0017799	4.0315	0.0020552	509.80356957278343	84.302	2.3533	84.749	83.349	85.703	0.44736					134	57	3	0	0	0	0.71772	1	9817	9817		39.253	3.6345	1	950450			31549	14984;4960;4530	20838	20848	35979	35979					0.08116144265068215
LLNTSYTHSQ	10	Unmodified	_LLNTSYTHSQ_					0	0	0		nc|ENSG00000090534|P40225-3|THPO;nc|ENSG00000090534|P40225-2|THPO;ENSG00000090534|ENST00000647395|THPO	nc|ENSG00000090534|P40225-3|THPO	nc|ENSG00000090534|P40225-3|THPO	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3541259765625	2	582.288202	1162.56185	-0.28503	-0.00016597	-1.7242	-0.001004	-2.0093	-0.00117	582.2871438575391	103.67	0.19709	103.67	103.56	103.76	0					6	4	2	0	0	0	0.37624	1	10635	10635		31.634	1.1306	1	106100			31550	1648	20839	20849	35980	35980					-0.01292667741608966
LLNVSTPKS	9	Unmodified	_LLNVSTPKS_					0	0	0		ENSG00000176208|ENST00000321990|ATAD5;ENST00000585133.1_1_17:29162236-29196669:+|nuORF;nc|ENSG00000176208|Q96QE3-2|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.7816162109375	2	479.782025	957.549496	-0.74687	-0.00035834	-0.27906	-0.00013389	-1.0259	-0.00049222	479.7817119155876	42.804	0.53654	43.237	42.924	43.46	0.4334					34	12	4	0	0	0	0.25415	1	3841	3841		68.846	1.8842	1	2374200			31551	7064	20840	20850	35981	35981					0.0690234058599799
LLPAAAVTS	9	Unmodified	_LLPAAAVTS_					0	0	0			REV__ENST00000487020.5_1_7:24844026-24849479:-|nuORF	REV__ENST00000487020.5_1_7:24844026-24849479:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.752197265625	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.78058	1	7240	7240		30.504	0	1	423780	+		31552	27565	20841	20851	35982	35982					0.06383284011508294
LLPAAKTH	8	Unmodified	_LLPAAKTH_					0	0	0		ENST00000498611.5_1_22:50657979-50682900:-|nuORF;nc|ENSG00000128159|Q96RT7-2|TUBGCP6;nc|ENSG00000128159|Q96RT7-3|TUBGCP6;ENSG00000128159|ENST00000248846|TUBGCP6	ENST00000498611.5_1_22:50657979-50682900:-|nuORF	ENST00000498611.5_1_22:50657979-50682900:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.7748107910156	2	425.760895	849.507237	0.072613	3.0916E-05	-3.8671	-0.0016465	-3.7945	-0.0016156	425.7591116439099	39.315	0.49258	39.285	39.072	39.565	-0.03027					21	11	3	0	0	0	0.4196	1	2732	2732		44.531	30.756	1	87140			31553	3531	20842	20852	35983	35983					0.07646409968276657
LLPAARFLF	9	Unmodified	_LLPAARFLF_					0	0	0		ENST00000515711.1_1_1:156076496-156076607:+|nuORF	ENST00000515711.1_1_1:156076496-156076607:+|nuORF	ENST00000515711.1_1_1:156076496-156076607:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.3203735351562	2	524.32112	1046.62769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.416	1	54.366	53.866	54.866	-0.049271								0	0	0	0.31088	1	4503	4503		26.796	5.0938	1				31554	13089	20843	20853	35984	35984					0.10623817961868554
LLPAGTYKVV	10	Unmodified	_LLPAGTYKVV_					0	0	0		ENSG00000142330|ENST00000391984|CAPN10;nc|ENSG00000142330|Q9HC96-3|CAPN10;nc|ENSG00000142330|Q9HC96-8|CAPN10	ENSG00000142330|ENST00000391984|CAPN10	ENSG00000142330|ENST00000391984|CAPN10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8208618164062	2	530.823692	1059.63283	-0.07706	-4.0905E-05	-3.7072	-0.0019679	-3.7842	-0.0020088	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.85939	1	7623	7623		23.042	1.0826	1	1032800			31555	4559	20844	20854	35985	35985					0.10540077033851958
LLPALAPTPAP	11	Unmodified	_LLPALAPTPAP_					0	0	0		nc|ENSG00000277399|Q6PRD1|GPR179;ENSG00000277399|ENST00000616987|GPR179	nc|ENSG00000277399|Q6PRD1|GPR179	nc|ENSG00000277399|Q6PRD1|GPR179	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8206787109375	2	530.823692	1059.63283	-0.07706	-4.0905E-05	-3.7072	-0.0019679	-3.7842	-0.0020088	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.72228	1	7649	7649		27.882	0	1	1032800			31556	9019	20845	20855	35986	35986					0.1054007703382922
LLPALAPTPAP	11	Unmodified	_LLPALAPTPAP_					0	0	0		nc|ENSG00000277399|Q6PRD1|GPR179;ENSG00000277399|ENST00000616987|GPR179	nc|ENSG00000277399|Q6PRD1|GPR179	nc|ENSG00000277399|Q6PRD1|GPR179	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8217163085938	2	530.823692	1059.63283	-1.2397	-0.00065807	-4.086	-0.002169	-5.3257	-0.002827	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.67493	1	7556	7556		35.618	7.736	1	869100			31557	9019	20845	20855	35987	35987					0.1054007703382922
LLPAPRAPGR	10	Unmodified	_LLPAPRAPGR_					0	0	0		ENST00000274203.13_1_5:16936005-16936380:-|nuORF	ENST00000274203.13_1_5:16936005-16936380:-|nuORF	ENST00000274203.13_1_5:16936005-16936380:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.32373046875	2	524.324725	1046.6349	-0.50954	-0.00026717	-2.1471	-0.0011258	-2.6566	-0.0013929	524.3231468149792	30.369	0.88536	30.397	29.92	30.805	0.028618					49	19	3	0	0	0	0.86718	1	1960	1960		27.882	1.1893	1	319940			31558	9585	20846	20856	35988	35988					0.11344550562307631
LLPAWRQL	8	Unmodified	_LLPAWRQL_					0	0	0			REV__ENST00000475361.1_1_X:133941455-133941503:+|nuORF	REV__ENST00000475361.1_1_X:133941455-133941503:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8032531738281	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.86791	1	4567	4567		28.254	0	1	2702800	+		31559	27318	20847	20857	35989	35989					0.09366360785031702
LLPAWRQL	8	Unmodified	_LLPAWRQL_					0	0	0			REV__ENST00000475361.1_1_X:133941455-133941503:+|nuORF	REV__ENST00000475361.1_1_X:133941455-133941503:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.80364990234375	2	498.803094	995.591636	-0.60409	-0.00030132	1.8273	0.00091145	1.2232	0.00061013	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.82464	1	4121	4121		21.702	0	1	2424700	+		31560	27318	20847	20857	35990	35990					0.09366360785031702
LLPCSLPATG	10	Unmodified	_LLPCSLPATG_					0	0	0			REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	REV__ENST00000251473.9_1_19:11476091-11476349:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.2670593261719	2	486.265153	970.515753	0.66104	0.00032144	3.4294	0.0016676	4.0905	0.0019891	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.8608	1	8571	8571		34.173	1.3601	1	1702800	+		31561	24288	20848	20858	35991	35991					0.029315958225879513
LLPELLEGV	9	Unmodified	_LLPELLEGV_					0	0	0		ENSG00000143669|ENST00000389793|LYST;nc|ENSG00000143669|Q99698-2|LYST;ENST00000489585.5_1_1:235926109-235996891:-|nuORF;nc|ENSG00000143669|Q99698-3|LYST;ENST00000465349.5_1_1:235954948-235996891:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7962646484375	2	491.794601	981.574648	-0.71044	-0.00034939	3.0101	0.0014803	2.2996	0.001131	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.7932	1	4197	4197		19.36	1.0356	1	571510			31562	4656	20849	20859	35992	35992					0.08312395388566074
LLPELLSA	8	Unmodified	_LLPELLSA_					0	0	0		ENSG00000221829|ENST00000378643|FANCG;ENST00000461149.1_1_9:35078119-35078602:-|nuORF	ENSG00000221829|ENST00000378643|FANCG	ENSG00000221829|ENST00000378643|FANCG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2613525390625	2	428.262936	854.51132	-1.1356	-0.00048635	-1.7013	-0.00072859	-2.8369	-0.0012149	428.2621524287907	91.088	2.5476	91.088	90.477	93.025	0					222	59	5	0	0	0	0.884	1	8834	8834		33.516	6.7195	1	33233000			31563	8670	20850	20860	35993	35993					0.07824454671322201
LLPERYIK	8	Unmodified	_LLPERYIK_					0	0	0		ENSG00000080618|ENST00000181383|CPB2	ENSG00000080618|ENST00000181383|CPB2	ENSG00000080618|ENST00000181383|CPB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3142700195312	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.84341	1	12274	12274		24.203	0.68005	1	4038100			31564	1449	20851	20861	35994	35994					0.10343210236624145
LLPFLYGII	9	Unmodified	_LLPFLYGII_					0	0	0			REV__ENSG00000183671|ENST00000621141|CMKLR2	REV__ENSG00000183671|ENST00000621141|CMKLR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.82666015625	2	524.825704	1047.63685	-0.12962	-6.8027E-05	3.3503	0.0017583	3.2207	0.0016903	524.8273126123019	102.03	1.1787	102.23	101.8	102.98	0.19483					72	28	3	0	0	0	0.78292	1	10761	10761		29.842	4.3914	1	693200	+		31565	22620	20852	20862	35995	35995					0.1149416652756372
LLPFLYGII	9	Unmodified	_LLPFLYGII_					0	0	0			REV__ENSG00000183671|ENST00000621141|CMKLR2	REV__ENSG00000183671|ENST00000621141|CMKLR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.827392578125	2	524.825704	1047.63685	0.8139	0.00042716	1.4579	0.00076513	2.2718	0.0011923	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.7932	1	10510	10510		21.702	0	1	27719000	+		31566	22620	20852	20862	35996	35996					0.1149416652756372
LLPFRIRH	8	Unmodified	_LLPFRIRH_					0	0	0		nc|ENSG00000055118|Q12809-6|KCNH2;ENST00000461280.1_1_7:150646989-150652738:-|nuORF;ENST00000473610.5_1_7:150646989-150648224:-|nuORF;nc|ENSG00000055118|Q12809-5|KCNH2	nc|ENSG00000055118|Q12809-6|KCNH2;nc|ENSG00000055118|Q12809-5|KCNH2	nc|ENSG00000055118|Q12809-6|KCNH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.808837890625	2	526.329811	1050.64507	-1.5293	-0.00080489	3.2243	0.0016971	1.6951	0.00089217	526.3318162518564	98.945	2.6814	99.131	98.101	100.78	0.18582					148	61	4	0	0	0	0.4196	1	10186	10186		26.796	0	1	775870			31567	12020;14758	20853	20863	35997	35997					0.1217715828756809
LLPFTRVTA	9	Unmodified	_LLPFTRVTA_					0	0	0			REV__nc|ENSG00000056586|Q9HBD1-6|RC3H2	REV__nc|ENSG00000056586|Q9HBD1-6|RC3H2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.3058166503906	2	509.30821	1016.60187	-1.5847	-0.00080708	-3.0566	-0.0015567	-4.6412	-0.0023638	509.30651405671495	92.924	1.4274	93.116	92.648	94.076	0.19238					107	33	5	0	0	0	0.76764	1	9365	9365		34.173	3.6689	1	2014700	+		31568	16421	20854	20864	35998	35998					0.09422923719603205
LLPGAGPIL	9	Unmodified	_LLPGAGPIL_					0	0	0		nc|ENSG00000272395|K9M1U5-2|IFNL4;nc|ENSG00000272395|K9M1U5|IFNL4	nc|ENSG00000272395|K9M1U5-2|IFNL4	nc|ENSG00000272395|K9M1U5-2|IFNL4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.774658203125	2	425.773471	849.53239	0.17703	7.5374E-05	3.2935	0.0014023	3.4705	0.0014777	425.7747914132181	38.924	1.3455	39.012	38.418	39.764	0.088371					149	38	5	0	0	0	0.7932	1	2303	2303		21.702	0	1	14185000			31569	15311	20855	20865	35999	35999					0.10160464770854105
LLPGGAGG	8	Unmodified	_LLPGGAGG_					0	0	0		ENST00000435439.5_1_22:46505617-46505887:+|nuORF;ENST00000360737.4_1_22:46493806-46505887:+|nuORF	ENST00000435439.5_1_22:46505617-46505887:+|nuORF	ENST00000435439.5_1_22:46505617-46505887:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8822021484375	1	641.361702	640.354425	1.6477	0.0010568	-3.9396	-0.0025267	-2.2919	-0.0014699	641.3605158712303	98.858	1.0766	98.907	98.144	99.22	0.048164					30	24	2	0	0	0	0.4196	1	10482	10482		5.0869	0	1	102660			31570	10454	20856	20866	36000	36000					0.019862145716615487
LLPGLETV	8	Unmodified	_LLPGLETV_					0	0	0		nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	nc|ENSG00000080345|Q5UIP0-2|RIF1	nc|ENSG00000080345|Q5UIP0-2|RIF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.1998596191406	2	421.255111	840.49567	-0.02482	-1.0455E-05	-2.3943	-0.0010086	-2.4191	-0.0010191	421.2539598499834	84.068	1.2223	84.503	84.003	85.225	0.43537					64	29	3	0	0	0	0.4196	1	9807	9807		19.36	0	1	465390			31571	1439	20857	20867	36001	36001					0.06904168154289891
LLPGLPELRPF	11	Unmodified	_LLPGLPELRPF_					0	0	0		ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENST00000462494.5_1_7:5568599-5569288:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.9222717285156	3	417.920174	1250.73869	2.7179	0.0011359	2.3496	0.00098195	5.0675	0.0021178	417.9211507262476	105.91	2.7799	105.88	105.06	107.84	-0.03714					241	65	4	0	0	0	0.75041	1	11615	11615		14.086	0.57807	1	23169000			31572	12043	20858	20868	36002	36002					0.123354128793153
LLPGLPELRPF	11	Unmodified	_LLPGLPELRPF_					0	0	0		ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENST00000462494.5_1_7:5568599-5569288:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.9224853515625	3	417.920174	1250.73869	3.1807	0.0013293	1.9124	0.00079924	5.0931	0.0021285	417.9209605426618	105.73	2.7025	105.77	104.99	107.7	0.038322					262	63	6	0	0	0	0.7711	1	11739	11739		15.333	5.687	1	23553000			31573	12043	20858	20868	36003	36003					0.123354128793153
LLPGRAWIG	9	Unmodified	_LLPGRAWIG_					0	0	0			REV__ENST00000484546.1_1_9:123151516-123165527:-|nuORF	REV__ENST00000484546.1_1_9:123151516-123165527:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958984375	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.7932	1	4793	4793		25.45	1.2474	1	703950	+		31574	27513	20859	20869	36004	36004					0.08446074267988024
LLPGWPLKH	9	Unmodified	_LLPGWPLKH_					0	0	0			REV__ENSG00000215910|ENST00000688073|C1orf167	REV__ENSG00000215910|ENST00000688073|C1orf167	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.820556640625	2	530.818744	1059.62294	0.86442	0.00045885	3.1981	0.0016976	4.0626	0.0021565	530.8204450676391	80.434	1.3535	80.374	79.998	81.352	-0.059692					100	39	4	0	0	0	0.76996	1	8078	8078		33.516	7.9415	1	626610	+		31575	23694	20860	20870	36005	36005					0.09550933819105012
LLPHLGIPAT	10	Unmodified	_LLPHLGIPAT_					0	0	0		ENST00000247020.8_1_17:26975873-26975987:-|nuORF	ENST00000247020.8_1_17:26975873-26975987:-|nuORF	ENST00000247020.8_1_17:26975873-26975987:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3133544921875	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86201	1	12357	12357		24.203	1.1603	1	4038100			31576	9275	20861	20871	36006	36006					0.10343210236646883
LLPHTPLS	8	Unmodified	_LLPHTPLS_					0	0	0		ENST00000566581.5_1_15:34656183-34657316:-|nuORF	ENST00000566581.5_1_15:34656183-34657316:-|nuORF	ENST00000566581.5_1_15:34656183-34657316:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.25811767578125	2	439.260728	876.506903	2.7297	0.001199	3.6595	0.0016075	6.3892	0.0028065	439.26221620524564	112.19	0.57758	112.17	112.07	112.65	-0.025414					22	12	2	0	0	0	0.89457	1	12395	12395		37.028	0	1	549150			31577	13936	20862	20872	36007	36007					0.06370990248422004
LLPIFTEI	8	Unmodified	_LLPIFTEI_					0	0	0			REV__ENST00000543879.6_1_15:35166876-35196659:-|nuORF	REV__ENST00000543879.6_1_15:35166876-35196659:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.82183837890625	2	473.286411	944.55827	-1.0372	-0.00049088	-2.1973	-0.00104	-3.2345	-0.0015309	473.28529866593993	38.104	0.52615	38.053	37.717	38.243	-0.050369					15	11	2	0	0	0	0.4196	1	2612	2612		23.037	0	1	52898	+		31578	16242	20863	20873	36008	36008					0.08377314222445875
LLPILEGT	8	Unmodified	_LLPILEGT_					0	0	0			REV__ENST00000463410.1_1_10:75566827-75567228:-|nuORF	REV__ENST00000463410.1_1_10:75566827-75567228:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.261474609375	2	428.262936	854.51132	-0.17868	-7.6523E-05	-2.7106	-0.0011609	-2.8893	-0.0012374	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.86288	1	9283	9283		26.796	0	1	52688000	+		31579	27072	20864	20874	36009	36009					0.0782445467133357
LLPILEGT	8	Unmodified	_LLPILEGT_					0	0	0			REV__ENST00000463410.1_1_10:75566827-75567228:-|nuORF	REV__ENST00000463410.1_1_10:75566827-75567228:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2613220214844	2	428.262936	854.51132	-1.6655	-0.00071328	-1.2622	-0.00054056	-2.9277	-0.0012538	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.86791	1	9148	9148		28.254	2.8041	1	44776000	+		31580	27072	20864	20874	36010	36010					0.0782445467133357
LLPILFLLY	9	Unmodified	_LLPILFLLY_					0	0	0		ENSG00000176231|ENST00000322107|OR10H4	ENSG00000176231|ENST00000322107|OR10H4	ENSG00000176231|ENST00000322107|OR10H4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7810668945312	2	552.857004	1103.69945	-0.68561	-0.00037905	-3.1901	-0.0017636	-3.8757	-0.0021427	552.8548774484703	60.084	0.61252	60.637	60.279	60.891	0.55323					33	16	3	0	0	0	0.20789	1	6392	6392		49.211	0	1	695500			31581	7066	20865	20875	36011	36011					0.1517531259576117
LLPIRHSF	8	Unmodified	_LLPIRHSF_					0	0	0			REV__ENSG00000166828|ENST00000300061|SCNN1G	REV__ENSG00000166828|ENST00000300061|SCNN1G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79571533203125	2	491.795269	981.575986	-0.91317	-0.00044909	1.7019	0.00083701	0.78877	0.00038791	491.79595933805444	45.694	2.2667	46.589	46.327	48.594	0.89542					151	55	4	0	0	0	0.86791	1	4269	4269		28.254	5.2118	1	3110500	+		31582	21327	20866	20876	36012	36012					0.08446074267988024
LLPIVFPL	8	Unmodified	_LLPIVFPL_					0	0	0		ENST00000434116.6_1_15:65916409-65944223:+|nuORF;nc|ENSG00000074621|O60721-3|SLC24A1;nc|ENSG00000074621|O60721-2|SLC24A1;ENSG00000074621|ENST00000261892|SLC24A1	ENST00000434116.6_1_15:65916409-65944223:+|nuORF	ENST00000434116.6_1_15:65916409-65944223:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30084228515625	2	456.301865	910.589176	0.18552	8.4654E-05	-1.5705	-0.0007166	-1.3849	-0.00063195	456.3010022539405	33.29	1.7406	33.257	32.935	34.675	-0.032681					212	75	4	0	0	0	0.80127	1	1641	1641		16.705	0	1	1700700			31583	1310	20867	20877	36013	36013					0.1303051232736152
LLPKAARWA	9	Unmodified	_LLPKAARWA_					0	0	0			REV__ENSG00000198691|ENST00000370225|ABCA4	REV__ENSG00000198691|ENST00000370225|ABCA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3173217773438	2	513.316369	1024.61818	-0.38471	-0.00019748	1.1486	0.00058958	0.76386	0.0003921	513.3169360200682	55.22	1.0911	55.284	54.878	55.969	0.063721					55	37	2	0	0	0	0.78058	1	4644	4644		30.504	2.6214	1	243480	+		31584	23357	20868	20878	36014	36014					0.10686049676360199
LLPKIETL	8	Unmodified	_LLPKIETL_					0	0	0			REV__ENST00000373773.7_1_20:35312857-35350138:-|nuORF	REV__ENST00000373773.7_1_20:35312857-35350138:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8002624511719	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.80706	1	3204	3204		19.36	1.0356	1	890090	+		31585	17241	20869	20879	36015	36015					0.11905003113804469
LLPKKEESR	9	Unmodified	_LLPKKEESR_					0	0	0			REV__ENSG00000186472|ENST00000333891|PCLO	REV__ENSG00000186472|ENST00000333891|PCLO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.3272705078125	2	550.327131	1098.63971	0.84562	0.00046537	-0.71285	-0.0003923	0.13278	7.307E-05	550.3267482489723	100.06	1.2234	100.21	99.636	100.86	0.15073					67	27	3	0	0	0	0.77244	1	10438	10438		32.812	0	1	401350	+		31586	22856	20870	20880	36016	36016					0.09433389914420331
LLPKLSCGVK	10	Unmodified	_LLPKLSCGVK_					0	0	0		ENSG00000205403|ENST00000394634|CFI	ENSG00000205403|ENST00000394634|CFI	ENSG00000205403|ENST00000394634|CFI	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.3274536132812	2	529.325545	1056.63654	-0.019923	-1.0546E-05	2.8315	0.0014988	2.8115	0.0014882	529.3279494035099	44.311	1.0992	44.761	44.442	45.542	0.45025					34	26	2	0	0	0	0.37624	1	4059	4059		20.947	14.634	1	518820			31587	8528	20871	20881	36017	36017					0.11048423536067276
LLPKPKVALVK	11	Unmodified	_LLPKPKVALVK_					0	0	0		nc|ENSG00000166454|O43313-2|ATMIN;ENSG00000166454|ENST00000299575|ATMIN	nc|ENSG00000166454|O43313-2|ATMIN	nc|ENSG00000166454|O43313-2|ATMIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	603.419677734375	2	603.420834	1204.82712	-0.17205	-0.00010382	-2.6886	-0.0016223	-2.8606	-0.0017262	603.4191868743197	108.95	0.53123	108.98	108.69	109.22	0.034355					45	25	2	0	0	0	0.80784	1	11946	11946		9.7057	0	1	3070200			31588	6199	20872	20882	36018	36018					0.23289453189772757
LLPKTSPVC	9	Unmodified	_LLPKTSPVC_					0	0	0		ENST00000312655.8_1_17:57430604-57430868:+|nuORF	ENST00000312655.8_1_17:57430604-57430868:+|nuORF	ENST00000312655.8_1_17:57430604-57430868:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2779235839844	2	479.275521	956.536489	0.63867	0.0003061	3.2635	0.0015641	3.9021	0.0018702	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.7932	1	8434	8434		25.45	1.2474	1	6593200			31589	9942	20873	20883	36019	36019					0.05648186202256511
LLPLAPVE	8	Unmodified	_LLPLAPVE_					0	0	0			REV__ENST00000437374.5_1_10:1068715-1089667:+|nuORF	REV__ENST00000437374.5_1_10:1068715-1089667:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	425.7748718261719	2	426.265479	850.516405	-1.3707	-0.00058429	3.7385	0.0015936	2.3678	0.0010093	426.2678596953739	40.158	0.93031	40.114	39.45	40.381	-0.043694					36	21	3	0	0	0	0.4196	1	2852	2852		8.8223	0	1	42917	+		31590	26586	20874	20884	36020	36020					0.08516758533949087
LLPLAPVE	8	Unmodified	_LLPLAPVE_					0	0	0			REV__ENST00000437374.5_1_10:1068715-1089667:+|nuORF	REV__ENST00000437374.5_1_10:1068715-1089667:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	426.265479	850.516405	0.12487	5.3226E-05	2.816	0.0012004	2.9408	0.0012536	426.26685348470045	40.239	0.64645	40.208	39.729	40.375	-0.030987	0.028811	-0.0011028	NaN	8.8223	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42875	+		31591	26586	20874	20884							0.08516758533949087
LLPLAPVE	8	Unmodified	_LLPLAPVE_					0	0	0			REV__ENST00000437374.5_1_10:1068715-1089667:+|nuORF	REV__ENST00000437374.5_1_10:1068715-1089667:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	426.265479	850.516405	0.55374	0.00023604	4.9203	0.0020974	5.4741	0.0023334	426.267002093624	40.011	0.51043	40.021	39.687	40.197	0.0092812	-0.15864	0.00069126	NaN	8.8223	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62352	+		31592	26586	20874	20884							0.08516758533949087
LLPLAPVE	8	Unmodified	_LLPLAPVE_					0	0	0			REV__ENST00000437374.5_1_10:1068715-1089667:+|nuORF	REV__ENST00000437374.5_1_10:1068715-1089667:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	426.265479	850.516405	-1.7904	-0.00076319	5.7861	0.0024664	3.9957	0.0017032	426.26769184508055	40.156	0.71523	40.162	39.675	40.39	0.0065002	-0.017364	0.0014294	NaN	8.8223	26	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63700	+		31593	26586	20874	20884							0.08516758533949087
LLPLAPVE	8	Unmodified	_LLPLAPVE_					0	0	0			REV__ENST00000437374.5_1_10:1068715-1089667:+|nuORF	REV__ENST00000437374.5_1_10:1068715-1089667:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	426.265479	850.516405	0.18863	8.0408E-05	0.9766	0.00041629	1.1652	0.0004967	426.2656656143171	40.31	0.095871	40.392	40.305	40.401	0.081345	0.21217	-0.0026709	NaN	8.8223	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41983	+		31594	26586	20874	20884							0.08516758533949087
LLPLDPSA	8	Unmodified	_LLPLDPSA_					0	0	0			REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.23785400390625	2	413.239461	824.46437	-1.33	-0.0005496	-1.1028	-0.00045573	-2.4328	-0.0010053	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.86791	2	7008	6998;7008		37.028	0	1	895630	+		31595	18180	20875	20885	36021;36022	36022					0.045115951201864846
LLPLFLKAW	9	Unmodified	_LLPLFLKAW_					0	0	0		nc|ENSG00000128815|Q6ZS81-5|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-2|WDFY4;nc|ENSG00000128815|Q6ZS81-3|WDFY4	nc|ENSG00000128815|Q6ZS81-5|WDFY4;nc|ENSG00000128815|Q6ZS81-3|WDFY4	nc|ENSG00000128815|Q6ZS81-5|WDFY4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.8203735351562	2	550.846971	1099.67939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.604	1	19.675	19.175	20.175	0.071127								0	0	0	0.32894	1	416	416		20.482	1.1219	1				31596	3561;14900	20876	20886	36023	36023					0.13353561655776502
LLPLFPLHTSD	11	Unmodified	_LLPLFPLHTSD_					0	0	0		ENST00000486734.5_1_2:220072724-220073377:+|nuORF	ENST00000486734.5_1_2:220072724-220073377:+|nuORF	ENST00000486734.5_1_2:220072724-220073377:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3793334960938	2	626.850438	1251.68632	0.95209	0.00059682	3.3359	0.0020911	4.2879	0.0026879	626.8526674206375	105.53	0.41623	105.57	105.25	105.67	0.038322					11	9	2	0	0	0	0.17368	1	11483	11483		25.574	2.5316	1	57133			31597	12584	20877	20887	36024	36024					0.07054829745698044
LLPLGALTKE	10	Unmodified	_LLPLGALTKE_					0	0	0			REV__ENSG00000158417|ENST00000289371|EIF5B	REV__ENSG00000158417|ENST00000289371|EIF5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.3275756835938	2	527.828975	1053.6434	0.41895	0.00022113	-3.8693	-0.0020423	-3.4503	-0.0018212	528.3277425301544	55.037	1.035	55.129	54.778	55.813	0.091167					38	29	2	0	0	0	0.86763	1	4618	4618		26.693	2.4902	1	275760	+		31598	20604	20878	20888	36025	36025					0.11872059688266745
LLPLGILVLE	10	Unmodified	_LLPLGILVLE_					0	0	0		ENST00000427848.1_3_9:131517819-131534652:-|nuORF;ENST00000291900.6_1_9:131517819-131533932:-|nuORF	ENST00000427848.1_3_9:131517819-131534652:-|nuORF	ENST00000427848.1_3_9:131517819-131534652:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3587646484375	2	540.357368	1078.70018	-0.87065	-0.00047046	3.4074	0.0018412	2.5367	0.0013707	540.3590107608643	36.885	1.6	36.896	36.391	37.991	0.011173					96	35	4	0	0	0	0.81018	1	2419	2419		38.806	8.3025	1	594400			31599	9685	20879	20889	36026	36026					0.16398107244799576
LLPLGTVTL	9	Unmodified	_LLPLGTVTL_					0	0	0		ENSG00000145248|ENST00000273861|SLC10A4	ENSG00000145248|ENST00000273861|SLC10A4	ENSG00000145248|ENST00000273861|SLC10A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.80035400390625	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.7932	1	3252	3252		25.45	1.2474	1	210360			31600	4760	20880	20890	36027	36027					0.11905003113804469
LLPLHHTI	8	Unmodified	_LLPLHHTI_					0	0	0			REV__ENSG00000229474|ENST00000682850|PATL2	REV__ENSG00000229474|ENST00000682850|PATL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2863464355469	2	472.28982	942.565087	-0.020844	-9.8445E-06	-3.031	-0.0014315	-3.0519	-0.0014414	472.2886401095811	102.22	1.1993	102.27	101.63	102.83	0.043198					45	28	2	0	0	0	0.86288	1	11044	11044		26.796	2.2921	1	302630	+		31601	23752	20881	20891	36028	36028					0.09150671893701201
LLPLLLEES	9	Unmodified	_LLPLLLEES_					0	0	0			REV__nc|ENSG00000103932|Q9BWH6-2|RPAP1	REV__nc|ENSG00000103932|Q9BWH6-2|RPAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8088989257812	2	513.807708	1025.60086	0.37872	0.00019459	2.0528	0.0010547	2.4315	0.0012493	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.7932	1	4220	4220		18.324	0.95945	1	971720	+		31602	17429	20882	20892	36029	36029					0.08908664560044599
LLPLLLLLPSP	11	Unmodified	_LLPLLLLLPSP_					0	0	0			REV__ENSG00000099999|ENST00000382363|RNF215	REV__ENSG00000099999|ENST00000382363|RNF215	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	594.9039306640625	2	594.901943	1187.78933	3.3319	0.0019821	2.8875	0.0017178	6.2194	0.0036999	594.9034872366265	108.87	0.57749	108.84	108.61	109.19	-0.029381					46	23	3	0	0	0	0.77937	1	12094	12094		15.642	5.3766	1	1558200	+		31603	17124	20883	20893	36030	36030					0.20294942204327526
LLPLLPPAGRP	11	Unmodified	_LLPLLPPAGRP_					0	0	0		ENST00000415496.5_1_16:4738687-4738906:+|nuORF	ENST00000415496.5_1_16:4738687-4738906:+|nuORF	ENST00000415496.5_1_16:4738687-4738906:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.687744140625	2	572.366059	1142.71756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.998	1	71.131	70.631	71.631	0.13356								0	0	0	0.56276	1	6447	6447		21.96	2.8564	1				31604	11378	20884	20894	36031	36031					0.15191447570464334
LLPLLRSRTAR	11	Unmodified	_LLPLLRSRTAR_					0	0	0		ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59771728515625	3	432.613856	1294.81974	0.73448	0.00031775	1.931	0.00083537	2.6655	0.0011531	432.6147159567352	106.26	0.29794	106.36	106.27	106.56	0.099007					10	6	2	0	0	0	0.17472	1	11374	11374		8.0344	0	1	39457			31605	6034	20885	20895	36032	36032					0.1841211364207993
LLPLNTGITKF	11	Unmodified	_LLPLNTGITKF_					0	0	0			REV__ENST00000536683.5_1_11:94965259-94965783:+|nuORF	REV__ENST00000536683.5_1_11:94965259-94965783:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24749755859375	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.395	1	15.312	14.812	15.812	-0.083363								0	0	0	0.56276	1	35	35		27.644	5.0823	1		+		31606	28412	20886	20896	36033	36033					0.12347706642390222
LLPLPDHKV	9	Unmodified	_LLPLPDHKV_					0	0	0			REV__ENSG00000134504|ENST00000580059|KCTD1	REV__ENSG00000134504|ENST00000580059|KCTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.31396484375	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	2	12497	12497;12927		25.45	1.2474	1	4038100	+		31607	19147	20887	20897	36034;36035	36034					0.10343210236646883
LLPLPDQPPSA	11	Unmodified	_LLPLPDQPPSA_					0	0	0			REV__ENST00000479747.1_1_9:130678457-130678682:-|nuORF	REV__ENST00000479747.1_1_9:130678457-130678682:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.319580078125	2	574.321514	1146.62847	0.81881	0.00047026	-4.3328	-0.0024884	-3.514	-0.0020181	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.65746	1	9626	9626		37.812	1.3648	1	1866200	+		31608	27404	20888	20898	36036	36036					0.061025678202895506
LLPLPIVLHT	10	Unmodified	_LLPLPIVLHT_					0	0	0		ENSG00000081800|ENST00000194130|SLC13A1	ENSG00000081800|ENST00000194130|SLC13A1	ENSG00000081800|ENST00000194130|SLC13A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.9609985351562	2	558.362985	1114.71142	0.13834	7.7246E-05	0.89623	0.00050042	1.0346	0.00057767	558.8623708415615	17.53	0.18997	17.593	17.453	17.643	0.062603					10	9	2	0	0	0	0.37624	1	259	259		23.042	0	1	91215			31609	1469	20889	20899	36037	36037					0.15864929338931688
LLPLPLPCE	9	Unmodified	_LLPLPLPCE_					0	0	0			REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.78863525390625	2	497.785721	993.55689	0.6952	0.00034606	3.1521	0.0015691	3.8473	0.0019151	497.787148151759	23.215	0.7412	22.641	22.436	23.178	-0.57415					43	17	4	0	0	0	0.49378	1	1037	1037		52.299	9.8247	1	612690	+		31610	25455	20890	20900	36038	36038					0.05985356862061053
LLPLSHGRAR	10	Unmodified	_LLPLSHGRAR_					0	0	0			REV__ENST00000487852.1_1_13:33590814-33628082:+|nuORF	REV__ENST00000487852.1_1_13:33590814-33628082:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3392333984375	2	560.340907	1118.66726	-1.4185	-0.00079484	0.81526	0.00045682	-0.60324	-0.00033802	560.3413072333456	113.14	0.23969	113.11	113.01	113.25	-0.032333					11	6	3	0	0	0	0.86589	1	12081	12081		29.15	2.4566	1	2440300	+		31611	27580	20891	20901	36039	36039					0.11267337965296065
LLPLSLTLLL	10	Unmodified	_LLPLSLTLLL_					0	0	0		ENSG00000163521|ENST00000295759|GLB1L;nc|ENSG00000163521|Q6UWU2-2|GLB1L;ENST00000467548.1_1_2:220107868-220108295:-|nuORF	ENSG00000163521|ENST00000295759|GLB1L	ENSG00000163521|ENST00000295759|GLB1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.2827758789062	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.88945	1	2769	2769		10.866	3.1753	1	314410			31612	5815	20892	20902	36040	36040					0.18790680278880245
LLPLSPAP	8	Unmodified	_LLPLSPAP_					0	0	0			REV__ENST00000533482.5_1_5:131892713-131892965:+|nuORF	REV__ENST00000533482.5_1_5:131892713-131892965:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5892639160156	2	404.252372	806.49019	1.3326	0.0005387	1.8617	0.00075261	3.1943	0.0012913	404.2528928033913	41.727	0.49043	41.731	41.503	41.993	0.0034142					14	11	2	0	0	0	0.4196	1	3061	3061		14.664	0	1	47009	+		31613	28348	20893	20903	36041	36041					0.07920489362459193
LLPLSPAP	8	Unmodified	_LLPLSPAP_					0	0	0			REV__ENST00000533482.5_1_5:131892713-131892965:+|nuORF	REV__ENST00000533482.5_1_5:131892713-131892965:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	404.252372	806.49019	-1.8994	-0.00076782	5.7265	0.002315	3.8272	0.0015471	404.25480425222264	41.868	0.20467	41.872	41.744	41.948	0.0043983	0.070729	0.0016605	NaN	14.664	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36103	+		31614	28348	20893	20903							0.07920489362459193
LLPLTAWM	8	Unmodified	_LLPLTAWM_					0	0	0			REV__ENST00000534038.5_1_15:79224365-79237386:-|nuORF	REV__ENST00000534038.5_1_15:79224365-79237386:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7677001953125	2	472.767332	943.52011	-1.568	-0.00074129	1.3612	0.00064352	-0.20681	-9.7771E-05	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.89457	1	8009	8009		37.028	3.5355	1	404330	+		31615	28363	20894	20904	36042	36042					0.046091050361496855
LLPLVAGE	8	Unmodified	_LLPLVAGE_					0	0	0			REV__ENST00000325285.7_2_9:139837921-139838431:-|nuORF	REV__ENST00000325285.7_2_9:139837921-139838431:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2481994628906	2	406.249829	810.485105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.33	1	116.26	115.76	116.76	-0.069672								0	0	0	0.29498	1	12493	12493		26.796	0	1		+		31616	25059	20895	20905	36043	36043					0.07228185499843676
LLPLWGLM	8	Unmodified	_LLPLWGLM_					0	0	0			REV__ENST00000526525.1_1_11:126139211-126143019:+|nuORF	REV__ENST00000526525.1_1_11:126139211-126143019:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.77886962890625	2	471.777699	941.540846	-0.10976	-5.1782E-05	2.7093	0.0012782	2.5996	0.0012264	471.7788250865109	82.739	0.81616	82.805	82.396	83.212	0.065918					39	18	3	0	0	0	0.88393	1	8204	8204		33.493	1.5381	1	340970	+		31617	28210	20896	20906	36044	36044					0.06773695415824932
LLPNHVLQK	9	Unmodified	_LLPNHVLQK_					0	0	0		ENSG00000090060|ENST00000216277|PAPOLA;ENST00000554135.1_1_14:97014159-97018960:+|nuORF	ENSG00000090060|ENST00000216277|PAPOLA	ENSG00000090060|ENST00000216277|PAPOLA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8496704101562	2	531.326934	1060.63931	0.93767	0.00049821	-1.0184	-0.00054112	-0.080758	-4.2909E-05	531.3262020133044	36.526	0.62188	36.807	36.553	37.175	0.28173					29	14	3	0	0	0	0.20789	1	2883	2883		30.504	7.4612	1	193270			31618	1638	20897	20907	36045	36045					0.1114201498521652
LLPNIIRLPF	10	Unmodified	_LLPNIIRLPF_					0	0	0		ENST00000557056.5_1_14:24792442-24793534:-|nuORF;ENST00000310677.8_1_14:24791428-24793534:-|nuORF;ENST00000554577.5_1_14:24791773-24793534:-|nuORF;ENST00000554936.1_1_14:24791773-24792709:-|nuORF	ENST00000557056.5_1_14:24792442-24793534:-|nuORF	ENST00000557056.5_1_14:24792442-24793534:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	598.38037109375	2	598.381709	1194.74886	0.84734	0.00050703	-0.95155	-0.00056939	-0.10421	-6.236E-05	598.3810873389388	40.888	1.2283	40.892	40.311	41.539	0.0043983					77	44	2	0	0	0	0.85438	1	2624	2624		16.473	0.83134	1	407900			31619	9910	20898	20908	36046	36046					0.15928020604542326
LLPNPDAISI	10	Unmodified	_LLPNPDAISI_					0	0	0			REV__ENST00000531571.5_1_11:102960015-102962332:-|nuORF	REV__ENST00000531571.5_1_11:102960015-102962332:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8029174804688	2	526.802957	1051.59136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.24	1	112.27	111.77	112.77	0.030602								0	0	0	0.45132	1	13571	13571		30.504	3.8107	1		+		31620	28305	20899	20909	36047	36047					0.06762896274517516
LLPNRQTGKMA	11	Unmodified	_LLPNRQTGKMA_					0	0	0		ENSG00000177181|ENST00000431473|RIMKLA	ENSG00000177181|ENST00000431473|RIMKLA	ENSG00000177181|ENST00000431473|RIMKLA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	410.223388671875	3	410.232535	1227.67578	1.3266	0.0005442	2.1957	0.00090074	3.5222	0.0014449	410.5678707303601	24.854	0.3184	24.526	24.295	24.613	-0.32825					8	6	2	0	0	0	0.1729	1	1225	1225		23.378	4.1152	1	18277			31621	7122	20900	20910	36048	36048					0.07104523819634778
LLPNVKNGF	9	Unmodified	_LLPNVKNGF_					0	0	0			REV__nc|ENSG00000184465|A2RRH5-2|WDR27	REV__nc|ENSG00000184465|A2RRH5-2|WDR27	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.29046630859375	2	501.292559	1000.57057	-1.6108	-0.00080747	-2.0389	-0.0010221	-3.6496	-0.0018295	501.2913530153025	99.317	1.4862	99.503	99.074	100.56	0.18582					77	34	4	0	0	0	0.7932	1	10276	10276		25.45	1.9275	1	592170	+		31622	22681	20901	20911	36049	36049					0.07030350685522535
LLPNVTLLE	9	Unmodified	_LLPNVTLLE_					0	0	0		nc|ENSG00000103196|Q9H0B8-5|CRISPLD2;nc|ENSG00000103196|Q9H0B8-4|CRISPLD2;ENST00000565561.1_1_16:84853723-84872578:+|nuORF;ENST00000566431.5_1_16:84853723-84896622:+|nuORF;nc|ENSG00000103196|Q9H0B8-3|CRISPLD2;ENST00000569262.5_1_16:84853723-84906729:+|nuORF;nc|ENSG00000103196|Q9H0B8-2|CRISPLD2;ENSG00000103196|ENST00000262424|CRISPLD2	nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3073425292969	2	506.307875	1010.6012	-0.4302	-0.00021782	2.8218	0.0014287	2.3916	0.0012109	506.3092413243001	54.85	1.3019	54.801	54.615	55.917	-0.049271					56	42	2	0	0	0	0.77546	1	4625	4625		31.955	11.473	1	188390			31623	2061	20902	20912	36050	36050					0.09632084279905939
LLPPAPRQR	9	Unmodified	_LLPPAPRQR_					0	0	0			REV__ENST00000590555.5_1_17:74534445-74534577:+|nuORF	REV__ENST00000590555.5_1_17:74534445-74534577:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.3258056640625	2	524.324725	1046.6349	0.27206	0.00014265	-2.7651	-0.0014498	-2.493	-0.0013072	524.3228929656774	30.498	0.78591	30.502	30.054	30.84	0.0037212					44	17	3	0	0	0	0.76996	1	1995	1995		33.516	0.70317	1	378110	+		31624	29185	20903	20913	36051	36051					0.11344550562307631
LLPPKLLLRV	10	Unmodified	_LLPPKLLLRV_					0	0	0			REV__ENST00000489955.1_1_2:165551047-165551113:-|nuORF	REV__ENST00000489955.1_1_2:165551047-165551113:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	581.9080810546875	2	581.407727	1160.8009	-1.3499	-0.00078484	-2.0358	-0.0011836	-3.3857	-0.0019685	581.4064330770331	108.95	0.5045	108.97	108.69	109.19	0.020561					51	25	3	0	0	0	0.91289	1	11630	11630		7.1934	3.7833	1	1616400	+		31625	27628	20904	20914	36052	36052					0.22693184018294232
LLPPKLLLRV	10	Unmodified	_LLPPKLLLRV_					0	0	0			REV__ENST00000489955.1_1_2:165551047-165551113:-|nuORF	REV__ENST00000489955.1_1_2:165551047-165551113:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	581.9080810546875	2	581.407727	1160.8009	-1.3499	-0.00078484	-2.0358	-0.0011836	-3.3857	-0.0019685	581.4064330770331	108.95	0.5045	108.97	108.69	109.19	0.020561					51	25	3	0	0	0	0.37624	1	11630	11630		7.1934	3.7833	1	1616400	+		31626	27628	20904	20914	36053	36053					0.22693184018294232
LLPPLLVF	8	Unmodified	_LLPPLLVF_					0	0	0		ENST00000555883.5_1_14:21702257-21737553:-|nuORF	ENST00000555883.5_1_14:21702257-21737553:-|nuORF	ENST00000555883.5_1_14:21702257-21737553:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3018493652344	2	456.301865	910.589176	-1.9609	-0.00089476	0.42413	0.00019353	-1.5368	-0.00070123	456.3019244318546	33.431	1.5568	33.431	33.135	34.692	0					145	44	4	0	0	0	0.84567	2	1848	1837;1848		24.504	0	1	2313000			31627	13739	20905	20915	36054;36055	36055					0.13030512327384258
LLPPLLVF	8	Unmodified	_LLPPLLVF_					0	0	0		ENST00000555883.5_1_14:21702257-21737553:-|nuORF	ENST00000555883.5_1_14:21702257-21737553:-|nuORF	ENST00000555883.5_1_14:21702257-21737553:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30108642578125	2	456.301865	910.589176	-1.9367	-0.0008837	0.44582	0.00020343	-1.4908	-0.00068028	456.30190517421295	35.075	2.0362	35.075	34.654	36.69	0					139	52	4	0	0	0	0.80127	3	1970	1951;1970;2002		16.705	0	1	943370			31628	13739	20905	20915	36056;36057;36058	36057					0.13030512327384258
LLPPLLVF	8	Unmodified	_LLPPLLVF_					0	0	0		ENST00000555883.5_1_14:21702257-21737553:-|nuORF	ENST00000555883.5_1_14:21702257-21737553:-|nuORF	ENST00000555883.5_1_14:21702257-21737553:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30096435546875	2	456.301865	910.589176	0.82269	0.00037539	-2.2844	-0.0010424	-1.4617	-0.00066698	456.30067401982916	32.79	1.601	33.001	32.465	34.066	0.21168					118	37	4	0	0	0	0.84567	1	2285	2285		24.504	7.799	1	2892400			31629	13739	20905	20915	36059	36059					0.13030512327384258
LLPPLPLL	8	Unmodified	_LLPPLPLL_					0	0	0		ENST00000282096.8_1_11:14665308-14793517:+|nuORF	ENST00000282096.8_1_11:14665308-14793517:+|nuORF	ENST00000282096.8_1_11:14665308-14793517:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2636413574219	2	438.301865	874.589176	1.4962	0.0006558	-1.3304	-0.0005831	0.16585	7.2694E-05	438.3018566335529	34.902	0.38829	35.284	34.977	35.365	0.3812					17	9	3	0	0	0	0.4196	1	2629	2629		5.0869	0	1	222070			31630	9631	20906	20916	36060	36060					0.14686512327375567
LLPPPASI	8	Unmodified	_LLPPPASI_					0	0	0		ENST00000493686.1_1_2:75873933-75874346:+|nuORF;ENSG00000115364|ENST00000393909|MRPL19	ENST00000493686.1_1_2:75873933-75874346:+|nuORF	ENST00000493686.1_1_2:75873933-75874346:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.57476806640625	2	404.252372	806.49019	0.5764	0.00023301	-4.0173	-0.001624	-3.4409	-0.001391	404.25074711899276	83.21	0.3409	83.357	83.272	83.613	0.14694					10	7	2	0	0	0	0.4196	1	8082	8082		8.8223	0	1	25631			31631	2837	20907	20917	36061	36061					0.07920489362459193
LLPPPLLQTG	10	Unmodified	_LLPPPLLQTG_					0	0	0		ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8273315429688	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.8608	1	11089	11089		34.173	0	1	30867000			31632	4546	20908	20918	36062	36062					0.11092077033845271
LLPPPLSP	8	Unmodified	_LLPPPLSP_					0	0	0		ENST00000604367.1_1_3:46964817-46965171:-|nuORF;ENST00000488069.5_1_3:46964817-47018222:-|nuORF	ENST00000604367.1_1_3:46964817-46965171:-|nuORF	ENST00000604367.1_1_3:46964817-46965171:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.2586975097656	2	417.260197	832.50584	-2.1518	-0.00089787	-1.6828	-0.00070218	-3.8346	-0.0016	417.25934690137603	21.231	2.6146	21.231	20.572	23.187	0					203	120	3	0	0	0	0.87276	1	590	590		29.842	0	1	250530			31633	12616	20909	20919	36063	36063					0.08288775879520927
LLPPPLSP	8	Unmodified	_LLPPPLSP_					0	0	0		ENST00000604367.1_1_3:46964817-46965171:-|nuORF;ENST00000488069.5_1_3:46964817-47018222:-|nuORF	ENST00000604367.1_1_3:46964817-46965171:-|nuORF	ENST00000604367.1_1_3:46964817-46965171:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.25830078125	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.82464	1	545	545		21.702	0	1	817900			31634	12616	20909	20919	36064	36064					0.08288775879520927
LLPPPPSL	8	Unmodified	_LLPPPPSL_					0	0	0		ENST00000443339.5_1_3:9475802-9506425:+|nuORF;nc|ENSG00000168137|Q9C0A6-2|SETD5;nc|ENSG00000168137|Q9C0A6-3|SETD5;ENSG00000168137|ENST00000402198|SETD5;ENST00000466242.5_1_3:9484907-9517772:+|nuORF	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.258544921875	2	417.260197	832.50584	-2.1518	-0.00089787	-1.6828	-0.00070218	-3.8346	-0.0016	417.25934690137603	21.231	2.6146	21.231	20.572	23.187	0					203	120	3	0	0	0	0.81724	2	580	555;580		35.201	0	1	250530			31635	11803	20910	20920	36065;36066	36066					0.08288775879520927
LLPPYLRVIQ	10	Unmodified	_LLPPYLRVIQ_					0	0	0		ENST00000440465.1_1_10:36811746-36813066:-|nuORF;ENSG00000105835|ENST00000222553|NAMPT	ENST00000440465.1_1_10:36811746-36813066:-|nuORF	ENST00000440465.1_1_10:36811746-36813066:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5407409667969	3	404.588536	1210.74378	0.81856	0.00033118	2.2944	0.00092829	3.113	0.0012595	404.58880227838614	37.98	0.17911	37.991	37.857	38.036	0.011173					5	3	2	0	0	0	0.37624	1	2569	2569		15.333	0	1	9768.3			31636	2255	20911	20921	36067	36067					0.14683716741933495
LLPQLAAS	8	Unmodified	_LLPQLAAS_					0	0	0			REV__nc|ENSG00000144730|Q8NFM7-2|IL17RD	REV__nc|ENSG00000144730|Q8NFM7-2|IL17RD	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.75103759765625	2	406.747453	811.480354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.16	1	119.14	118.64	119.64	-0.024033								0	0	0	0.30045	1	13204	13204		40.573	1.7665	1		+		31637	19909	20912	20922	36068	36068					0.06707301357084816
LLPQPGVQ	8	Unmodified	_LLPQPGVQ_					0	0	0			REV__nc|ENSG00000176994|Q8TEV9-2|SMCR8	REV__nc|ENSG00000176994|Q8TEV9-2|SMCR8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.5862121582031	2	426.252903	850.491253	0.75303	0.00032098	-0.10006	-4.265E-05	0.65298	0.00027833	426.2527624280744	17.659	0.47475	17.176	16.944	17.419	-0.48256					17	10	2	0	0	0	0.4196	1	301	301		12.207	0	1	159580	+		31638	22170	20913	20923	36069	36069					0.06002703731383008
LLPQPVLA	8	Unmodified	_LLPQPVLA_					0	0	0		nc|ENSG00000085552|Q9P2J2-2|IGSF9;ENSG00000085552|ENST00000368094|IGSF9;ENST00000493195.5_1_1:159899139-159902434:-|nuORF;ENST00000496645.5_1_1:159897137-159899822:-|nuORF	nc|ENSG00000085552|Q9P2J2-2|IGSF9	nc|ENSG00000085552|Q9P2J2-2|IGSF9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7750549316406	2	425.773471	849.53239	0.52804	0.00022483	2.6288	0.0011193	3.1568	0.0013441	425.7745403369288	37.544	1.064	38.03	37.492	38.556	0.48581					97	26	5	0	0	0	0.87807	1	3093	3093		31.579	1.7373	1	42348000			31639	1533	20914	20924	36070	36070					0.10160464770842736
LLPQRAFRLV	10	Unmodified	_LLPQRAFRLV_					0	0	0			REV__nc|ENSG00000164488|Q5SW24-3|DACT2	REV__nc|ENSG00000164488|Q5SW24-3|DACT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.9232482910156	3	404.92403	1211.75026	0.44861	0.00018165	-3.2485	-0.0013154	-2.7999	-0.0011337	404.92260093832465	26.168	1.321	26.213	25.795	27.116	0.045507					105	39	4	0	0	0	0.86698	1	1131	1131		28.081	5.5018	1	304530	+		31640	21086	20915	20925	36071	36071					0.15285654693320794
LLPQRPRSLQ	10	Unmodified	_LLPQRPRSLQ_					0	0	0			REV__nc|ENSG00000143768|O00292-2|LEFTY2	REV__nc|ENSG00000143768|O00292-2|LEFTY2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.24676513671875	3	403.247173	1206.71969	2.718	0.001096	-3.4576	-0.0013942	-0.73958	-0.00029823	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.86763	1	11645	11645		25.126	6.5949	1	15597000	+		31641	19837	20916	20926	36072	36072					0.12459876308275852
LLPRAEKRRRR	11	Unmodified	_LLPRAEKRRRR_					0	0	0		ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.9749755859375	3	484.31117	1449.91168	-0.87841	-0.00042542	-3.8221	-0.0018511	-4.7005	-0.0022765	484.3094204134852	16.474	0.42381	16.521	16.266	16.69	0.047804					29	17	3	0	0	0	0.18131	1	158	158		8.7993	0	1	257860			31642	2151	20917	20927	36073	36073					0.20472216779103292
LLPRGRDS	8	Unmodified	_LLPRGRDS_					0	0	0		nc|ENSG00000168763|Q8NE01-3|CNNM3	nc|ENSG00000168763|Q8NE01-3|CNNM3	nc|ENSG00000168763|Q8NE01-3|CNNM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2630310058594	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.87922	1	8184	8184		31.955	0	1	4061400			31643	15082	20918	20928	36074	36074					0.05435722848858404
LLPRHLYT	8	Unmodified	_LLPRHLYT_					0	0	0			REV__nc|ENSG00000089505|Q8IZ96-12|CMTM1	REV__nc|ENSG00000089505|Q8IZ96-12|CMTM1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8001708984375	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.759	1	42.759	42.259	43.259	0								0	0	0	0.29755	1	2987	2987		24.203	1.1603	1		+		31644	29721	20919	20929	36075	36075					0.08122056922411502
LLPRHLYT	8	Unmodified	_LLPRHLYT_					0	0	0			REV__nc|ENSG00000089505|Q8IZ96-12|CMTM1	REV__nc|ENSG00000089505|Q8IZ96-12|CMTM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8023986816406	2	506.800552	1011.58655	-0.4991	-0.00025294	1.3209	0.00066945	0.82183	0.00041651	506.8011482581911	44.494	2.6105	44.503	42.78	45.391	0.0084534					109	64	3	0	0	0	0.92973	1	3225	3225		50.025	7.5501	1	373670	+		31645	29721	20919	20929	36076	36076					0.08122056922411502
LLPRHLYT	8	Unmodified	_LLPRHLYT_					0	0	0			REV__nc|ENSG00000089505|Q8IZ96-12|CMTM1	REV__nc|ENSG00000089505|Q8IZ96-12|CMTM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80108642578125	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.90465	1	3247	3247		40.573	13.777	1	412810	+		31646	29721	20919	20929	36077	36077					0.08122056922411502
LLPRHLYT	8	Unmodified	_LLPRHLYT_					0	0	0			REV__nc|ENSG00000089505|Q8IZ96-12|CMTM1	REV__nc|ENSG00000089505|Q8IZ96-12|CMTM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8021240234375	2	506.800552	1011.58655	-0.1225	-6.2083E-05	1.1991	0.00060769	1.0766	0.00054561	506.8011249172422	46.216	2.1586	46.137	45.418	47.576	-0.079006					85	63	2	0	0	0	0.86288	1	3394	3394		26.796	1.222	1	271040	+		31647	29721	20919	20929	36078	36078					0.08122056922411502
LLPRKLNTEPK	11	Unmodified	_LLPRKLNTEPK_					0	0	0		ENST00000553026.5_1_12:30881575-30884349:-|nuORF;ENST00000537553.5_1_12:30873726-30884436:-|nuORF;nc|ENSG00000110888|Q6IMN6-6|CAPRIN2;nc|ENSG00000110888|Q6IMN6-4|CAPRIN2;ENST00000454014.6_1_12:30862838-30884436:-|nuORF;ENST00000548676.5_1_12:30862838-30884436:-|nuORF;nc|ENSG00000110888|Q6IMN6-10|CAPRIN2;nc|ENSG00000110888|Q6IMN6-7|CAPRIN2;nc|ENSG00000110888|Q6IMN6-3|CAPRIN2;ENSG00000110888|ENST00000695402|CAPRIN2;nc|ENSG00000110888|Q6IMN6-2|CAPRIN2;nc|ENSG00000110888|Q6IMN6-9|CAPRIN2;nc|ENSG00000110888|Q6IMN6|CAPRIN2	ENST00000553026.5_1_12:30881575-30884349:-|nuORF	ENST00000553026.5_1_12:30881575-30884349:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2733154296875	3	436.938117	1307.79252	-0.34593	-0.00015115	4.1205	0.0018004	3.7746	0.0016493	436.9397797202756	46.5	1.3452	46.421	46.006	47.352	-0.079006					113	38	4	0	0	0	0.75121	1	3436	3436		21.78	0.74819	1	942420			31648	2549	20920	20930	36079	36079					0.15093585311024071
LLPRLRKQLA	10	Unmodified	_LLPRLRKQLA_					0	0	0		ENSG00000144712|ENST00000456430|CAND2;nc|ENSG00000144712|O75155-2|CAND2	ENSG00000144712|ENST00000456430|CAND2	ENSG00000144712|ENST00000456430|CAND2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.246826171875	3	403.27143	1206.79246	-1.7907	-0.00072214	3.3803	0.0013632	1.5896	0.00064105	403.27286809189775	104.37	0.3437	104.54	104.38	104.73	0.17096					12	8	2	0	0	0	0.37624	1	11065	11065		16.007	15.666	1	114060			31649	4727	20921	20931	36080	36080					0.19733630101700328
LLPRLSIECS	10	Unmodified	_LLPRLSIECS_					0	0	0			REV__ENSG00000117148|ENST00000375406|ACTL8	REV__ENSG00000117148|ENST00000375406|ACTL8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.27099609375	2	565.815541	1129.61653	0.56348	0.00031883	0.25538	0.0001445	0.81886	0.00046332	565.8152549913748	50.624	0.57358	51.071	50.724	51.297	0.4476					19	13	2	0	0	0	0.37624	1	4977	4977		29.15	8.2026	1	120650	+		31650	18248	20922	20932	36081	36081					0.05690627805438453
LLPRPGLRQAS	11	Unmodified	_LLPRPGLRQAS_					0	0	0		chr1:204192914-204196376|28|645.43|0.2|11.64|-|2|KISS1,KISS1|1	chr1:204192914-204196376|28|645.43|0.2|11.64|-|2|KISS1,KISS1|1	chr1:204192914-204196376|28|645.43|0.2|11.64|-|2|KISS1,KISS1|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.367919921875	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.89	1	117.86	117.36	118.36	-0.02433								0	0	0	0.56276	1	13056	13056		20.947	0	1				31651	37	20923	20933	36082	36082					0.12459876308275852
LLPRPGLRQAS	11	Unmodified	_LLPRPGLRQAS_					0	0	0		chr1:204192914-204196376|28|645.43|0.2|11.64|-|2|KISS1,KISS1|1	chr1:204192914-204196376|28|645.43|0.2|11.64|-|2|KISS1,KISS1|1	chr1:204192914-204196376|28|645.43|0.2|11.64|-|2|KISS1,KISS1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.36669921875	2	604.367121	1206.71969	0.90473	0.00054679	-2.0534	-0.001241	-1.1487	-0.00069423	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.7342	1	11365	11365		25.574	0	1	105740000			31652	37	20923	20933	36083	36083					0.12459876308275852
LLPRPGLRQAS	11	Unmodified	_LLPRPGLRQAS_					0	0	0		chr1:204192914-204196376|28|645.43|0.2|11.64|-|2|KISS1,KISS1|1	chr1:204192914-204196376|28|645.43|0.2|11.64|-|2|KISS1,KISS1|1	chr1:204192914-204196376|28|645.43|0.2|11.64|-|2|KISS1,KISS1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3657836914062	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.73893	3	12513	12513;12725;12852		24.519	4.5224	1	3346600			31653	37	20923	20933	36084;36085;36086	36084					0.12459876308275852
LLPRRGSTG	9	Unmodified	_LLPRRGSTG_					0	0	0			REV__nc|ENSG00000090006|Q8N2S1|LTBP4	REV__nc|ENSG00000090006|Q8N2S1|LTBP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.7856140136719	2	478.785433	955.556313	-0.98121	-0.00046979	2.8532	0.0013661	1.872	0.0008963	478.7857916206205	92.576	2.3382	92.576	91.633	93.971	0					123	53	4	0	0	0	0.7932	1	9100	9100		24.203	0	1	417180	+		31654	29723	20924	20934	36087	36087					0.07675698257241947
LLPRRRLLCR	10	Unmodified	_LLPRRRLLCR_					0	0	0		ENST00000473391.1_1_7:150067121-150067265:+|nuORF	ENST00000473391.1_1_7:150067121-150067265:+|nuORF	ENST00000473391.1_1_7:150067121-150067265:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.59771728515625	3	432.611681	1294.81321	-0.96165	-0.00041602	-3.4064	-0.0014736	-4.368	-0.0018897	432.6098623528363	106.64	0.35909	106.64	106.48	106.84	0					9	7	2	0	0	0	0.37624	1	11054	11054		4.0829	0	1	25106			31655	12279	20925	20935	36088	36088					0.17759897209703013
LLPSAKDPILP	11	Unmodified	_LLPSAKDPILP_					0	0	0			REV__ENSG00000067704|ENST00000366922|IARS2	REV__ENSG00000067704|ENST00000366922|IARS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3529663085938	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.72918	1	12943	12943		26.693	8.3685	1	3937500	+		31656	16547	20926	20936	36089	36089					0.12132017751082458
LLPSEKLL	8	Unmodified	_LLPSEKLL_					0	0	0			REV__ENST00000281543.5_1_4:44687997-44688555:+|nuORF	REV__ENST00000281543.5_1_4:44687997-44688555:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.791259765625	2	456.791861	911.569169	0.27011	0.00012339	2.3821	0.0010881	2.6523	0.0012115	456.79279371016634	46.303	1.4327	46.341	45.811	47.244	0.038181					69	39	2	0	0	0	0.89962	1	3369	3369		38.806	5.2906	1	172310	+		31657	24606	20927	20937	36090	36090					0.10984716596760791
LLPSHLPLHKP	11	Unmodified	_LLPSHLPLHKP_					0	0	0			REV__ENST00000344629.11_1_3:9798246-9798938:+|nuORF	REV__ENST00000344629.11_1_3:9798246-9798938:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.92254638671875	3	417.923919	1250.74993	-1.7716	-0.00074038	-2.0493	-0.00085646	-3.8209	-0.0015968	417.92308931399344	105.49	2.9586	105.65	104.79	107.75	0.15925					261	73	4	0	0	0	0.69995	3	11251	11203;11251;11422		41.08	15.017	1	33626000	+		31658	25302	20928	20938	36091;36092;36093	36092					0.1345823497345009
LLPSHLPLHKP	11	Unmodified	_LLPSHLPLHKP_					0	0	0			REV__ENST00000344629.11_1_3:9798246-9798938:+|nuORF	REV__ENST00000344629.11_1_3:9798246-9798938:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92254638671875	3	417.923919	1250.74993	-1.8945	-0.00079175	-2.0551	-0.00085887	-3.9496	-0.0016506	417.92301973502657	105.61	2.7753	105.68	104.89	107.66	0.073112					226	67	4	0	0	0	0.73893	1	11201	11201		21.78	0.094677	1	18308000	+		31659	25302	20928	20938	36094	36094					0.1345823497345009
LLPSIPLVV	9	Unmodified	_LLPSIPLVV_					0	0	0		ENST00000302538.9_1_17:909026-909185:-|nuORF	ENST00000302538.9_1_17:909026-909185:-|nuORF	ENST00000302538.9_1_17:909026-909185:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	475.23944091796875	2	475.817879	949.621205	-1.2751	-0.00060671	4.4272	0.0021065	3.1521	0.0014998	475.81941146097273	39.735	1.1768	39.691	39.204	40.38	-0.043697					36	27	2	0	0	0	0.20789	1	2966	2966		14.664	5.8418	1	54033			31660	9822	20929	20939	36095	36095					0.1443788001053008
LLPSIPLVV	9	Unmodified	_LLPSIPLVV_					0	0	0		ENST00000302538.9_1_17:909026-909185:-|nuORF	ENST00000302538.9_1_17:909026-909185:-|nuORF	ENST00000302538.9_1_17:909026-909185:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	475.817879	949.621205	0.19397	9.2294E-05	2.246	0.0010687	2.4399	0.001161	475.8185371771097	39.869	0.9272	39.838	39.48	40.408	-0.03027	0.15436	-0.0012819	NaN	8.8223	34	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68563			31661	9822	20929	20939							0.1443788001053008
LLPSIPLVV	9	Unmodified	_LLPSIPLVV_					0	0	0		ENST00000302538.9_1_17:909026-909185:-|nuORF	ENST00000302538.9_1_17:909026-909185:-|nuORF	ENST00000302538.9_1_17:909026-909185:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	475.817879	949.621205	-2.4225	-0.0011527	5.0777	0.0024161	2.6551	0.0012634	475.8198593665373	39.817	1.1476	39.827	39.343	40.49	0.0092773	0.14246	0.0014129	NaN	8.8223	34	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65939			31662	9822	20929	20939							0.1443788001053008
LLPSIPLVV	9	Unmodified	_LLPSIPLVV_					0	0	0		ENST00000302538.9_1_17:909026-909185:-|nuORF	ENST00000302538.9_1_17:909026-909185:-|nuORF	ENST00000302538.9_1_17:909026-909185:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	475.817879	949.621205	-0.9683	-0.00046074	3.8963	0.0018539	2.928	0.0013932	475.81927434519775	39.671	0.9763	39.677	39.337	40.313	0.0065041	-0.0069541	0.00028865	NaN	8.8223	30	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84078			31663	9822	20929	20939							0.1443788001053008
LLPSLAVY	8	Unmodified	_LLPSLAVY_					0	0	0		ENSG00000109016|ENST00000395511|DHRS7B;ENST00000164133.6_1_11:64701657-64701921:+|nuORF	ENSG00000109016|ENST00000395511|DHRS7B	ENSG00000109016|ENST00000395511|DHRS7B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77142333984375	2	438.265479	874.516405	0.18698	8.1948E-05	-4.1866	-0.0018348	-3.9996	-0.0017529	438.2638893087879	36.982	0.78362	37.263	36.931	37.714	0.28173					48	18	4	0	0	0	0.4196	1	2959	2959		26.796	17.974	1	1601500			31664	2444	20930	20940	36096	36096					0.07412758533951092
LLPSLAVY	8	Unmodified	_LLPSLAVY_					0	0	0		ENSG00000109016|ENST00000395511|DHRS7B;ENST00000164133.6_1_11:64701657-64701921:+|nuORF	ENSG00000109016|ENST00000395511|DHRS7B	ENSG00000109016|ENST00000395511|DHRS7B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7704162597656	2	438.265479	874.516405	-1.8167	-0.00079621	-2.2258	-0.00097548	-4.0425	-0.0017717	438.2641908819814	40.002	1.394	40.37	39.342	40.736	0.36797					77	33	3	0	0	0	0.4196	1	3403	3403		29.842	0	1	2912900			31665	2444	20930	20940	36097	36097					0.07412758533951092
LLPSLSPPD	9	Unmodified	_LLPSLSPPD_					0	0	0			REV__ENST00000531976.1_1_11:1490888-1491104:-|nuORF	REV__ENST00000531976.1_1_11:1490888-1491104:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.7619934082031	2	469.7633	937.512048	0.18565	8.7212E-05	-3.8401	-0.0018039	-3.6544	-0.0017167	469.76127734615494	35.397	1.4141	35.503	35.2	36.614	0.10604					71	45	2	0	0	0	0.76996	1	1970	1970		33.516	1.5607	1	151100	+		31666	28316	20931	20941	36098	36098					0.0407924932038668
LLPSQDLAN	9	Unmodified	_LLPSQDLAN_					0	0	0		ENST00000604367.1_1_3:46964817-46965171:-|nuORF;ENST00000488069.5_1_3:46964817-47018222:-|nuORF	ENST00000604367.1_1_3:46964817-46965171:-|nuORF	ENST00000604367.1_1_3:46964817-46965171:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.290771484375	2	485.763832	969.513111	0.12668	6.1535E-05	0.19005	9.232E-05	0.31673	0.00015386	485.7638482133264	53.298	0.61901	53.712	53.332	53.951	0.4139					25	14	2	0	0	0	0.20789	1	5359	5359		49.442	27.482	1	335100			31667	12616	20932	20942	36099	36099					0.027134636892810704
LLPSYQKLHKI	11	Unmodified	_LLPSYQKLHKI_					0	0	0			REV__ENSG00000082153|ENST00000409600|BZW1	REV__ENSG00000082153|ENST00000409600|BZW1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2733459472656	3	447.274729	1338.80236	-1.2893	-0.00057667	-3.0438	-0.0013614	-4.3331	-0.0019381	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.76579	1	11526	11526		18.531	0.69791	1	31263000	+		31668	16833	20933	20943	36100	36100					0.1465077331640714
LLPSYQKLHKI	11	Unmodified	_LLPSYQKLHKI_					0	0	0			REV__ENSG00000082153|ENST00000409600|BZW1	REV__ENSG00000082153|ENST00000409600|BZW1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	447.27374267578125	3	447.274729	1338.80236	-1.7854	-0.00079855	-2.3253	-0.0010401	-4.1107	-0.0018386	447.27362843006824	106.96	1.1721	107.02	106.47	107.64	0.053757					124	27	6	0	0	0	0.74405	1	11458	11458		23.378	3.3474	1	15545000	+		31669	16833	20933	20943	36101	36101					0.1465077331640714
LLPTHVAPLA	10	Unmodified	_LLPTHVAPLA_					0	0	0		ENST00000377991.8_1_9:35853199-35853710:+|nuORF	ENST00000377991.8_1_9:35853199-35853710:+|nuORF	ENST00000377991.8_1_9:35853199-35853710:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3131713867188	2	516.316035	1030.61752	-1.5618	-0.0008064	-1.828	-0.00094385	-3.3899	-0.0017503	516.315128223729	103.33	1.0546	103.45	103.07	104.12	0.11494					63	26	3	0	0	0	0.86305	1	10856	10856		31.955	8.9124	1	813320			31670	10850	20934	20944	36102	36102					0.10343210236646883
LLPTHVAPLA	10	Unmodified	_LLPTHVAPLA_					0	0	0		ENST00000377991.8_1_9:35853199-35853710:+|nuORF	ENST00000377991.8_1_9:35853199-35853710:+|nuORF	ENST00000377991.8_1_9:35853199-35853710:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3135986328125	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.777	1	12528	12528		40.573	17.53	1	4038100			31671	10850	20934	20944	36103	36103					0.10343210236646883
LLPTKKFW	8	Unmodified	_LLPTKKFW_					0	0	0		nc|ENSG00000055917|Q8TB72-2|PUM2;ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72|PUM2;ENST00000420234.5_1_2:20508312-20527121:-|nuORF	nc|ENSG00000055917|Q8TB72-2|PUM2	nc|ENSG00000055917|Q8TB72-2|PUM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.814208984375	2	516.81567	1031.61679	-0.50172	-0.0002593	-2.2059	-0.00114	-2.7076	-0.0013993	516.8143915922866	36.417	1.4407	36.361	35.651	37.092	-0.055649					60	31	3	0	0	0	0.89043	1	2414	2414		35.618	0.41757	1	117100			31672	1030	20935	20945	36104	36104					0.10224415587595104
LLPTPLLLKR	10	Unmodified	_LLPTPLLLKR_					0	0	0			REV__ENSG00000105520|ENST00000688289|PLPPR2	REV__ENSG00000105520|ENST00000688289|PLPPR2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3541259765625	2	582.397359	1162.78016	-0.28469	-0.0001658	3.6826	0.0021447	3.3979	0.0019789	582.3993911830968	103.54	0.25436	103.54	103.43	103.68	0					6	5	2	0	0	0	0.37624	1	10635	10635		16.473	1.6083	1	70630	+		31673	17547	20936	20946	36105	36105					0.2052859363866446
LLPTPLLLKR	10	Unmodified	_LLPTPLLLKR_					0	0	0			REV__ENSG00000105520|ENST00000688289|PLPPR2	REV__ENSG00000105520|ENST00000688289|PLPPR2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.353759765625	2	582.397359	1162.78016	0.16831	9.8024E-05	2.9986	0.0017463	3.1669	0.0018444	582.3985921698003	103.48	0.55923	103.53	103.36	103.92	0.041489					21	13	2	0	0	0	0.37624	1	11208	11208		10.866	0	1	172870	+		31674	17547	20936	20946	36106	36106					0.2052859363866446
LLPTPLLLKR	10	Unmodified	_LLPTPLLLKR_					0	0	0			REV__ENSG00000105520|ENST00000688289|PLPPR2	REV__ENSG00000105520|ENST00000688289|PLPPR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.353759765625	2	582.397359	1162.78016	0.72086	0.00041983	3.6302	0.0021142	4.3511	0.002534	582.399170837992	103.04	0.26956	103.22	103.16	103.43	0.18298					10	6	2	0	0	0	0.37624	1	10908	10908		10.866	4.9445	1	223050	+		31675	17547	20936	20946	36107	36107					0.2052859363866446
LLPTPLLLKR	10	Unmodified	_LLPTPLLLKR_					0	0	0			REV__ENSG00000105520|ENST00000688289|PLPPR2	REV__ENSG00000105520|ENST00000688289|PLPPR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.354248046875	2	582.397359	1162.78016	0.88313	0.00051434	-4.2136	-0.002454	-3.3305	-0.0019397	582.3948609335557	103.41	0.26586	103.53	103.4	103.67	0.12622					12	6	3	0	0	0	0.37624	1	10954	10954		21.96	9.753	1	676250	+		31676	17547	20936	20946	36108	36108					0.2052859363866446
LLPTPLLLKR	10	Unmodified	_LLPTPLLLKR_					0	0	0			REV__ENSG00000105520|ENST00000688289|PLPPR2	REV__ENSG00000105520|ENST00000688289|PLPPR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353515625	2	582.397359	1162.78016	-1.3467	-0.00078429	4.4274	0.0025785	3.0807	0.0017942	582.4000703033305	103.4	0.34322	103.51	103.27	103.61	0.11494					16	8	3	0	0	0	0.37624	1	10835	10835		16.473	0.83134	1	215410	+		31677	17547	20936	20946	36109	36109					0.2052859363866446
LLPTTLPDI	9	Unmodified	_LLPTTLPDI_					0	0	0			REV__nc|ENSG00000154134|Q96MS0-2|ROBO3	REV__nc|ENSG00000154134|Q96MS0-2|ROBO3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7947692871094	2	491.794601	981.574648	-0.05486	-2.698E-05	1.5379	0.00075633	1.483	0.00072935	491.79521966656876	43.339	1.2355	43.289	42.859	44.095	-0.050308					43	29	2	0	0	0	0.7932	1	2990	2990		24.203	2.2429	1	209020	+		31678	29941	20937	20947	36110	36110					0.08312395388554705
LLPVEADIL	9	Unmodified	_LLPVEADIL_					0	0	0		ENSG00000082996|ENST00000392894|RNF13;ENST00000481241.1_1_3:180491477-180491675:-|nuORF	ENSG00000082996|ENST00000392894|RNF13	ENSG00000082996|ENST00000392894|RNF13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7960510253906	2	491.794601	981.574648	-0.22794	-0.0001121	2.4317	0.0011959	2.2037	0.0010838	491.795700180553	50.73	2.2718	51.177	50.348	52.62	0.4476					135	54	3	0	0	0	0.77546	1	5073	5073		31.955	5.1588	1	1342800			31679	1493	20938	20948	36111	36111					0.08312395388554705
LLPVFARYA	9	Unmodified	_LLPVFARYA_					0	0	0			REV__ENSG00000204165|ENST00000374251|CXorf65	REV__ENSG00000204165|ENST00000374251|CXorf65	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.8167114257812	2	525.310752	1048.60695	4.3706	0.0022959	-0.062644	-3.2908E-05	4.308	0.002263	525.8133681798666	106.13	0.67313	106.32	105.97	106.64	0.18647					74	28	4	0	0	0	0.76996	1	12996	12996		33.516	7.9415	1	163420	+		31680	23465	20939	20949	36112	36112					0.08459227582216045
LLPVIVTYLVS	11	Unmodified	_LLPVIVTYLVS_					0	0	0			REV__ENSG00000197532|ENST00000641622|OR6Y1	REV__ENSG00000197532|ENST00000641622|OR6Y1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.8832397460938	2	608.881207	1215.74786	4.9177	0.0029943	-1.4468	-0.0008809	3.471	0.0021134	608.8800497135209	107.73	0.32504	107.85	107.59	107.91	0.11715					40	13	4	0	0	0	0.77937	1	13165	13165		15.642	0	1	4321600	+		31681	23242	20940	20950	36113	36113					0.1486176144496767
LLPVKTAP	8	Unmodified	_LLPVKTAP_					0	0	0		ENST00000600988.1_1_19:36250047-36250251:+|nuORF	ENST00000600988.1_1_19:36250047-36250251:+|nuORF	ENST00000600988.1_1_19:36250047-36250251:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77410888671875	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.88915	1	3415	3415		35.201	3.2459	1	11423000			31682	14384	20941	20951	36114	36114					0.1071246477083605
LLPVLGLLVSS	11	Unmodified	_LLPVLGLLVSS_					0	0	0		nc|ENSG00000104918|Q9HD89-2|RETN;ENSG00000104918|ENST00000221515|RETN	nc|ENSG00000104918|Q9HD89-2|RETN	nc|ENSG00000104918|Q9HD89-2|RETN	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.029296875	2	555.860275	1109.706	-1.6264	-0.00090408	-0.41423	-0.00023026	-2.0407	-0.0011343	555.8600876731738	15.775	0.14121	15.775	15.725	15.866	0					8	5	2	0	0	0	0.17643	1	66	66		19.997	0	1	32224			31683	2168	20942	20952	36115	36115					0.15553205756464195
LLPVLHHK	8	Unmodified	_LLPVLHHK_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8043518066406	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.117	1	42.117	41.617	42.617	0								0	0	0	0.29631	1	2896	2896		25.45	0	1				31684	1504	20943	20953	36116	36116					0.11714664647649897
LLPVLHHK	8	Unmodified	_LLPVLHHK_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8056640625	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.51	1	42.51	42.01	43.01	0								0	0	0	0.29568	1	2952	2952		35.201	10.998	1				31685	1504	20943	20953	36117	36117					0.11714664647649897
LLPVLHHK	8	Unmodified	_LLPVLHHK_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.80694580078125	2	478.805637	955.596721	0.22693	0.00010865	1.2127	0.00058062	1.4396	0.00068928	478.8061448766097	39.22	1.8064	39.308	38.205	40.011	0.088375					88	52	2	0	0	0	0.82419	1	2450	2450		13.775	0	1	295310			31686	1504	20943	20953	36118	36118					0.11714664647649897
LLPVLLTVLA	10	Unmodified	_LLPVLLTVLA_					0	0	0			REV__ENSG00000108823|ENST00000262018|SGCA	REV__ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.361083984375	2	526.359911	1050.70527	-1.5923	-0.00083811	3.7176	0.0019568	2.1254	0.0011187	526.3617428180578	33.41	1.543	33.41	33.111	34.654	0					182	44	5	0	0	0	0.86201	1	1824	1824		24.203	0	1	7280900	+		31687	17733	20944	20954	36119	36119					0.1819441110740172
LLPVLLTVLA	10	Unmodified	_LLPVLLTVLA_					0	0	0			REV__ENSG00000108823|ENST00000262018|SGCA	REV__ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.361083984375	2	526.359911	1050.70527	-1.5676	-0.00082514	3.904	0.0020549	2.3364	0.0012298	526.3617973555264	35.031	1.6441	35.031	34.615	36.259	0					148	43	4	0	0	0	0.86201	2	1921	1921;1959		30.504	4.8428	1	1307600	+		31688	17733	20944	20954	36120;36121	36120					0.1819441110740172
LLPVLLTVLA	10	Unmodified	_LLPVLLTVLA_					0	0	0			REV__ENSG00000108823|ENST00000262018|SGCA	REV__ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3609619140625	2	526.359911	1050.70527	-0.46682	-0.00024572	2.8843	0.0015182	2.4174	0.0012724	526.3612792747932	37.192	2.9497	37.138	36.203	39.152	-0.053555					173	66	5	0	0	0	0.85939	1	2567	2567		23.042	5.6775	1	2681300	+		31689	17733	20944	20954	36122	36122					0.1819441110740172
LLPVLLTVLA	10	Unmodified	_LLPVLLTVLA_					0	0	0			REV__ENSG00000108823|ENST00000262018|SGCA	REV__ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.361083984375	2	526.359911	1050.70527	-0.23001	-0.00012107	2.5809	0.0013585	2.3509	0.0012374	526.3611422284945	33.372	1.4852	33.418	33.076	34.561	0.045849					221	65	5	0	0	0	0.85939	2	1663	1655;1663		24.203	1.1603	1	5657100	+		31690	17733	20944	20954	36123;36124	36124					0.1819441110740172
LLPVLLTVLA	10	Unmodified	_LLPVLLTVLA_					0	0	0			REV__ENSG00000108823|ENST00000262018|SGCA	REV__ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3606567382812	2	526.359911	1050.70527	0.25296	0.00013315	2.2538	0.0011863	2.5068	0.0013195	526.3609378895691	36.94	1.9118	37.039	36.051	37.962	0.099277					159	60	4	0	0	0	0.84874	1	2089	2089		18.324	0	1	1522000	+		31691	17733	20944	20954	36125	36125					0.1819441110740172
LLPVSPNI	8	Unmodified	_LLPVSPNI_					0	0	0			REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.302734375	2	426.763104	851.511654	0.42564	0.00018165	3.294	0.0014058	3.7196	0.0015874	426.7644639538414	66.454	1.2025	66.581	66.347	67.55	0.12649					85	53	2	0	0	0	0.4196	1	5901	5901		12.959	0.75233	1	258850	+		31692	25292	20945	20955	36126	36126					0.07995874391190227
LLPVSPNI	8	Unmodified	_LLPVSPNI_					0	0	0			REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	426.763104	851.511654	-1.4908	-0.00063622	4.8295	0.0020611	3.3387	0.0014248	426.76513144569304	66.903	0.79088	66.903	66.445	67.236	0	0.24874	0.00076978	NaN	12.959	60	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111140	+		31693	25292	20945	20955							0.07995874391190227
LLPVSPNI	8	Unmodified	_LLPVSPNI_					0	0	0			REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	426.763104	851.511654	-0.18288	-7.8047E-05	3.3015	0.001409	3.1186	0.0013309	426.76450161726115	66.705	0.74459	66.721	66.415	67.159	0.016205	0.067214	-0.00053445	NaN	12.959	57	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211640	+		31694	25292	20945	20955							0.07995874391190227
LLPVSPNI	8	Unmodified	_LLPVSPNI_					0	0	0			REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	426.763104	851.511654	1.2666	0.00054054	2.1191	0.00090434	3.3857	0.0014449	426.76397785393357	66.52	0.87538	66.549	66.27	67.145	0.028587	-0.10495	-0.0015437	NaN	12.959	68	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178710	+		31695	25292	20945	20955							0.07995874391190227
LLPVSPNI	8	Unmodified	_LLPVSPNI_					0	0	0			REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	426.763104	851.511654	-1.7343	-0.00074014	5.1675	0.0022053	3.4332	0.0014651	426.76525422838336	66.392	0.72813	66.522	66.272	67	0.12995	-0.13212	0.0010582	NaN	12.959	56	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	205910	+		31696	25292	20945	20955							0.07995874391190227
LLPVSPNI	8	Unmodified	_LLPVSPNI_					0	0	0			REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	REV__ENST00000343348.10_1_5:115779466-115779568:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	426.763104	851.511654	-1.099	-0.00046901	4.6908	0.0020018	3.5918	0.0015328	426.76498370869547	66.596	0.91795	66.648	66.363	67.281	0.052368	-0.0056179	0.00065133	NaN	12.959	72	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	221100	+		31697	25292	20945	20955							0.07995874391190227
LLPVVISD	8	Unmodified	_LLPVVISD_					0	0	0		ENST00000503958.1_1_5:24487774-24493064:-|nuORF;ENSG00000040731|ENST00000264463|CDH10;nc|ENSG00000113361|P55285-2|CDH6;ENSG00000113361|ENST00000265071|CDH6	ENST00000503958.1_1_5:24487774-24493064:-|nuORF;ENSG00000113361|ENST00000265071|CDH6	ENST00000503958.1_1_5:24487774-24493064:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.261474609375	2	428.262936	854.51132	-1.8497	-0.00079216	-1.179	-0.00050492	-3.0287	-0.0012971	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.86791	1	9204	9204		28.254	1.4582	1	31323000			31698	929;2717	20946	20956	36127	36127					0.0782445467133357
LLPVVISD	8	Unmodified	_LLPVVISD_					0	0	0		ENST00000503958.1_1_5:24487774-24493064:-|nuORF;ENSG00000040731|ENST00000264463|CDH10;nc|ENSG00000113361|P55285-2|CDH6;ENSG00000113361|ENST00000265071|CDH6	ENST00000503958.1_1_5:24487774-24493064:-|nuORF;ENSG00000113361|ENST00000265071|CDH6	ENST00000503958.1_1_5:24487774-24493064:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2614440917969	2	428.262936	854.51132	-1.021	-0.00043726	-1.8984	-0.00081301	-2.9194	-0.0012503	428.26203928148993	90.556	2.3584	91.026	90.524	92.882	0.47068					198	56	5	0	0	0	0.92176	1	10944	10944		46.766	4.292	1	38446000			31699	929;2717	20946	20956	36128	36128					0.0782445467133357
LLPVVLGALL	10	Unmodified	_LLPVVLGALL_					0	0	0			REV__ENST00000473343.5_1_1:6521496-6523040:-|nuORF	REV__ENST00000473343.5_1_1:6521496-6523040:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34796142578125	2	504.346803	1006.67905	0.25279	0.00012749	2.2254	0.0011224	2.4782	0.0012499	504.3477701271758	36.647	1.9451	36.928	36.004	37.949	0.28173					113	47	4	0	0	0	0.85108	2	2837	2837;2848		19.36	6.4008	1	1998100	+		31700	23691	20947	20957	36129;36130	36129					0.175981419359573
LLPVVLGALL	10	Unmodified	_LLPVVLGALL_					0	0	0			REV__ENST00000473343.5_1_1:6521496-6523040:-|nuORF	REV__ENST00000473343.5_1_1:6521496-6523040:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.347900390625	2	504.346803	1006.67905	2.0026	0.00101	0.50234	0.00025335	2.5049	0.0012633	504.34690233028635	36.516	1.5993	36.956	36.186	37.785	0.44043					102	38	4	0	0	0	0.85108	1	2848	2848		19.36	0	1	2044400	+		31701	23691	20947	20957	36131	36131					0.175981419359573
LLPWRAVC	8	Unmodified	_LLPWRAVC_					0	0	0			REV__ENST00000487003.5_1_2:135927369-135933054:+|nuORF	REV__ENST00000487003.5_1_2:135927369-135933054:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2771911621094	2	479.270573	956.526593	0.75552	0.0003621	1.7815	0.00085383	2.537	0.0012159	479.2712212508962	97.83	0.43755	97.991	97.71	98.148	0.16074					14	9	2	0	0	0	0.4196	1	10125	10125		14.664	8.3514	1	40651	+		31702	27563	20948	20958	36132	36132					0.04659042987520934
LLPWRAVC	8	Unmodified	_LLPWRAVC_					0	0	0			REV__ENST00000487003.5_1_2:135927369-135933054:+|nuORF	REV__ENST00000487003.5_1_2:135927369-135933054:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	479.270573	956.526593	-0.097506	-4.6732E-05	2.7779	0.0013314	2.6804	0.0012846	479.2718063252994	98.387	0.57454	98.444	98.138	98.712	0.056831	0.35398	-0.00066655	NaN	14.664	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37316	+		31703	27563	20948	20958							0.04659042987520934
LLPWRAVC	8	Unmodified	_LLPWRAVC_					0	0	0			REV__ENST00000487003.5_1_2:135927369-135933054:+|nuORF	REV__ENST00000487003.5_1_2:135927369-135933054:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	479.270573	956.526593	2.3631	0.0011326	0.37039	0.00017752	2.7335	0.0013101	479.2702832313656	98.348	0.4335	98.293	98.033	98.466	-0.054817	0.20313	-0.0029743	NaN	14.664	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32676	+		31704	27563	20948	20958							0.04659042987520934
LLPWRAVC	8	Unmodified	_LLPWRAVC_					0	0	0			REV__ENST00000487003.5_1_2:135927369-135933054:+|nuORF	REV__ENST00000487003.5_1_2:135927369-135933054:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	479.270573	956.526593	-0.44976	-0.00021556	3.0477	0.0014607	2.598	0.0012451	479.27164460496516	98.029	0.39716	98.077	97.968	98.365	0.048157	-0.012374	-0.00040794	NaN	14.664	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40177	+		31705	27563	20948	20958							0.04659042987520934
LLPYLARLS	9	Unmodified	_LLPYLARLS_					0	0	0		ENST00000545947.5_1_3:49524845-49547950:+|nuORF;ENST00000541308.5_1_3:49530394-49547950:+|nuORF;ENST00000421560.5_1_3:49507623-49547950:+|nuORF;ENST00000308775.6_1_3:49507623-49547947:+|nuORF	ENST00000545947.5_1_3:49524845-49547950:+|nuORF	ENST00000545947.5_1_3:49524845-49547950:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.32386	1044.63317	0.69753	0.00036504	-0.29309	-0.00015338	0.40445	0.00021166	523.3232804592692	86.595	0.12794	86.744	86.656	86.783	0.14902					4	2	2	0	0	0	0.20789	1	8523	8523		17.365	0.89182	1	19916			31706	9892	20949	20959	36133	36133					0.1126349675369056
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2994384765625	3	491.298986	1470.87513	2.845	0.0013977	-2.3699	-0.0011643	0.4751	0.00023341	491.2976183766875	106.89	1.6193	106.85	106.02	107.64	-0.034134					114	37	5	0	0	0	0.70584	3	11824	11812;11824;11837		30.569	21.357	1	1165300			31707	10567	20950	20960	36134;36135;36136	36135					0.15852527109836956
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2998352050781	3	491.298986	1470.87513	2.8435	0.001397	-2.6058	-0.0012802	0.23777	0.00011682	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.78391	6	12492	12424;12482;12492;12507;12638;12895		14.694	5.4819	1	3274400			31708	10567	20950	20960	36137;36138;36139;36140;36141;36142	36139					0.15852527109836956
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.2995910644531	3	491.298986	1470.87513	-0.91352	-0.00044881	1.2687	0.00062333	0.35523	0.00017452	491.29952222850153	106.73	1.7069	106.77	105.94	107.65	0.03688					94	39	3	0	0	0	0.78683	1	11683	11683		14.086	1.1285	1	1168300			31709	10567	20950	20960	36143	36143					0.15852527109836956
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.2982177734375	3	491.298986	1470.87513	-0.62565	-0.00030738	1.318	0.00064755	0.69239	0.00034017	491.29948464840265	111.63	0.32854	111.74	111.48	111.81	0.11118					17	8	3	0	0	0	0.78391	1	12033	12033		14.694	1.1857	1	2735700			31710	10567	20950	20960	36144	36144					0.15852527109836956
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.302001953125	3	491.298986	1470.87513	-0.62661	-0.00030785	1.354	0.0006652	0.72735	0.00035735	491.63417971121197	111.79	0.29091	111.9	111.86	112.15	0.11118					14	9	2	0	0	0	0.75906	1	12062	12062		20.03	0	1	254370			31711	10567	20950	20960	36145	36145					0.15852527109836956
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.2987365722656	3	491.298986	1470.87513	-1.6433	-0.00080736	1.8158	0.0008921	0.1725	8.4748E-05	491.29989994229794	112.5	0.70615	112.47	112.28	112.99	-0.032333					41	19	3	0	0	0	0.75906	1	11992	11992		20.03	6.5225	1	409620			31712	10567	20950	20960	36146	36146					0.15852527109836956
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	491.298986	1470.87513	-0.079057	-3.8841E-05	0.28761	0.0001413	0.20855	0.00010246	491.2990087355693	106.91	1.2839	106.88	106.09	107.37	-0.034409	-0.018031	-0.0006358	NaN	30.569	58	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	207470			31713	10567	20950	20960							0.15852527109836956
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	491.298986	1470.87513	-0.62525	-0.00030719	0.91796	0.00045099	0.29271	0.00014381	491.29930131653384	106.64	2.018	106.79	105.68	107.7	0.14842	-0.11018	0.00029328	NaN	30.569	129	49	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	481140			31714	10567	20950	20960							0.15852527109836956
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	491.298986	1470.87513	0.79449	0.00039033	-0.34024	-0.00016716	0.45425	0.00022317	491.29869274610786	106.76	1.3791	106.86	106.3	107.68	0.097885	-0.037712	-0.0015612	NaN	30.569	115	32	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	875440			31715	10567	20950	20960							0.15852527109836956
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	491.298986	1470.87513	-1.6433	-0.00080735	1.8495	0.00090866	0.2062	0.00010131	491.2997894166035	111.34	0.60963	111.32	111.19	111.8	-0.01989	-0.18966	0.002766	NaN	14.694	40	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72119			31716	10567	20950	20960							0.15852527109836956
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	491.298986	1470.87513	-1.6433	-0.00080736	2.1591	0.0010608	0.51577	0.0002534	491.29992096749294	106.84	1.3816	106.9	106.26	107.64	0.053749	0.0034253	0.0021226	NaN	30.569	104	32	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	745450			31717	10567	20950	20960							0.15852527109836956
LLPYVLRIWLW	11	Unmodified	_LLPYVLRIWLW_					0	0	0		ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	491.298986	1470.87513	1.543	0.00075805	-1.2315	-0.00060505	0.31142	0.000153	491.2983691145041	106.99	0.71441	107.1	106.63	107.34	0.10396	0.20214	-0.0028749	NaN	30.569	42	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183990			31718	10567	20950	20960							0.15852527109836956
LLQAALLCV	9	Unmodified	_LLQAALLCV_					0	0	0		ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2890319824219	2	472.285889	942.557224	2.0257	0.00095671	1.7357	0.00081974	3.7614	0.0017765	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.7932	1	10639	10639		25.45	0.94616	1	50843000			31719	3909	20951	20961	36147	36147					0.08364776581913702
LLQAALLCV	9	Unmodified	_LLQAALLCV_					0	0	0		ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.286865234375	2	472.285889	942.557224	2.799	0.001322	2.3666	0.0011177	5.1656	0.0024396	472.28731595606604	102.41	1.2058	102.36	101.75	102.95	-0.047005					48	28	2	0	0	0	0.76996	1	11203	11203		33.516	1.5607	1	215870			31720	3909	20951	20961	36148	36148					0.08364776581913702
LLQAALLCV	9	Unmodified	_LLQAALLCV_					0	0	0		ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2880554199219	2	472.285889	942.557224	0.76193	0.00035985	3.8005	0.0017949	4.5625	0.0021548	472.28771256093336	99.111	1.7073	99.267	98.769	100.48	0.15659					91	39	3	0	0	0	0.7932	1	10287	10287		26.796	6.3143	1	525470			31721	3909	20951	20961	36149	36149					0.08364776581913702
LLQAALLCV	9	Unmodified	_LLQAALLCV_					0	0	0		ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28631591796875	2	472.285889	942.557224	0.77515	0.00036609	4.1826	0.0019754	4.9578	0.0023415	472.2880406443957	100.91	1.1997	101.05	100.29	101.49	0.14352					49	28	2	0	0	0	0.76402	1	10582	10582		35.201	3.2459	1	230310			31722	3909	20951	20961	36150	36150					0.08364776581913702
LLQAALLCV	9	Unmodified	_LLQAALLCV_					0	0	0		ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	472.285889	942.557224	-0.8713	-0.0004115	6.0254	0.0028457	5.1541	0.0024342	472.2889993333164	102.47	0.82295	102.47	102.13	102.96	0	0.1148	0.00069212	NaN	33.516	35	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116950			31723	3909	20951	20961							0.08364776581913702
LLQAALLCV	9	Unmodified	_LLQAALLCV_					0	0	0		ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	ENSG00000134049|ENST00000256433|IER3IP1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	472.285889	942.557224	-0.020844	-9.8445E-06	5.2929	0.0024998	5.2721	0.0024899	472.2886401095811	102.22	1.1993	102.27	101.63	102.83	0.043198	-0.091056	2.3559E-07	NaN	33.516	45	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	302630			31724	3909	20951	20961							0.08364776581913702
LLQAETERLE	10	Unmodified	_LLQAETERLE_					0	0	0		nc|ENSG00000080845|Q9Y2H0-3|DLGAP4;nc|ENSG00000080845|Q9Y2H0-1|DLGAP4;ENSG00000080845|ENST00000339266|DLGAP4	nc|ENSG00000080845|Q9Y2H0-3|DLGAP4	nc|ENSG00000080845|Q9Y2H0-3|DLGAP4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	600.3336181640625	2	601.324785	1200.63502	-0.52332	-0.00031469	-3.4957	-0.0021021	-4.0191	-0.0024168	601.3227977252739	94.799	0.63487	94.867	94.714	95.349	0.068336					19	14	2	0	0	0	0.37624	1	9877	9877		25.574	5.5436	1	38961			31725	1454	20952	20962	36151	36151					0.04272460980996584
LLQAETERLE	10	Unmodified	_LLQAETERLE_					0	0	0		nc|ENSG00000080845|Q9Y2H0-3|DLGAP4;nc|ENSG00000080845|Q9Y2H0-1|DLGAP4;ENSG00000080845|ENST00000339266|DLGAP4	nc|ENSG00000080845|Q9Y2H0-3|DLGAP4	nc|ENSG00000080845|Q9Y2H0-3|DLGAP4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	601.324785	1200.63502	-0.27112	-0.00016303	-3.7793	-0.0022726	-4.0504	-0.0024356	601.3223187964729	94.788	0.75584	94.835	94.413	95.168	0.046173	-0.016321	-0.00012307	NaN	25.574	21	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46470			31726	1454	20952	20962							0.04272460980996584
LLQAHTSRK	9	Unmodified	_LLQAHTSRK_					0	0	0			REV__nc|ENSG00000231004|P0C854|CECR9	REV__nc|ENSG00000231004|P0C854|CECR9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3107299804688	2	527.311815	1052.60908	0.30458	0.00016061	-1.4031	-0.00073988	-1.0985	-0.00057927	527.3109007634706	82.716	1.747	83.19	82.836	84.583	0.47384					72	41	3	0	0	0	0.31972	1	9594	9594		63.306	2.3343	1	1438500	+		31727	30219	20953	20963	36152	36152					0.08487656320039605
LLQAIPRVIMA	11	Unmodified	_LLQAIPRVIMA_					0	0	0		ENSG00000260456|ENST00000567970|C16orf95	ENSG00000260456|ENST00000567970|C16orf95	ENSG00000260456|ENST00000567970|C16orf95	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8801879882812	2	612.878476	1223.7424	0.91302	0.00055957	0.73286	0.00044915	1.6459	0.0010087	612.8787003590065	104.47	3.5452	104.58	103.94	107.49	0.11684					293	87	6	0	0	0	0.67493	1	11202	11202		35.618	3.984	1	81912000			31728	8919	20954	20964	36153	36153					0.13947759381517244
LLQALCAAVAR	11	Carbamidomethyl (C)	_LLQALC(Carbamidomethyl (C))AAVAR_	LLQALC(1)AAVAR		LLQALC(43)AAVAR		0	1	0		ENSG00000120318|ENST00000239440|ARAP3;nc|ENSG00000120318|Q8WWN8-2|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	ENSG00000120318|ENST00000239440|ARAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.3434448242188	2	593.342258	1184.66996	0.89398	0.00053044	2.8743	0.0017055	3.7683	0.0022359	593.3438403936742	103.36	2.3929	103.49	103.05	105.45	0.12621					170	59	5	0	0	0	0.61369	1	11030	11030		42.864	14.982	1	4092800			31729	3125	20955	20965	36154	36154	36				0.08501425307940735
LLQAQGGRP	9	Unmodified	_LLQAQGGRP_					0	0	0		ENST00000225916.9_1_17:40265676-40265772:-|nuORF	ENST00000225916.9_1_17:40265676-40265772:-|nuORF	ENST00000225916.9_1_17:40265676-40265772:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.2680358886719	2	470.272158	938.529764	-1.3301	-0.00062551	1.347	0.00063347	0.016922	7.9581E-06	470.27272461569635	91.968	1.6857	92.431	92.02	93.705	0.46249					82	39	3	0	0	0	0.76996	1	10957	10957		33.516	4.366	1	881790			31730	9192	20956	20966	36155	36155					0.05804009365908769
LLQASVPSC	9	Unmodified	_LLQASVPSC_					0	0	0			REV__nc|ENSG00000203485|Q27J81-2|INF2	REV__nc|ENSG00000203485|Q27J81-2|INF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	459.2400817871094	2	459.241678	916.468803	-0.30768	-0.0001413	-3.312	-0.001521	-3.6197	-0.0016623	459.23999743377124	47.433	1.4389	47.345	46.818	48.257	-0.087646					86	43	3	0	0	0	0.44421	1	3580	3580		54.776	0	1	943680	+		31731	23432	20957	20967	36156	36156					0.007227362714502306
LLQCQGHGAP	10	Unmodified	_LLQCQGHGAP_					0	0	0		ENST00000534359.1_1_11:3690561-3692570:-|nuORF	ENST00000534359.1_1_11:3690561-3692570:-|nuORF	ENST00000534359.1_1_11:3690561-3692570:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.254150390625	2	512.255651	1022.49675	-0.40094	-0.00020538	-3.2024	-0.0016405	-3.6034	-0.0018458	512.253883322564	54.419	1.295	54.474	54.011	55.305	0.055614					87	42	3	0	0	0	0.5766	1	4523	4523		51.335	12.083	1	718970			31732	13407	20958	20968	36157	36157					-0.013599407484548465
LLQDTSKM	8	Unmodified	_LLQDTSKM_					0	0	0		nc|ENSG00000164074|Q0P651-4|ABHD18;nc|ENSG00000164074|Q0P651-3|ABHD18;nc|ENSG00000164074|Q0P651-2|ABHD18;ENST00000473040.6_1_4:128905516-128956965:+|nuORF;nc|ENSG00000164074|Q0P651|ABHD18;ENSG00000164074|ENST00000645843|ABHD18	nc|ENSG00000164074|Q0P651-4|ABHD18	nc|ENSG00000164074|Q0P651-4|ABHD18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.245361328125	2	468.24696	934.479368	-1.0647	-0.00049855	-2.603	-0.0012189	-3.6677	-0.0017174	468.2456241225619	47.383	3.6723	47.402	45.915	49.587	0.018967					223	102	4	0	0	0	0.90465	1	3608	3608		40.573	1.7665	1	7165000			31733	5911	20959	20969	36158	36158					0.00950718925878391
LLQEAIIP	8	Unmodified	_LLQEAIIP_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.7765197753906	2	448.776211	895.537869	-0.72332	-0.00032461	3.8824	0.0017423	3.1591	0.0014177	448.7778493826416	71.806	1.0797	71.767	71.407	72.487	-0.039009					61	41	2	0	0	0	0.88915	1	7000	7000		35.201	3.2459	1	110710			31734	3317	20960	20970	36159	36159					0.08592143562668753
LLQEGEGKEF	10	Unmodified	_LLQEGEGKEF_					0	0	0			REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2977294921875	2	575.292953	1148.57135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.954	1	77.353	76.853	77.853	0.39969								0	0	0	0.45132	1	8744	8744		61.691	2.9093	1		+		31735	23119	20961	20971	36160	36160					0.003011005439020664
LLQFDKAIK	9	Unmodified	_LLQFDKAIK_					0	0	0		ENST00000452686.2_1_1:31736260-31736500:-|nuORF	ENST00000452686.2_1_1:31736260-31736500:-|nuORF	ENST00000452686.2_1_1:31736260-31736500:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.326904296875	2	538.329142	1074.64373	-0.15628	-8.4129E-05	-3.1712	-0.0017072	-3.3275	-0.0017913	538.3273734998361	103.57	1.2288	103.57	103.11	104.34	-0.0016403					90	29	4	0	0	0	0.77546	1	11076	11076		31.955	1.4512	1	1025700			31736	11924	20962	20972	36161	36161					0.1093947940810267
LLQFDKAIK	9	Unmodified	_LLQFDKAIK_					0	0	0		ENST00000452686.2_1_1:31736260-31736500:-|nuORF	ENST00000452686.2_1_1:31736260-31736500:-|nuORF	ENST00000452686.2_1_1:31736260-31736500:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3269653320312	2	538.329142	1074.64373	-1.4901	-0.00080219	-2.8806	-0.0015507	-4.3708	-0.0023529	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.78983	1	10737	10737		27.882	3.3631	1	93615000			31737	11924	20962	20972	36162	36162					0.1093947940810267
LLQFKLLKGIL	11	Unmodified	_LLQFKLLKGIL_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4068603515625	2	643.433941	1284.85333	0.94291	0.0006067	2.7583	0.0017748	3.7012	0.0023815	643.4373363565212	106.23	0.28953	106.33	106.19	106.48	0.099007					11	6	2	0	0	0	0.17478	1	11357	11357		15.642	4.7763	1	42875	+		31738	20445	20963	20973	36163	36163					0.2222972236129408
LLQGHPRALPQ	11	Unmodified	_LLQGHPRALPQ_					0	0	0		ENST00000575094.5_1_12:9801096-9801264:+|nuORF	ENST00000575094.5_1_12:9801096-9801264:+|nuORF	ENST00000575094.5_1_12:9801096-9801264:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	615.3579711914062	2	615.359296	1228.70404	-0.11045	-6.7968E-05	-2.8161	-0.0017329	-2.9266	-0.0018009	615.3576279299549	104.87	2.2143	104.87	104.31	106.53	0					144	52	4	0	0	0	0.70737	1	10815	10815		30.318	3.2704	1	1478900			31739	14044	20964	20974	36164	36164					0.09883589791229497
LLQGLPGLVR	10	Unmodified	_LLQGLPGLVR_					0	0	0		ENST00000574149.6_1_17:19314736-19316565:+|nuORF	ENST00000574149.6_1_17:19314736-19316565:+|nuORF	ENST00000574149.6_1_17:19314736-19316565:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.33984375	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.86444	1	10692	10692		14.865	1.9057	1	2530900			31740	14031	20965	20975	36165	36165					0.1408658801931324
LLQGLRVSWTT	11	Unmodified	_LLQGLRVSWTT_					0	0	0			REV__nc|ENSG00000175054|Q13535-2|ATR	REV__nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	637.3687744140625	2	637.366787	1272.71902	2.7628	0.0017609	3.0551	0.0019472	5.8179	0.0037081	637.3686513642523	105.87	2.2422	105.84	105.02	107.26	-0.03714					153	52	4	0	0	0	0.7144	1	11670	11670		29.17	3.1067	1	1640000	+		31741	22035	20966	20976	36166	36166					0.09357036868550495
LLQGNSVPG	9	Unmodified	_LLQGNSVPG_					0	0	0		ENST00000310924.6_1_17:77912328-77912418:-|nuORF	ENST00000310924.6_1_17:77912328-77912418:-|nuORF	ENST00000310924.6_1_17:77912328-77912418:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.74456787109375	2	442.745442	883.476331	-1.7989	-0.00079646	0.28527	0.0001263	-1.5136	-0.00067016	442.7455363833493	89.31	0.69753	89.482	89.168	89.866	0.17234					44	15	4	0	0	0	0.7932	1	8873	8873		26.693	1.1189	1	882250			31742	9914	20967	20977	36167	36167					0.02993211863383749
LLQHHRIH	8	Unmodified	_LLQHHRIH_					0	0	0		nc|ENSG00000197841|Q2M3W8-2|ZNF181;nc|ENSG00000197841|Q2M3W8-3|ZNF181;ENSG00000197841|ENST00000492450|ZNF181	nc|ENSG00000197841|Q2M3W8-2|ZNF181	nc|ENSG00000197841|Q2M3W8-2|ZNF181	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3074951171875	2	527.306867	1052.59918	-0.62415	-0.00032912	-3.4671	-0.0018282	-4.0912	-0.0021573	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.86288	1	10190	10190		26.796	0	1	949980			31743	8204	20968	20978	36168	36168					0.07498513105315396
LLQHVVLNL	9	Unmodified	_LLQHVVLNL_					0	0	0		ENST00000494070.1_1_10:97599120-97599544:+|nuORF	ENST00000494070.1_1_10:97599120-97599544:+|nuORF	ENST00000494070.1_1_10:97599120-97599544:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.826904296875	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.72402	1	10291	10291		38.806	3.1879	1	23918000			31744	12744	20969	20979	36169	36169					0.12214899127980061
LLQILTEQRLP	11	Unmodified	_LLQILTEQRLP_					0	0	0			REV__ENST00000251334.6_2_17:59945072-59945235:-|nuORF	REV__ENST00000251334.6_2_17:59945072-59945235:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7879333496094	3	441.938005	1322.79219	-1.2755	-0.00056368	-3.6893	-0.0016305	-4.9648	-0.0021941	442.2713471395518	39.029	0.1711	39.371	39.273	39.444	0.34187					5	3	2	0	0	0	0.17537	1	3243	3243		14.694	0.60766	1	34021	+		31745	24287	20970	20980	36170	36170					0.1437016559118547
LLQIRSLGY	9	Unmodified	_LLQIRSLGY_					0	0	0			REV__ENST00000567020.6_2_16:2546055-2546238:+|nuORF	REV__ENST00000567020.6_2_16:2546055-2546238:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.817138671875	2	531.818941	1061.62333	-0.033207	-1.766E-05	-3.353	-0.0017832	-3.3862	-0.0018009	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.78058	1	8627	8627		30.504	5.0535	1	1254600	+		31746	28876	20971	20981	36171	36171					0.09498308748334239
LLQKLLGTAY	10	Unmodified	_LLQKLLGTAY_					0	0	0			REV__ENSG00000130827|ENST00000369682|PLXNA3	REV__ENSG00000130827|ENST00000369682|PLXNA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3401489257812	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.86272	1	12821	12821		24.519	0.99649	1	4071000	+		31747	18914	20972	20982	36172	36172					0.11535748579603933
LLQKVGLTYVL	11	Unmodified	_LLQKVGLTYVL_					0	0	0			REV__ENST00000458319.1_1_7:14230834-14230924:+|nuORF	REV__ENST00000458319.1_1_7:14230834-14230924:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.22906494140625	3	416.26383	1245.76966	-1.083	-0.00045081	-1.322	-0.00055031	-2.405	-0.0010011	416.2635373480322	42.231	0.23958	42.645	42.505	42.745	0.4139					7	5	2	0	0	0	0.17537	1	3749	3749		14.694	2.487	1	48190	+		31748	26984	20973	20983	36173	36173					0.15660566193560044
LLQLCRGHL	9	Unmodified	_LLQLCRGHL_					0	0	0			REV__ENST00000426654.6_1_16:69660389-69681075:+|nuORF	REV__ENST00000426654.6_1_16:69660389-69681075:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8076782226562	2	526.805311	1051.59607	1.8843	0.00099267	2.449	0.0012902	4.3333	0.0022828	526.806675241247	99.062	1.2342	99.425	98.602	99.837	0.36292					102	30	5	0	0	0	0.39977	1	11872	11872		57.811	7.7867	1	32274000	+		31749	26548	20974	20984	36174	36174					0.07233501936298126
LLQLCRGHL	9	Unmodified	_LLQLCRGHL_					0	0	0			REV__ENST00000426654.6_1_16:69660389-69681075:+|nuORF	REV__ENST00000426654.6_1_16:69660389-69681075:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8076782226562	2	526.805311	1051.59607	1.4964	0.00078833	2.6369	0.0013891	4.1334	0.0021775	526.8069621242416	97.94	1.6392	98.317	97.185	98.824	0.37678					70	34	4	0	0	0	0.20789	1	11872	11872		57.811	7.7867	1	2595400	+		31750	26548	20974	20984	36175	36175					0.07233501936298126
LLQLGSGRN	9	Unmodified	_LLQLGSGRN_					0	0	0			REV__ENSG00000147912|ENST00000432825|FBXO10	REV__ENSG00000147912|ENST00000432825|FBXO10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2772521972656	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.67345	1	8197	8197		42.396	3.1433	1	1929800	+		31751	20091	20975	20985	36176	36176					0.060319920203255606
LLQLGSGRN	9	Unmodified	_LLQLGSGRN_					0	0	0			REV__ENSG00000147912|ENST00000432825|FBXO10	REV__ENSG00000147912|ENST00000432825|FBXO10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2777099609375	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.74721	1	8958	8958		37.159	3.2375	1	7289200	+		31752	20091	20975	20985	36177	36177					0.060319920203255606
LLQLGSGRN	9	Unmodified	_LLQLGSGRN_					0	0	0			REV__ENSG00000147912|ENST00000432825|FBXO10	REV__ENSG00000147912|ENST00000432825|FBXO10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27783203125	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.69624	1	10226	10226		40.778	4.3314	1	6350300	+		31753	20091	20975	20985	36178	36178					0.060319920203255606
LLQLHLLTKKK	11	Unmodified	_LLQLHLLTKKK_					0	0	0			REV__ENST00000226094.9_1_17:66533620-66538255:-|nuORF	REV__ENST00000226094.9_1_17:66533620-66538255:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.6360778808594	3	445.634257	1333.88094	-0.087691	-3.9078E-05	3.777	0.0016832	3.6894	0.0016441	445.6358753524641	36.614	1.1516	36.896	36.681	37.833	0.28173					135	27	6	0	0	0	0.81219	1	2948	2948		8.7993	1.7806	1	11171000	+		31754	17740	20976	20986	36179	36179					0.22735625621476174
LLQLLATG	8	Unmodified	_LLQLLATG_					0	0	0		chr7:48035630-48036208|13|12.0|0.52|4.54|+|0|C7orf57,C7orf57|1	chr7:48035630-48036208|13|12.0|0.52|4.54|+|0|C7orf57,C7orf57|1	chr7:48035630-48036208|13|12.0|0.52|4.54|+|0|C7orf57,C7orf57|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.7617492675781	2	414.763104	827.511654	1.2689	0.00052628	-4.3284	-0.0017953	-3.0596	-0.001269	414.7612423593211	88.129	2.1347	88.578	88.017	90.152	0.44893					145	51	4	0	0	0	0.90465	1	10407	10407		40.573	0	1	6571000			31755	499	20977	20987	36180	36180					0.09099874391176854
LLQLLGWVF	9	Unmodified	_LLQLLGWVF_					0	0	0		ENSG00000198743|ENST00000381151|SLC5A3	ENSG00000198743|ENST00000381151|SLC5A3	ENSG00000198743|ENST00000381151|SLC5A3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.8272094726562	2	544.828778	1087.643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.078	1	46.549	46.049	47.049	0.47139								0	0	0	0.31088	1	4319	4319		26.796	2.2769	1				31756	8319	20978	20988	36181	36181					0.10268684759080315
LLQLLPVS	8	Unmodified	_LLQLLPVS_					0	0	0		ENST00000515265.2_1_5:140022188-140024328:+|nuORF;ENST00000510336.5_1_5:140021201-140024680:+|nuORF;ENSG00000113119|ENST00000394671|TMCO6;nc|ENSG00000113119|Q96DC7-2|TMCO6	ENST00000515265.2_1_5:140022188-140024328:+|nuORF	ENST00000515265.2_1_5:140022188-140024328:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7879943847656	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.86791	1	2982	2982		28.254	0	1	11085000			31757	2698	20979	20989	36182	36182					0.11308733942325944
LLQLLPVS	8	Unmodified	_LLQLLPVS_					0	0	0		ENST00000515265.2_1_5:140022188-140024328:+|nuORF;ENST00000510336.5_1_5:140021201-140024680:+|nuORF;ENSG00000113119|ENST00000394671|TMCO6;nc|ENSG00000113119|Q96DC7-2|TMCO6	ENST00000515265.2_1_5:140022188-140024328:+|nuORF	ENST00000515265.2_1_5:140022188-140024328:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78778076171875	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.81548	1	2834	2834		20.482	0	1	15753000			31758	2698	20979	20989	36183	36183					0.11308733942325944
LLQLLRAQRV	10	Unmodified	_LLQLLRAQRV_					0	0	0			REV__ENST00000426654.6_1_16:69660389-69681075:+|nuORF	REV__ENST00000426654.6_1_16:69660389-69681075:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9295349121094	3	403.931185	1208.77173	-1.8895	-0.00076324	-2.2243	-0.00089846	-4.1138	-0.0016617	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.85441	1	3541	3541		20.837	1.5745	1	2300300	+		31759	26548	20980	20990	36184	36184					0.17569039722025082
LLQLLRAQRV	10	Unmodified	_LLQLLRAQRV_					0	0	0			REV__ENST00000426654.6_1_16:69660389-69681075:+|nuORF	REV__ENST00000426654.6_1_16:69660389-69681075:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.929443359375	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.385	1	47.297	46.797	47.797	-0.087646								0	0	0	0.45132	1	3540	3540		20.03	1.4994	1		+		31760	26548	20980	20990	36185	36185					0.17569039722025082
LLQLLVLLLTL	11	Unmodified	_LLQLLVLLLTL_					0	0	0		ENSG00000170439|ENST00000394252|METTL7B	ENSG00000170439|ENST00000394252|METTL7B	ENSG00000170439|ENST00000394252|METTL7B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.379638671875	2	626.43615	1250.85775	1.3741	0.00086076	-3.2959	-0.0020647	-1.9219	-0.0012039	626.4327821483367	105.45	0.55888	105.61	105.29	105.84	0.15924					30	14	3	0	0	0	0.181	1	11232	11232		14.865	3.9993	1	206520			31761	6589	20981	20991	36186	36186					0.2423518678419896
LLQLLVLLLTL	11	Unmodified	_LLQLLVLLLTL_					0	0	0		ENSG00000170439|ENST00000394252|METTL7B	ENSG00000170439|ENST00000394252|METTL7B	ENSG00000170439|ENST00000394252|METTL7B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3796997070312	2	626.43615	1250.85775	0.92607	0.00058012	-2.5299	-0.0015848	-1.6038	-0.0010047	626.4353195632677	105.74	0.37734	105.84	105.58	105.95	0.10284					20	9	3	0	0	0	0.17955	1	11260	11260		19.997	10.291	1	307990			31762	6589	20981	20991	36187	36187					0.2423518678419896
LLQLLVPS	8	Unmodified	_LLQLLVPS_					0	0	0			REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7875671386719	2	441.786579	881.558604	-1.2332	-0.00054481	3.5907	0.0015863	2.3575	0.0010415	441.7880163081002	41.793	3.3981	41.755	40.553	43.951	-0.038223					227	85	5	0	0	0	0.81548	1	3088	3088		20.482	0	1	13573000	+		31763	18735	20982	20992	36188	36188					0.11308733942325944
LLQLLVPS	8	Unmodified	_LLQLLVPS_					0	0	0			REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7880554199219	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.80706	2	2672	2672;2694		35.201	1.6851	1	14534000	+		31764	18735	20982	20992	36189;36190	36189					0.11308733942325944
LLQLLVPS	8	Unmodified	_LLQLLVPS_					0	0	0			REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78802490234375	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.91005	1	2340	2340		42.474	8.9589	1	12467000	+		31765	18735	20982	20992	36191	36191					0.11308733942325944
LLQLLVPS	8	Unmodified	_LLQLLVPS_					0	0	0			REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	REV__nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78729248046875	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.88915	1	2929	2929		35.201	3.2459	1	10215000	+		31766	18735	20982	20992	36192	36192					0.11308733942325944
LLQLSIQMLSD	11	Unmodified	_LLQLSIQMLSD_					0	0	0			REV__nc|ENSG00000176225|Q86VV8-3|RTTN	REV__nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	630.8493041992188	2	630.847039	1259.67952	-0.029329	-1.8502E-05	4.3944	0.0027722	4.3651	0.0027537	630.849677894081	111.25	1.2557	111.25	110.42	111.68	0					88	39	3	0	0	0	0.72739	1	11567	11567		27.047	0.3544	1	207570	+		31767	22116	20983	20993	36193	36193					0.060071488028142994
LLQLTPAS	8	Unmodified	_LLQLTPAS_					0	0	0		ENST00000337190.6_1_4:2251729-2252320:-|nuORF	ENST00000337190.6_1_4:2251729-2252320:-|nuORF	ENST00000337190.6_1_4:2251729-2252320:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.75274658203125	2	421.752736	841.490919	-1.7818	-0.0007515	-1.2969	-0.00054696	-3.0787	-0.0012985	421.7522177518738	76.828	1.8707	76.953	75.249	77.12	0.12485					132	61	3	0	0	0	0.89043	1	7194	7194		35.618	0	1	487030			31768	10185	20984	20994	36194	36194					0.06383284011519663
LLQLVLPG	8	Unmodified	_LLQLVLPG_					0	0	0		ENST00000584655.5_1_17:33353525-33416206:-|nuORF	ENST00000584655.5_1_17:33353525-33416206:-|nuORF	ENST00000584655.5_1_17:33353525-33416206:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	427.302734375	2	426.781296	851.54804	-0.18249	-7.7882E-05	-1.7725	-0.00075648	-1.955	-0.00083436	426.78143598668476	71.275	0.11238	71.309	71.258	71.37	0.034004					6	4	2	0	0	0	0.4196	1	6745	6745		20.482	7.5226	1	34411			31769	14138	20985	20995	36195	36195					0.11632751287902465
LLQLVLRYLV	10	Unmodified	_LLQLVLRYLV_					0	0	0		nc|ENSG00000051009|Q8N612-3|FHIP1B;ENSG00000051009|ENST00000449352|FHIP1B;nc|ENSG00000051009|Q8N612-2|FHIP1B	nc|ENSG00000051009|Q8N612-3|FHIP1B	nc|ENSG00000051009|Q8N612-3|FHIP1B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.403076171875	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.76	1	16.837	16.337	17.337	0.07715								0	0	0	0.45132	1	135	135		17.365	6.4994	1				31770	996	20986	20996	36196	36196					0.18548576293073893
LLQLVSAYEES	11	Unmodified	_LLQLVSAYEES_					0	0	0			REV__nc|ENSG00000135336|Q9UBD5-3|ORC3	REV__nc|ENSG00000135336|Q9UBD5-3|ORC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.328125	2	626.326993	1250.63943	-0.15906	-9.9625E-05	1.2524	0.00078442	1.0934	0.0006848	626.3277543404057	53.246	0.94266	53.242	52.744	53.687	-0.0033035					65	25	3	0	0	0	0.67762	1	4641	4641		13.454	0	1	196380	+		31771	19210	20987	20997	36197	36197					0.02413925403925532
LLQMQVWD	8	Unmodified	_LLQMQVWD_					0	0	0		nc|ENSG00000146955|A4D1S5-2|RAB19	nc|ENSG00000146955|A4D1S5-2|RAB19	nc|ENSG00000146955|A4D1S5-2|RAB19	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3137817382812	2	516.762778	1031.511	2.7864	0.0014399	-3.8622	-0.0019959	-1.0758	-0.00055595	516.7604583507526	99.53	0.20339	99.476	99.32	99.524	-0.053741					6	4	2	0	0	0	0.4196	1	10767	10767		25.45	4.5032	1	34052			31772	14978	20988	20998	36198	36198					-0.003492883201715813
LLQPKPGP	8	Unmodified	_LLQPKPGP_					0	0	0		ENSG00000163092|ENST00000409195|XIRP2;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.3054504394531	2	425.263271	848.511988	0.82173	0.00034945	-1.4252	-0.00060608	-0.60345	-0.00025662	425.2623809964476	23.55	0.47855	23.169	22.887	23.365	-0.38178					27	10	3	0	0	0	0.4196	1	1035	1035		26.796	0	1	117690			31773	5765	20989	20999	36199	36199					0.08167294111046886
LLQPLFPF	8	Unmodified	_LLQPLFPF_					0	0	0			REV__ENST00000486360.1_1_1:203045208-203045709:+|nuORF	REV__ENST00000486360.1_1_1:203045208-203045709:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7918701171875	2	487.789121	973.56369	-0.24073	-0.00011743	3.4249	0.0016706	3.1842	0.0015532	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.884	1	9860	9860		33.516	1.5607	1	1981400	+		31774	27552	20990	21000	36200	36200					0.0758503780494948
LLQPLLLSD	9	Unmodified	_LLQPLLLSD_					0	0	0			REV__ENST00000486256.5_1_7:6770271-6770355:+|nuORF	REV__ENST00000486256.5_1_7:6770271-6770355:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.30877685546875	2	506.307875	1010.6012	-0.50534	-0.00025586	2.5107	0.0012712	2.0053	0.0010153	506.3090354627433	46.385	1.2359	46.4	45.86	47.095	0.015514					46	34	2	0	0	0	0.7932	1	3393	3393		23.042	2.0956	1	163970	+		31775	27545	20991	21001	36201	36201					0.09632084279917308
LLQPPFFL	8	Unmodified	_LLQPPFFL_					0	0	0			REV__ENST00000432246.1_1_10:93557707-93557869:-|nuORF	REV__ENST00000432246.1_1_10:93557707-93557869:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7907409667969	2	487.789121	973.56369	-1.0855	-0.00052952	3.9357	0.0019198	2.8501	0.0013903	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.92774	1	7553	7553		49.211	2.4444	1	309700	+		31776	26631	20992	21002	36202	36202					0.0758503780494948
LLQPPFFL	8	Unmodified	_LLQPPFFL_					0	0	0			REV__ENST00000432246.1_1_10:93557707-93557869:-|nuORF	REV__ENST00000432246.1_1_10:93557707-93557869:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7904968261719	2	487.789121	973.56369	-0.085473	-4.1693E-05	3.1785	0.0015504	3.093	0.0015087	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.87807	1	8506	8506		31.579	7.0749	1	1889700	+		31777	26631	20992	21002	36203	36203					0.0758503780494948
LLQPPFFL	8	Unmodified	_LLQPPFFL_					0	0	0			REV__ENST00000432246.1_1_10:93557707-93557869:-|nuORF	REV__ENST00000432246.1_1_10:93557707-93557869:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7909851074219	2	487.789121	973.56369	0.54992	0.00026825	2.3468	0.0011447	2.8967	0.001413	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.87276	1	8284	8284		29.842	1.9593	1	633420	+		31778	26631	20992	21002	36204	36204					0.0758503780494948
LLQPPFFL	8	Unmodified	_LLQPPFFL_					0	0	0			REV__ENST00000432246.1_1_10:93557707-93557869:-|nuORF	REV__ENST00000432246.1_1_10:93557707-93557869:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7906799316406	2	487.789121	973.56369	-0.70733	-0.00034503	3.7306	0.0018198	3.0233	0.0014747	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.87276	2	8130	8130;8263		39.021	8.5179	1	2348200	+		31779	26631	20992	21002	36205;36206	36205					0.0758503780494948
LLQPPFFL	8	Unmodified	_LLQPPFFL_					0	0	0			REV__ENST00000432246.1_1_10:93557707-93557869:-|nuORF	REV__ENST00000432246.1_1_10:93557707-93557869:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7906799316406	2	487.789121	973.56369	0.64552	0.00031488	2.4242	0.0011825	3.0698	0.0014974	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.87807	1	8307	8307		31.579	1.0753	1	1929300	+		31780	26631	20992	21002	36207	36207					0.0758503780494948
LLQPPIRSP	9	Unmodified	_LLQPPIRSP_					0	0	0		ENSG00000121101|ENST00000349033|TEX14;nc|ENSG00000121101|Q8IWB6-2|TEX14;nc|ENSG00000121101|Q8IWB6|TEX14	ENSG00000121101|ENST00000349033|TEX14	ENSG00000121101|ENST00000349033|TEX14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2918395996094	2	510.813659	1019.61277	0.48537	0.00024793	-1.9972	-0.0010202	-1.5119	-0.00077229	510.81242257144913	78.865	0.80582	79.418	79.068	79.874	0.55246					44	18	3	0	0	0	0.20789	1	9023	9023		38.806	8.9646	1	751780			31781	3167	20993	21003	36208	36208					0.10374326093904074
LLQQKEGETW	10	Unmodified	_LLQQKEGETW_					0	0	0			REV__nc|ENSG00000145934|Q9NT68-2|TENM2;REV__nc|ENSG00000009694|Q9UKZ4-2|TENM1	REV__nc|ENSG00000009694|Q9UKZ4-2|TENM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.40234375	2	616.319502	1230.62445	0.62379	0.00038445	-2.0128	-0.0012405	-1.389	-0.00085608	616.8206167049972	21.306	0.14903	21.374	21.292	21.441	0.068251					6	4	2	0	0	0	0.37624	1	565	565		24.519	1.9395	1	20602	+		31782	19977;16149	20994	21004	36209	36209					0.018364783265724327
LLQQKLREKLD	11	Unmodified	_LLQQKLREKLD_					0	0	0		nc|ENSG00000160299|O95613-2|PCNT;ENSG00000160299|ENST00000359568|PCNT	nc|ENSG00000160299|O95613-2|PCNT	nc|ENSG00000160299|O95613-2|PCNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.9485778808594	3	461.948793	1382.82455	2.7792	0.0012839	-3.905	-0.0018039	-1.1258	-0.00052007	461.94697066502204	112.87	7.7849	112.84	112.19	119.97	-0.024811					433	277	2	0	0	0	0.75906	1	12414	12414		20.03	1.4994	1	2186600			31783	5577	20995	21005	36210	36210					0.14844952994167215
LLQQLNKEPKG	11	Unmodified	_LLQQLNKEPKG_					0	0	0		nc|ENSG00000159708|Q1X8D7-3|LRRC36;nc|ENSG00000159708|Q1X8D7-2|LRRC36;ENSG00000159708|ENST00000329956|LRRC36	nc|ENSG00000159708|Q1X8D7-3|LRRC36	nc|ENSG00000159708|Q1X8D7-3|LRRC36	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3775024414062	2	634.372069	1266.72959	6.8438	0.0043415	0.99176	0.00062915	7.8355	0.0049706	634.3726570495403	111.53	0.41818	111.58	111.29	111.71	0.046539					29	15	2	0	0	0	0.69995	1	13537	13537		31.53	7.0106	1	6115700			31784	5543	20996	21006	36211	36211					0.10689019522965282
LLQQPILQMIL	11	Unmodified	_LLQQPILQMIL_					0	0	0			REV__ENST00000601501.5_1_19:50354350-50358367:+|nuORF;REV__nc|ENSG00000104973|Q71SY5-6|MED25	REV__nc|ENSG00000104973|Q71SY5-6|MED25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2677307128906	3	437.268586	1308.78393	1.1681	0.00051075	-2.8296	-0.0012373	-1.6615	-0.00072653	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.76251	1	4488	4488		19.263	0.73163	1	4130900	+		31785	17492;17496	20997	21007	36212	36212					0.1418889535020753
LLQQPILQMIL	11	Unmodified	_LLQQPILQMIL_					0	0	0			REV__ENST00000601501.5_1_19:50354350-50358367:+|nuORF;REV__nc|ENSG00000104973|Q71SY5-6|MED25	REV__nc|ENSG00000104973|Q71SY5-6|MED25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2677917480469	3	437.268586	1308.78393	-0.53561	-0.00023421	-1.0317	-0.00045111	-1.5673	-0.00068532	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.75906	1	4140	4140		20.03	1.4994	1	4132000	+		31786	17492;17496	20997	21007	36213	36213					0.1418889535020753
LLQRAQAN	8	Unmodified	_LLQRAQAN_					0	0	0			REV__ENST00000602905.1_1_19:49651881-49653392:+|nuORF	REV__ENST00000602905.1_1_19:49651881-49653392:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2638854980469	2	457.264333	912.514114	-0.73369	-0.00033549	0.73239	0.0003349	-0.0013027	-5.9568E-07	457.26455633568185	79.517	3.0273	79.933	78.153	81.18	0.41621					150	71	3	0	0	0	0.89962	1	9099	9099		38.806	3.6054	1	894880	+		31787	22198	20998	21008	36214	36214					0.054357228488470355
LLQRSTHIATK	11	Unmodified	_LLQRSTHIATK_					0	0	0		ENSG00000169519|ENST00000407364|METTL15	ENSG00000169519|ENST00000407364|METTL15	ENSG00000169519|ENST00000407364|METTL15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3770751953125	2	634.377686	1266.74082	2.2036	0.0013979	-3.0142	-0.0019121	-0.81065	-0.00051426	634.3750780706696	111.6	0.45724	111.65	111.39	111.85	0.041832					52	15	4	0	0	0	0.69248	2	13499	13499;13507		32.751	3.5805	1	7905500			31788	6502	20999	21009	36215;36216	36215					0.11811841617145546
LLQRSTHIATK	11	Unmodified	_LLQRSTHIATK_					0	0	0		ENSG00000169519|ENST00000407364|METTL15	ENSG00000169519|ENST00000407364|METTL15	ENSG00000169519|ENST00000407364|METTL15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3761596679688	2	634.377686	1266.74082	2.2045	0.0013985	-3.4604	-0.0021952	-1.2558	-0.00079667	634.3753873618351	111.94	0.24531	111.98	111.85	112.1	0.041832					13	7	2	0	0	0	0.53361	1	13544	13544		49.536	11.725	1	525050			31789	6502	20999	21009	36217	36217					0.11811841617145546
LLQSAFRIY	9	Unmodified	_LLQSAFRIY_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.8187255859375	2	555.818941	1109.62333	0.31166	0.00017323	-0.078269	-4.3503E-05	0.2334	0.00012973	555.8189060967787	55.88	0.63483	56.439	56.025	56.659	0.55954					27	16	2	0	0	0	0.47272	1	5763	5763		53.351	1.0523	1	750370			31790	3260	21000	21010	36218	36218					0.0729030874831551
LLQSKGFF	8	Unmodified	_LLQSKGFF_					0	0	0			REV__ENSG00000196458|ENST00000360187|ZNF605	REV__ENSG00000196458|ENST00000360187|ZNF605	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.26849365234375	2	470.268553	938.522553	-0.5952	-0.00027991	0.70461	0.00033135	0.1094	5.1449E-05	470.26875072135346	74.151	2.0983	74.542	73.933	76.031	0.3911					119	51	3	0	0	0	0.91005	1	8291	8291		42.474	1.9018	1	1416400	+		31791	23135	21001	21011	36219	36219					0.050832767654810596
LLQSKGFF	8	Unmodified	_LLQSKGFF_					0	0	0			REV__ENSG00000196458|ENST00000360187|ZNF605	REV__ENSG00000196458|ENST00000360187|ZNF605	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.26837158203125	2	470.268553	938.522553	-0.59682	-0.00028066	0.69957	0.00032898	0.10275	4.8321E-05	470.2687452652717	73.919	2.2099	74.478	73.965	76.174	0.55891					143	55	4	0	0	0	0.9295	1	8423	8423		55.504	9.5523	1	1996400	+		31792	23135	21001	21011	36220	36220					0.050832767654810596
LLQTDDSAEF	10	Unmodified	_LLQTDDSAEF_					0	0	0		nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-6|API5;ENSG00000166181|ENST00000531273|API5	nc|ENSG00000166181|Q9BZZ5-3|API5	nc|ENSG00000166181|Q9BZZ5-3|API5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.7664184570312	2	569.766768	1137.51898	0.45975	0.00026195	-0.44931	-0.000256	0.010439	5.9481E-06	569.7664341566348	60.58	0.57011	60.681	60.319	60.889	0.10082					44	24	2	0	0	0	0.82886	1	5275	5275		37.812	3.639	1	542490			31793	6166	21002	21012	36221	36221					-0.04427482589699139
LLQTLRPLAWL	11	Unmodified	_LLQTLRPLAWL_					0	0	0			REV__ENST00000491910.5_1_22:24981856-24984399:-|nuORF	REV__ENST00000491910.5_1_22:24981856-24984399:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7405090332031	3	441.943091	1322.80744	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.796	1	68.925	68.425	69.425	0.12838								0	0	0	0.56276	1	6209	6209		18.531	3.1936	1		+		31794	22246	21003	21013	36222	36222					0.15895077179038708
LLQTLSKVPKA	11	Unmodified	_LLQTLSKVPKA_					0	0	0			REV__nc|ENSG00000137968|Q8NCS7|SLC44A5	REV__nc|ENSG00000137968|Q8NCS7|SLC44A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.3793334960938	2	599.381906	1196.74926	-0.54345	-0.00032574	-2.532	-0.0015176	-3.0754	-0.0018434	599.3802252506414	103.57	3.0198	103.57	103.18	106.2	-0.0035782					175	72	5	0	0	0	0.64498	1	11219	11219		39.253	7.723	1	11998000	+		31795	29879	21004	21014	36223	36223					0.15875395533748815
LLQVVPLPLFK	11	Unmodified	_LLQVVPLPLFK_					0	0	0			REV__ENST00000482694.1_1_2:85577073-85578124:-|nuORF	REV__ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.9140014648438	2	633.912842	1265.81113	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.043	1	17.089	16.589	17.589	0.0457								0	0	0	0.56276	1	215	215		19.104	1.6355	1		+		31796	16327	21005	21015	36224	36224					0.18885746952878435
LLQVVPSCV	9	Unmodified	_LLQVVPSCV_					0	0	0		ENSG00000105186|ENST00000306065|ANKRD27	ENSG00000105186|ENST00000306065|ANKRD27	ENSG00000105186|ENST00000306065|ANKRD27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27740478515625	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.78058	1	9727	9727		30.504	0	1	5642300			31797	2190	21006	21016	36225	36225					0.05648186202256511
LLQVWKKH	8	Unmodified	_LLQVWKKH_					0	0	0		ENSG00000151461|ENST00000357604|UPF2	ENSG00000151461|ENST00000357604|UPF2	ENSG00000151461|ENST00000357604|UPF2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3240966796875	2	526.324194	1050.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.546	1	54.497	53.997	54.997	-0.049271								0	0	0	0.29631	1	4521	4521		25.45	4.9683	1				31798	5118	21007	21017	36226	36226					0.11054336193410563
LLQWLLRPL	9	Unmodified	_LLQWLLRPL_					0	0	0		ENSG00000099377|ENST00000297679|HSD3B7	ENSG00000099377|ENST00000297679|HSD3B7	ENSG00000099377|ENST00000297679|HSD3B7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.3690795898438	2	576.368601	1150.72265	-1.4088	-0.00081197	2.5658	0.0014789	1.1571	0.0006669	576.3698886134715	39.563	1.8586	39.572	38.671	40.529	0.0092773					122	43	4	0	0	0	0.7932	1	2795	2795		17.365	0.89182	1	476520			31799	1761	21008	21018	36227	36227					0.15331751433086538
LLRAAPLLL	9	Unmodified	_LLRAAPLLL_					0	0	0		ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2824401855469	2	490.33677	978.658987	7.3391E-05	3.5986E-08	-1.7874	-0.0008764	-1.7873	-0.00087637	490.33607784573445	19.242	0.4885	18.612	18.358	18.847	-0.62961					12	10	2	0	0	0	0.20789	1	522	522		13.775	0.81615	1	28799			31800	1229	21009	21019	36228	36228					0.16880390995981998
LLRAAPLLL	9	Unmodified	_LLRAAPLLL_					0	0	0		ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	490.33677	978.658987	0.27047	0.00013262	-1.6368	-0.00080257	-1.3663	-0.00066995	490.3359084045521	19.068	0.37879	18.593	18.406	18.785	-0.47502	-0.0097429	1.7221E-05	NaN	8.2313	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35703			31801	1229	21009	21019							0.16880390995981998
LLRAAPLLLY	10	Unmodified	_LLRAAPLLLY_					0	0	0		ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.332275390625	2	571.868434	1141.72232	0.4975	0.0002845	-3.5068	-0.0020054	-3.0093	-0.0017209	571.8661766836524	63.917	0.14163	64.037	63.973	64.114	0.12004					8	6	2	0	0	0	0.37624	1	5610	5610		17.365	0	1	47403			31802	1229	21010	21020	36229	36229					0.15712331713234562
LLRALEPAPL	10	Unmodified	_LLRALEPAPL_					0	0	0			REV__ENSG00000185933|ENST00000329905|CALHM1	REV__ENSG00000185933|ENST00000329905|CALHM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8408813476562	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.74274	1	10750	10750		42.396	3.1433	1	44929000	+		31803	22807	21011	21021	36230	36230					0.12811168299458586
LLRALLLKHS	10	Unmodified	_LLRALLLKHS_					0	0	0		ENSG00000004939|ENST00000262418|SLC4A1;nc|ENSG00000004939|P02730-2|SLC4A1	ENSG00000004939|ENST00000262418|SLC4A1	ENSG00000004939|ENST00000262418|SLC4A1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3536376953125	2	582.384783	1162.75501	-0.28478	-0.00016585	-2.5787	-0.0015018	-2.8634	-0.0016676	582.3820484487048	103.83	0.48677	103.83	103.47	103.96	0					16	11	2	0	0	0	0.37624	1	10669	10669		19.997	5.8596	1	192550			31804	668	21012	21022	36231	36231					0.1801453883610975
LLRANRDLRW	10	Unmodified	_LLRANRDLRW_					0	0	0		ENST00000456760.1_1_9:125448634-125449186:+|nuORF	ENST00000456760.1_1_9:125448634-125449186:+|nuORF	ENST00000456760.1_1_9:125448634-125449186:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.5906677246094	3	438.258072	1311.75239	1.6079	0.00070467	-2.4566	-0.0010766	-0.84868	-0.00037194	438.2569039821351	29.892	1.3479	29.877	29.524	30.872	-0.015167					99	34	5	0	0	0	0.86931	1	1627	1627		14.086	0	1	559550			31805	11971	21013	21023	36232	36232					0.10898083431106897
LLRAQRKFRPY	11	Unmodified	_LLRAQRKFRPY_					0	0	0		ENSG00000189306|ENST00000323013|RRP7A;nc|ENSG00000291035|Q9NSQ0|RRP7BP;ENST00000357802.6_1_22:42970741-42976277:-|nuORF	ENSG00000189306|ENST00000323013|RRP7A;nc|ENSG00000291035|Q9NSQ0|RRP7BP	ENSG00000189306|ENST00000323013|RRP7A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.6460876464844	3	483.293005	1446.85719	-0.44633	-0.00021571	3.8334	0.0018527	3.3871	0.0016369	483.630350100321	45.778	0.20259	46.249	46.132	46.334	0.4714					7	4	2	0	0	0	0.18028	1	4257	4257		10.104	3.4443	1	81880			31806	8001;10395	21014	21024	36233	36233					0.15163204907685213
LLRARPPLSPP	11	Unmodified	_LLRARPPLSPP_					0	0	0			REV__ENST00000602421.5_1_1:39547131-39549904:+|nuORF	REV__ENST00000602421.5_1_1:39547131-39549904:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2579345703125	3	406.255669	1215.74518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.618	1	54.569	54.069	55.069	-0.049271								0	0	0	0.56276	1	4531	4531		17.167	5.5308	1		+		31807	29328	21015	21025	36234	36234					0.1459335083068254
LLREFATLSA	10	Unmodified	_LLREFATLSA_					0	0	0			REV__ENSG00000130508|ENST00000252804|PXDN	REV__ENSG00000130508|ENST00000252804|PXDN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8203125	2	560.821681	1119.62881	-0.54677	-0.00030664	-2.8297	-0.001587	-3.3765	-0.0018936	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.86348	1	9081	9081		31.53	5.9558	1	408930	+		31808	18878	21016	21026	36235	36235					0.07377987540144204
LLREKYYRC	9	Unmodified	_LLREKYYRC_					0	0	0			REV__nc|ENSG00000163947|Q9NR81-4|ARHGEF3	REV__nc|ENSG00000163947|Q9NR81-4|ARHGEF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3360595703125	2	622.334433	1242.65431	2.9643	0.0018448	0.18551	0.00011545	3.1498	0.0019602	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.77546	1	12278	12278		31.955	4.0726	1	435720	+		31809	21002	21017	21027	36236	36236					0.042691387909144396
LLRENKESA	9	Unmodified	_LLRENKESA_					0	0	0			REV__ENSG00000136770|ENST00000376980|DNAJC1	REV__ENSG00000136770|ENST00000376980|DNAJC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2933349609375	2	530.293288	1058.57202	-1.5163	-0.00080409	1.7205	0.00091237	0.2042	0.00010828	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.78058	1	9156	9156		30.504	0.18592	1	1686700	+		31810	19333	21018	21028	36237	36237					0.04507939983614051
LLREPLSASF	10	Unmodified	_LLREPLSASF_					0	0	0			REV__ENST00000397002.6_1_14:24550209-24550419:-|nuORF	REV__ENST00000397002.6_1_14:24550209-24550419:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.8046875	2	566.821681	1131.62881	0.11819	6.6994E-05	-0.20215	-0.00011458	-0.083954	-4.7587E-05	566.8214933597314	75.389	2.096	75.784	75.037	77.133	0.39507					140	52	5	0	0	0	0.37624	1	8460	8460		32.812	9.7699	1	6535600	+		31811	26155	21019	21029	36238	36238					0.06825987540150891
LLREQVLHPL	10	Unmodified	_LLREQVLHPL_					0	0	0			REV__ENST00000513693.1_1_5:7690761-7690995:+|nuORF	REV__ENST00000513693.1_1_5:7690761-7690995:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2498474121094	3	406.583674	1216.72919	3.1806	0.0012932	-2.547	-0.0010356	0.6336	0.00025761	406.5823777958884	112.82	1.2516	112.85	112.71	113.96	0.028854					79	33	3	0	0	0	0.8486	1	12446	12446		18.262	3.5684	1	2434900	+		31812	27997	21020	21030	36239	36239					0.12949644593800258
LLRFIGDQSCT	11	Unmodified	_LLRFIGDQSCT_					0	0	0		nc|ENSG00000165288|Q6RI45-5|BRWD3;ENSG00000165288|ENST00000373275|BRWD3;ENST00000473691.1_1_X:79938122-79975072:-|nuORF;nc|ENSG00000165288|Q6RI45-3|BRWD3;nc|ENSG00000165288|Q6RI45-4|BRWD3;nc|ENSG00000165288|Q6RI45-2|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3796997070312	2	626.821355	1251.62816	-1.2022	-0.00075356	0.17625	0.00011048	-1.0259	-0.00064308	626.8206953477965	105.91	0.12114	105.98	105.92	106.04	0.073112					4	2	2	0	0	0	0.17385	1	11246	11246		19.104	0	1	55566			31813	6069	21021	21031	36240	36240					0.012408248287783863
LLRFQLSQFG	10	Unmodified	_LLRFQLSQFG_					0	0	0			REV__ENSG00000151790|ENST00000536354|TDO2	REV__ENSG00000151790|ENST00000536354|TDO2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3665161132812	2	604.842948	1207.67134	0.90465	0.00054717	0.3979	0.00024067	1.3026	0.00078784	604.8428936656351	104.54	0.68127	104.65	104.48	105.16	0.11685					25	16	2	0	0	0	0.37624	1	11134	11134		32.812	15.344	1	297980	+		31814	20270	21022	21032	36241	36241					0.07581382668354308
LLRGKWLEDS	10	Unmodified	_LLRGKWLEDS_					0	0	0			REV__ENSG00000184574|ENST00000329858|LPAR5	REV__ENSG00000184574|ENST00000329858|LPAR5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.8370361328125	2	608.837862	1215.66117	0.09385	5.714E-05	-1.5088	-0.00091863	-1.415	-0.00086149	608.836828431824	110.46	1.0631	110.5	110.23	111.29	0.031738					103	33	4	0	0	0	0.85694	1	12077	12077		21.96	1.013	1	3714300	+		31815	22693	21023	21033	36242	36242					0.061967749431460106
LLRGLLWGLAL	11	Unmodified	_LLRGLLWGLAL_					0	0	0			REV__ENSG00000187492|ENST00000412678|CDHR4	REV__ENSG00000187492|ENST00000412678|CDHR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.93359375	3	408.932414	1223.77541	0.012698	5.1924E-06	3.8175	0.0015611	3.8302	0.0015663	408.933961832912	16.242	0.73024	16.301	16.127	16.857	0.059269					78	32	4	0	0	0	0.73621	1	136	136		25.126	3.4402	1	1215700	+		31816	22917	21024	21034	36243	36243					0.1724770949588219
LLRGRRAPPS	10	Unmodified	_LLRGRRAPPS_					0	0	0		ENST00000298310.9_1_14:50319457-50319715:-|nuORF	ENST00000298310.9_1_14:50319457-50319715:-|nuORF	ENST00000298310.9_1_14:50319457-50319715:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.8455200195312	2	561.846356	1121.67816	-0.47673	-0.00026785	-0.54208	-0.00030457	-1.0188	-0.00057241	561.8459227560618	97.238	1.868	97.238	96.81	98.678	0					92	44	4	0	0	0	0.86348	1	9763	9763		31.53	1.2121	1	643900			31817	9771	21025	21035	36244	36244					0.12218740339585565
LLRHPALP	8	Unmodified	_LLRHPALP_					0	0	0		ENST00000460788.5_1_2:241654462-241654690:-|nuORF	ENST00000460788.5_1_2:241654462-241654690:-|nuORF	ENST00000460788.5_1_2:241654462-241654690:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7873229980469	2	458.789987	915.565421	-1.1207	-0.00051419	-4.3163	-0.0019803	-5.437	-0.0024945	458.7879776925229	92.908	3.5156	93.134	92.238	95.754	0.22548					221	84	5	0	0	0	0.89457	1	9402	9402		37.028	0	1	15931000			31818	12013	21026	21036	36245	36245					0.10426091613555855
LLRHPALP	8	Unmodified	_LLRHPALP_					0	0	0		ENST00000460788.5_1_2:241654462-241654690:-|nuORF	ENST00000460788.5_1_2:241654462-241654690:-|nuORF	ENST00000460788.5_1_2:241654462-241654690:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.78741455078125	2	458.789987	915.565421	-1.7492	-0.00080251	-3.6197	-0.0016607	-5.3689	-0.0024632	458.7883137610394	92.976	2.4972	93.168	92.52	95.017	0.19239					169	59	5	0	0	0	0.87276	2	9351	9351;9399		29.842	4.3914	1	11606000			31819	12013	21026	21036	36246;36247	36246					0.10426091613555855
LLRHPALP	8	Unmodified	_LLRHPALP_					0	0	0		ENST00000460788.5_1_2:241654462-241654690:-|nuORF	ENST00000460788.5_1_2:241654462-241654690:-|nuORF	ENST00000460788.5_1_2:241654462-241654690:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.78790283203125	2	458.789987	915.565421	-0.56463	-0.00025905	-4.2378	-0.0019443	-4.8024	-0.0022033	458.7879697200244	92.862	1.6326	93.312	92.732	94.365	0.44989					129	38	4	0	0	0	0.87276	1	11051	11051		29.842	0	1	6441800			31820	12013	21026	21036	36248	36248					0.10426091613555855
LLRHSANPL	9	Unmodified	_LLRHSANPL_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;ENST00000583043.5_1_18:67684852-67806940:-|nuORF	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.31011962890625	2	510.801083	1019.58761	-1.2704	-0.00064891	-2.0787	-0.0010618	-3.3491	-0.0017107	511.30218246247694	79.227	0.28773	79.325	79.178	79.466	0.098694					12	8	2	0	0	0	0.20789	1	7468	7468		10.265	0	1	28615			31821	7065	21027	21037	36249	36249					0.07860271291315257
LLRIEPFTT	9	Unmodified	_LLRIEPFTT_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA;ENST00000503716.5_1_4:151186876-151502511:-|nuORF	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3178100585938	2	545.318774	1088.623	-0.48451	-0.00026421	-2.7474	-0.0014982	-3.2319	-0.0017624	545.3171179586028	102.77	0.68293	102.77	102.35	103.04	0					47	16	4	0	0	0	0.78058	1	10513	10513		30.504	0	1	631100			31822	8292	21028	21038	36250	36250					0.08222889028456848
LLRIRQGDLLV	11	Unmodified	_LLRIRQGDLLV_					0	0	0		ENST00000482704.1_1_2:96689607-96690664:-|nuORF;ENST00000471757.5_1_2:96687909-96690664:-|nuORF;nc|ENSG00000186281|Q6NUI2-5|GPAT2;nc|ENSG00000186281|Q6NUI2-3|GPAT2;ENST00000486463.5_1_2:96687909-96693504:-|nuORF;ENST00000484440.5_1_2:96688852-96698107:-|nuORF;nc|ENSG00000186281|Q6NUI2|GPAT2;ENSG00000186281|ENST00000434632|GPAT2	ENST00000482704.1_1_2:96689607-96690664:-|nuORF	ENST00000482704.1_1_2:96689607-96690664:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.59783935546875	3	432.610111	1294.8085	-1.5711	-0.00067966	-1.7699	-0.00076568	-3.341	-0.0014453	432.61035143033314	107.41	0.33622	107.55	107.36	107.69	0.13866					14	7	3	0	0	0	0.17863	1	11534	11534		14.086	5.6788	1	88633			31823	7789	21029	21039	36251	36251					0.17289291547922403
LLRKAPGG	8	Unmodified	_LLRKAPGG_					0	0	0		nc|ENSG00000142675|Q969H4|CNKSR1;ENSG00000142675|ENST00000361530|CNKSR1	nc|ENSG00000142675|Q969H4|CNKSR1	nc|ENSG00000142675|Q969H4|CNKSR1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.248291015625	2	406.261062	810.507572	-1.8143	-0.00073709	0.5697	0.00023145	-1.2446	-0.00050565	406.2611420773903	88.044	0.46704	88.245	87.8	88.267	0.20114					14	10	2	0	0	0	0.4196	1	8694	8694		20.482	0	1	213170			31824	4580	21030	21040	36252	36252					0.09473829688135993
LLRKATALPAR	11	Unmodified	_LLRKATALPAR_					0	0	0		ENST00000595288.5_1_19:7687207-7690948:-|nuORF;ENSG00000076924|ENST00000358368|XAB2	ENST00000595288.5_1_19:7687207-7690948:-|nuORF	ENST00000595288.5_1_19:7687207-7690948:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.92950439453125	3	403.931185	1208.77173	0.25098	0.00010138	-4.1453	-0.0016744	-3.8943	-0.001573	403.92942319004646	47.073	4.6899	47.112	45.811	50.501	0.038181					268	130	4	0	0	0	0.75544	1	3450	3450		18.966	3.6332	1	2178500			31825	1368	21031	21041	36253	36253					0.17569039722025082
LLRKGQEN	8	Unmodified	_LLRKGQEN_					0	0	0		ENST00000528614.1_1_11:111285201-111285411:-|nuORF	ENST00000528614.1_1_11:111285201-111285411:-|nuORF	ENST00000528614.1_1_11:111285201-111285411:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2774963378906	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.86288	1	8141	8141		26.796	0	1	1929800			31826	13304	21032	21042	36254	36254					0.060319920203255606
LLRKGQEN	8	Unmodified	_LLRKGQEN_					0	0	0		ENST00000528614.1_1_11:111285201-111285411:-|nuORF	ENST00000528614.1_1_11:111285201-111285411:-|nuORF	ENST00000528614.1_1_11:111285201-111285411:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2773742675781	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.884	1	7891	7891		33.516	0.70317	1	2142700			31827	13304	21032	21042	36255	36255					0.060319920203255606
LLRKGQEN	8	Unmodified	_LLRKGQEN_					0	0	0		ENST00000528614.1_1_11:111285201-111285411:-|nuORF	ENST00000528614.1_1_11:111285201-111285411:-|nuORF	ENST00000528614.1_1_11:111285201-111285411:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27728271484375	2	479.277441	956.540328	0.28639	0.00013726	-0.32449	-0.00015552	-0.038098	-1.826E-05	479.27712266759204	81.87	2.8073	82.296	80.642	83.45	0.42646					178	68	3	0	0	0	0.92457	1	9473	9473		47.916	1.9434	1	1790000			31828	13304	21032	21042	36256	36256					0.060319920203255606
LLRKIAGV	8	Unmodified	_LLRKIAGV_					0	0	0		ENSG00000103184|ENST00000251170|SEC14L5	ENSG00000103184|ENST00000251170|SEC14L5	ENSG00000103184|ENST00000251170|SEC14L5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3001708984375	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82464	1	8467	8467		21.702	1.2205	1	5485100			31829	2060	21033	21043	36257	36257					0.14627262273370434
LLRKIDPEINI	11	Unmodified	_LLRKIDPEINI_					0	0	0			REV__ENSG00000176153|ENST00000389614|GPX2	REV__ENSG00000176153|ENST00000389614|GPX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2727355957031	3	441.938005	1322.79219	0.63201	0.00027931	3.4772	0.0015367	4.1093	0.001816	441.93938161315157	55.264	1.2271	55.292	54.682	55.909	0.027142					77	31	3	0	0	0	0.75457	1	4916	4916		21.032	3.1991	1	422510	+		31830	22112	21034	21044	36258	36258					0.1437016559118547
LLRKQCRIRH	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLRKQCRIRH_					1	0	0		chr2:162293668-162310765|21|23.14|0.18|6.99|-|1|IFIH1,IFIH1|2	chr2:162293668-162310765|21|23.14|0.18|6.99|-|1|IFIH1,IFIH1|2	chr2:162293668-162310765|21|23.14|0.18|6.99|-|1|IFIH1,IFIH1|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6084289550781	3	455.606707	1363.79829	-0.22489	-0.00010246	4.0269	0.0018347	3.802	0.0017322	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.66675	2	7466	7466;7622		46.457	17.88	1	1863900			31831	309	21035	21045	36259;36260	36259					0.13094405341712445
LLRKREWTIGR	11	Unmodified	_LLRKREWTIGR_					0	0	0		ENST00000535181.5_1_12:133448808-133463914:-|nuORF;ENST00000536196.1_1_12:133448709-133463914:-|nuORF;nc|ENSG00000072609|Q96EP1-5|CHFR;nc|ENSG00000072609|Q96EP1-3|CHFR;ENSG00000072609|ENST00000450056|CHFR;nc|ENSG00000072609|Q96EP1-4|CHFR;nc|ENSG00000072609|Q96EP1|CHFR	ENST00000535181.5_1_12:133448808-133463914:-|nuORF	ENST00000535181.5_1_12:133448808-133463914:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6236267089844	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.7896	1	12186	12186		13.508	0.55046	1	2577100			31832	1279	21036	21046	36261	36261					0.15574901045056322
LLRKRNFYKKL	11	Unmodified	_LLRKRNFYKKL_					0	0	0		ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3192443847656	3	493.648789	1477.92454	-0.87644	-0.00043265	2.6394	0.0013029	1.7629	0.00087027	493.64998188310005	44.669	3.6346	44.636	43.623	47.257	-0.033474					240	86	4	0	0	0	0.80593	2	3490	3490;3570		10.104	4.1029	1	495450			31833	1860	21037	21047	36262;36263	36262					0.2046923511861678
LLRKRNFYKKL	11	Unmodified	_LLRKRNFYKKL_					0	0	0		ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.6492919921875	3	493.648789	1477.92454	-2.0219	-0.0009981	3.5054	0.0017304	1.4835	0.00073234	493.6504107120104	44.606	1.8952	44.602	43.855	45.75	-0.0041618					105	44	3	0	0	0	0.84494	1	3457	3457		6.3209	0.31984	1	507660			31834	1860	21037	21047	36264	36264					0.2046923511861678
LLRKRNFYKKL	11	Unmodified	_LLRKRNFYKKL_					0	0	0		ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.6452941894531	3	493.648789	1477.92454	0.28936	0.00014284	1.4809	0.00073102	1.7702	0.00087386	493.6493656295497	44.418	1.6555	44.467	43.631	45.286	0.048996					106	39	4	0	0	0	0.76251	1	3058	3058		19.263	5.7547	1	509790			31835	1860	21037	21047	36265	36265					0.2046923511861678
LLRKRNFYKKL	11	Unmodified	_LLRKRNFYKKL_					0	0	0		ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.6491394042969	3	493.648789	1477.92454	-0.090194	-4.4524E-05	1.9089	0.00094235	1.8187	0.00089782	493.64966914482096	44.463	1.6429	44.405	43.685	45.328	-0.058258					115	39	4	0	0	0	0.76579	1	3137	3137		18.531	12.21	1	603320			31836	1860	21037	21047	36266	36266					0.2046923511861678
LLRKRNFYKKL	11	Unmodified	_LLRKRNFYKKL_					0	0	0		ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	493.648789	1477.92454	-1.1323	-0.00055894	1.6843	0.00083148	0.55208	0.00027253	493.64940402367904	43.955	1.3752	44.406	43.477	44.853	0.45025	-0.094156	-0.00095924	NaN	19.263	106	33	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	882390			31837	1860	21037	21047							0.2046923511861678
LLRKRQAAAPW	11	Unmodified	_LLRKRQAAAPW_					0	0	0			REV__ENSG00000153976|ENST00000284110|HS3ST3A1	REV__ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2671813964844	3	437.266568	1308.77787	-0.68964	-0.00030156	3.497	0.0015291	2.8073	0.0012275	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.75906	1	4866	4866		20.03	1.4994	1	2651700	+		31838	20364	21038	21048	36267	36267					0.13583557953529635
LLRKTANALRP	11	Unmodified	_LLRKTANALRP_					0	0	0			REV__ENSG00000221963|ENST00000409652|APOL6	REV__ENSG00000221963|ENST00000409652|APOL6	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.2652587890625	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.857	1	48.894	48.394	49.394	0.037731								0	0	0	0.56276	1	3748	3748		23.378	3.3474	1		+		31839	23720	21039	21049	36268	36268					0.1617213823367365
LLRKTKSS	8	Unmodified	_LLRKTKSS_					0	0	0		ENST00000324460.6_1_9:127999118-127999232:-|nuORF	ENST00000324460.6_1_9:127999118-127999232:-|nuORF	ENST00000324460.6_1_9:127999118-127999232:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.79766845703125	2	466.798009	931.581465	-0.33021	-0.00015414	-0.38243	-0.00017852	-0.71264	-0.00033266	466.7976705167877	19.101	1.2721	19.028	18.843	20.115	-0.073704					70	37	3	0	0	0	0.86906	1	404	404		8.2313	0	1	201130			31840	10062	21040	21050	36269	36269					0.11293753059794653
LLRLEATG	8	Unmodified	_LLRLEATG_					0	0	0		ENST00000456404.5_1_20:30310076-30311747:-|nuORF	ENST00000456404.5_1_20:30310076-30311747:-|nuORF	ENST00000456404.5_1_20:30310076-30311747:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7749328613281	2	436.763635	871.512717	-0.16249	-7.0972E-05	1.2553	0.00054827	1.0928	0.0004773	436.76406557976367	90.744	0.20488	90.814	90.64	90.844	0.069328					7	4	2	0	0	0	0.4196	1	9288	9288		37.159	6.6555	1	49339			31841	11968	21041	21051	36270	36270					0.07182088760077932
LLRLEATG	8	Unmodified	_LLRLEATG_					0	0	0		ENST00000456404.5_1_20:30310076-30311747:-|nuORF	ENST00000456404.5_1_20:30310076-30311747:-|nuORF	ENST00000456404.5_1_20:30310076-30311747:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77490234375	2	436.763635	871.512717	-1.5133	-0.00066094	-1.0234	-0.00044698	-2.5367	-0.0011079	436.7628966370653	90.747	0.27245	90.964	90.826	91.099	0.21736					9	6	2	0	0	0	0.4196	1	9125	9125		25.45	0	1	125390			31842	11968	21041	21051	36271	36271					0.07182088760077932
LLRLHRRR	8	Unmodified	_LLRLHRRR_					0	0	0			REV__ENST00000487330.1_1_9:74975472-74979818:-|nuORF	REV__ENST00000487330.1_1_9:74975472-74979818:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402709960938	2	560.370333	1118.72611	-1.4184	-0.00079483	-3.7004	-0.0020736	-5.1188	-0.0028684	560.3664513804689	102.22	0.5994	102.35	101.93	102.53	0.1357					28	14	3	0	0	0	0.4196	1	10641	10641		19.36	0	1	641780	+		31843	25850	21042	21052	36272	36272					0.1714985905030062
LLRLKTTKYSS	11	Unmodified	_LLRLKTTKYSS_					0	0	0		chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.267822265625	3	437.266122	1308.77654	1.2133	0.00053055	2.749	0.001202	3.9623	0.0017326	437.2672396896614	50.554	1.7579	50.562	49.504	51.262	0.0077477					187	47	5	0	0	0	0.75457	1	4378	4378		21.032	0	1	3327600			31844	387	21043	21053	36273	36273					0.13449879074119053
LLRLKTTKYSS	11	Unmodified	_LLRLKTTKYSS_					0	0	0		chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.6024169921875	3	437.266122	1308.77654	1.089	0.00047619	2.708	0.0011841	3.797	0.0016603	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.73647	1	4853	4853		25.068	5.8051	1	2745300			31845	387	21043	21053	36274	36274					0.13449879074119053
LLRLKTTKYSS	11	Unmodified	_LLRLKTTKYSS_					0	0	0		chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.266845703125	3	437.266122	1308.77654	0.31383	0.00013723	3.5644	0.0015586	3.8783	0.0016958	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.72374	1	4453	4453		27.644	9.1129	1	2521600			31846	387	21043	21053	36275	36275					0.13449879074119053
LLRLKTTKYSS	11	Unmodified	_LLRLKTTKYSS_					0	0	0		chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	chr3:113008395-113010643|13|12.62|0.53|4.58|-|1|None,NEPRO|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2681579589844	3	437.266122	1308.77654	0.02954	1.2917E-05	3.8504	0.0016837	3.88	0.0016966	437.26770833059527	48.1	1.3181	49.023	48.466	49.784	0.92315					115	32	4	0	0	0	0.75457	2	4695	4695;4708		21.032	2.5012	1	3276900			31847	387	21043	21053	36276;36277	36276					0.13449879074119053
LLRLKWRLHK	10	Unmodified	_LLRLKWRLHK_					0	0	0			REV__ENST00000342992.10_3_2:179396097-179396157:-|nuORF	REV__ENST00000342992.10_3_2:179396097-179396157:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.9652404785156	3	454.966341	1361.87719	-2.4763	-0.0011267	2.2637	0.0010299	-0.2126	-9.6724E-05	454.9672822128271	40.296	0.82854	40.688	40.337	41.165	0.39209					69	22	4	0	0	0	0.888	1	3467	3467		11.097	0.99287	1	12658000	+		31848	25283	21044	21054	36278	36278					0.2107300063828461
LLRLLACA	8	Unmodified	_LLRLLACA_					0	0	0			REV__nc|ENSG00000139637|Q9HB07|MYG1	REV__nc|ENSG00000139637|Q9HB07|MYG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7716979980469	2	436.772948	871.531344	0.37686	0.0001646	1.37	0.00059837	1.7468	0.00076298	436.77341022193644	26.318	0.4133	26.346	26.113	26.526	0.02817					33	18	2	0	0	0	0.80963	1	982	982		15.636	6.1657	1	141420	+		31849	19557	21045	21055	36279	36279					0.09043927130278462
LLRLLACA	8	Unmodified	_LLRLLACA_					0	0	0			REV__nc|ENSG00000139637|Q9HB07|MYG1	REV__nc|ENSG00000139637|Q9HB07|MYG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.7740478515625	2	436.772948	871.531344	1.4261	0.00062287	0.087506	3.822E-05	1.5136	0.00066109	436.7729940973578	27.77	1.2677	27.515	27.282	28.55	-0.25465					51	30	3	0	0	0	0.80963	1	1679	1679		15.636	0	1	1148800	+		31850	19557	21045	21055	36280	36280					0.09043927130278462
LLRLPCPSK	9	Unmodified	_LLRLPCPSK_					0	0	0			REV__ENST00000449537.1_1_7:26438397-26438930:+|nuORF	REV__ENST00000449537.1_1_7:26438397-26438930:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8085327148438	2	513.810062	1025.60557	-0.38547	-0.00019806	-1.5611	-0.00080208	-1.9465	-0.0010001	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.76255	2	3863	3831;3863		35.618	1.2474	1	1377600	+		31851	26853	21046	21056	36281;36282	36282					0.09379270221802471
LLRLPFPVIL	10	Unmodified	_LLRLPFPVIL_					0	0	0			REV__nc|ENSG00000134909|A7KAX9-3|ARHGAP32	REV__nc|ENSG00000134909|A7KAX9-3|ARHGAP32	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8667602539062	2	590.894452	1179.77435	-1.319	-0.00077941	2.0451	0.0012085	0.72611	0.00042905	590.8955299627406	103.73	0.27964	103.85	103.69	103.97	0.11494					8	6	3	0	0	0	0.37624	1	10932	10932		17.365	0	1	104350	+		31852	29860	21047	21057	36283	36283					0.19165495126981114
LLRLPQKV	8	Unmodified	_LLRLPQKV_					0	0	0		nc|ENSG00000182240|Q9Y5Z0-3|BACE2;nc|ENSG00000182240|Q9Y5Z0-2|BACE2;ENSG00000182240|ENST00000330333|BACE2;ENST00000491838.5_1_21:42598231-42618026:+|nuORF;nc|ENSG00000182240|Q9Y5Z0-5|BACE2;nc|ENSG00000182240|Q9Y5Z0-4|BACE2;ENST00000463674.5_1_21:42613685-42647548:+|nuORF	nc|ENSG00000182240|Q9Y5Z0-3|BACE2	nc|ENSG00000182240|Q9Y5Z0-3|BACE2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.8282165527344	2	483.826569	965.638586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.17	1	15.571	15.071	16.071	-0.59873								0	0	0	0.29498	1	97	97		26.796	0	1				31853	7438	21048	21058	36284	36284					0.1543922033616809
LLRLRLRLR	9	Unmodified	_LLRLRLRLR_					0	0	0		ENST00000234111.8_1_2:10588250-10588409:-|nuORF	ENST00000234111.8_1_2:10588250-10588409:-|nuORF	ENST00000234111.8_1_2:10588250-10588409:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3663330078125	2	604.924941	1207.83533	1.0531	0.00063704	-2.4774	-0.0014986	-1.4243	-0.00086161	604.9233340561302	104.71	0.24197	104.88	104.69	104.93	0.17095					8	5	2	0	0	0	0.20789	1	11130	11130		3.6843	0	1	55541			31854	9226	21049	21059	36285	36285					0.2397244494975439
LLRLRPGHN	9	Unmodified	_LLRLRPGHN_					0	0	0			REV__ENST00000582478.5_1_17:80008786-80009642:-|nuORF	REV__ENST00000582478.5_1_17:80008786-80009642:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.32666015625	2	538.327799	1074.64105	1.3454	0.00072427	-3.0293	-0.0016307	-1.6839	-0.00090648	538.3260218082069	100.6	2.6544	100.9	100.26	102.91	0.2999					222	70	6	0	0	0	0.7932	1	12128	12128		24.203	2.5004	1	18713000	+		31855	21598	21050	21060	36286	36286					0.10671068793840277
LLRLTLLWLQ	10	Unmodified	_LLRLTLLWLQ_					0	0	0			REV__ENSG00000234409|ENST00000439765|CCDC188	REV__ENSG00000234409|ENST00000439765|CCDC188	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3764038085938	2	634.908091	1267.80163	-1.1759	-0.0007466	-0.092846	-5.8949E-05	-1.2688	-0.00080555	634.9080336474287	111.98	0.34179	111.96	111.88	112.22	-0.019882					20	11	2	0	0	0	0.37624	1	11927	11927		20.947	6.0821	1	783610	+		31856	23778	21051	21061	36287	36287					0.17843978667360716
LLRMWRPLGVL	11	Unmodified	_LLRMWRPLGVL_					0	0	0			REV__chr11:32586872-32587012|14|129.36|0.21|9.3|+|1|None,EIF3M|1	REV__chr11:32586872-32587012|14|129.36|0.21|9.3|+|1|None,EIF3M|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9432373046875	3	451.944437	1352.81148	-1.6861	-0.00076203	-0.97117	-0.00043892	-2.6573	-0.0012009	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.76579	1	4412	4412		18.531	0.69791	1	792670	+		31857	15494	21052	21062	36288	36288					0.149188434010739
LLRNHVNTH	9	Unmodified	_LLRNHVNTH_					0	0	0		nc|ENSG00000124092|Q8NI51-9|CTCFL;nc|ENSG00000124092|Q8NI51-11|CTCFL;nc|ENSG00000124092|Q8NI51-6|CTCFL;nc|ENSG00000124092|Q8NI51-5|CTCFL;nc|ENSG00000124092|Q8NI51-10|CTCFL;nc|ENSG00000124092|Q8NI51-2|CTCFL;nc|ENSG00000124092|Q8NI51-8|CTCFL;ENSG00000124092|ENST00000243914|CTCFL;nc|ENSG00000124092|Q8NI51-3|CTCFL;nc|ENSG00000124092|Q8NI51-7|CTCFL;chr20:57518891-57519207|21|14.67|0.31|5.57|-|2|CTCFL,CTCFL|1;nc|ENSG00000124092|Q8NI51-4|CTCFL	nc|ENSG00000124092|Q8NI51-9|CTCFL	nc|ENSG00000124092|Q8NI51-9|CTCFL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3059692382812	2	552.307064	1102.59957	2.2801	0.0012593	-3.3671	-0.0018597	-1.087	-0.00060038	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.76255	1	9824	9824		35.618	0	1	1797400			31858	14886	21053	21063	36289	36289					0.052378880345031575
LLRPARVQA	9	Unmodified	_LLRPARVQA_					0	0	0			REV__nc|ENSG00000123572|Q7Z2Y5-2|NRK	REV__nc|ENSG00000123572|Q7Z2Y5-2|NRK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.3262939453125	2	512.324725	1022.6349	0.39641	0.00020309	-0.71681	-0.00036724	-0.3204	-0.00016415	512.3242771059046	21.552	0.81508	20.923	20.462	21.277	-0.62834					33	20	2	0	0	0	0.74721	1	771	771		37.159	10.466	1	114470	+		31859	18546	21054	21064	36290	36290					0.12448550562316996
LLRPDAAS	8	Unmodified	_LLRPDAAS_					0	0	0		ENST00000342245.8_1_11:6416094-6416202:+|nuORF	ENST00000342245.8_1_11:6416094-6416202:+|nuORF	ENST00000342245.8_1_11:6416094-6416202:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7403869628906	2	421.74016	841.465767	2.0413	0.0008609	2.0323	0.00085709	4.0736	0.001718	421.74101918086046	73.852	0.63034	73.896	73.702	74.332	0.043648					46	28	2	0	0	0	0.91472	1	7120	7120		44.117	3.5442	1	150240			31860	10257	21055	21065	36291	36291					0.03869229208942215
LLRPKQLSLAF	11	Unmodified	_LLRPKQLSLAF_					0	0	0			REV__CON__P01030	REV__CON__P01030	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4058837890625	2	643.403173	1284.79179	1.6039	0.001032	2.8597	0.0018399	4.4636	0.0028719	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.6921	1	11228	11228		32.812	7.2384	1	21138000	+	+	31861	15959	21056	21066	36292	36292					0.16078790662004394
LLRPLAGC	8	Unmodified	_LLRPLAGC_					0	0	0		ENST00000422377.5_1_6:111804278-111804845:-|nuORF	ENST00000422377.5_1_6:111804278-111804845:-|nuORF	ENST00000422377.5_1_6:111804278-111804845:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75164794921875	2	421.749473	841.484393	2.0737	0.00087458	2.8713	0.001211	4.945	0.0020855	421.75059831811666	74.567	1.1366	74.612	73.884	75.021	0.04509					66	40	2	0	0	0	0.80963	1	7202	7202		15.636	0.97212	1	116630			31862	11481	21057	21067	36293	36293					0.05731067579142746
LLRPLASRPRM	11	Unmodified	_LLRPLASRPRM_					0	0	0			REV__ENSG00000180340|ENST00000315323|FZD2	REV__ENSG00000180340|ENST00000315323|FZD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2674255371094	3	437.267691	1308.78124	1.089	0.00047619	-0.88113	-0.00038529	0.20788	9.0897E-05	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.70584	1	4691	4691		30.569	7.191	1	2745300	+		31863	22391	21058	21068	36294	36294					0.13920484735876926
LLRPLLELL	9	Unmodified	_LLRPLLELL_					0	0	0			REV__ENST00000572438.1_1_17:4802033-4804946:-|nuORF	REV__ENST00000572438.1_1_17:4802033-4804946:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.3642578125	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.614	1	44.663	44.163	45.163	0.048996								0	0	0	0.33301	1	3159	3159		19.36	1.995	1		+		31864	17718	21059	21069	36295	36295					0.17520929338934366
LLRPLLKQCVL	11	Unmodified	_LLRPLLKQCVL_					0	0	0			REV__ENSG00000147113|ENST00000398000|DIPK2B	REV__ENSG00000147113|ENST00000398000|DIPK2B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3924560546875	2	648.415226	1294.8159	1.6039	0.00104	-3.3689	-0.0021844	-1.765	-0.0011444	648.9135039513753	106.78	0.47246	106.93	106.52	106.99	0.14843					15	10	3	0	0	0	0.1725	1	11388	11388		20.947	0.95016	1	215560	+		31865	20050	21060	21070	36296	36296					0.18028307823988143
LLRPPEPLP	9	Unmodified	_LLRPPEPLP_					0	0	0		ENSG00000139540|ENST00000454355|SLC39A5	ENSG00000139540|ENST00000454355|SLC39A5	ENSG00000139540|ENST00000454355|SLC39A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3139038085938	2	516.316035	1030.61752	-1.5619	-0.00080642	-1.9373	-0.0010003	-3.4992	-0.0018067	516.3149076737526	113.19	0.20975	113.16	113.01	113.22	-0.032333					8	5	2	0	0	0	0.7932	1	12079	12079		25.45	0	1	2617000			31866	4376	21061	21071	36297	36297					0.10343210236646883
LLRPQVALTV	10	Unmodified	_LLRPQVALTV_					0	0	0			REV__ENSG00000095564|ENST00000265990|BTAF1	REV__ENSG00000095564|ENST00000265990|BTAF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.3534545898438	2	555.355691	1108.69683	-0.45068	-0.00025029	-3.7051	-0.0020576	-4.1558	-0.0023079	555.3535032243398	101.3	2.2254	101.3	100.77	103	0					164	54	4	0	0	0	0.85694	1	10336	10336		21.96	1.013	1	2945100	+		31867	17061	21062	21072	36298	36298					0.14682857190769028
LLRPRGTG	8	Unmodified	_LLRPRGTG_					0	0	0			REV__ENST00000253496.3_1_5:176831288-176831529:-|nuORF	REV__ENST00000253496.3_1_5:176831288-176831529:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2515869140625	2	435.269419	868.524284	0.53839	0.00023435	-4.07	-0.0017716	-3.5316	-0.0015372	435.2683763608046	78.821	0.25279	78.96	78.832	79.085	0.13884					9	6	2	0	0	0	0.4196	1	7470	7470		31.955	18.996	1	21395	+		31868	24305	21063	21073	36299	36299					0.08476330574103486
LLRPRPGWRG	10	Unmodified	_LLRPRPGWRG_					0	0	0			REV__ENST00000476941.5_1_3:142442973-142443402:+|nuORF	REV__ENST00000476941.5_1_3:142442973-142443402:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.368896484375	2	604.362173	1206.70979	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.65	1	114.62	114.12	115.12	-0.024452								0	0	0	0.45132	1	12706	12706		15.642	0	1		+		31869	27345	21064	21074	36300	36300					0.11470733093551644
LLRPTSIR	8	Unmodified	_LLRPTSIR_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.3051452636719	2	478.306001	954.597449	1.1239	0.00053757	-1.4254	-0.00068176	-0.30146	-0.00014419	478.30517389078557	17.535	0.47468	17.052	16.898	17.373	-0.48256					20	10	3	0	0	0	0.93786	1	280	280		53.351	5.3919	1	317000			31870	15003;5274	21065	21075	36301	36301					0.11833459296713045
LLRQAVLRQL	10	Unmodified	_LLRQAVLRQL_					0	0	0		ENSG00000160951|ENST00000292513|PTGER1	ENSG00000160951|ENST00000292513|PTGER1	ENSG00000160951|ENST00000292513|PTGER1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.9300537109375	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.85441	1	3673	3673		20.837	0.80668	1	2526100			31871	5617	21066	21076	36302	36302					0.17569039722025082
LLRQDLPLLH	10	Unmodified	_LLRQDLPLLH_					0	0	0			REV__ENST00000504208.5_1_5:136964069-137033992:-|nuORF	REV__ENST00000504208.5_1_5:136964069-137033992:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.58209228515625	3	406.583674	1216.72919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.29	1	111.36	110.86	111.86	0.069542								0	0	0	0.45132	1	11975	11975		24.519	7.0512	1		+		31872	19982	21067	21077	36303	36303					0.12949644593800258
LLRQLMNLPQS	11	Unmodified	_LLRQLMNLPQS_					0	0	0		nc|ENSG00000166889|Q86TB9-2|PATL1;ENSG00000166889|ENST00000300146|PATL1;ENST00000531919.1_1_11:59410337-59415227:-|nuORF	nc|ENSG00000166889|Q86TB9-2|PATL1	nc|ENSG00000166889|Q86TB9-2|PATL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2302551269531	3	438.251707	1311.73329	1.1969	0.00052456	0.60858	0.00026671	1.8055	0.00079127	438.25224696843685	28.31	0.2429	28.137	28.091	28.334	-0.17336					7	5	2	0	0	0	0.17365	1	1726	1726		21.032	8.0748	1	80098			31873	6242	21068	21078	36304	36304					0.08989366025207346
LLRQSRAS	8	Unmodified	_LLRQSRAS_					0	0	0		ENST00000494490.1_3_15:57999305-58006874:+|nuORF	ENST00000494490.1_3_15:57999305-58006874:+|nuORF	ENST00000494490.1_3_15:57999305-58006874:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7774353027344	2	465.777608	929.540663	-1.2002	-0.00055902	1.1319	0.00052724	-0.068228	-3.1779E-05	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.84341	1	7577	7577		24.203	0	1	683640			31874	12750	21069	21079	36305	36305					0.07307411740180214
LLRQSRAS	8	Unmodified	_LLRQSRAS_					0	0	0		ENST00000494490.1_3_15:57999305-58006874:+|nuORF	ENST00000494490.1_3_15:57999305-58006874:+|nuORF	ENST00000494490.1_3_15:57999305-58006874:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.777587890625	2	465.777608	929.540663	-0.25577	-0.00011913	0.16818	7.8335E-05	-0.08759	-4.0797E-05	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.85277	1	7806	7806		25.45	0	1	451640			31875	12750	21069	21079	36306	36306					0.07307411740180214
LLRQVQCKPLL	11	Unmodified	_LLRQVQCKPLL_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.9394836425781	3	437.60408	1309.79041	-1.6473	-0.00072087	0.41371	0.00018104	-1.2336	-0.00053983	437.60448860930535	55.933	0.55177	55.933	55.744	56.296	0					28	17	2	0	0	0	0.17273	1	4753	4753		23.378	14.579	1	132720			31876	8303	21070	21080	36307	36307					0.1479083330159483
LLRQVQCKPLL	11	Unmodified	_LLRQVQCKPLL_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	437.60408	1309.79041	-0.12424	-5.4368E-05	-3.5559	-0.0015561	-3.6801	-0.0016104	437.6025790552047	56.079	0.8074	56.069	55.454	56.261	-0.010136	0.11974	-0.00090366	NaN	23.378	41	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128250			31877	8303	21070	21080							0.1479083330159483
LLRQVQCKPLL	11	Unmodified	_LLRQVQCKPLL_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	437.60408	1309.79041	-0.67361	-0.00029478	-2.7789	-0.0012161	-3.4525	-0.0015108	437.6028958096325	55.882	0.84578	55.846	55.336	56.182	-0.036827	-0.1033	0.00011636	NaN	23.378	55	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128370			31878	8303	21070	21080							0.1479083330159483
LLRQVTTH	8	Unmodified	_LLRQVTTH_					0	0	0			REV__nc|ENSG00000163357|Q5T197-2|DCST1	REV__nc|ENSG00000163357|Q5T197-2|DCST1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23284912109375	2	484.287808	966.561064	0.51715	0.00025045	-1.0327	-0.00050011	-0.51551	-0.00024966	484.28718224829134	23.216	0.48314	22.642	22.436	22.92	-0.57415					18	11	2	0	0	0	0.4196	1	1001	1001		40.573	10.255	1	149490	+		31879	20902	21071	21081	36308	36308					0.07644582399984756
LLRRATPHP	9	Unmodified	_LLRRATPHP_					0	0	0		ENSG00000137269|ENST00000370888|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8206176757812	2	530.82235	1059.63015	-1.2397	-0.00065807	-1.5566	-0.00082629	-2.7963	-0.0014844	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.7932	1	7614	7614		24.203	0	1	869100			31880	4185	21072	21082	36309	36309					0.10271666419566827
LLRRAWRR	8	Unmodified	_LLRRAWRR_					0	0	0		ENSG00000176022|ENST00000379198|B3GALT6	ENSG00000176022|ENST00000379198|B3GALT6	ENSG00000176022|ENST00000379198|B3GALT6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.308349609375	2	563.857058	1125.69956	0.42837	0.00024154	-2.7047	-0.0015251	-2.2763	-0.0012835	564.355753289446	21.705	0.13048	21.077	21.013	21.144	-0.62835					4	2	2	0	0	0	0.4196	1	815	815		7.6903	0	1	22970			31881	7050	21073	21083	36310	36310					0.14174170158958077
LLRRGAST	8	Unmodified	_LLRRGAST_					0	0	0		ENST00000475109.5_1_7:35840829-35903188:+|nuORF	ENST00000475109.5_1_7:35840829-35903188:+|nuORF	ENST00000475109.5_1_7:35840829-35903188:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2658386230469	2	437.266876	872.519199	0.61137	0.00026733	-3.2	-0.0013992	-2.5886	-0.0011319	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.83058	1	917	917		12.959	1.4482	1	1313200			31882	12316	21074	21084	36311	36311					0.0778402671146523
LLRRGGFG	8	Unmodified	_LLRRGGFG_					0	0	0		ENST00000251546.8_1_1:11721807-11722026:+|nuORF	ENST00000251546.8_1_1:11721807-11722026:+|nuORF	ENST00000251546.8_1_1:11721807-11722026:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2625732421875	2	438.264136	874.51372	-1.5833	-0.00069392	-0.15448	-6.7702E-05	-1.7378	-0.00076162	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.81548	1	2161	2161		20.482	1.1219	1	11160000			31883	9302	21075	21085	36312	36312					0.07144347919665961
LLRRGPDS	8	Unmodified	_LLRRGPDS_					0	0	0		chr17:13496818-13539067|25|15.16|0.15|6.64|-|0|TE_info:MLT1H1,MLT1H1_dup3156,ERVL-MaLR,LTR,donor,-,13539067,13539297|HS3ST3A1,None|4	chr17:13496818-13539067|25|15.16|0.15|6.64|-|0|TE_info:MLT1H1,MLT1H1_dup3156,ERVL-MaLR,LTR,donor,-,13539067,13539297|HS3ST3A1,None|4	chr17:13496818-13539067|25|15.16|0.15|6.64|-|0|TE_info:MLT1H1,MLT1H1_dup3156,ERVL-MaLR,LTR,donor,-,13539067,13539297|HS3ST3A1,None|4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26361083984375	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.87922	1	7577	7577		31.955	0	1	1329900			31884	213	21076	21086	36313	36313					0.05435722848858404
LLRRINRASV	10	Unmodified	_LLRRINRASV_					0	0	0			REV__ENST00000518667.1_1_8:66643803-66660021:-|nuORF	REV__ENST00000518667.1_1_8:66643803-66660021:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.3773193359375	2	599.380563	1196.74657	3.2712	0.0019607	-4.2058	-0.0025209	-0.93465	-0.00056021	599.3778849492661	103.51	3.7036	103.46	103.04	106.74	-0.043755					239	88	5	0	0	0	0.86718	1	11471	11471		27.882	2.3082	1	11967000	+		31885	23546	21077	21087	36314	36314					0.15606984919440947
LLRRKEELKMR	11	Unmodified	_LLRRKEELKMR_					0	0	0			REV__nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	REV__nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.2992248535156	3	491.301172	1470.88169	-0.91351	-0.00044881	-3.1812	-0.0015629	-4.0947	-0.0020117	491.29952222850153	106.73	1.7069	106.77	105.94	107.65	0.03688					94	39	3	0	0	0	0.79224	1	11695	11695		12.957	2.8536	1	1168300	+		31886	22860	21078	21088	36315	36315					0.16508096998882138
LLRRKEELKMR	11	Unmodified	_LLRRKEELKMR_					0	0	0			REV__nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	REV__nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.6333923339844	3	491.301172	1470.88169	-0.91815	-0.00045109	-3.2798	-0.0016114	-4.198	-0.0020625	491.2995474316363	112.82	1.8082	112.85	112.73	114.54	0.028854					87	49	2	0	0	0	0.17882	1	12313	12313		21.032	0	1	1519800	+		31887	22860	21078	21088	36316	36316					0.16508096998882138
LLRRKNFN	8	Unmodified	_LLRRKNFN_					0	0	0		ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.8206787109375	2	530.82235	1059.63015	-0.034622	-1.8378E-05	-2.7003	-0.0014334	-2.7349	-0.0014517	530.820933749492	80.358	1.1642	80.42	79.976	81.14	0.062225					91	34	3	0	0	0	0.85277	1	7866	7866		25.45	2.4077	1	600980			31888	9024	21079	21089	36317	36317					0.10271666419566827
LLRRKRAEELL	11	Unmodified	_LLRRKRAEELL_					0	0	0			REV__ENSG00000105248|ENST00000262962|YJU2	REV__ENSG00000105248|ENST00000262962|YJU2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2958068847656	3	466.296415	1395.86742	-0.33343	-0.00015548	-1.6177	-0.00075434	-1.9512	-0.00090982	466.295599377718	16.725	0.32122	16.646	16.513	16.834	-0.079056					21	12	3	0	0	0	0.80593	1	141	141		10.104	0	1	51127	+		31889	17519	21080	21090	36318	36318					0.1853176784227344
LLRRLAFVEV	10	Unmodified	_LLRRLAFVEV_					0	0	0			REV__ENSG00000105447|ENST00000253237|GRWD1	REV__ENSG00000105447|ENST00000253237|GRWD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	607.4393310546875	2	608.38224	1214.74993	1.8388	0.0011187	-0.42515	-0.00025866	1.4136	0.00086003	608.8819017804794	95.101	1.2497	95.534	94.669	95.919	0.4324					66	29	4	0	0	0	0.37624	1	11298	11298		14.865	0	1	345850	+		31890	17541	21081	21091	36319	36319					0.15114234973452767
LLRRLDYNQKH	11	Unmodified	_LLRRLDYNQKH_					0	0	0			REV__nc|ENSG00000103111|Q7L1V2-2|MON1B	REV__nc|ENSG00000103111|Q7L1V2-2|MON1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.7843322753906	3	485.944153	1454.81063	0.78889	0.00038336	-3.3551	-0.0016304	-2.5662	-0.001247	486.2767726298324	103.94	0.70232	104.05	103.74	104.44	0.11684					26	16	2	0	0	0	0.18028	1	10988	10988		3.4087	0	1	69900	+		31891	17388	21082	21092	36320	36320					0.1014172028574194
LLRRLKTLLV	10	Unmodified	_LLRRLKTLLV_					0	0	0		ENST00000395613.2_1_22:51193627-51193861:-|nuORF;ENST00000558020.1_1_15:101828356-101835383:-|nuORF;ENST00000560856.5_1_15:101827905-101835383:-|nuORF;ENST00000558059.5_1_15:101827046-101835071:-|nuORF;ENST00000558036.5_1_15:101827046-101835383:-|nuORF;ENSG00000131876|ENST00000254193|SNRPA1	ENST00000395613.2_1_22:51193627-51193861:-|nuORF	ENST00000395613.2_1_22:51193627-51193861:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.8796997070312	2	612.929357	1223.84416	3.0913	0.0018948	-1.3189	-0.0008084	1.7724	0.0010864	612.9286886115806	104.98	0.45683	104.94	104.73	105.19	-0.04039					15	10	2	0	0	0	0.37624	1	11576	11576		11.511	1.8054	1	66824			31892	3755	21083	21093	36321	36321					0.24119373795610954
LLRRLPKECNR	11	Unmodified	_LLRRLPKECNR_					0	0	0			REV__chr2:73734588-73736617|21|21.95|0.52|5.39|-|0|TE_info:L2,L2_dup6768,L2,LINE,donor,+,73736617,73736795|TPRKB,None|4	REV__chr2:73734588-73736617|21|21.95|0.52|5.39|-|0|TE_info:L2,L2_dup6768,L2,LINE,donor,+,73736617,73736795|TPRKB,None|4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.6068115234375	3	466.610117	1396.80852	-0.93039	-0.00043413	-3.747	-0.0017484	-4.6774	-0.0021825	466.6082212965859	101	2.1787	101	99.472	101.65	0					144	51	4	0	0	0	0.76579	1	10128	10128		18.531	0	1	331070	+		31893	15766	21084	21094	36322	36322					0.12598968276302003
LLRRMPPVLL	10	Unmodified	_LLRRMPPVLL_					0	0	0			REV__chr8:86477317-86478923|16|12.25|0.15|6.33|-|1|None,RMDN1|1	REV__chr8:86477317-86478923|16|12.25|0.15|6.33|-|1|None,RMDN1|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.366455078125	2	604.389011	1206.76347	-0.12295	-7.4309E-05	0.62533	0.00037794	0.50238	0.00030363	604.3892772078425	105.07	0.63718	105.1	104.99	105.63	0.038322					19	14	3	0	0	0	0.37624	1	11465	11465		18.324	0.95945	1	158870	+		31894	15927	21085	21095	36323	36323					0.1683576948105383
LLRRMRTSD	9	Unmodified	_LLRRMRTSD_					0	0	0			REV__ENSG00000281106|ENST00000629372|TMEM272	REV__ENSG00000281106|ENST00000629372|TMEM272	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3192138671875	2	574.321857	1146.62916	-1.3729	-0.0007885	-2.7541	-0.0015817	-4.127	-0.0023702	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.74721	1	9503	9503		37.159	0.71236	1	1586900	+		31895	24047	21086	21096	36324	36324					0.06171083988351711
LLRRRWCLRR	10	Unmodified	_LLRRRWCLRR_					0	0	0		ENST00000298746.4_1_10:116697986-116698055:+|nuORF	ENST00000298746.4_1_10:116697986-116698055:+|nuORF	ENST00000298746.4_1_10:116697986-116698055:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62310791015625	3	476.626213	1426.85681	-1.6911	-0.000806	-3.571	-0.001702	-5.262	-0.002508	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.85259	8	12750	12100;12196;12317;12388;12718;12750;12794;12854		20.03	2.8366	1	2577100			31896	9773	21087	21097	36325;36326;36327;36328;36329;36330;36331;36332	36330					0.16045506706836932
LLRRSSPGLAP	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLRRSSPGLAP_					1	0	0		ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5747985839844	3	403.575178	1207.70371	-1.8273	-0.00073744	0.97702	0.0003943	-0.85025	-0.00034314	403.5755152703731	81.064	0.6007	81.209	80.845	81.446	0.14513					41	13	4	0	0	0	0.50531	1	7754	7754		51.528	9.1897	1	520100			31897	14068	21088	21098	36333	36333					0.10816170071393572
LLRRSSPGLAP	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLRRSSPGLAP_					1	0	0		ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5748596191406	3	403.575178	1207.70371	-1.8238	-0.00073605	0.70537	0.00028467	-1.1185	-0.00045138	403.575388315242	82.768	3.2423	82.923	82.261	85.503	0.15474					165	75	3	0	0	0	0.52654	1	8046	8046		50.034	16.112	1	1511600			31898	14068	21088	21098	36334	36334					0.10816170071393572
LLRRSSPGLAP	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLRRSSPGLAP_					1	0	0		ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.90911865234375	3	403.575178	1207.70371	0.5494	0.00022172	-1.2677	-0.0005116	-0.71827	-0.00028987	403.5745990745283	80.411	1.2826	80.552	79.622	80.904	0.14118					87	49	3	0	0	0	0.52654	1	7680	7680		50.034	7.1692	1	245600			31899	14068	21088	21098	36335	36335					0.10816170071393572
LLRRSSPGLAP	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLRRSSPGLAP_					1	0	0		ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.57470703125	3	403.575178	1207.70371	-1.7546	-0.00070812	0.79854	0.00032227	-0.95608	-0.00038585	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.60687	1	7943	7943		43.651	9.5643	1	1090300			31900	14068	21088	21098	36336	36336					0.10816170071393572
LLRRSSPGLAP	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLRRSSPGLAP_					1	0	0		ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5747985839844	3	403.575178	1207.70371	1.058	0.00042698	-1.9376	-0.00078196	-0.87959	-0.00035498	403.5743201000087	79.412	0.85108	79.828	79.359	80.21	0.41621					61	19	4	0	0	0	0.60687	1	9080	9080		43.651	17.587	1	1726100			31901	14068	21088	21098	36337	36337					0.10816170071393572
LLRRSSPGLAP	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLRRSSPGLAP_					1	0	0		ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5749816894531	3	403.575178	1207.70371	0.97828	0.00039481	-1.9734	-0.0007964	-0.99509	-0.00040159	403.5743581781147	80.189	0.84587	80.605	80.082	80.928	0.41621					61	19	4	0	0	0	0.60687	1	9176	9176		43.651	7.3331	1	3876600			31902	14068	21088	21098	36338	36338					0.10816170071393572
LLRRSSPGLAP	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLRRSSPGLAP_					1	0	0		ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5748291015625	3	403.575178	1207.70371	0.92254	0.00037231	-2.2112	-0.0008924	-1.2887	-0.00052008	403.57437110018327	80.894	0.89915	81.316	80.891	81.79	0.4215					88	21	5	0	0	0	0.60687	1	9248	9248		43.651	7.204	1	18400000			31903	14068	21088	21098	36339	36339					0.10816170071393572
LLRRSSPGLAP	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLRRSSPGLAP_					1	0	0		ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.57470703125	3	403.575178	1207.70371	0.82597	0.00033334	-2.2428	-0.00090514	-1.4168	-0.0005718	403.5742849619775	82.098	2.6206	82.524	81.753	84.373	0.42646					188	63	3	0	0	0	0.60687	1	9404	9404		43.651	6.1426	1	14382000			31904	14068	21088	21098	36340	36340					0.10816170071393572
LLRRSSPGLAP	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LLRRSSPGLAP_					1	0	0		ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	ENST00000577495.5_1_17:80376286-80376427:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747375488281	3	403.575178	1207.70371	-0.18431	-7.4383E-05	-0.84021	-0.00033909	-1.0245	-0.00041347	403.57480385646164	80.099	0.84451	80.626	80.105	80.949	0.52676					63	19	4	0	0	0	0.54689	2	9192	9192;9202		48.602	12.284	1	4093300			31905	14068	21088	21098	36341;36342	36341					0.10816170071393572
LLRRVESA	8	Unmodified	_LLRRVESA_					0	0	0			REV__ENSG00000180264|ENST00000696331|ADGRD2	REV__ENSG00000180264|ENST00000696331|ADGRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28778076171875	2	472.287808	942.561064	-0.108	-5.1006E-05	-0.19809	-9.3555E-05	-0.30609	-0.00014456	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.86288	1	10301	10301		26.796	0	1	46909000	+		31906	22385	21089	21099	36343	36343					0.0874858239999412
LLRRVESA	8	Unmodified	_LLRRVESA_					0	0	0			REV__ENSG00000180264|ENST00000696331|ADGRD2	REV__ENSG00000180264|ENST00000696331|ADGRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2874755859375	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.90465	1	10053	10053		40.573	8.6178	1	40161000	+		31907	22385	21089	21099	36344	36344					0.0874858239999412
LLRRVNSTML	10	Unmodified	_LLRRVNSTML_					0	0	0		nc|ENSG00000179709|Q86W28-2|NLRP8;ENSG00000179709|ENST00000291971|NLRP8	nc|ENSG00000179709|Q86W28-2|NLRP8	nc|ENSG00000179709|Q86W28-2|NLRP8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.857177734375	2	601.855532	1201.69651	-0.51505	-0.00030999	4.0494	0.0024371	3.5343	0.0021271	601.8578575542072	103.62	2.2032	103.62	103.26	105.47	-0.0035706					116	52	4	0	0	0	0.86718	1	11239	11239		27.882	3.3631	1	1418100			31908	7289	21090	21100	36345	36345					0.10373114199296651
LLRSRPSA	8	Unmodified	_LLRSRPSA_					0	0	0			REV__ENST00000433656.2_1_9:98637459-98637690:-|nuORF	REV__ENST00000433656.2_1_9:98637459-98637690:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2745666503906	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.81897	1	9650	9650		20.947	1.587	1	41438000	+		31909	26654	21091	21101	36346	36346					0.08152313228515595
LLRSRTEGG	9	Unmodified	_LLRSRTEGG_					0	0	0			REV__ENST00000434411.5_1_17:75084757-75084847:+|nuORF	REV__ENST00000434411.5_1_17:75084757-75084847:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7801208496094	2	494.780348	987.546142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.241	1	84.389	83.889	84.889	0.14793								0	0	0	0.30613	1	8194	8194		42.396	5.237	1		+		31910	26665	21092	21102	36347	36347					0.05187090532001548
LLRSYWHM	8	Unmodified	_LLRSYWHM_					0	0	0			REV__ENSG00000139549|ENST00000649637|DHH	REV__ENSG00000139549|ENST00000649637|DHH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.783203125	2	553.284211	1104.55387	-0.837	-0.0004631	2.085	0.0011536	1.248	0.00069051	553.2853629194899	74.193	0.89967	74.584	74.376	75.275	0.39111					31	21	3	0	0	0	0.4196	1	8364	8364		42.474	0	1	569770	+		31911	19549	21093	21103	36348	36348					0.005775265278998631
LLRTAPPWPL	10	Unmodified	_LLRTAPPWPL_					0	0	0			REV__ENST00000220003.13_1_15:75095013-75095301:+|nuORF	REV__ENST00000220003.13_1_15:75095013-75095301:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3526000976562	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.06	1	114.03	113.53	114.53	-0.024452								0	0	0	0.45132	1	12629	12629		21.96	1.013	1		+		31912	24150	21094	21104	36349	36349					0.1114287453635825
LLRTILHE	8	Unmodified	_LLRTILHE_					0	0	0			REV__ENSG00000145975|ENST00000274673|FAM217A	REV__ENSG00000145975|ENST00000274673|FAM217A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.4335021972656	2	497.805834	993.597115	-0.20677	-0.00010293	-1.3905	-0.00069218	-1.5972	-0.00079511	497.8047173695521	67.026	1.0445	67.577	66.896	67.941	0.55071					43	31	2	0	0	0	0.90465	1	7364	7364		40.573	0	1	189240	+		31913	19979	21095	21105	36350	36350					0.1000603957684234
LLRTKQLRPHR	11	Unmodified	_LLRTKQLRPHR_					0	0	0			REV__ENST00000549056.1_1_12:105623423-105623513:-|nuORF	REV__ENST00000549056.1_1_12:105623423-105623513:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	473.2989196777344	3	473.300271	1416.87898	-0.89168	-0.00042203	-2.0976	-0.00099278	-2.9893	-0.0014148	473.2991519032533	107.53	0.67749	107.66	107.32	107.99	0.13867					65	16	5	0	0	0	0.7896	1	11575	11575		13.508	0	1	4814600	+		31914	28583	21096	21106	36351	36351					0.18722009656244154
LLRTLAVFV	9	Unmodified	_LLRTLAVFV_					0	0	0			REV__ENST00000307741.10_1_19:2813382-2813568:+|nuORF	REV__ENST00000307741.10_1_19:2813382-2813568:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3140869140625	2	516.334227	1030.6539	-0.047308	-2.4427E-05	-0.89764	-0.00046348	-0.94495	-0.00048791	516.3339714405417	99.551	1.0821	99.593	99.009	100.09	0.041107					40	25	2	0	0	0	0.20789	1	10521	10521		18.324	5.3652	1	331360	+		31915	24850	21097	21107	36352	36352					0.1398008713335912
LLRTLDIM	8	Unmodified	_LLRTLDIM_					0	0	0			REV__ENST00000469758.5_1_10:120085736-120095927:-|nuORF	REV__ENST00000469758.5_1_10:120085736-120095927:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7907409667969	2	487.788795	973.563038	0.84663	0.00041298	2.8765	0.0014031	3.7232	0.0018161	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.86791	1	8663	8663		28.254	1.4582	1	2238600	+		31916	27200	21098	21108	36353	36353					0.07519875093578321
LLRTLKSH	8	Unmodified	_LLRTLKSH_					0	0	0			REV__ENST00000510629.1_1_5:57752724-57753235:-|nuORF	REV__ENST00000510629.1_1_5:57752724-57753235:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.3066711425781	2	484.306001	966.597449	-0.18342	-8.8831E-05	0.25659	0.00012427	0.073176	3.544E-05	484.3059108174794	31.955	0.42864	32.082	31.86	32.289	0.12642					24	9	3	0	0	0	0.9295	1	2193	2193		55.504	7.5886	1	289130	+		31917	27957	21099	21109	36354	36354					0.11281459296708363
LLRTPFLQTL	10	Unmodified	_LLRTPFLQTL_					0	0	0		ENST00000326654.6_1_5:172342502-172342913:+|nuORF	ENST00000326654.6_1_5:172342502-172342913:+|nuORF	ENST00000326654.6_1_5:172342502-172342913:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2490539550781	3	401.248291	1200.72304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.85	1	111.9	111.4	112.4	0.041832								0	0	0	0.45132	1	13531	13531		22.58	0.89391	1				31918	10080	21100	21110	36355	36355					0.130711263622743
LLRTRWNWHSV	11	Unmodified	_LLRTRWNWHSV_					0	0	0			REV__ENST00000009530.11_1_5:149782146-149782686:-|nuORF	REV__ENST00000009530.11_1_5:149782146-149782686:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.93804931640625	3	489.93711	1466.7895	0.17595	8.6207E-05	-1.0747	-0.00052651	-0.8987	-0.00044031	489.93655351151625	17.097	0.34768	16.615	16.457	16.804	-0.48256					14	7	3	0	0	0	0.79224	1	210	210		12.957	0	1	213450	+		31919	24059	21101	21111	36356	36356					0.07477754976889628
LLRVHIVII	9	Unmodified	_LLRVHIVII_					0	0	0			REV__ENST00000521433.1_1_8:89341227-89721666:+|nuORF	REV__ENST00000521433.1_1_8:89341227-89721666:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3267822265625	2	538.371144	1074.72774	1.2459	0.00067074	0.16011	8.62E-05	1.406	0.00075694	538.3714837564081	100.87	0.36197	100.92	100.82	101.18	0.046356					19	8	3	0	0	0	0.20789	1	10846	10846		3.9852	0	1	241410	+		31920	28119	21102	21112	36357	36357					0.1933605529570741
LLRVHIVII	9	Unmodified	_LLRVHIVII_					0	0	0			REV__ENST00000521433.1_1_8:89341227-89721666:+|nuORF	REV__ENST00000521433.1_1_8:89341227-89721666:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3264770507812	2	538.371144	1074.72774	0.069262	3.7289E-05	0.17083	9.1972E-05	0.2401	0.00012926	538.3715728451374	101.05	0.40037	101.26	101	101.4	0.2058					10	9	2	0	0	0	0.20789	1	10603	10603		3.9852	0	1	210420	+		31921	28119	21102	21112	36358	36358					0.1933605529570741
LLRVIQTLSL	10	Unmodified	_LLRVIQTLSL_					0	0	0			REV__ENST00000371989.7_1_9:136229248-136229398:-|nuORF	REV__ENST00000371989.7_1_9:136229248-136229398:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.37451171875	2	578.376623	1154.73869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.443	1	47.367	46.867	47.867	0.92315								0	0	0	0.45132	1	4391	4391		29.17	4.6509	1		+		31922	25702	21103	21113	36359	36359					0.1675141287933002
LLRVLEPLWL	10	Unmodified	_LLRVLEPLWL_					0	0	0			REV__ENST00000276569.7_1_8:66546285-66546405:-|nuORF	REV__ENST00000276569.7_1_8:66546285-66546405:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3942260742188	2	626.394816	1250.77508	1.3699	0.00085812	2.3039	0.0014431	3.6738	0.0023013	626.3960367869279	109.98	0.78311	110.11	109.72	110.51	0.12289					43	29	2	0	0	0	0.8488	1	11798	11798		17.365	0.89182	1	2615600	+		31923	24584	21104	21114	36360	36360					0.15972289776027537
LLRVLESLVLP	11	Unmodified	_LLRVLESLVLP_					0	0	0			REV__ENST00000568371.1_1_16:74401492-74401992:-|nuORF	REV__ENST00000568371.1_1_16:74401492-74401992:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3795776367188	2	626.405381	1250.79621	0.93069	0.00058299	-2.8746	-0.0018007	-1.9439	-0.0012177	626.404217061838	105.76	0.56094	105.8	105.38	105.94	0.03833					17	13	2	0	0	0	0.17564	1	11519	11519		9.7057	4.1478	1	240720	+		31924	28897	21105	21115	36361	36361					0.18084255084886536
LLRWEEEL	8	Unmodified	_LLRWEEEL_					0	0	0		ENST00000585439.1_1_19:10446311-10450252:-|nuORF;ENST00000587992.1_1_19:10446311-10450332:-|nuORF;ENSG00000076662|ENST00000160262|ICAM3	ENST00000585439.1_1_19:10446311-10450252:-|nuORF	ENST00000585439.1_1_19:10446311-10450252:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.1602172851562	2	544.292756	1086.57096	-2.1513	-0.0011709	-2.6892	-0.0014637	-4.8404	-0.0026346	544.7938829308276	42.429	0.15941	42.862	42.765	42.924	0.4334					5	3	2	0	0	0	0.4196	1	3787	3787		31.955	3.7006	1	91275			31925	1363	21106	21116	36362	36362					0.031137256147076187
LLRYFLLITN	10	Unmodified	_LLRYFLLITN_					0	0	0		ENST00000503601.1_1_4:2083186-2091962:-|nuORF	ENST00000503601.1_1_4:2083186-2091962:-|nuORF	ENST00000503601.1_1_4:2083186-2091962:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7513732910156	3	422.592058	1264.75434	-1.7708	-0.00074834	2.5026	0.0010576	0.73181	0.00030926	422.59293076248946	77.573	0.089783	77.698	77.657	77.747	0.12485					5	3	2	0	0	0	0.37624	1	7287	7287		14.086	0	1	23572			31926	12887	21107	21117	36363	36363					0.13255699396381715
LLRYLIHLRFQ	11	Unmodified	_LLRYLIHLRFQ_					0	0	0		ENST00000534964.6_1_15:52874353-52879255:-|nuORF;ENST00000568871.1_1_15:52874353-52877153:-|nuORF;ENSG00000047346|ENST00000619572|ATOSA;nc|ENSG00000047346|Q32MH5-3|ATOSA	ENST00000534964.6_1_15:52874353-52879255:-|nuORF	ENST00000534964.6_1_15:52874353-52879255:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.2995300292969	3	491.301389	1470.88234	-0.76352	-0.00037512	-3.6401	-0.0017884	-4.4036	-0.0021635	491.2995386028914	111.52	0.67294	111.52	111.3	111.98	0					49	24	3	0	0	0	0.80593	1	11607	11607		10.104	0	1	27267			31927	958	21108	21118	36364	36364					0.16573259710253296
LLRYLRELPL	10	Unmodified	_LLRYLRELPL_					0	0	0		nc|ENSG00000119777|Q6NUQ4-2|TMEM214;ENSG00000119777|ENST00000238788|TMEM214;ENST00000469445.1_1_2:27263203-27263702:+|nuORF	nc|ENSG00000119777|Q6NUQ4-2|TMEM214	nc|ENSG00000119777|Q6NUQ4-2|TMEM214	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4054565429688	2	643.403173	1284.79179	1.6039	0.001032	2.8597	0.0018399	4.4636	0.0028719	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.85694	1	11529	11529		21.96	1.013	1	21138000			31928	3095	21109	21119	36365	36365					0.16078790662004394
LLRYMVKQL	9	Unmodified	_LLRYMVKQL_					0	0	0		ENSG00000123360|ENST00000243052|PDE1B	ENSG00000123360|ENST00000243052|PDE1B	ENSG00000123360|ENST00000243052|PDE1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3529052734375	2	582.352094	1162.68964	-0.28407	-0.00016543	2.7667	0.0016112	2.4827	0.0014458	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.69914	1	10885	10885		40.573	5.4206	1	61091000			31929	3270	21110	21120	36366	36366					0.11479801318728278
LLRYMVKQL	9	Unmodified	_LLRYMVKQL_					0	0	0		ENSG00000123360|ENST00000243052|PDE1B	ENSG00000123360|ENST00000243052|PDE1B	ENSG00000123360|ENST00000243052|PDE1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3544921875	2	582.352094	1162.68964	-1.3468	-0.00078434	3.9839	0.00232	2.637	0.0015357	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.77546	2	12452	12452;12765		31.955	3.8734	1	3937500			31930	3270	21110	21120	36367;36368	36367					0.11479801318728278
LLRYQRFEK	9	Unmodified	_LLRYQRFEK_					0	0	0		nc|ENSG00000143951|O95876-2|WDPCP;ENSG00000143951|ENST00000272321|WDPCP;nc|ENSG00000143951|O95876-3|WDPCP	nc|ENSG00000143951|O95876-2|WDPCP	nc|ENSG00000143951|O95876-2|WDPCP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2418212890625	3	418.24354	1251.70879	1.0772	0.00045052	-4.1231	-0.0017245	-3.0459	-0.0012739	418.24182739007693	17.262	0.77996	16.78	16.373	17.153	-0.48256					36	17	3	0	0	0	0.75725	1	230	230		36.447	6.3076	1	374480			31931	4678	21111	21121	36369	36369					0.09300473933967623
LLSAEPLNL	9	Unmodified	_LLSAEPLNL_					0	0	0			REV__nc|ENSG00000068745|Q9UHH9-4|IP6K2	REV__nc|ENSG00000068745|Q9UHH9-4|IP6K2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2861328125	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.657	1	49.127	48.627	49.627	0.46941								0	0	0	0.39224	1	4701	4701		53.351	3.9099	1		+		31932	29705	21112	21122	36370	36370					0.06871224728752168
LLSAFIFLVSV	11	Unmodified	_LLSAFIFLVSV_					0	0	0		ENSG00000147256|ENST00000276211|ARHGAP36	ENSG00000147256|ENST00000276211|ARHGAP36	ENSG00000147256|ENST00000276211|ARHGAP36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.87109375	2	604.8681	1207.72165	3.2	0.0019356	-2.0868	-0.0012622	1.1132	0.00067335	604.8668313770175	117.51	0.42224	117.48	117.29	117.71	-0.02433					16	12	2	0	0	0	0.75921	1	13018	13018		19.997	2.6318	1	52655			31933	4893	21113	21123	36371	36371					0.12609492273486467
LLSALPNVG	9	Unmodified	_LLSALPNVG_					0	0	0		ENSG00000102921|ENST00000262384|N4BP1	ENSG00000102921|ENST00000262384|N4BP1	ENSG00000102921|ENST00000262384|N4BP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2655029296875	2	442.26601	882.517468	0.69427	0.00030705	-0.25783	-0.00011403	0.43645	0.00019302	442.26575041604	37.447	1.2889	37.933	36.958	38.246	0.48581					72	31	4	0	0	0	0.58151	1	3016	3016		47.916	5.5195	1	1479500			31934	2034	21114	21124	36372	36372					0.07150972902843478
LLSAPAASL	9	Unmodified	_LLSAPAASL_					0	0	0			REV__ENST00000519927.5_1_8:72443445-72460383:-|nuORF	REV__ENST00000519927.5_1_8:72443445-72460383:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.7512512207031	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.78058	1	7264	7264		30.504	0	1	423780	+		31935	28091	21115	21125	36373	36373					0.06383284011508294
LLSAPPTMLL	10	Unmodified	_LLSAPPTMLL_					0	0	0			REV__ENST00000303391.10_2_X:153293219-153293288:-|nuORF	REV__ENST00000303391.10_2_X:153293219-153293288:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.3135375976562	2	528.312103	1054.60965	-0.035772	-1.8899E-05	3.9847	0.0021051	3.9489	0.0020862	528.3142278244472	98.548	1.1039	98.598	98.087	99.191	0.04982					64	24	4	0	0	0	0.81018	1	10465	10465		38.806	1.647	1	426950	+		31936	24801	21116	21126	36374	36374					0.08453314924872757
LLSAPPTMLL	10	Unmodified	_LLSAPPTMLL_					0	0	0			REV__ENST00000303391.10_2_X:153293219-153293288:-|nuORF	REV__ENST00000303391.10_2_X:153293219-153293288:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.312744140625	2	528.312103	1054.60965	-0.082822	-4.3756E-05	3.9295	0.002076	3.8466	0.0020322	528.3142773088822	98.195	1.2332	98.423	97.779	99.012	0.22787					59	27	3	0	0	0	0.86452	1	10170	10170		30.504	3.7075	1	437980	+		31937	24801	21116	21126	36375	36375					0.08453314924872757
LLSASITLPP	10	Unmodified	_LLSASITLPP_					0	0	0		nc|ENSG00000148680|P34969-3|HTR7;nc|ENSG00000148680|P34969-2|HTR7;ENSG00000148680|ENST00000336152|HTR7	nc|ENSG00000148680|P34969-3|HTR7	nc|ENSG00000148680|P34969-3|HTR7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.30865478515625	2	506.307875	1010.6012	-1.5415	-0.00078047	2.7011	0.0013676	1.1596	0.00058712	506.3093285794098	44.216	2.5192	44.216	43.58	46.099	0					89	61	3	0	0	0	0.81018	1	3174	3174		38.806	1.647	1	527690			31938	4976	21117	21127	36376	36376					0.0963208427989457
LLSASITLPP	10	Unmodified	_LLSASITLPP_					0	0	0		nc|ENSG00000148680|P34969-3|HTR7;nc|ENSG00000148680|P34969-2|HTR7;ENSG00000148680|ENST00000336152|HTR7	nc|ENSG00000148680|P34969-3|HTR7	nc|ENSG00000148680|P34969-3|HTR7	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3085021972656	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.521	1	44.488	43.988	44.988	-0.033474								0	0	0	0.45132	1	3552	3552		37.159	8.0096	1				31939	4976	21117	21127	36377	36377					0.0963208427989457
LLSASITLPP	10	Unmodified	_LLSASITLPP_					0	0	0		nc|ENSG00000148680|P34969-3|HTR7;nc|ENSG00000148680|P34969-2|HTR7;ENSG00000148680|ENST00000336152|HTR7	nc|ENSG00000148680|P34969-3|HTR7	nc|ENSG00000148680|P34969-3|HTR7	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.30853271484375	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.88	1	44.849	44.349	45.349	-0.031067								0	0	0	0.45132	1	3601	3601		45.952	10.334	1				31940	4976	21117	21127	36378	36378					0.0963208427989457
LLSASITLPP	10	Unmodified	_LLSASITLPP_					0	0	0		nc|ENSG00000148680|P34969-3|HTR7;nc|ENSG00000148680|P34969-2|HTR7;ENSG00000148680|ENST00000336152|HTR7	nc|ENSG00000148680|P34969-3|HTR7	nc|ENSG00000148680|P34969-3|HTR7	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3085632324219	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.975	1	44.944	44.444	45.444	-0.031067								0	0	0	0.45132	1	3614	3614		35.618	2.1027	1				31941	4976	21117	21127	36379	36379					0.0963208427989457
LLSATPTIL	9	Unmodified	_LLSATPTIL_					0	0	0			REV__ENSG00000106278|ENST00000393386|PTPRZ1	REV__ENSG00000106278|ENST00000393386|PTPRZ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.790771484375	2	464.789318	927.564084	0.2474	0.00011499	2.8684	0.0013332	3.1158	0.0014482	464.7904221539816	34.07	1.6806	34.28	33.524	35.204	0.21003					97	40	4	0	0	0	0.62081	1	2505	2505		45.952	10.751	1	944210	+		31942	17604	21118	21128	36380	36380					0.09740412734140591
LLSCCQRL	8	Unmodified	_LLSCCQRL_					0	0	0		ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2445068359375	2	468.243698	934.472843	0.1062	4.9729E-05	3.3044	0.0015473	3.4106	0.001597	468.2450979766261	47.531	1.8726	47.521	47.036	48.909	-0.0093269					110	52	3	0	0	0	0.67263	3	3907	3888;3907;3915		68.485	9.7027	1	1766700			31943	10582	21119	21129	36381;36382;36383	36382					0.002985024935014735
LLSCCQRL	8	Unmodified	_LLSCCQRL_					0	0	0		ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2450866699219	2	468.243698	934.472843	-0.76236	-0.00035697	4.1339	0.0019357	3.3715	0.0015787	468.24549296496195	47.46	2.028	47.434	46.94	48.968	-0.026737					112	56	3	0	0	0	0.84634	3	3952	3952;3971;4022		60.294	7.9948	1	1887700			31944	10582	21119	21129	36384;36385;36386	36384					0.002985024935014735
LLSCCQRL	8	Unmodified	_LLSCCQRL_					0	0	0		ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.24456787109375	2	468.243698	934.472843	-0.58318	-0.00027307	4.0497	0.0018963	3.4665	0.0016232	468.24540363646156	47.508	2.0762	47.505	46.933	49.01	-0.002449					126	59	4	0	0	0	0.67263	2	3877	3877;3923		68.485	4.0726	1	1948700			31945	10582	21119	21129	36387;36388	36387					0.002985024935014735
LLSCCQRL	8	Unmodified	_LLSCCQRL_					0	0	0		ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.2451477050781	2	468.243698	934.472843	-1.0647	-0.00049855	4.3647	0.0020437	3.3	0.0015452	468.2456241225619	47.383	3.6723	47.402	45.915	49.587	0.018967					223	102	4	0	0	0	0.84634	3	3526	3526;3600;3650		60.294	4.0726	1	7165000			31946	10582	21119	21129	36389;36390;36391	36389					0.002985024935014735
LLSCCQRL	8	Unmodified	_LLSCCQRL_					0	0	0		ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2451477050781	2	468.243698	934.472843	0.29202	0.00013673	3.1538	0.0014767	3.4458	0.0016135	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.60155	2	3578	3578;3596		71.378	7.5501	1	7645500			31947	10582	21119	21129	36392;36393	36392					0.002985024935014735
LLSCCQRL	8	Unmodified	_LLSCCQRL_					0	0	0		ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	ENST00000368170.7_1_1:158259701-158259827:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.245361328125	2	468.243698	934.472843	-0.27929	-0.00013077	3.6741	0.0017204	3.3948	0.0015896	468.2452890208871	47.437	2.6016	47.349	46.711	49.313	-0.08765					186	72	4	0	0	0	0.60155	2	3550	3550;3594		71.378	7.7867	1	6668700			31948	10582	21119	21129	36394;36395	36394					0.002985024935014735
LLSCLGLFTG	10	Unmodified	_LLSCLGLFTG_					0	0	0			REV__ENSG00000120137|ENST00000239231|PANK3	REV__ENSG00000120137|ENST00000239231|PANK3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2820434570312	2	512.280803	1022.54705	-0.88857	-0.0004552	1.958	0.0010031	1.0695	0.00054786	512.2817341917631	86.454	3.0125	86.454	85.618	88.63	0					129	69	2	0	0	0	0.74274	1	8315	8315		42.396	8.2236	1	265310	+		31949	18399	21120	21130	36396	36396					0.036681688566886805
LLSCWGRPSP	10	Unmodified	_LLSCWGRPSP_					0	0	0			REV__ENST00000595393.5_1_19:17387517-17387742:+|nuORF	REV__ENST00000595393.5_1_19:17387517-17387742:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.29150390625	2	558.286951	1114.55935	3.9256	0.0021916	0.56663	0.00031634	4.4922	0.002508	558.2890747637853	105.47	0.58115	105.66	105.29	105.87	0.18647					53	13	5	0	0	0	0.73395	1	12881	12881		42.864	1.4377	1	609290	+		31950	29248	21121	21131	36397	36397					0.006652053197285568
LLSDDKNKPAV	11	Unmodified	_LLSDDKNKPAV_					0	0	0		ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.55853271484375	3	400.559194	1198.65575	-0.4013	-0.00016075	-1.3392	-0.00053643	-1.7405	-0.00069718	400.55857592859013	19.576	0.65935	19.502	19.226	19.886	-0.073704					41	18	3	0	0	0	0.64498	1	425	425		27.644	5.8635	1	413560			31951	5953	21122	21132	36398	36398					0.0643705136067183
LLSDVVSVV	9	Unmodified	_LLSDVVSVV_					0	0	0			REV__nc|ENSG00000149090|Q6UXH9-3|PAMR1	REV__nc|ENSG00000149090|Q6UXH9-3|PAMR1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77789306640625	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.882	1	79.882	79.382	80.382	0								0	0	0	0.31828	1	7358	7358		24.203	2.2429	1		+		31952	20147	21123	21133	36399	36399					0.07575822354476713
LLSEADITI	9	Unmodified	_LLSEADITI_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2;nc|ENSG00000188738|Q5CZC0-2|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7725524902344	2	487.773865	973.533177	0.67608	0.00032977	-0.43105	-0.00021025	0.24503	0.00011952	487.77347412068633	88.029	1.0335	88.179	87.768	88.802	0.15055					51	24	3	0	0	0	0.43338	1	8711	8711		55.504	0	1	758210			31953	7954	21124	21134	36400	36400					0.04535214629231632
LLSESMKQ	8	Unmodified	_LLSESMKQ_					0	0	0		chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35;ENSG00000118965|ENST00000281405|WDR35;nc|ENSG00000118965|Q9P2L0|WDR35;ENST00000445063.5_1_2:20113365-20153734:-|nuORF	chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2431945800781	2	468.24696	934.479368	-0.58318	-0.00027307	-2.918	-0.0013663	-3.5011	-0.0016394	468.24540363646156	47.508	2.0762	47.505	46.933	49.01	-0.002449					126	59	4	0	0	0	0.89962	1	3984	3984		38.806	0	1	1948700			31954	323	21125	21135	36401	36401					0.009507189258897597
LLSEVQPTSRA	11	Unmodified	_LLSEVQPTSRA_					0	0	0		ENSG00000205978|ENST00000382554|NYNRIN	ENSG00000205978|ENST00000382554|NYNRIN	ENSG00000205978|ENST00000382554|NYNRIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	600.8330078125	2	600.832777	1199.651	-0.16553	-9.9456E-05	0.026521	1.5935E-05	-0.13901	-8.3521E-05	600.8327192156527	46.471	0.48509	46.942	46.614	47.099	0.47139					23	11	3	0	0	0	0.53361	1	4378	4378		49.536	1.8787	1	858730			31955	8549	21126	21136	36402	36402					0.05916167217901602
LLSEVQPTSRA	11	Unmodified	_LLSEVQPTSRA_					0	0	0		ENSG00000205978|ENST00000382554|NYNRIN	ENSG00000205978|ENST00000382554|NYNRIN	ENSG00000205978|ENST00000382554|NYNRIN	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	600.832777	1199.651	-0.89771	-0.00053938	-0.027463	-1.6501E-05	-0.92518	-0.00055588	600.8329070575919	46.228	0.52188	47.151	46.833	47.355	0.92315	0.10444	-2.2368E-05	NaN	49.536	34	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	847720			31956	8549	21126	21136							0.05916167217901602
LLSFFPIVI	9	Unmodified	_LLSFFPIVI_					0	0	0			REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8270874023438	2	524.825704	1047.63685	-0.038995	-2.0466E-05	2.2661	0.0011893	2.2272	0.0011689	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.69914	1	10489	10489		40.573	4.9543	1	26414000	+		31957	19492	21127	21137	36403	36403					0.1149416652756372
LLSFFPIVI	9	Unmodified	_LLSFFPIVI_					0	0	0			REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.8274536132812	2	524.825704	1047.63685	2.0628	0.0010826	1.0096	0.00052987	3.0724	0.0016125	524.8261063804082	98.875	2.8907	99.236	98.608	101.5	0.36136					212	72	4	0	0	0	0.76996	1	11897	11897		33.516	0	1	10439000	+		31958	19492	21127	21137	36404	36404					0.1149416652756372
LLSGDVSGNY	10	Unmodified	_LLSGDVSGNY_					0	0	0			REV__ENSG00000186472|ENST00000333891|PCLO	REV__ENSG00000186472|ENST00000333891|PCLO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.7503662109375	2	512.750921	1023.48729	-0.55805	-0.00028614	0.78234	0.00040115	0.22429	0.00011501	512.7511737805738	70.839	0.81957	70.877	70.527	71.346	0.038055					96	44	3	0	0	0	0.6116	1	6766	6766		49.442	0	1	649230	+		31959	22856	21128	21138	36405	36405					-0.023514305529943158
LLSGFISA	8	Unmodified	_LLSGFISA_					0	0	0			REV__ENSG00000204084|ENST00000373024|INPP5B	REV__ENSG00000204084|ENST00000373024|INPP5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2328186035156	2	404.234179	806.453805	-0.18723	-7.5686E-05	-2.7376	-0.0011067	-2.9249	-0.0011823	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.85277	1	8511	8511		25.45	0	1	4185000	+		31960	23454	21129	21139	36406	36406					0.042836124657469554
LLSGFISA	8	Unmodified	_LLSGFISA_					0	0	0			REV__ENSG00000204084|ENST00000373024|INPP5B	REV__ENSG00000204084|ENST00000373024|INPP5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.232666015625	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.85277	1	8264	8264		25.45	0	1	4227600	+		31961	23454	21129	21139	36407	36407					0.042836124657469554
LLSGFISA	8	Unmodified	_LLSGFISA_					0	0	0			REV__ENSG00000204084|ENST00000373024|INPP5B	REV__ENSG00000204084|ENST00000373024|INPP5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.23236083984375	2	404.234179	806.453805	0.88498	0.00035774	-4.1951	-0.0016958	-3.3101	-0.0013381	404.2323708520731	84.87	3.8747	85.31	83.261	87.136	0.43967					162	94	4	0	0	0	0.89962	1	9890	9890		38.806	3.6054	1	2366300	+		31962	23454	21129	21139	36408	36408					0.042836124657469554
LLSGFISA	8	Unmodified	_LLSGFISA_					0	0	0			REV__ENSG00000204084|ENST00000373024|INPP5B	REV__ENSG00000204084|ENST00000373024|INPP5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.2320251464844	2	404.234179	806.453805	-0.39208	-0.00015849	-2.9155	-0.0011785	-3.3076	-0.001337	404.23288491550113	84.848	3.8677	85.296	83.349	87.217	0.44736					164	94	4	0	0	0	0.84341	1	9947	9947		24.203	2.5004	1	3295900	+		31963	23454	21129	21139	36409	36409					0.042836124657469554
LLSGKIKKKIP	11	Unmodified	_LLSGKIKKKIP_					0	0	0		nc|ENSG00000197603|Q9H799-5|CPLANE1;nc|ENSG00000197603|Q9H799|CPLANE1;ENSG00000197603|ENST00000651892|CPLANE1	nc|ENSG00000197603|Q9H799-5|CPLANE1	nc|ENSG00000197603|Q9H799-5|CPLANE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.8792724609375	2	612.923741	1223.83293	3.091	0.0018946	-1.9175	-0.0011753	1.1735	0.00071927	612.9221809905844	104.71	0.40069	104.67	104.45	104.85	-0.04039					15	9	2	0	0	0	0.17318	1	11528	11528		25.574	12.12	1	181450			31964	8182	21130	21140	36410	36410					0.2299655170143069
LLSGKIKKKIP	11	Unmodified	_LLSGKIKKKIP_					0	0	0		nc|ENSG00000197603|Q9H799-5|CPLANE1;nc|ENSG00000197603|Q9H799|CPLANE1;ENSG00000197603|ENST00000651892|CPLANE1	nc|ENSG00000197603|Q9H799-5|CPLANE1	nc|ENSG00000197603|Q9H799-5|CPLANE1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.87939453125	2	612.923741	1223.83293	1.1723	0.00071852	-1.1127	-0.00068198	0.059614	3.6539E-05	612.9246444774872	104.54	0.50162	104.71	104.26	104.77	0.17096					17	12	2	0	0	0	0.1729	1	11076	11076		34.173	14.176	1	454560			31965	8182	21130	21140	36411	36411					0.2299655170143069
LLSGKIKKKIP	11	Unmodified	_LLSGKIKKKIP_					0	0	0		nc|ENSG00000197603|Q9H799-5|CPLANE1;nc|ENSG00000197603|Q9H799|CPLANE1;ENSG00000197603|ENST00000651892|CPLANE1	nc|ENSG00000197603|Q9H799-5|CPLANE1	nc|ENSG00000197603|Q9H799-5|CPLANE1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.87939453125	2	612.923741	1223.83293	0.91306	0.00055963	3.1402	0.0019247	4.0533	0.0024844	612.9276641814926	104.41	0.27155	104.53	104.36	104.63	0.11684					13	6	3	0	0	0	0.17478	1	11092	11092		40.778	14.085	1	263690			31966	8182	21130	21140	36412	36412					0.2299655170143069
LLSGLLVN	8	Unmodified	_LLSGLLVN_					0	0	0			REV__nc|ENSG00000163491|Q6ZWH5-4|NEK10	REV__nc|ENSG00000163491|Q6ZWH5-4|NEK10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	414.76171875	2	414.763104	827.511654	-0.18703	-7.7573E-05	-3.202	-0.0013281	-3.389	-0.0014056	414.7617349673395	88.474	3.4521	88.542	87.228	90.68	0.068161					244	80	5	0	0	0	0.92973	1	8956	8956		50.025	7.5501	1	13272000	+		31967	20922	21131	21141	36413	36413					0.09099874391188223
LLSGLLVN	8	Unmodified	_LLSGLLVN_					0	0	0			REV__nc|ENSG00000163491|Q6ZWH5-4|NEK10	REV__nc|ENSG00000163491|Q6ZWH5-4|NEK10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	414.7616882324219	2	414.763104	827.511654	-1.8105	-0.00075094	-1.5324	-0.00063559	-3.343	-0.0013865	414.7624144330171	88.215	3.3838	88.416	87.026	90.41	0.20114					235	79	5	0	0	0	0.86791	1	8790	8790		28.254	0	1	11466000	+		31968	20922	21131	21141	36414	36414					0.09099874391188223
LLSGMFLF	8	Unmodified	_LLSGMFLF_					0	0	0		nc|ENSG00000138771|Q8TF72-2|SHROOM3	nc|ENSG00000138771|Q8TF72-2|SHROOM3	nc|ENSG00000138771|Q8TF72-2|SHROOM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25408935546875	2	464.254057	926.493561	-1.0566	-0.00049054	0.98159	0.00045571	-0.075022	-3.4829E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.91005	1	8146	8146		42.474	3.2216	1	1603800			31969	14954	21132	21142	36415	36415					0.027374161448278755
LLSGNRTEAA	10	Unmodified	_LLSGNRTEAA_					0	0	0		ENST00000583983.1_1_17:80008593-80008968:+|nuORF	ENST00000583983.1_1_17:80008593-80008968:+|nuORF	ENST00000583983.1_1_17:80008593-80008968:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3138427734375	2	516.277638	1030.54072	-1.562	-0.00080641	-3.7629	-0.0019427	-5.3248	-0.0027491	516.7777638406063	98.971	0.34024	99.157	98.898	99.238	0.18582					12	7	2	0	0	0	0.37624	1	10201	10201		25.574	0	1	108780			31970	14127	21133	21143	36416	36416					0.026673669495039576
LLSGPGRR	8	Unmodified	_LLSGPGRR_					0	0	0		ENSG00000114735|ENST00000232854|HEMK1;ENST00000482974.1_1_3:50608553-50608853:+|nuORF	ENSG00000114735|ENST00000232854|HEMK1	ENSG00000114735|ENST00000232854|HEMK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2616882324219	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.80706	3	9401	9389;9401;9413		26.796	0	1	55300000			31971	2786	21134	21144	36417;36418;36419	36418					0.0755604405703707
LLSGPGRR	8	Unmodified	_LLSGPGRR_					0	0	0		ENSG00000114735|ENST00000232854|HEMK1;ENST00000482974.1_1_3:50608553-50608853:+|nuORF	ENSG00000114735|ENST00000232854|HEMK1	ENSG00000114735|ENST00000232854|HEMK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.26165771484375	2	428.261594	854.508634	0.64465	0.00027608	-0.51085	-0.00021878	0.1338	5.7301E-05	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.86288	1	9127	9127		26.796	0	1	40631000			31972	2786	21134	21144	36420	36420					0.0755604405703707
LLSGPGRR	8	Unmodified	_LLSGPGRR_					0	0	0		ENSG00000114735|ENST00000232854|HEMK1;ENST00000482974.1_1_3:50608553-50608853:+|nuORF	ENSG00000114735|ENST00000232854|HEMK1	ENSG00000114735|ENST00000232854|HEMK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.26153564453125	2	428.261594	854.508634	1.2297	0.00052665	-1.0776	-0.00046151	0.1521	6.5138E-05	428.26104076888095	90.552	2.3243	91.003	90.412	92.737	0.45058					198	55	5	0	0	0	0.86288	1	10685	10685		26.796	0	1	32404000			31973	2786	21134	21144	36421	36421					0.0755604405703707
LLSGPRTSASA	11	Unmodified	_LLSGPRTSASA_					0	0	0			REV__ENSG00000129173|ENST00000250024|E2F8	REV__ENSG00000129173|ENST00000250024|E2F8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2928466796875	2	530.293288	1058.57202	-1.5163	-0.00080409	1.7205	0.00091237	0.2042	0.00010828	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.69931	1	9193	9193		31.634	1.1306	1	1686700	+		31974	18808	21135	21145	36422	36422					0.04507939983614051
LLSGRDPR	8	Unmodified	_LLSGRDPR_					0	0	0		ENSG00000206422|ENST00000383467|LRRC30	ENSG00000206422|ENST00000383467|LRRC30	ENSG00000206422|ENST00000383467|LRRC30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26141357421875	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.88944	1	8508	8508		57.811	13.694	1	4511100			31975	8556	21136	21146	36423	36423					0.054357228488470355
LLSGRGPR	8	Unmodified	_LLSGRGPR_					0	0	0			REV__ENST00000566774.1_1_16:68264768-68266536:-|nuORF	REV__ENST00000566774.1_1_16:68264768-68266536:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.26153564453125	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.85277	1	9424	9424		25.45	1.2474	1	52688000	+		31976	28874	21137	21147	36424	36424					0.0755604405703707
LLSGRRLE	8	Unmodified	_LLSGRRLE_					0	0	0		ENST00000368366.5_1_1:155217575-155221373:-|nuORF;nc|ENSG00000160767|P81408-2|ENTREP3;nc|ENSG00000160767|P81408-3|ENTREP3;ENSG00000160767|ENST00000361361|ENTREP3;nc|ENSG00000160767|P81408-4|ENTREP3	ENST00000368366.5_1_1:155217575-155221373:-|nuORF	ENST00000368366.5_1_1:155217575-155221373:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28778076171875	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.85277	1	12246	12246		25.45	3.4903	1	3080300			31977	5604	21138	21148	36425	36425					0.0874858239999412
LLSGSLVIMV	10	Unmodified	_LLSGSLVIMV_					0	0	0			REV__ENSG00000136213|ENST00000618655|CHST12	REV__ENSG00000136213|ENST00000618655|CHST12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3141479492188	2	516.312103	1030.60965	1.791	0.00092474	1.8914	0.00097654	3.6824	0.0019013	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.84112	1	12000	12000		37.159	5.2042	1	24820000	+		31978	19295	21139	21149	36426	36426					0.09557314924882121
LLSGVAIIVF	10	Unmodified	_LLSGVAIIVF_					0	0	0		ENSG00000278505|ENST00000615133|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.31396484375	2	516.328611	1030.64267	-0.047238	-2.439E-05	0.54702	0.00028244	0.49978	0.00025805	516.3289992352147	99.327	0.74679	99.377	98.973	99.72	0.04982					28	17	4	0	0	0	0.37624	1	10533	10533		30.504	14.03	1	903800			31979	9030	21140	21150	36427	36427					0.1285726503922433
LLSGVAIIVF	10	Unmodified	_LLSGVAIIVF_					0	0	0		ENSG00000278505|ENST00000615133|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3138427734375	2	516.328611	1030.64267	2.8144	0.0014532	-4.3642	-0.0022533	-1.5497	-0.00080018	516.3266271371201	99.767	0.3914	99.714	99.607	99.999	-0.053741					12	8	2	0	0	0	0.37624	1	10827	10827		38.806	5.9937	1	152540			31980	9030	21140	21150	36428	36428					0.1285726503922433
LLSGVAIIVF	10	Unmodified	_LLSGVAIIVF_					0	0	0		ENSG00000278505|ENST00000615133|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3140869140625	2	516.328611	1030.64267	-0.25878	-0.00013362	-2.9446	-0.0015204	-3.2034	-0.001654	516.3268452308471	99.783	0.3929	99.998	99.897	100.29	0.21511					10	8	2	0	0	0	0.37624	1	10418	10418		38.806	14.603	1	45597			31981	9030	21140	21150	36429	36429					0.1285726503922433
LLSGVAIIVF	10	Unmodified	_LLSGVAIIVF_					0	0	0		ENSG00000278505|ENST00000615133|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.31396484375	2	516.328611	1030.64267	0.80496	0.00041562	-1.6345	-0.00084392	-0.82951	-0.0004283	516.3279138709793	99.219	0.36762	99.376	99.275	99.642	0.15659					15	8	3	0	0	0	0.37624	1	10327	10327		31.955	8.9124	1	369710			31982	9030	21140	21150	36430	36430					0.1285726503922433
LLSGVKLTL	9	Unmodified	_LLSGVKLTL_					0	0	0			REV__nc|ENSG00000108433|O14653-3|GOSR2	REV__nc|ENSG00000108433|O14653-3|GOSR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28759765625	2	472.312961	942.611368	-0.91774	-0.00043346	1.9435	0.00091792	1.0257	0.00048446	472.31487887113263	94.974	0.9445	95.205	94.984	95.928	0.23103					31	22	2	0	0	0	0.20789	1	9820	9820		26.693	8.3685	1	158140	+		31983	29769	21141	21151	36431	36431					0.13776692005137647
LLSGVLFHSS	10	Unmodified	_LLSGVLFHSS_					0	0	0		nc|ENSG00000111885|P33908-2|MAN1A1;ENSG00000111885|ENST00000368468|MAN1A1	nc|ENSG00000111885|P33908-2|MAN1A1	nc|ENSG00000111885|P33908-2|MAN1A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.293212890625	2	530.295299	1058.57605	-0.034361	-1.8221E-05	-3.4792	-0.001845	-3.5136	-0.0018632	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.77314	1	9463	9463		40.778	0	1	1852900			31984	2620	21142	21152	36432	36432					0.04910029477309763
LLSGYALA	8	Unmodified	_LLSGYALA_					0	0	0			REV__nc|ENSG00000101294|Q8TCT9|HM13	REV__nc|ENSG00000101294|Q8TCT9|HM13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.23309326171875	2	404.234179	806.453805	-1.2631	-0.0005106	-2.2404	-0.00090563	-3.5035	-0.0014162	404.2330856183434	82.529	2.4032	82.529	81.258	83.662	0					126	65	3	0	0	0	0.86791	1	7699	7699		28.254	0	1	248830	+		31985	17263	21143	21153	36433	36433					0.042836124657469554
LLSIGPELPKP	11	Unmodified	_LLSIGPELPKP_					0	0	0		ENSG00000278129|ENST00000621650|ZNF8	ENSG00000278129|ENST00000621650|ZNF8	ENSG00000278129|ENST00000621650|ZNF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3550415039062	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.7342	1	12934	12934		25.574	2.5316	1	3937500			31986	9027	21144	21154	36434	36434					0.1213201775105972
LLSIKPAS	8	Unmodified	_LLSIKPAS_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	414.7618408203125	2	414.763104	827.511654	-1.1711	-0.00048571	-2.0434	-0.00084752	-3.2144	-0.0013332	414.7622083520732	88.685	2.6185	88.685	88.073	90.692	0					180	60	5	0	0	0	0.89962	1	8509	8509		38.806	0	1	6770700			31987	8832	21145	21155	36435	36435					0.09099874391176854
LLSIRLVALR	10	Unmodified	_LLSIRLVALR_					0	0	0			REV__ENSG00000184925|ENST00000371633|LCN12	REV__ENSG00000184925|ENST00000371633|LCN12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	577.3660278320312	2	577.392608	1152.77066	0.87794	0.00050692	-1.9549	-0.0011288	-1.077	-0.00062184	577.3918244389553	102.13	0.19317	102.27	102.11	102.3	0.13523					6	4	2	0	0	0	0.37624	1	10739	10739		15.642	0	1	106870	+		31988	22713	21146	21156	36436	36436					0.20038825353117318
LLSISGKRSA	10	Unmodified	_LLSISGKRSA_					0	0	0		ENST00000518587.1_1_5:170814889-170819841:+|nuORF;nc|ENSG00000181163|P06748-3|NPM1;nc|ENSG00000181163|P06748-2|NPM1;ENSG00000181163|ENST00000296930|NPM1;ENST00000438918.1_1_2:204637659-204638058:-|nuORF	ENST00000518587.1_1_5:170814889-170819841:+|nuORF	ENST00000518587.1_1_5:170814889-170819841:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.314697265625	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86218	1	12462	12462		32.812	0	1	4038100			31989	7374	21147	21157	36437	36437					0.0994112074295117
LLSKFRIKF	9	Unmodified	_LLSKFRIKF_					0	0	0		nc|ENSG00000074803|Q13621-3|SLC12A1;ENSG00000074803|ENST00000380993|SLC12A1	nc|ENSG00000074803|Q13621-3|SLC12A1	nc|ENSG00000074803|Q13621-3|SLC12A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8170166015625	2	576.368601	1150.72265	-0.17174	-9.8988E-05	1.5062	0.00086812	1.3344	0.00076913	576.3694061920876	55.494	1.3498	55.467	54.759	56.109	-0.027279					61	36	2	0	0	0	0.20789	1	5139	5139		34.173	11.13	1	121910			31990	1315	21148	21158	36438	36438					0.15331751433086538
LLSKFRIKF	9	Unmodified	_LLSKFRIKF_					0	0	0		nc|ENSG00000074803|Q13621-3|SLC12A1;ENSG00000074803|ENST00000380993|SLC12A1	nc|ENSG00000074803|Q13621-3|SLC12A1	nc|ENSG00000074803|Q13621-3|SLC12A1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	576.368601	1150.72265	-0.94919	-0.00054708	2.2569	0.0013008	1.3077	0.0007537	576.3697241970847	55.56	1.1746	55.549	55.01	56.184	-0.010132	0.041146	0.00045116	NaN	66.429	43	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98045			31991	1315	21148	21158							0.15331751433086538
LLSKMVVGQ	9	Unmodified	_LLSKMVVGQ_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A;nc|ENSG00000071909|Q8WXR4-5|MYO3B;ENST00000438642.6_1_2:171034716-171400468:+|nuORF;nc|ENSG00000071909|Q8WXR4-6|MYO3B;ENST00000409940.6_1_2:171034716-171376051:+|nuORF;nc|ENSG00000071909|Q8WXR4-3|MYO3B;nc|ENSG00000071909|Q8WXR4-2|MYO3B;nc|ENSG00000071909|Q8WXR4-4|MYO3B;ENSG00000071909|ENST00000408978|MYO3B;nc|ENSG00000071909|Q8WXR4-7|MYO3B	ENSG00000095777|ENST00000642920|MYO3A;nc|ENSG00000071909|Q8WXR4-5|MYO3B	nc|ENSG00000071909|Q8WXR4-5|MYO3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7907409667969	2	487.788795	973.563038	-0.085708	-4.1808E-05	3.6076	0.0017597	3.5219	0.0017179	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.77696	1	8060	8060		31.53	3.6476	1	514950			31992	11754;1733	21149	21159	36439	36439					0.07519875093601058
LLSKRQVDIH	10	Unmodified	_LLSKRQVDIH_					0	0	0		nc|ENSG00000132972|Q9BXT8-4|RNF17;ENSG00000132972|ENST00000255324|RNF17	nc|ENSG00000132972|Q9BXT8-4|RNF17	nc|ENSG00000132972|Q9BXT8-4|RNF17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5748291015625	3	403.575178	1207.70371	-0.15272	-6.1634E-05	-1.1844	-0.00047801	-1.3372	-0.00053965	403.57482141632175	80.779	1.0749	81.306	80.78	81.855	0.52676					103	25	6	0	0	0	0.86225	1	9383	9383		32.751	0	1	21414000			31993	3847	21150	21160	36440	36440					0.10816170071370834
LLSLALISD	9	Unmodified	_LLSLALISD_					0	0	0		nc|ENSG00000121933|P0DMS9|TMIGD3;ENSG00000121933|ENST00000369716|TMIGD3	nc|ENSG00000121933|P0DMS9|TMIGD3	nc|ENSG00000121933|P0DMS9|TMIGD3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7934875488281	2	472.786776	943.558998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.62	1	116.61	116.11	117.11	-0.014999								0	0	0	0.30053	1	13985	13985		30.504	0	1				31994	3202	21151	21161	36441	36441					0.08496108871520391
LLSLFKVVF	9	Unmodified	_LLSLFKVVF_					0	0	0			REV__nc|ENSG00000171509|Q9HBX9-5|RXFP1	REV__nc|ENSG00000171509|Q9HBX9-5|RXFP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.340087890625	2	533.338978	1064.6634	-0.0064483	-3.4392E-06	2.1801	0.0011627	2.1736	0.0011593	533.3400284044101	98.996	2.9551	99.219	98.699	101.65	0.22262					166	70	4	0	0	0	0.7932	1	10326	10326		17.365	4.4058	1	2531600	+		31995	21744	21152	21162	36442	36442					0.133658554188969
LLSLGLFD	8	Unmodified	_LLSLGLFD_					0	0	0			REV__MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|27|3|sense	REV__MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|27|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2457580566406	2	439.255111	876.49567	1.5601	0.00068527	-2.1843	-0.00095946	-0.62422	-0.00027419	439.2538565037537	106.03	0.66983	106.16	105.79	106.46	0.12742					46	24	3	0	0	0	0.88915	1	12938	12938		35.201	5.3592	1	187220	+		31996	29646	21153	21163	36443	36443					0.05248168154287214
LLSLLAIPIV	10	Unmodified	_LLSLLAIPIV_					0	0	0			REV__nc|ENSG00000084734|Q14397|GCKR	REV__nc|ENSG00000084734|Q14397|GCKR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.35791015625	2	526.359911	1050.70527	0.23622	0.00012434	2.2547	0.0011868	2.4909	0.0013111	526.3609415708197	35.175	1.5308	35.281	34.617	36.148	0.10604					147	55	3	0	0	0	0.85438	1	1932	1932		16.473	0	1	1065400	+		31997	16881	21154	21164	36444	36444					0.1819441110740172
LLSLLAVSP	9	Unmodified	_LLSLLAVSP_					0	0	0		ENST00000442561.6_1_1:203734313-203734412:+|nuORF	ENST00000442561.6_1_1:203734313-203734412:+|nuORF	ENST00000442561.6_1_1:203734313-203734412:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7926940917969	2	456.791861	911.569169	0.050318	2.2985E-05	2.6739	0.0012214	2.7242	0.0012444	456.7929831409672	38.348	1.1506	38.32	37.435	38.586	-0.027843					79	26	4	0	0	0	0.7932	1	2596	2596		25.45	0	1	1618700			31998	11794	21155	21165	36445	36445					0.10984716596749422
LLSLLAVSP	9	Unmodified	_LLSLLAVSP_					0	0	0		ENST00000442561.6_1_1:203734313-203734412:+|nuORF	ENST00000442561.6_1_1:203734313-203734412:+|nuORF	ENST00000442561.6_1_1:203734313-203734412:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79266357421875	2	456.791861	911.569169	-1.4626	-0.0006681	4.253	0.0019428	2.7904	0.0012746	456.7937012430135	38.803	1.6993	38.814	37.946	39.646	0.011173					92	39	3	0	0	0	0.58151	1	2628	2628		47.916	0	1	2267400			31999	11794	21155	21165	36446	36446					0.10984716596749422
LLSLLAVSP	9	Unmodified	_LLSLLAVSP_					0	0	0		ENST00000442561.6_1_1:203734313-203734412:+|nuORF	ENST00000442561.6_1_1:203734313-203734412:+|nuORF	ENST00000442561.6_1_1:203734313-203734412:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7925720214844	2	456.791861	911.569169	-1.2516	-0.0005717	4.1535	0.0018973	2.9019	0.0013256	456.7936304493402	37.846	1.122	37.863	37.475	38.597	0.016563					101	34	4	0	0	0	0.58151	1	2265	2265		47.916	0	1	1324300			32000	11794	21155	21165	36447	36447					0.10984716596749422
LLSLLEEAT	9	Unmodified	_LLSLLEEAT_					0	0	0		ENSG00000236699|ENST00000420470|ARHGEF38;nc|ENSG00000236699|Q9NXL2-1|ARHGEF38	ENSG00000236699|ENST00000420470|ARHGEF38	ENSG00000236699|ENST00000420470|ARHGEF38	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.78009033203125	2	494.78169	987.548827	-1.4939	-0.00073914	-1.3557	-0.00067077	-2.8496	-0.0014099	494.78084579093485	83.794	2.8854	83.932	82.379	85.265	0.13811					127	66	3	0	0	0	0.78058	1	8105	8105		30.504	0.6621	1	242900			32001	8756	21156	21166	36448	36448					0.0545550114627531
LLSLLFKSLL	10	Unmodified	_LLSLLFKSLL_					0	0	0		ENST00000540271.1_1_12:10461919-10462090:+|nuORF	ENST00000540271.1_1_12:10461919-10462090:+|nuORF	ENST00000540271.1_1_12:10461919-10462090:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.803955078125	2	573.878468	1145.74238	0.50638	0.0002906	1.9419	0.0011144	2.4483	0.001405	574.3795185653604	51.326	0.15963	51.361	51.245	51.405	0.034584					5	3	2	0	0	0	0.37624	1	4071	4071		19.104	4.2386	1	102780			32002	13492	21157	21167	36449	36449					0.17534082653173755
LLSLLKKE	8	Unmodified	_LLSLLKKE_					0	0	0			REV__ENST00000483888.6_1_6:75893836-75898119:-|nuORF	REV__ENST00000483888.6_1_6:75893836-75898119:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.31243896484375	2	472.312961	942.611368	-0.56246	-0.00026566	0.58347	0.00027558	0.021013	9.9246E-06	472.31308073619675	63.85	1.3072	64.404	63.961	65.268	0.55449					80	30	4	0	0	0	0.66521	1	6955	6955		68.787	0	1	1342600	+		32003	27501	21158	21168	36450	36450					0.13776692005137647
LLSLLKKYRI	10	Unmodified	_LLSLLKKYRI_					0	0	0			REV__ENSG00000095015|ENST00000399503|MAP3K1	REV__ENSG00000095015|ENST00000399503|MAP3K1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	623.92041015625	2	623.915916	1245.81728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.95	1	109.96	109.46	110.46	0.0060425								0	0	0	0.45132	1	11712	11712		23.042	12.777	1		+		32004	17051	21159	21169	36451	36451					0.20420265184407072
LLSLLRAVFF	10	Unmodified	_LLSLLRAVFF_					0	0	0		ENST00000335420.9_1_7:129772789-129772981:+|nuORF	ENST00000335420.9_1_7:129772789-129772981:+|nuORF	ENST00000335420.9_1_7:129772789-129772981:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3533325195312	2	589.868434	1177.72232	-0.067349	-3.9727E-05	4.4154	0.0026045	4.3481	0.0025648	589.870954309757	77.019	0.72578	77.588	77.453	78.179	0.56835					25	16	2	0	0	0	0.37624	1	8822	8822		21.96	2.8564	1	193060			32005	10158	21160	21170	36452	36452					0.14056331713209147
LLSLLRAVFF	10	Unmodified	_LLSLLRAVFF_					0	0	0		ENST00000335420.9_1_7:129772789-129772981:+|nuORF	ENST00000335420.9_1_7:129772789-129772981:+|nuORF	ENST00000335420.9_1_7:129772789-129772981:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	589.868434	1177.72232	-0.24681	-0.00014559	5.3219	0.0031392	5.0751	0.0029936	589.8715426083829	77.336	0.73947	77.741	77.361	78.101	0.40531	0.076596	0.00031719	NaN	21.96	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	335100			32006	10158	21160	21170							0.14056331713209147
LLSLMTGKK	9	Unmodified	_LLSLMTGKK_					0	0	0		ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-2|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.8038635253906	2	495.804445	989.594338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.105	1	65.491	64.991	65.991	0.38615								0	0	0	0.27974	1	7058	7058		38.806	1.7777	1				32007	5388	21161	21171	36453	36453					0.09912448127681728
LLSLNKQES	9	Unmodified	_LLSLNKQES_					0	0	0			REV__ENSG00000147234|ENST00000683843|FRMPD3	REV__ENSG00000147234|ENST00000683843|FRMPD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8984985351562	2	516.290214	1030.56587	0.51967	0.0002683	-0.68192	-0.00035207	-0.16226	-8.3772E-05	516.2896543897343	56.145	0.59909	56.704	56.541	57.141	0.55953					15	13	2	0	0	0	0.20789	1	5803	5803		26.693	0	1	416950	+		32008	20061	21162	21172	36454	36454					0.051814217520814054
LLSLPFWV	8	Unmodified	_LLSLPFWV_					0	0	0		nc|ENSG00000153485|Q8N6I4-2|LYSET;ENSG00000153485|ENST00000415050|LYSET;nc|ENSG00000153485|Q8N6I4-3|LYSET	nc|ENSG00000153485|Q8N6I4-2|LYSET	nc|ENSG00000153485|Q8N6I4-2|LYSET	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.790771484375	2	487.789121	973.56369	-0.085708	-4.1808E-05	2.9393	0.0014338	2.8536	0.001392	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.90024	1	8027	8027		39.021	9.18	1	514950			32009	5235	21163	21173	36455	36455					0.0758503780494948
LLSLPGHVRR	10	Unmodified	_LLSLPGHVRR_					0	0	0			REV__ENSG00000218891|ENST00000325421|ZNF579	REV__ENSG00000218891|ENST00000325421|ZNF579	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3575439453125	2	574.356557	1146.69856	-1.3728	-0.00078849	0.24135	0.00013862	-1.1315	-0.00064987	574.3566305310679	99.909	3.0439	100.08	98.131	101.18	0.17199					143	70	3	0	0	0	0.85466	1	10334	10334		20.947	0	1	243780	+		32010	23700	21164	21174	36456	36456					0.13107910999428896
LLSLPLLLTL	10	Unmodified	_LLSLPLLLTL_					0	0	0			REV__ENST00000553094.1_1_12:106461706-106477791:-|nuORF	REV__ENST00000553094.1_1_12:106461706-106477791:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3737182617188	2	548.373018	1094.73148	-0.93576	-0.00051314	3.3649	0.0018452	2.4292	0.0013321	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.85694	1	2456	2456		21.96	0	1	651720	+		32011	28637	21165	21175	36457	36457					0.18790680278902983
LLSLPLTILI	10	Unmodified	_LLSLPLTILI_					0	0	0		ENSG00000172289|ENST00000307552|OR10V1	ENSG00000172289|ENST00000307552|OR10V1	ENSG00000172289|ENST00000307552|OR10V1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3739013671875	2	548.373018	1094.73148	-0.26655	-0.00014617	2.6931	0.0014768	2.4265	0.0013306	548.374310727377	37.412	2.4822	37.359	36.203	38.685	-0.053558					161	55	4	0	0	0	0.88945	1	2473	2473		10.866	3.1753	1	654980			32012	6759	21166	21176	36458	36458					0.18790680278902983
LLSLPPLKQQ	10	Unmodified	_LLSLPPLKQQ_					0	0	0			REV__CON__P28800	REV__CON__P28800	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8539428710938	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.86589	1	10859	10859		29.15	1.2673	1	34546000	+	+	32013	15988	21167	21177	36459	36459					0.1340743747093711
LLSLPSSIF	9	Unmodified	_LLSLPSSIF_					0	0	0		ENST00000518738.1_1_8:104053131-104053194:+|nuORF	ENST00000518738.1_1_8:104053131-104053194:+|nuORF	ENST00000518738.1_1_8:104053131-104053194:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7897644042969	2	488.789318	975.564084	1.4412	0.00070445	-1.6239	-0.00079376	-0.18272	-8.931E-05	488.78836786844454	102.14	0.87674	102.4	102.03	102.91	0.26323					61	21	5	0	0	0	0.58151	1	12436	12436		47.916	0	1	1967000			32014	13120	21168	21178	36460	36460					0.07532412734155969
LLSLPSSIF	9	Unmodified	_LLSLPSSIF_					0	0	0		ENST00000518738.1_1_8:104053131-104053194:+|nuORF	ENST00000518738.1_1_8:104053131-104053194:+|nuORF	ENST00000518738.1_1_8:104053131-104053194:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7891540527344	2	488.789318	975.564084	2.6694	0.0013048	-2.8817	-0.0014085	-0.21227	-0.00010375	488.7877664062211	102.11	0.80855	102.41	102.13	102.94	0.29864					53	18	4	0	0	0	0.25826	1	12471	12471		68.485	0	1	2328000			32015	13120	21168	21178	36461	36461					0.07532412734155969
LLSLSPNHLF	10	Unmodified	_LLSLSPNHLF_					0	0	0		ENSG00000169855|ENST00000464233|ROBO1;nc|ENSG00000169855|Q9Y6N7-2|ROBO1	ENSG00000169855|ENST00000464233|ROBO1	ENSG00000169855|ENST00000464233|ROBO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.8240966796875	2	570.824224	1139.63389	-1.1206	-0.00063967	1.4828	0.00084642	0.36219	0.00020675	570.8249841435919	61.716	0.70389	61.707	61.602	62.306	-0.0094147					70	28	3	0	0	0	0.86348	1	5721	5721		31.53	2.3803	1	536910			32016	6529	21169	21179	36462	36462					0.06966291402750358
LLSLSTIPPA	10	Unmodified	_LLSLSTIPPA_					0	0	0			REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.30828857421875	2	506.307875	1010.6012	0.26704	0.0001352	1.0898	0.00055178	1.3569	0.00068698	506.30835501628917	44.614	1.9662	44.591	43.729	45.696	-0.023079					64	45	2	0	0	0	0.86452	2	3469	3469;3481		30.504	2.6214	1	414870	+		32017	16350	21170	21180	36463;36464	36463					0.09632084279905939
LLSLSTIPPA	10	Unmodified	_LLSLSTIPPA_					0	0	0			REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.30877685546875	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.261	1	44.269	43.769	44.769	0.0084534								0	0	0	0.45132	1	3109	3109		45.952	1.8352	1		+		32018	16350	21170	21180	36465	36465					0.09632084279905939
LLSLSTIPPA	10	Unmodified	_LLSLSTIPPA_					0	0	0			REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30902099609375	2	506.307875	1010.6012	0.29899	0.00015138	1.2838	0.00065	1.5828	0.00080139	506.3084880553604	44.091	1.7417	44.143	43.633	45.375	0.051537					61	41	3	0	0	0	0.86452	1	3109	3109		30.504	1.3541	1	407010	+		32019	16350	21170	21180	36466	36466					0.09632084279905939
LLSLSTIPPA	10	Unmodified	_LLSLSTIPPA_					0	0	0			REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3103332519531	2	506.307875	1010.6012	0.34662	0.0001755	1.6254	0.00082296	1.972	0.00099845	506.81007684679236	49.469	1.8985	49.512	48.558	50.457	0.04224					78	46	2	0	0	0	0.85939	2	3858	3816;3858		31.955	2.0956	1	315680	+		32020	16350	21170	21180	36467;36468	36468					0.09632084279905939
LLSLSTIPPA	10	Unmodified	_LLSLSTIPPA_					0	0	0			REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3080749511719	2	506.307875	1010.6012	0.40486	0.00020498	1.9335	0.00097895	2.3384	0.0011839	506.30888331142467	56.209	0.70053	56.309	55.673	56.373	0.099186					45	29	2	0	0	0	0.85939	1	4696	4696		23.042	1.0826	1	200050	+		32021	16350	21170	21180	36469	36469					0.09632084279905939
LLSLSTIPPA	10	Unmodified	_LLSLSTIPPA_					0	0	0			REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3085021972656	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.693	1	63.815	63.315	64.315	0.12252								0	0	0	0.45132	1	5588	5588		29.15	7.1897	1		+		32022	16350	21170	21180	36470	36470					0.09632084279905939
LLSLSTIPPA	10	Unmodified	_LLSLSTIPPA_					0	0	0			REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3058166503906	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.519	1	53.457	52.957	53.957	-0.062065								0	0	0	0.45132	1	4381	4381		29.15	1.2673	1		+		32023	16350	21170	21180	36471	36471					0.09632084279905939
LLSLSTPII	9	Unmodified	_LLSLSTPII_					0	0	0			REV__ENST00000294161.10_1_11:62496007-62496118:+|nuORF	REV__ENST00000294161.10_1_11:62496007-62496118:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.80548095703125	2	478.804968	955.595384	-0.92452	-0.00044266	3.6659	0.0017552	2.7414	0.0013126	478.80664804898805	39.433	1.9403	39.444	38.3	40.24	0.010708					89	52	2	0	0	0	0.7932	1	2435	2435		18.324	0	1	287670	+		32024	24690	21171	21181	36472	36472					0.11580985768239316
LLSLVTGLK	9	Unmodified	_LLSLVTGLK_					0	0	0		ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.3131408691406	2	472.312961	942.611368	-0.3636	-0.00017173	0.34621	0.00016352	-0.01739	-8.2134E-06	472.31297902590217	63.93	1.2331	64.316	63.919	65.152	0.38681					77	28	4	0	0	0	1.2037E-08	5	6896	6896;6909;6920;6932;6944		162.25	36.438	1	1360900			32025	12055	21172	21182	36473;36474;36475;36476;36477	36473					0.1377669200512628
LLSLVTGLK	9	Unmodified	_LLSLVTGLK_					0	0	0		ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.3128662109375	2	472.312961	942.611368	-0.56246	-0.00026566	0.58347	0.00027558	0.021013	9.9246E-06	472.31308073619675	63.85	1.3072	64.404	63.961	65.268	0.55449					80	30	4	0	0	0	2.5218E-39	3	6904	6904;6916;6928		200.16	38.259	1	1342600			32026	12055	21172	21182	36478;36479;36480	36478					0.1377669200512628
LLSPGVLVEV	10	Unmodified	_LLSPGVLVEV_					0	0	0		ENST00000392514.8_1_12:120638542-120639012:-|nuORF	ENST00000392514.8_1_12:120638542-120639012:-|nuORF	ENST00000392514.8_1_12:120638542-120639012:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3170776367188	2	513.3157	1024.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.943	1	53.937	53.437	54.437	-0.0053711								0	0	0	0.45132	1	4741	4741		26.693	1.2427	1				32027	11024	21173	21183	36481	36481					0.1055237079692688
LLSPLLASR	9	Unmodified	_LLSPLLASR_					0	0	0		nc|ENSG00000130363|Q86UC2|RSPH3;nc|ENSG00000130363|Q86UC2-2|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	nc|ENSG00000130363|Q86UC2|RSPH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.3084716796875	2	485.30821	968.601866	0.57726	0.00028015	-0.38029	-0.00018456	0.19697	9.5591E-05	485.3078756488088	16.562	0.32374	16.075	15.959	16.283	-0.48718					10	6	2	0	0	0	0.78058	1	158	158		30.504	5.0535	1	318290			32028	14904	21174	21184	36482	36482					0.11630923719621933
LLSPLLLLAV	10	Unmodified	_LLSPLLLLAV_					0	0	0			REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3614501953125	2	526.359911	1050.70527	1.057	0.00055634	1.5103	0.00079494	2.5672	0.0013513	526.3605624063631	36.088	1.9344	36.37	35.78	37.714	0.28173					146	47	5	0	0	0	0.86482	1	2764	2764		25.45	0	1	5773200	+		32029	16466	21175	21185	36483	36483					0.18194411107424457
LLSPLVVVRN	10	Unmodified	_LLSPLVVVRN_					0	0	0			REV__ENST00000336470.8_1_X:54556664-54559010:+|nuORF	REV__ENST00000336470.8_1_X:54556664-54559010:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.3532104492188	2	555.355691	1108.69683	-0.45068	-0.00025029	-3.7051	-0.0020576	-4.1558	-0.0023079	555.3535032243398	101.3	2.2254	101.3	100.77	103	0					164	54	4	0	0	0	0.86718	1	10288	10288		27.882	2.3082	1	2945100	+		32030	25192	21176	21186	36484	36484					0.14682857190814502
LLSPNQQIIQR	11	Unmodified	_LLSPNQQIIQR_					0	0	0			REV__nc|ENSG00000119318|P54727-2|RAD23B	REV__nc|ENSG00000119318|P54727-2|RAD23B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2558898925781	3	437.257738	1308.75138	-0.16089	-7.0349E-05	-0.76824	-0.00033592	-0.92913	-0.00040627	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.71803	1	10453	10453		28.577	3.4507	1	727380	+		32031	18349	21177	21187	36485	36485					0.10935824271541605
LLSPPFRQ	8	Unmodified	_LLSPPFRQ_					0	0	0			REV__ENST00000265753.12_1_7:73610469-73610616:+|nuORF	REV__ENST00000265753.12_1_7:73610469-73610616:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27813720703125	2	479.279452	956.544351	-0.097426	-4.6695E-05	-3.4378	-0.0016477	-3.5352	-0.0016944	479.2777564513445	97.555	2.08	97.612	96.988	99.068	0.056831					95	47	3	0	0	0	0.884	1	10308	10308		33.516	3.674	1	964120	+		32032	24499	21178	21188	36486	36486					0.0643408151404401
LLSPPLPTPS	10	Unmodified	_LLSPPLPTPS_					0	0	0		ENST00000532383.5_1_11:10828794-10828950:-|nuORF;ENST00000533485.1_1_11:10828341-10828950:-|nuORF	ENST00000532383.5_1_11:10828794-10828950:-|nuORF	ENST00000532383.5_1_11:10828794-10828950:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2347412109375	2	511.30005	1020.58555	0.1313	6.7133E-05	0.6689	0.00034201	0.8002	0.00040914	511.3003854290194	57.771	1.038	57.741	57.468	58.506	-0.029861					35	27	2	0	0	0	0.37624	1	5416	5416		14.865	3.9993	1	95931			32033	13375	21179	21189	36487	36487					0.07607797762852897
LLSPPLPTPS	10	Unmodified	_LLSPPLPTPS_					0	0	0		ENST00000532383.5_1_11:10828794-10828950:-|nuORF;ENST00000533485.1_1_11:10828341-10828950:-|nuORF	ENST00000532383.5_1_11:10828794-10828950:-|nuORF	ENST00000532383.5_1_11:10828794-10828950:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	511.30005	1020.58555	-0.040417	-2.0665E-05	0.18192	9.3017E-05	0.14151	7.2352E-05	511.3001323981886	57.765	0.7259	57.751	57.385	58.111	-0.013638	-0.0062147	-0.00044221	NaN	14.865	33	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91149			32034	13375	21179	21189							0.07607797762852897
LLSPPLPTPS	10	Unmodified	_LLSPPLPTPS_					0	0	0		ENST00000532383.5_1_11:10828794-10828950:-|nuORF;ENST00000533485.1_1_11:10828341-10828950:-|nuORF	ENST00000532383.5_1_11:10828794-10828950:-|nuORF	ENST00000532383.5_1_11:10828794-10828950:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	511.30005	1020.58555	-1.0187	-0.00052088	1.2469	0.00063755	0.22819	0.00011668	511.300673695307	57.747	0.66206	57.781	57.411	58.073	0.033905	0.023221	0.00064686	NaN	14.865	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104260			32035	13375	21179	21189							0.07607797762852897
LLSPPQMK	8	Unmodified	_LLSPPQMK_					0	0	0		ENST00000265742.7_1_7:91972403-91972535:+|nuORF	ENST00000265742.7_1_7:91972403-91972535:+|nuORF	ENST00000265742.7_1_7:91972403-91972535:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26422119140625	2	457.262413	912.510274	1.9734	0.00090236	2.6334	0.0012042	4.6068	0.0021065	457.26345594794816	95.279	1.7323	95.222	94.723	96.455	-0.057533					88	40	3	0	0	0	0.86288	1	10172	10172		26.796	0	1	826430			32036	9513	21180	21190	36488	36488					0.05051917030777986
LLSPWKIVAPQ	11	Unmodified	_LLSPWKIVAPQ_					0	0	0		ENST00000201031.2_1_20:55208493-55208538:+|nuORF	ENST00000201031.2_1_20:55208493-55208538:+|nuORF	ENST00000201031.2_1_20:55208493-55208538:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.9966430664062	2	626.376623	1250.73869	-0.28285	-0.00017717	1.6068	0.0010065	1.324	0.0008293	626.37761072617	55.66	1.104	55.633	54.977	56.081	-0.027275					41	28	2	0	0	0	0.17586	1	5015	5015		24.519	6.2571	1	62627			32037	9094	21181	21191	36489	36489					0.123354128793153
LLSQGQSRPT	10	Unmodified	_LLSQGQSRPT_					0	0	0			REV__ENST00000272224.4_1_2:20874358-20874706:+|nuORF	REV__ENST00000272224.4_1_2:20874358-20874706:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.7996215820312	2	543.798737	1085.58292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.802	1	76.85	76.35	77.35	0.047981								0	0	0	0.45132	1	7519	7519		32.812	3.6424	1		+		32038	24542	21182	21192	36490	36490					0.043553423578941874
LLSQRRPG	8	Unmodified	_LLSQRRPG_					0	0	0		ENST00000590867.5_1_19:6468097-6468284:-|nuORF	ENST00000590867.5_1_19:6468097-6468284:-|nuORF	ENST00000590867.5_1_19:6468097-6468284:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.77899169921875	2	463.780151	925.545748	0.21789	0.00010105	-2.3997	-0.0011129	-2.1818	-0.0010119	463.77880355938623	39.71	0.82539	39.799	39.611	40.437	0.088375					41	22	3	0	0	0	0.9295	1	2455	2455		55.504	2.1528	1	314080			32039	14265	21183	21193	36491	36491					0.079997156028071
LLSQRRPG	8	Unmodified	_LLSQRRPG_					0	0	0		ENST00000590867.5_1_19:6468097-6468284:-|nuORF	ENST00000590867.5_1_19:6468097-6468284:-|nuORF	ENST00000590867.5_1_19:6468097-6468284:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.779052734375	2	463.780151	925.545748	-0.87225	-0.00040453	-0.71824	-0.00033311	-1.5905	-0.00073764	463.7798455403882	38.467	1.081	38.99	38.633	39.714	0.52235					66	25	3	0	0	0	0.9295	1	3224	3224		55.504	5.4797	1	2514600			32040	14265	21183	21193	36492	36492					0.079997156028071
LLSRGLFAAS	10	Unmodified	_LLSRGLFAAS_					0	0	0		ENST00000558657.1_1_15:50087131-50087983:+|nuORF;nc|ENSG00000131263|Q9NVW2-2|RLIM;ENSG00000131263|ENST00000332687|RLIM	ENST00000558657.1_1_15:50087131-50087983:+|nuORF	ENST00000558657.1_1_15:50087131-50087983:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.263427734375	2	517.803291	1033.59203	0.39434	0.00020419	-4.1129	-0.0021297	-3.7185	-0.0019255	517.8014634356058	78.918	0.72203	79.328	78.76	79.482	0.4106					20	16	2	0	0	0	0.37624	1	9045	9045		19.997	0	1	62369			32041	13791	21184	21194	36493	36493					0.07657735714224145
LLSRLLGSGT	10	Unmodified	_LLSRLLGSGT_					0	0	0			REV__ENSG00000105755|ENST00000292147|ETHE1	REV__ENSG00000105755|ENST00000292147|ETHE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.80657958984375	2	508.808574	1015.60259	-0.055037	-2.8003E-05	-1.6702	-0.00084983	-1.7253	-0.00087783	508.8076940504988	90.104	1.2492	90.172	89.514	90.764	0.068703					64	28	4	0	0	0	0.86047	1	9228	9228		23.523	1.5628	1	1111600	+		32042	17568	21185	21195	36494	36494					0.09541718368666352
LLSRLLRKII	10	Unmodified	_LLSRLLRKII_					0	0	0			REV__ENST00000257181.9_1_1:52883535-52883676:+|nuORF	REV__ENST00000257181.9_1_1:52883535-52883676:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.879638671875	2	612.929357	1223.84416	0.28447	0.00017436	-1.7023	-0.0010434	-1.4178	-0.00086902	612.9288353118293	104.98	0.34307	105.02	104.87	105.21	0.039856					11	7	2	0	0	0	0.37624	1	11459	11459		16.473	0	1	39919	+		32043	24338	21186	21196	36495	36495					0.24119373795610954
LLSSASLLEV	10	Unmodified	_LLSSASLLEV_					0	0	0			REV__nc|ENSG00000092929|Q70J99-3|UNC13D	REV__nc|ENSG00000092929|Q70J99-3|UNC13D	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3046875	2	516.30279	1030.59103	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.499	1	62.499	61.999	62.999	0								0	0	0	0.45132	1	5463	5463		34.173	5.023	1		+		32044	17040	21187	21197	36496	36496					0.07695476554658853
LLSSITEIV	9	Unmodified	_LLSSITEIV_					0	0	0			REV__ENSG00000089154|ENST00000300648|GCN1	REV__ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7908935546875	2	487.792058	973.569563	-0.085708	-4.1808E-05	-3.0809	-0.0015028	-3.1666	-0.0015447	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.77546	1	8038	8038		31.955	2.1133	1	514950	+		32045	16963	21188	21198	36497	36497					0.0817209152594387
LLSSLSLVP	9	Unmodified	_LLSSLSLVP_					0	0	0			REV__ENSG00000231925|ENST00000434618|TAPBP	REV__ENSG00000231925|ENST00000434618|TAPBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7906799316406	2	464.789318	927.564084	-1.1101	-0.00051598	3.984	0.0018517	2.8738	0.0013357	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.7932	1	2099	2099		25.45	0	1	415400	+		32046	23766	21189	21199	36498	36498					0.0974041273415196
LLSSPAILL	9	Unmodified	_LLSSPAILL_					0	0	0			REV__ENST00000393067.7_1_11:111223088-111223172:-|nuORF	REV__ENST00000393067.7_1_11:111223088-111223172:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8025207519531	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.7932	1	3304	3304		18.324	0.95945	1	210360	+		32047	26043	21190	21200	36499	36499					0.11905003113804469
LLSSPSVLL	9	Unmodified	_LLSSPSVLL_					0	0	0		nc|ENSG00000042832|P01266-2|TG;ENSG00000042832|ENST00000220616|TG	nc|ENSG00000042832|P01266-2|TG	nc|ENSG00000042832|P01266-2|TG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.79058837890625	2	464.789318	927.564084	-0.072724	-3.3801E-05	3.0915	0.0014369	3.0188	0.0014031	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.7932	1	2063	2063		24.203	4.8428	1	297050			32048	939	21191	21201	36500	36500					0.09740412734140591
LLSSPSVLL	9	Unmodified	_LLSSPSVLL_					0	0	0		nc|ENSG00000042832|P01266-2|TG;ENSG00000042832|ENST00000220616|TG	nc|ENSG00000042832|P01266-2|TG	nc|ENSG00000042832|P01266-2|TG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.790771484375	2	464.789318	927.564084	-1.1101	-0.00051598	3.984	0.0018517	2.8738	0.0013357	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.78058	1	2110	2110		30.504	1.3541	1	415400			32049	939	21191	21201	36501	36501					0.09740412734140591
LLSSPSVLL	9	Unmodified	_LLSSPSVLL_					0	0	0		nc|ENSG00000042832|P01266-2|TG;ENSG00000042832|ENST00000220616|TG	nc|ENSG00000042832|P01266-2|TG	nc|ENSG00000042832|P01266-2|TG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7908630371094	2	464.789318	927.564084	0.1718	7.9849E-05	2.8678	0.0013329	3.0395	0.0014127	464.7905115336865	34.402	1.3055	34.346	33.931	35.236	-0.055149					140	57	3	0	0	0	0.76255	1	1790	1790		35.618	6.4687	1	289420			32050	939	21191	21201	36502	36502					0.09740412734140591
LLSTAPRAA	9	Unmodified	_LLSTAPRAA_					0	0	0			REV__ENST00000581302.5_1_18:21033283-21057068:+|nuORF	REV__ENST00000581302.5_1_18:21033283-21057068:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.26995849609375	2	450.269084	898.523616	1.3279	0.0005979	1.9209	0.00086491	3.2488	0.0014628	450.26977588030314	109.75	0.98418	109.82	109.68	110.66	0.06794					48	38	2	0	0	0	0.74721	1	13288	13288		37.159	11.585	1	742510	+		32051	29047	21192	21202	36503	36503					0.07029491134369437
LLSTIVLAS	9	Unmodified	_LLSTIVLAS_					0	0	0		ENST00000409465.5_1_2:191878499-191878559:-|nuORF	ENST00000409465.5_1_2:191878499-191878559:-|nuORF	ENST00000409465.5_1_2:191878499-191878559:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	458.7873229980469	2	458.789318	915.564084	-1.0758	-0.00049355	-2.797	-0.0012832	-3.8728	-0.0017768	458.7880145411106	93.372	3.7853	93.372	92.851	96.637	0					181	88	4	0	0	0	0.77546	1	9211	9211		31.955	2.1133	1	6725700			32052	11310	21193	21203	36504	36504					0.10292412734133904
LLSTKLEL	8	Unmodified	_LLSTKLEL_					0	0	0			REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	458.78741455078125	2	458.789318	915.564084	-1.0758	-0.00049355	-2.797	-0.0012832	-3.8728	-0.0017768	458.7880145411106	93.372	3.7853	93.372	92.851	96.637	0					181	88	4	0	0	0	0.884	1	9235	9235		33.516	0	1	6725700	+		32053	16419	21194	21204	36505	36505					0.10292412734122536
LLSTKLEL	8	Unmodified	_LLSTKLEL_					0	0	0			REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.78790283203125	2	458.789318	915.564084	-0.56463	-0.00025905	-2.7803	-0.0012756	-3.3449	-0.0015346	458.7879697200244	92.862	1.6326	93.312	92.732	94.365	0.44989					129	38	4	0	0	0	0.89962	1	11110	11110		38.806	0	1	6441800	+		32054	16419	21194	21204	36506	36506					0.10292412734122536
LLSTPIEQ	8	Unmodified	_LLSTPIEQ_					0	0	0			REV__ENSG00000168924|ENST00000302787|LETM1	REV__ENSG00000168924|ENST00000302787|LETM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7541809082031	2	450.755475	899.496398	0.58167	0.00026219	-3.5127	-0.0015834	-2.9311	-0.0013212	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.89962	1	7766	7766		38.806	6.8513	1	285810	+		32055	21534	21195	21205	36507	36507					0.042629628033296285
LLSTPIRVLKR	11	Unmodified	_LLSTPIRVLKR_					0	0	0			REV__ENST00000460343.5_1_3:53260493-53260973:-|nuORF	REV__ENST00000460343.5_1_3:53260493-53260973:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3924560546875	2	648.429722	1294.84489	2.6464	0.001716	-3.0012	-0.0019461	-0.35478	-0.00023005	648.4276374298848	106.54	0.21436	106.51	106.45	106.66	-0.034134					5	4	2	0	0	0	0.17564	1	11780	11780		20.947	10.682	1	51461	+		32056	27001	21196	21206	36508	36508					0.2092616844463464
LLSTQFKLDL	10	Unmodified	_LLSTQFKLDL_					0	0	0			REV__ENST00000298556.7_1_X:133632445-133632670:+|nuORF	REV__ENST00000298556.7_1_X:133632445-133632670:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3425903320312	2	589.344989	1176.67542	-0.65315	-0.00038493	-3.1619	-0.0018634	-3.815	-0.0022484	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.85981	1	9672	9672		35.152	4.8343	1	5584100	+		32057	24735	21197	21207	36509	36509					0.09415427371436635
LLSTRTPR	8	Unmodified	_LLSTRTPR_					0	0	0			REV__nc|ENSG00000143702|Q5SW79-2|CEP170	REV__nc|ENSG00000143702|Q5SW79-2|CEP170	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28668212890625	2	472.287808	942.561064	-0.10759	-5.0814E-05	1.138	0.00053746	1.0304	0.00048665	472.2885582597605	102.46	1.3693	102.48	101.69	103.06	0.01989					55	32	3	0	0	0	0.87064	1	10996	10996		29.15	3.6994	1	278200	+		32058	19834	21198	21208	36510	36510					0.0874858239999412
LLSTVVTPD	9	Unmodified	_LLSTVVTPD_					0	0	0			REV__nc|ENSG00000073146|Q9BXT6-4|MOV10L1	REV__nc|ENSG00000073146|Q9BXT6-4|MOV10L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7676086425781	2	472.768583	943.522613	0.62555	0.00029574	-3.4442	-0.0016283	-2.8187	-0.0013326	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.77546	1	8262	8262		31.955	0	1	508030	+		32059	16667	21199	21209	36511	36511					0.04859231974796785
LLSVGKVIPPL	11	Unmodified	_LLSVGKVIPPL_					0	0	0			REV__ENST00000465079.1_1_1:155948753-155948843:-|nuORF	REV__ENST00000465079.1_1_1:155948753-155948843:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.8536987304688	2	568.376092	1134.73763	1.5144	0.00086075	3.997	0.0022718	5.5114	0.0031325	568.8785685097829	102.73	0.37782	102.77	102.46	102.83	0.043198					14	8	3	0	0	0	0.17318	1	11114	11114		32.812	13.452	1	85478	+		32060	27104	21200	21210	36512	36512					0.17565198510419577
LLSVLATVK	9	Unmodified	_LLSVLATVK_					0	0	0		ENSG00000116199|ENST00000263733|FAM20B	ENSG00000116199|ENST00000263733|FAM20B	ENSG00000116199|ENST00000263733|FAM20B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.31298828125	2	472.312961	942.611368	-0.56246	-0.00026566	0.58347	0.00027558	0.021013	9.9246E-06	472.31308073619675	63.85	1.3072	64.404	63.961	65.268	0.55449					80	30	4	0	0	0	0.36616	1	6941	6941		60.118	0	1	1342600			32061	2909	21201	21211	36513	36513					0.13776692005137647
LLSVLTPTL	9	Unmodified	_LLSVLTPTL_					0	0	0			REV__nc|ENSG00000113580|P04150-16|NR3C1	REV__nc|ENSG00000113580|P04150-16|NR3C1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.80615234375	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.658	1	42.663	42.163	43.163	0.0057487								0	0	0	0.31828	1	2884	2884		24.203	3.7209	1		+		32062	17999	21202	21212	36514	36514					0.11580985768216578
LLSVPVVSL	9	Unmodified	_LLSVPVVSL_					0	0	0			REV__ENST00000303758.7_1_X:68394206-68394332:+|nuORF	REV__ENST00000303758.7_1_X:68394206-68394332:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.800537109375	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3029	3029		16.473	0.83134	1	942760	+		32063	24804	21203	21213	36515	36515					0.11905003113804469
LLSVQQRN	8	Unmodified	_LLSVQQRN_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.278076171875	2	479.277441	956.540328	-0.097427	-4.6695E-05	0.75887	0.00036371	0.66144	0.00031701	479.2777564513445	97.555	2.08	97.612	96.988	99.068	0.056831					95	47	3	0	0	0	0.85277	1	10320	10320		25.45	0	1	964120	+		32064	21394	21204	21214	36516	36516					0.060319920203255606
LLSVQQRN	8	Unmodified	_LLSVQQRN_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27740478515625	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.90465	1	7730	7730		40.573	3.4135	1	1802300	+		32065	21394	21204	21214	36517	36517					0.060319920203255606
LLSVQRWQVSK	11	Unmodified	_LLSVQRWQVSK_					0	0	0		ENST00000372025.4_1_1:46153863-46156732:+|nuORF	ENST00000372025.4_1_1:46153863-46156732:+|nuORF	ENST00000372025.4_1_1:46153863-46156732:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.5968017578125	3	448.597983	1342.77212	1.0026	0.00044974	-4.2433	-0.0019035	-3.2407	-0.0014538	448.5960230906909	33.014	0.92749	33.225	32.851	33.778	0.21168					63	21	4	0	0	0	0.64964	1	2392	2392		38.714	3.5359	1	1860300			32066	10685	21205	21215	36518	36518					0.11444414651214174
LLSVRLHIMW	10	Unmodified	_LLSVRLHIMW_					0	0	0			REV__ENST00000542452.1_1_11:73727738-73744892:-|nuORF	REV__ENST00000542452.1_1_11:73727738-73744892:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3749389648438	2	634.370818	1266.72708	6.8448	0.0043422	2.6623	0.0016889	9.5072	0.0060311	634.3725377460627	112.61	0.83469	112.63	112.35	113.18	0.016953					37	29	2	0	0	0	0.84874	1	13639	13639		18.324	0.062328	1	45562	+		32067	28498	21206	21216	36519	36519					0.10438892584329551
LLSVSKRLH	9	Unmodified	_LLSVSKRLH_					0	0	0			REV__ENST00000527986.5_1_10:28813506-28821653:-|nuORF	REV__ENST00000527986.5_1_10:28813506-28821653:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8084716796875	2	526.832383	1051.65021	2.397	0.0012628	-0.38909	-0.00020499	2.0079	0.0010578	526.8324518273878	100.37	0.32321	100.71	100.65	100.98	0.34591					11	7	2	0	0	0	0.20789	1	12210	12210		71.296	11.002	1	123310	+		32068	28241	21207	21217	36520	36520					0.12645417359499334
LLSVVYVLPHR	11	Unmodified	_LLSVVYVLPHR_					0	0	0			REV__nc|ENSG00000149305|O95264-2|HTR3B	REV__nc|ENSG00000149305|O95264-2|HTR3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.39697265625	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.7434	1	12330	12330		23.523	0	1	2297700	+		32069	20161	21208	21218	36521	36521					0.14054504144928615
LLSWLEKLS	9	Unmodified	_LLSWLEKLS_					0	0	0			REV__nc|ENSG00000153922|O14646-2|CHD1;REV__ENSG00000173575|ENST00000394196|CHD2	REV__ENSG00000173575|ENST00000394196|CHD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.3328857421875	2	544.82115	1087.62775	3.1339	0.0017074	3.5744	0.0019474	6.7082	0.0036548	545.3246795684624	98.479	1.1322	98.424	97.946	99.078	-0.054825					32	25	2	0	0	0	0.20789	1	10620	10620		27.882	6.9353	1	187300	+		32070	20362;21933	21209	21219	36522	36522					0.08743773171249813
LLTAAPLIRAE	11	Unmodified	_LLTAAPLIRAE_					0	0	0		ENSG00000166341|ENST00000299441|DCHS1	ENSG00000166341|ENST00000299441|DCHS1	ENSG00000166341|ENST00000299441|DCHS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.356689453125	2	584.358431	1166.70231	-0.075702	-4.4237E-05	-4.1912	-0.0024491	-4.2669	-0.0024934	584.3560423589818	92.438	3.1079	92.483	91.102	94.21	0.045448					194	73	3	0	0	0	0.7342	1	9645	9645		25.574	0	1	588330			32071	6180	21210	21220	36523	36523					0.12562535982578993
LLTALLLN	8	Unmodified	_LLTALLLN_					0	0	0		ENSG00000221826|ENST00000327495|PSG3;ENST00000599245.1_1_19:43528837-43530575:-|nuORF;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENST00000595138.1_1_19:43519232-43530599:-|nuORF;ENST00000597009.5_1_19:43236759-43244536:-|nuORF	ENSG00000221826|ENST00000327495|PSG3;ENST00000597009.5_1_19:43236759-43244536:-|nuORF	ENSG00000221826|ENST00000327495|PSG3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2514343261719	2	435.786579	869.558604	-1.5522	-0.00067643	-3.5717	-0.0015565	-5.1239	-0.0022329	435.784521111385	80.284	0.15633	80.421	80.358	80.515	0.13702					5	4	2	0	0	0	0.4196	1	7648	7648		12.207	0	1	29239			32072	8669;14344	21211	21221	36524	36524					0.11860733942341994
LLTAQPWMDDL	11	Unmodified	_LLTAQPWMDDL_					0	0	0		ENSG00000135249|ENST00000257700|RINT1	ENSG00000135249|ENST00000257700|RINT1	ENSG00000135249|ENST00000257700|RINT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2188415527344	3	434.884801	1301.63257	-1.4878	-0.00064703	2.1375	0.00092956	0.64966	0.00028253	435.2206745756891	66.925	1.6102	66.925	66.352	67.962	0					132	77	2	0	0	0	0.74022	1	5922	5922		24.232	0	1	249440			32073	3995	21212	21222	36525	36525					-0.006177107482926658
LLTCSCGQ	8	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))LLTC(Carbamidomethyl (C))SC(Carbamidomethyl (C))GQ_	LLTC(1)SC(1)GQ		LLTC(44)SC(44)GQ		1	2	0			REV__nc|ENSG00000006534|P43353-2|ALDH3B1	REV__nc|ENSG00000006534|P43353-2|ALDH3B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.7139892578125	2	490.712427	979.410302	1.1619	0.00057018	1.0916	0.00053566	2.2535	0.0011058	490.7130625039328	98.889	1.7535	99.25	98.566	100.32	0.36136					108	43	4	0	0	0	0.91472	3	11922	11922;11948;11960		53.351	16.323	1	2946000	+		32074	16103	21213	21223	36526;36527;36528	36526	213;214				-0.08022688365338126
LLTCSCGQ	8	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))LLTC(Carbamidomethyl (C))SC(Carbamidomethyl (C))GQ_					1	2	0			REV__nc|ENSG00000006534|P43353-2|ALDH3B1	REV__nc|ENSG00000006534|P43353-2|ALDH3B1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	490.712427	979.410302	-0.6395	-0.00031381	3.6061	0.0017695	2.9666	0.0014557	490.7139718741726	98.82	0.66742	99.043	98.699	99.367	0.22262	-0.12741	0.0014794	NaN	53.351	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135730	+		32075	16103	21213	21223			213;214				-0.08022688365338126
LLTCSCGQ	8	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))LLTC(Carbamidomethyl (C))SC(Carbamidomethyl (C))GQ_					1	2	0			REV__nc|ENSG00000006534|P43353-2|ALDH3B1	REV__nc|ENSG00000006534|P43353-2|ALDH3B1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	490.712427	979.410302	0.77771	0.00038163	2.2136	0.0010862	2.9913	0.0014679	490.71337760169575	99.068	0.57584	99.224	98.859	99.435	0.15659	0.054219	0.00011282	NaN	53.351	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118310	+		32076	16103	21213	21223			213;214				-0.08022688365338126
LLTCSCGQ	8	Acetyl (Protein N-term),2 Carbamidomethyl (C)	_(Acetyl (Protein N-term))LLTC(Carbamidomethyl (C))SC(Carbamidomethyl (C))GQ_					1	2	0			REV__nc|ENSG00000006534|P43353-2|ALDH3B1	REV__nc|ENSG00000006534|P43353-2|ALDH3B1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	490.712427	979.410302	-1.6452	-0.00080733	4.5043	0.0022103	2.8591	0.001403	490.71439490403975	98.978	0.62658	99.163	98.853	99.48	0.18582	-0.0067516	0.002361	NaN	53.351	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137950	+		32077	16103	21213	21223			213;214				-0.08022688365338126
LLTCVSLKL	9	Carbamidomethyl (C)	_LLTC(Carbamidomethyl (C))VSLKL_	LLTC(1)VSLKL		LLTC(42)VSLKL		0	1	0		ENST00000481541.1_1_2:85785894-85785960:-|nuORF	ENST00000481541.1_1_2:85785894-85785960:-|nuORF	ENST00000481541.1_1_2:85785894-85785960:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8209228515625	2	523.817553	1045.62055	2.3131	0.0012117	3.5987	0.0018851	5.9118	0.0030967	523.8194058340142	104.59	1.4884	104.78	103.64	105.13	0.18888					65	37	2	0	0	0	0.67345	1	12745	12745		42.396	11.892	1	239400			32078	12462	21214	21224	36529	36529	158				0.09956717299132833
LLTDRNLN	8	Unmodified	_LLTDRNLN_					0	0	0		ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27783203125	2	479.769448	957.524344	-0.71366	-0.00034239	-2.3711	-0.0011376	-3.0848	-0.00148	479.7666190113298	81.174	0.37345	81.673	81.58	81.953	0.49967					10	8	2	0	0	0	0.4196	1	9390	9390		24.203	0	1	79448			32079	8340	21215	21225	36530	36530					0.043882857834205424
LLTEKIIKKR	10	Unmodified	_LLTEKIIKKR_					0	0	0			REV__nc|ENSG00000150676|Q8IWF9-3|CCDC83	REV__nc|ENSG00000150676|Q8IWF9-3|CCDC83	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.59124755859375	3	414.614974	1240.82309	1.2799	0.00053065	2.2824	0.00094632	3.5623	0.001477	414.61574444364095	18.135	0.18547	17.658	17.518	17.703	-0.47694					5	3	2	0	0	0	0.37624	1	347	347		37.508	0	1	13215	+		32080	20217	21216	21226	36531	36531					0.21231363696074368
LLTFLSVPR	9	Unmodified	_LLTFLSVPR_					0	0	0			REV__ENST00000341307.6_1_11:63448974-63449103:+|nuORF	REV__ENST00000341307.6_1_11:63448974-63449103:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3035278320312	2	523.32386	1044.63317	-0.17647	-9.2352E-05	-0.59828	-0.00031309	-0.77475	-0.00040544	523.3227323464242	88.245	0.47552	88.447	88.226	88.701	0.20114					17	11	2	0	0	0	0.20789	1	8765	8765		34.173	0	1	105880	+		32081	25257	21217	21227	36532	36532					0.11263496753713298
LLTFRPALD	9	Unmodified	_LLTFRPALD_					0	0	0			REV__ENST00000482108.1_2_7:94296072-94296186:+|nuORF	REV__ENST00000482108.1_2_7:94296072-94296186:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3037109375	2	523.305667	1044.59678	-1.0823	-0.0005664	-2.8643	-0.0014989	-3.9466	-0.0020653	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.66686	1	10836	10836		42.864	3.6114	1	13160000	+		32082	27460	21218	21228	36533	36533					0.0762661985700106
LLTGGKSSRK	10	Unmodified	_LLTGGKSSRK_					0	0	0		nc|ENSG00000170921|Q9HCD6|TANC2;nc|ENSG00000170921|Q9HCD6-2|TANC2;ENSG00000170921|ENST00000689528|TANC2;nc|ENSG00000170921|Q9HCD6-3|TANC2;nc|ENSG00000170921|Q9HCD6-4|TANC2	nc|ENSG00000170921|Q9HCD6|TANC2	nc|ENSG00000170921|Q9HCD6|TANC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8207397460938	2	523.819473	1045.62439	2.3131	0.0012117	-0.066548	-3.4859E-05	2.2466	0.0011768	523.8194058340142	104.59	1.4884	104.78	103.64	105.13	0.18888					65	37	2	0	0	0	0.86218	1	12755	12755		32.812	0.85756	1	239400			32083	6624	21219	21229	36534	36534					0.1034052311722462
LLTGMVFF	8	Unmodified	_LLTGMVFF_					0	0	0			REV__ENST00000523468.5_1_6:157963626-158049550:+|nuORF	REV__ENST00000523468.5_1_6:157963626-158049550:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2527160644531	2	464.254057	926.493561	-1.0637	-0.00049381	0.70549	0.00032752	-0.35818	-0.00016629	464.25425647374504	80.528	1.4241	80.665	79.54	80.965	0.13702					81	45	3	0	0	0	0.87807	1	7694	7694		31.579	0	1	413450	+		32084	22034	21220	21230	36535	36535					0.027374161448278755
LLTGPQTL	8	Unmodified	_LLTGPQTL_					0	0	0		ENST00000527278.5_1_7:64389231-64389459:+|nuORF	ENST00000527278.5_1_7:64389231-64389459:+|nuORF	ENST00000527278.5_1_7:64389231-64389459:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.75115966796875	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.89494	1	7256	7256		37.159	3.6435	1	423780			32085	13282	21221	21231	36536	36536					0.06383284011531032
LLTGPTSPIA	10	Unmodified	_LLTGPTSPIA_					0	0	0		ENSG00000229859|ENST00000325558|PGA3;ENSG00000229183|ENST00000378149|PGA4;ENSG00000256713|ENST00000312403|PGA5	ENSG00000229859|ENST00000325558|PGA3	ENSG00000229859|ENST00000325558|PGA3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.283935546875	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.898	1	72.029	71.529	72.529	0.1301								0	0	0	0.45132	1	6573	6573		29.15	0.89528	1				32086	8725	21222	21232	36537	36537					0.06871224728763536
LLTGPTWTY	9	Unmodified	_LLTGPTWTY_					0	0	0			REV__nc|ENSG00000159082|O43426-4|SYNJ1	REV__nc|ENSG00000159082|O43426-4|SYNJ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2741088867188	2	526.276575	1050.5386	0.42062	0.00022136	-4.3064	-0.0022664	-3.8858	-0.002045	526.2742119410344	55.335	0.74729	55.903	55.616	56.363	0.56836					42	17	3	0	0	0	0.18566	2	5700	5679;5700		76.847	18.065	1	1627500	+		32087	20635	21223	21233	36538;36539	36539					0.015349382117165078
LLTGRLPAKNL	11	Unmodified	_LLTGRLPAKNL_					0	0	0			REV__nc|ENSG00000131233|P57773-2|GJA9	REV__nc|ENSG00000131233|P57773-2|GJA9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3822631835938	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.7434	1	2714	2714		23.523	3.5259	1	352020	+		32088	18939	21224	21234	36540	36540					0.15525931110846614
LLTGRLPAKNL	11	Unmodified	_LLTGRLPAKNL_					0	0	0			REV__nc|ENSG00000131233|P57773-2|GJA9	REV__nc|ENSG00000131233|P57773-2|GJA9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3816528320312	2	598.379697	1194.74484	-0.19423	-0.00011622	3.3027	0.0019763	3.1085	0.00186	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.72106	2	2937	2937;2994		28.081	1.5442	1	825320	+		32089	18939	21224	21234	36541;36542	36541					0.15525931110846614
LLTGRLPAKNL	11	Unmodified	_LLTGRLPAKNL_					0	0	0			REV__nc|ENSG00000131233|P57773-2|GJA9	REV__nc|ENSG00000131233|P57773-2|GJA9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	598.3800659179688	2	598.379697	1194.74484	0.35601	0.00021303	2.8174	0.0016859	3.1735	0.0018989	598.3813089320432	40.572	1.0575	40.654	40.231	41.288	0.081345					56	37	2	0	0	0	0.76699	1	2619	2619		18.262	1.7889	1	302330	+		32090	18939	21224	21234	36543	36543					0.15525931110846614
LLTGSLHTD	9	Unmodified	_LLTGSLHTD_					0	0	0		nc|ENSG00000185774|Q6PIL6-5|KCNIP4	nc|ENSG00000185774|Q6PIL6-5|KCNIP4	nc|ENSG00000185774|Q6PIL6-5|KCNIP4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8053894042969	2	478.756007	955.497461	0.019525	9.3478E-06	-0.021375	-1.0234E-05	-0.0018503	-8.8583E-07	478.7568403338542	40.131	0.22671	40.083	39.89	40.116	-0.04789					6	5	2	0	0	0	0.20789	1	2496	2496		17.365	3.5896	1	31739			32091	15155	21225	21235	36544	36544					0.017931771722260237
LLTGTTFLAPH	11	Unmodified	_LLTGTTFLAPH_					0	0	0			REV__ENST00000574902.5_1_16:3191344-3191665:+|nuORF	REV__ENST00000574902.5_1_16:3191344-3191665:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	585.8317260742188	2	585.829506	1169.64446	0.49853	0.00029205	0.81855	0.00047953	1.3171	0.00077158	585.8298665984416	57.52	1.1205	57.626	57.378	58.498	0.1055					94	54	2	0	0	0	0.65746	1	4876	4876		37.812	5.061	1	190780	+		32092	28979	21226	21236	36545	36545					0.06642274057185205
LLTGVVLPT	9	Unmodified	_LLTGVVLPT_					0	0	0			REV__ENST00000447654.5_1_6:34212859-34213069:+|nuORF	REV__ENST00000447654.5_1_6:34212859-34213069:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.790771484375	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.78536	1	3135	3135		29.15	4.9468	1	608260	+		32093	26823	21227	21237	36546	36546					0.10984716596738053
LLTHILGY	8	Unmodified	_LLTHILGY_					0	0	0			REV__ENSG00000184166|ENST00000641833|OR1D2	REV__ENSG00000184166|ENST00000641833|OR1D2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.737548828125	2	465.276378	928.538203	-0.49922	-0.00023227	3.2894	0.0015305	2.7902	0.0012982	465.2783432412042	53.333	0.37488	53.948	53.819	54.194	0.61436					12	8	3	0	0	0	0.4196	1	5397	5397		23.037	0	1	109880	+		32094	22650	21228	21238	36547	36547					0.07107563282522733
LLTHLLSHL	9	Unmodified	_LLTHLLSHL_					0	0	0			REV__ENSG00000171496|ENST00000641027|OR1L8	REV__ENSG00000171496|ENST00000641027|OR1L8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8207397460938	2	523.821484	1045.62842	2.3131	0.0012117	-3.9064	-0.0020462	-1.5932	-0.00083457	523.8194058340142	104.59	1.4884	104.78	103.64	105.13	0.18888					65	37	2	0	0	0	0.7932	1	12715	12715		25.45	1.2474	1	239400	+		32095	21739	21229	21239	36548	36548					0.1074261261094307
LLTHLPPPN	9	Unmodified	_LLTHLPPPN_					0	0	0			REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.290283203125	2	501.292559	1000.57057	-0.97974	-0.00049113	-3.1223	-0.0015652	-4.1021	-0.0020563	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.74721	1	7937	7937		37.159	1.5408	1	2111000	+		32096	25470	21230	21240	36549	36549					0.07030350685511166
LLTHLPPPN	9	Unmodified	_LLTHLPPPN_					0	0	0			REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2901611328125	2	501.292559	1000.57057	-0.94239	-0.00047241	-3.1642	-0.0015862	-4.1066	-0.0020586	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.78058	1	8715	8715		30.504	6.3009	1	6939200	+		32097	25470	21230	21240	36550	36550					0.07030350685511166
LLTHLPPPN	9	Unmodified	_LLTHLPPPN_					0	0	0			REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.29022216796875	2	501.292559	1000.57057	-0.52377	-0.00026256	-3.845	-0.0019275	-4.3688	-0.00219	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.78058	1	8525	8525		30.504	0	1	2929300	+		32098	25470	21230	21240	36551	36551					0.07030350685511166
LLTHLPPPN	9	Unmodified	_LLTHLPPPN_					0	0	0			REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904968261719	2	501.292559	1000.57057	-0.36653	-0.00018374	-3.8537	-0.0019318	-4.2202	-0.0021156	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.67345	1	9018	9018		42.396	0	1	9903700	+		32099	25470	21230	21240	36552	36552					0.07030350685511166
LLTHLPPPN	9	Unmodified	_LLTHLPPPN_					0	0	0			REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.290283203125	2	501.292559	1000.57057	-0.50774	-0.00025453	-3.8573	-0.0019337	-4.3651	-0.0021882	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.77546	1	8262	8262		31.955	1.4512	1	3014100	+		32100	25470	21230	21240	36553	36553					0.07030350685511166
LLTHLPPPN	9	Unmodified	_LLTHLPPPN_					0	0	0			REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.29052734375	2	501.292559	1000.57057	-1.4828	-0.00074334	-2.8745	-0.001441	-4.3573	-0.0021843	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.77546	1	8064	8064		31.955	4.0726	1	2793500	+		32101	25470	21230	21240	36554	36554					0.07030350685511166
LLTHLPPPN	9	Unmodified	_LLTHLPPPN_					0	0	0			REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2911682128906	2	501.292559	1000.57057	-0.86867	-0.00043546	-3.0512	-0.0015296	-3.9199	-0.001965	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.62081	2	9701	9701;9827		45.952	14.422	1	2445400	+		32102	25470	21230	21240	36555;36556	36555					0.07030350685511166
LLTHLPPPN	9	Unmodified	_LLTHLPPPN_					0	0	0			REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.290283203125	2	501.292559	1000.57057	-0.28392	-0.00014233	-3.9733	-0.0019918	-4.2572	-0.0021341	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.77546	1	10147	10147		31.955	0.42505	1	9038000	+		32103	25470	21230	21240	36557	36557					0.07030350685511166
LLTHLPPPN	9	Unmodified	_LLTHLPPPN_					0	0	0			REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	REV__ENST00000360156.11_1_X:118827247-118827316:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29034423828125	2	501.292559	1000.57057	-0.45423	-0.0002277	-3.8659	-0.001938	-4.3202	-0.0021657	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.74721	1	10060	10060		37.159	0.71236	1	9727400	+		32104	25470	21230	21240	36558	36558					0.07030350685511166
LLTHRGIPTR	10	Unmodified	_LLTHRGIPTR_					0	0	0		ENST00000546191.5_1_9:127064310-127074851:+|nuORF	ENST00000546191.5_1_9:127064310-127074851:+|nuORF	ENST00000546191.5_1_9:127064310-127074851:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3532104492188	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.12	1	117.09	116.59	117.59	-0.02433								0	0	0	0.45132	1	12972	12972		22.58	6.1065	1				32105	13587	21231	21241	36559	36559					0.1186360713677459
LLTHRGIPTR	10	Unmodified	_LLTHRGIPTR_					0	0	0		ENST00000546191.5_1_9:127064310-127074851:+|nuORF	ENST00000546191.5_1_9:127064310-127074851:+|nuORF	ENST00000546191.5_1_9:127064310-127074851:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3541259765625	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.86272	1	12507	12507		24.519	7.1542	1	3937500			32106	13587	21231	21241	36560	36560					0.1186360713677459
LLTIALEPG	9	Unmodified	_LLTIALEPG_					0	0	0			REV__ENSG00000198837|ENST00000361217|DENND4B	REV__ENSG00000198837|ENST00000361217|DENND4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.779541015625	2	463.781493	925.548434	-0.87225	-0.00040453	-3.6133	-0.0016758	-4.4855	-0.0020803	463.7798455403882	38.467	1.081	38.99	38.633	39.714	0.52235					66	25	3	0	0	0	0.28875	1	3199	3199		65.803	12.452	1	2514600	+		32107	23392	21232	21242	36561	36561					0.082681262171036
LLTIIKPD	8	Unmodified	_LLTIIKPD_					0	0	0			REV__nc|ENSG00000189079|Q68CP9-3|ARID2	REV__nc|ENSG00000189079|Q68CP9-3|ARID2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.792236328125	2	456.791861	911.569169	0.0047775	2.1823E-06	2.6923	0.0012298	2.6971	0.001232	456.7929932525735	51.113	0.88086	51.121	50.884	51.765	0.0077477					35	23	2	0	0	0	0.84341	1	4393	4393		24.203	2.5004	1	113290	+		32108	23063	21233	21243	36562	36562					0.10984716596749422
LLTIISYLDL	10	Unmodified	_LLTIISYLDL_					0	0	0		nc|ENSG00000153832|Q8NEA4-3|FBXO36;ENSG00000153832|ENST00000283946|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.354736328125	2	582.34974	1162.68493	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.05	1	116.03	115.53	116.53	-0.02433								0	0	0	0.45132	1	12843	12843		20.947	2.6225	1				32109	5246	21234	21244	36563	36563					0.11009195656947668
LLTIISYLDL	10	Unmodified	_LLTIISYLDL_					0	0	0		nc|ENSG00000153832|Q8NEA4-3|FBXO36;ENSG00000153832|ENST00000283946|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3545532226562	2	582.34974	1162.68493	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.4	1	117.38	116.88	117.88	-0.02433								0	0	0	0.45132	1	12994	12994		16.473	0	1				32110	5246	21234	21244	36564	36564					0.11009195656947668
LLTILTLI	8	Unmodified	_LLTILTLI_					0	0	0			REV__nc|ENSG00000148680|P34969-3|HTR7	REV__nc|ENSG00000148680|P34969-3|HTR7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.274169921875	2	450.312429	898.610306	1.3252	0.00059675	0.61088	0.00027509	1.9361	0.00087184	450.311580413659	93.012	0.44456	93.057	92.754	93.198	0.045448					16	10	2	0	0	0	0.4196	1	9725	9725		8.8223	0	1	136650	+		32111	20130	21235	21245	36565	36565					0.1569447763623657
LLTILTLI	8	Unmodified	_LLTILTLI_					0	0	0			REV__nc|ENSG00000148680|P34969-3|HTR7	REV__nc|ENSG00000148680|P34969-3|HTR7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.27447509765625	2	450.312429	898.610306	-0.40782	-0.00018365	0.76251	0.00034337	0.35469	0.00015972	450.3114520299261	92.848	0.32827	93.298	93.238	93.566	0.44988					10	7	2	0	0	0	0.4196	1	11121	11121		8.8223	0	1	35092	+		32112	20130	21235	21245	36566	36566					0.1569447763623657
LLTKFFML	8	Unmodified	_LLTKFFML_					0	0	0		ENSG00000158158|ENST00000377075|CNNM4	ENSG00000158158|ENST00000377075|CNNM4	ENSG00000158158|ENST00000377075|CNNM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8003234863281	2	506.798632	1011.58271	0.2762	0.00013998	4.1152	0.0020856	4.3914	0.0022255	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.85277	1	3439	3439		25.45	2.4077	1	416790			32113	5464	21236	21246	36567	36567					0.07738251104353822
LLTKGSTSK	9	Unmodified	_LLTKGSTSK_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.7801818847656	2	467.782025	933.549496	-2.0909	-0.00097809	3.6333	0.0016996	1.5424	0.00072152	467.78360708841086	18.133	0.19548	18.133	18.046	18.241	0					11	8	2	0	0	0	0.74721	1	277	277		37.159	10.363	1	59728			32114	4233	21237	21247	36568	36568					0.08006340586018723
LLTKLCVH	8	Carbamidomethyl (C)	_LLTKLC(Carbamidomethyl (C))VH_	LLTKLC(1)VH		LLTKLC(41)VH		0	1	0		ENSG00000099219|ENST00000339450|ERMP1;nc|ENSG00000099219|Q7Z2K6-2|ERMP1	ENSG00000099219|ENST00000339450|ERMP1	ENSG00000099219|ENST00000339450|ERMP1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2868347167969	2	492.288963	982.563372	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.86	1	110.98	110.48	111.48	0.11659								0	0	0	0.30045	1	11937	11937		40.573	7.057	1				32115	1749	21238	21248	36569	36569	25				0.07139294813453034
LLTKQRLVET	10	Unmodified	_LLTKQRLVET_					0	0	0		nc|ENSG00000152061|B7ZAP0|RABGAP1L;ENST00000469553.6_1_1:174927262-174959135:+|nuORF;nc|ENSG00000152061|Q5R372-7|RABGAP1L;nc|ENSG00000152061|Q5R372-8|RABGAP1L;nc|ENSG00000152061|Q5R372-6|RABGAP1L;nc|ENSG00000152061|Q5R372-5|RABGAP1L;ENSG00000152061|ENST00000681986|RABGAP1L	nc|ENSG00000152061|B7ZAP0|RABGAP1L	nc|ENSG00000152061|B7ZAP0|RABGAP1L	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9143371582031	3	400.915201	1199.72377	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.81	1	113.83	113.33	114.33	0.020027								0	0	0	0.45132	1	13741	13741		23.523	0	1				32116	5154	21239	21249	36570	36570					0.13189921011326078
LLTLAGVWS	9	Unmodified	_LLTLAGVWS_					0	0	0			REV__nc|ENSG00000174151|Q8N8Q1-5|CYB561D1	REV__nc|ENSG00000174151|Q8N8Q1-5|CYB561D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.2796325683594	2	480.28166	958.548768	-0.5111	-0.00024547	-1.4117	-0.00067803	-1.9228	-0.0009235	480.28072280797545	99.721	0.87345	99.768	99.422	100.3	0.047523					34	19	2	0	0	0	0.78058	1	10694	10694		30.504	2.6214	1	183690	+		32117	21976	21240	21250	36571	36571					0.0678354593695758
LLTLAPSP	8	Unmodified	_LLTLAPSP_					0	0	0			REV__ENSG00000179588|ENST00000319555|ZFPM1	REV__ENSG00000179588|ENST00000319555|ZFPM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24822998046875	2	406.249829	810.485105	-1.171	-0.0004757	-1.7314	-0.00070337	-2.9023	-0.0011791	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.86791	1	8702	8702		28.254	0	1	30016000	+		32118	22343	21241	21251	36572	36572					0.07228185499855044
LLTLCLTVVG	10	Unmodified	_LLTLCLTVVG_					0	0	0		ENSG00000121578|ENST00000393765|B4GALT4	ENSG00000121578|ENST00000393765|B4GALT4	ENSG00000121578|ENST00000393765|B4GALT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3142700195312	2	516.312103	1030.60965	2.7794	0.001435	0.50073	0.00025853	3.2801	0.0016935	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.84112	1	10984	10984		37.159	5.2042	1	67991000			32119	3188	21242	21252	36573	36573					0.09557314924882121
LLTLCLTVVG	10	Unmodified	_LLTLCLTVVG_					0	0	0		ENSG00000121578|ENST00000393765|B4GALT4	ENSG00000121578|ENST00000393765|B4GALT4	ENSG00000121578|ENST00000393765|B4GALT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3140869140625	2	516.312103	1030.60965	1.9037	0.0009829	1.7854	0.00092181	3.6891	0.0019047	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.84112	1	11884	11884		37.159	5.2042	1	22616000			32120	3188	21242	21252	36574	36574					0.09557314924882121
LLTLDENQ	8	Unmodified	_LLTLDENQ_					0	0	0			REV__nc|ENSG00000168658|Q502W6-5|VWA3B	REV__nc|ENSG00000168658|Q502W6-5|VWA3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.2480163574219	2	473.248015	944.481476	-0.25967	-0.00012289	0.32175	0.00015227	0.06208	2.9379E-05	473.2481063617417	28.965	1.9145	28.925	28.439	30.354	-0.039907					103	58	4	0	0	0	0.3646	1	1490	1490		85.359	0.44396	1	555530	+		32121	21509	21243	21253	36575	36575					0.007014709353370563
LLTLFISLSL	10	Unmodified	_LLTLFISLSL_					0	0	0			REV__ENSG00000066777|ENST00000262215|ARFGEF1	REV__ENSG00000066777|ENST00000262215|ARFGEF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3403930664062	2	560.354825	1118.6951	-1.127	-0.00063152	2.262	0.0012675	1.135	0.000636	560.856636980919	102.24	0.16219	102.26	102.12	102.28	0.01989					6	3	2	0	0	0	0.37624	1	10938	10938		15.642	0	1	267820	+		32122	16529	21244	21254	36576	36576					0.1404980338218138
LLTLFISLSL	10	Unmodified	_LLTLFISLSL_					0	0	0			REV__ENSG00000066777|ENST00000262215|ARFGEF1	REV__ENSG00000066777|ENST00000262215|ARFGEF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3402099609375	2	560.354825	1118.6951	0.8614	0.00048269	1.307	0.00073237	2.1684	0.0012151	560.3558606761732	102.12	0.62765	102.26	102.02	102.65	0.13523					22	14	2	0	0	0	0.37624	1	10774	10774		27.882	0	1	603810	+		32123	16529	21244	21254	36577	36577					0.1404980338218138
LLTLFISLSL	10	Unmodified	_LLTLFISLSL_					0	0	0			REV__ENSG00000066777|ENST00000262215|ARFGEF1	REV__ENSG00000066777|ENST00000262215|ARFGEF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3403930664062	2	560.354825	1118.6951	-1.4185	-0.00079487	4.0758	0.0022839	2.6573	0.001489	560.3574368820674	102.62	0.20889	102.75	102.69	102.9	0.13569					8	4	2	0	0	0	0.37624	1	10747	10747		15.642	0	1	191920	+		32124	16529	21244	21254	36578	36578					0.1404980338218138
LLTLFPVLHRS	11	Unmodified	_LLTLFPVLHRS_					0	0	0		ENST00000294189.10_2_3:52029896-52029950:-|nuORF	ENST00000294189.10_2_3:52029896-52029950:-|nuORF	ENST00000294189.10_2_3:52029896-52029950:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3923950195312	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.732	2	12687	12687;12793		26.063	8.5954	1	2297700			32125	9703	21245	21255	36579;36580	36579					0.14054504144928615
LLTLGKCIN	9	Unmodified	_LLTLGKCIN_					0	0	0		nc|ENSG00000138182|Q96Q89-4|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B	nc|ENSG00000138182|Q96Q89-4|KIF20B	nc|ENSG00000138182|Q96Q89-4|KIF20B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7903747558594	2	487.788795	973.563038	0.6235	0.00030414	2.5998	0.0012681	3.2233	0.0015723	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.76764	1	7842	7842		34.173	0.65696	1	479320			32126	4280	21246	21256	36581	36581					0.07519875093578321
LLTLGSPSPRG	11	Unmodified	_LLTLGSPSPRG_					0	0	0		ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.3175048828125	2	549.319306	1096.62406	-0.54475	-0.00029924	-2.4274	-0.0013334	-2.9721	-0.0016327	549.3179138519522	101.15	1.9875	101.19	100.7	102.69	0.031036					127	47	4	0	0	0	0.73893	1	10797	10797		24.519	1.4767	1	2171100			32127	10765	21247	21257	36582	36582					0.0796110339738334
LLTLGSPSPRG	11	Unmodified	_LLTLGSPSPRG_					0	0	0		ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3174438476562	2	549.319306	1096.62406	0.23279	0.00012788	-3.323	-0.0018254	-3.0902	-0.0016975	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.69995	1	10527	10527		31.53	1.2121	1	3004300			32128	10765	21247	21257	36583	36583					0.0796110339738334
LLTLIAKME	9	Unmodified	_LLTLIAKME_					0	0	0		ENST00000579764.5_1_18:21927721-21957397:-|nuORF	ENST00000579764.5_1_18:21927721-21957397:-|nuORF	ENST00000579764.5_1_18:21927721-21957397:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.312103	1030.60965	-0.68072	-0.00035146	4.0405	0.0020861	3.3597	0.0017347	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.76255	1	10416	10416		35.618	1.4457	1	39641000			32129	14091	21248	21258	36584	36584					0.09557314924882121
LLTLKLNF	8	Unmodified	_LLTLKLNF_					0	0	0			REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.3060302734375	2	481.307678	960.600803	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.041	1	31.039	30.539	31.539	-0.0022526								0	0	0	0.3037	1	1403	1403		18.324	0	1		+		32130	18928	21249	21259	36585	36585					0.1189270935069544
LLTLLIAVIV	10	Unmodified	_LLTLLIAVIV_					0	0	0		nc|ENSG00000149295|P14416-2|DRD2;ENSG00000149295|ENST00000362072|DRD2;nc|ENSG00000149295|P14416-3|DRD2;ENST00000540600.5_1_11:113285027-113346393:-|nuORF	nc|ENSG00000149295|P14416-2|DRD2	nc|ENSG00000149295|P14416-2|DRD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.717529296875	2	534.375561	1066.73657	0.27471	0.0001468	-2.6349	-0.001408	-2.3602	-0.0012612	534.374033287951	74.253	1.2641	74.209	73.986	75.251	-0.043877					74	41	2	0	0	0	0.37624	1	7307	7307		2.9294	0	1	113090			32131	5016	21250	21260	36586	36586					0.20586984141505127
LLTLLLFEGT	10	Unmodified	_LLTLLLFEGT_					0	0	0		ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3404541015625	2	560.336633	1118.65871	3.1377	0.0017581	3.0866	0.0017295	6.2243	0.0034877	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.86589	11	11163	11151;11163;11187;11199;11235;11247;11259;11270;11355;11490;11544		29.15	4.9468	1	83033000			32132	11575	21251	21261	36587;36588;36589;36590;36591;36592;36593;36594;36595;36596;36597	36588					0.1041292648549188
LLTLLLFEGT	10	Unmodified	_LLTLLLFEGT_					0	0	0		ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.34033203125	2	560.336633	1118.65871	3.1419	0.0017605	3.7325	0.0020915	6.8744	0.003852	560.338642834655	107.37	1.0063	107.33	106.84	107.84	-0.034134					51	23	3	0	0	0	0.86718	1	11922	11922		27.882	3.6795	1	826960			32133	11575	21251	21261	36598	36598					0.1041292648549188
LLTLLLFEGT	10	Unmodified	_LLTLLLFEGT_					0	0	0		ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3406372070312	2	560.336633	1118.65871	3.1463	0.001763	3.4316	0.0019229	6.5779	0.0036858	560.3384571607505	112.87	1.2169	112.84	112.7	113.91	-0.024811					58	33	2	0	0	0	0.86718	1	12539	12539		27.882	4.8398	1	1119600			32134	11575	21251	21261	36599	36599					0.1041292648549188
LLTLLLFEGT	10	Unmodified	_LLTLLLFEGT_					0	0	0		ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3408813476562	2	560.336633	1118.65871	3.1454	0.0017625	3.4672	0.0019428	6.6126	0.0037053	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.85251	1	13106	13106		19.997	1.6724	1	151040			32135	11575	21251	21261	36600	36600					0.1041292648549188
LLTLLLFEGT	10	Unmodified	_LLTLLLFEGT_					0	0	0		ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3435668945312	2	560.336633	1118.65871	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.07	1	114.09	113.59	114.59	0.020027								0	0	0	0.45132	1	13771	13771		16.473	0.83134	1				32136	11575	21251	21261	36601	36601					0.1041292648549188
LLTLLLFEGT	10	Unmodified	_LLTLLLFEGT_					0	0	0		ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	ENST00000427464.1_3_21:42801441-42804029:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3403930664062	2	560.336633	1118.65871	2.9009	0.0016255	3.4846	0.0019525	6.3855	0.003578	560.3384791854071	101.98	1.2376	102.3	101.86	103.1	0.32511					132	30	6	0	0	0	0.86589	1	12443	12443		29.15	1.2673	1	15824000			32137	11575	21251	21261	36602	36602					0.1041292648549188
LLTLLLLP	8	Unmodified	_LLTLLLLP_					0	0	0			REV__nc|ENSG00000124207|P55060-4|CSE1L	REV__nc|ENSG00000124207|P55060-4|CSE1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.7875061035156	2	448.314972	894.615391	-0.39178	-0.00017564	-3.0711	-0.0013768	-3.4629	-0.0015525	448.3133708078542	38.348	0.48755	38.87	38.633	39.121	0.52236					20	11	2	0	0	0	0.4196	1	3161	3161		9.4706	0	1	97956	+		32138	18569	21252	21262	36603	36603					0.16386781498852088
LLTLLLPLSL	10	Unmodified	_LLTLLLPLSL_					0	0	0		ENST00000553094.1_1_12:106461706-106477791:-|nuORF	ENST00000553094.1_1_12:106461706-106477791:-|nuORF	ENST00000553094.1_1_12:106461706-106477791:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3738403320312	2	548.373018	1094.73148	-0.014191	-7.7821E-06	2.2319	0.0012239	2.2178	0.0012162	548.374000997207	35.509	1.288	35.453	35.002	36.29	-0.055901					73	28	3	0	0	0	0.85694	1	2293	2293		21.96	0	1	330260			32139	13693	21253	21263	36604	36604					0.18790680278902983
LLTLLLPLSL	10	Unmodified	_LLTLLLPLSL_					0	0	0		ENST00000553094.1_1_12:106461706-106477791:-|nuORF	ENST00000553094.1_1_12:106461706-106477791:-|nuORF	ENST00000553094.1_1_12:106461706-106477791:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	548.373779296875	2	548.373018	1094.73148	0.27438	0.00015046	2.33	0.0012777	2.6044	0.0014282	548.3741056570226	37.106	1.654	37.206	36.174	37.827	0.099277					123	52	3	0	0	0	0.88945	1	2136	2136		10.866	0.6003	1	393850			32140	13693	21253	21263	36605	36605					0.18790680278902983
LLTLLVDLG	9	Unmodified	_LLTLLVDLG_					0	0	0			REV__nc|ENSG00000290649|Q8NH63|OR51H1	REV__nc|ENSG00000290649|Q8NH63|OR51H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.8039245605469	2	478.804968	955.595384	-1.5052	-0.00072068	2.5191	0.0012062	1.0139	0.00048547	478.80603662682483	40.745	0.82938	41.137	40.796	41.625	0.39209					62	23	3	0	0	0	0.62081	1	3496	3496		45.952	3.5558	1	3674000	+		32141	30295	21254	21264	36606	36606					0.11580985768227947
LLTLLVDLG	9	Unmodified	_LLTLLVDLG_					0	0	0			REV__nc|ENSG00000290649|Q8NH63|OR51H1	REV__nc|ENSG00000290649|Q8NH63|OR51H1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	478.804968	955.595384	-1.5052	-0.00072068	2.5191	0.0012062	1.0139	0.00048547	478.80603662682483	40.745	0.82938	41.137	40.796	41.625	0.39209	-0.15915	9.3406E-05	NaN	45.952	62	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3674000	+		32142	30295	21254	21264							0.11580985768227947
LLTLMKPTT	9	Unmodified	_LLTLMKPTT_					0	0	0		ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2226867675781	2	509.304278	1016.594	1.3458	0.00068541	1.9184	0.00097703	3.2641	0.0016624	509.30514882075573	92.786	1.3462	93.233	92.733	94.079	0.44661					81	31	3	0	0	0	0.20789	1	11043	11043		15.642	0	1	985270			32143	7762	21255	21265	36607	36607					0.08637028407815706
LLTLPPTT	8	Unmodified	_LLTLPPTT_					0	0	0		ENST00000554467.5_1_12:57625133-57626138:+|nuORF	ENST00000554467.5_1_12:57625133-57626138:+|nuORF	ENST00000554467.5_1_12:57625133-57626138:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2616271972656	2	428.262936	854.51132	-0.17868	-7.6523E-05	-2.7106	-0.0011609	-2.8893	-0.0012374	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.884	1	9411	9411		33.516	6.7195	1	52688000			32144	13720	21256	21266	36608	36608					0.07824454671310832
LLTLPPTT	8	Unmodified	_LLTLPPTT_					0	0	0		ENST00000554467.5_1_12:57625133-57626138:+|nuORF	ENST00000554467.5_1_12:57625133-57626138:+|nuORF	ENST00000554467.5_1_12:57625133-57626138:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.26165771484375	2	428.262936	854.51132	1.4286	0.0006118	-4.4022	-0.0018853	-2.9736	-0.0012735	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.86288	2	9628	9628;9688		26.796	3.7536	1	57042000			32145	13720	21256	21266	36609;36610	36609					0.07824454671310832
LLTLPPTT	8	Unmodified	_LLTLPPTT_					0	0	0		ENST00000554467.5_1_12:57625133-57626138:+|nuORF	ENST00000554467.5_1_12:57625133-57626138:+|nuORF	ENST00000554467.5_1_12:57625133-57626138:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.2615051269531	2	428.262936	854.51132	0.64464	0.00027608	-3.646	-0.0015614	-3.0014	-0.0012854	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.86791	1	9187	9187		28.254	1.4582	1	40631000			32146	13720	21256	21266	36611	36611					0.07824454671310832
LLTLQKSIH	9	Unmodified	_LLTLQKSIH_					0	0	0		ENSG00000008086|ENST00000623535|CDKL5;nc|ENSG00000008086|O76039-1|CDKL5	ENSG00000008086|ENST00000623535|CDKL5	ENSG00000008086|ENST00000623535|CDKL5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8079223632812	2	526.826766	1051.63898	2.1735	0.0011451	-1.6915	-0.00089114	0.48203	0.00025395	526.8268317443018	101.01	0.28564	101.31	101.09	101.37	0.2999					10	6	2	0	0	0	0.20499	1	12244	12244		71.877	20.542	1	110810			32147	734	21257	21267	36612	36612					0.11522595265364544
LLTLQTYATDL	11	Unmodified	_LLTLQTYATDL_					0	0	0		ENST00000427443.5_1_16:58550827-58552930:+|nuORF;ENST00000463954.1_1_16:58551888-58552930:+|nuORF;nc|ENSG00000103037|Q8TBK2-2|SETD6;ENSG00000103037|ENST00000219315|SETD6	ENST00000427443.5_1_16:58550827-58552930:+|nuORF	ENST00000427443.5_1_16:58550827-58552930:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3795166015625	2	626.345186	1250.67582	1.3727	0.00085977	3.7738	0.0023637	5.1464	0.0032234	626.3480370269577	105.59	0.37561	105.75	105.55	105.92	0.15924					24	9	4	0	0	0	0.1728	1	11280	11280		18.262	0	1	818500			32148	2045	21258	21268	36613	36613					0.06050802300592295
LLTLSGFG	8	Unmodified	_LLTLSGFG_					0	0	0		ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57476806640625	2	404.234179	806.453805	-0.088565	-3.5801E-05	-3.0611	-0.0012374	-3.1496	-0.0012732	404.232896022424	81.909	1.1732	82.409	82.188	83.361	0.49966					49	28	2	0	0	0	0.4196	1	9490	9490		12.959	4.1369	1	200860			32149	8508	21259	21269	36614	36614					0.04283612465769693
LLTLSLPLLL	10	Unmodified	_LLTLSLPLLL_					0	0	0			REV__ENSG00000163521|ENST00000295759|GLB1L	REV__ENSG00000163521|ENST00000295759|GLB1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.373779296875	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.88945	1	2431	2431		10.866	0	1	314410	+		32150	20928	21260	21270	36615	36615					0.18790680278902983
LLTLSLPLLL	10	Unmodified	_LLTLSLPLLL_					0	0	0			REV__ENSG00000163521|ENST00000295759|GLB1L	REV__ENSG00000163521|ENST00000295759|GLB1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.374267578125	2	548.373018	1094.73148	-0.26655	-0.00014617	2.6931	0.0014768	2.4265	0.0013306	548.374310727377	37.412	2.4822	37.359	36.203	38.685	-0.053558					161	55	4	0	0	0	0.91594	1	2568	2568		6.7355	0	1	654980	+		32151	20928	21260	21270	36616	36616					0.18790680278902983
LLTLSLSPL	9	Unmodified	_LLTLSLSPL_					0	0	0			REV__ENST00000522674.1_1_7:27228344-27228893:+|nuORF	REV__ENST00000522674.1_1_7:27228344-27228893:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80523681640625	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.7932	1	2536	2536		23.042	0	1	336090	+		32152	28132	21261	21271	36617	36617					0.11580985768239316
LLTLSLSPL	9	Unmodified	_LLTLSLSPL_					0	0	0			REV__ENST00000522674.1_1_7:27228344-27228893:+|nuORF	REV__ENST00000522674.1_1_7:27228344-27228893:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80560302734375	2	478.804968	955.595384	-1.7281	-0.00082743	3.3413	0.0015998	1.6132	0.00077242	478.806439205216	41.295	1.2034	41.295	40.815	42.018	0					75	35	3	0	0	0	0.7932	1	2758	2758		16.473	0	1	280900	+		32153	28132	21261	21271	36618	36618					0.11580985768239316
LLTLSLSPL	9	Unmodified	_LLTLSLSPL_					0	0	0			REV__ENST00000522674.1_1_7:27228344-27228893:+|nuORF	REV__ENST00000522674.1_1_7:27228344-27228893:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.806396484375	2	478.804968	955.595384	-1.2024	-0.0005757	4.0232	0.0019263	2.8208	0.0013506	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.74721	2	2829	2706;2829		37.159	0	1	361300	+		32154	28132	21261	21271	36619;36620	36620					0.11580985768239316
LLTLSPAP	8	Unmodified	_LLTLSPAP_					0	0	0		ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2485656738281	2	406.249829	810.485105	-1.171	-0.0004757	-1.7314	-0.00070337	-2.9023	-0.0011791	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.9159	1	8628	8628		44.531	0	1	30016000			32155	7887	21262	21272	36621	36621					0.07228185499843676
LLTLSPAP	8	Unmodified	_LLTLSPAP_					0	0	0		ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2485656738281	2	406.249829	810.485105	-1.1354	-0.00046124	-1.5216	-0.00061817	-2.657	-0.0010794	406.24912053143106	91.114	2.1144	91.114	90.563	92.677	0					101	49	3	0	0	0	0.86791	2	8889	8889;8926		33.516	3.674	1	849560			32156	7887	21262	21272	36622;36623	36622					0.07228185499843676
LLTLSPAP	8	Unmodified	_LLTLSPAP_					0	0	0		ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2481689453125	2	406.249829	810.485105	1.1516	0.00046786	-4.2235	-0.0017158	-3.0718	-0.0012479	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.89457	1	9476	9476		37.028	0	1	58759000			32157	7887	21262	21272	36624	36624					0.07228185499843676
LLTLSPAP	8	Unmodified	_LLTLSPAP_					0	0	0		ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2484436035156	2	406.249829	810.485105	-1.8141	-0.00073698	-1.2967	-0.0005268	-3.1108	-0.0012638	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.82464	2	8705	8684;8705		28.254	2.8041	1	42617000			32158	7887	21262	21272	36625;36626	36626					0.07228185499843676
LLTLSPAP	8	Unmodified	_LLTLSPAP_					0	0	0		ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.248779296875	2	406.249829	810.485105	-1.8094	-0.00073505	-0.74363	-0.0003021	-2.553	-0.0010372	406.2494235031066	90.628	2.0567	90.845	90.343	92.4	0.21736					110	49	3	0	0	0	0.86791	1	9085	9085		28.254	0	1	1054100			32159	7887	21262	21272	36627	36627					0.07228185499843676
LLTLSPAP	8	Unmodified	_LLTLSPAP_					0	0	0		ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24847412109375	2	406.249829	810.485105	0.62319	0.00025317	-3.6411	-0.0014792	-3.0179	-0.001226	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.86791	1	8822	8822		28.254	0	1	38001000			32160	7887	21262	21272	36628	36628					0.07228185499843676
LLTLSPAP	8	Unmodified	_LLTLSPAP_					0	0	0		ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24884033203125	2	406.249829	810.485105	0.64458	0.00026186	-3.2845	-0.0013343	-2.6399	-0.0010725	406.248379767224	90.786	2.0194	90.94	90.429	92.448	0.15388					81	48	3	0	0	0	0.81548	1	9143	9143		20.482	0	1	878080			32161	7887	21262	21272	36629	36629					0.07228185499843676
LLTLSPAP	8	Unmodified	_LLTLSPAP_					0	0	0		ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2485046386719	2	406.249829	810.485105	-1.9277	-0.00078311	-1.0996	-0.00044672	-3.0273	-0.0012298	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.86791	4	8757	8757;8793;8807;8831		28.254	0	1	31099000			32162	7887	21262	21272	36630;36631;36632;36633	36630					0.07228185499843676
LLTLTRAFP	9	Unmodified	_LLTLTRAFP_					0	0	0		ENST00000602024.5_1_19:53625730-53636129:-|nuORF	ENST00000602024.5_1_19:53625730-53636129:-|nuORF	ENST00000602024.5_1_19:53625730-53636129:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3137817382812	2	516.316035	1030.61752	-0.68072	-0.00035146	-3.5737	-0.0018451	-4.2544	-0.0021966	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.72402	1	10289	10289		38.806	0	1	39641000			32163	14394	21263	21273	36634	36634					0.10343210236646883
LLTLVNKHRN	10	Unmodified	_LLTLVNKHRN_					0	0	0		nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-6|NF1;ENSG00000196712|ENST00000358273|NF1;ENST00000579081.5_2_17:29626598-29701170:+|nuORF	nc|ENSG00000196712|P21359-2|NF1	nc|ENSG00000196712|P21359-2|NF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.365966796875	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.86718	1	11249	11249		27.882	3.3631	1	63350000			32164	8095	21264	21274	36635	36635					0.12459876308275852
LLTLVNKHRN	10	Unmodified	_LLTLVNKHRN_					0	0	0		nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-6|NF1;ENSG00000196712|ENST00000358273|NF1;ENST00000579081.5_2_17:29626598-29701170:+|nuORF	nc|ENSG00000196712|P21359-2|NF1	nc|ENSG00000196712|P21359-2|NF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.246826171875	3	403.247173	1206.71969	3.1806	0.0012826	-3.8089	-0.0015359	-0.62832	-0.00025337	403.2455898338112	104.57	4.2773	104.61	103.55	107.83	0.039864					310	101	5	0	0	0	0.85466	1	11382	11382		20.03	0	1	15278000			32165	8095	21264	21274	36636	36636					0.12459876308275852
LLTLVNKHRN	10	Unmodified	_LLTLVNKHRN_					0	0	0		nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-6|NF1;ENSG00000196712|ENST00000358273|NF1;ENST00000579081.5_2_17:29626598-29701170:+|nuORF	nc|ENSG00000196712|P21359-2|NF1	nc|ENSG00000196712|P21359-2|NF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.24676513671875	3	403.247173	1206.71969	-1.7912	-0.0007223	1.0466	0.00042203	-0.74462	-0.00030027	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.86444	1	11101	11101		14.694	0	1	20673000			32166	8095	21264	21274	36637	36637					0.12459876308275852
LLTLVNKHRN	10	Unmodified	_LLTLVNKHRN_					0	0	0		nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-6|NF1;ENSG00000196712|ENST00000358273|NF1;ENST00000579081.5_2_17:29626598-29701170:+|nuORF	nc|ENSG00000196712|P21359-2|NF1	nc|ENSG00000196712|P21359-2|NF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3666381835938	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.86763	1	12664	12664		26.693	3.1702	1	5984800			32167	8095	21264	21274	36638	36638					0.12459876308275852
LLTLVPVSWSA	11	Unmodified	_LLTLVPVSWSA_					0	0	0		ENSG00000165215|ENST00000395145|CLDN3	ENSG00000165215|ENST00000395145|CLDN3	ENSG00000165215|ENST00000395145|CLDN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3447265625	2	593.347532	1184.68051	-1.311	-0.00077786	-3.8239	-0.0022689	-5.1349	-0.0030468	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.69995	1	10885	10885		31.53	4.4825	1	3957400			32168	6061	21265	21275	36639	36639					0.0955573123405884
LLTMVLLFV	9	Unmodified	_LLTMVLLFV_					0	0	0		nc|ENSG00000179242|P55283-2|CDH4;ENSG00000179242|ENST00000614565|CDH4	nc|ENSG00000179242|P55283-2|CDH4	nc|ENSG00000179242|P55283-2|CDH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8267822265625	2	524.827389	1047.64023	1.2413	0.00065145	-2.2931	-0.0012035	-1.0518	-0.00055202	524.8261082044575	99.092	3.5228	99.14	98.41	101.93	0.047852					344	82	7	0	0	0	0.67235	3	10642	10570;10642;10714		42.474	1.9018	1	29910000			32169	7258	21266	21276	36640;36641;36642	36641					0.11831093309933749
LLTMVLLFV	9	Unmodified	_LLTMVLLFV_					0	0	0		nc|ENSG00000179242|P55283-2|CDH4;ENSG00000179242|ENST00000614565|CDH4	nc|ENSG00000179242|P55283-2|CDH4	nc|ENSG00000179242|P55283-2|CDH4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8268432617188	2	524.827389	1047.64023	-0.1321	-6.933E-05	-0.99915	-0.00052438	-1.1313	-0.00059371	524.8267772586088	99.003	3.4379	99.226	98.52	101.96	0.22263					298	81	5	0	0	0	0.7932	3	10325	10325;10349;10492		26.796	5.0938	1	31133000			32170	7258	21266	21276	36643;36644;36645	36643					0.11831093309933749
LLTMVLLFV	9	Unmodified	_LLTMVLLFV_					0	0	0		nc|ENSG00000179242|P55283-2|CDH4;ENSG00000179242|ENST00000614565|CDH4	nc|ENSG00000179242|P55283-2|CDH4	nc|ENSG00000179242|P55283-2|CDH4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8270263671875	2	524.827389	1047.64023	0.8139	0.00042716	-1.7535	-0.00092028	-0.93959	-0.00049312	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.76996	1	10376	10376		33.516	1.5607	1	27719000			32171	7258	21266	21276	36646	36646					0.11831093309933749
LLTNERRAPAR	11	Unmodified	_LLTNERRAPAR_					0	0	0		ENST00000367603.7_2_6:143158130-143266337:-|nuORF	ENST00000367603.7_2_6:143158130-143266337:-|nuORF	ENST00000367603.7_2_6:143158130-143266337:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.5975036621094	3	432.921349	1295.74222	-0.16919	-7.3247E-05	-3.607	-0.0015616	-3.7762	-0.0016348	432.91972167517196	106.53	0.42913	106.5	106.26	106.69	-0.025146					11	9	2	0	0	0	0.17302	1	11532	11532		26.75	13.242	1	69524			32172	10562	21267	21277	36647	36647					0.10617475705885226
LLTNFARPLTN	11	Unmodified	_LLTNFARPLTN_					0	0	0			REV__nc|ENSG00000100852|Q13017-2|ARHGAP5	REV__nc|ENSG00000100852|Q13017-2|ARHGAP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	630.3602905273438	2	630.358962	1258.70337	0.2707	0.00017064	-0.16742	-0.00010554	0.10328	6.5103E-05	630.3587234494281	46.939	0.62566	46.851	46.509	47.135	-0.087646					47	17	4	0	0	0	0.67568	1	3480	3480		32.751	0	1	514510	+		32173	17224	21268	21278	36648	36648					0.08436750351506817
LLTPDGTARY	10	Unmodified	_LLTPDGTARY_					0	0	0			REV__nc|ENSG00000088298|Q9BV94-2|EDEM2	REV__nc|ENSG00000088298|Q9BV94-2|EDEM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2948608398438	2	553.795663	1105.57677	-1.1091	-0.00061423	-0.14458	-8.0067E-05	-1.2537	-0.00069429	553.7962542953013	71.908	1.7842	72.293	71.504	73.288	0.38519					127	42	6	0	0	0	0.86218	1	8009	8009		32.812	3.6629	1	1264400	+		32174	16941	21269	21279	36649	36649					0.028208241263882883
LLTPGCLLVE	10	Unmodified	_LLTPGCLLVE_					0	0	0		ENST00000449886.5_1_9:129597815-129598031:+|nuORF	ENST00000449886.5_1_9:129597815-129598031:+|nuORF	ENST00000449886.5_1_9:129597815-129598031:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2799682617188	2	529.301736	1056.58892	-0.49028	-0.00025951	-2.0852	-0.0011037	-2.5755	-0.0013632	529.8045468116325	59.024	0.13713	59.017	58.958	59.095	-0.0074425					5	4	2	0	0	0	0.37624	1	5053	5053		20.947	0	1	25215			32175	11883	21270	21280	36650	36650					0.06288724545220248
LLTPIIKD	8	Unmodified	_LLTPIIKD_					0	0	0		ENSG00000110435|ENST00000227868|PDHX;nc|ENSG00000110435|O00330-2|PDHX;nc|ENSG00000110435|O00330-3|PDHX;ENST00000477173.3_1_11:35006185-35041800:+|nuORF;ENST00000532159.1_1_11:35006119-35006326:+|nuORF	ENSG00000110435|ENST00000227868|PDHX	ENSG00000110435|ENST00000227868|PDHX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7916259765625	2	456.791861	911.569169	0.27011	0.00012339	2.3821	0.0010881	2.6523	0.0012115	456.79279371016634	46.303	1.4327	46.341	45.811	47.244	0.038181					69	39	2	0	0	0	0.86288	1	3379	3379		26.796	0	1	172310			32176	2530	21271	21281	36651	36651					0.10984716596749422
LLTPLPSA	8	Unmodified	_LLTPLPSA_					0	0	0			REV__ENST00000609401.5_1_X:62647883-62647997:-|nuORF	REV__ENST00000609401.5_1_X:62647883-62647997:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.248291015625	2	406.249829	810.485105	-0.18684	-7.5904E-05	-2.4579	-0.00099852	-2.6447	-0.0010744	406.24872241647245	90.972	2.1991	91.041	90.513	92.712	0.069328					111	52	3	0	0	0	0.81548	1	9373	9373		20.482	1.1219	1	1239900	+		32177	29413	21272	21282	36652	36652					0.07228185499843676
LLTPLPSA	8	Unmodified	_LLTPLPSA_					0	0	0			REV__ENST00000609401.5_1_X:62647883-62647997:-|nuORF	REV__ENST00000609401.5_1_X:62647883-62647997:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2481384277344	2	406.249829	810.485105	1.1516	0.00046786	-4.2235	-0.0017158	-3.0718	-0.0012479	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.86288	1	9446	9446		26.796	0	1	58759000	+		32178	29413	21272	21282	36653	36653					0.07228185499843676
LLTPLPSA	8	Unmodified	_LLTPLPSA_					0	0	0			REV__ENST00000609401.5_1_X:62647883-62647997:-|nuORF	REV__ENST00000609401.5_1_X:62647883-62647997:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24847412109375	2	406.249829	810.485105	1.4359	0.00058334	-3.9293	-0.0015963	-2.4934	-0.0010129	406.24811193904833	90.886	2.3214	90.819	90.264	92.586	-0.067085					123	55	4	0	0	0	0.86791	1	9560	9560		28.254	0	1	1147600	+		32179	29413	21272	21282	36654	36654					0.07228185499843676
LLTPLPSA	8	Unmodified	_LLTPLPSA_					0	0	0			REV__ENST00000609401.5_1_X:62647883-62647997:-|nuORF	REV__ENST00000609401.5_1_X:62647883-62647997:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2483215332031	2	406.249829	810.485105	-1.8141	-0.00073698	-1.2967	-0.0005268	-3.1108	-0.0012638	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.81548	2	8922	8694;8922		25.45	0	1	42617000	+		32180	29413	21272	21282	36655;36656	36656					0.07228185499843676
LLTPLPSA	8	Unmodified	_LLTPLPSA_					0	0	0			REV__ENST00000609401.5_1_X:62647883-62647997:-|nuORF	REV__ENST00000609401.5_1_X:62647883-62647997:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2478332519531	2	406.249829	810.485105	0.62319	0.00025317	-3.6411	-0.0014792	-3.0179	-0.001226	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.81548	1	8717	8717		20.482	0	1	38001000	+		32181	29413	21272	21282	36657	36657					0.07228185499843676
LLTPPGDLR	9	Unmodified	_LLTPPGDLR_					0	0	0		nc|ENSG00000204410|O43196-4|MSH5;nc|ENSG00000204410|O43196-3|MSH5	nc|ENSG00000204410|O43196-4|MSH5	nc|ENSG00000204410|O43196-4|MSH5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2911376953125	2	491.290017	980.565481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.88	1	45.851	45.351	46.351	-0.028782								0	0	0	0.30416	1	3739	3739		29.15	1.2673	1				32182	15210	21273	21283	36658	36658					0.07442046822905013
LLTPRHLF	8	Unmodified	_LLTPRHLF_					0	0	0			REV__ENST00000532490.1_1_11:36022639-36250762:+|nuORF	REV__ENST00000532490.1_1_11:36022639-36250762:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8035888671875	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.85277	1	4665	4665		25.45	0	1	2702800	+		32183	28327	21274	21284	36659	36659					0.09366360785043071
LLTPRHLF	8	Unmodified	_LLTPRHLF_					0	0	0			REV__ENST00000532490.1_1_11:36022639-36250762:+|nuORF	REV__ENST00000532490.1_1_11:36022639-36250762:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.8033447265625	2	498.803094	995.591636	-0.49026	-0.00024454	1.7345	0.0008652	1.2443	0.00062066	498.8037935233339	49.549	1.6037	50.009	49.582	51.185	0.45983					103	38	4	0	0	0	0.91005	1	4829	4829		42.474	11.971	1	5854700	+		32184	28327	21274	21284	36660	36660					0.09366360785043071
LLTPRWQL	8	Unmodified	_LLTPRWQL_					0	0	0		ENSG00000179271|ENST00000316939|GADD45GIP1	ENSG00000179271|ENST00000316939|GADD45GIP1	ENSG00000179271|ENST00000316939|GADD45GIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8096923828125	2	513.808377	1025.6022	-0.38907	-0.00019991	1.6539	0.00084981	1.2649	0.0006499	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.87479	1	3592	3592		30.504	5.0535	1	1358900			32185	7260	21275	21285	36661	36661					0.09042343439477918
LLTPVDLGL	9	Unmodified	_LLTPVDLGL_					0	0	0			REV__nc|nan|A6NFR6-3|C5orf60	REV__nc|nan|A6NFR6-3|C5orf60	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.788818359375	2	470.789318	939.564084	-1.6844	-0.00079299	2.6596	0.0012521	0.97518	0.0004591	470.790426130468	40.157	1.4729	40.525	39.471	40.943	0.36797					78	36	3	0	0	0	0.7932	1	3407	3407		25.45	2.4077	1	1244300	+		32186	30323	21276	21286	36662	36662					0.09188412734147278
LLTPWAGRL	9	Unmodified	_LLTPWAGRL_					0	0	0			REV__ENST00000454838.6_1_11:869018-869621:-|nuORF	REV__ENST00000454838.6_1_11:869018-869621:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.807861328125	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.7932	1	4138	4138		23.042	0	1	926440	+		32187	26933	21277	21287	36663	36663					0.09042343439477918
LLTPWAGRL	9	Unmodified	_LLTPWAGRL_					0	0	0			REV__ENST00000454838.6_1_11:869018-869621:-|nuORF	REV__ENST00000454838.6_1_11:869018-869621:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8094482421875	2	513.808377	1025.6022	-0.15906	-8.1728E-05	1.3381	0.00068753	1.179	0.0006058	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.7932	1	3624	3624		24.203	4.8428	1	1484700	+		32188	26933	21277	21287	36664	36664					0.09042343439477918
LLTRKNIDVH	10	Unmodified	_LLTRKNIDVH_					0	0	0			REV__nc|ENSG00000100478|Q9Y587-3|AP4S1	REV__nc|ENSG00000100478|Q9Y587-3|AP4S1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5748596191406	3	403.575178	1207.70371	-0.098768	-3.986E-05	-1.4245	-0.00057487	-1.5232	-0.00061473	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.81117	1	9514	9514		38.754	1.2454	1	16485000	+		32189	17196	21278	21288	36665	36665					0.10816170071370834
LLTRPSWPS	9	Unmodified	_LLTRPSWPS_					0	0	0			REV__ENST00000525858.5_1_11:65429218-65429302:-|nuORF	REV__ENST00000525858.5_1_11:65429218-65429302:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.7935791015625	2	528.795466	1055.57638	-1.5408	-0.00081478	-2.3886	-0.0012631	-3.9294	-0.0020778	528.7940819687291	36.232	0.98741	36.232	35.879	36.867	0					58	23	4	0	0	0	0.64922	1	2103	2103		44.117	5.3632	1	756220	+		32190	28191	21279	21289	36666	36666					0.0508144919717779
LLTRPSWPS	9	Unmodified	_LLTRPSWPS_					0	0	0			REV__ENST00000525858.5_1_11:65429218-65429302:-|nuORF	REV__ENST00000525858.5_1_11:65429218-65429302:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.7930908203125	2	528.795466	1055.57638	0.035781	1.8921E-05	-4.0065	-0.0021186	-3.9707	-0.0020997	528.79326255139	36.295	1.3449	36.276	35.876	37.221	-0.018673					75	29	5	0	0	0	0.74721	1	2338	2338		37.159	2.9866	1	1122800	+		32191	28191	21279	21289	36667	36667					0.0508144919717779
LLTRPSWPS	9	Unmodified	_LLTRPSWPS_					0	0	0			REV__ENST00000525858.5_1_11:65429218-65429302:-|nuORF	REV__ENST00000525858.5_1_11:65429218-65429302:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.79296875	2	528.795466	1055.57638	-0.18975	-0.00010034	-3.5451	-0.0018746	-3.7348	-0.001975	528.7934615759206	36.24	0.83895	36.271	35.927	36.765	0.031132					57	23	4	0	0	0	0.25483	1	1979	1979		68.787	2.3575	1	593790	+		32192	28191	21279	21289	36668	36668					0.0508144919717779
LLTRPSWPS	9	Unmodified	_LLTRPSWPS_					0	0	0			REV__ENST00000525858.5_1_11:65429218-65429302:-|nuORF	REV__ENST00000525858.5_1_11:65429218-65429302:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.7933959960938	2	528.795466	1055.57638	0.24716	0.0001307	-4.074	-0.0021543	-3.8269	-0.0020236	528.7931728625157	35.978	0.73717	36.081	35.817	36.554	0.10306					58	23	4	0	0	0	0.41566	1	1954	1954		56.721	12.344	1	664310	+		32193	28191	21279	21289	36669	36669					0.0508144919717779
LLTRPSWPS	9	Unmodified	_LLTRPSWPS_					0	0	0			REV__ENST00000525858.5_1_11:65429218-65429302:-|nuORF	REV__ENST00000525858.5_1_11:65429218-65429302:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.7932739257812	2	528.795466	1055.57638	0.32349	0.00017106	-4.1241	-0.0021808	-3.8006	-0.0020098	528.7931534014222	36.129	0.71097	36.069	35.752	36.463	-0.060337					57	20	4	0	0	0	0.74721	1	1991	1991		37.159	1.5408	1	620290	+		32194	28191	21279	21289	36670	36670					0.0508144919717779
LLTSALKKM	9	Unmodified	_LLTSALKKM_					0	0	0			REV__nc|ENSG00000179832|Q8NDA8-5|MROH1	REV__nc|ENSG00000179832|Q8NDA8-5|MROH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	502.8136291503906	2	502.81227	1003.60999	-0.072215	-3.6311E-05	2.7912	0.0014034	2.719	0.0013671	502.8137358537146	97.184	3.7296	97.233	96.655	100.38	0.048157					256	86	5	0	0	0	0.78058	1	10343	10343		30.504	3.7075	1	22931000	+		32195	22358	21280	21290	36671	36671					0.10832734644736774
LLTSALKKM	9	Unmodified	_LLTSALKKM_					0	0	0			REV__nc|ENSG00000179832|Q8NDA8-5|MROH1	REV__nc|ENSG00000179832|Q8NDA8-5|MROH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	502.81378173828125	2	502.81227	1003.60999	0.77487	0.00038961	2.0575	0.0010346	2.8324	0.0014242	502.8133310235605	97.118	3.7782	97.281	96.705	100.48	0.16317					264	87	5	0	0	0	0.78058	1	10051	10051		30.504	1.3541	1	19692000	+		32196	22358	21280	21290	36672	36672					0.10832734644736774
LLTSALKKM	9	Unmodified	_LLTSALKKM_					0	0	0			REV__nc|ENSG00000179832|Q8NDA8-5|MROH1	REV__nc|ENSG00000179832|Q8NDA8-5|MROH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.8139343261719	2	502.81227	1003.60999	1.4802	0.00074428	1.8169	0.00091354	3.2971	0.0016578	502.81319262622696	97.079	3.8751	97.469	96.863	100.74	0.39065					217	95	5	0	0	0	0.76255	2	11712	11712;11724		35.618	6.3009	1	11311000	+		32197	22358	21280	21290	36673;36674	36673					0.10832734644736774
LLTSNWLSIS	10	Unmodified	_LLTSNWLSIS_					0	0	0			REV__ENST00000286428.5_1_X:154448526-154455520:+|nuORF	REV__ENST00000286428.5_1_X:154448526-154455520:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.329833984375	2	567.313689	1132.61282	-1.2048	-0.0006835	1.741	0.00098769	0.5362	0.00030419	567.3146010525568	90.66	0.20488	90.729	90.64	90.844	0.069328					6	4	2	0	0	0	0.37624	1	9317	9317		19.997	0	1	39149	+		32198	24639	21281	21291	36675	36675					0.051822813032458726
LLTSPAVLV	9	Unmodified	_LLTSPAVLV_					0	0	0		nc|ENSG00000065600|Q9H813-2|PACC1	nc|ENSG00000065600|Q9H813-2|PACC1	nc|ENSG00000065600|Q9H813-2|PACC1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7917175292969	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.93	1	51.966	51.466	52.466	0.036789								0	0	0	0.2969	1	4163	4163		31.955	1.4512	1				32199	14765	21282	21292	36676	36676					0.10984716596749422
LLTSPLLLS	9	Unmodified	_LLTSPLLLS_					0	0	0		ENST00000291041.5_1_16:67962699-67962768:+|nuORF	ENST00000291041.5_1_16:67962699-67962768:+|nuORF	ENST00000291041.5_1_16:67962699-67962768:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8065185546875	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.555	1	38.565	38.065	39.065	0.010708								0	0	0	0.32159	1	2292	2292		23.042	2.5607	1				32200	9676	21283	21293	36677	36677					0.11580985768239316
LLTSPLLLS	9	Unmodified	_LLTSPLLLS_					0	0	0		ENST00000291041.5_1_16:67962699-67962768:+|nuORF	ENST00000291041.5_1_16:67962699-67962768:+|nuORF	ENST00000291041.5_1_16:67962699-67962768:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.80291748046875	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.306	1	42.371	41.871	42.871	0.065037								0	0	0	0.30416	1	2835	2835		29.15	4.9468	1				32201	9676	21283	21293	36678	36678					0.11580985768239316
LLTSSDQPTSA	11	Unmodified	_LLTSSDQPTSA_					0	0	0		ENST00000490863.5_1_1:54653465-54661292:-|nuORF	ENST00000490863.5_1_1:54653465-54661292:-|nuORF	ENST00000490863.5_1_1:54653465-54661292:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3401489257812	2	560.280043	1118.54553	0.8614	0.00048263	-3.4899	-0.0019553	-2.6285	-0.0014727	560.2785007987014	102.21	0.71075	102.34	102.11	102.82	0.13523					20	17	2	0	0	0	0.17226	1	10738	10738		42.864	0.46813	1	325880			32202	12674	21284	21294	36679	36679					-0.008997936983632826
LLTSSYLS	8	Unmodified	_LLTSSYLS_					0	0	0		ENSG00000168003|ENST00000338663|SLC3A2;nc|ENSG00000168003|P08195-3|SLC3A2;nc|ENSG00000168003|P08195|SLC3A2;nc|ENSG00000168003|P08195-5|SLC3A2;nc|ENSG00000168003|P08195-4|SLC3A2;ENST00000535768.1_1_11:62651934-62652955:+|nuORF;ENST00000538682.5_1_11:62651934-62653989:+|nuORF;ENST00000457660.6_1_11:62649366-62653989:+|nuORF	ENSG00000168003|ENST00000338663|SLC3A2	ENSG00000168003|ENST00000338663|SLC3A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.24151611328125	2	442.242201	882.469849	-0.15416	-6.8174E-05	-2.6265	-0.0011616	-2.7807	-0.0012297	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.91005	1	7626	7626		42.474	1.9018	1	1068200			32203	6353	21285	21295	36680	36680					0.023912739120078186
LLTSTLTVL	9	Unmodified	_LLTSTLTVL_					0	0	0		ENST00000369209.7_3_10:118434152-118434278:-|nuORF	ENST00000369209.7_3_10:118434152-118434278:-|nuORF	ENST00000369209.7_3_10:118434152-118434278:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.2831726074219	2	480.802426	959.590298	-0.8277	-0.00039796	-1.9883	-0.00095598	-2.816	-0.0013539	480.80133531444915	102.56	0.65756	102.56	102.21	102.87	0					18	16	2	0	0	0	0.20789	1	10525	10525		30.504	21.321	1	49007			32204	10614	21286	21296	36681	36681					0.10888681905623798
LLTSTLTVL	9	Unmodified	_LLTSTLTVL_					0	0	0		ENST00000369209.7_3_10:118434152-118434278:-|nuORF	ENST00000369209.7_3_10:118434152-118434278:-|nuORF	ENST00000369209.7_3_10:118434152-118434278:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.8011474609375	2	480.802426	959.590298	-0.54823	-0.00026359	-2.8611	-0.0013756	-3.4093	-0.0016392	480.80093903656257	95.17	4.1898	95.217	94.619	98.809	0.046982					308	97	5	0	0	0	0.69914	1	10255	10255		40.573	4.9543	1	18729000			32205	10614	21286	21296	36682	36682					0.10888681905623798
LLTSTLTVL	9	Unmodified	_LLTSTLTVL_					0	0	0		ENST00000369209.7_3_10:118434152-118434278:-|nuORF	ENST00000369209.7_3_10:118434152-118434278:-|nuORF	ENST00000369209.7_3_10:118434152-118434278:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.80108642578125	2	480.802426	959.590298	-1.6775	-0.00080655	-1.6704	-0.00080313	-3.3479	-0.0016097	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.76996	1	9881	9881		33.516	3.0119	1	17379000			32206	10614	21286	21296	36683	36683					0.10888681905623798
LLTSVLSGL	9	Unmodified	_LLTSVLSGL_					0	0	0		ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.779541015625	2	451.781493	901.548434	-1.7245	-0.00077912	-1.1553	-0.00052195	-2.8799	-0.0013011	451.7808657974631	86.503	1.1616	86.667	86.314	87.476	0.16473					51	26	3	0	0	0	0.77546	1	8491	8491		31.955	6.5047	1	162500			32207	1119	21287	21297	36684	36684					0.09372126217101595
LLTSVTPPL	9	Unmodified	_LLTSVTPPL_					0	0	0		nc|ENSG00000080603|Q6ZRS2-3|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7921142578125	2	470.789318	939.564084	-1.7868	-0.00084119	3.031	0.001427	1.2443	0.00058579	470.7906139736521	40.476	1.2312	40.476	39.584	40.815	0					64	34	2	0	0	0	0.69914	1	2586	2586		40.573	1.7665	1	120330			32208	1447	21288	21298	36685	36685					0.09188412734147278
LLTTAPLAL	9	Unmodified	_LLTTAPLAL_					0	0	0		nc|ENSG00000088836|Q8NBS3-5|SLC4A11;ENSG00000088836|ENST00000642402|SLC4A11;nc|ENSG00000088836|Q8NBS3-1|SLC4A11;nc|ENSG00000088836|Q8NBS3-4|SLC4A11	nc|ENSG00000088836|Q8NBS3-5|SLC4A11	nc|ENSG00000088836|Q8NBS3-5|SLC4A11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7928771972656	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.7932	1	1933	1933		25.45	0	1	3452400			32209	1596	21289	21299	36686	36686					0.10984716596738053
LLTTHLLM	8	Oxidation (M)	_LLTTHLLM(Oxidation (M))_		LLTTHLLM(1)		LLTTHLLM(47)	0	0	1			REV__ENSG00000164180|ENST00000296595|TMEM161B	REV__ENSG00000164180|ENST00000296595|TMEM161B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2780456542969	2	479.275521	956.536489	0.22517	0.00010792	4.2433	0.0020337	4.4685	0.0021416	479.2774672255816	97.14	0.77187	97.53	97.073	97.845	0.39065					47	18	3	0	0	0	0.92176	1	11733	11733		46.766	16.925	1	996060	+		32210	21048	21290	21300	36687	36687		314			0.056481862022792484
LLTTKDRVN	9	Unmodified	_LLTTKDRVN_					0	0	0			REV__ENSG00000050030|ENST00000055682|NEXMIF	REV__ENSG00000050030|ENST00000055682|NEXMIF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2927856445312	2	530.31148	1058.60841	1.2432	0.00065927	1.1339	0.00060131	2.3771	0.0012606	530.3103458516904	92.261	1.4067	92.307	91.551	92.958	0.045456					49	32	3	0	0	0	0.20789	1	9549	9549		30.504	10.507	1	93025	+		32211	16374	21291	21301	36688	36688					0.08144816880326289
LLTTVLISP	9	Unmodified	_LLTTVLISP_					0	0	0		nc|ENSG00000169876|Q685J3-2|MUC17;ENSG00000169876|ENST00000306151|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8063049316406	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.78983	1	2477	2477		27.882	2.4321	1	336090			32212	6534	21292	21302	36689	36689					0.11580985768239316
LLTVDPNKR	9	Unmodified	_LLTVDPNKR_					0	0	0		nc|ENSG00000100784|O75582-3|RPS6KA5;ENSG00000100784|ENST00000614987|RPS6KA5	nc|ENSG00000100784|O75582-3|RPS6KA5	nc|ENSG00000100784|O75582-3|RPS6KA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.313232421875	2	528.314023	1054.61349	-0.082822	-4.3756E-05	0.29541	0.00015607	0.21259	0.00011231	528.3142773088822	98.195	1.2332	98.423	97.779	99.012	0.22787					59	27	3	0	0	0	0.76764	1	10182	10182		34.173	1.3601	1	437980			32213	1869	21293	21303	36690	36690					0.08837120742941806
LLTVELFQSFV	11	Unmodified	_LLTVELFQSFV_					0	0	0			REV__ENST00000569912.1_1_22:40439522-40440098:-|nuORF	REV__ENST00000569912.1_1_22:40439522-40440098:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3922729492188	2	648.365921	1294.71729	0.94461	0.00061245	-1.6528	-0.0010716	-0.70817	-0.00045915	648.8657304763685	106.47	0.44109	106.56	106.48	106.92	0.099007					14	9	2	0	0	0	0.17551	1	11404	11404		37.812	0	1	82866	+		32214	28917	21294	21304	36691	36691					0.0817198305992406
LLTVFTTG	8	Unmodified	_LLTVFTTG_					0	0	0			REV__chr12:119803389-119822820|59|38.2|0.78|5.61|-|0|CIT,CIT|1	REV__chr12:119803389-119822820|59|38.2|0.78|5.61|-|0|CIT,CIT|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.24700927734375	2	426.247286	850.48002	-1.7424	-0.0007427	-1.2289	-0.00052381	-2.9713	-0.0012665	426.2466996526724	84.783	2.3033	84.933	83.363	85.666	0.14952					100	52	3	0	0	0	0.85277	1	8200	8200		25.45	4.9683	1	246720	+		32215	15515	21295	21305	36692	36692					0.04879881637248218
LLTVRKEKPR	10	Unmodified	_LLTVRKEKPR_					0	0	0			REV__ENSG00000125351|ENST00000276201|UPF3B	REV__ENSG00000125351|ENST00000276201|UPF3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.93212890625	3	413.934706	1238.78229	-1.1382	-0.00047114	-3.9325	-0.0016278	-5.0707	-0.002099	413.9330056480743	43.336	2.2043	43.3	41.98	44.184	-0.03582					131	52	3	0	0	0	0.8583	1	3414	3414		22.562	4.0305	1	471060	+		32216	18637	21296	21306	36693	36693					0.1724502237645993
LLTVSRTN	8	Unmodified	_LLTVSRTN_					0	0	0			REV__ENST00000507234.1_1_5:14639922-14640066:-|nuORF	REV__ENST00000507234.1_1_5:14639922-14640066:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2666015625	2	452.266542	902.51853	-0.25934	-0.00011729	-0.94974	-0.00042953	-1.2091	-0.00054683	452.2658103859262	36.504	1.3068	36.785	36.115	37.422	0.28173					85	31	5	0	0	0	0.84341	1	2859	2859		24.203	1.1603	1	1468700	+		32217	27902	21297	21307	36694	36694					0.06337187271765288
LLTVVKVHGSA	11	Unmodified	_LLTVVKVHGSA_					0	0	0			REV__nc|ENSG00000290972|A0PJZ0|ANKRD20A5P	REV__nc|ENSG00000290972|A0PJZ0|ANKRD20A5P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.3429565429688	2	562.345323	1122.67609	1.4163	0.00079647	-4.4036	-0.0024763	-2.9872	-0.0016799	562.3426954629917	90.573	4.6587	90.62	89.222	93.881	0.046448					198	110	3	0	0	0	0.74763	1	9345	9345		22.58	2.0978	1	624150	+		32218	29053	21298	21308	36695	36695					0.11966266811145942
LLTVVTLPT	9	Unmodified	_LLTVVTLPT_					0	0	0			REV__ENSG00000129255|ENST00000250124|MPDU1	REV__ENSG00000129255|ENST00000250124|MPDU1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.80517578125	2	478.804968	955.595384	-2.1118	-0.0010111	4.0445	0.0019365	1.9327	0.00092538	478.8067215450766	42.623	1.2578	42.623	42.157	43.414	0.00016785					54	29	3	0	0	0	0.77546	1	3219	3219		31.955	7.7521	1	179530	+		32219	18815	21299	21309	36696	36696					0.11580985768239316
LLTVVTLPT	9	Unmodified	_LLTVVTLPT_					0	0	0			REV__ENSG00000129255|ENST00000250124|MPDU1	REV__ENSG00000129255|ENST00000250124|MPDU1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8055725097656	2	478.804968	955.595384	-0.92233	-0.00044162	2.0534	0.00098317	1.1311	0.00054155	478.8057713642185	40.528	0.94245	40.532	40.111	41.054	0.0043983					47	34	2	0	0	0	0.7932	1	2521	2521		23.042	1.0826	1	213120	+		32220	18815	21299	21309	36697	36697					0.11580985768239316
LLTVYEMS	8	Unmodified	_LLTVYEMS_					0	0	0			REV__ENST00000316715.8_1_X:13790657-13790762:-|nuORF	REV__ENST00000316715.8_1_X:13790657-13790762:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.79986572265625	2	478.243886	954.47322	-2.3044	-0.001102	4.0355	0.0019299	1.7311	0.00082789	478.2455835933998	40.314	0.40134	40.903	40.681	41.083	0.58915					14	10	2	0	0	0	0.4196	1	3433	3433		33.516	1.5607	1	208230	+		32221	24955	21300	21310	36698	36698					-0.005837993056388768
LLTWLVPIT	9	Unmodified	_LLTWLVPIT_					0	0	0			REV__ENSG00000099617|ENST00000215368|EFNA2	REV__ENSG00000099617|ENST00000215368|EFNA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7716064453125	2	528.328611	1054.64267	-0.046823	-2.4738E-05	-2.7025	-0.0014278	-2.7493	-0.0014525	528.3272886205544	54.594	2.2982	55.167	54.069	56.367	0.57279					100	54	3	0	0	0	0.20789	1	5695	5695		11.511	0	1	789640	+		32222	17096	21301	21311	36699	36699					0.11753265039214966
LLTYVRKLAM	10	Unmodified	_LLTYVRKLAM_					0	0	0			REV__ENSG00000108839|ENST00000251535|ALOX12	REV__ENSG00000108839|ENST00000251535|ALOX12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3666381835938	2	604.365201	1206.71585	-0.48563	-0.0002935	2.5696	0.001553	2.0839	0.0012595	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.85958	1	11622	11622		15.642	0	1	63350000	+		32223	17735	21302	21312	36700	36700					0.12076070490184065
LLTYVRKLAM	10	Unmodified	_LLTYVRKLAM_					0	0	0			REV__ENSG00000108839|ENST00000251535|ALOX12	REV__ENSG00000108839|ENST00000251535|ALOX12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3662109375	2	604.365201	1206.71585	2.3603	0.0014265	0.029722	1.7963E-05	2.39	0.0014444	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.86763	1	12849	12849		26.693	1.1189	1	5984800	+		32224	17735	21302	21312	36701	36701					0.12076070490184065
LLVAAGRPAL	10	Unmodified	_LLVAAGRPAL_					0	0	0			REV__ENSG00000113296|ENST00000350881|THBS4	REV__ENSG00000113296|ENST00000350881|THBS4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.850830078125	2	490.816202	979.617851	-1.1952	-0.00058665	-0.38641	-0.00018966	-1.5817	-0.0007763	490.8157065597324	75.267	0.50024	75.355	75.112	75.613	0.087631					17	12	2	0	0	0	0.37624	1	6941	6941		18.324	0	1	46139	+		32225	17987	21303	21313	36702	36702					0.127226299565109
LLVAAIGELGF	11	Unmodified	_LLVAAIGELGF_					0	0	0			REV__ENSG00000111012|ENST00000228606|CYP27B1	REV__ENSG00000111012|ENST00000228606|CYP27B1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	551.7650756835938	2	551.828975	1101.6434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.006	1	58.999	58.499	59.499	-0.0074387								0	0	0	0.56276	1	5045	5045		26.693	0	1		+		32226	17844	21304	21314	36703	36703					0.09664059688270754
LLVAAPRTR	9	Unmodified	_LLVAAPRTR_					0	0	0		ENST00000524800.5_1_1:163291794-163291857:+|nuORF;ENST00000367900.7_1_1:163291794-163295867:+|nuORF;ENST00000450453.6_2_1:163291794-163292711:+|nuORF;ENST00000490881.5_1_1:163291794-163297702:+|nuORF	ENST00000524800.5_1_1:163291794-163291857:+|nuORF	ENST00000524800.5_1_1:163291794-163291857:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8191833496094	2	498.819276	995.623999	-2.7449	-0.0013692	2.5398	0.0012669	-0.20506	-0.00010229	498.82039912199195	38.8	1.2873	38.811	38.402	39.689	0.011173					65	29	4	0	0	0	0.28875	1	2728	2728		65.803	14.468	1	982290			32227	10573	21305	21315	36704	36704					0.1260114818802549
LLVAAPRTRRL	11	Unmodified	_LLVAAPRTRRL_					0	0	0		ENST00000524800.5_1_1:163291794-163291857:+|nuORF;ENST00000367900.7_1_1:163291794-163295867:+|nuORF;ENST00000450453.6_2_1:163291794-163292711:+|nuORF;ENST00000490881.5_1_1:163291794-163297702:+|nuORF	ENST00000524800.5_1_1:163291794-163291857:+|nuORF	ENST00000524800.5_1_1:163291794-163291857:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3690795898438	2	633.411863	1264.80917	0.90489	0.00057317	-0.9367	-0.00059332	-0.031816	-2.0153E-05	633.4104656826445	97.713	0.21877	97.874	97.753	97.972	0.16073					6	4	2	0	0	0	0.1728	1	10118	10118		31.53	11.533	1	30628			32228	10573	21306	21316	36705	36705					0.18736130987645083
LLVAAQRQDRL	11	Unmodified	_LLVAAQRQDRL_					0	0	0		ENSG00000099860|ENST00000215631|GADD45B;ENST00000592937.1_1_19:2476275-2476629:+|nuORF	ENSG00000099860|ENST00000215631|GADD45B	ENSG00000099860|ENST00000215631|GADD45B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8826904296875	2	641.883136	1281.75172	-1.1528	-0.00073997	0.04656	2.9886E-05	-1.1063	-0.00071008	641.8829970841505	95.709	2.5048	95.911	94.329	96.834	0.20242					216	59	5	0	0	0	0.67778	1	9886	9886		35.152	4.8343	1	1922900			32229	1771	21307	21317	36706	36706					0.12211243991396259
LLVACIHS	8	Unmodified	_LLVACIHS_					0	0	0			REV__ENSG00000176893|ENST00000641926|OR51G2	REV__ENSG00000176893|ENST00000641926|OR51G2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.26165771484375	2	428.241481	854.468409	-1.0668	-0.00045686	-1.3661	-0.00058502	-2.4329	-0.0010419	428.2396176283746	90.532	0.30803	91.003	90.894	91.202	0.47068					10	7	2	0	0	0	0.4196	1	10773	10773		37.028	0	1	148890	+		32230	22151	21308	21318	36707	36707					0.03535361342244414
LLVADRTR	8	Unmodified	_LLVADRTR_					0	0	0			REV__ENST00000325103.10_1_10:100205097-100206676:-|nuORF	REV__ENST00000325103.10_1_10:100205097-100206676:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2877502441406	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.81548	1	10246	10246		20.482	0	1	48574000	+		32231	25054	21309	21319	36708	36708					0.0874858239999412
LLVADRTR	8	Unmodified	_LLVADRTR_					0	0	0			REV__ENST00000325103.10_1_10:100205097-100206676:-|nuORF	REV__ENST00000325103.10_1_10:100205097-100206676:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28759765625	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.86791	1	9700	9700		28.254	0	1	50946000	+		32232	25054	21309	21319	36709	36709					0.0874858239999412
LLVADRTR	8	Unmodified	_LLVADRTR_					0	0	0			REV__ENST00000325103.10_1_10:100205097-100206676:-|nuORF	REV__ENST00000325103.10_1_10:100205097-100206676:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2877502441406	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.91472	1	11473	11473		44.117	1.6423	1	24731000	+		32233	25054	21309	21319	36710	36710					0.0874858239999412
LLVAFLICL	9	Unmodified	_LLVAFLICL_					0	0	0			REV__ENSG00000139974|ENST00000267488|SLC38A6	REV__ENSG00000139974|ENST00000267488|SLC38A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.81396484375	2	502.814282	1003.61401	-0.061598	-3.0972E-05	-1.1764	-0.0005915	-1.238	-0.00062247	502.81375645147	97.475	3.9537	97.532	96.775	100.73	0.056839					266	91	5	0	0	0	0.7932	1	10227	10227		21.702	0	1	22149000	+		32234	19586	21310	21320	36711	36711					0.11234824138421118
LLVAFLICL	9	Unmodified	_LLVAFLICL_					0	0	0			REV__ENSG00000139974|ENST00000267488|SLC38A6	REV__ENSG00000139974|ENST00000267488|SLC38A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	502.8140869140625	2	502.814282	1003.61401	-0.072215	-3.6311E-05	-1.2091	-0.00060793	-1.2813	-0.00064424	502.8137358537146	97.184	3.7296	97.233	96.655	100.38	0.048157					256	86	5	0	0	0	0.7932	1	10450	10450		21.702	0	1	22931000	+		32235	19586	21310	21320	36712	36712					0.11234824138421118
LLVAGGVPL	9	Unmodified	_LLVAGGVPL_					0	0	0		ENST00000461159.6_1_7:18330122-18868840:+|nuORF;nc|ENSG00000048052|Q9UKV0-4|HDAC9;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;ENSG00000048052|ENST00000686413|HDAC9;nc|ENSG00000048052|Q9UKV0-11|HDAC9;nc|ENSG00000048052|Q9UKV0-9|HDAC9;nc|ENSG00000048052|Q9UKV0-10|HDAC9;nc|ENSG00000048052|Q9UKV0-8|HDAC9;nc|ENSG00000048052|Q9UKV0-3|HDAC9	ENST00000461159.6_1_7:18330122-18868840:+|nuORF	ENST00000461159.6_1_7:18330122-18868840:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7738952636719	2	419.773471	837.53239	-1.7976	-0.00075458	3.9115	0.0016419	2.1139	0.00088736	419.77504327395843	41.402	2.6775	41.816	41.329	44.007	0.4139					184	68	5	0	0	0	0.72098	1	3571	3571		39.021	0	1	169320000			32236	971	21311	21321	36713	36713					0.10712464770847419
LLVAGGVPL	9	Unmodified	_LLVAGGVPL_					0	0	0		ENST00000461159.6_1_7:18330122-18868840:+|nuORF;nc|ENSG00000048052|Q9UKV0-4|HDAC9;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;ENSG00000048052|ENST00000686413|HDAC9;nc|ENSG00000048052|Q9UKV0-11|HDAC9;nc|ENSG00000048052|Q9UKV0-9|HDAC9;nc|ENSG00000048052|Q9UKV0-10|HDAC9;nc|ENSG00000048052|Q9UKV0-8|HDAC9;nc|ENSG00000048052|Q9UKV0-3|HDAC9	ENST00000461159.6_1_7:18330122-18868840:+|nuORF	ENST00000461159.6_1_7:18330122-18868840:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.77166748046875	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.72098	2	3571	3571;3595		39.021	0	1	184570000			32237	971	21311	21321	36714;36715	36714					0.10712464770847419
LLVAGLKKEVQ	11	Unmodified	_LLVAGLKKEVQ_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.3798217773438	2	599.381906	1196.74926	-0.35766	-0.00021438	-2.6712	-0.0016011	-3.0289	-0.0018155	599.3801693786043	103.37	3.7428	103.41	103.03	106.77	0.041481					250	89	5	0	0	0	0.72918	1	11209	11209		26.693	1.1189	1	13277000			32238	8133	21312	21322	36716	36716					0.15875395533748815
LLVAIRKQQPF	11	Unmodified	_LLVAIRKQQPF_					0	0	0		ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2729187011719	3	438.27484	1311.80269	-1.8129	-0.00079457	-2.3982	-0.0010511	-4.2111	-0.0018456	438.27366907360886	106.16	0.83208	106.21	105.86	106.69	0.053757					80	19	5	0	0	0	0.73621	1	11255	11255		25.126	3.3456	1	5030100			32239	12882	21313	21323	36717	36717					0.15926193036261793
LLVAKARTVIP	11	Unmodified	_LLVAKARTVIP_					0	0	0		ENST00000548804.5_1_12:57998523-57998613:+|nuORF	ENST00000548804.5_1_12:57998523-57998613:+|nuORF	ENST00000548804.5_1_12:57998523-57998613:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8671264648438	2	590.892441	1179.77033	-0.24	-0.00014181	-0.72302	-0.00042722	-0.96302	-0.00056904	590.892033525718	103.58	0.25436	103.58	103.43	103.68	0					7	5	2	0	0	0	0.17318	1	10624	10624		32.812	3.6629	1	92819			32240	13624	21314	21324	36718	36718					0.18763405633262664
LLVAKARTVIP	11	Unmodified	_LLVAKARTVIP_					0	0	0		ENST00000548804.5_1_12:57998523-57998613:+|nuORF	ENST00000548804.5_1_12:57998523-57998613:+|nuORF	ENST00000548804.5_1_12:57998523-57998613:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8665161132812	2	590.892441	1179.77033	-0.64262	-0.00037972	-3.0012	-0.0017734	-3.6438	-0.0021531	590.89063609551	103.46	0.12134	103.47	103.4	103.52	0.0082016					6	2	3	0	0	0	0.17385	1	11122	11122		25.574	0	1	141970			32241	13624	21314	21324	36719	36719					0.18763405633262664
LLVAKRRGL	9	Unmodified	_LLVAKRRGL_					0	0	0		ENSG00000090924|ENST00000425673|PLEKHG2;nc|ENSG00000090924|Q9H7P9-3|PLEKHG2;nc|ENSG00000090924|Q9H7P9-2|PLEKHG2	ENSG00000090924|ENST00000425673|PLEKHG2	ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3171997070312	2	513.350743	1024.68693	-0.38365	-0.00019695	0.41143	0.00021121	0.027772	1.4257E-05	513.3507810727294	55.762	0.82818	55.826	55.095	55.923	0.063725					47	28	2	0	0	0	0.20789	1	4608	4608		38.806	0	1	97886			32242	1660	21315	21325	36720	36720					0.17557713976088962
LLVALDRM	8	Unmodified	_LLVALDRM_					0	0	0		ENSG00000184986|ENST00000392519|TMEM121	ENSG00000184986|ENST00000392519|TMEM121	ENSG00000184986|ENST00000392519|TMEM121	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7778015136719	2	465.775688	929.536823	-0.1189	-5.538E-05	4.3164	0.0020105	4.1975	0.0019551	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.91005	1	7846	7846		42.474	0	1	345200			32243	7663	21316	21326	36721	36721					0.06923605922111165
LLVALDRM	8	Unmodified	_LLVALDRM_					0	0	0		ENSG00000184986|ENST00000392519|TMEM121	ENSG00000184986|ENST00000392519|TMEM121	ENSG00000184986|ENST00000392519|TMEM121	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7776184082031	2	465.775688	929.536823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.902	1	80.843	80.343	81.343	-0.059692								0	0	0	0.30457	1	8146	8146		50.025	14.824	1				32244	7663	21316	21326	36722	36722					0.06923605922111165
LLVALDRM	8	Unmodified	_LLVALDRM_					0	0	0		ENSG00000184986|ENST00000392519|TMEM121	ENSG00000184986|ENST00000392519|TMEM121	ENSG00000184986|ENST00000392519|TMEM121	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.777587890625	2	465.775688	929.536823	0.60386	0.00028126	3.3703	0.0015698	3.9742	0.0018511	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.89962	1	7921	7921		38.806	8.3025	1	1082300			32245	7663	21316	21326	36723	36723					0.06923605922111165
LLVALIQAA	9	Unmodified	_LLVALIQAA_					0	0	0			REV__ENSG00000091947|ENST00000206380|TMEM101	REV__ENSG00000091947|ENST00000206380|TMEM101	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30108642578125	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.7932	1	1963	1963		26.796	0	1	1220600	+		32246	17025	21317	21327	36724	36724					0.1262842283365444
LLVALIQAA	9	Unmodified	_LLVALIQAA_					0	0	0			REV__ENSG00000091947|ENST00000206380|TMEM101	REV__ENSG00000091947|ENST00000206380|TMEM101	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.3011474609375	2	456.299853	910.585153	0.82269	0.00037539	2.1236	0.000969	2.9463	0.0013444	456.30067401982916	32.79	1.601	33.001	32.465	34.066	0.21168					118	37	4	0	0	0	0.76996	1	2360	2360		33.516	4.366	1	2892400	+		32247	17025	21317	21327	36725	36725					0.1262842283365444
LLVALMPVIP	10	Unmodified	_LLVALMPVIP_					0	0	0		ENST00000470843.5_1_1:93299393-93299459:+|nuORF	ENST00000470843.5_1_1:93299393-93299459:+|nuORF	ENST00000470843.5_1_1:93299393-93299459:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.3399658203125	2	533.340664	1064.66677	-0.0064483	-3.4392E-06	-0.98002	-0.00052269	-0.98647	-0.00052613	533.3400284044101	98.996	2.9551	99.219	98.699	101.65	0.22262					166	70	4	0	0	0	0.85108	2	10398	10350;10398		19.36	1.0356	1	2531600			32248	12228	21318	21328	36726;36727	36727					0.13702782201266928
LLVALMPVIP	10	Unmodified	_LLVALMPVIP_					0	0	0		ENST00000470843.5_1_1:93299393-93299459:+|nuORF	ENST00000470843.5_1_1:93299393-93299459:+|nuORF	ENST00000470843.5_1_1:93299393-93299459:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	533.3388671875	2	533.340664	1064.66677	0.82147	0.00043812	-1.621	-0.00086457	-0.79958	-0.00042645	533.3397014288719	99.113	2.1038	99.27	98.724	100.83	0.15659					144	48	4	0	0	0	0.85108	1	10439	10439		19.36	1.0356	1	2216600			32249	12228	21318	21328	36728	36728					0.13702782201266928
LLVALSYS	8	Unmodified	_LLVALSYS_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	433.2552490234375	2	433.255111	864.49567	-0.96205	-0.00041681	0.18396	7.9702E-05	-0.77809	-0.00033711	433.2558834375808	107.3	0.97002	107.3	106.8	107.77	0					98	22	6	0	0	0	0.89457	3	11125	11125;11149;11161		37.028	8.7742	1	53955000	+		32250	22122	21319	21329	36729;36730;36731	36729					0.05800168154280527
LLVALSYS	8	Unmodified	_LLVALSYS_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.25543212890625	2	433.255111	864.49567	-0.16825	-7.2895E-05	-0.65993	-0.00028592	-0.82818	-0.00035881	433.25555494708175	107.35	1.0528	107.31	106.77	107.82	-0.034409					102	24	6	0	0	0	0.89457	1	11703	11703		37.028	0	1	61129000	+		32251	22122	21319	21329	36732	36732					0.05800168154280527
LLVALSYS	8	Unmodified	_LLVALSYS_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.2557067871094	2	433.255111	864.49567	2.7182	0.0011777	-3.4266	-0.0014846	-0.70837	-0.00030691	433.2543702716111	107.32	1.0507	107.28	106.79	107.84	-0.034134					105	24	6	0	0	0	0.89457	1	11900	11900		37.028	0	1	62658000	+		32252	22122	21319	21329	36733	36733					0.05800168154280527
LLVALSYS	8	Unmodified	_LLVALSYS_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.2555847167969	2	433.255111	864.49567	2.3643	0.0010243	-3.0422	-0.001318	-0.67785	-0.00029368	433.254517852787	107.13	1.2704	107.16	106.63	107.9	0.035614					125	29	6	0	0	0	0.89457	1	11747	11747		37.028	0	1	67355000	+		32253	22122	21319	21329	36734	36734					0.05800168154280527
LLVALSYS	8	Unmodified	_LLVALSYS_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.2554016113281	2	433.255111	864.49567	-1.5591	-0.00067547	0.36423	0.0001578	-1.1948	-0.00051767	433.25608106819277	107.03	1.2892	107.16	106.64	107.93	0.13866					139	31	6	0	0	0	0.89457	2	11454	11454;11490		37.028	1.8278	1	127480000	+		32254	22122	21319	21329	36735;36736	36735					0.05800168154280527
LLVALSYS	8	Unmodified	_LLVALSYS_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.25537109375	2	433.255111	864.49567	0.73522	0.00031854	-1.8791	-0.00081413	-1.1439	-0.00049559	433.2550173267258	107.12	1.2179	107.21	106.73	107.95	0.091255					137	29	6	0	0	0	0.89457	2	11464	11464;11512		37.028	1.8278	1	118330000	+		32255	22122	21319	21329	36737;36738	36737					0.05800168154280527
LLVALSYS	8	Unmodified	_LLVALSYS_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.2549743652344	2	433.255111	864.49567	0.73485	0.00031838	-0.96066	-0.00041621	-0.22581	-9.7834E-05	433.2546145241724	114.53	0.15018	114.59	114.55	114.7	0.061073					6	4	2	0	0	0	0.92176	1	12242	12242		46.766	7.7449	1	480670	+		32256	22122	21319	21329	36739	36739					0.05800168154280527
LLVALSYS	8	Unmodified	_LLVALSYS_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.25506591796875	2	433.255111	864.49567	-1.8302	-0.00079294	0.64395	0.000279	-1.1862	-0.00051394	433.25608407355435	107.16	1.1935	107.2	106.67	107.87	0.036118					137	28	6	0	0	0	0.89457	3	11403	11403;11426;11462		44.531	8.7742	1	100650000	+		32257	22122	21319	21329	36740;36741;36742	36740					0.05800168154280527
LLVALSYS	8	Unmodified	_LLVALSYS_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.255859375	2	433.255111	864.49567	1.9992	0.00086615	-3.1655	-0.0013715	-1.1663	-0.00050531	433.25365732536335	111.6	0.52182	111.64	111.39	111.92	0.041832					37	17	3	0	0	0	0.89457	1	13510	13510		37.028	7.1869	1	623410	+		32258	22122	21319	21329	36743	36743					0.05800168154280527
LLVALSYS	8	Unmodified	_LLVALSYS_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.25482177734375	2	433.255111	864.49567	1.9986	0.0008659	-2.4692	-0.0010698	-0.47061	-0.0002039	433.25386183757	112.22	0.92635	112.25	111.94	112.87	0.030602					62	35	2	0	0	0	0.89457	1	13565	13565		37.028	0	1	560910	+		32259	22122	21319	21329	36744	36744					0.05800168154280527
LLVALSYS	8	Unmodified	_LLVALSYS_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	433.255111	864.49567	0.73485	0.00031838	-0.96066	-0.00041621	-0.22581	-9.7834E-05	433.2546145241724	114.53	0.15018	114.59	114.55	114.7	0.061073	0	0	NaN	46.766	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	480670	+		32260	22122	21319	21329							0.05800168154280527
LLVALVLGN	9	Unmodified	_LLVALVLGN_					0	0	0			REV__ENSG00000128310|ENST00000249041|GALR3	REV__ENSG00000128310|ENST00000249041|GALR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3011779785156	2	456.299853	910.585153	-0.0072028	-3.2867E-06	3.0673	0.0013996	3.0601	0.0013963	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.76996	1	1940	1940		33.516	0.022601	1	1057300	+		32261	18768	21320	21330	36745	36745					0.1262842283365444
LLVAPALLAPA	11	Unmodified	_LLVAPALLAPA_					0	0	0			REV__ENSG00000072840|ENST00000264956|EVC	REV__ENSG00000072840|ENST00000264956|EVC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8270263671875	2	524.841885	1047.66922	-0.039084	-2.0513E-05	1.994	0.0010465	1.9549	0.001026	524.8428345800319	99.327	0.24466	99.377	99.191	99.436	0.04982					11	5	3	0	0	0	0.17566	1	10522	10522		40.573	11.423	1	365510	+		32262	16659	21321	21331	36746	36746					0.14728953930534772
LLVAPQTMA	9	Unmodified	_LLVAPQTMA_					0	0	0			REV__nc|ENSG00000020256|Q9NTW7-6|ZFP64	REV__nc|ENSG00000020256|Q9NTW7-6|ZFP64	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28759765625	2	472.267696	942.520839	0.72795	0.00034379	-2.5713	-0.0012143	-1.8433	-0.00087055	472.26642310085197	95.411	0.37775	95.574	95.514	95.891	0.16316					11	8	2	0	0	0	0.20789	1	9829	9829		55.504	21.989	1	155880	+		32263	16235	21322	21332	36747	36747					0.04727899685201464
LLVAPRYLRP	10	Unmodified	_LLVAPRYLRP_					0	0	0			REV__nc|ENSG00000100276|Q92737-2|RASL10A	REV__nc|ENSG00000100276|Q92737-2|RASL10A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.3800048828125	2	599.376958	1196.73936	3.2712	0.0019607	1.8092	0.0010844	5.0805	0.0030451	599.3778849492661	103.51	3.7036	103.46	103.04	106.74	-0.043755					239	88	5	0	0	0	0.86452	1	11373	11373		30.504	0	1	11967000	+		32264	17162	21323	21333	36748	36748					0.14886252319024607
LLVAPTPPALQ	11	Unmodified	_LLVAPTPPALQ_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3404541015625	2	560.342249	1118.66995	-1.1265	-0.00063122	-1.8331	-0.0010272	-2.9596	-0.0016584	560.3411024675651	107.34	0.71041	107.3	106.95	107.66	-0.034409					44	16	3	0	0	0	0.66929	1	11629	11629		36.447	4.9169	1	686070			32265	2161	21324	21334	36749	36749					0.11535748579581195
LLVAPTPPALQ	11	Unmodified	_LLVAPTPPALQ_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3405151367188	2	560.342249	1118.66995	0.39666	0.00022227	-4.1426	-0.0023213	-3.7459	-0.002099	560.3399034928755	102.04	3.4939	102.24	101.58	105.08	0.19484					369	86	7	0	0	0	0.72918	1	11017	11017		26.693	0	1	135510000			32266	2161	21324	21334	36750	36750					0.11535748579581195
LLVAPTPPALQ	11	Unmodified	_LLVAPTPPALQ_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402709960938	2	560.342249	1118.66995	-1.4184	-0.00079481	-2.3281	-0.0013045	-3.7465	-0.0020993	560.3408991920513	102.18	3.487	102.32	101.71	105.2	0.13569					387	86	7	0	0	0	0.65746	1	10995	10995		37.812	3.639	1	120110000			32267	2161	21324	21334	36751	36751					0.11535748579581195
LLVAPTPPALQ	11	Unmodified	_LLVAPTPPALQ_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	560.342249	1118.66995	0.39589	0.00022184	-3.6597	-0.0020507	-3.2638	-0.0018288	560.3400879861559	106.89	0.89037	107.04	106.56	107.45	0.14843	-0.11586	-6.004E-05	NaN	36.447	60	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1239500			32268	2161	21324	21334							0.11535748579581195
LLVAPTPPALQ	11	Unmodified	_LLVAPTPPALQ_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	560.342249	1118.66995	0.86162	0.0004828	-3.9026	-0.0021868	-3.041	-0.001704	560.3399558964102	107.09	1.0788	107.18	106.51	107.59	0.091255	0.027883	-0.00033231	NaN	36.447	66	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	984270			32269	2161	21324	21334							0.11535748579581195
LLVAPTPPALQ	11	Unmodified	_LLVAPTPPALQ_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	560.342249	1118.66995	-1.4185	-0.00079483	-1.5791	-0.00088481	-2.9975	-0.0016796	560.341268164918	107.04	0.90933	107.09	106.6	107.51	0.053757	-0.058777	0.0022717	NaN	36.447	66	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1192400			32270	2161	21324	21334							0.11535748579581195
LLVAPTPPALQ	11	Unmodified	_LLVAPTPPALQ_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	560.342249	1118.66995	2.4925	0.0013966	-5.709	-0.003199	-3.2165	-0.0018024	560.3393519516678	106.86	0.64298	106.96	106.52	107.16	0.10396	-0.19061	-0.0023567	NaN	36.447	47	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153690			32271	2161	21324	21334							0.11535748579581195
LLVAPVASLAR	11	Unmodified	_LLVAPVASLAR_					0	0	0			REV__ENSG00000054803|ENST00000064571|CBLN4	REV__ENSG00000054803|ENST00000064571|CBLN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.3533935546875	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.64498	2	10571	10550;10571		39.253	7.298	1	5963400	+		32272	16406	21325	21335	36752;36753	36753					0.14682857190791765
LLVAQINPLVG	11	Unmodified	_LLVAQINPLVG_					0	0	0			REV__ENST00000479986.1_1_6:27858584-27860837:-|nuORF	REV__ENST00000479986.1_1_6:27858584-27860837:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8540649414062	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.72918	1	10717	10717		26.693	0	1	34546000	+		32273	15517	21326	21336	36754	36754					0.13407437470914374
LLVAQINPLVG	11	Unmodified	_LLVAQINPLVG_					0	0	0			REV__ENST00000479986.1_1_6:27858584-27860837:-|nuORF	REV__ENST00000479986.1_1_6:27858584-27860837:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8538208007812	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.72228	1	11116	11116		27.882	0	1	50786000	+		32274	15517	21326	21336	36755	36755					0.13407437470914374
LLVARTAR	8	Unmodified	_LLVARTAR_					0	0	0			REV__nc|ENSG00000050628|P43115-3|PTGER3	REV__nc|ENSG00000050628|P43115-3|PTGER3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2745361328125	2	450.292894	898.571235	-1.0995	-0.0004951	-2.7082	-0.0012195	-3.8077	-0.0017146	450.2910443411701	93.515	0.65147	93.515	93.452	94.104	0					21	14	2	0	0	0	0.4196	1	9294	9294		19.36	0	1	146990	+		32275	16378	21327	21337	36756	36756					0.11789190125227833
LLVARTAR	8	Unmodified	_LLVARTAR_					0	0	0			REV__nc|ENSG00000050628|P43115-3|PTGER3	REV__nc|ENSG00000050628|P43115-3|PTGER3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2742004394531	2	450.292894	898.571235	1.7369	0.00078213	1.8625	0.00083867	3.5994	0.0016208	450.29304953505493	93.289	0.41545	93.227	93.167	93.582	-0.061432					18	9	2	0	0	0	0.4196	1	9904	9904		12.959	0	1	139740	+		32276	16378	21327	21337	36757	36757					0.11789190125227833
LLVARTSSKG	10	Unmodified	_LLVARTSSKG_					0	0	0			REV__ENST00000525647.1_1_11:118133556-118134958:-|nuORF	REV__ENST00000525647.1_1_11:118133556-118134958:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3148803710938	2	516.314023	1030.61349	3.1012	0.0016012	-3.1554	-0.0016292	-0.054235	-2.8002E-05	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.86272	1	12663	12663		24.519	0.99649	1	1162600	+		32277	20180	21328	21338	36758	36758					0.0994112074295117
LLVARTSSKG	10	Unmodified	_LLVARTSSKG_					0	0	0			REV__ENST00000525647.1_1_11:118133556-118134958:-|nuORF	REV__ENST00000525647.1_1_11:118133556-118134958:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.314208984375	2	516.314023	1030.61349	0.876	0.00045229	-1.3141	-0.00067851	-0.43813	-0.00022621	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.8608	1	10985	10985		34.173	0.65696	1	67025000	+		32278	20180	21328	21338	36759	36759					0.0994112074295117
LLVARTSSKG	10	Unmodified	_LLVARTSSKG_					0	0	0			REV__ENST00000525647.1_1_11:118133556-118134958:-|nuORF	REV__ENST00000525647.1_1_11:118133556-118134958:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3138427734375	2	516.314023	1030.61349	0.80555	0.00041592	-1.2336	-0.00063695	-0.42809	-0.00022103	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.84112	1	10686	10686		37.159	3.6435	1	72906000	+		32279	20180	21328	21338	36760	36760					0.0994112074295117
LLVATLMR	8	Unmodified	_LLVATLMR_					0	0	0			REV__ENST00000485551.5_1_1:35917324-35917369:-|nuORF	REV__ENST00000485551.5_1_1:35917324-35917369:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	458.787353515625	2	458.786056	915.557558	-1.0758	-0.00049355	4.3143	0.0019793	3.2385	0.0014858	458.7880145411106	93.372	3.7853	93.372	92.851	96.637	0					181	88	4	0	0	0	0.884	1	9223	9223		33.516	1.5607	1	6725700	+		32280	27526	21329	21339	36761	36761					0.09640196301768356
LLVATLMR	8	Unmodified	_LLVATLMR_					0	0	0			REV__ENST00000485551.5_1_1:35917324-35917369:-|nuORF	REV__ENST00000485551.5_1_1:35917324-35917369:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	458.7872009277344	2	458.786056	915.557558	-0.12843	-5.8921E-05	3.1011	0.0014228	2.9727	0.0013638	458.7874632709064	93.167	2.7299	93.237	92.412	95.142	0.069862					206	64	5	0	0	0	0.884	2	9688	9688;9712		33.516	3.674	1	16426000	+		32281	27526	21329	21339	36762;36763	36762					0.09640196301768356
LLVATLMR	8	Unmodified	_LLVATLMR_					0	0	0			REV__ENST00000485551.5_1_1:35917324-35917369:-|nuORF	REV__ENST00000485551.5_1_1:35917324-35917369:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.7871398925781	2	458.786056	915.557558	1.7438	0.00080003	1.1153	0.0005117	2.8591	0.0013117	458.7865715116249	93.096	4.333	93.035	92.463	96.796	-0.061432					233	102	5	0	0	0	0.884	1	9857	9857		33.516	1.5607	1	18947000	+		32282	27526	21329	21339	36764	36764					0.09640196301768356
LLVATLMR	8	Unmodified	_LLVATLMR_					0	0	0			REV__ENST00000485551.5_1_1:35917324-35917369:-|nuORF	REV__ENST00000485551.5_1_1:35917324-35917369:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	458.7874755859375	2	458.786056	915.557558	0.80291	0.00036836	2.0876	0.00095776	2.8905	0.0013261	458.7870101504016	92.972	4.4564	93.018	92.411	96.867	0.045448					249	105	5	0	0	0	0.91005	2	9708	9708;9791		42.474	10.52	1	17992000	+		32283	27526	21329	21339	36765;36766	36765					0.09640196301768356
LLVATLMR	8	Unmodified	_LLVATLMR_					0	0	0			REV__ENST00000485551.5_1_1:35917324-35917369:-|nuORF	REV__ENST00000485551.5_1_1:35917324-35917369:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7877502441406	2	458.786056	915.557558	0.6747	0.00030954	3.1519	0.0014461	3.8266	0.0017556	458.78743118260775	92.703	1.6363	93.149	92.689	94.326	0.44662					124	39	4	0	0	0	0.87479	1	11033	11033		30.504	0.6621	1	5092100	+		32284	27526	21329	21339	36767	36767					0.09640196301768356
LLVAVHYPL	9	Unmodified	_LLVAVHYPL_					0	0	0			REV__ENSG00000144476|ENST00000272928|ACKR3	REV__ENSG00000144476|ENST00000272928|ACKR3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.807861328125	2	512.813128	1023.6117	-0.47744	-0.00024484	0.79756	0.000409	0.32012	0.00016416	512.8133220322351	46.412	0.97166	47.335	47.069	48.041	0.92315					32	22	2	0	0	0	0.20789	1	4432	4432		21.702	8.2483	1	3197700	+		32285	19893	21330	21340	36768	36768					0.10084111724984268
LLVAVIFVVF	10	Unmodified	_LLVAVIFVVF_					0	0	0			REV__ENSG00000173530|ENST00000312584|TNFRSF10D	REV__ENSG00000173530|ENST00000312584|TNFRSF10D	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3404541015625	2	560.362453	1118.71035	0.39554	0.00022164	4.0006	0.0022418	4.3961	0.0024634	560.3651392013211	102.59	0.20934	102.79	102.73	102.94	0.19484					7	4	2	0	0	0	0.37624	1	10818	10818		19.36	0	1	51809	+		32286	21930	21331	21341	36769	36769					0.1557471497003462
LLVAVLVMPWK	11	Unmodified	_LLVAVLVMPWK_					0	0	0		ENSG00000184845|ENST00000393752|DRD1	ENSG00000184845|ENST00000393752|DRD1	ENSG00000184845|ENST00000393752|DRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8939819335938	2	634.893595	1267.77264	1.4999	0.00095225	-3.4828	-0.0022112	-1.9829	-0.001259	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.72228	1	11515	11515		27.882	0.83493	1	68597000			32287	7644	21332	21342	36770	36770					0.1494611804669148
LLVAVLVMPWK	11	Unmodified	_LLVAVLVMPWK_					0	0	0		ENSG00000184845|ENST00000393752|DRD1	ENSG00000184845|ENST00000393752|DRD1	ENSG00000184845|ENST00000393752|DRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8929443359375	2	634.893595	1267.77264	-1.1756	-0.00074638	-0.73005	-0.0004635	-1.9057	-0.0012099	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.67493	1	11394	11394		35.618	1.4457	1	66671000			32288	7644	21332	21342	36771	36771					0.1494611804669148
LLVAVRLHT	9	Unmodified	_LLVAVRLHT_					0	0	0		ENST00000428008.5_1_20:47895203-47895257:+|nuORF	ENST00000428008.5_1_20:47895203-47895257:+|nuORF	ENST00000428008.5_1_20:47895203-47895257:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.327392578125	2	511.329476	1020.6444	-0.73647	-0.00037658	-3.6891	-0.0018863	-4.4256	-0.0022629	511.3274858429374	97.597	1.7759	97.597	97.074	98.849	0					91	42	3	0	0	0	0.76996	3	9804	9793;9804;9854		33.516	9.3128	1	585290			32289	11589	21333	21343	36772;36773;36774	36773					0.13490318847846083
LLVAVRLHT	9	Unmodified	_LLVAVRLHT_					0	0	0		ENST00000428008.5_1_20:47895203-47895257:+|nuORF	ENST00000428008.5_1_20:47895203-47895257:+|nuORF	ENST00000428008.5_1_20:47895203-47895257:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.3275451660156	2	511.329476	1020.6444	-0.33604	-0.00017183	-4.3544	-0.0022265	-4.6904	-0.0023984	511.32714059375644	97.081	2.0161	97.312	96.825	98.841	0.23103					133	46	4	0	0	0	0.76255	6	9995	9995;10007;10019;10031;10044;10067		35.618	6.4687	1	3439200			32290	11589	21333	21343	36775;36776;36777;36778;36779;36780	36775					0.13490318847846083
LLVAVRLHT	9	Unmodified	_LLVAVRLHT_					0	0	0		ENST00000428008.5_1_20:47895203-47895257:+|nuORF	ENST00000428008.5_1_20:47895203-47895257:+|nuORF	ENST00000428008.5_1_20:47895203-47895257:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.3270568847656	2	511.329476	1020.6444	-1.5781	-0.00080692	-3.0137	-0.001541	-4.5918	-0.0023479	511.3278411382384	97.118	1.95	97.32	96.964	98.914	0.20206					112	44	4	0	0	0	0.76996	3	10062	9954;9964;10062		33.516	5.2613	1	1123400			32291	11589	21333	21343	36781;36782;36783	36783					0.13490318847846083
LLVAVVAMAG	10	Unmodified	_LLVAVVAMAG_					0	0	0			REV__nc|ENSG00000100324|Q15750-2|TAB1	REV__nc|ENSG00000100324|Q15750-2|TAB1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2879943847656	2	472.285889	942.557224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.99	1	113.02	112.52	113.52	0.030602								0	0	0	0.45132	1	13657	13657		26.796	1.3459	1		+		32292	17169	21334	21344	36784	36784					0.08364776581913702
LLVCGILWY	9	Unmodified	_LLVCGILWY_					0	0	0		ENST00000216455.8_1_14:58711555-58711642:+|nuORF	ENST00000216455.8_1_14:58711555-58711642:+|nuORF	ENST00000216455.8_1_14:58711555-58711642:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.299560546875	2	540.301539	1078.58852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.532	1	57.637	57.137	58.137	0.1055								0	0	0	0.30219	1	4877	4877		29.842	0	1				32293	9140	21335	21345	36785	36785					0.052373496160271316
LLVCICFVNI	10	Unmodified	_LLVCICFVNI_					0	0	0		ENST00000469979.6_1_8:133829083-133829332:+|nuORF	ENST00000469979.6_1_8:133829083-133829332:+|nuORF	ENST00000469979.6_1_8:133829083-133829332:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.3244018554688	2	568.813956	1135.61336	-0.33028	-0.00018787	-3.3821	-0.0019238	-3.7123	-0.0021116	569.3120668126	58.129	0.76871	58.113	57.811	58.58	-0.01643					80	32	4	0	0	0	0.86589	1	4954	4954		29.15	1.2673	1	146260			32294	12212	21336	21346	36786	36786					0.05097661427089406
LLVDAKGL	8	Unmodified	_LLVDAKGL_					0	0	0			REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	414.76171875	2	414.763104	827.511654	-1.1711	-0.00048571	-2.0434	-0.00084752	-3.2144	-0.0013332	414.7622083520732	88.685	2.6185	88.685	88.073	90.692	0					180	60	5	0	0	0	0.87922	1	8581	8581		31.955	1.4512	1	6770700	+		32295	29051	21337	21347	36787	36787					0.09099874391188223
LLVDGEPVV	9	Unmodified	_LLVDGEPVV_					0	0	0			REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7691650390625	2	470.771126	939.527698	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.055	1	81.161	80.661	81.661	0.10527								0	0	0	0.30678	1	7704	7704		42.474	3.6683	1		+		32296	15561	21338	21348	36788	36788					0.0555153583743504
LLVEFFRQPYF	11	Unmodified	_LLVEFFRQPYF_					0	0	0			REV__nc|ENSG00000133317|Q96DT0-2|LGALS12	REV__nc|ENSG00000133317|Q96DT0-2|LGALS12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.93060302734375	3	486.930851	1457.77072	-1.8417	-0.00089677	2.9792	0.0014507	1.1375	0.0005539	486.93222838305667	30.711	1.274	30.711	30.137	31.411	0					107	45	3	0	0	0	0.76892	1	1430	1430		17.833	1.1158	1	376410	+		32297	19074	21339	21349	36789	36789					0.06014780562463784
LLVEFPLRPVP	11	Unmodified	_LLVEFPLRPVP_					0	0	0			REV__ENSG00000144031|ENST00000360589|ANKRD53	REV__ENSG00000144031|ENST00000360589|ANKRD53	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.895263671875	2	640.392273	1278.76999	-0.69345	-0.00044408	2.0468	0.0013107	1.3533	0.00086667	640.3933606010097	53.872	1.0072	53.872	53.507	54.514	0					69	30	3	0	0	0	0.7342	1	4488	4488		25.574	4.6271	1	206080	+		32298	19866	21340	21350	36790	36790					0.14175985913402656
LLVEFPLRPVP	11	Unmodified	_LLVEFPLRPVP_					0	0	0			REV__ENSG00000144031|ENST00000360589|ANKRD53	REV__ENSG00000144031|ENST00000360589|ANKRD53	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3927001953125	2	640.392273	1278.76999	2.3199	0.0014856	-1.2982	-0.00083133	1.0217	0.00065431	640.3913086567981	50.89	1.1946	51.642	51.12	52.315	0.75174					85	28	4	0	0	0	0.72106	1	5025	5025		28.081	1.0342	1	1438200	+		32299	19866	21340	21350	36791	36791					0.14175985913402656
LLVEKLVPLL	10	Unmodified	_LLVEKLVPLL_					0	0	0			REV__ENST00000394224.3_1_11:65407601-65408454:+|nuORF	REV__ENST00000394224.3_1_11:65407601-65408454:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.8533935546875	2	568.886293	1135.75803	1.5188	0.00086404	2.8849	0.0016412	4.4038	0.0025052	568.8867612979949	102.05	0.21126	102.1	101.93	102.14	0.044182					7	4	2	0	0	0	0.37624	1	11018	11018		29.15	1.2673	1	61682	+		32300	26077	21341	21351	36792	36792					0.19558369170226797
LLVEKTCLN	9	Unmodified	_LLVEKTCLN_					0	0	0			REV__nc|ENSG00000154188|Q15389-2|ANGPT1	REV__nc|ENSG00000154188|Q15389-2|ANGPT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7932739257812	2	516.791535	1031.56852	1.5571	0.00080467	2.1758	0.0011244	3.7328	0.0019291	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.78983	1	9200	9200		27.882	1.1893	1	834930	+		32301	29942	21342	21352	36793	36793					0.05399553885399655
LLVEVLGGL	9	Unmodified	_LLVEVLGGL_					0	0	0			REV__nc|ENSG00000290691|A6NGW2|STRCP1	REV__nc|ENSG00000290691|A6NGW2|STRCP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7930603027344	2	456.791861	911.569169	-0.85953	-0.00039263	3.5719	0.0016316	2.7123	0.001239	456.7934335420697	36.323	3.5767	36.267	33.824	37.401	-0.055901					213	80	5	0	0	0	0.7932	1	2544	2544		26.796	1.3459	1	4833100	+		32302	23835	21343	21353	36794	36794					0.10984716596760791
LLVEVLGGL	9	Unmodified	_LLVEVLGGL_					0	0	0			REV__nc|ENSG00000290691|A6NGW2|STRCP1	REV__nc|ENSG00000290691|A6NGW2|STRCP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79315185546875	2	456.791861	911.569169	0.19113	8.7308E-05	2.7762	0.0012681	2.9673	0.0013554	456.7929923736529	37.659	1.0878	37.758	37.313	38.401	0.099277					98	37	4	0	0	0	0.7932	1	2118	2118		20.482	1.1219	1	1361500	+		32303	23835	21343	21353	36795	36795					0.10984716596760791
LLVFGARG	8	Unmodified	_LLVFGARG_					0	0	0		nc|ENSG00000162073|Q8N4S7-3|PAQR4;nc|ENSG00000162073|Q8N4S7-2|PAQR4;ENSG00000162073|ENST00000318782|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	416.75506591796875	2	416.755613	831.496673	-1.8373	-0.00076571	0.26309	0.00010964	-1.5742	-0.00065607	416.7557703392063	69.009	0.92305	69.144	68.682	69.606	0.13521					98	39	4	0	0	0	0.87276	1	6235	6235		29.842	1.5873	1	1065300			32304	5667	21344	21354	36796	36796					0.07418427313859866
LLVFGARG	8	Unmodified	_LLVFGARG_					0	0	0		nc|ENSG00000162073|Q8N4S7-3|PAQR4;nc|ENSG00000162073|Q8N4S7-2|PAQR4;ENSG00000162073|ENST00000318782|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	416.7547302246094	2	416.755613	831.496673	-1.2346	-0.00051453	0.0008669	3.6128E-07	-1.2337	-0.00051417	416.7554996796795	69.232	0.75401	69.298	68.944	69.698	0.065506					85	35	3	0	0	0	0.86791	1	6237	6237		28.254	6.5519	1	1082800			32305	5667	21344	21354	36797	36797					0.07418427313859866
LLVFIIKGY	9	Unmodified	_LLVFIIKGY_					0	0	0			REV__nc|ENSG00000170180|P02724-3|GYPA	REV__nc|ENSG00000170180|P02724-3|GYPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.340087890625	2	533.338978	1064.6634	1.2441	0.00066355	1.0363	0.00055269	2.2804	0.0012162	533.3394000177375	99.114	2.7086	99.162	98.677	101.39	0.047531					171	63	4	0	0	0	0.7932	2	10643	10607;10643		19.36	1.995	1	3009900	+		32306	21633	21345	21355	36798;36799	36799					0.13365855418919637
LLVFIIKGY	9	Unmodified	_LLVFIIKGY_					0	0	0			REV__nc|ENSG00000170180|P02724-3|GYPA	REV__nc|ENSG00000170180|P02724-3|GYPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.3399658203125	2	533.338978	1064.6634	-0.0064483	-3.4392E-06	2.1801	0.0011627	2.1736	0.0011593	533.3400284044101	98.996	2.9551	99.219	98.699	101.65	0.22262					166	70	4	0	0	0	0.7932	1	10338	10338		19.36	6.4008	1	2531600	+		32307	21633	21345	21355	36800	36800					0.13365855418919637
LLVFIIKGY	9	Unmodified	_LLVFIIKGY_					0	0	0			REV__nc|ENSG00000170180|P02724-3|GYPA	REV__nc|ENSG00000170180|P02724-3|GYPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	533.3402709960938	2	533.338978	1064.6634	0.82147	0.00043812	1.5391	0.00082084	2.3605	0.001259	533.3397014288719	99.113	2.1038	99.27	98.724	100.83	0.15659					144	48	4	0	0	0	0.7932	2	10305	10305;10341		19.36	5.5846	1	2216600	+		32308	21633	21345	21355	36801;36802	36801					0.13365855418919637
LLVFIIKGY	9	Unmodified	_LLVFIIKGY_					0	0	0			REV__nc|ENSG00000170180|P02724-3|GYPA	REV__nc|ENSG00000170180|P02724-3|GYPA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.3396606445312	2	533.338978	1064.6634	1.7726	0.00094538	1.0666	0.00056887	2.8392	0.0015142	533.3394684575402	98.908	1.4701	99.269	98.774	100.24	0.36137					81	36	3	0	0	0	0.7932	1	11915	11915		18.324	4.5491	1	1093200	+		32309	21633	21345	21355	36803	36803					0.13365855418919637
LLVFIMSLL	9	Unmodified	_LLVFIMSLL_					0	0	0		ENSG00000157350|ENST00000342907|ST3GAL2	ENSG00000157350|ENST00000342907|ST3GAL2	ENSG00000157350|ENST00000342907|ST3GAL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8269653320312	2	524.827389	1047.64023	0.82695	0.00043401	-0.94172	-0.00049424	-0.11477	-6.0234E-05	524.826769505368	102.16	1.0919	102.29	101.89	102.98	0.13523					72	26	3	0	0	0	0.7932	1	10724	10724		25.45	0	1	650470			32310	5422	21346	21356	36804	36804					0.11831093309933749
LLVFLNHCF	9	Unmodified	_LLVFLNHCF_					0	0	0		ENST00000554157.5_1_14:20757788-20760378:-|nuORF	ENST00000554157.5_1_14:20757788-20760378:-|nuORF	ENST00000554157.5_1_14:20757788-20760378:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.605224609375	2	553.296788	1104.57902	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.145	1	73.274	72.774	73.774	0.1292								0	0	0	0.31472	1	6726	6726		25.45	2.4077	1				32311	13716	21347	21357	36805	36805					0.03091581330477311
LLVFPWSI	8	Unmodified	_LLVFPWSI_					0	0	0			REV__ENSG00000174437|ENST00000539276|ATP2A2	REV__ENSG00000174437|ENST00000539276|ATP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7904968261719	2	487.789121	973.56369	0.54992	0.00026825	2.3468	0.0011447	2.8967	0.001413	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.91005	1	8295	8295		42.474	3.6683	1	633420	+		32312	21991	21348	21358	36806	36806					0.0758503780494948
LLVFPWSI	8	Unmodified	_LLVFPWSI_					0	0	0			REV__ENSG00000174437|ENST00000539276|ATP2A2	REV__ENSG00000174437|ENST00000539276|ATP2A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7908020019531	2	487.789121	973.56369	-0.24073	-0.00011743	3.4249	0.0016706	3.1842	0.0015532	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.92176	1	9750	9750		46.766	11.566	1	1981400	+		32313	21991	21348	21358	36807	36807					0.0758503780494948
LLVFVSFLK	9	Unmodified	_LLVFVSFLK_					0	0	0		ENST00000389912.6_1_14:70809385-70809436:-|nuORF	ENST00000389912.6_1_14:70809385-70809436:-|nuORF	ENST00000389912.6_1_14:70809385-70809436:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.3399658203125	2	533.338978	1064.6634	1.2441	0.00066355	1.0363	0.00055269	2.2804	0.0012162	533.3394000177375	99.114	2.7086	99.162	98.677	101.39	0.047531					171	63	4	0	0	0	0.77546	2	10619	10573;10619		31.955	5.1588	1	3009900			32314	10994	21349	21359	36808;36809	36809					0.133658554188969
LLVFVSFLK	9	Unmodified	_LLVFVSFLK_					0	0	0		ENST00000389912.6_1_14:70809385-70809436:-|nuORF	ENST00000389912.6_1_14:70809385-70809436:-|nuORF	ENST00000389912.6_1_14:70809385-70809436:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.3402099609375	2	533.338978	1064.6634	1.5408	0.00082178	1.186	0.00063251	2.7268	0.0014543	533.3395224888457	98.979	2.0217	99.342	98.893	100.91	0.36292					99	50	3	0	0	0	0.7932	1	12003	12003		20.947	0	1	1206500			32315	10994	21349	21359	36810	36810					0.133658554188969
LLVFWEIV	8	Unmodified	_LLVFWEIV_					0	0	0		ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8037109375	2	509.802229	1017.5899	-0.89954	-0.00045859	3.9055	0.001991	3.006	0.0015324	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.82464	2	8180	8180;8252		42.474	3.2216	1	1874600			32316	3572	21350	21360	36811;36812	36811					0.08181306976416636
LLVFWEIV	8	Unmodified	_LLVFWEIV_					0	0	0		ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.80364990234375	2	509.802229	1017.5899	0.66528	0.00033916	2.166	0.0011042	2.8313	0.0014434	509.80330176373235	84.326	2.5006	84.474	83.057	85.557	0.14794					163	57	4	0	0	0	0.86791	1	8193	8193		28.254	0.37203	1	928020			32317	3572	21350	21360	36813	36813					0.08181306976416636
LLVGAPQALAL	11	Unmodified	_LLVGAPQALAL_					0	0	0		nc|ENSG00000135424|Q13683-9|ITGA7;ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683|ITGA7;nc|ENSG00000135424|Q13683-3|ITGA7;ENST00000554359.1_1_12:56096799-56101466:-|nuORF;ENST00000554724.5_1_12:56094596-56105857:-|nuORF	nc|ENSG00000135424|Q13683-9|ITGA7	nc|ENSG00000135424|Q13683-9|ITGA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.340576171875	2	533.336967	1064.65938	3.0971	0.0016518	2.9068	0.0015503	6.0039	0.0032021	533.3384140007198	99.339	2.8367	99.285	98.69	101.53	-0.053741					182	66	5	0	0	0	0.72228	1	10842	10842		27.882	1.0861	1	3163800			32318	4017	21351	21361	36814	36814					0.1296376592517845
LLVGFTLSSTL	11	Unmodified	_LLVGFTLSSTL_					0	0	0			REV__ENST00000457253.1_1_6:28805954-28806077:-|nuORF	REV__ENST00000457253.1_1_6:28805954-28806077:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.843017578125	2	575.839539	1149.66453	1.6833	0.00096931	4.3447	0.0025019	6.028	0.0034712	575.8419126202111	90.702	2.7581	90.632	88.716	91.474	-0.069977					216	65	4	0	0	0	0.73893	1	9386	9386		24.519	0.31644	1	1939000	+		32319	26965	21352	21362	36815	36815					0.09568024997133762
LLVGGIVGT	9	Unmodified	_LLVGGIVGT_					0	0	0		ENSG00000281106|ENST00000629372|TMEM272	ENSG00000281106|ENST00000629372|TMEM272	ENSG00000281106|ENST00000629372|TMEM272	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	414.76171875	2	414.763104	827.511654	-1.9066	-0.00079078	-1.3201	-0.00054751	-3.2266	-0.0013383	414.7625113918511	88.263	2.5091	88.432	87.911	90.42	0.16923					168	58	4	0	0	0	0.76996	1	8809	8809		33.516	3.0119	1	7346500			32320	9051	21353	21363	36816	36816					0.09099874391188223
LLVGKPPQIG	10	Unmodified	_LLVGKPPQIG_					0	0	0			REV__nc|ENSG00000145375|Q8NB90-3|AFG2A	REV__nc|ENSG00000145375|Q8NB90-3|AFG2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.3272399902344	2	511.32386	1020.63317	2.4721	0.001264	3.8453	0.0019662	6.3174	0.0032303	511.3257127043103	97.291	2.1515	97.235	96.802	98.953	-0.055542					136	49	4	0	0	0	0.84112	2	10445	10445;10504		37.159	14.117	1	1837000	+		32321	19943	21354	21364	36817;36818	36817					0.12367496753711293
LLVGKYLFI	9	Unmodified	_LLVGKYLFI_					0	0	0			REV__ENST00000541473.1_1_11:61160710-61161501:+|nuORF	REV__ENST00000541473.1_1_11:61160710-61161501:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.3395385742188	2	533.338978	1064.6634	1.2441	0.00066355	1.0363	0.00055269	2.2804	0.0012162	533.3394000177375	99.114	2.7086	99.162	98.677	101.39	0.047531					171	63	4	0	0	0	0.7932	4	10679	10679;10704;10716;10778		26.796	8.4717	1	3009900	+		32322	22899	21355	21365	36819;36820;36821;36822	36819					0.13365855418874162
LLVGKYLFI	9	Unmodified	_LLVGKYLFI_					0	0	0			REV__ENST00000541473.1_1_11:61160710-61161501:+|nuORF	REV__ENST00000541473.1_1_11:61160710-61161501:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.33984375	2	533.338978	1064.6634	-0.0064483	-3.4392E-06	2.1801	0.0011627	2.1736	0.0011593	533.3400284044101	98.996	2.9551	99.219	98.699	101.65	0.22262					166	70	4	0	0	0	0.7932	3	10256	10256;10278;10302		26.796	7.4361	1	2531600	+		32323	22899	21355	21365	36823;36824;36825	36823					0.13365855418874162
LLVGKYLFI	9	Unmodified	_LLVGKYLFI_					0	0	0			REV__ENST00000541473.1_1_11:61160710-61161501:+|nuORF	REV__ENST00000541473.1_1_11:61160710-61161501:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.3399047851562	2	533.338978	1064.6634	1.5408	0.00082178	1.186	0.00063251	2.7268	0.0014543	533.3395224888457	98.979	2.0217	99.342	98.893	100.91	0.36292					99	50	3	0	0	0	0.7932	2	11978	11978;11990		19.36	3.7182	1	1206500	+		32324	22899	21355	21365	36826;36827	36826					0.13365855418874162
LLVGLRKLH	9	Unmodified	_LLVGLRKLH_					0	0	0			REV__nc|ENSG00000080561|Q9UJV3-2|MID2	REV__nc|ENSG00000080561|Q9UJV3-2|MID2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8267822265625	2	524.853119	1047.69168	2.9344	0.0015401	0.15683	8.2314E-05	3.0913	0.0016225	524.8537059695605	99.665	0.25547	99.611	99.524	99.779	-0.053734					6	5	2	0	0	0	0.20789	1	10809	10809		25.45	13.939	1	37430	+		32325	16804	21356	21366	36828	36828					0.1697459811882709
LLVGQNRN	8	Unmodified	_LLVGQNRN_					0	0	0			REV__nc|ENSG00000189056|P78509-3|RELN	REV__nc|ENSG00000189056|P78509-3|RELN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2635498046875	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.89962	1	8460	8460		38.806	5.9937	1	4511100	+		32326	23061	21357	21367	36829	36829					0.054357228488470355
LLVGQNRN	8	Unmodified	_LLVGQNRN_					0	0	0			REV__nc|ENSG00000189056|P78509-3|RELN	REV__nc|ENSG00000189056|P78509-3|RELN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.26104736328125	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.85277	1	7410	7410		25.45	0.93098	1	1262800	+		32327	23061	21357	21367	36830	36830					0.054357228488470355
LLVGQVNTVL	10	Unmodified	_LLVGQVNTVL_					0	0	0			REV__ENST00000492211.5_1_10:98984592-98984766:-|nuORF	REV__ENST00000492211.5_1_10:98984592-98984766:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.3291015625	2	528.326599	1054.63865	-1.5179	-0.00080196	3.9397	0.0020815	2.4218	0.0012795	528.328271416259	37.858	1.164	37.858	37.395	38.559	0					41	28	2	0	0	0	0.85939	1	2383	2383		23.042	0	1	386700	+		32328	27671	21358	21368	36831	36831					0.11351175545519254
LLVGRLVIVAL	11	Unmodified	_LLVGRLVIVAL_					0	0	0		nc|ENSG00000154025|A0PJK1-4|SLC5A10;nc|ENSG00000154025|A0PJK1-5|SLC5A10;nc|ENSG00000154025|A0PJK1-2|SLC5A10;ENSG00000154025|ENST00000395645|SLC5A10	nc|ENSG00000154025|A0PJK1-4|SLC5A10	nc|ENSG00000154025|A0PJK1-4|SLC5A10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.3729858398438	2	583.405184	1164.79581	-2.0016	-0.0011677	-2.1719	-0.0012671	-4.1735	-0.0024348	583.4040328636769	43.194	1.3405	43.627	42.725	44.066	0.4334					44	32	3	0	0	0	0.17404	1	3908	3908		35.618	8.9254	1	363350			32329	15001	21359	21369	36832	36832					0.22000880155701452
LLVGRLVIVAL	11	Unmodified	_LLVGRLVIVAL_					0	0	0		nc|ENSG00000154025|A0PJK1-4|SLC5A10;nc|ENSG00000154025|A0PJK1-5|SLC5A10;nc|ENSG00000154025|A0PJK1-2|SLC5A10;ENSG00000154025|ENST00000395645|SLC5A10	nc|ENSG00000154025|A0PJK1-4|SLC5A10	nc|ENSG00000154025|A0PJK1-4|SLC5A10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.369873046875	2	583.405184	1164.79581	-2.237	-0.0013051	-1.6723	-0.0009756	-3.9093	-0.0022807	583.4042216944213	42.965	1.4565	43.662	42.81	44.267	0.69754					43	35	2	0	0	0	0.17318	1	3931	3931		19.104	0	1	405780			32330	15001	21359	21369	36833	36833					0.22000880155701452
LLVGVKSPSLP	11	Unmodified	_LLVGVKSPSLP_					0	0	0		ENSG00000196208|ENST00000381486|GREB1;nc|ENSG00000196208|Q4ZG55-2|GREB1;nc|ENSG00000196208|Q4ZG55-3|GREB1	ENSG00000196208|ENST00000381486|GREB1	ENSG00000196208|ENST00000381486|GREB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.353271484375	2	555.350074	1108.6856	3.1602	0.001755	2.6303	0.0014608	5.7905	0.0032158	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.68378	1	10967	10967		34.173	6.2903	1	5616800			32331	8026	21360	21370	36834	36834					0.13560035096656975
LLVGVPAGS	9	Unmodified	_LLVGVPAGS_					0	0	0		ENSG00000242616|ENST00000374293|GNG10;nc|ENSG00000059769|Q9H1X3-3|DNAJC25	ENSG00000242616|ENST00000374293|GNG10	ENSG00000242616|ENST00000374293|GNG10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2580261230469	2	406.747453	811.480354	1.8843	0.00076645	2.1446	0.00087232	4.029	0.0016388	406.7483498321263	56.022	0.42134	56.052	55.728	56.15	0.030838					16	10	2	0	0	0	0.20789	1	5055	5055		18.324	14.008	1	91436			32332	8800	21361	21371	36835	36835					0.06707301357084816
LLVGVPAGS	9	Unmodified	_LLVGVPAGS_					0	0	0		ENSG00000242616|ENST00000374293|GNG10;nc|ENSG00000059769|Q9H1X3-3|DNAJC25	ENSG00000242616|ENST00000374293|GNG10	ENSG00000242616|ENST00000374293|GNG10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.747453	811.480354	-1.8734	-0.00076198	6.7576	0.0027486	4.8843	0.0019867	406.74993665207825	56.216	0.49058	56.288	55.825	56.315	0.071835	0.12157	0.0022319	NaN	18.324	36	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115660			32333	8800	21361	21371							0.06707301357084816
LLVHAKCV	8	Unmodified	_LLVHAKCV_					0	0	0		ENST00000539644.5_1_12:124497619-124497844:+|nuORF	ENST00000539644.5_1_12:124497619-124497844:+|nuORF	ENST00000539644.5_1_12:124497619-124497844:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.76812744140625	2	441.765123	881.515694	4.6911	0.0020724	1.7355	0.00076667	6.4266	0.0028391	441.76590394209916	107.02	1.0661	107.17	106.81	107.88	0.14929					95	39	4	0	0	0	0.82464	1	13088	13088		21.702	0	1	3173300			32334	13480	21362	21372	36836	36836					0.07019640613248157
LLVHFLLPLL	10	Unmodified	_LLVHFLLPLL_					0	0	0		ENST00000245479.2_1_17:70121293-70121485:+|nuORF	ENST00000245479.2_1_17:70121293-70121485:+|nuORF	ENST00000245479.2_1_17:70121293-70121485:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3428344726562	2	589.389003	1176.76345	-1.324	-0.00078037	-2.0907	-0.0012323	-3.4148	-0.0020126	589.3873850938935	93.693	0.21526	93.891	93.826	94.041	0.19827					7	4	2	0	0	0	0.37624	1	9495	9495		7.6903	0	1	86252			32335	9269	21363	21373	36837	36837					0.1821409275271435
LLVHNLPQNLA	11	Unmodified	_LLVHNLPQNLA_					0	0	0		nc|ENSG00000243137|Q00888-3|PSG4;nc|ENSG00000243137|Q00888-2|PSG4;ENSG00000243137|ENST00000405312|PSG4;ENST00000401992.1_1_19:43687564-43690557:-|nuORF;ENSG00000204941|ENST00000342951|PSG5;ENST00000600817.5_1_19:43679971-43690557:-|nuORF;ENSG00000221826|ENST00000327495|PSG3;ENST00000597009.5_1_19:43236759-43244536:-|nuORF	nc|ENSG00000243137|Q00888-3|PSG4;ENSG00000204941|ENST00000342951|PSG5;ENSG00000221826|ENST00000327495|PSG3;ENST00000597009.5_1_19:43236759-43244536:-|nuORF	ENSG00000204941|ENST00000342951|PSG5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	411.244384765625	3	411.243429	1230.70846	-1.9177	-0.00078865	2.2542	0.00092704	0.33652	0.00013839	411.24413804538176	102.99	0.51112	103.11	102.84	103.35	0.11495					25	12	3	0	0	0	0.71207	1	10803	10803		29.551	0.38069	1	855770			32336	8499;15281;8669;14344	21364	21374	36838	36838					0.10233054214154436
LLVHRFLPY	9	Unmodified	_LLVHRFLPY_					0	0	0		ENSG00000179913|ENST00000318683|B3GNT3	ENSG00000179913|ENST00000318683|B3GNT3	ENSG00000179913|ENST00000318683|B3GNT3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	579.2589111328125	2	579.345126	1156.6757	-2.2868	-0.0013249	-2.8335	-0.0016416	-5.1203	-0.0029664	579.3437903091586	43.718	0.27974	44.492	44.303	44.582	0.7738					14	6	3	0	0	0	0.20789	1	3959	3959		26.796	11.931	1	246840			32337	7303	21365	21375	36839	36839					0.10362891881936775
LLVHRFLPY	9	Unmodified	_LLVHRFLPY_					0	0	0		ENSG00000179913|ENST00000318683|B3GNT3	ENSG00000179913|ENST00000318683|B3GNT3	ENSG00000179913|ENST00000318683|B3GNT3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	579.345126	1156.6757	-1.5653	-0.00090683	-2.7325	-0.001583	-4.2977	-0.0024899	579.3436200828145	43.955	0.24279	44.406	44.239	44.482	0.45024	-0.04295	7.339E-05	NaN	19.36	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	312740			32338	7303	21365	21375							0.10362891881936775
LLVHSKNKNKA	11	Unmodified	_LLVHSKNKNKA_					0	0	0			REV__ENST00000392952.7_1_10:116195035-116195137:-|nuORF	REV__ENST00000392952.7_1_10:116195035-116195137:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.2975158691406	3	417.922578	1250.7459	-1.0838	-0.00045294	-4.4421	-0.0018564	-5.5259	-0.0023094	418.2550615344663	65.144	0.1899	65.182	65.082	65.272	0.037849					8	6	2	0	0	0	0.17521	1	5770	5770		22.562	0	1	35563	+		32339	26037	21366	21376	36840	36840					0.13056145479754377
LLVHVLLICVF	11	Unmodified	_LLVHVLLICVF_					0	0	0			REV__ENST00000570187.1_1_16:50338327-50342394:+|nuORF	REV__ENST00000570187.1_1_16:50338327-50342394:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8926391601562	2	634.893595	1267.77264	1.9684	0.0012497	-3.6098	-0.0022919	-1.6415	-0.0010422	634.8913842364989	105.48	2.7267	105.63	104.93	107.65	0.15583					244	94	5	0	0	0	0.63354	1	12819	12819		40.573	1.3198	1	2461800	+		32340	18448	21367	21377	36841	36841					0.14946118046714219
LLVHVRRR	8	Unmodified	_LLVHVRRR_					0	0	0		nc|ENSG00000090932|Q9NYJ7|DLL3;ENSG00000090932|ENST00000356433|DLL3	nc|ENSG00000090932|Q9NYJ7|DLL3	nc|ENSG00000090932|Q9NYJ7|DLL3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8269653320312	2	524.846159	1047.67777	-1.5341	-0.00080517	-2.7917	-0.0014652	-4.3258	-0.0022704	524.8433098381472	99.233	0.53329	99.419	98.987	99.521	0.18582					14	12	2	0	0	0	0.4196	1	10279	10279		8.2313	0	1	274640			32341	1661	21368	21378	36842	36842					0.15583365410407168
LLVIAPDVVKS	11	Unmodified	_LLVIAPDVVKS_					0	0	0			REV__ENSG00000183423|ENST00000594814|LRIT3	REV__ENSG00000183423|ENST00000594814|LRIT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.3665771484375	2	577.363182	1152.71181	3.0575	0.0017653	2.5466	0.0014703	5.6041	0.0032356	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.7342	1	11188	11188		25.574	0.12388	1	11111000	+		32342	22605	21369	21379	36843	36843					0.141563042681355
LLVIAPDVVKS	11	Unmodified	_LLVIAPDVVKS_					0	0	0			REV__ENSG00000183423|ENST00000594814|LRIT3	REV__ENSG00000183423|ENST00000594814|LRIT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.3667602539062	2	577.363182	1152.71181	2.1383	0.0012346	4.0903	0.0023616	6.2285	0.0035961	577.3654203694961	102.01	1.0705	102.33	101.93	103.01	0.32511					73	24	4	0	0	0	0.73621	1	12475	12475		25.126	2.0835	1	1980600	+		32343	22605	21369	21379	36844	36844					0.141563042681355
LLVINRPRAMA	11	Unmodified	_LLVINRPRAMA_					0	0	0		ENST00000318524.6_1_9:33294576-33294720:+|nuORF	ENST00000318524.6_1_9:33294576-33294720:+|nuORF	ENST00000318524.6_1_9:33294576-33294720:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.8836669921875	2	627.379175	1252.7438	0.9795	0.00061452	3.7075	0.002326	4.687	0.0029405	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.72918	1	13016	13016		26.693	0	1	19815000			32344	10009	21370	21380	36845	36845					0.127533934703024
LLVINRPRAMA	11	Unmodified	_LLVINRPRAMA_					0	0	0		ENST00000318524.6_1_9:33294576-33294720:+|nuORF	ENST00000318524.6_1_9:33294576-33294720:+|nuORF	ENST00000318524.6_1_9:33294576-33294720:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.384033203125	2	627.379175	1252.7438	6.5869	0.0041325	-1.1306	-0.00070932	5.4563	0.0034232	627.3783410585748	112.58	0.5701	112.61	112.27	112.84	0.032707					46	19	3	0	0	0	0.80228	1	13619	13619		10.866	0	1	89780			32345	10009	21370	21380	36846	36846					0.127533934703024
LLVIPIPF	8	Unmodified	_LLVIPIPF_					0	0	0		nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3011474609375	2	456.301865	910.589176	-1.9609	-0.00089476	0.42413	0.00019353	-1.5368	-0.00070123	456.3019244318546	33.431	1.5568	33.431	33.135	34.692	0					145	44	4	0	0	0	0.80127	8	1720	1695;1702;1711;1720;1729;1740;1760;1786		24.504	7.799	1	2313000			32346	14994	21371	21381	36847;36848;36849;36850;36851;36852;36853;36854	36850					0.1303051232737289
LLVIPIPF	8	Unmodified	_LLVIPIPF_					0	0	0		nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3014221191406	2	456.301865	910.589176	-1.9367	-0.0008837	0.44582	0.00020343	-1.4908	-0.00068028	456.30190517421295	35.075	2.0362	35.075	34.654	36.69	0					139	52	4	0	0	0	0.80127	6	1914	1905;1914;1927;1991;2023;2033		16.705	6.5202	1	943370			32347	14994	21371	21381	36855;36856;36857;36858;36859;36860	36856					0.1303051232737289
LLVIPIPF	8	Unmodified	_LLVIPIPF_					0	0	0		nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30126953125	2	456.301865	910.589176	-1.7707	-0.00080797	-0.25895	-0.00011816	-2.0296	-0.00092612	456.3016315256623	46.489	1.398	46.489	46.06	47.458	0					92	40	3	0	0	0	0.88393	1	3495	3495		33.493	2.9893	1	435240			32348	14994	21371	21381	36861	36861					0.1303051232737289
LLVIPIPF	8	Unmodified	_LLVIPIPF_					0	0	0		nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30108642578125	2	456.301865	910.589176	-0.44225	-0.0002018	-0.9748	-0.0004448	-1.4171	-0.0006466	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.88393	1	2035	2035		33.493	4.3434	1	1715600			32349	14994	21371	21381	36862	36862					0.1303051232737289
LLVIPIPF	8	Unmodified	_LLVIPIPF_					0	0	0		nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3009338378906	2	456.301865	910.589176	-1.267	-0.00057813	-0.1173	-5.3523E-05	-1.3843	-0.00063166	456.3016565043114	33.346	1.5471	33.392	33.095	34.642	0.045853					160	67	4	0	0	0	0.91333	1	1664	1664		43.626	10.133	1	1558600			32350	14994	21371	21381	36863	36863					0.1303051232737289
LLVIPIPF	8	Unmodified	_LLVIPIPF_					0	0	0		nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30108642578125	2	456.301865	910.589176	-1.2401	-0.00056585	-0.39897	-0.00018205	-1.6391	-0.0007479	456.30156916683757	47.995	1.2721	48.018	47.652	48.924	0.02227					72	35	3	0	0	0	0.80127	1	3630	3630		16.705	2.9296	1	212280			32351	14994	21371	21381	36864	36864					0.1303051232737289
LLVIPIPF	8	Unmodified	_LLVIPIPF_					0	0	0		nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	nc|ENSG00000152061|Q5R372-3|RABGAP1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30108642578125	2	456.301865	910.589176	0.18552	8.4654E-05	-1.5705	-0.0007166	-1.3849	-0.00063195	456.3010022539405	33.29	1.7406	33.257	32.935	34.675	-0.032681					212	75	4	0	0	0	0.84567	1	1596	1596		24.504	0.30126	1	1700700			32352	14994	21371	21381	36865	36865					0.1303051232737289
LLVIRPQMH	9	Unmodified	_LLVIRPQMH_					0	0	0			REV__nc|ENSG00000205726|Q15811-5|ITSN1	REV__nc|ENSG00000205726|Q15811-5|ITSN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8304443359375	2	553.828786	1105.64302	2.0416	0.0011307	0.42617	0.00023602	2.4678	0.0013667	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.78058	1	9373	9373		30.504	1.3541	1	5457600	+		32353	30173	21372	21382	36866	36866					0.09442361487435846
LLVIRPQMH	9	Unmodified	_LLVIRPQMH_					0	0	0			REV__nc|ENSG00000205726|Q15811-5|ITSN1	REV__nc|ENSG00000205726|Q15811-5|ITSN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8301391601562	2	553.828786	1105.64302	1.198	0.00066348	1.0602	0.00058716	2.2582	0.0012506	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.77546	2	9038	9038;9086		31.955	4.0726	1	1689700	+		32354	30173	21372	21382	36867;36868	36867					0.09442361487435846
LLVIRPQMH	9	Unmodified	_LLVIRPQMH_					0	0	0			REV__nc|ENSG00000205726|Q15811-5|ITSN1	REV__nc|ENSG00000205726|Q15811-5|ITSN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.830078125	2	553.828786	1105.64302	-1.4397	-0.00079733	3.9475	0.0021862	2.5078	0.0013889	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.77546	2	8886	8886;9064		31.955	1.4512	1	5453100	+		32355	30173	21372	21382	36869;36870	36869					0.09442361487435846
LLVISLLVTY	10	Unmodified	_LLVISLLVTY_					0	0	0		nc|ENSG00000130055|Q9HCC8-2|GDPD2;ENSG00000130055|ENST00000374382|GDPD2;nc|ENSG00000130055|Q9HCC8-3|GDPD2	nc|ENSG00000130055|Q9HCC8-2|GDPD2	nc|ENSG00000130055|Q9HCC8-2|GDPD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3630981445312	2	567.36265	1132.71075	-0.8743	-0.00049604	2.4089	0.0013667	1.5346	0.00087069	567.3638800486743	44.538	2.1986	44.515	43.895	46.093	-0.023079					155	51	5	0	0	0	0.85694	1	3503	3503		21.96	0	1	2273000			32356	3620	21373	21383	36871	36871					0.14970089899247796
LLVISLLVTY	10	Unmodified	_LLVISLLVTY_					0	0	0		nc|ENSG00000130055|Q9HCC8-2|GDPD2;ENSG00000130055|ENST00000374382|GDPD2;nc|ENSG00000130055|Q9HCC8-3|GDPD2	nc|ENSG00000130055|Q9HCC8-2|GDPD2	nc|ENSG00000130055|Q9HCC8-2|GDPD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3633422851562	2	567.36265	1132.71075	0.20972	0.00011899	1.3081	0.00074215	1.5178	0.00086113	567.3632440181018	44.63	2.2677	44.626	43.93	46.198	-0.0041618					153	53	5	0	0	0	0.85939	1	3450	3450		23.042	0	1	2377000			32357	3620	21373	21383	36872	36872					0.14970089899247796
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8172607421875	2	531.817021	1061.61949	-0.78788	-0.00041901	0.64305	0.00034198	-0.14483	-7.7026E-05	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.76402	1	8408	8408		35.201	6.0512	1	859730			32358	6825	21374	21384	36873	36873					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8168334960938	2	531.817021	1061.61949	-0.033207	-1.766E-05	0.25707	0.00013671	0.22386	0.00011905	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.76402	2	8722	8699;8722		35.201	6.8227	1	1254600			32359	6825	21374	21384	36874;36875	36875					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8165283203125	2	531.817021	1061.61949	1.595	0.00084823	-1.8995	-0.0010102	-0.30451	-0.00016195	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.76402	4	8916	8881;8893;8916;9024		35.201	6.3143	1	1345000			32360	6825	21374	21384	36876;36877;36878;36879	36878					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8167724609375	2	531.817021	1061.61949	1.8637	0.00099113	-2.1758	-0.0011571	-0.31214	-0.000166	531.8157444108199	88.686	4.0119	88.613	87.337	91.349	-0.07238					352	95	5	0	0	0	0.76402	4	9130	9097;9109;9130;9168		35.201	9.4311	1	4423300			32361	6825	21374	21384	36880;36881;36882;36883	36882					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8167724609375	2	531.817021	1061.61949	1.0296	0.00054754	-1.308	-0.00069562	-0.27845	-0.00014808	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.7932	4	8839	8755;8792;8839;8863		26.796	4.8362	1	1241100			32362	6825	21374	21384	36884;36885;36886;36887	36886					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8168334960938	2	531.817021	1061.61949	1.1723	0.00062347	-1.4726	-0.00078315	-0.30025	-0.00015968	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.76402	3	8972	8972;9006;9185		35.201	2.5934	1	4413000			32363	6825	21374	21384	36888;36889;36890	36888					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8168334960938	2	531.817021	1061.61949	-0.04786	-2.5453E-05	-0.38969	-0.00020724	-0.43755	-0.0002327	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.76996	2	8759	8759;8878		33.516	0.70317	1	4916300			32364	6825	21374	21384	36891;36892	36891					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8165283203125	2	531.817021	1061.61949	0.70533	0.00037511	-1.0774	-0.00057299	-0.37209	-0.00019788	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.76402	2	8518	8493;8518		35.201	6.0512	1	1163300			32365	6825	21374	21384	36893;36894	36894					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8168334960938	2	531.817021	1061.61949	0.7269	0.00038658	-1.0502	-0.00055851	-0.3233	-0.00017194	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.76996	3	8899	8756;8899;8984		33.516	3.1979	1	4496300			32366	6825	21374	21384	36895;36896;36897	36896					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8167114257812	2	531.817021	1061.61949	-1.4587	-0.00077575	1.1279	0.00059985	-0.33075	-0.0001759	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.7932	1	8434	8434		26.796	0.10319	1	1159800			32367	6825	21374	21384	36898	36898					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.817138671875	2	531.817021	1061.61949	0.49482	0.00026316	-0.7967	-0.0004237	-0.30187	-0.00016054	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.7932	1	10168	10168		26.796	0.10319	1	1227700			32368	6825	21374	21384	36899	36899					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.817138671875	2	531.817021	1061.61949	1.0704	0.00056928	-1.2309	-0.00065462	-0.16046	-8.5335E-05	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.7932	1	10466	10466		25.45	0	1	4490200			32369	6825	21374	21384	36900	36900					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.81689453125	2	531.817021	1061.61949	-0.69524	-0.00036974	0.41238	0.00021931	-0.28285	-0.00015043	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.7932	1	10171	10171		26.796	0.10319	1	1296000			32370	6825	21374	21384	36901	36901					0.09114502930242452
LLVITYPLM	9	Unmodified	_LLVITYPLM_					0	0	0		nc|ENSG00000173085|Q96H96-3|COQ2;ENSG00000173085|ENST00000647002|COQ2;nc|ENSG00000173085|Q96H96-6|COQ2;nc|ENSG00000173085|Q96H96-5|COQ2;nc|ENSG00000173085|Q96H96-4|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	nc|ENSG00000173085|Q96H96-3|COQ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8167114257812	2	531.817021	1061.61949	-1.264	-0.00067223	1.0817	0.00057524	-0.18237	-9.6987E-05	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.67235	1	10367	10367		42.474	13.325	1	4586300			32371	6825	21374	21384	36902	36902					0.09114502930242452
LLVKGIVPRD	10	Unmodified	_LLVKGIVPRD_					0	0	0		ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.3529052734375	2	555.355691	1108.69683	-0.45068	-0.00025029	-3.7051	-0.0020576	-4.1558	-0.0023079	555.3535032243398	101.3	2.2254	101.3	100.77	103	0					164	54	4	0	0	0	0.85694	1	10265	10265		21.96	1.9631	1	2945100			32372	3851	21375	21385	36903	36903					0.14682857190791765
LLVKGIVPRD	10	Unmodified	_LLVKGIVPRD_					0	0	0		ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.35302734375	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.8651	1	10561	10561		25.574	2.0514	1	5963400			32373	3851	21375	21385	36904	36904					0.14682857190791765
LLVKLGLG	8	Unmodified	_LLVKLGLG_					0	0	0			REV__ENST00000319212.8_1_15:66624336-66625102:+|nuORF	REV__ENST00000319212.8_1_15:66624336-66625102:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852783203125	2	406.783839	811.553125	-0.045049	-1.8325E-05	3.807	0.0015486	3.7619	0.0015303	406.78524079935227	33.287	0.97472	33.291	32.894	33.869	0.0030785					79	22	4	0	0	0	0.87276	1	1967	1967		29.842	0	1	346170	+		32374	24983	21376	21386	36905	36905					0.1398105515052066
LLVKLGLG	8	Unmodified	_LLVKLGLG_					0	0	0			REV__ENST00000319212.8_1_15:66624336-66625102:+|nuORF	REV__ENST00000319212.8_1_15:66624336-66625102:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7851867675781	2	406.783839	811.553125	0.72345	0.00029429	2.8619	0.0011642	3.5854	0.0014585	406.7848598488789	32.675	0.80478	32.887	32.55	33.355	0.21168					52	18	3	0	0	0	0.82464	1	2363	2363		21.702	1.2205	1	1157900	+		32375	24983	21376	21386	36906	36906					0.1398105515052066
LLVKLGLG	8	Unmodified	_LLVKLGLG_					0	0	0			REV__ENST00000319212.8_1_15:66624336-66625102:+|nuORF	REV__ENST00000319212.8_1_15:66624336-66625102:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.783839	811.553125	-1.979	-0.00080504	5.7069	0.0023215	3.7279	0.0015164	406.7860220318898	33.292	1.0092	33.292	32.946	33.956	0	0.09986	0.0014552	NaN	29.842	85	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	492770	+		32376	24983	21376	21386							0.1398105515052066
LLVKLGLG	8	Unmodified	_LLVKLGLG_					0	0	0			REV__ENST00000319212.8_1_15:66624336-66625102:+|nuORF	REV__ENST00000319212.8_1_15:66624336-66625102:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.783839	811.553125	-1.9152	-0.00077909	5.6524	0.0022993	3.7372	0.0015202	406.78599321538513	33.235	0.97446	33.287	32.96	33.935	0.05246	0.094922	0.0014109	NaN	29.842	108	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	479720	+		32377	24983	21376	21386							0.1398105515052066
LLVKLYRF	8	Unmodified	_LLVKLYRF_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.361083984375	2	526.33677	1050.65899	0.077037	4.0548E-05	3.7637	0.001981	3.8407	0.0020215	526.3387803480888	33.548	0.40117	33.491	33.25	33.651	-0.056385					12	8	2	0	0	0	0.4196	1	2065	2065		29.842	9.3597	1	65674			32378	1089	21377	21387	36907	36907					0.1356839099598801
LLVKQNKTY	9	Unmodified	_LLVKQNKTY_					0	0	0		ENST00000473684.5_3_3:119149608-119149695:-|nuORF	ENST00000473684.5_3_3:119149608-119149695:-|nuORF	ENST00000473684.5_3_3:119149608-119149695:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8311157226562	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.74721	2	9370	9370;9441		37.159	11.709	1	5219600			32379	12290	21378	21388	36908;36909	36908					0.10094577919812764
LLVKQNKTY	9	Unmodified	_LLVKQNKTY_					0	0	0		ENST00000473684.5_3_3:119149608-119149695:-|nuORF	ENST00000473684.5_3_3:119149608-119149695:-|nuORF	ENST00000473684.5_3_3:119149608-119149695:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8303833007812	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.51307	1	8825	8825		51.335	14.889	1	1728300			32380	12290	21378	21388	36910	36910					0.10094577919812764
LLVKRIPG	8	Unmodified	_LLVKRIPG_					0	0	0			REV__nc|ENSG00000047932|Q9HD26-3|GOPC	REV__nc|ENSG00000047932|Q9HD26-3|GOPC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3088684082031	2	448.308013	894.601472	-0.0017418	-7.8087E-07	0.15802	7.0841E-05	0.15628	7.0061E-05	448.3079324044305	78	0.90268	78.564	78.134	79.037	0.56332					32	21	3	0	0	0	0.80706	1	8936	8936		19.36	1.0356	1	299620	+		32381	16360	21379	21389	36911	36911					0.1499554879040943
LLVKTQCLT	9	Unmodified	_LLVKTQCLT_					0	0	0			REV__ENSG00000005156|ENST00000378526|LIG3	REV__ENSG00000005156|ENST00000378526|LIG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8035888671875	2	509.801903	1017.58925	0.9788	0.00049899	2.5641	0.0013072	3.5429	0.0018062	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.62081	1	8676	8676		45.952	1.8352	1	979740	+		32382	16076	21380	21390	36912	36912					0.08116144265045477
LLVKYIFTL	9	Unmodified	_LLVKYIFTL_					0	0	0		ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF	ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3532104492188	2	555.352086	1108.68962	0.32258	0.00017915	1.7033	0.00094593	2.0259	0.0011251	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.7932	1	10544	10544		18.324	0.95945	1	7708500			32383	5124	21381	21391	36913	36913					0.13962124590375424
LLVKYIFTL	9	Unmodified	_LLVKYIFTL_					0	0	0		ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF	ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3533325195312	2	555.352086	1108.68962	0.85674	0.00047579	1.2548	0.00069686	2.1115	0.0011727	555.3526695275054	100.86	2.5278	101	100.46	102.99	0.14352					194	61	5	0	0	0	0.78536	1	10655	10655		29.15	1.2673	1	5097700			32384	5124	21381	21391	36914	36914					0.13962124590375424
LLVLAAAAAAA	11	Unmodified	_LLVLAAAAAAA_					0	0	0		nc|ENSG00000106799|P36897-3|TGFBR1;ENSG00000106799|ENST00000374994|TGFBR1;nc|ENSG00000106799|P36897-2|TGFBR1	nc|ENSG00000106799|P36897-3|TGFBR1	nc|ENSG00000106799|P36897-3|TGFBR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.8028869628906	2	477.80276	953.590967	0.80048	0.00038247	-0.89821	-0.00042917	-0.097733	-4.6697E-05	477.8021374235212	50.741	0.906	51.188	50.682	51.588	0.4476					52	21	3	0	0	0	0.74035	1	5037	5037		24.203	0	1	957760			32385	14834	21382	21392	36915	36915					0.11231521345303008
LLVLATVLCN	10	Unmodified	_LLVLATVLCN_					0	0	0		ENSG00000168229|ENST00000306051|PTGDR;nc|ENSG00000168229|Q13258-2|PTGDR	ENSG00000168229|ENST00000306051|PTGDR	ENSG00000168229|ENST00000306051|PTGDR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.8208618164062	2	529.817553	1057.62055	3.7419	0.0019825	2.4361	0.0012907	6.178	0.0032732	529.818622535591	104.69	1.1649	104.92	104.12	105.28	0.22681					44	27	3	0	0	0	0.86589	1	12777	12777		29.15	3.6994	1	298560			32386	6383	21383	21393	36916	36916					0.0940471729913952
LLVLEGIPLL	10	Unmodified	_LLVLEGIPLL_					0	0	0		ENSG00000174358|ENST00000304460|SLC6A19	ENSG00000174358|ENST00000304460|SLC6A19	ENSG00000174358|ENST00000304460|SLC6A19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.3587036132812	2	540.357368	1078.70018	-0.068166	-3.6834E-05	2.3888	0.0012908	2.3206	0.001254	540.3584971364328	36.917	1.6881	36.864	36.337	38.025	-0.053558					103	37	4	0	0	0	0.85694	1	2484	2484		21.96	5.4867	1	646150			32387	6927	21384	21394	36917	36917					0.16398107244822313
LLVLFITLM	9	Unmodified	_LLVLFITLM_					0	0	0			REV__ENST00000496331.1_1_20:4854564-4866632:-|nuORF	REV__ENST00000496331.1_1_20:4854564-4866632:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8168334960938	2	531.835214	1061.65588	-1.5114	-0.0008038	-1.6943	-0.00090108	-3.2057	-0.0017049	531.8335549248235	88.225	0.2467	88.395	88.169	88.415	0.16923					6	5	2	0	0	0	0.20789	1	8687	8687		19.36	0	1	24724	+		32388	16958	21385	21395	36918	36918					0.12751379826931952
LLVLFLLLPIL	11	Unmodified	_LLVLFLLLPIL_					0	0	0		ENSG00000162733|ENST00000367921|DDR2	ENSG00000162733|ENST00000367921|DDR2	ENSG00000162733|ENST00000367921|DDR2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3794555664062	2	633.943611	1265.87267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.267	1	58.377	57.877	58.877	0.11027								0	0	0	0.56276	1	4962	4962		24.203	6.8378	1				32389	5726	21386	21396	36919	36919					0.2503667865216812
LLVLFPLP	8	Unmodified	_LLVLFPLP_					0	0	0			REV__ENST00000453514.5_1_5:78908374-78908419:+|nuORF	REV__ENST00000453514.5_1_5:78908374-78908419:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7920837402344	2	456.301865	910.589176	-0.74153	-0.00033836	-1.2175	-0.00055555	-1.959	-0.00089391	456.30122677760585	49.487	1.9734	49.463	48.706	50.68	-0.024033					70	44	2	0	0	0	0.4196	1	4298	4298		33.493	0	1	128270	+		32390	26914	21387	21397	36920	36920					0.1303051232736152
LLVLGMVW	8	Unmodified	_LLVLGMVW_					0	0	0		ENST00000550867.5_1_12:49494935-49504419:-|nuORF;ENST00000552141.5_1_12:49495806-49497560:-|nuORF;ENST00000547670.5_1_12:49494396-49503620:-|nuORF;nc|ENSG00000139636|Q6UX01-5|LMBR1L;nc|ENSG00000139636|Q6UX01-3|LMBR1L;nc|ENSG00000139636|Q6UX01-4|LMBR1L;nc|ENSG00000139636|Q6UX01-2|LMBR1L;ENSG00000139636|ENST00000267102|LMBR1L	ENST00000550867.5_1_12:49494935-49504419:-|nuORF	ENST00000550867.5_1_12:49494935-49504419:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77764892578125	2	465.777699	929.540846	-1.0371	-0.00048307	0.66012	0.00030747	-0.37701	-0.0001756	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.84567	1	8022	8022		24.504	1.4615	1	1384500			32391	13663	21388	21398	36921	36921					0.07325695415818245
LLVLGRRCRR	10	Unmodified	_LLVLGRRCRR_					0	0	0		ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.392822265625	2	621.390408	1240.76626	-0.078753	-4.8936E-05	3.8269	0.002378	3.7482	0.0023291	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.86589	1	10881	10881		29.15	1.2673	1	10411000			32392	10074	21389	21399	36922	36922					0.15551037658542555
LLVLGRRCRR	10	Unmodified	_LLVLGRRCRR_					0	0	0		ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3932495117188	2	621.390408	1240.76626	-0.28789	-0.0001789	3.9741	0.0024694	3.6862	0.0022905	621.392781910036	104.72	2.6015	104.71	104.23	106.84	-0.014809					230	61	5	0	0	0	0.85694	2	11437	11411;11437		29.15	3.5755	1	11881000			32393	10074	21389	21399	36923;36924	36924					0.15551037658542555
LLVLGRRCRR	10	Unmodified	_LLVLGRRCRR_					0	0	0		ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3928833007812	2	621.390408	1240.76626	2.9766	0.0018496	0.7245	0.00045019	3.7011	0.0022998	621.3907359645153	104.71	2.7313	104.66	104.1	106.83	-0.04039					247	64	5	0	0	0	0.86589	2	11481	11481;11493		29.15	1.2673	1	12926000			32394	10074	21389	21399	36925;36926	36925					0.15551037658542555
LLVLGRRCRR	10	Unmodified	_LLVLGRRCRR_					0	0	0		ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3926391601562	2	621.390408	1240.76626	1.3	0.00080781	2.4185	0.0015028	3.7185	0.0023106	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.86452	1	11031	11031		30.504	4.9296	1	23079000			32395	10074	21389	21399	36927	36927					0.15551037658542555
LLVLGRRCRR	10	Unmodified	_LLVLGRRCRR_					0	0	0		ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.392822265625	2	621.390408	1240.76626	0.9213	0.00057249	2.6291	0.0016337	3.5504	0.0022062	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.86589	2	11057	11057;11153		29.15	2.4566	1	22352000			32396	10074	21389	21399	36928;36929	36928					0.15551037658542555
LLVLGRRCRR	10	Unmodified	_LLVLGRRCRR_					0	0	0		ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3937377929688	2	621.390408	1240.76626	0.92125	0.00057246	3.7224	0.002313	4.6436	0.0028855	621.3925512557826	106.19	2.0795	106.29	105.91	107.99	0.099007					149	50	5	0	0	0	0.85694	1	11364	11364		21.96	1.013	1	2148500			32397	10074	21389	21399	36930	36930					0.15551037658542555
LLVLGRRCRR	10	Unmodified	_LLVLGRRCRR_					0	0	0		ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	ENST00000325954.8_2_12:120972156-120972429:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.3921508789062	2	621.390408	1240.76626	2.1086	0.0013103	2.0241	0.0012577	4.1327	0.002568	621.3915992412323	104.3	2.0291	104.48	104.04	106.07	0.18888					138	51	4	0	0	0	0.86589	1	12682	12682		29.15	4.6304	1	1168000			32398	10074	21389	21399	36931	36931					0.15551037658542555
LLVLGSLLVV	10	Unmodified	_LLVLGSLLVV_					0	0	0			REV__ENSG00000179178|ENST00000439858|TMEM125	REV__ENSG00000179178|ENST00000439858|TMEM125	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.349853515625	2	513.352086	1024.68962	-0.61225	-0.0003143	-2.2865	-0.0011738	-2.8987	-0.0014881	513.3506979356338	55.946	1.1013	55.977	55.076	56.177	0.030838					35	27	2	0	0	0	0.85939	1	5048	5048		23.042	4.7181	1	66711	+		32399	22324	21390	21400	36932	36932					0.17826124590374093
LLVLHLSLASA	11	Unmodified	_LLVLHLSLASA_					0	0	0		ENSG00000155897|ENST00000286355|ADCY8	ENSG00000155897|ENST00000286355|ADCY8	ENSG00000155897|ENST00000286355|ADCY8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8546752929688	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.6921	2	11200	11188;11200		32.812	3.6424	1	50786000			32400	5349	21391	21401	36933;36934	36934					0.1340743747093711
LLVLHNQLSFV	11	Unmodified	_LLVLHNQLSFV_					0	0	0		nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;ENST00000484268.1_1_7:48352666-48443694:+|nuORF	nc|ENSG00000179869|Q86UQ4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8829956054688	2	641.87953	1281.74451	1.5974	0.0010254	2.9074	0.0018662	4.5048	0.0028915	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.7434	1	10285	10285		23.523	1.5628	1	4266200			32401	7298	21392	21402	36935	36935					0.11490511390957181
LLVLIGPDA	9	Unmodified	_LLVLIGPDA_					0	0	0			REV__nc|ENSG00000125648|Q9BV35-4|SLC25A23	REV__nc|ENSG00000125648|Q9BV35-4|SLC25A23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	455.7846374511719	2	455.784036	909.553519	-1.8164	-0.00082788	3.166	0.001443	1.3496	0.00061515	455.785318563311	43.535	2.2148	43.535	42.918	45.133	0					85	53	2	0	0	0	0.76996	1	3112	3112		33.516	1.5607	1	247130	+		32402	18654	21393	21403	36936	36936					0.09512430079701062
LLVLKVLWN	9	Unmodified	_LLVLKVLWN_					0	0	0		ENSG00000117479|ENST00000236137|SLC19A2;nc|ENSG00000117479|O60779-2|SLC19A2	ENSG00000117479|ENST00000236137|SLC19A2	ENSG00000117479|ENST00000236137|SLC19A2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3580932617188	2	549.357702	1096.70085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.551	1	44.56	44.06	45.06	0.0084534								0	0	0	0.31828	1	3149	3149		24.203	1.1603	1				32403	2981	21394	21404	36937	36937					0.15636946684526265
LLVLLLHLS	9	Unmodified	_LLVLLLHLS_					0	0	0		ENST00000452853.6_1_3:149683261-149683384:-|nuORF	ENST00000452853.6_1_3:149683261-149683384:-|nuORF	ENST00000452853.6_1_3:149683261-149683384:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.841552734375	2	510.844428	1019.6743	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.925	1	78.017	77.517	78.517	0.091438								0	0	0	0.31472	1	7294	7294		25.45	1.2474	1				32404	11929	21395	21405	36938	36938					0.1652525779318239
LLVLLLLGPT	10	Unmodified	_LLVLLLLGPT_					0	0	0		ENST00000440656.1_1_3:33110441-33138613:-|nuORF;ENST00000485698.5_1_3:33095017-33138613:-|nuORF;nc|ENSG00000170266|P16278-2|GLB1;nc|ENSG00000170266|P16278|GLB1;ENSG00000170266|ENST00000307363|GLB1	ENST00000440656.1_1_3:33110441-33138613:-|nuORF	ENST00000440656.1_1_3:33110441-33138613:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3610229492188	2	526.359911	1050.70527	-1.5923	-0.00083811	3.7176	0.0019568	2.1254	0.0011187	526.3617428180578	33.41	1.543	33.41	33.111	34.654	0					182	44	5	0	0	0	0.84874	1	1845	1845		18.324	0	1	7280900			32405	6572	21396	21406	36939	36939					0.18194411107424457
LLVLLLLGPT	10	Unmodified	_LLVLLLLGPT_					0	0	0		ENST00000440656.1_1_3:33110441-33138613:-|nuORF;ENST00000485698.5_1_3:33095017-33138613:-|nuORF;nc|ENSG00000170266|P16278-2|GLB1;nc|ENSG00000170266|P16278|GLB1;ENSG00000170266|ENST00000307363|GLB1	ENST00000440656.1_1_3:33110441-33138613:-|nuORF	ENST00000440656.1_1_3:33110441-33138613:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3607177734375	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.8488	1	2435	2435		17.365	0	1	2871800			32406	6572	21396	21406	36940	36940					0.18194411107424457
LLVLLLLGPT	10	Unmodified	_LLVLLLLGPT_					0	0	0		ENST00000440656.1_1_3:33110441-33138613:-|nuORF;ENST00000485698.5_1_3:33095017-33138613:-|nuORF;nc|ENSG00000170266|P16278-2|GLB1;nc|ENSG00000170266|P16278|GLB1;ENSG00000170266|ENST00000307363|GLB1	ENST00000440656.1_1_3:33110441-33138613:-|nuORF	ENST00000440656.1_1_3:33110441-33138613:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3611450195312	2	526.359911	1050.70527	-0.23001	-0.00012107	2.5809	0.0013585	2.3509	0.0012374	526.3611422284945	33.372	1.4852	33.418	33.076	34.561	0.045849					221	65	5	0	0	0	0.8488	1	1672	1672		17.365	5.1581	1	5657100			32407	6572	21396	21406	36941	36941					0.18194411107424457
LLVLLLLGVVL	11	Unmodified	_LLVLLLLGVVL_					0	0	0		ENSG00000168955|ENST00000304568|TM4SF20	ENSG00000168955|ENST00000304568|TM4SF20	ENSG00000168955|ENST00000304568|TM4SF20	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.8645629882812	2	582.920135	1163.82572	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.95	1	113.95	113.45	114.45	0.0011978								0	0	0	0.56276	1	13752	13752		6.7355	3.5763	1				32408	6455	21397	21407	36942	36942					0.2503581910104913
LLVLLTFK	8	Unmodified	_LLVLLTFK_					0	0	0		ENST00000460072.5_1_2:39984490-39995716:-|nuORF	ENST00000460072.5_1_2:39984490-39995716:-|nuORF	ENST00000460072.5_1_2:39984490-39995716:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.8193664550781	2	473.820421	945.62629	0.090543	4.2901E-05	2.7417	0.0012991	2.8323	0.001342	473.82167197644884	37.75	0.81836	37.692	37.116	37.934	-0.057915					45	26	2	0	0	0	0.84191	1	2155	2155		11.511	2.6887	1	89536			32409	12002	21398	21408	36943	36943					0.1513018387312286
LLVLMPLAL	9	Unmodified	_LLVLMPLAL_					0	0	0			REV__ENSG00000131068|ENST00000253381|DEFB118	REV__ENSG00000131068|ENST00000253381|DEFB118	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.3032531738281	2	491.822107	981.629661	0.46427	0.00022834	-1.179	-0.00057986	-0.71474	-0.00035153	491.82166816296893	64.113	0.31255	64.237	64.125	64.438	0.12396					13	12	2	0	0	0	0.7932	1	5638	5638		21.702	0	1	59950	+		32410	18935	21399	21409	36944	36944					0.13811110655467473
LLVLPALVD	9	Unmodified	_LLVLPALVD_					0	0	0			REV__ENSG00000182871|ENST00000651438|COL18A1	REV__ENSG00000182871|ENST00000651438|COL18A1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.78662109375	2	476.807511	951.600469	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.497	1	24.511	24.011	25.011	0.013996								0	0	0	0.35327	1	836	836		13.775	4.953	1		+		32411	22557	21400	21410	36945	36945					0.12273289630832096
LLVLPRLWSR	10	Unmodified	_LLVLPRLWSR_					0	0	0		ENST00000433910.1_1_1:189101497-189101806:-|nuORF	ENST00000433910.1_1_1:189101497-189101806:-|nuORF	ENST00000433910.1_1_1:189101497-189101806:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3824462890625	2	626.898057	1251.78156	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.27	1	118.36	117.86	118.86	0.087753								0	0	0	0.45132	1	12482	12482		25.574	10.709	1				32412	11690	21401	21411	36946	36946					0.165742277273921
LLVLPVQSPAN	11	Unmodified	_LLVLPVQSPAN_					0	0	0			REV__ENSG00000104613|ENST00000397977|INTS10	REV__ENSG00000104613|ENST00000397977|INTS10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8430786132812	2	575.845156	1149.67576	-0.46596	-0.00026832	-3.1419	-0.0018092	-3.6078	-0.0020776	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.69995	1	9110	9110		31.53	1.2121	1	3411000	+		32413	17464	21402	21412	36947	36947					0.10690847091291289
LLVLPVQSPAN	11	Unmodified	_LLVLPVQSPAN_					0	0	0			REV__ENSG00000104613|ENST00000397977|INTS10	REV__ENSG00000104613|ENST00000397977|INTS10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8428344726562	2	575.845156	1149.67576	-0.99734	-0.00057431	-2.9254	-0.0016846	-3.9227	-0.0022589	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.67778	4	9490	9490;9502;9514;9634		35.152	7.2698	1	5638300	+		32414	17464	21402	21412	36948;36949;36950;36951	36948					0.10690847091291289
LLVLPVQSPAN	11	Unmodified	_LLVLPVQSPAN_					0	0	0			REV__ENSG00000104613|ENST00000397977|INTS10	REV__ENSG00000104613|ENST00000397977|INTS10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8428344726562	2	575.845156	1149.67576	-1.368	-0.00078773	-2.557	-0.0014725	-3.925	-0.0022602	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.73893	1	9180	9180		24.519	0.99649	1	6121300	+		32415	17464	21402	21412	36952	36952					0.10690847091291289
LLVLQNRPL	9	Unmodified	_LLVLQNRPL_					0	0	0		ENSG00000221813|ENST00000641698|OR6B1	ENSG00000221813|ENST00000641698|OR6B1	ENSG00000221813|ENST00000641698|OR6B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.339599609375	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.77546	1	10141	10141		31.955	8.9124	1	1199500			32416	8666	21403	21413	36953	36953					0.1408658801931324
LLVLRSKGDEM	11	Unmodified	_LLVLRSKGDEM_					0	0	0			REV__nc|ENSG00000013288|Q9Y2E5-2|MAN2B2	REV__nc|ENSG00000013288|Q9Y2E5-2|MAN2B2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.8497924804688	2	630.852655	1259.69076	-0.1784	-0.00011254	-4.4452	-0.0028043	-4.6236	-0.0029168	630.8497127634344	110.75	1.3676	110.7	110.4	111.77	-0.057182					112	42	4	0	0	0	0.70737	1	12060	12060		30.318	3.6248	1	825620	+		32417	29675	21404	21414	36954	36954					0.0712997089694909
LLVLSGGTL	9	Unmodified	_LLVLSGGTL_					0	0	0			REV__nc|ENSG00000103723|Q13367-3|AP3B2	REV__nc|ENSG00000103723|Q13367-3|AP3B2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.77508544921875	2	436.776211	871.537869	-0.99178	-0.00043318	-2.1014	-0.00091785	-3.0932	-0.001351	436.7752083239027	90.559	2.3196	91.029	90.562	92.882	0.47068					153	55	5	0	0	0	0.78058	1	10866	10866		30.504	1.3541	1	11924000	+		32418	17428	21405	21415	36955	36955					0.09696143562666748
LLVLSVNSSVF	11	Unmodified	_LLVLSVNSSVF_					0	0	0		ENSG00000106991|ENST00000373203|ENG;nc|ENSG00000106991|P17813-2|ENG;ENST00000462196.1_1_9:130588871-130592043:-|nuORF	ENSG00000106991|ENST00000373203|ENG	ENSG00000106991|ENST00000373203|ENG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3431396484375	2	589.344989	1176.67542	-0.6745	-0.00039751	-2.9294	-0.0017264	-3.6039	-0.002124	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.72918	1	10013	10013		26.693	1.1189	1	16185000			32419	2326	21406	21416	36956	36956					0.09415427371413898
LLVLSVNSSVF	11	Unmodified	_LLVLSVNSSVF_					0	0	0		ENSG00000106991|ENST00000373203|ENG;nc|ENSG00000106991|P17813-2|ENG;ENST00000462196.1_1_9:130588871-130592043:-|nuORF	ENSG00000106991|ENST00000373203|ENG	ENSG00000106991|ENST00000373203|ENG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3423461914062	2	589.344989	1176.67542	-0.65315	-0.00038493	-3.1619	-0.0018634	-3.815	-0.0022484	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.68532	1	9696	9696		33.922	1.1092	1	5584100			32420	2326	21406	21416	36957	36957					0.09415427371413898
LLVLSVNSSVF	11	Unmodified	_LLVLSVNSSVF_					0	0	0		ENSG00000106991|ENST00000373203|ENG;nc|ENSG00000106991|P17813-2|ENG;ENST00000462196.1_1_9:130588871-130592043:-|nuORF	ENSG00000106991|ENST00000373203|ENG	ENSG00000106991|ENST00000373203|ENG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.343017578125	2	589.344989	1176.67542	0.82336	0.00048524	-4.2828	-0.002524	-3.4594	-0.0020388	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.66929	1	11359	11359		36.447	2.5251	1	9460500			32421	2326	21406	21416	36958	36958					0.09415427371413898
LLVLVELVVV	10	Unmodified	_LLVLVELVVV_					0	0	0		ENST00000565181.1_1_15:72766821-72767304:-|nuORF	ENST00000565181.1_1_15:72766821-72767304:-|nuORF	ENST00000565181.1_1_15:72766821-72767304:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3739624023438	2	548.373018	1094.73148	-0.47019	-0.00025784	2.7651	0.0015163	2.2949	0.0012584	548.3743331690392	35.442	1.0652	35.43	35	36.065	-0.012203					66	23	4	0	0	0	0.88106	1	2261	2261		12.207	0	1	555000			32422	13907	21407	21417	36959	36959					0.18790680278880245
LLVLVELVVV	10	Unmodified	_LLVLVELVVV_					0	0	0		ENST00000565181.1_1_15:72766821-72767304:-|nuORF	ENST00000565181.1_1_15:72766821-72767304:-|nuORF	ENST00000565181.1_1_15:72766821-72767304:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3734130859375	2	548.373018	1094.73148	-0.49859	-0.00027341	2.6391	0.0014472	2.1405	0.0011738	548.3742417671841	35.313	1.4945	35.32	34.937	36.431	0.0063896					91	33	3	0	0	0	0.85108	3	2287	2193;2240;2287		25.45	6.4008	1	324130			32423	13907	21407	21417	36960;36961;36962	36962					0.18790680278880245
LLVLVTPEE	9	Unmodified	_LLVLVTPEE_					0	0	0			REV__ENST00000510007.5_1_17:48453495-48456929:+|nuORF	REV__ENST00000510007.5_1_17:48453495-48456929:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8011169433594	2	506.799883	1011.58521	-0.4991	-0.00025294	2.6404	0.0013382	2.1413	0.0010852	506.8011482581911	44.494	2.6105	44.503	42.78	45.391	0.0084534					109	64	3	0	0	0	0.7932	1	3137	3137		25.45	2.4077	1	373670	+		32424	20408	21408	21418	36963	36963					0.07988378043000921
LLVLVVQE	8	Unmodified	_LLVLVVQE_					0	0	0			REV__ENST00000488058.1_1_9:36390564-36487337:-|nuORF	REV__ENST00000488058.1_1_9:36390564-36487337:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7906188964844	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.81548	1	3034	3034		20.482	0	1	605230	+		32425	27589	21409	21419	36964	36964					0.10984716596749422
LLVLYSLSIL	10	Unmodified	_LLVLYSLSIL_					0	0	0			REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3631591796875	2	567.36265	1132.71075	-1.2185	-0.00069132	2.7113	0.0015383	1.4929	0.000847	567.3640514854945	44.308	2.4797	44.308	43.541	46.02	0					178	60	4	0	0	0	0.86201	6	3156	3156;3227;3238;3248;3271;3279		29.15	4.9468	1	1364200	+		32426	28290	21410	21420	36965;36966;36967;36968;36969;36970	36965					0.14970089899247796
LLVLYSLSIL	10	Unmodified	_LLVLYSLSIL_					0	0	0			REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.36376953125	2	567.36265	1132.71075	-0.8743	-0.00049604	2.4089	0.0013667	1.5346	0.00087069	567.3638800486743	44.538	2.1986	44.515	43.895	46.093	-0.023079					155	51	5	0	0	0	0.86452	1	3565	3565		30.504	1.3541	1	2273000	+		32427	28290	21410	21420	36971	36971					0.14970089899247796
LLVLYSLSIL	10	Unmodified	_LLVLYSLSIL_					0	0	0			REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.36328125	2	567.36265	1132.71075	0.20972	0.00011899	1.3081	0.00074215	1.5178	0.00086113	567.3632440181018	44.63	2.2677	44.626	43.93	46.198	-0.0041618					153	53	5	0	0	0	0.84112	1	3553	3553		37.159	0	1	2377000	+		32428	28290	21410	21420	36972	36972					0.14970089899247796
LLVLYSLSIL	10	Unmodified	_LLVLYSLSIL_					0	0	0			REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3632202148438	2	567.36265	1132.71075	0.39672	0.00022508	1.2522	0.00071043	1.6489	0.00093552	567.363221347754	44.24	2.8558	44.249	42.808	45.664	0.0084534					165	70	4	0	0	0	0.81018	4	3054	3054;3077;3122;3145		38.806	5.2619	1	1167000	+		32429	28290	21410	21420	36973;36974;36975;36976	36973					0.14970089899247796
LLVLYSLSIL	10	Unmodified	_LLVLYSLSIL_					0	0	0			REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.36328125	2	567.36265	1132.71075	0.36025	0.00020439	1.3571	0.00076996	1.7173	0.00097435	567.3632714206227	44.36	2.296	44.409	43.67	45.966	0.048996					151	56	4	0	0	0	0.6398	2	3157	3134;3157		47.916	1.2474	1	1558100	+		32430	28290	21410	21420	36977;36978	36978					0.14970089899247796
LLVLYSLSIL	10	Unmodified	_LLVLYSLSIL_					0	0	0			REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3648681640625	2	567.36265	1132.71075	0.15466	8.7749E-05	1.5374	0.00087224	1.692	0.00095999	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.86452	1	3056	3056		30.504	0	1	1937600	+		32431	28290	21410	21420	36979	36979					0.14970089899247796
LLVLYSLSIL	10	Unmodified	_LLVLYSLSIL_					0	0	0			REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.36279296875	2	567.36265	1132.71075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.477	1	63.507	63.007	64.007	0.030243								0	0	0	0.45132	1	5558	5558		23.042	5.6775	1		+		32432	28290	21410	21420	36980	36980					0.14970089899247796
LLVMGAKIAS	10	Oxidation (M)	_LLVM(Oxidation (M))GAKIAS_		LLVM(1)GAKIAS		LLVM(44)GAKIAS	0	0	1		nc|ENSG00000012817|Q9BY66-2|KDM5D;ENSG00000012817|ENST00000317961|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D;ENST00000469599.6_1_Y:21868632-21871788:-|nuORF;ENST00000492117.1_1_Y:21868632-21877911:-|nuORF	nc|ENSG00000012817|Q9BY66-2|KDM5D	nc|ENSG00000012817|Q9BY66-2|KDM5D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8035583496094	2	509.801903	1017.58925	0.075306	3.8391E-05	3.4995	0.001784	3.5748	0.0018224	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.71042	1	8520	8520		44.117	11.304	1	958280			32433	804	21411	21421	36981	36981		13			0.08116144265068215
LLVMGAKIAS	10	Oxidation (M)	_LLVM(Oxidation (M))GAKIAS_		LLVM(1)GAKIAS		LLVM(46)GAKIAS	0	0	1		nc|ENSG00000012817|Q9BY66-2|KDM5D;ENSG00000012817|ENST00000317961|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D;ENST00000469599.6_1_Y:21868632-21871788:-|nuORF;ENST00000492117.1_1_Y:21868632-21877911:-|nuORF	nc|ENSG00000012817|Q9BY66-2|KDM5D	nc|ENSG00000012817|Q9BY66-2|KDM5D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8037109375	2	509.801903	1017.58925	-0.37726	-0.00019233	3.8775	0.0019768	3.5002	0.0017844	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.67608	2	8542	8494;8542		45.952	7.9657	1	3415500			32434	804	21411	21421	36982;36983	36983		13			0.08116144265068215
LLVMGKGEK	9	Unmodified	_LLVMGKGEK_					0	0	0			REV__ENSG00000018236|ENST00000551295|CNTN1	REV__ENSG00000018236|ENST00000551295|CNTN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7906494140625	2	487.788795	973.563038	0.54993	0.00026825	3.015	0.0014707	3.565	0.001739	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.77546	1	8273	8273		31.955	0	1	633420	+		32435	16222	21412	21422	36984	36984					0.07519875093601058
LLVMGPEALW	10	Unmodified	_LLVMGPEALW_					0	0	0		ENST00000371207.8_2_10:97515409-97515493:+|nuORF	ENST00000371207.8_2_10:97515409-97515493:+|nuORF	ENST00000371207.8_2_10:97515409-97515493:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	564.8107299804688	2	564.809728	1127.6049	-1.2607	-0.00071205	2.7001	0.0015251	1.4394	0.000813	564.8111502403638	109.93	1.6377	109.87	109.63	111.26	-0.055077					173	65	5	0	0	0	0.86589	1	11971	11971		29.15	1.0681	1	6827300			32436	10661	21413	21423	36985	36985					0.046204307820971735
LLVMQLLN	8	Unmodified	_LLVMQLLN_					0	0	0		ENST00000535150.1_1_6:131486241-131520610:+|nuORF;ENST00000543815.5_1_6:131486241-131540820:+|nuORF;ENSG00000118507|ENST00000431975|AKAP7	ENST00000535150.1_1_6:131486241-131520610:+|nuORF	ENST00000535150.1_1_6:131486241-131520610:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2873840332031	2	472.285889	942.557224	-0.026744	-1.2631E-05	3.8174	0.0018029	3.7907	0.0017903	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.89962	1	10283	10283		38.806	5.9937	1	48574000			32437	3033	21414	21424	36986	36986					0.08364776581925071
LLVMVMLVG	9	Unmodified	_LLVMVMLVG_					0	0	0			REV__ENSG00000184574|ENST00000329858|LPAR5	REV__ENSG00000184574|ENST00000329858|LPAR5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7904968261719	2	487.792492	973.570431	-0.48923	-0.00023864	-3.3016	-0.0016105	-3.7908	-0.0018491	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.72098	1	9915	9915		39.021	1.8624	1	1599600	+		32438	22693	21415	21425	36987	36987					0.08258891369666799
LLVMYVVSCL	10	Unmodified	_LLVMYVVSCL_					0	0	0		ENSG00000198835|ENST00000366714|GJC2	ENSG00000198835|ENST00000366714|GJC2	ENSG00000198835|ENST00000366714|GJC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.3128662109375	2	570.313789	1138.61302	1.6172	0.00092232	-1.1379	-0.00064895	0.47933	0.00027337	570.3129382103181	36.901	0.6259	37.387	37.078	37.704	0.48581					30	14	3	0	0	0	0.85934	1	2956	2956		35.618	1.4457	1	675150			32439	8345	21416	21426	36988	36988					0.04926241707244117
LLVNKGAP	8	Unmodified	_LLVNKGAP_					0	0	0			REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF	REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2586364746094	2	406.255446	810.496338	1.5179	0.00061664	2.6476	0.0010756	4.1655	0.0016923	406.25644581486745	58.63	2.4476	58.664	57.505	59.952	0.033909					98	70	2	0	0	0	0.86791	1	5245	5245		28.254	0	1	114000	+		32440	19903	21417	21427	36989	36989					0.08351007593989834
LLVNKGAP	8	Unmodified	_LLVNKGAP_					0	0	0			REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF	REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2571105957031	2	406.255446	810.496338	0.27279	0.00011082	3.6804	0.0014952	3.9532	0.001606	406.25677816056157	49.48	2.6493	49.522	48.485	51.134	0.042236					135	72	3	0	0	0	0.81548	1	3850	3850		20.482	0	1	326490	+		32441	19903	21417	21427	36990	36990					0.08351007593989834
LLVNKGAP	8	Unmodified	_LLVNKGAP_					0	0	0			REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF	REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.25732421875	2	406.255446	810.496338	-1.4166	-0.00057551	4.2472	0.0017255	2.8306	0.0011499	406.2570241315947	44.294	2.3011	45.138	43.653	45.954	0.84438					100	56	4	0	0	0	0.81724	1	4066	4066		14.664	0.88877	1	1167500	+		32442	19903	21417	21427	36991	36991					0.08351007593989834
LLVPGPIPFL	10	Unmodified	_LLVPGPIPFL_					0	0	0			REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.339599609375	2	533.338978	1064.6634	1.7726	0.00094538	1.0666	0.00056887	2.8392	0.0015142	533.3394684575402	98.908	1.4701	99.269	98.774	100.24	0.36137					81	36	3	0	0	0	0.85108	1	11905	11905		19.36	1.995	1	1093200	+		32443	21170	21418	21428	36992	36992					0.133658554188969
LLVPIKAF	8	Unmodified	_LLVPIKAF_					0	0	0			REV__ENST00000176763.9_1_5:171471326-171471623:-|nuORF	REV__ENST00000176763.9_1_5:171471326-171471623:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.7971496582031	2	450.799489	899.584425	-0.75504	-0.00034037	-3.8886	-0.001753	-4.6436	-0.0020933	450.7976230118852	26.272	1.8593	26.015	25.383	27.243	-0.25721					83	41	4	0	0	0	0.87276	1	1483	1483		29.842	6.8048	1	2701200	+		32444	24085	21419	21429	36993	36993					0.13061628184595975
LLVPLLLQQLP	11	Unmodified	_LLVPLLLQQLP_					0	0	0			REV__ENSG00000080293|ENST00000019103|SCTR	REV__ENSG00000080293|ENST00000019103|SCTR	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	623.9222412109375	2	623.910299	1245.80605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.01	1	110.08	109.58	110.58	0.068001								0	0	0	0.56276	1	13355	13355		10.265	0.5596	1		+		32445	16799	21420	21430	36994	36994					0.19297443090272282
LLVPLPFL	8	Unmodified	_LLVPLPFL_					0	0	0			REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30108642578125	2	456.301865	910.589176	-0.84354	-0.00038491	-1.1738	-0.00053562	-2.0174	-0.00092053	456.30117331551685	46.601	1.8723	46.572	45.714	47.586	-0.028778					105	48	3	0	0	0	0.84567	1	3880	3880		24.504	2.5441	1	332630	+		32446	28714	21421	21431	36995	36995					0.1303051232736152
LLVPLPFL	8	Unmodified	_LLVPLPFL_					0	0	0			REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3016052246094	2	456.301865	910.589176	0.15231	6.9501E-05	-1.4837	-0.00067701	-1.3314	-0.00060751	456.30102814495837	33.268	1.6065	33.378	33.034	34.64	0.10991					186	70	4	0	0	0	0.84567	2	1577	1577;1609		24.504	0	1	1696300	+		32447	28714	21421	21431	36996;36997	36996					0.1303051232736152
LLVPLPFL	8	Unmodified	_LLVPLPFL_					0	0	0			REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3006286621094	2	456.301865	910.589176	-0.036271	-1.6551E-05	-1.7994	-0.00082107	-1.8357	-0.00083762	456.30089590428986	39.482	1.7239	39.429	38.71	40.434	-0.052731					108	51	3	0	0	0	0.91333	1	2446	2446		43.626	0	1	515440	+		32448	28714	21421	21431	36998	36998					0.1303051232736152
LLVPLPFL	8	Unmodified	_LLVPLPFL_					0	0	0			REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30078125	2	456.301865	910.589176	-0.28505	-0.00013007	-1.7902	-0.00081685	-2.0752	-0.00094692	456.3009409160632	46.468	1.3803	46.389	45.933	47.313	-0.079002					82	40	3	0	0	0	0.91333	1	3419	3419		43.626	11.671	1	401880	+		32449	28714	21421	21431	36999	36999					0.1303051232736152
LLVPLPFL	8	Unmodified	_LLVPLPFL_					0	0	0			REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.30145263671875	2	456.301865	910.589176	-0.032958	-1.5039E-05	-1.4652	-0.00066858	-1.4982	-0.00068361	456.3010618832383	34.27	2.0114	34.48	34.107	36.119	0.21003					105	50	4	0	0	0	0.91333	1	2535	2535		43.626	3.0534	1	1566600	+		32450	28714	21421	21431	37000	37000					0.1303051232736152
LLVPLPFL	8	Unmodified	_LLVPLPFL_					0	0	0			REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	REV__ENST00000557232.1_1_14:23025225-23025366:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3012390136719	2	456.301865	910.589176	-2.7466	-0.0012533	-0.80723	-0.00036834	-3.5538	-0.0016216	456.30134035320407	41.652	1.2821	42.066	41.223	42.505	0.4139					70	34	3	0	0	0	0.84567	1	3682	3682		24.504	0	1	3003600	+		32451	28714	21421	21431	37001	37001					0.1303051232736152
LLVPMLLI	8	Unmodified	_LLVPMLLI_					0	0	0			REV__ENSG00000152766|ENST00000371930|ANKRD22	REV__ENSG00000152766|ENST00000371930|ANKRD22	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3009033203125	2	456.30355	910.592547	-1.9609	-0.00089476	-3.2695	-0.0014919	-5.2304	-0.0023866	456.3019244318546	33.431	1.5568	33.431	33.135	34.692	0					145	44	4	0	0	0	0.80127	1	1799	1799		16.705	6.5202	1	2313000	+		32452	20314	21422	21432	37002	37002					0.13367439109742918
LLVPMLLI	8	Unmodified	_LLVPMLLI_					0	0	0			REV__ENSG00000152766|ENST00000371930|ANKRD22	REV__ENSG00000152766|ENST00000371930|ANKRD22	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7930603027344	2	456.30355	910.592547	-1.14	-0.0005202	-0.64097	-0.00029247	-1.781	-0.00081267	456.30139936111726	36.7	1.0285	36.712	36.436	37.464	0.011173					41	22	3	0	0	0	0.4196	1	2493	2493		33.493	8.989	1	81600	+		32453	20314	21422	21432	37003	37003					0.13367439109742918
LLVPPLCIRPS	11	Unmodified	_LLVPPLCIRPS_					0	0	0		ENSG00000148606|ENST00000372371|POLR3A	ENSG00000148606|ENST00000372371|POLR3A	ENSG00000148606|ENST00000372371|POLR3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2470703125	3	403.245893	1206.71585	2.718	0.001096	-0.28346	-0.00011431	2.4345	0.00098171	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.76322	1	11658	11658		17.167	0	1	15597000			32454	4972	21423	21433	37004	37004					0.12076070490161328
LLVPPPTLLF	10	Unmodified	_LLVPPPTLLF_					0	0	0		ENST00000311661.4_2_17:77020401-77042770:+|nuORF;ENST00000339142.6_2_17:77020254-77040169:+|nuORF	ENST00000311661.4_2_17:77020401-77042770:+|nuORF	ENST00000311661.4_2_17:77020401-77042770:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3536376953125	2	555.352086	1108.68962	0.32258	0.00017915	1.7033	0.00094593	2.0259	0.0011251	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.85438	1	10651	10651		16.473	2.6978	1	7708500			32455	9934	21424	21434	37005	37005					0.13962124590375424
LLVPTGKP	8	Unmodified	_LLVPTGKP_					0	0	0		nc|ENSG00000114646|O95196-3|CSPG5;ENSG00000114646|ENST00000264723|CSPG5;nc|ENSG00000114646|O95196|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7659606933594	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.495	1	40.464	39.964	40.964	-0.030991								0	0	0	0.29694	1	2889	2889		37.028	3.5129	1				32456	2782	21425	21435	37006	37006					0.09792178253815109
LLVPTGKP	8	Unmodified	_LLVPTGKP_					0	0	0		nc|ENSG00000114646|O95196-3|CSPG5;ENSG00000114646|ENST00000264723|CSPG5;nc|ENSG00000114646|O95196|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.26654052734375	2	412.765646	823.516739	1.2445	0.00051368	-1.8023	-0.00074392	-0.55779	-0.00023024	412.76609709283645	41.289	1.0546	41.296	40.74	41.795	0.0065727					35	27	2	0	0	0	0.85277	2	3072	3012;3072		31.955	1.4512	1	169780			32457	2782	21425	21435	37007;37008	37008					0.09792178253815109
LLVPTGKP	8	Unmodified	_LLVPTGKP_					0	0	0		nc|ENSG00000114646|O95196-3|CSPG5;ENSG00000114646|ENST00000264723|CSPG5;nc|ENSG00000114646|O95196|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.766845703125	2	412.765646	823.516739	1.4126	0.00058306	1.8694	0.00077163	3.282	0.0013547	412.7662658707051	42.038	1.4358	42.042	41.461	42.897	0.003418					59	34	2	0	0	0	0.91005	1	3163	3163		42.474	8.9589	1	683700			32458	2782	21425	21435	37009	37009					0.09792178253815109
LLVPTGKP	8	Unmodified	_LLVPTGKP_					0	0	0		nc|ENSG00000114646|O95196-3|CSPG5;ENSG00000114646|ENST00000264723|CSPG5;nc|ENSG00000114646|O95196|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7673034667969	2	412.765646	823.516739	-1.8992	-0.00078392	4.1525	0.001714	2.2533	0.0009301	412.76765198426614	41.794	3.0272	41.798	40.935	43.962	0.0043983					161	84	4	0	0	0	0.85277	1	2740	2740		25.45	3.7478	1	640430			32459	2782	21425	21435	37010	37010					0.09792178253815109
LLVPTGKP	8	Unmodified	_LLVPTGKP_					0	0	0		nc|ENSG00000114646|O95196-3|CSPG5;ENSG00000114646|ENST00000264723|CSPG5;nc|ENSG00000114646|O95196|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76678466796875	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.045	1	37.145	36.645	37.645	0.099277								0	0	0	0.29353	1	2094	2094		28.254	1.4582	1				32460	2782	21425	21435	37011	37011					0.09792178253815109
LLVPTGKP	8	Unmodified	_LLVPTGKP_					0	0	0		nc|ENSG00000114646|O95196-3|CSPG5;ENSG00000114646|ENST00000264723|CSPG5;nc|ENSG00000114646|O95196|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76715087890625	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.211	1	37.31	36.81	37.81	0.099277								0	0	0	0.29452	1	2117	2117		33.516	1.5607	1				32461	2782	21425	21435	37012	37012					0.09792178253815109
LLVPTGKP	8	Unmodified	_LLVPTGKP_					0	0	0		nc|ENSG00000114646|O95196-3|CSPG5;ENSG00000114646|ENST00000264723|CSPG5;nc|ENSG00000114646|O95196|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76702880859375	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.476	1	37.575	37.075	38.075	0.099277								0	0	0	0.29871	1	2153	2153		23.037	1.3344	1				32462	2782	21425	21435	37013	37013					0.09792178253815109
LLVPTGKP	8	Unmodified	_LLVPTGKP_					0	0	0		nc|ENSG00000114646|O95196-3|CSPG5;ENSG00000114646|ENST00000264723|CSPG5;nc|ENSG00000114646|O95196|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	nc|ENSG00000114646|O95196-3|CSPG5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7668762207031	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.82464	1	2126	2126		21.702	1.2205	1	1619400			32463	2782	21425	21435	37014	37014					0.09792178253815109
LLVPVVGESL	10	Unmodified	_LLVPVVGESL_					0	0	0			REV__ENST00000418747.2_1_9:130877356-130879998:-|nuORF	REV__ENST00000418747.2_1_9:130877356-130879998:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3155517578125	2	513.3157	1024.61685	-0.86606	-0.00044456	1.9618	0.001007	1.0958	0.00056247	513.3165332025184	43.367	1.6866	43.367	42.894	44.58	0.00016785					82	40	3	0	0	0	0.86718	1	3375	3375		27.882	1.0861	1	411860	+		32464	26465	21426	21436	37015	37015					0.10552370796949617
LLVPVVRR	8	Unmodified	_LLVPVVRR_					0	0	0		ENST00000421092.1_1_20:58517212-58517281:+|nuORF	ENST00000421092.1_1_20:58517212-58517281:+|nuORF	ENST00000421092.1_1_20:58517212-58517281:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.3277587890625	2	476.326737	950.63892	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.12	1	109.21	108.71	109.71	0.090057								0	0	0	0.30884	1	13286	13286		13.775	5.544	1				32465	11460	21427	21437	37016	37016					0.161626400560408
LLVQACRLVPL	11	Unmodified	_LLVQACRLVPL_					0	0	0		ENSG00000068097|ENST00000184956|HEATR6;ENST00000591074.1_1_17:58153002-58156275:-|nuORF	ENSG00000068097|ENST00000184956|HEATR6	ENSG00000068097|ENST00000184956|HEATR6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.8795166015625	2	612.878476	1223.7424	1.1743	0.00071971	0.57422	0.00035193	1.7485	0.0010716	612.878611922605	104.31	3.5817	104.48	103.81	107.39	0.17096					311	89	7	0	0	0	0.71452	2	11052	11052;11064		29.15	0	1	83708000			32466	1196	21428	21438	37017;37018	37017					0.13947759381539981
LLVQALEKKR	10	Unmodified	_LLVQALEKKR_					0	0	0			REV__ENST00000506919.1_1_4:146560261-146567442:+|nuORF	REV__ENST00000506919.1_1_4:146560261-146567442:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3857421875	2	599.387522	1196.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.764	1	23.858	23.358	24.358	0.094501								0	0	0	0.45132	1	786	786		22.58	4.3176	1		+		32467	20260	21429	21439	37019	37019					0.16998217627883605
LLVQANKVF	9	Unmodified	_LLVQANKVF_					0	0	0		ENST00000521747.5_1_7:11013513-11013678:+|nuORF	ENST00000521747.5_1_7:11013513-11013678:+|nuORF	ENST00000521747.5_1_7:11013513-11013678:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.312744140625	2	516.316035	1030.61752	0.87326	0.00045088	-4.1358	-0.0021354	-3.2625	-0.0016845	516.3139378124242	103.43	1.1844	103.48	102.98	104.17	0.041481					70	28	3	0	0	0	0.7932	1	11218	11218		25.45	2.4077	1	679730			32468	13176	21430	21440	37020	37020					0.10343210236646883
LLVQLPAP	8	Unmodified	_LLVQLPAP_					0	0	0			REV__ENSG00000184933|ENST00000641196|OR6A2	REV__ENSG00000184933|ENST00000641196|OR6A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747497558594	2	425.773471	849.53239	-0.22834	-9.7219E-05	3.7298	0.0015881	3.5015	0.0014908	425.77496787601876	38.455	1.3684	38.796	38.418	39.787	0.34187					106	32	5	0	0	0	0.87276	1	3175	3175		29.842	1.5873	1	17151000	+		32469	22714	21431	21441	37021	37021					0.10160464770842736
LLVQLPPPAS	10	Unmodified	_LLVQLPPPAS_					0	0	0			REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	517.8187866210938	2	517.815867	1033.61718	2.0914	0.001083	4.1108	0.0021286	6.2022	0.0032116	517.8178511070294	93.15	1.5079	93.088	92.634	94.142	-0.06144					97	35	4	0	0	0	0.64457	1	9865	9865		47.657	1.7054	1	1071700	+		32470	28195	21432	21442	37022	37022					0.10171790516778856
LLVQLPPPAS	10	Unmodified	_LLVQLPPPAS_					0	0	0			REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	517.815867	1033.61718	-0.76455	-0.0003959	7.2703	0.0037647	6.5057	0.0033688	517.8194807313569	93.393	1.3707	93.393	92.981	94.352	0	0.19101	0.0011935	NaN	47.657	67	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	408680	+		32471	28195	21432	21442							0.10171790516778856
LLVQLPPPAS	10	Unmodified	_LLVQLPPPAS_					0	0	0			REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	517.815867	1033.61718	-0.2479	-0.00012837	6.5661	0.0034	6.3182	0.0032716	517.8191439155362	92.908	1.2888	93.134	92.705	93.993	0.22547	-0.068254	0.00046418	NaN	47.657	76	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	879980	+		32472	28195	21432	21442							0.10171790516778856
LLVQLPPPAS	10	Unmodified	_LLVQLPPPAS_					0	0	0			REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	517.815867	1033.61718	0.75077	0.00038876	5.7071	0.0029552	6.4578	0.003344	517.8186340501722	92.966	1.4184	93.124	92.624	94.042	0.15874	-0.077891	-0.00042543	NaN	47.657	91	33	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	765610	+		32473	28195	21432	21442							0.10171790516778856
LLVQLPPPAS	10	Unmodified	_LLVQLPPPAS_					0	0	0			REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	517.815867	1033.61718	-1.557	-0.00080622	8.0421	0.0041643	6.4851	0.0033581	517.8198832098086	93.017	1.3434	93.21	92.692	94.035	0.19239	0.007469	0.0019928	NaN	47.657	82	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	712070	+		32474	28195	21432	21442							0.10171790516778856
LLVQLPPPAS	10	Unmodified	_LLVQLPPPAS_					0	0	0			REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	517.815867	1033.61718	1.6446	0.00085161	4.9532	0.0025649	6.5979	0.0034165	517.8182527646308	92.723	1.261	93.169	92.776	94.037	0.44661	-0.032842	-0.0012061	NaN	47.657	58	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	328950	+		32475	28195	21432	21442							0.10171790516778856
LLVQLPPPAS	10	Unmodified	_LLVQLPPPAS_					0	0	0			REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	517.815867	1033.61718	-0.48331	-0.00025026	7.0605	0.003656	6.5772	0.0034058	517.819326609947	92.829	1.1307	93.278	92.861	93.992	0.44989	0.076233	0.00097622	NaN	47.657	64	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	388920	+		32476	28195	21432	21442							0.10171790516778856
LLVQLVIPL	9	Unmodified	_LLVQLVIPL_					0	0	0			REV__ENSG00000141564|ENST00000306801|RPTOR	REV__ENSG00000141564|ENST00000306801|RPTOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3482360839844	2	504.346803	1006.67905	0.33922	0.00017108	2.4867	0.0012542	2.8259	0.0014252	504.34787681468055	34.758	1.3281	34.968	34.604	35.932	0.21002					94	33	4	0	0	0	0.7932	1	2626	2626		24.203	4.8428	1	1680800	+		32477	19697	21433	21443	37023	37023					0.17598141935934564
LLVQQFSIL	9	Unmodified	_LLVQQFSIL_					0	0	0		ENSG00000151790|ENST00000536354|TDO2;ENST00000512584.5_1_4:156828908-156831355:+|nuORF	ENSG00000151790|ENST00000536354|TDO2	ENSG00000151790|ENST00000536354|TDO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8209228515625	2	530.823692	1059.63283	-1.2397	-0.00065807	-4.086	-0.002169	-5.3257	-0.002827	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.7932	1	7634	7634		23.042	1.0826	1	869100			32478	5143	21434	21444	37024	37024					0.10540077033874695
LLVQRLASRVN	11	Unmodified	_LLVQRLASRVN_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8925170898438	2	634.893503	1267.77245	-0.0069402	-4.4063E-06	-1.6425	-0.0010428	-1.6494	-0.0010472	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.66929	1	10969	10969		36.447	1.2947	1	31286000			32479	7785	21435	21445	37025	37025					0.14927834371087556
LLVQRLASRVN	11	Unmodified	_LLVQRLASRVN_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8926391601562	2	634.893503	1267.77245	-0.13084	-8.307E-05	-1.4622	-0.00092832	-1.593	-0.0010114	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.48529	2	11481	11469;11481		52.937	6.6718	1	40768000			32480	7785	21435	21445	37026;37027	37027					0.14927834371087556
LLVQRLASRVN	11	Unmodified	_LLVQRLASRVN_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8928833007812	2	634.893503	1267.77245	1.3476	0.00085558	-2.8123	-0.0017855	-1.4647	-0.0009299	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.53361	1	11549	11549		49.536	3.5638	1	42647000			32481	7785	21435	21445	37028	37028					0.14927834371087556
LLVQRLASRVN	11	Unmodified	_LLVQRLASRVN_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8927001953125	2	634.893503	1267.77245	0.93451	0.00059331	-2.8314	-0.0017976	-1.8969	-0.0012043	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.66929	1	11237	11237		36.447	2.2742	1	69492000			32482	7785	21435	21445	37029	37029					0.14927834371087556
LLVQRLASRVN	11	Unmodified	_LLVQRLASRVN_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8926391601562	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.53361	2	11187	11187;11235		49.536	13.089	1	66671000			32483	7785	21435	21445	37030;37031	37030					0.14927834371087556
LLVQVGRVRKS	11	Unmodified	_LLVQVGRVRKS_					0	0	0			REV__ENST00000376861.5_1_6:29690684-29691103:+|nuORF	REV__ENST00000376861.5_1_6:29690684-29691103:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.93865966796875	3	418.93834	1253.79319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.234	1	49.272	48.772	49.772	0.037731								0	0	0	0.56276	1	3800	3800		16.53	2.4438	1		+		32484	25847	21436	21446	37032	37032					0.17644424750756116
LLVRARIKPLA	11	Unmodified	_LLVRARIKPLA_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.4334106445312	2	625.426982	1248.83941	5.9501	0.0037213	1.3068	0.0008173	7.2568	0.0045386	625.4276426088085	108.91	0.50605	109	108.73	109.24	0.090057					40	22	2	0	0	0	0.85101	1	13250	13250		5.9211	0	1	1418100	+		32485	21882	21437	21447	37033	37033					0.224944896528541
LLVRATKDT	9	Unmodified	_LLVRATKDT_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.80682373046875	2	508.808574	1015.60259	1.6039	0.0008161	-3.3912	-0.0017255	-1.7873	-0.00090938	508.80675407438747	90.171	1.1085	90.101	89.611	90.719	-0.069977					56	25	3	0	0	0	0.7932	1	9445	9445		17.365	0	1	1285500	+		32486	24039	21438	21448	37034	37034					0.09541718368666352
LLVRFFLF	8	Unmodified	_LLVRFFLF_					0	0	0			REV__ENSG00000083097|ENST00000349129|DOP1A;REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	REV__ENSG00000083097|ENST00000349129|DOP1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.3289184570312	2	527.826038	1053.63752	0.26435	0.00013953	1.5682	0.00082775	1.8326	0.00096728	528.3273044269309	37.812	1.0387	37.911	37.623	38.661	0.099277					64	36	2	0	0	0	0.86791	1	2199	2199		28.254	4.0515	1	251460	+		32487	16847;19729	21439	21449	37035	37035					0.11285005967260986
LLVRGPSVF	9	Unmodified	_LLVRGPSVF_					0	0	0		ENSG00000176715|ENST00000614302|ACSF3;ENST00000562204.1_1_16:89178629-89212354:+|nuORF	ENSG00000176715|ENST00000614302|ACSF3	ENSG00000176715|ENST00000614302|ACSF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.30084228515625	2	494.302927	986.591301	-0.8242	-0.00040741	-3.5027	-0.0017314	-4.3269	-0.0021388	494.3011394049625	97.613	4.008	97.613	96.986	100.99	0					359	95	6	0	0	0	0.77546	3	9796	9754;9796;10008		31.955	5.0535	1	29815000			32488	7095	21440	21450	37036;37037;37038	37037					0.09746941065191095
LLVRGPSVF	9	Unmodified	_LLVRGPSVF_					0	0	0		ENSG00000176715|ENST00000614302|ACSF3;ENST00000562204.1_1_16:89178629-89212354:+|nuORF	ENSG00000176715|ENST00000614302|ACSF3	ENSG00000176715|ENST00000614302|ACSF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.30120849609375	2	494.302927	986.591301	-0.074576	-3.6863E-05	-3.9964	-0.0019754	-4.0709	-0.0020123	494.3008543096205	101.11	1.0407	101.14	100.7	101.74	0.031029					60	24	4	0	0	0	0.78058	1	10800	10800		30.504	2.6214	1	661040			32489	7095	21440	21450	37039	37039					0.09746941065191095
LLVRGPSVF	9	Unmodified	_LLVRGPSVF_					0	0	0		ENSG00000176715|ENST00000614302|ACSF3;ENST00000562204.1_1_16:89178629-89212354:+|nuORF	ENSG00000176715|ENST00000614302|ACSF3	ENSG00000176715|ENST00000614302|ACSF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3006286621094	2	494.302927	986.591301	-0.67103	-0.00033169	-3.8062	-0.0018814	-4.4772	-0.0022131	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.77546	1	10306	10306		31.955	0	1	54981000			32490	7095	21440	21450	37040	37040					0.09746941065191095
LLVRGPSVF	9	Unmodified	_LLVRGPSVF_					0	0	0		ENSG00000176715|ENST00000614302|ACSF3;ENST00000562204.1_1_16:89178629-89212354:+|nuORF	ENSG00000176715|ENST00000614302|ACSF3	ENSG00000176715|ENST00000614302|ACSF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3007507324219	2	494.302927	986.591301	-0.58723	-0.00029027	-3.936	-0.0019456	-4.5232	-0.0022358	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.69914	1	10084	10084		40.573	8.6178	1	65263000			32491	7095	21440	21450	37041	37041					0.09746941065191095
LLVRGPSVF	9	Unmodified	_LLVRGPSVF_					0	0	0		ENSG00000176715|ENST00000614302|ACSF3;ENST00000562204.1_1_16:89178629-89212354:+|nuORF	ENSG00000176715|ENST00000614302|ACSF3	ENSG00000176715|ENST00000614302|ACSF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3006591796875	2	494.302927	986.591301	-1.6335	-0.00080746	-2.893	-0.00143	-4.5265	-0.0022375	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.72402	4	10154	10034;10154;10202;10252		38.806	10.924	1	46933000			32492	7095	21440	21450	37042;37043;37044;37045	37043					0.09746941065191095
LLVRGPSVF	9	Unmodified	_LLVRGPSVF_					0	0	0		ENSG00000176715|ENST00000614302|ACSF3;ENST00000562204.1_1_16:89178629-89212354:+|nuORF	ENSG00000176715|ENST00000614302|ACSF3	ENSG00000176715|ENST00000614302|ACSF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3003234863281	2	494.302927	986.591301	-1.6335	-0.00080746	-2.6847	-0.001327	-4.3182	-0.0021345	494.30150238478427	100.99	1.3749	101.14	100.57	101.95	0.15505					78	33	3	0	0	0	0.77546	1	10516	10516		31.955	5.1588	1	773220			32493	7095	21440	21450	37046	37046					0.09746941065191095
LLVRGVEAYG	10	Unmodified	_LLVRGVEAYG_					0	0	0			REV__nc|ENSG00000132466|O75179-6|ANKRD17	REV__nc|ENSG00000132466|O75179-6|ANKRD17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.32666015625	2	538.808574	1075.60259	1.2796	0.00068947	-1.8068	-0.00097351	-0.52717	-0.00028404	538.8071510295634	100.13	1.106	100.46	99.935	101.04	0.33295					43	27	2	0	0	0	0.37624	1	12128	12128		23.042	0	1	217110	+		32494	19005	21441	21451	37047	37047					0.06781718368665679
LLVRIGAM	8	Unmodified	_LLVRIGAM_					0	0	0		ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENST00000525966.1_1_11:14695245-14695548:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7764892578125	2	436.772948	871.531344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.64	1	26.685	26.185	27.185	0.045507								0	0	0	0.30674	1	1143	1143		15.636	0	1				32495	13247	21442	21452	37048	37048					0.09043927130301199
LLVRIGAM	8	Unmodified	_LLVRIGAM_					0	0	0		ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENST00000525966.1_1_11:14695245-14695548:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7748107910156	2	436.772948	871.531344	1.4332	0.00062597	2.8008	0.0012233	4.234	0.0018493	436.7740845812963	90.925	2.5794	90.858	90.135	92.715	-0.067085					212	61	5	0	0	0	0.86791	13	9504	9494;9504;9562;9599;9611;9623;9636;9661;9673;9697;9709;9722;9734		57.453	16.244	1	18772000			32496	13247	21442	21452	37049;37050;37051;37052;37053;37054;37055;37056;37057;37058;37059;37060;37061	37050					0.09043927130301199
LLVRIGAM	8	Unmodified	_LLVRIGAM_					0	0	0		ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENST00000525966.1_1_11:14695245-14695548:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7747802734375	2	436.772948	871.531344	2.1516	0.00093975	2.1059	0.00091981	4.2575	0.0018596	436.7737664406362	90.685	2.706	90.731	90.049	92.755	0.046448					226	64	5	0	0	0	0.86791	11	9362	9362;9456;9468;9480;9493;9505;9518;9531;9555;9567;9585		46.766	9.738	1	18180000			32497	13247	21442	21452	37062;37063;37064;37065;37066;37067;37068;37069;37070;37071;37072	37062					0.09043927130301199
LLVRIGAM	8	Unmodified	_LLVRIGAM_					0	0	0		ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENST00000525966.1_1_11:14695245-14695548:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.77490234375	2	436.772948	871.531344	0.64809	0.00028307	3.6793	0.001607	4.3274	0.0018901	436.77446931538566	90.701	2.4445	90.855	90.26	92.704	0.15388					187	58	4	0	0	0	0.86791	11	9086	9065;9075;9086;9122;9146;9171;9206;9219;9232;9257;9274		46.766	13.992	1	11761000			32498	13247	21442	21452	37073;37074;37075;37076;37077;37078;37079;37080;37081;37082;37083	37075					0.09043927130301199
LLVRIGAM	8	Unmodified	_LLVRIGAM_					0	0	0		ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENST00000525966.1_1_11:14695245-14695548:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.77490234375	2	436.772948	871.531344	0.9016	0.00039379	3.4833	0.0015214	4.3849	0.0019152	436.7743718767523	90.506	2.2468	90.957	90.49	92.737	0.45058					142	53	4	0	0	0	0.86791	7	10682	10682;10728;10752;10765;10778;10791;10815		44.531	12.158	1	8766100			32499	13247	21442	21452	37084;37085;37086;37087;37088;37089;37090	37084					0.09043927130301199
LLVRIKIKH	9	Unmodified	_LLVRIKIKH_					0	0	0		ENST00000527586.1_1_11:134109936-134113358:+|nuORF;ENSG00000151502|ENST00000281187|VPS26B	ENST00000527586.1_1_11:134109936-134113358:+|nuORF	ENST00000527586.1_1_11:134109936-134113358:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3403930664062	2	560.389868	1118.76518	-0.40579	-0.0002274	2.9048	0.0016278	2.499	0.0014004	560.392172819572	102.68	0.40577	102.68	102.55	102.96	0					16	9	3	0	0	0	0.20789	1	10519	10519		12.207	4.5166	1	66334			32500	5123	21443	21453	37091	37091					0.21055146561320726
LLVRKLPPLC	10	Unmodified	_LLVRKLPPLC_					0	0	0		ENST00000528042.1_1_11:57480099-57505208:+|nuORF;nc|ENSG00000213593|Q9Y320-2|TMX2;ENSG00000213593|ENST00000278422|TMX2	ENST00000528042.1_1_11:57480099-57505208:+|nuORF	ENST00000528042.1_1_11:57480099-57505208:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	576.3705444335938	2	576.370287	1150.72602	-0.73719	-0.0004249	-1.2079	-0.00069619	-1.9451	-0.0011211	576.3694812255828	46.694	1.765	46.68	45.831	47.597	-0.013821					91	46	2	0	0	0	0.8488	1	3857	3857		17.365	0	1	191760			32501	8596	21444	21454	37092	37092					0.1566867821543383
LLVRKLPPLC	10	Unmodified	_LLVRKLPPLC_					0	0	0		ENST00000528042.1_1_11:57480099-57505208:+|nuORF;nc|ENSG00000213593|Q9Y320-2|TMX2;ENSG00000213593|ENST00000278422|TMX2	ENST00000528042.1_1_11:57480099-57505208:+|nuORF	ENST00000528042.1_1_11:57480099-57505208:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3692016601562	2	576.370287	1150.72602	-0.0032095	-1.8498E-06	-1.7983	-0.0010365	-1.8015	-0.0010383	576.3691255987982	49.503	2.0721	49.41	48.483	50.555	-0.093182					130	52	3	0	0	0	0.84874	2	3878	3878;3890		18.324	6.1176	1	379010			32502	8596	21444	21454	37093;37094	37093					0.1566867821543383
LLVRKLRE	8	Unmodified	_LLVRKLRE_					0	0	0		ENSG00000130545|ENST00000600229|CRB3;nc|ENSG00000130545|Q9BUF7-2|CRB3	ENSG00000130545|ENST00000600229|CRB3	ENSG00000130545|ENST00000600229|CRB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8421020507812	2	513.842751	1025.67095	0.38457	0.00019761	-0.40979	-0.00021057	-0.025219	-1.2959E-05	513.842510250407	21.529	0.48262	21.465	21.287	21.77	-0.064058					31	18	2	0	0	0	0.88915	1	600	600		35.201	0	1	70537			32503	3654	21445	21455	37095	37095					0.15914007739161207
LLVRKRLLGL	10	Unmodified	_LLVRKRLLGL_					0	0	0		ENSG00000151553|ENST00000369248|FHIP2A;nc|ENSG00000151553|Q5W0V3-2|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8667602539062	2	590.91625	1179.81795	-0.23953	-0.00014154	2.136	0.0012622	1.8965	0.0011206	590.916101560171	104.02	0.16622	104.02	103.88	104.04	0					5	3	2	0	0	0	0.37624	1	10687	10687		24.203	14.497	1	58202			32504	5125	21446	21456	37096	37096					0.2352310462413243
LLVRLREKIE	10	Unmodified	_LLVRLREKIE_					0	0	0			REV__nc|ENSG00000163618|Q9ULU8-2|CADPS	REV__nc|ENSG00000163618|Q9ULU8-2|CADPS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	423.6065673828125	3	423.606478	1267.79761	0.51522	0.00021825	-0.11299	-4.7862E-05	0.40224	0.00017039	423.60620249603153	15.725	0.23169	15.701	15.595	15.827	-0.024035					12	7	2	0	0	0	0.85633	1	68	68		21.686	0.8486	1	234820	+		32505	20944	21447	21457	37097	37097					0.17441889173665004
LLVRPPPH	8	Unmodified	_LLVRPPPH_					0	0	0		ENST00000392038.6_1_19:40738806-40739223:-|nuORF	ENST00000392038.6_1_19:40738806-40739223:-|nuORF	ENST00000392038.6_1_19:40738806-40739223:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7907409667969	2	464.789987	927.565421	-1.9025	-0.00088428	3.506	0.0016296	1.6035	0.00074527	464.7914872059108	34.459	1.5924	34.459	34.009	35.601	0					104	42	3	0	0	0	0.82464	1	1841	1841		21.702	0.7554	1	277220			32506	11011	21448	21458	37098	37098					0.09874091613551172
LLVRRLPV	8	Unmodified	_LLVRRLPV_					0	0	0			REV__nc|ENSG00000004939|P02730-2|SLC4A1	REV__nc|ENSG00000004939|P02730-2|SLC4A1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.6452941894531	2	483.334562	964.65457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.45	1	117.39	116.89	117.89	-0.064972								0	0	0	0.31173	1	14034	14034		9.4706	0.64823	1		+		32507	16069	21449	21459	37099	37099					0.1708292657307311
LLVRRSEA	8	Unmodified	_LLVRRSEA_					0	0	0			REV__ENSG00000125817|ENST00000379751|CENPB	REV__ENSG00000125817|ENST00000379751|CENPB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28759765625	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.82464	1	10112	10112		21.702	1.2205	1	50946000	+		32508	18671	21450	21460	37100	37100					0.0874858239999412
LLVRYREVF	9	Unmodified	_LLVRYREVF_					0	0	0			REV__nc|ENSG00000137474|Q13402-5|MYO7A	REV__nc|ENSG00000137474|Q13402-5|MYO7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8557739257812	2	597.853316	1193.69208	2.1625	0.0012929	2.6511	0.001585	4.8137	0.0028779	597.8546696490685	92.423	2.9286	92.359	90.439	93.367	-0.06414					206	70	4	0	0	0	0.58151	4	9839	9703;9716;9750;9839		47.916	6.0556	1	2186000	+		32509	19385	21451	21461	37101;37102;37103;37104	37104					0.10297973048022868
LLVRYREVF	9	Unmodified	_LLVRYREVF_					0	0	0			REV__nc|ENSG00000137474|Q13402-5|MYO7A	REV__nc|ENSG00000137474|Q13402-5|MYO7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8557739257812	2	597.853316	1193.69208	0.93582	0.00055948	3.9067	0.0023357	4.8426	0.0028951	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.58151	3	9353	9270;9353;9439		47.916	6.489	1	2638300	+		32510	19385	21451	21461	37105;37106;37107	37106					0.10297973048022868
LLVRYREVF	9	Unmodified	_LLVRYREVF_					0	0	0			REV__nc|ENSG00000137474|Q13402-5|MYO7A	REV__nc|ENSG00000137474|Q13402-5|MYO7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8560791015625	2	597.853316	1193.69208	0.82161	0.0004912	4.0289	0.0024087	4.8505	0.0028999	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.78058	2	9245	9245;9411		30.504	2.6214	1	2486400	+		32511	19385	21451	21461	37108;37109	37108					0.10297973048022868
LLVSASLLD	9	Unmodified	_LLVSASLLD_					0	0	0		ENST00000528624.5_1_1:26146700-26149787:+|nuORF;ENST00000525713.5_3_1:26146700-26150235:+|nuORF	ENST00000528624.5_1_1:26146700-26149787:+|nuORF	ENST00000528624.5_1_1:26146700-26149787:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7774353027344	2	465.778951	929.543348	-0.11871	-5.5291E-05	-2.8407	-0.0013231	-2.9594	-0.0013784	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.78536	1	8106	8106		29.15	2.4566	1	1083800			32512	13242	21452	21462	37110	37110					0.07575822354476713
LLVSCKKL	8	Carbamidomethyl (C)	_LLVSC(Carbamidomethyl (C))KKL_	LLVSC(1)KKL		LLVSC(48)KKL		0	1	0			REV__ENST00000505030.5_1_5:87961954-87962140:-|nuORF	REV__ENST00000505030.5_1_5:87961954-87962140:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.80108642578125	2	480.799163	959.583773	-0.54823	-0.00026359	3.9246	0.001887	3.3764	0.0016234	480.80093903656257	95.17	4.1898	95.217	94.619	98.809	0.046982					308	97	5	0	0	0	0.92457	1	10012	10012		47.916	15.961	1	18729000	+		32513	27871	21453	21463	37111	37111	339				0.1023646547325825
LLVSDGVLL	9	Unmodified	_LLVSDGVLL_					0	0	0		ENST00000575397.5_1_16:74698599-74700696:-|nuORF	ENST00000575397.5_1_16:74698599-74700696:-|nuORF	ENST00000575397.5_1_16:74698599-74700696:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.79058837890625	2	464.789318	927.564084	-1.1101	-0.00051598	3.984	0.0018517	2.8738	0.0013357	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.69914	1	2067	2067		40.573	8.6178	1	415400			32514	14049	21454	21464	37112	37112					0.09740412734140591
LLVSGDTYVHL	11	Unmodified	_LLVSGDTYVHL_					0	0	0			REV__ENSG00000158125|ENST00000379416|XDH	REV__ENSG00000158125|ENST00000379416|XDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.8356323242188	2	608.832246	1215.64994	5.7403	0.0034949	2.8553	0.0017384	8.5956	0.0052333	608.8338988848703	110.04	0.64108	110.11	109.94	110.58	0.067993					56	22	4	0	0	0	0.72918	1	13387	13387		26.693	4.1133	1	3727200	+		32515	20590	21455	21465	37113	37113					0.05073952848988483
LLVSISTEI	9	Unmodified	_LLVSISTEI_					0	0	0			REV__ENSG00000105983|ENST00000353442|LMBR1	REV__ENSG00000105983|ENST00000353442|LMBR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7909240722656	2	487.792058	973.569563	-0.085472	-4.1693E-05	-2.8417	-0.0013862	-2.9272	-0.0014279	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.77546	3	8292	8292;8385;8434		31.955	2.1133	1	1889700	+		32516	17589	21456	21466	37114;37115;37116	37114					0.08172091525932501
LLVSISTEI	9	Unmodified	_LLVSISTEI_					0	0	0			REV__ENSG00000105983|ENST00000353442|LMBR1	REV__ENSG00000105983|ENST00000353442|LMBR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.79046630859375	2	487.792058	973.569563	-0.48923	-0.00023864	-2.4115	-0.0011763	-2.9007	-0.0014149	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.69914	1	9974	9974		40.573	0	1	1599600	+		32517	17589	21456	21466	37117	37117					0.08172091525932501
LLVSKACVR	9	Unmodified	_LLVSKACVR_					0	0	0			REV__ENSG00000163377|ENST00000295569|TAFA4	REV__ENSG00000163377|ENST00000295569|TAFA4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3024597167969	2	494.802237	987.589921	2.8509	0.0014107	-2.5066	-0.0012403	0.34432	0.00017037	494.8012040433181	112.87	0.58244	112.84	112.65	113.23	-0.024811					17	13	2	0	0	0	0.20789	1	12484	12484		16.473	3.514	1	411470	+		32518	20906	21457	21467	37118	37118					0.09562983704768158
LLVSKRAITHN	11	Unmodified	_LLVSKRAITHN_					0	0	0		ENST00000525549.5_1_11:59945684-59950490:-|nuORF;ENST00000530179.1_1_11:59945684-59950490:-|nuORF	ENST00000525549.5_1_11:59945684-59950490:-|nuORF	ENST00000525549.5_1_11:59945684-59950490:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.9224548339844	3	417.922578	1250.7459	0.73411	0.0003068	-1.4619	-0.00061096	-0.7278	-0.00030416	417.9219647760214	105.64	2.8346	105.75	104.94	107.78	0.10766					247	69	5	0	0	0	0.76322	1	11278	11278		22.562	0	1	29053000			32519	13241	21458	21468	37119	37119					0.13056145479754377
LLVSKRAITHN	11	Unmodified	_LLVSKRAITHN_					0	0	0		ENST00000525549.5_1_11:59945684-59950490:-|nuORF;ENST00000530179.1_1_11:59945684-59950490:-|nuORF	ENST00000525549.5_1_11:59945684-59950490:-|nuORF	ENST00000525549.5_1_11:59945684-59950490:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92236328125	3	417.922578	1250.7459	-1.8945	-0.00079175	1.1534	0.00048205	-0.74105	-0.0003097	417.92301973502657	105.61	2.7753	105.68	104.89	107.66	0.073112					226	67	4	0	0	0	0.70737	1	11152	11152		26.75	0	1	18308000			32520	13241	21458	21468	37120	37120					0.13056145479754377
LLVSKWRQLV	10	Unmodified	_LLVSKWRQLV_					0	0	0		ENST00000397492.1_1_22:32346295-32352776:+|nuORF	ENST00000397492.1_1_22:32346295-32352776:+|nuORF	ENST00000397492.1_1_22:32346295-32352776:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3941040039062	2	621.390065	1240.76558	-0.078753	-4.8936E-05	4.3785	0.0027208	4.2997	0.0026718	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.84112	1	11015	11015		37.159	2.9866	1	10411000			32521	11153	21459	21469	37121	37121					0.15482521490503132
LLVSLASEV	9	Unmodified	_LLVSLASEV_					0	0	0		nc|ENSG00000125505|Q96N66-2|MBOAT7	nc|ENSG00000125505|Q96N66-2|MBOAT7	nc|ENSG00000125505|Q96N66-2|MBOAT7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7779541015625	2	465.778951	929.543348	-0.1189	-5.538E-05	-2.6882	-0.0012521	-2.8071	-0.0013075	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.72402	1	7733	7733		38.806	10.552	1	345200			32522	14893	21460	21470	37122	37122					0.07575822354465345
LLVSLESTL	9	Unmodified	_LLVSLESTL_					0	0	0		ENSG00000131187|ENST00000253496|F12	ENSG00000131187|ENST00000253496|F12	ENSG00000131187|ENST00000253496|F12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.791259765625	2	487.792058	973.569563	-0.085472	-4.1693E-05	-2.8417	-0.0013862	-2.9272	-0.0014279	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.72402	1	8244	8244		38.806	6.8513	1	1889700			32523	3719	21461	21471	37123	37123					0.08172091525955238
LLVSLESTL	9	Unmodified	_LLVSLESTL_					0	0	0		ENSG00000131187|ENST00000253496|F12	ENSG00000131187|ENST00000253496|F12	ENSG00000131187|ENST00000253496|F12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.79071044921875	2	487.792058	973.569563	-0.70733	-0.00034503	-2.2896	-0.0011169	-2.9969	-0.0014619	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.69914	1	8213	8213		40.573	0	1	2348200			32524	3719	21461	21471	37124	37124					0.08172091525955238
LLVSLESTL	9	Unmodified	_LLVSLESTL_					0	0	0		ENSG00000131187|ENST00000253496|F12	ENSG00000131187|ENST00000253496|F12	ENSG00000131187|ENST00000253496|F12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7906188964844	2	487.792058	973.569563	0.64551	0.00031488	-3.596	-0.0017541	-2.9505	-0.0014392	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.77546	1	8284	8284		31.955	1.4512	1	1929300			32525	3719	21461	21471	37125	37125					0.08172091525955238
LLVSLESTL	9	Unmodified	_LLVSLESTL_					0	0	0		ENSG00000131187|ENST00000253496|F12	ENSG00000131187|ENST00000253496|F12	ENSG00000131187|ENST00000253496|F12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7906188964844	2	487.792058	973.569563	-1.5393	-0.00075085	-1.4318	-0.00069844	-2.9711	-0.0014493	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.69914	2	8187	8187;8223		40.573	3.5441	1	1760400			32526	3719	21461	21471	37126;37127	37126					0.08172091525955238
LLVSLLSET	9	Unmodified	_LLVSLLSET_					0	0	0		nc|ENSG00000089682|Q96IZ5-3|RBM41	nc|ENSG00000089682|Q96IZ5-3|RBM41	nc|ENSG00000089682|Q96IZ5-3|RBM41	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.79107666015625	2	487.792058	973.569563	-0.71211	-0.00034736	-2.5053	-0.0012221	-3.2174	-0.0015694	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.69914	1	7946	7946		40.573	1.5511	1	678280			32527	14797	21462	21472	37128	37128					0.08172091525955238
LLVSPISDT	9	Unmodified	_LLVSPISDT_					0	0	0		ENSG00000186567|ENST00000358777|CEACAM19;nc|ENSG00000186567|Q7Z692|CEACAM19	ENSG00000186567|ENST00000358777|CEACAM19	ENSG00000186567|ENST00000358777|CEACAM19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7672119140625	2	472.768583	943.522613	-1.1355	-0.00053681	-1.706	-0.00080653	-2.8414	-0.0013433	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.77546	1	7872	7872		31.955	0	1	292450			32528	7805	21463	21473	37129	37129					0.04859231974796785
LLVSRHLPVF	10	Unmodified	_LLVSRHLPVF_					0	0	0		ENSG00000139985|ENST00000603540|ADAM21;ENST00000530196.1_1_14:70713981-70714470:-|nuORF	ENSG00000139985|ENST00000603540|ADAM21	ENSG00000139985|ENST00000603540|ADAM21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8668823242188	2	590.863683	1179.71281	0.84845	0.00050132	3.6717	0.0021695	4.5201	0.0026708	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.86589	1	11155	11155		29.15	1.2673	1	94771000			32529	4406	21464	21474	37130	37130					0.13014563427691428
LLVSRHLPVF	10	Unmodified	_LLVSRHLPVF_					0	0	0		ENSG00000139985|ENST00000603540|ADAM21;ENST00000530196.1_1_14:70713981-70714470:-|nuORF	ENSG00000139985|ENST00000603540|ADAM21	ENSG00000139985|ENST00000603540|ADAM21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8668823242188	2	590.863683	1179.71281	0.89156	0.00052679	3.7018	0.0021873	4.5934	0.0027141	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.84112	2	10967	10967;11149		37.159	2.9866	1	84183000			32530	4406	21464	21474	37131;37132	37131					0.13014563427691428
LLVSRHLPVF	10	Unmodified	_LLVSRHLPVF_					0	0	0		ENSG00000139985|ENST00000603540|ADAM21;ENST00000530196.1_1_14:70713981-70714470:-|nuORF	ENSG00000139985|ENST00000603540|ADAM21	ENSG00000139985|ENST00000603540|ADAM21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8674926757812	2	590.863683	1179.71281	1.3812	0.0008161	3.8747	0.0022894	5.2559	0.0031055	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.84112	2	12529	12512;12529		37.159	1.5408	1	6168400			32531	4406	21464	21474	37133;37134	37134					0.13014563427691428
LLVSRHLPVF	10	Unmodified	_LLVSRHLPVF_					0	0	0		ENSG00000139985|ENST00000603540|ADAM21;ENST00000530196.1_1_14:70713981-70714470:-|nuORF	ENSG00000139985|ENST00000603540|ADAM21	ENSG00000139985|ENST00000603540|ADAM21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8668823242188	2	590.863683	1179.71281	3.2055	0.001894	2.0239	0.0011959	5.2294	0.0030899	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.8608	2	12572	12562;12572		34.173	4.6304	1	6398400			32532	4406	21464	21474	37135;37136	37136					0.13014563427691428
LLVSSTLEL	9	Unmodified	_LLVSSTLEL_					0	0	0		ENST00000492001.1_1_7:44796309-44796525:+|nuORF	ENST00000492001.1_1_7:44796309-44796525:+|nuORF	ENST00000492001.1_1_7:44796309-44796525:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7907409667969	2	487.792058	973.569563	-0.085708	-4.1808E-05	-3.0809	-0.0015028	-3.1666	-0.0015447	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.76996	1	8121	8121		33.516	1.9367	1	514950			32533	12696	21465	21475	37137	37137					0.08172091525955238
LLVSSVCGTHI	11	Unmodified	_LLVSSVCGTHI_					0	0	0			REV__ENST00000380191.8_1_10:5807578-5807647:-|nuORF	REV__ENST00000380191.8_1_10:5807578-5807647:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.8101196289062	2	564.807716	1127.60088	3.0107	0.0017004	1.8168	0.0010261	4.8274	0.0027266	564.8086416193407	110	1.6919	109.97	109.64	111.33	-0.027641					152	59	3	0	0	0	0.68378	2	12164	12164;12178		34.173	6.0911	1	4099500	+		32534	25941	21466	21476	37138;37139	37138					0.042183412884014615
LLVSSYIIIL	10	Unmodified	_LLVSSYIIIL_					0	0	0		ENSG00000176281|ENST00000315915|OR4K5	ENSG00000176281|ENST00000315915|OR4K5	ENSG00000176281|ENST00000315915|OR4K5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3634033203125	2	567.36265	1132.71075	-0.82344	-0.00046719	2.4008	0.0013621	1.5773	0.00089493	567.3638410249442	44.579	2.1787	44.545	43.955	46.134	-0.03347					156	50	5	0	0	0	0.84874	1	3527	3527		18.324	0.95945	1	2613600			32535	7070	21467	21477	37140	37140					0.14970089899247796
LLVSTLGDI	9	Unmodified	_LLVSTLGDI_					0	0	0		nc|ENSG00000167118|Q9BTM9-2|URM1	nc|ENSG00000167118|Q9BTM9-2|URM1	nc|ENSG00000167118|Q9BTM9-2|URM1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77728271484375	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.747	1	79.747	79.247	80.247	0								0	0	0	0.2969	1	7341	7341		31.955	1.4512	1				32536	15073	21468	21478	37141	37141					0.07575822354476713
LLVSWVPGR	9	Unmodified	_LLVSWVPGR_					0	0	0			REV__ENSG00000129204|ENST00000574788|USP6	REV__ENSG00000129204|ENST00000574788|USP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8085327148438	2	513.808377	1025.6022	-0.47161	-0.00024232	1.6041	0.00082419	1.1325	0.00058187	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.78058	1	4099	4099		30.504	6.3009	1	1552900	+		32537	18810	21469	21479	37142	37142					0.09042343439477918
LLVSWVPGR	9	Unmodified	_LLVSWVPGR_					0	0	0			REV__ENSG00000129204|ENST00000574788|USP6	REV__ENSG00000129204|ENST00000574788|USP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8087768554688	2	513.808377	1025.6022	-0.12671	-6.5103E-05	1.3179	0.00067714	1.1912	0.00061204	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.7932	2	4001	4001;4109		25.45	4.7181	1	1731500	+		32538	18810	21469	21479	37143;37144	37143					0.09042343439477918
LLVSWVPGR	9	Unmodified	_LLVSWVPGR_					0	0	0			REV__ENSG00000129204|ENST00000574788|USP6	REV__ENSG00000129204|ENST00000574788|USP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8086547851562	2	513.808377	1025.6022	-0.18035	-9.2668E-05	1.1688	0.00060056	0.98848	0.00050789	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.78058	1	4138	4138		30.504	0	1	1777300	+		32539	18810	21469	21479	37145	37145					0.09042343439477918
LLVTASPVI	9	Unmodified	_LLVTASPVI_					0	0	0		ENSG00000121350|ENST00000240651|PYROXD1	ENSG00000121350|ENST00000240651|PYROXD1	ENSG00000121350|ENST00000240651|PYROXD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79278564453125	2	456.791861	911.569169	-1.4265	-0.00065161	4.1949	0.0019162	2.7684	0.0012646	456.7936601394385	37.79	2.3589	37.801	37.33	39.689	0.011173					114	54	4	0	0	0	0.7932	1	2596	2596		26.796	1.3459	1	2031500			32540	3176	21470	21480	37146	37146					0.10984716596760791
LLVTASPVI	9	Unmodified	_LLVTASPVI_					0	0	0		ENSG00000121350|ENST00000240651|PYROXD1	ENSG00000121350|ENST00000240651|PYROXD1	ENSG00000121350|ENST00000240651|PYROXD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7931213378906	2	456.791861	911.569169	0.20144	9.2015E-05	2.7795	0.0012696	2.9809	0.0013616	456.79301419254114	38.74	1.332	38.834	38.396	39.728	0.094318					137	38	4	0	0	0	0.77546	1	2346	2346		31.955	6.5047	1	1693200			32541	3176	21470	21480	37147	37147					0.10984716596760791
LLVTATLVP	9	Unmodified	_LLVTATLVP_					0	0	0		ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.79998779296875	2	463.799686	925.584819	-1.1872	-0.0005506	2.6442	0.0012264	1.4571	0.00067579	463.80074391702703	41.648	1.5471	41.608	41.079	42.626	-0.039845					90	38	3	0	0	0	0.7932	1	3221	3221		24.203	0	1	510860			32542	5998	21471	21481	37148	37148					0.11905003113815837
LLVTATLVP	9	Unmodified	_LLVTATLVP_					0	0	0		ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.79937744140625	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.76996	1	3652	3652		33.516	1.5607	1	251610			32543	5998	21471	21481	37149	37149					0.11905003113815837
LLVTATLVP	9	Unmodified	_LLVTATLVP_					0	0	0		ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8005676269531	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3164	3164		17.365	0	1	942760			32544	5998	21471	21481	37150	37150					0.11905003113815837
LLVTATLVP	9	Unmodified	_LLVTATLVP_					0	0	0		ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	ENSG00000164742|ENST00000297323|ADCY1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.80133056640625	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.7932	1	3285	3285		11.511	0	1	210360			32545	5998	21471	21481	37151	37151					0.11905003113815837
LLVTEELPL	9	Unmodified	_LLVTEELPL_					0	0	0		nc|ENSG00000170909|Q8IYS5-5|OSCAR	nc|ENSG00000170909|Q8IYS5-5|OSCAR	nc|ENSG00000170909|Q8IYS5-5|OSCAR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3180541992188	2	513.807708	1025.60086	-0.37894	-0.0001947	4.1402	0.0021273	3.7613	0.0019326	513.8091999711922	54.031	1.3726	54.086	53.559	54.932	0.054962					58	43	2	0	0	0	0.20789	1	4404	4404		40.573	10.069	1	79631			32546	15090	21472	21482	37152	37152					0.08908664560044599
LLVTEKPL	8	Unmodified	_LLVTEKPL_					0	0	0		ENST00000296824.3_1_5:205851-205899:-|nuORF	ENST00000296824.3_1_5:205851-205899:-|nuORF	ENST00000296824.3_1_5:205851-205899:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.793212890625	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.86288	1	2108	2108		26.796	1.3459	1	3484100			32547	9750	21473	21483	37153	37153					0.10984716596738053
LLVTESVLT	9	Unmodified	_LLVTESVLT_					0	0	0			REV__nc|ENSG00000101773|Q99708-2|RBBP8	REV__nc|ENSG00000101773|Q99708-2|RBBP8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7906188964844	2	487.792058	973.569563	0.84662	0.00041298	-3.8119	-0.0018594	-2.9653	-0.0014465	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.77546	1	8770	8770		31.955	0.37597	1	2238600	+		32548	17302	21474	21484	37154	37154					0.08172091525932501
LLVTESVLT	9	Unmodified	_LLVTESVLT_					0	0	0			REV__nc|ENSG00000101773|Q99708-2|RBBP8	REV__nc|ENSG00000101773|Q99708-2|RBBP8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7905578613281	2	487.792058	973.569563	0.62349	0.00030414	-4.0887	-0.0019944	-3.4652	-0.0016903	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.7932	1	7802	7802		24.203	1.1603	1	479320	+		32549	17302	21474	21484	37155	37155					0.08172091525932501
LLVTESVLT	9	Unmodified	_LLVTESVLT_					0	0	0			REV__nc|ENSG00000101773|Q99708-2|RBBP8	REV__nc|ENSG00000101773|Q99708-2|RBBP8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.79052734375	2	487.792058	973.569563	0.64551	0.00031488	-3.596	-0.0017541	-2.9505	-0.0014392	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.77546	1	8224	8224		31.955	0	1	1929300	+		32550	17302	21474	21484	37156	37156					0.08172091525932501
LLVTGIPEGL	10	Unmodified	_LLVTGIPEGL_					0	0	0		nc|ENSG00000204851|Q9ULN7-1|PNMA8B;ENSG00000204851|ENST00000599531|PNMA8B	nc|ENSG00000204851|Q9ULN7-1|PNMA8B	nc|ENSG00000204851|Q9ULN7-1|PNMA8B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	507.3003234863281	2	506.307875	1010.6012	0.039931	2.0218E-05	2.5018	0.0012667	2.5417	0.0012869	506.309067319854	51.406	0.79984	51.404	50.901	51.701	-0.0020447					27	18	2	0	0	0	0.37624	1	4427	4427		37.159	15.199	1	63637			32551	8491	21475	21485	37157	37157					0.09632084279917308
LLVTGLPSL	9	Unmodified	_LLVTGLPSL_					0	0	0		ENST00000520701.5_1_5:150867854-150868163:+|nuORF	ENST00000520701.5_1_5:150867854-150868163:+|nuORF	ENST00000520701.5_1_5:150867854-150868163:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7901306152344	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.7932	1	3117	3117		24.203	0	1	608260			32552	13160	21476	21486	37158	37158					0.10984716596760791
LLVTIIAAD	9	Unmodified	_LLVTIIAAD_					0	0	0		ENST00000509910.1_1_5:115167175-115167292:-|nuORF	ENST00000509910.1_1_5:115167175-115167292:-|nuORF	ENST00000509910.1_1_5:115167175-115167292:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7898864746094	2	464.789318	927.564084	-1.1101	-0.00051598	3.984	0.0018517	2.8738	0.0013357	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.7932	1	2201	2201		25.45	4.9683	1	415400			32553	12999	21477	21487	37159	37159					0.09740412734117854
LLVTIIAAD	9	Unmodified	_LLVTIIAAD_					0	0	0		ENST00000509910.1_1_5:115167175-115167292:-|nuORF	ENST00000509910.1_1_5:115167175-115167292:-|nuORF	ENST00000509910.1_1_5:115167175-115167292:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.791259765625	2	464.789318	927.564084	0.17035	7.9177E-05	2.8409	0.0013204	3.0113	0.0013996	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.58151	1	1800	1800		47.916	7.343	1	283920			32554	12999	21477	21487	37160	37160					0.09740412734117854
LLVTIMVW	8	Unmodified	_LLVTIMVW_					0	0	0			REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7907409667969	2	487.790807	973.56706	-1.0481	-0.00051127	0.8293	0.00040452	-0.21883	-0.00010674	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.87276	1	8002	8002		29.842	3.0454	1	1176800	+		32555	28439	21478	21488	37161	37161					0.0792196458729677
LLVTIMVW	8	Unmodified	_LLVTIMVW_					0	0	0			REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7906188964844	2	487.790807	973.56706	0.54992	0.00026825	-1.1084	-0.00054067	-0.55848	-0.00027242	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.86791	1	8427	8427		28.254	1.4582	1	633420	+		32556	28439	21478	21488	37162	37162					0.0792196458729677
LLVTIMVW	8	Unmodified	_LLVTIMVW_					0	0	0			REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7906799316406	2	487.790807	973.56706	0.84663	0.00041298	-1.2469	-0.00060822	-0.40027	-0.00019525	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.87807	1	8711	8711		31.579	4.886	1	2238600	+		32557	28439	21478	21488	37163	37163					0.0792196458729677
LLVTIMVW	8	Unmodified	_LLVTIMVW_					0	0	0			REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7906188964844	2	487.790807	973.56706	-1.4694	-0.00071678	0.88841	0.00043336	-0.58103	-0.00028342	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.83466	1	8294	8294		23.037	1.3344	1	607090	+		32558	28439	21478	21488	37164	37164					0.0792196458729677
LLVTIMVW	8	Unmodified	_LLVTIMVW_					0	0	0			REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.79058837890625	2	487.790807	973.56706	-0.70733	-0.00034503	0.27543	0.00013435	-0.4319	-0.00021068	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.87276	2	8141	8141;8201		31.579	5.3375	1	2348200	+		32559	28439	21478	21488	37165;37166	37165					0.0792196458729677
LLVTIMVW	8	Unmodified	_LLVTIMVW_					0	0	0			REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7906188964844	2	487.790807	973.56706	0.64551	0.00031488	-1.031	-0.00050289	-0.38544	-0.00018801	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.83466	2	8140	8140;8296		39.021	0	1	1929300	+		32560	28439	21478	21488	37167;37168	37167					0.0792196458729677
LLVTIMVW	8	Unmodified	_LLVTIMVW_					0	0	0			REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	REV__ENST00000538689.4_1_8:11696323-11696383:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79071044921875	2	487.790807	973.56706	-1.5393	-0.00075085	1.1332	0.00055277	-0.40607	-0.00019808	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.87807	1	8235	8235		31.579	4.7828	1	1760400	+		32561	28439	21478	21488	37169	37169					0.0792196458729677
LLVTLLGPS	9	Unmodified	_LLVTLLGPS_					0	0	0		ENST00000231498.7_1_5:37342710-37348640:-|nuORF	ENST00000231498.7_1_5:37342710-37348640:-|nuORF	ENST00000231498.7_1_5:37342710-37348640:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7928466796875	2	456.791861	911.569169	-1.0391	-0.00047467	3.9273	0.001794	2.8882	0.0013193	456.79357477476594	37.792	1.0999	37.741	37.317	38.417	-0.050373					69	24	4	0	0	0	0.76996	1	2557	2557		33.516	1.5607	1	2264600			32562	9214	21479	21489	37170	37170					0.10984716596749422
LLVTLLGPS	9	Unmodified	_LLVTLLGPS_					0	0	0		ENST00000231498.7_1_5:37342710-37348640:-|nuORF	ENST00000231498.7_1_5:37342710-37348640:-|nuORF	ENST00000231498.7_1_5:37342710-37348640:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.791015625	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.74721	1	3092	3092		37.159	6.6555	1	608260			32563	9214	21479	21489	37171	37171					0.10984716596749422
LLVTRVVEISI	11	Unmodified	_LLVTRVVEISI_					0	0	0		ENSG00000129925|ENST00000431232|PGAP6	ENSG00000129925|ENST00000431232|PGAP6	ENSG00000129925|ENST00000431232|PGAP6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3919067382812	2	621.395013	1240.77547	-0.078752	-4.8936E-05	-3.5843	-0.0022272	-3.663	-0.0022762	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.76322	1	10753	10753		19.104	0	1	10411000			32564	3609	21480	21490	37172	37172					0.1647166470522734
LLVTRVVEISI	11	Unmodified	_LLVTRVVEISI_					0	0	0		ENSG00000129925|ENST00000431232|PGAP6	ENSG00000129925|ENST00000431232|PGAP6	ENSG00000129925|ENST00000431232|PGAP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.392578125	2	621.395013	1240.77547	-1.2196	-0.00075786	-2.6137	-0.0016241	-3.8333	-0.002382	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.7342	1	11078	11078		25.574	3.6142	1	23459000			32565	3609	21480	21490	37173	37173					0.1647166470522734
LLVTTTLFLL	10	Unmodified	_LLVTTTLFLL_					0	0	0		ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3629150390625	2	567.36265	1132.71075	-1.2185	-0.00069132	2.7113	0.0015383	1.4929	0.000847	567.3640514854945	44.308	2.4797	44.308	43.541	46.02	0					178	60	4	0	0	0	0.86452	1	3167	3167		30.504	0	1	1364200			32566	9024	21481	21491	37174	37174					0.1497008989922506
LLVTTTLFLL	10	Unmodified	_LLVTTTLFLL_					0	0	0		ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.36328125	2	567.36265	1132.71075	-0.8743	-0.00049604	2.4089	0.0013667	1.5346	0.00087069	567.3638800486743	44.538	2.1986	44.515	43.895	46.093	-0.023079					155	51	5	0	0	0	0.84874	1	3491	3491		18.324	1.8513	1	2273000			32567	9024	21481	21491	37175	37175					0.1497008989922506
LLVTTTLFLL	10	Unmodified	_LLVTTTLFLL_					0	0	0		ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3633422851562	2	567.36265	1132.71075	0.20972	0.00011899	1.3081	0.00074215	1.5178	0.00086113	567.3632440181018	44.63	2.2677	44.626	43.93	46.198	-0.0041618					153	53	5	0	0	0	0.86589	1	3472	3472		29.15	0	1	2377000			32568	9024	21481	21491	37176	37176					0.1497008989922506
LLVTTTLFLL	10	Unmodified	_LLVTTTLFLL_					0	0	0		ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3629150390625	2	567.36265	1132.71075	0.36025	0.00020439	1.3571	0.00076996	1.7173	0.00097435	567.3632714206227	44.36	2.296	44.409	43.67	45.966	0.048996					151	56	4	0	0	0	0.85939	1	3090	3090		23.042	2.0956	1	1558100			32569	9024	21481	21491	37177	37177					0.1497008989922506
LLVTTTLFLL	10	Unmodified	_LLVTTTLFLL_					0	0	0		ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3629760742188	2	567.36265	1132.71075	-1.4485	-0.00082182	2.3813	0.001351	0.93278	0.00052922	567.3639779227798	42.372	2.1865	42.806	41.562	43.749	0.4334					145	55	5	0	0	0	0.85438	3	3775	3729;3751;3775		29.15	4.7181	1	13610000			32570	9024	21481	21491	37178;37179;37180	37180					0.1497008989922506
LLVTTTLFLL	10	Unmodified	_LLVTTTLFLL_					0	0	0		ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	ENSG00000277556|ENST00000374779|OR13C5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.364013671875	2	567.36265	1132.71075	-0.94241	-0.00053469	1.9029	0.0010796	0.96052	0.00054496	567.3637060270148	42.168	1.9304	42.865	42.418	44.348	0.69754					144	47	5	0	0	0	0.86589	1	3813	3813		29.15	2.4566	1	16501000			32571	9024	21481	21491	37181	37181					0.1497008989922506
LLVTVRVM	8	Oxidation (M)	_LLVTVRVM(Oxidation (M))_		LLVTVRVM(1)		LLVTVRVM(48)	0	0	1		ENST00000566987.5_1_16:71898855-71901807:-|nuORF	ENST00000566987.5_1_16:71898855-71901807:-|nuORF	ENST00000566987.5_1_16:71898855-71901807:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.7929992675781	2	473.791338	945.568123	1.2996	0.00061576	2.9961	0.0014195	4.2958	0.0020353	473.7925489701058	88.987	2.0839	88.914	88.554	90.638	-0.07238					97	48	4	0	0	0	0.92457	1	9272	9272		47.916	10.756	1	495980			32572	13944	21482	21492	37182	37182		205			0.09316178956214571
LLVVCLDR	8	Unmodified	_LLVVCLDR_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7771911621094	2	465.775688	929.536823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.347	1	80.287	79.787	80.787	-0.059692								0	0	0	0.30811	1	8070	8070		45.952	1.8352	1		+		32573	21648	21483	21493	37183	37183					0.06923605922099796
LLVVDTPGL	9	Unmodified	_LLVVDTPGL_					0	0	0		ENSG00000179144|ENST00000313543|GIMAP7	ENSG00000179144|ENST00000313543|GIMAP7	ENSG00000179144|ENST00000313543|GIMAP7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7803955078125	2	463.781493	925.548434	-0.96623	-0.00044812	-3.7263	-0.0017282	-4.6925	-0.0021763	463.7798881427561	38.615	0.61809	38.956	38.697	39.316	0.34187					41	14	4	0	0	0	0.39977	1	3173	3173		57.811	2.3071	1	2100000			32574	7249	21484	21494	37184	37184					0.08268126217080862
LLVVGLALLV	10	Unmodified	_LLVVGLALLV_					0	0	0		ENSG00000282881|ENST00000697682|TMEM275	ENSG00000282881|ENST00000697682|TMEM275	ENSG00000282881|ENST00000697682|TMEM275	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3090515136719	2	505.354628	1008.6947	-0.43	-0.0002173	-1.9655	-0.00099325	-2.3955	-0.0012106	505.35361231717934	55.073	0.83404	55.024	54.744	55.578	-0.049271					34	23	2	0	0	0	0.37624	1	4580	4580		26.796	7.4361	1	160540			32575	9056	21485	21495	37185	37185					0.19070428452982924
LLVVHHLTLAM	11	Unmodified	_LLVVHHLTLAM_					0	0	0			REV__ENSG00000110427|ENST00000658780|KIAA1549L	REV__ENSG00000110427|ENST00000658780|KIAA1549L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.8709106445312	2	623.870651	1245.72675	0.9237	0.00057627	-1.3791	-0.00086036	-0.45537	-0.00028409	623.8696844669474	104.46	2.0179	104.58	104.11	106.13	0.11684					143	50	4	0	0	0	0.75495	1	11072	11072		20.947	3.4789	1	2763900	+		32576	17812	21486	21496	37186	37186					0.11371472864493626
LLVVIPLKLH	10	Unmodified	_LLVVIPLKLH_					0	0	0		ENSG00000206530|ENST00000393845|CFAP44	ENSG00000206530|ENST00000393845|CFAP44	ENSG00000206530|ENST00000393845|CFAP44	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.8958129882812	2	572.894452	1143.77435	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.955	1	61.509	61.009	62.009	0.55386								0	0	0	0.45132	1	6505	6505		7.1934	0.45781	1				32577	8559	21487	21497	37187	37187					0.2082149512698379
LLVVKLLLL	9	Unmodified	_LLVVKLLLL_					0	0	0		ENST00000555988.1_2_14:75356010-75360059:+|nuORF	ENST00000555988.1_2_14:75356010-75360059:+|nuORF	ENST00000555988.1_2_14:75356010-75360059:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.3792114257812	2	512.380646	1022.74674	0.14276	7.3148E-05	-3.0064	-0.0015404	-2.8636	-0.0014673	512.3789679666013	85.559	0.82632	85.998	85.619	86.446	0.43967					48	19	3	0	0	0	0.7932	1	9983	9983		12.959	5.2689	1	424500			32578	13741	21488	21498	37188	37188					0.23627591866761577
LLVVLAIITP	10	Unmodified	_LLVVLAIITP_					0	0	0			REV__nc|ENSG00000168032|O75355-2|ENTPD3	REV__nc|ENSG00000168032|O75355-2|ENTPD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3612060546875	2	526.359911	1050.70527	-0.016718	-8.7995E-06	2.2479	0.0011832	2.2312	0.0011744	526.3609420824897	35.324	1.4285	35.312	34.729	36.157	-0.012199					134	33	5	0	0	0	0.88106	1	2119	2119		12.207	0	1	5338900	+		32579	21453	21489	21499	37189	37189					0.1819441110740172
LLVVLGFLVLR	11	Unmodified	_LLVVLGFLVLR_					0	0	0		ENSG00000149328|ENST00000535456|GLB1L2	ENSG00000149328|ENST00000535456|GLB1L2	ENSG00000149328|ENST00000535456|GLB1L2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3927001953125	2	621.420834	1240.82712	0.92094	0.00057229	-2.9454	-0.0018303	-2.0245	-0.0012581	621.4195493225835	104.75	0.12106	104.86	104.78	104.9	0.10766					4	2	2	0	0	0	0.17478	1	11129	11129		21.96	7.095	1	59681			32580	5020	21490	21500	37190	37190					0.21633453189792817
LLVVLLTGE	9	Unmodified	_LLVVLLTGE_					0	0	0		ENST00000496458.1_1_2:198262805-198263212:-|nuORF	ENST00000496458.1_1_2:198262805-198263212:-|nuORF	ENST00000496458.1_1_2:198262805-198263212:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8041687011719	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.72402	1	2355	2355		38.806	8.3025	1	336090			32581	12785	21491	21501	37191	37191					0.11580985768239316
LLVVLSPPALD	11	Unmodified	_LLVVLSPPALD_					0	0	0		ENSG00000204301|ENST00000375023|NOTCH4	ENSG00000204301|ENST00000375023|NOTCH4	ENSG00000204301|ENST00000375023|NOTCH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.853271484375	2	568.849907	1135.68526	2.887	0.0016423	2.6801	0.0015246	5.5671	0.0031668	568.8513377958367	102.33	3.4335	102.28	101.79	105.22	-0.047005					328	82	6	0	0	0	0.72228	1	11277	11277		27.882	1.0861	1	53482000			32582	8431	21492	21502	37192	37192					0.12284615376802321
LLVVLWIRW	9	Unmodified	_LLVVLWIRW_					0	0	0		chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1;nc|ENSG00000147255|Q8N6C5-2|IGSF1;chrX:131289275-131299651|15|14.27|0.46|4.94|-|ENST00000370904|IGSF1,IGSF1;ENSG00000147255|ENST00000361420|IGSF1;nc|ENSG00000147255|Q8N6C5-4|IGSF1	chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1	chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3806762695312	2	599.378969	1196.74339	0.97492	0.00058434	0.82655	0.00049541	1.8015	0.0010798	599.3792959797308	103.23	2.9032	103.41	102.97	105.87	0.18297					219	73	5	0	0	0	0.7932	1	10873	10873		26.796	1.222	1	22539000			32583	542	21493	21503	37193	37193					0.15288341812743056
LLVVLWIRW	9	Unmodified	_LLVVLWIRW_					0	0	0		chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1;nc|ENSG00000147255|Q8N6C5-2|IGSF1;chrX:131289275-131299651|15|14.27|0.46|4.94|-|ENST00000370904|IGSF1,IGSF1;ENSG00000147255|ENST00000361420|IGSF1;nc|ENSG00000147255|Q8N6C5-4|IGSF1	chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1	chrX:131289275-131289406|16|14.38|0.57|4.65|-|ENST00000652189|IGSF1,IGSF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3796997070312	2	599.378969	1196.74339	-1.2913	-0.00077396	3.1636	0.0018962	1.8723	0.0011222	599.3806932084216	103.36	2.8938	103.47	103.07	105.96	0.11494					245	72	6	0	0	0	0.78851	1	10865	10865		28.254	1.207	1	20299000			32584	542	21493	21503	37194	37194					0.15288341812743056
LLVVSALH	8	Unmodified	_LLVVSALH_					0	0	0		ENSG00000142227|ENST00000270221|EMP3	ENSG00000142227|ENST00000270221|EMP3	ENSG00000142227|ENST00000270221|EMP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.29486083984375	2	426.271096	850.527639	0.50219	0.00021407	-0.84704	-0.00036107	-0.34485	-0.000147	426.27092165592677	75.084	0.38931	75.216	74.964	75.353	0.13208					15	10	2	0	0	0	0.4196	1	6946	6946		49.211	2.4444	1	33143			32585	4551	21494	21504	37195	37195					0.09639580628083877
LLVVVGAWLS	10	Unmodified	_LLVVVGAWLS_					0	0	0			REV__ENSG00000064886|ENST00000369748|CHI3L2	REV__ENSG00000064886|ENST00000369748|CHI3L2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.3070678710938	2	528.826235	1055.63792	0.35521	0.00018784	-1.1063	-0.00058505	-0.75111	-0.00039721	528.8255760264054	63.314	0.9184	63.868	63.469	64.387	0.55449					44	19	3	0	0	0	0.37624	1	6842	6842		23.042	0	1	372980	+		32586	16485	21495	21505	37196	37196					0.11232380896467475
LLVVVGMISL	10	Unmodified	_LLVVVGMISL_					0	0	0			REV__ENST00000573209.1_1_17:7358720-7358933:+|nuORF	REV__ENST00000573209.1_1_17:7358720-7358933:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.30322265625	2	522.330296	1042.64604	-0.22536	-0.00011771	-2.8827	-0.0015057	-3.108	-0.0016234	522.3286389493429	85.181	0.70927	85.628	85.276	85.986	0.44736					30	17	2	0	0	0	0.37624	1	9991	9991		29.15	0	1	316370	+		32587	28957	21496	21506	37197	37197					0.12642191821601045
LLVVVIIVVE	10	Unmodified	_LLVVVIIVVE_					0	0	0			REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3738403320312	2	548.373018	1094.73148	-1.4498	-0.00079504	3.6321	0.0019917	2.1823	0.0011967	548.3748802153438	35.47	1.1138	35.47	34.867	35.98	0					77	29	3	0	0	0	0.88541	1	1964	1964		11.511	0.64546	1	301910	+		32588	18095	21497	21507	37198	37198					0.18790680278902983
LLVVVIIVVE	10	Unmodified	_LLVVVIIVVE_					0	0	0			REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3751831054688	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.90957	1	2501	2501		7.6903	0	1	314410	+		32589	18095	21497	21507	37199	37199					0.18790680278902983
LLVVVIIVVE	10	Unmodified	_LLVVVIIVVE_					0	0	0			REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3734741210938	2	548.373018	1094.73148	-0.014191	-7.7821E-06	2.2319	0.0012239	2.2178	0.0012162	548.374000997207	35.509	1.288	35.453	35.002	36.29	-0.055901					73	28	3	0	0	0	0.88106	1	2378	2378		12.207	0	1	330260	+		32590	18095	21497	21507	37200	37200					0.18790680278902983
LLVVVIIVVE	10	Unmodified	_LLVVVIIVVE_					0	0	0			REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3739624023438	2	548.373018	1094.73148	-0.49859	-0.00027341	2.6391	0.0014472	2.1405	0.0011738	548.3742417671841	35.313	1.4945	35.32	34.937	36.431	0.0063896					91	33	3	0	0	0	0.8488	1	2227	2227		17.365	6.4994	1	324130	+		32591	18095	21497	21507	37201	37201					0.18790680278902983
LLVVVIIVVE	10	Unmodified	_LLVVVIIVVE_					0	0	0			REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3741455078125	2	548.373018	1094.73148	-0.93576	-0.00051314	3.3649	0.0018452	2.4292	0.0013321	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.84874	1	2397	2397		18.324	1.8513	1	651720	+		32592	18095	21497	21507	37202	37202					0.18790680278902983
LLVVVIIVVE	10	Unmodified	_LLVVVIIVVE_					0	0	0			REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	REV__ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	548.3731079101562	2	548.373018	1094.73148	0.27438	0.00015046	2.33	0.0012777	2.6044	0.0014282	548.3741056570226	37.106	1.654	37.206	36.174	37.827	0.099277					123	52	3	0	0	0	0.91594	1	2128	2128		6.7355	0.42289	1	393850	+		32593	18095	21497	21507	37203	37203					0.18790680278902983
LLVVVPVSLL	10	Unmodified	_LLVVVPVSLL_					0	0	0		nc|ENSG00000158714|Q9P0V8-2|SLAMF8;ENSG00000158714|ENST00000289707|SLAMF8	nc|ENSG00000158714|Q9P0V8-2|SLAMF8	nc|ENSG00000158714|Q9P0V8-2|SLAMF8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3610229492188	2	526.359911	1050.70527	-1.5923	-0.00083811	3.7176	0.0019568	2.1254	0.0011187	526.3617428180578	33.41	1.543	33.41	33.111	34.654	0					182	44	5	0	0	0	0.8488	1	1857	1857		17.365	0	1	7280900			32594	5494	21498	21508	37204	37204					0.18194411107424457
LLVVVPVSLL	10	Unmodified	_LLVVVPVSLL_					0	0	0		nc|ENSG00000158714|Q9P0V8-2|SLAMF8;ENSG00000158714|ENST00000289707|SLAMF8	nc|ENSG00000158714|Q9P0V8-2|SLAMF8	nc|ENSG00000158714|Q9P0V8-2|SLAMF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3610229492188	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.88106	1	2111	2111		12.207	0	1	5020100			32595	5494	21498	21508	37205	37205					0.18194411107424457
LLVVVPVSLL	10	Unmodified	_LLVVVPVSLL_					0	0	0		nc|ENSG00000158714|Q9P0V8-2|SLAMF8;ENSG00000158714|ENST00000289707|SLAMF8	nc|ENSG00000158714|Q9P0V8-2|SLAMF8	nc|ENSG00000158714|Q9P0V8-2|SLAMF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3610229492188	2	526.359911	1050.70527	-0.47346	-0.00024921	2.7476	0.0014462	2.2741	0.001197	526.3612126681783	35.14	1.5704	35.146	34.727	36.297	0.0063934					147	36	5	0	0	0	0.85939	1	2150	2150		23.042	0	1	2682400			32596	5494	21498	21508	37206	37206					0.18194411107424457
LLVVYVPFV	9	Unmodified	_LLVVYVPFV_					0	0	0			REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8274536132812	2	524.825704	1047.63685	-0.63596	-0.00033377	3.0614	0.0016067	2.4255	0.0012729	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.78292	1	10158	10158		29.842	0.69198	1	15330000	+		32597	24774	21499	21509	37207	37207					0.1149416652756372
LLVVYVPFV	9	Unmodified	_LLVVYVPFV_					0	0	0			REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.826904296875	2	524.825704	1047.63685	-0.038995	-2.0466E-05	2.2661	0.0011893	2.2272	0.0011689	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.78292	3	10641	10618;10641;10920		29.842	8.1392	1	26414000	+		32598	24774	21499	21509	37208;37209;37210	37209					0.1149416652756372
LLVVYVPFV	9	Unmodified	_LLVVYVPFV_					0	0	0			REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8268432617188	2	524.825704	1047.63685	-0.038871	-2.04E-05	3.1603	0.0016586	3.1214	0.0016382	524.8272063900822	102.47	1.0685	102.49	101.99	103.06	0.01989					58	25	3	0	0	0	0.72098	1	10948	10948		39.021	7.4917	1	402610	+		32599	24774	21499	21509	37211	37211					0.1149416652756372
LLVVYVPFV	9	Unmodified	_LLVVYVPFV_					0	0	0			REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8270874023438	2	524.825704	1047.63685	2.9134	0.001529	-0.74099	-0.00038889	2.1724	0.0011401	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.78292	1	11077	11077		29.842	5.6388	1	30867000	+		32600	24774	21499	21509	37212	37212					0.1149416652756372
LLVVYVPFV	9	Unmodified	_LLVVYVPFV_					0	0	0			REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.827392578125	2	524.825704	1047.63685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.36	1	102.31	101.81	102.81	-0.047005								0	0	0	0.30219	1	11173	11173		29.842	0.69198	1		+		32601	24774	21499	21509	37213	37213					0.1149416652756372
LLVVYVPFV	9	Unmodified	_LLVVYVPFV_					0	0	0			REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8272094726562	2	524.825704	1047.63685	1.2413	0.00065145	0.91828	0.00048194	2.1595	0.0011334	524.8261082044575	99.092	3.5228	99.14	98.41	101.93	0.047852					344	82	7	0	0	0	0.78292	6	10762	10666;10702;10762;10774;10786;10970		29.842	4.3914	1	29910000	+		32602	24774	21499	21509	37214;37215;37216;37217;37218;37219	37216					0.1149416652756372
LLVVYVPFV	9	Unmodified	_LLVVYVPFV_					0	0	0			REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8265991210938	2	524.825704	1047.63685	1.241	0.00065132	1.7862	0.00093744	3.0272	0.0015888	524.8265446316465	102.17	1.0632	102.22	101.85	102.91	0.04319					53	25	3	0	0	0	0.72098	1	11069	11069		39.021	9.18	1	396530	+		32603	24774	21499	21509	37220	37220					0.1149416652756372
LLVVYVPFV	9	Unmodified	_LLVVYVPFV_					0	0	0			REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8271484375	2	524.825704	1047.63685	-0.1321	-6.933E-05	2.2122	0.001161	2.0801	0.0010917	524.8267772586088	99.003	3.4379	99.226	98.52	101.96	0.22263					298	81	5	0	0	0	0.78292	2	10373	10373;10652		29.842	3.0454	1	31133000	+		32604	24774	21499	21509	37221;37222	37221					0.1149416652756372
LLVVYVPFV	9	Unmodified	_LLVVYVPFV_					0	0	0			REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	REV__ENST00000301923.13_2_22:40720677-40720767:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8280029296875	2	524.825704	1047.63685	0.8139	0.00042716	1.4579	0.00076513	2.2718	0.0011923	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.78292	2	10461	10461;10657		29.842	0	1	27719000	+		32605	24774	21499	21509	37223;37224	37223					0.1149416652756372
LLVWFHLRNIR	11	Unmodified	_LLVWFHLRNIR_					0	0	0			REV__ENST00000574285.2_1_16:9203969-9204164:+|nuORF	REV__ENST00000574285.2_1_16:9203969-9204164:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.9615478515625	3	489.629617	1465.86702	0.17066	8.3561E-05	-4.0962	-0.0020056	-3.9255	-0.0019221	489.6275270289365	16.998	0.34298	16.387	16.177	16.52	-0.6107					19	7	4	0	0	0	0.74022	2	199	199;210		24.232	4.9691	1	133220	+		32606	28969	21500	21510	37225;37226	37225					0.15272392913061594
LLVWIGRPR	9	Unmodified	_LLVWIGRPR_					0	0	0			REV__ENST00000564160.1_1_16:2722719-2722887:-|nuORF	REV__ENST00000564160.1_1_16:2722719-2722887:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.3533325195312	2	555.350743	1108.68693	1.3083	0.00072658	3.2077	0.0017814	4.516	0.002508	555.3524110053091	100.9	2.53	100.95	100.38	102.91	0.046356					182	60	5	0	0	0	0.7932	1	10920	10920		24.203	2.2429	1	5418400	+		32607	27307	21501	21511	37227	37227					0.13693713976067556
LLVWLLVLRLP	11	Unmodified	_LLVWLLVLRLP_					0	0	0		ENST00000470521.1_1_1:222791452-222819114:+|nuORF;nc|ENSG00000154305|Q5JRA6-2|MIA3;ENSG00000154305|ENST00000344922|MIA3;nc|ENSG00000154305|Q5JRA6-3|MIA3	ENST00000470521.1_1_1:222791452-222819114:+|nuORF	ENST00000470521.1_1_1:222791452-222819114:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	445.6360778808594	3	445.635598	1333.88496	0.19586	8.7284E-05	0.45153	0.00020122	0.6474	0.0002885	445.6356257228967	39.482	1.6512	39.57	39.034	40.685	0.088375					153	46	5	0	0	0	0.80593	1	2419	2419		10.104	0.8921	1	2635800			32608	5272	21502	21512	37228	37228					0.23137715115194624
LLVWLLVLRLP	11	Unmodified	_LLVWLLVLRLP_					0	0	0		ENST00000470521.1_1_1:222791452-222819114:+|nuORF;nc|ENSG00000154305|Q5JRA6-2|MIA3;ENSG00000154305|ENST00000344922|MIA3;nc|ENSG00000154305|Q5JRA6-3|MIA3	ENST00000470521.1_1_1:222791452-222819114:+|nuORF	ENST00000470521.1_1_1:222791452-222819114:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.63592529296875	3	445.635598	1333.88496	-0.63519	-0.00028306	1.146	0.0005107	0.5108	0.00022763	445.6360586466579	37.863	1.1296	38.176	37.864	38.994	0.31312					138	28	6	0	0	0	0.8498	1	3068	3068		6.001	2.382	1	20399000			32609	5272	21502	21512	37229	37229					0.23137715115194624
LLVWRWDRDRY	11	Unmodified	_LLVWRWDRDRY_					0	0	0			REV__ENSG00000243811|ENST00000216099|APOBEC3D	REV__ENSG00000243811|ENST00000216099|APOBEC3D	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.361083984375	3	526.616037	1576.82628	0.40161	0.00021149	0.70376	0.00037061	1.1054	0.00058211	526.9498772590543	33.762	0.072376	33.716	33.656	33.728	-0.045815					4	2	2	0	0	0	0.181	1	1655	1655		5.6988	0	1	19152	+		32610	23844	21503	21513	37230	37230					0.06094006802777585
LLVYCKRKHRR	11	Unmodified	_LLVYCKRKHRR_					0	0	0		ENST00000517617.1_1_8:68864752-69023167:+|nuORF;nc|ENSG00000046889|Q70Z35-3|PREX2;ENST00000529398.5_1_8:68864629-69017594:+|nuORF;nc|ENSG00000046889|Q70Z35-4|PREX2;ENSG00000046889|ENST00000288368|PREX2	ENST00000517617.1_1_8:68864752-69023167:+|nuORF	ENST00000517617.1_1_8:68864752-69023167:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.298828125	3	491.297873	1470.87179	-0.62536	-0.00030724	2.1182	0.0010407	1.4929	0.00073344	491.2988723972927	107.84	0.50114	107.98	107.57	108.07	0.13866					45	12	6	0	0	0	0.80813	1	11605	11605		9.6461	0	1	325610000			32611	953	21504	21514	37231	37231					0.1551895378415793
LLVYCKRKHRR	11	Unmodified	_LLVYCKRKHRR_					0	0	0		ENST00000517617.1_1_8:68864752-69023167:+|nuORF;nc|ENSG00000046889|Q70Z35-3|PREX2;ENST00000529398.5_1_8:68864629-69017594:+|nuORF;nc|ENSG00000046889|Q70Z35-4|PREX2;ENSG00000046889|ENST00000288368|PREX2	ENST00000517617.1_1_8:68864752-69023167:+|nuORF	ENST00000517617.1_1_8:68864752-69023167:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.2986755371094	3	491.297873	1470.87179	0.7944	0.00039029	1.384	0.00067995	2.1784	0.0010702	491.29846333999706	107.88	0.47234	107.96	107.54	108.01	0.084412					45	11	6	0	0	0	0.80593	1	11587	11587		10.104	1.6966	1	262750000			32612	953	21504	21514	37232	37232					0.1551895378415793
LLVYCKRKHRR	11	Unmodified	_LLVYCKRKHRR_					0	0	0		ENST00000517617.1_1_8:68864752-69023167:+|nuORF;nc|ENSG00000046889|Q70Z35-3|PREX2;ENST00000529398.5_1_8:68864629-69017594:+|nuORF;nc|ENSG00000046889|Q70Z35-4|PREX2;ENSG00000046889|ENST00000288368|PREX2	ENST00000517617.1_1_8:68864752-69023167:+|nuORF	ENST00000517617.1_1_8:68864752-69023167:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.29931640625	3	491.297873	1470.87179	-1.6433	-0.00080736	4.1976	0.0020623	2.5543	0.0012549	491.2998752438531	107.88	0.47935	107.92	107.49	107.97	0.036125					44	11	6	0	0	0	0.78683	1	11519	11519		14.086	2.1536	1	187950000			32613	953	21504	21514	37233	37233					0.1551895378415793
LLVYRKHPK	9	Unmodified	_LLVYRKHPK_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.3673706054688	2	577.36385	1152.71315	3.0575	0.0017653	1.3884	0.0008016	4.4459	0.0025669	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.7932	1	11418	11418		24.203	0	1	11111000			32614	6419	21505	21515	37234	37234					0.14289983147546081
LLVYSLNLHKL	11	Unmodified	_LLVYSLNLHKL_					0	0	0			REV__ENSG00000279169|ENST00000625019|PRAMEF13	REV__ENSG00000279169|ENST00000625019|PRAMEF13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.273193359375	3	438.271096	1311.79146	2.7278	0.0011955	1.5423	0.00067595	4.2701	0.0018715	438.27166879991887	107.29	1.1275	107.26	106.75	107.88	-0.034134					106	26	5	0	0	0	0.74022	1	11870	11870		24.232	5.7008	1	5019700	+		32615	23497	21506	21516	37235	37235					0.14803370942127003
LLVYSLNLHKL	11	Unmodified	_LLVYSLNLHKL_					0	0	0			REV__ENSG00000279169|ENST00000625019|PRAMEF13	REV__ENSG00000279169|ENST00000625019|PRAMEF13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2730407714844	3	438.271096	1311.79146	2.0595	0.00090261	2.1338	0.00093518	4.1933	0.0018378	438.2719380139852	107.11	1.2259	107.15	106.67	107.9	0.035614					128	28	5	0	0	0	0.74022	1	11737	11737		24.232	0.85391	1	4659700	+		32616	23497	21506	21516	37236	37236					0.14803370942127003
LLWFIPGLTT	10	Unmodified	_LLWFIPGLTT_					0	0	0			REV__ENST00000592573.1_1_19:55556444-55559456:-|nuORF	REV__ENST00000592573.1_1_19:55556444-55559456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.8402099609375	2	580.839342	1159.66413	0.60129	0.00034925	1.4028	0.00081479	2.0041	0.001164	580.839949137506	69.631	0.83281	69.76	69.457	70.29	0.1291					104	40	3	0	0	0	0.86589	1	6287	6287		29.15	3.6994	1	14222000	+		32617	20719	21507	21517	37237	37237					0.09068650067911221
LLWFWWLEYYY	11	Unmodified	_LLWFWWLEYYY_					0	0	0			REV__ENST00000473467.5_1_2:74685729-74687181:+|nuORF	REV__ENST00000473467.5_1_2:74685729-74687181:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.7823791503906	4	421.207698	1680.80169	-1.8629	-0.00078467	-3.9849	-0.0016785	-5.8478	-0.0024631	421.2062374979519	36.119	0.27649	36.151	35.959	36.235	0.031132					9	6	2	0	0	0	0.18304	1	1953	1953		3.4087	1.99	1	46304	+		32618	23806	21508	21518	37238	37238					-0.01148066123278113
LLWFWWLEYYY	11	Unmodified	_LLWFWWLEYYY_					0	0	0			REV__ENST00000473467.5_1_2:74685729-74687181:+|nuORF	REV__ENST00000473467.5_1_2:74685729-74687181:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.8126831054688	3	561.274506	1680.80169	-0.27618	-0.00015501	1.1835	0.00066429	0.90737	0.00050928	561.6111097374608	60.538	0.9039	61.091	60.392	61.296	0.55323					29	24	2	0	0	0	0.18364	1	6409	6409		0.37141	0	1	345940	+		32619	23806	21508	21518	37239	37239					-0.01148066123278113
LLWILLLETS	10	Unmodified	_LLWILLLETS_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9158935546875	3	400.912797	1199.71656	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.18	1	113.2	112.7	113.7	0.020027								0	0	0	0.45132	1	13677	13677		16.717	0.71061	1				32620	7195	21509	21519	37240	37240					0.12469188410909737
LLWILMRLPP	10	Unmodified	_LLWILMRLPP_					0	0	0			REV__ENST00000561950.1_1_15:28650025-28650148:+|nuORF	REV__ENST00000561950.1_1_15:28650025-28650148:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3814697265625	2	626.385937	1250.75732	0.92591	0.00057998	-0.43841	-0.00027461	0.4875	0.00030537	626.3855975122624	111.88	0.55626	111.95	111.53	112.09	0.069542					31	16	2	0	0	0	0.37624	1	12048	12048		19.36	0	1	1287200	+		32621	28786	21510	21520	37241	37241					0.14197251249538567
LLWKAGVVHP	10	Unmodified	_LLWKAGVVHP_					0	0	0			REV__ENSG00000163781|ENST00000260810|TOPBP1	REV__ENSG00000163781|ENST00000260810|TOPBP1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.340576171875	2	560.337301	1118.66005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.57	1	104.76	104.26	105.26	0.18887								0	0	0	0.45132	1	12731	12731		42.396	14.514	1		+		32622	20968	21511	21521	37242	37242					0.10546605364879724
LLWKKIHRMV	10	Unmodified	_LLWKKIHRMV_					0	0	0		ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9398193359375	3	441.940915	1322.80092	0.33265	0.00014701	-2.8636	-0.0012655	-2.5309	-0.0011185	441.9395069624772	55.282	1.2267	55.373	54.736	55.962	0.091167					101	37	4	0	0	0	0.84816	1	4682	4682		17.468	0.30126	1	451030			32623	3129	21512	21522	37243	37243					0.15242860746639053
LLWKKISN	8	Unmodified	_LLWKKISN_					0	0	0		ENSG00000165716|ENST00000371692|DIPK1B;nc|ENSG00000165716|Q5VUD6-2|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.79913330078125	2	501.310752	1000.60695	-0.82695	-0.00041456	-4.4515	-0.0022316	-5.2784	-0.0026461	501.3100474096531	95.141	0.76727	95.141	94.847	95.614	0					21	17	2	0	0	0	0.4196	1	9413	9413		12.959	0	1	127480			32624	6117	21513	21523	37244	37244					0.10667227582234773
LLWKKISYTN	10	Unmodified	_LLWKKISYTN_					0	0	0		ENSG00000154511|ENST00000370310|DIPK1A	ENSG00000154511|ENST00000370310|DIPK1A	ENSG00000154511|ENST00000370310|DIPK1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.368408203125	2	633.366256	1264.71796	1.4714	0.00093196	3.0805	0.0019511	4.5519	0.002883	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.86409	1	9966	9966		34.173	2.5383	1	11430000			32625	5282	21514	21524	37245	37245					0.09618822499669477
LLWKKISYTN	10	Unmodified	_LLWKKISYTN_					0	0	0		ENSG00000154511|ENST00000370310|DIPK1A	ENSG00000154511|ENST00000370310|DIPK1A	ENSG00000154511|ENST00000370310|DIPK1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.8709716796875	2	633.366256	1264.71796	1.4972	0.00094828	3.1984	0.0020258	4.6957	0.0029741	633.3681812370636	95.449	2.3087	95.87	94.551	96.859	0.42051					197	55	4	0	0	0	0.64457	1	11401	11401		47.657	1.6851	1	3612700			32626	5282	21514	21524	37246	37246					0.09618822499669477
LLWKKISYTN	10	Unmodified	_LLWKKISYTN_					0	0	0		ENSG00000154511|ENST00000370310|DIPK1A	ENSG00000154511|ENST00000370310|DIPK1A	ENSG00000154511|ENST00000370310|DIPK1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.368896484375	2	633.366256	1264.71796	2.3091	0.0014625	2.2296	0.0014121	4.5387	0.0028746	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.76747	1	11808	11808		44.377	7.9304	1	10333000			32627	5282	21514	21524	37247	37247					0.09618822499669477
LLWKPRNGNRR	11	Unmodified	_LLWKPRNGNRR_					0	0	0		ENST00000580482.5_1_17:63793289-63848140:-|nuORF	ENST00000580482.5_1_17:63793289-63848140:-|nuORF	ENST00000580482.5_1_17:63793289-63848140:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.6121520996094	3	470.612738	1408.81638	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.477	1	62.598	62.098	63.098	0.1209								0	0	0	0.56276	1	5448	5448		19.263	5.1767	1				32628	14094	21515	21525	37248	37248					0.1283286358807345
LLWKQLTSD	9	Unmodified	_LLWKQLTSD_					0	0	0			REV__nc|ENSG00000144278|Q8IUC8-3|GALNT13	REV__nc|ENSG00000144278|Q8IUC8-3|GALNT13	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.8124389648438	2	552.308406	1102.60226	0.77405	0.00042751	-4.1516	-0.002293	-3.3776	-0.0018655	552.306238373589	81.51	1.7341	81.568	80.996	82.731	0.057808					55	39	2	0	0	0	0.20789	1	8118	8118		19.997	1.7347	1	44729	+		32629	29905	21516	21526	37249	37249					0.05506298648788288
LLWLDTLQIRI	11	Unmodified	_LLWLDTLQIRI_					0	0	0		ENST00000400556.7_1_18:9588232-9588770:-|nuORF	ENST00000400556.7_1_18:9588232-9588770:-|nuORF	ENST00000400556.7_1_18:9588232-9588770:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.94854736328125	3	461.950134	1382.82857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.31	1	107.45	106.95	107.95	0.13866								0	0	0	0.56276	1	11523	11523		20.03	1.4994	1				32630	11225	21517	21527	37250	37250					0.15247042487885665
LLWLDTLQIRI	11	Unmodified	_LLWLDTLQIRI_					0	0	0		ENST00000400556.7_1_18:9588232-9588770:-|nuORF	ENST00000400556.7_1_18:9588232-9588770:-|nuORF	ENST00000400556.7_1_18:9588232-9588770:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.9483947753906	3	461.950134	1382.82857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.54	1	107.68	107.18	108.18	0.13866								0	0	0	0.56276	1	11556	11556		25.126	2.5463	1				32631	11225	21517	21527	37251	37251					0.15247042487885665
LLWLDTLQIRI	11	Unmodified	_LLWLDTLQIRI_					0	0	0		ENST00000400556.7_1_18:9588232-9588770:-|nuORF	ENST00000400556.7_1_18:9588232-9588770:-|nuORF	ENST00000400556.7_1_18:9588232-9588770:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.9482727050781	3	461.950134	1382.82857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.62	1	107.76	107.26	108.26	0.13866								0	0	0	0.56276	1	11568	11568		19.263	1.7947	1				32632	11225	21517	21527	37252	37252					0.15247042487885665
LLWLELLRRLR	11	Unmodified	_LLWLELLRRLR_					0	0	0		nc|ENSG00000100033|O43272-2|PRODH;nc|ENSG00000100033|O43272-1|PRODH;ENSG00000100033|ENST00000357068|PRODH;ENST00000313755.9_1_22:18900690-18907344:-|nuORF	nc|ENSG00000100033|O43272-2|PRODH	nc|ENSG00000100033|O43272-2|PRODH	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.30078125	3	494.320672	1479.94019	-1.6335	-0.00080745	-2.0484	-0.0010126	-3.6818	-0.00182	494.3199167289042	97.25	0.67659	97.452	97.008	97.685	0.20207					19	15	2	0	0	0	0.18066	1	10022	10022		14.086	4.4399	1	318790			32633	1787	21518	21528	37253	37253					0.2194152163565377
LLWLGPGG	8	Unmodified	_LLWLGPGG_					0	0	0			REV__ENST00000367142.4_1_1:205693083-205719238:-|nuORF	REV__ENST00000367142.4_1_1:205693083-205719238:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24853515625	2	406.736889	811.459225	-1.1721	-0.00047672	0.44511	0.00018104	-0.72696	-0.00029568	406.7370818288024	88.651	0.92274	88.651	88.249	89.172	0					32	21	2	0	0	0	0.4196	1	8580	8580		16.705	8.4737	1	140600	+		32634	25552	21519	21529	37254	37254					0.04595336048248555
LLWLGVFL	8	Unmodified	_LLWLGVFL_					0	0	0		ENSG00000139985|ENST00000603540|ADAM21;ENST00000530196.1_1_14:70713981-70714470:-|nuORF	ENSG00000139985|ENST00000603540|ADAM21	ENSG00000139985|ENST00000603540|ADAM21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.8008117675781	2	480.799489	959.584425	2.0445	0.00098299	0.65431	0.00031459	2.6988	0.0012976	480.7997098356697	95.287	4.3541	95.23	94.639	98.993	-0.057526					326	101	5	0	0	0	0.84567	1	10556	10556		24.504	2.5441	1	19210000			32635	4406	21520	21530	37255	37255					0.1030162818460667
LLWLLLPGLIL	11	Unmodified	_LLWLLLPGLIL_					0	0	0			REV__ENSG00000281991|ENST00000615541|TMEM265	REV__ENSG00000281991|ENST00000615541|TMEM265	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	632.4183959960938	2	632.425585	1262.83662	2.8292	0.0017893	4.0853	0.0025837	6.9145	0.0043729	632.4278485771309	108.34	0.724	108.31	108	108.72	-0.031487					56	31	3	0	0	0	0.74035	1	12035	12035		24.203	0	1	2849900	+		32636	24048	21521	21531	37256	37256					0.2157122147532391
LLWLLLPGLIL	11	Unmodified	_LLWLLLPGLIL_					0	0	0			REV__ENSG00000281991|ENST00000615541|TMEM265	REV__ENSG00000281991|ENST00000615541|TMEM265	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	632.4268188476562	2	632.425585	1262.83662	6.039	0.0038192	0.78417	0.00049593	6.8232	0.0043152	632.4259296772835	108.39	0.23161	108.49	108.38	108.61	0.10307					25	11	3	0	0	0	0.83864	1	13230	13230		6.7355	0.81444	1	471730	+		32637	24048	21521	21531	37257	37257					0.2157122147532391
LLWLLLPGLIL	11	Unmodified	_LLWLLLPGLIL_					0	0	0			REV__ENSG00000281991|ENST00000615541|TMEM265	REV__ENSG00000281991|ENST00000615541|TMEM265	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	632.425585	1262.83662	2.1425	0.001355	3.6586	0.0023138	5.8012	0.0036688	632.4269822166115	108.42	0.33303	108.5	108.25	108.58	0.084457	0.10309	-0.0029355	NaN	24.203	30	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	553800	+		32638	24048	21521	21531							0.2157122147532391
LLWLLLPGLIL	11	Unmodified	_LLWLLLPGLIL_					0	0	0			REV__ENSG00000281991|ENST00000615541|TMEM265	REV__ENSG00000281991|ENST00000615541|TMEM265	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	632.425585	1262.83662	6.039	0.0038192	0.78417	0.00049593	6.8232	0.0043152	632.4259296772835	108.39	0.23161	108.49	108.38	108.61	0.10307	0.096609	-0.0065713	NaN	24.203	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	471730	+		32639	24048	21521	21531							0.2157122147532391
LLWLQLRLP	9	Unmodified	_LLWLQLRLP_					0	0	0		ENST00000537390.5_3_6:160209145-160210586:-|nuORF	ENST00000537390.5_3_6:160209145-160210586:-|nuORF	ENST00000537390.5_3_6:160209145-160210586:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3685913085938	2	576.368601	1150.72265	0.36118	0.00020817	0.9573	0.00055176	1.3185	0.00075993	576.3690085595338	39.41	1.5229	39.358	38.775	40.298	-0.052727					87	42	3	0	0	0	0.7932	1	2427	2427		18.324	0	1	289570			32640	13450	21522	21532	37258	37258					0.15331751433086538
LLWLQLRLP	9	Unmodified	_LLWLQLRLP_					0	0	0		ENST00000537390.5_3_6:160209145-160210586:-|nuORF	ENST00000537390.5_3_6:160209145-160210586:-|nuORF	ENST00000537390.5_3_6:160209145-160210586:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3696899414062	2	576.368601	1150.72265	-0.74314	-0.00042832	2.2532	0.0012986	1.51	0.00087033	576.3696767962949	37.867	1.5412	38.18	37.746	39.287	0.31312					100	38	4	0	0	0	0.7932	1	3058	3058		19.36	0.25645	1	2629900			32641	13450	21522	21532	37259	37259					0.15331751433086538
LLWLRENKK	9	Unmodified	_LLWLRENKK_					0	0	0			REV__ENST00000460960.1_1_3:136646843-136647104:+|nuORF	REV__ENST00000460960.1_1_3:136646843-136647104:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.58050537109375	3	400.580152	1198.71863	-1.7912	-0.00071753	2.8672	0.0011486	1.076	0.00043102	400.5810902225448	111.65	0.42501	111.76	111.55	111.97	0.11118					38	12	4	0	0	0	0.77244	1	12039	12039		32.812	0.77829	1	12328000	+		32642	16620	21523	21533	37260	37260					0.1272166193934936
LLWLSAARP	9	Unmodified	_LLWLSAARP_					0	0	0			REV__ENST00000416283.6_1_7:77428135-77428228:+|nuORF	REV__ENST00000416283.6_1_7:77428135-77428228:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8087158203125	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.7932	1	4495	4495		24.203	0	1	771120	+		32643	26434	21524	21534	37261	37261					0.0904234343945518
LLWLVPVFMIL	11	Unmodified	_LLWLVPVFMIL_					0	0	0			REV__ENST00000438934.5_2_22:18979246-18979498:+|nuORF	REV__ENST00000438934.5_2_22:18979246-18979498:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.6095275878906	3	448.610172	1342.80869	-0.12449	-5.5849E-05	-1.7295	-0.00077585	-1.854	-0.0008317	448.94365307156517	77.124	0.95989	77.076	76.709	77.669	-0.048264					104	45	3	0	0	0	0.75544	1	7679	7679		20.837	3.004	1	533170	+		32644	26727	21525	21535	37262	37262					0.1509957522359855
LLWLVPVFMIL	11	Unmodified	_LLWLVPVFMIL_					0	0	0			REV__ENST00000438934.5_2_22:18979246-18979498:+|nuORF	REV__ENST00000438934.5_2_22:18979246-18979498:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.94329833984375	3	448.610172	1342.80869	0.51937	0.00023299	-2.3198	-0.0010407	-1.8004	-0.00080767	448.6089579752084	75.063	1.1228	75.195	74.637	75.76	0.13208					79	31	3	0	0	0	0.68532	2	6986	6959;6986		33.922	9.6898	1	398900	+		32645	26727	21525	21535	37263;37264	37264					0.1509957522359855
LLWLVPVFMIL	11	Unmodified	_LLWLVPVFMIL_					0	0	0			REV__ENST00000438934.5_2_22:18979246-18979498:+|nuORF	REV__ENST00000438934.5_2_22:18979246-18979498:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	448.610172	1342.80869	-0.33073	-0.00014837	-1.4826	-0.00066509	-1.8133	-0.00081346	448.60926417433876	75.297	1.2081	75.251	74.823	76.031	-0.045982	-0.020012	-0.00039522	NaN	33.922	90	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	359860	+		32646	26727	21525	21535							0.1509957522359855
LLWLWCWV	8	Unmodified	_LLWLWCWV_					0	0	0			REV__ENST00000371117.7_1_6:51750749-51768419:-|nuORF	REV__ENST00000371117.7_1_6:51750749-51768419:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	559.6448974609375	2	559.796423	1117.57829	0.27122	0.00015183	2.4164	0.0013527	2.6876	0.0015045	559.7983432265996	37.727	0.13883	37.744	37.651	37.79	0.016563					5	4	2	0	0	0	0.4196	1	2174	2174		24.504	0	1	34621	+		32647	25679	21526	21536	37265	37265					0.024207866814322188
LLWPARAS	8	Unmodified	_LLWPARAS_					0	0	0		ENST00000292524.5_1_8:145747288-145748023:+|nuORF	ENST00000292524.5_1_8:145747288-145748023:+|nuORF	ENST00000292524.5_1_8:145747288-145748023:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2637939453125	2	457.266345	912.518136	-0.13162	-6.0186E-05	-4.207	-0.0019237	-4.3386	-0.0019839	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.87922	1	7764	7764		31.955	6.5047	1	1194000			32648	9687	21527	21537	37266	37266					0.05837812342554116
LLWPARAS	8	Unmodified	_LLWPARAS_					0	0	0		ENST00000292524.5_1_8:145747288-145748023:+|nuORF	ENST00000292524.5_1_8:145747288-145748023:+|nuORF	ENST00000292524.5_1_8:145747288-145748023:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.263916015625	2	457.266345	912.518136	-1.5615	-0.00071403	-2.9129	-0.001332	-4.4744	-0.002046	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.86288	2	7769	7769;7937		31.955	3.7006	1	4061400			32649	9687	21527	21537	37267;37268	37267					0.05837812342554116
LLWPAVGAR	9	Unmodified	_LLWPAVGAR_					0	0	0		ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;ENST00000591097.5_1_19:1271671-1272439:+|nuORF;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.795654296875	2	491.795269	981.575986	-0.75954	-0.00037354	1.5722	0.0007732	0.81265	0.00039966	491.7959244094971	46.601	1.9125	46.572	45.843	47.756	-0.028782					158	52	4	0	0	0	0.77546	1	3755	3755		31.955	5.1588	1	3015000			32650	1763	21528	21538	37269	37269					0.08446074267988024
LLWPRRRWLWR	11	Unmodified	_LLWPRRRWLWR_					0	0	0			REV__chr12:54282932-54283079|63|29.79|0.0|21.51|+|1|HNRNPA1,HNRNPA1|2	REV__chr12:54282932-54283079|63|29.79|0.0|21.51|+|1|HNRNPA1,HNRNPA1|2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	409.8011474609375	4	410.246752	1636.9579	-2.1643	-0.00088791	-2.2765	-0.00093391	-4.4408	-0.0018218	410.24580397790174	18.761	1.3049	18.761	18.466	19.771	0					88	49	3	0	0	0	0.18318	1	348	348		6.001	4.7691	1	65366	+		32651	15545	21529	21539	37270	37270					0.16490281681217311
LLWRLPAPV	9	Unmodified	_LLWRLPAPV_					0	0	0		ENST00000470209.5_1_X:153173185-153178999:-|nuORF;ENST00000404127.6_1_X:153173185-153186849:-|nuORF;ENSG00000089820|ENST00000350060|ARHGAP4;nc|ENSG00000089820|P98171-2|ARHGAP4;ENST00000494397.5_1_X:153175958-153178171:-|nuORF	ENST00000470209.5_1_X:153173185-153178999:-|nuORF	ENST00000470209.5_1_X:153173185-153178999:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.32275390625	2	532.834394	1063.65424	0.22151	0.00011803	1.0019	0.00053387	1.2235	0.0006519	532.8347364642794	46.655	0.41405	46.641	46.495	46.909	-0.013821					14	10	2	0	0	0	0.20789	1	3747	3747		19.36	1.0356	1	49410			32652	1633	21530	21540	37271	37271					0.12495506853201732
LLWRQRRRRWP	11	Unmodified	_LLWRQRRRRWP_					0	0	0		ENST00000264010.8_1_16:67596501-67605146:+|nuORF	ENST00000264010.8_1_16:67596501-67605146:+|nuORF	ENST00000264010.8_1_16:67596501-67605146:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2586364746094	4	406.49583	1621.95422	1.695	0.000689	4.4656	0.0018152	6.1606	0.0025042	406.74831955886253	57.259	0.62479	57.292	57.077	57.702	0.033184					26	22	2	0	0	0	0.18287	1	5245	5245		6.6596	3.0405	1	175100			32653	9472	21531	21541	37272	37272					0.16811611907314727
LLWRYIAKT	9	Unmodified	_LLWRYIAKT_					0	0	0			REV__ENSG00000119203|ENST00000238112|CPSF3	REV__ENSG00000119203|ENST00000238112|CPSF3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3508911132812	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.83	1	114.8	114.3	115.3	-0.02433								0	0	0	0.31828	1	12726	12726		24.203	4.8428	1		+		32654	18342	21532	21542	37273	37273					0.1114287453635825
LLWSLGPGP	9	Unmodified	_LLWSLGPGP_					0	0	0			REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.2680358886719	2	470.268553	938.522553	-0.5952	-0.00027991	0.70461	0.00033135	0.1094	5.1449E-05	470.26875072135346	74.151	2.0983	74.542	73.933	76.031	0.3911					119	51	3	0	0	0	0.67235	1	8362	8362		42.474	5.3154	1	1416400	+		32655	27802	21533	21543	37274	37274					0.050832767654810596
LLWTPRRLV	9	Unmodified	_LLWTPRRLV_					0	0	0		ENST00000587457.1_1_19:55741658-55741895:-|nuORF	ENST00000587457.1_1_19:55741658-55741895:-|nuORF	ENST00000587457.1_1_19:55741658-55741895:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.3660888671875	2	577.36385	1152.71315	3.0575	0.0017653	1.3884	0.0008016	4.4459	0.0025669	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.7932	1	11316	11316		17.365	0.64758	1	11111000			32656	14191	21534	21544	37275	37275					0.14289983147546081
LLWVPGCI	8	Unmodified	_LLWVPGCI_					0	0	0		ENST00000375754.8_1_9:93657936-93658308:+|nuORF	ENST00000375754.8_1_9:93657936-93658308:+|nuORF	ENST00000375754.8_1_9:93657936-93658308:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7547607421875	2	450.754224	899.493896	-1.264	-0.00056978	1.1883	0.00053562	-0.075782	-3.4159E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.88393	1	7743	7743		33.493	1.5381	1	414240			32657	10806	21535	21545	37276	37276					0.040128358646711604
LLWVSLIM	8	Unmodified	_LLWVSLIM_					0	0	0			REV__nc|ENSG00000148680|P34969-3|HTR7	REV__nc|ENSG00000148680|P34969-3|HTR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906799316406	2	487.790807	973.56706	-0.085473	-4.1693E-05	-0.2767	-0.00013497	-0.36217	-0.00017666	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.83466	2	8361	8327;8361		31.579	1.7373	1	1889700	+		32658	20130	21536	21546	37277;37278	37278					0.0792196458729677
LLWVSLIM	8	Unmodified	_LLWVSLIM_					0	0	0			REV__nc|ENSG00000148680|P34969-3|HTR7	REV__nc|ENSG00000148680|P34969-3|HTR7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7906799316406	2	487.790807	973.56706	0.64551	0.00031488	-1.031	-0.00050289	-0.38544	-0.00018801	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.90024	1	8236	8236		39.021	0	1	1929300	+		32659	20130	21536	21546	37279	37279					0.0792196458729677
LLWVVRGG	8	Unmodified	_LLWVVRGG_					0	0	0			REV__ENST00000532293.1_1_15:66586194-66586371:+|nuORF	REV__ENST00000532293.1_1_15:66586194-66586371:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.274658203125	2	450.276712	898.538872	-1.1013	-0.00049589	-3.9466	-0.0017771	-5.0479	-0.002273	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.86791	2	9329	9329;9390		29.842	2.6802	1	26247000	+		32660	28320	21537	21547	37280;37281	37280					0.08554402722234045
LLWVVRGG	8	Unmodified	_LLWVVRGG_					0	0	0			REV__ENST00000532293.1_1_15:66586194-66586371:+|nuORF	REV__ENST00000532293.1_1_15:66586194-66586371:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2745361328125	2	450.276712	898.538872	-1.2506	-0.00056311	-3.9386	-0.0017735	-5.1892	-0.0023366	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.90024	1	9558	9558		39.021	3.4032	1	44812000	+		32661	28320	21537	21547	37282	37282					0.08554402722234045
LLWVVRGG	8	Unmodified	_LLWVVRGG_					0	0	0			REV__ENST00000532293.1_1_15:66586194-66586371:+|nuORF	REV__ENST00000532293.1_1_15:66586194-66586371:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.273193359375	2	450.276712	898.538872	0.75395	0.00033949	-3.9688	-0.001787	-3.2148	-0.0014476	450.2743193877382	102.15	1.1801	102.29	101.8	102.98	0.13523					55	28	3	0	0	0	0.87276	1	10736	10736		29.842	4.3914	1	357030	+		32662	28320	21537	21547	37283	37283					0.08554402722234045
LLWVVRGG	8	Unmodified	_LLWVVRGG_					0	0	0			REV__ENST00000532293.1_1_15:66586194-66586371:+|nuORF	REV__ENST00000532293.1_1_15:66586194-66586371:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2743225097656	2	450.276712	898.538872	-1.7763	-0.00079984	-3.3706	-0.0015177	-5.147	-0.0023176	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.87276	1	9616	9616		29.842	6.7991	1	35178000	+		32663	28320	21537	21547	37284	37284					0.08554402722234045
LLWVVRGG	8	Unmodified	_LLWVVRGG_					0	0	0			REV__ENST00000532293.1_1_15:66586194-66586371:+|nuORF	REV__ENST00000532293.1_1_15:66586194-66586371:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2738037109375	2	450.276712	898.538872	-1.7762	-0.00079979	-2.6214	-0.0011804	-4.3976	-0.0019801	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.80963	2	12161	12161;12376		23.037	2.5549	1	2494900	+		32664	28320	21537	21547	37285;37286	37285					0.08554402722234045
LLYGHTVTV	9	Unmodified	_LLYGHTVTV_					0	0	0		nc|ENSG00000157593|Q8TB61-3|SLC35B2;ENSG00000157593|ENST00000393812|SLC35B2;nc|ENSG00000157593|Q8TB61-5|SLC35B2;nc|ENSG00000157593|Q8TB61-4|SLC35B2;nc|ENSG00000157593|Q8TB61-2|SLC35B2	nc|ENSG00000157593|Q8TB61-3|SLC35B2	nc|ENSG00000157593|Q8TB61-3|SLC35B2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.7859191894531	2	501.784567	1001.55458	-0.99387	-0.00049871	-0.71226	-0.0003574	-1.7061	-0.00085611	501.7838884691197	44.167	0.73246	44.618	44.2	44.932	0.45025					39	17	3	0	0	0	0.28875	1	4049	4049		65.803	16.362	1	805630			32665	5440	21538	21548	37287	37287					0.05386644448617517
LLYGHTVTV	9	Unmodified	_LLYGHTVTV_					0	0	0		nc|ENSG00000157593|Q8TB61-3|SLC35B2;ENSG00000157593|ENST00000393812|SLC35B2;nc|ENSG00000157593|Q8TB61-5|SLC35B2;nc|ENSG00000157593|Q8TB61-4|SLC35B2;nc|ENSG00000157593|Q8TB61-2|SLC35B2	nc|ENSG00000157593|Q8TB61-3|SLC35B2	nc|ENSG00000157593|Q8TB61-3|SLC35B2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.7851867675781	2	501.784567	1001.55458	-1.1414	-0.00057274	-0.8667	-0.0004349	-2.0081	-0.0010076	501.7840371973041	43.938	0.61261	44.712	44.384	44.996	0.77379					34	14	3	0	0	0	0.39977	1	4001	4001		57.811	4.4598	1	812630			32666	5440	21538	21548	37288	37288					0.05386644448617517
LLYGIVGV	8	Unmodified	_LLYGIVGV_					0	0	0		L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|48|2|sense	L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|48|2|sense	L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|48|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2583923339844	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.84567	1	540	540		24.504	5.144	1	817900			32667	14563	21539	21549	37289	37289					0.08288775879532295
LLYGLKQSFIK	11	Unmodified	_LLYGLKQSFIK_					0	0	0			REV__ENSG00000173020|ENST00000308595|GRK2	REV__ENSG00000173020|ENST00000308595|GRK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2676696777344	3	437.267463	1308.78056	-0.68964	-0.00030156	1.4499	0.00063399	0.76026	0.00033244	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.78683	1	4933	4933		14.086	0.57807	1	2651700	+		32668	21880	21540	21550	37290	37290					0.1385196856786024
LLYIGVKII	9	Unmodified	_LLYIGVKII_					0	0	0			REV__nc|ENSG00000146414|Q149N8-4|SHPRH	REV__nc|ENSG00000146414|Q149N8-4|SHPRH	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.346803	1030.67905	-0.68466	-0.00035352	3.1635	0.0016335	2.4788	0.0012799	516.3484948097502	99.516	0.45558	99.516	99.262	99.717	0					20	10	3	0	0	0	0.20789	1	10030	10030		12.959	0	1	147870	+		32669	20015	21541	21551	37291	37291					0.16494141935959306
LLYIPVVYL	9	Unmodified	_LLYIPVVYL_					0	0	0			REV__nc|ENSG00000157600|Q5U3C3-2|TMEM164	REV__nc|ENSG00000157600|Q5U3C3-2|TMEM164	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8397827148438	2	546.838811	1091.66307	-0.41161	-0.00022509	1.9321	0.0010565	1.5204	0.00083144	546.8400747085221	101.16	3.89	101.19	100.52	104.41	0.031036					283	93	6	0	0	0	0.78292	1	10875	10875		29.842	0.69198	1	40007000	+		32670	20553	21542	21552	37292	37292					0.12090435699042246
LLYIRDALI	9	Unmodified	_LLYIRDALI_					0	0	0		nc|ENSG00000131374|Q92609|TBC1D5;ENSG00000131374|ENST00000696125|TBC1D5	nc|ENSG00000131374|Q92609|TBC1D5	nc|ENSG00000131374|Q92609|TBC1D5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.3172607421875	2	545.336967	1088.65938	0.76165	0.00041536	-2.3485	-0.0012807	-1.5869	-0.00086538	545.3353366324687	91.335	0.16406	91.491	91.389	91.553	0.15614					6	3	2	0	0	0	0.20789	1	9205	9205		17.365	0	1	56588			32671	3725	21543	21553	37293	37293					0.11859765925169086
LLYIRKIL	8	Unmodified	_LLYIRKIL_					0	0	0			REV__nc|ENSG00000186684|Q4G0S4|CYP27C1	REV__nc|ENSG00000186684|Q4G0S4|CYP27C1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3137817382812	2	516.35242	1030.69029	-0.2584	-0.00013342	-3.2084	-0.0016566	-3.4667	-0.0017901	516.3512332298329	98.924	0.11969	99.146	99.088	99.208	0.22262					6	2	3	0	0	0	0.4196	1	10276	10276		4.3163	0	1	209780	+		32672	22875	21544	21554	37294	37294					0.17616964030071358
LLYLGAAI	8	Unmodified	_LLYLGAAI_					0	0	0			REV__ENST00000552176.2_17:6916945-6917602:+|nuORF	REV__ENST00000552176.2_17:6916945-6917602:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.25848388671875	2	417.260197	832.50584	-0.38397	-0.00016022	-3.5679	-0.0014888	-3.9519	-0.001649	417.2585749889359	22.175	2.752	22.117	21.499	24.251	-0.05867					139	87	2	0	0	0	0.84567	1	717	717		24.504	2.8017	1	87379	+		32673	23701	21545	21555	37295	37295					0.08288775879520927
LLYLGKLKDS	10	Unmodified	_LLYLGKLKDS_					0	0	0		ENSG00000171853|ENST00000324266|TRAPPC12;ENST00000493792.1_1_2:3482527-3483229:+|nuORF	ENSG00000171853|ENST00000324266|TRAPPC12	ENSG00000171853|ENST00000324266|TRAPPC12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.3453369140625	2	575.347532	1148.68051	0.97571	0.00056137	-4.2468	-0.0024434	-3.2711	-0.001882	575.3449806461122	98.555	2.3295	98.603	98.055	100.38	0.048157					165	53	5	0	0	0	0.86589	1	10585	10585		29.15	1.0681	1	4316200			32674	6719	21546	21556	37296	37296					0.11211731234061517
LLYLKKRRW	9	Unmodified	_LLYLKKRRW_					0	0	0			REV__ENSG00000132429|ENST00000254765|POPDC3	REV__ENSG00000132429|ENST00000254765|POPDC3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2455139160156	3	425.939792	1274.79755	2.6359	0.0011227	3.6098	0.0015376	6.2458	0.0026603	426.2752578111949	88.028	1.0549	88.081	87.342	88.396	0.053024					33	24	2	0	0	0	0.20789	1	9033	9033		26.693	8.1619	1	50495	+		32675	19003	21547	21557	37297	37297					0.1711393396431049
LLYLPFTLI	9	Unmodified	_LLYLPFTLI_					0	0	0			REV__ENSG00000185432|ENST00000332160|METTL7A	REV__ENSG00000185432|ENST00000332160|METTL7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.840576171875	2	546.838811	1091.66307	0.84844	0.00046396	0.94515	0.00051684	1.7936	0.0009808	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.7932	1	10721	10721		25.45	3.7478	1	43597000	+		32676	22764	21548	21558	37298	37298					0.12090435699042246
LLYLTAGT	8	Unmodified	_LLYLTAGT_					0	0	0			REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	426.24591064453125	2	426.247286	850.48002	-1.1835	-0.00050446	-1.6997	-0.0007245	-2.8832	-0.001229	426.24646575286147	87.846	4.0837	87.846	85.783	89.866	0					184	94	2	0	0	0	0.87276	2	8430	8430;8467		37.028	0	1	2605100	+		32677	23057	21549	21559	37299;37300	37299					0.04879881637236849
LLYLTAGT	8	Unmodified	_LLYLTAGT_					0	0	0			REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2459411621094	2	426.247286	850.48002	-0.1821	-7.7619E-05	-2.626	-0.0011193	-2.8081	-0.0011969	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.86288	1	8860	8860		26.796	0	1	3805200	+		32678	23057	21549	21559	37301	37301					0.04879881637236849
LLYLTAGT	8	Unmodified	_LLYLTAGT_					0	0	0			REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.24591064453125	2	426.247286	850.48002	-1.7038	-0.00072625	-1.2223	-0.00052102	-2.9262	-0.0012473	426.246697883185	87.448	3.9173	87.649	85.72	89.637	0.20114					165	92	2	0	0	0	0.82464	1	8610	8610		21.702	0	1	4015800	+		32679	23057	21549	21559	37302	37302					0.04879881637236849
LLYLTAGT	8	Unmodified	_LLYLTAGT_					0	0	0			REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.24591064453125	2	426.247286	850.48002	0.61593	0.00026254	-3.4632	-0.0014762	-2.8473	-0.0012137	426.24572360202285	87.518	4.0945	87.668	85.602	89.696	0.14956					180	96	4	0	0	0	0.91005	1	8678	8678		42.474	0	1	3688500	+		32680	23057	21549	21559	37303	37303					0.04879881637236849
LLYLTAGT	8	Unmodified	_LLYLTAGT_					0	0	0			REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.2454833984375	2	426.247286	850.48002	-1.843	-0.00078557	-1.0037	-0.00042784	-2.8467	-0.0012134	426.2467741737408	87.495	4.0009	87.665	85.686	89.687	0.16922					180	93	4	0	0	0	0.86791	2	8563	8563;8607		28.254	0	1	3180100	+		32681	23057	21549	21559	37304;37305	37304					0.04879881637236849
LLYLTAGT	8	Unmodified	_LLYLTAGT_					0	0	0			REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	REV__ENST00000486007.1_1_7:10977674-10979684:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.24542236328125	2	426.247286	850.48002	0.55578	0.0002369	-3.442	-0.0014671	-2.8862	-0.0012302	426.24575751127946	87.37	3.4516	87.816	85.746	89.198	0.44628					161	83	2	0	0	0	0.91005	1	10255	10255		42.474	0	1	2779100	+		32682	23057	21549	21559	37306	37306					0.04879881637236849
LLYLTTTN	8	Unmodified	_LLYLTTTN_					0	0	0		nc|ENSG00000147231|Q6NSI4-4|RADX;ENSG00000147231|ENST00000372548|RADX;nc|ENSG00000147231|Q6NSI4-3|RADX;nc|ENSG00000147231|Q6NSI4-2|RADX	nc|ENSG00000147231|Q6NSI4-4|RADX	nc|ENSG00000147231|Q6NSI4-4|RADX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7611083984375	2	469.7633	937.512048	-1.0651	-0.00050035	-2.9191	-0.0013713	-3.9842	-0.0018716	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.89494	1	2017	2017		37.159	1.5408	1	219920			32683	4889	21550	21560	37307	37307					0.04079249320375311
LLYLVLELLY	10	Unmodified	_LLYLVLELLY_					0	0	0			REV__nc|ENSG00000114626|Q969K4-4|ABTB1	REV__nc|ENSG00000114626|Q969K4-4|ABTB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.390380859375	2	626.383583	1250.75261	2.3128	0.0014487	1.2562	0.00078684	3.569	0.0022355	626.8860681580434	110.01	1.5052	110.06	109.66	111.17	0.054062					106	56	2	0	0	0	0.86047	1	13404	13404		7.1934	0	1	1083000	+		32684	29791	21551	21561	37308	37308					0.13726645587757957
LLYNRLFLGR	10	Unmodified	_LLYNRLFLGR_					0	0	0			REV__ENST00000563400.1_1_16:34326999-34329423:+|nuORF	REV__ENST00000563400.1_1_16:34326999-34329423:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.9163513183594	3	422.255669	1263.74518	2.994	0.0012642	2.3263	0.00098231	5.3203	0.0022465	422.59089528464386	98.029	0.61541	98.077	97.75	98.365	0.048157					13	13	2	0	0	0	0.37624	1	10441	10441		15.333	1.8252	1	22944	+		32685	16580	21552	21562	37309	37309					0.12385350830686548
LLYPNPGP	8	Unmodified	_LLYPNPGP_					0	0	0			REV__ENST00000405142.1_1_16:4744898-4745177:+|nuORF	REV__ENST00000405142.1_1_16:4744898-4745177:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.18682861328125	2	435.739628	869.464704	4.7645	0.0020761	0.15161	6.6063E-05	4.9161	0.0021421	435.7397447061704	107	0.53634	107.15	106.9	107.43	0.14929					20	15	2	0	0	0	0.4196	1	13052	13052		37.028	10.232	1	252450	+		32686	26285	21553	21563	37310	37310					0.024750148400471517
LLYPPIAN	8	Unmodified	_LLYPPIAN_					0	0	0			REV__L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|51|3|sense	REV__L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|51|3|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2742614746094	2	450.763104	899.511654	-1.7747	-0.00079997	-3.1352	-0.0014132	-4.9099	-0.0022132	450.76166375229235	92.895	0.49641	93.088	92.692	93.188	0.19239					15	11	2	0	0	0	0.4196	1	9357	9357		28.254	0	1	102150	+		32687	29627	21554	21564	37311	37311					0.057878743911942365
LLYPYSYK	8	Unmodified	_LLYPYSYK_					0	0	0		ENSG00000165078|ENST00000297770|CPA6	ENSG00000165078|ENST00000297770|CPA6	ENSG00000165078|ENST00000297770|CPA6	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.781493	1045.54843	-0.77784	-0.00040742	4.4087	0.0023092	3.6309	0.0019018	523.783847577468	90.108	2.0835	90.108	89.301	91.384	0					83	48	2	0	0	0	0.4196	1	8706	8706		25.45	8.0852	1	98297			32688	6042	21555	21565	37312	37312					0.027481262170795162
LLYRHKNN	8	Unmodified	_LLYRHKNN_					0	0	0			REV__ENSG00000054523|ENST00000676179|KIF1B	REV__ENSG00000054523|ENST00000676179|KIF1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7606201171875	2	529.298707	1056.58286	0.92205	0.00048804	-3.7704	-0.0019956	-2.8483	-0.0015076	529.2976444302535	50.12	0.20375	50.965	50.851	51.055	0.84501					6	4	2	0	0	0	0.4196	1	4943	4943		37.028	0	1	129500	+		32689	16402	21556	21566	37313	37313					0.05683387148565089
LLYRLHAP	8	Unmodified	_LLYRLHAP_					0	0	0			REV__nc|ENSG00000183307|Q9BXQ6-2|TMEM121B	REV__nc|ENSG00000183307|Q9BXQ6-2|TMEM121B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958068847656	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.86791	1	3888	3888		28.254	2.8041	1	1502200	+		32690	22595	21557	21567	37314	37314					0.08446074267988024
LLYRRRSA	8	Unmodified	_LLYRRRSA_					0	0	0			REV__nc|ENSG00000186866|Q9Y2G5-2|POFUT2	REV__nc|ENSG00000186866|Q9Y2G5-2|POFUT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.8154296875	2	517.814525	1033.6145	-0.12754	-6.6044E-05	2.4231	0.0012547	2.2956	0.0011887	517.8157100112877	52.635	0.62202	53.249	52.95	53.572	0.61436					26	14	2	0	0	0	0.79403	1	5299	5299		63.306	13.77	1	923420	+		32691	22885	21558	21568	37315	37315					0.09903379902516463
LLYRRRSA	8	Unmodified	_LLYRRRSA_					0	0	0			REV__nc|ENSG00000186866|Q9Y2G5-2|POFUT2	REV__nc|ENSG00000186866|Q9Y2G5-2|POFUT2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	517.814525	1033.6145	0.35038	0.00018143	2.086	0.0010802	2.4364	0.0012616	517.8155438792537	52.856	0.74222	53.28	53.012	53.754	0.42348	0.015136	-0.00014431	NaN	63.306	32	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	937610	+		32692	22885	21558	21568							0.09903379902516463
LLYRRRSA	8	Unmodified	_LLYRRRSA_					0	0	0			REV__nc|ENSG00000186866|Q9Y2G5-2|POFUT2	REV__nc|ENSG00000186866|Q9Y2G5-2|POFUT2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	517.814525	1033.6145	-0.12754	-6.6044E-05	2.4231	0.0012547	2.2956	0.0011887	517.8157100112877	52.635	0.62202	53.249	52.95	53.572	0.61436	-0.015136	0.00020484	NaN	63.306	26	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	923420	+		32693	22885	21558	21568							0.09903379902516463
LLYRRSRSL	9	Unmodified	_LLYRRSRSL_					0	0	0		ENSG00000129515|ENST00000362031|SNX6;nc|ENSG00000129515|Q9UNH7-2|SNX6;ENST00000556162.5_1_14:35032330-35073396:-|nuORF	ENSG00000129515|ENST00000362031|SNX6	ENSG00000129515|ENST00000362031|SNX6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3531494140625	2	582.354014	1162.69348	2.7406	0.001596	-3.1524	-0.0018358	-0.4118	-0.00023981	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.71772	1	12694	12694		39.253	0.44669	1	7862700			32694	3592	21559	21569	37316	37316					0.11863607136797327
LLYSGCRLTL	10	Unmodified	_LLYSGCRLTL_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.8204345703125	2	569.818084	1137.62162	-1.0016	-0.00057072	-0.6292	-0.00035853	-1.6308	-0.00092924	569.8176061903462	58.45	1.0406	58.45	57.91	58.951	0					67	44	2	0	0	0	0.80179	1	5044	5044		39.253	0.49923	1	76918			32695	7373	21560	21570	37317	37317					0.05830931668060657
LLYVCGFL	8	Unmodified	_LLYVCGFL_					0	0	0			REV__ENST00000451963.1_2_7:99818153-99818871:+|nuORF	REV__ENST00000451963.1_2_7:99818153-99818871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.25360107421875	2	464.254057	926.493561	0.086658	4.0231E-05	-0.17606	-8.1738E-05	-0.089404	-4.1506E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.88393	1	8575	8575		33.493	1.9632	1	1673200	+		32696	23615	21561	21571	37318	37318					0.02737416144816507
LLYYMPSH	8	Unmodified	_LLYYMPSH_					0	0	0			REV__ENSG00000280094|ENST00000623530|OR1B1	REV__ENSG00000280094|ENST00000623530|OR1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.253662109375	2	512.252046	1022.48954	0.39694	0.00020333	3.1526	0.0016149	3.5496	0.0018183	512.2534945513374	54.386	1.4462	54.467	54.003	55.449	0.081524					65	38	3	0	0	0	0.89457	1	4491	4491		37.028	0	1	633090	+		32697	24045	21562	21572	37319	37319					-0.020806733488825557
LLYYMPSH	8	Unmodified	_LLYYMPSH_					0	0	0			REV__ENSG00000280094|ENST00000623530|OR1B1	REV__ENSG00000280094|ENST00000623530|OR1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2533569335938	2	512.252046	1022.48954	-0.38169	-0.00019552	3.7923	0.0019426	3.4106	0.0017471	512.2538769688313	54.312	1.3388	54.263	53.816	55.154	-0.049274					65	39	2	0	0	0	0.89457	1	4460	4460		37.028	2.8559	1	691410	+		32698	24045	21562	21572	37320	37320					-0.020806733488825557
LMAAFFALAAL	11	Unmodified	_LMAAFFALAAL_					0	0	0		nc|ENSG00000187824|Q6QAJ8-2|TMEM220;ENSG00000187824|ENST00000341871|TMEM220	nc|ENSG00000187824|Q6QAJ8-2|TMEM220	nc|ENSG00000187824|Q6QAJ8-2|TMEM220	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.3143310546875	2	569.820095	1137.62564	-1.1368	-0.00064776	-4.3638	-0.0024866	-5.5006	-0.0031343	569.8176409056935	58.142	1.0174	58.129	57.613	58.631	-0.013641					37	33	2	0	0	0	0.69735	1	5301	5301		31.955	0	1	62807			32699	7886	21563	21573	37321	37321					0.06233021161756369
LMAGKRTG	8	Unmodified	_LMAGKRTG_					0	0	0		ENST00000524856.1_1_11:65374036-65375591:-|nuORF	ENST00000524856.1_1_11:65374036-65375591:-|nuORF	ENST00000524856.1_1_11:65374036-65375591:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.239501953125	2	417.23673	832.458907	3.0856	0.0012874	3.1331	0.0013073	6.2187	0.0025947	417.2376917787685	88.314	2.8848	88.365	87.296	90.181	0.050415					161	67	3	0	0	0	0.82464	1	9068	9068		21.702	2.3424	1	1607200			32700	13227	21564	21574	37322	37322					0.03597593056736059
LMAKALGS	8	Oxidation (M)	_LM(Oxidation (M))AKALGS_		LM(1)AKALGS		LM(44)AKALGS	0	0	1			REV__nc|ENSG00000139971|Q86TY3-2|ARMH4	REV__nc|ENSG00000139971|Q86TY3-2|ARMH4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.7242736816406	2	403.725664	805.436775	-1.8572	-0.00074981	-2.029	-0.00081914	-3.8862	-0.0015689	403.7247227583041	64.772	1.8283	64.897	63.712	65.54	0.12545					133	73	3	0	0	0	0.91472	1	5775	5775		44.117	6.9577	1	1035700	+		32701	19584	21565	21575	37323	37323		290			0.02627368588309764
LMAKVPVSL	9	Unmodified	_LMAKVPVSL_					0	0	0			REV__ENSG00000132549|ENST00000357162|VPS13B	REV__ENSG00000132549|ENST00000357162|VPS13B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27740478515625	2	479.293714	956.572874	-0.098405	-4.7165E-05	1.15	0.00055119	1.0516	0.00050402	479.29380640803447	85.063	0.56892	85.13	84.897	85.466	0.067169					20	12	2	0	0	0	0.20789	1	8499	8499		16.473	0	1	41323	+		32702	19011	21566	21576	37324	37324					0.09285063098980118
LMAKVPVSL	9	Unmodified	_LMAKVPVSL_					0	0	0			REV__ENSG00000132549|ENST00000357162|VPS13B	REV__ENSG00000132549|ENST00000357162|VPS13B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27740478515625	2	479.293714	956.572874	0.16135	7.7332E-05	1.152	0.00055214	1.3133	0.00062947	479.2954649585907	83.872	0.21098	84.308	84.13	84.341	0.43538					7	4	2	0	0	0	0.20789	1	9727	9727		7.1934	0	1	42640	+		32703	19011	21566	21576	37325	37325					0.09285063098980118
LMARRDGPS	9	Unmodified	_LMARRDGPS_					0	0	0			REV__ENST00000319394.7_1_1:27633971-27634208:+|nuORF	REV__ENST00000319394.7_1_1:27633971-27634208:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.7560729980469	2	501.761101	1001.50765	-2.8009	-0.0014054	-4.1347	-0.0020746	-6.9355	-0.00348	501.7589241846743	41.179	0.7187	41.571	41.307	42.026	0.39209					46	19	4	0	0	0	0.17307	1	3567	3567		79.451	4.4077	1	6623000	+		32704	24987	21567	21577	37326	37326					0.006954616258326496
LMASGSNNAVI	11	Unmodified	_LMASGSNNAVI_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.7733154296875	2	538.773874	1075.53319	-1.2342	-0.00066496	0.58789	0.00031674	-0.64632	-0.00034822	538.7739230008748	47.443	0.62655	47.914	47.607	48.233	0.47139					35	15	3	0	0	0	0.1837	1	4501	4501		80.455	9.0767	1	2358300			32705	1487	21568	21578	37327	37327					-0.0015510864241150557
LMAVKRPPA	9	Unmodified	_LMAVKRPPA_					0	0	0		ENST00000306357.8_1_17:9153808-9153898:-|nuORF	ENST00000306357.8_1_17:9153808-9153898:-|nuORF	ENST00000306357.8_1_17:9153808-9153898:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7960205078125	2	491.796955	981.579357	-1.5825	-0.00077825	-0.95414	-0.00046924	-2.5366	-0.0012475	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.7932	1	3461	3461		19.36	0	1	2891800			32706	9859	21569	21579	37328	37328					0.08783001050346684
LMAVKRPPA	9	Unmodified	_LMAVKRPPA_					0	0	0		ENST00000306357.8_1_17:9153808-9153898:-|nuORF	ENST00000306357.8_1_17:9153808-9153898:-|nuORF	ENST00000306357.8_1_17:9153808-9153898:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7959899902344	2	491.796955	981.579357	-0.67834	-0.0003336	-1.8005	-0.00088548	-2.4788	-0.0012191	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.7932	1	4250	4250		25.45	4.9683	1	1111900			32707	9859	21569	21579	37329	37329					0.08783001050346684
LMAVKRPPA	9	Unmodified	_LMAVKRPPA_					0	0	0		ENST00000306357.8_1_17:9153808-9153898:-|nuORF	ENST00000306357.8_1_17:9153808-9153898:-|nuORF	ENST00000306357.8_1_17:9153808-9153898:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.2991943359375	2	491.796955	981.579357	-0.53143	-0.00026136	-1.5236	-0.00074929	-2.055	-0.0010106	491.79619139735206	56.69	1.2684	56.664	56.294	57.562	-0.026108					93	62	2	0	0	0	0.7932	1	4767	4767		24.203	1.166	1	1036100			32708	9859	21569	21579	37330	37330					0.08783001050346684
LMAVKRPPA	9	Unmodified	_LMAVKRPPA_					0	0	0		ENST00000306357.8_1_17:9153808-9153898:-|nuORF	ENST00000306357.8_1_17:9153808-9153898:-|nuORF	ENST00000306357.8_1_17:9153808-9153898:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958068847656	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.949	1	61.964	61.464	62.464	0.015724								0	0	0	0.33301	1	5393	5393		19.36	1.0356	1				32709	9859	21569	21579	37331	37331					0.08783001050346684
LMAVKRPPA	9	Unmodified	_LMAVKRPPA_					0	0	0		ENST00000306357.8_1_17:9153808-9153898:-|nuORF	ENST00000306357.8_1_17:9153808-9153898:-|nuORF	ENST00000306357.8_1_17:9153808-9153898:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7957763671875	2	491.796955	981.579357	-1.1725	-0.00057664	-1.389	-0.00068311	-2.5615	-0.0012597	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.76402	1	4327	4327		35.201	6.9464	1	3001500			32710	9859	21569	21579	37332	37332					0.08783001050346684
LMAVLAVIGG	10	Unmodified	_LMAVLAVIGG_					0	0	0		ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28759765625	2	472.285889	942.557224	-0.108	-5.1006E-05	3.8671	0.0018264	3.7591	0.0017754	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.86786	1	10216	10216		26.796	1.3459	1	46909000			32711	3560	21570	21580	37333	37333					0.0836477658193644
LMAVLAVIGG	10	Unmodified	_LMAVLAVIGG_					0	0	0		ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.287841796875	2	472.285889	942.557224	0.72641	0.00034307	3.0865	0.0014577	3.8129	0.0018008	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.85976	1	9989	9989		35.201	8.4046	1	48696000			32712	3560	21570	21580	37334	37334					0.0836477658193644
LMAVLLIAN	9	Unmodified	_LMAVLLIAN_					0	0	0			REV__ENSG00000099999|ENST00000382363|RNF215	REV__ENSG00000099999|ENST00000382363|RNF215	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2800598144531	2	479.293714	956.572874	0.27021	0.00012951	-2.3067	-0.0011056	-2.0365	-0.0009761	479.2923454365637	84.484	0.2036	84.919	84.859	85.063	0.43538					6	4	2	0	0	0	0.20789	1	9836	9836		26.796	3.7536	1	50894	+		32713	17124	21571	21581	37335	37335					0.09285063098980118
LMAVLLKTL	9	Unmodified	_LMAVLLKTL_					0	0	0			REV__nc|ENSG00000144935|P48995-2|TRPC1	REV__nc|ENSG00000144935|P48995-2|TRPC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904968261719	2	501.325014	1000.63547	0.67752	0.00033966	-0.38154	-0.00019128	0.29597	0.00014838	501.3243052501541	86.528	0.84759	86.677	86.36	87.207	0.14902					23	19	2	0	0	0	0.20789	1	8522	8522		20.947	0	1	47425	+		32714	19919	21572	21582	37336	37336					0.1351820916718225
LMCCEFCAKVF	11	Unmodified	_LMCCEFCAKVF_					0	0	0		nc|ENSG00000183621|Q7Z4V0-3|ZNF438;nc|ENSG00000183621|Q7Z4V0-2|ZNF438;ENSG00000183621|ENST00000436087|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	647.2803955078125	2	647.278566	1292.54258	-1.0404	-0.00067345	3.6887	0.0023876	2.6482	0.0017141	647.2810878546856	58.803	1.0008	59.195	58.651	59.652	0.39209					69	23	4	0	0	0	0.70737	1	6186	6186		30.318	2.2362	1	2569500			32715	7546	21573	21583	37337	37337					-0.09199122944437477
LMCSILPLV	9	Unmodified	_LMCSILPLV_					0	0	0		ENST00000457952.5_1_2:70417673-70417739:-|nuORF;ENST00000417203.5_2_2:70409910-70417739:-|nuORF	ENST00000457952.5_1_2:70417673-70417739:-|nuORF	ENST00000457952.5_1_2:70417673-70417739:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.77978515625	2	494.782124	987.549696	-1.5759	-0.00077971	-1.8749	-0.00092766	-3.4507	-0.0017074	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.76402	1	8299	8299		35.201	1.6851	1	569520			32716	11408	21574	21584	37338	37338					0.05542300989998239
LMCYMVLPIQ	10	Unmodified	_LMCYMVLPIQ_					0	0	0		ENST00000519493.1_1_8:19690706-19694700:+|nuORF;ENSG00000104613|ENST00000397977|INTS10	ENST00000519493.1_1_8:19690706-19694700:+|nuORF	ENST00000519493.1_1_8:19690706-19694700:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.80322265625	2	605.805274	1209.59599	0.26797	0.00016234	-2.1495	-0.0013022	-1.8815	-0.0011398	605.8037042070808	56.302	1.0201	56.699	56.394	57.414	0.39672					62	25	4	0	0	0	0.85934	1	5798	5798		35.618	1.4457	1	2984400			32717	2138	21575	21585	37339	37339					-0.00042002170221167034
LMDIVWARGR	10	Unmodified	_LMDIVWARGR_					0	0	0		ENST00000582778.1_2_17:73282834-73284610:-|nuORF;ENST00000402418.7_1_17:73282834-73282918:-|nuORF	ENST00000582778.1_2_17:73282834-73284610:-|nuORF	ENST00000582778.1_2_17:73282834-73284610:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.8366088867188	2	608.8346	1215.65465	-0.1449	-8.8218E-05	4.3661	0.0026583	4.2212	0.00257	608.8371154069557	110.53	1.2053	110.53	110.28	111.48	0					111	36	5	0	0	0	0.85934	1	11517	11517		35.618	6.4482	1	1502000			32718	11243	21576	21586	37340	37340					0.05544558510746356
LMDLLHEEL	9	Unmodified	_LMDLLHEEL_					0	0	0		ENSG00000077254|ENST00000370794|USP33;nc|ENSG00000077254|Q8TEY7|USP33;nc|ENSG00000077254|Q8TEY7-3|USP33	ENSG00000077254|ENST00000370794|USP33	ENSG00000077254|ENST00000370794|USP33	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.30322265625	2	556.78645	1111.55835	-1.3672	-0.00076124	-2.9135	-0.0016222	-4.2807	-0.0023834	556.7847014712999	44.161	0.5225	45.005	44.778	45.3	0.84438					24	12	3	0	0	0	0.20789	1	4087	4087		18.324	0	1	665290			32719	1377	21577	21587	37341	37341					0.007029461601632647
LMDTVKKVL	9	Unmodified	_LMDTVKKVL_					0	0	0		ENSG00000162419|ENST00000373816|GMEB1;nc|ENSG00000162419|Q9Y692|GMEB1	ENSG00000162419|ENST00000373816|GMEB1	ENSG00000162419|ENST00000373816|GMEB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.821044921875	2	523.817553	1045.62055	2.8449	0.0014902	2.6409	0.0013834	5.4858	0.0028736	523.8189575554507	102.28	1.3667	102.58	101.57	102.94	0.29865					61	33	2	0	0	0	0.7932	2	12375	12375;12393		23.042	4.7181	1	366070			32720	5687	21578	21588	37342;37343	37342					0.09956717299155571
LMDVFAVRVK	10	Unmodified	_LMDVFAVRVK_					0	0	0			REV__ENSG00000146918|ENST00000356309|NCAPG2	REV__ENSG00000146918|ENST00000356309|NCAPG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3428955078125	2	589.341726	1176.6689	0.82336	0.00048524	1.2532	0.00073856	2.0765	0.0012238	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.86718	1	11091	11091		27.882	0.83493	1	9460500	+		32721	20042	21579	21589	37344	37344					0.08763210939059718
LMEENSKLEA	10	Unmodified	_LMEENSKLEA_					0	0	0		nc|ENSG00000173805|P54257-3|HAP1;nc|ENSG00000173805|P54257-4|HAP1;ENSG00000173805|ENST00000347901|HAP1;nc|ENSG00000173805|P54257|HAP1	nc|ENSG00000173805|P54257-3|HAP1	nc|ENSG00000173805|P54257-3|HAP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3538208007812	2	582.284271	1162.55399	0.88296	0.00051413	0.1099	6.399E-05	0.99286	0.00057812	582.2846159042911	103.37	0.61623	103.5	103.21	103.83	0.12622					23	15	3	0	0	0	0.37624	1	10978	10978		37.812	8.6415	1	663840			32722	15105	21580	21590	37345	37345					-0.020785630533737276
LMELQKIRRQI	11	Unmodified	_LMELQKIRRQI_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6237487792969	3	476.622023	1426.84424	2.8112	0.0013399	0.69657	0.000332	3.5078	0.0016719	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.78391	1	12854	12854		14.694	0	1	2689700			32723	1742	21581	21591	37346	37346					0.14789005733268823
LMEMTEAALLL	11	Unmodified	_LMEMTEAALLL_					0	0	0		ENSG00000163286|ENST00000295453|ALPG	ENSG00000163286|ENST00000295453|ALPG	ENSG00000163286|ENST00000295453|ALPG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	617.8261108398438	2	617.824717	1233.63488	1.2049	0.00074439	2.5877	0.0015987	3.7925	0.0023431	617.8263056713324	78.046	0.53503	78.173	77.93	78.465	0.12695					37	16	3	0	0	0	0.61774	1	7351	7351		42.396	2.338	1	252600			32724	5780	21582	21592	37347	37347					0.027410016651401747
LMEVKAMKLF	10	Unmodified	_LMEVKAMKLF_					0	0	0		nc|ENSG00000164100|O95803-2|NDST3;nc|ENSG00000164100|O95803-3|NDST3;ENSG00000164100|ENST00000296499|NDST3	nc|ENSG00000164100|O95803-2|NDST3	nc|ENSG00000164100|O95803-2|NDST3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.3390502929688	2	605.340338	1208.66612	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.009	1	14.926	14.426	15.426	-0.083363								0	0	0	0.45132	1	2	2		20.947	2.6848	1				32725	5918	21583	21593	37348	37348					0.07013619489862322
LMEYLIKTG	9	Unmodified	_LMEYLIKTG_					0	0	0		nc|ENSG00000063245|Q9Y6I3-3|EPN1;ENSG00000063245|ENST00000270460|EPN1;nc|ENSG00000063245|Q9Y6I3-1|EPN1	nc|ENSG00000063245|Q9Y6I3-3|EPN1	nc|ENSG00000063245|Q9Y6I3-3|EPN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	534.2938842773438	2	534.293911	1066.57327	-0.013223	-7.0649E-06	1.33	0.00071063	1.3168	0.00070357	534.294557708472	88.396	3.5338	88.603	87.204	90.738	0.20731					156	83	2	0	0	0	0.62081	1	8816	8816		45.952	3.0877	1	498070			32726	1091	21584	21594	37349	37349					0.042644380281672056
LMFCSFTM	8	Oxidation (M)	_LMFCSFTM(Oxidation (M))_		LMFCSFTM(1)		LM(-57)FCSFTM(57)	0	0	1		ENST00000471702.2_2_3:132339980-132400782:-|nuORF	ENST00000471702.2_2_3:132339980-132400782:-|nuORF	ENST00000471702.2_2_3:132339980-132400782:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.2061767578125	2	498.205392	994.396232	0.81334	0.00040521	1.9948	0.00099381	2.8081	0.001399	498.2062626831712	22.624	0.61982	22.685	22.32	22.94	0.060431					31	21	2	0	0	0	0.89567	1	700	700		57.453	18.647	2	54118			32727	12246	21585	21595	37350	37350		189			-0.10119057117981356
LMFIIICVIV	10	Unmodified	_LMFIIICVIV_					0	0	0		nc|ENSG00000111450|P32856-2|STX2	nc|ENSG00000111450|P32856-2|STX2	nc|ENSG00000111450|P32856-2|STX2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353515625	2	582.350174	1162.6858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.26	1	114.23	113.73	114.73	-0.024452								0	0	0	0.45132	1	12656	12656		19.36	0	1				32728	14844	21586	21596	37351	37351					0.11095995500659228
LMFVRKLLSD	10	Unmodified	_LMFVRKLLSD_					0	0	0		ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-4|SVEP1;nc|ENSG00000165124|Q4LDE5-2|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3524780273438	2	611.354834	1220.69511	-0.40518	-0.00024771	2.2197	0.001357	1.8145	0.0011093	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.77314	1	9909	9909		40.778	4.3314	1	5373200			32729	6050	21587	21597	37352	37352					0.09359480110538243
LMFVRKLLSD	10	Unmodified	_LMFVRKLLSD_					0	0	0		ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-4|SVEP1;nc|ENSG00000165124|Q4LDE5-2|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.354736328125	2	611.354834	1220.69511	1.142	0.00069816	1.5785	0.00096504	2.7205	0.0016632	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.86348	1	9744	9744		31.53	2.3598	1	17478000			32730	6050	21587	21597	37353	37353					0.09359480110538243
LMFVRKLLSD	10	Unmodified	_LMFVRKLLSD_					0	0	0		ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-4|SVEP1;nc|ENSG00000165124|Q4LDE5-2|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3553466796875	2	611.354834	1220.69511	-1.2523	-0.00076562	3.9822	0.0024345	2.7298	0.0016689	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.86218	1	9717	9717		32.812	3.6424	1	16503000			32731	6050	21587	21597	37354	37354					0.09359480110538243
LMGGTLGR	8	Unmodified	_LMGGTLGR_					0	0	0		ENSG00000103067|ENST00000473183|ESRP2;nc|ENSG00000103067|Q9H6T0|ESRP2	ENSG00000103067|ENST00000473183|ESRP2	ENSG00000103067|ENST00000473183|ESRP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2468566894531	2	402.723455	803.432358	-1.7908	-0.00072119	-4.1482	-0.0016706	-5.939	-0.0023918	402.72203984124525	103.85	0.53776	104.02	103.73	104.27	0.17445					17	12	2	0	0	0	0.4196	1	11019	11019		7.1934	0	1	44507			32732	2053	21588	21598	37355	37355					0.02277904165396194
LMGHPDPG	8	Oxidation (M)	_LM(Oxidation (M))GHPDPG_		LM(1)GHPDPG		LM(47)GHPDPG	0	0	1		ENST00000480996.1_1_9:6805652-6819052:+|nuORF	ENST00000480996.1_1_9:6805652-6819052:+|nuORF	ENST00000480996.1_1_9:6805652-6819052:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.19024658203125	2	420.189445	838.364338	1.8418	0.0007739	2.706	0.001137	4.5477	0.0019109	420.19057077134335	94.585	0.7523	94.526	94.35	95.102	-0.059212					21	17	2	0	0	0	0.92176	1	10088	10088		46.766	12.594	1	243170			32733	12450	21589	21599	37356	37356		192			-0.06130965485260731
LMGHQFLRG	9	Unmodified	_LMGHQFLRG_					0	0	0		ENST00000548845.5_1_12:53693515-53693821:+|nuORF	ENST00000548845.5_1_12:53693515-53693821:+|nuORF	ENST00000548845.5_1_12:53693515-53693821:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.781494140625	2	529.781836	1057.54912	0.4777	0.00025307	-2.2907	-0.0012136	-1.813	-0.00096051	529.7807050797124	49.497	1.236	49.957	49.582	50.818	0.45983					76	29	5	0	0	0	0.62081	1	4835	4835		45.952	1.8352	1	4861500			32734	13625	21590	21600	37357	37357					0.022646423851483632
LMGHQFLRG	9	Unmodified	_LMGHQFLRG_					0	0	0		ENST00000548845.5_1_12:53693515-53693821:+|nuORF	ENST00000548845.5_1_12:53693515-53693821:+|nuORF	ENST00000548845.5_1_12:53693515-53693821:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.78076171875	2	529.781836	1057.54912	0.62859	0.00033302	-2.5246	-0.0013375	-1.896	-0.0010045	529.7805735433727	49.319	1.5468	50.179	49.642	51.189	0.86044					96	37	4	0	0	0	0.62081	1	4826	4826		45.952	3.5558	1	4613700			32735	13625	21590	21600	37358	37358					0.022646423851483632
LMGIAGLKP	9	Unmodified	_LMGIAGLKP_					0	0	0		ENSG00000108506|ENST00000251334|INTS2;nc|ENSG00000108506|Q9H0H0|INTS2	ENSG00000108506|ENST00000251334|INTS2	ENSG00000108506|ENST00000251334|INTS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2742614746094	2	450.272781	898.531009	1.7291	0.00077856	1.6772	0.00075519	3.4063	0.0015338	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.77546	1	10153	10153		31.955	3.7006	1	51820000			32736	2410	21591	21601	37359	37359					0.07768507410457914
LMGKGMKR	8	Unmodified	_LMGKGMKR_					0	0	0		nc|ENSG00000136167|P13796-2|LCP1;ENSG00000136167|ENST00000323076|LCP1	nc|ENSG00000136167|P13796-2|LCP1	nc|ENSG00000136167|P13796-2|LCP1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	460.6626892089844	2	460.762058	919.509562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.732	1	27.844	27.344	28.344	0.11117								0	0	0	0.29498	1	1114	1114		26.796	1.3459	1				32737	4094	21592	21602	37360	37360					0.046587991100750514
LMGKLEVF	8	Unmodified	_LMGKLEVF_					0	0	0		ENST00000455321.1_1_10:52486845-52487529:-|nuORF	ENST00000455321.1_1_10:52486845-52487529:-|nuORF	ENST00000455321.1_1_10:52486845-52487529:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.76434326171875	2	468.764789	935.515025	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.212	1	42.167	41.667	42.667	-0.045467								0	0	0	0.29568	1	2817	2817		35.201	1.6851	1				32738	11949	21593	21603	37361	37361					0.0446880117353885
LMGLPPHPY	9	Unmodified	_LMGLPPHPY_					0	0	0			REV__ENSG00000147234|ENST00000683843|FRMPD3	REV__ENSG00000147234|ENST00000683843|FRMPD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.7697143554688	2	512.767863	1023.52117	-0.42239	-0.00021659	2.8338	0.0014531	2.4114	0.0012365	512.7691224162727	38.465	0.72042	38.476	38.195	38.915	0.010708					46	20	3	0	0	0	0.72098	1	2262	2262		39.021	5.5285	1	407540	+		32739	20061	21594	21604	37362	37362					0.010353194050594539
LMGRRDPR	8	Unmodified	_LMGRRDPR_					0	0	0		nc|ENSG00000186642|O00408-6|PDE2A	nc|ENSG00000186642|O00408-6|PDE2A	nc|ENSG00000186642|O00408-6|PDE2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.73291015625	2	500.777085	999.539617	-1.5672	-0.00078483	-3.964	-0.0019851	-5.5312	-0.0027699	500.7748581303174	30.48	0.84125	30.509	29.964	30.805	0.028618					23	18	2	0	0	0	0.4196	1	2023	2023		17.365	0	1	83141			32740	15161	21595	21605	37363	37363					0.03982874099631317
LMGRRDPR	8	Unmodified	_LMGRRDPR_					0	0	0		nc|ENSG00000186642|O00408-6|PDE2A	nc|ENSG00000186642|O00408-6|PDE2A	nc|ENSG00000186642|O00408-6|PDE2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.2573547363281	2	500.777085	999.539617	-0.48222	-0.00024149	-0.34793	-0.00017424	-0.83016	-0.00041572	500.7766970011969	53.091	0.53606	53.505	53.25	53.786	0.4139					20	12	2	0	0	0	0.4196	1	5329	5329		21.96	0	1	239590			32741	15161	21595	21605	37364	37364					0.03982874099631317
LMGSNEFSI	9	Unmodified	_LMGSNEFSI_					0	0	0			REV__ENST00000399788.6_1_12:431643-431676:-|nuORF	REV__ENST00000399788.6_1_12:431643-431676:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.2380676269531	2	499.236593	996.458632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.431	1	31.449	30.949	31.949	0.01836								0	0	0	0.29273	1	1696	1696		40.778	2.9666	1		+		32742	26237	21596	21606	37365	37365					-0.0397387145378616
LMHFPLSL	8	Unmodified	_LMHFPLSL_					0	0	0		ENSG00000175336|ENST00000398189|APOF	ENSG00000175336|ENST00000398189|APOF	ENSG00000175336|ENST00000398189|APOF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2777099609375	2	479.264956	956.515359	-0.80128	-0.00038403	-0.51111	-0.00024496	-1.3124	-0.00062898	479.26420389752445	84.048	0.28577	84.503	84.358	84.644	0.45556					8	6	2	0	0	0	0.4196	1	9784	9784		14.664	0	1	81089			32743	7010	21597	21607	37366	37366					0.035362208933975126
LMIQAALYPNN	11	Unmodified	_LMIQAALYPNN_					0	0	0			REV__ENSG00000175518|ENST00000380184|UBQLNL	REV__ENSG00000175518|ENST00000380184|UBQLNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	624.330810546875	2	624.326273	1246.63799	-0.16192	-0.00010109	-0.51385	-0.00032081	-0.67576	-0.0004219	624.3249994673045	63.904	0.85819	64.29	63.962	64.82	0.38681					30	19	2	0	0	0	0.58425	1	6927	6927		45.972	0	1	385050	+		32744	22071	21598	21608	37367	37367					0.024540128341413947
LMITNTILSMA	11	Unmodified	_LMITNTILSMA_					0	0	0			REV__ENSG00000149742|ENST00000279178|SLC22A9	REV__ENSG00000149742|ENST00000279178|SLC22A9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3663940429688	2	604.324885	1206.63522	-0.12435	-7.5146E-05	-1.7637	-0.0010658	-1.888	-0.001141	604.323360633471	104.69	0.36856	104.73	104.63	104.99	0.039856					11	8	3	0	0	0	0.17574	1	11393	11393		41.427	15.853	1	119040	+		32745	20192	21599	21609	37368	37368					0.040164213850175656
LMIVPVPL	8	Unmodified	_LMIVPVPL_					0	0	0		ENST00000428326.5_1_6:31619476-31619712:-|nuORF;ENST00000437771.5_1_6:31619479-31620329:-|nuORF;ENST00000433828.5_1_6:31619476-31619688:-|nuORF;ENST00000439687.6_1_6:31619476-31620282:-|nuORF;ENST00000424176.5_2_6:31619476-31620093:-|nuORF;ENST00000375964.10_1_6:31619476-31620282:-|nuORF	ENST00000428326.5_1_6:31619476-31619712:-|nuORF	ENST00000428326.5_1_6:31619476-31619712:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.2844543457031	2	441.280075	880.545597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.762	1	40.844	40.344	41.344	0.081345								0	0	0	0.30553	1	2614	2614		16.705	2.0409	1				32746	10810	21600	21610	37369	37369					0.10054579558584464
LMKDWIDGF	9	Unmodified	_LMKDWIDGF_					0	0	0			REV__ENSG00000117480|ENST00000243167|FAAH	REV__ENSG00000117480|ENST00000243167|FAAH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	562.7691650390625	2	562.775885	1123.53722	0.1168	6.573E-05	-3.5957	-0.0020236	-3.4789	-0.0019578	562.7737807030672	63.866	0.63213	63.831	63.511	64.143	-0.034256					41	19	3	0	0	0	0.28163	1	6089	6089		66.429	15.094	1	236840	+		32747	18264	21601	21611	37370	37370					-0.01961019148689047
LMKIEKFF	8	Unmodified	_LMKIEKFF_					0	0	0		ENSG00000147536|ENST00000276533|GINS4;chr8:41529388-41530184|58|13.71|0.57|4.59|+|ENST00000518671|GINS4,GINS4	ENSG00000147536|ENST00000276533|GINS4	ENSG00000147536|ENST00000276533|GINS4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.3018798828125	2	528.301539	1054.58852	-0.48442	-0.00025592	2.7245	0.0014394	2.2401	0.0011834	528.3027239654247	58.167	1.0966	58.56	57.929	59.025	0.39342					42	26	2	0	0	0	0.72312	1	6100	6100		66.429	2.222	1	1052300			32748	518	21602	21612	37371	37371					0.06341349615991021
LMKIKQKH	8	Unmodified	_LMKIKQKH_					0	0	0			REV__ENST00000497986.5_1_1:28562878-28564486:+|nuORF	REV__ENST00000497986.5_1_1:28562878-28564486:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8161010742188	2	513.318054	1024.62156	-1.5202	-0.00078036	-1.5551	-0.00079825	-3.0753	-0.0015786	513.3171098240366	43.168	1.3566	43.168	42.754	44.111	0					83	32	4	0	0	0	0.86791	1	3109	3109		28.254	1.4582	1	698430	+		32749	18906	21603	21613	37372	37372					0.1102297645870749
LMKIKQKH	8	Unmodified	_LMKIKQKH_					0	0	0			REV__ENST00000497986.5_1_1:28562878-28564486:+|nuORF	REV__ENST00000497986.5_1_1:28562878-28564486:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3167114257812	2	513.318054	1024.62156	0.32019	0.00016436	-3.7117	-0.0019053	-3.3915	-0.0017409	513.3159908318282	43.284	1.4208	43.257	42.839	44.259	-0.026768					81	33	4	0	0	0	0.884	1	3284	3284		33.516	1.5607	1	394850	+		32750	18906	21603	21613	37373	37373					0.1102297645870749
LMKIKQKH	8	Unmodified	_LMKIKQKH_					0	0	0			REV__ENST00000497986.5_1_1:28562878-28564486:+|nuORF	REV__ENST00000497986.5_1_1:28562878-28564486:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3162231445312	2	513.318054	1024.62156	-0.78903	-0.00040502	-2.5621	-0.0013152	-3.3511	-0.0017202	513.316563461299	43.382	2.0824	43.347	42.842	44.924	-0.035816					87	48	3	0	0	0	0.86288	2	3440	3416;3440		28.254	2.5934	1	377070	+		32751	18906	21603	21613	37374;37375	37375					0.1102297645870749
LMKIKQKH	8	Unmodified	_LMKIKQKH_					0	0	0			REV__ENST00000497986.5_1_1:28562878-28564486:+|nuORF	REV__ENST00000497986.5_1_1:28562878-28564486:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.3165893554688	2	513.318054	1024.62156	-1.7271	-0.00088655	-1.4421	-0.00074027	-3.1692	-0.0016268	513.3171524632667	41.711	0.92437	42.125	41.86	42.784	0.4139					63	23	4	0	0	0	0.86791	1	3699	3699		28.254	4.0515	1	2398900	+		32752	18906	21603	21613	37376	37376					0.1102297645870749
LMKKRRNWHR	10	Unmodified	_LMKKRRNWHR_					0	0	0		nc|ENSG00000006459|Q6ZMT4-2|KDM7A;ENSG00000006459|ENST00000397560|KDM7A	nc|ENSG00000006459|Q6ZMT4-2|KDM7A	nc|ENSG00000006459|Q6ZMT4-2|KDM7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	475.6083984375	3	475.610451	1423.80952	-0.0098536	-4.6865E-06	-4.4428	-0.002113	-4.4527	-0.0021177	475.6083074835196	51.584	0.56668	51.582	51.307	51.874	-0.0020447					21	12	2	0	0	0	0.85441	1	4419	4419		20.837	2.3061	1	114630			32753	700	21604	21614	37377	37377					0.11457227435835193
LMKLLPPPI	9	Unmodified	_LMKLLPPPI_					0	0	0		ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.3271484375	2	511.327556	1020.64056	-0.052165	-2.6674E-05	-0.80814	-0.00041323	-0.86031	-0.0004399	511.3270422766062	97.471	2.3305	97.527	97.032	99.363	0.056839					141	53	4	0	0	0	0.7932	1	10294	10294		20.482	0	1	1704400			32754	7056	21605	21615	37378	37378					0.13106513029754296
LMKLLPPPI	9	Unmodified	_LMKLLPPPI_					0	0	0		ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.3270263671875	2	511.327556	1020.64056	0.52337	0.00026762	-1.3677	-0.00069932	-0.84429	-0.00043171	511.3267559398498	97.201	2.4372	97.249	96.783	99.22	0.048157					148	56	4	0	0	0	0.7932	1	10379	10379		20.482	4.8456	1	1880900			32755	7056	21605	21615	37379	37379					0.13106513029754296
LMKQIAAPTIE	11	Unmodified	_LMKQIAAPTIE_					0	0	0			REV__nc|ENSG00000141380|Q15532-2|SS18	REV__nc|ENSG00000141380|Q15532-2|SS18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5649108886719	3	405.565291	1213.67404	-0.18903	-7.6663E-05	-1.1296	-0.00045811	-1.3186	-0.00053477	405.56470246140424	60.148	1.7799	60.134	59.159	60.939	-0.013729					123	48	3	0	0	0	0.71207	1	5484	5484		29.551	0.38069	1	242840	+		32756	19678	21606	21616	37380	37380					0.07575470010988283
LMKQIAAPTIE	11	Unmodified	_LMKQIAAPTIE_					0	0	0			REV__nc|ENSG00000141380|Q15532-2|SS18	REV__nc|ENSG00000141380|Q15532-2|SS18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5643310546875	3	405.565291	1213.67404	-0.18889	-7.6609E-05	-1.8632	-0.00075567	-2.0521	-0.00083228	405.56454193818195	61.137	0.35434	61.124	60.82	61.174	-0.012199					23	15	2	0	0	0	0.75121	1	5664	5664		21.78	0.094677	1	157390	+		32757	19678	21606	21616	37381	37381					0.07575470010988283
LMKRLQRGDL	10	Unmodified	_LMKRLQRGDL_					0	0	0			REV__ENSG00000138166|ENST00000369583|DUSP5	REV__ENSG00000138166|ENST00000369583|DUSP5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	615.4055786132812	2	615.360982	1228.70741	0.47993	0.00029533	-2.8281	-0.0017403	-2.3481	-0.0014449	615.3576784890419	52.47	0.26384	52.541	52.411	52.675	0.070713					10	7	3	0	0	0	0.37624	1	4246	4246		14.137	0	1	51138	+		32758	19447	21607	21617	37382	37382					0.10220516573576788
LMKSAKLVH	9	Unmodified	_LMKSAKLVH_					0	0	0			REV__ENSG00000078114|ENST00000377122|NEBL	REV__ENSG00000078114|ENST00000377122|NEBL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8084716796875	2	513.810062	1025.60557	-1.4445	-0.00074222	-0.71223	-0.00036595	-2.1568	-0.0011082	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.7932	1	3669	3669		24.203	0	1	1675700	+		32759	16759	21608	21618	37383	37383					0.09379270221802471
LMKVHKNL	8	Unmodified	_LMKVHKNL_					0	0	0			REV__ENSG00000113088|ENST00000231009|GZMK	REV__ENSG00000113088|ENST00000231009|GZMK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7957763671875	2	491.796955	981.579357	-2.0878	-0.0010268	-0.45067	-0.00022164	-2.5385	-0.0012484	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.86791	1	4867	4867		28.254	0	1	1484300	+		32760	17977	21609	21619	37384	37384					0.08783001050335315
LMLALLILP	9	Unmodified	_LMLALLILP_					0	0	0		ENST00000499860.6_1_6:109700790-109700859:-|nuORF	ENST00000499860.6_1_6:109700790-109700859:-|nuORF	ENST00000499860.6_1_6:109700790-109700859:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.828857421875	2	498.829932	995.645311	-1.7906	-0.00089322	3.5683	0.00178	1.7776	0.00088674	498.83168509254983	43.951	0.61922	43.949	43.627	44.246	-0.002449					27	15	3	0	0	0	0.78292	1	3419	3419		29.842	0	1	74301			32761	12835	21610	21620	37385	37385					0.14731397172545257
LMLFSIMIQ	9	Oxidation (M)	_LMLFSIM(Oxidation (M))IQ_		LMLFSIM(1)IQ		LM(-36)LFSIM(36)IQ	0	0	1			REV__ENST00000283943.9_1_2:230632112-230632244:-|nuORF	REV__ENST00000283943.9_1_2:230632112-230632244:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	556.29736328125	2	556.298139	1110.58172	-1.0007	-0.00055668	1.3301	0.00073995	0.32944	0.00018327	556.2983739698411	75.821	0.53299	75.909	75.653	76.186	0.087631					21	13	2	0	0	0	0.58151	1	7038	7038		47.916	7.343	2	92261	+		32762	24621	21611	21621	37386	37386		384			0.030856686731340233
LMLGPRVAVS	10	Unmodified	_LMLGPRVAVS_					0	0	0		ENST00000472113.5_1_9:140470178-140470235:-|nuORF	ENST00000472113.5_1_9:140470178-140470235:-|nuORF	ENST00000472113.5_1_9:140470178-140470235:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.8058471679688	2	521.807519	1041.60049	-0.93882	-0.00048988	-1.7126	-0.00089362	-2.6514	-0.0013835	521.8064230689948	44.681	1.2973	45.525	44.82	46.118	0.84438					61	31	3	0	0	0	0.53935	1	4145	4145		53.351	9.2347	1	1040200			32763	12255	21612	21622	37387	37387					0.08134966359216378
LMLGVTLPN	9	Unmodified	_LMLGVTLPN_					0	0	0		ENSG00000106404|ENST00000308344|CLDN15	ENSG00000106404|ENST00000308344|CLDN15	ENSG00000106404|ENST00000308344|CLDN15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2776794433594	2	479.275521	956.536489	-0.098244	-4.7086E-05	4.0257	0.0019294	3.9274	0.0018823	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.78058	1	8682	8682		30.504	2.6214	1	6799600			32764	2295	21613	21623	37388	37388					0.05648186202245142
LMLHARCCL	9	Unmodified	_LMLHARCCL_					0	0	0		ENSG00000138085|ENST00000380171|ATRAID;nc|ENSG00000138085|Q6UW56-3|ATRAID;ENST00000491220.1_1_2:27436068-27438261:+|nuORF;ENST00000484646.1_1_2:27435071-27436167:+|nuORF	ENSG00000138085|ENST00000380171|ATRAID	ENSG00000138085|ENST00000380171|ATRAID	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.829345703125	2	530.26665	1058.51875	0.045687	2.4226E-05	4.289	0.0022743	4.3347	0.0022985	530.7699959358889	74.05	0.47289	74.609	74.326	74.799	0.55891					15	10	2	0	0	0	0.20789	1	8330	8330		40.573	10.069	1	253620			32765	4268	21614	21624	37389	37389					-0.008171755959210714
LMLIVPWR	8	Unmodified	_LMLIVPWR_					0	0	0			REV__ENST00000373518.1_1_X:72347145-72347370:-|nuORF	REV__ENST00000373518.1_1_X:72347145-72347370:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	514.71337890625	2	514.309698	1026.60484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.626	1	66.759	66.259	67.259	0.13326								0	0	0	0.30004	1	5918	5918		21.702	0.7554	1		+		32766	25763	21615	21625	37390	37390					0.0926047557277343
LMLMGYSRPS	10	Unmodified	_LMLMGYSRPS_					0	0	0			REV__ENST00000463752.1_1_16:24183527-24185902:+|nuORF	REV__ENST00000463752.1_1_16:24183527-24185902:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	577.7885131835938	2	577.788469	1153.56239	-0.59206	-0.00034209	0.24688	0.00014264	-0.34519	-0.00019944	577.7883620028217	49.982	0.62238	50.43	50.143	50.765	0.44761					44	14	4	0	0	0	0.64457	1	4902	4902		47.657	1.6851	1	1447800	+		32767	27082	21616	21626	37391	37391					-0.008252876177721191
LMLPKGKEL	9	Unmodified	_LMLPKGKEL_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.8128051757812	2	514.81227	1027.60999	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.422	1	65.45	64.95	65.95	0.027321								0	0	0	0.39224	1	6202	6202		53.351	5.4358	1		+		32768	17579	21617	21627	37392	37392					0.0972873464472741
LMLRPAQGDL	10	Unmodified	_LMLRPAQGDL_					0	0	0		ENST00000539421.1_1_17:6024012-6024231:+|nuORF	ENST00000539421.1_1_17:6024012-6024231:+|nuORF	ENST00000539421.1_1_17:6024012-6024231:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.8302612304688	2	557.307884	1112.60121	3.0866	0.0017202	-3.8462	-0.0021435	-0.75962	-0.00042334	557.3057871281665	101.07	0.61311	101.02	100.67	101.28	-0.052109					21	14	2	0	0	0	0.37624	1	10997	10997		27.882	0	1	77202			32769	13477	21618	21628	37393	37393					0.049417610082628016
LMLTNSQLL	9	Unmodified	_LMLTNSQLL_					0	0	0			REV__nc|ENSG00000188554|Q14596-2|NBR1	REV__nc|ENSG00000188554|Q14596-2|NBR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7929077148438	2	516.791535	1031.56852	-0.27075	-0.00013992	3.9455	0.002039	3.6748	0.0018991	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.72402	1	8852	8852		38.806	7.2763	1	817800	+		32770	23010	21619	21629	37394	37394					0.05399553885399655
LMMRQTVL	8	Unmodified	_LMMRQTVL_					0	0	0			REV__nc|ENSG00000130713|Q13868-3|EXOSC2	REV__nc|ENSG00000130713|Q13868-3|EXOSC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2769470214844	2	496.274998	990.535443	-0.3131	-0.00015538	3.3249	0.0016501	3.0118	0.0014947	496.27651865051325	77.211	0.72578	77.779	77.453	78.179	0.56836					43	16	3	0	0	0	0.93293	1	8821	8821		51.335	1.8939	1	1008400	+		32771	18897	21620	21630	37395	37395					0.03979648561698923
LMNFSVEQHI	10	Unmodified	_LMNFSVEQHI_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.5390930175781	3	406.537624	1216.59104	0.13634	5.5428E-05	3.4673	0.0014096	3.6036	0.001465	406.5390050089025	30.723	0.64022	30.748	30.447	31.087	0.025013					52	19	4	0	0	0	0.86802	1	1621	1621		27.047	0.98393	1	266510	+		32772	16310	21621	21631	37396	37396					-0.008588467169829528
LMNFSVEQHI	10	Unmodified	_LMNFSVEQHI_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.5389709472656	3	406.537624	1216.59104	-0.33641	-0.00013676	4.0258	0.0016366	3.6894	0.0014999	406.53915043709776	30.749	0.82197	30.702	30.309	31.131	-0.047064					63	21	4	0	0	0	0.71918	1	1694	1694		43.651	2.5707	1	318470	+		32773	16310	21621	21631	37397	37397					-0.008588467169829528
LMNKLQPG	8	Unmodified	_LMNKLQPG_					0	0	0		nc|ENSG00000064666|Q99439-2|CNN2;ENSG00000064666|ENST00000263097|CNN2	nc|ENSG00000064666|Q99439-2|CNN2	nc|ENSG00000064666|Q99439-2|CNN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7556457519531	2	450.752213	899.489873	0.5597	0.00025229	3.7702	0.0016994	4.3299	0.0019517	450.7538239580323	79.562	2.1146	79.701	78.151	80.265	0.13883					102	73	2	0	0	0	0.88915	1	7524	7524		35.201	1.6851	1	128600			32774	1107	21622	21632	37398	37398					0.0361074637096408
LMNRPRFQS	9	Unmodified	_LMNRPRFQS_					0	0	0			REV__ENST00000502782.5_1_5:34838982-34863053:+|nuORF	REV__ENST00000502782.5_1_5:34838982-34863053:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.0540161132812	2	574.8033	1147.59205	0.5894	0.00033879	-4.1524	-0.0023868	-3.563	-0.002048	574.8008435132051	69.049	0.45257	69.177	68.924	69.377	0.12838					30	18	2	0	0	0	0.20789	1	6259	6259		17.365	0	1	150300	+		32775	27829	21623	21633	37399	37399					0.02415412442564957
LMPGASGAEVK	11	Unmodified	_LMPGASGAEVK_					0	0	0		ENST00000579147.5_1_17:61906826-61909326:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5;ENSG00000087191|ENST00000310144|PSMC5;ENST00000584657.1_1_17:61908799-61909039:+|nuORF	ENST00000579147.5_1_17:61906826-61909326:+|nuORF	ENST00000579147.5_1_17:61906826-61909326:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.78955078125	2	530.278792	1058.54303	-1.8104	-0.00096	-1.4404	-0.00076381	-3.2508	-0.0017238	530.277509598378	42.829	0.33064	43.527	43.381	43.711	0.69754					11	7	2	0	0	0	0.17318	1	3835	3835		19.104	6.2918	1	166070			32776	1570	21624	21634	37400	37400					0.016100793629675536
LMPKVNETQ	9	Unmodified	_LMPKVNETQ_					0	0	0			REV__ENST00000508157.3_1_5:70790975-70807035:+|nuORF;REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.1806640625	2	530.278792	1058.54303	0.40955	0.00021717	2.1829	0.0011576	2.5925	0.0013747	530.7795941011537	31.45	0.38445	31.557	31.29	31.675	0.10707					11	8	2	0	0	0	0.20789	1	2159	2159		36.447	10.997	1	53226	+		32777	19963;27917	21625	21635	37401	37401					0.016100793629675536
LMPPKLGAR	9	Unmodified	_LMPPKLGAR_					0	0	0			REV__nc|ENSG00000116852|O75037-3|KIF21B	REV__nc|ENSG00000116852|O75037-3|KIF21B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956237792969	2	491.796955	981.579357	-0.71315	-0.00035073	-1.6418	-0.00080745	-2.355	-0.0011582	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.78536	1	3677	3677		29.15	0	1	1219600	+		32778	18229	21626	21636	37402	37402					0.08783001050346684
LMPPKRQL	8	Unmodified	_LMPPKRQL_					0	0	0			REV__ENSG00000178921|ENST00000314666|PFAS	REV__ENSG00000178921|ENST00000314666|PFAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7947692871094	2	491.796955	981.579357	-0.25318	-0.00012451	-2.1971	-0.0010805	-2.4503	-0.001205	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.86791	1	3829	3829		28.254	6.2944	1	1502200	+		32779	22301	21627	21637	37403	37403					0.08783001050335315
LMPPKRQL	8	Unmodified	_LMPPKRQL_					0	0	0			REV__ENSG00000178921|ENST00000314666|PFAS	REV__ENSG00000178921|ENST00000314666|PFAS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79559326171875	2	491.796955	981.579357	-1.1725	-0.00057664	-1.389	-0.00068311	-2.5615	-0.0012597	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.86791	1	4304	4304		28.254	2.8041	1	3001500	+		32780	22301	21627	21637	37404	37404					0.08783001050335315
LMPWLHGR	8	Unmodified	_LMPWLHGR_					0	0	0			REV__ENST00000377893.2_1_1:6307779-6307875:-|nuORF	REV__ENST00000377893.2_1_1:6307779-6307875:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	504.3479309082031	2	505.273647	1008.53274	-0.77186	-0.00039	3.2346	0.0016343	2.4627	0.0012443	505.27528977159454	37.023	1.1979	36.969	36.649	37.847	-0.053558					46	26	3	0	0	0	0.4196	1	2615	2615		13.775	0	1	213340	+		32781	25876	21628	21638	37405	37405					0.028815612190669526
LMQEKSHAE	9	Unmodified	_LMQEKSHAE_					0	0	0			REV__ENST00000391694.4_1_19:58988585-58991546:+|nuORF	REV__ENST00000391694.4_1_19:58988585-58991546:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.3009033203125	2	536.758223	1071.50189	0.34946	0.00018757	-3.4909	-0.0018738	-3.1415	-0.0016862	536.7558432498362	50.271	0.30775	50.275	50.121	50.429	0.0035973					11	6	2	0	0	0	0.20789	1	4270	4270		39.253	0	1	59666	+		32782	26004	21629	21639	37406	37406					-0.030996816764854884
LMQTPGQFIP	10	Unmodified	_LMQTPGQFIP_					0	0	0			REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	566.2994995117188	2	566.296985	1130.57942	-0.95068	-0.00053837	0.43738	0.00024768	-0.51331	-0.00029069	566.2968460061454	63.22	0.57903	63.22	62.903	63.483	0					32	24	2	0	0	0	0.6116	1	5545	5545		49.442	3.4693	1	74094	+		32783	27644	21630	21640	37407	37407					0.019349562596971737
LMQTPGQFIP	10	Unmodified	_LMQTPGQFIP_					0	0	0			REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	566.296985	1130.57942	-0.95068	-0.00053837	0.43738	0.00024768	-0.51331	-0.00029069	566.2968460061454	63.22	0.57903	63.22	62.903	63.483	0	0.058861	0.00064321	NaN	49.442	32	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74094	+		32784	27644	21630	21640							0.019349562596971737
LMQTPGQFIP	10	Unmodified	_LMQTPGQFIP_					0	0	0			REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	566.296985	1130.57942	-1.2313	-0.00069726	0.39552	0.00022398	-0.83575	-0.00047328	566.2968522915124	63.266	0.51223	63.261	62.991	63.503	-0.0055504	0.099017	0.00059581	NaN	49.442	40	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74336	+		32785	27644	21630	21640							0.019349562596971737
LMQTPGQFIP	10	Unmodified	_LMQTPGQFIP_					0	0	0			REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	566.296985	1130.57942	0.083791	4.7451E-05	-1.0302	-0.00058339	-0.94639	-0.00053594	566.2961474477587	63.173	0.46274	63.139	62.869	63.331	-0.03371	-0.022695	-0.0010189	NaN	49.442	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119740	+		32786	27644	21630	21640							0.019349562596971737
LMQTPGQFIP	10	Unmodified	_LMQTPGQFIP_					0	0	0			REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	566.296985	1130.57942	0.41285	0.0002338	-0.57585	-0.0003261	-0.163	-9.2306E-05	566.2964180906109	63.052	0.48808	63.166	62.931	63.419	0.11388	0.0045007	-0.00050436	NaN	49.442	36	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111620	+		32787	27644	21630	21640							0.019349562596971737
LMQTPGQFIP	10	Unmodified	_LMQTPGQFIP_					0	0	0			REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	566.296985	1130.57942	0.52667	0.00029825	-0.86228	-0.00048831	-0.33561	-0.00019006	566.2963128105172	62.897	0.4052	63.019	62.928	63.333	0.12205	-0.14268	-0.00082877	NaN	49.442	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130550	+		32788	27644	21630	21640							0.019349562596971737
LMQTPGQFIP	10	Unmodified	_LMQTPGQFIP_					0	0	0			REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	566.296985	1130.57942	-0.51839	-0.00029356	0.13298	7.5308E-05	-0.38541	-0.00021825	566.2969494985877	63.205	0.3886	63.228	62.996	63.384	0.022987	0.06693	0.00029846	NaN	49.442	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85132	+		32789	27644	21630	21640							0.019349562596971737
LMQWYFHRRLR	11	Unmodified	_LMQWYFHRRLR_					0	0	0			REV__ENSG00000260903|ENST00000562532|XKR7	REV__ENSG00000260903|ENST00000562532|XKR7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.292724609375	3	535.957628	1604.85106	-2.0459	-0.0010965	2.1913	0.0011744	0.14535	7.7903E-05	535.9587639371827	41.984	0.99572	42.681	42.344	43.339	0.69754					63	24	4	0	0	0	0.85873	1	3749	3749		5.4129	0.52678	1	1892600	+		32790	23939	21631	21641	37408	37408					0.07282363404510761
LMRAQLQKS	9	Unmodified	_LMRAQLQKS_					0	0	0			REV__nc|ENSG00000156042|Q5T0N1-2|CFAP70	REV__nc|ENSG00000156042|Q5T0N1-2|CFAP70	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.8052368164062	2	537.808051	1073.60155	-1.206	-0.00064858	-2.1664	-0.0011651	-3.3724	-0.0018137	537.8068072259658	58.499	0.79393	58.891	58.44	59.234	0.39209					32	18	2	0	0	0	0.64555	1	6147	6147		44.377	3.599	1	645250	+		32791	20464	21632	21642	37409	37409					0.06769180728088031
LMRKDKKKLRR	11	Unmodified	_LMRKDKKKLRR_					0	0	0		ENSG00000196284|ENST00000371459|SUPT3H;nc|ENSG00000196284|O75486-4|SUPT3H	ENSG00000196284|ENST00000371459|SUPT3H	ENSG00000196284|ENST00000371459|SUPT3H	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.2992858886719	3	491.317045	1470.92931	-1.6432	-0.00080736	-3.9126	-0.0019223	-5.5558	-0.0027297	491.3151183977432	107.88	0.14127	107.92	107.79	107.93	0.036125					7	3	3	0	0	0	0.18068	1	11529	11529		11.455	0.86782	1	1384700			32792	8034	21633	21643	37410	37410					0.21267795989729166
LMRKPIPQ	8	Unmodified	_LMRKPIPQ_					0	0	0			REV__ENSG00000137547|ENST00000260102|MRPL15	REV__ENSG00000137547|ENST00000260102|MRPL15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79571533203125	2	491.796955	981.579357	0.30701	0.00015099	-2.816	-0.0013849	-2.509	-0.0012339	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.88915	1	3406	3406		35.201	1.6851	1	3201400	+		32793	19390	21634	21644	37411	37411					0.08783001050335315
LMRKPPDS	8	Unmodified	_LMRKPPDS_					0	0	0		ENSG00000148848|ENST00000448723|ADAM12;nc|ENSG00000148848|O43184|ADAM12	ENSG00000148848|ENST00000448723|ADAM12	ENSG00000148848|ENST00000448723|ADAM12	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2876892089844	2	472.25512	942.495686	-0.9743	-0.00046012	3.9867	0.0018827	3.0124	0.0014226	472.25660310637056	95.52	0.25591	95.52	95.401	95.657	0					10	5	2	0	0	0	0.4196	1	9517	9517		26.796	3.7536	1	125230			32794	4988	21635	21645	37412	37412					0.02213844882635385
LMRPRSRRTRV	11	Unmodified	_LMRPRSRRTRV_					0	0	0		ENST00000257604.9_2_12:112563767-112563923:+|nuORF	ENST00000257604.9_2_12:112563767-112563923:+|nuORF	ENST00000257604.9_2_12:112563767-112563923:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.62371826171875	3	476.621127	1426.84155	2.8112	0.0013399	2.5746	0.0012271	5.3858	0.002567	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.7896	2	12920	12920;13241		13.508	3.404	1	2689700			32795	9355	21636	21646	37413;37414	37413					0.14520595118960955
LMRPVRAVPRA	11	Unmodified	_LMRPVRAVPRA_					0	0	0		ENST00000046640.7_1_17:3540070-3540534:+|nuORF	ENST00000046640.7_1_17:3540070-3540534:+|nuORF	ENST00000046640.7_1_17:3540070-3540534:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5919494628906	3	422.592286	1264.75503	-0.1066	-4.5049E-05	1.236	0.00052231	1.1294	0.00047726	422.59267390734004	52.957	1.6433	52.953	51.914	53.557	-0.0033035					88	43	3	0	0	0	0.1745	1	4655	4655		17.833	3.7471	1	133040			32796	9072	21637	21647	37415	37415					0.13324215564421138
LMRPVRAVPRA	11	Unmodified	_LMRPVRAVPRA_					0	0	0		ENST00000046640.7_1_17:3540070-3540534:+|nuORF	ENST00000046640.7_1_17:3540070-3540534:+|nuORF	ENST00000046640.7_1_17:3540070-3540534:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.3822021484375	2	633.384791	1264.75503	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.872	1	58.841	58.341	59.341	-0.030888								0	0	0	0.56276	1	5491	5491		9.7057	0	1				32797	9072	21637	21647	37416	37416					0.13324215564421138
LMRPVRAVPRA	11	Unmodified	_LMRPVRAVPRA_					0	0	0		ENST00000046640.7_1_17:3540070-3540534:+|nuORF	ENST00000046640.7_1_17:3540070-3540534:+|nuORF	ENST00000046640.7_1_17:3540070-3540534:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	422.592286	1264.75503	-0.72913	-0.00030813	1.7773	0.00075106	1.0481	0.00044294	422.59296810914583	52.674	1.95	52.65	51.696	53.646	-0.023849	-0.19668	0.00080991	NaN	17.833	74	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181930			32798	9072	21637	21647							0.13324215564421138
LMRPVRAVPRA	11	Unmodified	_LMRPVRAVPRA_					0	0	0		ENST00000046640.7_1_17:3540070-3540534:+|nuORF	ENST00000046640.7_1_17:3540070-3540534:+|nuORF	ENST00000046640.7_1_17:3540070-3540534:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	422.592286	1264.75503	0.32778	0.00013852	0.39841	0.00016837	0.72619	0.00030688	422.59234700993676	52.514	1.6976	52.937	52.596	54.293	0.42348	0.090352	-0.00093818	NaN	17.833	80	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	422970			32799	9072	21637	21647							0.13324215564421138
LMRRQEELRRM	11	Unmodified	_LMRRQEELRRM_					0	0	0		ENSG00000147140|ENST00000276079|NONO;ENST00000471419.6_1_X:70511819-70517312:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO;ENST00000473525.1_1_X:70516758-70517827:+|nuORF;nc|ENSG00000116560|P23246-2|SFPQ;ENSG00000116560|ENST00000357214|SFPQ	ENSG00000147140|ENST00000276079|NONO;nc|ENSG00000116560|P23246-2|SFPQ	nc|ENSG00000116560|P23246-2|SFPQ	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3167724609375	3	506.6099	1516.80787	-0.57959	-0.00029363	-1.8762	-0.0009505	-2.4558	-0.0012441	506.6087453311031	59.471	0.39841	59.471	59.258	59.656	0.00051117					14	9	2	0	0	0	0.17911	1	5119	5119		13.508	0	1	78644			32800	4885;2926	21638	21648	37417	37417					0.07013805564884024
LMRSRRIT	8	Unmodified	_LMRSRRIT_					0	0	0			REV__nc|ENSG00000151148|Q7Z3V4-2|UBE3B	REV__nc|ENSG00000151148|Q7Z3V4-2|UBE3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.4566650390625	2	516.808385	1031.60222	1.1615	0.0006003	-1.4967	-0.00077349	-0.33511	-0.00017319	516.8072211042548	36.818	0.49446	37.304	36.998	37.492	0.48581					18	11	2	0	0	0	0.4196	1	2903	2903		17.365	0	1	111690	+		32801	20238	21639	21649	37418	37418					0.08768020167826762
LMRSSTLIGC	10	Unmodified	_LMRSSTLIGC_					0	0	0			REV__chr18:24692640-24694256|29|40.07|0.0|21.93|+|2|LINC01915,LINC01915|1	REV__chr18:24692640-24694256|29|40.07|0.0|21.93|+|2|LINC01915,LINC01915|1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.7809448242188	2	540.780644	1079.54674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.704	1	59.737	59.237	60.237	0.032822								0	0	0	0.45132	1	5526	5526		35.618	2.1027	1		+		32802	15669	21640	21650	37419	37419					0.010144258651962446
LMRVLAPIGG	10	Unmodified	_LMRVLAPIGG_					0	0	0			REV__ENSG00000173801|ENST00000393931|JUP	REV__ENSG00000173801|ENST00000393931|JUP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.80859375	2	513.810062	1025.60557	-0.37343	-0.00019187	-1.6207	-0.00083275	-1.9942	-0.0010246	513.8091146469294	57.311	1.5723	57.391	56.954	58.526	0.079643					97	72	2	0	0	0	0.84112	1	4908	4908		37.159	11.709	1	149580	+		32803	21952	21641	21651	37420	37420					0.09379270221802471
LMRVRVIYT	9	Unmodified	_LMRVRVIYT_					0	0	0			REV__ENSG00000146904|ENST00000275815|EPHA1	REV__ENSG00000146904|ENST00000275815|EPHA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.843017578125	2	575.841894	1149.66923	0.91732	0.00052823	0.78637	0.00045282	1.7037	0.00098106	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.7932	1	9824	9824		25.45	3.4903	1	5468500	+		32804	20039	21642	21652	37421	37421					0.10038630658914371
LMSLLAVSRRA	11	Unmodified	_LMSLLAVSRRA_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;ENST00000583043.5_1_18:67684852-67806940:-|nuORF	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2420959472656	3	406.244664	1215.71216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.264	1	24.278	23.778	24.778	0.013996								0	0	0	0.56276	1	816	816		33.039	9.6615	1				32805	7065	21643	21653	37422	37422					0.1129340071634033
LMSVDSLSF	9	Unmodified	_LMSVDSLSF_					0	0	0			REV__nc|ENSG00000114805|Q4KWH8|PLCH1	REV__nc|ENSG00000114805|Q4KWH8|PLCH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7470703125	2	499.746793	997.479033	0.048924	2.445E-05	0.3088	0.00015432	0.35772	0.00017877	499.74682857522964	74.518	3.0175	75.077	74.05	77.067	0.55891					154	74	3	0	0	0	0.39977	3	8464	8392;8464;8477		57.811	5.3107	1	1021700	+		32806	29793	21644	21654	37423;37424;37425	37424					-0.019807007939675714
LMTIMEDY	8	Oxidation (M)	_LM(Oxidation (M))TIMEDY_		LM(0.971)TIM(0.029)EDY		LM(15)TIM(-15)EDY	0	0	1		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.227294921875	2	516.224836	1030.43512	0.16773	8.6587E-05	1.2878	0.00066478	1.4555	0.00075136	516.2253170876401	52.138	0.57215	52.562	52.276	52.848	0.42348					22	13	2	0	0	0	0.93529	1	5208	5208		52.299	6.3269	2	1162800			32807	1442;3511	21645	21655	37426	37426		26			-0.07888053282636065
LMTIMEDY	8	Oxidation (M)	_LM(Oxidation (M))TIMEDY_		LM(1)TIMEDY		LM(47)TIM(-47)EDY	0	0	1		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2247924804688	2	516.224836	1030.43512	0.46151	0.00023825	1.4592	0.00075326	1.9207	0.0009915	516.2253561922491	51.875	0.56909	52.542	52.271	52.84	0.6673					24	13	3	0	0	0	0.84634	1	5200	5200		60.294	12.637	2	1169000			32808	1442;3511	21645	21655	37427	37427		26			-0.07888053282636065
LMTLIVGISA	10	Unmodified	_LMTLIVGISA_					0	0	0		ENST00000521195.1_1_8:104320096-104343734:+|nuORF;nc|ENSG00000164930|O60353-2|FZD6;ENSG00000164930|ENST00000358755|FZD6	ENST00000521195.1_1_8:104320096-104343734:+|nuORF	ENST00000521195.1_1_8:104320096-104343734:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.3059997558594	2	509.304278	1016.594	-0.80877	-0.00041191	3.9291	0.0020011	3.1203	0.0015892	509.30614096875837	93.406	1.6722	93.406	92.938	94.61	0					114	38	4	0	0	0	0.85934	1	9195	9195		35.618	2.8059	1	1703100			32809	6024	21646	21656	37428	37428					0.08637028407827074
LMTLIVGISA	10	Unmodified	_LMTLIVGISA_					0	0	0		ENST00000521195.1_1_8:104320096-104343734:+|nuORF;nc|ENSG00000164930|O60353-2|FZD6;ENSG00000164930|ENST00000358755|FZD6	ENST00000521195.1_1_8:104320096-104343734:+|nuORF	ENST00000521195.1_1_8:104320096-104343734:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.3057556152344	2	509.304278	1016.594	0.38214	0.00019463	2.5317	0.0012894	2.9139	0.001484	509.30545060509706	93	1.7659	93.046	92.369	94.135	0.045448					129	41	4	0	0	0	0.8608	1	9745	9745		34.173	2.6427	1	3009900			32810	6024	21646	21656	37429	37429					0.08637028407827074
LMTLIVGISA	10	Unmodified	_LMTLIVGISA_					0	0	0		ENST00000521195.1_1_8:104320096-104343734:+|nuORF;nc|ENSG00000164930|O60353-2|FZD6;ENSG00000164930|ENST00000358755|FZD6	ENST00000521195.1_1_8:104320096-104343734:+|nuORF	ENST00000521195.1_1_8:104320096-104343734:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.3059997558594	2	509.304278	1016.594	-0.37346	-0.00019021	3.4533	0.0017588	3.0798	0.0015685	509.30591642174505	92.904	1.3737	93.13	92.62	93.993	0.22547					101	32	4	0	0	0	0.8608	1	9457	9457		34.173	3.8548	1	2213400			32811	6024	21646	21656	37430	37430					0.08637028407827074
LMTPQELIN	9	Unmodified	_LMTPQELIN_					0	0	0		nc|ENSG00000003096|Q9P2N7-2|KLHL13;ENSG00000003096|ENST00000540167|KLHL13;nc|ENSG00000003096|Q9P2N7-4|KLHL13;nc|ENSG00000003096|Q9P2N7|KLHL13;nc|ENSG00000003096|Q9P2N7-5|KLHL13	nc|ENSG00000003096|Q9P2N7-2|KLHL13	nc|ENSG00000003096|Q9P2N7-2|KLHL13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7817993164062	2	529.781167	1057.54778	0.4777	0.00025307	-1.0285	-0.00054488	-0.55081	-0.00029181	529.7807050797124	49.497	1.236	49.957	49.582	50.818	0.45983					76	29	5	0	0	0	0.41566	1	4862	4862		56.721	3.6321	1	4861500			32812	655	21647	21657	37431	37431					0.021309635057377818
LMTPQELIN	9	Unmodified	_LMTPQELIN_					0	0	0		nc|ENSG00000003096|Q9P2N7-2|KLHL13;ENSG00000003096|ENST00000540167|KLHL13;nc|ENSG00000003096|Q9P2N7-4|KLHL13;nc|ENSG00000003096|Q9P2N7|KLHL13;nc|ENSG00000003096|Q9P2N7-5|KLHL13	nc|ENSG00000003096|Q9P2N7-2|KLHL13	nc|ENSG00000003096|Q9P2N7-2|KLHL13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.783447265625	2	529.781167	1057.54778	0.62859	0.00033302	-1.2624	-0.00066877	-0.63377	-0.00033576	529.7805735433727	49.319	1.5468	50.179	49.642	51.189	0.86044					96	37	4	0	0	0	0.39367	1	4865	4865		58.23	10.27	1	4613700			32813	655	21647	21657	37432	37432					0.021309635057377818
LMVGDLPET	9	Oxidation (M)	_LM(Oxidation (M))VGDLPET_		LM(1)VGDLPET		LM(56)VGDLPET	0	0	1			REV__ENSG00000095951|ENST00000379388|HIVEP1	REV__ENSG00000095951|ENST00000379388|HIVEP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.7442932128906	2	495.74425	989.473948	-1.1263	-0.00055835	1.344	0.00066626	0.21768	0.00010791	495.744686944693	73.751	0.62345	74.139	73.956	74.579	0.38779					25	15	2	0	0	0	0.43338	1	8304	8304		55.504	7.8469	1	538860	+		32814	17071	21648	21658	37433	37433		246			-0.021210046565897755
LMVGDLPET	9	Oxidation (M)	_LM(Oxidation (M))VGDLPET_					0	0	1			REV__ENSG00000095951|ENST00000379388|HIVEP1	REV__ENSG00000095951|ENST00000379388|HIVEP1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	495.74425	989.473948	-1.1263	-0.00055835	1.344	0.00066626	0.21768	0.00010791	495.744686944693	73.751	0.62345	74.139	73.956	74.579	0.38779	-0.034561	0.00072049	NaN	55.504	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	538860	+		32815	17071	21648	21658				246			-0.021210046565897755
LMVPRSIRLQ	10	Unmodified	_LMVPRSIRLQ_					0	0	0			REV__ENST00000485745.1_1_1:151110530-151111906:-|nuORF	REV__ENST00000485745.1_1_1:151110530-151111906:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.7433776855469	3	404.913025	1211.71725	0.2183	8.8391E-05	-0.81008	-0.00032801	-0.59178	-0.00023962	405.2460993756703	27.662	0.078342	27.69	27.647	27.725	0.02817					5	3	2	0	0	0	0.86802	1	1112	1112		27.047	7.0168	1	46963	+		32816	27530	21649	21659	37434	37434					0.11985704578955847
LMVSLHQL	8	Unmodified	_LMVSLHQL_					0	0	0			REV__nc|ENSG00000108389|Q9NYA4|MTMR4	REV__nc|ENSG00000108389|Q9NYA4|MTMR4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7672119140625	2	470.767863	939.521173	-1.9239	-0.00090572	-1.5922	-0.00074958	-3.5162	-0.0016553	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.91472	1	1427	1427		44.117	5.0953	1	93177	+		32817	17707	21650	21660	37435	37435					0.04899319405069491
LMWLPLLPKP	10	Unmodified	_LMWLPLLPKP_					0	0	0			REV__ENST00000361170.6_1_1:156496043-156496265:-|nuORF	REV__ENST00000361170.6_1_1:156496043-156496265:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3640747070312	2	604.367213	1206.71987	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.92	1	112.88	112.38	113.38	-0.032333								0	0	0	0.45132	1	12049	12049		16.473	0	1		+		32818	25491	21651	21661	37436	37436					0.12478159983902515
LMWLTQKG	8	Unmodified	_LMWLTQKG_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1;ENST00000520550.1_1_5:67588878-67591317:+|nuORF;nc|ENSG00000145675|P27986-5|PIK3R1;nc|ENSG00000145675|P27986-3|PIK3R1;nc|ENSG00000145675|P27986-2|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.7471618652344	2	488.767863	975.521173	-0.13533	-6.6143E-05	1.6196	0.00079163	1.4843	0.00072549	488.76848136148067	21.398	0.36698	20.77	20.55	20.917	-0.62835					12	8	2	0	0	0	0.4196	1	765	765		13.775	3.5906	1	27308			32819	4782	21652	21662	37437	37437					0.032433194050668135
LMWMFMAQ	8	2 Oxidation (M)	_LM(Oxidation (M))WMFM(Oxidation (M))AQ_		LM(0.98)WM(0.039)FM(0.98)AQ		LM(17)WM(-17)FM(17)AQ	0	0	2		ENST00000378024.8_2_11:62287553-62287670:-|nuORF	ENST00000378024.8_2_11:62287553-62287670:-|nuORF	ENST00000378024.8_2_11:62287553-62287670:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.2297973632812	2	545.231941	1088.44933	0.0885	4.8253E-05	-0.57749	-0.00031486	-0.48899	-0.00026661	545.231425751193	55.954	0.56541	56.018	55.707	56.273	0.063725					47	26	2	0	0	0	0.92176	1	4699	4699		46.766	6.1938	3	251590			32820	10851	21653	21663	37438	37438		178;179			-0.0913567933532704
LMYKVLEMLKR	11	Unmodified	_LMYKVLEMLKR_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.2784423828125	3	475.276976	1422.8091	-0.65142	-0.0003096	3.6457	0.0017327	2.9943	0.0014231	475.2786104903565	58.659	1.4926	59.051	58.482	59.974	0.39209					112	35	5	0	0	0	0.78683	1	6134	6134		14.086	0.57807	1	2262000	+		32821	18069	21654	21664	37439	37439					0.11460626881103053
LMYTRYFLNK	10	Unmodified	_LMYTRYFLNK_					0	0	0			REV__nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3	REV__nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.7611389160156	3	450.240919	1347.70093	1.0498	0.00047265	-3.8504	-0.0017336	-2.8006	-0.0012609	450.2388829258587	33.455	1.1754	33.666	32.766	33.942	0.21168					52	27	3	0	0	0	0.37624	1	2453	2453		16.717	11.019	1	267870	+		32822	19543	21655	21665	37440	37440					0.0409857862221088
LNAAQEQFG	9	Unmodified	_LNAAQEQFG_					0	0	0		ENSG00000188021|ENST00000338222|UBQLN2	ENSG00000188021|ENST00000338222|UBQLN2	ENSG00000188021|ENST00000338222|UBQLN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.23687744140625	2	489.237981	976.461409	0.45265	0.00022146	-3.6619	-0.0017915	-3.2092	-0.0015701	489.23621768021786	62.918	2.6052	63.04	62.714	65.319	0.12252					281	107	5	0	0	0	0.76255	1	5480	5480		35.618	2.1253	1	3811100			32823	7899	21656	21666	37441	37441					-0.02776280004616183
LNAIGQSY	8	Unmodified	_LNAIGQSY_					0	0	0			REV__nc|ENSG00000178038|Q60I27-2|ALS2CL	REV__nc|ENSG00000178038|Q60I27-2|ALS2CL	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	433.2555236816406	2	433.224342	864.434132	-0.96178	-0.00041666	1.0233	0.0004433	0.061483	2.6636E-05	433.2246349848276	107.3	0.54052	107.3	107.07	107.61	0					19	12	2	0	0	0	0.4196	1	11161	11161		31.955	0	1	260990	+		32824	22249	21657	21667	37442	37442					-0.0035076354499778972
LNAKTVCEGDS	11	Unmodified	_LNAKTVCEGDS_					0	0	0		ENSG00000185888|ENST00000366757|PRSS38	ENSG00000185888|ENST00000366757|PRSS38	ENSG00000185888|ENST00000366757|PRSS38	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.7651977539062	2	568.766245	1135.51794	-0.3787	-0.00021539	-0.9589	-0.00054539	-1.3376	-0.00076078	568.7655911855649	83.939	1.5521	84.374	83.791	85.343	0.43538					92	37	3	0	0	0	0.53361	1	9769	9769		49.536	7.1399	1	1984100			32825	7751	21658	21668	37443	37443					-0.04440020230254049
LNALLHVC	8	Unmodified	_LNALLHVC_					0	0	0		nc|ENSG00000103544|Q7Z3J2-2|VPS35L;ENSG00000103544|ENST00000417362|VPS35L	nc|ENSG00000103544|Q7Z3J2-2|VPS35L	nc|ENSG00000103544|Q7Z3J2-2|VPS35L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.3059387207031	2	441.746931	881.479308	0.30809	0.0001361	4.0074	0.0017703	4.3155	0.0019064	441.74864430867325	19.397	0.72104	18.767	18.401	19.122	-0.6296					25	15	2	0	0	0	0.4196	1	552	552		20.482	0.48506	1	61537			32826	2091	21659	21669	37444	37444					0.03382763716535919
LNAMLDRV	8	Unmodified	_LNAMLDRV_					0	0	0			REV__ENSG00000180182|ENST00000324817|MED14	REV__ENSG00000180182|ENST00000324817|MED14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2532043457031	2	466.25512	930.495686	-1.4677	-0.00068433	-1.5144	-0.00070609	-2.9821	-0.0013904	466.2543190866504	60.961	1.1333	60.992	59.95	61.083	0.0312					73	35	3	0	0	0	0.87479	1	5666	5666		30.504	1.3541	1	265390	+		32827	22379	21660	21670	37445	37445					0.027658448826400672
LNAQKKKN	8	Unmodified	_LNAQKKKN_					0	0	0		nc|ENSG00000145949|Q86YV6-2|MYLK4;ENSG00000145949|ENST00000274643|MYLK4	nc|ENSG00000145949|Q86YV6-2|MYLK4	nc|ENSG00000145949|Q86YV6-2|MYLK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.28753662109375	2	472.287808	942.561064	1.4182	0.00066978	-1.3444	-0.00063493	0.07378	3.4846E-05	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.84341	1	11551	11551		24.203	0	1	21289000			32828	4806	21661	21671	37446	37446					0.0874858239999412
LNDHDAVTK	9	Unmodified	_LNDHDAVTK_					0	0	0		nc|ENSG00000134532|P35711-3|SOX5;nc|ENSG00000134532|P35711-2|SOX5;nc|ENSG00000134532|P35711-5|SOX5;ENSG00000134532|ENST00000451604|SOX5	nc|ENSG00000134532|P35711-3|SOX5	nc|ENSG00000134532|P35711-3|SOX5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7542724609375	2	506.756538	1011.49852	-0.14296	-7.2445E-05	0.38477	0.00019498	0.24181	0.00012254	506.7565004715063	23.302	0.58158	23.25	22.906	23.487	-0.052113					37	19	3	0	0	0	0.41984	2	829	823;829		56.434	1.6575	1	63577			32829	3940	21662	21672	37447;37448	37448					-0.006766084588662125
LNDRASVLY	9	Unmodified	_LNDRASVLY_					0	0	0		ENST00000307714.12_1_1:32503693-32508222:+|nuORF	ENST00000307714.12_1_1:32503693-32508222:+|nuORF	ENST00000307714.12_1_1:32503693-32508222:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.7833251953125	2	525.782556	1049.55056	-0.2585	-0.00013591	-0.31346	-0.00016481	-0.57195	-0.00030072	525.7823128170928	49.629	0.70844	49.605	49.235	49.943	-0.024029					34	15	3	0	0	0	0.55097	1	4243	4243		49.442	5.3247	1	247480			32830	9875	21663	21673	37449	37449					0.027765549549030766
LNDWVAVH	8	Unmodified	_LNDWVAVH_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.2467346191406	2	477.245609	952.476666	-0.8935	-0.00042642	3.015	0.0014389	2.1215	0.0010125	477.2468568382562	68.342	1.3917	68.478	67.814	69.206	0.13522					122	54	3	0	0	0	0.91005	1	6100	6100		42.474	3.6683	1	604720			32831	6740	21664	21674	37450	37450					-0.0014736841676494805
LNEAEGKAIKL	11	Unmodified	_LNEAEGKAIKL_					0	0	0		nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11	nc|ENSG00000133392|P35749-4|MYH11	nc|ENSG00000133392|P35749-4|MYH11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.3446044921875	2	593.34552	1184.67649	0.88436	0.00052473	-2.7449	-0.0016287	-1.8605	-0.0011039	593.343785503265	103.21	2.4131	103.4	103.04	105.46	0.18297					159	60	4	0	0	0	0.69995	1	10988	10988		31.53	1.2121	1	4232500			32832	14928	21665	21675	37451	37451					0.09153641740317653
LNEFRAKLSK	10	Unmodified	_LNEFRAKLSK_					0	0	0		ENST00000490313.1_1_6:57244770-57299810:+|nuORF;ENST00000419977.4_1_6:57182469-57246993:+|nuORF;ENSG00000146143|ENST00000615550|PRIM2	ENST00000490313.1_1_6:57244770-57299810:+|nuORF	ENST00000490313.1_1_6:57244770-57299810:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.80389404296875	3	402.571545	1204.69281	-0.033719	-1.3574E-05	-1.9434	-0.00078237	-1.9772	-0.00079595	402.5707857282378	19.283	0.22089	18.653	18.49	18.711	-0.62961					7	4	2	0	0	0	0.37624	1	503	503		12.957	3.3113	1	16597			32833	4822	21666	21676	37452	37452					0.09864767697081334
LNELIFKLSK	10	Unmodified	_LNELIFKLSK_					0	0	0			REV__nc|ENSG00000211696|A0A0C4DH27|TRGV8	REV__nc|ENSG00000211696|A0A0C4DH27|TRGV8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7059326171875	3	402.24818	1203.72271	1.6661	0.00067019	-3.3863	-0.0013622	-1.7202	-0.00069196	402.2468586489293	25.033	0.76577	24.705	24.206	24.972	-0.32825					28	16	3	0	0	0	0.37624	1	1278	1278		20.837	0.52214	1	93972	+		32834	30183	21667	21677	37453	37453					0.1289970664242901
LNELKPRKER	10	Unmodified	_LNELKPRKER_					0	0	0			REV__nc|ENSG00000065613|Q9H2G2-2|SLK	REV__nc|ENSG00000065613|Q9H2G2-2|SLK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8826904296875	2	641.883136	1281.75172	-1.1529	-0.00074004	0.033515	2.1513E-05	-1.1194	-0.00071853	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.86047	1	9927	9927		23.523	0.94304	1	3521600	+		32835	16506	21668	21678	37454	37454					0.12211243991396259
LNEYLKTKTV	10	Unmodified	_LNEYLKTKTV_					0	0	0		ENSG00000136010|ENST00000258494|ALDH1L2	ENSG00000136010|ENST00000258494|ALDH1L2	ENSG00000136010|ENST00000258494|ALDH1L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.8464965820312	2	604.847896	1207.68124	0.86371	0.00052241	-3.6209	-0.0021901	-2.7572	-0.0016677	604.8455885108707	95.989	2.9552	96.152	95.152	98.107	0.16316					193	69	4	0	0	0	0.8651	1	9922	9922		25.574	7.312	1	723950			32836	4080	21669	21679	37455	37455					0.08570525883101254
LNFAAVIYVRI	11	Unmodified	_LNFAAVIYVRI_					0	0	0			REV__ENSG00000214814|ENST00000522917|FER1L6	REV__ENSG00000214814|ENST00000522917|FER1L6	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	639.87939453125	2	639.882073	1277.74959	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.534	1	28.556	28.056	29.056	0.021948								0	0	0	0.56276	1	1176	1176		32.812	4.7309	1		+		32837	23665	21670	21680	37456	37456					0.12182815253595436
LNFELLFY	8	Unmodified	_LNFELLFY_					0	0	0		ENST00000535549.5_1_11:128331948-128332230:-|nuORF	ENST00000535549.5_1_11:128331948-128332230:-|nuORF	ENST00000535549.5_1_11:128331948-128332230:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.384033203125	2	529.781493	1057.54843	-0.19587	-0.00010377	-1.1595	-0.0006143	-1.3554	-0.00071807	530.2847101066413	24.836	0.14423	24.894	24.836	24.981	0.058167					9	6	2	0	0	0	0.4196	1	879	879		25.45	10.585	1	38512			32838	13424	21671	21681	37457	37457					0.021961262171089402
LNFSPWGAKW	10	Unmodified	_LNFSPWGAKW_					0	0	0			REV__ENST00000482751.5_1_1:40208803-40219024:+|nuORF	REV__ENST00000482751.5_1_1:40208803-40219024:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.2123107910156	3	402.541586	1204.60293	0.20149	8.1107E-05	-3.0113	-0.0012122	-2.8098	-0.0011311	402.5402224034807	29.662	0.88693	29.693	29.456	30.343	0.030945					51	23	3	0	0	0	0.37624	1	1493	1493		59.931	19.873	1	102600	+		32839	27472	21672	21682	37458	37458					0.00881138088516309
LNGCPFYG	8	Unmodified	_LNGCPFYG_					0	0	0			REV__nc|ENSG00000133105|Q8WXD0-2|RXFP2	REV__nc|ENSG00000133105|Q8WXD0-2|RXFP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7802734375	2	435.694364	869.374174	0.45013	0.00019612	2.5842	0.0011259	3.0344	0.0013221	435.6953252417568	33.954	0.45758	34.164	33.861	34.319	0.21002					13	10	2	0	0	0	0.4196	1	2443	2443		26.796	0	1	47454	+		32840	15564	21673	21683	37459	37459					-0.06573777479889031
LNGEWCVG	8	Unmodified	_LNGEWCVG_					0	0	0		chr1:45606079-45606482|14|22.29|0.29|6.25|+|0|None,NASP|1	chr1:45606079-45606482|14|22.29|0.29|6.25|+|0|None,NASP|1	chr1:45606079-45606482|14|22.29|0.29|6.25|+|0|None,NASP|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.1985778808594	2	439.19727	876.379988	1.5969	0.00070133	2.8929	0.0012705	4.4897	0.0019719	439.19857818197687	98.114	0.57803	98.49	98.246	98.824	0.37679					34	13	4	0	0	0	0.87922	1	11854	11854		31.955	3.7006	1	433670			32841	52	21674	21684	37460	37460					-0.0631467896820368
LNGEWCVG	8	Unmodified	_LNGEWCVG_					0	0	0		chr1:45606079-45606482|14|22.29|0.29|6.25|+|0|None,NASP|1	chr1:45606079-45606482|14|22.29|0.29|6.25|+|0|None,NASP|1	chr1:45606079-45606482|14|22.29|0.29|6.25|+|0|None,NASP|1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	439.19727	876.379988	1.1773	0.00051708	2.2732	0.00099838	3.4505	0.0015155	439.1987610923765	98.078	0.8196	98.464	98.22	99.04	0.38548	-0.013195	-0.00039476	NaN	31.955	34	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	364480			32842	52	21674	21684							-0.0631467896820368
LNGHAMCQTK	10	Unmodified	_LNGHAMCQTK_					0	0	0		ENSG00000158859|ENST00000367996|ADAMTS4;nc|ENSG00000158859|O75173-2|ADAMTS4	ENSG00000158859|ENST00000367996|ADAMTS4	ENSG00000158859|ENST00000367996|ADAMTS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.26318359375	2	551.760243	1101.50593	-0.37301	-0.00020581	3.3263	0.0018353	2.9533	0.0016295	551.7618561674817	58.58	0.6534	58.613	58.4	59.054	0.033905					49	22	3	0	0	0	0.73395	1	5407	5407		42.864	1.4377	1	181420			32843	5500	21675	21685	37461	37461					-0.04075915454450296
LNGIQFYER	9	Unmodified	_LNGIQFYER_					0	0	0		nc|ENSG00000164889|P04920-2|SLC4A2;nc|ENSG00000164889|P04920-3|SLC4A2;ENSG00000164889|ENST00000413384|SLC4A2	nc|ENSG00000164889|P04920-2|SLC4A2	nc|ENSG00000164889|P04920-2|SLC4A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.2958984375	2	570.29583	1138.57711	0.47185	0.0002691	-0.81541	-0.00046502	-0.34356	-0.00019593	570.2951038965308	61.928	0.56001	62.035	61.772	62.332	0.10743					50	24	3	0	0	0	0.44421	1	5395	5395		54.776	0	1	602680			32844	6017	21676	21686	37462	37462					0.013362438462309001
LNGKTGMFPS	10	Unmodified	_LNGKTGMFPS_					0	0	0		ENSG00000147010|ENST00000397821|SH3KBP1;nc|ENSG00000147010|Q96B97-2|SH3KBP1	ENSG00000147010|ENST00000397821|SH3KBP1	ENSG00000147010|ENST00000397821|SH3KBP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3247680664062	2	526.265684	1050.51682	0.46747	0.00024601	-4.2231	-0.0022225	-3.7556	-0.0019764	526.2630989847356	60.887	0.72538	61.006	60.417	61.143	0.11901					45	30	2	0	0	0	0.37624	1	5224	5224		8.6937	7.6968	1	92872			32845	4874	21677	21687	37463	37463					-0.00642189808513649
LNGKTGMFPS	10	Unmodified	_LNGKTGMFPS_					0	0	0		ENSG00000147010|ENST00000397821|SH3KBP1;nc|ENSG00000147010|Q96B97-2|SH3KBP1	ENSG00000147010|ENST00000397821|SH3KBP1	ENSG00000147010|ENST00000397821|SH3KBP1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	526.265684	1050.51682	-1.1935	-0.0006281	-2.327	-0.0012246	-3.5205	-0.0018527	526.264041600794	60.995	0.20677	60.995	60.888	61.095	0	-0.008046	0.0012749	NaN	8.6937	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48031			32846	4874	21677	21687							-0.00642189808513649
LNGLAGPTVM	10	Unmodified	_LNGLAGPTVM_					0	0	0		nc|ENSG00000138463|Q96SL1-2|SLC49A4;ENSG00000138463|ENST00000261038|SLC49A4;ENST00000477647.1_1_3:122514002-122598222:+|nuORF	nc|ENSG00000138463|Q96SL1-2|SLC49A4	nc|ENSG00000138463|Q96SL1-2|SLC49A4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.7907409667969	2	486.762778	971.511002	0.91558	0.00044567	-0.80144	-0.00039011	0.11414	5.5559E-05	486.76188908016763	33.409	0.46262	33.621	33.397	33.859	0.21168					19	10	3	0	0	0	0.37624	1	2452	2452		31.53	14.165	1	96029			32847	4299	21678	21688	37464	37464					0.024107116798290917
LNGLKRFF	8	Unmodified	_LNGLKRFF_					0	0	0			REV__nc|ENSG00000162819|Q5VW32-2|BROX	REV__nc|ENSG00000162819|Q5VW32-2|BROX	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.79547119140625	2	497.795269	993.575986	-1.5169	-0.00075511	2.6411	0.0013147	1.1242	0.00055963	497.7963799927103	49.017	1.345	49.017	48.626	49.971	0					75	31	3	0	0	0	0.884	1	3860	3860		33.516	3.674	1	491380	+		32848	20852	21679	21689	37465	37465					0.0789407426799471
LNGLKRFF	8	Unmodified	_LNGLKRFF_					0	0	0			REV__nc|ENSG00000162819|Q5VW32-2|BROX	REV__nc|ENSG00000162819|Q5VW32-2|BROX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.79534912109375	2	497.795269	993.575986	-0.66885	-0.00033295	1.9666	0.00097898	1.2978	0.00064603	497.7958642477004	48.816	1.5297	48.791	47.88	49.41	-0.025112					123	35	4	0	0	0	0.884	1	4172	4172		33.516	5.2613	1	502690	+		32849	20852	21679	21689	37466	37466					0.0789407426799471
LNGLKRFF	8	Unmodified	_LNGLKRFF_					0	0	0			REV__nc|ENSG00000162819|Q5VW32-2|BROX	REV__nc|ENSG00000162819|Q5VW32-2|BROX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.7962341308594	2	497.795269	993.575986	0.32848	0.00016352	0.8359	0.0004161	1.1644	0.00057962	497.7954109844358	48.391	0.87605	48.429	47.96	48.836	0.037731					54	21	3	0	0	0	0.85277	1	3676	3676		25.45	0.94616	1	407880	+		32850	20852	21679	21689	37467	37467					0.0789407426799471
LNGLKRFF	8	Unmodified	_LNGLKRFF_					0	0	0			REV__nc|ENSG00000162819|Q5VW32-2|BROX	REV__nc|ENSG00000162819|Q5VW32-2|BROX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7953186035156	2	497.795269	993.575986	-0.92593	-0.00046092	2.0701	0.0010305	1.1441	0.00056954	497.79610236473553	46.294	0.72507	47.217	46.794	47.519	0.92315					52	17	4	0	0	0	0.90465	1	4360	4360		40.573	7.057	1	1386700	+		32851	20852	21679	21689	37468	37468					0.0789407426799471
LNGLLTVLYV	10	Unmodified	_LNGLLTVLYV_					0	0	0			REV__ENSG00000255223|ENST00000528616|OR5M11	REV__ENSG00000255223|ENST00000528616|OR5M11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8338012695312	2	552.8368	1103.65905	-0.71064	-0.00039287	-4.0102	-0.002217	-4.7209	-0.0026099	552.8343973070275	84.083	2.0319	84.083	83.586	85.618	0					122	47	3	0	0	0	0.86763	1	7932	7932		26.693	3.6504	1	300740	+		32852	23895	21680	21690	37469	37469					0.11136346205330483
LNGMKLTK	8	Unmodified	_LNGMKLTK_					0	0	0			REV__ENSG00000187527|ENST00000342358|ATP13A5	REV__ENSG00000187527|ENST00000342358|ATP13A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.7680969238281	2	452.767863	903.521173	0.72574	0.00032859	0.40066	0.00018141	1.1264	0.00051	452.7680266771095	29.969	1.2555	29.954	29.325	30.581	-0.015167					53	34	3	0	0	0	0.89494	1	1544	1544		37.159	6.6555	1	76935	+		32853	22920	21681	21691	37470	37470					0.065553194050608
LNGPVRRQRR	10	Unmodified	_LNGPVRRQRR_					0	0	0			REV__ENSG00000187730|ENST00000378585|GABRD	REV__ENSG00000187730|ENST00000378585|GABRD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.9223937988281	3	417.921683	1250.74322	0.73411	0.0003068	0.67992	0.00028415	1.414	0.00059095	417.9219647760214	105.64	2.8346	105.75	104.94	107.78	0.10766					247	69	5	0	0	0	0.85466	1	11206	11206		14.694	0	1	29053000	+		32854	22939	21682	21692	37471	37471					0.1278773486544651
LNGSIQQITVI	11	Unmodified	_LNGSIQQITVI_					0	0	0		ENSG00000033178|ENST00000322244|UBA6;nc|ENSG00000033178|A0AVT1-4|UBA6;ENST00000429659.7_1_4:68529542-68566852:-|nuORF;nc|ENSG00000033178|A0AVT1-3|UBA6	ENSG00000033178|ENST00000322244|UBA6	ENSG00000033178|ENST00000322244|UBA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	593.3438720703125	2	593.34552	1184.67649	-0.61427	-0.00036447	-1.2195	-0.00072357	-1.8337	-0.001088	593.3447041008176	103.62	2.4136	103.61	103.22	105.64	-0.0035706					155	57	4	0	0	0	0.732	1	11189	11189		26.063	0.9374	1	2207400			32855	891	21683	21693	37472	37472					0.09153641740294916
LNGTVFAF	8	Unmodified	_LNGTVFAF_					0	0	0			REV__ENSG00000158006|ENST00000374282|PAFAH2	REV__ENSG00000158006|ENST00000374282|PAFAH2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801513671875	2	434.731803	867.449054	1.8105	0.0007871	-0.5122	-0.00022267	1.2983	0.00056443	434.7302242212658	36.196	0.17107	36.636	36.573	36.745	0.44043					5	3	2	0	0	0	0.4196	1	2851	2851		31.955	0	1	37452	+		32856	20578	21684	21694	37473	37473					0.010027283229987916
LNIGDWSF	8	Unmodified	_LNIGDWSF_					0	0	0			REV__nc|ENSG00000159784|Q86XD5|FAM131B	REV__nc|ENSG00000159784|Q86XD5|FAM131B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.22918701171875	2	476.232168	950.449782	0.09412	4.4823E-05	-3.8686	-0.0018423	-3.7745	-0.0017975	476.230244721266	24.762	0.49541	24.862	24.621	25.117	0.10045					44	24	2	0	0	0	0.9295	1	866	866		55.504	2.1528	1	134830	+		32857	20682	21685	21695	37474	37474					-0.02742477027948098
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.778564453125	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.88915	1	2685	2685		35.201	4.6971	1	2581600			32858	1328	21686	21696	37475	37475					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7798767089844	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.88915	1	3864	3864		35.201	1.6851	1	2017500			32859	1328	21686	21696	37476	37476					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801818847656	2	434.778754	867.542954	0.023581	1.0252E-05	2.6379	0.0011469	2.6615	0.0011571	434.7797629333649	48.108	2.6391	48.098	47.574	50.213	-0.0093269					205	68	4	0	0	0	0.86288	1	3928	3928		26.796	1.3459	1	2315200			32860	1328	21686	21696	37477	37477					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7794189453125	2	434.778754	867.542954	-1.3516	-0.00058764	3.9223	0.0017053	2.5707	0.0011177	434.78034506978366	39.667	1.8641	39.623	39.121	40.985	-0.043697					176	46	5	0	0	0	0.86791	1	3017	3017		28.254	1.4582	1	3943300			32861	1328	21686	21696	37478	37478					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796325683594	2	434.778754	867.542954	-1.2494	-0.00054321	3.5325	0.0015359	2.2831	0.00099266	434.7801616022163	41.477	1.7868	41.436	40.922	42.709	-0.04081					147	45	4	0	0	0	0.87922	1	3260	3260		31.955	1.4512	1	2800900			32862	1328	21686	21696	37479	37479					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77978515625	2	434.778754	867.542954	-1.1228	-0.00048815	3.4102	0.0014827	2.2874	0.00099453	434.7801032015678	43.351	2.0206	43.315	42.595	44.616	-0.035816					155	47	4	0	0	0	0.91005	1	3377	3377		42.474	1.9018	1	2016300			32863	1328	21686	21696	37480	37480					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.78009033203125	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.88915	1	2208	2208		35.201	1.6851	1	3951300			32864	1328	21686	21696	37481	37481					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7792663574219	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.88915	1	2991	2991		35.201	0	1	2766200			32865	1328	21686	21696	37482	37482					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7795715332031	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.88915	1	3388	3388		35.201	1.6851	1	2165200			32866	1328	21686	21696	37483	37483					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7797546386719	2	434.778754	867.542954	1.0906	0.00047416	1.4824	0.00064451	2.573	0.0011187	434.77927379886756	45.133	1.9101	45.129	44.288	46.198	-0.0041618					129	44	4	0	0	0	0.88915	1	3596	3596		35.201	0	1	1333000			32867	1328	21686	21696	37484	37484					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801208496094	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.87922	1	2036	2036		31.955	0	1	4737100			32868	1328	21686	21696	37485	37485					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7800598144531	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.88915	1	2252	2252		35.201	1.6851	1	2486400			32869	1328	21686	21696	37486	37486					0.10388447425282266
LNIIISVP	8	Unmodified	_LNIIISVP_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7791748046875	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.86288	1	3734	3734		26.796	2.5934	1	6567600			32870	1328	21686	21696	37487	37487					0.10388447425282266
LNIPVLTV	8	Unmodified	_LNIPVLTV_					0	0	0		ENSG00000138760|ENST00000264896|SCARB2	ENSG00000138760|ENST00000264896|SCARB2	ENSG00000138760|ENST00000264896|SCARB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7802429199219	2	434.778754	867.542954	0.13638	5.9295E-05	3.2501	0.0014131	3.3864	0.0014724	434.7800361226264	34.243	0.88012	34.352	33.821	34.701	0.10829					118	39	4	0	0	0	0.884	1	1706	1706		33.516	6.7195	1	2838300			32871	4328	21687	21697	37488	37488					0.10388447425282266
LNITQLRVL	9	Unmodified	_LNITQLRVL_					0	0	0			REV__ENSG00000066557|ENST00000370952|LRRC40	REV__ENSG00000066557|ENST00000370952|LRRC40	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.1693725585938	2	535.340041	1068.66553	0.13599	7.2803E-05	2.144	0.0011478	2.28	0.0012206	535.3429006944259	22.99	0.14184	23.078	23.017	23.159	0.088013					8	6	2	0	0	0	0.20789	1	724	724		27.882	0	1	27907	+		32872	16525	21688	21698	37489	37489					0.1339428415672046
LNITVIKAPRE	11	Unmodified	_LNITVIKAPRE_					0	0	0		ENSG00000179639|ENST00000693622|FCER1A	ENSG00000179639|ENST00000693622|FCER1A	ENSG00000179639|ENST00000693622|FCER1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.8871459960938	2	627.382437	1252.75032	-0.21917	-0.0001375	0.84427	0.00052968	0.6251	0.00039218	627.3827536710313	113.14	0.55793	113.07	112.73	113.28	-0.067215					52	23	3	0	0	0	0.74763	1	12253	12253		22.58	1.6327	1	140420			32873	7287	21689	21699	37490	37490					0.1340560990265658
LNIVRKPLLEE	11	Unmodified	_LNIVRKPLLEE_					0	0	0			REV__ENSG00000186575|ENST00000338641|NF2	REV__ENSG00000186575|ENST00000338641|NF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.9391174316406	3	441.938005	1322.79219	-0.1083	-4.7863E-05	4.2281	0.0018686	4.1198	0.0018207	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.75121	1	4935	4935		21.78	0.094677	1	447080	+		32874	22865	21690	21700	37491	37491					0.1437016559118547
LNIYNLYAP	9	Unmodified	_LNIYNLYAP_					0	0	0		ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000064601|P10619-2|CTSA;ENST00000480961.1_1_20:44522693-44523773:+|nuORF	ENSG00000064601|ENST00000646241|CTSA	ENSG00000064601|ENST00000646241|CTSA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.2344970703125	2	540.78985	1079.56515	0.81207	0.00043916	-2.4556	-0.0013279	-1.6435	-0.00088878	540.7882240286207	27.85	0.61272	27.595	27.196	27.809	-0.25465					19	13	2	0	0	0	0.20789	1	1597	1597		16.473	0.83134	1	89466			32875	1105	21691	21701	37492	37492					0.028546271030336356
LNIYNLYAP	9	Unmodified	_LNIYNLYAP_					0	0	0		ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000064601|P10619-2|CTSA;ENST00000480961.1_1_20:44522693-44523773:+|nuORF	ENSG00000064601|ENST00000646241|CTSA	ENSG00000064601|ENST00000646241|CTSA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	540.78985	1079.56515	-1.0417	-0.00056333	-1.2568	-0.00067969	-2.2985	-0.001243	540.7890028749672	27.758	0.57098	27.661	27.403	27.974	-0.096947	0.0331	0.00052996	NaN	10.866	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110010			32876	1105	21691	21701							0.028546271030336356
LNKAIFYYY	9	Unmodified	_LNKAIFYYY_					0	0	0			REV__ENSG00000126010|ENST00000380289|GRPR	REV__ENSG00000126010|ENST00000380289|GRPR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8116455078125	2	597.813325	1193.6121	0.87517	0.00052319	-1.8533	-0.0011079	-0.9781	-0.00058472	597.812269368564	60.99	0.38808	61.09	60.747	61.135	0.10082					26	15	2	0	0	0	0.72402	1	5279	5279		38.806	3.1879	1	135010	+		32877	18691	21692	21702	37493	37493					0.023034866542047894
LNKAIFYYY	9	Unmodified	_LNKAIFYYY_					0	0	0			REV__ENSG00000126010|ENST00000380289|GRPR	REV__ENSG00000126010|ENST00000380289|GRPR	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	597.813325	1193.6121	0.87517	0.00052319	-1.8533	-0.0011079	-0.9781	-0.00058472	597.812269368564	60.99	0.38808	61.09	60.747	61.135	0.10082	-0.0047064	-0.00049976	NaN	38.806	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135010	+		32878	18691	21692	21702							0.023034866542047894
LNKAIFYYY	9	Unmodified	_LNKAIFYYY_					0	0	0			REV__ENSG00000126010|ENST00000380289|GRPR	REV__ENSG00000126010|ENST00000380289|GRPR	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	597.813325	1193.6121	-0.33775	-0.00020191	-0.39859	-0.00023828	-0.73634	-0.00044019	598.3147881031599	61.092	0.32168	61.1	60.806	61.127	0.0081177	0.0047064	0.0012395	NaN	38.806	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134670	+		32879	18691	21692	21702							0.023034866542047894
LNKEERIPLKN	11	Unmodified	_LNKEERIPLKN_					0	0	0		L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|29|2|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|29|2|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|29|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9326171875	3	451.933143	1352.7776	-1.2099	-0.00054677	0.20074	9.0723E-05	-1.0091	-0.00045605	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.72892	1	10403	10403		26.75	0	1	1176100			32880	14587	21693	21703	37494	37494					0.11532093443042868
LNKGKKLIHCR	11	Unmodified	_LNKGKKLIHCR_					0	0	0		ENST00000504674.1_1_5:39719286-39719799:-|nuORF	ENST00000504674.1_1_5:39719286-39719799:-|nuORF	ENST00000504674.1_1_5:39719286-39719799:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2674865722656	3	437.267691	1308.78124	-1.7045	-0.00074531	2.1603	0.00094462	0.45581	0.00019931	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.74771	1	4391	4391		22.562	0	1	3449100			32881	12908	21694	21704	37495	37495					0.13920484735899663
LNKGKLIIPTG	11	Unmodified	_LNKGKLIIPTG_					0	0	0			REV__ENSG00000221866|ENST00000321063|PLXNA4	REV__ENSG00000221866|ENST00000321063|PLXNA4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3670043945312	2	577.368798	1152.72304	-0.31736	-0.00018324	-3.4769	-0.0020075	-3.7943	-0.0021907	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.66929	2	10594	10533;10594		36.447	1.2121	1	6617600	+		32882	23709	21695	21705	37496;37497	37497					0.1527912636227029
LNKGRIRRKM	10	Unmodified	_LNKGRIRRKM_					0	0	0			REV__ENST00000511884.6_2_4:31144506-31144551:+|nuORF	REV__ENST00000511884.6_2_4:31144506-31144551:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	636.3998413085938	2	636.39569	1270.77683	1.4181	0.00090245	2.0347	0.0012948	3.4527	0.0021973	636.3968876400421	101.52	0.88153	101.56	101.3	102.18	0.044823					40	20	3	0	0	0	0.85694	1	10964	10964		21.96	1.9631	1	385150	+		32883	27974	21696	21706	37498	37498					0.15227020312977402
LNKIHLFLVL	10	Unmodified	_LNKIHLFLVL_					0	0	0			REV__ENSG00000085265|ENST00000371806|FCN1	REV__ENSG00000085265|ENST00000371806|FCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9295959472656	3	403.928781	1208.76451	0.5143	0.00020774	0.81845	0.0003306	1.3327	0.00053833	403.92898888715627	45.158	1.872	45.621	44.495	46.367	0.46313					165	45	4	0	0	0	0.85441	1	4220	4220		20.837	2.3061	1	5214800	+		32884	16885	21697	21707	37499	37499					0.16848307121586004
LNKIMCNT	8	Unmodified	_LNKIMCNT_					0	0	0			REV__ENSG00000122970|ENST00000242591|IFT81	REV__ENSG00000122970|ENST00000242591|IFT81	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7237243652344	2	468.735706	935.456858	-0.58384	-0.00027366	2.6757	0.0012542	2.0919	0.00098054	468.73630640655836	76.942	0.23895	77.51	77.379	77.618	0.56836					8	5	2	0	0	0	0.4196	1	8760	8760		21.96	0	1	182980	+		32885	18522	21698	21708	37500	37500					-0.01345203743392176
LNKKNICKV	9	Unmodified	_LNKKNICKV_					0	0	0			REV__ENSG00000177169|ENST00000321867|ULK1	REV__ENSG00000177169|ENST00000321867|ULK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.3057861328125	2	530.320794	1058.62703	1.1013	0.00058405	1.5691	0.00083215	2.6705	0.0014162	530.3215775384817	33.668	0.41195	33.973	33.829	34.241	0.30495					11	9	2	0	0	0	0.20789	1	2473	2473		30.504	1.3541	1	74152	+		32886	22186	21699	21709	37501	37501					0.10006655250526819
LNKMKHKF	8	Unmodified	_LNKMKHKF_					0	0	0			REV__ENST00000457262.1_1_10:43062145-43062928:+|nuORF	REV__ENST00000457262.1_1_10:43062145-43062928:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.7933349609375	2	523.302404	1044.59026	0.97888	0.00051225	1.3566	0.00070991	2.3355	0.0012222	523.3030545691491	18.747	1.0942	18.672	18.186	19.28	-0.074974					53	42	2	0	0	0	0.4196	1	399	399		12.959	6.2236	1	52099	+		32887	17142	21700	21710	37502	37502					0.06974403424624143
LNKMKHKF	8	Unmodified	_LNKMKHKF_					0	0	0			REV__ENST00000457262.1_1_10:43062145-43062928:+|nuORF	REV__ENST00000457262.1_1_10:43062145-43062928:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3036499023438	2	523.302404	1044.59026	0.60955	0.00031898	1.6956	0.0008873	2.3051	0.0012063	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.87922	1	10130	10130		31.955	1.4512	1	4023800	+		32888	17142	21700	21710	37503	37503					0.06974403424624143
LNLFAYGTY	9	Unmodified	_LNLFAYGTY_					0	0	0		ENST00000466901.5_1_2:232653280-232656595:+|nuORF;ENSG00000144524|ENST00000350033|COPS7B;nc|ENSG00000144524|Q9H9Q2-3|COPS7B	ENST00000466901.5_1_2:232653280-232656595:+|nuORF	ENST00000466901.5_1_2:232653280-232656595:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2669677734375	2	531.26875	1060.52295	-0.19781	-0.00010509	-3.5451	-0.0018834	-3.743	-0.0019885	531.2667161695381	45.104	0.77737	45.567	45.264	46.041	0.46313					40	18	3	0	0	0	0.43338	1	4179	4179		55.504	7.5886	1	1576900			32889	4715	21701	21711	37504	37504					-0.004893483053365344
LNLGQKGN	8	Unmodified	_LNLGQKGN_					0	0	0		nc|ENSG00000127329|P23467-4|PTPRB;nc|ENSG00000127329|P23467-2|PTPRB;nc|ENSG00000127329|P23467|PTPRB;ENSG00000127329|ENST00000334414|PTPRB	nc|ENSG00000127329|P23467-4|PTPRB	nc|ENSG00000127329|P23467-4|PTPRB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.23883056640625	2	422.237784	842.461016	1.7913	0.00075635	1.5592	0.00065835	3.3505	0.0014147	422.2383363429697	70.18	1.527	70.215	69.949	71.476	0.035622					112	79	2	0	0	0	0.87479	1	6742	6742		30.504	0	1	383600			32890	3492	21702	21712	37505	37505					0.033483450661947245
LNLKKEGLRVV	11	Unmodified	_LNLKKEGLRVV_					0	0	0		nc|ENSG00000197062|Q16670|ZSCAN26;ENSG00000197062|ENST00000421553|ZSCAN26	nc|ENSG00000197062|Q16670|ZSCAN26	nc|ENSG00000197062|Q16670|ZSCAN26	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.376708984375	2	634.906079	1267.79761	1.34	0.00085075	0.70509	0.00044767	2.0451	0.0012984	634.9065868384587	113.78	1.1919	113.81	113.14	114.34	0.027321					50	32	2	0	0	0	0.17318	1	12508	12508		19.104	0	1	122240			32891	8129	21703	21713	37506	37506					0.1744188917361953
LNLKKLLS	8	Unmodified	_LNLKKLLS_					0	0	0		nc|ENSG00000103194|Q14694-2|USP10;ENSG00000103194|ENST00000219473|USP10;nc|ENSG00000103194|Q14694-3|USP10	nc|ENSG00000103194|Q14694-2|USP10	nc|ENSG00000103194|Q14694-2|USP10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.8055725097656	2	464.813128	927.611703	-0.90279	-0.00041963	0.81321	0.00037799	-0.089586	-4.1641E-05	464.8133693896696	36.974	1.0655	36.92	36.515	37.581	-0.053558					46	23	3	0	0	0	0.5397	1	2508	2508		73.975	2.679	1	409780			32892	14825	21704	21714	37507	37507					0.1450011172498762
LNLKKSLL	8	Unmodified	_LNLKKSLL_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP;ENST00000238112.7_1_2:9583653-9583701:+|nuORF	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.8072814941406	2	464.813128	927.611703	-0.90279	-0.00041963	0.81321	0.00037799	-0.089586	-4.1641E-05	464.8133693896696	36.974	1.0655	36.92	36.515	37.581	-0.053558					46	23	3	0	0	0	0.37266	2	2497	2486;2497		97.473	10.664	1	409780			32893	1742	21705	21715	37508;37509	37509					0.1450011172498762
LNLKVKGQY	9	Unmodified	_LNLKVKGQY_					0	0	0		L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|50|2|sense	L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|50|2|sense	L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|50|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8174438476562	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.64922	1	8171	8171		44.117	4.864	1	859730			32894	14554	21706	21716	37510	37510					0.09498308748334239
LNLLFLCYPF	10	Unmodified	_LNLLFLCYPF_					0	0	0		ENST00000468135.5_1_1:32542241-32568271:+|nuORF;ENSG00000121775|ENST00000336294|TMEM39B;nc|ENSG00000121775|Q9GZU3-3|TMEM39B;ENST00000476968.5_1_1:32540652-32561345:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.8314208984375	2	621.833203	1241.65185	-0.059885	-3.7238E-05	-0.63177	-0.00039285	-0.69165	-0.00043009	621.8326229533526	64.162	0.85619	64.549	64.178	65.034	0.3868					35	19	2	0	0	0	0.84112	1	6933	6933		37.159	0	1	377770			32895	3198	21707	21717	37511	37511					0.0406929033324559
LNLLNSLLPLE	11	Unmodified	_LNLLNSLLPLE_					0	0	0		ENST00000532317.5_1_11:85669958-85670087:-|nuORF	ENST00000532317.5_1_11:85669958-85670087:-|nuORF	ENST00000532317.5_1_11:85669958-85670087:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8698120117188	2	619.871371	1237.72819	-0.30615	-0.00018977	-2.7556	-0.0017081	-3.0618	-0.0018979	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.73893	1	10191	10191		24.519	2.8334	1	4796900			32896	13374	21708	21718	37512	37512					0.11883385434225602
LNLLRFFPK	9	Unmodified	_LNLLRFFPK_					0	0	0			REV__ENSG00000180900|ENST00000356994|SCRIB	REV__ENSG00000180900|ENST00000356994|SCRIB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.355712890625	2	574.352951	1146.69135	2.697	0.001549	2.452	0.0014083	5.149	0.0029574	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.78983	1	10747	10747		27.882	6.9353	1	738540	+		32897	22423	21709	21719	37513	37513					0.12387178398989818
LNLLRNLLN	9	Unmodified	_LNLLRNLLN_					0	0	0			REV__ENSG00000072657|ENST00000261180|TRHDE	REV__ENSG00000072657|ENST00000261180|TRHDE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	541.8331909179688	2	541.837665	1081.66078	0.003053	1.6542E-06	0.0091146	4.9386E-06	0.012168	6.5928E-06	541.8374150925847	36.603	0.64279	36.627	36.228	36.87	0.023624					27	18	2	0	0	0	0.78983	1	2009	2009		27.882	3.3631	1	81181	+		32898	16652	21710	21720	37514	37514					0.12321400013956918
LNLPPLLVL	9	Unmodified	_LNLPPLLVL_					0	0	0		ENSG00000185669|ENST00000332281|SNAI3	ENSG00000185669|ENST00000332281|SNAI3	ENSG00000185669|ENST00000332281|SNAI3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.3332824707031	2	496.331153	990.647754	0.23777	0.00011801	2.2378	0.0011107	2.4756	0.0012287	496.3320397309647	60.467	0.82834	60.435	59.982	60.81	-0.032051					35	22	2	0	0	0	0.7932	1	5749	5749		19.36	6.4008	1	53179			32899	7733	21711	21721	37515	37515					0.15205568901853894
LNLPPLLVL	9	Unmodified	_LNLPPLLVL_					0	0	0		ENSG00000185669|ENST00000332281|SNAI3	ENSG00000185669|ENST00000332281|SNAI3	ENSG00000185669|ENST00000332281|SNAI3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	496.331153	990.647754	-0.074437	-3.6946E-05	2.2135	0.0010986	2.139	0.0010617	496.3320593081617	60.728	0.9236	60.715	60.113	61.037	-0.012199	0.12339	-0.0013327	NaN	19.36	35	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59205			32900	7733	21711	21721							0.15205568901853894
LNLPPLLVL	9	Unmodified	_LNLPPLLVL_					0	0	0		ENSG00000185669|ENST00000332281|SNAI3	ENSG00000185669|ENST00000332281|SNAI3	ENSG00000185669|ENST00000332281|SNAI3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	496.331153	990.647754	-2.3608	-0.0011717	4.7783	0.0023716	2.4175	0.0011999	496.3333808594101	60.295	0.8334	60.328	60.029	60.862	0.032825	-0.26453	0.0012133	NaN	19.36	31	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71739			32901	7733	21711	21721							0.15205568901853894
LNLPPLLVL	9	Unmodified	_LNLPPLLVL_					0	0	0		ENSG00000185669|ENST00000332281|SNAI3	ENSG00000185669|ENST00000332281|SNAI3	ENSG00000185669|ENST00000332281|SNAI3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	496.331153	990.647754	0.43539	0.0002161	2.4351	0.0012086	2.8705	0.0014247	496.3320230264464	60.422	0.80899	60.538	60.055	60.864	0.11676	-0.053628	-0.0011128	NaN	19.36	38	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113700			32902	7733	21711	21721							0.15205568901853894
LNLPPLLVL	9	Unmodified	_LNLPPLLVL_					0	0	0		ENSG00000185669|ENST00000332281|SNAI3	ENSG00000185669|ENST00000332281|SNAI3	ENSG00000185669|ENST00000332281|SNAI3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	496.331153	990.647754	-0.65158	-0.0003234	3.2168	0.0015966	2.5652	0.0012732	496.3325837522565	60.679	0.84482	60.687	60.155	61	0.0081177	0.094774	-0.00033678	NaN	19.36	43	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104720			32903	7733	21711	21721							0.15205568901853894
LNLPQSNLSR	10	Unmodified	_LNLPQSNLSR_					0	0	0			REV__ENSG00000226887|ENST00000443173|ERVMER34-1	REV__ENSG00000226887|ENST00000443173|ERVMER34-1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.3218383789062	2	571.319837	1140.62512	0.53952	0.00030824	2.6964	0.0015405	3.2359	0.0018487	571.3212757910784	64.451	0.72825	65.004	64.641	65.37	0.55386					52	17	4	0	0	0	0.63899	1	6975	6975		47.96	2.0076	1	859150	+		32904	15832	21712	21722	37516	37516					0.06043317766284417
LNLRNNKFM	9	Unmodified	_LNLRNNKFM_					0	0	0		ENSG00000179542|ENST00000356928|SLITRK4	ENSG00000179542|ENST00000356928|SLITRK4	ENSG00000179542|ENST00000356928|SLITRK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.3139038085938	2	575.3135	1148.61245	0.091115	5.242E-05	1.6622	0.00095627	1.7533	0.0010087	575.3143020395933	16.361	0.32188	15.763	15.648	15.97	-0.59873					11	6	2	0	0	0	0.77546	1	131	131		31.955	6.3808	1	160080			32905	7277	21713	21723	37517	37517					0.04408583102372177
LNLRSPNN	8	Unmodified	_LNLRSPNN_					0	0	0		ENSG00000110092|ENST00000227507|CCND1	ENSG00000110092|ENST00000227507|CCND1	ENSG00000110092|ENST00000227507|CCND1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2540283203125	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.87422	1	8586	8586		30.318	2.0634	1	1449300			32906	2511	21714	21724	37518	37518					0.027191324691784757
LNLTKLKV	8	Unmodified	_LNLTKLKV_					0	0	0		ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.8099365234375	2	464.813128	927.611703	-0.0085672	-3.9822E-06	0.0038038	1.768E-06	-0.0047635	-2.2141E-06	464.812967373292	36.951	1.2338	36.927	36.503	37.737	-0.023979					51	27	3	0	0	0	0.36517	1	2386	2386		82.241	2.5279	1	390210			32907	8090	21715	21725	37519	37519					0.1450011172498762
LNLVVLPT	8	Unmodified	_LNLVVLPT_					0	0	0			REV__nc|ENSG00000154822|Q9UPR0-2|PLCL2	REV__nc|ENSG00000154822|Q9UPR0-2|PLCL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7803649902344	2	434.778754	867.542954	0.12026	5.2288E-05	3.2796	0.0014259	3.3998	0.0014782	434.78004408406343	33.259	0.88562	33.227	32.891	33.776	-0.032677					85	40	3	0	0	0	0.86288	1	1618	1618		26.796	2.5934	1	316820	+		32908	20404	21716	21726	37520	37520					0.10388447425270897
LNMPLSEV	8	Unmodified	_LNMPLSEV_					0	0	0		ENSG00000219435|ENST00000328404|CATSPERZ	ENSG00000219435|ENST00000328404|CATSPERZ	ENSG00000219435|ENST00000328404|CATSPERZ	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.6337890625	2	451.736228	901.457904	-0.28758	-0.00012991	3.4636	0.0015646	3.176	0.0014347	451.73821356948815	32.296	0.66975	32.242	31.869	32.539	-0.05434					18	14	2	0	0	0	0.4196	1	1878	1878		30.504	5.0535	1	28563			32909	8664	21717	21727	37521	37521					0.0032333389716541205
LNNDTIHLLKL	11	Unmodified	_LNNDTIHLLKL_					0	0	0			REV__ENST00000533134.1_1_11:120924418-120928239:+|nuORF	REV__ENST00000533134.1_1_11:120924418-120928239:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	431.30523681640625	3	431.922355	1292.74524	0.51168	0.00022101	3.6969	0.0015968	4.2086	0.0018178	431.92387254723843	76.078	1.3365	76.211	75.398	76.735	0.13325					76	39	3	0	0	0	0.17396	1	7175	7175		32.034	0	1	154700	+		32910	20367	21718	21728	37522	37522					0.11057306040061121
LNPCERTK	8	Unmodified	_LNPCERTK_					0	0	0			REV__ENST00000537473.2_1_12:57057668-57057737:-|nuORF	REV__ENST00000537473.2_1_12:57057668-57057737:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.7903137207031	2	480.750201	959.48585	0.20619	9.9126E-05	-0.20072	-9.6497E-05	0.0054683	2.6289E-06	480.75005915130055	23.287	0.45267	22.713	22.467	22.92	-0.57415					18	10	2	0	0	0	0.4196	1	1038	1038		32.812	0	1	80247	+		32911	28420	21719	21729	37523	37523					0.00448656877256326
LNPDSRYRTQ	10	Unmodified	_LNPDSRYRTQ_					0	0	0			REV__ENSG00000079841|ENST00000521978|RIMS1	REV__ENSG00000079841|ENST00000521978|RIMS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.320556640625	2	625.317825	1248.6211	-0.61694	-0.00038578	4.2489	0.0026569	3.632	0.0022711	625.3204345211741	64.692	1.0387	64.692	64.408	65.447	0					102	48	3	0	0	0	0.34329	2	5707	5682;5707		68.846	15.909	1	308710	+		32912	16792	21720	21730	37524;37525	37525					0.006732282725806726
LNPDSRYRTQ	10	Unmodified	_LNPDSRYRTQ_					0	0	0			REV__ENSG00000079841|ENST00000521978|RIMS1	REV__ENSG00000079841|ENST00000521978|RIMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	625.3204345703125	2	625.317825	1248.6211	-0.24573	-0.00015366	3.6128	0.0022592	3.3671	0.0021055	625.3199751264785	64.714	1.3394	64.719	64.245	65.584	0.0046997					92	46	4	0	0	0	0.40664	1	6070	6070		63.534	6.8128	1	486230	+		32913	16792	21720	21730	37526	37526					0.006732282725806726
LNPDSRYRTQ	10	Unmodified	_LNPDSRYRTQ_					0	0	0			REV__ENSG00000079841|ENST00000521978|RIMS1	REV__ENSG00000079841|ENST00000521978|RIMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.320556640625	2	625.317825	1248.6211	-0.11129	-6.9589E-05	3.4786	0.0021752	3.3673	0.0021056	625.3198556455025	64.556	1.0904	64.521	64.106	65.197	-0.034256					72	32	3	0	0	0	0.49268	1	6139	6139		56.434	10.462	1	434670	+		32914	16792	21720	21730	37527	37527					0.006732282725806726
LNPDSRYRTQ	10	Unmodified	_LNPDSRYRTQ_					0	0	0			REV__ENSG00000079841|ENST00000521978|RIMS1	REV__ENSG00000079841|ENST00000521978|RIMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.3201904296875	2	625.317825	1248.6211	-0.68478	-0.00042821	4.0057	0.0025048	3.3209	0.0020766	625.3201576946594	64.459	1.2974	64.486	64.064	65.361	0.027138					89	41	4	0	0	0	0.51401	2	6061	6061;6126		54.722	5.1863	1	457250	+		32915	16792	21720	21730	37528;37529	37528					0.006732282725806726
LNPFADLWKP	10	Unmodified	_LNPFADLWKP_					0	0	0			REV__ENST00000405166.1_1_6:111368073-111368568:-|nuORF	REV__ENST00000405166.1_1_6:111368073-111368568:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8242797851562	2	600.824224	1199.63389	-0.59314	-0.00035637	1.073	0.00064466	0.47982	0.00028829	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.69342	1	6842	6842		45.022	6.2686	1	825510	+		32916	26286	21721	21731	37530	37530					0.04206291402738316
LNPGKGLI	8	Unmodified	_LNPGKGLI_					0	0	0			REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.257080078125	2	406.255446	810.496338	0.24451	9.9332E-05	3.6464	0.0014814	3.8909	0.0015807	406.2568400859257	46.431	2.1301	46.469	45.48	47.61	0.038185					131	59	3	0	0	0	0.85277	1	3408	3408		25.45	1.2474	1	637870	+		32917	24003	21722	21732	37531	37531					0.08351007594001203
LNPGKGLI	8	Unmodified	_LNPGKGLI_					0	0	0			REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.255446	810.496338	-1.7867	-0.00072586	5.6755	0.0023057	3.8888	0.0015799	406.257656492997	46.508	1.6835	46.508	45.699	47.383	0	0.021007	0.0011395	NaN	25.45	104	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	643000	+		32918	24003	21722	21732							0.08351007594001203
LNPGKGLI	8	Unmodified	_LNPGKGLI_					0	0	0			REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	406.255446	810.496338	0.065502	2.6611E-05	4.0755	0.0016557	4.141	0.0016823	406.2570247857342	46.642	2.1765	46.628	45.582	47.758	-0.013821	0.14137	-0.00016046	NaN	25.45	120	59	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	473090	+		32919	24003	21722	21732							0.08351007594001203
LNPGKGLI	8	Unmodified	_LNPGKGLI_					0	0	0			REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.255446	810.496338	-0.89666	-0.00036427	4.9541	0.0020126	4.0575	0.0016484	406.25734436945913	46.634	2.0236	46.605	45.583	47.607	-0.028782	0.11795	0.00055341	NaN	25.45	108	52	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	481230	+		32920	24003	21722	21732							0.08351007594001203
LNPGKGLI	8	Unmodified	_LNPGKGLI_					0	0	0			REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.255446	810.496338	2.2637	0.00091964	1.7998	0.0007312	4.0635	0.0016508	406.25609578109476	46.596	2.1587	46.592	45.49	47.649	-0.0041618	0.10533	-0.0020095	NaN	25.45	114	55	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	485650	+		32921	24003	21722	21732							0.08351007594001203
LNPGKGLI	8	Unmodified	_LNPGKGLI_					0	0	0			REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.8911	-0.00076826	5.7462	0.0023344	3.8551	0.0015662	406.257671211554	46.421	2.4398	46.436	45.161	47.601	0.015514	-0.05037	0.001197	NaN	25.45	125	67	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	631900	+		32922	24003	21722	21732							0.08351007594001203
LNPGKGLI	8	Unmodified	_LNPGKGLI_					0	0	0			REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	406.255446	810.496338	0.24451	9.9332E-05	3.6464	0.0014814	3.8909	0.0015807	406.2568400859257	46.431	2.1301	46.469	45.48	47.61	0.038185	-0.017555	-0.00050914	NaN	25.45	131	59	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	637870	+		32923	24003	21722	21732							0.08351007594001203
LNPGKGLI	8	Unmodified	_LNPGKGLI_					0	0	0			REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	REV__ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	406.255446	810.496338	0.3363	0.00013662	3.721	0.0015117	4.0573	0.0016483	406.25680988141846	45.777	1.2541	46.249	45.767	47.021	0.4714	-0.23792	-0.00044849	NaN	25.45	53	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	454880	+		32924	24003	21722	21732							0.08351007594001203
LNQALMPR	8	Unmodified	_LNQALMPR_					0	0	0			REV__ENST00000515631.1_1_4:39230179-39233922:+|nuORF	REV__ENST00000515631.1_1_4:39230179-39233922:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76873779296875	2	471.763112	941.511671	-0.56378	-0.00026597	1.7567	0.00082876	1.1929	0.00056279	471.7630723601613	48.927	0.76153	49.387	48.862	49.623	0.45983					30	18	2	0	0	0	0.4196	1	4739	4739		33.516	0	1	469400	+		32925	20565	21723	21733	37532	37532					0.038575511195290346
LNQAVRLTEP	10	Unmodified	_LNQAVRLTEP_					0	0	0			REV__nc|ENSG00000136824|O95347-2|SMC2	REV__nc|ENSG00000136824|O95347-2|SMC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.8241577148438	2	570.822212	1139.62987	0.47648	0.00027199	3.3136	0.0018915	3.7901	0.0021635	570.824103297056	61.379	0.88304	61.486	61.341	62.225	0.10743					65	40	2	0	0	0	0.8545	1	5331	5331		36.447	8.5645	1	1285800	+		32926	19337	21724	21734	37533	37533					0.06564201909031908
LNQKHILLKK	10	Unmodified	_LNQKHILLKK_					0	0	0		ENST00000400075.3_1_21:27124380-27124422:+|nuORF	ENST00000400075.3_1_21:27124380-27124422:+|nuORF	ENST00000400075.3_1_21:27124380-27124422:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7667541503906	3	412.271319	1233.79213	0.28412	0.00011713	4.3715	0.0018022	4.6556	0.0019194	412.2730374869331	50.772	0.65092	50.822	50.674	51.324	0.049896					34	19	3	0	0	0	0.37624	1	4067	4067		7.0187	3.8074	1	80189			32927	11218	21725	21735	37534	37534					0.18458210381822937
LNQLWSLLS	9	Unmodified	_LNQLWSLLS_					0	0	0			REV__nc|ENSG00000085433|O94967-2|WDR47	REV__nc|ENSG00000085433|O94967-2|WDR47	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	537.3001708984375	2	537.303124	1072.5917	0.0029858	1.6043E-06	-3.8158	-0.0020502	-3.8128	-0.0020486	537.3009451453933	50.198	0.77192	50.195	49.838	50.609	-0.0030365					47	18	3	0	0	0	0.049188	1	4258	4258		108.09	6.4868	1	962930	+		32928	16889	21726	21736	37535	37535					0.05830315994398916
LNQLWSLLS	9	Unmodified	_LNQLWSLLS_					0	0	0			REV__nc|ENSG00000085433|O94967-2|WDR47	REV__nc|ENSG00000085433|O94967-2|WDR47	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.3009033203125	2	537.303124	1072.5917	0.35186	0.00018905	-4.1531	-0.0022314	-3.8012	-0.0020424	537.3007589479149	50.199	0.83301	50.202	49.855	50.688	0.0035973					51	18	4	0	0	0	0.01944	1	4270	4270		125.81	13.403	1	980940	+		32929	16889	21726	21736	37536	37536					0.05830315994398916
LNQTRITSI	9	Unmodified	_LNQTRITSI_					0	0	0			REV__ENST00000446331.6_1_8:11660331-11696115:+|nuORF	REV__ENST00000446331.6_1_8:11660331-11696115:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3036499023438	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.77696	1	10844	10844		31.53	0	1	11944000	+		32930	16785	21727	21737	37537	37537					0.07224530363282611
LNQVPPNK	8	Unmodified	_LNQVPPNK_					0	0	0		ENSG00000155111|ENST00000368911|CDK19;nc|ENSG00000155111|Q9BWU1-2|CDK19	ENSG00000155111|ENST00000368911|CDK19	ENSG00000155111|ENST00000368911|CDK19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.2576599121094	2	455.261259	908.507966	0.3657	0.00016649	-0.6041	-0.00027502	-0.2384	-0.00010854	455.2608084433634	28.149	0.69855	28.185	27.846	28.544	0.03607					29	24	2	0	0	0	0.92457	1	1320	1320		47.916	5.5195	1	35164			32931	5313	21728	21738	37538	37538					0.05005204617327763
LNRAGNSH	8	Unmodified	_LNRAGNSH_					0	0	0			REV__nc|ENSG00000110076|Q9P2S2-2|NRXN2	REV__nc|ENSG00000110076|Q9P2S2-2|NRXN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77880859375	2	434.722833	867.431112	1.5805	0.00068706	3.8991	0.001695	5.4795	0.0023821	434.72455024306834	34.955	0.57465	35.336	35.06	35.635	0.3812					22	14	2	0	0	0	0.4196	1	2608	2608		25.45	0	1	390360	+		32932	17793	21729	21739	37539	37539					-0.007905938791395783
LNREKSSL	8	Unmodified	_LNREKSSL_					0	0	0		ENST00000416283.6_1_7:77522925-77530034:+|nuORF	ENST00000416283.6_1_7:77522925-77530034:+|nuORF	ENST00000416283.6_1_7:77522925-77530034:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.769775390625	2	473.769448	945.524344	-0.26148	-0.00012388	-0.32406	-0.00015353	-0.58554	-0.00027741	473.76948167571226	28.498	0.63564	28.458	28.116	28.752	-0.039906					26	15	2	0	0	0	0.87792	2	1433	1433;1444		37.159	4.8369	1	72176			32933	11393	21730	21740	37540;37541	37540					0.049402857834252245
LNRGKGILLHS	11	Unmodified	_LNRGKGILLHS_					0	0	0		ENST00000478291.1_1_3:184049262-184049734:+|nuORF	ENST00000478291.1_1_3:184049262-184049734:+|nuORF	ENST00000478291.1_1_3:184049262-184049734:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3665771484375	2	604.367121	1206.71969	-0.16845	-0.00010181	-0.046458	-2.8078E-05	-0.21491	-0.00012989	604.3669303033663	107.81	0.85171	107.81	107.02	107.87	0					52	20	4	0	0	0	0.73893	1	11134	11134		24.519	0.99649	1	11686000			32934	12384	21731	21741	37542	37542					0.12459876308275852
LNRHCEKIY	9	Unmodified	_LNRHCEKIY_					0	0	0		ENSG00000105556|ENST00000264819|MIER2	ENSG00000105556|ENST00000264819|MIER2	ENSG00000105556|ENST00000264819|MIER2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	588.3033447265625	2	588.303133	1174.59171	-1.1324	-0.00066617	1.0909	0.00064176	-0.041483	-2.4404E-05	588.3032627670148	80.332	1.0104	80.388	80.072	81.082	0.055916					64	27	4	0	0	0	0.17307	1	7957	7957		79.451	2.6044	1	454470			32935	2226	21732	21742	37543	37543					0.011399927227330409
LNRHRRRRERE	11	Unmodified	_LNRHRRRRERE_					0	0	0			REV__ENSG00000159166|ENST00000391967|LAD1	REV__ENSG00000159166|ENST00000391967|LAD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.8267822265625	3	526.636717	1576.88832	0.60208	0.00031708	0.12037	6.3393E-05	0.72246	0.00038047	526.636689153105	75.662	0.11469	75.795	75.72	75.835	0.13325					4	2	2	0	0	0	0.18331	1	7051	7051		9.2118	1.8121	1	16493	+		32936	20642	21733	21743	37544	37544					0.12295170994457294
LNRHYYSITIN	11	Unmodified	_LNRHYYSITIN_					0	0	0		ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENSG00000115233|ENST00000409682|PSMD14	ENST00000477232.5_1_2:162241962-162267908:+|nuORF	ENST00000477232.5_1_2:162241962-162267908:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2992248535156	3	465.245609	1392.715	0.76853	0.00035755	0.51824	0.00024111	1.2868	0.00059866	465.24606349156437	107.07	0.44801	107.16	106.78	107.23	0.091255					13	10	2	0	0	0	0.17925	1	11462	11462		15.337	0	1	112200			32937	2822	21734	21744	37545	37545					0.034349473748534365
LNRHYYSITIN	11	Unmodified	_LNRHYYSITIN_					0	0	0		ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENSG00000115233|ENST00000409682|PSMD14	ENST00000477232.5_1_2:162241962-162267908:+|nuORF	ENST00000477232.5_1_2:162241962-162267908:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	465.245609	1392.715	-1.7281	-0.00080399	2.8258	0.0013147	1.0977	0.0005107	465.2469289034147	106.91	0.37895	106.96	106.74	107.12	0.053757	-0.099851	0.0011491	NaN	15.337	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85795			32938	2822	21734	21744							0.034349473748534365
LNRKLAVGSH	10	Unmodified	_LNRKLAVGSH_					0	0	0		ENSG00000165650|ENST00000334464|PDZD8	ENSG00000165650|ENST00000334464|PDZD8	ENSG00000165650|ENST00000334464|PDZD8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.3204956054688	2	547.825089	1093.63563	-0.002488	-1.363E-06	-3.3461	-0.0018331	-3.3486	-0.0018344	547.8232937034472	22.73	0.60503	22.311	21.97	22.575	-0.41879					17	13	2	0	0	0	0.37624	1	959	959		19.104	0	1	77733			32939	6105	21735	21745	37546	37546					0.0925534521136342
LNRKPQGG	8	Unmodified	_LNRKPQGG_					0	0	0		nc|ENSG00000152782|Q8TE04|PANK1	nc|ENSG00000152782|Q8TE04|PANK1	nc|ENSG00000152782|Q8TE04|PANK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2522277832031	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.86791	1	7902	7902		28.254	1.4582	1	2743300			32940	14997	21736	21746	37547	37547					0.04839453677391248
LNRLREPLLR	10	Unmodified	_LNRLREPLLR_					0	0	0		nc|ENSG00000172175|Q9UDY8-2|MALT1;ENSG00000172175|ENST00000649217|MALT1	nc|ENSG00000172175|Q9UDY8-2|MALT1	nc|ENSG00000172175|Q9UDY8-2|MALT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.2709655761719	3	427.270089	1278.78844	0.59953	0.00025616	2.7188	0.0011617	3.3184	0.0014178	427.2712325235539	37.091	1.1654	37.404	36.962	38.127	0.31312					94	28	5	0	0	0	0.86207	1	2932	2932		24.232	2.5461	1	3902400			32941	6749	21737	21747	37548	37548					0.16019540607976523
LNRLRPQRGR	10	Unmodified	_LNRLRPQRGR_					0	0	0		ENST00000553142.5_1_12:58021477-58021885:-|nuORF	ENST00000553142.5_1_12:58021477-58021885:-|nuORF	ENST00000553142.5_1_12:58021477-58021885:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5923156738281	3	422.593566	1264.75887	1.3012	0.00054986	-3.4744	-0.0014683	-2.1732	-0.00091839	422.59197853531197	58.619	1.7414	58.653	57.951	59.692	0.033905					114	50	3	0	0	0	0.85441	1	5372	5372		20.837	3.6704	1	112420			32942	13694	21738	21748	37549	37549					0.13708021382490188
LNRQRRKTAR	10	Unmodified	_LNRQRRKTAR_					0	0	0			REV__ENSG00000134780|ENST00000257215|DAGLA	REV__ENSG00000134780|ENST00000257215|DAGLA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.2555847167969	3	433.600721	1297.78033	2.3541	0.0010207	-3.2677	-0.0014169	-0.91363	-0.00039615	433.5994400759489	107.04	1.2342	107.07	106.63	107.86	0.036087					66	28	3	0	0	0	0.37624	1	11747	11747		7.0187	0	1	1020600	+		32943	19167	21739	21749	37550	37550					0.14335406411214535
LNRRRELAAL	10	Unmodified	_LNRRRELAAL_					0	0	0		ENST00000371088.4_1_1:63989240-63989291:+|nuORF	ENST00000371088.4_1_1:63989240-63989291:+|nuORF	ENST00000371088.4_1_1:63989240-63989291:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3693237304688	2	606.370195	1210.72584	2.2948	0.0013915	-3.4602	-0.0020982	-1.1655	-0.00070671	606.3679986963975	94.415	3.2479	94.356	93.249	96.497	-0.059212					198	76	3	0	0	0	0.86348	1	10015	10015		31.53	3.6476	1	800340			32944	10658	21740	21750	37551	37551					0.12890394539817862
LNRSPLQY	8	Unmodified	_LNRSPLQY_					0	0	0			REV__ENSG00000132326|ENST00000254657|PER2	REV__ENSG00000132326|ENST00000254657|PER2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.23541259765625	2	495.771991	989.529429	-1.3133	-0.00065109	0.94356	0.00046779	-0.36971	-0.00018329	495.77252851804576	46.912	0.43582	47.384	47.214	47.65	0.47139					15	9	3	0	0	0	0.4196	1	4451	4451		53.351	14.545	1	514710	+		32945	18993	21741	21751	37552	37552					0.034245896460333825
LNRTLKKMG	9	Unmodified	_LNRTLKKMG_					0	0	0		ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L;ENSG00000100129|ENST00000652021|EIF3L;ENST00000460638.1_1_22:38282753-38284468:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.8207397460938	2	530.818418	1059.62228	0.86442	0.00045885	3.8122	0.0020236	4.6766	0.0024824	530.8204450676391	80.434	1.3535	80.374	79.998	81.352	-0.059692					100	39	4	0	0	0	0.67345	1	8122	8122		42.396	6.7778	1	626610			32946	11976;12763	21742	21752	37553	37553					0.09485771107779328
LNRTLKKMG	9	Unmodified	_LNRTLKKMG_					0	0	0		ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L;ENSG00000100129|ENST00000652021|EIF3L;ENST00000460638.1_1_22:38282753-38284468:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.8206787109375	2	530.818418	1059.62228	0.78062	0.00041437	3.9877	0.0021167	4.7683	0.0025311	530.820404965767	82.475	1.248	82.534	82.031	83.279	0.059166					76	28	4	0	0	0	0.77244	1	8228	8228		32.812	0.85756	1	1356800			32947	11976;12763	21742	21752	37554	37554					0.09485771107779328
LNRTLKKMG	9	Unmodified	_LNRTLKKMG_					0	0	0		ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L;ENSG00000100129|ENST00000652021|EIF3L;ENST00000460638.1_1_22:38282753-38284468:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8206787109375	2	530.818418	1059.62228	0.66638	0.00035373	4.1765	0.002217	4.8429	0.0025707	530.8204640085535	82.305	1.3281	82.45	81.982	83.31	0.14551					83	30	4	0	0	0	0.77244	1	7919	7919		32.812	1.2826	1	1921600			32948	11976;12763	21742	21752	37555	37555					0.09485771107779328
LNRYLCLAVL	10	Unmodified	_LNRYLCLAVL_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3429565429688	2	589.341726	1176.6689	-0.3676	-0.00021664	2.4536	0.001446	2.086	0.0012294	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.86589	1	9254	9254		29.15	2.4566	1	11103000			32949	8027	21743	21753	37556	37556					0.08763210939059718
LNRYLCLAVL	10	Unmodified	_LNRYLCLAVL_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3432006835938	2	589.341726	1176.6689	0.83312	0.00049099	1.1429	0.00067355	1.976	0.0011645	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.86589	1	9801	9801		29.15	2.4566	1	20363000			32950	8027	21743	21753	37557	37557					0.08763210939059718
LNSAKTPPT	9	Unmodified	_LNSAKTPPT_					0	0	0			REV__ENSG00000198087|ENST00000359314|CD2AP	REV__ENSG00000198087|ENST00000359314|CD2AP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.75836181640625	2	464.758549	927.502546	0.82813	0.00038488	-0.78159	-0.00036325	0.046535	2.1627E-05	464.75800958652354	33.711	0.74689	34.016	33.66	34.406	0.30495					53	17	4	0	0	0	0.19818	1	2447	2447		74.255	1.3758	1	1292900	+		32951	23297	21744	21754	37558	37558					0.03589481034839537
LNSGVILSIH	10	Unmodified	_LNSGVILSIH_					0	0	0		ENST00000547751.5_1_12:45059243-45269664:-|nuORF;chr12:44875353-44875507|39|14.69|0.69|4.4|-|ENST00000551601|NELL2,NELL2;nc|ENSG00000184613|Q99435-4|NELL2;ENSG00000184613|ENST00000429094|NELL2;nc|ENSG00000184613|Q99435-2|NELL2;nc|ENSG00000184613|Q99435-3|NELL2	ENST00000547751.5_1_12:45059243-45269664:-|nuORF	ENST00000547751.5_1_12:45059243-45269664:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8081665039062	2	526.808574	1051.60259	2.0771	0.0010942	-3.8443	-0.0020252	-1.7672	-0.00093099	526.8065947880607	99.033	1.2732	99.395	98.525	99.798	0.36137					108	31	5	0	0	0	0.30722	1	11885	11885		71.877	0.58177	1	32054000			32952	129	21745	21755	37559	37559					0.07885718368675043
LNSILPLL	8	Unmodified	_LNSILPLL_					0	0	0			REV__ENST00000467985.1_1_3:48607641-48608140:-|nuORF	REV__ENST00000467985.1_1_3:48607641-48608140:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7870788574219	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.82419	1	3427	3427		13.775	0	1	325400	+		32953	27171	21746	21756	37560	37560					0.11308733942325944
LNSKRLISD	9	Unmodified	_LNSKRLISD_					0	0	0		chr15:75605227-75609558|21|29.29|0.41|6.16|-|1|SNUPN,SNUPN|1	chr15:75605227-75609558|21|29.29|0.41|6.16|-|1|SNUPN,SNUPN|1	chr15:75605227-75609558|21|29.29|0.41|6.16|-|1|SNUPN,SNUPN|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3040161132812	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.48102	1	10873	10873		52.937	3.4952	1	13160000			32954	194	21747	21757	37561	37561					0.07224530363305348
LNSLLSMSCHL	11	Unmodified	_LNSLLSMSCHL_					0	0	0			REV__ENST00000449111.5_1_X:149108908-149110531:+|nuORF	REV__ENST00000449111.5_1_X:149108908-149110531:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.5390930175781	3	406.538748	1216.59441	-1.9198	-0.00078047	2.6465	0.0010759	0.72671	0.00029544	406.539735348608	30.736	0.46292	30.799	30.591	31.054	0.063124					55	22	3	0	0	0	0.62914	1	1371	1371		41.08	1.8272	1	256910	+		32955	26849	21748	21758	37562	37562					-0.005219199346356618
LNSLSVPVLHS	11	Unmodified	_LNSLSVPVLHS_					0	0	0			REV__nc|ENSG00000116604|Q14814-5|MEF2D	REV__nc|ENSG00000116604|Q14814-5|MEF2D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.8318481445312	2	583.332413	1164.65027	-0.28765	-0.00016779	2.9602	0.0017268	2.6726	0.001559	583.3339991579545	94.375	0.77206	94.811	94.676	95.448	0.43539					32	18	2	0	0	0	0.17245	1	11308	11308		23.523	0	1	343910	+		32956	29795	21749	21759	37563	37563					0.07453372568852501
LNSNLHLRLL	10	Unmodified	_LNSNLHLRLL_					0	0	0			REV__ENSG00000170382|ENST00000367177|LRRN2	REV__ENSG00000170382|ENST00000367177|LRRN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.8612060546875	2	596.861672	1191.70879	-0.19593	-0.00011694	-0.20147	-0.00012025	-0.3974	-0.00023719	596.8611023138994	75.118	0.8503	75.683	75.456	76.306	0.56458					34	20	2	0	0	0	0.82886	1	8540	8540		37.812	11.015	1	339440	+		32957	21654	21750	21760	37564	37564					0.12060473933979665
LNSNLHLRLL	10	Unmodified	_LNSNLHLRLL_					0	0	0			REV__ENSG00000170382|ENST00000367177|LRRN2	REV__ENSG00000170382|ENST00000367177|LRRN2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	596.861672	1191.70879	-0.19593	-0.00011694	-0.20147	-0.00012025	-0.3974	-0.00023719	596.8611023138994	75.118	0.8503	75.683	75.456	76.306	0.56458	-0.074018	0.0001689	NaN	37.812	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	339440	+		32958	21654	21750	21760							0.12060473933979665
LNSVSPSPL	9	Unmodified	_LNSVSPSPL_					0	0	0		ENST00000488573.1_1_6:152129326-152132204:+|nuORF;nc|ENSG00000091831|P03372-2|ESR1;ENSG00000091831|ENST00000206249|ESR1	ENST00000488573.1_1_6:152129326-152132204:+|nuORF	ENST00000488573.1_1_6:152129326-152132204:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.25341796875	2	457.2531	912.491647	-1.0616	-0.00048543	1.5052	0.00068825	0.44356	0.00020282	457.25362094838925	31.811	1.3336	31.937	31.344	32.677	0.12643					58	30	4	0	0	0	0.51592	1	2179	2179		51.193	1.7511	1	534050			32959	1683	21751	21761	37565	37565					0.031900786605774556
LNTDLELF	8	Unmodified	_LNTDLELF_					0	0	0			REV__nc|ENSG00000099977|P30046-2|DDT	REV__nc|ENSG00000099977|P30046-2|DDT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.7524108886719	2	482.752933	963.491313	0.5946	0.00028705	-0.30748	-0.00014844	0.28712	0.00013861	482.7527032442209	76.482	0.66589	76.881	76.491	77.157	0.39969					42	18	3	0	0	0	0.47906	1	8685	8685		76.847	0	1	681060	+		32960	17120	21752	21762	37566	37566					0.00810658940713438
LNTGGSPGP	9	Unmodified	_LNTGGSPGP_					0	0	0		ENST00000303127.11_1_5:176758695-176758839:-|nuORF	ENST00000303127.11_1_5:176758695-176758839:-|nuORF	ENST00000303127.11_1_5:176758695-176758839:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2008056640625	2	400.200867	798.387182	-1.8507	-0.00074064	-0.79596	-0.00031855	-2.6466	-0.0010592	400.2020327655788	68.039	1.0961	68.174	67.814	68.91	0.13522					55	41	2	0	0	0	0.19953	2	6097	6097;6147		73.975	8.1716	1	183560			32961	9826	21753	21763	37567;37568	37567					-0.02007623096142197
LNTGGSPGP	9	Unmodified	_LNTGGSPGP_					0	0	0		ENST00000303127.11_1_5:176758695-176758839:-|nuORF	ENST00000303127.11_1_5:176758695-176758839:-|nuORF	ENST00000303127.11_1_5:176758695-176758839:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.200927734375	2	400.200867	798.387182	-1.2405	-0.00049646	-2.0317	-0.00081307	-3.2722	-0.0013095	400.201810521261	68.411	1.2277	68.471	68.02	69.248	0.059288					82	51	3	0	0	0	0.47272	2	6158	6158;6167		53.351	10.756	1	208600			32962	9826	21753	21763	37569;37570	37569					-0.02007623096142197
LNTGGSPGP	9	Unmodified	_LNTGGSPGP_					0	0	0		ENST00000303127.11_1_5:176758695-176758839:-|nuORF	ENST00000303127.11_1_5:176758695-176758839:-|nuORF	ENST00000303127.11_1_5:176758695-176758839:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.199462890625	2	400.200867	798.387182	1.235	0.00049424	-3.6984	-0.0014801	-2.4635	-0.00098588	400.2007500976596	65.261	1.216	65.647	64.776	65.992	0.38615					58	31	3	0	0	0	0.47272	1	7027	7027		53.351	5.4358	1	302440			32963	9826	21753	21763	37571	37571					-0.02007623096142197
LNTGGSPGP	9	Unmodified	_LNTGGSPGP_					0	0	0		ENST00000303127.11_1_5:176758695-176758839:-|nuORF	ENST00000303127.11_1_5:176758695-176758839:-|nuORF	ENST00000303127.11_1_5:176758695-176758839:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2005920410156	2	400.200867	798.387182	-0.072413	-2.898E-05	-3.5103	-0.0014048	-3.5827	-0.0014338	400.2011984622312	64.759	1.0181	65.313	64.852	65.87	0.55386					57	25	3	0	0	0	0.35373	2	7051	7051;7062		60.972	13.056	1	265310			32964	9826	21753	21763	37572;37573	37572					-0.02007623096142197
LNTHLLTGLAR	11	Unmodified	_LNTHLLTGLAR_					0	0	0			REV__ENSG00000134250|ENST00000256646|NOTCH2	REV__ENSG00000134250|ENST00000256646|NOTCH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5746765136719	3	403.575178	1207.70371	0.92254	0.00037231	-2.2112	-0.0008924	-1.2887	-0.00052008	403.57437110018327	80.894	0.89915	81.316	80.891	81.79	0.4215					88	21	5	0	0	0	0.60888	1	9344	9344		43.419	3.5454	1	18400000	+		32965	19125	21754	21764	37574	37574					0.10816170071370834
LNTTKLSA	8	Unmodified	_LNTTKLSA_					0	0	0		nc|ENSG00000130558|Q99784-2|OLFM1;ENSG00000130558|ENST00000371793|OLFM1	nc|ENSG00000130558|Q99784-2|OLFM1	nc|ENSG00000130558|Q99784-2|OLFM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.2503967285156	2	424.247818	846.481082	2.718	0.0011531	2.5033	0.001062	5.2214	0.0022152	424.24890535908264	107.33	0.96184	107.3	106.88	107.84	-0.034134					71	22	4	0	0	0	0.87922	1	11894	11894		31.955	6.5047	1	4480000			32966	3655	21755	21765	37575	37575					0.05170096006145286
LNVAGKIH	8	Unmodified	_LNVAGKIH_					0	0	0			REV__nc|ENSG00000164045|P30304-2|CDC25A	REV__nc|ENSG00000164045|P30304-2|CDC25A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2575988769531	2	426.25852	850.502486	0.79529	0.000339	-3.7264	-0.0015884	-2.9311	-0.0012494	426.2569520659769	34.417	1.2137	34.627	34.107	35.321	0.21002					70	29	4	0	0	0	0.90465	1	2564	2564		40.573	3.5441	1	1482400	+		32967	21014	21756	21766	37576	37576					0.07125525825506429
LNVAITRTLHQ	11	Unmodified	_LNVAITRTLHQ_					0	0	0		ENSG00000173064|ENST00000682272|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.373291015625	2	633.369861	1264.72517	-0.11908	-7.5423E-05	-0.90029	-0.00057022	-1.0194	-0.00064564	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.66009	1	9526	9526		37.508	1.0614	1	2722900			32968	6820	21757	21767	37577	37577					0.10339555100085818
LNVAITRTLHQ	11	Unmodified	_LNVAITRTLHQ_					0	0	0		ENSG00000173064|ENST00000682272|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.368896484375	2	633.369861	1264.72517	1.5976	0.0010119	-2.7562	-0.0017457	-1.1585	-0.00073377	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.70278	1	11633	11633		35.152	21.698	1	10012000			32969	6820	21757	21767	37578	37578					0.10339555100085818
LNVANRLAS	9	Unmodified	_LNVANRLAS_					0	0	0			REV__nc|ENSG00000125675|P42263|GRIA3	REV__nc|ENSG00000125675|P42263|GRIA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2777404785156	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.64555	1	8009	8009		44.377	8.7589	1	1802300	+		32970	29824	21758	21768	37579	37579					0.060319920203255606
LNVANRLAS	9	Unmodified	_LNVANRLAS_					0	0	0			REV__nc|ENSG00000125675|P42263|GRIA3	REV__nc|ENSG00000125675|P42263|GRIA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2779846191406	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.7932	1	7942	7942		26.693	0	1	1785900	+		32971	29824	21758	21768	37580	37580					0.060319920203255606
LNVCLQLK	8	Unmodified	_LNVCLQLK_					0	0	0			REV__ENST00000540797.5_1_15:63885116-63885188:+|nuORF	REV__ENST00000540797.5_1_15:63885116-63885188:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7775573730469	2	465.775688	929.536823	-0.22002	-0.00010248	4.439	0.0020676	4.2189	0.0019651	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.92973	1	9607	9607		50.025	7.6284	1	1042300	+		32972	28471	21759	21769	37581	37581					0.06923605922122533
LNVDVTSFVHC	11	Carbamidomethyl (C)	_LNVDVTSFVHC(Carbamidomethyl (C))_	LNVDVTSFVHC(1)		LNVDVTSFVHC(48)		0	1	0			REV__ENSG00000064999|ENST00000360359|ANKS1A	REV__ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	645.8114624023438	2	645.810987	1289.60742	0.26866	0.00017351	1.764	0.0011392	2.0326	0.0013127	645.8120329082528	25.775	0.39312	25.881	25.694	26.087	0.1054					42	18	3	0	0	0	0.5603	1	960	960		47.657	6.5773	1	191640	+		32973	16488	21760	21770	37582	37582	219				-0.025797655508768003
LNVEKNYNL	9	Unmodified	_LNVEKNYNL_					0	0	0		nc|ENSG00000075702|O43379|WDR62;ENSG00000075702|ENST00000401500|WDR62;ENST00000587391.5_1_19:36573967-36592308:+|nuORF	nc|ENSG00000075702|O43379|WDR62	nc|ENSG00000075702|O43379|WDR62	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.2949829101562	2	553.795663	1105.57677	-0.14197	-7.862E-05	-1.1138	-0.00061684	-1.2558	-0.00069546	553.7956902824818	71.77	1.9369	72.32	71.66	73.597	0.55009					121	46	4	0	0	0	0.77244	1	8024	8024		32.812	2.3088	1	1387300			32974	1341	21761	21771	37583	37583					0.028208241263882883
LNVELIIL	8	Unmodified	_LNVELIIL_					0	0	0		ENST00000505289.5_1_4:134017916-134060133:-|nuORF	ENST00000505289.5_1_4:134017916-134060133:-|nuORF	ENST00000505289.5_1_4:134017916-134060133:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80059814453125	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7961	1	2822	2822		17.365	0	1	489490			32975	12922	21762	21772	37584	37584					0.11905003113827206
LNVFGLRSI	9	Unmodified	_LNVFGLRSI_					0	0	0		ENSG00000125037|ENST00000245046|EMC3;nc|ENSG00000125037|Q9P0I2-2|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF	ENSG00000125037|ENST00000245046|EMC3	ENSG00000125037|ENST00000245046|EMC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80352783203125	2	509.805834	1017.59712	-0.054339	-2.7702E-05	-4.0902	-0.0020852	-4.1445	-0.0021129	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.67345	1	8848	8848		42.396	1.618	1	2906900			32976	3372	21763	21773	37585	37585					0.08902039576844345
LNVHLLLGICL	11	Unmodified	_LNVHLLLGICL_					0	0	0			REV__ENST00000439838.5_3_22:30823383-30824714:+|nuORF	REV__ENST00000439838.5_3_22:30823383-30824714:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3661499023438	2	604.365201	1206.71585	3.6458	0.0022034	-1.2307	-0.00074379	2.4151	0.0014596	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.75921	1	12873	12873		19.997	0.89325	1	5883900	+		32977	26734	21764	21774	37586	37586					0.12076070490206803
LNVHLRTHTG	10	Unmodified	_LNVHLRTHTG_					0	0	0		nc|ENSG00000171469|Q8N587-2|ZNF561;ENSG00000171469|ENST00000302851|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3192749023438	2	574.320171	1146.62579	2.1223	0.0012189	-3.3781	-0.0019401	-1.2558	-0.00072123	574.3181422905453	94.479	4.1031	94.419	93.372	97.475	-0.059204					230	96	5	0	0	0	0.73395	1	10074	10074		42.864	11.334	1	1734300			32978	6668	21765	21775	37587	37587					0.058341572059816826
LNVHLRTHTG	10	Unmodified	_LNVHLRTHTG_					0	0	0		nc|ENSG00000171469|Q8N587-2|ZNF561;ENSG00000171469|ENST00000302851|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3192138671875	2	574.320171	1146.62579	1.0954	0.0006291	-2.2738	-0.0013059	-1.1784	-0.00067678	574.3187099892803	94.307	4.5457	94.353	93.159	97.704	0.046173					261	107	4	0	0	0	0.86587	1	9965	9965		29.17	2.374	1	1593500			32979	6668	21765	21775	37588	37588					0.058341572059816826
LNVHLRTHTG	10	Unmodified	_LNVHLRTHTG_					0	0	0		nc|ENSG00000171469|Q8N587-2|ZNF561;ENSG00000171469|ENST00000302851|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	nc|ENSG00000171469|Q8N587-2|ZNF561	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3192138671875	2	574.320171	1146.62579	0.81882	0.00047026	-1.9949	-0.0011457	-1.1761	-0.00067548	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.85981	1	9614	9614		35.152	7.0705	1	1866200			32980	6668	21765	21775	37589	37589					0.058341572059816826
LNVIKFKKIFI	11	Unmodified	_LNVIKFKKIFI_					0	0	0		ENST00000328550.6_1_19:38055330-38055624:-|nuORF	ENST00000328550.6_1_19:38055330-38055624:-|nuORF	ENST00000328550.6_1_19:38055330-38055624:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.9664611816406	3	454.967236	1361.87988	-2.4763	-0.0011267	0.29631	0.00013481	-2.18	-0.00099184	454.9672822128271	40.296	0.82854	40.688	40.337	41.165	0.39209					69	22	4	0	0	0	0.8498	1	3454	3454		6.001	1.3577	1	12658000			32981	10092	21766	21776	37590	37590					0.2134141125259248
LNVIKPLD	8	Unmodified	_LNVIKPLD_					0	0	0		ENSG00000124215|ENST00000348616|CDH26;nc|ENSG00000124215|Q8IXH8-1|CDH26	ENSG00000124215|ENST00000348616|CDH26	ENSG00000124215|ENST00000348616|CDH26	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7932434082031	2	456.28166	910.548768	1.324	0.0006041	-2.4704	-0.0011272	-1.1464	-0.0005231	456.28156951804243	35.421	0.41847	35.802	35.597	36.015	0.3812					12	10	2	0	0	0	0.4196	1	2738	2738		37.159	0	1	44044			32982	3318	21767	21777	37591	37591					0.08991545936930834
LNVITTNH	8	Unmodified	_LNVITTNH_					0	0	0		nc|ENSG00000168297|Q7Z7A4-7|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;ENSG00000168297|ENST00000356151|PXK	nc|ENSG00000168297|Q7Z7A4-7|PXK	nc|ENSG00000168297|Q7Z7A4-7|PXK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7932434082031	2	456.250892	910.48723	1.2674	0.00057824	-1.9155	-0.00087397	-0.64816	-0.00029572	456.25110067895594	34.912	1.3804	35.293	34.893	36.274	0.3812					87	35	3	0	0	0	0.4196	1	2738	2738		31.955	0	1	233660			32983	6389	21768	21778	37592	37592					0.02840614237675254
LNVLFGNLSI	10	Unmodified	_LNVLFGNLSI_					0	0	0		ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.31689453125	2	545.318774	1088.623	0.15577	8.4944E-05	-3.7365	-0.0020376	-3.5808	-0.0019527	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.57924	1	9524	9524		51.193	14.746	1	17220000			32984	9125	21769	21779	37593	37593					0.08222889028479585
LNVLFGNLSI	10	Unmodified	_LNVLFGNLSI_					0	0	0		ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.317138671875	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.54701	1	10483	10483		52.937	5.2794	1	4868200			32985	9125	21769	21779	37594	37594					0.08222889028479585
LNVLFGNLSI	10	Unmodified	_LNVLFGNLSI_					0	0	0		ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.31640625	2	545.318774	1088.623	-1.3538	-0.00073823	-2.3594	-0.0012866	-3.7132	-0.0020249	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.70553	1	10573	10573		44.377	0.26039	1	5184000			32986	9125	21769	21779	37595	37595					0.08222889028479585
LNVLFGNLSI	10	Unmodified	_LNVLFGNLSI_					0	0	0		ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3160400390625	2	545.318774	1088.623	-0.53242	-0.00029034	-3.3466	-0.0018249	-3.879	-0.0021153	545.3168302794771	93.277	0.88976	93.727	93.4	94.289	0.44988					49	20	3	0	0	0	0.47091	2	11173	11148;11173		58.23	12.258	1	539260			32987	9125	21769	21779	37596;37597	37597					0.08222889028479585
LNVLFGNLSI	10	Unmodified	_LNVLFGNLSI_					0	0	0		ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	545.318774	1088.623	-1.4674	-0.00080021	-2.5132	-0.0013705	-3.9807	-0.0021707	545.3172916402864	93.375	2.3581	93.567	93.147	95.505	0.19239	-0.0052735	0.0013858	NaN	58.23	96	56	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1075700			32988	9125	21769	21779							0.08222889028479585
LNVLIYSVEK	10	Unmodified	_LNVLIYSVEK_					0	0	0		ENST00000357992.8_1_1:205583594-205583885:-|nuORF	ENST00000357992.8_1_1:205583594-205583885:-|nuORF	ENST00000357992.8_1_1:205583594-205583885:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3427734375	2	589.344989	1176.67542	0.15553	9.1664E-05	-3.5398	-0.0020862	-3.3842	-0.0019945	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.86471	1	11301	11301		30.318	7.7381	1	10540000			32989	10399	21770	21780	37598	37598					0.09415427371436635
LNVLLHTLLMA	11	Unmodified	_LNVLLHTLLMA_					0	0	0		ENSG00000168124|ENST00000304646|OR1F1	ENSG00000168124|ENST00000304646|OR1F1	ENSG00000168124|ENST00000304646|OR1F1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8731689453125	2	619.370484	1236.72641	-1.2262	-0.00075948	3.3126	0.0020517	2.0864	0.0012922	619.3724290211392	101.55	1.3094	101.7	101.32	102.63	0.15505					84	32	4	0	0	0	0.76699	1	10557	10557		18.262	0.79408	1	1786600			32990	6373	21771	21781	37599	37599					0.1175205314464165
LNVLQRFKFL	10	Unmodified	_LNVLQRFKFL_					0	0	0		ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.5946960449219	3	426.595802	1276.76558	-0.045125	-1.925E-05	-2.8378	-0.0012106	-2.8829	-0.0012298	426.5944815383962	33.374	1.1492	33.377	32.989	34.138	0.0030785					68	26	4	0	0	0	0.49268	1	1924	1924		56.434	6.4003	1	379550			32991	2676	21772	21782	37600	37600					0.13826521490523191
LNVMKLVGT	9	Unmodified	_LNVMKLVGT_					0	0	0			REV__nc|ENSG00000145934|Q9NT68-2|TENM2	REV__nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7908020019531	2	487.788795	973.563038	-0.085708	-4.1808E-05	3.6076	0.0017597	3.5219	0.0017179	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.78536	1	8132	8132		29.15	4.9468	1	514950	+		32992	19977	21773	21783	37601	37601					0.0751987509358969
LNVMKLVGT	9	Unmodified	_LNVMKLVGT_					0	0	0			REV__nc|ENSG00000145934|Q9NT68-2|TENM2	REV__nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79083251953125	2	487.788795	973.563038	0.84663	0.00041298	2.8765	0.0014031	3.7232	0.0018161	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.78536	1	8864	8864		29.15	7.1897	1	2238600	+		32993	19977	21773	21783	37602	37602					0.0751987509358969
LNVMKLVGT	9	Unmodified	_LNVMKLVGT_					0	0	0			REV__nc|ENSG00000145934|Q9NT68-2|TENM2	REV__nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.79071044921875	2	487.788795	973.563038	0.6235	0.00030414	2.5998	0.0012681	3.2233	0.0015723	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.76255	2	7974	7901;7974		35.618	7.364	1	479320	+		32994	19977	21773	21783	37603;37604	37604					0.0751987509358969
LNVMKLVGT	9	Unmodified	_LNVMKLVGT_					0	0	0			REV__nc|ENSG00000145934|Q9NT68-2|TENM2	REV__nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7905578613281	2	487.788795	973.563038	0.64552	0.00031488	3.0925	0.0015085	3.738	0.0018234	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.78536	1	8248	8248		29.15	2.3535	1	1929300	+		32995	19977	21773	21783	37605	37605					0.0751987509358969
LNVNAKPFV	9	Unmodified	_LNVNAKPFV_					0	0	0		ENSG00000189369|ENST00000340438|GSPT2;nc|ENSG00000103342|P15170-2|GSPT1;ENSG00000103342|ENST00000434724|GSPT1	ENSG00000189369|ENST00000340438|GSPT2	ENSG00000189369|ENST00000340438|GSPT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.290283203125	2	501.292559	1000.57057	-0.97974	-0.00049113	-3.1223	-0.0015652	-4.1021	-0.0020563	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.7932	1	7997	7997		23.042	1.0826	1	2111000			32996	2076	21774	21784	37606	37606					0.07030350685522535
LNVNPNRKLI	10	Unmodified	_LNVNPNRKLI_					0	0	0			REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.866943359375	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.6116	6	11482	11312;11348;11384;11420;11482;11597		49.442	16.629	1	52150000	+		32997	19131	21775	21785	37607;37608;37609;37610;37611;37612	37611					0.12612473933995716
LNVNRDGRLLL	11	Unmodified	_LNVNRDGRLLL_					0	0	0			REV__ENSG00000056097|ENST00000265069|ZFR	REV__ENSG00000056097|ENST00000265069|ZFR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8821411132812	2	641.883136	1281.75172	2.2004	0.0014124	-3.2914	-0.0021127	-1.091	-0.0007003	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.60058	1	10537	10537		44.377	3.599	1	3624200	+		32998	16417	21776	21786	37613	37613					0.12211243991418996
LNVNRTQL	8	Unmodified	_LNVNRTQL_					0	0	0			REV__ENSG00000163811|ENST00000407426|WDR43	REV__ENSG00000163811|ENST00000407426|WDR43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2773742675781	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.89494	1	8566	8566		37.159	0	1	7289200	+		32999	20975	21777	21787	37614	37614					0.06031992020336929
LNVPDLLKSPV	11	Unmodified	_LNVPDLLKSPV_					0	0	0			REV__ENST00000555385.1_1_14:76045963-76129466:+|nuORF	REV__ENST00000555385.1_1_14:76045963-76129466:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8561401367188	2	597.858264	1193.70197	-0.43133	-0.00025788	-2.8188	-0.0016852	-3.2501	-0.0019431	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.60687	1	10069	10069		43.651	4.8972	1	6857100	+		33000	28659	21778	21788	37615	37615					0.11287116262769814
LNVQEQLEH	9	Unmodified	_LNVQEQLEH_					0	0	0		nc|ENSG00000173575|O14647-2|CHD2;ENSG00000173575|ENST00000394196|CHD2	nc|ENSG00000173575|O14647-2|CHD2	nc|ENSG00000173575|O14647-2|CHD2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.4400634765625	2	555.28292	1108.55129	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.025	1	25.088	24.588	25.588	0.063122								0	0	0	0.29475	1	897	897		32.812	4.9302	1				33001	6870	21779	21789	37616	37616					0.0013534960396555107
LNVRAINGT	9	Unmodified	_LNVRAINGT_					0	0	0			REV__ENSG00000102837|ENST00000219022|OLFM4	REV__ENSG00000102837|ENST00000219022|OLFM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2777404785156	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.7932	1	8376	8376		25.574	0.12388	1	7040000	+		33002	17361	21780	21790	37617	37617					0.06031992020314192
LNVRAINGT	9	Unmodified	_LNVRAINGT_					0	0	0			REV__ENSG00000102837|ENST00000219022|OLFM4	REV__ENSG00000102837|ENST00000219022|OLFM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774658203125	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.71772	1	8109	8109		39.253	3.6345	1	6441000	+		33003	17361	21780	21790	37618	37618					0.06031992020314192
LNVRKLSN	8	Unmodified	_LNVRKLSN_					0	0	0			REV__L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|5|1|sense	REV__L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2874755859375	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.87064	1	10066	10066		29.15	0.89528	1	48574000	+		33004	29452	21781	21791	37619	37619					0.0874858239999412
LNVRKLSN	8	Unmodified	_LNVRKLSN_					0	0	0			REV__L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|5|1|sense	REV__L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2875671386719	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.86677	1	9736	9736		27.882	1.0861	1	50946000	+		33005	29452	21781	21791	37620	37620					0.0874858239999412
LNVRKLSN	8	Unmodified	_LNVRKLSN_					0	0	0			REV__L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|5|1|sense	REV__L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28759765625	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.88601	2	9829	9829;9841		42.396	5.237	1	48696000	+		33006	29452	21781	21791	37621;37622	37621					0.0874858239999412
LNVRLEAP	8	Unmodified	_LNVRLEAP_					0	0	0		nc|ENSG00000142102|Q32M88-2|PGGHG;ENST00000474221.5_1_11:289135-291269:+|nuORF;ENSG00000142102|ENST00000409548|PGGHG;ENST00000409655.5_2_11:289177-290766:+|nuORF	nc|ENSG00000142102|Q32M88-2|PGGHG	nc|ENSG00000142102|Q32M88-2|PGGHG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7930603027344	2	456.269084	910.523616	-0.1016	-4.6357E-05	1.9627	0.00089552	1.8611	0.00084916	456.2699057740995	35.741	0.11084	35.989	35.933	36.043	0.24769					4	2	2	0	0	0	0.4196	1	2758	2758		24.203	11.996	1	48717			33007	4542	21782	21792	37623	37623					0.06477491134376123
LNVRQTLN	8	Unmodified	_LNVRQTLN_					0	0	0			REV__ENST00000484461.1_1_1:47150073-47162261:-|nuORF	REV__ENST00000484461.1_1_1:47150073-47162261:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2779541015625	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.89043	2	9872	9775;9872		37.159	0.41757	1	5642300	+		33008	20673	21783	21793	37624;37625	37625					0.060319920203255606
LNVRQTLN	8	Unmodified	_LNVRQTLN_					0	0	0			REV__ENST00000484461.1_1_1:47150073-47162261:-|nuORF	REV__ENST00000484461.1_1_1:47150073-47162261:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2784423828125	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.89494	1	9834	9834		37.159	2.9866	1	6350300	+		33009	20673	21783	21793	37626	37626					0.060319920203255606
LNVSAASILVF	11	Unmodified	_LNVSAASILVF_					0	0	0			REV__ENSG00000146409|ENST00000275227|SLC18B1	REV__ENSG00000146409|ENST00000275227|SLC18B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3296508789062	2	567.331882	1132.64921	-0.54401	-0.00030863	-2.6363	-0.0014957	-3.1803	-0.0018043	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.62614	1	8846	8846		41.427	12.277	1	4477200	+		33010	20013	21784	21794	37627	37627					0.0881915819995811
LNVSAASILVF	11	Unmodified	_LNVSAASILVF_					0	0	0			REV__ENSG00000146409|ENST00000275227|SLC18B1	REV__ENSG00000146409|ENST00000275227|SLC18B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3298950195312	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.66929	2	9765	9585;9765		36.447	3.6343	1	15673000	+		33011	20013	21784	21794	37628;37629	37629					0.0881915819995811
LNVSAASILVF	11	Unmodified	_LNVSAASILVF_					0	0	0			REV__ENSG00000146409|ENST00000275227|SLC18B1	REV__ENSG00000146409|ENST00000275227|SLC18B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.331882	1132.64921	0.48094	0.00027285	-3.8594	-0.0021896	-3.3785	-0.0019167	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.68532	2	9078	9028;9078		33.922	5.8401	1	6590100	+		33012	20013	21784	21794	37630;37631	37631					0.0881915819995811
LNVSAASILVF	11	Unmodified	_LNVSAASILVF_					0	0	0			REV__ENSG00000146409|ENST00000275227|SLC18B1	REV__ENSG00000146409|ENST00000275227|SLC18B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3297119140625	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.62614	3	9740	9352;9680;9740		41.427	6.2817	1	18558000	+		33013	20013	21784	21794	37632;37633;37634	37634					0.0881915819995811
LNVSAASILVF	11	Unmodified	_LNVSAASILVF_					0	0	0			REV__ENSG00000146409|ENST00000275227|SLC18B1	REV__ENSG00000146409|ENST00000275227|SLC18B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3296508789062	2	567.331882	1132.64921	-1.3957	-0.00079181	-1.9666	-0.0011157	-3.3623	-0.0019075	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.61369	1	9011	9011		42.864	0	1	5956400	+		33014	20013	21784	21794	37635	37635					0.0881915819995811
LNVSAASILVF	11	Unmodified	_LNVSAASILVF_					0	0	0			REV__ENSG00000146409|ENST00000275227|SLC18B1	REV__ENSG00000146409|ENST00000275227|SLC18B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.32958984375	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.69995	1	9346	9346		31.53	3.4483	1	17338000	+		33015	20013	21784	21794	37636	37636					0.0881915819995811
LNVSAASILVF	11	Unmodified	_LNVSAASILVF_					0	0	0			REV__ENSG00000146409|ENST00000275227|SLC18B1	REV__ENSG00000146409|ENST00000275227|SLC18B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3299560546875	2	567.331882	1132.64921	1.2029	0.00068247	-3.4414	-0.0019524	-2.2385	-0.00127	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.72106	1	10719	10719		28.081	2.5074	1	4990000	+		33016	20013	21784	21794	37637	37637					0.0881915819995811
LNVSAASILVF	11	Unmodified	_LNVSAASILVF_					0	0	0			REV__ENSG00000146409|ENST00000275227|SLC18B1	REV__ENSG00000146409|ENST00000275227|SLC18B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3296508789062	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.69995	1	11218	11218		31.53	3.6476	1	6007000	+		33017	20013	21784	21794	37638	37638					0.0881915819995811
LNVSAIVL	8	Unmodified	_LNVSAIVL_					0	0	0		ENSG00000197557|ENST00000355689|TTC30A;ENSG00000196659|ENST00000408939|TTC30B	ENSG00000197557|ENST00000355689|TTC30A	ENSG00000197557|ENST00000355689|TTC30A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	414.76177978515625	2	414.763104	827.511654	-1.9066	-0.00079078	-1.3201	-0.00054751	-3.2266	-0.0013383	414.7625113918511	88.263	2.5091	88.432	87.911	90.42	0.16923					168	58	4	0	0	0	0.88185	1	8764	8764		32.812	0.85756	1	7346500			33018	8088	21785	21795	37639	37639					0.09099874391188223
LNVSNYSH	8	Unmodified	_LNVSNYSH_					0	0	0		ENSG00000132164|ENST00000254488|SLC6A11;nc|ENSG00000132164|P48066-2|SLC6A11	ENSG00000132164|ENST00000254488|SLC6A11	ENSG00000132164|ENST00000254488|SLC6A11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.71490478515625	2	467.224874	932.435195	0.55382	0.00025876	-0.59189	-0.00027655	-0.03807	-1.7787E-05	467.2251137525375	89.277	0.46042	89.727	89.611	90.072	0.45058					12	10	2	0	0	0	0.4196	1	10547	10547		15.642	0	1	44900			33019	3768	21786	21796	37640	37640					-0.03372549176094708
LNVVLQLL	8	Unmodified	_LNVVLQLL_					0	0	0		nc|ENSG00000141314|P58872-2|RHBDL3;nc|ENSG00000141314|P58872-3|RHBDL3;ENSG00000141314|ENST00000269051|RHBDL3	nc|ENSG00000141314|P58872-2|RHBDL3	nc|ENSG00000141314|P58872-2|RHBDL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3009948730469	2	456.299853	910.585153	-0.68927	-0.00031451	3.5345	0.0016128	2.8453	0.0012983	456.30128778001557	35.219	1.6098	35.163	34.768	36.378	-0.056385					101	36	5	0	0	0	0.884	1	2292	2292		33.516	1.5607	1	710350			33020	4490	21787	21797	37641	37641					0.12628422833677178
LNWEPHTA	8	Unmodified	_LNWEPHTA_					0	0	0		L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|108|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|108|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|108|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2385559082031	2	484.235242	966.45593	-0.25899	-0.00012541	1.9723	0.00095505	1.7133	0.00082964	484.2362631686429	84.254	0.98042	84.689	83.918	84.898	0.43537					86	23	5	0	0	0	0.92457	1	9811	9811		47.916	1.9636	1	12890000			33021	14557	21788	21798	37642	37642					-0.028639587964335078
LNWFHRNIFWR	11	Unmodified	_LNWFHRNIFWR_					0	0	0		ENST00000583028.1_1_17:62175367-62207458:-|nuORF	ENST00000583028.1_1_17:62175367-62207458:-|nuORF	ENST00000583028.1_1_17:62175367-62207458:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.385498046875	3	530.280988	1587.82114	0.7473	0.00039628	-1.3121	-0.00069577	-0.56479	-0.0002995	530.613313673615	24.389	0.073891	24.403	24.359	24.432	0.013996					5	3	2	0	0	0	0.18238	1	825	825		9.2118	0.80454	1	22585			33022	14117	21789	21799	37643	37643					0.05073747730807554
LNWGQLSEA	9	Unmodified	_LNWGQLSEA_					0	0	0			REV__ENSG00000136928|ENST00000259455|GABBR2	REV__ENSG00000136928|ENST00000259455|GABBR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.27337646484375	2	509.253631	1016.49271	1.2061	0.00061422	0.8864	0.0004514	2.0925	0.0010656	509.7554750589591	31.881	0.30084	31.988	31.845	32.146	0.10707					10	6	2	0	0	0	0.20789	1	2201	2201		40.778	10.937	1	60673	+		33023	19347	21790	21800	37644	37644					-0.014877069705221402
LNWIGVPTKVF	11	Unmodified	_LNWIGVPTKVF_					0	0	0		nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3;nc|ENSG00000123836|O60825-2|PFKFB2;ENSG00000123836|ENST00000367080|PFKFB2	nc|ENSG00000170525|Q16875-3|PFKFB3	nc|ENSG00000170525|Q16875-3|PFKFB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	637.3687744140625	2	637.368798	1272.72304	-0.10165	-6.4787E-05	2.7538	0.0017552	2.6522	0.0016904	637.3704665370327	105.92	2.1512	105.89	105.23	107.38	-0.025146					153	50	4	0	0	0	0.76699	1	11472	11472		18.262	0.79408	1	1622600			33024	6598	21791	21801	37645	37645					0.09759126362246207
LNYIYDHDG	9	Unmodified	_LNYIYDHDG_					0	0	0			REV__ENSG00000205250|ENST00000379378|E2F4	REV__ENSG00000205250|ENST00000379378|E2F4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.2455444335938	2	555.248546	1108.48254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.026	1	20.097	19.597	20.597	0.070713								0	0	0	0.28772	1	464	464		35.618	6.4687	1		+		33025	23545	21792	21802	37646	37646					-0.06736314695763213
LNYLGTVSLTK	11	Unmodified	_LNYLGTVSLTK_					0	0	0		ENST00000553986.1_1_14:60616802-60619887:-|nuORF;nc|ENSG00000100612|Q9Y394-2|DHRS7;ENSG00000100612|ENST00000557185|DHRS7;ENST00000556502.1_1_14:60619584-60632027:-|nuORF	ENST00000553986.1_1_14:60616802-60619887:-|nuORF;ENST00000556502.1_1_14:60619584-60632027:-|nuORF	ENST00000556502.1_1_14:60619584-60632027:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.8463134765625	2	604.847896	1207.68124	1.0466	0.00063305	-3.8391	-0.0023221	-2.7925	-0.001689	604.845452875801	96.207	3.1756	96.438	95.308	98.483	0.23103					209	74	4	0	0	0	0.76699	1	9920	9920		18.262	2.2553	1	585990			33026	13714;13749	21793	21803	37647	37647					0.08570525883078517
LNYLTLIG	8	Unmodified	_LNYLTLIG_					0	0	0			REV__ENSG00000197977|ENST00000354666|ELOVL2	REV__ENSG00000197977|ENST00000354666|ELOVL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.7650146484375	2	453.768386	905.522219	-1.8474	-0.00083831	-4.0327	-0.0018299	-5.8802	-0.0026682	453.76663563247314	42.146	1.7379	42.146	41.766	43.504	0					90	42	4	0	0	0	0.88944	1	2894	2894		57.811	7.7867	1	323540	+		33027	23284	21794	21804	37648	37648					0.0656785704561571
LNYRVPSRGH	10	Unmodified	_LNYRVPSRGH_					0	0	0		ENSG00000124688|ENST00000372171|MAD2L1BP;nc|ENSG00000124688|Q15013-3|MAD2L1BP	ENSG00000124688|ENST00000372171|MAD2L1BP	ENSG00000124688|ENST00000372171|MAD2L1BP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2207946777344	3	400.219506	1197.63669	-0.15912	-6.3683E-05	4.1548	0.0016628	3.9957	0.0015991	400.22103550514197	20.905	0.85526	20.277	20.031	20.887	-0.62835					47	21	3	0	0	0	0.86106	1	703	703		33.922	2.2874	1	362440			33028	3353	21795	21805	37649	37649					0.04577559580275192
LNYSTTVS	8	Unmodified	_LNYSTTVS_					0	0	0			REV__ENSG00000198730|ENST00000361367|CTR9	REV__ENSG00000198730|ENST00000361367|CTR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.72259521484375	2	442.721633	883.428712	-0.33299	-0.00014742	2.5599	0.0011333	2.2269	0.0009859	442.7224617951711	27.796	1.1706	27.758	27.434	28.605	-0.038523					64	27	3	0	0	0	0.92394	1	1355	1355		47.657	3.5405	1	142800	+		33029	23368	21796	21806	37650	37650					-0.017664871274632787
LNYVSSLPST	10	Unmodified	_LNYVSSLPST_					0	0	0		ENSG00000249437|ENST00000517649|NAIP;ENST00000512908.2_1_5:70398727-70422449:-|nuORF;ENST00000315147.8_1_5:70265933-70281744:-|nuORF;ENST00000511830.2_1_5:69390488-69422514:-|nuORF;nc|ENSG00000249437|Q13075-2|NAIP	ENSG00000249437|ENST00000517649|NAIP	ENSG00000249437|ENST00000517649|NAIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.2813720703125	2	540.782222	1079.54989	1.0157	0.00054928	-1.4517	-0.00078503	-0.43594	-0.00023575	540.7813808375619	59.963	0.80314	59.932	59.445	60.248	-0.031727					33	20	2	0	0	0	0.64457	1	5617	5617		47.657	5.2612	1	212770			33030	8837	21797	21807	37651	37651					0.013297155152031337
LPAAALWHKL	10	Unmodified	_LPAAALWHKL_					0	0	0		ENSG00000168394|ENST00000354258|TAP1;nc|ENSG00000168394|Q03518-2|TAP1	ENSG00000168394|ENST00000354258|TAP1	ENSG00000168394|ENST00000354258|TAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3404541015625	2	560.337301	1118.66005	0.86177	0.00048288	4.2142	0.0023614	5.076	0.0028442	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.86201	1	11162	11162		24.203	1.1603	1	126390000			33031	6398	21798	21808	37652	37652					0.10546605364879724
LPAAFVRHIL	10	Unmodified	_LPAAFVRHIL_					0	0	0		ENST00000536128.5_1_12:56554348-56554435:+|nuORF	ENST00000536128.5_1_12:56554348-56554435:+|nuORF	ENST00000536128.5_1_12:56554348-56554435:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8544311523438	2	568.850576	1135.6866	0.5226	0.00029728	3.8523	0.0021914	4.3749	0.0024887	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.85939	1	10963	10963		23.042	1.0826	1	84800000			33032	13436	21799	21809	37653	37653					0.1241829425623564
LPAAFVRHIL	10	Unmodified	_LPAAFVRHIL_					0	0	0		ENST00000536128.5_1_12:56554348-56554435:+|nuORF	ENST00000536128.5_1_12:56554348-56554435:+|nuORF	ENST00000536128.5_1_12:56554348-56554435:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8539428710938	2	568.850576	1135.6866	0.87009	0.00049495	3.5097	0.0019965	4.3798	0.0024914	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.86589	1	10997	10997		29.15	1.2673	1	78933000			33033	13436	21799	21809	37654	37654					0.1241829425623564
LPAAGRRE	8	Unmodified	_LPAAGRRE_					0	0	0		ENST00000530703.1_1_19:1040142-1041440:+|nuORF;ENST00000526885.5_1_19:1040142-1041597:+|nuORF	ENST00000530703.1_1_19:1040142-1041440:+|nuORF	ENST00000530703.1_1_19:1040142-1041440:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.251953125	2	435.251226	868.487899	0.060967	2.6536E-05	2.665	0.0011599	2.7259	0.0011865	435.2512504176026	77.105	2.0148	77.505	76.162	78.177	0.3997					95	54	4	0	0	0	0.86288	1	8826	8826		26.796	1.222	1	572660			33034	13271	21800	21810	37655	37655					0.048394536773685104
LPAAGRRE	8	Unmodified	_LPAAGRRE_					0	0	0		ENST00000530703.1_1_19:1040142-1041440:+|nuORF;ENST00000526885.5_1_19:1040142-1041597:+|nuORF	ENST00000530703.1_1_19:1040142-1041440:+|nuORF	ENST00000530703.1_1_19:1040142-1041440:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25152587890625	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.90465	1	9324	9324		40.573	0	1	2235800			33035	13271	21800	21810	37656	37656					0.048394536773685104
LPAALGKPVR	10	Unmodified	_LPAALGKPVR_					0	0	0		ENST00000481683.5_1_1:2518487-2520915:+|nuORF;ENST00000477045.1_1_1:2518532-2519982:+|nuORF;nc|ENSG00000157870|Q8TBF2-4|PRXL2B;ENST00000484099.5_1_1:2518532-2520863:+|nuORF;nc|ENSG00000157870|Q8TBF2-2|PRXL2B;nc|ENSG00000157870|Q8TBF2-6|PRXL2B;ENSG00000157870|ENST00000419916|PRXL2B;nc|ENSG00000157870|Q8TBF2-7|PRXL2B;ENST00000493183.5_1_1:2517940-2520863:+|nuORF;nc|ENSG00000157870|Q8TBF2-3|PRXL2B	ENST00000481683.5_1_1:2518487-2520915:+|nuORF	ENST00000481683.5_1_1:2518487-2520915:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.3271789550781	2	511.329476	1020.6444	-1.5781	-0.00080692	-3.0137	-0.001541	-4.5918	-0.0023479	511.3278411382384	97.118	1.95	97.32	96.964	98.914	0.20206					112	44	4	0	0	0	0.85694	1	10000	10000		21.96	3.6355	1	1123400			33036	12464	21801	21811	37657	37657					0.13490318847846083
LPAALTLGL	9	Unmodified	_LPAALTLGL_					0	0	0			REV__ENST00000377990.6_2_2:65296717-65296849:+|nuORF	REV__ENST00000377990.6_2_2:65296717-65296849:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7803039550781	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.69914	1	1811	1811		40.573	7.057	1	2251100	+		33037	25881	21802	21812	37658	37658					0.10388447425270897
LPAAPLSSI	9	Unmodified	_LPAAPLSSI_					0	0	0			REV__ENST00000395547.6_1_16:28847785-28848118:+|nuORF	REV__ENST00000395547.6_1_16:28847785-28848118:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7603454589844	2	434.760561	867.506569	0.61637	0.00026798	-4.3451	-0.0018891	-3.7288	-0.0016211	434.7589702890546	87.554	3.2021	87.703	86.279	89.481	0.14956					123	75	2	0	0	0	0.77546	1	8626	8626		31.955	0	1	1373100	+		33038	26114	21803	21813	37659	37659					0.06751570528570028
LPAARTRA	8	Unmodified	_LPAARTRA_					0	0	0		ENST00000562955.2_2_1:43919018-43919642:+|nuORF	ENST00000562955.2_2_1:43919018-43919642:+|nuORF	ENST00000562955.2_2_1:43919018-43919642:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2613830566406	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.79929	1	9449	9449		18.324	0	1	55300000			33039	13858	21804	21814	37660	37660					0.07556044057025701
LPAASSDCPPY	11	Unmodified	_LPAASSDCPPY_					0	0	0		ENST00000261799.8_1_5:149535359-149535419:-|nuORF	ENST00000261799.8_1_5:149535359-149535419:-|nuORF	ENST00000261799.8_1_5:149535359-149535419:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3118896484375	2	560.752607	1119.49066	0.67567	0.00037888	-3.6416	-0.002042	-2.9659	-0.0016632	560.750400528403	56.582	1.614	57.142	56.659	58.273	0.55954					80	38	3	0	0	0	0.17431	1	5936	5936		24.519	5.1592	1	1461500			33040	9418	21805	21815	37661	37661					-0.06430503770639007
LPAAVRALPP	10	Unmodified	_LPAAVRALPP_					0	0	0		ENST00000425217.5_2_12:118105298-118293285:-|nuORF	ENST00000425217.5_2_12:118105298-118293285:-|nuORF	ENST00000425217.5_2_12:118105298-118293285:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	502.8140563964844	2	502.816202	1003.61785	-0.77958	-0.00039198	-3.9123	-0.0019672	-4.6919	-0.0023592	502.8142607549554	97.648	3.8306	97.648	97.03	100.86	0					234	91	5	0	0	0	0.84112	4	9784	9760;9784;9797;9857		37.159	5.2042	1	9982600			33041	11531	21806	21816	37662;37663;37664;37665	37663					0.11618629956512905
LPAAVRALPP	10	Unmodified	_LPAAVRALPP_					0	0	0		ENST00000425217.5_2_12:118105298-118293285:-|nuORF	ENST00000425217.5_2_12:118105298-118293285:-|nuORF	ENST00000425217.5_2_12:118105298-118293285:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	502.813720703125	2	502.816202	1003.61785	-1.6058	-0.00080742	-3.4199	-0.0017196	-5.0257	-0.002527	502.81450830567076	97.159	3.8746	97.361	96.791	100.67	0.20206					232	89	5	0	0	0	0.53935	10	9962	9938;9950;9962;9974;9986;9998;10010;10035;10047;10060		53.351	14.545	1	16341000			33042	11531	21806	21816	37666;37667;37668;37669;37670;37671;37672;37673;37674;37675	37668					0.11618629956512905
LPAAYLCAPT	10	Carbamidomethyl (C)	_LPAAYLC(Carbamidomethyl (C))APT_	LPAAYLC(1)APT		LPAAYLC(68)APT		0	1	0		ENSG00000105327|ENST00000439096|BBC3	ENSG00000105327|ENST00000439096|BBC3	ENSG00000105327|ENST00000439096|BBC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.772216796875	2	538.775885	1075.53722	-1.0547	-0.00056827	-2.1404	-0.0011532	-3.1952	-0.0017215	538.774462768956	73.622	0.54809	74.009	73.654	74.202	0.38779					19	15	2	0	0	0	0.3476	1	8281	8281		68.485	20.569	1	277290			33043	2203	21807	21817	37676	37676	27				0.0024698085128420644
LPADPAVAL	9	Unmodified	_LPADPAVAL_					0	0	0		ENST00000454449.2_1_1:157069007-157069154:-|nuORF	ENST00000454449.2_1_1:157069007-157069154:-|nuORF	ENST00000454449.2_1_1:157069007-157069154:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7528991699219	2	433.752736	865.490919	-0.89842	-0.00038969	1.1465	0.00049731	0.2481	0.00010762	433.7530751140989	61.556	3.4273	61.944	61.394	64.821	0.38845					196	83	3	0	0	0	0.44444	2	6669	6669;6876		54.765	3.4292	1	960390			33044	11943	21808	21818	37677;37678	37677					0.05279284011510299
LPAEFTPAVH	10	Unmodified	_LPAEFTPAVH_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.2866821289062	2	541.287474	1080.5604	-0.19806	-0.00010721	1.3632	0.00073788	1.1651	0.00063068	541.288203603716	56.296	0.52946	56.286	55.939	56.469	-0.010136					34	21	2	0	0	0	0.013735	4	5049	5024;5034;5041;5049		128.86	54.886	1	607580			33045	7934	21809	21819	37679;37680;37681;37682	37682					0.023337429602634074
LPAEFTPAVH	10	Unmodified	_LPAEFTPAVH_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.288330078125	2	541.287474	1080.5604	0.52269	0.00028293	0.35484	0.00019207	0.87753	0.00047499	541.2875269966385	56.217	0.53543	56.189	55.808	56.344	-0.027279					32	20	2	0	0	0	0.00037307	4	5144	5128;5136;5144;5149		143.02	72.777	1	823680			33046	7934	21809	21819	37683;37684;37685;37686	37685					0.023337429602634074
LPAEFTPAVH	10	Unmodified	_LPAEFTPAVH_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.2881469726562	2	541.287474	1080.5604	-0.07539	-4.0808E-05	0.57807	0.0003129	0.50268	0.00027209	541.2878668132122	56.208	0.46675	56.239	55.869	56.335	0.030838					30	16	3	0	0	0	0.021998	4	5074	5047;5058;5068;5074		119.56	43.164	1	851060			33047	7934	21809	21819	37687;37688;37689;37690	37690					0.023337429602634074
LPAELHQP	8	Unmodified	_LPAELHQP_					0	0	0		nc|ENSG00000174611|Q8NBH2-3|KY;ENSG00000174611|ENST00000423778|KY	nc|ENSG00000174611|Q8NBH2-3|KY	nc|ENSG00000174611|Q8NBH2-3|KY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.7467346191406	2	452.747985	903.481417	-0.5586	-0.0002529	-0.76702	-0.00034727	-1.3256	-0.00060017	452.74753328712364	42.319	0.53911	42.322	42.076	42.615	0.0034142					16	12	2	0	0	0	0.92973	1	3183	3183		50.025	0	1	84909			33048	6952	21810	21820	37691	37691					0.025815157259899024
LPAFGILVYL	10	Unmodified	_LPAFGILVYL_					0	0	0		ENSG00000018236|ENST00000551295|CNTN1;nc|ENSG00000018236|Q12860-2|CNTN1	ENSG00000018236|ENST00000551295|CNTN1	ENSG00000018236|ENST00000551295|CNTN1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8336791992188	2	553.336436	1104.65832	0.69861	0.00038657	-2.348	-0.0012992	-1.6494	-0.00091266	553.3350076076108	83.654	1.4969	83.801	82.631	84.128	0.14694					46	34	3	0	0	0	0.37624	1	8101	8101		44.531	19.081	1	98865			33049	831	21811	21821	37692	37692					0.11017551556278704
LPAGQVLVRL	10	Unmodified	_LPAGQVLVRL_					0	0	0		nc|ENSG856|P87889|ERVK-10_gag	nc|ENSG856|P87889|ERVK-10_gag	nc|ENSG856|P87889|ERVK-10_gag	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3402099609375	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.86589	1	10662	10662		29.15	6.1071	1	2530900			33050	15364	21812	21822	37693	37693					0.1408658801931324
LPAGRLLQ	8	Unmodified	_LPAGRLLQ_					0	0	0		chr1:42759390-42766507|37|11.3|0.14|6.33|-|2|P3H1,P3H1|1	chr1:42759390-42766507|37|11.3|0.14|6.33|-|2|P3H1,P3H1|1	chr1:42759390-42766507|37|11.3|0.14|6.33|-|2|P3H1,P3H1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2729797363281	2	434.27417	866.533787	3.7921	0.0016468	1.7217	0.0007477	5.5138	0.0023945	434.2731856472946	104.1	1.1728	104.36	103.84	105.01	0.26524					33	27	2	0	0	0	0.4196	1	12661	12661		25.45	1.2474	1	60343			33051	51	21813	21823	37694	37694					0.09518098859598467
LPAGRLLQ	8	Unmodified	_LPAGRLLQ_					0	0	0		chr1:42759390-42766507|37|11.3|0.14|6.33|-|2|P3H1,P3H1|1	chr1:42759390-42766507|37|11.3|0.14|6.33|-|2|P3H1,P3H1|1	chr1:42759390-42766507|37|11.3|0.14|6.33|-|2|P3H1,P3H1|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	434.27417	866.533787	2.7183	0.0011805	2.9907	0.0012988	5.7091	0.0024793	434.2736591243211	104.65	2.5012	104.61	103.76	106.27	-0.040382	0.12232	0.00039885	NaN	25.45	88	59	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61537			33052	51	21813	21823							0.09518098859598467
LPAHLRYL	8	Unmodified	_LPAHLRYL_					0	0	0		nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;ENSG00000183307|ENST00000331437|TMEM121B	nc|ENSG00000183307|Q9BXQ6-2|TMEM121B	nc|ENSG00000183307|Q9BXQ6-2|TMEM121B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7965087890625	2	491.795269	981.575986	-0.22794	-0.0001121	1.0719	0.00052718	0.84401	0.00041508	491.795700180553	50.73	2.2718	51.177	50.348	52.62	0.4476					135	54	3	0	0	0	0.88915	1	5060	5060		35.201	0	1	1342800			33053	7520	21814	21824	37695	37695					0.08446074267999393
LPAILQLT	8	Unmodified	_LPAILQLT_					0	0	0			REV__ENST00000368966.9_3_6:109615628-109650288:+|nuORF	REV__ENST00000368966.9_3_6:109615628-109650288:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7781677246094	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.83	1	65.384	64.884	65.884	0.55386								0	0	0	0.29568	1	7040	7040		35.201	1.6851	1		+		33054	25611	21815	21825	37696	37696					0.10388447425270897
LPAINGVTCY	10	Unmodified	_LPAINGVTCY_					0	0	0		nc|ENSG00000138821|Q9C0K1-2|SLC39A8;nc|ENSG00000138821|Q9C0K1-3|SLC39A8;ENSG00000138821|ENST00000356736|SLC39A8	nc|ENSG00000138821|Q9C0K1-2|SLC39A8	nc|ENSG00000138821|Q9C0K1-2|SLC39A8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.360595703125	2	525.76806	1049.52157	1.0191	0.00053581	0.74848	0.00039353	1.7676	0.00092933	525.7684228091297	36.73	0.53351	37.012	36.724	37.257	0.28173					26	12	3	0	0	0	0.37624	1	2860	2860		47.657	1.7054	1	204580			33055	4338	21816	21826	37697	37697					-0.0012130566574342083
LPAKDIQTNVY	11	Unmodified	_LPAKDIQTNVY_					0	0	0		ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	631.3432006835938	2	631.342978	1260.6714	-0.74128	-0.000468	0.72592	0.00045831	-0.015363	-9.6994E-06	631.3432654256037	47.269	0.68192	47.741	47.476	48.158	0.47139					40	16	3	0	0	0	0.3478	2	4490	4490;4503		63.426	15.467	1	1385200			33056	1760	21817	21827	37698;37699	37698					0.0514933787769678
LPAKDIQTNVY	11	Unmodified	_LPAKDIQTNVY_					0	0	0		ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	631.343017578125	2	631.342978	1260.6714	-0.0096434	-6.0883E-06	-0.019397	-1.2246E-05	-0.02904	-1.8334E-05	631.3428631735809	47.035	0.69829	47.958	47.695	48.393	0.92315					41	16	3	0	0	0	0.26196	3	4473	4473;4486;4499		76.17	28.21	1	1427800			33057	1760	21817	21827	37700;37701;37702	37700					0.0514933787769678
LPAKILVEF	9	Unmodified	_LPAKILVEF_					0	0	0		nc|ENSG00000122952|O95229-2|ZWINT;ENSG00000122952|ENST00000373944|ZWINT	nc|ENSG00000122952|O95229-2|ZWINT	nc|ENSG00000122952|O95229-2|ZWINT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3213500976562	2	515.320786	1028.62702	-0.72959	-0.00037597	0.70913	0.00036543	-0.020459	-1.0543E-05	515.3210227492417	72.675	0.74564	73.061	72.708	73.454	0.38581					41	17	3	0	0	0	0.18601	2	8119	8119;8132		76.774	27.333	1	625100			33058	3253	21818	21828	37703;37704	37703					0.11384978522164602
LPAKILVEF	9	Unmodified	_LPAKILVEF_					0	0	0		nc|ENSG00000122952|O95229-2|ZWINT;ENSG00000122952|ENST00000373944|ZWINT	nc|ENSG00000122952|O95229-2|ZWINT	nc|ENSG00000122952|O95229-2|ZWINT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3204345703125	2	515.320786	1028.62702	0.15623	8.0509E-05	-0.10361	-5.3392E-05	0.052622	2.7117E-05	515.320593798844	72.469	0.82671	73.019	72.73	73.557	0.55009					45	19	3	0	0	0	0.15959	2	8128	8128;8138		82.241	30.905	1	647990			33059	3253	21818	21828	37705;37706	37705					0.11384978522164602
LPAKKTVQK	9	Unmodified	_LPAKKTVQK_					0	0	0			REV__nc|ENSG00000197177|Q86SQ6-2|ADGRA1	REV__nc|ENSG00000197177|Q86SQ6-2|ADGRA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.30902099609375	2	506.829309	1011.64407	0.41813	0.00021192	-2.4711	-0.0012524	-2.053	-0.0010405	506.82793631441945	16.525	0.22998	16.038	15.913	16.143	-0.48718					6	4	2	0	0	0	0.7932	1	139	139		26.693	0	1	28353	+		33060	23205	21819	21829	37707	37707					0.1387089912798274
LPAKLCSK	8	Unmodified	_LPAKLCSK_					0	0	0			REV__ENST00000482704.1_1_2:96692637-96693504:-|nuORF	REV__ENST00000482704.1_1_2:96692637-96693504:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2269592285156	2	430.257131	858.499709	0.10919	4.6979E-05	1.0817	0.00046542	1.1909	0.0005124	430.2575184053463	26.066	0.53055	25.809	25.638	26.169	-0.2572					15	11	2	0	0	0	0.4196	1	1374	1374		29.15	0	1	30397	+		33061	27237	21820	21830	37708	37708					0.06479934376341134
LPAKLQIPVP	10	Unmodified	_LPAKLQIPVP_					0	0	0			REV__ENSG00000163482|ENST00000295709|STK36	REV__ENSG00000163482|ENST00000295709|STK36	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.270751953125	2	538.347335	1074.68012	-0.39581	-0.00021308	0.11986	6.4528E-05	-0.27595	-0.00014856	538.3473284664767	82.383	0.37004	82.857	82.591	82.961	0.47383					16	8	2	0	0	0	0.37624	1	9570	9570		24.203	0	1	98999	+		33062	20920	21821	21831	37709	37709					0.14576356304837645
LPAKPTQSEK	10	Unmodified	_LPAKPTQSEK_					0	0	0			REV__chr10:103585356-103589514|55|49.6|0.33|7.21|+|0|None,NEURL1|1	REV__chr10:103585356-103589514|55|49.6|0.33|7.21|+|0|None,NEURL1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.8119506835938	2	549.811313	1097.60807	1.0512	0.00057796	-3.6602	-0.0020124	-2.609	-0.0014345	549.8091112675204	16.291	0.19256	16.208	16.135	16.328	-0.083363					14	9	2	0	0	0	0.86587	1	126	126		29.17	0.91578	1	56524	+		33063	15464	21822	21832	37710	37710					0.06317397160478322
LPAKQPPPG	9	Unmodified	_LPAKQPPPG_					0	0	0		nc|ENSG00000168004|Q96KN8-2|PLAAT5;ENSG00000168004|ENST00000540857|PLAAT5;nc|ENSG00000168004|Q96KN8|PLAAT5	nc|ENSG00000168004|Q96KN8-2|PLAAT5	nc|ENSG00000168004|Q96KN8-2|PLAAT5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.7687072753906	2	452.766178	903.517802	0.72575	0.00032859	4.1231	0.0018668	4.8489	0.0021954	452.7680266771095	29.969	1.2555	29.954	29.325	30.581	-0.015167					53	34	3	0	0	0	0.69914	1	1530	1530		40.573	7.7602	1	76935			33064	6354	21823	21833	37711	37711					0.06218392622713509
LPALARLPSL	10	Unmodified	_LPALARLPSL_					0	0	0			REV__ENST00000415597.5_1_3:8543537-8556640:+|nuORF	REV__ENST00000415597.5_1_3:8543537-8556640:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7819213867188	2	525.837134	1049.65972	-0.77154	-0.0004057	1.9598	0.0010305	1.1883	0.00062483	525.8384567440124	47.414	0.15686	48.337	48.199	48.356	0.92315					5	3	2	0	0	0	0.37624	1	4513	4513		20.947	0	1	76373	+		33065	26421	21824	21834	37712	37712					0.1368718564503979
LPALGALW	8	Unmodified	_LPALGALW_					0	0	0		ENST00000355221.7_3_8:54754253-54755666:-|nuORF	ENST00000355221.7_3_8:54754253-54755666:-|nuORF	ENST00000355221.7_3_8:54754253-54755666:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.75567626953125	2	420.752539	839.490525	2.8224	0.0011875	3.6252	0.0015253	6.4476	0.0027129	420.75391516461383	21.105	1.6401	21.041	20.066	21.706	-0.064058					103	72	2	0	0	0	0.80127	1	571	571		16.705	1.0687	1	85377			33066	10348	21825	21835	37713	37713					0.06435909082313174
LPALLALTHK	10	Unmodified	_LPALLALTHK_					0	0	0			REV__ENST00000487138.5_1_2:95940333-95943144:+|nuORF	REV__ENST00000487138.5_1_2:95940333-95943144:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.724853515625	2	538.844959	1075.67537	-0.062007	-3.3412E-05	-0.82311	-0.00044353	-0.88512	-0.00047694	539.3464491194792	24.87	0.12662	24.928	24.814	24.94	0.058167					8	5	2	0	0	0	0.37624	1	873	873		25.574	8.2091	1	50096	+		33067	20413	21826	21836	37714	37714					0.14055472162067417
LPALLALTHK	10	Unmodified	_LPALLALTHK_					0	0	0			REV__ENST00000487138.5_1_2:95940333-95943144:+|nuORF	REV__ENST00000487138.5_1_2:95940333-95943144:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	538.844959	1075.67537	0.15742	8.4822E-05	-1.8818	-0.001014	-1.7244	-0.00092917	538.8433220405426	25.013	0.4579	25.113	24.867	25.325	0.10045	0.092548	-0.00042073	NaN	19.104	30	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79912	+		33068	20413	21826	21836							0.14055472162067417
LPALLWRMQ	9	Unmodified	_LPALLWRMQ_					0	0	0		ENST00000486187.5_1_10:43090126-43133998:-|nuORF	ENST00000486187.5_1_10:43090126-43133998:-|nuORF	ENST00000486187.5_1_10:43090126-43133998:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	564.4983520507812	2	564.323337	1126.63212	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.334	1	66.461	65.961	66.961	0.12649								0	0	0	0.33676	1	5888	5888		18.324	0.8564	1				33069	12576	21827	21837	37715	37715					0.07386959113136982
LPALMIVL	8	Unmodified	_LPALMIVL_					0	0	0		ENST00000485620.1_1_7:6851426-6854399:-|nuORF	ENST00000485620.1_1_7:6851426-6854399:-|nuORF	ENST00000485620.1_1_7:6851426-6854399:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2796936035156	2	435.280075	868.545597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.116	1	66.243	65.743	66.743	0.12649								0	0	0	0.2945	1	5868	5868		33.493	6.6969	1				33070	12561	21828	21838	37716	37716					0.10606579558577778
LPALPVLAKST	11	Unmodified	_LPALPVLAKST_					0	0	0		nc|ENSG00000137802|O60336-2|MAPKBP1;nc|ENSG00000137802|O60336-3|MAPKBP1;ENSG00000137802|ENST00000457542|MAPKBP1;nc|ENSG00000137802|O60336|MAPKBP1;nc|ENSG00000137802|O60336-4|MAPKBP1	nc|ENSG00000137802|O60336-2|MAPKBP1	nc|ENSG00000137802|O60336-2|MAPKBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.3536376953125	2	555.350074	1108.6856	3.1602	0.001755	2.6303	0.0014608	5.7905	0.0032158	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.66929	2	10944	10944;11051		36.447	15.5	1	5616800			33071	4235	21829	21839	37717;37718	37717					0.13560035096656975
LPALPVLAKST	11	Unmodified	_LPALPVLAKST_					0	0	0		nc|ENSG00000137802|O60336-2|MAPKBP1;nc|ENSG00000137802|O60336-3|MAPKBP1;ENSG00000137802|ENST00000457542|MAPKBP1;nc|ENSG00000137802|O60336|MAPKBP1;nc|ENSG00000137802|O60336-4|MAPKBP1	nc|ENSG00000137802|O60336-2|MAPKBP1	nc|ENSG00000137802|O60336-2|MAPKBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.3529663085938	2	555.350074	1108.6856	1.3083	0.00072658	4.4118	0.0024501	5.7201	0.0031767	555.3524110053091	100.9	2.53	100.95	100.38	102.91	0.046356					182	60	5	0	0	0	0.7144	1	10969	10969		29.17	2.374	1	5418400			33072	4235	21829	21839	37719	37719					0.13560035096656975
LPALTTRPD	9	Unmodified	_LPALTTRPD_					0	0	0		ENST00000550536.5_2_12:70133307-70133607:+|nuORF	ENST00000550536.5_2_12:70133307-70133607:+|nuORF	ENST00000550536.5_2_12:70133307-70133607:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.2789001464844	2	492.279649	982.544745	0.55212	0.0002718	-0.60023	-0.00029548	-0.048112	-2.3684E-05	492.27928620264663	26.295	0.48045	26.34	26.034	26.515	0.045509					19	11	2	0	0	0	0.64922	1	1103	1103		44.117	1.2525	1	42739			33073	13658	21830	21840	37720	37720					0.052774564432297666
LPANHPLLTG	10	Unmodified	_LPANHPLLTG_					0	0	0		nc|ENSG00000114573|P38606-2|ATP6V1A;ENSG00000114573|ENST00000273398|ATP6V1A	nc|ENSG00000114573|P38606-2|ATP6V1A	nc|ENSG00000114573|P38606-2|ATP6V1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7932739257812	2	516.795466	1031.57638	-0.87095	-0.0004501	-3.3844	-0.001749	-4.2553	-0.0021991	516.7937641781077	86.407	2.8089	86.407	84.831	87.64	0					132	64	4	0	0	0	0.86763	1	8344	8344		26.693	1.1189	1	210980			33074	2780	21831	21841	37721	37721					0.061854491971644165
LPANLLGTF	9	Unmodified	_LPANLLGTF_					0	0	0		ENST00000541206.6_1_16:88769377-88769932:-|nuORF	ENST00000541206.6_1_16:88769377-88769932:-|nuORF	ENST00000541206.6_1_16:88769377-88769932:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.27752685546875	2	473.273835	944.533118	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.877	1	79.931	79.431	80.431	0.053841								0	0	0	0.30416	1	7903	7903		29.15	1.2673	1				33075	13516	21832	21842	37722	37722					0.058632594199025334
LPAPADFLSL	10	Unmodified	_LPAPADFLSL_					0	0	0		ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4;ENST00000536072.6_1_16:67909906-67914140:+|nuORF	ENSG00000038358|ENST00000358933|EDC4	ENSG00000038358|ENST00000358933|EDC4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	521.744873046875	2	522.292225	1042.5699	-0.2645	-0.00013815	-4.111	-0.0021471	-4.3755	-0.0022853	522.2899926698668	57.477	0.47101	57.511	57.325	57.796	0.033905					25	15	2	0	0	0	0.37624	1	5238	5238		19.997	0	1	62139			33076	916	21833	21843	37723	37723					0.050315112458065414
LPAPAPVINSK	11	Unmodified	_LPAPAPVINSK_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;nc|ENSG00000110066|Q4FZB7-2|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8303833007812	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.72106	1	8941	8941		28.081	0	1	1489800			33077	2506	21834	21844	37724	37724					0.10094577919812764
LPAPGVPAW	9	Unmodified	_LPAPGVPAW_					0	0	0		ENSG00000124733|ENST00000244711|MEA1	ENSG00000124733|ENST00000244711|MEA1	ENSG00000124733|ENST00000244711|MEA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.2537841796875	2	454.255446	906.496338	-0.45768	-0.0002079	1.2669	0.00057549	0.80922	0.00036759	454.25598376052596	77.093	0.56078	77.493	77.241	77.802	0.39969					20	14	2	0	0	0	0.55559	1	8755	8755		49.211	10.189	1	325020			33078	3355	21835	21845	37725	37725					0.03935007593975115
LPAPGVPAW	9	Unmodified	_LPAPGVPAW_					0	0	0		ENSG00000124733|ENST00000244711|MEA1	ENSG00000124733|ENST00000244711|MEA1	ENSG00000124733|ENST00000244711|MEA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.2572021484375	2	454.255446	906.496338	-0.11566	-5.2539E-05	0.31145	0.00014148	0.19579	8.8938E-05	454.2556047046908	76.943	0.72363	77.511	77.289	78.012	0.56836					27	18	2	0	0	0	0.55559	1	8773	8773		49.211	15.695	1	281440			33079	3355	21835	21845	37726	37726					0.03935007593975115
LPAPHSKKP	9	Unmodified	_LPAPHSKKP_					0	0	0		ENST00000486898.1_1_2:27539943-27545949:-|nuORF	ENST00000486898.1_1_2:27539943-27545949:-|nuORF	ENST00000486898.1_1_2:27539943-27545949:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7906494140625	2	487.792727	973.5709	-0.71211	-0.00034736	-3.8761	-0.0018908	-4.5883	-0.0022381	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.78983	1	7957	7957		27.882	4.8398	1	678280			33080	12591	21836	21846	37727	37727					0.08305770405377189
LPAPHSKKP	9	Unmodified	_LPAPHSKKP_					0	0	0		ENST00000486898.1_1_2:27539943-27545949:-|nuORF	ENST00000486898.1_1_2:27539943-27545949:-|nuORF	ENST00000486898.1_1_2:27539943-27545949:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7914733886719	2	487.792727	973.5709	-0.24073	-0.00011743	-3.9662	-0.0019347	-4.2069	-0.0020521	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.55097	1	9662	9662		49.442	8.8689	1	1981400			33081	12591	21836	21846	37728	37728					0.08305770405377189
LPAPIHAR	8	Unmodified	_LPAPIHAR_					0	0	0			REV__nc|ENSG00000179886|Q53EQ6-2|TIGD5	REV__nc|ENSG00000179886|Q53EQ6-2|TIGD5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7734375	2	437.766512	873.518471	0.3693	0.00016167	-2.5961	-0.0011365	-2.2268	-0.00097483	437.76667398637704	26.617	0.056953	26.645	26.616	26.673	0.02817					4	2	2	0	0	0	0.4196	1	1026	1026		18.324	0	1	18163	+		33082	22362	21837	21847	37729	37729					0.07665232062413452
LPAQALPKFAR	11	Unmodified	_LPAQALPKFAR_					0	0	0			REV__nc|ENSG00000128973|Q9NWW5-2|CLN6	REV__nc|ENSG00000128973|Q9NWW5-2|CLN6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	606.3690795898438	2	606.36659	1210.71863	1.0648	0.00064567	3.7089	0.0022489	4.7737	0.0028946	606.3686977940384	94.008	3.2437	94.236	93.32	96.564	0.22863					196	77	3	0	0	0	0.76699	1	9542	9542		18.262	1.5447	1	863300	+		33083	29834	21838	21848	37730	37730					0.12169661939356047
LPAQTSRT	8	Unmodified	_LPAQTSRT_					0	0	0			REV__nc|ENSG00000186260|Q9ULH7-4|MRTFB	REV__nc|ENSG00000186260|Q9ULH7-4|MRTFB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7737121582031	2	437.243067	872.47158	0.069538	3.0405E-05	-1.4035	-0.00061368	-1.334	-0.00058327	437.2407484739818	26.653	0.073338	26.762	26.714	26.787	0.10901					5	3	2	0	0	0	0.4196	1	1028	1028		33.516	5.6333	1	14093	+		33084	22839	21839	21849	37731	37731					0.03024327720618203
LPARHPRHVR	10	Unmodified	_LPARHPRHVR_					0	0	0		ENST00000579152.1_1_17:17398683-17399571:-|nuORF	ENST00000579152.1_1_17:17398683-17399571:-|nuORF	ENST00000579152.1_1_17:17398683-17399571:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8692016601562	2	619.870697	1237.72684	-0.18235	-0.00011304	-1.6774	-0.0010398	-1.8597	-0.0011528	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.85251	1	9560	9560		19.997	0.89325	1	2627900			33085	14084	21840	21850	37732	37732					0.11748653699328315
LPARQLLAAI	10	Unmodified	_LPARQLLAAI_					0	0	0		ENSG00000173846|ENST00000372201|PLK3;ENST00000476731.1_1_1:45267326-45268846:+|nuORF;ENST00000465443.5_1_1:45266117-45270174:+|nuORF	ENSG00000173846|ENST00000372201|PLK3	ENSG00000173846|ENST00000372201|PLK3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.33935546875	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.85939	1	10176	10176		23.042	0	1	1199500			33086	6891	21841	21851	37733	37733					0.1408658801931324
LPARQLLAAI	10	Unmodified	_LPARQLLAAI_					0	0	0		ENSG00000173846|ENST00000372201|PLK3;ENST00000476731.1_1_1:45267326-45268846:+|nuORF;ENST00000465443.5_1_1:45266117-45270174:+|nuORF	ENSG00000173846|ENST00000372201|PLK3	ENSG00000173846|ENST00000372201|PLK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3401489257812	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.85934	1	10649	10649		35.618	7.736	1	2530900			33087	6891	21841	21851	37734	37734					0.1408658801931324
LPARRSPGPR	10	Unmodified	_LPARRSPGPR_					0	0	0		ENST00000533387.5_1_11:134123508-134129738:+|nuORF	ENST00000533387.5_1_11:134123508-134129738:+|nuORF	ENST00000533387.5_1_11:134123508-134129738:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8306274414062	2	553.830706	1105.64686	-1.4397	-0.00079733	0.48085	0.00026631	-0.95882	-0.00053102	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.86471	1	9196	9196		30.318	9.3708	1	5453100			33088	13394	21842	21852	37735	37735					0.09826167305527633
LPARSRVAARA	11	Unmodified	_LPARSRVAARA_					0	0	0		ENST00000426537.1_1_21:47705768-47706077:-|nuORF	ENST00000426537.1_1_21:47705768-47706077:-|nuORF	ENST00000426537.1_1_21:47705768-47706077:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.3561401367188	2	584.357088	1166.69962	-0.075702	-4.4237E-05	-1.8935	-0.0011065	-1.9692	-0.0011507	584.3560423589818	92.438	3.1079	92.483	91.102	94.21	0.045448					194	73	3	0	0	0	0.61369	1	9681	9681		42.864	7.246	1	588330			33089	11555	21843	21853	37736	37736					0.122941253683166
LPARSRVAARA	11	Unmodified	_LPARSRVAARA_					0	0	0		ENST00000426537.1_1_21:47705768-47706077:-|nuORF	ENST00000426537.1_1_21:47705768-47706077:-|nuORF	ENST00000426537.1_1_21:47705768-47706077:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	584.357088	1166.69962	0.36535	0.00021349	-1.2752	-0.00074519	-0.90989	-0.0005317	584.3561964705294	92.531	2.5764	92.978	91.502	94.079	0.44661	0.22976	0.00042536	NaN	42.864	106	60	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200380			33090	11555	21843	21853							0.122941253683166
LPARSRVAARA	11	Unmodified	_LPARSRVAARA_					0	0	0		ENST00000426537.1_1_21:47705768-47706077:-|nuORF	ENST00000426537.1_1_21:47705768-47706077:-|nuORF	ENST00000426537.1_1_21:47705768-47706077:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	584.357088	1166.69962	-0.89088	-0.00052059	-0.14369	-8.3966E-05	-1.0346	-0.00060456	584.3568253807232	92.565	2.6163	93.027	91.722	94.339	0.46152	0.27897	0.0017478	NaN	42.864	109	61	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	285720			33091	11555	21843	21853							0.122941253683166
LPARVWII	8	Unmodified	_LPARVWII_					0	0	0			REV__ENST00000262187.9_1_7:151163972-151164125:-|nuORF	REV__ENST00000262187.9_1_7:151163972-151164125:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.3071594238281	2	484.308013	966.601472	-1.3098	-0.00063437	0.9731	0.00047128	-0.33674	-0.00016309	484.30838751003296	81.01	1.2956	81.066	80.732	82.028	0.055916					77	29	4	0	0	0	0.9159	1	8106	8106		44.531	16.277	1	804700	+		33092	24410	21844	21854	37737	37737					0.11683548790426812
LPASPLATTSL	11	Unmodified	_LPASPLATTSL_					0	0	0		nc|ENSG00000130940|Q86V15-2|CASZ1;ENSG00000130940|ENST00000377022|CASZ1	nc|ENSG00000130940|Q86V15-2|CASZ1	nc|ENSG00000130940|Q86V15-2|CASZ1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7975463867188	2	535.808239	1069.60193	-0.71042	-0.00038065	-3.7687	-0.0020193	-4.4791	-0.0023999	535.8058472347725	56.918	0.54235	57.314	57.116	57.658	0.39672					18	12	2	0	0	0	0.1729	1	5919	5919		26.693	10.22	1	244030			33093	3697	21845	21855	37738	37738					0.06990878928968414
LPASPLPTPLV	11	Unmodified	_LPASPLPTPLV_					0	0	0			REV__ENST00000421462.5_1_2:159314285-159314756:+|nuORF	REV__ENST00000421462.5_1_2:159314285-159314756:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8340454101562	2	552.8368	1103.65905	-0.71064	-0.00039287	-4.0102	-0.002217	-4.7209	-0.0026099	552.8343973070275	84.083	2.0319	84.083	83.586	85.618	0					122	47	3	0	0	0	0.7342	1	7958	7958		25.574	3.6142	1	300740	+		33094	26498	21846	21856	37739	37739					0.11136346205330483
LPATLETPV	9	Unmodified	_LPATLETPV_					0	0	0		ENSG00000132688|ENST00000368223|NES	ENSG00000132688|ENST00000368223|NES	ENSG00000132688|ENST00000368223|NES	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7685546875	2	470.771126	939.527698	-0.85112	-0.00040068	-3.5797	-0.0016852	-4.4308	-0.0020859	470.7693717184576	51.01	1.4748	51.018	50.607	52.082	0.0077438					99	42	3	0	0	0	0.7932	1	4449	4449		24.203	2.2429	1	770790			33095	3819	21847	21857	37740	37740					0.0555153583743504
LPATLTIDG	9	Unmodified	_LPATLTIDG_					0	0	0			REV__ENSG00000120328|ENST00000239450|PCDHB12	REV__ENSG00000120328|ENST00000239450|PCDHB12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7543640136719	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.77546	1	8203	8203		31.955	0	1	394230	+		33096	18408	21848	21858	37741	37741					0.042629628033296285
LPATRLAPIP	10	Unmodified	_LPATRLAPIP_					0	0	0			REV__ENSG00000163909|ENST00000372852|HEYL	REV__ENSG00000163909|ENST00000372852|HEYL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8265991210938	2	524.829309	1047.64407	-0.038871	-2.04E-05	-3.7093	-0.0019467	-3.7481	-0.0019671	524.8272063900822	102.47	1.0685	102.49	101.99	103.06	0.01989					58	25	3	0	0	0	0.80179	1	10972	10972		39.253	6.4404	1	402610	+		33097	20996	21849	21859	37742	37742					0.12214899127957324
LPATRLAPIP	10	Unmodified	_LPATRLAPIP_					0	0	0			REV__ENSG00000163909|ENST00000372852|HEYL	REV__ENSG00000163909|ENST00000372852|HEYL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.826904296875	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.8608	2	10243	10243;10350		34.173	6.2903	1	23918000	+		33098	20996	21849	21859	37743;37744	37743					0.12214899127957324
LPAVGGGRYG	10	Unmodified	_LPAVGGGRYG_					0	0	0		ENST00000446815.5_1_7:131012619-131071882:+|nuORF;ENST00000494286.5_1_7:131012619-131082053:+|nuORF	ENST00000446815.5_1_7:131012619-131071882:+|nuORF	ENST00000446815.5_1_7:131012619-131071882:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.7588806152344	2	473.758884	945.503215	0.75968	0.0003599	0.44573	0.00021117	1.2054	0.00057107	473.7590702725791	22.845	0.86935	22.905	22.46	23.329	0.060431					38	32	2	0	0	0	0.86201	1	712	712		24.203	1.1603	1	28931			33099	11839	21850	21860	37745	37745					0.028283204745775947
LPAVYEKQPQP	11	Unmodified	_LPAVYEKQPQP_					0	0	0		nc|ENSG00000197415|Q14D04-2|VEPH1;ENSG00000197415|ENST00000362010|VEPH1	nc|ENSG00000197415|Q14D04-2|VEPH1	nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.8984680175781	3	423.899439	1268.67649	-0.47617	-0.00020185	-1.4537	-0.00061621	-1.9298	-0.00081806	423.89873875945534	28.817	0.64665	28.788	28.481	29.127	-0.029207					26	14	2	0	0	0	0.52654	1	1757	1757		50.034	14.855	1	367580			33100	8163	21851	21861	37746	37746					0.052896417403189844
LPAVYEKQPQP	11	Unmodified	_LPAVYEKQPQP_					0	0	0		nc|ENSG00000197415|Q14D04-2|VEPH1;ENSG00000197415|ENST00000362010|VEPH1	nc|ENSG00000197415|Q14D04-2|VEPH1	nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	423.899439	1268.67649	-2.045	-0.00086688	-2.3157	-0.00098163	-4.3607	-0.0018485	424.2342352638105	28.808	0.080282	28.808	28.771	28.851	0	0.0086204	-0.0002791	NaN	50.034	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9590.3			33101	8163	21851	21861							0.052896417403189844
LPCGRLPG	8	Unmodified	_LPCGRLPG_					0	0	0		ENST00000487137.6_1_14:23516386-23516554:-|nuORF	ENST00000487137.6_1_14:23516386-23516554:-|nuORF	ENST00000487137.6_1_14:23516386-23516554:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.727783203125	2	406.725998	811.437443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.67	1	76.718	76.218	77.218	0.047981								0	0	0	0.29199	1	7502	7502		29.842	4.3914	1				33102	12597	21852	21862	37747	37747					0.024182080280070295
LPCHCAAP	8	Unmodified	_LPCHCAAP_					0	0	0			REV__ENSG00000142871|ENST00000451137|CCN1	REV__ENSG00000142871|ENST00000451137|CCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.185791015625	2	406.183109	810.351665	2.794	0.0011349	-2.9972	-0.0012174	-0.20314	-8.2511E-05	406.18166873937423	26.287	1.2086	26.255	25.721	26.929	-0.032125					50	29	2	0	0	0	0.88393	1	1081	1081		33.493	5.2387	1	43829	+		33103	19758	21853	21863	37748	37748					-0.06109700149158925
LPCIWSRW	8	Unmodified	_LPCIWSRW_					0	0	0			REV__ENST00000591263.5_1_17:43325341-43344591:+|nuORF	REV__ENST00000591263.5_1_17:43325341-43344591:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2280883789062	2	530.77348	1059.53241	0.29106	0.00015449	2.6698	0.0014171	2.9609	0.0015716	530.7744552214045	29.304	0.61586	29.261	28.832	29.448	-0.043095					45	24	2	0	0	0	0.4196	1	1536	1536		16.473	0	1	26210	+		33104	29136	21854	21864	37749	37749					0.0050214149919156625
LPCLEQGSY	9	Carbamidomethyl (C)	_LPC(Carbamidomethyl (C))LEQGSY_	LPC(1)LEQGSY		LPC(59)LEQGSY		0	1	0		ENST00000398922.6_1_11:62433857-62434520:+|nuORF;ENSG00000214756|ENST00000532971|CSKMT	ENST00000398922.6_1_11:62433857-62434520:+|nuORF	ENST00000398922.6_1_11:62433857-62434520:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.7457275390625	2	533.747324	1065.4801	0.52957	0.00028266	-3.5237	-0.0018808	-2.9942	-0.0015981	533.745158244685	50.015	1.629	50.86	49.666	51.295	0.84501					92	39	3	0	0	0	0.38563	1	4931	4931		58.782	6.4828	1	745100			33105	8636	21855	21865	37750	37750	106				-0.05002486425087227
LPCLVPAK	8	Unmodified	_LPCLVPAK_					0	0	0			REV__nc|ENSG00000090006|Q8N2S1|LTBP4	REV__nc|ENSG00000090006|Q8N2S1|LTBP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.7553405761719	2	420.754224	839.493896	0.18337	7.7154E-05	2.1863	0.0009199	2.3697	0.00099705	420.7550318985828	22.352	1.7415	21.741	20.512	22.253	-0.6107					82	43	2	0	0	0	0.84341	1	912	912		24.203	2.5004	1	550570	+		33106	29723	21856	21866	37751	37751					0.06772835864671833
LPDAPPARLV	10	Unmodified	_LPDAPPARLV_					0	0	0			REV__ENST00000307201.4_1_17:27893625-27894141:-|nuORF	REV__ENST00000307201.4_1_17:27893625-27894141:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.826904296875	2	524.811116	1047.60768	1.2407	0.00065115	-0.48104	-0.00025246	0.75969	0.00039869	524.8105930521915	99.564	0.39162	99.612	99.504	99.896	0.047523					9	8	2	0	0	0	0.37624	1	10666	10666		45.972	8.1607	1	65101	+		33107	24840	21857	21867	37752	37752					0.08578022231267823
LPDEIYHVY	9	Unmodified	_LPDEIYHVY_					0	0	0		ENSG00000148335|ENST00000372483|NTMT1	ENSG00000148335|ENST00000372483|NTMT1	ENSG00000148335|ENST00000372483|NTMT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.7860717773438	2	574.784764	1147.55498	-1.2884	-0.00074054	1.0388	0.00059711	-0.24954	-0.00014343	574.7853360112399	62.503	0.73716	62.891	62.578	63.315	0.38779					43	16	4	0	0	0	0.25826	2	6683	6683;6701		68.485	23.407	1	421340			33108	4950	21858	21868	37753;37754	37753					-0.012899806221867038
LPDEIYHVY	9	Unmodified	_LPDEIYHVY_					0	0	0		ENSG00000148335|ENST00000372483|NTMT1	ENSG00000148335|ENST00000372483|NTMT1	ENSG00000148335|ENST00000372483|NTMT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.7841186523438	2	574.784764	1147.55498	-0.1712	-9.8402E-05	0.083923	4.8237E-05	-0.087275	-5.0164E-05	574.7848532608224	62.352	1.0393	62.907	62.386	63.425	0.55449					46	23	3	0	0	0	0.31972	1	6702	6702		63.306	15.391	1	399030			33109	4950	21858	21868	37755	37755					-0.012899806221867038
LPDELLLGI	9	Unmodified	_LPDELLLGI_					0	0	0		ENSG00000145604|ENST00000274255|SKP2;nc|ENSG00000145604|Q13309-2|SKP2	ENSG00000145604|ENST00000274255|SKP2	ENSG00000145604|ENST00000274255|SKP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7964172363281	2	491.794601	981.574648	-0.51761	-0.00025456	2.8513	0.0014022	2.3337	0.0011477	491.796149484194	73.333	1.715	73.291	71.605	73.32	-0.042015					77	64	2	0	0	0	0.7932	1	7158	7158		26.796	7.4361	1	191530			33110	4779	21859	21869	37756	37756					0.08312395388577443
LPDLDAGEN	9	Unmodified	_LPDLDAGEN_					0	0	0			REV__ENST00000199447.8_1_7:37888269-37888619:+|nuORF	REV__ENST00000199447.8_1_7:37888269-37888619:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2230224609375	2	472.221997	942.429441	-1.0231	-0.00048314	1.3924	0.00065754	0.36932	0.0001744	472.22256154509336	38.81	0.52143	38.82	38.524	39.046	0.010708					29	15	2	0	0	0	0.31972	1	2326	2326		63.306	4.5243	1	181230	+		33111	24093	21860	21870	37757	37757					-0.044076924784235416
LPDLKIHIN	9	Unmodified	_LPDLKIHIN_					0	0	0		nc|ENSG00000048707|Q5THJ4-2|VPS13D;ENSG00000048707|ENST00000620676|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8167114257812	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.64922	1	8276	8276		44.117	19.914	1	859730			33112	977	21861	21871	37758	37758					0.09498308748334239
LPDLNHSQVY	10	Unmodified	_LPDLNHSQVY_					0	0	0		nc|ENSG00000005007|Q92900|UPF1;ENSG00000005007|ENST00000262803|UPF1;ENST00000594243.1_1_19:18965730-18966052:+|nuORF	nc|ENSG00000005007|Q92900|UPF1	nc|ENSG00000005007|Q92900|UPF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	593.29736328125	2	593.29857	1184.58259	-0.019972	-1.1849E-05	0.6222	0.00036915	0.60223	0.0003573	593.2984704349108	53.314	0.86741	53.728	53.169	54.036	0.4139					41	20	3	0	0	0	0.26675	1	5381	5381		76.17	10.367	1	1045900			33113	671	21862	21872	37759	37759					-0.002320773619430838
LPDLNHSQVY	10	Unmodified	_LPDLNHSQVY_					0	0	0		nc|ENSG00000005007|Q92900|UPF1;ENSG00000005007|ENST00000262803|UPF1;ENST00000594243.1_1_19:18965730-18966052:+|nuORF	nc|ENSG00000005007|Q92900|UPF1	nc|ENSG00000005007|Q92900|UPF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	593.2991943359375	2	593.29857	1184.58259	-0.26542	-0.00015747	0.41254	0.00024476	0.14712	8.7287E-05	593.298732426466	53.102	0.66135	53.716	53.408	54.069	0.61436					37	15	3	0	0	0	0.18075	1	5378	5378		90.601	28.493	1	1009500			33114	671	21862	21872	37760	37760					-0.002320773619430838
LPDLQAATKY	10	Unmodified	_LPDLQAATKY_					0	0	0		ENSG00000101203|ENST00000358894|COL20A1;nc|ENSG00000101203|Q9P218-2|COL20A1;nc|ENSG00000101203|Q9P218-3|COL20A1;ENST00000479501.5_1_20:61943331-61950713:+|nuORF	ENSG00000101203|ENST00000358894|COL20A1	ENSG00000101203|ENST00000358894|COL20A1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.306396484375	2	560.305864	1118.59717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.47	1	115.47	114.97	115.97	0								0	0	0	0.45132	1	11874	11874		31.53	2.3803	1				33115	1912	21863	21873	37761	37761					0.0426199478615672
LPDNLKQLF	9	Unmodified	_LPDNLKQLF_					0	0	0		ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.3092041015625	2	544.310949	1086.60735	-0.33827	-0.00018412	1.3418	0.00073033	1.0035	0.00054621	544.3117119761495	69.028	0.86163	69.412	68.947	69.808	0.38416					59	20	4	0	0	0	0.33718	1	7635	7635		62.107	6.6032	1	610600			33116	7849	21864	21874	37762	37762					0.06750602511419856
LPDPKPPKP	9	Unmodified	_LPDPKPPKP_					0	0	0			REV__nc|ENSG00000204469|P48634-2|PRRC2A	REV__nc|ENSG00000204469|P48634-2|PRRC2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7947692871094	2	494.794935	987.575317	-1.3308	-0.00065846	1.2502	0.00061859	-0.080595	-3.9878E-05	494.7953589400389	59.726	1.0377	60.116	59.651	60.688	0.39077					51	26	3	0	0	0	0.12652	1	6307	6307		87.754	5.5138	1	698020	+		33117	23495	21865	21875	37763	37763					0.08103234828274708
LPDPLLVID	9	Unmodified	_LPDPLLVID_					0	0	0			REV__ENSG00000180264|ENST00000696331|ADGRD2;REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	REV__ENSG00000180264|ENST00000696331|ADGRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.7952880859375	2	497.794601	993.574648	-1.2593	-0.00062688	4.012	0.0019971	2.7527	0.0013703	497.79616758279207	48.708	1.9058	48.709	47.99	49.896	0.00017166					121	43	4	0	0	0	0.7932	1	4073	4073		24.203	1.1603	1	500820	+		33118	22385;30068	21866	21876	37764	37764					0.07760395388561392
LPDTLKVTY	9	Unmodified	_LPDTLKVTY_					0	0	0		ENSG00000160255|ENST00000652462|ITGB2;ENST00000498666.5_1_21:46313282-46313576:-|nuORF;ENST00000475170.5_1_21:46306285-46313576:-|nuORF	ENSG00000160255|ENST00000652462|ITGB2	ENSG00000160255|ENST00000652462|ITGB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.29736328125	2	525.297507	1048.58046	-0.55525	-0.00029167	0.062832	3.3005E-05	-0.49242	-0.00025866	525.2974801931415	57.625	2.1169	58.019	57.411	59.528	0.39407					148	51	5	0	0	0	2.0213E-05	9	5972	5961;5972;5984;5995;6007;6019;6031;6043;6059		154.12	52.518	1	17660000			33119	5573	21867	21877	37765;37766;37767;37768;37769;37770;37771;37772;37773	37766					0.058114939002507526
LPDTLKVTY	9	Unmodified	_LPDTLKVTY_					0	0	0		ENSG00000160255|ENST00000652462|ITGB2;ENST00000498666.5_1_21:46313282-46313576:-|nuORF;ENST00000475170.5_1_21:46306285-46313576:-|nuORF	ENSG00000160255|ENST00000652462|ITGB2	ENSG00000160255|ENST00000652462|ITGB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2974243164062	2	525.297507	1048.58046	0.66968	0.00035178	-1.076	-0.00056522	-0.40632	-0.00021344	525.2969012975282	57.504	1.9035	58.059	57.519	59.422	0.55512					127	46	5	0	0	0	2.4207E-08	8	5977	5967;5977;5988;6000;6012;6025;6037;6058		158.07	67.838	1	18581000			33120	5573	21867	21877	37774;37775;37776;37777;37778;37779;37780;37781	37775					0.058114939002507526
LPDVIIILLA	10	Unmodified	_LPDVIIILLA_					0	0	0			REV__ENSG00000167360|ENST00000300778|OR51Q1	REV__ENSG00000167360|ENST00000300778|OR51Q1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.3588256835938	2	540.357368	1078.70018	-0.068166	-3.6834E-05	2.3888	0.0012908	2.3206	0.001254	540.3584971364328	36.917	1.6881	36.864	36.337	38.025	-0.053558					103	37	4	0	0	0	0.85438	2	2471	2471;2509		16.473	4.9621	1	646150	+		33121	21381	21868	21878	37782;37783	37782					0.1639810724484505
LPDVIIILLA	10	Unmodified	_LPDVIIILLA_					0	0	0			REV__ENSG00000167360|ENST00000300778|OR51Q1	REV__ENSG00000167360|ENST00000300778|OR51Q1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.35791015625	2	540.357368	1078.70018	-0.017297	-9.3466E-06	2.5708	0.0013891	2.5535	0.0013798	540.3585627881598	36.881	1.2861	36.905	36.409	37.695	0.023624					76	34	3	0	0	0	0.88541	1	2110	2110		11.511	0	1	515190	+		33122	21381	21868	21878	37784	37784					0.1639810724484505
LPDVLKKV	8	Unmodified	_LPDVLKKV_					0	0	0		ENSG00000068650|ENST00000375645|ATP11A;ENST00000495930.1_1_13:113527892-113530303:+|nuORF	ENSG00000068650|ENST00000375645|ATP11A	ENSG00000068650|ENST00000375645|ATP11A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7919616699219	2	456.299853	910.585153	0.29858	0.00013624	2.5342	0.0011564	2.8328	0.0012926	456.3008516617644	49.246	1.4512	49.283	48.879	50.33	0.037731					70	34	3	0	0	0	0.4196	1	3885	3885		11.511	0	1	154250			33123	1202	21869	21879	37785	37785					0.1262842283366581
LPEAAREV	8	Unmodified	_LPEAAREV_					0	0	0		ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.74462890625	2	442.745442	883.476331	0.39735	0.00017592	-1.8334	-0.00081175	-1.4361	-0.00063583	442.74450802650625	89.278	0.7365	89.729	89.448	90.184	0.45058					60	17	4	0	0	0	0.86677	1	10592	10592		27.882	1.0861	1	3535200			33124	1054	21870	21880	37786	37786					0.029932118633723803
LPEIIPILE	9	Unmodified	_LPEIIPILE_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8200073242188	2	518.818076	1035.6216	0.48903	0.00025372	3.8254	0.0019847	4.3144	0.0022384	518.8198813500153	53.188	1.5362	53.602	53.044	54.58	0.4139					90	36	4	0	0	0	0.5393	1	5327	5327		50.025	2.1089	1	3852900			33125	1611	21871	21881	37787	37787					0.10521254939703795
LPEIIPILE	9	Unmodified	_LPEIIPILE_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8203735351562	2	518.818076	1035.6216	-0.16117	-8.3619E-05	4.3824	0.0022736	4.2212	0.00219	518.8201883857264	52.919	1.3295	53.533	52.991	54.321	0.61436					72	31	3	0	0	0	0.5393	1	5317	5317		50.025	2.1089	1	3507900			33126	1611	21871	21881	37788	37788					0.10521254939703795
LPEIIPILE	9	Unmodified	_LPEIIPILE_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	518.818076	1035.6216	-0.2748	-0.00014257	4.7772	0.0024785	4.5024	0.0023359	518.820378724003	53.915	0.5649	53.89	53.645	54.21	-0.024754	0.11322	0.00063667	NaN	50.025	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76252			33127	1611	21871	21881							0.10521254939703795
LPEIIPILE	9	Unmodified	_LPEIIPILE_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	518.818076	1035.6216	0.030405	1.5775E-05	4.1425	0.0021492	4.1729	0.002165	518.820187384294	54.003	0.52252	54.026	53.745	54.267	0.022541	0.24899	-2.1926E-05	NaN	50.025	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75831			33128	1611	21871	21881							0.10521254939703795
LPEIIPILE	9	Unmodified	_LPEIIPILE_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	518.818076	1035.6216	-0.30576	-0.00015863	3.9497	0.0020492	3.6439	0.0018905	518.8200163186531	53.758	0.54843	53.806	53.552	54.101	0.047806	0.028897	-0.000222	NaN	50.025	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82995			33129	1611	21871	21881							0.10521254939703795
LPEIIPILE	9	Unmodified	_LPEIIPILE_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	518.818076	1035.6216	0.39716	0.00020605	3.7958	0.0019693	4.1929	0.0021754	518.8199746621572	53.754	0.60049	53.836	53.569	54.17	0.081524	0.059009	-0.00038172	NaN	50.025	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	155250			33130	1611	21871	21881							0.10521254939703795
LPEIIPILE	9	Unmodified	_LPEIIPILE_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	518.818076	1035.6216	-0.33725	-0.00017497	4.5254	0.0023478	4.1881	0.0021729	519.3217479580497	53.807	0.65749	53.745	53.399	54.057	-0.062061	-0.03171	0.00037534	NaN	50.025	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98921			33131	1611	21871	21881							0.10521254939703795
LPEKKKMKYI	10	Unmodified	_LPEKKKMKYI_					0	0	0		nc|ENSG00000108312|P17480-2|UBTF;ENSG00000108312|ENST00000436088|UBTF	nc|ENSG00000108312|P17480-2|UBTF	nc|ENSG00000108312|P17480-2|UBTF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.59454345703125	3	426.593181	1276.75771	-0.47921	-0.00020443	3.5104	0.0014975	3.0312	0.0012931	426.5946424263707	33.571	1.0016	33.514	33.214	34.216	-0.056385					58	22	4	0	0	0	0.46422	1	2049	2049		53.089	0	1	557890			33132	2398	21872	21882	37789	37789					0.13040626178735693
LPESGQSEP	9	Unmodified	_LPESGQSEP_					0	0	0		ENST00000487682.5_1_1:156905794-156908468:-|nuORF;nc|ENSG00000132694|O15085|ARHGEF11;ENSG00000132694|ENST00000368194|ARHGEF11	ENST00000487682.5_1_1:156905794-156908468:-|nuORF	ENST00000487682.5_1_1:156905794-156908468:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2218933105469	2	472.221997	942.429441	0.048074	2.2702E-05	0.43805	0.00020686	0.48613	0.00022956	472.2221629933996	38.668	0.64296	38.615	38.293	38.936	-0.052727					33	19	2	0	0	0	0.62081	1	2300	2300		45.952	10.334	1	163440			33133	3821	21873	21883	37790	37790					-0.044076924784235416
LPESTHVEF	9	Unmodified	_LPESTHVEF_					0	0	0		nc|ENSG00000166750|Q08AF3-2|SLFN5;ENSG00000166750|ENST00000299977|SLFN5	nc|ENSG00000166750|Q08AF3-2|SLFN5	nc|ENSG00000166750|Q08AF3-2|SLFN5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.760498046875	2	529.761289	1057.50803	0.9068	0.00048039	-1.2067	-0.00063928	-0.29994	-0.0001589	529.7606150271984	50.433	0.78274	50.88	50.473	51.256	0.44761					48	18	4	0	0	0	0.080198	3	4968	4956;4968;4983		97.473	28.686	1	1420000			33134	6227	21874	21884	37791;37792;37793	37792					-0.018428401733444844
LPESTHVEF	9	Unmodified	_LPESTHVEF_					0	0	0		nc|ENSG00000166750|Q08AF3-2|SLFN5;ENSG00000166750|ENST00000299977|SLFN5	nc|ENSG00000166750|Q08AF3-2|SLFN5	nc|ENSG00000166750|Q08AF3-2|SLFN5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7608642578125	2	529.761289	1057.50803	0.93501	0.00049533	-0.92554	-0.00049032	0.009466	5.0147E-06	529.7606188268135	50.239	0.65113	51.084	50.809	51.46	0.84501					39	15	3	0	0	0	0.09311	3	4967	4943;4954;4967		94.006	29.799	1	1651800			33135	6227	21874	21884	37794;37795;37796	37796					-0.018428401733444844
LPETPRLFPLL	11	Unmodified	_LPETPRLFPLL_					0	0	0		nc|ENSG00000075826|Q9NQW1-5|SEC31B;ENSG00000075826|ENST00000370345|SEC31B;ENST00000492667.5_1_10:102249405-102250104:-|nuORF	nc|ENSG00000075826|Q9NQW1-5|SEC31B	nc|ENSG00000075826|Q9NQW1-5|SEC31B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.59759521484375	3	432.595579	1294.76491	2.718	0.0011758	2.0126	0.00087062	4.7305	0.0020464	432.59643721162763	106.42	1.1232	106.39	105.97	107.1	-0.036613					90	25	5	0	0	0	0.74022	1	11736	11736		24.232	0	1	14662000			33136	1344	21875	21885	37797	37797					0.12931682050793825
LPEVAVYERLT	11	Unmodified	_LPEVAVYERLT_					0	0	0			REV__nc|ENSG00000129219|O14939-4|PLD2	REV__nc|ENSG00000129219|O14939-4|PLD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	645.340087890625	2	645.358628	1288.7027	0.63466	0.00040959	-0.56288	-0.00036326	0.07178	4.6324E-05	645.3577252714656	66.419	0.068314	66.545	66.502	66.57	0.1265					4	2	2	0	0	0	0.17643	1	5897	5897		14.137	0	1	68515	+		33137	18812	21876	21886	37798	37798					0.06989910911806874
LPEVPLLVD	9	Unmodified	_LPEVPLLVD_					0	0	0		nc|ENSG00000176390|Q8IUI8-2|CRLF3;ENSG00000176390|ENST00000324238|CRLF3	nc|ENSG00000176390|Q8IUI8-2|CRLF3	nc|ENSG00000176390|Q8IUI8-2|CRLF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.7950439453125	2	497.794601	993.574648	-0.21329	-0.00010617	2.8776	0.0014325	2.6644	0.0013263	497.7957318764316	48.396	0.83173	48.303	47.807	48.639	-0.093178					51	20	3	0	0	0	0.7932	1	3697	3697		24.203	3.7209	1	388480			33138	7075	21877	21887	37799	37799					0.0776039538857276
LPEVVKSQRPL	11	Unmodified	_LPEVVKSQRPL_					0	0	0		ENSG00000162745|ENST00000294794|OLFML2B	ENSG00000162745|ENST00000294794|OLFML2B	ENSG00000162745|ENST00000294794|OLFML2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5924377441406	3	422.590717	1264.75032	2.1003	0.00088759	2.5397	0.0010733	4.6401	0.0019609	422.59169327867005	49.208	2.7795	49.208	47.99	50.769	0.00016785					227	65	5	0	0	0	0.77511	1	4097	4097		16.53	0.6092	1	2361900			33139	5730	21878	21888	37800	37800					0.12853609902663266
LPFDQGCTNI	10	Unmodified	_LPFDQGCTNI_					0	0	0			REV__ENST00000459872.1_1_6:10557103-10619499:+|nuORF	REV__ENST00000459872.1_1_6:10557103-10619499:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2582397460938	2	554.260599	1106.50665	-0.78651	-0.00043593	-2.3164	-0.0012839	-3.103	-0.0017198	554.259215206248	71.15	2.4532	71.535	70.999	73.453	0.38449					129	58	4	0	0	0	0.14384	2	7897	7897;7920		95.815	8.7828	1	2148900	+		33140	17900	21879	21889	37801;37802	37801					-0.04234797533740675
LPFFCKTNL	9	Unmodified	_LPFFCKTNL_					0	0	0		nc|ENSG00000121446|A5PLK6-6|RGSL1;ENSG00000121446|ENST00000294854|RGSL1	nc|ENSG00000121446|A5PLK6-6|RGSL1	nc|ENSG00000121446|A5PLK6-6|RGSL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.8375244140625	2	541.788795	1081.56304	0.037716	2.0434E-05	-3.5695	-0.0019339	-3.5318	-0.0019135	541.7867744058905	35.797	0.41413	36.045	35.82	36.234	0.24769					15	10	2	0	0	0	0.20789	1	2787	2787		73.975	2.679	1	113910			33141	3184	21880	21890	37803	37803					0.025518750935589196
LPFGKVTNL	9	Unmodified	_LPFGKVTNL_					0	0	0		nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;ENSG00000119314|ENST00000374257|PTBP3;ENST00000586944.5_1_19:797434-805231:+|nuORF;ENST00000590887.5_1_19:797434-804304:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;ENSG00000011304|ENST00000356948|PTBP1	nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000011304|P26599-1|PTBP1	nc|ENSG00000011304|P26599-1|PTBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.79583740234375	2	494.794935	987.575317	-1.3308	-0.00065846	1.2502	0.00061859	-0.080595	-3.9878E-05	494.7953589400389	59.726	1.0377	60.116	59.651	60.688	0.39077					51	26	3	0	0	0	0.15959	1	6290	6290		82.241	0	1	698020			33142	14869;787	21881	21891	37804	37804					0.08103234828263339
LPFGKVTNL	9	Unmodified	_LPFGKVTNL_					0	0	0		nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;ENSG00000119314|ENST00000374257|PTBP3;ENST00000586944.5_1_19:797434-805231:+|nuORF;ENST00000590887.5_1_19:797434-804304:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;ENSG00000011304|ENST00000356948|PTBP1	nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000011304|P26599-1|PTBP1	nc|ENSG00000011304|P26599-1|PTBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.79510498046875	2	494.794935	987.575317	-0.71818	-0.00035535	0.5403	0.00026734	-0.17788	-8.8012E-05	494.794924428077	59.527	1.1168	60.08	59.775	60.891	0.55323					46	29	3	0	0	0	0.36616	1	6312	6312		60.118	0	1	901690			33143	14869;787	21881	21891	37805	37805					0.08103234828263339
LPFKRGAPP	9	Unmodified	_LPFKRGAPP_					0	0	0			REV__ENST00000291232.4_2_22:42318247-42318586:-|nuORF	REV__ENST00000291232.4_2_22:42318247-42318586:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7981872558594	2	491.795269	981.575986	-1.4502	-0.0007132	2.5925	0.001275	1.1423	0.00056177	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.77546	1	4667	4667		31.955	6.5047	1	1043600	+		33144	24666	21882	21892	37806	37806					0.08446074267988024
LPFKRGAPP	9	Unmodified	_LPFKRGAPP_					0	0	0			REV__ENST00000291232.4_2_22:42318247-42318586:-|nuORF	REV__ENST00000291232.4_2_22:42318247-42318586:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7952575683594	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.7932	1	4892	4892		26.796	1.3459	1	792830	+		33145	24666	21882	21892	37807	37807					0.08446074267988024
LPFLPSTEDVY	11	Unmodified	_LPFLPSTEDVY_					0	0	0		ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.8238525390625	2	640.824086	1279.63362	1.1324	0.00072567	-1.3056	-0.00083663	-0.17315	-0.00011096	640.8231653406368	90.386	1.814	90.837	90.412	92.226	0.45058					147	43	6	0	0	0	1.4483E-08	8	10691	10667;10679;10691;10703;10715;10729;10742;10755		148.04	81.614	1	25148000			33146	8429	21883	21893	37808;37809;37810;37811;37812;37813;37814;37815	37810					0.0049882689224887145
LPFLPSTEDVY	11	Unmodified	_LPFLPSTEDVY_					0	0	0		ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.823974609375	2	640.824086	1279.63362	0.070276	4.5035E-05	-0.024093	-1.5439E-05	0.046184	2.9596E-05	640.8240227864138	90.462	2.2246	90.933	90.485	92.71	0.47068					171	53	6	0	0	0	9.1028E-14	9	10738	10702;10714;10725;10738;10750;10762;10774;10786;10799		161.9	77.427	1	24762000			33147	8429	21883	21893	37816;37817;37818;37819;37820;37821;37822;37823;37824	37819					0.0049882689224887145
LPFLRCPLY	9	Unmodified	_LPFLRCPLY_					0	0	0			REV__ENST00000337929.7_1_16:27413632-27413773:+|nuORF	REV__ENST00000337929.7_1_16:27413632-27413773:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3019409179688	2	561.312438	1120.61032	0.39133	0.00021966	-3.7531	-0.0021066	-3.3617	-0.001887	561.3093913762153	55.356	2.8595	55.925	53.691	56.55	0.56836					96	69	3	0	0	0	0.18036	2	5671	5659;5671		77.944	25.645	1	1532900	+		33148	25209	21884	21894	37825;37826	37826					0.05484154364580718
LPFPDETHERY	11	Unmodified	_LPFPDETHERY_					0	0	0		ENST00000532758.5_1_8:145137633-145138586:+|nuORF;ENSG00000197858|ENST00000355091|GPAA1;ENST00000525308.1_1_8:145138262-145138586:+|nuORF;ENST00000527144.5_1_8:145138126-145139470:+|nuORF;nc|ENSG00000197858|O43292-2|GPAA1	ENST00000532758.5_1_8:145137633-145138586:+|nuORF	ENST00000532758.5_1_8:145137633-145138586:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.55743408203125	3	468.557853	1402.65173	-0.34025	-0.00015943	0.15365	7.1994E-05	-0.1866	-8.7434E-05	468.55780041164985	49.531	0.69618	49.991	49.623	50.32	0.45983					51	16	4	0	0	0	0.20899	4	4825	4815;4825;4837;4850		79.07	29.604	1	2671600			33149	8206	21885	21895	37827;37828;37829;37830	37828					-0.03349038133023896
LPFPDETHERY	11	Unmodified	_LPFPDETHERY_					0	0	0		ENST00000532758.5_1_8:145137633-145138586:+|nuORF;ENSG00000197858|ENST00000355091|GPAA1;ENST00000525308.1_1_8:145138262-145138586:+|nuORF;ENST00000527144.5_1_8:145138126-145139470:+|nuORF;nc|ENSG00000197858|O43292-2|GPAA1	ENST00000532758.5_1_8:145137633-145138586:+|nuORF	ENST00000532758.5_1_8:145137633-145138586:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.5578918457031	3	468.557853	1402.65173	0.072294	3.3874E-05	-0.32834	-0.00015385	-0.25605	-0.00011997	468.55754908510335	49.329	0.81334	50.174	49.869	50.683	0.84501					54	19	4	0	0	0	0.12156	4	4816	4805;4816;4827;4840		88.134	37.498	1	2907200			33150	8206	21885	21895	37831;37832;37833;37834	37832					-0.03349038133023896
LPFQPRYR	8	Unmodified	_LPFQPRYR_					0	0	0		ENST00000326199.12_1_6:34392994-34393855:-|nuORF	ENST00000326199.12_1_6:34392994-34393855:-|nuORF	ENST00000326199.12_1_6:34392994-34393855:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8065795898438	2	538.803626	1075.5927	2.2674	0.0012217	3.4223	0.001844	5.6897	0.0030656	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.84341	1	9536	9536		24.203	1.1603	1	835060			33151	10076	21886	21896	37835	37835					0.057925751539414705
LPFRVAPAS	9	Unmodified	_LPFRVAPAS_					0	0	0		ENST00000600252.5_1_19:15219832-15221230:+|nuORF	ENST00000600252.5_1_19:15219832-15221230:+|nuORF	ENST00000600252.5_1_19:15219832-15221230:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2776794433594	2	479.279452	956.544351	-0.95082	-0.00045571	-3.0433	-0.0014586	-3.9941	-0.0019143	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.74721	1	10099	10099		37.159	1.5408	1	6350300			33152	14380	21887	21897	37836	37836					0.06434081514032641
LPFSLSPLN	9	Unmodified	_LPFSLSPLN_					0	0	0			REV__ENST00000584557.1_1_17:73701645-73701774:+|nuORF	REV__ENST00000584557.1_1_17:73701645-73701774:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.2784729003906	2	494.279118	986.543683	-0.34953	-0.00017277	0.95373	0.00047141	0.6042	0.00029864	494.2792609311292	58.853	0.68588	59.406	59.047	59.733	0.55323					39	16	3	0	0	0	0.38563	1	6198	6198		58.782	3.2778	1	342820	+		33153	29082	21888	21898	37837	37837					0.0498724207432133
LPFSLSPLN	9	Unmodified	_LPFSLSPLN_					0	0	0			REV__ENST00000584557.1_1_17:73701645-73701774:+|nuORF	REV__ENST00000584557.1_1_17:73701645-73701774:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	494.279118	986.543683	-1.3942	-0.00068914	1.4519	0.00071767	0.057703	2.8522E-05	494.2796365544167	58.952	0.6695	59.344	58.983	59.652	0.39209	-0.030882	0.00024738	NaN	58.782	38	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	285470	+		33154	29082	21888	21898							0.0498724207432133
LPFSLSPLN	9	Unmodified	_LPFSLSPLN_					0	0	0			REV__ENST00000584557.1_1_17:73701645-73701774:+|nuORF	REV__ENST00000584557.1_1_17:73701645-73701774:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	494.279118	986.543683	-0.34953	-0.00017277	0.95373	0.00047141	0.6042	0.00029864	494.2792609311292	58.853	0.68588	59.406	59.047	59.733	0.55323	0.030882	-0.00024513	NaN	58.782	39	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	342820	+		33155	29082	21888	21898							0.0498724207432133
LPFTPGPGAM	10	Unmodified	_LPFTPGPGAM_					0	0	0			REV__ENST00000308440.10_1_11:67056880-67057314:+|nuORF	REV__ENST00000308440.10_1_11:67056880-67057314:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.30084228515625	2	494.252046	986.489538	-0.82729	-0.00040889	-2.8388	-0.0014031	-3.6661	-0.001812	494.2502681287773	97.7	0.25315	97.7	97.552	97.806	0					8	5	2	0	0	0	0.37624	1	9796	9796		31.955	5.1588	1	113360	+		33156	21865	21889	21899	37838	37838					-0.004246733488798782
LPGAPGPAGA	10	Unmodified	_LPGAPGPAGA_					0	0	0			REV__chr2:189066433-189079080|50|11.52|0.18|5.98|-|ENST00000618828|COL5A2,COL5A2	REV__chr2:189066433-189079080|50|11.52|0.18|5.98|-|ENST00000618828|COL5A2,COL5A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.91064453125	2	404.221603	806.428653	1.6717	0.00067573	-3.3966	-0.001373	-1.7249	-0.00069726	404.2202616578893	68.254	0.58804	68.639	68.402	68.99	0.38482					20	13	2	0	0	0	0.37624	1	7512	7512		12.959	1.4482	1	68446	+		33157	15743	21890	21900	37839	37839					0.01769557663192245
LPGATFPSY	9	Unmodified	_LPGATFPSY_					0	0	0		ENST00000462787.5_1_3:160117668-160117773:+|nuORF	ENST00000462787.5_1_3:160117668-160117773:+|nuORF	ENST00000462787.5_1_3:160117668-160117773:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.74267578125	2	476.742368	951.470183	-0.99369	-0.00047373	1.7555	0.00083692	0.76181	0.00036319	476.74302300808216	78.629	0.84048	78.681	78.157	78.998	0.051674					33	22	2	0	0	0	0.77546	1	7758	7758		31.955	0	1	129950			33158	12051	21891	21901	37840	37840					-0.007493063681408785
LPGDVLALL	9	Unmodified	_LPGDVLALL_					0	0	0		ENSG00000166823|ENST00000300057|MESP1	ENSG00000166823|ENST00000300057|MESP1	ENSG00000166823|ENST00000300057|MESP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.7841796875	2	455.784036	909.553519	-1.0545	-0.00048064	2.2076	0.0010062	1.1531	0.00052555	455.7848539070358	43.817	2.171	43.784	42.93	45.101	-0.033474					74	50	2	0	0	0	0.7932	1	3450	3450		26.796	1.3459	1	266510			33159	6233	21892	21902	37841	37841					0.09512430079701062
LPGDVLALL	9	Unmodified	_LPGDVLALL_					0	0	0		ENSG00000166823|ENST00000300057|MESP1	ENSG00000166823|ENST00000300057|MESP1	ENSG00000166823|ENST00000300057|MESP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3013916015625	2	455.784036	909.553519	-0.51726	-0.00023576	-1.516	-0.00069097	-2.0333	-0.00092672	455.78541628671684	34.413	0.90813	34.416	34.104	35.012	0.0026016					22	21	2	0	0	0	0.20789	1	2123	2123		52.299	7.7681	1	13943			33160	6233	21892	21902	37842	37842					0.09512430079701062
LPGFVTRAP	9	Unmodified	_LPGFVTRAP_					0	0	0			REV__chr15:26940077-26943457|20|23.7|0.2|6.92|+|2|GABRA5,None|1	REV__chr15:26940077-26943457|20|23.7|0.2|6.92|+|2|GABRA5,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2777404785156	2	479.279452	956.544351	-0.72512	-0.00034753	-3.4808	-0.0016683	-4.2059	-0.0020158	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.71772	1	9517	9517		39.253	1.4413	1	1822400	+		33161	15613	21893	21903	37843	37843					0.0643408151404401
LPGGRRRRSPG	11	Unmodified	_LPGGRRRRSPG_					0	0	0		ENSG00000135956|ENST00000258439|TMEM127	ENSG00000135956|ENST00000258439|TMEM127	ENSG00000135956|ENST00000258439|TMEM127	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8588256835938	2	604.857786	1207.70102	0.044967	2.7199E-05	1.3253	0.00080163	1.3703	0.00082883	604.8584867584212	80.792	1.0733	81.319	80.907	81.98	0.52676					69	21	4	0	0	0	0.70584	1	9304	9304		9.7057	0	1	4362400			33162	4074	21894	21904	37844	37844					0.10547759457085704
LPGHQRIH	8	Unmodified	_LPGHQRIH_					0	0	0		nc|ENSG00000145908|Q96RE9-4|ZNF300;ENSG00000145908|ENST00000274599|ZNF300;nc|ENSG00000145908|Q96RE9-2|ZNF300;nc|ENSG00000145908|Q96RE9-3|ZNF300	nc|ENSG00000145908|Q96RE9-4|ZNF300	nc|ENSG00000145908|Q96RE9-4|ZNF300	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2737121582031	2	479.272493	956.530432	0.41724	0.00019997	0.49768	0.00023852	0.91492	0.0004385	479.2725825967004	97.562	0.98976	97.953	97.682	98.672	0.39065					61	23	5	0	0	0	0.89567	2	11763	11763;11786		57.453	8.2419	1	1576600			33163	4803	21895	21905	37845;37846	37845					0.05042848805612721
LPGIQLSR	8	Unmodified	_LPGIQLSR_					0	0	0		ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2715148925781	2	442.271627	882.528701	-0.83468	-0.00036915	-0.31464	-0.00013916	-1.1493	-0.00050831	442.2714568018733	84.382	2.5266	84.818	83.748	86.275	0.43538					144	61	4	0	0	0	0.89494	1	9868	9868		37.159	0	1	3031500			33164	10765	21896	21906	37847	37847					0.08273794996989636
LPGKSLGHA	9	Unmodified	_LPGKSLGHA_					0	0	0			REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.25543212890625	2	440.255977	878.497401	0.14193	6.2485E-05	-1.4822	-0.00065253	-1.3402	-0.00059005	440.25513727144596	71.719	1.1559	72.269	71.825	72.981	0.55009					55	27	3	0	0	0	0.76255	1	8057	8057		35.618	5.7767	1	507320	+		33165	17719	21897	21907	37848	37848					0.05329221962904285
LPGKSLGHA	9	Unmodified	_LPGKSLGHA_					0	0	0			REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	440.255977	878.497401	-1.1996	-0.00052811	-0.19109	-8.4128E-05	-1.3907	-0.00061224	440.25582777283796	71.837	1.2052	72.222	71.752	72.957	0.38449	-0.023453	0.00057714	NaN	35.618	55	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	420360	+		33166	17719	21897	21907							0.05329221962904285
LPGKSLGHA	9	Unmodified	_LPGKSLGHA_					0	0	0			REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	440.255977	878.497401	0.14193	6.2485E-05	-1.4822	-0.00065253	-1.3402	-0.00059005	440.25513727144596	71.719	1.1559	72.269	71.825	72.981	0.55009	0.023453	-0.00055966	NaN	35.618	55	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	507320	+		33167	17719	21897	21907							0.05329221962904285
LPGLCLCLQE	10	Unmodified	_LPGLCLCLQE_					0	0	0		ENST00000569558.5_1_16:90103573-90109750:+|nuORF	ENST00000569558.5_1_16:90103573-90109750:+|nuORF	ENST00000569558.5_1_16:90103573-90109750:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.2750854492188	2	544.77757	1087.54059	0.811	0.00044181	-3.8865	-0.0021173	-3.0755	-0.0016755	544.7754210003355	29.93	0.48954	29.915	29.709	30.198	-0.015167					16	10	2	0	0	0	0.86763	1	1557	1557		26.693	1.1189	1	37042			33168	13982	21898	21908	37849	37849					0.0003190763366092142
LPGLSEDLSGT	11	Unmodified	_LPGLSEDLSGT_					0	0	0			REV__ENSG00000228672|ENST00000434752|PROB1	REV__ENSG00000228672|ENST00000434752|PROB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.7781982421875	2	544.777136	1087.53972	4.4104	0.0024027	-1.5473	-0.00084294	2.8631	0.0015597	544.7763678284301	107.48	0.49608	107.59	107.29	107.79	0.11715					29	22	2	0	0	0	0.6921	1	13148	13148		32.812	2.2436	1	107690	+		33169	23751	21899	21909	37850	37850					-0.0005489221002790146
LPGLTLGVL	9	Unmodified	_LPGLTLGVL_					0	0	0			REV__ENST00000370220.1_1_10:102759899-102760451:+|nuORF	REV__ENST00000370220.1_1_10:102759899-102760451:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7852478027344	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.7932	1	2932	2932		13.775	3.5906	1	15753000	+		33170	25645	21900	21910	37851	37851					0.11308733942325944
LPGRRETPAVL	11	Unmodified	_LPGRRETPAVL_					0	0	0		ENST00000482173.5_1_7:150929672-150929786:+|nuORF	ENST00000482173.5_1_7:150929672-150929786:+|nuORF	ENST00000482173.5_1_7:150929672-150929786:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5748291015625	3	403.575178	1207.70371	0.56211	0.00022685	-1.4705	-0.00059345	-0.90837	-0.00036659	403.57452270455985	81.745	1.4637	81.891	80.868	82.331	0.14551					81	33	4	0	0	0	0.67762	1	7847	7847		35.178	3.544	1	2051300			33171	12482	21901	21911	37852	37852					0.10816170071370834
LPGRRGPPG	9	Unmodified	_LPGRRGPPG_					0	0	0		ENSG00000171812|ENST00000397799|COL8A2	ENSG00000171812|ENST00000397799|COL8A2	ENSG00000171812|ENST00000397799|COL8A2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.76531982421875	2	453.767043	905.519533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.367	1	42.329	41.829	42.829	-0.038223								0	0	0	0.31472	1	3251	3251		25.45	2.4077	1				33172	6714	21902	21912	37853	37853					0.0629944643133058
LPGRRGPPG	9	Unmodified	_LPGRRGPPG_					0	0	0		ENSG00000171812|ENST00000397799|COL8A2	ENSG00000171812|ENST00000397799|COL8A2	ENSG00000171812|ENST00000397799|COL8A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.7644348144531	2	453.767043	905.519533	-0.13114	-5.9507E-05	-2.4763	-0.0011237	-2.6075	-0.0011832	453.7659298914551	41.976	1.7233	41.931	41.177	42.9	-0.045471					104	47	4	0	0	0	0.77546	1	2736	2736		31.955	1.4512	1	768160			33173	6714	21902	21912	37854	37854					0.0629944643133058
LPGSHLLLNN	10	Unmodified	_LPGSHLLLNN_					0	0	0		ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF;ENST00000534922.5_1_12:133202008-133209092:-|nuORF	ENSG00000177084|ENST00000320574|POLE	ENSG00000177084|ENST00000320574|POLE	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	539.596923828125	2	539.306198	1076.59784	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.788	1	76.788	76.288	77.288	0								0	0	0	0.45132	1	7006	7006		31.53	2.3598	1				33174	7117	21903	21913	37855	37855					0.06260834225895451
LPGSSASVP	9	Unmodified	_LPGSSASVP_					0	0	0		ENSG00000173673|ENST00000377898|HES3	ENSG00000173673|ENST00000377898|HES3	ENSG00000173673|ENST00000377898|HES3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.72088623046875	2	407.718893	813.423233	2.692	0.0010976	1.3451	0.00054843	4.0371	0.001646	407.71961983038284	102.12	1.3069	102.42	101.63	102.94	0.29865					72	31	4	0	0	0	0.77546	1	12432	12432		31.955	0	1	5871700			33175	6879	21904	21914	37856	37856					0.009058340807200693
LPGTPITYY	9	Unmodified	_LPGTPITYY_					0	0	0		nc|ENSG00000138079|Q07837-2|SLC3A1;nc|ENSG00000138079|Q07837-5|SLC3A1;nc|ENSG00000138079|Q07837-7|SLC3A1;nc|ENSG00000138079|Q07837-6|SLC3A1;ENSG00000138079|ENST00000260649|SLC3A1;nc|ENSG00000138079|Q07837-4|SLC3A1	nc|ENSG00000138079|Q07837-2|SLC3A1	nc|ENSG00000138079|Q07837-2|SLC3A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.7696533203125	2	512.771126	1023.5277	0.19158	9.8235E-05	-4.2359	-0.002172	-4.0443	-0.0020738	512.7688486938052	38.33	0.59456	38.273	38.038	38.632	-0.057915					40	17	3	0	0	0	0.67235	1	2282	2282		42.474	1.9018	1	384660			33176	4266	21905	21915	37857	37857					0.016875358374250027
LPGTRLALLAS	11	Unmodified	_LPGTRLALLAS_					0	0	0		nc|ENSG00000166006|Q96PR1-4|KCNC2;nc|ENSG00000166006|Q96PR1-5|KCNC2;nc|ENSG00000166006|Q96PR1-3|KCNC2;nc|ENSG00000166006|Q96PR1-6|KCNC2;nc|ENSG00000166006|Q96PR1-2|KCNC2;ENSG00000166006|ENST00000549446|KCNC2	nc|ENSG00000166006|Q96PR1-4|KCNC2	nc|ENSG00000166006|Q96PR1-4|KCNC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.3458862304688	2	556.345323	1110.67609	0.66359	0.00036919	-0.58219	-0.0003239	0.081399	4.5286E-05	556.344844491865	17.817	0.61456	17.335	16.991	17.606	-0.48256					33	13	4	0	0	0	0.69995	1	324	324		31.53	0	1	319290			33177	6148	21906	21916	37858	37858					0.12518266811116519
LPGVTPAAS	9	Unmodified	_LPGVTPAAS_					0	0	0			REV__nc|ENSG00000111305|Q2KHT4-5|GSG1	REV__nc|ENSG00000111305|Q2KHT4-5|GSG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7290344238281	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.7932	1	7546	7546		23.042	0	1	159770	+		33178	17862	21907	21917	37859	37859					0.030704244603612096
LPGWPLKH	8	Unmodified	_LPGWPLKH_					0	0	0			REV__ENSG00000215910|ENST00000688073|C1orf167	REV__ENSG00000215910|ENST00000688073|C1orf167	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	474.27777099609375	2	474.276712	946.538872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.016	1	33.016	32.516	33.516	0								0	0	0	0.29498	1	1673	1673		26.796	0	1		+		33179	23694	21908	21918	37860	37860					0.06346402722238054
LPHAGLGAHG	10	Unmodified	_LPHAGLGAHG_					0	0	0			REV__nc|ENSG00000204852|Q2MV58-6|TCTN1	REV__nc|ENSG00000204852|Q2MV58-6|TCTN1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.2664489746094	2	465.251226	928.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.573	1	50.623	50.123	51.123	0.049896								0	0	0	0.45132	1	3984	3984		26.796	3.7536	1		+		33180	30164	21909	21919	37861	37861					0.02079453677379206
LPHFPATP	8	Unmodified	_LPHFPATP_					0	0	0		ENST00000569796.1_1_16:2278422-2280215:+|nuORF	ENST00000569796.1_1_16:2278422-2280215:+|nuORF	ENST00000569796.1_1_16:2278422-2280215:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.25250244140625	2	440.239796	878.465038	0.76708	0.0003377	0.6072	0.00026731	1.3743	0.00060501	440.23992531939473	90.502	0.85483	90.953	90.528	91.382	0.45058					28	20	2	0	0	0	0.4196	1	10747	10747		13.775	4.953	1	228550			33181	13985	21910	21920	37862	37862					0.020944345598991276
LPHGNSPVG	9	Unmodified	_LPHGNSPVG_					0	0	0			REV__nc|ENSG00000196767|P49335|POU3F4	REV__nc|ENSG00000196767|P49335|POU3F4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.23095703125	2	439.229959	876.445365	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.865	1	77.915	77.415	78.415	0.04969								0	0	0	0.29134	1	7636	7636		34.173	3.6689	1		+		33182	23170	21911	21921	37863	37863					0.002200585491550555
LPHKAMLQAE	10	Unmodified	_LPHKAMLQAE_					0	0	0			REV__ENSG00000185448|ENST00000346193|FAM47A	REV__ENSG00000185448|ENST00000346193|FAM47A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.3291015625	2	569.307884	1136.60121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.867	1	30.93	30.43	31.43	0.063122								0	0	0	0.45132	1	1380	1380		32.812	7.2384	1		+		33183	22766	21912	21922	37864	37864					0.038377610082534375
LPHLADLVSY	10	Unmodified	_LPHLADLVSY_					0	0	0		ENSG00000111424|ENST00000549336|VDR;ENST00000547065.1_1_12:48238531-48272768:-|nuORF;nc|ENSG00000111424|P11473-2|VDR	ENSG00000111424|ENST00000549336|VDR	ENSG00000111424|ENST00000549336|VDR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.3080444335938	2	564.308406	1126.60226	-0.011783	-6.6491E-06	0.28924	0.00016322	0.27746	0.00015657	564.3084317451929	74.641	0.65188	75.032	74.665	75.317	0.39111					44	15	4	0	0	0	0.43769	1	8425	8425		60.972	5.4677	1	1050900			33184	2581	21913	21923	37865	37865					0.04402298648801661
LPHLADLVSY	10	Unmodified	_LPHLADLVSY_					0	0	0		ENSG00000111424|ENST00000549336|VDR;ENST00000547065.1_1_12:48238531-48272768:-|nuORF;nc|ENSG00000111424|P11473-2|VDR	ENSG00000111424|ENST00000549336|VDR	ENSG00000111424|ENST00000549336|VDR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.3084716796875	2	564.308406	1126.60226	0.50228	0.00028344	-0.16806	-9.484E-05	0.33421	0.0001886	564.3081231418693	74.514	0.69415	75.073	74.63	75.324	0.55891					48	16	4	0	0	0	0.19278	2	8415	8415;8435		87.754	29.524	1	1259300			33185	2581	21913	21923	37866;37867	37866					0.04402298648801661
LPHMQFGY	8	Unmodified	_LPHMQFGY_					0	0	0			REV__ENSG00000135355|ENST00000369352|GJA10	REV__ENSG00000135355|ENST00000369352|GJA10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.7373046875	2	496.736563	991.458573	-0.073905	-3.6711E-05	2.4772	0.0012305	2.4033	0.0011938	496.7375659828047	59.559	0.70983	59.546	59.225	59.935	-0.013733					35	18	3	0	0	0	0.89457	1	5457	5457		37.028	0.58173	1	333290	+		33186	19212	21914	21924	37868	37868					-0.03749826663113254
LPHPGGSTNLK	11	Unmodified	_LPHPGGSTNLK_					0	0	0		nc|ENSG00000102572|Q9Y6E0|STK24	nc|ENSG00000102572|Q9Y6E0|STK24	nc|ENSG00000102572|Q9Y6E0|STK24	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8098754882812	2	560.809105	1119.60366	-0.087449	-4.9042E-05	0.26433	0.00014824	0.17688	9.9194E-05	560.8091081677871	31.44	0.77379	31.52	31.209	31.983	0.079836					46	17	4	0	0	0	0.36477	1	2153	2153		62.107	1.9892	1	979640			33187	14824	21915	21925	37869	37869					0.04863932737566756
LPHPPAAP	8	Unmodified	_LPHPPAAP_					0	0	0			REV__ENST00000342963.2_1_7:5459517-5460286:+|nuORF	REV__ENST00000342963.2_1_7:5459517-5460286:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2285461425781	2	400.226688	798.438824	-0.058285	-2.3327E-05	2.876	0.0011511	2.8177	0.0011277	400.2280059844884	52.237	1.9334	52.905	52.23	54.164	0.66729					76	46	3	0	0	0	0.84567	1	5212	5212		24.504	4.0222	1	9506900	+		33188	25280	21916	21926	37870	37870					0.031541653884119114
LPHQPLATY	9	Unmodified	_LPHQPLATY_					0	0	0		ENSG00000110777|ENST00000393067|POU2AF1	ENSG00000110777|ENST00000393067|POU2AF1	ENSG00000110777|ENST00000393067|POU2AF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.2810668945312	2	520.282192	1038.54983	-0.32956	-0.00017146	0.49442	0.00025724	0.16486	8.5774E-05	520.2822823742565	46.695	0.87479	47.167	46.775	47.65	0.4714					47	20	3	0	0	0	3.2505E-30	5	4421	4397;4399;4410;4421;4433		193.98	69.989	1	4833300			33189	2541	21917	21927	37871;37872;37873;37874;37875	37874					0.032097603058673485
LPHQPLATY	9	Unmodified	_LPHQPLATY_					0	0	0		ENSG00000110777|ENST00000393067|POU2AF1	ENSG00000110777|ENST00000393067|POU2AF1	ENSG00000110777|ENST00000393067|POU2AF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.2821044921875	2	520.282192	1038.54983	-0.83428	-0.00043406	1.0187	0.00053002	0.18444	9.5958E-05	520.2825735361362	46.514	0.80474	47.437	47.11	47.915	0.92315					43	18	3	0	0	0	8.9147E-29	4	4400	4379;4389;4400;4413		186.09	66.347	1	4378000			33190	2541	21917	21927	37876;37877;37878;37879	37878					0.032097603058673485
LPHRLLLA	8	Unmodified	_LPHRLLLA_					0	0	0			REV__ENSG00000188897|ENST00000696174|unknown	REV__ENSG00000188897|ENST00000696174|unknown	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.8066101074219	2	466.805637	931.596721	-0.25933	-0.00012106	1.8679	0.00087195	1.6086	0.00075089	466.80631326130225	31.324	1.1632	31.272	30.944	32.108	-0.051033					55	26	3	0	0	0	0.80963	1	1761	1761		15.636	0.97212	1	77668	+		33191	23042	21918	21928	37880	37880					0.1281866464767063
LPHRYGYIA	9	Unmodified	_LPHRYGYIA_					0	0	0			REV__ENSG00000108846|ENST00000285238|ABCC3	REV__ENSG00000108846|ENST00000285238|ABCC3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.7952880859375	2	545.295633	1088.57671	0.76347	0.00041632	-0.57086	-0.00031129	0.19261	0.00010503	545.2953454600055	17.247	0.12554	17.324	17.272	17.397	0.077148					6	4	2	0	0	0	0.20789	1	174	174		24.203	3.2558	1	17374	+		33192	17737	21919	21929	37881	37881					0.03596868917043139
LPIDGANDLF	10	Unmodified	_LPIDGANDLF_					0	0	0		ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-4|OGA;ENST00000492204.1_1_10:103552448-103553834:-|nuORF	ENSG00000198408|ENST00000361464|OGA	ENSG00000198408|ENST00000361464|OGA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.7759399414062	2	537.776939	1073.53933	-0.90899	-0.00048883	0.76436	0.00041106	-0.14462	-7.7776E-05	537.7772938093055	85.659	0.86588	86.106	85.782	86.648	0.44736					59	20	4	0	0	0	0.67571	1	10070	10070		45.972	1.8554	1	824940			33193	8270	21920	21930	37882	37882					0.005497328607361851
LPIDPNEPTY	10	Unmodified	_LPIDPNEPTY_					0	0	0		nc|ENSG00000153487|Q9UK53|ING1;nc|ENSG00000153487|Q9UK53-3|ING1;nc|ENSG00000153487|Q9UK53-4|ING1;nc|ENSG00000153487|Q9UK53-5|ING1;ENSG00000153487|ENST00000333219|ING1	nc|ENSG00000153487|Q9UK53|ING1	nc|ENSG00000153487|Q9UK53|ING1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.6326904296875	2	579.787504	1157.56045	-0.9856	-0.00057144	0.61768	0.00035812	-0.36792	-0.00021332	580.2894479377215	65.512	0.71725	65.898	65.599	66.317	0.38615					33	19	2	0	0	0	0.37624	1	7114	7114		71.877	27.761	1	510280			33194	15000	21921	21931	37883	37883					-0.012023018303807476
LPIFKPLPP	9	Unmodified	_LPIFKPLPP_					0	0	0			REV__ENST00000565923.5_1_15:75287957-75310150:+|nuORF	REV__ENST00000565923.5_1_15:75287957-75310150:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.3283996582031	2	511.325871	1020.63719	-0.052166	-2.6674E-05	2.488	0.0012722	2.4358	0.0012455	511.3270422766062	97.471	2.3305	97.527	97.032	99.363	0.056839					141	53	4	0	0	0	0.7932	1	10237	10237		18.324	3.6603	1	1704400	+		33195	23383	21922	21932	37884	37884					0.12769586247418374
LPIGCPKI	8	Unmodified	_LPIGCPKI_					0	0	0			REV__nc|ENSG00000182652|Q8NH05|OR4Q3	REV__nc|ENSG00000182652|Q8NH05|OR4Q3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.75531005859375	2	420.754224	839.493896	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.239	1	21.802	21.302	22.302	-0.43756								0	0	0	0.29498	1	880	880		26.796	1.3459	1		+		33196	22539	21923	21933	37885	37885					0.06772835864671833
LPIGCPKIR	9	Unmodified	_LPIGCPKIR_					0	0	0			REV__nc|ENSG00000182652|Q8NH05|OR4Q3	REV__nc|ENSG00000182652|Q8NH05|OR4Q3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.803466796875	2	498.80478	995.595007	-0.60409	-0.00030132	-1.5516	-0.00077395	-2.1557	-0.0010753	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.74721	1	4224	4224		37.159	3.6435	1	2424700	+		33197	22539	21924	21934	37886	37886					0.09703287567378993
LPIGCPKIR	9	Unmodified	_LPIGCPKIR_					0	0	0			REV__nc|ENSG00000182652|Q8NH05|OR4Q3	REV__nc|ENSG00000182652|Q8NH05|OR4Q3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.8035888671875	2	498.80478	995.595007	-0.34217	-0.00017068	-1.8322	-0.00091391	-2.1744	-0.0010846	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.77546	1	4226	4226		31.955	5.1588	1	2538600	+		33198	22539	21924	21934	37887	37887					0.09703287567378993
LPIGDVATQY	10	Unmodified	_LPIGDVATQY_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.7847290039062	2	538.784764	1075.55498	0.22148	0.00011933	0.26291	0.00014165	0.48438	0.00026098	538.7847534759444	68.261	1.1684	68.646	68.269	69.437	0.38482					63	27	4	0	0	0	0.0037703	4	7491	7479;7491;7502;7514		136.27	40.078	1	1790700			33199	4039	21925	21935	37888;37889;37890;37891	37889					0.020220193778186513
LPIGDVATQY	10	Unmodified	_LPIGDVATQY_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7847290039062	2	538.784764	1075.55498	-0.62764	-0.00033816	1.2681	0.00068323	0.64046	0.00034507	538.7851860933928	68.117	1.1237	68.665	68.243	69.367	0.54819					70	26	5	0	0	0	9.0156E-07	4	7521	7509;7521;7534;7548		148.99	47.386	1	2087100			33200	4039	21925	21935	37892;37893;37894;37895	37893					0.020220193778186513
LPIGLLES	8	Unmodified	_LPIGLLES_					0	0	0			REV__nc|ENSG00000172197|Q6ZNC8-3|MBOAT1	REV__nc|ENSG00000172197|Q6ZNC8-3|MBOAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.2542724609375	2	421.255111	840.49567	-1.773	-0.00074688	-0.90379	-0.00038073	-2.6768	-0.0011276	421.25456874716457	84.085	1.5006	84.252	83.669	85.17	0.16721					78	34	3	0	0	0	0.83466	1	8137	8137		23.037	0	1	757090	+		33201	21810	21926	21936	37896	37896					0.06904168154289891
LPIGLLPQ	8	Unmodified	_LPIGLLPQ_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.2804260253906	2	425.773471	849.53239	-0.93395	-0.00039765	4.4128	0.0018788	3.4788	0.0014812	425.775066388448	61.83	0.6958	61.846	61.651	62.347	0.015724					33	27	2	0	0	0	0.4196	1	5425	5425		18.324	0	1	145800	+		33202	16141	21927	21937	37897	37897					0.10160464770854105
LPIGLLPQ	8	Unmodified	_LPIGLLPQ_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	425.773471	849.53239	1.0351	0.00044072	2.9172	0.0012421	3.9523	0.0016828	425.7743464275111	61.764	1.0239	61.793	61.634	62.658	0.029575	-0.10038	-0.00024963	NaN	12.207	52	45	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74897	+		33203	16141	21927	21937							0.10160464770854105
LPIGLLPQ	8	Unmodified	_LPIGLLPQ_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	425.773471	849.53239	-0.050545	-2.1521E-05	-1.7808	-0.00075822	-1.8313	-0.00077974	425.774790759441	61.488	0.76699	62.042	61.575	62.342	0.55386	0.14805	-0.0042502	NaN	12.207	24	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62076	+		33204	16141	21927	21937							0.10160464770854105
LPILSTKP	8	Unmodified	_LPILSTKP_					0	0	0			REV__ENSG00000095110|ENST00000534921|NXPE1	REV__ENSG00000095110|ENST00000534921|NXPE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7790222167969	2	434.778754	867.542954	-1.3516	-0.00058764	3.9223	0.0017053	2.5707	0.0011177	434.78034506978366	39.667	1.8641	39.623	39.121	40.985	-0.043697					176	46	5	0	0	0	0.81724	1	3026	3026		14.664	0	1	3943300	+		33205	17053	21928	21938	37898	37898					0.10388447425282266
LPINDVWLY	9	Unmodified	_LPINDVWLY_					0	0	0			REV__nc|ENSG00000101222|Q9Y4P9-2|SPEF1	REV__nc|ENSG00000101222|Q9Y4P9-2|SPEF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.8053588867188	2	566.8055	1131.59645	0.7267	0.0004119	-0.57013	-0.00032315	0.15657	8.8745E-05	566.8050693763629	74.662	0.6973	75.227	74.886	75.583	0.5643					50	16	4	0	0	0	0.12652	1	8470	8470		87.754	10.437	1	1615500	+		33206	17258	21929	21939	37899	37899					0.03591200137134365
LPINHQIIY	9	Unmodified	_LPINHQIIY_					0	0	0		ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.8189086914062	2	555.818941	1109.62333	0.31166	0.00017323	-0.078269	-4.3503E-05	0.2334	0.00012973	555.8189060967787	55.88	0.63483	56.439	56.025	56.659	0.55954					27	16	2	0	0	0	0.28875	1	5771	5771		65.803	7.9919	1	750370			33207	2044	21930	21940	37900	37900					0.0729030874831551
LPINHQIIY	9	Unmodified	_LPINHQIIY_					0	0	0		ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	555.818941	1109.62333	-0.028888	-1.6056E-05	0.22156	0.00012315	0.19267	0.00010709	555.8189733039532	56.052	0.65083	56.453	56.074	56.725	0.40101	0.0065432	0.00014949	NaN	65.803	32	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	921000			33208	2044	21930	21940							0.0729030874831551
LPIRQRTGI	9	Unmodified	_LPIRQRTGI_					0	0	0		ENST00000496420.5_1_7:92123531-92130970:-|nuORF;nc|ENSG00000127980|O43933-2|PEX1;ENST00000484913.5_1_7:92116773-92148321:-|nuORF;ENSG00000127980|ENST00000248633|PEX1	ENST00000496420.5_1_7:92123531-92130970:-|nuORF	ENST00000496420.5_1_7:92123531-92130970:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3282470703125	2	527.330008	1052.64546	-0.30767	-0.00016225	-2.3964	-0.0012637	-2.7041	-0.001426	527.3288775541821	53.771	0.65722	53.709	53.316	53.973	-0.062065					16	15	2	0	0	0	0.20789	1	4395	4395		19.997	3.5236	1	63924			33209	3522	21931	21941	37901	37901					0.12124533216751843
LPIRQRTGI	9	Unmodified	_LPIRQRTGI_					0	0	0		ENST00000496420.5_1_7:92123531-92130970:-|nuORF;nc|ENSG00000127980|O43933-2|PEX1;ENST00000484913.5_1_7:92116773-92148321:-|nuORF;ENSG00000127980|ENST00000248633|PEX1	ENST00000496420.5_1_7:92123531-92130970:-|nuORF	ENST00000496420.5_1_7:92123531-92130970:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	527.330008	1052.64546	0.40565	0.00021391	-0.23957	-0.00012633	0.16609	8.7582E-05	527.829763209933	53.798	0.22698	53.879	53.688	53.915	0.081528	0.085177	0.0014239	NaN	19.997	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32432			33210	3522	21931	21941							0.12124533216751843
LPISEKGLPPN	11	Unmodified	_LPISEKGLPPN_					0	0	0			REV__ENSG00000164180|ENST00000296595|TMEM161B	REV__ENSG00000164180|ENST00000296595|TMEM161B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.8323364257812	2	582.834788	1163.65502	0.82789	0.00048252	-4.392	-0.0025598	-3.5641	-0.0020773	582.8322150120989	94.225	3.555	94.386	93.365	96.92	0.16119					184	84	3	0	0	0	0.68532	1	9563	9563		33.922	4.7516	1	780120	+		33211	21048	21932	21942	37902	37902					0.07974256711622729
LPITFPNL	8	Unmodified	_LPITFPNL_					0	0	0		ENSG00000115267|ENST00000649979|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2526550292969	2	457.770929	913.527304	0.42406	0.00019412	-3.3326	-0.0015256	-2.9086	-0.0013315	457.768699758154	31.783	0.47249	31.89	31.717	32.189	0.10707					12	10	2	0	0	0	0.4196	1	2204	2204		50.025	21.77	1	29731			33212	2827	21933	21943	37903	37903					0.06708160908226546
LPIVLLPF	8	Unmodified	_LPIVLLPF_					0	0	0			REV__nc|ENSG00000165915|Q96H72-2|SLC39A13	REV__nc|ENSG00000165915|Q96H72-2|SLC39A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3011474609375	2	456.301865	910.589176	-0.68927	-0.00031451	-0.87348	-0.00039857	-1.5627	-0.00071308	456.30128778001557	35.219	1.6098	35.163	34.768	36.378	-0.056385					101	36	5	0	0	0	0.88393	1	2334	2334		33.493	0	1	710350	+		33213	21232	21934	21944	37904	37904					0.1303051232737289
LPIVLQGGAE	10	Unmodified	_LPIVLQGGAE_					0	0	0			REV__nc|ENSG00000137601|Q96PY6-4|NEK1	REV__nc|ENSG00000137601|Q96PY6-4|NEK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.9508972167969	2	498.78985	995.565146	2.2711	0.0011328	-0.69469	-0.00034651	1.5765	0.00078632	498.7893071601194	25.17	0.44111	24.739	24.454	24.895	-0.4311					14	9	2	0	0	0	0.37624	1	1252	1252		45.972	1.5951	1	64628	+		33214	19394	21935	21945	37905	37905					0.06718627103043673
LPKDPPKPP	9	Unmodified	_LPKDPPKPP_					0	0	0			REV__ENST00000493660.5_1_17:38792069-38802054:-|nuORF	REV__ENST00000493660.5_1_17:38792069-38802054:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.79541015625	2	494.794935	987.575317	-1.3308	-0.00065846	1.2502	0.00061859	-0.080595	-3.9878E-05	494.7953589400389	59.726	1.0377	60.116	59.651	60.688	0.39077					51	26	3	0	0	0	0.38563	1	6320	6320		58.782	2.0609	1	698020	+		33215	16673	21936	21946	37906	37906					0.08103234828274708
LPKDRAAQF	9	Unmodified	_LPKDRAAQF_					0	0	0			REV__ENST00000481187.5_1_9:139887192-139887402:+|nuORF	REV__ENST00000481187.5_1_9:139887192-139887402:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2940673828125	2	523.293091	1044.57163	0.39646	0.00020747	0.15502	8.1118E-05	0.55148	0.00028859	523.2930181099207	17.247	0.36919	16.636	16.475	16.844	-0.6107					13	7	3	0	0	0	0.74721	1	248	248		37.159	2.9866	1	119630	+		33216	27433	21937	21947	37907	37907					0.05112565054423612
LPKKAKGK	8	Unmodified	_LPKKAKGK_					0	0	0		ENSG00000158417|ENST00000289371|EIF5B	ENSG00000158417|ENST00000289371|EIF5B	ENSG00000158417|ENST00000289371|EIF5B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3002624511719	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.79929	4	6511	6430;6503;6511;6583		18.324	0.95945	1	1072400			33217	5475	21938	21948	37908;37909;37910;37911	37910					0.14627262273359065
LPKKAKGK	8	Unmodified	_LPKKAKGK_					0	0	0		ENSG00000158417|ENST00000289371|EIF5B	ENSG00000158417|ENST00000289371|EIF5B	ENSG00000158417|ENST00000289371|EIF5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.300048828125	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.83058	2	7632	7632;8100		12.959	4.1369	1	5485100			33218	5475	21938	21948	37912;37913	37912					0.14627262273359065
LPKKRRPL	8	Unmodified	_LPKKRRPL_					0	0	0			REV__nc|ENSG00000135913|Q86T82-2|USP37	REV__nc|ENSG00000135913|Q86T82-2|USP37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3451232910156	2	504.345461	1006.67637	0.37851	0.0001909	-0.71644	-0.00036133	-0.33793	-0.00017043	504.3450503233635	54.756	1.9259	55.325	53.982	55.908	0.56836					89	45	3	0	0	0	0.88915	1	5658	5658		35.201	1.0282	1	1764400	+		33219	19266	21939	21949	37914	37914					0.17329731321649433
LPKLLYKN	8	Unmodified	_LPKLLYKN_					0	0	0			REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.81622314453125	2	494.813128	987.611703	0.2049	0.00010139	2.7984	0.0013847	3.0033	0.0014861	494.81428223883705	31.363	0.51293	31.381	31.121	31.634	0.018362					15	11	2	0	0	0	0.88915	1	1690	1690		35.201	4.6971	1	29971	+		33220	21422	21940	21950	37915	37915					0.11740111724975577
LPKLRHGR	8	Unmodified	_LPKLRHGR_					0	0	0			REV__ENST00000503276.2_1_17:48049963-48050176:+|nuORF	REV__ENST00000503276.2_1_17:48049963-48050176:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7712707519531	2	488.811785	975.609017	-0.53737	-0.00026267	-3.6938	-0.0018056	-4.2312	-0.0020682	488.80986951145644	85.6	0.78553	86.048	85.782	86.568	0.44736					25	18	2	0	0	0	0.4196	1	10092	10092		18.324	5.3652	1	208290	+		33221	27844	21941	21951	37916	37916					0.12023701110706497
LPKPKRRR	8	Unmodified	_LPKPKRRR_					0	0	0		ENSG00000233232|ENST00000452313|NPIPB7;ENSG00000198156|ENST00000695563|NPIPB6;ENSG00000196993|ENST00000357796|NPIPB9;ENSG00000255524|ENST00000683297|NPIPB8;ENSG00000196436|ENST00000692376|NPIPB15	ENSG00000233232|ENST00000452313|NPIPB7	ENSG00000233232|ENST00000452313|NPIPB7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7822875976562	2	525.853984	1049.69342	-0.8325	-0.00043777	-2.4711	-0.0012995	-3.3036	-0.0017372	525.8526833344727	47.295	0.15739	48.219	48.16	48.317	0.92315					5	3	2	0	0	0	0.4196	1	4525	4525		1.4648	0.25967	1	260400			33222	8120	21942	21952	37917	37917					0.1705565192744416
LPKQANPKIFI	11	Unmodified	_LPKQANPKIFI_					0	0	0			REV__nc|ENSG00000171824|Q01780-2|EXOSC10	REV__nc|ENSG00000171824|Q01780-2|EXOSC10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	423.59808349609375	3	423.595691	1267.76524	2.7179	0.0011513	1.8713	0.00079266	4.5892	0.001944	423.5963997730453	105.86	2.6165	105.82	105.15	107.76	-0.037148					224	61	5	0	0	0	0.75495	1	11802	11802		18.531	4.445	1	6994400	+		33223	21774	21943	21953	37918	37918					0.14207101770648478
LPKQMEIW	8	Oxidation (M)	_LPKQM(Oxidation (M))EIW_		LPKQM(1)EIW		LPKQM(60)EIW	0	0	1		ENSG00000255587|ENST00000612677|RAB44	ENSG00000255587|ENST00000612677|RAB44	ENSG00000255587|ENST00000612677|RAB44	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.7791748046875	2	530.778428	1059.5423	0.74161	0.00039363	-0.20153	-0.00010697	0.54008	0.00028666	530.7784071072364	55.486	0.74778	55.887	55.571	56.319	0.40101					28	17	2	0	0	0	0.84634	1	5687	5687		60.294	9.1013	1	1596500			33224	8888	21944	21954	37919	37919		157			0.014912847138930374
LPKQTSHDLY	10	Unmodified	_LPKQTSHDLY_					0	0	0			REV__nc|ENSG00000139842|Q13619-2|CUL4A	REV__nc|ENSG00000139842|Q13619-2|CUL4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	601.313232421875	2	601.31422	1200.61389	0.60649	0.00036469	-0.44649	-0.00026848	0.16	9.6211E-05	601.313908815948	49.829	0.62059	50.674	50.354	50.974	0.84501					35	14	3	0	0	0	0.2575	1	4899	4899		77.318	2.2743	1	952200	+		33225	19575	21945	21955	37920	37920					0.02160495672160323
LPKRLTPSRIA	11	Unmodified	_LPKRLTPSRIA_					0	0	0			REV__ENSG00000283247|ENST00000636578|CCDC201	REV__ENSG00000283247|ENST00000636578|CCDC201	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	627.3764038085938	2	626.398422	1250.78229	2.9109	0.0018234	-4.4163	-0.0027664	-1.5054	-0.00094299	626.3954482411118	112.19	0.38975	112.17	112.07	112.46	-0.025414					13	8	2	0	0	0	0.17385	1	12388	12388		25.574	5.5773	1	517470	+		33226	24054	21946	21956	37921	37921					0.16693022376466615
LPKTKKFFLKI	11	Unmodified	_LPKTKKFFLKI_					0	0	0			REV__ENST00000409458.3_2_7:23296839-23297073:+|nuORF	REV__ENST00000409458.3_2_7:23296839-23297073:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.9679870605469	3	454.967236	1361.87988	-0.85763	-0.00039019	0.024217	1.1018E-05	-0.83341	-0.00037918	454.96706899495365	41.367	1.3426	41.373	40.948	42.29	0.0065727					90	33	4	0	0	0	0.80813	1	3017	3017		9.6461	3.3253	1	458770	+		33227	26347	21947	21957	37922	37922					0.2134141125259248
LPKVIQAM	8	Unmodified	_LPKVIQAM_					0	0	0		ENSG00000138246|ENST00000260818|DNAJC13	ENSG00000138246|ENST00000260818|DNAJC13	ENSG00000138246|ENST00000260818|DNAJC13	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27410888671875	2	450.272781	898.531009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.79	1	112.77	112.27	113.27	-0.024811								0	0	0	0.30004	1	12469	12469		21.702	0	1				33228	4283	21948	21958	37923	37923					0.07768507410446546
LPKVIQLKEPM	11	Unmodified	_LPKVIQLKEPM_					0	0	0			REV__ENSG00000115993|ENST00000332624|TRAK2	REV__ENSG00000115993|ENST00000332624|TRAK2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5979309082031	3	432.596703	1294.76828	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.58	1	107.54	107.04	108.04	-0.031487								0	0	0	0.56276	1	11925	11925		21.032	1.7696	1		+		33229	18168	21949	21959	37924	37924					0.13268608833141116
LPLAALNMRVR	11	Unmodified	_LPLAALNMRVR_					0	0	0		ENST00000416282.2_1_3:38180152-38182096:+|nuORF;nc|ENSG00000172936|Q99836-6|MYD88;nc|ENSG00000172936|Q99836-4|MYD88;ENST00000460295.1_1_3:38180152-38181542:+|nuORF;nc|ENSG00000172936|Q99836-3|MYD88;nc|ENSG00000172936|Q99836-2|MYD88;ENSG00000172936|ENST00000650905|MYD88	ENST00000416282.2_1_3:38180152-38182096:+|nuORF	ENST00000416282.2_1_3:38180152-38182096:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3840942382812	2	627.379175	1252.7438	2.3056	0.0014465	2.3142	0.0014519	4.6199	0.0028984	627.3803712370747	111.61	0.69481	111.65	111.16	111.85	0.041832					78	24	4	0	0	0	0.63176	1	13498	13498		40.778	7.9657	1	19059000			33230	11392	21950	21960	37925	37925					0.12753393470279661
LPLAALNMRVR	11	Unmodified	_LPLAALNMRVR_					0	0	0		ENST00000416282.2_1_3:38180152-38182096:+|nuORF;nc|ENSG00000172936|Q99836-6|MYD88;nc|ENSG00000172936|Q99836-4|MYD88;ENST00000460295.1_1_3:38180152-38181542:+|nuORF;nc|ENSG00000172936|Q99836-3|MYD88;nc|ENSG00000172936|Q99836-2|MYD88;ENSG00000172936|ENST00000650905|MYD88	ENST00000416282.2_1_3:38180152-38182096:+|nuORF	ENST00000416282.2_1_3:38180152-38182096:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.885498046875	2	627.379175	1252.7438	6.5869	0.0041325	-1.1306	-0.00070932	5.4563	0.0034232	627.3783410585748	112.58	0.5701	112.61	112.27	112.84	0.032707					46	19	3	0	0	0	0.75495	1	13642	13642		20.947	1.8434	1	89780			33231	11392	21950	21960	37926	37926					0.12753393470279661
LPLAALNMRVR	11	Unmodified	_LPLAALNMRVR_					0	0	0		ENST00000416282.2_1_3:38180152-38182096:+|nuORF;nc|ENSG00000172936|Q99836-6|MYD88;nc|ENSG00000172936|Q99836-4|MYD88;ENST00000460295.1_1_3:38180152-38181542:+|nuORF;nc|ENSG00000172936|Q99836-3|MYD88;nc|ENSG00000172936|Q99836-2|MYD88;ENSG00000172936|ENST00000650905|MYD88	ENST00000416282.2_1_3:38180152-38182096:+|nuORF	ENST00000416282.2_1_3:38180152-38182096:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3834838867188	2	627.379175	1252.7438	6.5831	0.0041301	-1.1234	-0.0007048	5.4597	0.0034253	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.75495	1	13763	13763		20.947	0	1	94412			33232	11392	21950	21960	37927	37927					0.12753393470279661
LPLAILCP	8	Unmodified	_LPLAILCP_					0	0	0		ENST00000456754.6_1_X:47444724-47445414:+|nuORF	ENST00000456754.6_1_X:47444724-47445414:+|nuORF	ENST00000456754.6_1_X:47444724-47445414:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.255615234375	2	420.2566	838.498647	0.7339	0.00030843	-3.9716	-0.0016691	-3.2377	-0.0013606	420.25486417657544	111.77	0.49524	111.84	111.59	112.09	0.069534					26	14	2	0	0	0	0.84567	1	12033	12033		24.504	0	1	275090			33233	11970	21951	21961	37928	37928					0.07293720007430693
LPLEEHYRF	9	Unmodified	_LPLEEHYRF_					0	0	0		ENSG00000024422|ENST00000263277|EHD2;nc|ENSG00000013016|Q9NZN3-2|EHD3;ENSG00000110047|ENST00000320631|EHD1;ENSG00000013016|ENST00000322054|EHD3	ENSG00000024422|ENST00000263277|EHD2	ENSG00000024422|ENST00000263277|EHD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.21270751953125	3	401.876746	1202.60841	0.31331	0.00012591	1.6778	0.00067427	1.9911	0.00080018	402.2121828560393	51.775	0.61558	52.442	52.021	52.637	0.6673					30	14	3	0	0	0	0.66686	1	5170	5170		42.864	6.3364	1	1272600			33234	865	21952	21962	37929	37929					0.015208168803155786
LPLERDAESF	10	Unmodified	_LPLERDAESF_					0	0	0		nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-2|CDC25B;ENSG00000101224|ENST00000245960|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B	nc|ENSG00000101224|P30305-3|CDC25B	nc|ENSG00000101224|P30305-3|CDC25B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.2977294921875	2	588.798403	1175.58225	0.33997	0.00020017	-0.54029	-0.00031812	-0.20032	-0.00011795	588.7983098211278	55.515	0.62215	56.083	55.7	56.322	0.56836					32	14	3	0	0	0	0.74383	1	5716	5716		42.338	12.02	1	532340			33235	1917	21953	21963	37930	37930					0.0014850291818220285
LPLERDAESF	10	Unmodified	_LPLERDAESF_					0	0	0		nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-2|CDC25B;ENSG00000101224|ENST00000245960|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B	nc|ENSG00000101224|P30305-3|CDC25B	nc|ENSG00000101224|P30305-3|CDC25B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	588.798403	1175.58225	-0.33487	-0.00019717	-0.12859	-7.5713E-05	-0.46345	-0.00027288	588.7986397694991	55.744	0.53736	56.145	55.782	56.319	0.40102	0.031124	0.00020197	NaN	42.338	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	474590			33236	1917	21953	21963							0.0014850291818220285
LPLESLWY	8	Unmodified	_LPLESLWY_					0	0	0		ENST00000360392.4_1_14:51464439-51464655:-|nuORF	ENST00000360392.4_1_14:51464439-51464655:-|nuORF	ENST00000360392.4_1_14:51464439-51464655:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.771240234375	2	510.773668	1019.53278	0.55725	0.00028463	-4.4737	-0.0022851	-3.9165	-0.0020004	510.7712620410407	62.387	0.90892	62.942	62.603	63.512	0.55449					40	20	3	0	0	0	0.9159	1	6690	6690		44.531	5.2782	1	180740			33237	10447	21954	21964	37931	37931					0.023798397000291516
LPLESLWY	8	Unmodified	_LPLESLWY_					0	0	0		ENST00000360392.4_1_14:51464439-51464655:-|nuORF	ENST00000360392.4_1_14:51464439-51464655:-|nuORF	ENST00000360392.4_1_14:51464439-51464655:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	510.773668	1019.53278	-0.60194	-0.00030746	-3.1299	-0.0015986	-3.7318	-0.0019061	510.77197901502535	62.515	0.73716	62.903	62.578	63.315	0.38779	-0.019441	0.00062516	NaN	44.531	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173790			33238	10447	21954	21964							0.023798397000291516
LPLETLVSP	9	Unmodified	_LPLETLVSP_					0	0	0		ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;ENST00000470054.5_2_21:11038782-11047532:-|nuORF;ENST00000496773.1_1_21:11038782-11047532:-|nuORF	ENSG00000055609|ENST00000262189|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.787353515625	2	484.786776	967.558998	-2.1932	-0.0010632	3.4269	0.0016613	1.2337	0.00059809	484.78805875753903	41.198	1.3446	41.59	41.379	42.723	0.39209					59	35	3	0	0	0	0.77546	1	3611	3611		31.955	1.4512	1	3024000			33239	1027	21955	21965	37932	37932					0.07392108871533765
LPLETSKGRCP	11	Unmodified	_LPLETSKGRCP_					0	0	0		ENST00000451251.5_1_1:249152755-249153022:-|nuORF	ENST00000451251.5_1_1:249152755-249153022:-|nuORF	ENST00000451251.5_1_1:249152755-249153022:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8243408203125	2	600.823898	1199.63324	-0.59314	-0.00035637	1.6155	0.00097062	1.0224	0.00061425	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.57736	1	6835	6835		46.457	6.3986	1	825510			33240	11899	21956	21966	37933	37933					0.04141128691412632
LPLFLLSFP	9	Unmodified	_LPLFLLSFP_					0	0	0			REV__ENST00000560962.5_1_15:63892664-63892859:-|nuORF	REV__ENST00000560962.5_1_15:63892664-63892859:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.82080078125	2	523.817879	1045.6212	3.6756	0.0019253	1.5008	0.00078612	5.1764	0.0027115	523.8186030353656	104.57	1.3629	104.79	103.76	105.12	0.22681					58	32	2	0	0	0	0.76996	1	12781	12781		33.516	7.9415	1	220220	+		33241	28770	21957	21967	37934	37934					0.10021880010526729
LPLFPSYLL	9	Unmodified	_LPLFPSYLL_					0	0	0		ENST00000376681.7_1_17:46840236-46881289:-|nuORF	ENST00000376681.7_1_17:46840236-46881289:-|nuORF	ENST00000376681.7_1_17:46840236-46881289:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8170166015625	2	531.815336	1061.61612	1.595	0.00084823	1.2697	0.00067524	2.8646	0.0015235	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.69914	1	8870	8870		40.573	7.057	1	1345000			33242	10822	21958	21968	37935	37935					0.08777576147895161
LPLFVEGRSS	10	Unmodified	_LPLFVEGRSS_					0	0	0			REV__ENST00000374825.8_1_6:32939382-32940003:+|nuORF	REV__ENST00000374825.8_1_6:32939382-32940003:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.8077392578125	2	552.806031	1103.59751	-0.25876	-0.00014305	3.8831	0.0021466	3.6244	0.0020036	552.8082663100047	67.983	0.75287	68.532	68.072	68.825	0.54819					33	17	2	0	0	0	0.51302	1	7488	7488		54.776	4.7518	1	297840	+		33243	25799	21959	21969	37936	37936					0.04985414506040797
LPLGRQHG	8	Unmodified	_LPLGRQHG_					0	0	0		ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.2506408691406	2	439.253769	876.492984	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.644	1	19.574	19.074	20.074	-0.070013								0	0	0	0.29199	1	443	443		29.842	0	1				33244	3152	21960	21970	37937	37937					0.049797575399907146
LPLHVLPLY	9	Unmodified	_LPLHVLPLY_					0	0	0		ENSG00000150990|ENST00000308736|DHX37	ENSG00000150990|ENST00000308736|DHX37	ENSG00000150990|ENST00000308736|DHX37	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.7837524414062	2	532.828778	1063.643	0.3134	0.00016699	-0.83093	-0.00044274	-0.51753	-0.00027576	532.8283860824931	78.481	0.63625	78.891	78.717	79.354	0.41059					21	14	2	0	0	0	0.20789	1	8969	8969		29.842	0	1	126490			33245	5086	21961	21971	37938	37938					0.1137268475908968
LPLHVLPLY	9	Unmodified	_LPLHVLPLY_					0	0	0		ENSG00000150990|ENST00000308736|DHX37	ENSG00000150990|ENST00000308736|DHX37	ENSG00000150990|ENST00000308736|DHX37	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.7838134765625	2	532.828778	1063.643	-0.19519	-0.000104	-0.42224	-0.00022498	-0.61742	-0.00032898	532.8287297379585	78.39	0.631	78.953	78.659	79.29	0.56332					27	14	2	0	0	0	0.20789	1	9016	9016		29.842	0	1	112460			33246	5086	21961	21971	37939	37939					0.1137268475908968
LPLITLPES	9	Unmodified	_LPLITLPES_					0	0	0			REV__ENSG00000143816|ENST00000272164|WNT9A	REV__ENSG00000143816|ENST00000272164|WNT9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7958068847656	2	491.794601	981.574648	0.32756	0.00016109	1.929	0.00094865	2.2565	0.0011097	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.7932	1	3693	3693		23.042	1.3402	1	1346800	+		33247	19844	21962	21972	37940	37940					0.08312395388566074
LPLIVGIEE	9	Unmodified	_LPLIVGIEE_					0	0	0		ENST00000339276.5_1_1:27190745-27190907:+|nuORF	ENST00000339276.5_1_1:27190745-27190907:+|nuORF	ENST00000339276.5_1_1:27190745-27190907:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.795654296875	2	491.794601	981.574648	-1.4864	-0.00073099	4.0311	0.0019825	2.5447	0.0012515	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.76996	1	4576	4576		33.516	3.0119	1	781720			33248	10217	21963	21973	37941	37941					0.08312395388554705
LPLKAIDI	8	Unmodified	_LPLKAIDI_					0	0	0			REV__ENSG00000006071|ENST00000389817|ABCC8	REV__ENSG00000006071|ENST00000389817|ABCC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7874755859375	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.85277	1	2913	2913		25.45	1.2474	1	9571700	+		33249	16095	21964	21974	37942	37942					0.11308733942325944
LPLKKGMQLKP	11	Unmodified	_LPLKKGMQLKP_					0	0	0			REV__ENST00000437800.6_1_12:6925109-6928492:+|nuORF	REV__ENST00000437800.6_1_12:6925109-6928492:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.26434326171875	3	418.265176	1251.7737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.719	1	48.757	48.257	49.257	0.037731								0	0	0	0.56276	1	3729	3729		12.433	0	1		+		33250	16168	21965	21975	37943	37943					0.15788332415627337
LPLKLNLHKSL	11	Unmodified	_LPLKLNLHKSL_					0	0	0			REV__ENSG00000101353|ENST00000343811|MROH8	REV__ENSG00000101353|ENST00000343811|MROH8	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	426.2950439453125	3	425.943091	1274.80744	-1.3718	-0.00058432	3.73	0.0015888	2.3582	0.0010045	425.94422427222025	75.131	0.83112	75.131	74.515	75.346	0					41	30	2	0	0	0	0.17368	1	6777	6777		35.178	1.0917	1	32804	+		33251	17272	21966	21976	37944	37944					0.18103077179011962
LPLLAVVGLL	10	Unmodified	_LPLLAVVGLL_					0	0	0			REV__ENST00000262570.9_2_7:132766727-132766832:-|nuORF	REV__ENST00000262570.9_2_7:132766727-132766832:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.34796142578125	2	504.346803	1006.67905	2.0026	0.00101	0.50234	0.00025335	2.5049	0.0012633	504.34690233028635	36.516	1.5993	36.956	36.186	37.785	0.44043					102	38	4	0	0	0	0.85108	1	2870	2870		19.36	0	1	2044400	+		33252	24426	21967	21977	37945	37945					0.175981419359573
LPLLDDLIA	9	Unmodified	_LPLLDDLIA_					0	0	0			REV__ENSG00000001626|ENST00000003084|CFTR	REV__ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957458496094	2	491.794601	981.574648	-0.71044	-0.00034939	3.0101	0.0014803	2.2996	0.001131	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.7932	1	4217	4217		19.36	1.0356	1	571510	+		33253	16042	21968	21978	37946	37946					0.08312395388566074
LPLLLAALRSS	11	Unmodified	_LPLLLAALRSS_					0	0	0			REV__nc|ENSG00000163701|Q8NFR9-3|IL17RE;REV__ENST00000489181.5_1_3:9944520-9950978:+|nuORF	REV__nc|ENSG00000163701|Q8NFR9-3|IL17RE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3681640625	2	577.368798	1152.72304	-1.363	-0.00078696	-2.7149	-0.0015675	-4.0779	-0.0023544	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.7342	1	10801	10801		25.574	2.9944	1	14386000	+		33254	20960;27616	21969	21979	37947	37947					0.15279126362247553
LPLLLIEPM	9	Unmodified	_LPLLLIEPM_					0	0	0			REV__ENST00000537473.2_1_12:57081448-57081670:-|nuORF	REV__ENST00000537473.2_1_12:57081448-57081670:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8203125	2	519.817021	1037.61949	0.51227	0.00026629	-3.3617	-0.0017475	-2.8495	-0.0014812	520.3172137923285	53.198	0.41287	53.611	53.291	53.704	0.4139					11	9	2	0	0	0	0.20789	1	5362	5362		24.203	4.8428	1	74979	+		33255	28421	21970	21980	37948	37948					0.10218502930251816
LPLLLLLSTP	10	Unmodified	_LPLLLLLSTP_					0	0	0		ENST00000571210.1_1_17:19288554-19290486:-|nuORF;ENSG00000166482|ENST00000299610|MFAP4;nc|ENSG00000166482|P55083-2|MFAP4	ENST00000571210.1_1_17:19288554-19290486:-|nuORF	ENST00000571210.1_1_17:19288554-19290486:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.860107421875	2	540.357368	1078.70018	-0.068166	-3.6834E-05	2.3888	0.0012908	2.3206	0.001254	540.3584971364328	36.917	1.6881	36.864	36.337	38.025	-0.053558					103	37	4	0	0	0	0.85958	1	2454	2454		15.642	0.77694	1	646150			33256	6203	21971	21981	37949	37949					0.16398107244799576
LPLLLLLSTP	10	Unmodified	_LPLLLLLSTP_					0	0	0		ENST00000571210.1_1_17:19288554-19290486:-|nuORF;ENSG00000166482|ENST00000299610|MFAP4;nc|ENSG00000166482|P55083-2|MFAP4	ENST00000571210.1_1_17:19288554-19290486:-|nuORF	ENST00000571210.1_1_17:19288554-19290486:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3641357421875	2	540.357368	1078.70018	-0.87065	-0.00047046	3.4074	0.0018412	2.5367	0.0013707	540.3590107608643	36.885	1.6	36.896	36.391	37.991	0.011173					96	35	4	0	0	0	0.85958	1	2386	2386		15.642	4.1308	1	594400			33257	6203	21971	21981	37950	37950					0.16398107244799576
LPLLLLLSTP	10	Unmodified	_LPLLLLLSTP_					0	0	0		ENST00000571210.1_1_17:19288554-19290486:-|nuORF;ENSG00000166482|ENST00000299610|MFAP4;nc|ENSG00000166482|P55083-2|MFAP4	ENST00000571210.1_1_17:19288554-19290486:-|nuORF	ENST00000571210.1_1_17:19288554-19290486:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.3580932617188	2	540.357368	1078.70018	-0.017297	-9.3466E-06	2.5708	0.0013891	2.5535	0.0013798	540.3585627881598	36.881	1.2861	36.905	36.409	37.695	0.023624					76	34	3	0	0	0	0.88541	1	2037	2037		11.511	2.6887	1	515190			33258	6203	21971	21981	37951	37951					0.16398107244799576
LPLLLVLALS	10	Unmodified	_LPLLLVLALS_					0	0	0		ENSG00000164171|ENST00000296585|ITGA2	ENSG00000164171|ENST00000296585|ITGA2	ENSG00000164171|ENST00000296585|ITGA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3617553710938	2	526.359911	1050.70527	-1.5676	-0.00082514	3.904	0.0020549	2.3364	0.0012298	526.3617973555264	35.031	1.6441	35.031	34.615	36.259	0					148	43	4	0	0	0	0.88106	1	1877	1877		12.207	0.69583	1	1307600			33259	5933	21972	21982	37952	37952					0.1819441110740172
LPLLRNLIALK	11	Unmodified	_LPLLRNLIALK_					0	0	0		ENST00000542579.5_1_10:11377172-11377550:+|nuORF	ENST00000542579.5_1_10:11377172-11377550:+|nuORF	ENST00000542579.5_1_10:11377172-11377550:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.429931640625	2	632.42919	1262.84383	1.461	0.00092401	-0.48958	-0.00030962	0.97147	0.00061438	632.4287200366232	108.38	0.64588	108.51	108.19	108.83	0.13026					29	17	2	0	0	0	0.80784	1	11655	11655		9.7057	2.9701	1	3788100			33260	13538	21973	21983	37953	37953					0.22291954075717513
LPLNPVLQTSL	11	Unmodified	_LPLNPVLQTSL_					0	0	0		ENSG00000189320|ENST00000338588|FAM180A	ENSG00000189320|ENST00000338588|FAM180A	ENSG00000189320|ENST00000338588|FAM180A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8554077148438	2	597.858264	1193.70197	-1.2963	-0.00077498	-2.0956	-0.0012529	-3.3918	-0.0020278	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.60058	1	9353	9353		44.377	3.599	1	2401200			33261	8002	21974	21984	37954	37954					0.11287116262769814
LPLPDKEF	8	Unmodified	_LPLPDKEF_					0	0	0		nc|ENSG00000112964|P10912-4|GHR;ENSG00000112964|ENST00000230882|GHR	nc|ENSG00000112964|P10912-4|GHR	nc|ENSG00000112964|P10912-4|GHR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.76519775390625	2	479.765843	957.517133	-0.7446	-0.00035723	0.67391	0.00032332	-0.070684	-3.3912E-05	479.76609977021917	80.277	1.2892	80.803	80.317	81.607	0.52676					70	30	4	0	0	0	0.91472	1	9288	9288		44.117	1.6423	1	5775600			33262	2689	21975	21985	37955	37955					0.03667553182992833
LPLPSQVGSRY	11	Unmodified	_LPLPSQVGSRY_					0	0	0		ENST00000393094.6_1_11:107879697-107879871:+|nuORF	ENST00000393094.6_1_11:107879697-107879871:+|nuORF	ENST00000393094.6_1_11:107879697-107879871:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.8372192382812	2	608.837862	1215.66117	0.91546	0.00055737	-1.1525	-0.00070171	-0.23708	-0.00014434	608.8370690912545	54.628	0.75341	55.034	54.699	55.452	0.40663					45	17	4	0	0	0	0.37012	2	5588	5575;5588		61.691	12.274	1	857990			33263	11039	21976	21986	37956;37957	37957					0.061967749431460106
LPLPSQVGSRY	11	Unmodified	_LPLPSQVGSRY_					0	0	0		ENST00000393094.6_1_11:107879697-107879871:+|nuORF	ENST00000393094.6_1_11:107879697-107879871:+|nuORF	ENST00000393094.6_1_11:107879697-107879871:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.83740234375	2	608.837862	1215.66117	-0.21146	-0.00012874	0.40923	0.00024915	0.19777	0.00012041	608.8379733010858	54.427	0.58752	55.012	54.749	55.337	0.58474					36	13	3	0	0	0	0.26196	1	5558	5558		76.17	17.388	1	860050			33264	11039	21976	21986	37958	37958					0.061967749431460106
LPLPTIKS	8	Unmodified	_LPLPTIKS_					0	0	0		ENSG00000135049|ENST00000357081|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7796630859375	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.80706	1	3539	3539		19.36	1.0356	1	2750200			33265	3978	21977	21987	37959	37959					0.10388447425282266
LPLSLGLSFP	10	Unmodified	_LPLSLGLSFP_					0	0	0		ENST00000263980.7_1_1:27480949-27481393:-|nuORF	ENST00000263980.7_1_1:27480949-27481393:-|nuORF	ENST00000263980.7_1_1:27480949-27481393:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.3099365234375	2	522.310418	1042.60628	0.79738	0.00041648	-1.4107	-0.0007368	-0.61328	-0.00032032	522.3095528626822	76.545	0.58643	76.945	76.532	77.119	0.3997					25	15	2	0	0	0	0.4094	1	8703	8703		63.306	9.9548	1	274280			33266	9470	21978	21988	37960	37960					0.08668388142518779
LPLSRLRGSRG	11	Unmodified	_LPLSRLRGSRG_					0	0	0			REV__ENST00000327300.11_1_1:32479474-32479630:+|nuORF	REV__ENST00000327300.11_1_1:32479474-32479630:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.3692016601562	2	606.370195	1210.72584	-0.02762	-1.6748E-05	-1.0617	-0.00064376	-1.0893	-0.0006605	606.3694476526515	94.093	3.5324	94.139	93.078	96.61	0.045456					200	83	3	0	0	0	0.72739	1	9924	9924		27.047	2.5281	1	863170	+		33267	25087	21979	21989	37961	37961					0.12890394539772387
LPLTHFELY	9	Unmodified	_LPLTHFELY_					0	0	0		ENST00000596386.1_1_19:40477100-40485896:+|nuORF;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;nc|ENSG00000013275|P43686-2|PSMC4;ENSG00000013275|ENST00000157812|PSMC4;ENST00000601697.5_1_19:40477100-40486546:+|nuORF	ENST00000596386.1_1_19:40477100-40485896:+|nuORF	ENST00000596386.1_1_19:40477100-40485896:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.8053588867188	2	566.8055	1131.59645	-0.098719	-5.5954E-05	0.10487	5.944E-05	0.0061501	3.4859E-06	566.8054481877534	74.815	0.82557	75.207	74.829	75.654	0.3911					53	19	4	0	0	0	0.043636	3	8436	8436;8447;8460		110.34	22.583	1	1557100			33268	807	21980	21990	37962;37963;37964	37962					0.03591200137134365
LPLTHFELY	9	Unmodified	_LPLTHFELY_					0	0	0		ENST00000596386.1_1_19:40477100-40485896:+|nuORF;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;nc|ENSG00000013275|P43686-2|PSMC4;ENSG00000013275|ENST00000157812|PSMC4;ENST00000601697.5_1_19:40477100-40486546:+|nuORF	ENST00000596386.1_1_19:40477100-40485896:+|nuORF	ENST00000596386.1_1_19:40477100-40485896:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.8058471679688	2	566.8055	1131.59645	0.7267	0.0004119	-0.57013	-0.00032315	0.15657	8.8745E-05	566.8050693763629	74.662	0.6973	75.227	74.886	75.583	0.5643					50	16	4	0	0	0	0.027997	2	8446	8446;8458		119.56	33.563	1	1615500			33269	807	21980	21990	37965;37966	37965					0.03591200137134365
LPLTRGRPGEL	11	Unmodified	_LPLTRGRPGEL_					0	0	0		ENST00000604157.1_1_4:153457505-153457595:+|nuORF	ENST00000604157.1_1_4:153457505-153457595:+|nuORF	ENST00000604157.1_1_4:153457505-153457595:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.8582153320312	2	604.859129	1207.70371	-1.0601	-0.00064122	-0.4497	-0.00027201	-1.5098	-0.00091323	604.8590287609827	81.871	2.3278	81.986	81.043	83.371	0.11426					72	54	2	0	0	0	0.70847	1	7857	7857		27.047	3.5246	1	398390			33270	14427	21981	21991	37967	37967					0.10816170071393572
LPLTRGRPGEL	11	Unmodified	_LPLTRGRPGEL_					0	0	0		ENST00000604157.1_1_4:153457505-153457595:+|nuORF	ENST00000604157.1_1_4:153457505-153457595:+|nuORF	ENST00000604157.1_1_4:153457505-153457595:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.859130859375	2	604.859129	1207.70371	0.044967	2.7199E-05	-0.8945	-0.00054104	-0.84953	-0.00051385	604.8584867584212	80.792	1.0733	81.319	80.907	81.98	0.52676					69	21	4	0	0	0	0.67568	1	9388	9388		26.063	0	1	4362400			33271	14427	21981	21991	37968	37968					0.10816170071393572
LPLTRGRPGEL	11	Unmodified	_LPLTRGRPGEL_					0	0	0		ENST00000604157.1_1_4:153457505-153457595:+|nuORF	ENST00000604157.1_1_4:153457505-153457595:+|nuORF	ENST00000604157.1_1_4:153457505-153457595:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8587646484375	2	604.859129	1207.70371	0.082073	4.9642E-05	-1.0653	-0.00064433	-0.98318	-0.00059469	604.8584757159402	82.084	1.3276	82.558	81.718	83.045	0.47383					56	29	2	0	0	0	0.33008	2	9508	9508;9532		50.034	19.764	1	3105600			33272	14427	21981	21991	37969;37970	37969					0.10816170071393572
LPLTSTLPLP	10	Unmodified	_LPLTSTLPLP_					0	0	0		ENST00000493664.5_1_3:147108719-147114575:-|nuORF	REV__ENST00000493664.5_1_3:147108719-147114575:-|nuORF	REV__ENST00000493664.5_1_3:147108719-147114575:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.7799682617188	2	526.323525	1050.6325	0.36211	0.00019059	2.0481	0.0010779	2.4102	0.0012685	526.3245811920841	63.377	1.4489	63.343	62.534	63.983	-0.033714					91	59	2	0	0	0	0.37624	1	5936	5936		21.96	0	1	71400			33273	12734	21982	21992	37971	37971					0.10920657313999982
LPLVVLTVQ	9	Unmodified	_LPLVVLTVQ_					0	0	0			REV__nc|ENSG00000197901|Q4U2R8-3|SLC22A6	REV__nc|ENSG00000197901|Q4U2R8-3|SLC22A6	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.3148498535156	2	491.320786	980.627018	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.351	1	59.351	58.851	59.851	0.00051117								0	0	0	0.32022	1	5091	5091		23.523	0.48021	1		+		33274	23278	21983	21993	37972	37972					0.1359297852218333
LPMSLLVRGVK	11	Unmodified	_LPMSLLVRGVK_					0	0	0		ENST00000530015.1_1_11:74913922-74914042:+|nuORF	ENST00000530015.1_1_11:74913922-74914042:+|nuORF	ENST00000530015.1_1_11:74913922-74914042:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.9228515625	3	404.921409	1211.7424	2.788	0.0011289	0.93176	0.00037729	3.7198	0.0015062	404.92169157251993	26.492	2.181	26.459	26.021	28.202	-0.032125					96	52	4	0	0	0	0.76579	1	1136	1136		18.531	2.0012	1	297020			33275	13336	21984	21994	37973	37973					0.14499759381533295
LPMVRGSPRVR	11	Unmodified	_LPMVRGSPRVR_					0	0	0		ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3762817382812	2	634.374423	1266.73429	-0.13876	-8.8026E-05	3.9077	0.0024789	3.7689	0.0023909	634.3767849583303	112.54	0.33102	112.48	112.42	112.75	-0.063889					18	10	2	0	0	0	0.75921	1	12219	12219		19.997	0.89325	1	250970			33276	3679	21985	21995	37974	37974					0.11159625184768629
LPMVRGSPRVR	11	Unmodified	_LPMVRGSPRVR_					0	0	0		ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3765258789062	2	634.374423	1266.73429	1.3188	0.00083664	3.3559	0.0021289	4.6747	0.0029655	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.6921	2	12450	12450;12924		32.812	3.6424	1	12917000			33277	3679	21985	21995	37975;37976	37975					0.11159625184768629
LPMVRGSPRVR	11	Unmodified	_LPMVRGSPRVR_					0	0	0		ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3767700195312	2	634.374423	1266.73429	2.1873	0.0013876	2.4807	0.0015737	4.668	0.0029612	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.63176	1	13367	13367		40.778	1.5253	1	6886400			33278	3679	21985	21995	37977	37977					0.11159625184768629
LPMVRGSPRVR	11	Unmodified	_LPMVRGSPRVR_					0	0	0		ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3760375976562	2	634.374423	1266.73429	2.2049	0.0013987	1.9396	0.0012305	4.1445	0.0026292	634.375598285312	112.22	1.4492	112.25	112.06	113.51	0.030602					90	61	2	0	0	0	0.63176	1	13559	13559		40.778	1.5253	1	7800800			33279	3679	21985	21995	37978	37978					0.11159625184768629
LPMVRGSPRVR	11	Unmodified	_LPMVRGSPRVR_					0	0	0		ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.37451171875	2	634.374423	1266.73429	6.6613	0.0042258	-2.596	-0.0016468	4.0653	0.0025789	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.6921	1	13395	13395		32.812	0.85756	1	7041100			33280	3679	21985	21995	37979	37979					0.11159625184768629
LPNAVITRII	10	Unmodified	_LPNAVITRII_					0	0	0		ENST00000479871.1_1_9:116172333-116172573:-|nuORF;ENSG00000148229|ENST00000374171|POLE3	ENST00000479871.1_1_9:116172333-116172573:-|nuORF	ENST00000479871.1_1_9:116172333-116172573:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.3532104492188	2	555.355691	1108.69683	-0.86355	-0.00047958	-3.4797	-0.0019325	-4.3433	-0.0024121	555.3536421650435	101.16	2.3681	101.19	100.7	103.07	0.031036					166	56	5	0	0	0	0.82886	1	10804	10804		37.812	12.237	1	6361400			33281	4942	21986	21996	37980	37980					0.14682857190791765
LPNAVITRII	10	Unmodified	_LPNAVITRII_					0	0	0		ENST00000479871.1_1_9:116172333-116172573:-|nuORF;ENSG00000148229|ENST00000374171|POLE3	ENST00000479871.1_1_9:116172333-116172573:-|nuORF	ENST00000479871.1_1_9:116172333-116172573:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.353515625	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.77314	1	10467	10467		40.778	1.5253	1	5963400			33282	4942	21986	21996	37981	37981					0.14682857190791765
LPNDEIWTY	9	Unmodified	_LPNDEIWTY_					0	0	0		ENSG00000197776|ENST00000359332|KLHDC1;ENST00000555704.5_1_14:50159830-50218487:+|nuORF	ENSG00000197776|ENST00000359332|KLHDC1	ENSG00000197776|ENST00000359332|KLHDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.7772827148438	2	575.774396	1149.53424	-0.69529	-0.00040033	-3.5578	-0.0020485	-4.253	-0.0024488	576.2721367028935	59.197	0.38256	59.75	59.615	59.998	0.55323					12	9	2	0	0	0	0.64922	1	6254	6254		44.117	0	1	190430			33283	8198	21987	21997	37982	37982					-0.0345457100186195
LPNDLGFTD	9	Unmodified	_LPNDLGFTD_					0	0	0		ENST00000560046.1_1_14:24586548-24588423:+|nuORF;nc|ENSG00000100897|Q8TEB1-3|DCAF11;nc|ENSG00000100897|Q8TEB1-2|DCAF11;ENSG00000100897|ENST00000446197|DCAF11	ENST00000560046.1_1_14:24586548-24588423:+|nuORF	ENST00000560046.1_1_14:24586548-24588423:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.2370300292969	2	496.24019	990.465826	0.25594	0.00012701	-4.174	-0.0020713	-3.9181	-0.0019443	496.2378970327027	30.637	0.71332	30.662	30.337	31.05	0.025013					40	21	3	0	0	0	0.76764	1	1590	1590		34.173	2.2177	1	168640			33284	1881	21988	21998	37983	37983					-0.029788155817072948
LPNFKQNEF	9	Unmodified	_LPNFKQNEF_					0	0	0		ENSG00000129515|ENST00000362031|SNX6;ENST00000556303.1_1_14:35074800-35099358:-|nuORF;ENST00000601728.1_1_19:23310047-23310578:-|nuORF	ENSG00000129515|ENST00000362031|SNX6	ENSG00000129515|ENST00000362031|SNX6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.7900390625	2	568.790381	1135.56621	0.46048	0.00026191	-0.39971	-0.00022735	0.060762	3.4561E-05	568.7901441593218	54.901	0.79583	55.308	54.781	55.577	0.40663					41	18	3	0	0	0	0.21969	1	5600	5600		71.877	9.7701	1	437090			33285	3592	21989	21999	37984	37984					0.003848414719413995
LPNIFRLQIK	10	Unmodified	_LPNIFRLQIK_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.393310546875	2	621.390065	1240.76558	-0.078753	-4.8936E-05	4.3785	0.0027208	4.2997	0.0026718	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.85694	1	10919	10919		21.96	2.8564	1	10411000	+		33286	18431	21990	22000	37985	37985					0.15482521490503132
LPNNIVDVW	9	Unmodified	_LPNNIVDVW_					0	0	0		nc|ENSG00000111802|O95551-2|TDP2;nc|ENSG00000111802|O95551-3|TDP2;ENSG00000111802|ENST00000378198|TDP2	nc|ENSG00000111802|O95551-2|TDP2	nc|ENSG00000111802|O95551-2|TDP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2872924804688	2	535.287474	1068.5604	0.074907	4.0097E-05	-0.011919	-6.3801E-06	0.062988	3.3717E-05	535.2873650272661	86.055	0.9417	86.499	86.116	87.058	0.44331					50	22	3	0	0	0	0.31972	3	10066	10055;10066;10078		63.306	10.37	1	1098700			33287	14848	21991	22001	37986;37987;37988	37987					0.028857429602794582
LPNNIVDVW	9	Unmodified	_LPNNIVDVW_					0	0	0		nc|ENSG00000111802|O95551-2|TDP2;nc|ENSG00000111802|O95551-3|TDP2;ENSG00000111802|ENST00000378198|TDP2	nc|ENSG00000111802|O95551-2|TDP2	nc|ENSG00000111802|O95551-2|TDP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.287353515625	2	535.287474	1068.5604	-0.84772	-0.00045377	0.96754	0.00051791	0.11983	6.4141E-05	535.2878294310157	86.153	1.0232	86.6	86.194	87.217	0.44736					59	24	4	0	0	0	0.47272	2	10105	10093;10105		53.351	5.6941	1	1143000			33288	14848	21991	22001	37989;37990	37990					0.028857429602794582
LPNQGLAH	8	Unmodified	_LPNQGLAH_					0	0	0		nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	424.7556457519531	2	425.232502	848.450451	-1.9634	-0.00083489	3.5921	0.0015275	1.6287	0.00069259	425.2338604944476	34.393	0.80605	34.393	33.956	34.762	0					33	21	2	0	0	0	0.4196	1	1867	1867		21.702	0	1	106850			33289	14977	21992	22002	37991	37991					0.020163624117572
LPNQGLAH	8	Unmodified	_LPNQGLAH_					0	0	0		nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	425.232502	848.450451	-0.11267	-4.7913E-05	1.868	0.00079434	1.7553	0.00074643	425.23310241225187	34.421	1.3482	34.416	33.547	34.896	-0.0047417	0.12984	-4.2337E-05	NaN	21.702	63	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	169810			33290	14977	21992	22002							0.020163624117572
LPNQGLAH	8	Unmodified	_LPNQGLAH_					0	0	0		nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	425.232502	848.450451	-0.60067	-0.00025542	2.6316	0.001119	2.0309	0.00086361	425.2334761260889	34.438	0.94419	34.381	33.866	34.81	-0.056381	0.094673	0.00060705	NaN	21.702	49	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	226190			33291	14977	21992	22002							0.020163624117572
LPNQGLAH	8	Unmodified	_LPNQGLAH_					0	0	0		nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	425.232502	848.450451	1.3314	0.00056616	0.56236	0.00023913	1.8938	0.00080529	425.23261321565974	34.313	0.96451	34.316	33.794	34.759	0.0026054	0.029286	-0.0011527	NaN	21.702	50	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	223930			33292	14977	21992	22002							0.020163624117572
LPNQGLAH	8	Unmodified	_LPNQGLAH_					0	0	0		nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	425.232502	848.450451	0.85215	0.00036236	1.2976	0.00055179	2.1498	0.00091415	425.23299340261883	33.817	0.62511	33.987	33.526	34.151	0.16971	-0.30002	-0.00052743	NaN	21.702	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147080			33293	14977	21992	22002							0.020163624117572
LPNQGLAH	8	Unmodified	_LPNQGLAH_					0	0	0		nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	425.232502	848.450451	1.2498	0.00053145	0.96633	0.00041091	2.2161	0.00094237	425.2328279366357	33.804	0.62285	34.109	33.66	34.282	0.30494	-0.17756	-0.00080919	NaN	21.702	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185060			33294	14977	21992	22002							0.020163624117572
LPNRIISGLVK	11	Unmodified	_LPNRIISGLVK_					0	0	0		nc|ENSG00000131781|P49326-3|FMO5;ENSG00000131781|ENST00000254090|FMO5	nc|ENSG00000131781|P49326-3|FMO5	nc|ENSG00000131781|P49326-3|FMO5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.92962646484375	3	403.92744	1208.76049	0.5143	0.00020774	4.1381	0.0016715	4.6524	0.0018792	403.92898888715627	45.158	1.872	45.621	44.495	46.367	0.46313					165	45	4	0	0	0	0.80164	1	4100	4100		10.998	1.3521	1	5214800			33295	3748	21993	22003	37992	37992					0.16446217627867554
LPNRLPPG	8	Unmodified	_LPNRLPPG_					0	0	0		chr20:1163183-1164392|21|90.38|0.65|7.13|+|2|PSMF1,None|2;ENST00000484891.1_1_20:1115545-1145721:+|nuORF;ENSG00000125818|ENST00000335877|PSMF1	chr20:1163183-1164392|21|90.38|0.65|7.13|+|2|PSMF1,None|2	chr20:1163183-1164392|21|90.38|0.65|7.13|+|2|PSMF1,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2575988769531	2	432.25852	862.502486	0.40609	0.00017553	-1.8282	-0.00079027	-1.4221	-0.00061473	432.2575947247643	68.412	1.5069	68.797	68.224	69.731	0.38482					60	35	2	0	0	0	0.88915	1	7505	7505		35.201	3.2459	1	399210			33296	357	21994	22004	37993	37993					0.06573525825513116
LPNRLVVIVS	10	Unmodified	_LPNRLVVIVS_					0	0	0			REV__nc|ENSG00000125743|P62316-2|SNRPD2	REV__nc|ENSG00000125743|P62316-2|SNRPD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.3530883789062	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.8651	1	10478	10478		25.574	0	1	5963400	+		33297	15708	21995	22005	37994	37994					0.14682857190791765
LPNTLKQGI	9	Unmodified	_LPNTLKQGI_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;ENST00000465703.5_1_6:31936641-31937206:+|nuORF;ENST00000470453.1_1_6:31936465-31937326:+|nuORF;ENST00000483553.5_1_6:31936441-31937206:+|nuORF	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.3013610839844	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.266	1	64.296	63.796	64.796	0.030243								0	0	0	0.31001	1	5654	5654		42.864	11.334	1				33298	8435	21996	22006	37995	37995					0.08914333339953373
LPNYPKSVK	9	Unmodified	_LPNYPKSVK_					0	0	0		ENST00000476588.5_1_3:93781949-93803329:+|nuORF;ENSG00000178694|ENST00000314622|NSUN3	ENST00000476588.5_1_3:93781949-93803329:+|nuORF	ENST00000476588.5_1_3:93781949-93803329:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3033447265625	2	523.305667	1044.59678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.326	1	15.243	14.743	15.743	-0.083363								0	0	0	0.31738	1	28	28		24.519	2.5593	1				33299	7219	21997	22007	37996	37996					0.0762661985700106
LPPAAGRH	8	Unmodified	_LPPAAGRH_					0	0	0			REV__ENST00000295400.10_1_2:70780942-70781005:-|nuORF	REV__ENST00000295400.10_1_2:70780942-70781005:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2925720214844	2	409.735212	817.455871	0.057498	2.3559E-05	0.50913	0.00020861	0.56663	0.00023217	409.7351763420065	19.474	0.31675	18.844	18.62	18.937	-0.6296					10	6	2	0	0	0	0.4196	1	530	530		37.028	1.8278	1	25180	+		33300	24698	21998	22008	37997	37997					0.03984085994227371
LPPALCARLAA	11	Unmodified	_LPPALCARLAA_					0	0	0		ENST00000482153.1_1_10:135122453-135123793:+|nuORF;ENSG00000198546|ENST00000361518|ZNF511;nc|ENSG00000198546|Q8NB15-1|ZNF511	ENST00000482153.1_1_10:135122453-135123793:+|nuORF	ENST00000482153.1_1_10:135122453-135123793:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.317138671875	2	548.320794	1094.62703	-0.46378	-0.0002543	-4.0133	-0.0022006	-4.477	-0.0024549	548.3184669915545	109.38	0.36529	109.38	109.26	109.62	0					29	18	2	0	0	0	0.72228	1	11373	11373		27.882	0	1	1624200			33301	8283	21999	22009	37998	37998					0.08350655250524142
LPPAPGASP	9	Unmodified	_LPPAPGASP_					0	0	0		ENST00000580315.1_1_17:71282696-71307081:-|nuORF;ENST00000263354.7_1_19:47990961-47991231:-|nuORF	ENST00000580315.1_1_17:71282696-71307081:-|nuORF	ENST00000580315.1_1_17:71282696-71307081:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.7239990234375	2	403.723978	805.433404	-1.8572	-0.00074981	2.1457	0.00086627	0.28846	0.00011646	403.7247227583041	64.772	1.8283	64.897	63.712	65.54	0.12545					133	73	3	0	0	0	0.72402	1	5683	5683		38.806	1.647	1	1035700			33302	9459	22000	22010	37999	37999					0.022904418059511045
LPPAWLRAL	9	Unmodified	_LPPAWLRAL_					0	0	0		nc|ENSG00000119946|Q9NRU3-2|CNNM1;ENSG00000119946|ENST00000356713|CNNM1	nc|ENSG00000119946|Q9NRU3-2|CNNM1	nc|ENSG00000119946|Q9NRU3-2|CNNM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8203125	2	518.818744	1035.62294	0.48903	0.00025372	2.5365	0.001316	3.0255	0.0015697	518.8198813500153	53.188	1.5362	53.602	53.044	54.58	0.4139					90	36	4	0	0	0	0.67235	1	5388	5388		42.474	5.3154	1	3852900			33303	3104	22001	22011	38000	38000					0.10654933819137113
LPPDIRILAW	10	Unmodified	_LPPDIRILAW_					0	0	0		ENSG00000110060|ENST00000227474|PUS3	ENSG00000110060|ENST00000227474|PUS3	ENSG00000110060|ENST00000227474|PUS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8565063476562	2	597.355691	1192.69683	2.4166	0.0014436	-2.8752	-0.0017175	-0.45857	-0.00027393	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.86218	2	10042	10042;10213		32.812	3.6424	1	8047600			33304	2505	22002	22012	38001;38002	38001					0.10818857190770359
LPPELLLEI	9	Unmodified	_LPPELLLEI_					0	0	0		nc|ENSG00000132004|Q5XUX1-2|FBXW9;ENSG00000132004|ENST00000393261|FBXW9	nc|ENSG00000132004|Q5XUX1-2|FBXW9	nc|ENSG00000132004|Q5XUX1-2|FBXW9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8201293945312	2	518.818076	1035.6216	0.48903	0.00025372	3.8254	0.0019847	4.3144	0.0022384	518.8198813500153	53.188	1.5362	53.602	53.044	54.58	0.4139					90	36	4	0	0	0	0.58151	4	5318	5318;5338;5350;5376		47.916	1.9636	1	3852900			33305	14919	22003	22013	38003;38004;38005;38006	38003					0.10521254939726532
LPPGVFIP	8	Unmodified	_LPPGVFIP_					0	0	0		ENST00000602034.1_1_19:39408732-39410638:-|nuORF	ENST00000602034.1_1_19:39408732-39410638:-|nuORF	ENST00000602034.1_1_19:39408732-39410638:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2535400390625	2	420.254914	838.495276	0.7339	0.00030843	0.038874	1.6337E-05	0.77277	0.00032476	420.25486417657544	111.77	0.49524	111.84	111.59	112.09	0.069534					26	14	2	0	0	0	0.80127	1	12020	12020		16.705	0	1	275090			33306	14395	22004	22014	38007	38007					0.06956793225083402
LPPGVHISY	9	Unmodified	_LPPGVHISY_					0	0	0		ENSG00000139626|ENST00000267082|ITGB7;nc|ENSG00000139626|P26010-2|ITGB7;ENST00000548269.1_1_12:53587490-53588125:-|nuORF	ENSG00000139626|ENST00000267082|ITGB7	ENSG00000139626|ENST00000267082|ITGB7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7748718261719	2	491.77146	981.528367	-0.048862	-2.4029E-05	-0.26426	-0.00012996	-0.31312	-0.00015398	491.77117306455165	54.918	1.5436	55.324	54.781	56.325	0.40663					89	36	3	0	0	0	0.066271	9	5581	5581;5592;5604;5615;5622;5634;5647;5658;5672		101.21	40.918	1	1264500			33307	4384	22005	22015	38008;38009;38010;38011;38012;38013;38014;38015;38016	38008					0.03686375277140996
LPPGVHISY	9	Unmodified	_LPPGVHISY_					0	0	0		ENSG00000139626|ENST00000267082|ITGB7;nc|ENSG00000139626|P26010-2|ITGB7;ENST00000548269.1_1_12:53587490-53588125:-|nuORF	ENSG00000139626|ENST00000267082|ITGB7	ENSG00000139626|ENST00000267082|ITGB7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7733154296875	2	491.77146	981.528367	-0.31973	-0.00015723	0.127	6.2455E-05	-0.19273	-9.4778E-05	491.7713611799445	54.664	1.6301	55.233	54.733	56.363	0.56836					90	38	3	0	0	0	0.036317	9	5581	5572;5581;5594;5606;5617;5629;5641;5655;5667		114.59	54.292	1	1431300			33308	4384	22005	22015	38017;38018;38019;38020;38021;38022;38023;38024;38025	38018					0.03686375277140996
LPPHLPPKP	9	Unmodified	_LPPHLPPKP_					0	0	0			REV__chr3:106926196-106927835|20|15.85|0.0|12.7|-|2|TE_info:HERVH-int,HERVH-int_dup1181,ERV1,LTR,acceptor,-,106925057,106926196|None,LINC00882|3	REV__chr3:106926196-106927835|20|15.85|0.0|12.7|-|2|TE_info:HERVH-int,HERVH-int_dup1181,ERV1,LTR,acceptor,-,106925057,106926196|None,LINC00882|3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.3036193847656	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.32	1	51.297	50.797	51.797	-0.02343								0	0	0	0.33676	1	4484	4484		18.324	0.95945	1		+		33309	15797	22006	22016	38026	38026					0.09887244927790562
LPPIQVAS	8	Unmodified	_LPPIQVAS_					0	0	0		nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-5|EP400;ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91|EP400	nc|ENSG00000183495|Q96L91-4|EP400	nc|ENSG00000183495|Q96L91-4|EP400	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.74603271484375	2	412.747453	823.480354	0.7641	0.00031538	-3.3391	-0.0013782	-2.575	-0.0010628	412.7458735732829	85.139	3.1869	85.067	83.891	87.078	-0.07196					136	73	4	0	0	0	0.86288	1	8772	8772		26.796	1.3459	1	1556000			33310	7535	22007	22017	38027	38027					0.06155301357091503
LPPLLPRAARG	11	Unmodified	_LPPLLPRAARG_					0	0	0		ENST00000528663.1_1_8:145675335-145675698:-|nuORF	ENST00000528663.1_1_8:145675335-145675698:-|nuORF	ENST00000528663.1_1_8:145675335-145675698:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8663330078125	2	580.866757	1159.71896	-0.64777	-0.00037627	-1.0197	-0.00059231	-1.6675	-0.00096858	580.8660675480357	62.454	0.90882	63.009	62.214	63.123	0.55449					53	20	3	0	0	0	0.64498	3	6693	6668;6681;6693		39.253	1.4413	1	770700			33311	13305	22008	22018	38028;38029;38030	38030					0.14549081659220064
LPPLLRHGP	9	Unmodified	_LPPLLRHGP_					0	0	0			REV__ENST00000316586.8_1_2:242434694-242435003:-|nuORF	REV__ENST00000316586.8_1_2:242434694-242435003:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.3053283691406	2	500.308544	998.602535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.462	1	94.66	94.16	95.16	0.19827								0	0	0	0.32894	1	9594	9594		20.482	0	1		+		33312	24953	22009	22019	38031	38031					0.10317763159321203
LPPLLVASG	9	Unmodified	_LPPLLVASG_					0	0	0		ENSG00000039319|ENST00000505560|ZFYVE16;ENST00000512558.5_1_5:79729945-79747536:+|nuORF	ENSG00000039319|ENST00000505560|ZFYVE16	ENSG00000039319|ENST00000505560|ZFYVE16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801208496094	2	433.770929	865.527304	1.1273	0.000489	3.9094	0.0016958	5.0367	0.0021848	433.77107498521286	32.677	1.3148	32.889	32.337	33.651	0.21168					85	30	4	0	0	0	0.7932	1	2356	2356		25.45	0	1	1051100			33313	922	22010	22020	38032	38032					0.08916160908233906
LPPLLWREEL	10	Unmodified	_LPPLLWREEL_					0	0	0		ENSG00000162738|ENST00000368061|VANGL2	ENSG00000162738|ENST00000368061|VANGL2	ENSG00000162738|ENST00000368061|VANGL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5815734863281	3	422.579929	1264.71796	2.9692	0.0012547	1.8573	0.00078486	4.8265	0.0020396	422.58062707178027	97.728	3.629	97.776	96.312	99.941	0.048164					208	84	4	0	0	0	0.86802	1	10381	10381		27.047	1.1556	1	464700			33314	5729	22011	22021	38033	38033					0.0961882249964674
LPPPHCVPW	9	Unmodified	_LPPPHCVPW_					0	0	0			REV__ENST00000319863.12_1_11:770415-770625:-|nuORF	REV__ENST00000319863.12_1_11:770415-770625:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.26904296875	2	523.26803	1044.52151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.007	1	70.037	69.537	70.537	0.030495								0	0	0	0.2792	1	6620	6620		39.021	0.21535	1		+		33315	24993	22012	22022	38034	38034					0.0010273912489537906
LPPPLAGPPNR	11	Unmodified	_LPPPLAGPPNR_					0	0	0		ENSG00000111605|ENST00000435070|CPSF6;nc|ENSG00000111605|Q16630-2|CPSF6	ENSG00000111605|ENST00000435070|CPSF6	ENSG00000111605|ENST00000435070|CPSF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.8347778320312	2	564.82984	1127.64513	-0.64095	-0.00036203	4.062	0.0022943	3.421	0.0019323	564.8319455630552	66.491	0.41823	66.536	66.356	66.774	0.045113					32	19	2	0	0	0	0.72228	1	5904	5904		27.882	3.3631	1	150640			33316	2588	22013	22023	38035	38035					0.08641113496878461
LPPPLLSRVT	10	Unmodified	_LPPPLLSRVT_					0	0	0		ENST00000448841.5_1_10:104574309-104574387:+|nuORF	ENST00000448841.5_1_10:104574309-104574387:+|nuORF	ENST00000448841.5_1_10:104574309-104574387:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8407592773438	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.8651	1	10666	10666		25.574	9.1009	1	44929000			33317	11864	22014	22024	38036	38036					0.12811168299458586
LPPPVHVDY	9	Unmodified	_LPPPVHVDY_					0	0	0		ENST00000539429.1_1_12:124144026-124144779:+|nuORF;nc|ENSG00000111358|Q13889-2|GTF2H3;ENSG00000111358|ENST00000543341|GTF2H3	ENST00000539429.1_1_12:124144026-124144779:+|nuORF	ENST00000539429.1_1_12:124144026-124144779:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8203125	2	518.776742	1035.53893	0.49237	0.00025543	-0.65182	-0.00033815	-0.15945	-8.2721E-05	518.7762544180642	53.132	1.4889	53.546	52.88	54.369	0.4139					101	35	4	0	0	0	0.20789	1	5362	5362		37.159	0	1	975100			33318	2577	22015	22025	38037	38037					0.022583579315551106
LPPPVQKLPL	10	Unmodified	_LPPPVQKLPL_					0	0	0		ENST00000331552.11_1_19:19312573-19312657:-|nuORF	ENST00000331552.11_1_19:19312573-19312657:-|nuORF	ENST00000331552.11_1_19:19312573-19312657:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.6024780273438	2	551.35516	1100.69577	0.064242	3.542E-05	-2.5685	-0.0014162	-2.5043	-0.0013807	551.3534450206266	19.407	0.69387	18.937	18.609	19.303	-0.46967					17	14	2	0	0	0	0.37624	1	507	507		6.7355	0	1	52234			33319	10125	22016	22026	38038	38038					0.1494464282188801
LPPQTCSGH	9	Unmodified	_LPPQTCSGH_					0	0	0		ENST00000300134.7_1_12:57490210-57490348:-|nuORF	ENST00000300134.7_1_12:57490210-57490348:-|nuORF	ENST00000300134.7_1_12:57490210-57490348:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.2202453613281	2	470.221277	938.428001	-0.29675	-0.00013954	3.1111	0.0014629	2.8144	0.0013234	470.22271364487864	23.81	1.415	23.758	23.13	24.545	-0.052114					47	37	2	0	0	0	0.58151	1	844	844		47.916	7.343	1	30544			33320	9792	22017	22027	38039	38039					-0.04367605048162204
LPPQVQTIV	9	Unmodified	_LPPQVQTIV_					0	0	0			REV__ENST00000473978.5_1_3:195974446-195974587:-|nuORF	REV__ENST00000473978.5_1_3:195974446-195974587:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.80047607421875	2	497.800217	993.585882	-1.7144	-0.00085342	1.4379	0.00071578	-0.27651	-0.00013765	497.8007994469304	69.145	0.62259	69.178	68.849	69.472	0.033005					71	28	3	0	0	0	0.58668	1	6617	6617		47.657	0	1	392890	+		33321	27289	22018	22028	38040	38040					0.08883217482718919
LPPRLAAM	8	Unmodified	_LPPRLAAM_					0	0	0			REV__nc|ENSG00000126254|Q9BTD8-3|RBM42	REV__nc|ENSG00000126254|Q9BTD8-3|RBM42	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.76055908203125	2	434.757298	867.500044	2.1234	0.00092316	2.0238	0.00087986	4.1472	0.001803	434.758413846185	87.485	3.2565	87.538	86.101	89.357	0.053024					140	76	4	0	0	0	0.86791	1	9001	9001		28.254	0	1	1543500	+		33322	29827	22019	22029	38041	38041					0.06099354096204479
LPPRQAAKR	9	Unmodified	_LPPRQAAKR_					0	0	0			REV__ENST00000361976.6_1_10:121556311-121556365:+|nuORF	REV__ENST00000361976.6_1_10:121556311-121556365:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8203125	2	518.82235	1035.63015	0.48902	0.00025372	-4.4126	-0.0022894	-3.9236	-0.0020356	518.8198813500153	53.188	1.5362	53.602	53.044	54.58	0.4139					90	36	4	0	0	0	0.62081	1	5362	5362		45.952	3.4775	1	3852900	+		33323	25518	22020	22030	38042	38042					0.11375666419553454
LPPRVWAVV	9	Unmodified	_LPPRVWAVV_					0	0	0		nc|ENSG00000215041|Q96JN8-2|NEURL4;ENSG00000215041|ENST00000399464|NEURL4	nc|ENSG00000215041|Q96JN8-2|NEURL4	nc|ENSG00000215041|Q96JN8-2|NEURL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8202514648438	2	518.818744	1035.62294	-0.16117	-8.3619E-05	3.0935	0.0016049	2.9323	0.0015213	518.8201883857264	52.919	1.3295	53.533	52.991	54.321	0.61436					72	31	3	0	0	0	0.49378	2	5352	5352;5377		52.299	4.3836	1	3507900			33324	8645	22021	22031	38043;38044	38043					0.10654933819137113
LPPTSLLLLL	10	Unmodified	_LPPTSLLLLL_					0	0	0			REV__nc|ENSG00000128567|O00592-2|PODXL	REV__nc|ENSG00000128567|O00592-2|PODXL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.360107421875	2	540.357368	1078.70018	-0.09847	-5.3209E-05	2.5238	0.0013637	2.4253	0.0013105	540.3585531343375	36.951	1.7168	36.927	36.371	38.088	-0.023979					87	38	3	0	0	0	0.88945	1	2368	2368		10.866	0.6003	1	433100	+		33325	18779	22022	22032	38045	38045					0.16398107244822313
LPPTSLLLLL	10	Unmodified	_LPPTSLLLLL_					0	0	0			REV__nc|ENSG00000128567|O00592-2|PODXL	REV__nc|ENSG00000128567|O00592-2|PODXL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.3616943359375	2	540.357368	1078.70018	-0.017297	-9.3466E-06	2.5708	0.0013891	2.5535	0.0013798	540.3585627881598	36.881	1.2861	36.905	36.409	37.695	0.023624					76	34	3	0	0	0	0.91289	1	2029	2029		7.1934	0	1	515190	+		33326	18779	22022	22032	38046	38046					0.16398107244822313
LPPTVVSLA	9	Unmodified	_LPPTVVSLA_					0	0	0			REV__ENST00000441224.5_1_2:201981610-201994530:+|nuORF	REV__ENST00000441224.5_1_2:201981610-201994530:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.7742614746094	2	448.776211	895.537869	-1.2452	-0.00055882	2.0051	0.00089985	0.75992	0.00034103	448.7770146242483	41.311	0.93086	41.27	40.922	41.853	-0.040806					43	24	2	0	0	0	0.7932	1	3119	3119		24.203	1.1603	1	291330	+		33327	26751	22023	22033	38047	38047					0.08592143562657384
LPPVSKSR	8	Unmodified	_LPPVSKSR_					0	0	0		nc|ENSG00000167216|Q8IYT4-2|KATNAL2;ENSG00000167216|ENST00000683218|KATNAL2	nc|ENSG00000167216|Q8IYT4-2|KATNAL2	nc|ENSG00000167216|Q8IYT4-2|KATNAL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.24053955078125	2	442.271627	882.528701	0.1836	8.1201E-05	-1.7183	-0.00075994	-1.5347	-0.00067874	442.2708425378854	80.851	0.61708	81.378	80.949	81.567	0.52676					19	14	2	0	0	0	0.4196	1	9342	9342		47.916	0	1	144590			33328	6279	22024	22034	38048	38048					0.08273794997001005
LPPVTELK	8	Unmodified	_LPPVTELK_					0	0	0			REV__ENSG00000181585|ENST00000643606|TMIE	REV__ENSG00000181585|ENST00000643606|TMIE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.7735900878906	2	448.776211	895.537869	-1.3729	-0.00061613	2.498	0.001121	1.125	0.00050489	448.77718996036316	41.146	1.1035	41.15	40.845	41.948	0.0043983					56	33	2	0	0	0	0.8347	1	2649	2649		23.042	1.3402	1	242730	+		33329	22467	22025	22035	38049	38049					0.08592143562657384
LPPYITVLP	9	Unmodified	_LPPYITVLP_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.80157470703125	2	506.807511	1011.60047	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.96	1	110.08	109.58	110.58	0.12289								0	0	0	0.33301	1	11827	11827		19.36	1.0356	1				33330	7954	22026	22036	38050	38050					0.09513289630842792
LPQAHASPAA	10	Unmodified	_LPQAHASPAA_					0	0	0			REV__nc|ENSG00000187260|Q86TI4-4|WDR86	REV__nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.756591796875	2	481.756341	961.498129	-0.58942	-0.00028396	1.0865	0.00052342	0.49705	0.00023946	481.75665787402625	57.408	0.79066	57.392	57.106	57.897	-0.01643					68	40	2	0	0	0	0.86718	1	4859	4859		27.882	1.0861	1	310440	+		33331	30112	22027	22037	38051	38051					0.015840166119346577
LPQALGII	8	Unmodified	_LPQALGII_					0	0	0		ENST00000303329.8_1_15:80888135-80888297:+|nuORF	ENST00000303329.8_1_15:80888135-80888297:+|nuORF	ENST00000303329.8_1_15:80888135-80888297:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2674865722656	2	412.765646	823.516739	0.8823	0.00036418	0.81659	0.00033706	1.6989	0.00070124	412.7668384055558	39.31	1.1423	39.322	38.717	39.86	0.011173					50	26	3	0	0	0	0.82464	1	2751	2751		21.702	0	1	209500			33332	9832	22028	22038	38052	38052					0.09792178253815109
LPQDVILKF	9	Unmodified	_LPQDVILKF_					0	0	0		ENST00000471144.1_1_20:47852884-47860241:+|nuORF;ENST00000484427.5_1_20:47852594-47860368:+|nuORF;ENSG00000124228|ENST00000618172|DDX27;nc|ENSG00000124228|Q96GQ7|DDX27	ENST00000471144.1_1_20:47852884-47860241:+|nuORF	ENST00000471144.1_1_20:47852884-47860241:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.823974609375	2	536.823692	1071.63283	-0.49743	-0.00026703	0.66098	0.00035483	0.16356	8.7802E-05	536.8239138816871	74.554	1.1546	74.945	74.458	75.612	0.3911					71	27	4	0	0	0	0.0041213	5	8397	8386;8397;8409;8422;8437		138.06	42.247	1	2723200			33333	3323	22029	22039	38053;38054;38055;38056;38057	38054					0.09988077033858644
LPQDVILKF	9	Unmodified	_LPQDVILKF_					0	0	0		ENST00000471144.1_1_20:47852884-47860241:+|nuORF;ENST00000484427.5_1_20:47852594-47860368:+|nuORF;ENSG00000124228|ENST00000618172|DDX27;nc|ENSG00000124228|Q96GQ7|DDX27	ENST00000471144.1_1_20:47852884-47860241:+|nuORF	ENST00000471144.1_1_20:47852884-47860241:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.82421875	2	536.823692	1071.63283	-0.41548	-0.00022304	0.53489	0.00028714	0.11941	6.4104E-05	536.8238712610516	74.415	1.2947	74.974	74.283	75.578	0.55891					72	30	4	0	0	0	2.0213E-05	5	8434	8398;8408;8421;8434;8447		154.12	40.707	1	2827800			33334	3323	22029	22039	38058;38059;38060;38061;38062	38061					0.09988077033858644
LPQGHEFELY	10	Unmodified	_LPQGHEFELY_					0	0	0		ENST00000529918.1_1_8:61178441-61193874:-|nuORF;ENSG00000178538|ENST00000317995|CA8	ENST00000529918.1_1_8:61178441-61193874:-|nuORF	ENST00000529918.1_1_8:61178441-61193874:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	616.7982788085938	2	616.800946	1231.58734	-0.63081	-0.00038909	-2.8429	-0.0017535	-3.4737	-0.0021426	616.7991260346982	45.904	0.72873	45.876	45.54	46.269	-0.028782					34	16	3	0	0	0	0.80179	1	3727	3727		39.253	2.8061	1	355320			33335	7211	22030	22040	38063	38063					-0.019191932191688466
LPQGPLGTSF	10	Unmodified	_LPQGPLGTSF_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7740478515625	2	508.7742	1015.53385	-0.20853	-0.0001061	0.18012	9.1641E-05	-0.028414	-1.4456E-05	508.7741429631401	74.801	1.2844	75.192	74.747	76.031	0.3911					75	30	4	0	0	0	2.8438E-11	6	8453	8418;8429;8441;8453;8465;8477		161.9	76.539	1	2669700			33336	8948	22031	22041	38064;38065;38066;38067;38068;38069	38067					0.026700540689603258
LPQGPLGTSF	10	Unmodified	_LPQGPLGTSF_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7738952636719	2	508.7742	1015.53385	0.69919	0.00035573	-0.67264	-0.00034222	0.026554	1.351E-05	508.77369763362594	74.647	1.262	75.209	74.762	76.024	0.56223					82	30	4	0	0	0	2.8438E-11	5	8463	8427;8440;8451;8463;8474		161.9	76.539	1	2897300			33337	8948	22031	22041	38070;38071;38072;38073;38074	38073					0.026700540689603258
LPQHLSDEL	9	Unmodified	_LPQHLSDEL_					0	0	0			REV__nc|ENSG00000106948|Q7Z591-5|AKNA	REV__nc|ENSG00000106948|Q7Z591-5|AKNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2699584960938	2	526.274564	1050.53457	0.76856	0.00040447	-0.87035	-0.00045804	-0.10179	-5.357E-05	526.2739756029589	55.537	0.74533	55.938	55.614	56.359	0.40101					39	17	3	0	0	0	0.28163	1	5725	5725		66.429	0	1	1585300	+		33338	17637	22032	22042	38075	38075					0.011328487179980584
LPQIPCDELF	10	Unmodified	_LPQIPCDELF_					0	0	0			REV__ENSG00000281106|ENST00000629372|TMEM272	REV__ENSG00000281106|ENST00000629372|TMEM272	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.7969970703125	2	587.794275	1173.574	0.71244	0.00041877	1.9612	0.0011528	2.6736	0.0015715	587.7953749754141	51.31	0.579	52.062	51.818	52.397	0.75174					27	13	3	0	0	0	0.54701	1	5109	5109		52.937	1.4089	1	1145500	+		33339	24047	22033	22043	38076	38076					-0.005847673228117856
LPQLPLFF	8	Unmodified	_LPQLPLFF_					0	0	0		ENST00000495415.5_1_10:99220751-99221398:-|nuORF	ENST00000495415.5_1_10:99220751-99221398:-|nuORF	ENST00000495415.5_1_10:99220751-99221398:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	488.2911071777344	2	487.789121	973.56369	-1.0855	-0.00052952	3.9357	0.0019198	2.8501	0.0013903	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.83466	1	7559	7559		23.037	1.0768	1	309700			33340	12767	22034	22044	38077	38077					0.0758503780494948
LPQPERDAIY	10	Unmodified	_LPQPERDAIY_					0	0	0		ENST00000467628.1_1_3:18393447-18419817:-|nuORF;ENSG00000182568|ENST00000338745|SATB1;nc|ENSG00000182568|Q01826-2|SATB1;ENST00000606296.1_1_3:18393447-18393747:-|nuORF	ENST00000467628.1_1_3:18393447-18419817:-|nuORF	ENST00000467628.1_1_3:18393447-18419817:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	601.3145141601562	2	601.31422	1200.61389	0.83034	0.00049929	-0.8355	-0.0005024	-0.0051651	-3.1058E-06	601.3135621041464	49.957	0.58118	50.404	50.184	50.765	0.4476					31	13	3	0	0	0	0.51401	2	4917	4899;4917		54.722	10.345	1	922650			33341	7461	22035	22045	38078;38079	38079					0.02160495672160323
LPQPERDAIY	10	Unmodified	_LPQPERDAIY_					0	0	0		ENST00000467628.1_1_3:18393447-18419817:-|nuORF;ENSG00000182568|ENST00000338745|SATB1;nc|ENSG00000182568|Q01826-2|SATB1;ENST00000606296.1_1_3:18393447-18393747:-|nuORF	ENST00000467628.1_1_3:18393447-18419817:-|nuORF	ENST00000467628.1_1_3:18393447-18419817:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	601.316650390625	2	601.31422	1200.61389	0.60649	0.00036469	-0.44649	-0.00026848	0.16	9.6211E-05	601.313908815948	49.829	0.62059	50.674	50.354	50.974	0.84501					35	14	3	0	0	0	0.23224	1	4889	4889		80.455	0.74203	1	952200			33342	7461	22035	22045	38080	38080					0.02160495672160323
LPQSFPAPAP	10	Unmodified	_LPQSFPAPAP_					0	0	0		nc|ENSG00000072310|P36956-6|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-2|SREBF1;ENSG00000072310|ENST00000261646|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;ENST00000476994.1_1_17:17723326-17726886:-|nuORF	nc|ENSG00000072310|P36956-6|SREBF1	nc|ENSG00000072310|P36956-6|SREBF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.7740478515625	2	512.776742	1023.53893	-0.58658	-0.00030079	-4.1137	-0.0021094	-4.7003	-0.0024102	512.7745753480814	45.169	0.86986	45.165	44.837	45.706	-0.0041618					40	19	3	0	0	0	0.74274	1	3599	3599		42.396	4.5846	1	686670			33343	1273	22036	22046	38081	38081					0.028103579315597926
LPQSPAPP	8	Unmodified	_LPQSPAPP_					0	0	0		ENST00000370557.5_1_X:139014736-139014982:-|nuORF	ENST00000370557.5_1_X:139014736-139014982:-|nuORF	ENST00000370557.5_1_X:139014736-139014982:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.72393798828125	2	403.723978	805.433404	-1.1089	-0.00044771	1.5518	0.00062651	0.44287	0.0001788	403.7244510631445	64.933	1.6766	64.971	63.905	65.582	0.037849					135	64	4	0	0	0	0.9295	1	5718	5718		55.504	9.5523	1	1390300			33344	10640	22037	22047	38082	38082					0.022904418059397358
LPQSTWAIDF	10	Unmodified	_LPQSTWAIDF_					0	0	0			REV__nc|ENSG00000205744|Q8IV53-2|DENND1C	REV__nc|ENSG00000205744|Q8IV53-2|DENND1C	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.2935180664062	2	589.298039	1176.58152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.672	1	42.737	42.237	43.237	0.065037								0	0	0	0.45132	1	2888	2888		24.519	1.1413	1		+		33345	23575	22038	22048	38083	38083					0.00029708269107686647
LPQVIKSARVM	11	Unmodified	_LPQVIKSARVM_					0	0	0		ENSG00000116984|ENST00000366577|MTR	ENSG00000116984|ENST00000366577|MTR	ENSG00000116984|ENST00000366577|MTR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.392578125	2	621.373558	1240.73256	-0.29026	-0.00018036	-1.2873	-0.0007999	-1.5776	-0.00098026	621.3733470397484	104.78	0.16	104.76	104.66	104.82	-0.014809					5	3	2	0	0	0	0.17275	1	11302	11302		33.922	19.057	1	45486			33346	2957	22039	22049	38084	38084					0.12182571376138185
LPRAAFAA	8	Unmodified	_LPRAAFAA_					0	0	0		ENST00000224862.7_1_10:104182019-104182794:+|nuORF	ENST00000224862.7_1_10:104182019-104182794:+|nuORF	ENST00000224862.7_1_10:104182019-104182794:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7390441894531	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.81548	1	2031	2031		20.482	0	1	1654100			33347	9184	22040	22050	38085	38085					0.0502585427974509
LPRASKSIAHK	11	Unmodified	_LPRASKSIAHK_					0	0	0		ENST00000407004.7_2_19:10795127-10795319:+|nuORF	ENST00000407004.7_2_19:10795127-10795319:+|nuORF	ENST00000407004.7_2_19:10795127-10795319:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2469482421875	3	403.247173	1206.71969	-1.9293	-0.00077799	1.1746	0.00047366	-0.7547	-0.00030433	403.24758115209465	104.53	3.0767	104.62	103.79	106.87	0.093857					248	75	5	0	0	0	0.76322	1	11111	11111		17.167	5.7121	1	9819800			33348	11281	22041	22051	38086	38086					0.12459876308253115
LPRDVLGKK	9	Unmodified	_LPRDVLGKK_					0	0	0			REV__ENSG00000261150|ENST00000615648|EPPK1	REV__ENSG00000261150|ENST00000615648|EPPK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.326904296875	2	513.326934	1024.63931	0.83572	0.000429	-0.86541	-0.00044424	-0.029685	-1.5238E-05	513.326236894648	17.831	0.36691	17.349	17.192	17.559	-0.48256					20	7	4	0	0	0	0.38563	1	318	318		58.782	4.0056	1	291020	+		33349	23941	22042	22052	38087	38087					0.12798014985219197
LPREPGLAGQP	11	Unmodified	_LPREPGLAGQP_					0	0	0		ENST00000261917.3_1_15:73660243-73660336:-|nuORF	ENST00000261917.3_1_15:73660243-73660336:-|nuORF	ENST00000261917.3_1_15:73660243-73660336:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.8245849609375	2	567.81693	1133.61931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.405	1	64.792	64.292	65.292	0.3868								0	0	0	0.56276	1	6958	6958		29.17	2.1227	1				33350	9422	22043	22053	38088	38088					0.05784219254610434
LPRERPRR	8	Unmodified	_LPRERPRR_					0	0	0		nc|ENSG00000188803|Q6ZSJ9|SHISA6;nc|ENSG00000188803|Q6ZSJ9-2|SHISA6;ENSG00000188803|ENST00000441885|SHISA6	nc|ENSG00000188803|Q6ZSJ9|SHISA6	nc|ENSG00000188803|Q6ZSJ9|SHISA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.3304443359375	2	540.330873	1078.64719	0.73412	0.00039667	-1.9208	-0.0010379	-1.1867	-0.00064121	540.3297192888753	88.578	3.0781	88.728	87.598	90.676	0.15055					169	72	3	0	0	0	0.87479	1	8819	8819		30.504	0	1	476540			33351	7961	22044	22054	38089	38089					0.11101587025336812
LPRETRPTKK	10	Unmodified	_LPRETRPTKK_					0	0	0		nc|ENSG00000203804|Q5T5F5|ADAMTSL4-AS1	nc|ENSG00000203804|Q5T5F5|ADAMTSL4-AS1	nc|ENSG00000203804|Q5T5F5|ADAMTSL4-AS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.9316101074219	3	409.250695	1224.73025	0.2963	0.00012126	-4.269	-0.0017471	-3.9727	-0.0016258	409.24888400869844	27.935	0.97005	27.838	27.532	28.502	-0.096947					44	22	3	0	0	0	0.37624	1	1712	1712		31.634	5.5709	1	120190			33352	15205	22045	22055	38090	38090					0.12687858962681275
LPREVTAG	8	Unmodified	_LPREVTAG_					0	0	0		ENST00000014914.5_1_12:13043945-13044290:+|nuORF	ENST00000014914.5_1_12:13043945-13044290:+|nuORF	ENST00000014914.5_1_12:13043945-13044290:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.73687744140625	2	421.74016	841.465767	-0.50848	-0.00021444	4.4027	0.0018568	3.8943	0.0016424	421.7421959827543	74.065	0.47587	74.022	73.808	74.284	-0.042984					32	18	2	0	0	0	0.88944	1	7249	7249		57.811	0	1	141780			33353	9068	22046	22056	38091	38091					0.03869229208953584
LPREVTGA	8	Unmodified	_LPREVTGA_					0	0	0			REV__ENST00000401053.8_1_19:58579401-58579854:+|nuORF	REV__ENST00000401053.8_1_19:58579401-58579854:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.7397155761719	2	421.74016	841.465767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.842	1	73.973	73.473	74.473	0.13126								0	0	0	0.30316	1	6808	6808		42.474	0	1		+		33354	26255	22047	22057	38092	38092					0.03869229208953584
LPRFPGNT	8	Unmodified	_LPRFPGNT_					0	0	0			REV__nc|ENSG00000134644|Q14671-4|PUM1	REV__nc|ENSG00000134644|Q14671-4|PUM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.24853515625	2	451.248152	900.481751	0.1709	7.7119E-05	1.52	0.00068589	1.6909	0.00076301	451.24869628583264	62.968	1.2225	63.523	62.907	64.129	0.55449					64	28	3	0	0	0	0.87479	1	6778	6778		30.504	1.3541	1	464750	+		33355	19154	22048	22058	38093	38093					0.027529354458465605
LPRGARRYG	9	Unmodified	_LPRGARRYG_					0	0	0		ENST00000474844.5_1_1:46806455-46806581:+|nuORF	ENST00000474844.5_1_1:46806455-46806581:+|nuORF	ENST00000474844.5_1_1:46806455-46806581:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3046264648438	2	523.304324	1044.5941	0.60955	0.00031898	-1.9732	-0.0010326	-1.3637	-0.00071363	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.78536	1	9981	9981		29.15	1.0681	1	4023800			33356	12313	22049	22059	38094	38094					0.07358209242693192
LPRGIAVKFF	10	Unmodified	_LPRGIAVKFF_					0	0	0		ENST00000546378.1_1_12:54370099-54370336:+|nuORF	ENST00000546378.1_1_12:54370099-54370336:+|nuORF	ENST00000546378.1_1_12:54370099-54370336:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3568115234375	2	574.352951	1146.69135	2.697	0.001549	2.452	0.0014083	5.149	0.0029574	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.86218	1	10882	10882		32.812	2.3088	1	738540			33357	13589	22050	22060	38095	38095					0.12387178398989818
LPRKLKRI	8	Unmodified	_LPRKLKRI_					0	0	0		ENSG00000142185|ENST00000397928|TRPM2;nc|ENSG00000142185|O94759-2|TRPM2	ENSG00000142185|ENST00000397928|TRPM2	ENSG00000142185|ENST00000397928|TRPM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.3606567382812	2	512.361111	1022.70767	-0.36988	-0.00018951	0.50559	0.00025904	0.13571	6.9531E-05	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.81724	1	7258	7258		14.664	4.4793	1	304520			33358	4547	22051	22061	38096	38096					0.1972230435574147
LPRKTSLSSD	10	Unmodified	_LPRKTSLSSD_					0	0	0		ENSG00000143669|ENST00000389793|LYST;nc|ENSG00000143669|Q99698-2|LYST;ENST00000489585.5_1_1:235926109-235996891:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3062744140625	2	552.306395	1102.59824	2.2801	0.0012593	-2.1564	-0.001191	0.1237	6.8322E-05	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.8545	1	9715	9715		36.447	2.2742	1	1797400			33359	4656	22052	22062	38097	38097					0.05104209155092576
LPRKTSLSSD	10	Unmodified	_LPRKTSLSSD_					0	0	0		ENSG00000143669|ENST00000389793|LYST;nc|ENSG00000143669|Q99698-2|LYST;ENST00000489585.5_1_1:235926109-235996891:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3057861328125	2	552.306395	1102.59824	1.2817	0.0007079	-1.3256	-0.00073213	-0.043866	-2.4228E-05	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.64457	1	9703	9703		47.657	1.6851	1	1712700			33360	4656	22052	22062	38098	38098					0.05104209155092576
LPRLFLATT	9	Unmodified	_LPRLFLATT_					0	0	0			REV__ENST00000450554.6_1_19:56185845-56185950:+|nuORF	REV__ENST00000450554.6_1_19:56185845-56185950:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3137817382812	2	516.316035	1030.61752	-0.63969	-0.00033028	-3.0425	-0.0015709	-3.6822	-0.0019012	516.3144152653146	102.55	1.0925	102.55	101.98	103.08	0					67	27	3	0	0	0	0.78058	1	10517	10517		30.504	7.4612	1	640710	+		33361	26869	22053	22063	38099	38099					0.10343210236646883
LPRLFLATT	9	Unmodified	_LPRLFLATT_					0	0	0			REV__ENST00000450554.6_1_19:56185845-56185950:+|nuORF	REV__ENST00000450554.6_1_19:56185845-56185950:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3096923828125	2	516.316035	1030.61752	0.81867	0.00042269	-4.2005	-0.0021688	-3.3818	-0.0017461	516.3139586362336	103.31	1.1027	103.44	102.97	104.08	0.12621					71	27	3	0	0	0	0.7932	1	11012	11012		24.203	2.2429	1	1034200	+		33362	26869	22053	22063	38100	38100					0.10343210236646883
LPRLGPDVCI	10	Carbamidomethyl (C)	_LPRLGPDVC(Carbamidomethyl (C))I_	LPRLGPDVC(1)I		LPRLGPDVC(72)I		0	1	0		ENST00000546567.5_2_12:58158304-58159309:-|nuORF;ENST00000547451.1_1_12:58158414-58159309:-|nuORF;ENST00000228606.8_1_12:58158304-58160873:-|nuORF	ENST00000546567.5_2_12:58158304-58159309:-|nuORF	ENST00000546567.5_2_12:58158304-58159309:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.3141479492188	2	570.315709	1138.61686	0.44856	0.00025582	-3.4415	-0.0019627	-2.9929	-0.0017069	570.3136766172819	37.029	0.4966	37.311	37.093	37.59	0.28173					29	11	3	0	0	0	0.30722	1	2944	2944		71.877	11.947	1	646040			33363	9206	22054	22064	38101	38101	115				0.05310047525290429
LPRLRPRE	8	Unmodified	_LPRLRPRE_					0	0	0		ENST00000254323.6_1_19:13928072-13928740:+|nuORF	ENST00000254323.6_1_19:13928072-13928740:+|nuORF	ENST00000254323.6_1_19:13928072-13928740:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8201904296875	2	518.82235	1035.63015	-0.16117	-8.3619E-05	-3.8556	-0.0020004	-4.0168	-0.002084	518.8201883857264	52.919	1.3295	53.533	52.991	54.321	0.61436					72	31	3	0	0	0	0.91977	2	5365	5340;5365		50.025	5.3793	1	3507900			33364	9320	22055	22065	38102;38103	38103					0.11375666419553454
LPRLRVSV	8	Unmodified	_LPRLRVSV_					0	0	0		ENST00000347934.8_2_10:28822286-28822370:+|nuORF	ENST00000347934.8_2_10:28822286-28822370:+|nuORF	ENST00000347934.8_2_10:28822286-28822370:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.7730712890625	2	470.308544	938.602535	0.67361	0.0003168	-1.5657	-0.00073635	-0.89206	-0.00041954	470.3084957354295	20.927	0.19326	20.911	20.786	20.979	-0.016428					10	8	2	0	0	0	0.4196	1	533	533		8.2313	0	1	44193			33365	10314	22056	22066	38104	38104					0.13077763159321876
LPRLVLHFG	9	Unmodified	_LPRLVLHFG_					0	0	0		ENST00000524741.1_1_8:11640652-11643779:+|nuORF	ENST00000524741.1_1_8:11640652-11643779:+|nuORF	ENST00000524741.1_1_8:11640652-11643779:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3258056640625	2	526.324194	1050.63383	0.4319	0.00022732	1.0062	0.0005296	1.4381	0.00075692	526.3246023064967	56.585	0.86829	56.684	56.541	57.41	0.099186					61	38	2	0	0	0	0.20789	1	4850	4850		12.207	0	1	291280			33366	13224	22057	22067	38105	38105					0.110543361934333
LPRLVLHFG	9	Unmodified	_LPRLVLHFG_					0	0	0		ENST00000524741.1_1_8:11640652-11643779:+|nuORF	ENST00000524741.1_1_8:11640652-11643779:+|nuORF	ENST00000524741.1_1_8:11640652-11643779:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3238525390625	2	526.324194	1050.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.897	1	61.913	61.413	62.413	0.015724								0	0	0	0.33301	1	5386	5386		19.36	5.2229	1				33367	13224	22057	22067	38106	38106					0.110543361934333
LPRNINHLK	9	Unmodified	_LPRNINHLK_					0	0	0			REV__nc|ENSG00000107485|P23771|GATA3	REV__nc|ENSG00000107485|P23771|GATA3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8345947265625	2	552.835457	1103.65636	-0.74602	-0.00041243	-1.6881	-0.00093326	-2.4342	-0.0013457	552.8344221073519	82.073	1.2669	82.073	81.549	82.816	0					61	32	2	0	0	0	0.77546	1	7664	7664		31.955	0	1	174970	+		33368	17659	22058	22068	38107	38107					0.10867935590999878
LPRNYGVS	8	Unmodified	_LPRNYGVS_					0	0	0			REV__ENST00000586487.2_1_18:45396854-45396920:-|nuORF	REV__ENST00000586487.2_1_18:45396854-45396920:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.2483825683594	2	453.245609	904.476666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.853	1	83.853	83.353	84.353	0								0	0	0	0.30125	1	7882	7882		20.482	0	1		+		33369	29103	22059	22069	38108	38108					0.020606315832424116
LPRPHPNG	8	Unmodified	_LPRPHPNG_					0	0	0			REV__ENST00000470779.1_1_1:155028301-155028614:+|nuORF	REV__ENST00000470779.1_1_1:155028301-155028614:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	444.2454528808594	2	444.245944	886.477334	1.4251	0.00063311	-2.0669	-0.00091822	-0.64178	-0.00028511	444.24485409277173	107.1	1.0795	107.21	106.82	107.9	0.10396					105	39	3	0	0	0	0.90465	1	13025	13025		40.573	4.1259	1	6005700	+		33370	27217	22060	22070	38109	38109					0.02955471022949041
LPRPIRLNKK	10	Unmodified	_LPRPIRLNKK_					0	0	0		ENST00000571654.1_1_16:30666672-30667261:+|nuORF;ENST00000567989.1_1_16:30666816-30667629:+|nuORF;ENSG00000156858|ENST00000300835|PRR14	ENST00000571654.1_1_16:30666672-30667261:+|nuORF	ENST00000571654.1_1_16:30666672-30667261:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2691345214844	3	412.275063	1233.80336	-0.13887	-5.7251E-05	-3.7582	-0.0015494	-3.8971	-0.0016067	412.27352756036987	38.011	0.9069	37.953	37.695	38.602	-0.057915					49	28	2	0	0	0	0.37624	1	2297	2297		16.007	12.163	1	150700			33371	5395	22061	22071	38110	38110					0.19581032475980464
LPRPKPAPA	9	Unmodified	_LPRPKPAPA_					0	0	0			REV__ENST00000558018.5_1_15:89442371-89442626:-|nuORF	REV__ENST00000558018.5_1_15:89442371-89442626:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.7930908203125	2	473.795269	945.575986	-1.7003	-0.0008056	-2.367	-0.0011215	-4.0673	-0.0019271	473.7939652736304	88.815	1.2002	88.987	88.577	89.778	0.17233					55	27	3	0	0	0	0.7932	1	8791	8791		23.042	0.0057756	1	249200	+		33372	28726	22062	22072	38111	38111					0.10102074267967964
LPRPLGGC	8	Unmodified	_LPRPLGGC_					0	0	0		ENST00000331483.8_1_17:79801637-79801865:-|nuORF	ENST00000331483.8_1_17:79801637-79801865:-|nuORF	ENST00000331483.8_1_17:79801637-79801865:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7287292480469	2	406.725998	811.437443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.858	1	75.905	75.405	76.405	0.046448								0	0	0	0.30784	1	7395	7395		14.664	0	1				33373	10123	22063	22073	38112	38112					0.024182080280183982
LPRPLGLLLRS	11	Unmodified	_LPRPLGLLLRS_					0	0	0			REV__nc|ENSG00000177398|Q5DID0-3|UMODL1	REV__nc|ENSG00000177398|Q5DID0-3|UMODL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.267578125	3	412.271319	1233.79213	0.10692	4.4082E-05	4.2885	0.001768	4.3954	0.0018121	412.273071261482	39.913	0.97469	39.883	39.401	40.376	-0.03027					50	23	3	0	0	0	0.17758	1	2837	2837		19.627	9.0401	1	86267	+		33374	22200	22064	22074	38113	38113					0.18458210381845674
LPRPLVGE	8	Unmodified	_LPRPLVGE_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.7662353515625	2	440.766178	879.517802	0.12011	5.294E-05	0.38781	0.00017093	0.50792	0.00022387	440.7661237364338	35.556	1.0405	35.565	35.17	36.211	0.0092812					64	22	4	0	0	0	0.88944	1	2238	2238		57.811	0	1	415040	+		33375	29671	22065	22075	38114	38114					0.07322392622711504
LPRPPQPLLY	10	Unmodified	_LPRPPQPLLY_					0	0	0		ENST00000471339.1_1_5:173036657-173043649:-|nuORF	ENST00000471339.1_1_5:173036657-173043649:-|nuORF	ENST00000471339.1_1_5:173036657-173043649:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.3572387695312	2	597.355691	1192.69683	0.89295	0.00053341	3.2215	0.0019244	4.1144	0.0024578	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.85939	1	10403	10403		23.042	2.2053	1	2674200			33376	12238	22066	22076	38115	38115					0.10818857190815834
LPRQAHRVV	9	Unmodified	_LPRQAHRVV_					0	0	0			REV__ENST00000604175.5_1_9:90586022-90589430:-|nuORF;REV__ENST00000603475.1_1_9:90586022-90589145:-|nuORF	REV__ENST00000603475.1_1_9:90586022-90589145:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3262329101562	2	538.327799	1074.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.15	1	114.18	113.68	114.68	0.026466								0	0	0	0.33301	1	12491	12491		19.36	6.4008	1		+		33377	20482;29345	22067	22077	38116	38116					0.1067106879381754
LPRRKKPL	8	Unmodified	_LPRRKKPL_					0	0	0		ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37	ENSG00000135913|ENST00000258399|USP37	ENSG00000135913|ENST00000258399|USP37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.34539794921875	2	504.345461	1006.67637	0.37851	0.0001909	-0.71644	-0.00036133	-0.33793	-0.00017043	504.3450503233635	54.756	1.9259	55.325	53.982	55.908	0.56836					89	45	3	0	0	0	0.86791	1	5559	5559		28.254	0	1	1764400			33378	4064	22068	22078	38117	38117					0.17329731321649433
LPRRRPLAAS	10	Unmodified	_LPRRRPLAAS_					0	0	0		ENST00000361729.2_1_1:23857363-23857516:-|nuORF	ENST00000361729.2_1_1:23857363-23857516:-|nuORF	ENST00000361729.2_1_1:23857363-23857516:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8543701171875	2	568.854181	1135.69381	-0.36185	-0.00020584	-1.2386	-0.0007046	-1.6005	-0.00091044	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.86218	1	10683	10683		32.812	7.2384	1	34546000			33379	10490	22069	22079	38118	38118					0.13139026856629243
LPRRSLSE	8	Unmodified	_LPRRSLSE_					0	0	0			REV__nc|ENSG00000100842|O43281-3|EFS	REV__nc|ENSG00000100842|O43281-3|EFS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2780456542969	2	479.277441	956.540328	-0.097427	-4.6695E-05	0.75887	0.00036371	0.66144	0.00031701	479.2777564513445	97.555	2.08	97.612	96.988	99.068	0.056831					95	47	3	0	0	0	0.90983	1	10273	10273		42.396	5.237	1	964120	+		33380	29740	22070	22080	38119	38119					0.060319920203255606
LPRRSLSE	8	Unmodified	_LPRRSLSE_					0	0	0			REV__nc|ENSG00000100842|O43281-3|EFS	REV__nc|ENSG00000100842|O43281-3|EFS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2776184082031	2	479.277441	956.540328	-0.45441	-0.00021779	0.95209	0.00045632	0.49769	0.00023853	479.2777888563568	97.247	1.3159	97.295	96.739	98.055	0.048157					88	30	4	0	0	0	0.88185	2	10364	10364;10376		32.812	3.6629	1	962360	+		33381	29740	22070	22080	38120;38121	38120					0.060319920203255606
LPRRSLSE	8	Unmodified	_LPRRSLSE_					0	0	0			REV__nc|ENSG00000100842|O43281-3|EFS	REV__nc|ENSG00000100842|O43281-3|EFS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2781982421875	2	479.277441	956.540328	-1.6825	-0.00080636	2.3683	0.0011351	0.68584	0.00032871	479.27847474048673	97.333	1.1091	97.535	97.052	98.161	0.20206					56	25	3	0	0	0	0.84341	2	10001	10001;10013		39.253	7.298	1	515040	+		33382	29740	22070	22080	38122;38123	38122					0.060319920203255606
LPRSVGPR	8	Unmodified	_LPRSVGPR_					0	0	0			REV__ENSG00000196872|ENST00000397899|CRACDL	REV__ENSG00000196872|ENST00000397899|CRACDL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.2671813964844	2	441.269419	880.524284	-1.411	-0.00062263	0.47067	0.00020769	-0.94033	-0.00041494	441.2699639025588	99.08	1.9047	99.303	98.475	100.38	0.22262					53	44	2	0	0	0	0.85277	1	10298	10298		25.45	1.2474	1	324250	+		33383	23177	22071	22081	38124	38124					0.07924330574087435
LPRSVGPR	8	Unmodified	_LPRSVGPR_					0	0	0			REV__ENSG00000196872|ENST00000397899|CRACDL	REV__ENSG00000196872|ENST00000397899|CRACDL	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	441.269419	880.524284	-1.0116	-0.00044638	1.0865	0.00047942	0.074881	3.3043E-05	441.26987438803286	99.496	1.8795	99.496	98.849	100.73	0	0.15311	0.0016254	NaN	25.45	51	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	276430	+		33384	23177	22071	22081							0.07924330574087435
LPRSVGPR	8	Unmodified	_LPRSVGPR_					0	0	0			REV__ENSG00000196872|ENST00000397899|CRACDL	REV__ENSG00000196872|ENST00000397899|CRACDL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	441.269419	880.524284	-0.15456	-6.82E-05	0.20211	8.9184E-05	0.047553	2.0984E-05	441.26947802880113	99.498	1.7477	99.539	98.786	100.53	0.0411	0.19535	0.00084488	NaN	25.45	53	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	262920	+		33385	23177	22071	22081							0.07924330574087435
LPRSVGPR	8	Unmodified	_LPRSVGPR_					0	0	0			REV__ENSG00000196872|ENST00000397899|CRACDL	REV__ENSG00000196872|ENST00000397899|CRACDL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	441.269419	880.524284	2.4008	0.0010594	-2.3058	-0.0010175	0.094983	4.1913E-05	441.2683854278167	99.238	1.8413	99.184	98.601	100.44	-0.053741	-0.15928	-0.0013685	NaN	25.45	49	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	277840	+		33386	23177	22071	22081							0.07924330574087435
LPRSVGPR	8	Unmodified	_LPRSVGPR_					0	0	0			REV__ENSG00000196872|ENST00000397899|CRACDL	REV__ENSG00000196872|ENST00000397899|CRACDL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	441.269419	880.524284	1.8865	0.00083247	-1.8962	-0.00083675	-0.0096861	-4.2742E-06	441.268551851608	99.147	2.1524	99.195	98.187	100.34	0.047523	-0.14838	-0.001007	NaN	25.45	59	49	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	380740	+		33387	23177	22071	22081							0.07924330574087435
LPRSVGPR	8	Unmodified	_LPRSVGPR_					0	0	0			REV__ENSG00000196872|ENST00000397899|CRACDL	REV__ENSG00000196872|ENST00000397899|CRACDL	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	441.269419	880.524284	-1.411	-0.00062263	0.47067	0.00020769	-0.94033	-0.00041494	441.2699639025588	99.08	1.9047	99.303	98.475	100.38	0.22262	-0.040806	0.0010819	NaN	25.45	53	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	324250	+		33388	23177	22071	22081							0.07924330574087435
LPRTDYSF	8	Unmodified	_LPRTDYSF_					0	0	0		ENSG00000231389|ENST00000419277|HLA-DPA1;ENST00000479107.1_1_6:33036772-33037066:-|nuORF	ENSG00000231389|ENST00000419277|HLA-DPA1	ENSG00000231389|ENST00000419277|HLA-DPA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.749755859375	2	499.750724	997.486896	-0.63167	-0.00031568	0.1403	7.0117E-05	-0.49137	-0.00024556	499.75072519344366	51.759	0.62838	52.194	51.864	52.492	0.43505					36	14	4	0	0	0	0.72312	2	5148	5148;5160		66.429	3.123	1	2676800			33389	8734	22072	22082	38125;38126	38125					-0.011948054821914411
LPRTILQVVAR	11	Unmodified	_LPRTILQVVAR_					0	0	0		nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4;ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-2|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.6985168457031	3	422.60659	1264.79794	-0.1815	-7.6701E-05	-2.269	-0.00095891	-2.4505	-0.0010356	422.6052031928465	58.415	0.14823	58.401	58.318	58.466	-0.013641					5	4	2	0	0	0	0.17955	1	5311	5311		8.7993	0	1	15990			33390	8020	22073	22083	38127	38127					0.17613308893510293
LPRTKNMETN	10	Unmodified	_LPRTKNMETN_					0	0	0			REV__ENST00000560341.2_1_15:40348684-40349006:+|nuORF	REV__ENST00000560341.2_1_15:40348684-40349006:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.8772277832031	3	401.876529	1202.60776	1.1314	0.0004547	1.5862	0.00063747	2.7177	0.0010922	401.87682841630664	52.018	0.61638	52.442	52.021	52.638	0.42348					28	14	3	0	0	0	0.86621	1	5197	5197		26.063	0	1	1250400	+		33391	28758	22074	22084	38128	38128					0.014556541689671576
LPRVNQFWYKY	11	Unmodified	_LPRVNQFWYKY_					0	0	0		ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1	ENSG00000101343|ENST00000536226|CRNKL1	ENSG00000101343|ENST00000536226|CRNKL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.27001953125	3	505.269866	1512.78777	-0.87785	-0.00044355	4.1455	0.0020946	3.2677	0.0016511	505.2719294972262	45.762	0.76646	46.233	45.888	46.654	0.47139					56	18	5	0	0	0	0.76579	1	4293	4293		18.531	2.6104	1	4155400			33392	1933	22075	22085	38129	38129					0.05188701168276566
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.380859375	2	627.382437	1252.75032	-0.21836	-0.00013699	0.10283	6.4512E-05	-0.11553	-7.2481E-05	627.382511862194	112.54	0.45316	112.48	112.28	112.73	-0.063889					31	15	4	0	0	0	0.7342	1	12227	12227		25.574	0	1	464930	+		33393	16399	22076	22086	38130	38130					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3841552734375	2	627.382437	1252.75032	-0.21917	-0.0001375	0.84427	0.00052968	0.6251	0.00039218	627.3827536710313	113.14	0.55793	113.07	112.73	113.28	-0.067215					52	23	3	0	0	0	0.65746	2	12276	12255;12276		37.812	4.9991	1	140420	+		33394	16399	22076	22086	38131;38132	38132					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3829956054688	2	627.382437	1252.75032	-0.21902	-0.00013741	0.20475	0.00012846	-0.01427	-8.9526E-06	627.3824199275489	117.28	0.27765	117.21	117	117.28	-0.075302					26	9	4	0	0	0	0.6921	1	12565	12565		32.812	6.1195	1	4893700	+		33395	16399	22076	22086	38133	38133					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3847045898438	2	627.382437	1252.75032	-0.21854	-0.00013711	0.33099	0.00020765	0.11244	7.0546E-05	627.3824987700403	117.62	0.3381	117.55	117.34	117.68	-0.07531					36	11	4	0	0	0	0.7342	1	12634	12634		25.574	0	1	1514200	+		33396	16399	22076	22086	38134	38134					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3850708007812	2	627.382437	1252.75032	-0.21918	-0.00013751	0.64139	0.0004024	0.42221	0.00026489	627.382569161749	117.84	0.45222	117.77	117.68	118.13	-0.07531					39	17	3	0	0	0	0.70737	2	12674	12674;12681		30.318	7.7381	1	1073400	+		33397	16399	22076	22086	38135;38136	38135					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3848266601562	2	627.382437	1252.75032	-0.21901	-0.00013741	0.4198	0.00026338	0.20079	0.00012597	627.38251010406	118.49	0.49898	118.41	118.19	118.69	-0.07531					43	18	3	0	0	0	0.66929	4	12701	12694;12701;12725;12733		36.447	10.873	1	1699700	+		33398	16399	22076	22086	38137;38138;38139;38140	38138					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3860473632812	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.61369	22	12913	12359;12407;12476;12554;12658;12666;12704;12721;12731;12766;12792;12820;12863;12874;12886;12913;12955;12987;13008;13021;13043;13138		42.864	8.3578	1	19815000	+		33399	16399	22076	22086	38141;38142;38143;38144;38145;38146;38147;38148;38149;38150;38151;38152;38153;38154;38155;38156;38157;38158;38159;38160;38161;38162	38156					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3836669921875	2	627.382437	1252.75032	1.3875	0.00087048	-1.3709	-0.00086006	0.016609	1.042E-05	627.381312199831	110.83	0.71429	110.95	110.77	111.48	0.11659					73	29	3	0	0	0	0.66929	2	11936	11936;11941		36.447	4.5832	1	205530	+		33400	16399	22076	22086	38163;38164	38163					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3826293945312	2	627.382437	1252.75032	1.3884	0.00087108	-1.8152	-0.0011388	-0.42679	-0.00026776	627.3810650235214	111.67	0.61607	111.78	111.48	112.09	0.11118					52	18	4	0	0	0	0.6921	1	12036	12036		32.812	0	1	62529000	+		33401	16399	22076	22086	38165	38165					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3826293945312	2	627.382437	1252.75032	1.3883	0.00087098	-1.7808	-0.0011173	-0.39257	-0.00024629	627.3811393436591	112.19	0.42046	112.3	112.06	112.48	0.10638					48	15	4	0	0	0	0.6921	1	12100	12100		32.812	3.6424	1	25719000	+		33402	16399	22076	22086	38166	38166					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.383544921875	2	627.382437	1252.75032	1.3877	0.00087063	-1.2444	-0.00078069	0.14335	8.9935E-05	627.3815089822419	119	0.20064	119.09	119.04	119.24	0.087753					17	7	3	0	0	0	0.65746	3	12528	12528;12535;12543		37.812	1.3648	1	3324100	+		33403	16399	22076	22086	38167;38168;38169	38167					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3817749023438	2	627.382437	1252.75032	0.9271	0.00058164	-0.91787	-0.00057585	0.0092291	5.7902E-06	627.3816040296016	111.26	0.49553	111.33	110.97	111.47	0.069542					53	19	3	0	0	0	0.6921	1	11961	11961		32.812	3.6629	1	2019600	+		33404	16399	22076	22086	38170	38170					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3821411132812	2	627.382437	1252.75032	0.92716	0.00058169	-1.2273	-0.00076996	-0.30009	-0.00018827	627.3814833817243	111.89	0.64575	111.96	111.47	112.12	0.069542					69	19	4	0	0	0	0.67778	2	12037	12037;12066		35.152	7.2698	1	15643000	+		33405	16399	22076	22086	38171;38172	38171					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3819580078125	2	627.382437	1252.75032	-1.2002	-0.000753	1.3364	0.00083845	0.1362	8.5448E-05	627.3830182520044	111.13	0.69723	111.12	110.53	111.23	-0.0074387					64	27	3	0	0	0	0.7434	1	11832	11832		23.523	0.94304	1	327620	+		33406	16399	22076	22086	38173	38173					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.384765625	2	627.382437	1252.75032	-1.2001	-0.00075294	0.60915	0.00038217	-0.59097	-0.00037077	627.3827611804128	112.09	1.416	112.07	111.56	112.98	-0.01989					130	45	4	0	0	0	0.6921	5	11950	11923;11950;11976;11995;12017		32.812	6.1216	1	42384000	+		33407	16399	22076	22086	38174;38175;38176;38177;38178	38175					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3815307617188	2	627.382437	1252.75032	2.3057	0.0014466	-2.6415	-0.0016572	-0.33579	-0.00021067	627.3803631374124	110.82	0.68079	110.87	110.56	111.24	0.054062					56	23	3	0	0	0	0.67778	2	13408	13408;13423		35.152	3.6222	1	353100	+		33408	16399	22076	22086	38179;38180	38179					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3834838867188	2	627.382437	1252.75032	2.3056	0.0014465	-2.8861	-0.0018107	-0.58047	-0.00036418	627.3803712370747	111.61	0.69481	111.65	111.16	111.85	0.041832					78	24	4	0	0	0	0.6921	2	13515	13515;13521		32.812	3.6424	1	19059000	+		33409	16399	22076	22086	38181;38182	38181					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3831787109375	2	627.382437	1252.75032	2.3057	0.0014465	-2.4915	-0.0015632	-0.18588	-0.00011662	627.3805851033305	111.94	0.21839	111.98	111.85	112.07	0.04184					23	6	4	0	0	0	0.70737	1	13534	13534		30.318	2.4355	1	1122300	+		33410	16399	22076	22086	38183	38183					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3834838867188	2	627.382437	1252.75032	2.3056	0.0014465	-2.3879	-0.0014981	-0.082244	-5.1598E-05	627.3806379935313	112.21	0.77449	112.24	112.06	112.83	0.030594					92	29	4	0	0	0	0.6921	1	13573	13573		32.812	7.2384	1	15506000	+		33411	16399	22076	22086	38184	38184					0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	627.382437	1252.75032	1.3877	0.00087063	-1.2444	-0.00078069	0.14335	8.9935E-05	627.3815089822419	119	0.20064	119.09	119.04	119.24	0.087753	-0.014673	-0.00042168	NaN	37.812	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3324100	+		33412	16399	22076	22086							0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	627.382437	1252.75032	2.3057	0.0014465	-2.4915	-0.0015632	-0.18588	-0.00011662	627.3805851033305	111.94	0.21839	111.98	111.85	112.07	0.04184	0.066271	0.0033413	NaN	30.318	23	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1122300	+		33413	16399	22076	22086							0.1340560990265658
LPRVQIVDVKS	11	Unmodified	_LPRVQIVDVKS_					0	0	0			REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	REV__ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	627.382437	1252.75032	6.5843	0.0041309	-6.1899	-0.0038835	0.39433	0.0002474	627.3785206095984	117.88	0.78392	117.8	117.55	118.33	-0.077652	0.01631	-0.0040712	NaN	30.318	52	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44020	+		33414	16399	22076	22086							0.1340560990265658
LPRVTEHLP	9	Unmodified	_LPRVTEHLP_					0	0	0		ENST00000604566.1_1_1:3644156-3648116:+|nuORF;nc|ENSG00000078900|O15350-10|TP73;nc|ENSG00000078900|O15350-3|TP73	ENST00000604566.1_1_1:3644156-3648116:+|nuORF	ENST00000604566.1_1_1:3644156-3648116:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.30908203125	2	531.308741	1060.60293	0.10067	5.3487E-05	-0.038657	-2.0539E-05	0.062014	3.2948E-05	531.3084544257347	37.315	0.78786	37.291	36.949	37.737	-0.023975					33	17	3	0	0	0	0.76255	1	2448	2448		35.618	0	1	132470			33415	14431	22077	22087	38185	38185					0.07505138088504282
LPRWVKADLL	10	Unmodified	_LPRWVKADLL_					0	0	0			REV__ENST00000482853.5_1_6:41001618-41002768:-|nuORF	REV__ENST00000482853.5_1_6:41001618-41002768:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.8728637695312	2	605.868966	1209.72338	2.1175	0.0012829	3.5745	0.0021657	5.692	0.0034486	605.8709120957792	99.886	1.4328	100.22	99.77	101.2	0.33295					98	35	4	0	0	0	0.86348	1	12122	12122		31.53	1.2121	1	1222300	+		33416	18599	22078	22088	38186	38186					0.12690546082126275
LPRYVGVVVAH	11	Unmodified	_LPRYVGVVVAH_					0	0	0			REV__ENSG00000188573|ENST00000338333|FBLL1	REV__ENSG00000188573|ENST00000338333|FBLL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.91015625	3	403.908269	1208.70298	1.4026	0.00056654	3.6025	0.0014551	5.0051	0.0020216	403.9097044639606	65.998	1.3411	66.384	65.959	67.3	0.38582					64	35	2	0	0	0	0.69931	1	7225	7225		31.634	5.5709	1	273570	+		33417	23013	22079	22089	38187	38187					0.10697375422341793
LPRYVGVVVAH	11	Unmodified	_LPRYVGVVVAH_					0	0	0			REV__ENSG00000188573|ENST00000338333|FBLL1	REV__ENSG00000188573|ENST00000338333|FBLL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9103698730469	3	403.908269	1208.70298	1.6372	0.00066129	3.0727	0.0012411	4.71	0.0019024	403.90940390905183	68.69	2.5103	69.075	67.299	69.809	0.38482					145	63	3	0	0	0	0.52654	1	7530	7530		50.034	17.283	1	351280	+		33418	23013	22079	22089	38188	38188					0.10697375422341793
LPRYVGVVVAH	11	Unmodified	_LPRYVGVVVAH_					0	0	0			REV__ENSG00000188573|ENST00000338333|FBLL1	REV__ENSG00000188573|ENST00000338333|FBLL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	403.908269	1208.70298	-1.8493	-0.00074694	5.0735	0.0020492	3.2242	0.0013023	404.2441155631189	69.014	0.50649	69.149	68.992	69.498	0.13522	-0.036866	0.0022643	NaN	50.034	35	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119470	+		33419	23013	22079	22089							0.10697375422341793
LPRYVGVVVAH	11	Unmodified	_LPRYVGVVVAH_					0	0	0			REV__ENSG00000188573|ENST00000338333|FBLL1	REV__ENSG00000188573|ENST00000338333|FBLL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	403.908269	1208.70298	0.44776	0.00018086	2.6833	0.0010838	3.131	0.0012646	404.24312327550956	68.981	0.87621	69.11	68.65	69.526	0.12838	-0.076544	-0.00063196	NaN	50.034	57	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99311	+		33420	23013	22079	22089							0.10697375422341793
LPRYVGVVVAH	11	Unmodified	_LPRYVGVVVAH_					0	0	0			REV__ENSG00000188573|ENST00000338333|FBLL1	REV__ENSG00000188573|ENST00000338333|FBLL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	403.908269	1208.70298	-1.2657	-0.00051125	4.4828	0.0018106	3.2171	0.0012994	404.24402909982393	69.345	0.59496	69.411	69.035	69.63	0.065506	0.22449	0.0015486	NaN	50.034	41	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63391	+		33421	23013	22079	22089							0.10697375422341793
LPSAFEEKAI	10	Unmodified	_LPSAFEEKAI_					0	0	0		ENSG00000123159|ENST00000393033|GIPC1;ENST00000585606.5_1_19:14589230-14590349:-|nuORF;nc|ENSG00000123159|O14908-2|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.7994384765625	2	552.800414	1103.58628	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.21	1	76.3	75.8	76.8	0.089363								0	0	0	0.45132	1	7091	7091		39.253	6.4404	1				33422	3263	22080	22090	38189	38189					0.03862592411906007
LPSATETDPVL	11	Unmodified	_LPSATETDPVL_					0	0	0			REV__ENST00000325954.8_2_12:120972163-120972457:+|nuORF	REV__ENST00000325954.8_2_12:120972163-120972457:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	571.8014526367188	2	571.800611	1141.58667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.08	1	119.08	118.58	119.58	0								0	0	0	0.56276	1	12096	12096		14.865	0	1		+		33423	25069	22081	22091	38190	38190					0.02153967341087082
LPSEIEVKY	9	Unmodified	_LPSEIEVKY_					0	0	0		ENST00000464697.1_1_12:110825679-110841468:-|nuORF;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7;ENSG00000196510|ENST00000455511|ANAPC7	ENST00000464697.1_1_12:110825679-110841468:-|nuORF	ENST00000464697.1_1_12:110825679-110841468:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.2904052734375	2	539.294965	1076.57538	-0.42346	-0.00022837	0.78855	0.00042526	0.36509	0.00019689	539.2952883763808	56.046	0.87471	56.447	56.115	56.989	0.40101					49	22	3	0	0	0	0.12688	2	5787	5779;5787		87.696	16.373	1	3235800			33424	8066	22082	22092	38191;38192	38192					0.04015190037625871
LPSEIEVKY	9	Unmodified	_LPSEIEVKY_					0	0	0		ENST00000464697.1_1_12:110825679-110841468:-|nuORF;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7;ENSG00000196510|ENST00000455511|ANAPC7	ENST00000464697.1_1_12:110825679-110841468:-|nuORF	ENST00000464697.1_1_12:110825679-110841468:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.2901000976562	2	539.294965	1076.57538	-0.027521	-1.4842E-05	0.51465	0.00027755	0.48713	0.0002627	539.2951054717984	55.884	0.94689	56.443	56.107	57.054	0.55954					49	23	3	0	0	0	0.14236	2	5776	5776;5782		85.161	19.358	1	3278600			33425	8066	22082	22092	38193;38194	38193					0.04015190037625871
LPSETPLLL	9	Unmodified	_LPSETPLLL_					0	0	0			REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79571533203125	2	491.794601	981.574648	0.09879	4.8585E-05	2.3098	0.001136	2.4086	0.0011846	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.78536	1	4015	4015		29.15	3.6994	1	1349600	+		33426	27525	22083	22093	38195	38195					0.08312395388577443
LPSETPLLL	9	Unmodified	_LPSETPLLL_					0	0	0			REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.29986572265625	2	491.794601	981.574648	0.13478	6.6286E-05	1.7464	0.00085886	1.8812	0.00092515	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.78058	1	5469	5469		30.504	3.8107	1	176030	+		33427	27525	22083	22093	38196	38196					0.08312395388577443
LPSETPLLL	9	Unmodified	_LPSETPLLL_					0	0	0			REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7960205078125	2	491.794601	981.574648	-0.70147	-0.00034498	3.2327	0.0015898	2.5312	0.0012448	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.7932	1	4611	4611		24.203	4.206	1	1759500	+		33428	27525	22083	22093	38197	38197					0.08312395388577443
LPSETPLLL	9	Unmodified	_LPSETPLLL_					0	0	0			REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956848144531	2	491.794601	981.574648	0.30701	0.00015099	1.9707	0.0009692	2.2778	0.0011202	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.77546	1	3397	3397		31.955	0	1	3201400	+		33429	27525	22083	22093	38198	38198					0.08312395388577443
LPSETPLLL	9	Unmodified	_LPSETPLLL_					0	0	0			REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7955627441406	2	491.794601	981.574648	-0.17405	-8.5598E-05	2.4406	0.0012003	2.2666	0.0011147	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.69914	1	3413	3413		40.573	8.6178	1	2994900	+		33430	27525	22083	22093	38199	38199					0.08312395388577443
LPSETPLLL	9	Unmodified	_LPSETPLLL_					0	0	0			REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	REV__ENST00000485448.1_1_19:40872390-40872810:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79541015625	2	491.794601	981.574648	-1.0095	-0.00049646	2.6526	0.0013046	1.6432	0.00080809	491.79577391563464	44.834	1.3425	45.297	44.375	45.717	0.46313					102	32	4	0	0	0	0.7932	1	4120	4120		24.203	1.1603	1	7709100	+		33431	27525	22083	22093	38200	38200					0.08312395388577443
LPSGKPSSP	9	Unmodified	_LPSGKPSSP_					0	0	0		ENSG00000049283|ENST00000268933|EPN3;ENST00000512379.5_1_17:48610205-48619515:+|nuORF	ENSG00000049283|ENST00000268933|EPN3	ENSG00000049283|ENST00000268933|EPN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.23681640625	2	435.239993	868.465432	-1.6534	-0.00071961	2.2013	0.0009581	0.54795	0.00023849	435.240689021295	28.601	0.50809	28.67	28.42	28.928	0.06868					58	25	4	0	0	0	0.41566	1	1182	1182		56.721	14.247	1	211980			33432	984	22084	22094	38201	38201					0.025938094890989305
LPSGKPSSP	9	Unmodified	_LPSGKPSSP_					0	0	0		ENSG00000049283|ENST00000268933|EPN3;ENST00000512379.5_1_17:48610205-48619515:+|nuORF	ENSG00000049283|ENST00000268933|EPN3	ENSG00000049283|ENST00000268933|EPN3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	435.239993	868.465432	-2.0474	-0.00089113	2.4029	0.0010459	0.3555	0.00015473	435.24093935347935	28.618	0.4577	28.618	28.394	28.851	0	0.046295	0.0016834	NaN	56.721	32	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41971			33433	984	22084	22094							0.025938094890989305
LPSGKPSSP	9	Unmodified	_LPSGKPSSP_					0	0	0		ENSG00000049283|ENST00000268933|EPN3;ENST00000512379.5_1_17:48610205-48619515:+|nuORF	ENSG00000049283|ENST00000268933|EPN3	ENSG00000049283|ENST00000268933|EPN3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	435.239993	868.465432	0.31091	0.00013532	0.15221	6.6247E-05	0.46312	0.00020157	435.23984280420814	28.526	0.64434	28.562	28.255	28.9	0.03607	-0.0093576	-0.0002758	NaN	56.721	47	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112260			33434	984	22084	22094							0.025938094890989305
LPSGKPSSP	9	Unmodified	_LPSGKPSSP_					0	0	0		ENSG00000049283|ENST00000268933|EPN3;ENST00000512379.5_1_17:48610205-48619515:+|nuORF	ENSG00000049283|ENST00000268933|EPN3	ENSG00000049283|ENST00000268933|EPN3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	435.239993	868.465432	-0.34746	-0.00015123	0.85504	0.00037215	0.50757	0.00022092	435.24020038708596	28.5	0.8814	28.46	28.022	28.904	-0.039907	-0.11125	0.000336	NaN	56.721	47	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134740			33435	984	22084	22094							0.025938094890989305
LPSGKPSSP	9	Unmodified	_LPSGKPSSP_					0	0	0		ENSG00000049283|ENST00000268933|EPN3;ENST00000512379.5_1_17:48610205-48619515:+|nuORF	ENSG00000049283|ENST00000268933|EPN3	ENSG00000049283|ENST00000268933|EPN3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	435.239993	868.465432	-0.93254	-0.00040588	1.0822	0.000471	0.14963	6.5125E-05	435.2407227862871	28.766	0.79065	28.737	28.293	29.084	-0.029207	0.16572	0.00053372	NaN	56.721	33	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130260			33436	984	22084	22094							0.025938094890989305
LPSGLIALV	9	Unmodified	_LPSGLIALV_					0	0	0		ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78839111328125	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.7932	1	2661	2661		19.36	1.0356	1	15753000			33437	14442	22085	22095	38202	38202					0.11308733942314575
LPSGLIALV	9	Unmodified	_LPSGLIALV_					0	0	0		ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7882385253906	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.72402	1	3452	3452		38.806	8.3025	1	493390			33438	14442	22085	22095	38203	38203					0.11308733942314575
LPSGLIALV	9	Unmodified	_LPSGLIALV_					0	0	0		ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7876892089844	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.7932	1	3238	3238		19.36	5.5846	1	448230			33439	14442	22085	22095	38204	38204					0.11308733942314575
LPSGLIALV	9	Unmodified	_LPSGLIALV_					0	0	0		ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	ENST00000606070.1_1_6:108279748-108280261:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.78851318359375	2	441.786579	881.558604	-1.1834	-0.00052282	2.9635	0.0013093	1.7801	0.00078643	441.78771241232647	40.14	0.99562	40.729	39.913	40.908	0.58915					63	23	3	0	0	0	0.7932	1	3334	3334		18.324	0.95945	1	2890500			33440	14442	22085	22095	38205	38205					0.11308733942314575
LPSGLIIVA	9	Unmodified	_LPSGLIIVA_					0	0	0			REV__ENST00000598118.1_1_19:35506495-35517042:+|nuORF	REV__ENST00000598118.1_1_19:35506495-35517042:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7879943847656	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.7932	1	3163	3163		25.45	0	1	54520000	+		33441	29279	22086	22096	38206	38206					0.11308733942325944
LPSGPAPAP	9	Unmodified	_LPSGPAPAP_					0	0	0			REV__ENST00000390556.6_1_14:106303253-106303379:-|nuORF	REV__ENST00000390556.6_1_14:106303253-106303379:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.7240905761719	2	403.723978	805.433404	-1.8572	-0.00074981	2.1457	0.00086627	0.28846	0.00011646	403.7247227583041	64.772	1.8283	64.897	63.712	65.54	0.12545					133	73	3	0	0	0	0.58151	1	5692	5692		47.916	1.9636	1	1035700	+		33442	26000	22087	22097	38207	38207					0.022904418059397358
LPSIKYSFPSQ	11	Unmodified	_LPSIKYSFPSQ_					0	0	0		ENST00000361488.7_1_8:58955845-59058627:+|nuORF	ENST00000361488.7_1_8:58955845-59058627:+|nuORF	ENST00000361488.7_1_8:58955845-59058627:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5928649902344	3	422.895806	1265.66559	-0.11298	-4.778E-05	2.0352	0.00086067	1.9222	0.00081289	423.2310862140206	53.194	0.6581	53.191	52.899	53.557	-0.0032997					29	17	3	0	0	0	0.17302	1	4646	4646		26.75	0	1	59012			33443	10478	22088	22098	38208	38208					0.04338239366052221
LPSIVITLA	9	Unmodified	_LPSIVITLA_					0	0	0		ENST00000568469.5_1_16:19049201-19056398:+|nuORF;nc|ENSG00000170537|Q7Z402-2|TMC7;ENSG00000170537|ENST00000304381|TMC7	ENST00000568469.5_1_16:19049201-19056398:+|nuORF	ENST00000568469.5_1_16:19049201-19056398:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.7997131347656	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.74721	1	2937	2937		37.159	5.2042	1	942760			33444	6599	22089	22099	38209	38209					0.119050031137931
LPSKKSLHL	9	Unmodified	_LPSKKSLHL_					0	0	0		L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|78|2|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|78|2|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|78|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.820556640625	2	511.821484	1021.62842	0.52242	0.00026739	-2.1904	-0.0011211	-1.668	-0.00085369	511.8202077464212	82.213	1.1329	82.686	82.162	83.295	0.47383					61	27	3	0	0	0	0.78983	1	9542	9542		27.882	0	1	1651700			33445	14553	22090	22100	38210	38210					0.11846612610952434
LPSLISSRIYV	11	Unmodified	_LPSLISSRIYV_					0	0	0		ENST00000492643.5_1_1:151339689-151341653:-|nuORF;ENST00000455839.5_1_1:151339298-151341653:-|nuORF;ENST00000474352.5_1_1:151338696-151341653:-|nuORF;nc|ENSG00000143416|Q13228-2|SELENBP1;ENSG00000143416|ENST00000368868|SELENBP1;nc|ENSG00000143416|Q13228-4|SELENBP1	ENST00000492643.5_1_1:151339689-151341653:-|nuORF	ENST00000492643.5_1_1:151339689-151341653:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	625.3693237304688	2	624.371538	1246.72852	1.3418	0.00083777	-1.777	-0.0011095	-0.43518	-0.00027171	624.3704660330867	102.9	0.67404	103.08	102.76	103.43	0.18298					30	16	2	0	0	0	0.17318	1	10838	10838		25.574	3.6142	1	3679200			33446	4628	22091	22101	38211	38211					0.11502805154077578
LPSLLEELL	9	Unmodified	_LPSLLEELL_					0	0	0			REV__nc|ENSG00000181652|Q674R7-2|ATG9B	REV__nc|ENSG00000181652|Q674R7-2|ATG9B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.8088989257812	2	513.807708	1025.60086	-0.65666	-0.0003374	2.9092	0.0014948	2.2525	0.0011574	513.8090545546751	47.78	2.1477	48.249	47.733	49.881	0.46941					113	53	4	0	0	0	0.76996	1	4596	4596		33.516	0	1	3097000	+		33447	22471	22092	22102	38212	38212					0.08908664560067336
LPSLLLPSA	9	Unmodified	_LPSLLLPSA_					0	0	0		ENST00000476487.5_1_5:177651591-177651855:-|nuORF	ENST00000476487.5_1_5:177651591-177651855:-|nuORF	ENST00000476487.5_1_5:177651591-177651855:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.7848205566406	2	455.784036	909.553519	-1.2569	-0.00057288	2.8694	0.0013078	1.6125	0.00073494	455.78522720735987	43.749	1.8731	43.758	43.065	44.938	0.0084534					75	44	2	0	0	0	0.7932	1	3042	3042		20.947	1.587	1	212800			33448	12339	22093	22103	38213	38213					0.0951243007971243
LPSLLLPSA	9	Unmodified	_LPSLLLPSA_					0	0	0		ENST00000476487.5_1_5:177651591-177651855:-|nuORF	ENST00000476487.5_1_5:177651591-177651855:-|nuORF	ENST00000476487.5_1_5:177651591-177651855:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.78448486328125	2	455.784036	909.553519	-0.1802	-8.2133E-05	1.6797	0.00076557	1.4995	0.00068343	455.7846366221301	43.666	1.1994	43.616	42.896	44.095	-0.050308					47	28	2	0	0	0	0.7932	1	3050	3050		23.042	4.7181	1	227320			33449	12339	22093	22103	38214	38214					0.0951243007971243
LPSLLLPSA	9	Unmodified	_LPSLLLPSA_					0	0	0		ENST00000476487.5_1_5:177651591-177651855:-|nuORF	ENST00000476487.5_1_5:177651591-177651855:-|nuORF	ENST00000476487.5_1_5:177651591-177651855:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.785888671875	2	455.784036	909.553519	-2.4291	-0.0011071	3.9811	0.0018145	1.552	0.00070738	455.7856610041375	42.193	1.6759	42.607	41.973	43.649	0.4139					65	41	2	0	0	0	0.76255	2	3746	3735;3746		35.618	4.7181	1	3100600			33450	12339	22093	22103	38215;38216	38216					0.0951243007971243
LPSLLLPSA	9	Unmodified	_LPSLLLPSA_					0	0	0		ENST00000476487.5_1_5:177651591-177651855:-|nuORF	ENST00000476487.5_1_5:177651591-177651855:-|nuORF	ENST00000476487.5_1_5:177651591-177651855:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	455.784036	909.553519	-0.71694	-0.00032677	2.8971	0.0013204	2.1801	0.00099367	455.78507514243915	42.539	0.60894	42.539	42.242	42.851	0.00016785	-0.060682	-0.00070328	NaN	35.618	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43016			33451	12339	22093	22103							0.0951243007971243
LPSLLLPSA	9	Unmodified	_LPSLLLPSA_					0	0	0		ENST00000476487.5_1_5:177651591-177651855:-|nuORF	ENST00000476487.5_1_5:177651591-177651855:-|nuORF	ENST00000476487.5_1_5:177651591-177651855:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	455.784036	909.553519	-1.2588	-0.00057375	4.879	0.0022237	3.6201	0.00165	455.7860720486875	42.537	0.35414	42.542	42.422	42.776	0.0043983	-0.05817	0.0011033	NaN	35.618	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48080			33452	12339	22093	22103							0.0951243007971243
LPSLLPVP	8	Unmodified	_LPSLLPVP_					0	0	0		ENST00000433094.1_1_20:46994536-46995317:+|nuORF	ENST00000433094.1_1_20:46994536-46995317:+|nuORF	ENST00000433094.1_1_20:46994536-46995317:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2896423339844	2	418.268022	834.521491	0.020265	8.4763E-06	0.30969	0.00012953	0.32995	0.00013801	418.2681205917785	71.928	0.53493	72.478	72.237	72.772	0.55008					14	12	2	0	0	0	0.4196	1	8061	8061		14.664	0	1	61000			33453	11681	22094	22104	38217	38217					0.09761062396569287
LPSLPTLPTL	10	Unmodified	_LPSLPTLPTL_					0	0	0		nc|ENSG00000105227|Q9BXM0-3|PRX;ENST00000291825.11_2_19:40899875-40904000:-|nuORF;ENSG00000105227|ENST00000324001|PRX	nc|ENSG00000105227|Q9BXM0-3|PRX	nc|ENSG00000105227|Q9BXM0-3|PRX	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3239135742188	2	526.323525	1050.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.746	1	55.709	55.209	56.209	-0.036827								0	0	0	0.45132	1	4687	4687		27.882	1.0861	1				33454	2192	22095	22105	38218	38218					0.10920657313999982
LPSLVFPE	8	Unmodified	_LPSLVFPE_					0	0	0			REV__ENST00000444232.3_1_4:6676360-6676907:+|nuORF	REV__ENST00000444232.3_1_4:6676360-6676907:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7540283203125	2	451.255111	900.49567	-1.2606	-0.00056883	3.0658	0.0013835	1.8052	0.00081463	451.2563499921874	79.813	0.74306	79.944	79.568	80.311	0.13085					36	26	2	0	0	0	0.4196	1	7607	7607		18.324	6.8134	1	71220	+		33455	24843	22096	22106	38219	38219					0.041441681542892184
LPSPFAHGSGQ	11	Unmodified	_LPSPFAHGSGQ_					0	0	0			REV__ENSG00000149506|ENST00000278853|ZP1	REV__ENSG00000149506|ENST00000278853|ZP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.2705688476562	2	549.272355	1096.53016	0.12965	7.1211E-05	-0.43884	-0.00024104	-0.30919	-0.00016983	549.2720424745052	43.762	0.45013	43.771	43.434	43.884	0.0084534					23	10	4	0	0	0	0.7434	1	3044	3044		23.523	0	1	180610	+		33456	20175	22097	22107	38220	38220					-0.01424615704900134
LPSPLPTKRTR	11	Unmodified	_LPSPLPTKRTR_					0	0	0		ENSG00000172346|ENST00000306149|CSDC2	ENSG00000172346|ENST00000306149|CSDC2	ENSG00000172346|ENST00000306149|CSDC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5930480957031	3	422.594461	1264.76155	-0.68255	-0.00028844	-2.817	-0.0011905	-3.4996	-0.0014789	422.59313934575044	54.378	2.61	54.329	53.535	56.145	-0.049271					161	81	4	0	0	0	0.75121	1	4529	4529		21.78	1.75	1	1116400			33457	6764	22098	22108	38221	38221					0.13976431996775318
LPSPTPLT	8	Unmodified	_LPSPTPLT_					0	0	0		ENST00000303329.8_1_15:80887420-80887516:+|nuORF	ENST00000303329.8_1_15:80887420-80887516:+|nuORF	ENST00000303329.8_1_15:80887420-80887516:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1938781738281	2	413.239461	824.46437	-1.8223	-0.00075304	-3.15	-0.0013017	-4.9723	-0.0020547	413.2376801001814	83.51	0.6037	83.675	83.406	84.009	0.1651					20	13	2	0	0	0	0.4196	1	8078	8078		26.796	12.132	1	36259			33458	9831	22099	22109	38222	38222					0.04511595120175116
LPSPVTAQKY	10	Unmodified	_LPSPVTAQKY_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.3070678710938	2	552.308406	1102.60226	-1.0879	-0.00060085	-0.079474	-4.3894E-05	-1.1674	-0.00064474	552.3082453141083	45.077	0.89475	45.54	45.106	46	0.46313					60	21	4	0	0	0	1.088E-16	6	4185	4150;4161;4173;4185;4196;4209		168.26	85.508	1	2877500			33459	6314	22100	22110	38223;38224;38225;38226;38227;38228	38226					0.055062986488110255
LPSPVTAQKY	10	Unmodified	_LPSPVTAQKY_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.3076782226562	2	552.308406	1102.60226	-0.99863	-0.00055155	-0.16905	-9.3367E-05	-1.1677	-0.00064492	552.3081329417583	44.944	0.97478	45.788	45.262	46.236	0.84437					62	23	3	0	0	0	2.7391000000000002E-24	7	4154	4131;4141;4154;4165;4177;4189;4203		181.41	96.492	1	2372300			33460	6314	22100	22110	38229;38230;38231;38232;38233;38234;38235	38231					0.055062986488110255
LPSRETFVN	9	Unmodified	_LPSRETFVN_					0	0	0		ENSG00000138039|ENST00000294954|LHCGR	ENSG00000138039|ENST00000294954|LHCGR	ENSG00000138039|ENST00000294954|LHCGR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7830200195312	2	531.782556	1061.55056	0.46378	0.00024663	-1.044	-0.00055518	-0.58021	-0.00030855	531.7820031077274	29.432	2.4582	29.343	28.288	30.746	-0.089544					170	57	5	0	0	0	0.33718	1	1796	1796		62.107	5.3864	1	12586000			33461	4260	22101	22111	38236	38236					0.022245549549097632
LPSRHLLF	8	Unmodified	_LPSRHLLF_					0	0	0		ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79486083984375	2	491.795269	981.575986	-1.6029	-0.00078829	2.358	0.0011597	0.75513	0.00037137	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.90465	1	3308	3308		40.573	8.6178	1	603870			33462	12686	22102	22112	38237	38237					0.08446074267988024
LPSRHLLF	8	Unmodified	_LPSRHLLF_					0	0	0		ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7947082519531	2	491.795269	981.575986	-2.0246	-0.0009957	2.587	0.0012723	0.56235	0.00027656	491.79643169128343	45.478	1.3283	45.474	44.66	45.989	-0.0041618					90	30	4	0	0	0	0.88915	1	3567	3567		35.201	6.9464	1	433340			33463	12686	22102	22112	38238	38238					0.08446074267988024
LPSRHLLF	8	Unmodified	_LPSRHLLF_					0	0	0		ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7950134277344	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.84341	1	4307	4307		24.203	0	1	1232600			33464	12686	22102	22112	38239	38239					0.08446074267988024
LPSRHLLF	8	Unmodified	_LPSRHLLF_					0	0	0		ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79461669921875	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.87479	1	4524	4524		30.504	5.0535	1	1759500			33465	12686	22102	22112	38240	38240					0.08446074267988024
LPSRHLLF	8	Unmodified	_LPSRHLLF_					0	0	0		ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7961730957031	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.87922	1	4078	4078		31.955	1.4512	1	581270			33466	12686	22102	22112	38241	38241					0.08446074267988024
LPSRHLLF	8	Unmodified	_LPSRHLLF_					0	0	0		ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7962341308594	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.81548	2	4182	4174;4182		28.254	2.1574	1	412030			33467	12686	22102	22112	38242;38243	38243					0.08446074267988024
LPSRHLLF	8	Unmodified	_LPSRHLLF_					0	0	0		ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.795654296875	2	491.795269	981.575986	-0.16137	-7.9361E-05	1.242	0.0006108	1.0806	0.00053144	491.795730554191	52.394	1.7298	53.062	52.517	54.247	0.6673					112	41	4	0	0	0	0.88915	1	5334	5334		35.201	5.3592	1	2437000			33468	12686	22102	22112	38244	38244					0.08446074267988024
LPSRLPKW	8	Unmodified	_LPSRLPKW_					0	0	0		ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8026123046875	2	498.803094	995.591636	-0.601	-0.00029978	1.7229	0.00085937	1.1219	0.00055959	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.91977	1	4711	4711		45.952	12.436	1	2240900			33469	3416	22103	22113	38245	38245					0.09366360785020333
LPSRPAQRGY	10	Unmodified	_LPSRPAQRGY_					0	0	0		ENST00000554799.1_1_14:76637034-76644553:+|nuORF;nc|ENSG00000089916|Q9NWQ4-1|GPATCH2L;nc|ENSG00000089916|Q9NWQ4-4|GPATCH2L;ENSG00000089916|ENST00000261530|GPATCH2L	ENST00000554799.1_1_14:76637034-76644553:+|nuORF	ENST00000554799.1_1_14:76637034-76644553:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.8143920898438	2	572.814722	1143.61489	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.079	1	40.085	39.585	40.585	0.0065002								0	0	0	0.45132	1	2509	2509		27.882	2.4321	1				33470	1635	22104	22114	38246	38246					0.048827548317149194
LPSRYLPGWGM	11	Unmodified	_LPSRYLPGWGM_					0	0	0		ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENST00000532027.5_1_11:6568031-6569307:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	638.82958984375	2	638.828983	1275.64341	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.465	1	78.411	77.911	78.911	-0.053558								0	0	0	0.56276	1	7818	7818		49.442	4.4193	1				33471	13370	22105	22115	38247	38247					0.01661736416599524
LPSSEVVKF	9	Unmodified	_LPSSEVVKF_					0	0	0		ENSG00000145365|ENST00000361717|TIFA	ENSG00000145365|ENST00000361717|TIFA	ENSG00000145365|ENST00000361717|TIFA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.28387451171875	2	503.2844	1004.55425	0.071561	3.6016E-05	-0.40818	-0.00020543	-0.33662	-0.00016942	503.2841066180641	54.446	0.75619	55.031	54.749	55.505	0.58474					37	17	3	0	0	0	0.12688	1	5566	5566		87.696	20.203	1	1031800			33472	4766	22106	22116	38248	38248					0.05215224728760859
LPSSKRKPG	9	Unmodified	_LPSSKRKPG_					0	0	0		ENST00000482360.5_1_1:6646544-6646703:+|nuORF	ENST00000482360.5_1_1:6646544-6646703:+|nuORF	ENST00000482360.5_1_1:6646544-6646703:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7188720703125	2	485.295633	968.576714	-1.6628	-0.00080696	1.1913	0.00057814	-0.47152	-0.00022883	485.2961851792957	100.83	1.3317	101	100.54	101.88	0.16987					43	32	2	0	0	0	0.20789	1	10430	10430		47.657	28.297	1	486430			33473	12484	22107	22117	38249	38249					0.09116868917044485
LPSSLAVLL	9	Unmodified	_LPSSLAVLL_					0	0	0		ENST00000564176.5_1_16:31483548-31484082:+|nuORF	ENST00000564176.5_1_16:31483548-31484082:+|nuORF	ENST00000564176.5_1_16:31483548-31484082:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7925109863281	2	456.791861	911.569169	0.10619	4.8505E-05	2.6551	0.0012128	2.7613	0.0012614	456.7929673289598	38.995	1.2001	38.965	38.494	39.694	-0.03027					96	27	4	0	0	0	0.7932	1	2623	2623		21.702	3.3779	1	2198500			33474	13883	22108	22118	38250	38250					0.10984716596760791
LPSSPVRS	8	Unmodified	_LPSSPVRS_					0	0	0			REV__ENST00000372409.7_1_20:44563346-44566100:+|nuORF	REV__ENST00000372409.7_1_20:44563346-44566100:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.74078369140625	2	421.74016	841.465767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.164	1	74.207	73.707	74.707	0.0429								0	0	0	0.29703	1	7085	7085		37.159	0	1		+		33475	25718	22109	22119	38251	38251					0.03869229208953584
LPSTKLPI	8	Unmodified	_LPSTKLPI_					0	0	0			REV__ENST00000415967.2_1_7:56059545-56066762:+|nuORF	REV__ENST00000415967.2_1_7:56059545-56066762:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7812194824219	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.064	1	68.095	67.595	68.595	0.030571								0	0	0	0.29353	1	6484	6484		28.254	0	1		+		33476	20029	22110	22120	38252	38252					0.10388447425293634
LPSTVLAII	9	Unmodified	_LPSTVLAII_					0	0	0			REV__nc|ENSG00000137393|Q7Z419-2|RNF144B	REV__nc|ENSG00000137393|Q7Z419-2|RNF144B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8011474609375	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.7932	1	3015	3015		24.203	1.1603	1	1091400	+		33477	19380	22111	22121	38253	38253					0.11905003113804469
LPSVIVPRRM	10	Unmodified	_LPSVIVPRRM_					0	0	0		ENST00000429989.7_1_10:82281286-82281514:+|nuORF	ENST00000429989.7_1_10:82281286-82281514:+|nuORF	ENST00000429989.7_1_10:82281286-82281514:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	584.3567504882812	2	584.355168	1166.69578	0.8115	0.00047421	0.56134	0.00032802	1.3728	0.00080223	584.3555753434755	92.506	2.8121	92.665	91.311	94.123	0.15874					185	66	3	0	0	0	0.86272	1	9383	9383		24.519	1.9395	1	722410			33478	11621	22112	22122	38254	38254					0.11910319550224813
LPSVLILASY	10	Unmodified	_LPSVLILASY_					0	0	0		nc|ENSG00000176510|Q8NH08|OR10AC1	nc|ENSG00000176510|Q8NH08|OR10AC1	nc|ENSG00000176510|Q8NH08|OR10AC1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3261108398438	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.85	1	112.83	112.33	113.33	-0.024811								0	0	0	0.45132	1	12477	12477		23.042	0	1				33479	15113	22113	22123	38255	38255					0.09816657313990618
LPSVVKVP	8	Unmodified	_LPSVVKVP_					0	0	0			REV__ENST00000449570.6_1_3:9798246-9807816:+|nuORF	REV__ENST00000449570.6_1_3:9798246-9807816:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7744445800781	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.884	1	3473	3473		33.516	1.5607	1	11423000	+		33480	26854	22114	22124	38256	38256					0.10712464770847419
LPSVVKVP	8	Unmodified	_LPSVVKVP_					0	0	0			REV__ENST00000449570.6_1_3:9798246-9807816:+|nuORF	REV__ENST00000449570.6_1_3:9798246-9807816:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7748718261719	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.92457	1	3242	3242		47.916	1.9636	1	10266000	+		33481	26854	22114	22124	38257	38257					0.10712464770847419
LPSWTAAR	8	Unmodified	_LPSWTAAR_					0	0	0		ENST00000566085.5_1_16:2506324-2506558:-|nuORF	ENST00000566085.5_1_16:2506324-2506558:-|nuORF	ENST00000566085.5_1_16:2506324-2506558:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2489929199219	2	451.248152	900.481751	-1.4716	-0.00066404	2.9168	0.0013162	1.4452	0.00065215	451.24928193885836	68.02	1.4601	68.02	67.491	68.952	0					124	59	3	0	0	0	0.82658	1	6032	6032		21.96	1.013	1	151770			33482	13929	22115	22125	38258	38258					0.027529354458465605
LPSWVRPLQTS	11	Unmodified	_LPSWVRPLQTS_					0	0	0			REV__ENST00000480380.1_1_1:19545909-19546163:-|nuORF	REV__ENST00000480380.1_1_1:19545909-19546163:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3639526367188	2	642.358962	1282.70337	2.6975	0.0017327	2.3103	0.0014841	5.0078	0.0032168	642.3601603180224	112.87	0.9769	112.84	112.65	113.62	-0.024811					46	24	2	0	0	0	0.66929	1	12566	12566		36.447	0	1	12229000	+		33483	27416	22116	22126	38259	38259					0.0733275035152019
LPTEEEWEF	9	Unmodified	_LPTEEEWEF_					0	0	0		nc|ENSG00000129103|Q8NBJ7-2|SUMF2;ENSG00000129103|ENST00000434526|SUMF2;nc|ENSG00000129103|Q8NBJ7-3|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.263916015625	2	590.263862	1178.51317	-0.77729	-0.00045881	1.0883	0.00064238	0.311	0.00018357	590.2644066701059	82.337	1.1366	82.764	82.313	83.45	0.42645					72	27	4	0	0	0	0.17307	2	9518	9518;9530		79.451	9.8234	1	3187300			33484	3574	22117	22127	38260;38261	38260					-0.06894581101369113
LPTEEEWEF	9	Unmodified	_LPTEEEWEF_					0	0	0		nc|ENSG00000129103|Q8NBJ7-2|SUMF2;ENSG00000129103|ENST00000434526|SUMF2;nc|ENSG00000129103|Q8NBJ7-3|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.263671875	2	590.263862	1178.51317	0.086308	5.0945E-05	0.12805	7.5584E-05	0.21436	0.00012653	590.2638249232199	82.298	1.0209	82.772	82.355	83.376	0.47383					73	24	4	0	0	0	0.31972	1	9564	9564		63.306	6.5852	1	3517700			33485	3574	22117	22127	38262	38262					-0.06894581101369113
LPTHVRKNPHS	11	Unmodified	_LPTHVRKNPHS_					0	0	0		nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4	nc|ENSG00000071054|O95819-4|MAP4K4	nc|ENSG00000071054|O95819-4|MAP4K4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3695678710938	2	643.359828	1284.7051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.38	1	115.36	114.86	115.86	-0.02433								0	0	0	0.56276	1	12779	12779		26.693	0	1				33486	14775	22118	22128	38263	38263					0.0741380416013726
LPTIGGRRG	9	Unmodified	_LPTIGGRRG_					0	0	0		ENST00000466100.1_1_9:35057510-35057546:-|nuORF	ENST00000466100.1_1_9:35057510-35057546:-|nuORF	ENST00000466100.1_1_9:35057510-35057546:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.77825927734375	2	463.780151	925.545748	-2.226	-0.0010324	-1.7375	-0.00080582	-3.9635	-0.0018382	463.77924988782166	40.526	1.7931	40.918	39.408	41.202	0.39209					79	45	2	0	0	0	0.35373	3	3475	3430;3465;3475		60.972	4.2509	1	9649600			33487	12124	22119	22129	38264;38265;38266	38266					0.079997156028071
LPTIGGRRG	9	Unmodified	_LPTIGGRRG_					0	0	0		ENST00000466100.1_1_9:35057510-35057546:-|nuORF	ENST00000466100.1_1_9:35057510-35057546:-|nuORF	ENST00000466100.1_1_9:35057510-35057546:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.774169921875	2	463.780151	925.545748	-1.6269	-0.00075451	-3.3133	-0.0015366	-4.9402	-0.0022911	463.77871170676815	40.303	0.42848	40.892	40.721	41.149	0.58915					28	11	4	0	0	0	0.35373	1	3436	3436		60.972	5.4677	1	7368700			33488	12124	22119	22129	38267	38267					0.079997156028071
LPTIPVTT	8	Unmodified	_LPTIPVTT_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.2542419433594	2	421.255111	840.49567	-0.18708	-7.8807E-05	-2.5351	-0.0010679	-2.7222	-0.0011467	421.25387987106194	84.393	1.9611	84.46	83.811	85.772	0.067177					92	44	3	0	0	0	0.86791	1	8393	8393		28.254	1.4582	1	712040	+		33489	22442	22120	22130	38268	38268					0.06904168154278523
LPTKKFWEPD	10	Unmodified	_LPTKKFWEPD_					0	0	0		nc|ENSG00000055917|Q8TB72-2|PUM2;ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72|PUM2;ENST00000420234.5_1_2:20508312-20527121:-|nuORF	nc|ENSG00000055917|Q8TB72-2|PUM2	nc|ENSG00000055917|Q8TB72-2|PUM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	630.834228515625	2	630.834788	1259.65502	-0.66142	-0.00041725	-2.9566	-0.0018651	-3.618	-0.0022824	630.8327702934129	61.027	1.5557	61.416	61.067	62.623	0.38945					100	41	3	0	0	0	0.64457	1	6569	6569		47.657	2.6351	1	1458500			33490	1030	22121	22131	38269	38269					0.0355825671160801
LPTLHYLLFKV	11	Unmodified	_LPTLHYLLFKV_					0	0	0		chr10:89285264-89286872|20|25.55|0.0|21.28|+|1|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|10;chr10:89285264-89286796|15|22.93|0.0|21.13|+|2|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286796,89288116|IFIT2,None|12	chr10:89285264-89286872|20|25.55|0.0|21.28|+|1|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|10	chr10:89285264-89286872|20|25.55|0.0|21.28|+|1|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.6093444824219	3	448.607708	1342.80129	0.5352	0.00024009	3.2143	0.001442	3.7495	0.001682	448.6089733377508	76.693	0.99095	76.828	76.468	77.459	0.13478					122	48	3	0	0	0	0.74771	1	7163	7163		22.562	0.78116	1	670390			33491	89	22122	22132	38270	38270					0.14360558947464597
LPTLPVTLG	9	Unmodified	_LPTLPVTLG_					0	0	0		ENST00000324432.9_1_7:76099677-76109759:+|nuORF	ENST00000324432.9_1_7:76099677-76109759:+|nuORF	ENST00000324432.9_1_7:76099677-76109759:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.78466796875	2	455.784036	909.553519	-1.7491	-0.00079722	3.2958	0.0015022	1.5467	0.00070496	455.78533618800145	42.014	1.5481	42.712	42.124	43.672	0.69754					60	38	2	0	0	0	0.78058	1	3728	3728		30.504	0	1	3887800			33492	10061	22123	22133	38271	38271					0.0951243007971243
LPTLRPARSPT	11	Unmodified	_LPTLRPARSPT_					0	0	0		ENST00000373655.6_2_1:32229559-32229598:-|nuORF	ENST00000373655.6_2_1:32229559-32229598:-|nuORF	ENST00000373655.6_2_1:32229559-32229598:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5749206542969	3	403.575178	1207.70371	-1.7546	-0.00070812	0.79854	0.00032227	-0.95608	-0.00038585	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.71207	1	8003	8003		29.551	0.97402	1	1090300			33493	10750	22124	22134	38272	38272					0.10816170071348097
LPTLRPARSPT	11	Unmodified	_LPTLRPARSPT_					0	0	0		ENST00000373655.6_2_1:32229559-32229598:-|nuORF	ENST00000373655.6_2_1:32229559-32229598:-|nuORF	ENST00000373655.6_2_1:32229559-32229598:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5748291015625	3	403.575178	1207.70371	0.82597	0.00033334	-2.2428	-0.00090514	-1.4168	-0.0005718	403.5742849619775	82.098	2.6206	82.524	81.753	84.373	0.42646					188	63	3	0	0	0	0.69071	1	9391	9391		33.039	0	1	14382000			33494	10750	22124	22134	38273	38273					0.10816170071348097
LPTLRPARSPT	11	Unmodified	_LPTLRPARSPT_					0	0	0		ENST00000373655.6_2_1:32229559-32229598:-|nuORF	ENST00000373655.6_2_1:32229559-32229598:-|nuORF	ENST00000373655.6_2_1:32229559-32229598:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57501220703125	3	403.575178	1207.70371	-0.098768	-3.986E-05	-1.4245	-0.00057487	-1.5232	-0.00061473	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.68431	1	9395	9395		34.087	7.3368	1	16485000			33495	10750	22124	22134	38274	38274					0.10816170071348097
LPTLRPMV	8	Unmodified	_LPTLRPMV_					0	0	0			REV__ENST00000441339.2_11:69061897-69062793:+|nuORF	REV__ENST00000441339.2_11:69061897-69062793:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.7790832519531	2	463.778231	925.541908	-1.147	-0.00053196	2.954	0.00137	1.807	0.00083807	463.7795203581368	39.498	0.37845	39.506	39.297	39.676	0.007618					15	9	2	0	0	0	0.86288	1	2436	2436		26.796	1.3459	1	213380	+		33496	26754	22125	22135	38275	38275					0.07615909784726682
LPTLTVLIPL	10	Unmodified	_LPTLTVLIPL_					0	0	0		nc|ENSG00000255072|Q3MUY2|PIGY	nc|ENSG00000255072|Q3MUY2|PIGY	nc|ENSG00000255072|Q3MUY2|PIGY	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	540.359619140625	2	540.357368	1078.70018	-1.4718	-0.00079528	3.9627	0.0021413	2.4909	0.001346	540.3593515673492	36.742	1.4181	36.742	36.293	37.711	0					69	32	3	0	0	0	0.88945	1	2165	2165		10.866	0	1	257620			33497	15295	22126	22136	38276	38276					0.16398107244822313
LPTLTVLIPL	10	Unmodified	_LPTLTVLIPL_					0	0	0		nc|ENSG00000255072|Q3MUY2|PIGY	nc|ENSG00000255072|Q3MUY2|PIGY	nc|ENSG00000255072|Q3MUY2|PIGY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.3585815429688	2	540.357368	1078.70018	-0.09847	-5.3209E-05	2.5238	0.0013637	2.4253	0.0013105	540.3585531343375	36.951	1.7168	36.927	36.371	38.088	-0.023979					87	38	3	0	0	0	0.86589	1	2413	2413		29.15	0	1	433100			33498	15295	22126	22136	38277	38277					0.16398107244822313
LPTLTVLIPL	10	Unmodified	_LPTLTVLIPL_					0	0	0		nc|ENSG00000255072|Q3MUY2|PIGY	nc|ENSG00000255072|Q3MUY2|PIGY	nc|ENSG00000255072|Q3MUY2|PIGY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.3585815429688	2	540.357368	1078.70018	-0.068166	-3.6834E-05	2.3888	0.0012908	2.3206	0.001254	540.3584971364328	36.917	1.6881	36.864	36.337	38.025	-0.053558					103	37	4	0	0	0	0.88541	1	2534	2534		11.511	0	1	646150			33499	15295	22126	22136	38278	38278					0.16398107244822313
LPTLTVLIPL	10	Unmodified	_LPTLTVLIPL_					0	0	0		nc|ENSG00000255072|Q3MUY2|PIGY	nc|ENSG00000255072|Q3MUY2|PIGY	nc|ENSG00000255072|Q3MUY2|PIGY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3598022460938	2	540.357368	1078.70018	-0.87065	-0.00047046	3.4074	0.0018412	2.5367	0.0013707	540.3590107608643	36.885	1.6	36.896	36.391	37.991	0.011173					96	35	4	0	0	0	0.85939	1	2395	2395		23.042	0	1	594400			33500	15295	22126	22136	38279	38279					0.16398107244822313
LPTLTVLIPL	10	Unmodified	_LPTLTVLIPL_					0	0	0		nc|ENSG00000255072|Q3MUY2|PIGY	nc|ENSG00000255072|Q3MUY2|PIGY	nc|ENSG00000255072|Q3MUY2|PIGY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.3587036132812	2	540.357368	1078.70018	-0.08079	-4.3656E-05	2.554	0.0013801	2.4732	0.0013364	540.3585375612031	37.328	1.0489	37.641	37.042	38.091	0.31312					64	25	4	0	0	0	0.85958	1	2981	2981		15.642	0	1	1061500			33501	15295	22126	22136	38280	38280					0.16398107244822313
LPTNLTVAT	9	Unmodified	_LPTNLTVAT_					0	0	0		ENST00000461757.1_1_2:27424532-27424700:-|nuORF;ENSG00000138074|ENST00000310574|SLC5A6	ENST00000461757.1_1_2:27424532-27424700:-|nuORF	ENST00000461757.1_1_2:27424532-27424700:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2688293457031	2	465.26875	928.522947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.144	1	81.144	80.644	81.644	0								0	0	0	0.30053	1	7517	7517		30.504	1.3541	1				33502	4263	22127	22137	38281	38281					0.055826516946467564
LPTNRKAN	8	Unmodified	_LPTNRKAN_					0	0	0		nc|ENSG00000118518|Q9NTX7-2|RNF146;ENSG00000118518|ENST00000368314|RNF146	nc|ENSG00000118518|Q9NTX7-2|RNF146	nc|ENSG00000118518|Q9NTX7-2|RNF146	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.26397705078125	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.89043	1	9565	9565		35.618	5.1146	1	3505500			33503	3034	22128	22138	38282	38282					0.054357228488470355
LPTPMLPPPPP	11	Unmodified	_LPTPMLPPPPP_					0	0	0		nc|ENSG00000162599|Q12857-2|NFIA;nc|ENSG00000162599|Q12857-3|NFIA;ENSG00000162599|ENST00000403491|NFIA;nc|ENSG00000162599|Q12857-4|NFIA	nc|ENSG00000162599|Q12857-2|NFIA	nc|ENSG00000162599|Q12857-2|NFIA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.3120727539062	2	578.825378	1155.6362	3.092	0.0017898	-1.9875	-0.0011504	1.1046	0.00063937	578.8241780119984	109.92	0.09201	109.89	109.83	109.92	-0.027641					6	3	2	0	0	0	0.17289	1	12159	12159		21.96	4.5949	1	741990			33504	5701	22129	22139	38283	38283					0.06461003816207267
LPTPMLPPPPP	11	Unmodified	_LPTPMLPPPPP_					0	0	0		nc|ENSG00000162599|Q12857-2|NFIA;nc|ENSG00000162599|Q12857-3|NFIA;ENSG00000162599|ENST00000403491|NFIA;nc|ENSG00000162599|Q12857-4|NFIA	nc|ENSG00000162599|Q12857-2|NFIA	nc|ENSG00000162599|Q12857-2|NFIA	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	578.825378	1155.6362	-0.30334	-0.00017558	2.0211	0.0011699	1.7178	0.00099428	578.8264962466317	109.89	0.2655	109.89	109.73	110	0	-0.017514	0.0041932	NaN	21.96	15	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	195590			33505	5701	22129	22139							0.06461003816207267
LPTPMLPPPPP	11	Unmodified	_LPTPMLPPPPP_					0	0	0		nc|ENSG00000162599|Q12857-2|NFIA;nc|ENSG00000162599|Q12857-3|NFIA;ENSG00000162599|ENST00000403491|NFIA;nc|ENSG00000162599|Q12857-4|NFIA	nc|ENSG00000162599|Q12857-2|NFIA	nc|ENSG00000162599|Q12857-2|NFIA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	578.825378	1155.6362	-0.92621	-0.00053612	1.4218	0.00082295	0.49555	0.00028684	579.3275204502751	110	0.085342	109.95	109.91	110	-0.055084	0.037787	0.0034994	NaN	21.96	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62972			33506	5701	22129	22139							0.06461003816207267
LPTRVLRLTR	10	Unmodified	_LPTRVLRLTR_					0	0	0		ENST00000484115.5_1_3:49042279-49042675:+|nuORF	ENST00000484115.5_1_3:49042279-49042675:+|nuORF	ENST00000484115.5_1_3:49042279-49042675:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.9342346191406	3	408.934818	1223.78262	0.012697	5.1924E-06	-2.0601	-0.00084244	-2.0474	-0.00083725	408.933961832912	16.242	0.73024	16.301	16.127	16.857	0.059269					78	32	4	0	0	0	0.85004	1	147	147		17.167	2.9235	1	1215700			33507	12528	22130	22140	38284	38284					0.17968442096275794
LPTSALPPA	9	Unmodified	_LPTSALPPA_					0	0	0			REV__ENSG00000136002|ENST00000409359|ARHGEF4	REV__ENSG00000136002|ENST00000409359|ARHGEF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.75311279296875	2	433.752736	865.490919	-0.89842	-0.00038969	1.1465	0.00049731	0.2481	0.00010762	433.7530751140989	61.556	3.4273	61.944	61.394	64.821	0.38845					196	83	3	0	0	0	0.67235	1	6786	6786		42.474	7.2737	1	960390	+		33508	19279	22131	22141	38285	38285					0.05279284011521668
LPTSILEGY	9	Unmodified	_LPTSILEGY_					0	0	0			REV__nc|ENSG00000174516|Q8N2H9-3|PELI3	REV__nc|ENSG00000174516|Q8N2H9-3|PELI3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.7683410644531	2	496.768583	991.522613	-0.85663	-0.00042555	0.7533	0.00037422	-0.10333	-5.1331E-05	496.7687963716168	82.446	0.74309	82.873	82.587	83.33	0.42645					38	17	3	0	0	0	0.69914	1	9557	9557		40.573	1.7665	1	579950	+		33509	30041	22132	22142	38286	38286					0.026512319748121627
LPTVIICVM	9	Unmodified	_LPTVIICVM_					0	0	0		nc|ENSG00000114013|P42081-6|CD86;nc|ENSG00000114013|P42081-3|CD86;ENSG00000114013|ENST00000330540|CD86;nc|ENSG00000114013|P42081-2|CD86;nc|ENSG00000114013|P42081-5|CD86	nc|ENSG00000114013|P42081-6|CD86	nc|ENSG00000114013|P42081-6|CD86	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.77996826171875	2	494.782124	987.549696	-0.85772	-0.00042438	-2.6539	-0.0013131	-3.5116	-0.0017375	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.78058	1	8659	8659		30.504	1.3541	1	737700			33510	2756	22133	22143	38287	38287					0.05542300989998239
LPTVIIVN	8	Unmodified	_LPTVIIVN_					0	0	0		nc|ENSG00000170088|Q8IY95-2|TMEM192;ENSG00000170088|ENST00000306480|TMEM192	nc|ENSG00000170088|Q8IY95-2|TMEM192	nc|ENSG00000170088|Q8IY95-2|TMEM192	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77947998046875	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.315	1	58.285	57.785	58.785	-0.029865								0	0	0	0.29452	1	5417	5417		33.516	1.5607	1				33511	6559	22134	22144	38288	38288					0.10388447425293634
LPTVQSITF	9	Unmodified	_LPTVQSITF_					0	0	0			REV__ENSG00000117281|ENST00000369288|CD160	REV__ENSG00000117281|ENST00000369288|CD160	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.2837829589844	2	503.2844	1004.55425	0.095536	4.8082E-05	-0.22889	-0.00011519	-0.13335	-6.7113E-05	503.28408018274547	54.671	0.67083	55.077	54.781	55.452	0.40663					36	15	3	0	0	0	0.096131	1	5570	5570		93.195	8.2799	1	909010	+		33512	18253	22135	22145	38289	38289					0.05215224728760859
LPTVQSITF	9	Unmodified	_LPTVQSITF_					0	0	0			REV__ENSG00000117281|ENST00000369288|CD160	REV__ENSG00000117281|ENST00000369288|CD160	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	503.2844	1004.55425	0.095536	4.8082E-05	-0.22889	-0.00011519	-0.13335	-6.7113E-05	503.28408018274547	54.671	0.67083	55.077	54.781	55.452	0.40663	0.023093	0.00010737	NaN	93.195	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	909010	+		33513	18253	22135	22145							0.05215224728760859
LPVALPARWA	10	Unmodified	_LPVALPARWA_					0	0	0		ENSG00000105429|ENST00000251268|MEGF8;nc|ENSG00000105429|Q7Z7M0-2|MEGF8	ENSG00000105429|ENST00000251268|MEGF8	ENSG00000105429|ENST00000251268|MEGF8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.3325805664062	2	547.329476	1092.6444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.6	1	100.55	100.05	101.05	-0.052116								0	0	0	0.45132	1	10921	10921		31.955	1.4512	1				33514	2217	22136	22146	38290	38290					0.10178318847852097
LPVATLEKTLE	11	Unmodified	_LPVATLEKTLE_					0	0	0		ENST00000582301.5_1_9:22063975-22077773:+|nuORF	ENST00000582301.5_1_9:22063975-22077773:+|nuORF	ENST00000582301.5_1_9:22063975-22077773:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.24017333984375	3	405.239461	1212.69655	2.8569	0.0011577	-0.82813	-0.00033559	2.0288	0.00082215	405.2390473180589	103.36	0.5413	103.59	103.42	103.96	0.22556					22	12	2	0	0	0	0.71207	1	12590	12590		29.551	0	1	942410			33515	14112	22137	22147	38291	38291					0.09871392680292956
LPVCKISH	8	Unmodified	_LPVCKISH_					0	0	0			REV__ENSG00000125484|ENST00000372146|GTF3C4	REV__ENSG00000125484|ENST00000372146|GTF3C4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.73699951171875	2	448.754756	895.494958	-0.34998	-0.00015705	-2.6457	-0.0011873	-2.9957	-0.0013443	448.7528495964622	54.411	0.50264	54.996	54.708	55.211	0.58474					22	11	3	0	0	0	0.4196	1	5564	5564		40.573	0	1	208650	+		33516	18646	22138	22148	38292	38292					0.043030502335682286
LPVEETLKQLL	11	Unmodified	_LPVEETLKQLL_					0	0	0			REV__ENST00000559491.1_1_14:24629014-24629779:+|nuORF	REV__ENST00000559491.1_1_14:24629014-24629779:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8836059570312	2	641.884478	1281.7544	0.9141	0.00058675	-4.0885	-0.0026243	-3.1744	-0.0020376	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.69995	1	10300	10300		31.53	1.2121	1	4136300	+		33517	17029	22139	22149	38293	38293					0.12479654605704127
LPVEKVDVIIS	11	Unmodified	_LPVEKVDVIIS_					0	0	0		nc|ENSG00000185238|O60678-2|PRMT3;ENSG00000185238|ENST00000331079|PRMT3	nc|ENSG00000185238|O60678-2|PRMT3	nc|ENSG00000185238|O60678-2|PRMT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3698120117188	2	606.365921	1210.71729	2.2948	0.0013915	3.5883	0.0021758	5.8831	0.0035673	606.3679986963975	94.415	3.2479	94.356	93.249	96.497	-0.059212					198	76	3	0	0	0	0.72106	1	10105	10105		28.081	1.0342	1	800340			33518	7691	22140	22150	38294	38294					0.12035983059945465
LPVFFLEII	9	Unmodified	_LPVFFLEII_					0	0	0		nc|ENSG00000131389|P31641-2|SLC6A6;ENSG00000131389|ENST00000622186|SLC6A6	nc|ENSG00000131389|P31641-2|SLC6A6	nc|ENSG00000131389|P31641-2|SLC6A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.8285522460938	2	545.830986	1089.64742	-0.57663	-0.00031474	-3.7187	-0.0020298	-4.2953	-0.0023445	545.8288028912038	60.116	1.1634	60.148	59.766	60.929	0.032822					87	32	4	0	0	0	0.64338	1	5639	5639		44.531	0.41427	1	1445500			33519	3729	22141	22151	38295	38295					0.10618149181982517
LPVFWLLGII	10	Unmodified	_LPVFWLLGII_					0	0	0		nc|ENSG00000005483|Q8IZD2-5|KMT2E	nc|ENSG00000005483|Q8IZD2-5|KMT2E	nc|ENSG00000005483|Q8IZD2-5|KMT2E	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.866455078125	2	585.867903	1169.72125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.931	1	24.417	23.917	24.917	-0.51365								0	0	0	0.45132	1	1251	1251		26.796	2.5934	1				33520	14732	22142	22152	38296	38296					0.1431811734432813
LPVGIEQL	8	Unmodified	_LPVGIEQL_					0	0	0			REV__nc|ENSG00000136099|O95206-2|PCDH8	REV__nc|ENSG00000136099|O95206-2|PCDH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2584533691406	2	434.760561	867.506569	0.61637	0.00026798	-4.3451	-0.0018891	-3.7288	-0.0016211	434.7589702890546	87.554	3.2021	87.703	86.279	89.481	0.14956					123	75	2	0	0	0	0.86288	1	8538	8538		26.796	0	1	1373100	+		33521	19286	22143	22153	38297	38297					0.06751570528570028
LPVITDLEPVL	11	Unmodified	_LPVITDLEPVL_					0	0	0			REV__nc|ENSG00000114054|P05166-2|PCCB	REV__nc|ENSG00000114054|P05166-2|PCCB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5753173828125	3	403.576073	1207.70639	-0.15272	-6.1634E-05	-3.4024	-0.0013731	-3.5551	-0.0014348	403.57482141632175	80.779	1.0749	81.306	80.78	81.855	0.52676					103	25	6	0	0	0	0.66009	1	9334	9334		37.508	3.4217	1	21414000	+		33522	18027	22144	22154	38298	38298					0.11084580685678702
LPVKRLIDWQ	10	Unmodified	_LPVKRLIDWQ_					0	0	0			REV__ENST00000372927.5_2_X:100356228-100357313:+|nuORF	REV__ENST00000372927.5_2_X:100356228-100357313:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3758544921875	2	634.379697	1266.74484	-1.1773	-0.00074688	-3.1342	-0.0019883	-4.3115	-0.0027352	634.3774291341157	112.05	1.1748	112.03	111.8	112.98	-0.019882					84	36	4	0	0	0	0.85466	1	12022	12022		20.947	0.95016	1	22589000	+		33523	25740	22145	22155	38299	38299					0.12213931110841258
LPVKRPGKLTS	11	Unmodified	_LPVKRPGKLTS_					0	0	0		nc|ENSG00000111877|Q9NXL9-4|MCM9;ENSG00000111877|ENST00000619706|MCM9	nc|ENSG00000111877|Q9NXL9-4|MCM9	nc|ENSG00000111877|Q9NXL9-4|MCM9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	598.380859375	2	598.379697	1194.74484	0.35601	0.00021303	2.8174	0.0016859	3.1735	0.0018989	598.3813089320432	40.572	1.0575	40.654	40.231	41.288	0.081345					56	37	2	0	0	0	0.74763	1	2564	2564		22.58	2.5829	1	302330			33524	2618	22146	22156	38300	38300					0.15525931110823876
LPVLPPFPPPS	11	Unmodified	_LPVLPPFPPPS_					0	0	0		nc|ENSG00000197381|P78563-5|ADARB1;nc|ENSG00000197381|P78563-6|ADARB1;ENSG00000197381|ENST00000348831|ADARB1;nc|ENSG00000197381|P78563-3|ADARB1;nc|ENSG00000197381|P78563-4|ADARB1;nc|ENSG00000197381|P78563|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.8408813476562	2	580.839342	1159.66413	-0.70799	-0.00041123	2.7657	0.0016064	2.0577	0.0011952	580.8407660860938	69.805	0.83526	69.876	69.594	70.43	0.071045					106	41	3	0	0	0	0.75921	1	6289	6289		19.997	0	1	12587000			33525	15191	22147	22157	38301	38301					0.09068650067933959
LPVLPSSVAKV	11	Unmodified	_LPVLPSSVAKV_					0	0	0		ENST00000311626.8_1_17:46629919-46651266:-|nuORF	ENST00000311626.8_1_17:46629919-46651266:-|nuORF	ENST00000311626.8_1_17:46629919-46651266:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.3534545898438	2	555.350074	1108.6856	3.1602	0.001755	2.6303	0.0014608	5.7905	0.0032158	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.7144	2	10991	10991;11027		29.17	8.2231	1	5616800			33526	9932	22148	22158	38302;38303	38302					0.13560035096656975
LPVLRIWIIL	10	Unmodified	_LPVLRIWIIL_					0	0	0			REV__ENSG00000186871|ENST00000334463|ERCC6L	REV__ENSG00000186871|ENST00000334463|ERCC6L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.333740234375	2	618.415552	1234.81655	0.73417	0.00045402	-0.50795	-0.00031412	0.22622	0.0001399	618.4148710169352	58.157	0.11686	58.71	58.64	58.757	0.55323					4	2	2	0	0	0	0.37624	1	6095	6095		37.159	2.9866	1	89146	+		33527	22887	22149	22159	38304	38304					0.20853470535371343
LPVPAGPQPL	10	Unmodified	_LPVPAGPQPL_					0	0	0		nc|ENSG00000196150|P15622|ZNF250	nc|ENSG00000196150|P15622|ZNF250	nc|ENSG00000196150|P15622|ZNF250	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.79669189453125	2	494.794935	987.575317	-0.71818	-0.00035535	0.5403	0.00026734	-0.17788	-8.8012E-05	494.794924428077	59.527	1.1168	60.08	59.775	60.891	0.55323					46	29	3	0	0	0	0.50394	1	6282	6282		55.504	0	1	901690			33528	15176	22150	22160	38305	38305					0.08103234828286077
LPVPPMPPRPP	11	Unmodified	_LPVPPMPPRPP_					0	0	0		ENSG00000123576|ENST00000372588|ESX1	ENSG00000123576|ENST00000372588|ESX1	ENSG00000123576|ENST00000372588|ESX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.8475952148438	2	599.344269	1196.67399	0.8604	0.00051568	4.0725	0.0024408	4.9329	0.0029565	599.8484267978657	38.655	0.30651	38.665	38.417	38.724	0.010708					16	8	3	0	0	0	0.68378	1	2297	2297		34.173	0	1	69480			33529	3282	22151	22161	38306	38306					0.08351514801688609
LPVPTKQWKP	10	Unmodified	_LPVPTKQWKP_					0	0	0			REV__ENST00000534035.1_1_11:44102597-44105415:+|nuORF	REV__ENST00000534035.1_1_11:44102597-44105415:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3594970703125	2	597.355691	1192.69683	-0.63804	-0.00038114	1.1877	0.00070948	0.54967	0.00032835	597.3562120432921	59.176	1.2749	59.568	58.941	60.216	0.39209					69	30	3	0	0	0	0.70553	1	6255	6255		44.377	1.5129	1	461870	+		33530	28362	22152	22162	38307	38307					0.10818857190793096
LPVRIKPWLS	10	Unmodified	_LPVRIKPWLS_					0	0	0			REV__ENSG00000151348|ENST00000533608|EXT2	REV__ENSG00000151348|ENST00000533608|EXT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5748291015625	3	403.588648	1207.74411	-0.16327	-6.5893E-05	-1.9863	-0.00080166	-2.1496	-0.00086755	403.58779666734875	80.655	0.16768	81.181	81.035	81.203	0.52676					5	3	2	0	0	0	0.37624	1	9287	9287		26.063	0.9374	1	67605	+		33531	20246	22153	22163	38308	38308					0.14855136461778784
LPVRKRLGL	9	Unmodified	_LPVRKRLGL_					0	0	0			REV__ENST00000377304.6_1_10:18940268-18940346:-|nuORF	REV__ENST00000377304.6_1_10:18940268-18940346:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3607788085938	2	526.358568	1050.70258	1.0713	0.00056389	3.7812	0.0019903	4.8525	0.0025542	526.360423923534	32.788	1.6436	32.999	32.422	34.066	0.21168					152	38	5	0	0	0	0.74721	1	2470	2470		37.159	1.5408	1	7743700	+		33532	25866	22154	22164	38309	38309					0.1792600049311659
LPVSALRNSA	10	Unmodified	_LPVSALRNSA_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.2981567382812	2	514.298373	1026.58219	-0.73299	-0.00037698	1.1638	0.00059853	0.43078	0.00022155	514.2990191535417	96.746	3.1495	96.746	95.529	98.678	0					118	74	2	0	0	0	0.70553	2	9673	9673;9685		44.377	5.1244	1	424760			33533	4683	22155	22165	38310;38311	38310					0.0699654770885445
LPVSFEGT	8	Unmodified	_LPVSFEGT_					0	0	0			REV__nc|ENSG00000142609|Q9C0B2-2|CFAP74	REV__nc|ENSG00000142609|Q9C0B2-2|CFAP74	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	425.2218017578125	2	425.221268	848.427984	-1.1718	-0.00049826	2.6831	0.0011409	1.5113	0.00064265	425.2222867734936	88.655	1.3102	88.655	88.249	89.559	0					69	30	3	0	0	0	0.85277	1	8559	8559		25.45	1.2474	1	896950	+		33534	19746	22156	22166	38312	38312					-0.002292817765237487
LPVSFLMHTR	10	Unmodified	_LPVSFLMHTR_					0	0	0			REV__ENST00000290075.10_1_8:23423911-23424199:+|nuORF	REV__ENST00000290075.10_1_8:23423911-23424199:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	600.83251953125	2	600.831526	1199.6485	-0.89771	-0.00053938	2.055	0.0012347	1.1573	0.00069533	600.8329070575919	46.228	0.52188	47.151	46.833	47.355	0.92315					34	12	4	0	0	0	0.82886	1	4373	4373		37.812	0	1	847720	+		33535	24654	22157	22167	38313	38313					0.05666040279243134
LPVSPPSH	8	Unmodified	_LPVSPPSH_					0	0	0		ENST00000336967.7_1_19:54377816-54378302:+|nuORF	ENST00000336967.7_1_19:54377816-54378302:+|nuORF	ENST00000336967.7_1_19:54377816-54378302:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2898254394531	2	417.229428	832.444303	0.29729	0.00012404	0.03811	1.5901E-05	0.3354	0.00013994	417.2293298152772	74.836	0.61489	75.227	74.87	75.485	0.3911					24	14	2	0	0	0	0.4196	1	8440	8440		40.573	0	1	88380			33536	10178	22158	22168	38314	38314					0.02137844180231241
LPVSPRVKRR	10	Unmodified	_LPVSPRVKRR_					0	0	0		ENSG00000221878|ENST00000406070|PSG7;ENST00000599226.2_1_19:43430578-43430863:-|nuORF	ENSG00000221878|ENST00000406070|PSG7	ENSG00000221878|ENST00000406070|PSG7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2467346191406	3	403.263046	1206.76731	-1.929	-0.00077788	-4.111	-0.0016578	-6.0399	-0.0024357	403.26121881086647	104.52	0.11517	104.61	104.52	104.63	0.093857					4	2	2	0	0	0	0.37624	1	11038	11038		14.694	0	1	99712			33537	8676	22159	22169	38315	38315					0.17219575299100143
LPVSPVSTD	9	Unmodified	_LPVSPVSTD_					0	0	0			REV__nc|ENSG00000172367|Q86UT5-3|NHERF4	REV__nc|ENSG00000172367|Q86UT5-3|NHERF4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.26300048828125	2	457.745108	913.475663	0.30705	0.00014055	-3.8759	-0.0017742	-3.5688	-0.0016336	457.74337815850254	80.875	1.3252	80.931	80.187	81.512	0.055916					52	32	2	0	0	0	0.20789	1	8056	8056		16.473	0	1	89529	+		33538	21826	22160	22170	38316	38316					0.015463724236610688
LPVSTMLVVS	10	Unmodified	_LPVSTMLVVS_					0	0	0		nc|ENSG00000169876|Q685J3-2|MUC17;ENSG00000169876|ENST00000306151|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3032836914062	2	523.301736	1044.58892	0.60955	0.00031898	2.9734	0.001556	3.583	0.001875	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.71042	1	10082	10082		44.117	8.4985	1	4023800			33539	6534	22161	22171	38317	38317					0.06840724545213561
LPVSVVYV	8	Unmodified	_LPVSVVYV_					0	0	0		ENSG00000132911|ENST00000255262|NMUR2	ENSG00000132911|ENST00000255262|NMUR2	ENSG00000132911|ENST00000255262|NMUR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2630615234375	2	438.265479	874.516405	-1.2142	-0.00053214	-3.9242	-0.0017198	-5.1384	-0.002252	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.80963	1	3322	3322		15.636	0.77134	1	4828000			33540	3839	22162	22172	38318	38318					0.07412758533951092
LPVSYLEPKL	10	Unmodified	_LPVSYLEPKL_					0	0	0		ENSG00000156398|ENST00000369893|SFXN2	ENSG00000156398|ENST00000369893|SFXN2	ENSG00000156398|ENST00000369893|SFXN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	579.84423828125	2	579.842082	1157.66961	-0.30572	-0.00017727	3.2826	0.0019034	2.9769	0.0017261	579.8442285460155	102.54	1.4926	102.54	101.62	103.11	0					80	37	4	0	0	0	0.86272	1	10516	10516		24.519	0.99649	1	838830			33541	5376	22163	22173	38319	38319					0.09708328859755966
LPVTLRLIY	9	Unmodified	_LPVTLRLIY_					0	0	0		nc|ENSG00000133958|Q9P2D8-2|UNC79;chr14:93540831-93542466|19|12.21|0.74|4.05|+|ENST00000621021|UNC79,UNC79;chr14:93532578-93537989|19|12.0|0.65|4.2|+|ENST00000621021|UNC79,UNC79;chr14:93529326-93532550|21|10.48|0.57|4.21|+|ENST00000621021|UNC79,UNC79;chr14:93524042-93528558|19|11.84|0.52|4.51|+|ENST00000621021|UNC79,UNC79;chr14:93477728-93487663|23|11.22|0.59|4.24|+|ENST00000621021|UNC79,UNC79;chr14:93474393-93477558|17|15.47|0.73|4.4|+|ENST00000555664|UNC79,UNC79;nc|ENSG00000133958|Q9P2D8|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;ENSG00000133958|ENST00000695012|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.347412109375	2	544.347335	1086.68012	-0.27649	-0.0001505	0.33595	0.00018287	0.059459	3.2367E-05	544.3473894877965	79.99	0.8451	80.517	80.19	81.035	0.52676					43	19	3	0	0	0	0.76764	1	9218	9218		34.173	0	1	656480			33542	180	22164	22174	38320	38320					0.1402435630486707
LPVTLRLIY	9	Unmodified	_LPVTLRLIY_					0	0	0		nc|ENSG00000133958|Q9P2D8-2|UNC79;chr14:93540831-93542466|19|12.21|0.74|4.05|+|ENST00000621021|UNC79,UNC79;chr14:93532578-93537989|19|12.0|0.65|4.2|+|ENST00000621021|UNC79,UNC79;chr14:93529326-93532550|21|10.48|0.57|4.21|+|ENST00000621021|UNC79,UNC79;chr14:93524042-93528558|19|11.84|0.52|4.51|+|ENST00000621021|UNC79,UNC79;chr14:93477728-93487663|23|11.22|0.59|4.24|+|ENST00000621021|UNC79,UNC79;chr14:93474393-93477558|17|15.47|0.73|4.4|+|ENST00000555664|UNC79,UNC79;nc|ENSG00000133958|Q9P2D8|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;ENSG00000133958|ENST00000695012|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	544.347335	1086.68012	-0.77255	-0.00042054	0.9917	0.00053983	0.21915	0.00011929	544.347693675775	80.089	0.97281	80.505	80.082	81.055	0.41621	-0.0060247	0.00030285	NaN	34.173	44	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	550050			33543	180	22164	22174							0.1402435630486707
LPVTLSVAL	9	Unmodified	_LPVTLSVAL_					0	0	0			REV__nc|ENSG00000101474|Q9HDC9-2|APMAP	REV__nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79266357421875	2	456.791861	911.569169	0.19556	8.933E-05	2.7159	0.0012406	2.9114	0.0013299	456.79296638202106	38.11	0.49987	38.204	37.924	38.424	0.094318					45	16	3	0	0	0	0.7932	1	2257	2257		20.482	0	1	1181300	+		33544	17285	22165	22175	38321	38321					0.10984716596760791
LPVTTSSLI	9	Unmodified	_LPVTTSSLI_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7768859863281	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.47	1	80.47	79.97	80.97	0								0	0	0	0.29299	1	7427	7427		33.516	6.7195	1		+		33545	20239	22166	22176	38322	38322					0.07575822354476713
LPVVALNF	8	Unmodified	_LPVVALNF_					0	0	0		ENST00000461445.5_1_3:38049266-38050137:-|nuORF	ENST00000461445.5_1_3:38049266-38050137:-|nuORF	ENST00000461445.5_1_3:38049266-38050137:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7637634277344	2	436.765646	871.516739	0.46701	0.00020397	-4.4316	-0.0019356	-3.9646	-0.0017316	436.7635183439704	26.23	1.3576	26.275	25.815	27.173	0.045509					57	40	2	0	0	0	0.84443	1	1087	1087		60.404	11.193	1	139010			33546	12023	22167	22177	38323	38323					0.07584178253785012
LPVVKELA	8	Unmodified	_LPVVKELA_					0	0	0			REV__ENSG00000163331|ENST00000309950|DAPL1	REV__ENSG00000163331|ENST00000309950|DAPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77923583984375	2	434.778754	867.542954	-0.72462	-0.00031505	3.8898	0.0016912	3.1652	0.0013761	434.78037611122505	35.149	1.2526	35.093	34.81	36.063	-0.056381					100	28	4	0	0	0	0.82464	1	2332	2332		21.702	0	1	2671400	+		33547	20900	22168	22178	38324	38324					0.10388447425282266
LPVVKELA	8	Unmodified	_LPVVKELA_					0	0	0			REV__ENSG00000163331|ENST00000309950|DAPL1	REV__ENSG00000163331|ENST00000309950|DAPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7779235839844	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.85277	1	2293	2293		25.45	0	1	3951300	+		33548	20900	22168	22178	38325	38325					0.10388447425282266
LPVVKPSK	8	Unmodified	_LPVVKPSK_					0	0	0		ENSG00000176979|ENST00000512596|TRIM60	ENSG00000176979|ENST00000512596|TRIM60	ENSG00000176979|ENST00000512596|TRIM60	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.28753662109375	2	434.286746	866.558939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.4	1	54.393	53.893	54.893	-0.0077095								0	0	0	0.29631	1	4798	4798		25.45	7.1258	1				33549	7111	22169	22179	38326	38326					0.12032153662175915
LPVVKQSVK	9	Unmodified	_LPVVKQSVK_					0	0	0		nc|ENSG00000139746|Q5T8P6-5|RBM26;nc|ENSG00000139746|Q5T8P6-4|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26;nc|ENSG00000139746|Q5T8P6-2|RBM26;ENSG00000139746|ENST00000438737|RBM26	nc|ENSG00000139746|Q5T8P6-5|RBM26	nc|ENSG00000139746|Q5T8P6-5|RBM26	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.75299072265625	2	499.32386	996.633166	1.4793	0.00073863	-1.7167	-0.00085719	-0.23743	-0.00011855	499.3228921900381	35.837	0.50336	36.277	36.112	36.615	0.44043					19	12	2	0	0	0	0.20789	1	2818	2818		20.947	0.95016	1	162260			33550	4396	22170	22180	38327	38327					0.1347149675370929
LPVVLPLLL	9	Unmodified	_LPVVLPLLL_					0	0	0		nc|ENSG00000113273|P15848-2|ARSB;ENSG00000113273|ENST00000264914|ARSB	nc|ENSG00000113273|P15848-2|ARSB	nc|ENSG00000113273|P15848-2|ARSB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.35064697265625	2	488.843897	975.67324	-1.9876	-0.00097165	-0.7797	-0.00038115	-2.7673	-0.0013528	488.84332078771274	74.673	0.50105	74.718	74.479	74.98	0.04509					24	16	2	0	0	0	0.78292	1	7240	7240		29.842	8.1392	1	65842			33551	2711	22171	22181	38328	38328					0.18443043424292682
LPVVLPLLL	9	Unmodified	_LPVVLPLLL_					0	0	0		nc|ENSG00000113273|P15848-2|ARSB;ENSG00000113273|ENST00000264914|ARSB	nc|ENSG00000113273|P15848-2|ARSB	nc|ENSG00000113273|P15848-2|ARSB	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	488.843897	975.67324	-1.1851	-0.00057934	-1.3808	-0.000675	-2.5659	-0.0012543	488.84304648279647	75.116	0.52953	75.116	74.788	75.318	0	0.33059	0.00044671	NaN	29.842	21	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45658			33552	2711	22171	22181							0.18443043424292682
LPVVLPLLL	9	Unmodified	_LPVVLPLLL_					0	0	0		nc|ENSG00000113273|P15848-2|ARSB;ENSG00000113273|ENST00000264914|ARSB	nc|ENSG00000113273|P15848-2|ARSB	nc|ENSG00000113273|P15848-2|ARSB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	488.843897	975.67324	-0.30603	-0.0001496	-2.3395	-0.0011436	-2.6455	-0.0012932	488.84258107363263	74.76	0.50175	74.716	74.431	74.933	-0.043877	-0.068999	-0.00049054	NaN	29.842	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38989			33553	2711	22171	22181							0.18443043424292682
LPVVLPLLL	9	Unmodified	_LPVVLPLLL_					0	0	0		nc|ENSG00000113273|P15848-2|ARSB;ENSG00000113273|ENST00000264914|ARSB	nc|ENSG00000113273|P15848-2|ARSB	nc|ENSG00000113273|P15848-2|ARSB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	488.843897	975.67324	0.55525	0.00027143	-3.4234	-0.0016735	-2.8682	-0.0014021	488.8420422901233	74.579	0.67722	74.711	74.399	75.076	0.13208	-0.074253	-0.0015503	NaN	29.842	25	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62385			33554	2711	22171	22181							0.18443043424292682
LPVVPKATY	9	Unmodified	_LPVVPKATY_					0	0	0		nc|ENSG00000179604|Q9H3Q1-2|CDC42EP4;ENSG00000179604|ENST00000335793|CDC42EP4	nc|ENSG00000179604|Q9H3Q1-2|CDC42EP4	nc|ENSG00000179604|Q9H3Q1-2|CDC42EP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.25634765625	2	494.29731	986.580068	0.79333	0.00039214	-1.5069	-0.00074484	-0.71354	-0.0003527	494.2964534944034	50.883	0.69495	51.635	51.243	51.938	0.75174					26	16	2	0	0	0	0.20789	1	5042	5042		47.657	17.154	1	547690			33555	7282	22172	22182	38329	38329					0.08624118971022199
LPVVPKATY	9	Unmodified	_LPVVPKATY_					0	0	0		nc|ENSG00000179604|Q9H3Q1-2|CDC42EP4;ENSG00000179604|ENST00000335793|CDC42EP4	nc|ENSG00000179604|Q9H3Q1-2|CDC42EP4	nc|ENSG00000179604|Q9H3Q1-2|CDC42EP4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	494.29731	986.580068	-0.29807	-0.00014733	-0.46139	-0.00022806	-0.75946	-0.0003754	494.29697421480125	51.048	0.78746	51.483	51.161	51.948	0.43505	-0.075776	0.00045409	NaN	47.657	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	409800			33556	7282	22172	22182							0.08624118971022199
LPWFLITIGT	10	Unmodified	_LPWFLITIGT_					0	0	0			REV__ENSG00000184434|ENST00000380055|LRRC19	REV__ENSG00000184434|ENST00000380055|LRRC19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	580.839599609375	2	580.839342	1159.66413	-0.77465	-0.00044995	3.0037	0.0017447	2.229	0.0012947	580.8409079649531	69.999	0.8299	69.999	69.758	70.588	0					106	43	3	0	0	0	0.85939	2	6244	6244;6248		23.042	2.0956	1	7674300	+		33557	22676	22173	22183	38330;38331	38330					0.09068650067933959
LPWLGLAM	8	Unmodified	_LPWLGLAM_					0	0	0			REV__ENST00000598095.5_1_19:49842746-49843241:+|nuORF	REV__ENST00000598095.5_1_19:49842746-49843241:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7545471191406	2	450.754224	899.493896	-1.264	-0.00056978	1.1883	0.00053562	-0.075782	-3.4159E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.88393	1	7794	7794		33.493	5.2387	1	414240	+		33558	29278	22174	22184	38332	38332					0.040128358646711604
LPWNITVHF	9	Unmodified	_LPWNITVHF_					0	0	0		nc|ENSG00000057663|Q9H1Y0-2|ATG5;ENSG00000057663|ENST00000369076|ATG5	nc|ENSG00000057663|Q9H1Y0-2|ATG5	nc|ENSG00000057663|Q9H1Y0-2|ATG5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.28369140625	2	563.805834	1125.59712	0.096726	5.4535E-05	-0.13875	-7.8226E-05	-0.042021	-2.3692E-05	563.8055521446423	84.843	0.47662	85.282	85.026	85.502	0.43967					30	11	3	0	0	0	0.20789	1	9911	9911		42.396	1.618	1	269540			33559	1040	22175	22185	38333	38333					0.03934039576847681
LPWNITVHF	9	Unmodified	_LPWNITVHF_					0	0	0		nc|ENSG00000057663|Q9H1Y0-2|ATG5;ENSG00000057663|ENST00000369076|ATG5	nc|ENSG00000057663|Q9H1Y0-2|ATG5	nc|ENSG00000057663|Q9H1Y0-2|ATG5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	563.805834	1125.59712	0.21567	0.0001216	-0.12578	-7.0914E-05	0.089891	5.0681E-05	563.805682839963	84.922	0.43269	85.369	85.115	85.547	0.44736	0.043358	5.9505E-06	NaN	52.937	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	241070			33560	1040	22175	22185							0.03934039576847681
LPWRLHLLL	9	Unmodified	_LPWRLHLLL_					0	0	0		ENST00000394236.7_1_3:93617340-93617376:-|nuORF	ENST00000394236.7_1_3:93617340-93617376:-|nuORF	ENST00000394236.7_1_3:93617340-93617376:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.415283203125	2	580.868769	1159.72298	-0.9062	-0.00052638	-4.3887	-0.0025493	-5.2949	-0.0030757	580.866086291978	61.203	0.77498	61.757	61.481	62.256	0.55386					31	20	2	0	0	0	0.20789	1	6527	6527		18.324	0	1	243910			33561	11062	22176	22186	38334	38334					0.1495117115296125
LPWRLLRRRRA	11	Unmodified	_LPWRLLRRRRA_					0	0	0		ENST00000237186.10_1_6:83602743-83775466:-|nuORF	ENST00000237186.10_1_6:83602743-83775466:-|nuORF	ENST00000237186.10_1_6:83602743-83775466:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.3223876953125	3	498.319777	1491.9375	-0.26748	-0.00013329	4.2831	0.0021344	4.0157	0.0020011	498.3218517146112	49.805	1.7523	49.712	48.767	50.519	-0.093178					89	44	3	0	0	0	0.85439	1	3927	3927		5.6988	0	1	158970			33562	9236	22177	22187	38335	38335					0.21121111021398065
LPWRVRGLL	9	Unmodified	_LPWRVRGLL_					0	0	0			REV__ENST00000419336.6_1_7:100491185-100491476:-|nuORF	REV__ENST00000419336.6_1_7:100491185-100491476:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3531494140625	2	555.350743	1108.68693	0.85674	0.00047579	3.6725	0.0020395	4.5293	0.0025153	555.3526695275054	100.86	2.5278	101	100.46	102.99	0.14352					194	61	5	0	0	0	0.7932	1	10573	10573		25.45	7.1258	1	5097700	+		33563	26473	22178	22188	38336	38336					0.13693713976090294
LPWSGDWTDM	10	Unmodified	_LPWSGDWTDM_					0	0	0		ENSG00000105672|ENST00000402764|ETV2;nc|ENSG00000105672|O00321-2|ETV2	ENSG00000105672|ENST00000402764|ETV2	ENSG00000105672|ENST00000402764|ETV2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3663940429688	2	604.258056	1206.50156	-0.12904	-7.7973E-05	-3.8088	-0.0023015	-3.9379	-0.0023795	604.7562703379693	104.45	0.12399	104.49	104.38	104.51	0.039856					4	2	2	0	0	0	0.37624	1	11357	11357		29.15	0	1	123790			33564	2239	22179	22189	38337	38337					-0.09343101396370912
LPWSSLKRLF	10	Unmodified	_LPWSSLKRLF_					0	0	0			REV__ENST00000556702.1_1_14:65560332-65569057:-|nuORF	REV__ENST00000556702.1_1_14:65560332-65569057:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.8699340820312	2	623.868966	1245.72338	-0.065769	-4.1031E-05	2.4377	0.0015208	2.3719	0.0014798	623.8703810158217	104.89	2.4155	104.89	104.43	106.84	0					131	56	4	0	0	0	0.85466	1	10839	10839		20.947	0.95016	1	1348200	+		33565	28707	22180	22190	38338	38338					0.11034546082123597
LPWVGKELY	9	Unmodified	_LPWVGKELY_					0	0	0		ENSG00000136937|ENST00000375147|NCBP1	ENSG00000136937|ENST00000375147|NCBP1	ENSG00000136937|ENST00000375147|NCBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.809814453125	2	552.808042	1103.60153	-0.44712	-0.00024717	0.28809	0.00015926	-0.15902	-8.791E-05	552.8079959008782	69.689	0.84071	70.073	69.909	70.75	0.38416					38	23	2	0	0	0	0.64555	1	7741	7741		44.377	3.8046	1	427400			33566	4162	22181	22191	38339	38339					0.05387503999759247
LPWVGKELY	9	Unmodified	_LPWVGKELY_					0	0	0		ENSG00000136937|ENST00000375147|NCBP1	ENSG00000136937|ENST00000375147|NCBP1	ENSG00000136937|ENST00000375147|NCBP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	552.808042	1103.60153	-0.33604	-0.00018577	0.077222	4.2689E-05	-0.25882	-0.00014308	552.8078423900083	69.782	0.8302	70.328	69.972	70.802	0.54694	0.12768	-0.0001166	NaN	44.377	35	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	638160			33567	4162	22181	22191							0.05387503999759247
LPWVLPQHKH	10	Unmodified	_LPWVLPQHKH_					0	0	0		ENST00000369535.4_1_1:115250357-115250549:-|nuORF	ENST00000369535.4_1_1:115250357-115250549:-|nuORF	ENST00000369535.4_1_1:115250357-115250549:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2972717285156	3	418.90838	1253.70331	-1.8193	-0.00076213	1.5932	0.00066741	-0.22611	-9.4719E-05	418.90866869485535	71.128	0.12643	71.262	71.154	71.28	0.13357					5	4	2	0	0	0	0.37624	1	6455	6455		16.007	0	1	30221			33568	10620	22182	22192	38340	38340					0.08660795142168354
LPWVPPHLR	9	Unmodified	_LPWVPPHLR_					0	0	0		ENSG00000101997|ENST00000376227|CCDC22	ENSG00000101997|ENST00000376227|CCDC22	ENSG00000101997|ENST00000376227|CCDC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.830078125	2	557.829643	1113.64473	0.85904	0.0004792	1.1792	0.00065782	2.0383	0.001137	557.8303228390891	100.95	1.6407	101.1	100.55	102.19	0.14352					87	39	3	0	0	0	0.7932	1	10575	10575		24.203	0	1	700710			33569	1979	22183	22193	38341	38341					0.09245738567688022
LPYGCLVHG	9	Unmodified	_LPYGCLVHG_					0	0	0			REV__ENSG00000162572|ENST00000379116|SCNN1D	REV__ENSG00000162572|ENST00000379116|SCNN1D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.7870178222656	2	479.744388	957.474223	-0.045293	-2.1729E-05	2.3666	0.0011354	2.3213	0.0011136	479.7453398475592	44.862	0.33035	45.325	45.224	45.554	0.46313					12	7	2	0	0	0	0.20789	1	4126	4126		14.664	0	1	177670	+		33570	20821	22184	22194	38342	38342					-0.006215401460622161
LPYIEPHGM	9	Oxidation (M)	_LPYIEPHGM(Oxidation (M))_		LPYIEPHGM(1)		LPYIEPHGM(52)	0	0	1			REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7601928710938	2	536.760235	1071.50592	0.16624	8.9229E-05	-3.1343	-0.0016824	-2.968	-0.0015931	536.7583941729528	76.896	1.0181	77.296	76.784	77.802	0.3997					75	30	3	0	0	0	0.49378	1	8764	8764		52.299	6.3472	1	1832400	+		33571	20831	22185	22195	38343	38343		310			-0.026975921827897764
LPYIKQEEF	9	Unmodified	_LPYIKQEEF_					0	0	0		nc|ENSG00000141027|O75376-2|NCOR1;ENSG00000141027|ENST00000268712|NCOR1;ENST00000458113.6_1_17:15983677-15983818:-|nuORF	nc|ENSG00000141027|O75376-2|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.808837890625	2	583.808239	1165.60193	-1.8251	-0.0010655	2.2047	0.0012871	0.37962	0.00022163	583.8093288431887	58.972	0.86796	59.364	58.941	59.809	0.39209					46	20	3	0	0	0	0.41984	2	6211	6211;6224		56.434	10.462	1	601860			33572	4476	22186	22196	38344;38345	38344					0.02574878928930957
LPYIKQEEF	9	Unmodified	_LPYIKQEEF_					0	0	0		nc|ENSG00000141027|O75376-2|NCOR1;ENSG00000141027|ENST00000268712|NCOR1;ENST00000458113.6_1_17:15983677-15983818:-|nuORF	nc|ENSG00000141027|O75376-2|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.8062133789062	2	583.808239	1165.60193	-0.54878	-0.00032038	0.6236	0.00036406	0.074818	4.3679E-05	583.8085208997607	58.89	0.95058	59.443	59.047	59.998	0.55323					53	23	3	0	0	0	0.11055	2	6208	6208;6219		90.37	23.459	1	544230			33573	4476	22186	22196	38346;38347	38346					0.02574878928930957
LPYRRSVPTWL	11	Unmodified	_LPYRRSVPTWL_					0	0	0		ENSG00000110700|ENST00000525634|RPS13;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000534329.1_1_11:17098694-17099257:-|nuORF	ENSG00000110700|ENST00000525634|RPS13	ENSG00000110700|ENST00000525634|RPS13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.2666320800781	3	463.266345	1386.7772	-1.1306	-0.00052377	0.90373	0.00041867	-0.22687	-0.0001051	463.26673430407317	56.96	0.71424	57.356	56.985	57.699	0.39672					45	16	4	0	0	0	0.69931	1	5900	5900		31.634	6.5083	1	788660			33574	2535	22187	22197	38348	38348					0.09928718513856438
LQAALPLL	8	Unmodified	_LQAALPLL_					0	0	0			REV__ENST00000525232.5_1_8:146016635-146016902:-|nuORF	REV__ENST00000525232.5_1_8:146016635-146016902:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7750244140625	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.86791	1	2878	2878		28.254	2.8041	1	10440000	+		33575	28178	22188	22198	38349	38349					0.10712464770847419
LQAAPRGM	8	Unmodified	_LQAAPRGM_					0	0	0		ENST00000295549.8_1_2:177502248-177502497:-|nuORF	ENST00000295549.8_1_2:177502248-177502497:-|nuORF	ENST00000295549.8_1_2:177502248-177502497:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.228271484375	2	422.228905	842.443257	-0.30034	-0.00012681	-1.6211	-0.00068449	-1.9215	-0.0008113	422.22807899048587	64.416	1.0603	64.382	64.026	65.086	-0.034248					75	29	3	0	0	0	0.86791	1	6176	6176		28.254	5.2176	1	581950			33576	9720	22189	22199	38350	38350					0.01573306539683017
LQAAPRGM	8	Unmodified	_LQAAPRGM_					0	0	0		ENST00000295549.8_1_2:177502248-177502497:-|nuORF	ENST00000295549.8_1_2:177502248-177502497:-|nuORF	ENST00000295549.8_1_2:177502248-177502497:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2286071777344	2	422.228905	842.443257	-1.0391	-0.00043872	-1.0158	-0.00042889	-2.0548	-0.00086761	422.2283416890696	64.395	1.1539	64.425	64.021	65.175	0.030243					96	39	3	0	0	0	0.88915	1	5706	5706		35.201	6.9464	1	492400			33577	9720	22189	22199	38351	38351					0.01573306539683017
LQAGLELV	8	Unmodified	_LQAGLELV_					0	0	0		nc|ENSG00000146839|Q9Y493-5|ZAN;nc|ENSG00000146839|Q9Y493-4|ZAN;nc|ENSG00000146839|Q9Y493-3|ZAN;nc|ENSG00000146839|Q9Y493-6|ZAN;nc|ENSG00000146839|Q9Y493-2|ZAN;ENSG00000146839|ENST00000613979|ZAN;nc|ENSG00000146839|Q9Y493-7|ZAN	nc|ENSG00000146839|Q9Y493-5|ZAN	nc|ENSG00000146839|Q9Y493-5|ZAN	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.7518615722656	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.267	1	77.358	76.858	77.858	0.091438								0	0	0	0.29344	1	7218	7218		31.955	2.8053	1				33578	4863	22190	22200	38352	38352					0.06383284011519663
LQAGRPLLL	9	Unmodified	_LQAGRPLLL_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000023055	REV__CON__ENSEMBL:ENSBTAP00000023055	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.1852722167969	2	490.816202	979.617851	-0.68322	-0.00033533	-0.92035	-0.00045172	-1.6036	-0.00078705	490.81572612951044	74.104	0.50164	74.232	74.054	74.555	0.12711					24	20	2	0	0	0	0.20789	1	6815	6815		24.203	12.692	1	99728	+	+	33579	15962	22191	22201	38353	38353					0.127226299565109
LQAHLIPG	8	Unmodified	_LQAHLIPG_					0	0	0		chr7:23342189-23343718|54|103.09|0.9|6.83|-|0|IGF2BP3,IGF2BP3|1;ENST00000341855.4_1_7:56665180-56665615:+|nuORF;ENSG00000136231|ENST00000258729|IGF2BP3	chr7:23342189-23343718|54|103.09|0.9|6.83|-|0|IGF2BP3,IGF2BP3|1	chr7:23342189-23343718|54|103.09|0.9|6.83|-|0|IGF2BP3,IGF2BP3|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.7518615722656	2	424.75307	847.491587	0.12148	5.16E-05	-1.3322	-0.00056587	-1.2107	-0.00051427	424.75237083509853	66.591	1.0467	67.142	66.525	67.572	0.55071					64	32	3	0	0	0	0.85277	1	7255	7255		25.45	3.4903	1	363930			33580	497	22192	22202	38354	38354					0.061741234512510346
LQAILARTE	9	Unmodified	_LQAILARTE_					0	0	0			REV__nc|ENSG00000127603|O94854|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1	REV__nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2744445800781	2	507.800749	1013.58694	1.3465	0.00068374	-0.70292	-0.00035694	0.64355	0.0003268	507.80051205295194	31.87	0.55756	31.977	31.717	32.274	0.10707					18	12	2	0	0	0	0.20789	1	2212	2212		26.693	0	1	91762	+		33581	18743;29829	22193	22203	38355	38355					0.08069431851617992
LQAKKEIFV	9	Unmodified	_LQAKKEIFV_					0	0	0			REV__ENST00000577104.1_1_17:52555182-52555515:+|nuORF	REV__ENST00000577104.1_1_17:52555182-52555515:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3268432617188	2	538.329142	1074.64373	-0.54037	-0.0002909	-3.5463	-0.0019091	-4.0867	-0.0022	538.3271646052639	101.22	3.8034	101.22	100.55	104.36	0					314	93	6	0	0	0	0.76255	1	10430	10430		35.618	6.4687	1	48186000	+		33582	19187	22194	22204	38356	38356					0.10939479408125408
LQAKQPTRRI	10	Unmodified	_LQAKQPTRRI_					0	0	0		ENST00000394105.6_1_9:128111695-128112590:+|nuORF	ENST00000394105.6_1_9:128111695-128112590:+|nuORF	ENST00000394105.6_1_9:128111695-128112590:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.8724975585938	2	605.872571	1209.73059	2.969	0.0017988	-3.6283	-0.0021983	-0.65929	-0.00039945	605.8701685265158	100.36	1.5776	100.31	99.825	101.4	-0.052109					123	36	5	0	0	0	0.64457	1	10901	10901		47.657	6.8792	1	1633200			33583	11058	22195	22205	38357	38357					0.13411278682565353
LQAKQPTRRI	10	Unmodified	_LQAKQPTRRI_					0	0	0		ENST00000394105.6_1_9:128111695-128112590:+|nuORF	ENST00000394105.6_1_9:128111695-128112590:+|nuORF	ENST00000394105.6_1_9:128111695-128112590:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.8734130859375	2	605.872571	1209.73059	2.1215	0.0012854	-2.3851	-0.001445	-0.26355	-0.00015968	605.870912508801	99.925	1.6378	100.29	99.878	101.52	0.36292					110	40	4	0	0	0	0.8488	1	12112	12112		17.365	3.2278	1	1159400			33584	11058	22195	22205	38358	38358					0.13411278682565353
LQALLQGRA	9	Unmodified	_LQALLQGRA_					0	0	0			REV__ENSG00000005100|ENST00000225296|DHX33	REV__ENSG00000005100|ENST00000225296|DHX33	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.71875	2	485.295633	968.576714	0.78777	0.0003823	-1.2832	-0.00062271	-0.49538	-0.00024041	485.29495403645393	100.91	1.4367	101.05	100.33	101.77	0.14352					47	34	2	0	0	0	0.20789	1	10487	10487		16.473	0	1	331950	+		33585	16074	22196	22206	38359	38359					0.09116868917044485
LQALRSLSGT	10	Unmodified	_LQALRSLSGT_					0	0	0		ENSG00000113645|ENST00000265293|WWC1;nc|ENSG00000113645|Q8IX03-2|WWC1	ENSG00000113645|ENST00000265293|WWC1	ENSG00000113645|ENST00000265293|WWC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3038330078125	2	523.303655	1044.59276	-0.041206	-2.1563E-05	-0.13765	-7.2034E-05	-0.17886	-9.3597E-05	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.86587	1	9324	9324		29.17	3.596	1	12431000			33586	2736	22197	22207	38360	38360					0.07224530363305348
LQASAPPVPLL	11	Unmodified	_LQASAPPVPLL_					0	0	0			REV__ENST00000278968.10_3_11:117075207-117075336:+|nuORF	REV__ENST00000278968.10_3_11:117075207-117075336:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.3327026367188	2	553.334424	1104.6543	0.28517	0.0001578	-3.9073	-0.002162	-3.6221	-0.0020042	553.3321125200671	96.704	2.3133	96.935	96.395	98.708	0.23103					137	53	4	0	0	0	0.69995	1	9964	9964		31.53	1.0262	1	3367100	+		33587	24600	22198	22208	38361	38361					0.10615462062582992
LQATRPLLDRL	11	Unmodified	_LQATRPLLDRL_					0	0	0			REV__nc|ENSG00000142273|Q9ULV8-2|CBLC	REV__nc|ENSG00000142273|Q9ULV8-2|CBLC	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5976867675781	3	432.597983	1294.77212	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.66	1	107.63	107.13	108.13	-0.031487								0	0	0	0.56276	1	11937	11937		14.779	0	1		+		33588	19734	22199	22209	38362	38362					0.13652414651210165
LQATRPLLDRL	11	Unmodified	_LQATRPLLDRL_					0	0	0			REV__nc|ENSG00000142273|Q9ULV8-2|CBLC	REV__nc|ENSG00000142273|Q9ULV8-2|CBLC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5974426269531	3	432.597983	1294.77212	-1.8325	-0.00079275	2.3285	0.0010073	0.49597	0.00021455	432.598847314963	107.12	1.3043	107.16	106.63	107.93	0.036118					117	31	6	0	0	0	0.74763	1	11513	11513		15.337	0	1	10726000	+		33589	19734	22199	22209	38363	38363					0.13652414651210165
LQAVVPLP	8	Unmodified	_LQAVVPLP_					0	0	0		nc|ENSG00000149972|O94779-2|CNTN5;ENSG00000149972|ENST00000524871|CNTN5	nc|ENSG00000149972|O94779-2|CNTN5	nc|ENSG00000149972|O94779-2|CNTN5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.76458740234375	2	418.765646	835.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.362	1	33.574	33.074	34.074	0.21168								0	0	0	0.29498	1	2416	2416		26.796	5.0938	1				33590	5058	22200	22210	38364	38364					0.09240178253810427
LQCPFHEGLLC	11	Unmodified	_LQCPFHEGLLC_					0	0	0			REV__ENST00000394321.9_1_19:7591427-7598678:+|nuORF	REV__ENST00000394321.9_1_19:7591427-7598678:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.2959594726562	2	630.299201	1258.58385	0.64029	0.00040357	-4.0928	-0.0025797	-3.4525	-0.0021761	630.2965544942194	23.374	0.99222	23.435	23.057	24.05	0.060431					84	35	3	0	0	0	0.72106	1	801	801		28.081	1.3886	1	334210	+		33591	26078	22201	22211	38365	38365					-0.035099025890531266
LQCPRSTVGYE	11	Unmodified	_LQCPRSTVGYE_					0	0	0			REV__ENSG00000166025|ENST00000433060|AMOTL1	REV__ENSG00000166025|ENST00000433060|AMOTL1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.8030395507812	2	626.803162	1251.59177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.2	1	111.31	110.81	111.81	0.11118								0	0	0	0.56276	1	11976	11976		22.58	3.2197	1		+		33592	21245	22202	22212	38366	38366					-0.023960520679338515
LQCVRKRLLH	10	Unmodified	_LQCVRKRLLH_					0	0	0		nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:32002284-32014401:+|nuORF	nc|ENSG00000198089|A8K8P3-4|SFI1	nc|ENSG00000198089|A8K8P3-4|SFI1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7517395019531	3	422.592286	1264.75503	-0.37505	-0.0001585	0.9992	0.00042225	0.62414	0.00026376	422.59265396732434	75.239	0.32223	75.193	75.059	75.381	-0.045982					9	7	2	0	0	0	0.37624	1	7433	7433		20.837	11.475	1	25015			33593	8237	22203	22213	38367	38367					0.13324215564421138
LQDIEKDVVIW	11	Unmodified	_LQDIEKDVVIW_					0	0	0		nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7;ENSG00000083223|ENST00000375963|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7	nc|ENSG00000083223|Q5VYS8-4|TUT7	nc|ENSG00000083223|Q5VYS8-4|TUT7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.5836486816406	3	453.250249	1356.72892	0.7922	0.00035907	-2.7078	-0.0012273	-1.9156	-0.00086826	453.24893502220635	24.05	1.229	24.007	23.603	24.832	-0.043221					89	31	4	0	0	0	0.74405	1	902	902		23.378	1.5975	1	177000			33594	1499	22204	22214	38368	38368					0.06482180083276035
LQDQLGLPTIM	11	Unmodified	_LQDQLGLPTIM_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	410.22186279296875	3	410.225046	1227.65331	0.034876	1.4307E-05	-4.467	-0.0018325	-4.4321	-0.0018182	410.22312463603447	23.2	0.4737	23.294	23.081	23.555	0.094501					41	22	2	0	0	0	0.69071	1	732	732		33.039	2.4705	1	123240	+		33595	29959	22205	22215	38369	38369					0.04858879631342461
LQDRRHLLL	9	Unmodified	_LQDRRHLLL_					0	0	0		chr19:4558489-4579118|30|10.87|0.11|6.59|-|1|SEMA6B,None|1	chr19:4558489-4579118|30|10.87|0.11|6.59|-|1|SEMA6B,None|1	chr19:4558489-4579118|30|10.87|0.11|6.59|-|1|SEMA6B,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3535766601562	2	582.354014	1162.69348	0.75692	0.00044079	-1.142	-0.00066503	-0.38505	-0.00022424	582.3532376593708	103.08	2.584	103.3	103	105.58	0.22556					189	68	3	0	0	0	0.69624	1	12666	12666		40.778	3.6191	1	7736200			33596	279	22206	22216	38370	38370					0.11863607136797327
LQECHWWRRDW	11	Unmodified	_LQECHWWRRDW_					0	0	0		ENST00000368192.8_1_1:157095491-157095569:-|nuORF	ENST00000368192.8_1_1:157095491-157095569:-|nuORF	ENST00000368192.8_1_1:157095491-157095569:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3265380859375	3	538.91761	1613.731	0.079085	4.262E-05	1.4347	0.00077318	1.5138	0.0008158	538.9193461285366	100.67	0.3621	100.88	100.73	101.09	0.21511					14	8	3	0	0	0	0.18238	1	10555	10555		5.6988	2.0797	1	60406			33597	10584	22207	22217	38371	38371					-0.05131669659931504
LQECLKPKKPV	11	Unmodified	_LQECLKPKKPV_					0	0	0		nc|ENSG00000124226|Q9Y508-2|RNF114;ENSG00000124226|ENST00000244061|RNF114	nc|ENSG00000124226|Q9Y508-2|RNF114	nc|ENSG00000124226|Q9Y508-2|RNF114	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8817749023438	2	641.881216	1281.74788	-1.1528	-0.00073997	3.0376	0.0019498	1.8848	0.0012098	641.8829970841505	95.709	2.5048	95.911	94.329	96.834	0.20242					216	59	5	0	0	0	0.72106	1	9713	9713		28.081	2.0181	1	1922900			33598	3322	22208	22218	38372	38372					0.1182743817332721
LQEDLYSVPQ	10	Unmodified	_LQEDLYSVPQ_					0	0	0		ENST00000422642.6_2_10:30987145-31001569:+|nuORF	ENST00000422642.6_2_10:30987145-31001569:+|nuORF	ENST00000422642.6_2_10:30987145-31001569:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.7169189453125	2	596.298236	1190.58192	0.86853	0.0005179	3.2552	0.0019411	4.1238	0.002459	596.2992587883232	27.055	0.2414	27.083	26.883	27.124	0.02817					13	11	2	0	0	0	0.37624	1	1048	1048		26.693	6.6961	1	56116			33599	11482	22209	22219	38373	38373					-0.005749168016563999
LQEELRDPE	9	Unmodified	_LQEELRDPE_					0	0	0			REV__ENSG00000167646|ENST00000524407|DNAAF3	REV__ENSG00000167646|ENST00000524407|DNAAF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.7772216796875	2	564.78021	1127.54587	-0.68222	-0.0003853	-0.18416	-0.00010401	-0.86638	-0.00048931	564.779949211733	47.886	0.51199	48.355	48.156	48.668	0.46941					21	12	2	0	0	0	0.20789	1	4622	4622		15.642	0	1	328560	+		33600	21410	22210	22220	38374	38374					-0.01280373978534044
LQEGPLLHLT	10	Unmodified	_LQEGPLLHLT_					0	0	0			REV__nc|ENSG00000150712|Q9C0I1-3|MTMR12	REV__nc|ENSG00000150712|Q9C0I1-3|MTMR12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8201904296875	2	560.821681	1119.62881	-0.54677	-0.00030664	-2.8297	-0.001587	-3.3765	-0.0018936	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.78666	1	9117	9117		40.058	0.80534	1	408930	+		33601	20218	22211	22221	38375	38375					0.07377987540144204
LQEGSPQTP	9	Unmodified	_LQEGSPQTP_					0	0	0		nc|ENSG00000137802|O60336-2|MAPKBP1;nc|ENSG00000137802|O60336-3|MAPKBP1;ENSG00000137802|ENST00000457542|MAPKBP1;nc|ENSG00000137802|O60336|MAPKBP1;nc|ENSG00000137802|O60336-4|MAPKBP1;ENST00000502695.1_1_15:42114172-42114769:+|nuORF;ENST00000506301.1_1_15:42114172-42114999:+|nuORF;ENST00000505061.5_1_15:42111671-42117631:+|nuORF	nc|ENSG00000137802|O60336-2|MAPKBP1	nc|ENSG00000137802|O60336-2|MAPKBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.736083984375	2	478.737814	955.461075	0.56453	0.00027026	-3.5236	-0.0016869	-2.9591	-0.0014166	478.7360434706385	78.907	1.1045	79.318	78.929	80.034	0.4106					57	25	4	0	0	0	0.64555	1	9012	9012		44.377	1.9027	1	847080			33602	4235	22212	22222	38376	38376					-0.018436997244748454
LQEIADLKTAK	11	Unmodified	_LQEIADLKTAK_					0	0	0		nc|ENSG00000176049|Q96AA8-4|JAKMIP2;nc|ENSG00000176049|Q96AA8-2|JAKMIP2;nc|ENSG00000176049|Q96AA8|JAKMIP2;ENSG00000176049|ENST00000616793|JAKMIP2	nc|ENSG00000176049|Q96AA8-4|JAKMIP2	nc|ENSG00000176049|Q96AA8-4|JAKMIP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	615.35888671875	2	615.358628	1228.7027	-0.11045	-6.7968E-05	-1.7294	-0.0010642	-1.8399	-0.0011322	615.3576279299549	104.87	2.2143	104.87	104.31	106.53	0					144	52	4	0	0	0	0.67778	1	10790	10790		35.152	0	1	1478900			33603	7052	22213	22223	38377	38377					0.09749910911796178
LQEIEIAMTE	10	Unmodified	_LQEIEIAMTE_					0	0	0			REV__ENST00000467635.6_1_17:28804451-28817236:+|nuORF	REV__ENST00000467635.6_1_17:28804451-28817236:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	588.79541015625	2	588.794472	1175.57439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.981	1	20.916	20.416	21.416	-0.064743								0	0	0	0.45132	1	575	575		24.519	1.4767	1		+		33604	17723	22214	22224	38378	38378					-0.006373923935825587
LQEKGHSE	8	Unmodified	_LQEKGHSE_					0	0	0		ENST00000505229.1_1_5:176333010-176334187:-|nuORF	ENST00000505229.1_1_5:176333010-176334187:-|nuORF	ENST00000505229.1_1_5:176333010-176334187:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25384521484375	2	464.230156	926.445759	-1.1684	-0.00054242	-2.8836	-0.0013386	-4.052	-0.0018811	464.2268421028978	85.268	0.13116	85.268	85.184	85.315	0					4	2	2	0	0	0	0.4196	1	8064	8064		27.882	14.107	1	16604			33605	12920	22215	22225	38379	38379					-0.02040566521668552
LQELAPII	8	Unmodified	_LQELAPII_					0	0	0		nc|ENSG00000082438|Q53SF7-3|COBLL1;ENSG00000082438|ENST00000652658|COBLL1;nc|ENSG00000082438|Q53SF7-2|COBLL1	nc|ENSG00000082438|Q53SF7-3|COBLL1	nc|ENSG00000082438|Q53SF7-3|COBLL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.7772216796875	2	448.776211	895.537869	-1.4107	-0.00063308	4.4433	0.0019941	3.0326	0.001361	448.7781260236316	72.302	1.1681	72.302	71.823	72.992	0					77	49	2	0	0	0	0.83466	1	6479	6479		23.037	3.6767	1	136900			33606	14790	22216	22226	38380	38380					0.08592143562668753
LQELQKLQPEA	11	Unmodified	_LQELQKLQPEA_					0	0	0		L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|137|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|137|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|137|3|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3931884765625	2	648.861534	1295.70852	-0.0023389	-1.5176E-06	3.2853	0.0021317	3.2829	0.0021302	649.3655368535806	107.12	0.72143	107.09	106.73	107.45	-0.034401					27	16	2	0	0	0	0.17376	1	11697	11697		40.058	0	1	807960			33607	14677	22217	22227	38381	38381					0.07249009423503594
LQELSHNADKY	11	Unmodified	_LQELSHNADKY_					0	0	0		nc|ENSG00000176124|O43261|DLEU1	nc|ENSG00000176124|O43261|DLEU1	nc|ENSG00000176124|O43261|DLEU1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	439.88616943359375	3	439.88597	1316.63608	0.053114	2.3364E-05	0.086758	3.8164E-05	0.13987	6.1528E-05	439.8859982422307	32.365	1.412	32.376	31.72	33.132	0.010902					125	37	5	0	0	0	0.40952	2	1833	1833;1842		58.63	25.879	1	1046100			33608	15111	22218	22228	38382;38383	38382					-0.009573246500849564
LQENTVSIF	9	Unmodified	_LQENTVSIF_					0	0	0		nc|ENSG00000176601|Q56UN5-3|MAP3K19;ENSG00000176601|ENST00000392915|MAP3K19;nc|ENSG00000176601|Q56UN5-4|MAP3K19;nc|ENSG00000176601|Q56UN5-5|MAP3K19;nc|ENSG00000176601|Q56UN5-7|MAP3K19	nc|ENSG00000176601|Q56UN5-3|MAP3K19	nc|ENSG00000176601|Q56UN5-3|MAP3K19	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3610229492188	2	525.776939	1049.53933	1.6582	0.00087186	3.783	0.001989	5.4413	0.0028609	526.281097309864	35.949	0.39334	36.39	36.222	36.615	0.44043					12	9	2	0	0	0	0.20789	1	2821	2821		49.442	5.3247	1	139570			33609	7090	22219	22229	38384	38384					0.016537328607682866
LQERVHEI	8	Unmodified	_LQERVHEI_					0	0	0		ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.282958984375	2	512.282723	1022.55089	-1.5312	-0.00078441	-1.1667	-0.00059769	-2.6979	-0.0013821	512.2820384248688	86.195	3.9563	86.353	85.285	89.241	0.15851					164	92	2	0	0	0	0.90523	1	8365	8365		40.778	0	1	356130			33610	6335	22220	22230	38385	38385					0.0405197467475773
LQEVVRKPRAS	11	Unmodified	_LQEVVRKPRAS_					0	0	0		ENSG00000167987|ENST00000301765|VPS37C	ENSG00000167987|ENST00000301765|VPS37C	ENSG00000167987|ENST00000301765|VPS37C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8820190429688	2	641.883136	1281.75172	-0.050098	-3.2157E-05	-0.96956	-0.00062234	-1.0197	-0.0006545	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.50531	1	10252	10252		51.528	10.101	1	3644700			33611	6351	22221	22231	38386	38386					0.12211243991418996
LQEVVRKPRAS	11	Unmodified	_LQEVVRKPRAS_					0	0	0		ENSG00000167987|ENST00000301765|VPS37C	ENSG00000167987|ENST00000301765|VPS37C	ENSG00000167987|ENST00000301765|VPS37C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8822021484375	2	641.883136	1281.75172	2.2004	0.0014124	-3.2914	-0.0021127	-1.091	-0.0007003	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.66009	1	10525	10525		37.508	1.0614	1	3624200			33612	6351	22221	22231	38387	38387					0.12211243991418996
LQEVVRKPRAS	11	Unmodified	_LQEVVRKPRAS_					0	0	0		ENSG00000167987|ENST00000301765|VPS37C	ENSG00000167987|ENST00000301765|VPS37C	ENSG00000167987|ENST00000301765|VPS37C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8824462890625	2	641.883136	1281.75172	1.5974	0.0010254	-2.7094	-0.0017391	-1.112	-0.00071377	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.68532	1	10018	10018		33.922	2.3918	1	4266200			33613	6351	22221	22231	38388	38388					0.12211243991418996
LQEVVRKPRAS	11	Unmodified	_LQEVVRKPRAS_					0	0	0		ENSG00000167987|ENST00000301765|VPS37C	ENSG00000167987|ENST00000301765|VPS37C	ENSG00000167987|ENST00000301765|VPS37C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8826293945312	2	641.883136	1281.75172	0.91411	0.00058675	-1.9967	-0.0012817	-1.0826	-0.00069492	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.69248	1	10064	10064		32.751	1.2207	1	4136300			33614	6351	22221	22231	38389	38389					0.12211243991418996
LQEVVRKPRAS	11	Unmodified	_LQEVVRKPRAS_					0	0	0		ENSG00000167987|ENST00000301765|VPS37C	ENSG00000167987|ENST00000301765|VPS37C	ENSG00000167987|ENST00000301765|VPS37C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8822631835938	2	641.883136	1281.75172	-1.1529	-0.00074004	0.033515	2.1513E-05	-1.1194	-0.00071853	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.69931	1	10036	10036		31.634	3.752	1	3521600			33615	6351	22221	22231	38390	38390					0.12211243991418996
LQEWLKMFQSW	11	Unmodified	_LQEWLKMFQSW_					0	0	0		ENSG00000109670|ENST00000281708|FBXW7;nc|ENSG00000109670|Q969H0-4|FBXW7;nc|ENSG00000109670|Q969H0-2|FBXW7	ENSG00000109670|ENST00000281708|FBXW7	ENSG00000109670|ENST00000281708|FBXW7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	499.2491149902344	3	499.251595	1494.73296	-0.72196	-0.00036044	-0.99147	-0.00049499	-1.7134	-0.00085543	499.2509582793171	47.122	0.63241	47.095	46.766	47.398	-0.026737					33	16	3	0	0	0	0.76087	1	3910	3910		19.627	1.0959	1	193140			33616	2473	22222	22232	38391	38391					0.005379463053486688
LQEYGLLQR	9	Unmodified	_LQEYGLLQR_					0	0	0		ENSG00000196453|ENST00000247930|ZNF777;nc|ENSG00000291118|Q75MW2-2|ZNF767P;ENST00000472212.5_1_7:149318233-149321683:-|nuORF;ENST00000483892.5_1_7:148845372-148863263:+|nuORF;nc|ENSG00000291118|Q75MW2|ZNF767P;ENST00000463567.5_1_7:149255903-149321683:-|nuORF;nc|ENSG00000170265|Q9UDV7-2|ZNF282;ENSG00000170260|ENST00000335870|ZNF212;ENSG00000170265|ENST00000610704|ZNF282;ENSG00000197024|ENST00000475153|ZNF398;nc|ENSG00000181220|Q6NUN9|ZNF746;nc|ENSG00000181220|Q6NUN9-2|ZNF746;ENSG00000181220|ENST00000458143|ZNF746;nc|ENSG00000204946|Q6ZMS7-1|ZNF783;ENSG00000204946|ENST00000434415|ZNF783	ENSG00000196453|ENST00000247930|ZNF777;ENSG00000197024|ENST00000475153|ZNF398;nc|ENSG00000181220|Q6NUN9|ZNF746;nc|ENSG00000204946|Q6ZMS7-1|ZNF783	nc|ENSG00000181220|Q6NUN9|ZNF746	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3400268554688	2	560.31148	1118.60841	0.86155	0.00048274	-2.9181	-0.001635	-2.0565	-0.0011523	560.8136462617343	101.99	0.16692	102.13	101.98	102.15	0.13523					6	3	2	0	0	0	0.20789	1	10703	10703		56.721	28.64	1	146830			33617	8125;7376;8057;8500	22223	22233	38392	38392					0.053848168803369845
LQEYRAKQSK	10	Unmodified	_LQEYRAKQSK_					0	0	0		nc|ENSG00000132321|Q86XH1-2|IQCA1;nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1	nc|ENSG00000132321|Q86XH1-2|IQCA1	nc|ENSG00000132321|Q86XH1-2|IQCA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.5667724609375	3	417.566571	1249.67788	1.0829	0.00045217	-0.83306	-0.00034786	0.2498	0.00010431	417.56618935661135	36.21	0.97444	36.492	36.077	37.052	0.28173					69	23	4	0	0	0	0.8545	1	2840	2840		27.644	2.5179	1	3475800			33618	3780	22224	22234	38393	38393					0.06303275829077393
LQFAMKRLLP	10	Unmodified	_LQFAMKRLLP_					0	0	0		nc|ENSG00000141644|Q9UIS9-8|MBD1;nc|ENSG00000141644|Q9UIS9-6|MBD1;nc|ENSG00000141644|Q9UIS9-5|MBD1;nc|ENSG00000141644|Q9UIS9-10|MBD1;nc|ENSG00000141644|Q9UIS9-2|MBD1;ENSG00000141644|ENST00000269468|MBD1;nc|ENSG00000141644|Q9UIS9-9|MBD1;nc|ENSG00000141644|Q9UIS9-12|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2497253417969	3	406.246005	1215.71618	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.83	1	118.81	118.31	119.31	-0.024208								0	0	0	0.45132	1	13167	13167		16.717	0.71061	1				33619	4520	22225	22235	38394	38394					0.11695490210058779
LQFAMKRLLP	10	Unmodified	_LQFAMKRLLP_					0	0	0		nc|ENSG00000141644|Q9UIS9-8|MBD1;nc|ENSG00000141644|Q9UIS9-6|MBD1;nc|ENSG00000141644|Q9UIS9-5|MBD1;nc|ENSG00000141644|Q9UIS9-10|MBD1;nc|ENSG00000141644|Q9UIS9-2|MBD1;ENSG00000141644|ENST00000269468|MBD1;nc|ENSG00000141644|Q9UIS9-9|MBD1;nc|ENSG00000141644|Q9UIS9-12|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	nc|ENSG00000141644|Q9UIS9-8|MBD1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2481689453125	3	406.246005	1215.71618	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.42	1	115.44	114.94	115.94	0.026466								0	0	0	0.45132	1	12660	12660		21.686	0.8486	1				33620	4520	22225	22235	38395	38395					0.11695490210058779
LQFIRKLYSK	10	Unmodified	_LQFIRKLYSK_					0	0	0			REV__ENSG00000003393|ENST00000264276|ALS2	REV__ENSG00000003393|ENST00000264276|ALS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3944702148438	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.86348	1	12805	12805		31.53	4.4825	1	2297700	+		33621	16050	22226	22236	38396	38396					0.14054504144928615
LQFKAKIL	8	Unmodified	_LQFKAKIL_					0	0	0			REV__ENSG00000109063|ENST00000583535|MYH3	REV__ENSG00000109063|ENST00000583535|MYH3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.8009948730469	2	480.81567	959.616788	2.067	0.00099384	-2.7083	-0.0013022	-0.64131	-0.00030835	480.814022764716	95.631	0.42575	95.573	95.51	95.936	-0.057526					10	9	2	0	0	0	0.4196	1	10246	10246		4.3163	0	1	47272	+		33622	17744	22227	22237	38397	38397					0.13536415587611828
LQFLLVFLC	9	Unmodified	_LQFLLVFLC_					0	0	0		ENSG00000036828|ENST00000639785|CASR;nc|ENSG00000036828|P41180-2|CASR	ENSG00000036828|ENST00000639785|CASR	ENSG00000036828|ENST00000639785|CASR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3186645507812	2	548.317189	1094.61982	-0.46378	-0.0002543	2.562	0.0014048	2.0982	0.0011505	548.3184669915545	109.38	0.36529	109.38	109.26	109.62	0					29	18	2	0	0	0	0.7932	1	11368	11368		25.45	0	1	1624200			33623	906	22228	22238	38398	38398					0.07629922650107801
LQFLLVVLFGF	11	Unmodified	_LQFLLVVLFGF_					0	0	0			REV__ENST00000466324.1_1_11:64444212-64481216:-|nuORF	REV__ENST00000466324.1_1_11:64444212-64481216:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3930053710938	2	648.391742	1294.76893	-1.1411	-0.00073988	2.087	0.0013532	0.94594	0.00061334	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75495	1	12446	12446		20.947	2.6848	1	2297700	+		33624	27126	22229	22239	38399	38399					0.13333771544489537
LQFRRASWGL	10	Unmodified	_LQFRRASWGL_					0	0	0		ENST00000472437.5_1_3:69812804-69928374:+|nuORF	ENST00000472437.5_1_3:69812804-69928374:+|nuORF	ENST00000472437.5_1_3:69812804-69928374:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.58416748046875	3	411.899885	1232.67783	1.585	0.00065286	-1.6662	-0.00068629	-0.081146	-3.3424E-05	411.8992485040986	21.555	0.24257	21.112	20.992	21.235	-0.44324					9	5	2	0	0	0	0.37624	1	777	777		28.081	6.3957	1	34512			33625	12262	22230	22240	38400	38400					0.07079320619732243
LQFVHMVR	8	Unmodified	_LQFVHMVR_					0	0	0		nc|ENSG00000151490|Q16827-4|PTPRO;nc|ENSG00000151490|Q16827-3|PTPRO;nc|ENSG00000151490|Q16827-2|PTPRO;ENSG00000151490|ENST00000281171|PTPRO	nc|ENSG00000151490|Q16827-4|PTPRO	nc|ENSG00000151490|Q16827-4|PTPRO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.32177734375	2	515.286754	1028.55896	-0.32188	-0.00016586	2.1516	0.0011087	1.8297	0.00094284	515.2883746838509	28.093	0.38705	27.996	27.752	28.139	-0.096947					13	8	2	0	0	0	0.4196	1	1686	1686		18.324	0	1	54876			33626	5121	22231	22241	38401	38401					0.04581830390520736
LQGEFFLF	8	Unmodified	_LQGEFFLF_					0	0	0		ENSG00000163376|ENST00000417314|KBTBD8	ENSG00000163376|ENST00000417314|KBTBD8	ENSG00000163376|ENST00000417314|KBTBD8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.7748107910156	2	500.760561	999.506569	-0.69045	-0.00034575	-3.0118	-0.0015082	-3.7022	-0.0018539	500.75887364435454	49.404	0.73626	49.864	49.419	50.155	0.45983					35	17	3	0	0	0	0.4196	1	4787	4787		26.796	1.3459	1	435850			33627	5790	22232	22242	38402	38402					0.006795705285753684
LQGKVILNPG	10	Unmodified	_LQGKVILNPG_					0	0	0		ENST00000574306.1_1_17:1616769-1616883:-|nuORF	ENST00000574306.1_1_17:1616769-1616883:-|nuORF	ENST00000574306.1_1_17:1616769-1616883:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8180541992188	2	519.818941	1037.62333	0.62872	0.00032682	-1.9112	-0.00099348	-1.2825	-0.00066665	519.8178355105972	96.042	1.6829	96.446	95.572	97.255	0.40451					106	40	3	0	0	0	0.6116	2	11546	11546;11569		49.442	1.7842	1	1896000			33628	14034	22233	22243	38403;38404	38403					0.10602308748320866
LQGLAFIHK	9	Unmodified	_LQGLAFIHK_					0	0	0		nc|ENSG00000111837|P20794-3|MAK;nc|ENSG00000111837|P20794|MAK;ENSG00000111837|ENST00000354489|MAK;nc|ENSG00000112144|Q9UPZ9-2|CILK1;ENSG00000112144|ENST00000676107|CILK1	nc|ENSG00000111837|P20794-3|MAK	nc|ENSG00000111837|P20794-3|MAK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8099365234375	2	513.808377	1025.6022	-1.3833	-0.00071076	2.6514	0.0013623	1.2681	0.00065157	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.78983	1	4386	4386		27.882	3.6795	1	1148600			33629	2615	22234	22244	38405	38405					0.0904234343945518
LQGLAFIHK	9	Unmodified	_LQGLAFIHK_					0	0	0		nc|ENSG00000111837|P20794-3|MAK;nc|ENSG00000111837|P20794|MAK;ENSG00000111837|ENST00000354489|MAK;nc|ENSG00000112144|Q9UPZ9-2|CILK1;ENSG00000112144|ENST00000676107|CILK1	nc|ENSG00000111837|P20794-3|MAK	nc|ENSG00000111837|P20794-3|MAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8096313476562	2	513.808377	1025.6022	-0.38547	-0.00019806	1.7192	0.00088333	1.3337	0.00068527	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.7932	1	4043	4043		16.473	2.6978	1	1377600			33630	2615	22234	22244	38406	38406					0.0904234343945518
LQGLAVPIC	9	Unmodified	_LQGLAVPIC_					0	0	0		ENST00000508797.1_1_5:179035408-179036813:+|nuORF	ENST00000508797.1_1_5:179035408-179036813:+|nuORF	ENST00000508797.1_1_5:179035408-179036813:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.263916015625	2	457.262413	912.510274	0.89563	0.00040954	3.5919	0.0016424	4.4875	0.002052	457.26393331241866	95.103	1.606	95.149	94.704	96.31	0.046188					81	37	5	0	0	0	0.77546	1	10046	10046		31.955	2.1133	1	993260			33631	12980	22235	22245	38407	38407					0.05051917030766617
LQGLLGLL	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LQGLLGLL_					1	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1;ENST00000409459.5_1_11:95578283-95578316:-|nuORF	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7793884277344	2	434.778754	867.542954	-1.2494	-0.00054321	3.5325	0.0015359	2.2831	0.00099266	434.7801616022163	41.477	1.7868	41.436	40.922	42.709	-0.04081					147	45	4	0	0	0	0.92176	1	3093	3093		46.766	6.1938	1	2800900			33632	8803	22236	22246	38408	38408					0.10388447425282266
LQGLLGLL	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LQGLLGLL_					1	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1;ENST00000409459.5_1_11:95578283-95578316:-|nuORF	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77960205078125	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.94132	1	3180	3180		54.765	15.743	1	2766200			33633	8803	22236	22246	38409	38409					0.10388447425282266
LQGLLGLL	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LQGLLGLL_					1	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1;ENST00000409459.5_1_11:95578283-95578316:-|nuORF	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77984619140625	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.9159	1	3489	3489		44.531	7.5026	1	2833200			33634	8803	22236	22246	38410	38410					0.10388447425282266
LQGLLGLL	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LQGLLGLL_					1	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1;ENST00000409459.5_1_11:95578283-95578316:-|nuORF	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7780456542969	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.9159	1	3439	3439		44.531	11.015	1	15771000			33635	8803	22236	22246	38411	38411					0.10388447425282266
LQGPRGLRGLP	11	Unmodified	_LQGPRGLRGLP_					0	0	0		ENSG00000092758|ENST00000649368|COL9A3	ENSG00000092758|ENST00000649368|COL9A3	ENSG00000092758|ENST00000649368|COL9A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353759765625	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.6921	1	12203	12203		32.812	0	1	3937500			33636	1702	22237	22247	38412	38412					0.11863607136797327
LQGRVRGG	8	Unmodified	_LQGRVRGG_					0	0	0		ENST00000485071.2_1_7:100170790-100171357:-|nuORF	ENST00000485071.2_1_7:100170790-100171357:-|nuORF	ENST00000485071.2_1_7:100170790-100171357:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7511291503906	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.662	1	75.708	75.208	76.208	0.045959								0	0	0	0.2946	1	7280	7280		52.299	4.3836	1				33637	12548	22238	22248	38413	38413					0.06114873397245901
LQGSLVKTLF	10	Unmodified	_LQGSLVKTLF_					0	0	0			REV__ENST00000377304.6_1_10:18834706-18834850:-|nuORF	REV__ENST00000377304.6_1_10:18834706-18834850:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3323974609375	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.86471	1	9847	9847		30.318	0	1	2365500	+		33638	25865	22239	22249	38414	38414					0.10615462062560255
LQGTHRRF	8	Unmodified	_LQGTHRRF_					0	0	0		ENST00000487854.1_1_8:139626161-139632292:-|nuORF	ENST00000487854.1_1_8:139626161-139632292:-|nuORF	ENST00000487854.1_1_8:139626161-139632292:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.7926025390625	2	507.783225	1013.5519	-0.57995	-0.00029449	-0.72824	-0.00036979	-1.3082	-0.00066428	507.7828241702168	31.555	0.51432	31.635	31.384	31.899	0.079836					17	11	2	0	0	0	0.4196	1	2123	2123		19.36	3.7182	1	155510			33639	12610	22240	22250	38415	38415					0.04566233834327704
LQGVYIATLI	10	Unmodified	_LQGVYIATLI_					0	0	0		ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF	ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.828125	2	545.828975	1089.6434	-0.57663	-0.00031474	-0.033697	-1.8393E-05	-0.61033	-0.00033313	545.8288028912038	60.116	1.1634	60.148	59.766	60.929	0.032822					87	32	4	0	0	0	0.70553	1	5621	5621		44.377	1.5129	1	1445500			33640	4219	22241	22251	38416	38416					0.10216059688286805
LQHIPVLPQ	9	Unmodified	_LQHIPVLPQ_					0	0	0		ENST00000429300.5_1_22:18905996-18910521:-|nuORF	ENST00000429300.5_1_22:18905996-18910521:-|nuORF	ENST00000429300.5_1_22:18905996-18910521:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3153076171875	2	522.813659	1043.61277	-0.2576	-0.00013468	1.6122	0.00084287	1.3546	0.0007082	523.3161813014118	38.894	1.1874	39.235	38.896	40.084	0.34187					41	27	3	0	0	0	0.58151	1	3239	3239		47.916	1.9636	1	375800			33641	11608	22242	22252	38417	38417					0.09270326093883341
LQICSPVF	8	Unmodified	_LQICSPVF_					0	0	0			REV__ENSG00000155096|ENST00000337198|AZIN1	REV__ENSG00000155096|ENST00000337198|AZIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.7406005859375	2	453.741314	905.468075	-0.28366	-0.00012871	4.1452	0.0018808	3.8615	0.0017521	453.74329314120644	32.416	0.47495	32.362	32.198	32.673	-0.05434					15	10	2	0	0	0	0.89494	1	1921	1921		37.159	1.9584	1	24162	+		33642	20416	22243	22253	38418	38418					0.011559416224031338
LQIFIRRPI	9	Unmodified	_LQIFIRRPI_					0	0	0			REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	578.373779296875	2	578.371675	1154.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.696	1	50.703	50.203	51.203	0.0077438								0	0	0	0.32159	1	4338	4338		23.042	5.6775	1		+		33643	22893	22244	22254	38419	38419					0.1576226966460581
LQIGPLKKSCI	11	Unmodified	_LQIGPLKKSCI_					0	0	0		nc|ENSG00000132481|Q96LD4-2|TRIM47;ENST00000587339.2_2_17:73870566-73874273:-|nuORF;ENSG00000132481|ENST00000254816|TRIM47	nc|ENSG00000132481|Q96LD4-2|TRIM47	nc|ENSG00000132481|Q96LD4-2|TRIM47	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.9162902832031	3	400.577531	1198.71076	3.1805	0.001274	3.9397	0.0015782	7.1202	0.0028522	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.74771	1	12499	12499		22.562	2.5311	1	4827300			33644	3801	22245	22255	38420	38420					0.11935766627584599
LQIGPLKKSCI	11	Unmodified	_LQIGPLKKSCI_					0	0	0		nc|ENSG00000132481|Q96LD4-2|TRIM47;ENST00000587339.2_2_17:73870566-73874273:-|nuORF;ENSG00000132481|ENST00000254816|TRIM47	nc|ENSG00000132481|Q96LD4-2|TRIM47	nc|ENSG00000132481|Q96LD4-2|TRIM47	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5809020996094	3	400.577531	1198.71076	3.4048	0.0013639	3.7899	0.0015182	7.1947	0.002882	400.578997947783	111.61	0.85251	111.65	111	111.85	0.041832					50	28	2	0	0	0	0.67762	1	13500	13500		35.178	8.1309	1	3662700			33645	3801	22245	22255	38421	38421					0.11935766627584599
LQIGPLKKSCI	11	Unmodified	_LQIGPLKKSCI_					0	0	0		nc|ENSG00000132481|Q96LD4-2|TRIM47;ENST00000587339.2_2_17:73870566-73874273:-|nuORF;ENSG00000132481|ENST00000254816|TRIM47	nc|ENSG00000132481|Q96LD4-2|TRIM47	nc|ENSG00000132481|Q96LD4-2|TRIM47	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	400.577531	1198.71076	-1.9294	-0.00077288	10.297	0.0041247	8.3674	0.0033518	400.58100230024536	111.72	0.16179	111.7	111.61	111.78	-0.01989	-0.03114	0.0047635	NaN	35.178	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11844			33646	3801	22245	22255							0.11935766627584599
LQIILEVV	8	Unmodified	_LQIILEVV_					0	0	0		ENSG00000151012|ENST00000280612|SLC7A11	ENSG00000151012|ENST00000280612|SLC7A11	ENSG00000151012|ENST00000280612|SLC7A11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.7995300292969	2	463.799686	925.584819	-1.356	-0.00062891	2.7368	0.0012693	1.3808	0.00064042	463.8008126700971	41.516	1.4901	41.52	41.125	42.615	0.003418					87	36	3	0	0	0	0.82419	1	3055	3055		13.775	0	1	533600			33647	5089	22246	22256	38422	38422					0.11905003113804469
LQILKMENK	9	Unmodified	_LQILKMENK_					0	0	0		ENSG00000138823|ENST00000265517|MTTP	ENSG00000138823|ENST00000265517|MTTP	ENSG00000138823|ENST00000265517|MTTP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.36181640625	2	558.825909	1115.63727	0.30752	0.00017185	-2.8165	-0.0015739	-2.5089	-0.0014021	558.8243069506746	79.378	0.63791	79.794	79.53	80.168	0.41621					26	14	2	0	0	0	0.20789	1	9136	9136		32.812	4.9302	1	289140			33648	4339	22247	22257	38423	38423					0.08407218185107013
LQILLGEP	8	Unmodified	_LQILLGEP_					0	0	0		ENST00000503766.5_1_6:43190510-43190918:+|nuORF	ENST00000503766.5_1_6:43190510-43190918:+|nuORF	ENST00000503766.5_1_6:43190510-43190918:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78802490234375	2	441.768386	881.522219	-0.057774	-2.5523E-05	-3.4149	-0.0015086	-3.4727	-0.0015341	441.7665452705188	38.973	0.19238	38.921	38.775	38.967	-0.052731					7	5	2	0	0	0	0.4196	1	2340	2340		24.203	4.8428	1	36647			33649	12892	22248	22258	38424	38424					0.07671857045613706
LQILPATG	8	Unmodified	_LQILPATG_					0	0	0		ENSG00000137812|ENST00000399668|KNL1;nc|ENSG00000137812|Q8NG31|KNL1;nc|ENSG00000137812|Q8NG31-3|KNL1;nc|ENSG00000137812|Q8NG31-4|KNL1;ENST00000533001.1_1_15:40886490-40917961:+|nuORF	ENSG00000137812|ENST00000399668|KNL1	ENSG00000137812|ENST00000399668|KNL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.72900390625	2	406.747453	811.480354	-0.24577	-9.9966E-05	4.2164	0.001715	3.9706	0.001615	406.7489220138212	76.285	0.69077	76.237	75.95	76.641	-0.048264					25	20	2	0	0	0	0.4196	1	7575	7575		21.96	0	1	37465			33650	4238	22249	22259	38425	38425					0.06707301357096185
LQIRGNVSA	9	Unmodified	_LQIRGNVSA_					0	0	0			REV__ENST00000391998.3_1_19:53982744-53982942:+|nuORF	REV__ENST00000391998.3_1_19:53982744-53982942:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2774658203125	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.64922	1	8172	8172		44.117	4.864	1	1929800	+		33651	26012	22250	22260	38426	38426					0.060319920203255606
LQITHLIRK	9	Unmodified	_LQITHLIRK_					0	0	0		ENSG00000155714|ENST00000424898|PDZD9	ENSG00000155714|ENST00000424898|PDZD9	ENSG00000155714|ENST00000424898|PDZD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.363037109375	2	561.361308	1120.70806	0.30908	0.00017351	4.2223	0.0023703	4.5314	0.0025438	561.3635562364497	45.873	0.93881	45.889	45.484	46.422	0.015514					44	26	2	0	0	0	0.7932	1	3320	3320		20.947	0.95016	1	119450			33652	5336	22251	22261	38427	38427					0.15253679284933241
LQITLPVV	8	Unmodified	_LQITLPVV_					0	0	0			REV__nc|ENSG00000007202|Q14667-2|BLTP2	REV__nc|ENSG00000007202|Q14667-2|BLTP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879638671875	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.82464	1	2730	2730		21.702	0	1	14534000	+		33653	16118	22252	22262	38428	38428					0.11308733942325944
LQIWSIPR	8	Unmodified	_LQIWSIPR_					0	0	0		ENST00000500625.7_3_12:133758097-133764492:+|nuORF	ENST00000500625.7_3_12:133758097-133764492:+|nuORF	ENST00000500625.7_3_12:133758097-133764492:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8017272949219	2	506.800552	1011.58655	-0.86379	-0.00043777	0.93984	0.00047631	0.076052	3.8543E-05	506.8010240498416	43.849	2.352	43.815	42.486	44.838	-0.033474					86	55	2	0	0	0	0.87479	1	3534	3534		30.504	1.3541	1	326070			33654	12839	22253	22263	38429	38429					0.08122056922422871
LQKAADPWVL	10	Unmodified	_LQKAADPWVL_					0	0	0		nc|ENSG00000149639|O94964-4|MTCL2;nc|ENSG00000149639|O94964-1|MTCL2;ENSG00000149639|ENST00000237536|SOGA1	nc|ENSG00000149639|O94964-4|MTCL2	nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.8230590820312	2	570.824224	1139.63389	-1.1206	-0.00063967	1.4828	0.00084642	0.36219	0.00020675	570.8249841435919	61.716	0.70389	61.707	61.602	62.306	-0.0094147					70	28	3	0	0	0	0.80179	1	5740	5740		39.253	3.6345	1	536910			33655	5042	22254	22264	38430	38430					0.06966291402750358
LQKAIAKSDLK	11	Unmodified	_LQKAIAKSDLK_					0	0	0			REV__nc|ENSG00000163625|Q8IZQ1-2|WDFY3	REV__nc|ENSG00000163625|Q8IZQ1-2|WDFY3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.55267333984375	3	405.587084	1213.73942	0.65	0.00026363	0.50339	0.00020417	1.1534	0.0004678	405.5880605089343	28.739	0.25016	28.566	28.51	28.76	-0.17336					6	5	2	0	0	0	0.17061	1	1777	1777		37.6	12.532	1	29494	+		33656	20946	22255	22265	38431	38431					0.14110207528347019
LQKARIVDVNL	11	Unmodified	_LQKARIVDVNL_					0	0	0			REV__ENSG00000103528|ENST00000355377|SYT17	REV__ENSG00000103528|ENST00000355377|SYT17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.89306640625	2	634.887887	1267.76122	2.7957	0.0017749	4.3447	0.0027584	7.1403	0.0045333	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.62614	1	11795	11795		41.427	3.6151	1	42597000	+		33657	17417	22256	22266	38432	38432					0.13805012276952766
LQKASVLRRSK	11	Unmodified	_LQKASVLRRSK_					0	0	0			REV__ENST00000557380.5_1_14:50304918-50319471:-|nuORF	REV__ENST00000557380.5_1_14:50304918-50319471:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.405517578125	2	643.406778	1284.799	2.6785	0.0017233	-4.0081	-0.0025788	-1.3296	-0.00085549	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.69248	1	11714	11714		32.751	1.2207	1	14704000	+		33658	21192	22257	22267	38433	38433					0.16799523262397997
LQKASVLRRSK	11	Unmodified	_LQKASVLRRSK_					0	0	0			REV__ENST00000557380.5_1_14:50304918-50319471:-|nuORF	REV__ENST00000557380.5_1_14:50304918-50319471:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4057006835938	2	643.406778	1284.799	0.94326	0.0006069	-2.5215	-0.0016224	-1.5783	-0.0010155	643.4049918963857	105.64	1.1738	105.75	104.98	106.16	0.10766					144	29	6	0	0	0	0.7144	1	11286	11286		29.17	0.020503	1	23114000	+		33659	21192	22257	22267	38434	38434					0.16799523262397997
LQKASVLRRSK	11	Unmodified	_LQKASVLRRSK_					0	0	0			REV__ENST00000557380.5_1_14:50304918-50319471:-|nuORF	REV__ENST00000557380.5_1_14:50304918-50319471:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4057006835938	2	643.406778	1284.799	-1.1464	-0.0007376	-0.28555	-0.00018372	-1.4319	-0.00092132	643.406459620359	105.63	1.1927	105.7	104.97	106.16	0.073112					153	29	6	0	0	0	0.60058	1	11188	11188		44.377	3.599	1	22367000	+		33660	21192	22257	22267	38435	38435					0.16799523262397997
LQKDPDQRGGC	11	Unmodified	_LQKDPDQRGGC_					0	0	0			REV__ENSG00000276043|ENST00000650932|UHRF1	REV__ENSG00000276043|ENST00000650932|UHRF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.83740234375	2	608.790586	1215.56662	-0.19342	-0.00011775	-3.2758	-0.0019943	-3.4692	-0.002112	608.7883143230669	53.979	0.79451	54.564	54.291	55.085	0.58474					35	18	3	0	0	0	0.17385	1	5558	5558		25.574	2.0514	1	583150	+		33661	15714	22258	22268	38436	38436					-0.03254106870508622
LQKDPDQRGGC	11	Unmodified	_LQKDPDQRGGC_					0	0	0			REV__ENSG00000276043|ENST00000650932|UHRF1	REV__ENSG00000276043|ENST00000650932|UHRF1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	608.790586	1215.56662	0.96584	0.000588	-4.4504	-0.0027094	-3.4846	-0.0021214	608.7876159925054	54.165	0.62931	54.572	54.319	54.948	0.40663	0.0038486	-0.00082659	NaN	30.318	36	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	445350	+		33662	15714	22258	22268							-0.03254106870508622
LQKDSAEKRAR	11	Unmodified	_LQKDSAEKRAR_					0	0	0		ENSG00000203734|ENST00000541398|ECT2L	ENSG00000203734|ENST00000541398|ECT2L	ENSG00000203734|ENST00000541398|ECT2L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	3	434.580992	1300.72115	1.3827	0.00060087	0.72629	0.00031563	2.1089	0.00091651	434.5814720828617	33.834	0.37028	34.139	33.912	34.282	0.30494					12	8	2	0	0	0	0.17524	1	2474	2474		41.109	19.329	1	80388			33663	8392	22259	22269	38437	38437					0.08281465606341953
LQKFDIGSHK	10	Unmodified	_LQKFDIGSHK_					0	0	0			REV__ENST00000534706.1_1_11:6630285-6630453:+|nuORF	REV__ENST00000534706.1_1_11:6630285-6630453:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	586.8242797851562	2	586.824755	1171.63496	0.78756	0.00046216	-1.9997	-0.0011735	-1.2121	-0.00071131	586.8234697400546	110.07	1.5893	110.19	110.01	111.6	0.12024					137	58	3	0	0	0	0.8651	1	11861	11861		25.574	1.3713	1	6218400	+		33664	21280	22260	22270	38438	38438					0.05600505771644748
LQKGAGFH	8	Unmodified	_LQKGAGFH_					0	0	0		nc|ENSG00000113073|Q96Q91-4|SLC4A9;nc|ENSG00000113073|Q96Q91-2|SLC4A9;ENSG00000113073|ENST00000506757|SLC4A9;nc|ENSG00000113073|Q96Q91|SLC4A9	nc|ENSG00000113073|Q96Q91-4|SLC4A9	nc|ENSG00000113073|Q96Q91-4|SLC4A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	429.2357482910156	2	429.235045	856.455536	-0.17888	-7.6781E-05	1.7289	0.00074211	1.55	0.00066533	429.2356452046458	63.375	2.3242	63.37	62.729	65.053	-0.0055504					274	88	5	0	0	0	0.86791	1	5917	5917		28.254	2.8041	1	5346500			33665	2696	22261	22271	38439	38439					0.02156666274379404
LQKGAGFH	8	Unmodified	_LQKGAGFH_					0	0	0		nc|ENSG00000113073|Q96Q91-4|SLC4A9;nc|ENSG00000113073|Q96Q91-2|SLC4A9;ENSG00000113073|ENST00000506757|SLC4A9;nc|ENSG00000113073|Q96Q91|SLC4A9	nc|ENSG00000113073|Q96Q91-4|SLC4A9	nc|ENSG00000113073|Q96Q91-4|SLC4A9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.2357177734375	2	429.235045	856.455536	0.39502	0.00016955	1.1956	0.00051318	1.5906	0.00068273	429.2354268655387	63.129	2.3304	63.252	62.677	65.007	0.12252					259	94	5	0	0	0	0.88915	1	5552	5552		35.201	8.4046	1	5976700			33666	2696	22261	22271	38440	38440					0.02156666274379404
LQKIAEDRNK	10	Unmodified	_LQKIAEDRNK_					0	0	0			REV__ENSG00000100345|ENST00000216181|MYH9	REV__ENSG00000100345|ENST00000216181|MYH9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5527648925781	3	405.566571	1213.67788	0.32558	0.00013204	2.9271	0.0011871	3.2526	0.0013192	405.56842161547087	28.782	0.38553	28.752	28.481	28.866	-0.029207					16	8	3	0	0	0	0.37624	1	1753	1753		34.087	7.3936	1	57625	+		33667	17175	22262	22272	38441	38441					0.0795927582908007
LQKILARIVHK	11	Unmodified	_LQKILARIVHK_					0	0	0			REV__nc|ENSG00000270379|A2RTY3-5|HEATR9	REV__nc|ENSG00000270379|A2RTY3-5|HEATR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2918395996094	3	440.294235	1317.86087	-0.12551	-5.5261E-05	-4.0795	-0.0017962	-4.205	-0.0018514	440.29228151572136	58.121	1.3606	58.091	57.557	58.917	-0.029865					98	39	4	0	0	0	0.79476	1	5419	5419		12.433	0	1	263280	+		33668	23978	22263	22273	38442	38442					0.21465874681530295
LQKLFLLMFA	10	Unmodified	_LQKLFLLMFA_					0	0	0			REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000172915|Q8NFP9|NBEA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.93377685546875	3	408.578872	1222.71479	0.012695	5.1868E-06	-1.4469	-0.00059117	-1.4342	-0.00058599	408.5780381651018	16.271	0.22983	16.331	16.232	16.462	0.059267					19	10	2	0	0	0	0.37624	1	129	129		35.152	5.982	1	158450	+		33669	21863	22264	22274	38443	38443					0.11233856121293684
LQKLIKVKDAP	11	Unmodified	_LQKLIKVKDAP_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3836669921875	2	626.903005	1251.79146	-1.202	-0.00075353	-3.9318	-0.0024649	-5.1338	-0.0032184	626.9003830432383	112.28	0.21877	112.26	112.16	112.38	-0.026627					11	7	2	0	0	0	0.17472	1	11958	11958		18.262	3.3972	1	986070	+		33670	20278	22265	22275	38444	38444					0.17563370942139045
LQKLKEKHK	9	Unmodified	_LQKLKEKHK_					0	0	0			REV__ENST00000527833.5_1_15:101814760-101817622:-|nuORF	REV__ENST00000527833.5_1_15:101814760-101817622:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.367919921875	2	576.36659	1150.71863	0.52808	0.00030437	3.353	0.0019326	3.8811	0.0022369	576.368351063032	43.383	1.3544	43.388	42.868	44.222	0.0057526					70	33	3	0	0	0	0.7932	1	2947	2947		19.997	1.7347	1	281870	+		33671	18974	22266	22276	38445	38445					0.14929661939368088
LQKLLERVPI	10	Unmodified	_LQKLLERVPI_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57476806640625	3	403.595691	1207.76524	-0.15728	-6.3478E-05	4.2011	0.0016955	4.0438	0.0016321	403.9332870374824	80.756	0.32645	81.283	81.12	81.446	0.52676					10	7	2	0	0	0	0.37624	1	9310	9310		23.378	0	1	96436			33672	4683	22267	22277	38446	38446					0.1696710177066052
LQKLQARVD	9	Unmodified	_LQKLQARVD_					0	0	0		ENSG00000164828|ENST00000401592|SUN1;nc|ENSG00000164828|O94901-9|SUN1;nc|ENSG00000164828|O94901-6|SUN1;ENST00000413171.6_1_7:892397-912965:+|nuORF;nc|ENSG00000164828|O94901-5|SUN1;ENST00000475971.5_1_7:893033-912965:+|nuORF	ENSG00000164828|ENST00000401592|SUN1	ENSG00000164828|ENST00000401592|SUN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	535.814208984375	2	535.819473	1069.62439	-1.4984	-0.00080286	-2.3777	-0.001274	-3.876	-0.0020769	535.8186242164743	99.127	1.4411	99.313	98.898	100.34	0.18582					51	33	2	0	0	0	0.7932	1	10246	10246		20.947	1.587	1	393170			33673	6008	22268	22278	38447	38447					0.09236523117237994
LQKLYISKN	9	Unmodified	_LQKLYISKN_					0	0	0		ENST00000492658.1_1_X:152771329-152774230:+|nuORF;ENSG00000182492|ENST00000331595|BGN	ENST00000492658.1_1_X:152771329-152774230:+|nuORF	ENST00000492658.1_1_X:152771329-152774230:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8298950195312	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.78536	1	9002	9002		29.15	0	1	6029400			33674	7459	22269	22279	38448	38448					0.10094577919812764
LQKNVVAYIS	10	Unmodified	_LQKNVVAYIS_					0	0	0		ENST00000414826.1_1_3:175177932-175205321:+|nuORF;ENST00000473253.5_1_3:174581768-175298945:+|nuORF;ENSG00000177694|ENST00000454872|NAALADL2	ENST00000414826.1_1_3:175177932-175205321:+|nuORF	ENST00000414826.1_1_3:175177932-175205321:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.8322143554688	2	567.829506	1133.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.402	1	15.319	14.819	15.819	-0.083363								0	0	0	0.45132	1	36	36		27.882	3.6795	1				33675	7157	22270	22280	38449	38449					0.08298274057187882
LQKPAVRKHS	10	Unmodified	_LQKPAVRKHS_					0	0	0		ENSG00000178852|ENST00000331493|EFCAB13;nc|ENSG00000178852|Q8IY85-2|EFCAB13;ENST00000520776.5_1_17:45405719-45473360:+|nuORF	ENSG00000178852|ENST00000331493|EFCAB13	ENSG00000178852|ENST00000331493|EFCAB13	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3538208007812	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.42	1	114.48	113.98	114.98	0.061073								0	0	0	0.45132	1	12231	12231		17.468	1.8262	1				33676	7228	22271	22281	38450	38450					0.1186360713677459
LQKPAVRKHS	10	Unmodified	_LQKPAVRKHS_					0	0	0		ENSG00000178852|ENST00000331493|EFCAB13;nc|ENSG00000178852|Q8IY85-2|EFCAB13;ENST00000520776.5_1_17:45405719-45473360:+|nuORF	ENSG00000178852|ENST00000331493|EFCAB13	ENSG00000178852|ENST00000331493|EFCAB13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3538208007812	2	582.354014	1162.69348	-1.3468	-0.00078429	0.41376	0.00024096	-0.93299	-0.00054333	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.86348	1	11196	11196		31.53	4.8369	1	120000000			33677	7228	22271	22281	38451	38451					0.1186360713677459
LQKPGVLAPLD	11	Unmodified	_LQKPGVLAPLD_					0	0	0			REV__ENSG00000084092|ENST00000264230|NOA1	REV__ENSG00000084092|ENST00000264230|NOA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8431396484375	2	575.845156	1149.67576	-1.6501	-0.00095021	-2.5974	-0.0014957	-4.2475	-0.0024459	575.8434791868526	90.193	1.8473	90.663	90.18	92.028	0.47068					146	46	4	0	0	0	0.48529	1	10764	10764		52.937	5.0211	1	1810000	+		33678	16867	22272	22282	38452	38452					0.10690847091268552
LQKPKSSLKSS	11	Unmodified	_LQKPKSSLKSS_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.8583374023438	2	601.858795	1201.70304	1.0107	0.00060827	-2.806	-0.0016888	-1.7953	-0.0010805	601.8569689467788	103.23	2.1882	103.41	103.08	105.27	0.18297					123	54	4	0	0	0	0.732	1	10928	10928		26.063	3.0209	1	2928900			33679	8353	22273	22283	38453	38453					0.11025330631650831
LQKPKSSLKSS	11	Unmodified	_LQKPKSSLKSS_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	601.858154296875	2	601.858795	1201.70304	0.90226	0.00054303	-2.5932	-0.0015607	-1.6909	-0.0010177	601.8571228928912	103.35	2.581	103.48	103.09	105.68	0.12622					132	64	4	0	0	0	0.7144	1	11018	11018		29.17	1.2878	1	2471100			33680	8353	22273	22283	38454	38454					0.11025330631650831
LQKPKTPTKL	10	Unmodified	_LQKPKTPTKL_					0	0	0			REV__nc|ENSG00000039560|Q9P0K7-4|RAI14	REV__nc|ENSG00000039560|Q9P0K7-4|RAI14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3662109375	2	577.368798	1152.72304	-1.363	-0.00078696	-2.7149	-0.0015675	-4.0779	-0.0023544	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.64457	1	10693	10693		47.657	8.4045	1	14386000	+		33681	29683	22274	22284	38455	38455					0.15279126362247553
LQKPKYKITF	10	Unmodified	_LQKPKYKITF_					0	0	0			REV__nc|ENSG00000135317|Q9Y5W7-2|SNX14	REV__nc|ENSG00000135317|Q9Y5W7-2|SNX14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.8853759765625	2	633.384448	1264.75434	-0.18394	-0.0001165	1.474	0.00093359	1.29	0.00081709	633.3853758780649	57.013	1.0689	57.046	56.666	57.735	0.033184					61	35	2	0	0	0	0.86549	1	5224	5224		31.53	1.2121	1	142320	+		33682	29863	22275	22285	38456	38456					0.13255699396358978
LQKPQDKLEVR	11	Unmodified	_LQKPQDKLEVR_					0	0	0		nc|ENSG00000163803|Q6P1J6-3|PLB1;ENSG00000163803|ENST00000327757|PLB1;nc|ENSG00000163803|Q6P1J6-2|PLB1;nc|ENSG00000163803|Q6P1J6-4|PLB1	nc|ENSG00000163803|Q6P1J6-3|PLB1	nc|ENSG00000163803|Q6P1J6-3|PLB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.932861328125	3	451.933143	1352.7776	-0.13839	-6.2545E-05	-0.82875	-0.00037454	-0.96715	-0.00043708	451.93267141602934	99.223	2.3092	99.273	97.79	100.1	0.049828					147	53	3	0	0	0	0.77511	1	10471	10471		16.53	0	1	486010			33683	5867	22276	22286	38457	38457					0.1153209344302013
LQKPYVHK	8	Unmodified	_LQKPYVHK_					0	0	0		ENST00000531849.5_1_11:74554845-74617298:-|nuORF;nc|ENSG00000166435|Q6P2D8-5|XRRA1;nc|ENSG00000166435|Q6P2D8-2|XRRA1;nc|ENSG00000166435|Q6P2D8-4|XRRA1;nc|ENSG00000166435|Q6P2D8-3|XRRA1;nc|ENSG00000166435|Q6P2D8|XRRA1;ENSG00000166435|ENST00000684022|XRRA1;ENST00000431210.2_1_11:74555176-74574187:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8000793457031	2	506.800552	1011.58655	-1.5362	-0.00077856	2.1529	0.0010911	0.61671	0.00031255	506.8015777288388	44.442	2.8102	44.442	42.605	45.415	0					120	68	3	0	0	0	0.8347	1	3244	3244		23.042	2.0956	1	386210			33684	6195	22277	22287	38458	38458					0.08122056922411502
LQKPYVHK	8	Unmodified	_LQKPYVHK_					0	0	0		ENST00000531849.5_1_11:74554845-74617298:-|nuORF;nc|ENSG00000166435|Q6P2D8-5|XRRA1;nc|ENSG00000166435|Q6P2D8-2|XRRA1;nc|ENSG00000166435|Q6P2D8-4|XRRA1;nc|ENSG00000166435|Q6P2D8-3|XRRA1;nc|ENSG00000166435|Q6P2D8|XRRA1;ENSG00000166435|ENST00000684022|XRRA1;ENST00000431210.2_1_11:74555176-74574187:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8003845214844	2	506.800552	1011.58655	-0.65008	-0.00032946	1.6125	0.00081723	0.96246	0.00048778	506.8012923744614	46.783	1.6998	46.754	45.886	47.586	-0.028782					74	44	2	0	0	0	0.80706	1	3785	3785		19.36	0	1	223510			33685	6195	22277	22287	38459	38459					0.08122056922411502
LQKPYVHK	8	Unmodified	_LQKPYVHK_					0	0	0		ENST00000531849.5_1_11:74554845-74617298:-|nuORF;nc|ENSG00000166435|Q6P2D8-5|XRRA1;nc|ENSG00000166435|Q6P2D8-2|XRRA1;nc|ENSG00000166435|Q6P2D8-4|XRRA1;nc|ENSG00000166435|Q6P2D8-3|XRRA1;nc|ENSG00000166435|Q6P2D8|XRRA1;ENSG00000166435|ENST00000684022|XRRA1;ENST00000431210.2_1_11:74555176-74574187:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.7999572753906	2	506.800552	1011.58655	-0.74642	-0.00037829	1.5683	0.00079484	0.82192	0.00041655	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.87064	1	3780	3780		29.15	2.3535	1	258120			33686	6195	22277	22287	38460	38460					0.08122056922411502
LQKPYVHK	8	Unmodified	_LQKPYVHK_					0	0	0		ENST00000531849.5_1_11:74554845-74617298:-|nuORF;nc|ENSG00000166435|Q6P2D8-5|XRRA1;nc|ENSG00000166435|Q6P2D8-2|XRRA1;nc|ENSG00000166435|Q6P2D8-4|XRRA1;nc|ENSG00000166435|Q6P2D8-3|XRRA1;nc|ENSG00000166435|Q6P2D8|XRRA1;ENSG00000166435|ENST00000684022|XRRA1;ENST00000431210.2_1_11:74555176-74574187:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8000793457031	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.788	1	43.796	43.296	44.296	0.0084534								0	0	0	0.29755	1	3043	3043		24.203	0	1				33687	6195	22277	22287	38461	38461					0.08122056922411502
LQKPYVHK	8	Unmodified	_LQKPYVHK_					0	0	0		ENST00000531849.5_1_11:74554845-74617298:-|nuORF;nc|ENSG00000166435|Q6P2D8-5|XRRA1;nc|ENSG00000166435|Q6P2D8-2|XRRA1;nc|ENSG00000166435|Q6P2D8-4|XRRA1;nc|ENSG00000166435|Q6P2D8-3|XRRA1;nc|ENSG00000166435|Q6P2D8|XRRA1;ENSG00000166435|ENST00000684022|XRRA1;ENST00000431210.2_1_11:74555176-74574187:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	ENST00000531849.5_1_11:74554845-74617298:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8003845214844	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.87922	1	3120	3120		31.955	0	1	412810			33688	6195	22277	22287	38462	38462					0.08122056922411502
LQKQEEEEM	9	Oxidation (M)	_LQKQEEEEM(Oxidation (M))_		LQKQEEEEM(1)		LQKQEEEEM(79)	0	0	1			REV__ENSG00000149548|ENST00000344762|CCDC15	REV__ENSG00000149548|ENST00000344762|CCDC15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.2633056640625	2	590.263536	1178.51252	-0.77729	-0.00045881	1.6405	0.00096834	0.86324	0.00050954	590.2644066701059	82.337	1.1366	82.764	82.313	83.45	0.42645					72	27	4	0	0	0	0.17307	2	9506	9506;9542		79.451	11.177	1	3187300	+		33689	20178	22278	22288	38463;38464	38463		301			-0.06959743812740271
LQKQVCAHIVQ	11	Unmodified	_LQKQVCAHIVQ_					0	0	0		nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.3068542480469	3	422.904419	1265.69143	1.0393	0.00043953	3.6603	0.001548	4.6996	0.0019875	423.2394142681504	20.351	0.27427	19.892	19.687	19.961	-0.4591					7	5	2	0	0	0	0.1728	1	633	633		8.0344	0	1	11868			33690	687	22279	22289	38465	38465					0.06920810336669092
LQKRFILNLP	10	Unmodified	_LQKRFILNLP_					0	0	0		ENSG00000126067|ENST00000373237|PSMB2	ENSG00000126067|ENST00000373237|PSMB2	ENSG00000126067|ENST00000373237|PSMB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3934936523438	2	621.390065	1240.76558	1.3	0.00080781	2.97	0.0018456	4.2701	0.0026534	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.85694	1	11362	11362		21.96	2.8564	1	23079000			33691	3439	22280	22290	38466	38466					0.1548252149052587
LQKRFILNLP	10	Unmodified	_LQKRFILNLP_					0	0	0		ENSG00000126067|ENST00000373237|PSMB2	ENSG00000126067|ENST00000373237|PSMB2	ENSG00000126067|ENST00000373237|PSMB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3930053710938	2	621.390065	1240.76558	0.92125	0.00057246	4.2739	0.0026558	5.1952	0.0032282	621.3925512557826	106.19	2.0795	106.29	105.91	107.99	0.099007					149	50	5	0	0	0	0.86589	1	11399	11399		29.15	4.9468	1	2148500			33692	3439	22280	22290	38467	38467					0.1548252149052587
LQKRSRRKHIL	11	Unmodified	_LQKRSRRKHIL_					0	0	0		ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9756774902344	3	478.975788	1433.90553	-0.79395	-0.00038028	-1.9266	-0.0009228	-2.7206	-0.0013031	478.9747699681175	46.852	2.0236	46.823	45.583	47.607	-0.028782					130	52	3	0	0	0	0.77511	2	3867	3832;3867		16.53	5.5317	1	237090			33693	13809	22281	22291	38468;38469	38469					0.2059369854760007
LQKRSRRKHIL	11	Unmodified	_LQKRSRRKHIL_					0	0	0		ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97576904296875	3	478.975788	1433.90553	-0.69273	-0.0003318	-2.0219	-0.00096845	-2.7146	-0.0013002	478.9746813820608	49.583	2.3312	49.559	48.401	50.732	-0.024033					111	53	3	0	0	0	0.79476	1	4280	4280		12.433	0	1	142150			33694	13809	22281	22291	38470	38470					0.2059369854760007
LQKRSRRKHIL	11	Unmodified	_LQKRSRRKHIL_					0	0	0		ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.974853515625	3	478.975788	1433.90553	-0.90815	-0.00043498	-1.7541	-0.00084019	-2.6623	-0.0012752	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.81021	1	3475	3475		9.2118	0.41249	1	368580			33695	13809	22281	22291	38471	38471					0.2059369854760007
LQKRSRRKHIL	11	Unmodified	_LQKRSRRKHIL_					0	0	0		ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97369384765625	3	478.975788	1433.90553	-0.90026	-0.0004312	-1.5139	-0.0007251	-2.4141	-0.0011563	479.3094231457841	50.589	1.3321	50.619	49.948	51.28	0.029629					91	40	3	0	0	0	0.79476	1	3937	3937		12.433	2.3289	1	250790			33696	13809	22281	22291	38472	38472					0.2059369854760007
LQKRSRRKHIL	11	Unmodified	_LQKRSRRKHIL_					0	0	0		ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9746398925781	3	478.975788	1433.90553	0.36809	0.00017631	-2.7907	-0.0013367	-2.4226	-0.0011604	478.9743048162478	54.877	1.9768	54.968	54.012	55.989	0.091167					129	57	3	0	0	0	0.79224	1	4575	4575		12.957	2.3707	1	277080			33697	13809	22281	22291	38473	38473					0.2059369854760007
LQKRSRRKHIL	11	Unmodified	_LQKRSRRKHIL_					0	0	0		ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3087463378906	3	478.975788	1433.90553	-0.315	-0.00015088	-2.2657	-0.0010852	-2.5807	-0.0012361	478.9746652956354	49.514	1.8124	49.42	48.44	50.252	-0.093178					109	43	3	0	0	0	0.79224	1	3785	3785		12.957	3.7457	1	294110			33698	13809	22281	22291	38474	38474					0.2059369854760007
LQKRSRRKHIL	11	Unmodified	_LQKRSRRKHIL_					0	0	0		ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3048095703125	3	478.975788	1433.90553	-0.41434	-0.00019846	-1.9974	-0.00095669	-2.4117	-0.0011551	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.84494	1	4404	4404		6.3209	0	1	341610			33699	13809	22281	22291	38475	38475					0.2059369854760007
LQKRSRRKHIL	11	Unmodified	_LQKRSRRKHIL_					0	0	0		ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.974365234375	3	478.975788	1433.90553	-0.6074	-0.00029093	-3.2624	-0.0015626	-3.8698	-0.0018535	478.97420725254665	42.857	1.6177	43.291	42.605	44.223	0.4334					121	39	4	0	0	0	0.76892	1	3857	3857		17.833	4.8757	1	1394900			33700	13809	22281	22291	38476	38476					0.2059369854760007
LQKSSGGDEL	10	Unmodified	_LQKSSGGDEL_					0	0	0			REV__ENSG00000183340|ENST00000332349|JRKL	REV__ENSG00000183340|ENST00000332349|JRKL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2627563476562	2	517.261653	1032.50875	0.54038	0.00027952	3.2643	0.0016885	3.8046	0.001968	517.2631955415875	57.066	0.84631	57.621	57.27	58.116	0.55512					43	20	3	0	0	0	0.8545	1	5923	5923		36.447	1.246	1	1185900	+		33701	22599	22282	22292	38477	38477					-0.00620045524260604
LQKVFKAEAS	10	Unmodified	_LQKVFKAEAS_					0	0	0			REV__ENST00000609477.5_1_6:125555503-125614049:-|nuORF	REV__ENST00000609477.5_1_6:125555503-125614049:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.8203125	2	560.821681	1119.62881	0.38825	0.00021774	-3.7813	-0.0021206	-3.393	-0.0019029	560.8194818178797	92.394	2.729	92.618	91.343	94.072	0.22352					209	64	4	0	0	0	0.86218	1	9265	9265		32.812	1.2826	1	816880	+		33702	17905	22283	22293	38478	38478					0.07377987540144204
LQKVLKKR	8	Unmodified	_LQKVLKKR_					0	0	0		ENSG00000171180|ENST00000641868|OR2M4	ENSG00000171180|ENST00000641868|OR2M4	ENSG00000171180|ENST00000641868|OR2M4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3072204589844	2	506.853119	1011.69168	-1.5927	-0.00080725	0.76269	0.00038657	-0.82998	-0.00042068	506.85363124360316	108.97	0.41168	108.99	108.83	109.24	0.020569					31	20	2	0	0	0	0.4196	1	11656	11656		12.207	0	1	904860			33703	6642	22284	22294	38479	38479					0.18630598118841135
LQLAPALLL	9	Unmodified	_LQLAPALLL_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.3148498535156	2	476.315503	950.616454	0.27208	0.00012959	0.58709	0.00027964	0.85917	0.00040924	476.31570952203646	43.422	0.96937	43.396	42.677	43.647	-0.026764					33	22	2	0	0	0	0.78058	1	3309	3309		30.504	0	1	79278	+		33704	21984	22285	22295	38480	38480					0.13916995867759852
LQLAPALLL	9	Unmodified	_LQLAPALLL_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	476.315503	950.616454	-1.7162	-0.00081747	2.9492	0.0014048	1.233	0.00058729	476.3165744568674	43.113	0.97498	43.113	42.605	43.58	0	-0.17217	0.0014394	NaN	30.504	36	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101520	+		33705	21984	22285	22295							0.13916995867759852
LQLAPALLL	9	Unmodified	_LQLAPALLL_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	476.315503	950.616454	0.27208	0.00012959	0.58709	0.00027964	0.85917	0.00040924	476.31570952203646	43.422	0.96937	43.396	42.677	43.647	-0.026764	0.11001	-0.00081081	NaN	30.504	33	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79278	+		33706	21984	22285	22295							0.13916995867759852
LQLAPALLL	9	Unmodified	_LQLAPALLL_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	476.315503	950.616454	-1.8021	-0.00085838	2.1952	0.0010456	0.39302	0.0001872	476.31613236004114	43.632	0.96143	43.63	42.934	43.896	-0.002449	0.34443	0.00072107	NaN	30.504	28	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49775	+		33707	21984	22285	22295							0.13916995867759852
LQLAPALLL	9	Unmodified	_LQLAPALLL_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	476.315503	950.616454	-0.95435	-0.00045457	1.9975	0.00095145	1.0432	0.00049688	476.31633989188515	43.295	0.93182	43.301	42.868	43.8	0.0057526	0.015226	0.0005328	NaN	30.504	27	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70705	+		33708	21984	22285	22295							0.13916995867759852
LQLAPALLL	9	Unmodified	_LQLAPALLL_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	476.315503	950.616454	0.26049	0.00012407	1.2092	0.00057595	1.4697	0.00070002	476.31581076832725	43.149	0.93245	43.206	42.87	43.802	0.056744	-0.079857	-0.0002182	NaN	30.504	29	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103480	+		33709	21984	22285	22295							0.13916995867759852
LQLAPALLL	9	Unmodified	_LQLAPALLL_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	476.315503	950.616454	-0.10079	-4.8008E-05	1.5159	0.00072205	1.4151	0.00067405	476.3157989503159	43.118	0.82323	43.068	42.785	43.608	-0.050308	-0.21764	7.401E-05	NaN	30.504	30	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72139	+		33710	21984	22285	22295							0.13916995867759852
LQLASQSLL	9	Unmodified	_LQLASQSLL_					0	0	0			REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.7905578613281	2	486.78985	971.565146	0.96426	0.00046939	-1.1101	-0.00054036	-0.14579	-7.0969E-05	486.7891263906007	33.666	0.91739	33.971	33.448	34.366	0.30494					43	21	3	0	0	0	0.36616	1	2465	2465		60.118	0	1	656080	+		33711	21608	22286	22296	38481	38481					0.07822627103041668
LQLEAAKRGIL	11	Unmodified	_LQLEAAKRGIL_					0	0	0		nc|ENSG00000139746|Q5T8P6-5|RBM26;nc|ENSG00000139746|Q5T8P6-4|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26;nc|ENSG00000139746|Q5T8P6-2|RBM26;ENSG00000139746|ENST00000438737|RBM26	nc|ENSG00000139746|Q5T8P6-5|RBM26	nc|ENSG00000139746|Q5T8P6-5|RBM26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.9221496582031	3	404.587195	1210.73976	1.2344	0.00049943	2.6563	0.0010747	3.8907	0.0015741	404.5881712722995	41.372	1.4334	41.378	40.604	42.037	0.0065727					70	37	2	0	0	0	0.74022	1	2966	2966		24.232	4.2013	1	244970			33712	4396	22287	22297	38482	38482					0.14281627248237783
LQLEPEAAGP	10	Unmodified	_LQLEPEAAGP_					0	0	0		ENST00000564968.1_1_16:1507514-1509320:-|nuORF	ENST00000564968.1_1_16:1507514-1509320:-|nuORF	ENST00000564968.1_1_16:1507514-1509320:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.76318359375	2	512.769114	1023.52368	0.92826	0.00047598	-0.98997	-0.00050762	-0.061706	-3.1641E-05	512.7684512724358	22.716	0.75475	22.297	21.97	22.725	-0.41879					42	17	4	0	0	0	0.74274	1	919	919		42.396	4.5846	1	536540			33713	13900	22288	22298	38483	38483					0.012854463437065533
LQLIRHITK	9	Unmodified	_LQLIRHITK_					0	0	0		ENST00000528585.5_1_11:7686741-7690520:-|nuORF;ENST00000534443.5_1_11:7688946-7694113:-|nuORF;nc|ENSG00000166394|Q6BCY4-2|CYB5R2;ENSG00000166394|ENST00000299498|CYB5R2	ENST00000528585.5_1_11:7686741-7690520:-|nuORF	ENST00000528585.5_1_11:7686741-7690520:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3619384765625	2	561.361308	1120.70806	-1.1522	-0.00064679	4.3288	0.00243	3.1766	0.0017832	561.3636203796618	43.91	1.2503	44.684	44.223	45.473	0.7738					84	30	4	0	0	0	0.7932	1	3981	3981		25.574	2.0514	1	1618600			33714	6189	22289	22299	38484	38484					0.15253679284910504
LQLKPLRLPTP	11	Unmodified	_LQLKPLRLPTP_					0	0	0		ENSG00000168334|ENST00000340369|XIRP1;nc|ENSG00000168334|Q702N8-2|XIRP1	ENSG00000168334|ENST00000340369|XIRP1	ENSG00000168334|ENST00000340369|XIRP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.294921875	3	425.943091	1274.80744	-1.4213	-0.00060541	2.9046	0.0012372	1.4833	0.0006318	426.278726331712	75.399	1.6795	75.487	74.829	76.509	0.087631					63	47	2	0	0	0	0.1745	1	6986	6986		23.378	0.81632	1	43618			33715	6394	22290	22300	38485	38485					0.18103077179011962
LQLLAVELEGT	11	Unmodified	_LQLLAVELEGT_					0	0	0		ENST00000511998.1_1_3:129034238-129036147:+|nuORF	ENST00000511998.1_1_3:129034238-129036147:+|nuORF	ENST00000511998.1_1_3:129034238-129036147:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	593.3436889648438	2	593.339904	1184.66525	3.3538	0.0019899	4.0959	0.0024302	7.4496	0.0044202	593.3422294286001	103.53	2.4934	103.48	103.12	105.61	-0.043755					162	59	4	0	0	0	0.72106	1	11417	11417		28.081	1.0342	1	2080000			33716	13029	22291	22301	38486	38486					0.08030819646160126
LQLLIQIASLV	11	Unmodified	_LQLLIQIASLV_					0	0	0			REV__ENSG00000101353|ENST00000343811|MROH8	REV__ENSG00000101353|ENST00000343811|MROH8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.929443359375	3	404.26383	1209.76966	-0.48707	-0.0001969	0.79255	0.0003204	0.30548	0.00012349	404.2641115201108	47.208	3.2538	47.121	46.429	49.683	-0.087646					154	88	3	0	0	0	0.17497	1	3540	3540		19.627	0	1	1191500	+		33717	17272	22292	22302	38487	38487					0.17316566193539984
LQLLPGFQP	9	Unmodified	_LQLLPGFQP_					0	0	0		ENST00000303545.3_1_8:125487403-125498198:+|nuORF	ENST00000303545.3_1_8:125487403-125498198:+|nuORF	ENST00000303545.3_1_8:125487403-125498198:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.27581787109375	2	506.794935	1011.57532	0.97399	0.00049361	-0.22971	-0.00011641	0.74429	0.0003772	506.7929378509693	19.264	0.66367	18.634	18.319	18.983	-0.6296					16	14	2	0	0	0	0.20789	1	531	531		15.642	4.7763	1	47359			33718	9835	22293	22303	38488	38488					0.06999234828288081
LQLLPGFQP	9	Unmodified	_LQLLPGFQP_					0	0	0		ENST00000303545.3_1_8:125487403-125498198:+|nuORF	ENST00000303545.3_1_8:125487403-125498198:+|nuORF	ENST00000303545.3_1_8:125487403-125498198:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	506.794935	1011.57532	0.087936	4.4565E-05	3.0436	0.0015425	3.1316	0.0015871	506.797144771413	18.828	0.062082	18.894	18.84	18.902	0.066298	0.2107	0.0039472	NaN	15.642	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46384			33719	9835	22293	22303							0.06999234828288081
LQLLPGFQP	9	Unmodified	_LQLLPGFQP_					0	0	0		ENST00000303545.3_1_8:125487403-125498198:+|nuORF	ENST00000303545.3_1_8:125487403-125498198:+|nuORF	ENST00000303545.3_1_8:125487403-125498198:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	506.794935	1011.57532	0.55351	0.00028051	-3.4572	-0.0017521	-2.9037	-0.0014716	506.79329097413273	18.999	0.47353	18.522	18.264	18.738	-0.47694	-0.16154	-0.002642	NaN	15.642	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29407			33720	9835	22293	22303							0.06999234828288081
LQLLPMVDP	9	Unmodified	_LQLLPMVDP_					0	0	0			REV__ENST00000366997.8_1_1:211922280-211922472:-|nuORF	REV__ENST00000366997.8_1_1:211922280-211922472:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.2894287109375	2	513.288628	1024.5627	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.828	1	70.904	70.404	71.404	0.076225								0	0	0	0.29134	1	6412	6412		34.173	3.6689	1		+		33721	25543	22294	22304	38489	38489					0.05140455373725672
LQLLSIMTL	9	Unmodified	_LQLLSIMTL_					0	0	0			REV__ENST00000512584.5_1_4:156828849-156830093:+|nuORF	REV__ENST00000512584.5_1_4:156828849-156830093:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3142700195312	2	516.312103	1030.60965	3.1012	0.0016012	0.56309	0.00029073	3.6643	0.0018919	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.7932	1	13212	13212		21.96	0	1	1162600	+		33722	27980	22295	22305	38490	38490					0.09557314924882121
LQLLVLYFTR	10	Unmodified	_LQLLVLYFTR_					0	0	0			REV__ENST00000523091.5_1_8:23112705-23118098:+|nuORF	REV__ENST00000523091.5_1_8:23112705-23118098:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.593017578125	3	422.592058	1264.75434	-1.8117	-0.0007656	4.0069	0.0016933	2.1952	0.00092767	422.59357864263933	54.504	2.542	54.559	53.757	56.299	0.055611					235	90	4	0	0	0	0.85086	1	4554	4554		19.263	0.73163	1	1177200	+		33723	20071	22296	22306	38491	38491					0.13255699396358978
LQLMAHNKVM	10	Oxidation (M)	_LQLM(Oxidation (M))AHNKVM_		LQLM(1)AHNKVM		LQLM(38)AHNKVM(-38)	0	0	1		nc|ENSG00000133958|Q9P2D8-2|UNC79;chr14:93540831-93542466|19|12.21|0.74|4.05|+|ENST00000621021|UNC79,UNC79;chr14:93532578-93537989|19|12.0|0.65|4.2|+|ENST00000621021|UNC79,UNC79;chr14:93529326-93532550|21|10.48|0.57|4.21|+|ENST00000621021|UNC79,UNC79;chr14:93524042-93528558|19|11.84|0.52|4.51|+|ENST00000621021|UNC79,UNC79;chr14:93477728-93487663|23|11.22|0.59|4.24|+|ENST00000621021|UNC79,UNC79;chr14:93474393-93477558|17|15.47|0.73|4.4|+|ENST00000555664|UNC79,UNC79;nc|ENSG00000133958|Q9P2D8|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;ENSG00000133958|ENST00000695012|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	600.8155517578125	2	600.815018	1199.61548	0.37797	0.00022709	-0.55107	-0.00033109	-0.1731	-0.000104	600.814362560299	42.774	0.55065	42.839	42.606	43.157	0.065033					24	14	2	0	0	0	0.43769	1	2901	2901		60.972	11.53	2	182870			33724	180	22297	22307	38492	38492		3			0.0236609016485545
LQLMAHNKVM	10	Oxidation (M)	_LQLM(Oxidation (M))AHNKVM_					0	0	1		nc|ENSG00000133958|Q9P2D8-2|UNC79;chr14:93540831-93542466|19|12.21|0.74|4.05|+|ENST00000621021|UNC79,UNC79;chr14:93532578-93537989|19|12.0|0.65|4.2|+|ENST00000621021|UNC79,UNC79;chr14:93529326-93532550|21|10.48|0.57|4.21|+|ENST00000621021|UNC79,UNC79;chr14:93524042-93528558|19|11.84|0.52|4.51|+|ENST00000621021|UNC79,UNC79;chr14:93477728-93487663|23|11.22|0.59|4.24|+|ENST00000621021|UNC79,UNC79;chr14:93474393-93477558|17|15.47|0.73|4.4|+|ENST00000555664|UNC79,UNC79;nc|ENSG00000133958|Q9P2D8|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;ENSG00000133958|ENST00000695012|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	600.815018	1199.61548	0.88667	0.00053273	-1.5764	-0.00094711	-0.68971	-0.00041439	600.8137735173015	42.873	0.37984	42.879	42.716	43.095	0.0057487	0.046163	-0.00062276	NaN	60.972	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	151850			33725	180	22297	22307				3			0.0236609016485545
LQLMAHNKVM	10	Oxidation (M)	_LQLM(Oxidation (M))AHNKVM_					0	0	1		nc|ENSG00000133958|Q9P2D8-2|UNC79;chr14:93540831-93542466|19|12.21|0.74|4.05|+|ENST00000621021|UNC79,UNC79;chr14:93532578-93537989|19|12.0|0.65|4.2|+|ENST00000621021|UNC79,UNC79;chr14:93529326-93532550|21|10.48|0.57|4.21|+|ENST00000621021|UNC79,UNC79;chr14:93524042-93528558|19|11.84|0.52|4.51|+|ENST00000621021|UNC79,UNC79;chr14:93477728-93487663|23|11.22|0.59|4.24|+|ENST00000621021|UNC79,UNC79;chr14:93474393-93477558|17|15.47|0.73|4.4|+|ENST00000555664|UNC79,UNC79;nc|ENSG00000133958|Q9P2D8|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;ENSG00000133958|ENST00000695012|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	600.815018	1199.61548	0.31957	0.000192	-0.7271	-0.00043685	-0.40753	-0.00024485	600.8141616304307	42.831	0.40625	42.781	42.572	42.978	-0.050308	-0.052024	0.00039775	NaN	60.972	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115920			33726	180	22297	22307				3			0.0236609016485545
LQLMILQVLH	10	Unmodified	_LQLMILQVLH_					0	0	0		ENSG00000154227|ENST00000679737|CERS3	ENSG00000154227|ENST00000679737|CERS3	ENSG00000154227|ENST00000679737|CERS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2469482421875	3	403.245893	1206.71585	2.718	0.001096	-0.28346	-0.00011431	2.4345	0.00098171	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.85939	1	11723	11723		21.686	0	1	15597000			33727	5262	22298	22308	38493	38493					0.12076070490184065
LQLPLAVP	8	Unmodified	_LQLPLAVP_					0	0	0		ENST00000368787.3_1_1:152552252-152552420:-|nuORF	ENST00000368787.3_1_1:152552252-152552420:-|nuORF	ENST00000368787.3_1_1:152552252-152552420:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.29461669921875	2	425.773471	849.53239	-0.1836	-7.8172E-05	-0.060408	-2.572E-05	-0.24401	-0.00010389	425.7751218285671	76.697	0.22081	76.746	76.652	76.873	0.049194					11	8	2	0	0	0	0.4196	1	7422	7422		19.36	5.5846	1	27791			33728	10603	22299	22309	38494	38494					0.10160464770854105
LQLPMRLLLI	10	Unmodified	_LQLPMRLLLI_					0	0	0			REV__ENST00000526600.1_1_11:12961012-12961237:+|nuORF	REV__ENST00000526600.1_1_11:12961012-12961237:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2646179199219	3	403.929905	1208.76789	0.032409	1.3091E-05	-0.6399	-0.00025848	-0.60749	-0.00024538	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.91151	1	3923	3923		7.3997	0.38104	1	2636600	+		33729	28213	22300	22310	38495	38495					0.1718523390397877
LQLPTLRPARS	11	Unmodified	_LQLPTLRPARS_					0	0	0		ENST00000373655.6_2_1:32229559-32229598:-|nuORF	ENST00000373655.6_2_1:32229559-32229598:-|nuORF	ENST00000373655.6_2_1:32229559-32229598:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3893432617188	2	626.380229	1250.7459	-1.2036	-0.0007539	3.0309	0.0018985	1.8273	0.0011446	626.382725526021	108.36	0.29773	108.38	108.2	108.5	0.020561					14	11	2	0	0	0	0.7434	1	11561	11561		23.523	0.48021	1	419060			33730	10750	22301	22311	38496	38496					0.1305614547973164
LQLRWQEYRE	10	Unmodified	_LQLRWQEYRE_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.2525634765625	3	474.249242	1419.7259	-0.55861	-0.00026492	-1.5728	-0.00074589	-2.1314	-0.0010108	474.24855266627486	28.241	0.60376	28.217	27.978	28.582	-0.023556					27	13	3	0	0	0	0.86698	1	1344	1344		28.081	1.3318	1	63700			33731	7193	22302	22312	38497	38497					0.03282349749133573
LQLSLNRLPLV	11	Unmodified	_LQLSLNRLPLV_					0	0	0			REV__ENST00000477617.5_1_1:153940199-153940346:+|nuORF	REV__ENST00000477617.5_1_1:153940199-153940346:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.3688354492188	2	633.40063	1264.78671	2.2612	0.0014322	0.49782	0.00031532	2.759	0.0017476	633.4005603621134	97.46	0.12308	97.405	97.314	97.437	-0.055542					4	2	2	0	0	0	0.17714	1	10487	10487		19.104	2.6304	1	39192	+		33732	27361	22303	22313	38498	38498					0.16490486799375503
LQLTNRRRW	9	Unmodified	_LQLTNRRRW_					0	0	0			REV__ENST00000490223.1_1_3:23959920-23960989:+|nuORF	REV__ENST00000490223.1_1_3:23959920-23960989:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.8143310546875	2	621.862538	1241.71052	0.81684	0.00050796	2.5611	0.0015927	3.378	0.0021006	621.8644947540632	88.015	0.3694	88.464	88.186	88.555	0.44892					12	8	2	0	0	0	0.20789	1	10313	10313		23.042	0	1	59426	+		33733	22011	22304	22314	38499	38499					0.09933527742600745
LQLVHSKLGSR	11	Unmodified	_LQLVHSKLGSR_					0	0	0			REV__CON__P01030	REV__CON__P01030	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.3701171875	2	619.372404	1236.73025	1.9872	0.0012308	-2.1821	-0.0013515	-0.19486	-0.00012069	619.3705755303217	101.25	1.7847	101.55	101.13	102.91	0.2999					90	48	3	0	0	0	0.73893	1	12302	12302		24.519	0.31644	1	2252000	+	+	33734	15959	22305	22315	38500	38500					0.12135858962687962
LQLVLAAP	8	Unmodified	_LQLVLAAP_					0	0	0		ENST00000531243.2_1_1:40041622-40042411:-|nuORF	ENST00000531243.2_1_1:40041622-40042411:-|nuORF	ENST00000531243.2_1_1:40041622-40042411:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.766357421875	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.83466	1	2701	2701		23.037	1.3344	1	818920			33735	13355	22306	22316	38501	38501					0.09792178253792372
LQLVMDDTL	9	Unmodified	_LQLVMDDTL_					0	0	0			REV__ENSG00000181350|ENST00000470794|LRRC75A	REV__ENSG00000181350|ENST00000470794|LRRC75A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.271728515625	2	524.273175	1046.5318	0.068728	3.6032E-05	-3.8279	-0.0020069	-3.7592	-0.0019708	524.2709698918767	75.989	0.87818	76.558	76.184	77.062	0.56836					57	21	4	0	0	0	0.15959	1	8622	8622		82.241	5.4664	1	1616600	+		33736	22453	22307	22317	38502	38502					0.01039257268826077
LQLWAAPLFV	10	Unmodified	_LQLWAAPLFV_					0	0	0			REV__ENST00000520262.5_1_8:42358674-42358761:-|nuORF	REV__ENST00000520262.5_1_8:42358674-42358761:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.3020629882812	2	579.33951	1156.66447	-0.0023473	-1.3599E-06	-1.6771	-0.00097163	-1.6795	-0.00097299	579.3383135522232	49.975	0.33498	50.82	50.599	50.934	0.84501					13	7	2	0	0	0	0.37624	1	4883	4883		23.042	0	1	230090	+		33737	28097	22308	22318	38503	38503					0.09240069787779248
LQMDSEDPL	9	Unmodified	_LQMDSEDPL_					0	0	0		nc|ENSG00000143674|Q5TCX8-3|MAP3K21;ENSG00000143674|ENST00000366624|MAP3K21	nc|ENSG00000143674|Q5TCX8-3|MAP3K21	nc|ENSG00000143674|Q5TCX8-3|MAP3K21	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.1459350585938	2	524.23679	1046.45903	0.14191	7.4392E-05	-3.5126	-0.0018414	-3.3707	-0.001767	524.2350046327156	32.752	0.40385	32.763	32.593	32.997	0.010899					14	9	2	0	0	0	0.20789	1	1843	1843		26.693	0	1	51358			33738	4657	22309	22319	38504	38504					-0.062344965245983985
LQMMMKMM	8	Oxidation (M)	_LQMMMKMM(Oxidation (M))_		LQM(0.006)M(0.006)M(0.025)KM(0.025)M(0.937)		LQM(-22)M(-22)M(-16)KM(-16)M(16)	0	0	1		ENST00000398578.2_1_6:66012886-66012994:+|nuORF	ENST00000398578.2_1_6:66012886-66012994:+|nuORF	ENST00000398578.2_1_6:66012886-66012994:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.22900390625	2	530.23003	1058.44551	-1.631	-0.0008648	-1.943	-0.0010302	-3.574	-0.001895	530.2289363075297	29.564	0.56219	29.564	29.293	29.856	0					38	22	2	0	0	0	0.91005	1	1286	1286		42.474	11.971	5	85876			33739	11184	22310	22320	38505	38505		183			-0.08137808425044568
LQMQLKPGEL	10	Unmodified	_LQMQLKPGEL_					0	0	0			REV__ENST00000493208.1_1_5:131824910-131825033:-|nuORF	REV__ENST00000493208.1_1_5:131824910-131825033:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.8259887695312	2	578.823366	1155.63218	-0.55117	-0.00031903	3.5836	0.0020743	3.0325	0.0017553	578.8252293904699	65.248	0.34756	65.285	65.115	65.462	0.037849					25	15	2	0	0	0	0.86802	1	5792	5792		27.047	2.8446	1	205380	+		33740	27686	22311	22321	38506	38506					0.06058914322511555
LQNFYETN	8	Unmodified	_LQNFYETN_					0	0	0			REV__ENST00000441170.1_1_4:118496255-118496735:-|nuORF	REV__ENST00000441170.1_1_4:118496255-118496735:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8087158203125	2	514.737814	1027.46108	0.086776	4.4667E-05	2.8269	0.0014551	2.9137	0.0014998	514.7393261741507	49.996	0.41875	49.993	49.8	50.219	-0.0030327					17	10	2	0	0	0	0.4196	1	4189	4189		40.778	12.896	1	66875	+		33741	18506	22312	22322	38507	38507					-0.05155699724468832
LQNLFTQQHK	10	Unmodified	_LQNLFTQQHK_					0	0	0			REV__nc|ENSG00000155313|Q9UHP3|USP25	REV__nc|ENSG00000155313|Q9UHP3|USP25	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7184753417969	3	419.56305	1255.66732	0.21907	9.1913E-05	-2.7754	-0.0011645	-2.5564	-0.0010726	419.5625493749976	43.692	0.6991	43.749	43.397	44.097	0.056744					28	16	3	0	0	0	0.37624	1	3020	3020		26.063	0	1	341310	+		33742	20423	22313	22323	38508	38508					0.04971293174639868
LQNNEAISYVI	11	Unmodified	_LQNNEAISYVI_					0	0	0		ENST00000377482.9_1_1:8072312-8072462:-|nuORF	ENST00000377482.9_1_1:8072312-8072462:-|nuORF	ENST00000377482.9_1_1:8072312-8072462:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.331298828125	2	632.33261	1262.65067	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.19	1	113.29	112.79	113.79	0.10217								0	0	0	0.56276	1	12160	12160		11.097	1.3911	1				33743	10839	22314	22324	38509	38509					0.029847474980442712
LQNNYTNIDM	10	Unmodified	_LQNNYTNIDM_					0	0	0			REV__nc|ENSG00000148814|Q9C0I9-2|LRRC27	REV__nc|ENSG00000148814|Q9C0I9-2|LRRC27	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2477111816406	3	409.188772	1224.54449	1.0334	0.00042286	2.422	0.00099107	3.4555	0.0014139	409.1899977169303	27.94	0.3105	27.686	27.543	27.853	-0.25465					10	6	2	0	0	0	0.37624	1	1670	1670		30.569	0	1	38337	+		33744	29925	22315	22325	38510	38510					-0.05880331338948963
LQPGRKEPT	9	Unmodified	_LQPGRKEPT_					0	0	0			REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7611083984375	2	513.290548	1024.56654	-0.18588	-9.5408E-05	0.25073	0.0001287	0.064853	3.3288E-05	513.2905434495586	86.088	2.589	86.536	84.871	87.46	0.44736					91	63	2	0	0	0	0.20789	1	9865	9865		34.173	3.6689	1	167400	+		33745	19487	22316	22326	38511	38511					0.055242611917947215
LQPGRKEPT	9	Unmodified	_LQPGRKEPT_					0	0	0			REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	513.290548	1024.56654	-0.051052	-2.6204E-05	-0.29117	-0.00014946	-0.34222	-0.00017566	513.2903470766232	86.332	3.1513	86.399	84.898	88.049	0.067444	-0.053638	0.00037572	NaN	32.812	132	72	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164900	+		33746	19487	22316	22326							0.055242611917947215
LQPGRKEPT	9	Unmodified	_LQPGRKEPT_					0	0	0			REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	513.290548	1024.56654	1.2112	0.00062172	-1.4002	-0.00071872	-0.18898	-9.7003E-05	513.2897156177058	86.478	3.1424	86.404	84.367	87.509	-0.073769	-0.048643	-0.00076282	NaN	32.812	125	72	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164810	+		33747	19487	22316	22326							0.055242611917947215
LQPGRKEPT	9	Unmodified	_LQPGRKEPT_					0	0	0			REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	513.290548	1024.56654	0.41297	0.00021197	-0.80545	-0.00041343	-0.39248	-0.00020146	513.2900190577583	86.239	3.7986	86.295	83.976	87.775	0.055649	-0.15832	-0.00015223	NaN	32.812	141	87	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	160920	+		33748	19487	22316	22326							0.055242611917947215
LQPGRKEPT	9	Unmodified	_LQPGRKEPT_					0	0	0			REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	513.290548	1024.56654	-0.32904	-0.00016889	0.010987	5.6395E-06	-0.31805	-0.00016325	513.2904096528551	86.25	3.2437	86.444	84.377	87.621	0.19379	-0.0090872	0.00068591	NaN	32.812	126	75	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	198710	+		33749	19487	22316	22326							0.055242611917947215
LQPGRKEPT	9	Unmodified	_LQPGRKEPT_					0	0	0			REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	REV__nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	513.290548	1024.56654	0.68432	0.00035126	-0.90387	-0.00046395	-0.21955	-0.00011269	513.2899367008746	86.491	2.9474	86.64	84.734	87.681	0.14902	0.18701	-0.00025326	NaN	32.812	120	68	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	145900	+		33750	19487	22316	22326							0.055242611917947215
LQPKRQLVLA	10	Unmodified	_LQPKRQLVLA_					0	0	0			REV__ENSG00000165370|ENST00000651716|GPR101	REV__ENSG00000165370|ENST00000651716|GPR101	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	583.3772583007812	2	583.374415	1164.73428	0.63476	0.0003703	3.8064	0.0022205	4.4411	0.0025908	583.376388327019	44.912	1.522	44.924	44.229	45.751	0.012058					108	36	4	0	0	0	0.86218	1	3188	3188		32.812	7.2384	1	1529200	+		33751	21176	22317	22327	38512	38512					0.15849948456411767
LQPKVKRLKVL	11	Unmodified	_LQPKVKRLKVL_					0	0	0			REV__ENSG00000171103|ENST00000306108|TRMT61B	REV__ENSG00000171103|ENST00000306108|TRMT61B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7877197265625	3	441.306252	1320.89693	-0.14991	-6.6158E-05	-2.9202	-0.0012887	-3.0701	-0.0013548	441.30477099690796	41.33	0.95183	41.285	41.09	42.042	-0.045467					37	24	2	0	0	0	0.17955	1	2781	2781		2.8518	1.5299	1	127260	+		33752	21711	22318	22328	38513	38513					0.24931331858397243
LQPLLSSSE	9	Unmodified	_LQPLLSSSE_					0	0	0		ENSG00000173064|ENST00000682272|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4;nc|ENSG00000173064|Q9Y4D8-2|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7977600097656	2	487.263665	972.512776	-0.087211	-4.2495E-05	0.11124	5.4203E-05	0.024029	1.1709E-05	487.26369656942506	72.176	0.52026	72.214	71.863	72.383	0.037155					21	18	2	0	0	0	0.20789	1	6875	6875		19.997	11.765	1	32965			33753	6820	22319	22329	38514	38514					0.02542043969435781
LQPLLSSSE	9	Unmodified	_LQPLLSSSE_					0	0	0		ENSG00000173064|ENST00000682272|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4;nc|ENSG00000173064|Q9Y4D8-2|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	487.263665	972.512776	-0.62865	-0.00030632	0.74555	0.00036328	0.1169	5.696E-05	487.2640773777195	71.888	0.53558	71.849	71.637	72.173	-0.039009	-0.13968	-0.00049781	NaN	19.997	22	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51553			33754	6820	22319	22329							0.02542043969435781
LQPLLSSSE	9	Unmodified	_LQPLLSSSE_					0	0	0		ENSG00000173064|ENST00000682272|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4;nc|ENSG00000173064|Q9Y4D8-2|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	487.263665	972.512776	-2.058	-0.0010028	2.0218	0.00098513	-0.036218	-1.7648E-05	487.26453664468374	71.864	0.51808	71.904	71.654	72.173	0.040222	-0.084934	0.00074588	NaN	19.997	29	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59910			33755	6820	22319	22329							0.02542043969435781
LQPLPPLLASA	11	Unmodified	_LQPLPPLLASA_					0	0	0		ENST00000394805.7_1_5:138629377-138643017:+|nuORF	ENST00000394805.7_1_5:138629377-138643017:+|nuORF	ENST00000394805.7_1_5:138629377-138643017:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3397216796875	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.75921	1	12527	12527		19.997	2.6318	1	4071000			33756	11080	22320	22330	38515	38515					0.11535748579603933
LQPPGTPP	8	Unmodified	_LQPPGTPP_					0	0	0		ENST00000285106.10_1_18:47813982-47814060:-|nuORF	REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	REV__ENST00000336138.3_1_8:143816880-143817129:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.72381591796875	2	403.723978	805.433404	-1.8572	-0.00074981	2.1457	0.00086627	0.28846	0.00011646	403.7247227583041	64.772	1.8283	64.897	63.712	65.54	0.12545					133	73	3	0	0	0	0.92973	1	5735	5735		50.025	2.1089	1	1035700			33757	25178	22321	22331	38516	38516					0.022904418059511045
LQPPIRIC	8	Unmodified	_LQPPIRIC_					0	0	0			REV__ENST00000064778.8_1_11:73113059-73113341:-|nuORF	REV__ENST00000064778.8_1_11:73113059-73113341:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.24310302734375	2	470.275855	938.537157	-0.11198	-5.2662E-05	-3.3501	-0.0015755	-3.4621	-0.0016281	470.27495281170974	84.069	0.43565	84.136	83.898	84.333	0.066727					12	9	2	0	0	0	0.4196	1	8389	8389		25.45	6.0902	1	45969	+		33758	24070	22322	22332	38517	38517					0.06543025641951772
LQPQRPKTIRQ	11	Unmodified	_LQPQRPKTIRQ_					0	0	0		ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000605810.1_1_3:70174691-70175321:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.9410400390625	3	455.608882	1363.80482	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.547	1	69.682	69.182	70.182	0.13522								0	0	0	0.56276	1	6292	6292		14.086	0	1				33759	14435	22323	22333	38518	38518					0.13746621774066625
LQPRVAFV	8	Unmodified	_LQPRVAFV_					0	0	0		ENSG00000105376|ENST00000221980|ICAM5;ENST00000586004.1_1_19:10400719-10402179:+|nuORF	ENSG00000105376|ENST00000221980|ICAM5	ENSG00000105376|ENST00000221980|ICAM5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.28009033203125	2	465.281995	928.549437	-1.4902	-0.00069338	-2.801	-0.0013033	-4.2912	-0.0019966	465.28061982816973	88.721	1.2176	89.191	88.797	90.015	0.47068					80	29	4	0	0	0	0.88915	1	10496	10496		35.201	4.6971	1	1086000			33760	2211	22324	22334	38519	38519					0.08230385376657523
LQPSEPEH	8	Unmodified	_LQPSEPEH_					0	0	0			REV__ENSG00000066777|ENST00000262215|ARFGEF1	REV__ENSG00000066777|ENST00000262215|ARFGEF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.723388671875	2	468.724707	935.43486	-1.2296	-0.00057635	-1.9244	-0.000902	-3.154	-0.0014784	468.7238369987016	86.792	1.5636	87.247	86.655	88.219	0.4543					99	37	4	0	0	0	0.884	1	10195	10195		33.516	0	1	4103600	+		33761	16529	22325	22335	38520	38520					-0.03543968895951366
LQPSFPGR	8	Unmodified	_LQPSFPGR_					0	0	0		ENST00000555933.1_1_14:51449651-51452878:-|nuORF;ENSG00000100505|ENST00000684578|TRIM9;nc|ENSG00000100505|Q9C026-4|TRIM9	ENST00000555933.1_1_14:51449651-51452878:-|nuORF	ENST00000555933.1_1_14:51449651-51452878:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7506103515625	2	451.248152	900.481751	-0.14168	-6.3933E-05	1.7703	0.00079883	1.6286	0.0007349	451.2488328539834	65.707	0.84668	65.718	65.246	66.093	0.010452					75	44	3	0	0	0	0.90465	1	6157	6157		40.573	5.3719	1	804770			33762	1845	22326	22336	38521	38521					0.02752935445857929
LQPSNQSY	8	Unmodified	_LQPSNQSY_					0	0	0		ENSG00000174225|ENST00000450049|ARL13A	ENSG00000174225|ENST00000450049|ARL13A	ENSG00000174225|ENST00000450049|ARL13A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7246398925781	2	468.724707	935.43486	1.0684	0.00050079	-3.4491	-0.0016167	-2.3807	-0.0011159	468.7229595267066	94.221	0.99142	94.654	94.37	95.361	0.4324					49	25	3	0	0	0	0.90523	1	11244	11244		40.778	6.6056	1	660150			33763	6916	22327	22337	38522	38522					-0.03543968895951366
LQPSNQSY	8	Unmodified	_LQPSNQSY_					0	0	0		ENSG00000174225|ENST00000450049|ARL13A	ENSG00000174225|ENST00000450049|ARL13A	ENSG00000174225|ENST00000450049|ARL13A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7234191894531	2	468.724707	935.43486	-0.58063	-0.00027215	-3.1666	-0.0014842	-3.7472	-0.0017564	468.72346030200146	77.011	2.0488	77.579	77.289	79.337	0.56836					141	50	5	0	0	0	0.89494	1	8782	8782		37.159	5.2042	1	13648000			33764	6916	22327	22337	38523	38523					-0.03543968895951366
LQPSNQSY	8	Unmodified	_LQPSNQSY_					0	0	0		ENSG00000174225|ENST00000450049|ARL13A	ENSG00000174225|ENST00000450049|ARL13A	ENSG00000174225|ENST00000450049|ARL13A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7239990234375	2	468.724707	935.43486	-0.39652	-0.00018586	-2.0289	-0.000951	-2.4254	-0.0011369	468.7236452143359	94.367	1.0112	94.803	94.514	95.525	0.43539					45	25	2	0	0	0	0.87792	1	11304	11304		31.53	3.6476	1	892940			33765	6916	22327	22337	38524	38524					-0.03543968895951366
LQPWIVVNLVV	11	Unmodified	_LQPWIVVNLVV_					0	0	0		ENST00000495329.1_1_2:202488980-202490962:-|nuORF;nc|ENSG00000155755|Q96Q45-4|TMEM237;nc|ENSG00000155755|Q96Q45-2|TMEM237;ENSG00000155755|ENST00000409883|TMEM237;nc|ENSG00000155755|Q96Q45-5|TMEM237;nc|ENSG00000155755|Q96Q45-3|TMEM237	ENST00000495329.1_1_2:202488980-202490962:-|nuORF	ENST00000495329.1_1_2:202488980-202490962:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3946533203125	2	640.392273	1278.76999	-0.69345	-0.00044408	2.0468	0.0013107	1.3533	0.00086667	640.3933606010097	53.872	1.0072	53.872	53.507	54.514	0					69	30	3	0	0	0	0.75495	1	4468	4468		20.947	1.8434	1	206080			33766	5339	22328	22338	38525	38525					0.14175985913379918
LQQAIQEIRKL	11	Unmodified	_LQQAIQEIRKL_					0	0	0			REV__ENSG00000104884|ENST00000391945|ERCC2	REV__ENSG00000104884|ENST00000391945|ERCC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.2729797363281	3	447.273388	1338.79833	2.7481	0.0012291	-3.8113	-0.0017047	-1.0632	-0.00047554	447.2715969592816	107.28	1.0213	107.25	106.57	107.59	-0.034134					90	23	5	0	0	0	0.71803	1	11878	11878		28.577	0	1	9462500	+		33767	17484	22329	22339	38526	38526					0.14248683822665953
LQQAIQEIRKL	11	Unmodified	_LQQAIQEIRKL_					0	0	0			REV__ENSG00000104884|ENST00000391945|ERCC2	REV__ENSG00000104884|ENST00000391945|ERCC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2729797363281	3	447.273388	1338.79833	-1.2893	-0.00057667	-0.045837	-2.0502E-05	-1.3351	-0.00059717	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.74002	1	11491	11491		24.276	1.7143	1	31263000	+		33768	17484	22329	22339	38527	38527					0.14248683822665953
LQQAVQACID	10	Carbamidomethyl (C)	_LQQAVQAC(Carbamidomethyl (C))ID_	LQQAVQAC(1)ID		LQQAVQAC(57)ID		0	1	0		ENST00000473515.5_1_6:108067761-108070999:-|nuORF;ENSG00000146285|ENST00000369020|SCML4;nc|ENSG00000146285|Q8N228-3|SCML4;nc|ENSG00000146285|Q8N228-2|SCML4;nc|ENSG00000010803|Q96GD3-6|SCMH1;nc|ENSG00000010803|Q96GD3-5|SCMH1;nc|ENSG00000010803|Q96GD3-4|SCMH1;nc|ENSG00000010803|Q96GD3-3|SCMH1;nc|ENSG00000010803|Q96GD3-2|SCMH1;nc|ENSG00000010803|Q96GD3|SCMH1;ENSG00000010803|ENST00000695335|SCMH1	ENST00000473515.5_1_6:108067761-108070999:-|nuORF;ENSG00000146285|ENST00000369020|SCML4;nc|ENSG00000010803|Q96GD3-6|SCMH1	ENSG00000146285|ENST00000369020|SCML4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	573.2894897460938	2	573.284605	1144.55466	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.604	1	40.685	40.185	41.185	0.081345								0	0	0	0.45132	1	2592	2592		56.721	17.468	1				33769	4835;12283;772	22330	22340	38528	38528	7				-0.011837236137125728
LQQDQPDI	8	Unmodified	_LQQDQPDI_					0	0	0		ENSG00000172031|ENST00000370383|EPHX4	ENSG00000172031|ENST00000370383|EPHX4	ENSG00000172031|ENST00000370383|EPHX4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27740478515625	2	478.737814	955.461075	-1.3302	-0.00063683	-0.28597	-0.00013691	-1.6162	-0.00077374	478.7370297010424	85.779	1.1475	86.226	85.782	86.93	0.44736					42	27	2	0	0	0	0.4196	1	10063	10063		29.15	0	1	232820			33770	6736	22331	22341	38529	38529					-0.018436997244748454
LQQELKAKRK	10	Unmodified	_LQQELKAKRK_					0	0	0		nc|ENSG00000138778|Q02224-3|CENPE;chr4:103163256-103174736|63|39.62|0.34|6.87|-|ENST00000380026|CENPE,CENPE;chr4:103138452-103140256|63|22.33|0.54|5.36|-|ENST00000380026|CENPE,CENPE;ENSG00000138778|ENST00000265148|CENPE;chr4:103177046-103180311|63|37.73|0.43|6.47|-|0|CENPE,CENPE|1	nc|ENSG00000138778|Q02224-3|CENPE	nc|ENSG00000138778|Q02224-3|CENPE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.3926391601562	2	621.388054	1240.76155	4.2384	0.0026337	3.5756	0.0022219	7.814	0.0048555	621.3901654110842	104.31	1.8962	104.53	104.05	105.95	0.2268					124	45	4	0	0	0	0.86471	1	12734	12734		30.318	1.1477	1	1273000			33771	411	22332	22342	38530	38530					0.15080431996761945
LQQGEQRLDQ	10	Unmodified	_LQQGEQRLDQ_					0	0	0			REV__ENSG00000137877|ENST00000320955|SPTBN5	REV__ENSG00000137877|ENST00000320955|SPTBN5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.54046630859375	3	405.542314	1213.60511	2.2598E-05	9.1643E-09	-4.4167	-0.0017911	-4.4166	-0.0017911	405.5404180707205	38.155	0.99045	38.127	37.774	38.765	-0.027843					51	22	3	0	0	0	0.86195	1	2559	2559		33.039	2.9003	1	420290	+		33772	19422	22333	22343	38531	38531					0.006855220356555947
LQQLGLLVSKV	11	Unmodified	_LQQLGLLVSKV_					0	0	0		nc|ENSG00000090659|Q9NNX6-8|CD209;nc|ENSG00000090659|Q9NNX6-7|CD209	nc|ENSG00000090659|Q9NNX6-8|CD209	nc|ENSG00000090659|Q9NNX6-8|CD209	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.379638671875	2	599.381906	1196.74926	-0.35766	-0.00021438	-2.6712	-0.0016011	-3.0289	-0.0018155	599.3801693786043	103.37	3.7428	103.41	103.03	106.77	0.041481					250	89	5	0	0	0	0.66929	2	11269	11221;11269		36.447	1.1477	1	13277000			33773	14799	22334	22344	38532;38533	38533					0.15875395533748815
LQQLVLVPGHL	11	Unmodified	_LQQLVLVPGHL_					0	0	0		nc|ENSG00000137709|Q9UKI9-3|POU2F3;ENSG00000137709|ENST00000543440|POU2F3;nc|ENSG00000137709|Q9UKI9-2|POU2F3	nc|ENSG00000137709|Q9UKI9-3|POU2F3	nc|ENSG00000137709|Q9UKI9-3|POU2F3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.24566650390625	3	406.251924	1215.73394	-1.9281	-0.0007833	-4.096	-0.001664	-6.0241	-0.0024473	406.2491934436226	113.19	0.20975	113.16	113.01	113.22	-0.032333					17	5	4	0	0	0	0.74405	1	12066	12066		23.378	1.6922	1	688940			33774	4229	22335	22345	38534	38534					0.13470528736570486
LQQPISGA	8	Unmodified	_LQQPISGA_					0	0	0		ENSG00000115504|ENST00000431489|EHBP1;nc|ENSG00000115504|Q8NDI1-2|EHBP1;nc|ENSG00000115504|Q8NDI1|EHBP1	ENSG00000115504|ENST00000431489|EHBP1	ENSG00000115504|ENST00000431489|EHBP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	2	407.226885	812.439217	-0.40088	-0.00016325	1.1638	0.00047395	0.76296	0.0003107	407.22756243338296	33.014	0.43448	32.96	32.853	33.288	-0.054337					15	11	2	0	0	0	0.4196	1	1969	1969		7.6903	0.49693	1	20142			33775	2850	22336	22346	38535	38535					0.025495403176250875
LQQQMALQQPK	11	Unmodified	_LQQQMALQQPK_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2576599121094	3	438.239578	1311.69691	0.25678	0.00011253	2.7006	0.0011835	2.9574	0.0012961	438.2407291890776	29.845	0.11604	29.856	29.751	29.868	0.01123					6	5	2	0	0	0	0.17396	1	1282	1282		38.714	0	1	14500	+		33776	21394	22337	22347	38536	38536					0.05352489128472371
LQQRHAIRPLL	11	Unmodified	_LQQRHAIRPLL_					0	0	0		ENST00000449005.5_1_1:783104-787332:+|nuORF	ENST00000449005.5_1_1:783104-787332:+|nuORF	ENST00000449005.5_1_1:783104-787332:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.9432373046875	3	448.945606	1343.81499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.978	1	77.07	76.57	77.57	0.091438								0	0	0	0.56276	1	7188	7188		17.833	1.3033	1				33777	11869	22338	22348	38537	38537					0.1568322949931371
LQQRLLQLQRL	11	Unmodified	_LQQRLLQLQRL_					0	0	0		ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.76263427734375	3	470.296415	1407.86742	0.18609	8.7519E-05	-3.006	-0.0014137	-2.8199	-0.0013262	470.6282189232374	35.577	0.15026	35.683	35.651	35.801	0.10603					6	5	2	0	0	0	0.1767	1	1895	1895		18.531	5.0231	1	39869			33778	4244	22339	22349	38538	38538					0.17979767842257388
LQQRLLVRSS	10	Unmodified	_LQQRLLVRSS_					0	0	0			REV__ENSG00000068323|ENST00000315869|TFE3	REV__ENSG00000068323|ENST00000315869|TFE3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.58026123046875	3	400.578811	1198.7146	3.1805	0.001274	0.74448	0.00029822	3.925	0.0015723	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.86225	1	12393	12393		32.751	2.1817	1	4827300	+		33779	16556	22340	22350	38539	38539					0.12319572445653648
LQQSHSDLPVQ	11	Unmodified	_LQQSHSDLPVQ_					0	0	0			REV__ENSG00000131864|ENST00000254181|USP29	REV__ENSG00000131864|ENST00000254181|USP29	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.31396484375	2	626.320034	1250.62551	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.519	1	73.602	73.102	74.102	0.083138								0	0	0	0.55935	1	6751	6751		58.246	3.5239	1		+		33780	18973	22341	22351	38540	38540					0.010226926954601367
LQQSLQLVVAI	11	Unmodified	_LQQSLQLVVAI_					0	0	0			REV__nc|ENSG00000181856|P14672-2|SLC2A4	REV__nc|ENSG00000181856|P14672-2|SLC2A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.3695678710938	2	606.371538	1210.72852	-1.2685	-0.00076921	-2.0387	-0.0012362	-3.3072	-0.0020054	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.73893	1	9492	9492		24.519	2.8334	1	823240	+		33781	22484	22342	22352	38541	38541					0.13158805154102993
LQQVGLDP	8	Unmodified	_LQQVGLDP_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.18548583984375	2	435.239993	868.465432	1.7713	0.00077092	0.11434	4.9765E-05	1.8856	0.00082068	435.2403431071194	107.08	1.0123	107.18	106.86	107.87	0.10396					54	37	2	0	0	0	0.4196	1	13011	13011		35.201	15.841	1	621450			33782	7276;13370	22343	22353	38542	38542					0.025938094890989305
LQQVGLDP	8	Unmodified	_LQQVGLDP_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	435.239993	868.465432	-0.9619	-0.00041866	2.6955	0.0011732	1.7336	0.00075454	435.2413237677416	107.28	0.54398	107.28	107.02	107.57	0	0.087795	0.001162	NaN	26.796	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140770			33783	7276;13370	22343	22353							0.025938094890989305
LQQVGLDP	8	Unmodified	_LQQVGLDP_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	435.239993	868.465432	2.7195	0.0011836	-1.4189	-0.00061757	1.3006	0.00056607	435.23942233822186	107.32	0.57893	107.29	107.01	107.59	-0.034134	0.097265	-0.0024195	NaN	26.796	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143000			33784	7276;13370	22343	22353							0.025938094890989305
LQQVGLDP	8	Unmodified	_LQQVGLDP_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	435.239993	868.465432	2.2515	0.00097993	-1.0275	-0.00044719	1.224	0.00053274	435.2396126251439	107.09	0.4483	107.13	106.9	107.34	0.035622	-0.061953	-0.0020788	NaN	26.796	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144030			33785	7276;13370	22343	22353							0.025938094890989305
LQQVGLDP	8	Unmodified	_LQQVGLDP_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	435.239993	868.465432	-1.5242	-0.0006634	2.3951	0.0010424	0.87086	0.00037903	435.2409914588616	106.98	0.62859	107.12	106.9	107.53	0.13866	-0.072521	0.00090047	NaN	26.796	29	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	346520			33786	7276;13370	22343	22353							0.025938094890989305
LQQVGLDP	8	Unmodified	_LQQVGLDP_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	435.239993	868.465432	0.73625	0.00032044	0.42756	0.00018609	1.1638	0.00050654	435.2401986569927	107.11	0.68095	107.2	106.91	107.59	0.091255	0.0075699	-0.00081221	NaN	26.796	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	225900			33787	7276;13370	22343	22353							0.025938094890989305
LQQVGLDP	8	Unmodified	_LQQVGLDP_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	435.239993	868.465432	-1.823	-0.00079346	2.9089	0.0012661	1.0858	0.0004726	435.24124882845416	107.11	0.68595	107.14	106.89	107.58	0.036125	-0.047816	0.0013477	NaN	26.796	29	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	266040			33788	7276;13370	22343	22353							0.025938094890989305
LQQWLGQLEH	10	Unmodified	_LQQWLGQLEH_					0	0	0		nc|ENSG00000204614|Q6P9F5-2|TRIM40	nc|ENSG00000204614|Q6P9F5-2|TRIM40	nc|ENSG00000204614|Q6P9F5-2|TRIM40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3279418945312	2	626.327662	1250.64077	-0.52598	-0.00032944	0.48966	0.00030669	-0.036323	-2.275E-05	626.3277375544901	53.044	1.0318	53.02	52.658	53.69	-0.023849					62	25	3	0	0	0	0.81117	1	4739	4739		26.693	0	1	183520			33789	15212	22344	22354	38543	38543					0.025476042833361134
LQRAAQCF	8	Unmodified	_LQRAAQCF_					0	0	0			REV__nc|ENSG00000173064|Q9Y4D8-4|HECTD4	REV__nc|ENSG00000173064|Q9Y4D8-4|HECTD4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7231140136719	2	468.739637	935.464721	-0.0094525	-4.4308E-06	0.66554	0.00031196	0.65608	0.00030753	468.7394665619606	77.176	0.17223	77.577	77.5	77.672	0.40137					5	3	2	0	0	0	0.4196	1	8780	8780		25.45	1.2474	1	107610	+		33790	21883	22345	22355	38544	38544					-0.005593084316160457
LQRAKPSN	8	Unmodified	_LQRAKPSN_					0	0	0		ENSG00000116273|ENST00000377648|PHF13	ENSG00000116273|ENST00000377648|PHF13	ENSG00000116273|ENST00000377648|PHF13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.263427734375	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.88185	1	7777	7777		32.812	8.6097	1	1458600			33791	2914	22346	22356	38545	38545					0.054357228488470355
LQRHLLLGH	9	Unmodified	_LQRHLLLGH_					0	0	0			REV__ENSG00000179532|ENST00000254579|DNHD1	REV__ENSG00000179532|ENST00000254579|DNHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.7637329101562	2	543.830175	1085.6458	0.21179	0.00011518	-0.68464	-0.00037233	-0.47285	-0.00025715	543.8299159154501	31.735	0.25645	31.842	31.717	31.973	0.10707					8	5	2	0	0	0	0.20789	1	2186	2186		26.796	0	1	47976	+		33792	22341	22347	22357	38546	38546					0.10639952936617192
LQRIGLIFLH	10	Unmodified	_LQRIGLIFLH_					0	0	0		nc|ENSG00000173200|Q460N3-2|PARP15	nc|ENSG00000173200|Q460N3-2|PARP15	nc|ENSG00000173200|Q460N3-2|PARP15	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.92938232421875	3	403.920397	1208.73936	-0.47598	-0.00019226	2.4153	0.00097561	1.9394	0.00078335	404.2559016637448	47.145	0.11555	47.057	46.966	47.082	-0.087646					5	3	2	0	0	0	0.37624	1	3496	3496		12.207	0.27431	1	39021			33793	15101	22348	22358	38547	38547					0.14334252319008556
LQRIGLIFLH	10	Unmodified	_LQRIGLIFLH_					0	0	0		nc|ENSG00000173200|Q460N3-2|PARP15	nc|ENSG00000173200|Q460N3-2|PARP15	nc|ENSG00000173200|Q460N3-2|PARP15	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9292907714844	3	403.920397	1208.73936	0.50814	0.00020525	-1.5221	-0.00061482	-1.014	-0.00040957	404.2541992358231	45.171	0.24674	45.634	45.47	45.717	0.46313					6	5	2	0	0	0	0.37624	1	4183	4183		4.3388	0	1	118380			33794	15101	22348	22358	38548	38548					0.14334252319008556
LQRIHAEIKN	10	Unmodified	_LQRIHAEIKN_					0	0	0		ENSG00000164985|ENST00000380733|PSIP1	ENSG00000164985|ENST00000380733|PSIP1	ENSG00000164985|ENST00000380733|PSIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3549194335938	2	611.356754	1220.69895	0.85002	0.00051967	-2.1096	-0.0012897	-1.2596	-0.00077008	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.86218	1	9495	9495		32.812	6.1195	1	6836400			33795	6035	22349	22359	38549	38549					0.09743285928584555
LQRKPPML	8	Unmodified	_LQRKPPML_					0	0	0		ENSG00000178921|ENST00000314666|PFAS	ENSG00000178921|ENST00000314666|PFAS	ENSG00000178921|ENST00000314666|PFAS	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958984375	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.709	1	56.781	56.281	57.281	0.071835								0	0	0	0.29452	1	4778	4778		33.516	0.70317	1				33796	7231	22350	22360	38550	38550					0.08783001050335315
LQRLGIRLQVG	11	Unmodified	_LQRLGIRLQVG_					0	0	0			REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	REV__ENST00000344823.9_1_16:3451289-3451709:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.2658996582031	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.745	1	48.745	48.245	49.245	0								0	0	0	0.56276	1	3801	3801		17.833	0	1		+		33797	25307	22351	22361	38551	38551					0.1617213823367365
LQRLKNGT	8	Unmodified	_LQRLKNGT_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.2801513671875	2	465.279983	928.545414	-1.4902	-0.00069338	1.5219	0.00070811	0.031666	1.4734E-05	465.28061982816973	88.721	1.2176	89.191	88.797	90.015	0.47068					80	29	4	0	0	0	0.89043	1	10520	10520		35.618	5.1146	1	1086000	+		33798	18751	22352	22362	38552	38552					0.07828295882939074
LQRLLPCAL	9	Unmodified	_LQRLLPCAL_					0	0	0			REV__ENSG00000164880|ENST00000404767|INTS1	REV__ENSG00000164880|ENST00000404767|INTS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8089599609375	2	513.810062	1025.60557	-0.47161	-0.00024232	-1.6761	-0.00086122	-2.1478	-0.0011035	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.76996	1	4041	4041		33.516	1.5607	1	1552900	+		33799	21124	22353	22363	38553	38553					0.09379270221802471
LQRMGLLPV	9	Unmodified	_LQRMGLLPV_					0	0	0			REV__ENST00000513216.5_3_4:68380340-68383883:-|nuORF	REV__ENST00000513216.5_3_4:68380340-68383883:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087768554688	2	513.810062	1025.60557	-1.4445	-0.00074222	-0.71223	-0.00036595	-2.1568	-0.0011082	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.69914	2	3726	3726;3783		40.573	2.2429	1	1675700	+		33800	27992	22354	22364	38554;38555	38554					0.09379270221802471
LQRMGLLPV	9	Unmodified	_LQRMGLLPV_					0	0	0			REV__ENST00000513216.5_3_4:68380340-68383883:-|nuORF	REV__ENST00000513216.5_3_4:68380340-68383883:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087768554688	2	513.810062	1025.60557	-1.4174	-0.00072826	-0.72923	-0.00037469	-2.1466	-0.0011029	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.7932	1	4020	4020		24.203	2.2429	1	1977600	+		33801	27992	22354	22364	38556	38556					0.09379270221802471
LQRMGLLPV	9	Unmodified	_LQRMGLLPV_					0	0	0			REV__ENST00000513216.5_3_4:68380340-68383883:-|nuORF	REV__ENST00000513216.5_3_4:68380340-68383883:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8088989257812	2	513.810062	1025.60557	-0.43911	-0.00022562	-1.7271	-0.0008874	-2.1662	-0.001113	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.74721	1	4272	4272		37.159	2.9866	1	1606900	+		33802	27992	22354	22364	38557	38557					0.09379270221802471
LQRMGLLPV	9	Unmodified	_LQRMGLLPV_					0	0	0			REV__ENST00000513216.5_3_4:68380340-68383883:-|nuORF	REV__ENST00000513216.5_3_4:68380340-68383883:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8087768554688	2	513.810062	1025.60557	-0.21927	-0.00011266	-1.9846	-0.0010197	-2.2038	-0.0011323	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.7932	1	3887	3887		18.324	0	1	1550000	+		33803	27992	22354	22364	38558	38558					0.09379270221802471
LQRMPVQYI	9	Unmodified	_LQRMPVQYI_					0	0	0		ENSG00000114735|ENST00000232854|HEMK1;ENST00000448997.5_1_3:50608680-50617422:+|nuORF	ENSG00000114735|ENST00000232854|HEMK1	ENSG00000114735|ENST00000232854|HEMK1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.8480224609375	2	574.318251	1146.62195	-1.0377	-0.00059598	3.5373	0.0020315	2.4996	0.0014355	574.3202287299239	84.841	2.3433	84.908	83.686	86.03	0.067177					80	53	2	0	0	0	0.20789	1	8377	8377		21.96	0.25755	1	82615			33804	2786	22355	22365	38559	38559					0.05450351387912633
LQRMPVQYI	9	Unmodified	_LQRMPVQYI_					0	0	0		ENSG00000114735|ENST00000232854|HEMK1;ENST00000448997.5_1_3:50608680-50617422:+|nuORF	ENSG00000114735|ENST00000232854|HEMK1	ENSG00000114735|ENST00000232854|HEMK1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	574.318251	1146.62195	-0.59997	-0.00034458	2.9167	0.0016751	2.3168	0.0013306	574.3199214888101	84.653	3.6931	84.653	82.649	86.343	0	-0.033492	4.7479E-05	NaN	21.96	114	88	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56870			33805	2786	22355	22365							0.05450351387912633
LQRMPVQYI	9	Unmodified	_LQRMPVQYI_					0	0	0		ENSG00000114735|ENST00000232854|HEMK1;ENST00000448997.5_1_3:50608680-50617422:+|nuORF	ENSG00000114735|ENST00000232854|HEMK1	ENSG00000114735|ENST00000232854|HEMK1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	574.318251	1146.62195	-1.2475	-0.00071649	3.7738	0.0021674	2.5263	0.0014509	574.3203629833646	84.546	2.9868	84.695	82.851	85.838	0.14952	0.0090841	0.0010319	NaN	21.96	98	68	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62307			33806	2786	22355	22365							0.05450351387912633
LQRQGLALSPR	11	Unmodified	_LQRQGLALSPR_					0	0	0		ENST00000595069.5_2_10:75256229-75278577:+|nuORF	ENST00000595069.5_2_10:75256229-75278577:+|nuORF	ENST00000595069.5_2_10:75256229-75278577:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8695068359375	2	619.870028	1237.7255	1.6172	0.0010025	-2.8457	-0.001764	-1.2285	-0.00076151	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.70737	1	11073	11073		30.318	3.6248	1	1541100			33807	14326	22356	22366	38560	38560					0.11614974819917734
LQRRGFFLI	9	Unmodified	_LQRRGFFLI_					0	0	0		ENST00000337132.9_1_1:16785679-16785925:+|nuORF;ENST00000492095.5_1_1:16785414-16785925:+|nuORF	ENST00000337132.9_1_1:16785679-16785925:+|nuORF	ENST00000337132.9_1_1:16785679-16785925:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.3453369140625	2	575.3482	1148.68185	-1.3696	-0.00078799	-3.1953	-0.0018384	-4.5649	-0.0026264	575.3462227460456	98.573	2.415	98.769	98.2	100.61	0.19585					159	55	5	0	0	0	0.7932	1	10137	10137		25.45	2.4077	1	2256700			33808	10184	22357	22367	38561	38561					0.11345410113472099
LQRRGVPQRR	10	Unmodified	_LQRRGVPQRR_					0	0	0			REV__ENST00000536441.6_2_11:94926684-94964088:-|nuORF	REV__ENST00000536441.6_2_11:94926684-94964088:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5924987792969	3	422.593566	1264.75887	-0.79538	-0.00033612	-1.3166	-0.00055641	-2.112	-0.00089253	422.592922669687	49.251	2.9518	49.227	47.881	50.833	-0.024033					246	71	5	0	0	0	0.86621	1	4317	4317		26.063	5.0311	1	2205000	+		33809	28408	22358	22368	38562	38562					0.13708021382490188
LQRRRAGG	8	Unmodified	_LQRRRAGG_					0	0	0			REV__ENST00000426548.5_1_17:42908027-42908075:-|nuORF	REV__ENST00000426548.5_1_17:42908027-42908075:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26385498046875	2	457.275567	912.53658	-0.13169	-6.0217E-05	0.028111	1.2854E-05	-0.10358	-4.7362E-05	457.27563111170184	81.429	0.46954	81.493	81.142	81.612	0.064384					12	10	2	0	0	0	0.4196	1	8006	8006		26.796	12.132	1	34320	+		33810	26545	22359	22369	38563	38563					0.07681367037127984
LQRRRLYT	8	Unmodified	_LQRRRLYT_					0	0	0			REV__nc|ENSG00000105643|Q8TBH0-2|ARRDC2	REV__nc|ENSG00000105643|Q8TBH0-2|ARRDC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.33251953125	2	553.333082	1104.65161	0.28517	0.0001578	-1.4807	-0.00081935	-1.1956	-0.00066155	553.3321125200671	96.704	2.3133	96.935	96.395	98.708	0.23103					137	53	4	0	0	0	0.87922	1	9931	9931		31.955	6.5047	1	3367100	+		33811	29758	22360	22370	38564	38564					0.10347051448275124
LQRRRLYT	8	Unmodified	_LQRRRLYT_					0	0	0			REV__nc|ENSG00000105643|Q8TBH0-2|ARRDC2	REV__nc|ENSG00000105643|Q8TBH0-2|ARRDC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3331298828125	2	553.333082	1104.65161	1.115	0.00061697	-2.2699	-0.001256	-1.1549	-0.00063904	553.3316729497465	96.557	1.6944	96.962	96.464	98.158	0.40498					120	40	4	0	0	0	0.87479	2	11578	11578;11629		35.201	4.9296	1	3081200	+		33812	29758	22360	22370	38565;38566	38565					0.10347051448275124
LQRRRLYT	8	Unmodified	_LQRRRLYT_					0	0	0			REV__nc|ENSG00000105643|Q8TBH0-2|ARRDC2	REV__nc|ENSG00000105643|Q8TBH0-2|ARRDC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.33251953125	2	553.333082	1104.65161	0.80706	0.00044658	-1.9527	-0.0010805	-1.1457	-0.00063393	553.3318451739801	96.663	1.8533	97.067	96.582	98.436	0.40451					128	44	4	0	0	0	0.87922	1	11623	11623		31.955	0.42505	1	3116400	+		33813	29758	22360	22370	38567	38567					0.10347051448275124
LQRRRRRRRK	10	Unmodified	_LQRRRRRRRK_					0	0	0		ENST00000607809.5_1_12:54472874-54474119:-|nuORF	ENST00000607809.5_1_12:54472874-54474119:-|nuORF	ENST00000607809.5_1_12:54472874-54474119:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3246765136719	3	494.325925	1479.95595	0.075913	3.7526E-05	3.41	0.0016857	3.4859	0.0017232	494.3275244679942	15.426	0.35091	15.484	15.35	15.7	0.057872					29	11	4	0	0	0	0.91151	1	25	25		7.3997	1.9868	1	424000			33814	14469	22361	22371	38568	38568					0.2351666571591977
LQRSLIPQF	9	Unmodified	_LQRSLIPQF_					0	0	0			REV__ENST00000311117.7_1_7:104752665-104752818:+|nuORF	REV__ENST00000311117.7_1_7:104752665-104752818:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.32080078125	2	551.324391	1100.63423	-0.22243	-0.00012263	-2.8715	-0.0015831	-3.0939	-0.0017057	551.323001796936	34.472	0.64371	34.477	34.152	34.796	0.0046539					25	14	3	0	0	0	0.73802	1	2093	2093		37.812	4.9991	1	69470	+		33815	24901	22362	22372	38569	38569					0.08793711122598324
LQRSPPGT	8	Unmodified	_LQRSPPGT_					0	0	0			REV__ENST00000542274.5_1_16:68679206-68732300:+|nuORF	REV__ENST00000542274.5_1_16:68679206-68732300:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.26153564453125	2	428.237784	854.461016	-1.6674	-0.00071406	-0.079224	-3.3927E-05	-1.7467	-0.00074798	428.23754587616935	90.512	0.35534	90.73	90.51	90.865	0.21736					13	8	2	0	0	0	0.4196	1	9076	9076		44.117	0	1	277830	+		33816	28495	22363	22373	38570	38570					0.027963450661786737
LQRSQPPLLTL	11	Unmodified	_LQRSQPPLLTL_					0	0	0		nc|ENSG00000118094|O43280-2|TREH;ENSG00000118094|ENST00000264029|TREH	nc|ENSG00000118094|O43280-2|TREH	nc|ENSG00000118094|O43280-2|TREH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5939636230469	3	422.590717	1264.75032	0.30451	0.00012868	4.046	0.0017098	4.3505	0.0018385	422.59238731666846	53.239	1.2809	53.31	52.523	53.804	0.070713					81	35	3	0	0	0	0.75121	2	4347	4339;4347		21.78	2.9942	1	160480			33817	3010	22364	22374	38571;38572	38572					0.12853609902640528
LQRSQPPLLTL	11	Unmodified	_LQRSQPPLLTL_					0	0	0		nc|ENSG00000118094|O43280-2|TREH;ENSG00000118094|ENST00000264029|TREH	nc|ENSG00000118094|O43280-2|TREH	nc|ENSG00000118094|O43280-2|TREH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5929260253906	3	422.590717	1264.75032	0.33778	0.00014274	3.9713	0.0016782	4.309	0.001821	422.5923327549996	56.605	1.259	56.704	56.541	57.8	0.099186					96	58	2	0	0	0	0.67568	1	4803	4803		35.496	4.9268	1	698260			33818	3010	22364	22374	38573	38573					0.12853609902640528
LQRVQRRLER	10	Unmodified	_LQRVQRRLER_					0	0	0			REV__nc|ENSG00000095066|Q96ED9-2|HOOK2	REV__nc|ENSG00000095066|Q96ED9-2|HOOK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.27886962890625	3	451.944376	1352.8113	-0.67633	-0.00030566	-1.9317	-0.00087303	-2.6081	-0.0011787	451.94335598806316	53.501	2.9355	53.476	51.367	54.303	-0.024754					205	72	4	0	0	0	0.84763	1	4888	4888		17.833	4.3252	1	765750	+		33819	17052	22365	22375	38574	38574					0.14900559725447238
LQSGERTWCW	10	Unmodified	_LQSGERTWCW_					0	0	0		ENST00000374979.7_2_11:124644802-124670283:-|nuORF	ENST00000374979.7_2_11:124644802-124670283:-|nuORF	ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.52996826171875	3	422.52924	1264.56589	-0.4052	-0.00017121	3.8156	0.0016122	3.4104	0.001441	422.53085422271215	18.196	0.22849	18.12	17.998	18.227	-0.07671					11	7	2	0	0	0	0.86348	1	285	285		29.551	0.97402	1	27767			33820	10789	22366	22376	38575	38575					-0.05580901519533654
LQSIDPLPIN	10	Unmodified	_LQSIDPLPIN_					0	0	0			REV__ENST00000478345.1_1_6:117862091-117866721:+|nuORF	REV__ENST00000478345.1_1_6:117862091-117866721:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.3138427734375	2	555.313689	1108.61282	-0.67024	-0.00037219	-3.4435	-0.0019122	-4.1137	-0.0022844	555.312337360713	60.004	1.246	60.557	60.079	61.325	0.55323					38	33	2	0	0	0	0.60985	1	6347	6347		49.536	0	1	819920	+		33821	27379	22367	22377	38576	38576					0.06286281303255237
LQSIKLLSSTK	11	Unmodified	_LQSIKLLSSTK_					0	0	0		nc|ENSG00000107938|Q3B7T1-5|EDRF1;ENSG00000107938|ENST00000356792|EDRF1;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;ENST00000419769.6_1_10:127430814-127452038:+|nuORF	nc|ENSG00000107938|Q3B7T1-5|EDRF1	nc|ENSG00000107938|Q3B7T1-5|EDRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.58746337890625	3	406.586972	1216.73909	-0.37107	-0.00015087	2.0707	0.00084191	1.6996	0.00069104	406.58772324462274	24.588	2.4069	24.542	24.117	26.524	-0.04598					132	57	4	0	0	0	0.69687	1	986	986		32.034	2.8641	1	381610			33822	2381	22368	22378	38577	38577					0.1393878780850173
LQSLGPKTQ	9	Unmodified	_LQSLGPKTQ_					0	0	0		ENSG00000198087|ENST00000359314|CD2AP	ENSG00000198087|ENST00000359314|CD2AP	ENSG00000198087|ENST00000359314|CD2AP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.27801513671875	2	486.279649	970.544745	0.81197	0.00039484	-0.57019	-0.00027727	0.24178	0.00011757	486.2791649156091	33.065	0.54701	33.277	32.977	33.524	0.21168					29	12	3	0	0	0	0.48102	1	2381	2381		52.937	1.744	1	464760			33823	8235	22369	22379	38578	38578					0.05829456443234449
LQSLLLFSR	9	Unmodified	_LQSLLLFSR_					0	0	0		ENSG00000134815|ENST00000328771|DHX34;ENST00000486327.6_1_19:47880370-47884327:+|nuORF	ENSG00000134815|ENST00000328771|DHX34	ENSG00000134815|ENST00000328771|DHX34	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3267822265625	2	538.826766	1075.63898	-0.1639	-8.8311E-05	3.9701	0.0021392	3.8062	0.0020509	538.8289587745912	106.49	0.82303	106.47	106.18	107	-0.025146					34	18	2	0	0	0	0.20789	1	11617	11617		14.137	0	1	339750			33824	3960	22370	22380	38579	38579					0.1041859526535518
LQSLPFALTH	10	Unmodified	_LQSLPFALTH_					0	0	0		nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB;ENSG00000180900|ENST00000356994|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.8162841796875	2	563.816399	1125.61824	0.4108	0.00023161	0.86681	0.00048872	1.2776	0.00072034	563.8167084474933	53.74	1.0262	53.763	53.411	54.438	0.022541					39	28	2	0	0	0	0.86218	1	4754	4754		32.812	4.9302	1	133250			33825	7356	22371	22381	38580	38580					0.060460048857066795
LQSLVRPAGA	10	Unmodified	_LQSLVRPAGA_					0	0	0		ENST00000488952.1_1_2:96809981-96810071:-|nuORF	ENST00000488952.1_1_2:96809981-96810071:-|nuORF	ENST00000488952.1_1_2:96809981-96810071:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3008117675781	2	506.300916	1010.58728	0.76933	0.00038951	-0.62293	-0.00031539	0.1464	7.4122E-05	506.30057654183594	96.316	1.2031	96.479	95.934	97.138	0.16317					64	27	3	0	0	0	0.85981	1	9952	9952		35.152	1.659	1	470040			33826	12642	22372	22382	38581	38581					0.08240851571463281
LQSLWRPL	8	Unmodified	_LQSLWRPL_					0	0	0		chr17:16119485-16126082|17|14.06|0.11|7.02|-|0|NCOR1,NCOR1|2;chr17:16119485-16119758|38|10.42|0.16|6.04|-|0|NCOR1,None|1	chr17:16119485-16126082|17|14.06|0.11|7.02|-|0|NCOR1,NCOR1|2	chr17:16119485-16126082|17|14.06|0.11|7.02|-|0|NCOR1,NCOR1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.80133056640625	2	506.800552	1011.58655	-0.74642	-0.00037829	1.5683	0.00079484	0.82192	0.00041655	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.87479	1	3788	3788		30.504	2.6214	1	258120			33827	214	22373	22383	38582	38582					0.08122056922411502
LQSPCMLARPV	11	Unmodified	_LQSPCMLARPV_					0	0	0			REV__ENST00000495183.5_1_6:29910749-29913287:+|nuORF	REV__ENST00000495183.5_1_6:29910749-29913287:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	607.82421875	2	607.822844	1213.63113	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.649	1	58.619	58.119	59.119	-0.030888								0	0	0	0.56276	1	5462	5462		40.058	1.252	1		+		33828	27731	22374	22384	38583	38583					0.032863766819218654
LQSPSLHF	8	Unmodified	_LQSPSLHF_					0	0	0		ENST00000367537.7_2_1:183522179-183522356:+|nuORF	ENST00000367537.7_2_1:183522179-183522356:+|nuORF	ENST00000367537.7_2_1:183522179-183522356:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.2467346191406	2	464.747985	927.481417	-1.0856	-0.00050451	-2.9061	-0.0013506	-3.9917	-0.0018551	464.74663861443	65.1	0.27235	65.226	65.082	65.354	0.12545					19	11	2	0	0	0	0.88915	1	5758	5758		35.201	4.6971	1	112410			33829	10553	22375	22385	38584	38584					0.014775157260032756
LQSPSLHF	8	Unmodified	_LQSPSLHF_					0	0	0		ENST00000367537.7_2_1:183522179-183522356:+|nuORF	ENST00000367537.7_2_1:183522179-183522356:+|nuORF	ENST00000367537.7_2_1:183522179-183522356:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	464.747985	927.481417	-1.085	-0.00050426	-3.1159	-0.0014481	-4.2009	-0.0019524	464.7465813120789	65.245	0.31247	65.272	65.107	65.419	0.027138	0.02323	-7.4998E-05	NaN	35.201	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92026			33830	10553	22375	22385							0.014775157260032756
LQSQAGLP	8	Unmodified	_LQSQAGLP_					0	0	0		ENST00000583444.1_1_17:80187265-80187778:+|nuORF	ENST00000583444.1_1_17:80187265-80187778:+|nuORF	ENST00000583444.1_1_17:80187265-80187778:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2574768066406	2	407.226885	812.439217	1.0396	0.00042335	-2.2548	-0.00091822	-1.2152	-0.00049486	407.22588215965357	40.143	0.58984	40.152	39.773	40.363	0.0092812					19	13	2	0	0	0	0.4196	1	2820	2820		24.203	17.467	1	54173			33831	14121	22376	22386	38585	38585					0.025495403176250875
LQSQCTCLLIQ	11	Unmodified	_LQSQCTCLLIQ_					0	0	0		ENST00000418309.1_1_7:156396604-156398412:-|nuORF;ENST00000440711.1_1_7:156397865-156398412:-|nuORF;ENST00000447933.5_1_7:156265368-156398412:-|nuORF	ENST00000418309.1_1_7:156396604-156398412:-|nuORF	ENST00000418309.1_1_7:156396604-156398412:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	625.3201904296875	2	625.317591	1248.62063	1.2904	0.0008069	2.6088	0.0016313	3.8991	0.0024382	625.3191697784131	64.348	0.83466	64.468	64.114	64.949	0.12005					63	28	3	0	0	0	0.31977	1	5657	5657		70.816	4.3869	1	439280			33832	11420	22377	22387	38586	38586					0.006263492368589141
LQSRILKRVP	10	Unmodified	_LQSRILKRVP_					0	0	0		ENST00000481734.1_1_3:39174545-39175936:+|nuORF;nc|ENSG00000168026|Q8NDW8-6|TTC21A;nc|ENSG00000168026|Q8NDW8-5|TTC21A;ENSG00000168026|ENST00000683103|TTC21A;nc|ENSG00000168026|Q8NDW8|TTC21A;nc|ENSG00000168026|Q8NDW8-7|TTC21A	ENST00000481734.1_1_3:39174545-39175936:+|nuORF	ENST00000481734.1_1_3:39174545-39175936:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.93011474609375	3	403.931185	1208.77173	-1.8895	-0.00076324	-2.2243	-0.00089846	-4.1138	-0.0016617	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.86551	1	3615	3615		14.694	1.2396	1	2300300			33833	12466	22378	22388	38587	38587					0.17569039722025082
LQSSNVIRETP	11	Unmodified	_LQSSNVIRETP_					0	0	0			REV__ENSG00000186532|ENST00000305513|SMYD4	REV__ENSG00000186532|ENST00000305513|SMYD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3366088867188	2	622.335684	1242.65681	2.9643	0.0018448	-1.825	-0.0011358	1.1393	0.00070904	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.72374	1	12331	12331		12.812	0	1	435720	+		33834	22861	22379	22389	38588	38588					0.04519265729572908
LQSTTHARRRG	11	Unmodified	_LQSTTHARRRG_					0	0	0			REV__ENST00000609111.1_1_10:88727834-88728308:-|nuORF	REV__ENST00000609111.1_1_10:88727834-88728308:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3651733398438	2	641.857983	1281.70141	-0.048782	-3.1311E-05	1.8272	0.0011728	1.7784	0.0011415	642.3608077145252	117.28	0.25537	117.21	117	117.26	-0.07531					22	8	4	0	0	0	0.17226	1	12572	12572		42.864	0	1	1765100	+		33835	29405	22380	22390	38589	38589					0.07183134386241363
LQSTTHARRRG	11	Unmodified	_LQSTTHARRRG_					0	0	0			REV__ENST00000609111.1_1_10:88727834-88728308:-|nuORF	REV__ENST00000609111.1_1_10:88727834-88728308:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.36279296875	2	641.857983	1281.70141	1.7061	0.001095	0.85773	0.00055054	2.5638	0.0016456	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.57736	6	12966	12538;12622;12708;12928;12966;13033		46.457	12.535	1	27133000	+		33836	29405	22380	22390	38590;38591;38592;38593;38594;38595	38594					0.07183134386241363
LQSTTHARRRG	11	Unmodified	_LQSTTHARRRG_					0	0	0			REV__ENST00000609111.1_1_10:88727834-88728308:-|nuORF	REV__ENST00000609111.1_1_10:88727834-88728308:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.861328125	2	641.857983	1281.70141	0.94116	0.00060409	0.48356	0.00031037	1.4247	0.00091446	642.3596969361647	118.8	0.19493	118.86	118.79	118.98	0.060577					15	7	3	0	0	0	0.76251	1	12495	12495		19.263	1.0006	1	181430	+		33837	29405	22380	22390	38596	38596					0.07183134386241363
LQSVQAAGHL	10	Unmodified	_LQSVQAAGHL_					0	0	0		ENST00000356098.9_1_22:51065112-51065154:-|nuORF	ENST00000356098.9_1_22:51065112-51065154:-|nuORF	ENST00000356098.9_1_22:51065112-51065154:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.28173828125	2	512.282723	1022.55089	-0.88857	-0.0004552	-1.7897	-0.00091686	-2.6783	-0.0013721	512.2817341917631	86.454	3.0125	86.454	85.618	88.63	0					129	69	2	0	0	0	0.8608	1	8279	8279		34.173	0	1	265310			33838	10358	22381	22391	38597	38597					0.0405197467475773
LQSVQKVIISD	11	Unmodified	_LQSVQKVIISD_					0	0	0		nc|ENSG00000131044|Q3SXZ7-2|TTLL9;ENSG00000131044|ENST00000535842|TTLL9	nc|ENSG00000131044|Q3SXZ7-2|TTLL9	nc|ENSG00000131044|Q3SXZ7-2|TTLL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.3572998046875	2	615.358628	1228.7027	-0.35839	-0.00022054	-1.6201	-0.00099692	-1.9785	-0.0012175	615.3576084899992	104.75	2.3818	104.73	104.28	106.66	-0.014809					147	56	4	0	0	0	0.7144	1	11334	11334		29.17	1.0886	1	1933000			33839	14912	22382	22392	38598	38598					0.09749910911796178
LQSVQKVIISD	11	Unmodified	_LQSVQKVIISD_					0	0	0		nc|ENSG00000131044|Q3SXZ7-2|TTLL9;ENSG00000131044|ENST00000535842|TTLL9	nc|ENSG00000131044|Q3SXZ7-2|TTLL9	nc|ENSG00000131044|Q3SXZ7-2|TTLL9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.359130859375	2	615.358628	1228.7027	1.2106	0.00074497	-2.9695	-0.0018273	-1.7589	-0.0010824	615.3568978915573	104.33	3.2029	104.5	103.73	106.93	0.17096					209	79	4	0	0	0	0.69931	1	11145	11145		31.634	1.3165	1	3137500			33840	14912	22382	22392	38599	38599					0.09749910911796178
LQTCQKYRKKY	11	Carbamidomethyl (C)	_LQTC(Carbamidomethyl (C))QKYRKKY_	LQTC(1)QKYRKKY		LQTC(41)QKYRKKY		0	1	0		nc|ENSG00000155158|Q5VTQ0-5|TTC39B;nc|ENSG00000155158|Q5VTQ0-2|TTC39B;nc|ENSG00000155158|Q5VTQ0-6|TTC39B;ENSG00000155158|ENST00000512701|TTC39B;nc|ENSG00000155158|Q5VTQ0-3|TTC39B;nc|ENSG00000155158|Q5VTQ0|TTC39B;ENST00000505732.5_1_9:15186859-15307321:-|nuORF	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.93988037109375	3	505.941532	1514.80277	-0.92219	-0.00046657	-2.3499	-0.0011889	-3.2721	-0.0016555	505.9402761818825	62.204	1.4325	62.592	62.229	63.662	0.38845					93	32	5	0	0	0	0.62914	1	6651	6651		41.08	22.549	1	1337800			33841	5314	22383	22393	38600	38600	67				0.06595824973919662
LQTCQKYRKKY	11	Carbamidomethyl (C)	_LQTC(Carbamidomethyl (C))QKYRKKY_	LQTC(1)QKYRKKY		LQTC(44)QKYRKKY		0	1	0		nc|ENSG00000155158|Q5VTQ0-5|TTC39B;nc|ENSG00000155158|Q5VTQ0-2|TTC39B;nc|ENSG00000155158|Q5VTQ0-6|TTC39B;ENSG00000155158|ENST00000512701|TTC39B;nc|ENSG00000155158|Q5VTQ0-3|TTC39B;nc|ENSG00000155158|Q5VTQ0|TTC39B;ENST00000505732.5_1_9:15186859-15307321:-|nuORF	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.9399108886719	3	505.941532	1514.80277	0.70233	0.00035534	-3.9202	-0.0019834	-3.2179	-0.0016281	505.9395195781461	62.078	1.1683	62.633	62.257	63.425	0.55449					88	26	5	0	0	0	0.60687	1	6651	6651		43.651	10.9	1	1470300			33842	5314	22383	22393	38601	38601	67				0.06595824973919662
LQTKEIVQKL	10	Unmodified	_LQTKEIVQKL_					0	0	0		ENSG00000196981|ENST00000330689|WDR5B;ENSG00000196363|ENST00000358625|WDR5	ENSG00000196981|ENST00000330689|WDR5B	ENSG00000196981|ENST00000330689|WDR5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.5840759277344	3	400.583451	1198.72852	0.57912	0.00023199	0.86778	0.00034762	1.4469	0.0005796	400.5838627795449	24.287	0.98159	24.343	23.961	24.942	0.055487					52	24	3	0	0	0	0.86698	1	865	865		28.081	0	1	65016			33843	8043	22384	22394	38602	38602					0.13710805154096306
LQTLRLQRLA	10	Unmodified	_LQTLRLQRLA_					0	0	0			REV__nc|ENSG00000065361|P21860-4|ERBB3	REV__nc|ENSG00000065361|P21860-4|ERBB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.589111328125	3	404.59094	1210.75099	0.081752	3.3076E-05	-4.4169	-0.001787	-4.3351	-0.0017539	404.58905474066694	39.518	1.496	39.488	38.762	40.258	-0.03027					92	35	3	0	0	0	0.85259	2	2750	2727;2750		26.063	4.1098	1	403230	+		33844	16497	22385	22395	38603;38604	38604					0.15404449342349835
LQTLRLQRLA	10	Unmodified	_LQTLRLQRLA_					0	0	0			REV__nc|ENSG00000065361|P21860-4|ERBB3	REV__nc|ENSG00000065361|P21860-4|ERBB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.58905029296875	3	404.59094	1210.75099	-1.3096	-0.00052987	-2.8286	-0.0011444	-4.1383	-0.0016743	404.5896495246431	39.318	1.9056	39.271	38.511	40.416	-0.047005					116	44	4	0	0	0	0.85441	2	2812	2788;2812		26.063	4.283	1	380940	+		33845	16497	22385	22395	38605;38606	38606					0.15404449342349835
LQTLRLQRLA	10	Unmodified	_LQTLRLQRLA_					0	0	0			REV__nc|ENSG00000065361|P21860-4|ERBB3	REV__nc|ENSG00000065361|P21860-4|ERBB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.92242431640625	3	404.59094	1210.75099	-1.2934	-0.00052329	-3.8685	-0.0015652	-5.1619	-0.0020885	404.5892229323439	41.136	1.2646	41.095	40.508	41.772	-0.04081					80	34	3	0	0	0	0.85441	1	3044	3044		20.837	0.80668	1	339150	+		33846	16497	22385	22395	38607	38607					0.15404449342349835
LQTPSRHC	8	Carbamidomethyl (C)	_LQTPSRHC(Carbamidomethyl (C))_	LQTPSRHC(1)		LQTPSRHC(66)		0	1	0			REV__ENST00000341511.10_1_9:139901726-139901834:-|nuORF	REV__ENST00000341511.10_1_9:139901726-139901834:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7464294433594	2	499.74545	997.476348	-0.15932	-7.962E-05	2.7427	0.0013706	2.5834	0.001291	499.7467849148571	68.687	1.0007	69.234	68.908	69.908	0.54694					45	20	3	0	0	0	0.73851	1	7587	7587		65.803	10.299	1	648730	+		33847	25262	22386	22396	38608	38608	309				-0.022491114082640706
LQTPYHETVY	10	Unmodified	_LQTPYHETVY_					0	0	0		ENSG00000100744|ENST00000555181|GSKIP	ENSG00000100744|ENST00000555181|GSKIP	ENSG00000100744|ENST00000555181|GSKIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	625.8068237304688	2	625.806228	1249.5979	-0.20088	-0.00012571	0.88651	0.00055478	0.68563	0.00042907	625.8067206990463	74.37	1.1963	74.761	74.416	75.612	0.39111					67	28	4	0	0	0	0.51302	1	8374	8374		54.776	1.8396	1	2980400			33848	1866	22387	22397	38609	38609					-0.016912105647634235
LQTSKDIYTQ	10	Unmodified	_LQTSKDIYTQ_					0	0	0			REV__ENSG00000119965|ENST00000481909|C10orf88	REV__ENSG00000119965|ENST00000481909|C10orf88	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	598.8033447265625	2	598.81151	1195.60847	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.81	1	113.91	113.41	114.41	0.10217								0	0	0	0.45132	1	12200	12200		19.997	1.6724	1		+		33849	18391	22388	22398	38610	38610					0.01848772089670092
LQVDPKKR	8	Unmodified	_LQVDPKKR_					0	0	0		nc|ENSG00000165304|Q14680-3|MELK;nc|ENSG00000165304|Q14680-4|MELK;chr9:36589652-36597222|57|16.68|0.38|5.45|+|ENST00000536987|MELK,MELK;nc|ENSG00000165304|Q14680-5|MELK;nc|ENSG00000165304|Q14680-2|MELK;nc|ENSG00000165304|Q14680-8|MELK;nc|ENSG00000165304|Q14680-7|MELK;nc|ENSG00000165304|Q14680-6|MELK;ENSG00000165304|ENST00000298048|MELK	nc|ENSG00000165304|Q14680-3|MELK	nc|ENSG00000165304|Q14680-3|MELK	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.2992248535156	2	492.303458	982.592364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.032	1	59.032	58.532	59.532	0								0	0	0	0.29344	1	5129	5129		31.955	1.4512	1				33850	531	22389	22399	38611	38611					0.10037155434076794
LQVIKILGTEK	11	Unmodified	_LQVIKILGTEK_					0	0	0		ENSG00000266967|ENST00000427569|AARSD1;nc|ENSG00000266967|Q9BTE6-2|AARSD1;nc|ENSG00000266967|Q9BTE6-3|AARSD1;ENST00000486664.5_1_17:41107347-41108531:-|nuORF	ENSG00000266967|ENST00000427569|AARSD1	ENSG00000266967|ENST00000427569|AARSD1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3938598632812	2	621.395013	1240.77547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.337	1	20.412	19.912	20.912	0.075848								0	0	0	0.56276	1	496	496		25.126	1.6033	1				33851	8954	22390	22400	38612	38612					0.1647166470522734
LQVLDKQNEL	10	Unmodified	_LQVLDKQNEL_					0	0	0			REV__ENST00000487519.5_1_10:60150537-60150582:+|nuORF	REV__ENST00000487519.5_1_10:60150537-60150582:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	600.3330688476562	2	600.335153	1198.65575	0.97496	0.0005853	-3.1335	-0.0018811	-2.1585	-0.0012958	600.3333001736194	93.972	2.6072	94.2	93.361	95.968	0.22863					134	62	3	0	0	0	0.86698	1	9565	9565		28.081	0.19925	1	602950	+		33852	27577	22391	22401	38613	38613					0.0643705136067183
LQVLGLLDLLL	11	Unmodified	_LQVLGLLDLLL_					0	0	0			REV__ENSG00000206077|ENST00000508859|ZDHHC11B	REV__ENSG00000206077|ENST00000508859|ZDHHC11B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.92950439453125	3	403.93208	1208.77441	-1.8895	-0.00076324	-4.4403	-0.0017936	-6.3298	-0.0025568	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.77205	1	3670	3670		17.167	1.8293	1	2300300	+		33853	23585	22392	22402	38614	38614					0.1783745033633295
LQVLLVLE	8	Unmodified	_LQVLLVLE_					0	0	0		ENST00000526210.1_1_11:62402291-62407104:-|nuORF	ENST00000526210.1_1_11:62402291-62407104:-|nuORF	ENST00000526210.1_1_11:62402291-62407104:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.79998779296875	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.82419	1	3395	3395		13.775	0	1	1294000			33854	13256	22393	22403	38615	38615					0.119050031137931
LQVLPLVPG	9	Unmodified	_LQVLPLVPG_					0	0	0		ENST00000337827.8_1_14:69808433-69813789:+|nuORF	ENST00000337827.8_1_14:69808433-69813789:+|nuORF	ENST00000337827.8_1_14:69808433-69813789:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2997741699219	2	468.299853	934.585153	-2.226	-0.0010424	1.9484	0.00091246	-0.27757	-0.00012998	468.30061024502805	38.371	0.76891	38.382	38.08	38.849	0.011173					39	17	3	0	0	0	0.76996	1	2638	2638		33.516	3.0119	1	159490			33855	10193	22394	22404	38616	38616					0.11524422833656445
LQVLPRTW	8	Unmodified	_LQVLPRTW_					0	0	0			REV__ENST00000358220.5_1_10:1176693-1176822:+|nuORF	REV__ENST00000358220.5_1_10:1176693-1176822:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.79901123046875	2	506.800552	1011.58655	-0.45827	-0.00023225	1.7811	0.00090266	1.3228	0.00067041	506.80143278621483	53.641	1.4346	53.616	53.128	54.562	-0.024754					61	37	2	0	0	0	0.85277	1	4847	4847		25.45	1.2474	1	166920	+		33856	25429	22395	22405	38617	38617					0.08122056922411502
LQVPALVV	8	Unmodified	_LQVPALVV_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.77532958984375	2	419.773471	837.53239	-0.10078	-4.2304E-05	4.0424	0.0016969	3.9416	0.0016546	419.7750685002772	52.128	2.0035	52.125	51.055	53.058	-0.0020447					75	49	2	0	0	0	0.82464	1	4488	4488		21.702	0	1	171040	+		33857	23196	22396	22406	38618	38618					0.10712464770847419
LQVPDSTLLHK	11	Unmodified	_LQVPDSTLLHK_					0	0	0			REV__nc|ENSG00000163138|Q8N7B6-4|PACRGL	REV__nc|ENSG00000163138|Q8N7B6-4|PACRGL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.5758972167969	3	417.574955	1249.70304	1.3349	0.00055741	0.026149	1.0919E-05	1.361	0.00056833	417.5749239051732	21.566	1.4264	21.123	20.825	22.251	-0.44324					86	32	4	0	0	0	0.59499	1	823	823		33.542	3.4024	1	1107100	+		33858	29981	22397	22407	38619	38619					0.0881733063165484
LQVPERNKP	9	Unmodified	_LQVPERNKP_					0	0	0			REV__ENST00000402743.2_1_1:44587827-44588175:-|nuORF	REV__ENST00000402743.2_1_1:44587827-44588175:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.81396484375	2	540.811648	1079.60874	0.11952	6.4638E-05	4.0799	0.0022065	4.1995	0.0022711	540.813674930169	34.68	1.5274	34.89	34.065	35.593	0.21002					91	37	3	0	0	0	0.17181	1	2565	2565		79.713	2.395	1	1016600	+		33859	26266	22398	22408	38620	38620					0.07212236600184951
LQVPFCAIHLK	11	Unmodified	_LQVPFCAIHLK_					0	0	0			REV__nc|ENSG00000182504|Q8IW35-2|CEP97	REV__nc|ENSG00000182504|Q8IW35-2|CEP97	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3284301757812	2	634.862826	1267.7111	1.6077	0.0010207	-2.6647	-0.0016918	-1.057	-0.00067108	634.8600206470512	57.624	0.15285	58.179	58.116	58.269	0.55512					5	3	2	0	0	0	0.1728	1	6032	6032		24.519	3.5723	1	235090	+		33860	22528	22399	22409	38621	38621					0.08795186347424533
LQVPIRVDKIE	11	Unmodified	_LQVPIRVDKIE_					0	0	0			REV__nc|ENSG00000133115|Q8TAV4-2|STOML3	REV__nc|ENSG00000133115|Q8TAV4-2|STOML3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26788330078125	3	437.266122	1308.77654	1.1681	0.00051075	2.8066	0.0012272	3.9747	0.001738	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.70847	1	4508	4508		30.139	12.972	1	4130900	+		33861	19059	22400	22410	38622	38622					0.13449879074119053
LQVRAQCGLAR	11	Unmodified	_LQVRAQCGLAR_					0	0	0		ENST00000260402.7_1_15:40588574-40589003:-|nuORF	ENST00000260402.7_1_15:40588574-40589003:-|nuORF	ENST00000260402.7_1_15:40588574-40589003:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5654296875	3	405.564396	1213.67136	-0.18903	-7.6663E-05	1.0775	0.000437	0.88849	0.00036034	405.56470246140424	60.148	1.7799	60.134	59.159	60.939	-0.013729					123	48	3	0	0	0	0.67778	1	5576	5576		37.6	3.6783	1	242840			33862	9386	22401	22411	38623	38623					0.07307059396703153
LQVSQGKL	8	Unmodified	_LQVSQGKL_					0	0	0		ENSG00000115365|ENST00000450366|LANCL1	ENSG00000115365|ENST00000450366|LANCL1	ENSG00000115365|ENST00000450366|LANCL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7630920410156	2	436.763635	871.512717	1.7626	0.00076985	-0.96852	-0.00042301	0.79409	0.00034683	436.7629205376576	26.512	1.1482	26.479	25.815	26.963	-0.032125					62	27	3	0	0	0	0.72312	1	1131	1131		66.429	0	1	159520			33863	2838	22402	22412	38624	38624					0.071820887600893
LQVVHRAF	8	Unmodified	_LQVVHRAF_					0	0	0		ENSG00000145860|ENST00000424310|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145	ENSG00000145860|ENST00000424310|RNF145	ENSG00000145860|ENST00000424310|RNF145	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.2872619628906	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.335	1	76.383	75.883	76.883	0.047981								0	0	0	0.29694	1	7458	7458		37.028	1.4102	1				33864	4798	22403	22413	38625	38625					0.07004903608174118
LQWHSGAALK	10	Unmodified	_LQWHSGAALK_					0	0	0		ENST00000425170.1_1_6:86387849-86387939:-|nuORF	ENST00000425170.1_1_6:86387849-86387939:-|nuORF	ENST00000425170.1_1_6:86387849-86387939:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.805908203125	2	555.806365	1109.59818	-0.89307	-0.00049637	0.60808	0.00033797	-0.28499	-0.0001584	555.806604901083	59.553	0.91605	59.54	59.196	60.112	-0.013729					63	24	4	0	0	0	0.4892	1	5466	5466		56.721	0	1	365910			33865	11529	22404	22414	38626	38626					0.047762539457380626
LQWHSGAALK	10	Unmodified	_LQWHSGAALK_					0	0	0		ENST00000425170.1_1_6:86387849-86387939:-|nuORF	ENST00000425170.1_1_6:86387849-86387939:-|nuORF	ENST00000425170.1_1_6:86387849-86387939:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	556.3085327148438	2	555.806365	1109.59818	0.2531	0.00014067	-0.24733	-0.00013747	0.0057707	3.2074E-06	555.8062035865635	59.386	0.70735	59.48	59.191	59.898	0.094059					50	20	3	0	0	0	0.73395	1	5069	5069		42.864	2.0861	1	269860			33866	11529	22404	22414	38627	38627					0.047762539457380626
LQWLQLRRLQ	10	Unmodified	_LQWLQLRRLQ_					0	0	0		chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9438171386719	3	451.941973	1352.80409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.767	1	54.767	54.267	55.267	0								0	0	0	0.45132	1	4614	4614		40.058	1.3046	1				33867	272	22405	22415	38628	38628					0.14179827125030897
LQWLQLRRLQ	10	Unmodified	_LQWLQLRRLQ_					0	0	0		chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9428405761719	3	451.941973	1352.80409	-0.67633	-0.00030566	3.3865	0.0015305	2.7102	0.0012249	451.94335598806316	53.501	2.9355	53.476	51.367	54.303	-0.024754					205	72	4	0	0	0	0.86409	1	4720	4720		25.126	0.89417	1	765750			33868	272	22405	22415	38629	38629					0.14179827125030897
LQWLQLRRLQ	10	Unmodified	_LQWLQLRRLQ_					0	0	0		chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.94317626953125	3	451.941973	1352.80409	0.2172	9.8162E-05	2.4446	0.0011048	2.6618	0.001203	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.86551	1	4677	4677		14.694	0.60766	1	771970			33869	272	22405	22415	38630	38630					0.14179827125030897
LQWLQLRRLQ	10	Unmodified	_LQWLQLRRLQ_					0	0	0		chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9432067871094	3	451.941973	1352.80409	-0.61036	-0.00027585	3.6213	0.0016366	3.0109	0.0013608	451.94349825987973	55.257	1.4276	55.22	54.668	56.095	-0.036823					123	46	4	0	0	0	0.85259	1	4667	4667		20.03	2.8637	1	459960			33870	272	22405	22415	38631	38631					0.14179827125030897
LQYFKITLY	9	Unmodified	_LQYFKITLY_					0	0	0		ENST00000369902.7_1_10:104391017-104391560:+|nuORF	ENST00000369902.7_1_10:104391017-104391560:+|nuORF	ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	594.32568359375	2	594.8368	1187.65905	-0.65734	-0.00039101	2.7194	0.0016176	2.062	0.0012266	594.8383365501719	69.671	0.49407	69.737	69.521	70.015	0.065514					41	26	2	0	0	0	0.20789	1	6300	6300		31.955	0	1	828450			33871	10629	22406	22416	38632	38632					0.07272346205331814
LQYFKITLY	9	Unmodified	_LQYFKITLY_					0	0	0		ENST00000369902.7_1_10:104391017-104391560:+|nuORF	ENST00000369902.7_1_10:104391017-104391560:+|nuORF	ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	594.8368	1187.65905	-0.7039	-0.00041871	2.4465	0.0014553	1.7426	0.0010366	594.8381768573372	69.884	0.29899	69.884	69.665	69.964	0	0.16898	-0.00016333	NaN	31.955	20	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197960			33872	10629	22406	22416							0.07272346205331814
LQYFKITLY	9	Unmodified	_LQYFKITLY_					0	0	0		ENST00000369902.7_1_10:104391017-104391560:+|nuORF	ENST00000369902.7_1_10:104391017-104391560:+|nuORF	ENST00000369902.7_1_10:104391017-104391560:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	594.8368	1187.65905	0.84742	0.00050408	1.3264	0.00078896	2.1738	0.001293	594.8375726109198	69.565	0.3703	69.701	69.443	69.813	0.13522	-0.014743	-0.001496	NaN	31.955	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	453580			33873	10629	22406	22416							0.07272346205331814
LQYNHRVK	8	Unmodified	_LQYNHRVK_					0	0	0		ENSG00000131981|ENST00000254301|LGALS3;ENST00000556438.6_1_14:55604729-55611986:+|nuORF	ENSG00000131981|ENST00000254301|LGALS3	ENSG00000131981|ENST00000254301|LGALS3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.7713623046875	2	529.298707	1056.58286	-0.43836	-0.00023202	-2.2096	-0.0011695	-2.6479	-0.0014016	529.2979795597652	37.351	0.88588	37.297	36.961	37.847	-0.053558					35	19	3	0	0	0	0.4196	1	2587	2587		18.324	0	1	104300			33874	3757	22407	22417	38633	38633					0.05683387148565089
LQYSKKKKFV	10	Unmodified	_LQYSKKKKFV_					0	0	0			REV__ENST00000379887.8_2_15:72877639-72878143:+|nuORF	REV__ENST00000379887.8_2_15:72877639-72878143:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8934326171875	2	634.889898	1267.76524	1.9684	0.0012497	2.2129	0.0014049	4.1812	0.0026546	634.8913842364989	105.48	2.7267	105.63	104.93	107.65	0.15583					244	94	5	0	0	0	0.86718	1	12928	12928		27.882	1.8189	1	2461800	+		33875	25930	22408	22418	38634	38634					0.14207101770648478
LRAARLPRYQY	11	Unmodified	_LRAARLPRYQY_					0	0	0		ENSG00000182272|ENST00000329962|B4GALNT4	ENSG00000182272|ENST00000329962|B4GALNT4	ENSG00000182272|ENST00000329962|B4GALNT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.6044921875	3	469.60536	1405.79425	0.55813	0.0002621	-0.66502	-0.0003123	-0.1069	-5.02E-05	469.60497670438235	24.151	0.71179	24.165	23.841	24.553	0.013994					51	33	2	0	0	0	0.77205	1	805	805		17.167	1.2461	1	98715			33876	7444	22409	22419	38635	38635					0.1075863911964916
LRACICCSY	9	Unmodified	_LRACICCSY_					0	0	0			REV__ENST00000376436.5_1_20:25655347-25655485:-|nuORF	REV__ENST00000376436.5_1_20:25655347-25655485:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2251586914062	2	516.22719	1030.43983	0.16773	8.6587E-05	-3.2725	-0.0016893	-3.1047	-0.0016027	516.2253170876401	52.138	0.57215	52.562	52.276	52.848	0.42348					22	13	2	0	0	0	0.25483	1	5198	5198		68.787	8.4929	1	1162800	+		33877	25836	22410	22420	38636	38636					-0.07417447620832718
LRAGPPAR	8	Unmodified	_LRAGPPAR_					0	0	0			REV__ENST00000460734.5_1_21:46494558-46536853:+|nuORF	REV__ENST00000460734.5_1_21:46494558-46536853:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7750244140625	2	419.256311	836.49807	-0.27426	-0.00011499	0.55081	0.00023093	0.27655	0.00011594	419.2542487357972	42.604	0.43528	42.559	42.354	42.789	-0.045467					18	12	3	0	0	0	0.4196	1	2890	2890		25.45	0	1	68354	+		33878	26709	22411	22421	38637	38637					0.0732806140260891
LRAGVNTITT	10	Unmodified	_LRAGVNTITT_					0	0	0		ENST00000541658.2_1_14:35704472-35704841:-|nuORF;ENST00000401715.2_1_6:10118966-10119482:+|nuORF	ENST00000541658.2_1_14:35704472-35704841:-|nuORF	ENST00000541658.2_1_14:35704472-35704841:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3034057617188	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.86348	1	10606	10606		31.53	0	1	13160000			33879	11239	22412	22422	38638	38638					0.07224530363282611
LRAHPLFKDL	10	Unmodified	_LRAHPLFKDL_					0	0	0		ENSG00000185974|ENST00000335678|GRK1	ENSG00000185974|ENST00000335678|GRK1	ENSG00000185974|ENST00000335678|GRK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9103088378906	3	403.908269	1208.70298	1.4026	0.00056654	3.6025	0.0014551	5.0051	0.0020216	403.9097044639606	65.998	1.3411	66.384	65.959	67.3	0.38582					64	35	2	0	0	0	0.86621	1	7192	7192		26.063	3.5018	1	273570			33880	7765	22413	22423	38639	38639					0.10697375422319055
LRAIRLEHLRR	11	Unmodified	_LRAIRLEHLRR_					0	0	0			REV__ENSG00000125901|ENST00000380325|MRPS26	REV__ENSG00000125901|ENST00000380325|MRPS26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.30352783203125	3	478.303904	1431.88988	-1.7989	-0.00086042	-0.21	-0.00010045	-2.0089	-0.00096087	478.3036786471485	67.172	1.202	67.201	66.753	67.955	0.02858					107	52	3	0	0	0	0.81407	1	6426	6426		8.4073	1.7476	1	286540	+		33881	18681	22414	22424	38640	38640					0.19121412030517604
LRAISGSAIQK	11	Unmodified	_LRAISGSAIQK_					0	0	0		ENST00000399543.1_1_5:43042755-43043001:+|nuORF	ENST00000399543.1_1_5:43042755-43043001:+|nuORF	ENST00000399543.1_1_5:43042755-43043001:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.3314819335938	2	572.345855	1142.67716	0.49037	0.00028066	0.34517	0.00019756	0.83554	0.00047822	572.3513413269559	17.065	0.26148	16.455	16.305	16.567	-0.6107					15	5	4	0	0	0	0.17625	1	195	195		16.717	2.5803	1	72640			33882	11208	22415	22425	38641	38641					0.11152481180033647
LRAKVAAHWR	10	Unmodified	_LRAKVAAHWR_					0	0	0		ENST00000359551.6_1_8:145158926-145159115:-|nuORF;ENST00000534242.5_1_8:145157986-145159115:-|nuORF	ENST00000359551.6_1_8:145158926-145159115:-|nuORF	ENST00000359551.6_1_8:145158926-145159115:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3660278320312	2	604.362173	1206.70979	3.6458	0.0022034	3.7797	0.0022843	7.4255	0.0044877	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.86621	1	12797	12797		20.947	2.6848	1	5883900			33883	10430	22416	22426	38642	38642					0.11470733093551644
LRALGALRLQV	11	Unmodified	_LRALGALRLQV_					0	0	0			REV__ENST00000344575.4_1_7:72848585-72849218:+|nuORF	REV__ENST00000344575.4_1_7:72848585-72849218:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9295654296875	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.799	1	46.72	46.22	47.22	-0.079002								0	0	0	0.56276	1	3458	3458		17.167	6.1685	1		+		33884	25301	22417	22427	38643	38643					0.17569039722025082
LRALGALRLQV	11	Unmodified	_LRALGALRLQV_					0	0	0			REV__ENST00000344575.4_1_7:72848585-72849218:+|nuORF	REV__ENST00000344575.4_1_7:72848585-72849218:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9296569824219	3	403.931185	1208.77173	-1.067	-0.00043099	-3.6376	-0.0014693	-4.7046	-0.0019003	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.76322	1	4138	4138		12.433	0	1	5907700	+		33885	25301	22417	22427	38644	38644					0.17569039722025082
LRALIDRDA	9	Unmodified	_LRALIDRDA_					0	0	0			REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.8056640625	2	521.803823	1041.59309	-0.11311	-5.9022E-05	4.3887	0.00229	4.2756	0.002231	521.8059245005005	44.852	1.3013	45.315	44.578	45.88	0.46313					77	31	3	0	0	0	0.55097	1	4115	4115		49.442	5.3247	1	1090800	+		33886	22893	22418	22428	38645	38645					0.073959500831279
LRALLLAHKKK	11	Unmodified	_LRALLLAHKKK_					0	0	0		nc|ENSG00000111602|Q9UNS1-2|TIMELESS;ENSG00000111602|ENST00000553532|TIMELESS	nc|ENSG00000111602|Q9UNS1-2|TIMELESS	nc|ENSG00000111602|Q9UNS1-2|TIMELESS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.96063232421875	3	430.962597	1289.86596	-1.3804	-0.0005949	-3.5971	-0.0015502	-4.9775	-0.0021451	430.960928295924	39.883	1.7352	40.251	38.964	40.699	0.36797					162	41	5	0	0	0	0.79476	2	3333	3333;3343		12.433	7.0199	1	5466100			33887	2587	22419	22429	38646;38647	38646					0.23262178544155176
LRALLLAHKKK	11	Unmodified	_LRALLLAHKKK_					0	0	0		nc|ENSG00000111602|Q9UNS1-2|TIMELESS;ENSG00000111602|ENST00000553532|TIMELESS	nc|ENSG00000111602|Q9UNS1-2|TIMELESS	nc|ENSG00000111602|Q9UNS1-2|TIMELESS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.9589538574219	3	430.962597	1289.86596	-2.0493	-0.00088319	-3.5841	-0.0015446	-5.6335	-0.0024278	430.9609076496411	40.671	0.76293	41.063	40.687	41.45	0.39209					70	21	4	0	0	0	0.81219	2	3500	3488;3500		8.7993	2.0864	1	14497000			33888	2587	22419	22429	38648;38649	38649					0.23262178544155176
LRALLTDFP	9	Unmodified	_LRALLTDFP_					0	0	0		ENST00000458222.5_3_1:158900760-158901523:+|nuORF	ENST00000458222.5_3_1:158900760-158901523:+|nuORF	ENST00000458222.5_3_1:158900760-158901523:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.303955078125	2	523.305667	1044.59678	-0.1515	-7.9283E-05	-3.8817	-0.0020313	-4.0332	-0.0021106	523.3034922697021	101.03	1.8684	101.23	100.28	102.15	0.2058					77	44	4	0	0	0	0.78058	1	10576	10576		30.504	3.4563	1	790350			33889	11987	22420	22430	38650	38650					0.07626619856978323
LRALLWGPG	9	Unmodified	_LRALLWGPG_					0	0	0		ENST00000591462.5_1_19:11560227-11561639:+|nuORF	ENST00000591462.5_1_19:11560227-11561639:+|nuORF	ENST00000591462.5_1_19:11560227-11561639:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7964782714844	2	491.795269	981.575986	0.39746	0.00019547	1.1003	0.00054113	1.4978	0.0007366	491.7957851283323	56.607	1.0536	56.706	56.448	57.502	0.099186					72	48	2	0	0	0	0.7932	1	4782	4782		25.45	1.2474	1	1076800			33890	14273	22421	22431	38651	38651					0.08446074267999393
LRALQIALV	9	Unmodified	_LRALQIALV_					0	0	0		nc|ENSG00000181830|Q96A29-2|SLC35C1;ENSG00000181830|ENST00000314134|SLC35C1	nc|ENSG00000181830|Q96A29-2|SLC35C1	nc|ENSG00000181830|Q96A29-2|SLC35C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.82904052734375	2	498.831852	995.649151	-0.95175	-0.00047476	-1.6583	-0.00082723	-2.6101	-0.001302	498.83095095326985	43.888	0.64954	43.854	43.537	44.186	-0.033474					19	15	2	0	0	0	0.43338	1	3480	3480		55.504	11.387	1	72676			33891	7409	22422	22432	38652	38652					0.15115202990602938
LRALQIALV	9	Unmodified	_LRALQIALV_					0	0	0		nc|ENSG00000181830|Q96A29-2|SLC35C1;ENSG00000181830|ENST00000314134|SLC35C1	nc|ENSG00000181830|Q96A29-2|SLC35C1	nc|ENSG00000181830|Q96A29-2|SLC35C1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	498.831852	995.649151	0.28154	0.00014044	-2.3697	-0.0011821	-2.0882	-0.0010417	498.83062162734336	43.91	0.48676	43.883	43.686	44.173	-0.026764	-0.012142	-0.0011823	NaN	55.504	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58603			33892	7409	22422	22432							0.15115202990602938
LRALRATYQLT	11	Unmodified	_LRALRATYQLT_					0	0	0		nc|ENSG00000137411|Q5ST30-2|VARS2;ENST00000469358.5_1_6:30889720-30893984:+|nuORF;ENST00000477288.5_1_6:30884740-30893984:+|nuORF;nc|ENSG00000137411|Q5ST30-3|VARS2;ENSG00000137411|ENST00000676266|VARS2;nc|ENSG00000137411|Q5ST30-4|VARS2;ENST00000473916.1_1_6:30891971-30893984:+|nuORF	nc|ENSG00000137411|Q5ST30-2|VARS2	nc|ENSG00000137411|Q5ST30-2|VARS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002014160156	3	435.9261	1304.75647	-1.1524	-0.00050236	-4.2211	-0.0018401	-5.3735	-0.0023425	436.25752105955144	72.307	0.54126	72.693	72.293	72.834	0.38581					15	12	2	0	0	0	0.17272	1	8027	8027		25.892	0	1	83504			33893	4197	22423	22433	38653	38653					0.11628128134157123
LRALSPQS	8	Unmodified	_LRALSPQS_					0	0	0		ENST00000392507.7_1_17:45897353-45899174:-|nuORF	ENST00000392507.7_1_17:45897353-45899174:-|nuORF	ENST00000392507.7_1_17:45897353-45899174:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7569580078125	2	436.253434	870.492316	2.1857	0.00095352	1.2941	0.00056457	3.4798	0.0015181	436.2538705634068	114.35	2.7328	114.38	114.11	116.84	0.026459					117	82	2	0	0	0	0.88601	1	12552	12552		34.173	0.65696	1	78531			33894	11023	22424	22434	38654	38654					0.051889181002820806
LRAMAGSAYLQ	11	Unmodified	_LRAMAGSAYLQ_					0	0	0			REV__nc|ENSG00000197558|A2VEC9|SSPOP	REV__nc|ENSG00000197558|A2VEC9|SSPOP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8087768554688	2	590.81079	1179.60703	-0.8677	-0.00051265	-2.4314	-0.0014365	-3.2991	-0.0019492	590.8092605790742	59.99	1.6283	59.99	59.57	61.199	0					167	67	3	0	0	0	0.31674	1	5269	5269		71.877	3.0906	1	3570000	+		33895	30139	22425	22435	38655	38655					0.02440859519924743
LRAMETLELKG	11	Unmodified	_LRAMETLELKG_					0	0	0			REV__nc|ENSG00000104327|P05937-2|CALB1	REV__nc|ENSG00000104327|P05937-2|CALB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	631.357421875	2	630.852655	1259.69076	-0.65048	-0.00041036	-0.70622	-0.00044552	-1.3567	-0.00085588	631.3546699461936	60.449	0.56546	60.449	60.216	60.781	0					35	21	3	0	0	0	0.638	1	5297	5297		40.058	0	1	128150	+		33896	17447	22426	22436	38656	38656					0.0712997089694909
LRAQAPLL	8	Unmodified	_LRAQAPLL_					0	0	0			REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF	REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.2840576171875	2	441.281995	880.549437	-0.70166	-0.00030963	4.1987	0.0018528	3.497	0.0015432	441.2826067034688	68.58	0.35017	68.543	68.304	68.654	-0.036301					14	11	2	0	0	0	0.87922	1	6622	6622		31.955	0	1	39136	+		33897	24725	22427	22437	38657	38657					0.10438385376664883
LRAQAPLL	8	Unmodified	_LRAQAPLL_					0	0	0			REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF	REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	441.281995	880.549437	-0.70166	-0.00030963	4.1987	0.0018528	3.497	0.0015432	441.2826067034688	68.58	0.35017	68.543	68.304	68.654	-0.036301	0.16015	0.0015232	NaN	31.955	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39136	+		33898	24725	22427	22437							0.10438385376664883
LRAQAPLL	8	Unmodified	_LRAQAPLL_					0	0	0			REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF	REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	441.281995	880.549437	0.44752	0.00019748	2.4304	0.0010725	2.8779	0.00127	441.2810140436794	68.096	0.11543	68.223	68.133	68.249	0.12748	-0.16015	-3.7473E-05	NaN	31.955	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26052	+		33899	24725	22427	22437							0.10438385376664883
LRASLIEKS	9	Unmodified	_LRASLIEKS_					0	0	0			REV__ENSG00000138641|ENST00000402738|HERC3	REV__ENSG00000138641|ENST00000402738|HERC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.8076477050781	2	508.808574	1015.60259	0.65318	0.00033234	-2.4261	-0.0012344	-1.7729	-0.00090206	508.80731297639136	83.188	1.9706	83.335	82.631	84.602	0.14695					106	45	4	0	0	0	0.7932	1	8022	8022		20.947	0.95016	1	3797600	+		33900	19486	22428	22438	38658	38658					0.09541718368666352
LRATRSRAV	9	Unmodified	_LRATRSRAV_					0	0	0			REV__ENST00000531467.5_1_19:1041242-1041597:+|nuORF	REV__ENST00000531467.5_1_19:1041242-1041597:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3169555664062	2	515.317432	1028.62031	1.0881	0.00056071	-3.9315	-0.002026	-2.8434	-0.0014652	515.3153446059962	21.977	0.57329	21.534	21.235	21.808	-0.44324					27	12	3	0	0	0	0.76764	1	841	841		34.173	0	1	163770	+		33901	28219	22429	22439	38659	38659					0.10714478414161022
LRAVGLKKG	9	Unmodified	_LRAVGLKKG_					0	0	0		ENSG00000138411|ENST00000644978|HECW2	ENSG00000138411|ENST00000644978|HECW2	ENSG00000138411|ENST00000644978|HECW2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.0180969238281	2	471.316369	940.618185	-1.0674	-0.00050308	-1.7005	-0.00080147	-2.7679	-0.0013046	471.3154516524934	21.735	0.61229	21.781	21.327	21.939	0.045399					39	29	2	0	0	0	0.20789	1	575	575		24.203	0	1	61022			33902	4294	22430	22440	38660	38660					0.14550049676370236
LRAVLLRLHR	10	Unmodified	_LRAVLLRLHR_					0	0	0		nc|ENSG00000135637|Q17RM4-3|CCDC142;nc|ENSG00000135637|Q17RM4-2|CCDC142;ENSG00000135637|ENST00000393965|CCDC142	nc|ENSG00000135637|Q17RM4-3|CCDC142	nc|ENSG00000135637|Q17RM4-3|CCDC142	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.9169311523438	2	623.914573	1245.81459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.21	1	110.28	109.78	110.78	0.073685								0	0	0	0.45132	1	11843	11843		16.473	0	1				33903	4042	22431	22441	38661	38661					0.2015185457012194
LRAVLSRAM	9	Unmodified	_LRAVLSRAM_					0	0	0		ENSG00000184677|ENST00000375647|ZBTB40	ENSG00000184677|ENST00000375647|ZBTB40	ENSG00000184677|ENST00000375647|ZBTB40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.806396484375	2	508.805311	1015.59607	1.6039	0.0008161	3.021	0.0015371	4.625	0.0023532	508.80675407438747	90.171	1.1085	90.101	89.611	90.719	-0.069977					56	25	3	0	0	0	0.78058	1	9470	9470		30.504	3.8107	1	1285500			33904	7638	22432	22442	38662	38662					0.08889501936300803
LRAWHMEF	8	Unmodified	_LRAWHMEF_					0	0	0		ENST00000321205.9_1_22:30886096-30899699:-|nuORF	ENST00000321205.9_1_22:30886096-30899699:-|nuORF	ENST00000321205.9_1_22:30886096-30899699:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.162353515625	2	545.268561	1088.52257	-1.7107	-0.0009328	3.8181	0.0020819	2.1074	0.0011491	545.2704307360785	39.344	0.93455	39.712	39.258	40.192	0.36797					54	21	3	0	0	0	0.4196	1	3283	3283		55.504	4.1688	1	674570			33905	10035	22433	22443	38663	38663					-0.018150465061808063
LRCGDFSR	8	Unmodified	_LRCGDFSR_					0	0	0		ENSG00000092470|ENST00000263795|WDR76	ENSG00000092470|ENST00000263795|WDR76	ENSG00000092470|ENST00000263795|WDR76	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.992431640625	2	477.234719	952.454884	-0.4166	-0.00019881	4.0394	0.0019277	3.6228	0.0017289	477.2365019412457	72.12	0.41565	72.506	72.209	72.625	0.38581					12	9	2	0	0	0	0.4196	1	8048	8048		31.53	0	1	64672			33906	1701	22434	22444	38664	38664					-0.023244964369837362
LRCLYDLISL	10	Unmodified	_LRCLYDLISL_					0	0	0		chr14:27613496-27616998|18|42.0|0.37|6.83|+|2|TE_info:L1MEc,L1MEc_dup14792,L1,LINE,acceptor,+,27616998,27617195|LINC00645,None|1	chr14:27613496-27616998|18|42.0|0.37|6.83|+|2|TE_info:L1MEc,L1MEc_dup14792,L1,LINE,acceptor,+,27616998,27617195|LINC00645,None|1	chr14:27613496-27616998|18|42.0|0.37|6.83|+|2|TE_info:L1MEc,L1MEc_dup14792,L1,LINE,acceptor,+,27616998,27617195|LINC00645,None|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.8828735351562	2	604.839017	1207.66348	-0.10343	-6.2556E-05	-3.1294	-0.0018928	-3.2328	-0.0019553	604.8372858379563	103.41	0.19569	103.45	103.28	103.47	0.041481					6	4	2	0	0	0	0.37624	1	11200	11200		30.318	1.1477	1	88212			33907	165	22435	22445	38665	38665					0.06795487356589547
LRDLPAAPLP	10	Unmodified	_LRDLPAAPLP_					0	0	0			REV__ENST00000270502.6_1_19:11039810-11040236:+|nuORF	REV__ENST00000270502.6_1_19:11039810-11040236:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8182373046875	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.64457	1	8311	8311		47.657	6.8792	1	1159800	+		33908	24531	22436	22446	38666	38666					0.09498308748334239
LRDLVAEHQAK	11	Unmodified	_LRDLVAEHQAK_					0	0	0		nc|ENSG00000166133|Q8IZ73-2|RPUSD2;ENSG00000166133|ENST00000315616|RPUSD2	nc|ENSG00000166133|Q8IZ73-2|RPUSD2	nc|ENSG00000166133|Q8IZ73-2|RPUSD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3595581054688	2	640.359493	1278.70443	2.419	0.001549	-3.4406	-0.0022032	-1.0216	-0.00065422	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.66009	1	10835	10835		37.508	1.0614	1	625580			33909	6159	22437	22447	38667	38667					0.07622964720417258
LRDRAGVLPG	10	Unmodified	_LRDRAGVLPG_					0	0	0			REV__ENST00000478260.5_1_11:3108637-3108949:-|nuORF	REV__ENST00000478260.5_1_11:3108637-3108949:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3109130859375	2	527.311815	1052.60908	0.29221	0.00015408	-1.3979	-0.00073715	-1.1057	-0.00058307	527.3109426709796	80.891	0.85687	81.312	80.891	81.748	0.4215					62	20	4	0	0	0	0.57924	1	9321	9321		51.193	14.746	1	2260400	+		33910	27376	22438	22448	38668	38668					0.08487656320039605
LRDRAGVLPG	10	Unmodified	_LRDRAGVLPG_					0	0	0			REV__ENST00000478260.5_1_11:3108637-3108949:-|nuORF	REV__ENST00000478260.5_1_11:3108637-3108949:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3104248046875	2	527.311815	1052.60908	0.22805	0.00012025	-1.4606	-0.00077019	-1.2325	-0.00064993	527.3109109335428	80.785	0.86409	81.312	80.907	81.771	0.52676					54	20	3	0	0	0	0.40664	1	9323	9323		63.534	8.7575	1	2180000	+		33911	27376	22438	22448	38669	38669					0.08487656320039605
LRDRRRLQESI	11	Unmodified	_LRDRRRLQESI_					0	0	0			REV__nc|ENSG00000085978|Q676U5-4|ATG16L1	REV__nc|ENSG00000085978|Q676U5-4|ATG16L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.282470703125	3	481.283057	1440.82734	-0.094123	-4.53E-05	0.1624	7.816E-05	0.068276	3.286E-05	481.28309921299575	101.72	1.6724	101.74	100.69	102.36	0.01989					105	39	3	0	0	0	0.79476	1	10878	10878		12.433	2.7867	1	543600	+		33912	16901	22439	22449	38670	38670					0.12456221171714787
LRDVPHIRIVF	11	Unmodified	_LRDVPHIRIVF_					0	0	0			REV__ENSG00000150893|ENST00000280481|FREM2	REV__ENSG00000150893|ENST00000280481|FREM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.2789611816406	3	455.610223	1363.80884	-1.0996	-0.00050099	-3.221	-0.0014675	-4.3206	-0.0019685	455.608769026608	69.403	0.69586	69.468	69.035	69.731	0.065506					64	33	3	0	0	0	0.71803	1	6249	6249		28.577	9.3141	1	225360	+		33913	20223	22440	22450	38671	38671					0.14148711267762337
LREAFLKMLRF	11	Unmodified	_LREAFLKMLRF_					0	0	0		ENSG00000121381|ENST00000240691|TAS2R9	ENSG00000121381|ENST00000240691|TAS2R9	ENSG00000121381|ENST00000240691|TAS2R9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.27813720703125	3	475.279597	1422.81696	-1.0084	-0.00047927	-1.3856	-0.00065854	-2.394	-0.0011378	475.2788276348761	58.492	1.5243	59.046	58.555	60.079	0.55323					118	37	4	0	0	0	0.76892	1	6137	6137		17.833	1.9125	1	2160600			33914	3180	22441	22451	38672	38672					0.12246522192890552
LREAPAGR	8	Unmodified	_LREAPAGR_					0	0	0		ENST00000219334.9_1_16:68405746-68406052:-|nuORF	ENST00000219334.9_1_16:68405746-68406052:-|nuORF	ENST00000219334.9_1_16:68405746-68406052:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25115966796875	2	435.251226	868.487899	0.18475	8.0413E-05	1.8989	0.0008265	2.0837	0.00090692	435.25121288017317	76.886	2.3553	77.455	76.392	78.747	0.56836					103	62	3	0	0	0	0.87064	1	8827	8827		29.15	0	1	485820			33915	9162	22442	22452	38673	38673					0.04839453677379879
LREEVLPK	8	Unmodified	_LREEVLPK_					0	0	0		nc|ENSG00000214193|A4FU49|SH3D21;nc|ENSG00000214193|A4FU49-3|SH3D21;ENSG00000214193|ENST00000453908|SH3D21	nc|ENSG00000214193|A4FU49|SH3D21	nc|ENSG00000214193|A4FU49|SH3D21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.2984619140625	2	492.297842	982.581131	-0.51073	-0.00025143	0.16757	8.2494E-05	-0.34316	-0.00016894	492.2977647758313	53.848	1.3804	54.432	53.872	55.253	0.58474					77	32	4	0	0	0	0.90837	1	5505	5505		56.721	0	1	1886000			33916	8620	22443	22453	38674	38674					0.08914333339942004
LREFSLAWSA	10	Unmodified	_LREFSLAWSA_					0	0	0			REV__ENSG00000169220|ENST00000408923|RGS14	REV__ENSG00000169220|ENST00000408923|RGS14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.309326171875	2	590.31148	1178.60841	-0.45325	-0.00026756	-2.7332	-0.0016135	-3.1865	-0.001881	590.309789757865	32.515	0.5012	32.526	32.269	32.77	0.010899					34	13	3	0	0	0	0.86348	1	1821	1821		31.53	1.2121	1	121810	+		33917	21561	22444	22454	38675	38675					0.026248168803022054
LREIEQQH	8	Unmodified	_LREIEQQH_					0	0	0			REV__ENST00000520446.5_1_8:133637625-133687739:-|nuORF	REV__ENST00000520446.5_1_8:133637625-133687739:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.7803955078125	2	526.777805	1051.54106	-0.17134	-9.0257E-05	4.1538	0.0021881	3.9825	0.0020979	526.7798231618902	62.475	0.84435	62.589	62.338	63.183	0.11388					86	41	3	0	0	0	0.93293	1	5450	5450		51.335	7.2187	1	599530	+		33918	18817	22445	22455	38676	38676					0.017347866693853575
LREIIKQTKH	10	Unmodified	_LREIIKQTKH_					0	0	0		ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.9269714355469	3	422.594461	1264.76155	-0.026175	-1.1061E-05	-4.2947	-0.0018149	-4.3209	-0.001826	422.59256755528145	49.138	2.4235	49.133	48.474	50.898	-0.0056419					208	62	5	0	0	0	0.86207	1	4216	4216		24.232	0.85391	1	1959300			33919	6015	22446	22456	38677	38677					0.13976431996798055
LREILGQTLG	10	Unmodified	_LREILGQTLG_					0	0	0			REV__nc|ENSG00000128607|Q6PID8-2|KLHDC10	REV__nc|ENSG00000128607|Q6PID8-2|KLHDC10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3268432617188	2	550.327131	1098.63971	-1.4511	-0.00079856	1.2412	0.00068307	-0.20986	-0.00011549	550.3279242402356	100.07	1.1382	100.24	99.716	100.85	0.17199					63	25	3	0	0	0	0.86348	1	10359	10359		31.53	4.8369	1	345000	+		33920	18784	22447	22457	38678	38678					0.09433389914443069
LREISPPKIFI	11	Unmodified	_LREISPPKIFI_					0	0	0			REV__ENST00000496637.6_1_10:28342996-28348461:-|nuORF	REV__ENST00000496637.6_1_10:28342996-28348461:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.27288818359375	3	438.271096	1311.79146	2.0592	0.0009025	2.2865	0.0010021	4.3457	0.0019046	438.27198607190746	106.29	0.8153	106.33	105.9	106.72	0.03688					74	18	5	0	0	0	0.71803	1	11618	11618		28.577	4.3449	1	4519600	+		33921	20202	22448	22458	38679	38679					0.14803370942127003
LREKAGLP	8	Unmodified	_LREKAGLP_					0	0	0		ENST00000586719.5_1_19:12883476-12885666:-|nuORF	ENST00000586719.5_1_19:12883476-12885666:-|nuORF	ENST00000586719.5_1_19:12883476-12885666:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2705383300781	2	442.271627	882.528701	-0.83468	-0.00036915	-0.31464	-0.00013916	-1.1493	-0.00050831	442.2714568018733	84.382	2.5266	84.818	83.748	86.275	0.43538					144	61	4	0	0	0	0.9295	1	9748	9748		55.504	2.1528	1	3031500			33922	14175	22449	22459	38680	38680					0.08273794996978268
LRELGSGSL	9	Unmodified	_LRELGSGSL_					0	0	0			REV__ENSG00000213380|ENST00000306875|COG8	REV__ENSG00000213380|ENST00000306875|COG8	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2652282714844	2	466.263999	930.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.752	1	36.733	36.233	37.233	-0.018673								0	0	0	0.05586	1	2375	2375		84.916	2.6105	1		+		33923	23614	22450	22460	38681	38681					0.045408834091631434
LRELMVVIRIW	11	Unmodified	_LRELMVVIRIW_					0	0	0		nc|ENSG00000175221|Q9Y2X0-2|MED16;nc|ENSG00000175221|Q9Y2X0-3|MED16;ENSG00000175221|ENST00000325464|MED16	nc|ENSG00000175221|Q9Y2X0-2|MED16	nc|ENSG00000175221|Q9Y2X0-2|MED16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6237487792969	3	476.623364	1426.84826	-1.6911	-0.000806	2.4072	0.0011473	0.71614	0.00034133	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.7896	1	12180	12180		13.508	1.0751	1	2577100			33924	7000	22451	22461	38682	38682					0.15191095226987272
LRENIPKID	9	Unmodified	_LRENIPKID_					0	0	0			REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3184204101562	2	549.319306	1096.62406	-1.4544	-0.00079891	-1.5897	-0.00087326	-3.0441	-0.0016722	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.78124	1	10471	10471		30.318	0	1	2310400	+		33925	16754	22452	22462	38683	38683					0.0796110339738334
LREPPGPALL	10	Unmodified	_LREPPGPALL_					0	0	0			REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.818941	1061.62333	-0.033207	-1.766E-05	-3.353	-0.0017832	-3.3862	-0.0018009	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.5766	1	8639	8639		51.335	3.4199	1	1254600	+		33926	21420	22453	22463	38684	38684					0.09498308748334239
LREPPGPALL	10	Unmodified	_LREPPGPALL_					0	0	0			REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	REV__ENST00000531423.1_1_8:145696018-145698106:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.81689453125	2	531.818941	1061.62333	-0.69524	-0.00036974	-3.1977	-0.0017006	-3.8929	-0.0020703	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.6398	1	10266	10266		47.916	0.25827	1	1296000	+		33927	21420	22453	22463	38685	38685					0.09498308748334239
LRERLFRWQQI	11	Unmodified	_LRERLFRWQQI_					0	0	0		ENSG00000109689|ENST00000467087|STIM2;nc|ENSG00000109689|Q9P246-2|STIM2;nc|ENSG00000109689|Q9P246-3|STIM2	ENSG00000109689|ENST00000467087|STIM2	ENSG00000109689|ENST00000467087|STIM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3161010742188	3	515.631798	1543.87356	0.16095	8.299E-05	-4.0205	-0.0020731	-3.8595	-0.0019901	515.6295013207823	22.122	0.3777	21.512	21.367	21.745	-0.6107					10	9	2	0	0	0	0.18034	1	872	872		16.53	4.5975	1	31026			33928	2478	22454	22464	38686	38686					0.12338286073782001
LRETLWGA	8	Unmodified	_LRETLWGA_					0	0	0			REV__ENST00000603720.1_1_2:121624870-121624969:-|nuORF	REV__ENST00000603720.1_1_2:121624870-121624969:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.2598571777344	2	473.261259	944.507966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.638	1	21.581	21.081	22.081	-0.057203								0	0	0	0.29755	1	612	612		24.203	2.2429	1		+		33929	29347	22455	22465	38687	38687					0.033492046173250856
LREVKKDT	8	Unmodified	_LREVKKDT_					0	0	0		nc|ENSG00000163673|Q9C098|DCLK3;ENSG00000163673|ENST00000636136|DCLK3	nc|ENSG00000163673|Q9C098|DCLK3	nc|ENSG00000163673|Q9C098|DCLK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7928771972656	2	494.792924	987.571294	0.53507	0.00026475	-0.23226	-0.00011492	0.30282	0.00014983	494.7926397196607	26.556	0.66258	26.601	26.257	26.92	0.045507					37	18	3	0	0	0	0.87479	1	1119	1119		30.504	4.4403	1	91230			33930	5850	22456	22466	38688	38688					0.07701145334567627
LREVMLRKKH	10	Unmodified	_LREVMLRKKH_					0	0	0			REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26776123046875	3	437.267691	1308.78124	-1.575	-0.00068869	2.0109	0.00087928	0.43587	0.00019059	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.86742	1	3982	3982		27.644	5.0823	1	3429700	+		33931	29869	22457	22467	38689	38689					0.13920484735899663
LREVMLRKKH	10	Unmodified	_LREVMLRKKH_					0	0	0			REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.267822265625	3	437.267691	1308.78124	-1.5729	-0.00068777	2.064	0.00090252	0.49113	0.00021475	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.86931	1	4128	4128		14.086	0.57807	1	4358700	+		33932	29869	22457	22467	38690	38690					0.13920484735899663
LREVMLRKKH	10	Unmodified	_LREVMLRKKH_					0	0	0			REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26751708984375	3	437.267691	1308.78124	-0.59734	-0.0002612	0.79451	0.00034741	0.19717	8.6217E-05	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.85086	1	4411	4411		19.263	2.0959	1	2564600	+		33933	29869	22457	22467	38691	38691					0.13920484735899663
LRFALLLKTA	10	Unmodified	_LRFALLLKTA_					0	0	0			REV__ENST00000322342.3_1_18:72913651-72913687:-|nuORF	REV__ENST00000322342.3_1_18:72913651-72913687:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.326171875	2	573.373884	1144.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.68	1	114.61	114.11	115.11	-0.07								0	0	0	0.45132	1	12393	12393		14.137	1.1779	1		+		33934	25023	22458	22468	38692	38692					0.16663734087524062
LRFEESVGDV	10	Unmodified	_LRFEESVGDV_					0	0	0			REV__nc|ENSG00000116147|Q92752-2|TNR	REV__nc|ENSG00000116147|Q92752-2|TNR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.3565063476562	2	575.790578	1149.5666	1.6262	0.00093633	2.3329	0.0013433	3.9591	0.0022796	576.2917410499048	99.98	0.83203	100.33	99.861	100.69	0.34591					41	20	3	0	0	0	0.37624	1	12094	12094		19.997	4.355	1	210150	+		33935	18183	22459	22469	38693	38693					-0.002197835988681618
LRFEESVGDV	10	Unmodified	_LRFEESVGDV_					0	0	0			REV__nc|ENSG00000116147|Q92752-2|TNR	REV__nc|ENSG00000116147|Q92752-2|TNR	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	575.790578	1149.5666	0.9501	0.00054706	2.4783	0.001427	3.4284	0.001974	576.2920114708885	99.97	1.1113	100.3	99.61	100.72	0.33295	-0.011139	7.924E-05	NaN	19.997	49	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	154820	+		33936	18183	22459	22469							-0.002197835988681618
LRFGQLGE	8	Unmodified	_LRFGQLGE_					0	0	0		ENST00000493559.1_1_9:123533755-123535054:-|nuORF	ENST00000493559.1_1_9:123533755-123535054:-|nuORF	ENST00000493559.1_1_9:123533755-123535054:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.2535705566406	2	460.253434	918.492316	-0.18509	-8.519E-05	0.41763	0.00019221	0.23253	0.00010702	460.25349150477365	48.345	1.4474	49.249	48.925	50.372	0.90424					63	35	3	0	0	0	0.5397	1	4685	4685		73.975	5.1879	1	1392900			33937	12731	22460	22470	38694	38694					0.029809181002860896
LRFGRLRN	8	Unmodified	_LRFGRLRN_					0	0	0		ENSG00000196878|ENST00000356082|LAMB3	ENSG00000196878|ENST00000356082|LAMB3	ENSG00000196878|ENST00000356082|LAMB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3143920898438	2	516.314692	1030.61483	-1.5619	-0.00080641	0.27971	0.00014442	-1.2821	-0.00066199	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86288	1	12639	12639		26.796	2.5934	1	4038100			33938	8111	22461	22471	38695	38695					0.10074799622339015
LRFHITVNVL	10	Unmodified	_LRFHITVNVL_					0	0	0			REV__ENST00000394321.9_1_19:7591427-7598678:+|nuORF;REV__ENSG00000090674|ENST00000264079|MCOLN1	REV__ENSG00000090674|ENST00000264079|MCOLN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.582763671875	3	404.580152	1210.71863	2.5442	0.0010293	3.8045	0.0015392	6.3487	0.0025686	404.5815915077912	30.915	0.71748	30.904	30.626	31.344	-0.010656					46	17	3	0	0	0	0.86471	1	1659	1659		22.562	0	1	137840	+		33939	26078;16995	22462	22472	38696	38696					0.12169661939356047
LRFIKRAM	8	Unmodified	_LRFIKRAM_					0	0	0		ENST00000529299.2_1_1:110170417-110171118:+|nuORF;ENST00000526301.5_1_1:110162158-110172443:+|nuORF;nc|ENSG00000116337|Q01433-5|AMPD2;nc|ENSG00000116337|Q01433-2|AMPD2;nc|ENSG00000116337|Q01433-4|AMPD2;ENSG00000116337|ENST00000528667|AMPD2	ENST00000529299.2_1_1:110170417-110171118:+|nuORF	ENST00000529299.2_1_1:110170417-110171118:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	517.8192749023438	2	517.818221	1033.62189	-0.046234	-2.3941E-05	1.7495	0.00090591	1.7032	0.00088197	517.8189821353725	93.25	1.5107	93.32	92.756	94.266	0.06987					100	35	4	0	0	0	0.86288	1	9703	9703		26.796	0	1	1007500			33940	2917	22463	22473	38697	38697					0.10642396178582203
LRFKHEATREA	11	Unmodified	_LRFKHEATREA_					0	0	0		ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;ENSG00000136861|ENST00000349780|CDK5RAP2	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.2491760253906	3	453.249354	1356.72623	-0.33158	-0.00015029	0.30091	0.00013639	-0.030672	-1.3902E-05	453.24944205426203	24.005	1.7673	23.959	23.523	25.29	-0.04598					97	41	4	0	0	0	0.74771	1	876	876		22.562	3.2989	1	180870			33941	4145	22464	22474	38698	38698					0.062137694689681666
LRFLRARKFHQ	11	Unmodified	_LRFLRARKFHQ_					0	0	0		ENST00000521189.1_1_8:62212560-62289213:+|nuORF;nc|ENSG00000177182|Q8IUQ0-2|CLVS1;ENSG00000177182|ENST00000325897|CLVS1	ENST00000521189.1_1_8:62212560-62289213:+|nuORF	ENST00000521189.1_1_8:62212560-62289213:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2992248535156	3	491.29675	1470.86842	2.8435	0.001397	1.7546	0.00086204	4.5981	0.002259	491.29766695504253	111.68	0.68246	111.66	111.39	112.07	-0.025414					47	26	2	0	0	0	0.80813	1	12352	12352		9.6461	0.43434	1	55512			33942	7123	22465	22475	38699	38699					0.15182027001833376
LRFLVVFIFCI	11	Unmodified	_LRFLVVFIFCI_					0	0	0			REV__ENST00000495562.5_1_1:202910703-202913132:-|nuORF	REV__ENST00000495562.5_1_1:202910703-202913132:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30096435546875	3	457.273672	1368.79919	-0.038848	-1.7764E-05	2.965	0.0013558	2.9262	0.0013381	457.274805881574	51.409	0.24871	51.422	51.267	51.515	0.012436					8	5	3	0	0	0	0.17863	1	4409	4409		14.086	0.57807	1	30508	+		33943	27739	22466	22476	38700	38700					0.1295380693804873
LRFNKSRVN	9	Unmodified	_LRFNKSRVN_					0	0	0			REV__ENSG00000197816|ENST00000529487|CCDC180	REV__ENSG00000197816|ENST00000529487|CCDC180	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.33056640625	2	567.330539	1132.64652	0.48094	0.00027285	-1.4928	-0.00084691	-1.0119	-0.00057406	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.7932	1	9114	9114		21.96	2.8564	1	6590100	+		33944	23272	22467	22477	38701	38701					0.0855074758567298
LRFNPPSA	8	Unmodified	_LRFNPPSA_					0	0	0			REV__ENSG00000121653|ENST00000241014|MAPK8IP1	REV__ENSG00000121653|ENST00000241014|MAPK8IP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.24908447265625	2	451.248152	900.481751	0.43681	0.00019711	1.3662	0.00061648	1.803	0.00081359	451.2486012382637	65.524	1.1913	65.65	65.09	66.281	0.12532					110	62	3	0	0	0	0.89962	1	5798	5798		38.806	10.552	1	1138900	+		33945	18462	22468	22478	38702	38702					0.027529354458465605
LRFPNRLH	8	Unmodified	_LRFPNRLH_					0	0	0		ENST00000462039.5_1_6:74176287-74189878:+|nuORF;ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.8079833984375	2	526.809242	1051.60393	-0.037043	-1.9515E-05	-2.2057	-0.001162	-2.2427	-0.0011815	526.8079411043393	101.16	2.0772	101.19	100.26	102.33	0.031029					128	48	4	0	0	0	0.79972	2	10774	10774;10796		62.978	4.1965	1	2562600			33946	4000	22469	22479	38703;38704	38703					0.08019397248085625
LRFPNRLH	8	Unmodified	_LRFPNRLH_					0	0	0		ENST00000462039.5_1_6:74176287-74189878:+|nuORF;ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.8081665039062	2	526.809242	1051.60393	1.2418	0.00065418	-3.7046	-0.0019516	-2.4628	-0.0012974	526.8072201508533	100.99	2.1143	101.03	100.03	102.14	0.046349					121	49	4	0	0	0	0.79972	2	10872	10872;10896		62.978	2.0065	1	2474600			33947	4000	22469	22479	38705;38706	38705					0.08019397248085625
LRFPNRLH	8	Unmodified	_LRFPNRLH_					0	0	0		ENST00000462039.5_1_6:74176287-74189878:+|nuORF;ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.8078002929688	2	526.809242	1051.60393	-0.10527	-5.5459E-05	-2.5837	-0.0013611	-2.6889	-0.0014166	526.8075985378076	98.641	0.66186	98.868	98.39	99.052	0.2269					35	14	3	0	0	0	0.93529	1	10235	10235		52.299	0.96372	1	911130			33948	4000	22469	22479	38707	38707					0.08019397248085625
LRFPNRLH	8	Unmodified	_LRFPNRLH_					0	0	0		ENST00000462039.5_1_6:74176287-74189878:+|nuORF;ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.8081665039062	2	526.809242	1051.60393	-0.10054	-5.2966E-05	-2.1184	-0.001116	-2.2189	-0.0011689	526.80805153199	100.65	1.7806	100.86	100.42	102.2	0.21511					97	42	4	0	0	0	0.52826	6	10508	10496;10508;10520;10533;10545;10593		74.517	15.874	1	2744500			33949	4000	22469	22479	38708;38709;38710;38711;38712;38713	38709					0.08019397248085625
LRFPNRLH	8	Unmodified	_LRFPNRLH_					0	0	0		ENST00000462039.5_1_6:74176287-74189878:+|nuORF;ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.80859375	2	526.809242	1051.60393	0.8285	0.00043646	-2.9233	-0.00154	-2.0948	-0.0011036	526.8075886317766	100.77	1.8367	100.92	100.51	102.34	0.14352					113	44	4	0	0	0	0.79972	1	10562	10562		62.978	15.321	1	2715400			33950	4000	22469	22479	38714	38714					0.08019397248085625
LRFPNRLH	8	Unmodified	_LRFPNRLH_					0	0	0		ENST00000462039.5_1_6:74176287-74189878:+|nuORF;ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	ENST00000462039.5_1_6:74176287-74189878:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.8140258789062	2	526.809242	1051.60393	-1.5277	-0.0008048	-1.1665	-0.00061454	-2.6942	-0.0014193	526.8083649292871	98.814	0.65662	99	98.5	99.157	0.18582					32	14	3	0	0	0	0.79972	1	10174	10174		62.978	0	1	791290			33951	4000	22469	22479	38715	38715					0.08019397248085625
LRFRHKPPVE	10	Unmodified	_LRFRHKPPVE_					0	0	0		nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;nc|ENSG00000107736|Q9H251-11|CDH23;nc|ENSG00000107736|Q9H251-10|CDH23;nc|ENSG00000107736|Q9H251-9|CDH23;nc|ENSG00000107736|Q9H251-7|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	639.8783569335938	2	639.875114	1277.73567	0.30132	0.00019281	3.8122	0.0024393	4.1135	0.0026321	639.8780868616888	30.136	0.2764	30.248	30.014	30.29	0.11225					19	13	2	0	0	0	0.86348	1	1319	1319		31.53	4.8369	1	81134			33952	2362	22470	22480	38716	38716					0.10791582545175515
LRFRHKPPVE	10	Unmodified	_LRFRHKPPVE_					0	0	0		nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;nc|ENSG00000107736|Q9H251-11|CDH23;nc|ENSG00000107736|Q9H251-10|CDH23;nc|ENSG00000107736|Q9H251-9|CDH23;nc|ENSG00000107736|Q9H251-7|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	639.875114	1277.73567	0.9074	0.00058062	6.3069	0.0040356	7.2143	0.0046162	639.8803831260171	29.872	0.064278	29.884	29.844	29.908	0.011229	-0.18241	0.00066378	NaN	31.53	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60396			33953	2362	22470	22480							0.10791582545175515
LRFRPSAPE	9	Unmodified	_LRFRPSAPE_					0	0	0		ENST00000263734.4_1_2:46524583-46524640:+|nuORF	ENST00000263734.4_1_2:46524583-46524640:+|nuORF	ENST00000263734.4_1_2:46524583-46524640:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7975463867188	2	536.79854	1071.58253	-0.98554	-0.00052903	-0.55673	-0.00029885	-1.5423	-0.00082789	536.7980547573918	57.208	0.64578	57.602	57.284	57.929	0.39408					28	15	3	0	0	0	0.48102	1	5919	5919		52.937	5.2794	1	659110			33954	9463	22471	22481	38717	38717					0.04959967428703749
LRFTKLESL	9	Unmodified	_LRFTKLESL_					0	0	0			REV__ENST00000545081.5_1_16:57093337-57116437:+|nuORF	REV__ENST00000545081.5_1_16:57093337-57116437:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8294677734375	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.71772	1	8641	8641		39.253	0	1	1844500	+		33955	19646	22472	22482	38718	38718					0.10094577919790026
LRFYKEKKEI	10	Unmodified	_LRFYKEKKEI_					0	0	0		ENSG00000145721|ENST00000274382|LIX1	ENSG00000145721|ENST00000274382|LIX1	ENSG00000145721|ENST00000274382|LIX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.26678466796875	3	451.934484	1352.78162	-0.13819	-6.2454E-05	-3.9218	-0.0017724	-4.06	-0.0018349	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.86621	1	10674	10674		26.063	2.6855	1	924270			33956	4786	22473	22483	38719	38719					0.11934182936715843
LRFYSRLYLPR	11	Unmodified	_LRFYSRLYLPR_					0	0	0		chr13:24597277-24597387|35|12.49|0.67|4.22|+|1|None,TPTE2P6|1	chr13:24597277-24597387|35|12.49|0.67|4.22|+|1|None,TPTE2P6|1	chr13:24597277-24597387|35|12.49|0.67|4.22|+|1|None,TPTE2P6|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.6260681152344	3	495.289261	1482.84595	0.024428	1.2099E-05	4.3848	0.0021717	4.4092	0.0021838	495.29144035322514	17.982	0.71194	17.36	17.147	17.859	-0.62141					34	16	3	0	0	0	0.74405	1	325	325		23.378	5.5448	1	198500			33957	149	22474	22484	38720	38720					0.12384382813547745
LRGAPCLLAL	10	Unmodified	_LRGAPCLLAL_					0	0	0			REV__ENST00000566104.1_1_16:67189803-67193780:-|nuORF	REV__ENST00000566104.1_1_16:67189803-67193780:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.808349609375	2	513.810062	1025.60557	0.14837	7.6233E-05	-2.2121	-0.0011366	-2.0637	-0.0010603	513.8088134492856	48.067	1.4161	48.057	47.714	49.13	-0.0093269					122	36	4	0	0	0	0.85939	1	4046	4046		23.042	1.0826	1	1557500	+		33958	28862	22475	22485	38721	38721					0.09379270221802471
LRGAWPTLL	9	Unmodified	_LRGAWPTLL_					0	0	0		ENST00000454838.6_1_11:869018-869621:-|nuORF	ENST00000454838.6_1_11:869018-869621:-|nuORF	ENST00000454838.6_1_11:869018-869621:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8085327148438	2	513.808377	1025.6022	-0.43911	-0.00022562	1.5531	0.00079801	1.114	0.00057239	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.78536	1	4392	4392		29.15	4.9468	1	1606900			33959	11946	22476	22486	38722	38722					0.09042343439477918
LRGAWPTLL	9	Unmodified	_LRGAWPTLL_					0	0	0		ENST00000454838.6_1_11:869018-869621:-|nuORF	ENST00000454838.6_1_11:869018-869621:-|nuORF	ENST00000454838.6_1_11:869018-869621:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8084716796875	2	513.808377	1025.6022	-0.49115	-0.00025236	1.4357	0.00073767	0.94454	0.00048531	513.8089618478288	47.549	2.118	48.472	47.871	49.989	0.92315					109	52	4	0	0	0	0.7932	1	4574	4574		23.042	1.0826	1	2805200			33960	11946	22476	22486	38723	38723					0.09042343439477918
LRGCICLSLAV	11	Unmodified	_LRGCICLSLAV_					0	0	0		ENST00000564968.1_1_16:1507514-1509320:-|nuORF;ENST00000563822.1_1_16:1505719-1509320:-|nuORF	ENST00000564968.1_1_16:1507514-1509320:-|nuORF	ENST00000564968.1_1_16:1507514-1509320:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.319580078125	2	574.319937	1146.62532	0.59155	0.00033974	-1.3409	-0.00077012	-0.74936	-0.00043037	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.69995	1	9691	9691		31.53	4.8369	1	1777600			33961	13900	22477	22487	38724	38724					0.05787278170259924
LRGDPGLRG	9	Unmodified	_LRGDPGLRG_					0	0	0		ENSG00000090581|ENST00000204679|GNPTG;ENST00000527168.5_1_16:1412406-1413089:+|nuORF;ENST00000527076.1_1_16:1412572-1413089:+|nuORF	ENSG00000090581|ENST00000204679|GNPTG	ENSG00000090581|ENST00000204679|GNPTG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76904296875	2	470.769783	939.525013	-1.6346	-0.00076952	0.1281	6.0304E-05	-1.5065	-0.00070922	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.29259	1	4053	4053		65.465	12.529	1	1359900			33962	1650	22478	22488	38725	38725					0.052831252231385406
LRGDPGLRG	9	Unmodified	_LRGDPGLRG_					0	0	0		ENSG00000090581|ENST00000204679|GNPTG;ENST00000527168.5_1_16:1412406-1413089:+|nuORF;ENST00000527076.1_1_16:1412572-1413089:+|nuORF	ENSG00000090581|ENST00000204679|GNPTG	ENSG00000090581|ENST00000204679|GNPTG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7688293457031	2	470.769783	939.525013	-1.6002	-0.00075333	-0.071841	-3.3821E-05	-1.6721	-0.00078715	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.24527	2	4369	4369;4401		69.628	9.5094	1	1490800			33963	1650	22478	22488	38726;38727	38726					0.052831252231385406
LRGDPGLRG	9	Unmodified	_LRGDPGLRG_					0	0	0		ENSG00000090581|ENST00000204679|GNPTG;ENST00000527168.5_1_16:1412406-1413089:+|nuORF;ENST00000527076.1_1_16:1412572-1413089:+|nuORF	ENSG00000090581|ENST00000204679|GNPTG	ENSG00000090581|ENST00000204679|GNPTG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7691345214844	2	470.769783	939.525013	-1.5754	-0.00074164	0.39518	0.00018604	-1.1802	-0.0005556	470.7698262584641	54.969	1.6886	54.969	54.144	55.833	0					124	54	3	0	0	0	0.51592	1	4595	4595		51.193	1.7511	1	1398900			33964	1650	22478	22488	38728	38728					0.052831252231385406
LRGDPGLRG	9	Unmodified	_LRGDPGLRG_					0	0	0		ENSG00000090581|ENST00000204679|GNPTG;ENST00000527168.5_1_16:1412406-1413089:+|nuORF;ENST00000527076.1_1_16:1412572-1413089:+|nuORF	ENSG00000090581|ENST00000204679|GNPTG	ENSG00000090581|ENST00000204679|GNPTG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.76885986328125	2	470.769783	939.525013	-0.039118	-1.8416E-05	-1.6086	-0.0007573	-1.6478	-0.00077572	470.76888428229023	53.107	1.8265	53.104	52.614	54.44	-0.0033035					119	53	3	0	0	0	0.33718	1	4636	4636		62.107	3.8775	1	1606400			33965	1650	22478	22488	38729	38729					0.052831252231385406
LRGDPGLRG	9	Unmodified	_LRGDPGLRG_					0	0	0		ENSG00000090581|ENST00000204679|GNPTG;ENST00000527168.5_1_16:1412406-1413089:+|nuORF;ENST00000527076.1_1_16:1412572-1413089:+|nuORF	ENSG00000090581|ENST00000204679|GNPTG	ENSG00000090581|ENST00000204679|GNPTG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.768798828125	2	470.769783	939.525013	-0.63239	-0.00029771	-1.0756	-0.00050635	-1.708	-0.00080406	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.41984	1	4747	4747		56.434	5.2411	1	1468500			33966	1650	22478	22488	38730	38730					0.052831252231385406
LRGDPGLRG	9	Unmodified	_LRGDPGLRG_					0	0	0		ENSG00000090581|ENST00000204679|GNPTG;ENST00000527168.5_1_16:1412406-1413089:+|nuORF;ENST00000527076.1_1_16:1412572-1413089:+|nuORF	ENSG00000090581|ENST00000204679|GNPTG	ENSG00000090581|ENST00000204679|GNPTG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.76873779296875	2	470.769783	939.525013	-1.0221	-0.00048115	-0.40497	-0.00019065	-1.427	-0.0006718	470.76946116999153	50.688	1.1627	50.718	50.343	51.506	0.029629					82	35	3	0	0	0	0.51592	1	4000	4000		51.193	1.6567	1	1717600			33967	1650	22478	22488	38731	38731					0.052831252231385406
LRGDRVFAR	9	Unmodified	_LRGDRVFAR_					0	0	0		ENSG00000181751|ENST00000319933|MACIR	ENSG00000181751|ENST00000319933|MACIR	ENSG00000181751|ENST00000319933|MACIR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3170166015625	2	545.317432	1088.62031	0.65018	0.00035456	-2.1499	-0.0011724	-1.4998	-0.00081784	545.316213260096	93.135	0.92345	93.576	93.271	94.194	0.44099					56	21	3	0	0	0	0.75725	1	11095	11095		36.447	2.5251	1	496970			33968	7402	22479	22489	38732	38732					0.07954478414171717
LRGFGARV	8	Unmodified	_LRGFGARV_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2632141113281	2	438.264136	874.51372	-1.9277	-0.00084486	0.24503	0.00010739	-1.6827	-0.00073747	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.884	1	2198	2198		33.516	6.7195	1	3507500			33969	1943	22480	22490	38733	38733					0.07144347919654592
LRGFGARV	8	Unmodified	_LRGFGARV_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26336669921875	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.92457	1	2546	2546		47.916	5.4411	1	3673500			33970	1943	22480	22490	38734	38734					0.07144347919654592
LRGFGARV	8	Unmodified	_LRGFGARV_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633361816406	2	438.264136	874.51372	-1.0936	-0.00047928	-0.34853	-0.00015275	-1.4421	-0.00063203	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.87922	2	2662	2578;2662		38.806	5.1588	1	2862500			33971	1943	22480	22490	38735;38736	38736					0.07144347919654592
LRGFGARV	8	Unmodified	_LRGFGARV_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26336669921875	2	438.264136	874.51372	-1.2142	-0.00053214	-0.86056	-0.00037715	-2.0748	-0.00090929	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.884	1	3383	3383		33.516	1.9858	1	4828000			33972	1943	22480	22490	38737	38737					0.07144347919654592
LRGFGARV	8	Unmodified	_LRGFGARV_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26300048828125	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.884	1	3167	3167		33.516	0	1	4268300			33973	1943	22480	22490	38738	38738					0.07144347919654592
LRGFGARV	8	Unmodified	_LRGFGARV_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2630310058594	2	438.264136	874.51372	-1.5833	-0.00069392	-0.15448	-6.7702E-05	-1.7378	-0.00076162	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.84341	2	2152	2074;2152		50.025	7.5501	1	11160000			33974	1943	22480	22490	38739;38740	38740					0.07144347919654592
LRGFGARV	8	Unmodified	_LRGFGARV_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2619934082031	2	438.264136	874.51372	0.15263	6.689E-05	-1.9074	-0.00083592	-1.7547	-0.00076903	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.85277	1	2114	2114		25.45	2.4077	1	11370000			33975	1943	22480	22490	38741	38741					0.07144347919654592
LRGFGARV	8	Unmodified	_LRGFGARV_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2633972167969	2	438.264136	874.51372	0.037237	1.632E-05	-1.83	-0.00080201	-1.7927	-0.00078569	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.90465	1	1941	1941		40.573	1.3198	1	10667000			33976	1943	22480	22490	38742	38742					0.07144347919654592
LRGFGARV	8	Unmodified	_LRGFGARV_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2640075683594	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.85277	1	2867	2867		25.45	3.4903	1	21381000			33977	1943	22480	22490	38743	38743					0.07144347919654592
LRGFLGHIL	9	Unmodified	_LRGFLGHIL_					0	0	0		ENST00000356341.7_2_11:77033479-77033593:-|nuORF	ENST00000356341.7_2_11:77033479-77033593:-|nuORF	ENST00000356341.7_2_11:77033479-77033593:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3158569335938	2	513.316369	1024.61818	-1.5202	-0.00078036	1.7283	0.00088716	0.20804	0.00010679	513.3171098240366	43.168	1.3566	43.168	42.754	44.111	0					83	32	4	0	0	0	0.7932	1	3091	3091		26.796	7.4361	1	698430			33978	10366	22481	22491	38744	38744					0.10686049676360199
LRGGAHAGT	9	Unmodified	_LRGGAHAGT_					0	0	0			REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2259826660156	2	420.227751	838.440949	-1.3512	-0.00056782	1.4844	0.0006238	0.13321	5.5978E-05	420.2282629742312	76.938	2.2039	76.938	74.958	77.162	0					134	85	2	0	0	0	0.76255	1	7028	7028		35.618	0.41757	1	154140	+		33979	24662	22482	22492	38745	38745					0.015265941262214255
LRGGAHAGT	9	Unmodified	_LRGGAHAGT_					0	0	0			REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2276916503906	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.55097	8	7288	7245;7288;7296;7310;7372;7387;7395;7437		49.442	10.441	1	419890	+		33980	24662	22482	22492	38746;38747;38748;38749;38750;38751;38752;38753	38747					0.015265941262214255
LRGGAHAGT	9	Unmodified	_LRGGAHAGT_					0	0	0			REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2261962890625	2	420.227751	838.440949	-0.18786	-7.8944E-05	0.38594	0.00016218	0.19808	8.324E-05	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.76764	2	7321	7321;7358		34.173	2.2177	1	279000	+		33981	24662	22482	22492	38754;38755	38754					0.015265941262214255
LRGGAHAGT	9	Unmodified	_LRGGAHAGT_					0	0	0			REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2276306152344	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.33718	8	7656	7656;7679;7790;7808;7816;7842;7936;7992		62.107	12.083	1	743780	+		33982	24662	22482	22492	38756;38757;38758;38759;38760;38761;38762;38763	38756					0.015265941262214255
LRGGAHAGT	9	Unmodified	_LRGGAHAGT_					0	0	0			REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.22747802734375	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.55097	14	7925	7760;7776;7785;7925;7934;7963;7983;8003;8028;8035;8050;8058;8104;8118		49.442	12.282	1	888480	+		33983	24662	22482	22492	38764;38765;38766;38767;38768;38769;38770;38771;38772;38773;38774;38775;38776;38777	38767					0.015265941262214255
LRGGAHAGT	9	Unmodified	_LRGGAHAGT_					0	0	0			REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2274475097656	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.35373	12	7785	7635;7698;7734;7745;7755;7785;7801;7810;7821;7858;7867;7979		60.972	16.441	1	961790	+		33984	24662	22482	22492	38778;38779;38780;38781;38782;38783;38784;38785;38786;38787;38788;38789	38783					0.015265941262214255
LRGGAHAGT	9	Unmodified	_LRGGAHAGT_					0	0	0			REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2273254394531	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.64922	12	7473	7328;7336;7365;7372;7425;7445;7455;7473;7502;7605;7612;7749		44.117	8.8806	1	831720	+		33985	24662	22482	22492	38790;38791;38792;38793;38794;38795;38796;38797;38798;38799;38800;38801	38797					0.015265941262214255
LRGGAHAGT	9	Unmodified	_LRGGAHAGT_					0	0	0			REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2275085449219	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.47272	15	7591	7384;7427;7456;7464;7475;7494;7530;7540;7568;7583;7591;7608;7632;7665;7696		53.351	12.779	1	678130	+		33986	24662	22482	22492	38802;38803;38804;38805;38806;38807;38808;38809;38810;38811;38812;38813;38814;38815;38816	38812					0.015265941262214255
LRGGAHAGT	9	Unmodified	_LRGGAHAGT_					0	0	0			REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2276611328125	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.64922	8	7435	7311;7380;7402;7411;7435;7464;7547;7554		44.117	10.441	1	634680	+		33987	24662	22482	22492	38817;38818;38819;38820;38821;38822;38823;38824	38821					0.015265941262214255
LRGGAHAGT	9	Unmodified	_LRGGAHAGT_					0	0	0			REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.227783203125	2	420.227751	838.440949	0.39025	0.000164	-0.22921	-9.6321E-05	0.16104	6.7675E-05	420.2275761359418	78.73	4.4768	79.141	77.509	81.986	0.4106					178	106	2	0	0	0	0.64922	2	9150	9059;9150		44.117	3.5442	1	423290	+		33988	24662	22482	22492	38825;38826	38826					0.015265941262214255
LRGGAHAGT	9	Unmodified	_LRGGAHAGT_					0	0	0			REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	REV__ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.227294921875	2	420.227751	838.440949	0.042435	1.7832E-05	0.092754	3.8978E-05	0.13519	5.681E-05	420.2277069932212	78.969	5.8282	79.518	76.332	82.16	0.54945					273	145	3	0	0	0	0.74721	2	9146	8966;9146		37.159	3.6634	1	581780	+		33989	24662	22482	22492	38827;38828	38828					0.015265941262214255
LRGGGRPV	8	Unmodified	_LRGGGRPV_					0	0	0			REV__ENSG00000170748|ENST00000306904|RBMXL2	REV__ENSG00000170748|ENST00000306904|RBMXL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24847412109375	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.85277	1	9228	9228		25.45	0	1	56664000	+		33990	21684	22483	22493	38829	38829					0.06959774885558545
LRGGGRPV	8	Unmodified	_LRGGGRPV_					0	0	0			REV__ENSG00000170748|ENST00000306904|RBMXL2	REV__ENSG00000170748|ENST00000306904|RBMXL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.248046875	2	406.248486	810.48242	3.1803	0.001292	-2.4584	-0.00099873	0.7219	0.00029327	406.2473607643489	90.704	2.3213	90.75	90.262	92.583	0.046448					123	55	3	0	0	0	0.81548	1	9363	9363		20.482	1.1219	1	1081600	+		33991	21684	22483	22493	38830	38830					0.06959774885558545
LRGGPRLS	8	Unmodified	_LRGGPRLS_					0	0	0		ENST00000483783.1_1_9:140005102-140007040:-|nuORF;ENSG00000176978|ENST00000371579|DPP7	ENST00000483783.1_1_9:140005102-140007040:-|nuORF	ENST00000483783.1_1_9:140005102-140007040:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.26153564453125	2	428.261594	854.508634	0.64465	0.00027608	-0.51085	-0.00021878	0.1338	5.7301E-05	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.87479	1	9261	9261		30.504	0	1	40631000			33992	7110	22484	22494	38831	38831					0.07556044057025701
LRGGRGLGVQ	10	Unmodified	_LRGGRGLGVQ_					0	0	0			REV__ENST00000392701.7_1_2:166650648-166650972:-|nuORF	REV__ENST00000392701.7_1_2:166650648-166650972:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.3025817871094	2	506.804157	1011.59376	-1.4111	-0.00071517	-4.367	-0.0022132	-5.7781	-0.0029284	506.8018835594655	53.182	1.0826	53.182	52.473	53.556	0					55	30	2	0	0	0	0.86348	1	4373	4373		31.53	4.8369	1	130290	+		33993	26028	22485	22495	38832	38832					0.08842789522861949
LRGGRGLGVQ	10	Unmodified	_LRGGRGLGVQ_					0	0	0			REV__ENST00000392701.7_1_2:166650648-166650972:-|nuORF	REV__ENST00000392701.7_1_2:166650648-166650972:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.3025817871094	2	506.804157	1011.59376	-1.4111	-0.00071517	-4.367	-0.0022132	-5.7781	-0.0029284	506.8018835594655	53.182	1.0826	53.182	52.473	53.556	0					55	30	2	0	0	0	0.37624	1	4373	4373		31.53	6.0796	1	130290	+		33994	26028	22485	22495	38833	38833					0.08842789522861949
LRGGSALVEGT	11	Unmodified	_LRGGSALVEGT_					0	0	0			REV__ENST00000567884.5_2_16:90015852-90019061:+|nuORF	REV__ENST00000567884.5_2_16:90015852-90019061:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2936401367188	2	530.293288	1058.57202	-0.066725	-3.5384E-05	0.20402	0.00010819	0.1373	7.2808E-05	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.65746	1	9151	9151		37.812	0.65241	1	2084800	+		33995	28888	22486	22496	38834	38834					0.04507939983614051
LRGGSALVEGT	11	Unmodified	_LRGGSALVEGT_					0	0	0			REV__ENST00000567884.5_2_16:90015852-90019061:+|nuORF	REV__ENST00000567884.5_2_16:90015852-90019061:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2927856445312	2	530.293288	1058.57202	0.74166	0.0003933	-0.55232	-0.00029289	0.18935	0.00010041	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.66929	1	9172	9172		36.447	4.9169	1	2081200	+		33996	28888	22486	22496	38835	38835					0.04507939983614051
LRGGSCGR	8	Unmodified	_LRGGSCGR_					0	0	0		ENST00000452236.2_1_6:28554764-28555010:-|nuORF	ENST00000452236.2_1_6:28554764-28555010:-|nuORF	ENST00000452236.2_1_6:28554764-28555010:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2090759277344	2	403.208504	804.402455	0.85516	0.00034481	0.40187	0.00016204	1.257	0.00050685	403.2085877273137	85.891	2.1457	85.817	85.277	87.423	-0.073761					115	49	4	0	0	0	0.90523	1	8843	8843		40.778	0	1	1526100			33997	11915	22487	22497	38836	38836					-0.007570347799401134
LRGGTPRR	8	Unmodified	_LRGGTPRR_					0	0	0			REV__ENSG00000132024|ENST00000318003|CC2D1A	REV__ENSG00000132024|ENST00000318003|CC2D1A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7912292480469	2	456.777942	911.541332	-2.1157	-0.00096641	-3.318	-0.0015156	-5.4338	-0.002482	456.77575828040136	39.949	0.52734	40.316	39.983	40.511	0.36797					16	12	2	0	0	0	0.4196	1	3405	3405		34.173	18.531	1	102540	+		33998	18982	22488	22498	38837	38837					0.08202251179886844
LRGGVPTR	8	Unmodified	_LRGGVPTR_					0	0	0		ENST00000608703.1_1_6:31783412-31784126:+|nuORF;ENST00000375651.6_1_6:31783412-31783736:+|nuORF;ENST00000375650.4_1_6:31795525-31795930:+|nuORF	ENST00000608703.1_1_6:31783412-31784126:+|nuORF	ENST00000608703.1_1_6:31783412-31784126:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.26153564453125	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.87479	1	9485	9485		30.504	6.3009	1	55300000			33999	10802	22489	22499	38838	38838					0.0755604405703707
LRGHLSSN	8	Unmodified	_LRGHLSSN_					0	0	0		ENST00000423469.6_1_8:144919671-144920039:-|nuORF	ENST00000423469.6_1_8:144919671-144920039:-|nuORF	ENST00000423469.6_1_8:144919671-144920039:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2406921386719	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.88185	1	8423	8423		32.812	2.3088	1	1238700			34000	11499	22490	22500	38839	38839					0.021228632977113193
LRGHPFLRRN	10	Unmodified	_LRGHPFLRRN_					0	0	0		nc|ENSG00000129673|Q16613-2|AANAT;ENSG00000129673|ENST00000392492|AANAT	nc|ENSG00000129673|Q16613-2|AANAT	nc|ENSG00000129673|Q16613-2|AANAT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3688354492188	2	633.37053	1264.72651	1.4972	0.00094828	-3.5496	-0.0022482	-2.0524	-0.0013	633.3681812370636	95.449	2.3087	95.87	94.551	96.859	0.42051					197	55	4	0	0	0	0.86218	1	11291	11291		32.812	4.7309	1	3612700			34001	14902	22491	22501	38840	38840					0.10473233979519136
LRGIDKKHGAL	11	Unmodified	_LRGIDKKHGAL_					0	0	0			REV__ENSG00000198759|ENST00000361306|EGFL6	REV__ENSG00000198759|ENST00000361306|EGFL6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3671875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.7434	1	12266	12266		23.523	0	1	3346600	+		34002	23376	22492	22502	38841	38841					0.12459876308275852
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.7932	1	8455	8455		26.693	1.1189	1	9288900			34003	10134	22493	22503	38842	38842					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.303655	1044.59276	-0.041393	-2.1661E-05	-0.20594	-0.00010777	-0.24734	-0.00012943	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.77244	1	8853	8853		32.812	0	1	3850300			34004	10134	22493	22503	38843	38843					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.303655	1044.59276	-0.041206	-2.1563E-05	-0.13765	-7.2034E-05	-0.17886	-9.3597E-05	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.78983	1	9069	9069		27.882	0	1	12431000			34005	10134	22493	22503	38844	38844					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303466796875	2	523.303655	1044.59276	-0.041135	-2.1526E-05	0.095535	4.9994E-05	0.054401	2.8468E-05	523.30361738985	91.645	2.4487	91.714	91.431	93.88	0.06987					99	57	2	0	0	0	0.76255	1	9450	9450		35.618	2.1027	1	1067500			34006	10134	22493	22503	38845	38845					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3042602539062	2	523.303655	1044.59276	1.4247	0.00074556	-1.721	-0.00090062	-0.29632	-0.00015507	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.71772	3	8813	8756;8790;8813		39.253	6.4404	1	3882100			34007	10134	22493	22503	38846;38847;38848	38848					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3033447265625	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.67345	1	9654	9654		42.396	14.514	1	13080000			34008	10134	22493	22503	38849	38849					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.30322265625	2	523.303655	1044.59276	-0.1734	-9.0741E-05	-0.15994	-8.3699E-05	-0.33334	-0.00017444	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.78983	1	8908	8908		27.882	2.3082	1	13808000			34009	10134	22493	22503	38850	38850					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3037109375	2	523.303655	1044.59276	-0.17027	-8.9103E-05	0.13508	7.0686E-05	-0.035194	-1.8417E-05	523.3036223327587	91.376	2.6869	91.596	91.26	93.946	0.22013					111	63	2	0	0	0	0.76764	1	9192	9192		34.173	1.3601	1	1188800			34010	10134	22493	22503	38851	38851					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3040161132812	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.58668	1	9207	9207		47.657	5.2612	1	13442000			34011	10134	22493	22503	38852	38852					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3057861328125	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.77244	1	8319	8319		32.812	1.2335	1	3566700			34012	10134	22493	22503	38853	38853					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3038940429688	2	523.303655	1044.59276	-1.5391	-0.00080541	1.6494	0.00086314	0.11031	5.7726E-05	523.3043931360254	91.382	2.3991	91.563	91.237	93.636	0.18029					145	56	4	0	0	0	0.71772	1	9150	9150		39.253	2.0937	1	1040100			34013	10134	22493	22503	38854	38854					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3035888671875	2	523.303655	1044.59276	0.60955	0.00031898	-0.6954	-0.00036391	-0.085851	-4.4926E-05	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.44421	1	10225	10225		54.776	5.3348	1	4023800			34014	10134	22493	22503	38855	38855					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3030395507812	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.76764	3	10737	10249;10737;10749		34.173	5.023	1	11944000			34015	10134	22493	22503	38856;38857;38858	38857					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3034057617188	2	523.303655	1044.59276	-0.50611	-0.00026485	0.28637	0.00014986	-0.21974	-0.00011499	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.76419	2	10015	10015;10253		35.152	2.3396	1	3970100			34016	10134	22493	22503	38859;38860	38859					0.07224530363282611
LRGIKQETT	9	Unmodified	_LRGIKQETT_					0	0	0		ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	ENST00000333055.8_1_5:180218346-180218421:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3031005859375	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.55097	5	10510	10462;10486;10510;10668;10753		49.442	6.6056	1	13160000			34017	10134	22493	22503	38861;38862;38863;38864;38865	38863					0.07224530363282611
LRGILQLDEPR	11	Unmodified	_LRGILQLDEPR_					0	0	0			REV__ENSG00000047662|ENST00000265018|FAM184B	REV__ENSG00000047662|ENST00000265018|FAM184B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.257568359375	3	437.257738	1308.75138	0.72446	0.00031677	-1.611	-0.00070442	-0.88654	-0.00038765	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.69071	1	10346	10346		33.039	0	1	670840	+		34018	16359	22494	22504	38866	38866					0.10935824271518868
LRGKGLLL	8	Unmodified	_LRGKGLLL_					0	0	0		ENST00000358738.3_1_14:64989177-64989240:+|nuORF	ENST00000358738.3_1_14:64989177-64989240:+|nuORF	ENST00000358738.3_1_14:64989177-64989240:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2513122558594	2	435.300188	868.585822	0.21722	9.4554E-05	-0.852	-0.00037087	-0.63478	-0.00027632	435.29982380201983	78.797	0.63546	79.36	79.079	79.714	0.56332					20	14	2	0	0	0	0.4196	1	9058	9058		25.45	4.9683	1	75871			34019	10415	22495	22505	38867	38867					0.14627262273381803
LRGKLTQET	9	Unmodified	_LRGKLTQET_					0	0	0			REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3031005859375	2	523.303655	1044.59276	2.4529	0.0012836	-2.2653	-0.0011855	0.18755	9.8148E-05	523.3023390872137	100.93	0.87259	101.28	100.69	101.57	0.34591					58	22	4	0	0	0	0.7932	1	12262	12262		25.574	0.12388	1	1240700	+		34020	16706	22496	22506	38868	38868					0.07224530363282611
LRGKTRSL	8	Unmodified	_LRGKTRSL_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.6080017089844	2	465.795801	929.577048	2.6542	0.0012363	-2.1194	-0.00098722	0.53475	0.00024909	465.7948950176695	101.12	0.60817	101.07	100.79	101.4	-0.052116					22	14	2	0	0	0	0.4196	1	10981	10981		20.947	10.682	1	92679			34021	8822	22497	22507	38869	38869					0.10944288636892452
LRGKTRSL	8	Unmodified	_LRGKTRSL_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	465.795801	929.577048	-1.0041	-0.00046771	2.431	0.0011323	1.4269	0.00066464	465.79717739786275	101.11	0.55927	101.31	100.84	101.4	0.2058	0.12259	0.003418	NaN	20.947	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115360			34022	8822	22497	22507							0.10944288636892452
LRGKWLAL	8	Unmodified	_LRGKWLAL_					0	0	0			REV__ENST00000457348.5_1_1:203273991-203274369:-|nuORF	REV__ENST00000457348.5_1_1:203273991-203274369:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8062438964844	2	478.805637	955.596721	0.18646	8.928E-05	0.43935	0.00021037	0.62582	0.00029964	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.81548	1	2723	2723		20.482	1.1219	1	371600	+		34023	26967	22498	22508	38870	38870					0.11714664647638529
LRGLDAHLE	9	Unmodified	_LRGLDAHLE_					0	0	0		nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;ENSG00000070182|ENST00000644917|SPTB	nc|ENSG00000070182|P11277-3|SPTB	nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2811889648438	2	512.282723	1022.55089	-0.88857	-0.0004552	-1.7897	-0.00091686	-2.6783	-0.0013721	512.2817341917631	86.454	3.0125	86.454	85.618	88.63	0					129	69	2	0	0	0	0.78058	1	8386	8386		30.504	1.3541	1	265310			34024	1234	22499	22509	38871	38871					0.040519746747463614
LRGLLTLLLP	10	Unmodified	_LRGLLTLLLP_					0	0	0		ENST00000548845.5_1_12:53693515-53693821:+|nuORF;ENST00000551670.1_1_12:53693536-53696986:+|nuORF;nc|ENSG00000139637|Q9HB07|MYG1;ENSG00000139637|ENST00000267103|MYG1	ENST00000548845.5_1_12:53693515-53693821:+|nuORF	ENST00000548845.5_1_12:53693515-53693821:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.8761596679688	2	554.876259	1107.73797	-0.39963	-0.00022175	0.43239	0.00023992	0.032756	1.8176E-05	554.8762058522698	53.649	0.83599	54.234	53.872	54.708	0.58474					39	19	3	0	0	0	0.46422	1	5452	5452		58.782	7.5893	1	489110			34025	13625	22500	22510	38872	38872					0.18840618230296968
LRGLRRTMS	9	Unmodified	_LRGLRRTMS_					0	0	0		ENST00000559630.1_1_15:49097750-49103222:-|nuORF;ENST00000559444.1_1_15:49090143-49103222:-|nuORF	ENST00000559630.1_1_15:49097750-49103222:-|nuORF	ENST00000559630.1_1_15:49097750-49103222:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3167114257812	2	545.319117	1088.62368	-0.0069207	-3.774E-06	-4.2835	-0.0023359	-4.2904	-0.0023396	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.41566	1	10495	10495		56.721	10.264	1	4868200			34026	13808	22501	22511	38873	38873					0.08291405196519008
LRGLRTLL	8	Unmodified	_LRGLRTLL_					0	0	0		ENSG00000163428|ENST00000295628|LRRC58	ENSG00000163428|ENST00000295628|LRRC58	ENSG00000163428|ENST00000295628|LRRC58	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2690734863281	2	471.316369	940.618185	-0.78923	-0.00037198	1.8301	0.00086257	1.0409	0.00049059	471.3171233960732	62.711	0.82305	63.099	62.752	63.575	0.38779					38	18	3	0	0	0	0.4196	1	6678	6678		30.504	0	1	145140			34027	5796	22502	22512	38874	38874					0.14550049676358867
LRGNIRGRGT	10	Unmodified	_LRGNIRGRGT_					0	0	0			REV__nc|ENSG00000114054|P05166-2|PCCB	REV__nc|ENSG00000114054|P05166-2|PCCB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.3282470703125	2	550.325788	1098.63702	0.84562	0.00046537	1.7269	0.00095037	2.5726	0.0014157	550.3267482489723	100.06	1.2234	100.21	99.636	100.86	0.15073					67	27	3	0	0	0	0.86763	1	10463	10463		26.693	0	1	401350	+		34028	18027	22503	22513	38875	38875					0.09164979300135201
LRGNLRFFTG	10	Unmodified	_LRGNLRFFTG_					0	0	0		ENST00000380871.4_1_8:23538560-23538767:-|nuORF	ENST00000380871.4_1_8:23538560-23538767:-|nuORF	ENST00000380871.4_1_8:23538560-23538767:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8665771484375	2	590.832914	1179.65128	3.3783	0.001996	-2.6885	-0.0015884	0.68981	0.00040756	590.831349675624	103.51	0.39926	103.47	103.2	103.6	-0.043755					20	9	3	0	0	0	0.37624	1	11312	11312		54.776	3.4409	1	311780			34029	10936	22504	22514	38876	38876					0.06863631728401742
LRGPATLVPVW	11	Unmodified	_LRGPATLVPVW_					0	0	0		ENST00000608788.5_1_X:62652333-62780718:-|nuORF	ENST00000608788.5_1_X:62652333-62780718:-|nuORF	ENST00000608788.5_1_X:62652333-62780718:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5746765136719	3	403.576519	1207.70773	-1.8261	-0.00073697	-2.4452	-0.00098683	-4.2713	-0.0017238	403.5754952513638	81.706	0.84529	81.851	81.446	82.291	0.14513					69	19	4	0	0	0	0.68378	1	7877	7877		29.551	6.1728	1	2366000			34030	14478	22505	22515	38877	38877					0.11218259565089284
LRGPLPPIA	9	Unmodified	_LRGPLPPIA_					0	0	0			REV__ENST00000394790.2_1_10:75532144-75533060:+|nuORF	REV__ENST00000394790.2_1_10:75532144-75533060:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.7977600097656	2	467.297645	932.580737	-0.27834	-0.00013007	3.1829	0.0014873	2.9045	0.0013573	467.2990099140646	19.831	1.0472	19.201	18.937	19.984	-0.62961					38	22	3	0	0	0	0.20789	1	621	621		38.806	6.8513	1	820180	+		34031	26090	22506	22516	38878	38878					0.11174958410754243
LRGPNSVRLIN	11	Unmodified	_LRGPNSVRLIN_					0	0	0			REV__nc|ENSG00000116717|P24522-2|GADD45A	REV__nc|ENSG00000116717|P24522-2|GADD45A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8694458007812	2	619.870028	1237.7255	-1.2246	-0.00075909	0.27155	0.00016833	-0.95304	-0.00059076	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.72106	1	9849	9849		28.081	5.5018	1	6224400	+		34032	18218	22507	22517	38879	38879					0.11614974819940471
LRGPQVDVK	9	Unmodified	_LRGPQVDVK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3013610839844	2	506.300916	1010.58728	-0.41166	-0.00020842	0.75262	0.00038105	0.34097	0.00017263	506.3013167893661	96.275	1.2816	96.506	95.928	97.21	0.23103					78	29	3	0	0	0	0.43338	1	9925	9925		55.504	18.345	1	550160			34033	3371	22508	22518	38880	38880					0.0824085157147465
LRGPQVDVK	9	Unmodified	_LRGPQVDVK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	506.300916	1010.58728	1.2973	0.00065684	-0.91425	-0.00046289	0.38308	0.00019395	506.3005247806999	96.104	1.1628	96.525	96.072	97.234	0.42051	-0.044396	-0.00079483	NaN	55.504	57	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	321930			34034	3371	22508	22518							0.0824085157147465
LRGPQVDVK	9	Unmodified	_LRGPQVDVK_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	506.300916	1010.58728	1.5379	0.00077862	-2.7079	-0.001371	-1.17	-0.00059237	506.2990603441839	96.237	1.6845	96.641	96.175	97.859	0.40451	0.072261	-0.002611	NaN	55.504	60	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	350940			34035	3371	22508	22518							0.0824085157147465
LRGPRAAA	8	Unmodified	_LRGPRAAA_					0	0	0			REV__ENST00000400780.8_1_8:145515294-145515378:+|nuORF	REV__ENST00000400780.8_1_8:145515294-145515378:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2471618652344	2	406.248486	810.48242	3.144	0.0012772	-2.6463	-0.0010751	0.49768	0.00020218	406.2473237922933	114.03	1.1173	114.05	113.12	114.24	0.020027					74	50	2	0	0	0	0.82464	1	13750	13750		21.702	0	1	65995	+		34036	26253	22509	22519	38881	38881					0.06959774885547176
LRGPRPGSLT	10	Unmodified	_LRGPRPGSLT_					0	0	0		nc|ENSG00000100593|Q6H9L7-4|ISM2;nc|ENSG00000100593|Q6H9L7-2|ISM2;nc|ENSG00000100593|Q6H9L7-5|ISM2;nc|ENSG00000100593|Q6H9L7-3|ISM2;ENSG00000100593|ENST00000342219|ISM2	nc|ENSG00000100593|Q6H9L7-4|ISM2	nc|ENSG00000100593|Q6H9L7-4|ISM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3109741210938	2	527.311815	1052.60908	0.29221	0.00015408	-1.3979	-0.00073715	-1.1057	-0.00058307	527.3109426709796	80.891	0.85687	81.312	80.891	81.748	0.4215					62	20	4	0	0	0	0.77314	1	9309	9309		40.778	2.9666	1	2260400			34037	1852	22510	22520	38882	38882					0.08487656320039605
LRGRLRRITEN	11	Unmodified	_LRGRLRRITEN_					0	0	0		nc|nan|Q6P1S2-2|C3orf33;ENSG00000174928|ENST00000340171|C3orf33	nc|nan|Q6P1S2-2|C3orf33	nc|nan|Q6P1S2-2|C3orf33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.9482727050781	3	461.947898	1382.82186	-1.7389	-0.00080327	2.634	0.0012168	0.89514	0.00041351	461.9490263152489	105	1.7163	105.1	104.71	106.42	0.091553					125	42	4	0	0	0	0.75906	1	11103	11103		20.03	1.4994	1	985240			34038	6972	22511	22521	38883	38883					0.14576542379904822
LRGRPLLRWS	10	Unmodified	_LRGRPLLRWS_					0	0	0			REV__ENST00000403000.6_1_8:145689231-145689483:-|nuORF	REV__ENST00000403000.6_1_8:145689231-145689483:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3828125	2	627.383106	1252.75166	0.92716	0.00058169	-2.2931	-0.0014387	-1.366	-0.00085698	627.3814833817243	111.89	0.64575	111.96	111.47	112.12	0.069542					69	19	4	0	0	0	0.80179	1	12058	12058		39.253	2.8061	1	15643000	+		34039	26271	22512	22522	38884	38884					0.13539288782089898
LRGRPLLRWS	10	Unmodified	_LRGRPLLRWS_					0	0	0			REV__ENST00000403000.6_1_8:145689231-145689483:-|nuORF	REV__ENST00000403000.6_1_8:145689231-145689483:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.8834838867188	2	627.383106	1252.75166	-1.2002	-0.00075297	0.22888	0.00014359	-0.9713	-0.00060938	627.3830835136717	111.36	0.55814	111.34	111.22	111.78	-0.019882					41	20	3	0	0	0	0.8608	1	11866	11866		34.173	8.5985	1	7923200	+		34040	26271	22512	22522	38885	38885					0.13539288782089898
LRGRPLLRWS	10	Unmodified	_LRGRPLLRWS_					0	0	0			REV__ENST00000403000.6_1_8:145689231-145689483:-|nuORF	REV__ENST00000403000.6_1_8:145689231-145689483:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.38330078125	2	627.383106	1252.75166	2.3057	0.0014465	-3.5574	-0.0022319	-1.2517	-0.00078532	627.3805851033305	111.94	0.21839	111.98	111.85	112.07	0.04184					23	6	4	0	0	0	0.86587	1	13529	13529		29.17	3.596	1	1122300	+		34041	26271	22512	22522	38886	38886					0.13539288782089898
LRGSALGRP	9	Unmodified	_LRGSALGRP_					0	0	0			REV__nc|ENSG00000186493|Q86SI9-2|IRX2-DT	REV__nc|ENSG00000186493|Q86SI9-2|IRX2-DT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.7792053222656	2	463.780151	925.545748	0.21789	0.00010105	-2.3997	-0.0011129	-2.1818	-0.0010119	463.77880355938623	39.71	0.82539	39.799	39.611	40.437	0.088375					41	22	3	0	0	0	0.78536	1	2471	2471		29.15	1.2673	1	314080	+		34042	30108	22513	22523	38887	38887					0.07999715602795732
LRGSIRPT	8	Unmodified	_LRGSIRPT_					0	0	0			REV__ENST00000487659.1_1_1:1341772-1341910:-|nuORF	REV__ENST00000487659.1_1_1:1341772-1341910:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27447509765625	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.88601	2	9747	9616;9747		45.952	8.7928	1	47650000	+		34043	27578	22514	22524	38888;38889	38889					0.08152313228526964
LRGSIRPT	8	Unmodified	_LRGSIRPT_					0	0	0			REV__ENST00000487659.1_1_1:1341772-1341910:-|nuORF	REV__ENST00000487659.1_1_1:1341772-1341910:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2738037109375	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.87479	1	10027	10027		30.504	3.7075	1	51698000	+		34044	27578	22514	22524	38890	38890					0.08152313228526964
LRGSIRPT	8	Unmodified	_LRGSIRPT_					0	0	0			REV__ENST00000487659.1_1_1:1341772-1341910:-|nuORF	REV__ENST00000487659.1_1_1:1341772-1341910:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2745666503906	2	450.274701	898.534849	0.49619	0.00022342	-0.76811	-0.00034586	-0.27192	-0.00012244	450.2742908789494	92.742	1.9986	93.189	92.476	94.475	0.44661					184	49	6	0	0	0	0.93293	1	11124	11124		51.335	12.529	1	16577000	+		34045	27578	22514	22524	38891	38891					0.08152313228526964
LRGSIRPT	8	Unmodified	_LRGSIRPT_					0	0	0			REV__ENST00000487659.1_1_1:1341772-1341910:-|nuORF	REV__ENST00000487659.1_1_1:1341772-1341910:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2743225097656	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.87064	1	11145	11145		29.15	0	1	19085000	+		34046	27578	22514	22524	38892	38892					0.08152313228526964
LRGSIRPTG	9	Unmodified	_LRGSIRPTG_					0	0	0			REV__ENST00000487659.1_1_1:1341772-1341910:-|nuORF	REV__ENST00000487659.1_1_1:1341772-1341910:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.78564453125	2	478.785433	955.556313	-0.098425	-4.7125E-05	1.3612	0.00065172	1.2628	0.00060459	478.78530530827464	92.434	2.0709	92.504	91.595	93.666	0.06987					117	48	4	0	0	0	0.78983	1	9535	9535		27.882	0	1	727550	+		34047	27578	22515	22525	38893	38893					0.07675698257241947
LRGSKLEKGHL	11	Unmodified	_LRGSKLEKGHL_					0	0	0		nc|ENSG00000185453|Q86XI8|ZSWIM9;ENSG00000185453|ENST00000614654|ZSWIM9	nc|ENSG00000185453|Q86XI8|ZSWIM9	nc|ENSG00000185453|Q86XI8|ZSWIM9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3728637695312	2	619.372404	1236.73025	3.0782	0.0019065	-4.3798	-0.0027127	-1.3016	-0.00080619	619.8710459081657	101.29	0.9677	101.61	101.32	102.29	0.32511					61	26	3	0	0	0	0.70584	1	12368	12368		30.569	3.876	1	2930100			34048	7716	22516	22526	38894	38894					0.12135858962687962
LRGSRTPL	8	Unmodified	_LRGSRTPL_					0	0	0		ENST00000326840.10_1_3:98620151-98620508:-|nuORF	ENST00000326840.10_1_3:98620151-98620508:-|nuORF	ENST00000326840.10_1_3:98620151-98620508:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7552490234375	2	450.274701	898.534849	-0.14218	-6.4019E-05	0.31855	0.00014343	0.17637	7.9415E-05	450.27478726400483	81.059	0.9409	81.123	80.631	81.572	0.064384					40	21	2	0	0	0	0.4196	1	7931	7931		26.693	0	1	106330			34049	10082	22517	22527	38895	38895					0.08152313228526964
LRGTPRSRF	9	Unmodified	_LRGTPRSRF_					0	0	0		ENST00000294753.8_1_1:247492143-247492663:-|nuORF	ENST00000294753.8_1_1:247492143-247492663:-|nuORF	ENST00000294753.8_1_1:247492143-247492663:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.31494140625	2	545.317432	1088.62031	0.65018	0.00035456	-2.1499	-0.0011724	-1.4998	-0.00081784	545.316213260096	93.135	0.92345	93.576	93.271	94.194	0.44099					56	21	3	0	0	0	0.64922	1	11121	11121		44.117	0	1	496970			34050	9708	22518	22528	38896	38896					0.07954478414171717
LRGTRGGGGG	10	Unmodified	_LRGTRGGGGG_					0	0	0		ENSG00000170748|ENST00000306904|RBMXL2	ENSG00000170748|ENST00000306904|RBMXL2	ENSG00000170748|ENST00000306904|RBMXL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	444.2452392578125	2	444.243932	886.473312	4.6482	0.0020649	-2.372	-0.0010537	2.2762	0.0010112	444.2433981750653	107.05	1.0816	107.19	106.83	107.92	0.14929					101	39	5	0	0	0	0.82886	1	13099	13099		37.812	0.65241	1	5789800			34051	6611	22519	22529	38897	38897					0.02553381529253329
LRGTTGLDIGT	11	Unmodified	_LRGTTGLDIGT_					0	0	0			REV__ENST00000492779.5_1_20:34292405-34320086:-|nuORF	REV__ENST00000492779.5_1_20:34292405-34320086:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3062133789062	2	552.306395	1102.59824	0.78014	0.00043088	-0.74693	-0.00041253	0.033219	1.8347E-05	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.62614	1	9521	9521		41.427	0.64845	1	1841700	+		34052	18933	22520	22530	38898	38898					0.051042091551153135
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3428344726562	2	589.341726	1176.6689	-0.3676	-0.00021664	2.4536	0.001446	2.086	0.0012294	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.69995	1	9394	9394		31.53	1.2121	1	11103000	+		34053	17608	22521	22531	38899	38899					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3427124023438	2	589.341726	1176.6689	-0.67475	-0.00039766	2.4486	0.0014431	1.7739	0.0010454	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.69995	1	9567	9567		31.53	2.3598	1	5429300	+		34054	17608	22521	22531	38900	38900					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3426513671875	2	589.341726	1176.6689	-0.6745	-0.00039751	2.6065	0.0015361	1.932	0.0011386	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.73893	1	9807	9807		24.519	0.99649	1	16185000	+		34055	17608	22521	22531	38901	38901					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3421630859375	2	589.341726	1176.6689	2.2135	0.0013045	-0.53137	-0.00031316	1.6821	0.00099136	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.73893	1	9871	9871		24.519	1.4767	1	5579200	+		34056	17608	22521	22531	38902	38902					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3427124023438	2	589.341726	1176.6689	2.472	0.0014569	-0.53238	-0.00031375	1.9396	0.0011431	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.69995	4	9976	9976;10012;10072;10314		31.53	3.2704	1	16740000	+		34057	17608	22521	22531	38903;38904;38905;38906	38903					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.342041015625	2	589.341726	1176.6689	-0.65315	-0.00038493	2.3741	0.0013992	1.7209	0.0010142	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.7144	2	9758	9684;9758		29.17	1.2878	1	5584100	+		34058	17608	22521	22531	38907;38908	38908					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.34326171875	2	589.341726	1176.6689	-0.65438	-0.00038565	2.6476	0.0015603	1.9932	0.0011747	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.65746	3	9899	9899;9910;9946		37.812	14.289	1	16804000	+		34059	17608	22521	22531	38909;38910;38911	38909					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.342529296875	2	589.341726	1176.6689	0.81285	0.00047905	0.87586	0.00051618	1.6887	0.00099523	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.64498	2	9465	9344;9465		39.253	10.083	1	6450100	+		34060	17608	22521	22531	38912;38913	38913					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3428344726562	2	589.341726	1176.6689	0.83312	0.00049099	1.1429	0.00067355	1.976	0.0011645	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.64498	3	9571	9571;9619;10019		39.253	8.9351	1	20363000	+		34061	17608	22521	22531	38914;38915;38916	38914					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.342529296875	2	589.341726	1176.6689	-1.324	-0.00078029	3.0671	0.0018076	1.7431	0.0010273	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.73893	1	9243	9243		24.519	0.99649	1	5946500	+		34062	17608	22521	22531	38917	38917					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3428344726562	2	589.341726	1176.6689	-1.324	-0.0007803	3.288	0.0019378	1.964	0.0011575	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.67778	3	9554	9554;9626;9770		35.152	7.2698	1	17904000	+		34063	17608	22521	22531	38918;38919;38920	38918					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.343505859375	2	589.341726	1176.6689	0.71715	0.00042265	1.778	0.0010479	2.4952	0.0014705	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.65746	1	10944	10944		37.812	4.9991	1	2439600	+		34064	17608	22521	22531	38921	38921					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3429565429688	2	589.341726	1176.6689	0.82336	0.00048524	1.2532	0.00073856	2.0765	0.0012238	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.60058	4	11159	11113;11159;11199;11371		44.377	12.743	1	9460500	+		34065	17608	22521	22531	38922;38923;38924;38925	38923					0.08763210939059718
LRGVFLTLGAM	11	Unmodified	_LRGVFLTLGAM_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3430786132812	2	589.341726	1176.6689	0.15554	9.1664E-05	1.9962	0.0011764	2.1517	0.0012681	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.64498	1	11281	11281		39.253	6.4404	1	10540000	+		34066	17608	22521	22531	38926	38926					0.08763210939059718
LRGVILDIHFL	11	Unmodified	_LRGVILDIHFL_					0	0	0		nc|ENSG00000033170|Q9BYC5-4|FUT8;nc|ENSG00000033170|Q9BYC5-3|FUT8;ENSG00000033170|ENST00000673929|FUT8	nc|ENSG00000033170|Q9BYC5-4|FUT8	nc|ENSG00000033170|Q9BYC5-4|FUT8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3922119140625	2	648.395348	1294.77614	0.024154	1.5661E-05	-3.7072	-0.0024038	-3.6831	-0.0023881	648.3928433509174	107.73	1.0319	107.73	106.84	107.87	0					93	24	4	0	0	0	0.6921	2	11107	11107;11179		32.812	6.1195	1	35129000			34067	890	22522	22532	38927;38928	38927					0.14054504144928615
LRGVILDIHFL	11	Unmodified	_LRGVILDIHFL_					0	0	0		nc|ENSG00000033170|Q9BYC5-4|FUT8;nc|ENSG00000033170|Q9BYC5-3|FUT8;ENSG00000033170|ENST00000673929|FUT8	nc|ENSG00000033170|Q9BYC5-4|FUT8	nc|ENSG00000033170|Q9BYC5-4|FUT8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3936157226562	2	648.395348	1294.77614	-1.1413	-0.00074001	-2.4279	-0.0015742	-3.5692	-0.0023142	648.3936534392657	107.12	0.99413	107.16	106.63	107.62	0.036118					92	23	4	0	0	0	0.7144	1	11439	11439		29.17	0.59333	1	53885000			34068	890	22522	22532	38929	38929					0.14054504144928615
LRGVRQLPH	9	Unmodified	_LRGVRQLPH_					0	0	0			REV__ENST00000564725.1_1_15:74290598-74290640:+|nuORF	REV__ENST00000564725.1_1_15:74290598-74290640:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.326416015625	2	538.327799	1074.64105	1.3454	0.00072427	-3.0293	-0.0016307	-1.6839	-0.00090648	538.3260218082069	100.6	2.6544	100.9	100.26	102.91	0.2999					222	70	6	0	0	0	0.7932	1	12301	12301		24.203	1.1603	1	18713000	+		34069	28843	22523	22533	38930	38930					0.10671068793840277
LRGVRSRVTAP	11	Unmodified	_LRGVRSRVTAP_					0	0	0			REV__ENST00000313552.10_1_2:242664606-242665164:+|nuORF	REV__ENST00000313552.10_1_2:242664606-242665164:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.369384765625	2	606.370195	1210.72584	-1.2685	-0.00076921	0.17559	0.00010647	-1.0929	-0.00066273	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.73893	1	9587	9587		24.519	2.5593	1	823240	+		34070	24924	22524	22534	38931	38931					0.12890394539795125
LRHKASGT	8	Unmodified	_LRHKASGT_					0	0	0			REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2520751953125	2	435.251226	868.487899	-1.3354	-0.00058123	1.6938	0.00073721	0.35838	0.00015599	435.2518916713919	77.486	2.837	77.486	75.833	78.67	0					195	121	3	0	0	0	0.87479	1	7106	7106		30.504	0	1	487350	+		34071	20501	22525	22535	38932	38932					0.048394536773685104
LRHKASGT	8	Unmodified	_LRHKASGT_					0	0	0			REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25152587890625	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87064	1	7845	7845		29.15	3.6994	1	2823900	+		34072	20501	22525	22535	38933	38933					0.048394536773685104
LRHKASGT	8	Unmodified	_LRHKASGT_					0	0	0			REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25189208984375	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.884	1	8337	8337		33.516	9.3128	1	3370400	+		34073	20501	22525	22535	38934	38934					0.048394536773685104
LRHKASGT	8	Unmodified	_LRHKASGT_					0	0	0			REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2516174316406	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.87479	1	7236	7236		30.504	0	1	712390	+		34074	20501	22525	22535	38935	38935					0.048394536773685104
LRHKASGT	8	Unmodified	_LRHKASGT_					0	0	0			REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2517395019531	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.89043	1	7806	7806		35.618	5.1146	1	2743300	+		34075	20501	22525	22535	38936	38936					0.048394536773685104
LRHKASGT	8	Unmodified	_LRHKASGT_					0	0	0			REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25213623046875	2	435.251226	868.487899	0.18475	8.0413E-05	1.8989	0.0008265	2.0837	0.00090692	435.25121288017317	76.886	2.3553	77.455	76.392	78.747	0.56836					103	62	3	0	0	0	0.86677	1	8779	8779		27.882	2.4321	1	485820	+		34076	20501	22525	22535	38937	38937					0.048394536773685104
LRHKGSALLEK	11	Unmodified	_LRHKGSALLEK_					0	0	0		nc|ENSG00000169247|Q8TF17-4|SH3TC2;ENST00000504517.5_1_5:148386573-148411207:-|nuORF;ENST00000510779.1_1_5:148384276-148408226:-|nuORF;nc|ENSG00000169247|Q8TF17-5|SH3TC2;ENSG00000169247|ENST00000515425|SH3TC2	nc|ENSG00000169247|Q8TF17-4|SH3TC2	nc|ENSG00000169247|Q8TF17-4|SH3TC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.92242431640625	3	417.922578	1250.7459	0.73411	0.0003068	-1.4619	-0.00061096	-0.7278	-0.00030416	417.9219647760214	105.64	2.8346	105.75	104.94	107.78	0.10766					247	69	5	0	0	0	0.73893	1	11242	11242		16.53	0.6092	1	29053000			34077	6481	22526	22536	38938	38938					0.1305614547973164
LRHKPESKKA	10	Unmodified	_LRHKPESKKA_					0	0	0			REV__ENST00000479895.1_1_16:56940598-56940763:+|nuORF	REV__ENST00000479895.1_1_16:56940598-56940763:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.3577270507812	2	597.359296	1192.70404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.367	1	78.424	77.924	78.924	0.056114								0	0	0	0.45132	1	7607	7607		30.318	2.4355	1		+		34078	27407	22527	22537	38939	38939					0.11539589791209437
LRHPYKGRKRF	11	Unmodified	_LRHPYKGRKRF_					0	0	0			REV__ENST00000311549.10_1_13:27825489-27827914:+|nuORF	REV__ENST00000311549.10_1_13:27825489-27827914:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.6270751953125	3	486.624866	1456.85277	3.9672	0.0019305	1.53	0.00074454	5.4972	0.0026751	486.625118109721	105.82	0.62193	106	105.69	106.32	0.18647					37	18	3	0	0	0	0.76579	1	12936	12936		18.531	6.0982	1	272160	+		34079	24905	22528	22538	38940	38940					0.1426174048476696
LRHRLQWWRKF	11	Unmodified	_LRHRLQWWRKF_					0	0	0		ENSG00000256525|ENST00000539111|POLG2;ENST00000580893.5_1_17:62486773-62489133:-|nuORF;ENST00000585141.5_1_17:62481823-62493086:-|nuORF	ENSG00000256525|ENST00000539111|POLG2	ENSG00000256525|ENST00000539111|POLG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78515625	4	407.237656	1624.92152	0.096257	3.9199E-05	-3.8251	-0.0015577	-3.7288	-0.0015185	407.2360391702448	30.989	0.34862	30.993	30.753	31.101	0.0037212					12	7	2	0	0	0	0.18028	1	2077	2077		6.3209	0.6221	1	85044			34080	8898	22529	22539	38941	38941					0.13405404784452912
LRIDCPSSNN	10	Unmodified	_LRIDCPSSNN_					0	0	0			REV__ENSG00000008226|ENST00000308059|DLEC1	REV__ENSG00000008226|ENST00000308059|DLEC1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	559.7255859375	2	559.76658	1117.51861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.639	1	45.635	45.135	46.135	-0.0041618								0	0	0	0.45132	1	3641	3641		29.17	2.4771	1		+		34081	16130	22530	22540	38942	38942					-0.0354518079054742
LRIDYHYRKGI	11	Unmodified	_LRIDYHYRKGI_					0	0	0			REV__ENSG00000132429|ENST00000254765|POPDC3	REV__ENSG00000132429|ENST00000254765|POPDC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.60418701171875	3	478.605249	1432.79392	-0.30657	-0.00014672	-2.581	-0.0012353	-2.8875	-0.001382	478.60388367454374	15.982	0.20497	15.902	15.803	16.008	-0.080017					19	8	3	0	0	0	0.74771	1	72	72		22.562	4.0305	1	137140	+		34082	19003	22531	22541	38943	38943					0.0948321939977177
LRIEGATL	8	Unmodified	_LRIEGATL_					0	0	0		ENSG00000116903|ENST00000366645|EXOC8	ENSG00000116903|ENST00000366645|EXOC8	ENSG00000116903|ENST00000366645|EXOC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2658386230469	2	436.763635	871.512717	1.7626	0.00076985	-0.96852	-0.00042301	0.79409	0.00034683	436.7629205376576	26.512	1.1482	26.479	25.815	26.963	-0.032125					62	27	3	0	0	0	0.81548	1	1082	1082		20.482	0	1	159520			34083	2954	22532	22542	38944	38944					0.071820887600893
LRIFRSIIP	9	Unmodified	_LRIFRSIIP_					0	0	0			REV__ENSG00000102104|ENST00000379984|RS1	REV__ENSG00000102104|ENST00000379984|RS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.8606567382812	2	557.858401	1113.70225	0.14047	7.836E-05	0.29476	0.00016443	0.43522	0.00024279	557.8575736405348	21.047	0.48397	21.122	20.884	21.368	0.075848					31	22	3	0	0	0	0.7932	1	587	587		16.473	0	1	83619	+		34084	17324	22533	22543	38945	38945					0.14994580773281996
LRIFRSIIP	9	Unmodified	_LRIFRSIIP_					0	0	0			REV__ENSG00000102104|ENST00000379984|RS1	REV__ENSG00000102104|ENST00000379984|RS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	557.858401	1113.70225	0.21217	0.00011836	-2.7105	-0.0015121	-2.4984	-0.0013937	557.8574713544627	21.095	0.083496	21.141	21.079	21.163	0.045401	-0.052518	-0.0023442	NaN	16.473	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59918	+		34085	17324	22533	22543							0.14994580773281996
LRIFRSIIP	9	Unmodified	_LRIFRSIIP_					0	0	0			REV__ENSG00000102104|ENST00000379984|RS1	REV__ENSG00000102104|ENST00000379984|RS1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	557.858401	1113.70225	0.14047	7.836E-05	0.29476	0.00016443	0.43522	0.00024279	557.8575736405348	21.047	0.48397	21.122	20.884	21.368	0.075848	-0.070789	0.0010089	NaN	16.473	31	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83619	+		34086	17324	22533	22543							0.14994580773281996
LRIFRSIIP	9	Unmodified	_LRIFRSIIP_					0	0	0			REV__ENSG00000102104|ENST00000379984|RS1	REV__ENSG00000102104|ENST00000379984|RS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	557.858401	1113.70225	0.9462	0.00052785	0.26626	0.00014854	1.2125	0.00067638	557.8570650504872	21.333	0.23365	21.317	21.172	21.406	-0.016428	0.12331	0.00097711	NaN	16.473	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79550	+		34087	17324	22533	22543							0.14994580773281996
LRIFTIAFNL	10	Unmodified	_LRIFTIAFNL_					0	0	0		ENSG00000173988|ENST00000595396|LRRC63	ENSG00000173988|ENST00000595396|LRRC63	ENSG00000173988|ENST00000595396|LRRC63	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3654174804688	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.56	1	114.53	114.03	115.03	-0.024452								0	0	0	0.45132	1	12695	12695		20.947	0.95016	1				34088	6902	22534	22544	38946	38946					0.11739143707859512
LRIGKLKAKII	11	Unmodified	_LRIGKLKAKII_					0	0	0		ENST00000551270.1_1_12:104283206-104309165:-|nuORF;nc|ENSG00000214198|Q6P2S7-2|TTC41P;nc|ENSG00000214198|Q6P2S7|TTC41P	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.2976379394531	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.395	1	66.395	65.895	66.895	0								0	0	0	0.56276	1	5854	5854		3.2113	0.18535	1				34089	13669	22535	22545	38947	38947					0.25959946829675573
LRIGKLKAKII	11	Unmodified	_LRIGKLKAKII_					0	0	0		ENST00000551270.1_1_12:104283206-104309165:-|nuORF;nc|ENSG00000214198|Q6P2S7-2|TTC41P;nc|ENSG00000214198|Q6P2S7|TTC41P	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.2982482910156	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.504	1	69.467	68.967	69.967	-0.036957								0	0	0	0.56276	1	6734	6734		9.2118	0	1				34090	13669	22535	22545	38948	38948					0.25959946829675573
LRIGKLKAKII	11	Unmodified	_LRIGKLKAKII_					0	0	0		ENST00000551270.1_1_12:104283206-104309165:-|nuORF;nc|ENSG00000214198|Q6P2S7-2|TTC41P;nc|ENSG00000214198|Q6P2S7|TTC41P	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2972412109375	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.009	1	76.405	75.905	76.905	0.39507								0	0	0	0.56276	1	8614	8614		8.4073	2.7085	1				34091	13669	22535	22545	38949	38949					0.25959946829675573
LRIHSLPF	8	Unmodified	_LRIHSLPF_					0	0	0			REV__ENST00000569217.1_1_16:28854298-28855510:-|nuORF	REV__ENST00000569217.1_1_16:28854298-28855510:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7960205078125	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.81548	1	4655	4655		20.482	0	1	1898900	+		34092	28909	22536	22546	38950	38950					0.08446074267988024
LRIKHGNDWAT	11	Unmodified	_LRIKHGNDWAT_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1;ENST00000447863.5_1_7:86811523-86824453:+|nuORF;ENST00000582887.1_1_7:86811523-86815316:+|nuORF;ENST00000425406.5_1_7:86811523-86817410:+|nuORF	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.5687255859375	3	437.570316	1309.68912	0.14053	6.1493E-05	-0.85472	-0.000374	-0.71419	-0.00031251	437.569795972988	34.491	0.53151	34.6	34.322	34.853	0.10829					55	23	3	0	0	0	0.75121	1	1766	1766		21.78	0.094677	1	195820			34093	3990	22537	22547	38951	38951					0.04666097923222878
LRIKKTLAKM	10	Unmodified	_LRIKKTLAKM_					0	0	0		ENST00000403332.2_1_6:129478670-129479855:-|nuORF;ENSG00000107779|ENST00000372037|BMPR1A	ENST00000403332.2_1_6:129478670-129479855:-|nuORF	ENST00000403332.2_1_6:129478670-129479855:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.3006591796875	2	601.394293	1200.77403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.841	1	60.872	60.372	61.372	0.0312								0	0	0	0.45132	1	5681	5681		25.574	1.3713	1				34094	2368	22538	22548	38952	38952					0.18167752135468618
LRIKLALLL	9	Unmodified	_LRIKLALLL_					0	0	0		nc|ENSG00000114487|Q86VD1-2|MORC1;ENSG00000114487|ENST00000232603|MORC1	nc|ENSG00000114487|Q86VD1-2|MORC1	nc|ENSG00000114487|Q86VD1-2|MORC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.80810546875	2	526.881345	1051.74814	2.1526	0.0011342	0.69463	0.00036599	2.8472	0.0015001	526.8817060790388	100.53	0.12086	100.83	100.73	100.85	0.2999					4	2	2	0	0	0	0.20789	1	12172	12172		3.41	0	1	32011			34095	2774	22539	22549	38953	38953					0.22433225955501257
LRIKVKKGLHV	11	Unmodified	_LRIKVKKGLHV_					0	0	0		ENSG00000006118|ENST00000453848|TMEM132A;nc|ENSG00000006118|Q24JP5-2|TMEM132A;nc|ENSG00000006118|Q24JP5-3|TMEM132A	ENSG00000006118|ENST00000453848|TMEM132A	ENSG00000006118|ENST00000453848|TMEM132A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.95977783203125	3	430.962597	1289.86596	-1.1979	-0.00051624	-3.9994	-0.0017236	-5.1973	-0.0022398	430.96070559366615	40.578	1.0757	41.167	40.797	41.872	0.58915					92	30	5	0	0	0	0.8498	1	3483	3483		6.001	0.58812	1	17366000			34096	694	22540	22550	38954	38954					0.23262178544177914
LRILFPHS	8	Unmodified	_LRILFPHS_					0	0	0			REV__nc|ENSG00000293442|O43930|PRKY	REV__nc|ENSG00000293442|O43930|PRKY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7976989746094	2	491.795269	981.575986	-2.2358	-0.0010995	3.4586	0.0017009	1.2228	0.00060138	491.7969104040022	67.792	0.42151	67.823	67.72	68.142	0.030571					22	17	2	0	0	0	0.82464	1	6454	6454		21.702	2.3424	1	45189	+		34097	22637	22541	22551	38955	38955					0.08446074267988024
LRILLDPWLI	10	Unmodified	_LRILLDPWLI_					0	0	0			REV__ENST00000329314.5_1_4:165897854-165898724:-|nuORF	REV__ENST00000329314.5_1_4:165897854-165898724:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3903198242188	2	626.394816	1250.77508	6.5284	0.0040894	-3.2921	-0.0020622	3.2363	0.0020272	626.3926332605848	110.43	0.80482	110.5	110.23	111.04	0.068001					53	30	2	0	0	0	0.8608	1	13401	13401		34.173	5.0025	1	332460	+		34098	25103	22542	22552	38956	38956					0.15972289776027537
LRILRDAS	8	Unmodified	_LRILRDAS_					0	0	0			REV__nc|ENSG00000094841|Q96BW1-3|UPRT	REV__nc|ENSG00000094841|Q96BW1-3|UPRT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.288330078125	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.87922	1	12288	12288		31.955	5.1588	1	3080300	+		34099	17046	22543	22553	38957	38957					0.08748582399982752
LRIRAFGDRI	10	Unmodified	_LRIRAFGDRI_					0	0	0			REV__ENST00000483541.1_1_10:123719867-123724812:-|nuORF	REV__ENST00000483541.1_1_10:123719867-123724812:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2479248046875	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.08	1	117.11	116.61	117.61	0.026466								0	0	0	0.45132	1	12868	12868		20.03	1.6988	1		+		34100	17670	22544	22554	38958	38958					0.12079296028127828
LRISGPNLYDL	11	Unmodified	_LRISGPNLYDL_					0	0	0			REV__ENSG00000064703|ENST00000369702|DDX20	REV__ENSG00000064703|ENST00000369702|DDX20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	630.851318359375	2	630.85097	1259.68739	0.2487	0.00015689	0.42121	0.00026572	0.6699	0.00042261	631.3535549664575	60.352	0.48878	60.32	60.142	60.631	-0.031727					17	12	2	0	0	0	0.69248	1	5698	5698		32.751	0	1	120880	+		34101	16483	22545	22555	38959	38959					0.06793044114624536
LRIWRMKRKT	10	Unmodified	_LRIWRMKRKT_					0	0	0		ENST00000346991.9_1_15:40939257-40942558:+|nuORF	ENST00000346991.9_1_15:40939257-40942558:+|nuORF	ENST00000346991.9_1_15:40939257-40942558:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2538757324219	3	463.287086	1386.83943	-1.1939	-0.00055313	-2.8847	-0.0013365	-4.0787	-0.0018896	463.619958457058	83.948	0.37458	83.948	83.625	84	0					11	9	2	0	0	0	0.37624	1	7884	7884		6.6596	5.2409	1	25120			34102	10313	22546	22556	38960	38960					0.1614816638116281
LRKAGHLC	8	Unmodified	_LRKAGHLC_					0	0	0		nc|ENSG00000182606|Q9UPV9-3|TRAK1	nc|ENSG00000182606|Q9UPV9-3|TRAK1	nc|ENSG00000182606|Q9UPV9-3|TRAK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.259765625	2	449.257997	896.501441	2.2924	0.0010299	2.758	0.0012391	5.0505	0.002269	449.2585996491544	100.52	1.0502	100.86	100.41	101.46	0.3459					58	25	3	0	0	0	0.92176	1	12208	12208		46.766	2.2354	1	361540			34103	15141	22547	22557	38961	38961					0.04904988184955528
LRKAPPLPIF	10	Unmodified	_LRKAPPLPIF_					0	0	0			REV__ENST00000441488.6_1_11:67925157-67938746:-|nuORF	REV__ENST00000441488.6_1_11:67925157-67938746:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3660278320312	2	576.368601	1150.72265	-1.8889	-0.0010887	1.4195	0.00081817	-0.46939	-0.00027054	576.3692460621713	40.332	1.1916	40.921	40.26	41.451	0.58915					99	31	4	0	0	0	0.86305	1	3442	3442		31.955	2.8053	1	6057000	+		34104	17792	22548	22558	38962	38962					0.153317514330638
LRKCLLAAVC	10	Unmodified	_LRKCLLAAVC_					0	0	0		ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3191528320312	2	545.317197	1088.61984	0.15103	8.2357E-05	-1.2223	-0.00066653	-1.0712	-0.00058417	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.85934	1	8582	8582		35.618	5.1146	1	5755000			34105	10333	22549	22559	38963	38963					0.07907599378449959
LRKDLKLVH	9	Unmodified	_LRKDLKLVH_					0	0	0		ENSG00000173597|ENST00000310613|SULT1B1	ENSG00000173597|ENST00000310613|SULT1B1	ENSG00000173597|ENST00000310613|SULT1B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3629760742188	2	561.361308	1120.70806	-0.061787	-3.4685E-05	3.5032	0.0019666	3.4414	0.0019319	561.3631099932169	44.376	1.0511	44.826	44.16	45.211	0.45024					79	25	4	0	0	0	0.7932	1	4064	4064		24.203	1.6231	1	3514300			34106	6873	22550	22560	38964	38964					0.15253679284933241
LRKEGRIMWII	11	Unmodified	_LRKEGRIMWII_					0	0	0			REV__nc|ENSG00000138119|Q9NZM1-2|MYOF	REV__nc|ENSG00000138119|Q9NZM1-2|MYOF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28643798828125	3	472.28323	1413.82786	-0.026913	-1.271E-05	-0.88478	-0.00041787	-0.9117	-0.00043058	472.28222422819385	101.61	1.7417	101.65	101.14	102.88	0.044815					90	41	4	0	0	0	0.17955	1	11058	11058		12.957	9.3384	1	267120	+		34107	29884	22551	22561	38965	38965					0.1374992456721884
LRKEKNIYVS	10	Unmodified	_LRKEKNIYVS_					0	0	0			REV__ENSG00000005073|ENST00000006015|HOXA11	REV__ENSG00000005073|ENST00000006015|HOXA11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2463684082031	3	417.24695	1248.71902	3.2844	0.0013704	-2.6159	-0.0010915	0.66849	0.00027892	417.2457501316996	103.39	0.51698	103.65	103.46	103.97	0.26524					28	11	3	0	0	0	0.86348	1	12634	12634		23.378	0	1	1811600	+		34108	16073	22552	22562	38966	38966					0.10461036868559859
LRKEKRHLRKA	11	Unmodified	_LRKEKRHLRKA_					0	0	0		ENSG00000146909|ENST00000275820|NOM1	ENSG00000146909|ENST00000275820|NOM1	ENSG00000146909|ENST00000275820|NOM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3101501464844	3	478.975788	1433.90553	0.22007	0.00010541	-3.5834	-0.0017164	-3.3634	-0.001611	478.9740845349807	44.981	2.0928	44.958	43.729	45.822	-0.023079					123	48	4	0	0	0	0.76251	1	3389	3389		19.263	9.6165	1	463950			34109	4869	22553	22563	38967	38967					0.20593698547577333
LRKELFILLA	10	Unmodified	_LRKELFILLA_					0	0	0			REV__ENST00000530149.1_1_11:211118-211532:+|nuORF	REV__ENST00000530149.1_1_11:211118-211532:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2962951660156	3	405.932303	1214.77508	-0.9503	-0.00038576	2.5145	0.0010207	1.5642	0.00063494	405.93319786079275	36.871	1.5596	36.818	36.066	37.625	-0.053558					87	34	4	0	0	0	0.37624	1	2575	2575		11.636	7.2971	1	225210	+		34110	22241	22554	22564	38968	38968					0.17628289776030215
LRKELLTLIC	10	Unmodified	_LRKELLTLIC_					0	0	0		ENST00000537850.1_1_14:22887665-22887761:-|nuORF	ENST00000537850.1_1_14:22887665-22887761:-|nuORF	ENST00000537850.1_1_14:22887665-22887761:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	401.247802734375	3	401.249415	1200.72641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.28	1	116.31	115.81	116.81	0.026466								0	0	0	0.45132	1	12774	12774		19.263	0.73163	1				34111	13454	22555	22565	38969	38969					0.13408053144644327
LRKERFERRQR	11	Unmodified	_LRKERFERRQR_					0	0	0			REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.9805297851562	3	525.309718	1572.90732	2.364	0.0012419	1.3016	0.00068374	3.6656	0.0019256	525.3086540767616	104.83	1.8627	104.98	104.56	106.42	0.15584					154	54	6	0	0	0	0.75121	3	12763	12759;12763;12771		21.78	5.2344	1	420070	+		34112	17481	22556	22566	38970;38971;38972	38971					0.1437870756551547
LRKERFERRQR	11	Unmodified	_LRKERFERRQR_					0	0	0			REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	525.309718	1572.90732	-0.11825	-6.2117E-05	3.2422	0.0017031	3.1239	0.001641	525.3098738474649	105.03	1.595	105.18	104.68	106.27	0.15924	0.032127	0.001552	NaN	21.78	122	40	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	415510	+		34113	17481	22556	22566							0.1437870756551547
LRKERFERRQR	11	Unmodified	_LRKERFERRQR_					0	0	0			REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	525.309718	1572.90732	0.8281	0.00043501	2.3182	0.0012178	3.1463	0.0016528	525.3095263028607	105.19	1.8832	105.3	104.43	106.31	0.10766	0.14996	9.5903E-05	NaN	21.78	130	47	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	268200	+		34114	17481	22556	22566							0.1437870756551547
LRKERFERRQR	11	Unmodified	_LRKERFERRQR_					0	0	0			REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	525.309718	1572.90732	-1.5324	-0.00080501	5.2567	0.0027614	3.7242	0.0019564	525.3107373546372	105.07	1.5537	105.15	104.73	106.28	0.073112	-0.0044645	0.0047266	NaN	21.78	98	38	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	388230	+		34115	17481	22556	22566							0.1437870756551547
LRKFKKLYKNK	11	Unmodified	_LRKFKKLYKNK_					0	0	0		ENST00000543809.5_1_12:28605516-28605582:+|nuORF	ENST00000543809.5_1_12:28605516-28605582:+|nuORF	ENST00000543809.5_1_12:28605516-28605582:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.3210754394531	3	489.317039	1464.92929	-0.80295	-0.0003929	3.5224	0.0017236	2.7195	0.0013307	489.31869096859845	16.472	0.55229	16.519	16.376	16.929	0.047802					62	24	4	0	0	0	0.80813	1	145	145		9.6461	4.2332	1	902930			34116	13562	22557	22567	38973	38973					0.2154211926140306
LRKGAKLF	8	Unmodified	_LRKGAKLF_					0	0	0		nc|ENSG00000157617|Q9Y426-2|C2CD2;nc|ENSG00000157617|Q9Y426-3|C2CD2;ENSG00000157617|ENST00000380486|C2CD2	nc|ENSG00000157617|Q9Y426-2|C2CD2	nc|ENSG00000157617|Q9Y426-2|C2CD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.8061828613281	2	466.805637	931.596721	0.30307	0.00014147	1.3469	0.00062874	1.65	0.00077022	466.80614400295406	31.083	0.53593	31.081	30.784	31.32	-0.0022526					39	26	2	0	0	0	0.81548	1	1413	1413		20.482	0	1	91132			34117	5442	22558	22568	38974	38974					0.12818664647647893
LRKGGPQN	8	Unmodified	_LRKGGPQN_					0	0	0			REV__ENST00000464110.1_1_22:24179249-24180975:-|nuORF;REV__ENST00000464034.5_1_22:24179058-24179882:-|nuORF	REV__ENST00000464034.5_1_22:24179058-24179882:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2523498535156	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87922	1	7620	7620		31.955	5.1588	1	1788100	+		34118	17118;27085	22559	22569	38975	38975					0.048394536773685104
LRKGGPQN	8	Unmodified	_LRKGGPQN_					0	0	0			REV__ENST00000464110.1_1_22:24179249-24180975:-|nuORF;REV__ENST00000464034.5_1_22:24179058-24179882:-|nuORF	REV__ENST00000464034.5_1_22:24179058-24179882:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2517395019531	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87922	1	7561	7561		31.955	7.7521	1	2823900	+		34119	17118;27085	22559	22569	38976	38976					0.048394536773685104
LRKGVLAL	8	Unmodified	_LRKGVLAL_					0	0	0		ENSG00000148803|ENST00000278025|FUOM	ENSG00000148803|ENST00000278025|FUOM	ENSG00000148803|ENST00000278025|FUOM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001403808594	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.86294	1	7851	7851		8.8223	0	1	6323600			34120	4983	22560	22570	38977	38977					0.14627262273336328
LRKIFSSLLYN	11	Unmodified	_LRKIFSSLLYN_					0	0	0		ENST00000476385.1_1_3:142660339-142660513:+|nuORF	ENST00000476385.1_1_3:142660339-142660513:+|nuORF	ENST00000476385.1_1_3:142660339-142660513:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9330749511719	3	451.934484	1352.78162	-0.13819	-6.2454E-05	-3.9218	-0.0017724	-4.06	-0.0018349	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.74771	1	10695	10695		22.562	2.2466	1	924270			34121	12337	22561	22571	38978	38978					0.11934182936761317
LRKIRKNGY	9	Unmodified	_LRKIRKNGY_					0	0	0			REV__ENST00000393800.6_2_11:68381975-68382077:+|nuORF	REV__ENST00000393800.6_2_11:68381975-68382077:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3570556640625	2	574.356557	1146.69856	-1.3728	-0.00078849	0.24135	0.00013862	-1.1315	-0.00064987	574.3566305310679	99.909	3.0439	100.08	98.131	101.18	0.17199					143	70	3	0	0	0	0.7932	1	10313	10313		25.45	4.613	1	243780	+		34122	26064	22562	22572	38979	38979					0.13107910999428896
LRKKFFEKKFT	11	Unmodified	_LRKKFFEKKFT_					0	0	0		nc|ENSG00000105982|Q9H0A6-2|RNF32;ENSG00000105982|ENST00000317955|RNF32	nc|ENSG00000105982|Q9H0A6-2|RNF32	nc|ENSG00000105982|Q9H0A6-2|RNF32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.298583984375	3	491.297645	1470.87111	-0.0791	-3.8862E-05	2.9922	0.0014701	2.9131	0.0014312	491.2990070775852	111.38	0.92337	111.32	111.11	112.03	-0.059937					68	29	3	0	0	0	0.80593	1	12161	12161		10.104	1.3046	1	198860			34123	2270	22563	22573	38980	38980					0.1545043761609577
LRKKFFEKKFT	11	Unmodified	_LRKKFFEKKFT_					0	0	0		nc|ENSG00000105982|Q9H0A6-2|RNF32;ENSG00000105982|ENST00000317955|RNF32	nc|ENSG00000105982|Q9H0A6-2|RNF32	nc|ENSG00000105982|Q9H0A6-2|RNF32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.6334228515625	3	491.297645	1470.87111	2.8435	0.001397	-0.067312	-3.307E-05	2.7761	0.0013639	491.29766695504253	111.68	0.68246	111.66	111.39	112.07	-0.025414					47	26	2	0	0	0	0.7896	1	12369	12369		13.508	4.2961	1	55512			34124	2270	22563	22573	38981	38981					0.1545043761609577
LRKKIKDLWMP	11	Unmodified	_LRKKIKDLWMP_					0	0	0			REV__nc|ENSG00000079263|Q13342-3|SP140	REV__nc|ENSG00000079263|Q13342-3|SP140	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62310791015625	3	476.623364	1426.84826	-1.6911	-0.000806	2.4072	0.0011473	0.71614	0.00034133	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.7896	1	12633	12633		13.508	4.2961	1	2577100	+		34125	16778	22564	22574	38982	38982					0.15191095226964535
LRKKKNLLLQY	11	Unmodified	_LRKKKNLLLQY_					0	0	0		nc|ENSG00000185559|P80370-2|DLK1;ENSG00000185559|ENST00000341267|DLK1	nc|ENSG00000185559|P80370-2|DLK1	nc|ENSG00000185559|P80370-2|DLK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.9707336425781	3	472.973161	1415.89765	-1.6394	-0.00077538	-2.945	-0.0013929	-4.5844	-0.0021683	472.9717127008119	49.434	3.3366	49.434	48.538	51.875	0					243	82	4	0	0	0	0.78683	6	3936	3887;3912;3924;3936;3960;3972		14.086	6.8483	1	1017000			34126	7723	22565	22575	38983;38984;38985;38986;38987;38988	38986					0.2063412650745704
LRKKKNLLLQY	11	Unmodified	_LRKKKNLLLQY_					0	0	0		nc|ENSG00000185559|P80370-2|DLK1;ENSG00000185559|ENST00000341267|DLK1	nc|ENSG00000185559|P80370-2|DLK1	nc|ENSG00000185559|P80370-2|DLK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.970947265625	3	472.973161	1415.89765	-0.70224	-0.00033214	-4.0023	-0.001893	-4.7045	-0.0022251	472.9712636412795	49.393	3.7524	49.369	48.706	52.459	-0.024033					207	93	4	0	0	0	0.78683	3	4249	4224;4249;4273		14.086	4.7086	1	1446100			34127	7723	22565	22575	38989;38990;38991	38990					0.2063412650745704
LRKKKNLLLQY	11	Unmodified	_LRKKKNLLLQY_					0	0	0		nc|ENSG00000185559|P80370-2|DLK1;ENSG00000185559|ENST00000341267|DLK1	nc|ENSG00000185559|P80370-2|DLK1	nc|ENSG00000185559|P80370-2|DLK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.97100830078125	3	472.973161	1415.89765	-0.95095	-0.00044977	-3.7122	-0.0017558	-4.6632	-0.0022056	472.971385713144	49.546	3.8081	49.55	48.972	52.78	0.0035973					232	95	4	0	0	0	0.71207	6	4150	4150;4173;4221;4233;4245;4296		29.551	14.218	1	1400600			34128	7723	22565	22575	38992;38993;38994;38995;38996;38997	38992					0.2063412650745704
LRKKKNLLLQY	11	Unmodified	_LRKKKNLLLQY_					0	0	0		nc|ENSG00000185559|P80370-2|DLK1;ENSG00000185559|ENST00000341267|DLK1	nc|ENSG00000185559|P80370-2|DLK1	nc|ENSG00000185559|P80370-2|DLK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.9710388183594	3	472.973161	1415.89765	-0.99151	-0.00046896	-3.5581	-0.0016829	-4.5496	-0.0021518	472.9714128496593	48.869	1.9906	48.895	48.114	50.105	0.025574					169	50	5	0	0	0	0.78683	3	3821	3750;3811;3821		14.086	2.1536	1	1653800			34129	7723	22565	22575	38998;38999;39000	39000					0.2063412650745704
LRKKKNLLLQY	11	Unmodified	_LRKKKNLLLQY_					0	0	0		nc|ENSG00000185559|P80370-2|DLK1;ENSG00000185559|ENST00000341267|DLK1	nc|ENSG00000185559|P80370-2|DLK1	nc|ENSG00000185559|P80370-2|DLK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.9709777832031	3	472.973161	1415.89765	-0.32273	-0.00015264	-4.2417	-0.0020062	-4.5644	-0.0021589	472.97110855573317	48.963	2.2671	48.87	48.252	50.519	-0.093182					180	57	5	0	0	0	0.74022	4	3826	3736;3781;3792;3826		24.232	15.825	1	1641600			34130	7723	22565	22575	39001;39002;39003;39004	39004					0.2063412650745704
LRKKRLKKF	9	Unmodified	_LRKKRLKKF_					0	0	0		nc|ENSG00000167210|Q8IVV2|LOXHD1;ENSG00000167210|ENST00000642948|LOXHD1;ENST00000335730.6_1_18:44089558-44181581:-|nuORF	nc|ENSG00000167210|Q8IVV2|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.29779052734375	3	406.28367	1215.82918	-0.1829	-7.4309E-05	0.69492	0.00028234	0.51202	0.00020803	406.283855688026	71.757	0.78133	72.307	71.825	72.606	0.55009					32	18	3	0	0	0	0.20789	1	7979	7979		8.6937	0.88917	1	94256			34131	6278	22566	22576	39005	39005					0.22989926718264542
LRKLAAPV	8	Unmodified	_LRKLAAPV_					0	0	0			REV__ENST00000497393.1_1_3:120469390-120469879:+|nuORF	REV__ENST00000497393.1_1_3:120469390-120469879:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.2921447753906	2	434.292362	866.570172	1.3298	0.00057754	-1.2334	-0.00053567	0.096397	4.1864E-05	434.29169449906215	74.098	0.89874	74.141	73.805	74.703	0.043648					67	35	2	0	0	0	0.81548	1	7170	7170		20.482	0	1	752660	+		34132	20355	22567	22577	39006	39006					0.13154975756310705
LRKLKRPP	8	Unmodified	_LRKLKRPP_					0	0	0		nc|ENSG00000162522|Q9P206|NHSL3;chr1:32765827-32767787|30|12.0|0.58|4.37|+|ENST00000373480|KIAA1522,KIAA1522;nc|ENSG00000162522|Q9P206-3|NHSL3;ENSG00000162522|ENST00000401073|KIAA1522	nc|ENSG00000162522|Q9P206|NHSL3	nc|ENSG00000162522|Q9P206|NHSL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3446960449219	2	504.345461	1006.67637	0.37851	0.0001909	-0.71644	-0.00036133	-0.33793	-0.00017043	504.3450503233635	54.756	1.9259	55.325	53.982	55.908	0.56836					89	45	3	0	0	0	0.88915	1	5568	5568		35.201	0	1	1764400			34133	49	22568	22578	39007	39007					0.17329731321649433
LRKLKTWYQTS	11	Unmodified	_LRKLKTWYQTS_					0	0	0		ENSG00000102970|ENST00000219244|CCL17	ENSG00000102970|ENST00000219244|CCL17	ENSG00000102970|ENST00000219244|CCL17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	475.6065979003906	3	475.273388	1422.79833	-0.66012	-0.00031374	2.8279	0.001344	2.1678	0.0010303	475.27507367632586	51.473	1.3613	51.45	50.834	52.195	-0.02343					71	35	4	0	0	0	0.69071	1	4541	4541		33.039	13.009	1	171660			34134	2038	22569	22579	39008	39008					0.10384683822712759
LRKLNQKTY	9	Unmodified	_LRKLNQKTY_					0	0	0			REV__ENSG00000188997|ENST00000340067|KCTD21	REV__ENSG00000188997|ENST00000340067|KCTD21	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3505859375	2	582.348397	1162.68224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	120	1	119.96	119.46	120.46	-0.035965								0	0	0	0.32469	1	13291	13291		21.96	1.013	1		+		34135	23054	22570	22580	39009	39009					0.10740785042662537
LRKMLLSVFG	10	Unmodified	_LRKMLLSVFG_					0	0	0			REV__ENST00000442739.1_1_22:21363397-21363730:-|nuORF	REV__ENST00000442739.1_1_22:21363397-21363730:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3536987304688	2	582.352094	1162.68964	-0.84093	-0.00048972	3.1729	0.0018477	2.3319	0.001358	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.86452	1	11291	11291		30.504	0.18592	1	77752000	+		34136	26773	22571	22581	39010	39010					0.11479801318728278
LRKMLLSVFG	10	Unmodified	_LRKMLLSVFG_					0	0	0			REV__ENST00000442739.1_1_22:21363397-21363730:-|nuORF	REV__ENST00000442739.1_1_22:21363397-21363730:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353759765625	2	582.352094	1162.68964	3.1803	0.0018521	-0.95025	-0.00055338	2.2301	0.0012987	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.86589	1	11306	11306		29.15	2.4566	1	77008000	+		34137	26773	22571	22581	39011	39011					0.11479801318728278
LRKMLLSVFG	10	Unmodified	_LRKMLLSVFG_					0	0	0			REV__ENST00000442739.1_1_22:21363397-21363730:-|nuORF	REV__ENST00000442739.1_1_22:21363397-21363730:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353759765625	2	582.352094	1162.68964	3.1755	0.0018492	-0.56455	-0.00032877	2.6109	0.0015205	582.3516873640681	107.33	0.84415	107.3	106.75	107.59	-0.034134					36	19	2	0	0	0	0.86589	1	11826	11826		29.15	0	1	898660	+		34138	26773	22571	22581	39012	39012					0.11479801318728278
LRKPPSRDQW	10	Unmodified	_LRKPPSRDQW_					0	0	0		ENST00000490579.1_1_3:183995094-184008674:+|nuORF;ENST00000488401.5_1_3:183993962-184009147:+|nuORF;nc|ENSG00000145194|P0DPD6-3|ECE2;ENSG00000145194|ENST00000404464|ECE2;nc|ENSG00000145194|P0DPD6|ECE2;nc|ENSG00000284917|P0DPD8|EEF1AKMT4-ECE2	ENST00000490579.1_1_3:183995094-184008674:+|nuORF	ENST00000490579.1_1_3:183995094-184008674:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.861328125	2	641.854378	1281.6942	2.7036	0.0017353	4.2912	0.0027544	6.9949	0.0044897	641.8571318483854	117.43	1.0149	117.41	117.23	118.24	-0.024338					51	34	2	0	0	0	0.76096	1	13014	13014		41.427	7.2541	1	102430			34139	4750	22572	22582	39013	39013					0.06462401785825023
LRKPPSRDQW	10	Unmodified	_LRKPPSRDQW_					0	0	0		ENST00000490579.1_1_3:183995094-184008674:+|nuORF;ENST00000488401.5_1_3:183993962-184009147:+|nuORF;nc|ENSG00000145194|P0DPD6-3|ECE2;ENSG00000145194|ENST00000404464|ECE2;nc|ENSG00000145194|P0DPD6|ECE2;nc|ENSG00000284917|P0DPD8|EEF1AKMT4-ECE2	ENST00000490579.1_1_3:183995094-184008674:+|nuORF	ENST00000490579.1_1_3:183995094-184008674:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.852294921875	2	641.854378	1281.6942	7.1265	0.0045742	0.9889	0.00063473	8.1154	0.0052089	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.86471	1	13800	13800		30.318	1.1682	1	98705			34140	4750	22572	22582	39014	39014					0.06462401785825023
LRKQCRIRH	9	Unmodified	_LRKQCRIRH_					0	0	0		chr2:162293668-162310765|21|23.14|0.18|6.99|-|1|IFIH1,IFIH1|2	chr2:162293668-162310765|21|23.14|0.18|6.99|-|1|IFIH1,IFIH1|2	chr2:162293668-162310765|21|23.14|0.18|6.99|-|1|IFIH1,IFIH1|2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5747375488281	3	403.908497	1208.70366	0.55646	0.00022476	1.2732	0.00051425	1.8296	0.00073901	403.9089803369993	81.097	0.54895	81.24	80.907	81.456	0.14352					23	12	2	0	0	0	0.20789	1	7764	7764		37.812	23.726	1	199290			34141	309	22573	22583	39015	39015					0.10765891590358478
LRKQCRIRH	9	Unmodified	_LRKQCRIRH_					0	0	0		chr2:162293668-162310765|21|23.14|0.18|6.99|-|1|IFIH1,IFIH1|2	chr2:162293668-162310765|21|23.14|0.18|6.99|-|1|IFIH1,IFIH1|2	chr2:162293668-162310765|21|23.14|0.18|6.99|-|1|IFIH1,IFIH1|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.91064453125	3	403.908497	1208.70366	1.6372	0.00066129	2.507	0.0010126	4.1443	0.0016739	403.90940390905183	68.69	2.5103	69.075	67.299	69.809	0.38482					145	63	3	0	0	0	0.73802	1	7512	7512		37.812	1.2836	1	351280			34142	309	22573	22583	39016	39016					0.10765891590358478
LRKRIHQELKK	11	Unmodified	_LRKRIHQELKK_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.931884765625	3	483.643927	1447.90995	-0.87685	-0.00042408	-0.85015	-0.00041117	-1.727	-0.00083526	483.97783846626413	26.404	0.32208	26.471	26.356	26.678	0.066877					18	15	2	0	0	0	0.18034	1	1015	1015		11.932	3.5251	1	45622	+		34143	22878	22574	22584	39017	39017					0.20391162970463483
LRKSCPIPL	9	Unmodified	_LRKSCPIPL_					0	0	0		ENSG00000163116|ENST00000295268|STPG2	ENSG00000163116|ENST00000295268|STPG2	ENSG00000163116|ENST00000295268|STPG2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8084716796875	2	513.810062	1025.60557	-1.3833	-0.00071076	-0.62879	-0.00032308	-2.0121	-0.0010338	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.7932	1	4258	4258		23.042	0	1	1148600			34144	5767	22575	22585	39018	39018					0.09379270221802471
LRKSCPIPL	9	Unmodified	_LRKSCPIPL_					0	0	0		ENSG00000163116|ENST00000295268|STPG2	ENSG00000163116|ENST00000295268|STPG2	ENSG00000163116|ENST00000295268|STPG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8086547851562	2	513.810062	1025.60557	-0.26337	-0.00013532	-1.8299	-0.00094022	-2.0933	-0.0010755	513.8089696081398	52.202	2.125	52.215	51.482	53.607	0.012436					136	54	4	0	0	0	0.76255	2	4573	4562;4573		35.618	3.8107	1	732880			34145	5767	22575	22585	39019;39020	39020					0.09379270221802471
LRKSERGTTI	10	Unmodified	_LRKSERGTTI_					0	0	0			REV__ENSG00000153207|ENST00000648844|AHCTF1	REV__ENSG00000153207|ENST00000648844|AHCTF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.840087890625	2	580.840936	1159.66732	-0.43283	-0.00025141	-0.24886	-0.00014455	-0.68169	-0.00039595	580.8405993802119	69.859	0.92783	69.822	69.57	70.498	-0.036957					124	48	3	0	0	0	0.76096	1	6772	6772		41.427	6.2746	1	18374000	+		34146	20337	22576	22586	39021	39021					0.09387293174654587
LRKSKKLGTGK	11	Unmodified	_LRKSKKLGTGK_					0	0	0			REV__ENST00000402966.1_1_22:42092721-42093255:+|nuORF	REV__ENST00000402966.1_1_22:42092721-42093255:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.29559326171875	3	405.934706	1214.78229	-0.1044	-4.238E-05	-4.4479	-0.0018056	-4.5523	-0.0018479	405.93282735117697	36.665	1.0328	36.605	36.272	37.305	-0.060337					61	29	3	0	0	0	0.17648	1	2064	2064		15.921	7.6856	1	143830	+		34147	26269	22577	22587	39022	39022					0.18349022376446555
LRKSPPEKKLR	11	Unmodified	_LRKSPPEKKLR_					0	0	0		ENST00000530915.1_3_11:78075116-78128823:-|nuORF;ENST00000534823.1_1_11:77991605-78128766:-|nuORF;nc|ENSG00000215568|Q2WGN9|GAB4;ENSG00000033327|ENST00000361507|GAB2	ENST00000530915.1_3_11:78075116-78128823:-|nuORF	ENST00000530915.1_3_11:78075116-78128823:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.6341857910156	3	451.289261	1350.84595	0.1415	6.3855E-05	-0.21968	-9.9138E-05	-0.078182	-3.5283E-05	451.2890276630891	31.31	0.63404	31.328	31	31.634	0.01836					31	14	3	0	0	0	0.17835	1	1715	1715		16.53	6.426	1	46189			34148	892	22578	22588	39023	39023					0.18456382813542405
LRKTDKRKLPG	11	Unmodified	_LRKTDKRKLPG_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2806091308594	3	437.945494	1310.81465	0.57135	0.00025022	-2.5402	-0.0011125	-1.9689	-0.00086227	437.944245045809	16.281	0.26407	16.257	16.111	16.376	-0.024033					17	11	2	0	0	0	0.77205	1	129	129		17.167	3.0296	1	82557	+		34149	18396	22579	22589	39024	39024					0.17167809779425625
LRKTDKRKLPG	11	Unmodified	_LRKTDKRKLPG_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	437.945494	1310.81465	-1.62	-0.00070946	-0.042183	-1.8474E-05	-1.6622	-0.00072794	437.9453688852015	16.207	0.20695	16.254	16.123	16.33	0.047804	-0.013729	0.0027753	NaN	17.167	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74324	+		34150	18396	22579	22589							0.17167809779425625
LRKTDKRKLPG	11	Unmodified	_LRKTDKRKLPG_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	437.945494	1310.81465	0.017183	7.5251E-06	-2.337	-0.0010235	-2.3198	-0.0010159	437.94433058417764	16.234	0.21177	16.294	16.168	16.38	0.059269	0.025334	-0.0002397	NaN	17.167	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60231	+		34151	18396	22579	22589							0.17167809779425625
LRKTDKRKLPG	11	Unmodified	_LRKTDKRKLPG_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	437.945494	1310.81465	0.57135	0.00025022	-2.5402	-0.0011125	-1.9689	-0.00086227	437.944245045809	16.281	0.26407	16.257	16.111	16.376	-0.024033	-0.011604	-0.00050676	NaN	17.167	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82557	+		34152	18396	22579	22589							0.17167809779425625
LRKVLLGLTRG	11	Unmodified	_LRKVLLGLTRG_					0	0	0			REV__nc|ENSG00000148498|Q8TEW0-9|PARD3	REV__nc|ENSG00000148498|Q8TEW0-9|PARD3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8790893554688	2	613.408789	1224.80303	0.91299	0.00056003	3.4022	0.0020869	4.3152	0.002647	613.4105915877844	104.36	1.0038	104.48	104.28	105.28	0.11685					32	24	2	0	0	0	0.17437	1	11140	11140		22.58	19.17	1	255470	+		34153	20120	22580	22590	39025	39025					0.1996161275610575
LRKVPWYV	8	Unmodified	_LRKVPWYV_					0	0	0		ENST00000588524.5_1_19:11687529-11687667:-|nuORF;ENSG00000102575|ENST00000648477|ACP5	ENST00000588524.5_1_19:11687529-11687667:-|nuORF	ENST00000588524.5_1_19:11687529-11687667:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8209228515625	2	530.818744	1059.62294	0.64668	0.00034327	3.4627	0.0018381	4.1094	0.0021813	530.8205589668217	80.04	1.1775	80.181	79.815	80.992	0.14118					115	43	3	0	0	0	0.81548	1	7620	7620		20.482	1.1219	1	892800			34154	2010	22581	22591	39026	39026					0.09550933819105012
LRKVSINN	8	Unmodified	_LRKVSINN_					0	0	0		ENST00000495352.5_1_7:102124102-102135092:-|nuORF;ENST00000522223.1_7:102223281-102234330:-|nuORF;ENSG00000170667|ENST00000465829|RASA4B;ENSG00000105808|ENST00000262940|RASA4;nc|ENSG00000105808|O43374-2|RASA4;ENST00000446874.5_1_7:44073712-44078582:-|nuORF;ENST00000523568.1_7:102228019-102246337:-|nuORF	ENST00000495352.5_1_7:102124102-102135092:-|nuORF	ENST00000495352.5_1_7:102124102-102135092:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28765869140625	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.89291	1	10120	10120		36.447	4.4919	1	48696000			34155	2253	22582	22592	39027	39027					0.08748582399982752
LRKWKWLLH	9	Unmodified	_LRKWKWLLH_					0	0	0			REV__ENST00000533700.5_1_11:117857246-117857521:+|nuORF	REV__ENST00000533700.5_1_11:117857246-117857521:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	426.2950439453125	3	427.264387	1278.77133	-1.3725	-0.00058643	3.5837	0.0015312	2.2111	0.00094474	427.60027735880027	74.961	0.097267	74.961	74.891	74.988	0					4	2	2	0	0	0	0.20789	1	6777	6777		34.173	3.6037	1	12113	+		34156	28355	22583	22593	39028	39028					0.14309664792813237
LRKYLKYSK	9	Unmodified	_LRKYLKYSK_					0	0	0		ENSG00000160862|ENST00000292401|AZGP1	ENSG00000160862|ENST00000292401|AZGP1	ENSG00000160862|ENST00000292401|AZGP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.2481384277344	3	400.248403	1197.72338	-0.37081	-0.00014842	2.176	0.00087095	1.8052	0.00072254	400.24881333281155	24.759	1.4507	24.713	23.876	25.327	-0.04598					79	33	4	0	0	0	0.78528	1	1010	1010		29.17	7.4843	1	107720			34157	5610	22584	22594	39029	39029					0.1324254608209685
LRLALHPEL	9	Unmodified	_LRLALHPEL_					0	0	0			REV__ENSG00000139567|ENST00000388922|ACVRL1	REV__ENSG00000139567|ENST00000388922|ACVRL1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3312377929688	2	531.326934	1060.63931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.91	1	106.04	105.54	106.54	0.12742								0	0	0	0.31117	1	12913	12913		26.693	2.4902	1		+		34158	19550	22585	22595	39030	39030					0.1114201498521652
LRLALLPGQ	9	Unmodified	_LRLALLPGQ_					0	0	0		ENST00000342619.10_1_2:183943517-183943586:+|nuORF	ENST00000342619.10_1_2:183943517-183943586:+|nuORF	ENST00000342619.10_1_2:183943517-183943586:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.2965393066406	2	490.816202	979.617851	-0.61224	-0.0003005	1.9833	0.00097343	1.371	0.00067293	490.81537154944175	58.942	0.087734	58.935	58.87	58.958	-0.0074387					5	3	2	0	0	0	0.20789	1	5037	5037		25.574	7.312	1	22421			34159	10264	22586	22596	39031	39031					0.1272262995652227
LRLDKFYMLMR	11	Unmodified	_LRLDKFYMLMR_					0	0	0		ENST00000467112.5_1_21:45213150-45223652:+|nuORF;ENSG00000160214|ENST00000497547|RRP1	ENST00000467112.5_1_21:45213150-45223652:+|nuORF	ENST00000467112.5_1_21:45213150-45223652:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	496.274658203125	3	495.940475	1484.7996	-0.6632	-0.00032891	-0.39661	-0.00019669	-1.0598	-0.0005256	496.27476163701056	42.984	0.41873	42.99	42.806	43.224	0.0057487					19	11	3	0	0	0	0.7896	1	2933	2933		13.508	3.404	1	114920			34160	5567	22587	22597	39032	39032					0.07658858595573292
LRLDVKKNPVQ	11	Unmodified	_LRLDVKKNPVQ_					0	0	0		nc|ENSG00000129003|Q709C8-2|VPS13C;ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2677917480469	3	437.269866	1308.78777	-1.5729	-0.00068777	-2.9102	-0.0012725	-4.483	-0.0019603	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.74771	1	4080	4080		22.562	0.78116	1	4358700			34161	3570	22588	22598	39033	39033					0.14572701168253843
LRLFAIPQ	8	Unmodified	_LRLFAIPQ_					0	0	0		ENSG00000113262|ENST00000517717|GRM6	ENSG00000113262|ENST00000517717|GRM6	ENSG00000113262|ENST00000517717|GRM6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2979431152344	2	479.297645	956.580737	-0.46769	-0.00022416	0.69766	0.00033439	0.22997	0.00011022	479.2977943251352	57.596	1.6193	57.99	57.574	59.193	0.39407					92	39	4	0	0	0	0.90465	1	5985	5985		40.573	1.7665	1	5272200			34162	2707	22589	22599	39034	39034					0.10070958410744879
LRLFRKAM	8	Unmodified	_LRLFRKAM_					0	0	0		ENSG00000171724|ENST00000302536|VAT1L	ENSG00000171724|ENST00000302536|VAT1L	ENSG00000171724|ENST00000302536|VAT1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	517.8186645507812	2	517.818221	1033.62189	-0.046234	-2.3941E-05	1.7495	0.00090591	1.7032	0.00088197	517.8189821353725	93.25	1.5107	93.32	92.756	94.266	0.06987					100	35	4	0	0	0	0.86288	1	9660	9660		26.796	1.3459	1	1007500			34163	6702	22590	22600	39035	39035					0.10642396178582203
LRLGGMGIVP	10	Unmodified	_LRLGGMGIVP_					0	0	0		ENST00000601887.1_1_19:58640838-58666346:-|nuORF	ENST00000601887.1_1_19:58640838-58666346:-|nuORF	ENST00000601887.1_1_19:58640838-58666346:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8021240234375	2	506.802237	1011.58992	-1.4266	-0.00072302	-0.13779	-6.9831E-05	-1.5644	-0.00079285	506.8022071365967	51.979	1.1494	51.979	51.46	52.609	0					48	30	2	0	0	0	0.86201	1	4297	4297		24.203	0	1	87647			34164	14393	22591	22601	39036	39036					0.08458983704781531
LRLHTALFTK	10	Unmodified	_LRLHTALFTK_					0	0	0		nc|ENSG00000124126|Q8TCU6-3|PREX1;nc|ENSG00000124126|Q8TCU6-2|PREX1;ENSG00000124126|ENST00000371941|PREX1	nc|ENSG00000124126|Q8TCU6-3|PREX1	nc|ENSG00000124126|Q8TCU6-3|PREX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.5802917480469	3	400.580152	1198.71863	-1.9294	-0.00077288	3.1532	0.0012631	1.2238	0.00049023	400.5812185024314	112.11	1.0204	112.09	111.8	112.82	-0.019882					97	31	4	0	0	0	0.86207	1	11981	11981		24.232	0.70912	1	9176900			34165	14887	22592	22602	39037	39037					0.1272166193934936
LRLIRMFN	8	Unmodified	_LRLIRMFN_					0	0	0			REV__ENST00000368679.8_1_10:127702855-127703017:-|nuORF	REV__ENST00000368679.8_1_10:127702855-127703017:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.817626953125	2	531.815679	1061.6168	1.595	0.00084823	0.62521	0.0003325	2.2202	0.0011807	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.81548	1	8840	8840		20.482	1.1219	1	1345000	+		34166	25603	22593	22603	39038	39038					0.08846092315957321
LRLIRMFN	8	Unmodified	_LRLIRMFN_					0	0	0			REV__ENST00000368679.8_1_10:127702855-127703017:-|nuORF	REV__ENST00000368679.8_1_10:127702855-127703017:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8167724609375	2	531.815679	1061.6168	1.8637	0.00099113	0.34888	0.00018554	2.2126	0.0011767	531.8157444108199	88.686	4.0119	88.613	87.337	91.349	-0.07238					352	95	5	0	0	0	0.81724	1	9334	9334		14.664	0.88877	1	4423300	+		34167	25603	22593	22603	39039	39039					0.08846092315957321
LRLIRMFN	8	Unmodified	_LRLIRMFN_					0	0	0			REV__ENST00000368679.8_1_10:127702855-127703017:-|nuORF	REV__ENST00000368679.8_1_10:127702855-127703017:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8170166015625	2	531.815679	1061.6168	0.7269	0.00038658	1.4745	0.00078416	2.2014	0.0011707	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.81548	1	8649	8649		20.482	1.1219	1	4496300	+		34168	25603	22593	22603	39040	39040					0.08846092315957321
LRLKGKPSKQN	11	Unmodified	_LRLKGKPSKQN_					0	0	0			REV__ENSG00000130957|ENST00000375337|FBP2	REV__ENSG00000130957|ENST00000375337|FBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	423.597900390625	3	423.598094	1267.77245	-0.18424	-7.8043E-05	-0.80349	-0.00034036	-0.98773	-0.0004184	423.5976787176537	105.93	2.5264	105.91	105.23	107.75	-0.025146					222	59	5	0	0	0	0.76322	1	11557	11557		17.167	5.2344	1	5735600	+		34169	18924	22594	22604	39041	39041					0.14927834371087556
LRLKGKPSKQN	11	Unmodified	_LRLKGKPSKQN_					0	0	0			REV__ENSG00000130957|ENST00000375337|FBP2	REV__ENSG00000130957|ENST00000375337|FBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5976867675781	3	423.598094	1267.77245	2.8995	0.0012282	-3.9608	-0.0016778	-1.0614	-0.0004496	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.73893	1	11516	11516		21.78	5.063	1	6928400	+		34170	18924	22594	22604	39042	39042					0.14927834371087556
LRLKGKPSKQN	11	Unmodified	_LRLKGKPSKQN_					0	0	0			REV__ENSG00000130957|ENST00000375337|FBP2	REV__ENSG00000130957|ENST00000375337|FBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	423.5975646972656	3	423.598094	1267.77245	-1.87	-0.00079214	0.80292	0.00034011	-1.0671	-0.00045203	423.59834897722675	105.64	2.006	105.71	105.05	107.06	0.073112					176	48	5	0	0	0	0.76322	1	11170	11170		12.433	0	1	4588600	+		34171	18924	22594	22604	39043	39043					0.14927834371087556
LRLKGSSNTT	10	Unmodified	_LRLKGSSNTT_					0	0	0		ENST00000442784.1_1_1:156047142-156051420:-|nuORF;ENSG00000254726|ENST00000532414|MEX3A	ENST00000442784.1_1_1:156047142-156051420:-|nuORF	ENST00000442784.1_1_1:156047142-156051420:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.8065795898438	2	538.806562	1075.59857	-0.16838	-9.0727E-05	0.4912	0.00026466	0.32282	0.00017394	538.8067545662908	90.656	4.0484	90.725	89.127	93.176	0.069336					223	95	3	0	0	0	0.86698	1	9264	9264		28.081	1.3886	1	849020			34172	8879	22595	22605	39044	39044					0.0637962887494723
LRLKQRLVIL	10	Unmodified	_LRLKQRLVIL_					0	0	0		ENSG00000128731|ENST00000261609|HERC2;ENST00000564383.1_1_15:28525212-28544620:-|nuORF	ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.9223937988281	3	417.958963	1250.85506	2.7177	0.0011359	-1.6856	-0.0007045	1.0321	0.00043139	418.29270863949097	105.8	0.44043	105.76	105.49	105.93	-0.03714					14	10	2	0	0	0	0.37624	1	11686	11686		16.717	2.6314	1	88192			34173	3560	22596	22606	39045	39045					0.23966776169868353
LRLLATLED	9	Unmodified	_LRLLATLED_					0	0	0			REV__ENSG00000129474|ENST00000262713|AJUBA	REV__ENSG00000129474|ENST00000262713|AJUBA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3035278320312	2	522.308406	1042.60226	-0.042056	-2.1966E-05	-1.9751	-0.0010316	-2.0171	-0.0010536	522.30533950549	92.142	0.30197	92.211	91.982	92.284	0.06987					9	6	2	0	0	0	0.20789	1	9499	9499		26.693	0	1	29287	+		34174	18822	22597	22607	39046	39046					0.08266298648823067
LRLLCQGLRH	10	Unmodified	_LRLLCQGLRH_					0	0	0		nc|ENSG00000142405|P59046-5|NLRP12;nc|ENSG00000142405|P59046-4|NLRP12;nc|ENSG00000142405|P59046-3|NLRP12;nc|ENSG00000142405|P59046-6|NLRP12;nc|ENSG00000142405|P59046-2|NLRP12;ENSG00000142405|ENST00000324134|NLRP12;nc|ENSG00000142405|P59046-7|NLRP12	nc|ENSG00000142405|P59046-5|NLRP12	nc|ENSG00000142405|P59046-5|NLRP12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.5745849609375	3	403.573003	1207.69718	0.62042	0.00025038	3.8821	0.0015667	4.5025	0.0018171	403.5745077021451	83.731	2.4581	83.662	83.085	85.543	-0.069313					131	56	3	0	0	0	0.86802	1	8582	8582		27.047	3.5246	1	315140			34175	4561	22598	22608	39047	39047					0.10163953638993917
LRLLCQGLRH	10	Unmodified	_LRLLCQGLRH_					0	0	0		nc|ENSG00000142405|P59046-5|NLRP12;nc|ENSG00000142405|P59046-4|NLRP12;nc|ENSG00000142405|P59046-3|NLRP12;nc|ENSG00000142405|P59046-6|NLRP12;nc|ENSG00000142405|P59046-2|NLRP12;ENSG00000142405|ENST00000324134|NLRP12;nc|ENSG00000142405|P59046-7|NLRP12	nc|ENSG00000142405|P59046-5|NLRP12	nc|ENSG00000142405|P59046-5|NLRP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5748291015625	3	403.573003	1207.69718	0.57405	0.00023167	3.7127	0.0014983	4.2867	0.00173	403.57443061209773	82.843	3.1803	82.99	82.289	85.469	0.14694					168	73	3	0	0	0	0.76096	2	8069	8069;8098		41.427	5.109	1	1495300			34176	4561	22598	22608	39048;39049	39048					0.10163953638993917
LRLLGPISKVR	11	Unmodified	_LRLLGPISKVR_					0	0	0			REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.9471435546875	3	417.946835	1250.81868	-2.1643	-0.00090457	2.506	0.0010474	0.34173	0.00014283	417.94782275235093	15.296	0.20852	15.296	15.194	15.402	0					22	9	3	0	0	0	0.7434	1	24	24		26.75	13.792	1	182170	+		34177	17643	22599	22609	39050	39050					0.20329899273156116
LRLLGPISKVR	11	Unmodified	_LRLLGPISKVR_					0	0	0			REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.947265625	3	417.946835	1250.81868	0.012694	5.3055E-06	0.50493	0.00021103	0.51762	0.00021634	417.94700043364026	15.363	0.1698	15.421	15.35	15.519	0.057872					10	6	2	0	0	0	0.72106	1	24	24		31.068	18.111	1	87966	+		34178	17643	22599	22609	39051	39051					0.20329899273156116
LRLLGPISKVR	11	Unmodified	_LRLLGPISKVR_					0	0	0			REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.9465637207031	3	417.946835	1250.81868	0.49075	0.00020511	0.050525	2.1117E-05	0.54128	0.00022623	417.9467389341825	15.305	0.24026	15.281	15.209	15.45	-0.024207					12	8	2	0	0	0	0.77421	1	18	18		25.892	16.246	1	92058	+		34179	17643	22599	22609	39052	39052					0.20329899273156116
LRLLLPRVR	9	Unmodified	_LRLLLPRVR_					0	0	0		nc|ENSG00000166946|O95273-2|CCNDBP1;ENSG00000166946|ENST00000300213|CCNDBP1;ENST00000564630.5_1_15:43477651-43478217:+|nuORF;ENST00000566833.1_1_15:43477651-43481519:+|nuORF	nc|ENSG00000166946|O95273-2|CCNDBP1	nc|ENSG00000166946|O95273-2|CCNDBP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.556884765625	2	568.392942	1134.77133	-0.91696	-0.00052119	0.44244	0.00025148	-0.47452	-0.00026971	568.392764415248	30.138	1.1507	30.167	29.964	31.114	0.028618					36	25	2	0	0	0	0.20789	1	1991	1991		6.7355	3.5763	1	67844			34180	6251	22600	22610	39053	39053					0.20933664792823947
LRLLSSSV	8	Unmodified	_LRLLSSSV_					0	0	0		ENST00000607074.1_1_6:170581571-170582066:+|nuORF	ENST00000607074.1_1_6:170581571-170582066:+|nuORF	ENST00000607074.1_1_6:170581571-170582066:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7707214355469	2	437.77146	873.528367	-1.1766	-0.00051507	-0.34958	-0.00015304	-1.5261	-0.0006681	437.77143489998485	40.358	2.279	40.947	39.956	42.235	0.58915					112	60	4	0	0	0	0.80308	1	3339	3339		16.473	0	1	5900400			34181	14457	22601	22611	39054	39054					0.0865437527713766
LRLNNNKIRNI	11	Unmodified	_LRLNNNKIRNI_					0	0	0		ENSG00000106823|ENST00000344604|ECM2	ENSG00000106823|ENST00000344604|ECM2	ENSG00000106823|ENST00000344604|ECM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.6108093261719	3	456.612515	1366.81572	0.96641	0.00044127	-3.0189	-0.0013785	-2.0525	-0.00093721	456.61104447208845	15.674	0.40372	15.752	15.569	15.972	0.077959					29	17	2	0	0	0	0.74022	1	50	50		24.232	4.9691	1	27671			34182	2320	22602	22612	39055	39055					0.14698024148356126
LRLNNNKIRNI	11	Unmodified	_LRLNNNKIRNI_					0	0	0		ENSG00000106823|ENST00000344604|ECM2	ENSG00000106823|ENST00000344604|ECM2	ENSG00000106823|ENST00000344604|ECM2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	456.612515	1366.81572	0.72408	0.00033062	-2.7081	-0.0012365	-1.984	-0.00090591	456.6113348289443	16.075	0.2396	15.992	15.896	16.135	-0.083363	0.027975	-0.00088256	NaN	24.232	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54169			34183	2320	22602	22612							0.14698024148356126
LRLNNNKIRNI	11	Unmodified	_LRLNNNKIRNI_					0	0	0		ENSG00000106823|ENST00000344604|ECM2	ENSG00000106823|ENST00000344604|ECM2	ENSG00000106823|ENST00000344604|ECM2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	456.612515	1366.81572	-1.2883	-0.00058827	-0.63698	-0.00029085	-1.9253	-0.00087913	456.6121136115084	15.949	0.20939	15.996	15.821	16.031	0.047803	0.032243	0.0019545	NaN	24.232	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49767			34184	2320	22602	22612							0.14698024148356126
LRLNNNKIRNI	11	Unmodified	_LRLNNNKIRNI_					0	0	0		ENSG00000106823|ENST00000344604|ECM2	ENSG00000106823|ENST00000344604|ECM2	ENSG00000106823|ENST00000344604|ECM2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	456.612515	1366.81572	0.039098	1.7853E-05	-1.407	-0.00064244	-1.3679	-0.00062459	456.61163834488957	15.948	0.30113	16.007	15.931	16.232	0.059269	0.043314	0.00089973	NaN	24.232	13	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60193			34185	2320	22602	22612							0.14698024148356126
LRLPAPPPGD	10	Unmodified	_LRLPAPPPGD_					0	0	0		ENST00000485344.6_1_2:240954099-240954240:-|nuORF	ENST00000485344.6_1_2:240954099-240954240:-|nuORF	ENST00000485344.6_1_2:240954099-240954240:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7938232421875	2	516.795466	1031.57638	-0.83709	-0.0004326	-3.0347	-0.0015683	-3.8718	-0.0020009	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.77314	1	8554	8554		40.778	4.3314	1	490270			34186	12553	22603	22613	39056	39056					0.06185449197187154
LRLPPWLKTE	10	Unmodified	_LRLPPWLKTE_					0	0	0		nc|ENSG00000121897|O43766-2|LIAS;nc|ENSG00000121897|O43766-3|LIAS;ENSG00000121897|ENST00000640888|LIAS	nc|ENSG00000121897|O43766-2|LIAS	nc|ENSG00000121897|O43766-2|LIAS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2578125	3	418.251924	1251.73394	0.716	0.00029947	3.5436	0.0014821	4.2596	0.0017816	418.2548352700435	22.983	0.16323	22.409	22.334	22.497	-0.57415					5	4	2	0	0	0	0.37624	1	997	997		21.686	5.679	1	15294			34187	3200	22604	22614	39057	39057					0.11814528736545071
LRLQCLAR	8	Unmodified	_LRLQCLAR_					0	0	0		ENSG00000152611|ENST00000651391|CAPSL	ENSG00000152611|ENST00000651391|CAPSL	ENSG00000152611|ENST00000651391|CAPSL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7910461425781	2	486.792204	971.569854	-0.22528	-0.00010967	-0.32183	-0.00015666	-0.54711	-0.00026633	486.7917622292403	85.283	0.61007	85.722	85.502	86.113	0.43967					21	14	2	0	0	0	0.4196	1	9950	9950		17.365	0	1	199130			34188	5189	22605	22615	39058	39058					0.08293232764822278
LRLQRQIAL	9	Unmodified	_LRLQRQIAL_					0	0	0		nc|ENSG00000005379|O95153-2|TSPOAP1;ENSG00000005379|ENST00000343736|TSPOAP1;nc|ENSG00000005379|O95153-3|TSPOAP1	nc|ENSG00000005379|O95153-2|TSPOAP1	nc|ENSG00000005379|O95153-2|TSPOAP1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.857421875	2	555.858932	1109.70331	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.18	1	118.18	117.68	118.68	0								0	0	0	0.33676	1	12046	12046		18.324	0	1				34189	682	22606	22616	39059	39059					0.15284795142179064
LRLRPDDS	8	Unmodified	_LRLRPDDS_					0	0	0		nc|ENSG00000259207|P05106-2|ITGB3;nc|ENSG00000259207|P05106-3|ITGB3;ENSG00000259207|ENST00000559488|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.2668762207031	2	486.267073	970.519593	-1.0938	-0.00053186	1.2715	0.00061828	0.17773	8.6424E-05	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.89962	1	8893	8893		38.806	0.99462	1	1852700			34190	8913	22607	22617	39060	39060					0.03315401640657001
LRLRRWHKS	9	Unmodified	_LRLRRWHKS_					0	0	0		nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;ENSG00000253537|ENST00000518325|PCDHGA7;nc|ENSG00000253485|Q9Y5G8-2|PCDHGA5;ENSG00000253485|ENST00000518069|PCDHGA5;nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8;ENSG00000253767|ENST00000398604|PCDHGA8;nc|ENSG00000253159|O60330-2|PCDHGA12;ENSG00000253159|ENST00000252085|PCDHGA12	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;nc|ENSG00000253485|Q9Y5G8-2|PCDHGA5;nc|ENSG00000253159|O60330-2|PCDHGA12	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.92230224609375	3	417.923024	1250.74724	-1.7716	-0.00074038	0.092496	3.8656E-05	-1.6791	-0.00070173	417.92308931399344	105.49	2.9586	105.65	104.79	107.75	0.15925					261	73	4	0	0	0	0.7932	1	11169	11169		22.58	7.2465	1	33626000			34191	8861;8854;8859	22608	22618	39061	39061					0.1318982435916496
LRLRSWTEREW	11	Unmodified	_LRLRSWTEREW_					0	0	0			REV__ENST00000531012.1_1_11:74982743-74985434:-|nuORF	REV__ENST00000531012.1_1_11:74982743-74985434:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.27618408203125	3	511.275791	1530.80554	-1.5943	-0.00081511	0.80001	0.00040902	-0.79427	-0.00040609	511.27604330299584	38.894	0.7828	38.894	38.597	39.38	0					39	18	3	0	0	0	0.79224	1	2434	2434		12.957	1.5029	1	137710	+		34192	28292	22609	22619	39062	39062					0.06137416423121067
LRLTEKLD	8	Unmodified	_LRLTEKLD_					0	0	0			REV__nc|ENSG00000163808|Q9NS87-4|KIF15	REV__nc|ENSG00000163808|Q9NS87-4|KIF15	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.29486083984375	2	494.295299	986.576045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.838	1	21.903	21.403	22.403	0.064745								0	0	0	0.29596	1	622	622		35.618	0	1		+		34193	20974	22610	22620	39063	39063					0.08222029477315118
LRLTVFVGAYT	11	Unmodified	_LRLTVFVGAYT_					0	0	0		ENSG00000172638|ENST00000307998|EFEMP2;ENST00000532648.1_1_11:65634391-65635116:-|nuORF	ENSG00000172638|ENST00000307998|EFEMP2	ENSG00000172638|ENST00000307998|EFEMP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.5911865234375	3	413.908046	1238.70231	0.21485	8.8928E-05	-0.54863	-0.00022708	-0.33378	-0.00013815	413.90771450506566	18.165	0.36685	17.543	17.355	17.722	-0.62141					12	7	2	0	0	0	0.17272	1	359	359		38.714	13.646	1	104200			34194	6780	22611	22621	39064	39064					0.09250535982619112
LRLVLWKYCWF	11	Unmodified	_LRLVLWKYCWF_					0	0	0		ENST00000406780.5_1_3:107318244-107318340:+|nuORF	ENST00000406780.5_1_3:107318244-107318340:+|nuORF	ENST00000406780.5_1_3:107318244-107318340:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.6145324707031	3	509.616209	1525.8268	-1.755	-0.00089438	-1.0818	-0.00055132	-2.8368	-0.0014457	509.61555556193184	28.54	1.0683	28.54	27.927	28.995	0					107	46	3	0	0	0	0.78683	1	1163	1163		14.086	0	1	157640			34195	11276	22612	22622	39065	39065					0.08491710198291003
LRMAQFLH	8	Unmodified	_LRMAQFLH_					0	0	0			REV__nc|ENSG00000173662|Q7RTX1-2|TAS1R1	REV__nc|ENSG00000173662|Q7RTX1-2|TAS1R1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2798767089844	2	508.278929	1014.54331	2.9959	0.0015228	-0.90844	-0.00046174	2.0875	0.001061	508.27837945353787	26.338	1.1095	25.998	25.616	26.725	-0.34035					74	24	5	0	0	0	0.88915	2	1478	1465;1478		44.531	1.7077	1	2006400	+		34196	21941	22613	22623	39066;39067	39067					0.036615438734884265
LRMKFMQRGL	10	Unmodified	_LRMKFMQRGL_					0	0	0		ENSG00000135698|ENST00000258169|MPHOSPH6	ENSG00000135698|ENST00000258169|MPHOSPH6	ENSG00000135698|ENST00000258169|MPHOSPH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3585205078125	2	640.359928	1278.7053	-1.1585	-0.00074183	-0.57741	-0.00036975	-1.7359	-0.0011116	640.3594398218631	99.341	2.5092	99.527	98.68	101.19	0.18581					187	58	4	0	0	0	0.77314	1	10281	10281		40.778	0.71999	1	585260			34197	4046	22614	22624	39068	39068					0.07709764564128818
LRMPLTLARP	10	Unmodified	_LRMPLTLARP_					0	0	0			REV__ENST00000515378.5_1_4:2256939-2263707:-|nuORF	REV__ENST00000515378.5_1_4:2256939-2263707:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.3565673828125	2	584.355168	1166.69578	2.1397	0.0012504	-0.73896	-0.00043181	1.4008	0.00081854	584.3547865712267	92.649	3.0655	92.585	91.199	94.264	-0.064148					195	72	3	0	0	0	0.8545	1	9752	9752		36.447	6.129	1	743110	+		34198	28030	22615	22625	39069	39069					0.1191031955024755
LRNALLIVRNT	11	Unmodified	_LRNALLIVRNT_					0	0	0			REV__ENSG00000187775|ENST00000389840|DNAH17	REV__ENSG00000187775|ENST00000389840|DNAH17	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.3028564453125	3	428.269978	1281.7881	0.40429	0.00017314	1.4388	0.0006162	1.8431	0.00078935	428.27078044593026	64.311	0.34235	64.434	64.152	64.494	0.12397					17	13	2	0	0	0	0.17365	1	5659	5659		26.75	11.417	1	83736	+		34199	22946	22616	22626	39070	39070					0.15848120888153971
LRNKFVPVF	9	Unmodified	_LRNKFVPVF_					0	0	0			REV__ENSG00000206043|ENST00000579455|C18orf63	REV__ENSG00000206043|ENST00000579455|C18orf63	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.34033203125	2	560.337301	1118.66005	1.3844	0.00077572	4.2374	0.0023744	5.6218	0.0031501	560.3396080868185	114.62	2.2118	114.64	113.84	116.05	0.026466					86	62	2	0	0	0	0.7932	1	12607	12607		18.324	3.4595	1	96310	+		34200	23583	22617	22627	39071	39071					0.10546605364879724
LRNLIIITWEI	11	Unmodified	_LRNLIIITWEI_					0	0	0		nc|ENSG00000163606|Q8TD46-3|CD200R1;nc|ENSG00000163606|Q8TD46-2|CD200R1;ENSG00000206531|ENST00000488794|CD200R1L;nc|ENSG00000206531|Q6Q8B3|CD200R1L;nc|ENSG00000163606|Q8TD46-1|CD200R1;ENSG00000163606|ENST00000308611|CD200R1	nc|ENSG00000163606|Q8TD46-3|CD200R1	nc|ENSG00000163606|Q8TD46-3|CD200R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.9483947753906	3	461.950134	1382.82857	-1.0613	-0.00049026	-3.7269	-0.0017217	-4.7882	-0.0022119	461.94836376630775	107.84	0.21313	107.98	107.81	108.03	0.13866					10	5	2	0	0	0	0.74022	1	11580	11580		24.232	4.2013	1	146310000			34201	5833	22618	22628	39072	39072					0.15247042487908402
LRNLIIITWEI	11	Unmodified	_LRNLIIITWEI_					0	0	0		nc|ENSG00000163606|Q8TD46-3|CD200R1;nc|ENSG00000163606|Q8TD46-2|CD200R1;ENSG00000206531|ENST00000488794|CD200R1L;nc|ENSG00000206531|Q6Q8B3|CD200R1L;nc|ENSG00000163606|Q8TD46-1|CD200R1;ENSG00000163606|ENST00000308611|CD200R1	nc|ENSG00000163606|Q8TD46-3|CD200R1	nc|ENSG00000163606|Q8TD46-3|CD200R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.9486083984375	3	461.950134	1382.82857	-1.7389	-0.00080328	-2.2007	-0.0010166	-3.9396	-0.0018199	461.9491276210282	107.85	0.72025	107.89	107.25	107.97	0.036125					70	17	5	0	0	0	0.76579	1	11518	11518		18.531	0	1	82858000			34202	5833	22618	22628	39073	39073					0.15247042487908402
LRNLRNFK	8	Unmodified	_LRNLRNFK_					0	0	0			REV__ENSG00000138385|ENST00000260956|SSB;REV__ENST00000461708.1_1_2:170655414-170662397:+|nuORF	REV__ENSG00000138385|ENST00000260956|SSB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8206787109375	2	530.82235	1059.63015	0.17632	9.3593E-05	-2.7083	-0.0014376	-2.532	-0.001344	530.8207586851681	81.706	1.2049	82.133	81.753	82.958	0.42646					68	29	3	0	0	0	0.81548	1	9395	9395		20.482	0	1	1750400	+		34203	19468;27033	22619	22629	39074	39074					0.10271666419566827
LRNSRLLDF	9	Unmodified	_LRNSRLLDF_					0	0	0			REV__ENSG00000138756|ENST00000502613|BMP2K	REV__ENSG00000138756|ENST00000502613|BMP2K	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3558959960938	2	567.324922	1132.63529	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.93	1	111.05	110.55	111.55	0.11659								0	0	0	0.30778	1	11946	11946		27.882	2.3082	1		+		34204	19501	22620	22630	39075	39075					0.07427925491492715
LRPAAANGKGV	11	Unmodified	_LRPAAANGKGV_					0	0	0		ENST00000256442.9_1_5:68462858-68462948:+|nuORF	ENST00000256442.9_1_5:68462858-68462948:+|nuORF	ENST00000256442.9_1_5:68462858-68462948:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3107299804688	2	527.311815	1052.60908	0.34971	0.0001844	-0.9384	-0.00049483	-0.58869	-0.00031042	527.3113026018871	80.145	0.76048	80.561	80.168	80.928	0.41621					42	17	3	0	0	0	0.5603	1	9202	9202		47.657	13.485	1	662350			34205	9339	22621	22631	39076	39076					0.08487656320039605
LRPAAANGKGV	11	Unmodified	_LRPAAANGKGV_					0	0	0		ENST00000256442.9_1_5:68462858-68462948:+|nuORF	ENST00000256442.9_1_5:68462858-68462948:+|nuORF	ENST00000256442.9_1_5:68462858-68462948:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3115234375	2	527.311815	1052.60908	0.19557	0.00010313	-0.79724	-0.00042039	-0.60167	-0.00031727	527.3113557839335	80.052	0.71658	80.579	80.233	80.949	0.52676					40	16	3	0	0	0	0.40756	1	9223	9223		58.782	14.665	1	558180			34206	9339	22621	22631	39077	39077					0.08487656320039605
LRPAAANGKGV	11	Unmodified	_LRPAAANGKGV_					0	0	0		ENST00000256442.9_1_5:68462858-68462948:+|nuORF	ENST00000256442.9_1_5:68462858-68462948:+|nuORF	ENST00000256442.9_1_5:68462858-68462948:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	527.311815	1052.60908	0.64488	0.00034006	2.1564	0.0011371	2.8013	0.0014771	527.3142357912944	80.258	0.54591	80.399	80.233	80.779	0.14117	-0.10929	0.0028367	NaN	58.782	33	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83536			34207	9339	22621	22631							0.08487656320039605
LRPAAANGKGV	11	Unmodified	_LRPAAANGKGV_					0	0	0		ENST00000256442.9_1_5:68462858-68462948:+|nuORF	ENST00000256442.9_1_5:68462858-68462948:+|nuORF	ENST00000256442.9_1_5:68462858-68462948:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	527.311815	1052.60908	-1.2592	-0.00066398	4.3753	0.0023072	3.1162	0.0016432	527.3156669100225	80.39	0.73001	80.495	80.223	80.953	0.10527	-0.013838	0.0051768	NaN	58.782	33	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71906			34208	9339	22621	22631							0.08487656320039605
LRPAARAS	8	Unmodified	_LRPAARAS_					0	0	0		ENST00000585457.5_1_17:42253853-42254417:-|nuORF	ENST00000585457.5_1_17:42253853-42254417:-|nuORF	ENST00000585457.5_1_17:42253853-42254417:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.254150390625	2	421.253769	840.492984	-1.7494	-0.00073696	2.1586	0.00090931	0.40915	0.00017236	421.25452750849325	84.126	1.3912	84.264	83.786	85.177	0.13811					78	31	3	0	0	0	0.87064	1	8125	8125		29.15	0.89528	1	553140			34209	14149	22622	22632	39078	39078					0.06635757539982023
LRPAPKWYL	9	Unmodified	_LRPAPKWYL_					0	0	0			REV__nc|ENSG00000259024|Q96ET8|TVP23C	REV__nc|ENSG00000259024|Q96ET8|TVP23C	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.770751953125	2	572.337301	1142.66005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.204	1	69.339	68.839	69.839	0.13522								0	0	0	0.31472	1	6247	6247		25.45	3.4903	1		+		34210	30246	22623	22633	39079	39079					0.09442605364893097
LRPEPLSIK	9	Unmodified	_LRPEPLSIK_					0	0	0			REV__chr11:111879605-111882374|21|17.67|0.56|4.98|+|2|CFAP68,None|1	REV__chr11:111879605-111882374|21|17.67|0.56|4.98|+|2|CFAP68,None|1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.826416015625	2	526.826766	1051.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.551	1	71.684	71.184	72.184	0.13356								0	0	0	0.28565	1	6516	6516		36.447	3.6343	1		+		34211	15487	22624	22634	39080	39080					0.11522595265364544
LRPFHLTLLT	10	Unmodified	_LRPFHLTLLT_					0	0	0			REV__ENSG00000175595|ENST00000311895|ERCC4	REV__ENSG00000175595|ENST00000311895|ERCC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.8734130859375	2	605.868966	1209.72338	2.1175	0.0012829	3.5745	0.0021657	5.692	0.0034486	605.8709120957792	99.886	1.4328	100.22	99.77	101.2	0.33295					98	35	4	0	0	0	0.86218	1	12048	12048		32.812	11.865	1	1222300	+		34212	22076	22625	22635	39081	39081					0.12690546082126275
LRPFSVFRP	9	Unmodified	_LRPFSVFRP_					0	0	0		ENST00000215941.8_1_22:38227477-38227936:-|nuORF	ENST00000215941.8_1_22:38227477-38227936:-|nuORF	ENST00000215941.8_1_22:38227477-38227936:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.5938720703125	2	559.827101	1117.63965	0.26057	0.00014588	-3.5495	-0.0019871	-3.289	-0.0018413	559.8247465345653	18.667	0.50773	18.046	17.859	18.366	-0.62141					18	11	2	0	0	0	0.20789	1	448	448		37.159	18.835	1	168770			34213	9124	22626	22636	39082	39082					0.08553434705095242
LRPGASWP	8	Unmodified	_LRPGASWP_					0	0	0		ENST00000414282.5_1_9:139621519-139622634:-|nuORF	ENST00000414282.5_1_9:139621519-139622634:-|nuORF	ENST00000414282.5_1_9:139621519-139622634:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2413024902344	2	442.24287	882.471186	-0.73522	-0.00032514	-3.8338	-0.0016955	-4.569	-0.0020206	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.92457	1	9318	9318		47.916	3.7988	1	866900			34214	11363	22627	22637	39083	39083					0.025249527914184
LRPGFGSVLCV	11	Unmodified	_LRPGFGSVLCV_					0	0	0			REV__ENST00000427177.5_1_17:75495729-75495858:+|nuORF	REV__ENST00000427177.5_1_17:75495729-75495858:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3195190429688	2	574.318251	1146.62195	0.59156	0.00033974	1.5937	0.00091529	2.1853	0.001255	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.51007	1	9652	9652		51.193	11.94	1	1777600	+		34215	26557	22628	22638	39084	39084					0.05450351387912633
LRPGKFSLKY	10	Unmodified	_LRPGKFSLKY_					0	0	0			REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.574951171875	3	403.576519	1207.70773	-0.18746	-7.5654E-05	-3.8521	-0.0015546	-4.0395	-0.0016303	403.57480473047985	82.306	1.7649	82.372	81.231	82.996	0.065918					98	40	4	0	0	0	0.86218	2	8102	8102;8137		24.232	0	1	480930	+		34216	19626	22629	22639	39085;39086	39085					0.11218259565089284
LRPGKFSLKY	10	Unmodified	_LRPGKFSLKY_					0	0	0			REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.57476806640625	3	403.576519	1207.70773	-0.18737	-7.5617E-05	-3.9021	-0.0015748	-4.0895	-0.0016504	403.57484210158276	83.445	2.2034	83.512	82.913	85.116	0.066719					120	50	3	0	0	0	0.8608	1	8317	8317		25.126	0	1	281940	+		34217	19626	22629	22639	39087	39087					0.11218259565089284
LRPGKFSLKY	10	Unmodified	_LRPGKFSLKY_					0	0	0			REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5748291015625	3	403.576519	1207.70773	-1.8285	-0.00073793	-2.3129	-0.00093342	-4.1413	-0.0016713	403.5754909660959	80.353	1.0354	80.49	79.889	80.924	0.13702					64	31	3	0	0	0	0.86218	1	7643	7643		24.232	3.3947	1	264210	+		34218	19626	22629	22639	39088	39088					0.11218259565089284
LRPGKFSLKY	10	Unmodified	_LRPGKFSLKY_					0	0	0			REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.57464599609375	3	403.576519	1207.70773	-1.8273	-0.00073744	-2.3456	-0.00094661	-4.1728	-0.0016841	403.5755152703731	81.064	0.6007	81.209	80.845	81.446	0.14513					41	13	4	0	0	0	0.86763	1	7766	7766		25.126	0	1	520100	+		34219	19626	22629	22639	39089	39089					0.11218259565089284
LRPGKFSLKY	10	Unmodified	_LRPGKFSLKY_					0	0	0			REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5748291015625	3	403.576519	1207.70773	-1.8261	-0.00073697	-2.4452	-0.00098683	-4.2713	-0.0017238	403.5754952513638	81.706	0.84529	81.851	81.446	82.291	0.14513					69	19	4	0	0	0	0.42393	1	7839	7839		56.632	15.206	1	2366000	+		34220	19626	22629	22639	39090	39090					0.11218259565089284
LRPGKFSLKY	10	Unmodified	_LRPGKFSLKY_					0	0	0			REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.57464599609375	3	403.576519	1207.70773	-1.8238	-0.00073605	-2.6172	-0.0010562	-4.441	-0.0017923	403.575388315242	82.768	3.2423	82.923	82.261	85.503	0.15474					165	75	3	0	0	0	0.80179	2	8023	7952;8023		31.634	1.0654	1	1511600	+		34221	19626	22629	22639	39091;39092	39092					0.11218259565089284
LRPGKFSLKY	10	Unmodified	_LRPGKFSLKY_					0	0	0			REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.57470703125	3	403.576519	1207.70773	-1.7086	-0.00068956	-2.5041	-0.0010106	-4.2127	-0.0017001	403.5754460433533	81.698	1.5245	81.812	80.874	82.399	0.11426					96	35	4	0	0	0	0.80179	1	7811	7811		36.318	10.254	1	1977300	+		34222	19626	22629	22639	39093	39093					0.11218259565089284
LRPGKFSLKY	10	Unmodified	_LRPGKFSLKY_					0	0	0			REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.57476806640625	3	403.576519	1207.70773	-1.7546	-0.00070812	-2.524	-0.0010186	-4.2787	-0.0017268	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.80179	2	7991	7991;8065		29.551	0	1	1090300	+		34223	19626	22629	22639	39094;39095	39094					0.11218259565089284
LRPGKFSLKY	10	Unmodified	_LRPGKFSLKY_					0	0	0			REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.57501220703125	3	403.576519	1207.70773	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.092	1	81.197	80.697	81.697	0.10527								0	0	0	0.45132	1	7709	7709		30.569	0	1		+		34224	19626	22629	22639	39096	39096					0.11218259565089284
LRPGKFSLKY	10	Unmodified	_LRPGKFSLKY_					0	0	0			REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	REV__nc|ENSG00000140506|Q9HAT1-3|LMAN1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5746154785156	3	403.576519	1207.70773	-0.18431	-7.4383E-05	-4.1628	-0.00168	-4.3471	-0.0017544	403.57480385646164	80.099	0.84451	80.626	80.105	80.949	0.52676					63	19	4	0	0	0	0.54701	2	9264	9226;9264		41.08	3.5719	1	4093300	+		34225	19626	22629	22639	39097;39098	39098					0.11218259565089284
LRPGKKGEK	9	Unmodified	_LRPGKKGEK_					0	0	0			REV__ENSG00000188112|ENST00000341865|C6orf132	REV__ENSG00000188112|ENST00000341865|C6orf132	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.8166809082031	2	506.816733	1011.61891	0.41792	0.00021181	2.11	0.0010694	2.5279	0.0012812	506.8176154264681	60.747	0.83125	61.3	60.891	61.723	0.55323					53	25	3	0	0	0	0.25483	1	6485	6485		68.787	7.8149	1	2082900	+		34226	22979	22630	22640	39099	39099					0.1135684432541666
LRPGPPATY	9	Unmodified	_LRPGPPATY_					0	0	0			REV__ENSG00000140398|ENST00000355059|NEIL1	REV__ENSG00000140398|ENST00000355059|NEIL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.2658386230469	2	486.269084	970.523616	-1.0938	-0.00053186	-2.8649	-0.0013931	-3.9586	-0.0019249	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.64922	1	8991	8991		44.117	0	1	1852700	+		34227	19613	22631	22641	39100	39100					0.037174911343640815
LRPHTFGMS	9	Oxidation (M)	_LRPHTFGM(Oxidation (M))S_		LRPHTFGM(1)S		LRPHTFGM(42)S	0	0	1		ENST00000475482.5_1_2:9563833-9563953:+|nuORF	ENST00000475482.5_1_2:9563833-9563953:+|nuORF	ENST00000475482.5_1_2:9563833-9563953:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.2640991210938	2	531.263476	1060.5124	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.947	1	56.01	55.51	56.51	0.063725								0	0	0	0.30613	1	4705	4705		42.396	8.2236	1				34228	12324	22632	22642	39101	39101		191			-0.015436542314091639
LRPIQALGTEY	11	Unmodified	_LRPIQALGTEY_					0	0	0		ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	ENSG00000275395|ENST00000616721|FCGBP	ENSG00000275395|ENST00000616721|FCGBP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	631.35302734375	2	630.85097	1259.68739	-0.65049	-0.00041036	1.9654	0.0012399	1.3149	0.00082953	631.3546699461936	60.449	0.56546	60.449	60.216	60.781	0					35	21	3	0	0	0	0.32928	4	5303	5290;5292;5303;5306		67.494	25.098	1	128150			34229	9002	22633	22643	39102;39103;39104;39105	39104					0.06793044114624536
LRPIQALGTEY	11	Unmodified	_LRPIQALGTEY_					0	0	0		ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	ENSG00000275395|ENST00000616721|FCGBP	ENSG00000275395|ENST00000616721|FCGBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	630.8515014648438	2	630.85097	1259.68739	-0.68598	-0.00043275	1.3026	0.00082175	0.61662	0.000389	630.8511313955586	60.341	0.52102	60.372	60.14	60.661	0.0312					22	13	2	0	0	0	0.31977	1	5611	5611		70.816	31.563	1	156490			34230	9002	22633	22643	39106	39106					0.06793044114624536
LRPIQALGTEY	11	Unmodified	_LRPIQALGTEY_					0	0	0		ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	ENSG00000275395|ENST00000616721|FCGBP	ENSG00000275395|ENST00000616721|FCGBP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	630.85097	1259.68739	-0.20965	-0.00013226	0.65822	0.00041524	0.44857	0.00028298	630.8508797403615	60.399	0.48448	60.407	60.188	60.672	0.0081177	0.021439	-0.000147	NaN	70.816	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176080			34231	9002	22633	22643							0.06793044114624536
LRPKDLQSP	9	Unmodified	_LRPKDLQSP_					0	0	0			REV__nc|ENSG00000148735|Q5SXH7-3|PLEKHS1	REV__nc|ENSG00000148735|Q5SXH7-3|PLEKHS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3049926757812	2	527.306198	1052.59784	-0.62415	-0.00032912	-2.1989	-0.0011595	-2.8231	-0.0014886	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.7932	1	10056	10056		24.519	0	1	949980	+		34232	20135	22634	22644	39107	39107					0.07364834225904815
LRPLAQSPLRG	11	Unmodified	_LRPLAQSPLRG_					0	0	0		ENST00000430458.1_1_6:108616211-108666050:+|nuORF;ENSG00000135537|ENST00000368977|AFG1L	ENST00000430458.1_1_6:108616211-108666050:+|nuORF	ENST00000430458.1_1_6:108616211-108666050:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3649291992188	2	604.367121	1206.71969	3.6458	0.0022034	-4.4074	-0.0026637	-0.76167	-0.00046033	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.7434	1	12943	12943		23.523	1.5628	1	5883900			34233	4032	22635	22645	39108	39108					0.12459876308253115
LRPLDWVK	8	Unmodified	_LRPLDWVK_					0	0	0			REV__ENSG00000145217|ENST00000398516|SLC26A1	REV__ENSG00000145217|ENST00000398516|SLC26A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8087768554688	2	513.808377	1025.6022	-0.38907	-0.00019991	1.6539	0.00084981	1.2649	0.0006499	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.84341	1	3635	3635		24.203	2.2429	1	1358900	+		34234	19931	22636	22646	39109	39109					0.0904234343945518
LRPLLLIPP	9	Unmodified	_LRPLLLIPP_					0	0	0			REV__ENST00000355221.7_3_8:54745638-54754213:-|nuORF	REV__ENST00000355221.7_3_8:54745638-54754213:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3135375976562	2	516.35242	1030.69029	-0.26115	-0.00013485	-1.4072	-0.00072663	-1.6684	-0.00086148	516.35178343513	98.754	0.25884	98.976	98.789	99.047	0.22263					7	5	2	0	0	0	0.20789	1	10240	10240		18.324	5.3652	1	46894	+		34235	25372	22637	22647	39110	39110					0.17616964030071358
LRPPGKWVV	9	Unmodified	_LRPPGKWVV_					0	0	0		chr12:6944302-6944476|18|172.61|0.13|10.36|+|2|None,C12orf57|1	chr12:6944302-6944476|18|172.61|0.13|10.36|+|2|None,C12orf57|1	chr12:6944302-6944476|18|172.61|0.13|10.36|+|2|None,C12orf57|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.323974609375	2	526.324194	1050.63383	-0.53497	-0.00028157	1.5071	0.00079323	0.97214	0.00051166	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.7932	1	5179	5179		18.324	0	1	220370			34236	144	22638	22648	39111	39111					0.11054336193410563
LRPPQTVPL	9	Unmodified	_LRPPQTVPL_					0	0	0			REV__ENST00000290075.10_1_8:23423911-23424199:+|nuORF	REV__ENST00000290075.10_1_8:23423911-23424199:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8123474121094	2	510.813659	1019.61277	2.0738	0.0010593	-3.4035	-0.0017386	-1.3297	-0.00067922	510.811728357041	106.1	0.82207	106.22	105.9	106.72	0.12742					79	35	3	0	0	0	0.78536	1	12949	12949		29.15	0	1	1055000	+		34237	24654	22639	22649	39112	39112					0.10374326093892705
LRPPTAGAA	9	Unmodified	_LRPPTAGAA_					0	0	0		ENST00000503410.1_1_17:48047044-48050176:+|nuORF;ENST00000503276.2_1_17:48049963-48050176:+|nuORF	ENST00000503410.1_1_17:48047044-48050176:+|nuORF	ENST00000503410.1_1_17:48047044-48050176:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2947692871094	2	427.248152	852.481751	1.6441	0.00070243	2.9164	0.001246	4.5605	0.0019485	427.2494803762018	73.062	0.26908	73.104	72.913	73.182	0.042114					12	10	2	0	0	0	0.20789	1	7055	7055		42.396	7.1954	1	60181			34238	12877	22640	22650	39113	39113					0.049609354458425514
LRPRAKAPQG	10	Unmodified	_LRPRAKAPQG_					0	0	0		chr9:136844279-136844356|35|14.03|0.0|20.42|+|1|AJM1,AJM1|1	chr9:136844279-136844356|35|14.03|0.0|20.42|+|1|AJM1,AJM1|1	chr9:136844279-136844356|35|14.03|0.0|20.42|+|1|AJM1,AJM1|1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	547.3320922851562	2	547.333082	1092.65161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.93	1	112.9	112.4	113.4	-0.032333								0	0	0	0.45132	1	12051	12051		16.473	2.336	1				34239	527	22641	22651	39114	39114					0.108990514482457
LRPRFFSAI	9	Unmodified	_LRPRFFSAI_					0	0	0		ENST00000508686.1_3_5:72861812-72861932:+|nuORF	ENST00000508686.1_3_5:72861812-72861932:+|nuORF	ENST00000508686.1_3_5:72861812-72861932:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8307495117188	2	553.827101	1105.63965	1.454	0.00080528	4.0001	0.0022154	5.4542	0.0030207	553.8291524274036	102.21	0.72701	102.48	102.15	102.88	0.26322					38	17	3	0	0	0	0.76764	1	12425	12425		34.173	7.3764	1	559060			34240	12978	22642	22652	39115	39115					0.09105434705065818
LRPRKERKPRL	11	Unmodified	_LRPRKERKPRL_					0	0	0			REV__ENSG00000169592|ENST00000563197|INO80E	REV__ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.6460876464844	3	483.647671	1447.92118	-0.50388	-0.0002437	-2.3877	-0.0011548	-2.8916	-0.0013985	483.64638428050455	45.883	1.292	46.354	45.807	47.099	0.47139					126	31	5	0	0	0	0.79716	1	4347	4347		11.932	2.7206	1	13323000	+		34241	21588	22643	22653	39116	39116					0.2151398506462101
LRPRLLLLC	9	Unmodified	_LRPRLLLLC_					0	0	0			REV__ENST00000397881.7_2_19:10197589-10201972:+|nuORF	REV__ENST00000397881.7_2_19:10197589-10201972:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.8504028320312	2	548.854804	1095.69505	-1.7957	-0.00098556	-1.1177	-0.00061346	-2.9134	-0.001599	548.854107756805	41.735	1.0082	42.369	42.06	43.068	0.6339					60	25	4	0	0	0	0.7932	1	3692	3692		25.45	2.4077	1	1623000	+		34242	26183	22644	22654	39117	39117					0.15103524901223864
LRPRPATRRP	10	Unmodified	_LRPRPATRRP_					0	0	0			REV__ENSG00000135519|ENST00000257981|KCNH3	REV__ENSG00000135519|ENST00000257981|KCNH3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78533935546875	3	407.254662	1218.74216	1.6434	0.00066927	1.2136	0.00049426	2.857	0.0011635	407.25499798272153	33.738	0.41434	33.907	33.653	34.067	0.16971					12	9	2	0	0	0	0.37624	1	2425	2425		24.232	11.274	1	72002	+		34243	19232	22645	22655	39118	39118					0.1415352049655212
LRPSMLLF	8	Unmodified	_LRPSMLLF_					0	0	0			REV__nc|ENSG00000133317|Q96DT0-2|LGALS12	REV__nc|ENSG00000133317|Q96DT0-2|LGALS12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.78924560546875	2	488.786056	975.557558	2.6694	0.0013048	3.7932	0.0018541	6.4626	0.0031588	488.7877664062211	102.11	0.80855	102.41	102.13	102.94	0.29864					53	18	4	0	0	0	0.3646	1	12434	12434		85.359	5.4203	1	2328000	+		34244	19074	22646	22656	39119	39119					0.06880196301779051
LRPSQVRHL	9	Unmodified	_LRPSQVRHL_					0	0	0		ENSG00000243156|ENST00000441493|MICAL3;nc|ENSG00000243156|Q7RTP6-2|MICAL3;nc|ENSG00000243156|Q7RTP6-4|MICAL3;nc|ENSG00000243156|Q7RTP6-3|MICAL3;nc|ENSG00000243156|Q7RTP6-5|MICAL3	ENSG00000243156|ENST00000441493|MICAL3	ENSG00000243156|ENST00000441493|MICAL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3323974609375	2	553.333082	1104.65161	-1.4413	-0.00079751	0.24372	0.00013486	-1.1976	-0.00066265	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.78536	1	10044	10044		29.15	3.6994	1	2490200			34245	8805	22647	22657	39120	39120					0.10347051448275124
LRPTSWGLTMG	11	Unmodified	_LRPTSWGLTMG_					0	0	0			REV__ENST00000515743.5_1_4:10078742-10093271:-|nuORF	REV__ENST00000515743.5_1_4:10078742-10093271:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.8789367675781	3	406.881502	1217.62268	-1.9388	-0.00078886	-3.7381	-0.001521	-5.6769	-0.0023098	406.8798822438176	18.445	0.46535	18.489	18.293	18.758	0.044048					54	21	4	0	0	0	0.61824	1	331	331		42.338	9.5875	1	604540	+		34246	28039	22648	22658	39121	39121					0.022571460369363194
LRPVETPT	8	Unmodified	_LRPVETPT_					0	0	0		ENSG00000138379|ENST00000260950|MSTN	ENSG00000138379|ENST00000260950|MSTN	ENSG00000138379|ENST00000260950|MSTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.761474609375	2	456.761092	911.507631	-0.57833	-0.00026416	0.8151	0.00037231	0.23677	0.00010815	456.7612330284375	34.642	0.62626	34.585	34.262	34.889	-0.056381					29	13	3	0	0	0	0.73851	2	2177	2177;2189		65.803	5.5092	1	122160			34247	4291	22649	22659	39122;39123	39122					0.04833784897471105
LRPVKEMAQSH	11	Unmodified	_LRPVKEMAQSH_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3930053710938	2	648.348071	1294.68159	0.024147	1.5656E-05	0.89501	0.00058028	0.91916	0.00059593	648.3476844753262	107.27	0.36989	107.27	107.11	107.48	0					11	8	2	0	0	0	0.1746	1	11155	11155		41.427	12.257	1	80671			34248	1741	22650	22660	39124	39124					0.046036223312967195
LRPVRGGS	8	Unmodified	_LRPVRGGS_					0	0	0		ENST00000427220.5_1_3:9851662-9852079:+|nuORF	ENST00000427220.5_1_3:9851662-9852079:+|nuORF	ENST00000427220.5_1_3:9851662-9852079:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.2540588378906	2	421.253769	840.492984	0.67687	0.00028514	-0.16156	-6.8057E-05	0.51531	0.00021708	421.25351698068755	84.328	1.4775	84.259	83.718	85.196	-0.069313					81	33	3	0	0	0	0.82658	1	8678	8678		21.96	2.5999	1	949480			34249	11569	22651	22661	39125	39125					0.06635757539993392
LRPVVETG	8	Unmodified	_LRPVVETG_					0	0	0		ENST00000404930.1_1_6:106114762-106115164:+|nuORF;ENSG00000159259|ENST00000314103|CHAF1B	ENST00000404930.1_1_6:106114762-106115164:+|nuORF	ENST00000404930.1_1_6:106114762-106115164:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.75482177734375	2	435.75581	869.497067	0.19203	8.3677E-05	-3.1627	-0.0013782	-2.9707	-0.0012945	435.7543509349436	78.035	1.1687	78.598	77.699	78.868	0.56332					54	27	3	0	0	0	0.87479	1	8933	8933		30.504	6.3009	1	812270			34250	5519	22652	22662	39126	39126					0.0570980224304094
LRQALLPG	8	Unmodified	_LRQALLPG_					0	0	0			REV__nc|ENSG00000175287|Q5SRE7-3|PHYHD1	REV__nc|ENSG00000175287|Q5SRE7-3|PHYHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.2735290527344	2	434.27417	866.533787	0.35944	0.0001561	-1.798	-0.00078083	-1.4386	-0.00062473	434.2731472035985	82.213	1.3748	82.686	82.162	83.537	0.47383					62	33	3	0	0	0	0.884	2	9546	9546;9559		35.201	1.6851	1	1384700	+		34251	30048	22653	22663	39127;39128	39127					0.09518098859609836
LRQALTKTD	9	Unmodified	_LRQALTKTD_					0	0	0			REV__ENSG00000086159|ENST00000315520|AQP6	REV__ENSG00000086159|ENST00000315520|AQP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3043823242188	2	523.303655	1044.59276	1.2406	0.00064919	-1.1711	-0.00061286	0.069436	3.6336E-05	523.3029395587585	101.08	1.4079	101.12	100.73	102.14	0.044815					78	33	4	0	0	0	0.7932	1	10867	10867		20.947	2.6225	1	1032400	+		34252	16907	22654	22664	39129	39129					0.07224530363282611
LRQGKLVM	8	Unmodified	_LRQGKLVM_					0	0	0			REV__ENSG00000139722|ENST00000267202|VPS37B	REV__ENSG00000139722|ENST00000267202|VPS37B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2876892089844	2	472.78913	943.563706	0.74518	0.00035231	0.10399	4.9164E-05	0.84916	0.00040148	472.78917615516514	97.183	1.8539	97.347	96.922	98.776	0.16316					74	42	2	0	0	0	0.4196	1	10096	10096		35.201	14.719	1	433600	+		34253	19565	22655	22665	39130	39130					0.08966714533289633
LRQILSNPHN	10	Unmodified	_LRQILSNPHN_					0	0	0			REV__ENST00000376511.6_1_6:30584481-30584577:-|nuORF	REV__ENST00000376511.6_1_6:30584481-30584577:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3327026367188	2	596.333279	1190.652	0.54724	0.00032634	-1.0354	-0.00061744	-0.48816	-0.00029111	596.3325172883492	95.985	3.4694	96.39	95.216	98.686	0.40451					232	84	4	0	0	0	0.80179	1	11541	11541		39.253	1.4413	1	1225200	+		34254	25838	22656	22666	39131	39131					0.06430426377460208
LRQKGSLKNPP	11	Unmodified	_LRQKGSLKNPP_					0	0	0			REV__nc|ENSG00000275410|P35680-3|HNF1B	REV__nc|ENSG00000275410|P35680-3|HNF1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.3726196289062	2	619.372404	1236.73025	1.9872	0.0012308	-2.1821	-0.0013515	-0.19486	-0.00012069	619.3705755303217	101.25	1.7847	101.55	101.13	102.91	0.2999					90	48	3	0	0	0	0.68532	1	12313	12313		33.922	3.6039	1	2252000	+		34255	30266	22657	22667	39132	39132					0.12135858962687962
LRQKSAPAS	9	Unmodified	_LRQKSAPAS_					0	0	0		ENST00000296581.10_2_4:147096852-147104069:+|nuORF	ENST00000296581.10_2_4:147096852-147104069:+|nuORF	ENST00000296581.10_2_4:147096852-147104069:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2779541015625	2	479.277441	956.540328	-0.72512	-0.00034753	0.71589	0.00034311	-0.0092246	-4.4211E-06	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.69624	1	9494	9494		40.778	1.5253	1	1822400			34256	9744	22658	22668	39133	39133					0.06031992020314192
LRQLDSAD	8	Unmodified	_LRQLDSAD_					0	0	0		ENST00000557612.5_1_14:70793009-70793102:-|nuORF	ENST00000557612.5_1_14:70793009-70793102:-|nuORF	ENST00000557612.5_1_14:70793009-70793102:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	459.24139404296875	2	459.237981	916.461409	0.28287	0.00012991	4.0628	0.0018658	4.3457	0.0019957	459.23972142324425	47.477	1.3773	47.515	47.034	48.411	0.037731					78	43	2	0	0	0	0.88944	1	3594	3594		57.811	0	1	852740			34257	13779	22659	22669	39134	39134					-0.00016280004638247192
LRQLEALLSS	10	Unmodified	_LRQLEALLSS_					0	0	0		ENST00000596279.1_1_19:17337742-17339154:+|nuORF;ENST00000594283.5_1_19:17337742-17339731:+|nuORF;ENSG00000099330|ENST00000215061|OCEL1	ENST00000596279.1_1_19:17337742-17339154:+|nuORF	ENST00000596279.1_1_19:17337742-17339154:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.8352661132812	2	565.332413	1128.65027	0.63692	0.00036007	4.1183	0.0023282	4.7552	0.0026883	565.3346677979297	20.552	0.4492	19.923	19.627	20.076	-0.6296					13	9	2	0	0	0	0.37624	1	660	660		26.693	8.4308	1	79794			34258	1756	22660	22670	39135	39135					0.09109372568855179
LRQLFKLMA	9	Unmodified	_LRQLFKLMA_					0	0	0		ENSG00000060642|ENST00000674202|PIGV	ENSG00000060642|ENST00000674202|PIGV	ENSG00000060642|ENST00000674202|PIGV	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3410034179688	2	560.338987	1118.66342	-1.4185	-0.00079484	3.8922	0.0021809	2.4736	0.0013861	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	1	12460	12460		23.042	4.7804	1	4071000			34259	1065	22661	22671	39136	39136					0.10883532147249753
LRQLNNGVKRR	11	Unmodified	_LRQLNNGVKRR_					0	0	0			REV__ENSG00000080986|ENST00000261597|NDC80	REV__ENSG00000080986|ENST00000261597|NDC80	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9427490234375	3	451.944376	1352.8113	-1.2962	-0.0005858	-1.4594	-0.00065959	-2.7556	-0.0012454	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.76892	1	4316	4316		17.833	0	1	734340	+		34260	16813	22662	22672	39137	39137					0.149005597254245
LRQLPQRW	8	Unmodified	_LRQLPQRW_					0	0	0			REV__ENSG00000198326|ENST00000380585|TMEM239	REV__ENSG00000198326|ENST00000380585|TMEM239	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.8505859375	2	548.82235	1095.63015	-2.7437	-0.0015058	-3.9906	-0.0021901	-6.7343	-0.0036959	548.819952261368	40.68	0.26435	41.072	40.901	41.165	0.39209					12	7	2	0	0	0	0.4196	1	3485	3485		25.45	1.2474	1	765250	+		34261	23317	22663	22673	39138	39138					0.0861566641956415
LRQLRMWKM	9	Unmodified	_LRQLRMWKM_					0	0	0		ENST00000557837.1_1_15:89060105-89074648:-|nuORF;ENSG00000140543|ENST00000268148|DET1;nc|ENSG00000173867|Q7L5Y6-2|DET1	ENST00000557837.1_1_15:89060105-89074648:-|nuORF	ENST00000557837.1_1_15:89060105-89074648:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	631.35693359375	2	631.354645	1260.69474	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.637	1	60.625	60.125	61.125	-0.012203								0	0	0	0.27974	1	5618	5618		38.806	3.6541	1				34262	4445	22664	22674	39139	39139					0.07481781909655183
LRQRLRKAQGQ	11	Unmodified	_LRQRLRKAQGQ_					0	0	0		ENSG00000176531|ENST00000292140|PHLDB3;nc|ENSG00000176531|Q6NSJ2-2|PHLDB3	ENSG00000176531|ENST00000292140|PHLDB3	ENSG00000176531|ENST00000292140|PHLDB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.28564453125	3	451.944376	1352.8113	-0.57992	-0.00026209	-1.7477	-0.00078988	-2.3277	-0.001052	451.9434686963914	54.414	0.67409	54.364	54.07	54.744	-0.049271					51	21	3	0	0	0	0.71207	1	4522	4522		29.551	2.801	1	176770			34263	7086	22665	22675	39140	39140					0.14900559725469975
LRQVGVAGK	9	Unmodified	_LRQVGVAGK_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.28973388671875	2	464.290351	926.566149	1.8464	0.00085725	-1.5871	-0.00073688	0.25925	0.00012037	464.28948357873554	94.132	2.3405	94.073	92.594	94.934	-0.059212					106	55	3	0	0	0	0.76764	1	9998	9998		34.173	5.023	1	300610			34264	4108	22666	22676	39141	39141					0.0999288626261432
LRQYFDIN	8	Unmodified	_LRQYFDIN_					0	0	0		ENSG00000140836|ENST00000268489|ZFHX3;chr16:73456258-73680180|53|17.49|0.14|6.93|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73318336-73456003|47|12.38|0.07|7.55|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73257136-73318240|51|12.71|0.0|20.28|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73143831-73257047|49|21.06|0.1|7.71|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73131094-73143752|54|16.8|0.2|6.36|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73093598-73130968|46|12.0|0.08|7.25|-|ENST00000641206|ZFHX3,ZFHX3;nc|ENSG00000140836|Q15911-2|ZFHX3;chr16:72950965-73058530|60|21.05|0.31|6.07|-|ENST00000397992|ZFHX3,ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.7835083007812	2	534.777274	1067.53999	0.096435	5.1571E-05	0.5533	0.00029589	0.64973	0.00034746	535.2790055793054	78.597	0.29736	79.007	78.802	79.1	0.4106					8	6	2	0	0	0	0.4196	1	8978	8978		44.117	0	1	71305			34265	208	22667	22677	39142	39142					0.008925723004722386
LRRAAPGA	8	Unmodified	_LRRAAPGA_					0	0	0			REV__ENST00000283921.4_1_7:27211779-27213458:-|nuORF	REV__ENST00000283921.4_1_7:27211779-27213458:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2479553222656	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.45	1	116.43	115.93	116.93	-0.02433								0	0	0	0.30784	1	12896	12896		14.664	0	1		+		34266	24620	22668	22678	39143	39143					0.06959774885547176
LRRALPVAGA	10	Unmodified	_LRRALPVAGA_					0	0	0			REV__nc|ENSG00000169247|Q8TF17-5|SH3TC2	REV__nc|ENSG00000169247|Q8TF17-5|SH3TC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.3240356445312	2	512.324725	1022.6349	0.9839	0.00050408	-1.2426	-0.00063659	-0.25866	-0.00013252	512.324091379389	21.2	0.73422	20.741	20.395	21.129	-0.4591					30	17	2	0	0	0	0.8608	1	753	753		34.173	1.3601	1	143260	+		34267	21563	22669	22679	39144	39144					0.12448550562305627
LRRASLPRPCP	11	Unmodified	_LRRASLPRPCP_					0	0	0			REV__ENST00000241502.8_1_3:197476783-197476846:+|nuORF	REV__ENST00000241502.8_1_3:197476783-197476846:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5815124511719	3	422.580158	1264.71864	0.70592	0.00029831	3.6463	0.0015409	4.3523	0.0018392	422.58159999345827	97.435	2.4101	97.596	96.789	99.199	0.16074					159	55	4	0	0	0	0.7434	1	10085	10085		15.921	0	1	461560	+		34268	24229	22670	22680	39145	39145					0.096873386677089
LRREKLSQYWA	11	Unmodified	_LRREKLSQYWA_					0	0	0			REV__ENST00000333010.6_1_5:147040929-147162182:-|nuORF	REV__ENST00000333010.6_1_5:147040929-147162182:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.9361572265625	3	483.936887	1448.78883	-1.0481	-0.00050723	-0.058824	-2.8467E-05	-1.107	-0.0005357	483.93680675261817	43.021	1.2673	42.985	42.56	43.828	-0.035816					88	29	5	0	0	0	0.72374	1	3318	3318		27.644	4.266	1	1751300	+		34269	25145	22671	22681	39146	39146					0.08238915537185676
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9745788574219	3	478.973384	1433.89832	-1.7043	-0.00081634	3.2384	0.0015511	1.5341	0.00073477	478.9749318699197	42.97	1.9218	42.97	41.976	43.898	0					105	47	4	0	0	0	0.7896	1	3021	3021		13.508	4.2961	1	335660			34270	1516	22672	22682	39147	39147					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3085632324219	3	478.973384	1433.89832	-1.6788	-0.00080411	3.2689	0.0015657	1.5901	0.0007616	479.3090926937771	44.658	1.9564	44.658	43.823	45.779	0					118	47	4	0	0	0	0.79224	1	3316	3316		12.957	3.7457	1	394570			34271	1516	22672	22682	39148	39148					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97406005859375	3	478.973384	1433.89832	-1.0377	-0.00049701	2.1803	0.0010443	1.1426	0.00054727	478.97440370036395	43.258	1.9554	43.222	42.189	44.144	-0.035816					117	46	4	0	0	0	0.81021	2	3392	3392;3420		9.2118	3.1005	1	472330			34272	1516	22672	22682	39149;39150	39149					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3075866699219	3	478.973384	1433.89832	-0.79395	-0.00038028	3.0915	0.0014807	2.2975	0.0011005	478.9747699681175	46.852	2.0236	46.823	45.583	47.607	-0.028782					130	52	3	0	0	0	0.77803	1	3769	3769		15.921	6.7089	1	237090			34273	1516	22672	22682	39151	39151					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.974853515625	3	478.973384	1433.89832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.979	1	58.948	58.448	59.448	-0.030888								0	0	0	0.56276	1	5505	5505		14.086	4.8742	1				34274	1516	22672	22682	39152	39152					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.30926513671875	3	478.973384	1433.89832	-0.91417	-0.00043786	2.5827	0.001237	1.6685	0.00079918	478.9746832148069	43.078	1.9449	43.084	42.148	44.093	0.0057487					98	52	3	0	0	0	0.72374	1	2964	2964		27.644	8.3812	1	330000			34275	1516	22672	22682	39153	39153					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97393798828125	3	478.973384	1433.89832	-0.90639	-0.00043414	3.3972	0.0016272	2.4909	0.0011931	479.3093505928146	47.758	1.3305	47.777	47.26	48.59	0.018967					62	39	2	0	0	0	0.7896	1	3680	3680		13.508	0	1	302610			34276	1516	22672	22682	39154	39154					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3095397949219	3	478.973384	1433.89832	0.29105	0.00013941	2	0.00095795	2.2911	0.0010974	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.72374	2	3314	3314;3431		27.644	18.845	1	395190			34277	1516	22672	22682	39155;39156	39155					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3085632324219	3	478.973384	1433.89832	0.30578	0.00014646	2.3764	0.0011382	2.6822	0.0012847	478.97445511920006	47.863	1.3107	47.901	47.243	48.554	0.037731					72	41	3	0	0	0	0.76579	2	3609	3606;3609		18.531	5.0231	1	244030			34278	1516	22672	22682	39157;39158	39158					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3092346191406	3	478.973384	1433.89832	0.32204	0.00015425	2.3016	0.0011024	2.6237	0.0012567	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.76579	1	3909	3909		18.531	9.3192	1	307830			34279	1516	22672	22682	39159	39159					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9754333496094	3	478.973384	1433.89832	0.34157	0.0001636	2.1071	0.0010093	2.4487	0.0011729	478.9743151753571	51.804	1.1678	51.863	51.373	52.541	0.059719					70	37	2	0	0	0	0.77803	1	4105	4105		15.921	6.2745	1	347520			34280	1516	22672	22682	39160	39160					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9743347167969	3	478.973384	1433.89832	0.35245	0.00016881	1.7746	0.00084999	2.127	0.0010188	478.9741095971511	52.816	1.6716	52.886	52.36	54.032	0.070713					123	47	3	0	0	0	0.80813	1	4247	4247		9.6461	3.6451	1	295530			34281	1516	22672	22682	39161	39161					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9755859375	3	478.973384	1433.89832	0.41435	0.00019846	1.9079	0.00091386	2.3223	0.0011123	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.76892	1	5276	5276		17.833	8.6213	1	131420			34282	1516	22672	22682	39162	39162					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30926513671875	3	478.973384	1433.89832	-0.20548	-9.8418E-05	2.5121	0.0012032	2.3066	0.0011048	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.79945	1	3367	3367		11.455	3.0474	1	468190			34283	1516	22672	22682	39163	39163					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97454833984375	3	478.973384	1433.89832	-0.3619	-0.00017334	3.0729	0.0014719	2.711	0.0012985	478.9747142061381	50.735	1.3969	50.643	50.107	51.504	-0.091797					89	39	3	0	0	0	0.81407	1	4017	4017		8.4073	0.37291	1	284170			34284	1516	22672	22682	39164	39164					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3075256347656	3	478.973384	1433.89832	-0.41434	-0.00019846	3.0207	0.0014469	2.6064	0.0012484	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.78683	1	4101	4101		14.086	0.57807	1	341610			34285	1516	22672	22682	39165	39165					0.19872965947115517
LRRFLSRIKFV	11	Unmodified	_LRRFLSRIKFV_					0	0	0		ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	ENSG00000084444|ENST00000197268|FAM234B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	478.973384	1433.89832	-0.88264	-0.00042276	2.902	0.00139	2.0193	0.00096721	479.30906204534347	60.093	0.63088	60.187	59.83	60.461	0.094059	0.086926	0.0010071	NaN	17.833	45	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	148840			34286	1516	22672	22682							0.19872965947115517
LRRFYALI	8	Unmodified	_LRRFYALI_					0	0	0			REV__ENSG00000160801|ENST00000449590|PTH1R	REV__ENSG00000160801|ENST00000449590|PTH1R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.322998046875	2	526.324194	1050.63383	-0.67072	-0.00035302	1.8472	0.00097224	1.1765	0.00061923	526.3250687277414	64.714	3.1276	64.752	62.47	65.598	0.037849					207	130	2	0	0	0	0.86288	1	5779	5779		26.796	1.3459	1	198930	+		34287	20742	22673	22683	39166	39166					0.11054336193410563
LRRGKQRSKH	10	Unmodified	_LRRGKQRSKH_					0	0	0		ENST00000518642.5_1_8:133584556-133590680:-|nuORF	ENST00000518642.5_1_8:133584556-133590680:-|nuORF	ENST00000518642.5_1_8:133584556-133590680:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3860473632812	2	633.386711	1264.75887	-0.76647	-0.00048547	-1.6979	-0.0010754	-2.4644	-0.0015609	633.3855124347002	47.014	1.2908	47.485	47.137	48.428	0.47139					73	31	3	0	0	0	0.86582	1	4473	4473		27.047	0	1	789840			34288	13118	22674	22684	39167	39167					0.13708021382490188
LRRGLMVFE	9	Unmodified	_LRRGLMVFE_					0	0	0		ENST00000307145.3_2_15:31668713-31668776:+|nuORF	ENST00000307145.3_2_15:31668713-31668776:+|nuORF	ENST00000307145.3_2_15:31668713-31668776:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8197021484375	2	560.818418	1119.62228	1.7672	0.00099109	0.72105	0.00040438	2.4883	0.0013955	560.818662901512	92.32	2.1996	92.766	91.879	94.079	0.44661					115	51	3	0	0	0	0.72402	1	10971	10971		38.806	0.99462	1	230230			34289	9868	22675	22685	39168	39168					0.06725771107767287
LRRGLYYL	8	Unmodified	_LRRGLYYL_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3;ENST00000513232.1_1_5:94857997-94861145:-|nuORF	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	527.310546875	2	527.313826	1052.6131	-0.12868	-6.7856E-05	-4.176	-0.0022021	-4.3047	-0.0022699	527.3116503059466	81.714	0.6825	81.859	81.529	82.211	0.14513					34	15	3	0	0	0	0.94132	1	7836	7836		54.765	4.7401	1	201060			34290	8303	22676	22686	39169	39169					0.08889745813735317
LRRGRRRAR	9	Unmodified	_LRRGRRRAR_					0	0	0		ENST00000326474.4_2_3:159943299-159943401:+|nuORF	ENST00000326474.4_2_3:159943299-159943401:+|nuORF	ENST00000326474.4_2_3:159943299-159943401:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3804321289062	2	598.887213	1195.75987	-0.19582	-0.00011727	-3.6176	-0.0021665	-3.8134	-0.0022838	598.8834369079352	44.015	1.2903	43.988	43.056	44.346	-0.026764					44	30	2	0	0	0	0.20789	1	3384	3384		21.96	5.4867	1	65214			34291	10079	22677	22687	39170	39170					0.16982280542038097
LRRGSPTN	8	Unmodified	_LRRGSPTN_					0	0	0			REV__ENST00000574380.5_1_16:3508085-3533604:+|nuORF	REV__ENST00000574380.5_1_16:3508085-3533604:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7548522949219	2	450.754133	899.493713	-1.4711	-0.00066312	1.4399	0.00064903	-0.031247	-1.4085E-05	450.7547246648738	79.827	2.1578	79.926	78.179	80.337	0.098701					99	70	2	0	0	0	0.89494	1	7526	7526		37.159	3.6435	1	155440	+		34292	28926	22678	22688	39171	39171					0.039945521890217606
LRRGTKHW	8	Unmodified	_LRRGTKHW_					0	0	0			REV__ENST00000518806.1_1_8:142187376-142187526:+|nuORF	REV__ENST00000518806.1_1_8:142187376-142187526:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3092651367188	2	527.306867	1052.59918	0.75273	0.00039692	-3.0453	-0.0016058	-2.2926	-0.0012089	527.3054859582556	65.976	1.4433	66.362	65.959	67.402	0.38581					53	39	2	0	0	0	0.91472	2	7198	7198;7212		47.916	5.0513	1	847580	+		34293	28067	22679	22689	39172;39173	39172					0.07498513105315396
LRRGWLLLPL	10	Unmodified	_LRRGWLLLPL_					0	0	0			REV__ENST00000496925.5_1_3:184024263-184025148:+|nuORF	REV__ENST00000496925.5_1_3:184024263-184025148:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	618.9027099609375	2	618.9006	1235.78665	-0.70301	-0.00043509	4.3137	0.0026698	3.6107	0.0022347	618.9030490497685	88.787	0.85529	89.258	89.075	89.93	0.47068					60	20	4	0	0	0	0.85939	1	10526	10526		23.042	0.46283	1	1768000	+		34294	27758	22680	22690	39174	39174					0.17818531590023667
LRRHVMLE	8	Unmodified	_LRRHVMLE_					0	0	0			REV__nc|ENSG00000104774|O00754-2|MAN2B1	REV__nc|ENSG00000104774|O00754-2|MAN2B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.305419921875	2	527.302936	1052.59132	-0.62415	-0.00032912	3.9884	0.0021031	3.3642	0.001774	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.87922	1	10148	10148		31.955	2.8053	1	949980	+		34295	17471	22681	22691	39175	39175					0.06712617793550635
LRRHVMLE	8	Unmodified	_LRRHVMLE_					0	0	0			REV__nc|ENSG00000104774|O00754-2|MAN2B1	REV__nc|ENSG00000104774|O00754-2|MAN2B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.3054809570312	2	527.302936	1052.59132	1.242	0.00065492	2.5257	0.0013318	3.7677	0.0019867	527.3046705662339	99.127	1.5298	99.174	98.632	100.16	0.047523					112	35	4	0	0	0	0.91977	1	10608	10608		45.952	8.7928	1	1549600	+		34296	17471	22681	22691	39176	39176					0.06712617793550635
LRRIGRFSE	9	Unmodified	_LRRIGRFSE_					0	0	0		ENSG00000142875|ENST00000370685|PRKACB;nc|ENSG00000142875|P22694-8|PRKACB;ENST00000536649.5_1_19:14208073-14223129:-|nuORF;nc|ENSG00000142875|P22694-4|PRKACB;nc|ENSG00000142875|P22694-3|PRKACB;nc|ENSG00000072062|P17612-2|PRKACA;nc|ENSG00000142875|P22694|PRKACB;ENSG00000072062|ENST00000308677|PRKACA;nc|ENSG00000142875|P22694-5|PRKACB;nc|ENSG00000142875|P22694-7|PRKACB;nc|ENSG00000142875|P22694-6|PRKACB;nc|ENSG00000142875|P22694-9|PRKACB;chr1:84165013-84175033|17|12.88|0.41|4.98|+|ENST00000413538|PRKACB,PRKACB;nc|ENSG00000142875|P22694-10|PRKACB	ENSG00000142875|ENST00000370685|PRKACB;nc|ENSG00000142875|P22694-10|PRKACB	nc|ENSG00000142875|P22694-10|PRKACB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.8330688476562	2	567.330539	1132.64652	2.9387	0.0016672	-3.9731	-0.0022541	-1.0344	-0.00058686	567.3283043760771	116.2	1.239	116.18	115.69	116.93	-0.02433					56	40	2	0	0	0	0.20789	1	12927	12927		32.812	4.9302	1	94442			34297	4587;14971	22682	22692	39177	39177					0.0855074758567298
LRRIKLRCLHK	11	Unmodified	_LRRIKLRCLHK_					0	0	0			REV__ENSG00000146809|ENST00000451215|ASB15	REV__ENSG00000146809|ENST00000451215|ASB15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.30975341796875	3	479.310002	1434.90818	-0.63549	-0.0003046	-1.5532	-0.00074449	-2.1887	-0.0010491	479.30917580991905	52.514	1.6934	52.49	51.325	53.018	-0.023849					51	40	2	0	0	0	0.79224	1	4704	4704		12.957	1.3216	1	106560	+		34298	20032	22683	22693	39178	39178					0.20811830680872845
LRRIKLRCLHK	11	Unmodified	_LRRIKLRCLHK_					0	0	0			REV__ENSG00000146809|ENST00000451215|ASB15	REV__ENSG00000146809|ENST00000451215|ASB15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30657958984375	3	479.310002	1434.90818	-0.67452	-0.00032331	-1.3247	-0.00063495	-1.9992	-0.00095826	479.3093558580906	59.578	0.87093	59.579	59.126	59.997	0.00051117					40	27	2	0	0	0	0.77511	1	5111	5111		16.53	3.0219	1	137950	+		34299	20032	22683	22693	39179	39179					0.20811830680872845
LRRILELKAL	10	Unmodified	_LRRILELKAL_					0	0	0			REV__ENST00000549711.5_1_12:112487373-112518932:-|nuORF	REV__ENST00000549711.5_1_12:112487373-112518932:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	612.8796997070312	2	612.911165	1223.80778	-0.12406	-7.6039E-05	-3.5769	-0.0021923	-3.701	-0.0022684	612.9074857535038	105.01	0.46123	105.01	104.87	105.33	0					16	10	2	0	0	0	0.37624	1	10832	10832		27.882	0	1	211040	+		34300	17861	22684	22694	39180	39180					0.2048249689887598
LRRKGFHIKVI	11	Unmodified	_LRRKGFHIKVI_					0	0	0		ENSG00000185101|ENST00000332826|ANO9;nc|ENSG00000185101|A1A5B4-3|ANO9;ENST00000528927.5_1_11:431754-441926:-|nuORF;ENST00000532094.5_1_11:433312-441926:-|nuORF	ENSG00000185101|ENST00000332826|ANO9	ENSG00000185101|ENST00000332826|ANO9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7270202636719	3	456.297979	1365.87211	-0.13463	-6.1433E-05	2.1241	0.00096922	1.9895	0.00090779	456.2988823332031	76.137	0.64342	76.706	76.433	77.077	0.56836					33	16	3	0	0	0	0.17784	1	8713	8713		17.167	8.3674	1	312760			34301	7679	22685	22695	39181	39181					0.20380696775669094
LRRKKPLP	8	Unmodified	_LRRKKPLP_					0	0	0		ENSG00000198722|ENST00000635942|UNC13B;nc|ENSG00000198722|O14795|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3455810546875	2	504.345461	1006.67637	0.11336	5.7171E-05	-0.44983	-0.00022687	-0.33648	-0.0001697	504.3451867946114	55.153	1.8423	55.554	54.023	55.866	0.40101					89	43	3	0	0	0	0.86288	1	5632	5632		26.796	1.3459	1	1856800			34302	8315	22686	22696	39182	39182					0.17329731321649433
LRRKKPLP	8	Unmodified	_LRRKKPLP_					0	0	0		ENSG00000198722|ENST00000635942|UNC13B;nc|ENSG00000198722|O14795|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34539794921875	2	504.345461	1006.67637	-0.55637	-0.0002806	0.50122	0.00025279	-0.055148	-2.7814E-05	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.81548	2	5730	5706;5730		20.482	1.1219	1	1905800			34303	8315	22686	22696	39183;39184	39184					0.17329731321649433
LRRKKPLP	8	Unmodified	_LRRKKPLP_					0	0	0		ENSG00000198722|ENST00000635942|UNC13B;nc|ENSG00000198722|O14795|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.34478759765625	2	504.345461	1006.67637	0.37851	0.0001909	-0.71644	-0.00036133	-0.33793	-0.00017043	504.3450503233635	54.756	1.9259	55.325	53.982	55.908	0.56836					89	45	3	0	0	0	0.9159	1	5670	5670		44.531	16.277	1	1764400			34304	8315	22686	22696	39185	39185					0.17329731321649433
LRRKKPLP	8	Unmodified	_LRRKKPLP_					0	0	0		ENSG00000198722|ENST00000635942|UNC13B;nc|ENSG00000198722|O14795|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3449401855469	2	504.345461	1006.67637	0.93532	0.00047173	-0.81966	-0.00041339	0.11566	5.8333E-05	504.3449357960576	55.64	0.72586	56.209	55.824	56.55	0.56836					45	18	3	0	0	0	0.81548	4	5778	5697;5719;5731;5778		26.796	7.4361	1	1733500			34305	8315	22686	22696	39186;39187;39188;39189	39189					0.17329731321649433
LRRKKRSRRHG	11	Unmodified	_LRRKKRSRRHG_					0	0	0			REV__nc|ENSG00000177679|A6NNA2|SRRM3	REV__nc|ENSG00000177679|A6NNA2|SRRM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.97479248046875	3	483.974781	1448.90251	0.065798	3.1845E-05	-0.044735	-2.1651E-05	0.021063	1.0194E-05	483.9747538518178	16.427	0.37356	16.486	16.338	16.711	0.059269					42	15	4	0	0	0	0.75457	1	151	151		21.032	6.9462	1	767320	+		34306	22224	22687	22697	39190	39190					0.19601868213430862
LRRKQHSLLKR	11	Unmodified	_LRRKQHSLLKR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9726257324219	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.373	1	47.392	46.892	47.892	0.018967								0	0	0	0.56276	1	3539	3539		9.2118	0	1				34307	2828	22688	22698	39191	39191					0.20593698547577333
LRRKRLLP	8	Unmodified	_LRRKRLLP_					0	0	0		ENSG00000164066|ENST00000335251|INTU;nc|ENSG00000164066|Q9ULD6-4|INTU;nc|ENSG00000164066|Q9ULD6-2|INTU;nc|ENSG00000164066|Q9ULD6-3|INTU;chr4:127623491-127643521|29|10.31|0.46|4.49|+|ENST00000504491|INTU,INTU	ENSG00000164066|ENST00000335251|INTU	ENSG00000164066|ENST00000335251|INTU	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3593139648438	2	526.364185	1050.71382	-1.5421	-0.00081169	-4.0982	-0.0021571	-5.6402	-0.0029688	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.81548	1	2135	2135		20.482	5.8177	1	788470			34308	5908	22689	22699	39192	39192					0.19048822587274117
LRRKRRRFYAR	11	Unmodified	_LRRKRRRFYAR_					0	0	0		ENST00000565493.1_1_20:34637734-34637854:-|nuORF	ENST00000565493.1_1_20:34637734-34637854:-|nuORF	ENST00000565493.1_1_20:34637734-34637854:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3234252929688	3	526.662314	1576.96511	-0.33544	-0.00017666	-2.6644	-0.0014032	-2.9998	-0.0015799	526.9949298667966	54.452	0.18057	54.403	54.273	54.454	-0.049271					7	5	2	0	0	0	0.18258	1	4498	4498		8.7993	5.7733	1	69844			34309	13914	22690	22700	39193	39193					0.19971014281622956
LRRKRRRFYAR	11	Unmodified	_LRRKRRRFYAR_					0	0	0		ENST00000565493.1_1_20:34637734-34637854:-|nuORF	ENST00000565493.1_1_20:34637734-34637854:-|nuORF	ENST00000565493.1_1_20:34637734-34637854:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	526.662314	1576.96511	-0.18982	-9.9973E-05	-4.8118	-0.0025342	-5.0016	-0.0026342	526.6601048248114	54.474	0.15705	54.529	54.457	54.614	0.055614	0.063347	-0.0020113	NaN	8.7993	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52625			34310	13914	22690	22700							0.19971014281622956
LRRLAAGR	8	Unmodified	_LRRLAAGR_					0	0	0			REV__ENST00000320017.10_1_3:47459280-47460886:-|nuORF	REV__ENST00000320017.10_1_3:47459280-47460886:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2640075683594	2	456.796135	911.577717	-0.13228	-6.0426E-05	-3.8544	-0.0017607	-3.9867	-0.0018211	456.79295307829017	81.791	0.59462	81.856	81.491	82.086	0.064384					17	13	2	0	0	0	0.4196	1	8029	8029		17.365	4.4058	1	16639	+		34311	24494	22691	22701	39194	39194					0.11839128076599081
LRRLAGTSD	9	Unmodified	_LRRLAGTSD_					0	0	0			REV__ENST00000494550.5_1_6:33263795-33265760:-|nuORF	REV__ENST00000494550.5_1_6:33263795-33265760:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7798156738281	2	494.780348	987.546142	-1.0037	-0.00049663	0.6697	0.00033135	-0.33405	-0.00016528	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.76764	1	8450	8450		34.173	2.2177	1	265620	+		34312	27720	22692	22702	39195	39195					0.051870905319901794
LRRLEGSGG	9	Unmodified	_LRRLEGSGG_					0	0	0			REV__ENST00000300571.6_1_16:19871173-19871527:-|nuORF	REV__ENST00000300571.6_1_16:19871173-19871527:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7668151855469	2	472.76724	943.519927	-0.5652	-0.00026721	0.45292	0.00021413	-0.11228	-5.3082E-05	472.76729274425634	81.448	2.2568	81.505	80.558	82.815	0.057816					110	51	3	0	0	0	0.78983	1	8112	8112		27.882	1.1893	1	178400	+		34313	24750	22693	22703	39196	39196					0.04590821360534392
LRRLKQTKDP	10	Unmodified	_LRRLKQTKDP_					0	0	0		ENSG00000120370|ENST00000367763|GORAB;nc|ENSG00000120370|Q5T7V8-2|GORAB	ENSG00000120370|ENST00000367763|GORAB	ENSG00000120370|ENST00000367763|GORAB	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.8829345703125	2	627.885678	1253.7568	NaN	NaN	NaN	NaN	NaN	NaN	NaN	120	1	120.02	119.52	120.52	0.017624								0	0	0	0.45132	1	13199	13199		32.812	0	1				34314	3128	22694	22704	39197	39197					0.1400754785402114
LRRLKVEAGY	10	Unmodified	_LRRLKVEAGY_					0	0	0			REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	602.7515258789062	2	602.861672	1203.70879	0.58499	0.00035267	1.9909	0.0012002	2.5759	0.0015529	602.862548764706	85.981	0.57489	86.424	86.116	86.691	0.44331					30	13	3	0	0	0	0.37624	1	10037	10037		56.721	3.3696	1	436990	+		34315	19119	22695	22705	39198	39198					0.11508473933986352
LRRLKVEAGY	10	Unmodified	_LRRLKVEAGY_					0	0	0			REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	602.861672	1203.70879	-0.57353	-0.00034576	3.2681	0.0019702	2.6946	0.0016244	602.863260119389	86.043	0.65369	86.491	86.235	86.889	0.44736	0.033398	0.00099235	NaN	56.721	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	408180	+		34316	19119	22695	22705							0.11508473933986352
LRRLLLRYHLL	11	Unmodified	_LRRLLLRYHLL_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.6532287597656	3	489.320784	1464.94052	-1.9764	-0.00096708	-0.33718	-0.00016499	-2.3136	-0.0011321	489.65544335255646	17.157	0.41713	17.157	16.95	17.367	0					39	19	3	0	0	0	0.80813	1	188	188		9.6461	2.2464	1	52156	+		34317	16105	22696	22706	39199	39199					0.22664941355560586
LRRLLPLCRR	10	Unmodified	_LRRLLPLCRR_					0	0	0			REV__ENST00000590602.5_1_17:76113350-76113936:-|nuORF	REV__ENST00000590602.5_1_17:76113350-76113936:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3929443359375	2	648.413883	1294.81321	2.6465	0.0017161	-3.0664	-0.0019883	-0.41989	-0.00027226	648.4118469047072	107.43	0.12202	107.4	107.34	107.46	-0.034134					4	2	2	0	0	0	0.37624	1	11901	11901		15.642	10.084	1	258400	+		34318	29187	22697	22707	39200	39200					0.17759897209703013
LRRLSHSPPA	10	Unmodified	_LRRLSHSPPA_					0	0	0		ENST00000477980.6_1_X:100878297-100878528:+|nuORF	ENST00000477980.6_1_X:100878297-100878528:+|nuORF	ENST00000477980.6_1_X:100878297-100878528:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.327880859375	2	567.330539	1132.64652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.6	1	116.59	116.09	117.09	-0.014999								0	0	0	0.45132	1	13983	13983		32.812	11.865	1				34319	12371	22698	22708	39201	39201					0.0855074758567298
LRRMRTSDYL	10	Unmodified	_LRRMRTSDYL_					0	0	0			REV__ENSG00000281106|ENST00000629372|TMEM272	REV__ENSG00000281106|ENST00000629372|TMEM272	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.9051818847656	3	437.571439	1309.69249	-0.1105	-4.835E-05	-2.7885	-0.0012202	-2.899	-0.0012685	437.5698703487814	34.695	0.63161	34.691	34.376	35.008	-0.0047417					34	16	3	0	0	0	0.86621	1	2121	2121		26.063	5.2262	1	62620	+		34320	24047	22699	22709	39202	39202					0.05003024705592907
LRRNGLEPV	9	Unmodified	_LRRNGLEPV_					0	0	0		ENSG00000173156|ENST00000308831|RHOD	ENSG00000173156|ENST00000308831|RHOD	ENSG00000173156|ENST00000308831|RHOD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.310302734375	2	527.311815	1052.60908	0.44959	0.00023708	-1.5212	-0.00080216	-1.0716	-0.00056508	527.3109028538461	79.369	1.1902	79.786	79.02	80.21	0.41621					60	27	3	0	0	0	0.51307	1	9087	9087		51.335	0.14276	1	973190			34321	6833	22700	22710	39203	39203					0.08487656320039605
LRRNKLRFLPE	11	Unmodified	_LRRNKLRFLPE_					0	0	0		ENSG00000066557|ENST00000370952|LRRC40	ENSG00000066557|ENST00000370952|LRRC40	ENSG00000066557|ENST00000370952|LRRC40	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.24505615234375	3	481.296527	1440.86775	-0.60269	-0.00029007	-4.1661	-0.0020051	-4.7688	-0.0022952	481.29450736633095	58.496	0.50572	59.049	58.837	59.343	0.55323					18	11	2	0	0	0	0.17955	1	6139	6139		5.4129	0	1	176960			34322	1163	22701	22711	39204	39204					0.16495187562145475
LRRNKLRFLPE	11	Unmodified	_LRRNKLRFLPE_					0	0	0		ENSG00000066557|ENST00000370952|LRRC40	ENSG00000066557|ENST00000370952|LRRC40	ENSG00000066557|ENST00000370952|LRRC40	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	481.296527	1440.86775	-0.54533	-0.00026246	-4.4746	-0.0021536	-5.02	-0.0024161	481.6284004666906	58.767	0.54285	59.159	58.775	59.318	0.39209	0.054839	-0.00032743	NaN	5.4129	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	246810			34323	1163	22701	22711							0.16495187562145475
LRRNKVVMTA	10	Unmodified	_LRRNKVVMTA_					0	0	0			REV__CON__Q0VCM5	REV__CON__Q0VCM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	594.3527221679688	2	594.355699	1186.69685	-0.60252	-0.00035811	-2.5216	-0.0014987	-3.1241	-0.0018568	594.3549137001515	102.9	0.68748	102.91	102.55	103.23	0.0082016					33	16	3	0	0	0	0.8608	1	11044	11044		34.173	7.4796	1	241130	+	+	34324	15996	22702	22712	39205	39205					0.11096533919157991
LRRNNSYT	8	Unmodified	_LRRNNSYT_					0	0	0		ENSG00000144136|ENST00000272542|SLC20A1;ENST00000490674.1_1_2:113416785-113418150:+|nuORF;ENSG00000168575|ENST00000520262|SLC20A2	ENSG00000144136|ENST00000272542|SLC20A1;ENSG00000168575|ENST00000520262|SLC20A2	ENSG00000144136|ENST00000272542|SLC20A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.270263671875	2	512.270147	1022.52574	4.8773	0.0024985	-3.4663	-0.0017757	1.411	0.0007228	512.2679964843359	106.96	1.075	107.11	106.6	107.68	0.14929					66	41	3	0	0	0	0.89494	1	13055	13055		37.159	3.6435	1	226660			34325	4693;6414	22703	22713	39206	39206					0.015379198721802823
LRRNTAPV	8	Unmodified	_LRRNTAPV_					0	0	0		nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;ENSG00000111077|ENST00000314250|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;ENST00000549498.5_1_12:53442984-53449630:+|nuORF	nc|ENSG00000111077|Q63HR2-2|TNS2	nc|ENSG00000111077|Q63HR2-2|TNS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.77960205078125	2	463.780151	925.545748	-0.87225	-0.00040453	-0.71824	-0.00033311	-1.5905	-0.00073764	463.7798455403882	38.467	1.081	38.99	38.633	39.714	0.52235					66	25	3	0	0	0	0.93786	1	3165	3165		53.351	2.016	1	2514600			34326	2559	22704	22714	39207	39207					0.07999715602795732
LRRPPARSGL	10	Unmodified	_LRRPPARSGL_					0	0	0			REV__ENST00000503051.1_1_4:53525618-53527100:+|nuORF	REV__ENST00000503051.1_1_4:53525618-53527100:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.845458984375	2	561.846356	1121.67816	1.4106	0.00079252	-2.5998	-0.0014607	-1.1893	-0.00066819	561.8447337891968	96.819	2.411	96.866	96.355	98.766	0.047798					140	55	5	0	0	0	0.86272	1	10295	10295		24.519	1.4767	1	1810100	+		34327	27835	22705	22715	39208	39208					0.12218740339585565
LRRPRRPQAPP	11	Unmodified	_LRRPRRPQAPP_					0	0	0		ENST00000585839.5_1_19:14578398-14580330:+|nuORF	ENST00000585839.5_1_19:14578398-14580330:+|nuORF	ENST00000585839.5_1_19:14578398-14580330:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.6092529296875	3	448.609216	1342.80582	-0.14499	-6.5045E-05	0.50748	0.00022766	0.36249	0.00016261	448.60923938529277	75.242	1.1404	75.288	74.855	75.996	0.045952					95	34	4	0	0	0	0.73621	2	7226	7217;7226		25.126	4.0938	1	303390			34328	14154	22706	22716	39209;39210	39210					0.14812880933641281
LRRQMLRKSR	10	Unmodified	_LRRQMLRKSR_					0	0	0		nc|ENSG00000176049|Q96AA8-4|JAKMIP2;nc|ENSG00000176049|Q96AA8-2|JAKMIP2;nc|ENSG00000176049|Q96AA8|JAKMIP2;ENSG00000176049|ENST00000616793|JAKMIP2	nc|ENSG00000176049|Q96AA8-4|JAKMIP2	nc|ENSG00000176049|Q96AA8-4|JAKMIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.6094970703125	3	448.61034	1342.80919	-0.14499	-6.5045E-05	-1.9972	-0.00089595	-2.1422	-0.00096099	448.60923938529277	75.242	1.1404	75.288	74.855	75.996	0.045952					95	34	4	0	0	0	0.86931	1	7234	7234		14.086	0.57807	1	303390			34329	7052	22707	22717	39211	39211					0.15149807715988572
LRRRAPQAEL	10	Unmodified	_LRRRAPQAEL_					0	0	0			REV__ENST00000493197.5_1_5:177658804-177659618:-|nuORF	REV__ENST00000493197.5_1_5:177658804-177659618:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.91015625	3	403.910672	1208.71019	-0.34293	-0.00013851	-0.86883	-0.00035093	-1.2118	-0.00048945	403.9102188126006	68.233	2.7499	68.781	67.193	69.943	0.54819					138	70	3	0	0	0	0.86338	1	7612	7612		31.634	2.0835	1	253300	+		34330	27685	22708	22718	39212	39212					0.11418108022735396
LRRRHRGRTSF	11	Unmodified	_LRRRHRGRTSF_					0	0	0			REV__ENST00000322723.8_1_2:232329060-232329180:-|nuORF	REV__ENST00000322723.8_1_2:232329060-232329180:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.2815856933594	3	481.283503	1440.82868	-0.77355	-0.0003723	-0.076259	-3.6702E-05	-0.84981	-0.000409	481.28339459501956	101.39	1.951	101.6	100.24	102.19	0.2058					116	46	4	0	0	0	0.75779	1	10607	10607		20.315	4.3944	1	699120	+		34331	25025	22709	22719	39213	39213					0.12589900051102632
LRRRKPTHVL	10	Unmodified	_LRRRKPTHVL_					0	0	0			REV__chr1:154550469-154550662|13|10.31|0.5|4.38|-|1|UBE2Q1,None|2	REV__chr1:154550469-154550662|13|10.31|0.5|4.38|-|1|UBE2Q1,None|2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.294921875	3	425.942195	1274.80476	-0.39353	-0.00016762	0.41022	0.00017473	0.016695	7.1112E-06	426.2759630216051	75.024	0.46984	74.98	74.825	75.295	-0.043869					18	12	2	0	0	0	0.37624	1	7376	7376		31.634	13.801	1	84802	+		34332	15416	22710	22720	39214	39214					0.1783466656472683
LRRRKTGYSD	10	Unmodified	_LRRRKTGYSD_					0	0	0		ENST00000543238.5_1_16:943010-1020959:-|nuORF;ENST00000566609.1_1_16:1002623-1020980:-|nuORF;ENSG00000103227|ENST00000262301|LMF1	ENST00000543238.5_1_16:943010-1020959:-|nuORF	ENST00000543238.5_1_16:943010-1020959:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3794555664062	2	626.34946	1250.68437	0.92689	0.00058055	-4.0424	-0.0025319	-3.1155	-0.0019514	626.3480700373044	105.73	0.31809	105.77	105.51	105.83	0.038322					12	7	2	0	0	0	0.37624	1	11555	11555		32.812	18.675	1	206380			34333	2067	22711	22721	39215	39215					0.06905213780464692
LRRRKTGYSD	10	Unmodified	_LRRRKTGYSD_					0	0	0		ENST00000543238.5_1_16:943010-1020959:-|nuORF;ENST00000566609.1_1_16:1002623-1020980:-|nuORF;ENSG00000103227|ENST00000262301|LMF1	ENST00000543238.5_1_16:943010-1020959:-|nuORF	ENST00000543238.5_1_16:943010-1020959:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3792114257812	2	626.34946	1250.68437	-1.2036	-0.00075385	-3.9439	-0.0024703	-5.1475	-0.0032241	626.347309347279	105.15	0.20331	105.22	105.14	105.34	0.073112					9	4	3	0	0	0	0.37624	1	11126	11126		25.574	0	1	112270			34334	2067	22711	22721	39216	39216					0.06905213780464692
LRRRLGVLL	9	Unmodified	_LRRRLGVLL_					0	0	0			REV__ENST00000491910.5_1_22:24981856-24984399:-|nuORF	REV__ENST00000491910.5_1_22:24981856-24984399:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3755493164062	2	548.377292	1094.74003	-0.93575	-0.00051314	-4.429	-0.0024288	-5.3648	-0.0029419	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.7932	1	2614	2614		12.207	0.69583	1	651720	+		34335	22246	22712	22722	39217	39217					0.19645091758752642
LRRRLRDKSSQ	11	Unmodified	_LRRRLRDKSSQ_					0	0	0			REV__nc|ENSG00000134030|O43310-2|CTIF	REV__nc|ENSG00000134030|O43310-2|CTIF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2870788574219	3	472.283169	1413.82768	-1.7052	-0.00080535	1.1598	0.00054775	-0.54544	-0.0002576	472.2831250601672	101.79	0.95937	101.94	101.43	102.39	0.15505					50	23	3	0	0	0	0.17729	1	10691	10691		8.7993	3.1005	1	212580	+		34336	29855	22713	22723	39218	39218					0.13731640891546704
LRRRMSVWLQQ	11	Unmodified	_LRRRMSVWLQQ_					0	0	0		nc|ENSG00000176248|Q9UJX6-2|ANAPC2;ENSG00000176248|ENST00000323927|ANAPC2	nc|ENSG00000176248|Q9UJX6-2|ANAPC2	nc|ENSG00000176248|Q9UJX6-2|ANAPC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2471923828125	3	491.61375	1471.81942	0.50567	0.00024859	-1.9041	-0.00093608	-1.3984	-0.00068749	491.6119820057246	49.704	0.24638	50.549	50.436	50.683	0.84501					9	5	3	0	0	0	0.17729	1	4858	4858		23.378	9.2919	1	114700			34337	7068	22714	22724	39219	39219					0.10238370650586148
LRRRPKRRKSR	11	Unmodified	_LRRRPKRRKSR_					0	0	0			REV__ENST00000575617.1_1_16:3285285-3286042:-|nuORF	REV__ENST00000575617.1_1_16:3285285-3286042:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	503.8709411621094	3	503.665948	1507.97601	-1.302	-0.00065575	4.143	0.0020867	2.8411	0.0014309	503.66827241055523	61.705	0.20751	61.705	61.677	61.885	0					11	8	2	0	0	0	0.18258	1	5416	5416		12.957	3.3113	1	514790	+		34338	28986	22715	22725	39220	39220					0.24234416655895075
LRRRQLRPP	9	Unmodified	_LRRRQLRPP_					0	0	0		ENST00000480362.5_1_13:115047238-115047316:+|nuORF	ENST00000480362.5_1_13:115047238-115047316:+|nuORF	ENST00000480362.5_1_13:115047238-115047316:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.384033203125	2	596.380897	1190.74724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.646	1	24.704	24.204	25.204	0.058167								0	0	0	0.30778	1	864	864		27.882	4.8398	1				34339	12430	22716	22726	39221	39221					0.15949824359154263
LRRRQYYTMPN	11	Unmodified	_LRRRQYYTMPN_					0	0	0		ENSG00000128268|ENST00000341184|MGAT3	ENSG00000128268|ENST00000341184|MGAT3	ENSG00000128268|ENST00000341184|MGAT3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.73291015625	3	499.929627	1496.76705	-1.6168	-0.00080827	-2.1278	-0.0010638	-3.7446	-0.001872	499.92817711818964	30.563	0.70872	30.592	30.185	30.894	0.028618					31	15	3	0	0	0	0.18066	1	2023	2023		9.6461	0	1	110260			34340	3533	22717	22727	39222	39222					0.03853787516959528
LRRRRGIRAVL	11	Unmodified	_LRRRRGIRAVL_					0	0	0			REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6082763671875	3	455.972378	1364.8953	-0.3707	-0.00016903	-0.54498	-0.00024849	-0.91568	-0.00041752	456.3059216086542	69.004	0.58714	69.389	69.06	69.648	0.38416					14	13	2	0	0	0	0.17375	1	7591	7591		30.569	0	1	74817	+		34341	25728	22718	22728	39223	39223					0.2274513561301319
LRRRRLPQRQR	11	Unmodified	_LRRRRLPQRQR_					0	0	0		ENST00000331569.5_1_8:37554703-37555105:+|nuORF	ENST00000331569.5_1_8:37554703-37555105:+|nuORF	ENST00000331569.5_1_8:37554703-37555105:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.3273315429688	3	512.325702	1533.95528	-0.46223	-0.00023681	0.47439	0.00024304	0.012157	6.2284E-06	512.3256729612502	17	0.37227	17.046	16.869	17.241	0.0457					28	14	3	0	0	0	0.85439	1	203	203		5.6988	2.2901	1	146800			34342	10127	22719	22729	39224	39224					0.20965826276233201
LRRRRRARP	9	Unmodified	_LRRRRRARP_					0	0	0			REV__ENST00000504087.5_1_4:125633653-125633758:-|nuORF	REV__ENST00000504087.5_1_4:125633653-125633758:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	618.90234375	2	618.902863	1235.79117	-0.70301	-0.00043509	0.6578	0.00040711	-0.045206	-2.7978E-05	618.9030490497685	88.787	0.85529	89.258	89.075	89.93	0.47068					60	20	4	0	0	0	0.64922	1	10502	10502		44.117	16.235	1	1768000	+		34343	27851	22720	22730	39225	39225					0.18270853576154877
LRRRRRARP	9	Unmodified	_LRRRRRARP_					0	0	0			REV__ENST00000504087.5_1_4:125633653-125633758:-|nuORF	REV__ENST00000504087.5_1_4:125633653-125633758:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	618.902863	1235.79117	-0.70301	-0.00043509	0.6578	0.00040711	-0.045206	-2.7978E-05	618.9030490497685	88.787	0.85529	89.258	89.075	89.93	0.47068	0.019008	0.00096796	NaN	44.117	60	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1768000	+		34344	27851	22720	22730							0.18270853576154877
LRRSLAPSPG	10	Unmodified	_LRRSLAPSPG_					0	0	0		chr19:23339054-23342170|14|11.79|0.15|6.34|-|1|ZNF91,ZNF91|2	chr19:23339054-23342170|14|11.79|0.15|6.34|-|1|ZNF91,ZNF91|2	chr19:23339054-23342170|14|11.79|0.15|6.34|-|1|ZNF91,ZNF91|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3110961914062	2	527.311815	1052.60908	0.30458	0.00016061	-1.4031	-0.00073988	-1.0985	-0.00057927	527.3109007634706	82.716	1.747	83.19	82.836	84.583	0.47384					72	41	3	0	0	0	0.64457	1	9605	9605		47.657	1.6851	1	1438500			34345	270	22721	22731	39226	39226					0.08487656320039605
LRRSYWRHLRR	11	Unmodified	_LRRSYWRHLRR_					0	0	0		ENSG00000258429|ENST00000288022|PDF	ENSG00000258429|ENST00000288022|PDF	ENSG00000258429|ENST00000288022|PDF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	533.6439208984375	3	533.646553	1597.91783	0.45345	0.00024198	-3.3137	-0.0017683	-2.8602	-0.0015263	533.6450417955618	58.324	0.65345	58.434	58.183	58.837	0.11027					64	28	3	0	0	0	0.79476	1	4978	4978		12.433	3.221	1	164480			34346	8911	22722	22732	39227	39227					0.14278735010611854
LRRVKELTLS	10	Unmodified	_LRRVKELTLS_					0	0	0		ENSG00000162951|ENST00000295057|LRRTM1	ENSG00000162951|ENST00000295057|LRRTM1	ENSG00000162951|ENST00000295057|LRRTM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.3843994140625	2	607.882604	1213.75066	0.048596	2.9541E-05	-0.25906	-0.00015748	-0.21046	-0.00012794	608.3855940372756	99.006	1.8414	99.054	98.41	100.25	0.048157					65	42	2	0	0	0	0.86444	1	10682	10682		14.865	0	1	432200			34347	5754	22723	22733	39228	39228					0.15233029622504546
LRRVPGGG	8	Unmodified	_LRRVPGGG_					0	0	0		chr3:47802995-47805326|46|24.74|0.89|4.8|+|2|None,DHX30|1	chr3:47802995-47805326|46|24.74|0.89|4.8|+|2|None,DHX30|1	chr3:47802995-47805326|46|24.74|0.89|4.8|+|2|None,DHX30|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2479553222656	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.85	1	115.83	115.33	116.33	-0.02433								0	0	0	0.30125	1	12824	12824		20.482	0	1				34348	405	22724	22734	39229	39229					0.06959774885569914
LRRVPRGH	8	Unmodified	_LRRVPRGH_					0	0	0			REV__nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	REV__nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.6875915527344	2	495.807034	989.599515	0.66441	0.00032942	-2.6445	-0.0013111	-1.9801	-0.00098173	495.80579978828825	90.795	1.0199	91.246	90.863	91.883	0.45058					50	24	3	0	0	0	0.4196	1	10832	10832		52.299	26.849	1	392930	+		34349	30150	22725	22735	39230	39230					0.10429932825172727
LRRVPRGH	8	Unmodified	_LRRVPRGH_					0	0	0			REV__nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	REV__nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	495.807034	989.599515	-0.9107	-0.00045153	-0.89067	-0.0004416	-1.8014	-0.00089313	495.80670746346067	91.377	1.3845	91.377	90.903	92.287	0	0.19936	0.00090296	NaN	33.516	51	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	379570	+		34350	30150	22725	22735							0.10429932825172727
LRRVPRGH	8	Unmodified	_LRRVPRGH_					0	0	0			REV__nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	REV__nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	495.807034	989.599515	-0.072972	-3.618E-05	-1.3298	-0.00065931	-1.4027	-0.00069549	495.80633218090117	91.181	1.8649	91.25	90.804	92.669	0.069328	0.072033	0.00046755	NaN	33.516	89	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	621650	+		34351	30150	22725	22735							0.10429932825172727
LRRVPRGH	8	Unmodified	_LRRVPRGH_					0	0	0			REV__nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	REV__nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	495.807034	989.599515	-0.57039	-0.0002828	-1.0329	-0.00051211	-1.6033	-0.00079491	495.8065300685273	90.913	2.2012	90.959	90.595	92.796	0.046448	-0.21878	0.00076194	NaN	33.516	94	52	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	659920	+		34352	30150	22725	22735							0.10429932825172727
LRRVPRGH	8	Unmodified	_LRRVPRGH_					0	0	0			REV__nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	REV__nc|ENSG00000198488|Q6ZMB0-2|B3GNT6	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	495.807034	989.599515	0.71101	0.00035252	-2.3952	-0.0011876	-1.6842	-0.00083504	495.8059227129782	90.964	1.6419	91.118	90.679	92.321	0.15388	-0.059746	-0.00058895	NaN	33.516	63	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	608980	+		34353	30150	22725	22735							0.10429932825172727
LRRWRHLLRRL	11	Unmodified	_LRRWRHLLRRL_					0	0	0		ENST00000342232.4_1_8:75233190-75233559:-|nuORF	ENST00000342232.4_1_8:75233190-75233559:-|nuORF	ENST00000342232.4_1_8:75233190-75233559:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.32470703125	3	525.67081	1573.9906	-0.5246	-0.00027577	3.8846	0.002042	3.36	0.0017662	525.6724980459684	59.507	0.65872	59.508	59.201	59.86	0.00051117					22	18	2	0	0	0	0.1838	1	5138	5138		3.2113	2.8399	1	80533			34354	10256	22726	22736	39231	39231					0.22656488804045694
LRRYCLAVL	9	Unmodified	_LRRYCLAVL_					0	0	0		ENST00000409556.5_1_2:86684189-86693535:+|nuORF;ENST00000488971.1_1_2:86683605-86693535:+|nuORF	ENST00000409556.5_1_2:86684189-86693535:+|nuORF	ENST00000409556.5_1_2:86684189-86693535:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8296508789062	2	553.828786	1105.64302	-0.64285	-0.00035603	2.932	0.0016238	2.2891	0.0012678	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.77546	1	8565	8565		31.955	4.0726	1	1181400			34355	11311	22727	22737	39232	39232					0.09442361487435846
LRRYCLAVL	9	Unmodified	_LRRYCLAVL_					0	0	0		ENST00000409556.5_1_2:86684189-86693535:+|nuORF;ENST00000488971.1_1_2:86683605-86693535:+|nuORF	ENST00000409556.5_1_2:86684189-86693535:+|nuORF	ENST00000409556.5_1_2:86684189-86693535:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.830322265625	2	553.828786	1105.64302	-0.60953	-0.00033757	3.1509	0.0017451	2.5414	0.0014075	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.7932	1	8875	8875		25.45	2.4077	1	3935500			34356	11311	22727	22737	39233	39233					0.09442361487435846
LRRYCLAVL	9	Unmodified	_LRRYCLAVL_					0	0	0		ENST00000409556.5_1_2:86684189-86693535:+|nuORF;ENST00000488971.1_1_2:86683605-86693535:+|nuORF	ENST00000409556.5_1_2:86684189-86693535:+|nuORF	ENST00000409556.5_1_2:86684189-86693535:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8300170898438	2	553.828786	1105.64302	2.0416	0.0011307	0.42617	0.00023602	2.4678	0.0013667	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.69914	1	9385	9385		40.573	6.4001	1	5457600			34357	11311	22727	22737	39234	39234					0.09442361487435846
LRSDLASLLVI	11	Unmodified	_LRSDLASLLVI_					0	0	0			REV__nc|ENSG00000168126|Q8NHA6|OR2W6P	REV__nc|ENSG00000168126|Q8NHA6|OR2W6P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.5838623046875	3	400.583451	1198.72852	0.57912	0.00023199	0.86778	0.00034762	1.4469	0.0005796	400.5838627795449	24.287	0.98159	24.343	23.961	24.942	0.055487					52	24	3	0	0	0	0.70584	1	890	890		30.569	7.0462	1	65016	+		34358	30012	22728	22738	39235	39235					0.1371080515407357
LRSEDEADY	9	Unmodified	_LRSEDEADY_					0	0	0		nc|ENSG00000211648|P01700|IGLV1-47	nc|ENSG00000211648|P01700|IGLV1-47	nc|ENSG00000211648|P01700|IGLV1-47	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.2459106445312	2	549.240918	1096.46728	0.40902	0.00022465	0.1581	8.6836E-05	0.56712	0.00031149	549.2408821601733	56.714	0.92148	56.685	56.397	57.318	-0.02866					52	33	2	0	0	0	0.58151	1	5240	5240		47.916	3.7988	1	614600			34359	15229	22729	22739	39236	39236					-0.07709226283623138
LRSFLLPWQ	9	Unmodified	_LRSFLLPWQ_					0	0	0			REV__nc|ENSG00000169994|Q6PIF6-2|MYO7B	REV__nc|ENSG00000169994|Q6PIF6-2|MYO7B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.33203125	2	580.334759	1158.65496	0.33138	0.00019231	-4.0989	-0.0023788	-3.7676	-0.0021864	580.3322507801092	39.778	0.78229	39.866	39.53	40.312	0.088375					57	19	4	0	0	0	0.33718	1	2448	2448		62.107	7.3311	1	1035100	+		34360	21624	22730	22740	39237	39237					0.08198301502284266
LRSFRLLRVFK	11	Unmodified	_LRSFRLLRVFK_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;ENST00000480032.4_1_2:166152333-166226884:+|nuORF;chr2:165139608-165140702|31|22.42|0.29|6.25|-|ENST00000658209|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000183873|Q14524-5|SCN5A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000136531|Q99250-2|SCN2A;ENSG00000136531|ENST00000375437|SCN2A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000183873|Q14524-3|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3079528808594	3	478.973384	1433.89832	-1.6788	-0.00080411	3.2689	0.0015657	1.5901	0.0007616	479.3090926937771	44.658	1.9564	44.658	43.823	45.779	0					118	47	4	0	0	0	0.79716	1	3213	3213		11.932	4.591	1	394570			34361	313;4699;8110;311;725;7570;7701	22731	22741	39238	39238					0.19872965947115517
LRSFRLLRVFK	11	Unmodified	_LRSFRLLRVFK_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;ENST00000480032.4_1_2:166152333-166226884:+|nuORF;chr2:165139608-165140702|31|22.42|0.29|6.25|-|ENST00000658209|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000183873|Q14524-5|SCN5A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000136531|Q99250-2|SCN2A;ENSG00000136531|ENST00000375437|SCN2A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000183873|Q14524-3|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3079528808594	3	478.973384	1433.89832	-1.0377	-0.00049701	2.1803	0.0010443	1.1426	0.00054727	478.97440370036395	43.258	1.9554	43.222	42.189	44.144	-0.035816					117	46	4	0	0	0	0.81407	1	3462	3462		8.4073	2.0864	1	472330			34362	313;4699;8110;311;725;7570;7701	22731	22741	39239	39239					0.19872965947115517
LRSFRLLRVFK	11	Unmodified	_LRSFRLLRVFK_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;ENST00000480032.4_1_2:166152333-166226884:+|nuORF;chr2:165139608-165140702|31|22.42|0.29|6.25|-|ENST00000658209|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000183873|Q14524-5|SCN5A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000136531|Q99250-2|SCN2A;ENSG00000136531|ENST00000375437|SCN2A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000183873|Q14524-3|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3099670410156	3	478.973384	1433.89832	-0.72158	-0.00034562	3.2574	0.0015602	2.5358	0.0012146	478.97494935068806	47.94	1.1198	47.915	47.673	48.793	-0.025326					45	28	2	0	0	0	0.81892	1	4047	4047		8.0344	1.7135	1	261310			34363	313;4699;8110;311;725;7570;7701	22731	22741	39240	39240					0.19872965947115517
LRSFRLLRVFK	11	Unmodified	_LRSFRLLRVFK_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;ENST00000480032.4_1_2:166152333-166226884:+|nuORF;chr2:165139608-165140702|31|22.42|0.29|6.25|-|ENST00000658209|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000183873|Q14524-5|SCN5A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000136531|Q99250-2|SCN2A;ENSG00000136531|ENST00000375437|SCN2A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000183873|Q14524-3|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.30804443359375	3	478.973384	1433.89832	-1.9678	-0.00094254	3.1251	0.0014969	1.1573	0.00055432	479.30912300096907	43.377	1.5252	43.377	42.724	44.249	0.00016785					100	36	3	0	0	0	0.79224	1	3418	3418		12.957	3.3113	1	374940			34364	313;4699;8110;311;725;7570;7701	22731	22741	39241	39241					0.19872965947115517
LRSFRLLRVFK	11	Unmodified	_LRSFRLLRVFK_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;ENST00000480032.4_1_2:166152333-166226884:+|nuORF;chr2:165139608-165140702|31|22.42|0.29|6.25|-|ENST00000658209|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000183873|Q14524-5|SCN5A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000136531|Q99250-2|SCN2A;ENSG00000136531|ENST00000375437|SCN2A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000183873|Q14524-3|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9742126464844	3	478.973384	1433.89832	-1.3068	-0.00062591	3.7757	0.0018085	2.469	0.0011826	478.9750986281663	49.151	3.7005	49.151	47.803	51.503	0.00016785					187	96	3	0	0	0	0.7896	1	4016	4016		13.508	3.404	1	240410			34365	313;4699;8110;311;725;7570;7701	22731	22741	39242	39242					0.19872965947115517
LRSFRLLRVFK	11	Unmodified	_LRSFRLLRVFK_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;ENST00000480032.4_1_2:166152333-166226884:+|nuORF;chr2:165139608-165140702|31|22.42|0.29|6.25|-|ENST00000658209|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000183873|Q14524-5|SCN5A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000136531|Q99250-2|SCN2A;ENSG00000136531|ENST00000375437|SCN2A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000183873|Q14524-3|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3086242675781	3	478.973384	1433.89832	0.27661	0.00013249	1.6592	0.00079469	1.9358	0.00092719	479.30840116268075	44.7	1.3272	44.749	44.002	45.329	0.048996					98	31	5	0	0	0	0.77511	1	3223	3223		16.53	6.8837	1	651720			34366	313;4699;8110;311;725;7570;7701	22731	22741	39243	39243					0.19872965947115517
LRSFRLLRVFK	11	Unmodified	_LRSFRLLRVFK_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;ENST00000480032.4_1_2:166152333-166226884:+|nuORF;chr2:165139608-165140702|31|22.42|0.29|6.25|-|ENST00000658209|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000183873|Q14524-5|SCN5A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000136531|Q99250-2|SCN2A;ENSG00000136531|ENST00000375437|SCN2A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000183873|Q14524-3|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30670166015625	3	478.973384	1433.89832	-0.085377	-4.0893E-05	1.9381	0.0009283	1.8527	0.0008874	479.30837143687245	43.044	1.6592	42.994	42.147	43.806	-0.050308					106	44	4	0	0	0	0.78083	1	2893	2893		15.337	5.2336	1	375540			34367	313;4699;8110;311;725;7570;7701	22731	22741	39244	39244					0.19872965947115517
LRSGRLTP	8	Unmodified	_LRSGRLTP_					0	0	0			REV__ENST00000473243.5_1_19:19764878-19766320:-|nuORF	REV__ENST00000473243.5_1_19:19764878-19766320:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2745056152344	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.91472	1	11193	11193		44.117	8.4985	1	19085000	+		34368	27279	22732	22742	39245	39245					0.08152313228504227
LRSIIDLVF	9	Unmodified	_LRSIIDLVF_					0	0	0			REV__nc|ENSG00000004766|Q96JG6-3|VPS50	REV__nc|ENSG00000004766|Q96JG6-3|VPS50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3259887695312	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12519	12519		25.574	0.12388	1	4041000	+		34369	16061	22733	22743	39246	39246					0.10939479408125408
LRSKDKITT	9	Unmodified	_LRSKDKITT_					0	0	0			REV__ENSG00000183324|ENST00000331090|REC114	REV__ENSG00000183324|ENST00000331090|REC114	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.3190307617188	2	531.319306	1060.62406	-0.6637	-0.00035264	0.93655	0.00049761	0.27285	0.00014497	531.319555565115	95.322	2.6544	95.322	94.812	97.466	0					162	61	5	0	0	0	0.78983	1	9483	9483		27.882	1.1893	1	1864100	+		34370	22597	22734	22744	39247	39247					0.09617103397340543
LRSKDKITT	9	Unmodified	_LRSKDKITT_					0	0	0			REV__ENSG00000183324|ENST00000331090|REC114	REV__ENSG00000183324|ENST00000331090|REC114	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3184814453125	2	531.319306	1060.62406	2.5637	0.0013622	-2.509	-0.0013331	0.05478	2.9106E-05	531.3177191515188	95.1	2.5434	95.042	94.557	97.1	-0.057526					188	59	5	0	0	0	0.78983	1	10112	10112		27.882	4.3595	1	4072600	+		34371	22597	22734	22744	39248	39248					0.09617103397340543
LRSKDSKA	8	Unmodified	_LRSKDSKA_					0	0	0		chr1:39561122-39562073|32|19.69|0.87|4.5|-|0|PABPC4,PABPC4|1	chr1:39561122-39562073|32|19.69|0.87|4.5|-|0|PABPC4,PABPC4|1	chr1:39561122-39562073|32|19.69|0.87|4.5|-|0|PABPC4,PABPC4|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.7630310058594	2	452.764166	903.513779	0.15107	6.8398E-05	-2.3595	-0.0010683	-2.2085	-0.00099991	452.7631190249679	39.832	0.73378	39.802	39.439	40.173	-0.03027					38	17	3	0	0	0	0.884	1	2804	2804		33.516	8.0654	1	134080			34372	50	22735	22745	39249	39249					0.05816303128983691
LRSLLEEF	8	Unmodified	_LRSLLEEF_					0	0	0		ENST00000257181.9_1_1:52883535-52883676:+|nuORF	ENST00000257181.9_1_1:52883535-52883676:+|nuORF	ENST00000257181.9_1_1:52883535-52883676:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34521484375	2	503.782025	1005.5495	-0.88873	-0.00044773	-4.0956	-0.0020633	-4.9843	-0.002511	504.279960116111	56.715	0.76749	57.112	56.809	57.576	0.39672					21	17	2	0	0	0	0.4196	1	5852	5852		57.811	0	1	101010			34373	9348	22736	22746	39250	39250					0.046943405859906306
LRSLPGRG	8	Unmodified	_LRSLPGRG_					0	0	0			REV__ENST00000562799.1_1_16:23568454-23568652:-|nuORF	REV__ENST00000562799.1_1_16:23568454-23568652:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.2713623046875	2	428.261594	854.508634	0.60592	0.00025949	-2.199	-0.00094176	-1.5931	-0.00068227	428.2606525797111	36.386	1.5254	36.668	36.229	37.755	0.28173					51	36	2	0	0	0	0.4196	1	2978	2978		18.324	0.95945	1	146010	+		34374	28807	22737	22747	39251	39251					0.0755604405703707
LRSLPGRG	8	Unmodified	_LRSLPGRG_					0	0	0			REV__ENST00000562799.1_1_16:23568454-23568652:-|nuORF	REV__ENST00000562799.1_1_16:23568454-23568652:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	428.261594	854.508634	-1.9346	-0.00082852	-1.2453	-0.00053333	-3.18	-0.0013619	428.2607360746876	36.359	0.42002	36.359	36.181	36.602	0	-0.15429	0.0018006	NaN	18.324	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44160	+		34375	28807	22737	22747							0.0755604405703707
LRSLPGRG	8	Unmodified	_LRSLPGRG_					0	0	0			REV__ENST00000562799.1_1_16:23568454-23568652:-|nuORF	REV__ENST00000562799.1_1_16:23568454-23568652:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	428.261594	854.508634	-1.7659	-0.00075628	-0.44344	-0.00018991	-2.2094	-0.00094618	428.2615222939515	36.367	0.22412	36.391	36.185	36.409	0.023624	-0.12269	0.0024874	NaN	18.324	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22071	+		34376	28807	22737	22747							0.0755604405703707
LRSLPGRG	8	Unmodified	_LRSLPGRG_					0	0	0			REV__ENST00000562799.1_1_16:23568454-23568652:-|nuORF	REV__ENST00000562799.1_1_16:23568454-23568652:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	428.261594	854.508634	1.743	0.00074648	-4.2752	-0.0018309	-2.5322	-0.0010844	428.25966195197464	36.196	0.49869	36.636	36.372	36.871	0.44043	0.12257	-0.00079462	NaN	18.324	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224450	+		34377	28807	22737	22747							0.0755604405703707
LRSNTGNRKY	10	Unmodified	_LRSNTGNRKY_					0	0	0		CON__Q28107	CON__Q28107	CON__Q28107	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5753173828125	3	403.554666	1207.64217	-0.15647	-6.3145E-05	-1.3182	-0.00053198	-1.4747	-0.00059513	403.55442244825485	80.861	0.28486	81.387	81.161	81.446	0.52676					10	6	2	0	0	0	0.37624	1	9334	9334		37.508	0	1	129870		+	34378	608	22738	22748	39252	39252					0.046652383720811486
LRSRQRRQPRP	11	Unmodified	_LRSRQRRQPRP_					0	0	0		nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1;ENSG00000143337|ENST00000606911|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1	nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1	nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7178039550781	3	483.958908	1448.85489	0.46059	0.00022291	1.7995	0.00087089	2.2601	0.0010938	483.959499201032	96.607	0.6721	97.011	96.499	97.171	0.40451					28	15	3	0	0	0	0.17504	1	11589	11589		31.068	14.538	1	125720			34379	4620	22739	22749	39253	39253					0.14842169222583834
LRSRQRRQPRP	11	Unmodified	_LRSRQRRQPRP_					0	0	0		nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1;ENSG00000143337|ENST00000606911|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1	nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1	nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	483.958908	1448.85489	-0.74412	-0.00036012	2.5499	0.001234	1.8058	0.00087392	483.9599990426351	96.714	0.55473	96.945	96.695	97.25	0.23103	-0.033019	0.00069899	NaN	31.068	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72725			34380	4620	22739	22749							0.14842169222583834
LRSRSLPTRL	10	Unmodified	_LRSRSLPTRL_					0	0	0		ENST00000568263.5_1_16:2570411-2570997:+|nuORF;ENST00000565963.5_1_16:2570411-2570947:+|nuORF;ENST00000569219.1_1_16:2570411-2577717:+|nuORF	ENST00000568263.5_1_16:2570411-2570997:+|nuORF	ENST00000568263.5_1_16:2570411-2570997:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.5842590332031	3	400.250806	1197.73059	-0.37081	-0.00014842	-3.8291	-0.0015326	-4.1999	-0.001681	400.24881333281155	24.759	1.4507	24.713	23.876	25.327	-0.04598					79	33	4	0	0	0	0.86647	1	988	988		28.577	1.5294	1	107720			34381	13927	22740	22750	39254	39254					0.13963278682558666
LRSSRHSGLSH	11	Unmodified	_LRSSRHSGLSH_					0	0	0		ENSG00000160951|ENST00000292513|PTGER1	ENSG00000160951|ENST00000292513|PTGER1	ENSG00000160951|ENST00000292513|PTGER1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.26617431640625	3	412.890048	1235.64832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.403	1	16.322	15.822	16.822	-0.080017								0	0	0	0.56276	1	112	112		27.644	3.4121	1				34382	5617	22741	22751	39255	39255					0.03991756603613794
LRSTKALGPTR	11	Unmodified	_LRSTKALGPTR_					0	0	0		ENST00000470322.5_1_10:104242584-104242881:-|nuORF	ENST00000470322.5_1_10:104242584-104242881:-|nuORF	ENST00000470322.5_1_10:104242584-104242881:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.91314697265625	3	400.578811	1198.7146	3.1807	0.0012741	1.1216	0.00044928	4.3022	0.0017234	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.75457	1	12625	12625		21.032	0.71722	1	88404			34383	12217	22742	22752	39256	39256					0.12319572445630911
LRSVLNKES	9	Unmodified	_LRSVLNKES_					0	0	0		nc|ENSG00000120733|Q7LBC6-2|KDM3B;ENSG00000120733|ENST00000314358|KDM3B;nc|ENSG00000120733|Q7LBC6-3|KDM3B	nc|ENSG00000120733|Q7LBC6-2|KDM3B	nc|ENSG00000120733|Q7LBC6-2|KDM3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3029174804688	2	523.303655	1044.59276	-0.1515	-7.9283E-05	-0.038132	-1.9954E-05	-0.18964	-9.9237E-05	523.3034922697021	101.03	1.8684	101.23	100.28	102.15	0.2058					77	44	4	0	0	0	0.76255	1	10600	10600		35.618	5.1146	1	790350			34384	3150	22743	22753	39257	39257					0.07224530363282611
LRSVSDPGH	9	Unmodified	_LRSVSDPGH_					0	0	0		ENST00000602321.5_1_16:67682040-67682571:+|nuORF	ENST00000602321.5_1_16:67682040-67682571:+|nuORF	ENST00000602321.5_1_16:67682040-67682571:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.23614501953125	2	484.251423	966.488293	0.21064	0.000102	-1.7617	-0.00085312	-1.5511	-0.00075111	484.25071643177534	86.108	0.86259	86.551	85.989	86.852	0.44331					32	20	3	0	0	0	0.20752	1	10069	10069		53.351	0	1	348040			34385	14402	22744	22754	39258	39258					0.003708286065716493
LRSVSDPGH	9	Unmodified	_LRSVSDPGH_					0	0	0		ENST00000602321.5_1_16:67682040-67682571:+|nuORF	ENST00000602321.5_1_16:67682040-67682571:+|nuORF	ENST00000602321.5_1_16:67682040-67682571:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2391662597656	2	484.251423	966.488293	-0.54762	-0.00026518	-1.127	-0.00054576	-1.6746	-0.00081094	484.250623158681	84.869	0.51411	85.317	85.033	85.547	0.44736					21	12	2	0	0	0	0.20789	1	9883	9883		51.335	0	1	389850			34386	14402	22744	22754	39259	39259					0.003708286065716493
LRSWDTCS	8	Unmodified	_LRSWDTCS_					0	0	0		ENST00000373109.6_1_10:73820069-73820282:-|nuORF	ENST00000373109.6_1_10:73820069-73820282:-|nuORF	ENST00000373109.6_1_10:73820069-73820282:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2391662597656	2	484.218734	966.422915	-0.53847	-0.00026074	1.7509	0.0008478	1.2124	0.00058706	484.21961677361224	84.848	0.47794	85.296	84.993	85.471	0.44736					21	11	2	0	0	0	0.4196	1	9883	9883		53.351	2.016	1	408870			34387	10730	22745	22755	39260	39260					-0.06163908910787086
LRSWLQLP	8	Unmodified	_LRSWLQLP_					0	0	0		ENST00000563328.4_1_16:72822270-72822732:+|nuORF	ENST00000563328.4_1_16:72822270-72822732:+|nuORF	ENST00000563328.4_1_16:72822270-72822732:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8015441894531	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.071	1	53.088	52.588	53.588	0.017487								0	0	0	0.29631	1	4656	4656		25.45	1.2474	1				34388	13867	22746	22756	39261	39261					0.08122056922411502
LRSWSVIP	8	Unmodified	_LRSWSVIP_					0	0	0			REV__ENSG00000174498|ENST00000327987|IGDCC3	REV__ENSG00000174498|ENST00000327987|IGDCC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2776184082031	2	479.279452	956.544351	-0.95082	-0.00045571	-3.0433	-0.0014586	-3.9941	-0.0019143	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.89962	1	9700	9700		38.806	3.1879	1	6350300	+		34389	21998	22747	22757	39262	39262					0.0643408151404401
LRTAKQLSD	9	Unmodified	_LRTAKQLSD_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3138427734375	2	516.29583	1030.57711	2.8262	0.0014592	0.15886	8.2019E-05	2.9851	0.0015412	516.7974581354848	99.856	0.43777	99.803	99.65	100.09	-0.053741					13	9	2	0	0	0	0.20789	1	10827	10827		30.318	6.795	1	146580	+		34390	18606	22748	22758	39263	39263					0.06304243846238933
LRTALIFGGFI	11	Unmodified	_LRTALIFGGFI_					0	0	0		ENSG00000250317|ENST00000506197|SMIM20;nc|ENSG00000250317|Q8N5G0-2|SMIM20	ENSG00000250317|ENST00000506197|SMIM20	ENSG00000250317|ENST00000506197|SMIM20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3667602539062	2	604.363516	1206.71248	3.2041	0.0019365	1.2264	0.00074118	4.4305	0.0026776	604.3643423116607	107.9	0.57175	107.87	107.34	107.92	-0.031487					38	13	5	0	0	0	0.73621	1	11933	11933		15.642	0	1	10754000			34391	8845	22749	22759	39264	39264					0.11739143707859512
LRTCGKVIPF	10	Unmodified	_LRTCGKVIPF_					0	0	0		ENST00000535420.5_1_1:154989902-154990361:+|nuORF	ENST00000535420.5_1_1:154989902-154990361:+|nuORF	ENST00000535420.5_1_1:154989902-154990361:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.329345703125	2	567.328619	1132.64269	0.79571	0.00045143	1.1706	0.0006641	1.9663	0.0011155	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.8651	1	9821	9821		25.574	0	1	18145000			34392	13422	22750	22760	39265	39265					0.08166941767581193
LRTCGKVIPF	10	Unmodified	_LRTCGKVIPF_					0	0	0		ENST00000535420.5_1_1:154989902-154990361:+|nuORF	ENST00000535420.5_1_1:154989902-154990361:+|nuORF	ENST00000535420.5_1_1:154989902-154990361:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.32763671875	2	567.328619	1132.64269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.63	1	103.9	103.4	104.4	0.26524								0	0	0	0.45132	1	12649	12649		31.53	4.7337	1				34393	13422	22750	22760	39266	39266					0.08166941767581193
LRTGFRIL	8	Unmodified	_LRTGFRIL_					0	0	0		ENSG00000118246|ENST00000402774|FASTKD2;nc|ENSG00000118246|Q9NYY8-2|FASTKD2;ENST00000487777.5_1_2:207631381-207653673:+|nuORF	ENSG00000118246|ENST00000402774|FASTKD2	ENSG00000118246|ENST00000402774|FASTKD2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	488.3082275390625	2	488.308544	974.602535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.991	1	25.991	25.491	26.491	0								0	0	0	0.30125	1	973	973		20.482	1.1219	1				34394	3020	22751	22761	39267	39267					0.11421763159330567
LRTGHSVGT	9	Unmodified	_LRTGHSVGT_					0	0	0			REV__ENST00000544575.1_1_11:73586997-73587536:-|nuORF	REV__ENST00000544575.1_1_11:73586997-73587536:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2529296875	2	464.253966	926.493378	-1.2188	-0.00056582	1.1641	0.00054045	-0.054649	-2.5371E-05	464.25441329803914	81.663	2.6471	81.663	80.243	82.89	0					182	81	3	0	0	0	0.76764	1	7526	7526		34.173	0.67956	1	304200	+		34395	28515	22752	22762	39268	39268					0.027191324691784757
LRTGHSVGT	9	Unmodified	_LRTGHSVGT_					0	0	0			REV__ENST00000544575.1_1_11:73586997-73587536:-|nuORF	REV__ENST00000544575.1_1_11:73586997-73587536:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25335693359375	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.71772	2	8154	8136;8154		39.253	2.8061	1	946850	+		34396	28515	22752	22762	39269;39270	39270					0.027191324691784757
LRTGHSVGT	9	Unmodified	_LRTGHSVGT_					0	0	0			REV__ENST00000544575.1_1_11:73586997-73587536:-|nuORF	REV__ENST00000544575.1_1_11:73586997-73587536:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2537536621094	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.69624	2	8599	8370;8599		40.778	5.1599	1	1673200	+		34397	28515	22752	22762	39271;39272	39272					0.027191324691784757
LRTGHSVGT	9	Unmodified	_LRTGHSVGT_					0	0	0			REV__ENST00000544575.1_1_11:73586997-73587536:-|nuORF	REV__ENST00000544575.1_1_11:73586997-73587536:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2541809082031	2	464.253966	926.493378	-0.76573	-0.00035549	0.99904	0.00046381	0.2333	0.00010831	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.77244	1	9759	9759		32.812	0.85756	1	1046600	+		34398	28515	22752	22762	39273	39273					0.027191324691784757
LRTGPMFGPK	10	Unmodified	_LRTGPMFGPK_					0	0	0		nc|ENSG00000070610|Q9HCG7-3|GBA2;ENSG00000070610|ENST00000378103|GBA2	nc|ENSG00000070610|Q9HCG7-3|GBA2	nc|ENSG00000070610|Q9HCG7-3|GBA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.306396484375	2	552.305144	1102.59573	-0.5921	-0.00032702	3.0593	0.0016897	2.4672	0.0013627	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.70553	1	9067	9067		44.377	2.9506	1	1102700			34399	1247	22753	22763	39274	39274					0.04854082216434108
LRTHSLSN	8	Unmodified	_LRTHSLSN_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;ENSG00000166833|ENST00000349880|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1-5|NAV2;nc|ENSG00000166833|Q8IVL1-6|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2537536621094	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.89291	1	8406	8406		36.447	2.9312	1	1673200			34400	15072	22754	22764	39275	39275					0.027191324691898444
LRTHTGEIP	9	Unmodified	_LRTHTGEIP_					0	0	0		ENSG00000187187|ENST00000347077|ZNF546	ENSG00000187187|ENST00000347077|ZNF546	ENSG00000187187|ENST00000347077|ZNF546	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.28125	2	512.282723	1022.55089	0.38138	0.00019537	-3.0677	-0.0015715	-2.6864	-0.0013762	512.2810762358159	86.258	3.4931	86.314	85.063	88.556	0.055649					143	81	2	0	0	0	0.67345	1	8846	8846		42.396	1.618	1	344420			34401	7847	22755	22765	39276	39276					0.0405197467475773
LRTKFKKGLK	10	Unmodified	_LRTKFKKGLK_					0	0	0		ENST00000378037.9_1_13:53035056-53035092:+|nuORF	ENST00000378037.9_1_13:53035056-53035092:+|nuORF	ENST00000378037.9_1_13:53035056-53035092:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	609.8540649414062	2	609.905882	1217.79721	0.48865	0.00029803	-3.5216	-0.0021478	-3.033	-0.0018498	610.405613084256	53.956	0.41268	54.037	53.915	54.328	0.081524					10	9	2	0	0	0	0.37624	1	4427	4427		14.137	1.3254	1	58379			34402	10854	22756	22766	39277	39277					0.19702514244454505
LRTKLFFIQK	10	Unmodified	_LRTKLFFIQK_					0	0	0			REV__ENST00000407916.2_1_7:55003624-55004065:+|nuORF	REV__ENST00000407916.2_1_7:55003624-55004065:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	431.94085693359375	3	431.939569	1292.79688	0.55064	0.00023785	2.9355	0.0012679	3.4861	0.0015058	431.940835038813	16.615	0.67008	16.59	16.376	17.046	-0.024035					60	28	6	0	0	0	0.86409	1	164	164		25.126	0.89417	1	1017400	+		34403	26321	22757	22767	39278	39278					0.1621909452460386
LRTLKRSLQP	10	Unmodified	_LRTLKRSLQP_					0	0	0		ENSG00000110002|ENST00000456829|VWA5A	ENSG00000110002|ENST00000456829|VWA5A	ENSG00000110002|ENST00000456829|VWA5A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.58917236328125	3	404.59094	1210.75099	-1.8941	-0.00076635	-2.1479	-0.00086903	-4.0421	-0.0016354	404.58993654728107	39.182	1.7584	39.182	38.483	40.241	0					111	42	4	0	0	0	0.86207	1	2464	2464		24.232	0.70912	1	190430			34404	2498	22758	22768	39279	39279					0.15404449342349835
LRTLLFLR	8	Unmodified	_LRTLLFLR_					0	0	0			REV__ENST00000282441.9_1_11:102102101-102102167:+|nuORF	REV__ENST00000282441.9_1_11:102102101-102102167:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3138427734375	2	516.339844	1030.66514	-1.5618	-0.00080641	0.33256	0.00017171	-1.2292	-0.0006347	516.3402768411048	99.033	0.50038	99.219	98.898	99.399	0.18582					18	11	3	0	0	0	0.4196	1	10201	10201		17.365	9.1337	1	700910	+		34405	24614	22759	22769	39280	39280					0.1510290922749391
LRTLLLKHSH	10	Unmodified	_LRTLLLKHSH_					0	0	0		nc|ENSG00000114923|P48751-3|SLC4A3;ENSG00000114923|ENST00000358055|SLC4A3;nc|ENSG00000114923|P48751-2|SLC4A3	nc|ENSG00000114923|P48751-3|SLC4A3	nc|ENSG00000114923|P48751-3|SLC4A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.58758544921875	3	406.587418	1216.74043	-0.37107	-0.00015087	0.97422	0.00039611	0.60315	0.00024523	406.58772324462274	24.588	2.4069	24.542	24.117	26.524	-0.04598					132	57	4	0	0	0	0.86409	1	965	965		25.126	3.4402	1	381610			34406	14857	22760	22770	39281	39281					0.1407246668791231
LRTLLLTHSLS	11	Unmodified	_LRTLLLTHSLS_					0	0	0			REV__ENSG00000197233|ENST00000335302|OR1J2	REV__ENSG00000197233|ENST00000335302|OR1J2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.8838500976562	2	627.382437	1252.75032	0.97876	0.00061406	-1.3082	-0.00082073	-0.32942	-0.00020667	627.381549342371	112.23	0.23456	112.26	112.22	112.46	0.028854					11	8	2	0	0	0	0.75495	1	12277	12277		20.947	0	1	1601700	+		34407	23210	22761	22771	39282	39282					0.1340560990265658
LRTLLQYLS	9	Unmodified	_LRTLLQYLS_					0	0	0		ENSG00000175595|ENST00000311895|ERCC4;nc|ENSG00000175595|Q92889-2|ERCC4	ENSG00000175595|ENST00000311895|ERCC4	ENSG00000175595|ENST00000311895|ERCC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8298950195312	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.75725	1	9047	9047		36.447	0.82846	1	6402500			34408	7027	22762	22772	39283	39283					0.10094577919812764
LRTLSGPRPG	10	Unmodified	_LRTLSGPRPG_					0	0	0			REV__nc|ENSG00000100593|Q6H9L7-5|ISM2	REV__nc|ENSG00000100593|Q6H9L7-5|ISM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3106689453125	2	527.311815	1052.60908	0.29221	0.00015408	-1.3979	-0.00073715	-1.1057	-0.00058307	527.3109426709796	80.891	0.85687	81.312	80.891	81.748	0.4215					62	20	4	0	0	0	0.57924	1	9285	9285		51.193	1.7511	1	2260400	+		34409	17205	22763	22773	39284	39284					0.08487656320039605
LRTLSGPRPG	10	Unmodified	_LRTLSGPRPG_					0	0	0			REV__nc|ENSG00000100593|Q6H9L7-5|ISM2	REV__nc|ENSG00000100593|Q6H9L7-5|ISM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.309326171875	2	527.311815	1052.60908	0.22805	0.00012025	-1.4606	-0.00077019	-1.2325	-0.00064993	527.3109109335428	80.785	0.86409	81.312	80.907	81.771	0.52676					54	20	3	0	0	0	0.49268	2	9302	9302;9348		56.434	12.317	1	2180000	+		34410	17205	22763	22773	39285;39286	39285					0.08487656320039605
LRTLTEEY	8	Unmodified	_LRTLTEEY_					0	0	0			REV__ENSG00000164068|ENST00000327697|RNF123	REV__ENSG00000164068|ENST00000327697|RNF123	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.768310546875	2	512.769114	1023.52368	-0.42239	-0.00021659	0.39367	0.00020186	-0.028724	-1.4729E-05	512.7691224162727	38.465	0.72042	38.476	38.195	38.915	0.010708					46	20	3	0	0	0	0.88944	1	2300	2300		57.811	3.035	1	407540	+		34411	21022	22764	22774	39287	39287					0.012854463437065533
LRTMLKKW	8	Unmodified	_LRTMLKKW_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3273315429688	2	538.325879	1074.63721	3.4335	0.0018483	-1.5588	-0.00083915	1.8747	0.0010092	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.89494	1	11170	11170		37.159	2.9866	1	75550000			34412	14615	22765	22775	39288	39288					0.10287262975771228
LRTMLKKW	8	Unmodified	_LRTMLKKW_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3246459960938	2	538.325879	1074.63721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.31	1	112.29	111.79	112.79	-0.025414								0	0	0	0.29245	1	12409	12409		30.504	2.4222	1				34413	14615	22765	22775	39289	39289					0.10287262975771228
LRTMLKKW	8	Unmodified	_LRTMLKKW_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3275756835938	2	538.325879	1074.63721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.93	1	112.91	112.41	113.41	-0.024811								0	0	0	0.29264	1	12488	12488		29.15	0	1				34414	14615	22765	22775	39290	39290					0.10287262975771228
LRTMLKKW	8	Unmodified	_LRTMLKKW_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3268432617188	2	538.325879	1074.63721	0.070634	3.8024E-05	1.6375	0.00088148	1.7081	0.00091951	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.84341	2	10807	10807;10830		31.955	4.0726	1	109840000			34415	14615	22765	22775	39291;39292	39291					0.10287262975771228
LRTMLKKW	8	Unmodified	_LRTMLKKW_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3270263671875	2	538.325879	1074.63721	0.84014	0.00045227	0.94305	0.00050767	1.7832	0.00095994	538.326371026974	100.85	3.8483	100.99	100.33	104.18	0.14352					341	94	6	0	0	0	0.87922	2	10812	10800;10812		38.806	4.0726	1	92159000			34416	14615	22765	22775	39293;39294	39294					0.10287262975771228
LRTMLKKW	8	Unmodified	_LRTMLKKW_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3258056640625	2	538.325879	1074.63721	0.83986	0.00045212	0.98173	0.00052849	1.8216	0.00098061	538.3262834832565	113.88	0.12846	113.94	113.86	113.99	0.063232					6	4	2	0	0	0	0.89043	1	12196	12196		35.618	8.8222	1	4099900			34417	14615	22765	22775	39295	39295					0.10287262975771228
LRTMLKKW	8	Unmodified	_LRTMLKKW_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8287353515625	2	538.325879	1074.63721	1.3454	0.00072427	0.53716	0.00028916	1.8826	0.0010134	538.3260218082069	100.6	2.6544	100.9	100.26	102.91	0.2999					222	70	6	0	0	0	0.87064	1	12286	12286		29.15	3.6994	1	18713000			34418	14615	22765	22775	39296	39296					0.10287262975771228
LRTMLKKW	8	Unmodified	_LRTMLKKW_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|23|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.326904296875	2	538.325879	1074.63721	1.8602	0.0010014	0.096504	5.1951E-05	1.9567	0.0010533	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.87479	1	12288	12288		30.504	1.3336	1	19391000			34419	14615	22765	22775	39297	39297					0.10287262975771228
LRTPKKRPPD	10	Unmodified	_LRTPKKRPPD_					0	0	0			REV__ENSG00000111667|ENST00000229268|USP5	REV__ENSG00000111667|ENST00000229268|USP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3661499023438	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.86763	1	12443	12443		26.693	1.1189	1	3346600	+		34420	17882	22766	22776	39298	39298					0.12459876308275852
LRTQVRGP	8	Unmodified	_LRTQVRGP_					0	0	0		nc|ENSG00000164252|Q8N302-2|AGGF1	nc|ENSG00000164252|Q8N302-2|AGGF1	nc|ENSG00000164252|Q8N302-2|AGGF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.7790832519531	2	463.780151	925.545748	-1.1455	-0.00053125	-0.84676	-0.00039271	-1.9922	-0.00092396	463.7795530361885	39.87	0.79184	39.876	39.598	40.39	0.0065002					32	19	3	0	0	0	0.87479	1	2492	2492		30.504	1.3336	1	252330			34421	15054	22767	22777	39299	39299					0.079997156028071
LRTRKETLWRL	11	Unmodified	_LRTRKETLWRL_					0	0	0		ENST00000427522.6_1_20:62190209-62190602:-|nuORF	ENST00000427522.6_1_20:62190209-62190602:-|nuORF	ENST00000427522.6_1_20:62190209-62190602:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.2992858886719	3	491.300048	1470.87832	-1.6433	-0.00080736	-0.22957	-0.00011279	-1.8729	-0.00092015	491.2998752438531	107.88	0.47935	107.92	107.49	107.97	0.036125					44	11	6	0	0	0	0.78683	1	11529	11529		14.086	1.1285	1	187950000			34422	11576	22768	22778	39300	39300					0.16171170216557584
LRTRKLLPLW	10	Unmodified	_LRTRKLLPLW_					0	0	0			REV__ENSG00000215251|ENST00000380266|FASTKD5	REV__ENSG00000215251|ENST00000380266|FASTKD5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3935546875	2	648.419157	1294.82376	0.94462	0.00061251	2.7745	0.001799	3.7191	0.0024116	648.4211371991393	106.96	0.4776	107.06	106.82	107.3	0.091255					20	11	3	0	0	0	0.37624	1	11489	11489		14.865	0	1	381490	+		34423	23679	22769	22779	39301	39301					0.1881420313579838
LRTRLLLNERQ	11	Unmodified	_LRTRLLLNERQ_					0	0	0			REV__ENST00000494080.5_1_11:64109984-64120281:+|nuORF	REV__ENST00000494080.5_1_11:64109984-64120281:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.28741455078125	3	471.28792	1410.84193	0.65402	0.00030823	-1.0176	-0.00047959	-0.36359	-0.00017135	471.28739779746195	22.716	0.83821	22.297	21.97	22.808	-0.41879					46	19	4	0	0	0	0.66858	1	953	953		36.528	3.4885	1	141220	+		34424	27710	22770	22780	39302	39302					0.1529429331983465
LRTRLLLNERQ	11	Unmodified	_LRTRLLLNERQ_					0	0	0			REV__ENST00000494080.5_1_11:64109984-64120281:+|nuORF	REV__ENST00000494080.5_1_11:64109984-64120281:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	471.28792	1410.84193	-0.21499	-0.00010132	-0.38647	-0.00018214	-0.60146	-0.00028346	471.28769232966624	22.752	0.75669	22.141	21.782	22.539	-0.6107	-0.077982	0.00060305	NaN	36.528	51	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	259280	+		34425	27710	22770	22780							0.1529429331983465
LRTRPPRAGH	10	Unmodified	_LRTRPPRAGH_					0	0	0			REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.8403930664062	2	580.841605	1159.66866	-0.70798	-0.00041123	-1.1298	-0.00065623	-1.8378	-0.0010675	580.8407660860938	69.805	0.83526	69.876	69.594	70.43	0.071045					106	41	3	0	0	0	0.86047	1	6322	6322		23.523	0	1	12587000	+		34426	28373	22771	22781	39303	39303					0.09520972054087906
LRTRRRPPKGM	11	Unmodified	_LRTRRRPPKGM_					0	0	0		ENSG00000167771|ENST00000301459|RCOR2	ENSG00000167771|ENST00000301459|RCOR2	ENSG00000167771|ENST00000301459|RCOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.61102294921875	3	456.61034	1366.80919	-0.35463	-0.00016193	3.7185	0.0016979	3.3639	0.001536	456.61192876380494	16.153	0.26143	16.073	15.955	16.216	-0.080017					20	10	3	0	0	0	0.76251	1	97	97		19.263	0	1	50824			34427	6330	22772	22782	39304	39304					0.1404580771595647
LRTRVLIP	8	Unmodified	_LRTRVLIP_					0	0	0		ENST00000373055.5_1_1:38175097-38175361:+|nuORF	ENST00000373055.5_1_1:38175097-38175361:+|nuORF	ENST00000373055.5_1_1:38175097-38175361:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.3233642578125	2	484.324194	966.633835	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.73	1	15.788	15.288	16.288	0.057872								0	0	0	0.29245	1	68	68		30.504	2.2494	1				34428	10726	22773	22783	39305	39305					0.149183361934206
LRTSGHPRGSI	11	Unmodified	_LRTSGHPRGSI_					0	0	0		ENST00000591084.5_3_19:36233501-36234996:-|nuORF;ENST00000587987.5_1_19:36233501-36235544:-|nuORF	ENST00000591084.5_3_19:36233501-36234996:-|nuORF	ENST00000591084.5_3_19:36233501-36234996:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.866455078125	2	590.830903	1179.64725	3.3785	0.0019961	1.5207	0.00089846	4.8991	0.0028946	590.8322787033321	103.95	0.25407	103.91	103.84	104.1	-0.043755					6	5	2	0	0	0	0.15571	1	11408	11408		42.338	0.91146	1	33098			34429	14203	22774	22784	39306	39306					0.0646154223470603
LRTSQRLRLV	10	Unmodified	_LRTSQRLRLV_					0	0	0		ENST00000513839.5_2_4:87515188-87515257:-|nuORF	ENST00000513839.5_2_4:87515188-87515257:-|nuORF	ENST00000513839.5_2_4:87515188-87515257:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3928833007812	2	621.39367	1240.77279	-0.28789	-0.0001789	-1.2764	-0.00079315	-1.5643	-0.00097204	621.392781910036	104.72	2.6015	104.71	104.23	106.84	-0.014809					230	61	5	0	0	0	0.8651	1	11398	11398		25.574	3.6142	1	11881000			34430	13062	22775	22785	39307	39307					0.16203254090919472
LRTSQRLRLV	10	Unmodified	_LRTSQRLRLV_					0	0	0		ENST00000513839.5_2_4:87515188-87515257:-|nuORF	ENST00000513839.5_2_4:87515188-87515257:-|nuORF	ENST00000513839.5_2_4:87515188-87515257:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.391845703125	2	621.39367	1240.77279	2.1086	0.0013103	-3.2264	-0.0020048	-1.1178	-0.00069459	621.3915992412323	104.3	2.0291	104.48	104.04	106.07	0.18888					138	51	4	0	0	0	0.77314	1	12707	12707		40.778	17.255	1	1168000			34431	13062	22775	22785	39308	39308					0.16203254090919472
LRTSYKKKTKS	11	Unmodified	_LRTSYKKKTKS_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	447.2730712890625	3	447.273388	1338.79833	-0.96193	-0.00043025	0.052197	2.3346E-05	-0.90974	-0.0004069	447.27334022942074	107.78	1.2569	107.78	106.62	107.87	0					73	29	4	0	0	0	0.75779	1	11225	11225		20.315	0	1	32868000			34432	6691	22776	22786	39309	39309					0.1424868382268869
LRTSYKKKTKS	11	Unmodified	_LRTSYKKKTKS_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	447.27325439453125	3	447.273388	1338.79833	-0.14506	-6.4881E-05	-0.89369	-0.00039972	-1.0388	-0.00046461	447.27291009171284	107.35	0.75623	107.31	106.86	107.62	-0.034401					76	17	5	0	0	0	0.73277	1	11680	11680		25.892	0	1	9872200			34433	6691	22776	22786	39310	39310					0.1424868382268869
LRTTPMKPLVL	11	Unmodified	_LRTTPMKPLVL_					0	0	0		ENST00000455873.7_2_15:69222974-69318872:+|nuORF	ENST00000455873.7_2_15:69222974-69318872:+|nuORF	ENST00000455873.7_2_15:69222974-69318872:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8930053710938	2	634.891583	1267.76861	-0.0069402	-4.4063E-06	1.3815	0.0008771	1.3746	0.00087269	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.55601	1	10909	10909		47.96	1.9873	1	31286000			34434	11960	22777	22787	39311	39311					0.1454402855299577
LRTVGETLTAS	11	Unmodified	_LRTVGETLTAS_					0	0	0			REV__nc|ENSG00000125485|Q9H8H2-4|DDX31	REV__nc|ENSG00000125485|Q9H8H2-4|DDX31	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3192749023438	2	574.319502	1146.62445	1.0954	0.0006291	-1.1095	-0.00063718	-0.01407	-8.0805E-06	574.3187099892803	94.307	4.5457	94.353	93.159	97.704	0.046173					261	107	4	0	0	0	0.69248	1	10003	10003		32.751	4.669	1	1593500	+		34435	18647	22778	22788	39312	39312					0.057004783265938386
LRTVKPAQSRL	11	Unmodified	_LRTVKPAQSRL_					0	0	0		ENST00000481773.1_1_3:113933257-113952219:+|nuORF	ENST00000481773.1_1_3:113933257-113952219:+|nuORF	ENST00000481773.1_1_3:113933257-113952219:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8927612304688	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.53361	1	11151	11151		49.536	1.8787	1	66671000			34436	12467	22779	22789	39313	39313					0.14927834371087556
LRTVKSALSD	10	Unmodified	_LRTVKSALSD_					0	0	0			REV__ENST00000479463.1_1_11:205819-207321:-|nuORF	REV__ENST00000479463.1_1_11:205819-207321:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.31640625	2	545.316763	1088.61897	0.15103	8.2357E-05	-0.42604	-0.00023233	-0.27501	-0.00014997	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.76096	1	8819	8819		41.427	3.6151	1	5755000	+		34437	22240	22780	22790	39314	39314					0.07820799534761136
LRTVKSALSD	10	Unmodified	_LRTVKSALSD_					0	0	0			REV__ENST00000479463.1_1_11:205819-207321:-|nuORF	REV__ENST00000479463.1_1_11:205819-207321:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3165283203125	2	545.316763	1088.61897	-1.3538	-0.00073823	1.329	0.00072474	-0.024734	-1.3488E-05	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.66675	1	10513	10513		46.457	7.2039	1	5184000	+		34438	22240	22780	22790	39315	39315					0.07820799534761136
LRTWMVGLPL	10	Unmodified	_LRTWMVGLPL_					0	0	0			REV__ENST00000362003.9_1_4:759867-759987:+|nuORF	REV__ENST00000362003.9_1_4:759867-759987:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.343994140625	2	593.344269	1184.67399	-0.64573	-0.00038314	0.93184	0.0005529	0.28611	0.00016976	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.86763	1	11199	11199		26.693	5.0072	1	2296600	+		34439	25519	22781	22791	39316	39316					0.08903514801681922
LRTWMVGLPL	10	Unmodified	_LRTWMVGLPL_					0	0	0			REV__ENST00000362003.9_1_4:759867-759987:+|nuORF	REV__ENST00000362003.9_1_4:759867-759987:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.3438720703125	2	593.344269	1184.67399	0.88437	0.00052473	-0.63613	-0.00037744	0.24824	0.00014729	593.343785503265	103.21	2.4131	103.4	103.04	105.46	0.18297					159	60	4	0	0	0	0.8608	2	10977	10940;10977		34.173	7.4796	1	4232500	+		34440	25519	22781	22791	39317;39318	39318					0.08903514801681922
LRTWMVGLPL	10	Unmodified	_LRTWMVGLPL_					0	0	0			REV__ENST00000362003.9_1_4:759867-759987:+|nuORF	REV__ENST00000362003.9_1_4:759867-759987:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.344482421875	2	593.344269	1184.67399	-1.311	-0.00077786	1.6747	0.00099366	0.36369	0.00021579	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.86587	1	10945	10945		29.17	1.2878	1	3957400	+		34441	25519	22781	22791	39319	39319					0.08903514801681922
LRVAPEEHPTL	11	Unmodified	_LRVAPEEHPTL_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.23443603515625	3	421.234822	1260.68264	-1.8197	-0.00076654	1.5001	0.00063188	-0.31968	-0.00013466	421.2353092560227	44.194	0.91113	44.194	43.898	44.809	0					49	21	3	0	0	0	0.27141	3	3193	3182;3193;3205		75.652	36.899	1	339410			34442	2370	22782	22792	39320;39321;39322	39321					0.06272159971854308
LRVAPEEHPTL	11	Unmodified	_LRVAPEEHPTL_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	631.347412109375	2	631.348594	1260.68264	-0.88454	-0.00055845	-0.22368	-0.00014122	-1.1082	-0.00069967	631.3483065134194	44.25	0.8012	44.25	43.938	44.739	0					33	18	3	0	0	0	0.57028	1	3189	3189		53.089	23.919	1	178260			34443	2370	22782	22792	39323	39323					0.06272159971854308
LRVAPEEHPTL	11	Unmodified	_LRVAPEEHPTL_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.23419189453125	3	421.234822	1260.68264	-1.0601	-0.00044655	0.26458	0.00011145	-0.79552	-0.0003351	421.2347059253395	44.378	0.92237	44.345	43.916	44.838	-0.033474					42	21	3	0	0	0	0.17527	1	3536	3536		80.916	35.008	1	181290			34444	2370	22782	22792	39324	39324					0.06272159971854308
LRVAPEEHPTL	11	Unmodified	_LRVAPEEHPTL_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.2340087890625	3	421.234822	1260.68264	1.7193	0.00072423	-2.2812	-0.00096093	-0.56192	-0.0002367	421.23358509266546	44.383	0.78658	44.381	44.008	44.794	-0.002449					42	18	3	0	0	0	0.43522	2	3475	3464;3475		56.632	0.7709	1	225560			34445	2370	22782	22792	39325;39326	39326					0.06272159971854308
LRVAPEEHPTL	11	Unmodified	_LRVAPEEHPTL_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.2347717285156	3	421.234822	1260.68264	0.22521	9.4866E-05	-0.2644	-0.00011137	-0.039189	-1.6508E-05	421.2345198926206	44.301	0.69176	44.35	44.089	44.781	0.048996					32	16	3	0	0	0	0.68431	1	3104	3104		34.087	1.0471	1	196630			34446	2370	22782	22792	39327	39327					0.06272159971854308
LRVAPEEHPTL	11	Unmodified	_LRVAPEEHPTL_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.2347717285156	3	421.234822	1260.68264	-0.32724	-0.00013784	0.039904	1.6809E-05	-0.28733	-0.00012104	421.23477191014837	44.365	0.64981	44.306	43.956	44.606	-0.058258					35	15	3	0	0	0	0.53461	1	3117	3117		49.466	5.815	1	156310			34447	2370	22782	22792	39328	39328					0.06272159971854308
LRVAPEEHPTL	11	Unmodified	_LRVAPEEHPTL_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2333679199219	3	421.234822	1260.68264	-0.62371	-0.00026273	-0.3056	-0.00012873	-0.9293	-0.00039145	421.2346416075368	43.238	0.61078	43.671	43.336	43.947	0.4334					42	14	4	0	0	0	0.38974	1	3885	3885		60.167	4.446	1	1359000			34448	2370	22782	22792	39329	39329					0.06272159971854308
LRVAPEEHPTL	11	Unmodified	_LRVAPEEHPTL_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.2347412109375	3	421.234822	1260.68264	-1.7566	-0.00073996	1.2671	0.00053375	-0.48953	-0.00020621	421.2352638615427	42.979	0.56604	43.676	43.381	43.947	0.69754					32	13	3	0	0	0	0.42858	1	3869	3869		57.149	19.641	1	1297300			34449	2370	22782	22792	39330	39330					0.06272159971854308
LRVAPEEHPTL	11	Unmodified	_LRVAPEEHPTL_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	421.234822	1260.68264	0.14455	6.089E-05	-0.85884	-0.00036177	-0.71429	-0.00030089	421.2343677361788	44.555	0.95454	44.532	44.097	45.052	-0.023079	0.17838	-0.0015716	NaN	80.916	32	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124490			34450	2370	22782	22792							0.06272159971854308
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.5751953125	3	420.575067	1258.70337	-1.7821	-0.00074949	2.4202	0.0010179	0.6381	0.00026837	420.5759554237421	46.857	0.86356	46.857	46.491	47.355	0					56	24	4	0	0	0	0.40952	4	3543	3533;3543;3555;3566		58.63	24.543	1	693050			34451	1338;8080;12043	22783	22793	39331;39332;39333;39334	39332					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	630.3587036132812	2	630.358962	1258.70337	-0.85219	-0.00053718	0.58124	0.00036639	-0.27094	-0.00017079	630.3592025122634	46.81	0.69195	46.81	46.535	47.227	0					41	18	3	0	0	0	0.36918	4	3573	3538;3550;3562;3573		49.536	21.896	1	361880			34452	1338;8080;12043	22783	22793	39335;39336;39337;39338	39338					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.3583374023438	2	630.358962	1258.70337	0.056128	3.5381E-05	-0.026209	-1.6521E-05	0.029919	1.886E-05	630.3588326082363	47.063	0.63663	47.049	46.719	47.355	-0.013821					33	16	3	0	0	0	0.55276	4	3808	3797;3808;3820;3830		38.754	16.454	1	311800			34453	1338;8080;12043	22783	22793	39339;39340;39341;39342	39340					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.5754699707031	3	420.575067	1258.70337	-0.87872	-0.00036957	1.7212	0.00072391	0.84251	0.00035434	420.57568384090274	46.88	0.74535	46.852	46.55	47.295	-0.027752					51	18	4	0	0	0	0.66009	2	3877	3864;3877		37.508	3.4217	1	789730			34454	1338;8080;12043	22783	22793	39343;39344	39344					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	630.3597412109375	2	630.358962	1258.70337	-0.73955	-0.00046618	0.51532	0.00032484	-0.22422	-0.00014134	630.3591337405683	46.855	0.58135	46.826	46.592	47.173	-0.028782					25	13	2	0	0	0	0.33562	3	3897	3874;3885;3897		56.434	29.386	1	278320			34455	1338;8080;12043	22783	22793	39345;39346;39347	39347					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.5753173828125	3	420.575067	1258.70337	2.2578	0.00094957	-1.5513	-0.00065242	0.70654	0.00029715	420.57436273463946	46.941	0.83286	46.937	46.593	47.426	-0.0041618					58	20	4	0	0	0	0.36918	2	3828	3805;3828		61.765	31.447	1	858330			34456	1338;8080;12043	22783	22793	39348;39349	39349					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	630.359619140625	2	630.358962	1258.70337	0.25322	0.00015962	-0.77832	-0.00049062	-0.5251	-0.000331	630.3583530121006	46.98	0.70532	46.976	46.637	47.342	-0.0041618					36	17	3	0	0	0	0.33092	3	3822	3822;3833;3844		49.536	21.654	1	254870			34457	1338;8080;12043	22783	22793	39350;39351;39352	39350					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.90936279296875	3	420.575067	1258.70337	-1.8483	-0.00077734	2.5733	0.0010823	0.72501	0.00030492	420.57607565100795	46.864	0.92207	46.883	46.533	47.455	0.018967					71	25	5	0	0	0	0.23706	5	3447	3437;3447;3455;3467;3477		77.533	42.355	1	1392800			34458	1338;8080;12043	22783	22793	39353;39354;39355;39356;39357	39354					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.3579711914062	2	630.358962	1258.70337	1.3322	0.00083973	-1.4046	-0.00088538	-0.072421	-4.5651E-05	630.3578781034934	46.804	0.71899	46.823	46.565	47.284	0.018967					42	19	3	0	0	0	0.383	1	3480	3480		51.528	37.391	1	498040			34459	1338;8080;12043	22783	22793	39358	39358					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.5745544433594	3	420.575067	1258.70337	0.24832	0.00010444	0.43062	0.00018111	0.67894	0.00028555	420.57514982697614	46.914	0.73291	46.953	46.582	47.315	0.038181					60	19	4	0	0	0	0.40952	4	3459	3448;3459;3469;3490		58.63	10.442	1	1274000			34460	1338;8080;12043	22783	22793	39359;39360;39361;39362	39360					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	630.3583984375	2	630.358962	1258.70337	0.44406	0.00027991	-0.57415	-0.00036192	-0.1301	-8.2007E-05	630.358458889314	46.888	0.6969	46.926	46.618	47.315	0.038185					40	18	3	0	0	0	0.44695	4	3470	3460;3470;3482;3503		40.058	12.176	1	490600			34461	1338;8080;12043	22783	22793	39363;39364;39365;39366	39364					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.5753479003906	3	420.575067	1258.70337	-0.42349	-0.00017811	1.0806	0.00045445	0.65706	0.00027635	420.5754266268904	46.91	0.91414	46.822	46.39	47.304	-0.087646					74	26	4	0	0	0	0.27141	4	3469	3448;3459;3469;3478		75.652	42.902	1	1050400			34462	1338;8080;12043	22783	22793	39367;39368;39369;39370	39369					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	630.357421875	2	630.358962	1258.70337	0.2707	0.00017064	-0.16742	-0.00010554	0.10328	6.5103E-05	630.3587234494281	46.939	0.62566	46.851	46.509	47.135	-0.087646					47	17	4	0	0	0	0.46531	2	3470	3470;3491		45.022	9.8702	1	514510			34463	1338;8080;12043	22783	22793	39371;39372	39371					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	630.3592529296875	2	630.358962	1258.70337	-0.50466	-0.00031812	0.2587	0.00016307	-0.24596	-0.00015505	630.3590316361008	45.489	0.65118	45.954	45.637	46.288	0.46561					48	15	5	0	0	0	0.10529	3	4221	4221;4233;4247		76.17	30.666	1	2887200			34464	1338;8080;12043	22783	22793	39373;39374;39375	39373					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.5751647949219	3	420.575067	1258.70337	-0.24128	-0.00010148	0.92731	0.00039	0.68603	0.00028853	420.5753949559437	45.518	0.89418	45.99	45.563	46.457	0.47139					60	21	4	0	0	0	0.30449	2	4237	4225;4237		73.841	24.165	1	5843600			34465	1338;8080;12043	22783	22793	39376;39377	39377					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	630.3588256835938	2	630.358962	1258.70337	0.33721	0.00021257	-0.87165	-0.00054945	-0.53444	-0.00033689	630.3583605858703	45.331	0.68452	46.226	45.923	46.607	0.89542					44	16	5	0	0	0	0.010615	3	4232	4209;4222;4232		82.75	46.304	1	3448500			34466	1338;8080;12043	22783	22793	39378;39379;39380	39380					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.5752258300781	3	420.575067	1258.70337	-0.54383	-0.00022872	1.0516	0.00044229	0.5078	0.00021357	420.57546939639207	45.331	0.80529	46.227	45.923	46.728	0.89542					57	19	5	0	0	0	0.03465	2	4213	4213;4225		105.17	43.474	1	6647800			34467	1338;8080;12043	22783	22793	39381;39382	39381					0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	420.575067	1258.70337	2.0526	0.00086328	-1.2858	-0.00054077	0.76683	0.00032251	420.5742428541258	45.819	0.28929	45.815	45.663	45.952	-0.0041618	-0.19564	-0.0028427	NaN	105.17	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35831			34468	1338;8080;12043	22783	22793							0.08436750351506817
LRVAPEEHPVL	11	Unmodified	_LRVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	630.358962	1258.70337	0.3113	0.00019623	-1.8535	-0.0011684	-1.5422	-0.00097215	630.3578523651938	45.775	0.30951	45.706	45.5	45.809	-0.068634	-0.25621	-0.0020088	NaN	82.75	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52371			34469	1338;8080;12043	22783	22793							0.08436750351506817
LRVAPRGGR	9	Unmodified	_LRVAPRGGR_					0	0	0		ENST00000534270.1_1_8:145742254-145742921:-|nuORF	ENST00000534270.1_1_8:145742254-145742921:-|nuORF	ENST00000534270.1_1_8:145742254-145742921:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.30511474609375	2	491.306867	980.599181	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.241	1	67.241	66.741	67.741	0								0	0	0	0.32159	1	5944	5944		23.042	0	1				34470	13405	22784	22794	39383	39383					0.10810513105320751
LRVCLKKLH	9	Unmodified	_LRVCLKKLH_					0	0	0		ENST00000336095.10_1_20:3914180-3914489:-|nuORF	ENST00000336095.10_1_20:3914180-3914489:-|nuORF	ENST00000336095.10_1_20:3914180-3914489:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.3531494140625	2	555.352428	1108.6903	3.1602	0.001755	-1.6086	-0.00089336	1.5516	0.00086167	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.78058	1	10939	10939		30.504	6.9809	1	5616800			34471	10166	22785	22795	39384	39384					0.14030640758414847
LRVDEINNKL	10	Unmodified	_LRVDEINNKL_					0	0	0			REV__nc|ENSG00000178950|O14976-2|GAK	REV__nc|ENSG00000178950|O14976-2|GAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	607.3484497070312	2	607.348594	1212.68264	-0.41742	-0.00025352	0.58948	0.00035802	0.17205	0.0001045	607.3487229250911	29.651	1.0493	29.622	29.343	30.392	-0.029207					45	23	3	0	0	0	0.80179	1	1889	1889		39.253	2.8061	1	430000	+		34472	22302	22786	22796	39385	39385					0.08480159971827561
LRVFRGNV	8	Unmodified	_LRVFRGNV_					0	0	0		nc|ENSG00000013374|Q9Y5A7-2|NUB1;ENSG00000013374|ENST00000568733|NUB1	nc|ENSG00000013374|Q9Y5A7-2|NUB1	nc|ENSG00000013374|Q9Y5A7-2|NUB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.7906494140625	2	480.790518	959.566484	0.86354	0.00041518	-0.98856	-0.00047529	-0.12502	-6.0107E-05	480.7899572567855	21.451	0.54212	21.519	21.327	21.869	0.068251					23	16	2	0	0	0	0.86791	1	581	581		28.254	1.4582	1	32091			34473	809	22787	22797	39386	39386					0.085083059824683
LRVGRPVL	8	Unmodified	_LRVGRPVL_					0	0	0		ENST00000418210.2_1_8:91657672-91657804:-|nuORF	ENST00000418210.2_1_8:91657672-91657804:-|nuORF	ENST00000418210.2_1_8:91657672-91657804:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6085510253906	2	455.303262	908.59197	-0.1932	-8.7965E-05	0.18596	8.4668E-05	-0.0072413	-3.297E-06	455.3032218792948	70.635	1.5808	71.183	70.654	72.235	0.54756					57	38	2	0	0	0	0.4196	1	7843	7843		50.025	16.509	1	173780			34474	11419	22788	22798	39387	39387					0.1340178050488703
LRVICFVG	8	Unmodified	_LRVICFVG_					0	0	0		nc|ENSG00000102038|P28370-2|SMARCA1;nc|ENSG00000102038|P28370|SMARCA1;ENSG00000102038|ENST00000371121|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.7651062011719	2	453.765123	905.515694	0.21911	9.9423E-05	1.0227	0.00046406	1.2418	0.00056348	453.7653867501488	40.992	0.89008	41.065	40.735	41.626	0.073414					74	28	3	0	0	0	0.86791	1	2667	2667		28.254	0	1	782930			34475	1982	22789	22799	39388	39388					0.0591564061326153
LRVNAVHS	8	Unmodified	_LRVNAVHS_					0	0	0			REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.2586669921875	2	448.259051	894.503549	-0.14479	-6.4903E-05	0.23556	0.00010559	0.090768	4.0688E-05	448.2590720568145	87.527	2.8574	87.595	85.815	88.673	0.067711					114	66	2	0	0	0	0.7961	1	8839	8839		17.365	0.89182	1	324470	+		34476	24539	22790	22800	39389	39389					0.05207740194418875
LRVNAVHS	8	Unmodified	_LRVNAVHS_					0	0	0			REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	448.259051	894.503549	-1.1817	-0.00052971	1.3199	0.00059164	0.13817	6.1935E-05	448.2595721042995	87.603	2.3529	87.603	87.119	89.472	0	0.11549	0.00077223	NaN	17.365	76	54	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	222300	+		34477	24539	22790	22800							0.05207740194418875
LRVNAVHS	8	Unmodified	_LRVNAVHS_					0	0	0			REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	448.259051	894.503549	-0.14479	-6.4903E-05	0.23556	0.00010559	0.090768	4.0688E-05	448.2590720568145	87.527	2.8574	87.595	85.815	88.673	0.067711	0.10677	-0.00019988	NaN	17.365	114	66	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	324470	+		34478	24539	22790	22800							0.05207740194418875
LRVNAVHS	8	Unmodified	_LRVNAVHS_					0	0	0			REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	448.259051	894.503549	1.081	0.00048457	-0.98013	-0.00043935	0.10088	4.5222E-05	448.25853095851693	87.475	2.8215	87.401	86.397	89.218	-0.074005	-0.087066	-0.0012898	NaN	17.365	99	66	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	324070	+		34479	24539	22790	22800							0.05207740194418875
LRVNAVHS	8	Unmodified	_LRVNAVHS_					0	0	0			REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	448.259051	894.503549	-1.2968	-0.0005813	1.3094	0.00058694	0.012562	5.6312E-06	448.2596026216771	87.197	1.0732	87.392	86.807	87.88	0.19488	-0.095782	0.00076281	NaN	17.365	53	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	308260	+		34480	24539	22790	22800							0.05207740194418875
LRVNAVHS	8	Unmodified	_LRVNAVHS_					0	0	0			REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	448.259051	894.503549	0.63212	0.00028335	-0.5961	-0.00026721	0.036019	1.6146E-05	448.25870527054315	87.334	2.015	87.483	86.827	88.842	0.14956	-0.0047565	-0.00094547	NaN	17.365	73	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	249730	+		34481	24539	22790	22800							0.05207740194418875
LRVNAVHS	8	Unmodified	_LRVNAVHS_					0	0	0			REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	448.259051	894.503549	-1.7582	-0.00078811	1.7759	0.00079607	0.017763	7.9625E-06	448.25978188065824	87.197	0.95171	87.362	86.868	87.819	0.16473	-0.12571	0.0011811	NaN	17.365	45	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	207410	+		34482	24539	22790	22800							0.05207740194418875
LRVNAVHS	8	Unmodified	_LRVNAVHS_					0	0	0			REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	REV__ENST00000272102.9_1_1:228285748-228285790:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	448.259051	894.503549	-0.35743	-0.00016022	0.52745	0.00023644	0.17003	7.6215E-05	448.2591796288449	87.133	1.286	87.579	86.855	88.141	0.44628	0.091062	6.1817E-05	NaN	17.365	51	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	242430	+		34483	24539	22790	22800							0.05207740194418875
LRVPDAKHR	9	Unmodified	_LRVPDAKHR_					0	0	0		ENST00000399831.7_1_8:38965091-38975631:+|nuORF	ENST00000399831.7_1_8:38965091-38975631:+|nuORF	ENST00000399831.7_1_8:38965091-38975631:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8401489257812	2	546.325257	1090.63596	-1.4641	-0.00079985	1.6143	0.00088191	0.15021	8.2063E-05	546.8272460979188	101.6	0.38931	101.76	101.65	102.04	0.15505					9	8	2	0	0	0	0.20789	1	10628	10628		34.173	1.3601	1	73931			34484	11213	22791	22801	39390	39390					0.09426764931208709
LRVPLRFPAGS	11	Unmodified	_LRVPLRFPAGS_					0	0	0		ENST00000257663.3_1_7:77423607-77427674:-|nuORF	ENST00000257663.3_1_7:77423607-77427674:-|nuORF	ENST00000257663.3_1_7:77423607-77427674:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2397155761719	3	404.911902	1211.71388	0.2183	8.8391E-05	1.9649	0.00079559	2.1832	0.00088399	405.2460993756703	27.662	0.078342	27.69	27.647	27.725	0.02817					5	3	2	0	0	0	0.1767	1	1113	1113		18.531	11.512	1	46963			34485	9357	22792	22802	39391	39391					0.11648777796608556
LRVPLYVSYV	10	Unmodified	_LRVPLYVSYV_					0	0	0		ENSG00000150893|ENST00000280481|FREM2	ENSG00000150893|ENST00000280481|FREM2	ENSG00000150893|ENST00000280481|FREM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.5747985839844	3	403.572775	1207.69649	2.802	0.0011308	2.3277	0.00093941	5.1297	0.0020702	403.5736497882377	83.618	2.5639	83.677	83.026	85.59	0.059258					112	58	3	0	0	0	0.86409	1	8409	8409		25.126	1.7481	1	261970			34486	5085	22793	22803	39392	39392					0.10095437470931756
LRVQGSLQ	8	Unmodified	_LRVQGSLQ_					0	0	0			REV__nc|ENSG00000090534|P40225-3|THPO	REV__nc|ENSG00000090534|P40225-3|THPO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7672119140625	2	450.766709	899.518865	0.88047	0.00039689	-1.1594	-0.00052261	-0.27891	-0.00012573	450.7660426602437	28.114	0.87881	28.091	27.56	28.439	-0.023556					32	20	2	0	0	0	0.90983	1	1331	1331		42.396	5.237	1	37151	+		34487	16990	22794	22804	39393	39393					0.06508606991610577
LRVQGSLQ	8	Unmodified	_LRVQGSLQ_					0	0	0			REV__nc|ENSG00000090534|P40225-3|THPO	REV__nc|ENSG00000090534|P40225-3|THPO	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	450.766709	899.518865	0.37083	0.00016716	-0.084704	-3.8182E-05	0.28613	0.00012898	450.7665873768509	27.968	0.58001	28.004	27.761	28.341	0.03607	-0.092844	0.00047637	NaN	42.396	22	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27942	+		34488	16990	22794	22804							0.06508606991610577
LRVQGSLQ	8	Unmodified	_LRVQGSLQ_					0	0	0			REV__nc|ENSG00000090534|P40225-3|THPO	REV__nc|ENSG00000090534|P40225-3|THPO	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	450.766709	899.518865	-0.31462	-0.00014182	-0.20302	-9.1517E-05	-0.51764	-0.00023333	450.7667259275384	28.035	0.91334	27.997	27.391	28.305	-0.038525	-0.099699	0.0003697	NaN	42.396	26	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22658	+		34489	16990	22794	22804							0.06508606991610577
LRVQGSLQ	8	Unmodified	_LRVQGSLQ_					0	0	0			REV__nc|ENSG00000090534|P40225-3|THPO	REV__nc|ENSG00000090534|P40225-3|THPO	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	450.766709	899.518865	0.91495	0.00041243	-1.3144	-0.0005925	-0.39947	-0.00018007	450.76628155342473	28.468	0.51454	28.295	28.16	28.674	-0.17336	0.19827	-0.00063226	NaN	42.396	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37984	+		34490	16990	22794	22804							0.06508606991610577
LRVQKIRPSIL	11	Unmodified	_LRVQKIRPSIL_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP;ENST00000488537.1_1_1:145440216-145440639:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.6276550292969	3	441.625873	1321.85579	0.58341	0.00025765	-0.47602	-0.00021022	0.10739	4.7426E-05	441.62561206833976	15.451	0.27005	15.427	15.297	15.567	-0.024207					16	7	3	0	0	0	0.71803	1	30	30		28.577	2.5133	1	188620			34491	8948	22795	22805	39394	39394					0.20773570818914777
LRVRHHTN	8	Unmodified	_LRVRHHTN_					0	0	0			REV__ENST00000466935.1_1_22:21996661-21997389:+|nuORF	REV__ENST00000466935.1_1_22:21996661-21997389:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.79345703125	2	516.794124	1031.57369	1.557	0.00080467	-2.8332	-0.0014642	-1.2762	-0.00065953	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.88601	1	9234	9234		34.173	3.6689	1	834930	+		34492	18764	22796	22806	39395	39395					0.05917038582902023
LRVVPCLLN	9	Unmodified	_LRVVPCLLN_					0	0	0			REV__ENST00000519256.5_1_5:170585477-170669877:+|nuORF	REV__ENST00000519256.5_1_5:170585477-170669877:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.80859375	2	513.810062	1025.60557	-1.4174	-0.00072826	-0.72923	-0.00037469	-2.1466	-0.0011029	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.7932	1	4191	4191		24.203	4.8428	1	1977600	+		34493	28076	22797	22807	39396	39396					0.09379270221825209
LRVVSVLLMV	10	Unmodified	_LRVVSVLLMV_					0	0	0			REV__ENST00000526148.5_2_11:10829222-10829513:-|nuORF	REV__ENST00000526148.5_2_11:10829222-10829513:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.8475341796875	2	564.862295	1127.71004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118	1	118	117.5	118.5	0								0	0	0	0.45132	1	12035	12035		10.265	0.5596	1		+		34494	28200	22798	22808	39397	39397					0.15128971978515438
LRVVTQPLPFV	11	Unmodified	_LRVVTQPLPFV_					0	0	0		ENST00000531863.5_1_11:66276783-66276999:+|nuORF	ENST00000531863.5_1_11:66276783-66276999:+|nuORF	ENST00000531863.5_1_11:66276783-66276999:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.59783935546875	3	423.595691	1267.76524	2.8995	0.0012282	1.7133	0.00072574	4.6128	0.0019539	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.76322	1	11685	11685		17.167	5.5308	1	6928400			34495	13365	22799	22809	39398	39398					0.14207101770648478
LRVVTQPLPFV	11	Unmodified	_LRVVTQPLPFV_					0	0	0		ENST00000531863.5_1_11:66276783-66276999:+|nuORF	ENST00000531863.5_1_11:66276783-66276999:+|nuORF	ENST00000531863.5_1_11:66276783-66276999:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.893310546875	2	634.889898	1267.76524	1.3476	0.00085558	2.8664	0.0018198	4.214	0.0026754	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.7144	1	11743	11743		29.17	0.020503	1	42647000			34496	13365	22799	22809	39399	39399					0.14207101770648478
LRVVVPDW	8	Unmodified	_LRVVVPDW_					0	0	0		ENST00000580624.1_1_17:64172908-64188196:-|nuORF	ENST00000580624.1_1_17:64172908-64188196:-|nuORF	ENST00000580624.1_1_17:64172908-64188196:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.2860412597656	2	492.287277	982.560001	-1.6401	-0.00080739	2.8106	0.0013836	1.1705	0.00057621	492.28857116044475	110.09	1.3447	110.1	109.92	111.27	0.0060425					56	47	2	0	0	0	0.884	1	11839	11839		33.516	6.7195	1	199940			34497	14097	22800	22810	39400	39400					0.06802368031083006
LRWFEKEVLET	11	Unmodified	_LRWFEKEVLET_					0	0	0			REV__nc|ENSG00000012817|Q9BY66-2|KDM5D;REV__ENSG00000117139|ENST00000367265|KDM5B;REV__nc|ENSG00000126012|P41229-2|KDM5C	REV__nc|ENSG00000126012|P41229-2|KDM5C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.9295654296875	3	483.929398	1448.76637	0.50406	0.00024393	0.039912	1.9315E-05	0.54397	0.00026324	483.929256572085	26.832	0.76089	26.873	26.47	27.231	0.040834					55	23	3	0	0	0	0.76892	1	1148	1148		17.833	0	1	112950	+		34498	18692;16191;18247	22801	22811	39401	39401					0.05993271348893359
LRWLRWGPLL	10	Unmodified	_LRWLRWGPLL_					0	0	0		ENST00000560078.1_1_15:41106223-41106421:+|nuORF	ENST00000560078.1_1_15:41106223-41106421:+|nuORF	ENST00000560078.1_1_15:41106223-41106421:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.6022033691406	3	437.267909	1308.7819	1.1681	0.00051075	-1.2795	-0.00055948	-0.11144	-4.8727E-05	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.85441	1	4615	4615		20.837	2.3061	1	4130900			34499	13813	22802	22812	39402	39402					0.13985647447270821
LRWLTEKRTRL	11	Unmodified	_LRWLTEKRTRL_					0	0	0			REV__ENST00000427522.6_1_20:62190209-62190602:-|nuORF	REV__ENST00000427522.6_1_20:62190209-62190602:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.6306457519531	3	491.300048	1470.87832	-0.62565	-0.00030738	-0.84487	-0.00041508	-1.4705	-0.00072246	491.29948464840265	111.63	0.32854	111.74	111.48	111.81	0.11118					17	8	3	0	0	0	0.79224	1	12004	12004		12.957	2.3707	1	2735700	+		34500	26563	22803	22813	39403	39403					0.16171170216534847
LRWPLESA	8	Unmodified	_LRWPLESA_					0	0	0		ENSG00000283071|ENST00000634353|LBHD2	ENSG00000283071|ENST00000634353|LBHD2	ENSG00000283071|ENST00000634353|LBHD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.2669982910156	2	486.269084	970.523616	-0.74239	-0.000361	-3.432	-0.0016689	-4.1744	-0.0020299	486.2673170980509	86.118	3.9821	86.565	85.471	89.453	0.44736					252	97	4	0	0	0	0.89043	1	10055	10055		35.618	1.4457	1	1474100			34501	9058	22804	22814	39404	39404					0.0371749113437545
LRYDEIEGK	9	Unmodified	_LRYDEIEGK_					0	0	0			REV__ENSG00000138035|ENST00000447944|PNPT1;REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	REV__ENSG00000138035|ENST00000447944|PNPT1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.7079467773438	2	561.793121	1121.57169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.887	1	78.939	78.439	79.439	0.051674								0	0	0	0.29134	1	7772	7772		34.173	0.25091	1		+		34502	19431;24369	22805	22815	39405	39405					0.0157652026375672
LRYFKRFSHWR	11	Unmodified	_LRYFKRFSHWR_					0	0	0			REV__chr9:123769563-123878951|22|12.82|0.3|5.42|-|1|DENND1A,DENND1A|1	REV__chr9:123769563-123878951|22|12.82|0.3|5.42|-|1|DENND1A,DENND1A|1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.63232421875	3	532.628388	1594.86333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.363	1	32.357	31.857	32.857	-0.0061455								0	0	0	0.56276	1	1833	1833		9.6461	3.6451	1		+		34503	15929	22806	22816	39406	39406					0.08969723139193775
LRYIVHLCS	9	Unmodified	_LRYIVHLCS_					0	0	0			REV__ENST00000400274.5_1_21:47879084-47910515:+|nuORF	REV__ENST00000400274.5_1_21:47879084-47910515:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3053588867188	2	552.305144	1102.59573	2.2801	0.0012593	0.10903	6.022E-05	2.3891	0.0013195	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.78058	1	9860	9860		30.504	1.3336	1	1797400	+		34504	26246	22807	22817	39407	39407					0.048540822164113706
LRYPAPPPSN	10	Unmodified	_LRYPAPPPSN_					0	0	0		ENST00000533068.5_1_11:14541661-14541974:-|nuORF	ENST00000533068.5_1_11:14541661-14541974:-|nuORF	ENST00000533068.5_1_11:14541661-14541974:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.36474609375	2	556.298373	1110.58219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.106	1	15.619	15.119	16.119	-0.48718								0	0	0	0.45132	1	88	88		18.262	0	1				34505	13389	22808	22818	39408	39408					0.03132547708855782
LSAALLVGP	9	Unmodified	_LSAALLVGP_					0	0	0		ENST00000572621.5_2_17:1587830-1587986:-|nuORF	ENST00000572621.5_2_17:1587830-1587986:-|nuORF	ENST00000572621.5_2_17:1587830-1587986:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.76483154296875	2	420.763104	839.511654	-0.10506	-4.4205E-05	3.4811	0.0014647	3.3761	0.0014205	420.7645106071965	37.974	0.52336	37.916	37.695	38.219	-0.057915					24	16	2	0	0	0	0.7932	1	2216	2216		26.796	0	1	84095			34506	14013	22809	22819	39409	39409					0.08547874391183541
LSAAVGHLSLL	11	Unmodified	_LSAAVGHLSLL_					0	0	0			REV__ENSG00000144847|ENST00000393775|IGSF11	REV__ENSG00000144847|ENST00000393775|IGSF11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8245849609375	2	540.824224	1079.63389	0.58695	0.00031744	-0.090961	-4.9194E-05	0.49599	0.00026824	540.8239609678685	33.21	1.2641	33.421	32.636	33.901	0.21168					46	29	3	0	0	0	0.7342	1	2397	2397		25.574	0	1	1137300	+		34507	19915	22810	22820	39410	39410					0.09726291402762399
LSAAYGPTVI	10	Unmodified	_LSAAYGPTVI_					0	0	0			REV__ENSG00000154262|ENST00000284425|ABCA6	REV__ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.27655029296875	2	496.276575	990.538597	-0.27664	-0.00013729	0.2429	0.00012054	-0.033741	-1.6745E-05	496.2765471040174	77.31	0.63611	77.715	77.465	78.101	0.40531					39	14	4	0	0	0	0.46422	1	8795	8795		58.782	2.0609	1	1018000	+		34508	20377	22811	22821	39411	39411					0.04294938211717181
LSAELGLRQP	10	Unmodified	_LSAELGLRQP_					0	0	0		ENSG00000122863|ENST00000373115|CHST3	ENSG00000122863|ENST00000373115|CHST3	ENSG00000122863|ENST00000373115|CHST3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.2761840820312	2	542.31148	1082.60841	-0.1714	-9.2954E-05	2.6314	0.0014271	2.46	0.0013341	542.3124300361005	55.054	0.62776	55.455	55.112	55.74	0.40101					21	14	2	0	0	0	0.37624	1	5611	5611		25.574	0	1	130970			34509	3250	22812	22822	39412	39412					0.07040816880316925
LSAFYWIDRVN	11	Unmodified	_LSAFYWIDRVN_					0	0	0		ENSG00000196584|ENST00000359321|XRCC2	ENSG00000196584|ENST00000359321|XRCC2	ENSG00000196584|ENST00000359321|XRCC2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.9483642578125	3	461.906705	1382.69829	-1.7389	-0.00080323	0.93293	0.00043093	-0.80601	-0.0003723	461.90784381955467	107.67	0.21362	107.7	107.54	107.75	0.036125					6	4	2	0	0	0	0.17396	1	11480	11480		38.714	11.964	1	56582			34510	8076	22813	22823	39413	39413					0.02224446488889953
LSAIIPLPEV	10	Unmodified	_LSAIIPLPEV_					0	0	0		ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3268432617188	2	526.323525	1050.6325	-0.18304	-9.6338E-05	2.014	0.00106	1.8309	0.00096366	526.324520166758	61.08	1.3849	61.181	59.837	61.222	0.10082					92	55	2	0	0	0	0.86718	1	5264	5264		27.882	7.8855	1	275350			34511	6237	22814	22824	39414	39414					0.10920657313999982
LSAIPGSVV	9	Unmodified	_LSAIPGSVV_					0	0	0		nc|ENSG00000184226|Q9HC56-2|PCDH9;ENSG00000184226|ENST00000377865|PCDH9	nc|ENSG00000184226|Q9HC56-2|PCDH9	nc|ENSG00000184226|Q9HC56-2|PCDH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.7513122558594	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.74721	1	7278	7278		37.159	6.6555	1	423780			34512	7594	22815	22825	39415	39415					0.06383284011531032
LSAKEFGLL	9	Unmodified	_LSAKEFGLL_					0	0	0		nc|ENSG00000075292|Q14966-5|ZNF638;ENSG00000075292|ENST00000264447|ZNF638;nc|ENSG00000075292|Q14966-3|ZNF638	nc|ENSG00000075292|Q14966-5|ZNF638	nc|ENSG00000075292|Q14966-5|ZNF638	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.2008361816406	2	489.286943	976.559333	-0.42246	-0.00020671	-0.063377	-3.101E-05	-0.48584	-0.00023772	489.2865714018518	53.653	0.62875	54.238	53.914	54.543	0.58474					22	14	2	0	0	0	0.20789	1	5485	5485		29.17	0	1	179830			34513	1330	22816	22826	39416	39416					0.07011528591397109
LSALSFTT	8	Unmodified	_LSALSFTT_					0	0	0			REV__ENSG00000167487|ENST00000300976|KLHL26	REV__ENSG00000167487|ENST00000300976|KLHL26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2274169921875	2	420.229094	838.443634	0.53933	0.00022664	-3.4769	-0.0014611	-2.9375	-0.0012344	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.92457	1	7550	7550		47.916	5.4411	1	678130	+		34514	21389	22817	22827	39417	39417					0.017950047405179248
LSALVSYLPL	10	Unmodified	_LSALVSYLPL_					0	0	0		ENSG00000188822|ENST00000374472|CNR2	ENSG00000188822|ENST00000374472|CNR2	ENSG00000188822|ENST00000374472|CNR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.325439453125	2	538.323525	1074.6325	3.4335	0.0018483	2.8142	0.001515	6.2477	0.0033633	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.85934	1	11280	11280		35.618	6.4687	1	75550000			34515	7964	22818	22828	39418	39418					0.09816657313990618
LSAMKETVL	9	Unmodified	_LSAMKETVL_					0	0	0			REV__ENST00000358657.7_1_12:51901252-51901492:+|nuORF	REV__ENST00000358657.7_1_12:51901252-51901492:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.2763977050781	2	496.27826	990.541968	-0.27664	-0.00013729	-3.1532	-0.0015649	-3.4298	-0.0017022	496.2765471040174	77.31	0.63611	77.715	77.465	78.101	0.40531					39	14	4	0	0	0	0.19818	2	8784	8784;8807		74.255	5.4682	1	1018000	+		34516	25439	22819	22829	39419;39420	39419					0.046318649940758405
LSANELHLVAL	11	Unmodified	_LSANELHLVAL_					0	0	0			REV__ENSG00000104866|ENST00000221462|PPP1R37	REV__ENSG00000104866|ENST00000221462|PPP1R37	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.7199096679688	2	590.340238	1178.66592	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.279	1	68.243	67.743	68.743	-0.036301								0	0	0	0.56276	1	6580	6580		35.152	5.6013	1		+		34517	17483	22820	22830	39421	39421					0.08373659085918916
LSARFGRVTGQ	11	Unmodified	_LSARFGRVTGQ_					0	0	0		ENST00000367080.7_1_1:207226634-207228103:+|nuORF	ENST00000367080.7_1_1:207226634-207228103:+|nuORF	ENST00000367080.7_1_1:207226634-207228103:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.3328247070312	2	596.333279	1190.652	1.5761	0.00093988	-2.1147	-0.0012611	-0.53864	-0.00032121	596.3318720869813	95.913	2.9437	96.333	95.271	98.215	0.4205					211	71	4	0	0	0	0.6493	1	11425	11425		38.754	3.1353	1	1079900			34518	10531	22821	22831	39422	39422					0.06430426377482945
LSARQRFAKG	10	Unmodified	_LSARQRFAKG_					0	0	0			REV__nc|ENSG00000197128|Q68DY9-2|ZNF772	REV__nc|ENSG00000197128|Q68DY9-2|ZNF772	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3294677734375	2	567.330539	1132.64652	-1.3957	-0.00079181	0.07479	4.2431E-05	-1.3209	-0.00074938	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86718	1	9786	9786		27.882	1.1893	1	17338000	+		34519	23187	22822	22832	39423	39423					0.08550747585650242
LSASILRESID	11	Unmodified	_LSASILRESID_					0	0	0			REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000075391|Q9UJF2|RASAL2	REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.221923828125	3	401.890832	1202.65067	-0.0258	-1.0369E-05	-1.8639	-0.00074907	-1.8897	-0.00075944	402.2248439643617	30.765	0.21703	30.768	30.667	30.884	0.0037193					6	4	2	0	0	0	0.1729	1	2061	2061		12.957	0	1	36868	+		34520	19340;16710	22823	22833	39424	39424					0.057447474980335755
LSASVAAPP	9	Unmodified	_LSASVAAPP_					0	0	0			REV__ENST00000609407.1_1_10:43633455-43633626:-|nuORF	REV__ENST00000609407.1_1_10:43633455-43633626:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7286682128906	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.7932	1	7468	7468		24.203	1.1603	1	159770	+		34521	29414	22824	22834	39425	39425					0.030704244603725783
LSATLLPP	8	Unmodified	_LSATLLPP_					0	0	0			REV__ENST00000409910.1_1_2:238337826-238341739:-|nuORF	REV__ENST00000409910.1_1_2:238337826-238341739:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2481689453125	2	406.249829	810.485105	-0.96192	-0.00039078	-1.7817	-0.00072381	-2.7436	-0.0011146	406.24902234521767	111.59	0.90381	111.59	111.1	112	0					62	31	3	0	0	0	0.81548	1	11594	11594		20.482	1.1219	1	63667	+		34522	26359	22825	22835	39426	39426					0.07228185499855044
LSAVLFLNR	9	Unmodified	_LSAVLFLNR_					0	0	0		ENST00000261847.7_1_15:49288578-49288626:-|nuORF	ENST00000261847.7_1_15:49288578-49288626:-|nuORF	ENST00000261847.7_1_15:49288578-49288626:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.8148193359375	2	516.813659	1031.61277	-1.0727	-0.00055441	2.1212	0.0010962	1.0484	0.00054183	516.8146800707337	36.387	1.5803	36.396	35.568	37.148	0.0092773					63	34	2	0	0	0	0.77546	1	2338	2338		31.955	1.6371	1	103340			34523	9420	22826	22836	39427	39427					0.09822326093899392
LSCFPDIW	8	Unmodified	_LSCFPDIW_					0	0	0		ENST00000392062.6_1_2:227729383-227729434:+|nuORF	ENST00000392062.6_1_2:227729383-227729434:+|nuORF	ENST00000392062.6_1_2:227729383-227729434:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2164001464844	2	490.730946	979.447339	0.46168	0.00022656	-1.4445	-0.00070886	-0.98282	-0.0004823	490.73111240449384	29.259	0.25965	29.086	28.89	29.15	-0.17336					8	5	2	0	0	0	0.4196	1	1847	1847		44.531	7.372	1	39599			34524	11012	22827	22837	39428	39428					-0.04320648757277468
LSCFPPDPDP	10	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))FPPDPDP_	LSC(1)FPPDPDP		LSC(66)FPPDPDP		0	1	0		ENST00000463765.1_1_9:139887895-139888254:+|nuORF	ENST00000463765.1_1_9:139887895-139888254:+|nuORF	ENST00000463765.1_1_9:139887895-139888254:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.7534790039062	2	572.752607	1143.49066	-0.706	-0.00040437	0.28827	0.0001651	-0.41774	-0.00023926	572.7529881567372	56.524	0.69558	56.92	56.676	57.371	0.39672					25	15	2	0	0	0	0.37206	1	5843	5843		66.429	6.311	1	662010			34525	12076	22828	22838	39429	39429	151				-0.07534503770671108
LSCFPPDPDP	10	Carbamidomethyl (C)	_LSC(Carbamidomethyl (C))FPPDPDP_					0	1	0		ENST00000463765.1_1_9:139887895-139888254:+|nuORF	ENST00000463765.1_1_9:139887895-139888254:+|nuORF	ENST00000463765.1_1_9:139887895-139888254:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	572.752607	1143.49066	0.64627	0.00037015	-0.90929	-0.0005208	-0.26303	-0.00015065	572.7522849290502	56.428	0.74172	56.988	56.659	57.401	0.55954	0.033798	-0.00056206	NaN	66.429	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	610850			34526	12076	22828	22838			151				-0.07534503770671108
LSCLKTLVR	9	Unmodified	_LSCLKTLVR_					0	0	0		ENST00000465761.1_1_20:43561720-43565607:+|nuORF	ENST00000465761.1_1_20:43561720-43565607:+|nuORF	ENST00000465761.1_1_20:43561720-43565607:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.8155517578125	2	516.815344	1031.61614	0.036419	1.8822E-05	-2.5257	-0.0013053	-2.4893	-0.0012865	516.8140730356591	36.519	1.4394	36.5	35.692	37.132	-0.018677					63	31	4	0	0	0	0.58668	1	2335	2335		47.657	6.8792	1	124480			34527	12115	22829	22839	39430	39430					0.10159252876246683
LSDIGSGIRY	10	Unmodified	_LSDIGSGIRY_					0	0	0		ENSG00000213341|ENST00000370397|CHUK	ENSG00000213341|ENST00000370397|CHUK	ENSG00000213341|ENST00000370397|CHUK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.7859497070312	2	540.787838	1079.56112	0.197	0.00010654	1.2787	0.00069152	1.4757	0.00079805	540.7873220191991	53.505	0.45079	53.48	53.238	53.689	-0.02475					16	10	2	0	0	0	0.26675	1	4780	4780		76.17	21.393	1	97160			34528	8585	22830	22840	39431	39431					0.024525376093379236
LSDIGSGIRY	10	Unmodified	_LSDIGSGIRY_					0	0	0		ENSG00000213341|ENST00000370397|CHUK	ENSG00000213341|ENST00000370397|CHUK	ENSG00000213341|ENST00000370397|CHUK	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	540.787838	1079.56112	-0.14943	-8.0811E-05	2.6452	0.0014305	2.4958	0.0013497	540.787542973415	53.641	0.49361	53.636	53.314	53.807	-0.0053711	0.078385	0.0011659	NaN	76.17	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73556			34529	8585	22830	22840							0.024525376093379236
LSDIGSGIRY	10	Unmodified	_LSDIGSGIRY_					0	0	0		ENSG00000213341|ENST00000370397|CHUK	ENSG00000213341|ENST00000370397|CHUK	ENSG00000213341|ENST00000370397|CHUK	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	540.787838	1079.56112	0.23933	0.00012943	1.0504	0.00056807	1.2898	0.0006975	540.7874930664337	53.534	0.52525	53.557	53.256	53.781	0.022537	-0.00089517	-0.00055894	NaN	76.17	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79226			34530	8585	22830	22840							0.024525376093379236
LSDKNIEQY	9	Unmodified	_LSDKNIEQY_					0	0	0		nc|ENSG00000122068|Q96QD9-3|FYTTD1;nc|ENSG00000122068|Q96QD9-2|FYTTD1;ENSG00000122068|ENST00000241502|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.275634765625	2	555.277303	1108.54005	-0.45643	-0.00025344	-0.58538	-0.00032505	-1.0418	-0.00057849	555.2767135687351	41.67	0.44784	41.639	41.421	41.868	-0.030991					26	10	3	0	0	0	0.07589	1	3056	3056		98.629	10.933	1	427350			34531	3209	22831	22841	39432	39432					-0.009874724901919762
LSDKNIEQY	9	Unmodified	_LSDKNIEQY_					0	0	0		nc|ENSG00000122068|Q96QD9-3|FYTTD1;nc|ENSG00000122068|Q96QD9-2|FYTTD1;ENSG00000122068|ENST00000241502|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.2760009765625	2	555.277303	1108.54005	-0.68342	-0.00037949	-0.6436	-0.00035738	-1.327	-0.00073686	555.2767815644133	41.604	0.56843	41.563	41.365	41.934	-0.040806					26	13	3	0	0	0	0.12688	3	3140	3129;3140;3153		87.696	12.613	1	461080			34532	3209	22831	22841	39433;39434;39435	39434					-0.009874724901919762
LSDKNIEQY	9	Unmodified	_LSDKNIEQY_					0	0	0		nc|ENSG00000122068|Q96QD9-3|FYTTD1;nc|ENSG00000122068|Q96QD9-2|FYTTD1;ENSG00000122068|ENST00000241502|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.2762451171875	2	555.277303	1108.54005	-0.56308	-0.00031267	-0.89921	-0.00049931	-1.4623	-0.00081198	555.2765831289998	41.604	0.61522	41.608	41.378	41.993	0.0034142					28	14	3	0	0	0	2.7574E-05	3	3079	3069;3079;3093		153.04	30.86	1	445690			34533	3209	22831	22841	39436;39437;39438	39437					-0.009874724901919762
LSDKNIEQY	9	Unmodified	_LSDKNIEQY_					0	0	0		nc|ENSG00000122068|Q96QD9-3|FYTTD1;nc|ENSG00000122068|Q96QD9-2|FYTTD1;ENSG00000122068|ENST00000241502|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	555.277303	1108.54005	0.21028	0.00011676	-1.667	-0.00092565	-1.4567	-0.00080889	555.2766378281174	41.683	0.44133	41.687	41.425	41.866	0.0043983	0.063035	-0.00098301	NaN	153.04	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121760			34534	3209	22831	22841							-0.009874724901919762
LSDLPGFLG	9	Unmodified	_LSDLPGFLG_					0	0	0		nc|ENSG00000165699|Q92574-2|TSC1;ENSG00000165699|ENST00000298552|TSC1	nc|ENSG00000165699|Q92574-2|TSC1	nc|ENSG00000165699|Q92574-2|TSC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	459.74822998046875	2	459.750193	917.485833	-0.49337	-0.00022683	-3.659	-0.0016822	-4.1523	-0.001909	459.7483445392968	26.213	0.75562	25.956	25.594	26.35	-0.2572					26	16	2	0	0	0	0.43338	1	1411	1411		55.504	2.1528	1	161830			34535	6116	22832	22842	39439	39439					0.02378980148921528
LSDSGVTQRY	10	Unmodified	_LSDSGVTQRY_					0	0	0		ENST00000555656.5_1_14:20915401-20917107:-|nuORF;ENSG00000092094|ENST00000206542|OSGEP	ENST00000555656.5_1_14:20915401-20917107:-|nuORF	ENST00000555656.5_1_14:20915401-20917107:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.281005859375	2	563.280377	1124.5462	-1.1312	-0.00063716	1.0036	0.00056529	-0.12758	-7.1861E-05	563.2807362382775	37.631	0.51399	37.607	37.35	37.864	-0.023979					22	11	3	0	0	0	0.69342	1	2503	2503		45.022	6.2686	1	100060			34536	1691	22833	22843	39440	39440					-0.011089542586660173
LSDSGVTQRY	10	Unmodified	_LSDSGVTQRY_					0	0	0		ENST00000555656.5_1_14:20915401-20917107:-|nuORF;ENSG00000092094|ENST00000206542|OSGEP	ENST00000555656.5_1_14:20915401-20917107:-|nuORF	ENST00000555656.5_1_14:20915401-20917107:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.2799072265625	2	563.280377	1124.5462	-0.71465	-0.00040255	0.95378	0.00053725	0.23913	0.0001347	563.2809300756119	37.568	0.53276	37.518	37.273	37.806	-0.050369					20	11	2	0	0	0	0.3872	1	2582	2582		65.157	12.068	1	112650			34537	1691	22833	22843	39441	39441					-0.011089542586660173
LSDSGVTQRY	10	Unmodified	_LSDSGVTQRY_					0	0	0		ENST00000555656.5_1_14:20915401-20917107:-|nuORF;ENSG00000092094|ENST00000206542|OSGEP	ENST00000555656.5_1_14:20915401-20917107:-|nuORF	ENST00000555656.5_1_14:20915401-20917107:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.2786865234375	2	563.280377	1124.5462	-0.81811	-0.00046083	0.74423	0.00041921	-0.073883	-4.1617E-05	563.2807794137526	37.475	0.52795	37.487	37.24	37.768	0.011173					20	11	2	0	0	0	0.73395	1	2506	2506		42.864	1.4377	1	132990			34538	1691	22833	22843	39442	39442					-0.011089542586660173
LSDVLGRKTT	10	Unmodified	_LSDVLGRKTT_					0	0	0		chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3165893554688	2	545.316763	1088.61897	1.9901	0.0010853	-2.103	-0.0011468	-0.1129	-6.1566E-05	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.8545	1	9276	9276		36.447	0.82846	1	4704900			34539	335	22834	22844	39443	39443					0.07820799534783873
LSDVLGRKTT	10	Unmodified	_LSDVLGRKTT_					0	0	0		chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.31689453125	2	545.316763	1088.61897	0.15103	8.2357E-05	-0.42604	-0.00023233	-0.27501	-0.00014997	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.8545	1	8688	8688		36.447	4.4919	1	5755000			34540	335	22834	22844	39444	39444					0.07820799534783873
LSDVLGRKTT	10	Unmodified	_LSDVLGRKTT_					0	0	0		chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3165893554688	2	545.316763	1088.61897	0.15577	8.4944E-05	-0.048112	-2.6236E-05	0.10766	5.8708E-05	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.86272	1	9010	9010		24.519	0	1	17220000			34541	335	22834	22844	39445	39445					0.07820799534783873
LSDWSIPGRVF	11	Unmodified	_LSDWSIPGRVF_					0	0	0		ENST00000531236.1_1_11:71192901-71193895:+|nuORF	ENST00000531236.1_1_11:71192901-71193895:+|nuORF	ENST00000531236.1_1_11:71192901-71193895:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	638.8348388671875	2	638.837862	1275.66117	0.70347	0.0004494	-4.1848	-0.0026734	-3.4813	-0.002224	638.8348170860995	74.695	1.1442	74.827	74.537	75.682	0.13208					77	32	4	0	0	0	0.41466	1	6933	6933		58.23	7.0372	1	682170			34542	13354	22835	22845	39446	39446					0.034367749431112316
LSDYKIKLIFN	11	Unmodified	_LSDYKIKLIFN_					0	0	0		ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-4|SVEP1;ENST00000467821.1_1_9:113205816-113312285:-|nuORF	ENSG00000165124|ENST00000374469|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.93292236328125	3	451.930739	1352.77039	2.5866	0.001169	1.6869	0.00076237	4.2735	0.0019313	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.75779	1	10855	10855		20.315	1.784	1	1152500			34543	6050	22836	22846	39447	39447					0.1081136084260379
LSEATTAMGY	10	Oxidation (M)	_LSEATTAM(Oxidation (M))GY_		LSEATTAM(1)GY		LSEATTAM(44)GY	0	0	1		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.235595703125	2	530.23679	1058.45903	-0.036057	-1.9119E-05	-3.1029	-0.0016453	-3.139	-0.0016644	530.2349031045943	69.333	0.41327	69.359	69.226	69.639	0.02636					35	22	2	0	0	0	0.71042	1	6557	6557		44.117	9.9443	1	163600			34544	7373	22837	22847	39448	39448		125			-0.06786496524591712
LSEFIEKFG	9	Unmodified	_LSEFIEKFG_					0	0	0			REV__ENSG00000213512|ENST00000294671|GBP7	REV__ENSG00000213512|ENST00000294671|GBP7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	534.294189453125	2	535.281857	1068.54916	0.72656	0.00038892	-1.2209	-0.00065351	-0.49432	-0.0002646	535.2807027999135	88.62	1.5398	88.771	87.985	89.525	0.15055					61	36	2	0	0	0	0.20789	1	8807	8807		37.159	6.6555	1	104980	+		34545	23620	22838	22848	39449	39449					0.017629208661446683
LSEGDKKPDL	10	Unmodified	_LSEGDKKPDL_					0	0	0			REV__nc|ENSG00000036549|Q8IYH5-3|ZZZ3	REV__nc|ENSG00000036549|Q8IYH5-3|ZZZ3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.75390625	2	551.292953	1100.57135	-0.76489	-0.00042168	0.96891	0.00053415	0.20402	0.00011247	551.7947648293992	52.077	0.5313	52.501	52.234	52.765	0.42348					21	12	2	0	0	0	0.37624	1	5181	5181		45.972	7.1661	1	541800	+		34546	16293	22839	22849	39450	39450					0.025091005438980574
LSEGVVPVLL	10	Unmodified	_LSEGVVPVLL_					0	0	0		ENST00000418747.2_1_9:130877356-130879998:-|nuORF	ENST00000418747.2_1_9:130877356-130879998:-|nuORF	ENST00000418747.2_1_9:130877356-130879998:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.316650390625	2	513.3157	1024.61685	-1.5202	-0.00078036	3.031	0.0015559	1.5108	0.00077549	513.3171098240366	43.168	1.3566	43.168	42.754	44.111	0					83	32	4	0	0	0	0.86589	1	3031	3031		29.15	0	1	698430			34547	11429	22840	22850	39451	39451					0.10552370796949617
LSEKGSSKKLA	11	Unmodified	_LSEKGSSKKLA_					0	0	0		ENSG00000143512|ENST00000343410|HHIPL2	ENSG00000143512|ENST00000343410|HHIPL2	ENSG00000143512|ENST00000343410|HHIPL2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.333251953125	2	574.337695	1146.66084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.267	1	33.267	32.767	33.767	0								0	0	0	0.56276	1	1700	1700		22.58	1.6327	1				34548	4639	22841	22851	39452	39452					0.09337355223283339
LSEKIQAKP	9	Unmodified	_LSEKIQAKP_					0	0	0			REV__ENSG00000188389|ENST00000334409|PDCD1	REV__ENSG00000188389|ENST00000334409|PDCD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3023986816406	2	507.303124	1012.5917	0.70204	0.00035615	-0.56168	-0.00028494	0.14036	7.1203E-05	507.30265368640494	70.731	1.0611	71.278	70.803	71.864	0.54756					49	25	3	0	0	0	0.07589	1	7881	7881		98.629	2.8142	1	642600	+		34549	22999	22842	22852	39453	39453					0.08590315994376851
LSEKNAIYDP	10	Unmodified	_LSEKNAIYDP_					0	0	0			REV__ENSG00000144524|ENST00000350033|COPS7B	REV__ENSG00000144524|ENST00000350033|COPS7B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2908935546875	2	575.292953	1148.57135	-0.38737	-0.00022285	-0.71135	-0.00040923	-1.0987	-0.00063208	575.2938552163392	76.272	2.3519	76.672	75.494	77.846	0.3997					143	62	4	0	0	0	0.54701	1	8592	8592		52.937	8.8199	1	1387300	+		34550	19896	22843	22853	39454	39454					0.003011005439020664
LSELRCEMEAQ	11	Unmodified	_LSELRCEMEAQ_					0	0	0		nc|ENSG00000171346|P19012-2|KRT15;ENST00000474031.5_1_17:39671722-39674667:-|nuORF;ENSG00000171346|ENST00000254043|KRT15;CON__P19012;CON__A2A4G1	nc|ENSG00000171346|P19012-2|KRT15	nc|ENSG00000171346|P19012-2|KRT15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.8687438964844	3	436.868934	1307.58497	1.1772	0.00051427	-1.2692	-0.00055448	-0.092035	-4.0207E-05	436.8684227581306	32.965	0.63138	33.177	32.935	33.566	0.21168					33	14	3	0	0	0	0.71394	1	2366	2366		29.245	1.6011	1	273600		+	34551	559	22844	22854	39455	39455					-0.056517330108135866
LSELRCEMEAQ	11	Unmodified	_LSELRCEMEAQ_					0	0	0		nc|ENSG00000171346|P19012-2|KRT15;ENST00000474031.5_1_17:39671722-39674667:-|nuORF;ENSG00000171346|ENST00000254043|KRT15;CON__P19012;CON__A2A4G1	nc|ENSG00000171346|P19012-2|KRT15	nc|ENSG00000171346|P19012-2|KRT15	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	436.868934	1307.58497	0.035146	1.5354E-05	-0.207	-9.0433E-05	-0.17186	-7.5079E-05	436.86895853510435	33.01	0.67662	33.179	32.892	33.568	0.16971	0.0014658	0.00089598	NaN	29.245	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	339050		+	34552	559	22844	22854							-0.056517330108135866
LSENQLQKI	9	Unmodified	_LSENQLQKI_					0	0	0		ENSG00000240720|ENST00000458448|LRRD1	ENSG00000240720|ENST00000458448|LRRD1	ENSG00000240720|ENST00000458448|LRRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	536.8031005859375	2	536.803488	1071.59242	0.85568	0.00045933	-1.1229	-0.00060277	-0.26722	-0.00014344	536.8027987899134	26.493	1.7699	26.461	25.952	27.722	-0.032125					84	42	4	0	0	0	0.29259	1	1154	1154		65.465	1.2581	1	712220			34553	8783	22845	22855	39456	39456					0.05949110643427957
LSEPEVLLQ	9	Unmodified	_LSEPEVLLQ_					0	0	0		ENSG00000100335|ENST00000325301|MIEF1	ENSG00000100335|ENST00000325301|MIEF1	ENSG00000100335|ENST00000325301|MIEF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.2869873046875	2	514.28714	1026.55973	0.65671	0.00033774	-0.78168	-0.00040201	-0.12497	-6.4273E-05	514.2865472564384	81.168	0.93392	81.108	80.71	81.644	-0.059692					46	21	3	0	0	0	0.47272	1	8204	8204		53.351	0	1	381200			34554	1826	22846	22856	39457	39457					0.04750903520562133
LSEQIWEL	8	Unmodified	_LSEQIWEL_					0	0	0		ENST00000216407.4_1_12:68867655-68868498:+|nuORF	ENST00000216407.4_1_12:68867655-68868498:+|nuORF	ENST00000216407.4_1_12:68867655-68868498:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.26788330078125	2	509.266207	1016.51786	1.0642	0.00054197	2.6823	0.001366	3.7465	0.001908	509.2673089060536	55.749	0.84582	56.309	55.857	56.703	0.55953					49	21	3	0	0	0	0.16379	1	5726	5726		110.12	3.4368	1	3176800			34555	9135	22847	22857	39458	39458					0.010263478320325703
LSEQSMLPL	9	Unmodified	_LSEQSMLPL_					0	0	0			REV__nc|ENSG00000179698|A6NE52-2|WDR97	REV__nc|ENSG00000179698|A6NE52-2|WDR97	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2681579589844	2	509.267893	1016.52123	1.0642	0.00054197	-0.62721	-0.00031942	0.437	0.00022255	509.2673089060536	55.749	0.84582	56.309	55.857	56.703	0.55953					49	21	3	0	0	0	0.065196	1	5777	5777		101.6	0	1	3176800	+		34556	22350	22848	22858	39459	39459					0.013632746144139674
LSERYAELY	9	Unmodified	_LSERYAELY_					0	0	0		nc|ENSG00000188483|Q5T953-2|IER5L;ENSG00000188483|ENST00000372491|IER5L	nc|ENSG00000188483|Q5T953-2|IER5L	nc|ENSG00000188483|Q5T953-2|IER5L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.2894287109375	2	572.287671	1142.56079	0.31338	0.00017934	-0.52239	-0.00029896	-0.20901	-0.00011962	572.2871473620589	53.89	0.62375	53.913	53.617	54.241	0.022537					31	15	3	0	0	0	0.39367	1	4776	4776		58.23	0.41864	1	188510			34557	7931	22849	22859	39460	39460					-0.004788821105421448
LSESIDWGIL	10	Unmodified	_LSESIDWGIL_					0	0	0		ENST00000437852.2_1_9:116612983-116613133:-|nuORF	ENST00000437852.2_1_9:116612983-116613133:-|nuORF	ENST00000437852.2_1_9:116612983-116613133:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.7974853515625	2	566.797872	1131.58119	0.066586	3.7741E-05	0.00038101	2.1595E-07	0.066967	3.7957E-05	566.797766000371	79.428	1.3577	79.844	79.274	80.632	0.41621					64	31	4	0	0	0	0.85934	1	9113	9113		35.618	0.46626	1	590540			34558	11742	22850	22860	39461	39461					0.020662885492811256
LSETLLKDL	9	Unmodified	_LSETLLKDL_					0	0	0			REV__ENSG00000155629|ENST00000339364|PIK3AP1	REV__ENSG00000155629|ENST00000339364|PIK3AP1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3068237304688	2	516.30279	1030.59103	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.534	1	62.534	62.034	63.034	0								0	0	0	0.32758	1	5466	5466		20.947	0.4651	1		+		34559	20435	22851	22861	39462	39462					0.07695476554658853
LSEVNRTGTQY	11	Unmodified	_LSEVNRTGTQY_					0	0	0		nc|ENSG00000166401|P50452-2|SERPINB8;ENSG00000166401|ENST00000397985|SERPINB8	nc|ENSG00000166401|P50452-2|SERPINB8	nc|ENSG00000166401|P50452-2|SERPINB8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3189697265625	2	634.317491	1266.62043	-0.077428	-4.9114E-05	-0.0043829	-2.7801E-06	-0.081811	-5.1894E-05	634.317301101767	36.174	0.5905	36.155	35.83	36.42	-0.018673					27	12	4	0	0	0	0.47591	1	2303	2303		53.597	22.067	1	118260			34560	6191	22852	22862	39463	39463					-0.0022161116712595685
LSEVNRTGTQY	11	Unmodified	_LSEVNRTGTQY_					0	0	0		nc|ENSG00000166401|P50452-2|SERPINB8;ENSG00000166401|ENST00000397985|SERPINB8	nc|ENSG00000166401|P50452-2|SERPINB8	nc|ENSG00000166401|P50452-2|SERPINB8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.3179931640625	2	634.317491	1266.62043	-0.76595	-0.00048586	0.79578	0.00050478	0.029829	1.8921E-05	634.3178312417547	36.137	0.49937	36.081	35.879	36.379	-0.055904					25	10	3	0	0	0	0.1264	2	2390	2390;2401		86.882	39.224	1	121410			34561	6191	22852	22862	39464;39465	39464					-0.0022161116712595685
LSEVNRTGTQY	11	Unmodified	_LSEVNRTGTQY_					0	0	0		nc|ENSG00000166401|P50452-2|SERPINB8;ENSG00000166401|ENST00000397985|SERPINB8	nc|ENSG00000166401|P50452-2|SERPINB8	nc|ENSG00000166401|P50452-2|SERPINB8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3171997070312	2	634.317491	1266.62043	-0.60033	-0.0003808	0.31759	0.00020145	-0.28274	-0.00017935	634.3176200339718	36.087	0.54506	36.096	35.889	36.434	0.0092773					20	11	2	0	0	0	0.11377	2	2325	2314;2325		90.149	33.715	1	159350			34562	6191	22852	22862	39466;39467	39467					-0.0022161116712595685
LSEYDAEYS	9	Unmodified	_LSEYDAEYS_					0	0	0		ENST00000535399.1_1_12:132195753-132198841:+|nuORF;ENSG00000061936|ENST00000261674|SFSWAP;nc|ENSG00000061936|Q12872-2|SFSWAP	ENST00000535399.1_1_12:132195753-132198841:+|nuORF	ENST00000535399.1_1_12:132195753-132198841:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.7255859375	2	538.724569	1075.43459	-0.98524	-0.00053077	1.2276	0.00066136	0.2424	0.00013059	538.7250438414814	71.432	0.62085	71.817	71.503	72.124	0.38449					33	14	3	0	0	0	0.62081	1	7976	7976		45.952	1.8352	1	588160			34563	1078	22853	22863	39468	39468					-0.1001143340647559
LSFAKKRKSNS	11	Unmodified	_LSFAKKRKSNS_					0	0	0			REV__ENSG00000157502|ENST00000357175|PWWP3B	REV__ENSG00000157502|ENST00000357175|PWWP3B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3693237304688	2	633.369861	1264.72517	1.5976	0.0010119	-2.7562	-0.0017457	-1.1585	-0.00073377	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.69687	1	11646	11646		16.717	0	1	10012000	+		34564	20547	22854	22864	39469	39469					0.10339555100085818
LSFASVVPAV	10	Unmodified	_LSFASVVPAV_					0	0	0			REV__ENSG00000168229|ENST00000306051|PTGDR	REV__ENSG00000168229|ENST00000306051|PTGDR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	495.7901611328125	2	495.286943	988.559333	0.50869	0.00025195	-1.5106	-0.0007482	-1.002	-0.00049625	495.28593815824195	68.677	0.4753	68.805	68.592	69.067	0.12838					28	17	2	0	0	0	0.8608	1	6182	6182		34.173	1.3601	1	120640	+		34565	21470	22855	22865	39470	39470					0.0645952859136969
LSFDEPSAGH	10	Unmodified	_LSFDEPSAGH_					0	0	0			REV__nc|ENSG00000019144|Q86UU1-3|PHLDB1	REV__nc|ENSG00000019144|Q86UU1-3|PHLDB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2410888671875	2	530.240721	1058.46689	-0.033627	-1.783E-05	0.58581	0.00031062	0.55219	0.00029279	530.240968765566	111.53	2.3024	111.47	110.12	112.42	-0.059937					158	81	3	0	0	0	0.86589	1	12137	12137		29.15	0	1	182550	+		34566	16227	22856	22866	39471	39471					-0.06000601212804213
LSFGAIYLNR	10	Unmodified	_LSFGAIYLNR_					0	0	0			REV__ENSG00000185825|ENST00000345046|BCAP31	REV__ENSG00000185825|ENST00000345046|BCAP31	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.3692016601562	2	577.321848	1152.62914	-0.99631	-0.00057519	-3.6325	-0.0020971	-4.6288	-0.0026723	577.3192390402041	42.324	0.69174	42.327	41.993	42.685	0.0034142					23	16	3	0	0	0	0.37624	1	3200	3200		19.997	0	1	66410	+		34567	22799	22857	22867	39472	39472					0.058934072599640785
LSFHGANVLTP	11	Unmodified	_LSFHGANVLTP_					0	0	0			REV__nc|ENSG00000204852|Q2MV58-5|TCTN1;REV__nc|ENSG00000204852|Q2MV58-6|TCTN1	REV__nc|ENSG00000204852|Q2MV58-5|TCTN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	578.3106079101562	2	578.31148	1154.60841	0.63739	0.00036861	-2.4387	-0.0014103	-1.8013	-0.0010417	578.3098719113019	110.31	1.8374	110.34	110.1	111.94	0.031738					174	64	3	0	0	0	0.69995	1	12084	12084		31.53	0	1	3242500	+		34568	23524;30164	22858	22868	39473	39473					0.037288168803115695
LSFLHRLP	8	Unmodified	_LSFLHRLP_					0	0	0		ENST00000573295.5_1_17:79211175-79212833:-|nuORF;nc|ENSG00000167302|Q96N21|TEPSIN;ENSG00000167302|ENST00000637944|TEPSIN	ENST00000573295.5_1_17:79211175-79212833:-|nuORF	ENST00000573295.5_1_17:79211175-79212833:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7957763671875	2	491.795269	981.575986	-0.05486	-2.698E-05	0.17817	8.7624E-05	0.12331	6.0644E-05	491.79521966656876	43.339	1.2355	43.289	42.859	44.095	-0.050308					43	29	2	0	0	0	0.87064	1	2969	2969		29.15	0.89528	1	209020			34569	6285	22859	22869	39474	39474					0.08446074267976655
LSFNYLLF	8	Unmodified	_LSFNYLLF_					0	0	0		ENST00000306442.4_1_5:122359405-122359573:-|nuORF	ENST00000306442.4_1_5:122359405-122359573:-|nuORF	ENST00000306442.4_1_5:122359405-122359573:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.7822570800781	2	508.776211	1015.53787	0.88379	0.00044965	-1.6074	-0.0008178	-0.7236	-0.00036815	508.7752763234615	48.745	0.59908	49.65	49.33	49.929	0.90424					35	14	3	0	0	0	0.4196	1	4712	4712		38.806	0	1	440030			34570	9861	22860	22870	39475	39475					0.03072143562656038
LSFPHLRI	8	Unmodified	_LSFPHLRI_					0	0	0		ENST00000581241.5_1_17:80202659-80203935:-|nuORF	ENST00000581241.5_1_17:80202659-80203935:-|nuORF	ENST00000581241.5_1_17:80202659-80203935:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79937744140625	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.938	1	64.061	63.561	64.561	0.12353								0	0	0	0.29245	1	5621	5621		30.504	0	1				34571	14104	22861	22871	39476	39476					0.08446074267976655
LSFPLIHR	8	Unmodified	_LSFPLIHR_					0	0	0		ENST00000507727.2_1_1:95449147-95492738:-|nuORF;ENSG00000172339|ENST00000370205|ALG14	ENST00000507727.2_1_1:95449147-95492738:-|nuORF	ENST00000507727.2_1_1:95449147-95492738:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7950439453125	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.7961	1	4545	4545		17.365	0	1	2075300			34572	6762	22862	22872	39477	39477					0.08446074267988024
LSFQCCITV	9	2 Carbamidomethyl (C)	_LSFQC(Carbamidomethyl (C))C(Carbamidomethyl (C))ITV_	LSFQC(1)C(1)ITV		LSFQC(100)C(100)ITV		0	2	0		ENST00000523945.1_1_8:94753536-94753683:+|nuORF	ENST00000523945.1_1_8:94753536-94753683:+|nuORF	ENST00000523945.1_1_8:94753536-94753683:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.2653198242188	2	564.264827	1126.5151	0.91113	0.00051412	-1.2533	-0.00070722	-0.34221	-0.00019309	564.2640197530781	55.961	0.73518	56.521	56.23	56.965	0.55953					32	18	2	0	0	0	0.065196	2	5779	5779;5784		101.6	8.4575	1	2405800			34573	13206	22863	22873	39478;39479	39478	177;178				-0.04309566888787231
LSGFLLENTI	10	Unmodified	_LSGFLLENTI_					0	0	0		ENSG00000213901|ENST00000409878|SLC23A3;nc|ENSG00000213901|Q6PIS1-5|SLC23A3;nc|ENSG00000213901|Q6PIS1-2|SLC23A3	ENSG00000213901|ENST00000409878|SLC23A3	ENSG00000213901|ENST00000409878|SLC23A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8060302734375	2	553.808239	1105.60193	-0.66564	-0.00036864	0.62911	0.00034841	-0.036522	-2.0226E-05	553.8083797428066	33.72	0.74817	33.723	33.39	34.138	0.0030785					48	17	4	0	0	0	0.86471	1	1953	1953		30.318	0	1	326730			34574	8605	22864	22874	39480	39480					0.05334878928965736
LSGFSDTFKQ	10	Unmodified	_LSGFSDTFKQ_					0	0	0			REV__ENST00000441109.6_1_7:80276056-80285961:+|nuORF	REV__ENST00000441109.6_1_7:80276056-80285961:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.2836303710938	2	565.279846	1128.54514	0.39491	0.00022324	-2.1791	-0.0012318	-1.7842	-0.0010086	565.2812510764642	75.988	0.95297	76.383	75.994	76.947	0.39507					77	22	6	0	0	0	0.57924	1	8612	8612		51.193	9.7661	1	606990	+		34575	26749	22865	22875	39481	39481					-0.013991686275630855
LSGGCLEVLKN	11	Unmodified	_LSGGCLEVLKN_					0	0	0		ENST00000374864.8_3_20:33077078-33077186:+|nuORF	ENST00000374864.8_3_20:33077078-33077186:+|nuORF	ENST00000374864.8_3_20:33077078-33077186:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.80517578125	2	566.805174	1131.59579	-0.52899	-0.00029983	0.92267	0.00052297	0.39368	0.00022314	566.8055131198089	62.726	2.3736	63.113	62.36	64.733	0.38779					117	54	3	0	0	0	0.51007	1	6696	6696		51.193	1.7511	1	633890			34576	10788	22866	22876	39482	39482					0.03526037425785944
LSGGQKAR	8	Unmodified	_LSGGQKAR_					0	0	0		nc|ENSG00000204574|Q8NE71-2|ABCF1;ENSG00000204574|ENST00000326195|ABCF1;nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4	nc|ENSG00000204574|Q8NE71-2|ABCF1;nc|ENSG00000125257|O15439-2|ABCC4	nc|ENSG00000125257|O15439-2|ABCC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7390441894531	2	408.737951	815.46135	-0.071529	-2.9237E-05	4.315	0.0017637	4.2434	0.0017344	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.84341	1	2048	2048		24.203	3.2558	1	1654100			34577	3378;8461	22867	22877	39483	39483					0.04623764786038009
LSGGSTLKL	9	Unmodified	_LSGGSTLKL_					0	0	0		ENST00000475607.1_1_9:125795982-125827833:+|nuORF;nc|ENSG00000188394|Q9Y3P9-2|RABGAP1	ENST00000475607.1_1_9:125795982-125827833:+|nuORF	ENST00000475607.1_1_9:125795982-125827833:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2646484375	2	438.263468	874.512382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.132	1	46.113	45.613	46.613	-0.018585								0	0	0	0.30416	1	3681	3681		29.15	1.2673	1				34578	12326	22868	22878	39484	39484					0.07010669040232642
LSGGSTLKL	9	Unmodified	_LSGGSTLKL_					0	0	0		ENST00000475607.1_1_9:125795982-125827833:+|nuORF;nc|ENSG00000188394|Q9Y3P9-2|RABGAP1	ENST00000475607.1_1_9:125795982-125827833:+|nuORF	ENST00000475607.1_1_9:125795982-125827833:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2630920410156	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.7932	1	3047	3047		21.96	1.013	1	22029000			34579	12326	22868	22878	39485	39485					0.07010669040232642
LSGHLTSSK	9	Unmodified	_LSGHLTSSK_					0	0	0			REV__ENST00000447577.5_1_1:93730252-93805219:-|nuORF	REV__ENST00000447577.5_1_1:93730252-93805219:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.2559509277344	2	465.256174	928.497795	-0.23044	-0.00010722	0.42849	0.00019936	0.19805	9.2143E-05	465.2561051188786	25.962	1.0624	25.704	25.424	26.486	-0.2572					62	23	5	0	0	0	0.55097	1	1367	1367		49.442	1.7842	1	1300900	+		34580	26821	22869	22879	39486	39486					0.030685968920806772
LSGIGFLKNL	10	Unmodified	_LSGIGFLKNL_					0	0	0		ENST00000461745.5_2_3:77089843-77089924:+|nuORF	ENST00000461745.5_2_3:77089843-77089924:+|nuORF	ENST00000461745.5_2_3:77089843-77089924:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.3189086914062	2	531.321317	1060.62808	-0.033063	-1.7567E-05	-3.6466	-0.0019375	-3.6797	-0.0019551	531.3191547732448	95.172	2.5483	95.24	94.714	97.262	0.068336					181	59	5	0	0	0	0.86218	1	9957	9957		32.812	1.2826	1	3878900			34581	12030	22870	22880	39487	39487					0.10019192891104467
LSGKPSGLF	9	Unmodified	_LSGKPSGLF_					0	0	0		ENST00000193391.7_1_3:101023078-101023144:-|nuORF	ENST00000193391.7_1_3:101023078-101023144:-|nuORF	ENST00000193391.7_1_3:101023078-101023144:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.2586975097656	2	453.258185	904.501818	-1.4841	-0.00067267	0.98693	0.00044734	-0.49714	-0.00022533	453.2583618788476	46.319	0.48469	46.791	46.536	47.021	0.47139					25	11	3	0	0	0	0.35373	1	4365	4365		60.972	3.1607	1	1651800			34582	9091	22871	22881	39488	39488					0.04574686385808491
LSGKRVQNS	9	Unmodified	_LSGKRVQNS_					0	0	0			REV__nc|ENSG00000145757|Q9BWV2-2|SPATA9	REV__nc|ENSG00000145757|Q9BWV2-2|SPATA9	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.780029296875	2	494.780348	987.546142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.334	1	84.482	83.982	84.982	0.14793								0	0	0	0.31437	1	8207	8207		25.574	4.6271	1		+		34583	29913	22872	22882	39489	39489					0.05187090532001548
LSGKVKPGELN	11	Unmodified	_LSGKVKPGELN_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.3311157226562	2	571.332413	1140.65027	0.87236	0.00049841	-3.3864	-0.0019347	-2.514	-0.0014363	571.3304741505596	102.17	3.4204	102.3	101.59	105.01	0.13523					157	84	4	0	0	0	0.72106	1	10777	10777		28.081	4.5588	1	3995900	+		34584	18623	22873	22883	39490	39490					0.08557372568884603
LSGKVKPGELN	11	Unmodified	_LSGKVKPGELN_					0	0	0			REV__ENSG00000124942|ENST00000378024|AHNAK	REV__ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.3318481445312	2	571.332413	1140.65027	-1.3827	-0.00078998	-1.153	-0.00065874	-2.5357	-0.0014487	571.3317717910289	102.19	3.5699	102.32	101.59	105.16	0.1357					156	88	4	0	0	0	0.69248	1	10767	10767		32.751	2.4328	1	3715400	+		34585	18623	22873	22883	39491	39491					0.08557372568884603
LSGLAQAHLAS	11	Unmodified	_LSGLAQAHLAS_					0	0	0			REV__nc|ENSG00000020181|Q96PE1-2|ADGRA2	REV__nc|ENSG00000020181|Q96PE1-2|ADGRA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.2945556640625	2	534.29583	1066.57711	-0.74259	-0.00039676	-1.2826	-0.00068527	-2.0252	-0.001082	534.2951504671357	88.691	3.5877	88.691	87.598	91.185	0					140	83	2	0	0	0	0.53361	1	8494	8494		49.536	0	1	382360	+		34586	16234	22874	22884	39492	39492					0.04648243846213518
LSGLFLINVN	10	Unmodified	_LSGLFLINVN_					0	0	0			REV__ENST00000467067.1_1_1:8074863-8075025:-|nuORF	REV__ENST00000467067.1_1_1:8074863-8075025:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.317626953125	2	545.318774	1088.623	-0.68757	-0.00037494	-3.0506	-0.0016636	-3.7382	-0.0020385	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.82886	1	8426	8426		37.812	4.9991	1	3608000	+		34587	27144	22875	22885	39493	39493					0.08222889028479585
LSGLFLINVN	10	Unmodified	_LSGLFLINVN_					0	0	0			REV__ENST00000467067.1_1_1:8074863-8075025:-|nuORF	REV__ENST00000467067.1_1_1:8074863-8075025:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3160400390625	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.73395	1	10274	10274		42.864	5.0528	1	4868200	+		34588	27144	22875	22885	39494	39494					0.08222889028479585
LSGLKKTS	8	Unmodified	_LSGLKKTS_					0	0	0		ENST00000367800.8_1_6:135788741-135811786:-|nuORF	ENST00000367800.8_1_6:135788741-135811786:-|nuORF	ENST00000367800.8_1_6:135788741-135811786:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2590026855469	2	417.258185	832.501818	-0.38397	-0.00016022	1.2525	0.00052261	0.86852	0.0003624	417.2585749889359	22.175	2.752	22.117	21.499	24.251	-0.05867					139	87	2	0	0	0	0.86677	1	728	728		27.882	5.9224	1	87379			34589	10570	22876	22886	39495	39495					0.07886686385802477
LSGLRRKPKQL	11	Unmodified	_LSGLRRKPKQL_					0	0	0		nc|ENSG00000163617|Q8NCU4-2|CCDC191;ENST00000460813.5_1_3:113723412-113755878:-|nuORF;ENSG00000163617|ENST00000295878|CCDC191	nc|ENSG00000163617|Q8NCU4-2|CCDC191	nc|ENSG00000163617|Q8NCU4-2|CCDC191	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3923950195312	2	648.417146	1294.81974	-0.0023379	-1.5159E-06	-3.5544	-0.0023048	-3.5568	-0.0023063	648.4145767312635	106.53	0.60004	106.5	106.14	106.74	-0.025146					16	13	2	0	0	0	0.17275	1	11553	11553		27.047	1.4733	1	95473			34590	5836	22877	22887	39496	39496					0.1841211364207993
LSGLRRKPKQL	11	Unmodified	_LSGLRRKPKQL_					0	0	0		nc|ENSG00000163617|Q8NCU4-2|CCDC191;ENST00000460813.5_1_3:113723412-113755878:-|nuORF;ENSG00000163617|ENST00000295878|CCDC191	nc|ENSG00000163617|Q8NCU4-2|CCDC191	nc|ENSG00000163617|Q8NCU4-2|CCDC191	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3927612304688	2	648.417146	1294.81974	-0.0023385	-1.5163E-06	-1.7794	-0.0011538	-1.7818	-0.0011553	648.9181267345674	107.38	0.62036	107.35	107.12	107.75	-0.034409					20	14	3	0	0	0	0.17295	1	11673	11673		22.58	9.1256	1	242030			34591	5836	22877	22887	39497	39497					0.1841211364207993
LSGNFRGVD	9	Unmodified	_LSGNFRGVD_					0	0	0			REV__ENSG00000169962|ENST00000339381|TAS1R3	REV__ENSG00000169962|ENST00000339381|TAS1R3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.7455139160156	2	482.745973	963.477394	-0.019338	-9.3353E-06	-0.12031	-5.8078E-05	-0.13965	-6.7413E-05	482.7457535001424	31.583	0.63912	31.69	31.42	32.059	0.10707					33	14	4	0	0	0	0.64922	1	2163	2163		44.117	1.2525	1	590840	+		34592	21620	22878	22888	39498	39498					-0.005805737677064826
LSGNFRGVD	9	Unmodified	_LSGNFRGVD_					0	0	0			REV__ENSG00000169962|ENST00000339381|TAS1R3	REV__ENSG00000169962|ENST00000339381|TAS1R3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	482.745973	963.477394	-0.22871	-0.00011041	0.4304	0.00020777	0.20169	9.7363E-05	482.7459308332199	31.619	0.85792	31.699	31.384	32.242	0.079836	0.0041363	0.000162	NaN	44.117	36	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	490900	+		34593	21620	22878	22888							-0.005805737677064826
LSGNFRGVD	9	Unmodified	_LSGNFRGVD_					0	0	0			REV__ENSG00000169962|ENST00000339381|TAS1R3	REV__ENSG00000169962|ENST00000339381|TAS1R3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	482.745973	963.477394	-0.019338	-9.3353E-06	-0.12031	-5.8078E-05	-0.13965	-6.7413E-05	482.7457535001424	31.583	0.63912	31.69	31.42	32.059	0.10707	-0.0041363	-0.0003697	NaN	44.117	33	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	590840	+		34594	21620	22878	22888							-0.005805737677064826
LSGPDPPSGVR	11	Unmodified	_LSGPDPPSGVR_					0	0	0		ENST00000318217.9_1_17:31203996-31204107:-|nuORF	ENST00000318217.9_1_17:31203996-31204107:-|nuORF	ENST00000318217.9_1_17:31203996-31204107:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.2867431640625	2	541.285463	1080.55637	0.52598	0.00028471	-0.67244	-0.00036398	-0.14646	-7.9278E-05	541.2849430955068	20.499	0.76031	20.43	20.175	20.935	-0.069733					65	32	4	0	0	0	0.64498	1	550	550		39.253	3.6345	1	220230			34595	10005	22879	22889	39499	39499					0.019316534665676954
LSGPDPPSGVR	11	Unmodified	_LSGPDPPSGVR_					0	0	0		ENST00000318217.9_1_17:31203996-31204107:-|nuORF	ENST00000318217.9_1_17:31203996-31204107:-|nuORF	ENST00000318217.9_1_17:31203996-31204107:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	541.2860107421875	2	541.285463	1080.55637	0.12175	6.5901E-05	-0.16321	-8.8345E-05	-0.041464	-2.2444E-05	541.2853268986822	20.124	0.77876	20.2	19.898	20.676	0.075848					97	39	4	0	0	0	0.70737	1	483	483		30.318	1.1682	1	586580			34596	10005	22879	22889	39500	39500					0.019316534665676954
LSGPLLLIIL	10	Unmodified	_LSGPLLLIIL_					0	0	0			REV__ENSG00000119535|ENST00000373106|CSF3R	REV__ENSG00000119535|ENST00000373106|CSF3R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3580932617188	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.85958	1	1908	1908		15.642	0	1	1221500	+		34597	18357	22880	22890	39501	39501					0.18194411107424457
LSGPRLPK	8	Unmodified	_LSGPRLPK_					0	0	0		nc|ENSG00000169994|Q6PIF6-2|MYO7B;nc|ENSG00000169994|Q6PIF6|MYO7B;ENSG00000169994|ENST00000409816|MYO7B;ENST00000496841.5_1_2:128377972-128392002:+|nuORF	nc|ENSG00000169994|Q6PIF6-2|MYO7B	nc|ENSG00000169994|Q6PIF6-2|MYO7B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.8823547363281	2	434.27417	866.533787	1.3861	0.00060196	4.4761	0.0019438	5.8622	0.0025458	434.2742396449562	32.101	1.264	32.095	31.311	32.575	-0.0061455					62	29	3	0	0	0	0.4196	1	1837	1837		16.473	0	1	106700			34598	15086	22881	22891	39502	39502					0.09518098859609836
LSGREIAKK	9	Unmodified	_LSGREIAKK_					0	0	0			REV__ENSG00000092529|ENST00000397163|CAPN3	REV__ENSG00000092529|ENST00000397163|CAPN3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.7936706542969	2	501.308741	1000.60293	0.15188	7.614E-05	-0.23971	-0.00012017	-0.087829	-4.4029E-05	501.30849568883167	18.718	0.58016	18.241	17.937	18.517	-0.47694					28	12	4	0	0	0	0.20789	1	414	414		30.318	0	1	299060	+		34599	17035	22882	22892	39503	39503					0.10265138088504955
LSGRIEKP	8	Unmodified	_LSGRIEKP_					0	0	0			REV__ENST00000505104.5_1_4:9882098-10027590:-|nuORF	REV__ENST00000505104.5_1_4:9882098-10027590:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2709045410156	2	450.269084	898.523616	-1.2372	-0.00055708	4.4318	0.0019955	3.1946	0.0014384	450.2709514885662	109.62	0.86229	109.74	109.65	110.51	0.12289					49	33	2	0	0	0	0.83646	1	11797	11797		12.207	1.3413	1	789160	+		34600	27875	22883	22893	39504	39504					0.07029491134380805
LSGRPAHPGAL	11	Unmodified	_LSGRPAHPGAL_					0	0	0		ENST00000497669.1_1_1:223437887-223438046:-|nuORF	ENST00000497669.1_1_1:223437887-223438046:-|nuORF	ENST00000497669.1_1_1:223437887-223438046:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8063354492188	2	538.30399	1074.59343	-0.44362	-0.0002388	-2.5425	-0.0013686	-2.9861	-0.0016074	538.3023671085856	52.093	0.86408	52.516	52.106	52.97	0.42348					44	20	3	0	0	0	0.48529	1	5234	5234		52.937	1.6012	1	3602500			34601	12812	22884	22894	39505	39505					0.05911369802970512
LSGSKSVVV	9	Unmodified	_LSGSKSVVV_					0	0	0			REV__ENSG00000166197|ENST00000605788|NOLC1	REV__ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2623291015625	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.78124	2	2604	2604;2788		30.318	2.5999	1	22029000	+		34602	21266	22885	22895	39506;39507	39506					0.07010669040244011
LSGSKSVVV	9	Unmodified	_LSGSKSVVV_					0	0	0			REV__ENSG00000166197|ENST00000605788|NOLC1	REV__ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26226806640625	2	438.263468	874.512382	-2.4769	-0.0010856	0.22797	9.991E-05	-2.249	-0.00098564	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.69624	1	3685	3685		40.778	0.20554	1	246320000	+		34603	21266	22885	22895	39508	39508					0.07010669040244011
LSGSKTIGL	9	Unmodified	_LSGSKTIGL_					0	0	0			REV__ENST00000561483.5_1_15:84323016-84694242:+|nuORF	REV__ENST00000561483.5_1_15:84323016-84694242:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26324462890625	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.62081	1	2509	2509		45.952	0	1	3673500	+		34604	20473	22886	22896	39509	39509					0.07010669040232642
LSGSKTIGL	9	Unmodified	_LSGSKTIGL_					0	0	0			REV__ENST00000561483.5_1_15:84323016-84694242:+|nuORF	REV__ENST00000561483.5_1_15:84323016-84694242:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26300048828125	2	438.263468	874.512382	0.15263	6.689E-05	-0.38156	-0.00016722	-0.22893	-0.00010033	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.7932	1	2057	2057		21.96	0	1	11370000	+		34605	20473	22886	22896	39510	39510					0.07010669040232642
LSGSKTIGL	9	Unmodified	_LSGSKTIGL_					0	0	0			REV__ENST00000561483.5_1_15:84323016-84694242:+|nuORF	REV__ENST00000561483.5_1_15:84323016-84694242:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.264892578125	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.7932	1	2857	2857		19.997	0.6368	1	21381000	+		34606	20473	22886	22896	39511	39511					0.07010669040232642
LSGSSCCCCC	10	Unmodified	_LSGSSCCCCC_					0	0	0		ENSG00000080709|ENST00000673685|KCNN2	ENSG00000080709|ENST00000673685|KCNN2	ENSG00000080709|ENST00000673685|KCNN2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.1396484375	2	483.136326	964.2581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.77	1	115.75	115.25	116.25	-0.02433								0	0	0	0.45132	1	12817	12817		12.207	4.5166	1				34607	1450	22887	22897	39512	39512					-0.22545871700424414
LSGVMFKKH	9	Unmodified	_LSGVMFKKH_					0	0	0		chr10:131977765-131981761|15|18.27|0.12|7.24|-|0|None,BNIP3|1	chr10:131977765-131981761|15|18.27|0.12|7.24|-|0|None,BNIP3|1	chr10:131977765-131981761|15|18.27|0.12|7.24|-|0|None,BNIP3|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.79443359375	2	523.794412	1045.57427	0.099108	5.1912E-05	-1.1544	-0.00060466	-1.0553	-0.00055274	523.7937036505126	19.091	1.2071	19.017	18.843	20.05	-0.073702					63	35	3	0	0	0	0.76764	1	422	422		34.173	0.65696	1	115810			34608	69	22888	22898	39513	39513					0.05330697187741862
LSHDPPPCF	9	Unmodified	_LSHDPPPCF_					0	0	0		ENST00000301453.7_1_11:63765124-63765358:+|nuORF	ENST00000301453.7_1_11:63765124-63765358:+|nuORF	ENST00000301453.7_1_11:63765124-63765358:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.753173828125	2	506.731477	1011.4484	2.3547	0.0011932	4.2821	0.0021699	6.6368	0.0033631	507.23522606692813	98.724	0.73902	99.101	98.449	99.188	0.37679					19	17	2	0	0	0	0.20789	1	11941	11941		47.916	0	1	158550			34609	9804	22889	22899	39514	39514					-0.0568643438836034
LSHGGHIL	8	Unmodified	_LSHGGHIL_					0	0	0		nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1;nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;ENSG00000088827|ENST00000344754|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.23382568359375	2	417.235045	832.455536	-1.9853	-0.00082833	-3.8818	-0.0016196	-5.8671	-0.002448	417.2339879254303	32.843	0.79263	32.843	32.595	33.388	0					68	34	3	0	0	0	0.87276	1	1666	1666		29.842	1.5873	1	119600			34610	14795	22890	22900	39515	39515					0.03260666274388768
LSHIVIVMNLI	11	Unmodified	_LSHIVIVMNLI_					0	0	0			REV__ENST00000498289.5_1_1:169773308-169819597:+|nuORF	REV__ENST00000498289.5_1_1:169773308-169819597:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.29766845703125	3	417.921298	1250.74206	2.0603	0.00086105	-3.63	-0.0015171	-1.5697	-0.00065601	417.91983165167704	71.869	0.093246	71.909	71.842	71.935	0.040222					5	3	2	0	0	0	0.1747	1	6904	6904		48.602	21.852	1	27714	+		34611	16037	22891	22901	39516	39516					0.12672339661685328
LSHKLELTAKQ	11	Unmodified	_LSHKLELTAKQ_					0	0	0		nc|ENSG00000107036|Q4ADV7-3|RIC1;ENSG00000107036|ENST00000414202|RIC1;nc|ENSG00000107036|Q4ADV7-2|RIC1;ENST00000276898.3_1_9:5713908-5748617:+|nuORF	nc|ENSG00000107036|Q4ADV7-3|RIC1	nc|ENSG00000107036|Q4ADV7-3|RIC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.37548828125	2	634.372069	1266.72959	6.8438	0.0043415	0.99176	0.00062915	7.8355	0.0049706	634.3726570495403	111.53	0.41818	111.58	111.29	111.71	0.046539					29	15	2	0	0	0	0.67778	1	13515	13515		35.152	0.97948	1	6115700			34612	2328	22892	22902	39517	39517					0.10689019522965282
LSHWKYRWPLQ	11	Unmodified	_LSHWKYRWPLQ_					0	0	0			REV__nc|ENSG00000089101|Q8NHU2-6|CFAP61	REV__nc|ENSG00000089101|Q8NHU2-6|CFAP61	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	505.2708740234375	3	505.273611	1512.799	-1.5092	-0.00076254	-3.2662	-0.0016503	-4.7754	-0.0024129	505.27154254359203	46.83	1.0736	46.83	46.451	47.525	0					106	32	5	0	0	0	0.74002	1	3529	3529		24.276	6.4428	1	3004500	+		34613	29719	22893	22903	39518	39518					0.06311523262388619
LSHYWMPKW	9	Unmodified	_LSHYWMPKW_					0	0	0		nc|ENSG00000070669|P08243-3|ASNS;nc|ENSG00000070669|P08243-2|ASNS;ENSG00000070669|ENST00000394308|ASNS	nc|ENSG00000070669|P08243-3|ASNS	nc|ENSG00000070669|P08243-3|ASNS	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.7227172851562	2	624.305144	1246.59573	1.3422	0.00083797	-4.3029	-0.0026863	-2.9606	-0.0018483	624.3047817505741	112.18	0.092255	112.28	112.2	112.29	0.10638					6	2	3	0	0	0	0.20789	1	12080	12080		17.365	12.459	1	317000			34614	1248	22894	22904	39519	39519					-0.01769917783553865
LSIAKEPKTKP	11	Unmodified	_LSIAKEPKTKP_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	606.3693237304688	2	606.371538	1210.72852	-0.46367	-0.00028116	-2.9355	-0.00178	-3.3992	-0.0020612	606.3696540978959	94.435	3.8289	94.503	93.215	97.044	0.068336					198	90	3	0	0	0	0.7434	1	9763	9763		23.523	0.94304	1	750990	+		34615	24039	22895	22905	39520	39520					0.13158805154057518
LSIEEDVLAA	10	Unmodified	_LSIEEDVLAA_					0	0	0		nc|ENSG00000172673|Q8N1K5-3|THEMIS;nc|ENSG00000172673|Q8N1K5-2|THEMIS;ENSG00000172673|ENST00000368248|THEMIS;nc|ENSG00000172673|Q8N1K5-4|THEMIS	nc|ENSG00000172673|Q8N1K5-3|THEMIS	nc|ENSG00000172673|Q8N1K5-3|THEMIS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2809448242188	2	530.282054	1058.54956	0.40735	0.00021601	-0.51853	-0.00027497	-0.11118	-5.8956E-05	530.2816186259668	76.523	0.6665	76.571	76.104	76.771	0.047981					42	26	2	0	0	0	0.5766	1	7466	7466		51.335	1.8939	1	154180			34616	6782	22896	22906	39521	39521					0.022622957953217337
LSIFAEYYSD	10	Unmodified	_LSIFAEYYSD_					0	0	0			REV__nc|ENSG00000005436|P16383-2|GCFC2	REV__nc|ENSG00000005436|P16383-2|GCFC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.366455078125	2	604.279512	1206.54447	3.2062	0.0019374	2.2437	0.0013558	5.4498	0.0032932	604.2807978790763	104.75	0.69221	104.71	104.41	105.1	-0.04039					27	16	3	0	0	0	0.37624	1	11546	11546		34.173	7.4796	1	182720	+		34617	16086	22897	22907	39522	39522					-0.05054008067304494
LSIHPGAI	8	Unmodified	_LSIHPGAI_					0	0	0		ENSG00000143061|ENST00000369486|IGSF3;nc|ENSG00000143061|O75054-2|IGSF3	ENSG00000143061|ENST00000369486|IGSF3	ENSG00000143061|ENST00000369486|IGSF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.239501953125	2	404.239796	806.465038	0.22918	9.2645E-05	-0.081122	-3.2793E-05	0.14806	5.9853E-05	404.2395972702734	41.99	0.98602	41.959	41.583	42.569	-0.030991					45	23	3	0	0	0	0.9159	1	3104	3104		44.531	7.5026	1	631540			34618	4597	22898	22908	39523	39523					0.05406434559904483
LSIILHLIC	9	Unmodified	_LSIILHLIC_					0	0	0		ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	ENSG00000145780|ENST00000274457|FEM1C	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.853271484375	2	512.814813	1023.61507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.852	1	60.405	59.905	60.905	0.55323								0	0	0	0.29103	1	6342	6342		40.573	1.7665	1				34619	4791	22899	22909	39524	39524					0.10421038507331559
LSILTGLLP	9	Unmodified	_LSILTGLLP_					0	0	0		ENSG00000198691|ENST00000370225|ABCA4	ENSG00000198691|ENST00000370225|ABCA4	ENSG00000198691|ENST00000370225|ABCA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.80047607421875	2	463.799686	925.584819	-1.356	-0.00062891	2.7368	0.0012693	1.3808	0.00064042	463.8008126700971	41.516	1.4901	41.52	41.125	42.615	0.003418					87	36	3	0	0	0	0.7932	1	3115	3115		23.042	4.7181	1	533600			34620	8308	22900	22910	39525	39525					0.11905003113804469
LSIPAVLY	8	Unmodified	_LSIPAVLY_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2650146484375	2	438.265479	874.516405	-1.9277	-0.00084486	-2.8186	-0.0012353	-4.7463	-0.0020801	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.89457	1	2616	2616		37.028	7.1869	1	3507500	+		34621	20899	22901	22911	39526	39526					0.07412758533951092
LSISEQTGYD	10	Unmodified	_LSISEQTGYD_					0	0	0			REV__nc|ENSG00000012048|P38398-8|BRCA1	REV__nc|ENSG00000012048|P38398-8|BRCA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.7568359375	2	556.758943	1111.50333	-1.1808	-0.00065742	-1.5487	-0.00086224	-2.7295	-0.0015197	556.7579565354125	38.992	0.81724	39.547	39.236	40.053	0.55449					39	18	3	0	0	0	0.86106	1	3244	3244		33.922	2.3918	1	713790	+		34622	15654	22902	22912	39527	39527					-0.047957691067495034
LSISLLGK	8	Unmodified	_LSISLLGK_					0	0	0		ENSG00000177728|ENST00000314256|TMEM94;nc|ENSG00000177728|Q12767-3|TMEM94;nc|ENSG00000177728|Q12767-2|TMEM94;ENST00000581453.1_1_17:73492852-73494804:+|nuORF;ENST00000585105.5_1_17:73489877-73495164:+|nuORF	ENSG00000177728|ENST00000314256|TMEM94	ENSG00000177728|ENST00000314256|TMEM94	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.7706604003906	2	415.770929	829.527304	0.24517	0.00010193	-0.10091	-4.1956E-05	0.14426	5.9979E-05	415.77078188730866	82.968	1.0363	83.399	83.004	84.041	0.43108					52	24	3	0	0	0	0.53378	1	9608	9608		74.255	0	1	1431800			34623	7161	22903	22913	39528	39528					0.10572160908247952
LSISLLKT	8	Unmodified	_LSISLLKT_					0	0	0			REV__ENST00000601440.5_1_19:20806846-20807089:-|nuORF	REV__ENST00000601440.5_1_19:20806846-20807089:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713928222656	2	437.784036	873.553519	1.6181	0.00070838	-3.863	-0.0016912	-2.2449	-0.00098278	437.78249913699676	36.654	0.8698	37.094	36.493	37.363	0.44043					25	20	2	0	0	0	0.4196	1	2947	2947		3.1592	0.2298	1	93299	+		34624	29320	22904	22914	39529	39529					0.11168430079726477
LSISLLKT	8	Unmodified	_LSISLLKT_					0	0	0			REV__ENST00000601440.5_1_19:20806846-20807089:-|nuORF	REV__ENST00000601440.5_1_19:20806846-20807089:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713928222656	2	437.784036	873.553519	1.1968	0.00052396	2.4103	0.0010552	3.6072	0.0015792	437.7838507185905	37.007	0.25245	37.493	37.325	37.577	0.48581					7	5	2	0	0	0	0.4196	1	2947	2947		3.1592	0.2298	1	22660	+		34625	29320	22904	22914	39530	39530					0.11168430079726477
LSKCEKQQT	9	Unmodified	_LSKCEKQQT_					0	0	0			REV__ENSG00000111254|ENST00000228850|AKAP3	REV__ENSG00000111254|ENST00000228850|AKAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.7715454101562	2	532.773874	1063.53319	0.15842	8.4404E-05	-3.5602	-0.0018968	-3.4018	-0.0018124	532.7718076701411	48.549	0.69714	48.544	48.171	48.869	-0.0056381					30	15	3	0	0	0	0.76419	1	4031	4031		35.152	2.3396	1	241860	+		34626	17856	22905	22915	39531	39531					0.003968913575818078
LSKDMIFANLK	11	Unmodified	_LSKDMIFANLK_					0	0	0			REV__ENSG00000116032|ENST00000234389|GRIN3B	REV__ENSG00000116032|ENST00000234389|GRIN3B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3526611328125	2	640.357573	1278.70059	1.5776	0.0010102	0.38375	0.00024574	1.9614	0.001256	640.3576428069522	98.956	2.793	99.317	98.237	101.03	0.36136					173	69	3	0	0	0	0.58425	2	11918	11898;11918		45.972	5.9141	1	1011800	+		34627	18173	22906	22916	39532;39533	39533					0.07239158902348208
LSKGDRASL	9	Unmodified	_LSKGDRASL_					0	0	0		ENST00000328257.12_1_11:73882258-73914820:+|nuORF	ENST00000328257.12_1_11:73882258-73914820:+|nuORF	ENST00000328257.12_1_11:73882258-73914820:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.7685546875	2	473.769448	945.524344	0.37537	0.00017784	-0.39462	-0.00018696	-0.019248	-9.1192E-06	473.76915790053243	28.466	0.54151	28.502	28.223	28.764	0.03607					29	16	3	0	0	0	0.75725	1	1368	1368		36.447	3.6343	1	57511			34628	10090	22907	22917	39534	39534					0.049402857834252245
LSKHKRTHTG	10	Unmodified	_LSKHKRTHTG_					0	0	0		nc|ENSG00000256771|O75346-2|ZNF253;ENSG00000256771|ENST00000589717|ZNF253	nc|ENSG00000256771|O75346-2|ZNF253	nc|ENSG00000256771|O75346-2|ZNF253	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.8329467773438	2	582.833446	1163.65234	0.7163	0.00041749	-1.996	-0.0011633	-1.2797	-0.00074584	582.8322944715994	93.943	3.3707	94.171	93.279	96.65	0.22863					214	80	3	0	0	0	0.57924	1	9577	9577		51.193	11.94	1	862210			34629	8902	22908	22918	39535	39535					0.07705846097314861
LSKIRGLMD	9	Unmodified	_LSKIRGLMD_					0	0	0			REV__nc|ENSG00000117013|P56696-2|KCNQ4	REV__nc|ENSG00000117013|P56696-2|KCNQ4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3139038085938	2	516.797152	1031.57975	-0.25276	-0.00013063	1.4729	0.00076119	1.2201	0.00063056	516.797582184399	99.62	0.12323	99.843	99.741	99.864	0.22262					4	2	2	0	0	0	0.20789	1	10383	10383		21.96	0	1	28731	+		34630	18243	22909	22919	39536	39536					0.06522375979557182
LSKKKKKK	8	Unmodified	_LSKKKKKK_					0	0	0		ENSG00000136045|ENST00000412830|PWP1;ENST00000448876.5_1_3:185009682-185009805:+|nuORF	ENSG00000136045|ENST00000412830|PWP1;REV__ENSG00000165923|ENST00000525123|AGBL2	REV__ENSG00000165923|ENST00000525123|AGBL2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.3008117675781	2	494.355494	986.696435	-0.07487	-3.7013E-05	3.7751	0.0018663	3.7003	0.0018292	494.35755879994184	97.638	0.50562	97.695	97.632	98.138	0.056831					14	11	2	0	0	0	0.4196	1	10329	10329		3.9852	0	1	93615			34631	21235;4083	22910	22920	39537	39537					0.2025548226159799
LSKKKKKK	8	Unmodified	_LSKKKKKK_					0	0	0		ENSG00000136045|ENST00000412830|PWP1;ENST00000448876.5_1_3:185009682-185009805:+|nuORF	ENSG00000136045|ENST00000412830|PWP1;REV__ENSG00000165923|ENST00000525123|AGBL2	REV__ENSG00000165923|ENST00000525123|AGBL2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	494.355494	986.696435	-0.82751	-0.00040908	10.071	0.0049786	9.2435	0.0045696	494.3618799878326	97.656	0.51149	97.656	97.337	97.848	0	-0.019392	0.00012861	NaN	3.9852	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113510			34632	21235;4083	22910	22920							0.2025548226159799
LSKKNKSGGI	10	Unmodified	_LSKKNKSGGI_					0	0	0		L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|59|2|sense	L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|59|2|sense	L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|59|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3136596679688	2	516.314023	1030.61349	0.876	0.00045229	-1.3141	-0.00067851	-0.43813	-0.00022621	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.86471	1	10962	10962		30.318	3.6248	1	67025000			34633	14684	22911	22921	39538	39538					0.0994112074295117
LSKLQESTL	9	Unmodified	_LSKLQESTL_					0	0	0			REV__nc|ENSG00000134324|Q14693|LPIN1	REV__nc|ENSG00000134324|Q14693|LPIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.79119873046875	2	509.792589	1017.57063	-0.014535	-7.4098E-06	-0.42761	-0.00021799	-0.44215	-0.0002254	509.79234442663346	55.706	1.0895	55.696	55.119	56.208	-0.010136					92	29	5	0	0	0	0.29259	1	5035	5035		65.465	1.9315	1	5897200	+		34634	19135	22912	22922	39539	39539					0.06254305894856316
LSKPNLWN	8	Unmodified	_LSKPNLWN_					0	0	0			REV__ENST00000540865.5_1_11:62620891-62622014:-|nuORF	REV__ENST00000540865.5_1_11:62620891-62622014:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.26715087890625	2	486.269084	970.523616	-1.0289	-0.00050034	-2.8077	-0.0013653	-3.8366	-0.0018656	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.88601	1	8440	8440		34.173	2.2177	1	1182200	+		34635	28473	22913	22923	39540	39540					0.037174911343640815
LSKPPLEIY	9	Unmodified	_LSKPPLEIY_					0	0	0			REV__ENSG00000101680|ENST00000389658|LAMA1	REV__ENSG00000101680|ENST00000389658|LAMA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.3123779296875	2	530.307875	1058.6012	1.709	0.00090631	-1.7111	-0.00090743	-0.0021009	-1.1141E-06	530.3067422856751	91.578	1.3732	92.028	91.021	92.394	0.44958					52	32	3	0	0	0	0.64555	1	10887	10887		44.377	3.8046	1	309510	+		34636	17296	22914	22924	39541	39541					0.07424084279887211
LSKPSPQKKL	10	Unmodified	_LSKPSPQKKL_					0	0	0		nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1;ENST00000555607.1_1_14:45431624-45475488:+|nuORF;nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1;nc|ENSG00000198718|Q9Y4F4|TOGARAM1;ENSG00000198718|ENST00000361462|TOGARAM1	nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1	nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.3506469726562	2	563.353148	1124.69174	2.3232	0.0013088	-3.4727	-0.0019564	-1.1495	-0.00064759	563.3494373798607	95.975	1.1109	95.918	95.388	96.498	-0.057449					63	25	3	0	0	0	0.86698	1	10274	10274		28.081	3.5623	1	380360			34637	8312	22915	22925	39542	39542					0.13438553328182934
LSKRVQVVQR	10	Unmodified	_LSKRVQVVQR_					0	0	0			REV__ENST00000463722.5_1_7:99695745-99696843:-|nuORF	REV__ENST00000463722.5_1_7:99695745-99696843:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.9226989746094	3	404.922689	1211.74624	-0.10374	-4.2008E-05	0.73989	0.0002996	0.63614	0.00025759	404.9228708571067	20.62	0.57698	19.991	19.718	20.295	-0.62961					32	12	3	0	0	0	0.86014	1	694	694		23.378	0.79825	1	143750	+		34638	27080	22916	22926	39543	39543					0.14883565199579607
LSKSVTLTF	9	Unmodified	_LSKSVTLTF_					0	0	0		nc|ENSG00000131355|Q9BY15-2|ADGRE3;ENSG00000131355|ENST00000253673|ADGRE3	nc|ENSG00000131355|Q9BY15-2|ADGRE3	nc|ENSG00000131355|Q9BY15-2|ADGRE3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2912902832031	2	498.292225	994.569897	-0.35366	-0.00017623	0.32509	0.00016199	-0.028574	-1.4238E-05	498.29222427278074	55.709	0.82693	56.11	55.571	56.398	0.40101					37	19	3	0	0	0	0.47272	1	5736	5736		53.351	0	1	900850			34639	3722	22917	22927	39544	39544					0.07239511245802532
LSKVADKKQ	9	Unmodified	_LSKVADKKQ_					0	0	0			REV__ENSG00000112893|ENST00000261483|MAN2A1	REV__ENSG00000112893|ENST00000261483|MAN2A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.8074951171875	2	508.808574	1015.60259	0.84861	0.00043178	-3.1233	-0.0015892	-2.2747	-0.0011574	508.8072597473503	83.541	2.7911	83.472	82.015	84.806	-0.069313					129	64	3	0	0	0	0.78983	1	8556	8556		27.882	1.8189	1	2497800	+		34640	17970	22918	22928	39545	39545					0.09541718368654983
LSKVQTLHL	9	Unmodified	_LSKVQTLHL_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8178100585938	2	519.818941	1037.62333	1.8559	0.00096475	-3.2785	-0.0017042	-1.4225	-0.00073946	519.8171404866895	95.918	1.5206	96.339	95.506	97.027	0.42051					101	36	3	0	0	0	0.71772	1	11478	11478		39.253	5.7372	1	1896300	+		34641	22878	22919	22929	39546	39546					0.10602308748320866
LSKVQTLHL	9	Unmodified	_LSKVQTLHL_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8175659179688	2	519.818941	1037.62333	0.62872	0.00032682	-1.9112	-0.00099348	-1.2825	-0.00066665	519.8178355105972	96.042	1.6829	96.446	95.572	97.255	0.40451					106	40	3	0	0	0	0.35373	1	11580	11580		60.972	20.194	1	1896000	+		34642	22878	22919	22929	39547	39547					0.10602308748320866
LSKVQTLHL	9	Unmodified	_LSKVQTLHL_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	519.818941	1037.62333	2.4998	0.0012994	-3.8724	-0.002013	-1.3726	-0.00071352	519.8168621135873	96.583	0.77699	96.526	96.067	96.844	-0.056389	0.22242	-0.0014157	NaN	60.972	26	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42179	+		34643	22878	22919	22929							0.10602308748320866
LSKVQTLHL	9	Unmodified	_LSKVQTLHL_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	519.818941	1037.62333	1.1592	0.00060258	-4.2371	-0.0022025	-3.0779	-0.0015999	520.3174165533272	96.393	0.4306	96.441	96.139	96.57	0.047798	0.13689	-0.0017948	NaN	60.972	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49660	+		34644	22878	22919	22929							0.10602308748320866
LSKVQTLHL	9	Unmodified	_LSKVQTLHL_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	519.818941	1037.62333	-0.21453	-0.00011152	-1.6568	-0.00086121	-1.8713	-0.00097273	519.8181154356289	95.9	1.2553	96.131	95.267	96.523	0.23103	-0.17248	0.00088778	NaN	60.972	52	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122190	+		34645	22878	22919	22929							0.10602308748320866
LSKVQTLHL	9	Unmodified	_LSKVQTLHL_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	519.818941	1037.62333	0.7781	0.00040447	-2.6366	-0.0013705	-1.8585	-0.00096607	519.817761003759	95.933	1.224	96.097	95.351	96.575	0.16316	-0.20739	-0.00013088	NaN	60.972	47	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142060	+		34646	22878	22919	22929							0.10602308748320866
LSKVQTLHL	9	Unmodified	_LSKVQTLHL_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	519.818941	1037.62333	-1.5505	-0.00080596	-0.57669	-0.00029978	-2.1272	-0.0011057	519.8189781862689	95.945	1.1834	96.147	95.433	96.617	0.20242	-0.15678	0.0020106	NaN	60.972	51	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87549	+		34647	22878	22919	22929							0.10602308748320866
LSKVSSKRSA	10	Unmodified	_LSKVSSKRSA_					0	0	0			REV__nc|ENSG00000081377|O60729-5|CDC14B	REV__nc|ENSG00000081377|O60729-5|CDC14B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8173217773438	2	531.81693	1061.61931	1.8637	0.00099113	-2.0038	-0.0010657	-0.14016	-7.454E-05	531.8157444108199	88.686	4.0119	88.613	87.337	91.349	-0.07238					352	95	5	0	0	0	0.85834	1	9085	9085		22.58	1.6327	1	4423300	+		34648	16823	22920	22930	39548	39548					0.09096219254638527
LSLASLTF	8	Unmodified	_LSLASLTF_					0	0	0		ENSG00000120279|ENST00000367245|MYCT1	ENSG00000120279|ENST00000367245|MYCT1	ENSG00000120279|ENST00000367245|MYCT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7746887207031	2	426.247286	850.48002	0.614	0.00026172	-4.029	-0.0017173	-3.415	-0.0014556	426.2460020630544	37.518	0.15489	38.004	37.87	38.025	0.48581					5	3	2	0	0	0	0.4196	1	3031	3031		33.516	0	1	70958			34649	3123	22921	22931	39549	39549					0.048798816372254805
LSLATHVK	8	Unmodified	_LSLATHVK_					0	0	0		ENSG00000164674|ENST00000611299|SYTL3	ENSG00000164674|ENST00000611299|SYTL3	ENSG00000164674|ENST00000611299|SYTL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.1959533691406	2	434.766178	867.517802	1.3652	0.00059354	-0.726	-0.00031564	0.63919	0.0002779	434.76563426312265	23.516	1.0225	22.942	22.575	23.598	-0.57415					29	23	2	0	0	0	0.4196	1	1141	1141		60.972	0	1	118680			34650	5988	22922	22932	39550	39550					0.07874392622716186
LSLATHVK	8	Unmodified	_LSLATHVK_					0	0	0		ENSG00000164674|ENST00000611299|SYTL3	ENSG00000164674|ENST00000611299|SYTL3	ENSG00000164674|ENST00000611299|SYTL3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	434.766178	867.517802	0.43266	0.00018811	-0.31745	-0.00013802	0.11522	5.0093E-05	434.7659530333395	23.645	0.47565	23.263	22.973	23.449	-0.38178	0.16062	0.00010903	NaN	40.778	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97752			34651	5988	22922	22932							0.07874392622716186
LSLDDQGRL	9	Unmodified	_LSLDDQGRL_					0	0	0		ENST00000427137.1_1_7:46039264-46039813:-|nuORF	ENST00000427137.1_1_7:46039264-46039813:-|nuORF	ENST00000427137.1_1_7:46039264-46039813:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.77337646484375	2	508.772188	1015.52982	0.078364	3.9869E-05	3.584	0.0018234	3.6623	0.0018633	508.7738658882094	51.548	0.66911	51.983	51.534	52.203	0.43505					33	15	3	0	0	0	0.69624	1	5125	5125		40.778	0	1	685800			34652	11566	22923	22933	39551	39551					0.022679645752418764
LSLEGLGSV	9	Unmodified	_LSLEGLGSV_					0	0	0		ENSG00000213901|ENST00000409878|SLC23A3;nc|ENSG00000213901|Q6PIS1-5|SLC23A3;ENST00000497918.5_1_2:220029863-220033027:-|nuORF	ENSG00000213901|ENST00000409878|SLC23A3	ENSG00000213901|ENST00000409878|SLC23A3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2626647949219	2	437.74765	873.480748	-1.5836	-0.00069321	1.2395	0.00054259	-0.34407	-0.00015062	437.7481316692473	42.47	0.8471	42.474	42.185	43.032	0.0043983					33	25	2	0	0	0	0.20789	1	2822	2822		21.96	0	1	180290			34653	8605	22924	22934	39552	39552					0.03894676286302001
LSLEKPVRTR	10	Unmodified	_LSLEKPVRTR_					0	0	0		ENST00000554105.5_1_15:93856435-93856513:+|nuORF	ENST00000554105.5_1_15:93856435-93856513:+|nuORF	ENST00000554105.5_1_15:93856435-93856513:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.8675537109375	2	599.866954	1197.71936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.641	1	76.689	76.189	77.189	0.047981								0	0	0	0.45132	1	7498	7498		24.519	0	1				34654	13715	22925	22935	39553	39553					0.1284045658840114
LSLFKKMPS	9	Unmodified	_LSLFKKMPS_					0	0	0		nc|ENSG00000171502|Q17RW2-2|COL24A1;ENSG00000171502|ENST00000370571|COL24A1	nc|ENSG00000171502|Q17RW2-2|COL24A1	nc|ENSG00000171502|Q17RW2-2|COL24A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.8070678710938	2	525.804445	1049.59434	0.37077	0.00019495	3.1516	0.0016571	3.5224	0.0018521	525.8059200463551	18.457	0.52204	17.836	17.676	18.198	-0.62141					20	11	3	0	0	0	0.51592	1	403	403		51.193	11.94	1	334860			34655	6675	22926	22936	39554	39554					0.07152448127681055
LSLGPVEP	8	Unmodified	_LSLGPVEP_					0	0	0			REV__chr20:38421098-38431041|19|11.47|0.2|5.85|-|2|SNHG17,SNHG17|1	REV__chr20:38421098-38431041|19|11.47|0.2|5.85|-|2|SNHG17,SNHG17|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.78521728515625	2	406.231636	810.448719	-0.66344	-0.00026951	1.3869	0.00056341	0.72348	0.0002939	406.23206516058264	34.874	0.5899	34.817	34.54	35.129	-0.056385					25	13	2	0	0	0	0.4196	1	2231	2231		68.485	8.1907	1	86706	+		34656	15775	22927	22937	39555	39555					0.03591308603131438
LSLGPVEP	8	Unmodified	_LSLGPVEP_					0	0	0			REV__chr20:38421098-38431041|19|11.47|0.2|5.85|-|2|SNHG17,SNHG17|1	REV__chr20:38421098-38431041|19|11.47|0.2|5.85|-|2|SNHG17,SNHG17|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7847900390625	2	406.231636	810.448719	0.13716	5.5718E-05	0.52207	0.00021208	0.65923	0.0002678	406.2317071025486	34.516	0.89415	34.624	34.344	35.238	0.10829					78	37	3	0	0	0	0.4196	1	1761	1761		38.806	1.647	1	289390	+		34657	15775	22927	22937	39556	39556					0.03591308603131438
LSLGSLLK	8	Unmodified	_LSLGSLLK_					0	0	0		ENSG00000070269|ENST00000261556|TMEM260;nc|ENSG00000070269|Q9NX78-2|TMEM260;nc|ENSG00000070269|Q9NX78-3|TMEM260;ENST00000557626.5_1_14:57046563-57082746:+|nuORF;ENST00000557657.5_1_14:57046563-57079004:+|nuORF	ENSG00000070269|ENST00000261556|TMEM260;ENST00000557626.5_1_14:57046563-57082746:+|nuORF	ENSG00000070269|ENST00000261556|TMEM260	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.7708740234375	2	415.770929	829.527304	0.12488	5.1923E-05	0.15488	6.4395E-05	0.27977	0.00011632	415.77085672324245	82.964	1.0365	83.438	83.045	84.082	0.47383					55	24	3	0	0	0	0.92394	1	9655	9655		47.657	0	1	1050800			34658	1236;13780	22928	22938	39557	39557					0.10572160908236583
LSLGVLLWV	9	Unmodified	_LSLGVLLWV_					0	0	0			REV__nc|ENSG00000164176|O43854-2|EDIL3	REV__nc|ENSG00000164176|O43854-2|EDIL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.31256103515625	2	500.315503	998.616454	-1.2877	-0.00064428	-2.8428	-0.0014223	-4.1306	-0.0020666	500.31397417451893	78.74	0.56955	78.834	78.567	79.136	0.0942					38	16	3	0	0	0	0.67235	1	7415	7415		42.474	1.6963	1	206800	+		34659	21047	22929	22939	39558	39558					0.11708995867741123
LSLHGPAL	8	Unmodified	_LSLHGPAL_					0	0	0			REV__ENST00000311413.4_1_11:119205294-119205741:+|nuORF	REV__ENST00000311413.4_1_11:119205294-119205741:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2393493652344	2	404.239796	806.465038	0.22918	9.2645E-05	-0.081122	-3.2793E-05	0.14806	5.9853E-05	404.2395972702734	41.99	0.98602	41.959	41.583	42.569	-0.030991					45	23	3	0	0	0	0.94132	1	3094	3094		54.765	0	1	631540	+		34660	24903	22930	22940	39559	39559					0.05406434559904483
LSLHKDSADL	10	Unmodified	_LSLHKDSADL_					0	0	0		nc|ENSG00000053702|Q9BQI9-2|NRIP2	nc|ENSG00000053702|Q9BQI9-2|NRIP2	nc|ENSG00000053702|Q9BQI9-2|NRIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.7976684570312	2	549.793121	1097.57169	-0.39654	-0.00021801	4.0817	0.0022441	3.6852	0.0020261	549.795208908674	55.091	0.62726	55.492	55.196	55.824	0.40101					42	14	4	0	0	0	0.63899	1	5646	5646		47.96	0.043923	1	1270900			34661	14753	22931	22941	39560	39560					0.02680520263766084
LSLHKKIRTVD	11	Unmodified	_LSLHKKIRTVD_					0	0	0			REV__ENSG00000107854|ENST00000371627|TNKS2	REV__ENSG00000107854|ENST00000371627|TNKS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2677001953125	3	437.269866	1308.78777	-0.34848	-0.00015238	-4.3855	-0.0019176	-4.7339	-0.00207	437.26783788235974	49.466	1.602	49.926	49.459	51.061	0.45983					122	38	5	0	0	0	0.75457	1	4859	4859		21.032	2.0659	1	4698000	+		34662	17678	22932	22942	39561	39561					0.1457270116827658
LSLIKVAS	8	Unmodified	_LSLIKVAS_					0	0	0		nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4;ENSG00000196159|ENST00000394329|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.77130126953125	2	415.770929	829.527304	0.24517	0.00010193	-0.10091	-4.1956E-05	0.14426	5.9979E-05	415.77078188730866	82.968	1.0363	83.399	83.004	84.041	0.43108					52	24	3	0	0	0	0.91472	1	9632	9632		44.117	0	1	1431800			34663	8020	22933	22943	39562	39562					0.10572160908225214
LSLISTKACY	10	Unmodified	_LSLISTKACY_					0	0	0			REV__ENSG00000214013|ENST00000318010|GANC	REV__ENSG00000214013|ENST00000318010|GANC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.7976684570312	2	549.796817	1097.57908	-0.39654	-0.00021801	-2.6422	-0.0014527	-3.0388	-0.0016707	549.795208908674	55.091	0.62726	55.492	55.196	55.824	0.40101					42	14	4	0	0	0	0.37206	1	5635	5635		66.429	4.3219	1	1270900	+		34664	23642	22934	22944	39563	39563					0.03419536539809087
LSLKRRSD	8	Unmodified	_LSLKRRSD_					0	0	0		ENSG00000198363|ENST00000379454|ASPH;nc|ENSG00000198363|Q12797-10|ASPH	ENSG00000198363|ENST00000379454|ASPH	ENSG00000198363|ENST00000379454|ASPH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7904052734375	2	487.790715	973.566878	-1.5393	-0.00075085	1.3207	0.00064423	-0.21857	-0.00010661	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.88601	1	7998	7998		34.173	0	1	1760400			34665	8267	22935	22945	39564	39564					0.07903680911658739
LSLKTSLIDM	10	Unmodified	_LSLKTSLIDM_					0	0	0		ENSG00000112234|ENST00000369244|FBXL4	ENSG00000112234|ENST00000369244|FBXL4	ENSG00000112234|ENST00000369244|FBXL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8197631835938	2	560.81775	1119.62095	1.394	0.00078178	2.2478	0.0012606	3.6418	0.0020424	560.8189408405052	92.38	3.0704	92.425	91.102	94.172	0.045456					218	72	4	0	0	0	0.86218	1	9686	9686		32.812	7.2384	1	723720			34666	2643	22936	22946	39565	39565					0.06592092228356705
LSLLATSYMA	10	Unmodified	_LSLLATSYMA_					0	0	0			REV__ENSG00000164849|ENST00000444847|GPR146	REV__ENSG00000164849|ENST00000444847|GPR146	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	534.2937622070312	2	535.283543	1068.55253	-1.4999	-0.00080288	-2.1184	-0.0011339	-3.6183	-0.0019368	535.2819252843279	88.346	1.6019	88.515	87.867	89.469	0.16923					56	37	2	0	0	0	0.37624	1	8749	8749		44.117	19.914	1	65820	+		34667	21121	22937	22947	39566	39566					0.020998476485146966
LSLLQHLM	8	Unmodified	_LSLLQHLM_					0	0	0			REV__ENST00000526095.1_1_11:2798856-2869230:+|nuORF	REV__ENST00000526095.1_1_11:2798856-2869230:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.77703857421875	2	477.775688	953.536823	-0.45613	-0.00021793	4.4446	0.0021235	3.9885	0.0019056	477.77766993350735	30.046	0.70521	30.074	29.833	30.538	0.028618					29	15	3	0	0	0	0.86791	1	1955	1955		28.254	2.8041	1	357920	+		34668	16394	22938	22948	39567	39567					0.058196059221018004
LSLLSIWVR	9	Unmodified	_LSLLSIWVR_					0	0	0			REV__ENST00000354386.10_1_14:58955358-58955499:+|nuORF	REV__ENST00000354386.10_1_14:58955358-58955499:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.833984375	2	543.837134	1085.65972	-0.012703	-6.9082E-06	-3.7439	-0.0020361	-3.7566	-0.002043	543.8349141593202	17.498	0.33389	17.015	16.898	17.232	-0.48256					16	7	3	0	0	0	0.51307	1	263	263		51.335	0.14276	1	261160	+		34669	25354	22939	22949	39568	39568					0.12031185645037112
LSLLTPILG	9	Unmodified	_LSLLTPILG_					0	0	0		ENST00000477322.1_1_1:92798926-92846428:+|nuORF;ENSG00000122484|ENST00000610020|RPAP2	ENST00000477322.1_1_1:92798926-92846428:+|nuORF	ENST00000477322.1_1_1:92798926-92846428:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8006286621094	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.7932	1	3426	3426		23.042	0	1	279560			34670	3228	22940	22950	39569	39569					0.11905003113815837
LSLLTQGWLL	10	Unmodified	_LSLLTQGWLL_					0	0	0			REV__ENST00000330714.7_1_21:42780169-42780397:+|nuORF	REV__ENST00000330714.7_1_21:42780169-42780397:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	572.3414306640625	2	572.342249	1142.66995	-1.0839	-0.00062037	-2.8087	-0.0016076	-3.8926	-0.0022279	572.3405796680717	101.72	0.84152	101.74	101.36	102.2	0.01989					36	19	2	0	0	0	0.8651	1	10870	10870		25.574	4.6271	1	371050	+		34671	25115	22941	22951	39570	39570					0.10431748579617306
LSLMLVSTVL	10	Unmodified	_LSLMLVSTVL_					0	0	0		ENSG00000166926|ENST00000684409|MS4A6E	ENSG00000166926|ENST00000684409|MS4A6E	ENSG00000166926|ENST00000684409|MS4A6E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3267211914062	2	538.325211	1074.63587	1.246	0.00067074	2.5964	0.0013977	3.8424	0.0020685	538.3265007556613	105.75	1.5983	105.78	105.12	106.72	0.038322					102	37	4	0	0	0	0.85466	1	11625	11625		20.947	0	1	831700			34672	6249	22942	22952	39571	39571					0.10153584096360646
LSLNRELS	8	Unmodified	_LSLNRELS_					0	0	0			REV__ENST00000433071.2_1_21:32931573-32932426:+|nuORF	REV__ENST00000433071.2_1_21:32931573-32932426:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2646789550781	2	466.263999	930.513445	-0.88011	-0.00041036	1.2728	0.00059348	0.39273	0.00018312	466.2643730930367	36.815	1.3796	36.761	36.157	37.537	-0.053558					53	30	3	0	0	0	0.73851	1	2477	2477		65.803	0	1	260880	+		34673	26643	22943	22953	39572	39572					0.04540883409140406
LSLPFVTT	8	Unmodified	_LSLPFVTT_					0	0	0		nc|ENSG00000108018|Q8WY21-4|SORCS1;ENSG00000108018|ENST00000263054|SORCS1;nc|ENSG00000108018|Q8WY21-3|SORCS1;nc|ENSG00000108018|Q8WY21-2|SORCS1;ENST00000486192.1_1_10:108380089-108389119:-|nuORF	nc|ENSG00000108018|Q8WY21-4|SORCS1	nc|ENSG00000108018|Q8WY21-4|SORCS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2523193359375	2	439.255111	876.49567	-1.004	-0.000441	-4.1358	-0.0018167	-5.1397	-0.0022576	439.2533238623957	90.673	1.937	91.144	90.644	92.581	0.47068					92	46	3	0	0	0	0.90465	1	10765	10765		40.573	3.5441	1	1078300			34674	2387	22944	22954	39573	39573					0.05248168154275845
LSLPLLLTLL	10	Unmodified	_LSLPLLLTLL_					0	0	0			REV__ENST00000553094.1_1_12:106461706-106477791:-|nuORF	REV__ENST00000553094.1_1_12:106461706-106477791:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3740844726562	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.86444	2	2602	2395;2602		14.865	3.3539	1	314410	+		34675	28637	22945	22955	39574;39575	39575					0.18790680278902983
LSLPLLTSVC	10	Unmodified	_LSLPLLTSVC_					0	0	0		nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1;ENSG00000008710|ENST00000262304|PKD1	nc|ENSG00000008710|P98161-2|PKD1	nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3056030273438	2	523.301736	1044.58892	0.69703	0.00036476	2.6051	0.0013632	3.3021	0.001728	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.85934	1	8380	8380		35.618	5.3006	1	3801600			34676	14737	22946	22956	39576	39576					0.06840724545213561
LSLPTPSP	8	Unmodified	_LSLPTPSP_					0	0	0			REV__ENST00000465703.5_1_6:31930825-31931197:+|nuORF	REV__ENST00000465703.5_1_6:31930825-31931197:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78515625	2	406.231636	810.448719	1.6056	0.00065225	-0.8847	-0.00035939	0.72091	0.00029286	406.23111645050363	34.708	0.79842	34.714	34.293	35.091	0.0063934					33	19	2	0	0	0	0.4196	1	2132	2132		40.573	0	1	99272	+		34677	27115	22947	22957	39577	39577					0.03591308603131438
LSLPVLLSS	9	Unmodified	_LSLPVLLSS_					0	0	0		ENST00000359534.3_1_6:39158079-39158430:-|nuORF	ENST00000359534.3_1_6:39158079-39158430:-|nuORF	ENST00000359534.3_1_6:39158079-39158430:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.79095458984375	2	464.789318	927.564084	-1.1356	-0.00052781	3.8995	0.0018125	2.764	0.0012847	464.7910242247121	36.975	1.5496	36.999	36.145	37.695	0.023624					81	41	3	0	0	0	0.7932	1	2079	2079		21.96	0	1	297830			34678	10428	22948	22958	39578	39578					0.09740412734140591
LSLPVLLSS	9	Unmodified	_LSLPVLLSS_					0	0	0		ENST00000359534.3_1_6:39158079-39158430:-|nuORF	ENST00000359534.3_1_6:39158079-39158430:-|nuORF	ENST00000359534.3_1_6:39158079-39158430:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7909851074219	2	464.789318	927.564084	0.17035	7.9177E-05	2.8409	0.0013204	3.0113	0.0013996	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.78983	1	1771	1771		27.882	0	1	283920			34679	10428	22948	22958	39579	39579					0.09740412734140591
LSLPVPHLSL	10	Unmodified	_LSLPVPHLSL_					0	0	0			REV__ENST00000444867.1_1_7:84783031-84816134:-|nuORF	REV__ENST00000444867.1_1_7:84783031-84816134:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3262329101562	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.86718	1	12368	12368		27.882	2.3082	1	4041000	+		34680	26792	22949	22959	39580	39580					0.10939479408125408
LSLQKSMQTSV	11	Unmodified	_LSLQKSMQTSV_					0	0	0			REV__ENST00000509525.5_1_5:132556617-132561512:-|nuORF	REV__ENST00000509525.5_1_5:132556617-132561512:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3313598632812	2	611.329013	1220.64347	-0.40721	-0.00024894	0.94176	0.00057572	0.53455	0.00032679	611.3294350755532	78.668	0.95905	78.724	78.415	79.375	0.056122					53	26	3	0	0	0	0.53361	1	7657	7657		49.536	3.0793	1	307880	+		34681	16387	22950	22960	39581	39581					0.04197691625972766
LSLQLQKKNH	10	Unmodified	_LSLQLQKKNH_					0	0	0		nc|ENSG00000160299|O95613-2|PCNT;ENSG00000160299|ENST00000359568|PCNT	nc|ENSG00000160299|O95613-2|PCNT	nc|ENSG00000160299|O95613-2|PCNT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5744934082031	3	403.575178	1207.70371	-1.7546	-0.00070812	0.79854	0.00032227	-0.95608	-0.00038585	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.85692	1	8040	8040		36.318	1.1394	1	1090300			34682	5577	22951	22961	39582	39582					0.10816170071393572
LSLSLGLK	8	Unmodified	_LSLSLGLK_					0	0	0		ENST00000542411.5_1_11:61123996-61125228:-|nuORF;ENST00000538263.5_1_11:61123519-61125228:-|nuORF	ENST00000542411.5_1_11:61123996-61125228:-|nuORF	ENST00000542411.5_1_11:61123996-61125228:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.77105712890625	2	415.770929	829.527304	0.24517	0.00010193	-0.10091	-4.1956E-05	0.14426	5.9979E-05	415.77078188730866	82.968	1.0363	83.399	83.004	84.041	0.43108					52	24	3	0	0	0	0.42407	1	9620	9620		79.451	0	1	1431800			34683	13463	22952	22962	39583	39583					0.10572160908236583
LSLSLPLVS	9	Unmodified	_LSLSLPLVS_					0	0	0		ENST00000533683.6_2_19:14198965-14199232:-|nuORF	ENST00000533683.6_2_19:14198965-14199232:-|nuORF	ENST00000533683.6_2_19:14198965-14199232:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.791259765625	2	464.789318	927.564084	0.1718	7.9849E-05	2.8678	0.0013329	3.0395	0.0014127	464.7905115336865	34.402	1.3055	34.346	33.931	35.236	-0.055149					140	57	3	0	0	0	0.74721	2	1768	1762;1768		37.159	1.5408	1	289420			34684	13399	22953	22963	39584;39585	39585					0.0974041273415196
LSLSRNKVFVF	11	Unmodified	_LSLSRNKVFVF_					0	0	0		nc|ENSG00000183765|O96017-8|CHEK2;nc|ENSG00000183765|O96017-7|CHEK2;nc|ENSG00000183765|O96017-12|CHEK2;ENSG00000183765|ENST00000404276|CHEK2;nc|ENSG00000183765|O96017-9|CHEK2	nc|ENSG00000183765|O96017-8|CHEK2	nc|ENSG00000183765|O96017-8|CHEK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2566833496094	3	437.259079	1308.75541	-0.16089	-7.0349E-05	-3.8349	-0.0016768	-3.9958	-0.0017472	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.69687	1	10482	10482		32.034	4.3902	1	727380			34685	7557	22954	22964	39586	39586					0.11337913765260055
LSLSRSVL	8	Unmodified	_LSLSRSVL_					0	0	0		ENST00000457348.5_1_1:203269502-203269697:-|nuORF	ENST00000457348.5_1_1:203269502-203269697:-|nuORF	ENST00000457348.5_1_1:203269502-203269697:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.6791687011719	2	437.77146	873.528367	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.765	1	71.844	71.344	72.344	0.079163								0	0	0	0.29871	1	6522	6522		23.042	1.0826	1				34686	11977	22955	22965	39587	39587					0.08654375277149029
LSLSSTPPGKE	11	Unmodified	_LSLSSTPPGKE_					0	0	0		ENSG00000151725|ENST00000281453|CENPU;nc|ENSG00000151725|Q71F23-3|CENPU	ENSG00000151725|ENST00000281453|CENPU	ENSG00000151725|ENST00000281453|CENPU	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.3004760742188	2	558.300778	1114.587	1.0403	0.00058079	0.56259	0.00031409	1.6029	0.00089488	558.3007929714444	27.952	0.71391	27.698	27.454	28.168	-0.25465					33	16	3	0	0	0	0.72106	1	1699	1699		28.081	0.19925	1	183130			34687	5139	22956	22966	39588	39588					0.034293870609417354
LSLTEGLGLG	10	Unmodified	_LSLTEGLGLG_					0	0	0		ENSG00000184350|ENST00000389832|MRGPRE	ENSG00000184350|ENST00000389832|MRGPRE	ENSG00000184350|ENST00000389832|MRGPRE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2756652832031	2	480.274032	958.533512	-0.14768	-7.0928E-05	0.4279	0.00020551	0.28022	0.00013458	480.27414686344235	56.98	0.78465	57.536	57.181	57.965	0.55512					49	18	3	0	0	0	0.344	1	5910	5910		68.787	1.2932	1	1958100			34688	7601	22957	22967	39589	39589					0.05258634349104341
LSLTLHFRQRL	11	Unmodified	_LSLTLHFRQRL_					0	0	0			REV__ENSG00000008300|ENST00000164024|CELSR3	REV__ENSG00000008300|ENST00000164024|CELSR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.9490661621094	3	461.945494	1382.81465	2.7802	0.0012843	2.8441	0.0013138	5.6243	0.0025981	461.9467411466651	107.89	0.36398	107.86	107.55	107.92	-0.031487					28	8	4	0	0	0	0.66009	1	11966	11966		37.508	5.474	1	78237000	+		34689	16134	22958	22968	39590	39590					0.13855809779465744
LSLTLHFRQRL	11	Unmodified	_LSLTLHFRQRL_					0	0	0			REV__ENSG00000008300|ENST00000164024|CELSR3	REV__ENSG00000008300|ENST00000164024|CELSR3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	461.945494	1382.81465	2.7802	0.0012843	2.8441	0.0013138	5.6243	0.0025981	461.9467411466651	107.89	0.36398	107.86	107.55	107.92	-0.031487	-0.038035	-0.0029989	NaN	37.508	28	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78237000	+		34690	16134	22958	22968							0.13855809779465744
LSLTLHFRQRL	11	Unmodified	_LSLTLHFRQRL_					0	0	0			REV__ENSG00000008300|ENST00000164024|CELSR3	REV__ENSG00000008300|ENST00000164024|CELSR3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	461.945494	1382.81465	1.5031	0.00069436	3.984	0.0018404	5.4871	0.0025347	461.94734649330695	107.86	0.30511	107.94	107.71	108.01	0.084457	0.041328	-0.0014193	NaN	37.508	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3467300	+		34691	16134	22958	22968							0.13855809779465744
LSLTLHFRQRL	11	Unmodified	_LSLTLHFRQRL_					0	0	0			REV__ENSG00000008300|ENST00000164024|CELSR3	REV__ENSG00000008300|ENST00000164024|CELSR3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	461.945494	1382.81465	4.6037	0.0021267	1.0879	0.00050253	5.6916	0.0026292	461.9459132520771	107.86	0.25144	107.97	107.79	108.04	0.11715	0.072558	-0.0054328	NaN	37.508	18	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6093800	+		34692	16134	22958	22968							0.13855809779465744
LSLTLILPVVR	11	Unmodified	_LSLTLILPVVR_					0	0	0			REV__ENST00000398395.7_2_X:13778416-13778464:+|nuORF	REV__ENST00000398395.7_2_X:13778416-13778464:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	409.29241943359375	3	408.607708	1222.80129	-2.1641	-0.00088425	-1.382	-0.0005647	-3.5461	-0.001449	408.60688771051144	19.137	0.68278	19.137	18.864	19.547	0					41	23	2	0	0	0	0.17243	1	405	405		22.562	9.6041	1	54001	+		34693	26202	22959	22969	39591	39591					0.19880558947511418
LSLTQKMHKS	10	Unmodified	_LSLTQKMHKS_					0	0	0			REV__nc|ENSG00000177054|Q8IUH4-2|ZDHHC13	REV__nc|ENSG00000177054|Q8IUH4-2|ZDHHC13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	586.823974609375	2	586.82644	1171.63833	-0.73461	-0.00043109	-3.8334	-0.0022495	-4.568	-0.0026806	586.8240526511282	110.44	1.1405	110.38	110.12	111.26	-0.055084					146	40	5	0	0	0	0.86218	2	12000	12000;12014		32.812	6.1195	1	9161800	+		34694	22175	22960	22970	39592;39593	39592					0.059374325540147765
LSLTQKMHKS	10	Unmodified	_LSLTQKMHKS_					0	0	0			REV__nc|ENSG00000177054|Q8IUH4-2|ZDHHC13	REV__nc|ENSG00000177054|Q8IUH4-2|ZDHHC13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	586.8233642578125	2	586.82644	1171.63833	-1.3322	-0.00078178	-3.0274	-0.0017765	-4.3596	-0.0025583	586.8245139842418	110.15	1.3506	110.15	109.98	111.33	0.0060501					111	48	4	0	0	0	0.8545	1	11736	11736		36.447	2.5251	1	5492600	+		34695	22175	22960	22970	39594	39594					0.059374325540147765
LSLVTGLK	8	Unmodified	_LSLVTGLK_					0	0	0		ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.7710876464844	2	415.770929	829.527304	0.12488	5.1923E-05	0.15488	6.4395E-05	0.27977	0.00011632	415.77085672324245	82.964	1.0365	83.438	83.045	84.082	0.47383					55	24	3	0	0	0	0.87259	1	9643	9643		58.782	0	1	1050800			34696	12055	22961	22971	39595	39595					0.10572160908236583
LSLVVWVSS	9	Unmodified	_LSLVVWVSS_					0	0	0		ENST00000262894.10_1_19:44617601-44617643:+|nuORF	ENST00000262894.10_1_19:44617601-44617643:+|nuORF	ENST00000262894.10_1_19:44617601-44617643:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	495.2873229980469	2	495.286943	988.559333	0.50869	0.00025195	-1.5106	-0.0007482	-1.002	-0.00049625	495.28593815824195	68.677	0.4753	68.805	68.592	69.067	0.12838					28	17	2	0	0	0	0.76255	1	6197	6197		35.618	5.1146	1	120640			34697	9449	22962	22972	39596	39596					0.06459528591381059
LSLYQLHSL	9	Unmodified	_LSLYQLHSL_					0	0	0			REV__nc|ENSG00000168481|Q8N145-2|LGI3	REV__nc|ENSG00000168481|Q8N145-2|LGI3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.3006591796875	2	537.303124	1072.5917	0.35186	0.00018905	-4.1531	-0.0022314	-3.8012	-0.0020424	537.3007589479149	50.199	0.83301	50.202	49.855	50.688	0.0035973					51	18	4	0	0	0	0.48102	1	4308	4308		52.937	1.6012	1	980940	+		34698	30016	22963	22973	39597	39597					0.058303159943761784
LSLYSTSL	8	Unmodified	_LSLYSTSL_					0	0	0		ENSG00000047621|ENST00000261250|C12orf4	ENSG00000047621|ENST00000261250|C12orf4	ENSG00000047621|ENST00000261250|C12orf4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2415771484375	2	442.242201	882.469849	-0.15416	-6.8174E-05	-2.6265	-0.0011616	-2.7807	-0.0012297	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.91005	1	7670	7670		42.474	8.9589	1	1068200			34699	965	22964	22974	39598	39598					0.023912739120078186
LSMCGYVAFS	10	Unmodified	_LSMCGYVAFS_					0	0	0		nc|ENSG00000112494|Q86WB7-2|UNC93A;ENSG00000112494|ENST00000230256|UNC93A	nc|ENSG00000112494|Q86WB7-2|UNC93A	nc|ENSG00000112494|Q86WB7-2|UNC93A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.2418823242188	2	539.240821	1076.46709	-0.49303	-0.00026586	3.1433	0.001695	2.6503	0.0014291	539.2423567514398	61.882	0.81338	61.912	61.473	62.287	0.029579					71	34	3	0	0	0	0.43769	1	5747	5747		60.972	0.67798	1	661710			34700	2665	22965	22975	39599	39599					-0.0680864080882202
LSMEDQLY	8	Oxidation (M)	_LSM(Oxidation (M))EDQLY_		LSM(1)EDQLY		LSM(61)EDQLY	0	0	1		ENSG00000083097|ENST00000349129|DOP1A	ENSG00000083097|ENST00000349129|DOP1A	ENSG00000083097|ENST00000349129|DOP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	507.7269287109375	2	507.726058	1013.43756	-1.099	-0.000558	1.1659	0.00059195	0.066861	3.3947E-05	507.72646908939527	67.887	1.4506	67.917	67.147	68.598	0.030571					81	57	2	0	0	0	0.83456	1	6479	6479		60.972	10.947	1	90130			34701	1496	22966	22976	39600	39600		29			-0.06861881553300009
LSMEDQLY	8	Oxidation (M)	_LSM(Oxidation (M))EDQLY_					0	0	1		ENSG00000083097|ENST00000349129|DOP1A	ENSG00000083097|ENST00000349129|DOP1A	ENSG00000083097|ENST00000349129|DOP1A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	507.726058	1013.43756	-0.4157	-0.00021106	0.36527	0.00018546	-0.050436	-2.5608E-05	507.7261271570995	68.048	1.2191	68.012	67.339	68.558	-0.036293	0.009372	-0.00016805	NaN	60.972	75	45	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121600			34702	1496	22966	22976				29			-0.06861881553300009
LSMFVSHL	8	Unmodified	_LSMFVSHL_					0	0	0			REV__chr8:116658980-116689073|22|32.5|0.07|8.85|-|2|TE_info:L1MB7,L1MB7_dup10252,L1,LINE,donor,+,116689073,116689434|EIF3H,None|4	REV__chr8:116658980-116689073|22|32.5|0.07|8.85|-|2|TE_info:L1MB7,L1MB7_dup10252,L1,LINE,donor,+,116689073,116689434|EIF3H,None|4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2490234375	2	467.246763	932.478974	-0.20878	-9.7553E-05	3.0486	0.0014244	2.8398	0.0013269	467.24791035184415	64.069	0.72615	64.623	64.256	64.982	0.55444					41	16	3	0	0	0	0.92457	1	6949	6949		47.916	3.7988	1	336490	+		34703	15916	22967	22977	39601	39601					0.010033439966832702
LSMLKKRR	8	Unmodified	_LSMLKKRR_					0	0	0			REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3139038085938	2	516.328953	1030.64335	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.42	1	114.48	113.98	114.98	0.061073								0	0	0	0.3037	1	12230	12230		18.324	0.95945	1		+		34704	28014	22968	22978	39602	39602					0.1292578120728649
LSMLKLEVV	9	Unmodified	_LSMLKLEVV_					0	0	0			REV__chr17:40751326-40751513|21|564.1|0.0|25.75|-|2|TE_info:L3,L3_dup41101,CR1,LINE,donor,-,40751513,40751677|KRT25,None|4	REV__chr17:40751326-40751513|21|564.1|0.0|25.75|-|2|TE_info:L3,L3_dup41101,CR1,LINE,donor,-,40751513,40751677|KRT25,None|4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3150024414062	2	516.312103	1030.60965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.496	1	21.432	20.932	21.932	-0.064058								0	0	0	0.32159	1	597	597		23.042	4.7804	1		+		34705	15652	22969	22979	39603	39603					0.09557314924859384
LSMMCLLYV	9	Carbamidomethyl (C)	_LSMMC(Carbamidomethyl (C))LLYV_	LSMMC(1)LLYV		LSMMC(52)LLYV		0	1	0		ENST00000528611.1_1_1:39794090-39794144:+|nuORF	ENST00000528611.1_1_1:39794090-39794144:+|nuORF	ENST00000528611.1_1_1:39794090-39794144:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.2842407226562	2	565.276349	1128.53814	0.57533	0.00032522	4.1956	0.0023717	4.7709	0.0026969	565.2811341339949	75.941	0.86041	76.51	76.068	76.929	0.56836					61	20	5	0	0	0	0.49378	1	8638	8638		52.299	9.4349	1	736060			34706	13303	22970	22980	39604	39604	180				-0.020982640956617615
LSMMDGGP	8	Unmodified	_LSMMDGGP_					0	0	0			REV__ENSG00000131023|ENST00000543571|LATS1	REV__ENSG00000131023|ENST00000543571|LATS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.1694030761719	2	404.172407	806.330261	-1.5918	-0.00064335	-4.3613	-0.0017627	-5.953	-0.0024061	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.84341	1	7320	7320		24.203	2.5004	1	6183600	+		34707	18930	22971	22981	39605	39605					-0.08065129968520068
LSNHVFVF	8	Unmodified	_LSNHVFVF_					0	0	0		ENSG00000151376|ENST00000524826|ME3	ENSG00000151376|ENST00000524826|ME3	ENSG00000151376|ENST00000524826|ME3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.75616455078125	2	481.758352	961.502152	-1.4795	-0.00071278	-2.2446	-0.0010814	-3.7242	-0.0017941	481.7570239648171	57.421	0.72549	57.421	57.132	57.857	0					69	29	3	0	0	0	0.88915	1	4945	4945		35.201	6.0512	1	340950			34708	5112	22972	22982	39606	39606					0.019861061056644758
LSNLLSANS	9	Unmodified	_LSNLLSANS_					0	0	0			REV__ENSG00000105538|ENST00000222145|RASIP1	REV__ENSG00000105538|ENST00000222145|RASIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	459.7476806640625	2	459.748182	917.481811	-0.49337	-0.00022683	0.71598	0.00032917	0.22261	0.00010234	459.7483445392968	26.213	0.75562	25.956	25.594	26.35	-0.2572					26	16	2	0	0	0	0.30689	1	1423	1423		64.207	4.089	1	161830	+		34709	17548	22973	22983	39607	39607					0.01976890655180341
LSNMMFFQPI	10	Unmodified	_LSNMMFFQPI_					0	0	0			REV__ENST00000567982.5_1_16:57499867-57500092:+|nuORF	REV__ENST00000567982.5_1_16:57499867-57500092:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	614.2986450195312	2	614.29867	1226.58279	-0.82179	-0.00050483	0.33146	0.00020362	-0.49033	-0.00030121	614.2987457658554	76.086	0.68958	76.176	75.847	76.537	0.089363					59	22	3	0	0	0	0.57924	1	7076	7076		51.193	1.6567	1	406220	+		34710	28889	22974	22984	39608	39608					-0.021441169579702546
LSNVHKKRVSA	11	Unmodified	_LSNVHKKRVSA_					0	0	0		nc|ENSG00000089250|P29475-3|NOS1;nc|ENSG00000089250|P29475-2|NOS1;ENSG00000089250|ENST00000317775|NOS1;nc|ENSG00000089250|P29475-5|NOS1	nc|ENSG00000089250|P29475-3|NOS1	nc|ENSG00000089250|P29475-3|NOS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8696899414062	2	619.870028	1237.7255	2.311	0.0014325	-3.2878	-0.002038	-0.97675	-0.00060546	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.69248	1	10390	10390		32.751	3.5805	1	4854700			34711	1620	22975	22985	39609	39609					0.11614974819940471
LSNVRHSA	8	Unmodified	_LSNVRHSA_					0	0	0			REV__ENST00000606895.1_1_17:62206241-62206379:-|nuORF	REV__ENST00000606895.1_1_17:62206241-62206379:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2414245605469	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.87922	1	7240	7240		31.955	1.4512	1	716910	+		34712	29378	22976	22986	39610	39610					0.021228632976999506
LSPAAGYVIV	10	Unmodified	_LSPAAGYVIV_					0	0	0		ENST00000486966.1_1_2:101999472-102003919:-|nuORF;ENSG00000175874|ENST00000324768|CREG2	ENST00000486966.1_1_2:101999472-102003919:-|nuORF	ENST00000486966.1_1_2:101999472-102003919:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	495.27862548828125	2	495.286943	988.559333	0.50869	0.00025195	-1.5106	-0.0007482	-1.002	-0.00049625	495.28593815824195	68.677	0.4753	68.805	68.592	69.067	0.12838					28	17	2	0	0	0	0.86589	1	6188	6188		29.15	3.5755	1	120640			34713	7040	22977	22987	39611	39611					0.06459528591381059
LSPARSRVP	9	Unmodified	_LSPARSRVP_					0	0	0			REV__ENST00000609776.1_1_2:222437513-222437723:+|nuORF	REV__ENST00000609776.1_1_2:222437513-222437723:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7955017089844	2	491.793258	981.571963	0.44365	0.00021818	3.4816	0.0017122	3.9252	0.0019304	491.7950876173739	61.702	0.68761	61.821	61.679	62.366	0.11901					43	29	2	0	0	0	0.76255	1	5402	5402		35.618	0	1	220410	+		34714	29419	22978	22988	39612	39612					0.08043984774280943
LSPARSRVP	9	Unmodified	_LSPARSRVP_					0	0	0			REV__ENST00000609776.1_1_2:222437513-222437723:+|nuORF	REV__ENST00000609776.1_1_2:222437513-222437723:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	491.793258	981.571963	-0.16596	-8.162E-05	4.8933	0.0024065	4.7274	0.0023249	491.7956947839768	61.606	2.7592	62.16	61.802	64.561	0.55386	0.17106	0.0001267	NaN	35.618	93	64	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89519	+		34715	29419	22978	22988							0.08043984774280943
LSPDFTFTA	9	Unmodified	_LSPDFTFTA_					0	0	0		ENST00000547997.5_1_12:95650374-95694446:+|nuORF;ENST00000552660.5_1_12:95650374-95694446:+|nuORF;ENSG00000028203|ENST00000436874|VEZT	ENST00000547997.5_1_12:95650374-95694446:+|nuORF	ENST00000547997.5_1_12:95650374-95694446:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7474060058594	2	499.745108	997.475663	0.048924	2.445E-05	3.6813	0.0018397	3.7303	0.0018642	499.74682857522964	74.518	3.0175	75.077	74.05	77.067	0.55891					154	74	3	0	0	0	0.62081	1	8441	8441		45.952	0	1	1021700			34716	876	22979	22989	39613	39613					-0.02317627576326231
LSPDKLLPYL	10	Unmodified	_LSPDKLLPYL_					0	0	0			REV__ENSG00000140835|ENST00000539698|CHST4	REV__ENSG00000140835|ENST00000539698|CHST4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.8438720703125	2	579.842082	1157.66961	-0.90191	-0.00052297	4.456	0.0025838	3.5541	0.0020608	579.8446027793001	102.43	1.6108	102.45	102.08	103.69	0.01989					83	39	4	0	0	0	0.86218	1	10936	10936		32.812	0	1	1265800	+		34717	19645	22980	22990	39614	39614					0.09708328859778703
LSPEGPTEH	9	Unmodified	_LSPEGPTEH_					0	0	0		ENSG00000168631|ENST00000462446|MUCL3	ENSG00000168631|ENST00000462446|MUCL3	ENSG00000168631|ENST00000462446|MUCL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7287292480469	2	483.729989	965.445425	-0.37479	-0.0001813	-2.2485	-0.0010876	-2.6232	-0.0012689	483.72877202413065	74.22	0.99418	74.778	74.499	75.493	0.55891					42	23	2	0	0	0	0.78058	1	8391	8391		30.504	4.9296	1	624100			34718	6421	22981	22991	39615	39615					-0.038679862415278876
LSPELAAGPQ	10	Unmodified	_LSPELAAGPQ_					0	0	0		ENST00000547216.1_1_12:57871100-57871594:-|nuORF;ENST00000546200.5_1_12:57870467-57871594:-|nuORF	ENST00000547216.1_1_12:57871100-57871594:-|nuORF	ENST00000547216.1_1_12:57871100-57871594:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7986145019531	2	491.763832	981.513111	0.46029	0.00022635	-0.83305	-0.00040966	-0.37277	-0.00018331	491.7633943538634	63.689	0.55103	63.812	63.556	64.107	0.12252					40	22	2	0	0	0	0.37624	1	5610	5610		30.318	7.7381	1	116970			34719	13588	22982	22992	39616	39616					0.02161463689287757
LSPGPKYEV	9	Unmodified	_LSPGPKYEV_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;ENST00000493977.1_1_1:228403451-228405103:+|nuORF;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.6878662109375	2	495.26875	988.522947	-1.2612	-0.00062465	0.60734	0.0003008	-0.65389	-0.00032385	495.2688805013343	88.111	0.5197	88.574	88.27	88.79	0.46312					16	12	2	0	0	0	0.20789	1	10422	10422		24.519	4.0374	1	87257			34720	15003;5274	22983	22993	39617	39617					0.02822651694657452
LSPHLGKIPVF	11	Unmodified	_LSPHLGKIPVF_					0	0	0		ENST00000561504.1_1_10:88730503-88743627:+|nuORF	ENST00000561504.1_1_10:88730503-88743627:+|nuORF	ENST00000561504.1_1_10:88730503-88743627:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3709716796875	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.58	1	113.55	113.05	114.05	-0.024811								0	0	0	0.56276	1	12568	12568		9.1829	0	1				34721	13836	22984	22994	39618	39618					0.11739143707836774
LSPHLGKIPVF	11	Unmodified	_LSPHLGKIPVF_					0	0	0		ENST00000561504.1_1_10:88730503-88743627:+|nuORF	ENST00000561504.1_1_10:88730503-88743627:+|nuORF	ENST00000561504.1_1_10:88730503-88743627:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3673706054688	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.65	1	113.63	113.13	114.13	-0.024811								0	0	0	0.56276	1	12578	12578		20.947	0	1				34722	13836	22984	22994	39619	39619					0.11739143707836774
LSPHRIFL	8	Unmodified	_LSPHRIFL_					0	0	0			REV__ENST00000379982.7_1_5:95091424-95099296:+|nuORF	REV__ENST00000379982.7_1_5:95091424-95099296:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.796875	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.85277	1	3662	3662		25.45	3.7478	1	2891800	+		34723	25936	22985	22995	39620	39620					0.08446074267976655
LSPHRIFL	8	Unmodified	_LSPHRIFL_					0	0	0			REV__ENST00000379982.7_1_5:95091424-95099296:+|nuORF	REV__ENST00000379982.7_1_5:95091424-95099296:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956848144531	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.86288	1	3784	3784		26.796	1.3459	1	1219600	+		34724	25936	22985	22995	39621	39621					0.08446074267976655
LSPHRIFL	8	Unmodified	_LSPHRIFL_					0	0	0			REV__ENST00000379982.7_1_5:95091424-95099296:+|nuORF	REV__ENST00000379982.7_1_5:95091424-95099296:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7947998046875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.611	1	63.733	63.233	64.233	0.12252								0	0	0	0.30316	1	5577	5577		42.474	5.446	1		+		34725	25936	22985	22995	39622	39622					0.08446074267976655
LSPHRIFL	8	Unmodified	_LSPHRIFL_					0	0	0			REV__ENST00000379982.7_1_5:95091424-95099296:+|nuORF	REV__ENST00000379982.7_1_5:95091424-95099296:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7986145019531	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.857	1	63.979	63.479	64.479	0.12252								0	0	0	0.29568	1	5610	5610		35.201	1.6851	1		+		34726	25936	22985	22995	39623	39623					0.08446074267976655
LSPHRIFL	8	Unmodified	_LSPHRIFL_					0	0	0			REV__ENST00000379982.7_1_5:95091424-95099296:+|nuORF	REV__ENST00000379982.7_1_5:95091424-95099296:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7962646484375	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.85277	1	4229	4229		25.45	1.2474	1	412030	+		34727	25936	22985	22995	39624	39624					0.08446074267976655
LSPKIEETRI	10	Unmodified	_LSPKIEETRI_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|13|1|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|13|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.34423828125	2	593.34552	1184.67649	0.88436	0.00052473	-2.7449	-0.0016287	-1.8605	-0.0011039	593.343785503265	103.21	2.4131	103.4	103.04	105.46	0.18297					159	60	4	0	0	0	0.8505	1	11026	11026		19.104	0.57247	1	4232500	+		34728	29549	22986	22996	39625	39625					0.09153641740294916
LSPLDTVTH	9	Unmodified	_LSPLDTVTH_					0	0	0			REV__ENST00000526970.5_1_8:144767209-144773249:+|nuORF	REV__ENST00000526970.5_1_8:144767209-144773249:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.26812744140625	2	491.763832	981.513111	-0.7856	-0.00038633	0.37534	0.00018458	-0.41026	-0.00020175	491.76404017316463	63.827	0.57457	63.857	63.658	64.233	0.030243					42	23	2	0	0	0	0.74721	1	5616	5616		37.159	0	1	123660	+		34729	28220	22987	22997	39626	39626					0.02161463689287757
LSPLESQAHSP	11	Unmodified	_LSPLESQAHSP_					0	0	0		nc|ENSG00000133424|O95461-2|LARGE1;ENSG00000133424|ENST00000397394|LARGE1	nc|ENSG00000133424|O95461-2|LARGE1	nc|ENSG00000133424|O95461-2|LARGE1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.06298828125	2	583.296027	1164.5775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.849	1	56.409	55.909	56.909	0.55954								0	0	0	0.56276	1	5764	5764		42.864	0.46813	1				34730	3878	22988	22998	39627	39627					0.001796187754280254
LSPLFHLR	8	Unmodified	_LSPLFHLR_					0	0	0			REV__ENSG00000136367|ENST00000419474|ZFHX2	REV__ENSG00000136367|ENST00000419474|ZFHX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7961120605469	2	491.795269	981.575986	-0.95582	-0.00047007	1.6941	0.00083313	0.73824	0.00036307	491.79612787684647	68.727	0.97743	68.792	68.154	69.131	0.065514					60	39	2	0	0	0	0.87479	1	6125	6125		30.504	1.3541	1	97450	+		34731	19304	22989	22999	39628	39628					0.08446074267988024
LSPLGSPGAPP	11	Unmodified	_LSPLGSPGAPP_					0	0	0			REV__ENSG00000111676|ENST00000396684|ATN1	REV__ENSG00000111676|ENST00000396684|ATN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.1327819824219	2	496.7742	991.533846	1.2445	0.00061825	-0.82241	-0.00040855	0.42211	0.00020969	496.7735009629673	35.84	0.83155	36.28	35.997	36.829	0.44043					43	20	3	0	0	0	0.14975	1	2835	2835		51.335	6.9583	1	377590	+		34732	17886	22990	23000	39629	39629					0.037740540689469526
LSPLKFKAQ	9	Unmodified	_LSPLKFKAQ_					0	0	0		ENSG00000277972|ENST00000613478|CISD3	ENSG00000277972|ENST00000613478|CISD3	ENSG00000277972|ENST00000613478|CISD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3125610351562	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12628	12628		26.693	1.1189	1	4038100			34733	9025	22991	23001	39630	39630					0.10343210236646883
LSPLLTLLG	9	Unmodified	_LSPLLTLLG_					0	0	0			REV__ENST00000569326.2_1_8:145724500-145725055:-|nuORF	REV__ENST00000569326.2_1_8:145724500-145725055:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.7999572753906	2	463.799686	925.584819	0.23374	0.00010841	1.7317	0.00080317	1.9655	0.00091158	463.8003055874184	41.421	1.4891	41.495	41.009	42.498	0.073418					84	40	3	0	0	0	0.7932	1	2723	2723		24.203	0	1	378670	+		34734	28911	22992	23002	39631	39631					0.11905003113815837
LSPLSLGTGW	10	Unmodified	_LSPLSLGTGW_					0	0	0			REV__ENSG00000169715|ENST00000330439|MT1E	REV__ENSG00000169715|ENST00000330439|MT1E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.7822875976562	2	515.782025	1029.5495	0.49912	0.00025744	0.15186	7.8327E-05	0.65098	0.00033576	515.781994279127	15.95	0.34297	15.351	15.212	15.555	-0.59873					12	7	2	0	0	0	0.86589	1	65	65		29.15	1.2673	1	250790	+		34735	21596	22993	23003	39632	39632					0.035903405860153725
LSPLWLPT	8	Unmodified	_LSPLWLPT_					0	0	0		ENST00000272647.9_1_2:128631419-128631482:-|nuORF	ENST00000272647.9_1_2:128631419-128631482:-|nuORF	ENST00000272647.9_1_2:128631419-128631482:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2540283203125	2	463.770929	925.527304	-0.40399	-0.00018736	1.3034	0.0006045	0.89945	0.00041714	463.77121577999725	84.673	0.63789	85.12	84.871	85.509	0.44736					27	15	2	0	0	0	0.4196	1	9914	9914		40.573	0	1	306570			34736	9569	22994	23004	39633	39633					0.06156160908221864
LSPPGQLSPS	10	Unmodified	_LSPPGQLSPS_					0	0	0			REV__ENST00000609172.1_1_4:655569-655713:-|nuORF	REV__ENST00000609172.1_1_4:655569-655713:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.76519775390625	2	491.763832	981.513111	0.46029	0.00022635	-0.83305	-0.00040966	-0.37277	-0.00018331	491.7633943538634	63.689	0.55103	63.812	63.556	64.107	0.12252					40	22	2	0	0	0	0.73395	1	5587	5587		42.864	1.4377	1	116970	+		34737	29408	22995	23005	39634	39634					0.02161463689287757
LSPPLSLF	8	Unmodified	_LSPPLSLF_					0	0	0			REV__ENST00000373218.4_1_10:72182698-72182848:+|nuORF	REV__ENST00000373218.4_1_10:72182698-72182848:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7697448730469	2	437.257654	872.500755	-1.8895	-0.00082619	-3.7871	-0.001656	-5.6766	-0.0024821	437.25593506087205	42.254	1.0339	42.668	42.2	43.234	0.4139					39	25	2	0	0	0	0.4196	1	3824	3824		18.324	1.8513	1	160040	+		34738	25754	22996	23006	39635	39635					0.059404720169027314
LSPPRRVKA	9	Unmodified	_LSPPRRVKA_					0	0	0			REV__nc|ENSG00000006118|Q24JP5-3|TMEM132A	REV__nc|ENSG00000006118|Q24JP5-3|TMEM132A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.3253173828125	2	512.324725	1022.6349	0.39641	0.00020309	-0.71681	-0.00036724	-0.3204	-0.00016415	512.3242771059046	21.552	0.81508	20.923	20.462	21.277	-0.62834					33	20	2	0	0	0	0.6204	1	782	782		45.972	0.020292	1	114470	+		34739	29669	22997	23007	39636	39636					0.12448550562316996
LSPQFRCAQH	10	Unmodified	_LSPQFRCAQH_					0	0	0			REV__ENSG00000006118|ENST00000453848|TMEM132A;REV__nc|ENSG00000006118|Q24JP5-3|TMEM132A	REV__ENSG00000006118|ENST00000453848|TMEM132A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	593.7889404296875	2	593.792932	1185.57131	0.30438	0.00018074	2.058	0.001222	2.3623	0.0014027	593.7940349321498	68.655	0.3189	69.04	68.821	69.14	0.38482					9	7	2	0	0	0	0.37624	1	7562	7562		42.864	5.0528	1	80128	+		34740	16097;29669	22998	23008	39637	39637					-0.014051779370902295
LSPRLNVRRT	10	Unmodified	_LSPRLNVRRT_					0	0	0		ENST00000248437.8_1_2:220116950-220118623:-|nuORF	ENST00000248437.8_1_2:220116950-220118623:-|nuORF	ENST00000248437.8_1_2:220116950-220118623:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.36962890625	2	606.370195	1210.72584	-1.2685	-0.00076921	0.17559	0.00010647	-1.0929	-0.00066273	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.86047	1	9599	9599		23.523	0.48021	1	823240			34741	9280	22999	23009	39638	39638					0.12890394539772387
LSPRPHAGT	9	Unmodified	_LSPRPHAGT_					0	0	0		chr19:57676541-57677914|22|13.59|0.61|4.47|+|2|ZSCAN4,ZSCAN4|3	chr19:57676541-57677914|22|13.59|0.61|4.47|+|2|ZSCAN4,ZSCAN4|3	chr19:57676541-57677914|22|13.59|0.61|4.47|+|2|ZSCAN4,ZSCAN4|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.25738525390625	2	468.256508	934.498464	-1.5153	-0.00070955	-2.1681	-0.0010152	-3.6834	-0.0017248	468.2553507419965	82.534	3.6867	82.66	80.393	84.08	0.12601					150	88	2	0	0	0	0.78983	1	7875	7875		27.882	1.0861	1	169950			34742	297	23000	23010	39639	39639					0.0285943633180068
LSPSVQVL	8	Unmodified	_LSPSVQVL_					0	0	0			REV__nc|ENSG00000130713|Q13868-3|EXOSC2	REV__nc|ENSG00000130713|Q13868-3|EXOSC2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7510986328125	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.672	1	75.626	75.126	76.126	-0.045982								0	0	0	0.29452	1	7471	7471		33.516	0	1		+		34743	18897	23001	23011	39640	39640					0.06383284011531032
LSPVEKRRRGR	11	Unmodified	_LSPVEKRRRGR_					0	0	0		nc|ENSG00000080603|Q6ZRS2-3|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.94317626953125	3	451.944376	1352.8113	-0.066969	-3.0266E-05	-2.5026	-0.001131	-2.5695	-0.0011613	451.9431207678107	53.546	2.822	53.541	51.391	54.213	-0.0053711					204	73	4	0	0	0	0.74022	1	4659	4659		24.232	2.4514	1	724120			34744	1447	23002	23012	39641	39641					0.14900559725447238
LSPVEKRRRGR	11	Unmodified	_LSPVEKRRRGR_					0	0	0		nc|ENSG00000080603|Q6ZRS2-3|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.943603515625	3	451.944376	1352.8113	-0.47573	-0.000215	-1.8575	-0.00083947	-2.3332	-0.0010545	451.9434025086026	55.358	2.0218	55.331	54.102	56.123	-0.027275					115	58	3	0	0	0	0.77205	1	5004	5004		17.167	0	1	431630			34745	1447	23002	23012	39642	39642					0.14900559725447238
LSPVEKRRRGR	11	Unmodified	_LSPVEKRRRGR_					0	0	0		nc|ENSG00000080603|Q6ZRS2-3|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9433898925781	3	451.944376	1352.8113	0.2172	9.8162E-05	-2.8737	-0.0012987	-2.6565	-0.0012006	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.74771	1	4643	4643		22.562	4.7284	1	771970			34746	1447	23002	23012	39643	39643					0.14900559725447238
LSPVKKRTRID	11	Unmodified	_LSPVKKRTRID_					0	0	0		nc|ENSG00000148143|Q96JM2-3|ZNF462;ENSG00000148143|ENST00000277225|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.27301025390625	3	438.273499	1311.79867	2.7278	0.0011955	-3.8738	-0.0016978	-1.146	-0.00050227	438.2717172692411	106.49	1.037	106.46	105.98	107.01	-0.034134					77	23	5	0	0	0	0.71394	1	11786	11786		29.245	1.6011	1	3866800			34747	4934	23003	23013	39644	39644					0.15524103542543344
LSPVKKRTRID	11	Unmodified	_LSPVKKRTRID_					0	0	0		nc|ENSG00000148143|Q96JM2-3|ZNF462;ENSG00000148143|ENST00000277225|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2727355957031	3	438.273499	1311.79867	0.73903	0.0003239	-2.0576	-0.00090178	-1.3185	-0.00057788	438.2725101796097	107.07	1.2292	107.16	106.69	107.92	0.091255					130	29	5	0	0	0	0.74989	1	11508	11508		22.075	0.29506	1	4759800			34748	4934	23003	23013	39645	39645					0.15524103542543344
LSPVKKRTRID	11	Unmodified	_LSPVKKRTRID_					0	0	0		nc|ENSG00000148143|Q96JM2-3|ZNF462;ENSG00000148143|ENST00000277225|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2730712890625	3	438.273499	1311.79867	-1.813	-0.00079457	0.59005	0.0002586	-1.2229	-0.00053597	438.2736679941031	107.15	1.2018	107.19	106.63	107.83	0.036118					118	28	5	0	0	0	0.71394	1	11459	11459		29.245	0.66827	1	2816400			34749	4934	23003	23013	39646	39646					0.15524103542543344
LSPVKWVRVYG	11	Unmodified	_LSPVKWVRVYG_					0	0	0			REV__ENSG00000138073|ENST00000260643|PREB	REV__ENSG00000138073|ENST00000260643|PREB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.8688049316406	3	435.255557	1302.74484	0.47509	0.00020678	-4.1519	-0.0018071	-3.6768	-0.0016003	435.25446809610725	18.503	0.1832	17.881	17.722	17.905	-0.62141					5	3	2	0	0	0	0.17729	1	398	398		12.957	0	1	8475.2	+		34750	19434	23004	23014	39647	39647					0.10557931110838581
LSPVQQYT	8	Unmodified	_LSPVQQYT_					0	0	0		ENSG00000105325|ENST00000441788|FZR1;nc|ENSG00000105325|Q9UM11|FZR1;nc|ENSG00000105325|Q9UM11-3|FZR1	ENSG00000105325|ENST00000441788|FZR1	ENSG00000105325|ENST00000441788|FZR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.24432373046875	2	468.245275	934.475997	-0.1136	-5.3193E-05	-0.96692	-0.00045276	-1.0805	-0.00050595	468.2447176903105	105.86	1.9486	105.84	105.27	107.22	-0.025146					119	45	4	0	0	0	0.85277	1	11527	11527		25.45	0.93098	1	1917000			34751	2202	23005	23015	39648	39648					0.006137921435083626
LSPVSRSYGG	10	Unmodified	_LSPVSRSYGG_					0	0	0		ENSG00000239961|ENST00000291759|LILRA4;nc|ENSG00000239961|P59901-2|LILRA4	ENSG00000239961|ENST00000291759|LILRA4	ENSG00000239961|ENST00000291759|LILRA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.7662353515625	2	511.766906	1021.51926	-0.081197	-4.1554E-05	-0.14397	-7.368E-05	-0.22517	-0.00011523	511.766618328046	27.059	0.49084	26.883	26.658	27.149	-0.17559					23	10	3	0	0	0	0.86471	1	1538	1538		30.318	1.1477	1	161760			34752	8775	23006	23016	39649	39649					0.009359819208157205
LSPVVKPMR	9	Unmodified	_LSPVVKPMR_					0	0	0			REV__ENST00000557619.5_1_14:24034808-24034979:-|nuORF	REV__ENST00000557619.5_1_14:24034808-24034979:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8092651367188	2	513.810062	1025.60557	-1.3833	-0.00071076	-0.62879	-0.00032308	-2.0121	-0.0010338	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.7932	1	4362	4362		19.997	0.6368	1	1148600	+		34753	28651	23007	23017	39650	39650					0.09379270221802471
LSPWDRSH	8	Unmodified	_LSPWDRSH_					0	0	0		ENST00000415708.6_1_3:197508763-197508805:+|nuORF	ENST00000415708.6_1_3:197508763-197508805:+|nuORF	ENST00000415708.6_1_3:197508763-197508805:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.80340576171875	2	499.246141	996.477728	0.36636	0.00018291	3.5243	0.0017595	3.8906	0.0019424	499.2491906613964	52.469	0.13052	52.54	52.458	52.588	0.070713					5	3	2	0	0	0	0.4196	1	4233	4233		16.473	0	1	27196			34754	11385	23008	23018	39651	39651					-0.02065154047852502
LSPYAVLL	8	Unmodified	_LSPYAVLL_					0	0	0			REV__ENST00000481451.1_1_10:124172484-124175387:+|nuORF	REV__ENST00000481451.1_1_10:124172484-124175387:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26275634765625	2	438.265479	874.516405	-1.8646	-0.00081717	-3.5126	-0.0015394	-5.3771	-0.0023566	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.86288	1	2876	2876		26.796	0.10319	1	3384400	+		34755	27441	23009	23019	39652	39652					0.0741275853396246
LSPYPTTMTY	10	Unmodified	_LSPYPTTMTY_					0	0	0			REV__ENSG00000137265|ENST00000380956|IRF4	REV__ENSG00000137265|ENST00000380956|IRF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.275634765625	2	587.278457	1172.54236	0.60166	0.00035334	3.0001	0.0017619	3.6018	0.0021152	587.2800899977933	49.679	0.81891	50.524	50.074	50.893	0.84501					50	19	3	0	0	0	0.51302	1	4847	4847		54.776	3.2486	1	2538400	+		34756	19373	23010	23020	39653	39653					-0.03700760076731058
LSQALIKDFV	10	Unmodified	_LSQALIKDFV_					0	0	0			REV__ENST00000314393.5_1_8:123986411-123986468:+|nuORF	REV__ENST00000314393.5_1_8:123986411-123986468:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.330810546875	2	567.331882	1132.64921	-0.50942	-0.00028901	-1.8517	-0.0010506	-2.3612	-0.0013396	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.8505	1	10727	10727		19.104	2.6304	1	5685000	+		34757	24934	23011	23021	39654	39654					0.08819158199935373
LSQFGRSVFDI	11	Unmodified	_LSQFGRSVFDI_					0	0	0		ENSG00000186666|ENST00000333924|BCDIN3D	ENSG00000186666|ENST00000333924|BCDIN3D	ENSG00000186666|ENST00000333924|BCDIN3D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.5581970214844	3	423.559305	1267.65609	0.32077	0.00013587	-3.4069	-0.001443	-3.0861	-0.0013072	423.5578401374237	18.781	0.50783	18.151	17.936	18.444	-0.62961					30	11	3	0	0	0	0.65746	1	439	439		39.873	4.6949	1	278280			34758	7810	23012	23022	39655	39655					0.03296471080511765
LSQIGLSALY	10	Unmodified	_LSQIGLSALY_					0	0	0			REV__ENST00000538334.1_1_12:121766117-121768505:-|nuORF	REV__ENST00000538334.1_1_12:121766117-121768505:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.8021240234375	2	532.802957	1063.59136	0.89478	0.00047674	-0.48978	-0.00026096	0.405	0.00021579	532.8025426216794	34.595	0.4902	34.805	34.563	35.053	0.21002					18	11	2	0	0	0	0.54701	1	2585	2585		52.937	0.63753	1	475420	+		34759	16957	23013	23023	39656	39656					0.062108962745242025
LSQIGLSALY	10	Unmodified	_LSQIGLSALY_					0	0	0			REV__ENST00000538334.1_1_12:121766117-121768505:-|nuORF	REV__ENST00000538334.1_1_12:121766117-121768505:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.8008422851562	2	532.802957	1063.59136	1.0954	0.00058365	-0.3985	-0.00021232	0.69693	0.00037133	532.8024807604322	34.548	0.40691	34.882	34.682	35.089	0.33364					20	9	3	0	0	0	0.40664	1	2602	2602		63.534	3.4156	1	421800	+		34760	16957	23013	23023	39657	39657					0.062108962745242025
LSQKGALH	8	Unmodified	_LSQKGALH_					0	0	0			REV__ENST00000554913.5_1_14:104163972-104164347:-|nuORF	REV__ENST00000554913.5_1_14:104163972-104164347:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.302978515625	2	427.248152	852.481751	-0.042246	-1.805E-05	-2.8436	-0.0012149	-2.8858	-0.001233	427.2466125525049	69.068	0.41983	69.615	69.282	69.702	0.54693					11	9	2	0	0	0	0.4196	1	7597	7597		55.504	0	1	48943	+		34761	28673	23014	23024	39658	39658					0.049609354458425514
LSQKHPQHS	9	Unmodified	_LSQKHPQHS_					0	0	0		nc|ENSG00000133863|Q9BXT5|TEX15;ENSG00000133863|ENST00000643185|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.275390625	2	531.277972	1060.54139	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.561	1	76.61	76.11	77.11	0.049194								0	0	0	0.32255	1	7399	7399		44.377	0.26039	1				34762	3897	23015	23025	39659	39659					0.013542063892145961
LSQLGSQLQ	9	Unmodified	_LSQLGSQLQ_					0	0	0		ENSG00000183798|ENST00000332312|EMILIN3	ENSG00000183798|ENST00000332312|EMILIN3	ENSG00000183798|ENST00000332312|EMILIN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.2693786621094	2	487.269281	972.52401	0.34359	0.00016742	-0.37546	-0.00018295	-0.031873	-1.5531E-05	487.2690155191596	29.189	1.2984	29.22	28.385	29.683	0.030947					87	44	3	0	0	0	0.096131	1	1419	1419		93.195	5.4412	1	426640			34763	7563	23016	23026	39660	39660					0.03664866063570571
LSQPLGSSK	9	Unmodified	_LSQPLGSSK_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|177|3|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|177|3|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|177|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.758544921875	2	458.758549	915.502546	1.0232	0.00046939	-1.1794	-0.00054107	-0.15625	-7.1681E-05	458.7579560177527	27.906	0.92866	27.652	27.239	28.168	-0.25465					33	21	4	0	0	0	0.48102	1	1663	1663		52.937	8.8199	1	120050			34764	14628	23017	23027	39661	39661					0.04141481034866956
LSQPPLPEKR	10	Unmodified	_LSQPPLPEKR_					0	0	0		nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;ENSG00000111077|ENST00000314250|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF	nc|ENSG00000111077|Q63HR2-2|TNS2	nc|ENSG00000111077|Q63HR2-2|TNS2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.8472900390625	2	582.840405	1163.66626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.949	1	21.949	21.449	22.449	0								0	0	0	0.45132	1	625	625		31.634	3.5528	1				34765	2559	23018	23028	39662	39662					0.09097078805734782
LSQPRKGR	8	Unmodified	_LSQPRKGR_					0	0	0		ENSG00000160224|ENST00000291582|AIRE	ENSG00000160224|ENST00000291582|AIRE	ENSG00000160224|ENST00000291582|AIRE	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76873779296875	2	471.2856	940.556647	-0.47557	-0.00022413	2.1971	0.0010355	1.7216	0.00081135	471.2863379844954	48.966	0.9681	49.426	49.064	50.032	0.45983					34	23	2	0	0	0	0.4196	1	4739	4739		37.159	0	1	197610			34766	5571	23019	23029	39663	39663					0.08399117977091919
LSQPRKGR	8	Unmodified	_LSQPRKGR_					0	0	0		ENSG00000160224|ENST00000291582|AIRE	ENSG00000160224|ENST00000291582|AIRE	ENSG00000160224|ENST00000291582|AIRE	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7687683105469	2	471.2856	940.556647	-0.37774	-0.00017802	1.9667	0.00092688	1.589	0.00074886	471.28634997902884	48.837	1.0424	49.741	49.33	50.372	0.90424					37	25	2	0	0	0	0.4196	1	4706	4706		51.335	0	1	256180			34767	5571	23019	23029	39664	39664					0.08399117977091919
LSQPRSRSTP	10	Unmodified	_LSQPRSRSTP_					0	0	0		ENST00000599752.5_3_19:7505208-7505301:+|nuORF	ENST00000599752.5_3_19:7505208-7505301:+|nuORF	ENST00000599752.5_3_19:7505208-7505301:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.8104248046875	2	564.809636	1127.60472	-0.37649	-0.00021265	2.1567	0.0012181	1.7802	0.0010055	564.8107495054859	109.87	1.7926	109.87	109.6	111.4	0					169	64	4	0	0	0	0.86218	1	11398	11398		32.812	0	1	3988700			34768	14375	23020	23030	39665	39665					0.04602147106470511
LSQRLSLASAP	11	Unmodified	_LSQRLSLASAP_					0	0	0			REV__ENST00000606697.5_1_5:43602969-43603065:-|nuORF	REV__ENST00000606697.5_1_5:43602969-43603065:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.88916015625	2	571.830037	1141.64552	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.097	1	46.018	45.518	46.518	-0.079002								0	0	0	0.56276	1	3360	3360		30.318	1.1682	1		+		34769	29373	23021	23031	39666	39666					0.08036488426091637
LSQSIVMYKS	10	Unmodified	_LSQSIVMYKS_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1;ENST00000584897.5_1_18:2726458-2784452:+|nuORF;nc|ENSG00000101596|A6NHR9-3|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.309814453125	2	578.307549	1154.60055	4.7472	0.0027453	0.43694	0.00025269	5.1841	0.002998	578.3076539040749	109.91	0.57219	109.98	109.84	110.41	0.068001					37	21	2	0	0	0	0.86471	1	13344	13344		30.318	0	1	1955500			34770	1951	23022	23032	39667	39667					0.02942921568546808
LSRCTSFLL	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LSRCTSFLL_					1	0	0		ENST00000580483.5_1_18:10525983-10526091:+|nuORF	ENST00000580483.5_1_18:10525983-10526091:+|nuORF	ENST00000580483.5_1_18:10525983-10526091:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.2879638671875	2	541.289159	1080.56377	-0.80121	-0.00043369	-1.848	-0.0010003	-2.6492	-0.001434	541.2879299434815	70.479	0.87196	70.864	70.506	71.378	0.38416					58	20	4	0	0	0	0.64555	1	7803	7803		44.377	7.2181	1	870440			34771	14095	23023	23033	39668	39668					0.026706697426334358
LSRGGVRK	8	Unmodified	_LSRGGVRK_					0	0	0			REV__nc|ENSG00000288675|I0J062|PANO1	REV__nc|ENSG00000288675|I0J062|PANO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.274169921875	2	436.774868	871.535184	-0.34985	-0.00015281	-2.9642	-0.0012947	-3.314	-0.0014475	436.77383375696394	27.418	1.1225	27.379	27.041	28.164	-0.038523					45	25	2	0	0	0	0.82658	1	1341	1341		21.96	4.5949	1	85606	+		34772	30289	23024	23034	39669	39669					0.09427732948370249
LSRGSARAL	9	Unmodified	_LSRGSARAL_					0	0	0		ENSG00000143162|ENST00000370509|CREG1	ENSG00000143162|ENST00000370509|CREG1	ENSG00000143162|ENST00000370509|CREG1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77752685546875	2	465.777608	929.540663	-1.2002	-0.00055902	1.1319	0.00052724	-0.068228	-3.1779E-05	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.74721	1	7789	7789		37.159	3.6435	1	683640			34773	4607	23025	23035	39670	39670					0.07307411740168845
LSRGVHQS	8	Unmodified	_LSRGVHQS_					0	0	0			REV__CON__Q32PI4	REV__CON__Q32PI4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24169921875	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.87064	1	7411	7411		29.15	1.2673	1	1094000	+	+	34774	16008	23026	23036	39671	39671					0.021228632976999506
LSRHTRIHT	9	Unmodified	_LSRHTRIHT_					0	0	0		nc|ENSG00000213020|Q8N823-2|ZNF611;ENSG00000213020|ENST00000652185|ZNF611	nc|ENSG00000213020|Q8N823-2|ZNF611	nc|ENSG00000213020|Q8N823-2|ZNF611	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8198852539062	2	560.820338	1119.62612	-1.1548	-0.00064764	0.17668	9.9087E-05	-0.97813	-0.00054855	560.8203192234314	92.561	2.9962	92.631	91.312	94.308	0.06987					218	70	4	0	0	0	0.7932	1	9612	9612		26.693	0	1	775670			34775	8574	23027	23037	39672	39672					0.07109576925836336
LSRHTRIHT	9	Unmodified	_LSRHTRIHT_					0	0	0		nc|ENSG00000213020|Q8N823-2|ZNF611;ENSG00000213020|ENST00000652185|ZNF611	nc|ENSG00000213020|Q8N823-2|ZNF611	nc|ENSG00000213020|Q8N823-2|ZNF611	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.8201293945312	2	560.820338	1119.62612	0.78776	0.00044179	-1.7346	-0.00097281	-0.94686	-0.00053102	560.8192753742564	92.439	2.8901	92.598	91.192	94.082	0.15874					209	68	4	0	0	0	0.76255	1	9335	9335		35.618	4.0885	1	872010			34776	8574	23027	23037	39673	39673					0.07109576925836336
LSRKKSKYKN	10	Unmodified	_LSRKKSKYKN_					0	0	0		ENST00000479790.2_1_13:22067163-22067286:-|nuORF	ENST00000479790.2_1_13:22067163-22067286:-|nuORF	ENST00000479790.2_1_13:22067163-22067286:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3796997070312	2	626.380229	1250.7459	1.374	0.00086065	-3.3314	-0.0020867	-1.9574	-0.0012261	626.3778876948486	107.84	0.75342	107.98	107.32	108.07	0.13867					64	18	4	0	0	0	0.86409	1	11536	11536		14.137	0	1	27248000			34777	12419	23028	23038	39674	39674					0.13056145479754377
LSRKLVTRTK	10	Unmodified	_LSRKLVTRTK_					0	0	0			REV__ENST00000460090.5_1_5:68581171-68616103:-|nuORF	REV__ENST00000460090.5_1_5:68581171-68616103:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.3010864257812	2	601.390596	1200.76664	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.714	1	60.745	60.245	61.245	0.0312								0	0	0	0.45132	1	5664	5664		26.063	9.5902	1		+		34778	26996	23029	23039	39675	39675					0.17428735859425615
LSRKPPVC	8	Unmodified	_LSRKPPVC_					0	0	0			REV__ENST00000538597.1_2_11:96117900-96122554:-|nuORF	REV__ENST00000538597.1_2_11:96117900-96122554:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2742614746094	2	450.260205	898.505857	0.68249	0.0003073	-1.0954	-0.00049321	-0.4129	-0.00018591	450.2592152632885	92.892	0.69519	93.051	92.709	93.404	0.15874					30	16	3	0	0	0	0.4196	1	9457	9457		18.324	6.1176	1	383020	+		34779	28437	23030	23040	39676	39676					0.05254452607869098
LSRKTFKF	8	Unmodified	_LSRKTFKF_					0	0	0		ENST00000371471.6_1_20:52193194-52193284:-|nuORF	ENST00000371471.6_1_20:52193194-52193284:-|nuORF	ENST00000371471.6_1_20:52193194-52193284:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.808837890625	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.89494	1	4607	4607		37.159	6.6555	1	771120			34780	10665	23031	23041	39677	39677					0.0904234343945518
LSRKTFKF	8	Unmodified	_LSRKTFKF_					0	0	0		ENST00000371471.6_1_20:52193194-52193284:-|nuORF	ENST00000371471.6_1_20:52193194-52193284:-|nuORF	ENST00000371471.6_1_20:52193194-52193284:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8086547851562	2	513.808377	1025.6022	-0.18035	-9.2668E-05	1.1688	0.00060056	0.98848	0.00050789	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.8537	1	4324	4324		25.574	1.3713	1	1777300			34781	10665	23031	23041	39678	39678					0.0904234343945518
LSRLKKCF	8	Unmodified	_LSRLKKCF_					0	0	0			REV__ENST00000559447.6_3_15:56436656-56535386:-|nuORF	REV__ENST00000559447.6_3_15:56436656-56535386:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.796875	2	497.796955	993.579357	-0.21329	-0.00010617	-1.8514	-0.00092164	-2.0647	-0.0010278	497.7957318764316	48.396	0.83173	48.303	47.807	48.639	-0.093178					51	20	3	0	0	0	0.89494	1	3718	3718		37.159	7.3176	1	388480	+		34782	28746	23032	23042	39679	39679					0.08231001050330633
LSRLLSEKRH	10	Unmodified	_LSRLLSEKRH_					0	0	0		ENSG00000135355|ENST00000369352|GJA10	ENSG00000135355|ENST00000369352|GJA10	ENSG00000135355|ENST00000369352|GJA10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8703002929688	2	619.870028	1237.7255	1.7162	0.0010638	-2.4227	-0.0015017	-0.70652	-0.00043795	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.85251	1	11677	11677		19.997	0	1	4719500			34783	4010	23033	23043	39680	39680					0.11614974819917734
LSRLRRLDLA	10	Unmodified	_LSRLRRLDLA_					0	0	0		ENSG00000188937|ENST00000378220|NYX	ENSG00000188937|ENST00000378220|NYX	ENSG00000188937|ENST00000378220|NYX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.923095703125	3	404.922689	1211.74624	0.44862	0.00018165	0.063043	2.5527E-05	0.51166	0.00020718	404.92260093832465	26.168	1.321	26.213	25.795	27.116	0.045507					105	39	4	0	0	0	0.86151	1	1063	1063		15.333	0.63944	1	304530			34784	7973	23034	23044	39681	39681					0.14883565199602344
LSRPVRGG	8	Unmodified	_LSRPVRGG_					0	0	0			REV__ENST00000285243.6_1_17:48785076-48785277:-|nuORF	REV__ENST00000285243.6_1_17:48785076-48785277:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.2543029785156	2	421.253769	840.492984	-1.7494	-0.00073696	2.1586	0.00090931	0.40915	0.00017236	421.25452750849325	84.126	1.3912	84.264	83.786	85.177	0.13811					78	31	3	0	0	0	0.84341	1	8113	8113		24.203	2.2429	1	553140	+		34785	24632	23035	23045	39682	39682					0.06635757539993392
LSRQLGLVKPP	11	Unmodified	_LSRQLGLVKPP_					0	0	0			REV__chr13:30875366-30882560|23|25.87|0.0|21.3|+|0|TE_info:AluJr,AluJr_dup59073,Alu,SINE,donor,-,30875108,30875366|None,LINC00545|2	REV__chr13:30875366-30882560|23|25.87|0.0|21.3|+|0|TE_info:AluJr,AluJr_dup59073,Alu,SINE,donor,-,30875108,30875366|None,LINC00545|2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2468566894531	3	403.255557	1206.74484	-1.7908	-0.00072217	2.7204	0.001097	0.92952	0.00037483	403.2566873194464	104.07	0.29374	104.24	103.97	104.26	0.17096					8	6	2	0	0	0	0.17705	1	11019	11019		15.337	0	1	52911	+		34786	15562	23036	23046	39683	39683					0.14973931110830563
LSRRGRAL	8	Unmodified	_LSRRGRAL_					0	0	0			REV__nc|ENSG00000100311|P01127-2|PDGFB	REV__nc|ENSG00000100311|P01127-2|PDGFB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7904052734375	2	464.793592	927.572632	-1.8726	-0.00087039	-4.4289	-0.0020585	-6.3015	-0.0029289	464.79142205700754	36.889	1.6787	36.889	35.761	37.439	0					76	39	3	0	0	0	0.80706	1	2099	2099		19.36	0	1	196040	+		34787	17167	23037	23047	39684	39684					0.10594824213978882
LSRSKNKK	8	Unmodified	_LSRSKNKK_					0	0	0		ENST00000514487.1_1_5:180618948-180621294:+|nuORF	ENST00000514487.1_1_5:180618948-180621294:+|nuORF	ENST00000514487.1_1_5:180618948-180621294:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.80078125	2	480.801083	959.587613	1.8221	0.00087609	-1.8297	-0.00087971	-0.0075387	-3.6246E-06	480.8000859655465	94.893	2.2797	95.326	94.801	97.081	0.4324					179	54	5	0	0	0	0.84341	1	11450	11450		24.203	0	1	7713500			34788	13068	23038	23048	39685	39685					0.10620271291327299
LSSAEKEAIK	10	Unmodified	_LSSAEKEAIK_					0	0	0		nc|ENSG00000159082|O43426|SYNJ1;nc|ENSG00000159082|O43426-5|SYNJ1;nc|ENSG00000159082|O43426-4|SYNJ1;ENSG00000159082|ENST00000674351|SYNJ1	nc|ENSG00000159082|O43426|SYNJ1	nc|ENSG00000159082|O43426|SYNJ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3036499023438	2	538.303321	1074.59209	-0.058603	-3.1546E-05	-1.8293	-0.00098472	-1.8879	-0.0010163	538.302151358886	51.836	0.65184	52.504	52.147	52.799	0.66729					37	15	3	0	0	0	0.20373	1	5162	5162		85.161	6.897	1	4738600			34789	15031	23039	23049	39686	39686					0.05777690923537193
LSSDDANVL	9	Unmodified	_LSSDDANVL_					0	0	0		ENSG00000156587|ENST00000287156|UBE2L6	ENSG00000156587|ENST00000287156|UBE2L6	ENSG00000156587|ENST00000287156|UBE2L6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.22943115234375	2	467.229822	932.445091	0.6743	0.00031505	-0.31738	-0.00014829	0.35692	0.00016676	467.22952893172175	23.983	0.88836	24.038	23.587	24.475	0.055487					47	23	3	0	0	0	0.19818	1	822	822		74.255	2.3776	1	227190			34790	5384	23040	23050	39687	39687					-0.023834059613932368
LSSDDANVL	9	Unmodified	_LSSDDANVL_					0	0	0		ENSG00000156587|ENST00000287156|UBE2L6	ENSG00000156587|ENST00000287156|UBE2L6	ENSG00000156587|ENST00000287156|UBE2L6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.2298278808594	2	467.229822	932.445091	-0.2993	-0.00013984	0.55436	0.00025901	0.25506	0.00011917	467.2299347648455	24.431	1.1398	24.385	23.796	24.936	-0.04598					52	25	3	0	0	0	0.11055	1	953	953		90.37	5.209	1	349350			34791	5384	23040	23050	39688	39688					-0.023834059613932368
LSSGAVTLCY	10	Unmodified	_LSSGAVTLCY_					0	0	0			REV__ENST00000508274.5_1_4:13369878-13370058:-|nuORF	REV__ENST00000508274.5_1_4:13369878-13370058:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7823181152344	2	507.252243	1012.48993	-0.87847	-0.00044561	-2.9942	-0.0015188	-3.8726	-0.0019644	507.2504403479369	48.348	1.3975	48.818	48.194	49.591	0.46941					89	34	3	0	0	0	0.37624	1	4734	4734		51.335	8.9393	1	552350	+		34792	27921	23041	23051	39689	39689					-0.01581298419682753
LSSGLGFFVY	10	Unmodified	_LSSGLGFFVY_					0	0	0			REV__ENSG00000135517|ENST00000652304|MIP	REV__ENSG00000135517|ENST00000652304|MIP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.1627807617188	2	545.2844	1088.55425	-0.017851	-9.7337E-06	-3.8572	-0.0021033	-3.875	-0.002113	545.2824098570071	37.688	0.96717	38.174	37.747	38.714	0.48581					54	24	4	0	0	0	0.37624	1	3071	3071		55.504	27.423	1	631370	+		34793	19231	23042	23052	39690	39690					0.01351224728773559
LSSGLGFFVY	10	Unmodified	_LSSGLGFFVY_					0	0	0			REV__ENSG00000135517|ENST00000652304|MIP	REV__ENSG00000135517|ENST00000652304|MIP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	545.2844	1088.55425	-0.58847	-0.00032089	-2.6344	-0.0014365	-3.2229	-0.0017574	545.2827702610208	37.853	0.7644	38.166	37.825	38.589	0.31312	-0.0037314	0.00061236	NaN	55.504	39	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	575360	+		34794	19231	23042	23052							0.01351224728773559
LSSGPQLQKG	10	Unmodified	_LSSGPQLQKG_					0	0	0		ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.781982421875	2	507.782556	1013.55056	-0.62334	-0.00031652	0.21134	0.00010731	-0.412	-0.00020921	507.7824128870662	48.786	0.55515	49.246	48.985	49.54	0.45983					37	13	4	0	0	0	0.44803	1	4749	4749		60.118	8.9256	1	1419600			34795	8672	23043	23053	39691	39691					0.04432554954905754
LSSGQPIIL	9	Unmodified	_LSSGQPIIL_					0	0	0			REV__ENSG00000183246|ENST00000433039|RIMBP3C	REV__ENSG00000183246|ENST00000433039|RIMBP3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2801818847656	2	464.279118	926.543683	-1.9588	-0.00090942	-1.3807	-0.00064102	-3.3395	-0.0015504	464.2782745100043	43.328	0.91542	44.101	43.708	44.624	0.77379					49	22	3	0	0	0	0.47272	1	3958	3958		53.351	0	1	992740	+		34796	22587	23044	23054	39692	39692					0.07747242074333371
LSSHLQAF	8	Unmodified	_LSSHLQAF_					0	0	0		ENSG00000196460|ENST00000428343|RFX8;nc|ENSG00000196460|Q6ZV50|RFX8	ENSG00000196460|ENST00000428343|RFX8	ENSG00000196460|ENST00000428343|RFX8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7389221191406	2	451.74016	901.465767	-0.29804	-0.00013464	0.84405	0.00038129	0.54601	0.00024665	451.7401804401519	30.477	0.43212	30.43	30.229	30.661	-0.047062					19	10	2	0	0	0	0.884	1	1667	1667		33.516	1.5607	1	33182			34797	8061	23045	23055	39693	39693					0.01109229208952911
LSSHRGPIG	9	Unmodified	_LSSHRGPIG_					0	0	0			REV__ENST00000531092.5_1_6:2249133-2397616:+|nuORF	REV__ENST00000531092.5_1_6:2249133-2397616:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.25604248046875	2	462.256508	922.498464	-0.0054579	-2.523E-06	-1.569	-0.00072529	-1.5745	-0.00072782	462.25568540929567	52.25	1.5618	52.917	52.105	53.667	0.66729					71	37	3	0	0	0	0.73802	1	5194	5194		37.812	2.1932	1	3541100	+		34798	28294	23046	23056	39694	39694					0.03411436331816731
LSSIEKAK	8	Unmodified	_LSSIEKAK_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168;REV__ENST00000395499.5_1_6:32144447-32144495:-|nuORF	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2629699707031	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.79929	1	3022	3022		18.324	0.95945	1	4268300			34799	7038;26112	23047	23057	39695	39695					0.07010669040221273
LSSKEVDP	8	Unmodified	_LSSKEVDP_					0	0	0		nc|ENSG00000161011|Q13501-2|SQSTM1;ENSG00000161011|ENST00000389805|SQSTM1	nc|ENSG00000161011|Q13501-2|SQSTM1	nc|ENSG00000161011|Q13501-2|SQSTM1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.72869873046875	2	437.729458	873.444362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.684	1	21.627	21.127	22.127	-0.057203								0	0	0	0.29497	1	617	617		34.173	3.6689	1				34800	5624	23048	23058	39696	39696					0.002577993895670261
LSSLEGHIY	9	Unmodified	_LSSLEGHIY_					0	0	0		nc|ENSG00000011426|Q9NQW6-2|ANLN;ENSG00000011426|ENST00000265748|ANLN	nc|ENSG00000011426|Q9NQW6-2|ANLN	nc|ENSG00000011426|Q9NQW6-2|ANLN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.7622985839844	2	509.763832	1017.51311	-0.75922	-0.00038702	-0.55516	-0.000283	-1.3144	-0.00067003	509.76368484649015	44.648	0.61389	44.614	44.313	44.927	-0.03347					29	13	3	0	0	0	0.31972	1	3590	3590		63.306	9.9548	1	279270			34801	792	23049	23059	39697	39697					0.005054636892737108
LSSLLKKNSHS	11	Unmodified	_LSSLLKKNSHS_					0	0	0			REV__nc|ENSG00000119844|Q6ULP2-7|AFTPH	REV__nc|ENSG00000119844|Q6ULP2-7|AFTPH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	607.3480224609375	2	607.348594	1212.68264	0.46338	0.00028143	-0.19022	-0.00011553	0.27316	0.0001659	607.3483457328194	29.878	0.69024	29.788	29.489	30.179	-0.089544					33	15	3	0	0	0	0.60687	1	1943	1943		43.651	15.569	1	501150	+		34802	18380	23050	23060	39698	39698					0.08480159971850298
LSSLPVCLPC	10	Unmodified	_LSSLPVCLPC_					0	0	0			REV__ENST00000454558.2_2_2:97203122-97203740:+|nuORF	REV__ENST00000454558.2_2_2:97203122-97203740:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.6843872070312	2	516.266838	1030.51912	0.023952	1.2366E-05	-1.6266	-0.00083977	-1.6027	-0.00082741	516.2658222029531	26.62	0.28909	26.581	26.435	26.724	-0.038525					6	5	2	0	0	0	0.37624	1	1202	1202		20.947	0	1	7694.3	+		34803	26925	23051	23061	39699	39699					0.005085226049459379
LSSLSTAFIF	10	Unmodified	_LSSLSTAFIF_					0	0	0		ENST00000209875.8_1_12:54631056-54631176:-|nuORF	ENST00000209875.8_1_12:54631056-54631176:-|nuORF	ENST00000209875.8_1_12:54631056-54631176:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2977905273438	2	543.297507	1084.58046	-1.4063	-0.00076406	0.86028	0.00046739	-0.54606	-0.00029667	543.2978497251211	60.216	0.72805	60.607	60.373	61.101	0.39077					48	20	3	0	0	0	0.19278	2	6370	6370;6380		87.754	12.677	1	1233800			34804	9109	23052	23062	39700;39701	39700					0.04155493900225338
LSSLVVMLHQ	10	Unmodified	_LSSLVVMLHQ_					0	0	0			REV__ENSG00000010322|ENST00000345716|NISCH	REV__ENSG00000010322|ENST00000345716|NISCH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	563.8162841796875	2	563.818084	1125.62162	-1.0471	-0.0005904	-0.50916	-0.00028707	-1.5563	-0.00087747	563.8176364165028	57.434	0.57993	57.434	57.304	57.884	0					32	22	2	0	0	0	0.86272	1	4929	4929		24.519	0.99649	1	88435	+		34805	16165	23053	23063	39702	39702					0.0638293166805397
LSSMSSCRSL	10	Carbamidomethyl (C)	_LSSMSSC(Carbamidomethyl (C))RSL_	LSSMSSC(1)RSL		LSSMSSC(77)RSL		0	1	0			REV__nc|ENSG00000148396|O15027-4|SEC16A	REV__nc|ENSG00000148396|O15027-4|SEC16A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.2646484375	2	564.262816	1126.51108	0.91114	0.00051412	2.3113	0.0013042	3.2224	0.0018183	564.2640197530781	55.961	0.73518	56.521	56.23	56.965	0.55953					32	18	2	0	0	0	0.2575	1	5799	5799		77.318	7.69	1	2405800	+		34806	20115	23054	23064	39703	39703	254				-0.04711656382482943
LSSPADSY	8	Unmodified	_LSSPADSY_					0	0	0		nc|ENSG00000169398|Q05397-2|PTK2;nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-6|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1910705566406	2	420.192708	838.370863	-0.017504	-7.3551E-06	-3.0933	-0.0012998	-3.1109	-0.0013072	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.89494	2	11178	11178;11196		47.916	7.1374	1	4147200			34807	6494	23055	23065	39704;39705	39704					-0.05478749052906551
LSSPRCAA	8	Unmodified	_LSSPRCAA_					0	0	0		ENSG00000168427|ENST00000409223|KLHL30	ENSG00000168427|ENST00000409223|KLHL30	ENSG00000168427|ENST00000409223|KLHL30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.70330810546875	2	402.705263	803.395972	0.54215	0.00021833	-4.1231	-0.0016604	-3.5809	-0.0014421	402.70350422804876	24.881	0.53984	24.931	24.573	25.113	0.050453					18	15	2	0	0	0	0.86288	1	935	935		26.796	1.3459	1	22514			34808	6399	23056	23066	39706	39706					-0.013589727313274125
LSSPREQQIL	10	Unmodified	_LSSPREQQIL_					0	0	0			REV__nc|ENSG00000049618|Q8NFD5-1|ARID1B	REV__nc|ENSG00000049618|Q8NFD5-1|ARID1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	585.82861328125	2	585.827495	1169.64044	0.36546	0.0002141	4.4503	0.0026071	4.8158	0.0028212	585.8299498087534	57.741	1.3417	57.711	57.197	58.539	-0.029865					92	38	3	0	0	0	0.85981	1	5359	5359		35.152	1.2304	1	120850	+		34809	16371	23057	23067	39707	39707					0.062401845634894926
LSSQSMPH	8	Oxidation (M)	_LSSQSM(Oxidation (M))PH_		LSSQSM(1)PH		LSSQSM(53)PH	0	0	1		nc|ENSG00000117400|P40238-2|MPL;ENSG00000117400|ENST00000372470|MPL	nc|ENSG00000117400|P40238-2|MPL	nc|ENSG00000117400|P40238-2|MPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.70404052734375	2	451.70546	901.396366	0.18238	8.2381E-05	-3.539	-0.0015986	-3.3566	-0.0015162	451.7036641485665	30.744	0.56691	30.769	30.483	31.05	0.025013					29	17	2	0	0	0	0.93786	1	1608	1608		53.351	12.779	1	50113			34810	2974	23058	23068	39708	39708					-0.05827597802112905
LSSQWLPC	8	Unmodified	_LSSQWLPC_					0	0	0		ENST00000216129.6_1_22:43563239-43563701:-|nuORF	ENST00000216129.6_1_22:43563239-43563701:-|nuORF	ENST00000216129.6_1_22:43563239-43563701:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.22979736328125	2	467.228571	932.442588	0.6743	0.00031505	2.3606	0.0011029	3.0349	0.001418	467.22952893172175	23.983	0.88836	24.038	23.587	24.475	0.055487					47	23	3	0	0	0	0.79403	1	844	844		63.306	1.1989	1	227190			34811	9129	23059	23069	39709	39709					-0.026335329000289676
LSSRCRMALMK	11	Unmodified	_LSSRCRMALMK_					0	0	0			REV__ENST00000432829.6_1_9:368106-371450:+|nuORF	REV__ENST00000432829.6_1_9:368106-371450:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3927612304688	2	648.340877	1294.6672	-0.0023383	-1.516E-06	-2.2716	-0.0014728	-2.2739	-0.0014743	648.8404010083476	107.76	0.12904	107.72	107.61	107.74	-0.042404					4	2	2	0	0	0	0.17415	1	11733	11733		33.922	3.6039	1	60781	+		34812	26638	23060	23070	39710	39710					0.03165510587109566
LSSRKFQGT	9	Unmodified	_LSSRKFQGT_					0	0	0		ENST00000550411.5_1_12:54651459-54653078:-|nuORF	ENST00000550411.5_1_12:54651459-54653078:-|nuORF	ENST00000550411.5_1_12:54651459-54653078:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2808837890625	2	512.282723	1022.55089	-0.88857	-0.0004552	-1.7897	-0.00091686	-2.6783	-0.0013721	512.2817341917631	86.454	3.0125	86.454	85.618	88.63	0					129	69	2	0	0	0	0.71772	1	8362	8362		39.253	1.4413	1	265310			34813	13654	23061	23071	39711	39711					0.0405197467475773
LSSRVLRQPR	10	Unmodified	_LSSRVLRQPR_					0	0	0		ENST00000468386.2_1_2:70057024-70067283:+|nuORF;ENSG00000087338|ENST00000282570|GMCL1	ENST00000468386.2_1_2:70057024-70067283:+|nuORF	ENST00000468386.2_1_2:70057024-70067283:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.58270263671875	3	404.582556	1210.72584	-0.33509	-0.00013557	0.65931	0.00026675	0.32422	0.00013117	404.58283935188774	30.988	0.89448	30.941	30.538	31.432	-0.047064					48	22	3	0	0	0	0.86763	1	1720	1720		31.634	2.3893	1	104710			34814	12176	23062	23072	39712	39712					0.12890394539772387
LSSSLPLELY	10	Unmodified	_LSSSLPLELY_					0	0	0		ENST00000549922.1_1_12:72962420-73015055:+|nuORF	ENST00000549922.1_1_12:72962420-73015055:+|nuORF	ENST00000549922.1_1_12:72962420-73015055:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3019409179688	2	561.308072	1120.60159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.416	1	55.817	55.317	56.317	0.40101								0	0	0	0.3847	1	5681	5681		68.787	20.871	1				34815	13648	23063	23073	39713	39713					0.04611459209104396
LSSSRGLTF	9	Unmodified	_LSSSRGLTF_					0	0	0			REV__ENST00000518375.1_1_8:105502903-105507508:-|nuORF	REV__ENST00000518375.1_1_8:105502903-105507508:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.26873779296875	2	484.263999	966.513445	0.19323	9.3576E-05	3.79	0.0018354	3.9833	0.0019289	484.265685300379	57.465	0.66853	58.02	57.888	58.557	0.55512					30	16	3	0	0	0	0.20789	1	6010	6010		45.952	0	1	455950	+		34816	20082	23064	23074	39714	39714					0.02884883409149097
LSSSVSFI	8	Unmodified	_LSSSVSFI_					0	0	0		ENST00000486778.1_1_9:101546182-101546722:-|nuORF	ENST00000486778.1_1_9:101546182-101546722:-|nuORF	ENST00000486778.1_1_9:101546182-101546722:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22735595703125	2	420.229094	838.443634	-1.3082	-0.00054975	-1.524	-0.00064043	-2.8322	-0.0011902	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.87922	1	7449	7449		31.955	5.1588	1	419890			34817	12585	23065	23075	39715	39715					0.01795004740540662
LSSSYSFW	8	Unmodified	_LSSSYSFW_					0	0	0		ENST00000358120.2_1_1:248261979-248262807:+|nuORF	ENST00000358120.2_1_1:248261979-248262807:+|nuORF	ENST00000358120.2_1_1:248261979-248262807:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.2720031738281	2	488.724175	975.433798	-1.058	-0.00051706	-3.9895	-0.0019497	-5.0474	-0.0024668	488.72234101533	38.771	0.54606	39.315	39.058	39.604	0.54387					15	12	2	0	0	0	0.4196	1	3255	3255		7.6903	1.7692	1	72393			34818	10403	23066	23076	39716	39716					-0.05490183264851112
LSSTLQLLAM	10	Unmodified	_LSSTLQLLAM_					0	0	0		ENSG00000168229|ENST00000306051|PTGDR;nc|ENSG00000168229|Q13258-2|PTGDR	ENSG00000168229|ENST00000306051|PTGDR	ENSG00000168229|ENST00000306051|PTGDR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.8065795898438	2	538.804642	1075.59473	1.2439	0.00067023	2.5512	0.0013746	3.7951	0.0020448	538.8059653540298	90.569	3.7366	90.615	89.222	92.959	0.046448					245	88	4	0	0	0	0.80179	2	9357	9321;9357		39.253	12.457	1	805100			34819	6383	23067	23077	39717;39718	39718					0.0599582305687818
LSSTLQLLAM	10	Unmodified	_LSSTLQLLAM_					0	0	0		ENSG00000168229|ENST00000306051|PTGDR;nc|ENSG00000168229|Q13258-2|PTGDR	ENSG00000168229|ENST00000306051|PTGDR	ENSG00000168229|ENST00000306051|PTGDR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.8067016601562	2	538.804642	1075.59473	0.058912	3.1742E-05	3.7296	0.0020095	3.7885	0.0020413	538.806607108325	90.57	3.5579	90.787	89.308	92.866	0.21737					211	84	4	0	0	0	0.74274	2	8995	8995;9086		42.396	8.7492	1	874780			34820	6383	23067	23077	39719;39720	39719					0.0599582305687818
LSSTLSVGIVL	11	Unmodified	_LSSTLSVGIVL_					0	0	0			REV__nc|ENSG859|P60507|ERVFC1	REV__nc|ENSG859|P60507|ERVFC1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.8292236328125	2	544.831714	1087.64888	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.456	1	42.09	41.59	42.59	0.6339								0	0	0	0.56276	1	3644	3644		56.721	3.3696	1		+		34821	30320	23068	23078	39721	39721					0.10855738480108812
LSSTLTSK	8	Unmodified	_LSSTLTSK_					0	0	0		ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.5824890136719	2	418.739825	835.465098	0.10886	4.5585E-05	-0.84945	-0.0003557	-0.74058	-0.00031011	418.73912273444984	37.842	0.57384	38.364	38.138	38.711	0.52235					23	14	2	0	0	0	0.4196	1	3100	3100		11.511	0.64546	1	167800			34822	2594	23069	23079	39722	39722					0.04078389769233581
LSSTPSCHA	9	Unmodified	_LSSTPSCHA_					0	0	0		ENSG00000133619|ENST00000496259|KRBA1;nc|ENSG00000133619|A5PL33-3|KRBA1;nc|ENSG00000133619|A5PL33-2|KRBA1;nc|ENSG00000133619|A5PL33|KRBA1	ENSG00000133619|ENST00000496259|KRBA1	ENSG00000133619|ENST00000496259|KRBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7030334472656	2	451.70546	901.396366	-0.2964	-0.00013389	-3.0258	-0.0013668	-3.3222	-0.0015007	451.7038471316961	30.764	0.70891	30.717	30.422	31.131	-0.047064					31	18	2	0	0	0	0.35373	1	1698	1698		60.972	9.6365	1	53692			34823	3884	23070	23080	39723	39723					-0.05827597802135642
LSSVLLLLY	9	Unmodified	_LSSVLLLLY_					0	0	0		ENST00000273691.7_1_3:121720162-121720225:-|nuORF	ENST00000273691.7_1_3:121720162-121720225:-|nuORF	ENST00000273691.7_1_3:121720162-121720225:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.81988525390625	2	510.820618	1019.62668	0.72356	0.00036961	-1.7932	-0.00091601	-1.0696	-0.0005464	510.81978429305985	94.733	0.77902	95.153	94.808	95.587	0.41963					52	18	4	0	0	0	0.3636	1	11338	11338		60.294	7.9948	1	885090			34824	9580	23071	23081	39724	39724					0.11765558802335363
LSSVTVSF	8	Unmodified	_LSSVTVSF_					0	0	0			REV__ENST00000264025.7_1_11:119535043-119535469:-|nuORF	REV__ENST00000264025.7_1_11:119535043-119535469:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.22406005859375	2	420.229094	838.443634	-0.26172	-0.00010998	-2.7119	-0.0011396	-2.9737	-0.0012496	420.2278427718772	76.28	2.2676	76.231	74.595	76.863	-0.048271					136	69	3	0	0	0	0.82464	1	7459	7459		21.702	0	1	253020	+		34825	24460	23072	23082	39725	39725					0.017950047405292935
LSSVYCGLSLF	11	Unmodified	_LSSVYCGLSLF_					0	0	0			REV__nc|ENSG00000166377|O43861-2|ATP9B	REV__nc|ENSG00000166377|O43861-2|ATP9B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.8005981445312	2	594.8021	1187.58965	-0.19441	-0.00011564	-3.4977	-0.0020804	-3.6921	-0.0021961	594.8005789266958	80.772	0.61922	81.194	80.891	81.51	0.4215					54	14	5	0	0	0	0.31674	1	9275	9275		71.877	1.0613	1	1005600	+		34826	21286	23073	23083	39726	39726					0.0033551919425462984
LSSWTLVTL	9	Unmodified	_LSSWTLVTL_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	510.2880554199219	2	510.292225	1018.5699	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.715	1	55.715	55.215	56.215	0								0	0	0	0.35068	1	4743	4743		60.972	4.2509	1		+		34827	18606	23074	23084	39727	39727					0.061355112458159056
LSSYLKELSVP	11	Unmodified	_LSSYLKELSVP_					0	0	0			REV__ENST00000509911.2_1_9:37007519-37007720:+|nuORF	REV__ENST00000509911.2_1_9:37007519-37007720:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3457641601562	2	618.347729	1234.6809	-0.1645	-0.00010172	-2.661	-0.0016454	-2.8255	-0.0017472	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.64498	1	10026	10026		39.253	6.4404	1	511870	+		34828	27942	23075	23085	39728	39728					0.07295106163223863
LSTAGLRSACS	11	Unmodified	_LSTAGLRSACS_					0	0	0		ENST00000532986.1_1_11:62339151-62341470:-|nuORF	ENST00000532986.1_1_11:62339151-62341470:-|nuORF	ENST00000532986.1_1_11:62339151-62341470:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.273681640625	2	533.271498	1064.52844	0.40392	0.0002154	3.5069	0.0018701	3.9109	0.0020855	533.2739290751422	56.89	0.73003	56.862	56.625	57.355	-0.028664					38	22	3	0	0	0	0.62614	1	5239	5239		41.427	1.3684	1	396190			34829	13387	23076	23086	39729	39729					-0.0012399278518842038
LSTARTTP	8	Unmodified	_LSTARTTP_					0	0	0		ENSG00000215182|ENST00000621226|MUC5AC	ENSG00000215182|ENST00000621226|MUC5AC	ENSG00000215182|ENST00000621226|MUC5AC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.3054504394531	2	423.737617	845.460681	0.91304	0.00038689	-1.3215	-0.00055998	-0.40849	-0.00017309	423.7370382489554	23.356	0.21774	22.974	22.845	23.063	-0.38178					7	4	2	0	0	0	0.4196	1	1035	1035		25.574	0	1	16222			34830	8648	23077	23087	39730	39730					0.03176925346326698
LSTATCRLT	9	Carbamidomethyl (C)	_LSTATC(Carbamidomethyl (C))RLT_	LSTATC(1)RLT		LSTATC(49)RLT		0	1	0			REV__nc|ENSG00000198053|P78324-4|SIRPA	REV__nc|ENSG00000198053|P78324-4|SIRPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.7675476074219	2	511.768591	1021.52263	-0.093892	-4.8051E-05	-3.7207	-0.0019041	-3.8146	-0.0019522	511.7666852667124	30.917	0.35998	30.907	30.777	31.137	-0.010656					14	8	2	0	0	0	0.55097	1	1655	1655		49.442	12.995	1	34394	+		34831	23294	23078	23088	39731	39731	280				0.012729087031516428
LSTATCRLT	9	Carbamidomethyl (C)	_LSTATC(Carbamidomethyl (C))RLT_					0	1	0			REV__nc|ENSG00000198053|P78324-4|SIRPA	REV__nc|ENSG00000198053|P78324-4|SIRPA	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	511.768591	1021.52263	-1.707	-0.00087359	-1.4593	-0.00074684	-3.1663	-0.0016204	512.2698305009642	30.992	0.22774	30.992	30.888	31.116	0	0.012351	0.0022612	NaN	49.442	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37658	+		34832	23294	23078	23088			280				0.012729087031516428
LSTATCRLT	9	Carbamidomethyl (C)	_LSTATC(Carbamidomethyl (C))RLT_					0	1	0			REV__nc|ENSG00000198053|P78324-4|SIRPA	REV__nc|ENSG00000198053|P78324-4|SIRPA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	511.768591	1021.52263	0.69363	0.00035498	-3.5121	-0.0017974	-2.8185	-0.0014424	511.76630100731217	31.006	0.26	31.009	30.884	31.144	0.0037212	0.030177	0.00016015	NaN	49.442	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40381	+		34833	23294	23078	23088			280				0.012729087031516428
LSTDDPMQF	9	Unmodified	_LSTDDPMQF_					0	0	0		nc|ENSG00000116748|P23109-2|AMPD1;ENSG00000116748|ENST00000520113|AMPD1;ENST00000534047.5_1_11:10518329-10527428:+|nuORF;nc|ENSG00000133805|Q01432-6|AMPD3;ENSG00000133805|ENST00000396553|AMPD3;nc|ENSG00000133805|Q01432-5|AMPD3;nc|ENSG00000133805|Q01432-4|AMPD3	nc|ENSG00000116748|P23109-2|AMPD1;ENST00000534047.5_1_11:10518329-10527428:+|nuORF	nc|ENSG00000116748|P23109-2|AMPD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.2301635742188	2	527.231507	1052.44846	-1.2367	-0.00065204	-1.7674	-0.00093181	-3.0041	-0.0015838	527.2304997593297	90.048	0.90989	90.519	90.214	91.124	0.47068					39	23	2	0	0	0	0.35373	1	10692	10692		60.972	3.1607	1	1351700			34834	2944;3894	23079	23089	39732	39732					-0.07566479179035923
LSTGLVLH	8	Unmodified	_LSTGLVLH_					0	0	0		ENST00000396113.5_2_8:95957780-95970353:+|nuORF	ENST00000396113.5_2_8:95957780-95970353:+|nuORF	ENST00000396113.5_2_8:95957780-95970353:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2529296875	2	420.252903	838.491253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.22	1	112.19	111.69	112.69	-0.025414								0	0	0	0.29353	1	12396	12396		28.254	0	1				34835	11110	23080	23090	39733	39733					0.06554703731376321
LSTIENNNS	9	Unmodified	_LSTIENNNS_					0	0	0			REV__nc|ENSG00000162594|Q5VWK5-7|IL23R	REV__nc|ENSG00000162594|Q5VWK5-7|IL23R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	496.2374572753906	2	496.238178	990.461803	-1.1591	-0.00057517	1.339	0.00066446	0.17994	8.9292E-05	496.238618590653	30.86	0.93819	30.85	30.405	31.344	-0.010656					47	23	4	0	0	0	0.73802	1	1670	1670		37.812	3.639	1	242080	+		34836	20824	23081	23091	39734	39734					-0.033809050754143755
LSTIRWAVPLL	11	Unmodified	_LSTIRWAVPLL_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.892822265625	2	634.889898	1267.76524	1.4999	0.00095225	2.3399	0.0014856	3.8398	0.0024378	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.45916	1	11178	11178		54.776	7.119	1	68597000	+		34837	20542	23082	23092	39735	39735					0.14207101770671215
LSTLARKR	8	Unmodified	_LSTLARKR_					0	0	0		nc|ENSG00000141298|Q76I76-2|SSH2;ENST00000324677.11_1_17:28001125-28088295:-|nuORF	nc|ENSG00000141298|Q76I76-2|SSH2	nc|ENSG00000141298|Q76I76-2|SSH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28759765625	2	472.803626	943.592698	-0.91105	-0.00043075	0.56721	0.00026818	-0.34384	-0.00016257	472.8055394924148	94.976	0.28531	95.207	94.942	95.227	0.23103					8	6	2	0	0	0	0.4196	1	9700	9700		11.511	0	1	78697			34838	10064	23083	23093	39736	39736					0.11864575153947499
LSTLFLTT	8	Unmodified	_LSTLFLTT_					0	0	0			REV__ENST00000570646.5_1_16:4526085-4526253:+|nuORF	REV__ENST00000570646.5_1_16:4526085-4526253:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.2589111328125	2	448.260394	894.506234	0.65386	0.0002931	-3.5363	-0.0015852	-2.8825	-0.0012921	448.25866214707224	89.921	4.4379	90.073	86.786	91.224	0.1519					231	105	5	0	0	0	0.84341	1	9007	9007		24.203	1.1603	1	2709200	+		34839	28927	23084	23094	39737	39737					0.05476150808692637
LSTLGLVIMA	10	Unmodified	_LSTLGLVIMA_					0	0	0		ENSG00000237649|ENST00000428849|KIFC1	ENSG00000237649|ENST00000428849|KIFC1	ENSG00000237649|ENST00000428849|KIFC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.3056945800781	2	509.304278	1016.594	0.38214	0.00019463	2.5317	0.0012894	2.9139	0.001484	509.30545060509706	93	1.7659	93.046	92.369	94.135	0.045448					129	41	4	0	0	0	0.8608	1	9769	9769		34.173	1.3601	1	3009900			34840	8761	23085	23095	39738	39738					0.08637028407815706
LSTLGLVIMA	10	Unmodified	_LSTLGLVIMA_					0	0	0		ENSG00000237649|ENST00000428849|KIFC1	ENSG00000237649|ENST00000428849|KIFC1	ENSG00000237649|ENST00000428849|KIFC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.3057556152344	2	509.304278	1016.594	0.74223	0.00037802	2.3317	0.0011875	3.0739	0.0015656	509.305324720209	92.968	1.4156	93.127	92.667	94.082	0.15875					103	33	4	0	0	0	0.86589	1	9430	9430		29.15	2.4566	1	2131200			34841	8761	23085	23095	39739	39739					0.08637028407815706
LSTLSTFHVPL	11	Unmodified	_LSTLSTFHVPL_					0	0	0			REV__ENST00000572067.1_1_16:67916768-67917086:+|nuORF	REV__ENST00000572067.1_1_16:67916768-67917086:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.8977355957031	3	405.564168	1213.67067	1.5319	0.00062128	-0.097166	-3.9407E-05	1.4347	0.00058187	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.72918	1	5901	5901		29.551	11.718	1	245170	+		34842	28937	23086	23096	39740	39740					0.0723854322866373
LSTPIRRSA	9	Unmodified	_LSTPIRRSA_					0	0	0			REV__ENST00000510531.5_1_5:6644946-6645183:+|nuORF	REV__ENST00000510531.5_1_5:6644946-6645183:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.79803466796875	2	500.79854	999.582528	-0.83514	-0.00041824	-1.3028	-0.00065244	-2.1379	-0.0010707	500.7979469988337	94.638	1.5103	94.638	94.104	95.614	0					48	35	2	0	0	0	0.7932	1	9392	9392		20.947	0	1	183430	+		34843	27955	23087	23097	39741	39741					0.08271967428697735
LSTPPKIL	8	Unmodified	_LSTPPKIL_					0	0	0		ENST00000496906.1_1_9:35749376-35750743:+|nuORF;ENSG00000107185|ENST00000378078|RGP1	ENST00000496906.1_1_9:35749376-35750743:+|nuORF	ENST00000496906.1_1_9:35749376-35750743:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7799072265625	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.87479	1	3108	3108		30.504	0	1	1177900			34844	2333	23088	23098	39742	39742					0.10388447425293634
LSTPPKIL	8	Unmodified	_LSTPPKIL_					0	0	0		ENST00000496906.1_1_9:35749376-35750743:+|nuORF;ENSG00000107185|ENST00000378078|RGP1	ENST00000496906.1_1_9:35749376-35750743:+|nuORF	ENST00000496906.1_1_9:35749376-35750743:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7796325683594	2	434.778754	867.542954	-0.7455	-0.00032413	3.1434	0.0013667	2.3979	0.0010426	434.7799642778913	44.364	1.5041	44.814	44.322	45.826	0.45025					111	36	4	0	0	0	0.85277	1	4180	4180		25.45	0	1	4473900			34845	2333	23088	23098	39743	39743					0.10388447425293634
LSTRARRLQPR	11	Unmodified	_LSTRARRLQPR_					0	0	0		ENST00000302904.8_1_17:42294008-42298982:-|nuORF	ENST00000302904.8_1_17:42294008-42298982:-|nuORF	ENST00000302904.8_1_17:42294008-42298982:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9434509277344	3	451.944376	1352.8113	0.2172	9.8162E-05	-2.8737	-0.0012987	-2.6565	-0.0012006	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.78083	1	4598	4598		15.337	1.608	1	771970			34846	9825	23089	23099	39744	39744					0.14900559725447238
LSTRGYVNFV	10	Unmodified	_LSTRGYVNFV_					0	0	0		nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2;ENSG00000188559|ENST00000202677|RALGAPA2	nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	578.3102416992188	2	578.31148	1154.60841	0.66204	0.00038287	-2.1559	-0.0012468	-1.4939	-0.00086394	578.3100530437905	110.07	1.6087	110.19	110.03	111.64	0.11946					88	58	4	0	0	0	0.86718	1	11916	11916		27.882	2.3082	1	2568100			34847	7936	23090	23100	39745	39745					0.037288168803115695
LSTRILRESRL	11	Unmodified	_LSTRILRESRL_					0	0	0			REV__ENSG00000113645|ENST00000265293|WWC1	REV__ENSG00000113645|ENST00000265293|WWC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.608642578125	3	448.60877	1342.80448	-1.309	-0.00058724	2.7202	0.0012203	1.4112	0.00063306	448.60976401690687	76.777	1.1377	76.902	76.414	77.552	0.12485					110	49	3	0	0	0	0.77205	1	7204	7204		17.167	1.8293	1	879130	+		34848	18005	23091	23101	39746	39746					0.146792020542307
LSTSLVGY	8	Unmodified	_LSTSLVGY_					0	0	0		nc|ENSG00000005469|Q9UKG9-3|CROT;ENSG00000005469|ENST00000331536|CROT	nc|ENSG00000005469|Q9UKG9-3|CROT	nc|ENSG00000005469|Q9UKG9-3|CROT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2276611328125	2	420.229094	838.443634	-1.5729	-0.000661	-1.3827	-0.00058106	-2.9557	-0.0012421	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.86791	1	7513	7513		28.254	0.37203	1	634680			34849	684	23092	23102	39747	39747					0.017950047405292935
LSTSPPRA	8	Unmodified	_LSTSPPRA_					0	0	0			REV__ENSG00000108510|ENST00000397786|MED13	REV__ENSG00000108510|ENST00000397786|MED13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.57928466796875	2	414.732335	827.450116	-0.0088182	-3.6572E-06	0.32383	0.0001343	0.31501	0.00013064	414.7349323672989	28.358	0.24644	28.261	28.094	28.34	-0.096945					7	5	2	0	0	0	0.4196	1	1691	1691		32.812	0	1	15573	+		34850	17715	23093	23103	39748	39748					0.029489426918985373
LSTVQLAARIH	11	Unmodified	_LSTVQLAARIH_					0	0	0		ENSG00000066735|ENST00000423312|KIF26A	ENSG00000066735|ENST00000423312|KIF26A	ENSG00000066735|ENST00000423312|KIF26A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.5748596191406	3	403.575178	1207.70371	0.45838	0.00018499	-1.3766	-0.00055558	-0.91825	-0.00037058	403.5745157078723	82.548	1.6567	82.482	81.51	83.166	-0.066185					95	38	3	0	0	0	0.6396	1	8406	8406		39.873	4.7211	1	406480			34851	1165	23094	23104	39749	39749					0.10816170071370834
LSTVQLAARIH	11	Unmodified	_LSTVQLAARIH_					0	0	0		ENSG00000066735|ENST00000423312|KIF26A	ENSG00000066735|ENST00000423312|KIF26A	ENSG00000066735|ENST00000423312|KIF26A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.574462890625	3	403.575178	1207.70371	0.56211	0.00022685	-1.4705	-0.00059345	-0.90837	-0.00036659	403.57452270455985	81.745	1.4637	81.891	80.868	82.331	0.14551					81	33	4	0	0	0	0.71803	1	7753	7753		28.577	0.49524	1	2051300			34852	1165	23094	23104	39750	39750					0.10816170071370834
LSTVQLAARIH	11	Unmodified	_LSTVQLAARIH_					0	0	0		ENSG00000066735|ENST00000423312|KIF26A	ENSG00000066735|ENST00000423312|KIF26A	ENSG00000066735|ENST00000423312|KIF26A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5751037597656	3	403.575178	1207.70371	0.57405	0.00023167	-1.6768	-0.00067673	-1.1028	-0.00044506	403.57443061209773	82.843	3.1803	82.99	82.289	85.469	0.14694					168	73	3	0	0	0	0.61824	1	8057	8057		42.338	4.8299	1	1495300			34853	1165	23094	23104	39751	39751					0.10816170071370834
LSTYRTACKL	10	Unmodified	_LSTYRTACKL_					0	0	0		ENSG00000134769|ENST00000444659|DTNA;nc|ENSG00000134769|Q9Y4J8|DTNA;nc|ENSG00000134769|Q9Y4J8-4|DTNA;nc|ENSG00000134769|Q9Y4J8-15|DTNA;nc|ENSG00000134769|Q9Y4J8-14|DTNA;nc|ENSG00000134769|Q9Y4J8-2|DTNA;nc|ENSG00000134769|Q9Y4J8-13|DTNA;nc|ENSG00000134769|Q9Y4J8-3|DTNA;ENSG00000138101|ENST00000406818|DTNB;nc|ENSG00000138101|O60941-7|DTNB;nc|ENSG00000138101|O60941-4|DTNB;ENST00000493538.5_1_2:25803688-25875529:-|nuORF;ENST00000472690.5_1_2:25819066-25872751:-|nuORF;nc|ENSG00000138101|O60941-5|DTNB;nc|ENSG00000138101|O60941-3|DTNB;nc|ENSG00000134769|Q9Y4J8-5|DTNA;nc|ENSG00000134769|Q9Y4J8-16|DTNA;nc|ENSG00000134769|Q9Y4J8-7|DTNA;nc|ENSG00000134769|Q9Y4J8-9|DTNA;nc|ENSG00000134769|Q9Y4J8-12|DTNA;nc|ENSG00000138101|O60941-2|DTNB	ENSG00000134769|ENST00000444659|DTNA	ENSG00000134769|ENST00000444659|DTNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.3174438476562	2	578.313166	1154.61178	-1.4027	-0.0008112	-0.92451	-0.00053465	-2.3272	-0.0013459	578.3122696398594	56.678	0.69374	57.075	56.72	57.414	0.39672					53	15	5	0	0	0	0.47091	1	5848	5848		58.23	0	1	1103600			34854	3957	23095	23105	39752	39752					0.04065743662681598
LSVAHRGSL	9	Unmodified	_LSVAHRGSL_					0	0	0		ENSG00000103742|ENST00000352385|IGDCC4	ENSG00000103742|ENST00000352385|IGDCC4	ENSG00000103742|ENST00000352385|IGDCC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.2720642089844	2	470.272158	938.529764	1.675	0.00078769	-1.7547	-0.00082518	-0.079724	-3.7492E-05	470.2713101405092	92.346	2.9868	92.282	91.318	94.305	-0.06414					149	70	4	0	0	0	0.76764	1	9780	9780		34.173	0.65696	1	1961400			34855	2100	23096	23106	39753	39753					0.05804009365908769
LSVAKFLNTP	10	Unmodified	_LSVAKFLNTP_					0	0	0			REV__ENSG00000121871|ENST00000475390|SLITRK3	REV__ENSG00000121871|ENST00000475390|SLITRK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3170776367188	2	545.318774	1088.623	0.15577	8.4944E-05	-3.7365	-0.0020376	-3.5808	-0.0019527	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.69342	1	9330	9330		45.022	5.7694	1	17220000	+		34856	15802	23097	23107	39754	39754					0.08222889028479585
LSVALDKP	8	Unmodified	_LSVALDKP_					0	0	0		ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.75128173828125	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.88185	1	7113	7113		32.812	0.85756	1	423780			34857	8422	23098	23108	39755	39755					0.06383284011519663
LSVAPRRWIP	10	Unmodified	_LSVAPRRWIP_					0	0	0			REV__ENST00000508276.1_1_4:2933511-2933652:-|nuORF	REV__ENST00000508276.1_1_4:2933511-2933652:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8560791015625	2	597.858932	1193.70331	-0.56163	-0.00033577	-3.8314	-0.0022906	-4.393	-0.0026264	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.80179	1	9978	9978		39.253	1.4413	1	6282800	+		34858	27922	23099	23109	39756	39756					0.11420795142180395
LSVARHRPAL	10	Unmodified	_LSVARHRPAL_					0	0	0		ENST00000339276.5_1_1:27190446-27190644:+|nuORF	ENST00000339276.5_1_1:27190446-27190644:+|nuORF	ENST00000339276.5_1_1:27190446-27190644:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3404541015625	2	560.340907	1118.66726	-1.1297	-0.00063301	-0.12552	-7.0334E-05	-1.2552	-0.00070335	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.86718	1	11287	11287		27.882	0	1	84412000			34859	10216	23100	23110	39757	39757					0.11267337965296065
LSVAYGKPKSA	11	Unmodified	_LSVAYGKPKSA_					0	0	0			REV__ENSG00000185112|ENST00000329759|FAM43A	REV__ENSG00000185112|ENST00000329759|FAM43A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8201293945312	2	560.821681	1119.62881	-1.1548	-0.00064764	-2.2174	-0.0012436	-3.3722	-0.0018912	560.8203192234314	92.561	2.9962	92.631	91.312	94.308	0.06987					218	70	4	0	0	0	0.68532	1	9541	9541		33.922	1.1092	1	775670	+		34860	22738	23101	23111	39758	39758					0.07377987540144204
LSVAYGKPKSA	11	Unmodified	_LSVAYGKPKSA_					0	0	0			REV__ENSG00000185112|ENST00000329759|FAM43A	REV__ENSG00000185112|ENST00000329759|FAM43A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8199462890625	2	560.821681	1119.62881	-1.4169	-0.00079462	-1.874	-0.001051	-3.2909	-0.0018456	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.62614	1	9246	9246		41.427	2.673	1	758020	+		34861	22738	23101	23111	39759	39759					0.07377987540144204
LSVDAKKH	8	Unmodified	_LSVDAKKH_					0	0	0			REV__nc|ENSG00000104755|Q99965-2|ADAM2	REV__nc|ENSG00000104755|Q99965-2|ADAM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2607727050781	2	449.261259	896.507966	-0.10987	-4.936E-05	-1.2586	-0.00056544	-1.3685	-0.0006148	449.26053823357574	68.09	1.1232	68.638	68.16	69.283	0.54819					61	26	4	0	0	0	0.85277	1	7527	7527		25.45	2.4077	1	1909000	+		34862	17470	23102	23112	39760	39760					0.055572046173210765
LSVERKLVT	9	Unmodified	_LSVERKLVT_					0	0	0			REV__ENST00000398505.7_1_21:43413696-43413789:-|nuORF	REV__ENST00000398505.7_1_21:43413696-43413789:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.249267578125	2	522.824224	1043.63389	-0.3173	-0.00016589	0.68047	0.00035577	0.36317	0.00018987	522.8244088444383	46.737	0.37711	47.208	47.099	47.476	0.47139					12	8	2	0	0	0	0.20789	1	4437	4437		45.972	1.8554	1	644770	+		34863	26208	23103	23113	39761	39761					0.11382291402765077
LSVHAYAS	8	Unmodified	_LSVHAYAS_					0	0	0		ENSG00000163840|ENST00000296161|DTX3L	ENSG00000163840|ENST00000296161|DTX3L	ENSG00000163840|ENST00000296161|DTX3L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2187194824219	2	424.21906	846.423567	1.9084	0.00080956	-2.9079	-0.0012336	-0.99957	-0.00042404	424.21773029200483	100.79	1.277	101.09	100.26	101.54	0.2999					57	33	3	0	0	0	0.88915	1	12216	12216		35.201	1.6851	1	900380			34864	5872	23104	23114	39762	39762					-0.005787461994373189
LSVKQVRN	8	Unmodified	_LSVKQVRN_					0	0	0		nc|ENSG00000147874|Q7Z4H7-3|HAUS6;ENSG00000147874|ENST00000380502|HAUS6;nc|ENSG00000147874|Q7Z4H7-2|HAUS6	nc|ENSG00000147874|Q7Z4H7-3|HAUS6	nc|ENSG00000147874|Q7Z4H7-3|HAUS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2873229980469	2	472.287808	942.561064	-0.10777	-5.0899E-05	0.78283	0.00036972	0.67506	0.00031882	472.28822632697705	99.434	2.1055	99.484	98.705	100.81	0.049828					105	48	3	0	0	0	0.86677	1	10573	10573		27.882	2.4321	1	555450			34865	4926	23105	23115	39763	39763					0.0874858239999412
LSVKQVRN	8	Unmodified	_LSVKQVRN_					0	0	0		nc|ENSG00000147874|Q7Z4H7-3|HAUS6;ENSG00000147874|ENST00000380502|HAUS6;nc|ENSG00000147874|Q7Z4H7-2|HAUS6	nc|ENSG00000147874|Q7Z4H7-3|HAUS6	nc|ENSG00000147874|Q7Z4H7-3|HAUS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2872009277344	2	472.287808	942.561064	0.76193	0.00035985	-0.26462	-0.00012498	0.49731	0.00023487	472.28771256093336	99.111	1.7073	99.267	98.769	100.48	0.15659					91	39	3	0	0	0	0.86677	1	10361	10361		27.882	2.4321	1	525470			34866	4926	23105	23115	39764	39764					0.0874858239999412
LSVLDVGCIT	10	Unmodified	_LSVLDVGCIT_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.2745361328125	2	510.275718	1018.53688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.358	1	55.351	54.851	55.851	-0.0077095								0	0	0	0.45132	1	4927	4927		47.657	3.5405	1				34867	8677	23106	23116	39765	39765					0.028355611314509588
LSVLLYGQP	9	Unmodified	_LSVLLYGQP_					0	0	0		nc|ENSG00000110171|O75382-4|TRIM3;nc|ENSG00000110171|O75382-3|TRIM3;nc|ENSG00000110171|O75382-2|TRIM3;ENSG00000110171|ENST00000345851|TRIM3	nc|ENSG00000110171|O75382-4|TRIM3	nc|ENSG00000110171|O75382-4|TRIM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	495.32391357421875	2	495.286943	988.559333	0.50869	0.00025195	-1.5106	-0.0007482	-1.002	-0.00049625	495.28593815824195	68.677	0.4753	68.805	68.592	69.067	0.12838					28	17	2	0	0	0	0.58151	1	6207	6207		47.916	0.25827	1	120640			34868	2514	23107	23117	39766	39766					0.0645952859136969
LSVLLYGQP	9	Unmodified	_LSVLLYGQP_					0	0	0		nc|ENSG00000110171|O75382-4|TRIM3;nc|ENSG00000110171|O75382-3|TRIM3;nc|ENSG00000110171|O75382-2|TRIM3;ENSG00000110171|ENST00000345851|TRIM3	nc|ENSG00000110171|O75382-4|TRIM3	nc|ENSG00000110171|O75382-4|TRIM3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	495.286943	988.559333	-0.95112	-0.00047108	-0.50918	-0.00025219	-1.4603	-0.00072327	495.2865824933829	68.802	0.5366	68.868	68.695	69.231	0.065514	0.077389	0.00038686	NaN	47.916	40	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123900			34869	2514	23107	23117							0.0645952859136969
LSVPVSAPP	9	Unmodified	_LSVPVSAPP_					0	0	0		ENSG00000085185|ENST00000540052|BCORL1;nc|ENSG00000085185|Q5H9F3-1|BCORL1;nc|ENSG00000085185|Q5H9F3-4|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7528991699219	2	433.752736	865.490919	-0.89842	-0.00038969	1.1465	0.00049731	0.2481	0.00010762	433.7530751140989	61.556	3.4273	61.944	61.394	64.821	0.38845					196	83	3	0	0	0	0.043636	1	6598	6598		110.34	14.147	1	960390			34870	1527	23108	23118	39767	39767					0.05279284011521668
LSVPVSAPP	9	Unmodified	_LSVPVSAPP_					0	0	0		ENSG00000085185|ENST00000540052|BCORL1;nc|ENSG00000085185|Q5H9F3-1|BCORL1;nc|ENSG00000085185|Q5H9F3-4|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.7528381347656	2	433.752736	865.490919	0.16558	7.1822E-05	0.12045	5.2244E-05	0.28603	0.00012407	433.75263120517457	61.559	3.4925	62.113	61.36	64.852	0.55386					226	86	4	0	0	0	0.14115	4	6632	6632;6669;6682;6696		85.359	16.573	1	1110200			34871	1527	23108	23118	39768;39769;39770;39771	39768					0.05279284011521668
LSVRKSKSGT	10	Unmodified	_LSVRKSKSGT_					0	0	0			REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.81689453125	2	531.81693	1061.61931	1.595	0.00084823	-1.7275	-0.00091871	-0.13254	-7.0485E-05	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.8486	1	9012	9012		18.262	0	1	1345000	+		34872	16226	23109	23119	39772	39772					0.09096219254638527
LSVRKSKSGT	10	Unmodified	_LSVRKSKSGT_					0	0	0			REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8167724609375	2	531.81693	1061.61931	1.0296	0.00054754	-1.136	-0.00060416	-0.10647	-5.6623E-05	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.86587	1	8768	8768		29.17	2.374	1	1241100	+		34873	16226	23109	23119	39773	39773					0.09096219254638527
LSVRKSKSGT	10	Unmodified	_LSVRKSKSGT_					0	0	0			REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8167114257812	2	531.81693	1061.61931	-0.04786	-2.5453E-05	-0.21771	-0.00011578	-0.26557	-0.00014123	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.86587	1	8652	8652		29.17	0.020503	1	4916300	+		34874	16226	23109	23119	39774	39774					0.09096219254638527
LSVRKSKSGT	10	Unmodified	_LSVRKSKSGT_					0	0	0			REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8165893554688	2	531.81693	1061.61931	-1.4587	-0.00077575	1.2999	0.00069131	-0.15877	-8.4438E-05	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.82886	2	8352	8352;8519		37.812	1.0342	1	1159800	+		34875	16226	23109	23119	39775;39776	39775					0.09096219254638527
LSVRKSKSGT	10	Unmodified	_LSVRKSKSGT_					0	0	0			REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8164672851562	2	531.81693	1061.61931	1.0704	0.00056928	-1.0589	-0.00056316	0.011518	6.1253E-06	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.86106	2	10514	10514;10538		33.922	3.418	1	4490200	+		34876	16226	23109	23119	39777;39778	39777					0.09096219254638527
LSVRLYYQKL	10	Unmodified	_LSVRLYYQKL_					0	0	0			REV__ENST00000427628.5_1_12:46123676-46149750:+|nuORF	REV__ENST00000427628.5_1_12:46123676-46149750:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8828125	2	641.87953	1281.74451	1.5937	0.0010229	2.8364	0.0018207	4.4301	0.0028436	641.8811997248309	95.576	2.5829	95.807	94.242	96.825	0.23103					208	61	4	0	0	0	0.86272	1	9906	9906		24.519	2.5593	1	2238900	+		34877	26569	23110	23120	39779	39779					0.11490511390979918
LSVSLIFP	8	Unmodified	_LSVSLIFP_					0	0	0		ENST00000508110.5_1_4:187347442-187347706:-|nuORF	ENST00000508110.5_1_4:187347442-187347706:-|nuORF	ENST00000508110.5_1_4:187347442-187347706:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2632141113281	2	438.265479	874.516405	-1.9277	-0.00084486	-2.8186	-0.0012353	-4.7463	-0.0020801	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.80963	1	2303	2303		15.636	0	1	3507500			34878	12971	23111	23121	39780	39780					0.07412758533951092
LSVTEPIEDE	10	Unmodified	_LSVTEPIEDE_					0	0	0			REV__ENSG00000114023|ENST00000477892|FAM162A	REV__ENSG00000114023|ENST00000477892|FAM162A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.2527465820312	2	566.274426	1130.5343	0.51137	0.00028958	-3.6119	-0.0020454	-3.1006	-0.0017558	566.2719947603126	84.759	0.83289	85.206	84.792	85.624	0.44736					36	20	3	0	0	0	0.37624	1	9972	9972		26.693	0	1	247070	+		34879	18026	23112	23122	39781	39781					-0.025746157925141233
LSVTRRAA	8	Unmodified	_LSVTRRAA_					0	0	0		ENST00000273582.9_2_3:197432012-197444915:-|nuORF	ENST00000273582.9_2_3:197432012-197444915:-|nuORF	ENST00000273582.9_2_3:197432012-197444915:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.7679443359375	2	437.266876	872.519199	1.7622	0.00077054	-4.3406	-0.001898	-2.5785	-0.0011275	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.85277	1	1031	1031		25.45	1.2474	1	1079000			34880	9579	23113	23123	39782	39782					0.07784026711453862
LSWSTYGKINA	11	Unmodified	_LSWSTYGKINA_					0	0	0			REV__nc|ENSG00000188501|Q6UWM7-2|LCTL	REV__nc|ENSG00000188501|Q6UWM7-2|LCTL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	620.3184814453125	2	620.322045	1238.62954	0.033353	2.069E-05	-3.9018	-0.0024204	-3.8684	-0.0023997	620.3195551884588	44.368	0.51524	44.345	44.097	44.612	-0.023079					22	11	2	0	0	0	0.55601	1	3435	3435		47.96	8.7067	1	105460	+		34881	23006	23114	23124	39783	39783					0.01976782189194637
LSWSTYGKINA	11	Unmodified	_LSWSTYGKINA_					0	0	0			REV__nc|ENSG00000188501|Q6UWM7-2|LCTL	REV__nc|ENSG00000188501|Q6UWM7-2|LCTL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	620.322045	1238.62954	-0.79328	-0.00049209	-3.5046	-0.002174	-4.2979	-0.0026661	620.3198824244226	44.267	0.45589	44.234	44.031	44.487	-0.03347	-0.044164	0.00026092	NaN	47.96	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153860	+		34882	23006	23114	23124							0.01976782189194637
LSWSTYGKINA	11	Unmodified	_LSWSTYGKINA_					0	0	0			REV__nc|ENSG00000188501|Q6UWM7-2|LCTL	REV__nc|ENSG00000188501|Q6UWM7-2|LCTL	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	620.322045	1238.62954	-0.74003	-0.00045906	-3.6987	-0.0022944	-4.4387	-0.0027534	620.3196682763778	44.257	0.53295	44.255	44.008	44.541	-0.002449	-0.023143	2.0164E-05	NaN	47.96	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153660	+		34883	23006	23114	23124							0.01976782189194637
LSYFNGKI	8	Unmodified	_LSYFNGKI_					0	0	0			REV__L1ME1_dup24186|chr13:95814720-95815679:+|1.0321866654458889|0.4743441469615944|1.12|63.0|29|3|sense	REV__L1ME1_dup24186|chr13:95814720-95815679:+|1.0321866654458889|0.4743441469615944|1.12|63.0|29|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2555847167969	2	471.258185	940.501818	-0.96243	-0.00045355	-3.5686	-0.0016817	-4.531	-0.0021353	471.2564956140925	29.771	2.7125	29.799	28.794	31.507	0.028618					148	61	5	0	0	0	0.91472	1	1982	1982		44.117	3.3386	1	7198000	+		34884	29534	23115	23125	39784	39784					0.02918686385817182
LSYGDQFPE	9	Unmodified	_LSYGDQFPE_					0	0	0			REV__ENSG00000164543|ENST00000319357|STK17A	REV__ENSG00000164543|ENST00000319357|STK17A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.2374267578125	2	528.237647	1054.46074	0.0061538	3.2507E-06	0.14267	7.5365E-05	0.14883	7.8616E-05	528.2378138616386	70.37	0.79037	70.917	70.617	71.407	0.54694					37	19	2	0	0	0	0.18601	1	7835	7835		76.774	7.9873	1	703530	+		34885	21090	23116	23126	39785	39785					-0.06431119444323485
LSYKIGGVNI	10	Unmodified	_LSYKIGGVNI_					0	0	0			REV__ENSG00000026559|ENST00000371571|KCNG1	REV__ENSG00000026559|ENST00000371571|KCNG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.31396484375	2	532.310949	1062.60735	0.92373	0.00049171	-4.1783	-0.0022242	-3.2546	-0.0017324	532.3087541715864	80.457	1.3153	80.397	80.077	81.392	-0.059692					61	36	2	0	0	0	0.86471	1	8170	8170		30.318	0	1	86337	+		34886	16260	23117	23127	39786	39786					0.0785460251142922
LSYKIGGVNI	10	Unmodified	_LSYKIGGVNI_					0	0	0			REV__ENSG00000026559|ENST00000371571|KCNG1	REV__ENSG00000026559|ENST00000371571|KCNG1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	532.310949	1062.60735	0.92373	0.00049171	-4.1783	-0.0022242	-3.2546	-0.0017324	532.3087541715864	80.457	1.3153	80.397	80.077	81.392	-0.059692	-0.09355	-0.00014706	NaN	30.318	61	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86337	+		34887	16260	23117	23127							0.0785460251142922
LSYKIGGVNI	10	Unmodified	_LSYKIGGVNI_					0	0	0			REV__ENSG00000026559|ENST00000371571|KCNG1	REV__ENSG00000026559|ENST00000371571|KCNG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	532.310949	1062.60735	0.67938	0.00036164	-4.4859	-0.0023879	-3.8065	-0.0020262	532.3086308941649	80.373	1.9314	80.428	80.096	82.028	0.055916	-0.062612	-0.0004745	NaN	30.318	70	48	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77147	+		34888	16260	23117	23127							0.0785460251142922
LSYKIGGVNI	10	Unmodified	_LSYKIGGVNI_					0	0	0			REV__ENSG00000026559|ENST00000371571|KCNG1	REV__ENSG00000026559|ENST00000371571|KCNG1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	532.310949	1062.60735	-0.057793	-3.0764E-05	-3.0657	-0.0016319	-3.1235	-0.0016627	532.3094040756089	80.212	1.416	80.349	80.061	81.477	0.13702	-0.14163	0.0010375	NaN	30.318	54	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71796	+		34889	16260	23117	23127							0.0785460251142922
LSYKIGGVNI	10	Unmodified	_LSYKIGGVNI_					0	0	0			REV__ENSG00000026559|ENST00000371571|KCNG1	REV__ENSG00000026559|ENST00000371571|KCNG1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	532.310949	1062.60735	-1.2587	-0.00067002	-3.0869	-0.0016432	-4.3456	-0.0023132	532.3099884721682	80.684	1.0789	80.789	80.568	81.647	0.10526	0.29779	0.0010149	NaN	30.318	39	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63379	+		34890	16260	23117	23127							0.0785460251142922
LSYPAGREVG	10	Unmodified	_LSYPAGREVG_					0	0	0		ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-11|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2;nc|ENSG00000137501|Q9HCH5-12|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.773681640625	2	524.774731	1047.53491	0.41976	0.00022028	-0.59093	-0.00031011	-0.17117	-8.9827E-05	524.7743447386226	17.432	0.37431	16.821	16.659	17.034	-0.6107					16	8	3	0	0	0	0.60985	1	269	269		49.536	0.094497	1	338640			34891	4207	23118	23128	39787	39787					0.013042684378660852
LSYQHLGPIQ	10	Unmodified	_LSYQHLGPIQ_					0	0	0		ENST00000566515.5_1_15:43486293-43487036:+|nuORF	ENST00000566515.5_1_15:43486293-43487036:+|nuORF	ENST00000566515.5_1_15:43486293-43487036:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.3107299804688	2	578.31148	1154.60841	-1.4027	-0.0008112	1.9899	0.0011508	0.58715	0.00033956	578.3122696398594	56.678	0.69374	57.075	56.72	57.414	0.39672					53	15	5	0	0	0	0.44803	1	5872	5872		60.118	12.461	1	1103600			34892	13934	23119	23129	39788	39788					0.03728816880334307
LSYQHLGPIQ	10	Unmodified	_LSYQHLGPIQ_					0	0	0		ENST00000566515.5_1_15:43486293-43487036:+|nuORF	ENST00000566515.5_1_15:43486293-43487036:+|nuORF	ENST00000566515.5_1_15:43486293-43487036:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.31201171875	2	578.31148	1154.60841	-0.28499	-0.00016481	0.39288	0.00022721	0.1079	6.2397E-05	578.3115305857085	56.498	0.8188	57.058	56.746	57.564	0.55954					58	18	5	0	0	0	0.44803	1	5854	5854		60.118	17.254	1	1217800			34893	13934	23119	23129	39789	39789					0.03728816880334307
LSYYQARLL	9	Unmodified	_LSYYQARLL_					0	0	0		nc|ENSG00000170959|M0R2J8|DCDC1;chr11:30915711-30916870|14|14.5|0.66|4.46|-|ENST00000597505|DCDC1,DCDC1;chr11:30911420-30915511|13|14.38|0.7|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30909116-30911327|13|15.38|0.76|4.34|-|ENST00000597505|DCDC1,DCDC1;chr11:30905164-30906540|21|14.05|0.72|4.28|-|ENST00000597505|DCDC1,DCDC1;chr11:30903683-30904961|18|18.22|0.57|5.0|-|ENST00000597505|DCDC1,DCDC1;chr11:30899642-30900346|23|15.83|0.82|4.27|-|ENST00000597505|DCDC1,DCDC1;chr11:30894384-30899541|18|19.5|0.94|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30892997-30894248|22|18.0|0.9|4.32|-|ENST00000597505|DCDC1,DCDC1;ENSG00000170959|ENST00000684477|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.8211669921875	2	563.816399	1125.61824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.399	1	57.387	56.887	57.887	-0.012203								0	0	0	0.30416	1	5185	5185		29.15	2.3535	1				34894	100	23120	23130	39790	39790					0.060460048857066795
LTAAIPPE	8	Unmodified	_LTAAIPPE_					0	0	0		nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-4|IMMT;ENSG00000132305|ENST00000410111|IMMT	nc|ENSG00000132305|Q16891-3|IMMT	nc|ENSG00000132305|Q16891-3|IMMT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7850646972656	2	406.231636	810.448719	0.17759	7.2144E-05	1.7759	0.00072141	1.9534	0.00079355	406.2323288270765	30.062	0.53221	30.087	29.882	30.414	0.025011					18	12	2	0	0	0	0.4196	1	1535	1535		23.042	0	1	21174			34895	3778	23121	23131	39791	39791					0.035913086031428065
LTAALVLRH	9	Unmodified	_LTAALVLRH_					0	0	0		ENSG00000177189|ENST00000379565|RPS6KA3	ENSG00000177189|ENST00000379565|RPS6KA3	ENSG00000177189|ENST00000379565|RPS6KA3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.3117980957031	2	497.313826	992.613099	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.68	1	115.68	115.18	116.18	0								0	0	0	0.33676	1	11886	11886		18.324	2.6826	1				34896	7125	23122	23132	39792	39792					0.11649745813747359
LTAASNQC	8	Unmodified	_LTAASNQC_					0	0	0			REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|31|2|sense	REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|31|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.1886291503906	2	404.186903	806.359253	-0.10834	-4.3788E-05	3.9623	0.0016015	3.8539	0.0015577	404.188371742509	83.931	1.3962	84.387	83.767	85.163	0.45555					68	33	3	0	0	0	0.86677	1	9776	9776		27.882	2.4321	1	1029500	+		34897	29522	23123	23133	39793	39793					-0.051672693478849396
LTADNLVL	8	Unmodified	_LTADNLVL_					0	0	0		ENST00000537646.5_1_12:7074850-7076486:-|nuORF;ENST00000546111.5_1_12:7074850-7079788:-|nuORF;nc|ENSG00000215021|Q99623-2|PHB2;ENSG00000215021|ENST00000535923|PHB2	ENST00000537646.5_1_12:7074850-7076486:-|nuORF	ENST00000537646.5_1_12:7074850-7076486:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.75042724609375	2	429.750193	857.485833	-0.15763	-6.7743E-05	-0.95449	-0.00041019	-1.1121	-0.00047794	429.7496181624476	40.277	2.7409	40.229	39.975	42.716	-0.04789					188	88	4	0	0	0	0.90983	1	2568	2568		42.396	1.618	1	4300300			34898	8644	23124	23134	39794	39794					0.05138980148910832
LTADSKLH	8	Unmodified	_LTADSKLH_					0	0	0		ENST00000518913.5_1_8:22034120-22058713:+|nuORF;nc|ENSG00000168487|P13497-5|BMP1;nc|ENSG00000168487|P13497-2|BMP1;ENST00000354870.5_1_8:22035226-22069238:+|nuORF;nc|ENSG00000168487|P13497-6|BMP1;ENST00000520982.5_1_8:22034120-22069238:+|nuORF;ENSG00000168487|ENST00000306385|BMP1	ENST00000518913.5_1_8:22034120-22058713:+|nuORF	ENST00000518913.5_1_8:22034120-22058713:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7442932128906	2	442.745442	883.476331	0.78435	0.00034727	-2.1089	-0.00093371	-1.3246	-0.00058645	442.7444248853172	92.688	1.1771	93.135	92.689	93.866	0.44661					49	27	2	0	0	0	0.93293	1	11037	11037		51.335	4.569	1	319190			34899	6404	23125	23135	39795	39795					0.02993211863383749
LTADSKLH	8	Unmodified	_LTADSKLH_					0	0	0		ENST00000518913.5_1_8:22034120-22058713:+|nuORF;nc|ENSG00000168487|P13497-5|BMP1;nc|ENSG00000168487|P13497-2|BMP1;ENST00000354870.5_1_8:22035226-22069238:+|nuORF;nc|ENSG00000168487|P13497-6|BMP1;ENST00000520982.5_1_8:22034120-22069238:+|nuORF;ENSG00000168487|ENST00000306385|BMP1	ENST00000518913.5_1_8:22034120-22058713:+|nuORF	ENST00000518913.5_1_8:22034120-22058713:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	442.745442	883.476331	0.67289	0.00029792	-1.3596	-0.00060198	-0.68676	-0.00030406	442.74449738306186	92.821	0.65301	92.98	92.751	93.404	0.15875	-0.12181	5.03E-05	NaN	51.335	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124890			34900	6404	23125	23135							0.02993211863383749
LTADSKLH	8	Unmodified	_LTADSKLH_					0	0	0		ENST00000518913.5_1_8:22034120-22058713:+|nuORF;nc|ENSG00000168487|P13497-5|BMP1;nc|ENSG00000168487|P13497-2|BMP1;ENST00000354870.5_1_8:22035226-22069238:+|nuORF;nc|ENSG00000168487|P13497-6|BMP1;ENST00000520982.5_1_8:22034120-22069238:+|nuORF;ENSG00000168487|ENST00000306385|BMP1	ENST00000518913.5_1_8:22034120-22058713:+|nuORF	ENST00000518913.5_1_8:22034120-22058713:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	442.745442	883.476331	-0.31401	-0.00013903	-0.88335	-0.0003911	-1.1974	-0.00053013	442.74490716641014	92.74	1.3455	93.19	92.732	94.077	0.44988	0.088723	0.00047206	NaN	51.335	54	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	330770			34901	6404	23125	23135							0.02993211863383749
LTAEVLGII	9	Unmodified	_LTAEVLGII_					0	0	0		ENSG00000183542|ENST00000309384|KLRC4;ENSG00000205809|ENST00000381902|KLRC2;ENSG00000205810|ENST00000396439|KLRC3;nc|ENSG00000205810|Q07444-2|KLRC3	ENSG00000183542|ENST00000309384|KLRC4	ENSG00000183542|ENST00000309384|KLRC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7906799316406	2	464.789318	927.564084	-1.14	-0.00052988	4.1432	0.0019257	3.0031	0.0013958	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.67235	1	1794	1794		42.474	1.9018	1	286820			34902	7539	23127	23136	39796	39796					0.09740412734140591
LTAGRVSRS	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LTAGRVSRS_					1	0	0		ENST00000156825.5_1_19:1577617-1577782:-|nuORF	ENST00000156825.5_1_19:1577617-1577782:-|nuORF	ENST00000156825.5_1_19:1577617-1577782:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7803955078125	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.51592	1	8448	8448		51.193	10.415	1	569520			34903	9079	23128	23137	39797	39797					0.05187090532001548
LTAGSLVF	8	Unmodified	_LTAGSLVF_					0	0	0		ENSG00000075035|ENST00000547525|WSCD2;nc|ENSG00000075035|Q2TBF2-2|WSCD2	REV__ENSG00000237172|ENST00000449549|B3GNT9	REV__ENSG00000237172|ENST00000449549|B3GNT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2328186035156	2	404.234179	806.453805	-0.18723	-7.5686E-05	-2.7376	-0.0011067	-2.9249	-0.0011823	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.86791	1	8523	8523		28.254	0	1	4185000	+		34904	23794	23129	23138	39798	39798					0.04283612465758324
LTAGSLVF	8	Unmodified	_LTAGSLVF_					0	0	0		ENSG00000075035|ENST00000547525|WSCD2;nc|ENSG00000075035|Q2TBF2-2|WSCD2	REV__ENSG00000237172|ENST00000449549|B3GNT9	REV__ENSG00000237172|ENST00000449549|B3GNT9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.2328186035156	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.86791	1	8312	8312		28.254	0	1	4227600	+		34905	23794	23129	23138	39799	39799					0.04283612465758324
LTALAVGVGV	10	Unmodified	_LTALAVGVGV_					0	0	0		ENST00000369842.8_1_X:153609573-153609861:+|nuORF	ENST00000369842.8_1_X:153609573-153609861:+|nuORF	ENST00000369842.8_1_X:153609573-153609861:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2819519042969	2	450.28166	898.548768	-1.5802	-0.00071153	0.1174	5.2864E-05	-1.4628	-0.00065866	450.2815888715555	41.533	0.79427	42.167	41.952	42.746	0.6339					35	20	3	0	0	0	0.67608	1	3659	3659		45.952	3.0877	1	1350400			34906	10628	23130	23139	39800	39800					0.09543545936958253
LTALHGHLH	9	Unmodified	_LTALHGHLH_					0	0	0			REV__ENST00000541124.5_1_17:40995311-40995464:+|nuORF	REV__ENST00000541124.5_1_17:40995311-40995464:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.19476318359375	2	499.780151	997.545748	1.8739	0.00093655	0.53244	0.0002661	2.4064	0.0012027	499.78025607414327	99.306	0.83498	99.669	99.409	100.24	0.36292					39	20	2	0	0	0	0.20789	1	12040	12040		65.803	41.6	1	886150	+		34907	28475	23131	23140	39801	39801					0.046877156027903766
LTALLEPL	8	Unmodified	_LTALLEPL_					0	0	0			REV__ENST00000448077.6_1_6:35310366-35387958:+|nuORF	REV__ENST00000448077.6_1_6:35310366-35387958:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2729797363281	2	435.270761	868.52697	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.72	1	103.99	103.49	104.49	0.26524								0	0	0	0.29568	1	12661	12661		35.201	0	1		+		34908	26833	23132	23141	39802	39802					0.08744741188377247
LTALMSLSM	9	2 Oxidation (M)	_LTALM(Oxidation (M))SLSM(Oxidation (M))_		LTALM(1)SLSM(1)		LTALM(59)SLSM(59)	0	0	2		nc|ENSG00000110079|Q96JQ5-2|MS4A4A;ENSG00000110079|ENST00000337908|MS4A4A	nc|ENSG00000110079|Q96JQ5-2|MS4A4A	nc|ENSG00000110079|Q96JQ5-2|MS4A4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.7472229003906	2	499.748479	997.482404	-0.85272	-0.00042615	-2.2136	-0.0011063	-3.0664	-0.0015324	499.74724797378053	74.742	3.1094	75.133	73.907	77.016	0.3911					155	76	3	0	0	0	0.38563	1	8406	8406		58.782	14.665	1	1032200			34909	2509	23133	23142	39803	39803		50;51			-0.016437740116202804
LTAMLRSL	8	Unmodified	_LTAMLRSL_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-4|MYH14	REV__nc|ENSG00000105357|Q7Z406-4|MYH14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.7682800292969	2	452.767863	903.521173	-0.29923	-0.00013548	1.5988	0.00072387	1.2995	0.00058839	452.76847785034585	29.879	0.94346	29.836	29.448	30.392	-0.043095					34	22	2	0	0	0	0.82658	1	1613	1613		21.96	1.4781	1	69345	+		34910	17528	23134	23143	39804	39804					0.06555319405049431
LTAMQRQLKKH	11	Unmodified	_LTAMQRQLKKH_					0	0	0		nc|ENSG00000107745|Q9BPX6-2|MICU1;ENSG00000107745|ENST00000361114|MICU1;nc|ENSG00000107745|Q9BPX6-3|MICU1;nc|ENSG00000107745|Q9BPX6-6|MICU1;nc|ENSG00000107745|Q9BPX6-5|MICU1;nc|ENSG00000107745|Q9BPX6-4|MICU1	nc|ENSG00000107745|Q9BPX6-2|MICU1	nc|ENSG00000107745|Q9BPX6-2|MICU1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9322814941406	3	451.930968	1352.77107	0.73765	0.00033337	3.0405	0.0013741	3.7781	0.0017074	451.932241061631	98.904	2.3627	99.06	97.538	99.901	0.15659					136	54	4	0	0	0	0.74771	1	10366	10366		22.562	4.7284	1	302530			34911	2365	23135	23144	39805	39805					0.1087987701066595
LTAPSLSY	8	Unmodified	_LTAPSLSY_					0	0	0		ENSG00000060749|ENST00000650167|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1	ENSG00000060749|ENST00000650167|QSER1	ENSG00000060749|ENST00000650167|QSER1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2951354980469	2	426.229094	850.443634	-0.49915	-0.00021275	1.5891	0.00067733	1.09	0.00046458	426.22979865956273	71.37	0.70447	71.755	71.545	72.25	0.38449					25	16	2	0	0	0	0.4196	1	7926	7926		42.474	10.52	1	93269			34912	1069	23136	23145	39806	39806					0.012430047405246114
LTAQLESIKR	10	Unmodified	_LTAQLESIKR_					0	0	0		ENSG00000152409|ENST00000396137|JMY;nc|ENSG00000152409|Q8N9B5-2|JMY;ENST00000412001.1_1_5:78596080-78620854:+|nuORF	ENSG00000152409|ENST00000396137|JMY	ENSG00000152409|ENST00000396137|JMY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.8447265625	2	579.845687	1157.67682	0.46014	0.00026681	-3.2581	-0.0018892	-2.7979	-0.0016224	579.8436677237017	102.22	1.1397	102.27	101.85	102.99	0.043198					70	27	3	0	0	0	0.86106	1	11104	11104		33.922	4.7516	1	1168900			34913	5173	23137	23146	39807	39807					0.10429061460172306
LTAQPMVFM	9	Oxidation (M)	_LTAQPM(Oxidation (M))VFM_		LTAQPM(0.719)VFM(0.281)		LTAQPM(4.1)VFM(-4.1)	0	0	1		ENST00000268035.10_1_15:99506776-99506884:+|nuORF	ENST00000268035.10_1_15:99506776-99506884:+|nuORF	ENST00000268035.10_1_15:99506776-99506884:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.257568359375	2	527.259013	1052.50347	0.66214	0.00034912	-4.0223	-0.0021208	-3.3601	-0.0017717	527.2567706615374	25.253	0.8396	25.303	24.898	25.737	0.050451					79	32	4	0	0	0	0.5393	1	1010	1010		50.025	7.6284	2	313920			34914	9533	23138	23147	39808	39808		163			-0.020677639121004177
LTARACEF	8	Carbamidomethyl (C)	_LTARAC(Carbamidomethyl (C))EF_	LTARAC(1)EF		LTARAC(53)EF		0	1	0			REV__nc|ENSG00000128191|Q8WYQ5-3|DGCR8	REV__nc|ENSG00000128191|Q8WYQ5-3|DGCR8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.2364196777344	2	484.236927	966.459301	-0.090811	-4.3974E-05	-1.4391	-0.00069688	-1.5299	-0.00074085	484.23629485715105	85.756	1.1553	85.823	85.466	86.622	0.067261					89	26	5	0	0	0	0.93786	1	8607	8607		53.351	9.2347	1	4298800	+		34915	29831	23139	23148	39809	39809	358				-0.025270320140862168
LTARACEF	8	Carbamidomethyl (C)	_LTARAC(Carbamidomethyl (C))EF_	LTARAC(1)EF		LTARAC(61)EF		0	1	0			REV__nc|ENSG00000128191|Q8WYQ5-3|DGCR8	REV__nc|ENSG00000128191|Q8WYQ5-3|DGCR8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2370910644531	2	484.236927	966.459301	-0.37908	-0.00018357	-1.5342	-0.00074294	-1.9133	-0.0009265	484.2364959781966	84.251	0.72864	84.698	84.224	84.952	0.44736					63	17	5	0	0	0	0.83456	1	9832	9832		60.972	18.576	1	11473000	+		34916	29831	23139	23148	39810	39810	358				-0.025270320140862168
LTARLGRLH	9	Unmodified	_LTARLGRLH_					0	0	0			REV__ENSG00000236287|ENST00000413761|ZBED5	REV__ENSG00000236287|ENST00000413761|ZBED5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.2546997070312	2	518.82235	1035.63015	-0.12817	-6.6495E-05	-3.888	-0.0020172	-4.0162	-0.0020837	518.8201606196009	48.341	0.8793	49.245	48.885	49.765	0.90424					60	21	4	0	0	0	0.20789	1	4701	4701		11.511	0	1	3317100	+		34917	23788	23140	23149	39811	39811					0.11375666419553454
LTARSGLR	8	Unmodified	_LTARSGLR_					0	0	0		ENST00000609436.1_1_10:65225198-65225663:+|nuORF	ENST00000609436.1_1_10:65225198-65225663:+|nuORF	ENST00000609436.1_1_10:65225198-65225663:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.265625	2	437.266876	872.519199	0.72217	0.00031578	-3.1375	-0.0013719	-2.4154	-0.0010562	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.89043	1	687	687		35.618	0.41757	1	944940			34918	14484	23141	23150	39812	39812					0.07784026711476599
LTARSGLR	8	Unmodified	_LTARSGLR_					0	0	0		ENST00000609436.1_1_10:65225198-65225663:+|nuORF	ENST00000609436.1_1_10:65225198-65225663:+|nuORF	ENST00000609436.1_1_10:65225198-65225663:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.265625	2	437.266876	872.519199	0.61137	0.00026733	-3.2	-0.0013992	-2.5886	-0.0011319	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.92394	1	839	839		47.657	3.5405	1	1313200			34919	14484	23141	23150	39813	39813					0.07784026711476599
LTARSRISA	9	Unmodified	_LTARSRISA_					0	0	0			REV__ENSG00000177646|ENST00000308982|ACAD9	REV__ENSG00000177646|ENST00000308982|ACAD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7907409667969	2	487.790715	973.566878	0.54992	0.00026825	-0.9209	-0.00044921	-0.37098	-0.00018096	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.76764	1	8344	8344		34.173	3.6689	1	633420	+		34920	22221	23142	23151	39814	39814					0.07903680911658739
LTARSRISA	9	Unmodified	_LTARSRISA_					0	0	0			REV__ENSG00000177646|ENST00000308982|ACAD9	REV__ENSG00000177646|ENST00000308982|ACAD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7899475097656	2	487.790715	973.566878	0.6235	0.00030414	-1.3362	-0.00065176	-0.71266	-0.00034763	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.78528	1	7758	7758		29.17	0.020503	1	479320	+		34921	22221	23142	23151	39815	39815					0.07903680911658739
LTARSRISA	9	Unmodified	_LTARSRISA_					0	0	0			REV__ENSG00000177646|ENST00000308982|ACAD9	REV__ENSG00000177646|ENST00000308982|ACAD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79010009765625	2	487.790715	973.566878	-1.4525	-0.00070854	0.96091	0.00046872	-0.49164	-0.00023982	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.76764	1	7761	7761		34.173	5.9183	1	503530	+		34922	22221	23142	23151	39816	39816					0.07903680911658739
LTASFLVL	8	Unmodified	_LTASFLVL_					0	0	0			REV__nc|ENSG00000182489|Q6PP77-2|XKRX	REV__nc|ENSG00000182489|Q6PP77-2|XKRX	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.2469177246094	2	432.265479	862.516405	-1.5852	-0.00068521	-0.37811	-0.00016344	-1.9633	-0.00084866	432.2649495605745	97.877	0.48146	98.104	97.822	98.303	0.22787					15	10	2	0	0	0	0.4196	1	10146	10146		14.664	0	1	90709	+		34923	22526	23143	23152	39817	39817					0.07964758533933036
LTASIGKGS	9	Unmodified	_LTASIGKGS_					0	0	0			REV__nc|ENSG00000071203|Q9NXJ0-2|MS4A12	REV__nc|ENSG00000071203|Q9NXJ0-2|MS4A12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2396545410156	2	417.239993	832.465432	1.1543	0.00048161	-3.3628	-0.0014031	-2.2086	-0.0009215	417.2383113072555	88.159	1.3847	88.608	88.143	89.528	0.44893					70	33	3	0	0	0	0.64922	1	10391	10391		44.117	8.4985	1	808590	+		34924	16622	23144	23153	39818	39818					0.04249809489101608
LTASIGKGS	9	Unmodified	_LTASIGKGS_					0	0	0			REV__nc|ENSG00000071203|Q9NXJ0-2|MS4A12	REV__nc|ENSG00000071203|Q9NXJ0-2|MS4A12	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	417.239993	832.465432	1.1488	0.00047933	-3.1805	-0.001327	-2.0317	-0.00084772	417.2384906610176	88.485	2.0585	88.411	87.855	89.913	-0.074005	-0.098818	-0.0012218	NaN	44.117	110	48	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1559000	+		34925	16622	23144	23153							0.04249809489101608
LTASIGKGS	9	Unmodified	_LTASIGKGS_					0	0	0			REV__nc|ENSG00000071203|Q9NXJ0-2|MS4A12	REV__nc|ENSG00000071203|Q9NXJ0-2|MS4A12	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	417.239993	832.465432	-1.799	-0.00075061	-0.033577	-1.401E-05	-1.8326	-0.00076462	417.2397355139431	88.204	2.4422	88.405	87.8	90.242	0.20115	-0.10483	0.0014043	NaN	44.117	131	57	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1231700	+		34926	16622	23144	23153							0.04249809489101608
LTASIGKGS	9	Unmodified	_LTASIGKGS_					0	0	0			REV__nc|ENSG00000071203|Q9NXJ0-2|MS4A12	REV__nc|ENSG00000071203|Q9NXJ0-2|MS4A12	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	417.239993	832.465432	1.1543	0.00048161	-3.3628	-0.0014031	-2.2086	-0.0009215	417.2383113072555	88.159	1.3847	88.608	88.143	89.528	0.44893	0.098189	-0.0013739	NaN	44.117	70	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	808590	+		34927	16622	23144	23153							0.04249809489101608
LTATGGISAAY	11	Unmodified	_LTATGGISAAY_					0	0	0			REV__nc|ENSG00000141485|Q86YT5-2|SLC13A5	REV__nc|ENSG00000141485|Q86YT5-2|SLC13A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.7683715820312	2	512.769114	1023.52368	-1.8226	-0.00093456	1.6802	0.00086156	-0.14236	-7.2998E-05	512.7698417086234	38.338	0.98523	38.349	37.991	38.976	0.011173					59	22	4	0	0	0	0.33233	2	2603	2603;2635		66.429	11.665	1	512150	+		34928	19690	23145	23154	39819;39820	39819					0.012854463437065533
LTATILTM	8	Unmodified	_LTATILTM_					0	0	0		ENSG00000180535|ENST00000609256|BHLHA15	ENSG00000180535|ENST00000609256|BHLHA15	ENSG00000180535|ENST00000609256|BHLHA15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.24639892578125	2	432.248972	862.48339	-1.8339	-0.00079269	-2.4337	-0.001052	-4.2676	-0.0018447	432.24785776580563	97.992	1.1927	98.188	97.805	98.997	0.19585					63	26	3	0	0	0	0.884	1	10113	10113		33.516	5.2613	1	609590			34929	7333	23146	23155	39821	39821					0.04664808419579458
LTATTTLI	8	Unmodified	_LTATTTLI_					0	0	0			REV__ENST00000583329.5_1_17:73699767-73702598:+|nuORF	REV__ENST00000583329.5_1_17:73699767-73702598:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2532043457031	2	417.252569	832.490584	0.14587	6.0863E-05	1.2459	0.00051986	1.3918	0.00058073	417.25289166109235	35.368	1.357	35.474	35.11	36.467	0.10604					60	43	2	0	0	0	0.81548	1	1900	1900		20.482	4.8456	1	170260	+		34930	20766	23147	23156	39822	39822					0.06763864291679056
LTATTTLI	8	Unmodified	_LTATTTLI_					0	0	0			REV__ENST00000583329.5_1_17:73699767-73702598:+|nuORF	REV__ENST00000583329.5_1_17:73699767-73702598:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2523193359375	2	417.252569	832.490584	0.19004	7.9296E-05	0.29237	0.00012199	0.48241	0.00020129	417.25266154969415	40.16	1.5962	40.242	39.962	41.558	0.081345					103	51	3	0	0	0	0.81724	1	2529	2529		14.664	0	1	586280	+		34931	20766	23147	23156	39823	39823					0.06763864291679056
LTAWMTQISIP	11	Oxidation (M)	_LTAWM(Oxidation (M))TQISIP_		LTAWM(1)TQISIP		LTAWM(77)TQISIP	0	0	1			REV__nc|ENSG00000172830|Q8TE77-4|SSH3	REV__nc|ENSG00000172830|Q8TE77-4|SSH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	639.3353881835938	2	638.833931	1275.65331	0.70348	0.0004494	1.9691	0.0012579	2.6725	0.0017073	638.8348170860995	74.695	1.1442	74.827	74.537	75.682	0.13208					77	32	4	0	0	0	0.241	1	6942	6942		77.318	15.626	1	682170	+		34932	21858	23148	23157	39824	39824		327			0.026508796313692073
LTAWPSTLY	9	Unmodified	_LTAWPSTLY_					0	0	0		ENST00000496699.1_1_1:117509714-117517097:+|nuORF	ENST00000496699.1_1_1:117509714-117517097:+|nuORF	ENST00000496699.1_1_1:117509714-117517097:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2747192382812	2	526.276575	1050.5386	0.42062	0.00022136	-4.3064	-0.0022664	-3.8858	-0.002045	526.2742119410344	55.335	0.74729	55.903	55.616	56.363	0.56836					42	17	3	0	0	0	0.28875	1	5688	5688		65.803	3.6958	1	1627500			34933	12787	23149	23158	39825	39825					0.015349382117165078
LTCPPRLN	8	Unmodified	_LTCPPRLN_					0	0	0		ENST00000584667.5_1_17:73702772-73703135:+|nuORF	ENST00000584667.5_1_17:73702772-73703135:+|nuORF	ENST00000584667.5_1_17:73702772-73703135:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2642822265625	2	457.249837	912.485122	-1.2543	-0.00057353	0.5976	0.00027325	-0.6567	-0.00030028	457.24994749261015	81.825	0.10834	81.825	81.738	81.847	0					4	2	2	0	0	0	0.4196	1	7596	7596		29.15	11.785	1	22995			34934	14139	23150	23159	39826	39826					0.025378622281891694
LTCSADPH	8	Unmodified	_LTCSADPH_					0	0	0			REV__ENST00000563674.1_1_16:28884474-28884783:+|nuORF	REV__ENST00000563674.1_1_16:28884474-28884783:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1879577636719	2	422.186903	842.359253	3.3516	0.001415	1.2532	0.00052908	4.6048	0.0019441	422.18733705477956	103.33	0.95329	103.59	103.33	104.29	0.26524					40	22	2	0	0	0	0.9159	1	12660	12660		44.531	7.5026	1	1633700	+		34935	28823	23151	23160	39827	39827					-0.06823269347887617
LTCSADPH	8	Unmodified	_LTCSADPH_					0	0	0			REV__ENST00000563674.1_1_16:28884474-28884783:+|nuORF	REV__ENST00000563674.1_1_16:28884474-28884783:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1888122558594	2	422.186903	842.359253	3.7553	0.0015854	-0.69371	-0.00029288	3.0616	0.0012926	422.1872219331884	104.53	1.0794	104.76	104.25	105.33	0.2268					81	25	5	0	0	0	0.9159	1	12741	12741		44.531	2.0566	1	3012900	+		34936	28823	23151	23160	39828	39828					-0.06823269347887617
LTDDDLLRY	9	Unmodified	_LTDDDLLRY_					0	0	0		ENSG00000114480|ENST00000429644|GBE1;ENST00000484687.1_1_3:81584326-81627079:-|nuORF	ENSG00000114480|ENST00000429644|GBE1	ENSG00000114480|ENST00000429644|GBE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.7711791992188	2	562.285128	1122.5557	-1.2296	-0.00069138	0.95462	0.00053677	-0.27497	-0.00015461	562.2856313826477	64.065	0.54739	64.064	63.857	64.404	-0.00078583					26	17	2	0	0	0	0.12232	1	5976	5976		72.879	16.158	1	159580			34937	2773	23152	23161	39829	39829					-0.0006718597312556085
LTDDGNKWLY	10	Unmodified	_LTDDGNKWLY_					0	0	0		nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2;ENSG00000175166|ENST00000310118|PSMD2;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;ENST00000460628.1_1_3:184020551-184021585:+|nuORF	nc|ENSG00000175166|Q13200-2|PSMD2	nc|ENSG00000175166|Q13200-2|PSMD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.798095703125	2	612.798403	1223.58225	-0.391	-0.0002396	0.048727	2.986E-05	-0.34227	-0.00020974	612.7983531277289	60.256	1.2459	60.243	59.789	61.035	-0.013729					85	35	4	0	0	0	0.00020646	7	5559	5538;5548;5559;5569;5579;5590;5602		145.16	54.786	1	1804700			34938	6993	23153	23162	39830;39831;39832;39833;39834;39835;39836	39832					-0.020594970817910507
LTDDGNKWLY	10	Unmodified	_LTDDGNKWLY_					0	0	0		nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2;ENSG00000175166|ENST00000310118|PSMD2;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;ENST00000460628.1_1_3:184020551-184021585:+|nuORF	nc|ENSG00000175166|Q13200-2|PSMD2	nc|ENSG00000175166|Q13200-2|PSMD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.798095703125	2	612.798403	1223.58225	0.49678	0.00030443	-0.92271	-0.00056543	-0.42592	-0.000261	612.79773543131	60.179	1.1342	60.147	59.804	60.939	-0.031727					87	31	4	0	0	0	0.0085745	7	5670	5640;5650;5660;5670;5680;5690;5701		132.76	53.045	1	1989600			34939	6993	23153	23162	39837;39838;39839;39840;39841;39842;39843	39840					-0.020594970817910507
LTDDGNKWLY	10	Unmodified	_LTDDGNKWLY_					0	0	0		nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2;ENSG00000175166|ENST00000310118|PSMD2;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;ENST00000460628.1_1_3:184020551-184021585:+|nuORF	nc|ENSG00000175166|Q13200-2|PSMD2	nc|ENSG00000175166|Q13200-2|PSMD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.7980346679688	2	612.798403	1223.58225	-1.555	-0.0009529	1.1785	0.00072219	-0.37649	-0.00023071	612.7990621200101	60.094	1.1299	60.127	59.799	60.929	0.032825					88	31	4	0	0	0	1.2389E-16	7	5574	5554;5565;5574;5585;5594;5603;5614		167.23	57.109	1	2009500			34940	6993	23153	23162	39844;39845;39846;39847;39848;39849;39850	39846					-0.020594970817910507
LTDDGNKWLY	10	Unmodified	_LTDDGNKWLY_					0	0	0		nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2;ENSG00000175166|ENST00000310118|PSMD2;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;ENST00000460628.1_1_3:184020551-184021585:+|nuORF	nc|ENSG00000175166|Q13200-2|PSMD2	nc|ENSG00000175166|Q13200-2|PSMD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.7979736328125	2	612.798403	1223.58225	1.0971	0.0006723	-1.357	-0.00083159	-0.25993	-0.00015929	612.7975558435289	60.093	0.81431	60.187	59.879	60.693	0.094059					69	30	4	0	0	0	0.062066	3	5183	5164;5173;5183		107.01	38.221	1	761730			34941	6993	23153	23162	39851;39852;39853	39853					-0.020594970817910507
LTDDGNKWLY	10	Unmodified	_LTDDGNKWLY_					0	0	0		nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2;ENSG00000175166|ENST00000310118|PSMD2;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;ENST00000460628.1_1_3:184020551-184021585:+|nuORF	nc|ENSG00000175166|Q13200-2|PSMD2	nc|ENSG00000175166|Q13200-2|PSMD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.7987060546875	2	612.798403	1223.58225	0.54561	0.00033435	-0.7547	-0.00046248	-0.20909	-0.00012813	612.7979298307259	60.047	0.7133	60.164	59.843	60.556	0.11676					61	24	3	0	0	0	0.18075	4	5180	5163;5180;5189;5198		90.601	20.973	1	776520			34942	6993	23153	23162	39854;39855;39856;39857	39855					-0.020594970817910507
LTDDGNKWLY	10	Unmodified	_LTDDGNKWLY_					0	0	0		nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2;ENSG00000175166|ENST00000310118|PSMD2;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;ENST00000460628.1_1_3:184020551-184021585:+|nuORF	nc|ENSG00000175166|Q13200-2|PSMD2	nc|ENSG00000175166|Q13200-2|PSMD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.7979125976562	2	612.798403	1223.58225	-0.26076	-0.0001598	0.12283	7.527E-05	-0.13794	-8.4526E-05	612.7983695527461	60.162	0.93864	60.163	59.86	60.798	0.00051498					65	32	3	0	0	0	0.38353	1	5208	5208		65.465	3.358	1	772020			34943	6993	23153	23162	39858	39858					-0.020594970817910507
LTDIPDKAQ	9	Unmodified	_LTDIPDKAQ_					0	0	0			REV__chr12:54058564-54102214|18|19.06|0.0|20.86|+|1|FLJ12825,None|1	REV__chr12:54058564-54102214|18|19.06|0.0|20.86|+|1|FLJ12825,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.7685546875	2	500.769114	999.523675	0.23845	0.00011941	0.20802	0.00010417	0.44647	0.00022358	500.76914100854236	38.199	0.50917	38.293	37.957	38.467	0.094322					28	17	2	0	0	0	0.75725	1	2221	2221		36.447	2.2742	1	91798	+		34944	15541	23154	23163	39859	39859					0.023894463437045488
LTDIYKTF	8	Unmodified	_LTDIYKTF_					0	0	0		L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|138|3|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|138|3|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|138|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.7687072753906	2	500.771126	999.527698	0.12786	6.403E-05	-4.2809	-0.0021438	-4.1531	-0.0020797	500.7687392027706	38.334	0.54691	38.306	38.039	38.586	-0.027843					18	12	2	0	0	0	0.93293	1	2577	2577		51.335	1.8939	1	97068			34945	14548	23155	23164	39860	39860					0.02791535837434367
LTDLIGRDK	9	Unmodified	_LTDLIGRDK_					0	0	0			REV__nc|ENSG00000046651|O75665-3|OFD1	REV__nc|ENSG00000046651|O75665-3|OFD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	515.79736328125	2	515.798206	1029.58186	0.86203	0.00044463	-0.8464	-0.00043657	0.015635	8.0647E-06	515.7976040418051	22.225	0.54082	22.29	22.042	22.583	0.064745					35	20	2	0	0	0	0.77244	1	647	647		32.812	0	1	49133	+		34946	16345	23156	23165	39861	39861					0.06825127988986424
LTDPEAAKY	9	Unmodified	_LTDPEAAKY_					0	0	0		chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1;ENST00000459805.5_1_1:155184905-155186549:-|nuORF;nc|ENSG00000177628|P04062-3|GBA1;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;nc|ENSG00000177628|P04062-4|GBA1;nc|ENSG00000177628|P04062-5|GBA1;nc|ENSG00000177628|P04062-2|GBA1;ENSG00000177628|ENST00000368373|GBA1	chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1	chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	504.2555236816406	2	504.25584	1006.49713	-0.99986	-0.00050419	1.0052	0.00050688	0.0053374	2.6914E-06	504.2561611406814	38.494	0.83413	38.444	38.073	38.907	-0.05006					44	18	3	0	0	0	0.24527	1	2697	2697		69.628	20.186	1	378840			34947	24	23157	23166	39862	39862					-0.005862425476266253
LTDPEAAKY	9	Unmodified	_LTDPEAAKY_					0	0	0		chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1;ENST00000459805.5_1_1:155184905-155186549:-|nuORF;nc|ENSG00000177628|P04062-3|GBA1;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;nc|ENSG00000177628|P04062-4|GBA1;nc|ENSG00000177628|P04062-5|GBA1;nc|ENSG00000177628|P04062-2|GBA1;ENSG00000177628|ENST00000368373|GBA1	chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1	chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	504.2550354003906	2	504.25584	1006.49713	-2.4239	-0.0012223	2.2183	0.0011186	-0.20565	-0.0001037	504.2567985765667	38.487	0.93784	38.498	38.08	39.018	0.011173					45	21	3	0	0	0	0.065196	1	2636	2636		101.6	24.827	1	312440			34948	24	23157	23166	39863	39863					-0.005862425476266253
LTDPEAAKY	9	Unmodified	_LTDPEAAKY_					0	0	0		chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1;ENST00000459805.5_1_1:155184905-155186549:-|nuORF;nc|ENSG00000177628|P04062-3|GBA1;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;nc|ENSG00000177628|P04062-4|GBA1;nc|ENSG00000177628|P04062-5|GBA1;nc|ENSG00000177628|P04062-2|GBA1;ENSG00000177628|ENST00000368373|GBA1	chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1	chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	504.25584	1006.49713	0.15254	7.6919E-05	-0.26559	-0.00013392	-0.11305	-5.7004E-05	504.2555115382783	38.593	0.85609	38.565	38.261	39.117	-0.027843	0.030044	-0.0013773	NaN	101.6	42	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	296230			34949	24	23157	23166							-0.005862425476266253
LTDPEAAKY	9	Unmodified	_LTDPEAAKY_					0	0	0		chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1;ENST00000459805.5_1_1:155184905-155186549:-|nuORF;nc|ENSG00000177628|P04062-3|GBA1;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;nc|ENSG00000177628|P04062-4|GBA1;nc|ENSG00000177628|P04062-5|GBA1;nc|ENSG00000177628|P04062-2|GBA1;ENSG00000177628|ENST00000368373|GBA1	chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1	chr1:155236469-155237344|13|18.92|0.59|5.0|-|0|GBA1,None|1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	504.25584	1006.49713	-0.54881	-0.00027674	-0.22178	-0.00011183	-0.77058	-0.00038857	504.2553946812981	38.622	0.3324	38.633	38.454	38.786	0.010708	0.097775	-0.0013331	NaN	101.6	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30020			34950	24	23157	23166							-0.005862425476266253
LTDPRLLY	8	Unmodified	_LTDPRLLY_					0	0	0		nc|ENSG00000151366|O95298-2|NDUFC2;ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-3|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14	nc|ENSG00000151366|O95298-2|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7841491699219	2	495.784567	989.554582	0.042684	2.1162E-05	-0.46751	-0.00023178	-0.42483	-0.00021062	495.78420511538275	48.828	0.52225	49.732	49.489	50.012	0.90424					31	12	3	0	0	0	0.87479	1	4733	4733		30.504	0.6621	1	1014400			34951	5111	23158	23167	39864	39864					0.0593864444861083
LTDPWSEGQL	10	Unmodified	_LTDPWSEGQL_					0	0	0			REV__ENST00000493542.1_1_22:31011707-31019156:+|nuORF	REV__ENST00000493542.1_1_22:31011707-31019156:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.279296875	2	573.277303	1144.54005	-0.12319	-7.0624E-05	0.18851	0.00010807	0.065316	3.7444E-05	573.277411621475	25.214	0.61848	25.173	24.893	25.511	-0.04117					30	16	3	0	0	0	0.82886	1	1065	1065		37.812	0	1	68124	+		34952	27697	23159	23168	39865	39865					-0.026434724901719164
LTDRGGPLGY	10	Unmodified	_LTDRGGPLGY_					0	0	0		nc|ENSG00000143382|Q6UY14-2|ADAMTSL4;ENSG00000143382|ENST00000271643|ADAMTSL4;nc|ENSG00000143382|Q6UY14-3|ADAMTSL4	nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.7733154296875	2	524.774731	1047.53491	0.21194	0.00011122	-0.65565	-0.00034407	-0.44371	-0.00023285	524.7742507295208	46.759	0.71973	46.746	46.355	47.075	-0.013821					40	18	3	0	0	0	0.4503	4	3770	3751;3761;3770;3780		59.931	19.424	1	341750			34953	4625	23160	23169	39866;39867;39868;39869	39868					0.013042684378660852
LTDRGGPLGY	10	Unmodified	_LTDRGGPLGY_					0	0	0		nc|ENSG00000143382|Q6UY14-2|ADAMTSL4;ENSG00000143382|ENST00000271643|ADAMTSL4;nc|ENSG00000143382|Q6UY14-3|ADAMTSL4	nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.7744750976562	2	524.774731	1047.53491	-0.37772	-0.00019822	-0.22568	-0.00011843	-0.6034	-0.00031665	524.7745561567345	46.712	0.67035	46.683	46.355	47.025	-0.028782					37	15	3	0	0	0	0.51401	3	3837	3837;3850;3861		54.722	13.944	1	336060			34954	4625	23160	23169	39870;39871;39872	39870					0.013042684378660852
LTDRGGPLGY	10	Unmodified	_LTDRGGPLGY_					0	0	0		nc|ENSG00000143382|Q6UY14-2|ADAMTSL4;ENSG00000143382|ENST00000271643|ADAMTSL4;nc|ENSG00000143382|Q6UY14-3|ADAMTSL4	nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.7738647460938	2	524.774731	1047.53491	0.31757	0.00016665	-0.98814	-0.00051855	-0.67057	-0.0003519	524.7742180643073	46.698	0.71379	46.694	46.413	47.127	-0.0041618					38	17	3	0	0	0	0.2953	2	3798	3787;3798		72.879	26.45	1	419590			34955	4625	23160	23169	39873;39874	39874					0.013042684378660852
LTDSIVRLY	9	Unmodified	_LTDSIVRLY_					0	0	0			REV__ENST00000330212.7_1_3:113672705-113672987:+|nuORF	REV__ENST00000330212.7_1_3:113672705-113672987:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.3104248046875	2	540.308406	1078.60226	-1.0194	-0.00055081	1.0945	0.00059138	0.075088	4.0571E-05	540.3090667593755	74.837	0.75409	74.923	74.628	75.382	0.085907					34	20	3	0	0	0	0.38563	1	6921	6921		58.782	6.4828	1	106930	+		34956	25106	23161	23170	39875	39875					0.0661029864882039
LTDVRNLKF	9	Unmodified	_LTDVRNLKF_					0	0	0		ENSG00000172071|ENST00000303236|EIF2AK3	ENSG00000172071|ENST00000303236|EIF2AK3	ENSG00000172071|ENST00000303236|EIF2AK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3204956054688	2	553.321848	1104.62914	-0.31943	-0.00017675	-3.1302	-0.001732	-3.4496	-0.0019088	553.3199245640596	78.592	1.572	79.002	78.675	80.247	0.41059					57	36	3	0	0	0	0.44421	1	9000	9000		54.776	1.8396	1	749560			34957	6739	23162	23171	39876	39876					0.08101407260005544
LTDYFTKI	8	Unmodified	_LTDYFTKI_					0	0	0		ENST00000570019.1_1_15:34666200-34666557:-|nuORF	ENST00000570019.1_1_15:34666200-34666557:-|nuORF	ENST00000570019.1_1_15:34666200-34666557:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.76788330078125	2	500.771126	999.527698	-2.6284	-0.0013162	-1.6029	-0.00080271	-4.2313	-0.0021189	500.7701721276605	38.102	0.59026	38.114	37.857	38.447	0.011173					25	13	3	0	0	0	0.93786	1	2588	2588		53.351	5.3919	1	101200			34958	13990	23163	23172	39877	39877					0.02791535837422998
LTEALLAVV	9	Unmodified	_LTEALLAVV_					0	0	0		nc|ENSG00000140691|Q96C12-2|ARMC5;ENSG00000140691|ENST00000268314|ARMC5;ENST00000457010.6_2_16:31477307-31478207:+|nuORF	nc|ENSG00000140691|Q96C12-2|ARMC5	nc|ENSG00000140691|Q96C12-2|ARMC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7902526855469	2	464.789318	927.564084	-1.14	-0.00052988	4.1432	0.0019257	3.0031	0.0013958	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.76996	1	1778	1778		33.516	3.0119	1	286820			34959	4453	23164	23173	39878	39878					0.09740412734129222
LTEALLAVV	9	Unmodified	_LTEALLAVV_					0	0	0		nc|ENSG00000140691|Q96C12-2|ARMC5;ENSG00000140691|ENST00000268314|ARMC5;ENST00000457010.6_2_16:31477307-31478207:+|nuORF	nc|ENSG00000140691|Q96C12-2|ARMC5	nc|ENSG00000140691|Q96C12-2|ARMC5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.7906188964844	2	464.789318	927.564084	0.89139	0.00041431	1.9223	0.00089347	2.8137	0.0013078	464.79003742399567	33.921	1.5866	34.225	33.702	35.289	0.30494					91	38	3	0	0	0	0.58151	1	2493	2493		47.916	5.4411	1	1052300			34960	4453	23164	23173	39879	39879					0.09740412734129222
LTECTPRHRSL	11	Unmodified	_LTECTPRHRSL_					0	0	0			REV__ENSG00000107554|ENST00000324109|DNMBP	REV__ENSG00000107554|ENST00000324109|DNMBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.22991943359375	3	438.231194	1311.67175	1.1558	0.0005065	-3.429	-0.0015027	-2.2732	-0.00099619	438.2296157874905	28.42	0.82828	28.247	27.846	28.674	-0.17336					56	20	4	0	0	0	0.71207	1	1748	1748		29.551	2.801	1	583210	+		34961	17661	23165	23174	39880	39880					0.028384343259176603
LTEGLVPLAV	10	Unmodified	_LTEGLVPLAV_					0	0	0			REV__ENSG00000183665|ENST00000328599|TRMT12	REV__ENSG00000183665|ENST00000328599|TRMT12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.31024169921875	2	506.307875	1010.6012	-1.6116	-0.00081596	4.0929	0.0020723	2.4813	0.0012563	506.3098944096933	39.424	1.5109	39.424	38.73	40.241	0					81	36	3	0	0	0	0.86763	1	2557	2557		26.693	3.6504	1	128650	+		34962	22619	23166	23175	39881	39881					0.0963208427989457
LTEHLKNSY	9	Unmodified	_LTEHLKNSY_					0	0	0		ENSG00000072364|ENST00000265343|AFF4	ENSG00000072364|ENST00000265343|AFF4	ENSG00000072364|ENST00000265343|AFF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7901611328125	2	552.787838	1103.56112	-0.074961	-4.1437E-05	3.9272	0.0021709	3.8523	0.0021295	552.7899670073601	73.384	1.516	73.938	73.561	75.077	0.55386					106	41	4	0	0	0	0.032438	1	8284	8284		116.9	22.897	1	13238000			34963	1274	23167	23176	39882	39882					0.013485376093512969
LTEKISKG	8	Unmodified	_LTEKISKG_					0	0	0			REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.262451171875	2	438.263468	874.512382	-1.8646	-0.00081717	1.0768	0.00047194	-0.78773	-0.00034523	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.81897	1	2744	2744		20.947	0.4651	1	3384400	+		34964	20880	23168	23177	39883	39883					0.07010669040232642
LTEKISKG	8	Unmodified	_LTEKISKG_					0	0	0			REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633361816406	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.84579	1	2617	2617		24.519	1.4767	1	2361100	+		34965	20880	23168	23177	39884	39884					0.07010669040232642
LTEKTLPG	8	Unmodified	_LTEKTLPG_					0	0	0		ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.74945068359375	2	429.750193	857.485833	-1.7334	-0.00074493	0.77902	0.00033479	-0.95437	-0.00041014	429.7503701051042	40.361	2.4974	40.367	40.029	42.526	0.0065002					186	77	3	0	0	0	0.91982	2	2573	2573;2582		45.972	14.017	1	3826800			34966	11118	23169	23178	39885;39886	39885					0.05138980148922201
LTEKTLPG	8	Unmodified	_LTEKTLPG_					0	0	0		ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.7506408691406	2	429.750193	857.485833	0.19062	8.192E-05	-1.2633	-0.00054292	-1.0727	-0.000461	429.7494836550346	40.163	2.386	40.244	39.962	42.348	0.081345					177	71	3	0	0	0	0.90523	2	2551	2551;2561		49.442	12.282	1	3979000			34967	11118	23169	23178	39887;39888	39887					0.05138980148922201
LTEKTLPG	8	Unmodified	_LTEKTLPG_					0	0	0		ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.74993896484375	2	429.750193	857.485833	-0.15763	-6.7743E-05	-0.95449	-0.00041019	-1.1121	-0.00047794	429.7496181624476	40.277	2.7409	40.229	39.975	42.716	-0.04789					188	88	4	0	0	0	0.90837	1	2560	2560		56.721	3.3696	1	4300300			34968	11118	23169	23178	39889	39889					0.05138980148922201
LTEKTLPG	8	Unmodified	_LTEKTLPG_					0	0	0		ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.750732421875	2	429.750193	857.485833	0.60427	0.00025969	0.37111	0.00015949	0.97539	0.00041917	429.75036736011566	34.927	1.9228	35.138	34.854	36.777	0.21003					152	48	4	0	0	0	0.60357	4	2624	2600;2624;2732;2757		71.296	9.6365	1	5113100			34969	11118	23169	23178	39890;39891;39892;39893	39891					0.05138980148922201
LTEKTLPG	8	Unmodified	_LTEKTLPG_					0	0	0		ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7494201660156	2	429.750193	857.485833	-2.154	-0.00092569	1.0157	0.0004365	-1.1383	-0.00048919	429.75051038702645	40.625	2.1327	41.017	40.832	42.965	0.39209					111	57	2	0	0	0	0.89494	1	3585	3585		37.159	0	1	10174000			34970	11118	23169	23178	39894	39894					0.05138980148922201
LTEKTLPG	8	Unmodified	_LTEKTLPG_					0	0	0		ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7505187988281	2	429.750193	857.485833	1.5892	0.00068294	-0.58551	-0.00025162	1.0037	0.00043132	429.74995933180253	34.855	1.9588	35.237	34.934	36.893	0.3812					144	49	4	0	0	0	0.90089	4	2743	2623;2683;2743;2755		51.335	8.4985	1	5947200			34971	11118	23169	23178	39895;39896;39897;39898	39897					0.05138980148922201
LTEKTLPG	8	Unmodified	_LTEKTLPG_					0	0	0		ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	ENST00000396504.6_1_22:41925022-41925175:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7490234375	2	429.750193	857.485833	-1.2651	-0.00054369	0.44911	0.000193	-0.81601	-0.00035068	429.7502304021701	40.953	2.5169	41.587	40.841	43.358	0.6339					165	67	3	0	0	0	0.89043	5	3519	3519;3531;3567;3579;3604		51.335	8.7928	1	8697100			34972	11118	23169	23178	39899;39900;39901;39902;39903	39899					0.05138980148922201
LTELVPTQ	8	Unmodified	_LTELVPTQ_					0	0	0		ENST00000491987.1_1_22:35723272-35729230:+|nuORF;ENST00000404284.6_1_22:35717823-35727385:+|nuORF;nc|ENSG00000100284|O60784-3|TOM1;nc|ENSG00000100284|O60784-4|TOM1;ENST00000424387.5_1_22:35695884-35743199:+|nuORF;ENSG00000100284|ENST00000449058|TOM1;nc|ENSG00000100284|O60784-2|TOM1	ENST00000491987.1_1_22:35723272-35729230:+|nuORF	ENST00000491987.1_1_22:35723272-35729230:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.755615234375	2	450.755475	899.496398	0.58167	0.00026219	-3.5127	-0.0015834	-2.9311	-0.0013212	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.90523	1	7831	7831		40.778	6.6056	1	285810			34973	1819	23170	23179	39904	39904					0.0426296280331826
LTENQKNRRFE	11	Unmodified	_LTENQKNRRFE_					0	0	0		ENST00000425046.1_1_3:4345037-4358927:+|nuORF;nc|ENSG00000170364|Q53H47-3|SETMAR;ENSG00000170364|ENST00000358065|SETMAR	ENST00000425046.1_1_3:4345037-4358927:+|nuORF	ENST00000425046.1_1_3:4345037-4358927:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9188537597656	3	478.919785	1433.73752	-1.8708	-0.00089594	3.5403	0.0016955	1.6696	0.00079958	479.25567644702744	31.667	0.49841	31.667	31.411	31.91	0					25	18	2	0	0	0	0.75457	1	1532	1532		21.032	1.7696	1	54059			34974	6579	23171	23180	39905	39905					0.03800546772436064
LTEQYNEQY	9	Unmodified	_LTEQYNEQY_					0	0	0		nc|ENSG00000239306|Q96PK6-5|RBM14;ENSG00000173933|ENST00000310092|RBM4	nc|ENSG00000239306|Q96PK6-5|RBM14	nc|ENSG00000239306|Q96PK6-5|RBM14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	594.2645263671875	2	594.264393	1186.51423	-0.19795	-0.00011763	0.5323	0.00031632	0.33435	0.00019869	594.2645997371604	48.076	0.47601	48.051	47.88	48.356	-0.025116					22	11	3	0	0	0	0.1516	2	4058	4046;4058		83.647	21.94	1	203730			34975	6901	23172	23181	39906;39907	39907					-0.07156366732488095
LTEQYNEQY	9	Unmodified	_LTEQYNEQY_					0	0	0		nc|ENSG00000239306|Q96PK6-5|RBM14;ENSG00000173933|ENST00000310092|RBM4	nc|ENSG00000239306|Q96PK6-5|RBM14	nc|ENSG00000239306|Q96PK6-5|RBM14	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	594.264393	1186.51423	-0.40351	-0.00023979	0.89473	0.00053171	0.49122	0.00029191	594.264958710082	48.181	0.4206	48.171	47.963	48.383	-0.0093269	-0.0031404	-0.00022923	NaN	83.647	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147200			34976	6901	23172	23181							-0.07156366732488095
LTEQYNEQY	9	Unmodified	_LTEQYNEQY_					0	0	0		nc|ENSG00000239306|Q96PK6-5|RBM14;ENSG00000173933|ENST00000310092|RBM4	nc|ENSG00000239306|Q96PK6-5|RBM14	nc|ENSG00000239306|Q96PK6-5|RBM14	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	594.264393	1186.51423	0.42106	0.00025022	0.14022	8.3329E-05	0.56128	0.00033355	594.2640257851084	48.265	0.2093	48.303	48.162	48.371	0.037735	0.12845	-0.001126	NaN	83.647	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59116			34977	6901	23172	23181							-0.07156366732488095
LTERSVSKV	9	Unmodified	_LTERSVSKV_					0	0	0			REV__nc|ENSG00000004766|Q96JG6-3|VPS50	REV__nc|ENSG00000004766|Q96JG6-3|VPS50	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.74969482421875	2	509.798206	1017.58186	0.83632	0.00042636	2.637	0.0013443	3.4733	0.0017707	509.798900614558	58.144	0.45148	58.697	58.47	58.922	0.55323					12	10	2	0	0	0	0.20789	1	6126	6126		14.865	3.3539	1	189110	+		34978	16061	23173	23182	39908	39908					0.07377127989002474
LTESAIPLV	9	Unmodified	_LTESAIPLV_					0	0	0			REV__ENSG00000166415|ENST00000360509|WDR72	REV__ENSG00000166415|ENST00000360509|WDR72	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.77703857421875	2	471.778951	941.543348	0.41412	0.00019537	-3.6367	-0.0017157	-3.2226	-0.0015204	471.7771080229048	27.847	0.43822	27.883	27.583	28.021	0.03607					21	13	2	0	0	0	0.76996	1	1283	1283		33.516	3.0119	1	27472	+		34979	21292	23174	23183	39909	39909					0.07023822354472031
LTESAIPLV	9	Unmodified	_LTESAIPLV_					0	0	0			REV__ENSG00000166415|ENST00000360509|WDR72	REV__ENSG00000166415|ENST00000360509|WDR72	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	471.778951	941.543348	0.41412	0.00019537	-3.6367	-0.0017157	-3.2226	-0.0015204	471.7771080229048	27.847	0.43822	27.883	27.583	28.021	0.03607	-0.039	-0.00099575	NaN	33.516	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27472	+		34980	21292	23174	23183							0.07023822354472031
LTEVNKTGTQY	11	Unmodified	_LTEVNKTGTQY_					0	0	0		ENSG00000124570|ENST00000380539|SERPINB6	ENSG00000124570|ENST00000380539|SERPINB6	ENSG00000124570|ENST00000380539|SERPINB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3232421875	2	627.322242	1252.62993	-0.19612	-0.00012303	0.12943	8.1194E-05	-0.066691	-4.1837E-05	627.3221549155553	35.547	0.63614	35.535	35.246	35.882	-0.012203					31	13	3	0	0	0	0.010615	1	2220	2220		109.83	48.138	1	299560			34981	3342	23175	23184	39910	39910					0.01372157118407813
LTEVNKTGTQY	11	Unmodified	_LTEVNKTGTQY_					0	0	0		ENSG00000124570|ENST00000380539|SERPINB6	ENSG00000124570|ENST00000380539|SERPINB6	ENSG00000124570|ENST00000380539|SERPINB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	627.3224487304688	2	627.322242	1252.62993	-0.59139	-0.00037099	0.42092	0.00026405	-0.17047	-0.00010694	627.3223714238213	35.598	0.63042	35.542	35.295	35.925	-0.055904					36	13	4	0	0	0	0.03847	2	2310	2310;2323		104.42	53.419	1	380530			34982	3342	23175	23184	39911;39912	39911					0.01372157118407813
LTEVNKTGTQY	11	Unmodified	_LTEVNKTGTQY_					0	0	0		ENSG00000124570|ENST00000380539|SERPINB6	ENSG00000124570|ENST00000380539|SERPINB6	ENSG00000124570|ENST00000380539|SERPINB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3229370117188	2	627.322242	1252.62993	-0.77804	-0.00048808	0.70981	0.00044528	-0.068235	-4.2805E-05	627.3226050872461	35.49	0.76936	35.499	35.212	35.981	0.0092773					42	16	4	0	0	0	0.00077091	2	2236	2236;2247		122.94	55.201	1	360830			34983	3342	23175	23184	39913;39914	39913					0.01372157118407813
LTFGDDGEEH	10	Unmodified	_LTFGDDGEEH_					0	0	0			REV__ENST00000507761.1_1_4:80148591-80148798:+|nuORF	REV__ENST00000507761.1_1_4:80148591-80148798:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3245849609375	2	560.233093	1118.45163	-1.3171	-0.00073788	-0.31715	-0.00017768	-1.6343	-0.00091556	560.2328959169887	43.845	0.49266	44.619	44.463	44.956	0.7738					24	11	3	0	0	0	0.37624	1	3988	3988		19.997	0	1	593050	+		34984	27913	23176	23185	39915	39915					-0.10285512800646757
LTFKACNK	8	Unmodified	_LTFKACNK_					0	0	0			REV__ENSG00000035720|ENST00000265404|STAP1	REV__ENSG00000035720|ENST00000265404|STAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	462.7501220703125	2	462.752213	923.489873	-0.2387	-0.00011046	-3.451	-0.001597	-3.6897	-0.0017074	462.75043297512474	47.383	0.53021	47.379	47.092	47.622	-0.0035286					22	15	2	0	0	0	0.90089	1	3892	3892		39.253	0.44669	1	194250	+		34985	16289	23177	23186	39916	39916					0.025067463709660842
LTFRPHLG	8	Unmodified	_LTFRPHLG_					0	0	0			REV__ENST00000556245.1_1_14:62011269-62016546:+|nuORF	REV__ENST00000556245.1_1_14:62011269-62016546:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76885986328125	2	470.771794	939.529036	-1.6002	-0.00075333	-4.3443	-0.0020452	-5.9445	-0.0027985	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.91472	1	4440	4440		44.117	3.5442	1	1490800	+		34986	28696	23178	23187	39917	39917					0.05685214716845621
LTFTDLPLCLQ	11	Unmodified	_LTFTDLPLCLQ_					0	0	0		ENST00000287396.2_1_8:124515615-124544254:-|nuORF;ENSG00000156804|ENST00000517956|FBXO32;ENST00000524000.5_1_8:124515615-124518835:-|nuORF;nc|ENSG00000156804|Q969P5-2|FBXO32	ENST00000287396.2_1_8:124515615-124544254:-|nuORF	ENST00000287396.2_1_8:124515615-124544254:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.891357421875	3	421.893297	1262.65806	-1.8665	-0.00078747	-2.6735	-0.0011279	-4.54	-0.0019154	421.8920663173041	29.324	1.0664	29.391	29.078	30.145	0.066727					131	48	5	0	0	0	0.71803	1	1264	1264		28.577	2.5133	1	728440			34987	9657	23179	23188	39918	39918					0.037237637741100116
LTFTKKEPLG	10	Unmodified	_LTFTKKEPLG_					0	0	0		ENSG00000136010|ENST00000258494|ALDH1L2	ENSG00000136010|ENST00000258494|ALDH1L2	ENSG00000136010|ENST00000258494|ALDH1L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3302612304688	2	567.331882	1132.64921	-1.3957	-0.00079181	-1.9666	-0.0011157	-3.3623	-0.0019075	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.8651	1	9071	9071		25.574	1.0549	1	5956400			34988	4080	23180	23189	39919	39919					0.08819158199935373
LTGESYQLFE	10	Unmodified	_LTGESYQLFE_					0	0	0			REV__ENSG00000198576|ENST00000356613|ARC	REV__ENSG00000198576|ENST00000356613|ARC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	593.7889404296875	2	593.784961	1185.55537	0.26073	0.00015482	-0.75721	-0.00044962	-0.49647	-0.0002948	593.7839524191514	68.789	0.70004	69.173	68.821	69.521	0.38416					34	16	3	0	0	0	0.77314	1	7562	7562		40.778	2.9666	1	236820	+		34989	23341	23181	23190	39920	39920					-0.029986056930056293
LTGGHQNS	8	Unmodified	_LTGGHQNS_					0	0	0			REV__ENSG00000164946|ENST00000380880|FREM1	REV__ENSG00000164946|ENST00000380880|FREM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7852783203125	2	407.196116	812.37768	1.6444	0.00066958	-1.4093	-0.00057387	0.23506	9.5715E-05	407.19708216021587	34.052	0.25327	34.262	34.065	34.319	0.21003					7	5	2	0	0	0	0.4196	1	2485	2485		42.396	8.2236	1	28724	+		34990	21133	23182	23191	39921	39921					-0.03601391381664598
LTGIPGTPD	9	Unmodified	_LTGIPGTPD_					0	0	0		nc|ENSG00000290649|Q8NH63|OR51H1	nc|ENSG00000290649|Q8NH63|OR51H1	nc|ENSG00000290649|Q8NH63|OR51H1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2515563964844	2	435.732	869.449448	-1.5652	-0.00068201	-1.6053	-0.00069946	-3.1705	-0.0013815	435.7313997174211	80.692	1.5405	80.797	80.194	81.735	0.10527					51	40	2	0	0	0	0.20789	1	7641	7641		26.693	0	1	63540			34991	15340	23183	23192	39922	39922					0.009501032521825437
LTGKARHS	8	Unmodified	_LTGKARHS_					0	0	0		ENSG00000273899|ENST00000359114|NOL12;ENST00000493862.5_1_22:38077834-38087340:+|nuORF	ENSG00000273899|ENST00000359114|NOL12	ENSG00000273899|ENST00000359114|NOL12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25177001953125	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87479	1	7328	7328		30.504	1.3541	1	1788100			34992	8990	23184	23193	39923	39923					0.04839453677379879
LTGLAAPIS	9	Unmodified	_LTGLAAPIS_					0	0	0			REV__ENST00000442218.2_1_12:48174732-48175212:+|nuORF	REV__ENST00000442218.2_1_12:48174732-48175212:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7518005371094	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.7932	2	7602	7602;7670		24.203	4.8428	1	579450	+		34993	26769	23185	23194	39924;39925	39924					0.06383284011531032
LTGLAAPIS	9	Unmodified	_LTGLAAPIS_					0	0	0			REV__ENST00000442218.2_1_12:48174732-48175212:+|nuORF	REV__ENST00000442218.2_1_12:48174732-48175212:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7517395019531	2	421.752736	841.490919	-1.7782	-0.00074997	0.91991	0.00038797	-0.85831	-0.000362	421.75218958440666	77.386	3.85	77.511	77.102	80.952	0.12485					260	132	4	0	0	0	0.7932	1	7264	7264		23.042	0	1	434130	+		34994	26769	23185	23194	39926	39926					0.06383284011531032
LTGLWKRKKSH	11	Unmodified	_LTGLWKRKKSH_					0	0	0			REV__MER70-int_dup184|chr9:104142620-104143459:+|1.110181688878976|0.2514137796431354|2.14|63.0|37|2|anti-sense	REV__MER70-int_dup184|chr9:104142620-104143459:+|1.110181688878976|0.2514137796431354|2.14|63.0|37|2|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9432067871094	3	451.941973	1352.80409	0.3266	0.00014761	2.2075	0.00099765	2.5341	0.0011453	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.78083	1	4303	4303		15.337	0.0043666	1	721610	+		34995	29658	23186	23195	39927	39927					0.14179827125030897
LTGLWKRKKSH	11	Unmodified	_LTGLWKRKKSH_					0	0	0			REV__MER70-int_dup184|chr9:104142620-104143459:+|1.110181688878976|0.2514137796431354|2.14|63.0|37|2|anti-sense	REV__MER70-int_dup184|chr9:104142620-104143459:+|1.110181688878976|0.2514137796431354|2.14|63.0|37|2|anti-sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.9420166015625	3	451.941973	1352.80409	-0.56282	-0.00025436	3.1394	0.0014188	2.5766	0.0011645	451.9432961289507	50.995	2.7237	51.43	49.805	52.529	0.43505					150	65	3	0	0	0	0.74672	1	5031	5031		22.781	2.4664	1	757900	+		34996	29658	23186	23195	39928	39928					0.14179827125030897
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.277587890625	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.69624	3	7669	7669;7733;7797		40.778	7.9657	1	1311100			34997	2784	23187	23196	39929;39930;39931	39929					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.277587890625	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.71772	1	8253	8253		39.253	6.4404	1	4644500			34998	2784	23187	23196	39932	39932					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.277587890625	2	479.277441	956.540328	-1.0476	-0.00050211	1.2406	0.00059461	0.193	9.2502E-05	479.27794521109934	87.608	3.0549	87.608	87.076	90.13	0					149	70	3	0	0	0	0.76255	1	8360	8360		35.618	5.1146	1	645930			34999	2784	23187	23196	39933	39933					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2773132324219	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.51592	2	8093	7955;8093		51.193	8.7589	1	1929800			35000	2784	23187	23196	39934;39935	39935					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2776184082031	2	479.277441	956.540328	-0.098244	-4.7086E-05	0.019792	9.4859E-06	-0.078452	-3.76E-05	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.69624	3	8669	8669;8706;8754		40.778	5.1599	1	6799600			35001	2784	23187	23196	39936;39937;39938	39936					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2773742675781	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.73802	2	8788	8788;8970		37.812	5.6293	1	7289200			35002	2784	23187	23196	39939;39940	39939					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2775573730469	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.77244	2	8039	8039;8122		32.812	3.6629	1	2046100			35003	2784	23187	23196	39941;39942	39941					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2774658203125	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.64922	5	8797	8364;8651;8797;8821;8906		44.117	12.587	1	7040000			35004	2784	23187	23196	39943;39944;39945;39946;39947	39945					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774963378906	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.77244	2	8314	8314;8526		32.812	3.6424	1	7438100			35005	2784	23187	23196	39948;39949	39948					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27752685546875	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.73802	2	8150	8150;8512		37.812	7.3079	1	6593200			35006	2784	23187	23196	39950;39951	39950					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774963378906	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.7932	1	7915	7915		24.519	1.4767	1	1785900			35007	2784	23187	23196	39952	39952					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27752685546875	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.69624	4	8229	8008;8229;8459;8507		40.778	7.9657	1	6441000			35008	2784	23187	23196	39953;39954;39955;39956	39954					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.277587890625	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.78058	1	9656	9656		30.504	1.3541	1	5642300			35009	2784	23187	23196	39957	39957					0.060319920203255606
LTGPRKQSA	9	Unmodified	_LTGPRKQSA_					0	0	0		nc|ENSG00000114656|Q9ULG3-2|CFAP92;nc|ENSG00000114656|Q9ULG3|CFAP92;ENSG00000114656|ENST00000645291|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	nc|ENSG00000114656|Q9ULG3-2|CFAP92	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2773742675781	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.64922	4	9689	9656;9665;9677;9689		44.117	12.956	1	6350300			35010	2784	23187	23196	39958;39959;39960;39961	39961					0.060319920203255606
LTGRLDGFKPK	11	Unmodified	_LTGRLDGFKPK_					0	0	0		nc|ENSG00000078177|Q86UW6-2|N4BP2;ENSG00000078177|ENST00000261435|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.24334716796875	3	411.243429	1230.70846	3.0375	0.0012491	-2.2135	-0.00091027	0.824	0.00033886	411.57688383383635	102.95	0.67481	103.25	103.07	103.74	0.29865					29	20	2	0	0	0	0.70278	1	12566	12566		31.068	2.4914	1	2406800			35011	1393	23188	23197	39962	39962					0.10233054214131698
LTGRPKQN	8	Unmodified	_LTGRPKQN_					0	0	0			REV__ENSG00000144909|ENST00000296220|OSBPL11	REV__ENSG00000144909|ENST00000296220|OSBPL11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2636413574219	2	457.264333	912.514114	0.21557	9.8573E-05	-0.19878	-9.0895E-05	0.016791	7.678E-06	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.87479	1	7998	7998		30.504	0	1	1366100	+		35012	19918	23189	23198	39963	39963					0.05435722848858404
LTGRPKQN	8	Unmodified	_LTGRPKQN_					0	0	0			REV__ENSG00000144909|ENST00000296220|OSBPL11	REV__ENSG00000144909|ENST00000296220|OSBPL11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2640380859375	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.89962	1	9676	9676		38.806	3.1879	1	4402400	+		35013	19918	23189	23198	39964	39964					0.05435722848858404
LTGRPPAPLP	10	Unmodified	_LTGRPPAPLP_					0	0	0			REV__nc|ENSG00000106823|O94769-2|ECM2	REV__nc|ENSG00000106823|O94769-2|ECM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80377197265625	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.86471	1	8240	8240		30.318	0.47618	1	1874600	+		35014	17633	23190	23199	39965	39965					0.08902039576844345
LTGRPPAPLP	10	Unmodified	_LTGRPPAPLP_					0	0	0			REV__nc|ENSG00000106823|O94769-2|ECM2	REV__nc|ENSG00000106823|O94769-2|ECM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8033752441406	2	509.805834	1017.59712	-0.38176	-0.00019462	-3.8277	-0.0019514	-4.2095	-0.002146	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.82886	1	8269	8269		37.812	0	1	948010	+		35015	17633	23190	23199	39966	39966					0.08902039576844345
LTGSESPIV	9	Unmodified	_LTGSESPIV_					0	0	0		ENST00000585864.1_1_18:56807180-56819918:+|nuORF;ENSG00000166562|ENST00000587834|SEC11C	ENST00000585864.1_1_18:56807180-56819918:+|nuORF	ENST00000585864.1_1_18:56807180-56819918:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7452087402344	2	451.745108	901.475663	-0.61831	-0.00027932	2.3255	0.0010506	1.7072	0.00077123	451.7459480558959	34.844	1.0293	34.787	34.355	35.384	-0.056385					46	23	3	0	0	0	0.58151	1	2232	2232		47.916	0	1	301340			35016	6209	23191	23200	39967	39967					0.020983724236771195
LTGTLSKN	8	Unmodified	_LTGTLSKN_					0	0	0			REV__nc|ENSG00000139505|Q9Y217-2|MTMR6	REV__nc|ENSG00000139505|Q9Y217-2|MTMR6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2395935058594	2	417.239993	832.465432	-1.799	-0.00075061	-0.033577	-1.401E-05	-1.8326	-0.00076462	417.2397355139431	88.204	2.4422	88.405	87.8	90.242	0.20115					131	57	3	0	0	0	0.91977	1	8780	8780		45.952	7.1458	1	1231700	+		35017	19542	23192	23201	39968	39968					0.04249809489101608
LTGTLSKN	8	Unmodified	_LTGTLSKN_					0	0	0			REV__nc|ENSG00000139505|Q9Y217-2|MTMR6	REV__nc|ENSG00000139505|Q9Y217-2|MTMR6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2398681640625	2	417.239993	832.465432	-1.05	-0.00043811	-0.95536	-0.00039861	-2.0054	-0.00083672	417.2394458180228	88.189	1.3218	88.652	88.27	89.592	0.46312					60	32	3	0	0	0	0.87922	1	10436	10436		31.955	6.3808	1	1050800	+		35018	19542	23192	23201	39969	39969					0.04249809489101608
LTGVEFVPY	9	Unmodified	_LTGVEFVPY_					0	0	0			REV__ENST00000462591.1_1_1:114440257-114440542:-|nuORF	REV__ENST00000462591.1_1_1:114440257-114440542:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.769287109375	2	512.771126	1023.5277	-0.42239	-0.00021659	-3.5289	-0.0018095	-3.9513	-0.0020261	512.7691224162727	38.465	0.72042	38.476	38.195	38.915	0.010708					46	20	3	0	0	0	0.74721	1	2283	2283		37.159	2.0071	1	407540	+		35019	27059	23193	23202	39970	39970					0.016875358374363714
LTHAHAPP	8	Unmodified	_LTHAHAPP_					0	0	0		ENST00000477457.1_1_2:238455116-238462232:+|nuORF	ENST00000477457.1_1_2:238455116-238462232:+|nuORF	ENST00000477457.1_1_2:238455116-238462232:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59271240234375	2	422.22722	842.439886	-0.68929	-0.00029104	3.2528	0.0013734	2.5635	0.0010824	422.2285351899873	53.748	2.0875	53.723	52.745	54.833	-0.024754					97	56	3	0	0	0	0.4196	1	4885	4885		29.842	0	1	348010			35020	12356	23194	23203	39971	39971					0.012363797573129887
LTHAHAPP	8	Unmodified	_LTHAHAPP_					0	0	0		ENST00000477457.1_1_2:238455116-238462232:+|nuORF	ENST00000477457.1_1_2:238455116-238462232:+|nuORF	ENST00000477457.1_1_2:238455116-238462232:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5924987792969	2	422.22722	842.439886	-0.52509	-0.00022171	3.1276	0.0013205	2.6025	0.0010988	422.2285082175236	50.046	0.46769	49.954	49.595	50.063	-0.091797					14	10	2	0	0	0	0.4196	1	3893	3893		8.2313	0	1	49194			35021	12356	23194	23203	39972	39972					0.012363797573129887
LTHFRGLP	8	Unmodified	_LTHFRGLP_					0	0	0		ENST00000372088.6_1_10:86274209-86274326:+|nuORF	ENST00000372088.6_1_10:86274209-86274326:+|nuORF	ENST00000372088.6_1_10:86274209-86274326:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7689514160156	2	470.771794	939.529036	-1.5754	-0.00074164	-3.8773	-0.0018253	-5.4527	-0.002567	470.7698262584641	54.969	1.6886	54.969	54.144	55.833	0					124	54	3	0	0	0	0.92457	1	4669	4669		47.916	0.25827	1	1398900			35022	10689	23195	23204	39973	39973					0.0568521471685699
LTHLDGGECH	10	Unmodified	_LTHLDGGECH_					0	0	0			REV__nc|ENSG00000129116|Q8WX93|PALLD	REV__nc|ENSG00000129116|Q8WX93|PALLD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.2420654296875	2	541.240198	1080.46584	0.94998	0.00051416	2.5591	0.0013851	3.5091	0.0018993	541.2414604318147	20.892	0.41283	20.828	20.578	20.991	-0.064058					31	18	2	0	0	0	0.74274	1	541	541		42.396	10.441	1	49268	+		35023	29835	23196	23205	39974	39974					-0.0711713885334575
LTHPLFIGKEI	11	Unmodified	_LTHPLFIGKEI_					0	0	0			REV__chr8:100008569-100047463|16|15.5|0.25|5.97|-|1|RGS22,RGS22|1	REV__chr8:100008569-100047463|16|15.5|0.25|5.97|-|1|RGS22,RGS22|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8787841796875	2	634.374081	1266.73361	2.1873	0.0013876	3.021	0.0019164	5.2083	0.003304	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.60058	1	13294	13294		44.377	9.199	1	6886400	+		35024	15915	23197	23206	39975	39975					0.11091109016706469
LTHPRLNRL	9	Unmodified	_LTHPRLNRL_					0	0	0			REV__ENSG00000139304|ENST00000644991|PTPRQ	REV__ENSG00000139304|ENST00000644991|PTPRQ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3407592773438	2	560.340907	1118.66726	-1.4185	-0.00079484	0.46581	0.00026101	-0.95269	-0.00053383	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.76764	1	12558	12558		34.173	5.0025	1	4071000	+		35025	19532	23198	23207	39976	39976					0.11267337965318802
LTIEDRFPS	9	Unmodified	_LTIEDRFPS_					0	0	0			REV__nc|ENSG00000105737|Q16478-2|GRIK5	REV__nc|ENSG00000105737|Q16478-2|GRIK5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	539.280029296875	2	539.282389	1076.55022	0.18795	0.00010136	-1.6522	-0.000891	-1.4642	-0.00078964	539.2813757758174	40.859	0.81373	40.814	40.583	41.397	-0.045467					53	28	3	0	0	0	0.58668	1	2628	2628		47.657	1.6851	1	680430	+		35026	17566	23199	23208	39977	39977					0.01501135235048423
LTIFTLLCKR	10	Unmodified	_LTIFTLLCKR_					0	0	0		chr7:64820323-64831451|50|11.76|0.69|4.09|+|2|TE_info:L1MB2,L1MB2_dup3458,L1,LINE,donor,-,64820082,64820323|None,ZNF138|1	chr7:64820323-64831451|50|11.76|0.69|4.09|+|2|TE_info:L1MB2,L1MB2_dup3458,L1,LINE,donor,-,64820082,64820323|None,ZNF138|1	chr7:64820323-64831451|50|11.76|0.69|4.09|+|2|TE_info:L1MB2,L1MB2_dup3458,L1,LINE,donor,-,64820082,64820323|None,ZNF138|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3657836914062	2	604.365201	1206.71585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.53	1	116.51	116.01	117.01	-0.02433								0	0	0	0.45132	1	12906	12906		15.642	0	1				35027	506	23200	23209	39978	39978					0.12076070490184065
LTIGAPVDAL	10	Unmodified	_LTIGAPVDAL_					0	0	0			REV__ENST00000507384.1_2_5:180222720-180229749:-|nuORF	REV__ENST00000507384.1_2_5:180222720-180229749:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2864074707031	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.124	1	72.254	71.754	72.754	0.1301								0	0	0	0.45132	1	6604	6604		35.618	7.736	1		+		35028	27904	23201	23210	39979	39979					0.06871224728752168
LTILPIDQV	9	Unmodified	_LTILPIDQV_					0	0	0		nc|ENSG00000187678|Q9C004-2|SPRY4;ENSG00000187678|ENST00000434127|SPRY4	nc|ENSG00000187678|Q9C004-2|SPRY4	nc|ENSG00000187678|Q9C004-2|SPRY4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30767822265625	2	506.307875	1010.6012	0.3191	0.00016156	2.0004	0.0010128	2.3195	0.0011744	506.3087607672274	46.383	1.7392	46.421	45.728	47.467	0.038181					61	47	2	0	0	0	0.78983	1	3433	3433		27.882	1.1893	1	157780			35029	7869	23202	23211	39980	39980					0.09632084279905939
LTIMGDGLII	10	Unmodified	_LTIMGDGLII_					0	0	0			REV__ENSG00000164161|ENST00000296575|HHIP	REV__ENSG00000164161|ENST00000296575|HHIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3032836914062	2	523.301736	1044.58892	1.4247	0.00074556	1.9478	0.0010193	3.3725	0.0017648	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.8608	1	8969	8969		34.173	3.6689	1	3882100	+		35030	21040	23203	23212	39981	39981					0.06840724545236299
LTIMGDGLII	10	Unmodified	_LTIMGDGLII_					0	0	0			REV__ENSG00000164161|ENST00000296575|HHIP	REV__ENSG00000164161|ENST00000296575|HHIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.303466796875	2	523.301736	1044.58892	0.60955	0.00031898	2.9734	0.001556	3.583	0.001875	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.8608	1	10154	10154		34.173	5.023	1	4023800	+		35031	21040	23203	23212	39982	39982					0.06840724545236299
LTIPKIVE	8	Unmodified	_LTIPKIVE_					0	0	0			REV__ENSG00000221866|ENST00000321063|PLXNA4	REV__ENSG00000221866|ENST00000321063|PLXNA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79302978515625	2	456.791861	911.569169	0.10619	4.8505E-05	2.6551	0.0012128	2.7613	0.0012614	456.7929673289598	38.995	1.2001	38.965	38.494	39.694	-0.03027					96	27	4	0	0	0	0.84341	1	2635	2635		24.203	0	1	2198500	+		35032	23709	23204	23213	39983	39983					0.10984716596760791
LTIPKLQPH	9	Unmodified	_LTIPKLQPH_					0	0	0		chr10:89285264-89286872|20|25.55|0.0|21.28|+|0|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|6;chr10:89285264-89286796|15|22.93|0.0|21.13|+|1|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286796,89288116|IFIT2,None|9	chr10:89285264-89286872|20|25.55|0.0|21.28|+|0|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|6	chr10:89285264-89286872|20|25.55|0.0|21.28|+|0|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8194580078125	2	523.821484	1045.62842	2.3131	0.0012117	-3.9064	-0.0020462	-1.5932	-0.00083457	523.8194058340142	104.59	1.4884	104.78	103.64	105.13	0.18888					65	37	2	0	0	0	0.76764	1	12726	12726		34.173	8.7224	1	239400			35033	88	23205	23214	39984	39984					0.1074261261094307
LTIPTELN	8	Unmodified	_LTIPTELN_					0	0	0			REV__ENSG00000152818|ENST00000367545|UTRN	REV__ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7537536621094	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.89043	1	8075	8075		35.618	2.1253	1	394230	+		35034	20318	23206	23215	39985	39985					0.042629628033296285
LTIQEALTY	9	Unmodified	_LTIQEALTY_					0	0	0		ENSG00000174175|ENST00000263686|SELP	ENSG00000174175|ENST00000263686|SELP	ENSG00000174175|ENST00000263686|SELP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2741088867188	2	526.28714	1050.55973	0.53993	0.00028416	-0.17288	-9.0983E-05	0.36705	0.00019317	526.287139356981	55.593	0.57973	56.161	55.783	56.363	0.56836					25	13	3	0	0	0	0.16964	1	5700	5700		90.37	27.064	1	358440			35035	6913	23207	23216	39986	39986					0.03646903520575506
LTISPAYLL	9	Unmodified	_LTISPAYLL_					0	0	0		ENSG00000111670|ENST00000299314|GNPTAB;nc|ENSG00000111670|Q3T906-2|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7966003417969	2	495.797143	989.579734	3.6416	0.0018055	-3.7269	-0.0018478	-0.085301	-4.2292E-05	495.7951678077777	105.11	0.93385	105.34	105.01	105.95	0.2268					55	22	3	0	0	0	0.5393	1	12898	12898		50.025	7.5501	1	568440			35036	2599	23208	23217	39987	39987					0.0845269925117691
LTISSLPKP	9	Unmodified	_LTISSLPKP_					0	0	0			REV__ENST00000376511.6_1_6:30569009-30569351:-|nuORF	REV__ENST00000376511.6_1_6:30569009-30569351:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.29437255859375	2	478.294768	954.574983	-0.40439	-0.00019342	0.2002	9.5756E-05	-0.20419	-9.7663E-05	478.294703669349	58.747	0.58649	59.139	58.814	59.401	0.39209					25	13	2	0	0	0	0.19818	1	6172	6172		74.255	2.3776	1	485810	+		35037	25837	23209	23218	39988	39988					0.09587815108420727
LTISSLPKP	9	Unmodified	_LTISSLPKP_					0	0	0			REV__ENST00000376511.6_1_6:30569009-30569351:-|nuORF	REV__ENST00000376511.6_1_6:30569009-30569351:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	478.294768	954.574983	-0.9322	-0.00044587	0.86431	0.00041339	-0.067892	-3.2473E-05	478.2951252276294	58.614	0.534	59.167	58.922	59.456	0.55323	0.013938	0.00033809	NaN	74.255	24	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	545710	+		35038	25837	23209	23218							0.09587815108420727
LTITRAKVDKI	11	Unmodified	_LTITRAKVDKI_					0	0	0			REV__nc|ENSG00000171587|O60469-2|DSCAM	REV__nc|ENSG00000171587|O60469-2|DSCAM	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	629.3453369140625	2	629.398087	1256.78162	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.225	1	44.233	43.733	44.733	0.0084534								0	0	0	0.56276	1	3104	3104		33.922	12.236	1		+		35039	21753	23210	23219	39989	39989					0.163501829367533
LTIVSLST	8	Unmodified	_LTIVSLST_					0	0	0		ENST00000462733.5_1_17:17919373-17919508:-|nuORF	ENST00000462733.5_1_17:17919373-17919508:-|nuORF	ENST00000462733.5_1_17:17919373-17919508:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2523193359375	2	417.252569	832.490584	0.14587	6.0863E-05	1.2459	0.00051986	1.3918	0.00058073	417.25289166109235	35.368	1.357	35.474	35.11	36.467	0.10604					60	43	2	0	0	0	0.79929	1	1933	1933		18.324	3.6603	1	170260			35040	12049	23211	23220	39990	39990					0.06763864291679056
LTIYDRLQ	8	Unmodified	_LTIYDRLQ_					0	0	0			REV__ENSG00000175595|ENST00000311895|ERCC4	REV__ENSG00000175595|ENST00000311895|ERCC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.2864990234375	2	511.287474	1020.5604	0.36299	0.00018559	-1.6305	-0.00083365	-1.2675	-0.00064806	511.28657650841876	42.002	2.0595	41.971	41.461	43.521	-0.030987					111	49	5	0	0	0	0.12376	3	3108	3076;3086;3108		115.46	12.567	1	6140800	+		35041	22076	23212	23221	39991;39992;39993	39993					0.05093742960275449
LTIYDRLQ	8	Unmodified	_LTIYDRLQ_					0	0	0			REV__ENSG00000175595|ENST00000311895|ERCC4	REV__ENSG00000175595|ENST00000311895|ERCC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2866516113281	2	511.287474	1020.5604	-0.92708	-0.000474	-0.33784	-0.00017274	-1.2649	-0.00064674	511.2872429876972	41.91	2.375	41.872	41.45	43.825	-0.038223					133	56	5	0	0	0	0.48059	2	3199	3199;3250		76.774	2.5191	1	7049200	+		35042	22076	23212	23221	39994;39995	39994					0.05093742960275449
LTIYDRLQ	8	Unmodified	_LTIYDRLQ_					0	0	0			REV__ENSG00000175595|ENST00000311895|ERCC4	REV__ENSG00000175595|ENST00000311895|ERCC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.286865234375	2	511.287474	1020.5604	-1.2853	-0.00065715	-0.086664	-4.431E-05	-1.3719	-0.00070146	511.2874104215347	41.926	2.0437	41.929	41.503	43.546	0.0034142					109	48	4	0	0	0	0.38363	1	3119	3119		90.777	0.40684	1	7262400	+		35043	22076	23212	23221	39996	39996					0.05093742960275449
LTKEQLKQI	9	Unmodified	_LTKEQLKQI_					0	0	0		nc|ENSG00000108523|Q9H6Y7-2|RNF167;ENSG00000108523|ENST00000262482|RNF167	nc|ENSG00000108523|Q9H6Y7-2|RNF167	nc|ENSG00000108523|Q9H6Y7-2|RNF167	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.836669921875	2	550.837331	1099.66011	0.9212	0.00050743	-0.61222	-0.00033723	0.30898	0.0001702	550.8367504291579	24.488	0.54977	24.445	24.112	24.662	-0.043221					31	11	3	0	0	0	0.76764	1	895	895		34.173	1.3601	1	65876			35044	2414	23213	23222	39997	39997					0.11426560574227551
LTKKRGLSD	9	Unmodified	_LTKKRGLSD_					0	0	0			REV__ENSG00000162402|ENST00000294383|USP24	REV__ENSG00000162402|ENST00000294383|USP24	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.3062438964844	2	509.306198	1016.59784	-0.80877	-0.00041191	0.15942	8.1194E-05	-0.64935	-0.00033072	509.30614096875837	93.406	1.6722	93.406	92.938	94.61	0					114	38	4	0	0	0	0.64555	1	9298	9298		44.377	5.571	1	1703100	+		35045	20809	23214	23223	39998	39998					0.09020834225896124
LTKLFQKLD	9	Unmodified	_LTKLFQKLD_					0	0	0			REV__ENSG00000164332|ENST00000296786|UBLCP1	REV__ENSG00000164332|ENST00000296786|UBLCP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.332275390625	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.71772	1	9785	9785		39.253	5.0803	1	2365500	+		35046	21072	23215	23224	39999	39999					0.10615462062560255
LTKLTKRAHK	10	Unmodified	_LTKLTKRAHK_					0	0	0			REV__ENSG00000099821|ENST00000588649|POLRMT	REV__ENSG00000099821|ENST00000588649|POLRMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.380859375	2	598.385314	1194.75608	-1.7339	-0.0010376	-4.4788	-0.00268	-6.2127	-0.0037176	598.3825106466512	40.786	0.41102	41.178	40.968	41.379	0.39209					40	11	4	0	0	0	0.8651	1	3545	3545		25.574	2.0514	1	3668000	+		35047	17107	23216	23225	40000	40000					0.16648753204981404
LTKLVHMGR	9	Unmodified	_LTKLVHMGR_					0	0	0		ENSG00000149256|ENST00000278550|TENM4	ENSG00000149256|ENST00000278550|TENM4	ENSG00000149256|ENST00000278550|TENM4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	527.305908203125	2	527.813136	1053.61172	-0.086679	-4.575E-05	2.3267	0.0012281	2.24	0.0011823	527.8146811654162	99.28	0.28878	99.503	99.367	99.656	0.22262					11	6	3	0	0	0	0.20789	1	10355	10355		19.997	0	1	33423			35048	5009	23217	23226	40001	40001					0.08705788453335117
LTKPKEKPLAS	11	Unmodified	_LTKPKEKPLAS_					0	0	0			REV__nc|ENSG00000175267|A6NCI4-2|VWA3A	REV__nc|ENSG00000175267|A6NCI4-2|VWA3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	606.3690795898438	2	606.371538	1210.72852	0.84903	0.00051483	-4.1925	-0.0025422	-3.3434	-0.0020274	606.3688643769136	94.076	3.4223	94.237	93.324	96.746	0.16118					202	81	3	0	0	0	0.75164	1	9616	9616		21.686	0.73882	1	934800	+		35049	22055	23218	23227	40002	40002					0.13158805154080255
LTKPLIKTPSN	11	Unmodified	_LTKPLIKTPSN_					0	0	0			REV__ENSG00000114126|ENST00000489671|TFDP2	REV__ENSG00000114126|ENST00000489671|TFDP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	606.3712768554688	2	606.371538	1210.72852	-0.28087	-0.00017031	-2.9829	-0.0018087	-3.2638	-0.0019791	606.369636454931	94.737	2.9757	94.737	93.326	96.302	0					126	69	2	0	0	0	0.75164	1	9348	9348		21.686	0.8486	1	318720	+		35050	18033	23219	23228	40003	40003					0.13158805154102993
LTKPPRPPK	9	Unmodified	_LTKPPRPPK_					0	0	0			REV__ENSG00000197724|ENST00000359246|PHF2	REV__ENSG00000197724|ENST00000359246|PHF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7590942382812	2	517.329476	1032.6444	-0.63768	-0.00032989	0.45267	0.00023418	-0.18501	-9.5713E-05	517.3294577079674	30.315	0.61901	30.344	30.052	30.671	0.028618					30	13	3	0	0	0	0.20789	1	2009	2009		10.866	0	1	209460	+		35051	23264	23220	23229	40004	40004					0.129383188478414
LTKRKLHRE	9	Unmodified	_LTKRKLHRE_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8673095703125	2	590.867289	1179.72002	0.84845	0.00050132	-2.4301	-0.0014359	-1.5816	-0.00093454	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.78536	1	11092	11092		29.15	0	1	94771000			35052	7573	23221	23230	40005	40005					0.13735296028107769
LTKRLTEAN	9	Unmodified	_LTKRLTEAN_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3045043945312	2	523.303655	1044.59276	0.69703	0.00036476	-1.0638	-0.00055667	-0.36673	-0.00019191	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.78983	1	8321	8321		27.882	0	1	3801600			35053	1487	23222	23231	40006	40006					0.07224530363282611
LTKRPANSI	9	Unmodified	_LTKRPANSI_					0	0	0		ENST00000360547.9_1_15:81592605-81592662:+|nuORF	ENST00000360547.9_1_15:81592605-81592662:+|nuORF	ENST00000360547.9_1_15:81592605-81592662:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.798828125	2	500.300916	998.587279	0.74628	0.00037337	-3.1647	-0.0015833	-2.4184	-0.0012099	500.7972119176855	94.338	1.2646	94.502	94.087	95.351	0.16308					81	30	5	0	0	0	0.71772	1	9635	9635		39.253	3.6345	1	626530			35054	10448	23223	23232	40007	40007					0.08792851571456595
LTKSLKGKN	9	Unmodified	_LTKSLKGKN_					0	0	0		nc|ENSG00000082269|Q9P2D6-4|FAM135A;ENSG00000082269|ENST00000418814|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.8113708496094	2	494.811116	987.60768	-0.073772	-3.6503E-05	3.3768	0.0016709	3.303	0.0016344	494.81248076616197	108.78	0.78468	108.73	108.35	109.14	-0.049324					63	32	2	0	0	0	0.77696	1	11862	11862		31.53	3.6476	1	858000			35055	1483	23224	23233	40008	40008					0.11338022231291234
LTKSPRHLSKT	11	Unmodified	_LTKSPRHLSKT_					0	0	0		ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3761596679688	2	634.377686	1266.74082	-0.13802	-8.7559E-05	-0.66981	-0.00042491	-0.80783	-0.00051247	634.3770517234923	117.28	0.25537	117.21	117	117.26	-0.07531					24	8	3	0	0	0	0.74763	1	12570	12570		22.58	1.6327	1	1742800			35056	11712	23225	23234	40009	40009					0.11811841617122809
LTKSPRHLSKT	11	Unmodified	_LTKSPRHLSKT_					0	0	0		ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3767700195312	2	634.377686	1266.74082	-0.13799	-8.754E-05	-0.83355	-0.00052878	-0.97154	-0.00061633	634.3769981917211	117.62	0.35755	117.55	117.34	117.69	-0.07531					32	12	3	0	0	0	0.68532	1	12617	12617		33.922	2.3918	1	1153300			35057	11712	23225	23234	40010	40010					0.11811841617122809
LTKSPRHLSKT	11	Unmodified	_LTKSPRHLSKT_					0	0	0		ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3761596679688	2	634.377686	1266.74082	-0.13787	-8.7463E-05	-0.67638	-0.00042908	-0.81426	-0.00051655	634.377061455115	118.49	0.49898	118.42	118.19	118.69	-0.07531					48	18	4	0	0	0	0.74763	1	12697	12697		22.58	3.4761	1	1728300			35058	11712	23225	23234	40011	40011					0.11811841617122809
LTKSPRHLSKT	11	Unmodified	_LTKSPRHLSKT_					0	0	0		ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3757934570312	2	634.377686	1266.74082	1.3188	0.00083664	-1.7871	-0.0011337	-0.46828	-0.00029707	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.7144	4	13094	12548;12931;12940;13094		29.17	4.0441	1	12917000			35059	11712	23225	23234	40012;40013;40014;40015	40015					0.11811841617122809
LTKSPRHLSKT	11	Unmodified	_LTKSPRHLSKT_					0	0	0		ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3764038085938	2	634.377686	1266.74082	1.4896	0.00094496	-2.6193	-0.0016616	-1.1297	-0.00071666	634.3759273521912	119	0.20064	119.09	119.04	119.24	0.087753					12	7	2	0	0	0	0.72106	1	12544	12544		28.081	2.5074	1	2529600			35060	11712	23225	23234	40016	40016					0.11811841617122809
LTKSPRHLSKT	11	Unmodified	_LTKSPRHLSKT_					0	0	0		ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.376220703125	2	634.377686	1266.74082	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.28	1	118.36	117.86	118.86	0.087753								0	0	0	0.56276	1	12483	12483		27.047	1.4733	1				35061	11712	23225	23234	40017	40017					0.11811841617122809
LTKSPRHLSKT	11	Unmodified	_LTKSPRHLSKT_					0	0	0		ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8773803710938	2	634.377686	1266.74082	0.93365	0.00059228	-1.959	-0.0012427	-1.0253	-0.00065045	634.3762780737788	111.26	0.49553	111.33	110.97	111.47	0.069542					38	19	2	0	0	0	0.75544	1	11956	11956		20.837	0	1	1383700			35062	11712	23225	23234	40018	40018					0.11811841617122809
LTKSPRHLSKT	11	Unmodified	_LTKSPRHLSKT_					0	0	0		ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.375732421875	2	634.377686	1266.74082	0.93394	0.00059247	-2.1331	-0.0013532	-1.1991	-0.00076069	634.3760615979032	111.89	0.64575	111.96	111.47	112.12	0.069542					57	19	4	0	0	0	0.72739	1	12026	12026		27.047	0.3544	1	7169800			35063	11712	23225	23234	40019	40019					0.11811841617122809
LTKSPRHLSKT	11	Unmodified	_LTKSPRHLSKT_					0	0	0		ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3766479492188	2	634.377686	1266.74082	2.1873	0.0013876	-2.6623	-0.0016889	-0.47502	-0.00030134	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.68532	1	13359	13359		33.922	2.2874	1	6886400			35064	11712	23225	23234	40020	40020					0.11811841617122809
LTKSPRHLSKT	11	Unmodified	_LTKSPRHLSKT_					0	0	0		ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	634.377686	1266.74082	2.8037	0.0017786	-3.0735	-0.0019497	-0.26973	-0.00017111	634.37565379164	117.42	3.2251	117.4	116.75	119.97	-0.02433	-0.074027	-0.00074458	NaN	33.922	174	126	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254750			35065	11712	23225	23234							0.11811841617122809
LTKVLQAMA	9	Unmodified	_LTKVLQAMA_					0	0	0			REV__nc|ENSG00000241322|O95170-2|FBXW10B	REV__nc|ENSG00000241322|O95170-2|FBXW10B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7912902832031	2	487.788795	973.563038	0.54993	0.00026825	3.015	0.0014707	3.565	0.001739	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.78983	1	8218	8218		27.882	4.8398	1	633420	+		35066	21786	23226	23235	40021	40021					0.07519875093578321
LTLAVSPPA	9	Unmodified	_LTLAVSPPA_					0	0	0		ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2577819824219	2	434.760561	867.506569	0.61637	0.00026798	-4.3451	-0.0018891	-3.7288	-0.0016211	434.7589702890546	87.554	3.2021	87.703	86.279	89.481	0.14956					123	75	2	0	0	0	0.78536	1	8615	8615		29.15	3.6994	1	1373100			35067	12882	23227	23236	40022	40022					0.06751570528570028
LTLAVSPPA	9	Unmodified	_LTLAVSPPA_					0	0	0		ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7606201171875	2	434.760561	867.506569	0.15252	6.6311E-05	1.8637	0.00081025	2.0162	0.00087656	434.760660552279	87.036	1.2069	87.482	87.061	88.268	0.44628					53	28	4	0	0	0	0.69914	3	10282	10199;10234;10282		40.573	10.069	1	1015900			35068	12882	23227	23236	40023;40024;40025	40025					0.06751570528570028
LTLAVSPPA	9	Unmodified	_LTLAVSPPA_					0	0	0		ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7619323730469	2	434.760561	867.506569	-0.5629	-0.00024473	1.0676	0.00046413	0.50466	0.00021941	434.76067973092415	87.168	2.0805	87.623	86.978	89.058	0.45429					87	50	3	0	0	0	0.78058	1	10260	10260		30.504	5.0535	1	1032200			35069	12882	23227	23236	40026	40026					0.06751570528570028
LTLCFLPAIP	10	Unmodified	_LTLCFLPAIP_					0	0	0		ENST00000157600.7_2_3:8612384-8612732:+|nuORF	ENST00000157600.7_2_3:8612384-8612732:+|nuORF	ENST00000157600.7_2_3:8612384-8612732:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.3139038085938	2	544.314646	1086.61474	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.208	1	17.129	16.629	17.629	-0.079056								0	0	0	0.45132	1	196	196		24.203	1.1603	1				35070	9080	23228	23237	40027	40027					0.0748961878746286
LTLEAALIL	9	Unmodified	_LTLEAALIL_					0	0	0		nc|ENSG00000188672|P18577-11|RHCE;ENSG00000188672|ENST00000294413|RHCE;nc|ENSG00000188672|P18577-4|RHCE;nc|ENSG00000188672|P18577-10|RHCE;nc|ENSG00000188672|P18577-3|RHCE;ENST00000527187.5_1_1:25712128-25747316:-|nuORF;nc|ENSG00000188672|P18577-6|RHCE;nc|ENSG00000188672|P18577-5|RHCE;nc|ENSG00000188672|P18577-12|RHCE;ENSG00000187010|ENST00000328664|RHD;nc|ENSG00000188672|P18577-2|RHCE;nc|ENSG00000188672|P18577-13|RHCE;nc|ENSG00000188672|P18577-7|RHCE;nc|ENSG00000188672|P18577-8|RHCE;nc|ENSG00000188672|P18577-9|RHCE;nc|ENSG00000188672|P18577-14|RHCE;nc|ENSG00000187010|Q02161-2|RHD;nc|ENSG00000187010|Q02161-6|RHD;ENST00000564398.5_1_1:25598999-25633293:+|nuORF;nc|ENSG00000187010|Q02161-3|RHD;nc|ENSG00000187010|Q02161-5|RHD;nc|ENSG00000187010|Q02161-4|RHD	nc|ENSG00000188672|P18577-11|RHCE	nc|ENSG00000188672|P18577-11|RHCE	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8055419921875	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.77546	2	2608	2608;2657		31.955	2.8053	1	336090			35071	7947	23229	23238	40028;40029	40028					0.11580985768239316
LTLEAALIL	9	Unmodified	_LTLEAALIL_					0	0	0		nc|ENSG00000188672|P18577-11|RHCE;ENSG00000188672|ENST00000294413|RHCE;nc|ENSG00000188672|P18577-4|RHCE;nc|ENSG00000188672|P18577-10|RHCE;nc|ENSG00000188672|P18577-3|RHCE;ENST00000527187.5_1_1:25712128-25747316:-|nuORF;nc|ENSG00000188672|P18577-6|RHCE;nc|ENSG00000188672|P18577-5|RHCE;nc|ENSG00000188672|P18577-12|RHCE;ENSG00000187010|ENST00000328664|RHD;nc|ENSG00000188672|P18577-2|RHCE;nc|ENSG00000188672|P18577-13|RHCE;nc|ENSG00000188672|P18577-7|RHCE;nc|ENSG00000188672|P18577-8|RHCE;nc|ENSG00000188672|P18577-9|RHCE;nc|ENSG00000188672|P18577-14|RHCE;nc|ENSG00000187010|Q02161-2|RHD;nc|ENSG00000187010|Q02161-6|RHD;ENST00000564398.5_1_1:25598999-25633293:+|nuORF;nc|ENSG00000187010|Q02161-3|RHD;nc|ENSG00000187010|Q02161-5|RHD;nc|ENSG00000187010|Q02161-4|RHD	nc|ENSG00000188672|P18577-11|RHCE	nc|ENSG00000188672|P18577-11|RHCE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8050842285156	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.78058	1	2877	2877		30.504	6.3009	1	371600			35072	7947	23229	23238	40030	40030					0.11580985768239316
LTLEAALIL	9	Unmodified	_LTLEAALIL_					0	0	0		nc|ENSG00000188672|P18577-11|RHCE;ENSG00000188672|ENST00000294413|RHCE;nc|ENSG00000188672|P18577-4|RHCE;nc|ENSG00000188672|P18577-10|RHCE;nc|ENSG00000188672|P18577-3|RHCE;ENST00000527187.5_1_1:25712128-25747316:-|nuORF;nc|ENSG00000188672|P18577-6|RHCE;nc|ENSG00000188672|P18577-5|RHCE;nc|ENSG00000188672|P18577-12|RHCE;ENSG00000187010|ENST00000328664|RHD;nc|ENSG00000188672|P18577-2|RHCE;nc|ENSG00000188672|P18577-13|RHCE;nc|ENSG00000188672|P18577-7|RHCE;nc|ENSG00000188672|P18577-8|RHCE;nc|ENSG00000188672|P18577-9|RHCE;nc|ENSG00000188672|P18577-14|RHCE;nc|ENSG00000187010|Q02161-2|RHD;nc|ENSG00000187010|Q02161-6|RHD;ENST00000564398.5_1_1:25598999-25633293:+|nuORF;nc|ENSG00000187010|Q02161-3|RHD;nc|ENSG00000187010|Q02161-5|RHD;nc|ENSG00000187010|Q02161-4|RHD	nc|ENSG00000188672|P18577-11|RHCE	nc|ENSG00000188672|P18577-11|RHCE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.30657958984375	2	478.804968	955.595384	-1.2382	-0.00059286	1.4969	0.00071673	0.2587	0.00012387	478.80558529591235	40.624	1.0284	40.581	39.923	40.951	-0.042892					45	26	2	0	0	0	0.78536	1	3020	3020		29.15	1.2673	1	267990			35073	7947	23229	23238	40031	40031					0.11580985768239316
LTLEAALIL	9	Unmodified	_LTLEAALIL_					0	0	0		nc|ENSG00000188672|P18577-11|RHCE;ENSG00000188672|ENST00000294413|RHCE;nc|ENSG00000188672|P18577-4|RHCE;nc|ENSG00000188672|P18577-10|RHCE;nc|ENSG00000188672|P18577-3|RHCE;ENST00000527187.5_1_1:25712128-25747316:-|nuORF;nc|ENSG00000188672|P18577-6|RHCE;nc|ENSG00000188672|P18577-5|RHCE;nc|ENSG00000188672|P18577-12|RHCE;ENSG00000187010|ENST00000328664|RHD;nc|ENSG00000188672|P18577-2|RHCE;nc|ENSG00000188672|P18577-13|RHCE;nc|ENSG00000188672|P18577-7|RHCE;nc|ENSG00000188672|P18577-8|RHCE;nc|ENSG00000188672|P18577-9|RHCE;nc|ENSG00000188672|P18577-14|RHCE;nc|ENSG00000187010|Q02161-2|RHD;nc|ENSG00000187010|Q02161-6|RHD;ENST00000564398.5_1_1:25598999-25633293:+|nuORF;nc|ENSG00000187010|Q02161-3|RHD;nc|ENSG00000187010|Q02161-5|RHD;nc|ENSG00000187010|Q02161-4|RHD	nc|ENSG00000188672|P18577-11|RHCE	nc|ENSG00000188672|P18577-11|RHCE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.8056945800781	2	478.804968	955.595384	-1.0213	-0.00048898	1.9749	0.0009456	0.95365	0.00045661	478.80577246421075	40.154	1.6745	40.522	39.134	40.808	0.36797					102	40	4	0	0	0	0.7932	2	3377	3377;3387		18.324	4.5491	1	2523100			35074	7947	23229	23238	40032;40033	40032					0.11580985768239316
LTLEKLLDRTS	11	Unmodified	_LTLEKLLDRTS_					0	0	0			REV__ENSG00000142920|ENST00000294517|AZIN2	REV__ENSG00000142920|ENST00000294517|AZIN2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	644.8773803710938	2	644.877185	1287.73982	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.513	1	66.64	66.14	67.14	0.12649								0	0	0	0.56276	1	5911	5911		32.751	3.5805	1		+		35075	19761	23230	23239	40034	40034					0.10745582457548153
LTLETREY	8	Unmodified	_LTLETREY_					0	0	0			REV__ENSG00000122180|ENST00000241651|MYOG	REV__ENSG00000122180|ENST00000241651|MYOG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.7691040039062	2	512.769114	1023.52368	-0.85034	-0.00043603	0.91882	0.00047114	0.068475	3.5112E-05	512.7693435054609	38.406	0.83609	38.356	38.028	38.864	-0.050369					52	18	4	0	0	0	0.9283	1	2716	2716		49.442	5.3247	1	590040	+		35076	18482	23231	23240	40035	40035					0.012854463437065533
LTLFSGRDI	9	Unmodified	_LTLFSGRDI_					0	0	0		ENSG00000176903|ENST00000316836|PNMA1	ENSG00000176903|ENST00000316836|PNMA1	ENSG00000176903|ENST00000316836|PNMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.28466796875	2	511.287474	1020.5604	0.36299	0.00018559	-1.6305	-0.00083365	-1.2675	-0.00064806	511.28657650841876	42.002	2.0595	41.971	41.461	43.521	-0.030987					111	49	5	0	0	0	0.77696	1	3183	3183		31.53	1.0262	1	6140800			35077	7103	23232	23241	40036	40036					0.050937429602981865
LTLFSGRDI	9	Unmodified	_LTLFSGRDI_					0	0	0		ENSG00000176903|ENST00000316836|PNMA1	ENSG00000176903|ENST00000316836|PNMA1	ENSG00000176903|ENST00000316836|PNMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.2868957519531	2	511.287474	1020.5604	-1.2853	-0.00065715	-0.086664	-4.431E-05	-1.3719	-0.00070146	511.2874104215347	41.926	2.0437	41.929	41.503	43.546	0.0034142					109	48	4	0	0	0	0.14386	2	3156	3156;3207		84.916	5.4645	1	7262400			35078	7103	23232	23241	40037;40038	40037					0.050937429602981865
LTLGDYLAR	9	Unmodified	_LTLGDYLAR_					0	0	0			REV__ENSG00000133980|ENST00000256362|VRTN	REV__ENSG00000133980|ENST00000256362|VRTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2866516113281	2	511.287474	1020.5604	-0.92708	-0.000474	-0.33784	-0.00017274	-1.2649	-0.00064674	511.2872429876972	41.91	2.375	41.872	41.45	43.825	-0.038223					133	56	5	0	0	0	0.084975	1	3187	3187		96.19	5.4138	1	7049200	+		35079	19106	23233	23242	40039	40039					0.05093742960275449
LTLGDYLAR	9	Unmodified	_LTLGDYLAR_					0	0	0			REV__ENSG00000133980|ENST00000256362|VRTN	REV__ENSG00000133980|ENST00000256362|VRTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.28668212890625	2	511.287474	1020.5604	-1.2853	-0.00065715	-0.086664	-4.431E-05	-1.3719	-0.00070146	511.2874104215347	41.926	2.0437	41.929	41.503	43.546	0.0034142					109	48	4	0	0	0	0.14386	1	3108	3108		84.916	0	1	7262400	+		35080	19106	23233	23242	40040	40040					0.05093742960275449
LTLGDYLAR	9	Unmodified	_LTLGDYLAR_					0	0	0			REV__ENSG00000133980|ENST00000256362|VRTN	REV__ENSG00000133980|ENST00000256362|VRTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.28631591796875	2	511.287474	1020.5604	0.28253	0.00014445	-1.1271	-0.00057627	-0.84457	-0.00043182	511.2867408773945	41.845	0.72731	41.919	41.584	42.312	0.073418					40	17	3	0	0	0	0.64555	1	2762	2762		44.377	0.26039	1	605380	+		35081	19106	23233	23242	40041	40041					0.05093742960275449
LTLGHQFRLRL	11	Unmodified	_LTLGHQFRLRL_					0	0	0		ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10	ENSG00000086827|ENST00000200135|ZW10	ENSG00000086827|ENST00000200135|ZW10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9431457519531	3	451.941973	1352.80409	-0.67633	-0.00030566	3.3865	0.0015305	2.7102	0.0012249	451.94335598806316	53.501	2.9355	53.476	51.367	54.303	-0.024754					205	72	4	0	0	0	0.74771	1	4702	4702		22.562	2.9347	1	765750			35082	1561	23234	23243	40042	40042					0.14179827125030897
LTLGKIRLLLI	11	Unmodified	_LTLGKIRLLLI_					0	0	0		ENST00000492423.5_1_2:232651186-232653667:+|nuORF	ENST00000492423.5_1_2:232651186-232653667:+|nuORF	ENST00000492423.5_1_2:232651186-232653667:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.29754638671875	3	418.295353	1251.86423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.552	1	76.951	76.451	77.451	0.39969								0	0	0	0.56276	1	8692	8692		5.1424	1.0595	1				35083	12702	23235	23244	40043	40043					0.2483712473556352
LTLGLYIHF	9	Unmodified	_LTLGLYIHF_					0	0	0		ENSG00000160326|ENST00000371899|SLC2A6;ENST00000485978.1_1_9:136337145-136339092:-|nuORF	ENSG00000160326|ENST00000371899|SLC2A6	ENSG00000160326|ENST00000371899|SLC2A6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7672119140625	2	538.810585	1075.60662	-1.5538	-0.0008372	-2.8264	-0.0015229	-4.3802	-0.0023601	538.8087992515664	44.474	0.2384	45.318	45.222	45.461	0.84438					9	5	2	0	0	0	0.20789	1	4109	4109		26.796	4.8362	1	137260			35084	5582	23236	23245	40044	40044					0.07183807862361391
LTLGPVPK	8	Unmodified	_LTLGPVPK_					0	0	0			REV__ENST00000375754.8_1_9:93657936-93658308:+|nuORF	REV__ENST00000375754.8_1_9:93657936-93658308:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.26953125	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.87064	1	2280	2280		29.15	0.89528	1	1619400	+		35085	25820	23237	23246	40045	40045					0.0979217825380374
LTLHSSRKLGP	11	Unmodified	_LTLHSSRKLGP_					0	0	0			REV__ENST00000330539.1_1_8:37593400-37593877:-|nuORF	REV__ENST00000330539.1_1_8:37593400-37593877:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8589477539062	2	604.859129	1207.70371	0.35114	0.00021239	-1.3195	-0.00079808	-0.96832	-0.0005857	604.8582079417666	80.148	0.76048	80.564	80.168	80.928	0.41621					48	17	3	0	0	0	0.70278	1	9210	9210		28.081	19.388	1	896500	+		35086	25109	23238	23247	40046	40046					0.10816170071370834
LTLIEVRSPAL	11	Unmodified	_LTLIEVRSPAL_					0	0	0			REV__ENST00000332629.6_1_3:196281242-196281374:-|nuORF	REV__ENST00000332629.6_1_3:196281242-196281374:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	606.373291015625	2	606.371538	1210.72852	-0.28087	-0.00017031	-2.9829	-0.0018087	-3.2638	-0.0019791	606.369636454931	94.737	2.9757	94.737	93.326	96.302	0					126	69	2	0	0	0	0.72739	1	9424	9424		27.047	0.98393	1	318720	+		35087	25141	23239	23248	40047	40047					0.13158805154102993
LTLILPDLD	9	Unmodified	_LTLILPDLD_					0	0	0			REV__ENSG00000187266|ENST00000222139|EPOR	REV__ENSG00000187266|ENST00000222139|EPOR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.80322265625	2	506.799883	1011.58521	-0.0094343	-4.7813E-06	2.9516	0.0014958	2.9421	0.0014911	507.3027943337087	55.055	1.4783	55.047	54.266	55.745	-0.0077057					55	45	2	0	0	0	0.20789	1	4822	4822		23.042	0	1	120780	+		35088	22911	23240	23249	40048	40048					0.07988378043000921
LTLKAQVAYSA	11	Unmodified	_LTLKAQVAYSA_					0	0	0			REV__nc|ENSG00000186575|P35240-9|NF2	REV__nc|ENSG00000186575|P35240-9|NF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.8328857421875	2	582.834788	1163.65502	-1.3452	-0.00078404	-2.3068	-0.0013445	-3.6521	-0.0021286	582.8334573704366	94.259	3.5437	94.457	93.113	96.657	0.19827					191	84	3	0	0	0	0.7144	1	9617	9617		29.17	1.2878	1	775360	+		35089	30109	23241	23250	40049	40049					0.07974256711622729
LTLLELCV	8	Unmodified	_LTLLELCV_					0	0	0		nc|ENSG00000149516|Q96HJ5-3|MS4A3;nc|ENSG00000149516|Q96HJ5-2|MS4A3;ENSG00000149516|ENST00000278865|MS4A3	nc|ENSG00000149516|Q96HJ5-3|MS4A3	nc|ENSG00000149516|Q96HJ5-3|MS4A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.2892761230469	2	452.264622	902.514691	-1.9585	-0.00088578	3.5352	0.0015989	1.5767	0.00071308	452.2661256409436	42.934	0.74257	43.368	43.006	43.749	0.4334					24	17	2	0	0	0	0.4196	1	3866	3866		20.482	6.7065	1	183310			35090	5032	23242	23251	40050	40050					0.05953381453696238
LTLLFDATLL	10	Unmodified	_LTLLFDATLL_					0	0	0			REV__ENSG00000174946|ENST00000309180|GPR171	REV__ENSG00000174946|ENST00000309180|GPR171	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.339599609375	2	560.336633	1118.65871	3.1454	0.0017625	3.4672	0.0019428	6.6126	0.0037053	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.8488	2	13159	12913;13159		20.947	0.95016	1	151040	+		35091	22029	23243	23252	40051;40052	40052					0.10412926485469143
LTLLFLKSN	9	Unmodified	_LTLLFLKSN_					0	0	0			REV__ENSG00000198753|ENST00000361971|PLXNB3	REV__ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8272094726562	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.64555	2	10930	10761;10930		44.377	8.7589	1	30867000	+		35092	23374	23244	23253	40053;40054	40054					0.11092077033845271
LTLLGPPK	8	Unmodified	_LTLLGPPK_					0	0	0			REV__ENST00000569326.2_1_8:145724500-145725055:-|nuORF	REV__ENST00000569326.2_1_8:145724500-145725055:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7751159667969	2	419.773471	837.53239	-1.7976	-0.00075458	3.9115	0.0016419	2.1139	0.00088736	419.77504327395843	41.402	2.6775	41.816	41.329	44.007	0.4139					184	68	5	0	0	0	0.84341	1	3595	3595		24.203	2.5004	1	169320000	+		35093	28911	23245	23254	40055	40055					0.10712464770847419
LTLLGPPKPPS	11	Unmodified	_LTLLGPPKPPS_					0	0	0			REV__ENST00000569326.2_1_8:145724500-145725055:-|nuORF	REV__ENST00000569326.2_1_8:145724500-145725055:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.340087890625	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7434	1	12711	12711		23.523	1.5628	1	4071000	+		35094	28911	23246	23255	40056	40056					0.11535748579603933
LTLLIHACG	9	Unmodified	_LTLLIHACG_					0	0	0		ENSG00000179292|ENST00000327259|TMEM151A	ENSG00000179292|ENST00000327259|TMEM151A	ENSG00000179292|ENST00000327259|TMEM151A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76922607421875	2	470.767863	939.521173	0.25998	0.00012239	2.2706	0.0010689	2.5305	0.0011913	470.7687399956873	50.307	1.239	50.754	50.307	51.546	0.4476					93	29	5	0	0	0	0.49378	1	4961	4961		52.299	2.7631	1	9098100			35095	7261	23247	23256	40057	40057					0.048993194050581224
LTLLLEKVC	9	Unmodified	_LTLLLEKVC_					0	0	0			REV__ENSG00000152503|ENST00000513154|TRIM36	REV__ENSG00000152503|ENST00000513154|TRIM36	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3140258789062	2	516.312103	1030.60965	-0.68072	-0.00035146	4.0405	0.0020861	3.3597	0.0017347	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.69624	1	10066	10066		40.778	2.9666	1	39641000	+		35096	20303	23248	23257	40058	40058					0.09557314924882121
LTLLLEKVC	9	Unmodified	_LTLLLEKVC_					0	0	0			REV__ENSG00000152503|ENST00000513154|TRIM36	REV__ENSG00000152503|ENST00000513154|TRIM36	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3145141601562	2	516.312103	1030.60965	1.791	0.00092474	1.8914	0.00097654	3.6824	0.0019013	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.78983	1	12097	12097		27.882	3.3631	1	24820000	+		35097	20303	23248	23257	40059	40059					0.09557314924882121
LTLLLIQYSGT	11	Unmodified	_LTLLLIQYSGT_					0	0	0			REV__nc|ENSG00000143552|Q5VU65-2|NUP210L	REV__nc|ENSG00000143552|Q5VU65-2|NUP210L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3556518554688	2	611.358096	1220.70164	-0.40504	-0.00024762	-2.2662	-0.0013854	-2.6712	-0.0016331	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.72739	1	10053	10053		27.047	0	1	12417000	+		35098	19821	23249	23258	40060	40060					0.10011696542892423
LTLLLIQYSGT	11	Unmodified	_LTLLLIQYSGT_					0	0	0			REV__nc|ENSG00000143552|Q5VU65-2|NUP210L	REV__nc|ENSG00000143552|Q5VU65-2|NUP210L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3555908203125	2	611.358096	1220.70164	-1.2523	-0.00076562	-1.3545	-0.00082807	-2.6068	-0.0015937	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.70737	1	9812	9812		30.318	2.2362	1	16503000	+		35099	19821	23249	23258	40061	40061					0.10011696542892423
LTLLLSLLPL	10	Unmodified	_LTLLLSLLPL_					0	0	0		ENSG00000143669|ENST00000389793|LYST;nc|ENSG00000143669|Q99698-2|LYST;ENST00000489585.5_1_1:235926109-235996891:-|nuORF;nc|ENSG00000143669|Q99698-3|LYST;ENST00000465349.5_1_1:235954948-235996891:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3746337890625	2	548.373018	1094.73148	-1.4258	-0.00078185	3.8141	0.0020915	2.3883	0.0013097	548.3749403834641	37.356	2.5025	37.356	35.98	38.483	0					111	59	3	0	0	0	0.86589	1	2166	2166		29.15	0	1	203100			35100	4656	23250	23259	40062	40062					0.18790680278902983
LTLLNILDM	9	Unmodified	_LTLLNILDM_					0	0	0			REV__nc|ENSG00000152689|Q8IV61-2|RASGRP3	REV__nc|ENSG00000152689|Q8IV61-2|RASGRP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3041381835938	2	523.301736	1044.58892	1.1688	0.00061163	2.3066	0.0012071	3.4754	0.0018187	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.77244	1	9465	9465		32.812	2.3088	1	12580000	+		35101	20312	23251	23260	40063	40063					0.06840724545213561
LTLLPRLESSD	11	Unmodified	_LTLLPRLESSD_					0	0	0		chr10:73074915-73077721|44|23.75|0.95|4.65|-|0|TE_info:AluJo,AluJo_dup44225,Alu,SINE,donor,+,73077721,73078015|P4HA1,None|1	chr10:73074915-73077721|44|23.75|0.95|4.65|-|0|TE_info:AluJo,AluJo_dup44225,Alu,SINE,donor,+,73077721,73078015|P4HA1,None|1	chr10:73074915-73077721|44|23.75|0.95|4.65|-|0|TE_info:AluJo,AluJo_dup44225,Alu,SINE,donor,+,73077721,73078015|P4HA1,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	622.3482055664062	2	622.34826	1242.68197	1.3041	0.0008116	-2.7685	-0.001723	-1.4644	-0.00091136	622.3465977924652	95.841	2.6338	96.072	95.148	97.782	0.23103					155	62	3	0	0	0	0.72106	1	9878	9878		28.081	1.3886	1	379700			35102	83	23252	23261	40064	40064					0.07033320532127618
LTLLQRKLQP	10	Unmodified	_LTLLQRKLQP_					0	0	0		nc|ENSG00000168685|P16871-4|IL7R;nc|ENSG00000168685|P16871-3|IL7R;nc|ENSG00000168685|P16871-2|IL7R;ENSG00000168685|ENST00000303115|IL7R	nc|ENSG00000168685|P16871-4|IL7R	nc|ENSG00000168685|P16871-4|IL7R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.3890991210938	2	605.387522	1208.76049	-0.1695	-0.00010262	4.0427	0.0024474	3.8732	0.0023448	605.389885541641	45.128	1.0384	45.108	44.704	45.742	-0.01984					44	23	2	0	0	0	0.86549	1	3542	3542		31.53	15.888	1	150490			35103	6426	23253	23262	40065	40065					0.16446217627890292
LTLLRILRSN	10	Unmodified	_LTLLRILRSN_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2;ENST00000489018.1_1_1:109812400-109812848:+|nuORF	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2251892089844	3	400.25919	1197.75574	-1.7349	-0.00069442	4.0136	0.0016065	2.2786	0.00091204	400.2607766237734	41.111	0.63934	41.745	41.569	42.208	0.6339					21	17	2	0	0	0	0.37624	1	3557	3557		11.932	5.6115	1	883360			35104	4602	23254	23263	40066	40066					0.16477333485136114
LTLLRILRSN	10	Unmodified	_LTLLRILRSN_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2;ENST00000489018.1_1_1:109812400-109812848:+|nuORF	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	400.25919	1197.75574	-0.28523	-0.00011417	2.9175	0.0011677	2.6322	0.0010536	400.26039140535966	41.812	0.52615	41.767	41.434	41.96	-0.045471	0.011187	-0.00047488	NaN	11.932	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73699			35105	4602	23254	23263							0.16477333485136114
LTLLRKHRTS	10	Unmodified	_LTLLRKHRTS_					0	0	0		ENST00000589630.1_1_18:32821039-32822911:+|nuORF	ENST00000589630.1_1_18:32821039-32822911:+|nuORF	ENST00000589630.1_1_18:32821039-32822911:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.9222412109375	3	408.922689	1223.74624	-0.96203	-0.00039339	-0.092991	-3.8026E-05	-1.055	-0.00043142	408.92267652699474	104.87	3.639	104.87	103.29	106.93	0					182	86	5	0	0	0	0.86272	1	10823	10823		17.833	5.4003	1	1119800			35106	14242	23255	23264	40067	40067					0.14331565199586294
LTLLSVPLG	9	Unmodified	_LTLLSVPLG_					0	0	0			REV__ENSG00000139329|ENST00000266718|LUM	REV__ENSG00000139329|ENST00000266718|LUM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7932434082031	2	456.791861	911.569169	1.3225	0.00060413	1.789	0.00081719	3.1115	0.0014213	456.79255750887523	35.219	1.7546	35.6	35.098	36.853	0.3812					157	44	4	0	0	0	0.78058	2	2750	2750;2822		30.504	3.7075	1	7423700	+	+	35107	15993	23256	23265	40068;40069	40068					0.10984716596749422
LTLLTFLN	8	Unmodified	_LTLLTFLN_					0	0	0			REV__ENST00000249837.7_1_15:62243181-62244025:-|nuORF	REV__ENST00000249837.7_1_15:62243181-62244025:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.7826843261719	2	467.784036	933.553519	0.0034097	1.595E-06	-2.9001	-0.0013566	-2.8967	-0.001355	467.78253862288267	18.255	0.26925	18.176	18.048	18.317	-0.078941					17	11	2	0	0	0	0.89962	1	306	306		38.806	8.3025	1	70850	+		35108	24279	23257	23266	40070	40070					0.08408430079714435
LTLLTFLNGK	10	Unmodified	_LTLLTFLNGK_					0	0	0			REV__ENST00000249837.7_1_15:62243181-62244025:-|nuORF	REV__ENST00000249837.7_1_15:62243181-62244025:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3400268554688	2	560.342249	1118.66995	0.86184	0.00048292	-4.0684	-0.0022797	-3.2065	-0.0017968	560.3398879742181	105.87	1.7587	105.97	104.89	106.65	0.099007					143	43	5	0	0	0	0.82886	1	11354	11354		37.812	3.639	1	1773300	+		35109	24279	23258	23267	40071	40071					0.11535748579603933
LTLLTQDTGSW	11	Unmodified	_LTLLTQDTGSW_					0	0	0		nc|ENSG00000211660|P01705|IGLV2-23	nc|ENSG00000211660|P01705|IGLV2-23	nc|ENSG00000211660|P01705|IGLV2-23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	617.8206787109375	2	617.819335	1233.62412	0.4767	0.00029452	3.1702	0.0019586	3.6469	0.0022531	617.8208840144496	75.331	0.6804	75.896	75.584	76.264	0.56458					34	16	3	0	0	0	0.62614	1	8552	8552		41.427	7.505	1	367290			35110	15230	23259	23268	40072	40072					0.01665058606704406
LTLMAKVRCV	10	Unmodified	_LTLMAKVRCV_					0	0	0			REV__ENSG00000144554|ENST00000675286|FANCD2	REV__ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3301391601562	2	567.330304	1132.64606	-0.51077	-0.00028978	-0.29246	-0.00016592	-0.80324	-0.0004557	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.85934	1	9325	9325		35.618	6.4482	1	11042000	+		35111	19898	23260	23269	40073	40073					0.08503868549951221
LTLMAKVRCV	10	Unmodified	_LTLMAKVRCV_					0	0	0			REV__ENSG00000144554|ENST00000675286|FANCD2	REV__ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3299560546875	2	567.330304	1132.64606	0.79571	0.00045143	-1.8002	-0.0010213	-1.0045	-0.00056988	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.86718	1	9512	9512		27.882	2.3082	1	18145000	+		35112	19898	23260	23269	40074	40074					0.08503868549951221
LTLMAKVRCV	10	Unmodified	_LTLMAKVRCV_					0	0	0			REV__ENSG00000144554|ENST00000675286|FANCD2	REV__ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3299560546875	2	567.330304	1132.64606	0.27026	0.00015333	-0.82789	-0.00046969	-0.55764	-0.00031636	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.86218	1	11297	11297		32.812	2.4947	1	6007000	+		35113	19898	23260	23269	40075	40075					0.08503868549951221
LTLNHKSWLP	10	Unmodified	_LTLNHKSWLP_					0	0	0		ENST00000437916.2_1_2:45148822-45149500:-|nuORF	ENST00000437916.2_1_2:45148822-45149500:-|nuORF	ENST00000437916.2_1_2:45148822-45149500:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5749206542969	3	403.564391	1207.67134	-0.087117	-3.5157E-05	-1.7352	-0.00070024	-1.8223	-0.0007354	403.56368150750393	82.535	0.1265	83.009	82.919	83.045	0.47383					4	2	2	0	0	0	0.37624	1	9574	9574		18.531	9.7317	1	55331			35114	11745	23261	23270	40076	40076					0.07581382668354308
LTLNKNRIT	9	Unmodified	_LTLNKNRIT_					0	0	0		nc|ENSG00000148655|Q9H2I8|LRMDA;ENST00000593699.5_1_10:77643188-78317043:+|nuORF;ENSG00000148655|ENST00000611255|LRMDA	nc|ENSG00000148655|Q9H2I8|LRMDA	nc|ENSG00000148655|Q9H2I8|LRMDA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.3115844726562	2	536.827298	1071.64004	0.81635	0.00043824	-1.5196	-0.00081574	-0.70321	-0.0003775	536.8267180023249	98.181	1.1095	98.342	97.927	99.037	0.16074					52	24	3	0	0	0	0.20789	1	10186	10186		25.574	6.2141	1	128130			35115	4974	23262	23271	40077	40077					0.10708809634274985
LTLNQIEH	8	Unmodified	_LTLNQIEH_					0	0	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23614501953125	2	484.263999	966.513445	-0.8897	-0.00043085	-0.26076	-0.00012628	-1.1505	-0.00055713	484.2642858795304	86.221	0.4037	86.668	86.445	86.848	0.44736					14	9	2	0	0	0	0.4196	1	10126	10126		71.877	15.156	1	120070	+		35116	16148	23263	23272	40078	40078					0.02884883409149097
LTLNSFLKLLE	11	Unmodified	_LTLNSFLKLLE_					0	0	0		ENST00000540006.5_1_13:111293886-111296904:-|nuORF	ENST00000540006.5_1_13:111293886-111296904:-|nuORF	ENST00000540006.5_1_13:111293886-111296904:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.8841552734375	2	645.887021	1289.75949	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.55	1	105.62	105.12	106.12	0.073112								0	0	0	0.56276	1	11190	11190		28.081	3.5623	1				35117	13489	23264	23273	40079	40079					0.12619958468303594
LTLPGIRWA	9	Unmodified	_LTLPGIRWA_					0	0	0		ENST00000553888.5_1_14:77923528-77923726:-|nuORF	ENST00000553888.5_1_14:77923528-77923726:-|nuORF	ENST00000553888.5_1_14:77923528-77923726:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.3102416992188	2	513.808377	1025.6022	-0.052006	-2.6721E-05	-0.13091	-6.7263E-05	-0.18292	-9.3984E-05	513.80813181887	66.806	0.42136	66.822	66.616	67.037	0.016197					32	19	2	0	0	0	0.76764	1	6269	6269		34.173	2.2177	1	91203			35118	13710	23265	23274	40080	40080					0.09042343439477918
LTLPLKLPI	9	Unmodified	_LTLPLKLPI_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34539794921875	2	504.346803	1006.67905	0.11336	5.7171E-05	-3.112	-0.0015695	-2.9987	-0.0015124	504.3451867946114	55.153	1.8423	55.554	54.023	55.866	0.40101					89	43	3	0	0	0	0.7932	1	5656	5656		18.324	0	1	1856800	+		35119	29597	23266	23275	40081	40081					0.17598141935934564
LTLPLKLPI	9	Unmodified	_LTLPLKLPI_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34527587890625	2	504.346803	1006.67905	-0.55637	-0.0002806	-2.161	-0.0010899	-2.7173	-0.0013705	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.7932	1	5696	5696		23.042	0	1	1905800	+		35120	29597	23266	23275	40082	40082					0.17598141935934564
LTLPLKLPI	9	Unmodified	_LTLPLKLPI_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3453063964844	2	504.346803	1006.67905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.843	1	53.266	52.766	53.766	0.42348								0	0	0	0.30778	1	5311	5311		27.882	0	1		+		35121	29597	23266	23275	40083	40083					0.17598141935934564
LTLPLKLPI	9	Unmodified	_LTLPLKLPI_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.34588623046875	2	504.346803	1006.67905	0.93532	0.00047173	-3.4819	-0.0017561	-2.5465	-0.0012843	504.3449357960576	55.64	0.72586	56.209	55.824	56.55	0.56836					45	18	3	0	0	0	0.74721	1	5769	5769		37.159	0	1	1733500	+		35122	29597	23266	23275	40084	40084					0.17598141935934564
LTLPLKLPI	9	Unmodified	_LTLPLKLPI_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	504.346803	1006.67905	-1.3838	-0.00069792	-1.5681	-0.00079086	-2.9519	-0.0014888	504.34588376204005	56.017	1.145	56.017	55.11	56.255	0	-0.091079	0.00089244	NaN	37.159	41	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58278	+		35123	29597	23266	23275							0.17598141935934564
LTLPLKLPI	9	Unmodified	_LTLPLKLPI_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	504.346803	1006.67905	-1.2345	-0.0006226	-1.9785	-0.00099787	-3.213	-0.0016205	504.34560807126263	55.842	1.0386	55.873	55.076	56.114	0.030838	-0.23505	0.00047842	NaN	37.159	35	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53870	+		35124	29597	23266	23275							0.17598141935934564
LTLPLKLPI	9	Unmodified	_LTLPLKLPI_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	504.346803	1006.67905	0.40092	0.0002022	-3.1939	-0.0016108	-2.7929	-0.0014086	504.34503342690084	56.089	1.1875	56.188	55.08	56.268	0.099186	0.080071	-0.00074747	NaN	37.159	54	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108870	+		35125	29597	23266	23275							0.17598141935934564
LTLPLKLPI	9	Unmodified	_LTLPLKLPI_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|181|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	504.346803	1006.67905	-0.4523	-0.00022812	-2.9241	-0.0014748	-3.3764	-0.0017029	504.345236724226	56.044	1.1367	56.007	54.998	56.135	-0.036827	-0.10056	-0.00047536	NaN	37.159	61	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140920	+		35126	29597	23266	23275							0.17598141935934564
LTLPPCLTG	9	Carbamidomethyl (C)	_LTLPPC(Carbamidomethyl (C))LTG_	LTLPPC(1)LTG		LTLPPC(44)LTG		0	1	0			REV__ENSG00000105429|ENST00000251268|MEGF8	REV__ENSG00000105429|ENST00000251268|MEGF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.26690673828125	2	486.265153	970.515753	0.08019	3.8993E-05	3.8106	0.0018529	3.8908	0.0018919	486.2668793256364	86.146	4.4086	86.59	84.867	89.275	0.44331					281	107	4	0	0	0	0.64922	1	10251	10251		44.117	8.4985	1	1279400	+		35127	17539	23267	23276	40085	40085	227				0.0293159582259932
LTLPSASY	8	Unmodified	_LTLPSASY_					0	0	0			REV__ENSG00000272031|ENST00000606888|ANKRD34A	REV__ENSG00000272031|ENST00000606888|ANKRD34A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2950744628906	2	426.229094	850.443634	0.098998	4.2196E-05	0.98806	0.00042114	1.0871	0.00046334	426.2295106662163	71.447	0.66061	71.994	71.615	72.276	0.54756					22	15	2	0	0	0	0.4196	1	8006	8006		55.504	14.932	1	92219	+		35128	23984	23268	23277	40086	40086					0.012430047405246114
LTLPSLRLY	9	Unmodified	_LTLPSLRLY_					0	0	0		ENST00000477081.1_1_17:59477759-59482423:+|nuORF;ENSG00000121068|ENST00000240328|TBX2	ENST00000477081.1_1_17:59477759-59482423:+|nuORF	ENST00000477081.1_1_17:59477759-59482423:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3282470703125	2	538.329142	1074.64373	-0.48349	-0.00026028	0.54623	0.00029405	0.062732	3.3771E-05	538.3292398491958	80.11	1.3312	80.637	80.275	81.607	0.52676					72	31	4	0	0	0	0.19818	1	9271	9271		74.255	15.473	1	1852700			35129	12351	23269	23278	40087	40087					0.10939479408125408
LTLPWRLAPP	10	Unmodified	_LTLPWRLAPP_					0	0	0		ENST00000358752.3_1_11:94277417-94277780:+|nuORF	ENST00000358752.3_1_11:94277417-94277780:+|nuORF	ENST00000358752.3_1_11:94277417-94277780:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3532104492188	2	582.350409	1162.68626	3.1755	0.0018492	2.3296	0.0013566	5.5051	0.0032059	582.3516873640681	107.33	0.84415	107.3	106.75	107.59	-0.034134					36	19	2	0	0	0	0.86763	1	11838	11838		26.693	0	1	898660			35130	10417	23270	23279	40088	40088					0.11142874536380987
LTLQIFLRIL	10	Unmodified	_LTLQIFLRIL_					0	0	0			REV__ENSG00000065325|ENST00000262441|GLP2R	REV__ENSG00000065325|ENST00000262441|GLP2R	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.4013671875	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.936	1	17.013	16.513	17.513	0.07715								0	0	0	0.45132	1	152	152		9.7057	0	1		+		35131	16496	23271	23280	40089	40089					0.18548576293073893
LTLQPLEAH	9	Unmodified	_LTLQPLEAH_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.28643798828125	2	511.287474	1020.5604	-1.5518	-0.0007934	0.65042	0.00033255	-0.90135	-0.00046085	511.28763661664226	41.815	1.2851	41.815	41.359	42.644	0					75	31	4	0	0	0	0.084975	1	2845	2845		96.19	5.8206	1	1825200	+		35132	21204	23272	23281	40090	40090					0.05093742960275449
LTLQPLEAH	9	Unmodified	_LTLQPLEAH_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.2861022949219	2	511.287474	1020.5604	-1.2853	-0.00065715	-0.086664	-4.431E-05	-1.3719	-0.00070146	511.2874104215347	41.926	2.0437	41.929	41.503	43.546	0.0034142					109	48	4	0	0	0	0.14386	1	3098	3098		84.916	0	1	7262400	+		35133	21204	23272	23281	40091	40091					0.05093742960275449
LTLQQRVTLH	10	Unmodified	_LTLQQRVTLH_					0	0	0			REV__nc|ENSG00000174576|Q8IUM7-3|NPAS4	REV__nc|ENSG00000174576|Q8IUM7-3|NPAS4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5757141113281	3	403.575178	1207.70371	0.5494	0.00022172	-1.2677	-0.0005116	-0.71827	-0.00028987	403.5745990745283	80.411	1.2826	80.552	79.622	80.904	0.14118					87	49	3	0	0	0	0.85981	1	7650	7650		35.152	4.8343	1	245600	+		35134	22004	23273	23282	40092	40092					0.10816170071393572
LTLQSNENN	9	Unmodified	_LTLQSNENN_					0	0	0		ENST00000590722.2_1_18:48573416-48579019:+|nuORF	ENST00000590722.2_1_18:48573416-48579019:+|nuORF	ENST00000590722.2_1_18:48573416-48579019:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2877807617188	2	516.751453	1031.48835	-0.39148	-0.0002023	0.27952	0.00014444	-0.11196	-5.7855E-05	516.7512381564939	28.723	0.51648	28.694	28.481	28.997	-0.029207					22	11	3	0	0	0	0.20789	1	1793	1793		15.642	0.97771	1	102300			35135	14262	23274	23283	40093	40093					-0.026132161840678236
LTLQVYRE	8	Unmodified	_LTLQVYRE_					0	0	0		nc|ENSG00000106785|Q14142-2|TRIM14;nc|ENSG00000106785|Q14142-3|TRIM14;ENSG00000106785|ENST00000341469|TRIM14	nc|ENSG00000106785|Q14142-2|TRIM14	nc|ENSG00000106785|Q14142-2|TRIM14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2841491699219	2	511.287474	1020.5604	-0.92708	-0.000474	-0.33784	-0.00017274	-1.2649	-0.00064674	511.2872429876972	41.91	2.375	41.872	41.45	43.825	-0.038223					133	56	5	0	0	0	0.9283	1	3263	3263		49.442	6.5773	1	7049200			35136	2318	23275	23284	40094	40094					0.05093742960286818
LTLRLQDY	8	Unmodified	_LTLRLQDY_					0	0	0		nc|ENSG00000197121|Q75T13-2|PGAP1;ENSG00000197121|ENST00000354764|PGAP1;ENST00000482051.5_1_2:197742354-197755557:-|nuORF;nc|ENSG00000197121|Q75T13-4|PGAP1;ENST00000470179.5_1_2:197712669-197791463:-|nuORF;nc|ENSG00000197121|Q75T13-3|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2858581542969	2	511.287474	1020.5604	-0.92708	-0.000474	-0.33784	-0.00017274	-1.2649	-0.00064674	511.2872429876972	41.91	2.375	41.872	41.45	43.825	-0.038223					133	56	5	0	0	0	0.72312	1	3237	3237		66.429	0	1	7049200			35137	8136	23276	23285	40095	40095					0.05093742960286818
LTLRNPRG	8	Unmodified	_LTLRNPRG_					0	0	0		ENST00000596217.1_2_19:50431895-50432066:-|nuORF	ENST00000596217.1_2_19:50431895-50432066:-|nuORF	ENST00000596217.1_2_19:50431895-50432066:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7785339355469	2	463.780151	925.545748	-1.5619	-0.00072439	-2.2102	-0.001025	-3.7721	-0.0017494	463.7789917990883	40.071	0.93996	40.66	39.781	40.721	0.58915					32	21	2	0	0	0	0.92973	1	3377	3377		50.025	2.1089	1	1224900			35138	14332	23277	23286	40096	40096					0.079997156028071
LTLRTVQVNPL	11	Unmodified	_LTLRTVQVNPL_					0	0	0			REV__ENSG00000242173|ENST00000219409|ARHGDIG	REV__ENSG00000242173|ENST00000219409|ARHGDIG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.8832397460938	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.7144	1	12950	12950		29.17	1.2878	1	19815000	+		35139	23830	23278	23287	40097	40097					0.13405609902679316
LTLSELDDIIK	11	Unmodified	_LTLSELDDIIK_					0	0	0		nc|ENSG00000112769|Q16363-2|LAMA4;nc|ENSG00000112769|Q16363|LAMA4;ENSG00000112769|ENST00000230538|LAMA4	nc|ENSG00000112769|Q16363-2|LAMA4	nc|ENSG00000112769|Q16363-2|LAMA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	630.3565673828125	2	630.358293	1258.70203	0.2707	0.00017064	0.89341	0.00056317	1.1641	0.00073381	630.3587234494281	46.939	0.62566	46.851	46.509	47.135	-0.087646					47	17	4	0	0	0	0.68431	1	3460	3460		24.519	0	1	514510			35140	2679	23279	23288	40098	40098					0.08303071472096235
LTLSILSIMA	10	Unmodified	_LTLSILSIMA_					0	0	0		ENSG00000198763|ENST00000361453|MT-ND2	ENSG00000198763|ENST00000361453|MT-ND2	ENSG00000198763|ENST00000361453|MT-ND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3189697265625	2	531.317386	1060.62022	2.5638	0.0013622	1.1045	0.00058685	3.6683	0.001949	531.3177191515188	95.1	2.5434	95.042	94.557	97.1	-0.057526					188	59	5	0	0	0	0.86718	1	10182	10182		27.882	4.8398	1	4072600			35141	8325	23280	23289	40099	40099					0.09233297579316968
LTLSILSIMA	10	Unmodified	_LTLSILSIMA_					0	0	0		ENSG00000198763|ENST00000361453|MT-ND2	ENSG00000198763|ENST00000361453|MT-ND2	ENSG00000198763|ENST00000361453|MT-ND2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.3187255859375	2	531.317386	1060.62022	-0.04293	-2.281E-05	3.7647	0.0020003	3.7218	0.0019775	531.3190516758626	94.867	1.8687	95.098	94.611	96.479	0.23103					163	44	5	0	0	0	0.86218	1	9713	9713		32.812	2.4947	1	2940800			35142	8325	23280	23289	40100	40100					0.09233297579316968
LTLSLIEIDM	10	Unmodified	_LTLSLIEIDM_					0	0	0			REV__ENST00000295522.3_1_3:190025984-190026023:-|nuORF	REV__ENST00000295522.3_1_3:190025984-190026023:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3192138671875	2	574.317583	1146.62061	1.0954	0.0006291	2.2335	0.0012827	3.3289	0.0019118	574.3187099892803	94.307	4.5457	94.353	93.159	97.704	0.046173					261	107	4	0	0	0	0.8608	1	9861	9861		34.173	0.25091	1	1593500	+		35143	24700	23281	23290	40101	40101					0.05316672508479314
LTLTHLPGPK	10	Unmodified	_LTLTHLPGPK_					0	0	0		ENSG00000178084|ENST00000318351|HTR3C	ENSG00000178084|ENST00000318351|HTR3C	ENSG00000178084|ENST00000318351|HTR3C	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8263549804688	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.8	1	113.82	113.32	114.32	0.020027								0	0	0	0.45132	1	13740	13740		42.396	4.5846	1				35144	7182	23282	23291	40102	40102					0.10418595265377917
LTLTLLRGAQE	11	Unmodified	_LTLTLLRGAQE_					0	0	0		ENSG00000105376|ENST00000221980|ICAM5	ENSG00000105376|ENST00000221980|ICAM5	ENSG00000105376|ENST00000221980|ICAM5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.5772399902344	3	405.574955	1213.70304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.04	1	103.34	102.84	103.84	0.29865								0	0	0	0.56276	1	12567	12567		21.032	1.7696	1				35145	2211	23283	23292	40103	40103					0.10473330631634781
LTLTPLVGL	9	Unmodified	_LTLTPLVGL_					0	0	0			REV__nc|ENSG00000138623|O75326-2|SEMA7A	REV__nc|ENSG00000138623|O75326-2|SEMA7A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.79998779296875	2	463.799686	925.584819	-0.24475	-0.00011352	3.0643	0.0014212	2.8195	0.0013077	463.8008545525102	46.185	0.71794	46.106	45.759	46.477	-0.079006					36	20	2	0	0	0	0.7932	1	3340	3340		17.365	0	1	192340	+		35146	19483	23284	23293	40104	40104					0.11905003113827206
LTLTVLPLG	9	Unmodified	_LTLTVLPLG_					0	0	0			REV__ENST00000472310.5_1_4:110481463-110603916:+|nuORF	REV__ENST00000472310.5_1_4:110481463-110603916:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.7989807128906	2	463.799686	925.584819	-1.1872	-0.0005506	2.6442	0.0012264	1.4571	0.00067579	463.80074391702703	41.648	1.5471	41.608	41.079	42.626	-0.039845					90	38	3	0	0	0	0.76255	1	3100	3100		35.618	6.4687	1	510860	+		35147	27257	23285	23294	40105	40105					0.11905003113815837
LTLTVLPLG	9	Unmodified	_LTLTVLPLG_					0	0	0			REV__ENST00000472310.5_1_4:110481463-110603916:+|nuORF	REV__ENST00000472310.5_1_4:110481463-110603916:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7992248535156	2	463.799686	925.584819	-2.5644	-0.0011894	3.5074	0.0016267	0.94293	0.00043733	463.80118382898894	40.741	0.9326	41.133	40.832	41.765	0.39209					70	26	3	0	0	0	0.7932	1	3538	3538		15.642	1.8665	1	5806600	+		35148	27257	23285	23294	40106	40106					0.11905003113815837
LTLTVLPLG	9	Unmodified	_LTLTVLPLG_					0	0	0			REV__ENST00000472310.5_1_4:110481463-110603916:+|nuORF	REV__ENST00000472310.5_1_4:110481463-110603916:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.79681396484375	2	463.799686	925.584819	-1.7032	-0.00078997	2.9558	0.0013709	1.2525	0.00058091	463.8008996094523	40.729	0.89679	41.318	40.908	41.805	0.58916					67	25	3	0	0	0	0.76255	1	3569	3569		35.618	3.6634	1	5530000	+		35149	27257	23285	23294	40107	40107					0.11905003113815837
LTLTVLPLS	9	Unmodified	_LTLTVLPLS_					0	0	0		ENST00000535614.5_1_12:122237433-122239328:-|nuORF	ENST00000535614.5_1_12:122237433-122239328:-|nuORF	ENST00000535614.5_1_12:122237433-122239328:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8072814941406	2	478.804968	955.595384	-0.91897	-0.00044001	3.0146	0.0014434	2.0957	0.0010034	478.8062344602325	41.651	1.2493	41.655	41.077	42.326	0.0044022					74	33	3	0	0	0	0.7932	1	2703	2703		21.96	4.5949	1	258200			35150	13427	23286	23295	40108	40108					0.11580985768239316
LTLTVTQH	8	Unmodified	_LTLTVTQH_					0	0	0			REV__ENST00000261226.8_1_12:94964130-94964496:-|nuORF	REV__ENST00000261226.8_1_12:94964130-94964496:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30108642578125	2	456.761092	911.507631	1.0534	0.00048115	-1.5491	-0.00070757	-0.49572	-0.00022643	456.76055511352075	34.039	0.41247	34.344	34.117	34.53	0.30494					13	9	2	0	0	0	0.4196	1	2534	2534		38.806	0	1	150290	+		35151	24380	23287	23296	40109	40109					0.04833784897471105
LTLVLIDEP	9	Unmodified	_LTLVLIDEP_					0	0	0		ENST00000527285.1_1_11:18728401-18728901:+|nuORF	ENST00000527285.1_1_11:18728401-18728901:+|nuORF	ENST00000527285.1_1_11:18728401-18728901:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.80078125	2	506.799883	1011.58521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.742	1	50.742	50.242	51.242	0								0	0	0	0.30416	1	4071	4071		29.15	4.9468	1				35152	13283	23288	23297	40110	40110					0.0798837804301229
LTLVLSLTP	9	Unmodified	_LTLVLSLTP_					0	0	0			REV__ENSG00000008869|ENST00000233099|HEATR5B	REV__ENSG00000008869|ENST00000233099|HEATR5B	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.8044738769531	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.507	1	42.572	42.072	43.072	0.065037								0	0	0	0.28386	1	2864	2864		37.159	5.2042	1		+		35153	16144	23289	23298	40111	40111					0.11580985768239316
LTLVVVEDD	9	Unmodified	_LTLVVVEDD_					0	0	0		nc|ENSG00000115109|Q9HCM4-2|EPB41L5;nc|ENSG00000115109|Q9HCM4-4|EPB41L5;nc|ENSG00000115109|Q9HCM4-3|EPB41L5;ENSG00000115109|ENST00000263713|EPB41L5;nc|ENSG00000095203|Q9H329-2|EPB41L4B;ENSG00000095203|ENST00000374566|EPB41L4B	nc|ENSG00000115109|Q9HCM4-2|EPB41L5	nc|ENSG00000115109|Q9HCM4-2|EPB41L5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2904357910156	2	501.771322	1001.52809	-1.6019	-0.00080378	-0.85772	-0.00043038	-2.4596	-0.0012342	501.7709588535126	88.108	3.1207	88.277	86.829	89.949	0.16922					117	72	2	0	0	0	0.20789	1	8814	8814		42.396	18.193	1	130540			35154	2813	23290	23299	40112	40112					0.027389107666294876
LTLWLFSNN	9	Unmodified	_LTLWLFSNN_					0	0	0		nc|ENSG00000186907|Q86UN3-2|RTN4RL2;ENSG00000186907|ENST00000335099|RTN4RL2	nc|ENSG00000186907|Q86UN3-2|RTN4RL2	nc|ENSG00000186907|Q86UN3-2|RTN4RL2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.7434692382812	2	554.295299	1106.57605	-0.88468	-0.00049037	4.3567	0.0024149	3.472	0.0019245	554.2975585333593	72.033	0.81622	72.033	71.634	72.45	0					43	33	2	0	0	0	0.20789	1	6455	6455		6.3127	0	1	57421			35155	7826	23291	23300	40113	40113					0.027020294773365094
LTLYNLGI	8	Unmodified	_LTLYNLGI_					0	0	0		ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.7661437988281	2	453.768386	905.522219	-1.2895	-0.00058512	-3.8536	-0.0017487	-5.1431	-0.0023338	453.7664319671317	42.031	1.3122	42.035	41.619	42.931	0.0043983					83	36	3	0	0	0	0.90465	1	2821	2821		40.573	0	1	708440			35156	8220	23292	23301	40114	40114					0.06567857045604342
LTLYTKKQF	9	Unmodified	_LTLYTKKQF_					0	0	0		nc|ENSG00000214367|Q68CZ6-2|HAUS3;ENSG00000214367|ENST00000443786|HAUS3	nc|ENSG00000214367|Q68CZ6-2|HAUS3	nc|ENSG00000214367|Q68CZ6-2|HAUS3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.2882690429688	2	571.334424	1140.6543	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.53	1	66.083	65.583	66.583	0.5526								0	0	0	0.29134	1	7140	7140		34.173	0.65696	1				35157	8625	23293	23302	40115	40115					0.08959462062557577
LTMKSVLLN	9	Unmodified	_LTMKSVLLN_					0	0	0			REV__ENST00000327300.11_1_1:32508467-32508587:+|nuORF	REV__ENST00000327300.11_1_1:32508467-32508587:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80413818359375	2	509.801903	1017.58925	-0.054339	-2.7702E-05	3.6212	0.0018461	3.5668	0.0018184	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.7932	1	8596	8596		26.693	1.2427	1	2906900	+		35158	25088	23294	23303	40116	40116					0.08116144265079583
LTMKTGLL	8	Unmodified	_LTMKTGLL_					0	0	0		ENST00000339094.5_1_15:85081807-85112930:-|nuORF	ENST00000339094.5_1_15:85081807-85112930:-|nuORF	ENST00000339094.5_1_15:85081807-85112930:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.7655944824219	2	438.764789	875.515025	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.08	1	41.086	40.586	41.586	0.0065727								0	0	0	0.29755	1	3001	3001		24.203	9.5387	1				35159	10213	23295	23304	40117	40117					0.07228801173550892
LTMLASILLW	10	Unmodified	_LTMLASILLW_					0	0	0			REV__ENST00000549185.5_3_14:31803609-31872202:-|nuORF	REV__ENST00000549185.5_3_14:31803609-31872202:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.8404541015625	2	580.841028	1159.6675	0.60129	0.00034925	-1.4989	-0.00087062	-0.89762	-0.00052137	580.839949137506	69.631	0.83281	69.76	69.457	70.29	0.1291					104	40	3	0	0	0	0.86763	1	6303	6303		26.693	2.4902	1	14222000	+		35160	18823	23296	23305	40118	40118					0.09405576850303987
LTMLPRLVS	9	Unmodified	_LTMLPRLVS_					0	0	0		nc|ENSG00000006555|Q5TAA0-2|TTC22;chr3:17508605-17543373|25|10.48|0.49|4.42|-|0|TE_info:AluJr,AluJr_dup13438,Alu,SINE,donor,+,17543373,17543665|TBC1D5,None|2;ENST00000494373.1_1_2:54014347-54015815:+|nuORF;ENST00000506795.1_1_4:109461916-109478168:-|nuORF;ENST00000489476.5_1_2:73956300-73964431:-|nuORF;ENST00000463231.5_1_2:73956300-73964442:-|nuORF;ENSG00000179240|ENST00000529331|GVQW3	nc|ENSG00000006555|Q5TAA0-2|TTC22	nc|ENSG00000006555|Q5TAA0-2|TTC22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.310791015625	2	515.309895	1028.60524	-0.55946	-0.0002883	0.60137	0.00030989	0.041903	2.1593E-05	515.3100019000319	59.336	1.1389	59.727	59.399	60.538	0.39077					69	28	3	0	0	0	0.36616	1	6289	6289		60.118	0	1	1213100			35161	14733	23297	23306	40119	40119					0.09207850501957182
LTMLPRLVS	9	Unmodified	_LTMLPRLVS_					0	0	0		nc|ENSG00000006555|Q5TAA0-2|TTC22;chr3:17508605-17543373|25|10.48|0.49|4.42|-|0|TE_info:AluJr,AluJr_dup13438,Alu,SINE,donor,+,17543373,17543665|TBC1D5,None|2;ENST00000494373.1_1_2:54014347-54015815:+|nuORF;ENST00000506795.1_1_4:109461916-109478168:-|nuORF;ENST00000489476.5_1_2:73956300-73964431:-|nuORF;ENST00000463231.5_1_2:73956300-73964442:-|nuORF;ENSG00000179240|ENST00000529331|GVQW3	nc|ENSG00000006555|Q5TAA0-2|TTC22	nc|ENSG00000006555|Q5TAA0-2|TTC22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3097534179688	2	515.309895	1028.60524	0.70917	0.00036544	-0.64391	-0.00033181	0.065261	3.363E-05	515.3093455748867	57.303	1.0752	57.858	57.355	58.43	0.55513					83	26	4	0	0	0	0.24527	1	5978	5978		69.628	2.134	1	3327500			35162	14733	23297	23306	40120	40120					0.09207850501957182
LTMSAVVK	8	Unmodified	_LTMSAVVK_					0	0	0		ENSG00000186141|ENST00000334163|POLR3C	ENSG00000186141|ENST00000334163|POLR3C	ENSG00000186141|ENST00000334163|POLR3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.7501525878906	2	424.749139	847.483725	-1.1077	-0.0004705	4.0857	0.0017354	2.978	0.0012649	424.75077823094307	39.551	1.4058	40.106	39.319	40.724	0.55449					65	32	3	0	0	0	0.91977	1	3351	3351		45.952	0	1	334040			35163	7777	23298	23307	40121	40121					0.05388228139452167
LTNLNPGTTY	10	Unmodified	_LTNLNPGTTY_					0	0	0		ENSG00000139304|ENST00000644991|PTPRQ;nc|ENSG00000139304|Q9UMZ3|PTPRQ	ENSG00000139304|ENST00000644991|PTPRQ	ENSG00000139304|ENST00000644991|PTPRQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.279541015625	2	547.279846	1092.54514	0.42612	0.0002332	-0.67232	-0.00036795	-0.2462	-0.00013474	547.2793249693905	26.828	0.98989	26.79	26.483	27.473	-0.038525					50	23	3	0	0	0	0.82886	1	1264	1264		37.812	2.1932	1	181010			35164	4360	23299	23308	40122	40122					0.002568313724395921
LTNNVRQL	8	Unmodified	_LTNNVRQL_					0	0	0			REV__ENSG00000135862|ENST00000258341|LAMC1	REV__ENSG00000135862|ENST00000258341|LAMC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2774963378906	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.91977	1	9680	9680		45.952	0	1	5642300	+		35165	19260	23300	23309	40123	40123					0.06031992020314192
LTNTNLKIPQ	10	Unmodified	_LTNTNLKIPQ_					0	0	0			REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.3308715820312	2	571.332413	1140.65027	0.87236	0.00049841	-3.3864	-0.0019347	-2.514	-0.0014363	571.3304741505596	102.17	3.4204	102.3	101.59	105.01	0.13523					157	84	4	0	0	0	0.86587	1	10729	10729		29.17	3.1067	1	3995900	+		35166	19793	23301	23310	40124	40124					0.08557372568861865
LTPAAVKMQTR	11	Unmodified	_LTPAAVKMQTR_					0	0	0		ENST00000606367.1_1_6:31165433-31165721:-|nuORF	ENST00000606367.1_1_6:31165433-31165721:-|nuORF	ENST00000606367.1_1_6:31165433-31165721:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.90179443359375	3	405.900786	1214.68053	1.5312	0.00062153	3.7986	0.0015419	5.3299	0.0021634	405.90213602011227	15.76	0.22998	15.271	15.204	15.434	-0.48917					8	5	2	0	0	0	0.71207	1	48	48		29.551	0	1	67897			35167	14448	23302	23311	40125	40125					0.08177407962375582
LTPEPTLVI	9	Unmodified	_LTPEPTLVI_					0	0	0			REV__nc|ENSG00000183597|Q6ICL3-6|TANGO2	REV__nc|ENSG00000183597|Q6ICL3-6|TANGO2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7965393066406	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.165	1	78.259	77.759	78.759	0.0942								0	0	0	0.2969	1	7326	7326		31.955	7.7521	1		+		35168	30086	23303	23312	40126	40126					0.08312395388554705
LTPEQVRT	8	Unmodified	_LTPEQVRT_					0	0	0		ENST00000489643.6_1_9:34649384-34650059:+|nuORF	ENST00000489643.6_1_9:34649384-34650059:+|nuORF	ENST00000489643.6_1_9:34649384-34650059:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2718811035156	2	472.263999	942.513445	0.76763	0.00036253	-0.40865	-0.00019299	0.35898	0.00016953	472.2636171025307	20.516	0.59324	20.057	19.687	20.28	-0.4591					16	12	2	0	0	0	0.4196	1	615	615		19.36	0	1	79193			35169	12656	23304	23313	40127	40127					0.03988883409135724
LTPFPPLFG	9	Unmodified	_LTPFPPLFG_					0	0	0			REV__ENSG00000079557|ENST00000226355|AFM	REV__ENSG00000079557|ENST00000226355|AFM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7798767089844	2	494.778754	987.542954	0.77019	0.00038107	2.0716	0.001025	2.8418	0.0014061	494.77966004867045	84.042	2.7013	83.973	82.365	85.067	-0.069313					89	62	2	0	0	0	0.77546	1	8635	8635		31.955	7.7521	1	283830	+		35170	16788	23305	23314	40128	40128					0.04868447425292288
LTPGADPE	8	Unmodified	_LTPGADPE_					0	0	0			REV__ENST00000528819.1_1_11:74570221-74618263:-|nuORF	REV__ENST00000528819.1_1_11:74570221-74618263:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.1968688964844	2	400.195251	798.375948	-1.8641	-0.00074599	2.303	0.00092164	0.43892	0.00017565	400.1964135469885	86.084	1.1453	86.243	85.89	87.035	0.15851					68	26	3	0	0	0	0.4196	1	8371	8371		23.042	10.836	1	5235800	+		35171	28258	23306	23315	40129	40129					-0.03130445190288356
LTPKGPIR	8	Unmodified	_LTPKGPIR_					0	0	0		ENST00000423759.5_1_X:70607231-70608150:+|nuORF	ENST00000423759.5_1_X:70607231-70608150:+|nuORF	ENST00000423759.5_1_X:70607231-70608150:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.2865295410156	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.576	1	40.657	40.157	41.157	0.081345								0	0	0	0.30004	1	2588	2588		21.702	6.0661	1				35172	11503	23307	23316	40130	40130					0.10438385376653514
LTPKYFKQIK	10	Unmodified	_LTPKYFKQIK_					0	0	0		ENST00000264954.4_1_4:7062196-7062313:-|nuORF	ENST00000264954.4_1_4:7062196-7062313:-|nuORF	ENST00000264954.4_1_4:7062196-7062313:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5919494628906	3	422.592058	1264.75434	-1.8082	-0.00076411	2.8308	0.0011963	1.0226	0.00043216	422.5931690145651	56.763	1.1935	56.835	56.503	57.696	0.071835					118	57	3	0	0	0	0.85259	1	4770	4770		20.03	2.1973	1	582700			35173	9490	23308	23317	40131	40131					0.13255699396358978
LTPKYFKQIK	10	Unmodified	_LTPKYFKQIK_					0	0	0		ENST00000264954.4_1_4:7062196-7062313:-|nuORF	ENST00000264954.4_1_4:7062196-7062313:-|nuORF	ENST00000264954.4_1_4:7062196-7062313:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.3833618164062	2	633.384448	1264.75434	0.12605	7.984E-05	1.4207	0.00089988	1.5468	0.00097972	633.3850253113031	51.101	1.496	51.017	50.491	51.987	-0.084538					79	43	3	0	0	0	0.85979	1	4162	4162		30.318	13.6	1	224090			35174	9490	23308	23317	40132	40132					0.13255699396358978
LTPLKDTERFG	11	Unmodified	_LTPLKDTERFG_					0	0	0		nc|ENSG00000105928|O60443-3|GSDME;ENSG00000105928|ENST00000645220|GSDME;nc|ENSG00000105928|O60443-2|GSDME	nc|ENSG00000105928|O60443-3|GSDME	nc|ENSG00000105928|O60443-3|GSDME	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	638.8463134765625	2	638.848427	1275.6823	0.50905	0.00032521	-3.0307	-0.0019361	-2.5216	-0.0016109	638.846454423303	15.763	0.13638	15.274	15.204	15.34	-0.48917					8	3	3	0	0	0	0.69248	1	46	46		32.751	7.1765	1	100860			35175	2264	23309	23318	40133	40133					0.0554874025197023
LTPLKDTERFG	11	Unmodified	_LTPLKDTERFG_					0	0	0		nc|ENSG00000105928|O60443-3|GSDME;ENSG00000105928|ENST00000645220|GSDME;nc|ENSG00000105928|O60443-2|GSDME	nc|ENSG00000105928|O60443-3|GSDME	nc|ENSG00000105928|O60443-3|GSDME	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	638.848427	1275.6823	1.6874	0.001078	-5.0235	-0.0032093	-3.3361	-0.0021313	638.845191579484	15.813	0.20017	15.214	15.091	15.291	-0.59873	-0.029999	-0.0018115	NaN	32.751	9	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70004			35176	2264	23309	23318							0.0554874025197023
LTPLKPLLL	9	Unmodified	_LTPLKPLLL_					0	0	0			REV__ENSG00000053900|ENST00000315368|ANAPC4	REV__ENSG00000053900|ENST00000315368|ANAPC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3456115722656	2	504.346803	1006.67905	0.11336	5.7171E-05	-3.112	-0.0015695	-2.9987	-0.0015124	504.3451867946114	55.153	1.8423	55.554	54.023	55.866	0.40101					89	43	3	0	0	0	0.7932	1	5492	5492		21.96	0	1	1856800	+		35177	16393	23310	23319	40134	40134					0.17598141935934564
LTPLKPLLL	9	Unmodified	_LTPLKPLLL_					0	0	0			REV__ENSG00000053900|ENST00000315368|ANAPC4	REV__ENSG00000053900|ENST00000315368|ANAPC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34521484375	2	504.346803	1006.67905	-0.55637	-0.0002806	-2.161	-0.0010899	-2.7173	-0.0013705	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.76255	2	5852	5852;5864		35.618	7.4004	1	1905800	+		35178	16393	23310	23319	40135;40136	40135					0.17598141935934564
LTPLKPLLL	9	Unmodified	_LTPLKPLLL_					0	0	0			REV__ENSG00000053900|ENST00000315368|ANAPC4	REV__ENSG00000053900|ENST00000315368|ANAPC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3457946777344	2	504.346803	1006.67905	1.0557	0.00053246	-3.8818	-0.0019578	-2.8261	-0.0014253	504.3447732141236	56.244	2.3019	56.803	56.541	58.843	0.55954					121	55	3	0	0	0	0.76764	2	5858	5846;5858		34.173	14.813	1	1272700	+		35179	16393	23310	23319	40137;40138	40138					0.17598141935934564
LTPLLPPLST	10	Unmodified	_LTPLLPPLST_					0	0	0			REV__ENST00000562240.1_1_16:30066238-30075225:+|nuORF	REV__ENST00000562240.1_1_16:30066238-30075225:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3261108398438	2	526.323525	1050.6325	-0.53497	-0.00028157	2.7776	0.0014619	2.2427	0.0011804	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.85251	1	5235	5235		19.997	5.3327	1	220370	+		35180	28793	23311	23320	40139	40139					0.10920657313999982
LTPLPGRGGVL	11	Unmodified	_LTPLPGRGGVL_					0	0	0		ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.2599487304688	2	540.332216	1078.64988	-1.0765	-0.00058166	-2.6483	-0.001431	-3.7248	-0.0020126	540.3307944332548	86.346	1.8091	86.8	86.159	87.968	0.45429					63	43	2	0	0	0	0.14954	1	10188	10188		33.922	1.1092	1	181680			35181	9180	23312	23321	40140	40140					0.11369997639667417
LTPLPGRGGVL	11	Unmodified	_LTPLPGRGGVL_					0	0	0		ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	540.332216	1078.64988	-0.74274	-0.00040132	-2.9904	-0.0016158	-3.7332	-0.0020171	540.3304702845277	86.559	1.8178	86.559	85.951	87.769	0	-0.019992	0.0010345	NaN	33.922	68	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67526			35182	9180	23312	23321							0.11369997639667417
LTPLPGRGGVL	11	Unmodified	_LTPLPGRGGVL_					0	0	0		ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	540.332216	1078.64988	-0.20524	-0.0001109	-3.6629	-0.0019792	-3.8682	-0.0020901	540.3301313776878	86.59	2.0157	86.657	85.772	87.788	0.067444	0.07825	0.00030769	NaN	33.922	72	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118300			35183	9180	23312	23321							0.11369997639667417
LTPLPGRGGVL	11	Unmodified	_LTPLPGRGGVL_					0	0	0		ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	540.332216	1078.64988	1.8455	0.00099718	-5.4995	-0.0029716	-3.6541	-0.0019744	540.329019579328	86.596	1.8833	86.522	85.798	87.681	-0.073891	-0.056319	-0.0016771	NaN	33.922	104	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121830			35184	9180	23312	23321							0.11369997639667417
LTPLPGRGGVL	11	Unmodified	_LTPLPGRGGVL_					0	0	0		ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	540.332216	1078.64988	1.0306	0.00055688	-4.5144	-0.0024393	-3.4838	-0.0018824	540.3294954864712	86.42	1.8462	86.476	85.455	87.302	0.055641	-0.10312	-0.00061244	NaN	33.922	82	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	163240			35185	9180	23312	23321							0.11369997639667417
LTPLPGRGGVL	11	Unmodified	_LTPLPGRGGVL_					0	0	0		ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	540.332216	1078.64988	0.073615	3.9777E-05	-3.6916	-0.0019947	-3.618	-0.0019549	540.3300781652705	86.294	1.7796	86.487	85.798	87.578	0.19378	-0.091279	0.00027668	NaN	33.922	94	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	175400			35186	9180	23312	23321							0.11369997639667417
LTPLPGRGGVL	11	Unmodified	_LTPLPGRGGVL_					0	0	0		ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	540.332216	1078.64988	0.71443	0.00038603	-4.2192	-0.0022798	-3.5048	-0.0018938	540.3298254095788	86.525	1.5661	86.674	86.03	87.596	0.14902	0.094965	-0.00029349	NaN	33.922	79	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130490			35187	9180	23312	23321							0.11369997639667417
LTPLPGRGGVL	11	Unmodified	_LTPLPGRGGVL_					0	0	0		ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	ENST00000222990.7_1_7:2293201-2294050:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	540.332216	1078.64988	-1.4318	-0.00077366	-1.8982	-0.0010257	-3.3301	-0.0017993	540.3309070278257	86.188	1.5362	86.347	85.847	87.383	0.15851	-0.23206	0.0022147	NaN	33.922	93	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128120			35188	9180	23312	23321							0.11369997639667417
LTPLQFMSL	9	Unmodified	_LTPLQFMSL_					0	0	0			REV__ENSG00000138083|ENST00000260653|SIX3	REV__ENSG00000138083|ENST00000260653|SIX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.287109375	2	525.288628	1048.5627	0.012653	6.6464E-06	-3.9814	-0.0020914	-3.9687	-0.0020847	525.2863014692597	54.711	0.66651	54.703	54.455	55.121	-0.0077095					27	21	2	0	0	0	0.71772	1	4843	4843		39.253	1.4413	1	122150	+		35189	19439	23313	23322	40141	40141					0.04036455373739045
LTPPRGLQVS	10	Unmodified	_LTPPRGLQVS_					0	0	0		ENSG00000184985|ENST00000507866|SORCS2	ENSG00000184985|ENST00000507866|SORCS2	ENSG00000184985|ENST00000507866|SORCS2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.3138427734375	2	534.314023	1066.61349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.073	1	65.627	65.127	66.127	0.55386								0	0	0	0.45132	1	7075	7075		27.047	0.3544	1				35190	7662	23314	23323	40142	40142					0.08285120742925756
LTPPRPLD	8	Unmodified	_LTPPRPLD_					0	0	0			REV__ENST00000271857.6_1_1:153749171-153750656:+|nuORF	REV__ENST00000271857.6_1_1:153749171-153750656:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.7688903808594	2	454.763635	907.512717	-0.74431	-0.00033849	1.0343	0.00047038	0.29002	0.00013189	454.7639094302891	49.471	0.88532	49.447	49.014	49.9	-0.024033					24	19	2	0	0	0	0.4196	1	4216	4216		44.117	13.613	1	66991	+		35191	24537	23315	23324	40143	40143					0.055260887600866226
LTPPRQFV	8	Unmodified	_LTPPRQFV_					0	0	0			REV__nc|ENSG00000108798|Q9P2A4-2|ABI3	REV__nc|ENSG00000108798|Q9P2A4-2|ABI3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27752685546875	2	479.279452	956.544351	-0.72512	-0.00034753	-3.4808	-0.0016683	-4.2059	-0.0020158	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.88915	1	9602	9602		35.201	1.6851	1	1822400	+		35192	17732	23316	23325	40144	40144					0.0643408151404401
LTPQEGVKE	9	Unmodified	_LTPQEGVKE_					0	0	0			REV__nc|ENSG00000136688|Q9NZH8-2|IL36G	REV__nc|ENSG00000136688|Q9NZH8-2|IL36G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.7691650390625	2	500.769114	999.523675	0.16011	8.0176E-05	-0.20524	-0.00010278	-0.04513	-2.26E-05	500.76872534727096	38.114	0.44948	38.056	37.894	38.344	-0.057915					21	12	2	0	0	0	0.64555	1	2235	2235		44.377	7.2181	1	102890	+		35193	19325	23317	23326	40145	40145					0.023894463437159175
LTPQGGLH	8	Unmodified	_LTPQGGLH_					0	0	0			REV__nc|ENSG00000110422|Q9H422-2|HIPK3	REV__nc|ENSG00000110422|Q9H422-2|HIPK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.7266540527344	2	411.727052	821.439552	0.12127	4.9929E-05	-1.4911	-0.00061393	-1.3698	-0.000564	411.72626689698353	63.154	0.99355	63.542	63.055	64.049	0.3878					36	22	2	0	0	0	0.89962	1	6796	6796		38.806	6.8513	1	173990	+		35194	17811	23318	23327	40146	40146					0.021689600374770635
LTPQGGLH	8	Unmodified	_LTPQGGLH_					0	0	0			REV__nc|ENSG00000110422|Q9H422-2|HIPK3	REV__nc|ENSG00000110422|Q9H422-2|HIPK3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	411.727052	821.439552	0.12127	4.9929E-05	-1.4911	-0.00061393	-1.3698	-0.000564	411.72626689698353	63.154	0.99355	63.542	63.055	64.049	0.3878	0.041853	-8.6824E-06	NaN	38.806	36	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173990	+		35195	17811	23318	23327							0.021689600374770635
LTPQGGLH	8	Unmodified	_LTPQGGLH_					0	0	0			REV__nc|ENSG00000110422|Q9H422-2|HIPK3	REV__nc|ENSG00000110422|Q9H422-2|HIPK3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	411.727052	821.439552	0.11993	4.9378E-05	-1.4739	-0.00060682	-1.3539	-0.00055745	411.72628761383294	62.903	1.0103	63.458	62.993	64.003	0.55449	-0.041853	5.527E-06	NaN	38.806	38	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161220	+		35196	17811	23318	23327							0.021689600374770635
LTPRSGTTPK	10	Unmodified	_LTPRSGTTPK_					0	0	0		ENSG00000096401|ENST00000371477|CDC5L	ENSG00000096401|ENST00000371477|CDC5L	ENSG00000096401|ENST00000371477|CDC5L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7811889648438	2	529.303655	1056.59276	0.22638	0.00011982	3.9189	0.0020743	4.1453	0.0021941	529.3054568693616	52.328	0.20363	52.996	52.84	53.044	0.66729					6	4	2	0	0	0	0.37624	1	5258	5258		29.17	0	1	144460			35197	1740	23319	23328	40147	40147					0.0667253036326656
LTPSNFPSPN	10	Unmodified	_LTPSNFPSPN_					0	0	0		ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	537.2686767578125	2	537.266739	1072.51892	-0.12848	-6.903E-05	-0.27867	-0.00014972	-0.40715	-0.00021875	537.2664531140339	59.25	1.1059	59.237	58.717	59.823	-0.013729					58	32	3	0	0	0	0.86348	1	5407	5407		31.53	0	1	460930			35198	7607	23320	23329	40148	40148					-0.014434377990482972
LTPTEKPTN	9	Unmodified	_LTPTEKPTN_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.7690124511719	2	500.769114	999.523675	-0.60094	-0.00030093	0.97945	0.00049048	0.37851	0.00018955	500.7690103575332	38.291	0.52662	38.307	38.07	38.597	0.016563					21	14	2	0	0	0	0.44421	1	2258	2258		54.776	7.119	1	73705			35199	5428	23321	23330	40149	40149					0.023894463437045488
LTPTEKPTN	9	Unmodified	_LTPTEKPTN_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	500.769114	999.523675	-1.002	-0.00050176	1.3121	0.00065706	0.31012	0.0001553	500.7693345833645	38.199	0.65639	38.148	37.806	38.462	-0.050369	-0.055889	6.474E-05	NaN	54.776	26	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106690			35200	5428	23321	23330							0.023894463437045488
LTPTEKPTN	9	Unmodified	_LTPTEKPTN_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	500.769114	999.523675	0.23845	0.00011941	0.20802	0.00010417	0.44647	0.00022358	500.76914100854236	38.199	0.50917	38.293	37.957	38.467	0.094322	0.088859	-0.001041	NaN	54.776	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91798			35201	5428	23321	23330							0.023894463437045488
LTPTEKPTN	9	Unmodified	_LTPTEKPTN_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	500.769114	999.523675	0.16011	8.0176E-05	-0.20524	-0.00010278	-0.04513	-2.26E-05	500.76872534727096	38.114	0.44948	38.056	37.894	38.344	-0.057915	-0.14787	-0.0014549	NaN	54.776	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102890			35202	5428	23321	23330							0.023894463437045488
LTPVLREE	8	Unmodified	_LTPVLREE_					0	0	0		ENST00000514667.1_1_5:130940379-131080327:-|nuORF;ENST00000307954.12_1_5:131055067-131080342:-|nuORF;ENST00000510461.5_1_5:131066679-131080342:-|nuORF	ENST00000514667.1_1_5:130940379-131080327:-|nuORF	ENST00000514667.1_1_5:130940379-131080327:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.7757568359375	2	478.7742	955.533846	-0.43892	-0.00021015	4.1087	0.0019672	3.6698	0.001757	478.7762158918014	34.023	0.56537	33.967	33.697	34.262	-0.056385					21	12	2	0	0	0	0.90089	1	2103	2103		39.253	0.44669	1	44748			35203	9880	23322	23331	40150	40150					0.0543005406894963
LTQHWHLKTP	10	Unmodified	_LTQHWHLKTP_					0	0	0		nc|ENSG00000144481|Q7Z2W7-3|TRPM8;ENSG00000144481|ENST00000324695|TRPM8	nc|ENSG00000144481|Q7Z2W7-3|TRPM8	nc|ENSG00000144481|Q7Z2W7-3|TRPM8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	630.8497314453125	2	630.846022	1259.67749	2.85	0.0017979	3.0606	0.0019308	5.9106	0.0037287	630.8477214787887	110.77	1.3958	110.74	110.48	111.87	-0.026314					127	46	4	0	0	0	0.86348	1	12304	12304		31.53	1.0262	1	751460			35204	4712	23323	23332	40151	40151					0.058039008998548525
LTQHWHLKTP	10	Unmodified	_LTQHWHLKTP_					0	0	0		nc|ENSG00000144481|Q7Z2W7-3|TRPM8;ENSG00000144481|ENST00000324695|TRPM8	nc|ENSG00000144481|Q7Z2W7-3|TRPM8	nc|ENSG00000144481|Q7Z2W7-3|TRPM8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	630.8493041992188	2	630.846022	1259.67749	0.93042	0.00058695	4.3463	0.0027418	5.2767	0.0033288	630.8485742155608	110.42	0.71348	110.5	110.27	110.98	0.073685					52	20	4	0	0	0	0.8608	1	11866	11866		34.173	1.3601	1	2069700			35205	4712	23323	23332	40152	40152					0.058039008998548525
LTQKETMAQE	10	Unmodified	_LTQKETMAQE_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.7875366210938	2	589.789721	1177.56489	-0.32914	-0.00019412	-2.5137	-0.0014825	-2.8428	-0.0016767	589.7881126572679	30.566	0.63951	30.591	30.296	30.936	0.025013					41	19	3	0	0	0	0.85981	1	1612	1612		35.152	2.3396	1	124060	+		35206	16310	23324	23333	40153	40153					-0.01679160679123015
LTQPWRLHVNM	11	Unmodified	_LTQPWRLHVNM_					0	0	0		nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;nc|ENSG00000164944|Q69YN4-4|VIRMA	nc|ENSG00000164944|Q69YN4-2|VIRMA	nc|ENSG00000164944|Q69YN4-2|VIRMA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.5851135253906	3	465.583568	1393.72887	0.030923	1.4397E-05	1.4453	0.00067291	1.4762	0.00068731	465.5842632332639	38.599	0.68763	38.546	38.113	38.8	-0.052727					38	20	3	0	0	0	0.76087	1	2283	2283		19.627	1.0959	1	151350			35207	6028	23325	23334	40154	40154					0.047759016022837386
LTQSAGSWS	9	Unmodified	_LTQSAGSWS_					0	0	0			REV__nc|ENSG00000105672|O00321-2|ETV2	REV__nc|ENSG00000105672|O00321-2|ETV2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.72235107421875	2	468.724707	935.43486	-0.11529	-5.4041E-05	-2.8561	-0.0013387	-2.9714	-0.0013928	468.72325179704643	70.294	0.65192	70.325	70.151	70.803	0.030495					39	32	2	0	0	0	0.76764	1	6652	6652		34.173	2.2177	1	391400	+		35208	29759	23326	23335	40155	40155					-0.03543968895939997
LTQVEESAL	9	Unmodified	_LTQVEESAL_					0	0	0		ENSG00000095464|ENST00000371447|PDE6C	ENSG00000095464|ENST00000371447|PDE6C	ENSG00000095464|ENST00000371447|PDE6C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.25970458984375	2	495.261122	988.507691	1.1508	0.00056992	-3.3281	-0.0016483	-2.1773	-0.0010783	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.78536	1	2776	2776		29.15	1.2673	1	3842700			35209	1727	23327	23336	40156	40156					0.012977401068042127
LTRALSRAMA	10	Unmodified	_LTRALSRAMA_					0	0	0		nc|ENSG00000104687|P00390-5|GSR;nc|ENSG00000104687|P00390-4|GSR;nc|ENSG00000104687|P00390-3|GSR;ENSG00000104687|ENST00000221130|GSR	nc|ENSG00000104687|P00390-5|GSR	nc|ENSG00000104687|P00390-5|GSR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.316650390625	2	545.3135	1088.61245	1.9901	0.0010853	3.8799	0.0021158	5.87	0.003201	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.76096	1	9288	9288		41.427	2.6205	1	4704900			35210	2140	23328	23337	40157	40157					0.07168583102384218
LTRANKPAS	9	Unmodified	_LTRANKPAS_					0	0	0			REV__ENSG00000184292|ENST00000371225|TACSTD2	REV__ENSG00000184292|ENST00000371225|TACSTD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2776184082031	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.7932	1	8301	8301		24.519	0.31644	1	4644500	+		35211	22660	23329	23338	40158	40158					0.06031992020314192
LTRANKPAS	9	Unmodified	_LTRANKPAS_					0	0	0			REV__ENSG00000184292|ENST00000371225|TACSTD2	REV__ENSG00000184292|ENST00000371225|TACSTD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27813720703125	2	479.277441	956.540328	-0.098244	-4.7086E-05	0.019792	9.4859E-06	-0.078452	-3.76E-05	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.71772	1	8784	8784		39.253	3.6345	1	6799600	+		35212	22660	23329	23338	40159	40159					0.06031992020314192
LTRANKPAS	9	Unmodified	_LTRANKPAS_					0	0	0			REV__ENSG00000184292|ENST00000371225|TACSTD2	REV__ENSG00000184292|ENST00000371225|TACSTD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27752685546875	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.71772	1	8935	8935		39.253	7.298	1	7289200	+		35213	22660	23329	23338	40160	40160					0.06031992020314192
LTRANKPAS	9	Unmodified	_LTRANKPAS_					0	0	0			REV__ENSG00000184292|ENST00000371225|TACSTD2	REV__ENSG00000184292|ENST00000371225|TACSTD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27777099609375	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.71772	1	8447	8447		39.253	3.6345	1	6441000	+		35214	22660	23329	23338	40161	40161					0.06031992020314192
LTRANKPAS	9	Unmodified	_LTRANKPAS_					0	0	0			REV__ENSG00000184292|ENST00000371225|TACSTD2	REV__ENSG00000184292|ENST00000371225|TACSTD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2779846191406	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.77696	1	9801	9801		31.53	1.0262	1	5642300	+		35215	22660	23329	23338	40162	40162					0.06031992020314192
LTRANKPAS	9	Unmodified	_LTRANKPAS_					0	0	0			REV__ENSG00000184292|ENST00000371225|TACSTD2	REV__ENSG00000184292|ENST00000371225|TACSTD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27752685546875	2	479.277441	956.540328	-0.72512	-0.00034753	0.71589	0.00034311	-0.0092246	-4.4211E-06	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.7932	1	9644	9644		25.574	2.5316	1	1822400	+		35216	22660	23329	23338	40163	40163					0.06031992020314192
LTRAPQQTG	9	Unmodified	_LTRAPQQTG_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2670593261719	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.66686	3	8272	8272;8318;8377		42.864	5.0528	1	1182200	+		35217	20207	23330	23339	40164;40165;40166	40164					0.033154016406683695
LTRAPQQTG	9	Unmodified	_LTRAPQQTG_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.26708984375	2	486.267073	970.519593	-0.087647	-4.262E-05	0.30406	0.00014785	0.21641	0.00010523	486.26710603472304	86.356	4.0954	86.423	85.117	89.212	0.067444					314	95	4	0	0	0	0.54908	4	8658	8658;8670;8765;8867		49.536	13.918	1	1700900	+		35218	20207	23330	23339	40167;40168;40169;40170	40167					0.033154016406683695
LTRAPQQTG	9	Unmodified	_LTRAPQQTG_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.26708984375	2	486.267073	970.519593	1.0382	0.00050483	-0.85752	-0.00041699	0.18065	8.7843E-05	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.64555	3	8891	8879;8891;8927		44.377	6.2746	1	1819100	+		35219	20207	23330	23339	40171;40172;40173	40172					0.033154016406683695
LTRAPQQTG	9	Unmodified	_LTRAPQQTG_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.2669677734375	2	486.267073	970.519593	-1.0938	-0.00053186	1.2715	0.00061828	0.17773	8.6424E-05	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.64555	4	8730	8730;8761;8791;8973		44.377	12.847	1	1852700	+		35220	20207	23330	23339	40174;40175;40176;40177	40174					0.033154016406683695
LTRAPQQTG	9	Unmodified	_LTRAPQQTG_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.2671813964844	2	486.267073	970.519593	-0.72648	-0.00035326	0.90847	0.00044176	0.182	8.8499E-05	486.2674012957117	86.085	5.1254	86.27	85.016	90.141	0.18522					327	120	4	0	0	0	0.64555	3	8603	8394;8406;8603		44.377	4.0801	1	1830000	+		35221	20207	23330	23339	40178;40179;40180	40180					0.033154016406683695
LTRAPQQTG	9	Unmodified	_LTRAPQQTG_					0	0	0			REV__ENSG00000150361|ENST00000377844|KLHL1	REV__ENSG00000150361|ENST00000377844|KLHL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.26702880859375	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.48102	1	8427	8427		52.937	12.159	1	1702800	+		35222	20207	23330	23339	40181	40181					0.033154016406683695
LTRAYNKAS	9	Unmodified	_LTRAYNKAS_					0	0	0		nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2813720703125	2	512.282723	1022.55089	-0.3427	-0.00017556	-2.3981	-0.0012285	-2.7408	-0.0014041	512.2814243636773	86.125	3.8841	86.31	84.842	88.726	0.18523					170	91	2	0	0	0	0.73802	1	8503	8503		37.812	3.639	1	381930			35223	14976	23331	23340	40182	40182					0.040519746747463614
LTRDKKLTG	9	Unmodified	_LTRDKKLTG_					0	0	0			REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3140869140625	2	516.314023	1030.61349	-0.047196	-2.4368E-05	-0.36182	-0.00018681	-0.40901	-0.00021118	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.77244	1	10652	10652		32.812	1.2826	1	63062000	+		35224	21784	23332	23341	40183	40183					0.09941120742928433
LTRDKKLTG	9	Unmodified	_LTRDKKLTG_					0	0	0			REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3137817382812	2	516.314023	1030.61349	-1.5618	-0.0008064	1.1232	0.00057995	-0.4386	-0.00022645	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.75725	1	10454	10454		36.447	4.9169	1	66055000	+		35225	21784	23332	23341	40184	40184					0.09941120742928433
LTRDKTVVSA	10	Unmodified	_LTRDKTVVSA_					0	0	0		ENST00000483704.5_1_17:17207728-17250258:+|nuORF;ENSG00000205309|ENST00000389022|NT5M	ENST00000483704.5_1_17:17207728-17250258:+|nuORF	ENST00000483704.5_1_17:17207728-17250258:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3165283203125	2	545.316763	1088.61897	-0.0069207	-3.774E-06	0.033442	1.8237E-05	0.026521	1.4463E-05	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.85981	1	10352	10352		35.152	2.3396	1	4868200			35226	8524	23333	23342	40185	40185					0.07820799534783873
LTRFIHFGV	9	Unmodified	_LTRFIHFGV_					0	0	0			REV__nc|ENSG00000107593|Q9P0L9-4|PKD2L1	REV__nc|ENSG00000107593|Q9P0L9-4|PKD2L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.31689453125	2	545.313826	1088.6131	1.1684	0.00063715	4.0853	0.0022278	5.2537	0.0028649	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.76764	1	8984	8984		34.173	5.0025	1	4705800	+		35227	17665	23334	23343	40186	40186					0.0723374581373264
LTRFIHFGV	9	Unmodified	_LTRFIHFGV_					0	0	0			REV__nc|ENSG00000107593|Q9P0L9-4|PKD2L1	REV__nc|ENSG00000107593|Q9P0L9-4|PKD2L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.3170166015625	2	545.313826	1088.6131	0.73644	0.00040159	4.4708	0.002438	5.2073	0.0028396	545.316117867523	88.493	3.0395	88.643	86.614	89.654	0.15055					258	71	4	0	0	0	0.73802	2	8680	8680;8703		37.812	7.4938	1	5181100	+		35228	17665	23334	23343	40187;40188	40187					0.0723374581373264
LTRFINVSI	9	Unmodified	_LTRFINVSI_					0	0	0			REV__nc|ENSG00000068971|Q15173-2|PPP2R5B	REV__nc|ENSG00000068971|Q15173-2|PPP2R5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8165893554688	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.51592	1	8401	8401		51.193	11.94	1	1422300	+		35229	16571	23335	23344	40189	40189					0.09498308748334239
LTRFLALSVVC	11	Unmodified	_LTRFLALSVVC_					0	0	0			REV__ENSG00000164142|ENST00000435205|FHIP1A	REV__ENSG00000164142|ENST00000435205|FHIP1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3528442382812	2	611.354834	1220.69511	-0.25907	-0.00015838	2.238	0.0013682	1.9789	0.0012098	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.7144	1	9307	9307		29.17	1.0886	1	3360200	+		35230	21038	23336	23345	40190	40190					0.09359480110538243
LTRFLALSVVC	11	Unmodified	_LTRFLALSVVC_					0	0	0			REV__ENSG00000164142|ENST00000435205|FHIP1A	REV__ENSG00000164142|ENST00000435205|FHIP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3543090820312	2	611.354834	1220.69511	-0.40518	-0.00024771	2.2197	0.001357	1.8145	0.0011093	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.62614	2	9921	9921;9946		41.427	3.6151	1	5373200	+		35231	21038	23336	23345	40191;40192	40191					0.09359480110538243
LTRFLALSVVC	11	Unmodified	_LTRFLALSVVC_					0	0	0			REV__ENSG00000164142|ENST00000435205|FHIP1A	REV__ENSG00000164142|ENST00000435205|FHIP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3539428710938	2	611.354834	1220.69511	2.4219	0.0014807	0.063844	3.9032E-05	2.4858	0.0015197	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.66929	1	10171	10171		36.447	2.2742	1	12656000	+		35232	21038	23336	23345	40193	40193					0.09359480110538243
LTRFLALSVVC	11	Unmodified	_LTRFLALSVVC_					0	0	0			REV__ENSG00000164142|ENST00000435205|FHIP1A	REV__ENSG00000164142|ENST00000435205|FHIP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3536987304688	2	611.354834	1220.69511	0.21559	0.0001318	1.6628	0.0010166	1.8784	0.0011484	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.67778	1	9929	9929		35.152	2.3396	1	5379900	+		35233	21038	23336	23345	40194	40194					0.09359480110538243
LTRFLALSVVC	11	Unmodified	_LTRFLALSVVC_					0	0	0			REV__ENSG00000164142|ENST00000435205|FHIP1A	REV__ENSG00000164142|ENST00000435205|FHIP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.35400390625	2	611.354834	1220.69511	0.21646	0.00013233	2.3298	0.0014243	2.5463	0.0015567	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.60058	2	10050	10050;10216		44.377	2.5251	1	12399000	+		35234	21038	23336	23345	40195;40196	40195					0.09359480110538243
LTRFLALSVVC	11	Unmodified	_LTRFLALSVVC_					0	0	0			REV__ENSG00000164142|ENST00000435205|FHIP1A	REV__ENSG00000164142|ENST00000435205|FHIP1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3562622070312	2	611.354834	1220.69511	1.1383	0.00069592	0.67847	0.00041479	1.8168	0.0011107	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.66929	3	9563	9563;9587;9661		36.447	3.6343	1	7316900	+		35235	21038	23336	23345	40197;40198;40199	40197					0.09359480110538243
LTRFLALSVVC	11	Unmodified	_LTRFLALSVVC_					0	0	0			REV__ENSG00000164142|ENST00000435205|FHIP1A	REV__ENSG00000164142|ENST00000435205|FHIP1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3548583984375	2	611.354834	1220.69511	1.142	0.00069816	1.5785	0.00096504	2.7205	0.0016632	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.7144	1	9733	9733		29.17	1.0886	1	17478000	+		35236	21038	23336	23345	40200	40200					0.09359480110538243
LTRFLALSVVC	11	Unmodified	_LTRFLALSVVC_					0	0	0			REV__ENSG00000164142|ENST00000435205|FHIP1A	REV__ENSG00000164142|ENST00000435205|FHIP1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3545532226562	2	611.354834	1220.69511	-1.2523	-0.00076561	3.1276	0.0019121	1.8753	0.0011465	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.68532	2	9646	9509;9646		33.922	1.1477	1	5978100	+		35237	21038	23336	23345	40201;40202	40202					0.09359480110538243
LTRFTKEIV	9	Unmodified	_LTRFTKEIV_					0	0	0			REV__ENSG00000180423|ENST00000326737|HARBI1	REV__ENSG00000180423|ENST00000326737|HARBI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8299560546875	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.73802	1	8894	8894		37.812	0	1	1844500	+		35238	22396	23337	23346	40203	40203					0.10094577919812764
LTRGQSLSKMA	11	Unmodified	_LTRGQSLSKMA_					0	0	0		ENST00000392546.6_1_2:175462429-175462504:-|nuORF	ENST00000392546.6_1_2:175462429-175462504:-|nuORF	ENST00000392546.6_1_2:175462429-175462504:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.3323974609375	2	596.329347	1190.64414	1.5761	0.00093988	4.4777	0.0026702	6.0538	0.0036101	596.3318720869813	95.913	2.9437	96.333	95.271	98.215	0.4205					211	71	4	0	0	0	0.69931	1	11492	11492		31.634	1.3165	1	1079900			35239	11025	23338	23347	40204	40204					0.05644531065695446
LTRHKAIHTG	10	Unmodified	_LTRHKAIHTG_					0	0	0		ENSG00000213973|ENST00000596209|ZNF99;ENSG00000196350|ENST00000601693|ZNF729	ENSG00000213973|ENST00000596209|ZNF99	ENSG00000213973|ENST00000596209|ZNF99	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3299560546875	2	567.330539	1132.64652	1.8589	0.0010546	-3.1789	-0.0018035	-1.32	-0.00074889	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86348	1	9754	9754		31.53	4.8369	1	15439000			35240	8040	23339	23348	40205	40205					0.08550747585650242
LTRHKAIHTG	10	Unmodified	_LTRHKAIHTG_					0	0	0		ENSG00000213973|ENST00000596209|ZNF99;ENSG00000196350|ENST00000601693|ZNF729	ENSG00000213973|ENST00000596209|ZNF99	ENSG00000213973|ENST00000596209|ZNF99	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3294067382812	2	567.330539	1132.64652	0.79571	0.00045143	-2.2136	-0.0012558	-1.4178	-0.00080439	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.8545	1	9428	9428		36.447	1.2947	1	18145000			35241	8040	23339	23348	40206	40206					0.08550747585650242
LTRIFVMIPK	10	Unmodified	_LTRIFVMIPK_					0	0	0		nc|ENSG00000155636|Q8IUH3-2|RBM45;ENST00000424000.6_1_2:178977216-178988379:+|nuORF;ENSG00000155636|ENST00000286070|RBM45;nc|ENSG00000155636|Q8IUH3|RBM45	nc|ENSG00000155636|Q8IUH3-2|RBM45	nc|ENSG00000155636|Q8IUH3-2|RBM45	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.921875	3	406.586138	1216.73659	0.5758	0.00023411	3.1798	0.0012929	3.7556	0.001527	406.5873508642622	24.247	1.5285	24.302	23.869	25.398	0.055485					100	43	4	0	0	0	0.86225	1	942	942		32.751	8.5187	1	404210			35242	5332	23340	23349	40207	40207					0.13688660869865998
LTRIKHLKEN	10	Unmodified	_LTRIKHLKEN_					0	0	0			REV__nc|ENSG00000288520|G9CGD6-3|CNK3	REV__nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.92230224609375	3	417.922578	1250.7459	-0.96194	-0.00040202	0.30568	0.00012775	-0.65627	-0.00027427	417.922646807868	105.95	2.4445	105.95	105.29	107.73	0					194	56	4	0	0	0	0.8486	1	10988	10988		23.378	11.446	1	9358100	+		35243	30287	23341	23350	40208	40208					0.13056145479754377
LTRIKHLKEN	10	Unmodified	_LTRIKHLKEN_					0	0	0			REV__nc|ENSG00000288520|G9CGD6-3|CNK3	REV__nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.92254638671875	3	417.922578	1250.7459	-1.7716	-0.00074038	1.1592	0.00048446	-0.61238	-0.00025593	417.92308931399344	105.49	2.9586	105.65	104.79	107.75	0.15925					261	73	4	0	0	0	0.85834	2	11323	11227;11323		29.551	6.9892	1	33626000	+		35244	30287	23341	23350	40209;40210	40210					0.13056145479754377
LTRIKHLKEN	10	Unmodified	_LTRIKHLKEN_					0	0	0			REV__nc|ENSG00000288520|G9CGD6-3|CNK3	REV__nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.9223327636719	3	417.922578	1250.7459	0.73411	0.0003068	-1.4619	-0.00061096	-0.7278	-0.00030416	417.9219647760214	105.64	2.8346	105.75	104.94	107.78	0.10766					247	69	5	0	0	0	0.8486	2	11302	11230;11302		30.569	0	1	29053000	+		35245	30287	23341	23350	40211;40212	40212					0.13056145479754377
LTRIKHLKEN	10	Unmodified	_LTRIKHLKEN_					0	0	0			REV__nc|ENSG00000288520|G9CGD6-3|CNK3	REV__nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.9220886230469	3	417.922578	1250.7459	2.409	0.0010068	-3.2333	-0.0013513	-0.82426	-0.00034448	417.9211491012133	105.29	1.9486	105.45	104.96	106.91	0.15584					170	67	4	0	0	0	0.86409	1	12812	12812		25.126	0.85006	1	526200	+		35246	30287	23341	23350	40213	40213					0.13056145479754377
LTRIKYHK	8	Unmodified	_LTRIKYHK_					0	0	0			REV__nc|ENSG00000101336|P08631-3|HCK	REV__nc|ENSG00000101336|P08631-3|HCK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2418823242188	2	529.827101	1057.63965	0.05522	2.9257E-05	2.575	0.0013643	2.6302	0.0013935	529.8284093521079	34.131	0.57044	34.074	33.785	34.355	-0.056385					17	12	2	0	0	0	0.4196	1	2141	2141		49.442	34.577	1	36146	+		35247	17268	23342	23351	40214	40214					0.11313434705061809
LTRKKMSKR	9	Unmodified	_LTRKKMSKR_					0	0	0			REV__ENST00000534928.5_1_9:37126450-37126552:+|nuORF	REV__ENST00000534928.5_1_9:37126450-37126552:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3557739257812	2	574.358242	1146.70193	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.29	1	100.29	99.786	100.79	0								0	0	0	0.3041	1	10164	10164		29.17	1.0886	1		+		35248	28374	23343	23352	40215	40215					0.1344483778175345
LTRKLSQRPT	10	Unmodified	_LTRKLSQRPT_					0	0	0		nc|ENSG00000204138|Q8IZ21-3|PHACTR4;ENSG00000204138|ENST00000373839|PHACTR4;nc|ENSG00000204138|Q8IZ21-2|PHACTR4;ENST00000493669.2_1_1:28816384-28823058:+|nuORF;ENSG00000112137|ENST00000332995|PHACTR1	nc|ENSG00000204138|Q8IZ21-3|PHACTR4;ENSG00000112137|ENST00000332995|PHACTR1	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.58160400390625	3	400.578811	1198.7146	5.5428	0.0022203	-1.2854	-0.00051489	4.2574	0.0017054	400.57819432887953	111.82	0.52379	111.85	111.7	112.22	0.032707					48	18	4	0	0	0	0.86549	1	13593	13593		29.551	2.5034	1	3019100			35249	8418;2633	23344	23353	40216	40216					0.12319572445630911
LTRKRERVLA	10	Unmodified	_LTRKRERVLA_					0	0	0			REV__ENST00000533901.1_1_11:16808724-16810828:-|nuORF	REV__ENST00000533901.1_1_11:16808724-16810828:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3935546875	2	621.39367	1240.77279	-0.078752	-4.8936E-05	-1.4235	-0.00088457	-1.5023	-0.0009335	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.8651	1	11062	11062		25.574	0	1	10411000	+		35250	21311	23345	23354	40217	40217					0.1620325409094221
LTRKRPFFV	9	Unmodified	_LTRKRPFFV_					0	0	0		ENST00000078429.8_1_19:3122902-3123160:+|nuORF	ENST00000078429.8_1_19:3122902-3123160:+|nuORF	ENST00000078429.8_1_19:3122902-3123160:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3533935546875	2	582.356025	1162.6975	-0.84092	-0.00048972	-3.5778	-0.0020836	-4.4187	-0.0025733	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.77696	1	11266	11266		31.53	3.6476	1	77752000			35251	9077	23346	23355	40218	40218					0.12265696630493039
LTRLFQLVMD	10	Unmodified	_LTRLFQLVMD_					0	0	0			REV__nc|ENSG00000188986|Q8WX92|NELFB	REV__nc|ENSG00000188986|Q8WX92|NELFB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.3462524414062	2	618.344466	1234.67438	-0.32375	-0.00020019	2.6984	0.0016685	2.3747	0.0014684	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.80179	1	10446	10446		39.253	3.6345	1	926440	+		35252	23049	23347	23356	40219	40219					0.06642889730869683
LTRLFQLVMD	10	Unmodified	_LTRLFQLVMD_					0	0	0			REV__nc|ENSG00000188986|Q8WX92|NELFB	REV__nc|ENSG00000188986|Q8WX92|NELFB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.349365234375	2	618.344466	1234.67438	2.5351	0.0015676	-0.2636	-0.000163	2.2715	0.0014046	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.67571	1	10704	10704		45.972	5.3996	1	980120	+		35253	23049	23347	23356	40220	40220					0.06642889730869683
LTRLFRVF	8	Unmodified	_LTRLFRVF_					0	0	0		ENSG00000142961|ENST00000319928|MOB3C	ENSG00000142961|ENST00000319928|MOB3C	ENSG00000142961|ENST00000319928|MOB3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3234252929688	2	526.324194	1050.63383	0.40668	0.00021404	0.48959	0.00025768	0.89627	0.00047173	526.3244210933225	54.258	1.1209	54.34	53.569	54.69	0.081524					41	28	2	0	0	0	0.87479	1	4506	4506		30.504	8.8013	1	211010			35254	4593	23348	23357	40221	40221					0.11054336193410563
LTRLFRVF	8	Unmodified	_LTRLFRVF_					0	0	0		ENSG00000142961|ENST00000319928|MOB3C	ENSG00000142961|ENST00000319928|MOB3C	ENSG00000142961|ENST00000319928|MOB3C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	526.324194	1050.63383	0.16209	8.5311E-05	1.1816	0.00062189	1.3437	0.0007072	526.3246110796304	54.359	2.2076	54.384	53.296	55.503	0.025047	0.022063	0.0002713	NaN	30.504	93	63	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85508			35255	4593	23348	23357							0.11054336193410563
LTRLLGKPPKL	11	Unmodified	_LTRLLGKPPKL_					0	0	0		ENST00000522846.1_1_8:29048390-29120551:-|nuORF	ENST00000522846.1_1_8:29048390-29120551:-|nuORF	ENST00000522846.1_1_8:29048390-29120551:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.8489379882812	2	618.41354	1234.81253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.601	1	32.601	32.101	33.101	0								0	0	0	0.56276	1	1635	1635		14.137	4.4315	1				35256	13194	23349	23358	40222	40222					0.20451381041652894
LTRLVRAQP	9	Unmodified	_LTRLVRAQP_					0	0	0			REV__ENST00000460510.5_1_10:90750722-90750905:+|nuORF	REV__ENST00000460510.5_1_10:90750722-90750905:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.800048828125	2	527.330008	1052.64546	0.094425	4.9793E-05	-1.2479	-0.00065808	-1.1535	-0.00060829	527.3289644763503	61.875	0.12911	62.429	62.342	62.472	0.55386					4	2	2	0	0	0	0.20789	1	6622	6622		19.997	0	1	15667	+		35257	27006	23350	23359	40223	40223					0.12124533216751843
LTRLYLTIL	9	Unmodified	_LTRLYLTIL_					0	0	0		ENSG00000183695|ENST00000329773|MRGPRX2	ENSG00000183695|ENST00000329773|MRGPRX2	ENSG00000183695|ENST00000329773|MRGPRX2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.3324584960938	2	553.352617	1104.69068	0.81777	0.00045251	-3.0495	-0.0016875	-2.2318	-0.001235	553.3506123346365	96.694	0.17397	96.857	96.748	96.922	0.16316					5	3	2	0	0	0	0.20789	1	9961	9961		24.519	6.2571	1	19879			35258	7551	23351	23360	40224	40224					0.14252338959272493
LTRLYVIPS	9	Unmodified	_LTRLYVIPS_					0	0	0			REV__ENSG00000027644|ENST00000368195|INSRR	REV__ENSG00000027644|ENST00000368195|INSRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.3190307617188	2	531.321317	1060.62808	-0.04293	-2.281E-05	-3.6344	-0.001931	-3.6773	-0.0019538	531.3190516758626	94.867	1.8687	95.098	94.611	96.479	0.23103					163	44	5	0	0	0	0.73802	1	9737	9737		37.812	0.65241	1	2940800	+		35259	16264	23352	23361	40225	40225					0.10019192891104467
LTRNFRKTK	9	Unmodified	_LTRNFRKTK_					0	0	0		ENST00000367576.5_1_6:144184667-144184769:+|nuORF	ENST00000367576.5_1_6:144184667-144184769:+|nuORF	ENST00000367576.5_1_6:144184667-144184769:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533325195312	2	582.354014	1162.69348	0.15817	9.2113E-05	-1.1126	-0.00064794	-0.95444	-0.00055582	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.78912	1	11316	11316		28.081	2.5074	1	78004000			35260	10556	23353	23362	40226	40226					0.1186360713677459
LTRNFRKTK	9	Unmodified	_LTRNFRKTK_					0	0	0		ENST00000367576.5_1_6:144184667-144184769:+|nuORF	ENST00000367576.5_1_6:144184667-144184769:+|nuORF	ENST00000367576.5_1_6:144184667-144184769:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3532104492188	2	582.354014	1162.69348	0.88325	0.00051437	-1.8039	-0.0010505	-0.92067	-0.00053616	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.77244	1	11184	11184		32.812	1.2826	1	125340000			35261	10556	23353	23362	40227	40227					0.1186360713677459
LTRNFRKTK	9	Unmodified	_LTRNFRKTK_					0	0	0		ENST00000367576.5_1_6:144184667-144184769:+|nuORF	ENST00000367576.5_1_6:144184667-144184769:+|nuORF	ENST00000367576.5_1_6:144184667-144184769:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.353515625	2	582.354014	1162.69348	2.7406	0.001596	-3.1524	-0.0018358	-0.4118	-0.00023981	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.71772	1	12652	12652		39.253	6.4404	1	7862700			35262	10556	23353	23362	40228	40228					0.1186360713677459
LTRNVTVTLKH	11	Unmodified	_LTRNVTVTLKH_					0	0	0		nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2;nc|ENSG00000173698|Q8IZP9-9|ADGRG2;nc|ENSG00000173698|Q8IZP9-7|ADGRG2;nc|ENSG00000173698|Q8IZP9-6|ADGRG2;nc|ENSG00000173698|Q8IZP9-3|ADGRG2;nc|ENSG00000173698|Q8IZP9-4|ADGRG2;nc|ENSG00000173698|Q8IZP9-2|ADGRG2;ENSG00000173698|ENST00000379869|ADGRG2	nc|ENSG00000173698|Q8IZP9-8|ADGRG2	nc|ENSG00000173698|Q8IZP9-8|ADGRG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.3854370117188	2	641.385511	1280.75647	0.94064	0.00060331	-2.5694	-0.001648	-1.6287	-0.0010447	641.3834906355922	102.59	0.76495	102.72	102.3	103.06	0.13293					58	18	4	0	0	0	0.67762	1	10793	10793		35.178	11.656	1	1429800			35263	15104	23354	23363	40229	40229					0.12732128134166487
LTRPRFKY	8	Unmodified	_LTRPRFKY_					0	0	0		nc|ENSG00000082269|Q9P2D6-4|FAM135A;ENSG00000082269|ENST00000418814|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-2|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8173828125	2	540.819276	1079.624	0.098678	5.3367E-05	-1.28	-0.00069225	-1.1813	-0.00063889	540.8184275670533	56.473	0.6984	57.033	56.703	57.401	0.55954					42	15	3	0	0	0	0.884	1	5893	5893		33.516	0.70317	1	1990900			35264	1483	23355	23364	40230	40230					0.08737148188038191
LTRPVEALF	9	Unmodified	_LTRPVEALF_					0	0	0		ENST00000493398.5_1_2:241514948-241516319:+|nuORF;ENSG00000142327|ENST00000270357|RNPEPL1	ENST00000493398.5_1_2:241514948-241516319:+|nuORF	ENST00000493398.5_1_2:241514948-241516319:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3037109375	2	523.305667	1044.59678	-0.61952	-0.0003242	-3.0338	-0.0015876	-3.6533	-0.0019118	523.3039684590141	101.43	1.531	101.43	100.64	102.17	0					81	36	3	0	0	0	0.78058	1	10330	10330		30.504	1.3541	1	761010			35265	4558	23356	23365	40231	40231					0.07626619856978323
LTRQRKVYGD	10	Unmodified	_LTRQRKVYGD_					0	0	0		ENSG00000177409|ENST00000318238|SAMD9L	ENSG00000177409|ENST00000318238|SAMD9L	ENSG00000177409|ENST00000318238|SAMD9L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.3460693359375	2	618.346386	1234.67822	2.5351	0.0015676	-3.3685	-0.0020829	-0.83344	-0.00051535	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.67571	1	10649	10649		45.972	6.7194	1	980120			35266	7138	23357	23366	40232	40232					0.07026695548938733
LTRQRQSSFI	10	Unmodified	_LTRQRQSSFI_					0	0	0			REV__ENST00000400256.4_2_18:319957-320035:-|nuORF	REV__ENST00000400256.4_2_18:319957-320035:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.3460083007812	2	618.346386	1234.67822	0.55169	0.00034113	-1.3321	-0.00082372	-0.78044	-0.00048258	618.3454418699644	97.724	3.0702	97.772	96.827	99.897	0.048157					199	71	4	0	0	0	0.86225	2	10427	10427;10439		32.751	2.4328	1	831610	+		35267	26245	23358	23367	40233;40234	40233					0.0702669554896147
LTRQRVQY	8	Unmodified	_LTRQRVQY_					0	0	0			REV__ENSG00000180251|ENST00000295269|SLC9A4	REV__ENSG00000180251|ENST00000295269|SLC9A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.3070678710938	2	532.30399	1062.59343	1.5626	0.0008318	0.78764	0.00041926	2.3503	0.0012511	532.3041911038255	92.465	0.92314	92.911	92.561	93.484	0.44662					48	21	3	0	0	0	0.89494	1	10976	10976		37.159	0.71236	1	231150	+		35268	22383	23359	23368	40235	40235					0.064633698030093
LTRRPSSP	8	Unmodified	_LTRRPSSP_					0	0	0		ENST00000563052.1_1_16:27720162-27730080:-|nuORF	ENST00000563052.1_1_16:27720162-27730080:-|nuORF	ENST00000563052.1_1_16:27720162-27730080:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2629699707031	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.93786	1	9308	9308		53.351	9.2347	1	4402400			35269	13860	23360	23369	40236	40236					0.05435722848858404
LTRRVVRTY	9	Unmodified	_LTRRVVRTY_					0	0	0			REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3536376953125	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.77696	1	10715	10715		31.53	1.2121	1	61091000	+		35270	18340	23361	23370	40237	40237					0.11863607136797327
LTRRVVRTY	9	Unmodified	_LTRRVVRTY_					0	0	0			REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3534545898438	2	582.354014	1162.69348	-0.84093	-0.00048972	-0.12395	-7.2182E-05	-0.96488	-0.0005619	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.75725	4	11253	11205;11253;11363;11412		36.447	5.9431	1	77752000	+		35271	18340	23361	23370	40238;40239;40240;40241	40239					0.11863607136797327
LTRRVVRTY	9	Unmodified	_LTRRVVRTY_					0	0	0			REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3535766601562	2	582.354014	1162.69348	3.1803	0.0018521	-4.2471	-0.0024733	-1.0667	-0.00062122	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.78124	2	11318	11318;11354		30.318	2.4355	1	77008000	+		35272	18340	23361	23370	40242;40243	40242					0.11863607136797327
LTRRVVRTY	9	Unmodified	_LTRRVVRTY_					0	0	0			REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533325195312	2	582.354014	1162.69348	0.15817	9.2113E-05	-1.1126	-0.00064794	-0.95444	-0.00055582	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.7932	1	11220	11220		25.574	1.0549	1	78004000	+		35273	18340	23361	23370	40244	40244					0.11863607136797327
LTRRVVRTY	9	Unmodified	_LTRRVVRTY_					0	0	0			REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.353271484375	2	582.354014	1162.69348	0.72245	0.00042072	-1.6748	-0.00097534	-0.95238	-0.00055462	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.76764	3	11163	10920;11151;11163		34.173	4.8369	1	132960000	+		35274	18340	23361	23370	40245;40246;40247	40247					0.11863607136797327
LTRRVVRTY	9	Unmodified	_LTRRVVRTY_					0	0	0			REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3534545898438	2	582.354014	1162.69348	0.88325	0.00051437	-1.8039	-0.0010505	-0.92067	-0.00053616	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.77244	3	10894	10894;10990;11088		32.812	3.6424	1	125340000	+		35275	18340	23361	23370	40248;40249;40250	40248					0.11863607136797327
LTRRVVRTY	9	Unmodified	_LTRRVVRTY_					0	0	0			REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	REV__ENST00000477618.1_1_9:74817496-74842957:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3533935546875	2	582.354014	1162.69348	-1.3468	-0.00078429	0.41376	0.00024096	-0.93299	-0.00054333	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.76419	5	10859	10835;10859;10907;10919;11147		35.152	5.746	1	120000000	+		35276	18340	23361	23370	40251;40252;40253;40254;40255	40252					0.11863607136797327
LTRSELMSI	9	Unmodified	_LTRSELMSI_					0	0	0		ENST00000464428.2_1_1:178003890-178007141:-|nuORF	ENST00000464428.2_1_1:178003890-178007141:-|nuORF	ENST00000464428.2_1_1:178003890-178007141:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.286865234375	2	525.286617	1048.55868	0.10549	5.541E-05	-0.039723	-2.0866E-05	0.065763	3.4544E-05	525.2866512649296	54.746	0.41551	54.773	54.543	54.959	0.027138					20	12	2	0	0	0	0.58668	1	4887	4887		47.657	6.2307	1	95570			35277	12090	23362	23371	40256	40256					0.03634365880020596
LTRSELMSI	9	Unmodified	_LTRSELMSI_					0	0	0		ENST00000464428.2_1_1:178003890-178007141:-|nuORF	ENST00000464428.2_1_1:178003890-178007141:-|nuORF	ENST00000464428.2_1_1:178003890-178007141:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	525.286617	1048.55868	0.012653	6.6464E-06	-0.15231	-8.0007E-05	-0.13966	-7.3361E-05	525.2863014692597	54.711	0.66651	54.703	54.455	55.121	-0.0077095	-0.03968	-0.00023394	NaN	47.657	27	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122150			35278	12090	23362	23371							0.03634365880020596
LTRSELMSI	9	Unmodified	_LTRSELMSI_					0	0	0		ENST00000464428.2_1_1:178003890-178007141:-|nuORF	ENST00000464428.2_1_1:178003890-178007141:-|nuORF	ENST00000464428.2_1_1:178003890-178007141:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	525.286617	1048.55868	-0.071523	-3.757E-05	0.56825	0.00029849	0.49673	0.00026092	525.2868805329866	54.778	0.49473	54.752	54.397	54.892	-0.025955	0.0092116	0.00052306	NaN	47.657	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87852			35279	12090	23362	23371							0.03634365880020596
LTRSGLVAASA	11	Unmodified	_LTRSGLVAASA_					0	0	0			REV__ENST00000378246.6_1_10:14996005-14996065:-|nuORF	REV__ENST00000378246.6_1_10:14996005-14996065:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.306396484375	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.66009	1	8332	8332		37.508	3.5865	1	3566700	+		35280	25892	23363	23372	40257	40257					0.07224530363282611
LTRSLAPG	8	Unmodified	_LTRSLAPG_					0	0	0			REV__ENST00000531905.1_1_11:65633394-65633520:+|nuORF	REV__ENST00000531905.1_1_11:65633394-65633520:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	407.7396240234375	2	407.742702	813.470852	0.040004	1.6312E-05	-2.2674	-0.00092452	-2.2274	-0.00090821	407.7417533677004	23.819	0.51098	23.913	23.636	24.147	0.0945					39	22	2	0	0	0	0.884	1	785	785		33.516	1.5607	1	61233	+		35281	21852	23364	23373	40258	40258					0.05665533071578466
LTRTAAPQGT	10	Unmodified	_LTRTAAPQGT_					0	0	0		ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2799072265625	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.86338	3	8473	8473;8600;8745		31.634	3.752	1	1261800			35282	9450	23365	23374	40259;40260;40261	40259					0.03911670812135526
LTRTAAPQGT	10	Unmodified	_LTRTAAPQGT_					0	0	0		ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.27984619140625	2	508.28018	1014.54581	-0.055639	-2.828E-05	0.18106	9.2031E-05	0.12542	6.3751E-05	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.76096	2	9136	9041;9136		41.427	10.672	1	1918800			35283	9450	23365	23374	40262;40263	40263					0.03911670812135526
LTRTAAPQGT	10	Unmodified	_LTRTAAPQGT_					0	0	0		ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2801208496094	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.85981	1	9354	9354		35.152	1.2304	1	1903500			35284	9450	23365	23374	40264	40264					0.03911670812135526
LTRTAAPQGT	10	Unmodified	_LTRTAAPQGT_					0	0	0		ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.279541015625	2	508.28018	1014.54581	-0.39653	-0.00020155	0.29161	0.00014822	-0.10492	-5.3328E-05	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.63899	1	8868	8868		47.96	6.5329	1	2080300			35285	9450	23365	23374	40265	40265					0.03911670812135526
LTRTAAPQGT	10	Unmodified	_LTRTAAPQGT_					0	0	0		ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2798767089844	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.86338	1	8729	8729		31.634	0.10446	1	1814000			35286	9450	23365	23374	40266	40266					0.03911670812135526
LTRTAAPQGT	10	Unmodified	_LTRTAAPQGT_					0	0	0		ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	ENST00000262958.3_1_19:3163029-3163218:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2801818847656	2	508.28018	1014.54581	0.65224	0.00033152	-0.58773	-0.00029873	0.064515	3.2792E-05	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.38353	1	10498	10498		65.465	14.13	1	1819500			35287	9450	23365	23374	40267	40267					0.03911670812135526
LTRTTIKDK	9	Unmodified	_LTRTTIKDK_					0	0	0			REV__chr17:38760608-38764119|62|14.71|0.77|4.26|+|1|PSMB3,PSMB3|1	REV__chr17:38760608-38764119|62|14.71|0.77|4.26|+|1|PSMB3,PSMB3|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3270263671875	2	538.327131	1074.63971	1.246	0.00067074	-0.97003	-0.0005222	0.27594	0.00014854	538.3265007556613	105.75	1.5983	105.78	105.12	106.72	0.038322					102	37	4	0	0	0	0.75725	1	11463	11463		36.447	2.2742	1	831700	+		35288	15651	23366	23375	40268	40268					0.10537389914406958
LTRVILSYK	9	Unmodified	_LTRVILSYK_					0	0	0		ENSG00000001084|ENST00000650454|GCLC	ENSG00000001084|ENST00000650454|GCLC	ENSG00000001084|ENST00000650454|GCLC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8407592773438	2	546.842416	1091.67028	-0.49529	-0.00027085	-3.9856	-0.0021795	-4.4809	-0.0024504	546.8402497724348	101.28	3.7061	101.28	100.69	104.39	0					228	91	5	0	0	0	0.71772	1	10243	10243		39.253	1.4413	1	22090000			35289	648	23367	23376	40269	40269					0.12811168299458586
LTRVVTSLL	9	Unmodified	_LTRVVTSLL_					0	0	0			REV__nc|ENSG00000173926|Q86UD3-2|MARCHF3	REV__nc|ENSG00000173926|Q86UD3-2|MARCHF3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2906494140625	2	501.321317	1000.62808	1.0703	0.00053654	-2.7835	-0.0013954	-1.7132	-0.00085887	501.3208454974661	86.663	0.50413	86.589	86.227	86.731	-0.073997					16	11	2	0	0	0	0.20789	1	8932	8932		24.519	4.5224	1	53257	+		35290	21964	23368	23377	40270	40270					0.1277919289109377
LTRYTFHLI	9	Unmodified	_LTRYTFHLI_					0	0	0			REV__nc|ENSG00000129219|O14939-4|PLD2	REV__nc|ENSG00000129219|O14939-4|PLD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3534545898438	2	582.332216	1162.64988	0.88282	0.00051409	3.5806	0.0020851	4.4634	0.0025992	582.3341206894942	103.15	0.15618	103.27	103.13	103.29	0.12622					6	3	2	0	0	0	0.20789	1	10894	10894		35.618	7.736	1	793630	+		35291	18812	23369	23378	40271	40271					0.07505997639646012
LTSASPRA	8	Unmodified	_LTSASPRA_					0	0	0		ENST00000496336.1_1_7:65540843-65547929:+|nuORF	ENST00000496336.1_1_7:65540843-65547929:+|nuORF	ENST00000496336.1_1_7:65540843-65547929:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.21240234375	2	401.72451	801.434466	2.7157	0.001091	-2.8965	-0.0011636	-0.18082	-7.264E-05	401.72353271467705	30.183	0.87154	30.168	29.601	30.472	-0.015165					30	20	2	0	0	0	0.4196	1	1554	1554		34.173	12.213	1	54090			35292	12782	23370	23379	40272	40272					0.025806561748481727
LTSFYHCRI	9	Unmodified	_LTSFYHCRI_					0	0	0		ENST00000540779.1_1_12:122359430-122370014:+|nuORF;nc|ENSG00000158023|Q8TBY9-3|CFAP251	ENST00000540779.1_1_12:122359430-122370014:+|nuORF	ENST00000540779.1_1_12:122359430-122370014:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.9396362304688	2	570.286951	1138.55935	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.76	1	75.886	75.386	76.386	0.12545								0	0	0	0.31828	1	7060	7060		24.203	0	1				35293	13508	23371	23380	40273	40273					-0.004387946802808074
LTSGSQRSK	9	Unmodified	_LTSGSQRSK_					0	0	0		chr17:7191358-7193483|48|11.38|0.22|5.69|-|2|DLG4,DLG4|1	chr17:7191358-7193483|48|11.38|0.22|5.69|-|2|DLG4,DLG4|1	chr17:7191358-7193483|48|11.38|0.22|5.69|-|2|DLG4,DLG4|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.2834777832031	2	482.26453	962.514508	0.16995	8.1961E-05	4.1695	0.0020108	4.3395	0.0020928	482.2664604606941	49.663	0.7422	50.508	50.272	51.014	0.84501					30	17	2	0	0	0	0.20789	1	4901	4901		34.173	12.213	1	622830			35294	240	23372	23381	40274	40274					0.03175097778046165
LTSKPKYIKIY	11	Unmodified	_LTSKPKYIKIY_					0	0	0			REV__ENST00000606893.5_1_6:110540570-110540624:+|nuORF	REV__ENST00000606893.5_1_6:110540570-110540624:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.94366455078125	3	451.942868	1352.80677	-0.53385	-0.00024127	1.0912	0.00049318	0.55739	0.00025191	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.77803	1	4401	4401		15.921	0	1	920720	+		35295	29377	23373	23382	40275	40275					0.14448237739316028
LTSLDWETPS	10	Unmodified	_LTSLDWETPS_					0	0	0		nc|ENSG00000130803|Q96PQ6-3|ZNF317;nc|ENSG00000130803|Q96PQ6-2|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.29541015625	2	574.777136	1147.53972	0.29308	0.00016845	3.6728	0.0021111	3.9659	0.0022795	575.2805363673668	37.458	1.5186	37.944	37.038	38.556	0.48581					71	37	3	0	0	0	0.37624	1	2945	2945		34.173	0	1	237530			35296	14909	23374	23383	40276	40276					-0.02814892210039943
LTSLIKAGLTF	11	Unmodified	_LTSLIKAGLTF_					0	0	0		nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;nc|ENSG00000061987|Q7Z3U7-5|MON2;ENSG00000061987|ENST00000393630|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3511352539062	2	582.355357	1162.69616	0.75692	0.00044079	-3.4476	-0.0020077	-2.6906	-0.0015669	582.3532376593708	103.08	2.584	103.3	103	105.58	0.22556					189	68	3	0	0	0	0.72106	1	12825	12825		28.081	2.5074	1	7736200			35297	1080	23375	23384	40277	40277					0.1213201775105972
LTSLLPRVF	9	Unmodified	_LTSLLPRVF_					0	0	0		ENST00000430246.6_1_14:21731627-21731699:-|nuORF	ENST00000430246.6_1_14:21731627-21731699:-|nuORF	ENST00000430246.6_1_14:21731627-21731699:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3034057617188	2	523.32386	1044.63317	-1.0986	-0.00057494	-2.8312	-0.0014816	-3.9298	-0.0020566	523.3220577434397	88.624	0.31943	89.095	88.994	89.314	0.47068					10	7	2	0	0	0	0.20789	1	10486	10486		20.947	0	1	107310			35298	11629	23376	23385	40278	40278					0.1126349675369056
LTSLVLVAS	9	Unmodified	_LTSLVLVAS_					0	0	0		ENST00000563441.5_1_15:75651254-75660924:-|nuORF;nc|ENSG00000140400|Q9NTJ4-3|MAN2C1;nc|ENSG00000140400|Q9NTJ4-2|MAN2C1;ENSG00000140400|ENST00000267978|MAN2C1;nc|ENSG00000140400|Q9NTJ4-4|MAN2C1;ENST00000564785.5_1_15:75651254-75651557:-|nuORF;ENST00000563368.5_1_15:75650962-75652298:-|nuORF	ENST00000563441.5_1_15:75651254-75660924:-|nuORF	ENST00000563441.5_1_15:75651254-75660924:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7800598144531	2	451.781493	901.548434	1.0261	0.00046357	-4.2891	-0.0019377	-3.263	-0.0014742	451.779676395938	86.614	1.2405	86.669	86.189	87.43	0.055641					81	28	4	0	0	0	0.74721	1	8799	8799		37.159	1.9584	1	295460			35299	4431	23377	23386	40279	40279					0.09372126217078858
LTSLVLVAS	9	Unmodified	_LTSLVLVAS_					0	0	0		ENST00000563441.5_1_15:75651254-75660924:-|nuORF;nc|ENSG00000140400|Q9NTJ4-3|MAN2C1;nc|ENSG00000140400|Q9NTJ4-2|MAN2C1;ENSG00000140400|ENST00000267978|MAN2C1;nc|ENSG00000140400|Q9NTJ4-4|MAN2C1;ENST00000564785.5_1_15:75651254-75651557:-|nuORF;ENST00000563368.5_1_15:75650962-75652298:-|nuORF	ENST00000563441.5_1_15:75651254-75660924:-|nuORF	ENST00000563441.5_1_15:75651254-75660924:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.7803649902344	2	451.781493	901.548434	0.62853	0.00028396	-3.3335	-0.001506	-2.705	-0.0012221	451.77981723466957	86.544	1.1511	86.693	86.36	87.511	0.14902					59	26	3	0	0	0	0.78536	1	8526	8526		29.15	0.89528	1	150120			35300	4431	23377	23386	40280	40280					0.09372126217078858
LTSNEEPDL	9	Unmodified	_LTSNEEPDL_					0	0	0			REV__ENST00000486013.5_1_7:132937857-133314895:+|nuORF	REV__ENST00000486013.5_1_7:132937857-133314895:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2669677734375	2	509.240386	1016.46622	0.35208	0.00017929	-2.867	-0.00146	-2.5149	-0.0012807	509.23890387219666	55.415	0.58342	55.816	55.614	56.197	0.40101					19	13	2	0	0	0	0.20789	1	5735	5735		32.812	10.853	1	284300	+		35301	18957	23378	23387	40281	40281					-0.041354406525101695
LTSNEEPDL	9	Unmodified	_LTSNEEPDL_					0	0	0			REV__ENST00000486013.5_1_7:132937857-133314895:+|nuORF	REV__ENST00000486013.5_1_7:132937857-133314895:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	509.240386	1016.46622	0.81309	0.00041406	-3.1469	-0.0016025	-2.3338	-0.0011885	509.23864462728886	55.26	0.62669	55.829	55.489	56.116	0.56836	0.0064965	-9.6829E-05	NaN	37.812	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	234400	+		35302	18957	23378	23387							-0.041354406525101695
LTSNEKLM	8	Unmodified	_LTSNEKLM_					0	0	0		ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889791-118894106:+|nuORF;ENSG00000196655|ENST00000533632|TRAPPC4	ENST00000447216.2_1_11:118889505-118891019:+|nuORF	ENST00000447216.2_1_11:118889505-118891019:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2439270019531	2	468.24696	934.479368	-0.58318	-0.00027307	-2.918	-0.0013663	-3.5011	-0.0016394	468.24540363646156	47.508	2.0762	47.505	46.933	49.01	-0.002449					126	59	4	0	0	0	0.88944	1	3942	3942		57.811	4.4598	1	1948700			35303	8087	23379	23388	40282	40282					0.009507189258897597
LTSPLPLK	8	Unmodified	_LTSPLPLK_					0	0	0			REV__ENSG00000172476|ENST00000304236|RAB40A	REV__ENSG00000172476|ENST00000304236|RAB40A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7794494628906	2	434.778754	867.542954	-1.8344	-0.00079754	4.3253	0.0018805	2.4909	0.001083	434.7805085345101	43.07	1.706	43.07	42.535	44.241	0					126	41	4	0	0	0	0.87479	1	3083	3083		30.504	0.6621	1	2514600	+		35304	21835	23380	23389	40283	40283					0.10388447425282266
LTSPLPLK	8	Unmodified	_LTSPLPLK_					0	0	0			REV__ENSG00000172476|ENST00000304236|RAB40A	REV__ENSG00000172476|ENST00000304236|RAB40A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7789306640625	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.89043	1	2616	2616		35.618	2.1027	1	2513700	+		35305	21835	23380	23389	40284	40284					0.10388447425282266
LTSPLTEP	8	Unmodified	_LTSPLTEP_					0	0	0		ENST00000453768.6_1_11:67208484-67210099:-|nuORF;ENSG00000172725|ENST00000341356|CORO1B	ENST00000453768.6_1_11:67208484-67210099:-|nuORF	ENST00000453768.6_1_11:67208484-67210099:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	429.2356872558594	2	429.234376	856.454199	-0.17888	-7.6781E-05	3.2868	0.0014108	3.1079	0.001334	429.2356452046458	63.375	2.3242	63.37	62.729	65.053	-0.0055504					274	88	5	0	0	0	0.884	1	5875	5875		33.516	1.5607	1	5346500			35306	6786	23381	23390	40285	40285					0.020229873949460853
LTSPLTEP	8	Unmodified	_LTSPLTEP_					0	0	0		ENST00000453768.6_1_11:67208484-67210099:-|nuORF;ENSG00000172725|ENST00000341356|CORO1B	ENST00000453768.6_1_11:67208484-67210099:-|nuORF	ENST00000453768.6_1_11:67208484-67210099:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.23590087890625	2	429.234376	856.454199	0.39502	0.00016955	2.7535	0.0011819	3.1485	0.0013514	429.2354268655387	63.129	2.3304	63.252	62.677	65.007	0.12252					259	94	5	0	0	0	0.89962	1	5520	5520		38.806	5.2906	1	5976700			35307	6786	23381	23390	40286	40286					0.020229873949460853
LTSPLTEP	8	Unmodified	_LTSPLTEP_					0	0	0		ENST00000453768.6_1_11:67208484-67210099:-|nuORF;ENSG00000172725|ENST00000341356|CORO1B	ENST00000453768.6_1_11:67208484-67210099:-|nuORF	ENST00000453768.6_1_11:67208484-67210099:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.23577880859375	2	429.234376	856.454199	-0.96904	-0.00041595	4.1028	0.001761	3.1337	0.0013451	429.23600225893705	63.259	2.2189	63.282	62.72	64.938	0.022984					256	90	4	0	0	0	0.90465	1	5516	5516		40.573	7.057	1	5703300			35308	6786	23381	23390	40287	40287					0.020229873949460853
LTSSKGQLQK	10	Unmodified	_LTSSKGQLQK_					0	0	0		ENSG00000147872|ENST00000276914|PLIN2;ENST00000464326.1_1_9:19108613-19116611:-|nuORF	ENSG00000147872|ENST00000276914|PLIN2	ENSG00000147872|ENST00000276914|PLIN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3161010742188	2	545.316763	1088.61897	0.87477	0.00047703	-1.0194	-0.00055589	-0.14462	-7.8862E-05	545.3159995192688	33.836	0.45341	34.141	33.912	34.366	0.30495					23	10	3	0	0	0	0.54701	1	2489	2489		52.937	5.2794	1	302400			35309	4925	23382	23391	40288	40288					0.07820799534761136
LTSSRAVGH	9	Unmodified	_LTSSRAVGH_					0	0	0			REV__nc|ENSG00000084676|Q15788-2|NCOA1	REV__nc|ENSG00000084676|Q15788-2|NCOA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.25433349609375	2	464.253966	926.493378	-0.76573	-0.00035549	0.99904	0.00046381	0.2333	0.00010831	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.76764	1	9869	9869		34.173	0.65696	1	1046600	+		35310	16878	23383	23392	40289	40289					0.027191324691898444
LTSTKTPKP	9	Unmodified	_LTSTKTPKP_					0	0	0		ENSG00000060749|ENST00000650167|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1	ENSG00000060749|ENST00000650167|QSER1	ENSG00000060749|ENST00000650167|QSER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.7903137207031	2	486.78985	971.565146	0.5341	0.00025999	-0.50217	-0.00024445	0.03193	1.5543E-05	486.78936329822994	33.687	0.96471	33.857	33.314	34.278	0.16971					48	22	3	0	0	0	0.64555	1	2429	2429		44.377	1.5129	1	621090			35311	1069	23384	23393	40290	40290					0.078226271030303
LTTALSHA	8	Unmodified	_LTTALSHA_					0	0	0			REV__ENSG00000188822|ENST00000374472|CNR2	REV__ENSG00000188822|ENST00000374472|CNR2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.25640869140625	2	407.226885	812.439217	-1.3575	-0.00055279	0.21579	8.7875E-05	-1.1417	-0.00046492	407.2268570338695	40.248	0.5829	40.205	39.922	40.505	-0.043694					16	13	2	0	0	0	0.4196	1	2950	2950		33.516	0	1	75521	+		35312	23034	23385	23394	40291	40291					0.025495403176137188
LTTGVGLVL	9	Unmodified	_LTTGVGLVL_					0	0	0		ENST00000575282.5_1_17:78185753-78186503:-|nuORF	ENST00000575282.5_1_17:78185753-78186503:-|nuORF	ENST00000575282.5_1_17:78185753-78186503:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.77294921875	2	436.776211	871.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.202	1	27.202	26.702	27.702	0								0	0	0	0.33676	1	1076	1076		18.324	0	1				35313	14045	23386	23395	40292	40292					0.09696143562666748
LTTKNLFLI	9	Unmodified	_LTTKNLFLI_					0	0	0		nc|ENSG00000120526|Q96RS6-3|NUDCD1;ENST00000519607.5_1_8:110255240-110326067:-|nuORF;nc|ENSG00000120526|Q96RS6-2|NUDCD1;ENSG00000120526|ENST00000239690|NUDCD1	nc|ENSG00000120526|Q96RS6-3|NUDCD1	nc|ENSG00000120526|Q96RS6-3|NUDCD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.285888671875	2	531.831517	1061.64848	0.73767	0.00039232	-0.97657	-0.00051937	-0.2389	-0.00012706	531.8310858933096	55.048	0.41751	55.449	55.238	55.656	0.40101					14	9	2	0	0	0	0.20789	1	5651	5651		16.473	1.6083	1	104890			35314	3135	23387	23396	40293	40293					0.12012363550911687
LTTLGKDH	8	Unmodified	_LTTLGKDH_					0	0	0		ENST00000519256.5_1_5:170585477-170669877:+|nuORF	ENST00000519256.5_1_5:170585477-170669877:+|nuORF	ENST00000519256.5_1_5:170585477-170669877:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.74468994140625	2	442.745442	883.476331	0.78435	0.00034727	-2.1089	-0.00093371	-1.3246	-0.00058645	442.7444248853172	92.688	1.1771	93.135	92.689	93.866	0.44661					49	27	2	0	0	0	0.92457	1	11012	11012		47.916	0	1	319190			35315	13132	23388	23397	40294	40294					0.029932118633723803
LTTPVLEVLAR	11	Unmodified	_LTTPVLEVLAR_					0	0	0		L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|45|1|sense	L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|45|1|sense	L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|45|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.3674926757812	2	606.371538	1210.72852	-1.2685	-0.00076921	-2.0387	-0.0012362	-3.3072	-0.0020054	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.70737	1	9529	9529		30.318	3.2704	1	823240			35316	14666	23389	23398	40295	40295					0.13158805154080255
LTTREELY	8	Unmodified	_LTTREELY_					0	0	0		ENSG00000141748|ENST00000269586|ARL5C	ENSG00000141748|ENST00000269586|ARL5C	ENSG00000141748|ENST00000269586|ARL5C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.7694091796875	2	512.769114	1023.52368	0.15603	8.0008E-05	-0.2552	-0.00013086	-0.099166	-5.0849E-05	512.7688154099643	38.505	0.9453	38.477	38.129	39.074	-0.027843					50	21	3	0	0	0	0.87259	1	2588	2588		58.782	4.0056	1	477320			35317	4528	23390	23399	40296	40296					0.012854463437065533
LTTRLRGLGRL	11	Unmodified	_LTTRLRGLGRL_					0	0	0			REV__ENST00000446986.1_1_X:118601448-118602151:-|nuORF	REV__ENST00000446986.1_1_X:118601448-118602151:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.2723388671875	3	419.270089	1254.78844	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.502	1	48.502	48.002	49.002	0								0	0	0	0.56276	1	3768	3768		23.378	2.3457	1		+		35318	26814	23391	23400	40297	40297					0.17123540608008625
LTTTIVTGPMV	11	Unmodified	_LTTTIVTGPMV_					0	0	0			REV__nc|ENSG00000217128|Q8TF40-3|FNIP1	REV__nc|ENSG00000217128|Q8TF40-3|FNIP1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	566.817138671875	2	566.81775	1131.62095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.59	1	114.65	114.15	115.15	0.061073								0	0	0	0.56276	1	12249	12249		25.574	2.5316	1		+		35319	23697	23392	23401	40298	40298					0.06040092228363392
LTTTTTLR	8	Unmodified	_LTTTTTLR_					0	0	0			REV__nc|ENSG00000179348|P23769-2|GATA2	REV__nc|ENSG00000179348|P23769-2|GATA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.7659606933594	2	453.766374	905.518196	0.21911	9.9423E-05	-1.7347	-0.00078715	-1.5156	-0.00068773	453.7653867501488	40.992	0.89008	41.065	40.735	41.626	0.073414					74	28	3	0	0	0	0.85277	1	2707	2707		25.45	0	1	782930	+		35320	30066	23393	23402	40299	40299					0.061657675519199984
LTVAPDHFLI	10	Unmodified	_LTVAPDHFLI_					0	0	0			REV__ENSG00000112299|ENST00000367928|VNN1	REV__ENSG00000112299|ENST00000367928|VNN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.816650390625	2	563.318774	1124.623	-1.2505	-0.00070442	-2.2075	-0.0012435	-3.458	-0.0019479	563.8178015744215	55.91	0.93718	55.9	55.247	56.184	-0.010136					34	25	2	0	0	0	0.37624	1	4965	4965		34.173	1.3601	1	136080	+		35321	17939	23394	23403	40300	40300					0.06566889028476908
LTVAPLLL	8	Unmodified	_LTVAPLLL_					0	0	0			REV__ENST00000540732.3_1_19:41930587-41930716:+|nuORF	REV__ENST00000540732.3_1_19:41930587-41930716:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1918029785156	2	420.283672	838.552791	0.28244	0.00011871	0.055915	2.35E-05	0.33836	0.00014221	420.28353221900875	94.721	0.45969	95.141	94.933	95.393	0.41964					14	10	2	0	0	0	0.4196	1	11342	11342		26.796	6.3143	1	81173	+		35322	28469	23395	23404	40301	40301					0.12705635430654638
LTVDCLID	8	Carbamidomethyl (C)	_LTVDC(Carbamidomethyl (C))LID_	LTVDC(1)LID		LTVDC(41)LID		0	1	0			REV__ENSG00000112182|ENST00000257749|BACH2	REV__ENSG00000112182|ENST00000257749|BACH2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.7385559082031	2	474.738968	947.463383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.022	1	35.028	34.528	35.528	0.0063934								0	0	0	0.30045	1	2175	2175		40.573	7.057	1		+		35323	17923	23396	23405	40302	40302	235				-0.012449873110313092
LTVEILGVL	9	Unmodified	_LTVEILGVL_					0	0	0			REV__ENSG00000170426|ENST00000293502|SDR9C7	REV__ENSG00000170426|ENST00000293502|SDR9C7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8051452636719	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.7932	1	2629	2629		23.042	1.0826	1	336090	+		35324	21660	23397	23406	40303	40303					0.11580985768239316
LTVIVTPVS	9	Unmodified	_LTVIVTPVS_					0	0	0		nc|ENSG00000289720|Q96J02|ITCH;ENSG00000078747|ENST00000374864|ITCH	nc|ENSG00000289720|Q96J02|ITCH	nc|ENSG00000289720|Q96J02|ITCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.79083251953125	2	464.789318	927.564084	-0.5794	-0.0002693	3.5758	0.001662	2.9964	0.0013927	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.72402	1	2248	2248		38.806	6.8513	1	409180			35325	1406	23398	23407	40304	40304					0.09740412734129222
LTVKTNIFVFK	11	Unmodified	_LTVKTNIFVFK_					0	0	0		nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;ENSG00000158987|ENST00000509018|RAPGEF6;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;ENST00000514179.5_1_5:130808426-130834192:-|nuORF;nc|ENSG00000158987|Q8TEU7-6|RAPGEF6;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6	nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6	nc|ENSG00000158987|Q8TEU7-5|RAPGEF6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2680358886719	3	437.267463	1308.78056	-0.040503	-1.7711E-05	0.93992	0.000411	0.89941	0.00039328	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.75121	1	4331	4331		21.78	0	1	2735300			35326	5506;15030	23399	23408	40305	40305					0.13851968567837503
LTVKVGEPK	9	Unmodified	_LTVKVGEPK_					0	0	0		ENSG00000095380|ENST00000210444|NANS	ENSG00000095380|ENST00000210444|NANS	ENSG00000095380|ENST00000210444|NANS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2853088378906	2	485.800217	969.585882	-1.0038	-0.00048766	1.2043	0.00058504	0.20047	9.7386E-05	485.80062477408416	46.451	0.61878	47.374	46.988	47.607	0.92315					23	14	2	0	0	0	0.20789	1	4377	4377		40.058	2.8991	1	1898200			35327	1724	23400	23409	40306	40306					0.09987217482716915
LTVLAPLGDSM	11	Unmodified	_LTVLAPLGDSM_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8037109375	2	558.8021	1115.58965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.11	1	31.099	30.599	31.599	-0.010656								0	0	0	0.56276	1	1677	1677		31.53	5.9558	1		+		35328	19496	23401	23410	40307	40307					0.03647519194259985
LTVLGLEP	8	Unmodified	_LTVLGLEP_					0	0	0		ENSG00000089692|ENST00000203629|LAG3;nc|ENSG00000089692|P18627-2|LAG3;ENST00000538079.1_1_12:6882155-6887174:+|nuORF	ENSG00000089692|ENST00000203629|LAG3	ENSG00000089692|ENST00000203629|LAG3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2666931152344	2	421.255111	840.49567	-0.30728	-0.00012944	3.3672	0.0014185	3.0599	0.001289	421.25637899987504	28.511	0.19705	28.414	28.261	28.458	-0.096945					7	4	2	0	0	0	0.4196	1	1717	1717		31.955	0	1	28302			35329	1630	23402	23411	40308	40308					0.06904168154289891
LTVLGLEP	8	Unmodified	_LTVLGLEP_					0	0	0		ENSG00000089692|ENST00000203629|LAG3;nc|ENSG00000089692|P18627-2|LAG3;ENST00000538079.1_1_12:6882155-6887174:+|nuORF	ENSG00000089692|ENST00000203629|LAG3	ENSG00000089692|ENST00000203629|LAG3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	421.255111	840.49567	-1.8744	-0.00078959	7.6276	0.0032132	5.7533	0.0024236	421.26142236607603	28.509	0.12188	28.578	28.477	28.599	0.068678	0.082054	0.00022915	NaN	31.955	9	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23799			35330	1630	23402	23411							0.06904168154289891
LTVLVIICY	9	Unmodified	_LTVLVIICY_					0	0	0		nc|ENSG00000175785|Q86XR5-2|PRIMA1;ENSG00000175785|ENST00000393140|PRIMA1	nc|ENSG00000175785|Q86XR5-2|PRIMA1	nc|ENSG00000175785|Q86XR5-2|PRIMA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	519.1388549804688	2	518.809196	1035.60384	-0.22367	-0.00011604	2.463	0.0012778	2.2393	0.0011618	518.8103495511101	98.404	1.6814	98.632	97.611	99.292	0.22787					74	38	3	0	0	0	0.20789	1	10188	10188		18.324	3.6603	1	1004100			35331	7034	23403	23412	40309	40309					0.08746216413192087
LTVLYGGLLEH	11	Unmodified	_LTVLYGGLLEH_					0	0	0		ENSG00000186166|ENST00000334418|CENATAC;ENST00000534656.2_1_11:118868886-118869820:+|nuORF;ENST00000524670.5_1_11:118869052-118882689:+|nuORF	ENSG00000186166|ENST00000334418|CENATAC	ENSG00000186166|ENST00000334418|CENATAC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5640563964844	3	405.564168	1213.67067	-0.18889	-7.6609E-05	0.90722	0.00036794	0.71833	0.00029133	405.56454193818195	61.137	0.35434	61.124	60.82	61.174	-0.012199					23	15	2	0	0	0	0.7342	1	5680	5680		28.577	0.93281	1	157390			35332	7778	23404	23413	40310	40310					0.0723854322866373
LTVSNMSPE	9	Unmodified	_LTVSNMSPE_					0	0	0		nc|ENSG00000232869|A0A5B7|TRBV29-1	nc|ENSG00000232869|A0A5B7|TRBV29-1	nc|ENSG00000232869|A0A5B7|TRBV29-1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.237060546875	2	489.23405	976.453547	0.45266	0.00022146	4.3737	0.0021398	4.8263	0.0023612	489.23621768021786	62.918	2.6052	63.04	62.714	65.319	0.12252					281	107	5	0	0	0	0.77696	1	5643	5643		31.53	3.6476	1	3811100			35333	15272	23405	23414	40311	40311					-0.03562175316403682
LTVTFLGG	8	Unmodified	_LTVTFLGG_					0	0	0			REV__nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	REV__nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.2327880859375	2	404.234179	806.453805	-1.8204	-0.00073588	-0.96943	-0.00039188	-2.7898	-0.0011278	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.86288	1	8285	8285		26.796	0	1	4754100	+		35334	19851	23406	23415	40312	40312					0.04283612465758324
LTVTFLGG	8	Unmodified	_LTVTFLGG_					0	0	0			REV__nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	REV__nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.23236083984375	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.884	3	8232	8232;8276;8300		35.201	2.3883	1	4227600	+		35335	19851	23406	23415	40313;40314;40315	40313					0.04283612465758324
LTVTFLGG	8	Unmodified	_LTVTFLGG_					0	0	0			REV__nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	REV__nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2327880859375	2	404.234179	806.453805	-1.8251	-0.00073778	-1.1309	-0.00045714	-2.956	-0.0011949	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.86288	1	8218	8218		26.796	1.3459	1	3315300	+		35336	19851	23406	23415	40316	40316					0.04283612465758324
LTVTQDPKL	9	Unmodified	_LTVTQDPKL_					0	0	0			REV__ENST00000242059.9_1_7:29963390-29963471:-|nuORF	REV__ENST00000242059.9_1_7:29963390-29963471:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2957458496094	2	507.795132	1013.57571	-0.85867	-0.00043603	0.28848	0.00014649	-0.57019	-0.00028954	507.7951384081689	60.196	0.84625	60.587	60.294	61.14	0.39077					41	23	2	0	0	0	0.23176	1	6393	6393		70.816	1.1886	1	776630	+		35337	24231	23407	23416	40317	40317					0.06946609757460465
LTWKPPEP	8	Unmodified	_LTWKPPEP_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.2784118652344	2	484.26601	966.517468	-0.74105	-0.00035886	1.4439	0.00069924	0.70287	0.00034038	484.26650733847674	95.122	1.0279	95.353	94.9	95.928	0.23103					36	24	2	0	0	0	0.4196	1	9824	9824		12.207	5.0135	1	92727			35338	3299	23408	23417	40318	40318					0.03286972902844809
LTWKPPEP	8	Unmodified	_LTWKPPEP_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	484.26601	966.517468	-0.9097	-0.00044054	2.63	0.0012736	1.7203	0.00083309	484.2671134997109	95.652	0.6021	95.652	95.314	95.916	0	0.27881	0.0015443	NaN	12.207	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49285			35339	3299	23408	23417							0.03286972902844809
LTWKPPEP	8	Unmodified	_LTWKPPEP_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	484.26601	966.517468	-0.090214	-4.3688E-05	0.9253	0.00044809	0.83508	0.0004044	484.26629486681156	95.406	0.78503	95.472	95.095	95.88	0.065918	0.098734	-0.00010676	NaN	12.207	30	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99521			35340	3299	23408	23417							0.03286972902844809
LTWKPPEP	8	Unmodified	_LTWKPPEP_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	484.26601	966.517468	2.0312	0.00098362	-1.142	-0.00055303	0.88917	0.0004306	484.2650888164686	95.313	0.91283	95.255	94.85	95.763	-0.057526	-0.11776	-0.002109	NaN	12.207	37	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101070			35341	3299	23408	23417							0.03286972902844809
LTWKPPEP	8	Unmodified	_LTWKPPEP_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	484.26601	966.517468	0.73685	0.00035683	-0.019642	-9.5119E-06	0.7172	0.00034732	484.26582309012355	95.126	0.94054	95.289	94.908	95.848	0.16307	-0.08416	-0.001022	NaN	12.207	36	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101700			35342	3299	23408	23417							0.03286972902844809
LTWPAEPQ	8	Unmodified	_LTWPAEPQ_					0	0	0			REV__ENSG00000180900|ENST00000356994|SCRIB	REV__ENSG00000180900|ENST00000356994|SCRIB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2560119628906	2	471.239993	940.465432	-0.33582	-0.00015825	-0.956	-0.00045051	-1.2918	-0.00060876	471.24057780425505	29.882	0.47279	29.792	29.619	30.092	-0.089546					16	10	2	0	0	0	0.4196	1	1957	1957		42.396	5.237	1	58639	+		35343	22423	23409	23418	40319	40319					-0.007181905109177933
LTWRAPRLRP	10	Unmodified	_LTWRAPRLRP_					0	0	0			REV__chr1:143382868-144245686|29|146.69|0.66|7.8|-|1|TE_info:MLT1H1,MLT1H1_dup139,ERVL-MaLR,LTR,acceptor,-,143382506,143382868|None,LINC02802|1	REV__chr1:143382868-144245686|29|146.69|0.66|7.8|-|1|TE_info:MLT1H1,MLT1H1_dup139,ERVL-MaLR,LTR,acceptor,-,143382506,143382868|None,LINC02802|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.8881225585938	2	633.383106	1264.75166	-0.69443	-0.00043984	3.7757	0.0023914	3.0812	0.0019516	633.3853702826096	49.428	1.4565	49.404	48.663	50.119	-0.024029					54	32	2	0	0	0	0.86802	1	4282	4282		10.265	0	1	117520	+		35344	15410	23410	23419	40320	40320					0.12987288782073847
LTWRRDLRRLH	11	Unmodified	_LTWRRDLRRLH_					0	0	0			REV__ENSG00000107957|ENST00000369774|SH3PXD2A	REV__ENSG00000107957|ENST00000369774|SH3PXD2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	507.9694519042969	3	507.967292	1520.88005	0.089225	4.5324E-05	4.1812	0.0021239	4.2705	0.0021693	507.9694384392266	16.543	0.50421	16.603	16.486	16.99	0.059269					58	21	4	0	0	0	0.75779	1	163	163		20.315	10.211	1	1595100	+		35345	17685	23411	23420	40321	40321					0.1404422402513319
LTWTNTTPEY	10	Unmodified	_LTWTNTTPEY_					0	0	0			REV__ENST00000471654.1_1_2:23914526-23929531:+|nuORF	REV__ENST00000471654.1_1_2:23914526-23929531:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	613.2910766601562	2	613.290411	1224.56627	-0.38521	-0.00023625	0.83707	0.00051337	0.45186	0.00027712	613.290841465229	62.778	1.1508	62.772	62.454	63.605	-0.0055504					134	54	4	0	0	0	0.38353	1	5835	5835		65.465	1.2581	1	912360	+		35346	18376	23412	23421	40322	40322					-0.03703203318718806
LTYFLIDD	8	Unmodified	_LTYFLIDD_					0	0	0			REV__nc|ENSG00000099834|Q9HBB8-2|CDHR5	REV__nc|ENSG00000099834|Q9HBB8-2|CDHR5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7749938964844	2	500.255308	998.496064	0.65863	0.00032948	2.7689	0.0013851	3.4275	0.0017146	500.25628988278055	49.266	0.73101	50.17	49.765	50.496	0.90424					37	17	3	0	0	0	0.4196	1	4795	4795		26.796	0	1	769990	+		35347	17109	23413	23422	40323	40323					-0.003244569165303801
LTYFTEKRL	9	Unmodified	_LTYFTEKRL_					0	0	0			REV__ENSG00000070019|ENST00000261170|GUCY2C	REV__ENSG00000070019|ENST00000261170|GUCY2C	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	586.8067016601562	2	585.829506	1169.64446	-0.76407	-0.00044761	1.3699	0.00080252	0.60581	0.0003549	585.8302814787561	59.398	0.86243	59.384	58.927	59.789	-0.013729					41	23	2	0	0	0	0.20789	1	5471	5471		15.642	6.9481	1	72692	+		35348	16593	23414	23423	40324	40324					0.06642274057185205
LTYGKESVGQ	10	Unmodified	_LTYGKESVGQ_					0	0	0			REV__ENST00000393203.2_1_1:117530796-117530847:+|nuORF	REV__ENST00000393203.2_1_1:117530796-117530847:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.2827758789062	2	541.279846	1080.54514	0.87051	0.00047119	-0.44403	-0.00024034	0.42649	0.00023085	541.2795073058332	25.666	0.42307	25.633	25.419	25.842	-0.032125					17	11	2	0	0	0	0.86106	1	1046	1046		33.922	1.1092	1	33125	+		35349	26049	23415	23424	40325	40325					0.008088313724329055
LVAAAGPIL	9	Unmodified	_LVAAAGPIL_					0	0	0		ENST00000301923.13_2_22:40719039-40719303:+|nuORF	ENST00000301923.13_2_22:40719039-40719303:+|nuORF	ENST00000301923.13_2_22:40719039-40719303:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7670593261719	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.7932	1	2211	2211		21.702	0	1	1649400			35350	9812	23416	23425	40326	40326					0.09792178253815109
LVAAAGPIL	9	Unmodified	_LVAAAGPIL_					0	0	0		ENST00000301923.13_2_22:40719039-40719303:+|nuORF	ENST00000301923.13_2_22:40719039-40719303:+|nuORF	ENST00000301923.13_2_22:40719039-40719303:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7666931152344	2	412.765646	823.516739	0.2674	0.00011037	3.4179	0.0014108	3.6853	0.0015212	412.76694459903433	48.848	3.1893	48.886	47.742	50.932	0.037731					149	88	4	0	0	0	0.72098	1	3709	3709		39.021	17.319	1	734040			35351	9812	23416	23425	40327	40327					0.09792178253815109
LVAAALSAP	9	Unmodified	_LVAAALSAP_					0	0	0			REV__ENSG00000179930|ENST00000339948|ZNF648	REV__ENSG00000179930|ENST00000339948|ZNF648	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2574768066406	2	406.747453	811.480354	1.9826	0.00080642	2.1456	0.00087271	4.1282	0.0016791	406.74827491564287	54.914	0.93124	54.941	54.794	55.725	0.027138					35	23	2	0	0	0	0.20789	1	4941	4941		12.959	0.75233	1	96550	+		35352	22368	23417	23426	40328	40328					0.06707301357073447
LVAAEVSEF	9	Unmodified	_LVAAEVSEF_					0	0	0			REV__ENSG00000183751|ENST00000568546|TBL3	REV__ENSG00000183751|ENST00000568546|TBL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.75262451171875	2	482.752933	963.491313	-0.53192	-0.00025679	0.87246	0.00042118	0.34054	0.0001644	482.7532217618567	76.334	0.68707	76.902	76.474	77.162	0.56836					41	18	3	0	0	0	0.58151	1	8708	8708		47.916	1.9636	1	757670	+		35353	22623	23418	23427	40329	40329					0.008106589407248066
LVAAIPHTPL	10	Unmodified	_LVAAIPHTPL_					0	0	0			REV__ENST00000552231.5_1_12:70637079-70637184:+|nuORF	REV__ENST00000552231.5_1_12:70637079-70637184:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3167724609375	2	516.316035	1030.61752	0.04847	2.5026E-05	0.2935	0.00015154	0.34197	0.00017657	516.3158625296053	62.259	1.1248	62.813	62.214	63.339	0.55449					57	25	3	0	0	0	0.81018	1	6688	6688		38.806	3.6541	1	588050	+		35354	28619	23419	23428	40330	40330					0.10343210236646883
LVAAIPIAT	9	Unmodified	_LVAAIPIAT_					0	0	0			REV__ENSG00000006071|ENST00000389817|ABCC8	REV__ENSG00000006071|ENST00000389817|ABCC8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.77935791015625	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.78851	1	2732	2732		28.254	1.4582	1	2581600	+		35355	16095	23420	23429	40331	40331					0.10388447425293634
LVAAIPIAT	9	Unmodified	_LVAAIPIAT_					0	0	0			REV__ENSG00000006071|ENST00000389817|ABCC8	REV__ENSG00000006071|ENST00000389817|ABCC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7794189453125	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.76996	1	2680	2680		33.516	0	1	2524800	+		35356	16095	23420	23429	40332	40332					0.10388447425293634
LVAALISLNGG	11	Unmodified	_LVAALISLNGG_					0	0	0			REV__ENSG00000221882|ENST00000573901|OR3A2	REV__ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.3109130859375	2	514.310949	1026.60735	-0.40773	-0.0002097	-0.086767	-4.4625E-05	-0.4945	-0.00025432	514.3107991559394	50.993	0.67104	50.969	50.815	51.486	-0.02343					26	19	2	0	0	0	0.70737	1	4490	4490		30.318	1.1682	1	89326	+		35357	23712	23421	23430	40333	40333					0.09510602511409161
LVAARLPE	8	Unmodified	_LVAARLPE_					0	0	0			REV__chr17:62966749-63009537|55|25.42|0.0|21.28|+|2|TANC2,TANC2|1	REV__chr17:62966749-63009537|55|25.42|0.0|21.28|+|2|TANC2,TANC2|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799377441406	2	434.766178	867.517802	0.21473	9.3358E-05	0.85475	0.00037162	1.0695	0.00046497	434.76723508249137	42.971	0.12835	43.036	42.949	43.078	0.065037					4	2	2	0	0	0	0.4196	1	2922	2922		19.36	0	1	23516	+		35358	15663	23422	23431	40334	40334					0.07874392622704818
LVAARWAD	8	Unmodified	_LVAARWAD_					0	0	0			REV__ENST00000514698.5_1_4:980866-997838:+|nuORF	REV__ENST00000514698.5_1_4:980866-997838:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.24847412109375	2	451.248152	900.481751	-1.2852	-0.00057995	3.0375	0.0013707	1.7523	0.0007907	451.2493154558184	65.489	1.09	65.618	64.991	66.081	0.12995					90	51	3	0	0	0	0.87479	1	5772	5772		30.504	5.0535	1	1216500	+		35359	18733	23423	23432	40335	40335					0.027529354458465605
LVAAVRVAEV	10	Unmodified	_LVAAVRVAEV_					0	0	0		ENSG00000179044|ENST00000314586|EXOC3L1	ENSG00000179044|ENST00000314586|EXOC3L1	ENSG00000179044|ENST00000314586|EXOC3L1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8120727539062	2	513.818941	1025.62333	0.016444	8.4493E-06	-1.4279	-0.00073368	-1.4114	-0.00072523	513.818105461666	53.681	0.66582	53.676	53.314	53.979	-0.0053673					22	15	2	0	0	0	0.37624	1	4666	4666		19.997	0	1	126440			35360	7239	23424	23433	40336	40336					0.11154308748336916
LVACKVKA	8	Unmodified	_LVACKVKA_					0	0	0		ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.26092529296875	2	416.259674	830.504795	1.1453	0.00047672	1.1221	0.00046709	2.2674	0.00094381	416.2599930781406	16.881	0.65745	16.394	16.189	16.846	-0.48718					21	14	2	0	0	0	0.81724	1	184	184		14.664	1.7049	1	144260			35361	6723;4170	23425	23434	40337	40337					0.08276238238966016
LVACKVKA	8	Unmodified	_LVACKVKA_					0	0	0		ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	ENSG00000171914|ENST00000636159|TLN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	416.259674	830.504795	0.91158	0.00037945	1.2488	0.00051982	2.1604	0.00089927	416.260099472716	16.497	0.33282	16.574	16.341	16.674	0.07715	0.13081	-0.0005584	NaN	14.664	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71743			35362	6723;4170	23425	23434							0.08276238238966016
LVACKVKA	8	Unmodified	_LVACKVKA_					0	0	0		ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	ENSG00000171914|ENST00000636159|TLN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	416.259674	830.504795	-0.40522	-0.00016868	2.3883	0.00099417	1.9831	0.00082549	416.26053418079704	16.554	0.17049	16.474	16.381	16.551	-0.080017	0.030702	0.0003903	NaN	14.664	12	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71902			35363	6723;4170	23425	23434							0.08276238238966016
LVACKVKA	8	Unmodified	_LVACKVKA_					0	0	0		ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	ENSG00000171914|ENST00000636159|TLN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	416.259674	830.504795	-1.9294	-0.00080312	4.0163	0.0016718	2.0869	0.00086869	416.2611813181603	16.523	0.38018	16.57	16.33	16.71	0.047804	0.12671	0.0017456	NaN	14.664	28	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102470			35364	6723;4170	23425	23434							0.08276238238966016
LVACKVKA	8	Unmodified	_LVACKVKA_					0	0	0		ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	ENSG00000171914|ENST00000636159|TLN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	416.259674	830.504795	0.012695	5.2846E-06	2.151	0.0008954	2.1637	0.00090068	416.2604941064378	16.387	0.35485	16.446	16.338	16.692	0.059269	0.0025787	0.00019276	NaN	14.664	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136930			35365	6723;4170	23425	23434							0.08276238238966016
LVACKVKA	8	Unmodified	_LVACKVKA_					0	0	0		ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	ENSG00000171914|ENST00000636159|TLN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	416.259674	830.504795	0.48422	0.00020156	1.7746	0.00073868	2.2588	0.00094025	416.2603127806349	16.434	0.35062	16.41	16.317	16.668	-0.024035	-0.033483	-0.00012067	NaN	14.664	26	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108610			35366	6723;4170	23425	23434							0.08276238238966016
LVACKVKA	8	Unmodified	_LVACKVKA_					0	0	0		ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	ENSG00000171914|ENST00000636159|TLN2;nc|ENSG00000137076|Q9Y490-2|TLN1	ENSG00000171914|ENST00000636159|TLN2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	416.259674	830.504795	0.34013	0.00014158	1.7707	0.00073705	2.1108	0.00087864	416.2602651991648	16.847	0.70345	16.236	16.048	16.752	-0.6107	-0.20778	-0.00012393	NaN	14.664	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	201780			35367	6723;4170	23425	23434							0.08276238238966016
LVACLLFPLFS	11	Carbamidomethyl (C)	_LVAC(Carbamidomethyl (C))LLFPLFS_	LVAC(1)LLFPLFS		LVAC(51)LLFPLFS		0	1	0			REV__ENSG00000149485|ENST00000350997|FADS1	REV__ENSG00000149485|ENST00000350997|FADS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3569946289062	2	640.359585	1278.70462	0.92817	0.00059436	-2.0764	-0.0013297	-1.1483	-0.0007353	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.50804	1	10288	10288		51.335	6.9583	1	603720	+		35368	20172	23426	23435	40338	40338	255				0.0764124839604392
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7795715332031	2	434.778754	867.542954	0.20501	8.9135E-05	2.1081	0.00091654	2.3131	0.0010057	434.77952396468385	43.343	2.099	43.316	42.291	44.39	-0.026768					151	50	4	0	0	0	0.89457	1	3357	3357		37.028	0	1	2133200	+		35369	24596	23427	23436	40339	40339					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.778564453125	2	434.778754	867.542954	-0.097946	-4.2585E-05	2.9953	0.0013023	2.8973	0.0012597	434.7799034741548	53.402	2.1549	53.397	52.578	54.733	-0.0053673					128	65	3	0	0	0	0.86791	1	4804	4804		28.254	0	1	357680	+		35370	24596	23427	23436	40340	40340					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7805480957031	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.158	1	55.15	54.65	55.65	-0.0077095								0	0	0	0.30316	1	4899	4899		42.474	0	1		+		35371	24596	23427	23436	40341	40341					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77978515625	2	434.778754	867.542954	-0.47801	-0.00020783	4.1901	0.0018218	3.7121	0.0016139	434.78031491435894	33.573	1.1529	33.517	32.851	34.004	-0.056385					70	27	4	0	0	0	0.86791	1	2032	2032		28.254	0	1	421000	+		35372	24596	23427	23436	40342	40342					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77978515625	2	434.778754	867.542954	-0.81007	-0.0003522	3.4341	0.0014931	2.624	0.0011409	434.7801064754335	48.077	2.7534	48.052	47.541	50.295	-0.025112					179	68	4	0	0	0	0.89457	1	4159	4159		37.028	0	1	1940000	+		35373	24596	23427	23436	40343	40343					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7800598144531	2	434.778754	867.542954	-0.52026	-0.0002262	3.3297	0.0014477	2.8095	0.0012215	434.78008033903114	55.345	1.972	55.318	54.208	56.18	-0.027275					116	58	3	0	0	0	0.91005	2	4977	4977;5025		42.474	8.9589	1	290730	+		35374	24596	23427	23436	40344;40345	40344					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77947998046875	2	434.778754	867.542954	0.065326	2.8402E-05	2.9647	0.001289	3.03	0.0013174	434.77998820567853	59.638	2.2284	59.606	58.812	61.04	-0.031731					117	63	3	0	0	0	0.884	1	5763	5763		33.516	0	1	254430	+		35375	24596	23427	23436	40346	40346					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2811584472656	2	434.778754	867.542954	-0.041698	-1.813E-05	2.7567	0.0011986	2.715	0.0011804	434.7799495779998	61.609	1.1389	61.576	61.414	62.553	-0.033173					78	49	2	0	0	0	0.86791	1	5893	5893		28.254	0	1	301770	+		35376	24596	23427	23436	40347	40347					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.780029296875	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.47	1	58.439	57.939	58.939	-0.030888								0	0	0	0.29353	1	5438	5438		28.254	2.8041	1		+		35377	24596	23427	23436	40348	40348					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77978515625	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.471	1	66.435	65.935	66.935	-0.035217								0	0	0	0.30125	1	6357	6357		20.482	0	1		+		35378	24596	23427	23436	40349	40349					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78167724609375	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.31	1	67.275	66.775	67.775	-0.035698								0	0	0	0.29452	1	6459	6459		33.516	0	1		+		35379	24596	23427	23436	40350	40350					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77978515625	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.481	1	67.446	66.946	67.946	-0.035698								0	0	0	0.29631	1	6479	6479		25.45	0	1		+		35380	24596	23427	23436	40351	40351					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7804870605469	2	434.778754	867.542954	1.0211	0.00044394	2.4757	0.0010764	3.4967	0.0015203	434.77962104590523	33.405	1.0416	33.404	32.826	33.868	-0.0016365					60	24	3	0	0	0	0.89962	1	1941	1941		38.806	0	1	347080	+		35381	24596	23427	23436	40352	40352					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7798156738281	2	434.778754	867.542954	1.0906	0.00047416	1.4824	0.00064451	2.573	0.0011187	434.77927379886756	45.133	1.9101	45.129	44.288	46.198	-0.0041618					129	44	4	0	0	0	0.92457	1	3620	3620		47.916	5.4411	1	1333000	+		35382	24596	23427	23436	40353	40353					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7796936035156	2	434.778754	867.542954	0.76603	0.00033306	3.2628	0.0014186	4.0288	0.0017516	434.77972097925357	57.028	2.3704	57.061	56.581	58.952	0.033184					147	79	3	0	0	0	0.81548	1	5306	5306		20.482	0	1	337650	+		35383	24596	23427	23436	40354	40354					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77984619140625	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.86791	1	3268	3268		28.254	0	1	1177900	+		35384	24596	23427	23436	40355	40355					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7798156738281	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.884	1	3676	3676		33.516	0	1	1959200	+		35385	24596	23427	23436	40356	40356					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.86791	1	3457	3457		28.254	0	1	2750200	+		35386	24596	23427	23436	40357	40357					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.779296875	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.86791	1	3597	3597		28.254	0	1	1986600	+		35387	24596	23427	23436	40358	40358					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7800598144531	2	434.778754	867.542954	0.3261	0.00014178	2.4294	0.0010563	2.7555	0.0011981	434.77975339221	54.99	1.8925	55.081	54.473	56.365	0.091167					101	62	2	0	0	0	0.86791	1	4515	4515		28.254	0	1	456330	+		35388	24596	23427	23436	40359	40359					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7795104980469	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.884	1	3759	3759		33.516	0	1	2175000	+		35389	24596	23427	23436	40360	40360					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7793884277344	2	434.778754	867.542954	-0.61408	-0.00026699	3.3286	0.0014472	2.7146	0.0011802	434.78015323105376	52.924	3.3917	52.849	52.471	55.862	-0.074512					147	100	2	0	0	0	0.81548	5	4515	4287;4315;4412;4497;4515		37.159	3.674	1	526750	+		35390	24596	23427	23436	40361;40362;40363;40364;40365	40365					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77984619140625	2	434.778754	867.542954	-0.89312	-0.00038831	3.6526	0.0015881	2.7595	0.0011998	434.7802679041939	61.693	0.95562	61.709	61.315	62.27	0.015724					65	41	2	0	0	0	0.93529	1	5413	5413		52.299	5.5327	1	303610	+		35391	24596	23427	23436	40366	40366					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7767028808594	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.334	1	66.379	65.879	66.879	0.045113								0	0	0	0.30125	1	5876	5876		20.482	0	1		+		35392	24596	23427	23436	40367	40367					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7803649902344	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.585	1	66.638	66.138	67.138	0.052368								0	0	0	0.29452	1	5903	5903		33.516	0	1		+		35393	24596	23427	23436	40368	40368					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7796936035156	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.89962	1	3298	3298		38.806	0	1	15771000	+		35394	24596	23427	23436	40369	40369					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7797546386719	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.27	1	64.824	64.324	65.324	0.55386								0	0	0	0.29452	1	6960	6960		33.516	0	1		+		35395	24596	23427	23436	40370	40370					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7802429199219	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.235	1	65.788	65.288	66.288	0.5526								0	0	0	0.29452	1	7099	7099		33.516	0	1		+		35396	24596	23427	23436	40371	40371					0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	434.778754	867.542954	0.065326	2.8402E-05	2.9647	0.001289	3.03	0.0013174	434.77998820567853	59.638	2.2284	59.606	58.812	61.04	-0.031731	-0.11215	-0.00043857	NaN	33.516	117	63	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254430	+		35397	24596	23427	23436							0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.778754	867.542954	-1.6064	-0.00069844	4.6934	0.0020406	3.087	0.0013422	434.7807457453782	59.58	2.3835	59.674	58.765	61.149	0.094059	-0.044577	0.0010647	NaN	33.516	154	91	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	363030	+		35398	24596	23427	23436							0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	434.778754	867.542954	0.36515	0.00015876	2.7238	0.0011842	3.0889	0.001343	434.7798909966146	59.692	2.5452	59.806	58.63	61.175	0.11396	0.087873	-0.00064806	NaN	33.516	168	93	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	312730	+		35399	24596	23427	23436							0.10388447425293634
LVADKPLL	8	Unmodified	_LVADKPLL_					0	0	0			REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	REV__ENST00000278616.8_1_11:108114757-108114799:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	434.778754	867.542954	-0.82346	-0.00035802	3.9693	0.0017258	3.1459	0.0013678	434.78040358817407	59.787	1.8399	59.787	58.995	60.835	0.00051117	0.068856	0.00043504	NaN	33.516	123	60	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	311300	+		35400	24596	23427	23436							0.10388447425293634
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79620361328125	2	491.794601	981.574648	-1.5825	-0.00077825	3.8326	0.0018849	2.2502	0.0011066	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.77546	1	3431	3431		31.955	1.4512	1	2891800			35401	8133	23428	23437	40372	40372					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79595947265625	2	491.794601	981.574648	-1.5463	-0.00076044	3.9179	0.0019268	2.3717	0.0011664	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.76402	4	3966	3918;3966;4021;4033		35.201	7.4361	1	1240000			35402	8133	23428	23437	40373;40374;40375;40376	40374					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7929382324219	2	491.794601	981.574648	-1.4502	-0.0007132	3.9522	0.0019437	2.502	0.0012305	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.76996	2	4662	4662;4717		33.516	6.7195	1	1043600			35403	8133	23428	23437	40377;40378	40377					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79547119140625	2	491.794601	981.574648	0.21767	0.00010705	1.776	0.00087342	1.9937	0.00098047	491.79537288056144	45.526	1.3498	45.507	44.705	46.055	-0.018581					75	31	3	0	0	0	0.77546	1	3657	3657		31.955	1.4512	1	529090			35404	8133	23428	23437	40379	40379					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79547119140625	2	491.794601	981.574648	0.09879	4.8585E-05	2.3098	0.001136	2.4086	0.0011846	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.5393	1	4237	4237		50.025	9.4519	1	1349600			35405	8133	23428	23437	40380	40380					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7962646484375	2	491.794601	981.574648	0.019467	9.5736E-06	2.4962	0.0012276	2.5157	0.0012372	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.76996	4	4381	4357;4381;4431;4467		33.516	8.0654	1	310050			35406	8133	23428	23437	40381;40382;40383;40384	40382					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7972412109375	2	491.794601	981.574648	-0.035071	-1.7248E-05	2.5354	0.0012469	2.5003	0.0012296	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.76402	2	4856	4847;4856		35.201	0.10319	1	1625300			35407	8133	23428	23437	40385;40386	40386					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7954406738281	2	491.794601	981.574648	-0.64291	-0.00031618	3.0888	0.001519	2.4459	0.0012029	491.79609453871643	50.642	0.51759	50.619	50.252	50.77	-0.02343					22	13	2	0	0	0	0.76996	1	4369	4369		33.516	8.0654	1	333610			35408	8133	23428	23437	40387	40387					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7959899902344	2	491.794601	981.574648	-0.62954	-0.00030961	3.1153	0.0015321	2.4858	0.0012225	491.79606037186466	51.204	1.5616	51.18	50.34	51.902	-0.02343					100	43	3	0	0	0	0.76996	2	4503	4447;4503		33.516	4.366	1	394140			35409	8133	23428	23437	40388;40389	40389					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7957763671875	2	491.794601	981.574648	-0.36021	-0.00017715	2.6619	0.0013091	2.3017	0.001132	491.79587618632917	55.368	1.5692	55.341	54.702	56.271	-0.027279					123	47	4	0	0	0	0.77546	1	5085	5085		31.955	6.5047	1	1374900			35410	8133	23428	23437	40390	40390					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79559326171875	2	491.794601	981.574648	-2.0246	-0.0009957	3.9467	0.001941	1.9221	0.00094526	491.79643169128343	45.478	1.3283	45.474	44.66	45.989	-0.0041618					90	30	4	0	0	0	0.7932	1	3674	3674		25.45	1.2474	1	433340			35411	8133	23428	23437	40391	40391					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7949523925781	2	491.794601	981.574648	-1.9212	-0.00094481	4.4317	0.0021795	2.5106	0.0012347	491.7967978123057	73.119	0.75326	73.161	72.514	73.267	0.042114					44	31	2	0	0	0	0.7932	1	7057	7057		26.796	0	1	96217			35412	8133	23428	23437	40392	40392					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7972106933594	2	491.794601	981.574648	-0.72034	-0.00035426	2.8582	0.0014057	2.1379	0.0010514	491.7958614454625	45.142	1.3703	45.154	44.592	45.963	0.012058					80	34	3	0	0	0	0.7932	2	3319	3224;3319		26.796	1.995	1	396090			35413	8133	23428	23437	40393;40394	40394					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.796142578125	2	491.794601	981.574648	-0.71756	-0.00035289	3.0037	0.0014772	2.2862	0.0011243	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.7932	1	3367	3367		26.796	4.8362	1	2747400			35414	8133	23428	23437	40395	40395					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956848144531	2	491.794601	981.574648	-0.71316	-0.00035073	3.1449	0.0015467	2.4318	0.0011959	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.76996	2	3912	3794;3912		33.516	6.7195	1	1219600			35415	8133	23428	23437	40396;40397	40397					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956237792969	2	491.794601	981.574648	-0.71044	-0.00034939	3.0101	0.0014803	2.2996	0.001131	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.77546	3	4161	4001;4023;4161		31.955	6.5047	1	571510			35416	8133	23428	23437	40398;40399;40400	40400					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7954406738281	2	491.794601	981.574648	-0.70573	-0.00034708	2.912	0.0014321	2.2063	0.001085	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.7932	1	4476	4476		25.45	0	1	772710			35417	8133	23428	23437	40401	40401					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7959289550781	2	491.794601	981.574648	-0.70147	-0.00034498	3.2327	0.0015898	2.5312	0.0012448	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.7932	1	4592	4592		26.796	0	1	1759500			35418	8133	23428	23437	40402	40402					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.796142578125	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.965	1	57.037	56.537	57.537	0.071835								0	0	0	0.31828	1	4810	4810		24.203	1.1603	1				35419	8133	23428	23437	40403	40403					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.795654296875	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.303	1	59.397	58.897	59.897	0.094059								0	0	0	0.2969	1	5073	5073		31.955	0	1				35420	8133	23428	23437	40404	40404					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7950439453125	2	491.794601	981.574648	0.32756	0.00016109	1.929	0.00094865	2.2565	0.0011097	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.7932	1	3954	3954		26.796	1.3459	1	1346800			35421	8133	23428	23437	40405	40405					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7959289550781	2	491.794601	981.574648	0.34914	0.0001717	2.1653	0.0010649	2.5144	0.0012366	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.76996	2	4010	4010;4155		33.516	9.3128	1	581270			35422	8133	23428	23437	40406;40407	40406					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79779052734375	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.746	1	62.867	62.367	63.367	0.1209								0	0	0	0.31472	1	5478	5478		25.45	6.0902	1				35423	8133	23428	23437	40408	40408					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7956848144531	2	491.794601	981.574648	-0.17405	-8.5598E-05	2.4406	0.0012003	2.2666	0.0011147	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.7932	1	3466	3466		25.45	3.4903	1	2994900			35424	8133	23428	23437	40409	40409					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79559326171875	2	491.794601	981.574648	-0.25318	-0.00012451	2.5897	0.0012736	2.3365	0.0011491	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.7932	3	3739	3739;3945;3963		25.45	2.4135	1	1502200			35425	8133	23428	23437	40410;40411;40412	40410					0.08312395388577443
LVAEDIPLL	9	Unmodified	_LVAEDIPLL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7964172363281	2	491.794601	981.574648	-0.47857	-0.00023536	2.9858	0.0014684	2.5072	0.001233	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.7932	1	4552	4552		26.796	1.3459	1	1898900			35426	8133	23428	23437	40413	40413					0.08312395388577443
LVAEKLVDH	9	Unmodified	_LVAEKLVDH_					0	0	0			REV__ENSG00000008311|ENST00000417368|AASS	REV__ENSG00000008311|ENST00000417368|AASS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.753662109375	2	512.295299	1022.57605	0.74422	0.00038126	3.0522	0.0015636	3.7964	0.0019449	512.798271336225	67.015	0.60966	67.4	67.024	67.633	0.38515					30	18	2	0	0	0	0.20789	1	7340	7340		15.642	0	1	302090	+		35427	16135	23429	23438	40414	40414					0.06566029477323809
LVAFLRGGSL	10	Unmodified	_LVAFLRGGSL_					0	0	0		ENST00000492037.5_1_17:37785754-37792115:+|nuORF	ENST00000492037.5_1_17:37785754-37792115:+|nuORF	ENST00000492037.5_1_17:37785754-37792115:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.8146362304688	2	516.813659	1031.61277	-1.0727	-0.00055441	2.1212	0.0010962	1.0484	0.00054183	516.8146800707337	36.387	1.5803	36.396	35.568	37.148	0.0092773					63	34	2	0	0	0	0.8651	1	2374	2374		25.574	1.3713	1	103340			35428	12697	23430	23439	40415	40415					0.09822326093922129
LVAGIIPGV	9	Unmodified	_LVAGIIPGV_					0	0	0			REV__nc|ENSG00000171885|P55087-2|AQP4	REV__nc|ENSG00000171885|P55087-2|AQP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7758483886719	2	419.773471	837.53239	0.29636	0.0001244	3.1717	0.0013314	3.4681	0.0014558	419.77476468640464	52.151	1.1529	52.21	51.751	52.904	0.059719					66	36	3	0	0	0	0.72098	2	4204	4184;4204		39.021	1.5873	1	170490	+		35429	21783	23431	23440	40416;40417	40417					0.10712464770847419
LVAGIIPGV	9	Unmodified	_LVAGIIPGV_					0	0	0			REV__nc|ENSG00000171885|P55087-2|AQP4	REV__nc|ENSG00000171885|P55087-2|AQP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7738342285156	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.78292	1	3619	3619		29.842	0	1	184570000	+		35430	21783	23431	23440	40418	40418					0.10712464770847419
LVAGISGFVF	10	Unmodified	_LVAGISGFVF_					0	0	0		ENST00000471410.5_1_X:38422267-38546918:+|nuORF;ENSG00000156298|ENST00000378482|TSPAN7;chrX:38561627-38646262|25|12.32|0.5|4.64|+|ENST00000286824|TSPAN7,TSPAN7	ENST00000471410.5_1_X:38422267-38546918:+|nuORF;ENSG00000156298|ENST00000378482|TSPAN7	ENSG00000156298|ENST00000378482|TSPAN7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.2925109863281	2	505.289485	1008.56442	0.1005	5.078E-05	3.8343	0.0019374	3.9348	0.0019882	505.29135010740674	97.203	2.3609	97.251	96.739	99.1	0.048157					135	54	4	0	0	0	0.86305	1	10424	10424		31.955	1.4512	1	1336200			35431	12242;550	23432	23441	40419	40419					0.06047832454009949
LVAGISGFVF	10	Unmodified	_LVAGISGFVF_					0	0	0		ENST00000471410.5_1_X:38422267-38546918:+|nuORF;ENSG00000156298|ENST00000378482|TSPAN7;chrX:38561627-38646262|25|12.32|0.5|4.64|+|ENST00000286824|TSPAN7,TSPAN7	ENST00000471410.5_1_X:38422267-38546918:+|nuORF;ENSG00000156298|ENST00000378482|TSPAN7	ENSG00000156298|ENST00000378482|TSPAN7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34814453125	2	505.289485	1008.56442	0.42081	0.00021263	-4.3826	-0.0022145	-3.9618	-0.0020019	505.2868697089821	34.429	0.70435	34.639	34.234	34.938	0.21003					20	16	2	0	0	0	0.37624	1	2583	2583		40.573	6.4001	1	86563			35432	12242;550	23432	23441	40420	40420					0.06047832454009949
LVAGLAPLA	9	Unmodified	_LVAGLAPLA_					0	0	0			REV__ENSG00000027644|ENST00000368195|INSRR	REV__ENSG00000027644|ENST00000368195|INSRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7667236328125	2	412.765646	823.516739	-1.8992	-0.00078392	4.1525	0.001714	2.2533	0.0009301	412.76765198426614	41.794	3.0272	41.798	40.935	43.962	0.0043983					161	84	4	0	0	0	0.72098	1	2846	2846		39.021	5.5059	1	640430	+		35433	16264	23433	23442	40421	40421					0.0979217825380374
LVAGLAPLA	9	Unmodified	_LVAGLAPLA_					0	0	0			REV__ENSG00000027644|ENST00000368195|INSRR	REV__ENSG00000027644|ENST00000368195|INSRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7668151855469	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.78292	1	2747	2747		29.842	0	1	818920	+		35434	16264	23433	23442	40422	40422					0.0979217825380374
LVAGLAPLA	9	Unmodified	_LVAGLAPLA_					0	0	0			REV__ENSG00000027644|ENST00000368195|INSRR	REV__ENSG00000027644|ENST00000368195|INSRR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7669372558594	2	412.765646	823.516739	1.2488	0.00051545	2.3587	0.00097359	3.6075	0.001489	412.7664969922496	36.891	1.9427	37.376	36.231	38.174	0.48581					136	47	4	0	0	0	0.78292	1	2889	2889		29.842	8.1392	1	3061300	+		35435	16264	23433	23442	40423	40423					0.0979217825380374
LVAGNRIQR	9	Unmodified	_LVAGNRIQR_					0	0	0		ENSG00000162494|ENST00000376085|LRRC38	ENSG00000162494|ENST00000376085|LRRC38	ENSG00000162494|ENST00000376085|LRRC38	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8084106445312	2	513.811982	1025.60941	-1.4445	-0.00074222	-4.4488	-0.0022859	-5.8934	-0.0030281	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.7932	1	3850	3850		21.96	1.013	1	1675700			35436	5693	23434	23443	40424	40424					0.09763076039871521
LVAGPIVTV	9	Unmodified	_LVAGPIVTV_					0	0	0			REV__nc|ENSG00000168778|Q96GX1-2|TCTN2	REV__nc|ENSG00000168778|Q96GX1-2|TCTN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77935791015625	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.77546	1	3562	3562		31.955	2.1133	1	2175000	+		35437	30017	23435	23444	40425	40425					0.10388447425282266
LVAGPSLLCSP	11	Unmodified	_LVAGPSLLCSP_					0	0	0			REV__ENST00000394166.7_1_15:96874038-96874248:+|nuORF	REV__ENST00000394166.7_1_15:96874038-96874248:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.79296875	2	528.791535	1055.56852	-0.70681	-0.00037376	4.0791	0.002157	3.3723	0.0017832	528.7935602407883	36.229	1.4862	36.239	35.797	37.283	0.0092773					80	32	4	0	0	0	0.58425	1	2322	2322		45.972	0.95004	1	1332400	+		35438	26075	23436	23445	40426	40426					0.04295553885390291
LVAGSTRHS	9	Unmodified	_LVAGSTRHS_					0	0	0		ENST00000540673.1_1_12:64615457-64616017:-|nuORF	ENST00000540673.1_1_12:64615457-64616017:-|nuORF	ENST00000540673.1_1_12:64615457-64616017:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.256103515625	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.74721	2	8335	8280;8335		37.159	4.0885	1	1324500			35439	13503	23437	23446	40427;40428	40428					0.027191324691898444
LVAGVIPGV	9	Unmodified	_LVAGVIPGV_					0	0	0			REV__ENSG00000161798|ENST00000293599|AQP5	REV__ENSG00000161798|ENST00000293599|AQP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2663879394531	2	412.765646	823.516739	-1.2234	-0.00050499	3.8954	0.0016079	2.6719	0.0011029	412.7673243915212	41.944	1.8566	41.905	41.33	43.186	-0.038223					75	44	2	0	0	0	0.78292	1	3284	3284		29.842	0	1	796850	+		35440	20779	23438	23447	40429	40429					0.09792178253815109
LVAGVIPGV	9	Unmodified	_LVAGVIPGV_					0	0	0			REV__ENSG00000161798|ENST00000293599|AQP5	REV__ENSG00000161798|ENST00000293599|AQP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7667541503906	2	412.765646	823.516739	-1.8992	-0.00078392	4.1525	0.001714	2.2533	0.0009301	412.76765198426614	41.794	3.0272	41.798	40.935	43.962	0.0043983					161	84	4	0	0	0	0.7932	1	2836	2836		21.702	0	1	640430	+		35441	20779	23438	23447	40430	40430					0.09792178253815109
LVAGVIPGV	9	Unmodified	_LVAGVIPGV_					0	0	0			REV__ENSG00000161798|ENST00000293599|AQP5	REV__ENSG00000161798|ENST00000293599|AQP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7664794921875	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.78292	1	2826	2826		29.842	0	1	669780	+		35442	20779	23438	23447	40431	40431					0.09792178253815109
LVAGVIPGV	9	Unmodified	_LVAGVIPGV_					0	0	0			REV__ENSG00000161798|ENST00000293599|AQP5	REV__ENSG00000161798|ENST00000293599|AQP5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76629638671875	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.533	1	43.59	43.09	44.09	0.056744								0	0	0	0.32542	1	3009	3009		21.702	0	1		+		35443	20779	23438	23447	40432	40432					0.09792178253815109
LVAGVIPGV	9	Unmodified	_LVAGVIPGV_					0	0	0			REV__ENSG00000161798|ENST00000293599|AQP5	REV__ENSG00000161798|ENST00000293599|AQP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76678466796875	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.72098	1	2153	2153		39.021	0	1	1619400	+		35444	20779	23438	23447	40433	40433					0.09792178253815109
LVAGVIPGV	9	Unmodified	_LVAGVIPGV_					0	0	0			REV__ENSG00000161798|ENST00000293599|AQP5	REV__ENSG00000161798|ENST00000293599|AQP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.26708984375	2	412.765646	823.516739	-0.21056	-8.6912E-05	2.569	0.0010604	2.3584	0.00097348	412.76685422643334	40.116	1.6377	40.068	39.082	40.719	-0.04789					115	51	3	0	0	0	0.78292	1	2414	2414		29.842	0	1	699640	+		35445	20779	23438	23447	40434	40434					0.09792178253815109
LVAGVIPGV	9	Unmodified	_LVAGVIPGV_					0	0	0			REV__ENSG00000161798|ENST00000293599|AQP5	REV__ENSG00000161798|ENST00000293599|AQP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7664794921875	2	412.765646	823.516739	0.0029651	1.2239E-06	4.3428	0.0017925	4.3457	0.0017938	412.7672251340711	46.501	1.4809	46.972	46.254	47.735	0.47139					61	35	3	0	0	0	0.7932	1	4361	4361		21.702	0	1	936710	+		35446	20779	23438	23447	40435	40435					0.09792178253815109
LVAGVIPGV	9	Unmodified	_LVAGVIPGV_					0	0	0			REV__ENSG00000161798|ENST00000293599|AQP5	REV__ENSG00000161798|ENST00000293599|AQP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7670593261719	2	412.765646	823.516739	1.2488	0.00051545	2.3587	0.00097359	3.6075	0.001489	412.7664969922496	36.891	1.9427	37.376	36.231	38.174	0.48581					136	47	4	0	0	0	0.7932	1	2866	2866		21.702	0	1	3061300	+		35447	20779	23438	23447	40436	40436					0.09792178253815109
LVAHGKQLF	9	Unmodified	_LVAHGKQLF_					0	0	0		ENST00000478091.1_1_3:52561843-52562074:-|nuORF;nc|ENSG00000168268|Q9H857-4|NT5DC2;nc|ENSG00000168268|Q9H857|NT5DC2;nc|ENSG00000168268|Q9H857-3|NT5DC2;ENSG00000168268|ENST00000422318|NT5DC2	ENST00000478091.1_1_3:52561843-52562074:-|nuORF	ENST00000478091.1_1_3:52561843-52562074:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	507.3020935058594	2	506.800552	1011.58655	-0.65008	-0.00032946	1.6125	0.00081723	0.96246	0.00048778	506.8012923744614	46.783	1.6998	46.754	45.886	47.586	-0.028782					74	44	2	0	0	0	0.7932	1	3809	3809		24.203	0	1	223510			35448	6386	23439	23448	40437	40437					0.08122056922422871
LVAHGKQLF	9	Unmodified	_LVAHGKQLF_					0	0	0		ENST00000478091.1_1_3:52561843-52562074:-|nuORF;nc|ENSG00000168268|Q9H857-4|NT5DC2;nc|ENSG00000168268|Q9H857|NT5DC2;nc|ENSG00000168268|Q9H857-3|NT5DC2;ENSG00000168268|ENST00000422318|NT5DC2	ENST00000478091.1_1_3:52561843-52562074:-|nuORF	ENST00000478091.1_1_3:52561843-52562074:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80035400390625	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.7932	1	3131	3131		19.36	0	1	412810			35449	6386	23439	23448	40438	40438					0.08122056922422871
LVAIHAARGIL	11	Unmodified	_LVAIHAARGIL_					0	0	0			REV__ENSG00000082269|ENST00000418814|FAM135A	REV__ENSG00000082269|ENST00000418814|FAM135A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3640747070312	2	567.361308	1132.70806	0.39672	0.00022508	3.6187	0.0020531	4.0154	0.0022782	567.363221347754	44.24	2.8558	44.249	42.808	45.664	0.0084534					165	70	4	0	0	0	0.72228	1	3157	3157		27.882	8.7787	1	1167000	+		35450	16837	23440	23449	40439	40439					0.14701679284939928
LVAIIYAVA	9	Unmodified	_LVAIIYAVA_					0	0	0			REV__ENST00000487673.5_1_6:43111066-43128616:+|nuORF	REV__ENST00000487673.5_1_6:43111066-43128616:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.10198974609375	2	466.794404	931.574254	-0.064135	-2.9938E-05	-4.4105	-0.0020588	-4.4746	-0.0020887	466.7923280027997	25.99	0.88017	25.958	25.721	26.601	-0.032125					37	22	2	0	0	0	0.20789	1	1067	1067		14.664	0	1	56933	+		35451	17957	23441	23450	40440	40440					0.10573020459366944
LVAIKGGFLSA	11	Unmodified	_LVAIKGGFLSA_					0	0	0			REV__nc|ENSG00000184465|A2RRH5-2|WDR27	REV__nc|ENSG00000184465|A2RRH5-2|WDR27	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3277587890625	2	538.329142	1074.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.8	1	103.91	103.41	104.41	0.11685								0	0	0	0.56276	1	10994	10994		24.519	2.8334	1		+		35452	22681	23442	23451	40441	40441					0.10939479408148145
LVAIKGGFLSA	11	Unmodified	_LVAIKGGFLSA_					0	0	0			REV__nc|ENSG00000184465|A2RRH5-2|WDR27	REV__nc|ENSG00000184465|A2RRH5-2|WDR27	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3279418945312	2	538.329142	1074.64373	-1.4902	-0.0008022	-1.886	-0.0010153	-3.3762	-0.0018175	538.3280364010775	103.36	1.0546	103.48	103.07	104.12	0.11495					72	26	3	0	0	0	0.70737	1	10899	10899		30.318	8.3578	1	1412200	+		35453	22681	23442	23451	40442	40442					0.10939479408148145
LVAIKRSSTT	10	Unmodified	_LVAIKRSSTT_					0	0	0			REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.326904296875	2	538.327131	1074.63971	3.4335	0.0018483	-3.8831	-0.0020904	-0.44957	-0.00024201	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.80179	2	11025	11025;11109		39.253	7.298	1	75550000	+		35454	28661	23443	23452	40443;40444	40443					0.10537389914406958
LVAIKRSSTT	10	Unmodified	_LVAIKRSSTT_					0	0	0			REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3265991210938	2	538.327131	1074.63971	0.070633	3.8024E-05	-0.68681	-0.00036973	-0.61617	-0.0003317	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.86348	3	10662	10662;10857;10893		31.53	2.3803	1	109840000	+		35455	28661	23443	23452	40445;40446;40447	40445					0.10537389914406958
LVAIKRSSTT	10	Unmodified	_LVAIKRSSTT_					0	0	0			REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3273315429688	2	538.327131	1074.63971	0.84014	0.00045227	-1.3812	-0.00074354	-0.54107	-0.00029127	538.326371026974	100.85	3.8483	100.99	100.33	104.18	0.14352					341	94	6	0	0	0	0.86587	1	10753	10753		29.17	7.2102	1	92159000	+		35456	28661	23443	23452	40448	40448					0.10537389914406958
LVAIKRSSTT	10	Unmodified	_LVAIKRSSTT_					0	0	0			REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3273315429688	2	538.327131	1074.63971	-1.4902	-0.0008022	1.8503	0.00099607	0.36013	0.00019387	538.3280364010775	103.36	1.0546	103.48	103.07	104.12	0.11495					72	26	3	0	0	0	0.8651	1	10911	10911		25.574	1.0549	1	1412200	+		35457	28661	23443	23452	40449	40449					0.10537389914406958
LVAIKRSSTT	10	Unmodified	_LVAIKRSSTT_					0	0	0			REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3265380859375	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.8486	5	12297	12200;12224;12249;12297;12918		31.53	3.5259	1	4041000	+		35458	28661	23443	23452	40450;40451;40452;40453;40454	40453					0.10537389914406958
LVAIKRSSTT	10	Unmodified	_LVAIKRSSTT_					0	0	0			REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	REV__ENST00000554272.5_1_12:25215794-25219317:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.32763671875	2	538.327131	1074.63971	1.3454	0.00072427	-1.7871	-0.00096205	-0.4417	-0.00023778	538.3260218082069	100.6	2.6544	100.9	100.26	102.91	0.2999					222	70	6	0	0	0	0.8651	1	12137	12137		25.574	2.5316	1	18713000	+		35459	28661	23443	23452	40455	40455					0.10537389914406958
LVAILKGV	8	Unmodified	_LVAILKGV_					0	0	0		ENST00000519770.1_1_14:107042631-107042798:-|nuORF;nc|ENSG00000211972|A0A0C4DH42|IGHV3-66;nc|ENSG00000224650|A0A0B4J1X5|IGHV3-74;nc|ENSG00000211949|P01764|IGHV3-23;nc|ENSG00000211946|A0A0C4DH32|IGHV3-20;nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43;nc|ENSG00000211976|A0A0B4J1V6|IGHV3-73;nc|ENSG00000211965|A0A0A0MS15|IGHV3-49	ENST00000519770.1_1_14:107042631-107042798:-|nuORF	ENST00000519770.1_1_14:107042631-107042798:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78515625	2	406.783839	811.553125	0.20394	8.2959E-05	3.6434	0.0014821	3.8473	0.001565	406.7851787446003	29.647	1.7935	29.678	29.075	30.869	0.030947					149	52	4	0	0	0	0.82464	1	1452	1452		21.702	0	1	789640			35460	13144	23444	23453	40456	40456					0.1398105515052066
LVAILKGV	8	Unmodified	_LVAILKGV_					0	0	0		ENST00000519770.1_1_14:107042631-107042798:-|nuORF;nc|ENSG00000211972|A0A0C4DH42|IGHV3-66;nc|ENSG00000224650|A0A0B4J1X5|IGHV3-74;nc|ENSG00000211949|P01764|IGHV3-23;nc|ENSG00000211946|A0A0C4DH32|IGHV3-20;nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43;nc|ENSG00000211976|A0A0B4J1V6|IGHV3-73;nc|ENSG00000211965|A0A0A0MS15|IGHV3-49	ENST00000519770.1_1_14:107042631-107042798:-|nuORF	ENST00000519770.1_1_14:107042631-107042798:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7848205566406	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.85787	1	1379	1379		9.4706	0	1	1817700			35461	13144	23444	23453	40457	40457					0.1398105515052066
LVAILKGV	8	Unmodified	_LVAILKGV_					0	0	0		ENST00000519770.1_1_14:107042631-107042798:-|nuORF;nc|ENSG00000211972|A0A0C4DH42|IGHV3-66;nc|ENSG00000224650|A0A0B4J1X5|IGHV3-74;nc|ENSG00000211949|P01764|IGHV3-23;nc|ENSG00000211946|A0A0C4DH32|IGHV3-20;nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43;nc|ENSG00000211976|A0A0B4J1V6|IGHV3-73;nc|ENSG00000211965|A0A0A0MS15|IGHV3-49	ENST00000519770.1_1_14:107042631-107042798:-|nuORF	ENST00000519770.1_1_14:107042631-107042798:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78515625	2	406.783839	811.553125	0.13384	5.4446E-05	3.7055	0.0015073	3.8393	0.0015618	406.7852062914835	29.439	1.7033	29.41	28.91	30.613	-0.029207					106	38	4	0	0	0	0.82419	1	1838	1838		13.775	0	1	2367100			35462	13144	23444	23453	40458	40458					0.1398105515052066
LVAISLERYG	10	Unmodified	_LVAISLERYG_					0	0	0		ENSG00000163394|ENST00000295589|CCKAR	ENSG00000163394|ENST00000295589|CCKAR	ENSG00000163394|ENST00000295589|CCKAR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8202514648438	2	560.821681	1119.62881	-1.4169	-0.00079462	-1.874	-0.001051	-3.2909	-0.0018456	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.8651	1	9211	9211		25.574	1.3713	1	758020			35463	5792	23445	23454	40459	40459					0.07377987540144204
LVAKAIYGYS	10	Unmodified	_LVAKAIYGYS_					0	0	0			REV__ENSG00000204704|ENST00000377175|OR2W1	REV__ENSG00000204704|ENST00000377175|OR2W1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.8034057617188	2	542.8055	1083.59645	0.095296	5.1727E-05	-3.7394	-0.0020298	-3.6441	-0.001978	542.8032653042026	33.942	0.70278	34.152	33.901	34.604	0.21003					40	16	3	0	0	0	0.20477	1	2499	2499		84.916	2.675	1	834600	+		35464	23518	23446	23455	40460	40460					0.05799200137130356
LVAKGIRL	8	Unmodified	_LVAKGIRL_					0	0	0		nc|ENSG00000042832|P01266-2|TG;ENSG00000042832|ENST00000220616|TG	nc|ENSG00000042832|P01266-2|TG	nc|ENSG00000042832|P01266-2|TG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3005676269531	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.81724	1	6934	6934		14.664	0.88877	1	2081500			35465	939	23447	23456	40461	40461					0.14627262273359065
LVAKHPAPPP	10	Unmodified	_LVAKHPAPPP_					0	0	0			REV__ENST00000311268.7_1_12:6930714-6930912:+|nuORF	REV__ENST00000311268.7_1_12:6930714-6930912:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8086547851562	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.86452	1	4618	4618		30.504	5.0535	1	771120	+		35466	24902	23448	23457	40462	40462					0.0904234343945518
LVAKHVVKSSK	11	Unmodified	_LVAKHVVKSSK_					0	0	0			REV__ENSG00000170099|ENST00000341584|SERPINA6	REV__ENSG00000170099|ENST00000341584|SERPINA6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3784790039062	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.78085	1	2680	2680		15.333	1.8791	1	352020	+		35467	21630	23449	23458	40463	40463					0.15525931110823876
LVAKHVVKSSK	11	Unmodified	_LVAKHVVKSSK_					0	0	0			REV__ENSG00000170099|ENST00000341584|SERPINA6	REV__ENSG00000170099|ENST00000341584|SERPINA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3823852539062	2	598.379697	1194.74484	-0.19423	-0.00011622	3.3027	0.0019763	3.1085	0.00186	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.75164	1	2955	2955		21.686	0.73882	1	825320	+		35468	21630	23449	23458	40464	40464					0.15525931110823876
LVAKLGRL	8	Unmodified	_LVAKLGRL_					0	0	0			REV__nc|ENSG00000176095|Q92551-2|IP6K1	REV__nc|ENSG00000176095|Q92551-2|IP6K1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3003845214844	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.81724	1	6387	6387		14.664	0	1	1072400	+		35469	22107	23450	23459	40465	40465					0.14627262273381803
LVAKLGRL	8	Unmodified	_LVAKLGRL_					0	0	0			REV__nc|ENSG00000176095|Q92551-2|IP6K1	REV__nc|ENSG00000176095|Q92551-2|IP6K1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3002014160156	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.81724	1	7197	7197		14.664	0	1	1680500	+		35470	22107	23450	23459	40466	40466					0.14627262273381803
LVAKLGRL	8	Unmodified	_LVAKLGRL_					0	0	0			REV__nc|ENSG00000176095|Q92551-2|IP6K1	REV__nc|ENSG00000176095|Q92551-2|IP6K1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3001403808594	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.81548	1	6923	6923		20.482	0	1	2081500	+		35471	22107	23450	23459	40467	40467					0.14627262273381803
LVAKLGRL	8	Unmodified	_LVAKLGRL_					0	0	0			REV__nc|ENSG00000176095|Q92551-2|IP6K1	REV__nc|ENSG00000176095|Q92551-2|IP6K1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3002014160156	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.81724	2	6557	6557;6738		14.664	0	1	1852500	+		35472	22107	23450	23459	40468;40469	40468					0.14627262273381803
LVAKLGRL	8	Unmodified	_LVAKLGRL_					0	0	0			REV__nc|ENSG00000176095|Q92551-2|IP6K1	REV__nc|ENSG00000176095|Q92551-2|IP6K1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.29949951171875	2	435.300188	868.585822	-1.3785	-0.00060007	1.5278	0.00066505	0.14927	6.4979E-05	435.30073733409733	75.396	1.3729	75.483	74.943	76.316	0.087639					63	36	2	0	0	0	0.81724	1	7065	7065		14.664	0	1	527430	+		35473	22107	23450	23459	40470	40470					0.14627262273381803
LVAKPPRPAR	10	Unmodified	_LVAKPPRPAR_					0	0	0		ENST00000521987.1_1_21:46323429-46340825:-|nuORF;ENST00000522688.5_1_21:46330604-46340855:-|nuORF;ENST00000498666.5_1_21:46314678-46340855:-|nuORF	ENST00000521987.1_1_21:46323429-46340825:-|nuORF	ENST00000521987.1_1_21:46323429-46340825:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.84765625	2	552.85365	1103.69275	-1.2816	-0.00070855	-4.1341	-0.0022856	-5.4158	-0.0029941	552.8509329199625	45.194	1.0984	45.194	44.842	45.941	0					37	26	2	0	0	0	0.85466	1	3339	3339		20.947	3.582	1	90778			35474	12830	23451	23460	40471	40471					0.14504812487734853
LVAKPPRPAR	10	Unmodified	_LVAKPPRPAR_					0	0	0		ENST00000521987.1_1_21:46323429-46340825:-|nuORF;ENST00000522688.5_1_21:46330604-46340855:-|nuORF;ENST00000498666.5_1_21:46314678-46340855:-|nuORF	ENST00000521987.1_1_21:46323429-46340825:-|nuORF	ENST00000521987.1_1_21:46323429-46340825:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	552.85365	1103.69275	-0.42674	-0.00023593	-5.7961	-0.0032044	-6.2229	-0.0034403	552.8505602847486	45.576	1.347	45.557	44.881	46.228	-0.018585	0.38902	-0.00079278	NaN	20.947	38	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50291			35475	12830	23451	23460							0.14504812487734853
LVAKPPRPAR	10	Unmodified	_LVAKPPRPAR_					0	0	0		ENST00000521987.1_1_21:46323429-46340825:-|nuORF;ENST00000522688.5_1_21:46330604-46340855:-|nuORF;ENST00000498666.5_1_21:46314678-46340855:-|nuORF	ENST00000521987.1_1_21:46323429-46340825:-|nuORF	ENST00000521987.1_1_21:46323429-46340825:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	552.85365	1103.69275	0.079717	4.4072E-05	-5.6152	-0.0031044	-5.5354	-0.0030603	552.8504785543333	45.119	0.73193	45.05	44.768	45.5	-0.06863	-0.11853	-0.00059267	NaN	20.947	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55498			35476	12830	23451	23460							0.14504812487734853
LVAKPPRPAR	10	Unmodified	_LVAKPPRPAR_					0	0	0		ENST00000521987.1_1_21:46323429-46340825:-|nuORF;ENST00000522688.5_1_21:46330604-46340855:-|nuORF;ENST00000498666.5_1_21:46314678-46340855:-|nuORF	ENST00000521987.1_1_21:46323429-46340825:-|nuORF	ENST00000521987.1_1_21:46323429-46340825:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	552.85365	1103.69275	-0.96325	-0.00053253	-5.0077	-0.0027685	-5.9709	-0.0033011	552.850694875416	44.422	0.44326	44.872	44.649	45.093	0.45025	-0.29623	7.901E-05	NaN	20.947	11	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125650			35477	12830	23451	23460							0.14504812487734853
LVAKQGKLT	9	Unmodified	_LVAKQGKLT_					0	0	0			REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|39|2|sense	REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|39|2|sense	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3095703125	2	479.30821	956.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.74	1	57.774	57.274	58.274	0.033905								0	0	0	0.30053	1	5267	5267		30.504	1.3541	1		+		35478	29435	23452	23461	40472	40472					0.12182923719615246
LVAKRPVS	8	Unmodified	_LVAKRPVS_					0	0	0		ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.27880859375	2	435.281995	868.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.379	1	66.505	66.005	67.005	0.12649								0	0	0	0.29498	1	5894	5894		26.796	0	1				35479	12492	23453	23462	40473	40473					0.10990385376669565
LVAKVGLL	8	Unmodified	_LVAKVGLL_					0	0	0			REV__ENSG00000136381|ENST00000258886|IREB2	REV__ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78515625	2	406.783839	811.553125	-0.045049	-1.8325E-05	3.807	0.0015486	3.7619	0.0015303	406.78524079935227	33.287	0.97472	33.291	32.894	33.869	0.0030785					79	22	4	0	0	0	0.86294	1	1899	1899		8.8223	0	1	346170	+		35480	19307	23454	23463	40474	40474					0.1398105515053203
LVAKVGLL	8	Unmodified	_LVAKVGLL_					0	0	0			REV__ENSG00000136381|ENST00000258886|IREB2	REV__ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.785400390625	2	406.783839	811.553125	-0.12701	-5.1665E-05	4.0102	0.0016313	3.8832	0.0015796	406.7853480704683	34.439	1.4356	34.434	33.818	35.254	-0.0047417					125	35	4	0	0	0	0.86294	2	2114	2082;2114		35.201	0	1	1552500	+		35481	19307	23454	23463	40475;40476	40476					0.1398105515053203
LVAKVGLL	8	Unmodified	_LVAKVGLL_					0	0	0			REV__ENSG00000136381|ENST00000258886|IREB2	REV__ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.82419	1	1777	1777		13.775	0	1	1953100	+		35482	19307	23454	23463	40477	40477					0.1398105515053203
LVAKVGLL	8	Unmodified	_LVAKVGLL_					0	0	0			REV__ENSG00000136381|ENST00000258886|IREB2	REV__ENSG00000136381|ENST00000258886|IREB2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7850646972656	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.901	1	31.013	30.513	31.513	0.11198								0	0	0	0.31173	1	1391	1391		8.8223	0	1		+		35483	19307	23454	23463	40478	40478					0.1398105515053203
LVAKVGLL	8	Unmodified	_LVAKVGLL_					0	0	0			REV__ENSG00000136381|ENST00000258886|IREB2	REV__ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78515625	2	406.783839	811.553125	0.56827	0.00023116	3.0171	0.0012273	3.5854	0.0014585	406.78493901596437	31.598	1.6437	31.678	30.856	32.5	0.079834					110	37	4	0	0	0	0.81724	1	2246	2246		14.664	0	1	5409400	+		35484	19307	23454	23463	40479	40479					0.1398105515053203
LVAKVGLL	8	Unmodified	_LVAKVGLL_					0	0	0			REV__ENSG00000136381|ENST00000258886|IREB2	REV__ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7851867675781	2	406.783839	811.553125	1.6031	0.00065213	2.1137	0.0008598	3.7168	0.0015119	406.78457300863613	33.544	1.5003	33.714	33.314	34.814	0.16971					120	35	4	0	0	0	0.89457	1	2450	2450		37.028	0	1	8051400	+		35485	19307	23454	23463	40480	40480					0.1398105515053203
LVAKVGLL	8	Unmodified	_LVAKVGLL_					0	0	0			REV__ENSG00000136381|ENST00000258886|IREB2	REV__ENSG00000136381|ENST00000258886|IREB2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7851867675781	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.087	1	31.167	30.667	31.667	0.079834								0	0	0	0.31173	1	2079	2079		8.8223	0	1		+		35486	19307	23454	23463	40481	40481					0.1398105515053203
LVAKVRAL	8	Unmodified	_LVAKVRAL_					0	0	0		nc|ENSG00000167202|Q9UPU7-3|TBC1D2B;ENST00000472786.1_1_15:78295640-78309087:-|nuORF;nc|ENSG00000167202|Q9UPU7-2|TBC1D2B;ENSG00000167202|ENST00000300584|TBC1D2B	nc|ENSG00000167202|Q9UPU7-3|TBC1D2B	nc|ENSG00000167202|Q9UPU7-3|TBC1D2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3000183105469	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.80963	1	7237	7237		15.636	0	1	1921500			35487	6276	23455	23464	40482	40482					0.14627262273359065
LVALARPWT	9	Unmodified	_LVALARPWT_					0	0	0			REV__nc|ENSG00000273313|A6NC62|RBAKDN	REV__nc|ENSG00000273313|A6NC62|RBAKDN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8084716796875	2	513.808377	1025.6022	-1.4174	-0.00072826	2.551	0.0013107	1.1336	0.00058246	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.78983	1	4089	4089		27.882	0	1	1977600	+		35488	27787	23456	23465	40483	40483					0.09042343439477918
LVALARPWT	9	Unmodified	_LVALARPWT_					0	0	0			REV__nc|ENSG00000273313|A6NC62|RBAKDN	REV__nc|ENSG00000273313|A6NC62|RBAKDN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.808837890625	2	513.808377	1025.6022	0.034734	1.7846E-05	1.2224	0.00062807	1.2571	0.00064592	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.78983	1	4455	4455		27.882	1.1893	1	666950	+		35489	27787	23456	23465	40484	40484					0.09042343439477918
LVALARPWT	9	Unmodified	_LVALARPWT_					0	0	0			REV__nc|ENSG00000273313|A6NC62|RBAKDN	REV__nc|ENSG00000273313|A6NC62|RBAKDN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8090209960938	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.76255	1	4630	4630		35.618	2.1027	1	771120	+		35490	27787	23456	23465	40485	40485					0.09042343439477918
LVALARPWT	9	Unmodified	_LVALARPWT_					0	0	0			REV__nc|ENSG00000273313|A6NC62|RBAKDN	REV__nc|ENSG00000273313|A6NC62|RBAKDN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8070068359375	2	513.808377	1025.6022	-0.26337	-0.00013532	1.4503	0.00074519	1.187	0.00060987	513.8089696081398	52.202	2.125	52.215	51.482	53.607	0.012436					136	54	4	0	0	0	0.72402	1	4473	4473		38.806	3.6054	1	732880	+		35491	27787	23456	23465	40486	40486					0.09042343439477918
LVALIPYS	8	Unmodified	_LVALIPYS_					0	0	0		ENST00000420833.5_1_7:12258097-12270062:+|nuORF;ENSG00000106460|ENST00000396668|TMEM106B	ENST00000420833.5_1_7:12258097-12270062:+|nuORF	ENST00000420833.5_1_7:12258097-12270062:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2628479003906	2	438.265479	874.516405	-1.3297	-0.00058278	-3.1294	-0.0013715	-4.4591	-0.0019543	438.2640159596406	58.026	1.8731	58.42	57.697	59.57	0.39407					78	45	2	0	0	0	0.82464	1	6071	6071		21.702	0	1	1391400			35492	2298	23457	23466	40487	40487					0.07412758533951092
LVALLIVWWPV	11	Unmodified	_LVALLIVWWPV_					0	0	0			REV__ENST00000557555.1_3_12:56079014-56082669:-|nuORF	REV__ENST00000557555.1_3_12:56079014-56082669:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2735290527344	3	436.940798	1307.80057	1.2427	0.00054299	-3.7899	-0.001656	-2.5472	-0.001113	436.9390015295864	46.658	1.2437	46.654	46.284	47.528	-0.0041618					96	31	4	0	0	0	0.75544	1	3821	3821		20.837	2.3061	1	651950	+		35493	19220	23458	23467	40488	40488					0.15897764298438233
LVALLPTLS	9	Unmodified	_LVALLPTLS_					0	0	0			REV__ENST00000369983.3_1_10:104142119-104142224:+|nuORF	REV__ENST00000369983.3_1_10:104142119-104142224:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8004455566406	2	463.799686	925.584819	0.22161	0.00010278	1.3447	0.00062365	1.5663	0.00072643	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.7932	1	3492	3492		25.45	0	1	1570500	+		35494	25637	23459	23468	40489	40489					0.11905003113804469
LVALLRDEDRL	11	Unmodified	_LVALLRDEDRL_					0	0	0		nc|ENSG00000063245|Q9Y6I3-3|EPN1;ENSG00000063245|ENST00000270460|EPN1;nc|ENSG00000063245|Q9Y6I3-1|EPN1	nc|ENSG00000063245|Q9Y6I3-3|EPN1	nc|ENSG00000063245|Q9Y6I3-3|EPN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.25701904296875	3	438.257626	1311.75105	-2.0264	-0.0008881	2.1632	0.00094804	0.13677	5.994E-05	438.2585447663128	30.099	0.96018	30.099	29.739	30.699	0					100	33	5	0	0	0	0.71207	1	1392	1392		29.551	2.5034	1	863580			35495	1091	23460	23469	40490	40490					0.10764404551696316
LVALLTLAD	9	Unmodified	_LVALLTLAD_					0	0	0		ENST00000557184.1_1_14:54976944-54997777:+|nuORF;ENST00000556216.5_1_14:54997446-55005098:+|nuORF;ENSG00000100532|ENST00000216420|CGRRF1	ENST00000557184.1_1_14:54976944-54997777:+|nuORF	ENST00000557184.1_1_14:54976944-54997777:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.79107666015625	2	464.789318	927.564084	0.17035	7.9177E-05	2.8409	0.0013204	3.0113	0.0013996	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.7932	1	1726	1726		18.324	0.95945	1	283920			35496	1846	23461	23470	40491	40491					0.09740412734129222
LVALLVALD	9	Unmodified	_LVALLVALD_					0	0	0			REV__ENST00000586142.5_1_18:43309173-43309326:+|nuORF	REV__ENST00000586142.5_1_18:43309173-43309326:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8011474609375	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.7932	1	3648	3648		12.959	0.75233	1	269820	+		35497	29100	23462	23471	40492	40492					0.11905003113804469
LVALMAGKA	9	Unmodified	_LVALMAGKA_					0	0	0		nc|ENSG00000123191|P35670-3|ATP7B;nc|ENSG00000123191|P35670-4|ATP7B;ENSG00000123191|ENST00000242839|ATP7B;nc|ENSG00000123191|P35670-2|ATP7B;ENST00000483772.1_1_13:52538956-52548098:-|nuORF;nc|ENSG00000165240|Q04656-5|ATP7A;ENSG00000165240|ENST00000341514|ATP7A;nc|ENSG00000165240|Q04656-2|ATP7A;nc|ENSG00000165240|Q04656-3|ATP7A	nc|ENSG00000123191|P35670-3|ATP7B;nc|ENSG00000165240|Q04656-5|ATP7A	nc|ENSG00000123191|P35670-3|ATP7B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2657775878906	2	437.264956	872.515359	0.27465	0.0001201	1.0913	0.00047719	1.3659	0.00059728	437.2655143696572	24.107	1.3602	23.725	23.153	24.514	-0.38178					100	30	5	0	0	0	0.7932	1	1104	1104		25.45	0	1	12963000			35498	3264;6063	23463	23472	40493	40493					0.07400220893396181
LVALPISSL	9	Unmodified	_LVALPISSL_					0	0	0			REV__ENST00000404796.2_1_9:22029533-22032783:+|nuORF	REV__ENST00000404796.2_1_9:22029533-22032783:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7900695800781	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.7932	1	3067	3067		26.796	1.3459	1	548640	+		35499	26284	23464	23473	40494	40494					0.10984716596760791
LVALPISSL	9	Unmodified	_LVALPISSL_					0	0	0			REV__ENST00000404796.2_1_9:22029533-22032783:+|nuORF	REV__ENST00000404796.2_1_9:22029533-22032783:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7922668457031	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.062	1	38.004	37.504	38.504	-0.057915								0	0	0	0.31828	1	2224	2224		24.203	0	1		+		35500	26284	23464	23473	40495	40495					0.10984716596760791
LVALPLDP	8	Unmodified	_LVALPLDP_					0	0	0		ENST00000375412.9_2_9:96212872-96214941:-|nuORF	ENST00000375412.9_2_9:96212872-96214941:-|nuORF	ENST00000375412.9_2_9:96212872-96214941:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.77496337890625	2	419.257654	836.500755	0.21582	9.0486E-05	1.4619	0.00061292	1.6777	0.0007034	419.2539098349623	42.525	0.9272	42.496	41.952	42.879	-0.029461					34	22	3	0	0	0	0.4196	1	3138	3138		44.531	0	1	39146			35501	10798	23465	23474	40496	40496					0.0759647201689404
LVALPWSN	8	Unmodified	_LVALPWSN_					0	0	0			REV__ENST00000547586.5_1_12:56391493-56393213:+|nuORF	REV__ENST00000547586.5_1_12:56391493-56393213:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.27435302734375	2	450.252903	898.491253	1.3255	0.00059681	1.0946	0.00049284	2.4201	0.0010897	450.25327573035	93.255	0.16682	93.301	93.239	93.406	0.045448					7	3	3	0	0	0	0.4196	1	9773	9773		40.573	5.3719	1	83943	+		35502	28553	23466	23475	40497	40497					0.037947037313642795
LVALPWSN	8	Unmodified	_LVALPWSN_					0	0	0			REV__ENST00000547586.5_1_12:56391493-56393213:+|nuORF	REV__ENST00000547586.5_1_12:56391493-56393213:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2744445800781	2	450.252903	898.491253	1.3302	0.00059894	-4.4589	-0.0020076	-3.1287	-0.0014087	450.249242904595	93.511	0.25921	93.557	93.449	93.708	0.045448					7	5	2	0	0	0	0.4196	1	9833	9833		37.159	0	1	29867	+		35503	28553	23466	23475	40498	40498					0.037947037313642795
LVALTKKLDY	10	Unmodified	_LVALTKKLDY_					0	0	0			REV__ENSG00000152127|ENST00000281923|MGAT5	REV__ENSG00000152127|ENST00000281923|MGAT5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.353515625	2	582.355357	1162.69616	-0.84093	-0.00048972	-2.4295	-0.0014149	-3.2705	-0.0019046	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.86718	1	11568	11568		27.882	0.83493	1	77752000	+		35504	20286	23467	23476	40499	40499					0.12132017751082458
LVALVAKV	8	Unmodified	_LVALVAKV_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7850341796875	2	406.783839	811.553125	1.2307	0.00050062	2.609	0.0010613	3.8397	0.0015619	406.7847800610387	35.56	4.0123	35.569	35.212	39.224	0.0092812					187	90	4	0	0	0	0.82464	1	2270	2270		21.702	0	1	403450	+		35505	16310	23468	23477	40500	40500					0.13981055150509292
LVALVLIAVL	10	Unmodified	_LVALVLIAVL_					0	0	0			REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	REV__ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.3605346679688	2	512.362453	1022.71035	-0.36988	-0.00018951	-2.115	-0.0010836	-2.4848	-0.0012731	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.87636	1	7211	7211		12.959	0	1	304520	+		35506	19188	23469	23478	40501	40501					0.1999071497003797
LVANTSNS	8	Unmodified	_LVANTSNS_					0	0	0		ENSG00000170385|ENST00000367001|SLC30A1	ENSG00000170385|ENST00000367001|SLC30A1	ENSG00000170385|ENST00000367001|SLC30A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.20953369140625	2	403.20615	804.397747	2.9266	0.00118	4.1333	0.0016666	7.0599	0.0028466	403.2077473802554	85.716	2.0213	85.774	85.282	87.304	0.057899					111	46	4	0	0	0	0.89494	1	8676	8676		37.159	0.13063	1	1450600			35507	6582	23470	23479	40502	40502					-0.012276404417093545
LVAPDLLE	8	Unmodified	_LVAPDLLE_					0	0	0		ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;ENST00000471834.1_1_6:152657861-152688565:-|nuORF	ENSG00000131018|ENST00000367255|SYNE1	ENSG00000131018|ENST00000367255|SYNE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.252197265625	2	435.252569	868.490584	-0.16595	-7.2231E-05	-2.6833	-0.0011679	-2.8492	-0.0012401	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87276	1	8299	8299		29.842	0	1	2823900			35508	3707	23471	23480	40503	40503					0.0510786429166501
LVAPLAAAL	9	Unmodified	_LVAPLAAAL_					0	0	0			REV__ENST00000529993.5_1_11:68171724-68216535:+|nuORF	REV__ENST00000529993.5_1_11:68171724-68216535:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7715148925781	2	419.773471	837.53239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.581	1	58.55	58.05	59.05	-0.030888								0	0	0	0.2792	1	5453	5453		39.021	9.18	1		+		35509	28276	23472	23481	40504	40504					0.10712464770847419
LVAPLLKE	8	Unmodified	_LVAPLLKE_					0	0	0			REV__nc|ENSG00000177034|Q5HYI7-2|MTX3	REV__nc|ENSG00000177034|Q5HYI7-2|MTX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7876892089844	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.87276	1	3404	3404		29.842	0	1	325400	+		35510	30055	23473	23482	40505	40505					0.11308733942325944
LVAPLLLELA	10	Unmodified	_LVAPLLLELA_					0	0	0		ENSG00000164976|ENST00000297625|MYORG	ENSG00000164976|ENST00000297625|MYORG	ENSG00000164976|ENST00000297625|MYORG	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3611450195312	2	526.341718	1050.66888	-0.026305	-1.3845E-05	3.105	0.0016343	3.0787	0.0016204	526.3433329340992	35.371	0.21096	35.358	35.17	35.381	-0.012203					6	4	2	0	0	0	0.37624	1	2171	2171		12.207	0	1	81225			35511	6033	23474	23483	40506	40506					0.1455753421071222
LVAPLVLTS	9	Unmodified	_LVAPLVLTS_					0	0	0		nc|ENSG00000132824|Q13530-2|SERINC3;ENSG00000132824|ENST00000342374|SERINC3	nc|ENSG00000132824|Q13530-2|SERINC3	nc|ENSG00000132824|Q13530-2|SERINC3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7915344238281	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.7932	1	3956	3956		18.324	4.5491	1	186860			35512	3831	23475	23484	40507	40507					0.10984716596738053
LVAPPPLT	8	Unmodified	_LVAPPPLT_					0	0	0			REV__ENST00000418115.5_1_3:49449357-49449522:-|nuORF	REV__ENST00000418115.5_1_3:49449357-49449522:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.57489013671875	2	404.252372	806.49019	0.40355	0.00016314	-4.102	-0.0016582	-3.6985	-0.0014951	404.25063091427296	82.003	1.4594	81.94	81.389	82.848	-0.062935					43	33	2	0	0	0	0.4196	1	8375	8375		14.664	0	1	67892	+		35513	26452	23476	23485	40508	40508					0.07920489362459193
LVAQKHIFA	9	Unmodified	_LVAQKHIFA_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8111572265625	2	513.808377	1025.6022	-0.38547	-0.00019806	1.7192	0.00088333	1.3337	0.00068527	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.7932	1	4094	4094		19.36	1.0356	1	1377600	+		35514	17017	23477	23486	40509	40509					0.09042343439477918
LVAQLDMFLTI	11	Unmodified	_LVAQLDMFLTI_					0	0	0			REV__ENSG00000109084|ENST00000226230|TMEM97	REV__ENSG00000109084|ENST00000226230|TMEM97	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2279357910156	3	421.905425	1262.69445	-0.59674	-0.00025177	-2.0884	-0.00088113	-2.6852	-0.0011329	421.9047462560114	58.673	0.16598	59.065	58.941	59.107	0.39209					5	3	2	0	0	0	0.17294	1	6148	6148		25.126	13.671	1	25473	+		35515	17746	23478	23487	40510	40510					0.0736064067082225
LVARALMV	8	Unmodified	_LVARALMV_					0	0	0		ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	ENSG00000253958|ENST00000519106|CLDN23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77349853515625	2	436.772948	871.531344	-1.6314	-0.00071254	3.3462	0.0014616	1.7149	0.00074901	436.7743489325011	26.574	0.4584	26.641	26.356	26.815	0.066877					33	21	2	0	0	0	0.81548	1	1025	1025		20.482	0	1	119400			35516	8869	23479	23488	40511	40511					0.0904392713028983
LVAREPPSK	9	Unmodified	_LVAREPPSK_					0	0	0			REV__ENSG00000156564|ENST00000338305|LRFN2	REV__ENSG00000156564|ENST00000338305|LRFN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.3227233886719	2	498.795466	995.57638	-0.6082	-0.00030337	1.176	0.00058657	0.56778	0.00028321	498.7949810627491	50.924	0.71627	50.959	50.765	51.481	0.034588					27	20	2	0	0	0	0.20789	1	4019	4019		20.947	0	1	103320	+		35517	20497	23480	23489	40512	40512					0.07841449197189831
LVARPVPGGF	10	Unmodified	_LVARPVPGGF_					0	0	0			REV__ENST00000394947.7_1_15:75722732-75743878:-|nuORF	REV__ENST00000394947.7_1_15:75722732-75743878:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.7994384765625	2	506.800552	1011.58655	-0.48557	-0.00024609	1.7036	0.00086341	1.2181	0.00061732	506.80138318270446	52.994	1.2868	53.041	52.134	53.421	0.047806					70	43	2	0	0	0	0.86305	1	4246	4246		31.955	2.8053	1	144880	+		35518	26094	23481	23490	40513	40513					0.0812205692243424
LVARRVRPI	9	Unmodified	_LVARRVRPI_					0	0	0			REV__ENST00000540645.5_1_9:116823569-116838999:-|nuORF	REV__ENST00000540645.5_1_9:116823569-116838999:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.3623657226562	2	540.361642	1078.70873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.776	1	44.825	44.325	45.325	0.048996								0	0	0	0.33676	1	3181	3181		18.324	0.95945	1		+		35519	17636	23482	23491	40514	40514					0.17252518724649235
LVARVIFAYSI	11	Unmodified	_LVARVIFAYSI_					0	0	0			REV__ENSG00000124657|ENST00000244623|OR2B6	REV__ENSG00000124657|ENST00000244623|OR2B6	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3282470703125	2	626.376623	1250.73869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.138	1	55.165	54.665	55.665	0.027142								0	0	0	0.56276	1	4935	4935		31.53	2.3598	1		+		35520	18603	23483	23492	40515	40515					0.12335412879338037
LVARVTVFLTF	11	Unmodified	_LVARVTVFLTF_					0	0	0		nc|ENSG00000211807|A0A087WT03|TRAV26-1	nc|ENSG00000211807|A0A087WT03|TRAV26-1	nc|ENSG00000211807|A0A087WT03|TRAV26-1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.8872680664062	2	633.384448	1264.75434	0.12605	7.984E-05	1.4207	0.00089988	1.5468	0.00097972	633.3850253113031	51.101	1.496	51.017	50.491	51.987	-0.084538					79	43	3	0	0	0	0.71394	1	4050	4050		32.751	21.115	1	224090			35521	15237	23484	23493	40516	40516					0.13255699396381715
LVASALRSAYM	11	Unmodified	_LVASALRSAYM_					0	0	0		ENSG00000163704|ENST00000412055|PRRT3;nc|ENSG00000163704|Q5FWE3-2|PRRT3	ENSG00000163704|ENST00000412055|PRRT3	ENSG00000163704|ENST00000412055|PRRT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	591.319580078125	2	591.320991	1180.62743	0.11826	6.9931E-05	-1.9672	-0.0011633	-1.8489	-0.0010933	591.3195203707345	66.847	0.7553	66.811	66.494	67.25	-0.035698					74	33	3	0	0	0	0.63176	1	6397	6397		40.778	1.972	1	235530			35522	5856	23485	23494	40517	40517					0.044340301797319626
LVASDKTNTF	10	Unmodified	_LVASDKTNTF_					0	0	0		nc|ENSG00000100364|Q6ICG6-3|KIAA0930;ENSG00000100364|ENST00000336156|KIAA0930;nc|ENSG00000100364|Q6ICG6-2|KIAA0930	nc|ENSG00000100364|Q6ICG6-3|KIAA0930	nc|ENSG00000100364|Q6ICG6-3|KIAA0930	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.3743286132812	2	548.287671	1094.56079	-0.79469	-0.00043572	1.9754	0.0010831	1.1807	0.00064739	548.289477799579	38.115	0.38057	38.442	38.141	38.522	0.32705					13	9	2	0	0	0	0.37624	1	3077	3077		27.882	0	1	57944			35523	1834	23486	23495	40518	40518					0.017291178894765835
LVASFALS	8	Unmodified	_LVASFALS_					0	0	0		ENST00000369393.7_1_6:90513083-90513194:-|nuORF	ENST00000369393.7_1_6:90513083-90513194:-|nuORF	ENST00000369393.7_1_6:90513083-90513194:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.2330322265625	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.86288	1	8350	8350		26.796	1.3459	1	4227600			35524	10617	23487	23496	40519	40519					0.04283612465758324
LVASLAYLRIF	11	Unmodified	_LVASLAYLRIF_					0	0	0			REV__ENST00000370303.4_1_1:93583948-93586110:+|nuORF	REV__ENST00000370303.4_1_1:93583948-93586110:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.38232421875	2	633.384448	1264.75434	0.12513	7.9253E-05	0.84708	0.00053653	0.97221	0.00061578	633.3847477666662	46.793	1.2244	47.716	47.519	48.744	0.92315					53	29	2	0	0	0	0.72374	1	4451	4451		8.2351	0	1	968610	+		35525	25651	23488	23497	40520	40520					0.13255699396358978
LVASPVLGL	9	Unmodified	_LVASPVLGL_					0	0	0			REV__ENSG00000162191|ENST00000301935|UBXN1	REV__ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7799987792969	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.76996	1	2327	2327		33.516	1.5607	1	3714500	+		35526	20800	23489	23498	40521	40521					0.10388447425293634
LVASPVLGL	9	Unmodified	_LVASPVLGL_					0	0	0			REV__ENSG00000162191|ENST00000301935|UBXN1	REV__ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.779052734375	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.7932	1	3014	3014		25.45	0	1	2766200	+		35527	20800	23489	23498	40522	40522					0.10388447425293634
LVASPVLGL	9	Unmodified	_LVASPVLGL_					0	0	0			REV__ENSG00000162191|ENST00000301935|UBXN1	REV__ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77972412109375	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.7932	1	3511	3511		26.796	0.10319	1	2750200	+		35528	20800	23489	23498	40523	40523					0.10388447425293634
LVASPVLGL	9	Unmodified	_LVASPVLGL_					0	0	0			REV__ENSG00000162191|ENST00000301935|UBXN1	REV__ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7803039550781	2	434.778754	867.542954	0.35961	0.00015635	3.3799	0.0014695	3.7395	0.0016259	434.78011136196255	36.165	2.4395	36.447	35.432	37.871	0.28173					211	60	5	0	0	0	0.7932	1	3005	3005		26.796	0	1	8602100	+		35529	20800	23489	23498	40524	40524					0.10388447425293634
LVASPVLGL	9	Unmodified	_LVASPVLGL_					0	0	0			REV__ENSG00000162191|ENST00000301935|UBXN1	REV__ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78076171875	2	434.778754	867.542954	1.7459	0.00075909	2.0876	0.00090764	3.8335	0.0016667	434.7795583562852	36.032	2.5113	36.473	35.233	37.744	0.44043					149	62	4	0	0	0	0.5393	1	2757	2757		50.025	0	1	9979000	+		35530	20800	23489	23498	40525	40525					0.10388447425293634
LVASPVLGL	9	Unmodified	_LVASPVLGL_					0	0	0			REV__ENSG00000162191|ENST00000301935|UBXN1	REV__ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7793273925781	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.7932	1	3776	3776		25.45	0	1	6824500	+		35531	20800	23489	23498	40526	40526					0.10388447425293634
LVASRIQDSA	10	Unmodified	_LVASRIQDSA_					0	0	0			REV__ENSG00000084754|ENST00000380649|HADHA	REV__ENSG00000084754|ENST00000380649|HADHA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2933349609375	2	530.293288	1058.57202	2.0317	0.0010774	-1.9029	-0.0010091	0.12876	6.828E-05	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.86587	1	9637	9637		29.17	0.020503	1	1811300	+		35532	16882	23490	23499	40527	40527					0.045079399836367884
LVASSKRVTT	10	Unmodified	_LVASSKRVTT_					0	0	0			REV__ENSG00000124818|ENST00000371211|OPN5	REV__ENSG00000124818|ENST00000371211|OPN5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.3184204101562	2	531.319306	1060.62406	1.2436	0.00066073	-1.246	-0.000662	-0.0023897	-1.2697E-06	531.3184005268905	94.973	2.3333	95.019	94.535	96.868	0.046173					183	54	5	0	0	0	0.86272	1	10081	10081		24.519	0.31644	1	4128600	+		35533	18617	23491	23500	40528	40528					0.0961710339736328
LVASSLYV	8	Unmodified	_LVASSLYV_					0	0	0		ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.2236022949219	2	426.247286	850.48002	2.1382	0.0009114	-2.0109	-0.00085714	0.1273	5.4262E-05	426.2463694069333	107.35	0.70785	107.45	107.16	107.87	0.10396					59	27	3	0	0	0	0.4196	1	13054	13054		4.6817	0.36548	1	403200			35534	12203	23492	23501	40529	40529					0.04879881637236849
LVASSLYV	8	Unmodified	_LVASSLYV_					0	0	0		ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	426.247286	850.48002	-0.18117	-7.7222E-05	0.53802	0.00022933	0.35685	0.00015211	426.2474224786391	107.7	0.41659	107.66	107.36	107.78	-0.042404	0.14166	0.0015615	NaN	4.6817	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144230			35535	12203	23492	23501							0.04879881637236849
LVASSLYV	8	Unmodified	_LVASSLYV_					0	0	0		ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	426.247286	850.48002	2.7172	0.0011582	-2.7691	-0.0011803	-0.051866	-2.2108E-05	426.2461460145886	107.57	0.46294	107.54	107.31	107.77	-0.031487	0.023219	-0.0012577	NaN	4.6817	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	169980			35536	12203	23492	23501							0.04879881637236849
LVASSLYV	8	Unmodified	_LVASSLYV_					0	0	0		ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	426.247286	850.48002	2.7447	0.0011699	-2.9618	-0.0012624	-0.21708	-9.2531E-05	426.24592383064646	107.49	0.51321	107.53	107.22	107.74	0.035622	0.0057804	-0.001422	NaN	4.6817	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124440			35537	12203	23492	23501							0.04879881637236849
LVASSLYV	8	Unmodified	_LVASSLYV_					0	0	0		ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	426.247286	850.48002	-1.6797	-0.00071595	1.5724	0.00067025	-0.10723	-4.5708E-05	426.2479083785414	107.28	0.61382	107.42	107.2	107.81	0.13866	-0.0999	0.0024434	NaN	4.6817	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	250380			35538	12203	23492	23501							0.04879881637236849
LVASSLYV	8	Unmodified	_LVASSLYV_					0	0	0		ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	426.247286	850.48002	0.73404	0.00031288	-1.8591	-0.00079244	-1.1251	-0.00047955	426.24697196182564	107.44	0.54272	107.53	107.3	107.84	0.091255	0.01213	-0.000482	NaN	4.6817	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199300			35539	12203	23492	23501							0.04879881637236849
LVASSLYV	8	Unmodified	_LVASSLYV_					0	0	0		ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	426.247286	850.48002	-1.8584	-0.00079212	1.7935	0.00076448	-0.064853	-2.7643E-05	426.24797928268106	107.49	0.50107	107.53	107.29	107.79	0.036118	0.0076287	0.0026318	NaN	4.6817	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	239240			35540	12203	23492	23501							0.04879881637236849
LVASSLYV	8	Unmodified	_LVASSLYV_					0	0	0		ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	ENST00000469535.5_1_1:207940917-207941046:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	426.247286	850.48002	4.809	0.0020498	-4.8407	-0.0020633	-0.031668	-1.3498E-05	426.24525570177093	107.38	0.69803	107.5	107.22	107.91	0.11716	-0.023618	-0.0030238	NaN	4.6817	54	28	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	417830			35541	12203	23492	23501							0.04879881637236849
LVATFIVK	8	Unmodified	_LVATFIVK_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	445.6359558105469	2	445.789121	889.56369	-1.3368	-0.00059594	3.7646	0.0016782	2.4278	0.0010823	445.79098766822364	39.679	0.67748	39.635	39.287	39.965	-0.043694					23	15	2	0	0	0	0.4196	1	2871	2871		12.207	4.5166	1	30145			35542	1504	23493	23502	40530	40530					0.11449037804948148
LVATLVLLD	9	Unmodified	_LVATLVLLD_					0	0	0		ENST00000468862.5_1_3:159706816-159710915:+|nuORF;ENST00000496308.1_1_3:159706816-159711351:+|nuORF;ENSG00000168811|ENST00000699704|IL12A	ENST00000468862.5_1_3:159706816-159710915:+|nuORF	ENST00000468862.5_1_3:159706816-159710915:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8049011230469	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.7932	1	2843	2843		17.365	1.7232	1	371600			35543	6439	23494	23503	40531	40531					0.11580985768239316
LVAVGNSF	8	Unmodified	_LVAVGNSF_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.72479248046875	2	403.723978	805.433404	0.40958	0.00016536	-0.076812	-3.1011E-05	0.33277	0.00013435	403.72380872064997	64.881	1.7093	65.005	63.854	65.563	0.12396					144	69	3	0	0	0	0.88915	1	5799	5799		35.201	1.6851	1	1091100	+		35544	20437;29946	23495	23504	40532	40532					0.02290441805962473
LVAVLAKSFN	10	Unmodified	_LVAVLAKSFN_					0	0	0			REV__ENSG00000187775|ENST00000389840|DNAH17;REV__nc|ENSG00000187775|Q9UFH2-4|DNAH17	REV__ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.3189086914062	2	531.321317	1060.62808	-1.5129	-0.00080386	-2.153	-0.0011439	-3.6659	-0.0019478	531.3198552399973	94.964	2.533	95.167	94.65	97.183	0.20242					171	59	5	0	0	0	0.86272	1	9677	9677		24.519	1.4767	1	2353400	+		35545	22946;29169	23496	23505	40533	40533					0.10019192891104467
LVAVLGVVAA	10	Unmodified	_LVAVLGVVAA_					0	0	0			REV__ENSG00000107566|ENST00000421367|ERLIN1	REV__ENSG00000107566|ENST00000421367|ERLIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3011169433594	2	456.299853	910.585153	-0.16313	-7.4434E-05	2.0671	0.00094322	1.904	0.00086878	456.30063437425633	43.131	1.7393	43.081	42.268	44.008	-0.050308					99	45	4	0	0	0	0.86786	1	2973	2973		26.796	3.7536	1	855890	+		35546	17663	23497	23506	40534	40534					0.1262842283366581
LVAVLGVVAA	10	Unmodified	_LVAVLGVVAA_					0	0	0			REV__ENSG00000107566|ENST00000421367|ERLIN1	REV__ENSG00000107566|ENST00000421367|ERLIN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.30267333984375	2	456.299853	910.585153	-2.7466	-0.0012533	3.6008	0.001643	0.85414	0.00038975	456.30134035320407	41.652	1.2821	42.066	41.223	42.505	0.4139					70	34	3	0	0	0	0.85976	1	3693	3693		35.201	4.6971	1	3003600	+		35547	17663	23497	23506	40535	40535					0.1262842283366581
LVAVLLDSV	9	Unmodified	_LVAVLLDSV_					0	0	0			REV__ENSG00000184845|ENST00000393752|DRD1	REV__ENSG00000184845|ENST00000393752|DRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7906188964844	2	464.789318	927.564084	-0.5794	-0.0002693	3.5758	0.001662	2.9964	0.0013927	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.76996	1	2283	2283		33.516	1.5607	1	409180	+		35548	22705	23498	23507	40536	40536					0.0974041273415196
LVAVLLDSV	9	Unmodified	_LVAVLLDSV_					0	0	0			REV__ENSG00000184845|ENST00000393752|DRD1	REV__ENSG00000184845|ENST00000393752|DRD1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7904357910156	2	464.789318	927.564084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.311	1	36.251	35.751	36.751	-0.060333								0	0	0	0.33301	1	1988	1988		19.36	0	1		+		35549	22705	23498	23507	40537	40537					0.0974041273415196
LVAVLLDSV	9	Unmodified	_LVAVLLDSV_					0	0	0			REV__ENSG00000184845|ENST00000393752|DRD1	REV__ENSG00000184845|ENST00000393752|DRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.7908020019531	2	464.789318	927.564084	0.89139	0.00041431	1.9223	0.00089347	2.8137	0.0013078	464.79003742399567	33.921	1.5866	34.225	33.702	35.289	0.30494					91	38	3	0	0	0	0.77546	1	2504	2504		31.955	0	1	1052300	+		35550	22705	23498	23507	40538	40538					0.0974041273415196
LVAVLMLCSL	10	Unmodified	_LVAVLMLCSL_					0	0	0			REV__ENSG00000275718|ENST00000617897|CCL15	REV__ENSG00000275718|ENST00000617897|CCL15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.3087158203125	2	531.308506	1060.60246	-0.95465	-0.00050721	1.1005	0.00058471	0.14586	7.7497E-05	531.3089149242114	37.247	0.75082	37.258	36.973	37.724	0.011173					37	16	3	0	0	0	0.53935	1	2464	2464		53.351	0	1	208570	+		35551	24013	23499	23508	40539	40539					0.0745825905280526
LVAVTLTVP	9	Unmodified	_LVAVTLTVP_					0	0	0		ENSG00000139209|ENST00000266579|SLC38A4	ENSG00000139209|ENST00000266579|SLC38A4	ENSG00000139209|ENST00000266579|SLC38A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7928771972656	2	456.791861	911.569169	-2.1986	-0.0010043	3.4286	0.0015662	1.23	0.00056186	456.7933193778514	39.928	2.2	40.296	39.048	41.248	0.36797					193	55	5	0	0	0	0.67235	1	3355	3355		42.474	8.9589	1	10973000			35552	4355	23500	23509	40540	40540					0.10984716596749422
LVAVVGAALV	10	Unmodified	_LVAVVGAALV_					0	0	0		nc|ENSG00000188833|Q5MY95-2|ENTPD8;ENSG00000188833|ENST00000371506|ENTPD8	nc|ENSG00000188833|Q5MY95-2|ENTPD8	nc|ENSG00000188833|Q5MY95-2|ENTPD8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3011474609375	2	456.299853	910.585153	-0.76777	-0.00035033	3.2946	0.0015033	2.5268	0.001153	456.30128506086476	48.129	1.2211	48.104	47.704	48.926	-0.025116					68	30	3	0	0	0	0.86786	1	4125	4125		26.796	0	1	255900			35553	7966	23501	23510	40541	40541					0.1262842283366581
LVAVVGLGP	9	Unmodified	_LVAVVGLGP_					0	0	0			REV__ENST00000569969.5_2_16:28986191-28992937:+|nuORF	REV__ENST00000569969.5_2_16:28986191-28992937:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.26611328125	2	412.765646	823.516739	-0.024773	-1.0226E-05	2.7576	0.0011383	2.7329	0.001128	412.7671753724154	37.892	4.8812	37.868	35.596	40.477	-0.023979					267	113	4	0	0	0	0.7932	1	2430	2430		21.702	0	1	1546000	+		35554	21593	23502	23511	40542	40542					0.09792178253826478
LVAVVGLGP	9	Unmodified	_LVAVVGLGP_					0	0	0			REV__ENST00000569969.5_2_16:28986191-28992937:+|nuORF	REV__ENST00000569969.5_2_16:28986191-28992937:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76678466796875	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.794	1	48.794	48.294	49.294	0.00016785								0	0	0	0.32542	1	4079	4079		21.702	0	1		+		35555	21593	23502	23511	40543	40543					0.09792178253826478
LVAVVGLGP	9	Unmodified	_LVAVVGLGP_					0	0	0			REV__ENST00000569969.5_2_16:28986191-28992937:+|nuORF	REV__ENST00000569969.5_2_16:28986191-28992937:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7670593261719	2	412.765646	823.516739	1.2585	0.00051947	2.4286	0.0010024	3.6871	0.0015219	412.7665201070099	37.01	2.3211	37.292	35.703	38.024	0.28173					152	57	4	0	0	0	0.78292	1	2846	2846		29.842	0	1	3102100	+		35556	21593	23502	23511	40544	40544					0.09792178253826478
LVCELVLLM	9	Unmodified	_LVCELVLLM_					0	0	0			REV__nc|ENSG00000121210|A2VDJ0-2|TMEM131L	REV__nc|ENSG00000121210|A2VDJ0-2|TMEM131L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7935180664062	2	516.795232	1031.57591	0.70992	0.00036688	-4.1511	-0.0021453	-3.4412	-0.0017784	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.77546	1	8710	8710		31.955	0.42505	1	842420	+		35557	29814	23503	23512	40545	40545					0.061385701614653954
LVCGVRLL	8	Unmodified	_LVCGVRLL_					0	0	0			REV__ENSG00000128165|ENST00000395737|ADM2	REV__ENSG00000128165|ENST00000395737|ADM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7738037109375	2	436.772948	871.531344	0.37686	0.0001646	1.37	0.00059837	1.7468	0.00076298	436.77341022193644	26.318	0.4133	26.346	26.113	26.526	0.02817					33	18	2	0	0	0	0.81724	1	1008	1008		14.664	0.88877	1	141420	+		35558	18763	23504	23513	40546	40546					0.0904392713028983
LVCKAGIIAS	10	Unmodified	_LVCKAGIIAS_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;ENST00000594885.1_1_19:3984132-3985378:-|nuORF	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7906494140625	2	487.788795	973.563038	0.64552	0.00031488	3.0925	0.0015085	3.738	0.0018234	487.7902403356112	84.29	3.8463	84.438	83.273	87.119	0.14794					288	89	4	0	0	0	0.86218	1	8188	8188		32.812	2.9709	1	1929300			35559	6314	23505	23514	40547	40547					0.07519875093578321
LVCLLLFPV	9	Carbamidomethyl (C)	_LVC(Carbamidomethyl (C))LLLFPV_	LVC(1)LLLFPV		LVC(49)LLLFPV		0	1	0			REV__nc|ENSG00000008277|Q9P0K1-4|ADAM22	REV__nc|ENSG00000008277|Q9P0K1-4|ADAM22	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.325927734375	2	537.325014	1072.63547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.62	1	104.85	104.35	105.35	0.2268								0	0	0	0.36184	1	12782	12782		49.211	17.681	1		+		35560	16131	23506	23515	40548	40548	215				0.10206209167154157
LVCVGLLPRG	10	Unmodified	_LVCVGLLPRG_					0	0	0			REV__ENST00000244769.8_1_6:16303126-16303444:-|nuORF	REV__ENST00000244769.8_1_6:16303126-16303444:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.809814453125	2	513.810062	1025.60557	0.36713	0.00018864	-2.2716	-0.0011671	-1.9044	-0.00097851	513.8088609518841	50.93	1.0953	50.98	50.541	51.637	0.049896					79	32	3	0	0	0	0.84112	1	4017	4017		37.159	5.2042	1	394250	+		35561	24246	23507	23516	40549	40549					0.09379270221802471
LVCVKHFR	8	Unmodified	_LVCVKHFR_					0	0	0			REV__ENST00000498166.5_1_1:170502721-170505475:+|nuORF	REV__ENST00000498166.5_1_1:170502721-170505475:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904052734375	2	501.289297	1000.56404	-0.064759	-3.2463E-05	2.3828	0.0011945	2.318	0.001162	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.86288	1	8955	8955		26.796	0.10319	1	9565500	+		35562	27783	23508	23517	40550	40550					0.06378134253145618
LVCVKHFR	8	Unmodified	_LVCVKHFR_					0	0	0			REV__ENST00000498166.5_1_1:170502721-170505475:+|nuORF	REV__ENST00000498166.5_1_1:170502721-170505475:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2900085449219	2	501.289297	1000.56404	-1.5697	-0.00078686	3.8607	0.0019353	2.2911	0.0011485	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.89962	1	8911	8911		38.806	7.2763	1	9242300	+		35563	27783	23508	23517	40551	40551					0.06378134253145618
LVCVKHFR	8	Unmodified	_LVCVKHFR_					0	0	0			REV__ENST00000498166.5_1_1:170502721-170505475:+|nuORF	REV__ENST00000498166.5_1_1:170502721-170505475:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2901306152344	2	501.289297	1000.56404	-0.45424	-0.0002277	2.6424	0.0013246	2.1882	0.0010969	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.91005	1	9990	9990		42.474	0.078325	1	9727400	+		35564	27783	23508	23517	40552	40552					0.06378134253145618
LVCVLVLSRC	10	Carbamidomethyl (C)	_LVCVLVLSRC(Carbamidomethyl (C))_	LVCVLVLSRC(1)		LVC(-35)VLVLSRC(35)		0	1	0			REV__ENSG00000180694|ENST00000458549|TMEM64	REV__ENSG00000180694|ENST00000458549|TMEM64	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.322998046875	2	581.327762	1160.64097	-1.3413	-0.00077973	-4.3991	-0.0025573	-5.7404	-0.0033371	581.3249113201389	63.782	0.71261	63.809	63.43	64.143	0.027138					57	23	3	0	0	0	0.4892	1	5991	5991		56.721	10.769	2	395880	+		35565	22410	23509	23518	40553	40553	272				0.06707564687303602
LVDASILMY	9	Oxidation (M)	_LVDASILM(Oxidation (M))Y_		LVDASILM(1)Y		LVDASILM(58)Y	0	0	1			REV__ENSG00000134955|ENST00000403796|SLC37A2	REV__ENSG00000134955|ENST00000403796|SLC37A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.7681274414062	2	520.770268	1039.52598	0.081423	4.2403E-05	-3.6804	-0.0019166	-3.5989	-0.0018742	520.7681061740968	83.04	1.3308	83.471	82.795	84.126	0.43108					78	31	4	0	0	0	0.39977	1	9619	9619		57.811	6.4758	1	1676400	+		35566	19178	23510	23519	40554	40554		282			0.00780158757152094
LVDKKARKASM	11	Unmodified	_LVDKKARKASM_					0	0	0			REV__ENSG00000135315|ENST00000403245|CEP162	REV__ENSG00000135315|ENST00000403245|CEP162	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	623.8713989257812	2	623.86864	1245.72273	-0.25925	-0.00016174	3.0799	0.0019214	2.8206	0.0017597	623.8704556455313	104.73	1.8693	104.71	104.28	106.15	-0.014809					121	44	4	0	0	0	0.75544	1	11316	11316		20.837	0.80668	1	1315900	+		35567	19208	23511	23520	40555	40555					0.10969383370775176
LVDKKARKASM	11	Unmodified	_LVDKKARKASM_					0	0	0			REV__ENSG00000135315|ENST00000403245|CEP162	REV__ENSG00000135315|ENST00000403245|CEP162	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	623.87109375	2	623.86864	1245.72273	-1.2116	-0.00075585	4.0024	0.002497	2.7909	0.0017411	623.8710403744353	104.48	2.0404	104.58	104.1	106.14	0.093857					153	50	5	0	0	0	0.74763	1	11080	11080		22.58	3.4761	1	2931600	+		35568	19208	23511	23520	40556	40556					0.10969383370775176
LVDLKIPRR	9	Unmodified	_LVDLKIPRR_					0	0	0		nc|ENSG00000150676|Q8IWF9-3|CCDC83;ENSG00000150676|ENST00000342404|CCDC83	nc|ENSG00000150676|Q8IWF9-3|CCDC83	nc|ENSG00000150676|Q8IWF9-3|CCDC83	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.3638305664062	2	555.361308	1108.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.421	1	16.397	15.897	16.897	-0.024035								0	0	0	0.30778	1	143	143		27.882	1.1893	1				35569	5079	23512	23521	40557	40557					0.15805679284949292
LVDPCGLH	8	Unmodified	_LVDPCGLH_					0	0	0			REV__nc|ENSG00000180764|A2A3N6|PIPSL	REV__nc|ENSG00000180764|A2A3N6|PIPSL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3024597167969	2	427.215463	852.416374	0.20451	8.7368E-05	3.967	0.0016948	4.1715	0.0017821	427.217047018209	80.645	1.9179	81.172	80.062	81.98	0.52676					71	45	2	0	0	0	0.4196	1	9289	9289		28.254	0	1	176140	+		35570	27418	23513	23522	40558	40558					-0.015738020714934464
LVDRAQQLL	9	Unmodified	_LVDRAQQLL_					0	0	0		ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7842407226562	2	528.314023	1054.61349	1.5812	0.00083539	-1.2683	-0.00067008	0.3129	0.00016531	528.3133952861483	98.137	1.0269	98.514	98.081	99.108	0.37679					48	24	2	0	0	0	0.20789	1	11816	11816		20.947	0	1	357970			35571	3668	23514	23523	40559	40559					0.08837120742964544
LVDRLEVVNKQ	11	Unmodified	_LVDRLEVVNKQ_					0	0	0		ENST00000436447.5_1_16:90046667-90060229:+|nuORF;ENST00000437774.5_1_16:90046667-90055262:+|nuORF;ENST00000421164.5_1_16:90046667-90051085:+|nuORF;ENST00000557444.5_1_16:90046667-90055099:+|nuORF;ENST00000418696.5_2_16:90046667-90060229:+|nuORF	ENST00000436447.5_1_16:90046667-90060229:+|nuORF	ENST00000436447.5_1_16:90046667-90060229:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2613220214844	3	438.257626	1311.75105	0.21129	9.2599E-05	0.10345	4.5337E-05	0.31474	0.00013794	438.2576083423229	29.948	1.2574	29.973	29.652	30.909	0.025013					91	35	4	0	0	0	0.71803	1	1603	1603		28.577	3.4507	1	433100			35572	11721	23515	23524	40560	40560					0.10764404551696316
LVDRYIRPD	9	Unmodified	_LVDRYIRPD_					0	0	0			REV__ENSG00000181418|ENST00000421952|DDN	REV__ENSG00000181418|ENST00000421952|DDN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.8170776367188	2	573.81693	1145.61931	-0.97824	-0.00056133	0.98096	0.00056289	0.0027219	1.5618E-06	573.8173526774345	36.242	1.264	36.223	35.602	36.866	-0.018673					63	27	4	0	0	0	0.76764	1	2332	2332		34.173	1.3601	1	601960	+		35573	22459	23516	23525	40561	40561					0.052322192545943835
LVDVAVPRRQL	11	Unmodified	_LVDVAVPRRQL_					0	0	0			REV__ENSG00000185897|ENST00000327809|FFAR3	REV__ENSG00000185897|ENST00000327809|FFAR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.3837280273438	2	633.388054	1264.76155	-0.047261	-2.9934E-05	-4.1965	-0.002658	-4.2437	-0.0026879	633.3851991491786	51.452	1.7221	51.45	50.349	52.071	-0.0020447					76	46	2	0	0	0	0.68431	1	4339	4339		24.519	0	1	76796	+		35574	22801	23517	23526	40562	40562					0.13976431996798055
LVDVCVCVC	9	Unmodified	_LVDVCVCVC_					0	0	0			REV__ENST00000359867.7_2_22:38687065-38687464:-|nuORF	REV__ENST00000359867.7_2_22:38687065-38687464:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	476.7206726074219	2	476.718667	951.422781	1.2436	0.00059287	3.3885	0.0016154	4.6322	0.0022082	476.72013818854134	89.073	0.91069	89.523	89.202	90.113	0.45058					47	21	3	0	0	0	0.76402	1	10528	10528		35.201	1.6851	1	743070	+		35575	25464	23518	23527	40563	40563					-0.05487368226647504
LVDVTSHKRKI	11	Unmodified	_LVDVTSHKRKI_					0	0	0		L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|19|2|sense	L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|19|2|sense	L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|19|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3920288085938	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75921	1	12747	12747		19.997	1.6724	1	2297700			35576	14523	23519	23528	40564	40564					0.13652414651232903
LVEAALAVP	9	Unmodified	_LVEAALAVP_					0	0	0		ENST00000586733.1_1_17:73754139-73754584:-|nuORF;ENSG00000108479|ENST00000588479|GALK1	ENST00000586733.1_1_17:73754139-73754584:-|nuORF	ENST00000586733.1_1_17:73754139-73754584:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7682189941406	2	441.768386	881.522219	1.8457	0.00081536	-2.5489	-0.001126	-0.70319	-0.00031065	441.7671929454709	107.13	0.97263	107.16	106.81	107.78	0.035622					54	22	3	0	0	0	0.7932	1	11755	11755		24.203	4.8428	1	1993200			35577	2409	23520	23529	40565	40565					0.07671857045602337
LVEEFRKTLC	10	Unmodified	_LVEEFRKTLC_					0	0	0		nc|ENSG00000140455|Q9Y6I4-2|USP3;ENSG00000140455|ENST00000380324|USP3	nc|ENSG00000140455|Q9Y6I4-2|USP3	nc|ENSG00000140455|Q9Y6I4-2|USP3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8341064453125	2	619.334098	1236.65364	-0.71212	-0.00044104	-1.8371	-0.0011378	-2.5492	-0.0015788	619.3328577487828	60.41	0.6367	60.41	60.144	60.781	0					65	24	4	0	0	0	0.8545	1	5277	5277		36.447	0	1	426150			35578	4433	23521	23530	40566	40566					0.04478299351217174
LVEEIGWSY	9	Unmodified	_LVEEIGWSY_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1;nc|ENSG00000106278|P23471-3|PTPRZ1;ENST00000471837.1_1_7:121513505-121606995:+|nuORF	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.2703857421875	2	548.27149	1094.52843	0.44692	0.00024503	-3.6847	-0.0020202	-3.2378	-0.0017752	548.2692278334891	56.848	0.57249	56.819	56.583	57.156	-0.028664					41	18	3	0	0	0	0.5393	1	5228	5228		50.025	4.0523	1	503700			35579	2287	23522	23531	40567	40567					-0.015056695135172049
LVEEKLDRA	9	Unmodified	_LVEEKLDRA_					0	0	0		ENST00000368528.3_1_3:27674554-27675208:+|nuORF	ENST00000368528.3_1_3:27674554-27675208:+|nuORF	ENST00000368528.3_1_3:27674554-27675208:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.2529296875	2	536.803488	1071.59242	-2.0452	-0.0010979	-1.3687	-0.00073472	-3.4139	-0.0018326	536.8022719909019	43.508	0.15939	44.282	44.183	44.343	0.7738					6	3	2	0	0	0	0.20789	1	3957	3957		34.173	12.213	1	143970		+	35580	10598	23523	23532	40568	40568					0.05949110643427957
LVEEKLDRA	9	Unmodified	_LVEEKLDRA_					0	0	0		ENST00000368528.3_1_3:27674554-27675208:+|nuORF	ENST00000368528.3_1_3:27674554-27675208:+|nuORF	ENST00000368528.3_1_3:27674554-27675208:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	536.803488	1071.59242	-0.83779	-0.00044973	-4.6737	-0.0025089	-5.5115	-0.0029586	536.8017925419805	43.688	0.27785	44.139	44.003	44.281	0.45025	-0.07173	-0.001481	NaN	34.173	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	216360		+	35581	10598	23523	23532							0.05949110643427957
LVEEPRSKL	9	Unmodified	_LVEEPRSKL_					0	0	0			REV__nc|ENSG00000186231|Q96NJ5-3|KLHL32	REV__nc|ENSG00000186231|Q96NJ5-3|KLHL32	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.1656494140625	2	535.813856	1069.61316	-0.38772	-0.00020774	2.4082	0.0012903	2.0205	0.0010826	535.8150512488198	21.879	0.51993	21.25	21.013	21.533	-0.62835					22	12	3	0	0	0	0.78058	1	809	809		30.504	4.4403	1	61037	+		35582	22838	23524	23533	40569	40569					0.08113701023103204
LVEEPRSKL	9	Unmodified	_LVEEPRSKL_					0	0	0			REV__nc|ENSG00000186231|Q96NJ5-3|KLHL32	REV__nc|ENSG00000186231|Q96NJ5-3|KLHL32	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	535.813856	1069.61316	0.75851	0.00040642	1.3796	0.0007392	2.1381	0.0011456	535.8140719499999	21.699	0.50195	21.255	20.992	21.494	-0.44324	0.0024382	-0.00054473	NaN	30.504	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47090	+		35583	22838	23524	23533							0.08113701023103204
LVEEVERRVL	10	Unmodified	_LVEEVERRVL_					0	0	0		ENST00000587439.5_1_19:36108795-36110661:+|nuORF;ENST00000585968.5_1_19:36103696-36110661:+|nuORF;ENSG00000249115|ENST00000203166|HAUS5	ENST00000587439.5_1_19:36108795-36110661:+|nuORF	ENST00000587439.5_1_19:36108795-36110661:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.5783386230469	3	414.578588	1240.71394	1.0071	0.00041753	-0.034989	-1.4506E-05	0.97214	0.00040303	414.5782673213174	28.214	0.75545	27.965	27.637	28.392	-0.24941					34	18	3	0	0	0	0.86106	1	1723	1723		33.922	1.1711	1	181080			35584	8835	23525	23534	40570	40570					0.10320733005937655
LVEKGETDLIQ	11	Unmodified	_LVEKGETDLIQ_					0	0	0		ENSG00000138095|ENST00000260665|LRPPRC	ENSG00000138095|ENST00000260665|LRPPRC	ENSG00000138095|ENST00000260665|LRPPRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.5608215332031	3	415.562604	1243.66598	0.13968	5.8046E-05	-4.2358	-0.0017602	-4.0961	-0.0017022	415.5606926741143	30.436	0.52406	30.439	30.229	30.753	0.0037212					20	11	2	0	0	0	0.66009	1	2021	2021		37.508	4.4688	1	260730			35585	4269	23526	23535	40571	40571					0.053896142952453374
LVEKGETDLIQ	11	Unmodified	_LVEKGETDLIQ_					0	0	0		ENSG00000138095|ENST00000260665|LRPPRC	ENSG00000138095|ENST00000260665|LRPPRC	ENSG00000138095|ENST00000260665|LRPPRC	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	415.562604	1243.66598	-0.38095	-0.00015831	-3.0543	-0.0012692	-3.4352	-0.0014275	415.56094986806835	30.33	0.6639	30.359	30.096	30.76	0.028618	-0.040348	0.0011705	NaN	37.508	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	213760			35586	4269	23526	23535							0.053896142952453374
LVELEVLPA	9	Unmodified	_LVELEVLPA_					0	0	0		ENSG00000173546|ENST00000308508|CSPG4	ENSG00000173546|ENST00000308508|CSPG4	ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79608154296875	2	491.794601	981.574648	-0.71044	-0.00034939	3.0101	0.0014803	2.2996	0.001131	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.77546	1	4105	4105		31.955	1.4512	1	571510			35587	6866	23527	23536	40572	40572					0.08312395388566074
LVELLSKAFES	11	Unmodified	_LVELLSKAFES_					0	0	0		ENST00000558036.5_1_15:101821931-101826098:-|nuORF	ENST00000558036.5_1_15:101821931-101826098:-|nuORF	ENST00000558036.5_1_15:101821931-101826098:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.3457641601562	2	618.347729	1234.6809	-0.32375	-0.00020019	-2.5779	-0.001594	-2.9016	-0.0017942	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.62614	1	10325	10325		41.427	3.6151	1	926440			35588	13784	23528	23537	40573	40573					0.07295106163246601
LVELVVCAN	9	Carbamidomethyl (C)	_LVELVVC(Carbamidomethyl (C))AN_	LVELVVC(1)AN		LVELVVC(51)AN		0	1	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7784118652344	2	508.775885	1015.53722	4.1939	0.0021338	-1.5195	-0.00077306	2.6745	0.0013607	508.7748013838143	103.77	1.9312	104.03	103.75	105.69	0.26524					62	46	2	0	0	0	0.51307	1	12667	12667		51.335	8.4712	1	158630			35589	688	23529	23538	40574	40574	6				0.03006980851307617
LVELVVCAN	9	Carbamidomethyl (C)	_LVELVVC(Carbamidomethyl (C))AN_					0	1	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	508.775885	1015.53722	1.8486	0.00094054	1.0657	0.00054222	2.9144	0.0014828	508.776077925462	103.79	1.0554	103.98	103.72	104.78	0.18888	-0.025021	0.0016267	NaN	51.335	38	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125010			35590	688	23529	23538			6				0.03006980851307617
LVENFLVL	8	Unmodified	_LVENFLVL_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.78265380859375	2	473.784036	945.553519	0.8561	0.00040561	-3.1672	-0.0015006	-2.3111	-0.001095	473.78229812116575	21.435	0.72224	21.503	21.23	21.953	0.068251					45	22	3	0	0	0	0.88915	1	596	596		35.201	0	1	91763	+		35591	23196	23530	23539	40575	40575					0.07856430079709753
LVEPVPVRLEP	11	Unmodified	_LVEPVPVRLEP_					0	0	0			REV__ENSG00000164880|ENST00000404767|INTS1	REV__ENSG00000164880|ENST00000404767|INTS1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.3676147460938	2	624.371538	1246.72852	-0.063393	-3.958E-05	-1.7175	-0.0010723	-1.7809	-0.0011119	624.8723580953412	103.7	0.7278	103.7	103.47	104.2	0					26	17	2	0	0	0	0.17472	1	10631	10631		18.262	0	1	657170	+		35592	21124	23531	23540	40576	40576					0.11502805154077578
LVEQHGSDI	9	Unmodified	_LVEQHGSDI_					0	0	0		ENSG00000067704|ENST00000366922|IARS2;ENST00000490891.1_1_1:220287805-220307963:+|nuORF	ENSG00000067704|ENST00000366922|IARS2	ENSG00000067704|ENST00000366922|IARS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.25079345703125	2	499.251089	996.487624	-0.12384	-6.1825E-05	-0.2059	-0.0001028	-0.32973	-0.00016462	499.25083033219846	54.708	0.54705	55.115	54.781	55.328	0.40663					30	12	4	0	0	0	0.38563	1	5564	5564		58.782	0	1	654490			35593	1187	23532	23541	40577	40577					-0.01076010833151031
LVETPKVD	8	Unmodified	_LVETPKVD_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.75482177734375	2	450.755475	899.496398	0.64847	0.0002923	-3.528	-0.0015903	-2.8795	-0.001298	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.85277	1	7927	7927		25.45	0	1	162850			35594	2287	23533	23542	40578	40578					0.042629628033296285
LVEVLLGAL	9	Unmodified	_LVEVLLGAL_					0	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8002624511719	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3394	3394		13.775	0.81615	1	1516700			35595	8803	23534	23543	40579	40579					0.11905003113804469
LVEVLLGAL	9	Unmodified	_LVEVLLGAL_					0	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7997131347656	2	463.799686	925.584819	-1.0055	-0.00046636	2.8419	0.0013181	1.8363	0.00085169	463.8008639126462	44.569	0.72293	45.032	44.662	45.385	0.46313					32	17	2	0	0	0	0.7932	1	4097	4097		26.796	7.4361	1	773120			35596	8803	23534	23543	40580	40580					0.11905003113804469
LVEVLLGAL	9	Unmodified	_LVEVLLGAL_					0	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	463.799686	925.584819	-1.4346	-0.00066538	3.4205	0.0015864	1.9859	0.00092105	463.80097862303376	44.32	0.80461	45.164	44.862	45.667	0.84438	0.066185	0.00030774	NaN	26.796	45	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	998680			35597	8803	23534	23543							0.11905003113804469
LVEVMHPSF	9	Unmodified	_LVEVMHPSF_					0	0	0		ENSG00000173137|ENST00000308860|ADCK5;ENST00000529654.5_1_8:145615920-145616956:+|nuORF	ENSG00000173137|ENST00000308860|ADCK5	ENSG00000173137|ENST00000308860|ADCK5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.7711181640625	2	529.770603	1057.52665	-0.11856	-6.2808E-05	0.40034	0.00021209	0.28178	0.00014928	529.7705146887486	67.089	0.97255	67.222	66.897	67.869	0.13326					84	40	3	0	0	0	0.39977	1	6010	6010		57.811	1.0902	1	711500			35598	6831	23535	23544	40581	40581					0.0001899819685604598
LVEVVGNGTY	10	Unmodified	_LVEVVGNGTY_					0	0	0		nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;ENSG00000071054|ENST00000324219|MAP4K4;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;nc|ENSG00000141503|Q8N4C8-5|MINK1;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;ENSG00000141503|ENST00000355280|MINK1	nc|ENSG00000071054|O95819-4|MAP4K4	nc|ENSG00000071054|O95819-4|MAP4K4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.360595703125	2	525.776939	1049.53933	0.98916	0.00052008	2.3317	0.0012259	3.3208	0.001746	525.7779596054783	36.951	1.3484	37.233	36.638	37.987	0.28173					41	32	2	0	0	0	0.37624	1	2860	2860		47.657	1.7054	1	113540			35599	14775	23536	23545	40582	40582					0.01653732860791024
LVFALALYL	9	Unmodified	_LVFALALYL_					0	0	0		ENST00000552099.5_1_12:49165333-49167571:-|nuORF;ENST00000547260.5_1_12:49165333-49167887:-|nuORF;nc|ENSG00000174233|O43306-2|ADCY6;ENSG00000174233|ENST00000357869|ADCY6	ENST00000552099.5_1_12:49165333-49167571:-|nuORF	ENST00000552099.5_1_12:49165333-49167571:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.270263671875	2	511.817879	1021.6212	4.821	0.0024675	0.82737	0.00042346	5.6484	0.0028909	511.81835696750153	106.63	0.49855	106.78	106.57	107.07	0.14929					37	20	2	0	0	0	0.20789	1	13055	13055		21.702	3.3779	1	185590			35600	6919	23537	23546	40583	40583					0.1112588001047925
LVFASLTG	8	Unmodified	_LVFASLTG_					0	0	0		nc|ENSG00000048707|Q5THJ4-2|VPS13D;ENSG00000048707|ENST00000620676|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.23291015625	2	404.234179	806.453805	-1.8251	-0.00073778	-1.1309	-0.00045714	-2.956	-0.0011949	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.9159	1	8317	8317		44.531	7.5026	1	3315300			35601	977	23538	23547	40584	40584					0.042836124657469554
LVFFSVVF	8	Unmodified	_LVFFSVVF_					0	0	0			REV__ENSG00000205495|ENST00000380370|OR52J3	REV__ENSG00000205495|ENST00000380370|OR52J3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2779541015625	2	479.275847	956.537141	-0.83282	-0.00039915	4.0167	0.0019251	3.1839	0.001526	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.88915	2	8551	8182;8551		37.028	8.4046	1	7438100	+		35602	23560	23539	23548	40585;40586	40586					0.05713348913616301
LVFFSVVF	8	Unmodified	_LVFFSVVF_					0	0	0			REV__ENSG00000205495|ENST00000380370|OR52J3	REV__ENSG00000205495|ENST00000380370|OR52J3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2780456542969	2	479.275847	956.537141	0.63867	0.0003061	2.5833	0.0012381	3.222	0.0015442	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.89457	2	8548	8548;8572		46.766	13.273	1	6593200	+		35603	23560	23539	23548	40587;40588	40587					0.05713348913616301
LVFGTEEI	8	Unmodified	_LVFGTEEI_					0	0	0			REV__ENSG00000067248|ENST00000251636|DHX29	REV__ENSG00000067248|ENST00000251636|DHX29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.2423400878906	2	454.242201	906.469849	-0.13611	-6.1827E-05	0.36885	0.00016755	0.23274	0.00010572	454.2422343635793	83.137	1.2007	83.204	82.829	84.03	0.066727					41	27	2	0	0	0	0.3842	1	8251	8251		90.939	7.6518	1	327010	+		35604	16540	23540	23549	40589	40589					0.012872739119870857
LVFHKRNFS	9	Unmodified	_LVFHKRNFS_					0	0	0			REV__nc|ENSG00000204852|Q2MV58-5|TCTN1	REV__nc|ENSG00000204852|Q2MV58-5|TCTN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3248291015625	2	574.322183	1146.62981	-0.44784	-0.0002572	-4.1584	-0.0023883	-4.6062	-0.0026455	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.78983	1	9599	9599		27.882	3.3631	1	1099700	+		35605	23524	23541	23550	40590	40590					0.06236246699700132
LVFIRRREAPP	11	Unmodified	_LVFIRRREAPP_					0	0	0			REV__ENSG00000283755|ENST00000640559|CPHXL	REV__ENSG00000283755|ENST00000640559|CPHXL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9425354003906	3	451.941973	1352.80409	0.028854	1.304E-05	2.8756	0.0012996	2.9044	0.0013126	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.78391	1	4822	4822		14.694	0.60766	1	513120	+		35606	24055	23542	23551	40591	40591					0.1417982712500816
LVFLFVYT	8	Unmodified	_LVFLFVYT_					0	0	0		ENSG00000279761|ENST00000623930|OR5D13	ENSG00000279761|ENST00000623930|OR5D13	ENSG00000279761|ENST00000623930|OR5D13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2906799316406	2	501.288954	1000.56336	-0.06476	-3.2463E-05	3.0665	0.0015372	3.0017	0.0015047	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.89457	1	9133	9133		37.028	5.4987	1	9565500			35607	9046	23543	23552	40592	40592					0.06309618085072088
LVFLSFCV	8	Unmodified	_LVFLSFCV_					0	0	0		ENSG00000129450|ENST00000250360|SIGLEC9;nc|ENSG00000129450|Q9Y336-2|SIGLEC9;nc|ENSG00000168995|Q9Y286-2|SIGLEC7;ENSG00000168995|ENST00000317643|SIGLEC7	ENSG00000129450|ENST00000250360|SIGLEC9	ENSG00000129450|ENST00000250360|SIGLEC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2538757324219	2	464.254057	926.493561	-1.597	-0.00074142	1.5248	0.00070789	-0.072229	-3.3533E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.86791	1	8359	8359		28.254	0.37203	1	1324500			35608	3588	23544	23553	40593	40593					0.02737416144816507
LVFLVRAMI	9	Unmodified	_LVFLVRAMI_					0	0	0			REV__ENSG00000137842|ENST00000260403|TMEM62	REV__ENSG00000137842|ENST00000260403|TMEM62	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.328369140625	2	531.33063	1060.64671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.771	1	81.836	81.336	82.336	0.064384								0	0	0	0.29299	1	8061	8061		33.516	4.366	1		+		35609	19417	23545	23554	40594	40594					0.1188103126128226
LVFNDYNDAP	10	Unmodified	_LVFNDYNDAP_					0	0	0			REV__nc|ENSG00000182149|P53990-6|IST1	REV__nc|ENSG00000182149|P53990-6|IST1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.2711181640625	2	584.269478	1166.5244	-0.79557	-0.00046483	2.1385	0.0012495	1.343	0.00078465	584.2698643848227	80.797	0.46429	80.859	80.588	81.053	0.062233					21	10	3	0	0	0	0.73395	1	7937	7937		42.864	5.0528	1	81117	+		35610	22502	23546	23555	40595	40595					-0.05219759007263747
LVFNDYNDAP	10	Unmodified	_LVFNDYNDAP_					0	0	0			REV__nc|ENSG00000182149|P53990-6|IST1	REV__nc|ENSG00000182149|P53990-6|IST1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	584.269478	1166.5244	-0.79557	-0.00046483	2.1385	0.0012495	1.343	0.00078465	584.2698643848227	80.797	0.46429	80.859	80.588	81.053	0.062233	0.04471	0.0013768	NaN	42.864	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81117	+		35611	22502	23546	23555							-0.05219759007263747
LVFNDYNDAP	10	Unmodified	_LVFNDYNDAP_					0	0	0			REV__nc|ENSG00000182149|P53990-6|IST1	REV__nc|ENSG00000182149|P53990-6|IST1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	584.269478	1166.5244	0.77148	0.00045075	-0.16711	-9.7636E-05	0.60437	0.00035311	584.2689870225671	80.89	0.55598	80.83	80.534	81.09	-0.059692	0.015793	-0.0013174	NaN	42.864	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62170	+		35612	22502	23546	23555							-0.05219759007263747
LVFNDYNDAP	10	Unmodified	_LVFNDYNDAP_					0	0	0			REV__nc|ENSG00000182149|P53990-6|IST1	REV__nc|ENSG00000182149|P53990-6|IST1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	584.269478	1166.5244	-0.6168	-0.00036038	1.0757	0.00062849	0.45888	0.00026811	584.2695297346536	80.698	0.57016	80.754	80.468	81.038	0.055916	-0.060503	0.00013486	NaN	42.864	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88724	+		35613	22502	23546	23555							-0.05219759007263747
LVFRFMESPQ	10	Unmodified	_LVFRFMESPQ_					0	0	0			REV__ENST00000515578.5_1_4:420284-429666:-|nuORF	REV__ENST00000515578.5_1_4:420284-429666:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3203735351562	2	627.320991	1252.62743	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.864	1	61.894	61.394	62.394	0.029575								0	0	0	0.45132	1	5770	5770		45.972	5.9141	1		+		35614	28034	23547	23556	40596	40596					0.011220301797266075
LVFSVLLALRV	11	Unmodified	_LVFSVLLALRV_					0	0	0		ENSG00000187713|ENST00000343666|TMEM203	ENSG00000187713|ENST00000343666|TMEM203	ENSG00000187713|ENST00000343666|TMEM203	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	615.4047241210938	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.508	1	54.589	54.089	55.089	0.081524								0	0	0	0.56276	1	4513	4513		23.523	4.4192	1				35615	7872	23548	23557	40597	40597					0.18548576293051156
LVGARDRLGP	10	Unmodified	_LVGARDRLGP_					0	0	0		ENST00000478260.5_1_11:3108637-3108949:-|nuORF	ENST00000478260.5_1_11:3108637-3108949:-|nuORF	ENST00000478260.5_1_11:3108637-3108949:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3111572265625	2	527.311815	1052.60908	0.22805	0.00012025	-1.4606	-0.00077019	-1.2325	-0.00064993	527.3109109335428	80.785	0.86409	81.312	80.907	81.771	0.52676					54	20	3	0	0	0	0.3985	1	9336	9336		64.207	0	1	2180000			35616	12382	23549	23558	40598	40598					0.08487656320016868
LVGARDRLGP	10	Unmodified	_LVGARDRLGP_					0	0	0		ENST00000478260.5_1_11:3108637-3108949:-|nuORF	ENST00000478260.5_1_11:3108637-3108949:-|nuORF	ENST00000478260.5_1_11:3108637-3108949:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	527.311815	1052.60908	-0.12798	-6.7485E-05	0.46872	0.00024716	0.34074	0.00017968	527.3123544738351	81.075	0.51562	81.22	81.013	81.529	0.14512	-0.077565	0.0018856	NaN	64.207	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93917			35617	12382	23549	23558							0.08487656320016868
LVGAVLYLYPA	11	Unmodified	_LVGAVLYLYPA_					0	0	0		nc|ENSG00000119004|Q6UW02-2|CYP20A1;ENSG00000119004|ENST00000356079|CYP20A1	nc|ENSG00000119004|Q6UW02-2|CYP20A1	nc|ENSG00000119004|Q6UW02-2|CYP20A1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.6793212890625	2	589.844625	1177.6747	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.98	1	71.056	70.556	71.556	0.076225								0	0	0	0.56276	1	6429	6429		24.203	3.2558	1				35618	3052	23550	23559	40599	40599					0.09296632722362119
LVGDNLVL	8	Unmodified	_LVGDNLVL_					0	0	0			REV__ENSG00000145041|ENST00000684031|DCAF1	REV__ENSG00000145041|ENST00000684031|DCAF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.7510070800781	2	421.752736	841.490919	0.55974	0.00023607	-3.5226	-0.0014857	-2.9629	-0.0012496	421.75115791840494	76.846	3.6914	77.246	76.162	79.853	0.39969					139	94	2	0	0	0	0.86791	1	8772	8772		28.254	1.4582	1	289270	+		35619	19924	23551	23560	40600	40600					0.06383284011508294
LVGEEILP	8	Unmodified	_LVGEEILP_					0	0	0		ENST00000596853.5_2_19:14638565-14639960:-|nuORF	ENST00000596853.5_2_19:14638565-14639960:-|nuORF	ENST00000596853.5_2_19:14638565-14639960:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2526550292969	2	435.252569	868.490584	-1.2943	-0.00056337	-1.5363	-0.00066866	-2.8306	-0.001232	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.86288	1	7201	7201		26.796	0	1	1788100			35620	14341	23552	23561	40601	40601					0.05107864291676378
LVGEPTTFY	9	Unmodified	_LVGEPTTFY_					0	0	0		ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	ENSG00000205277|ENST00000536621|MUC12	ENSG00000205277|ENST00000536621|MUC12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.760498046875	2	513.760758	1025.50696	0.11106	5.7058E-05	0.039034	2.0054E-05	0.15009	7.7112E-05	513.7606642855523	84.668	1.4364	85.116	84.674	86.111	0.44736					97	35	5	0	0	0	0.39977	1	9937	9937		57.811	0	1	5600500			35621	8520	23553	23562	40602	40602					-0.00477054542238875
LVGEWCCHP	9	Unmodified	_LVGEWCCHP_					0	0	0		ENST00000237186.10_1_6:83602743-83775466:-|nuORF;ENST00000505226.1_1_6:83748090-83767722:-|nuORF;ENSG00000118420|ENST00000369747|UBE3D	ENST00000237186.10_1_6:83602743-83775466:-|nuORF	ENST00000237186.10_1_6:83602743-83775466:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.2259521484375	2	522.225505	1042.43646	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.529	1	75.924	75.424	76.424	0.39507								0	0	0	0.36597	1	8545	8545		60.294	13.837	1				35622	9236	23554	23563	40603	40603					-0.0830637440319606
LVGEWCCHP	9	Unmodified	_LVGEWCCHP_					0	0	0		ENST00000237186.10_1_6:83602743-83775466:-|nuORF;ENST00000505226.1_1_6:83748090-83767722:-|nuORF;ENSG00000118420|ENST00000369747|UBE3D	ENST00000237186.10_1_6:83602743-83775466:-|nuORF	ENST00000237186.10_1_6:83602743-83775466:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.227783203125	2	522.225505	1042.43646	0.046117	2.4084E-05	1.4184	0.00074071	1.4645	0.0007648	522.2278971667681	75.313	1.3503	75.877	75.413	76.764	0.56458					115	32	5	0	0	0	0.76402	1	8534	8534		35.201	1.6851	1	915270			35623	9236	23554	23563	40604	40604					-0.0830637440319606
LVGGASGPAGA	11	Unmodified	_LVGGASGPAGA_					0	0	0			REV__ENSG00000147804|ENST00000301305|SLC39A4	REV__ENSG00000147804|ENST00000301305|SLC39A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.7286071777344	2	428.729792	855.445031	-0.093289	-3.9996E-05	-1.7351	-0.00074388	-1.8284	-0.00078387	428.72912266567045	79.947	1.0154	80.363	79.913	80.928	0.41621					50	23	4	0	0	0	0.68378	1	9172	9172		34.173	0.65696	1	869790	+		35624	20086	23555	23564	40605	40605					0.011526388292850243
LVGGASGPAGA	11	Unmodified	_LVGGASGPAGA_					0	0	0			REV__ENSG00000147804|ENST00000301305|SLC39A4	REV__ENSG00000147804|ENST00000301305|SLC39A4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	428.729792	855.445031	-0.093289	-3.9996E-05	-1.7351	-0.00074388	-1.8284	-0.00078387	428.72912266567045	79.947	1.0154	80.363	79.913	80.928	0.41621	0.016421	-0.00012751	NaN	34.173	50	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	869790	+		35625	20086	23555	23564							0.011526388292850243
LVGGIKMLDS	10	Unmodified	_LVGGIKMLDS_					0	0	0			REV__nc|ENSG00000159267|P50747|HLCS	REV__nc|ENSG00000159267|P50747|HLCS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7938232421875	2	516.791535	1031.56852	0.70992	0.00036688	3.0022	0.0015515	3.7121	0.0019184	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.86763	1	8818	8818		26.693	1.1189	1	842420	+		35626	20650	23556	23565	40606	40606					0.05399553885399655
LVGGLHTVYT	10	Unmodified	_LVGGLHTVYT_					0	0	0		nc|ENSG00000276644|Q9UI36-3|DACH1;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36|DACH1;nc|ENSG00000276644|Q9UI36-4|DACH1;nc|ENSG00000126733|Q96NX9-2|DACH2;ENSG00000126733|ENST00000373125|DACH2	nc|ENSG00000276644|Q9UI36-3|DACH1	nc|ENSG00000276644|Q9UI36-3|DACH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2938232421875	2	530.295299	1058.57605	-1.5163	-0.00080409	-2.0724	-0.001099	-3.5887	-0.0019031	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.85934	1	9107	9107		35.618	3.6634	1	1686700			35627	9015	23557	23566	40607	40607					0.04910029477309763
LVGGQSLLALY	11	Unmodified	_LVGGQSLLALY_					0	0	0			REV__ENST00000262059.8_1_12:54105502-54105616:-|nuORF	REV__ENST00000262059.8_1_12:54105502-54105616:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3301391601562	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.75495	1	9465	9465		20.947	0.95016	1	15673000	+		35628	24407	23558	23567	40608	40608					0.0881915819995811
LVGGSAITVG	10	Unmodified	_LVGGSAITVG_					0	0	0			REV__chr10:70093845-70109033|56|16.41|0.8|4.36|+|ENST00000677881|MACROH2A2,MACROH2A2	REV__chr10:70093845-70109033|56|16.41|0.8|4.36|+|ENST00000677881|MACROH2A2,MACROH2A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.56915283203125	2	437.255643	872.496732	0.35847	0.00015674	0.2608	0.00011404	0.61927	0.00027078	437.25562406565564	34.738	1.0584	34.948	34.107	35.166	0.21002					41	25	2	0	0	0	0.37624	1	2525	2525		35.618	7.364	1	340190	+		35629	15479	23559	23568	40609	40609					0.055383825231729134
LVGGSAITVG	10	Unmodified	_LVGGSAITVG_					0	0	0			REV__chr10:70093845-70109033|56|16.41|0.8|4.36|+|ENST00000677881|MACROH2A2,MACROH2A2	REV__chr10:70093845-70109033|56|16.41|0.8|4.36|+|ENST00000677881|MACROH2A2,MACROH2A2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	437.255643	872.496732	-1.6045	-0.0007016	0.63837	0.00027913	-0.96618	-0.00042247	437.2559516474733	35.244	0.21919	35.282	35.192	35.411	0.038643	0.16698	0.00028749	NaN	35.618	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26175	+		35630	15479	23559	23568							0.055383825231729134
LVGHLKTI	8	Unmodified	_LVGHLKTI_					0	0	0		ENSG00000275832|ENST00000622683|ARHGAP23;nc|ENSG00000275832|Q9P227-2|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7857971191406	2	440.78437	879.554188	-1.696	-0.00074758	-4.3832	-0.0019321	-6.0793	-0.0026796	440.7806757461855	52.571	1.9055	52.571	51.698	53.604	0					138	52	4	0	0	0	0.85277	1	4292	4292		25.45	4.9683	1	195220			35631	9007	23560	23569	40610	40610					0.10959269519435111
LVGIEKKF	8	Unmodified	_LVGIEKKF_					0	0	0		ENSG00000077152|ENST00000646651|UBE2T	ENSG00000077152|ENST00000646651|UBE2T	ENSG00000077152|ENST00000646651|UBE2T	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2905578613281	2	467.292028	932.569503	0.090159	4.213E-05	-3.307	-0.0015453	-3.2168	-0.0015032	467.29038676820915	33.276	0.922	33.445	33.103	34.025	0.16971					54	21	4	0	0	0	0.91977	1	2395	2395		45.952	1.4209	1	2902500			35632	1374	23561	23570	40611	40611					0.10052136316608085
LVGKGFLTQN	10	Unmodified	_LVGKGFLTQN_					0	0	0		ENSG00000112214|ENST00000450218|FHL5	ENSG00000112214|ENST00000450218|FHL5	ENSG00000112214|ENST00000450218|FHL5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.8071899414062	2	538.808574	1075.60259	0.74987	0.00040403	-4.2313	-0.0022799	-3.4814	-0.0018758	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.85934	1	9107	9107		35.618	4.0885	1	840570			35633	2640	23562	23571	40612	40612					0.06781718368665679
LVGKVMVQ	8	Unmodified	_LVGKVMVQ_					0	0	0		ENST00000530516.1_1_11:3740747-3741953:-|nuORF	ENST00000530516.1_1_11:3740747-3741953:-|nuORF	ENST00000530516.1_1_11:3740747-3741953:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26666259765625	2	437.264956	872.515359	0.044356	1.9395E-05	1.5469	0.00067641	1.5913	0.0006958	437.26562029129207	23.787	1.9639	23.882	23.206	25.169	0.094501					226	94	5	0	0	0	0.86288	1	849	849		26.796	6.3143	1	2622700			35634	13346	23563	23572	40613	40613					0.0740022089340755
LVGLGVALP	9	Unmodified	_LVGLGVALP_					0	0	0			REV__ENSG00000178401|ENST00000549441|DNAJC22	REV__ENSG00000178401|ENST00000549441|DNAJC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7751159667969	2	419.773471	837.53239	-0.61524	-0.00025826	4.1706	0.0017507	3.5554	0.0014924	419.77510623203386	52.301	1.7898	52.227	50.978	52.768	-0.074509					74	52	2	0	0	0	0.7932	1	4216	4216		14.664	0	1	183680	+		35635	22277	23564	23573	40614	40614					0.10712464770847419
LVGLPELT	8	Unmodified	_LVGLPELT_					0	0	0			REV__ENSG00000117877|ENST00000309424|POLR1G	REV__ENSG00000117877|ENST00000309424|POLR1G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.2542724609375	2	421.255111	840.49567	-1.773	-0.00074688	-0.90379	-0.00038073	-2.6768	-0.0011276	421.25456874716457	84.085	1.5006	84.252	83.669	85.17	0.16721					78	34	3	0	0	0	0.85277	1	8162	8162		25.45	0	1	757090	+		35636	18286	23565	23574	40615	40615					0.06904168154278523
LVGMVYVF	8	Unmodified	_LVGMVYVF_					0	0	0		nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6;nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-5|MARCHF6	nc|ENSG00000145495|O60337-5|MARCHF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2530517578125	2	464.254057	926.493561	-1.0566	-0.00049054	0.98159	0.00045571	-0.075022	-3.4829E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.88393	1	8390	8390		33.493	1.5381	1	1603800			35637	4773	23566	23575	40616	40616					0.027374161448278755
LVGNLGLVYL	10	Unmodified	_LVGNLGLVYL_					0	0	0		ENSG00000181009|ENST00000641181|OR52N5	ENSG00000181009|ENST00000641181|OR52N5	ENSG00000181009|ENST00000641181|OR52N5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8208618164062	2	530.823692	1059.63283	-0.85098	-0.00045172	-4.1464	-0.002201	-4.9974	-0.0026527	530.8213432265311	82.745	2.1308	82.745	82.264	84.395	0					134	52	5	0	0	0	0.84112	2	7754	7754;7766		37.159	1.5408	1	4119600			35638	7366	23567	23576	40617;40618	40617					0.10540077033851958
LVGPFQHPW	9	Unmodified	_LVGPFQHPW_					0	0	0			REV__ENST00000564777.5_1_15:74281135-74282785:-|nuORF	REV__ENST00000564777.5_1_15:74281135-74282785:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.49072265625	2	540.784902	1079.55525	-1.7972	-0.00097189	-3.2055	-0.0017335	-5.0027	-0.0027054	540.7832180221252	39.679	0.58338	40.047	39.729	40.313	0.36797					19	13	2	0	0	0	0.20789	1	3331	3331		26.796	1.3459	1	107180	+		35639	28845	23568	23577	40619	40619					0.01865483888309427
LVGQLKEAM	9	Unmodified	_LVGQLKEAM_					0	0	0		chr6:125292909-125301849|15|22.13|0.17|7.05|-|0|HDDC2,HDDC2|1	chr6:125292909-125301849|15|22.13|0.17|7.05|-|0|HDDC2,HDDC2|1	chr6:125292909-125301849|15|22.13|0.17|7.05|-|0|HDDC2,HDDC2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.780029296875	2	494.778428	987.542302	1.0619	0.0005254	2.8604	0.0014153	3.9223	0.0019407	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.78983	1	8795	8795		27.882	0.83493	1	657500			35640	465	23569	23578	40620	40620					0.0480328471392113
LVGRSAGPGGG	11	Unmodified	_LVGRSAGPGGG_					0	0	0			REV__ENSG00000135776|ENST00000344517|ABCB10	REV__ENSG00000135776|ENST00000344517|ABCB10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2528076171875	2	464.253966	926.493378	0.59461	0.00027605	-0.68101	-0.00031616	-0.0864	-4.0112E-05	464.25355465849185	81.523	3.0273	81.667	79.894	82.921	0.14352					163	84	3	0	0	0	0.65746	1	7748	7748		37.812	4.9991	1	434730	+		35641	19250	23570	23579	40621	40621					0.02719132469201213
LVGTKVLMAS	10	Unmodified	_LVGTKVLMAS_					0	0	0		nc|ENSG00000173083|Q9Y251-3|HPSE;nc|ENSG00000173083|Q9Y251-2|HPSE;ENSG00000173083|ENST00000311412|HPSE	nc|ENSG00000173083|Q9Y251-3|HPSE	nc|ENSG00000173083|Q9Y251-3|HPSE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8037109375	2	509.801903	1017.58925	-0.073627	-3.7535E-05	3.6181	0.0018445	3.5444	0.001807	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.8545	1	10151	10151		36.447	0.82846	1	3087300			35642	6824	23571	23580	40622	40622					0.08116144265068215
LVGTQDRISA	10	Unmodified	_LVGTQDRISA_					0	0	0		nc|ENSG00000135439|Q99490|AGAP2;ENSG00000135439|ENST00000547588|AGAP2;nc|ENSG00000135439|Q99490-2|AGAP2	nc|ENSG00000135439|Q99490|AGAP2	nc|ENSG00000135439|Q99490|AGAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2933349609375	2	530.293288	1058.57202	1.6334	0.0008662	-1.7145	-0.0009092	-0.081076	-4.2994E-05	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.8545	1	10759	10759		36.447	0.82846	1	1816400			35643	4019	23572	23581	40623	40623					0.04507939983614051
LVGTVPIGYFR	11	Unmodified	_LVGTVPIGYFR_					0	0	0			REV__ENSG00000102996|ENST00000219271|MMP15	REV__ENSG00000102996|ENST00000219271|MMP15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3549194335938	2	611.353148	1220.69174	0.85003	0.00051967	3.7876	0.0023156	4.6376	0.0028352	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.64498	1	9518	9518		39.253	1.4413	1	6836400	+		35644	17377	23573	23582	40624	40624					0.09022553328145477
LVGVPVGAL	9	Unmodified	_LVGVPVGAL_					0	0	0			REV__nc|ENSG00000187609|Q8N9H8-3|EXD3	REV__nc|ENSG00000187609|Q8N9H8-3|EXD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2673645019531	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.7932	1	2892	2892		21.702	6.0661	1	818920	+		35645	22927	23574	23583	40625	40625					0.09792178253815109
LVGYRISH	8	Unmodified	_LVGYRISH_					0	0	0		ENSG00000153208|ENST00000295408|MERTK	ENSG00000153208|ENST00000295408|MERTK	ENSG00000153208|ENST00000295408|MERTK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7673034667969	2	472.769252	943.52395	-1.568	-0.00074129	-2.6998	-0.0012764	-4.2678	-0.0020177	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.89457	1	7940	7940		37.028	1.8278	1	404330			35646	5222	23575	23584	40626	40626					0.04992910854230104
LVHKCPVI	8	Unmodified	_LVHKCPVI_					0	0	0			REV__ENSG00000127578|ENST00000319070|WFIKKN1	REV__ENSG00000127578|ENST00000319070|WFIKKN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.76318359375	2	454.772948	907.531344	-1.6504	-0.00075058	2.0221	0.00091962	0.3717	0.00016904	454.7737760767766	47.704	0.11198	48.174	48.082	48.194	0.46941					4	2	2	0	0	0	0.4196	1	4554	4554		33.516	6.7195	1	76931	+		35647	18741	23576	23585	40627	40627					0.07387927130298522
LVHKGIIIK	9	Unmodified	_LVHKGIIIK_					0	0	0			REV__ENST00000254801.8_1_4:71521490-71521655:-|nuORF	REV__ENST00000254801.8_1_4:71521490-71521655:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.8524169921875	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.41	1	112.35	111.85	112.85	-0.063889								0	0	0	0.36199	1	12209	12209		7.6903	0	1		+		35648	24311	23577	23586	40628	40628					0.1764807988731718
LVHKGIIIK	9	Unmodified	_LVHKGIIIK_					0	0	0			REV__ENST00000254801.8_1_4:71521490-71521655:-|nuORF	REV__ENST00000254801.8_1_4:71521490-71521655:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.8561706542969	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.36	1	114.29	113.79	114.79	-0.07								0	0	0	0.36191	1	12371	12371		7.1934	0	1		+		35649	24311	23577	23586	40629	40629					0.1764807988731718
LVHRYGKKLS	10	Unmodified	_LVHRYGKKLS_					0	0	0			REV__ENST00000463724.1_1_1:74648194-74648635:-|nuORF	REV__ENST00000463724.1_1_1:74648194-74648635:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9158935546875	3	400.911902	1199.71388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.88	1	112.91	112.41	113.41	0.030602								0	0	0	0.45132	1	13648	13648		21.686	3.8526	1		+		35650	20828	23578	23587	40630	40630					0.1220077779660187
LVIAKVAEHI	10	Unmodified	_LVIAKVAEHI_					0	0	0			REV__nc|ENSG00000166377|O43861-2|ATP9B	REV__nc|ENSG00000166377|O43861-2|ATP9B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8404541015625	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.77314	1	10640	10640		40.778	0.20554	1	44929000	+		35651	21286	23579	23588	40631	40631					0.12811168299458586
LVIARTIM	8	Unmodified	_LVIARTIM_					0	0	0			REV__ENSG00000280021|ENST00000624103|OR51F1	REV__ENSG00000280021|ENST00000624103|OR51F1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7875671386719	2	458.786056	915.557558	-0.56464	-0.00025905	4.3311	0.001987	3.7664	0.001728	458.7879697200244	92.862	1.6326	93.312	92.732	94.365	0.44989					129	38	4	0	0	0	0.87922	1	11086	11086		31.955	0	1	6441800	+		35652	24043	23580	23589	40632	40632					0.09640196301779724
LVICRKPK	8	Unmodified	_LVICRKPK_					0	0	0		ENST00000451982.6_2_3:195408438-195423327:+|nuORF	ENST00000451982.6_2_3:195408438-195423327:+|nuORF	ENST00000451982.6_2_3:195408438-195423327:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8058776855469	2	478.807322	955.600092	-2.669	-0.0012779	-0.055798	-2.6716E-05	-2.7248	-0.0013047	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.85277	1	2762	2762		25.45	3.4903	1	370420			35653	11911	23581	23590	40633	40633					0.12051591430008557
LVIEAVLEP	9	Unmodified	_LVIEAVLEP_					0	0	0			REV__nc|ENSG00000164574|Q86SR1-3|GALNT10	REV__nc|ENSG00000164574|Q86SR1-3|GALNT10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7959289550781	2	491.794601	981.574648	0.36727	0.00018062	1.827	0.0008985	2.1942	0.0010791	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.7932	1	4467	4467		24.203	3.7209	1	748320	+		35654	21091	23582	23591	40634	40634					0.08312395388566074
LVIFSAPFSD	10	Unmodified	_LVIFSAPFSD_					0	0	0			REV__ENST00000409304.5_1_2:224840459-224840564:-|nuORF	REV__ENST00000409304.5_1_2:224840459-224840564:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	548.2909545898438	2	548.289682	1094.56481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.748	1	67.876	67.376	68.376	0.12748								0	0	0	0.45132	1	6068	6068		20.947	1.587	1		+		35655	26342	23583	23592	40635	40635					0.02131207383195033
LVIGVLTAS	9	Unmodified	_LVIGVLTAS_					0	0	0		nc|ENSG00000134759|Q6IA86-4|ELP2	nc|ENSG00000134759|Q6IA86-4|ELP2	nc|ENSG00000134759|Q6IA86-4|ELP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7748107910156	2	436.776211	871.537869	-1.8179	-0.00079401	-1.324	-0.00057831	-3.1419	-0.0013723	436.77554812926275	90.686	2.546	90.866	90.262	92.808	0.18029					181	60	4	0	0	0	0.77546	1	9174	9174		31.955	0	1	8965000			35656	14935	23584	23593	40636	40636					0.0969614356265538
LVIHKTIH	8	Unmodified	_LVIHKTIH_					0	0	0		ENSG00000213799|ENST00000458035|ZNF845;ENST00000474037.5_1_19:53886174-53886573:+|nuORF	ENSG00000213799|ENST00000458035|ZNF845	ENSG00000213799|ENST00000458035|ZNF845	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.2812805175781	2	480.803094	959.591636	-1.6775	-0.00080654	-2.4847	-0.0011947	-4.1622	-0.0020012	480.80173976735637	99.153	1.7475	99.338	98.68	100.43	0.18581					59	40	2	0	0	0	0.4196	1	10318	10318		14.664	0.88877	1	191680			35657	8602	23585	23594	40637	40637					0.1102236078503438
LVIIKKIKALS	11	Unmodified	_LVIIKKIKALS_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|5|1|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|5|1|sense	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	409.29193115234375	3	409.29172	1224.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.092	1	19.069	18.569	19.569	-0.023342								0	0	0	0.56276	1	393	393		6.001	1.6622	1		+		35658	29450	23586	23595	40638	40638					0.24989722361260647
LVIIKKIKALS	11	Unmodified	_LVIIKKIKALS_					0	0	0			REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|5|1|sense	REV__HSMAR1_dup611|chr15:35314221-35315477:+|3.299486271825631|0.0496067841758995|6.06|62.0|5|1|sense	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2923278808594	3	409.29172	1224.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.472	1	19.843	19.343	20.343	-0.6296								0	0	0	0.56276	1	656	656		8.7993	3.1005	1		+		35659	29450	23586	23595	40639	40639					0.24989722361260647
LVIISNATAM	10	Unmodified	_LVIISNATAM_					0	0	0			REV__nc|ENSG00000204209|Q9UER7-5|DAXX	REV__nc|ENSG00000204209|Q9UER7-5|DAXX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.793212890625	2	516.791535	1031.56852	0.99276	0.00051305	2.6742	0.001382	3.6669	0.001895	516.7928545442046	88.056	2.5505	88.505	87.601	90.152	0.44892					168	61	3	0	0	0	0.8545	1	10390	10390		36.447	2.9312	1	584700	+		35660	30159	23587	23596	40640	40640					0.053995538853769176
LVILLPLIN	9	Unmodified	_LVILLPLIN_					0	0	0		ENSG00000134115|ENST00000446702|CNTN6	ENSG00000134115|ENST00000446702|CNTN6	ENSG00000134115|ENST00000446702|CNTN6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.2740173339844	2	504.346803	1006.67905	0.21139	0.00010661	-3.0906	-0.0015587	-2.8792	-0.0014521	504.345131472545	85.381	1.2881	85.828	85.115	86.403	0.44736					38	31	2	0	0	0	0.20789	1	10073	10073		13.775	5.544	1	99662			35661	3911	23588	23597	40641	40641					0.17598141935945932
LVILQKPGVL	10	Unmodified	_LVILQKPGVL_					0	0	0			REV__ENSG00000084092|ENST00000264230|NOA1	REV__ENSG00000084092|ENST00000264230|NOA1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.3623046875	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.667	1	44.633	44.133	45.133	-0.033474								0	0	0	0.45132	1	3572	3572		24.203	6.8378	1		+		35662	16867	23589	23598	40642	40642					0.17520929338934366
LVILQKPGVL	10	Unmodified	_LVILQKPGVL_					0	0	0			REV__ENSG00000084092|ENST00000264230|NOA1	REV__ENSG00000084092|ENST00000264230|NOA1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.3637084960938	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.574	1	44.516	44.016	45.016	-0.058262								0	0	0	0.45132	1	3149	3149		17.365	5.1581	1		+		35663	16867	23589	23598	40643	40643					0.17520929338934366
LVILQKPT	8	Unmodified	_LVILQKPT_					0	0	0		ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3017883300781	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.91005	1	2166	2166		42.474	7.2737	1	1715600			35664	6723	23590	23599	40644	40644					0.1262842283365444
LVILRYKDS	9	Unmodified	_LVILRYKDS_					0	0	0			REV__nc|ENSG00000082126|Q96JB8-5|MPP4	REV__nc|ENSG00000082126|Q96JB8-5|MPP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8300170898438	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.7932	1	8720	8720		23.042	3.0457	1	3935500	+		35665	16832	23591	23600	40645	40645					0.10094577919790026
LVILRYKDS	9	Unmodified	_LVILRYKDS_					0	0	0			REV__nc|ENSG00000082126|Q96JB8-5|MPP4	REV__nc|ENSG00000082126|Q96JB8-5|MPP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8297729492188	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.77244	1	9157	9157		32.812	7.3622	1	1489800	+		35666	16832	23591	23600	40646	40646					0.10094577919790026
LVILRYKDS	9	Unmodified	_LVILRYKDS_					0	0	0			REV__nc|ENSG00000082126|Q96JB8-5|MPP4	REV__nc|ENSG00000082126|Q96JB8-5|MPP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.82958984375	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.78536	1	8617	8617		29.15	1.2673	1	1728300	+		35667	16832	23591	23600	40647	40647					0.10094577919790026
LVILRYKDS	9	Unmodified	_LVILRYKDS_					0	0	0			REV__nc|ENSG00000082126|Q96JB8-5|MPP4	REV__nc|ENSG00000082126|Q96JB8-5|MPP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8299560546875	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.67345	2	10939	10828;10939		42.396	1.8235	1	5911200	+		35668	16832	23591	23600	40648;40649	40649					0.10094577919790026
LVILVTVLQR	10	Unmodified	_LVILVTVLQR_					0	0	0		ENSG00000198569|ENST00000673835|SLC34A3	ENSG00000198569|ENST00000673835|SLC34A3	ENSG00000198569|ENST00000673835|SLC34A3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3663940429688	2	577.386991	1152.75943	-0.31646	-0.00018272	-1.4529	-0.00083889	-1.7694	-0.0010216	577.3863099565368	102.74	0.15697	102.74	102.63	102.79	0					5	3	2	0	0	0	0.37624	1	10509	10509		25.574	0	1	20674			35669	8289	23592	23601	40650	40650					0.18916003258982528
LVIMLKMF	8	Unmodified	_LVIMLKMF_					0	0	0		ENST00000440549.6_2_18:33691017-33691128:-|nuORF	ENST00000440549.6_2_18:33691017-33691128:-|nuORF	ENST00000440549.6_2_18:33691017-33691128:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.794189453125	2	497.795035	993.575517	0.33469	0.00016661	1.5104	0.00075186	1.8451	0.00091847	497.79551634358694	49.085	0.97178	49.123	48.706	49.678	0.037735					52	22	3	0	0	0	0.87276	1	3741	3741		29.842	3.0454	1	383630			35670	11772	23593	23602	40651	40651					0.07847195232284321
LVIPAHYVRL	10	Unmodified	_LVIPAHYVRL_					0	0	0		ENSG00000161682|ENST00000293443|FAM171A2	ENSG00000161682|ENST00000293443|FAM171A2	ENSG00000161682|ENST00000293443|FAM171A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8677978515625	2	590.863683	1179.71281	3.2055	0.001894	2.0239	0.0011959	5.2294	0.0030899	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.86452	1	12696	12696		30.504	0.18592	1	6398400			35671	5651	23594	23603	40652	40652					0.13014563427691428
LVIPLDELT	9	Unmodified	_LVIPLDELT_					0	0	0		nc|ENSG00000137601|Q96PY6|NEK1;ENSG00000137601|ENST00000507142|NEK1;nc|ENSG00000137601|Q96PY6-4|NEK1;nc|ENSG00000137601|Q96PY6-2|NEK1;nc|ENSG00000137601|Q96PY6-6|NEK1	nc|ENSG00000137601|Q96PY6|NEK1	nc|ENSG00000137601|Q96PY6|NEK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3102722167969	2	506.799883	1011.58521	-0.49395	-0.00025034	3.2876	0.0016661	2.7936	0.0014158	506.80151845061806	48.096	1.8847	48.118	47.669	49.554	0.02227					69	50	2	0	0	0	0.20789	1	3674	3674		24.203	4.8428	1	219330			35672	4217	23595	23604	40653	40653					0.07988378042978184
LVIPTGPK	8	Unmodified	_LVIPTGPK_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7671203613281	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.149	1	42.12	41.62	42.62	-0.029461								0	0	0	0.29498	1	3128	3128		26.796	0	1		+		35673	17017	23596	23605	40654	40654					0.09792178253815109
LVIPTGPK	8	Unmodified	_LVIPTGPK_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7669677734375	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.86288	1	2537	2537		26.796	0	1	2097300	+		35674	17017	23596	23605	40655	40655					0.09792178253815109
LVIPTGPK	8	Unmodified	_LVIPTGPK_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.766357421875	2	412.765646	823.516739	-1.3459	-0.00055553	3.4065	0.0014061	2.0606	0.00085056	412.76701040612045	40.372	1.7448	40.328	39.579	41.324	-0.043694					94	45	3	0	0	0	0.86791	1	2955	2955		28.254	0	1	625910	+		35675	17017	23596	23605	40656	40656					0.09792178253815109
LVIPTGPK	8	Unmodified	_LVIPTGPK_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7663879394531	2	412.765646	823.516739	-1.0958	-0.00045233	2.7086	0.001118	1.6128	0.0006657	412.76710496522145	44.033	1.9061	43.999	42.844	44.75	-0.03347					106	44	3	0	0	0	0.86288	1	3504	3504		26.796	0	1	328990	+		35676	17017	23596	23605	40657	40657					0.09792178253815109
LVIPTGPK	8	Unmodified	_LVIPTGPK_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.766845703125	2	412.765646	823.516739	0.2674	0.00011037	3.4179	0.0014108	3.6853	0.0015212	412.76694459903433	48.848	3.1893	48.886	47.742	50.932	0.037731					149	88	4	0	0	0	0.82464	1	3728	3728		21.702	0	1	734040	+		35677	17017	23596	23605	40658	40658					0.09792178253815109
LVIPTGPK	8	Unmodified	_LVIPTGPK_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7668762207031	2	412.765646	823.516739	1.2585	0.00051947	2.4286	0.0010024	3.6871	0.0015219	412.7665201070099	37.01	2.3211	37.292	35.703	38.024	0.28173					152	57	4	0	0	0	0.884	1	2980	2980		33.516	3.674	1	3102100	+		35678	17017	23596	23605	40659	40659					0.09792178253815109
LVISFHDF	8	Unmodified	_LVISFHDF_					0	0	0		ENST00000303575.8_1_14:75601016-75601088:-|nuORF	ENST00000303575.8_1_14:75601016-75601088:-|nuORF	ENST00000303575.8_1_14:75601016-75601088:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.20062255859375	2	489.258185	976.501818	0.10934	5.3495E-05	-1.1381	-0.00055681	-1.0287	-0.00050331	489.2580717706195	54.118	0.50467	54.525	54.153	54.657	0.40663					15	11	2	0	0	0	0.4196	1	5502	5502		46.766	6.1938	1	137180			35679	9836	23597	23606	40660	40660					0.012626863858031356
LVISKVTMSV	10	Unmodified	_LVISKVTMSV_					0	0	0			REV__ENSG00000198691|ENST00000370225|ABCA4	REV__ENSG00000198691|ENST00000370225|ABCA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8231811523438	2	538.822835	1075.63112	1.5025	0.0008096	3.6914	0.001989	5.194	0.0027986	538.8249209892833	104.7	0.46516	104.86	104.72	105.18	0.15584					19	12	2	0	0	0	0.8545	1	12774	12774		36.447	2.2742	1	124720	+		35680	23357	23598	23607	40661	40661					0.09632699953613155
LVISSVTVFY	10	Unmodified	_LVISSVTVFY_					0	0	0		ENSG00000169902|ENST00000304842|TPST1	ENSG00000169902|ENST00000304842|TPST1	ENSG00000169902|ENST00000304842|TPST1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.3231201171875	2	564.320983	1126.62741	0.82903	0.00046784	2.9516	0.0016656	3.7806	0.0021335	564.3225872934454	16.377	0.67253	15.89	15.696	16.369	-0.48718					29	14	4	0	0	0	0.8608	1	118	118		34.173	0.086041	1	729870			35681	6539	23599	23608	40662	40662					0.06916353451379109
LVITGKPLA	9	Unmodified	_LVITGKPLA_					0	0	0			REV__nc|ENSG00000106853|Q14914-2|PTGR1	REV__nc|ENSG00000106853|Q14914-2|PTGR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3011474609375	2	456.299853	910.585153	-1.267	-0.00057813	4.2907	0.0019578	3.0237	0.0013797	456.3016565043114	33.346	1.5471	33.392	33.095	34.642	0.045853					160	67	4	0	0	0	0.76255	1	1601	1601		35.618	2.1253	1	1558600	+		35682	17634	23600	23609	40663	40663					0.12628422833643071
LVITGKPLA	9	Unmodified	_LVITGKPLA_					0	0	0			REV__nc|ENSG00000106853|Q14914-2|PTGR1	REV__nc|ENSG00000106853|Q14914-2|PTGR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.301025390625	2	456.299853	910.585153	-0.40408	-0.00018438	3.3963	0.0015497	2.9922	0.0013653	456.3012719086531	32.915	1.5209	33.085	32.546	34.067	0.16971					108	35	4	0	0	0	0.7932	1	2360	2360		24.203	1.166	1	2612400	+		35683	17634	23600	23609	40664	40664					0.12628422833643071
LVITHSSSTL	10	Unmodified	_LVITHSSSTL_					0	0	0			REV__ENSG00000078295|ENST00000338316|ADCY2	REV__ENSG00000078295|ENST00000338316|ADCY2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.8223876953125	2	529.298039	1056.58152	2.3836	0.0012616	1.437	0.00076059	3.8206	0.0020222	529.2989212716997	104.76	0.58977	104.91	104.64	105.23	0.15584					21	15	2	0	0	0	0.37624	1	12753	12753		40.778	5.5774	1	66600	+		35684	16762	23601	23610	40665	40665					0.055497082691545074
LVITQSSE	8	Unmodified	_LVITQSSE_					0	0	0		nc|ENSG00000107036|Q4ADV7-3|RIC1;ENSG00000107036|ENST00000414202|RIC1	nc|ENSG00000107036|Q4ADV7-3|RIC1	nc|ENSG00000107036|Q4ADV7-3|RIC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.7386779785156	2	438.737283	875.460012	0.22721	9.9686E-05	2.0321	0.00089158	2.2594	0.00099126	438.7379019252359	22.15	0.41211	21.54	21.332	21.745	-0.6107					20	10	3	0	0	0	0.89494	1	878	878		37.159	1.9584	1	80972			35685	2328	23602	23611	40666	40666					0.01730085906626755
LVIVFTVTMD	10	Unmodified	_LVIVFTVTMD_					0	0	0		ENSG00000182854|ENST00000332238|OR4F15	ENSG00000182854|ENST00000332238|OR4F15	ENSG00000182854|ENST00000332238|OR4F15	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8530883789062	2	569.314843	1136.61513	0.52577	0.00029933	2.6963	0.001535	3.222	0.0018344	569.3156514271898	102.21	0.35685	102.41	102.33	102.69	0.19483					10	8	2	0	0	0	0.37624	1	10788	10788		29.15	0	1	207990			35686	7476	23603	23612	40667	40667					0.05228993716718833
LVIYNEKLK	9	Unmodified	_LVIYNEKLK_					0	0	0			REV__ENSG00000119285|ENST00000366582|HEATR1	REV__ENSG00000119285|ENST00000366582|HEATR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.34033203125	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	1	12871	12871		16.473	0.83134	1	4071000	+		35687	18347	23604	23613	40668	40668					0.11535748579581195
LVIYRILAVIL	11	Unmodified	_LVIYRILAVIL_					0	0	0			REV__nc|ENSG00000174953|Q9H2U1-3|DHX36	REV__nc|ENSG00000174953|Q9H2U1-3|DHX36	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4059448242188	2	643.433941	1284.85333	1.7741	0.0011415	2.0525	0.0013206	3.8265	0.0024621	643.9349087743328	105.87	0.24074	105.9	105.83	106.07	0.03833					9	5	2	0	0	0	0.17478	1	11568	11568		15.642	5.3766	1	58544	+		35688	22030	23605	23614	40669	40669					0.22229722361271342
LVKCDKFPTTK	11	Unmodified	_LVKCDKFPTTK_					0	0	0			REV__nc|ENSG00000153922|O14646-2|CHD1	REV__nc|ENSG00000153922|O14646-2|CHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3585815429688	2	640.357573	1278.70059	-1.1585	-0.00074183	3.0988	0.0019844	1.9404	0.0012425	640.3594398218631	99.341	2.5092	99.527	98.68	101.19	0.18581					187	58	4	0	0	0	0.67041	1	10376	10376		36.318	1.1394	1	585260	+		35689	20362	23606	23615	40670	40670					0.07239158902325471
LVKDPHSIIFL	11	Unmodified	_LVKDPHSIIFL_					0	0	0		ENSG00000139044|ENST00000266383|B4GALNT3;ENST00000535402.1_1_12:662343-670614:+|nuORF	ENSG00000139044|ENST00000266383|B4GALNT3	ENSG00000139044|ENST00000266383|B4GALNT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.3834228515625	2	641.381906	1280.74926	1.7204	0.0011035	1.3282	0.00085189	3.0487	0.0019554	641.3823801195498	102.44	0.7573	102.7	102.23	102.99	0.26322					53	19	4	0	0	0	0.73893	1	12433	12433		24.519	1.9395	1	2286900			35690	4344	23607	23616	40671	40671					0.12011395533750147
LVKFEKQF	8	Unmodified	_LVKFEKQF_					0	0	0			REV__ENST00000442007.1_1_6:73985509-73985899:+|nuORF	REV__ENST00000442007.1_1_6:73985509-73985899:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.77685546875	2	519.80276	1037.59097	0.47091	0.00024478	0.26786	0.00013923	0.73877	0.00038401	519.8022974159289	37.942	0.29394	38.255	37.98	38.274	0.31312					12	7	2	0	0	0	0.4196	1	3086	3086		17.365	3.5896	1	97284	+		35691	26763	23608	23617	40672	40672					0.07367521345327077
LVKFKPVFR	9	Unmodified	_LVKFKPVFR_					0	0	0			REV__ENSG00000128908|ENST00000648947|INO80	REV__ENSG00000128908|ENST00000648947|INO80	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.363525390625	2	567.363319	1132.71209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.044	1	69.109	68.609	69.609	0.065506								0	0	0	0.33559	1	6216	6216		45.952	10.334	1		+		35692	18798	23609	23618	40673	40673					0.1510376877863564
LVKGLIEP	8	Unmodified	_LVKGLIEP_					0	0	0			REV__ENST00000462138.5_1_3:53259639-53259759:-|nuORF	REV__ENST00000462138.5_1_3:53259639-53259759:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7802429199219	2	434.778754	867.542954	-0.61894	-0.0002691	3.8256	0.0016633	3.2067	0.0013942	434.7803762451805	34.577	0.94073	34.521	33.912	34.853	-0.056381					81	20	5	0	0	0	0.86791	1	2139	2139		28.254	1.4582	1	3842800	+		35693	27045	23610	23619	40674	40674					0.10388447425282266
LVKGTRRP	8	Unmodified	_LVKGTRRP_					0	0	0		ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8002624511719	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.84341	1	3396	3396		24.203	2.2429	1	1570500			35694	6282	23611	23620	40675	40675					0.1163659249950797
LVKKGENSV	9	Unmodified	_LVKKGENSV_					0	0	0		nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;ENSG00000065000|ENST00000643116|AP3D1;ENST00000589223.5_1_19:2102174-2111012:-|nuORF	nc|ENSG00000065000|O14617-3|AP3D1	nc|ENSG00000065000|O14617-3|AP3D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.283447265625	2	487.287474	972.560395	5.1261	0.0024979	-2.7688	-0.0013492	2.3574	0.0011487	487.28596820967346	109.12	0.19276	109.21	109.07	109.26	0.090057					14	7	3	0	0	0	0.67345	1	13289	13289		42.396	1.618	1	687170			35695	14763	23612	23621	40676	40676					0.07301742960282809
LVKKGSTT	8	Unmodified	_LVKKGSTT_					0	0	0			REV__nc|ENSG00000183638|Q8IWN7-2|RP1L1	REV__nc|ENSG00000183638|Q8IWN7-2|RP1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2584533691406	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.80706	1	561	561		19.36	5.2229	1	867930	+		35696	30087	23613	23622	40677	40677					0.07886686385802477
LVKKKKKKKK	10	Unmodified	_LVKKKKKKKK_					0	0	0		ENSG00000103550|ENST00000219837|KNOP1;ENST00000565844.1_1_16:19721758-19726357:-|nuORF;ENST00000263464.7_1_11:102193503-102193566:+|nuORF	ENSG00000103550|ENST00000219837|KNOP1	ENSG00000103550|ENST00000219837|KNOP1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.3161315917969	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.48	1	117.48	116.98	117.98	0								0	0	0	0.45132	1	12000	12000		0.5277	0	1				35697	2093	23614	23623	40678	40678					0.3054822610067731
LVKKKKKKKK	10	Unmodified	_LVKKKKKKKK_					0	0	0		ENSG00000103550|ENST00000219837|KNOP1;ENST00000565844.1_1_16:19721758-19726357:-|nuORF;ENST00000263464.7_1_11:102193503-102193566:+|nuORF	ENSG00000103550|ENST00000219837|KNOP1	ENSG00000103550|ENST00000219837|KNOP1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.3150634765625	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.34	1	118.34	117.84	118.84	0								0	0	0	0.45132	1	12057	12057		4.3388	0	1				35698	2093	23614	23623	40679	40679					0.3054822610067731
LVKKSDTGEQ	10	Unmodified	_LVKKSDTGEQ_					0	0	0			REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.8009643554688	2	552.798403	1103.58225	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.474	1	53.142	52.642	53.642	0.66729								0	0	0	0.43314	1	5278	5278		67.494	16.158	1		+		35699	18722	23615	23624	40680	40680					0.03460502918187558
LVKLYRFLARR	11	Unmodified	_LVKLYRFLARR_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3081970214844	3	478.973384	1433.89832	-0.69274	-0.0003318	2.9962	0.0014351	2.3035	0.0011033	478.9746813820608	49.583	2.3312	49.559	48.401	50.732	-0.024033					111	53	3	0	0	0	0.7896	1	4347	4347		13.508	7.1871	1	142150			35700	1089	23616	23625	40681	40681					0.19872965947138255
LVKMNVGGLT	10	Unmodified	_LVKMNVGGLT_					0	0	0			REV__nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	REV__nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7999267578125	2	516.299527	1030.5845	0.13063	6.7444E-05	1.7671	0.00091234	1.8977	0.00097978	516.3012953413697	57.209	1.6001	57.18	56.732	58.332	-0.028664					105	45	4	0	0	0	0.30722	1	5230	5230		71.877	13.096	1	661070	+		35701	20523	23617	23626	40682	40682					0.07043260122304673
LVKMTHIIGLN	11	Unmodified	_LVKMTHIIGLN_					0	0	0			REV__ENSG00000164296|ENST00000296736|TIGD6	REV__ENSG00000164296|ENST00000296736|TIGD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8698120117188	2	619.868108	1237.72166	-0.30615	-0.00018977	2.5077	0.0015545	2.2016	0.0013647	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.7434	1	10203	10203		23.523	4.1627	1	4796900	+		35702	21060	23618	23627	40683	40683					0.11231169001894159
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79620361328125	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.79929	4	4211	3942;4104;4200;4211		33.516	1.5607	1	1240000			35703	8309	23619	23628	40684;40685;40686;40687	40687					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79608154296875	2	491.795269	981.575986	-1.4502	-0.0007132	2.5925	0.001275	1.1423	0.00056177	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.80706	2	4697	4697;4817		33.516	14.156	1	1043600			35704	8309	23619	23628	40688;40689	40688					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.78192138671875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.009	1	80.009	79.509	80.509	0								0	0	0	0.29631	1	7374	7374		25.45	4.9683	1				35705	8309	23619	23628	40690	40690					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79583740234375	2	491.795269	981.575986	0.21767	0.00010705	0.41627	0.00020472	0.63394	0.00031177	491.79537288056144	45.526	1.3498	45.507	44.705	46.055	-0.018581					75	31	3	0	0	0	0.85277	1	3576	3576		25.45	1.2474	1	529090			35706	8309	23619	23628	40691	40691					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7962646484375	2	491.795269	981.575986	0.019467	9.5736E-06	1.1365	0.00055891	1.1559	0.00056849	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.85277	1	4369	4369		25.45	0	1	310050			35707	8309	23619	23628	40692	40692					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.796142578125	2	491.795269	981.575986	-0.035071	-1.7248E-05	1.1757	0.00057819	1.1406	0.00056094	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.87922	1	4972	4972		31.955	6.5047	1	1625300			35708	8309	23619	23628	40693	40693					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79547119140625	2	491.795269	981.575986	-0.86128	-0.00042357	1.3952	0.00068615	0.53392	0.00026258	491.79583711541846	45.285	1.262	45.254	44.708	45.97	-0.031067					74	28	3	0	0	0	0.80706	1	3702	3702		19.36	0	1	480390			35709	8309	23619	23628	40694	40694					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7948303222656	2	491.795269	981.575986	-0.64291	-0.00031618	1.7291	0.00085035	1.0862	0.00053417	491.79609453871643	50.642	0.51759	50.619	50.252	50.77	-0.02343					22	13	2	0	0	0	0.884	1	4403	4403		33.516	8.0654	1	333610			35710	8309	23619	23628	40695	40695					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7955017089844	2	491.795269	981.575986	-0.62954	-0.00030961	1.7556	0.00086339	1.126	0.00055378	491.79606037186466	51.204	1.5616	51.18	50.34	51.902	-0.02343					100	43	3	0	0	0	0.884	2	4458	4458;4468		50.025	11.218	1	394140			35711	8309	23619	23628	40696;40697	40696					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79559326171875	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.884	1	4633	4633		33.516	1.5607	1	792830			35712	8309	23619	23628	40698	40698					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7956237792969	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.884	1	4273	4273		33.516	0	1	1232600			35713	8309	23619	23628	40699	40699					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7953796386719	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.991	1	59.025	58.525	59.525	0.033905								0	0	0	0.29344	1	5430	5430		31.955	0	1				35714	8309	23619	23628	40700	40700					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7960510253906	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.141	1	59.175	58.675	59.675	0.033905								0	0	0	0.29755	1	5450	5450		24.203	4.8428	1				35715	8309	23619	23628	40701	40701					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7972412109375	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.189	1	60.222	59.722	60.722	0.032822								0	0	0	0.29631	1	5592	5592		25.45	1.2474	1				35716	8309	23619	23628	40702	40702					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79534912109375	2	491.795269	981.575986	-0.72436	-0.00035624	0.93415	0.00045941	0.20979	0.00010317	491.79558867203156	43.471	1.2464	43.477	42.933	44.179	0.0057487					50	30	2	0	0	0	0.87922	1	3010	3010		31.955	5.2619	1	198180			35717	8309	23619	23628	40703	40703					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7959289550781	2	491.795269	981.575986	-0.71044	-0.00034939	1.6504	0.00081164	0.93993	0.00046225	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.80706	2	4134	3984;4134		42.474	1.9018	1	571510			35718	8309	23619	23628	40704;40705	40705					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7962951660156	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.773	1	56.845	56.345	57.345	0.071835								0	0	0	0.30316	1	4786	4786		42.474	5.3154	1				35719	8309	23619	23628	40706	40706					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7951965332031	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.431	1	60.531	60.031	61.031	0.10082								0	0	0	0.30125	1	5227	5227		20.482	1.1219	1				35720	8309	23619	23628	40707	40707					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7961730957031	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.884	1	4100	4100		33.516	0	1	581270			35721	8309	23619	23628	40708	40708					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79498291015625	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.91005	1	4537	4537		42.474	11.971	1	2075300			35722	8309	23619	23628	40709	40709					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7964782714844	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.79929	1	4221	4221		18.324	0	1	412030			35723	8309	23619	23628	40710	40710					0.08446074267988024
LVKNFPKH	8	Unmodified	_LVKNFPKH_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79595947265625	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.86288	1	4673	4673		26.796	1.3459	1	1898900			35724	8309	23619	23628	40711	40711					0.08446074267988024
LVKNIVLIPIK	11	Unmodified	_LVKNIVLIPIK_					0	0	0			REV__ENST00000475789.1_1_7:89789075-89791404:+|nuORF	REV__ENST00000475789.1_1_7:89789075-89791404:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	625.433349609375	2	625.433941	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.92	1	108.94	108.44	109.44	0.020561								0	0	0	0.56276	1	11631	11631		14.137	11.208	1		+		35725	21100	23620	23629	40712	40712					0.23885722361251283
LVKPKKEYKRK	11	Unmodified	_LVKPKKEYKRK_					0	0	0			REV__nc|ENSG00000120616|Q9H2F5-3|EPC1	REV__nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.30633544921875	3	472.973161	1415.89765	-1.6394	-0.00077538	-2.945	-0.0013929	-4.5844	-0.0021683	472.9717127008119	49.434	3.3366	49.434	48.538	51.875	0					243	82	4	0	0	0	0.79476	1	4048	4048		12.433	0.50046	1	1017000	+		35726	18418	23621	23630	40713	40713					0.20634126507411565
LVKPPRPPCI	10	Unmodified	_LVKPPRPPCI_					0	0	0			REV__chr15:82987196-82987336|13|15.77|0.0|20.59|+|1|TE_info:AluSc8,AluSc8_dup17074,Alu,SINE,donor,-,82986922,82987196|None,RAMAC|2	REV__chr15:82987196-82987336|13|15.77|0.0|20.59|+|1|TE_info:AluSc8,AluSc8_dup17074,Alu,SINE,donor,-,82986922,82987196|None,RAMAC|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8424072265625	2	560.338987	1118.66342	3.1443	0.0017619	-0.76608	-0.00042927	2.3782	0.0013326	560.3384666398667	114.11	1.1832	114.09	113.68	114.86	-0.024452					78	42	3	0	0	0	0.86589	1	12703	12703		29.15	0	1	283760	+		35727	15624	23622	23631	40714	40714					0.10883532147249753
LVKQAAMI	8	Unmodified	_LVKQAAMI_					0	0	0			REV__ENSG00000143006|ENST00000371445|DMRTB1	REV__ENSG00000143006|ENST00000371445|DMRTB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26580810546875	2	437.264956	872.515359	0.61137	0.00026733	1.1908	0.00052067	1.8021	0.00078801	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.81724	1	929	929		14.664	0.88877	1	1313200	+		35728	19766	23623	23632	40715	40715					0.07400220893384812
LVKQKQPLP	9	Unmodified	_LVKQKQPLP_					0	0	0			REV__nc|ENSG00000172046|O94966|USP19	REV__nc|ENSG00000172046|O94966|USP19	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.2974243164062	2	525.837134	1049.65972	-0.50818	-0.00026722	2.5647	0.0013486	2.0565	0.0010814	526.3385863284026	58.113	0.33757	58.507	58.358	58.695	0.39408					10	7	2	0	0	0	0.20789	1	6059	6059		12.207	0.69583	1	69890	+		35729	30028	23624	23633	40716	40716					0.13687185645017053
LVKRILNFLMH	11	Unmodified	_LVKRILNFLMH_					0	0	0		ENSG00000124795|ENST00000652689|DEK;nc|ENSG00000124795|P35659-2|DEK;ENST00000512145.1_1_6:18237336-18256602:-|nuORF	ENSG00000124795|ENST00000652689|DEK	ENSG00000124795|ENST00000652689|DEK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.9481506347656	3	461.947959	1382.82205	2.7792	0.0012839	-2.0993	-0.00096978	0.67989	0.00031407	461.94697066502204	112.87	7.7849	112.84	112.19	119.97	-0.024811					433	277	2	0	0	0	0.76579	1	12498	12498		18.531	5.0231	1	2186600			35730	3363	23625	23634	40717	40717					0.14594826055508747
LVKRSYPNS	9	Unmodified	_LVKRSYPNS_					0	0	0			REV__nc|ENSG00000143164|Q58WW2|DCAF6	REV__nc|ENSG00000143164|Q58WW2|DCAF6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.1326293945312	2	532.298373	1062.58219	0.2599	0.00013834	-0.8092	-0.00043074	-0.5493	-0.00029239	532.2978280173436	32.261	1.17	32.255	31.805	32.975	-0.0061455					34	27	2	0	0	0	0.20789	1	1826	1826		39.253	15.05	1	57563	+		35731	19778	23626	23635	40718	40718					0.053405477088290354
LVKRSYPNS	9	Unmodified	_LVKRSYPNS_					0	0	0			REV__nc|ENSG00000143164|Q58WW2|DCAF6	REV__nc|ENSG00000143164|Q58WW2|DCAF6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	532.298373	1062.58219	0.18225	9.7013E-05	-0.55959	-0.00029787	-0.37734	-0.00020086	532.297922825313	32.218	0.87955	32.229	32.022	32.902	0.010899	-0.12539	-3.9238E-05	NaN	39.253	33	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70184	+		35732	19778	23626	23635							0.053405477088290354
LVKRSYPNS	9	Unmodified	_LVKRSYPNS_					0	0	0			REV__nc|ENSG00000143164|Q58WW2|DCAF6	REV__nc|ENSG00000143164|Q58WW2|DCAF6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	532.298373	1062.58219	0.21751	0.00011578	2.497	0.0013291	2.7145	0.0014449	532.2989733894846	32.468	0.24185	32.579	32.371	32.613	0.11117	0.22463	0.0032148	NaN	39.253	13	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110190	+		35733	19778	23626	23635							0.053405477088290354
LVKTDMEKL	9	Unmodified	_LVKTDMEKL_					0	0	0		nc|ENSG00000132294|Q14156-3|EFR3A;ENSG00000132294|ENST00000254624|EFR3A	nc|ENSG00000132294|Q14156-3|EFR3A	nc|ENSG00000132294|Q14156-3|EFR3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8084716796875	2	538.804642	1075.59473	2.2674	0.0012217	1.5354	0.00082726	3.8027	0.0020489	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.7932	1	9620	9620		23.042	0	1	835060			35734	3776	23627	23636	40719	40719					0.0599582305687818
LVKTHTRVFV	10	Unmodified	_LVKTHTRVFV_					0	0	0		ENST00000441047.1_1_17:51834352-51834658:-|nuORF	ENST00000441047.1_1_17:51834352-51834658:-|nuORF	ENST00000441047.1_1_17:51834352-51834658:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.58050537109375	3	400.580152	1198.71863	-0.18599	-7.4504E-05	0.94433	0.00037828	0.75834	0.00030378	400.5804645798546	111.38	0.175	111.32	111.2	111.37	-0.059937					8	4	2	0	0	0	0.85441	1	12125	12125		20.837	3.6704	1	1049500			35735	11779	23628	23637	40720	40720					0.12721661939326623
LVKTHTRVFV	10	Unmodified	_LVKTHTRVFV_					0	0	0		ENST00000441047.1_1_17:51834352-51834658:-|nuORF	ENST00000441047.1_1_17:51834352-51834658:-|nuORF	ENST00000441047.1_1_17:51834352-51834658:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.58038330078125	3	400.580152	1198.71863	3.1805	0.001274	-2.603	-0.0010427	0.57754	0.00023135	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.86698	1	12404	12404		28.081	2.9555	1	4827300			35736	11779	23628	23637	40721	40721					0.12721661939326623
LVKTPLKKP	9	Unmodified	_LVKTPLKKP_					0	0	0		chr17:61849256-61857058|58|31.62|0.89|5.15|-|0|BRIP1,BRIP1|1	chr17:61849256-61857058|58|31.62|0.89|5.15|-|0|BRIP1,BRIP1|1	chr17:61849256-61857058|58|31.62|0.89|5.15|-|0|BRIP1,BRIP1|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.9841613769531	2	512.349877	1022.6852	-0.31424	-0.000161	-0.65377	-0.00033496	-0.96802	-0.00049596	512.3498229890789	109.05	0.19034	109.17	109.03	109.22	0.12289					12	5	3	0	0	0	0.20789	1	11736	11736		10.866	3.6722	1	562150			35737	239	23629	23638	40722	40722					0.17476660167460523
LVKTPLKKP	9	Unmodified	_LVKTPLKKP_					0	0	0		chr17:61849256-61857058|58|31.62|0.89|5.15|-|0|BRIP1,BRIP1|1	chr17:61849256-61857058|58|31.62|0.89|5.15|-|0|BRIP1,BRIP1|1	chr17:61849256-61857058|58|31.62|0.89|5.15|-|0|BRIP1,BRIP1|1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	512.349877	1022.6852	5.6327	0.0028859	-5.8361	-0.0029901	-0.2034	-0.00010421	512.3468134015149	109.06	0.21528	109.15	109.04	109.26	0.090057	-0.011487	-0.0016502	NaN	10.866	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	603840			35738	239	23629	23638							0.17476660167460523
LVKVMHVHSA	10	Unmodified	_LVKVMHVHSA_					0	0	0		nc|ENSG00000270379|A2RTY3-5|HEATR9;nc|ENSG00000270379|A2RTY3-4|HEATR9;nc|ENSG00000270379|A2RTY3-3|HEATR9;ENSG00000270379|ENST00000604834|HEATR9	nc|ENSG00000270379|A2RTY3-5|HEATR9	nc|ENSG00000270379|A2RTY3-5|HEATR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8197631835938	2	560.818418	1119.62228	1.394	0.00078178	1.0555	0.00059192	2.4495	0.0013737	560.8189408405052	92.38	3.0704	92.425	91.102	94.172	0.045456					218	72	4	0	0	0	0.84112	1	9651	9651		37.159	9.2769	1	723720			35739	8974	23630	23639	40723	40723					0.06725771107767287
LVLAAILALL	10	Unmodified	_LVLAAILALL_					0	0	0		ENSG00000205133|ENST00000521988|TRIQK;ENST00000518400.5_1_8:93898852-93966708:-|nuORF	ENSG00000205133|ENST00000521988|TRIQK	ENSG00000205133|ENST00000521988|TRIQK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.353759765625	2	505.354628	1008.6947	0.83979	0.00042439	-3.2353	-0.001635	-2.3955	-0.0012106	505.3529105876311	52.187	0.98739	52.854	52.596	53.584	0.6673					38	23	3	0	0	0	0.86786	1	5236	5236		26.796	0	1	715370			35740	8513	23631	23640	40724	40724					0.19070428452971555
LVLAAWLYR	9	Unmodified	_LVLAAWLYR_					0	0	0			REV__ENSG00000158156|ENST00000373884|XKR8	REV__ENSG00000158156|ENST00000373884|XKR8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3365478515625	2	552.831852	1103.64915	-0.73053	-0.00040386	4.4831	0.0024784	3.7526	0.0020745	552.8344975147925	83.134	0.85608	83.134	82.73	83.586	0					37	21	2	0	0	0	0.7932	1	7795	7795		26.796	5.8492	1	88048	+		35741	20591	23632	23641	40725	40725					0.10147202990583537
LVLAEQLARS	10	Unmodified	_LVLAEQLARS_					0	0	0			REV__ENSG00000025708|ENST00000252029|TYMP	REV__ENSG00000025708|ENST00000252029|TYMP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.3272705078125	2	550.327131	1098.63971	0.84562	0.00046537	-0.71285	-0.0003923	0.13278	7.307E-05	550.3267482489723	100.06	1.2234	100.21	99.636	100.86	0.15073					67	27	3	0	0	0	0.86272	1	10450	10450		24.519	0	1	401350	+		35742	16258	23633	23642	40726	40726					0.09433389914420331
LVLAIGYRAS	10	Unmodified	_LVLAIGYRAS_					0	0	0			REV__nc|ENSG00000124564|O00476|SLC17A3	REV__nc|ENSG00000124564|O00476|SLC17A3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8168334960938	2	531.818941	1061.62333	-0.7527	-0.0004003	-3.1029	-0.0016502	-3.8556	-0.0020505	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.6116	7	8539	8445;8456;8539;8599;8611;8623;8707		49.442	3.6689	1	2790600	+		35743	18593	23634	23643	40727;40728;40729;40730;40731;40732;40733	40729					0.09498308748334239
LVLAIGYRAS	10	Unmodified	_LVLAIGYRAS_					0	0	0			REV__nc|ENSG00000124564|O00476|SLC17A3	REV__nc|ENSG00000124564|O00476|SLC17A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.816650390625	2	531.818941	1061.62333	-0.033207	-1.766E-05	-3.353	-0.0017832	-3.3862	-0.0018009	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.80179	2	8652	8652;8711		39.253	11.371	1	1254600	+		35744	18593	23634	23643	40734;40735	40734					0.09498308748334239
LVLAIGYRAS	10	Unmodified	_LVLAIGYRAS_					0	0	0			REV__nc|ENSG00000124564|O00476|SLC17A3	REV__nc|ENSG00000124564|O00476|SLC17A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.80179	2	9190	9011;9190		39.253	4.9302	1	4208000	+		35745	18593	23634	23643	40736;40737	40737					0.09498308748334239
LVLAIGYRAS	10	Unmodified	_LVLAIGYRAS_					0	0	0			REV__nc|ENSG00000124564|O00476|SLC17A3	REV__nc|ENSG00000124564|O00476|SLC17A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.81689453125	2	531.818941	1061.62333	-0.04786	-2.5453E-05	-3.9998	-0.0021272	-4.0476	-0.0021526	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.57924	7	8902	8664;8698;8710;8722;8842;8902;8951		51.193	17.02	1	4916300	+		35746	18593	23634	23643	40738;40739;40740;40741;40742;40743;40744	40743					0.09498308748334239
LVLAIGYRAS	10	Unmodified	_LVLAIGYRAS_					0	0	0			REV__nc|ENSG00000124564|O00476|SLC17A3	REV__nc|ENSG00000124564|O00476|SLC17A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8169555664062	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.82886	1	8494	8494		37.812	0.65241	1	1159800	+		35747	18593	23634	23643	40745	40745					0.09498308748334239
LVLAIGYRAS	10	Unmodified	_LVLAIGYRAS_					0	0	0			REV__nc|ENSG00000124564|O00476|SLC17A3	REV__nc|ENSG00000124564|O00476|SLC17A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8169555664062	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.77314	3	8639	8628;8639;8747		40.778	3.6629	1	4022300	+		35748	18593	23634	23643	40746;40747;40748	40747					0.09498308748334239
LVLAIGYRAS	10	Unmodified	_LVLAIGYRAS_					0	0	0			REV__nc|ENSG00000124564|O00476|SLC17A3	REV__nc|ENSG00000124564|O00476|SLC17A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8170166015625	2	531.818941	1061.62333	-1.264	-0.00067223	-2.5284	-0.0013447	-3.7925	-0.0020169	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.64457	1	10355	10355		47.657	5.2612	1	4586300	+		35749	18593	23634	23643	40749	40749					0.09498308748334239
LVLAIPLRVLV	11	Unmodified	_LVLAIPLRVLV_					0	0	0		ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	603.4168090820312	2	603.420834	1204.82712	-0.17205	-0.00010382	-2.6886	-0.0016223	-2.8606	-0.0017262	603.4191868743197	108.95	0.53123	108.98	108.69	109.22	0.034355					45	25	2	0	0	0	0.80516	1	11982	11982		10.265	3.9526	1	3070200			35750	8541	23635	23644	40750	40750					0.23289453189795495
LVLAIPLRVLV	11	Unmodified	_LVLAIPLRVLV_					0	0	0		ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	603.420834	1204.82712	-0.17393	-0.00010495	-1.1672	-0.00070433	-1.3412	-0.00080929	603.4213442459148	108.78	0.056808	108.78	108.74	108.79	0	-0.15804	0.0041631	NaN	10.265	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	439790			35751	8541	23635	23644							0.23289453189795495
LVLAIPLRVLV	11	Unmodified	_LVLAIPLRVLV_					0	0	0		ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	603.420834	1204.82712	0.9035	0.00054519	-4.5497	-0.0027454	-3.6462	-0.0022002	603.4173957221998	108.93	0.48659	109.01	108.72	109.2	0.078552	0.068358	8.0937E-05	NaN	10.265	27	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1211900			35752	8541	23635	23644							0.23289453189795495
LVLAIPLRVLV	11	Unmodified	_LVLAIPLRVLV_					0	0	0		ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	603.420834	1204.82712	-1.2783	-0.00077137	-1.8846	-0.0011372	-3.1629	-0.0019086	603.4194716580663	108.92	0.42003	108.94	108.73	109.15	0.020569	-0.0027193	0.0032973	NaN	10.265	37	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1121100			35753	8541	23635	23644							0.23289453189795495
LVLAIPLRVLV	11	Unmodified	_LVLAIPLRVLV_					0	0	0		ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	603.420834	1204.82712	5.1325	0.0030971	-7.179	-0.0043319	-2.0464	-0.0012349	603.4166280827543	108.91	0.45975	109	108.75	109.21	0.09005	0.052882	-0.0030921	NaN	10.265	36	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1460200			35754	8541	23635	23644							0.23289453189795495
LVLAKSEL	8	Unmodified	_LVLAKSEL_					0	0	0		ENST00000360830.8_1_10:79797045-79800384:+|nuORF	ENST00000360830.8_1_10:79797045-79800384:+|nuORF	ENST00000360830.8_1_10:79797045-79800384:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.77490234375	2	436.776211	871.537869	-1.136	-0.00049617	-1.8731	-0.00081814	-3.0091	-0.0013143	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.87922	2	8886	8886;8935		31.955	0	1	8774400			35755	10457	23636	23645	40751;40752	40751					0.09696143562666748
LVLAKSEL	8	Unmodified	_LVLAKSEL_					0	0	0		ENST00000360830.8_1_10:79797045-79800384:+|nuORF	ENST00000360830.8_1_10:79797045-79800384:+|nuORF	ENST00000360830.8_1_10:79797045-79800384:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7747802734375	2	436.776211	871.537869	-0.16229	-7.0884E-05	-2.9337	-0.0012814	-3.096	-0.0013523	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.87922	2	9309	9309;9381		40.573	0	1	15341000			35756	10457	23636	23645	40753;40754	40753					0.09696143562666748
LVLAKSEL	8	Unmodified	_LVLAKSEL_					0	0	0		ENST00000360830.8_1_10:79797045-79800384:+|nuORF	ENST00000360830.8_1_10:79797045-79800384:+|nuORF	ENST00000360830.8_1_10:79797045-79800384:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.7748718261719	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.87922	2	9101	9101;9125		31.955	0	1	13819000			35757	10457	23636	23645	40755;40756	40755					0.09696143562666748
LVLAKTVWLLL	11	Unmodified	_LVLAKTVWLLL_					0	0	0			REV__nc|ENSG00000155229|Q96T76-8|MMS19	REV__nc|ENSG00000155229|Q96T76-8|MMS19	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8928833007812	2	634.920667	1267.82678	-0.0080683	-5.1227E-06	2.5243	0.0016027	2.5162	0.0015976	634.9222014964918	105.7	0.12865	105.7	105.59	105.72	0					4	2	2	0	0	0	0.1729	1	10921	10921		26.693	2.1737	1	41265	+		35758	29945	23637	23646	40757	40757					0.20358033469938164
LVLALADIVWR	11	Unmodified	_LVLALADIVWR_					0	0	0		ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8927612304688	2	634.889898	1267.76524	-0.0069402	-4.4063E-06	4.0361	0.0025625	4.0292	0.0025581	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.53495	2	11005	11005;11163		49.442	16.629	1	31286000			35759	2282	23638	23647	40758;40759	40758					0.14207101770648478
LVLALADIVWR	11	Unmodified	_LVLALADIVWR_					0	0	0		ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8929443359375	2	634.889898	1267.76524	-0.13084	-8.307E-05	4.2165	0.002677	4.0856	0.0025939	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.53495	4	11457	11457;11555;11579;11591		49.442	6.6056	1	40768000			35760	2282	23638	23647	40760;40761;40762;40763	40760					0.14207101770648478
LVLALADIVWR	11	Unmodified	_LVLALADIVWR_					0	0	0		ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.8927612304688	2	634.889898	1267.76524	2.7957	0.0017749	1.1766	0.000747	3.9722	0.0025219	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.5603	3	11709	11709;11733;11807		47.657	4.3314	1	42597000			35761	2282	23638	23647	40764;40765;40766	40764					0.14207101770648478
LVLALADIVWR	11	Unmodified	_LVLALADIVWR_					0	0	0		ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.892822265625	2	634.889898	1267.76524	1.3476	0.00085558	2.8664	0.0018198	4.214	0.0026754	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.43408	4	11597	11597;11609;11621;11645		56.721	8.7615	1	42647000			35762	2282	23638	23647	40767;40768;40769;40770	40767					0.14207101770648478
LVLALADIVWR	11	Unmodified	_LVLALADIVWR_					0	0	0		ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8932495117188	2	634.889898	1267.76524	1.4999	0.00095225	2.3399	0.0014856	3.8398	0.0024378	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.53495	3	11358	11214;11346;11358		49.442	5.6261	1	68597000			35763	2282	23638	23647	40771;40772;40773	40773					0.14207101770648478
LVLALADIVWR	11	Unmodified	_LVLALADIVWR_					0	0	0		ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8926391601562	2	634.889898	1267.76524	0.93451	0.00059331	2.8473	0.0018077	3.7818	0.002401	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.43408	5	11273	11273;11285;11309;11321;11371		56.721	17.468	1	69492000			35764	2282	23638	23647	40774;40775;40776;40777;40778	40774					0.14207101770648478
LVLAMKAQ	8	Unmodified	_LVLAMKAQ_					0	0	0			REV__ENSG00000074755|ENST00000381638|ZZEF1	REV__ENSG00000074755|ENST00000381638|ZZEF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.7666320800781	2	437.264956	872.515359	0.72217	0.00031578	1.2532	0.00054797	1.9754	0.00086375	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.82464	1	659	659		21.702	6.0661	1	944940	+		35765	16695	23639	23648	40779	40779					0.07400220893396181
LVLARLKPLD	10	Unmodified	_LVLARLKPLD_					0	0	0			REV__ENSG00000010626|ENST00000443597|LRRC23	REV__ENSG00000010626|ENST00000443597|LRRC23	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.853271484375	2	569.371341	1136.72813	0.87015	0.00049544	-1.6373	-0.00093222	-0.76713	-0.00043678	569.3705033527806	102.07	0.34724	102.2	102.06	102.41	0.13523					14	8	2	0	0	0	0.37624	1	10756	10756		26.693	5.746	1	210360	+		35766	16169	23640	23649	40780	40780					0.1652343022487912
LVLATQMSRPT	11	Unmodified	_LVLATQMSRPT_					0	0	0		ENST00000560523.5_1_15:70964229-70991966:-|nuORF;nc|ENSG00000137831|Q9BZF9-2|UACA;ENSG00000137831|ENST00000322954|UACA	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	608.8375854492188	2	608.839548	1215.66454	-1.2606	-0.00076749	-2.4887	-0.0015152	-3.7492	-0.0022827	608.8379314653004	110.3	0.94635	110.3	110.1	111.04	-0.0074387					59	30	4	0	0	0	0.7434	1	11756	11756		23.523	0.48021	1	2774900			35767	4240	23641	23650	40781	40781					0.06533701725470564
LVLAVLLMPAR	11	Unmodified	_LVLAVLLMPAR_					0	0	0			REV__ENSG00000162040|ENST00000454677|HS3ST6	REV__ENSG00000162040|ENST00000454677|HS3ST6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.8826904296875	2	598.383394	1194.75224	-2.4045	-0.0014388	-0.91448	-0.00054721	-3.319	-0.001986	598.3827122218626	40.848	1.3552	40.855	40.235	41.59	0.0065727					86	35	3	0	0	0	0.75495	1	3031	3031		20.947	0	1	583190	+		35768	20792	23642	23651	40782	40782					0.16264947386889617
LVLAVPLRVL	10	Unmodified	_LVLAVPLRVL_					0	0	0		ENSG00000160539|ENST00000372264|PLPP7	ENSG00000160539|ENST00000372264|PLPP7	ENSG00000160539|ENST00000372264|PLPP7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.84033203125	2	546.878802	1091.74305	0.1942	0.0001062	-1.7055	-0.00093272	-1.5113	-0.00082652	546.8778756773676	100.56	0.21496	100.78	100.59	100.81	0.21511					6	4	2	0	0	0	0.37624	1	10490	10490		29.15	0	1	70271			35769	5592	23643	23652	40783	40783					0.20084922092883062
LVLAVSLELMH	11	Unmodified	_LVLAVSLELMH_					0	0	0		ENST00000591531.1_1_19:37264096-37264246:+|nuORF;ENST00000590750.1_1_19:37264078-37266412:+|nuORF	ENST00000591531.1_1_19:37264096-37264246:+|nuORF	ENST00000591531.1_1_19:37264096-37264246:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.8796997070312	2	612.854667	1223.69478	0.28835	0.00017672	1.4976	0.00091784	1.786	0.0010946	612.8577250410867	104.54	0.52631	104.58	104.38	104.91	0.039864					19	12	3	0	0	0	0.1753	1	11411	11411		44.117	21.074	1	164390			35770	14263	23644	23653	40784	40784					0.09188060390647479
LVLAVTVTS	9	Unmodified	_LVLAVTVTS_					0	0	0		ENSG00000174130|ENST00000508254|TLR6;ENSG00000174125|ENST00000308979|TLR1	ENSG00000174130|ENST00000508254|TLR6	ENSG00000174130|ENST00000508254|TLR6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.7802429199219	2	451.781493	901.548434	-1.2361	-0.00055844	-1.7789	-0.00080368	-3.015	-0.0013621	451.78060040496564	86.527	1.3161	86.721	86.176	87.492	0.19379					78	30	4	0	0	0	0.78058	1	8533	8533		30.504	0	1	231810			35771	6909	23645	23654	40785	40785					0.09372126217101595
LVLAVTVTS	9	Unmodified	_LVLAVTVTS_					0	0	0		ENSG00000174130|ENST00000508254|TLR6;ENSG00000174125|ENST00000308979|TLR1	ENSG00000174130|ENST00000508254|TLR6	ENSG00000174130|ENST00000508254|TLR6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.77984619140625	2	451.781493	901.548434	0.62853	0.00028396	-3.3335	-0.001506	-2.705	-0.0012221	451.77981723466957	86.544	1.1511	86.693	86.36	87.511	0.14902					59	26	3	0	0	0	0.7932	1	8514	8514		26.796	0	1	150120			35772	6909	23645	23654	40786	40786					0.09372126217101595
LVLAVWGRF	9	Unmodified	_LVLAVWGRF_					0	0	0			REV__nc|ENSG00000214022|Q9BWE0|REPIN1	REV__nc|ENSG00000214022|Q9BWE0|REPIN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8204956054688	2	530.818744	1059.62294	0.37544	0.00019929	4.1567	0.0022064	4.5321	0.0024057	530.8207758612427	79.518	0.93618	79.934	79.317	80.253	0.41621					53	21	3	0	0	0	0.77546	1	9081	9081		31.955	0.42505	1	1028200	+		35773	23644	23646	23655	40787	40787					0.09550933819127749
LVLCFIGY	8	Unmodified	_LVLCFIGY_					0	0	0			REV__ENSG00000105671|ENST00000247003|DDX49;REV__ENST00000599373.5_1_19:19030550-19032753:+|nuORF	REV__ENSG00000105671|ENST00000247003|DDX49	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.253662109375	2	464.254057	926.493561	-0.12089	-5.6125E-05	0.051606	2.3958E-05	-0.069287	-3.2167E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.91333	1	7996	7996		43.626	10.133	1	1449300	+		35774	17560;29297	23647	23656	40788	40788					0.02737416144816507
LVLCRLLPPSA	11	Carbamidomethyl (C)	_LVLC(Carbamidomethyl (C))RLLPPSA_	LVLC(1)RLLPPSA		LVLC(43)RLLPPSA		0	1	0			REV__ENSG00000108828|ENST00000355653|VAT1	REV__ENSG00000108828|ENST00000355653|VAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.868896484375	2	619.868108	1237.72166	-0.30633	-0.00018988	2.1414	0.0013274	1.8351	0.0011375	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.61369	1	9745	9745		42.864	7.7122	1	2103100	+		35775	17734	23648	23657	40789	40789	231				0.11231169001871422
LVLCRLLPPSA	11	Carbamidomethyl (C)	_LVLC(Carbamidomethyl (C))RLLPPSA_	LVLC(1)RLLPPSA		LVLC(44)RLLPPSA		0	1	0			REV__ENSG00000108828|ENST00000355653|VAT1	REV__ENSG00000108828|ENST00000355653|VAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8690795898438	2	619.868108	1237.72166	-0.30615	-0.00018977	2.5077	0.0015545	2.2016	0.0013647	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.60058	1	10037	10037		44.377	12.743	1	4796900	+		35776	17734	23648	23657	40790	40790	231				0.11231169001871422
LVLCRLLPPSA	11	Carbamidomethyl (C)	_LVLC(Carbamidomethyl (C))RLLPPSA_	LVLC(1)RLLPPSA		LVLC(46)RLLPPSA		0	1	0			REV__ENSG00000108828|ENST00000355653|VAT1	REV__ENSG00000108828|ENST00000355653|VAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8694458007812	2	619.868108	1237.72166	0.62564	0.00038782	1.5453	0.00095786	2.1709	0.0013457	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.58425	1	10302	10302		45.972	14.442	1	4779100	+		35777	17734	23648	23657	40791	40791	231				0.11231169001871422
LVLCRLLPPSA	11	Carbamidomethyl (C)	_LVLC(Carbamidomethyl (C))RLLPPSA_	LVLC(1)RLLPPSA		LVLC(44)RLLPPSA		0	1	0			REV__ENSG00000108828|ENST00000355653|VAT1	REV__ENSG00000108828|ENST00000355653|VAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.86962890625	2	619.868108	1237.72166	1.2689	0.00078657	0.89125	0.00055246	2.1602	0.001339	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.60058	1	9991	9991		44.377	12.422	1	6493200	+		35778	17734	23648	23657	40792	40792	231				0.11231169001871422
LVLDEPSTKQS	11	Unmodified	_LVLDEPSTKQS_					0	0	0		ENSG00000118096|ENST00000264021|IFT46;ENST00000531201.5_1_11:118415633-118427808:-|nuORF;nc|ENSG00000118096|Q9NQC8-2|IFT46	ENSG00000118096|ENST00000264021|IFT46	ENSG00000118096|ENST00000264021|IFT46	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5645446777344	3	406.218837	1215.63468	1.4507	0.0005893	4.33	0.0017589	5.7807	0.0023482	406.22081781856724	59.138	0.94968	59.172	58.743	59.692	0.033905					37	25	2	0	0	0	0.17521	1	5519	5519		17.167	0	1	57257			35779	3011	23649	23658	40793	40793					0.03549041261135244
LVLDLLTMTQN	11	Unmodified	_LVLDLLTMTQN_					0	0	0		ENST00000397473.6_1_13:99908596-99908695:-|nuORF	ENST00000397473.6_1_13:99908596-99908695:-|nuORF	ENST00000397473.6_1_13:99908596-99908695:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	630.8501586914062	2	630.847039	1259.67952	-0.029329	-1.8502E-05	4.3944	0.0027722	4.3651	0.0027537	630.849677894081	111.25	1.2557	111.25	110.42	111.68	0					88	39	3	0	0	0	0.67778	1	11551	11551		35.152	8.4591	1	207570			35780	11151	23650	23659	40794	40794					0.06007148802837037
LVLEELPGL	9	Unmodified	_LVLEELPGL_					0	0	0		ENST00000580840.1_2_17:29227507-29227552:-|nuORF	ENST00000580840.1_2_17:29227507-29227552:-|nuORF	ENST00000580840.1_2_17:29227507-29227552:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7978515625	2	491.794601	981.574648	-1.1119	-0.00054683	3.7985	0.0018681	2.6866	0.0013213	491.79642278746286	73.027	0.75407	73.11	72.701	73.455	0.083138					42	26	2	0	0	0	0.58151	1	6683	6683		47.916	7.343	1	82376			35781	14100	23651	23660	40795	40795					0.08312395388554705
LVLEGLESEA	10	Unmodified	_LVLEGLESEA_					0	0	0		ENSG00000274211|ENST00000612932|SOCS7;nc|ENSG00000274211|O14512|SOCS7	ENSG00000274211|ENST00000612932|SOCS7	ENSG00000274211|ENST00000612932|SOCS7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2806396484375	2	530.282054	1058.54956	-0.095666	-5.073E-05	0.071104	3.7705E-05	-0.024561	-1.3024E-05	530.2819114752125	76.375	0.64755	76.5	76.185	76.833	0.12485					36	21	2	0	0	0	0.71042	1	7162	7162		44.117	3.3386	1	146950			35782	8993	23652	23661	40796	40796					0.02262295795344471
LVLEILYML	9	Unmodified	_LVLEILYML_					0	0	0		ENST00000506256.5_1_6:97707503-97720651:-|nuORF;ENST00000511335.5_1_6:97715738-97720957:-|nuORF;ENST00000509383.5_1_6:97679279-97717985:-|nuORF;ENST00000508976.5_1_6:97702357-97730353:-|nuORF;ENSG00000146263|ENST00000683635|MMS22L	ENST00000506256.5_1_6:97707503-97720651:-|nuORF	ENST00000506256.5_1_6:97707503-97720651:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8296508789062	2	553.830129	1105.6457	1.198	0.00066348	-1.3642	-0.00075551	-0.16618	-9.2035E-05	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.76996	1	8990	8990		33.516	1.5607	1	1689700			35783	4831	23653	23662	40797	40797					0.09710772101743714
LVLELQKVKQ	10	Unmodified	_LVLELQKVKQ_					0	0	0		ENSG00000015133|ENST00000389857|CCDC88C	ENSG00000015133|ENST00000389857|CCDC88C	ENSG00000015133|ENST00000389857|CCDC88C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.38037109375	2	599.381906	1196.74926	-1.2913	-0.00077396	-1.7358	-0.0010404	-3.0271	-0.0018144	599.3806932084216	103.36	2.8938	103.47	103.07	105.96	0.11494					245	72	6	0	0	0	0.86718	1	10913	10913		27.882	2.3082	1	20299000			35784	820	23654	23663	40798	40798					0.15875395533748815
LVLEPEKQMLL	11	Unmodified	_LVLEPEKQMLL_					0	0	0		nc|ENSG00000127507|Q9UHX3-5|ADGRE2;nc|ENSG00000127507|Q9UHX3-4|ADGRE2;nc|ENSG00000127507|Q9UHX3-6|ADGRE2;nc|ENSG00000127507|Q9UHX3-3|ADGRE2;nc|ENSG00000127507|Q9UHX3-2|ADGRE2;ENSG00000127507|ENST00000315576|ADGRE2	nc|ENSG00000127507|Q9UHX3-5|ADGRE2	nc|ENSG00000127507|Q9UHX3-5|ADGRE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2594299316406	3	438.256346	1311.74721	-0.33086	-0.000145	3.4333	0.0015047	3.1024	0.0013597	438.2577888562839	29.898	1.7233	29.855	29.533	31.256	-0.043093					114	42	4	0	0	0	0.71803	1	1645	1645		28.577	1.5294	1	610700			35785	3501	23655	23664	40799	40799					0.10380598733627266
LVLFLFALSW	10	Unmodified	_LVLFLFALSW_					0	0	0		ENSG00000282608|ENST00000241356|ADORA3	ENSG00000282608|ENST00000241356|ADORA3	ENSG00000282608|ENST00000241356|ADORA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.860595703125	2	604.857535	1207.70052	1.1113	0.00067218	3.2318	0.0019548	4.3431	0.002627	604.8592159169697	15.5	0.18124	15.476	15.385	15.567	-0.024206					6	4	2	0	0	0	0.85834	1	44	44		11.511	1.8054	1	43993			35786	9053	23656	23665	40800	40800					0.10497526964672943
LVLFSLVEPV	10	Unmodified	_LVLFSLVEPV_					0	0	0		ENST00000344120.4_1_5:141690563-141690701:-|nuORF	ENST00000344120.4_1_5:141690563-141690701:-|nuORF	ENST00000344120.4_1_5:141690563-141690701:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.8301391601562	2	558.339175	1114.6638	1.3524	0.00075511	3.3011	0.0018431	4.6535	0.0025982	558.3418492368064	100.56	0.38811	100.61	100.43	100.82	0.046356					10	8	2	0	0	0	0.37624	1	10826	10826		21.96	0	1	34634			35787	10288	23657	23666	40801	40801					0.1110523034808466
LVLFSRRPAVK	11	Unmodified	_LVLFSRRPAVK_					0	0	0			REV__ENST00000466449.5_1_18:77690306-77703530:-|nuORF	REV__ENST00000466449.5_1_18:77690306-77703530:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4052734375	2	643.408789	1284.80303	0.024155	1.5542E-05	-4.3274	-0.0027843	-4.3033	-0.0027688	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.7342	1	11079	11079		25.574	0	1	11188000	+		35788	27131	23658	23667	40802	40802					0.17201612756116447
LVLFSRRPAVK	11	Unmodified	_LVLFSRRPAVK_					0	0	0			REV__ENST00000466449.5_1_18:77690306-77703530:-|nuORF	REV__ENST00000466449.5_1_18:77690306-77703530:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4054565429688	2	643.408789	1284.80303	-0.02909	-1.8717E-05	-4.0142	-0.0025828	-4.0433	-0.0026015	643.4061904455084	108.99	0.30328	108.94	108.83	109.14	-0.049324					24	14	2	0	0	0	0.74763	1	11884	11884		22.58	1.6327	1	669600	+		35789	27131	23658	23667	40803	40803					0.17201612756116447
LVLFSRRPAVK	11	Unmodified	_LVLFSRRPAVK_					0	0	0			REV__ENST00000466449.5_1_18:77690306-77703530:-|nuORF	REV__ENST00000466449.5_1_18:77690306-77703530:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.40576171875	2	643.408789	1284.80303	-1.1464	-0.0007376	-3.4117	-0.0021951	-4.5581	-0.0029327	643.406459620359	105.63	1.1927	105.7	104.97	106.16	0.073112					153	29	6	0	0	0	0.69995	1	11153	11153		31.53	5.9558	1	22367000	+		35790	27131	23658	23667	40804	40804					0.17201612756116447
LVLFSRRPAVK	11	Unmodified	_LVLFSRRPAVK_					0	0	0			REV__ENST00000466449.5_1_18:77690306-77703530:-|nuORF	REV__ENST00000466449.5_1_18:77690306-77703530:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	643.408789	1284.80303	-0.02909	-1.8717E-05	-4.0142	-0.0025828	-4.0433	-0.0026015	643.4061904455084	108.99	0.30328	108.94	108.83	109.14	-0.049324	-0.092297	0.00079708	NaN	22.58	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	669600	+		35791	27131	23658	23667							0.17201612756116447
LVLFSRRPAVK	11	Unmodified	_LVLFSRRPAVK_					0	0	0			REV__ENST00000466449.5_1_18:77690306-77703530:-|nuORF	REV__ENST00000466449.5_1_18:77690306-77703530:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	643.408789	1284.80303	1.6035	0.0010317	-5.4083	-0.0034797	-3.8048	-0.002448	643.4052205148413	109	0.75179	109.13	108.51	109.26	0.13026	0.092297	-0.00099689	NaN	22.58	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	712840	+		35792	27131	23658	23667							0.17201612756116447
LVLGGLPILG	10	Unmodified	_LVLGGLPILG_					0	0	0		ENSG00000267534|ENST00000646641|S1PR2	ENSG00000267534|ENST00000646641|S1PR2	ENSG00000267534|ENST00000646641|S1PR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.3177185058594	2	476.315503	950.616454	0.029689	1.4142E-05	2.667	0.0012703	2.6967	0.0012845	476.31657503458547	33.477	0.88025	33.48	33.124	34.005	0.0030785					30	20	2	0	0	0	0.87636	1	1959	1959		12.959	0	1	36331			35793	8958	23659	23668	40805	40805					0.1391699586777122
LVLGLGVTT	9	Unmodified	_LVLGLGVTT_					0	0	0			REV__ENSG00000197496|ENST00000359271|SLC2A10	REV__ENSG00000197496|ENST00000359271|SLC2A10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7746276855469	2	436.776211	871.537869	-1.136	-0.00049617	-1.8731	-0.00081814	-3.0091	-0.0013143	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.5393	2	9022	8984;9022		50.025	2.1089	1	8774400	+		35794	23238	23660	23669	40806;40807	40807					0.09696143562666748
LVLGLGVTT	9	Unmodified	_LVLGLGVTT_					0	0	0			REV__ENSG00000197496|ENST00000359271|SLC2A10	REV__ENSG00000197496|ENST00000359271|SLC2A10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7749328613281	2	436.776211	871.537869	-0.16229	-7.0884E-05	-2.9337	-0.0012814	-3.096	-0.0013523	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.77546	1	9288	9288		31.955	0	1	15341000	+		35795	23238	23660	23669	40808	40808					0.09696143562666748
LVLGLVIR	8	Unmodified	_LVLGLVIR_					0	0	0		ENST00000484370.5_1_8:38285608-38286836:-|nuORF	ENST00000484370.5_1_8:38285608-38286836:-|nuORF	ENST00000484370.5_1_8:38285608-38286836:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.80938720703125	2	441.810388	881.606223	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.784	1	20.325	19.825	20.825	-0.4591								0	0	0	0.30674	1	691	691		15.636	0	1				35796	12535	23661	23670	40809	40809					0.1606843293318434
LVLGLVPGARA	11	Unmodified	_LVLGLVPGARA_					0	0	0			REV__nc|ENSG00000159433|Q9P2P6-3|STARD9	REV__nc|ENSG00000159433|Q9P2P6-3|STARD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.3399047851562	2	533.342584	1064.67061	-1.5064	-0.00080343	-2.9287	-0.001562	-4.4351	-0.0023654	533.3409139496441	99.132	2.1048	99.317	98.763	100.87	0.18582					141	48	4	0	0	0	0.72918	1	10286	10286		26.693	3.6504	1	1837700	+		35797	29961	23662	23671	40810	40810					0.1408658801931324
LVLGNRKHTIS	11	Unmodified	_LVLGNRKHTIS_					0	0	0		ENSG00000135926|ENST00000258412|TMBIM1	ENSG00000135926|ENST00000258412|TMBIM1	ENSG00000135926|ENST00000258412|TMBIM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8737182617188	2	619.372404	1236.73025	-1.2262	-0.00075948	0.2128	0.0001318	-1.0134	-0.00062768	619.3724290211392	101.55	1.3094	101.7	101.32	102.63	0.15505					84	32	4	0	0	0	0.7434	1	10648	10648		23.523	1.5628	1	1786600			35798	4070	23663	23672	40811	40811					0.121358589627107
LVLGVLGTAAF	11	Unmodified	_LVLGVLGTAAF_					0	0	0		ENSG00000158156|ENST00000373884|XKR8	ENSG00000158156|ENST00000373884|XKR8	ENSG00000158156|ENST00000373884|XKR8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8208618164062	2	530.823692	1059.63283	-1.2397	-0.00065807	-4.086	-0.002169	-5.3257	-0.002827	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.67493	1	7582	7582		35.618	3.6634	1	869100			35799	5463	23664	23673	40812	40812					0.10540077033851958
LVLHALRRLR	10	Unmodified	_LVLHALRRLR_					0	0	0			REV__ENSG00000165716|ENST00000371692|DIPK1B	REV__ENSG00000165716|ENST00000371692|DIPK1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.917724609375	2	623.914573	1245.81459	2.3391	0.0014594	0.95505	0.00059587	3.2942	0.0020553	623.9150348689084	109.89	1.4015	109.95	109.45	110.85	0.067932					103	58	2	0	0	0	0.8488	1	13306	13306		17.365	5.8539	1	709500	+		35800	21209	23665	23674	40813	40813					0.2015185457012194
LVLHGNNLLVF	11	Unmodified	_LVLHGNNLLVF_					0	0	0		nc|ENSG00000128607|Q6PID8-2|KLHDC10;ENSG00000128607|ENST00000335420|KLHDC10	nc|ENSG00000128607|Q6PID8-2|KLHDC10	nc|ENSG00000128607|Q6PID8-2|KLHDC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.869140625	2	619.866423	1237.71829	1.6172	0.0010025	2.9706	0.0018414	4.5878	0.0028438	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.7342	1	11273	11273		25.574	0	1	1541100			35801	3553	23666	23675	40814	40814					0.10894242219501393
LVLHLLSKP	9	Unmodified	_LVLHLLSKP_					0	0	0			REV__nc|ENSG00000106823|O94769-2|ECM2	REV__nc|ENSG00000106823|O94769-2|ECM2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.33197021484375	2	510.334227	1018.6539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.98	1	18.046	17.546	18.546	0.066298								0	0	0	0.31117	1	290	290		26.693	6.6961	1		+		35802	17633	23667	23676	40815	40815					0.14532087133363802
LVLHWWSV	8	Unmodified	_LVLHWWSV_					0	0	0		ENST00000274026.9_1_4:122737919-122737976:-|nuORF	ENST00000274026.9_1_4:122737919-122737976:-|nuORF	ENST00000274026.9_1_4:122737919-122737976:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.31103515625	2	520.28982	1038.56509	-0.46176	-0.00024025	3.5348	0.0018391	3.0731	0.0015989	520.2919496668699	47.594	0.18589	48.065	47.935	48.121	0.47139					7	4	2	0	0	0	0.4196	1	4529	4529		28.254	2.8041	1	272420			35803	9583	23668	23677	40816	40816					0.047346718936978505
LVLIFRNW	8	Unmodified	_LVLIFRNW_					0	0	0		ENST00000508798.5_1_4:99393257-99393368:-|nuORF	ENST00000508798.5_1_4:99393257-99393368:-|nuORF	ENST00000508798.5_1_4:99393257-99393368:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.8204956054688	2	530.818744	1059.62294	-0.034622	-1.8378E-05	4.0917	0.002172	4.0571	0.0021536	530.820933749492	80.358	1.1642	80.42	79.976	81.14	0.062225					91	34	3	0	0	0	0.87276	1	7909	7909		29.842	0.67148	1	600980			35804	12981	23669	23678	40817	40817					0.09550933819105012
LVLIGDAF	8	Unmodified	_LVLIGDAF_					0	0	0		ENSG00000036448|ENST00000262113|MYOM2	ENSG00000036448|ENST00000262113|MYOM2	ENSG00000036448|ENST00000262113|MYOM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.2500915527344	2	424.249829	846.485105	-1.8671	-0.00079214	2.2977	0.00097481	0.43057	0.00018267	424.250891156039	107.16	1.149	107.19	106.72	107.87	0.036125					99	27	5	0	0	0	0.87807	1	11409	11409		31.579	1.7373	1	9677200			35805	902	23670	23679	40818	40818					0.05572185499852367
LVLILAFCV	9	Unmodified	_LVLILAFCV_					0	0	0		ENSG00000107281|ENST00000371601|NPDC1	ENSG00000107281|ENST00000371601|NPDC1	ENSG00000107281|ENST00000371601|NPDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	495.8060607910156	2	495.806457	989.598361	1.5878	0.00078725	-1.902	-0.00094302	-0.31418	-0.00015577	495.8054984304761	91.127	1.9829	91.06	90.603	92.586	-0.067085					94	47	4	0	0	0	0.78292	1	9584	9584		29.842	1.9593	1	755260			35806	2340	23671	23680	40819	40819					0.10314537621388808
LVLIVQRCGLK	11	Unmodified	_LVLIVQRCGLK_					0	0	0		ENST00000381341.6_1_2:15760479-15763589:+|nuORF	ENST00000381341.6_1_2:15760479-15763589:+|nuORF	ENST00000381341.6_1_2:15760479-15763589:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3934936523438	2	621.391751	1240.76895	-0.28805	-0.00017899	2.9635	0.0018415	2.6754	0.0016625	621.3935317040346	107.46	1.2706	107.43	106.55	107.82	-0.034401					61	29	4	0	0	0	0.72918	1	11641	11641		26.693	4.733	1	478940			35807	10954	23672	23681	40820	40820					0.15819448272850423
LVLKCDIHL	9	Unmodified	_LVLKCDIHL_					0	0	0		ENST00000262544.6_1_20:18488366-18488540:+|nuORF	ENST00000262544.6_1_20:18488366-18488540:+|nuORF	ENST00000262544.6_1_20:18488366-18488540:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.310546875	2	527.309895	1052.60524	0.27726	0.0001462	2.0339	0.0010725	2.3111	0.0012187	527.3108365684026	82.015	0.67683	82.515	82.227	82.903	0.49966					39	14	3	0	0	0	0.43338	1	9505	9505		55.504	4.3115	1	1876100			35808	9443	23673	23682	40821	40821					0.08103850501947818
LVLKCLLEG	9	Unmodified	_LVLKCLLEG_					0	0	0			REV__ENSG00000125522|ENST00000684052|NPBWR2	REV__ENSG00000125522|ENST00000684052|NPBWR2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3024597167969	2	494.298996	986.583439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.9	1	112.88	112.38	113.38	-0.024811								0	0	0	0.30416	1	12484	12484		29.15	0	1		+		35809	18650	23674	23683	40822	40822					0.08961045753392227
LVLKCLSR	8	Unmodified	_LVLKCLSR_					0	0	0		ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2895812988281	2	466.291505	930.568457	-1.3157	-0.00061351	-2.0254	-0.00094445	-3.3412	-0.001558	466.29039897325373	74.355	0.67729	74.355	74.138	74.815	0					55	29	3	0	0	0	0.88944	1	6692	6692		57.811	0	1	318180			35810	5233	23675	23684	40823	40823					0.10039598676053174
LVLKELTT	8	Unmodified	_LVLKELTT_					0	0	0		ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-3|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.78759765625	2	458.789318	915.564084	-1.7492	-0.00080251	-2.1622	-0.00099198	-3.9114	-0.0017945	458.7883137610394	92.976	2.4972	93.168	92.52	95.017	0.19239					169	59	5	0	0	0	0.85277	1	9435	9435		25.45	0	1	11606000			35811	6050	23676	23685	40824	40824					0.10292412734122536
LVLKKDQLHYP	11	Unmodified	_LVLKKDQLHYP_					0	0	0			REV__nc|ENSG00000162641|Q5T1N1-3|AKNAD1	REV__nc|ENSG00000162641|Q5T1N1-3|AKNAD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.932373046875	3	451.934484	1352.78162	-0.13839	-6.2545E-05	-3.7958	-0.0017155	-3.9342	-0.001778	451.93267141602934	99.223	2.3092	99.273	97.79	100.1	0.049828					147	53	3	0	0	0	0.74405	1	10549	10549		23.378	0.81632	1	486010	+		35812	15408	23677	23686	40825	40825					0.1193418293673858
LVLKKIPIP	9	Unmodified	_LVLKKIPIP_					0	0	0		nc|ENSG00000142675|Q969H4|CNKSR1;ENSG00000142675|ENST00000361530|CNKSR1;ENST00000531150.5_1_1:26508531-26510633:+|nuORF	nc|ENSG00000142675|Q969H4|CNKSR1	nc|ENSG00000142675|Q969H4|CNKSR1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.86053466796875	2	510.862621	1019.71069	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.18	1	115.16	114.66	115.66	-0.02433								0	0	0	0.36207	1	12760	12760		8.2313	4.2461	1				35813	4580	23678	23687	40826	40826					0.2016213468988326
LVLKPPRTLCV	11	Unmodified	_LVLKPPRTLCV_					0	0	0			REV__ENSG00000110042|ENST00000227451|DTX4	REV__ENSG00000110042|ENST00000227451|DTX4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.869384765625	2	619.886301	1237.75805	2.2357	0.0013859	3.4031	0.0021095	5.6388	0.0034954	619.8881134031486	95.671	0.16566	95.613	95.469	95.635	-0.057526					5	3	2	0	0	0	0.17387	1	10223	10223		30.318	4.7437	1	27036	+		35814	17788	23679	23688	40827	40827					0.1486804589858366
LVLKQVPVLDD	11	Unmodified	_LVLKQVPVLDD_					0	0	0		ENST00000545700.5_1_12:6562264-6567817:+|nuORF;nc|ENSG00000139192|Q9BX59-5|TAPBPL;nc|ENSG00000139192|Q9BX59-4|TAPBPL;nc|ENSG00000139192|Q9BX59-6|TAPBPL;nc|ENSG00000139192|Q9BX59-3|TAPBPL;ENST00000539384.5_1_12:6560901-6571312:+|nuORF;ENSG00000139192|ENST00000266556|TAPBPL;nc|ENSG00000139192|Q9BX59-2|TAPBPL;nc|ENSG00000139192|Q9BX59-7|TAPBPL	ENST00000545700.5_1_12:6562264-6567817:+|nuORF	ENST00000545700.5_1_12:6562264-6567817:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8695678710938	2	619.871371	1237.72819	0.62564	0.00038782	-3.7181	-0.0023047	-3.0924	-0.0019169	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.7342	1	10291	10291		25.574	0	1	4779100			35815	4352	23680	23689	40828	40828					0.11883385434225602
LVLKTGKQILE	11	Unmodified	_LVLKTGKQILE_					0	0	0			REV__nc|ENSG00000065150|O00410-2|IPO5	REV__nc|ENSG00000065150|O00410-2|IPO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3935546875	2	621.395013	1240.77547	0.6984	0.00043398	-4.3508	-0.0027036	-3.6524	-0.0022696	621.3922056168815	104.57	2.6797	104.61	104.09	106.77	0.039856					250	63	5	0	0	0	0.69995	1	11499	11499		31.53	3.6476	1	13976000	+		35816	16492	23681	23690	40829	40829					0.16471664705250078
LVLKTGKQILE	11	Unmodified	_LVLKTGKQILE_					0	0	0			REV__nc|ENSG00000065150|O00410-2|IPO5	REV__nc|ENSG00000065150|O00410-2|IPO5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.39404296875	2	621.395013	1240.77547	-1.2196	-0.00075786	-2.6137	-0.0016241	-3.8333	-0.002382	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.73893	1	11166	11166		24.519	2.5593	1	23459000	+		35817	16492	23681	23690	40830	40830					0.16471664705250078
LVLLAPAGWG	10	Unmodified	_LVLLAPAGWG_					0	0	0			REV__ENSG00000159618|ENST00000349457|ADGRG5	REV__ENSG00000159618|ENST00000349457|ADGRG5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.79473876953125	2	498.797478	995.580402	0.17641	8.7992E-05	-2.4804	-0.0012372	-2.304	-0.0011492	498.79609522633086	20.46	0.80788	20.001	19.732	20.54	-0.4591					39	18	3	0	0	0	0.86786	1	687	687		26.796	5.0938	1	154980	+		35818	20669	23682	23691	40831	40831					0.08243538690896912
LVLLFCELI	9	Unmodified	_LVLLFCELI_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8172607421875	2	531.817021	1061.61949	1.0296	0.00054754	-1.308	-0.00069562	-0.27845	-0.00014808	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.7932	1	8679	8679		25.45	0	1	1241100			35819	7631	23683	23692	40832	40832					0.09114502930242452
LVLLFCELI	9	Unmodified	_LVLLFCELI_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8164672851562	2	531.817021	1061.61949	0.70533	0.00037511	-1.0774	-0.00057299	-0.37209	-0.00019788	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.76996	1	8471	8471		33.516	0	1	1163300			35820	7631	23683	23692	40833	40833					0.09114502930242452
LVLLHLEKN	9	Unmodified	_LVLLHLEKN_					0	0	0		ENSG00000174348|ENST00000312553|PODN;nc|ENSG00000174348|Q7Z5L7-2|PODN;nc|ENSG00000174348|Q7Z5L7-3|PODN;nc|ENSG00000174348|Q7Z5L7-4|PODN	ENSG00000174348|ENST00000312553|PODN	ENSG00000174348|ENST00000312553|PODN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.8321533203125	2	539.834591	1077.65463	-0.19544	-0.00010551	-3.7687	-0.0020345	-3.9641	-0.00214	539.832406828333	95.236	2.2447	95.304	94.755	97	0.068344					122	52	4	0	0	0	0.74721	1	9959	9959		37.159	4.3467	1	1265100			35821	6926	23684	23693	40834	40834					0.11890881782437646
LVLLIKGG	8	Unmodified	_LVLLIKGG_					0	0	0		nc|ENSG00000169507|Q08AI6-2|SLC38A11;nc|ENSG00000169507|Q08AI6|SLC38A11;ENSG00000169507|ENST00000685975|SLC38A11	nc|ENSG00000169507|Q08AI6-2|SLC38A11	nc|ENSG00000169507|Q08AI6-2|SLC38A11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7853088378906	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.82419	1	1668	1668		13.775	3.5906	1	1606100			35822	6500	23685	23694	40835	40835					0.1398105515052066
LVLLIKGG	8	Unmodified	_LVLLIKGG_					0	0	0		nc|ENSG00000169507|Q08AI6-2|SLC38A11;nc|ENSG00000169507|Q08AI6|SLC38A11;ENSG00000169507|ENST00000685975|SLC38A11	nc|ENSG00000169507|Q08AI6-2|SLC38A11	nc|ENSG00000169507|Q08AI6-2|SLC38A11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.785400390625	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.86294	1	1809	1809		8.8223	0	1	1953100			35823	6500	23685	23694	40836	40836					0.1398105515052066
LVLLLLRPR	9	Unmodified	_LVLLLLRPR_					0	0	0			REV__nc|ENSG00000106799|P36897-3|TGFBR1	REV__nc|ENSG00000106799|P36897-3|TGFBR1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8399658203125	2	546.884419	1091.75428	1.2642	0.00069135	2.8302	0.0015478	4.0943	0.0022391	546.8859630829993	100.97	0.4851	101.02	100.82	101.3	0.046349					13	7	2	0	0	0	0.20789	1	10900	10900		12.207	0	1	132600	+		35824	17630	23686	23695	40837	40837					0.2120774418704059
LVLLLTAPSAR	11	Unmodified	_LVLLLTAPSAR_					0	0	0			REV__ENSG00000159763|ENST00000291009|PIP	REV__ENSG00000159763|ENST00000291009|PIP	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3104858398438	2	577.368798	1152.72304	-0.31061	-0.00017934	-2.7519	-0.0015888	-3.0625	-0.0017682	577.8687185507695	110.42	0.32451	110.42	110.25	110.57	0					10	8	2	0	0	0	0.17431	1	11470	11470		24.519	0	1	42864	+		35825	20681	23687	23696	40838	40838					0.15279126362247553
LVLLVAVIAI	10	Unmodified	_LVLLVAVIAI_					0	0	0			REV__chr12:79046451-79047297|23|13.17|0.68|4.28|+|ENST00000446242|SYT1,SYT1	REV__chr12:79046451-79047297|23|13.17|0.68|4.28|+|ENST00000446242|SYT1,SYT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.3607177734375	2	512.362453	1022.71035	-0.13841	-7.0915E-05	-2.2699	-0.001163	-2.4083	-0.0012339	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.86786	1	7379	7379		26.796	0	1	293160	+		35826	15555	23688	23697	40839	40839					0.19990714970015233
LVLLVERPWTG	11	Unmodified	_LVLLVERPWTG_					0	0	0			REV__nc|ENSG00000106991|P17813-2|ENG	REV__nc|ENSG00000106991|P17813-2|ENG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8816528320312	2	641.87953	1281.74451	1.5937	0.0010229	2.8364	0.0018207	4.4301	0.0028436	641.8811997248309	95.576	2.5829	95.807	94.242	96.825	0.23103					208	61	4	0	0	0	0.75164	1	9930	9930		21.686	0.73882	1	2238900	+		35827	17640	23689	23698	40840	40840					0.11490511390957181
LVLLVIVFALF	11	Unmodified	_LVLLVIVFALF_					0	0	0			REV__nc|ENSG00000253485|Q9Y5G8-2|PCDHGA5	REV__nc|ENSG00000253485|Q9Y5G8-2|PCDHGA5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	623.9168090820312	2	623.91231	1245.81007	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.85	1	109.92	109.42	110.42	0.068001								0	0	0	0.56276	1	13340	13340		11.511	1.2458	1		+		35828	23879	23690	23699	40841	40841					0.19699532583967994
LVLLVLLVP	9	Unmodified	_LVLLVLLVP_					0	0	0		ENST00000225964.9_1_17:48265286-48266811:-|nuORF	ENST00000225964.9_1_17:48265286-48266811:-|nuORF	ENST00000225964.9_1_17:48265286-48266811:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.85137939453125	2	489.851722	977.68889	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.366	1	74.409	73.909	74.909	0.0429								0	0	0	0.32542	1	7111	7111		21.702	0	1				35829	9193	23691	23700	40842	40842					0.19915329941318305
LVLLVWRA	8	Unmodified	_LVLLVWRA_					0	0	0			REV__ENSG00000105223|ENST00000409735|PLD3	REV__ENSG00000105223|ENST00000409735|PLD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.298828125	2	485.315838	968.617122	0.27653	0.0001342	-3.9724	-0.0019279	-3.6959	-0.0017937	485.31368744110426	29.538	0.558	29.449	29.061	29.619	-0.089544					17	12	2	0	0	0	0.4196	1	1880	1880		4.3163	0	1	52821	+		35830	17515	23692	23701	40843	40843					0.13155835307452435
LVLLWVDFFDG	11	Unmodified	_LVLLWVDFFDG_					0	0	0			REV__ENST00000368457.2_1_1:154931107-154931215:-|nuORF	REV__ENST00000368457.2_1_1:154931107-154931215:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78814697265625	3	441.904301	1322.69108	-0.48197	-0.00021298	-1.2514	-0.00055298	-1.7333	-0.00076596	441.9028393646035	37.994	0.41314	38.307	38.055	38.468	0.31312					20	10	3	0	0	0	0.17294	1	3115	3115		19.263	1.4295	1	106750	+		35831	25597	23693	23702	40844	40844					0.04263713888440179
LVLMTILAF	9	Unmodified	_LVLMTILAF_					0	0	0		nc|ENSG00000132424|Q8TF01-2|PNISR	nc|ENSG00000132424|Q8TF01-2|PNISR	nc|ENSG00000132424|Q8TF01-2|PNISR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.3274841308594	2	510.811739	1019.60893	2.5239	0.0012893	-0.56926	-0.00029079	1.9547	0.00099847	510.8114072458286	98.001	0.59952	97.945	97.644	98.244	-0.055542					17	13	2	0	0	0	0.20789	1	10529	10529		24.203	0	1	47891			35832	14921	23694	23703	40845	40845					0.09990520275823656
LVLNILPE	8	Unmodified	_LVLNILPE_					0	0	0		nc|ENSG00000115598|Q9HB29-2|IL1RL2;ENSG00000115598|ENST00000264257|IL1RL2	nc|ENSG00000115598|Q9HB29-2|IL1RL2	nc|ENSG00000115598|Q9HB29-2|IL1RL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.7845458984375	2	455.784036	909.553519	-0.47276	-0.00021548	1.5338	0.00069906	1.061	0.00048359	455.7845015960233	43.766	2.0798	43.763	42.978	45.058	-0.002449					74	49	2	0	0	0	0.86288	2	3382	3382;3389		31.955	6.3143	1	282760			35833	2859	23695	23704	40846;40847	40846					0.0951243007971243
LVLNKTTS	8	Unmodified	_LVLNKTTS_					0	0	0		nc|ENSG00000048707|Q5THJ4-2|VPS13D;ENSG00000048707|ENST00000620676|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26336669921875	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.87479	1	2590	2590		30.504	4.9296	1	3673500			35834	977	23696	23705	40848	40848					0.07010669040232642
LVLNRVMVTKI	11	Unmodified	_LVLNRVMVTKI_					0	0	0		ENST00000535787.5_1_2:148602260-148654031:+|nuORF;ENST00000462659.1_1_2:148602260-148654031:+|nuORF;ENST00000241416.11_1_2:148602731-148654031:+|nuORF	ENST00000535787.5_1_2:148602260-148654031:+|nuORF	ENST00000535787.5_1_2:148602260-148654031:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4059448242188	2	643.404858	1284.79516	0.94326	0.0006069	1.5771	0.0010147	2.5204	0.0016216	643.4057417471539	106.19	1.8486	106.29	106.11	107.96	0.099007					180	44	5	0	0	0	0.7434	1	11417	11417		23.523	0.94304	1	16037000			35835	9249	23697	23706	40849	40849					0.16415717444328948
LVLPCNQSVV	10	Carbamidomethyl (C)	_LVLPC(Carbamidomethyl (C))NQSVV_	LVLPC(1)NQSVV		LVLPC(44)NQSVV		0	1	0		nc|ENSG00000123243|Q86UX2|ITIH5;ENSG00000123243|ENST00000397146|ITIH5;nc|ENSG00000123243|Q86UX2-3|ITIH5	nc|ENSG00000123243|Q86UX2|ITIH5	nc|ENSG00000123243|Q86UX2|ITIH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.8099975585938	2	564.807716	1127.60088	3.0107	0.0017004	1.8168	0.0010261	4.8274	0.0027266	564.8086416193407	110	1.6919	109.97	109.64	111.33	-0.027641					152	59	3	0	0	0	0.71042	1	12191	12191		44.117	8.9648	1	4099500			35836	3266	23698	23707	40850	40850	39				0.04218341288378724
LVLPGSSSL	9	Unmodified	_LVLPGSSSL_					0	0	0		ENSG00000143971|ENST00000272342|ETAA1	ENSG00000143971|ENST00000272342|ETAA1	ENSG00000143971|ENST00000272342|ETAA1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7748718261719	2	436.758018	871.501483	1.4358	0.00062709	3.3711	0.0014724	4.8069	0.0020994	436.75945636846285	91.044	0.35501	90.977	90.8	91.155	-0.067085					12	8	2	0	0	0	0.20789	1	9550	9550		24.203	6.8378	1	220170			35837	4681	23699	23708	40851	40851					0.060592666659431416
LVLPIWKPR	9	Unmodified	_LVLPIWKPR_					0	0	0			REV__ENST00000497746.1_1_7:131155602-131155641:+|nuORF	REV__ENST00000497746.1_1_7:131155602-131155641:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.3640747070312	2	561.363319	1120.71209	-1.2272	-0.00068889	2.0811	0.0011683	0.85392	0.00047936	561.3643862619919	45.972	0.98896	45.972	45.502	46.491	0					58	25	3	0	0	0	0.7932	2	3467	3467;3478		19.36	0.81615	1	208060	+		35838	27776	23700	23709	40852;40853	40852					0.15655768778628953
LVLPIWKPR	9	Unmodified	_LVLPIWKPR_					0	0	0			REV__ENST00000497746.1_1_7:131155602-131155641:+|nuORF	REV__ENST00000497746.1_1_7:131155602-131155641:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.364501953125	2	561.363319	1120.71209	-0.90534	-0.00050823	1.7899	0.0010048	0.88454	0.00049655	561.3641911256115	45.987	0.8561	45.968	45.577	46.433	-0.018581					49	20	3	0	0	0	0.7932	2	3652	3652;3679		25.45	6.7065	1	139730	+		35839	27776	23700	23709	40854;40855	40854					0.15655768778628953
LVLPIWKPR	9	Unmodified	_LVLPIWKPR_					0	0	0			REV__ENST00000497746.1_1_7:131155602-131155641:+|nuORF	REV__ENST00000497746.1_1_7:131155602-131155641:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	561.3640747070312	2	561.363319	1120.71209	-0.54951	-0.00030848	1.3579	0.00076227	0.80838	0.00045379	561.3639017095335	46.054	1.012	46.025	45.497	46.509	-0.028782					47	23	3	0	0	0	0.7932	1	3772	3772		19.36	5.5846	1	192690	+		35840	27776	23700	23709	40856	40856					0.15655768778628953
LVLPIWKPR	9	Unmodified	_LVLPIWKPR_					0	0	0			REV__ENST00000497746.1_1_7:131155602-131155641:+|nuORF	REV__ENST00000497746.1_1_7:131155602-131155641:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	561.3638916015625	2	561.363319	1120.71209	0.36841	0.00020681	0.51093	0.00028682	0.87934	0.00049363	561.3635301771415	45.972	0.96019	46.015	45.484	46.444	0.042599					56	26	3	0	0	0	0.77546	2	3316	3316;3327		31.955	4.0726	1	166630	+		35841	27776	23700	23709	40857;40858	40857					0.15655768778628953
LVLPLGKV	8	Unmodified	_LVLPLGKV_					0	0	0		ENST00000568763.1_1_16:30195026-30196791:+|nuORF	ENST00000568763.1_1_16:30195026-30196791:+|nuORF	ENST00000568763.1_1_16:30195026-30196791:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.77349853515625	2	419.791664	837.568775	-1.462	-0.00061372	0.91635	0.00038467	-0.54561	-0.00022904	419.7913331530081	41.165	0.24539	41.799	41.604	41.85	0.6339					9	6	2	0	0	0	0.4196	1	3583	3583		9.4706	0	1	197820			35842	13969	23701	23710	40859	40859					0.14349341667559656
LVLPLLPF	8	Unmodified	_LVLPLLPF_					0	0	0			REV__ENSG00000198768|ENST00000371149|APCDD1L	REV__ENSG00000198768|ENST00000371149|APCDD1L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.301025390625	2	456.301865	910.589176	-1.9609	-0.00089476	0.42413	0.00019353	-1.5368	-0.00070123	456.3019244318546	33.431	1.5568	33.431	33.135	34.692	0					145	44	4	0	0	0	0.84567	1	1815	1815		24.504	0	1	2313000	+		35843	23378	23702	23711	40860	40860					0.1303051232737289
LVLPLLPF	8	Unmodified	_LVLPLLPF_					0	0	0			REV__ENSG00000198768|ENST00000371149|APCDD1L	REV__ENSG00000198768|ENST00000371149|APCDD1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3012390136719	2	456.301865	910.589176	-0.32797	-0.00014965	-1.1299	-0.00051556	-1.4578	-0.00066522	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.88393	1	1927	1927		33.493	0	1	1220600	+		35844	23378	23702	23711	40861	40861					0.1303051232737289
LVLPPSKRSL	10	Unmodified	_LVLPPSKRSL_					0	0	0		ENST00000334746.9_2_14:93761061-93761256:-|nuORF	ENST00000334746.9_2_14:93761061-93761256:-|nuORF	ENST00000334746.9_2_14:93761061-93761256:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.3530883789062	2	555.355691	1108.69683	-0.86355	-0.00047958	-3.4797	-0.0019325	-4.3433	-0.0024121	555.3536421650435	101.16	2.3681	101.19	100.7	103.07	0.031036					166	56	5	0	0	0	0.86047	1	10792	10792		23.523	0.48021	1	6361400			35845	10150	23703	23712	40862	40862					0.14682857190791765
LVLPTTLLTAQ	11	Unmodified	_LVLPTTLLTAQ_					0	0	0		nc|ENSG00000100578|Q9BVV6-3|KIAA0586;ENST00000538571.6_1_14:58909433-59003756:+|nuORF;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586;ENSG00000100578|ENST00000652326|KIAA0586;ENST00000557392.1_1_14:58975310-58987641:+|nuORF	nc|ENSG00000100578|Q9BVV6-3|KIAA0586	nc|ENSG00000100578|Q9BVV6-3|KIAA0586	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.7633056640625	2	585.360639	1168.70673	-1.2663	-0.00074123	-0.64431	-0.00037715	-1.9106	-0.0011184	585.3611941931183	63.788	0.26089	64.174	64.091	64.352	0.38681					8	5	2	0	0	0	0.17245	1	6872	6872		17.468	0	1	36984			35846	14815	23704	23713	40863	40863					0.1291200040552667
LVLPWLALP	9	Unmodified	_LVLPWLALP_					0	0	0		ENST00000532415.5_1_16:18477017-18479494:-|nuORF	ENST00000532415.5_1_16:18477017-18479494:-|nuORF	ENST00000532415.5_1_16:18477017-18479494:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.3272705078125	2	511.325871	1020.63719	0.52338	0.00026762	1.9285	0.00098609	2.4519	0.0012537	511.3267559398498	97.201	2.4372	97.249	96.783	99.22	0.048157					148	56	4	0	0	0	0.7932	1	10418	10418		14.664	0	1	1880900			35847	13377	23705	23714	40864	40864					0.12769586247395637
LVLQKGCI	8	Unmodified	_LVLQKGCI_					0	0	0			REV__ENST00000216468.7_1_14:77812735-77812792:-|nuORF	REV__ENST00000216468.7_1_14:77812735-77812792:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.56915283203125	2	437.264956	872.515359	0.37077	0.00016212	1.0008	0.00043763	1.3716	0.00059975	437.2656270426316	34.24	0.32717	34.45	34.319	34.646	0.21003					10	7	2	0	0	0	0.4196	1	2525	2525		13.775	0	1	75744	+		35848	24134	23706	23715	40865	40865					0.0740022089340755
LVLRKLLDREE	11	Unmodified	_LVLRKLLDREE_					0	0	0		nc|ENSG00000250120|Q9Y5I2-3|PCDHA10;nc|ENSG00000250120|Q9Y5I2-2|PCDHA10;chr5:140857647-140978949|33|10.7|0.62|4.11|+|ENST00000506939|PCDHA10,PCDHAC2;nc|ENSG00000204963|Q9UN72-2|PCDHA7;ENSG00000204963|ENST00000525929|PCDHA7;ENSG00000250120|ENST00000307360|PCDHA10;nc|ENSG00000204961|Q9Y5H5-2|PCDHA9;ENSG00000204961|ENST00000532602|PCDHA9	nc|ENSG00000250120|Q9Y5I2-3|PCDHA10;nc|ENSG00000204961|Q9Y5H5-2|PCDHA9	nc|ENSG00000250120|Q9Y5I2-3|PCDHA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.9483642578125	3	461.948793	1382.82455	0.76575	0.00035374	-2.1101	-0.00097476	-1.3444	-0.00062102	461.94782502952427	107.84	0.75671	107.93	107.26	108.01	0.084404					86	18	6	0	0	0	0.7896	1	11539	11539		13.508	0	1	101570000			35849	15288;8502	23707	23716	40866	40866					0.14844952994189953
LVLRKRIAA	9	Unmodified	_LVLRKRIAA_					0	0	0		nc|ENSG00000137177|Q9H1H9-3|KIF13A;nc|ENSG00000137177|Q9H1H9-4|KIF13A;nc|ENSG00000137177|Q9H1H9-2|KIF13A;ENSG00000137177|ENST00000259711|KIF13A	nc|ENSG00000137177|Q9H1H9-3|KIF13A	nc|ENSG00000137177|Q9H1H9-3|KIF13A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.3102416992188	2	520.358568	1038.70258	-0.81755	-0.00042542	-4.4734	-0.0023278	-5.2909	-0.0027532	520.3568981405291	47.525	0.34311	48.448	48.238	48.581	0.92315					13	8	2	0	0	0	0.20789	1	4567	4567		8.8223	0	1	155430			35850	4176	23708	23717	40867	40867					0.1847800049313264
LVLRLNAPLCV	11	Unmodified	_LVLRLNAPLCV_					0	0	0		ENST00000532758.5_1_8:145137633-145138586:+|nuORF;ENSG00000197858|ENST00000355091|GPAA1	ENST00000532758.5_1_8:145137633-145138586:+|nuORF	ENST00000532758.5_1_8:145137633-145138586:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.8729248046875	2	605.870651	1209.72675	2.1175	0.0012829	0.79265	0.00048024	2.9102	0.0017632	605.8709120957792	99.886	1.4328	100.22	99.77	101.2	0.33295					98	35	4	0	0	0	0.71452	1	12097	12097		29.15	2.4566	1	1222300			35851	8206	23709	23718	40868	40868					0.13027472864496303
LVLRLRRPSD	10	Unmodified	_LVLRLRRPSD_					0	0	0			REV__nc|ENSG00000108506|Q9H0H0|INTS2	REV__nc|ENSG00000108506|Q9H0H0|INTS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.8802490234375	2	612.880396	1223.74624	-0.38675	-0.00023703	-0.97797	-0.00059938	-1.3647	-0.00083641	612.8795891868975	104.75	3.6593	104.74	104.15	107.81	-0.014809					295	86	6	0	0	0	0.86718	1	11434	11434		27.882	0	1	46932000	+		35852	17714	23710	23719	40869	40869					0.1433156519960903
LVLRLRSGEPQ	11	Unmodified	_LVLRLRSGEPQ_					0	0	0		nc|ENSG00000150093|P05556-2|ITGB1;ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3759765625	2	634.377686	1266.74082	-0.13799	-8.754E-05	-0.83355	-0.00052878	-0.97154	-0.00061633	634.3769981917211	117.62	0.35755	117.55	117.34	117.69	-0.07531					32	12	3	0	0	0	0.7144	1	12626	12626		29.17	0.020503	1	1153300			35853	5059	23711	23720	40870	40870					0.11811841617145546
LVLRLRSGEPQ	11	Unmodified	_LVLRLRSGEPQ_					0	0	0		nc|ENSG00000150093|P05556-2|ITGB1;ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3770751953125	2	634.377686	1266.74082	-0.13776	-8.7389E-05	-0.53102	-0.00033687	-0.66878	-0.00042426	634.3771594108364	117.84	0.45279	117.77	117.69	118.15	-0.07531					44	17	3	0	0	0	0.72739	1	12669	12669		27.047	0.3544	1	1053300			35854	5059	23711	23720	40871	40871					0.11811841617145546
LVLRLRSGEPQ	11	Unmodified	_LVLRLRSGEPQ_					0	0	0		nc|ENSG00000150093|P05556-2|ITGB1;ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3770141601562	2	634.377686	1266.74082	1.3188	0.00083664	-1.7871	-0.0011337	-0.46828	-0.00029707	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.69995	1	12819	12819		31.53	0	1	12917000			35855	5059	23711	23720	40872	40872					0.11811841617145546
LVLRLRSGEPQ	11	Unmodified	_LVLRLRSGEPQ_					0	0	0		nc|ENSG00000150093|P05556-2|ITGB1;ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3765869140625	2	634.377686	1266.74082	0.93394	0.00059247	-2.1331	-0.0013532	-1.1991	-0.00076069	634.3760615979032	111.89	0.64575	111.96	111.47	112.12	0.069542					57	19	4	0	0	0	0.65746	1	12017	12017		37.812	0	1	7169800			35856	5059	23711	23720	40873	40873					0.11811841617145546
LVLRPPHA	8	Unmodified	_LVLRPPHA_					0	0	0		nc|ENSG00000143554|Q5K4L6-2|SLC27A3;ENSG00000143554|ENST00000624995|SLC27A3;ENST00000368660.1_1_1:153751554-153752475:+|nuORF;ENST00000483574.6_1_1:153751589-153752475:+|nuORF;ENST00000468403.1_1_1:153751697-153752222:+|nuORF	nc|ENSG00000143554|Q5K4L6-2|SLC27A3;ENST00000468403.1_1_1:153751697-153752222:+|nuORF	ENST00000468403.1_1_1:153751697-153752222:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.7791748046875	2	451.782162	901.549771	-1.7245	-0.00077912	-2.6355	-0.0011906	-4.36	-0.0019698	451.7808657974631	86.503	1.1616	86.667	86.314	87.476	0.16473					51	26	3	0	0	0	0.83466	1	8461	8461		23.037	0	1	162500			35857	12177;4645	23712	23721	40874	40874					0.09505805096500808
LVLRRKRKR	9	Unmodified	_LVLRRKRKR_					0	0	0		ENSG00000177455|ENST00000538922|CD19;nc|ENSG00000177455|P15391-2|CD19	ENSG00000177455|ENST00000538922|CD19	ENSG00000177455|ENST00000538922|CD19	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8792724609375	2	612.928015	1223.84148	0.91259	0.00055935	1.4346	0.00087929	2.3472	0.0014386	612.9287065803969	104.65	0.19449	104.77	104.59	104.79	0.11685					6	4	2	0	0	0	0.20789	1	11104	11104		12.207	0	1	153010			35858	7141	23713	23722	40875	40875					0.23850963181303086
LVLRSLMA	8	Unmodified	_LVLRSLMA_					0	0	0			REV__ENST00000473294.6_1_1:33098913-33099651:-|nuORF	REV__ENST00000473294.6_1_1:33098913-33099651:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7800598144531	2	451.778231	901.541908	-0.13936	-6.2962E-05	3.9691	0.0017932	3.8297	0.0017302	451.78016542853146	86.777	1.2456	86.844	86.37	87.616	0.067444					84	28	4	0	0	0	0.85277	1	8755	8755		25.45	0	1	241100	+		35859	27281	23714	23723	40876	40876					0.08719909784736046
LVLRSLMA	8	Unmodified	_LVLRSLMA_					0	0	0			REV__ENST00000473294.6_1_1:33098913-33099651:-|nuORF	REV__ENST00000473294.6_1_1:33098913-33099651:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7798767089844	2	451.778231	901.541908	0.99248	0.00044838	3.0988	0.0014	4.0913	0.0018484	451.77963856381217	86.78	1.6717	86.706	86.227	87.899	-0.074005					91	38	4	0	0	0	0.89494	1	8964	8964		37.159	1.9584	1	335390	+		35860	27281	23714	23723	40877	40877					0.08719909784736046
LVLRSLMA	8	Unmodified	_LVLRSLMA_					0	0	0			REV__ENST00000473294.6_1_1:33098913-33099651:-|nuORF	REV__ENST00000473294.6_1_1:33098913-33099651:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7799377441406	2	451.778231	901.541908	1.0261	0.00046357	2.9325	0.0013249	3.9586	0.0017884	451.779676395938	86.614	1.2405	86.669	86.189	87.43	0.055641					81	28	4	0	0	0	0.87922	1	8858	8858		31.955	0	1	295460	+		35861	27281	23714	23723	40878	40878					0.08719909784736046
LVLSCVKVAS	10	Unmodified	_LVLSCVKVAS_					0	0	0		ENST00000506360.5_1_4:8220037-8234255:+|nuORF;ENST00000502669.5_1_4:8220037-8239209:+|nuORF;ENST00000515682.5_1_4:8207046-8242679:+|nuORF;ENSG00000125089|ENST00000245105|SH3TC1	ENST00000506360.5_1_4:8220037-8234255:+|nuORF	ENST00000506360.5_1_4:8220037-8234255:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8036193847656	2	509.801903	1017.58925	1.253	0.0006388	2.312	0.0011787	3.5651	0.0018175	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.8545	1	8890	8890		36.447	0.82846	1	3243500			35862	3373	23715	23724	40879	40879					0.08116144265068215
LVLSCVKVAS	10	Unmodified	_LVLSCVKVAS_					0	0	0		ENST00000506360.5_1_4:8220037-8234255:+|nuORF;ENST00000502669.5_1_4:8220037-8239209:+|nuORF;ENST00000515682.5_1_4:8207046-8242679:+|nuORF;ENSG00000125089|ENST00000245105|SH3TC1	ENST00000506360.5_1_4:8220037-8234255:+|nuORF	ENST00000506360.5_1_4:8220037-8234255:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.80364990234375	2	509.801903	1017.58925	-0.073627	-3.7535E-05	3.6181	0.0018445	3.5444	0.001807	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.86698	1	10074	10074		28.081	0.19925	1	3087300			35863	3373	23715	23724	40880	40880					0.08116144265068215
LVLSELEAA	9	Unmodified	_LVLSELEAA_					0	0	0		ENSG00000165807|ENST00000298705|PPP1R36	ENSG00000165807|ENST00000298705|PPP1R36	ENSG00000165807|ENST00000298705|PPP1R36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7671813964844	2	472.768583	943.522613	0.74188	0.00035074	-3.5197	-0.001664	-2.7778	-0.0013133	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.7932	1	8630	8630		25.45	1.2474	1	547170			35864	6126	23716	23725	40881	40881					0.048592319748081536
LVLSKLVHN	9	Unmodified	_LVLSKLVHN_					0	0	0		ENSG00000100802|ENST00000299088|C14orf93;nc|nan|Q9H972-2|C14orf93	ENSG00000100802|ENST00000299088|C14orf93	ENSG00000100802|ENST00000299088|C14orf93	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.82000732421875	2	511.821484	1021.62842	-0.3553	-0.00018185	-0.73371	-0.00037553	-1.089	-0.00055738	511.82094672219745	83.15	0.73647	83.315	82.974	83.711	0.1651					24	13	2	0	0	0	0.7932	1	8043	8043		23.042	1.0826	1	97021			35865	1871	23717	23726	40882	40882					0.11846612610952434
LVLSLILPRSS	11	Unmodified	_LVLSLILPRSS_					0	0	0		ENST00000491166.1_1_13:114201574-114203850:+|nuORF;ENST00000460039.5_1_13:114200091-114203850:+|nuORF;ENSG00000150403|ENST00000434316|TMCO3	ENST00000491166.1_1_13:114201574-114203850:+|nuORF	ENST00000491166.1_1_13:114201574-114203850:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.3798828125	2	599.381906	1196.74926	-0.54345	-0.00032574	-2.532	-0.0015176	-3.0754	-0.0018434	599.3802252506414	103.57	3.0198	103.57	103.18	106.2	-0.0035782					175	72	5	0	0	0	0.64498	1	11183	11183		39.253	0.44669	1	11998000			35866	5063	23718	23727	40883	40883					0.15875395533748815
LVLSLILPRSS	11	Unmodified	_LVLSLILPRSS_					0	0	0		ENST00000491166.1_1_13:114201574-114203850:+|nuORF;ENST00000460039.5_1_13:114200091-114203850:+|nuORF;ENSG00000150403|ENST00000434316|TMCO3	ENST00000491166.1_1_13:114201574-114203850:+|nuORF	ENST00000491166.1_1_13:114201574-114203850:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.3796997070312	2	599.381906	1196.74926	-0.35766	-0.00021438	-2.6712	-0.0016011	-3.0289	-0.0018155	599.3801693786043	103.37	3.7428	103.41	103.03	106.77	0.041481					250	89	5	0	0	0	0.73893	1	11257	11257		24.519	3.5723	1	13277000			35867	5063	23718	23727	40884	40884					0.15875395533748815
LVLSLILPRSS	11	Unmodified	_LVLSLILPRSS_					0	0	0		ENST00000491166.1_1_13:114201574-114203850:+|nuORF;ENST00000460039.5_1_13:114200091-114203850:+|nuORF;ENSG00000150403|ENST00000434316|TMCO3	ENST00000491166.1_1_13:114201574-114203850:+|nuORF	ENST00000491166.1_1_13:114201574-114203850:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3802490234375	2	599.381906	1196.74926	0.97491	0.00058434	-4.0729	-0.0024412	-3.098	-0.0018569	599.3792959797308	103.23	2.9032	103.41	102.97	105.87	0.18297					219	73	5	0	0	0	0.64498	4	10885	10885;10909;10921;10957		39.253	7.723	1	22539000			35868	5063	23718	23727	40885;40886;40887;40888	40885					0.15875395533748815
LVLSLLATNPL	11	Unmodified	_LVLSLLATNPL_					0	0	0			REV__nc|ENSG00000004939|P02730-2|SLC4A1	REV__nc|ENSG00000004939|P02730-2|SLC4A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.3665161132812	2	577.363182	1152.71181	3.0575	0.0017653	2.5466	0.0014703	5.6041	0.0032356	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.67778	1	11248	11248		35.152	9.578	1	11111000	+		35869	16069	23719	23728	40889	40889					0.141563042681355
LVLSRLHGQEQ	11	Unmodified	_LVLSRLHGQEQ_					0	0	0			REV__ENSG00000174004|ENST00000328557|NRROS	REV__ENSG00000174004|ENST00000328557|NRROS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3591918945312	2	640.359493	1278.70443	-1.1585	-0.00074183	0.10064	6.4446E-05	-1.0578	-0.00067738	640.3594398218631	99.341	2.5092	99.527	98.68	101.19	0.18581					187	58	4	0	0	0	0.62614	1	10351	10351		41.427	0	1	585260	+		35870	21968	23720	23729	40890	40890					0.07622964720439995
LVLSRLNALPR	11	Unmodified	_LVLSRLNALPR_					0	0	0			REV__ENSG00000170382|ENST00000367177|LRRN2	REV__ENSG00000170382|ENST00000367177|LRRN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3922119140625	2	626.398422	1250.78229	0.92581	0.00057992	-2.3098	-0.0014469	-1.384	-0.00086694	626.3968728560952	110.01	0.77213	110.08	109.8	110.57	0.073685					34	27	2	0	0	0	0.75495	1	11805	11805		20.947	0.95016	1	935690	+		35871	21654	23721	23730	40891	40891					0.16693022376466615
LVLTEAVGEEL	11	Unmodified	_LVLTEAVGEEL_					0	0	0			REV__ENST00000487673.5_1_6:43111066-43128616:+|nuORF	REV__ENST00000487673.5_1_6:43111066-43128616:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.8240356445312	2	586.824086	1171.63362	-0.26066	-0.00015296	-0.23691	-0.00013902	-0.49757	-0.00029198	586.8238105998267	110.35	1.3355	110.35	110.09	111.43	0					132	40	5	0	0	0	0.63176	1	11518	11518		40.778	10.46	1	4860400	+		35872	17957	23722	23731	40892	40892					0.05466826892256904
LVLTGKEL	8	Unmodified	_LVLTGKEL_					0	0	0			REV__ENSG00000203730|ENST00000367565|TEDDM1	REV__ENSG00000203730|ENST00000367565|TEDDM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.774658203125	2	436.776211	871.537869	-1.136	-0.00049617	-1.8731	-0.00081814	-3.0091	-0.0013143	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.87922	1	8997	8997		31.955	0	1	8774400	+		35873	23438	23723	23732	40893	40893					0.09696143562666748
LVLTGTVRQQ	10	Unmodified	_LVLTGTVRQQ_					0	0	0			REV__nc|ENSG00000181856|P14672-2|SLC2A4	REV__nc|ENSG00000181856|P14672-2|SLC2A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.8300170898438	2	557.83258	1113.65061	0.35884	0.00020017	-3.5133	-0.0019598	-3.1545	-0.0017597	557.8305500141807	100.81	1.6091	101.01	100.54	102.15	0.2058					76	38	3	0	0	0	0.85466	1	10601	10601		20.947	0.95016	1	1006700	+		35874	22484	23724	23733	40894	40894					0.09832792288693781
LVLTGTVRQQ	10	Unmodified	_LVLTGTVRQQ_					0	0	0			REV__nc|ENSG00000181856|P14672-2|SLC2A4	REV__nc|ENSG00000181856|P14672-2|SLC2A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.8306884765625	2	557.83258	1113.65061	0.85904	0.0004792	-4.0851	-0.0022788	-3.2261	-0.0017996	557.8303228390891	100.95	1.6407	101.1	100.55	102.19	0.14352					87	39	3	0	0	0	0.86587	1	10617	10617		29.17	1.2878	1	700710	+		35875	22484	23724	23733	40895	40895					0.09832792288693781
LVLTPPVILGD	11	Unmodified	_LVLTPPVILGD_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.8536376953125	2	568.849907	1135.68526	3.5879	0.002041	2.6262	0.0014939	6.2141	0.0035349	568.851249822681	101.98	1.2018	102.3	101.89	103.1	0.32511					111	29	5	0	0	0	0.69995	2	12401	12401;12437		31.53	4.7337	1	10281000			35876	4956	23725	23734	40896;40897	40896					0.12284615376825059
LVLTVKQT	8	Unmodified	_LVLTVKQT_					0	0	0			REV__ENST00000263256.6_1_22:41996614-41996872:-|nuORF	REV__ENST00000263256.6_1_22:41996614-41996872:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.2887878417969	2	451.289485	900.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.922	1	43.619	43.119	44.119	0.69754								0	0	0	0.28375	1	3865	3865		54.776	5.2403	1		+		35877	24442	23726	23735	40898	40898					0.11015832453995245
LVLVALLAILV	11	Unmodified	_LVLVALLAILV_					0	0	0		nc|ENSG00000186431|P24071-6|FCAR;nc|ENSG00000186431|P24071-7|FCAR;nc|ENSG00000186431|P24071-9|FCAR;nc|ENSG00000186431|P24071-3|FCAR;nc|ENSG00000186431|P24071-11|FCAR;nc|ENSG00000186431|P24071-2|FCAR;nc|ENSG00000186431|P24071-10|FCAR;ENSG00000186431|ENST00000355524|FCAR	nc|ENSG00000186431|P24071-6|FCAR	nc|ENSG00000186431|P24071-6|FCAR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8530883789062	2	568.904485	1135.79442	0.52178	0.00029684	-1.3257	-0.00075421	-0.80394	-0.00045736	568.9025012232785	102.41	0.20488	102.6	102.52	102.73	0.19483					6	4	2	0	0	0	0.17277	1	10788	10788		24.203	0	1	41230			35878	15158	23727	23736	40899	40899					0.23195246066916297
LVLVALPVAL	10	Unmodified	_LVLVALPVAL_					0	0	0			REV__ENST00000555574.1_1_14:51706965-51712033:+|nuORF	REV__ENST00000555574.1_1_14:51706965-51712033:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.34515380859375	2	504.346803	1006.67905	1.0557	0.00053246	-3.8818	-0.0019578	-2.8261	-0.0014253	504.3447732141236	56.244	2.3019	56.803	56.541	58.843	0.55954					121	55	3	0	0	0	0.86786	1	5794	5794		26.796	0	1	1272700	+		35879	19583	23728	23737	40900	40900					0.17598141935934564
LVLVEIGLT	9	Unmodified	_LVLVEIGLT_					0	0	0			REV__ENSG00000197563|ENST00000640252|PIGN	REV__ENSG00000197563|ENST00000640252|PIGN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8052978515625	2	478.804968	955.595384	-0.91897	-0.00044001	3.0146	0.0014434	2.0957	0.0010034	478.8062344602325	41.651	1.2493	41.655	41.077	42.326	0.0044022					74	33	3	0	0	0	0.7932	1	2687	2687		23.042	4.7181	1	258200	+		35880	23245	23729	23738	40901	40901					0.11580985768216578
LVLVIFGN	8	Unmodified	_LVLVIFGN_					0	0	0			REV__ENSG00000221855|ENST00000408916|TAS2R41	REV__ENSG00000221855|ENST00000408916|TAS2R41	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77008056640625	2	437.773471	873.53239	-1.5161	-0.00066369	-3.9886	-0.0017461	-5.5047	-0.0024098	437.77165455530013	42.195	1.723	42.892	42.344	44.067	0.69754					85	42	3	0	0	0	0.85277	1	3803	3803		25.45	3.7478	1	1268100	+		35881	23708	23730	23739	40902	40902					0.0905646477085611
LVLVLQLN	8	Unmodified	_LVLVLQLN_					0	0	0			REV__nc|ENSG00000126217|O15068-2|MCF2L	REV__nc|ENSG00000126217|O15068-2|MCF2L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30072021484375	2	456.299853	910.585153	-1.7927	-0.00081802	3.97	0.0018115	2.1773	0.00099349	456.30151188064457	45.052	1.9056	45.052	44.154	46.06	0					117	46	3	0	0	0	0.884	1	3392	3392		33.516	0	1	498210	+		35882	29826	23731	23740	40903	40903					0.1262842283366581
LVLVPKGKTRM	11	Unmodified	_LVLVPKGKTRM_					0	0	0		ENST00000446105.6_1_12:6761840-6762457:-|nuORF;ENST00000444704.5_1_12:6761840-6762457:-|nuORF	ENST00000446105.6_1_12:6761840-6762457:-|nuORF	ENST00000446105.6_1_12:6761840-6762457:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3926391601562	2	621.391751	1240.76895	-1.2196	-0.00075786	2.6368	0.0016385	1.4171	0.0008806	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.7342	1	11066	11066		25.574	2.0514	1	23459000			35883	11813	23732	23741	40904	40904					0.15819448272850423
LVLVQLEP	8	Unmodified	_LVLVQLEP_					0	0	0			REV__ENST00000548511.5_1_12:88429578-88437530:+|nuORF	REV__ENST00000548511.5_1_12:88429578-88437530:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.7842712402344	2	455.784036	909.553519	0.22092	0.00010069	1.0481	0.00047773	1.2691	0.00057842	455.78429383584523	43.788	2.2099	43.762	42.925	45.135	-0.026768					87	51	2	0	0	0	0.79929	1	3353	3353		18.324	0	1	242760	+		35884	28575	23733	23742	40905	40905					0.0951243007971243
LVLVRTVPAQR	11	Unmodified	_LVLVRTVPAQR_					0	0	0			REV__ENST00000484427.5_1_20:47835892-47850293:+|nuORF	REV__ENST00000484427.5_1_20:47835892-47850293:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.386474609375	2	626.398422	1250.78229	1.3699	0.00085812	-3.4518	-0.0021622	-2.0818	-0.0013041	626.3960367869279	109.98	0.78311	110.11	109.72	110.51	0.12289					43	29	2	0	0	0	0.68378	1	11794	11794		34.173	12.213	1	2615600	+		35885	18574	23734	23743	40906	40906					0.16693022376466615
LVLVSRCI	8	Unmodified	_LVLVSRCI_					0	0	0			REV__ENST00000546481.1_1_12:57881846-57882986:+|nuORF	REV__ENST00000546481.1_1_12:57881846-57882986:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.77984619140625	2	451.778231	901.541908	0.99248	0.00044838	3.0988	0.0014	4.0913	0.0018484	451.77963856381217	86.78	1.6717	86.706	86.227	87.899	-0.074005					91	38	4	0	0	0	0.89962	1	8954	8954		38.806	8.3025	1	335390	+		35886	28539	23735	23744	40907	40907					0.08719909784736046
LVLVTPFVF	9	Unmodified	_LVLVTPFVF_					0	0	0		ENSG00000180974|ENST00000641726|OR52E4	ENSG00000180974|ENST00000641726|OR52E4	ENSG00000180974|ENST00000641726|OR52E4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	517.8192138671875	2	517.817879	1033.6212	-0.046234	-2.3941E-05	2.4114	0.0012486	2.3651	0.0012247	517.8189821353725	93.25	1.5107	93.32	92.756	94.266	0.06987					100	35	4	0	0	0	0.7932	1	9691	9691		26.796	5.0938	1	1007500			35887	7363	23736	23745	40908	40908					0.10573880010497305
LVLVVFPDM	9	Unmodified	_LVLVVFPDM_					0	0	0			REV__ENSG00000165841|ENST00000371321|CYP2C19	REV__ENSG00000165841|ENST00000371321|CYP2C19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7936401367188	2	516.793546	1031.57254	1.557	0.00080467	-1.7163	-0.00088696	-0.15923	-8.2287E-05	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.7932	1	9308	9308		25.45	0.93098	1	834930	+		35888	21227	23737	23746	40909	40909					0.05801643379095367
LVLVYIVK	8	Unmodified	_LVLVYIVK_					0	0	0			REV__ENSG00000063127|ENST00000335875|SLC6A16	REV__ENSG00000063127|ENST00000335875|SLC6A16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.8232116699219	2	473.820421	945.62629	0.060079	2.8467E-05	2.6015	0.0012327	2.6616	0.0012611	473.8215272662652	37.926	1.0316	37.901	37.348	38.38	-0.025417					40	23	2	0	0	0	0.80963	1	2523	2523		15.636	0.97212	1	79119	+		35889	16468	23738	23747	40910	40910					0.1513018387312286
LVLWVRAVPV	10	Unmodified	_LVLWVRAVPV_					0	0	0			REV__ENSG00000146678|ENST00000275525|IGFBP1	REV__ENSG00000146678|ENST00000275525|IGFBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3707885742188	2	576.368601	1150.72265	0.35965	0.00020729	0.12398	7.1455E-05	0.48363	0.00027875	576.3684427135254	43.121	1.8301	43.178	42.557	44.387	0.056744					99	45	3	0	0	0	0.85939	1	2936	2936		23.042	1.0826	1	329330	+		35890	20026	23739	23748	40911	40911					0.15331751433086538
LVLYSLSILL	10	Unmodified	_LVLYSLSILL_					0	0	0			REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	REV__ENST00000530958.5_1_11:108094184-108094271:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3629150390625	2	567.36265	1132.71075	0.36025	0.00020439	1.3571	0.00076996	1.7173	0.00097435	567.3632714206227	44.36	2.296	44.409	43.67	45.966	0.048996					151	56	4	0	0	0	0.84112	1	3185	3185		37.159	0	1	1558100	+		35891	28290	23740	23749	40912	40912					0.14970089899247796
LVMDNHRALKV	11	Unmodified	_LVMDNHRALKV_					0	0	0		ENST00000465717.1_1_1:170508572-170508710:+|nuORF;ENST00000367763.7_2_1:170508440-170511675:+|nuORF	ENST00000465717.1_1_1:170508572-170508710:+|nuORF	ENST00000465717.1_1_1:170508572-170508710:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59771728515625	3	432.579935	1294.71798	0.73458	0.00031777	-0.049887	-2.158E-05	0.6847	0.00029619	432.57938390900136	106.27	0.21381	106.37	106.31	106.52	0.099007					8	4	2	0	0	0	0.1725	1	11374	11374		9.2118	0	1	40853			35892	10569	23741	23750	40913	40913					0.08240499227963483
LVMKVKQEKP	10	Unmodified	_LVMKVKQEKP_					0	0	0		ENSG00000196456|ENST00000329630|ZNF775	ENSG00000196456|ENST00000329630|ZNF775	ENSG00000196456|ENST00000329630|ZNF775	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9139404296875	3	400.577531	1198.71076	3.4048	0.0013639	3.7899	0.0015182	7.1947	0.002882	400.578997947783	111.61	0.85251	111.65	111	111.85	0.041832					50	28	2	0	0	0	0.86698	1	13485	13485		28.081	3.8497	1	3662700			35893	8059	23742	23751	40914	40914					0.11935766627561861
LVMKVKQEKP	10	Unmodified	_LVMKVKQEKP_					0	0	0		ENSG00000196456|ENST00000329630|ZNF775	ENSG00000196456|ENST00000329630|ZNF775	ENSG00000196456|ENST00000329630|ZNF775	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5798034667969	3	400.577531	1198.71076	3.4037	0.0013634	4.207	0.0016852	7.6107	0.0030487	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.86698	1	13731	13731		28.081	0.43757	1	5321000			35894	8059	23742	23751	40915	40915					0.11935766627561861
LVMNIKVG	8	Unmodified	_LVMNIKVG_					0	0	0		ENST00000361464.7_1_10:103544260-103544341:-|nuORF	ENST00000361464.7_1_10:103544260-103544341:-|nuORF	ENST00000361464.7_1_10:103544260-103544341:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26544189453125	2	437.264956	872.515359	1.7524	0.00076626	-0.40991	-0.00017924	1.3425	0.00058702	437.264848658338	24.04	1.4327	23.526	22.938	24.371	-0.51365					98	32	5	0	0	0	0.82464	1	1184	1184		21.702	2.3424	1	13559000			35895	10476	23743	23752	40916	40916					0.07400220893396181
LVMSQVMEKPV	11	Oxidation (M)	_LVM(Oxidation (M))SQVMEKPV_		LVM(1)SQVMEKPV		LVM(72)SQVM(-72)EKPV	0	0	1		ENST00000435366.2_2_20:33865064-33865489:-|nuORF	ENST00000435366.2_2_20:33865064-33865489:-|nuORF	ENST00000435366.2_2_20:33865064-33865489:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	638.8349609375	2	638.835617	1275.65668	1.5107	0.00096509	-1.3877	-0.00088654	0.12296	7.8554E-05	638.8343540273713	74.714	0.84661	74.841	74.555	75.402	0.1271					66	22	4	0	0	0	0.13035	1	6927	6927		85.862	7.598	2	652180			35896	11707	23744	23753	40917	40917		185			0.02987806413693761
LVMSQVMEKPV	11	Oxidation (M)	_LVM(Oxidation (M))SQVMEKPV_		LVM(1)SQVMEKPV		LVM(70)SQVM(-70)EKPV	0	0	1		ENST00000435366.2_2_20:33865064-33865489:-|nuORF	ENST00000435366.2_2_20:33865064-33865489:-|nuORF	ENST00000435366.2_2_20:33865064-33865489:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	638.8347778320312	2	638.835617	1275.65668	-0.69863	-0.00044631	0.72049	0.00046027	0.021859	1.3964E-05	638.835717832915	74.828	1.0238	74.914	74.628	75.651	0.085907					67	27	4	0	0	0	0.22372	1	6897	6897		78.264	7.4476	2	647960			35897	11707	23744	23753	40918	40918		185			0.02987806413693761
LVMYSSIFV	9	Unmodified	_LVMYSSIFV_					0	0	0			REV__ENST00000569969.5_2_16:28986191-28992937:+|nuORF	REV__ENST00000569969.5_2_16:28986191-28992937:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.7816772460938	2	529.783179	1057.5518	-0.13962	-7.3969E-05	-3.8254	-0.0020266	-3.965	-0.0021006	529.7810141350252	55.485	1.008	55.548	55.314	56.322	0.063721					89	41	3	0	0	0	0.78536	1	4678	4678		29.15	1.0681	1	562490	+		35898	21593	23745	23754	40919	40919					0.025330529994334938
LVNASRQGI	9	Unmodified	_LVNASRQGI_					0	0	0		nc|ENSG00000085721|Q9NYV6-4|RRN3	nc|ENSG00000085721|Q9NYV6-4|RRN3	nc|ENSG00000085721|Q9NYV6-4|RRN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27655029296875	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.69624	1	10279	10279		40.778	2.9666	1	6350300			35899	14792	23746	23755	40920	40920					0.06031992020336929
LVNDDDEEAD	10	Unmodified	_LVNDDDEEAD_					0	0	0		nc|ENSG00000065548|Q8WU90-2|ZC3H15;ENSG00000065548|ENST00000337859|ZC3H15	nc|ENSG00000065548|Q8WU90-2|ZC3H15	nc|ENSG00000065548|Q8WU90-2|ZC3H15	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.32958984375	2	567.725298	1133.43604	0.60479	0.00034335	4.2434	0.0024091	4.8482	0.0027525	567.7270519625255	93.643	0.42767	94.08	93.723	94.151	0.43744					12	9	2	0	0	0	0.37624	1	11207	11207		35.152	8.4591	1	77871			35900	1134	23747	23756	40921	40921					-0.12533844108384073
LVNEGRPRIKT	11	Unmodified	_LVNEGRPRIKT_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8853759765625	2	641.883136	1281.75172	-0.050098	-3.2157E-05	-0.96956	-0.00062234	-1.0197	-0.0006545	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.7434	1	10519	10519		23.523	0.94304	1	3644700			35901	6838	23748	23757	40922	40922					0.12211243991396259
LVNFKLFNF	9	Unmodified	_LVNFKLFNF_					0	0	0			REV__ENSG00000069943|ENST00000164305|PIGB	REV__ENSG00000069943|ENST00000164305|PIGB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.3229370117188	2	571.32386	1140.63317	0.53951	0.00030824	-4.3447	-0.0024822	-3.8052	-0.002174	571.3212757910784	64.451	0.72825	65.004	64.641	65.37	0.55386					52	17	4	0	0	0	0.31972	1	6987	6987		63.306	6.674	1	859150	+		35902	16588	23749	23758	40923	40923					0.06847496753698579
LVNGVITILSV	11	Unmodified	_LVNGVITILSV_					0	0	0			REV__ENSG00000184984|ENST00000383263|CHRM5	REV__ENSG00000184984|ENST00000383263|CHRM5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.3560180664062	2	564.355357	1126.69616	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.44	1	116.4	115.9	116.9	-0.037872								0	0	0	0.56276	1	13965	13965		14.137	1.9303	1		+		35903	22719	23750	23759	40924	40924					0.13788017751085135
LVNHKKLM	8	Unmodified	_LVNHKKLM_					0	0	0		ENST00000524193.1_1_8:38663126-38677066:+|nuORF	ENST00000524193.1_1_8:38663126-38677066:+|nuORF	ENST00000524193.1_1_8:38663126-38677066:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7960510253906	2	491.796955	981.579357	-0.71044	-0.00034939	-1.7767	-0.00087377	-2.4871	-0.0012232	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.85277	1	4126	4126		25.45	0	1	571510			35904	13212	23751	23760	40925	40925					0.08783001050346684
LVNHRRTH	8	Unmodified	_LVNHRRTH_					0	0	0		nc|ENSG00000167395|O15015-1|ZNF646;ENSG00000167395|ENST00000300850|ZNF646	nc|ENSG00000167395|O15015-1|ZNF646	nc|ENSG00000167395|O15015-1|ZNF646	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7933959960938	2	516.794124	1031.57369	-0.047501	-2.4548E-05	-1.2119	-0.00062632	-1.2594	-0.00065086	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.884	1	8940	8940		33.516	0.70317	1	692890			35905	6291	23752	23761	40926	40926					0.05917038582879286
LVNHRRTH	8	Unmodified	_LVNHRRTH_					0	0	0		nc|ENSG00000167395|O15015-1|ZNF646;ENSG00000167395|ENST00000300850|ZNF646	nc|ENSG00000167395|O15015-1|ZNF646	nc|ENSG00000167395|O15015-1|ZNF646	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7935791015625	2	516.794124	1031.57369	0.70992	0.00036688	-2.0068	-0.0010371	-1.2969	-0.00067023	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.87479	1	8831	8831		30.504	7.4612	1	842420			35906	6291	23752	23761	40927	40927					0.05917038582879286
LVNIFGGIVN	10	Unmodified	_LVNIFGGIVN_					0	0	0		ENST00000307241.5_1_12:94942028-94943309:+|nuORF;ENSG00000172340|ENST00000307227|SUCLG2;nc|ENSG00000172340|Q96I99-2|SUCLG2	ENST00000307241.5_1_12:94942028-94943309:+|nuORF	ENST00000307241.5_1_12:94942028-94943309:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.30322265625	2	523.305667	1044.59678	-1.4863	-0.0007778	-2.6443	-0.0013838	-4.1306	-0.0021616	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.82886	1	8393	8393		37.812	0	1	3566700			35907	6763	23753	23762	40928	40928					0.0762661985700106
LVNIFGGIVN	10	Unmodified	_LVNIFGGIVN_					0	0	0		ENST00000307241.5_1_12:94942028-94943309:+|nuORF;ENSG00000172340|ENST00000307227|SUCLG2;nc|ENSG00000172340|Q96I99-2|SUCLG2	ENST00000307241.5_1_12:94942028-94943309:+|nuORF	ENST00000307241.5_1_12:94942028-94943309:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3035888671875	2	523.305667	1044.59678	-0.50611	-0.00026485	-3.5572	-0.0018615	-4.0633	-0.0021264	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.86763	1	10040	10040		26.693	2.4902	1	3970100			35908	6763	23753	23762	40929	40929					0.0762661985700106
LVNKKRYPSL	10	Unmodified	_LVNKKRYPSL_					0	0	0			REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|110|2|sense	REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|110|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.91754150390625	3	406.583674	1216.72919	-0.18598	-7.5617E-05	0.82063	0.00033365	0.63465	0.00025804	406.58388358790285	111.36	0.14371	111.3	111.23	111.37	-0.059937					6	3	2	0	0	0	0.85834	1	12121	12121		22.58	5.4129	1	427860	+		35909	29481	23754	23763	40930	40930					0.12949644593800258
LVNKLGQVF	9	Unmodified	_LVNKLGQVF_					0	0	0		ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.3057861328125	2	509.30821	1016.60187	-0.80877	-0.00041191	-3.7898	-0.0019302	-4.5986	-0.0023421	509.30614096875837	93.406	1.6722	93.406	92.938	94.61	0					114	38	4	0	0	0	0.78058	1	9207	9207		30.504	2.6214	1	1703100			35910	8983	23755	23764	40931	40931					0.09422923719603205
LVNKNLNSN	9	Unmodified	_LVNKNLNSN_					0	0	0		ENSG00000182218|ENST00000330710|HHIPL1;nc|ENSG00000182218|Q96JK4-2|HHIPL1	ENSG00000182218|ENST00000330710|HHIPL1	ENSG00000182218|ENST00000330710|HHIPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2796630859375	2	508.28018	1014.54581	0.22565	0.0001147	-0.11322	-5.7546E-05	0.11244	5.715E-05	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.69624	1	9055	9055		40.778	1.972	1	1820400			35911	7434	23756	23765	40932	40932					0.03911670812135526
LVNMLLPGD	9	Unmodified	_LVNMLLPGD_					0	0	0		ENSG00000257743|ENST00000477922|MGAM2	ENSG00000257743|ENST00000477922|MGAM2	ENSG00000257743|ENST00000477922|MGAM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.266845703125	2	486.265153	970.515753	-0.087647	-4.262E-05	4.2523	0.0020678	4.1647	0.0020251	486.26710603472304	86.356	4.0954	86.423	85.117	89.212	0.067444					314	95	4	0	0	0	0.74721	1	8854	8854		37.159	4.4086	1	1700900			35912	8908	23757	23766	40933	40933					0.029315958225879513
LVNPVQLSAPR	11	Unmodified	_LVNPVQLSAPR_					0	0	0			REV__nc|ENSG00000115966|P15336-3|ATF2	REV__nc|ENSG00000115966|P15336-3|ATF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8560791015625	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.69931	1	9502	9502		31.634	1.3165	1	18777000	+		35913	18165	23758	23767	40934	40934					0.10416767697074647
LVNRTLIFMA	10	Unmodified	_LVNRTLIFMA_					0	0	0			REV__ENSG00000184478|ENST00000641160|OR56A3	REV__ENSG00000184478|ENST00000641160|OR56A3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3438110351562	2	589.341726	1176.6689	-0.3676	-0.00021664	2.4536	0.001446	2.086	0.0012294	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.86471	1	9608	9608		30.318	1.1477	1	11103000	+		35914	22684	23759	23768	40935	40935					0.08763210939082455
LVNRTLIFMA	10	Unmodified	_LVNRTLIFMA_					0	0	0			REV__ENSG00000184478|ENST00000641160|OR56A3	REV__ENSG00000184478|ENST00000641160|OR56A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3424072265625	2	589.341726	1176.6689	-0.67475	-0.00039766	2.4486	0.0014431	1.7739	0.0010454	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.86718	1	9591	9591		27.882	1.1893	1	5429300	+		35915	22684	23759	23768	40936	40936					0.08763210939082455
LVNRTLIFMA	10	Unmodified	_LVNRTLIFMA_					0	0	0			REV__ENSG00000184478|ENST00000641160|OR56A3	REV__ENSG00000184478|ENST00000641160|OR56A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3427124023438	2	589.341726	1176.6689	-0.6745	-0.00039751	2.6065	0.0015361	1.932	0.0011386	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.77314	2	9702	9702;9725		40.778	11.608	1	16185000	+		35916	22684	23759	23768	40937;40938	40937					0.08763210939082455
LVNRTLIFMA	10	Unmodified	_LVNRTLIFMA_					0	0	0			REV__ENSG00000184478|ENST00000641160|OR56A3	REV__ENSG00000184478|ENST00000641160|OR56A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.343017578125	2	589.341726	1176.6689	2.2135	0.0013045	-0.53137	-0.00031316	1.6821	0.00099136	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.8651	1	9653	9653		25.574	1.3713	1	5579200	+		35917	22684	23759	23768	40939	40939					0.08763210939082455
LVNRTLIFMA	10	Unmodified	_LVNRTLIFMA_					0	0	0			REV__ENSG00000184478|ENST00000641160|OR56A3	REV__ENSG00000184478|ENST00000641160|OR56A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.342529296875	2	589.341726	1176.6689	2.472	0.0014569	-0.53238	-0.00031375	1.9396	0.0011431	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.8651	1	9919	9919		25.574	2.9944	1	16740000	+		35918	22684	23759	23768	40940	40940					0.08763210939082455
LVNRTLIFMA	10	Unmodified	_LVNRTLIFMA_					0	0	0			REV__ENSG00000184478|ENST00000641160|OR56A3	REV__ENSG00000184478|ENST00000641160|OR56A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3414306640625	2	589.341726	1176.6689	0.81285	0.00047905	0.87586	0.00051618	1.6887	0.00099523	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.86718	2	9154	9154;9165		27.882	2.3082	1	6450100	+		35919	22684	23759	23768	40941;40942	40941					0.08763210939082455
LVNRTLIFMA	10	Unmodified	_LVNRTLIFMA_					0	0	0			REV__ENSG00000184478|ENST00000641160|OR56A3	REV__ENSG00000184478|ENST00000641160|OR56A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.34326171875	2	589.341726	1176.6689	-1.324	-0.0007803	3.288	0.0019378	1.964	0.0011575	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86218	2	9782	9782;9806		32.812	6.1195	1	17904000	+		35920	22684	23759	23768	40943;40944	40943					0.08763210939082455
LVNRTLIFMA	10	Unmodified	_LVNRTLIFMA_					0	0	0			REV__ENSG00000184478|ENST00000641160|OR56A3	REV__ENSG00000184478|ENST00000641160|OR56A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3429565429688	2	589.341726	1176.6689	0.15554	9.1664E-05	1.9962	0.0011764	2.1517	0.0012681	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.86218	1	11164	11164		32.812	3.6424	1	10540000	+		35921	22684	23759	23768	40945	40945					0.08763210939082455
LVNSIVLEFTT	11	Unmodified	_LVNSIVLEFTT_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.345458984375	2	618.347729	1234.6809	0.55169	0.00034113	-3.5035	-0.0021664	-2.9518	-0.0018253	618.3454418699644	97.724	3.0702	97.772	96.827	99.897	0.048157					199	71	4	0	0	0	0.72739	1	10357	10357		27.047	0.25122	1	831610			35922	7954	23760	23769	40946	40946					0.07295106163223863
LVNTLKNNPRD	11	Unmodified	_LVNTLKNNPRD_					0	0	0		nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;ENSG00000048991|ENST00000683871|R3HDM1	nc|ENSG00000048991|Q15032-2|R3HDM1	nc|ENSG00000048991|Q15032-2|R3HDM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3632202148438	2	642.356951	1282.69935	6.9532	0.0044665	0.8975	0.00057651	7.8507	0.005043	643.3583899198403	109.87	1.5654	109.94	109.77	111.34	0.068001					57	20	3	0	0	0	0.67778	1	13367	13367		35.152	0.97948	1	2295800			35923	980	23761	23770	40947	40947					0.06930660857779003
LVNVLILE	8	Unmodified	_LVNVLILE_					0	0	0			REV__ENST00000342988.7_1_18:48573606-48575086:+|nuORF	REV__ENST00000342988.7_1_18:48573606-48575086:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7908020019531	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.89043	1	3057	3057		35.618	3.6634	1	605230	+		35924	25282	23762	23771	40948	40948					0.10984716596749422
LVNVNIAAR	9	Unmodified	_LVNVNIAAR_					0	0	0			REV__ENSG00000174123|ENST00000308973|TLR10	REV__ENSG00000174123|ENST00000308973|TLR10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7187805175781	2	485.295633	968.576714	-1.6628	-0.00080696	1.7338	0.00084143	0.071014	3.4463E-05	485.2964244475944	97.184	2.1182	97.386	96.488	98.606	0.20207					59	48	2	0	0	0	0.20789	1	10103	10103		29.15	6.1071	1	217960	+		35925	21974	23763	23772	40949	40949					0.09116868917033116
LVNVNIAAR	9	Unmodified	_LVNVNIAAR_					0	0	0			REV__ENSG00000174123|ENST00000308973|TLR10	REV__ENSG00000174123|ENST00000308973|TLR10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	485.295633	968.576714	2.2705	0.0011018	-2.0678	-0.0010035	0.20264	9.8342E-05	485.2945524168605	97.319	1.9196	97.264	96.457	98.377	-0.055542	-0.062405	-0.0024554	NaN	21.96	54	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171950	+		35926	21974	23763	23772							0.09116868917033116
LVNVNIAAR	9	Unmodified	_LVNVNIAAR_					0	0	0			REV__ENSG00000174123|ENST00000308973|TLR10	REV__ENSG00000174123|ENST00000308973|TLR10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	485.295633	968.576714	-0.80541	-0.00039086	0.98454	0.00047779	0.17913	8.6931E-05	485.29605961818197	97.224	1.9289	97.272	96.57	98.499	0.048157	-0.054116	0.0005072	NaN	21.96	54	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188290	+		35927	21974	23763	23772							0.09116868917033116
LVNVQLIL	8	Unmodified	_LVNVQLIL_					0	0	0			REV__ENST00000303115.7_1_5:35878241-35878331:+|nuORF	REV__ENST00000303115.7_1_5:35878241-35878331:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3011169433594	2	456.299853	910.585153	-0.40408	-0.00018438	3.3963	0.0015497	2.9922	0.0013653	456.3012719086531	32.915	1.5209	33.085	32.546	34.067	0.16971					108	35	4	0	0	0	0.86791	1	2323	2323		28.254	1.4582	1	2612400	+		35928	24793	23764	23773	40950	40950					0.1262842283365444
LVNYWQHDLY	10	Unmodified	_LVNYWQHDLY_					0	0	0			REV__ENST00000437114.5_1_2:144987871-144993284:-|nuORF	REV__ENST00000437114.5_1_2:144987871-144993284:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2230529785156	3	450.887422	1349.64044	-2.0961	-0.00094509	-1.053	-0.00047477	-3.149	-0.0014199	450.88646077353667	25.395	2.3857	25.395	23.994	26.38	0					149	107	2	0	0	0	0.86621	1	903	903		26.063	5.7484	1	77595	+		35929	26702	23765	23774	40951	40951					-0.020398154365238952
LVPATLWPHN	10	Unmodified	_LVPATLWPHN_					0	0	0			REV__ENST00000561055.1_1_14:24734823-24735783:-|nuORF	REV__ENST00000561055.1_1_14:24734823-24735783:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3195190429688	2	574.316566	1146.61858	0.81882	0.00047026	4.2826	0.0024596	5.1014	0.0029298	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.86452	1	9686	9686		30.504	0.18592	1	1866200	+		35930	28774	23766	23775	40952	40952					0.051134246055880794
LVPCSRKLH	9	Unmodified	_LVPCSRKLH_					0	0	0			REV__nc|ENSG829|Q9HDB9|ERVK-5_gag	REV__nc|ENSG829|Q9HDB9|ERVK-5_gag	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.807861328125	2	526.805311	1051.59607	2.0771	0.0010942	2.3488	0.0012374	4.4259	0.0023316	526.8065947880607	99.033	1.2732	99.395	98.525	99.798	0.36137					108	31	5	0	0	0	0.12652	5	11980	11921;11932;11956;11980;11992		87.754	18.479	1	32054000	+		35931	30316	23767	23776	40953;40954;40955;40956;40957	40956					0.07233501936298126
LVPCSRKLH	9	Unmodified	_LVPCSRKLH_					0	0	0			REV__nc|ENSG829|Q9HDB9|ERVK-5_gag	REV__nc|ENSG829|Q9HDB9|ERVK-5_gag	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8084716796875	2	526.805311	1051.59607	2.118	0.0011158	2.2135	0.0011661	4.3315	0.0022818	526.8064931441075	99.786	1.2202	100.12	99.379	100.6	0.33295					60	16	4	0	0	0	0.33718	1	12064	12064		62.107	1.1355	1	16521000	+		35932	30316	23767	23776	40958	40958					0.07233501936298126
LVPCSRKLH	9	Unmodified	_LVPCSRKLH_					0	0	0			REV__nc|ENSG829|Q9HDB9|ERVK-5_gag	REV__nc|ENSG829|Q9HDB9|ERVK-5_gag	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8084716796875	2	526.805311	1051.59607	1.8843	0.00099267	2.449	0.0012902	4.3333	0.0022828	526.806675241247	99.062	1.2342	99.425	98.602	99.837	0.36292					102	30	5	0	0	0	0.17307	4	12030	11965;11994;12030;12042		79.451	18.479	1	32274000	+		35933	30316	23767	23776	40959;40960;40961;40962	40961					0.07233501936298126
LVPCSRKLH	9	Unmodified	_LVPCSRKLH_					0	0	0			REV__nc|ENSG829|Q9HDB9|ERVK-5_gag	REV__nc|ENSG829|Q9HDB9|ERVK-5_gag	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8080444335938	2	526.805311	1051.59607	2.1724	0.0011444	2.2081	0.0011632	4.3805	0.0023076	526.806498827833	99.792	0.95116	100.16	99.637	100.59	0.36292					61	16	4	0	0	0	0.17307	2	12066	12066;12102		79.451	0	1	16717000	+		35934	30316	23767	23776	40963;40964	40963					0.07233501936298126
LVPCSRKLH	9	Unmodified	_LVPCSRKLH_					0	0	0			REV__nc|ENSG829|Q9HDB9|ERVK-5_gag	REV__nc|ENSG829|Q9HDB9|ERVK-5_gag	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8082885742188	2	526.805311	1051.59607	2.4511	0.0012913	1.6759	0.00088286	4.127	0.0021741	526.8063545435555	100.49	2.2675	100.83	100.38	102.64	0.34591					144	58	4	0	0	0	0.19818	5	12246	12174;12234;12246;12258;12270		74.255	10.856	1	37709000	+		35935	30316	23767	23776	40965;40966;40967;40968;40969	40967					0.07233501936298126
LVPEREIKGT	10	Unmodified	_LVPEREIKGT_					0	0	0		ENST00000313143.7_1_3:183888627-183888867:+|nuORF	ENST00000313143.7_1_3:183888627-183888867:+|nuORF	ENST00000313143.7_1_3:183888627-183888867:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3309936523438	2	571.332413	1140.65027	0.55864	0.00031917	-3.1127	-0.0017784	-2.554	-0.0014592	571.3306168800059	102.04	2.573	102.24	101.51	104.08	0.19484					133	63	4	0	0	0	0.86047	1	10724	10724		23.523	2.5758	1	4021100			35936	9947	23768	23777	40970	40970					0.08557372568861865
LVPGAGRAR	9	Unmodified	_LVPGAGRAR_					0	0	0		ENST00000518479.5_2_8:28196600-28196786:+|nuORF	ENST00000518479.5_2_8:28196600-28196786:+|nuORF	ENST00000518479.5_2_8:28196600-28196786:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.2586669921875	2	448.774868	895.535184	1.3657	0.00061288	-2.7835	-0.0012492	-1.4178	-0.00063629	448.7736549527136	90.074	0.86073	90.004	89.698	90.559	-0.069977					25	19	2	0	0	0	0.20789	1	9481	9481		5.9211	4.9242	1	43826			35937	13117	23769	23778	40971	40971					0.08323732948372253
LVPGRHDI	8	Unmodified	_LVPGRHDI_					0	0	0		ENSG00000077312|ENST00000243563|SNRPA;ENST00000407763.2_1_6:149433147-149433330:-|nuORF;ENSG00000125870|ENST00000246071|SNRPB2	ENSG00000077312|ENST00000243563|SNRPA	ENSG00000077312|ENST00000243563|SNRPA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7195129394531	2	453.761426	905.5083	-0.60971	-0.00027666	1.908	0.00086579	1.2983	0.00058913	453.76145814023465	32.785	0.46629	32.912	32.677	33.144	0.12642					14	10	2	0	0	0	0.4196	1	2315	2315		38.806	0	1	85380			35938	1379	23770	23779	40972	40972					0.051766243371730525
LVPILVARTR	10	Unmodified	_LVPILVARTR_					0	0	0		ENSG00000170876|ENST00000306077|TMEM43	ENSG00000170876|ENST00000306077|TMEM43	ENSG00000170876|ENST00000306077|TMEM43	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8533935546875	2	569.376958	1136.73936	-1.3892	-0.00079096	0.64664	0.00036818	-0.74252	-0.00042277	569.3774800887219	102.07	0.20449	102.2	102.02	102.22	0.13569					6	4	2	0	0	0	0.37624	1	10652	10652		20.947	6.0821	1	90767			35939	6620	23771	23780	40973	40973					0.1764625231901391
LVPIPKVE	8	Unmodified	_LVPIPKVE_					0	0	0			REV__ENST00000397601.5_1_13:98044058-98044163:+|nuORF	REV__ENST00000397601.5_1_13:98044058-98044163:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.7771301269531	2	447.786579	893.558604	-1.2534	-0.00056126	1.8292	0.0008191	0.5758	0.00025784	447.78725522614	41.18	2.9113	41.139	40.185	43.097	-0.04081					147	74	3	0	0	0	0.4196	1	3325	3325		25.45	0	1	795630	+		35940	26171	23772	23781	40974	40974					0.1075673394233263
LVPIPKVEGRM	11	Unmodified	_LVPIPKVEGRM_					0	0	0			REV__ENST00000397601.5_1_13:98044058-98044163:+|nuORF	REV__ENST00000397601.5_1_13:98044058-98044163:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8698120117188	2	619.868108	1237.72166	1.2588	0.00078029	1.242	0.00076985	2.5008	0.0015501	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.75921	1	11635	11635		19.997	0	1	4742500	+		35941	26171	23773	23782	40975	40975					0.11231169001871422
LVPKEVAL	8	Unmodified	_LVPKEVAL_					0	0	0			REV__ENSG00000183354|ENST00000399933|KIAA2026	REV__ENSG00000183354|ENST00000399933|KIAA2026	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.780029296875	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.88915	1	2575	2575		35.201	1.6851	1	8013100	+		35942	22601	23774	23783	40976	40976					0.10388447425270897
LVPLAVIVAI	10	Unmodified	_LVPLAVIVAI_					0	0	0		nc|ENSG00000100197|P10635-2|CYP2D6;ENSG00000100197|ENST00000645361|CYP2D6	nc|ENSG00000100197|P10635-2|CYP2D6	nc|ENSG00000100197|P10635-2|CYP2D6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3477783203125	2	504.346803	1006.67905	2.0026	0.00101	0.50234	0.00025335	2.5049	0.0012633	504.34690233028635	36.516	1.5993	36.956	36.186	37.785	0.44043					102	38	4	0	0	0	0.85976	1	2907	2907		35.201	8.4046	1	2044400			35943	1807	23775	23784	40977	40977					0.17598141935934564
LVPLGPHDAL	10	Unmodified	_LVPLGPHDAL_					0	0	0		nc|ENSG00000177595|Q9HB75-5|PIDD1;ENST00000534525.5_1_11:799959-803120:-|nuORF;nc|ENSG00000177595|Q9HB75-4|PIDD1;ENST00000524486.5_1_11:799309-803120:-|nuORF;nc|ENSG00000177595|Q9HB75-3|PIDD1;nc|ENSG00000177595|Q9HB75-2|PIDD1;ENSG00000177595|ENST00000347755|PIDD1;nc|ENSG00000177595|Q9HB75-7|PIDD1;ENST00000527357.5_1_11:801679-803120:-|nuORF	nc|ENSG00000177595|Q9HB75-5|PIDD1	nc|ENSG00000177595|Q9HB75-5|PIDD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.294921875	2	516.297842	1030.58113	-0.37711	-0.0001947	3.2912	0.0016992	2.9141	0.0015045	516.2998075146065	62.799	1.3838	63.187	62.708	64.092	0.38779					58	31	3	0	0	0	0.28443	1	6726	6726		73.975	3.1585	1	306010			35944	13409	23776	23785	40978	40978					0.06706333339934645
LVPLSLDLF	9	Unmodified	_LVPLSLDLF_					0	0	0			REV__nc|ENSG00000156256|Q9Y5T5-4|USP16	REV__nc|ENSG00000156256|Q9Y5T5-4|USP16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.8076171875	2	508.804968	1015.59538	0.84862	0.00043178	3.9625	0.0020161	4.8111	0.0024479	508.8072597473503	83.541	2.7911	83.472	82.015	84.806	-0.069313					129	64	3	0	0	0	0.76996	1	8518	8518		33.516	5.6333	1	2497800	+		35945	20477	23777	23786	40979	40979					0.08820985768227274
LVPLVLLRQML	11	Unmodified	_LVPLVLLRQML_					0	0	0		nc|ENSG00000099968|Q9BXK5-2|BCL2L13;ENSG00000099968|ENST00000317582|BCL2L13	nc|ENSG00000099968|Q9BXK5-2|BCL2L13	nc|ENSG00000099968|Q9BXK5-2|BCL2L13	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.5977783203125	3	432.280826	1293.82065	-0.17045	-7.3682E-05	0.82617	0.00035714	0.65573	0.00028346	432.2805129321909	106.71	0.99863	106.68	106.21	107.21	-0.034401					31	22	2	0	0	0	0.1745	1	11650	11650		23.378	4.8469	1	123470			35946	1780	23778	23787	40980	40980					0.18549191966758372
LVPLVLSGA	9	Unmodified	_LVPLVLSGA_					0	0	0			REV__ENSG00000103335|ENST00000301015|PIEZO1	REV__ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77838134765625	2	434.778754	867.542954	0.15311	6.6568E-05	3.0229	0.0013143	3.176	0.0013809	434.7799826029187	37.007	1.7817	37.018	36.075	37.857	0.011173					164	39	5	0	0	0	0.7932	1	2331	2331		26.796	1.3459	1	5259900	+		35947	17405	23779	23788	40981	40981					0.10388447425293634
LVPNGAIPQ	9	Unmodified	_LVPNGAIPQ_					0	0	0		nc|ENSG00000107731|Q8IZJ1-2|UNC5B;ENSG00000107731|ENST00000335350|UNC5B	nc|ENSG00000107731|Q8IZJ1-2|UNC5B	nc|ENSG00000107731|Q8IZJ1-2|UNC5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.7630920410156	2	454.763635	907.512717	-0.87729	-0.00039896	0.10816	4.9188E-05	-0.76913	-0.00034977	454.76364990871195	47.486	0.78397	48.409	48.12	48.904	0.92315					52	19	4	0	0	0	0.51307	1	4551	4551		51.335	10.763	1	6225300			35948	2361	23780	23789	40982	40982					0.055260887600866226
LVPPLWKTVW	10	Unmodified	_LVPPLWKTVW_					0	0	0		L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|26|1|sense;L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|56|1|sense	L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|26|1|sense	L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|26|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8695068359375	2	619.868434	1237.72232	0.5439	0.00033715	0.95442	0.00059161	1.4983	0.00092876	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.84112	1	11185	11185		37.159	5.6293	1	1280900			35949	14646	23781	23790	40983	40983					0.11296331713197105
LVPQTVMTGL	10	Unmodified	_LVPQTVMTGL_					0	0	0			REV__nc|ENSG00000143442|Q7Z3K3-7|POGZ	REV__nc|ENSG00000143442|Q7Z3K3-7|POGZ	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.762939453125	2	529.79936	1057.58417	0.9846	0.00052164	1.321	0.00069984	2.3056	0.0012215	529.8007490009545	85.786	1.6333	85.844	84.936	86.569	0.057899					45	31	2	0	0	0	0.37624	1	8594	8594		26.693	0	1	61538	+		35950	19811	23782	23791	40984	40984					0.057678404024500196
LVPQTVMTGL	10	Unmodified	_LVPQTVMTGL_					0	0	0			REV__nc|ENSG00000143442|Q7Z3K3-7|POGZ	REV__nc|ENSG00000143442|Q7Z3K3-7|POGZ	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	529.79936	1057.58417	1.4477	0.00076701	0.36222	0.0001919	1.81	0.00095891	530.30024182565	85.894	1.1594	85.821	85.32	86.48	-0.073761	-0.011507	-0.00053422	NaN	26.693	29	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54513	+		35951	19811	23782	23791							0.057678404024500196
LVPSAGRR	8	Unmodified	_LVPSAGRR_					0	0	0		ENST00000377047.8_1_13:93879520-93879592:+|nuORF	ENST00000377047.8_1_13:93879520-93879592:+|nuORF	ENST00000377047.8_1_13:93879520-93879592:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.261474609375	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.89494	1	9366	9366		37.159	2.9866	1	55300000			35952	10826	23783	23792	40985	40985					0.0755604405703707
LVPSGLPEF	9	Unmodified	_LVPSGLPEF_					0	0	0		ENSG00000006607|ENST00000264042|FARP2;nc|ENSG00000006607|O94887-3|FARP2;nc|ENSG00000006607|O94887-2|FARP2	ENSG00000006607|ENST00000264042|FARP2	ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.76544189453125	2	479.765843	957.517133	0.362	0.00017367	-0.42141	-0.00020218	-0.059411	-2.8503E-05	479.76554242222454	80.347	1.3373	80.767	80.171	81.508	0.41948					69	31	3	0	0	0	0.69914	1	9196	9196		40.573	3.4135	1	4919900			35953	704	23784	23793	40986	40986					0.03667553182992833
LVPSGLPEF	9	Unmodified	_LVPSGLPEF_					0	0	0		ENSG00000006607|ENST00000264042|FARP2;nc|ENSG00000006607|O94887-3|FARP2;nc|ENSG00000006607|O94887-2|FARP2	ENSG00000006607|ENST00000264042|FARP2	ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.76544189453125	2	479.765843	957.517133	-0.7446	-0.00035723	0.67391	0.00032332	-0.070684	-3.3912E-05	479.76609977021917	80.277	1.2892	80.803	80.317	81.607	0.52676					70	30	4	0	0	0	0.28875	1	9274	9274		65.803	15.779	1	5775600			35954	704	23784	23793	40987	40987					0.03667553182992833
LVPSKKAKLYM	11	Unmodified	_LVPSKKAKLYM_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.59454345703125	3	426.593181	1276.75771	-0.47921	-0.00020443	3.5104	0.0014975	3.0312	0.0012931	426.5946424263707	33.571	1.0016	33.514	33.214	34.216	-0.056385					58	22	4	0	0	0	0.55601	1	2038	2038		42.243	0	1	557890	+		35955	22085	23785	23794	40988	40988					0.13040626178712955
LVPSLQLI	8	Unmodified	_LVPSLQLI_					0	0	0			REV__ENST00000314103.5_1_21:37757678-37758388:+|nuORF	REV__ENST00000314103.5_1_21:37757678-37758388:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7879943847656	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.87064	1	3291	3291		29.15	3.6994	1	403970	+		35956	24931	23786	23795	40989	40989					0.11308733942325944
LVPSSISVML	10	Unmodified	_LVPSSISVML_					0	0	0			REV__ENSG00000231925|ENST00000434618|TAPBP	REV__ENSG00000231925|ENST00000434618|TAPBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303955078125	2	523.301736	1044.58892	-0.040375	-2.1128E-05	3.8736	0.002027	3.8332	0.0020059	523.3035989730673	101.38	1.8608	101.41	100.39	102.25	0.031036					84	43	4	0	0	0	0.85694	1	10811	10811		21.96	0	1	1068900	+		35957	23766	23787	23796	40990	40990					0.06840724545213561
LVPSSISVML	10	Unmodified	_LVPSSISVML_					0	0	0			REV__ENSG00000231925|ENST00000434618|TAPBP	REV__ENSG00000231925|ENST00000434618|TAPBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3035888671875	2	523.301736	1044.58892	-0.178	-9.3149E-05	3.4267	0.0017932	3.2487	0.0017	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.86589	1	8396	8396		29.15	0	1	4158500	+		35958	23766	23787	23796	40991	40991					0.06840724545213561
LVPSSISVML	10	Unmodified	_LVPSSISVML_					0	0	0			REV__ENSG00000231925|ENST00000434618|TAPBP	REV__ENSG00000231925|ENST00000434618|TAPBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3038330078125	2	523.301736	1044.58892	0.71899	0.00037625	2.71	0.0014182	3.429	0.0017944	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.74274	1	9281	9281		42.396	1.618	1	13442000	+		35959	23766	23787	23796	40992	40992					0.06840724545213561
LVPTGLLY	8	Unmodified	_LVPTGLLY_					0	0	0			REV__ENSG00000121904|ENST00000373381|CSMD2	REV__ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26361083984375	2	438.265479	874.516405	-1.8646	-0.00081717	-3.5126	-0.0015394	-5.3771	-0.0023566	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.86791	1	2946	2946		28.254	1.4582	1	3384400	+		35960	18472	23788	23797	40993	40993					0.07412758533951092
LVPTIACPGT	10	Unmodified	_LVPTIACPGT_					0	0	0		ENST00000519948.3_1_12:74934905-74935118:+|nuORF	ENST00000519948.3_1_12:74934905-74935118:+|nuORF	ENST00000519948.3_1_12:74934905-74935118:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.2670593261719	2	486.265153	970.515753	0.08019	3.8993E-05	3.8106	0.0018529	3.8908	0.0018919	486.2668793256364	86.146	4.4086	86.59	84.867	89.275	0.44331					281	107	4	0	0	0	0.85934	1	10042	10042		35.618	0	1	1279400			35961	13150	23789	23798	40994	40994					0.0293159582259932
LVPTIPTT	8	Unmodified	_LVPTIPTT_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.2541809082031	2	421.255111	840.49567	0.58556	0.00024667	-3.0592	-0.0012887	-2.4737	-0.001042	421.25366472055117	84.161	1.6821	84.309	83.832	85.514	0.14794					87	38	3	0	0	0	0.85277	1	8166	8166		25.45	1.2474	1	609670	+		35962	18287	23790	23799	40995	40995					0.06904168154278523
LVPTNDAKEK	10	Unmodified	_LVPTNDAKEK_					0	0	0			REV__nc|ENSG00000164221|Q8NEF3|CCDC112	REV__nc|ENSG00000164221|Q8NEF3|CCDC112	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.8094482421875	2	557.808771	1113.60299	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.49	1	17.49	16.99	17.99	0								0	0	0	0.45132	1	215	215		22.58	0.61977	1		+		35963	21053	23791	23800	40996	40996					0.050730932978467536
LVPVILKMSD	10	Unmodified	_LVPVILKMSD_					0	0	0			REV__nc|ENSG00000076944|Q15833-3|STXBP2	REV__nc|ENSG00000076944|Q15833-3|STXBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.8301391601562	2	557.83066	1113.64677	3.0808	0.0017186	-2.699	-0.0015056	0.38182	0.00021299	557.8291525228157	101	1.6416	100.95	100.53	102.17	-0.052116					75	38	3	0	0	0	0.86763	1	10974	10974		26.693	1.1189	1	714690	+		35964	29713	23792	23801	40997	40997					0.09448986470647469
LVPVILKMSD	10	Unmodified	_LVPVILKMSD_					0	0	0			REV__nc|ENSG00000076944|Q15833-3|STXBP2	REV__nc|ENSG00000076944|Q15833-3|STXBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.8319702148438	2	557.83066	1113.64677	0.85904	0.0004792	-0.64336	-0.00035889	0.21568	0.00012031	557.8303228390891	100.95	1.6407	101.1	100.55	102.19	0.14352					87	39	3	0	0	0	0.85251	1	10624	10624		19.997	0	1	700710	+		35965	29713	23792	23801	40998	40998					0.09448986470647469
LVPVILKMSD	10	Unmodified	_LVPVILKMSD_					0	0	0			REV__nc|ENSG00000076944|Q15833-3|STXBP2	REV__nc|ENSG00000076944|Q15833-3|STXBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	557.8310546875	2	557.83066	1113.64677	-1.4267	-0.00079583	1.7845	0.00099542	0.3578	0.00019959	557.8315827372627	100.97	1.6229	101.12	100.62	102.24	0.15505					78	39	3	0	0	0	0.8505	3	10563	10474;10486;10563		34.173	7.4796	1	900390	+		35966	29713	23792	23801	40999;41000;41001	41001					0.09448986470647469
LVPVLSNKNN	10	Unmodified	_LVPVLSNKNN_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.3181762695312	2	549.319306	1096.62406	-0.48303	-0.00026534	-2.2746	-0.0012495	-2.7576	-0.0015148	549.3179926126767	101.27	2.2263	101.27	100.73	102.96	0					128	54	4	0	0	0	0.86763	1	10318	10318		26.693	4.733	1	1196600			35967	2259	23793	23802	41002	41002					0.0796110339738334
LVPVPAASLR	10	Unmodified	_LVPVPAASLR_					0	0	0		ENST00000429770.5_2_3:50402382-50403264:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.81988525390625	2	511.821484	1021.62842	0.41163	0.00021068	-1.6694	-0.00085442	-1.2577	-0.00064374	511.82049110618453	79.343	0.76666	79.892	79.615	80.382	0.54945					45	17	3	0	0	0	0.6116	1	9144	9144		49.442	8.6634	1	1191300			35968	11615	23794	23803	41003	41003					0.11846612610941065
LVPVPAASLR	10	Unmodified	_LVPVPAASLR_					0	0	0		ENST00000429770.5_2_3:50402382-50403264:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.8196716308594	2	511.821484	1021.62842	0.42568	0.00021787	0.448	0.0002293	0.87369	0.00044717	511.82056424567674	80.07	1.0991	80.597	80.062	81.161	0.52677					61	18	4	0	0	0	0.86452	1	9200	9200		30.504	2.6214	1	579840			35969	11615	23794	23803	41004	41004					0.11846612610941065
LVPVSRALPAR	11	Unmodified	_LVPVSRALPAR_					0	0	0		nc|ENSG00000058600|Q9NVU0-3|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF	nc|ENSG00000058600|Q9NVU0-3|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.334228515625	2	589.87204	1177.72953	-0.41738	-0.0002462	0.16157	9.5304E-05	-0.25581	-0.0001509	589.8720087594791	78.515	0.7178	78.925	78.551	79.269	0.41059					21	16	2	0	0	0	0.17245	1	8974	8974		37.812	6.2817	1	52902			35970	13880	23795	23804	41005	41005					0.14777064313648225
LVQARIRPLDS	11	Unmodified	_LVQARIRPLDS_					0	0	0			REV__ENSG00000204518|ENST00000376221|AADACL4	REV__ENSG00000204518|ENST00000376221|AADACL4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3756103515625	2	634.377686	1266.74082	-1.1774	-0.00074689	0.2391	0.00015168	-0.93826	-0.00059521	634.3776925529805	109.87	1.6182	109.87	109.32	110.94	0.0060425					148	63	3	0	0	0	0.72918	1	11693	11693		26.693	3.1702	1	2778200	+		35971	23501	23796	23805	41006	41006					0.11811841617122809
LVQARIRPLDS	11	Unmodified	_LVQARIRPLDS_					0	0	0			REV__ENSG00000204518|ENST00000376221|AADACL4	REV__ENSG00000204518|ENST00000376221|AADACL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3751220703125	2	634.377686	1266.74082	2.1873	0.0013876	-2.6623	-0.0016889	-0.47502	-0.00030134	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.6921	1	13418	13418		32.812	3.6424	1	6886400	+		35972	23501	23796	23805	41007	41007					0.11811841617122809
LVQKFHVQY	9	Unmodified	_LVQKFHVQY_					0	0	0		nc|ENSG00000163697|Q92870-3|APBB2;nc|ENSG00000163697|Q92870-2|APBB2;nc|ENSG00000163697|Q92870|APBB2;ENSG00000163697|ENST00000508593|APBB2	nc|ENSG00000163697|Q92870-3|APBB2	nc|ENSG00000163697|Q92870-3|APBB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.8291015625	2	581.324391	1160.63423	0.19884	0.00011559	-0.010805	-6.2812E-06	0.18804	0.00010931	581.3241550069021	63.873	0.6954	63.839	63.484	64.179	-0.034256					60	21	3	0	0	0	0.77546	1	6111	6111		31.955	0.42505	1	337800			35973	5854	23797	23806	41008	41008					0.0603371112260902
LVQLLVSP	8	Unmodified	_LVQLLVSP_					0	0	0		nc|ENSG00000186007|Q68G75-4|LEMD1;nc|ENSG00000186007|Q68G75-5|LEMD1;ENSG00000186007|ENST00000367153|LEMD1	nc|ENSG00000186007|Q68G75-4|LEMD1	nc|ENSG00000186007|Q68G75-4|LEMD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801208496094	2	434.778754	867.542954	-1.3516	-0.00058764	3.9223	0.0017053	2.5707	0.0011177	434.78034506978366	39.667	1.8641	39.623	39.121	40.985	-0.043697					176	46	5	0	0	0	0.88915	1	2906	2906		35.201	0	1	3943300			35974	7768	23798	23807	41009	41009					0.10388447425282266
LVQLLVSP	8	Unmodified	_LVQLLVSP_					0	0	0		nc|ENSG00000186007|Q68G75-4|LEMD1;nc|ENSG00000186007|Q68G75-5|LEMD1;ENSG00000186007|ENST00000367153|LEMD1	nc|ENSG00000186007|Q68G75-4|LEMD1	nc|ENSG00000186007|Q68G75-4|LEMD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801818847656	2	434.778754	867.542954	-0.14051	-6.1091E-05	3.4383	0.0014949	3.2978	0.0014338	434.7801225093181	38.257	1.3722	38.268	37.812	39.184	0.011173					116	31	4	0	0	0	0.88915	1	2659	2659		35.201	5.3592	1	2138600			35975	7768	23798	23807	41010	41010					0.10388447425282266
LVQLLVSP	8	Unmodified	_LVQLLVSP_					0	0	0		nc|ENSG00000186007|Q68G75-4|LEMD1;nc|ENSG00000186007|Q68G75-5|LEMD1;ENSG00000186007|ENST00000367153|LEMD1	nc|ENSG00000186007|Q68G75-4|LEMD1	nc|ENSG00000186007|Q68G75-4|LEMD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77972412109375	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.87922	1	3260	3260		31.955	2.1133	1	2165200			35976	7768	23798	23807	41011	41011					0.10388447425282266
LVQLLVSP	8	Unmodified	_LVQLLVSP_					0	0	0		nc|ENSG00000186007|Q68G75-4|LEMD1;nc|ENSG00000186007|Q68G75-5|LEMD1;ENSG00000186007|ENST00000367153|LEMD1	nc|ENSG00000186007|Q68G75-4|LEMD1	nc|ENSG00000186007|Q68G75-4|LEMD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7796630859375	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.884	1	2786	2786		33.516	1.5607	1	2793300			35977	7768	23798	23807	41012	41012					0.10388447425282266
LVQLLVSP	8	Unmodified	_LVQLLVSP_					0	0	0		nc|ENSG00000186007|Q68G75-4|LEMD1;nc|ENSG00000186007|Q68G75-5|LEMD1;ENSG00000186007|ENST00000367153|LEMD1	nc|ENSG00000186007|Q68G75-4|LEMD1	nc|ENSG00000186007|Q68G75-4|LEMD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77569580078125	2	434.778754	867.542954	-1.4872	-0.00064659	2.9694	0.001291	1.4823	0.00064445	434.7799081673859	43.398	0.96524	44.172	43.498	44.463	0.7738					64	23	3	0	0	0	0.88915	1	3914	3914		35.201	1.6851	1	2227600			35978	7768	23798	23807	41013	41013					0.10388447425282266
LVQLRPSGTG	10	Unmodified	_LVQLRPSGTG_					0	0	0			REV__ENSG00000089154|ENST00000300648|GCN1	REV__ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.2996826171875	2	514.298373	1026.58219	-0.73299	-0.00037698	1.1638	0.00059853	0.43078	0.00022155	514.2990191535417	96.746	3.1495	96.746	95.529	98.678	0					118	74	2	0	0	0	0.86763	1	9728	9728		26.693	4.1133	1	424760	+		35979	16963	23799	23808	41014	41014					0.06996547708831713
LVQNEAVFV	9	Unmodified	_LVQNEAVFV_					0	0	0		nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.78546142578125	2	509.782025	1017.5495	4.8147	0.0024544	1.3022	0.00066383	6.1169	0.0031183	509.78234964261355	106.07	0.84253	106.25	105.87	106.71	0.18647					84	35	4	0	0	0	0.62081	1	13001	13001		45.952	5.1738	1	596630			35980	14976	23800	23809	41015	41015					0.04142340585997317
LVQRLRPDFKR	11	Unmodified	_LVQRLRPDFKR_					0	0	0		ENSG00000011198|ENST00000644371|ABHD5	ENSG00000011198|ENST00000644371|ABHD5	ENSG00000011198|ENST00000644371|ABHD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.95806884765625	3	476.624643	1426.8521	-1.6911	-0.000806	-0.59192	-0.00028212	-2.283	-0.0010881	476.6241802064395	112.47	0.71533	112.44	112.25	112.96	-0.032333					34	19	2	0	0	0	0.7896	1	12042	12042		13.508	7.1871	1	354050			35981	783	23801	23810	41016	41016					0.15574901045056322
LVQTLPHARKQ	11	Unmodified	_LVQTLPHARKQ_					0	0	0			REV__ENST00000523863.5_1_8:87386279-87399237:+|nuORF	REV__ENST00000523863.5_1_8:87386279-87399237:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.884521484375	2	645.885678	1289.7568	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.7	1	105.77	105.27	106.27	0.073112								0	0	0	0.56276	1	11214	11214		23.523	0.94304	1		+		35982	28149	23802	23811	41017	41017					0.12351547853995726
LVQVWQLDLK	10	Unmodified	_LVQVWQLDLK_					0	0	0			REV__nc|ENSG00000198682|O95340|PAPSS2	REV__nc|ENSG00000198682|O95340|PAPSS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.5783996582031	3	414.579929	1240.71796	1.0071	0.00041753	-3.2694	-0.0013554	-2.2623	-0.00093789	414.5782673213174	28.214	0.75545	27.965	27.637	28.392	-0.24941					34	18	3	0	0	0	0.81117	1	1697	1697		38.754	4.832	1	181080	+		35983	23354	23803	23812	41018	41018					0.10722822499656104
LVQYKAAF	8	Unmodified	_LVQYKAAF_					0	0	0		ENST00000526204.5_1_8:145650010-145650409:-|nuORF;ENST00000526977.5_1_8:145650235-145651211:-|nuORF;ENSG00000160948|ENST00000292510|VPS28;nc|ENSG00000160948|Q9UK41-2|VPS28;ENST00000528142.5_1_8:145649272-145651551:-|nuORF	ENST00000526204.5_1_8:145650010-145650409:-|nuORF	ENST00000526204.5_1_8:145650010-145650409:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.2682189941406	2	470.268553	938.522553	-0.59682	-0.00028066	0.69957	0.00032898	0.10275	4.8321E-05	470.2687452652717	73.919	2.2099	74.478	73.965	76.174	0.55891					143	55	4	0	0	0	0.9159	1	8372	8372		44.531	3.9584	1	1996400			35984	5615	23804	23813	41019	41019					0.05083276765458322
LVQYYLRWKNM	11	Unmodified	_LVQYYLRWKNM_					0	0	0			REV__nc|ENSG00000226098|P0C7V7|SEC11B	REV__nc|ENSG00000226098|P0C7V7|SEC11B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.6062316894531	3	505.27099	1512.79114	-0.51771	-0.00026158	1.8366	0.00092798	1.3189	0.0006664	505.27175817534743	46.885	0.64396	46.904	46.64	47.284	0.018967					47	17	4	0	0	0	0.75906	1	3473	3473		20.03	2.1973	1	502030	+		35985	30210	23805	23814	41020	41020					0.05525627950578382
LVRAIVSTPVV	11	Unmodified	_LVRAIVSTPVV_					0	0	0			REV__ENST00000454762.1_1_6:43472456-43473590:+|nuORF	REV__ENST00000454762.1_1_6:43472456-43473590:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3663940429688	2	577.368798	1152.72304	-0.31736	-0.00018324	-3.4769	-0.0020075	-3.7943	-0.0021907	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.7342	1	10509	10509		25.574	2.9944	1	6617600	+		35986	19370	23806	23815	41021	41021					0.15279126362247553
LVRDRPSA	8	Unmodified	_LVRDRPSA_					0	0	0			REV__ENST00000317019.2_1_11:130542873-130584089:+|nuORF	REV__ENST00000317019.2_1_11:130542873-130584089:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2631530761719	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.89494	1	7740	7740		37.159	0	1	4597500	+		35987	24958	23807	23816	41022	41022					0.054357228488470355
LVRFTFLPFRQ	11	Unmodified	_LVRFTFLPFRQ_					0	0	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.277587890625	3	475.278473	1422.81359	-0.65142	-0.0003096	0.49548	0.00023549	-0.15594	-7.4114E-05	475.2786104903565	58.659	1.4926	59.051	58.482	59.974	0.39209					112	35	5	0	0	0	0.76579	1	6145	6145		18.531	3.1936	1	2262000	+		35988	16148	23808	23817	41023	41023					0.11909595410543261
LVRGVFMKVV	10	Unmodified	_LVRGVFMKVV_					0	0	0		nc|ENSG00000148655|Q9H2I8|LRMDA;ENST00000593699.5_1_10:77643188-78317043:+|nuORF;ENSG00000148655|ENST00000611255|LRMDA	nc|ENSG00000148655|Q9H2I8|LRMDA	nc|ENSG00000148655|Q9H2I8|LRMDA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3583984375	2	574.354637	1146.69472	2.697	0.001549	-0.48242	-0.00027708	2.2146	0.0012719	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.86718	1	10919	10919		27.882	3.3631	1	738540			35989	4974	23809	23818	41024	41024					0.1272410518131437
LVRGVRGP	8	Unmodified	_LVRGVRGP_					0	0	0		ENST00000303391.10_2_X:153292770-153293031:-|nuORF	ENST00000303391.10_2_X:153292770-153293031:-|nuORF	ENST00000303391.10_2_X:153292770-153293031:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	427.3028564453125	2	427.271961	852.52937	-0.18204	-7.778E-05	-3.526	-0.0015066	-3.7081	-0.0015844	427.26920416841256	68.648	0.18502	68.67	68.539	68.724	0.021599					11	7	2	0	0	0	0.4196	1	6492	6492		12.959	5.2689	1	50947			35990	9834	23810	23819	41025	41025					0.09720634436700948
LVRIKTLEE	9	Unmodified	_LVRIKTLEE_					0	0	0		ENST00000425827.5_1_19:12273930-12280188:+|nuORF	ENST00000425827.5_1_19:12273930-12280188:+|nuORF	ENST00000425827.5_1_19:12273930-12280188:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.8380126953125	2	550.837331	1099.66011	0.15138	8.3386E-05	0.36583	0.00020151	0.51721	0.0002849	550.8375159080202	24.2	0.63874	24.255	23.869	24.508	0.055487					29	14	3	0	0	0	0.71772	1	870	870		39.253	3.6345	1	51828			35991	11538	23811	23820	41026	41026					0.11426560574227551
LVRILSSS	8	Unmodified	_LVRILSSS_					0	0	0			REV__ENST00000378654.8_1_13:48517190-48517361:-|nuORF	REV__ENST00000378654.8_1_13:48517190-48517361:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7713317871094	2	437.77146	873.528367	0.18916	8.281E-05	-0.44353	-0.00019417	-0.25437	-0.00011136	437.77124644611854	39.786	1.476	39.875	39.186	40.662	0.088375					62	41	2	0	0	0	0.83058	1	2487	2487		12.959	0	1	3151300	+		35992	25903	23812	23821	41027	41027					0.0865437527713766
LVRKAKQKKIN	11	Unmodified	_LVRKAKQKKIN_					0	0	0			REV__nc|ENSG00000291004|A6NC78|GOLGA8IP	REV__nc|ENSG00000291004|A6NC78|GOLGA8IP	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.63323974609375	3	442.629506	1324.86669	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.42	1	118.34	117.84	118.84	-0.07531								0	0	0	0.56276	1	12706	12706		14.086	1.1285	1		+		35993	30299	23813	23822	41028	41028					0.21724973193227015
LVRKNREPRFL	11	Unmodified	_LVRKNREPRFL_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1	ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.6244201660156	3	476.624643	1426.8521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.41	1	118.47	117.97	118.97	0.060577								0	0	0	0.56276	1	12464	12464		9.2118	0.80454	1				35994	5087;1741	23814	23823	41029	41029					0.15574901045056322
LVRKRSGG	8	Unmodified	_LVRKRSGG_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.77471923828125	2	436.774868	871.535184	-1.136	-0.00049617	1.2009	0.00052453	0.064932	2.8361E-05	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.89962	1	8841	8841		38.806	9.6566	1	8774400	+		35995	18894	23815	23824	41030	41030					0.09427732948381617
LVRKRSGG	8	Unmodified	_LVRKRSGG_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7747497558594	2	436.774868	871.535184	-0.16229	-7.0884E-05	0.14035	6.1301E-05	-0.021941	-9.5833E-06	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.87479	2	9298	9298;9493		37.028	5.0535	1	15341000	+		35996	18894	23815	23824	41031;41032	41031					0.09427732948381617
LVRLADPVF	9	Unmodified	_LVRLADPVF_					0	0	0		ENSG00000197355|ENST00000409858|UAP1L1;ENST00000474787.1_1_9:139973059-139973974:+|nuORF;nc|ENSG00000197355|Q3KQV9-2|UAP1L1	ENSG00000197355|ENST00000409858|UAP1L1	ENSG00000197355|ENST00000409858|UAP1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3111572265625	2	515.30821	1028.60187	-0.51651	-0.00026616	3.1317	0.0016138	2.6152	0.0013476	515.3096745064526	60.704	1.8309	61.094	60.444	62.275	0.38945					81	51	3	0	0	0	0.47272	1	6531	6531		53.351	2.016	1	1902500			35997	8156	23816	23825	41033	41033					0.08870923719587154
LVRLCRLTS	9	Unmodified	_LVRLCRLTS_					0	0	0			REV__ENST00000560691.5_1_15:71192806-71200991:+|nuORF	REV__ENST00000560691.5_1_15:71192806-71200991:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8207397460938	2	530.818418	1059.62228	0.64668	0.00034327	4.0768	0.002164	4.7235	0.0025073	530.8205589668217	80.04	1.1775	80.181	79.815	80.992	0.14118					115	43	3	0	0	0	0.7932	1	7655	7655		25.574	3.6142	1	892800	+		35998	28766	23817	23826	41034	41034					0.09485771107779328
LVRLFLKAKF	10	Unmodified	_LVRLFLKAKF_					0	0	0		nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1;ENSG00000144426|ENST00000683969|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.766845703125	3	412.27266	1233.79615	-1.9058	-0.0007857	3.5006	0.0014432	1.5949	0.00065751	412.2740918615488	38.176	1.1975	38.193	37.931	39.128	0.016563					48	35	2	0	0	0	0.37624	1	2230	2230		4.0829	0.6742	1	194680			35999	4707	23818	23827	41035	41035					0.1886029987551865
LVRLFLKAKF	10	Unmodified	_LVRLFLKAKF_					0	0	0		nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1;ENSG00000144426|ENST00000683969|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2678527832031	3	412.27266	1233.79615	0.20604	8.4945E-05	0.92152	0.00037992	1.1276	0.00046486	412.27292103220236	42.264	0.36063	42.329	42.031	42.391	0.065037					10	9	2	0	0	0	0.37624	1	2816	2816		11.636	1.0491	1	48073			36000	4707	23818	23827	41036	41036					0.1886029987551865
LVRLLGVC	8	Unmodified	_LVRLLGVC_					0	0	0		nc|ENSG00000178568|Q15303-4|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-2|ERBB4;ENSG00000178568|ENST00000342788|ERBB4;ENST00000484594.5_1_2:212426591-213403254:-|nuORF	nc|ENSG00000178568|Q15303-4|ERBB4	nc|ENSG00000178568|Q15303-4|ERBB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.77301025390625	2	436.772948	871.531344	0.36031	0.00015737	1.5614	0.00068196	1.9217	0.00083933	436.77349327524536	26.738	0.89724	26.766	26.451	27.349	0.028172					66	41	2	0	0	0	0.81724	1	1046	1046		14.664	0	1	200440			36001	7212	23819	23828	41037	41037					0.0904392713028983
LVRLQLCLW	9	Unmodified	_LVRLQLCLW_					0	0	0			REV__ENST00000598494.5_2_19:6466686-6467070:+|nuORF	REV__ENST00000598494.5_2_19:6466686-6467070:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	572.3396606445312	2	572.338987	1142.66342	-1.3795	-0.00078952	3.1341	0.0017938	1.7546	0.0010043	572.3408207070221	101.5	0.80199	101.66	101.28	102.08	0.15505					42	19	3	0	0	0	0.7932	1	10611	10611		24.203	1.6231	1	345060	+		36002	29283	23820	23829	41038	41038					0.09779532147217651
LVRNGSLFI	9	Unmodified	_LVRNGSLFI_					0	0	0			REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8036193847656	2	509.805834	1017.59712	-0.054506	-2.7787E-05	-4.0835	-0.0020818	-4.1381	-0.0021096	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.76255	1	8549	8549		35.618	0.41757	1	828920	+		36003	30256	23821	23830	41039	41039					0.08902039576844345
LVRQRISRLG	10	Unmodified	_LVRQRISRLG_					0	0	0		ENST00000483448.1_1_7:105752534-105753020:-|nuORF;nc|ENSG00000008282|Q16563|SYPL1	ENST00000483448.1_1_7:105752534-105753020:-|nuORF	ENST00000483448.1_1_7:105752534-105753020:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.37939453125	2	599.380563	1196.74657	-0.35766	-0.00021438	-0.43116	-0.00025843	-0.78882	-0.0004728	599.3801693786043	103.37	3.7428	103.41	103.03	106.77	0.041481					250	89	5	0	0	0	0.86763	1	11174	11174		26.693	1.1189	1	13277000			36004	12513	23822	23831	41040	41040					0.15606984919440947
LVRRAALTHN	10	Unmodified	_LVRRAALTHN_					0	0	0		nc|ENSG00000106069|P52757-5|CHN2;nc|ENSG00000106069|P52757-7|CHN2;nc|ENSG00000106069|P52757-8|CHN2;nc|ENSG00000106069|P52757-3|CHN2;ENSG00000106069|ENST00000222792|CHN2;nc|ENSG00000106069|P52757-9|CHN2	nc|ENSG00000106069|P52757-5|CHN2	nc|ENSG00000106069|P52757-5|CHN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8422241210938	2	575.843813	1149.67307	0.91496	0.00052687	-2.3716	-0.0013657	-1.4567	-0.00083881	575.8423131361362	90.432	2.8004	90.479	88.667	91.467	0.046448					215	66	4	0	0	0	0.74274	1	9441	9441		42.396	1.618	1	2025300			36005	2279	23823	23832	41041	41041					0.10422436476960684
LVRRAALTHN	10	Unmodified	_LVRRAALTHN_					0	0	0		nc|ENSG00000106069|P52757-5|CHN2;nc|ENSG00000106069|P52757-7|CHN2;nc|ENSG00000106069|P52757-8|CHN2;nc|ENSG00000106069|P52757-3|CHN2;ENSG00000106069|ENST00000222792|CHN2;nc|ENSG00000106069|P52757-9|CHN2	nc|ENSG00000106069|P52757-5|CHN2	nc|ENSG00000106069|P52757-5|CHN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.8426513671875	2	575.843813	1149.67307	0.47616	0.00027419	-2.8595	-0.0016466	-2.3834	-0.0013724	575.8420203793453	90.225	2.3894	90.676	89.242	91.632	0.45058					94	60	2	0	0	0	0.74274	3	10688	10688;10724;10795		42.396	4.5846	1	1893600			36006	2279	23823	23832	41042;41043;41044	41042					0.10422436476960684
LVRRAALTHN	10	Unmodified	_LVRRAALTHN_					0	0	0		nc|ENSG00000106069|P52757-5|CHN2;nc|ENSG00000106069|P52757-7|CHN2;nc|ENSG00000106069|P52757-8|CHN2;nc|ENSG00000106069|P52757-3|CHN2;ENSG00000106069|ENST00000222792|CHN2;nc|ENSG00000106069|P52757-9|CHN2	nc|ENSG00000106069|P52757-5|CHN2	nc|ENSG00000106069|P52757-5|CHN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8416748046875	2	575.843813	1149.67307	-1.6501	-0.00095021	-0.26578	-0.00015305	-1.9159	-0.0011033	575.8434791868526	90.193	1.8473	90.663	90.18	92.028	0.47068					146	46	4	0	0	0	0.51302	1	10698	10698		54.776	20.604	1	1810000			36007	2279	23823	23832	41045	41045					0.10422436476960684
LVRRELAS	8	Unmodified	_LVRRELAS_					0	0	0			REV__ENSG00000138080|ENST00000380320|EMILIN1	REV__ENSG00000138080|ENST00000380320|EMILIN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2877197265625	2	472.287808	942.561064	-0.97076	-0.00045848	0.82719	0.00039067	-0.14357	-6.7805E-05	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.84341	1	9719	9719		24.203	1.1603	1	26024000	+		36008	19437	23824	23833	41046	41046					0.0874858239999412
LVRRGPGG	8	Unmodified	_LVRRGPGG_					0	0	0		ENST00000471008.5_1_6:30029301-30029535:+|nuORF	ENST00000471008.5_1_6:30029301-30029535:+|nuORF	ENST00000471008.5_1_6:30029301-30029535:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2478942871094	2	406.248486	810.48242	3.1798	0.0012918	-2.835	-0.0011517	0.34482	0.00014008	406.2472019608831	118.01	0.77022	118.03	117.4	118.17	0.026466					37	25	2	0	0	0	0.81724	1	12905	12905		14.664	5.1935	1	37448			36009	12230	23825	23834	41047	41047					0.06959774885569914
LVRRGPGG	8	Unmodified	_LVRRGPGG_					0	0	0		ENST00000471008.5_1_6:30029301-30029535:+|nuORF	ENST00000471008.5_1_6:30029301-30029535:+|nuORF	ENST00000471008.5_1_6:30029301-30029535:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24774169921875	2	406.248486	810.48242	3.1449	0.0012776	-2.7889	-0.001133	0.35606	0.00014465	406.24727030482205	114.56	0.97545	114.57	114.14	115.12	0.0094528					67	46	2	0	0	0	0.85787	1	13795	13795		9.4706	1.2393	1	78189			36010	12230	23825	23834	41048	41048					0.06959774885569914
LVRRLLADELD	11	Unmodified	_LVRRLLADELD_					0	0	0			REV__chr7:6475418-6483967|44|33.41|0.0|21.67|-|1|None,KDELR2|1	REV__chr7:6475418-6483967|44|33.41|0.0|21.67|-|1|None,KDELR2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.59295654296875	3	438.257626	1311.75105	1.6079	0.00070467	-1.4394	-0.00063081	0.16853	7.386E-05	438.2569039821351	29.892	1.3479	29.877	29.524	30.872	-0.015167					99	34	5	0	0	0	0.70584	1	1588	1588		30.569	2.9249	1	559550	+		36011	15910	23826	23835	41049	41049					0.10764404551696316
LVRRLRRQRGR	11	Unmodified	_LVRRLRRQRGR_					0	0	0		ENST00000547344.5_1_12:58159017-58160836:-|nuORF;ENSG00000111012|ENST00000228606|CYP27B1	ENST00000547344.5_1_12:58159017-58160836:-|nuORF	ENST00000547344.5_1_12:58159017-58160836:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.65216064453125	3	489.318548	1464.93381	-1.9764	-0.00096708	4.2325	0.002071	2.2561	0.001104	489.65544335255646	17.157	0.41713	17.157	16.95	17.367	0					39	19	3	0	0	0	0.8498	1	181	181		6.001	0	1	52156			36012	2558	23827	23836	41050	41050					0.21994441247511531
LVRRPLARWS	10	Unmodified	_LVRRPLARWS_					0	0	0			REV__ENST00000486681.5_3_1:2036198-2076794:+|nuORF	REV__ENST00000486681.5_3_1:2036198-2076794:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3838500976562	2	627.383106	1252.75166	0.97949	0.00061452	-2.5587	-0.0016053	-1.5792	-0.00099076	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.8608	1	12574	12574		34.173	3.8548	1	19815000	+		36013	27556	23828	23837	41051	41051					0.1353928878206716
LVRRRVQNG	9	Unmodified	_LVRRRVQNG_					0	0	0			REV__nc|ENSG00000163644|Q8N3J5-3|PPM1K	REV__nc|ENSG00000163644|Q8N3J5-3|PPM1K	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.3348999023438	2	549.336156	1096.65776	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.06	1	118.03	117.53	118.53	-0.030861								0	0	0	0.34348	1	14068	14068		16.473	0.83134	1		+		36014	20953	23829	23838	41052	41052					0.1132956967978771
LVRRVCERWLR	11	Unmodified	_LVRRVCERWLR_					0	0	0			REV__ENST00000565131.5_1_15:76196304-76197948:+|nuORF	REV__ENST00000565131.5_1_15:76196304-76197948:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.95916748046875	3	495.957628	1484.85106	-0.74563	-0.0003698	3.2132	0.0015936	2.4676	0.0012238	495.95916322713595	102.89	1.4225	102.89	101.69	103.11	0					83	35	3	0	0	0	0.80593	1	10469	10469		10.104	0	1	402120	+		36015	21365	23830	23839	41053	41053					0.1280236340448937
LVRTVLLRSLR	11	Unmodified	_LVRTVLLRSLR_					0	0	0		nc|ENSG00000284922|Q8WZ04|TOMT	nc|ENSG00000284922|Q8WZ04|TOMT	nc|ENSG00000284922|Q8WZ04|TOMT	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.63201904296875	3	442.629506	1324.86669	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.96	1	119.99	119.49	120.49	0.026466								0	0	0	0.56276	1	13196	13196		14.694	4.1069	1				36016	15328	23831	23840	41054	41054					0.21724973193204278
LVRVGEDIQL	10	Unmodified	_LVRVGEDIQL_					0	0	0		nc|ENSG00000204290|Q9UIR0-3|BTNL2;nc|ENSG00000204290|Q9UIR0-2|BTNL2;nc|ENSG00000204290|Q9UIR0-1|BTNL2;ENSG00000204290|ENST00000454136|BTNL2;nc|ENSG00000204290|Q9UIR0-4|BTNL2	nc|ENSG00000204290|Q9UIR0-3|BTNL2	nc|ENSG00000204290|Q9UIR0-3|BTNL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.3316650390625	2	571.332413	1140.65027	-1.1055	-0.00063161	-1.221	-0.00069761	-2.3265	-0.0013292	571.3317125893625	102.4	2.1601	102.42	101.65	103.81	0.01989					122	52	4	0	0	0	0.86272	1	11037	11037		24.519	2.5593	1	2384600			36017	8430	23832	23841	41055	41055					0.08557372568861865
LVRVLRRLA	9	Unmodified	_LVRVLRRLA_					0	0	0		ENST00000522601.5_1_8:8094652-8094763:+|nuORF	ENST00000522601.5_1_8:8094652-8094763:+|nuORF	ENST00000522601.5_1_8:8094652-8094763:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3739013671875	2	548.377292	1094.74003	-0.93575	-0.00051314	-4.429	-0.0024288	-5.3648	-0.0029419	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.7932	1	2408	2408		12.959	4.7279	1	651720			36018	13189	23833	23842	41056	41056					0.19645091758752642
LVRVPRPMKVI	11	Unmodified	_LVRVPRPMKVI_					0	0	0		ENST00000573841.5_1_17:80693623-80699341:+|nuORF;ENST00000574496.5_1_17:80693512-80698819:+|nuORF;ENST00000570734.1_2_17:80696358-80706928:+|nuORF;ENSG00000167363|ENST00000300784|FN3K	ENST00000573841.5_1_17:80693623-80699341:+|nuORF	ENST00000573841.5_1_17:80693623-80699341:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26568603515625	3	436.61632	1306.82713	-1.6376	-0.00071502	1.0057	0.00043909	-0.63196	-0.00027592	436.9503228142006	24.401	0.10011	24.46	24.396	24.496	0.058165					5	3	2	0	0	0	0.17863	1	838	838		25.126	23.37	1	10088			36019	6289	23834	23843	41057	41057					0.1859912991812962
LVRVSSGR	8	Unmodified	_LVRVSSGR_					0	0	0			REV__ENST00000523376.5_1_11:14926604-14927012:+|nuORF	REV__ENST00000523376.5_1_11:14926604-14927012:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2635498046875	2	437.266876	872.519199	0.61137	0.00026733	-3.2	-0.0013992	-2.5886	-0.0011319	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.8347	1	792	792		23.042	2.0956	1	1313200	+		36020	28139	23835	23844	41058	41058					0.07784026711476599
LVRVSTSVASA	11	Unmodified	_LVRVSTSVASA_					0	0	0		nc|ENSG00000120334|Q8N0S6-2|CENPL;ENSG00000120334|ENST00000682279|CENPL	nc|ENSG00000120334|Q8N0S6-2|CENPL	nc|ENSG00000120334|Q8N0S6-2|CENPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.32177734375	2	545.316763	1088.61897	0.73643	0.00040159	-0.91435	-0.00049861	-0.17792	-9.7022E-05	545.316117867523	88.493	3.0395	88.643	86.614	89.654	0.15055					258	71	4	0	0	0	0.72106	1	8567	8567		28.081	5.5018	1	5181100			36021	14875	23836	23845	41059	41059					0.07820799534783873
LVRYVHKP	8	Unmodified	_LVRYVHKP_					0	0	0			REV__nc|ENSG00000100379|Q8N5Z5-2|KCTD17	REV__nc|ENSG00000100379|Q8N5Z5-2|KCTD17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3113708496094	2	506.308544	1010.60253	0.34662	0.0001755	0.30467	0.00015426	0.65129	0.00032975	506.81007684679236	49.469	1.8985	49.512	48.558	50.457	0.04224					78	46	2	0	0	0	0.85277	1	3897	3897		25.45	0	1	315680	+		36022	17185	23837	23846	41060	41060					0.0976576315931652
LVSAAAPTAGS	11	Unmodified	_LVSAAAPTAGS_					0	0	0		ENST00000298097.7_1_14:39901070-39901493:-|nuORF	ENST00000298097.7_1_14:39901070-39901493:-|nuORF	ENST00000298097.7_1_14:39901070-39901493:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.75616455078125	2	472.756007	943.497461	0.60168	0.00028445	-0.5705	-0.00026971	0.031184	1.4742E-05	472.75559990844266	25.1	0.58479	25.151	24.858	25.443	0.050451					37	20	2	0	0	0	0.48529	1	986	986		52.937	12.159	1	95939			36023	9769	23838	23847	41061	41061					0.02345177172219337
LVSANQGELL	10	Unmodified	_LVSANQGELL_					0	0	0			REV__ENST00000563666.1_1_16:29808338-29810113:+|nuORF	REV__ENST00000563666.1_1_16:29808338-29810113:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	522.2898559570312	2	522.290214	1042.56587	-0.46339	-0.00024202	0.4746	0.00024788	0.011209	5.8543E-06	522.2903084757713	36.77	0.62352	36.716	36.426	37.049	-0.053558					33	13	3	0	0	0	0.76096	1	2489	2489		41.427	0.64845	1	285150	+		36024	16789	23839	23848	41062	41062					0.04629421752088092
LVSDPLGSL	9	Unmodified	_LVSDPLGSL_					0	0	0			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.75396728515625	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.74721	1	7923	7923		37.159	1.9584	1	394230	+		36025	23985	23840	23849	41063	41063					0.0426296280331826
LVSDPLGSL	9	Unmodified	_LVSDPLGSL_					0	0	0			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.75506591796875	2	450.755475	899.496398	0.64847	0.0002923	-3.528	-0.0015903	-2.8795	-0.001298	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.64922	1	7807	7807		44.117	5.3107	1	162850	+		36026	23985	23840	23849	41064	41064					0.0426296280331826
LVSFLRLGSA	10	Unmodified	_LVSFLRLGSA_					0	0	0			REV__nc|ENSG00000176170|Q9NYA1-2|SPHK1	REV__nc|ENSG00000176170|Q9NYA1-2|SPHK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8171997070312	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.86698	1	8359	8359		28.081	2.5074	1	859730	+		36027	30050	23841	23850	41065	41065					0.09498308748334239
LVSFVERGV	9	Unmodified	_LVSFVERGV_					0	0	0			REV__ENST00000244670.12_1_6:42988481-42988613:+|nuORF	REV__ENST00000244670.12_1_6:42988481-42988613:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	503.79278564453125	2	503.290017	1004.56548	-0.060584	-3.0491E-05	3.163	0.0015919	3.1025	0.0015614	503.29162474587787	109.78	0.70062	109.73	109.4	110.1	-0.055084					61	35	2	0	0	0	0.78058	1	11946	11946		30.504	1.3541	1	1014200	+		36028	24245	23842	23851	41066	41066					0.06338046822907017
LVSGKGEQPK	10	Unmodified	_LVSGKGEQPK_					0	0	0			REV__nc|ENSG00000151612|Q17R98-3|ZNF827	REV__nc|ENSG00000151612|Q17R98-3|ZNF827	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7977905273438	2	521.798206	1041.58186	0.84917	0.00044309	-0.80867	-0.00042196	0.0405	2.1133E-05	521.7976087696168	32.59	0.51046	32.802	32.55	33.061	0.21168					29	11	3	0	0	0	0.47091	1	2314	2314		58.23	8.7884	1	436760	+		36029	20261	23843	23852	41067	41067					0.0627312798899311
LVSHQRIHTG	10	Unmodified	_LVSHQRIHTG_					0	0	0		ENSG00000204611|ENST00000600228|ZNF616	ENSG00000204611|ENST00000600228|ZNF616	ENSG00000204611|ENST00000600228|ZNF616	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3197021484375	2	574.320171	1146.62579	-1.0331	-0.00059332	-0.2741	-0.00015742	-1.3072	-0.00075074	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.86218	1	9792	9792		32.812	2.4947	1	1380900			36030	8466	23844	23853	41068	41068					0.058341572059816826
LVSHSFGG	8	Unmodified	_LVSHSFGG_					0	0	0			REV__ENST00000567020.6_2_16:2546055-2546238:+|nuORF	REV__ENST00000567020.6_2_16:2546055-2546238:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.2044982910156	2	402.205953	802.397353	0.71827	0.00028889	-1.4095	-0.00056691	-0.69122	-0.00027801	402.2053297143551	98.983	1.9796	99.14	98.365	100.34	0.15659					105	45	3	0	0	0	0.88915	1	10312	10312		35.201	1.6851	1	582630	+		36031	28876	23845	23854	41069	41069					-0.011750153708931066
LVSHSFGG	8	Unmodified	_LVSHSFGG_					0	0	0			REV__ENST00000567020.6_2_16:2546055-2546238:+|nuORF	REV__ENST00000567020.6_2_16:2546055-2546238:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.205078125	2	402.205953	802.397353	2.7629	0.0011112	-3.5306	-0.00142	-0.76772	-0.00030878	402.20451588994206	98.39	0.9756	98.751	98.317	99.293	0.36136					52	23	3	0	0	0	0.91005	1	11846	11846		42.474	5.3154	1	832840	+		36032	28876	23845	23854	41070	41070					-0.011750153708931066
LVSHTTVKVAS	11	Unmodified	_LVSHTTVKVAS_					0	0	0			REV__ENSG00000166924|ENST00000300179|NYAP1	REV__ENSG00000166924|ENST00000300179|NYAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.3309326171875	2	571.332413	1140.65027	-1.3827	-0.00078998	-1.153	-0.00065874	-2.5357	-0.0014487	571.3317717910289	102.19	3.5699	102.32	101.59	105.16	0.1357					156	88	4	0	0	0	0.72739	1	10718	10718		27.047	0.3544	1	3715400	+		36033	21339	23846	23855	41071	41071					0.08557372568861865
LVSIMLRSI	9	Unmodified	_LVSIMLRSI_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.317138671875	2	516.31772	1030.62089	0.04847	2.5026E-05	-2.9708	-0.0015339	-2.9223	-0.0015088	516.3158625296053	62.259	1.1248	62.813	62.214	63.339	0.55449					57	25	3	0	0	0	0.54908	1	6701	6701		49.536	10.283	1	588050			36034	3260	23847	23856	41072	41072					0.10680137018994174
LVSLSATES	9	Unmodified	_LVSLSATES_					0	0	0		nc|ENSG00000157368|Q6ZMJ4-2|IL34;ENSG00000157368|ENST00000288098|IL34	nc|ENSG00000157368|Q6ZMJ4-2|IL34	nc|ENSG00000157368|Q6ZMJ4-2|IL34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.244384765625	2	453.742565	905.470577	0.14648	6.6462E-05	1.7675	0.000802	1.914	0.00086846	453.7432039465047	32.295	0.53873	32.289	31.993	32.532	-0.0061455					18	12	2	0	0	0	0.74721	1	1821	1821		37.159	4.3467	1	19175			36035	5424	23848	23857	41073	41073					0.014060685610502333
LVSLSATES	9	Unmodified	_LVSLSATES_					0	0	0		nc|ENSG00000157368|Q6ZMJ4-2|IL34;ENSG00000157368|ENST00000288098|IL34	nc|ENSG00000157368|Q6ZMJ4-2|IL34	nc|ENSG00000157368|Q6ZMJ4-2|IL34	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	453.742565	905.470577	0.081673	3.7058E-05	0.4473	0.00020296	0.52897	0.00024002	453.7430271892488	32.259	0.58477	32.27	31.979	32.564	0.010899	-0.094419	-0.0018587	NaN	37.159	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18163			36036	5424	23848	23857							0.014060685610502333
LVSLSATES	9	Unmodified	_LVSLSATES_					0	0	0		nc|ENSG00000157368|Q6ZMJ4-2|IL34;ENSG00000157368|ENST00000288098|IL34	nc|ENSG00000157368|Q6ZMJ4-2|IL34	nc|ENSG00000157368|Q6ZMJ4-2|IL34	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	453.742565	905.470577	-0.28366	-0.00012871	1.3877	0.00062964	1.104	0.00050093	453.74329314120644	32.416	0.47495	32.362	32.198	32.673	-0.05434	-0.0022631	-0.0010053	NaN	37.159	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24162			36037	5424	23848	23857							0.014060685610502333
LVSLSATES	9	Unmodified	_LVSLSATES_					0	0	0		nc|ENSG00000157368|Q6ZMJ4-2|IL34;ENSG00000157368|ENST00000288098|IL34	nc|ENSG00000157368|Q6ZMJ4-2|IL34	nc|ENSG00000157368|Q6ZMJ4-2|IL34	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	453.742565	905.470577	0.14133	6.4126E-05	3.2711	0.0014843	3.4125	0.0015484	453.7444554052719	32.426	0.054451	32.537	32.5	32.555	0.11117	0.1724	0.00070391	NaN	37.159	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17520			36038	5424	23848	23857							0.014060685610502333
LVSLVGLFLLS	11	Unmodified	_LVSLVGLFLLS_					0	0	0			REV__nc|ENSG00000101276|Q9NQ40-2|SLC52A3	REV__nc|ENSG00000101276|Q9NQ40-2|SLC52A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8660278320312	2	580.8681	1159.72165	-0.64777	-0.00037627	-3.3312	-0.001935	-3.979	-0.0023113	580.8660675480357	62.454	0.90882	63.009	62.214	63.123	0.55449					53	20	3	0	0	0	0.7342	1	6635	6635		25.574	1.0549	1	770700	+		36039	17260	23849	23858	41074	41074					0.14817492273527932
LVSLVYKNTLY	11	Unmodified	_LVSLVYKNTLY_					0	0	0			REV__nc|ENSG00000134490|Q24JQ0-3|TMEM241	REV__nc|ENSG00000134490|Q24JQ0-3|TMEM241	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.257568359375	3	438.255223	1311.74384	1.6079	0.00070467	4.045	0.0017727	5.6529	0.0024774	438.2569039821351	29.892	1.3479	29.877	29.524	30.872	-0.015167					99	34	5	0	0	0	0.69248	1	1525	1525		32.751	8.5187	1	559550	+		36040	19146	23850	23859	41075	41075					0.10043671951279975
LVSPDVRLRQL	11	Unmodified	_LVSPDVRLRQL_					0	0	0			REV__ENST00000297107.10_1_5:153798313-153798457:+|nuORF	REV__ENST00000297107.10_1_5:153798313-153798457:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.392333984375	2	648.393336	1294.77212	-0.0023386	-1.5163E-06	-0.87161	-0.00056515	-0.87395	-0.00056666	648.3926215212863	106.57	0.85555	106.54	106.01	106.87	-0.025146					71	19	4	0	0	0	0.73893	1	11613	11613		24.519	0	1	19156000	+		36041	24722	23851	23860	41076	41076					0.13652414651210165
LVSPDVRLRQL	11	Unmodified	_LVSPDVRLRQL_					0	0	0			REV__ENST00000297107.10_1_5:153798313-153798457:+|nuORF	REV__ENST00000297107.10_1_5:153798313-153798457:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3925170898438	2	648.393336	1294.77212	1.8787	0.0012181	-2.6701	-0.0017313	-0.7914	-0.00051314	648.3914694260502	106.27	0.88895	106.3	105.79	106.67	0.03688					67	20	4	0	0	0	0.72106	1	11640	11640		28.081	0	1	16251000	+		36042	24722	23851	23860	41077	41077					0.13652414651210165
LVSPDVRLRQL	11	Unmodified	_LVSPDVRLRQL_					0	0	0			REV__ENST00000297107.10_1_5:153798313-153798457:+|nuORF	REV__ENST00000297107.10_1_5:153798313-153798457:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.392578125	2	648.393336	1294.77212	1.6039	0.00104	-2.3204	-0.0015045	-0.71644	-0.00046454	648.3917432358439	106.08	2.1363	106.23	104.51	106.65	0.14843					114	53	4	0	0	0	0.72739	1	11364	11364		27.047	0	1	52760000	+		36043	24722	23851	23860	41078	41078					0.13652414651210165
LVSPELKDRKE	11	Unmodified	_LVSPELKDRKE_					0	0	0		nc|ENSG00000168779|O60902-3|SHOX2	nc|ENSG00000168779|O60902-3|SHOX2	nc|ENSG00000168779|O60902-3|SHOX2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.5856628417969	3	438.585632	1312.73507	-1.997	-0.00087587	2.084	0.00091402	0.086983	3.8149E-05	438.58651601334884	31.993	0.97123	31.993	31.701	32.672	0					74	39	2	0	0	0	0.75906	1	1555	1555		20.03	1.4994	1	798930			36044	15083	23852	23861	41079	41079					0.09120698314814035
LVSPELKDRKE	11	Unmodified	_LVSPELKDRKE_					0	0	0		nc|ENSG00000168779|O60902-3|SHOX2	nc|ENSG00000168779|O60902-3|SHOX2	nc|ENSG00000168779|O60902-3|SHOX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.5857849121094	3	438.585632	1312.73507	0.076566	3.3581E-05	-0.063884	-2.8019E-05	0.012682	5.562E-06	438.5856740395665	31.935	0.78642	31.946	31.626	32.413	0.0109					48	21	3	0	0	0	0.71207	1	1759	1759		29.551	0	1	365660			36045	15083	23852	23861	41080	41080					0.09120698314814035
LVSPLFRTV	9	Unmodified	_LVSPLFRTV_					0	0	0		ENST00000392025.5_1_19:41081471-41081663:+|nuORF	ENST00000392025.5_1_19:41081471-41081663:+|nuORF	ENST00000392025.5_1_19:41081471-41081663:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3168334960938	2	516.316035	1030.61752	0.04847	2.5026E-05	0.2935	0.00015154	0.34197	0.00017657	516.3158625296053	62.259	1.1248	62.813	62.214	63.339	0.55449					57	25	3	0	0	0	0.30689	1	6694	6694		64.207	2.516	1	588050			36046	11007	23853	23862	41081	41081					0.10343210236624145
LVSPPISLHI	10	Unmodified	_LVSPPISLHI_					0	0	0		nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1;nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;ENSG00000088827|ENST00000344754|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3270263671875	2	538.329142	1074.64373	0.070125	3.775E-05	-3.4363	-0.0018498	-3.3661	-0.0018121	538.3271728316577	105.51	1.5252	105.66	105	106.53	0.15925					99	38	4	0	0	0	0.8608	1	11260	11260		34.173	9.6534	1	1560600			36047	14795	23854	23863	41082	41082					0.10939479408125408
LVSPPISLHI	10	Unmodified	_LVSPPISLHI_					0	0	0		nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1;nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;ENSG00000088827|ENST00000344754|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3278198242188	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.86718	1	12451	12451		27.882	2.3082	1	4041000			36048	14795	23854	23863	41083	41083					0.10939479408125408
LVSPRHVGG	9	Unmodified	_LVSPRHVGG_					0	0	0		ENST00000588617.1_1_17:57915360-57915432:+|nuORF	ENST00000588617.1_1_17:57915360-57915432:+|nuORF	ENST00000588617.1_1_17:57915360-57915432:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	461.2652587890625	2	461.266876	920.519199	-1.0648	-0.00049114	-3.0408	-0.0014026	-4.1056	-0.0018938	461.26543932022855	93.43	1.414	93.43	92.938	94.352	0					57	32	2	0	0	0	0.76255	1	9226	9226		35.618	1.4457	1	637680			36049	14215	23855	23864	41084	41084					0.055760267114806084
LVSPRHVGG	9	Unmodified	_LVSPRHVGG_					0	0	0		ENST00000588617.1_1_17:57915360-57915432:+|nuORF	ENST00000588617.1_1_17:57915360-57915432:+|nuORF	ENST00000588617.1_1_17:57915360-57915432:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	461.266876	920.519199	1.7427	0.00080384	-5.7883	-0.00267	-4.0456	-0.0018661	461.26406026180877	93.142	1.6342	93.081	92.591	94.226	-0.061432	-0.090207	-0.0020843	NaN	35.618	103	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1239800			36050	14215	23855	23864							0.055760267114806084
LVSQEKGKPG	10	Unmodified	_LVSQEKGKPG_					0	0	0			REV__ENSG00000140955|ENST00000315906|ADAD2	REV__ENSG00000140955|ENST00000315906|ADAD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	521.7977905273438	2	521.798206	1041.58186	-1.6241	-0.00084743	1.2439	0.00064905	-0.38019	-0.00019838	521.7987932436515	33.078	0.55666	33.078	32.798	33.354	0					55	23	3	0	0	0	0.85934	1	1694	1694		35.618	1.4457	1	136310	+		36051	19651	23856	23865	41085	41085					0.06273127989015848
LVSQFGTNVL	10	Unmodified	_LVSQFGTNVL_					0	0	0			REV__nc|ENSG00000138709|Q659C4-2|LARP1B	REV__nc|ENSG00000138709|Q659C4-2|LARP1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.2971801757812	2	539.300581	1076.58661	-1.2259	-0.00066112	0.43156	0.00023274	-0.79432	-0.00042838	539.30071096102	60.728	0.53766	61.117	60.784	61.322	0.38945					33	14	3	0	0	0	0.73395	1	6439	6439		42.864	2.0861	1	718290	+		36052	19498	23857	23866	41086	41086					0.05138012131783398
LVSRLSGAKT	10	Unmodified	_LVSRLSGAKT_					0	0	0			REV__chr5:138419232-138420709|19|10.89|0.41|4.72|+|2|KDM3B,None|1	REV__chr5:138419232-138420709|19|10.89|0.41|4.72|+|2|KDM3B,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3167724609375	2	516.314023	1030.61349	-0.42612	-0.00022001	4.3678	0.0022551	3.9417	0.0020351	516.316116911189	62.433	1.0419	62.821	62.36	63.402	0.3878					60	23	3	0	0	0	0.71918	1	6671	6671		43.651	2.8726	1	684540	+		36053	15848	23858	23867	41087	41087					0.0994112074295117
LVSSAKTK	8	Unmodified	_LVSSAKTK_					0	0	0		nc|ENSG00000083720|P55809-2|OXCT1;ENSG00000083720|ENST00000196371|OXCT1	nc|ENSG00000083720|P55809-2|OXCT1	nc|ENSG00000083720|P55809-2|OXCT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.76104736328125	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.84579	1	609	609		24.519	0	1	867930			36054	1505	23859	23868	41088	41088					0.07886686385813846
LVSSGEGKVR	10	Unmodified	_LVSSGEGKVR_					0	0	0		ENST00000552528.1_1_12:56503657-56504297:+|nuORF	ENST00000552528.1_1_12:56503657-56504297:+|nuORF	ENST00000552528.1_1_12:56503657-56504297:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.296630859375	2	516.29583	1030.57711	0.12873	6.6461E-05	3.4378	0.0017749	3.5666	0.0018414	516.297443605496	62.606	0.69175	63.161	62.777	63.469	0.55449					25	15	2	0	0	0	0.70553	1	6731	6731		44.377	1.981	1	321220			36055	13681	23860	23869	41089	41089					0.06304243846238933
LVSSHRFFK	9	Unmodified	_LVSSHRFFK_					0	0	0			REV__ENSG00000196653|ENST00000436624|ZNF502	REV__ENSG00000196653|ENST00000436624|ZNF502	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.34033203125	2	560.816733	1119.61891	1.3877	0.00077826	4.0569	0.0022752	5.4446	0.0030534	560.8188799731515	90.322	2.675	90.368	88.835	91.51	0.046448					133	63	3	0	0	0	0.20789	1	9213	9213		34.173	7.4796	1	361750	+		36056	23157	23861	23870	41090	41090					0.06388844325419996
LVSSRSFQT	9	Unmodified	_LVSSRSFQT_					0	0	0		ENST00000442175.1_1_X:41958063-41958324:-|nuORF;ENSG00000135390|ENST00000394349|ATP5MC2;nc|ENSG00000135390|Q06055-3|ATP5MC2;nc|ENSG00000135390|Q06055-2|ATP5MC2	ENST00000442175.1_1_X:41958063-41958324:-|nuORF	ENST00000442175.1_1_X:41958063-41958324:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.7757568359375	2	512.774731	1023.53491	-0.41052	-0.0002105	-0.58572	-0.00030034	-0.99624	-0.00051085	512.7745322883873	45.216	0.61684	45.228	44.942	45.559	0.012058					32	14	3	0	0	0	0.71772	1	3264	3264		39.253	3.6345	1	362590			36057	4013	23862	23871	41091	41091					0.024082684378640806
LVSSSIKHRQK	11	Unmodified	_LVSSSIKHRQK_					0	0	0			REV__ENST00000464585.1_1_3:51741837-51742137:+|nuORF	REV__ENST00000464585.1_1_3:51741837-51742137:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8831787109375	2	641.883136	1281.75172	-0.046992	-3.0164E-05	-0.94307	-0.00060534	-0.99006	-0.0006355	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.73893	1	10002	10002		24.519	0	1	2217900	+		36058	27097	23863	23872	41092	41092					0.12211243991396259
LVSSTQLRK	9	Unmodified	_LVSSTQLRK_					0	0	0			REV__nc|ENSG00000130985|P22314-2|UBA1	REV__nc|ENSG00000130985|P22314-2|UBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3171997070312	2	516.314023	1030.61349	-0.42612	-0.00022001	4.3678	0.0022551	3.9417	0.0020351	516.316116911189	62.433	1.0419	62.821	62.36	63.402	0.3878					60	23	3	0	0	0	0.38563	1	6681	6681		58.782	0.53571	1	684540	+		36059	18925	23864	23873	41093	41093					0.09941120742928433
LVSVHPCL	8	Unmodified	_LVSVHPCL_					0	0	0			REV__ENST00000445551.1_1_1:47898899-47899076:-|nuORF	REV__ENST00000445551.1_1_1:47898899-47899076:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.8985595703125	2	434.241481	866.468409	0.54105	0.00023495	4.0806	0.001772	4.6217	0.0020069	434.24307771711284	19.687	0.51731	19.218	18.974	19.491	-0.46967					15	10	2	0	0	0	0.4196	1	578	578		29.842	9.3597	1	51850	+		36060	26796	23865	23874	41094	41094					0.02983361342239732
LVSVLVPLYFY	11	Unmodified	_LVSVLVPLYFY_					0	0	0			REV__ENST00000382247.5_1_4:17805807-17805870:-|nuORF	REV__ENST00000382247.5_1_4:17805807-17805870:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2574462890625	3	438.256564	1311.74786	0.21129	9.2599E-05	2.5281	0.001108	2.7394	0.0012006	438.2576083423229	29.948	1.2574	29.973	29.652	30.909	0.025013					91	35	4	0	0	0	0.72739	1	1549	1549		27.047	1.9213	1	433100	+		36061	25973	23866	23875	41095	41095					0.10445761444998425
LVSVLVPLYFY	11	Unmodified	_LVSVLVPLYFY_					0	0	0			REV__ENST00000382247.5_1_4:17805807-17805870:-|nuORF	REV__ENST00000382247.5_1_4:17805807-17805870:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2571716308594	3	438.256564	1311.74786	-0.3234	-0.00014173	2.9758	0.0013042	2.6524	0.0011624	438.2578505335394	31.282	0.78612	31.231	30.944	31.731	-0.051031					27	18	2	0	0	0	0.78085	1	1768	1768		15.333	0.63944	1	53179	+		36062	25973	23866	23875	41096	41096					0.10445761444998425
LVSWVRHF	8	Unmodified	_LVSWVRHF_					0	0	0			REV__ENST00000471186.5_1_2:118866423-118866534:+|nuORF	REV__ENST00000471186.5_1_2:118866423-118866534:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	522.2901611328125	2	522.292894	1042.57123	-1.5681	-0.00081901	-3.6851	-0.0019247	-5.2532	-0.0027437	522.2908474912587	36.674	0.70448	36.674	36.425	37.13	0					34	15	3	0	0	0	0.93529	1	2134	2134		52.299	7.7681	1	398550	+		36063	27226	23867	23876	41097	41097					0.05165190125217123
LVTAELPALTH	11	Unmodified	_LVTAELPALTH_					0	0	0		nc|ENSG00000197046|Q6ZMC9-2|SIGLEC15;ENSG00000197046|ENST00000389474|SIGLEC15	nc|ENSG00000197046|Q6ZMC9-2|SIGLEC15	nc|ENSG00000197046|Q6ZMC9-2|SIGLEC15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8349609375	2	582.834788	1163.65502	0.11318	6.5963E-05	-3.7555	-0.0021889	-3.6424	-0.0021229	582.8325626554922	94.252	3.4585	94.298	93.323	96.781	0.046173					208	81	3	0	0	0	0.64498	1	9902	9902		39.253	7.6186	1	743970			36064	8127	23868	23877	41098	41098					0.07974256711599992
LVTGLFSA	8	Unmodified	_LVTGLFSA_					0	0	0			REV__ENST00000392562.5_1_17:73401186-73401555:-|nuORF	REV__ENST00000392562.5_1_17:73401186-73401555:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.2345275878906	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.86288	1	8375	8375		26.796	0	1	4227600	+		36065	26023	23869	23878	41099	41099					0.04283612465758324
LVTGLTEVMP	10	Unmodified	_LVTGLTEVMP_					0	0	0			REV__nc|ENSG00000179295|Q06124-3|PTPN11	REV__nc|ENSG00000179295|Q06124-3|PTPN11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.293701171875	2	530.291368	1058.56818	2.0317	0.0010774	1.7176	0.00091081	3.7492	0.0019882	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.85934	1	9674	9674		35.618	2.8059	1	1811300	+		36066	22328	23870	23879	41100	41100					0.041241341655450015
LVTHPKLPTVF	11	Unmodified	_LVTHPKLPTVF_					0	0	0			REV__ENSG00000179057|ENST00000513874|IGSF22	REV__ENSG00000179057|ENST00000513874|IGSF22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.92236328125	3	417.920174	1250.73869	3.1807	0.0013293	1.9124	0.00079924	5.0931	0.0021285	417.9209605426618	105.73	2.7025	105.77	104.99	107.7	0.038322					262	63	6	0	0	0	0.75921	1	11715	11715		17.833	0	1	23553000	+		36067	22313	23871	23880	41101	41101					0.12335412879292562
LVTHVTPMIH	10	Unmodified	_LVTHVTPMIH_					0	0	0			REV__ENSG00000101544|ENST00000262198|ADNP2	REV__ENSG00000101544|ENST00000262198|ADNP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3194580078125	2	574.318251	1146.62195	-1.3729	-0.0007885	3.5235	0.0020236	2.1506	0.0012351	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.85934	1	9648	9648		35.618	1.4457	1	1586900	+		36068	17288	23872	23881	41102	41102					0.05450351387912633
LVTIGHDEY	9	Unmodified	_LVTIGHDEY_					0	0	0			REV__ENSG00000165269|ENST00000297988|AQP7;REV__ENSG00000259916|ENST00000561882|AQP7B	REV__ENSG00000259916|ENST00000561882|AQP7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.76123046875	2	523.761289	1045.50803	-0.042751	-2.2391E-05	-0.43296	-0.00022677	-0.47572	-0.00024916	523.7607727774529	60.587	0.95979	60.575	60.077	61.037	-0.012203					59	22	4	0	0	0	0.62081	1	5597	5597		45.952	5.1738	1	308610	+		36069	21168;23934	23873	23882	41103	41103					-0.01290840173351171
LVTILAPLS	9	Unmodified	_LVTILAPLS_					0	0	0			REV__ENST00000371485.7_1_10:95256438-95259836:+|nuORF	REV__ENST00000371485.7_1_10:95256438-95259836:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.80023193359375	2	463.799686	925.584819	0.23374	0.00010841	1.7317	0.00080317	1.9655	0.00091158	463.8003055874184	41.421	1.4891	41.495	41.009	42.498	0.073418					84	40	3	0	0	0	0.7932	1	2688	2688		23.042	0	1	378670	+		36070	25691	23874	23883	41104	41104					0.11905003113804469
LVTKAKELH	9	Unmodified	_LVTKAKELH_					0	0	0		ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1	ENSG00000067177|ENST00000373542|PHKA1	ENSG00000067177|ENST00000373542|PHKA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8182983398438	2	519.818941	1037.62333	-0.067594	-3.5137E-05	-1.1183	-0.00058132	-1.1859	-0.00061646	519.8182715270425	84.44	1.4919	84.888	84.056	85.547	0.44736					111	36	4	0	0	0	0.15928	2	9899	9779;9899		82.305	6.6991	1	7125200			36071	1178	23875	23884	41105;41106	41106					0.10602308748320866
LVTQLQTRLH	10	Unmodified	_LVTQLQTRLH_					0	0	0			REV__ENST00000296577.8_1_4:146044718-146046167:+|nuORF	REV__ENST00000296577.8_1_4:146044718-146046167:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.5750732421875	3	403.575178	1207.70371	-0.18737	-7.5617E-05	-0.57957	-0.0002339	-0.76694	-0.00030952	403.57484210158276	83.445	2.2034	83.512	82.913	85.116	0.066719					120	50	3	0	0	0	0.81117	1	8293	8293		38.754	1.2454	1	281940	+		36072	24718	23876	23885	41107	41107					0.10816170071370834
LVTQLQTRLH	10	Unmodified	_LVTQLQTRLH_					0	0	0			REV__ENST00000296577.8_1_4:146044718-146046167:+|nuORF	REV__ENST00000296577.8_1_4:146044718-146046167:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5748596191406	3	403.575178	1207.70371	-1.8261	-0.00073697	0.87736	0.00035408	-0.94874	-0.00038289	403.5754952513638	81.706	0.84529	81.851	81.446	82.291	0.14513					69	19	4	0	0	0	0.81117	1	7815	7815		38.754	1.2454	1	2366000	+		36073	24718	23876	23885	41108	41108					0.10816170071370834
LVTQLQTRLH	10	Unmodified	_LVTQLQTRLH_					0	0	0			REV__ENST00000296577.8_1_4:146044718-146046167:+|nuORF	REV__ENST00000296577.8_1_4:146044718-146046167:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5743408203125	3	403.575178	1207.70371	-0.098768	-3.986E-05	-1.4245	-0.00057487	-1.5232	-0.00061473	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.86338	1	9456	9456		31.634	1.0654	1	16485000	+		36074	24718	23876	23885	41109	41109					0.10816170071370834
LVTSKCRL	8	Carbamidomethyl (C)	_LVTSKC(Carbamidomethyl (C))RL_	LVTSKC(1)RL		LVTSKC(71)RL		0	1	0		ENST00000263377.6_1_19:15348671-15349019:-|nuORF	ENST00000263377.6_1_19:15348671-15349019:-|nuORF	ENST00000263377.6_1_19:15348671-15349019:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7828369140625	2	488.784044	975.553536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.99	1	50.438	49.938	50.938	0.44761								0	0	0	0.099423	1	4898	4898		71.378	13.567	1				36075	9460	23877	23886	41110	41110	123				0.06478106808060602
LVTSLALLP	9	Unmodified	_LVTSLALLP_					0	0	0		ENSG00000161692|ENST00000315005|DBF4B	ENSG00000161692|ENST00000315005|DBF4B	ENSG00000161692|ENST00000315005|DBF4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8000793457031	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.7932	1	3638	3638		20.482	0	1	251610			36076	5652	23878	23887	41111	41111					0.11905003113804469
LVTSMLLGCSI	11	Unmodified	_LVTSMLLGCSI_					0	0	0		ENST00000577703.1_1_18:9103009-9103312:+|nuORF	ENST00000577703.1_1_18:9103009-9103312:+|nuORF	ENST00000577703.1_1_18:9103009-9103312:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8074340820312	2	568.806328	1135.5981	0.6781	0.00038571	2.3149	0.0013167	2.993	0.0017024	568.8080202660235	79.546	0.50246	79.685	79.434	79.936	0.13884					28	20	2	0	0	0	0.61369	1	7551	7551		42.864	8.9426	1	67131			36077	14070	23879	23888	41112	41112					0.03572749839236167
LVTSVLSLP	9	Unmodified	_LVTSVLSLP_					0	0	0		ENST00000219235.4_1_16:57397626-57397677:+|nuORF	ENST00000219235.4_1_16:57397626-57397677:+|nuORF	ENST00000219235.4_1_16:57397626-57397677:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.79052734375	2	464.789318	927.564084	-0.072724	-3.3801E-05	3.0915	0.0014369	3.0188	0.0014031	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.7932	1	2083	2083		17.365	0	1	297050			36078	9159	23880	23889	41113	41113					0.09740412734140591
LVTTLPGLF	9	Unmodified	_LVTTLPGLF_					0	0	0		ENST00000295770.3_1_3:31678315-31678555:+|nuORF	ENST00000295770.3_1_3:31678315-31678555:+|nuORF	ENST00000295770.3_1_3:31678315-31678555:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.7918395996094	2	480.791861	959.569169	-0.28471	-0.00013689	-2.2638	-0.0010884	-2.5485	-0.0012253	480.7906313540531	21.803	0.59945	21.742	21.496	22.095	-0.061733					24	18	2	0	0	0	0.7932	1	661	661		24.203	2.5004	1	32616			36079	9721	23881	23890	41114	41114					0.08776716596753431
LVTTQFQIYKL	11	Unmodified	_LVTTQFQIYKL_					0	0	0			REV__ENST00000209929.9_1_1:171154426-171178089:+|nuORF	REV__ENST00000209929.9_1_1:171154426-171178089:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9327087402344	3	451.930739	1352.77039	-0.13819	-6.2454E-05	4.3636	0.0019721	4.2254	0.0019096	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.75121	1	10758	10758		21.78	0.74819	1	924270	+		36080	17048	23882	23891	41115	41115					0.1081136084260379
LVTTQFQIYKL	11	Unmodified	_LVTTQFQIYKL_					0	0	0			REV__ENST00000209929.9_1_1:171154426-171178089:+|nuORF	REV__ENST00000209929.9_1_1:171154426-171178089:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9324035644531	3	451.930739	1352.77039	2.3813	0.0010762	1.9566	0.00088423	4.3378	0.0019604	451.9315121357165	99.085	2.2621	99.03	97.603	99.866	-0.054817					133	52	3	0	0	0	0.74405	2	10806	10674;10806		23.378	0.78116	1	545200	+		36081	17048	23882	23891	41116;41117	41117					0.1081136084260379
LVVAKHIWGDA	11	Unmodified	_LVVAKHIWGDA_					0	0	0			REV__ENSG00000095539|ENST00000210633|SEMA4G	REV__ENSG00000095539|ENST00000210633|SEMA4G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.8463745117188	2	604.842948	1207.67134	1.0466	0.00063305	4.3415	0.0026259	5.3881	0.003259	604.845452875801	96.207	3.1756	96.438	95.308	98.483	0.23103					209	74	4	0	0	0	0.72918	1	9895	9895		26.693	3.1702	1	585990	+		36082	17060	23883	23892	41118	41118					0.07581382668377046
LVVARSIMWS	10	Unmodified	_LVVARSIMWS_					0	0	0			REV__nc|ENSG00000165476|Q6NUK4-2|REEP3	REV__nc|ENSG00000165476|Q6NUK4-2|REEP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.3233642578125	2	581.326076	1160.6376	-0.86868	-0.00050499	-2.0494	-0.0011914	-2.9181	-0.0016964	581.3247028868919	63.922	0.69054	63.922	63.65	64.341	-0.00078583					66	24	3	0	0	0	0.80179	1	5985	5985		39.253	7.723	1	377210	+		36083	21185	23884	23893	41119	41119					0.06370637904956311
LVVCFLLLRY	10	Unmodified	_LVVCFLLLRY_					0	0	0		ENST00000326857.9_1_3:98541165-98544168:-|nuORF	ENST00000326857.9_1_3:98541165-98544168:-|nuORF	ENST00000326857.9_1_3:98541165-98544168:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8690185546875	2	619.87012	1237.72569	-0.30632	-0.00018988	-1.1034	-0.00068399	-1.4098	-0.00087387	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.86452	1	9911	9911		30.504	2.6214	1	2103100			36084	10083	23885	23894	41120	41120					0.11633258495589871
LVVCFLLLRY	10	Unmodified	_LVVCFLLLRY_					0	0	0		ENST00000326857.9_1_3:98541165-98544168:-|nuORF	ENST00000326857.9_1_3:98541165-98544168:-|nuORF	ENST00000326857.9_1_3:98541165-98544168:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8689575195312	2	619.87012	1237.72569	-0.30615	-0.00018977	-0.73712	-0.00045692	-1.0433	-0.00064669	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.86589	1	10014	10014		29.15	2.4566	1	4796900			36085	10083	23885	23894	41121	41121					0.11633258495589871
LVVCFLLLRY	10	Unmodified	_LVVCFLLLRY_					0	0	0		ENST00000326857.9_1_3:98541165-98544168:-|nuORF	ENST00000326857.9_1_3:98541165-98544168:-|nuORF	ENST00000326857.9_1_3:98541165-98544168:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8693237304688	2	619.87012	1237.72569	1.2689	0.00078657	-2.3536	-0.0014589	-1.0847	-0.00067235	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.84112	2	9809	9809;10003		37.159	3.8107	1	6493200			36086	10083	23885	23894	41122;41123	41122					0.11633258495589871
LVVCKKLR	8	Unmodified	_LVVCKKLR_					0	0	0		ENSG00000179934|ENST00000326306|CCR8	ENSG00000179934|ENST00000326306|CCR8	ENSG00000179934|ENST00000326306|CCR8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.93975830078125	2	479.815147	957.615742	-0.94353	-0.00045272	1.6834	0.00080771	0.73984	0.00035499	479.8157475490584	18.137	0.2263	18.182	18.086	18.312	0.044048					16	11	2	0	0	0	0.4196	1	306	306		20.482	12.251	1	35284			36087	7307	23886	23895	41124	41124					0.13523877947045548
LVVCLAFLL	9	Unmodified	_LVVCLAFLL_					0	0	0			REV__ENST00000272793.9_1_2:170930100-170936486:+|nuORF	REV__ENST00000272793.9_1_2:170930100-170936486:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	495.80596923828125	2	495.806457	989.598361	-1.6286	-0.00080749	0.98389	0.00048782	-0.64474	-0.00031967	495.80696727769515	90.909	1.4028	91.089	90.68	92.083	0.18029					60	33	3	0	0	0	0.78292	1	9091	9091		29.842	3.0454	1	403110	+		36088	24550	23887	23896	41125	41125					0.10314537621388808
LVVDHIERQE	10	Unmodified	_LVVDHIERQE_					0	0	0		ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.3322143554688	2	619.330402	1236.64625	-0.67557	-0.0004184	3.9369	0.0024382	3.2613	0.0020198	619.3327788378971	58.365	1.0872	58.758	58.397	59.485	0.39209					65	25	4	0	0	0	0.3985	1	6087	6087		64.207	5.4253	1	3811700			36089	6665	23888	23897	41126	41126					0.037392830751286965
LVVDHIERQE	10	Unmodified	_LVVDHIERQE_					0	0	0		ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	ENSG00000171451|ENST00000310045|DSEL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3339233398438	2	619.330402	1236.64625	0.71947	0.00044559	2.5477	0.0015779	3.2672	0.0020234	619.331937270121	58.256	0.91434	58.809	58.428	59.343	0.55323					67	21	4	0	0	0	0.57924	1	6145	6145		51.193	5.2204	1	3775100			36090	6665	23888	23897	41127	41127					0.037392830751286965
LVVDYRQK	8	Unmodified	_LVVDYRQK_					0	0	0		ENSG00000138035|ENST00000447944|PNPT1	ENSG00000138035|ENST00000447944|PNPT1	ENSG00000138035|ENST00000447944|PNPT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.7627868652344	2	510.795466	1019.57638	-0.74895	-0.00038256	3.6071	0.0018425	2.8582	0.0014599	510.7970732265282	39.649	1.1582	40.203	39.528	40.686	0.55449					48	26	2	0	0	0	0.4196	1	3280	3280		31.955	6.5047	1	174350			36091	4258	23889	23898	41128	41128					0.06737449197180467
LVVDYRQK	8	Unmodified	_LVVDYRQK_					0	0	0		ENSG00000138035|ENST00000447944|PNPT1	ENSG00000138035|ENST00000447944|PNPT1	ENSG00000138035|ENST00000447944|PNPT1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	510.795466	1019.57638	-1.2453	-0.00063607	4.3176	0.0022054	3.0724	0.0015693	510.7975042648267	39.982	1.0733	40.35	39.514	40.587	0.36797	0.073088	0.00022102	NaN	31.955	47	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	276180			36092	4258	23889	23898							0.06737449197180467
LVVEPLALLL	10	Unmodified	_LVVEPLALLL_					0	0	0			REV__ENSG00000170775|ENST00000303921|GPR37	REV__ENSG00000170775|ENST00000303921|GPR37	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.3580322265625	2	540.357368	1078.70018	0.26404	0.00014267	2.2426	0.0012118	2.5067	0.0013545	540.3583702946399	36.686	1.1714	36.789	36.281	37.453	0.10306					78	34	3	0	0	0	0.85438	1	2081	2081		16.473	0	1	384450	+		36093	21685	23890	23899	41129	41129					0.16398107244799576
LVVFEAYLVLF	11	Unmodified	_LVVFEAYLVLF_					0	0	0			REV__ENSG00000163812|ENST00000424952|ZDHHC3	REV__ENSG00000163812|ENST00000424952|ZDHHC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2568359375	3	438.256564	1311.74786	-1.5943	-0.00069873	4.1887	0.0018357	2.5944	0.001137	438.2583289789849	29.969	0.70984	30.036	29.73	30.44	0.066727					92	32	4	0	0	0	0.69931	1	1323	1323		31.634	4.587	1	499410	+		36094	20976	23891	23900	41130	41130					0.10445761444975687
LVVFLANWEF	10	Unmodified	_LVVFLANWEF_					0	0	0			REV__nc|ENSG00000140675|P31639-2|SLC5A2	REV__nc|ENSG00000140675|P31639-2|SLC5A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.3357543945312	2	619.334424	1236.6543	-0.71212	-0.00044104	-2.3634	-0.0014637	-3.0755	-0.0019048	619.3328577487828	60.41	0.6367	60.41	60.144	60.781	0					65	24	4	0	0	0	0.74274	1	5301	5301		42.396	1.618	1	426150	+		36095	19635	23892	23901	41131	41131					0.045434620625201205
LVVFLFYG	8	Unmodified	_LVVFLFYG_					0	0	0		ENSG00000168158|ENST00000304936|OR2C1;ENSG00000174339|ENST00000307832|OR2Y1	ENSG00000168158|ENST00000304936|OR2C1	ENSG00000168158|ENST00000304936|OR2C1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2775573730469	2	479.275847	956.537141	0.29447	0.00014113	3.2442	0.0015549	3.5386	0.001696	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.70106	1	10169	10169		67.327	28.521	1	5642300			36096	6379	23893	23902	41132	41132					0.05713348913604932
LVVGFGAH	8	Unmodified	_LVVGFGAH_					0	0	0			REV__nc|ENSG00000113643|P54136-2|RARS1	REV__nc|ENSG00000113643|P54136-2|RARS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2251892089844	2	400.226688	798.438824	-1.6865	-0.00067499	-0.28364	-0.00011352	-1.9702	-0.00078851	400.22648281591756	40.713	1.6274	41.302	40.835	42.462	0.58915					78	45	3	0	0	0	0.84567	1	3557	3557		24.504	0	1	2567400	+		36097	18004	23894	23903	41133	41133					0.031541653884119114
LVVGGGQRQTF	11	Unmodified	_LVVGGGQRQTF_					0	0	0			REV__ENST00000438807.7_1_19:41937877-41938126:-|nuORF	REV__ENST00000438807.7_1_19:41937877-41938126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.3193969726562	2	581.32238	1160.63021	-0.86869	-0.00050499	4.3098	0.0025054	3.4411	0.0020004	581.3247028868919	63.922	0.69054	63.922	63.65	64.341	-0.00078583					66	24	3	0	0	0	0.65746	1	5930	5930		37.812	0.65241	1	377210	+		36098	26724	23895	23904	41134	41134					0.056316216288678334
LVVGGGQRQTF	11	Unmodified	_LVVGGGQRQTF_					0	0	0			REV__ENST00000438807.7_1_19:41937877-41938126:-|nuORF	REV__ENST00000438807.7_1_19:41937877-41938126:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	581.325439453125	2	581.32238	1160.63021	-0.49301	-0.0002866	4.3268	0.0025153	3.8338	0.0022287	581.3245621009004	63.895	0.60842	63.925	63.588	64.197	0.030247					58	24	3	0	0	0	0.6921	1	5605	5605		32.812	0.061884	1	148510	+		36099	26724	23895	23904	41135	41135					0.056316216288678334
LVVHGGEESF	10	Unmodified	_LVVHGGEESF_					0	0	0			REV__nc|ENSG00000053747|Q16787-3|LAMA3	REV__nc|ENSG00000053747|Q16787-3|LAMA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.2666625976562	2	537.266739	1072.51892	0.81623	0.00043853	-1.0078	-0.00054145	-0.19155	-0.00010292	537.2660704118458	59.178	1.0894	59.147	58.675	59.765	-0.030888					61	30	3	0	0	0	0.81018	1	5542	5542		38.806	3.1879	1	555740	+		36100	16391	23896	23905	41136	41136					-0.014434377990482972
LVVIGALLLL	10	Unmodified	_LVVIGALLLL_					0	0	0		ENST00000546153.1_1_12:10339004-10342736:+|nuORF;nc|ENSG00000165685|Q4KMG9-2|TMEM52B;ENSG00000165685|ENST00000543484|TMEM52B	ENST00000546153.1_1_12:10339004-10342736:+|nuORF	ENST00000546153.1_1_12:10339004-10342736:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.3611450195312	2	512.362453	1022.71035	-0.13841	-7.0915E-05	-2.2699	-0.001163	-2.4083	-0.0012339	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.85108	1	7369	7369		19.36	4.6959	1	293160			36101	6111	23897	23906	41137	41137					0.1999071497003797
LVVIIPHPYSK	11	Unmodified	_LVVIIPHPYSK_					0	0	0		ENSG00000166897|ENST00000402918|ELFN2	ENSG00000166897|ENST00000402918|ELFN2	ENSG00000166897|ENST00000402918|ELFN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.59246826171875	3	422.592058	1264.75434	-1.8214	-0.00076972	3.2668	0.0013805	1.4454	0.00061079	422.5933529014654	49.394	1.9735	49.419	48.567	50.541	0.025574					182	52	4	0	0	0	0.77205	1	3774	3774		17.167	3.6588	1	2033600			36102	6243	23898	23907	41138	41138					0.13255699396358978
LVVIIPLEAL	10	Unmodified	_LVVIIPLEAL_					0	0	0			REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3585815429688	2	540.357368	1078.70018	-0.87065	-0.00047046	3.4074	0.0018412	2.5367	0.0013707	540.3590107608643	36.885	1.6	36.896	36.391	37.991	0.011173					96	35	4	0	0	0	0.85438	1	2443	2443		16.473	0.83134	1	594400	+		36103	23119	23899	23908	41139	41139					0.16398107244799576
LVVLFAVLIK	10	Unmodified	_LVVLFAVLIK_					0	0	0			REV__ENSG00000183607|ENST00000328895|GKN2	REV__ENSG00000183607|ENST00000328895|GKN2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.8854370117188	2	557.883553	1113.75255	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.982	1	26.982	26.482	27.482	0								0	0	0	0.45132	1	1054	1054		11.511	4.3177	1		+		36104	22617	23900	23909	41140	41140					0.20022690378391417
LVVLKVPLQLD	11	Unmodified	_LVVLKVPLQLD_					0	0	0			REV__ENSG00000100154|ENST00000397906|TTC28	REV__ENSG00000100154|ENST00000397906|TTC28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	618.9021606445312	2	618.899931	1235.78531	1.0743	0.00066487	3.558	0.0022021	4.6323	0.0028669	618.9019046745647	88.771	0.90382	89.22	88.996	89.9	0.44893					47	21	3	0	0	0	0.76322	1	10474	10474		19.104	4.2386	1	1744000	+		36105	17144	23901	23910	41141	41141					0.17684852710590349
LVVLLPAELL	10	Unmodified	_LVVLLPAELL_					0	0	0		ENST00000496771.5_1_X:99890559-99890655:-|nuORF	ENST00000496771.5_1_X:99890559-99890655:-|nuORF	ENST00000496771.5_1_X:99890559-99890655:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.35888671875	2	540.357368	1078.70018	-0.87065	-0.00047046	3.4074	0.0018412	2.5367	0.0013707	540.3590107608643	36.885	1.6	36.896	36.391	37.991	0.011173					96	35	4	0	0	0	0.85438	1	2457	2457		16.473	0	1	594400			36106	12793	23902	23911	41142	41142					0.16398107244799576
LVVLLPAELL	10	Unmodified	_LVVLLPAELL_					0	0	0		ENST00000496771.5_1_X:99890559-99890655:-|nuORF	ENST00000496771.5_1_X:99890559-99890655:-|nuORF	ENST00000496771.5_1_X:99890559-99890655:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.358642578125	2	540.357368	1078.70018	0.36275	0.00019602	2.0631	0.0011148	2.4258	0.0013108	540.3583508747528	37.161	1.023	37.647	37.078	38.101	0.48581					60	24	4	0	0	0	0.86452	1	2987	2987		30.504	2.6214	1	627430			36107	12793	23902	23911	41143	41143					0.16398107244799576
LVVLLTGEL	9	Unmodified	_LVVLLTGEL_					0	0	0		ENST00000496458.1_1_2:198262805-198263212:-|nuORF	ENST00000496458.1_1_2:198262805-198263212:-|nuORF	ENST00000496458.1_1_2:198262805-198263212:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8039855957031	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.104	1	39.051	38.551	39.551	-0.052731								0	0	0	0.33676	1	2367	2367		18.324	0	1				36108	12785	23903	23912	41144	41144					0.11580985768239316
LVVMLAELFM	10	Oxidation (M)	_LVVMLAELFM(Oxidation (M))_		LVVMLAELFM(1)		LVVM(-34)LAELFM(34)	0	0	1		ENSG00000076826|ENST00000160298|CAMSAP3;nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3	ENSG00000076826|ENST00000160298|CAMSAP3	ENSG00000076826|ENST00000160298|CAMSAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	591.3197631835938	2	591.319071	1180.62359	0.58505	0.00034595	0.8806	0.00052072	1.4656	0.00086666	591.3198270351554	66.674	0.81735	66.801	66.48	67.297	0.1265					65	36	2	0	0	0	0.67608	1	5961	5961		45.952	10.8	2	190160			36109	1367	23904	23913	41145	41145		24			0.04050224361617438
LVVPDLLHA	9	Unmodified	_LVVPDLLHA_					0	0	0			REV__ENST00000494722.1_1_7:2314657-2354074:-|nuORF	REV__ENST00000494722.1_1_7:2314657-2354074:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.84234619140625	2	488.794935	975.575317	-0.085379	-4.1733E-05	-3.5437	-0.0017321	-3.6291	-0.0017739	488.79324807038466	81.449	0.16561	81.949	81.827	81.993	0.49967					5	3	2	0	0	0	0.20789	1	9422	9422		40.573	4.9543	1	48018	+		36110	27722	23905	23914	41146	41146					0.0865523482827939
LVVPELYETV	10	Unmodified	_LVVPELYETV_					0	0	0			REV__ENST00000506793.5_1_4:44680541-44700695:+|nuORF	REV__ENST00000506793.5_1_4:44680541-44700695:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.3265991210938	2	581.323722	1160.63289	0.54788	0.00031849	0.59721	0.00034717	1.1451	0.00066567	581.323882197196	63.705	0.50563	63.828	63.602	64.107	0.12252					36	20	2	0	0	0	0.85694	1	5609	5609		21.96	0	1	128950	+		36111	20271	23906	23915	41147	41147					0.05900032243152964
LVVPSGMVH	9	Unmodified	_LVVPSGMVH_					0	0	0		ENST00000265440.11_2_7:115670740-115670788:-|nuORF	ENST00000265440.11_2_7:115670740-115670788:-|nuORF	ENST00000265440.11_2_7:115670740-115670788:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.76263427734375	2	469.760038	937.505523	0.18565	8.7212E-05	3.1051	0.0014587	3.2908	0.0015459	469.76127734615494	35.397	1.4141	35.503	35.2	36.614	0.10604					71	45	2	0	0	0	0.76996	1	1895	1895		33.516	5.6333	1	151100			36112	9505	23907	23916	41148	41148					0.03427032888021131
LVVRAVIC	8	Unmodified	_LVVRAVIC_					0	0	0		nc|ENSG00000124091|Q6ZNI0|GCNT7	nc|ENSG00000124091|Q6ZNI0|GCNT7	nc|ENSG00000124091|Q6ZNI0|GCNT7	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7734680175781	2	436.772948	871.531344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.037	1	27.037	26.537	27.537	0								0	0	0	0.29353	1	1060	1060		28.254	7.7724	1				36113	14885	23908	23917	41149	41149					0.09043927130278462
LVVREPPGQDQ	11	Unmodified	_LVVREPPGQDQ_					0	0	0			REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.337646484375	2	619.330402	1236.64625	-0.71212	-0.00044104	4.1319	0.002559	3.4198	0.002118	619.3328577487828	60.41	0.6367	60.41	60.144	60.781	0					65	24	4	0	0	0	0.34641	1	5288	5288		63.534	7.1001	1	426150	+		36114	27846	23909	23918	41150	41150					0.03739283075151434
LVVREPPGQDQ	11	Unmodified	_LVVREPPGQDQ_					0	0	0			REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3324584960938	2	619.330402	1236.64625	0.71947	0.00044559	2.5477	0.0015779	3.2672	0.0020234	619.331937270121	58.256	0.91434	58.809	58.428	59.343	0.55323					67	21	4	0	0	0	0.31387	1	6118	6118		72.879	1.0018	1	3775100	+		36115	27846	23909	23918	41151	41151					0.03739283075151434
LVVREPPGQDQ	11	Unmodified	_LVVREPPGQDQ_					0	0	0			REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	619.330402	1236.64625	-0.31642	-0.00019597	3.5027	0.0021693	3.1862	0.0019733	619.3324445511109	60.496	0.45641	60.483	60.196	60.652	-0.01284	0.11898	-2.2001E-05	NaN	63.534	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78384	+		36116	27846	23909	23918							0.03739283075151434
LVVREPPGQDQ	11	Unmodified	_LVVREPPGQDQ_					0	0	0			REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	619.330402	1236.64625	0.40845	0.00025297	2.7992	0.0017337	3.2077	0.0019866	619.3319480461687	60.355	0.45917	60.323	60.066	60.525	-0.031731	-0.040625	-0.0008933	NaN	63.534	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83886	+		36117	27846	23909	23918							0.03739283075151434
LVVREPPGQDQ	11	Unmodified	_LVVREPPGQDQ_					0	0	0			REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	619.330402	1236.64625	1.1926	0.00073863	1.9084	0.0011819	3.101	0.0019206	619.3315423240327	60.238	0.56844	60.338	60.072	60.64	0.10053	-0.025675	-0.0019967	NaN	63.534	30	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	151150	+		36118	27846	23909	23918							0.03739283075151434
LVVREPPGQDQ	11	Unmodified	_LVVREPPGQDQ_					0	0	0			REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	619.330402	1236.64625	0.55361	0.00034286	2.7098	0.0016783	3.2634	0.0020211	619.3320736378671	60.166	0.5568	60.283	60.029	60.585	0.11676	-0.081479	-0.0010041	NaN	63.534	35	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	148820	+		36119	27846	23909	23918							0.03739283075151434
LVVREPPGQDQ	11	Unmodified	_LVVREPPGQDQ_					0	0	0			REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	619.330402	1236.64625	-0.24559	-0.0001521	3.4865	0.0021593	3.2409	0.0020072	619.3325207921384	60.344	0.51715	60.347	60.15	60.667	0.002758	-0.0173	-4.2016E-05	NaN	63.534	32	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144730	+		36120	27846	23909	23918							0.03739283075151434
LVVRLRRLWPP	11	Unmodified	_LVVRLRRLWPP_					0	0	0			REV__ENST00000308219.13_1_11:1482541-1482889:+|nuORF	REV__ENST00000308219.13_1_11:1482541-1482889:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.9708251953125	3	468.969863	1403.88776	-0.32674	-0.00015323	2.8862	0.0013535	2.5594	0.0012003	468.97108105597175	48.857	1.6348	48.764	48.126	49.761	-0.093178					121	39	4	0	0	0	0.84494	1	3717	3717		6.3209	0.31984	1	745890	+		36121	24862	23910	23919	41152	41152					0.20196983292726145
LVVRPKPLH	9	Unmodified	_LVVRPKPLH_					0	0	0		ENSG00000043039|ENST00000281437|BARX2	ENSG00000043039|ENST00000281437|BARX2	ENSG00000043039|ENST00000281437|BARX2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.8468017578125	2	529.845294	1057.67603	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.868	1	22.859	22.359	23.359	-0.0088215								0	0	0	0.35623	1	695	695		12.959	0	1				36122	940	23911	23920	41153	41153					0.14950311601796784
LVVSWILKGKP	11	Unmodified	_LVVSWILKGKP_					0	0	0		ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.9327087402344	3	413.932303	1238.77508	-1.8356	-0.0007598	2.6354	0.0010909	0.79983	0.00033108	413.93335322974514	43.048	2.0933	43.048	42.061	44.154	0					130	51	3	0	0	0	0.74405	1	3028	3028		23.378	3.3474	1	494810			36123	7859	23912	23921	41154	41154					0.16524289776043588
LVVSWILKGKP	11	Unmodified	_LVVSWILKGKP_					0	0	0		ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.932861328125	3	413.932303	1238.77508	1.6433	0.00068023	-1.0746	-0.0004448	0.56875	0.00023543	413.9318142026393	43.114	2.2589	43.114	42.157	44.416	0.00016785					149	54	3	0	0	0	0.71207	1	3281	3281		29.551	0.97402	1	500010			36124	7859	23912	23921	41155	41155					0.16524289776043588
LVVSWILKGKP	11	Unmodified	_LVVSWILKGKP_					0	0	0		ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9328918457031	3	413.932303	1238.77508	-1.896	-0.00078482	3.0102	0.001246	1.1142	0.0004612	413.93352675822	43.019	1.5308	43.025	42.029	43.559	0.0057487					104	42	4	0	0	0	0.77511	1	2962	2962		16.53	1.1967	1	469080			36125	7859	23912	23921	41156	41156					0.16524289776043588
LVVSWILKGKP	11	Unmodified	_LVVSWILKGKP_					0	0	0		ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.26837158203125	3	413.932303	1238.77508	-1.8879	-0.00078146	3.7075	0.0015346	1.8196	0.00075317	413.9336687105025	47.386	0.85429	47.405	46.864	47.718	0.018967					37	25	2	0	0	0	0.1729	1	3555	3555		8.7993	0	1	122970			36126	7859	23912	23921	41157	41157					0.16524289776043588
LVVVPVPSS	9	Unmodified	_LVVVPVPSS_					0	0	0			REV__ENST00000378332.6_1_16:89358120-89379742:-|nuORF	REV__ENST00000378332.6_1_16:89358120-89379742:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.7778625488281	2	448.776211	895.537869	-1.4107	-0.00063308	4.4433	0.0019941	3.0326	0.001361	448.7781260236316	72.302	1.1681	72.302	71.823	72.992	0					77	49	2	0	0	0	0.78058	1	6499	6499		30.504	10.022	1	136900	+		36127	25894	23913	23922	41158	41158					0.08592143562668753
LVVWLRAS	8	Unmodified	_LVVWLRAS_					0	0	0		ENST00000545396.5_1_12:123463599-123463890:+|nuORF;nc|ENSG00000111325|Q6N063-4|OGFOD2;nc|ENSG00000111325|Q6N063-2|OGFOD2;ENSG00000111325|ENST00000228922|OGFOD2	ENST00000545396.5_1_12:123463599-123463890:+|nuORF	ENST00000545396.5_1_12:123463599-123463890:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28790283203125	2	472.28982	942.565087	-1.7052	-0.00080534	-2.46	-0.0011618	-4.1652	-0.0019672	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.86288	1	12395	12395		26.796	1.3459	1	3080300			36128	2573	23914	23923	41159	41159					0.09150671893701201
LVVYPWTQR	9	Unmodified	_LVVYPWTQR_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.322509765625	2	581.324391	1160.63423	0.19884	0.00011559	-0.010805	-6.2812E-06	0.18804	0.00010931	581.3241550069021	63.873	0.6954	63.839	63.484	64.179	-0.034256					60	21	3	0	0	0	0.51307	3	6056	6049;6056;6064		51.335	4.5846	1	337800		+	36129	8826;620	23915	23924	41160;41161;41162	41161					0.06033711122586283
LVVYPWTQR	9	Unmodified	_LVVYPWTQR_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.3228149414062	2	581.324391	1160.63423	-1.3413	-0.00077973	1.3994	0.00081348	0.058059	3.3751E-05	581.3249113201389	63.782	0.71261	63.809	63.43	64.143	0.027138					57	23	3	0	0	0	0.35373	5	5971	5957;5962;5971;6002;6016		60.972	18.497	1	395880		+	36130	8826;620	23915	23924	41163;41164;41165;41166;41167	41165					0.06033711122586283
LVVYPWTQR	9	Unmodified	_LVVYPWTQR_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	581.3236694335938	2	581.324391	1160.63423	0.63898	0.00037146	-0.73825	-0.00042916	-0.099267	-5.7706E-05	581.3237439732634	63.721	0.46351	63.841	63.628	64.092	0.12004					52	22	3	0	0	0	0.55097	2	5585	5577;5585		49.442	6.2903	1	170020		+	36131	8826;620	23915	23924	41168;41169	41169					0.06033711122586283
LVVYPWTQR	9	Unmodified	_LVVYPWTQR_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.3280639648438	2	581.324391	1160.63423	0.54788	0.00031849	-0.5531	-0.00032153	-0.0052195	-3.0342E-06	581.323882197196	63.705	0.50563	63.828	63.602	64.107	0.12252					36	20	2	0	0	0	0.64922	1	5582	5582		44.117	8.4985	1	128950		+	36132	8826;620	23915	23924	41170	41170					0.06033711122586283
LVVYPWTQR	9	Unmodified	_LVVYPWTQR_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	581.3197631835938	2	581.324391	1160.63423	-0.49301	-0.0002866	0.86683	0.00050391	0.37382	0.00021731	581.3245621009004	63.895	0.60842	63.925	63.588	64.197	0.030247					58	24	3	0	0	0	0.69624	1	5598	5598		40.778	9.2484	1	148510		+	36133	8826;620	23915	23924	41171	41171					0.06033711122586283
LVWAGLSQQIE	11	Unmodified	_LVWAGLSQQIE_					0	0	0			REV__nc|ENSG00000050130|Q9P055-5|JKAMP	REV__nc|ENSG00000050130|Q9P055-5|JKAMP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.336669921875	2	622.337695	1242.66084	-0.27733	-0.0001726	-1.9307	-0.0012016	-2.208	-0.0013741	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.67778	1	12037	12037		35.152	5.982	1	419280	+		36134	29689	23916	23925	41172	41172					0.049213552233140945
LVWAIVVM	8	Unmodified	_LVWAIVVM_					0	0	0		ENSG00000106771|ENST00000374586|TMEM245;nc|ENSG00000106771|Q9H330-4|TMEM245	ENSG00000106771|ENST00000374586|TMEM245	ENSG00000106771|ENST00000374586|TMEM245	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77764892578125	2	465.777699	929.540846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.811	1	79.811	79.311	80.311	0								0	0	0	0.2945	1	7349	7349		33.493	2.9893	1				36135	2316	23917	23926	41173	41173					0.07325695415818245
LVWIYVQIGR	10	Unmodified	_LVWIYVQIGR_					0	0	0			REV__ENSG00000153982|ENST00000284116|GDPD1	REV__ENSG00000153982|ENST00000284116|GDPD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.8707275390625	2	623.868966	1245.72338	0.9237	0.00057627	1.3225	0.00082505	2.2462	0.0014013	623.8696844669474	104.46	2.0179	104.58	104.11	106.13	0.11684					143	50	4	0	0	0	0.85466	1	11168	11168		20.947	0	1	2763900	+		36136	20365	23918	23927	41174	41174					0.1103454608210086
LVWLGQTEE	9	Unmodified	_LVWLGQTEE_					0	0	0			REV__nc|ENSG00000160193|P57081-3|WDR4	REV__nc|ENSG00000160193|P57081-3|WDR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	537.7781372070312	2	537.776939	1073.53933	0.070609	3.7972E-05	1.8665	0.0010038	1.9372	0.0010418	537.7777783354844	43.95	0.88203	43.891	43.6	44.482	-0.058262					36	21	2	0	0	0	0.77244	1	3079	3079		32.812	2.3088	1	173410	+		36137	20699	23919	23928	41175	41175					0.005497328607589225
LVWQNRVAATR	11	Unmodified	_LVWQNRVAATR_					0	0	0			REV__ENST00000524227.5_1_8:41525962-41555361:-|nuORF	REV__ENST00000524227.5_1_8:41525962-41555361:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.58612060546875	3	438.586077	1312.7364	0.076566	3.3581E-05	-1.0803	-0.00047382	-1.0038	-0.00044024	438.5856740395665	31.935	0.78642	31.946	31.626	32.413	0.0109					48	21	3	0	0	0	0.71803	1	1775	1775		28.577	0.93281	1	365660	+		36138	28156	23920	23929	41176	41176					0.0925437719420188
LVYALFLWH	9	Unmodified	_LVYALFLWH_					0	0	0			REV__ENSG00000163377|ENST00000295569|TAFA4	REV__ENSG00000163377|ENST00000295569|TAFA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.3238525390625	2	581.326402	1160.63825	-0.86868	-0.00050499	-2.6102	-0.0015174	-3.4788	-0.0020223	581.3247028868919	63.922	0.69054	63.922	63.65	64.341	-0.00078583					66	24	3	0	0	0	0.72098	1	5964	5964		39.021	1.21	1	377210	+		36139	20906	23921	23930	41177	41177					0.0643580061632747
LVYFVSVILA	10	Unmodified	_LVYFVSVILA_					0	0	0		ENST00000294740.3_1_1:200375972-200376104:-|nuORF	ENST00000294740.3_1_1:200375972-200376104:-|nuORF	ENST00000294740.3_1_1:200375972-200376104:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	562.3427734375	2	562.341718	1122.66888	0.40646	0.00022857	2.9431	0.001655	3.3495	0.0018836	562.3432469329894	90.325	4.336	90.539	89.434	93.77	0.21404					201	103	3	0	0	0	0.86305	1	9026	9026		31.955	2.7848	1	624710			36140	9707	23922	23931	41178	41178					0.11245534210729602
LVYKKLAT	8	Unmodified	_LVYKKLAT_					0	0	0			REV__nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	REV__nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.29876708984375	2	468.299853	934.585153	0.09215	4.3154E-05	-0.34942	-0.00016363	-0.25727	-0.00012048	468.29958952600964	38.514	0.81402	38.486	38.129	38.943	-0.027843					33	18	2	0	0	0	0.9295	1	2608	2608		55.504	18.345	1	152170	+		36141	18736	23923	23932	41179	41179					0.11524422833656445
LVYLQGWGSY	10	Unmodified	_LVYLQGWGSY_					0	0	0		ENST00000249071.10_2_22:37621413-37621920:-|nuORF	ENST00000249071.10_2_22:37621413-37621920:-|nuORF	ENST00000249071.10_2_22:37621413-37621920:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	593.2991333007812	2	593.300581	1184.58661	-0.26542	-0.00015747	-2.9776	-0.0017666	-3.243	-0.0019241	593.298732426466	53.102	0.66135	53.716	53.408	54.069	0.61436					37	15	3	0	0	0	0.37206	1	5366	5366		66.429	4.738	1	1009500			36142	9285	23924	23933	41180	41180					0.0017001213177536556
LVYNGKKLYKS	11	Unmodified	_LVYNGKKLYKS_					0	0	0			REV__ENSG00000077274|ENST00000324068|CAPN6	REV__ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2578125	3	438.258967	1311.75507	-0.33086	-0.000145	-2.5469	-0.0011162	-2.8778	-0.0012612	438.2577888562839	29.898	1.7233	29.855	29.533	31.256	-0.043093					114	42	4	0	0	0	0.67041	1	1586	1586		36.318	10.254	1	610700	+		36143	16743	23925	23934	41181	41181					0.11166494045414765
LVYRNPILQLH	11	Unmodified	_LVYRNPILQLH_					0	0	0			REV__ENST00000514325.1_1_4:83276416-83276518:-|nuORF	REV__ENST00000514325.1_1_4:83276416-83276518:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.3010559082031	3	455.938228	1364.79285	0.80638	0.00036766	1.5947	0.00072709	2.4011	0.0010948	456.27318589011827	32.828	0.25163	33.039	32.851	33.102	0.21168					6	5	2	0	0	0	0.17606	1	2313	2313		9.6461	0	1	23054	+		36144	28009	23926	23935	41182	41182					0.12505005030902794
LVYVSVSTR	9	Unmodified	_LVYVSVSTR_					0	0	0			REV__ENST00000595319.5_1_19:6743021-6743087:+|nuORF	REV__ENST00000595319.5_1_19:6743021-6743087:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.6094970703125	2	512.295299	1022.57605	0.67009	0.00034328	-0.17579	-9.0057E-05	0.4943	0.00025323	512.2953405147576	37.293	0.37564	37.606	37.37	37.746	0.31312					10	8	2	0	0	0	0.20789	1	2979	2979		17.365	8.5426	1	52027	+		36145	29245	23927	23936	41183	41183					0.06566029477346547
LVYWLWEKQKV	11	Unmodified	_LVYWLWEKQKV_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.9520263671875	3	497.950134	1490.82857	0.048788	2.4294E-05	1.7729	0.00088279	1.8216	0.00090709	497.95093715170395	17.785	0.48179	17.302	17.077	17.559	-0.48256					33	10	4	0	0	0	0.76892	1	295	295		17.833	0.6664	1	260050			36146	8813	23928	23937	41184	41184					0.10279042487854895
LWAAMKWSCLS	11	Unmodified	_LWAAMKWSCLS_					0	0	0			REV__ENST00000229405.8_1_6:35254110-35258558:+|nuORF	REV__ENST00000229405.8_1_6:35254110-35258558:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3933715820312	2	648.317394	1294.62024	0.94472	0.00061248	1.8616	0.0012069	2.8063	0.0018194	648.819334166757	107.25	0.1553	107.35	107.26	107.42	0.091255					6	3	2	0	0	0	0.17387	1	11501	11501		37.812	8.6415	1	58173	+		36147	24191	23929	23938	41185	41185					-0.015290256923435663
LWACLVLL	8	Unmodified	_LWACLVLL_					0	0	0			REV__ENSG00000205329|ENST00000641740|OR6C3	REV__ENSG00000205329|ENST00000641740|OR6C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77740478515625	2	465.777699	929.540846	-1.0371	-0.00048307	0.66012	0.00030747	-0.37701	-0.0001756	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.88393	1	7833	7833		33.493	0.68056	1	1384500	+		36148	23552	23930	23939	41186	41186					0.07325695415806877
LWAELGRL	8	Unmodified	_LWAELGRL_					0	0	0			REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|142|3|anti-sense	REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|142|3|anti-sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27740478515625	2	479.279452	956.544351	-0.95082	-0.00045571	-3.0433	-0.0014586	-3.9941	-0.0019143	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.92973	1	10063	10063		50.025	0	1	6350300	+		36149	29432	23931	23940	41187	41187					0.0643408151404401
LWAGLRATLPP	11	Unmodified	_LWAGLRATLPP_					0	0	0		ENSG00000137496|ENST00000393703|IL18BP	ENSG00000137496|ENST00000393703|IL18BP	ENSG00000137496|ENST00000393703|IL18BP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8558959960938	2	597.853316	1193.69208	2.1625	0.0012929	2.6511	0.001585	4.8137	0.0028779	597.8546696490685	92.423	2.9286	92.359	90.439	93.367	-0.06414					206	70	4	0	0	0	0.7144	1	9691	9691		29.17	0	1	2186000			36150	4205	23932	23941	41188	41188					0.10297973048022868
LWAGQVLLRAS	11	Unmodified	_LWAGQVLLRAS_					0	0	0			REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.2413330078125	3	405.239907	1212.69789	-1.7907	-0.00072564	2.6216	0.0010624	0.83096	0.00033674	405.24096272990835	102.91	0.52331	103.09	102.76	103.28	0.18298					21	12	2	0	0	0	0.69071	1	10852	10852		33.039	0.28887	1	865880	+		36151	23572	23933	23942	41189	41189					0.10005071559703538
LWAGQVLLRAS	11	Unmodified	_LWAGQVLLRAS_					0	0	0			REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	405.239907	1212.69789	-0.18599	-7.5369E-05	1.0487	0.00042498	0.86273	0.00034961	405.24022050445825	103.12	0.52499	103.13	102.88	103.4	0.0082016	0.040988	0.00047419	NaN	33.039	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	372860	+		36152	23572	23933	23942							0.10005071559703538
LWAGQVLLRAS	11	Unmodified	_LWAGQVLLRAS_					0	0	0			REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	405.239907	1212.69789	2.717	0.001101	-1.8483	-0.00074901	0.86864	0.00035201	405.2391119886511	103.07	0.53952	103.02	102.74	103.28	-0.047005	-0.066659	-0.0030478	NaN	33.039	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	344210	+		36153	23572	23933	23942							0.10005071559703538
LWAGQVLLRAS	11	Unmodified	_LWAGQVLLRAS_					0	0	0			REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	405.239907	1212.69789	3.1796	0.0012885	-2.2775	-0.00092294	0.90207	0.00036555	405.2388358916841	102.98	0.36319	103.02	102.83	103.2	0.043198	-0.069762	-0.0035696	NaN	33.039	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	389720	+		36154	23572	23933	23942							0.10005071559703538
LWAGQVLLRAS	11	Unmodified	_LWAGQVLLRAS_					0	0	0			REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	405.239907	1212.69789	-1.7907	-0.00072564	2.6216	0.0010624	0.83096	0.00033674	405.24096272990835	102.91	0.52331	103.09	102.76	103.28	0.18298	0.00037324	0.0023864	NaN	33.039	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	865880	+		36155	23572	23933	23942							0.10005071559703538
LWAGQVLLRAS	11	Unmodified	_LWAGQVLLRAS_					0	0	0			REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	405.239907	1212.69789	0.73393	0.00029742	0.27651	0.00011205	1.0104	0.00040947	405.23986473728684	102.98	0.47846	103.11	102.85	103.33	0.12622	0.018619	-0.0004646	NaN	33.039	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	552300	+		36156	23572	23933	23942							0.10005071559703538
LWAGQVLLRAS	11	Unmodified	_LWAGQVLLRAS_					0	0	0			REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	405.239907	1212.69789	-1.9282	-0.00078137	2.4598	0.00099679	0.53159	0.00021542	405.24084918044844	102.95	0.39136	103.06	102.88	103.27	0.11495	-0.029236	0.0021896	NaN	33.039	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	789120	+		36157	23572	23933	23942							0.10005071559703538
LWAGQVLLRAS	11	Unmodified	_LWAGQVLLRAS_					0	0	0			REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	REV__ENST00000521575.1_1_17:4803525-4803825:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	405.239907	1212.69789	2.8329	0.001148	-2.3981	-0.00097181	0.43484	0.00017621	405.23899392980434	102.92	0.46683	103.15	103	103.47	0.22556	0.059481	-0.0037162	NaN	33.039	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1720800	+		36158	23572	23933	23942							0.10005071559703538
LWALCLVL	8	Unmodified	_LWALCLVL_					0	0	0		ENST00000485631.1_1_22:18189556-18209569:+|nuORF	ENST00000485631.1_1_22:18189556-18209569:+|nuORF	ENST00000485631.1_1_22:18189556-18209569:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.777587890625	2	465.777699	929.540846	0.52254	0.00024339	-0.83161	-0.00038735	-0.30907	-0.00014396	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.88393	1	8409	8409		33.493	0.68056	1	1330400			36159	12562	23934	23943	41190	41190					0.07325695415806877
LWALIPLRRQ	10	Unmodified	_LWALIPLRRQ_					0	0	0			REV__ENSG00000181045|ENST00000361193|SLC26A11	REV__ENSG00000181045|ENST00000361193|SLC26A11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.368896484375	2	633.395682	1264.77681	-0.15138	-9.5882E-05	2.2532	0.0014271	2.1018	0.0013313	633.3964671133941	98.124	0.21929	98.181	98.051	98.27	0.056831					6	4	2	0	0	0	0.37624	1	10354	10354		24.203	0	1	74717	+		36160	22438	23935	23944	41191	41191					0.15501343584651295
LWALPLLAVLL	11	Unmodified	_LWALPLLAVLL_					0	0	0			REV__ENSG00000113262|ENST00000517717|GRM6	REV__ENSG00000113262|ENST00000517717|GRM6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3556518554688	2	611.40211	1220.78967	2.3818	0.0014562	-0.13702	-8.3775E-05	2.2448	0.0013724	611.4033172008533	95.973	0.34581	95.915	95.677	96.023	-0.057526					11	7	2	0	0	0	0.17277	1	10288	10288		24.203	5.9407	1	43043	+		36161	17986	23936	23945	41192	41192					0.18810361924192875
LWALWLLLAL	10	Unmodified	_LWALWLLLAL_					0	0	0		nc|ENSG00000147852|P98155-2|VLDLR;ENSG00000147852|ENST00000382100|VLDLR	nc|ENSG00000147852|P98155-2|VLDLR	nc|ENSG00000147852|P98155-2|VLDLR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.922607421875	3	404.589877	1210.7478	-1.9009	-0.00076907	-0.73813	-0.00029864	-2.639	-0.0010677	404.9239578033223	40.904	1.2809	40.908	40.545	41.826	0.0043983					58	43	2	0	0	0	0.86348	1	2617	2617		31.53	11.215	1	259010			36162	4924	23937	23946	41193	41193					0.1508580623567468
LWAMLIIV	8	Oxidation (M)	_LWAM(Oxidation (M))LIIV_		LWAM(1)LIIV		LWAM(44)LIIV	0	0	1		ENST00000600970.5_1_19:17327144-17330619:+|nuORF;ENSG00000053501|ENST00000263897|USE1	ENST00000600970.5_1_19:17327144-17330619:+|nuORF	ENST00000600970.5_1_19:17327144-17330619:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7906494140625	2	487.790807	973.56706	-0.24073	-0.00011743	-0.030285	-1.4773E-05	-0.27102	-0.0001322	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.91333	1	9798	9798		43.626	10.11	1	1981400			36163	1008	23938	23947	41194	41194		15			0.07921964587308139
LWAQKKHKIYL	11	Unmodified	_LWAQKKHKIYL_					0	0	0		ENSG00000205678|ENST00000381210|TECRL	ENSG00000205678|ENST00000381210|TECRL	ENSG00000205678|ENST00000381210|TECRL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6235046386719	3	476.62224	1426.84489	2.8112	0.0013399	0.24063	0.00011469	3.0518	0.0014546	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.7896	1	13265	13265		13.508	2.4112	1	2689700			36164	8536	23939	23948	41195	41195					0.1485416844466272
LWARLLAAGY	10	Unmodified	_LWARLLAAGY_					0	0	0			REV__nc|ENSG00000140691|Q96C12-3|ARMC5	REV__nc|ENSG00000140691|Q96C12-3|ARMC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3296508789062	2	567.326934	1132.63931	1.5887	0.00090129	3.6924	0.0020948	5.2811	0.0029961	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.86452	1	9484	9484		30.504	5.0535	1	5459400	+		36165	19638	23940	23949	41196	41196					0.07830014985211164
LWARLLAAGY	10	Unmodified	_LWARLLAAGY_					0	0	0			REV__nc|ENSG00000140691|Q96C12-3|ARMC5	REV__nc|ENSG00000140691|Q96C12-3|ARMC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.329833984375	2	567.326934	1132.63931	0.79571	0.00045143	4.1414	0.0023495	4.9371	0.0028009	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.86452	1	9499	9499		30.504	4.9296	1	18145000	+		36166	19638	23940	23949	41197	41197					0.07830014985211164
LWARLLAD	8	Unmodified	_LWARLLAD_					0	0	0		ENST00000265801.6_2_8:20104216-20104552:-|nuORF	ENST00000265801.6_2_8:20104216-20104552:-|nuORF	ENST00000265801.6_2_8:20104216-20104552:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27728271484375	2	479.279452	956.544351	-0.95082	-0.00045571	-3.0433	-0.0014586	-3.9941	-0.0019143	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.884	1	9988	9988		33.516	3.1979	1	6350300			36167	9515	23941	23950	41198	41198					0.06434081514032641
LWASRTRR	8	Unmodified	_LWASRTRR_					0	0	0			REV__nc|ENSG00000087494|P12272-2|PTHLH	REV__nc|ENSG00000087494|P12272-2|PTHLH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3033447265625	2	523.304324	1044.5941	-0.83281	-0.00043582	-0.64754	-0.00033886	-1.4803	-0.00077467	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.89494	1	8322	8322		37.159	0	1	2778600	+		36168	16935	23942	23951	41199	41199					0.0735820924271593
LWASRTRR	8	Unmodified	_LWASRTRR_					0	0	0			REV__nc|ENSG00000087494|P12272-2|PTHLH	REV__nc|ENSG00000087494|P12272-2|PTHLH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3031616210938	2	523.304324	1044.5941	-0.50611	-0.00026485	-0.99148	-0.00051884	-1.4976	-0.00078369	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.90983	1	10121	10121		42.396	1.618	1	3970100	+		36169	16935	23942	23951	41200	41200					0.0735820924271593
LWAVARTP	8	Unmodified	_LWAVARTP_					0	0	0			REV__ENST00000371834.6_3_9:136918617-136933635:-|nuORF	REV__ENST00000371834.6_3_9:136918617-136933635:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2641296386719	2	457.266345	912.518136	-1.1625	-0.00053158	-3.3651	-0.0015388	-4.5277	-0.0020703	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.91005	1	7920	7920		42.474	0	1	4732500	+		36170	25700	23943	23952	41201	41201					0.05837812342565485
LWDPLSLLRGL	11	Unmodified	_LWDPLSLLRGL_					0	0	0		ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.882080078125	2	641.87953	1281.74451	2.2004	0.0014124	2.3254	0.0014926	4.5258	0.002905	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.7144	1	10561	10561		29.17	1.2878	1	3624200			36171	5233	23944	23953	41202	41202					0.11490511390979918
LWDPLSLLRGL	11	Unmodified	_LWDPLSLLRGL_					0	0	0		ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8821411132812	2	641.87953	1281.74451	1.5974	0.0010254	2.9074	0.0018662	4.5048	0.0028915	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.66929	1	10066	10066		36.447	7.2767	1	4266200			36172	5233	23944	23953	41203	41203					0.11490511390979918
LWDPLSLLRGL	11	Unmodified	_LWDPLSLLRGL_					0	0	0		ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.882080078125	2	641.87953	1281.74451	0.91411	0.00058675	3.6201	0.0023236	4.5342	0.0029104	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.48529	1	10112	10112		52.937	10.541	1	4136300			36173	5233	23944	23953	41204	41204					0.11490511390979918
LWEFFLKQWVK	11	Unmodified	_LWEFFLKQWVK_					0	0	0			REV__ENST00000445427.1_1_10:6626067-6626238:+|nuORF	REV__ENST00000445427.1_1_10:6626067-6626238:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.6204528808594	3	508.618495	1522.83366	-1.6149	-0.00082136	3.0851	0.0015691	1.4702	0.00074777	508.6201062659435	38.438	0.50572	38.438	38.225	38.73	0					22	12	2	0	0	0	0.7896	1	2375	2375		13.508	0.55046	1	83150	+		36174	26795	23945	23954	41205	41205					0.09315346350490472
LWELEWRSWKV	11	Unmodified	_LWELEWRSWKV_					0	0	0		ENST00000266483.6_1_12:34175520-34175571:+|nuORF	ENST00000266483.6_1_12:34175520-34175571:+|nuORF	ENST00000266483.6_1_12:34175520-34175571:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.6094970703125	3	511.273388	1530.79833	0.65681	0.00033581	2.8536	0.001459	3.5104	0.0017948	511.27480455752027	37.156	0.65799	37.469	37.206	37.864	0.31312					49	15	5	0	0	0	0.76579	1	2979	2979		18.531	0.69791	1	1705000			36175	9522	23946	23955	41206	41206					0.05416683822681989
LWELEWRSWKV	11	Unmodified	_LWELEWRSWKV_					0	0	0		ENST00000266483.6_1_12:34175520-34175571:+|nuORF	ENST00000266483.6_1_12:34175520-34175571:+|nuORF	ENST00000266483.6_1_12:34175520-34175571:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.609619140625	3	511.273388	1530.79833	1.3628	0.00069676	2.1443	0.0010963	3.5071	0.0017931	511.27443320480126	37.027	0.70287	37.513	37.283	37.986	0.48581					49	16	4	0	0	0	0.76251	1	2966	2966		19.263	3.342	1	1640500			36176	9522	23946	23955	41207	41207					0.05416683822681989
LWFVSRGPG	9	Unmodified	_LWFVSRGPG_					0	0	0		ENST00000522562.5_1_5:71523001-71533927:-|nuORF	ENST00000522562.5_1_5:71523001-71533927:-|nuORF	ENST00000522562.5_1_5:71523001-71533927:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.7728271484375	2	509.777077	1017.5396	-1.7143	-0.0008739	-3.3954	-0.0017309	-5.1096	-0.0026048	509.77528861020255	36.905	0.62648	36.916	36.704	37.33	0.011173					20	13	2	0	0	0	0.09311	1	2434	2434		94.006	29.799	1	127780			36177	13188	23947	23956	41208	41208					0.03153197371295846
LWFVSRGPG	9	Unmodified	_LWFVSRGPG_					0	0	0		ENST00000522562.5_1_5:71523001-71533927:-|nuORF	ENST00000522562.5_1_5:71523001-71533927:-|nuORF	ENST00000522562.5_1_5:71523001-71533927:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	509.777077	1017.5396	0.64192	0.00032724	-5.1861	-0.0026437	-4.5441	-0.0023165	509.77435748615534	36.321	0.95076	36.602	36.429	37.38	0.28173	-0.23744	-0.00012065	NaN	94.006	40	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	274590			36178	13188	23947	23956							0.03153197371295846
LWFVSRGPG	9	Unmodified	_LWFVSRGPG_					0	0	0		ENST00000522562.5_1_5:71523001-71533927:-|nuORF	ENST00000522562.5_1_5:71523001-71533927:-|nuORF	ENST00000522562.5_1_5:71523001-71533927:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	509.777077	1017.5396	2.1085	0.0010749	-6.629	-0.0033793	-4.5205	-0.0023044	509.7734492845356	36.225	1.0379	36.665	36.451	37.489	0.44043	-0.17448	-0.0015918	NaN	94.006	37	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	321080			36179	13188	23947	23956							0.03153197371295846
LWGGAPRL	8	Unmodified	_LWGGAPRL_					0	0	0			REV__ENST00000448342.5_1_7:100450372-100456466:+|nuORF	REV__ENST00000448342.5_1_7:100450372-100456466:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7538146972656	2	435.253237	868.491922	0.060967	2.6536E-05	-1.9562	-0.00085144	-1.8952	-0.0008249	435.2512504176026	77.105	2.0148	77.505	76.162	78.177	0.3997					95	54	4	0	0	0	0.87807	1	8766	8766		31.579	1.7373	1	572660	+		36180	26837	23948	23957	41209	41209					0.0524154317108696
LWGKLDIS	8	Unmodified	_LWGKLDIS_					0	0	0			REV__ENSG00000147465|ENST00000276449|STAR	REV__ENSG00000147465|ENST00000276449|STAR	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2668151855469	2	466.26601	930.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.708	1	36.719	36.219	37.219	0.011173								0	0	0	0.30457	1	2398	2398		50.025	0.58299	1		+		36181	20073	23949	23958	41210	41210					0.049429729028588554
LWGQLLHK	8	Unmodified	_LWGQLLHK_					0	0	0			REV__ENSG00000109805|ENST00000251496|NCAPG	REV__ENSG00000109805|ENST00000251496|NCAPG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.79534912109375	2	497.795269	993.575986	0.33469	0.00016661	1.0393	0.00051735	1.374	0.00068396	497.79551634358694	49.085	0.97178	49.123	48.706	49.678	0.037735					52	22	3	0	0	0	0.87922	1	3803	3803		31.955	2.1133	1	383630	+		36182	17775	23950	23959	41211	41211					0.07894074267983342
LWHGVCLCE	9	Unmodified	_LWHGVCLCE_					0	0	0			REV__ENST00000432673.1_1_6:139013691-139017806:+|nuORF	REV__ENST00000432673.1_1_6:139013691-139017806:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2430419921875	2	530.241155	1058.46776	-0.14444	-7.6588E-05	2.5444	0.0013491	2.3999	0.0012725	530.2422664098204	33.992	0.67593	33.995	33.706	34.382	0.0026016					33	14	3	0	0	0	0.69914	1	2022	2022		40.573	12.318	1	176270	+		36183	26635	23951	23960	41212	41212					-0.0591380136911539
LWHILLGLSGV	11	Unmodified	_LWHILLGLSGV_					0	0	0		nc|ENSG00000163581|P11168-2|SLC2A2;ENSG00000163581|ENST00000314251|SLC2A2	nc|ENSG00000163581|P11168-2|SLC2A2	nc|ENSG00000163581|P11168-2|SLC2A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.2469482421875	3	403.24477	1206.71248	3.4575	0.0013942	2.374	0.00095732	5.8315	0.0023515	403.245812263779	104.32	2.7467	104.55	103.67	106.42	0.2268					126	71	3	0	0	0	0.75906	1	12735	12735		20.03	6.5225	1	736130			36184	5830	23952	23961	41213	41213					0.11739143707836774
LWIEFLPE	8	Unmodified	_LWIEFLPE_					0	0	0		ENST00000396893.6_1_19:37155631-37157654:-|nuORF	ENST00000396893.6_1_19:37155631-37157654:-|nuORF	ENST00000396893.6_1_19:37155631-37157654:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3035278320312	2	523.781493	1045.54843	1.2357	0.00064723	2.2147	0.00116	3.4504	0.0018072	523.7826366597782	90.382	2.9762	90.428	89.179	92.155	0.04644					112	70	3	0	0	0	0.4196	1	9511	9511		19.36	0	1	147620			36185	11124	23953	23962	41214	41214					0.027481262170795162
LWIILVCA	8	Unmodified	_LWIILVCA_					0	0	0		nc|ENSG00000148942|Q1EHB4-2|SLC5A12;ENSG00000148942|ENST00000396005|SLC5A12	nc|ENSG00000148942|Q1EHB4-2|SLC5A12	nc|ENSG00000148942|Q1EHB4-2|SLC5A12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77703857421875	2	465.777699	929.540846	-1.2002	-0.00055902	0.93559	0.00043578	-0.26459	-0.00012324	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.84567	1	7643	7643		24.504	0	1	683640			36186	4990	23954	23963	41215	41215					0.07325695415818245
LWILGLCL	8	Unmodified	_LWILGLCL_					0	0	0		nc|ENSG00000173401|Q6UWM5-2|GLIPR1L1;ENSG00000173401|ENST00000378695|GLIPR1L1	nc|ENSG00000173401|Q6UWM5-2|GLIPR1L1	nc|ENSG00000173401|Q6UWM5-2|GLIPR1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7773132324219	2	465.777699	929.540846	0.60386	0.00028126	-0.94803	-0.00044157	-0.34417	-0.00016031	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.88393	1	7702	7702		33.493	1.5381	1	1082300			36187	6855	23955	23964	41216	41216					0.07325695415806877
LWIPRSLVLV	10	Unmodified	_LWIPRSLVLV_					0	0	0		ENSG00000163959|ENST00000296327|SLC51A	ENSG00000163959|ENST00000296327|SLC51A	ENSG00000163959|ENST00000296327|SLC51A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.381591796875	2	598.381709	1194.74886	-1.1086	-0.00066337	0.8554	0.00051186	-0.2532	-0.00015151	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.85251	1	2759	2759		19.997	3.99	1	352020			36188	5894	23956	23965	41217	41217					0.15928020604542326
LWKDLRAS	8	Unmodified	_LWKDLRAS_					0	0	0		ENST00000556399.5_1_14:21542583-21542628:+|nuORF	ENST00000556399.5_1_14:21542583-21542628:+|nuORF	ENST00000556399.5_1_14:21542583-21542628:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7814025878906	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.87479	1	8141	8141		30.504	5.9996	1	385180			36189	13742	23957	23966	41218	41218					0.05589180025708629
LWKDLRAS	8	Unmodified	_LWKDLRAS_					0	0	0		ENST00000556399.5_1_14:21542583-21542628:+|nuORF	ENST00000556399.5_1_14:21542583-21542628:+|nuORF	ENST00000556399.5_1_14:21542583-21542628:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.78033447265625	2	494.782359	987.550165	-0.85772	-0.00042438	-3.1278	-0.0015476	-3.9855	-0.001972	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.8347	1	8673	8673		23.042	0.46283	1	737700			36190	13742	23957	23966	41219	41219					0.05589180025708629
LWKMGFFRRRY	11	Unmodified	_LWKMGFFRRRY_					0	0	0		ENSG00000144668|ENST00000264741|ITGA9	ENSG00000144668|ENST00000264741|ITGA9	ENSG00000144668|ENST00000264741|ITGA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.953125	3	520.618724	1558.83434	-0.51806	-0.00026971	1.5361	0.0007997	1.018	0.00052999	520.6194194539634	59.669	0.73926	60.222	59.881	60.621	0.55323					40	18	3	0	0	0	0.78683	1	6317	6317		14.086	4.8742	1	794050			36191	4725	23958	23967	41220	41220					0.07727862518572692
LWKMGFFRRRY	11	Unmodified	_LWKMGFFRRRY_					0	0	0		ENSG00000144668|ENST00000264741|ITGA9	ENSG00000144668|ENST00000264741|ITGA9	ENSG00000144668|ENST00000264741|ITGA9	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	520.618724	1558.83434	-0.39044	-0.00020327	1.5354	0.00079936	1.145	0.00059608	520.6194677908371	59.801	0.56499	60.192	59.808	60.373	0.39077	-0.015255	-5.4675E-07	NaN	14.086	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	524540			36192	4725	23958	23967							0.07727862518572692
LWKPKGLAIAL	11	Unmodified	_LWKPKGLAIAL_					0	0	0		ENSG00000100652|ENST00000216540|SLC10A1	ENSG00000100652|ENST00000216540|SLC10A1	ENSG00000100652|ENST00000216540|SLC10A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9299621582031	3	403.928781	1208.76451	0.032409	1.3091E-05	2.1418	0.00086513	2.1742	0.00087822	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.78683	1	3896	3896		14.086	7.7651	1	2636600			36193	1858	23959	23968	41221	41221					0.1684830712160874
LWKQAPQG	8	Unmodified	_LWKQAPQG_					0	0	0			REV__nc|ENSG00000178773|Q9UBL6|CPNE7	REV__nc|ENSG00000178773|Q9UBL6|CPNE7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2536926269531	2	464.255977	926.497401	-1.597	-0.00074142	-2.6107	-0.001212	-4.2077	-0.0019534	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.91005	1	8026	8026		42.474	3.2216	1	1324500	+		36194	30060	23960	23969	41222	41222					0.031212219629082938
LWKQVDGGH	9	Unmodified	_LWKQVDGGH_					0	0	0			REV__ENSG00000100385|ENST00000216223|IL2RB	REV__ENSG00000100385|ENST00000216223|IL2RB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8206787109375	2	520.269616	1038.52468	0.14094	7.3326E-05	1.3325	0.00069325	1.4734	0.00076657	520.2703493597272	84.577	0.40493	85.014	84.821	85.226	0.43658					15	9	3	0	0	0	0.19701	1	9824	9824		76.774	0	1	109610	+		36195	17186	23961	23970	41223	41223					0.006957055032899007
LWLASRRFMRR	11	Unmodified	_LWLASRRFMRR_					0	0	0		ENST00000391975.5_1_2:242194961-242195633:-|nuORF	ENST00000391975.5_1_2:242194961-242195633:-|nuORF	ENST00000391975.5_1_2:242194961-242195633:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.9518127441406	3	497.954107	1490.84049	-1.8811	-0.00093669	-4.0579	-0.0020207	-5.939	-0.0029573	497.95200362159926	24.056	0.79183	24.056	23.674	24.466	0					97	33	4	0	0	0	0.75779	1	782	782		20.315	1.0523	1	192870			36196	11004	23962	23971	41224	41224					0.11470380750051845
LWLCCPALGI	10	Unmodified	_LWLCCPALGI_					0	0	0			REV__nc|ENSG00000078808|Q9BRK5-4|SDF4	REV__nc|ENSG00000078808|Q9BRK5-4|SDF4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3161010742188	2	544.785198	1087.55584	-1.2057	-0.00065687	2.5925	0.0014124	1.3868	0.0007555	544.7865042614974	87.592	1.3762	88.055	87.811	89.188	0.46312					47	33	2	0	0	0	0.37624	1	10326	10326		44.531	2.193	1	670780	+		36197	16772	23963	23972	41225	41225					0.015568192215141607
LWLGRLFGV	9	Unmodified	_LWLGRLFGV_					0	0	0		nc|ENSG00000160753|Q9BVN2-4|RUSC1;ENSG00000160753|ENST00000368352|RUSC1;nc|ENSG00000160753|Q9BVN2-2|RUSC1;nc|ENSG00000160753|Q9BVN2-3|RUSC1	nc|ENSG00000160753|Q9BVN2-4|RUSC1	nc|ENSG00000160753|Q9BVN2-4|RUSC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.81689453125	2	530.818744	1059.62294	-0.064413	-3.4192E-05	3.9874	0.0021166	3.923	0.0020824	530.8208011339311	88.661	1.1814	88.868	88.549	89.73	0.20731					43	27	2	0	0	0	0.20789	1	8830	8830		26.796	8.4717	1	1078600			36198	5603	23964	23973	41226	41226					0.09550933819127749
LWLKLTRLRCV	11	Unmodified	_LWLKLTRLRCV_					0	0	0			REV__nc|ENSG00000142405|P59046-3|NLRP12	REV__nc|ENSG00000142405|P59046-3|NLRP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.623779296875	3	467.623475	1399.8486	4.2236	0.0019751	-3.6813	-0.0017215	0.54232	0.0002536	467.6216642662339	107.33	0.62836	107.48	107.24	107.87	0.14561					64	26	4	0	0	0	0.78391	1	13131	13131		14.694	1.7362	1	481390	+		36199	29899	23965	23974	41227	41227					0.16466514946819188
LWLLCLVA	8	Unmodified	_LWLLCLVA_					0	0	0		ENSG00000158966|ENST00000651257|CACHD1	ENSG00000158966|ENST00000651257|CACHD1	ENSG00000158966|ENST00000651257|CACHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7776184082031	2	465.777699	929.540846	0.60386	0.00028126	-0.94803	-0.00044157	-0.34417	-0.00016031	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.84567	1	7793	7793		24.504	0.30126	1	1082300			36200	5505	23966	23975	41228	41228					0.07325695415806877
LWLLLAVC	8	Unmodified	_LWLLLAVC_					0	0	0			REV__ENSG00000185156|ENST00000329805|MFSD6L	REV__ENSG00000185156|ENST00000329805|MFSD6L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7773132324219	2	465.777699	929.540846	-1.2002	-0.00055902	0.93559	0.00043578	-0.26459	-0.00012324	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.91333	1	7612	7612		43.626	10.133	1	683640	+		36201	22741	23967	23976	41229	41229					0.07325695415818245
LWLLLAVC	8	Unmodified	_LWLLLAVC_					0	0	0			REV__ENSG00000185156|ENST00000329805|MFSD6L	REV__ENSG00000185156|ENST00000329805|MFSD6L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.77752685546875	2	465.777699	929.540846	-0.11871	-5.5291E-05	-0.15438	-7.1906E-05	-0.27308	-0.0001272	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.88393	1	8069	8069		33.493	8.989	1	1083800	+		36202	22741	23967	23976	41230	41230					0.07325695415818245
LWLLLAVC	8	Unmodified	_LWLLLAVC_					0	0	0			REV__ENSG00000185156|ENST00000329805|MFSD6L	REV__ENSG00000185156|ENST00000329805|MFSD6L	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7775573730469	2	465.777699	929.540846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.761	1	79.705	79.205	80.205	-0.056503								0	0	0	0.29725	1	7994	7994		24.504	0	1		+		36203	22741	23967	23976	41231	41231					0.07325695415818245
LWLLLAVC	8	Unmodified	_LWLLLAVC_					0	0	0			REV__ENSG00000185156|ENST00000329805|MFSD6L	REV__ENSG00000185156|ENST00000329805|MFSD6L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77752685546875	2	465.777699	929.540846	0.60386	0.00028126	-0.94803	-0.00044157	-0.34417	-0.00016031	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.84567	1	7969	7969		24.504	0	1	1082300	+		36204	22741	23967	23976	41232	41232					0.07325695415818245
LWLVRRAYT	9	Unmodified	_LWLVRRAYT_					0	0	0			REV__ENST00000527238.5_1_11:125109600-125201729:+|nuORF	REV__ENST00000527238.5_1_11:125109600-125201729:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3428344726562	2	589.345658	1176.67676	-0.40075	-0.00023618	-4.2062	-0.0024789	-4.607	-0.0027151	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.78058	1	9109	9109		30.504	0.18592	1	4112500	+		36205	28226	23968	23977	41233	41233					0.09549106250847217
LWLVTNVQGVL	11	Unmodified	_LWLVTNVQGVL_					0	0	0		ENST00000492211.5_1_10:98984592-98984766:-|nuORF	ENST00000492211.5_1_10:98984592-98984766:-|nuORF	ENST00000492211.5_1_10:98984592-98984766:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.57818603515625	3	414.579929	1240.71796	0.036477	1.5123E-05	-2.4816	-0.0010288	-2.4452	-0.0010137	414.578591354776	28.115	0.58867	28.018	27.752	28.34	-0.096945					31	13	3	0	0	0	0.70584	1	1677	1677		30.569	1.0181	1	255430			36206	12700	23969	23978	41234	41234					0.10722822499656104
LWMATLPIKLP	11	Unmodified	_LWMATLPIKLP_					0	0	0		nc|ENSG00000177595|Q9HB75-5|PIDD1;ENST00000534525.5_1_11:799959-803120:-|nuORF;nc|ENSG00000177595|Q9HB75-6|PIDD1;ENST00000527357.5_1_11:799959-801918:-|nuORF;nc|ENSG00000177595|Q9HB75-4|PIDD1;ENST00000524486.5_1_11:799309-803120:-|nuORF;nc|ENSG00000177595|Q9HB75-3|PIDD1;nc|ENSG00000177595|Q9HB75-2|PIDD1;ENSG00000177595|ENST00000347755|PIDD1	nc|ENSG00000177595|Q9HB75-5|PIDD1	nc|ENSG00000177595|Q9HB75-5|PIDD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8823852539062	2	641.883227	1281.7519	2.2004	0.0014124	-3.4339	-0.0022041	-1.2335	-0.00079176	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.67778	1	10513	10513		35.152	4.8343	1	3624200			36207	13409	23970	23979	41235	41235					0.12229527667068396
LWMKFIIENLF	11	Unmodified	_LWMKFIIENLF_					0	0	0		ENST00000278616.8_1_11:108151731-108151785:+|nuORF	ENST00000278616.8_1_11:108151731-108151785:+|nuORF	ENST00000278616.8_1_11:108151731-108151785:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.3064270019531	3	485.268586	1452.78393	-0.50665	-0.00024586	0.58163	0.00028225	0.074981	3.6386E-05	485.60242141753815	53.62	0.62841	54.205	53.872	54.501	0.58474					26	14	3	0	0	0	0.17911	1	5408	5408		18.531	7.9443	1	117790			36208	9611	23971	23980	41236	41236					0.07564895350242296
LWMSLLLV	8	Unmodified	_LWMSLLLV_					0	0	0		ENST00000372577.2_1_9:131745594-131745630:+|nuORF	ENST00000372577.2_1_9:131745594-131745630:+|nuORF	ENST00000372577.2_1_9:131745594-131745630:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79058837890625	2	487.790807	973.56706	-1.3135	-0.00064074	0.91911	0.00044833	-0.39444	-0.0001924	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.89457	1	8372	8372		37.028	3.5355	1	2239000			36209	10706	23972	23981	41237	41237					0.07921964587319508
LWMSLLLV	8	Unmodified	_LWMSLLLV_					0	0	0		ENST00000372577.2_1_9:131745594-131745630:+|nuORF	ENST00000372577.2_1_9:131745594-131745630:+|nuORF	ENST00000372577.2_1_9:131745594-131745630:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7906494140625	2	487.790807	973.56706	-0.70733	-0.00034503	0.27543	0.00013435	-0.4319	-0.00021068	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.88915	2	8070	8070;8177		37.028	3.5355	1	2348200			36210	10706	23972	23981	41238;41239	41238					0.07921964587319508
LWMVSKMII	9	Unmodified	_LWMVSKMII_					0	0	0		ENST00000472143.2_1_13:79951480-79979915:-|nuORF	ENST00000472143.2_1_13:79951480-79979915:-|nuORF	ENST00000472143.2_1_13:79951480-79979915:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8201293945312	2	560.816499	1119.61844	2.0312	0.0011391	3.8823	0.0021773	5.9135	0.0033164	560.8185510503406	92.547	2.8653	92.482	91.358	94.223	-0.06414					202	67	4	0	0	0	0.76255	1	9830	9830		35.618	5.1146	1	788180			36211	12256	23973	23982	41240	41240					0.06341965289698237
LWNRPKTLAL	10	Unmodified	_LWNRPKTLAL_					0	0	0		ENST00000265245.9_1_3:194362700-194362778:-|nuORF	ENST00000265245.9_1_3:194362700-194362778:-|nuORF	ENST00000265245.9_1_3:194362700-194362778:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3696899414062	2	606.36659	1210.71863	2.2948	0.0013915	2.4855	0.0015071	4.7803	0.0028986	606.3679986963975	94.415	3.2479	94.356	93.249	96.497	-0.059212					198	76	3	0	0	0	0.86348	1	10003	10003		31.53	0	1	800340			36212	9500	23974	23983	41241	41241					0.12169661939378784
LWPAAILLYT	10	Unmodified	_LWPAAILLYT_					0	0	0			REV__ENSG00000198049|ENST00000367126|AVPR1B	REV__ENSG00000198049|ENST00000367126|AVPR1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.8406372070312	2	580.839342	1159.66413	-0.70799	-0.00041123	2.7657	0.0016064	2.0577	0.0011952	580.8407660860938	69.805	0.83526	69.876	69.594	70.43	0.071045					106	41	3	0	0	0	0.86718	1	6302	6302		27.882	3.3631	1	12587000	+		36213	23293	23975	23984	41242	41242					0.09068650067933959
LWPALRGG	8	Unmodified	_LWPALRGG_					0	0	0		ENST00000483133.1_7:100608813-100609843:+|nuORF	ENST00000483133.1_7:100608813-100609843:+|nuORF	ENST00000483133.1_7:100608813-100609843:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25201416015625	2	435.253237	868.491922	-1.5314	-0.00066653	-2.8716	-0.0012499	-4.4029	-0.0019164	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87807	1	7347	7347		31.579	1.0753	1	2494100			36214	12504	23976	23985	41243	41243					0.052415431710983285
LWPKIRVPL	9	Unmodified	_LWPKIRVPL_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.3641967773438	2	561.363319	1120.71209	-0.90534	-0.00050823	1.7899	0.0010048	0.88454	0.00049655	561.3641911256115	45.987	0.8561	45.968	45.577	46.433	-0.018581					49	20	3	0	0	0	0.7932	1	3669	3669		12.207	0	1	139730			36215	5109	23977	23986	41244	41244					0.1565576877865169
LWPKLDQDILI	11	Unmodified	_LWPKLDQDILI_					0	0	0			REV__ENSG00000131044|ENST00000535842|TTLL9	REV__ENSG00000131044|ENST00000535842|TTLL9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.9329528808594	3	451.930739	1352.77039	2.1819	0.00098608	2.1467	0.00097016	4.3286	0.0019562	451.9316131706083	100.36	1.9025	100.71	99.62	101.52	0.3459					138	47	4	0	0	0	0.72374	1	12213	12213		27.644	0.89421	1	885260	+		36216	18932	23978	23987	41245	41245					0.10811360842626527
LWPMWRSSA	9	Unmodified	_LWPMWRSSA_					0	0	0		ENST00000609887.1_1_X:46404949-46406924:+|nuORF	ENST00000609887.1_1_X:46404949-46406924:+|nuORF	ENST00000609887.1_1_X:46404949-46406924:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.330078125	2	567.281669	1132.54878	-1.396	-0.00079193	-1.9775	-0.0011218	-3.3735	-0.0019137	567.2811753219614	92.297	0.33969	92.483	92.259	92.599	0.18582					10	7	2	0	0	0	0.20789	1	9297	9297		37.159	17.162	1	40438			36217	14491	23979	23988	41246	41246					-0.012187773347022812
LWPPPLPQAQ	10	Unmodified	_LWPPPLPQAQ_					0	0	0			REV__ENST00000334801.7_1_11:118767651-118767771:-|nuORF	REV__ENST00000334801.7_1_11:118767651-118767771:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	573.8163452148438	2	573.818941	1145.62333	-1.3052	-0.00074896	-2.089	-0.0011987	-3.3942	-0.0019477	573.817608790497	36.135	0.93153	36.135	35.803	36.734	0					60	22	4	0	0	0	0.777	1	2104	2104		40.573	1.3198	1	769810	+		36218	25161	23980	23989	41247	41247					0.05634308748312833
LWPPRTLLRS	10	Unmodified	_LWPPRTLLRS_					0	0	0		ENST00000474430.5_1_1:155151285-155154671:+|nuORF;ENST00000468878.1_1_1:155151285-155156663:+|nuORF	ENST00000474430.5_1_1:155151285-155154671:+|nuORF	ENST00000474430.5_1_1:155151285-155154671:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8697509765625	2	619.87204	1237.72953	-0.2143	-0.00013284	-4.1033	-0.0025435	-4.3176	-0.0026764	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.86587	1	9401	9401		29.17	3.1067	1	1169100			36219	12186	23981	23990	41248	41248					0.1201706431365892
LWPPRTLLRS	10	Unmodified	_LWPPRTLLRS_					0	0	0		ENST00000474430.5_1_1:155151285-155154671:+|nuORF;ENST00000468878.1_1_1:155151285-155156663:+|nuORF	ENST00000474430.5_1_1:155151285-155154671:+|nuORF	ENST00000474430.5_1_1:155151285-155154671:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8690185546875	2	619.87204	1237.72953	-0.18235	-0.00011304	-3.8434	-0.0023824	-4.0258	-0.0024955	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.86225	1	9584	9584		32.751	1.1163	1	2627900			36220	12186	23981	23990	41249	41249					0.1201706431365892
LWPPRTLLRS	10	Unmodified	_LWPPRTLLRS_					0	0	0		ENST00000474430.5_1_1:155151285-155154671:+|nuORF;ENST00000468878.1_1_1:155151285-155156663:+|nuORF	ENST00000474430.5_1_1:155151285-155154671:+|nuORF	ENST00000474430.5_1_1:155151285-155154671:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.869140625	2	619.87204	1237.72953	-0.30615	-0.00018977	-3.8344	-0.0023768	-4.1405	-0.0025666	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.86272	1	10119	10119		24.519	0	1	4796900			36221	12186	23981	23990	41250	41250					0.1201706431365892
LWPRPDPALL	10	Unmodified	_LWPRPDPALL_					0	0	0		ENST00000596657.1_1_19:6373528-6374597:+|nuORF;ENST00000245812.7_1_19:6372800-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3432006835938	2	589.340041	1176.66553	2.2135	0.0013045	2.3285	0.0013723	4.542	0.0026768	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.86718	1	9617	9617		27.882	2.3082	1	5579200			36222	9270	23982	23991	41251	41251					0.0842628415668969
LWPRPDPALL	10	Unmodified	_LWPRPDPALL_					0	0	0		ENST00000596657.1_1_19:6373528-6374597:+|nuORF;ENST00000245812.7_1_19:6372800-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3427734375	2	589.340041	1176.66553	2.472	0.0014569	2.3274	0.0013717	4.7995	0.0028285	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.74274	2	10157	10157;10279		42.396	5.9494	1	16740000			36223	9270	23982	23991	41252;41253	41252					0.0842628415668969
LWPRPDPALL	10	Unmodified	_LWPRPDPALL_					0	0	0		ENST00000596657.1_1_19:6373528-6374597:+|nuORF;ENST00000245812.7_1_19:6372800-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3424682617188	2	589.340041	1176.66553	0.80964	0.00047716	3.789	0.002233	4.5986	0.0027102	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.85934	1	9407	9407		35.618	4.0885	1	6634500			36224	9270	23982	23991	41254	41254					0.0842628415668969
LWPRPDPALL	10	Unmodified	_LWPRPDPALL_					0	0	0		ENST00000596657.1_1_19:6373528-6374597:+|nuORF;ENST00000245812.7_1_19:6372800-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3424682617188	2	589.340041	1176.66553	0.81285	0.00047905	3.7357	0.0022016	4.5485	0.0026806	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.77314	1	9308	9308		40.778	5.1599	1	6450100			36225	9270	23982	23991	41255	41255					0.0842628415668969
LWPRPDPALL	10	Unmodified	_LWPRPDPALL_					0	0	0		ENST00000596657.1_1_19:6373528-6374597:+|nuORF;ENST00000245812.7_1_19:6372800-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3428955078125	2	589.340041	1176.66553	0.83312	0.00049099	4.0027	0.002359	4.8358	0.00285	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.86718	1	9523	9523		27.882	3.3631	1	20363000			36226	9270	23982	23991	41256	41256					0.0842628415668969
LWPRPDPALL	10	Unmodified	_LWPRPDPALL_					0	0	0		ENST00000596657.1_1_19:6373528-6374597:+|nuORF;ENST00000245812.7_1_19:6372800-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	ENST00000596657.1_1_19:6373528-6374597:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3427734375	2	589.340041	1176.66553	0.82336	0.00048524	4.113	0.002424	4.9364	0.0029092	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.86718	1	11171	11171		27.882	3.3631	1	9460500			36227	9270	23982	23991	41257	41257					0.0842628415668969
LWPRQLLT	8	Unmodified	_LWPRQLLT_					0	0	0		ENST00000557314.5_1_14:20839728-20850189:-|nuORF;nc|ENSG00000129566|Q99973-2|TEP1;ENSG00000129566|ENST00000262715|TEP1	ENST00000557314.5_1_14:20839728-20850189:-|nuORF;nc|ENSG00000129566|Q99973-2|TEP1	nc|ENSG00000129566|Q99973-2|TEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8089599609375	2	513.808377	1025.6022	-0.82069	-0.00042168	2.317	0.0011905	1.4963	0.00076881	513.8095156540879	56.98	2.3357	57.013	56.616	58.952	0.033184					104	77	2	0	0	0	0.87479	1	5240	5240		30.504	1.3541	1	188070			36228	3595;13769	23983	23992	41258	41258					0.09042343439477918
LWPRVVVGLL	10	Unmodified	_LWPRVVVGLL_					0	0	0			REV__ENST00000472718.5_1_3:47844552-47844693:+|nuORF	REV__ENST00000472718.5_1_3:47844552-47844693:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3696899414062	2	576.368601	1150.72265	-0.38703	-0.00022307	1.819	0.0010484	1.432	0.00082536	576.369487649421	37.688	1.7157	38.174	37.83	39.546	0.48581					111	42	4	0	0	0	0.85939	1	3112	3112		23.042	3.0457	1	1850300	+		36229	27267	23984	23993	41259	41259					0.15331751433109275
LWPTAKKAS	9	Unmodified	_LWPTAKKAS_					0	0	0		ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2904968261719	2	501.292559	1000.57057	-0.94239	-0.00047241	-3.1642	-0.0015862	-4.1066	-0.0020586	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.74721	2	8257	8257;8448		37.159	6.6555	1	6939200			36230	14294	23985	23994	41260;41261	41260					0.07030350685522535
LWPTAKKAS	9	Unmodified	_LWPTAKKAS_					0	0	0		ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.290283203125	2	501.292559	1000.57057	-0.064942	-3.2555E-05	-4.2261	-0.0021185	-4.291	-0.002151	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.78058	1	8409	8409		30.504	3.8107	1	2854100			36231	14294	23985	23994	41262	41262					0.07030350685522535
LWPTAKKAS	9	Unmodified	_LWPTAKKAS_					0	0	0		ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2899169921875	2	501.292559	1000.57057	-0.52377	-0.00026256	-3.845	-0.0019275	-4.3688	-0.00219	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.67345	1	8574	8574		42.396	5.9494	1	2929300			36232	14294	23985	23994	41263	41263					0.07030350685522535
LWPTAKKAS	9	Unmodified	_LWPTAKKAS_					0	0	0		ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904968261719	2	501.292559	1000.57057	-0.36653	-0.00018374	-3.8537	-0.0019318	-4.2202	-0.0021156	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.35373	5	8958	8777;8813;8825;8897;8958		60.972	20.914	1	9903700			36233	14294	23985	23994	41264;41265;41266;41267;41268	41268					0.07030350685522535
LWPTAKKAS	9	Unmodified	_LWPTAKKAS_					0	0	0		ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2904968261719	2	501.292559	1000.57057	-0.50311	-0.0002522	-3.7566	-0.0018832	-4.2597	-0.0021354	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.62081	2	8404	8404;8428		45.952	15.448	1	10459000			36234	14294	23985	23994	41269;41270	41269					0.07030350685522535
LWPTAKKAS	9	Unmodified	_LWPTAKKAS_					0	0	0		ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2903747558594	2	501.292559	1000.57057	-1.5697	-0.00078686	-2.6476	-0.0013272	-4.2173	-0.0021141	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.72402	2	8493	8493;8589		38.806	2.9866	1	9242300			36235	14294	23985	23994	41271;41272	41271					0.07030350685522535
LWPTAKKAS	9	Unmodified	_LWPTAKKAS_					0	0	0		ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.290283203125	2	501.292559	1000.57057	-0.86867	-0.00043546	-3.0512	-0.0015296	-3.9199	-0.001965	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.78058	1	9779	9779		30.504	0	1	2445400			36236	14294	23985	23994	41273	41273					0.07030350685522535
LWPTAKKAS	9	Unmodified	_LWPTAKKAS_					0	0	0		ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29052734375	2	501.292559	1000.57057	-0.28392	-0.00014233	-3.9733	-0.0019918	-4.2572	-0.0021341	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.74721	1	10027	10027		37.159	6.6555	1	9038000			36237	14294	23985	23994	41274	41274					0.07030350685522535
LWPTAKKAS	9	Unmodified	_LWPTAKKAS_					0	0	0		ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29058837890625	2	501.292559	1000.57057	0.16565	8.304E-05	-4.0766	-0.0020436	-3.911	-0.0019605	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.78058	1	9847	9847		30.504	1.3541	1	2717900			36238	14294	23985	23994	41275	41275					0.07030350685522535
LWPTAKKAS	9	Unmodified	_LWPTAKKAS_					0	0	0		ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	ENST00000592761.2_1_17:76851650-76851731:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.290283203125	2	501.292559	1000.57057	-0.45423	-0.0002277	-3.8659	-0.001938	-4.3202	-0.0021657	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.62081	1	10120	10120		45.952	7.1458	1	9727400			36239	14294	23985	23994	41276	41276					0.07030350685522535
LWQRRRRPA	9	Unmodified	_LWQRRRRPA_					0	0	0		ENST00000515594.5_1_6:64345874-64401682:+|nuORF	ENST00000515594.5_1_6:64345874-64401682:+|nuORF	ENST00000515594.5_1_6:64345874-64401682:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8682250976562	2	619.870697	1237.72684	1.6172	0.0010025	-3.9245	-0.0024327	-2.3073	-0.0014302	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.7932	1	11213	11213		23.042	0.46283	1	1541100			36240	13087	23986	23995	41277	41277					0.11748653699351053
LWQRRRRPA	9	Unmodified	_LWQRRRRPA_					0	0	0		ENST00000515594.5_1_6:64345874-64401682:+|nuORF	ENST00000515594.5_1_6:64345874-64401682:+|nuORF	ENST00000515594.5_1_6:64345874-64401682:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.369384765625	2	619.870697	1237.72684	0.5439	0.00033715	-2.6958	-0.001671	-2.1519	-0.0013339	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.78058	1	11270	11270		30.504	2.4222	1	1280900			36241	13087	23986	23995	41278	41278					0.11748653699351053
LWRHFRKVFIQ	11	Unmodified	_LWRHFRKVFIQ_					0	0	0		ENST00000563230.1_1_16:79123974-79135149:+|nuORF	ENST00000563230.1_1_16:79123974-79135149:+|nuORF	ENST00000563230.1_1_16:79123974-79135149:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.6343688964844	3	510.63325	1528.87792	1.9809	0.0010115	0.89871	0.00045891	2.8796	0.0014704	510.63303476762127	104.3	2.045	104.49	103.76	105.81	0.18887					109	51	3	0	0	0	0.80813	1	12747	12747		9.6461	1.6118	1	329880			36242	13863	23987	23996	41279	41279					0.13463795287339053
LWRKGLGLRPQ	11	Unmodified	_LWRKGLGLRPQ_					0	0	0		ENSG00000221916|ENST00000408991|C19orf73	ENSG00000221916|ENST00000408991|C19orf73	ENSG00000221916|ENST00000408991|C19orf73	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9393310546875	3	441.938451	1322.79352	0.33265	0.00014701	2.713	0.001199	3.0457	0.001346	441.9395069624772	55.282	1.2267	55.373	54.736	55.962	0.091167					101	37	4	0	0	0	0.72374	1	4605	4605		27.644	8.017	1	451030			36243	8683	23988	23997	41280	41280					0.1450384447059605
LWRLFSPFV	9	Unmodified	_LWRLFSPFV_					0	0	0		ENSG00000139988|ENST00000551171|RDH12	ENSG00000139988|ENST00000551171|RDH12	ENSG00000139988|ENST00000551171|RDH12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.8317260742188	2	582.831852	1163.64915	0.82789	0.00048252	0.6465	0.0003768	1.4744	0.00085932	582.8322150120989	94.225	3.555	94.386	93.365	96.92	0.16119					184	84	3	0	0	0	0.74721	1	9605	9605		37.159	2.9866	1	780120			36244	4407	23989	23998	41281	41281					0.0738720299061697
LWRRRRTS	8	Unmodified	_LWRRRRTS_					0	0	0		nc|ENSG00000119787|Q8NHH9-2|ATL2;ENSG00000119787|ENST00000378954|ATL2	nc|ENSG00000119787|Q8NHH9-2|ATL2	nc|ENSG00000119787|Q8NHH9-2|ATL2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	565.8363647460938	2	565.836323	1129.65809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.958	1	21.026	20.526	21.526	0.068251								0	0	0	0.29978	1	527	527		21.96	2.5999	1				36245	14871	23990	23999	41282	41282					0.09844989399653059
LWSSTWSPAMC	11	Unmodified	_LWSSTWSPAMC_					0	0	0		ENST00000346872.7_2_17:37914120-37914378:-|nuORF	ENST00000346872.7_2_17:37914120-37914378:-|nuORF	ENST00000346872.7_2_17:37914120-37914378:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	635.2767333984375	2	634.775559	1267.53657	0.16242	0.0001031	3.0816	0.0019561	3.244	0.0020592	634.7773669239996	50.354	0.83449	50.262	49.722	50.557	-0.091793					37	22	2	0	0	0	0.6921	1	3938	3938		32.812	1.2826	1	145020			36246	10310	23991	24000	41283	41283					-0.08650181860025441
LWTLRAGR	8	Unmodified	_LWTLRAGR_					0	0	0		ENST00000398602.2_1_20:19998317-19998410:+|nuORF	ENST00000398602.2_1_20:19998317-19998410:+|nuORF	ENST00000398602.2_1_20:19998317-19998410:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.791015625	2	486.790518	971.566484	-0.44144	-0.00021489	3.5204	0.0017137	3.079	0.0014988	486.79201495982824	85.396	0.59827	85.843	85.471	86.069	0.44736					21	14	2	0	0	0	0.4196	1	9996	9996		38.806	0	1	247100			36247	11185	23992	24001	41284	41284					0.07956305982463618
LWTNGVGG	8	Unmodified	_LWTNGVGG_					0	0	0		ENSG00000169047|ENST00000305123|IRS1	ENSG00000169047|ENST00000305123|IRS1	ENSG00000169047|ENST00000305123|IRS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.2054138183594	2	402.205953	802.397353	3.1805	0.0012792	-3.8193	-0.0015361	-0.63874	-0.00025691	402.20435516833464	98.401	2.1792	98.45	97.455	99.634	0.048157					140	50	4	0	0	0	0.87922	1	10542	10542		31.955	1.4512	1	1692900			36248	6464	23993	24002	41285	41285					-0.011750153708817379
LWTPRLTILEA	11	Unmodified	_LWTPRLTILEA_					0	0	0		nc|ENSG00000186919|Q401N2-2|ZACN;ENSG00000186919|ENST00000334586|ZACN	nc|ENSG00000186919|Q401N2-2|ZACN	nc|ENSG00000186919|Q401N2-2|ZACN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2575988769531	3	438.258967	1311.75507	-1.2137	-0.00053193	-1.9882	-0.00087133	-3.2019	-0.0014033	438.25809944136427	29.692	1.312	29.713	29.307	30.619	0.020784					97	29	5	0	0	0	0.59831	1	1910	1910		44.639	9.1438	1	6019900			36249	7829	23994	24003	41286	41286					0.11166494045414765
LWVDLGRFK	9	Unmodified	_LWVDLGRFK_					0	0	0		ENST00000533506.5_1_14:50458571-50458706:-|nuORF	ENST00000533506.5_1_14:50458571-50458706:-|nuORF	ENST00000533506.5_1_14:50458571-50458706:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3297119140625	2	567.326934	1132.63931	0.79571	0.00045143	4.1414	0.0023495	4.9371	0.0028009	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.78536	1	9839	9839		29.15	3.5755	1	18145000			36250	13396	23995	24004	41287	41287					0.07830014985233902
LWVLLRKGY	9	Unmodified	_LWVLLRKGY_					0	0	0		nc|ENSG00000169604|Q9H6X2-5|ANTXR1;ENSG00000169604|ENST00000303714|ANTXR1	nc|ENSG00000169604|Q9H6X2-5|ANTXR1	nc|ENSG00000169604|Q9H6X2-5|ANTXR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3574829101562	2	574.352951	1146.69135	0.86564	0.00049718	4.2939	0.0024662	5.1596	0.0029634	574.3552739338568	99.781	2.6781	99.932	98.182	100.86	0.15073					107	61	3	0	0	0	0.76996	1	10367	10367		33.516	4.366	1	245470			36251	6510	23996	24005	41288	41288					0.12387178399012555
LWVWYVYRYLL	11	Unmodified	_LWVWYVYRYLL_					0	0	0		nc|ENSG00000101194|Q9BYT1-3|SLC17A9;ENST00000488738.5_1_20:61584086-61594126:+|nuORF;nc|ENSG00000101194|Q9BYT1-2|SLC17A9;ENSG00000101194|ENST00000370351|SLC17A9	nc|ENSG00000101194|Q9BYT1-3|SLC17A9	nc|ENSG00000101194|Q9BYT1-3|SLC17A9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.1466674804688	3	525.290379	1572.84931	0.19438	0.0001021	-3.9996	-0.0021009	-3.8052	-0.0019988	525.2877110274354	32.552	0.38813	32.497	32.238	32.626	-0.054337					10	8	2	0	0	0	0.18164	1	1925	1925		6.6596	0.33873	1	31339			36252	1910	23997	24006	41289	41289					0.08579632867576947
LWYLRRSL	8	Unmodified	_LWYLRRSL_					0	0	0		ENST00000299084.8_1_15:38643452-38643485:+|nuORF	ENST00000299084.8_1_15:38643452-38643485:+|nuORF	ENST00000299084.8_1_15:38643452-38643485:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8297729492188	2	553.827101	1105.63965	1.7761	0.00098364	3.5243	0.0019519	5.3004	0.0029355	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.89043	1	9266	9266		35.618	3.6634	1	1628400			36253	9777	23998	24007	41290	41290					0.09105434705088555
LWYQQTLPP	9	Unmodified	_LWYQQTLPP_					0	0	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.8174438476562	2	573.303124	1144.5917	0.16961	9.7237E-05	1.5396	0.00088264	1.7092	0.00097987	573.8056534179458	36.006	1.2348	36.287	35.817	37.052	0.28173					58	30	3	0	0	0	0.20789	1	2753	2753		38.806	16.226	1	382110			36254	2636	23999	24008	41291	41291					0.025183159943708233
LWYVEPVL	8	Unmodified	_LWYVEPVL_					0	0	0			REV__ENST00000296257.9_1_3:185349022-185349079:+|nuORF	REV__ENST00000296257.9_1_3:185349022-185349079:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8063659667969	2	509.784036	1017.55352	-1.5008	-0.00076507	-1.3534	-0.00068992	-2.8541	-0.001455	510.28385758149847	85.609	0.12802	85.767	85.675	85.803	0.15851					4	2	2	0	0	0	0.4196	1	8333	8333		44.531	22.571	1	24194	+		36255	24707	24000	24009	41292	41292					0.04544430079704398
LYAFRILALN	10	Unmodified	_LYAFRILALN_					0	0	0		nc|ENSG00000283703|P0DP72|VSIG10L2;ENSG00000283703|ENST00000686984|VSIG10L2	nc|ENSG00000283703|P0DP72|VSIG10L2	nc|ENSG00000283703|P0DP72|VSIG10L2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.360595703125	2	597.355691	1192.69683	-0.24184	-0.00014447	4.3118	0.0025757	4.07	0.0024312	597.3578636523395	100.56	3.0718	100.56	99.06	102.13	0					172	73	4	0	0	0	0.86589	1	10266	10266		29.15	1.2673	1	2923800			36256	9062	24001	24010	41293	41293					0.10818857190793096
LYAGSGTKN	9	Unmodified	_LYAGSGTKN_					0	0	0		ENSG00000132740|ENST00000255078|IGHMBP2	ENSG00000132740|ENST00000255078|IGHMBP2	ENSG00000132740|ENST00000255078|IGHMBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.735595703125	2	455.735074	909.455596	-0.28016	-0.00012768	0.7572	0.00034508	0.47704	0.0002174	455.7350341748715	31.996	0.90005	31.945	31.642	32.542	-0.051033					37	19	4	0	0	0	0.7932	1	1864	1864		23.523	0.48021	1	93087			36257	3824	24002	24011	41294	41294					-0.0027537851628949284
LYAGYMFF	8	Unmodified	_LYAGYMFF_					0	0	0			REV__ENST00000458672.5_1_7:35189804-35201650:-|nuORF	REV__ENST00000458672.5_1_7:35189804-35201650:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7030029296875	2	506.235864	1010.45718	-0.15674	-7.9349E-05	-1.4422	-0.00073011	-1.599	-0.00080946	506.2348692363655	32.958	0.57927	32.903	32.673	33.252	-0.05434					19	14	2	0	0	0	0.4196	1	1956	1956		24.504	6.1796	1	34443	+		36258	22243	24003	24012	41295	41295					-0.04763460751883031
LYALATSL	8	Unmodified	_LYALATSL_					0	0	0			REV__nc|ENSG00000169398|Q05397-4|PTK2	REV__nc|ENSG00000169398|Q05397-4|PTK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.2459411621094	2	426.247286	850.48002	-1.7038	-0.00072625	-1.2223	-0.00052102	-2.9262	-0.0012473	426.246697883185	87.448	3.9173	87.649	85.72	89.637	0.20114					165	92	2	0	0	0	0.86791	1	8576	8576		28.254	2.8041	1	4015800	+		36259	21576	24004	24013	41296	41296					0.04879881637236849
LYALKQSSILN	11	Unmodified	_LYALKQSSILN_					0	0	0		ENSG00000198839|ENST00000361822|ZNF277	ENSG00000198839|ENST00000361822|ZNF277	ENSG00000198839|ENST00000361822|ZNF277	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.3660888671875	2	625.36117	1248.70779	4.03	0.0025202	3.9969	0.0024995	8.0269	0.0050197	625.3635366275834	103.44	0.6306	103.71	103.46	104.09	0.26524					25	14	2	0	0	0	0.53361	1	12633	12633		49.536	1.5765	1	5387700			36260	8349	24005	24014	41297	41297					0.09338214774425069
LYANRTPMYM	10	Unmodified	_LYANRTPMYM_					0	0	0		ENSG00000174482|ENST00000698399|LINGO2	ENSG00000174482|ENST00000698399|LINGO2	ENSG00000174482|ENST00000698399|LINGO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	630.2968139648438	2	630.299201	1258.58385	0.77751	0.00049006	-4.4036	-0.0027756	-3.6261	-0.0022855	630.2963652604675	23.87	1.0195	23.826	23.466	24.486	-0.043221					83	28	4	0	0	0	0.8608	1	803	803		34.173	5.0025	1	436810			36261	6937	24006	24015	41298	41298					-0.03509902589075864
LYAQKQMN	8	Unmodified	_LYAQKQMN_					0	0	0		ENST00000345122.7_1_14:32559996-32560074:+|nuORF	ENST00000345122.7_1_14:32559996-32560074:+|nuORF	ENST00000345122.7_1_14:32559996-32560074:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.24957275390625	2	498.252577	994.490601	-0.99209	-0.00049431	-3.1151	-0.0015521	-4.1072	-0.0020464	498.25142789231467	84.759	2.4523	84.759	83.586	86.038	0					132	57	3	0	0	0	0.88915	1	7939	7939		35.201	3.6709	1	112180			36262	10302	24007	24016	41299	41299					-0.006864589799761234
LYAWAGSEV	9	Unmodified	_LYAWAGSEV_					0	0	0			REV__ENSG00000198837|ENST00000361217|DENND4B	REV__ENSG00000198837|ENST00000361217|DENND4B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.78863525390625	2	498.245275	994.475997	1.4519	0.00072342	-2.4482	-0.0012198	-0.99628	-0.00049639	498.2440087602618	24.179	2.1197	23.665	22.47	24.589	-0.51365					67	49	2	0	0	0	0.20789	1	1037	1037		50.025	2.1089	1	98752	+		36263	23392	24008	24017	41300	41300					-0.021462078564809417
LYCYLFLHRHS	11	Unmodified	_LYCYLFLHRHS_					0	0	0		ENST00000376834.7_1_9:77611421-77611472:-|nuORF	ENST00000376834.7_1_9:77611421-77611472:-|nuORF	ENST00000376834.7_1_9:77611421-77611472:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.5800476074219	3	484.579935	1450.71798	0.72048	0.00034913	-0.30187	-0.00014628	0.41861	0.00020285	484.579843854113	15.32	0.31642	15.296	15.169	15.485	-0.024207					27	11	4	0	0	0	0.74771	1	15	15		22.562	3.2989	1	171110			36264	10824	24009	24018	41301	41301					0.010644992280049337
LYDFIHTSF	9	Unmodified	_LYDFIHTSF_					0	0	0		ENSG00000175595|ENST00000311895|ERCC4	ENSG00000175595|ENST00000311895|ERCC4	ENSG00000175595|ENST00000311895|ERCC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.7792358398438	2	571.779482	1141.54441	-0.024618	-1.4076E-05	0.041578	2.3773E-05	0.01696	9.6972E-06	571.7794100521135	77.721	0.61642	78.127	77.807	78.424	0.40531					29	14	3	0	0	0	0.09311	1	8849	8849		94.006	14.555	1	488400			36265	7027	24010	24019	41302	41302					-0.02069963276630915
LYDFIHTSF	9	Unmodified	_LYDFIHTSF_					0	0	0		ENSG00000175595|ENST00000311895|ERCC4	ENSG00000175595|ENST00000311895|ERCC4	ENSG00000175595|ENST00000311895|ERCC4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	571.779482	1141.54441	0.24574	0.00014051	-0.19884	-0.00011369	0.046909	2.6821E-05	571.7791571273192	77.642	0.66656	78.21	77.835	78.502	0.56836	0.041751	-0.00013922	NaN	94.006	29	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	479940			36266	7027	24010	24019							-0.02069963276630915
LYDRLLKLKEM	11	Unmodified	_LYDRLLKLKEM_					0	0	0		ENST00000559040.1_1_15:49448112-49518881:+|nuORF;nc|ENSG00000156958|Q01415-2|GALK2	ENST00000559040.1_1_15:49448112-49518881:+|nuORF	ENST00000559040.1_1_15:49448112-49518881:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	474.73895263671875	3	474.611012	1420.81121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.323	1	74.454	73.954	74.954	0.13126								0	0	0	0.56276	1	6870	6870		20.03	0.7678	1				36267	13802	24011	24020	41303	41303					0.11763378890532294
LYDRVLKY	8	Unmodified	_LYDRVLKY_					0	0	0		ENST00000586859.1_1_17:74039843-74041464:-|nuORF;nc|ENSG00000167881|Q9UHB9-3|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;ENSG00000167881|ENST00000307877|SRP68	ENST00000586859.1_1_17:74039843-74041464:-|nuORF	ENST00000586859.1_1_17:74039843-74041464:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.3057250976562	2	535.305667	1068.59678	0.084848	4.5419E-05	-0.34613	-0.00018528	-0.26128	-0.00013986	535.3052749645661	51.367	0.71123	51.802	51.492	52.203	0.43505					41	16	3	0	0	0	0.057698	3	5100	5088;5100;5112		125.81	23.041	1	2210400			36268	6336	24012	24021	41304;41305;41306	41305					0.06522619856991696
LYDRVLKY	8	Unmodified	_LYDRVLKY_					0	0	0		ENST00000586859.1_1_17:74039843-74041464:-|nuORF;nc|ENSG00000167881|Q9UHB9-3|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;ENSG00000167881|ENST00000307877|SRP68	ENST00000586859.1_1_17:74039843-74041464:-|nuORF	ENST00000586859.1_1_17:74039843-74041464:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.3067016601562	2	535.305667	1068.59678	0.53704	0.00028748	-0.81985	-0.00043887	-0.28281	-0.00015139	535.3050912240484	51.141	0.70057	51.893	51.572	52.273	0.75174					41	16	3	0	0	0	0.13608	3	5080	5080;5092;5103		113.41	14.037	1	2410400			36269	6336	24012	24021	41307;41308;41309	41307					0.06522619856991696
LYEWEQGF	8	Unmodified	_LYEWEQGF_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.23974609375	2	536.242732	1070.47091	0.14351	7.6958E-05	-4.0807	-0.0021883	-3.9372	-0.0021113	536.2403637432138	53.545	0.95256	53.959	53.416	54.369	0.4139					48	22	3	0	0	0	0.91005	1	5396	5396		42.474	6.8562	1	1390800			36270	6360	24013	24022	41310	41310					-0.06150511719079077
LYEWEQGF	8	Unmodified	_LYEWEQGF_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2416381835938	2	536.242732	1070.47091	-0.60211	-0.00032288	-2.891	-0.0015503	-3.4931	-0.0018731	536.2409283481725	53.325	0.79077	53.94	53.572	54.363	0.61436					53	18	4	0	0	0	0.52826	1	5407	5407		74.517	0.26156	1	1313100			36271	6360	24013	24022	41311	41311					-0.06150511719079077
LYFIVLVRGQ	10	Unmodified	_LYFIVLVRGQ_					0	0	0		ENST00000490339.1_1_1:236737366-236737993:-|nuORF	ENST00000490339.1_1_1:236737366-236737993:-|nuORF	ENST00000490339.1_1_1:236737366-236737993:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2467956542969	3	403.24477	1206.71248	2.718	0.001096	2.5029	0.0010093	5.2209	0.0021053	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.86802	1	11464	11464		27.047	0	1	15597000			36272	12669	24014	24023	41312	41312					0.11739143707836774
LYFLLLCFGY	10	Unmodified	_LYFLLLCFGY_					0	0	0			REV__ENSG00000089060|ENST00000680972|SLC8B1	REV__ENSG00000089060|ENST00000680972|SLC8B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.2215270996094	3	417.887594	1250.64095	2.184	0.00091266	-1.7095	-0.00071437	0.47451	0.00019829	417.8867693245546	53.202	1.111	53.22	52.665	53.776	0.017487					68	30	3	0	0	0	0.86348	1	4675	4675		31.53	8.0071	1	213950	+		36273	16959	24015	24024	41313	41313					0.02565887958962776
LYFLLLCFGY	10	Unmodified	_LYFLLLCFGY_					0	0	0			REV__ENSG00000089060|ENST00000680972|SLC8B1	REV__ENSG00000089060|ENST00000680972|SLC8B1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	417.887594	1250.64095	-0.11436	-4.7791E-05	0.52684	0.00022016	0.41248	0.00017237	417.88771077694037	53.208	0.90549	53.205	52.782	53.687	-0.0033035	0.025023	0.0010232	NaN	31.53	59	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	205780	+		36274	16959	24015	24024							0.02565887958962776
LYFLLLCFGY	10	Unmodified	_LYFLLLCFGY_					0	0	0			REV__ENSG00000089060|ENST00000680972|SLC8B1	REV__ENSG00000089060|ENST00000680972|SLC8B1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	417.887594	1250.64095	-0.71815	-0.0003001	1.1465	0.00047912	0.42839	0.00017902	417.8879737424406	53.138	1.1886	53.115	52.584	53.773	-0.023876	-0.065086	0.0018001	NaN	31.53	67	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	218290	+		36275	16959	24015	24024							0.02565887958962776
LYFLLLCFGY	10	Unmodified	_LYFLLLCFGY_					0	0	0			REV__ENSG00000089060|ENST00000680972|SLC8B1	REV__ENSG00000089060|ENST00000680972|SLC8B1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	417.887594	1250.64095	2.184	0.00091266	-1.7095	-0.00071437	0.47451	0.00019829	417.8867693245546	53.202	1.111	53.22	52.665	53.776	0.017487	0.040063	-0.0017804	NaN	31.53	68	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	213950	+		36276	16959	24015	24024							0.02565887958962776
LYGGQKGYLPL	11	Unmodified	_LYGGQKGYLPL_					0	0	0		ENST00000377990.6_2_2:65296717-65296849:+|nuORF	ENST00000377990.6_2_2:65296717-65296849:+|nuORF	ENST00000377990.6_2_2:65296717-65296849:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.8336791992188	2	604.837331	1207.66011	0.070625	4.2716E-05	-3.1989	-0.0019348	-3.1282	-0.0018921	604.8352066478271	50.2	0.61456	50.108	49.762	50.377	-0.091797					35	15	3	0	0	0	0.67041	1	3941	3941		34.173	0	1	249710			36277	10849	24016	24025	41314	41314					0.06458560574242256
LYGSGKRT	8	Unmodified	_LYGSGKRT_					0	0	0			REV__ENST00000367967.7_2_1:161519549-161520338:-|nuORF	REV__ENST00000367967.7_2_1:161519549-161520338:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.24627685546875	2	441.245609	880.476666	1.0224	0.00045112	-0.49536	-0.00021858	0.52701	0.00023254	441.24524073514874	23.247	0.80435	22.673	22.29	23.094	-0.57415					33	19	2	0	0	0	0.92457	1	1019	1019		47.916	5.5195	1	243520	+		36278	25582	24017	24026	41315	41315					0.0316463158321767
LYGSLQEGPA	10	Unmodified	_LYGSLQEGPA_					0	0	0		nc|ENSG00000165891|Q96AV8-2|E2F7;nc|ENSG00000165891|Q96AV8-3|E2F7;ENSG00000165891|ENST00000322886|E2F7	nc|ENSG00000165891|Q96AV8-2|E2F7	nc|ENSG00000165891|Q96AV8-2|E2F7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.7605590820312	2	517.761289	1033.50803	-1.2386	-0.0006413	1.4296	0.00074017	0.19095	9.8867E-05	517.7616890631605	39.195	0.90529	39.75	39.277	40.183	0.55449					47	20	3	0	0	0	0.23822	1	3293	3293		79.713	14.247	1	439310			36279	6132	24018	24027	41316	41316					-0.007388401733123828
LYHFRGDKDE	10	Unmodified	_LYHFRGDKDE_					0	0	0			REV__nc|ENSG00000003137|Q9NR63-2|CYP26B1	REV__nc|ENSG00000003137|Q9NR63-2|CYP26B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3048706054688	2	640.306926	1278.5993	0.023075	1.4775E-05	-0.30524	-0.00019545	-0.28217	-0.00018067	640.3064501713893	110.16	1.9247	110.16	109.88	111.81	0					81	64	2	0	0	0	0.85466	1	11528	11528		20.947	1.8434	1	88002	+		36280	16049	24019	24028	41317	41317					-0.02885576476001006
LYHHKKLL	8	Unmodified	_LYHHKKLL_					0	0	0			REV__nc|ENSG00000196419|P12956-2|XRCC6	REV__nc|ENSG00000196419|P12956-2|XRCC6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.2900390625	2	526.324194	1050.63383	0.407	0.00021421	0.71029	0.00037384	1.1173	0.00058806	526.32460482339	52.597	1.0314	53.021	52.723	53.754	0.42348					35	24	2	0	0	0	0.4196	1	5365	5365		21.702	7.927	1	181720	+		36281	23127	24020	24029	41318	41318					0.110543361934333
LYHRWNFMDLM	11	Unmodified	_LYHRWNFMDLM_					0	0	0			REV__ENST00000370119.8_1_1:101203842-101203926:+|nuORF	REV__ENST00000370119.8_1_1:101203842-101203926:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2977600097656	3	509.240813	1524.70061	0.82808	0.00042169	2.8732	0.0014631	3.7012	0.0018848	509.2421840016419	30.29	0.43819	30.201	30.048	30.486	-0.089544					13	9	2	0	0	0	0.17835	1	1994	1994		21.78	8.2725	1	58424	+		36282	25641	24021	24030	41319	41319					-0.04075164369328377
LYHRWNFMDLM	11	Unmodified	_LYHRWNFMDLM_					0	0	0			REV__ENST00000370119.8_1_1:101203842-101203926:+|nuORF	REV__ENST00000370119.8_1_1:101203842-101203926:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	509.240813	1524.70061	-1.729	-0.00088045	2.8325	0.0014424	1.1035	0.00056197	509.24180433793686	30.451	0.24048	30.451	30.293	30.534	0	0.11995	-0.0001315	NaN	21.78	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20212	+		36283	25641	24021	24030							-0.04075164369328377
LYHRWNFMDLM	11	Unmodified	_LYHRWNFMDLM_					0	0	0			REV__ENST00000370119.8_1_1:101203842-101203926:+|nuORF	REV__ENST00000370119.8_1_1:101203842-101203926:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	509.240813	1524.70061	-0.064763	-3.298E-05	2.5426	0.0012948	2.4778	0.0012618	509.2416203441577	30.388	0.39467	30.341	30.181	30.575	-0.047064	0.0098187	-0.00057436	NaN	21.78	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40101	+		36284	25641	24021	24030							-0.04075164369328377
LYHRWNFMDLM	11	Unmodified	_LYHRWNFMDLM_					0	0	0			REV__ENST00000370119.8_1_1:101203842-101203926:+|nuORF	REV__ENST00000370119.8_1_1:101203842-101203926:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	509.240813	1524.70061	-0.12952	-6.5957E-05	3.5704	0.0018182	3.4408	0.0017522	509.242362177348	30.347	0.45783	30.332	30.164	30.622	-0.015167	0.00088058	0.00099574	NaN	21.78	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31926	+		36285	25641	24021	24030							-0.04075164369328377
LYHTPVTP	8	Unmodified	_LYHTPVTP_					0	0	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.24920654296875	2	464.25036	926.486168	-1.3162	-0.00061105	1.4169	0.00065779	0.10069	4.6745E-05	464.2508553442998	59.206	0.74244	59.598	59.191	59.933	0.39179					34	17	3	0	0	0	0.79972	1	6213	6213		62.978	15.063	1	523950			36286	2636	24022	24031	41320	41320					0.01998399868762135
LYIFFSILIM	10	Unmodified	_LYIFFSILIM_					0	0	0		ENSG00000212126|ENST00000506868|TAS2R50	ENSG00000212126|ENST00000506868|TAS2R50	ENSG00000212126|ENST00000506868|TAS2R50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.5749816894531	3	420.575128	1258.70355	0.24832	0.00010444	0.28565	0.00012014	0.53397	0.00022457	420.57514982697614	46.914	0.73291	46.953	46.582	47.315	0.038181					60	19	4	0	0	0	0.84816	1	3501	3501		17.468	0.75062	1	1274000			36287	8569	24023	24032	41321	41321					0.08455034027156216
LYIFLVYA	8	Unmodified	_LYIFLVYA_					0	0	0		nc|ENSG00000180264|Q7Z7M1|ADGRD2;ENSG00000180264|ENST00000696331|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2910461425781	2	501.288954	1000.56336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.971	1	89.442	88.942	89.942	0.47068								0	0	0	0.2945	1	10531	10531		33.493	2.9893	1				36288	15130	24024	24033	41322	41322					0.06309618085083457
LYIHLEQSRRN	11	Unmodified	_LYIHLEQSRRN_					0	0	0		ENST00000497432.5_1_2:158343873-158344534:-|nuORF	ENST00000497432.5_1_2:158343873-158344534:-|nuORF	ENST00000497432.5_1_2:158343873-158344534:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	477.264892578125	3	476.928392	1427.76335	-1.861	-0.00088758	0.72183	0.00034426	-1.1392	-0.00054332	476.9284890354769	33.006	0.49501	33.006	32.798	33.293	0					32	21	2	0	0	0	0.78391	1	1686	1686		14.694	0	1	53530			36289	12806	24025	24034	41323	41323					0.06657441014772303
LYIHLEQSRRN	11	Unmodified	_LYIHLEQSRRN_					0	0	0		ENST00000497432.5_1_2:158343873-158344534:-|nuORF	ENST00000497432.5_1_2:158343873-158344534:-|nuORF	ENST00000497432.5_1_2:158343873-158344534:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.9276123046875	3	476.928392	1427.76335	0.16725	7.9765E-05	-0.359	-0.00017122	-0.19176	-9.1455E-05	477.26296906021275	32.793	0.27972	32.903	32.791	33.07	0.10991					15	13	2	0	0	0	0.74771	1	1553	1553		22.562	0.78116	1	57309			36290	12806	24025	24034	41324	41324					0.06657441014772303
LYIIFSVWVGS	11	Unmodified	_LYIIFSVWVGS_					0	0	0			REV__ENST00000598734.1_1_19:39421606-39422228:+|nuORF	REV__ENST00000598734.1_1_19:39421606-39422228:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3624267578125	2	642.355357	1282.69616	7.1578	0.0045978	3.3886	0.0021767	10.546	0.0067745	642.357698090965	112.58	0.75734	112.61	112.29	113.05	0.032707					52	25	4	0	0	0	0.72228	1	13638	13638		27.882	3.6795	1	69953	+		36291	29288	24026	24035	41325	41325					0.06612017751081112
LYILGDKAQL	10	Unmodified	_LYILGDKAQL_					0	0	0		nc|ENSG00000100241|O95248|SBF1;ENSG00000100241|ENST00000380817|SBF1;nc|ENSG00000100241|O95248-4|SBF1	nc|ENSG00000100241|O95248|SBF1	nc|ENSG00000100241|O95248|SBF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3297729492188	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.86218	1	9753	9753		32.812	1.2826	1	15673000			36292	1812	24027	24036	41326	41326					0.0881915819995811
LYILGDKAQL	10	Unmodified	_LYILGDKAQL_					0	0	0		nc|ENSG00000100241|O95248|SBF1;ENSG00000100241|ENST00000380817|SBF1;nc|ENSG00000100241|O95248-4|SBF1	nc|ENSG00000100241|O95248|SBF1	nc|ENSG00000100241|O95248|SBF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3296508789062	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.67571	2	9414	9414;9438		45.972	9.5255	1	18558000			36293	1812	24027	24036	41327;41328	41327					0.0881915819995811
LYILQRASL	9	Unmodified	_LYILQRASL_					0	0	0		ENST00000500268.6_1_4:10455867-10456122:-|nuORF	ENST00000500268.6_1_4:10455867-10456122:-|nuORF	ENST00000500268.6_1_4:10455867-10456122:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8265991210938	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.79	1	105.02	104.52	105.52	0.2268								0	0	0	0.30416	1	12805	12805		29.15	3.5755	1				36294	12838	24028	24037	41329	41329					0.1041859526535518
LYISSSQT	8	Unmodified	_LYISSSQT_					0	0	0		nc|ENSG00000211802|A0A0B4J277|TRAV22	nc|ENSG00000211802|A0A0B4J277|TRAV22	nc|ENSG00000211802|A0A0B4J277|TRAV22	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.57550048828125	2	449.729458	897.444362	0.17628	7.9278E-05	2.6711	0.0012013	2.8474	0.0012806	449.7297903334836	30.401	0.39431	30.405	30.272	30.667	0.0037193					11	8	2	0	0	0	0.4196	1	2032	2032		6.7355	0	1	34064			36295	15236	24029	24038	41330	41330					-0.008462006104196007
LYKGAHVKP	9	Unmodified	_LYKGAHVKP_					0	0	0		nc|ENSG00000138081|Q86XK2-3|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11;ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-2|FBXO11	nc|ENSG00000138081|Q86XK2-3|FBXO11;nc|ENSG00000138081|Q86XK2-2|FBXO11	nc|ENSG00000138081|Q86XK2-3|FBXO11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.3010559082031	2	506.800552	1011.58655	-1.3749	-0.00069679	2.6914	0.001364	1.3166	0.00066724	506.80194872279327	55.407	1.1602	55.407	54.998	56.159	0					51	32	2	0	0	0	0.78058	1	4715	4715		30.504	0	1	69144			36296	4267;14951	24030	24039	41331	41331					0.08122056922422871
LYKGIRSGGK	10	Unmodified	_LYKGIRSGGK_					0	0	0			REV__ENST00000474118.5_1_2:201910285-201936243:-|nuORF	REV__ENST00000474118.5_1_2:201910285-201936243:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.8193969726562	2	539.822015	1077.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.796	1	44.247	43.747	44.747	0.45025								0	0	0	0.45132	1	3982	3982		33.922	4.7516	1		+		36297	27292	24031	24040	41332	41332					0.09376826979860198
LYKIGTFKIQI	11	Unmodified	_LYKIGTFKIQI_					0	0	0			REV__ENST00000563827.5_1_16:71901919-71917343:-|nuORF	REV__ENST00000563827.5_1_16:71901919-71917343:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.93878173828125	3	441.939346	1322.79621	-0.49593	-0.00021917	1.7565	0.00077626	1.2605	0.00055709	441.9399207304678	55.239	1.1399	55.213	54.702	55.842	-0.026581					95	31	4	0	0	0	0.77205	1	5083	5083		17.167	3.0807	1	363460	+		36298	28811	24032	24041	41333	41333					0.14772255084903918
LYKIGTFKIQI	11	Unmodified	_LYKIGTFKIQI_					0	0	0			REV__ENST00000563827.5_1_16:71901919-71917343:-|nuORF	REV__ENST00000563827.5_1_16:71901919-71917343:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2724609375	3	441.939346	1322.79621	0.44003	0.00019447	0.50857	0.00022475	0.9486	0.00041922	441.9393914889037	56.404	2.26	56.437	55.731	57.991	0.033184					145	81	3	0	0	0	0.77803	1	5162	5162		15.921	1.6774	1	750870	+		36299	28811	24032	24041	41334	41334					0.14772255084903918
LYKIPQGVHLK	11	Unmodified	_LYKIPQGVHLK_					0	0	0		ENSG00000168152|ENST00000302236|THAP9	ENSG00000168152|ENST00000302236|THAP9	ENSG00000168152|ENST00000302236|THAP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3947143554688	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.69995	1	12374	12374		31.53	9.8441	1	2297700			36300	6378	24033	24042	41335	41335					0.14054504144928615
LYKPVDRVTR	10	Unmodified	_LYKPVDRVTR_					0	0	0		nc|ENSG00000186716|P11274-2|BCR;ENSG00000186716|ENST00000305877|BCR	nc|ENSG00000186716|P11274-2|BCR	nc|ENSG00000186716|P11274-2|BCR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.87109375	2	623.866954	1245.71936	1.336	0.00083349	4.1968	0.0026182	5.5328	0.0034517	623.8694839910095	104.33	2.0015	104.5	104.05	106.06	0.17096					147	50	4	0	0	0	0.86047	1	11050	11050		23.523	1.5628	1	2830400			36301	7814	24034	24043	41336	41336					0.10632456588405148
LYKRIFVLLS	10	Unmodified	_LYKRIFVLLS_					0	0	0		ENST00000602540.5_1_12:76422921-76423041:-|nuORF	ENST00000602540.5_1_12:76422921-76423041:-|nuORF	ENST00000602540.5_1_12:76422921-76423041:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3819580078125	2	626.394816	1250.77508	1.3729	0.00085996	2.9731	0.0018624	4.346	0.0027223	626.8982456009686	112.19	0.28555	112.3	112.2	112.48	0.10638					18	10	2	0	0	0	0.37624	1	12091	12091		14.865	8.5522	1	774140			36302	14409	24035	24044	41337	41337					0.15972289776050275
LYKVMKSK	8	Oxidation (M)	_LYKVM(Oxidation (M))KSK_		LYKVM(1)KSK		LYKVM(85)KSK	0	0	1			REV__ENSG00000235711|ENST00000421388|ANKRD34C	REV__ENSG00000235711|ENST00000421388|ANKRD34C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.80010986328125	2	506.79662	1011.57869	3.3125	0.0016788	4.0137	0.0020341	7.3262	0.0037129	506.7985401947884	26.02	1.0059	25.589	25.272	26.278	-0.4311					54	22	4	0	0	0	0.3646	1	1405	1405		85.359	8.5853	1	1944600	+		36303	23785	24036	24045	41338	41338		368			0.07336161610646741
LYKWDLLDSL	10	Unmodified	_LYKWDLLDSL_					0	0	0			REV__nc|ENSG00000104812|P13807-2|GYS1	REV__nc|ENSG00000104812|P13807-2|GYS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.36865234375	2	633.342446	1264.67034	1.4685	0.00093009	-1.8078	-0.001145	-0.3393	-0.00021489	633.3412977404495	97.816	0.13188	98.044	97.951	98.083	0.22788					4	2	2	0	0	0	0.37624	1	10132	10132		23.523	0	1	29602	+		36304	17473	24037	24046	41339	41339					0.04859123508799712
LYLFLFVVF	9	Unmodified	_LYLFLFVVF_					0	0	0			REV__ENSG00000198965|ENST00000641067|OR10R2	REV__ENSG00000198965|ENST00000641067|OR10R2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.8407592773438	2	580.841354	1159.66815	-0.43283	-0.00025141	-0.96751	-0.00056197	-1.4003	-0.00081338	580.8405993802119	69.859	0.92783	69.822	69.57	70.498	-0.036957					124	48	3	0	0	0	0.78292	1	6799	6799		29.842	2.7942	1	18374000	+		36305	23431	24038	24047	41340	41340					0.09470739561675146
LYLGRRTLR	9	Unmodified	_LYLGRRTLR_					0	0	0			REV__ENSG00000146904|ENST00000275815|EPHA1	REV__ENSG00000146904|ENST00000275815|EPHA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3564453125	2	574.356557	1146.69856	1.1071	0.0006359	-2.2805	-0.0013098	-1.1733	-0.0006739	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.78983	1	10703	10703		27.882	1.1893	1	708140	+		36306	20039	24039	24048	41341	41341					0.13107910999406158
LYLGRRTLR	9	Unmodified	_LYLGRRTLR_					0	0	0			REV__ENSG00000146904|ENST00000275815|EPHA1	REV__ENSG00000146904|ENST00000275815|EPHA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3569946289062	2	574.356557	1146.69856	0.5994	0.00034427	-1.7354	-0.00099676	-1.136	-0.00065249	574.3554932610225	99.489	2.9336	99.712	98.122	101.06	0.22262					130	68	2	0	0	0	0.7932	1	10368	10368		20.947	0.95016	1	294880	+		36307	20039	24039	24048	41342	41342					0.13107910999406158
LYLHFSCLK	9	Carbamidomethyl (C)	_LYLHFSC(Carbamidomethyl (C))LK_	LYLHFSC(1)LK		LYLHFSC(100)LK		0	1	0			REV__ENST00000478793.1_1_3:113667004-113667634:+|nuORF	REV__ENST00000478793.1_1_3:113667004-113667634:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8090209960938	2	590.812802	1179.61105	-2.5816	-0.0015252	-4.0952	-0.0024195	-6.6768	-0.0039448	590.810388094793	59.822	1.6947	59.855	59.336	61.031	0.032822					113	47	3	0	0	0	0.062302	3	5524	5524;5575;5595		102.77	23.322	1	6301700	+		36308	27389	24040	24049	41343;41344;41345	41343	334				0.02842949013620455
LYLINAASLW	10	Unmodified	_LYLINAASLW_					0	0	0		ENST00000454175.1_1_7:99103105-99103198:+|nuORF	ENST00000454175.1_1_7:99103105-99103198:+|nuORF	ENST00000454175.1_1_7:99103105-99103198:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.35400390625	2	582.326599	1162.63865	0.71911	0.00041876	1.5437	0.00089893	2.2628	0.0013177	582.3276972199922	103.19	0.30817	103.37	103.12	103.43	0.18298					12	7	2	0	0	0	0.37624	1	10884	10884		21.96	0	1	826280			36309	11939	24041	24050	41346	41346					0.06383175545511222
LYLLALGANL	10	Unmodified	_LYLLALGANL_					0	0	0		ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8182373046875	2	530.823692	1059.63283	-1.4217	-0.00075466	-4.306	-0.0022857	-5.7277	-0.0030404	530.821613470056	85.179	0.99523	85.328	84.972	85.967	0.14952					37	22	2	0	0	0	0.37624	1	8311	8311		37.159	0	1	107610			36310	7359	24042	24051	41347	41347					0.10540077033851958
LYLLAVRVFN	10	Unmodified	_LYLLAVRVFN_					0	0	0		ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.24688720703125	3	403.24477	1206.71248	2.718	0.001096	2.5029	0.0010093	5.2209	0.0021053	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.8545	2	11571	11499;11571		36.447	7.4843	1	15597000			36311	7479	24043	24052	41348;41349	41349					0.11739143707859512
LYLLAVRVFN	10	Unmodified	_LYLLAVRVFN_					0	0	0		ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.246826171875	3	403.24477	1206.71248	3.1806	0.0012826	2.1516	0.00086761	5.3322	0.0021502	403.2455898338112	104.57	4.2773	104.61	103.55	107.83	0.039864					310	101	5	0	0	0	0.85834	4	11370	11358;11370;11406;11517		35.152	6.5753	1	15278000			36312	7479	24043	24052	41350;41351;41352;41353	41351					0.11739143707859512
LYLLAVRVFN	10	Unmodified	_LYLLAVRVFN_					0	0	0		ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3663330078125	2	604.363516	1206.71248	1.0484	0.00063359	3.8594	0.0023325	4.9078	0.0029661	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.85981	1	11130	11130		16.473	0	1	105850000			36313	7479	24043	24052	41354	41354					0.11739143707859512
LYLLAVRVFN	10	Unmodified	_LYLLAVRVFN_					0	0	0		ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	ENSG00000182885|ENST00000333493|ADGRG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.2471923828125	3	403.24477	1206.71248	2.9965	0.0012083	2.319	0.00093511	5.3155	0.0021434	403.2459676680147	104.3	1.9938	104.48	103.68	105.68	0.18887					128	50	4	0	0	0	0.86698	1	12701	12701		28.081	6.3011	1	496390			36314	7479	24043	24052	41355	41355					0.11739143707859512
LYLLHRVTY	9	Unmodified	_LYLLHRVTY_					0	0	0		ENSG00000185112|ENST00000329759|FAM43A	ENSG00000185112|ENST00000329759|FAM43A	ENSG00000185112|ENST00000329759|FAM43A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3426513671875	2	589.340041	1176.66553	2.2135	0.0013045	2.3285	0.0013723	4.542	0.0026768	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.78058	1	9835	9835		30.504	0.18592	1	5579200			36315	7682	24044	24053	41356	41356					0.08426284156712427
LYLLHRVTY	9	Unmodified	_LYLLHRVTY_					0	0	0		ENSG00000185112|ENST00000329759|FAM43A	ENSG00000185112|ENST00000329759|FAM43A	ENSG00000185112|ENST00000329759|FAM43A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.343017578125	2	589.340041	1176.66553	0.83312	0.00049099	4.0027	0.002359	4.8358	0.00285	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.77546	1	9776	9776		31.955	0.42505	1	20363000			36316	7682	24044	24053	41357	41357					0.08426284156712427
LYLLRGMQCL	10	Unmodified	_LYLLRGMQCL_					0	0	0			REV__ENST00000409558.8_1_2:64141407-64147088:-|nuORF	REV__ENST00000409558.8_1_2:64141407-64147088:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.17333984375	2	605.327762	1208.64097	-0.12982	-7.8581E-05	-1.8738	-0.0011342	-2.0036	-0.0012128	605.3266046113596	34.509	0.3237	34.453	34.216	34.54	-0.056385					9	6	2	0	0	0	0.37624	1	2146	2146		27.882	12.24	1	18485	+		36317	26349	24045	24054	41358	41358					0.044995646873303485
LYLLSNVAF	9	Unmodified	_LYLLSNVAF_					0	0	0			REV__ENSG00000071894|ENST00000616140|CPSF1	REV__ENSG00000071894|ENST00000616140|CPSF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.2582397460938	2	520.294768	1038.57498	0.20875	0.00010861	-0.79133	-0.00041172	-0.58258	-0.00030311	520.2943267569167	94.699	0.54268	95.121	94.892	95.435	0.42207					21	12	2	0	0	0	0.20789	1	11348	11348		71.296	12.514	1	194650	+		36318	16630	24046	24055	41359	41359					0.05723815108422059
LYLQTLNLL	9	Unmodified	_LYLQTLNLL_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN;REV__nc|ENSG00000033122|Q96NW7-2|LRRC7	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.8279418945312	2	545.828975	1089.6434	-0.35864	-0.00019575	-0.18098	-9.8785E-05	-0.53962	-0.00029454	545.8287539646547	60.31	1.0281	60.296	59.859	60.888	-0.013729					68	27	4	0	0	0	0.55097	1	5542	5542		49.442	0	1	1311700	+		36319	17968;15454	24047	24056	41360	41360					0.10216059688286805
LYLRTHPVIL	10	Unmodified	_LYLRTHPVIL_					0	0	0		ENST00000520094.1_1_8:125568609-125570205:-|nuORF	ENST00000520094.1_1_8:125568609-125570205:-|nuORF	ENST00000520094.1_1_8:125568609-125570205:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.8792724609375	2	612.876791	1223.73903	3.0905	0.0018941	1.401	0.00085862	4.4914	0.0027527	612.8774407741583	104.71	3.9916	104.67	103.85	107.84	-0.04039					302	94	6	0	0	0	0.5766	1	11528	11528		51.335	3.6781	1	48609000			36320	13156	24048	24057	41361	41361					0.13610832599169953
LYLRTHPVIL	10	Unmodified	_LYLRTHPVIL_					0	0	0		ENST00000520094.1_1_8:125568609-125570205:-|nuORF	ENST00000520094.1_1_8:125568609-125570205:-|nuORF	ENST00000520094.1_1_8:125568609-125570205:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.8795776367188	2	612.876791	1223.73903	1.1743	0.00071971	3.3242	0.0020373	4.4985	0.002757	612.878611922605	104.31	3.5817	104.48	103.81	107.39	0.17096					311	89	7	0	0	0	0.8608	1	11112	11112		34.173	0	1	83708000			36321	13156	24048	24057	41362	41362					0.13610832599169953
LYLSAAVIWPV	11	Unmodified	_LYLSAAVIWPV_					0	0	0		ENSG00000185105|ENST00000409745|MYADML2	ENSG00000185105|ENST00000409745|MYADML2	ENSG00000185105|ENST00000409745|MYADML2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.2427673339844	3	411.241025	1230.70125	3.0375	0.0012491	3.6312	0.0014933	6.6686	0.0027424	411.57688383383635	102.95	0.67481	103.25	103.07	103.74	0.29865					29	20	2	0	0	0	0.70584	1	12556	12556		30.569	2.9249	1	2406800			36322	7681	24049	24058	41363	41363					0.0951232161369262
LYLSEKNRD	9	Unmodified	_LYLSEKNRD_					0	0	0		ENST00000529308.5_2_11:77925304-77925502:+|nuORF	ENST00000529308.5_2_11:77925304-77925502:+|nuORF	ENST00000529308.5_2_11:77925304-77925502:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.3055419921875	2	569.29857	1136.58259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.9	1	114.9	114.4	115.4	0								0	0	0	0.34024	1	11831	11831		17.365	1.7232	1				36323	13320	24050	24059	41364	41364					0.01975922638052907
LYLVIVEKTVN	11	Unmodified	_LYLVIVEKTVN_					0	0	0			REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	REV__nc|ENSG00000184619|Q6ZNG9|KRBA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.8844604492188	2	645.887021	1289.75949	-1.1412	-0.00073708	-3.345	-0.0021605	-4.4862	-0.0028976	645.8847051303749	106.33	1.2879	106.38	106.14	107.43	0.053757					81	30	3	0	0	0	0.7342	1	11302	11302		25.574	4.6271	1	1694400	+		36324	30095	24051	24060	41365	41365					0.1261995846832633
LYLVSVTG	8	Unmodified	_LYLVSVTG_					0	0	0			REV__nc|ENSG00000177058|Q8NBW4-2|SLC38A9	REV__nc|ENSG00000177058|Q8NBW4-2|SLC38A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.24591064453125	2	426.247286	850.48002	-0.1821	-7.7619E-05	-2.626	-0.0011193	-2.8081	-0.0011969	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.82464	1	8908	8908		21.702	1.2205	1	3805200	+		36325	22176	24052	24061	41366	41366					0.04879881637248218
LYMKKSAS	8	Unmodified	_LYMKKSAS_					0	0	0		ENST00000545177.4_1_6:2855770-2876551:-|nuORF;ENST00000420981.2_1_6:2855770-2876648:-|nuORF	ENST00000545177.4_1_6:2855770-2876551:-|nuORF	ENST00000545177.4_1_6:2855770-2876551:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2497253417969	2	464.252046	926.489538	-1.3162	-0.00061105	-2.2135	-0.0010276	-3.5297	-0.0016387	464.2508553442998	59.206	0.74244	59.598	59.191	59.933	0.39179					34	17	3	0	0	0	0.93786	1	6226	6226		53.351	1.0523	1	523950			36326	13574	24053	24062	41367	41367					0.02335326651120795
LYNINFCNVQE	11	Unmodified	_LYNINFCNVQE_					0	0	0			REV__nc|ENSG00000143369|Q16610-2|ECM1	REV__nc|ENSG00000143369|Q16610-2|ECM1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.8809814453125	3	452.879939	1355.61799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.144	1	18.144	17.644	18.644	0								0	0	0	0.56276	1	275	275		23.378	0.81632	1		+		36327	19797	24054	24063	41368	41368					-0.04559782896467368
LYNKGFIY	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))LYNKGFIY_					1	0	0		ENSG00000176853|ENST00000334705|FAM91A1;ENST00000521704.1_1_8:124792721-124796858:+|nuORF	ENSG00000176853|ENST00000334705|FAM91A1	ENSG00000176853|ENST00000334705|FAM91A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2789306640625	2	530.279118	1058.54368	-0.036044	-1.9114E-05	0.35191	0.00018661	0.31586	0.0001675	530.2801983138189	59.193	1.3973	59.179	58.111	59.508	-0.013729					80	45	3	0	0	0	0.73619	1	5421	5421		65.897	8.0862	1	262600			36328	7099	24055	24064	41369	41369					0.01675242074338712
LYNKLLTIY	9	Unmodified	_LYNKLLTIY_					0	0	0			REV__ENST00000560213.1_1_15:99796138-99796378:+|nuORF	REV__ENST00000560213.1_1_15:99796138-99796378:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8390502929688	2	570.8368	1139.65905	0.24304	0.00013874	3.3001	0.0018838	3.5432	0.0020226	570.8387431841412	50.551	0.65606	50.999	50.682	51.338	0.44761					39	15	4	0	0	0	0.78536	1	4999	4999		29.15	3.6994	1	2779100	+		36329	28754	24056	24065	41370	41370					0.09480346205350543
LYNLTFNTL	9	Unmodified	_LYNLTFNTL_					0	0	0			REV__ENST00000508918.5_1_4:16504706-16675844:-|nuORF	REV__ENST00000508918.5_1_4:16504706-16675844:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.7939453125	2	549.795132	1097.57571	0.79655	0.00043794	-1.0438	-0.00057389	-0.24727	-0.00013595	549.7943820553005	82.176	0.70215	82.234	81.986	82.688	0.057976					37	15	4	0	0	0	0.76764	1	8241	8241		34.173	3.8548	1	337840	+		36330	21601	24057	24066	41371	41371					0.03082609757461796
LYPFPSVS	8	Unmodified	_LYPFPSVS_					0	0	0		ENST00000421826.6_2_6:27223302-27223911:+|nuORF	ENST00000421826.6_2_6:27223302-27223911:+|nuORF	ENST00000421826.6_2_6:27223302-27223911:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.24224853515625	2	455.239461	908.46437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.302	1	32.248	31.748	32.748	-0.05434								0	0	0	0.29199	1	1888	1888		29.842	1.5873	1				36331	11472	24058	24067	41372	41372					0.0064759512019918475
LYPGFTKRLFR	11	Unmodified	_LYPGFTKRLFR_					0	0	0		ENSG00000117148|ENST00000375406|ACTL8	ENSG00000117148|ENST00000375406|ACTL8	ENSG00000117148|ENST00000375406|ACTL8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.6078186035156	3	466.60659	1396.79794	-0.99183	-0.00046279	4.1431	0.0019332	3.1513	0.0014704	466.6084303998886	100.17	2.2081	100.39	99.16	101.37	0.21511					171	52	4	0	0	0	0.76892	1	10404	10404		17.833	1.9125	1	609920			36332	2964	24059	24068	41373	41373					0.11541308893492896
LYPVITLG	8	Unmodified	_LYPVITLG_					0	0	0		ENST00000367577.6_2_1:181059582-181059666:+|nuORF	ENST00000367577.6_2_1:181059582-181059666:+|nuORF	ENST00000367577.6_2_1:181059582-181059666:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.76385498046875	2	438.265479	874.516405	-0.29451	-0.00012907	-4.3477	-0.0019054	-4.6422	-0.0020345	438.26353377141464	45.157	0.64037	45.088	44.938	45.579	-0.068634					23	15	2	0	0	0	0.81548	1	3284	3284		20.482	0	1	109570			36333	10557	24060	24069	41374	41374					0.07412758533951092
LYQAFIKEV	9	Unmodified	_LYQAFIKEV_					0	0	0			REV__nc|ENSG00000121892|Q29RF7-3|PDS5A	REV__nc|ENSG00000121892|Q29RF7-3|PDS5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.8134155273438	2	555.813325	1109.6121	-0.27955	-0.00015538	0.20237	0.00011248	-0.077187	-4.2902E-05	555.8133850187799	70.454	1.3646	70.838	70.469	71.834	0.38416					77	32	4	0	0	0	0.47272	1	7850	7850		53.351	3.8154	1	1591600	+		36334	18469	24061	24070	41375	41375					0.061674866541807205
LYQERKMIEES	11	Unmodified	_LYQERKMIEES_					0	0	0		nc|ENSG00000046651|O75665-3|OFD1;ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13771424-13787224:+|nuORF	nc|ENSG00000046651|O75665-3|OFD1	nc|ENSG00000046651|O75665-3|OFD1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.3523864746094	3	475.906265	1424.69697	-1.9159	-0.0009118	-1.0635	-0.00050613	-2.9794	-0.0014179	475.9052694261695	29.618	0.21024	29.618	29.483	29.694	0					11	8	2	0	0	0	0.17586	1	1287	1287		21.78	7.0868	1	26020			36335	952	24062	24071	41376	41376					0.0016044433787101298
LYQERKMIEES	11	Unmodified	_LYQERKMIEES_					0	0	0		nc|ENSG00000046651|O75665-3|OFD1;ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13771424-13787224:+|nuORF	nc|ENSG00000046651|O75665-3|OFD1	nc|ENSG00000046651|O75665-3|OFD1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	475.906265	1424.69697	-0.25064	-0.00011928	-3.5245	-0.0016773	-3.7751	-0.0017966	475.90418976347627	29.602	0.44336	29.559	29.236	29.679	-0.043095	-0.02185	-5.3565E-05	NaN	21.78	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40515			36336	952	24062	24071							0.0016044433787101298
LYQERKMIEES	11	Unmodified	_LYQERKMIEES_					0	0	0		nc|ENSG00000046651|O75665-3|OFD1;ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13771424-13787224:+|nuORF	nc|ENSG00000046651|O75665-3|OFD1	nc|ENSG00000046651|O75665-3|OFD1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	475.906265	1424.69697	-0.53138	-0.00025289	-4.3592	-0.0020746	-4.8906	-0.0023275	475.90417923906233	29.504	0.34752	29.475	29.3	29.647	-0.029207	-0.1057	-0.0012453	NaN	21.78	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56843			36337	952	24062	24071							0.0016044433787101298
LYQERKMIEES	11	Unmodified	_LYQERKMIEES_					0	0	0		nc|ENSG00000046651|O75665-3|OFD1;ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13771424-13787224:+|nuORF	nc|ENSG00000046651|O75665-3|OFD1	nc|ENSG00000046651|O75665-3|OFD1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	475.906265	1424.69697	-0.63508	-0.00030224	-4.0556	-0.0019301	-4.6907	-0.0022323	475.9041894096559	29.761	0.4278	29.672	29.447	29.875	-0.089544	0.091116	-0.00081185	NaN	21.78	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63321			36338	952	24062	24071							0.0016044433787101298
LYQIVKKTN	9	Unmodified	_LYQIVKKTN_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-4|MYH14;REV__ENSG00000100345|ENST00000216181|MYH9;REV__nc|ENSG00000133026|P35580|MYH10	REV__nc|ENSG00000105357|Q7Z406-4|MYH14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.829833984375	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.7932	1	9214	9214		20.947	2.6848	1	6402500	+		36339	17528;17175;19050	24063	24072	41377	41377					0.10094577919835501
LYRLGTLKG	9	Unmodified	_LYRLGTLKG_					0	0	0		nc|ENSG00000010379|Q9NSD5-2|SLC6A13;ENSG00000010379|ENST00000343164|SLC6A13	nc|ENSG00000010379|Q9NSD5-2|SLC6A13	nc|ENSG00000010379|Q9NSD5-2|SLC6A13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8123474121094	2	510.813659	1019.61277	0.94502	0.00048273	-1.9702	-0.0010064	-1.0251	-0.00052365	510.8124794559805	88.963	0.86092	89.413	88.915	89.776	0.45058					43	20	3	0	0	0	0.78536	1	10504	10504		29.15	3.6994	1	941880			36340	768	24064	24073	41378	41378					0.10374326093915442
LYRPPAPR	8	Unmodified	_LYRPPAPR_					0	0	0		ENST00000481448.5_1_21:35897629-35897788:-|nuORF	ENST00000481448.5_1_21:35897629-35897788:-|nuORF	ENST00000481448.5_1_21:35897629-35897788:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2868957519531	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.942	1	78.069	77.569	78.569	0.12695								0	0	0	0.29631	1	7330	7330		25.45	2.4077	1				36341	12459	24065	24074	41379	41379					0.07004903608174118
LYRPRTQRL	9	Unmodified	_LYRPRTQRL_					0	0	0		ENST00000492981.1_1_3:113465783-113465960:-|nuORF	ENST00000492981.1_1_3:113465783-113465960:-|nuORF	ENST00000492981.1_1_3:113465783-113465960:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.8577270507812	2	601.859464	1201.70437	1.0107	0.00060827	-3.917	-0.0023575	-2.9064	-0.0017492	601.8569689467788	103.23	2.1882	103.41	103.08	105.27	0.18297					123	54	4	0	0	0	0.78536	1	10882	10882		29.15	4.6304	1	2928900			36342	12713	24066	24075	41380	41380					0.11159009511061413
LYRPVNNN	8	Unmodified	_LYRPVNNN_					0	0	0			REV__nc|ENSG00000111727|Q9Y5Z7-2|HCFC2	REV__nc|ENSG00000111727|Q9Y5Z7-2|HCFC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2575988769531	2	495.261791	988.509028	-2.6631	-0.0013189	-2.7551	-0.0013645	-5.4182	-0.0026834	495.26028573461133	40.858	1.9733	41.25	40.867	42.841	0.39209					105	53	3	0	0	0	0.88915	1	3494	3494		35.201	6.0512	1	8396000	+		36343	17892	24067	24076	41381	41381					0.014314189862261628
LYRQAAELES	10	Unmodified	_LYRQAAELES_					0	0	0			REV__ENSG00000165807|ENST00000298705|PPP1R36	REV__ENSG00000165807|ENST00000298705|PPP1R36	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.8297729492188	2	590.303852	1178.59315	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.17	1	65.17	64.67	65.67	0								0	0	0	0.45132	1	5749	5749		30.318	2.4355	1		+		36344	21221	24068	24077	41382	41382					0.010999052924944408
LYRQSAMSF	9	Oxidation (M)	_LYRQSAM(Oxidation (M))SF_		LYRQSAM(1)SF		LYRQSAM(59)SF	0	0	1		ENSG00000112379|ENST00000251691|ARFGEF3	ENSG00000112379|ENST00000251691|ARFGEF3	ENSG00000112379|ENST00000251691|ARFGEF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.2693481445312	2	559.768591	1117.52263	0.5211	0.00029169	-1.5048	-0.00084231	-0.98366	-0.00055062	560.2694113681365	49.108	0.72747	50.013	49.686	50.413	0.90424					30	17	2	0	0	0	0.38563	1	4793	4793		58.782	7.4465	1	684970			36345	2661	24069	24078	41383	41383		56			-0.031430912968289704
LYRRGGVLF	9	Unmodified	_LYRRGGVLF_					0	0	0			REV__nc|ENSG00000168481|Q8N145-2|LGI3	REV__nc|ENSG00000168481|Q8N145-2|LGI3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.8180541992188	2	540.819276	1079.624	-0.91455	-0.00049461	-0.26283	-0.00014215	-1.1774	-0.00063675	540.818950152999	56.552	0.73816	56.949	56.676	57.414	0.39672					42	16	3	0	0	0	0.43338	1	5871	5871		55.504	7.5447	1	1732900	+		36346	30016	24070	24079	41384	41384					0.08737148188038191
LYRRTTYFRQY	11	Unmodified	_LYRRTTYFRQY_					0	0	0			REV__nc|ENSG00000069122|Q8IZF2-3|ADGRF5	REV__nc|ENSG00000069122|Q8IZF2-3|ADGRF5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.8208618164062	3	522.944042	1565.8103	4.8474	0.0025349	3.5798	0.001872	8.4271	0.0044069	522.9457862523192	107.77	0.21207	107.89	107.7	107.91	0.11716					15	7	3	0	0	0	0.18216	1	13173	13173		6.001	0	1	383250	+		36347	16575	24071	24080	41385	41385					0.05002300565888618
LYRTPLQAY	9	Unmodified	_LYRTPLQAY_					0	0	0		nc|ENSG00000266412|Q13772-4|NCOA4	nc|ENSG00000266412|Q13772-4|NCOA4	nc|ENSG00000266412|Q13772-4|NCOA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.807373046875	2	562.808574	1123.60259	0.012322	6.9348E-06	-3.837	-0.0021595	-3.8247	-0.0021526	562.8063517571924	34.125	0.55499	34.127	33.872	34.427	0.0026054					18	11	2	0	0	0	0.76764	1	2052	2052		34.173	6.2903	1	69199			36348	15308	24072	24081	41386	41386					0.04573718368669688
LYRWRHQGPRL	11	Unmodified	_LYRWRHQGPRL_					0	0	0		ENST00000483588.2_1_17:16366606-16367262:+|nuORF	ENST00000483588.2_1_17:16366606-16367262:+|nuORF	ENST00000483588.2_1_17:16366606-16367262:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.78045654296875	3	494.612738	1480.81638	-0.42367	-0.00020955	2.1348	0.0010559	1.7111	0.00084635	494.61375308628465	86.051	0.5311	86.495	86.2	86.731	0.44331					19	12	2	0	0	0	0.17729	1	10073	10073		17.833	3.7471	1	71257			36349	12517	24073	24082	41387	41387					0.09520863588068096
LYSIDKSLF	9	Unmodified	_LYSIDKSLF_					0	0	0			REV__ENST00000486925.1_1_7:87505915-87514494:+|nuORF	REV__ENST00000486925.1_1_7:87505915-87514494:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.29833984375	2	543.297507	1084.58046	-0.85759	-0.00046592	0.41443	0.00022516	-0.44316	-0.00024077	543.2977605762965	60.081	0.71462	60.635	60.355	61.07	0.55323					45	19	3	0	0	0	0.10807	1	6396	6396		90.777	0.40684	1	1335100	+		36350	16106	24074	24083	41388	41388					0.04155493900225338
LYSIESGNI	9	Unmodified	_LYSIESGNI_					0	0	0		ENSG00000083857|ENST00000441802|FAT1	ENSG00000083857|ENST00000441802|FAT1	ENSG00000083857|ENST00000441802|FAT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7874755859375	2	498.25584	994.497126	0.87208	0.00043452	-4.3654	-0.0021751	-3.4933	-0.0017406	498.25416091877923	23.388	0.29986	22.814	22.62	22.92	-0.57415					8	6	2	0	0	0	0.20789	1	1025	1025		40.778	0	1	29122			36351	1509	24075	24084	41389	41389					-0.0003424254761057455
LYSILIVKTQE	11	Unmodified	_LYSILIVKTQE_					0	0	0		chr13:35805779-35806474|25|64.96|0.0|22.63|-|0|DCLK1,None|1	chr13:35805779-35806474|25|64.96|0.0|22.63|-|0|DCLK1,None|1	chr13:35805779-35806474|25|64.96|0.0|22.63|-|0|DCLK1,None|1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.25677490234375	3	436.258744	1305.7544	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.278	1	22.22	21.72	22.72	-0.057203								0	0	0	0.56276	1	671	671		34.087	3.5176	1				36352	153	24076	24085	41390	41390					0.113756546057175
LYSLLLGP	8	Unmodified	_LYSLLLGP_					0	0	0			REV__ENSG00000141699|ENST00000309428|RETREG3	REV__ENSG00000141699|ENST00000309428|RETREG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2630920410156	2	438.265479	874.516405	-1.5746	-0.00069011	-4.2502	-0.0018627	-5.8249	-0.0025528	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.87276	1	2869	2869		29.842	0	1	22924000	+		36353	19707	24077	24086	41391	41391					0.07412758533951092
LYSSSNFAK	9	Unmodified	_LYSSSNFAK_					0	0	0			REV__ENSG00000188033|ENST00000311437|ZNF490	REV__ENSG00000188033|ENST00000311437|ZNF490	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.16845703125	2	508.756007	1015.49746	0.14513	7.3838E-05	-3.2047	-0.0016304	-3.0596	-0.0015566	508.7547956041671	53.226	0.16371	53.64	53.54	53.704	0.4139					5	3	2	0	0	0	0.20789	1	5368	5368		51.335	5.3835	1	47137	+		36354	22972	24078	24087	41392	41392					-0.00966822827751912
LYTDVSFPQLL	11	Unmodified	_LYTDVSFPQLL_					0	0	0			REV__ENSG00000139572|ENST00000267015|GPR84	REV__ENSG00000139572|ENST00000267015|GPR84	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59765625	3	432.567578	1294.6809	0.7347	0.00031781	2.1198	0.00091694	2.8545	0.0012348	432.568530760481	106.11	0.31526	106.21	105.99	106.31	0.099007					16	7	3	0	0	0	0.17368	1	11326	11326		35.178	14.863	1	197550	+		36355	19551	24079	24088	41393	41393					0.04535106163234559
LYTLIITCL	9	Unmodified	_LYTLIITCL_					0	0	0			REV__nc|ENSG00000112337|O00624-2|SLC17A2	REV__nc|ENSG00000112337|O00624-2|SLC17A2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	527.3070068359375	2	526.806654	1051.59875	-1.5277	-0.0008048	3.9182	0.0020641	2.3905	0.0012593	526.8083440791663	100.14	0.66196	100.31	99.884	100.55	0.172					46	14	4	0	0	0	0.20789	1	10345	10345		18.324	14.339	1	992680	+		36356	17942	24080	24089	41394	41394					0.07501912550583256
LYTLSTLLSKL	11	Unmodified	_LYTLSTLLSKL_					0	0	0			REV__ENST00000355315.7_2_8:57130481-57130601:+|nuORF	REV__ENST00000355315.7_2_8:57130481-57130601:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3810424804688	2	626.381571	1250.74859	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.96	1	115.89	115.39	116.39	-0.069672								0	0	0	0.56276	1	12444	12444		18.262	0	1		+		36357	25374	24081	24090	41395	41395					0.13324556094039508
LYTPGTLLL	9	Unmodified	_LYTPGTLLL_					0	0	0			REV__ENST00000442856.1_1_16:79338-84879:-|nuORF;REV__nc|ENSG00000292373|Q01113-3|IL9R	REV__ENST00000442856.1_1_16:79338-84879:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.7961730957031	2	495.797143	989.579734	1.3672	0.00067785	-1.0952	-0.000543	0.27199	0.00013485	495.79626399989235	105.14	1.0402	105.29	104.99	106.03	0.15583					65	26	4	0	0	0	0.39977	1	12788	12788		57.811	11.859	1	604160	+		36358	18580;30306	24082	24091	41396	41396					0.08452699251199647
LYTPGTLLL	9	Unmodified	_LYTPGTLLL_					0	0	0			REV__ENST00000442856.1_1_16:79338-84879:-|nuORF;REV__nc|ENSG00000292373|Q01113-3|IL9R	REV__ENST00000442856.1_1_16:79338-84879:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.79644775390625	2	495.797143	989.579734	3.6416	0.0018055	-3.7269	-0.0018478	-0.085301	-4.2292E-05	495.7951678077777	105.11	0.93385	105.34	105.01	105.95	0.2268					55	22	3	0	0	0	0.39977	1	12830	12830		57.811	2.3071	1	568440	+		36359	18580;30306	24082	24091	41397	41397					0.08452699251199647
LYTTVQTLF	9	Unmodified	_LYTTVQTLF_					0	0	0			REV__ENSG00000187823|ENST00000695839|RTL4	REV__ENSG00000187823|ENST00000695839|RTL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.296630859375	2	543.297507	1084.58046	-1.4063	-0.00076406	0.86028	0.00046739	-0.54606	-0.00029667	543.2978497251211	60.216	0.72805	60.607	60.373	61.101	0.39077					48	20	3	0	0	0	0.07589	1	6391	6391		98.629	8.2596	1	1233800	+		36360	22954	24083	24092	41398	41398					0.04155493900225338
LYTVIVLGNLL	11	Unmodified	_LYTVIVLGNLL_					0	0	0		ENSG00000176281|ENST00000315915|OR4K5	ENSG00000176281|ENST00000315915|OR4K5	ENSG00000176281|ENST00000315915|OR4K5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.587646484375	3	406.588313	1216.74311	0.5758	0.00023411	-2.1697	-0.00088218	-1.5939	-0.00064807	406.5873508642622	24.247	1.5285	24.302	23.869	25.398	0.055485					100	43	4	0	0	0	0.74405	1	922	922		23.378	0	1	404210			36361	7070	24084	24093	41399	41399					0.14340877302220179
LYTVVSTT	8	Unmodified	_LYTVVSTT_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2417297363281	2	442.242201	882.469849	0.39969	0.00017676	-3.2024	-0.0014162	-2.8027	-0.0012395	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.93529	1	8521	8521		52.299	15.14	1	1238700	+		36362	23025	24085	24094	41400	41400					0.023912739119850812
LYTVVSTT	8	Unmodified	_LYTVVSTT_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24072265625	2	442.242201	882.469849	-1.5813	-0.00069932	-1.2676	-0.00056057	-2.8489	-0.0012599	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.92973	1	7763	7763		50.025	12.996	1	968500	+		36363	23025	24085	24094	41401	41401					0.023912739119850812
LYTVVSTT	8	Unmodified	_LYTVVSTT_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2408447265625	2	442.242201	882.469849	0.21245	9.3954E-05	-3.1782	-0.0014055	-2.9657	-0.0013116	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.884	1	9400	9400		33.516	0.022601	1	1030200	+		36364	23025	24085	24094	41402	41402					0.023912739119850812
LYTYRLQFKWK	11	Unmodified	_LYTYRLQFKWK_					0	0	0			REV__ENST00000342992.10_3_2:179400465-179400825:-|nuORF	REV__ENST00000342992.10_3_2:179400465-179400825:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.291015625	3	515.9574	1544.85037	1.2385	0.000639	-1.3083	-0.00067503	-0.069822	-3.6025E-05	515.9566300743505	89.446	0.61368	89.896	89.571	90.184	0.45058					50	14	4	0	0	0	0.77511	1	10546	10546		16.53	2.4438	1	1441700	+		36365	25284	24086	24095	41403	41403					0.09973847236415168
LYVGIAVGVVA	11	Unmodified	_LYVGIAVGVVA_					0	0	0		ENSG00000143167|ENST00000367868|GPA33	ENSG00000143167|ENST00000367868|GPA33	ENSG00000143167|ENST00000367868|GPA33	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8224487304688	2	530.823692	1059.63283	-0.88248	-0.00046844	-3.9714	-0.0021081	-4.8539	-0.0025765	530.821384723199	80.761	1.5978	80.761	80.141	81.738	0					159	57	4	0	0	0	0.74035	1	7536	7536		24.203	4.206	1	2196600			36366	4608	24087	24096	41404	41404					0.10540077033874695
LYVTIIPG	8	Unmodified	_LYVTIIPG_					0	0	0			REV__ENSG00000197309|ENST00000641351|OR10D3	REV__ENSG00000197309|ENST00000641351|OR10D3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2635498046875	2	438.265479	874.516405	-1.5746	-0.00069011	-4.2502	-0.0018627	-5.8249	-0.0025528	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.87276	1	2877	2877		29.842	1.5873	1	22924000	+		36367	23218	24088	24097	41405	41405					0.07412758533951092
LYVVMVLPSVI	11	Unmodified	_LYVVMVLPSVI_					0	0	0		nc|ENSG00000186575|P35240-2|NF2	nc|ENSG00000186575|P35240-2|NF2	nc|ENSG00000186575|P35240-2|NF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.583984375	3	411.582282	1231.72502	1.0715	0.00044102	3.6645	0.0015082	4.736	0.0019492	411.58372332792885	25.568	2.1598	25.311	24.774	26.934	-0.25721					112	48	3	0	0	0	0.70623	1	1375	1375		32.751	6.0008	1	1250200			36368	15160	24089	24098	41406	41406					0.11842419055869868
LYWASSATF	9	Unmodified	_LYWASSATF_					0	0	0			REV__nc|ENSG00000204209|Q9UER7-5|DAXX	REV__nc|ENSG00000204209|Q9UER7-5|DAXX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.249267578125	2	523.2531	1044.49165	-0.31778	-0.00016628	-3.3173	-0.0017358	-3.635	-0.001902	523.2512121909256	46.685	1.2657	47.157	46.856	48.121	0.47139					47	30	2	0	0	0	0.28875	2	4437	4437;4449		65.803	16.267	1	2250000	+		36369	30159	24090	24099	41407;41408	41407					-0.028819213394399412
LYWIIFKHRKR	11	Unmodified	_LYWIIFKHRKR_					0	0	0		ENST00000294997.10_1_1:207888693-207911758:+|nuORF	ENST00000294997.10_1_1:207888693-207911758:+|nuORF	ENST00000294997.10_1_1:207888693-207911758:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	520.6488647460938	3	520.6489	1558.92487	-0.042901	-2.2336E-05	1.7573	0.00091495	1.7144	0.00089261	520.9841774153862	108.42	1.2085	108.38	108.01	109.22	-0.042404					82	50	2	0	0	0	0.81021	1	11877	11877		9.2118	3.2108	1	1349000			36370	9710	24091	24100	41409	41409					0.16776654838486138
LYWIIFKHRKR	11	Unmodified	_LYWIIFKHRKR_					0	0	0		ENST00000294997.10_1_1:207888693-207911758:+|nuORF	ENST00000294997.10_1_1:207888693-207911758:+|nuORF	ENST00000294997.10_1_1:207888693-207911758:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	520.6497802734375	3	520.6489	1558.92487	1.2139	0.00063203	0.35382	0.00018422	1.5678	0.00081625	520.6490023902913	107.88	0.27791	107.92	107.69	107.97	0.035622					27	6	6	0	0	0	0.76251	1	11862	11862		19.263	6.8298	1	157420000			36371	9710	24091	24100	41410	41410					0.16776654838486138
LYWIIFKHRKR	11	Unmodified	_LYWIIFKHRKR_					0	0	0		ENST00000294997.10_1_1:207888693-207911758:+|nuORF	ENST00000294997.10_1_1:207888693-207911758:+|nuORF	ENST00000294997.10_1_1:207888693-207911758:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	520.6507568359375	3	520.6489	1558.92487	-1.5478	-0.00080584	3.3247	0.001731	1.7769	0.00092514	520.6505941680612	108.98	0.48762	109	108.81	109.3	0.020561					43	24	2	0	0	0	0.8498	1	11623	11623		6.001	0.30226	1	1655000			36372	9710	24091	24100	41411	41411					0.16776654838486138
LYYEHSSE	8	Unmodified	_LYYEHSSE_					0	0	0			REV__ENSG00000083857|ENST00000441802|FAT1	REV__ENSG00000083857|ENST00000441802|FAT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.2195434570312	2	514.221997	1026.42944	-1.709	-0.0008788	-2.1918	-0.0011271	-3.9008	-0.0020059	514.2207442821898	29.985	0.6973	29.985	29.672	30.369	0					57	22	3	0	0	0	0.90465	1	1350	1350		40.573	1.3198	1	371510	+		36373	16864	24092	24101	41412	41412					-0.08271692478410841
LYYILHPN	8	Unmodified	_LYYILHPN_					0	0	0		nc|ENSG00000102780|Q86XP1-5|DGKH;nc|ENSG00000102780|Q86XP1-3|DGKH;nc|ENSG00000102780|Q86XP1-2|DGKH;ENSG00000102780|ENST00000337343|DGKH	nc|ENSG00000102780|Q86XP1-5|DGKH	nc|ENSG00000102780|Q86XP1-5|DGKH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.29248046875	2	516.779285	1031.54402	1.2614	0.00065186	-2.1093	-0.0010901	-0.84794	-0.0004382	517.2808210154282	89.406	0.50162	89.857	89.611	90.113	0.45058					24	11	3	0	0	0	0.4196	1	10581	10581		20.482	0	1	105490			36374	2017	24093	24102	41413	41413					0.029506617941933655
LYYYLFTY	8	Unmodified	_LYYYLFTY_					0	0	0		ENST00000390340.2_1_7:38331389-38331587:-|nuORF	ENST00000390340.2_1_7:38331389-38331587:-|nuORF	ENST00000390340.2_1_7:38331389-38331587:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.2791748046875	2	573.281326	1144.5481	0.5512	0.00031599	-3.6301	-0.0020811	-3.0789	-0.0017651	573.2791218710266	80.66	0.7316	80.797	80.448	81.18	0.13702					39	17	3	0	0	0	0.92774	1	7712	7712		49.211	4.8336	1	266470			36375	10995	24094	24103	41414	41414					-0.01839293502757755
LYYYLVCD	8	Unmodified	_LYYYLVCD_					0	0	0			REV__nc|ENSG00000141027|O75376-2|NCOR1	REV__nc|ENSG00000141027|O75376-2|NCOR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2417602539062	2	526.243886	1050.47322	0.18829	9.9087E-05	-4.4083	-0.0023198	-4.22	-0.0022208	526.2412314877313	74.357	2.6099	74.748	74.081	76.691	0.3911					105	62	3	0	0	0	0.94132	1	8370	8370		54.765	7.9982	1	679770	+		36376	19657	24095	24104	41415	41415					-0.049997993056422274
MAAAFFNTPE	10	Unmodified	_MAAAFFNTPE_					0	0	0		nc|ENSG00000103249|P51798-2|CLCN7;ENSG00000103249|ENST00000382745|CLCN7;ENST00000563642.6_1_16:1500458-1501741:-|nuORF	nc|ENSG00000103249|P51798-2|CLCN7	nc|ENSG00000103249|P51798-2|CLCN7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.7492065429688	2	549.749867	1097.48518	0.27504	0.0001512	-3.7432	-0.0020578	-3.4682	-0.0019066	549.7476357023818	36.848	0.64654	36.947	36.637	37.283	0.099277					36	16	3	0	0	0	0.54701	1	2051	2051		52.937	5.0211	1	640410			36377	2068	24096	24105	41416	41416					-0.05966182562428912
MAAATPENIV	10	Unmodified	_MAAATPENIV_					0	0	0			REV__ENSG00000155304|ENST00000285667|HSPA13	REV__ENSG00000155304|ENST00000285667|HSPA13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7557373046875	2	508.757692	1015.50083	0.50051	0.00025464	-3.4289	-0.0017445	-2.9284	-0.0014899	508.75579424873774	69.849	0.77033	70.395	70.072	70.843	0.54693					35	20	2	0	0	0	0.82886	1	7763	7763		37.812	0.78304	1	509660	+		36378	20422	24097	24106	41417	41417					-0.00629896045404621
MADLRILV	8	Unmodified	_MADLRILV_					0	0	0		CON__Q2KIT0	CON__Q2KIT0	CON__Q2KIT0	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2252502441406	2	465.775688	929.536823	-0.49989	-0.00023284	4.4432	0.0020695	3.9433	0.0018367	465.7777288970689	80.069	2.1587	80.485	79.063	81.221	0.41621					86	50	2	0	0	0	0.4196	1	9064	9064		55.504	4.1688	1	282320		+	36379	612	24098	24107	41418	41418					0.06923605922122533
MADPRGGFM	9	Unmodified	_MADPRGGFM_					0	0	0		ENST00000261778.1_1_16:69117615-69117759:+|nuORF	ENST00000261778.1_1_16:69117615-69117759:+|nuORF	ENST00000261778.1_1_16:69117615-69117759:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2167663574219	2	491.21768	980.420807	-1.2074	-0.00059309	0.34977	0.00017182	-0.85761	-0.00042127	491.217698034564	29.055	1.2056	29.026	28.57	29.775	-0.029207					62	27	3	0	0	0	0.69624	1	1798	1798		40.778	2.9666	1	361790			36380	9414	24099	24108	41419	41419					-0.07018660920232378
MAEESSMD	8	Unmodified	_MAEESSMD_					0	0	0		nc|ENSG00000005436|P16383-3|GCFC2	nc|ENSG00000005436|P16383-3|GCFC2	nc|ENSG00000005436|P16383-3|GCFC2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2742004394531	2	450.159693	898.304834	0.68237	0.00030718	3.3182	0.0014937	4.0006	0.0018009	450.1615066688457	92.913	0.16069	93.071	92.959	93.12	0.15875					5	3	2	0	0	0	0.4196	1	9421	9421		18.324	0	1	21293			36381	14731	24100	24109	41420	41420					-0.1483864928161438
MAEKAKRKEY	10	Unmodified	_MAEKAKRKEY_					0	0	0			REV__nc|ENSG00000142621|B1AJZ9-4|FHAD1	REV__nc|ENSG00000142621|B1AJZ9-4|FHAD1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3331909179688	2	627.337172	1252.65979	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.269	1	55.36	54.86	55.86	0.091167								0	0	0	0.45132	1	4620	4620		28.081	1.0342	1		+		36382	19749	24101	24110	41421	41421					0.04356817582743133
MAEKFDNIHL	10	Unmodified	_MAEKFDNIHL_					0	0	0			REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.5399169921875	3	406.537624	1216.59104	0.11706	4.759E-05	3.4486	0.001402	3.5657	0.0014496	406.53896859054584	30.489	0.56195	30.487	30.29	30.852	-0.0022526					59	27	3	0	0	0	0.86742	1	1345	1345		27.644	1.7522	1	224080	+		36383	16702	24102	24111	41422	41422					-0.008588467169829528
MAELLPLVSA	10	Oxidation (M)	_M(Oxidation (M))AELLPLVSA_		M(1)AELLPLVSA		M(44)AELLPLVSA	0	0	1		ENSG00000162062|ENST00000361837|TEDC2;ENST00000569496.5_1_16:2514507-2514666:+|nuORF;nc|ENSG00000162062|Q7L2K0-2|TEDC2	ENSG00000162062|ENST00000361837|TEDC2	ENSG00000162062|ENST00000361837|TEDC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2937622070312	2	530.291368	1058.56818	-0.034361	-1.8221E-05	3.9342	0.0020863	3.8998	0.002068	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.71042	1	9354	9354		44.117	11.304	1	1852900			36384	5665	24103	24112	41423	41423		99			0.04124134165522264
MAFNFVVVVAA	11	Unmodified	_MAFNFVVVVAA_					0	0	0			REV__nc|ENSG00000185920|Q13635-2|PTCH1	REV__nc|ENSG00000185920|Q13635-2|PTCH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.3161010742188	2	584.315177	1166.6158	-1.3681	-0.00079938	3.6952	0.0021591	2.3271	0.0013598	584.3174338604485	68.742	0.43665	68.775	68.537	68.974	0.033005					27	15	2	0	0	0	0.68378	1	6579	6579		34.173	6.0911	1	94400	+		36385	30103	24104	24113	41424	41424					0.03915833156406734
MAFNHLIPG	9	Unmodified	_MAFNHLIPG_					0	0	0		nc|ENSG00000135903|P23760-4|PAX3;nc|ENSG00000135903|P23760-5|PAX3;nc|ENSG00000135903|P23760|PAX3;nc|ENSG00000135903|P23760-6|PAX3;ENSG00000135903|ENST00000392070|PAX3;nc|ENSG00000135903|P23760-8|PAX3	nc|ENSG00000135903|P23760-4|PAX3	nc|ENSG00000135903|P23760-4|PAX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.2568359375	2	500.257662	998.500772	0.063706	3.1869E-05	-1.7368	-0.00086883	-1.6731	-0.00083696	500.25660582831534	52.55	0.86823	53.164	52.828	53.696	0.61436					41	20	3	0	0	0	0.5393	1	5283	5283		50.025	0.58299	1	1126100			36386	4061	24105	24114	41425	41425					0.001461487452502297
MAFRIPENY	9	Unmodified	_MAFRIPENY_					0	0	0			REV__ENST00000358273.8_2_17:29701267-29701405:+|nuORF	REV__ENST00000358273.8_2_17:29701267-29701405:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.781982421875	2	570.778959	1139.54336	-0.36907	-0.00021066	2.6772	0.0015281	2.3082	0.0013174	570.7803128361679	24.518	0.87242	24.574	24.135	25.007	0.055485					44	22	3	0	0	0	0.67345	1	891	891		42.396	0	1	98944	+		36387	25430	24106	24115	41426	41426					-0.02082500917163088
MAFRKISLKT	10	Unmodified	_MAFRKISLKT_					0	0	0		ENSG00000164603|ENST00000297145|BMT2	ENSG00000164603|ENST00000297145|BMT2	ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8567504882812	2	597.855001	1193.69545	-0.43134	-0.00025788	2.6383	0.0015773	2.207	0.0013195	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.8608	1	10116	10116		34.173	0.25091	1	6857100			36388	5978	24107	24116	41427	41427					0.10634899830392897
MAGLELLSDQ	10	Unmodified	_MAGLELLSDQ_					0	0	0		ENSG00000178896|ENST00000316052|EXOSC4	ENSG00000178896|ENST00000316052|EXOSC4	ENSG00000178896|ENST00000316052|EXOSC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7672119140625	2	538.768257	1075.52196	-1.4978	-0.00080696	-0.47181	-0.00025419	-1.9696	-0.0010612	538.7675993359869	44.594	0.6071	45.438	45.184	45.791	0.84438					30	14	3	0	0	0	0.30722	1	4109	4109		71.877	17.101	1	1867500			36389	7229	24108	24117	41428	41428					-0.012779307365462955
MAGNLNKKH	9	Unmodified	_MAGNLNKKH_					0	0	0		ENSG00000154415|ENST00000284601|PPP1R3A	ENSG00000154415|ENST00000284601|PPP1R3A	ENSG00000154415|ENST00000284601|PPP1R3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.7715759277344	2	506.771468	1011.52838	0.44707	0.00022656	-0.51134	-0.00025913	-0.064268	-3.2569E-05	506.7710645190267	17.038	0.48114	16.555	16.417	16.898	-0.48256					17	10	2	0	0	0	0.62081	1	205	205		45.952	0	1	388760			36390	5276	24109	24118	41429	41429					0.023080520054918452
MAGNLNKKH	9	Unmodified	_MAGNLNKKH_					0	0	0		ENSG00000154415|ENST00000284601|PPP1R3A	ENSG00000154415|ENST00000284601|PPP1R3A	ENSG00000154415|ENST00000284601|PPP1R3A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	506.771468	1011.52838	1.1214	0.00056832	-1.1473	-0.00058144	-0.025899	-1.3125E-05	506.7707191861358	17.062	0.4468	16.452	16.305	16.752	-0.6107	-0.05182	-0.00041386	NaN	45.952	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	455090			36391	5276	24109	24118							0.023080520054918452
MAGPGPGAVLE	11	Oxidation (M)	_M(Oxidation (M))AGPGPGAVLE_		M(1)AGPGPGAVLE		M(61)AGPGPGAVLE	0	0	1		ENSG00000126107|ENST00000372172|HECTD3	ENSG00000126107|ENST00000372172|HECTD3	ENSG00000126107|ENST00000372172|HECTD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7478332519531	2	507.749867	1013.48518	0.40656	0.00020643	-3.6857	-0.0018714	-3.2791	-0.001665	507.74793400391223	54.816	1.258	55.223	54.488	55.746	0.40663					71	29	3	0	0	0	0.37938	1	5539	5539		60.972	9.6365	1	2389700			36392	3442	24110	24119	41430	41430		66			-0.02102182562452981
MAGSLTPCLYK	11	Carbamidomethyl (C)	_MAGSLTPC(Carbamidomethyl (C))LYK_	MAGSLTPC(1)LYK		MAGSLTPC(43)LYK		0	1	0		ENSG00000064835|ENST00000350375|POU1F1;nc|ENSG00000064835|P28069-2|POU1F1	ENSG00000064835|ENST00000350375|POU1F1	ENSG00000064835|ENST00000350375|POU1F1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.8096923828125	2	620.806859	1239.59917	0.1525	9.4673E-05	2.2698	0.0014091	2.4223	0.0015038	620.8084857499598	59.522	1.8774	60.075	59.343	61.22	0.55323					109	49	4	0	0	0	0.61369	1	6257	6257		42.864	6.4175	1	3699000			36393	1112	24111	24120	41431	41431	14				-0.011050357918747977
MAHGDHFFVC	10	Unmodified	_MAHGDHFFVC_					0	0	0		ENST00000400000.6_1_18:9954292-9954346:+|nuORF	ENST00000400000.6_1_18:9954292-9954346:+|nuORF	ENST00000400000.6_1_18:9954292-9954346:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533325195312	2	582.241686	1162.46882	0.16577	9.652E-05	-0.23531	-0.00013701	-0.069537	-4.0487E-05	582.2434335922463	103.46	0.19366	103.5	103.4	103.59	0.041481					8	4	3	0	0	0	0.37624	1	11220	11220		30.504	0	1	126100			36394	11216	24112	24121	41432	41432					-0.10591587000203617
MAILQLKN	8	Unmodified	_MAILQLKN_					0	0	0			REV__nc|ENSG00000144285|P35498-3|SCN1A	REV__nc|ENSG00000144285|P35498-3|SCN1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774353027344	2	465.775688	929.536823	0.52254	0.00024339	3.4867	0.001624	4.0093	0.0018674	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.88915	3	8271	8271;8301;8467		37.028	9.1462	1	1330400	+		36395	19879	24113	24122	41433;41434;41435	41433					0.06923605922111165
MAILQLKN	8	Unmodified	_MAILQLKN_					0	0	0			REV__nc|ENSG00000144285|P35498-3|SCN1A	REV__nc|ENSG00000144285|P35498-3|SCN1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774353027344	2	465.775688	929.536823	-0.25577	-0.00011913	4.2902	0.0019982	4.0344	0.0018791	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.86791	2	7843	7843;7917		37.028	2.8559	1	451640	+		36396	19879	24113	24122	41436;41437	41436					0.06923605922111165
MAILQLKN	8	Unmodified	_MAILQLKN_					0	0	0			REV__nc|ENSG00000144285|P35498-3|SCN1A	REV__nc|ENSG00000144285|P35498-3|SCN1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7773742675781	2	465.775688	929.536823	-0.087401	-4.0709E-05	4.1075	0.0019132	4.0201	0.0018725	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.87276	2	8191	8120;8191		44.531	9.3304	1	1330000	+		36397	19879	24113	24122	41438;41439	41439					0.06923605922111165
MAILQLKN	8	Unmodified	_MAILQLKN_					0	0	0			REV__nc|ENSG00000144285|P35498-3|SCN1A	REV__nc|ENSG00000144285|P35498-3|SCN1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7774963378906	2	465.775688	929.536823	0.60386	0.00028126	3.3703	0.0015698	3.9742	0.0018511	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.88915	1	7849	7849		35.201	1.6851	1	1082300	+		36398	19879	24113	24122	41440	41440					0.06923605922111165
MAKILVAEGT	10	Unmodified	_MAKILVAEGT_					0	0	0		ENSG00000150768|ENST00000280346|DLAT;ENST00000533297.1_1_11:111896132-111933256:+|nuORF	ENSG00000150768|ENST00000280346|DLAT	ENSG00000150768|ENST00000280346|DLAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.79296875	2	516.791535	1031.56852	0.70992	0.00036688	3.0022	0.0015515	3.7121	0.0019184	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.86763	1	8698	8698		26.693	1.1189	1	842420			36399	5084	24114	24123	41441	41441					0.05399553885399655
MAKKGYTG	8	Unmodified	_MAKKGYTG_					0	0	0			REV__ENST00000382990.1_1_16:281340-281454:+|nuORF	REV__ENST00000382990.1_1_16:281340-281454:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2616882324219	2	428.223288	854.432024	-0.17885	-7.6586E-05	-1.6105	-0.00068967	-1.7894	-0.00076626	428.22271812345895	91.019	0.31367	91.089	90.804	91.118	0.069328					14	7	3	0	0	0	0.4196	1	9351	9351		44.117	5.3107	1	140030	+		36400	25983	24115	24124	41442	41442					-0.001015155544450863
MAKVFMLP	8	Unmodified	_MAKVFMLP_					0	0	0		nc|ENSG00000126903|P09131-2|SLC10A3;ENSG00000126903|ENST00000651600|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	nc|ENSG00000126903|P09131-2|SLC10A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.75421142578125	2	468.75591	935.497266	-0.11471	-5.3772E-05	-3.4044	-0.0015958	-3.5191	-0.0016496	468.75412070279606	21.769	0.39813	21.712	21.542	21.94	-0.057203					25	14	2	0	0	0	0.92176	1	630	630		46.766	14.812	1	61732			36401	3479	24116	24125	41443	41443					0.026937626470271425
MALALRGVPV	10	Unmodified	_MALALRGVPV_					0	0	0			REV__ENST00000371079.5_1_1:64644296-64644326:+|nuORF	REV__ENST00000371079.5_1_1:64644296-64644326:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8087158203125	2	513.810062	1025.60557	0.97986	0.00050346	-3.151	-0.001619	-2.1711	-0.0011156	513.8083435529123	49.803	1.6726	50.648	49.911	51.584	0.84501					82	40	3	0	0	0	0.85694	1	4905	4905		21.96	1.013	1	1233800	+		36402	25678	24117	24126	41444	41444					0.09379270221825209
MALASVKK	8	Unmodified	_MALASVKK_					0	0	0		ENST00000374279.3_1_9:114695413-114695467:+|nuORF	ENST00000374279.3_1_9:114695413-114695467:+|nuORF	ENST00000374279.3_1_9:114695413-114695467:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.3068542480469	2	424.257131	846.499709	1.0011	0.00042472	-0.32605	-0.00013833	0.67504	0.00028639	424.25683681697194	20.674	0.75672	20.215	19.823	20.58	-0.4591					19	17	2	0	0	0	0.4196	1	633	633		28.254	1.4582	1	33513			36403	10773	24118	24127	41445	41445					0.07031934376357185
MALFLLPCLL	10	Unmodified	_MALFLLPCLL_					0	0	0		nc|ENSG00000183629|P0DX53-4|GOLGA8G	nc|ENSG00000183629|P0DX53-4|GOLGA8G	nc|ENSG00000183629|P0DX53-4|GOLGA8G	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3265380859375	2	567.326699	1132.63885	1.497	0.00084932	3.9124	0.0022196	5.4094	0.0030689	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.86786	1	10148	10148		26.796	2.2769	1	15259000			36404	15143	24119	24128	41446	41446					0.07783135949512143
MALHLPTG	8	Unmodified	_MALHLPTG_					0	0	0			REV__nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1	REV__nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2276306152344	2	420.225831	838.437109	2.4843	0.001044	2.4469	0.0010283	4.9312	0.0020722	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.90024	1	7681	7681		39.021	4.849	1	961790	+		36405	22700	24120	24129	41447	41447					0.01142788308152376
MALLLPAATT	10	Unmodified	_MALLLPAATT_					0	0	0			REV__nc|ENSG00000134324|Q14693|LPIN1	REV__nc|ENSG00000134324|Q14693|LPIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2911682128906	2	501.288628	1000.5627	0.65623	0.00032896	2.7707	0.0013889	3.4269	0.0017179	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.86452	1	8355	8355		30.504	1.3541	1	2931000	+		36406	19135	24121	24130	41448	41448					0.06244455373712299
MALRGLLV	8	Unmodified	_MALRGLLV_					0	0	0		ENST00000257572.5_1_12:117298148-117298622:-|nuORF	ENST00000257572.5_1_12:117298148-117298622:-|nuORF	ENST00000257572.5_1_12:117298148-117298622:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.7737121582031	2	436.772948	871.531344	-0.76279	-0.00033317	2.3111	0.0010094	1.5483	0.00067627	436.773961366412	27.779	2.36	27.682	26.915	29.275	-0.096947					107	54	4	0	0	0	0.82419	1	1661	1661		13.775	0	1	1192900			36407	9354	24122	24131	41449	41449					0.09043927130301199
MALVFVYG	8	Unmodified	_MALVFVYG_					0	0	0		ENSG00000134864|ENST00000683975|GGACT	ENSG00000134864|ENST00000683975|GGACT	ENSG00000134864|ENST00000683975|GGACT	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2742614746094	2	450.238407	898.462261	-1.7764	-0.00079982	-1.1445	-0.00051529	-2.9209	-0.0013151	450.23755947470084	92.895	0.41271	93.088	92.735	93.147	0.19239					14	9	3	0	0	0	0.4196	1	9357	9357		43.626	13.122	1	167100			36408	3964	24123	24132	41450	41450					0.008968431107405195
MALVKPIITAH	11	Unmodified	_MALVKPIITAH_					0	0	0			REV__ENSG00000105568|ENST00000322088|PPP2R1A	REV__ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.3633422851562	2	597.357376	1192.7002	-0.56757	-0.00033904	2.1985	0.0013133	1.6309	0.00097423	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.6921	1	10782	10782		32.812	2.4947	1	3951300	+		36409	17552	24124	24133	41451	41451					0.11155783973163125
MALVKPIITAH	11	Unmodified	_MALVKPIITAH_					0	0	0			REV__ENSG00000105568|ENST00000322088|PPP2R1A	REV__ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.3589477539062	2	597.357376	1192.7002	0.94282	0.0005632	0.30511	0.00018226	1.2479	0.00074546	597.3571269689473	100.1	2.8225	100.31	99.04	101.86	0.21512					167	67	4	0	0	0	0.64498	1	10466	10466		39.253	0	1	2588300	+		36410	17552	24124	24133	41452	41452					0.11155783973163125
MALVLGLPSG	10	Unmodified	_MALVLGLPSG_					0	0	0			REV__nc|ENSG00000091622|Q9BZ71-3|PITPNM3	REV__nc|ENSG00000091622|Q9BZ71-3|PITPNM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2774963378906	2	479.275521	956.536489	-0.098426	-4.7173E-05	3.9538	0.001895	3.8554	0.0018478	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.81018	1	8221	8221		38.806	5.9937	1	1929800	+		36411	17020	24125	24134	41453	41453					0.0564818620226788
MALVPSGRA	9	Unmodified	_MALVPSGRA_					0	0	0			REV__nc|ENSG00000072195|Q15772-1|SPEG	REV__nc|ENSG00000072195|Q15772-1|SPEG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.24468994140625	2	451.249837	900.485122	-1.0589	-0.00047784	-1.4176	-0.0006397	-2.4766	-0.0011175	451.2490578408484	67.679	1.2813	67.739	67.313	68.595	0.059288					106	47	3	0	0	0	0.76764	1	5994	5994		34.173	5.9183	1	166740	+		36412	16641	24126	24135	41454	41454					0.03089862228216589
MALVWKRK	8	Unmodified	_MALVWKRK_					0	0	0			REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3138427734375	2	516.312772	1030.61099	0.876	0.00045229	1.1092	0.00057271	1.9852	0.001025	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.86791	1	10552	10552		28.254	2.6802	1	67025000	+		36413	30043	24127	24136	41455	41455					0.09690993804292702
MALWCATDH	9	Unmodified	_MALWCATDH_					0	0	0		ENSG00000167123|ENST00000372838|CERCAM	ENSG00000167123|ENST00000372838|CERCAM	ENSG00000167123|ENST00000372838|CERCAM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2691040039062	2	524.222962	1046.43137	-0.51967	-0.00027242	0.20168	0.00010573	-0.31799	-0.0001667	524.2230840459005	30.745	0.3554	30.815	30.58	30.935	0.069654					11	7	2	0	0	0	0.20789	1	2007	2007		17.365	0	1	42368			36414	6270	24128	24137	41456	41456					-0.08998678265811577
MAMEDEFDP	9	Unmodified	_MAMEDEFDP_					0	0	0		chr16:23581173-23585336|38|29.53|0.61|5.59|-|2|NDUFAB1,NDUFAB1|1	chr16:23581173-23585336|38|29.53|0.61|5.59|-|2|NDUFAB1,NDUFAB1|1	chr16:23581173-23585336|38|29.53|0.61|5.59|-|2|NDUFAB1,NDUFAB1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.278076171875	2	542.701725	1083.3889	-0.12465	-6.765E-05	0.6624	0.00035948	0.53774	0.00029183	543.2029446190329	63.108	0.12915	63.662	63.555	63.684	0.55449					4	2	2	0	0	0	0.20789	1	6786	6786		37.159	0	1	76528			36415	201	24129	24138	41457	41457					-0.14946118184707302
MAMVHHVLY	9	Unmodified	_MAMVHHVLY_					0	0	0			REV__nc|ENSG00000160606|Q96CP7-2|TLCD1	REV__nc|ENSG00000160606|Q96CP7-2|TLCD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.7725830078125	2	550.772622	1099.53069	-0.19023	-0.00010477	-1.0198	-0.0005617	-1.2101	-0.00066647	550.7718672682902	66.199	1.1831	66.226	65.995	67.179	0.027321					126	60	4	0	0	0	0.72098	1	6316	6316		39.021	0.21535	1	1485600	+		36416	20727	24130	24139	41458	41458					-0.015092355810338631
MAPPKIVGG	9	Unmodified	_MAPPKIVGG_					0	0	0			REV__ENSG00000162851|ENST00000366514|TFB2M	REV__ENSG00000162851|ENST00000366514|TFB2M	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2513427734375	2	435.249306	868.484059	1.6099	0.00070073	2.9528	0.0012852	4.5628	0.001986	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.7932	1	7592	7592		26.796	1.3459	1	3370400	+		36417	20855	24131	24140	41459	41459					0.044556478593108295
MAPPVRYC	8	Unmodified	_MAPPVRYC_					0	0	0		ENST00000489158.1_1_10:99205437-99205742:-|nuORF;ENST00000476234.5_1_10:99200926-99205742:-|nuORF;ENSG00000171311|ENST00000370902|EXOSC1	ENST00000489158.1_1_10:99205437-99205742:-|nuORF	ENST00000489158.1_1_10:99205437-99205742:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.7231750488281	2	468.725141	935.435729	-1.7168	-0.00080471	-2.0811	-0.00097548	-3.7979	-0.0017802	468.7240263126575	90.788	0.55689	90.969	90.68	91.237	0.18029					34	13	3	0	0	0	0.86791	1	9073	9073		28.254	1.5614	1	660760			36418	6657	24132	24141	41460	41460					-0.034571690522511744
MAPPVRYC	8	Unmodified	_MAPPVRYC_					0	0	0		ENST00000489158.1_1_10:99205437-99205742:-|nuORF;ENST00000476234.5_1_10:99200926-99205742:-|nuORF;ENSG00000171311|ENST00000370902|EXOSC1	ENST00000489158.1_1_10:99205437-99205742:-|nuORF	ENST00000489158.1_1_10:99205437-99205742:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.72320556640625	2	468.725141	935.435729	-1.2296	-0.00057635	-2.8507	-0.0013362	-4.0803	-0.0019126	468.7238369987016	86.792	1.5636	87.247	86.655	88.219	0.4543					99	37	4	0	0	0	0.89457	1	10205	10205		37.028	6.5248	1	4103600			36419	6657	24132	24141	41461	41461					-0.034571690522511744
MAPPVRYC	8	Unmodified	_MAPPVRYC_					0	0	0		ENST00000489158.1_1_10:99205437-99205742:-|nuORF;ENST00000476234.5_1_10:99200926-99205742:-|nuORF;ENSG00000171311|ENST00000370902|EXOSC1	ENST00000489158.1_1_10:99205437-99205742:-|nuORF	ENST00000489158.1_1_10:99205437-99205742:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7237243652344	2	468.725141	935.435729	-1.9165	-0.00089829	-2.2033	-0.0010327	-4.1197	-0.001931	468.7241207550591	90.104	1.871	90.574	90.243	92.114	0.47068					100	46	4	0	0	0	0.87276	1	10666	10666		29.842	1.5873	1	6559600			36420	6657	24132	24141	41462	41462					-0.034571690522511744
MAPPVRYC	8	Unmodified	_MAPPVRYC_					0	0	0		ENST00000489158.1_1_10:99205437-99205742:-|nuORF;ENST00000476234.5_1_10:99200926-99205742:-|nuORF;ENSG00000171311|ENST00000370902|EXOSC1	ENST00000489158.1_1_10:99205437-99205742:-|nuORF	ENST00000489158.1_1_10:99205437-99205742:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	468.725141	935.435729	-0.11391	-5.3392E-05	-3.6799	-0.0017249	-3.7938	-0.0017783	468.7233714388533	91.091	0.54968	91.16	90.962	91.512	0.069328	0.1825	-0.00037575	NaN	28.254	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	316580			36421	6657	24132	24141							-0.034571690522511744
MAPPVRYC	8	Unmodified	_MAPPVRYC_					0	0	0		ENST00000489158.1_1_10:99205437-99205742:-|nuORF;ENST00000476234.5_1_10:99200926-99205742:-|nuORF;ENSG00000171311|ENST00000370902|EXOSC1	ENST00000489158.1_1_10:99205437-99205742:-|nuORF	ENST00000489158.1_1_10:99205437-99205742:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	468.725141	935.435729	0.68243	0.00031987	-4.3632	-0.0020451	-3.6807	-0.0017253	468.7228903739819	90.788	0.7905	90.942	90.555	91.346	0.15388	-0.03552	-0.0010163	NaN	28.254	37	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	773450			36422	6657	24132	24141							-0.034571690522511744
MAPVLLACT	9	Unmodified	_MAPVLLACT_					0	0	0		ENST00000460203.1_1_X:14032428-14038575:-|nuORF	ENST00000460203.1_1_X:14032428-14038575:-|nuORF	ENST00000460203.1_1_X:14032428-14038575:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.2579650878906	2	459.742999	917.471446	-0.13264	-6.0979E-05	3.8641	0.0017765	3.7315	0.0017155	459.7450426727698	74.137	0.38181	74.696	74.499	74.881	0.55891					11	8	2	0	0	0	0.20789	1	8381	8381		25.45	3.7478	1	97554			36423	12004	24133	24142	41463	41463					0.009408684047457427
MAQNKYGIGEP	11	Unmodified	_MAQNKYGIGEP_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3663940429688	2	604.29243	1206.57031	3.2037	0.001936	0.45593	0.00027552	3.6597	0.0022115	604.793749339188	104.71	0.56921	104.67	104.32	104.89	-0.04039					25	13	4	0	0	0	0.17383	1	11498	11498		24.519	1.4767	1	159640			36424	5333	24134	24143	41464	41464					-0.024714370966421484
MAREQHIKV	9	Unmodified	_MAREQHIKV_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.302734375	2	556.305675	1110.5968	-1.2336	-0.00068626	-3.8385	-0.0021354	-5.0721	-0.0028217	556.3034098375188	44.438	0.9292	45.282	44.82	45.749	0.84438					57	22	3	0	0	0	0.69624	1	4112	4112		40.778	4.3314	1	4093700			36425	5333	24135	24144	41465	41465					0.04592296585337863
MARNTYYLTL	10	Unmodified	_MARNTYYLTL_					0	0	0		nc|ENSG00000148219|O75129-6|ASTN2	nc|ENSG00000148219|O75129-6|ASTN2	nc|ENSG00000148219|O75129-6|ASTN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.80908203125	3	415.881391	1244.62234	0.16304	6.7807E-05	2.6148	0.0010875	2.7779	0.0011553	415.88246807048455	19.332	0.35723	18.702	18.444	18.801	-0.6296					10	7	2	0	0	0	0.37624	1	500	500		31.634	8.2564	1	33644			36426	14982	24136	24145	41466	41466					0.009817263171044033
MARVLVPG	8	Unmodified	_MARVLVPG_					0	0	0		ENST00000529978.1_1_8:12870155-12879550:+|nuORF;ENSG00000250305|ENST00000524591|TRMT9B	ENST00000529978.1_1_8:12870155-12879550:+|nuORF	ENST00000529978.1_1_8:12870155-12879550:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7517395019531	2	421.749473	841.484393	2.261	0.00095358	2.5621	0.0010806	4.8232	0.0020342	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.88915	1	7471	7471		35.201	5.3592	1	532850			36427	8844	24137	24146	41467	41467					0.057310675791541144
MASRTSSEM	9	Unmodified	_MASRTSSEM_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.2149353027344	2	500.215334	998.416116	0.049762	2.4892E-05	0.052423	2.6223E-05	0.10219	5.1115E-05	500.2151079965767	23.422	0.56472	23.041	22.762	23.327	-0.38178					22	12	3	0	0	0	0.24527	2	1034	1034;1047		69.628	6.3214	1	152920			36428	8948;12632	24138	24147	41468;41469	41468					-0.08315589853668826
MASRTSSEM	9	Unmodified	_MASRTSSEM_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP;ENST00000488537.1_1_1:145440673-145441098:+|nuORF	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.2156677246094	2	500.215334	998.416116	1.1024	0.00055141	-1.0944	-0.00054743	0.0079668	3.9851E-06	500.2146759357686	23.402	0.47427	22.828	22.62	23.094	-0.57415					21	10	3	0	0	0	0.36616	1	1044	1044		60.118	8.7828	1	219000			36429	8948;12632	24138	24147	41470	41470					-0.08315589853668826
MASWGPHCPLV	11	Unmodified	_MASWGPHCPLV_					0	0	0			REV__ENST00000453743.6_1_22:30414646-30446524:-|nuORF	REV__ENST00000453743.6_1_22:30414646-30446524:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.2828979492188	2	599.280812	1196.54707	0.86368	0.00051758	0.85184	0.00051049	1.7155	0.0010281	599.2811697198755	41.901	1.0231	41.905	41.501	42.524	0.0043983					72	26	4	0	0	0	0.63176	1	2817	2817		40.778	3.6191	1	2426200	+		36430	26589	24139	24148	41471	41471					-0.043341544149825495
MATDLLDY	8	Unmodified	_MATDLLDY_					0	0	0			REV__nc|ENSG00000124155|Q969N2-3|PIGT	REV__nc|ENSG00000124155|Q969N2-3|PIGT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.2196044921875	2	471.217869	940.421184	-0.094114	-4.4348E-05	4.2078	0.0019828	4.1137	0.0019385	471.2196630157112	35.385	0.84711	35.373	35.035	35.882	-0.012203					37	18	3	0	0	0	0.91005	1	2178	2178		42.474	1.9018	1	295230	+		36431	18563	24140	24149	41472	41472					-0.05140962719394793
MATEPPIIN	9	Unmodified	_MATEPPIIN_					0	0	0		ENSG00000184459|ENST00000300399|BPIFC	ENSG00000184459|ENST00000300399|BPIFC	ENSG00000184459|ENST00000300399|BPIFC	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.29998779296875	2	493.254785	984.495018	0.40547	0.0002	-4.1025	-0.0020236	-3.697	-0.0018236	493.252699428882	57.361	1.3878	57.466	57.022	58.409	0.1055					181	67	4	0	0	0	0.20789	1	4816	4816		35.618	2.8059	1	1422800			36432	7614	24141	24150	41473	41473					0.002150054429193915
MATEPPIIN	9	Unmodified	_MATEPPIIN_					0	0	0		ENSG00000184459|ENST00000300399|BPIFC	ENSG00000184459|ENST00000300399|BPIFC	ENSG00000184459|ENST00000300399|BPIFC	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	493.254785	984.495018	-0.060739	-2.996E-05	-3.604	-0.0017777	-3.6647	-0.0018076	493.252892925929	57.465	1.0256	57.452	57.052	58.077	-0.013638	0.038046	-0.00040411	NaN	35.618	65	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197020			36433	7614	24141	24150							0.002150054429193915
MATEPPIIN	9	Unmodified	_MATEPPIIN_					0	0	0		ENSG00000184459|ENST00000300399|BPIFC	ENSG00000184459|ENST00000300399|BPIFC	ENSG00000184459|ENST00000300399|BPIFC	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	493.254785	984.495018	-0.09693	-4.7811E-05	-3.6333	-0.0017921	-3.7302	-0.0018399	493.2528772346658	57.412	0.97511	57.382	57.004	57.979	-0.029865	-0.03178	-0.00043302	NaN	35.618	51	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	225040			36434	7614	24141	24150							0.002150054429193915
MATKARID	8	Unmodified	_MATKARID_					0	0	0		L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|53|1|sense;L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|125|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|53|1|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|53|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.2442321777344	2	453.247295	904.480036	0.49279	0.00022335	-0.62754	-0.00028443	-0.13476	-6.1079E-05	453.24688966257435	31.07	0.7603	31.059	30.668	31.428	-0.010656					29	18	2	0	0	0	0.87479	1	1654	1654		30.504	0.6621	1	71636			36435	14645	24142	24151	41474	41474					0.02397558365578334
MATLFGYFV	9	Unmodified	_MATLFGYFV_					0	0	0			REV__ENSG00000129244|ENST00000250111|ATP1B2	REV__ENSG00000129244|ENST00000250111|ATP1B2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8267822265625	2	524.762246	1047.50994	-0.13442	-7.0538E-05	4.0765	0.0021392	3.9421	0.0020687	524.7645980852893	99.095	0.32048	99.318	99.168	99.488	0.22263					11	7	2	0	0	0	0.20789	1	10289	10289		33.516	0	1	50085	+		36436	18813	24143	24152	41475	41475					-0.011915026890619629
MATLPIKLPV	10	Unmodified	_MATLPIKLPV_					0	0	0		nc|ENSG00000177595|Q9HB75-5|PIDD1;ENST00000534525.5_1_11:799959-803120:-|nuORF;nc|ENSG00000177595|Q9HB75-6|PIDD1;ENST00000527357.5_1_11:799959-801918:-|nuORF	nc|ENSG00000177595|Q9HB75-5|PIDD1	nc|ENSG00000177595|Q9HB75-5|PIDD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.8605346679688	2	541.835746	1081.65694	-0.15327	-8.3046E-05	3.393	0.0018385	3.2398	0.0017554	541.8375825748411	36.616	0.66809	36.598	36.286	36.955	-0.018677					23	14	2	0	0	0	0.37624	1	2358	2358		24.519	5.1592	1	57746			36437	13409	24144	24153	41476	41476					0.11937594195865131
MATSFGKEQDT	11	Unmodified	_MATSFGKEQDT_					0	0	0			REV__ENST00000466431.6_1_3:9391695-9404624:-|nuORF	REV__ENST00000466431.6_1_3:9391695-9404624:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.587646484375	3	405.516777	1213.5285	-1.5556	-0.00063083	-1.8933	-0.00076776	-3.4489	-0.0013986	405.8499002455983	40.387	0.1394	40.977	40.874	41.013	0.58915					5	3	2	0	0	0	0.17289	1	3449	3449		16.53	0	1	125780	+		36438	27130	24145	24154	41477	41477					-0.06972037575815193
MATVMGSLPD	10	Unmodified	_MATVMGSLPD_					0	0	0		ENSG00000108839|ENST00000251535|ALOX12	ENSG00000108839|ENST00000251535|ALOX12	ENSG00000108839|ENST00000251535|ALOX12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.2388610839844	2	511.238278	1020.462	-0.41668	-0.00021302	1.3893	0.00071027	0.97263	0.00049725	511.2388007435022	51.114	1.0082	51.122	50.757	51.765	0.0077477					45	29	2	0	0	0	0.86348	1	4392	4392		31.53	4.8369	1	118550			36439	2434	24146	24155	41478	41478					-0.047409446714254955
MAVLSGPPIAE	11	Unmodified	_MAVLSGPPIAE_					0	0	0		nc|ENSG00000168679|O15374-4|SLC16A4	nc|ENSG00000168679|O15374-4|SLC16A4	nc|ENSG00000168679|O15374-4|SLC16A4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	542.2603149414062	2	542.788992	1083.56343	-0.26514	-0.00014391	-1.0366	-0.00056268	-1.3018	-0.00070659	542.7869644002976	58.279	0.26864	58.265	58.167	58.436	-0.013641					9	8	2	0	0	0	0.17478	1	5299	5299		32.812	0	1	33197			36440	15081	24147	24156	41479	41479					0.024992500227881465
MAWGWFHG	8	Unmodified	_MAWGWFHG_					0	0	0			REV__nc|ENSG00000156471|P48651-2|PTDSS1	REV__nc|ENSG00000156471|P48651-2|PTDSS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2908935546875	2	496.215798	990.417042	0.092911	4.6104E-05	3.9475	0.0019588	4.0404	0.0020049	496.2177125024267	17.832	0.6455	17.349	17.192	17.838	-0.48256					18	13	2	0	0	0	0.4196	1	296	296		24.504	10.729	1	107320	+		36441	20489	24148	24157	41480	41480					-0.0785496263179084
MAYMDIRL	8	Unmodified	_MAYMDIRL_					0	0	0			REV__ENST00000465020.5_1_3:38519799-38524820:+|nuORF	REV__ENST00000465020.5_1_3:38519799-38524820:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.75299072265625	2	506.751356	1011.48816	1.4444	0.00073194	1.6633	0.0008429	3.1077	0.0015748	506.75204042720367	98.5	2.1767	98.861	97.949	100.13	0.36137					121	53	5	0	0	0	0.79403	2	11904	11904;11917		63.306	5.495	1	5114500	+		36442	18061	24149	24158	41481;41482	41481					-0.017126307093121795
MAYTEKGEV	9	Unmodified	_MAYTEKGEV_					0	0	0		nc|ENSG00000187391|Q86UL8-2|MAGI2;ENSG00000187391|ENST00000354212|MAGI2	nc|ENSG00000187391|Q86UL8-2|MAGI2	nc|ENSG00000187391|Q86UL8-2|MAGI2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7706909179688	2	514.241875	1026.4692	0.20949	0.00010773	-0.62388	-0.00032083	-0.4144	-0.0002131	514.2414635267147	51.796	0.50441	52.231	51.948	52.452	0.43505					25	11	3	0	0	0	0.20789	1	5138	5138		37.159	1.5408	1	416300			36443	7853	24150	24159	41483	41483					-0.042978887993513126
MAYVVMPW	8	Unmodified	_MAYVVMPW_					0	0	0		ENST00000461645.1_1_10:103550753-103550792:-|nuORF	ENST00000461645.1_1_10:103550753-103550792:-|nuORF	ENST00000461645.1_1_10:103550753-103550792:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.7377014160156	2	498.737717	995.460881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.663	1	25.622	25.122	26.122	-0.04117								0	0	0	0.3048	1	1099	1099		43.626	10.11	1				36444	12027	24151	24160	41484	41484					-0.037031142496743996
MCCNRFSH	8	Unmodified	_MCCNRFSH_					0	0	0			REV__ENST00000478598.1_1_3:57505398-57505593:-|nuORF	REV__ENST00000478598.1_1_3:57505398-57505593:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.1931457519531	2	499.193682	996.372811	0.8372	0.00041792	-1.9793	-0.00098808	-1.1421	-0.00057015	499.1925125011114	95.874	0.69936	96.295	95.948	96.648	0.42051					44	16	3	0	0	0	0.884	1	11509	11509		33.516	5.2613	1	1508500	+		36445	27385	24152	24161	41485	41485					-0.12552058111941733
MCCQFEQHP	9	2 Carbamidomethyl (C)	_MC(Carbamidomethyl (C))C(Carbamidomethyl (C))QFEQHP_	MC(1)C(1)QFEQHP		MC(51)C(51)QFEQHP		0	2	0			REV__ENST00000284240.9_1_11:119289797-119290019:-|nuORF	REV__ENST00000284240.9_1_11:119289797-119290019:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.7324829101562	2	618.733368	1235.45218	-0.098336	-6.0844E-05	-3.4028	-0.0021054	-3.5011	-0.0021663	618.731228248724	79.257	0.53399	79.311	79.07	79.604	0.053841					24	15	2	0	0	0	0.51307	1	7823	7823		51.335	14.176	1	98885	+		36446	24625	24153	24162	41486	41486	302;303				-0.15612455948439674
MCCQFEQHP	9	2 Carbamidomethyl (C)	_MC(Carbamidomethyl (C))C(Carbamidomethyl (C))QFEQHP_					0	2	0			REV__ENST00000284240.9_1_11:119289797-119290019:-|nuORF	REV__ENST00000284240.9_1_11:119289797-119290019:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	618.733368	1235.45218	0.40847	0.00025273	-3.9612	-0.0024509	-3.5528	-0.0021982	618.7308277755455	79.501	0.64756	79.444	79.163	79.811	-0.056503	0.028119	-0.00054271	NaN	51.335	32	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87287	+		36447	24625	24153	24162			302;303				-0.15612455948439674
MCHKPDVEL	9	Unmodified	_MCHKPDVEL_					0	0	0		ENSG00000233802|ENST00000623787|TRIM49D2;ENSG00000223417|ENST00000420869|TRIM49D1;ENSG00000144015|ENST00000272395|TRIM43;ENSG00000204449|ENST00000448984|TRIM49C;ENSG00000182053|ENST00000332682|TRIM49B;ENSG00000168930|ENST00000329758|TRIM49	ENSG00000233802|ENST00000623787|TRIM49D2	ENSG00000233802|ENST00000623787|TRIM49D2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.25341796875	2	536.25172	1070.48889	-0.18867	-0.00010118	3.0557	0.0016386	2.867	0.0015374	536.2534618025845	79.483	1.8229	79.899	79.232	81.055	0.41621					80	42	3	0	0	0	0.41566	1	9112	9112		56.721	1.9447	1	764650			36448	8697	24154	24163	41487	41487					-0.04353836060249705
MCHKPDVEL	9	Unmodified	_MCHKPDVEL_					0	0	0		ENSG00000233802|ENST00000623787|TRIM49D2;ENSG00000223417|ENST00000420869|TRIM49D1;ENSG00000144015|ENST00000272395|TRIM43;ENSG00000204449|ENST00000448984|TRIM49C;ENSG00000182053|ENST00000332682|TRIM49B;ENSG00000168930|ENST00000329758|TRIM49	ENSG00000233802|ENST00000623787|TRIM49D2	ENSG00000233802|ENST00000623787|TRIM49D2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2528686523438	2	536.25172	1070.48889	-0.41191	-0.00022089	3.4259	0.0018371	3.014	0.0016163	536.2535396180798	79.374	1.231	79.923	79.276	80.507	0.54945					65	28	3	0	0	0	0.21969	2	9133	9121;9133		71.877	3.0906	1	741090			36449	8697	24154	24163	41488;41489	41489					-0.04353836060249705
MCHSHYPD	8	Unmodified	_MCHSHYPD_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.259033203125	2	495.183837	988.353121	-1.4666	-0.00072626	1.1845	0.00058652	-0.28219	-0.00013973	495.1842599710644	53.464	0.77629	53.464	53.141	53.917	0					39	23	2	0	0	0	0.4196	1	4476	4476		18.324	6.8134	1	199670	+		36450	22575	24155	24164	41490	41490					-0.14152110851057387
MCHSHYPD	8	Unmodified	_MCHSHYPD_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	495.183837	988.353121	-0.57822	-0.00028632	0.30437	0.00015072	-0.27384	-0.0001356	495.18382499389435	53.48	0.68114	53.455	53.091	53.772	-0.024754	-0.025917	-7.8876E-05	NaN	18.324	35	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	328790	+		36451	22575	24155	24164							-0.14152110851057387
MCHSHYPD	8	Unmodified	_MCHSHYPD_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	495.183837	988.353121	-0.65666	-0.00032517	0.23553	0.00011663	-0.42113	-0.00020854	495.1837965971017	53.532	0.73954	53.58	53.224	53.964	0.047806	0.098433	-0.00014706	NaN	18.324	40	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	236650	+		36452	22575	24155	24164							-0.14152110851057387
MCHSHYPD	8	Unmodified	_MCHSHYPD_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	495.183837	988.353121	0.3712	0.00018381	-0.83831	-0.00041512	-0.46711	-0.00023131	495.18327221805504	53.466	0.65092	53.537	53.221	53.872	0.070713	0.055404	-0.0012106	NaN	18.324	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	250090	+		36453	22575	24155	24164							-0.14152110851057387
MCHSHYPD	8	Unmodified	_MCHSHYPD_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	495.183837	988.353121	-0.40245	-0.00019928	0.054199	2.6838E-05	-0.34825	-0.00017245	495.1837216206906	53.44	0.60155	53.378	53.086	53.687	-0.062065	-0.10331	-0.00032664	NaN	18.324	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	263910	+		36454	22575	24155	24164							-0.14152110851057387
MCPISTCDN	9	Unmodified	_MCPISTCDN_					0	0	0			REV__ENSG00000188107|ENST00000503581|EYS	REV__ENSG00000188107|ENST00000503581|EYS	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.4330139160156	2	492.185188	982.355823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.281	1	73.281	72.781	73.781	0								0	0	0	0.30416	1	6591	6591		29.15	3.6994	1		+		36455	22978	24156	24165	41491	41491					-0.13606023508430098
MCPLSPTSR	9	Unmodified	_MCPLSPTSR_					0	0	0			REV__nc|ENSG00000170776|Q12802-4|AKAP13	REV__nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	496.236328125	2	496.238612	990.462672	0.16684	8.2794E-05	-1.093	-0.00054241	-0.9262	-0.00045962	496.2379691765779	30.659	0.53007	30.771	30.518	31.048	0.11198					40	25	2	0	0	0	0.7932	1	1370	1370		25.574	1.0549	1	128800	+		36456	21686	24157	24166	41492	41492					-0.032941052317255526
MCQEPQPATY	10	Unmodified	_MCQEPQPATY_					0	0	0			REV__ENST00000478869.1_1_2:203760778-203765795:-|nuORF	REV__ENST00000478869.1_1_2:203760778-203765795:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.2435302734375	2	584.244092	1166.47363	-1.7222	-0.0010062	1.574	0.0009196	-0.14819	-8.658E-05	584.2448524221044	60.063	1.1625	60.453	60.095	61.257	0.39077					80	31	3	0	0	0	0.77314	1	6415	6415		40.778	0.20554	1	4634700	+		36457	19474	24158	24167	41493	41493					-0.10294747648094926
MCQSPKRVSPP	11	Unmodified	_MCQSPKRVSPP_					0	0	0		ENST00000331334.4_1_14:96010780-96010885:+|nuORF	ENST00000331334.4_1_14:96010780-96010885:+|nuORF	ENST00000331334.4_1_14:96010780-96010885:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	410.2236633300781	3	410.542492	1228.60565	1.2858	0.00052786	2.9358	0.0012053	4.2216	0.0017331	410.54363297447776	25.107	0.45037	24.779	24.521	24.972	-0.32825					17	9	3	0	0	0	0.17586	1	1236	1236		16.53	0.6092	1	49876			36458	10121	24159	24168	41494	41494					0.0004890215952855215
MCSEEEMTR	9	Carbamidomethyl (C),Oxidation (M)	_MC(Carbamidomethyl (C))SEEEM(Oxidation (M))TR_	MC(1)SEEEMTR	MCSEEEM(1)TR	MC(42)SEEEMTR	M(-41)CSEEEM(41)TR	0	1	1		ENST00000426431.2_1_12:53806103-53806199:+|nuORF	ENST00000426431.2_1_12:53806103-53806199:+|nuORF	ENST00000426431.2_1_12:53806103-53806199:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.7222900390625	2	594.720123	1187.42569	-0.13993	-8.3221E-05	3.1493	0.001873	3.0094	0.0017897	594.7221284450768	79.537	2.5062	80.087	79.615	82.122	0.54945					138	59	4	0	0	0	0.67345	1	9172	9172		42.396	8.2236	2	4424400			36459	11553	24160	24169	41495	41495	148	184			-0.16052189630431712
MCSMKFGY	8	Unmodified	_MCSMKFGY_					0	0	0			REV__nc|ENSG00000185238|O60678-2|PRMT3	REV__nc|ENSG00000185238|O60678-2|PRMT3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.766845703125	2	483.697734	965.380916	0.30626	0.00014814	3.8461	0.0018604	4.1524	0.0020085	483.69937851014504	37.31	0.49611	37.796	37.451	37.947	0.48581					17	11	2	0	0	0	0.4196	1	2963	2963		62.978	9.627	1	57089	+		36460	22748	24161	24170	41496	41496					-0.10315923915163694
MCVYHQAQY	9	Unmodified	_MCVYHQAQY_					0	0	0			REV__ENSG00000157150|ENST00000287814|TIMP4	REV__ENSG00000157150|ENST00000287814|TIMP4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.8026123046875	2	571.741519	1141.46849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.284	1	38.378	37.878	38.878	0.094322								0	0	0	0.31828	1	2259	2259		24.203	1.1603	1		+		36461	20531	24162	24171	41497	41497					-0.09659006720039542
MDAQDSWE	8	Unmodified	_MDAQDSWE_					0	0	0		ENST00000484523.1_1_11:2335717-2337299:+|nuORF;ENST00000461200.5_1_11:2336930-2337299:+|nuORF	ENST00000484523.1_1_11:2335717-2337299:+|nuORF	ENST00000484523.1_1_11:2335717-2337299:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.6894226074219	2	491.184557	980.354561	-1.9086	-0.00093749	3.9261	0.0019284	2.0175	0.00099096	491.18638356161057	73.898	0.68971	73.942	73.788	74.477	0.043648					46	27	2	0	0	0	0.90983	2	7135	7135;7141		49.442	10.635	1	156400			36462	12019	24163	24172	41498;41499	41498					-0.13640198281314042
MDCVLVAGKVD	11	Unmodified	_MDCVLVAGKVD_					0	0	0			REV__ENST00000518968.1_1_8:50652851-50653445:-|nuORF	REV__ENST00000518968.1_1_8:50652851-50653445:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2841186523438	2	575.28576	1148.55697	-2.3954	-0.001378	-1.1451	-0.00065878	-3.5405	-0.0020368	575.2848611223629	42.012	0.6228	42.426	42.2	42.823	0.4139					28	15	3	0	0	0	0.31977	1	3718	3718		70.816	9.1249	1	687240	+		36463	19186	24164	24173	41500	41500					-0.011370112002396127
MDCVLVAGKVD	11	Unmodified	_MDCVLVAGKVD_					0	0	0			REV__ENST00000518968.1_1_8:50652851-50653445:-|nuORF	REV__ENST00000518968.1_1_8:50652851-50653445:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	575.28576	1148.55697	-2.3954	-0.001378	-1.1451	-0.00065878	-3.5405	-0.0020368	575.2848611223629	42.012	0.6228	42.426	42.2	42.823	0.4139	-0.002488	0.00020418	NaN	70.816	28	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	687240	+		36464	19186	24164	24173							-0.011370112002396127
MDCVLVAGKVD	11	Unmodified	_MDCVLVAGKVD_					0	0	0			REV__ENST00000518968.1_1_8:50652851-50653445:-|nuORF	REV__ENST00000518968.1_1_8:50652851-50653445:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	575.28576	1148.55697	-1.946	-0.0011195	-1.6688	-0.00096004	-3.6148	-0.0020796	575.2845878798759	41.797	0.61462	42.431	42.172	42.786	0.6339	0.002488	-0.00039833	NaN	70.816	28	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	583010	+		36465	19186	24164	24173							-0.011370112002396127
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	610.1827392578125	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.813	1	32.823	32.323	33.323	0.010899								0	0	0	0.45132	1	1862	1862		6.7355	0	1		+		36466	17873	24165	24174	41501	41501					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	610.1839599609375	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.762	1	33.706	33.206	34.206	-0.056385								0	0	0	0.45132	1	2074	2074		15.642	5.457	1		+		36467	17873	24165	24174	41502	41502					-0.24978377356342207
MDDIYIVY	8	Unmodified	_MDDIYIVY_					0	0	0			REV__ENSG00000187775|ENST00000389840|DNAH17	REV__ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.2383422851562	2	516.241344	1030.46813	-0.98571	-0.00050887	-4.0326	-0.0020818	-5.0183	-0.0025907	516.2391591330048	40.118	0.50422	40.074	39.837	40.341	-0.043697					16	11	2	0	0	0	0.35733	1	2939	2939		83.287	25.835	1	79951	+		36468	22946	24166	24175	41503	41503					-0.04588103168271118
MDDIYIVY	8	Unmodified	_MDDIYIVY_					0	0	0			REV__ENSG00000187775|ENST00000389840|DNAH17	REV__ENSG00000187775|ENST00000389840|DNAH17	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	516.241344	1030.46813	-1.3042	-0.00067328	-3.9385	-0.0020332	-5.2427	-0.0027065	516.2391436260338	40.026	0.50419	40.035	39.773	40.277	0.0092773	-0.065796	0.00043368	NaN	83.287	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82170	+		36469	22946	24166	24175							-0.04588103168271118
MDDKSVLCY	9	Oxidation (M)	_M(Oxidation (M))DDKSVLCY_		M(1)DDKSVLCY		M(46)DDKSVLCY	0	0	1			REV__ENST00000527295.5_1_11:405898-406649:-|nuORF	REV__ENST00000527295.5_1_11:405898-406649:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.237060546875	2	545.233193	1088.45183	-0.32548	-0.00017746	-2.8787	-0.0015695	-3.2041	-0.001747	545.2313743460636	55.86	0.50243	55.823	55.56	56.063	-0.036823					42	19	3	0	0	0	0.62081	1	4684	4684		45.952	6.9305	1	216120	+		36470	22743	24167	24176	41504	41504		345			-0.08885552396668572
MDEFEDVNFKT	11	Unmodified	_MDEFEDVNFKT_					0	0	0			REV__ENST00000431607.1_1_9:119942983-119943337:-|nuORF	REV__ENST00000431607.1_1_9:119942983-119943337:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.7872314453125	3	458.867587	1373.58093	1.7442	0.00080036	-2.3019	-0.0010563	-0.55768	-0.0002559	459.199941325031	93.347	0.20177	93.286	93.127	93.329	-0.06144					7	4	2	0	0	0	0.17363	1	9893	9893		31.068	3.4242	1	69963	+		36471	26622	24168	24177	41505	41505					-0.09091499232886235
MDELRRELP	9	Oxidation (M)	_M(Oxidation (M))DELRRELP_		M(1)DELRRELP		M(74)DELRRELP	0	0	1		nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814|ACTN1;ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.796630859375	2	587.79788	1173.58121	-0.61168	-0.00035955	-3.344	-0.0019656	-3.9557	-0.0023252	587.7963484848887	51.573	0.62993	52.008	51.7	52.33	0.43505					40	14	4	0	0	0	0.19953	1	5133	5133		73.975	13.003	1	1070700			36472	1269	24169	24178	41506	41506		19			0.0013596527762729238
MDGLKPVNKKN	11	Unmodified	_MDGLKPVNKKN_					0	0	0			REV__ENST00000475065.5_1_7:102963144-102967123:-|nuORF	REV__ENST00000475065.5_1_7:102963144-102967123:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	622.346435546875	2	622.344997	1242.67544	-1.2166	-0.00075714	4.1404	0.0025768	2.9238	0.0018196	622.3475745875962	95.767	2.795	95.97	95.191	97.986	0.20242					140	65	3	0	0	0	0.7144	1	9821	9821		29.17	1.0886	1	410920	+		36473	17572	24170	24179	41507	41507					0.06381104099773438
MDHGVKVAS	9	Unmodified	_MDHGVKVAS_					0	0	0		ENSG00000062725|ENST00000083182|APPBP2;ENST00000590244.1_1_17:58543761-58603427:-|nuORF	ENSG00000062725|ENST00000083182|APPBP2	ENSG00000062725|ENST00000083182|APPBP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2874755859375	2	472.236927	942.459301	-0.015667	-7.3987E-06	-1.8236	-0.00086116	-1.8392	-0.00086856	472.23545934812904	95.102	0.20227	95.148	95.046	95.249	0.046173					6	4	2	0	0	0	0.20789	1	10054	10054		49.442	23.991	1	116300			36474	1085	24171	24180	41508	41508					-0.014230320140768526
MDKKRKKAA	9	Unmodified	_MDKKRKKAA_					0	0	0			REV__ENST00000520511.1_1_8:124539464-124553254:-|nuORF	REV__ENST00000520511.1_1_8:124539464-124553254:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3268432617188	2	538.323868	1074.63318	1.246	0.00067076	4.3306	0.0023313	5.5767	0.003002	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.76764	1	10882	10882		34.173	2.2177	1	76567000	+		36475	20508	24172	24181	41509	41509					0.09885173482052778
MDKLSEILV	9	Unmodified	_MDKLSEILV_					0	0	0			REV__ENSG00000178597|ENST00000319098|PSAPL1	REV__ENSG00000178597|ENST00000319098|PSAPL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8275146484375	2	524.291368	1046.56818	1.2407	0.00065048	-0.81323	-0.00042637	0.42745	0.00022411	524.2910208505141	102.46	1.1572	102.5	101.63	102.79	0.04319					35	27	2	0	0	0	0.20789	1	11033	11033		58.782	7.4465	1	68380	+		36476	22286	24173	24182	41510	41510					0.04676134165538315
MDKVSIVLN	9	Unmodified	_MDKVSIVLN_					0	0	0			REV__ENSG00000079112|ENST00000027335|CDH17	REV__ENSG00000079112|ENST00000027335|CDH17	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80377197265625	2	509.78371	1017.55287	-0.054407	-2.7736E-05	0.27187	0.0001386	0.21747	0.00011086	509.7849582577936	88.093	0.69362	88.161	87.616	88.31	0.067711					24	15	2	0	0	0	0.20789	1	8873	8873		42.396	8.8806	1	67072	+		36477	16776	24174	24183	41511	41511					0.04479267368355977
MDLDRLRW	8	Unmodified	_MDLDRLRW_					0	0	0		ENST00000587905.5_3_18:13387618-13387645:+|nuORF	ENST00000587905.5_3_18:13387618-13387645:+|nuORF	ENST00000587905.5_3_18:13387618-13387645:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3162231445312	2	552.784576	1103.5546	-0.45661	-0.0002524	-1.3849	-0.00076557	-1.8415	-0.001018	552.7837252488644	75.397	0.54607	75.792	75.489	76.035	0.39507					24	12	3	0	0	0	0.4196	1	8488	8488		90.37	8.1293	1	156970			36478	14201	24175	24184	41512	41512					0.00696321176951642
MDLIDSEEL	9	Unmodified	_MDLIDSEEL_					0	0	0		ENST00000560974.3_1_15:69126737-69127085:+|nuORF	ENST00000560974.3_1_15:69126737-69127085:+|nuORF	ENST00000560974.3_1_15:69126737-69127085:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.7425537109375	2	532.744447	1063.47434	-0.13918	-7.4145E-05	-2.8714	-0.0015297	-3.0106	-0.0016039	532.742745424186	66.196	0.59277	66.748	66.485	67.078	0.55131					35	15	3	0	0	0	0.58668	1	7236	7236		47.657	5.2612	1	285220			36479	13823	24176	24185	41513	41513					-0.0548562972740001
MDLIDSEEL	9	Unmodified	_MDLIDSEEL_					0	0	0		ENST00000560974.3_1_15:69126737-69127085:+|nuORF	ENST00000560974.3_1_15:69126737-69127085:+|nuORF	ENST00000560974.3_1_15:69126737-69127085:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	532.744447	1063.47434	0.57987	0.00030892	-3.2753	-0.0017449	-2.6954	-0.001436	532.7424330149156	66.272	0.6438	66.658	66.349	66.993	0.38581	-0.044864	-0.00030724	NaN	47.657	36	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	212290			36480	13823	24176	24185							-0.0548562972740001
MDLIIMRR	8	Unmodified	_MDLIIMRR_					0	0	0			REV__ENST00000223145.9_1_7:8126792-8127023:+|nuORF	REV__ENST00000223145.9_1_7:8126792-8127023:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.826904296875	2	524.293722	1046.57289	0.81661	0.00042815	-2.0712	-0.0010859	-1.2545	-0.00065775	524.290958749269	99.748	0.63993	99.899	99.389	100.03	0.15073					16	14	2	0	0	0	0.4196	1	10364	10364		17.365	0	1	30343	+		36481	24170	24177	24186	41514	41514					0.05146739827296187
MDLKALLLE	9	Unmodified	_MDLKALLLE_					0	0	0		ENSG00000183258|ENST00000330503|DDX41;ENST00000505081.5_1_5:176938794-176940626:-|nuORF;ENST00000507900.5_1_5:176938794-176942272:-|nuORF;ENST00000503078.5_1_5:176938794-176943460:-|nuORF	ENSG00000183258|ENST00000330503|DDX41	ENSG00000183258|ENST00000330503|DDX41	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3047485351562	2	523.301736	1044.58892	-0.83282	-0.00043582	4.2992	0.0022498	3.4663	0.0018139	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.71772	1	8111	8111		39.253	7.6186	1	2778600			36482	7514	24178	24187	41515	41515					0.06840724545213561
MDLSAVLG	8	Unmodified	_MDLSAVLG_					0	0	0			REV__nc|ENSG00000178809|Q86UV6-2|TRIM74	REV__nc|ENSG00000178809|Q86UV6-2|TRIM74	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.2088623046875	2	403.209847	804.40514	1.1408	0.00046	-3.5043	-0.001413	-2.3635	-0.00095298	403.208345572438	85.63	1.9726	86.071	85.621	87.594	0.44144					91	47	3	0	0	0	0.86288	1	10018	10018		26.796	5.0938	1	1218200	+		36483	20031	24179	24188	41516	41516					-0.004886241656549828
MDPANLAWVC	10	Unmodified	_MDPANLAWVC_					0	0	0		ENST00000482818.1_1_22:29724334-29724502:-|nuORF	ENST00000482818.1_1_22:29724334-29724502:-|nuORF	ENST00000482818.1_1_22:29724334-29724502:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.340576171875	2	560.25172	1118.48889	0.86108	0.00048242	-0.86471	-0.00048446	-0.0036302	-2.0338E-06	560.2511124339798	102.62	0.25065	102.75	102.64	102.89	0.12622					7	5	2	0	0	0	0.37624	1	10834	10834		47.657	8.4045	1	46169			36484	12493	24180	24189	41517	41517					-0.06561836060245696
MDPFYIETY	9	Oxidation (M)	_M(Oxidation (M))DPFYIETY_		M(1)DPFYIETY		M(66)DPFYIETY	0	0	1			REV__ENSG00000178409|ENST00000369042|BEND3	REV__ENSG00000178409|ENST00000369042|BEND3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.753662109375	2	597.754815	1193.49508	-0.1698	-0.0001015	0.2328	0.00013916	0.063008	3.7663E-05	597.7548260397939	73.715	1.5956	74.274	74.024	75.62	0.55891					69	38	4	0	0	0	0.28875	1	8327	8327		65.803	7.5733	1	1057500	+		36485	22278	24181	24190	41518	41518		336			-0.09393039347719423
MDPKIQKTLRH	11	Unmodified	_MDPKIQKTLRH_					0	0	0			REV__nc|ENSG00000117614|O95926-2|SYF2	REV__nc|ENSG00000117614|O95926-2|SYF2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6083984375	3	456.258973	1365.75509	-1.2056	-0.00055007	2.1603	0.00098566	0.9547	0.00043559	456.2607613692857	68.257	0.29715	68.393	68.153	68.45	0.13522					14	10	2	0	0	0	0.17521	1	6117	6117		22.562	0	1	47840	+		36486	18272	24182	24191	41519	41519					0.08684170773767619
MDPKLNKRRG	10	Unmodified	_MDPKLNKRRG_					0	0	0		nc|ENSG00000197451|Q99729-3|HNRNPAB;nc|ENSG00000197451|Q99729-4|HNRNPAB;nc|ENSG00000197451|Q99729|HNRNPAB;ENSG00000197451|ENST00000358344|HNRNPAB	nc|ENSG00000197451|Q99729-3|HNRNPAB	nc|ENSG00000197451|Q99729-3|HNRNPAB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.8984069824219	3	405.564396	1213.67136	-1.5366	-0.00062318	2.6418	0.0010714	1.1052	0.00044823	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.85834	1	5606	5606		16.53	0	1	187890			36487	8167	24183	24192	41520	41520					0.07307059396703153
MDSAEKIMIY	10	Oxidation (M)	_MDSAEKIM(Oxidation (M))IY_		MDSAEKIM(1)IY		M(-47)DSAEKIM(47)IY	0	0	1		ENSG00000187510|ENST00000344636|PLEKHG7	ENSG00000187510|ENST00000344636|PLEKHG7	ENSG00000187510|ENST00000344636|PLEKHG7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.782958984375	2	608.78305	1215.55155	-0.43936	-0.00026747	1.4469	0.00088083	1.0075	0.00061336	608.78350099605	59.071	0.62346	59.057	58.77	59.393	-0.013729					32	19	2	0	0	0	0.64457	1	5414	5414		47.657	7.5992	2	187030			36488	7856	24184	24193	41521	41521		135			-0.04760734782735199
MDTEHRLQTY	10	Unmodified	_MDTEHRLQTY_					0	0	0			REV__nc|ENSG00000007237|O60861-2|GAS7	REV__nc|ENSG00000007237|O60861-2|GAS7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	647.30322265625	2	647.298244	1292.58194	1.385	0.00089649	2.6652	0.0017252	4.0502	0.0026217	647.3003381948532	53.286	1.1652	53.9	53.408	54.573	0.61436					57	27	3	0	0	0	0.33399	1	5400	5400		69.628	1.0018	1	1196400	+		36489	16120	24185	24194	41522	41522					-0.052652400732995375
MDTETKKIV	9	Unmodified	_MDTETKKIV_					0	0	0			REV__ENSG00000132170|ENST00000651735|PPARG	REV__ENSG00000132170|ENST00000651735|PPARG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.7870483398438	2	532.78645	1063.55835	1.9083	0.0010167	-0.85209	-0.00045398	1.0562	0.00056275	532.785779683441	100.65	0.72578	100.95	100.65	101.37	0.2999					34	17	3	0	0	0	0.64555	1	12182	12182		44.377	0	1	640410	+		36490	18986	24186	24195	41523	41523					0.029109461601592557
MDVCFGEFRE	10	Oxidation (M)	_M(Oxidation (M))DVCFGEFRE_		M(1)DVCFGEFRE		M(41)DVCFGEFRE	0	0	1			REV__nc|ENSG00000105737|Q16478-2|GRIK5	REV__nc|ENSG00000105737|Q16478-2|GRIK5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.83795166015625	3	416.838975	1247.49509	-0.39394	-0.00016421	-2.4444	-0.0010189	-2.8384	-0.0011831	416.83788538428985	30.06	1.0565	30.089	29.748	30.805	0.028618					55	23	3	0	0	0	0.76747	1	1964	1964		41.08	9.0459	1	1292800	+		36491	17566	24187	24196	41524	41524		251			-0.11875362619412044
MDVINREFMN	10	Unmodified	_MDVINREFMN_					0	0	0			REV__nc|ENSG00000171962|Q9H069-2|DRC3	REV__nc|ENSG00000171962|Q9H069-2|DRC3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.892822265625	2	634.79174	1267.56893	1.4946	0.00094878	4.3751	0.0027773	5.8697	0.0037261	634.7948965754074	105.14	0.30666	105.3	105.13	105.43	0.15924					10	7	2	0	0	0	0.37624	1	11178	11178		40.058	10.888	1	118150	+		36492	21792	24188	24197	41525	41525					-0.054153944570316526
MDVLQLLVA	9	Unmodified	_MDVLQLLVA_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2906188964844	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.76764	1	8714	8714		34.173	3.8548	1	9566900			36493	8292	24189	24198	41526	41526					0.06244455373735036
MEAKGVEEPG	10	Unmodified	_MEAKGVEEPG_					0	0	0		ENSG00000186517|ENST00000368013|ARHGAP30;nc|ENSG00000186517|Q7Z6I6-3|ARHGAP30	ENSG00000186517|ENST00000368013|ARHGAP30	ENSG00000186517|ENST00000368013|ARHGAP30	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7427368164062	2	523.744782	1045.47501	0.038016	1.9911E-05	-3.5163	-0.0018417	-3.4783	-0.0018217	523.7427344611064	48.943	1.0513	49.403	49.104	50.155	0.45983					57	25	4	0	0	0	0.54701	1	4745	4745		52.937	4.9772	1	1445300			36494	7801	24190	24199	41527	41527					-0.04590790287670643
MEAQAEGPLT	10	Unmodified	_MEAQAEGPLT_					0	0	0		ENSG00000128881|ENST00000267890|TTBK2;nc|ENSG00000128881|Q6IQ55-2|TTBK2	ENSG00000128881|ENST00000267890|TTBK2	ENSG00000128881|ENST00000267890|TTBK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7435302734375	2	523.744782	1045.47501	0.36278	0.00019	-3.9999	-0.0020949	-3.6371	-0.0019049	523.7425691029255	48.808	0.88323	49.712	49.409	50.292	0.90424					51	21	3	0	0	0	0.49268	1	4748	4748		56.434	13.959	1	1555000			36495	3565	24191	24200	41528	41528					-0.045907902876933804
MEARDKQVLR	10	Unmodified	_MEARDKQVLR_					0	0	0		nc|ENSG00000169372|P78560-2|CRADD;ENST00000549615.5_1_12:94071236-94184481:+|nuORF;ENSG00000169372|ENST00000332896|CRADD	nc|ENSG00000169372|P78560-2|CRADD	nc|ENSG00000169372|P78560-2|CRADD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.87109375	2	623.340246	1244.66594	1.3279	0.00082771	3.7779	0.0023549	5.1058	0.0031827	623.3422825186428	104.33	1.419	104.5	104.14	105.56	0.17095					61	35	3	0	0	0	0.37624	1	11085	11085		25.574	0	1	368020			36496	6490	24192	24201	41529	41529					0.053393358142329816
MECLGTRLN	9	Unmodified	_MECLGTRLN_					0	0	0		ENSG00000206052|ENST00000382713|DOK6	ENSG00000206052|ENST00000382713|DOK6	ENSG00000206052|ENST00000382713|DOK6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2950439453125	2	518.749344	1035.48414	-0.10014	-5.1946E-05	3.8267	0.0019851	3.7266	0.0019332	518.7505781672405	77.242	0.30773	77.81	77.704	78.012	0.56835					8	6	2	0	0	0	0.20789	1	8804	8804		54.776	17.748	1	79598			36497	8551	24193	24202	41530	41530					-0.03218720203017256
MECPPECPPE	10	Carbamidomethyl (C)	_MECPPEC(Carbamidomethyl (C))PPE_	MEC(0.004)PPEC(0.996)PPE		MEC(-24)PPEC(24)PPE		0	1	0		ENST00000489250.1_1_2:98354321-98354571:+|nuORF;nc|ENSG00000115085|P43403-2|ZAP70;ENST00000487283.5_1_2:98351482-98355958:+|nuORF;nc|ENSG00000115085|P43403-3|ZAP70;ENSG00000115085|ENST00000264972|ZAP70	ENST00000489250.1_1_2:98354321-98354571:+|nuORF	ENST00000489250.1_1_2:98354321-98354571:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.72216796875	2	594.722135	1187.42972	-0.14074	-8.3702E-05	0.35455	0.00021086	0.21381	0.00012716	594.7222857294024	79.63	2.5375	80.046	79.572	82.109	0.41621					126	60	3	0	0	0	0.77314	1	9152	9152		40.778	7.9657	2	4289000			36498	2812	24194	24203	41531	41531	33				-0.15650100136736
MEDSEEDCGG	10	Unmodified	_MEDSEEDCGG_					0	0	0		ENSG00000266074|ENST00000675386|BAHCC1;nc|ENSG00000266074|Q9P281|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.17041015625	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.573	1	21.557	21.057	22.057	-0.016428								0	0	0	0.45132	1	594	594		10.265	1.0823	1				36499	8950	24195	24204	41532	41532					-0.21549077329086685
MEEDSLFLF	9	Unmodified	_MEEDSLFLF_					0	0	0		ENST00000335712.10_2_2:60686003-60686195:-|nuORF	ENST00000335712.10_2_2:60686003-60686195:-|nuORF	ENST00000335712.10_2_2:60686003-60686195:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.7572631835938	2	565.757358	1129.50016	1.9428	0.0010991	-1.8109	-0.0010245	0.13186	7.4602E-05	565.7561391480956	102.11	0.70979	102.38	102.07	102.78	0.26323					36	16	3	0	0	0	0.39977	1	12383	12383		57.811	9.8957	1	876400			36500	10163	24196	24205	41533	41533					-0.05940735485114601
MEESADQAQR	10	Unmodified	_MEESADQAQR_					0	0	0		ENST00000590806.5_1_19:10922561-10941720:+|nuORF;nc|ENSG00000079805|P50570-3|DNM2;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000079805|P50570|DNM2;ENSG00000079805|ENST00000389253|DNM2;nc|ENSG00000079805|P50570-5|DNM2;ENST00000593203.1_1_19:10934344-10943016:+|nuORF	ENST00000590806.5_1_19:10922561-10941720:+|nuORF;ENST00000593203.1_1_19:10934344-10943016:+|nuORF	ENST00000593203.1_1_19:10934344-10943016:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.7495727539062	2	582.751127	1163.4877	-0.0080717	-4.7038E-06	-2.751	-0.0016032	-2.7591	-0.0016079	582.7495457268669	23.371	0.4152	23.432	23.267	23.682	0.060431					23	16	2	0	0	0	0.86587	1	771	771		29.17	0.020503	1	34758			36501	1428;14306	24197	24206	41534	41534					-0.08750378895456379
MEFAFRLYD	9	Unmodified	_MEFAFRLYD_					0	0	0		ENST00000558351.5_1_15:41556426-41571584:+|nuORF	ENST00000558351.5_1_15:41556426-41571584:+|nuORF	ENST00000558351.5_1_15:41556426-41571584:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	595.3367919921875	2	596.278792	1190.54303	-0.5811	-0.0003465	3.7104	0.0022125	3.1293	0.001866	596.2808332750676	110.08	0.80843	110.02	109.83	110.63	-0.055084					58	33	2	0	0	0	0.20789	1	12003	12003		38.806	6.8513	1	190270			36502	13788	24198	24207	41535	41535					-0.04461920637027106
MEGLQPMVQ	9	Oxidation (M)	_M(Oxidation (M))EGLQPMVQ_		M(0.977)EGLQPM(0.023)VQ		M(16)EGLQPM(-16)VQ	0	0	1			REV__ENSG00000253117|ENST00000254627|OC90	REV__ENSG00000253117|ENST00000254627|OC90	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.743896484375	2	524.743728	1047.4729	0.86491	0.00045386	-0.87728	-0.00046035	-0.012372	-6.4922E-06	524.74331637429	25.624	0.89235	25.592	25.164	26.057	-0.032125					47	27	2	0	0	0	0.47272	2	1052	1036;1052		53.351	8.6634	2	45071	+		36503	23875	24199	24208	41536;41537	41537		370			-0.048935422971680964
MEGLSSLVVLV	11	Unmodified	_MEGLSSLVVLV_					0	0	0			REV__ENSG00000168394|ENST00000354258|TAP1	REV__ENSG00000168394|ENST00000354258|TAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.82421875	2	573.825575	1145.6366	-0.56798	-0.00032592	-2.6466	-0.0015187	-3.2145	-0.0018446	573.8239162184817	47.872	0.7576	48.796	48.429	49.187	0.92315					48	18	4	0	0	0	0.64498	1	4624	4624		39.253	0.23134	1	1549600	+		36504	21483	24200	24209	41538	41538					0.0696037874540707
MEHLCLESP	9	Unmodified	_MEHLCLESP_					0	0	0			REV__nc|ENSG00000196632|Q9BYP7-3|WNK3	REV__nc|ENSG00000196632|Q9BYP7-3|WNK3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.790283203125	2	529.735902	1057.45725	-0.96321	-0.00051024	-0.69221	-0.00036669	-1.6554	-0.00087693	529.7354470374111	42.44	1.0166	42.874	42.485	43.502	0.4334					36	24	2	0	0	0	0.20789	1	3847	3847		27.882	18.699	1	269510	+		36505	23153	24201	24210	41539	41539					-0.06917828814198401
MEILMGGCDM	10	Unmodified	_MEILMGGCDM_					0	0	0			REV__nc|ENSG00000173805|P54257|HAP1	REV__nc|ENSG00000173805|P54257|HAP1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.1994018554688	2	550.218174	1098.42179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.494	1	32.462	31.962	32.962	-0.032677								0	0	0	0.45132	1	1521	1521		27.882	2.4321	1		+		36506	30036	24202	24211	41540	41540					-0.12347950657863294
MEKILDLHL	9	Oxidation (M)	_M(Oxidation (M))EKILDLHL_		M(1)EKILDLHL		M(44)EKILDLHL	0	0	1			REV__ENSG00000116649|ENST00000376957|SRM	REV__ENSG00000116649|ENST00000376957|SRM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.3087158203125	2	564.310092	1126.60563	0.17086	9.6419E-05	-3.189	-0.0017996	-3.0181	-0.0017031	564.3081374246972	75.153	0.67262	75.548	75.279	75.952	0.39507					37	15	3	0	0	0	0.64555	1	8485	8485		44.377	6.5657	1	1075700	+		36507	18206	24203	24212	41541	41541		265			0.0473922543117169
MEKIVIKSE	9	Unmodified	_MEKIVIKSE_					0	0	0		ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.8063354492188	2	538.804642	1075.59473	0.058912	3.1742E-05	3.7296	0.0020095	3.7885	0.0020413	538.806607108325	90.57	3.5579	90.787	89.308	92.866	0.21737					211	84	4	0	0	0	0.73802	1	8960	8960		37.812	3.639	1	874780			36508	7607	24204	24213	41542	41542					0.0599582305687818
MEKKIDKYT	9	Unmodified	_MEKKIDKYT_					0	0	0		ENST00000425147.1_1_21:26734448-26734742:+|nuORF	ENST00000425147.1_1_21:26734448-26734742:+|nuORF	ENST00000425147.1_1_21:26734448-26734742:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.80859375	2	578.307549	1154.60055	1.222	0.00070671	4.2626	0.0024651	5.4846	0.0031718	578.309704725343	110.55	0.79523	110.61	110.26	111.05	0.054062					38	28	2	0	0	0	0.78536	1	13370	13370		29.15	0	1	246080			36509	11526	24205	24214	41543	41543					0.029429215685240706
MEKNKKDW	8	Unmodified	_MEKNKKDW_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.7691650390625	2	539.771134	1077.52771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.985	1	78.39	77.89	78.89	0.40531								0	0	0	0.30712	1	8891	8891		49.442	3.4896	1		+		36510	18396	24206	24215	41544	41544					-0.007947874342335126
MEKRKMTRR	9	Unmodified	_MEKRKMTRR_					0	0	0			REV__nc|ENSG00000139973|Q17RD7-3|SYT16	REV__nc|ENSG00000139973|Q17RD7-3|SYT16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.3458251953125	2	618.344809	1234.67506	-0.32375	-0.00020019	2.1441	0.0013258	1.8204	0.0011256	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.76764	1	10373	10373		34.173	1.3601	1	926440	+		36511	19585	24207	24216	41545	41545					0.06711405898931844
MEKVASRTY	9	Unmodified	_MEKVASRTY_					0	0	0		nc|ENSG00000162729|Q969P0-2|IGSF8;ENSG00000162729|ENST00000314485|IGSF8;nc|ENSG00000162729|Q969P0-3|IGSF8	nc|ENSG00000162729|Q969P0-2|IGSF8	nc|ENSG00000162729|Q969P0-2|IGSF8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2279663085938	2	542.776416	1083.53828	-0.39736	-0.00021568	-0.44519	-0.00024164	-0.84255	-0.00045732	542.7762776949032	55.802	0.24625	56.203	56.033	56.279	0.40101					9	5	2	0	0	0	0.20789	1	5743	5743		60.118	10.677	1	182810			36512	5725	24208	24217	41546	41546					-0.00014804779766564025
MELGLFAQ	8	Unmodified	_MELGLFAQ_					0	0	0			REV__nc|ENSG00000159082|O43426-4|SYNJ1	REV__nc|ENSG00000159082|O43426-4|SYNJ1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.2578125	2	454.730946	907.447339	0.63675	0.00028955	3.2457	0.0014759	3.8824	0.0017655	454.73244002937486	28.356	0.58841	28.333	28.163	28.751	-0.023556					18	13	2	0	0	0	0.4196	1	1356	1356		47.916	0	1	42074	+		36513	20635	24209	24218	41547	41547					-0.010086487572721126
MELGLTAA	8	Unmodified	_MELGLTAA_					0	0	0		nc|ENSG00000157106|Q96Q15-4|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1;nc|ENSG00000157106|Q96Q15-2|SMG1;ENSG00000157106|ENST00000446231|SMG1	nc|ENSG00000157106|Q96Q15-4|SMG1	nc|ENSG00000157106|Q96Q15-4|SMG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.20928955078125	2	403.209847	804.40514	0.85516	0.00034481	-2.9281	-0.0011806	-2.0729	-0.00083583	403.2085877273137	85.891	2.1457	85.817	85.277	87.423	-0.073761					115	49	4	0	0	0	0.86791	1	8809	8809		28.254	0	1	1526100			36514	5411	24210	24219	41548	41548					-0.004886241656663515
MELIKVLEA	9	Unmodified	_MELIKVLEA_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;ENST00000488988.5_1_3:52422617-52433783:+|nuORF;ENST00000486752.5_1_3:52422617-52434459:+|nuORF	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.301736	1044.58892	1.2403	0.00064907	2.4762	0.0012958	3.7166	0.0019449	523.302929168532	91.415	2.5669	91.46	91.141	93.708	0.045448					111	60	2	0	0	0	0.74721	1	9534	9534		37.159	1.5408	1	1018700			36515	2792	24211	24220	41549	41549					0.06840724545213561
MELRLIAPK	9	Unmodified	_MELRLIAPK_					0	0	0			REV__ENST00000593829.5_1_19:18417881-18418118:-|nuORF	REV__ENST00000593829.5_1_19:18417881-18418118:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7609252929688	2	535.823169	1069.63179	0.29087	0.00015586	-2.1427	-0.0011481	-1.8519	-0.00099228	535.8218307561705	49.563	1.2681	50.408	49.746	51.014	0.845					46	30	2	0	0	0	0.20789	1	4891	4891		20.947	6.0821	1	394850	+		36516	29231	24212	24221	41550	41550					0.09975539393280997
MELTAMLGR	9	Unmodified	_MELTAMLGR_					0	0	0		nc|ENSG00000083067|Q9HCF6-8|TRPM3;nc|ENSG00000083067|Q9HCF6-4|TRPM3;nc|ENSG00000083067|Q9HCF6-2|TRPM3;nc|ENSG00000083067|Q9HCF6-5|TRPM3;nc|ENSG00000083067|Q9HCF6-6|TRPM3;ENSG00000083067|ENST00000677713|TRPM3;nc|ENSG00000083067|Q9HCF6-7|TRPM3;nc|ENSG00000083067|Q9HCF6|TRPM3;nc|ENSG00000083067|Q9HCF6-11|TRPM3;nc|ENSG00000083067|Q9HCF6-10|TRPM3	nc|ENSG00000083067|Q9HCF6-8|TRPM3	nc|ENSG00000083067|Q9HCF6-8|TRPM3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.8232421875	2	511.262087	1020.50962	-1.4081	-0.00071991	3.793	0.0019392	2.3849	0.0012193	511.2639327729036	83.062	0.55754	83.188	83.043	83.601	0.12601					16	12	2	0	0	0	0.20789	1	8011	8011		51.335	16.135	1	77653			36517	1494	24213	24222	41551	41551					0.00018754319421532273
MELTAMLGR	9	Unmodified	_MELTAMLGR_					0	0	0		nc|ENSG00000083067|Q9HCF6-8|TRPM3;nc|ENSG00000083067|Q9HCF6-4|TRPM3;nc|ENSG00000083067|Q9HCF6-2|TRPM3;nc|ENSG00000083067|Q9HCF6-5|TRPM3;nc|ENSG00000083067|Q9HCF6-6|TRPM3;ENSG00000083067|ENST00000677713|TRPM3;nc|ENSG00000083067|Q9HCF6-7|TRPM3;nc|ENSG00000083067|Q9HCF6|TRPM3;nc|ENSG00000083067|Q9HCF6-11|TRPM3;nc|ENSG00000083067|Q9HCF6-10|TRPM3	nc|ENSG00000083067|Q9HCF6-8|TRPM3	nc|ENSG00000083067|Q9HCF6-8|TRPM3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	511.262087	1020.50962	0.65486	0.0003348	1.9048	0.00097387	2.5597	0.0013087	511.2628635953975	83.206	0.55714	83.353	83.056	83.613	0.14695	0.10504	-0.0012088	NaN	51.335	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66213			36518	1494	24213	24222							0.00018754319421532273
MENHRERKSK	10	Unmodified	_MENHRERKSK_					0	0	0			REV__ENSG00000198752|ENST00000361246|CDC42BPB	REV__ENSG00000198752|ENST00000361246|CDC42BPB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2287292480469	3	438.894694	1313.66225	0.33078	0.00014518	3.3883	0.0014871	3.7191	0.0016323	439.23105598480976	30.574	0.48178	30.578	30.141	30.623	0.0037212					12	10	2	0	0	0	0.37624	1	2027	2027		25.126	7.9592	1	42301	+		36519	23373	24214	24223	41552	41552					0.01796666040377204
MENSESETFD	10	Unmodified	_MENSESETFD_					0	0	0		nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.7221069335938	2	594.721701	1187.42885	-0.13993	-8.3221E-05	0.49736	0.00029579	0.35742	0.00021257	594.7221284450768	79.537	2.5062	80.087	79.615	82.122	0.54945					138	59	4	0	0	0	0.67571	2	9136	9136;9210		45.972	0.95004	1	4424400			36520	5083	24215	24224	41553;41554	41553					-0.1573689998044756
MENWSKVI	8	Unmodified	_MENWSKVI_					0	0	0		ENST00000556451.5_1_14:37716427-37736181:+|nuORF	ENST00000556451.5_1_14:37716427-37736181:+|nuORF	ENST00000556451.5_1_14:37716427-37736181:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.75579833984375	2	503.754953	1005.49535	-0.96536	-0.00048631	3.3693	0.0016973	2.4039	0.001211	503.75639008045766	31.348	0.78025	31.428	31.033	31.814	0.079834					34	16	3	0	0	0	0.38363	1	2128	2128		90.777	5.8611	1	454940			36521	13747	24216	24225	41555	41555					-0.007175748372105772
MEPVKQHRPLR	11	Unmodified	_MEPVKQHRPLR_					0	0	0			REV__ENSG00000178397|ENST00000313324|FAM220A	REV__ENSG00000178397|ENST00000313324|FAM220A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2821960449219	3	464.262717	1389.76632	-1.1249	-0.00052224	2.4623	0.0011432	1.3375	0.00062093	464.26401852902694	43.673	0.4382	44.123	43.924	44.362	0.45025					23	10	3	0	0	0	0.17911	1	3947	3947		18.531	7.9692	1	489460	+		36522	22276	24217	24226	41556	41556					0.08702992867915782
MEQKFTTFV	9	Unmodified	_MEQKFTTFV_					0	0	0			REV__ENSG00000084652|ENST00000373610|TXLNA	REV__ENSG00000084652|ENST00000373610|TXLNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.2818603515625	2	565.781167	1129.54778	-0.20819	-0.00011779	-0.32787	-0.0001855	-0.53606	-0.00030329	566.2808896498921	27.478	1.3279	27.303	26.523	27.851	-0.17559					53	29	3	0	0	0	0.69624	1	1568	1568		40.778	1.5253	1	445570	+		36523	16876	24218	24227	41557	41557					-0.011810364942903107
MERASVCMPE	10	Oxidation (M)	_MERASVCM(Oxidation (M))PE_		MERASVCM(1)PE		M(-74)ERASVCM(74)PE	0	0	1			REV__chr14:54406469-54408745|13|34.92|0.02|10.72|+|2|TE_info:L1P2,L1P2_dup1366,L1,LINE,donor,-,54404879,54406469|None,CDKN3|18	REV__chr14:54406469-54408745|13|34.92|0.02|10.72|+|2|TE_info:L1P2,L1P2_dup1366,L1,LINE,donor,-,54404879,54406469|None,CDKN3|18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.7425537109375	2	584.743402	1167.47225	-0.34979	-0.00020454	1.2833	0.00075039	0.9335	0.00054586	584.7438054303972	78.094	0.66336	78.658	78.416	79.079	0.56332					28	15	3	0	0	0	0.19302	1	8947	8947		87.696	23.489	2	338400	+		36524	15598	24219	24228	41558	41558		222			-0.10478705008517863
MERASVCMPE	10	Oxidation (M)	_MERASVCM(Oxidation (M))PE_					0	0	1			REV__chr14:54406469-54408745|13|34.92|0.02|10.72|+|2|TE_info:L1P2,L1P2_dup1366,L1,LINE,donor,-,54404879,54406469|None,CDKN3|18	REV__chr14:54406469-54408745|13|34.92|0.02|10.72|+|2|TE_info:L1P2,L1P2_dup1366,L1,LINE,donor,-,54404879,54406469|None,CDKN3|18	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	584.743402	1167.47225	-0.76073	-0.00044483	1.6927	0.00098978	0.93194	0.00054495	584.7442528703099	78.219	0.62541	78.624	78.384	79.009	0.4053	-0.016902	0.00024383	NaN	87.696	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	292180	+		36525	15598	24219	24228				222			-0.10478705008517863
MERASVCMPE	10	Oxidation (M)	_MERASVCM(Oxidation (M))PE_					0	0	1			REV__chr14:54406469-54408745|13|34.92|0.02|10.72|+|2|TE_info:L1P2,L1P2_dup1366,L1,LINE,donor,-,54404879,54406469|None,CDKN3|18	REV__chr14:54406469-54408745|13|34.92|0.02|10.72|+|2|TE_info:L1P2,L1P2_dup1366,L1,LINE,donor,-,54404879,54406469|None,CDKN3|18	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	584.743402	1167.47225	-0.34979	-0.00020454	1.2833	0.00075039	0.9335	0.00054586	584.7438054303972	78.094	0.66336	78.658	78.416	79.079	0.56332	0.016902	-0.00023494	NaN	87.696	28	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338400	+		36526	15598	24219	24228				222			-0.10478705008517863
MERIFSFL	8	Oxidation (M)	_M(Oxidation (M))ERIFSFL_		M(1)ERIFSFL		M(79)ERIFSFL	0	0	1		ENSG00000124571|ENST00000265351|XPO5	ENSG00000124571|ENST00000265351|XPO5	ENSG00000124571|ENST00000265351|XPO5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.7706909179688	2	529.770603	1057.52665	0.52899	0.00028025	-0.25093	-0.00013293	0.27807	0.00014731	529.7701667802362	67.166	0.82552	67.293	67.003	67.829	0.12748					76	32	3	0	0	0	0.42407	1	5994	5994		79.451	10.966	1	704470			36527	3343	24220	24229	41559	41559		65			0.00018998196878783347
MERLIKKRE	9	Unmodified	_MERLIKKRE_					0	0	0		nc|ENSG00000116852|O75037-3|KIF21B;ENSG00000116852|ENST00000461742|KIF21B;nc|ENSG00000116852|O75037-2|KIF21B;nc|ENSG00000116852|O75037|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.8584594726562	2	601.855532	1201.69651	1.0107	0.00060827	2.6149	0.0015738	3.6255	0.002182	601.8569689467788	103.23	2.1882	103.41	103.08	105.27	0.18297					123	54	4	0	0	0	0.76764	1	10983	10983		34.173	1.3601	1	2928900			36528	2951	24221	24230	41560	41560					0.10373114199296651
MERPSSSE	8	Unmodified	_MERPSSSE_					0	0	0			REV__ENSG00000268043|ENST00000698835|NBPF12	REV__ENSG00000268043|ENST00000698835|NBPF12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.6971130371094	2	461.700374	921.386196	-0.84053	-0.00038807	-4.2971	-0.001984	-5.1377	-0.0023721	461.6982735900567	36.523	0.89709	36.47	36.02	36.917	-0.053558					42	19	3	0	0	0	0.87922	1	2462	2462		31.955	4.0726	1	262950	+		36529	23971	24222	24231	41561	41561					-0.07764205527348622
MERRKPMVAV	10	Unmodified	_MERRKPMVAV_					0	0	0		chr8:73956054-73972042|19|17.79|0.56|5.0|-|0|ELOC,ELOC|1;chr8:73956054-73971870|13|10.46|0.04|8.14|-|0|ELOC,ELOC|1;chr8:73956054-73970579|17|11.18|0.02|8.94|-|0|ELOC,ELOC|1	chr8:73956054-73972042|19|17.79|0.56|5.0|-|0|ELOC,ELOC|1	chr8:73956054-73972042|19|17.79|0.56|5.0|-|0|ELOC,ELOC|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	608.8373413085938	2	608.836285	1215.65802	1.1133	0.00067784	0.91813	0.00055899	2.0315	0.0012368	608.836684936877	110.21	0.79676	110.33	110.13	110.93	0.11658					62	26	4	0	0	0	0.85694	1	11869	11869		21.96	0.27414	1	3625100			36530	522	24223	24232	41562	41562					0.058814852931391215
MERVKFGE	8	Unmodified	_MERVKFGE_					0	0	0			REV__ENST00000456101.6_1_6:109773431-109775944:-|nuORF	REV__ENST00000456101.6_1_6:109773431-109775944:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.2501525878906	2	498.252577	994.490601	-0.069747	-3.4752E-05	-3.6845	-0.0018358	-3.7543	-0.0018706	498.25088875748816	84.603	2.5601	84.67	83.598	86.158	0.067169					118	58	3	0	0	0	0.86791	1	8358	8358		28.254	1.4582	1	104900	+		36531	19236	24224	24233	41563	41563					-0.006864589799647547
MESLSLVA	8	Unmodified	_MESLSLVA_					0	0	0			REV__ENSG00000198825|ENST00000650623|INPP5F	REV__ENSG00000198825|ENST00000650623|INPP5F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.2218322753906	2	425.222954	848.431355	-1.8628	-0.00079212	-0.90885	-0.00038646	-2.7717	-0.0011786	425.2224549524542	88.246	1.2975	88.415	87.955	89.252	0.16923					79	30	4	0	0	0	0.86791	1	8719	8719		28.254	0	1	953360	+		36532	23389	24225	24234	41564	41564					0.00107645005834911
MESNPDTEG	9	Unmodified	_MESNPDTEG_					0	0	0		ENSG00000144407|ENST00000272847|PTH2R	ENSG00000144407|ENST00000272847|PTH2R	ENSG00000144407|ENST00000272847|PTH2R	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.1889953613281	2	490.187297	978.36004	1.4203	0.00069622	-0.21301	-0.00010441	1.2073	0.0005918	490.18711076213503	104.07	0.94505	104.26	103.72	104.67	0.18887					34	22	2	0	0	0	0.7932	1	12674	12674		21.96	0.25755	1	206830			36533	4706	24226	24235	41565	41565					-0.13000519489492035
MESVAKTEKT	10	Unmodified	_MESVAKTEKT_					0	0	0			REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C	REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.2870483398438	2	562.286814	1122.55907	0.31099	0.00017487	-0.37907	-0.00021315	-0.06808	-3.828E-05	562.2863310461746	65.939	0.91332	66.491	66.2	67.113	0.5526					43	24	2	0	0	0	0.86106	1	7222	7222		33.922	4.7721	1	344450	+		36534	18266	24227	24236	41566	41566					0.002697408091989928
METGTLYLA	9	Unmodified	_METGTLYLA_					0	0	0		ENSG00000101327|ENST00000217305|PDYN	ENSG00000101327|ENST00000217305|PDYN	ENSG00000101327|ENST00000217305|PDYN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.7466125488281	2	499.746793	997.479033	-0.85273	-0.00042615	1.1589	0.00057914	0.30615	0.000153	499.74724797378053	74.742	3.1094	75.133	73.907	77.016	0.3911					155	76	3	0	0	0	0.72402	1	8371	8371		38.806	1.647	1	1032200			36535	1929	24228	24237	41567	41567					-0.019807007939903087
METPLKAGPF	10	Unmodified	_METPLKAGPF_					0	0	0		nc|ENSG00000291110|Q309B1|TRIM16L;nc|ENSG00000221926|O95361-2|TRIM16;ENSG00000221926|ENST00000649191|TRIM16	nc|ENSG00000291110|Q309B1|TRIM16L	nc|ENSG00000291110|Q309B1|TRIM16L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.1612548828125	2	545.78371	1089.55287	-1.9462	-0.0010622	3.8214	0.0020857	1.8752	0.0010235	545.7858379955668	42.186	0.3605	42.883	42.691	43.052	0.69754					12	8	2	0	0	0	0.37624	1	3747	3747		22.58	0	1	224650			36536	8685	24229	24238	41568	41568					0.011672673683506218
MEVPEAGMISD	11	Oxidation (M)	_MEVPEAGM(Oxidation (M))ISD_		MEVPEAGM(1)ISD		M(-50)EVPEAGM(50)ISD	0	0	1		ENSG00000181472|ENST00000325144|ZBTB2	ENSG00000181472|ENST00000325144|ZBTB2	ENSG00000181472|ENST00000325144|ZBTB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.7521362304688	2	597.754489	1193.49443	-0.28658	-0.0001713	0.72497	0.00043335	0.43839	0.00026205	597.7549277115289	73.862	1.0699	74.25	74.041	75.11	0.38779					46	25	3	0	0	0	0.48529	1	8299	8299		52.937	6.9847	2	1089800			36537	7391	24230	24239	41569	41569		127			-0.09458202059090581
MEVPEAGMISD	11	Oxidation (M)	_MEVPEAGM(Oxidation (M))ISD_		MEVPEAGM(1)ISD		M(-52)EVPEAGM(52)ISD	0	0	1		ENSG00000181472|ENST00000325144|ZBTB2	ENSG00000181472|ENST00000325144|ZBTB2	ENSG00000181472|ENST00000325144|ZBTB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.7538452148438	2	597.754489	1193.49443	-0.1698	-0.0001015	0.77812	0.00046512	0.60832	0.00036363	597.7548260397939	73.715	1.5956	74.274	74.024	75.62	0.55891					69	38	4	0	0	0	0.48529	1	8315	8315		52.937	8.8199	2	1057500			36538	7391	24230	24239	41570	41570		127			-0.09458202059090581
MEVVEREV	8	Unmodified	_MEVVEREV_					0	0	0			REV__ENST00000472045.1_1_5:131820398-131820557:-|nuORF	REV__ENST00000472045.1_1_5:131820398-131820557:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2593994140625	2	495.749867	989.485181	-1.7414	-0.00086332	-0.19893	-9.862E-05	-1.9404	-0.00096194	495.74811775411587	41.003	0.42319	41.637	41.391	41.814	0.6339					15	11	2	0	0	0	0.4196	1	3561	3561		63.306	17.354	1	338170	+		36539	27251	24231	24240	41571	41571					-0.00998182562443617
MEWDSHECA	9	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))EWDSHEC(Carbamidomethyl (C))A_	MEWDSHEC(1)A	M(1)EWDSHECA	MEWDSHEC(48)A	M(48)EWDSHECA	0	1	1			REV__ENST00000338167.9_1_11:129979382-129979436:+|nuORF	REV__ENST00000338167.9_1_11:129979382-129979436:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.7028198242188	2	590.705331	1179.39611	0.29516	0.00017435	-1.95	-0.0011519	-1.6548	-0.00097753	590.7040629175187	26.015	1.1286	25.976	25.547	26.676	-0.038525					71	25	4	0	0	0	0.58151	1	1204	1204		47.916	15.103	1	150260	+		36540	25213	24232	24241	41572	41572	307	391			-0.18641385584260206
MEWFFKWLRRS	11	Unmodified	_MEWFFKWLRRS_					0	0	0			REV__nc|ENSG00000115306|Q01082-3|SPTBN1	REV__nc|ENSG00000115306|Q01082-3|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.2744140625	3	529.274734	1584.80237	-0.036706	-1.9428E-05	-2.9238	-0.0015475	-2.9605	-0.0015669	529.2730968301188	71.514	1.1317	71.548	71.148	72.279	0.034004					161	46	5	0	0	0	0.79224	2	6810	6747;6810		12.957	5.7732	1	1262700	+		36541	18106	24233	24242	41573;41574	41574					0.03336450044753292
MEWFFKWLRRS	11	Unmodified	_MEWFFKWLRRS_					0	0	0			REV__nc|ENSG00000115306|Q01082-3|SPTBN1	REV__nc|ENSG00000115306|Q01082-3|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.273193359375	3	529.274734	1584.80237	-0.21869	-0.00011575	-2.6525	-0.0014039	-2.8712	-0.0015196	529.2732380924513	71.384	1.1038	71.345	70.966	72.069	-0.039009					157	45	5	0	0	0	0.73647	3	6938	6938;6990;7001		25.068	6.2979	1	1427100	+		36542	18106	24233	24242	41575;41576;41577	41575					0.03336450044753292
MEWFFKWLRRS	11	Unmodified	_MEWFFKWLRRS_					0	0	0			REV__nc|ENSG00000115306|Q01082-3|SPTBN1	REV__nc|ENSG00000115306|Q01082-3|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.2731323242188	3	529.274734	1584.80237	0.087973	4.6562E-05	-3.0282	-0.0016028	-2.9402	-0.0015562	529.6074494906942	71.247	0.96676	71.285	70.943	71.91	0.038055					159	46	4	0	0	0	0.77205	1	6860	6860		17.167	3.6588	1	1379900	+		36543	18106	24233	24242	41578	41578					0.03336450044753292
MFDIVGTHL	9	Unmodified	_MFDIVGTHL_					0	0	0		nc|ENSG00000158796|O75618-2|DEDD;ENSG00000158796|ENST00000368006|DEDD	nc|ENSG00000158796|O75618-2|DEDD	nc|ENSG00000158796|O75618-2|DEDD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7620849609375	2	516.762778	1031.511	-0.42035	-0.00021722	0.50846	0.00026275	0.088109	4.5531E-05	516.7628946081267	73.335	1.2875	73.722	73.456	74.744	0.38779					47	33	2	0	0	0	0.021087	3	8225	8225;8238;8248		124.59	64.3	1	1046700			36544	15029	24234	24243	41579;41580;41581	41579					-0.003492883201715813
MFDIVGTHL	9	Unmodified	_MFDIVGTHL_					0	0	0		nc|ENSG00000158796|O75618-2|DEDD;ENSG00000158796|ENST00000368006|DEDD	nc|ENSG00000158796|O75618-2|DEDD	nc|ENSG00000158796|O75618-2|DEDD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.762451171875	2	516.762778	1031.511	0.068942	3.5627E-05	-0.027601	-1.4263E-05	0.041342	2.1364E-05	516.7626391548183	73.182	0.67781	73.736	73.438	74.116	0.55386					37	21	2	0	0	0	0.041233	4	8242	8230;8242;8254;8264		111.65	48.67	1	1101600			36545	15029	24234	24243	41582;41583;41584;41585	41583					-0.003492883201715813
MFELQAPDVSS	11	Unmodified	_MFELQAPDVSS_					0	0	0			REV__ENSG00000267978|ENST00000595065|MAGEA9B	REV__ENSG00000267978|ENST00000595065|MAGEA9B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3306274414062	2	612.284271	1222.55399	-0.44	-0.00026941	-3.8807	-0.0023761	-4.3207	-0.0026455	612.2817253221464	78.673	0.64874	78.725	78.449	79.097	0.051674					27	16	2	0	0	0	0.17527	1	7727	7727		40.058	2.2467	1	60586	+		36546	18547	24235	24244	41586	41586					-0.04838563053385769
MFFGREVD	8	Unmodified	_MFFGREVD_					0	0	0		nc|ENSG00000149182|Q8N6H7-3|ARFGAP2;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2;ENSG00000149182|ENST00000524782|ARFGAP2	nc|ENSG00000149182|Q8N6H7-3|ARFGAP2	nc|ENSG00000149182|Q8N6H7-3|ARFGAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.733154296875	2	500.731477	999.448402	-1.5363	-0.00076925	4.0334	0.0020196	2.4971	0.0012504	500.73334402025296	30.737	0.79642	30.798	30.438	31.235	0.060919					41	17	3	0	0	0	0.88944	1	2049	2049		57.811	3.035	1	690980			36547	5003	24236	24245	41587	41587					-0.051344343883556576
MFFPLLVL	8	Unmodified	_MFFPLLVL_					0	0	0			REV__ENSG00000064989|ENST00000392370|CALCRL	REV__ENSG00000064989|ENST00000392370|CALCRL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.2850646972656	2	490.2879	978.561247	-1.2259	-0.00060106	0.20882	0.00010238	-1.0171	-0.00049868	490.28667802000507	60.14	0.68478	60.531	60.135	60.819	0.39077					34	18	3	0	0	0	0.84567	1	6384	6384		24.504	0	1	439180	+		36548	16487	24237	24246	41588	41588					0.07110866075640843
MFGLLLNLHST	11	Unmodified	_MFGLLLNLHST_					0	0	0			REV__ENSG00000056558|ENST00000373887|TRAF1	REV__ENSG00000056558|ENST00000373887|TRAF1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	623.341064453125	2	623.336641	1244.65873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.568	1	68.627	68.127	69.127	0.059288								0	0	0	0.56276	1	6156	6156		33.922	2.3918	1		+		36549	16420	24238	24247	41589	41589					0.04618603213816641
MFIAFLLLLLS	11	Unmodified	_MFIAFLLLLLS_					0	0	0			REV__nc|ENSG00000161558|Q96AN5-2|TMEM143	REV__nc|ENSG00000161558|Q96AN5-2|TMEM143	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3590087890625	2	640.887978	1279.7614	-1.1569	-0.00074142	3.5825	0.002296	2.4257	0.0015546	641.392146154998	100.09	0.22111	100.26	100.1	100.33	0.17199					7	4	2	0	0	0	0.1725	1	10364	10364		14.865	0	1	20546	+		36550	20768	24239	24248	41590	41590					0.13271295952608853
MFIKEVLES	9	Unmodified	_MFIKEVLES_					0	0	0			REV__ENSG00000145715|ENST00000274376|RASA1;REV__ENST00000515800.6_1_5:86667940-86686697:+|nuORF	REV__ENSG00000145715|ENST00000274376|RASA1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	547.8297119140625	2	548.291368	1094.56818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.978	1	68.106	67.606	68.606	0.12748								0	0	0	0.29475	1	6098	6098		32.812	0.85756	1		+		36551	19959;28041	24240	24249	41591	41591					0.024681341655195865
MFKKFNRR	8	Unmodified	_MFKKFNRR_					0	0	0			REV__ENSG00000183690|ENST00000420999|EFHC2	REV__ENSG00000183690|ENST00000420999|EFHC2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.8141479492188	2	563.818753	1125.62295	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.29	1	57.277	56.777	57.777	-0.012203								0	0	0	0.29452	1	5172	5172		33.516	0	1		+		36552	22621	24241	24250	41592	41592					0.06516610547487289
MFLRGQRVEQ	10	Unmodified	_MFLRGQRVEQ_					0	0	0			REV__ENSG00000196169|ENST00000389916|KIF19	REV__ENSG00000196169|ENST00000389916|KIF19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.89105224609375	3	421.892401	1262.65538	0.2151	9.0749E-05	-2.7463	-0.0011586	-2.5312	-0.0010679	421.89119617428577	29.171	1.018	29.193	28.86	29.878	0.021851					131	50	4	0	0	0	0.78666	1	1215	1215		40.058	2.55	1	799910	+		36553	23097	24242	24251	41593	41593					0.034553531598476184
MFPGRARLQG	10	Unmodified	_MFPGRARLQG_					0	0	0		ENST00000558813.5_1_15:48623623-48624486:+|nuORF;ENST00000331200.7_1_15:48623623-48623713:+|nuORF	ENST00000558813.5_1_15:48623623-48624486:+|nuORF	ENST00000558813.5_1_15:48623623-48624486:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.804931640625	2	566.805842	1131.59713	-0.52899	-0.00029983	-0.2571	-0.00014573	-0.78609	-0.00044556	566.8055131198089	62.726	2.3736	63.113	62.36	64.733	0.38779					117	54	3	0	0	0	0.5766	1	6706	6706		51.335	3.4199	1	633890			36554	10118	24243	24252	41594	41594					0.036597163051965254
MFRDIAQQLQ	10	Unmodified	_MFRDIAQQLQ_					0	0	0		nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;ENSG00000105355|ENST00000221957|PLIN3	nc|ENSG00000105355|O60664-2|PLIN3	nc|ENSG00000105355|O60664-2|PLIN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.3248291015625	2	625.321522	1248.62849	-0.11128	-6.9589E-05	-2.4332	-0.0015216	-2.5445	-0.0015911	625.3198556455025	64.556	1.0904	64.521	64.106	65.197	-0.034256					72	32	3	0	0	0	0.60985	1	6216	6216		49.536	3.0793	1	434670			36555	2206	24244	24253	41595	41595					0.014122445486236757
MFRYSNVLN	9	Unmodified	_MFRYSNVLN_					0	0	0			REV__nc|ENSG00000138079|Q07837-4|SLC3A1	REV__nc|ENSG00000138079|Q07837-4|SLC3A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.3383178710938	2	572.284408	1142.55426	-1.0833	-0.00061994	-2.9794	-0.001705	-4.0626	-0.002325	572.282480910162	60.329	0.99596	60.719	60.293	61.289	0.38945					68	27	3	0	0	0	0.20789	1	6474	6474		18.262	0	1	2040300	+		36556	29883	24245	24254	41596	41596					-0.011310985428735876
MFTKKATT	8	Unmodified	_MFTKKATT_					0	0	0			REV__ENST00000520970.5_1_8:22058712-22069238:+|nuORF	REV__ENST00000520970.5_1_8:22058712-22069238:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2537841796875	2	464.252046	926.489538	0.72749	0.00033774	3.541	0.0016439	4.2685	0.0019816	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.88601	1	8514	8514		34.173	3.8548	1	1578600	+		36557	28111	24246	24255	41597	41597					0.023353266510980575
MFVCKSYQT	9	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))FVC(Carbamidomethyl (C))KSYQT_	MFVC(1)KSYQT	M(1)FVCKSYQT	MFVC(85)KSYQT	M(85)FVCKSYQT	0	1	1			REV__nc|ENSG00000163754|P46976-2|GYG1	REV__nc|ENSG00000163754|P46976-2|GYG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.2635498046875	2	590.262284	1178.51002	0.086308	5.0945E-05	2.8	0.0016528	2.8863	0.0017037	590.2638249232199	82.298	1.0209	82.772	82.355	83.376	0.47383					73	24	4	0	0	0	0.14386	1	9552	9552		84.916	10.941	1	3517700	+		36558	20966	24247	24256	41598	41598	259	313			-0.07209870751376002
MFVTIAVV	8	Unmodified	_MFVTIAVV_					0	0	0			REV__ENSG00000161509|ENST00000293190|GRIN2C	REV__ENSG00000161509|ENST00000293190|GRIN2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.256103515625	2	440.254057	878.493561	0.40702	0.00017919	2.7426	0.0012074	3.1496	0.0013866	440.25507557275375	63.556	1.6285	64.111	63.598	65.226	0.55449					91	38	4	0	0	0	0.87276	1	6814	6814		29.842	1.5873	1	1465000	+		36559	20765	24248	24257	41599	41599					0.04945416144835235
MGCARLLPG	9	Oxidation (M)	_M(Oxidation (M))GCARLLPG_		M(1)GCARLLPG		M(41)GCARLLPG	0	0	1			REV__ENSG00000258713|ENST00000603872|C20orf141	REV__ENSG00000258713|ENST00000603872|C20orf141	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.23455810546875	2	467.235873	932.457192	-1.0422	-0.00048693	-4.3783	-0.0020457	-5.4204	-0.0025326	467.23380164983837	67.827	1.4777	67.962	67.582	69.06	0.13521					154	58	4	0	0	0	0.69914	1	6173	6173		40.573	7.057	1	2802800	+		36560	23929	24249	24258	41600	41600		372			-0.011737840235127805
MGGGGGGV	8	Unmodified	_MGGGGGGV_					0	0	0			REV__ENST00000368218.8_2_1:156698377-156698662:+|nuORF	REV__ENST00000368218.8_2_1:156698377-156698662:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8023681640625	1	591.255522	590.248246	-0.6407	-0.00037882	2.0719	0.001225	1.4312	0.00084623	591.2573098934782	62.638	2.3482	62.633	62.111	64.46	-0.0055504					198	100	3	0	0	0	0.4196	1	5962	5962		5.0869	0	1	489820	+		36561	25588	24250	24259	41601	41601					-0.06326864265315635
MGGGGGGV	8	Unmodified	_MGGGGGGV_					0	0	0			REV__ENST00000368218.8_2_1:156698377-156698662:+|nuORF	REV__ENST00000368218.8_2_1:156698377-156698662:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		1	591.255522	590.248246	-0.8224	-0.00048625	3.5285	0.0020862	2.7061	0.0016	591.257448485957	62.754	2.522	62.754	61.983	64.505	0	0.014632	0.000513	NaN	5.0869	180	119	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	219900	+		36562	25588	24250	24259							-0.06326864265315635
MGGGGGGV	8	Unmodified	_MGGGGGGV_					0	0	0			REV__ENST00000368218.8_2_1:156698377-156698662:+|nuORF	REV__ENST00000368218.8_2_1:156698377-156698662:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		1	591.255522	590.248246	0.54845	0.00032427	0.92768	0.00054849	1.4761	0.00087277	591.2566408541268	62.626	1.835	62.747	62.016	63.851	0.1209	0.0068363	-0.0010247	NaN	5.0869	153	85	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	375450	+		36563	25588	24250	24259							-0.06326864265315635
MGGGGGGV	8	Unmodified	_MGGGGGGV_					0	0	0			REV__ENST00000368218.8_2_1:156698377-156698662:+|nuORF	REV__ENST00000368218.8_2_1:156698377-156698662:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		1	591.255522	590.248246	-0.42566	-0.00025167	1.5348	0.00090747	1.1092	0.0006558	591.2572244867516	62.725	2.4466	62.748	62.063	64.509	0.022984	0.0084073	-0.00066576	NaN	5.0869	185	107	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	404950	+		36564	25588	24250	24259							-0.06326864265315635
MGGIMAPKD	9	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))MGGIM(Oxidation (M))APKD_		MGGIM(1)APKD		M(-36)GGIM(36)APKD	1	0	1		ENSG00000117153|ENST00000367261|KLHL12;nc|ENSG00000117153|Q53G59-2|KLHL12	ENSG00000117153|ENST00000367261|KLHL12	ENSG00000117153|ENST00000367261|KLHL12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.2242431640625	2	489.225171	976.435788	-1.3762	-0.00067326	0.61052	0.00029868	-0.76565	-0.00037458	489.22532307064523	22.996	1.091	22.946	22.505	23.596	-0.050077					72	40	3	0	0	0	0.38563	1	748	748		58.782	10.866	2	149760			36565	2965	24251	24260	41602	41602		59			-0.05337213842915389
MGGRGHHERPR	11	Unmodified	_MGGRGHHERPR_					0	0	0			REV__nc|ENSG00000143847|O75335-2|PPFIA4	REV__nc|ENSG00000143847|O75335-2|PPFIA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	645.826171875	2	645.323254	1288.63195	-0.0080801	-5.2143E-06	4.4233	0.0028544	4.4152	0.0028492	645.8277080825007	62.07	0.32075	62.061	61.901	62.222	-0.0094147					14	9	2	0	0	0	0.65746	1	5754	5754		37.812	5.061	1	217470	+		36566	19847	24252	24261	41603	41603					-0.000816478341448601
MGGRGHHERPR	11	Unmodified	_MGGRGHHERPR_					0	0	0			REV__nc|ENSG00000143847|O75335-2|PPFIA4	REV__nc|ENSG00000143847|O75335-2|PPFIA4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	645.826171875	2	645.323254	1288.63195	-0.0080801	-5.2143E-06	4.4233	0.0028544	4.4152	0.0028492	645.8277080825007	62.07	0.32075	62.061	61.901	62.222	-0.0094147					14	9	2	0	0	0	0.17245	1	5754	5754		37.812	11.748	1	217470	+		36567	19847	24252	24261	41604	41604					-0.000816478341448601
MGIGVDTI	8	Unmodified	_MGIGVDTI_					0	0	0		ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2088317871094	2	403.209847	804.40514	-1.2088	-0.00048741	-0.91536	-0.00036908	-2.1242	-0.00085649	403.20939277352	86.047	3.2334	86.047	85.315	88.548	0					134	74	4	0	0	0	0.89457	1	8198	8198		37.028	3.5129	1	1412000			36568	1721;14802	24253	24262	41605	41605					-0.004886241656436141
MGIGVDTI	8	Unmodified	_MGIGVDTI_					0	0	0		ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.20904541015625	2	403.209847	804.40514	-1.8542	-0.00074762	-0.040711	-1.6415E-05	-1.8949	-0.00076404	403.2097445210388	85.667	2.0538	85.825	85.416	87.47	0.15851					103	47	4	0	0	0	0.86288	1	8356	8356		26.796	2.5934	1	1256500			36569	1721;14802	24253	24262	41606	41606					-0.004886241656436141
MGIIRFLLLY	10	Unmodified	_MGIIRFLLLY_					0	0	0		ENST00000476571.1_1_6:124443035-124712010:+|nuORF;nc|ENSG00000188580|Q5VXU1-3|NKAIN2	ENST00000476571.1_1_6:124443035-124712010:+|nuORF	ENST00000476571.1_1_6:124443035-124712010:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8692626953125	2	619.87012	1237.72569	1.6172	0.0010025	-2.9932	-0.0018554	-1.376	-0.00085297	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.86452	1	11196	11196		30.504	3.8107	1	1541100			36570	12341	24254	24263	41607	41607					0.11633258495589871
MGIKKHLLS	9	Unmodified	_MGIKKHLLS_					0	0	0			REV__nc|ENSG00000164627|Q6ZMV9-3|KIF6	REV__nc|ENSG00000164627|Q6ZMV9-3|KIF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8091430664062	2	513.810062	1025.60557	0.35777	0.00018383	-2.489	-0.0012789	-2.1312	-0.001095	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.7932	1	3838	3838		21.96	1.013	1	1443600	+		36571	21097	24255	24264	41608	41608					0.09379270221825209
MGIPSVTT	8	Unmodified	_MGIPSVTT_					0	0	0		ENSG00000111713|ENST00000261195|GYS2	ENSG00000111713|ENST00000261195|GYS2	ENSG00000111713|ENST00000261195|GYS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2087707519531	2	403.209847	804.40514	0.59952	0.00024173	-2.8003	-0.0011291	-2.2008	-0.00088739	403.20865750603866	85.732	1.8224	85.881	85.428	87.25	0.14857					100	42	4	0	0	0	0.9159	1	8429	8429		44.531	9.3304	1	1321000			36572	2607	24256	24265	41609	41609					-0.004886241656436141
MGIPSVTT	8	Unmodified	_MGIPSVTT_					0	0	0		ENSG00000111713|ENST00000261195|GYS2	ENSG00000111713|ENST00000261195|GYS2	ENSG00000111713|ENST00000261195|GYS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.208984375	2	403.209847	804.40514	-0.60775	-0.00024505	-1.7885	-0.00072113	-2.3962	-0.00096618	403.2090521764512	85.615	1.3902	86.062	85.664	87.054	0.44736					79	33	4	0	0	0	0.81548	1	10009	10009		20.482	0	1	1223100			36573	2607	24256	24265	41610	41610					-0.004886241656436141
MGISLTTILI	10	Unmodified	_MGISLTTILI_					0	0	0		ENSG00000233056|ENST00000447535|ERVH48-1	ENSG00000233056|ENST00000447535|ERVH48-1	ENSG00000233056|ENST00000447535|ERVH48-1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.318359375	2	531.317386	1060.62022	1.7702	0.00094052	1.4799	0.00078629	3.25	0.0017268	531.3180188955155	94.734	1.4927	95.166	94.713	96.206	0.4324					93	35	4	0	0	0	0.31414	2	11290	11290;11340		71.296	25.323	1	2051100			36574	8742	24257	24266	41611;41612	41611					0.09233297579316968
MGISLTTILI	10	Unmodified	_MGISLTTILI_					0	0	0		ENSG00000233056|ENST00000447535|ERVH48-1	ENSG00000233056|ENST00000447535|ERVH48-1	ENSG00000233056|ENST00000447535|ERVH48-1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3192749023438	2	531.317386	1060.62022	0.23787	0.00012639	2.413	0.0012821	2.6509	0.0014084	531.3183123814076	94.878	1.4608	95.298	94.89	96.35	0.41963					101	35	4	0	0	0	0.86589	1	11416	11416		29.15	6.1071	1	2093500			36575	8742	24257	24266	41613	41613					0.09233297579316968
MGKGIFGAH	9	Oxidation (M)	_M(Oxidation (M))GKGIFGAH_		M(1)GKGIFGAH		M(63)GKGIFGAH	0	0	1			REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.2333984375	2	467.234187	932.453822	-0.11758	-5.4936E-05	-1.4524	-0.0006786	-1.5699	-0.00073353	467.2333042677725	68.306	1.2873	68.328	67.991	69.278	0.021599					130	57	3	0	0	0	0.32449	1	6438	6438		62.978	10.042	1	1529800	+		36576	20170	24258	24267	41614	41614		300			-0.01510710805882809
MGKGIFGAH	9	Oxidation (M)	_M(Oxidation (M))GKGIFGAH_		M(1)GKGIFGAH		M(83)GKGIFGAH	0	0	1			REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.23333740234375	2	467.234187	932.453822	-1.0422	-0.00048693	-0.7711	-0.00036028	-1.8133	-0.00084722	467.23380164983837	67.827	1.4777	67.962	67.582	69.06	0.13521					154	58	4	0	0	0	0.1538	1	6060	6060		83.287	30.988	1	2802800	+		36577	20170	24258	24267	41615	41615		300			-0.01510710805882809
MGKLLRRAS	9	Unmodified	_MGKLLRRAS_					0	0	0		nc|ENSG00000180347|Q6ZRS4-3|ITPRID1;ENSG00000180347|ENST00000615280|ITPRID1;nc|ENSG00000180347|Q6ZRS4-4|ITPRID1	nc|ENSG00000180347|Q6ZRS4-3|ITPRID1	nc|ENSG00000180347|Q6ZRS4-3|ITPRID1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3140258789062	2	516.310761	1030.60697	3.1012	0.0016012	3.1636	0.0016334	6.2648	0.0032346	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.7932	1	13235	13235		26.693	3.1702	1	1162600			36578	7327	24259	24268	41616	41616					0.09288904310574253
MGKLQYGKLK	10	Oxidation (M)	_M(Oxidation (M))GKLQYGKLK_		M(1)GKLQYGKLK		M(51)GKLQYGKLK	0	0	1			REV__ENSG00000128908|ENST00000648947|INO80	REV__ENSG00000128908|ENST00000648947|INO80	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	591.838134765625	2	591.339184	1180.66381	-0.63956	-0.0003782	-1.8232	-0.0010781	-2.4628	-0.0014563	591.338043030153	79.461	1.0112	79.521	78.846	79.857	0.059349					60	29	3	0	0	0	0.5766	1	7746	7746		51.335	8.4712	1	297830	+		36579	18798	24260	24269	41617	41617		272			0.08070907076421463
MGKNLIAC	8	Unmodified	_MGKNLIAC_					0	0	0		ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	425.22216796875	2	425.219691	848.42483	2.7046	0.0011501	2.2163	0.0009424	4.9209	0.0020925	425.22052081582814	88.286	1.4528	88.336	87.945	89.398	0.050415					74	34	3	0	0	0	0.86791	1	9075	9075		28.254	5.2118	1	1023100			36580	13035	24261	24270	41618	41618					-0.005445714265306378
MGKRRKQK	8	Unmodified	_MGKRRKQK_					0	0	0		ENSG00000104237|ENST00000220676|RP1	ENSG00000104237|ENST00000220676|RP1	ENSG00000104237|ENST00000220676|RP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.31103515625	2	516.316377	1030.6182	-1.5619	-0.00080641	-2.9846	-0.001541	-4.5464	-0.0023474	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86791	1	12949	12949		28.254	0.17279	1	4038100			36581	2121	24262	24271	41619	41619					0.10411726404709043
MGKVKDIVI	9	Oxidation (M)	_M(Oxidation (M))GKVKDIVI_		M(1)GKVKDIVI		M(41)GKVKDIVI	0	0	1		ENST00000558833.1_1_15:59969298-59969517:+|nuORF;ENSG00000100564|ENST00000216452|PIGH	ENST00000558833.1_1_15:59969298-59969517:+|nuORF	ENST00000558833.1_1_15:59969298-59969517:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8037109375	2	509.801903	1017.58925	-0.073627	-3.7535E-05	3.6181	0.0018445	3.5444	0.001807	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.69624	1	10212	10212		40.778	7.2626	1	3087300			36582	1849	24263	24272	41620	41620		36			0.08116144265056846
MGLIGIVLGG	10	Unmodified	_MGLIGIVLGG_					0	0	0			REV__ENST00000370272.8_1_1:93826284-93826383:+|nuORF	REV__ENST00000370272.8_1_1:93826284-93826383:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.280029296875	2	465.278063	928.541574	1.2805	0.00059581	2.916	0.0013568	4.1966	0.0019526	465.27931677409214	88.976	2.3969	88.903	88.477	90.874	-0.07238					118	56	4	0	0	0	0.85976	2	9306	9306;9318		35.201	1.6851	1	1648000	+		36583	25650	24264	24273	41621;41622	41621					0.07444490064881393
MGLIGIVLGG	10	Unmodified	_MGLIGIVLGG_					0	0	0			REV__ENST00000370272.8_1_1:93826284-93826383:+|nuORF	REV__ENST00000370272.8_1_1:93826284-93826383:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.2798156738281	2	465.278063	928.541574	0.34135	0.00015882	3.9162	0.0018221	4.2576	0.0019809	465.2797316035461	88.798	1.7872	88.849	88.394	90.181	0.050415					106	41	4	0	0	0	0.86786	1	9123	9123		26.796	0	1	1568700	+		36584	25650	24264	24273	41623	41623					0.07444490064881393
MGLIGIVLGG	10	Unmodified	_MGLIGIVLGG_					0	0	0			REV__ENST00000370272.8_1_1:93826284-93826383:+|nuORF	REV__ENST00000370272.8_1_1:93826284-93826383:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.27996826171875	2	465.278063	928.541574	0.66247	0.00030823	3.4781	0.0016183	4.1405	0.0019265	465.27955521005777	88.84	2.0285	88.99	88.523	90.552	0.15055					102	47	4	0	0	0	0.85976	3	8842	8842;8877;8889		35.201	1.6851	1	1291300	+		36585	25650	24264	24273	41624;41625;41626	41624					0.07444490064881393
MGLLAMYT	8	Unmodified	_MGLLAMYT_					0	0	0		ENSG00000116260|ENST00000367602|QSOX1	ENSG00000116260|ENST00000367602|QSOX1	ENSG00000116260|ENST00000367602|QSOX1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27423095703125	2	450.2219	898.429246	1.6856	0.00075888	3.2387	0.0014581	4.9243	0.002217	450.2229862841713	92.955	0.24449	92.894	92.763	93.008	-0.061432					8	5	2	0	0	0	0.4196	1	9844	9844		26.796	0	1	44558			36586	2912	24265	24274	41627	41627					-0.024031070036244273
MGLLLFKRR	9	Unmodified	_MGLLLFKRR_					0	0	0			REV__ENSG00000101331|ENST00000452892|CCM2L	REV__ENSG00000101331|ENST00000452892|CCM2L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3297119140625	2	567.352428	1132.6903	0.4822	0.00027358	-2.385	-0.0013531	-1.9028	-0.0010796	567.3509203653883	92.398	0.33965	92.622	92.533	92.873	0.2239					10	7	2	0	0	0	0.20789	1	9376	9376		23.042	0	1	129780	+		36587	17267	24266	24275	41628	41628					0.1292664075842822
MGLLLLALRLP	11	Unmodified	_MGLLLLALRLP_					0	0	0			REV__ENSG00000112164|ENST00000373256|GLP1R	REV__ENSG00000112164|ENST00000373256|GLP1R	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	605.388671875	2	605.391219	1208.76789	-1.0119	-0.00061261	-1.3081	-0.00079192	-2.32	-0.0014045	605.3903055636187	44.786	1.0425	44.786	44.46	45.502	0					57	25	3	0	0	0	0.77205	1	3251	3251		13.454	0	1	158280	+		36588	17921	24267	24276	41629	41629					0.17185233903933295
MGLLLLALRLP	11	Unmodified	_MGLLLLALRLP_					0	0	0			REV__ENSG00000112164|ENST00000373256|GLP1R	REV__ENSG00000112164|ENST00000373256|GLP1R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.3851928710938	2	605.391219	1208.76789	-1.0444	-0.00063226	-1.2174	-0.00073702	-2.2618	-0.0013693	605.3903942555575	46.528	0.65434	46.524	46.069	46.723	-0.0041618					24	15	2	0	0	0	0.71207	1	3745	3745		19.997	0	1	80327	+		36589	17921	24267	24276	41630	41630					0.17185233903933295
MGLLLLALRLP	11	Unmodified	_MGLLLLALRLP_					0	0	0			REV__ENSG00000112164|ENST00000373256|GLP1R	REV__ENSG00000112164|ENST00000373256|GLP1R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.3900146484375	2	605.391219	1208.76789	0.26185	0.00015852	-2.5775	-0.0015604	-2.3157	-0.0014019	605.389725051937	44.911	0.88356	44.843	44.352	45.235	-0.06863					42	20	3	0	0	0	0.74022	2	3180	3180;3216		5.5578	0	1	391520	+		36590	17921	24267	24276	41631;41632	41631					0.17185233903933295
MGLLPKGPQ	9	Unmodified	_MGLLPKGPQ_					0	0	0			REV__ENSG00000132423|ENST00000254759|COQ3	REV__ENSG00000132423|ENST00000254759|COQ3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	471.24224853515625	2	470.767863	939.521173	-1.5554	-0.00073225	3.5049	0.00165	1.9495	0.00091776	470.769561061561	83.528	1.0004	83.666	83.222	84.222	0.13811					39	22	2	0	0	0	0.20789	1	8117	8117		24.203	2.2429	1	65023	+		36591	19002	24268	24277	41633	41633					0.04899319405069491
MGLLPLLSN	9	Unmodified	_MGLLPLLSN_					0	0	0			REV__ENST00000477487.5_1_16:24815406-24816553:+|nuORF	REV__ENST00000477487.5_1_16:24815406-24816553:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2774353027344	2	479.275521	956.536489	-0.098244	-4.7086E-05	4.0257	0.0019294	3.9274	0.0018823	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.78058	2	8403	8403;8469		30.504	2.6214	1	6799600	+		36592	27357	24269	24278	41634;41635	41634					0.0564818620226788
MGLLPLLSN	9	Unmodified	_MGLLPLLSN_					0	0	0			REV__ENST00000477487.5_1_16:24815406-24816553:+|nuORF	REV__ENST00000477487.5_1_16:24815406-24816553:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27734375	2	479.275521	956.536489	0.53004	0.00025403	3.2196	0.0015431	3.7496	0.0017971	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.78058	1	8336	8336		30.504	5.0535	1	2070000	+		36593	27357	24269	24278	41636	41636					0.0564818620226788
MGLLPLLSN	9	Unmodified	_MGLLPLLSN_					0	0	0			REV__ENST00000477487.5_1_16:24815406-24816553:+|nuORF	REV__ENST00000477487.5_1_16:24815406-24816553:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2774963378906	2	479.275521	956.536489	0.83201	0.00039876	3.0426	0.0014583	3.8747	0.001857	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.78058	2	8752	8752;8776		30.504	5.0535	1	7289200	+		36594	27357	24269	24278	41637;41638	41637					0.0564818620226788
MGLLPLLSN	9	Unmodified	_MGLLPLLSN_					0	0	0			REV__ENST00000477487.5_1_16:24815406-24816553:+|nuORF	REV__ENST00000477487.5_1_16:24815406-24816553:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2774353027344	2	479.275521	956.536489	0.61468	0.0002946	3.1717	0.0015201	3.7864	0.0018147	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.72402	1	7920	7920		38.806	3.6054	1	1802300	+		36595	27357	24269	24278	41639	41639					0.0564818620226788
MGLLPLLSN	9	Unmodified	_MGLLPLLSN_					0	0	0			REV__ENST00000477487.5_1_16:24815406-24816553:+|nuORF	REV__ENST00000477487.5_1_16:24815406-24816553:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2774353027344	2	479.275521	956.536489	0.63867	0.0003061	3.2635	0.0015641	3.9021	0.0018702	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.72402	3	8210	8139;8210;8246		38.806	5.2906	1	6593200	+		36596	27357	24269	24278	41640;41641;41642	41641					0.0564818620226788
MGPLTGSY	8	Unmodified	_MGPLTGSY_					0	0	0		chr10:101132109-101134139|31|19.61|0.06|8.34|+|ENST00000463716|TLX1,TLX1;nc|ENSG00000107807|P31314-2|TLX1;ENSG00000107807|ENST00000370196|TLX1	chr10:101132109-101134139|31|19.61|0.06|8.34|+|ENST00000463716|TLX1,TLX1	chr10:101132109-101134139|31|19.61|0.06|8.34|+|ENST00000463716|TLX1,TLX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1958923339844	2	413.194196	824.37384	0.36856	0.00015229	-1.5039	-0.00062141	-1.1354	-0.00046913	413.19353569569154	84.288	3.3037	84.723	83.664	86.967	0.43538					144	80	2	0	0	0	0.91005	1	9823	9823		42.474	1.9018	1	9340100			36597	61	24270	24279	41643	41643					-0.0453719719973833
MGPQGPPLH	9	Unmodified	_MGPQGPPLH_					0	0	0		ENSG00000136709|ENST00000322313|WDR33	ENSG00000136709|ENST00000322313|WDR33	ENSG00000136709|ENST00000322313|WDR33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.23272705078125	2	467.234187	932.453822	-1.0712	-0.00050052	-1.4784	-0.00069074	-2.5496	-0.0011913	467.2337815717814	69.637	1.4406	69.703	69.254	70.695	0.065506					156	70	4	0	0	0	0.67235	1	6316	6316		42.474	4.6629	1	9146400			36598	4128	24271	24280	41644	41644					-0.015107108058941776
MGPQGPPLH	9	Unmodified	_MGPQGPPLH_					0	0	0		ENSG00000136709|ENST00000322313|WDR33	ENSG00000136709|ENST00000322313|WDR33	ENSG00000136709|ENST00000322313|WDR33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2333068847656	2	467.234187	932.453822	-0.45838	-0.00021417	-1.9039	-0.00088959	-2.3623	-0.0011038	467.23359025373514	64.723	2.0657	65.109	64.482	66.548	0.38615					153	52	5	0	0	0	0.69914	1	6972	6972		40.573	1.5511	1	8112800			36599	4128	24271	24280	41645	41645					-0.015107108058941776
MGPQGPPLH	9	Unmodified	_MGPQGPPLH_					0	0	0		ENSG00000136709|ENST00000322313|WDR33	ENSG00000136709|ENST00000322313|WDR33	ENSG00000136709|ENST00000322313|WDR33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2330322265625	2	467.234187	932.453822	-0.26264	-0.00012271	-2.1411	-0.0010004	-2.4037	-0.0011231	467.23346633413524	64.606	2.155	65.159	64.517	66.672	0.55386					169	56	5	0	0	0	0.64338	1	7078	7078		44.531	7.5026	1	8508300			36600	4128	24271	24280	41646	41646					-0.015107108058941776
MGPYSLGT	8	Unmodified	_MGPYSLGT_					0	0	0		nc|ENSG00000163395|Q86VF2-4|IGFN1;nc|ENSG00000163395|Q86VF2|IGFN1;ENSG00000163395|ENST00000335211|IGFN1	nc|ENSG00000163395|Q86VF2-4|IGFN1	nc|ENSG00000163395|Q86VF2-4|IGFN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1943664550781	2	413.194196	824.37384	-1.8303	-0.00075625	0.64277	0.00026559	-1.1875	-0.00049066	413.19437338858427	78.719	2.8895	78.846	78.411	81.3	0.12695					158	87	2	0	0	0	0.92973	1	7476	7476		50.025	7.5501	1	956620			36601	5793	24272	24281	41647	41647					-0.045371971997155924
MGSACCTH	8	Unmodified	_MGSACCTH_					0	0	0		ENST00000556873.5_1_14:100765191-100765377:-|nuORF	ENST00000556873.5_1_14:100765191-100765377:-|nuORF	ENST00000556873.5_1_14:100765191-100765377:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.14239501953125	2	405.140584	808.266615	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.03	1	112.07	111.57	112.57	0.032707								0	0	0	0.30784	1	13592	13592		14.664	0	1				36602	13757	24273	24282	41648	41648					-0.145188136772731
MGVIRMYF	8	Unmodified	_MGVIRMYF_					0	0	0		ENST00000489973.6_1_13:111545392-111545482:-|nuORF	ENST00000489973.6_1_13:111545392-111545482:-|nuORF	ENST00000489973.6_1_13:111545392-111545482:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7547912597656	2	508.756441	1015.49833	1.4516	0.00073849	-2.7316	-0.0013897	-1.28	-0.00065121	508.7548888969632	49.846	0.6993	50.691	50.395	51.094	0.84501					29	13	3	0	0	0	0.92176	1	4913	4913		46.766	5.9883	1	1081700			36603	12662	24274	24283	41649	41649					-0.008800229840630891
MHDTVSVLHG	10	Unmodified	_MHDTVSVLHG_					0	0	0			REV__ENSG00000100167|ENST00000644076|SEPTIN3	REV__ENSG00000100167|ENST00000644076|SEPTIN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.2647705078125	2	548.266216	1094.51788	-1.6256	-0.00089129	-1.7669	-0.00096873	-3.3926	-0.00186	548.265121455476	39.168	1.0976	39.536	38.843	39.94	0.36797					53	25	3	0	0	0	0.31414	1	3271	3271		71.296	7.0884	1	550160	+		36604	17147	24275	24284	41650	41650					-0.025599754396125718
MHEQYLKHLRD	11	Unmodified	_MHEQYLKHLRD_					0	0	0			REV__ENSG00000151466|ENST00000281142|SCLT1	REV__ENSG00000151466|ENST00000281142|SCLT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	490.9104919433594	3	490.582116	1468.72452	-1.225	-0.00060097	-3.926	-0.001926	-5.151	-0.002527	490.58016877096895	18.022	0.5152	17.943	17.776	18.292	-0.078943					67	21	4	0	0	0	0.76892	1	311	311		17.833	1.3033	1	558750	+		36605	20250	24276	24285	41651	41651					0.008903923887146448
MHFTRLQP	8	Unmodified	_MHFTRLQP_					0	0	0			REV__chr16:69370566-69372269|16|15.81|0.32|5.62|-|1|None,TERF2|1	REV__chr16:69370566-69372269|16|15.81|0.32|5.62|-|1|None,TERF2|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8289184570312	2	515.268561	1028.52257	-0.089757	-4.6249E-05	-4.1666	-0.0021469	-4.2564	-0.0021932	515.2661076795277	83.231	0.7862	83.662	83.212	83.998	0.43108					44	18	3	0	0	0	0.4196	1	9698	9698		31.955	0	1	496290	+		36606	15638	24277	24286	41652	41652					0.009449534938312354
MHFTRLQP	8	Unmodified	_MHFTRLQP_					0	0	0			REV__chr16:69370566-69372269|16|15.81|0.32|5.62|-|1|None,TERF2|1	REV__chr16:69370566-69372269|16|15.81|0.32|5.62|-|1|None,TERF2|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	515.268561	1028.52257	0.96454	0.000497	-2.7324	-0.0014079	-1.7679	-0.00091093	515.2678249718095	83.722	0.1758	83.652	83.586	83.762	-0.069313	0.0067791	0.0013257	NaN	31.955	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17888	+		36607	15638	24277	24286							0.009449534938312354
MHGHLLVSLP	10	Unmodified	_MHGHLLVSLP_					0	0	0			REV__ENST00000481445.1_1_X:77158229-77160684:+|nuORF	REV__ENST00000481445.1_1_X:77158229-77160684:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3062133789062	2	552.305144	1102.59573	1.2817	0.0007079	0.93985	0.00051908	2.2216	0.001227	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.86452	1	9715	9715		30.504	0	1	1712700	+		36608	27440	24278	24287	41653	41653					0.04854082216434108
MHHIYVKG	8	Unmodified	_MHHIYVKG_					0	0	0			REV__ENST00000476417.5_1_10:7615057-7659255:-|nuORF	REV__ENST00000476417.5_1_10:7615057-7659255:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.3887023925781	2	492.75783	983.501106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.602	1	67.153	66.653	67.653	0.55071								0	0	0	0.29498	1	7296	7296		26.796	1.3459	1		+		36609	18533	24279	24288	41654	41654					0.008695684651229385
MHHYRESRT	9	Unmodified	_MHHYRESRT_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	609.287109375	2	608.785638	1215.55672	0.4097	0.00024942	-3.0654	-0.0018662	-2.6557	-0.0016168	608.7830450701787	59.037	1.8079	59.006	58.103	59.911	-0.030888					62	51	2	0	0	0	0.44421	1	5498	5498		54.776	8.3195	1	200150	+		36610	16905	24280	24289	41655	41655					-0.0424325008523283
MHHYRESRT	9	Unmodified	_MHHYRESRT_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.784912109375	2	608.785638	1215.55672	-1.6114	-0.000981	-1.0998	-0.00066953	-2.7112	-0.0016505	608.7842044463049	58.895	1.1718	58.929	58.521	59.692	0.033905					46	33	2	0	0	0	0.78983	1	5446	5446		27.882	0	1	181870	+		36611	16905	24280	24289	41656	41656					-0.0424325008523283
MHIQKNAD	8	Unmodified	_MHIQKNAD_					0	0	0		ENSG00000152705|ENST00000282611|CATSPER3	ENSG00000152705|ENST00000282611|CATSPER3	ENSG00000152705|ENST00000282611|CATSPER3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2774353027344	2	478.734551	955.45455	0.28096	0.0001345	3.8471	0.0018417	4.128	0.0019762	478.7364006133296	82.041	0.43045	82.468	82.197	82.627	0.42646					13	10	2	0	0	0	0.4196	1	9461	9461		25.45	0	1	72123			36612	5195	24281	24290	41657	41657					-0.02495916156851763
MHLYPADFR	9	Unmodified	_MHLYPADFR_					0	0	0		ENST00000482153.1_1_10:135122453-135123793:+|nuORF;ENSG00000198546|ENST00000361518|ZNF511;nc|ENSG00000198546|Q8NB15-1|ZNF511	ENST00000482153.1_1_10:135122453-135123793:+|nuORF	ENST00000482153.1_1_10:135122453-135123793:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8428955078125	2	575.279126	1148.5437	0.59957	0.00034492	2.3295	0.0013401	2.929	0.001685	575.2822176444394	92.121	0.80654	92.342	91.937	92.743	0.22157					20	18	2	0	0	0	0.20789	1	9358	9358		38.806	12.113	1	39256			36613	8283	24282	24291	41658	41658					-0.024630811973111122
MHQFLSPK	8	Unmodified	_MHQFLSPK_					0	0	0			REV__ENSG00000182050|ENST00000611864|MGAT4C	REV__ENSG00000182050|ENST00000611864|MGAT4C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.6976318359375	2	494.257662	986.500772	0.086227	4.2618E-05	2.0921	0.001034	2.1783	0.0010767	494.25848474938596	31.119	0.81931	31.123	30.71	31.529	0.0037212					28	18	2	0	0	0	0.4196	1	2103	2103		31.955	0	1	284870	+		36614	22495	24283	24292	41659	41659					0.006981487452549118
MHQLEKTT	8	Unmodified	_MHQLEKTT_					0	0	0		ENST00000544643.5_1_16:30771925-30772616:-|nuORF;ENST00000546006.5_1_16:30771925-30773129:-|nuORF;nc|ENSG00000196118|A1A4V9-4|CFAP119;nc|ENSG00000196118|A1A4V9-2|CFAP119;ENSG00000196118|ENST00000543610|CFAP119	ENST00000544643.5_1_16:30771925-30772616:-|nuORF	ENST00000544643.5_1_16:30771925-30772616:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3009033203125	2	494.250034	986.485516	-0.58933	-0.00029127	0.056653	2.8001E-05	-0.53267	-0.00026327	494.2501718193493	97.606	0.38681	97.835	97.653	98.04	0.22851					11	8	2	0	0	0	0.4196	1	10121	10121		42.396	11.892	1	23769			36615	8011	24284	24293	41660	41660					-0.008267628425983276
MHQRLEHKY	9	Unmodified	_MHQRLEHKY_					0	0	0		ENSG00000171940|ENST00000371471|ZNF217	ENSG00000171940|ENST00000371471|ZNF217	ENSG00000171940|ENST00000371471|ZNF217	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	622.70556640625	2	621.314032	1240.61351	-0.53876	-0.00033474	0.14584	9.0611E-05	-0.39292	-0.00024413	621.3138153690339	68.785	0.47818	68.85	68.627	69.105	0.065506					44	20	3	0	0	0	0.78983	1	6196	6196		27.882	2.3082	1	147770			36616	6725	24285	24294	41661	41661					0.0028279747130000032
MHRDLNHR	8	Unmodified	_MHRDLNHR_					0	0	0			REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.7696533203125	2	539.769791	1077.52503	-0.49951	-0.00026962	-1.2223	-0.00065975	-1.7218	-0.00092937	539.7689823665951	77.709	0.95242	78.277	77.879	78.831	0.56836					58	22	4	0	0	0	0.92457	1	8911	8911		47.916	5.5195	1	1958700	+		36617	20098	24286	24295	41662	41662					-0.010631980485186432
MHRFFPHRQVD	11	Unmodified	_MHRFFPHRQVD_					0	0	0			REV__ENST00000531765.2_1_11:67201468-67201970:+|nuORF	REV__ENST00000531765.2_1_11:67201468-67201970:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.57952880859375	3	490.578817	1468.71462	0.23176	0.0001137	1.0166	0.00049874	1.2484	0.00061244	490.57933719725315	18.437	1.0345	17.96	17.703	18.738	-0.47694					60	22	5	0	0	0	0.72374	1	401	401		27.644	6.6117	1	1434900	+		36618	22078	24287	24296	41663	41663					-0.0009875082600956375
MHRGRRRRRRR	11	Unmodified	_MHRGRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3280639648438	3	531.654048	1591.94031	2.2378	0.0011897	3.1974	0.0016999	5.4352	0.0028897	531.9904580975297	104.83	0.59438	104.98	104.78	105.38	0.15583					22	15	2	0	0	0	0.18331	1	12795	12795		9.2118	7.6888	1	114590	+		36619	24647	24288	24297	41664	41664					0.16802055927223591
MHRGRRRRRRR	11	Unmodified	_MHRGRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.6559448242188	3	531.654048	1591.94031	4.0608	0.002159	0.92219	0.00049028	4.983	0.0026492	531.6544730597839	105.98	0.51363	106.17	105.82	106.34	0.18648					19	16	2	0	0	0	0.89215	1	12976	12976		3.2113	0.18535	1	143300	+		36620	24647	24288	24297	41665	41665					0.16802055927223591
MHRGRRRRRRR	11	Unmodified	_MHRGRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	531.654048	1591.94031	-0.030506	-1.6218E-05	4.983	0.0026492	4.9525	0.002633	531.6564127574367	105.02	0.59116	105.18	104.92	105.51	0.15925	0.041124	0.00020892	NaN	9.2118	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128580	+		36621	24647	24288	24297							0.16802055927223591
MHRGRRRRRRR	11	Unmodified	_MHRGRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	531.654048	1591.94031	-1.5119	-0.00080383	6.882	0.0036589	5.3701	0.002855	531.9922774486595	105.18	0.52928	105.26	104.93	105.46	0.073112	0.11752	0.0032378	NaN	9.2118	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50654	+		36622	24647	24288	24297							0.16802055927223591
MHRGVLVRQL	10	Unmodified	_MHRGVLVRQL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8583984375	2	604.855867	1207.69718	0.44628	0.00026994	3.7521	0.0022695	4.1984	0.0025394	604.8581987085885	79.369	1.3178	79.785	78.892	80.21	0.41621					66	30	3	0	0	0	0.36572	2	9096	9082;9096		54.776	9.7541	1	692170			36623	2675	24289	24298	41666;41667	41667					0.10163953639016654
MHRGVLVRQL	10	Unmodified	_MHRGVLVRQL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.859130859375	2	604.855867	1207.69718	0.29518	0.00017854	4.3581	0.002636	4.6533	0.0028146	604.8584188713688	80.866	0.85687	81.288	80.891	81.748	0.4215					70	20	4	0	0	0	0.5442	3	9315	9290;9315;9327		35.618	0	1	4835500			36624	2675	24289	24298	41668;41669;41670	41669					0.10163953639016654
MHRGVLVRQL	10	Unmodified	_MHRGVLVRQL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8583374023438	2	604.855867	1207.69718	0.22273	0.00013472	4.2582	0.0025756	4.481	0.0027103	604.8583327420461	82.105	1.1205	82.531	81.753	82.873	0.42645					96	27	4	0	0	0	0.49268	2	9488	9435;9488		27.882	13.239	1	3330300			36625	2675	24289	24298	41671;41672	41672					0.10163953639016654
MHRGVLVRQL	10	Unmodified	_MHRGVLVRQL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8582153320312	2	604.855867	1207.69718	0.14945	9.0393E-05	4.2877	0.0025934	4.4371	0.0026838	604.8583429415354	82.706	1.5002	83.137	82.878	84.378	0.43108					99	35	3	0	0	0	0.63899	1	9584	9584		27.882	10.414	1	1833400			36626	2675	24289	24298	41673	41673					0.10163953639016654
MHRGVLVRQL	10	Unmodified	_MHRGVLVRQL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8582763671875	2	604.855867	1207.69718	0.082073	4.9642E-05	4.3287	0.0026183	4.4108	0.0026679	604.8584757159402	82.084	1.3276	82.558	81.718	83.045	0.47383					56	29	2	0	0	0	0.60985	3	9520	9413;9486;9520		27.882	0	1	3105600			36627	2675	24289	24298	41674;41675;41676	41676					0.10163953639016654
MHRGVLVRQL	10	Unmodified	_MHRGVLVRQL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8585205078125	2	604.855867	1207.69718	0.10436	6.3124E-05	4.2568	0.0025748	4.3612	0.0026379	604.8584167241106	82.662	2.6581	83.136	82.878	85.536	0.47383					100	64	2	0	0	0	0.60985	1	9614	9614		29.15	8.2026	1	1770100			36628	2675	24289	24298	41677	41677					0.10163953639016654
MHRGVLVRQL	10	Unmodified	_MHRGVLVRQL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	604.855867	1207.69718	-0.48349	-0.00029244	3.8808	0.0023473	3.3973	0.0020549	604.8584451366554	83.291	1.292	83.358	82.955	84.247	0.066719	-0.059424	-0.00022804	NaN	29.15	41	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85128			36629	2675	24289	24298							0.10163953639016654
MHRGVLVRQL	10	Unmodified	_MHRGVLVRQL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	604.855867	1207.69718	1.0656	0.00064452	2.5279	0.001529	3.5935	0.0021736	604.8575003139701	83.551	1.0257	83.482	83.085	84.11	-0.069313	0.064335	-0.0018646	NaN	29.15	30	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73226			36630	2675	24289	24298							0.10163953639016654
MHRGVLVRQL	10	Unmodified	_MHRGVLVRQL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	604.855867	1207.69718	-0.49489	-0.00029934	3.758	0.0022731	3.2632	0.0019737	604.8586466752703	83.569	1.2577	83.629	83.026	84.284	0.05925	0.21148	-0.00037649	NaN	29.15	43	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42267			36631	2675	24289	24298							0.10163953639016654
MHRGVLVRQL	10	Unmodified	_MHRGVLVRQL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	604.855867	1207.69718	1.0214	0.00061781	2.7921	0.0016888	3.8135	0.0023066	604.8576170025457	83.404	1.0295	83.569	83.319	84.348	0.16509	0.1517	-0.001545	NaN	29.15	40	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156890			36632	2675	24289	24298							0.10163953639016654
MHRGVLVRQL	10	Unmodified	_MHRGVLVRQL_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	604.855867	1207.69718	0.74944	0.0004533	2.7406	0.0016576	3.49	0.002111	604.8577803981198	83.463	0.77713	83.61	83.351	84.128	0.14694	0.19303	-0.0016073	NaN	29.15	32	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140980			36633	2675	24289	24298							0.10163953639016654
MHRILMLVRP	10	Unmodified	_MHRILMLVRP_					0	0	0		ENSG00000170927|ENST00000371117|PKHD1;nc|ENSG00000170927|P08F94-2|PKHD1	ENSG00000170927|ENST00000371117|PKHD1	ENSG00000170927|ENST00000371117|PKHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3688354492188	2	633.370295	1264.72604	1.4714	0.00093196	-3.2974	-0.0020885	-1.8259	-0.0011565	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.8608	2	10037	10037;10085		34.173	15.071	1	11430000			36634	6625	24290	24299	41678;41679	41678					0.1042635494377464
MHRLKHEVPL	10	Unmodified	_MHRLKHEVPL_					0	0	0		nc|ENSG00000196323|Q8NCP5-2|ZBTB44	nc|ENSG00000196323|Q8NCP5-2|ZBTB44	nc|ENSG00000196323|Q8NCP5-2|ZBTB44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.3598022460938	2	630.355699	1258.69685	1.3322	0.00083973	3.7712	0.0023772	5.1034	0.0032169	630.3578781034934	46.804	0.71899	46.823	46.565	47.284	0.018967					42	19	3	0	0	0	0.5442	1	3457	3457		40.778	0.71999	1	498040			36635	15179	24291	24300	41680	41680					0.07784533919129899
MHRYRGKR	8	Unmodified	_MHRYRGKR_					0	0	0		ENST00000518740.5_2_3:126326756-126328052:-|nuORF	ENST00000518740.5_2_3:126326756-126328052:-|nuORF	ENST00000518740.5_2_3:126326756-126328052:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3065795898438	2	552.303801	1102.59305	0.78015	0.00043088	3.9495	0.0021813	4.7297	0.0026122	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.87922	1	9285	9285		31.955	2.8053	1	1841700			36636	13122	24292	24301	41681	41681					0.045856716021489774
MHSGSKRR	8	Unmodified	_MHSGSKRR_					0	0	0			REV__ENST00000477837.5_1_1:157668289-157670322:-|nuORF	REV__ENST00000477837.5_1_1:157668289-157670322:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.75274658203125	2	479.75361	957.492667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.494	1	55.524	55.024	56.024	0.030838								0	0	0	0.29245	1	4984	4984		30.504	0	1		+		36637	27365	24293	24302	41682	41682					0.012220145484889144
MHVVAKIKS	9	Unmodified	_MHVVAKIKS_					0	0	0		ENST00000465070.5_1_2:145271084-145271330:-|nuORF	ENST00000465070.5_1_2:145271084-145271330:-|nuORF	ENST00000465070.5_1_2:145271084-145271330:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8010559082031	2	506.802237	1011.58992	0.18992	9.6251E-05	-2.4391	-0.0012361	-2.2491	-0.0011399	506.80099089303076	46.969	1.4152	46.955	46.233	47.648	-0.013817					58	38	2	0	0	0	0.7932	1	3868	3868		24.203	3.7209	1	254450			36638	12102	24294	24303	41683	41683					0.08458983704781531
MIAKHLAAVDS	11	Unmodified	_MIAKHLAAVDS_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	579.6347045898438	2	578.313166	1154.61178	-0.77198	-0.00044645	1.5724	0.00090937	0.80046	0.00046292	578.3136706003854	71.013	1.0632	71.013	70.76	71.823	0					93	49	3	0	0	0	0.70737	1	6338	6338		30.318	0	1	146110	+		36639	19182	24295	24304	41684	41684					0.04065743662704335
MIALALAV	8	Unmodified	_MIALALAV_					0	0	0		ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.249755859375	2	401.248775	800.482997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.22	1	111.26	110.76	111.76	0.041832								0	0	0	0.30553	1	13460	13460		16.705	0	1				36640	7435	24296	24305	41685	41685					0.07477433490407748
MIAVFTLTGA	10	Unmodified	_MIAVFTLTGA_					0	0	0		ENSG00000070019|ENST00000261170|GUCY2C	ENSG00000070019|ENST00000261170|GUCY2C	ENSG00000070019|ENST00000261170|GUCY2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.282470703125	2	512.280803	1022.54705	-1.5312	-0.00078441	2.5811	0.0013222	1.0498	0.00053782	512.2820384248688	86.195	3.9563	86.353	85.285	89.241	0.15851					164	92	2	0	0	0	0.81018	1	8430	8430		38.806	0	1	356130			36641	1230	24297	24306	41686	41686					0.03668168856700049
MICHTLPLP	9	Unmodified	_MICHTLPLP_					0	0	0		ENSG00000102974|ENST00000264010|CTCF;ENST00000566078.1_1_16:67644735-67645545:+|nuORF	ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7685546875	2	512.769548	1023.52454	-0.5023	-0.00025756	-0.8118	-0.00041627	-1.3141	-0.00067383	512.7690290219534	48.59	1.7173	49.06	48.082	49.799	0.46941					100	42	5	0	0	0	0.32449	1	4718	4718		62.978	5.1671	1	5404400			36642	2039	24298	24307	41687	41687					0.013722461874067449
MICHTLPLP	9	Unmodified	_MICHTLPLP_					0	0	0		ENSG00000102974|ENST00000264010|CTCF;ENST00000566078.1_1_16:67644735-67645545:+|nuORF	ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.7684936523438	2	512.769548	1023.52454	0.29414	0.00015083	-1.5453	-0.00079238	-1.2512	-0.00064156	512.7686314865582	48.401	1.6422	49.305	48.411	50.053	0.90424					104	40	4	0	0	0	0.3636	1	4707	4707		60.294	1.512	1	5283800			36643	2039	24298	24307	41688	41688					0.013722461874067449
MIDLLLALLLN	11	Unmodified	_MIDLLLALLLN_					0	0	0			REV__ENSG00000160539|ENST00000372264|PLPP7	REV__ENSG00000160539|ENST00000372264|PLPP7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.59136962890625	3	414.589437	1240.74648	0.66329	0.00027499	3.7685	0.0015624	4.4317	0.0018374	414.59086540346516	32.474	0.93912	32.6	32.289	33.228	0.12643					54	21	4	0	0	0	0.60687	1	2269	2269		43.651	13.082	1	671550	+		36644	20723	24299	24308	41689	41689					0.13573804084580843
MIDLTTGDGH	10	Unmodified	_MIDLTTGDGH_					0	0	0			REV__ENST00000531486.1_1_17:45681241-45696545:+|nuORF	REV__ENST00000531486.1_1_17:45681241-45696545:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2412719726562	2	530.242406	1058.47026	-0.033627	-1.783E-05	-2.5928	-0.0013748	-2.6264	-0.0013926	530.240968765566	111.53	2.3024	111.47	110.12	112.42	-0.059937					158	81	3	0	0	0	0.85934	1	12093	12093		35.618	2.8059	1	182550	+		36645	19669	24300	24309	41690	41690					-0.05663674430456922
MIDRFNLS	8	Unmodified	_MIDRFNLS_					0	0	0			REV__ENSG00000169710|ENST00000306749|FASN	REV__ENSG00000169710|ENST00000306749|FASN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.24932861328125	2	498.252577	994.490601	-0.99209	-0.00049431	-3.1151	-0.0015521	-4.1072	-0.0020464	498.25142789231467	84.759	2.4523	84.759	83.586	86.038	0					132	57	3	0	0	0	0.85277	1	7952	7952		25.45	0.94616	1	112180	+		36646	21595	24301	24310	41691	41691					-0.006864589799761234
MIEQLIKTT	9	Unmodified	_MIEQLIKTT_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.806640625	2	538.804642	1075.59473	0.74987	0.00040403	3.065	0.0016514	3.8148	0.0020555	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.7932	1	9034	9034		20.947	0	1	840570			36647	4137	24302	24311	41692	41692					0.0599582305687818
MIFLINIDP	9	Unmodified	_MIFLINIDP_					0	0	0		ENSG00000198104|ENST00000641644|OR2T6	ENSG00000198104|ENST00000641644|OR2T6	ENSG00000198104|ENST00000641644|OR2T6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.2954711914062	2	538.296453	1074.57835	-0.33111	-0.00017823	-2.5322	-0.0013631	-2.8633	-0.0015413	538.2950923314316	62.814	1.1395	63.368	62.907	64.046	0.55449					67	26	4	0	0	0	0.41566	1	6791	6791		56.721	5.5284	1	394730			36648	8239	24303	24312	41693	41693					0.044047418907666724
MIFLPLVK	8	Unmodified	_MIFLPLVK_					0	0	0			REV__nc|ENSG00000158865|Q8WWX8-3|SLC5A11	REV__nc|ENSG00000158865|Q8WWX8-3|SLC5A11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.28094482421875	2	480.801174	959.587796	-0.78578	-0.00037781	0.50106	0.00024091	-0.28473	-0.0001369	480.8013644374908	98.998	1.8638	99.221	98.475	100.34	0.22263					65	43	2	0	0	0	0.4196	1	10343	10343		14.664	5.8418	1	210600	+		36649	20627	24304	24313	41694	41694					0.10638554966976699
MIFVGRDDC	9	Unmodified	_MIFVGRDDC_					0	0	0		ENST00000523581.1_1_1:243384995-243388582:-|nuORF;ENST00000522522.5_1_1:243375035-243388582:-|nuORF;nc|ENSG00000143702|Q5SW79-2|CEP170;nc|ENSG00000143702|Q5SW79-3|CEP170;ENSG00000143702|ENST00000366542|CEP170	ENST00000523581.1_1_1:243384995-243388582:-|nuORF	ENST00000523581.1_1_1:243384995-243388582:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.2369995117188	2	528.23607	1054.45759	0.0061539	3.2507E-06	3.1284	0.0016525	3.1346	0.0016558	528.2378138616386	70.37	0.79037	70.917	70.617	71.407	0.54694					37	19	2	0	0	0	0.36616	1	7823	7823		60.118	10.677	1	703530			36650	4658	24305	24314	41695	41695					-0.06746409094353112
MIFYIFVN	8	Unmodified	_MIFYIFVN_					0	0	0			REV__nc|ENSG00000170340|Q9NY97-2|B3GNT2	REV__nc|ENSG00000170340|Q9NY97-2|B3GNT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.800048828125	2	523.772614	1045.53067	-0.35012	-0.00018338	-1.7192	-0.00090045	-2.0693	-0.0010838	523.7715817958979	60.118	0.50011	60.509	60.254	60.754	0.39077					20	13	2	0	0	0	0.4196	1	6326	6326		31.579	0	1	365670	+		36651	21650	24306	24315	41696	41696					0.009730876905905461
MIGKKLFTKQ	10	Unmodified	_MIGKKLFTKQ_					0	0	0		nc|ENSG00000136143|Q9P2R7-2|SUCLA2;ENSG00000136143|ENST00000646932|SUCLA2	nc|ENSG00000136143|Q9P2R7-2|SUCLA2	nc|ENSG00000136143|Q9P2R7-2|SUCLA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.8566284179688	2	597.357376	1192.7002	1.5032	0.00089792	-3.6858	-0.0022018	-2.1827	-0.0013038	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.85438	1	10911	10911		16.473	0.83134	1	1501500			36652	4089	24307	24316	41697	41697					0.11155783973163125
MIGKKLFTKQ	10	Unmodified	_MIGKKLFTKQ_					0	0	0		nc|ENSG00000136143|Q9P2R7-2|SUCLA2;ENSG00000136143|ENST00000646932|SUCLA2	nc|ENSG00000136143|Q9P2R7-2|SUCLA2	nc|ENSG00000136143|Q9P2R7-2|SUCLA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.358642578125	2	597.357376	1192.7002	1.8736	0.0011192	-1.1384	-0.00068003	0.73516	0.00043915	597.3562887169959	99.941	2.3701	100.27	99.147	101.52	0.33294					172	60	4	0	0	0	0.85251	1	12046	12046		19.997	0.89325	1	4830100			36653	4089	24307	24316	41698	41698					0.11155783973163125
MIGLAWLIS	9	Unmodified	_MIGLAWLIS_					0	0	0		ENSG00000184984|ENST00000383263|CHRM5	ENSG00000184984|ENST00000383263|CHRM5	ENSG00000184984|ENST00000383263|CHRM5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.7731628417969	2	502.285889	1002.55722	-0.76041	-0.00038194	2.337	0.0011738	1.5765	0.00079188	502.2872507371494	49.197	0.651	49.656	49.301	49.952	0.45983					22	15	2	0	0	0	0.20789	1	4765	4765		42.474	0.078325	1	399950			36654	7661	24308	24317	41699	41699					0.05604776581913029
MIGLAWLVSFV	11	Unmodified	_MIGLAWLVSFV_					0	0	0		nc|ENSG00000168539|P11229-2|CHRM1;ENSG00000168539|ENST00000306960|CHRM1	nc|ENSG00000168539|P11229-2|CHRM1	nc|ENSG00000168539|P11229-2|CHRM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.3458862304688	2	618.346477	1234.6784	2.5351	0.0015676	-3.5164	-0.0021744	-0.98135	-0.00060681	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.60283	1	10576	10576		44.117	10.195	1	980120			36655	6410	24309	24318	41700	41700					0.07044979224565395
MIGLAWLVSFV	11	Unmodified	_MIGLAWLVSFV_					0	0	0		nc|ENSG00000168539|P11229-2|CHRM1;ENSG00000168539|ENST00000306960|CHRM1	nc|ENSG00000168539|P11229-2|CHRM1	nc|ENSG00000168539|P11229-2|CHRM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	618.3468017578125	2	618.346477	1234.6784	1.8217	0.0011265	-2.553	-0.0015786	-0.73124	-0.00045216	618.3447943757376	97.603	2.4577	97.988	96.782	99.24	0.38548					159	59	3	0	0	0	0.68378	1	11713	11713		34.173	8.5985	1	976090			36656	6410	24309	24318	41701	41701					0.07044979224565395
MIGMQESF	8	Unmodified	_MIGMQESF_					0	0	0			REV__nc|ENSG00000174611|Q8NBH2-3|KY	REV__nc|ENSG00000174611|Q8NBH2-3|KY	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7693176269531	2	471.706614	941.398675	0.011868	5.5981E-06	0.06833	3.2232E-05	0.080198	3.783E-05	471.7067723805297	50.522	0.26186	50.52	50.305	50.566	-0.0020447					7	5	2	0	0	0	0.4196	1	4283	4283		23.042	1.0826	1	23354	+		36657	22006	24310	24319	41702	41702					-0.0743688538866536
MIGPLRTN	8	Unmodified	_MIGPLRTN_					0	0	0			REV__nc|ENSG00000077327|O75602-2|SPAG6	REV__nc|ENSG00000077327|O75602-2|SPAG6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2480163574219	2	451.249837	900.485122	-0.60944	-0.00027501	-1.6864	-0.00076097	-2.2958	-0.001036	451.24890898084885	67.67	1.2739	67.634	67.25	68.524	-0.035698					111	49	3	0	0	0	0.88601	1	6487	6487		34.173	0.65696	1	185140	+		36658	16745	24311	24320	41703	41703					0.03089862228216589
MIGRCFVLS	9	Unmodified	_MIGRCFVLS_					0	0	0		nc|ENSG00000135424|Q13683-9|ITGA7;ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683|ITGA7;nc|ENSG00000135424|Q13683-3|ITGA7;nc|ENSG00000135424|Q13683-13|ITGA7;ENST00000553276.1_1_12:56094596-56094905:-|nuORF	nc|ENSG00000135424|Q13683-9|ITGA7	nc|ENSG00000135424|Q13683-9|ITGA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.2704467773438	2	513.267173	1024.51979	-1.151	-0.00059076	3.8347	0.0019682	2.6837	0.0013775	513.2690269456646	76.087	0.70016	76.176	75.74	76.44	0.089363					38	21	3	0	0	0	0.62081	1	7080	7080		45.952	1.8352	1	120320			36659	4017	24312	24321	41704	41704					0.00851362044659254
MIIAILLFQ	9	Unmodified	_MIIAILLFQ_					0	0	0		ENSG00000088782|ENST00000382388|DEFB127	ENSG00000088782|ENST00000382388|DEFB127	ENSG00000088782|ENST00000382388|DEFB127	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.329345703125	2	531.325014	1060.63547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.98	1	106.17	105.67	106.67	0.18647								0	0	0	0.31088	1	12966	12966		26.796	0	1				36660	1594	24313	24322	41705	41705					0.1075820916714747
MIILFLPF	8	Unmodified	_MIILFLPF_					0	0	0			REV__nc|ENSG00000185104|Q9UNN5-2|FAF1	REV__nc|ENSG00000185104|Q9UNN5-2|FAF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.7615966796875	2	497.295725	992.576897	-1.5591	-0.00077532	-0.56523	-0.00028109	-2.1243	-0.0010564	497.29533824469047	44.047	1.0062	44.835	44.398	45.404	0.78792					28	24	2	0	0	0	0.4196	1	4017	4017		33.493	0	1	302780	+		36661	22737	24314	24323	41706	41706					0.08031152592673152
MIITFWLPQ	9	Unmodified	_MIITFWLPQ_					0	0	0		ENSG00000198840|ENST00000361227|MT-ND3	ENSG00000198840|ENST00000361227|MT-ND3	ENSG00000198840|ENST00000361227|MT-ND3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2689819335938	2	574.81227	1147.60999	-1.0053	-0.00057784	-4.3063	-0.0024753	-5.3116	-0.0030532	574.8095781832837	74.156	0.74258	74.547	74.29	75.033	0.3911					29	17	2	0	0	0	0.20115	1	8347	8347		84.916	13.62	1	191360			36662	8350	24315	24324	41707	41707					0.04208734644726064
MIITKSGRR	9	Unmodified	_MIITKSGRR_					0	0	0		ENST00000492961.1_1_7:35271114-35293240:-|nuORF;ENSG00000164532|ENST00000408931|TBX20	ENST00000492961.1_1_7:35271114-35293240:-|nuORF	ENST00000492961.1_1_7:35271114-35293240:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3185424804688	2	531.316043	1060.61753	1.7702	0.00094052	4.007	0.002129	5.7771	0.0030695	531.3180188955155	94.734	1.4927	95.166	94.713	96.206	0.4324					93	35	4	0	0	0	0.78058	1	11327	11327		30.504	1.3541	1	2051100			36663	5973	24316	24325	41708	41708					0.089648869650091
MIKAVRGG	8	Unmodified	_MIKAVRGG_					0	0	0		ENSG00000078070|ENST00000265594|MCCC1;ENST00000495767.5_1_3:182740340-182790239:-|nuORF;ENST00000466650.5_1_3:182788929-182817286:-|nuORF	ENSG00000078070|ENST00000265594|MCCC1	ENSG00000078070|ENST00000265594|MCCC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2252502441406	2	416.247098	830.479642	1.0591	0.00044086	-3.5175	-0.0014641	-2.4584	-0.0010233	416.2455677398507	54.615	1.5078	55.022	53.944	55.452	0.40663					56	35	2	0	0	0	0.4196	1	5552	5552		26.796	19.603	1	107080			36664	1390	24317	24326	41709	41709					0.05762183436399937
MIKGVTLVSRC	11	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))IKGVTLVSRC(Carbamidomethyl (C))_	MIKGVTLVSRC(1)	M(1)IKGVTLVSRC	MIKGVTLVSRC(53)	M(53)IKGVTLVSRC	0	1	1		ENST00000514842.5_1_4:39459094-39460113:-|nuORF	ENST00000514842.5_1_4:39459094-39460113:-|nuORF	ENST00000514842.5_1_4:39459094-39460113:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.347900390625	2	640.346683	1278.67881	-1.1585	-0.00074186	1.1373	0.00072826	-0.021245	-1.3604E-05	640.3471961992259	102.97	0.59128	103.08	102.79	103.39	0.11495					48	14	4	0	0	0	0.48529	1	10811	10811		52.937	11.51	1	4755400			36665	13071	24318	24327	41710	41710	171	195			0.05062030882163526
MIKGVTLVSRC	11	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))IKGVTLVSRC(Carbamidomethyl (C))_	MIKGVTLVSRC(1)	M(1)IKGVTLVSRC	MIKGVTLVSRC(50)	M(50)IKGVTLVSRC	0	1	1		ENST00000514842.5_1_4:39459094-39460113:-|nuORF	ENST00000514842.5_1_4:39459094-39460113:-|nuORF	ENST00000514842.5_1_4:39459094-39460113:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.345703125	2	640.346683	1278.67881	1.7833	0.0011419	-2.064	-0.0013217	-0.28072	-0.00017976	640.3453874628556	103.41	0.76866	103.63	103.42	104.19	0.22556					52	18	4	0	0	0	0.53361	1	12543	12543		49.536	6.6718	1	7100500			36666	13071	24318	24327	41711	41711	171	195			0.05062030882163526
MIKITKLAK	9	Unmodified	_MIKITKLAK_					0	0	0			REV__ENSG00000114346|ENST00000392692|ECT2	REV__ENSG00000114346|ENST00000392692|ECT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.303466796875	2	523.343738	1044.67292	-0.17586	-9.2037E-05	-3.9259	-0.0020546	-4.1018	-0.0021466	523.3416912492884	88.761	0.16927	88.968	88.873	89.043	0.2073					5	3	2	0	0	0	0.20789	1	8836	8836		21.96	4.5949	1	26057	+		36667	18040	24319	24328	41712	41712					0.1523730043275009
MIKLLLFME	9	Unmodified	_MIKLLLFME_					0	0	0		ENST00000454308.5_1_7:30639638-30640719:+|nuORF	ENST00000454308.5_1_7:30639638-30640719:+|nuORF	ENST00000454308.5_1_7:30639638-30640719:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.2638549804688	2	569.324156	1136.63376	0.99954	0.00056906	-2.4179	-0.0013766	-1.4184	-0.00080751	569.3228980208908	18.184	0.36685	17.562	17.355	17.722	-0.62141					12	7	2	0	0	0	0.20789	1	369	369		30.504	3.7075	1	28628			36668	11941	24320	24329	41713	41713					0.07090832086896626
MIKLTHGT	8	Unmodified	_MIKLTHGT_					0	0	0			REV__ENSG00000112159|ENST00000369393|MDN1	REV__ENSG00000112159|ENST00000369393|MDN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7543029785156	2	450.752213	899.489873	-0.14159	-6.3823E-05	4.4024	0.0019844	4.2608	0.0019205	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.92457	1	7686	7686		47.916	5.4411	1	109620	+		36669	17920	24321	24330	41714	41714					0.036107463709754484
MILGLVVTLS	10	Unmodified	_MILGLVVTLS_					0	0	0		ENSG00000197993|ENST00000355265|KEL;ENST00000479768.6_1_7:142643674-142659293:-|nuORF	ENSG00000197993|ENST00000355265|KEL	ENSG00000197993|ENST00000355265|KEL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3035278320312	2	523.319928	1044.6253	-0.17434	-9.1238E-05	0.16037	8.3925E-05	-0.013973	-7.3123E-06	523.3199702733331	88.532	0.24567	88.739	88.628	88.873	0.20731					12	5	3	0	0	0	0.37624	1	8789	8789		10.265	0	1	204160			36670	8224	24322	24331	41715	41715					0.10477601441925799
MILGLVVTLS	10	Unmodified	_MILGLVVTLS_					0	0	0		ENSG00000197993|ENST00000355265|KEL;ENST00000479768.6_1_7:142643674-142659293:-|nuORF	ENSG00000197993|ENST00000355265|KEL	ENSG00000197993|ENST00000355265|KEL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.319928	1044.6253	-1.539	-0.0008054	2.5994	0.0013603	1.0604	0.00055492	523.3218524205292	89.587	0.87077	89.763	89.215	90.086	0.1758					36	19	3	0	0	0	0.37624	1	8895	8895		29.15	0	1	67673			36671	8224	24322	24331	41716	41716					0.10477601441925799
MILGVEDAKSA	11	Unmodified	_MILGVEDAKSA_					0	0	0			REV__ENSG00000111249|ENST00000261726|CUX2	REV__ENSG00000111249|ENST00000261726|CUX2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.32958984375	2	567.297181	1132.57981	-1.3959	-0.00079188	0.6178	0.00035047	-0.77809	-0.00044141	567.297279699895	92.85	0.24492	93.043	92.862	93.107	0.19239					6	5	2	0	0	0	0.17502	1	9346	9346		22.58	4.3176	1	43514	+		36672	17854	24323	24332	41717	41717					0.018823311888581884
MILKGKFNVQ	10	Unmodified	_MILKGKFNVQ_					0	0	0			REV__ENSG00000136628|ENST00000366923|EPRS1	REV__ENSG00000136628|ENST00000366923|EPRS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3441162109375	2	589.341726	1176.6689	0.88969	0.00052433	1.8917	0.0011148	2.7814	0.0016392	589.3427320349107	101.56	0.782	101.69	101.4	102.18	0.13541					29	18	2	0	0	0	0.85694	1	10682	10682		21.96	0.27414	1	107890	+		36673	19322	24324	24333	41718	41718					0.08763210939059718
MILQSRHVSPF	11	Unmodified	_MILQSRHVSPF_					0	0	0			REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.89990234375	3	438.904419	1313.69143	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.347	1	66.375	65.875	66.875	0.02858								0	0	0	0.56276	1	6276	6276		18.531	0.69791	1		+		36674	27574	24325	24334	41719	41719					0.04712810336673101
MILTVLALSA	10	Unmodified	_MILTVLALSA_					0	0	0			REV__nc|ENSG00000164300|Q86VE9-3|SERINC5	REV__nc|ENSG00000164300|Q86VE9-3|SERINC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3137817382812	2	516.312103	1030.60965	0.87601	0.00045229	2.4044	0.0012414	3.2804	0.0016937	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.85934	1	10624	10624		35.618	1.4457	1	67025000	+		36675	21062	24326	24335	41720	41720					0.09557314924882121
MIMNKGVFM	9	Unmodified	_MIMNKGVFM_					0	0	0		ENSG00000279000|ENST00000641238|OR10A6	ENSG00000279000|ENST00000641238|OR10A6	ENSG00000279000|ENST00000641238|OR10A6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.1630859375	2	535.763409	1069.51226	0.64784	0.00034709	-4.2414	-0.0022724	-3.5936	-0.0019253	536.2627567007006	79.704	0.39755	79.846	79.648	80.046	0.14118					27	17	2	0	0	0	0.20789	1	7596	7596		25.45	2.4077	1	49458			36676	9039	24327	24336	41721	41721					-0.019711135472789465
MIMNKGVFM	9	Unmodified	_MIMNKGVFM_					0	0	0		ENSG00000279000|ENST00000641238|OR10A6	ENSG00000279000|ENST00000641238|OR10A6	ENSG00000279000|ENST00000641238|OR10A6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	535.763409	1069.51226	0.94109	0.0005042	-4.9431	-0.0026483	-4.002	-0.0021441	535.7607149681816	79.956	0.50289	79.899	79.636	80.138	-0.056503	-0.013572	-0.0009144	NaN	25.45	33	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86895			36677	9039	24327	24336							-0.019711135472789465
MIMNKGVFM	9	Unmodified	_MIMNKGVFM_					0	0	0		ENSG00000279000|ENST00000641238|OR10A6	ENSG00000279000|ENST00000641238|OR10A6	ENSG00000279000|ENST00000641238|OR10A6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	535.763409	1069.51226	0.61835	0.00033129	-4.7133	-0.0025252	-4.095	-0.0021939	535.7608445028012	79.859	0.45651	79.913	79.638	80.094	0.053841	0.00015238	-0.00066814	NaN	25.45	30	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87550			36678	9039	24327	24336							-0.019711135472789465
MIMNKGVFM	9	Unmodified	_MIMNKGVFM_					0	0	0		ENSG00000279000|ENST00000641238|OR10A6	ENSG00000279000|ENST00000641238|OR10A6	ENSG00000279000|ENST00000641238|OR10A6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	535.763409	1069.51226	-0.0074681	-4.0011E-06	-3.6137	-0.0019361	-3.6212	-0.0019401	535.7612161739872	79.767	0.37671	79.898	79.678	80.055	0.13086	-0.015196	0.00051011	NaN	25.45	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71604			36679	9039	24327	24336							-0.019711135472789465
MIMNKGVFM	9	Unmodified	_MIMNKGVFM_					0	0	0		ENSG00000279000|ENST00000641238|OR10A6	ENSG00000279000|ENST00000641238|OR10A6	ENSG00000279000|ENST00000641238|OR10A6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	535.763409	1069.51226	-1.2109	-0.00064873	-2.8889	-0.0015478	-4.0997	-0.0021965	535.7619045400477	79.857	0.37402	79.956	79.725	80.099	0.098701	0.042622	0.0012868	NaN	25.45	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54362			36680	9039	24327	24336							-0.019711135472789465
MINALRVPL	9	Unmodified	_MINALRVPL_					0	0	0			REV__ENST00000508960.1_1_17:48172799-48174929:+|nuORF	REV__ENST00000508960.1_1_17:48172799-48174929:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8084106445312	2	513.810062	1025.60557	0.034734	1.7846E-05	-2.0578	-0.0010573	-2.0231	-0.0010395	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.7932	1	4563	4563		25.45	0	1	666950	+		36681	16091	24328	24337	41722	41722					0.09379270221825209
MINIILTGTG	10	Unmodified	_MINIILTGTG_					0	0	0			REV__nc|ENSG00000091129|Q92823-5|NRCAM	REV__nc|ENSG00000091129|Q92823-5|NRCAM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7933959960938	2	516.791535	1031.56852	0.70992	0.00036688	3.0022	0.0015515	3.7121	0.0019184	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.8608	1	8866	8866		34.173	0	1	842420	+		36682	29726	24329	24338	41723	41723					0.05399553885399655
MINLETFCDTS	11	Unmodified	_MINLETFCDTS_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	637.2744750976562	2	637.275589	1272.53662	-0.35273	-0.00022479	0.19399	0.00012362	-0.15875	-0.00010117	637.2757632523374	83.318	0.88019	83.749	83.414	84.294	0.43108					50	20	4	0	0	0	0.55601	1	9651	9651		47.96	1.5027	1	1275500	+		36683	23015	24330	24339	41724	41724					-0.08874226650709716
MIPHRPLLV	9	Unmodified	_MIPHRPLLV_					0	0	0		ENST00000409262.7_1_2:74332739-74332823:+|nuORF	ENST00000409262.7_1_2:74332739-74332823:+|nuORF	ENST00000409262.7_1_2:74332739-74332823:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.326904296875	2	538.325879	1074.63721	1.246	0.00067076	0.59429	0.00031992	1.8403	0.00099068	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.77546	1	11192	11192		31.955	1.4512	1	76567000			36684	11302	24331	24340	41725	41725					0.10287262975771228
MIQHVENLK	9	Unmodified	_MIQHVENLK_					0	0	0		ENSG00000118308|ENST00000556887|IRAG2;nc|ENSG00000118308|Q12912|IRAG2	ENSG00000118308|ENST00000556887|IRAG2	ENSG00000118308|ENST00000556887|IRAG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.2979125976562	2	556.300059	1110.58556	-0.90792	-0.00050507	-2.2195	-0.0012347	-3.1275	-0.0017398	556.2986094820882	75.928	0.56037	75.977	75.736	76.296	0.049194					26	15	2	0	0	0	0.58668	1	7326	7326		47.657	3.5405	1	142750			36685	3022	24332	24341	41726	41726					0.03469474491203073
MIQNAGAV	8	Unmodified	_MIQNAGAV_					0	0	0		ENSG00000163568|ENST00000368130|AIM2	ENSG00000163568|ENST00000368130|AIM2	ENSG00000163568|ENST00000368130|AIM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.2047119140625	2	402.207638	802.400723	-1.7943	-0.00072169	-3.0466	-0.0012254	-4.8409	-0.0019471	402.20636046917366	98.897	1.8674	99.119	98.298	100.17	0.22262					109	43	3	0	0	0	0.86791	1	10296	10296		28.254	1.4582	1	737490			36686	5828	24333	24342	41727	41727					-0.008380885885571843
MIQRLRAE	8	Unmodified	_MIQRLRAE_					0	0	0		ENSG00000185069|ENST00000332411|KRT76;CON__Q01546;ENSG00000170477|ENST00000551956|KRT4;CON__P19013;ENSG00000186442|ENST00000417996|KRT3;CON__P12035;CON__P07744;ENST00000547890.5_1_12:52910884-52911722:-|nuORF;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000170454|ENST00000252245|KRT75;CON__O95678;ENSG00000186081|ENST00000252242|KRT5;CON__P13647	ENSG00000185069|ENST00000332411|KRT76;CON__P07744;ENST00000547890.5_1_12:52910884-52911722:-|nuORF	ENSG00000185069|ENST00000332411|KRT76	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7700500488281	2	508.787118	1015.55968	-0.12423	-6.3205E-05	0.71753	0.00036507	0.59331	0.00030187	508.7872948114255	49.432	0.8577	49.892	49.38	50.237	0.45983					43	20	3	0	0	0	0.4196	1	4842	4842		73.975	0	1	550420		+	36687	600;590;577	24334	24343	41728	41728					0.052526250395885654
MIRDGIGGI	9	Unmodified	_MIRDGIGGI_					0	0	0		ENST00000490310.1_1_1:149903106-149903271:-|nuORF	ENST00000490310.1_1_1:149903106-149903271:-|nuORF	ENST00000490310.1_1_1:149903106-149903271:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2528076171875	2	466.25512	930.495686	-1.4677	-0.00068433	-1.5144	-0.00070609	-2.9821	-0.0013904	466.2543190866504	60.961	1.1333	60.992	59.95	61.083	0.0312					73	35	3	0	0	0	0.76255	1	5691	5691		35.618	0	1	265390			36688	12668	24335	24344	41729	41729					0.027658448826400672
MIRDGIGGI	9	Unmodified	_MIRDGIGGI_					0	0	0		ENST00000490310.1_1_1:149903106-149903271:-|nuORF	ENST00000490310.1_1_1:149903106-149903271:-|nuORF	ENST00000490310.1_1_1:149903106-149903271:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2540588378906	2	466.25512	930.495686	-1.0674	-0.00049767	-1.0623	-0.00049532	-2.1297	-0.00099299	466.25448738935614	62.753	1.2055	62.867	62.283	63.488	0.11388					96	59	2	0	0	0	0.7932	1	5487	5487		25.45	3.4903	1	146310			36689	12668	24335	24344	41730	41730					0.027658448826400672
MIRGNSGLKP	10	Unmodified	_MIRGNSGLKP_					0	0	0		ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF	ENSG00000009830|ENST00000261534|POMT2	ENSG00000009830|ENST00000261534|POMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.8009033203125	2	536.800226	1071.5859	-0.028403	-1.5247E-05	0.28121	0.00015095	0.25281	0.00013571	536.8001140939764	60.008	0.56015	60.102	59.879	60.439	0.094059					28	17	2	0	0	0	0.60985	1	5175	5175		49.536	1.8787	1	85326			36690	757	24336	24345	41731	41731					0.05296894211073777
MIRGNSGLKP	10	Unmodified	_MIRGNSGLKP_					0	0	0		ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF	ENSG00000009830|ENST00000261534|POMT2	ENSG00000009830|ENST00000261534|POMT2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	536.800226	1071.5859	-0.11466	-6.1549E-05	0.19215	0.00010315	0.077492	4.1598E-05	536.8002698321153	60.346	0.60742	60.332	60.001	60.608	-0.013729	0.11462	-8.9129E-05	NaN	49.536	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97908			36691	757	24336	24345							0.05296894211073777
MIRGNSGLKP	10	Unmodified	_MIRGNSGLKP_					0	0	0		ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF	ENSG00000009830|ENST00000261534|POMT2	ENSG00000009830|ENST00000261534|POMT2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	536.800226	1071.5859	0.92506	0.00049657	-1.3769	-0.00073911	-0.45182	-0.00024254	536.799448233871	60.213	0.48603	60.181	59.91	60.396	-0.031727	-0.03589	-0.0017736	NaN	49.536	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107760			36692	757	24336	24345							0.05296894211073777
MIRGNSGLKP	10	Unmodified	_MIRGNSGLKP_					0	0	0		ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF	ENSG00000009830|ENST00000261534|POMT2	ENSG00000009830|ENST00000261534|POMT2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	536.800226	1071.5859	-0.59478	-0.00031928	0.44984	0.00024147	-0.14495	-7.7807E-05	536.8002463987373	60.216	0.55929	60.248	59.951	60.51	0.032822	0.031013	0.00018752	NaN	49.536	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90033			36693	757	24336	24345							0.05296894211073777
MIRGNSGLKP	10	Unmodified	_MIRGNSGLKP_					0	0	0		ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF	ENSG00000009830|ENST00000261534|POMT2	ENSG00000009830|ENST00000261534|POMT2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	536.800226	1071.5859	0.47118	0.00025293	-0.050967	-2.7359E-05	0.42021	0.00022557	536.7998367926127	60.098	0.45064	60.214	59.906	60.356	0.11676	-0.0030732	-0.00035014	NaN	49.536	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	126400			36694	757	24336	24345							0.05296894211073777
MIRHRQRLLIW	11	Unmodified	_MIRHRQRLLIW_					0	0	0			REV__ENST00000548924.5_1_12:70901743-70904223:+|nuORF	REV__ENST00000548924.5_1_12:70901743-70904223:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.30413818359375	3	507.969757	1520.88744	-0.14975	-7.6069E-05	-0.40575	-0.00020611	-0.5555	-0.00028218	507.96960598258465	16.837	0.38681	16.758	16.595	16.982	-0.079054					26	13	3	0	0	0	0.8498	1	162	162		6.001	0.30226	1	67712	+		36695	28580	24337	24346	41732	41732					0.14783240301244405
MIRIIQLTL	9	Unmodified	_MIRIIQLTL_					0	0	0			REV__ENSG00000121879|ENST00000263967|PIK3CA	REV__ENSG00000121879|ENST00000263967|PIK3CA	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.8381958007812	2	550.846645	1099.67874	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.987	1	20.987	20.487	21.487	0								0	0	0	0.32159	1	538	538		23.042	0	1		+		36696	18468	24338	24347	41733	41733					0.1328839894445082
MIRKLRSAHLD	11	Unmodified	_MIRKLRSAHLD_					0	0	0		ENST00000420969.1_1_2:162357792-162360000:-|nuORF	ENST00000420969.1_1_2:162357792-162360000:-|nuORF	ENST00000420969.1_1_2:162357792-162360000:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.2729797363281	3	447.259084	1338.75542	2.7469	0.0012286	1.3034	0.00058295	4.0503	0.0018115	447.25997583303814	107.29	0.2789	107.26	107.14	107.42	-0.034134					9	6	2	0	0	0	0.17243	1	11878	11878		22.562	0	1	57714			36697	11457	24339	24348	41734	41734					0.09959590493622272
MIRTAIVK	8	Unmodified	_MIRTAIVK_					0	0	0			REV__ENSG00000124574|ENST00000372530|ABCC10	REV__ENSG00000124574|ENST00000372530|ABCC10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2908935546875	2	466.291505	930.568457	-0.42617	-0.00019872	-3.0928	-0.0014422	-3.519	-0.0016409	466.2898922448067	74.098	1.2536	74.054	73.807	75.061	-0.043877					90	43	4	0	0	0	0.89043	1	7310	7310		35.618	0.41757	1	967050	+		36698	18595	24340	24349	41735	41735					0.10039598676041805
MIRVPKGK	8	Unmodified	_MIRVPKGK_					0	0	0			REV__nc|ENSG00000070756|P11940-2|PABPC1	REV__nc|ENSG00000070756|P11940-2|PABPC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.790771484375	2	464.791672	927.568792	-0.072723	-3.3801E-05	-1.9734	-0.00091722	-2.0461	-0.00095102	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.86288	1	2142	2142		26.796	0.10319	1	297050	+		36699	16611	24341	24350	41736	41736					0.10211018395921201
MIRVPKGK	8	Unmodified	_MIRVPKGK_					0	0	0			REV__nc|ENSG00000070756|P11940-2|PABPC1	REV__nc|ENSG00000070756|P11940-2|PABPC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.79022216796875	2	464.791672	927.568792	-1.6424	-0.00076336	-0.52072	-0.00024202	-2.1631	-0.0010054	464.79130074195194	36.947	2.0594	36.958	35.753	37.812	0.011173					99	45	3	0	0	0	0.81548	1	2372	2372		20.482	5.8177	1	317960	+		36700	16611	24341	24350	41737	41737					0.10211018395921201
MISHPSGVIK	10	Unmodified	_MISHPSGVIK_					0	0	0		ENST00000478384.5_1_X:133905349-133906188:-|nuORF	ENST00000478384.5_1_X:133905349-133906188:-|nuORF	ENST00000478384.5_1_X:133905349-133906188:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.7955322265625	2	534.797152	1067.57975	0.13362	7.1457E-05	-3.0403	-0.001626	-2.9067	-0.0015545	534.7954915145849	55.924	0.60534	56.325	55.991	56.596	0.40102					30	16	2	0	0	0	0.47091	1	5755	5755		58.23	10.314	1	920280			36701	12387	24342	24351	41738	41738					0.048663759795317674
MISHPSGVIK	10	Unmodified	_MISHPSGVIK_					0	0	0		ENST00000478384.5_1_X:133905349-133906188:-|nuORF	ENST00000478384.5_1_X:133905349-133906188:-|nuORF	ENST00000478384.5_1_X:133905349-133906188:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.7940063476562	2	534.797152	1067.57975	0.12819	6.8555E-05	-3.1229	-0.0016701	-2.9947	-0.0016015	534.7953883717148	55.76	0.7196	56.319	55.983	56.703	0.55954					33	18	3	0	0	0	0.46422	1	5751	5751		58.782	7.4465	1	923750			36702	12387	24342	24351	41739	41739					0.048663759795317674
MISKLCMCI	9	Oxidation (M)	_M(Oxidation (M))ISKLCMCI_		M(1)ISKLCMCI		M(46)ISKLCM(-46)CI	0	0	1			REV__nc|ENSG00000185261|Q8IV33|KIAA0825	REV__nc|ENSG00000185261|Q8IV33|KIAA0825	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.6790161132812	2	529.249277	1056.484	0.85057	0.00045017	-3.5211	-0.0018635	-2.6705	-0.0014134	529.2484988016431	68.936	0.41812	69.32	69.06	69.479	0.38416					13	9	2	0	0	0	0.48102	1	7587	7587		52.937	6.9645	2	199270	+		36703	22753	24343	24352	41740	41740		346			-0.04198179518880352
MISSQVLQIPV	11	Unmodified	_MISSQVLQIPV_					0	0	0		nc|ENSG00000221887|P0C7T4|HMSD	nc|ENSG00000221887|P0C7T4|HMSD	nc|ENSG00000221887|P0C7T4|HMSD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.564697265625	3	405.565291	1213.67404	-1.8662	-0.00075687	0.4932	0.00020003	-1.373	-0.00055685	405.5653987385133	59.885	1.7634	59.979	59.006	60.769	0.094059					140	62	3	0	0	0	0.71803	1	5167	5167		28.577	0.93281	1	349460			36704	15259	24344	24353	41741	41741					0.0757547001101102
MITVKCNDE	9	Unmodified	_MITVKCNDE_					0	0	0			REV__ENSG00000144395|ENST00000389175|CCDC150;REV__nc|ENSG00000144395|Q8NCX0-2|CCDC150	REV__ENSG00000144395|ENST00000389175|CCDC150	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.7424926757812	2	526.741185	1051.46782	0.41852	0.00022045	2.369	0.0012479	2.7875	0.0014683	526.7422541331694	75.209	1.0379	75.604	75.158	76.196	0.39507					57	24	3	0	0	0	0.55097	1	8549	8549		49.442	1.7842	1	1206900	+		36705	19886;29906	24345	24354	41742	41742					-0.05585846159783614
MIVADGPVR	9	Unmodified	_MIVADGPVR_					0	0	0			REV__ENSG00000115183|ENST00000263635|TANC1	REV__ENSG00000115183|ENST00000263635|TANC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27740478515625	2	479.262945	956.511337	-0.09849	-4.7203E-05	0.39174	0.00018775	0.29325	0.00014055	479.26280396295317	84.591	0.52345	84.658	84.549	85.073	0.067169					18	11	2	0	0	0	0.20789	1	8499	8499		27.882	7.4004	1	50040	+		36706	18091	24346	24355	41743	41743					0.03134131399679063
MIVFLVFKH	9	Unmodified	_MIVFLVFKH_					0	0	0		nc|ENSG00000133105|Q8WXD0-2|RXFP2;chr13:31781742-31786383|21|55.9|0.04|10.53|+|ENST00000380314|RXFP2,RXFP2;ENSG00000133105|ENST00000298386|RXFP2	nc|ENSG00000133105|Q8WXD0-2|RXFP2	nc|ENSG00000133105|Q8WXD0-2|RXFP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3300170898438	2	567.33063	1132.64671	-1.3958	-0.00079187	0.29426	0.00016694	-1.1015	-0.00062493	567.3306768153905	113.32	5.91	113.27	113.24	119.15	-0.044777					245	138	3	0	0	0	0.7932	1	12634	12634		26.796	6.3143	1	1691900			36707	151	24347	24356	41744	41744					0.08569031261299642
MIVRLPQPR	9	Unmodified	_MIVRLPQPR_					0	0	0		chr15:35220582-35328840|39|39.59|0.0|21.92|-|0|TE_info:THE1A,THE1A_dup3684,ERVL-MaLR,LTR,donor,-,35328840,35329126|DPH6,None|4	chr15:35220582-35328840|39|39.59|0.0|21.92|-|0|TE_info:THE1A,THE1A_dup3684,ERVL-MaLR,LTR,donor,-,35328840,35329126|DPH6,None|4	chr15:35220582-35328840|39|39.59|0.0|21.92|-|0|TE_info:THE1A,THE1A_dup3684,ERVL-MaLR,LTR,donor,-,35328840,35329126|DPH6,None|4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.3073120117188	2	555.334236	1108.65392	-0.85279	-0.00047358	1.0961	0.00060872	0.24333	0.00013513	555.3349208713906	90.623	2.1337	90.692	89.257	91.391	0.069328					70	50	2	0	0	0	0.20789	1	9277	9277		29.15	19.444	1	204130			36708	183	24348	24357	41745	41745					0.1039376386170261
MIVTWPLGG	9	Oxidation (M)	_M(Oxidation (M))IVTWPLGG_		M(1)IVTWPLGG		M(48)IVTWPLGG	0	0	1			REV__ENST00000359541.6_1_2:27549424-27549496:-|nuORF	REV__ENST00000359541.6_1_2:27549424-27549496:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2582702636719	2	495.259871	988.505189	-2.6631	-0.0013189	1.1215	0.00055543	-1.5416	-0.0007635	495.26028573461133	40.858	1.9733	41.25	40.867	42.841	0.39209					105	53	3	0	0	0	0.58151	1	3555	3555		47.916	10.756	1	8396000	+		36709	25461	24349	24358	41746	41746		393			0.01047613168168482
MIVYWSQPK	9	Unmodified	_MIVYWSQPK_					0	0	0		L1PA5_dup10786|chr19:22675332-22678335:+|1.1708874818612802|0.0391258163957598|4.9|62.0|7|1|sense	L1PA5_dup10786|chr19:22675332-22678335:+|1.1708874818612802|0.0391258163957598|4.9|62.0|7|1|sense	L1PA5_dup10786|chr19:22675332-22678335:+|1.1708874818612802|0.0391258163957598|4.9|62.0|7|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.7982788085938	2	576.299527	1150.5845	-0.51371	-0.00029605	1.1219	0.00064656	0.6082	0.00035051	576.801808858661	77.413	0.98939	77.818	77.274	78.263	0.40531					69	24	4	0	0	0	0.28163	1	8753	8753		66.429	0.6261	1	695960			36710	14636	24350	24359	41747	41747					0.01523260122303327
MIVYWSQPK	9	Unmodified	_MIVYWSQPK_					0	0	0		L1PA5_dup10786|chr19:22675332-22678335:+|1.1708874818612802|0.0391258163957598|4.9|62.0|7|1|sense	L1PA5_dup10786|chr19:22675332-22678335:+|1.1708874818612802|0.0391258163957598|4.9|62.0|7|1|sense	L1PA5_dup10786|chr19:22675332-22678335:+|1.1708874818612802|0.0391258163957598|4.9|62.0|7|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.80126953125	2	576.299527	1150.5845	-0.58544	-0.00033739	1.3491	0.0007775	0.76369	0.00044011	576.8016818558231	77.182	1.0318	77.751	77.308	78.34	0.56836					72	25	4	0	0	0	0.12652	1	8785	8785		87.754	26.782	1	705710			36711	14636	24350	24359	41748	41748					0.01523260122303327
MIYPMTVLK	9	Oxidation (M)	_MIYPM(Oxidation (M))TVLK_		M(0.098)IYPM(0.902)TVLK		M(-9.6)IYPM(9.6)TVLK	0	0	1			REV__ENST00000427814.5_1_7:27871882-27872035:-|nuORF	REV__ENST00000427814.5_1_7:27871882-27872035:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	556.30078125	2	556.298139	1110.58172	0.24575	0.00013671	-0.29195	-0.00016241	-0.046202	-2.5702E-05	556.2977452704006	75.861	0.66244	75.815	75.554	76.217	-0.045982					33	16	3	0	0	0	0.35373	1	7494	7494		60.972	8.0352	2	159240	+		36712	26572	24351	24360	41749	41749		407			0.03085668673111286
MKAICEGSYF	10	Unmodified	_MKAICEGSYF_					0	0	0			REV__nc|ENSG00000075702|O43379|WDR62	REV__nc|ENSG00000075702|O43379|WDR62	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.7565307617188	2	574.759378	1147.5042	-0.71952	-0.00041355	-3.9114	-0.0022481	-4.6309	-0.0026616	574.7570581194025	32.184	0.64754	32.31	32.03	32.677	0.12643					32	14	3	0	0	0	0.30722	3	2224	2224;2249;2261		71.877	13.096	1	792090	+		36713	16717	24352	24361	41750;41751;41752	41750					-0.06364969263063358
MKALPIRTP	9	Unmodified	_MKALPIRTP_					0	0	0			REV__ENST00000355072.9_1_4:3244305-3244500:+|nuORF	REV__ENST00000355072.9_1_4:3244305-3244500:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.81103515625	2	513.810062	1025.60557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.964	1	56.935	56.435	57.435	-0.02866								0	0	0	0.29273	1	5234	5234		40.778	5.1599	1		+		36714	25369	24353	24362	41753	41753					0.09379270221825209
MKALPIRTP	9	Unmodified	_MKALPIRTP_					0	0	0			REV__ENST00000355072.9_1_4:3244305-3244500:+|nuORF	REV__ENST00000355072.9_1_4:3244305-3244500:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8085327148438	2	513.810062	1025.60557	-0.48873	-0.00025111	-1.1597	-0.00059588	-1.6484	-0.00084699	513.8093707481859	57.657	1.7065	57.641	56.536	58.243	-0.01643					115	82	2	0	0	0	0.7932	1	4933	4933		26.693	1.2427	1	113540	+		36715	25369	24353	24362	41754	41754					0.09379270221825209
MKALPIRTP	9	Unmodified	_MKALPIRTP_					0	0	0			REV__ENST00000355072.9_1_4:3244305-3244500:+|nuORF	REV__ENST00000355072.9_1_4:3244305-3244500:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	513.810062	1025.60557	-0.48873	-0.00025111	-1.1597	-0.00059588	-1.6484	-0.00084699	513.8093707481859	57.657	1.7065	57.641	56.536	58.243	-0.01643	-0.064424	-0.00034358	NaN	26.693	115	82	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113540	+		36716	25369	24353	24362							0.09379270221825209
MKDSCITVM	9	2 Oxidation (M)	_M(Oxidation (M))KDSCITVM(Oxidation (M))_		M(1)KDSCITVM(1)		M(61)KDSCITVM(61)	0	0	2		ENST00000565348.5_1_16:30484158-30495228:+|nuORF;nc|ENSG00000005844|P20701-3|ITGAL;ENSG00000005844|ENST00000356798|ITGAL;nc|ENSG00000005844|P20701-2|ITGAL	ENST00000565348.5_1_16:30484158-30495228:+|nuORF	ENST00000565348.5_1_16:30484158-30495228:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2276000976562	2	530.229596	1058.44464	0.27818	0.0001475	-2.7458	-0.0014559	-2.4676	-0.0013084	530.2281028649721	29.608	1.0487	29.565	29.054	30.103	-0.043095					65	31	3	0	0	0	0.35373	1	1552	1552		60.972	7.6205	1	312550			36717	13910	24354	24363	41755	41755		203;204			-0.08224608268733391
MKEEIEVDP	9	Unmodified	_MKEEIEVDP_					0	0	0		nc|ENSG00000122870|Q9H694-2|BICC1;ENSG00000122870|ENST00000373886|BICC1	nc|ENSG00000122870|Q9H694-2|BICC1	nc|ENSG00000122870|Q9H694-2|BICC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.1622924804688	2	545.260265	1088.50598	-1.6315	-0.00088959	3.066	0.0016718	1.4345	0.00078219	545.2621077705442	48.179	0.20206	48.648	48.466	48.668	0.46941					5	4	2	0	0	0	0.20789	1	4610	4610		20.947	0	1	104590			36718	3251	24355	24364	41756	41756					-0.03473636973444627
MKEVGSHFDD	10	Unmodified	_MKEVGSHFDD_					0	0	0		nc|ENSG00000057252|P35610-3|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;ENSG00000057252|ENST00000367619|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.7525634765625	2	582.753138	1163.49172	-0.47354	-0.00027596	3.4124	0.0019886	2.9389	0.0017126	582.75508931446	58.628	0.6612	59.181	58.837	59.498	0.55323					33	15	3	0	0	0	0.8545	1	6167	6167		36.447	0.82846	1	514330			36719	1036	24356	24365	41757	41757					-0.08348289401715192
MKFILWRRFRW	11	Unmodified	_MKFILWRRFRW_					0	0	0		nc|ENSG00000135636|O75923-3|DYSF;nc|ENSG00000135636|O75923-9|DYSF;nc|ENSG00000135636|O75923|DYSF;nc|ENSG00000135636|O75923-14|DYSF;nc|ENSG00000135636|O75923-6|DYSF;nc|ENSG00000135636|O75923-12|DYSF;nc|ENSG00000135636|O75923-5|DYSF;nc|ENSG00000135636|O75923-11|DYSF;nc|ENSG00000135636|O75923-4|DYSF;nc|ENSG00000135636|O75923-10|DYSF;nc|ENSG00000135636|O75923-2|DYSF;nc|ENSG00000135636|O75923-8|DYSF;nc|ENSG00000135636|O75923-7|DYSF;ENSG00000135636|ENST00000410020|DYSF	nc|ENSG00000135636|O75923-3|DYSF	nc|ENSG00000135636|O75923-3|DYSF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2630615234375	3	546.978252	1637.91293	-0.074078	-4.0519E-05	-3.5716	-0.0019536	-3.6457	-0.0019941	547.3100271204618	62.746	0.21599	63.3	63.123	63.339	0.55449					6	4	2	0	0	0	0.1842	1	6724	6724		1.523	1.523	1	64811			36720	4041	24357	24366	41758	41758					0.11948714823643058
MKGQFAEH	8	Unmodified	_MKGQFAEH_					0	0	0		nc|ENSG00000174953|Q9H2U1-3|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;ENSG00000174953|ENST00000496811|DHX36;ENST00000460695.1_1_3:153998366-154000997:-|nuORF	nc|ENSG00000174953|Q9H2U1-3|DHX36	nc|ENSG00000174953|Q9H2U1-3|DHX36	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.22515869140625	2	474.22382	946.433086	0.65646	0.00031131	-2.0713	-0.00098227	-1.4149	-0.00067097	474.2226664298733	66.642	1.4894	67.027	66.622	68.112	0.38541					75	41	3	0	0	0	0.85277	1	7258	7258		25.45	4.9683	1	883560			36721	6978	24358	24367	41759	41759					-0.042273011855627374
MKHGTREIIRL	11	Unmodified	_MKHGTREIIRL_					0	0	0			REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.9330749511719	3	451.930968	1352.77107	0.82689	0.0003737	2.9583	0.0013369	3.7852	0.0017106	451.9322387117762	100.27	1.763	100.6	99.729	101.49	0.33295					121	44	4	0	0	0	0.74002	1	12181	12181		24.276	2.5902	1	816050	+		36722	20516	24359	24368	41760	41760					0.10879877010688688
MKILTNCQP	9	Unmodified	_MKILTNCQP_					0	0	0		nc|ENSG00000169994|Q6PIF6-2|MYO7B;nc|ENSG00000169994|Q6PIF6|MYO7B;ENSG00000169994|ENST00000409816|MYO7B	nc|ENSG00000169994|Q6PIF6-2|MYO7B	nc|ENSG00000169994|Q6PIF6-2|MYO7B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2708129882812	2	524.269912	1046.52527	0.71347	0.00037405	1.4509	0.00076067	2.1644	0.0011347	524.2705766270246	76.14	0.90393	76.538	76.199	77.103	0.39823					51	22	3	0	0	0	0.07589	1	8648	8648		98.629	10.875	1	1523700			36723	15086	24360	24369	41761	41761					0.0038704083644915954
MKIPTYKF	8	Unmodified	_MKIPTYKF_					0	0	0		ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF	ENSG00000149311|ENST00000675843|ATM	ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.2869262695312	2	514.285889	1026.55722	0.65671	0.00033774	1.6512	0.0008492	2.3079	0.0011869	514.2865472564384	81.168	0.93392	81.108	80.71	81.644	-0.059692					46	21	3	0	0	0	0.90837	1	8191	8191		56.721	5.3856	1	381200			36724	5019	24361	24370	41762	41762					0.04500776581926402
MKKGKLQDVLN	11	Unmodified	_MKKGKLQDVLN_					0	0	0			REV__ENST00000569236.5_1_16:27236480-27252833:-|nuORF	REV__ENST00000569236.5_1_16:27236480-27252833:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	637.3679809570312	2	637.368472	1272.72239	0.93683	0.0005971	2.1969	0.0014002	3.1337	0.0019973	637.3697894840569	105.65	2.5352	105.76	104.94	107.48	0.10766					185	62	4	0	0	0	0.7434	1	11306	11306		23.523	0.94304	1	2641200	+		36725	28910	24362	24371	41763	41763					0.09693963650920523
MKKHNKRVPA	10	Unmodified	_MKKHNKRVPA_					0	0	0			REV__nc|ENSG00000286102|A0A494C0Y3|FAM246A	REV__nc|ENSG00000286102|A0A494C0Y3|FAM246A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.858642578125	2	604.855867	1207.69718	0.012057	7.2928E-06	4.4158	0.0026709	4.4278	0.0026782	604.8584425211963	80.105	0.71658	80.632	80.233	80.949	0.52676					43	16	3	0	0	0	0.86106	1	9234	9234		15.642	0	1	1113700	+		36726	30285	24363	24372	41764	41764					0.10163953639016654
MKKKKKKKKTR	11	Unmodified	_MKKKKKKKKTR_					0	0	0			REV__ENST00000367558.5_1_1:182569199-182569457:-|nuORF	REV__ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.9921875	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.025	1	72.411	71.911	72.911	0.38581								0	0	0	0.56276	1	8034	8034		1.2319	0.083693	1		+		36727	25570	24364	24373	41765	41765					0.2613015465492481
MKKKYKKR	8	Unmodified	_MKKKYKKR_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.3539428710938	2	555.352428	1108.6903	-0.45069	-0.00025029	2.1697	0.0012049	1.719	0.00095465	555.3535032243398	101.3	2.2254	101.3	100.77	103	0					164	54	4	0	0	0	0.85277	1	10348	10348		25.45	2.4077	1	2945100	+		36728	20414	24365	24374	41766	41766					0.14030640758414847
MKKKYKKR	8	Unmodified	_MKKKYKKR_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3532104492188	2	555.352428	1108.6903	0.32258	0.00017915	1.0861	0.0006032	1.4087	0.00078234	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.79929	1	10604	10604		18.324	0	1	7708500	+		36729	20414	24365	24374	41767	41767					0.14030640758414847
MKKKYKKR	8	Unmodified	_MKKKYKKR_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.3530883789062	2	555.352428	1108.6903	-1.4347	-0.00079677	2.8883	0.001604	1.4536	0.00080727	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.84341	1	10490	10490		24.203	0.68005	1	5963400	+		36730	20414	24365	24374	41768	41768					0.14030640758414847
MKKKYKKR	8	Unmodified	_MKKKYKKR_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.3544921875	2	555.352428	1108.6903	1.5834	0.00087937	0.34035	0.00018901	1.9238	0.0010684	555.3524993853406	100.59	1.0891	100.89	100.45	101.54	0.2999					67	28	3	0	0	0	0.84341	1	12152	12152		24.203	1.1603	1	1093500	+		36731	20414	24365	24374	41769	41769					0.14030640758414847
MKKPNSLL	8	Unmodified	_MKKPNSLL_					0	0	0		ENST00000373840.8_1_9:123943837-123945630:-|nuORF	ENST00000373840.8_1_9:123943837-123945630:-|nuORF	ENST00000373840.8_1_9:123943837-123945630:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7776184082031	2	465.775688	929.536823	-0.25577	-0.00011913	4.2902	0.0019982	4.0344	0.0018791	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.88601	1	7943	7943		34.173	0.65696	1	451640			36732	10759	24366	24375	41770	41770					0.06923605922111165
MKKRRRTMA	9	Unmodified	_MKKRRRTMA_					0	0	0			REV__ENST00000217315.9_1_20:30729570-30730884:+|nuORF	REV__ENST00000217315.9_1_20:30729570-30730884:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3432006835938	2	589.342069	1176.66959	0.83312	0.00049099	0.56133	0.00033082	1.3945	0.00082181	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.72402	1	9910	9910		38.806	3.1879	1	20363000	+		36733	24139	24367	24376	41771	41771					0.08831727107121878
MKLELGLH	8	Unmodified	_MKLELGLH_					0	0	0		ENSG00000182923|ENST00000675561|CEP63;nc|ENSG00000182923|Q96MT8-4|CEP63;nc|ENSG00000182923|Q96MT8-3|CEP63;nc|ENSG00000182923|Q96MT8-2|CEP63	ENSG00000182923|ENST00000675561|CEP63	ENSG00000182923|ENST00000675561|CEP63	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7690124511719	2	470.767863	939.521173	-1.0178	-0.00047915	3.0761	0.0014481	2.0583	0.00096897	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.83466	1	4378	4378		23.037	1.0768	1	1648400			36734	7483	24368	24377	41772	41772					0.04899319405069491
MKLFPKGT	8	Unmodified	_MKLFPKGT_					0	0	0		ENSG00000169679|ENST00000302759|BUB1;nc|ENSG00000169679|O43683-3|BUB1;nc|ENSG00000169679|O43683-2|BUB1	ENSG00000169679|ENST00000302759|BUB1	ENSG00000169679|ENST00000302759|BUB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	461.26531982421875	2	461.264956	920.515359	0.65042	0.00030002	-0.42465	-0.00019588	0.22577	0.00010414	461.2645901499701	92.955	1.6766	93.001	92.496	94.172	0.045448					111	39	4	0	0	0	0.8347	1	9729	9729		23.042	2.0956	1	1185800			36735	6515	24369	24378	41773	41773					0.0519222089340019
MKLSATVIF	9	Unmodified	_MKLSATVIF_					0	0	0		nc|ENSG00000159733|Q9HCC9-5|ZFYVE28;nc|ENSG00000159733|Q9HCC9-4|ZFYVE28;nc|ENSG00000159733|Q9HCC9-3|ZFYVE28;nc|ENSG00000159733|Q9HCC9-2|ZFYVE28;ENSG00000159733|ENST00000290974|ZFYVE28	nc|ENSG00000159733|Q9HCC9-5|ZFYVE28	nc|ENSG00000159733|Q9HCC9-5|ZFYVE28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.29193115234375	2	505.291171	1008.56779	-1.5977	-0.00080733	2.1843	0.0011037	0.58659	0.0002964	505.2922038023598	97.2	2.3775	97.402	96.877	99.255	0.20206					132	54	3	0	0	0	0.78058	1	9970	9970		30.504	3.7075	1	991360			36736	5545	24370	24379	41774	41774					0.06384759236345872
MKLTLKLSA	9	Unmodified	_MKLTLKLSA_					0	0	0			REV__ENST00000397195.9_1_17:2588550-2588628:+|nuORF	REV__ENST00000397195.9_1_17:2588550-2588628:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.81402587890625	2	502.81227	1003.60999	-0.061598	-3.0972E-05	2.8239	0.0014199	2.7623	0.0013889	502.81375645147	97.475	3.9537	97.532	96.775	100.73	0.056839					266	91	5	0	0	0	0.7932	1	10335	10335		21.96	0.25755	1	22149000	+		36737	26160	24371	24380	41775	41775					0.10832734644714037
MKLTLKLSA	9	Unmodified	_MKLTLKLSA_					0	0	0			REV__ENST00000397195.9_1_17:2588550-2588628:+|nuORF	REV__ENST00000397195.9_1_17:2588550-2588628:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.81396484375	2	502.81227	1003.60999	1.0921	0.0005491	2.2637	0.0011382	3.3557	0.0016873	502.8134123573575	96.951	3.6734	97.356	96.802	100.47	0.40498					209	90	5	0	0	0	0.77244	1	11614	11614		32.812	0.85756	1	10379000	+		36738	26160	24371	24380	41776	41776					0.10832734644714037
MKMTILPKVIH	11	Unmodified	_MKMTILPKVIH_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.92822265625	3	437.594416	1309.76142	-1.625	-0.00071111	0.050976	2.2307E-05	-1.5741	-0.0006888	437.5943775926199	17.133	0.5139	17.178	16.97	17.484	0.0457					57	22	4	0	0	0	0.74771	1	240	240		22.562	0.78116	1	252600			36739	14696	24372	24381	41777	41777					0.11892972680948333
MKNIIAPN	8	Unmodified	_MKNIIAPN_					0	0	0			REV__ENSG00000136813|ENST00000684092|ECPAS	REV__ENSG00000136813|ENST00000684092|ECPAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7545166015625	2	450.752213	899.489873	0.78549	0.00035406	3.5542	0.0016021	4.3397	0.0019561	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.90465	2	8111	8111;8193		42.474	8.3019	1	420760	+		36740	19335	24373	24382	41778;41779	41778					0.0361074637096408
MKNVMDSSNGL	11	Oxidation (M)	_MKNVM(Oxidation (M))DSSNGL_		M(0.063)KNVM(0.937)DSSNGL		M(-12)KNVM(12)DSSNGL	0	0	1		nc|ENSG00000156535|Q6YHK3-2|CD109;nc|ENSG00000156535|Q6YHK3-4|CD109;ENSG00000156535|ENST00000287097|CD109;nc|ENSG00000156535|Q6YHK3-3|CD109	nc|ENSG00000156535|Q6YHK3-2|CD109	nc|ENSG00000156535|Q6YHK3-2|CD109	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.51824951171875	3	404.518012	1210.53221	1.889	0.00076412	-1.3725	-0.0005552	0.51647	0.00020892	404.51739819622696	24.757	0.93367	24.244	23.79	24.724	-0.51365					46	20	3	0	0	0	0.50248	1	1220	1220		51.727	12.973	2	958250			36741	5381	24374	24383	41780	41780		94			-0.06463691073599875
MKQALLPIQLP	11	Unmodified	_MKQALLPIQLP_					0	0	0			REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.9225769042969	3	417.921298	1250.74206	-0.18602	-7.7743E-05	2.6603	0.0011118	2.4743	0.0010341	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.75921	1	11561	11561		17.833	1.3033	1	19495000	+		36742	25968	24375	24384	41781	41781					0.12672339661685328
MKQALLPIQLP	11	Unmodified	_MKQALLPIQLP_					0	0	0			REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3795166015625	2	626.378309	1250.74206	1.374	0.00086065	-0.26629	-0.0001668	1.1077	0.00069385	626.3778876948486	107.84	0.75342	107.98	107.32	108.07	0.13867					64	18	4	0	0	0	0.73893	1	11596	11596		24.519	4.5224	1	27248000	+		36743	25968	24375	24384	41782	41782					0.12672339661685328
MKQALLPIQLP	11	Unmodified	_MKQALLPIQLP_					0	0	0			REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.380126953125	2	626.378309	1250.74206	2.0982	0.0013142	0.06146	3.8497E-05	2.1596	0.0013527	626.3782628803294	105.51	2.7267	105.67	104.93	107.65	0.15583					187	94	2	0	0	0	0.6921	1	12785	12785		32.812	0	1	2939000	+		36744	25968	24375	24384	41783	41783					0.12672339661685328
MKQALLPIQLP	11	Unmodified	_MKQALLPIQLP_					0	0	0			REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.92218017578125	3	417.921298	1250.74206	4.0685	0.0017003	-1.7997	-0.00075212	2.2688	0.00094818	417.9204504044182	105.51	2.6111	105.69	104.89	107.5	0.18647					199	86	4	0	0	0	0.7342	1	12855	12855		17.167	0	1	601650	+		36745	25968	24375	24384	41784	41784					0.12672339661685328
MKRAAALH	8	Unmodified	_MKRAAALH_					0	0	0		nc|ENSG00000103194|Q14694-2|USP10	nc|ENSG00000103194|Q14694-2|USP10	nc|ENSG00000103194|Q14694-2|USP10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2608642578125	2	449.257997	896.501441	2.2924	0.0010299	2.758	0.0012391	5.0505	0.002269	449.2585996491544	100.52	1.0502	100.86	100.41	101.46	0.3459					58	25	3	0	0	0	0.92176	1	12220	12220		46.766	0	1	361540			36746	14825	24376	24385	41785	41785					0.04904988184944159
MKREVWLIP	9	Unmodified	_MKREVWLIP_					0	0	0			REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1	REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.237548828125	2	586.336444	1170.65834	-1.0295	-0.00060365	2.1183	0.001242	1.0888	0.00063838	586.3375240850291	44.895	0.57603	45.739	45.419	45.995	0.84438					31	13	3	0	0	0	0.20789	1	4161	4161		69.628	2.6657	1	738300	+		36747	17646	24377	24386	41786	41786					0.07983228284638244
MKRLRVPPL	9	Unmodified	_MKRLRVPPL_					0	0	0		nc|ENSG00000143324|Q9UBH6-2|XPR1;ENSG00000143324|ENST00000367590|XPR1	nc|ENSG00000143324|Q9UBH6-2|XPR1	nc|ENSG00000143324|Q9UBH6-2|XPR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3536376953125	2	555.352428	1108.6903	0.85674	0.00047579	0.63766	0.00035412	1.4944	0.00082991	555.3526695275054	100.86	2.5278	101	100.46	102.99	0.14352					194	61	5	0	0	0	0.7932	1	10632	10632		24.203	0	1	5097700			36748	4619	24378	24387	41787	41787					0.14030640758437585
MKRQRQRRRRR	11	Unmodified	_MKRQRQRRRRR_					0	0	0			REV__ENST00000560608.5_1_15:58971480-59041769:-|nuORF	REV__ENST00000560608.5_1_15:58971480-59041769:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.582763671875	4	407.500013	1625.97094	0.16622	6.7734E-05	-1.0698	-0.00043594	-0.90358	-0.00036821	407.49954882719294	17.477	0.34412	16.867	16.659	17.003	-0.6107					15	7	3	0	0	0	0.1838	1	257	257		3.2113	0.18535	1	69778	+		36749	28735	24379	24388	41788	41788					0.1829978952162037
MKRVVRFAPG	10	Unmodified	_MKRVVRFAPG_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.8402709960938	2	580.839685	1159.66482	0.64192	0.00037286	0.86218	0.00050079	1.5041	0.00087365	580.8399997377094	69.658	0.88029	69.793	69.47	70.351	0.13506					122	43	4	0	0	0	0.86763	1	6321	6321		26.693	2.4902	1	14396000	+		36750	22712	24380	24389	41789	41789					0.09137166235996119
MKRYLWERYRE	11	Unmodified	_MKRYLWERYRE_					0	0	0		ENSG00000111696|ENST00000392876|NT5DC3	ENSG00000111696|ENST00000392876|NT5DC3	ENSG00000111696|ENST00000392876|NT5DC3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	543.9495239257812	3	543.948798	1628.82457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.174	1	47.086	46.586	47.586	-0.087646								0	0	0	0.56276	1	3510	3510		5.4129	1.7939	1				36751	2604	24381	24390	41790	41790					0.03530629722536105
MKSISLHKKN	10	Unmodified	_MKSISLHKKN_					0	0	0		ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	593.8461303710938	2	593.342258	1184.66996	3.3538	0.0019899	0.12829	7.6121E-05	3.4821	0.0020661	593.3422294286001	103.53	2.4934	103.48	103.12	105.61	-0.043755					162	59	4	0	0	0	0.85834	1	11453	11453		22.58	0.61977	1	2080000			36752	9022	24382	24391	41791	41791					0.0850142530798621
MKSKLPASEP	10	Unmodified	_MKSKLPASEP_					0	0	0			REV__ENST00000530945.1_1_11:65623104-65623215:-|nuORF	REV__ENST00000530945.1_1_11:65623104-65623215:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.3327026367188	2	544.294442	1086.57433	1.1215	0.00061043	-0.34336	-0.00018689	0.77815	0.00042354	544.2941380498777	98.12	0.66025	98.496	98.246	98.907	0.37678					34	15	3	0	0	0	0.37624	1	11824	11824		63.534	43.537	1	269540	+		36753	21182	24383	24392	41792	41792					0.03450652397077647
MKSLPPPN	8	Unmodified	_MKSLPPPN_					0	0	0			REV__ENSG00000140396|ENST00000452400|NCOA2	REV__ENSG00000140396|ENST00000452400|NCOA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.24066162109375	2	442.238938	882.463324	1.3093	0.00057901	3.1237	0.0013814	4.433	0.0019604	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.88601	1	8269	8269		34.173	0.65696	1	1244000	+		36754	19612	24384	24393	41793	41793					0.01739057479630901
MKTLRKLCSK	10	Unmodified	_MKTLRKLCSK_					0	0	0		ENST00000506600.1_2_5:10264891-10264939:+|nuORF	ENST00000506600.1_2_5:10264891-10264939:+|nuORF	ENST00000506600.1_2_5:10264891-10264939:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3516845703125	2	604.354311	1206.69407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.284	1	82.439	81.939	82.939	0.15474								0	0	0	0.45132	1	7912	7912		27.047	2.5281	1				36755	12940	24385	24394	41794	41794					0.09898942469953909
MKTRKILTQKP	11	Unmodified	_MKTRKILTQKP_					0	0	0			REV__chr17:47658660-47668186|13|17.31|0.08|7.77|+|1|KPNB1,KPNB1|1	REV__chr17:47658660-47668186|13|17.31|0.08|7.77|+|1|KPNB1,KPNB1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.60980224609375	3	448.611235	1342.81188	-0.14494	-6.5021E-05	-4.2626	-0.0019122	-4.4075	-0.0019773	448.9437169224278	77.071	0.84238	77.124	76.655	77.498	0.052704					75	41	2	0	0	0	0.73277	1	7478	7478		25.892	6.629	1	780830	+		36756	15656	24386	24395	41795	41795					0.15418218330273703
MKTVVLDLL	9	Unmodified	_MKTVVLDLL_					0	0	0		nc|ENSG00000076555|O00763-3|ACACB;ENSG00000076555|ENST00000338432|ACACB	nc|ENSG00000076555|O00763-3|ACACB	nc|ENSG00000076555|O00763-3|ACACB	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.31396484375	2	516.312103	1030.60965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.89	1	114.95	114.45	115.45	0.061073								0	0	0	0.29475	1	12271	12271		32.812	3.6629	1				36757	1360	24387	24396	41796	41796					0.09557314924882121
MKVKPTKA	8	Unmodified	_MKVKPTKA_					0	0	0		ENST00000343470.8_2_4:4281460-4283574:-|nuORF	ENST00000343470.8_2_4:4281460-4283574:-|nuORF	ENST00000343470.8_2_4:4281460-4283574:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.7799072265625	2	451.778231	901.541908	0.62854	0.00028396	3.8881	0.0017566	4.5167	0.0020405	451.77981723466957	86.544	1.1511	86.693	86.36	87.511	0.14902					59	26	3	0	0	0	0.84341	1	8550	8550		24.203	3.7209	1	150120			36758	10279	24388	24397	41797	41797					0.08719909784736046
MKVRTGVR	8	Unmodified	_MKVRTGVR_					0	0	0		ENSG00000118007|ENST00000383202|STAG1	ENSG00000118007|ENST00000383202|STAG1	ENSG00000118007|ENST00000383202|STAG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.7825927734375	2	473.784379	945.554204	-0.30014	-0.0001422	-2.808	-0.0013304	-3.1082	-0.0014726	473.7828602657225	21.786	0.75253	21.722	21.433	22.185	-0.063837					49	24	3	0	0	0	0.87922	1	659	659		31.955	2.8053	1	95857			36759	3007	24389	24398	41798	41798					0.07924946247794651
MKVVLATH	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MKVVLATH_					1	0	0		ENST00000589796.2_1_17:43247661-43248513:-|nuORF	ENST00000589796.2_1_17:43247661-43248513:-|nuORF	ENST00000589796.2_1_17:43247661-43248513:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76885986328125	2	470.767863	939.521173	-0.31283	-0.00014727	3.0663	0.0014435	2.7534	0.0012962	470.7690962660208	80.864	0.77295	81.286	80.933	81.706	0.4215					52	18	4	0	0	0	0.79403	1	9299	9299		63.306	18.929	1	1358000			36760	14246	24390	24399	41799	41799					0.048993194050581224
MKYIIKKLM	9	Unmodified	_MKYIIKKLM_					0	0	0		ENST00000370708.8_2_6:56967051-56967111:+|nuORF	ENST00000370708.8_2_6:56967051-56967111:+|nuORF	ENST00000370708.8_2_6:56967051-56967111:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	584.3565063476562	2	584.353248	1166.69194	0.73697	0.00043065	4.0248	0.0023519	4.7618	0.0027826	584.3556286390271	92.429	3.0487	92.654	91.107	94.155	0.22547					201	72	4	0	0	0	0.7932	1	9362	9362		25.45	5.4534	1	730880			36761	10645	24391	24400	41800	41800					0.115265137321785
MKYQRKGDQS	10	Unmodified	_MKYQRKGDQS_					0	0	0			REV__nc|ENSG00000107282|Q02410-2|APBA1	REV__nc|ENSG00000107282|Q02410-2|APBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.809814453125	2	620.808779	1239.60301	0.1525	9.4673E-05	-0.82284	-0.00051083	-0.67035	-0.00041616	620.8084857499598	59.522	1.8774	60.075	59.343	61.22	0.55323					109	49	4	0	0	0	0.78666	1	6329	6329		40.058	4.9061	1	3699000	+		36762	17653	24392	24401	41801	41801					-0.007212299737830108
MLAALTGR	8	Unmodified	_MLAALTGR_					0	0	0		nc|ENSG00000165138|Q68DC2-3|ANKS6;ENSG00000165138|ENST00000353234|ANKS6;nc|ENSG00000165138|Q68DC2-4|ANKS6	nc|ENSG00000165138|Q68DC2-3|ANKS6	nc|ENSG00000165138|Q68DC2-3|ANKS6	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	416.737060546875	2	416.739105	831.463658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.219	1	35.257	34.757	35.757	0.038643								0	0	0	0.29498	1	1834	1834		26.796	1.3459	1				36763	6051	24393	24402	41802	41802					0.04118477199494919
MLAESELSGW	10	Unmodified	_MLAESELSGW_					0	0	0		ENSG00000138039|ENST00000294954|LHCGR;nc|ENSG00000138039|P22888-2|LHCGR	ENSG00000138039|ENST00000294954|LHCGR	ENSG00000138039|ENST00000294954|LHCGR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.7579345703125	2	561.760432	1121.50631	-0.27813	-0.00015624	-2.9916	-0.0016806	-3.2697	-0.0018368	561.7585959252343	47.679	1.8663	48.602	48.081	49.948	0.92315					113	46	3	0	0	0	0.18001	1	4558	4558		90.777	0.40684	1	1533000			36764	4260	24394	24403	41803	41803					-0.04958217253602015
MLAGGLLVPR	10	Unmodified	_MLAGGLLVPR_					0	0	0			REV__ENST00000513120.2_1_4:8605677-8612970:+|nuORF	REV__ENST00000513120.2_1_4:8605677-8612970:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.808837890625	2	513.810062	1025.60557	-1.4174	-0.00072826	-0.72923	-0.00037469	-2.1466	-0.0011029	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.86452	1	4165	4165		30.504	3.8107	1	1977600	+		36765	27989	24395	24404	41804	41804					0.09379270221825209
MLAIYLVHG	9	Unmodified	_MLAIYLVHG_					0	0	0		ENST00000468439.2_1_3:132106687-132107131:+|nuORF	ENST00000468439.2_1_3:132106687-132107131:+|nuORF	ENST00000468439.2_1_3:132106687-132107131:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.1688537597656	2	508.783513	1015.55247	0.44758	0.00022772	1.6539	0.00084149	2.1015	0.0010692	508.7841981117534	53.486	0.83719	54.1	53.819	54.656	0.61436					26	19	2	0	0	0	0.20789	1	5414	5414		29.842	0	1	306510			36766	12178	24396	24405	41805	41805					0.04531892439172225
MLAKRKPPA	9	Unmodified	_MLAKRKPPA_					0	0	0		nc|ENSG00000146872|Q86UE8-3|TLK2;ENSG00000146872|ENST00000346027|TLK2;nc|ENSG00000146872|Q86UE8|TLK2;ENST00000530992.1_1_17:32364642-32365872:-|nuORF;ENST00000414066.1_1_10:38107898-38108846:-|nuORF	nc|ENSG00000146872|Q86UE8-3|TLK2;ENST00000530992.1_1_17:32364642-32365872:-|nuORF;ENST00000414066.1_1_10:38107898-38108846:-|nuORF	nc|ENSG00000146872|Q86UE8-3|TLK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3102722167969	2	506.310229	1010.60591	-0.49937	-0.00025284	-2.1044	-0.0010655	-2.6037	-0.0013183	506.30921071470516	49.299	2.411	49.324	47.87	50.281	0.025578					89	62	2	0	0	0	0.77546	1	3674	3674		31.955	2.8053	1	190740			36767	4867;13352;11358	24397	24406	41806	41806					0.1010268994167518
MLAKRKPPA	9	Unmodified	_MLAKRKPPA_					0	0	0		nc|ENSG00000146872|Q86UE8-3|TLK2;ENSG00000146872|ENST00000346027|TLK2;nc|ENSG00000146872|Q86UE8|TLK2;ENST00000530992.1_1_17:32364642-32365872:-|nuORF;ENST00000414066.1_1_10:38107898-38108846:-|nuORF	nc|ENSG00000146872|Q86UE8-3|TLK2;ENST00000530992.1_1_17:32364642-32365872:-|nuORF;ENST00000414066.1_1_10:38107898-38108846:-|nuORF	nc|ENSG00000146872|Q86UE8-3|TLK2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.311767578125	2	506.310229	1010.60591	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.794	1	53.731	53.231	54.231	-0.062065								0	0	0	0.2969	1	4419	4419		31.955	1.4512	1				36768	4867;13352;11358	24397	24406	41807	41807					0.1010268994167518
MLAPNRDD	8	Unmodified	_MLAPNRDD_					0	0	0		nc|ENSG00000168016|O15050|TRANK1;ENSG00000168016|ENST00000645898|TRANK1	nc|ENSG00000168016|O15050|TRANK1	nc|ENSG00000168016|O15050|TRANK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.77734375	2	466.218734	930.422915	-0.7199	-0.00033563	4.487	0.0020919	3.7671	0.0017563	466.22053073600915	82.719	0.20643	83.15	83.046	83.253	0.43108					6	4	2	0	0	0	0.4196	1	9581	9581		25.45	0	1	50824			36769	6357	24398	24407	41808	41808					-0.04507908910795777
MLARVAQLMA	10	Unmodified	_MLARVAQLMA_					0	0	0			REV__nc|ENSG00000066405|P56856-2|CLDN18	REV__nc|ENSG00000066405|P56856-2|CLDN18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.308837890625	2	552.306829	1102.59911	-1.3227	-0.00073051	2.4735	0.0013661	1.1508	0.00063559	552.3087859493843	59.531	0.60354	59.922	59.651	60.254	0.39077					35	14	3	0	0	0	0.43769	1	6297	6297		60.972	9.7792	1	182440	+		36770	16522	24399	24408	41809	41809					0.051910089988041364
MLARVAQLMA	10	Unmodified	_MLARVAQLMA_					0	0	0			REV__nc|ENSG00000066405|P56856-2|CLDN18	REV__nc|ENSG00000066405|P56856-2|CLDN18	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	552.306829	1102.59911	-0.55216	-0.00030496	2.7428	0.0015149	2.1907	0.0012099	552.308873454581	59.467	0.58533	60.02	59.653	60.239	0.55323	0.04913	0.00014395	NaN	60.972	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	216860	+		36771	16522	24399	24408							0.051910089988041364
MLAVKTELP	9	Unmodified	_MLAVKTELP_					0	0	0		ENSG00000100987|ENST00000376709|VSX1;nc|ENSG00000100987|Q9NZR4-6|VSX1;nc|ENSG00000100987|Q9NZR4-7|VSX1;nc|ENSG00000100987|Q9NZR4-2|VSX1;nc|ENSG00000100987|Q9NZR4-5|VSX1;nc|ENSG00000100987|Q9NZR4-8|VSX1;nc|ENSG00000100987|Q9NZR4-3|VSX1	ENSG00000100987|ENST00000376709|VSX1	ENSG00000100987|ENST00000376709|VSX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2903137207031	2	501.288628	1000.5627	1.1291	0.00056599	2.4986	0.0012525	3.6277	0.0018185	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.76764	1	9186	9186		34.173	1.3601	1	9883700			36772	1890	24400	24409	41810	41810					0.06244455373735036
MLAVKTELP	9	Unmodified	_MLAVKTELP_					0	0	0		ENSG00000100987|ENST00000376709|VSX1;nc|ENSG00000100987|Q9NZR4-6|VSX1;nc|ENSG00000100987|Q9NZR4-7|VSX1;nc|ENSG00000100987|Q9NZR4-2|VSX1;nc|ENSG00000100987|Q9NZR4-5|VSX1;nc|ENSG00000100987|Q9NZR4-8|VSX1;nc|ENSG00000100987|Q9NZR4-3|VSX1	ENSG00000100987|ENST00000376709|VSX1	ENSG00000100987|ENST00000376709|VSX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29046630859375	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.77546	1	8897	8897		31.955	0	1	9566900			36773	1890	24400	24409	41811	41811					0.06244455373735036
MLAVLVSLVG	10	Unmodified	_MLAVLVSLVG_					0	0	0			REV__nc|ENSG00000123191|P35670-2|ATP7B	REV__nc|ENSG00000123191|P35670-2|ATP7B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.29022216796875	2	501.306821	1000.59909	-0.53023	-0.00026581	4.4685	0.0022401	3.9383	0.0019743	501.3096599444415	84.377	0.17308	84.436	84.371	84.544	0.05925					5	3	2	0	0	0	0.37624	1	8525	8525		16.473	5.6076	1	11351	+		36774	29819	24401	24410	41812	41812					0.09881332270458643
MLAVVIFF	8	Unmodified	_MLAVVIFF_					0	0	0		ENSG00000197849|ENST00000641972|OR8G1	ENSG00000197849|ENST00000641972|OR8G1	ENSG00000197849|ENST00000641972|OR8G1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.2694091796875	2	470.27225	938.529947	1.0926	0.00051384	-1.313	-0.00061747	-0.22037	-0.00010363	470.27159576530556	91.919	2.3675	92.368	91.756	94.123	0.44959					104	55	3	0	0	0	0.88393	1	10926	10926		33.493	6.8001	1	778610			36775	8205	24402	24411	41813	41813					0.05822293041535431
MLCVQYLPK	9	Unmodified	_MLCVQYLPK_					0	0	0		ENST00000415095.5_2_2:110303401-110303572:-|nuORF	ENST00000415095.5_2_2:110303401-110303572:-|nuORF	ENST00000415095.5_2_2:110303401-110303572:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.791015625	2	547.790481	1093.56641	-1.6275	-0.00089151	1.3454	0.00073697	-0.28211	-0.00015454	547.7908060663306	58.949	0.53439	59.341	59.234	59.768	0.39209					26	12	4	0	0	0	0.25483	1	6201	6201		68.787	12.353	1	566360			36776	11374	24403	24412	41814	41814					0.023368018759356346
MLCVQYLPK	9	Unmodified	_MLCVQYLPK_					0	0	0		ENST00000415095.5_2_2:110303401-110303572:-|nuORF	ENST00000415095.5_2_2:110303401-110303572:-|nuORF	ENST00000415095.5_2_2:110303401-110303572:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	547.790481	1093.56641	-0.32571	-0.00017842	0.20181	0.00011055	-0.1239	-6.7871E-05	547.7909213570138	58.838	0.4333	59.391	59.3	59.733	0.55323	0.024878	-0.00063918	NaN	68.787	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	594100			36777	11374	24403	24412							0.023368018759356346
MLDESVIIQ	9	Unmodified	_MLDESVIIQ_					0	0	0		nc|ENSG00000111667|P45974-2|USP5;ENSG00000111667|ENST00000229268|USP5;ENST00000537267.5_1_12:6966716-6975238:+|nuORF;ENST00000542371.1_1_12:6972998-6973244:+|nuORF	nc|ENSG00000111667|P45974-2|USP5	nc|ENSG00000111667|P45974-2|USP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2713012695312	2	524.273175	1046.5318	0.068728	3.6032E-05	-3.8279	-0.0020069	-3.7592	-0.0019708	524.2709698918767	75.989	0.87818	76.558	76.184	77.062	0.56836					57	21	4	0	0	0	0.28163	1	8666	8666		66.429	4.3219	1	1616600			36778	2598	24404	24413	41815	41815					0.010392572688488144
MLDILIKHLVK	11	Unmodified	_MLDILIKHLVK_					0	0	0		ENSG00000165895|ENST00000298815|ARHGAP42	ENSG00000165895|ENST00000298815|ARHGAP42	ENSG00000165895|ENST00000298815|ARHGAP42	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7881164550781	3	441.612464	1321.81556	-0.74321	-0.00032821	-1.0677	-0.00047151	-1.8109	-0.00079973	441.6128247999778	38.334	0.20016	38.676	38.537	38.737	0.34187					7	4	2	0	0	0	0.17289	1	3151	3151		27.644	0	1	16325			36779	6133	24405	24414	41816	41816					0.16752888104110752
MLDKLTSVFDP	11	Unmodified	_MLDKLTSVFDP_					0	0	0		ENST00000482189.1_1_12:100403505-100403562:-|nuORF	ENST00000482189.1_1_12:100403505-100403562:-|nuORF	ENST00000482189.1_1_12:100403505-100403562:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.8988037109375	2	633.325939	1264.63732	-0.016162	-1.0236E-05	2.6098	0.0016529	2.5937	0.0016426	633.327060704582	111.14	0.56624	111.14	110.83	111.4	0					38	18	3	0	0	0	0.732	1	11533	11533		26.063	0.48933	1	45765			36780	12483	24406	24415	41817	41817					0.015591733944347652
MLDKVIKAG	9	Unmodified	_MLDKVIKAG_					0	0	0			REV__ENSG00000102144|ENST00000373316|PGK1	REV__ENSG00000102144|ENST00000373316|PGK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7904357910156	2	487.788795	973.563038	-0.71212	-0.00034736	4.1832	0.0020405	3.4711	0.0016932	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.76255	1	7865	7865		35.618	0	1	678280	+		36781	17327	24407	24416	41818	41818					0.07519875093601058
MLDPLEVHL	9	Oxidation (M)	_M(Oxidation (M))LDPLEVHL_		M(1)LDPLEVHL		M(110)LDPLEVHL	0	0	1		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.7811889648438	2	541.781167	1081.54778	-1.4459	-0.00078334	1.7907	0.00097019	0.34489	0.00018685	541.7819638717742	72.153	1.0386	72.539	72.209	73.248	0.38581					47	24	3	0	0	0	0.041233	3	8060	8036;8046;8060		111.65	45.219	1	744800			36782	6918	24408	24417	41819;41820;41821	41821		119			0.01026963505751155
MLDPLEVHL	9	Oxidation (M)	_M(Oxidation (M))LDPLEVHL_		M(1)LDPLEVHL		M(120)LDPLEVHL	0	0	1		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.7811279296875	2	541.781167	1081.54778	-0.38195	-0.00020693	0.56523	0.00030623	0.18328	9.9297E-05	541.7813468660355	71.985	1.1562	72.536	72.195	73.351	0.55008					49	27	3	0	0	0	0.027997	3	8051	8051;8063;8075		119.56	52.481	1	925520			36783	6918	24408	24417	41822;41823;41824	41822		119			0.01026963505751155
MLDPLEVHL	9	Oxidation (M)	_M(Oxidation (M))LDPLEVHL_		M(1)LDPLEVHL		M(110)LDPLEVHL	0	0	1		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.283935546875	2	541.781167	1081.54778	-0.34472	-0.00018676	2.0171	0.0010928	1.6724	0.00090606	542.2837952148026	74.262	1.4917	74.821	74.283	75.775	0.55891					81	35	4	0	0	0	0.053315	2	8405	8405;8417		106.42	21.5	1	471090			36784	6918	24408	24417	41825;41826	41825		119			0.01026963505751155
MLDPLEVHL	9	Oxidation (M)	_M(Oxidation (M))LDPLEVHL_					0	0	1		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	541.781167	1081.54778	-0.91508	-0.00049577	2.6249	0.0014221	1.7099	0.00092637	542.2839532573068	74.443	1.8253	74.834	74.248	76.073	0.39111	0.0063523	0.00030828	NaN	106.42	99	43	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	565700			36785	6918	24408	24417				119			0.01026963505751155
MLDPLEVHL	9	Unmodified	_MLDPLEVHL_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.7833862304688	2	533.78371	1065.55287	0.18712	9.988E-05	-0.091377	-4.8775E-05	0.095739	5.1104E-05	533.7834938987293	78.7	0.89143	79.11	78.717	79.609	0.4106					54	20	4	0	0	0	0.0039032	5	8990	8969;8978;8990;9002;9016		138.24	55.937	1	2187500			36786	6918	24408	24418	41827;41828;41829;41830;41831	41829					0.02271267368359986
MLDPLEVHL	9	Unmodified	_MLDPLEVHL_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.7832641601562	2	533.78371	1065.55287	-0.26117	-0.00013941	0.57808	0.00030857	0.31691	0.00016916	533.783872308253	78.56	0.80212	79.123	78.742	79.544	0.56332					59	18	4	0	0	0	0.041233	5	9028	8982;8993;9004;9016;9028		111.65	39.771	1	2595700			36787	6918	24408	24418	41832;41833;41834;41835;41836	41836					0.02271267368359986
MLDTFEVC	8	Unmodified	_MLDTFEVC_					0	0	0		ENST00000379205.4_1_4:159589110-159589200:-|nuORF	ENST00000379205.4_1_4:159589110-159589200:-|nuORF	ENST00000379205.4_1_4:159589110-159589200:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774353027344	2	479.206447	956.39834	-0.83572	-0.00040048	-1.7159	-0.00082228	-2.5516	-0.0012228	479.20534015882487	83.927	0.12508	84.092	84.009	84.134	0.1651					4	2	2	0	0	0	0.4196	1	8140	8140		13.775	4.3048	1	14664			36788	10884	24409	24419	41837	41837					-0.081603051085267
MLFHPGLP	8	Unmodified	_MLFHPGLP_					0	0	0			REV__nc|ENSG00000167280|Q8NFI3-3|ENGASE	REV__nc|ENSG00000167280|Q8NFI3-3|ENGASE	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.5664367675781	2	456.244024	910.473494	-0.2892	-0.00013194	-1.9236	-0.00087762	-2.2128	-0.0010096	456.24502693208586	30.296	0.24742	30.249	30.099	30.347	-0.047062					6	5	2	0	0	0	0.4196	1	1646	1646		24.504	0.30126	1	5191.6	+		36789	30008	24410	24420	41838	41838					0.014676652048592587
MLFKVAVN	8	Unmodified	_MLFKVAVN_					0	0	0			REV__ENSG00000169410|ENST00000618819|PTPN9	REV__ENSG00000169410|ENST00000618819|PTPN9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	461.2650451660156	2	461.264956	920.515359	-0.1247	-5.752E-05	0.44796	0.00020663	0.32326	0.00014911	461.2649815864835	93.17	1.5107	93.239	92.756	94.266	0.06987					100	35	4	0	0	0	0.84341	1	9659	9659		24.203	0	1	1215800	+		36790	21578	24411	24421	41839	41839					0.051922208933888214
MLFKVAVN	8	Unmodified	_MLFKVAVN_					0	0	0			REV__ENSG00000169410|ENST00000618819|PTPN9	REV__ENSG00000169410|ENST00000618819|PTPN9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.26495361328125	2	461.264956	920.515359	1.7427	0.00080384	-1.626	-0.00075004	0.11663	5.3797E-05	461.26406026180877	93.142	1.6342	93.081	92.591	94.226	-0.061432					103	38	3	0	0	0	0.85277	1	9876	9876		25.45	1.9275	1	1239800	+		36791	21578	24411	24421	41840	41840					0.051922208933888214
MLFLAIAPG	9	Unmodified	_MLFLAIAPG_					0	0	0			REV__nc|ENSG00000211783|A0A075B6T8|TRAV9-1	REV__nc|ENSG00000211783|A0A075B6T8|TRAV9-1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.7679443359375	2	466.767332	931.52011	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.31	1	75.442	74.942	75.942	0.13208								0	0	0	0.30219	1	7002	7002		29.842	5.3375	1		+		36792	30188	24412	24422	41841	41841					0.051611050361543676
MLFLATFF	8	Unmodified	_MLFLATFF_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENSG00000105677|ENST00000222284|TMEM147;ENST00000593027.6_1_19:36036533-36038346:+|nuORF;ENST00000595180.5_1_19:36036641-36037580:+|nuORF;ENST00000477168.6_1_19:36036641-36037810:+|nuORF	nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENST00000477168.6_1_19:36036641-36037810:+|nuORF	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25726318359375	2	495.261882	988.509211	-2.6631	-0.0013189	-2.9397	-0.0014559	-5.6028	-0.0027749	495.26028573461133	40.858	1.9733	41.25	40.867	42.841	0.39209					105	53	3	0	0	0	0.86791	1	3483	3483		28.254	4.0515	1	8396000			36793	2241;12353	24413	24423	41842	41842					0.014497026618755626
MLFTSHRC	8	Unmodified	_MLFTSHRC_					0	0	0		ENST00000497384.1_1_1:24710390-24710465:-|nuORF	ENST00000497384.1_1_1:24710390-24710465:-|nuORF	ENST00000497384.1_1_1:24710390-24710465:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.730224609375	2	497.733497	993.452441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.685	1	29.642	29.142	30.142	-0.043095								0	0	0	0.29353	1	1565	1565		28.254	2.8041	1				36794	12803	24414	24424	41843	41843					-0.04454668166306419
MLGGLIRG	8	Unmodified	_MLGGLIRG_					0	0	0		ENST00000486565.1_1_3:52028979-52029216:-|nuORF	ENST00000486565.1_1_3:52028979-52029216:-|nuORF	ENST00000486565.1_1_3:52028979-52029216:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.7391662597656	2	408.741648	815.468743	-1.9104	-0.00078087	-2.9162	-0.001192	-4.8266	-0.0019728	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.86791	1	2128	2128		28.254	0	1	1364200			36795	12582	24415	24425	41844	41844					0.053627810621151184
MLGIAPNLA	9	Unmodified	_MLGIAPNLA_					0	0	0		ENSG00000138604|ENST00000261858|GLCE	ENSG00000138604|ENST00000261858|GLCE	ENSG00000138604|ENST00000261858|GLCE	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2742614746094	2	450.254588	898.494624	-1.7763	-0.00079979	-1.8688	-0.00084142	-3.6451	-0.0016412	450.25416282576487	92.895	0.24492	93.088	92.862	93.107	0.19239					9	5	2	0	0	0	0.20789	1	9357	9357		11.511	0	1	265770			36796	4306	24416	24426	41845	41845					0.04131630513734308
MLGISESEQR	10	Unmodified	_MLGISESEQR_					0	0	0		nc|ENSG00000133454|Q8IUG5-2|MYO18B;ENSG00000133454|ENST00000335473|MYO18B;nc|ENSG00000133454|Q8IUG5-3|MYO18B	nc|ENSG00000133454|Q8IUG5-2|MYO18B	nc|ENSG00000133454|Q8IUG5-2|MYO18B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8431396484375	2	575.282063	1148.54957	-1.3697	-0.00078794	3.887	0.0022361	2.5173	0.0014482	575.7859287841009	92.251	0.46797	92.437	92.174	92.642	0.18582					20	10	3	0	0	0	0.37624	1	9274	9274		32.812	0	1	48866			36797	3879	24417	24427	41846	41846					-0.01876027476305353
MLGITYRNKSL	11	Unmodified	_MLGITYRNKSL_					0	0	0		ENSG00000054219|ENST00000263636|LY75;nc|ENSG00000054219|O60449-3|LY75;nc|ENSG00000054219|O60449-2|LY75	ENSG00000054219|ENST00000263636|LY75	ENSG00000054219|ENST00000263636|LY75	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.392822265625	2	648.360647	1294.70674	2.6466	0.001716	2.9655	0.0019227	5.6122	0.0036387	648.3618754580468	107.33	0.53748	107.3	106.93	107.46	-0.034134					16	12	2	0	0	0	0.17536	1	11889	11889		16.717	0	1	237650			36798	1016	24418	24428	41847	41847					0.07117677133874167
MLGLSIILN	9	Unmodified	_MLGLSIILN_					0	0	0		ENST00000379953.6_1_6:6649869-6654873:+|nuORF	ENST00000379953.6_1_6:6649869-6654873:+|nuORF	ENST00000379953.6_1_6:6649869-6654873:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.29254150390625	2	487.291171	972.567789	-0.085833	-4.1825E-05	4.2446	0.0020684	4.1588	0.0020265	487.29311557745604	91.223	2.7335	91.293	90.723	93.457	0.069328					138	65	3	0	0	0	0.76255	1	9349	9349		35.618	2.8059	1	2116800			36799	10906	24419	24429	41848	41848					0.08040759236348549
MLGPGQVR	8	Unmodified	_MLGPGQVR_					0	0	0		nc|ENSG00000203666|Q5VUJ9|EFCAB2	nc|ENSG00000203666|Q5VUJ9|EFCAB2	nc|ENSG00000203666|Q5VUJ9|EFCAB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.2357177734375	2	429.23673	856.458907	-0.96904	-0.00041595	-1.3817	-0.00059307	-2.3507	-0.001009	429.23600225893705	63.259	2.2189	63.282	62.72	64.938	0.022984					256	90	4	0	0	0	0.88915	1	5532	5532		35.201	0	1	5703300			36800	15204	24420	24430	41849	41849					0.02493593056726695
MLGPLAPVF	9	Unmodified	_MLGPLAPVF_					0	0	0		ENST00000432869.5_1_2:36780308-36781346:-|nuORF	ENST00000432869.5_1_2:36780308-36781346:-|nuORF	ENST00000432869.5_1_2:36780308-36781346:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7674255371094	2	472.767332	943.52011	-1.1355	-0.00053681	0.9406	0.00044468	-0.19486	-9.2123E-05	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.7932	1	7862	7862		21.702	1.2205	1	292450			36801	11676	24421	24431	41850	41850					0.04609105036161054
MLGTLLPKP	9	Unmodified	_MLGTLLPKP_					0	0	0			REV__nc|ENSG00000115275|Q13724-2|MOGS	REV__nc|ENSG00000115275|Q13724-2|MOGS	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.2861022949219	2	485.293714	968.572874	-2.5795	-0.0012518	-2.8633	-0.0013895	-5.4428	-0.0026414	485.2939205586135	42.135	0.66775	42.139	41.912	42.58	0.0034142					24	15	2	0	0	0	0.20789	1	3170	3170		17.365	0	1	116720	+		36802	18104	24422	24432	41851	41851					0.08733063098964067
MLGVPRFGLN	10	Unmodified	_MLGVPRFGLN_					0	0	0			REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.3062744140625	2	552.305144	1102.59573	0.7768	0.00042903	1.633	0.00090193	2.4098	0.001331	552.3060097260034	92.551	2.2776	92.998	91.922	94.2	0.44661					137	53	3	0	0	0	0.8608	1	10995	10995		34.173	6.2903	1	579750	+		36803	18297	24423	24433	41852	41852					0.04854082216456845
MLHLKELG	8	Unmodified	_MLHLKELG_					0	0	0		ENSG00000170382|ENST00000367177|LRRN2;ENSG00000173114|ENST00000308478|LRRN3	ENSG00000170382|ENST00000367177|LRRN2;ENSG00000173114|ENST00000308478|LRRN3	ENSG00000170382|ENST00000367177|LRRN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7691650390625	2	470.767863	939.521173	-1.6346	-0.00076952	4.2064	0.0019802	2.5717	0.0012107	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.9295	1	4126	4126		55.504	7.5886	1	1359900			36804	6581;6828	24424	24434	41853	41853					0.048993194050581224
MLHPAAPGPR	10	Unmodified	_MLHPAAPGPR_					0	0	0		ENST00000530267.5_2_11:77899860-77900121:+|nuORF	ENST00000530267.5_2_11:77899860-77900121:+|nuORF	ENST00000530267.5_2_11:77899860-77900121:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3035278320312	2	523.781836	1045.54912	-1.2876	-0.00067443	3.9476	0.0020677	2.66	0.0013933	523.7840510431568	89.45	0.9442	89.921	89.195	90.139	0.47068					24	22	2	0	0	0	0.37624	1	10534	10534		38.806	10.924	1	134930			36805	13344	24425	24435	41854	41854					0.02816642385164414
MLHQFISYLLV	11	Unmodified	_MLHQFISYLLV_					0	0	0			REV__ENST00000383314.6_1_18:13760267-13760498:+|nuORF	REV__ENST00000383314.6_1_18:13760267-13760498:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.2575988769531	3	455.252936	1362.73698	-0.29838	-0.00013584	0.22483	0.00010235	-0.073549	-3.3483E-05	455.25305077973036	29.109	0.61061	29.07	28.752	29.362	-0.039907					48	23	3	0	0	0	0.68532	1	1512	1512		33.922	0.88223	1	42225	+		36806	25984	24426	24436	41855	41855					0.07012035799061778
MLHVSVPLF	9	Unmodified	_MLHVSVPLF_					0	0	0			REV__ENST00000481999.1_1_17:7813558-7814900:+|nuORF	REV__ENST00000481999.1_1_17:7813558-7814900:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7928466796875	2	521.791338	1041.56812	0.0019991	1.0431E-06	2.6421	0.0013786	2.6441	0.0013797	521.7925613715433	78.41	0.88516	78.973	78.659	79.544	0.56332					42	20	3	0	0	0	0.58151	1	8996	8996		47.916	5.5195	1	817570	+		36807	27457	24427	24437	41856	41856					0.04900178956177115
MLHVSVPLF	9	Unmodified	_MLHVSVPLF_					0	0	0			REV__ENST00000481999.1_1_17:7813558-7814900:+|nuORF	REV__ENST00000481999.1_1_17:7813558-7814900:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	521.791338	1041.56812	0.51766	0.00027011	1.8914	0.00098693	2.4091	0.001257	521.7921709358651	78.532	0.84686	78.943	78.592	79.439	0.4106	-0.015282	-0.00035856	NaN	47.916	40	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	718400	+		36808	27457	24427	24437							0.04900178956177115
MLIAAVFY	8	Unmodified	_MLIAAVFY_					0	0	0		nc|ENSG00000088766|Q9UJA2-2|CRLS1;ENSG00000088766|ENST00000378863|CRLS1	nc|ENSG00000088766|Q9UJA2-2|CRLS1	nc|ENSG00000088766|Q9UJA2-2|CRLS1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.6524658203125	2	464.254057	926.493561	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.271	1	73.311	72.811	73.811	0.040024								0	0	0	0.29725	1	7000	7000		24.504	4.0222	1				36809	1593	24428	24438	41857	41857					0.02737416144816507
MLIAAVFY	8	Unmodified	_MLIAAVFY_					0	0	0		nc|ENSG00000088766|Q9UJA2-2|CRLS1;ENSG00000088766|ENST00000378863|CRLS1	nc|ENSG00000088766|Q9UJA2-2|CRLS1	nc|ENSG00000088766|Q9UJA2-2|CRLS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2533874511719	2	464.254057	926.493561	-1.467	-0.00068104	1.2482	0.00057946	-0.21881	-0.00010158	464.25450213652135	80.516	0.77847	80.621	80.13	80.909	0.10526					59	23	4	0	0	0	0.91333	1	7643	7643		43.626	0	1	320700			36810	1593	24428	24438	41858	41858					0.02737416144816507
MLIKAKLDS	9	Unmodified	_MLIKAKLDS_					0	0	0		nc|ENSG00000070081|P80303-2|NUCB2;ENSG00000070081|ENST00000529010|NUCB2	nc|ENSG00000070081|P80303-2|NUCB2	nc|ENSG00000070081|P80303-2|NUCB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8037109375	2	509.801903	1017.58925	-0.38177	-0.00019462	3.8836	0.0019799	3.5019	0.0017853	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.64922	1	8281	8281		44.117	10.601	1	948010			36811	1232	24429	24439	41859	41859					0.08116144265068215
MLIKAKLDS	9	Unmodified	_MLIKAKLDS_					0	0	0		nc|ENSG00000070081|P80303-2|NUCB2;ENSG00000070081|ENST00000529010|NUCB2	nc|ENSG00000070081|P80303-2|NUCB2	nc|ENSG00000070081|P80303-2|NUCB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8034362792969	2	509.801903	1017.58925	-0.073627	-3.7535E-05	3.6181	0.0018445	3.5444	0.001807	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.69624	1	10163	10163		40.778	5.5774	1	3087300			36812	1232	24429	24439	41860	41860					0.08116144265068215
MLILPRILNL	10	Unmodified	_MLILPRILNL_					0	0	0			REV__ENST00000531443.5_1_8:107696561-107715155:+|nuORF	REV__ENST00000531443.5_1_8:107696561-107715155:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3768920898438	2	598.383394	1194.75224	-1.7641	-0.0010556	-1.5674	-0.00093793	-3.3316	-0.0019936	598.3824318861281	41.194	0.78385	41.828	41.496	42.28	0.6339					56	21	3	0	0	0	0.85939	1	3575	3575		23.042	0	1	4475400	+		36813	28300	24430	24440	41861	41861					0.16264947386912354
MLILRKMK	8	Unmodified	_MLILRKMK_					0	0	0		ENST00000392365.5_2_2:188361787-188368434:-|nuORF	ENST00000392365.5_2_2:188361787-188368434:-|nuORF	ENST00000392365.5_2_2:188361787-188368434:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.8281860351562	2	516.824658	1031.63476	-0.046472	-2.4018E-05	1.4317	0.00073994	1.3852	0.00071592	517.3267654803483	108.96	0.7654	108.91	108.37	109.14	-0.049324					56	31	2	0	0	0	0.86791	1	11871	11871		28.254	5.2176	1	1190900			36814	11017	24431	24441	41862	41862					0.12021091246447213
MLILVPSYP	9	Unmodified	_MLILVPSYP_					0	0	0			REV__nc|ENSG00000197168|Q6P3R8|NEK5	REV__nc|ENSG00000197168|Q6P3R8|NEK5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7932739257812	2	516.793546	1031.57254	0.67669	0.00034971	-1.143	-0.00059067	-0.46626	-0.00024096	516.7929283696592	86.202	2.6305	86.258	84.584	87.215	0.055641					143	60	4	0	0	0	0.78851	1	8847	8847		28.254	1.4582	1	319120	+		36815	30134	24432	24442	41863	41863					0.05801643379095367
MLILVTANN	9	Unmodified	_MLILVTANN_					0	0	0		ENSG00000198786|ENST00000361567|MT-ND5	ENSG00000198786|ENST00000361567|MT-ND5	ENSG00000198786|ENST00000361567|MT-ND5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.78070068359375	2	494.778428	987.542302	0.77019	0.00038107	2.7304	0.001351	3.5006	0.001732	494.77966004867045	84.042	2.7013	83.973	82.365	85.067	-0.069313					89	62	2	0	0	0	0.76764	1	8528	8528		34.173	2.6427	1	283830			36816	8332	24433	24443	41864	41864					0.04803284713909761
MLIQGILDK	9	Unmodified	_MLIQGILDK_					0	0	0			REV__nc|ENSG00000130939|O95155-3|UBE4B	REV__nc|ENSG00000130939|O95155-3|UBE4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.7999267578125	2	515.801903	1029.58925	-0.28373	-0.00014635	-3.2003	-0.0016507	-3.4841	-0.0017971	515.8000870732274	54.399	0.96269	54.984	54.585	55.548	0.58474					62	22	4	0	0	0	0.28163	1	5584	5584		66.429	2.222	1	1350500	+		36817	18920	24434	24444	41865	41865					0.07564144265074901
MLISPRVGWP	10	Unmodified	_MLISPRVGWP_					0	0	0			REV__ENST00000263367.7_2_19:41798159-41798273:+|nuORF	REV__ENST00000263367.7_2_19:41798159-41798273:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.3201293945312	2	578.320794	1154.62703	-1.36	-0.00078649	0.98774	0.00057123	-0.37222	-0.00021526	578.3215937705486	92.438	2.8262	92.624	91.324	94.15	0.18582					174	66	3	0	0	0	0.74274	1	9217	9217		42.396	2.338	1	562630	+		36818	24445	24435	24445	41866	41866					0.05590655250534837
MLISWKGT	8	Unmodified	_MLISWKGT_					0	0	0			REV__ENST00000406785.6_1_2:40656510-40656594:-|nuORF	REV__ENST00000406785.6_1_2:40656510-40656594:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.2552490234375	2	468.254588	934.494624	-1.0017	-0.00046905	1.616	0.00075668	0.61426	0.00028763	468.2552173631195	81.886	3.8728	82.031	80.973	84.845	0.14513					157	90	2	0	0	0	0.89962	1	8013	8013		38.806	4.6336	1	195040	+		36819	26308	24436	24446	41867	41867					0.02475630513742999
MLIVLSLW	8	Unmodified	_MLIVLSLW_					0	0	0			REV__nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	REV__nc|ENSG00000283761|Q9Y2D2-3|SLC35A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7909851074219	2	487.790807	973.56706	-0.085708	-4.1808E-05	-0.51587	-0.00025164	-0.60158	-0.00029345	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.88915	1	7950	7950		35.201	0	1	514950	+		36820	18274	24437	24447	41868	41868					0.07921964587308139
MLKAKKLHG	9	Unmodified	_MLKAKKLHG_					0	0	0			REV__nc|ENSG00000119608|Q3B8N5|PROX2	REV__nc|ENSG00000119608|Q3B8N5|PROX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3174438476562	2	513.318054	1024.62156	-0.86606	-0.00044456	-2.6243	-0.0013471	-3.4903	-0.0017916	513.3165332025184	43.367	1.6866	43.367	42.894	44.58	0.00016785					82	40	3	0	0	0	0.7932	1	3306	3306		25.45	6.0902	1	411860	+		36821	18361	24438	24448	41869	41869					0.1102297645870749
MLKAKKLHG	9	Unmodified	_MLKAKKLHG_					0	0	0			REV__nc|ENSG00000119608|Q3B8N5|PROX2	REV__nc|ENSG00000119608|Q3B8N5|PROX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8200073242188	2	513.318054	1024.62156	-0.34905	-0.00017917	-2.2187	-0.0011389	-2.5678	-0.0013181	513.8184615031363	53.608	1.3919	53.546	53.049	54.441	-0.062065					64	37	3	0	0	0	0.7932	1	4406	4406		26.796	3.7536	1	277190	+		36822	18361	24438	24448	41870	41870					0.1102297645870749
MLKALPPA	8	Unmodified	_MLKALPPA_					0	0	0		ENSG00000160298|ENST00000291691|C21orf58;nc|nan|P58505-2|C21orf58;nc|nan|P58505-3|C21orf58	ENSG00000160298|ENST00000291691|C21orf58	ENSG00000160298|ENST00000291691|C21orf58	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.7558898925781	2	420.754224	839.493896	2.8224	0.0011875	-0.38051	-0.0001601	2.4419	0.0010274	420.75391516461383	21.105	1.6401	21.041	20.066	21.706	-0.064058					103	72	2	0	0	0	0.80963	1	559	559		15.636	5.4514	1	85377			36823	5576	24439	24449	41871	41871					0.06772835864660465
MLKAVILIG	9	Unmodified	_MLKAVILIG_					0	0	0		ENSG00000144591|ENST00000313597|GMPPA;nc|ENSG00000144591|Q96IJ6-2|GMPPA;ENST00000481170.1_1_2:220364697-220365012:+|nuORF	ENSG00000144591|ENST00000313597|GMPPA	ENSG00000144591|ENST00000313597|GMPPA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2773742675781	2	479.311906	956.60926	-1.5483	-0.00074214	1.3587	0.00065123	-0.18966	-9.0908E-05	479.31238610876824	84.269	0.47697	84.419	83.973	84.45	0.14952					11	10	2	0	0	0	0.20789	1	8097	8097		19.36	1.0356	1	37440			36824	4720	24440	24450	41872	41872					0.12921939995692355
MLKKEKIFKS	10	Unmodified	_MLKKEKIFKS_					0	0	0			REV__nc|ENSG00000133026|P35580|MYH10	REV__nc|ENSG00000133026|P35580|MYH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.92242431640625	3	417.921298	1250.74206	2.7179	0.0011359	-0.33896	-0.00014166	2.3789	0.00099421	417.9211507262476	105.91	2.7799	105.88	105.06	107.84	-0.03714					241	65	4	0	0	0	0.8505	1	11808	11808		18.531	5.077	1	23169000	+		36825	19050	24441	24451	41873	41873					0.12672339661639853
MLKKEKIFKS	10	Unmodified	_MLKKEKIFKS_					0	0	0			REV__nc|ENSG00000133026|P35580|MYH10	REV__nc|ENSG00000133026|P35580|MYH10	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.92083740234375	3	417.921298	1250.74206	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.085	1	63.051	62.551	63.551	-0.033714								0	0	0	0.45132	1	5979	5979		14.694	0	1		+		36826	19050	24441	24451	41874	41874					0.12672339661639853
MLKKEKIFKS	10	Unmodified	_MLKKEKIFKS_					0	0	0			REV__nc|ENSG00000133026|P35580|MYH10	REV__nc|ENSG00000133026|P35580|MYH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.9225158691406	3	417.921298	1250.74206	3.1807	0.0013293	-0.77614	-0.00032436	2.4045	0.0010049	417.9209605426618	105.73	2.7025	105.77	104.99	107.7	0.038322					262	63	6	0	0	0	0.8505	2	11646	11646;11678		26.75	15.752	1	23553000	+		36827	19050	24441	24451	41875;41876	41875					0.12672339661639853
MLKKRAPPA	9	Unmodified	_MLKKRAPPA_					0	0	0		ENSG00000179057|ENST00000513874|IGSF22;nc|ENSG00000179057|Q8N9C0|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.30780029296875	2	506.310229	1010.60591	-0.51798	-0.00026226	-1.5259	-0.00077259	-2.0439	-0.0010348	506.3093718182139	39.546	1.0298	39.553	39.041	40.071	0.0065002					44	26	2	0	0	0	0.7932	1	2430	2430		19.36	0	1	125680			36828	7241	24442	24452	41877	41877					0.10102689941663812
MLKLEVATLKH	11	Unmodified	_MLKLEVATLKH_					0	0	0		ENSG00000180777|ENST00000690538|ANKRD30B;nc|ENSG00000180777|Q9BXX2|ANKRD30B	ENSG00000180777|ENST00000690538|ANKRD30B	ENSG00000180777|ENST00000690538|ANKRD30B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8855590820312	2	641.881216	1281.74788	-0.046993	-3.0164E-05	2.048	0.0013146	2.001	0.0012844	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.6493	1	10025	10025		38.754	3.5754	1	2217900			36829	7347	24443	24453	41878	41878					0.1182743817332721
MLKNEIDRRDR	11	Unmodified	_MLKNEIDRRDR_					0	0	0			REV__ENSG00000170949|ENST00000683776|ZNF160	REV__ENSG00000170949|ENST00000683776|ZNF160	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.7370300292969	3	482.592903	1444.75688	-0.2283	-0.00011017	-1.8452	-0.00089047	-2.0735	-0.0010006	482.59184825076414	30.839	0.67731	30.792	30.538	31.215	-0.047062					18	17	2	0	0	0	0.17504	1	1699	1699		19.627	2.4602	1	18729	+		36830	21703	24444	24454	41879	41879					0.05229179791717797
MLKRALPK	8	Unmodified	_MLKRALPK_					0	0	0			REV__ENST00000488896.1_1_2:120689943-120692535:+|nuORF	REV__ENST00000488896.1_1_2:120689943-120692535:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8031921386719	2	478.807322	955.600092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.196	1	42.196	41.696	42.696	0								0	0	0	0.29498	1	2907	2907		26.796	0	1		+		36831	16938	24445	24455	41880	41880					0.12051591430008557
MLKRALPK	8	Unmodified	_MLKRALPK_					0	0	0			REV__ENST00000488896.1_1_2:120689943-120692535:+|nuORF	REV__ENST00000488896.1_1_2:120689943-120692535:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.805419921875	2	478.807322	955.600092	0.18646	8.928E-05	-3.0807	-0.001475	-2.8942	-0.0013858	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.87922	1	2704	2704		31.955	6.5047	1	371600	+		36832	16938	24445	24455	41881	41881					0.12051591430008557
MLKRALPK	8	Unmodified	_MLKRALPK_					0	0	0			REV__ENST00000488896.1_1_2:120689943-120692535:+|nuORF	REV__ENST00000488896.1_1_2:120689943-120692535:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8062744140625	2	478.807322	955.600092	-2.669	-0.0012779	-0.055798	-2.6716E-05	-2.7248	-0.0013047	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.80706	1	2847	2847		19.36	4.6959	1	370420	+		36833	16938	24445	24455	41882	41882					0.12051591430008557
MLKRALPK	8	Unmodified	_MLKRALPK_					0	0	0			REV__ENST00000488896.1_1_2:120689943-120692535:+|nuORF	REV__ENST00000488896.1_1_2:120689943-120692535:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.80511474609375	2	478.807322	955.600092	-2.2897	-0.0010963	-1.2612	-0.00060387	-3.5509	-0.0017002	478.80658371263473	41.743	1.2165	41.746	40.986	42.202	0.0034142					57	30	2	0	0	0	0.86288	1	3073	3073		26.796	0	1	281640	+		36834	16938	24445	24455	41883	41883					0.12051591430008557
MLKSHIKKIPN	11	Unmodified	_MLKSHIKKIPN_					0	0	0		ENST00000242810.10_1_3:183361295-183368126:+|nuORF	ENST00000242810.10_1_3:183361295-183368126:+|nuORF	ENST00000242810.10_1_3:183361295-183368126:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.9338684082031	3	436.932197	1307.77476	0.498	0.00021759	3.5519	0.001552	4.0499	0.0017695	436.93369927878706	20.732	2.5953	20.273	19.595	22.19	-0.4591					152	59	4	0	0	0	0.74405	1	672	672		23.378	1.5975	1	492360			36835	9256	24446	24456	41884	41884					0.1331854678455784
MLKSIVIGN	9	Unmodified	_MLKSIVIGN_					0	0	0		ENST00000476269.1_1_1:35559676-35561465:+|nuORF	ENST00000476269.1_1_1:35559676-35561465:+|nuORF	ENST00000476269.1_1_1:35559676-35561465:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79052734375	2	487.788795	973.563038	0.54993	0.00026825	3.015	0.0014707	3.565	0.001739	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.7932	1	8369	8369		26.693	0	1	633420			36836	12334	24447	24457	41885	41885					0.0751987509358969
MLKVVLAPCIE	11	Unmodified	_MLKVVLAPCIE_					0	0	0		ENST00000552741.5_1_12:82868290-82872800:+|nuORF;ENST00000551645.1_1_12:82870329-82872800:+|nuORF;ENST00000548432.5_1_12:82832322-82872800:+|nuORF;ENSG00000127720|ENST00000248306|METTL25	ENST00000552741.5_1_12:82868290-82872800:+|nuORF	ENST00000552741.5_1_12:82868290-82872800:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.8977966308594	3	405.899506	1214.67669	0.76153	0.0003091	0.57095	0.00023175	1.3325	0.00054085	405.8995817616013	21.583	0.4957	21.647	21.502	21.998	0.064747					25	15	2	0	0	0	0.74022	1	613	613		24.232	4.2013	1	19656			36837	3513	24448	24458	41886	41886					0.07793602144306533
MLLAWVQAFL	10	Unmodified	_MLLAWVQAFL_					0	0	0		nc|ENSG00000100100|Q96FE7-2|PIK3IP1;nc|ENSG00000100100|Q96FE7-4|PIK3IP1;nc|ENSG00000100100|Q96FE7-5|PIK3IP1;ENSG00000100100|ENST00000215912|PIK3IP1	nc|ENSG00000100100|Q96FE7-2|PIK3IP1	nc|ENSG00000100100|Q96FE7-2|PIK3IP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.33251953125	2	596.33337	1190.65219	-0.30561	-0.00018224	-0.47633	-0.00028405	-0.78194	-0.00046629	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.86305	1	9568	9568		31.955	0	1	740920			36838	14806	24449	24459	41887	41887					0.0644871005308687
MLLFHALRP	9	Unmodified	_MLLFHALRP_					0	0	0			REV__ENSG00000182050|ENST00000611864|MGAT4C	REV__ENSG00000182050|ENST00000611864|MGAT4C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.3198852539062	2	549.318054	1096.62156	2.1645	0.001189	-2.1053	-0.0011565	0.059228	3.2535E-05	549.3166986536975	100.73	0.85296	101.07	100.61	101.46	0.34591					55	20	3	0	0	0	0.5393	1	12238	12238		50.025	7.1603	1	477000	+		36839	22495	24450	24460	41888	41888					0.07710976458702135
MLLFHALRP	9	Unmodified	_MLLFHALRP_					0	0	0			REV__ENSG00000182050|ENST00000611864|MGAT4C	REV__ENSG00000182050|ENST00000611864|MGAT4C	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	549.318054	1096.62156	0.88935	0.00048854	-1.1977	-0.00065793	-0.30838	-0.0001694	549.3172828747412	100.61	0.88557	100.91	100.53	101.41	0.2999	-0.1286	0.00022248	NaN	50.025	58	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	409320	+		36840	22495	24450	24460							0.07710976458702135
MLLGFLVF	8	Unmodified	_MLLGFLVF_					0	0	0		ENST00000377126.3_1_9:73002336-73002447:-|nuORF	ENST00000377126.3_1_9:73002336-73002447:-|nuORF	ENST00000377126.3_1_9:73002336-73002447:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.2717590332031	2	470.27225	938.529947	-0.95275	-0.00044805	0.57854	0.00027207	-0.37421	-0.00017598	470.2725133090264	92.093	2.8487	92.314	91.222	94.07	0.22157					155	67	4	0	0	0	0.84567	1	9356	9356		24.504	1.4615	1	1872200			36841	10829	24451	24461	41889	41889					0.05822293041535431
MLLGNLIAT	9	Unmodified	_MLLGNLIAT_					0	0	0		ENST00000338154.10_1_X:53964145-53964379:-|nuORF	ENST00000338154.10_1_X:53964145-53964379:-|nuORF	ENST00000338154.10_1_X:53964145-53964379:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.767822265625	2	473.275521	944.536489	0.59258	0.00028045	3.4698	0.0016422	4.0624	0.0019226	473.27714884236195	80.193	1.2351	80.334	80.088	81.323	0.14118					58	38	2	0	0	0	0.20789	1	7749	7749		6.7355	0	1	74440			36842	10197	24452	24462	41890	41890					0.06200186202261193
MLLGPKLQ	8	Unmodified	_MLLGPKLQ_					0	0	0			REV__ENST00000561704.1_1_16:66914465-66918177:+|nuORF	REV__ENST00000561704.1_1_16:66914465-66918177:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27423095703125	2	450.272781	898.531009	0.59862	0.00026954	4.0898	0.0018415	4.6884	0.0021111	450.27444477796837	83.377	0.92702	83.311	82.97	83.897	-0.066185					42	21	3	0	0	0	0.87276	1	8504	8504		29.842	1.5873	1	255680	+		36843	28785	24453	24463	41891	41891					0.07768507410446546
MLLGTSLTLL	10	Unmodified	_MLLGTSLTLL_					0	0	0		ENST00000569929.5_1_16:81888133-81917132:+|nuORF	ENST00000569929.5_1_16:81888133-81917132:+|nuORF	ENST00000569929.5_1_16:81888133-81917132:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3179931640625	2	531.317386	1060.62022	1.7702	0.00094052	1.4799	0.00078629	3.25	0.0017268	531.3180188955155	94.734	1.4927	95.166	94.713	96.206	0.4324					93	35	4	0	0	0	0.85939	1	11354	11354		23.042	0	1	2051100			36844	13988	24454	24464	41892	41892					0.09233297579316968
MLLHKFTK	8	Unmodified	_MLLHKFTK_					0	0	0			REV__ENSG00000181072|ENST00000680005|CHRM2	REV__ENSG00000181072|ENST00000680005|CHRM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.24053955078125	2	509.29933	1016.58411	-0.74184	-0.00037782	4.118	0.0020973	3.3762	0.0017195	509.8032357351913	38.995	0.80626	39.337	39.065	39.872	0.34187					21	18	2	0	0	0	0.4196	1	3273	3273		11.511	0	1	161580	+		36845	22439	24455	24465	41893	41893					0.07647885193114234
MLLIPCVSSH	10	Unmodified	_MLLIPCVSSH_					0	0	0		ENST00000501520.1_1_16:28298001-28298106:-|nuORF	ENST00000501520.1_1_16:28298001-28298106:-|nuORF	ENST00000501520.1_1_16:28298001-28298106:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.2874755859375	2	550.285563	1098.55657	0.39665	0.00021827	2.9904	0.0016455	3.387	0.0018638	550.2870812764359	90.364	0.93704	90.815	90.528	91.465	0.45058					59	22	4	0	0	0	0.344	1	10723	10723		68.787	5.253	1	2468700			36846	12844	24456	24466	41894	41894					0.011236138705498888
MLLKLNAQV	9	Unmodified	_MLLKLNAQV_					0	0	0			REV__ENST00000497446.5_1_7:107332392-107334073:+|nuORF	REV__ENST00000497446.5_1_7:107332392-107334073:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3096313476562	2	515.309895	1028.60524	-0.55946	-0.0002883	0.60137	0.00030989	0.041903	2.1593E-05	515.3100019000319	59.336	1.1389	59.727	59.399	60.538	0.39077					69	28	3	0	0	0	0.64922	1	6300	6300		44.117	1.6423	1	1213100	+		36847	27356	24457	24467	41895	41895					0.09207850501957182
MLLKLNAQV	9	Unmodified	_MLLKLNAQV_					0	0	0			REV__ENST00000497446.5_1_7:107332392-107334073:+|nuORF	REV__ENST00000497446.5_1_7:107332392-107334073:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3128051757812	2	515.309895	1028.60524	-0.31026	-0.00015988	0.17651	9.0958E-05	-0.13375	-6.8924E-05	515.309789573958	59.477	1.1647	60.03	59.456	60.621	0.55323					75	29	3	0	0	0	0.62081	1	6204	6204		45.952	0	1	1098000	+		36848	27356	24457	24467	41896	41896					0.09207850501957182
MLLKREVSD	9	Unmodified	_MLLKREVSD_					0	0	0			REV__ENSG00000077348|ENST00000221233|EXOSC5	REV__ENSG00000077348|ENST00000221233|EXOSC5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.31689453125	2	545.799891	1089.58523	-1.4659	-0.00080008	-1.9641	-0.001072	-3.43	-0.0018721	545.7989080419603	90.146	0.59457	90.322	89.999	90.594	0.1758					18	13	2	0	0	0	0.20789	1	8973	8973		20.947	0	1	109930	+		36849	16746	24458	24468	41897	41897					0.044020547713671476
MLLKTILCSRI	11	Unmodified	_MLLKTILCSRI_					0	0	0		ENST00000397463.2_1_2:133403122-133403170:-|nuORF	ENST00000397463.2_1_2:133403122-133403170:-|nuORF	ENST00000397463.2_1_2:133403122-133403170:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	645.8841552734375	2	645.885444	1289.75633	0.94466	0.00061014	-3.8876	-0.0025109	-2.9429	-0.0019008	645.8828437678978	105.63	1.0903	105.74	105.07	106.16	0.10765					79	27	3	0	0	0	0.57736	2	11276	11252;11276		46.457	8.6453	1	2734800			36850	11149	24459	24469	41898;41899	41899					0.12304668818319442
MLLLPIYF	8	Unmodified	_MLLLPIYF_					0	0	0			REV__ENSG00000178394|ENST00000323865|HTR1A	REV__ENSG00000178394|ENST00000323865|HTR1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	505.2917785644531	2	505.293182	1008.57181	-0.768	-0.00038806	-2.3436	-0.0011842	-3.1116	-0.0015723	505.2918931057953	97.609	1.9763	97.609	97.162	99.138	0					93	47	3	0	0	0	0.88393	1	9798	9798		33.493	0	1	573460	+		36851	22275	24460	24470	41900	41900					0.06786848730052952
MLLLRVGT	8	Unmodified	_MLLLRVGT_					0	0	0		ENST00000281543.5_1_4:44680449-44680617:+|nuORF	ENST00000281543.5_1_4:44680449-44680617:+|nuORF	ENST00000281543.5_1_4:44680449-44680617:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7801208496094	2	451.778231	901.541908	0.99248	0.00044838	3.0988	0.0014	4.0913	0.0018484	451.77963856381217	86.78	1.6717	86.706	86.227	87.899	-0.074005					91	38	4	0	0	0	0.88915	1	8942	8942		35.201	1.6851	1	335390			36852	9627	24461	24471	41901	41901					0.08719909784736046
MLLPKPKAKIA	11	Unmodified	_MLLPKPKAKIA_					0	0	0			REV__ENSG00000276231|ENST00000619866|PIK3R6	REV__ENSG00000276231|ENST00000619866|PIK3R6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.8865966796875	2	605.391219	1208.76789	0.26185	0.00015852	-2.5775	-0.0015604	-2.3157	-0.0014019	605.389725051937	44.911	0.88356	44.843	44.352	45.235	-0.06863					42	20	3	0	0	0	0.70584	1	3175	3175		27.882	1.1893	1	391520	+		36853	24017	24462	24472	41902	41902					0.17185233903956032
MLLPLLQTPRA	11	Unmodified	_MLLPLLQTPRA_					0	0	0		ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	ENSG00000188897|ENST00000696174|unknown	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.8795166015625	2	626.875933	1251.73731	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.177	1	58.287	57.787	58.787	0.11027								0	0	0	0.56276	1	4951	4951		39.253	6.4404	1				36854	7970	24463	24473	41903	41903					0.12151455518892362
MLLQRGVDV	9	Unmodified	_MLLQRGVDV_					0	0	0		ENSG00000166183|ENST00000551177|ASPG;nc|ENSG00000166183|Q86U10-3|ASPG	ENSG00000166183|ENST00000551177|ASPG	ENSG00000166183|ENST00000551177|ASPG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.7999267578125	2	515.789327	1029.5641	-0.30322	-0.0001564	-0.94213	-0.00048594	-1.2453	-0.00064234	516.2903823983324	54.405	0.54543	54.989	54.749	55.295	0.58474					16	12	2	0	0	0	0.20789	1	5584	5584		63.306	0	1	199160			36855	6167	24464	24474	41904	41904					0.050500894624974535
MLLRLISA	8	Unmodified	_MLLRLISA_					0	0	0			REV__ENST00000283131.3_1_4:144460011-144460041:+|nuORF	REV__ENST00000283131.3_1_4:144460011-144460041:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7875061035156	2	458.786056	915.557558	-1.1208	-0.00051419	4.2526	0.001951	3.1318	0.0014368	458.7879776925229	92.908	3.5156	93.134	92.238	95.754	0.22548					221	84	5	0	0	0	0.91005	1	9390	9390		42.474	5.446	1	15931000	+		36856	24617	24465	24475	41905	41905					0.09640196301779724
MLLRTRNRHS	10	Unmodified	_MLLRTRNRHS_					0	0	0		ENST00000398958.6_1_1:28832464-28856398:+|nuORF	ENST00000398958.6_1_1:28832464-28856398:+|nuORF	ENST00000398958.6_1_1:28832464-28856398:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.86083984375	2	642.359305	1282.70406	2.6974	0.0017327	1.5259	0.0009802	4.2233	0.0027129	642.359695370679	114.18	2.3126	114.16	113.46	115.77	-0.024452					163	86	2	0	0	0	0.86272	1	12583	12583		24.519	0	1	464940			36857	11195	24466	24476	41906	41906					0.07401266519559613
MLLRTRNRHS	10	Unmodified	_MLLRTRNRHS_					0	0	0		ENST00000398958.6_1_1:28832464-28856398:+|nuORF	ENST00000398958.6_1_1:28832464-28856398:+|nuORF	ENST00000398958.6_1_1:28832464-28856398:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3623657226562	2	642.359305	1282.70406	7.1589	0.0045986	-2.5163	-0.0016164	4.6426	0.0029822	642.3583965461547	111.81	0.66489	111.84	111.7	112.36	0.032707					85	24	5	0	0	0	0.8608	1	13556	13556		34.173	1.3601	1	7954900			36858	11195	24466	24476	41907	41907					0.07401266519559613
MLLSVLLMV	9	Unmodified	_MLLSVLLMV_					0	0	0		ENSG00000125895|ENST00000429036|TMEM74B	ENSG00000125895|ENST00000429036|TMEM74B	ENSG00000125895|ENST00000429036|TMEM74B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80462646484375	2	509.805599	1017.59665	-0.71562	-0.00036483	-2.281	-0.0011628	-2.9966	-0.0015277	509.8042530749235	99.723	0.85551	99.723	99.348	100.2	0					47	20	3	0	0	0	0.77546	1	10143	10143		31.955	3.7006	1	277710			36859	3425	24467	24477	41908	41908					0.08855160541145324
MLLVNPLPLSP	11	Unmodified	_MLLVNPLPLSP_					0	0	0			REV__ENSG00000205085|ENST00000682356|GARIN1A	REV__ENSG00000205085|ENST00000682356|GARIN1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8558959960938	2	597.35176	1192.68897	2.4166	0.0014436	3.706	0.0022138	6.1226	0.0036574	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.65746	1	9948	9948		37.812	8.6415	1	8047600	+		36860	23538	24468	24478	41909	41909					0.10032961879005597
MLMIAVID	8	Unmodified	_MLMIAVID_					0	0	0			REV__ENST00000478283.5_1_1:29069140-29069263:+|nuORF	REV__ENST00000478283.5_1_1:29069140-29069263:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.2475280761719	2	453.245375	904.476197	0.49279	0.00022335	3.6084	0.0016355	4.1012	0.0018588	453.24688966257435	31.07	0.7603	31.059	30.668	31.428	-0.010656					29	18	2	0	0	0	0.86791	1	1676	1676		28.254	0.37203	1	71636	+		36861	27378	24469	24479	41910	41910					0.02013752547520653
MLMKRALKFK	10	Unmodified	_MLMKRALKFK_					0	0	0		nc|ENSG00000075945|Q92845-4|KIFAP3;nc|ENSG00000075945|Q92845-2|KIFAP3;nc|ENSG00000075945|Q92845-3|KIFAP3;ENSG00000075945|ENST00000361580|KIFAP3	nc|ENSG00000075945|Q92845-4|KIFAP3	nc|ENSG00000075945|Q92845-4|KIFAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.928466796875	3	422.591006	1264.75119	0.3184	0.00013455	4.3342	0.0018316	4.6526	0.0019662	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.88463	1	4554	4554		11.636	0.53916	1	1249100			36862	1348	24470	24480	41911	41911					0.1294040974632935
MLMLCVYM	8	Oxidation (M)	_MLMLCVYM(Oxidation (M))_		MLMLCVYM(1)		M(-42)LM(-39)LCVYM(39)	0	0	1		ENSG00000165164|ENST00000378653|CFAP47	ENSG00000165164|ENST00000378653|CFAP47	ENSG00000165164|ENST00000378653|CFAP47	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2230529785156	2	510.22527	1018.43599	-0.58544	-0.00029871	-3.9344	-0.0020074	-4.5198	-0.0023061	510.22321540791023	88.543	1.4016	89.014	88.32	89.721	0.47068					100	34	5	0	0	0	0.91333	1	10477	10477		43.626	8.0078	3	3237400			36863	6053	24471	24481	41912	41912		105			-0.07249253438908454
MLMLGAAAAG	10	Unmodified	_MLMLGAAAAG_					0	0	0		ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	454.2274169921875	2	453.232799	904.451044	-1.5363	-0.0006963	-0.33158	-0.00015028	-1.8679	-0.00084658	453.2326238297685	81.795	2.1485	81.909	80.507	82.656	0.11425					84	51	2	0	0	0	0.37624	1	7621	7621		19.36	6.4008	1	52505			36864	3222	24472	24482	41913	41913					-0.005003022550681635
MLMLGAAAAG	10	Unmodified	_MLMLGAAAAG_					0	0	0		ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	453.232799	904.451044	-1.2714	-0.00057625	-0.53767	-0.00024369	-1.8091	-0.00081994	453.2325751728149	81.531	1.7012	81.531	81.189	82.89	0	-0.11106	0.00067335	NaN	19.36	71	48	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61857			36865	3222	24472	24482							-0.005003022550681635
MLMLGAAAAG	10	Unmodified	_MLMLGAAAAG_					0	0	0		ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	453.232799	904.451044	-0.13771	-6.2413E-05	-1.8376	-0.00083288	-1.9753	-0.00089529	453.2318994230632	81.409	2.5073	81.473	80.403	82.91	0.064384	-0.16901	-0.00050503	NaN	19.36	80	59	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56350			36866	3222	24472	24482							-0.005003022550681635
MLMLGAAAAG	10	Unmodified	_MLMLGAAAAG_					0	0	0		ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	453.232799	904.451044	0.64614	0.00029285	-0.048787	-2.2112E-05	0.59735	0.00027074	453.2315248351573	81.816	2.1562	81.874	81.34	83.496	0.057808	0.2322	0.0011165	NaN	19.36	84	49	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57746			36867	3222	24472	24482							-0.005003022550681635
MLMLGAAAAG	10	Unmodified	_MLMLGAAAAG_					0	0	0		ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	453.232799	904.451044	-1.2243	-0.00055489	0.81461	0.00036921	-0.40968	-0.00018568	453.2323943240669	81.507	2.2576	81.652	80.367	82.624	0.14513	0.010046	0.0018991	NaN	19.36	88	54	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113100			36868	3222	24472	24482							-0.005003022550681635
MLMLGAAAAG	10	Unmodified	_MLMLGAAAAG_					0	0	0		ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	ENSG00000122386|ENST00000219091|ZNF205	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	453.232799	904.451044	0.58115	0.00026339	-2.8595	-0.001296	-2.2783	-0.0010326	453.2315657925083	81.269	2.0426	81.413	80.459	82.501	0.14352	-0.22926	-0.0014313	NaN	19.36	73	48	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66099			36869	3222	24472	24482							-0.005003022550681635
MLNLILLDPSD	11	Unmodified	_MLNLILLDPSD_					0	0	0		ENSG00000261150|ENST00000615648|EPPK1	ENSG00000261150|ENST00000615648|EPPK1	ENSG00000261150|ENST00000615648|EPPK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3364868164062	2	622.333764	1242.65297	-0.073789	-4.5921E-05	4.34	0.0027009	4.2662	0.002655	622.3363752507829	111.19	1.2568	111.19	110.57	111.83	0					110	41	4	0	0	0	0.7342	1	11591	11591		25.574	1.0549	1	190840			36870	8922	24473	24483	41914	41914					0.04135459911503858
MLNLILLDPSD	11	Unmodified	_MLNLILLDPSD_					0	0	0		ENSG00000261150|ENST00000615648|EPPK1	ENSG00000261150|ENST00000615648|EPPK1	ENSG00000261150|ENST00000615648|EPPK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3353881835938	2	622.333764	1242.65297	2.9643	0.0018448	1.26	0.00078415	4.2243	0.0026289	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.7342	1	12258	12258		25.574	0	1	435720			36871	8922	24473	24483	41915	41915					0.04135459911503858
MLNQRKWKKRK	11	Unmodified	_MLNQRKWKKRK_					0	0	0		ENSG00000149043|ENST00000341958|SYT8;ENST00000424556.2_1_11:1856509-1858658:+|nuORF	ENSG00000149043|ENST00000341958|SYT8	ENSG00000149043|ENST00000341958|SYT8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3096008300781	3	505.973278	1514.89801	2.9404	0.0014878	-0.85935	-0.00043481	2.081	0.0010529	505.97287794220534	112.87	7.7849	112.84	112.19	119.97	-0.024811					550	277	2	0	0	0	0.84494	1	12475	12475		6.3209	0.31984	1	2261500			36872	4992	24474	24484	41916	41916					0.16115222955613717
MLPGQPLAR	9	Unmodified	_MLPGQPLAR_					0	0	0		ENST00000232375.7_1_3:48556573-48556744:-|nuORF	ENST00000232375.7_1_3:48556573-48556744:-|nuORF	ENST00000232375.7_1_3:48556573-48556744:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79705810546875	2	491.778762	981.542971	-0.72005	-0.00035411	-3.1073	-0.0015281	-3.8273	-0.0018822	491.7770685510801	62.043	0.11051	62.059	62.01	62.121	0.015724					5	3	2	0	0	0	0.20789	1	5405	5405		10.866	0	1	49398			36873	9215	24475	24485	41917	41917					0.05146124153634446
MLPKIIPNLKE	11	Unmodified	_MLPKIIPNLKE_					0	0	0			REV__ENSG00000095564|ENST00000265990|BTAF1	REV__ENSG00000095564|ENST00000265990|BTAF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.5975646972656	3	432.596703	1294.76828	-0.96196	-0.00041614	3.0483	0.0013187	2.0864	0.00090256	432.5979589237285	106.62	0.93322	106.62	106.18	107.11	0					73	20	5	0	0	0	0.73893	1	11042	11042		34.087	14.824	1	2667500	+		36874	17061	24476	24486	41918	41918					0.13268608833141116
MLPKIIPNLKE	11	Unmodified	_MLPKIIPNLKE_					0	0	0			REV__ENSG00000095564|ENST00000265990|BTAF1	REV__ENSG00000095564|ENST00000265990|BTAF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5977783203125	3	432.596703	1294.76828	-1.5719	-0.00068002	3.863	0.0016711	2.2911	0.00099111	432.5984109358272	105.99	1.0468	106.14	105.65	106.69	0.14843					117	25	6	0	0	0	0.75921	1	11390	11390		23.378	6.2112	1	44749000	+		36875	17061	24476	24486	41919	41919					0.13268608833141116
MLPLKMKVD	9	Unmodified	_MLPLKMKVD_					0	0	0		ENST00000395407.6_1_15:69591322-69629759:+|nuORF	ENST00000395407.6_1_15:69591322-69629759:+|nuORF	ENST00000395407.6_1_15:69591322-69629759:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.8070678710938	2	537.806131	1073.59771	-0.39494	-0.0002124	0.65078	0.00035	0.25584	0.00013759	537.8062862027798	58.393	0.83032	58.946	58.512	59.343	0.55323					33	19	2	0	0	0	0.55097	1	6134	6134		49.442	5.0644	1	642540			36876	11092	24477	24487	41920	41920					0.06385374910041719
MLPLNCVC	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MLPLNCVC_					1	0	0		ENST00000461762.5_1_9:132591268-132595829:-|nuORF	ENST00000461762.5_1_9:132591268-132595829:-|nuORF	ENST00000461762.5_1_9:132591268-132595829:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7153015136719	2	467.713385	933.412216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.011	1	89.462	88.962	89.962	0.45058								0	0	0	0.30609	1	10499	10499		44.531	11.719	1				36877	12031	24478	24488	41921	41921					-0.057153508810870335
MLPPHQLFWKW	11	Unmodified	_MLPPHQLFWKW_					0	0	0			REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.313232421875	3	494.928676	1481.7642	0.98763	0.00048881	-2.9736	-0.0014717	-1.986	-0.00098292	495.2613943535464	34.367	0.16349	34.672	34.571	34.735	0.30494					5	3	2	0	0	0	0.17754	1	2566	2566		15.333	0	1	117940	+		36878	21769	24479	24489	41922	41922					0.0425856413010024
MLPTRQVN	8	Unmodified	_MLPTRQVN_					0	0	0			REV__ENSG00000256870|ENST00000536262|SLC5A8	REV__ENSG00000256870|ENST00000536262|SLC5A8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.75933837890625	2	479.760569	957.506586	-0.7953	-0.00038155	-3.1946	-0.0015327	-3.9899	-0.0019142	479.75889137645663	46.655	0.71327	46.626	46.312	47.025	-0.028782					25	16	2	0	0	0	0.91977	1	3862	3862		45.952	1.8352	1	190400	+		36879	23912	24480	24490	41923	41923					0.026132472569202037
MLPVKWMP	8	Unmodified	_MLPVKWMP_					0	0	0		ENSG00000171094|ENST00000389048|ALK	ENSG00000171094|ENST00000389048|ALK	ENSG00000171094|ENST00000389048|ALK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2904968261719	2	501.269184	1000.52382	-0.25332	-0.00012698	1.6256	0.00081487	1.3723	0.00068789	501.770235887056	86.945	0.57687	87.391	86.895	87.472	0.44628					18	13	2	0	0	0	0.4196	1	10190	10190		19.36	0	1	160250			36880	6636	24481	24491	41924	41924					0.023574515383643302
MLQEKLKELE	10	Unmodified	_MLQEKLKELE_					0	0	0		ENSG00000115993|ENST00000332624|TRAK2;nc|ENSG00000115993|O60296-2|TRAK2;ENST00000486291.1_1_2:202262855-202264204:-|nuORF	ENSG00000115993|ENST00000332624|TRAK2	ENSG00000115993|ENST00000332624|TRAK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	630.8496704101562	2	630.847039	1259.67952	2.85	0.0017979	1.449	0.00091407	4.2989	0.002712	630.8477214787887	110.77	1.3958	110.74	110.48	111.87	-0.026314					127	46	4	0	0	0	0.86718	1	12315	12315		27.882	1.1893	1	751460			36881	2890	24482	24492	41925	41925					0.060071488028142994
MLQELPPIVDK	11	Unmodified	_MLQELPPIVDK_					0	0	0			REV__ENST00000552641.5_1_2:143913059-144194625:+|nuORF	REV__ENST00000552641.5_1_2:143913059-144194625:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.856201171875	2	641.857406	1281.70026	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.87	1	119.9	119.4	120.4	0.026466								0	0	0	0.56276	1	13188	13188		33.922	4.7516	1		+		36882	16719	24483	24493	41926	41926					0.07067739182480182
MLQELPPIVDK	11	Unmodified	_MLQELPPIVDK_					0	0	0			REV__ENST00000552641.5_1_2:143913059-144194625:+|nuORF	REV__ENST00000552641.5_1_2:143913059-144194625:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8597412109375	2	641.857406	1281.70026	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.66	1	116.64	116.14	117.14	-0.014999								0	0	0	0.56276	1	13988	13988		29.17	0	1		+		36883	16719	24483	24493	41927	41927					0.07067739182480182
MLQKPKSV	8	Unmodified	_MLQKPKSV_					0	0	0		nc|ENSG00000169598|O76075-4|DFFB;nc|ENSG00000169598|O76075-3|DFFB;nc|ENSG00000169598|O76075-2|DFFB;ENSG00000169598|ENST00000378209|DFFB	nc|ENSG00000169598|O76075-4|DFFB	nc|ENSG00000169598|O76075-4|DFFB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7765197753906	2	465.775688	929.536823	0.5788	0.00026959	3.5248	0.0016418	4.1036	0.0019114	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.90983	1	7492	7492		42.396	8.2236	1	344270			36884	6509	24484	24494	41928	41928					0.06923605922111165
MLQRNKCYVHQ	11	Unmodified	_MLQRNKCYVHQ_					0	0	0		L1ME3_dup5470|chr10:45638510-45639488:+|1.2050220498951432|0.3685433200758222|1.71|63.0|2|1|sense	L1ME3_dup5470|chr10:45638510-45639488:+|1.2050220498951432|0.3685433200758222|1.71|63.0|2|1|sense	L1ME3_dup5470|chr10:45638510-45639488:+|1.2050220498951432|0.3685433200758222|1.71|63.0|2|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2567138671875	3	473.904313	1418.69111	0.91752	0.00043482	0.39798	0.0001886	1.3155	0.00062342	474.23927316157506	22.413	0.22971	21.994	21.833	22.062	-0.41879					6	4	2	0	0	0	0.17911	1	907	907		24.232	0.85391	1	38882			36885	14600	24485	24495	41929	41929					-0.0014893265483806317
MLQRRLAE	8	Unmodified	_MLQRRLAE_					0	0	0			REV__ENSG00000142920|ENST00000294517|AZIN2	REV__ENSG00000142920|ENST00000294517|AZIN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7694396972656	2	508.787118	1015.55968	1.2291	0.00062533	-1.0149	-0.00051639	0.21411	0.00010894	508.7865358241792	49.285	1.0146	50.189	49.686	50.7	0.90424					37	24	2	0	0	0	0.4196	1	4863	4863		55.504	0	1	553800	+		36886	19761	24486	24496	41930	41930					0.05252625039577197
MLRAKGGT	8	Unmodified	_MLRAKGGT_					0	0	0			REV__ENST00000402023.1_1_6:74328227-74328317:+|nuORF	REV__ENST00000402023.1_1_6:74328227-74328317:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2398376464844	2	417.23673	832.458907	3.0856	0.0012874	3.1331	0.0013073	6.2187	0.0025947	417.2376917787685	88.314	2.8848	88.365	87.296	90.181	0.050415					161	67	3	0	0	0	0.90465	1	9111	9111		40.573	5.3719	1	1607200	+		36887	26260	24487	24497	41931	41931					0.035975930567246905
MLRAVGIVLTE	11	Unmodified	_MLRAVGIVLTE_					0	0	0			REV__ENSG00000170927|ENST00000371117|PKHD1	REV__ENSG00000170927|ENST00000371117|PKHD1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	601.3483276367188	2	601.352291	1200.69003	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.567	1	57.672	57.172	58.172	0.1055								0	0	0	0.56276	1	4880	4880		36.447	3.6962	1		+		36888	21700	24488	24498	41932	41932					0.09771176247886615
MLRERARMA	9	Unmodified	_MLRERARMA_					0	0	0		ENST00000302174.8_1_4:88356371-88363063:+|nuORF	ENST00000302174.8_1_4:88356371-88363063:+|nuORF	ENST00000302174.8_1_4:88356371-88363063:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297729492188	2	567.305152	1132.59575	-0.50405	-0.00028595	1.6526	0.00093754	1.1486	0.00065159	567.8092105375844	93.508	0.59602	93.508	93.113	93.709	0					16	13	3	0	0	0	0.20789	1	9240	9240		14.865	3.9993	1	63851			36889	9815	24489	24499	41933	41933					0.034757589447963255
MLRFYMALV	9	Oxidation (M)	_MLRFYM(Oxidation (M))ALV_		MLRFYM(1)ALV		M(-54)LRFYM(54)ALV	0	0	1		ENST00000538878.5_1_Y:15522901-15560940:-|nuORF	ENST00000538878.5_1_Y:15522901-15560940:-|nuORF	ENST00000538878.5_1_Y:15522901-15560940:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.3018798828125	2	580.303755	1158.59296	-1.0225	-0.00059338	-3.0413	-0.0017649	-4.0638	-0.0023582	580.3018900215803	49.757	0.90461	50.205	49.694	50.599	0.44761					49	21	3	0	0	0	0.39977	1	4879	4879		57.811	8.3697	2	2020100			36890	13473	24490	24500	41934	41934		198			0.02000490767250085
MLRFYMALV	9	Oxidation (M)	_MLRFYM(Oxidation (M))ALV_		MLRFYM(1)ALV		M(-67)LRFYM(67)ALV	0	0	1		ENST00000538878.5_1_Y:15522901-15560940:-|nuORF	ENST00000538878.5_1_Y:15522901-15560940:-|nuORF	ENST00000538878.5_1_Y:15522901-15560940:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.3020629882812	2	580.303755	1158.59296	-0.047463	-2.7543E-05	-3.8786	-0.0022508	-3.9261	-0.0022783	580.3014620786945	49.57	0.81506	50.415	49.993	50.809	0.84501					45	19	3	0	0	0	0.17071	1	4883	4883		79.939	42.128	2	2193500			36891	13473	24490	24500	41935	41935		198			0.02000490767250085
MLRGPGIN	8	Unmodified	_MLRGPGIN_					0	0	0		nc|ENSG00000188877|Q6S8J7-2|POTEA;nc|ENSG00000188877|Q6S8J7|POTEA	nc|ENSG00000188877|Q6S8J7-2|POTEA	nc|ENSG00000188877|Q6S8J7-2|POTEA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.23565673828125	2	429.23673	856.458907	-0.96904	-0.00041595	-1.3817	-0.00059307	-2.3507	-0.001009	429.23600225893705	63.259	2.2189	63.282	62.72	64.938	0.022984					256	90	4	0	0	0	0.884	1	5563	5563		33.516	8.0654	1	5703300			36892	15172	24491	24501	41936	41936					0.024935930567153264
MLRGQVPLV	9	Unmodified	_MLRGQVPLV_					0	0	0		ENSG00000144712|ENST00000456430|CAND2;nc|ENSG00000144712|O75155-2|CAND2	ENSG00000144712|ENST00000456430|CAND2	ENSG00000144712|ENST00000456430|CAND2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3028869628906	2	506.802237	1011.58992	-0.53686	-0.00027208	-1.3643	-0.00069144	-1.9012	-0.00096352	506.801399322013	50.598	1.1371	50.575	49.767	50.904	-0.02343					49	30	2	0	0	0	0.20789	1	4394	4394		38.806	22.333	1	158650			36893	4727	24492	24502	41937	41937					0.08458983704758793
MLRHCLVM	8	Oxidation (M)	_MLRHCLVM(Oxidation (M))_		MLRHCLVM(1)		M(-66)LRHCLVM(66)	0	0	1			REV__ENST00000552852.1_1_12:76509499-76509865:+|nuORF	REV__ENST00000552852.1_1_12:76509499-76509865:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.75048828125	2	509.753375	1017.4922	-0.7254	-0.00036978	-4.1168	-0.0020986	-4.8422	-0.0024683	509.75104021431855	45.601	0.68941	45.596	45.23	45.92	-0.0041618					27	15	2	0	0	0	0.73619	1	3659	3659		65.897	16.456	2	312100	+		36894	28633	24493	24503	41938	41938		425			-0.01584864487233517
MLRLLRLALAF	11	Unmodified	_MLRLLRLALAF_					0	0	0		nc|ENSG00000169551|Q8WUE5-2|CT55;ENSG00000169551|ENST00000276241|CT55	nc|ENSG00000169551|Q8WUE5-2|CT55	nc|ENSG00000169551|Q8WUE5-2|CT55	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2393493652344	3	439.612687	1315.81623	-0.078005	-3.4292E-05	0.26678	0.00011728	0.18878	8.2988E-05	439.94649883275866	55.379	0.91513	55.78	55.364	56.279	0.40101					32	21	2	0	0	0	0.17811	1	5748	5748		6.3209	0	1	236100			36895	6503	24494	24504	41939	41939					0.17095727543846806
MLRLSYPLELQ	11	Unmodified	_MLRLSYPLELQ_					0	0	0		ENSG00000158473|ENST00000674085|CD1D	ENSG00000158473|ENST00000674085|CD1D	ENSG00000158473|ENST00000674085|CD1D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.717529296875	3	454.919846	1361.73771	-1.6273	-0.00074029	-3.5531	-0.0016164	-5.1804	-0.0023567	454.91800353745134	29.773	1.1377	29.801	29.401	30.538	0.028618					50	25	4	0	0	0	0.17272	1	1863	1863		25.892	12.384	1	322910			36896	5480	24495	24505	41940	41940					0.07130830448113556
MLRPLSHR	8	Unmodified	_MLRPLSHR_					0	0	0		ENST00000565736.1_1_16:29814793-29815446:+|nuORF;nc|ENSG00000079616|Q14807-2|KIF22;ENSG00000079616|ENST00000160827|KIF22	ENST00000565736.1_1_16:29814793-29815446:+|nuORF	ENST00000565736.1_1_16:29814793-29815446:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	505.2913513183594	2	505.289828	1008.5651	-0.058143	-2.9379E-05	3.3858	0.0017108	3.3277	0.0016814	505.291445253125	97.476	2.5316	97.533	97.032	99.564	0.056831					136	58	3	0	0	0	0.89043	1	10260	10260		35.618	10.168	1	1323100			36897	1424	24496	24506	41941	41941					0.06116348622060741
MLRPSYRF	8	Unmodified	_MLRPSYRF_					0	0	0			REV__nc|ENSG00000186416|O15226-2|NKRF	REV__nc|ENSG00000186416|O15226-2|NKRF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	535.8145751953125	2	535.284211	1068.55387	0.82318	0.00044064	3.3884	0.0018138	4.2116	0.0022544	535.2860531377589	99.118	2.9353	99.275	97.968	100.9	0.15659					98	67	3	0	0	0	0.4196	1	10324	10324		16.473	0	1	215920	+		36898	30107	24497	24507	41942	41942					0.022335265279025407
MLRPTVTN	8	Unmodified	_MLRPTVTN_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2532653808594	2	466.25512	930.495686	-1.4677	-0.00068433	-1.5144	-0.00070609	-2.9821	-0.0013904	466.2543190866504	60.961	1.1333	60.992	59.95	61.083	0.0312					73	35	3	0	0	0	0.86677	1	5623	5623		27.882	1.0861	1	265390	+		36899	18069	24498	24508	41943	41943					0.027658448826286985
MLRRRFRRPAP	11	Unmodified	_MLRRRFRRPAP_					0	0	0		ENST00000587019.5_1_19:13869900-13872373:+|nuORF	ENST00000587019.5_1_19:13869900-13872373:+|nuORF	ENST00000587019.5_1_19:13869900-13872373:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.9578552246094	3	485.957851	1454.85172	0.24146	0.00011734	4.0236	0.0019553	4.265	0.0020726	486.29439869258147	15.685	0.22542	15.086	14.986	15.212	-0.59873					16	8	3	0	0	0	0.7896	1	37	37		13.508	1.5756	1	48778			36900	14184	24499	24509	41944	41944					0.14249202844234787
MLRTEPPGT	9	Unmodified	_MLRTEPPGT_					0	0	0		nc|ENSG00000174791|Q13671-2|RIN1;ENSG00000174791|ENST00000311320|RIN1;ENST00000526246.5_1_11:66103079-66103478:-|nuORF	nc|ENSG00000174791|Q13671-2|RIN1	nc|ENSG00000174791|Q13671-2|RIN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.29052734375	2	501.257859	1000.50117	-0.40587	-0.00020345	1.1878	0.0005954	0.78194	0.00039196	501.25937702727737	86.446	0.17085	86.502	86.439	86.61	0.055649					6	3	2	0	0	0	0.20789	1	8801	8801		26.693	0	1	47397			36901	6963	24500	24510	41945	41945					0.000935236744339818
MLSEVLLVSA	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MLSEVLLVSA_					1	0	0		ENSG00000110921|ENST00000228510|MVK	ENSG00000110921|ENST00000228510|MVK	ENSG00000110921|ENST00000228510|MVK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3058471679688	2	552.304475	1102.5944	0.78015	0.00043088	2.7293	0.0015074	3.5094	0.0019383	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.74274	1	9419	9419		42.396	10.762	1	1841700			36902	2552	24501	24511	41946	41946					0.047204033370235265
MLSPRRLAR	9	Unmodified	_MLSPRRLAR_					0	0	0			REV__ENST00000402687.8_1_8:70404996-70405236:+|nuORF	REV__ENST00000402687.8_1_8:70404996-70405236:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3278198242188	2	550.329485	1098.64442	0.24684	0.00013584	-4.4268	-0.0024362	-4.1799	-0.0023003	550.327086838159	99.973	1.2029	100.19	99.606	100.81	0.21511					73	27	4	0	0	0	0.51592	1	10450	10450		51.193	11.94	1	361560	+		36903	26263	24502	24512	41947	41947					0.09903995576178204
MLSRNVDNAE	10	Unmodified	_MLSRNVDNAE_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.7695922851562	2	574.771862	1147.52917	-0.78611	-0.00045184	-3.6119	-0.002076	-4.398	-0.0025278	574.7696176678855	59.825	1.2222	60.378	59.958	61.18	0.55323					89	32	4	0	0	0	0.4892	1	6385	6385		56.721	3.6321	1	4150300			36904	2096	24503	24513	41948	41948					-0.0386919813613531
MLSRPAQCWPN	11	Unmodified	_MLSRPAQCWPN_					0	0	0		ENST00000392876.7_1_12:104187029-104187729:-|nuORF	ENST00000392876.7_1_12:104187029-104187729:-|nuORF	ENST00000392876.7_1_12:104187029-104187729:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801513671875	3	434.874242	1301.6009	-0.7506	-0.00032642	0.38195	0.0001661	-0.36865	-0.00016031	435.20842862466884	35.502	0.39988	35.446	35.205	35.605	-0.055904					12	8	2	0	0	0	0.17302	1	2297	2297		26.75	0	1	56514			36905	11035	24504	24514	41949	41949					-0.03783981983247031
MLSTGRRNYD	10	Unmodified	_MLSTGRRNYD_					0	0	0			REV__nc|ENSG00000101972|Q8N3U4|STAG2	REV__nc|ENSG00000101972|Q8N3U4|STAG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.7921752929688	2	606.793129	1211.5717	0.36314	0.00022035	-0.53821	-0.00032658	-0.17507	-0.00010623	606.7926939641687	79.695	0.84825	80.111	79.742	80.59	0.41621					54	19	4	0	0	0	0.47091	1	9156	9156		58.23	1.7961	1	1157800	+		36906	29747	24505	24515	41950	41950					-0.025618030078931042
MLSWCPFY	8	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LSWC(Carbamidomethyl (C))PFY_	MLSWC(1)PFY	M(1)LSWCPFY	MLSWC(55)PFY	M(55)LSWCPFY	0	1	1		nc|ENSG00000112212|Q5TGU0-2|TSPO2;ENSG00000112212|ENST00000373161|TSPO2	nc|ENSG00000112212|Q5TGU0-2|TSPO2	nc|ENSG00000112212|Q5TGU0-2|TSPO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.2357788085938	2	560.235538	1118.45652	-0.16108	-9.0241E-05	-0.86589	-0.0004851	-1.027	-0.00057534	560.2348594821169	61.111	0.7449	61.664	61.511	62.256	0.55386					45	19	3	0	0	0	0.94132	1	6529	6529		54.765	10.234	1	387630			36907	2639	24506	24516	41951	41951	32				-0.09796623463239484
MLSWCPFY	8	Carbamidomethyl (C),Oxidation (M)	_M(Oxidation (M))LSWC(Carbamidomethyl (C))PFY_					0	1	1		nc|ENSG00000112212|Q5TGU0-2|TSPO2;ENSG00000112212|ENST00000373161|TSPO2	nc|ENSG00000112212|Q5TGU0-2|TSPO2	nc|ENSG00000112212|Q5TGU0-2|TSPO2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	560.235538	1118.45652	-0.24312	-0.0001362	-0.79255	-0.00044401	-1.0357	-0.00058022	560.2349842939108	61.236	0.85632	61.626	61.505	62.361	0.38945	-0.019248	3.7405E-05	NaN	54.765	34	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	327360			36908	2639	24506	24516			32				-0.09796623463239484
MLTILLRM	8	Unmodified	_MLTILLRM_					0	0	0			REV__ENST00000485101.5_1_3:186501406-186502392:+|nuORF	REV__ENST00000485101.5_1_3:186501406-186502392:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.7964782714844	2	495.795566	989.576579	1.3672	0.00067785	2.0859	0.0010342	3.4531	0.001712	495.79626399989235	105.14	1.0402	105.29	104.99	106.03	0.15583					65	26	4	0	0	0	0.93786	1	12832	12832		53.351	3.3269	1	604160	+		36909	26780	24507	24517	41952	41952					0.0813740960117002
MLTIRNKVKP	10	Unmodified	_MLTIRNKVKP_					0	0	0			REV__ENST00000477542.5_1_3:48415047-48423401:+|nuORF	REV__ENST00000477542.5_1_3:48415047-48423401:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5799560546875	3	400.581276	1198.722	2.0292	0.00081285	-4.2821	-0.0017153	-2.2529	-0.00090247	400.57946225825975	20.455	0.9392	19.996	19.641	20.58	-0.4591					46	21	3	0	0	0	0.86338	1	639	639		31.634	0.56612	1	275000	+		36910	21015	24508	24518	41953	41953					0.13058588721719389
MLTLASKLK	9	Unmodified	_MLTLASKLK_					0	0	0		nc|ENSG00000184182|Q969M7-5|UBE2F;nc|ENSG00000184182|Q969M7-4|UBE2F;nc|ENSG00000184182|Q969M7-3|UBE2F;nc|ENSG00000184182|Q969M7-6|UBE2F;ENSG00000184182|ENST00000272930|UBE2F;nc|ENSG00000184182|Q969M7-2|UBE2F	nc|ENSG00000184182|Q969M7-5|UBE2F	nc|ENSG00000184182|Q969M7-5|UBE2F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	502.8139343261719	2	502.81227	1003.60999	0.77487	0.00038961	2.0575	0.0010346	2.8324	0.0014242	502.8133310235605	97.118	3.7782	97.281	96.705	100.48	0.16317					264	87	5	0	0	0	0.78536	2	10075	10075;10136		29.15	1.0826	1	19692000			36911	7586	24509	24519	41954;41955	41954					0.10832734644736774
MLTLGFPLP	9	Unmodified	_MLTLGFPLP_					0	0	0		ENST00000483303.1_1_22:42912068-42915792:-|nuORF	ENST00000483303.1_1_22:42912068-42915792:-|nuORF	ENST00000483303.1_1_22:42912068-42915792:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7801818847656	2	494.780439	987.546325	-0.85772	-0.00042438	0.7525	0.00037232	-0.10522	-5.2061E-05	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.76996	1	8756	8756		33.516	6.7195	1	737700			36912	12508	24510	24520	41956	41956					0.052053742076282106
MLTLLVTQGT	10	Unmodified	_MLTLLVTQGT_					0	0	0			REV__nc|ENSG00000107186|O75970-5|MPDZ	REV__nc|ENSG00000107186|O75970-5|MPDZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.806396484375	2	538.804642	1075.59473	2.2674	0.0012217	1.5354	0.00082726	3.8027	0.0020489	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.64457	1	9416	9416		47.657	0	1	835060	+		36913	17649	24511	24521	41957	41957					0.0599582305687818
MLTNLLPAPS	10	Unmodified	_MLTNLLPAPS_					0	0	0			REV__ENST00000533676.5_1_11:61644904-61645258:-|nuORF	REV__ENST00000533676.5_1_11:61644904-61645258:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.7930908203125	2	528.791535	1055.56852	-0.70681	-0.00037376	4.0791	0.002157	3.3723	0.0017832	528.7935602407883	36.229	1.4862	36.239	35.797	37.283	0.0092773					80	32	4	0	0	0	0.6116	1	2358	2358		49.442	1.7842	1	1332400	+		36914	28354	24512	24522	41958	41958					0.04295553885390291
MLTNLLPAPS	10	Unmodified	_MLTNLLPAPS_					0	0	0			REV__ENST00000533676.5_1_11:61644904-61645258:-|nuORF	REV__ENST00000533676.5_1_11:61644904-61645258:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.7932739257812	2	528.791535	1055.56852	0.32349	0.00017106	3.3103	0.0017505	3.6338	0.0019215	528.7931534014222	36.129	0.71097	36.069	35.752	36.463	-0.060337					57	20	4	0	0	0	0.82886	1	1980	1980		37.812	3.8899	1	620290	+		36915	28354	24512	24522	41959	41959					0.04295553885390291
MLTWAGLY	8	Unmodified	_MLTWAGLY_					0	0	0			REV__ENST00000471692.1_1_5:137527956-137534147:-|nuORF	REV__ENST00000471692.1_1_5:137527956-137534147:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.20416259765625	2	477.741314	953.468075	-0.8241	-0.00039371	-3.758	-0.0017954	-4.5821	-0.0021891	477.7393932129121	30.579	0.56774	30.583	30.229	30.796	0.0037212					20	12	2	0	0	0	0.4196	1	2048	2048		42.474	14.22	1	37661	+		36916	17047	24513	24523	41960	41960					-0.010520583776042258
MLVEKSGVDM	10	Unmodified	_MLVEKSGVDM_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7734985351562	2	554.772485	1107.53042	-0.16813	-9.3273E-05	2.9284	0.0016246	2.7602	0.0015313	554.7740351677778	78.09	1.4177	78.653	78.254	79.672	0.56332					63	33	2	0	0	0	0.44803	1	8962	8962		60.118	5.3419	1	4128700	+		36917	21492	24514	24524	41961	41961					-0.019047000915861645
MLVERYFRNH	10	Unmodified	_MLVERYFRNH_					0	0	0		ENSG00000204007|ENST00000371763|GLT6D1	ENSG00000204007|ENST00000371763|GLT6D1	ENSG00000204007|ENST00000371763|GLT6D1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.60833740234375	3	455.567918	1363.68192	-1.2099	-0.00055121	-1.3104	-0.00059696	-2.5203	-0.0011482	455.56745065223845	71.153	0.58347	71.538	71.168	71.752	0.3845					32	13	3	0	0	0	0.37624	1	7863	7863		15.333	0	1	218760			36918	8406	24515	24525	41962	41962					0.014630420511593911
MLVGESPFP	9	Unmodified	_MLVGESPFP_					0	0	0		ENST00000586039.1_1_19:14581024-14581617:+|nuORF;ENST00000585839.5_1_19:14580313-14582593:+|nuORF;nc|ENSG00000065243|Q16513-5|PKN2;nc|ENSG00000065243|Q16513-4|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;ENSG00000123143|ENST00000242783|PKN1;nc|ENSG00000123143|Q16512-2|PKN1;nc|ENSG00000065243|Q16513-2|PKN2;ENSG00000065243|ENST00000370521|PKN2	ENST00000586039.1_1_19:14581024-14581617:+|nuORF	ENST00000586039.1_1_19:14581024-14581617:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7467346191406	2	488.744053	975.473554	-0.34584	-0.00016903	3.1342	0.0015318	2.7883	0.0013628	488.74543215520606	69.866	0.56629	70.413	70.162	70.728	0.54694					20	14	2	0	0	0	0.43338	1	7768	7768		55.504	5.4797	1	324770			36919	1123	24516	24526	41963	41963					-0.015163795857802143
MLVGESPFP	9	Unmodified	_MLVGESPFP_					0	0	0		ENST00000586039.1_1_19:14581024-14581617:+|nuORF;ENST00000585839.5_1_19:14580313-14582593:+|nuORF;nc|ENSG00000065243|Q16513-5|PKN2;nc|ENSG00000065243|Q16513-4|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;ENSG00000123143|ENST00000242783|PKN1;nc|ENSG00000123143|Q16512-2|PKN1;nc|ENSG00000065243|Q16513-2|PKN2;ENSG00000065243|ENST00000370521|PKN2	ENST00000586039.1_1_19:14581024-14581617:+|nuORF	ENST00000586039.1_1_19:14581024-14581617:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	488.744053	975.473554	-0.34204	-0.00016717	2.8224	0.0013794	2.4803	0.0012123	488.7454247741714	69.881	0.46954	70.265	70.072	70.542	0.38416	-0.074257	-0.00015423	NaN	55.504	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	289490			36920	1123	24516	24526							-0.015163795857802143
MLVISGGEGY	10	Unmodified	_MLVISGGEGY_					0	0	0		nc|ENSG00000008294|O60271-9|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-2|SPAG9;ENSG00000008294|ENST00000262013|SPAG9	nc|ENSG00000008294|O60271-9|SPAG9	nc|ENSG00000008294|O60271-9|SPAG9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.2498779296875	2	513.252243	1024.48993	0.206	0.00010573	-3.5383	-0.0018161	-3.3323	-0.0017103	513.2504117971379	71.021	0.94449	71.568	71.166	72.11	0.54756					58	22	4	0	0	0	0.77314	1	7930	7930		40.778	1.972	1	938560			36921	740	24517	24527	41964	41964					-0.021332984196760663
MLVNLKVN	8	Unmodified	_MLVNLKVN_					0	0	0		ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774658203125	2	465.775688	929.536823	0.52254	0.00024339	3.4867	0.001624	4.0093	0.0018674	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.90465	1	8397	8397		40.573	5.4206	1	1330400			36922	4399	24518	24528	41965	41965					0.06923605922099796
MLVNLKVN	8	Unmodified	_MLVNLKVN_					0	0	0		ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774353027344	2	465.775688	929.536823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.214	1	80.157	79.657	80.657	-0.056503								0	0	0	0.30045	1	8052	8052		40.573	1.7665	1				36923	4399	24518	24528	41966	41966					0.06923605922099796
MLVNMSLW	8	Unmodified	_MLVNMSLW_					0	0	0			REV__nc|ENSG00000171766|P50440-3|GATM	REV__nc|ENSG00000171766|P50440-3|GATM	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.2518615722656	2	497.248449	992.482345	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.128	1	28.088	27.588	28.588	-0.039907								0	0	0	0.29568	1	1397	1397		35.201	3.6218	1		+		36924	21765	24519	24529	41967	41967					-0.014197292209587431
MLVPIGDKPS	10	Unmodified	_MLVPIGDKPS_					0	0	0		ENSG00000100347|ENST00000350028|SAMM50;ENST00000474323.5_1_22:44371844-44392260:+|nuORF	ENSG00000100347|ENST00000350028|SAMM50	ENSG00000100347|ENST00000350028|SAMM50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.7922973632812	2	528.791535	1055.56852	-0.18975	-0.00010034	3.8893	0.0020567	3.6996	0.0019563	528.7934615759206	36.24	0.83895	36.271	35.927	36.765	0.031132					57	23	4	0	0	0	0.64457	1	2001	2001		47.657	1.6851	1	593790			36925	1831	24520	24530	41968	41968					0.04295553885413028
MLVPIGFC	8	Unmodified	_MLVPIGFC_					0	0	0			REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.22552490234375	2	440.226985	878.439417	0.94175	0.00041459	-4.4044	-0.0019389	-3.4626	-0.0015243	440.2248772505458	16.656	0.29826	16.734	16.585	16.883	0.07715					15	9	2	0	0	0	0.88393	1	125	125		33.493	2.9893	1	57015	+		36926	15486	24521	24531	41969	41969					-0.004664992783887101
MLVPKRKG	8	Unmodified	_MLVPKRKG_					0	0	0			REV__nc|ENSG00000091656|Q86UP3|ZFHX4	REV__nc|ENSG00000091656|Q86UP3|ZFHX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7908020019531	2	464.791672	927.568792	-1.1101	-0.00051598	-1.0809	-0.00050239	-2.191	-0.0010184	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.81548	1	2169	2169		20.482	0	1	415400	+		36927	17023	24522	24532	41970	41970					0.10211018395921201
MLVPKRKG	8	Unmodified	_MLVPKRKG_					0	0	0			REV__nc|ENSG00000091656|Q86UP3|ZFHX4	REV__nc|ENSG00000091656|Q86UP3|ZFHX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7906188964844	2	464.791672	927.568792	-1.14	-0.00052988	-0.92174	-0.00042842	-2.0618	-0.00095829	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.86791	1	1814	1814		28.254	0	1	286820	+		36928	17023	24522	24532	41971	41971					0.10211018395921201
MLVPKVLM	8	Unmodified	_MLVPKVLM_					0	0	0		ENST00000225964.9_1_17:48268227-48270392:-|nuORF	ENST00000225964.9_1_17:48268227-48270392:-|nuORF	ENST00000225964.9_1_17:48268227-48270392:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7779846191406	2	465.779385	929.544217	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.405	1	80.405	79.905	80.905	0								0	0	0	0.29353	1	7420	7420		28.254	3.7503	1				36929	9194	24523	24533	41972	41972					0.07662622198176905
MLVRLPDP	8	Unmodified	_MLVRLPDP_					0	0	0			REV__nc|ENSG00000157911|O60683-2|PEX10	REV__nc|ENSG00000157911|O60683-2|PEX10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76654052734375	2	470.767863	939.521173	-1.9239	-0.00090572	-1.5922	-0.00074958	-3.5162	-0.0016553	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.89494	1	1443	1443		37.159	5.2042	1	93177	+		36930	29957	24524	24534	41973	41973					0.04899319405046754
MLVVLMIVVF	10	Unmodified	_MLVVLMIVVF_					0	0	0			REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3536376953125	2	582.350174	1162.6858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.14	1	114.11	113.61	114.61	-0.024452								0	0	0	0.45132	1	12640	12640		19.36	0.25645	1		+		36931	19119	24525	24535	41974	41974					0.11095995500636491
MLVVVLYAWG	10	Unmodified	_MLVVVLYAWG_					0	0	0		ENSG00000205029|ENST00000378396|OR5D16	ENSG00000205029|ENST00000378396|OR5D16	ENSG00000205029|ENST00000378396|OR5D16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.8200073242188	2	575.820095	1149.62564	-1.4349	-0.00082625	3.0554	0.0017594	1.6205	0.00093313	575.8218620619822	61.574	0.85769	61.963	61.633	62.491	0.38845					39	19	3	0	0	0	0.51323	1	6574	6574		54.765	12.369	1	241440			36932	8507	24526	24536	41975	41975					0.05681021161763056
MLVVVLYAWG	10	Unmodified	_MLVVVLYAWG_					0	0	0		ENSG00000205029|ENST00000378396|OR5D16	ENSG00000205029|ENST00000378396|OR5D16	ENSG00000205029|ENST00000378396|OR5D16	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	575.820095	1149.62564	-0.6052	-0.00034848	2.1113	0.0012157	1.5061	0.00086722	575.8212451087645	61.457	1.2649	62.01	61.511	62.776	0.55386	0.023963	-0.00053618	NaN	54.765	50	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	270210			36933	8507	24526	24536							0.05681021161763056
MLWIKRKRLW	10	Unmodified	_MLWIKRKRLW_					0	0	0			REV__ENST00000567996.5_1_15:89804894-89805060:+|nuORF	REV__ENST00000567996.5_1_15:89804894-89805060:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6236267089844	3	477.291948	1428.85402	2.8123	0.0013423	-1.9615	-0.0009362	0.85084	0.0004061	477.29100738685395	112.37	0.50905	112.34	112.19	112.69	-0.025414					18	10	2	0	0	0	0.37624	1	12411	12411		12.207	1.2085	1	468170	+		36934	28890	24527	24537	41976	41976					0.15674238529322793
MLWKCKSF	8	Unmodified	_MLWKCKSF_					0	0	0			REV__ENST00000538204.5_1_X:131512512-131512599:-|nuORF	REV__ENST00000538204.5_1_X:131512512-131512599:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7928466796875	2	521.764266	1041.51398	0.0064605	3.3708E-06	-3.9573	-0.0020648	-3.9508	-0.0020614	521.761054394861	78.872	0.76123	79.422	78.855	79.616	0.55021					21	17	2	0	0	0	0.4196	1	8996	8996		37.159	8.0096	1	86357	+		36935	28435	24528	24538	41977	41977					-0.0051173646702409314
MLYFILVVVF	10	Unmodified	_MLYFILVVVF_					0	0	0			REV__ENSG00000204701|ENST00000641151|OR2J3	REV__ENSG00000204701|ENST00000641151|OR2J3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	622.3637084960938	2	622.361596	1242.70864	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.845	1	60.398	59.898	60.898	0.55323								0	0	0	0.45132	1	6341	6341		35.201	6.0307	1		+		36936	23517	24529	24539	41978	41978					0.09699337889765047
MLYRLYKP	8	Unmodified	_MLYRLYKP_					0	0	0		ENSG00000146918|ENST00000356309|NCAPG2;nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000467785.5_1_7:158448006-158486027:-|nuORF	ENSG00000146918|ENST00000356309|NCAPG2	ENSG00000146918|ENST00000356309|NCAPG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2561645507812	2	542.304613	1082.59467	0.18467	0.00010015	2.1049	0.0011415	2.2895	0.0012416	542.3054360842344	67.783	0.72506	68.168	67.633	68.358	0.38482					20	17	2	0	0	0	0.4196	1	7374	7374		42.474	29.515	1	120490			36937	4870	24530	24540	41979	41979					0.05667867847546404
MMANGILKV	9	Unmodified	_MMANGILKV_					0	0	0		nc|ENSG00000101444|P23526-2|AHCY;ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF;ENST00000560847.2_1_15:50709738-50710245:+|nuORF	nc|ENSG00000101444|P23526-2|AHCY	nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7694396972656	2	488.769548	975.524544	-0.73499	-0.00035924	0.94271	0.00046077	0.20771	0.00010152	488.7698998931259	27.534	0.70119	27.381	27.083	27.784	-0.15284					39	15	4	0	0	0	0.58151	1	1603	1603		47.916	0	1	650690			36938	1943	24531	24541	41980	41980					0.03580246187436842
MMARRDPKP	9	Unmodified	_MMARRDPKP_					0	0	0		ENSG00000171847|ENST00000538603|FAM90A1	ENSG00000171847|ENST00000538603|FAM90A1	ENSG00000171847|ENST00000538603|FAM90A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.2841796875	2	551.286428	1100.5583	-0.54371	-0.00029974	-3.9933	-0.0022014	-4.537	-0.0025012	551.2841438551218	60.462	1.0039	60.493	59.99	60.994	0.0312					66	29	3	0	0	0	0.55097	1	5606	5606		49.442	1.7842	1	112160			36939	6718	24532	24542	41981	41981					0.01204667679189697
MMEQRWPR	8	Oxidation (M)	_M(Oxidation (M))MEQRWPR_		M(0.996)M(0.004)EQRWPR		M(24)M(-24)EQRWPR	0	0	1			REV__ENST00000505113.5_1_5:422946-424033:+|nuORF	REV__ENST00000505113.5_1_5:422946-424033:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2667236328125	2	575.268235	1148.52192	-0.2653	-0.00015262	2.1034	0.00121	1.8381	0.0010574	575.2692112596873	74.127	0.67583	74.686	74.326	75.002	0.55891					42	15	3	0	0	0	0.9295	1	8369	8369		55.504	6.0627	2	632200	+		36940	27876	24533	24543	41982	41982					-0.04640209217541269
MMEQTNKETKN	11	Unmodified	_MMEQTNKETKN_					0	0	0			REV__ENSG00000205301|ENST00000511113|MGAT4D	REV__ENSG00000205301|ENST00000511113|MGAT4D	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.7678527832031	3	451.876088	1352.60644	0.78827	0.0003562	3.4969	0.0015802	4.2852	0.0019364	451.8777718581216	29.64	0.39066	29.624	29.5	29.891	-0.015167					15	10	2	0	0	0	0.17365	1	1522	1522		33.039	9.6615	1	17153	+		36941	23547	24534	24544	41983	41983					-0.0557634798210529
MMKGEPGFHLL	11	Oxidation (M)	_M(Oxidation (M))MKGEPGFHLL_		M(0.986)M(0.014)KGEPGFHLL		M(19)M(-19)KGEPGFHLL	0	0	1			REV__ENSG00000179477|ENST00000647874|ALOX12B	REV__ENSG00000179477|ENST00000647874|ALOX12B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	638.3170166015625	2	638.314851	1274.61515	-0.8486	-0.00054167	3.5022	0.0022355	2.6536	0.0016938	638.3170070427124	72.018	1.5366	72.403	71.877	73.413	0.38581					96	36	5	0	0	0	0.28254	1	8017	8017		75.043	9.5779	2	6693700	+		36942	22339	24535	24545	41984	41984		339			-0.011173295549497197
MMKGEPGFHLL	11	Oxidation (M)	_M(Oxidation (M))MKGEPGFHLL_		M(0.985)M(0.015)KGEPGFHLL		M(18)M(-18)KGEPGFHLL	0	0	1			REV__ENSG00000179477|ENST00000647874|ALOX12B	REV__ENSG00000179477|ENST00000647874|ALOX12B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	638.3167724609375	2	638.314851	1274.61515	1.2406	0.0007919	1.6201	0.0010342	2.8608	0.0018261	638.3157834446171	71.864	1.5253	72.415	72.071	73.597	0.55009					104	36	5	0	0	0	0.31387	2	8066	8054;8066		72.879	9.3454	2	7237600	+		36943	22339	24535	24545	41985;41986	41986		339			-0.011173295549497197
MMKWNVKKWSE	11	Unmodified	_MMKWNVKKWSE_					0	0	0			REV__ENST00000253048.9_1_19:47597719-47615690:-|nuORF	REV__ENST00000253048.9_1_19:47597719-47615690:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.5816345214844	3	489.580947	1465.72101	-0.084115	-4.1181E-05	2.1688	0.0010618	2.0847	0.0010206	489.5819587953439	67.75	0.63969	67.772	67.494	68.133	0.021599					64	28	3	0	0	0	0.6593	1	6375	6375		37.6	8.0491	1	220010	+		36944	24301	24536	24546	41987	41987					0.006780062905136219
MMKWNVKKWSE	11	Unmodified	_MMKWNVKKWSE_					0	0	0			REV__ENST00000253048.9_1_19:47597719-47615690:-|nuORF	REV__ENST00000253048.9_1_19:47597719-47615690:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	489.580947	1465.72101	-1.2858	-0.00062952	3.8853	0.0019022	2.5995	0.0012727	489.91731962556264	67.897	0.39859	67.897	67.696	68.094	0	0.17766	0.0016505	NaN	37.6	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82880	+		36945	24301	24536	24546							0.006780062905136219
MMKYNSKAD	9	2 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))KYNSKAD_		M(1)M(1)KYNSKAD		M(57)M(57)KYNSKAD	0	0	2			REV__ENSG00000110696|ENST00000228136|C11orf58	REV__ENSG00000110696|ENST00000228136|C11orf58	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.2426147460938	2	560.244092	1118.47363	-0.51849	-0.00029048	1.1962	0.00067014	0.67767	0.00037966	560.2447202398796	26.751	0.61838	26.792	26.47	27.088	0.040834					32	18	2	0	0	0	0.41566	1	1151	1151		56.721	10.749	1	72536	+		36946	17824	24537	24547	41988	41988		259;260			-0.08086747648076198
MMMMQQQQ	8	3 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))M(Oxidation (M))MQQQQ_		M(0.944)M(0.944)M(0.556)M(0.556)QQQQ		M(9)M(9)M(0)M(0)QQQQ	0	0	3			REV__ENSG00000198646|ENST00000359003|NCOA6	REV__ENSG00000198646|ENST00000359003|NCOA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.2053833007812	2	552.203055	1102.39156	0.24742	0.00013663	4.4057	0.0024328	4.6531	0.0025695	552.2053729685038	33.007	1.5157	32.952	32.444	33.96	-0.05434					81	35	3	0	0	0	0.91005	3	1975	1975;1993;2033		42.474	11.971	4	137640	+		36947	23350	24538	24548	41989;41990;41991	41989		357;358;359;360			-0.15554309323033522
MMMMQQQQ	8	3 Oxidation (M)	_M(Oxidation (M))M(Oxidation (M))MM(Oxidation (M))QQQQ_		M(0.958)M(0.556)M(0.556)M(0.93)QQQQ		M(10)M(0)M(0)M(8)QQQQ	0	0	3			REV__ENSG00000198646|ENST00000359003|NCOA6	REV__ENSG00000198646|ENST00000359003|NCOA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.2055053710938	2	552.203055	1102.39156	0.12735	7.0322E-05	4.4196	0.0024405	4.5469	0.0025108	552.2054626323405	32.864	1.6355	32.862	32.325	33.96	-0.0016327					70	38	2	0	0	0	0.84634	2	1901	1901;1919		60.294	23.135	4	141290	+		36948	23350	24538	24548	41992;41993	41992		357;358;359;360			-0.15554309323033522
MMPQKKRR	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MMPQKKRR_					1	0	0		nc|ENSG00000167210|Q8IVV2|LOXHD1;ENSG00000167210|ENST00000642948|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.8128051757812	2	558.81007	1115.60559	0.89831	0.00050198	2.4767	0.001384	3.375	0.001886	558.8113896554233	16.412	0.36402	15.925	15.779	16.143	-0.48718					9	7	2	0	0	0	0.92973	1	127	127		50.025	7.1603	1	117810			36949	6278	24539	24549	41994	41994					0.05240946950175385
MMPRLGSPA	9	Unmodified	_MMPRLGSPA_					0	0	0		ENST00000251412.7_1_17:40811329-40811476:+|nuORF	ENST00000251412.7_1_17:40811329-40811476:+|nuORF	ENST00000251412.7_1_17:40811329-40811476:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.2419738769531	2	480.243698	958.472843	-0.26606	-0.00012778	-1.144	-0.00054941	-1.4101	-0.00067719	480.24316227273624	32.835	0.74734	32.78	32.401	33.148	-0.05434					33	17	3	0	0	0	0.74721	1	1938	1938		37.159	1.5408	1	181300			36950	9300	24540	24550	41995	41995					-0.008054975064737846
MMPYAFFAVK	10	Unmodified	_MMPYAFFAVK_					0	0	0			REV__ENST00000577661.1_1_8:107282464-107284029:+|nuORF	REV__ENST00000577661.1_1_8:107282464-107284029:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	602.8007202148438	2	602.798306	1203.58206	0.97328	0.00058669	3.7763	0.0022763	4.7495	0.002863	602.8004011190249	72.823	0.83628	72.952	72.522	73.358	0.12921					70	29	3	0	0	0	0.53935	1	6660	6660		53.351	5.3919	1	532890	+		36951	29012	24541	24551	41996	41996					-0.011589116070354066
MMRLTLIL	8	Unmodified	_MMRLTLIL_					0	0	0		ENSG00000198886|ENST00000361381|MT-ND4	ENSG00000198886|ENST00000361381|MT-ND4	ENSG00000198886|ENST00000361381|MT-ND4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.7966613769531	2	495.795566	989.576579	1.3672	0.00067785	2.0859	0.0010342	3.4531	0.001712	495.79626399989235	105.14	1.0402	105.29	104.99	106.03	0.15583					65	26	4	0	0	0	0.92394	1	12858	12858		47.657	1.6851	1	604160			36952	8358	24542	24552	41997	41997					0.08137409601192758
MMTDTQDGP	9	Unmodified	_MMTDTQDGP_					0	0	0		nc|ENSG00000115155|Q9HC10-3|OTOF	nc|ENSG00000115155|Q9HC10-3|OTOF	nc|ENSG00000115155|Q9HC10-3|OTOF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.2827453613281	2	498.194067	994.373582	0.70489	0.00035117	-0.58054	-0.00028922	0.12435	6.1952E-05	498.1936071509832	32.632	0.76283	32.843	32.55	33.313	0.21168					38	17	3	0	0	0	0.20789	1	2361	2361		47.916	18.766	1	840900			36953	14858	24543	24553	41998	41998					-0.12382984981900336
MMTWGSIR	8	Unmodified	_MMTWGSIR_					0	0	0			REV__ENST00000372086.3_1_1:45811608-45813620:-|nuORF	REV__ENST00000372086.3_1_1:45811608-45813620:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2336120605469	2	491.235873	980.457192	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.35	1	73.737	73.237	74.237	0.38779								0	0	0	0.28057	1	8228	8228		55.504	0.72789	1		+		36954	25707	24544	24554	41999	41999					-0.0338178402352014
MMVHSRSHQ	9	Unmodified	_MMVHSRSHQ_					0	0	0		ENSG00000115486|ENST00000233838|GGCX;nc|ENSG00000115486|P38435-2|GGCX	ENSG00000115486|ENST00000233838|GGCX	ENSG00000115486|ENST00000233838|GGCX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.7568969726562	2	556.758035	1111.50152	-1.1808	-0.00065742	0.083044	4.6235E-05	-1.0978	-0.00061119	556.7579565354125	38.992	0.81724	39.547	39.236	40.053	0.55449					39	18	3	0	0	0	0.51592	1	3254	3254		51.193	0	1	713790			36955	2849	24545	24555	42000	42000					-0.04977379877345811
MMWHGLQN	8	Unmodified	_MMWHGLQN_					0	0	0		ENSG00000184560|ENST00000333870|SPEM2	ENSG00000184560|ENST00000333870|SPEM2	ENSG00000184560|ENST00000333870|SPEM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.2254333496094	2	508.725672	1015.43679	-1.1056	-0.00056247	-0.99224	-0.00050478	-2.0979	-0.0010672	508.72470773188326	66.605	0.62052	66.634	66.393	67.013	0.028587					48	29	2	0	0	0	0.92176	1	6333	6333		46.766	9.6073	1	137630			36956	7621	24546	24556	42001	42001					-0.07030954683330037
MNALLQTQ	8	Unmodified	_MNALLQTQ_					0	0	0		ENST00000301071.11_1_12:49578606-49578654:-|nuORF	ENST00000301071.11_1_12:49578606-49578654:-|nuORF	ENST00000301071.11_1_12:49578606-49578654:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7514953613281	2	459.739302	917.464052	0.021452	9.8625E-06	1.5927	0.00073221	1.6141	0.00074207	459.7399702956329	23.745	0.55502	23.363	23.108	23.663	-0.38178					22	12	2	0	0	0	0.4196	1	1080	1080		15.642	0	1	148680			36957	9801	24547	24557	42002	42002					0.0020185212869137104
MNIRKCDG	8	Unmodified	_MNIRKCDG_					0	0	0			REV__ENSG00000100994|ENST00000216962|PYGB	REV__ENSG00000100994|ENST00000216962|PYGB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.72283935546875	2	468.723129	935.431706	-1.0822	-0.00050726	1.3689	0.00064162	0.28667	0.00013437	468.7236147293877	70.106	0.76979	70.177	69.93	70.7	0.071037					66	37	3	0	0	0	0.84341	1	6355	6355		24.203	0	1	1251800	+		36958	17235	24548	24558	42003	42003					-0.03859258545969624
MNKVKKSLLR	10	Unmodified	_MNKVKKSLLR_					0	0	0			REV__nc|ENSG00000115009|P78556-2|CCL20	REV__nc|ENSG00000115009|P78556-2|CCL20	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.25775146484375	3	406.256792	1215.74855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.478	1	40.559	40.059	41.059	0.081345								0	0	0	0.45132	1	2573	2573		14.086	0.57807	1		+		36959	18079	24549	24559	42004	42004					0.14930277613052567
MNLHHSIF	8	Unmodified	_MNLHHSIF_					0	0	0			REV__ENSG00000064313|ENST00000378164|TAF2	REV__ENSG00000064313|ENST00000378164|TAF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.74755859375	2	499.747462	997.480371	-0.85273	-0.00042615	-0.17921	-8.9557E-05	-1.0319	-0.00051571	499.74724797378053	74.742	3.1094	75.133	73.907	77.016	0.3911					155	76	3	0	0	0	0.60357	1	8443	8443		71.296	0	1	1032200	+		36960	16475	24550	24560	42005	42005					-0.0184702191455699
MNNNWNVCF	9	Unmodified	_MNNNWNVCF_					0	0	0		ENST00000464199.5_1_20:9351789-9459633:+|nuORF;nc|ENSG00000101333|Q15147-2|PLCB4;ENST00000473151.5_1_20:9351789-9360719:+|nuORF	ENST00000464199.5_1_20:9351789-9459633:+|nuORF	ENST00000464199.5_1_20:9351789-9459633:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.2540283203125	2	571.231319	1140.44808	-1.1454	-0.00065427	0.29998	0.00017136	-0.84539	-0.00048292	571.2313716088389	72.631	0.99146	73.017	72.583	73.575	0.38582					50	23	3	0	0	0	0.20789	1	8120	8120		33.516	0	1	161950			36961	12086	24551	24561	42006	42006					-0.11652177379892237
MNQKLFDLRGK	11	Unmodified	_MNQKLFDLRGK_					0	0	0		nc|ENSG00000130598|P48788-2|TNNI2;ENSG00000130598|ENST00000381911|TNNI2	nc|ENSG00000130598|P48788-2|TNNI2	nc|ENSG00000130598|P48788-2|TNNI2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2584228515625	3	450.583456	1348.72854	-0.70265	-0.0003166	3.4248	0.0015432	2.7221	0.0012266	450.58492413084684	26.216	0.48828	25.959	25.726	26.214	-0.2572					17	10	2	0	0	0	0.17536	1	1408	1408		45.908	7.1545	1	69933			36962	3661	24552	24562	42007	42007					0.06812481882411703
MNREINNP	8	Unmodified	_MNREINNP_					0	0	0		nc|ENSG00000163714|O15042-3|U2SURP;nc|ENSG00000163714|O15042-2|U2SURP;ENSG00000163714|ENST00000473835|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.2960510253906	2	494.237458	986.460364	-1.0025	-0.00049547	-2.9456	-0.0014558	-3.9481	-0.0019513	494.23589365393076	22.15	0.47568	22.093	21.94	22.416	-0.057203					28	20	2	0	0	0	0.4196	1	660	660		29.15	0	1	44908			36963	15051	24553	24563	42008	42008					-0.033408176451757754
MNRILVKVF	9	Unmodified	_MNRILVKVF_					0	0	0			REV__ENST00000558009.1_1_15:86262473-86265428:+|nuORF	REV__ENST00000558009.1_1_15:86262473-86265428:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3408203125	2	560.338987	1118.66342	3.1454	0.0017625	-0.73406	-0.00041132	2.4113	0.0013512	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.7932	1	13040	13040		23.042	3.6825	1	151040	+		36964	28725	24554	24564	42009	42009					0.1088353214727249
MNRILVKVF	9	Unmodified	_MNRILVKVF_					0	0	0			REV__ENST00000558009.1_1_15:86262473-86265428:+|nuORF	REV__ENST00000558009.1_1_15:86262473-86265428:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.842529296875	2	560.338987	1118.66342	1.3844	0.00077572	1.2296	0.00068898	2.6139	0.0014647	560.3396080868185	114.62	2.2118	114.64	113.84	116.05	0.026466					86	62	2	0	0	0	0.7932	1	12520	12520		17.365	0	1	96310	+		36965	28725	24554	24564	42010	42010					0.1088353214727249
MNRILVKVF	9	Unmodified	_MNRILVKVF_					0	0	0			REV__ENST00000558009.1_1_15:86262473-86265428:+|nuORF	REV__ENST00000558009.1_1_15:86262473-86265428:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3402709960938	2	560.338987	1118.66342	-1.4185	-0.00079484	3.8922	0.0021809	2.4736	0.0013861	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	1	12932	12932		24.203	1.1603	1	4071000	+		36966	28725	24554	24564	42011	42011					0.1088353214727249
MNTISEEDFAH	11	Unmodified	_MNTISEEDFAH_					0	0	0		ENSG00000155970|ENST00000318063|MICU3	ENSG00000155970|ENST00000318063|MICU3	ENSG00000155970|ENST00000318063|MICU3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	647.3037109375	2	647.274435	1292.53432	1.4331	0.00092758	-0.096838	-6.2681E-05	1.3362	0.0008649	647.2745659789267	53.037	0.74528	53.652	53.283	54.028	0.61436					23	17	2	0	0	0	0.16261	1	5389	5389		41.427	18.847	1	140670			36967	5355	24555	24565	42012	42012					-0.10024939064146565
MNTKKKDLE	9	Unmodified	_MNTKKKDLE_					0	0	0		ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.2959594726562	2	553.797349	1105.58014	-0.14197	-7.862E-05	-4.1572	-0.0023022	-4.2992	-0.0023809	553.7956902824818	71.77	1.9369	72.32	71.66	73.597	0.55009					121	46	4	0	0	0	0.41566	1	7991	7991		56.721	5.3856	1	1387300			36968	5483	24556	24566	42013	42013					0.03157750908712842
MNTQLPTLLIA	11	Unmodified	_MNTQLPTLLIA_					0	0	0		ENST00000572869.1_1_16:25162908-25186269:+|nuORF;ENSG00000205629|ENST00000399069|LCMT1;nc|ENSG00000205629|Q9UIC8-2|LCMT1	ENST00000572869.1_1_16:25162908-25186269:+|nuORF	ENST00000572869.1_1_16:25162908-25186269:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5645751953125	3	405.565291	1213.67404	-1.8603	-0.00075448	0.59447	0.00024109	-1.2659	-0.00051339	405.5653949658049	63.143	1.4987	63.257	62.721	64.22	0.11388					139	74	3	0	0	0	0.72891	1	5515	5515		26.753	1.6853	1	273590			36969	8535	24557	24567	42014	42014					0.0757547001101102
MNTQLPTLLIA	11	Unmodified	_MNTQLPTLLIA_					0	0	0		ENST00000572869.1_1_16:25162908-25186269:+|nuORF;ENSG00000205629|ENST00000399069|LCMT1;nc|ENSG00000205629|Q9UIC8-2|LCMT1	ENST00000572869.1_1_16:25162908-25186269:+|nuORF	ENST00000572869.1_1_16:25162908-25186269:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5638427734375	3	405.565291	1213.67404	0.37514	0.00015214	-2.1837	-0.00088564	-1.8086	-0.0007335	405.8987384717414	61.089	0.62099	61.208	60.689	61.31	0.11901					42	26	2	0	0	0	0.74002	1	5292	5292		24.276	10.768	1	745630			36970	8535	24557	24567	42015	42015					0.0757547001101102
MNTVTSKSN	9	Unmodified	_MNTVTSKSN_					0	0	0		nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2;ENSG00000143882|ENST00000272238|ATP6V1C2	nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.2353820800781	2	491.237124	980.459695	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.658	1	25.626	25.126	26.126	-0.032125								0	0	0	0.30416	1	1037	1037		29.15	3.6994	1				36971	4673	24558	24568	42016	42016					-0.031316570848844094
MPAKGKKG	8	Oxidation (M)	_M(Oxidation (M))PAKGKKG_		M(1)PAKGKKG		M(45)PAKGKKG	0	0	1		ENSG00000240204|ENST00000462322|SMKR1	ENSG00000240204|ENST00000462322|SMKR1	ENSG00000240204|ENST00000462322|SMKR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	416.7378234863281	2	416.739105	831.463658	-1.8991	-0.00079144	-3.8816	-0.0016176	-5.7807	-0.002409	416.7376071122066	113.12	0.20975	113.09	113.01	113.22	-0.032333					8	5	2	0	0	0	0.9159	1	12070	12070		44.531	16.277	1	873100			36972	8777	24559	24569	42017	42017		156			0.04118477199494919
MPALILKN	8	Unmodified	_MPALILKN_					0	0	0			REV__ENSG00000167264|ENST00000565263|DUS2	REV__ENSG00000167264|ENST00000565263|DUS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.27447509765625	2	450.272781	898.531009	1.3234	0.00059587	2.0996	0.00094537	3.4229	0.0015412	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.86288	1	9857	9857		26.796	2.5934	1	51698000	+		36973	21371	24560	24570	42018	42018					0.07768507410446546
MPAPPLAFSDP	11	Unmodified	_MPAPPLAFSDP_					0	0	0		ENST00000532998.5_1_17:8077791-8078022:-|nuORF	ENST00000532998.5_1_17:8077791-8078022:-|nuORF	ENST00000532998.5_1_17:8077791-8078022:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.7787475585938	2	571.781167	1141.54778	-0.93444	-0.0005343	-2.6121	-0.0014935	-3.5465	-0.0020278	571.7796222487941	57.04	0.62537	57.437	57.116	57.741	0.39672					28	14	3	0	0	0	0.53495	1	5907	5907		49.442	3.4693	1	430830			36974	13388	24561	24571	42019	42019					-0.01733036494283624
MPAPVISKREP	11	Unmodified	_MPAPVISKREP_					0	0	0			REV__nc|ENSG00000213676|Q99941-2|ATF6B	REV__nc|ENSG00000213676|Q99941-2|ATF6B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.8792114257812	2	612.842091	1223.66963	3.0911	0.0018943	-1.3435	-0.00082335	1.7476	0.001071	613.3413445306943	104.98	0.37637	104.94	104.81	105.19	-0.040382					11	8	2	0	0	0	0.17431	1	11540	11540		24.519	0	1	82584	+		36975	23629	24562	24572	42020	42020					0.06674005588115506
MPAVKAIIYQY	11	Unmodified	_MPAVKAIIYQY_					0	0	0		ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1;ENSG00000079459|ENST00000220584|FDFT1	ENST00000446331.6_1_8:11660331-11696115:+|nuORF	ENST00000446331.6_1_8:11660331-11696115:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	649.35791015625	2	648.854667	1295.69478	0.60352	0.0003916	-1.0392	-0.00067431	-0.43571	-0.00028271	648.8540596650759	67.616	0.97833	68.001	67.633	68.612	0.38515					48	23	3	0	0	0	0.085268	4	7432	7408;7419;7432;7445		95.815	44.622	1	599800			36976	1422	24563	24573	42021;42022;42023;42024	42023					0.058760603906875986
MPAVKAIIYQY	11	Unmodified	_MPAVKAIIYQY_					0	0	0		ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1;ENSG00000079459|ENST00000220584|FDFT1	ENST00000446331.6_1_8:11660331-11696115:+|nuORF	ENST00000446331.6_1_8:11660331-11696115:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	648.8527221679688	2	648.854667	1295.69478	1.5312	0.0009935	-1.9436	-0.0012611	-0.41242	-0.0002676	648.8533941872946	67.578	0.76074	68.126	67.773	68.534	0.54819					43	17	3	0	0	0	0.28254	4	7427	7416;7427;7440;7451		75.043	35.964	1	577730			36977	1422	24563	24573	42025;42026;42027;42028	42026					0.058760603906875986
MPAWWKVI	8	Unmodified	_MPAWWKVI_					0	0	0		ENST00000547404.1_1_12:105508200-105512263:+|nuORF	ENST00000547404.1_1_12:105508200-105512263:+|nuORF	ENST00000547404.1_1_12:105508200-105512263:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.4562377929688	2	515.780773	1029.54699	1.5934	0.00082184	-3.0327	-0.0015642	-1.4393	-0.00074237	515.7791568477953	35.912	0.95809	36.352	36.074	37.033	0.44043					37	23	2	0	0	0	0.4196	1	2847	2847		29.842	8.8946	1	1642400			36978	13607	24564	24574	42029	42029					0.03340213647334167
MPCCDWIL	8	Unmodified	_MPCCDWIL_					0	0	0			REV__ENSG00000185313|ENST00000449082|SCN10A	REV__ENSG00000185313|ENST00000449082|SCN10A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.7082824707031	2	490.705559	979.396566	0.42207	0.00020711	2.8027	0.0013753	3.2247	0.0015824	490.7067589659832	28.073	0.86614	28.109	27.872	28.738	0.036068					46	28	2	0	0	0	0.90024	1	1305	1305		39.021	12.225	1	78086	+		36979	22760	24565	24575	42030	42030					-0.09395637398131385
MPEGRSHCAC	10	2 Carbamidomethyl (C)	_MPEGRSHC(Carbamidomethyl (C))AC(Carbamidomethyl (C))_	MPEGRSHC(1)AC(1)		MPEGRSHC(59)AC(59)		0	2	0		nc|ENSG00000073737|Q9BPW9-4|DHRS9	nc|ENSG00000073737|Q9BPW9-4|DHRS9	nc|ENSG00000073737|Q9BPW9-4|DHRS9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	602.7362670898438	2	602.736442	1203.45833	0.44756	0.00026976	-1.9833	-0.0011954	-1.5357	-0.00092562	602.7355969950997	38.003	1.3917	38.316	37.98	39.372	0.31312					87	34	5	0	0	0	0.46422	1	3083	3083		58.782	15.918	1	3322600			36980	14778	24566	24576	42031	42031	195;196				-0.13525937716917724
MPEPQAPGRYF	11	Unmodified	_MPEPQAPGRYF_					0	0	0		nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	nc|ENSG00000211899|P01871-1|IGHM	nc|ENSG00000211899|P01871-1|IGHM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	646.808837890625	2	646.808248	1291.60194	-1.1117	-0.00071906	1.1459	0.00074119	0.034207	2.2125E-05	646.8089227755572	57.448	1.4063	57.842	57.495	58.901	0.39408					94	34	5	0	0	0	0.026828	6	5989	5954;5966;5978;5989;6002;6016		106.68	41.218	1	8615500			36981	15242	24567	24577	42032;42033;42034;42035;42036;42037	42035					-0.03219444342698807
MPEPQAPGRYF	11	Unmodified	_MPEPQAPGRYF_					0	0	0		nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	nc|ENSG00000211899|P01871-1|IGHM	nc|ENSG00000211899|P01871-1|IGHM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	646.808349609375	2	646.808248	1291.60194	2.1585	0.0013961	-2.0545	-0.0013289	0.10397	6.7248E-05	646.8068647881283	57.339	1.2777	57.894	57.519	58.797	0.55513					90	31	4	0	0	0	0.026828	7	5976	5944;5953;5964;5976;5989;6002;6014		106.68	39.313	1	8762100			36982	15242	24567	24577	42038;42039;42040;42041;42042;42043;42044	42041					-0.03219444342698807
MPGTVITTTLE	11	Unmodified	_MPGTVITTTLE_					0	0	0		nc|ENSG00000217128|Q8TF40-3|FNIP1;ENSG00000217128|ENST00000510461|FNIP1	nc|ENSG00000217128|Q8TF40-3|FNIP1	nc|ENSG00000217128|Q8TF40-3|FNIP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.828857421875	2	581.804839	1161.59513	-0.93872	-0.00054615	-0.74663	-0.00043439	-1.6854	-0.00098055	581.8045353970126	59.253	0.85726	59.806	59.498	60.355	0.55323					44	21	3	0	0	0	0.14968	1	6288	6288		45.972	5.9141	1	255330			36983	8659	24568	24578	42045	42045					0.02079197986086001
MPGTVITTTLE	11	Unmodified	_MPGTVITTTLE_					0	0	0		nc|ENSG00000217128|Q8TF40-3|FNIP1;ENSG00000217128|ENST00000510461|FNIP1	nc|ENSG00000217128|Q8TF40-3|FNIP1	nc|ENSG00000217128|Q8TF40-3|FNIP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	581.804839	1161.59513	-0.35348	-0.00020566	1.4434	0.00083977	1.0899	0.00063411	581.8036127417176	59.974	0.12451	59.975	59.932	60.057	0.00051498	0.12234	0.00026371	NaN	45.972	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31597			36984	8659	24568	24578							0.02079197986086001
MPHLRLVLP	9	Unmodified	_MPHLRLVLP_					0	0	0		ENSG00000189132|ENST00000329357|FAM47B	ENSG00000189132|ENST00000329357|FAM47B	ENSG00000189132|ENST00000329357|FAM47B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3270874023438	2	538.325879	1074.63721	0.84014	0.00045227	0.94305	0.00050767	1.7832	0.00095994	538.326371026974	100.85	3.8483	100.99	100.33	104.18	0.14352					341	94	6	0	0	0	0.77546	1	10836	10836		31.955	0.42505	1	92159000			36985	7991	24569	24579	42046	42046					0.10287262975771228
MPIMGHLVD	9	Unmodified	_MPIMGHLVD_					0	0	0		nc|ENSG00000036565|P54219-2|SLC18A1;nc|ENSG00000036565|P54219-3|SLC18A1;ENSG00000036565|ENST00000276373|SLC18A1	nc|ENSG00000036565|P54219-2|SLC18A1	nc|ENSG00000036565|P54219-2|SLC18A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.75360107421875	2	506.751356	1011.48816	1.6242	0.00082308	2.9873	0.0015138	4.6116	0.0023369	506.7519441995842	102.21	1.1478	102.47	101.73	102.88	0.26322					46	28	3	0	0	0	0.69914	1	12413	12413		40.573	4.1259	1	529330			36986	904	24570	24580	42047	42047					-0.01712630709300811
MPIRAKNPNIR	11	Unmodified	_MPIRAKNPNIR_					0	0	0			REV__ENSG00000173200|ENST00000464300|PARP15	REV__ENSG00000173200|ENST00000464300|PARP15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.25732421875	3	437.255563	1308.74486	2.3979	0.0010485	1.5911	0.00069571	3.989	0.0017442	437.25617297786823	99.22	2.8692	99.166	98.246	101.11	-0.053734					176	66	3	0	0	0	0.72374	1	10745	10745		27.644	1.5805	1	988170	+		36987	21900	24571	24581	42048	42048					0.10283607839187425
MPIREGDTVTL	11	Unmodified	_MPIREGDTVTL_					0	0	0		nc|ENSG00000012124|P20273-4|CD22;nc|ENSG00000012124|P20273-3|CD22;ENSG00000012124|ENST00000085219|CD22;nc|ENSG00000012124|P20273-2|CD22;nc|ENSG00000012124|P20273-5|CD22;ENST00000600655.1_1_19:35831797-35832055:+|nuORF	nc|ENSG00000012124|P20273-4|CD22	nc|ENSG00000012124|P20273-4|CD22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	616.3209838867188	2	616.321188	1230.62782	0.84577	0.00052126	-0.85817	-0.00052891	-0.012405	-7.6456E-06	616.3204739671289	54.285	2.0079	54.692	54.277	56.285	0.40663					92	47	3	0	0	0	0.097682	5	5512	5504;5512;5524;5536;5548		93.598	21.72	1	2713300			36988	797	24572	24582	42049;42050;42051;42052;42053	42050					0.021734051089197237
MPIREGDTVTL	11	Unmodified	_MPIREGDTVTL_					0	0	0		nc|ENSG00000012124|P20273-4|CD22;nc|ENSG00000012124|P20273-3|CD22;ENSG00000012124|ENST00000085219|CD22;nc|ENSG00000012124|P20273-2|CD22;nc|ENSG00000012124|P20273-5|CD22;ENST00000600655.1_1_19:35831797-35832055:+|nuORF	nc|ENSG00000012124|P20273-4|CD22	nc|ENSG00000012124|P20273-4|CD22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	616.3217163085938	2	616.321188	1230.62782	0.083565	5.1503E-05	-0.29915	-0.00018437	-0.21558	-0.00013287	616.320908689201	54.117	1.5085	54.702	54.291	55.799	0.58474					54	35	2	0	0	0	0.097682	2	5522	5510;5522		93.598	14.774	1	3268500			36989	797	24572	24582	42054;42055	42055					0.021734051089197237
MPIVDKYDLSD	11	Unmodified	_MPIVDKYDLSD_					0	0	0			REV__ENST00000571644.1_1_16:31371321-31371865:+|nuORF	REV__ENST00000571644.1_1_16:31371321-31371865:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3929443359375	2	648.313029	1294.6115	1.8781	0.0012176	-0.99917	-0.00064777	0.87897	0.00056985	648.3124988126834	107.15	0.27647	107.19	107.03	107.3	0.035622					9	6	2	0	0	0	0.17347	1	11771	11771		29.17	0	1	89416	+		36990	19636	24573	24583	42056	42056					-0.024017208478426255
MPKFSMPGF	9	Unmodified	_MPKFSMPGF_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2483520507812	2	521.248449	1040.48234	0.032159	1.6763E-05	0.10295	5.366E-05	0.1351	7.0423E-05	521.2483888976767	74.337	1.3988	74.729	74.044	75.443	0.39111					77	33	4	0	0	0	0.0080651	3	8361	8349;8361;8373		134.81	55.098	1	3622500			36991	3371	24574	24584	42057;42058;42059	42058					-0.03627729220966103
MPKFSMPGF	9	Unmodified	_MPKFSMPGF_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.2481079101562	2	521.248449	1040.48234	0.05485	2.8591E-05	-0.11219	-5.8478E-05	-0.057338	-2.9887E-05	521.2482823458606	74.15	1.498	74.709	74.2	75.698	0.5589					76	35	3	0	0	0	0.01944	4	8365	8355;8365;8377;8409		125.81	57.969	1	4144200			36992	3371	24574	24584	42060;42061;42062;42063	42061					-0.03627729220966103
MPKLATQSN	9	Unmodified	_MPKLATQSN_					0	0	0		ENSG00000106211|ENST00000248553|HSPB1;ENST00000423240.1_1_9:74622799-74623024:-|nuORF	ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2578125	2	495.257859	988.501166	-1.7096	-0.00084669	4.0161	0.001989	2.3065	0.0011423	495.25992726495855	40.741	2.1466	41.33	40.797	42.943	0.58915					138	58	4	0	0	0	0.55097	1	3585	3585		49.442	6.5773	1	7011700			36993	2284	24575	24585	42064	42064					0.006455236744500326
MPKVHIEF	8	Unmodified	_MPKVHIEF_					0	0	0		nc|ENSG00000115677|Q00341-2|HDLBP;ENSG00000115677|ENST00000310931|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.7695617675781	2	500.767863	999.521173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.746	1	54.738	54.238	55.238	-0.0077095								0	0	0	0.29883	1	4842	4842		51.335	1.8939	1				36994	2866	24576	24586	42065	42065					0.02139319405068818
MPKVHIEF	8	Unmodified	_MPKVHIEF_					0	0	0		nc|ENSG00000115677|Q00341-2|HDLBP;ENSG00000115677|ENST00000310931|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.7673645019531	2	500.767863	999.521173	-0.44921	-0.00022495	0.55438	0.00027761	0.10517	5.2663E-05	500.76806829817474	54.757	0.55186	54.731	54.427	54.978	-0.025955					28	17	2	0	0	0	0.93293	1	4966	4966		51.335	8.9393	1	186400			36995	2866	24576	24586	42066	42066					0.02139319405068818
MPKVHIEF	8	Unmodified	_MPKVHIEF_					0	0	0		nc|ENSG00000115677|Q00341-2|HDLBP;ENSG00000115677|ENST00000310931|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.7681884765625	2	500.767863	999.521173	-1.3667	-0.00068441	1.702	0.00085231	0.33528	0.0001679	500.7686833388172	54.854	0.59225	54.881	54.48	55.072	0.027142					28	18	2	0	0	0	0.83456	1	4873	4873		60.972	16.595	1	198860			36996	2866	24576	24586	42067	42067					0.02139319405068818
MPLAIQPPV	9	Unmodified	_MPLAIQPPV_					0	0	0			REV__nc|ENSG00000107949|Q9P287-2|BCCIP	REV__nc|ENSG00000107949|Q9P287-2|BCCIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.2784729003906	2	483.278063	964.541574	0.73654	0.00035596	0.73002	0.0003528	1.4666	0.00070876	483.2784389878966	95.093	2.0041	95.256	94.701	96.705	0.16307					124	47	4	0	0	0	0.39977	1	9833	9833		57.811	19.005	1	1266400	+		36997	29768	24577	24587	42068	42068					0.057884900648673465
MPLAIQPPV	9	Unmodified	_MPLAIQPPV_					0	0	0			REV__nc|ENSG00000107949|Q9P287-2|BCCIP	REV__nc|ENSG00000107949|Q9P287-2|BCCIP	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	483.278063	964.541574	-0.06248	-3.0195E-05	2.2173	0.0010716	2.1549	0.0010414	483.279169892733	95.056	2.0833	95.476	94.977	97.06	0.41964	0.12459	0.0005911	NaN	57.811	91	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	600860	+		36998	29768	24577	24587							0.057884900648673465
MPLEDMNEF	9	Unmodified	_MPLEDMNEF_					0	0	0		ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2	ENSG00000117748|ENST00000373912|RPA2	ENSG00000117748|ENST00000373912|RPA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.2332763671875	2	563.233193	1124.45183	0.50287	0.00028323	-0.36427	-0.00020517	0.13859	7.8061E-05	563.2328344134445	78.052	1.0349	78.458	78.059	79.094	0.4053					56	24	3	0	0	0	0.0030376	4	8895	8884;8895;8908;8919		139.97	64.927	1	1336800			36999	3000	24578	24588	42069;42070;42071;42072	42070					-0.1054155239667125
MPLEDMNEF	9	Unmodified	_MPLEDMNEF_					0	0	0		ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2	ENSG00000117748|ENST00000373912|RPA2	ENSG00000117748|ENST00000373912|RPA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.2333374023438	2	563.233193	1124.45183	0.32375	0.00018235	-0.16528	-9.3091E-05	0.15847	8.9255E-05	563.2329196919005	77.936	1.07	78.499	78.051	79.121	0.56332					55	25	3	0	0	0	0.051853	6	8903	8894;8903;8916;8929;8940;8952		107.01	35.712	1	1733700			37000	3000	24578	24588	42073;42074;42075;42076;42077;42078	42074					-0.1054155239667125
MPLGARILF	9	Unmodified	_MPLGARILF_					0	0	0		ENST00000448704.5_1_7:43687059-43687284:-|nuORF;ENSG00000106603|ENST00000223336|COA1	ENST00000448704.5_1_7:43687059-43687284:-|nuORF	ENST00000448704.5_1_7:43687059-43687284:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7742614746094	2	509.29933	1016.58411	0.663	0.00033766	-1.026	-0.00052252	-0.36296	-0.00018485	509.29892722453224	74.428	0.60874	74.987	74.799	75.408	0.55891					30	14	3	0	0	0	0.20789	1	8427	8427		55.504	21.989	1	440230			37001	2305	24579	24589	42079	42079					0.07647885193114234
MPLKKKGLH	9	Unmodified	_MPLKKKGLH_					0	0	0			REV__ENSG00000101544|ENST00000262198|ADNP2	REV__ENSG00000101544|ENST00000262198|ADNP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.7799072265625	2	526.325879	1050.63721	-0.040206	-2.1162E-05	-1.8942	-0.00099699	-1.9344	-0.0010182	526.324795847586	63.183	0.74657	63.178	62.521	63.268	-0.0055504					55	32	2	0	0	0	0.20789	1	5808	5808		52.299	13.493	1	61551	+		37002	17288	24580	24590	42080	42080					0.11391262975757854
MPLKKKGLH	9	Unmodified	_MPLKKKGLH_					0	0	0			REV__ENSG00000101544|ENST00000262198|ADNP2	REV__ENSG00000101544|ENST00000262198|ADNP2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	526.325879	1050.63721	-0.40258	-0.00021189	-1.6221	-0.00085377	-2.0247	-0.0010657	526.3249001404155	63.36	0.63488	63.388	63.096	63.731	0.027142	0.061925	0.00032501	NaN	52.299	45	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79282	+		37003	17288	24580	24590							0.11391262975757854
MPLKPLAA	8	Unmodified	_MPLKPLAA_					0	0	0			REV__ENSG00000175073|ENST00000310421|VCPIP1	REV__ENSG00000175073|ENST00000310421|VCPIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.75604248046875	2	420.754224	839.493896	2.8224	0.0011875	-0.38051	-0.0001601	2.4419	0.0010274	420.75391516461383	21.105	1.6401	21.041	20.066	21.706	-0.064058					103	72	2	0	0	0	0.82464	1	576	576		21.702	4.9974	1	85377	+		37004	22036	24581	24591	42081	42081					0.06772835864671833
MPLSLDGTVGP	11	Unmodified	_MPLSLDGTVGP_					0	0	0			REV__ENST00000529299.2_1_1:110170417-110171118:+|nuORF	REV__ENST00000529299.2_1_1:110170417-110171118:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.8557739257812	2	543.778625	1085.5427	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.988	1	15.501	15.001	16.001	-0.48718								0	0	0	0.56276	1	73	73		49.442	12.282	1		+		37005	28265	24582	24592	42082	42082					0.003346596431129001
MPLVLVSVM	9	Unmodified	_MPLVLVSVM_					0	0	0			REV__ENSG00000178394|ENST00000323865|HTR1A	REV__ENSG00000178394|ENST00000323865|HTR1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.78021240234375	2	494.782124	987.549696	-0.074951	-3.7084E-05	-3.3796	-0.0016722	-3.4546	-0.0017093	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.76402	1	8623	8623		35.201	1.0282	1	651380	+		37006	22275	24583	24593	42083	42083					0.05542300989998239
MPNGLVQSQTA	11	Unmodified	_MPNGLVQSQTA_					0	0	0			REV__nc|ENSG00000122515|Q8NF64-2|ZMIZ2	REV__nc|ENSG00000122515|Q8NF64-2|ZMIZ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.29052734375	2	573.284605	1144.55466	-0.09489	-5.4399E-05	4.1677	0.0023893	4.0728	0.0023349	573.2870345413025	30.252	1.1402	30.205	29.551	30.692	-0.047064					39	26	3	0	0	0	0.69931	1	1653	1653		31.634	4.9414	1	89668	+		37007	18502	24584	24594	42084	42084					-0.011837236136898355
MPNVKVAVF	9	Unmodified	_MPNVKVAVF_					0	0	0		ENSG00000198563|ENST00000396172|DDX39B;nc|ENSG00000198563|Q13838-2|DDX39B;ENST00000481456.1_1_6:31503008-31508408:-|nuORF	ENSG00000198563|ENST00000396172|DDX39B	ENSG00000198563|ENST00000396172|DDX39B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.7828063964844	2	502.783513	1003.55247	0.41642	0.00020937	0.6001	0.00030172	1.0165	0.00051109	502.7836200332285	62.431	0.60651	62.986	62.603	63.209	0.55449					36	13	4	0	0	0	0.22631	1	6705	6705		71.296	21.271	1	654000			37008	8288	24585	24595	42085	42085					0.05083892439165538
MPNVKVAVF	9	Unmodified	_MPNVKVAVF_					0	0	0		ENSG00000198563|ENST00000396172|DDX39B;nc|ENSG00000198563|Q13838-2|DDX39B;ENST00000481456.1_1_6:31503008-31508408:-|nuORF	ENSG00000198563|ENST00000396172|DDX39B	ENSG00000198563|ENST00000396172|DDX39B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	502.783513	1003.55247	-1.1455	-0.00057595	1.8346	0.0009224	0.68908	0.00034646	502.7843326126151	62.659	0.6076	63.047	62.534	63.142	0.3878	0.030742	0.00054246	NaN	71.296	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	528090			37009	8288	24585	24595							0.05083892439165538
MPPKLRLKRR	10	Unmodified	_MPPKLRLKRR_					0	0	0		ENSG00000117036|ENST00000368192|ETV3	ENSG00000117036|ENST00000368192|ETV3	ENSG00000117036|ENST00000368192|ETV3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5977783203125	3	432.279931	1293.81796	2.7179	0.0011749	1.9386	0.00083801	4.6565	0.0020129	432.2792062798744	106.43	0.91377	106.4	106.1	107.01	-0.035889					35	20	3	0	0	0	0.37624	1	11841	11841		14.694	8.3728	1	88397			37010	2962	24586	24596	42086	42086					0.18280781352450504
MPPLIQKR	8	Unmodified	_MPPLIQKR_					0	0	0		ENST00000436471.2_1_17:20385129-20386047:-|nuORF	ENST00000436471.2_1_17:20385129-20386047:-|nuORF	ENST00000436471.2_1_17:20385129-20386047:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958984375	2	491.796955	981.579357	-0.344	-0.00016918	-1.9041	-0.00093642	-2.2481	-0.0011056	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.86288	1	4025	4025		26.796	2.5934	1	412030			37011	11722	24587	24597	42087	42087					0.08783001050346684
MPPLPGLPGT	10	Unmodified	_MPPLPGLPGT_					0	0	0			REV__ENSG00000176986|ENST00000345254|SEC24C	REV__ENSG00000176986|ENST00000345254|SEC24C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.2672424316406	2	490.267696	978.520839	-0.081951	-4.0178E-05	1.4073	0.00068996	1.3254	0.00064978	490.2683992201926	84.078	3.5378	84.144	83.169	86.707	0.06678					153	81	2	0	0	0	0.71042	1	8437	8437		44.117	1.6423	1	271000	+		37012	22168	24588	24598	42088	42088					0.03071899685221524
MPPLPGLPGT	10	Unmodified	_MPPLPGLPGT_					0	0	0			REV__ENSG00000176986|ENST00000345254|SEC24C	REV__ENSG00000176986|ENST00000345254|SEC24C	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	490.267696	978.520839	-0.74458	-0.00036505	1.9884	0.00097483	1.2438	0.00060978	490.26870730971814	83.769	2.7786	84.205	83.622	86.401	0.43538	-0.051387	0.0003929	NaN	44.117	101	67	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224030	+		37013	22168	24588	24598							0.03071899685221524
MPPLPGLPGT	10	Unmodified	_MPPLPGLPGT_					0	0	0			REV__ENSG00000176986|ENST00000345254|SEC24C	REV__ENSG00000176986|ENST00000345254|SEC24C	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	490.267696	978.520839	-0.21372	-0.00010478	1.6961	0.00083155	1.4824	0.00072677	490.26855582773686	84.012	2.9747	84.467	83.642	86.616	0.45555	0.21111	0.00010635	NaN	44.117	108	72	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	255070	+		37014	22168	24588	24598							0.03071899685221524
MPPMPGGSLV	10	Unmodified	_MPPMPGGSLV_					0	0	0		ENST00000540216.5_1_19:13862437-13862467:+|nuORF	ENST00000540216.5_1_19:13862437-13862467:+|nuORF	ENST00000540216.5_1_19:13862437-13862467:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.24615478515625	2	493.245906	984.477259	0.44489	0.00021944	0.075805	3.7391E-05	0.5207	0.00025683	493.24582366684365	27.777	1.5267	27.813	27.395	28.922	0.03607					129	51	4	0	0	0	0.86589	1	1353	1353		29.15	1.2673	1	868330			37015	13490	24589	24599	42089	42089					-0.015600330835695786
MPPRWIVG	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MPPRWIVG_					1	0	0		ENST00000573703.1_1_16:24930831-24930861:-|nuORF	ENST00000573703.1_1_16:24930831-24930861:-|nuORF	ENST00000573703.1_1_16:24930831-24930861:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.2697448730469	2	499.26803	996.521507	0.063777	3.1842E-05	2.3348	0.0011657	2.3986	0.0011976	499.2690985885145	20.416	0.67497	19.786	19.443	20.118	-0.6296					31	14	3	0	0	0	0.93529	1	657	657		52.299	8.1824	1	347620			37016	14024	24590	24600	42090	42090					0.023107391249141074
MPQGGGQHY	9	Unmodified	_MPQGGGQHY_					0	0	0		nc|ENSG00000141380|Q15532-2|SS18;ENSG00000141380|ENST00000415083|SS18	nc|ENSG00000141380|Q15532-2|SS18	nc|ENSG00000141380|Q15532-2|SS18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7109375	2	487.711076	973.4076	-0.62518	-0.00030491	0.83399	0.00040675	0.20881	0.00010184	487.71130956262834	27.518	0.83505	27.342	27.016	27.851	-0.17559					38	18	3	0	0	0	0.25483	1	1591	1591		68.787	14.022	1	714980			37017	4494	24591	24601	42091	42091					-0.08016775707972101
MPQGGGQHY	9	Unmodified	_MPQGGGQHY_					0	0	0		nc|ENSG00000141380|Q15532-2|SS18;ENSG00000141380|ENST00000415083|SS18	nc|ENSG00000141380|Q15532-2|SS18	nc|ENSG00000141380|Q15532-2|SS18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7112731933594	2	487.711076	973.4076	1.2508	0.00061004	-1.0493	-0.00051177	0.20149	9.8271E-05	487.7104095474133	27.518	1.031	27.264	26.945	27.976	-0.25465					45	23	3	0	0	0	0.51307	1	1607	1607		51.335	5.3835	1	747210			37018	4494	24591	24601	42092	42092					-0.08016775707972101
MPSCFIPF	8	Unmodified	_MPSCFIPF_					0	0	0		chr19:46120320-46123886|33|109.58|0.18|9.23|-|1|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120320|None,IGFL3|2;chr19:46120307-46123886|31|103.61|0.08|10.33|-|0|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120307|None,IGFL3|2	chr19:46120320-46123886|33|109.58|0.18|9.23|-|1|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120320|None,IGFL3|2	chr19:46120320-46123886|33|109.58|0.18|9.23|-|1|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120320|None,IGFL3|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.21551513671875	2	471.216617	940.418682	-1.2519	-0.00058991	-0.97513	-0.0004595	-2.227	-0.0010494	471.2160650610449	33.606	0.51555	33.608	33.403	33.918	0.0026054					19	11	2	0	0	0	0.86288	1	1991	1991		26.796	0.10319	1	58136			37019	281	24592	24602	42093	42093					-0.05391089658041892
MPTKVRAIRH	10	Unmodified	_MPTKVRAIRH_					0	0	0		ENST00000521980.1_1_8:124096343-124109714:+|nuORF;ENST00000518099.5_1_8:124085009-124113262:+|nuORF;ENST00000524307.5_1_8:124089445-124141439:+|nuORF;nc|ENSG00000156787|Q96DN5-3|TBC1D31;nc|ENSG00000156787|Q96DN5-2|TBC1D31;ENSG00000156787|ENST00000287380|TBC1D31	ENST00000521980.1_1_8:124096343-124109714:+|nuORF	ENST00000521980.1_1_8:124096343-124109714:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.5738830566406	3	403.573003	1207.69718	0.45838	0.00018499	4.0129	0.0016195	4.4712	0.0018045	403.5745157078723	82.548	1.6567	82.482	81.51	83.166	-0.066185					95	38	3	0	0	0	0.66675	1	8429	8429		46.457	3.5925	1	406480			37020	5392	24593	24603	42094	42094					0.10163953638993917
MPTLATLLIW	10	Unmodified	_MPTLATLLIW_					0	0	0		ENST00000423427.1_2_3:173322113-173322197:+|nuORF	ENST00000423427.1_2_3:173322113-173322197:+|nuORF	ENST00000423427.1_2_3:173322113-173322197:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.8311157226562	2	579.833203	1157.65185	0.82643	0.00047919	-3.7329	-0.0021645	-2.9065	-0.0016853	579.8308690691199	82.179	0.92126	82.116	81.758	82.679	-0.062935					55	20	4	0	0	0	0.86589	1	8297	8297		29.15	1.0681	1	354550			37021	11498	24594	24604	42095	42095					0.07933290333266996
MPTQTARVM	9	Oxidation (M)	_MPTQTARVM(Oxidation (M))_		MPTQTARVM(1)		M(-57)PTQTARVM(57)	0	0	1		ENST00000581294.2_1_17:25410653-25410737:-|nuORF	ENST00000581294.2_1_17:25410653-25410737:-|nuORF	ENST00000581294.2_1_17:25410653-25410737:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.75927734375	2	525.757169	1049.49979	0.28993	0.00015243	3.0482	0.0016026	3.3381	0.001755	525.7592376198838	83.156	1.1199	83.611	83.112	84.232	0.45555					86	26	5	0	0	0	0.30689	1	9666	9666		64.207	12.872	2	697920			37022	14105	24595	24605	42096	42096		207			-0.022984336859735777
MPVDPNEPTY	10	Oxidation (M)	_M(Oxidation (M))PVDPNEPTY_		M(1)PVDPNEPTY		M(80)PVDPNEPTY	0	0	1		ENST00000484795.5_1_12:6760363-6761595:-|nuORF;ENST00000472002.5_1_12:6760363-6762075:-|nuORF;ENST00000488381.5_1_12:6760363-6764813:-|nuORF;nc|ENSG00000111653|Q9UNL4-3|ING4;nc|ENSG00000168395|Q8WYH8-2|ING5;ENSG00000168395|ENST00000313552|ING5;nc|ENSG00000111653|Q9UNL4-4|ING4;nc|ENSG00000111653|Q9UNL4-7|ING4;nc|ENSG00000111653|Q9UNL4-5|ING4;nc|ENSG00000111653|Q9UNL4-6|ING4;ENSG00000111653|ENST00000341550|ING4;nc|ENSG00000111653|Q9UNL4|ING4	ENST00000484795.5_1_12:6760363-6761595:-|nuORF	ENST00000484795.5_1_12:6760363-6761595:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.7544555664062	2	589.755346	1177.49614	-0.58294	-0.00034379	1.2032	0.00070956	0.62021	0.00036577	589.756006378897	52.166	2.6883	52.589	51.107	53.795	0.42348					116	64	2	0	0	0	0.23822	1	5209	5209		79.713	24.936	1	1154100			37023	2596	24596	24606	42097	42097		55			-0.08550824978829041
MPVDPNEPTY	10	Unmodified	_MPVDPNEPTY_					0	0	0		ENST00000484795.5_1_12:6760363-6761595:-|nuORF;ENST00000472002.5_1_12:6760363-6762075:-|nuORF;ENST00000488381.5_1_12:6760363-6764813:-|nuORF;nc|ENSG00000111653|Q9UNL4-3|ING4;nc|ENSG00000168395|Q8WYH8-2|ING5;ENSG00000168395|ENST00000313552|ING5;nc|ENSG00000111653|Q9UNL4-4|ING4;nc|ENSG00000111653|Q9UNL4-7|ING4;nc|ENSG00000111653|Q9UNL4-5|ING4;nc|ENSG00000111653|Q9UNL4-6|ING4;ENSG00000111653|ENST00000341550|ING4;nc|ENSG00000111653|Q9UNL4|ING4	ENST00000484795.5_1_12:6760363-6761595:-|nuORF	ENST00000484795.5_1_12:6760363-6761595:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	581.7579345703125	2	581.757889	1161.50123	-1.4907	-0.00086725	1.7611	0.0010245	0.27034	0.00015727	581.7587710307082	56.593	1.7564	56.989	56.523	58.279	0.39672					97	41	4	0	0	0	1.088E-16	8	5839	5818;5827;5839;5851;5863;5875;5887;5901		168.26	91.484	1	7705200			37024	2596	24596	24607	42098;42099;42100;42101;42102;42103;42104;42105	42100					-0.07306521116197473
MPVDPNEPTY	10	Unmodified	_MPVDPNEPTY_					0	0	0		ENST00000484795.5_1_12:6760363-6761595:-|nuORF;ENST00000472002.5_1_12:6760363-6762075:-|nuORF;ENST00000488381.5_1_12:6760363-6764813:-|nuORF;nc|ENSG00000111653|Q9UNL4-3|ING4;nc|ENSG00000168395|Q8WYH8-2|ING5;ENSG00000168395|ENST00000313552|ING5;nc|ENSG00000111653|Q9UNL4-4|ING4;nc|ENSG00000111653|Q9UNL4-7|ING4;nc|ENSG00000111653|Q9UNL4-5|ING4;nc|ENSG00000111653|Q9UNL4-6|ING4;ENSG00000111653|ENST00000341550|ING4;nc|ENSG00000111653|Q9UNL4|ING4	ENST00000484795.5_1_12:6760363-6761595:-|nuORF	ENST00000484795.5_1_12:6760363-6761595:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.758056640625	2	581.757889	1161.50123	-0.056077	-3.2623E-05	0.31415	0.00018276	0.25807	0.00015013	581.7579371182112	56.459	1.4283	57.019	56.541	57.97	0.55953					89	31	5	0	0	0	1.7249E-70	8	5862	5816;5826;5838;5850;5862;5874;5886;5898		219.56	131.81	1	8603500			37025	2596	24596	24607	42106;42107;42108;42109;42110;42111;42112;42113	42110					-0.07306521116197473
MPVGPDAILRY	11	Unmodified	_MPVGPDAILRY_					0	0	0		nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379|BAG6;ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-4|BAG6	nc|ENSG00000204463|P46379-5|BAG6	nc|ENSG00000204463|P46379-5|BAG6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	616.3291015625	2	616.328816	1230.64308	-0.22297	-0.00013743	0.20011	0.00012333	-0.022869	-1.4095E-05	616.328798451483	71.256	1.5823	71.64	70.999	72.582	0.38449					110	37	4	0	0	0	0.00014241	5	7925	7890;7901;7913;7925;7938		131.62	75.828	1	4137500			37026	8445	24597	24608	42114;42115;42116;42117;42118	42117					0.03698316696772963
MPVGPDAILRY	11	Unmodified	_MPVGPDAILRY_					0	0	0		nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379|BAG6;ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-4|BAG6	nc|ENSG00000204463|P46379-5|BAG6	nc|ENSG00000204463|P46379-5|BAG6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	616.3289794921875	2	616.328816	1230.64308	0.3501	0.00021577	-0.27738	-0.00017096	0.072716	4.4817E-05	616.328534631759	71.148	1.5699	71.696	71.2	72.77	0.54756					102	37	4	0	0	0	1.1106E-08	5	7946	7912;7923;7934;7946;7958		143.37	74.587	1	4289800			37027	8445	24597	24608	42119;42120;42121;42122;42123	42122					0.03698316696772963
MPVGPDAILRY	11	Oxidation (M)	_M(Oxidation (M))PVGPDAILRY_		M(1)PVGPDAILRY		M(62)PVGPDAILRY	0	0	1		nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379|BAG6;ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-4|BAG6	nc|ENSG00000204463|P46379-5|BAG6	nc|ENSG00000204463|P46379-5|BAG6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	624.3308715820312	2	624.326273	1246.63799	0.93813	0.0005857	-1.8156	-0.0011335	-0.87751	-0.00054785	624.3244602756348	63.863	0.72694	64.418	64.046	64.773	0.5545					32	16	3	0	0	0	0.37012	3	6940	6906;6929;6940		61.691	13.944	1	596860			37028	8445	24597	24609	42124;42125;42126	42126		145			0.024540128341413947
MPVGQRQCY	9	Unmodified	_MPVGQRQCY_					0	0	0			REV__nc|ENSG00000116030|P63165-2|SUMO1	REV__nc|ENSG00000116030|P63165-2|SUMO1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.3588256835938	2	541.249511	1080.48447	-0.022262	-1.2049E-05	0.40317	0.00021822	0.38091	0.00020617	541.7517284869666	36.835	0.17868	36.782	36.649	36.828	-0.053558					5	3	2	0	0	0	0.20789	1	2471	2471		23.042	0	1	8295	+		37029	18172	24598	24610	42127	42127					-0.05255300483167957
MPVRGPDVEAY	11	Unmodified	_MPVRGPDVEAY_					0	0	0		nc|ENSG00000175348|Q9NQ34-2|TMEM9B;ENSG00000175348|ENST00000534025|TMEM9B	nc|ENSG00000175348|Q9NQ34-2|TMEM9B	nc|ENSG00000175348|Q9NQ34-2|TMEM9B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	617.3014526367188	2	617.300255	1232.58596	0.62173	0.0003838	-0.20826	-0.00012856	0.41347	0.00025524	617.2996888641097	50.751	1.111	51.197	50.722	51.833	0.44625					62	26	4	0	0	0	0.13035	4	4992	4992;5004;5016;5029		85.862	41.745	1	1238000			37030	7011	24599	24611	42128;42129;42130;42131	42128					-0.021031505795917838
MPVRGPDVEAY	11	Unmodified	_MPVRGPDVEAY_					0	0	0		nc|ENSG00000175348|Q9NQ34-2|TMEM9B;ENSG00000175348|ENST00000534025|TMEM9B	nc|ENSG00000175348|Q9NQ34-2|TMEM9B	nc|ENSG00000175348|Q9NQ34-2|TMEM9B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	617.3008422851562	2	617.300255	1232.58596	1.4533	0.00089712	-0.84073	-0.00051899	0.61257	0.00037814	617.2994725097743	50.547	0.6516	51.298	50.921	51.572	0.75174					42	15	4	0	0	0	0.3308	4	4985	4985;4995;5007;5018		66.962	29.454	1	1584900			37031	7011	24599	24611	42132;42133;42134;42135	42132					-0.021031505795917838
MPVRVVTEPT	10	Unmodified	_MPVRVVTEPT_					0	0	0			REV__CON__Q9N2I2	REV__CON__Q9N2I2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.8097534179688	2	564.807716	1127.60088	3.0107	0.0017004	1.8168	0.0010261	4.8274	0.0027266	564.8086416193407	110	1.6919	109.97	109.64	111.33	-0.027641					152	59	3	0	0	0	0.64457	1	12158	12158		47.657	1.7054	1	4099500	+	+	37032	16032	24600	24612	42136	42136					0.04218341288378724
MPWICVPR	8	Unmodified	_MPWICVPR_					0	0	0		ENST00000459764.1_1_10:102747580-102749466:+|nuORF	ENST00000459764.1_1_10:102747580-102749466:+|nuORF	ENST00000459764.1_1_10:102747580-102749466:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2903747558594	2	501.256608	1000.49866	0.67946	0.00034058	-2.3859	-0.001196	-1.7065	-0.00085539	501.25519014561456	86.969	0.21204	87.118	86.952	87.164	0.14956					5	4	2	0	0	0	0.4196	1	8569	8569		33.516	0	1	25710			37033	11993	24601	24613	42137	42137					-0.0015660326420174897
MPWKKTPVF	9	Unmodified	_MPWKKTPVF_					0	0	0			REV__chr8:66948164-66961086|13|14.54|0.04|8.6|-|0|TCF24,None|1	REV__chr8:66948164-66961086|13|14.54|0.04|8.6|-|0|TCF24,None|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3300170898438	2	567.312438	1132.61032	-1.2	-0.0006808	-3.3502	-0.0019006	-4.5502	-0.0025814	567.308815795894	92.636	0.85894	92.706	92.025	92.884	0.06987					40	19	3	0	0	0	0.20789	1	9561	9561		35.618	0.46626	1	175730	+		37034	15924	24602	24614	42138	42138					0.049321543645874044
MQALEMAALAP	11	Unmodified	_MQALEMAALAP_					0	0	0			REV__ENSG00000144028|ENST00000323853|SNRNP200	REV__ENSG00000144028|ENST00000323853|SNRNP200	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.7508544921875	2	573.288302	1144.56205	-0.87402	-0.00050106	4.1882	0.002401	3.3142	0.0019	573.2918447021432	56.721	0.21563	57.118	57.029	57.244	0.39672					6	4	2	0	0	0	0.16822	1	5855	5855		44.377	7.2181	1	143930	+		37035	19864	24603	24615	42139	42139					-0.004447073376240951
MQCQVCYD	8	Unmodified	_MQCQVCYD_					0	0	0		ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8;ENSG00000164941|ENST00000523731|INTS8	ENST00000523321.5_1_8:95835614-95871872:+|nuORF	ENST00000523321.5_1_8:95835614-95871872:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7918701171875	2	495.179906	988.345259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.902	1	58.871	58.371	59.371	-0.030888								0	0	0	0.29755	1	5495	5495		24.203	2.2429	1				37036	6027	24604	24616	42140	42140					-0.14938006162844886
MQFPLLSIY	9	Unmodified	_MQFPLLSIY_					0	0	0			REV__ENST00000412729.1_22:16419404-16436476:-|nuORF	REV__ENST00000412729.1_22:16419404-16436476:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.303466796875	2	556.296453	1110.57835	-0.91183	-0.00050725	4.1847	0.0023279	3.2728	0.0018207	556.2983390828923	68.987	0.50521	69.014	68.76	69.265	0.02636					37	21	2	0	0	0	0.51307	1	6534	6534		51.335	10.763	1	110980	+		37037	26387	24605	24617	42141	42141					0.027487418907867323
MQGLILAPA	9	Unmodified	_MQGLILAPA_					0	0	0		ENST00000374280.3_1_1:26348499-26348697:+|nuORF	ENST00000374280.3_1_1:26348499-26348697:+|nuORF	ENST00000374280.3_1_1:26348499-26348697:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26177978515625	2	457.262413	912.510274	-0.13162	-6.0186E-05	4.3904	0.0020076	4.2588	0.0019474	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.74721	1	7671	7671		37.159	1.9584	1	1194000			37038	10775	24606	24618	42142	42142					0.05051917030777986
MQGNTPDKPQI	11	Oxidation (M)	_M(Oxidation (M))QGNTPDKPQI_		M(1)QGNTPDKPQI		M(55)QGNTPDKPQI	0	0	1			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	622.8010864257812	2	622.80062	1243.58669	1.2053	0.00075067	4.343	0.0027048	5.5483	0.0034555	622.8032457080375	56.643	0.89481	57.203	56.876	57.771	0.55954					35	20	3	0	0	0	0.45992	1	5881	5881		54.722	9.7001	1	709360	+		37039	17810	24607	24619	42143	42143		257			-0.025363559305560557
MQGNTPDKPQI	11	Oxidation (M)	_M(Oxidation (M))QGNTPDKPQI_					0	0	1			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	622.80062	1243.58669	1.2053	0.00075067	4.343	0.0027048	5.5483	0.0034555	622.8032457080375	56.643	0.89481	57.203	56.876	57.771	0.55954	-0.0040199	-0.00077102	NaN	54.722	35	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	709360	+		37040	17810	24607	24619				257			-0.025363559305560557
MQHLLRRLVF	10	Unmodified	_MQHLLRRLVF_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2730712890625	3	438.260537	1311.75978	-0.1589	-6.964E-05	-0.42341	-0.00018556	-0.58231	-0.0002552	438.2602760332656	106.53	0.12711	106.5	106.39	106.52	-0.025146					4	2	2	0	0	0	0.37624	1	11560	11560		29.17	0	1	35787			37041	8298	24608	24620	42144	42144					0.11637099707195375
MQIGPSEQYK	10	Unmodified	_MQIGPSEQYK_					0	0	0			REV__ENSG00000064703|ENST00000369702|DDX20	REV__ENSG00000064703|ENST00000369702|DDX20	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8088989257812	2	590.786981	1179.55941	0.74469	0.00043995	1.6259	0.00096058	2.3706	0.0014005	591.2885894004314	59.797	0.29821	59.766	59.612	59.91	-0.031731					9	7	2	0	0	0	0.37624	1	5619	5619		82.241	12.613	1	25721	+		37042	16483	24609	24621	42145	42145					-0.023188394709450222
MQIVDELSI	9	Unmodified	_MQIVDELSI_					0	0	0		nc|ENSG00000110422|Q9H422-2|HIPK3;ENSG00000110422|ENST00000303296|HIPK3	nc|ENSG00000110422|Q9H422-2|HIPK3	nc|ENSG00000110422|Q9H422-2|HIPK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2699584960938	2	524.273175	1046.5318	0.068728	3.6032E-05	-3.8279	-0.0020069	-3.7592	-0.0019708	524.2709698918767	75.989	0.87818	76.558	76.184	77.062	0.56836					57	21	4	0	0	0	0.36616	1	8630	8630		60.118	1.3363	1	1616600			37043	2527	24610	24622	42146	42146					0.01039257268826077
MQKPLVPLKTP	11	Unmodified	_MQKPLVPLKTP_					0	0	0		ENST00000471771.5_1_13:28014269-28014434:-|nuORF	ENST00000471771.5_1_13:28014269-28014434:-|nuORF	ENST00000471771.5_1_13:28014269-28014434:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3795166015625	2	626.378309	1250.74206	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.42	1	115.35	114.85	115.85	-0.067703								0	0	0	0.56276	1	12371	12371		30.318	4.7437	1				37044	12247	24611	24623	42147	42147					0.12672339661639853
MQLRKGPNVV	10	Unmodified	_MQLRKGPNVV_					0	0	0		ENSG00000198888|ENST00000361390|MT-ND1	ENSG00000198888|ENST00000361390|MT-ND1	ENSG00000198888|ENST00000361390|MT-ND1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.332763671875	2	571.32915	1140.64375	0.55865	0.00031917	2.5978	0.0014842	3.1565	0.0018034	571.3306168800059	102.04	2.573	102.24	101.51	104.08	0.19484					133	63	4	0	0	0	0.86589	1	10833	10833		29.15	5.6269	1	4021100			37045	8360	24612	24624	42148	42148					0.07905156136484948
MQMVLALSP	9	Unmodified	_MQMVLALSP_					0	0	0		nc|ENSG00000140853|Q86WI3-3|NLRC5;nc|ENSG00000140853|Q86WI3-2|NLRC5;nc|ENSG00000140853|Q86WI3-5|NLRC5;nc|ENSG00000140853|Q86WI3-6|NLRC5;nc|ENSG00000140853|Q86WI3-4|NLRC5;ENSG00000140853|ENST00000688547|NLRC5	nc|ENSG00000140853|Q86WI3-3|NLRC5	nc|ENSG00000140853|Q86WI3-3|NLRC5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2579345703125	2	495.261556	988.508559	-2.6631	-0.0013189	-2.2816	-0.00113	-4.9447	-0.0024489	495.26028573461133	40.858	1.9733	41.25	40.867	42.841	0.39209					105	53	3	0	0	0	0.51307	1	3579	3579		51.335	1.8939	1	8396000			37046	4460	24613	24625	42149	42149					0.01384539950515773
MQPLLLMQ	8	Oxidation (M)	_MQPLLLM(Oxidation (M))Q_		MQPLLLM(1)Q		M(-49)QPLLLM(49)Q	0	0	1		ENSG00000282815|ENST00000695840|TEX13C	ENSG00000282815|ENST00000695840|TEX13C	ENSG00000282815|ENST00000695840|TEX13C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.26019287109375	2	495.261556	988.508559	1.1508	0.00056992	-4.2048	-0.0020825	-3.054	-0.0015125	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.88944	1	2619	2619		57.811	10.154	2	3842700			37047	9054	24614	24626	42150	42150		160			0.01384539950515773
MQQWPGDSH	9	Unmodified	_MQQWPGDSH_					0	0	0		ENST00000448521.5_1_7:44100550-44100796:+|nuORF	ENST00000448521.5_1_7:44100550-44100796:+|nuORF	ENST00000448521.5_1_7:44100550-44100796:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2285766601562	2	543.227091	1084.43963	-0.5278	-0.00028671	3.0801	0.0016732	2.5523	0.0013865	543.2285382273271	55.936	0.69196	56.337	56.033	56.725	0.40102					37	18	3	0	0	0	0.77244	1	5752	5752		32.812	1.2826	1	3264800			37048	11859	24615	24627	42151	42151					-0.09921408024820266
MQRQQTKSSF	10	Unmodified	_MQRQQTKSSF_					0	0	0			REV__ENST00000489193.1_1_3:86062505-86063063:+|nuORF	REV__ENST00000489193.1_1_3:86062505-86063063:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.8094482421875	2	620.808779	1239.60301	0.1525	9.4673E-05	-0.82284	-0.00051083	-0.67035	-0.00041616	620.8084857499598	59.522	1.8774	60.075	59.343	61.22	0.55323					109	49	4	0	0	0	0.8545	1	6250	6250		36.447	0.12911	1	3699000	+		37049	27617	24616	24628	42152	42152					-0.007212299738057482
MQTSEAWVF	9	Unmodified	_MQTSEAWVF_					0	0	0		ENSG00000188641|ENST00000370192|DPYD	ENSG00000188641|ENST00000370192|DPYD	ENSG00000188641|ENST00000370192|DPYD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.7479858398438	2	549.749867	1097.48518	0.27504	0.0001512	-3.7432	-0.0020578	-3.4682	-0.0019066	549.7476357023818	36.848	0.64654	36.947	36.637	37.283	0.099277					36	16	3	0	0	0	0.76255	1	2061	2061		35.618	1.4457	1	640410			37050	7944	24617	24629	42153	42153					-0.059661825624516496
MQVAPPKVQSP	11	Unmodified	_MQVAPPKVQSP_					0	0	0			REV__ENSG00000133958|ENST00000695012|UNC79	REV__ENSG00000133958|ENST00000695012|UNC79	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	591.3185424804688	2	591.320991	1180.62743	-0.64142	-0.00037929	-1.6588	-0.0009809	-2.3003	-0.0013602	591.3201240825498	66.908	0.89341	66.924	66.652	67.546	0.016205					64	40	2	0	0	0	0.60687	1	6279	6279		43.651	2.8726	1	235670	+		37051	19104	24618	24630	42154	42154					0.044340301797319626
MQVARSLFTGA	11	Unmodified	_MQVARSLFTGA_					0	0	0			REV__ENST00000535010.5_1_1:87170570-87185198:+|nuORF	REV__ENST00000535010.5_1_1:87170570-87185198:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8089599609375	2	590.81079	1179.60703	0.75906	0.00044846	-4.0836	-0.0024126	-3.3245	-0.0019642	590.8083889638864	59.878	1.5877	59.846	59.4	60.988	-0.031727					100	43	3	0	0	0	0.14238	1	5598	5598		82.75	0.50997	1	6527800	+		37052	28375	24619	24631	42155	42155					0.02440859519924743
MQVARSLFTGA	11	Unmodified	_MQVARSLFTGA_					0	0	0			REV__ENST00000535010.5_1_1:87170570-87185198:+|nuORF	REV__ENST00000535010.5_1_1:87170570-87185198:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8095092773438	2	590.81079	1179.60703	-0.32322	-0.00019096	-2.5449	-0.0015035	-2.8681	-0.0016945	590.8092533729065	59.928	1.5542	59.928	59.528	61.083	0.00051117					123	53	3	0	0	0	0.28254	1	5153	5153		75.043	0.78827	1	4758100	+		37053	28375	24619	24631	42156	42156					0.02440859519924743
MRAEKGAH	8	Unmodified	_MRAEKGAH_					0	0	0		ENST00000425916.4_1_10:77168114-77168228:+|nuORF	ENST00000425916.4_1_10:77168114-77168228:+|nuORF	ENST00000425916.4_1_10:77168114-77168228:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.26055908203125	2	450.229436	898.44432	0.044551	2.0058E-05	-0.76212	-0.00034313	-0.71757	-0.00032307	450.2289216975389	66.042	0.3744	66.595	66.486	66.861	0.5526					10	9	2	0	0	0	0.4196	1	7213	7213		60.294	27.482	1	39567			37054	11540	24620	24632	42157	42157					-0.008964790914092191
MRDWEDGESPA	11	Unmodified	_MRDWEDGESPA_					0	0	0			REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	646.766845703125	2	646.764234	1291.51392	0.65702	0.00042494	2.2807	0.0014751	2.9378	0.0019	646.7654771687639	22.302	0.75695	21.884	21.564	22.321	-0.41879					36	16	3	0	0	0	0.72739	1	912	912		27.047	0.3544	1	217980	+		37055	27027	24621	24633	42158	42158					-0.12018109723953785
MRELIQTFKGH	11	Unmodified	_MRELIQTFKGH_					0	0	0		nc|ENSG00000152672|Q8N1N0-2|CLEC4F;ENSG00000152672|ENST00000272367|CLEC4F	nc|ENSG00000152672|Q8N1N0-2|CLEC4F	nc|ENSG00000152672|Q8N1N0-2|CLEC4F	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.7657165527344	3	453.911573	1358.71289	-0.11038	-5.0102E-05	-0.52829	-0.0002398	-0.63867	-0.0002899	453.91116829659256	41.463	0.11393	41.418	41.358	41.472	-0.045467					4	2	2	0	0	0	0.17289	1	2708	2708		41.08	20.765	1	31653			37056	5191	24622	24634	42159	42159					0.04788195365381398
MRFILILD	8	Unmodified	_MRFILILD_					0	0	0		ENSG00000257743|ENST00000477922|MGAM2;ENST00000496337.1_1_7:141870985-141908039:+|nuORF	ENSG00000257743|ENST00000477922|MGAM2	ENSG00000257743|ENST00000477922|MGAM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8145446777344	2	510.799163	1019.58377	0.49355	0.0002521	1.9703	0.0010064	2.4638	0.0012585	510.7999982843591	79.194	0.5963	79.743	79.403	79.999	0.54945					17	13	2	0	0	0	0.4196	1	9049	9049		27.882	0	1	61578			37057	8908	24623	24635	42160	42160					0.07476465473268945
MRGGRQAALRE	11	Unmodified	_MRGGRQAALRE_					0	0	0		ENSG00000173013|ENST00000310085|CCDC96	ENSG00000173013|ENST00000310085|CCDC96	ENSG00000173013|ENST00000310085|CCDC96	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.837646484375	2	622.835662	1243.65677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.24	1	111.28	110.78	111.78	0.041832								0	0	0	0.56276	1	13462	13462		19.263	0.15916	1				37058	6817	24624	24636	42161	42161					0.044689872485378146
MRHILALL	8	Oxidation (M)	_M(Oxidation (M))RHILALL_		M(1)RHILALL		M(45)RHILALL	0	0	1			REV__nc|ENSG00000163714|O15042-3|U2SURP	REV__nc|ENSG00000163714|O15042-3|U2SURP	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7969055175781	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.033	1	64.032	63.532	64.532	-0.00078583								0	0	0	0.30609	1	5966	5966		44.531	7.5026	1		+		37059	29986	24625	24637	42162	42162		438			0.08783001050346684
MRIDLRFFLIT	11	Unmodified	_MRIDLRFFLIT_					0	0	0			REV__ENST00000528042.1_1_11:57505416-57505545:+|nuORF	REV__ENST00000528042.1_1_11:57505416-57505545:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.60784912109375	3	475.607602	1423.80098	0.65792	0.00031291	1.4025	0.00066702	2.0604	0.00097993	475.60800202742337	50.088	0.53911	50.535	50.266	50.805	0.44761					31	12	3	0	0	0	0.74771	1	4904	4904		22.562	0.78116	1	1184700	+		37060	23622	24626	24638	42163	42163					0.10602815956008271
MRIKQPRQKK	10	Unmodified	_MRIKQPRQKK_					0	0	0			REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.27252197265625	3	438.271324	1311.79214	2.0592	0.0009025	1.7651	0.00077361	3.8244	0.0016761	438.27198607190746	106.29	0.8153	106.33	105.9	106.72	0.03688					74	18	5	0	0	0	0.86698	1	11607	11607		28.081	1.3318	1	4519600	+		37061	21784	24627	24639	42164	42164					0.14871887110166426
MRILHAELQ	9	Unmodified	_MRILHAELQ_					0	0	0		ENSG00000171853|ENST00000324266|TRAPPC12;ENST00000462983.5_1_2:3447569-3464471:+|nuORF;ENST00000479897.5_1_2:3447569-3469487:+|nuORF;ENST00000469147.5_1_2:3428415-3471239:+|nuORF	ENSG00000171853|ENST00000324266|TRAPPC12	ENSG00000171853|ENST00000324266|TRAPPC12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.8048706054688	2	555.808051	1109.60155	0.48387	0.00026894	-3.4024	-0.0018911	-2.9186	-0.0016222	555.8060936084939	59.421	0.71672	59.535	59.153	59.87	0.11396					34	20	2	0	0	0	0.30689	1	5098	5098		64.207	3.2353	1	296800			37062	6719	24628	24640	42165	42165					0.05113180728108091
MRKDVYSEIT	10	Unmodified	_MRKDVYSEIT_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.314453125	2	621.313363	1240.61217	-0.62331	-0.00038727	1.3377	0.00083114	0.71441	0.00044387	621.3140085474115	68.614	0.80863	68.647	68.364	69.173	0.033005					72	32	3	0	0	0	0.64457	1	6582	6582		47.657	3.2801	1	488350	+		37063	16310	24629	24641	42166	42166					0.001491185918894189
MRKERWWETYF	11	Unmodified	_MRKERWWETYF_					0	0	0			REV__ENST00000292599.3_1_5:179203171-179203312:+|nuORF	REV__ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.5975952148438	3	544.597766	1630.77147	-1.6855	-0.00091793	1.5571	0.00084799	-0.12843	-6.9944E-05	544.5986714358974	17.944	0.39056	17.944	17.733	18.123	0					43	17	4	0	0	0	0.88916	1	254	254		3.4087	0	1	88736	+		37064	24681	24630	24642	42167	42167					-0.018687480601329298
MRKERWWETYF	11	Unmodified	_MRKERWWETYF_					0	0	0			REV__ENST00000292599.3_1_5:179203171-179203312:+|nuORF	REV__ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.5972290039062	3	544.597766	1630.77147	-1.6855	-0.00091794	1.4559	0.00079286	-0.22968	-0.00012508	544.5984134081739	18.891	0.86393	18.891	18.488	19.351	0					62	29	4	0	0	0	0.84494	2	358	342;358		6.3209	3.1096	1	272400	+		37065	24681	24630	24642	42168;42169	42169					-0.018687480601329298
MRKERWWETYF	11	Unmodified	_MRKERWWETYF_					0	0	0			REV__ENST00000292599.3_1_5:179203171-179203312:+|nuORF	REV__ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.5975952148438	3	544.597766	1630.77147	1.0053	0.00054747	-1.2528	-0.00068225	-0.24748	-0.00013478	544.597079666646	18.141	0.56901	18.062	17.802	18.371	-0.078943					50	23	3	0	0	0	0.80813	1	296	296		9.6461	3.9474	1	74867	+		37066	24681	24630	24642	42170	42170					-0.018687480601329298
MRKERWWETYF	11	Unmodified	_MRKERWWETYF_					0	0	0			REV__ENST00000292599.3_1_5:179203171-179203312:+|nuORF	REV__ENST00000292599.3_1_5:179203171-179203312:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.5977172851562	3	544.597766	1630.77147	-0.16088	-8.7613E-05	-0.02171	-1.1823E-05	-0.18259	-9.9436E-05	544.597658970736	19.993	1.36	19.364	18.801	20.161	-0.62961					69	29	5	0	0	0	0.88916	1	616	616		3.4087	0	1	1084200	+		37067	24681	24630	24642	42171	42171					-0.018687480601329298
MRKRRLREQFW	11	Unmodified	_MRKRRLREQFW_					0	0	0		nc|ENSG00000050628|P43115-12|PTGER3	nc|ENSG00000050628|P43115-12|PTGER3	nc|ENSG00000050628|P43115-12|PTGER3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.7051086425781	4	402.228131	1604.88342	2.0677	0.00083167	0.079159	3.184E-05	2.1468	0.00086351	402.2281462956155	25.072	0.62081	24.627	24.303	24.924	-0.44582					28	13	3	0	0	0	0.18304	1	1299	1299		10.104	0.45776	1	179170			37068	14750	24631	24643	42172	42172					0.10517150807527287
MRKWLLLNDPE	11	Unmodified	_MRKWLLLNDPE_					0	0	0		nc|ENSG00000138119|Q9NZM1-5|MYOF;nc|ENSG00000138119|Q9NZM1-2|MYOF;nc|ENSG00000138119|Q9NZM1-6|MYOF;nc|ENSG00000138119|Q9NZM1-3|MYOF;ENSG00000138119|ENST00000359263|MYOF;nc|ENSG00000138119|Q9NZM1-8|MYOF;nc|ENSG00000138119|Q9NZM1-7|MYOF	nc|ENSG00000138119|Q9NZM1-5|MYOF	nc|ENSG00000138119|Q9NZM1-5|MYOF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.25445556640625	3	472.255228	1413.74386	-0.92467	-0.00043668	-2.9109	-0.0013747	-3.8356	-0.0018114	472.25410276976424	50.68	1.0487	50.688	50.257	51.306	0.0077438					42	31	2	0	0	0	0.76892	1	4320	4320		17.833	0.6664	1	169970			37069	4274	24632	24644	42173	42173					0.05353348679636838
MRLHLKKKKKK	11	Unmodified	_MRLHLKKKKKK_					0	0	0		AluSg_dup19667|chrX:108739236-108739535:-|1.3272035528017756|0.3052466787286038|2.12|46.0|8|2|sense	AluSg_dup19667|chrX:108739236-108739535:-|1.3272035528017756|0.3052466787286038|2.12|46.0|8|2|sense	AluSg_dup19667|chrX:108739236-108739535:-|1.3272035528017756|0.3052466787286038|2.12|46.0|8|2|sense	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.9924621582031	3	479.990269	1436.94898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.364	1	15.414	14.914	15.914	0.04908								0	0	0	0.56276	1	40	40		9.6461	0.43434	1				37070	3	24633	24645	42174	42174					0.24798172000487284
MRLKLFSILS	10	Unmodified	_MRLKLFSILS_					0	0	0		nc|ENSG00000164818|Q86Y56-2|DNAAF5;ENSG00000164818|ENST00000297440|DNAAF5;ENST00000491496.1_1_7:803580-810256:+|nuORF;nc|ENSG00000164818|Q86Y56-3|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3665771484375	2	604.365201	1206.71585	-0.11879	-7.1791E-05	2.2589	0.0013652	2.1401	0.0012934	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.86272	1	11682	11682		24.519	0.99649	1	64334000			37071	6006	24634	24646	42175	42175					0.12076070490184065
MRLTLLSSFRA	11	Unmodified	_MRLTLLSSFRA_					0	0	0			REV__ENST00000493027.5_1_1:45205556-45221765:+|nuORF	REV__ENST00000493027.5_1_1:45205556-45221765:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	647.8654174804688	2	647.86864	1293.72273	-1.1411	-0.00073931	-3.8651	-0.0025041	-5.0062	-0.0032434	647.8658405017543	113.32	2.2055	113.27	113.24	115.45	-0.044777					113	49	3	0	0	0	0.58425	3	12158	12158;12172;12216		45.972	10.633	1	4362100	+		37072	27683	24635	24647	42176;42177;42178	42176					0.08761383370756448
MRNKQLYY	8	Unmodified	_MRNKQLYY_					0	0	0			REV__ENSG00000168702|ENST00000389484|LRP1B	REV__ENSG00000168702|ENST00000389484|LRP1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	558.28515625	2	558.286951	1114.55935	-0.97789	-0.00054595	-3.1837	-0.0017774	-4.1616	-0.0023234	558.2847818887834	75.353	0.69984	75.44	75.146	75.846	0.087631					35	17	3	0	0	0	0.884	1	6984	6984		33.516	3.674	1	171770	+		37073	21512	24636	24648	42179	42179					0.006652053197285568
MRPAGPSAY	9	Unmodified	_MRPAGPSAY_					0	0	0			REV__ENSG00000177511|ENST00000324000|ST8SIA3	REV__ENSG00000177511|ENST00000324000|ST8SIA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.23138427734375	2	475.231645	948.448736	0.77942	0.0003704	-2.3452	-0.0011145	-1.5658	-0.00074413	475.2304337672562	54.45	0.92061	54.857	54.573	55.493	0.40663					26	21	2	0	0	0	0.7932	1	5534	5534		23.042	3.0457	1	649430	+		37074	22214	24637	24649	42180	42180					-0.027550146685030086
MRPAGPSAY	9	Unmodified	_MRPAGPSAY_					0	0	0			REV__ENSG00000177511|ENST00000324000|ST8SIA3	REV__ENSG00000177511|ENST00000324000|ST8SIA3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	475.231645	948.448736	-0.5208	-0.0002475	-1.3422	-0.00063788	-1.863	-0.00088538	475.2310325231826	54.875	0.43416	54.826	54.684	55.118	-0.049274	0.012798	0.00025561	NaN	23.042	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116780	+		37075	22214	24637	24649							-0.027550146685030086
MRPAGPSAY	9	Unmodified	_MRPAGPSAY_					0	0	0			REV__ENSG00000177511|ENST00000324000|ST8SIA3	REV__ENSG00000177511|ENST00000324000|ST8SIA3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	475.231645	948.448736	0.77942	0.0003704	-2.3452	-0.0011145	-1.5658	-0.00074413	475.2304337672562	54.45	0.92061	54.857	54.573	55.493	0.40663	0.043638	-0.00069771	NaN	23.042	26	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	649430	+		37076	22214	24637	24649							-0.027550146685030086
MRPAGPSAY	9	Unmodified	_MRPAGPSAY_					0	0	0			REV__ENSG00000177511|ENST00000324000|ST8SIA3	REV__ENSG00000177511|ENST00000324000|ST8SIA3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	475.231645	948.448736	-1.3712	-0.00065162	-0.14854	-7.059E-05	-1.5197	-0.00072221	475.23144055175624	54.172	0.45763	54.757	54.543	55.001	0.58474	-0.056436	0.0013902	NaN	23.042	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	588650	+		37077	22214	24637	24649							-0.027550146685030086
MRPLHLLVP	9	Unmodified	_MRPLHLLVP_					0	0	0			REV__ENST00000489097.5_1_1:6526697-6527309:-|nuORF	REV__ENST00000489097.5_1_1:6526697-6527309:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3265991210938	2	538.325879	1074.63721	-1.4902	-0.0008022	4.1746	0.0022473	2.6844	0.0014451	538.3280364010775	103.36	1.0546	103.48	103.07	104.12	0.11495					72	26	3	0	0	0	0.76402	1	10839	10839		35.201	6.0512	1	1412200	+		37078	27613	24638	24650	42181	42181					0.10287262975771228
MRPLLFLFLL	10	Unmodified	_MRPLLFLFLL_					0	0	0			REV__ENST00000507667.1_3_4:141445438-141445687:+|nuORF	REV__ENST00000507667.1_3_4:141445438-141445687:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.5950927734375	3	421.594634	1261.76207	0.912	0.00038449	-0.84354	-0.00035563	0.068453	2.8859E-05	421.59418663628617	15.491	0.32785	15.569	15.44	15.768	0.077959					27	14	2	0	0	0	0.85285	1	33	33		16.717	0	1	26587	+		37079	27910	24639	24651	42182	42182					0.14166135392292745
MRQSGGSQP	9	Unmodified	_MRQSGGSQP_					0	0	0		nc|ENSG00000184788|Q86VE3-2|SATL1;ENSG00000184788|ENST00000644105|SATL1	nc|ENSG00000184788|Q86VE3-2|SATL1	nc|ENSG00000184788|Q86VE3-2|SATL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2224426269531	2	474.221808	946.429063	-0.93499	-0.00044339	3.0888	0.0014648	2.1538	0.0010214	474.2234010405558	66.547	1.5603	67.098	66.602	68.163	0.55071					86	44	4	0	0	0	0.78124	1	7278	7278		30.318	4.7437	1	724640			37080	7641	24640	24652	42183	42183					-0.04629390679247081
MRREKKRKRKF	11	Unmodified	_MRREKKRKRKF_					0	0	0		ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	521.6573486328125	3	521.656061	1561.94635	-1.2934	-0.0006747	3.1859	0.0016619	1.8925	0.00098725	521.6576101839959	55.646	1.2053	55.646	55.208	56.414	0					123	38	5	0	0	0	0.77803	6	4811	4723;4734;4768;4796;4806;4811		15.921	7.5069	1	828200			37081	12899	24641	24653	42184;42185;42186;42187;42188;42189	42189					0.1878571659553927
MRREKKRKRKF	11	Unmodified	_MRREKKRKRKF_					0	0	0		ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	521.6547241210938	3	521.656061	1561.94635	0.0018454	9.6266E-07	2.1404	0.0011166	2.1423	0.0011175	521.6570438345822	55.201	1.4309	55.194	54.756	56.187	-0.0077057					142	39	5	0	0	0	0.77205	2	5013	4952;5013		17.167	7.9549	1	1446100			37082	12899	24641	24653	42190;42191	42191					0.1878571659553927
MRREKKRKRKF	11	Unmodified	_MRREKKRKRKF_					0	0	0		ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	521.655517578125	3	521.656061	1561.94635	-0.024988	-1.3035E-05	1.8158	0.00094722	1.7908	0.00093419	521.9913051099392	55.372	1.2186	55.345	54.89	56.109	-0.027279					135	32	5	0	0	0	0.77205	4	5110	5003;5048;5106;5110		17.167	7.5206	1	1514200			37083	12899	24641	24653	42192;42193;42194;42195	42195					0.1878571659553927
MRREKKRKRKF	11	Unmodified	_MRREKKRKRKF_					0	0	0		ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	521.6559448242188	3	521.656061	1561.94635	0.011985	6.2519E-06	1.6895	0.00088133	1.7015	0.00088758	521.6568251732957	55.332	1.3019	55.36	54.888	56.19	0.027672					121	33	5	0	0	0	0.76579	6	5071	4938;4962;4998;5017;5024;5071		18.531	11.166	1	1506400			37084	12899	24641	24653	42196;42197;42198;42199;42200;42201	42201					0.1878571659553927
MRREKKRKRKF	11	Unmodified	_MRREKKRKRKF_					0	0	0		ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	521.6573486328125	3	521.656061	1561.94635	-0.25952	-0.00013538	2.3343	0.0012177	2.0748	0.0010823	521.6571947989914	55.231	1.5244	55.294	54.783	56.307	0.063725					161	52	4	0	0	0	0.79476	10	4612	4593;4602;4612;4623;4631;4642;4653;4672;4681;4694		12.433	8.0459	1	1935400			37085	12899	24641	24653	42202;42203;42204;42205;42206;42207;42208;42209;42210;42211	42204					0.1878571659553927
MRREKKRKRKF	11	Unmodified	_MRREKKRKRKF_					0	0	0		ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	521.991943359375	3	521.656061	1561.94635	0.41338	0.00021564	1.5578	0.00081263	1.9712	0.0010283	521.9911888530377	55.139	1.4097	55.23	54.807	56.216	0.091167					167	45	5	0	0	0	0.73647	6	4580	4580;4591;4623;4633;4662;4685		25.068	15.46	1	1954200			37086	12899	24641	24653	42212;42213;42214;42215;42216;42217	42212					0.1878571659553927
MRREKKRKRKF	11	Unmodified	_MRREKKRKRKF_					0	0	0		ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	521.9917602539062	3	521.656061	1561.94635	-0.37881	-0.00019761	2.4265	0.0012658	2.0477	0.0010682	521.6571917476966	55.116	1.5547	55.068	54.591	56.146	-0.04821					175	52	5	0	0	0	0.76892	7	4612	4594;4612;4623;4632;4640;4651;4661		17.833	9.0241	1	1771100			37087	12899	24641	24653	42218;42219;42220;42221;42222;42223;42224	42219					0.1878571659553927
MRREKKRKRKF	11	Unmodified	_MRREKKRKRKF_					0	0	0		ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.6565551757812	3	521.656061	1561.94635	0.37306	0.00019461	1.2802	0.00066783	1.6533	0.00086244	521.656656425167	52.663	1.4499	53.086	52.596	54.046	0.42348					108	34	5	0	0	0	0.79224	4	5298	5264;5275;5298;5330		12.957	6.734	1	2294600			37088	12899	24641	24653	42225;42226;42227;42228	42227					0.1878571659553927
MRREKKRKRKF	11	Unmodified	_MRREKKRKRKF_					0	0	0		ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	ENST00000504131.6_1_4:170641157-170641199:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.6569213867188	3	521.656061	1561.94635	0.10296	5.3708E-05	1.7501	0.00091297	1.8531	0.00096667	521.6568980365676	52.326	1.6503	52.993	52.596	54.247	0.66729					114	39	4	0	0	0	0.75779	5	5288	5240;5253;5264;5275;5288		20.315	6.8071	1	2604100			37089	12899	24641	24653	42229;42230;42231;42232;42233	42233					0.1878571659553927
MRRRFTEQCVS	11	Unmodified	_MRRRFTEQCVS_					0	0	0			REV__ENSG00000204859|ENST00000377674|ZBTB48	REV__ENSG00000204859|ENST00000377674|ZBTB48	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	471.5647888183594	3	471.567701	1411.68127	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.074	1	27.183	26.683	27.683	0.10901								0	0	0	0.56276	1	1063	1063		20.315	0.68808	1		+		37090	23526	24642	24654	42234	42234					-0.008101206602077582
MRSKKKRR	8	Unmodified	_MRSKKKRR_					0	0	0			REV__nc|ENSG00000187258|Q6W5P4-9|NPSR1	REV__nc|ENSG00000187258|Q6W5P4-9|NPSR1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3170166015625	2	545.342926	1088.6713	2.2649	0.0012352	2.4864	0.0013559	4.7513	0.0025911	545.344297135086	91.02	0.19675	90.953	90.879	91.076	-0.067093					6	4	2	0	0	0	0.4196	1	9575	9575		26.693	10.22	1	42104	+		37091	22910	24643	24655	42235	42235					0.13051104187388773
MRSKKVVQN	9	Unmodified	_MRSKKVVQN_					0	0	0		nc|ENSG00000123552|Q70EL2-3|USP45	nc|ENSG00000123552|Q70EL2-3|USP45	nc|ENSG00000123552|Q70EL2-3|USP45	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3167724609375	2	545.3135	1088.61245	1.9901	0.0010853	3.8799	0.0021158	5.87	0.003201	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.71772	2	9156	9049;9156		39.253	3.6345	1	4704900			37092	14884	24644	24656	42236;42237	42237					0.07168583102406956
MRSRARPLPF	10	Unmodified	_MRSRARPLPF_					0	0	0			REV__ENST00000577992.1_1_18:9136933-9182416:+|nuORF	REV__ENST00000577992.1_1_18:9136933-9182416:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	410.89984130859375	3	410.90112	1229.68153	0.7063	0.00029022	-2.6456	-0.0010871	-1.9393	-0.00079688	410.89988881916554	22.416	0.7554	22.481	22.212	22.968	0.064745					44	27	3	0	0	0	0.86698	1	683	683		28.081	4.7036	1	35977	+		37093	29016	24645	24657	42238	42238					0.07587667121947561
MRTKIKAKLHQ	11	Unmodified	_MRTKIKAKLHQ_					0	0	0		ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.94317626953125	3	451.943096	1352.80746	-1.6861	-0.00076203	1.9958	0.000902	0.30971	0.00013997	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.74405	1	4521	4521		23.378	2.3457	1	792670			37094	7749	24646	24658	42239	42239					0.14516753907378188
MRTKIKAKLHQ	11	Unmodified	_MRTKIKAKLHQ_					0	0	0		ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.94329833984375	3	451.943096	1352.80746	0.2172	9.8162E-05	-0.041578	-1.8791E-05	0.17562	7.9371E-05	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.76892	1	4747	4747		17.833	1.9125	1	771970			37095	7749	24646	24658	42240	42240					0.14516753907378188
MRTKIKAKLHQ	11	Unmodified	_MRTKIKAKLHQ_					0	0	0		ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.94366455078125	3	451.943096	1352.80746	0.028854	1.304E-05	0.38942	0.000176	0.41828	0.00018904	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.71207	1	4918	4918		29.551	6.1728	1	513120			37096	7749	24646	24658	42241	42241					0.14516753907378188
MRTSKRRK	8	Unmodified	_MRTSKRRK_					0	0	0			REV__ENST00000300648.6_1_12:120565361-120565607:-|nuORF	REV__ENST00000300648.6_1_12:120565361-120565607:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8172607421875	2	531.819284	1061.62402	-0.69524	-0.00036974	-3.8422	-0.0020433	-4.5374	-0.0024131	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.89962	1	10254	10254		38.806	0.99462	1	1296000	+		37097	24751	24647	24659	42242	42242					0.09566824916373662
MRWWHEWRRHE	11	Unmodified	_MRWWHEWRRHE_					0	0	0			REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.6085815429688	3	570.272387	1707.79533	0.4292	0.00024476	2.2758	0.0012978	2.705	0.0015426	570.6076445105451	39.865	0.47314	39.872	39.598	40.071	0.0065002					16	11	2	0	0	0	0.92084	1	2486	2486		1.3219	0	1	97043	+		37098	26194	24648	24660	42243	42243					-0.03025469783119661
MSASTSSH	8	Unmodified	_MSASTSSH_					0	0	0		ENSG00000102055|ENST00000378131|PPP1R2C	ENSG00000102055|ENST00000378131|PPP1R2C	ENSG00000102055|ENST00000378131|PPP1R2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.1702575683594	2	404.16871	806.322867	-0.18774	-7.5878E-05	3.363	0.0013592	3.1752	0.0012833	404.170229386983	78.542	2.4005	78.598	78.112	80.513	0.056114					177	77	5	0	0	0	0.86288	1	7704	7704		26.796	4.8362	1	6189200			37099	1986	24649	24661	42244	42244					-0.08804146244585809
MSASTSSH	8	Unmodified	_MSASTSSH_					0	0	0		ENSG00000102055|ENST00000378131|PPP1R2C	ENSG00000102055|ENST00000378131|PPP1R2C	ENSG00000102055|ENST00000378131|PPP1R2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.1708068847656	2	404.16871	806.322867	0.028783	1.1633E-05	2.5917	0.0010475	2.6205	0.0010591	404.17015585403414	78.633	4.5965	78.579	78.135	82.731	-0.053558					226	127	5	0	0	0	0.86288	1	7926	7926		26.796	2.5934	1	6964800			37100	1986	24649	24661	42245	42245					-0.08804146244585809
MSASTSSH	8	Unmodified	_MSASTSSH_					0	0	0		ENSG00000102055|ENST00000378131|PPP1R2C	ENSG00000102055|ENST00000378131|PPP1R2C	ENSG00000102055|ENST00000378131|PPP1R2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.170654296875	2	404.16871	806.322867	2.4772	0.0010012	0.73353	0.00029647	3.2107	0.0012977	404.16914392538314	78.456	2.0058	78.508	78.086	80.092	0.051682					179	62	5	0	0	0	0.85277	2	7826	7826;7853		31.955	4.0726	1	6709200			37101	1986	24649	24661	42246;42247	42246					-0.08804146244585809
MSDTTFKAL	9	Unmodified	_MSDTTFKAL_					0	0	0		ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000565906.2_1_15:89532752-89533049:-|nuORF;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF	ENSG00000116489|ENST00000263168|CAPZA1;ENST00000466066.1_1_1:113202257-113212751:+|nuORF	ENSG00000116489|ENST00000263168|CAPZA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.2523193359375	2	507.252243	1012.48993	-0.23679	-0.00012011	-0.48884	-0.00024796	-0.72562	-0.00036807	507.25193540819566	49.346	0.57351	49.806	49.54	50.114	0.45983					36	13	4	0	0	0	0.29259	2	4820	4808;4820		65.465	16.024	1	712130			37102	2921;12122	24650	24662	42248;42249	42249					-0.01581298419682753
MSDTTFKAL	9	Unmodified	_MSDTTFKAL_					0	0	0		ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000565906.2_1_15:89532752-89533049:-|nuORF;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF	ENSG00000116489|ENST00000263168|CAPZA1;ENST00000466066.1_1_1:113202257-113212751:+|nuORF	ENSG00000116489|ENST00000263168|CAPZA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.25244140625	2	507.252243	1012.48993	1.3493	0.00068444	-1.6913	-0.0008579	-0.34196	-0.00017346	507.2511359087453	49.23	0.56719	50.134	49.846	50.413	0.90424					28	13	3	0	0	0	0.41984	1	4808	4808		56.434	1.6575	1	723730			37103	2921;12122	24650	24662	42250	42250					-0.01581298419682753
MSEGLNFCSE	10	Unmodified	_MSEGLNFCSE_					0	0	0		ENSG00000181004|ENST00000314218|BBS12	ENSG00000181004|ENST00000314218|BBS12	ENSG00000181004|ENST00000314218|BBS12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.7206420898438	2	558.720449	1115.42635	-0.22437	-0.00012536	0.17777	9.9324E-05	-0.046598	-2.6035E-05	558.7204896054075	53.13	0.66273	53.744	53.49	54.152	0.61436					36	15	4	0	0	0	0.38353	1	5372	5372		65.465	0	1	1073900			37104	7365	24651	24663	42251	42251					-0.12675026919100674
MSEKVRPPVH	10	Unmodified	_MSEKVRPPVH_					0	0	0			REV__ENSG00000165283|ENST00000356493|STOML2	REV__ENSG00000165283|ENST00000356493|STOML2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8668212890625	2	590.318783	1178.62301	0.8907	0.0005258	-3.4917	-0.0020612	-2.601	-0.0015354	590.3157828138089	104.14	0.12748	104.26	104.15	104.28	0.11685					4	2	2	0	0	0	0.37624	1	11040	11040		39.253	1.4413	1	36296	+		37105	21171	24652	24664	42252	42252					0.04084565756807024
MSEMQKKIN	9	Unmodified	_MSEMQKKIN_					0	0	0		nc|ENSG00000138778|Q02224-3|CENPE;chr4:103163256-103174736|63|39.62|0.34|6.87|-|ENST00000380026|CENPE,CENPE;chr4:103138452-103140256|63|22.33|0.54|5.36|-|ENST00000380026|CENPE,CENPE;ENSG00000138778|ENST00000265148|CENPE	nc|ENSG00000138778|Q02224-3|CENPE	nc|ENSG00000138778|Q02224-3|CENPE	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.7952270507812	2	554.778102	1107.54165	-0.11407	-6.3284E-05	3.2661	0.001812	3.1521	0.0017487	554.7796994340168	72.192	0.53821	72.742	72.483	73.022	0.55008					19	12	2	0	0	0	0.20789	1	8086	8086		24.519	10.382	1	103750			37106	411	24653	24665	42253	42253					-0.007818779974058998
MSEPNFMEIP	10	Oxidation (M)	_MSEPNFM(Oxidation (M))EIP_		MSEPNFM(1)EIP		M(-58)SEPNFM(58)EIP	0	0	1		ENSG00000012232|ENST00000220562|EXTL3	ENSG00000012232|ENST00000220562|EXTL3	ENSG00000012232|ENST00000220562|EXTL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.7576904296875	2	605.759575	1209.5046	-0.22901	-0.00013872	-2.8807	-0.001745	-3.1097	-0.0018837	605.7576858333924	53.63	1.2061	54.214	53.584	54.79	0.58474					60	28	3	0	0	0	0.2575	2	5444	5444;5456		77.318	9.8239	2	1127200			37107	800	24654	24666	42254;42255	42254		12			-0.0917759433386891
MSFLSHVL	8	Oxidation (M)	_M(Oxidation (M))SFLSHVL_		M(1)SFLSHVL		M(60)SFLSHVL	0	0	1			REV__ENSG00000153253|ENST00000283254|SCN3A;REV__nc|ENSG00000169432|Q15858-4|SCN9A;REV__nc|ENSG00000144285|P35498-3|SCN1A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.24566650390625	2	475.244221	948.473888	0.019063	9.0596E-06	2.3115	0.0010985	2.3306	0.0011076	475.24524118792397	32.051	0.73082	32.177	31.903	32.634	0.12643					29	16	3	0	0	0	0.84634	1	2205	2205		60.294	12.378	1	266730	+		37108	15734;15736;19879	24655	24667	42256	42256		224			-0.0024095986592556073
MSGDASVCPD	10	Unmodified	_MSGDASVCPD_					0	0	0		ENSG00000187764|ENST00000422704|SEMA4D	ENSG00000187764|ENST00000422704|SEMA4D	ENSG00000187764|ENST00000422704|SEMA4D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.1870422363281	2	491.186242	980.357932	-0.67764	-0.00033285	-0.88467	-0.00043454	-1.5623	-0.00076738	491.18572201502644	73.987	0.77419	74.114	73.851	74.625	0.12711					56	31	2	0	0	0	0.8608	1	6834	6834		34.173	3.6689	1	181110			37109	7878	24656	24668	42257	42257					-0.13303271498944014
MSGYLYRS	8	Unmodified	_MSGYLYRS_					0	0	0		ENST00000451107.3_1_12:95475298-95611245:-|nuORF;nc|ENSG00000180263|Q6ZV73-2|FGD6;ENSG00000180263|ENST00000343958|FGD6	ENST00000451107.3_1_12:95475298-95611245:-|nuORF	ENST00000451107.3_1_12:95475298-95611245:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7322692871094	2	488.731477	975.448402	0.17657	8.6297E-05	2.4021	0.001174	2.5787	0.0012603	488.7324960866976	55.47	0.62134	56.039	55.741	56.363	0.56836					36	14	3	0	0	0	0.38743	1	5696	5696		92.191	4.4363	1	1636700			37110	7322	24657	24669	42258	42258					-0.040304343883462934
MSHACGDTLKN	11	Oxidation (M)	_M(Oxidation (M))SHACGDTLKN_		M(1)SHACGDTLKN		M(58)SHACGDTLKN	0	0	1			REV__ENSG00000167207|ENST00000647318|NOD2	REV__ENSG00000167207|ENST00000647318|NOD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.755126953125	2	596.757898	1191.50124	-2.1043	-0.0012557	-2.4051	-0.0014352	-4.5093	-0.002691	596.7562804580269	42.966	0.87915	42.966	42.535	43.414	0.00016785					54	20	4	0	0	0	0.41466	1	3292	3292		58.23	15.834	1	1234200	+		37111	21367	24658	24670	42259	42259		318			-0.08684844387857993
MSHLHLVALI	10	Unmodified	_MSHLHLVALI_					0	0	0			REV__ENST00000464879.1_1_3:133921542-133926343:-|nuORF	REV__ENST00000464879.1_1_3:133921542-133926343:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3300170898438	2	567.328619	1132.64269	1.8589	0.0010546	0.20517	0.0001164	2.0641	0.001171	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86589	1	9730	9730		29.15	1.2673	1	15439000	+		37112	20969	24659	24671	42260	42260					0.0816694176760393
MSKIKGLP	8	Unmodified	_MSKIKGLP_					0	0	0			REV__nc|ENSG00000116783|Q59H18-3|TNNI3K	REV__nc|ENSG00000116783|Q59H18-3|TNNI3K	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26544189453125	2	437.264956	872.515359	-2.1366	-0.00093428	3.8525	0.0016846	1.7158	0.00075028	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.84341	1	653	653		24.203	0	1	999210	+		37113	29797	24660	24672	42261	42261					0.0740022089340755
MSKKPMPLFL	10	Unmodified	_MSKKPMPLFL_					0	0	0			REV__ENSG00000135917|ENST00000644224|SLC19A3	REV__ENSG00000135917|ENST00000644224|SLC19A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3325805664062	2	596.335055	1190.65556	-0.57959	-0.00034563	-3.0292	-0.0018064	-3.6088	-0.002152	596.3331084008277	96.35	3.5496	96.416	95.306	98.855	0.06591					255	82	4	0	0	0	0.85934	1	10127	10127		35.618	5.3006	1	1242500	+		37114	19268	24661	24673	42262	42262					0.06785636835456899
MSKLQLVQGLF	11	Oxidation (M)	_M(Oxidation (M))SKLQLVQGLF_		M(1)SKLQLVQGLF		M(53)SKLQLVQGLF	0	0	1			REV__ENST00000481773.1_1_3:113952355-113954212:+|nuORF	REV__ENST00000481773.1_1_3:113952355-113954212:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3592529296875	2	640.357573	1278.70059	0.92817	0.00059436	1.0646	0.00068171	1.9928	0.0012761	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.48313	1	10345	10345		53.089	8.0668	1	603720	+		37115	27449	24662	24674	42263	42263		410			0.07239158902348208
MSKRYLQK	8	Oxidation (M)	_M(Oxidation (M))SKRYLQK_		M(1)SKRYLQK		M(58)SKRYLQK	0	0	1		ENSG00000198673|ENST00000416284|TAFA2;chr12:61720924-61753622|17|12.41|0.39|5.0|-|ENST00000549379|TAFA2,TAFA2;chr12:61710417-61720687|19|10.42|0.42|4.63|-|ENST00000549379|TAFA2,TAFA2	ENSG00000198673|ENST00000416284|TAFA2	ENSG00000198673|ENST00000416284|TAFA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2925415039062	2	535.294776	1068.575	-0.14794	-7.919E-05	-2.8105	-0.0015044	-2.9584	-0.0015836	535.2931287950377	26.772	0.5403	26.597	26.341	26.881	-0.17559					28	11	3	0	0	0	0.88944	1	1493	1493		57.811	9.8957	1	202840			37116	137	24663	24675	42264	42264		2			0.04345491836761539
MSKTKFFV	8	Unmodified	_MSKTKFFV_					0	0	0			REV__ENSG00000102239|ENST00000370648|BRS3	REV__ENSG00000102239|ENST00000370648|BRS3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3008117675781	2	494.270238	986.525924	0.76494	0.00037809	-1.5715	-0.00077673	-0.80654	-0.00039865	494.2686003433063	97.157	1.4057	97.321	96.966	98.371	0.16316					37	32	2	0	0	0	0.4196	1	10142	10142		47.916	12.297	1	278360	+		37117	17331	24664	24676	42265	42265					0.032122035478323596
MSKVLVYQ	8	Unmodified	_MSKVLVYQ_					0	0	0		MER57A-int_dup1703|chr19:23112751-23113886:+|1.179770426644866|0.266030358890427|2.15|63.0|37|2|sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.179770426644866|0.266030358890427|2.15|63.0|37|2|sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.179770426644866|0.266030358890427|2.15|63.0|37|2|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.2785339355469	2	484.267696	966.520839	-0.75264	-0.00036448	-2.073	-0.0010039	-2.8256	-0.0013683	484.2666539523847	95.142	0.82844	95.189	94.92	95.748	0.046982					30	19	2	0	0	0	0.4196	1	10117	10117		5.5578	0	1	113340			37118	14716	24665	24677	42266	42266					0.036238996851921
MSLALRSEL	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MSLALRSEL_					1	0	0		ENSG00000153140|ENST00000283122|CETN3	ENSG00000153140|ENST00000283122|CETN3	ENSG00000153140|ENST00000283122|CETN3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.28564453125	2	531.286617	1060.55868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.076	1	55.644	55.144	56.144	0.56836								0	0	0	0.4027	1	5652	5652		54.776	12.38	1				37119	5216	24666	24678	42267	42267					0.030823658800272824
MSLGWMAQF	9	Unmodified	_MSLGWMAQF_					0	0	0		ENST00000528793.5_1_5:176867950-176869060:+|nuORF	ENST00000528793.5_1_5:176867950-176869060:+|nuORF	ENST00000528793.5_1_5:176867950-176869060:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7432861328125	2	535.743531	1069.47251	-0.816	-0.00043717	-0.15318	-8.2064E-05	-0.96918	-0.00051923	535.7433567835764	61.922	1.4059	62.31	61.866	63.272	0.38846					81	31	4	0	0	0	0.073112	2	6608	6597;6608		99.375	8.5983	1	3172900			37120	13311	24667	24679	42268;42269	42269					-0.05944917226361213
MSLIGLKVSA	10	Unmodified	_MSLIGLKVSA_					0	0	0			REV__ENST00000260665.11_1_2:44201425-44201854:-|nuORF	REV__ENST00000260665.11_1_2:44201425-44201854:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8037414550781	2	509.801903	1017.58925	-0.38177	-0.00019462	3.8836	0.0019799	3.5019	0.0017853	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.78666	1	8317	8317		40.058	10.909	1	948010	+		37121	24371	24668	24680	42270	42270					0.08116144265056846
MSLLILLFIHL	11	Unmodified	_MSLLILLFIHL_					0	0	0			REV__nc|ENSG00000138696|O00238-2|BMPR1B	REV__nc|ENSG00000138696|O00238-2|BMPR1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.27264404296875	3	438.27356	1311.79885	-0.96188	-0.00042157	-0.12744	-5.5855E-05	-1.0893	-0.00047742	438.27344423982936	106.61	0.75021	106.61	106.14	106.89	0					48	16	4	0	0	0	0.76892	1	11068	11068		17.833	0.6664	1	872140	+		37122	29886	24669	24681	42271	42271					0.15542387218192744
MSLQSMKAQ	9	Unmodified	_MSLQSMKAQ_					0	0	0		nc|ENSG00000158691|O43309-2|ZSCAN12;ENSG00000158691|ENST00000684592|ZSCAN12	nc|ENSG00000158691|O43309-2|ZSCAN12	nc|ENSG00000158691|O43309-2|ZSCAN12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.2494506835938	2	512.25172	1022.48889	0.38229	0.00019583	-3.9962	-0.0020471	-3.6139	-0.0018512	512.2495320393629	21.777	0.42815	21.148	20.887	21.315	-0.62835					19	10	2	0	0	0	0.75725	1	814	814		36.447	2.5251	1	54264			37123	5493	24670	24682	42272	42272					-0.021458360602423454
MSLSQTTYT	9	Unmodified	_MSLSQTTYT_					0	0	0		ENSG00000243978|ENST00000520821|RTL9;chrX:110454664-110455202|54|88.02|0.82|6.75|+|ENST00000540313|RTL9,RTL9	ENSG00000243978|ENST00000520821|RTL9	ENSG00000243978|ENST00000520821|RTL9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3137817382812	2	516.239332	1030.46411	0.86383	0.00044594	3.0107	0.0015542	3.8745	0.0020002	516.24002889007	99.694	0.17392	99.742	99.59	99.764	0.047523					5	3	2	0	0	0	0.20789	1	10672	10672		26.693	11.051	1	29128			37124	537	24671	24683	42273	42273					-0.0499019266196683
MSLTHRLH	8	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))SLTHRLH_		M(1)SLTHRLH		M(82)SLTHRLH	1	0	1		nc|ENSG00000006659|Q8TCE9-2|LGALS14	nc|ENSG00000006659|Q8TCE9-2|LGALS14	nc|ENSG00000006659|Q8TCE9-2|LGALS14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.80859375	2	526.768926	1051.5233	2.116	0.0011146	0.71121	0.00037465	2.8272	0.0014893	526.7677033697304	99.752	0.444	100.08	99.81	100.25	0.33294					13	10	2	0	0	0	0.4196	1	12028	12028		82.305	10.927	1	118730			37125	14734	24672	24684	42274	42274		210			-0.0004025185712634993
MSMENVQNH	9	Oxidation (M)	_MSM(Oxidation (M))ENVQNH_		M(0.174)SM(0.826)ENVQNH		M(-6.8)SM(6.8)ENVQNH	0	0	1		ENST00000317178.9_1_19:58266102-58266228:+|nuORF	ENST00000317178.9_1_19:58266102-58266228:+|nuORF	ENST00000317178.9_1_19:58266102-58266228:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.224853515625	2	553.223691	1104.43283	0.29822	0.00016498	2.0416	0.0011295	2.3398	0.0012945	553.2247748985499	30.545	0.56795	30.498	30.274	30.842	-0.047064					23	14	2	0	0	0	0.67345	1	1670	1670		42.396	10.866	2	54039			37126	9991	24673	24685	42275	42275		166			-0.11521088967720061
MSMWLAGH	8	Unmodified	_MSMWLAGH_					0	0	0		ENST00000502875.1_1_4:141566092-141566329:-|nuORF	ENST00000502875.1_1_4:141566092-141566329:-|nuORF	ENST00000502875.1_1_4:141566092-141566329:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.70721435546875	2	466.709491	931.404429	-0.045544	-2.1256E-05	-3.1985	-0.0014928	-3.2441	-0.001514	466.70771214249567	76.497	0.70937	76.897	76.367	77.077	0.3997					32	17	2	0	0	0	0.86791	1	8693	8693		28.254	2.8041	1	236870			37127	12867	24674	24686	42276	42276					-0.06401742086347895
MSNEDMDDD	9	Unmodified	_MSNEDMDDD_					0	0	0			REV__nc|ENSG00000256463|Q9BXA9-3|SALL3	REV__nc|ENSG00000256463|Q9BXA9-3|SALL3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	536.1656494140625	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.905	1	78.905	78.405	79.405	0								0	0	0	0.34932	1	7237	7237		14.865	3.3539	1		+		37128	23908	24675	24687	42277	42277					-0.21549077329086685
MSNEDMDDD	9	Unmodified	_MSNEDMDDD_					0	0	0			REV__nc|ENSG00000256463|Q9BXA9-3|SALL3	REV__nc|ENSG00000256463|Q9BXA9-3|SALL3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1641845703125	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.918	1	20.964	20.464	21.464	0.045401								0	0	0	0.33676	1	532	532		18.324	1.8513	1		+		37129	23908	24675	24687	42278	42278					-0.21549077329086685
MSNKQYYDA	9	Unmodified	_MSNKQYYDA_					0	0	0		ENST00000463543.5_1_1:151143496-151146942:-|nuORF;ENSG00000163157|ENST00000295314|TMOD4	ENST00000463543.5_1_1:151143496-151146942:-|nuORF	ENST00000463543.5_1_1:151143496-151146942:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.243896484375	2	560.242406	1118.47026	0.98187	0.00055008	2.5915	0.0014519	3.5734	0.002002	560.2437469662866	27.215	0.57136	27.188	26.893	27.464	-0.027706					29	15	2	0	0	0	0.35373	1	1216	1216		60.972	6.2496	1	74056			37130	5772	24676	24688	42279	42279					-0.08423674430446226
MSPALRQQLAH	11	Unmodified	_MSPALRQQLAH_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3323364257812	2	626.334964	1250.65538	-0.6713	-0.00042046	-2.7518	-0.0017235	-3.4231	-0.002144	626.3330596948049	43.058	0.73404	43.058	42.724	43.458	0.00016785					42	16	4	0	0	0	0.41466	1	3287	3287		58.23	5.2932	1	337190	+		37131	21394	24677	24689	42280	42280					0.040073531598181944
MSQEPWPI	8	Unmodified	_MSQEPWPI_					0	0	0			REV__ENST00000460680.5_1_3:52435606-52435687:-|nuORF	REV__ENST00000460680.5_1_3:52435606-52435687:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.73681640625	2	494.233853	986.453153	0.86147	0.00042577	2.8599	0.0014135	3.7214	0.0018392	494.23506236337215	21.782	0.52663	21.847	21.611	22.138	0.064745					29	18	2	0	0	0	0.93786	1	629	629		53.351	3.3269	1	30883	+		37132	27012	24678	24690	42281	42281					-0.04061550245603485
MSRGPAALRRE	11	Unmodified	_MSRGPAALRRE_					0	0	0		ENST00000374694.2_1_10:35930658-35931186:-|nuORF	ENST00000374694.2_1_10:35930658-35931186:-|nuORF	ENST00000374694.2_1_10:35930658-35931186:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3355102539062	2	622.338038	1242.66152	-0.073789	-4.5921E-05	-2.5278	-0.0015731	-2.6016	-0.001619	622.3363752507829	111.19	1.2568	111.19	110.57	111.83	0					110	41	4	0	0	0	0.62614	1	11558	11558		41.427	5.8083	1	190840			37133	10784	24679	24691	42282	42282					0.04989871391308043
MSRKRFGRLT	10	Unmodified	_MSRKRFGRLT_					0	0	0		ENST00000380455.8_2_6:3012807-3012897:+|nuORF	ENST00000380455.8_2_6:3012807-3012897:+|nuORF	ENST00000380455.8_2_6:3012807-3012897:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.92230224609375	3	417.908274	1250.70299	3.1804	0.0013291	0.43541	0.00018196	3.6158	0.0015111	418.2422790668322	105.85	0.43956	105.89	105.67	106.11	0.038322					13	10	2	0	0	0	0.37624	1	11598	11598		9.6461	0	1	321160			37134	10921	24680	24692	42283	42283					0.08767052150665222
MSRLKRIAG	9	Unmodified	_MSRLKRIAG_					0	0	0		ENSG00000066557|ENST00000370952|LRRC40	ENSG00000066557|ENST00000370952|LRRC40	ENSG00000066557|ENST00000370952|LRRC40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.8173828125	2	516.310761	1030.60697	3.1012	0.0016012	3.1636	0.0016334	6.2648	0.0032346	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.64922	1	13116	13116		44.117	8.9161	1	1162600			37135	1163	24681	24693	42284	42284					0.0928890431059699
MSRNVLLQM	9	Oxidation (M)	_MSRNVLLQM(Oxidation (M))_		MSRNVLLQM(1)		M(-100)SRNVLLQM(100)	0	0	1		ENSG00000177119|ENST00000320560|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6;nc|ENSG00000177119|Q4KMQ2-2|ANO6;ENST00000426898.2_1_12:45609984-45725085:+|nuORF	ENSG00000177119|ENST00000320560|ANO6	ENSG00000177119|ENST00000320560|ANO6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.287109375	2	554.286094	1106.55763	-0.81094	-0.00044949	3.0907	0.0017131	2.2798	0.0012636	554.2876595285483	60.14	0.93211	60.127	59.719	60.651	-0.013729					69	23	5	0	0	0	0.057432	1	5528	5528		104.75	6.1172	2	1684300			37136	7119	24682	24694	42285	42285		123			0.008618282394536436
MSRPCLLFF	9	Unmodified	_MSRPCLLFF_					0	0	0			REV__ENST00000530659.1_1_11:101918495-101953927:+|nuORF	REV__ENST00000530659.1_1_11:101918495-101953927:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.2823486328125	2	557.282823	1112.55109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.292	1	71.326	70.826	71.826	0.034004								0	0	0	0.30053	1	6750	6750		30.504	2.6214	1		+		37137	28286	24683	24695	42286	42286					-0.0006806492124269425
MSRPDSRSRSP	11	Unmodified	_MSRPDSRSRSP_					0	0	0		ENST00000594805.3_1_19:18322605-18328098:+|nuORF	ENST00000594805.3_1_19:18322605-18328098:+|nuORF	ENST00000594805.3_1_19:18322605-18328098:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	638.3167114257812	2	638.31476	1274.61497	-0.8486	-0.00054167	3.6454	0.0023269	2.7969	0.0017853	638.3170070427124	72.018	1.5366	72.403	71.877	73.413	0.38581					96	36	5	0	0	0	0.60687	1	8007	8007		43.651	0.78652	1	6693700			37138	14320	24684	24696	42287	42287					-0.011356132305991196
MSRSERHFAM	10	Unmodified	_MSRSERHFAM_					0	0	0		ENST00000506605.6_1_5:112478939-112479029:-|nuORF	ENST00000506605.6_1_5:112478939-112479029:-|nuORF	ENST00000506605.6_1_5:112478939-112479029:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3795776367188	2	626.289699	1250.56485	0.92587	0.00057986	0.53098	0.00033255	1.4568	0.00091241	626.7912491334476	105.72	0.22876	105.82	105.73	105.96	0.10766					7	5	2	0	0	0	0.37624	1	11272	11272		31.53	0	1	75009			37139	12941	24685	24697	42288	42288					-0.050414391601179886
MSRVALQKSAS	11	Unmodified	_MSRVALQKSAS_					0	0	0		ENSG00000158480|ENST00000289431|SPATA2	ENSG00000158480|ENST00000289431|SPATA2	ENSG00000158480|ENST00000289431|SPATA2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3426513671875	2	589.321522	1176.62849	-0.6756	-0.00039815	1.7879	0.0010537	1.1123	0.00065552	589.3202901949383	93.975	0.67783	94.045	93.794	94.471	0.069603					23	15	3	0	0	0	0.17553	1	9783	9783		36.318	9.6247	1	98920			37140	5481	24686	24698	42289	42289					0.04724244548629031
MSSKIQPAP	9	Unmodified	_MSSKIQPAP_					0	0	0		nc|ENSG00000169398|Q05397-2|PTK2;nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-6|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.7522277832031	2	479.754953	957.495352	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.538	1	55.568	55.068	56.068	0.030838								0	0	0	0.30416	1	4990	4990		29.15	3.6994	1				37141	6494	24687	24699	42290	42290					0.01490425162774045
MSSLPTRLGTG	11	Unmodified	_MSSLPTRLGTG_					0	0	0		ENST00000482963.1_1_10:126305912-126306089:+|nuORF	ENST00000482963.1_1_10:126305912-126306089:+|nuORF	ENST00000482963.1_1_10:126305912-126306089:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.340087890625	2	560.294973	1118.57539	3.1403	0.0017595	-0.3372	-0.00018893	2.8031	0.0015705	560.2950572162359	102.67	0.49182	102.63	102.34	102.83	-0.047005					18	11	3	0	0	0	0.17527	1	11211	11211		47.96	18.81	1	90196			37142	12498	24688	24700	42291	42291					0.020848667659720377
MSSLRFCAGPL	11	Unmodified	_MSSLRFCAGPL_					0	0	0		nc|ENSG00000168679|O15374-3|SLC16A4;ENSG00000168679|ENST00000369779|SLC16A4	nc|ENSG00000168679|O15374-3|SLC16A4	nc|ENSG00000168679|O15374-3|SLC16A4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.7037353515625	2	591.293919	1180.57328	0.30653	0.00018125	-1.3363	-0.00079014	-1.0298	-0.00060889	591.7952390364977	26.4	0.29496	26.361	26.14	26.435	-0.038523					7	5	2	0	0	0	0.17431	1	1192	1192		31.53	2.3598	1	20778			37143	6425	24689	24701	42292	42292					-0.009778852434919827
MSTFMKFL	8	Oxidation (M)	_M(Oxidation (M))STFMKFL_		M(1)STFMKFL		M(42)STFM(-42)KFL	0	0	1			REV__ENST00000474543.5_1_20:57564608-57568882:+|nuORF	REV__ENST00000474543.5_1_20:57564608-57568882:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.7497863769531	2	510.748282	1019.48201	0.6212	0.00031727	1.7273	0.00088221	2.3485	0.0011995	510.74902337734727	58.348	0.86596	58.902	58.555	59.421	0.55323					51	20	3	0	0	0	0.93786	1	6143	6143		53.351	14.545	2	1125700	+		37144	17245	24690	24702	42293	42293					-0.02695148940802028
MSVLCLKN	8	Unmodified	_MSVLCLKN_					0	0	0			REV__nc|ENSG00000291085|Q9H0A3|TMEM191A	REV__nc|ENSG00000291085|Q9H0A3|TMEM191A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.2417297363281	2	454.240624	906.466695	-0.13611	-6.1827E-05	3.841	0.0017447	3.7049	0.0016829	454.2422343635793	83.137	1.2007	83.204	82.829	84.03	0.066727					41	27	2	0	0	0	0.91472	1	8263	8263		44.117	1.6423	1	327010	+		37145	30301	24691	24703	42294	42294					0.009719842619801966
MSVLCLKNW	9	Unmodified	_MSVLCLKNW_					0	0	0			REV__nc|ENSG00000291085|Q9H0A3|TMEM191A	REV__nc|ENSG00000291085|Q9H0A3|TMEM191A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	547.2788696289062	2	547.28028	1092.54601	0.1543	8.4446E-05	-0.94485	-0.0005171	-0.79055	-0.00043265	547.2795816099393	26.806	0.80088	26.847	26.577	27.378	0.040834					51	26	3	0	0	0	0.74721	1	1146	1146		37.159	1.5408	1	154920	+		37146	30301	24692	24704	42295	42295					0.0034363121612841496
MSVPVAPKK	9	Unmodified	_MSVPVAPKK_					0	0	0		ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.78533935546875	2	478.783513	955.552473	1.6863	0.00080739	1.8292	0.00087578	3.5155	0.0016832	478.78443593268145	92.331	1.6378	92.266	91.688	93.326	-0.06414					85	38	3	0	0	0	0.64922	1	9769	9769		44.117	6.9577	1	793300			37147	3843	24693	24705	42296	42296					0.0729189243915016
MSVPVAPKK	9	Unmodified	_MSVPVAPKK_					0	0	0		ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	478.783513	955.552473	-0.98121	-0.00046979	6.8632	0.003286	5.882	0.0028162	478.7857916206205	92.576	2.3382	92.576	91.633	93.971	0	0.20525	0.0031658	NaN	44.117	123	53	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	417180			37148	3843	24693	24705							0.0729189243915016
MSVPVAPKK	9	Unmodified	_MSVPVAPKK_					0	0	0		ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	478.783513	955.552473	1.8047	0.00086408	3.046	0.0014584	4.8508	0.0023225	478.7844507492466	91.942	1.5652	92.391	91.714	93.279	0.44958	0.019867	-0.00048941	NaN	44.117	57	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	267620			37149	3843	24693	24705							0.0729189243915016
MSVPVAPKK	9	Unmodified	_MSVPVAPKK_					0	0	0		ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	478.783513	955.552473	-1.596	-0.00076413	6.7755	0.003244	5.1795	0.0024799	478.7861624758841	92	2.2984	92.463	91.155	93.453	0.46249	0.091287	0.0030818	NaN	44.117	80	54	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	326870			37150	3843	24693	24705							0.0729189243915016
MSVTLCNYT	9	Unmodified	_MSVTLCNYT_					0	0	0			REV__ENST00000486327.6_1_19:47880370-47884327:+|nuORF	REV__ENST00000486327.6_1_19:47880370-47884327:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.31396484375	2	516.230453	1030.44635	0.80131	0.00041366	-2.6832	-0.0013851	-1.8819	-0.00097147	516.2297277214618	98.898	0.2115	99.055	98.903	99.115	0.15659					6	4	2	0	0	0	0.20789	1	10279	10279		39.253	17.293	1	71237	+		37151	27548	24694	24706	42297	42297					-0.06765231188478538
MSVVRCSVKIR	11	Unmodified	_MSVVRCSVKIR_					0	0	0		ENST00000474037.5_1_19:53885824-53886199:+|nuORF	ENST00000474037.5_1_19:53885824-53886199:+|nuORF	ENST00000474037.5_1_19:53885824-53886199:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	639.3612670898438	2	639.362667	1276.71078	1.5496	0.00099077	-0.99429	-0.00063571	0.55533	0.00035506	639.3619128898014	110.84	0.76687	110.87	110.48	111.25	0.031738					31	23	2	0	0	0	0.72106	1	12126	12126		28.081	1.3886	1	154150			37152	12297	24695	24707	42298	42298					0.08349443355928088
MSYDNNPYIR	10	Unmodified	_MSYDNNPYIR_					0	0	0		nc|ENSG00000130635|P20908-2|COL5A1;ENSG00000130635|ENST00000371817|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	637.314208984375	2	636.787512	1271.56047	-0.29768	-0.00018956	-0.15102	-9.6169E-05	-0.44871	-0.00028573	636.7873904555638	64.135	0.55499	64.522	64.265	64.82	0.3868					16	12	2	0	0	0	0.37624	1	6954	6954		19.997	0.89325	1	86653			37153	3662	24696	24708	42299	42299					-0.06444625102039936
MSYRRQKRW	9	Unmodified	_MSYRRQKRW_					0	0	0		ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X;nc|ENSG00000114374|O00507-2|USP9Y;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;ENSG00000114374|ENST00000338981|USP9Y	ENSG00000124486|ENST00000378308|USP9X	ENSG00000124486|ENST00000378308|USP9X	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.9039611816406	3	437.568141	1309.68259	1.4101	0.000617	2.4788	0.0010846	3.8889	0.0017016	437.56904166000027	34.256	0.49355	34.561	34.324	34.817	0.30495					31	11	4	0	0	0	0.77696	1	2543	2543		31.53	0.96095	1	292980			37154	3334	24697	24709	42300	42300					0.04013881490845961
MTDASCDMCIV	11	Unmodified	_MTDASCDMCIV_					0	0	0			REV__nc|ENSG00000154027|Q9Y6K8-3|AK5	REV__nc|ENSG00000154027|Q9Y6K8-3|AK5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.7221069335938	2	594.72382	1187.43309	-0.14074	-8.3702E-05	-2.4794	-0.0014746	-2.6201	-0.0015583	594.7222857294024	79.63	2.5375	80.046	79.572	82.109	0.41621					126	60	3	0	0	0	0.68378	2	9104	9104;9128		34.173	3.8548	1	4289000	+		37155	20366	24698	24710	42301;42302	42301					-0.15313173354411447
MTDEVNDPSLT	11	Unmodified	_MTDEVNDPSLT_					0	0	0		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.2664184570312	2	611.268818	1220.52308	-0.22947	-0.00014027	-2.3686	-0.0014478	-2.598	-0.0015881	611.2672636615696	56.911	0.716	57.308	56.942	57.658	0.39672					31	16	3	0	0	0	0.45515	1	5889	5889		55.084	0.3076	1	691090			37156	8311	24699	24711	42303	42303					-0.07835761158298737
MTDIISIG	8	Unmodified	_MTDIISIG_					0	0	0		nc|ENSG00000120160|Q9NQ60-3|EQTN;ENSG00000120160|ENST00000380032|EQTN	nc|ENSG00000120160|Q9NQ60-3|EQTN	nc|ENSG00000120160|Q9NQ60-3|EQTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	425.2220153808594	2	425.222954	848.431355	-1.1718	-0.00049826	-1.2805	-0.00054449	-2.4523	-0.0010428	425.2222867734936	88.655	1.3102	88.655	88.249	89.559	0					69	30	3	0	0	0	0.86288	1	8536	8536		26.796	1.3459	1	896950			37157	3116	24700	24712	42304	42304					0.0010764500584627967
MTDITKVIQY	10	Oxidation (M)	_M(Oxidation (M))TDITKVIQY_		M(1)TDITKVIQY		M(55)TDITKVIQY	0	0	1			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|86|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|86|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	614.3200073242188	2	614.318114	1226.62167	-0.55786	-0.0003427	-1.967	-0.0012084	-2.5249	-0.0015511	614.3167801286451	72.873	0.51033	72.873	72.597	73.107	0					33	21	2	0	0	0	0.51302	1	6550	6550		54.776	16.965	1	122680	+		37158	29591	24701	24713	42305	42305		430			0.017428868774004513
MTDITKVIQY	10	Oxidation (M)	_M(Oxidation (M))TDITKVIQY_					0	0	1			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|86|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|86|2|sense	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	614.318114	1226.62167	-0.55786	-0.0003427	-1.967	-0.0012084	-2.5249	-0.0015511	614.3167801286451	72.873	0.51033	72.873	72.597	73.107	0	0.13003	0.00063355	NaN	54.776	33	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122680	+		37159	29591	24701	24713				430			0.017428868774004513
MTDITKVIQY	10	Oxidation (M)	_M(Oxidation (M))TDITKVIQY_					0	0	1			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|86|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|86|2|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	614.318114	1226.62167	0.6581	0.00040428	-3.942	-0.0024216	-3.2839	-0.0020174	614.3154899514485	72.482	0.46031	72.613	72.251	72.711	0.13063	-0.13003	-0.001793	NaN	54.776	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63156	+		37160	29591	24701	24713				430			0.017428868774004513
MTDVGLVA	8	Unmodified	_MTDVGLVA_					0	0	0			REV__ENST00000314728.9_1_17:19237570-19238089:+|nuORF	REV__ENST00000314728.9_1_17:19237570-19238089:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.20880126953125	2	403.209847	804.40514	-0.60775	-0.00024505	-1.7885	-0.00072113	-2.3962	-0.00096618	403.2090521764512	85.615	1.3902	86.062	85.664	87.054	0.44736					79	33	4	0	0	0	0.82464	1	10043	10043		21.702	0	1	1223100	+		37161	24936	24702	24714	42306	42306					-0.004886241656436141
MTEDVYFPK	9	Unmodified	_MTEDVYFPK_					0	0	0		ENSG00000107968|ENST00000263056|MAP3K8;nc|ENSG00000107968|P41279-2|MAP3K8	ENSG00000107968|ENST00000263056|MAP3K8	ENSG00000107968|ENST00000263056|MAP3K8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	565.2633056640625	2	565.26535	1128.51615	-0.8423	-0.00047612	-3.4052	-0.0019249	-4.2475	-0.002401	565.2632207445736	42.281	0.76114	42.252	41.952	42.713	-0.029461					34	18	3	0	0	0	0.18601	1	3152	3152		76.774	2.5191	1	457480			37162	2385	24703	24715	42307	42307					-0.04297029248209583
MTEQRSSIPP	10	Unmodified	_MTEQRSSIPP_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|64|2|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|64|2|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|64|2|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8182983398438	2	573.284605	1144.55466	-0.68852	-0.00039472	3.9699	0.0022759	3.2814	0.0018811	573.2867934075646	36.158	0.49905	36.167	35.935	36.434	0.0092812					18	10	2	0	0	0	0.37624	1	2302	2302		36.447	3.6343	1	103840			37163	14694	24704	24716	42308	42308					-0.011837236136898355
MTEWVGSQYL	10	Unmodified	_MTEWVGSQYL_					0	0	0		ENST00000463882.1_1_2:179314855-179315757:-|nuORF	ENST00000463882.1_1_2:179314855-179315757:-|nuORF	ENST00000463882.1_1_2:179314855-179315757:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5648193359375	3	405.190113	1212.54851	-1.578	-0.00063939	-1.0273	-0.00041625	-2.6053	-0.0010556	405.52537910169406	60.877	0.12015	60.877	60.802	60.923	0					7	4	2	0	0	0	0.37624	1	5336	5336		21.686	3.8526	1	16748			37164	12079	24705	24717	42309	42309					-0.049262418451917256
MTFSIDLSYR	10	Unmodified	_MTFSIDLSYR_					0	0	0		ENST00000273347.9_1_3:101540832-101540874:+|nuORF	ENST00000273347.9_1_3:101540832-101540874:+|nuORF	ENST00000273347.9_1_3:101540832-101540874:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	617.3046875	2	616.802631	1231.59071	-0.010546	-6.505E-06	0.80927	0.00049916	0.79873	0.00049266	616.8025148850035	30.489	0.70992	30.514	30.256	30.966	0.025013					35	21	2	0	0	0	0.85466	1	1609	1609		20.947	0.95016	1	71476			37165	9578	24706	24718	42310	42310					-0.01582266436844293
MTGGRGQH	8	Unmodified	_MTGGRGQH_					0	0	0			REV__ENST00000580580.1_1_18:74694260-74695843:+|nuORF	REV__ENST00000580580.1_1_18:74694260-74695843:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1993408203125	2	422.198136	842.381719	0.088661	3.7433E-05	1.418	0.00059866	1.5066	0.0006361	422.198858438519	84.305	3.2598	84.752	82.851	86.111	0.44736					161	79	3	0	0	0	0.86288	1	9840	9840		26.796	1.3459	1	1051400	+		37166	29039	24707	24719	42311	42311					-0.045776251595953
MTGKKLPP	8	Unmodified	_MTGKKLPP_					0	0	0		ENSG00000100811|ENST00000262238|YY1;ENSG00000179059|ENST00000326866|ZFP42	ENSG00000100811|ENST00000262238|YY1	ENSG00000100811|ENST00000262238|YY1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.2542419433594	2	436.257131	870.499709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.63	1	112.6	112.1	113.1	-0.032333								0	0	0	0.29344	1	12015	12015		31.955	2.1133	1				37167	1872	24708	24720	42312	42312					0.05927934376336452
MTGQPLPK	8	Unmodified	_MTGQPLPK_					0	0	0			REV__ENSG00000156413|ENST00000318336|FUT6	REV__ENSG00000156413|ENST00000318336|FUT6	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.25592041015625	2	436.238938	870.463324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.44	1	111.38	110.88	111.88	-0.059937								0	0	0	0.31091	1	12127	12127		47.916	7.343	1		+		37168	20484	24709	24721	42313	42313					0.02291057479635583
MTHLIKISRI	10	Unmodified	_MTHLIKISRI_					0	0	0		nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8;ENSG00000124721|ENST00000327475|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2445068359375	3	404.581276	1210.722	2.5442	0.0010293	1.0273	0.00041562	3.5715	0.001445	404.5815915077912	30.915	0.71748	30.904	30.626	31.344	-0.010656					46	17	3	0	0	0	0.37624	1	1661	1661		36.318	7.1476	1	137840			37169	3354	24710	24722	42314	42314					0.12506588721726075
MTIAEACQKS	10	Unmodified	_MTIAEACQKS_					0	0	0		ENSG00000181234|ENST00000435159|TMEM132C	ENSG00000181234|ENST00000435159|TMEM132C	ENSG00000181234|ENST00000435159|TMEM132C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.4900512695312	2	541.254459	1080.49437	0.83992	0.00045461	-4.1058	-0.0022223	-3.2659	-0.0017677	541.2522103007827	36.756	1.0004	37.242	36.619	37.619	0.48581					30	23	2	0	0	0	0.37624	1	2951	2951		24.519	0	1	200010			37170	7378	24711	24723	42315	42315					-0.04266157268443749
MTKRKSELQ	9	Unmodified	_MTKRKSELQ_					0	0	0			REV__ENSG00000167880|ENST00000301607|EVPL	REV__ENSG00000167880|ENST00000301607|EVPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8088989257812	2	560.81079	1119.60703	-0.087449	-4.9042E-05	-2.741	-0.0015372	-2.8284	-0.0015862	560.8091081677871	31.44	0.77379	31.52	31.209	31.983	0.079836					46	17	4	0	0	0	0.18601	1	2139	2139		76.774	2.5191	1	979640	+		37171	21433	24712	24724	42316	42316					0.052008595199367846
MTKTIRLSQ	9	Unmodified	_MTKTIRLSQ_					0	0	0		L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|39|2|sense	L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|39|2|sense	L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|39|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.784912109375	2	539.307884	1076.60121	-0.64231	-0.0003464	-1.0261	-0.00055339	-1.6684	-0.00089979	539.3050584160003	68.492	0.28831	69.039	68.866	69.154	0.54693					8	6	2	0	0	0	0.20789	1	7548	7548		25.574	6.2141	1	121550			37172	14633	24713	24725	42317	42317					0.06597761008265479
MTLAAILVSL	10	Unmodified	_MTLAAILVSL_					0	0	0			REV__ENST00000485978.1_1_9:136338979-136343630:-|nuORF;REV__nc|ENSG00000160326|Q9UGQ3-2|SLC2A6	REV__nc|ENSG00000160326|Q9UGQ3-2|SLC2A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3150634765625	2	516.312103	1030.60965	1.791	0.00092474	1.8914	0.00097654	3.6824	0.0019013	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.85466	1	12146	12146		20.947	1.8434	1	24820000	+		37173	27536;29969	24714	24726	42318	42318					0.09557314924882121
MTLLIQIHH	9	Oxidation (M)	_M(Oxidation (M))TLLIQIHH_		M(1)TLLIQIHH		M(53)TLLIQIHH	0	0	1		ENSG00000101353|ENST00000343811|MROH8;nc|ENSG00000101353|Q9H579-2|MROH8	ENSG00000101353|ENST00000343811|MROH8	ENSG00000101353|ENST00000343811|MROH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3126220703125	2	561.310426	1120.6063	0.39133	0.00021966	-0.16973	-9.5274E-05	0.22159	0.00012438	561.3093913762153	55.356	2.8595	55.925	53.691	56.55	0.56836					96	69	3	0	0	0	0.47272	1	5725	5725		53.351	7.3792	1	1532900			37174	1937	24715	24727	42319	42319		39			0.050820648708622684
MTLLLKDLA	9	Unmodified	_MTLLLKDLA_					0	0	0			REV__nc|ENSG00000204370|O14521-3|SDHD	REV__nc|ENSG00000204370|O14521-3|SDHD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.30572509765625	2	509.304278	1016.594	0.38214	0.00019463	2.5317	0.0012894	2.9139	0.001484	509.30545060509706	93	1.7659	93.046	92.369	94.135	0.045448					129	41	4	0	0	0	0.71772	1	9782	9782		39.253	5.0803	1	3009900	+		37175	30160	24716	24728	42320	42320					0.08637028407827074
MTLPRNIN	8	Unmodified	_MTLPRNIN_					0	0	0			REV__nc|ENSG00000107485|P23771|GATA3	REV__nc|ENSG00000107485|P23771|GATA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.7588195800781	2	479.760569	957.506586	-0.7953	-0.00038155	-3.1946	-0.0015327	-3.9899	-0.0019142	479.75889137645663	46.655	0.71327	46.626	46.312	47.025	-0.028782					25	16	2	0	0	0	0.87259	1	3843	3843		58.782	10.866	1	190400	+		37176	17659	24717	24729	42321	42321					0.026132472569202037
MTLSSLTLFV	10	Unmodified	_MTLSSLTLFV_					0	0	0		ENSG00000172938|ENST00000309106|MRGPRD	ENSG00000172938|ENST00000309106|MRGPRD	ENSG00000172938|ENST00000309106|MRGPRD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	556.3065185546875	2	556.307018	1110.59948	-1.4316	-0.00079643	2.9264	0.001628	1.4948	0.00083156	556.308699276366	90.429	3.4878	90.605	89.562	93.05	0.17579					165	82	3	0	0	0	0.84112	1	8965	8965		37.159	0	1	466610			37177	6806	24718	24730	42322	42322					0.04860707199645731
MTLVKLCQLPK	11	Unmodified	_MTLVKLCQLPK_					0	0	0			REV__ENSG00000132361|ENST00000651024|CLUH	REV__ENSG00000132361|ENST00000651024|CLUH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	637.3688354492188	2	637.372169	1272.72979	-0.10165	-6.4787E-05	-2.5348	-0.0016156	-2.6365	-0.0016804	637.3704665370327	105.92	2.1512	105.89	105.23	107.38	-0.025146					153	50	4	0	0	0	0.68532	1	11461	11461		33.922	6.8743	1	1622600	+		37178	18998	24719	24731	42323	42323					0.10432979926963526
MTNGLCIWL	9	Oxidation (M)	_M(Oxidation (M))TNGLCIWL_		M(1)TNGLCIWL		M(59)TNGLCIWL	0	0	1		nc|ENSG00000232535|P0DN80|OR5H8	nc|ENSG00000232535|P0DN80|OR5H8	nc|ENSG00000232535|P0DN80|OR5H8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.7578735351562	2	533.756638	1065.49872	0.78849	0.00042086	2.8777	0.001536	3.6662	0.0019568	533.7579263674221	23.484	0.56159	23.102	22.845	23.407	-0.38178					25	12	3	0	0	0	0.38563	1	1040	1040		58.782	9.3404	1	159660			37179	15271	24720	24732	42324	42324		221			-0.03140648054863959
MTNLPGILVL	10	Unmodified	_MTNLPGILVL_					0	0	0		nc|ENSG00000015520|Q9UHC9|NPC1L1;nc|ENSG00000015520|Q9UHC9-4|NPC1L1;nc|ENSG00000015520|Q9UHC9-2|NPC1L1;ENSG00000015520|ENST00000381160|NPC1L1	nc|ENSG00000015520|Q9UHC9|NPC1L1	nc|ENSG00000015520|Q9UHC9|NPC1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	535.81494140625	2	535.817553	1069.62055	3.1559	0.001691	-3.1467	-0.001686	0.0092177	4.939E-06	535.8161013513314	99.289	1.4852	99.235	98.78	100.26	-0.053741					66	34	3	0	0	0	0.86471	1	10723	10723		30.318	1.1682	1	505840			37180	14740	24721	24733	42325	42325					0.08852717299168944
MTPEVLAET	9	Unmodified	_MTPEVLAET_					0	0	0		ENST00000399325.2_1_X:133406364-133406679:+|nuORF	ENST00000399325.2_1_X:133406364-133406679:+|nuORF	ENST00000399325.2_1_X:133406364-133406679:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7437744140625	2	495.74425	989.473948	-0.19473	-9.6537E-05	0.24149	0.00011972	0.046755	2.3179E-05	495.74414577371067	73.649	0.69046	74.208	73.984	74.674	0.55891					34	17	3	0	0	0	0.51307	1	8309	8309		51.335	10.557	1	571520			37181	11201	24722	24734	42326	42326					-0.021210046566011442
MTPGLGHR	8	Oxidation (M)	_M(Oxidation (M))TPGLGHR_		M(1)TPGLGHR		M(50)TPGLGHR	0	0	1		ENSG00000221843|ENST00000447166|C2orf16;nc|ENSG00000221843|Q68DN1|SPATA31H1	ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.722412109375	2	442.723987	883.433421	-0.33299	-0.00014742	-2.7575	-0.0012208	-3.0904	-0.0013682	442.7224617951711	27.796	1.1706	27.758	27.434	28.605	-0.038523					64	27	3	0	0	0	0.92973	1	1345	1345		50.025	9.4519	1	142800			37182	8672	24723	24735	42327	42327					-0.012958814656940376
MTPNWEQKD	9	Unmodified	_MTPNWEQKD_					0	0	0			REV__nc|ENSG00000145919|Q96IK1-2|BOD1	REV__nc|ENSG00000145919|Q96IK1-2|BOD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.7569580078125	2	574.755681	1147.49681	0.44449	0.00025548	1.6211	0.00093174	2.0656	0.0011872	574.7564893349348	32.159	0.73095	32.266	31.973	32.704	0.10707					44	16	4	0	0	0	0.64922	1	2265	2265		44.117	0	1	702070	+		37183	19976	24724	24736	42328	42328					-0.07103985539129098
MTPPPAPD	8	Unmodified	_MTPPPAPD_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.19390869140625	2	413.194196	824.37384	0.36856	0.00015229	-1.5039	-0.00062141	-1.1354	-0.00046913	413.19353569569154	84.288	3.3037	84.723	83.664	86.967	0.43538					144	80	2	0	0	0	0.87479	1	9755	9755		30.504	2.2494	1	9340100	+		37184	22690	24725	24737	42329	42329					-0.045371971997496985
MTRALKVLLY	10	Unmodified	_MTRALKVLLY_					0	0	0			REV__chr5:69579105-69579757|14|15.71|0.16|6.6|+|0|None,GTF2H2C|1	REV__chr5:69579105-69579757|14|15.71|0.16|6.6|+|0|None,GTF2H2C|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3662719726562	2	604.365201	1206.71585	-1.2751	-0.0007706	3.3813	0.0020435	2.1062	0.0012729	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.85981	1	11448	11448		35.152	11.629	1	103250000	+		37185	15860	24726	24738	42330	42330					0.12076070490206803
MTRAWGVGIL	10	Unmodified	_MTRAWGVGIL_					0	0	0		ENST00000416970.5_1_9:139620852-139621526:-|nuORF	ENST00000416970.5_1_9:139620852-139621526:-|nuORF	ENST00000416970.5_1_9:139620852-139621526:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.3060913085938	2	552.305144	1102.59573	-0.69245	-0.00038245	3.2977	0.0018214	2.6053	0.0014389	552.3068506755722	92.408	2.4109	92.871	91.891	94.302	0.46249					185	56	4	0	0	0	0.86348	1	11053	11053		31.53	4.4825	1	607550			37186	11407	24727	24739	42331	42331					0.04854082216434108
MTRGAASR	8	Unmodified	_MTRGAASR_					0	0	0			REV__nc|ENSG00000006744|Q9BQ52-4|ELAC2	REV__nc|ENSG00000006744|Q9BQ52-4|ELAC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	425.2218933105469	2	425.221611	848.42867	1.1463	0.00048741	-0.72479	-0.0003082	0.42147	0.00017922	425.22118983935917	88.495	1.5344	88.421	87.942	89.477	-0.074005					90	36	3	0	0	0	0.8621	1	9199	9199		26.693	1.1189	1	1170300	+		37187	16112	24728	24740	42332	42332					-0.0016076560846158827
MTRLWRSR	8	Unmodified	_MTRLWRSR_					0	0	0			REV__ENST00000377693.4_1_19:46651525-46663958:+|nuORF	REV__ENST00000377693.4_1_19:46651525-46663958:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8299560546875	2	553.30601	1104.59747	0.75194	0.00041605	4.3433	0.0024032	5.0952	0.0028192	553.3084130607555	89.574	0.94576	89.726	88.97	89.915	0.1519					26	21	2	0	0	0	0.4196	1	8848	8848		37.159	6.6555	1	75000	+		37188	25871	24729	24741	42333	42333					0.04935136025051179
MTRNRKIAS	9	Unmodified	_MTRNRKIAS_					0	0	0		ENST00000371021.4_1_10:99080110-99080479:+|nuORF	ENST00000371021.4_1_10:99080110-99080479:+|nuORF	ENST00000371021.4_1_10:99080110-99080479:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8065185546875	2	538.8033	1075.59205	2.2674	0.0012217	4.0273	0.0021699	6.2947	0.0033916	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.69624	1	9500	9500		40.778	7.9657	1	835060			37189	10655	24730	24742	42334	42334					0.05727412442570312
MTRRARRRG	9	Unmodified	_MTRRARRRG_					0	0	0			REV__ENST00000352684.2_1_8:356980-385646:+|nuORF	REV__ENST00000352684.2_1_8:356980-385646:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.8550415039062	2	580.338707	1158.66286	-1.3535	-0.00078551	0.20882	0.00012119	-1.1447	-0.00066432	580.3388305186784	101.59	0.49892	101.75	101.54	102.04	0.15505					16	11	2	0	0	0	0.20789	1	10601	10601		19.104	0	1	89277	+		37190	25348	24731	24743	42335	42335					0.08987550270762767
MTSHQPRPLG	10	Unmodified	_MTSHQPRPLG_					0	0	0		ENST00000372242.7_1_1:45101583-45102057:-|nuORF	ENST00000372242.7_1_1:45101583-45102057:-|nuORF	ENST00000372242.7_1_1:45101583-45102057:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.28564453125	2	562.287482	1122.56041	0.51987	0.00029231	-2.0999	-0.0011807	-1.58	-0.00088842	562.2860653495065	63.228	0.96156	63.782	63.382	64.343	0.5545					53	22	3	0	0	0	0.77314	1	6849	6849		40.778	0.71999	1	538600			37191	10692	24732	24744	42336	42336					0.004034196886095742
MTSKPCYYTQ	10	Unmodified	_MTSKPCYYTQ_					0	0	0		ENSG00000206043|ENST00000579455|C18orf63	ENSG00000206043|ENST00000579455|C18orf63	ENSG00000206043|ENST00000579455|C18orf63	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.2698974609375	2	611.267567	1220.52058	0.78636	0.00048067	-1.1155	-0.00068185	-0.32911	-0.00020118	611.266843148683	56.824	0.6762	57.379	57.049	57.725	0.55512					32	15	3	0	0	0	0.73395	1	5901	5901		42.864	0.46813	1	790100			37192	8550	24733	24745	42337	42337					-0.08085888096979943
MTVEVLGT	8	Unmodified	_MTVEVLGT_					0	0	0		ENST00000483824.5_1_1:40420832-40434017:+|nuORF;nc|ENSG00000168389|Q8NA29-3|MFSD2A;ENSG00000168389|ENST00000372811|MFSD2A;nc|ENSG00000168389|Q8NA29|MFSD2A;ENST00000480630.5_1_1:40430901-40433516:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.2219543457031	2	425.222954	848.431355	-0.18345	-7.8007E-05	-2.4282	-0.0010325	-2.6117	-0.0011105	425.22178484975404	88.514	1.3777	88.582	88.093	89.471	0.068161					86	32	4	0	0	0	0.85277	1	8989	8989		25.45	3.7478	1	955500			37193	12524	24734	24746	42338	42338					0.00107645005834911
MTVEVLGT	8	Unmodified	_MTVEVLGT_					0	0	0		ENST00000483824.5_1_1:40420832-40434017:+|nuORF;nc|ENSG00000168389|Q8NA29-3|MFSD2A;ENSG00000168389|ENST00000372811|MFSD2A;nc|ENSG00000168389|Q8NA29|MFSD2A;ENST00000480630.5_1_1:40430901-40433516:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.2222595214844	2	425.222954	848.431355	-1.8628	-0.00079212	-0.90885	-0.00038646	-2.7717	-0.0011786	425.2224549524542	88.246	1.2975	88.415	87.955	89.252	0.16923					79	30	4	0	0	0	0.84341	1	8695	8695		24.203	1.1603	1	953360			37194	12524	24734	24746	42339	42339					0.00107645005834911
MTVIVCVPP	9	Unmodified	_MTVIVCVPP_					0	0	0			REV__ENST00000232375.7_1_3:48556966-48557164:-|nuORF	REV__ENST00000232375.7_1_3:48556966-48557164:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.7588195800781	2	479.758649	957.502746	0.71712	0.00034405	-0.73757	-0.00035386	-0.020449	-9.8103E-06	479.75815181939663	76.043	0.78616	76.438	76.077	76.863	0.39507					54	18	4	0	0	0	0.5393	1	8633	8633		50.025	5.9077	1	460820	+		37195	24199	24735	24747	42340	42340					0.022294414388397854
MTVRSWPG	8	Unmodified	_MTVRSWPG_					0	0	0			REV__ENST00000437877.1_2_7:1976496-1979773:-|nuORF	REV__ENST00000437877.1_2_7:1976496-1979773:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2292175292969	2	467.234187	932.453822	-0.45838	-0.00021417	-1.9039	-0.00088959	-2.3623	-0.0011038	467.23359025373514	64.723	2.0657	65.109	64.482	66.548	0.38615					153	52	5	0	0	0	0.9283	1	6951	6951		49.442	5.8155	1	8112800	+		37196	26715	24736	24748	42341	42341					-0.01510710805882809
MTVWLCPL	8	Oxidation (M)	_M(Oxidation (M))TVWLCPL_		M(1)TVWLCPL		M(52)TVWLCPL	0	0	1			REV__ENST00000258198.6_1_16:66770018-66770051:-|nuORF	REV__ENST00000258198.6_1_16:66770018-66770051:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.7421875	2	489.742999	977.471446	-0.19835	-9.7143E-05	-0.050428	-2.4697E-05	-0.24878	-0.00012184	489.7428935831139	78.737	0.84704	79.3	78.952	79.799	0.56332					46	19	3	0	0	0	0.93529	1	9020	9020		52.299	9.8247	1	912380	+		37197	24352	24737	24749	42342	42342					-0.01819131595266299
MTYEGKGETC	10	Unmodified	_MTYEGKGETC_					0	0	0			REV__ENSG00000168827|ENST00000486715|GFM1	REV__ENSG00000168827|ENST00000486715|GFM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3401489257812	2	559.728274	1117.442	2.2259	0.0012459	2.4921	0.0013949	4.718	0.0026408	559.7291418307868	101.93	0.31409	102.19	101.96	102.27	0.26323					10	7	2	0	0	0	0.37624	1	12334	12334		41.427	14.631	1	97957	+		37198	21526	24738	24750	42343	42343					-0.11202740402018208
MTYMFLTKK	9	Unmodified	_MTYMFLTKK_					0	0	0			REV__ENST00000412830.7_1_12:108086870-108090316:+|nuORF	REV__ENST00000412830.7_1_12:108086870-108090316:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	581.8037109375	2	581.803588	1161.59262	-0.84342	-0.00049071	1.3467	0.00078354	0.50333	0.00029284	581.8042209078138	64.934	0.90569	64.934	64.471	65.377	0					126	41	4	0	0	0	0.15928	1	5734	5734		82.305	0.064519	1	1021200	+		37199	26388	24739	24751	42344	42344					0.018290710474047955
MTYMFLTKK	9	Unmodified	_MTYMFLTKK_					0	0	0			REV__ENST00000412830.7_1_12:108086870-108090316:+|nuORF	REV__ENST00000412830.7_1_12:108086870-108090316:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.8035278320312	2	581.803588	1161.59262	-0.85723	-0.00049874	1.1347	0.00066018	0.27748	0.00016144	581.8041359545632	64.921	1.0467	64.925	64.44	65.486	0.0046997					94	34	4	0	0	0	0.057432	1	6084	6084		104.75	19.831	1	1939500	+		37200	26388	24739	24751	42345	42345					0.018290710474047955
MTYMFLTKK	9	Unmodified	_MTYMFLTKK_					0	0	0			REV__ENST00000412830.7_1_12:108086870-108090316:+|nuORF	REV__ENST00000412830.7_1_12:108086870-108090316:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	581.803588	1161.59262	-1.3384	-0.00077869	1.6094	0.00093636	0.27099	0.00015766	581.804412877013	64.652	1.1795	64.679	64.1	65.279	0.027138	-0.094482	0.00098807	NaN	104.75	99	35	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1830900	+		37201	26388	24739	24751							0.018290710474047955
MTYSIIILV	9	Unmodified	_MTYSIIILV_					0	0	0			REV__nc|ENSG00000176748|P0C646|OR52Z1P	REV__nc|ENSG00000176748|P0C646|OR52Z1P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	527.305908203125	2	526.806654	1051.59875	-0.10039	-5.2887E-05	-3.5117	-0.00185	-3.6121	-0.0019029	526.807278834427	99.072	1.5943	99.295	98.744	100.34	0.22263					122	37	5	0	0	0	0.78058	1	10355	10355		30.504	1.3336	1	2555900	+		37202	30054	24740	24752	42346	42346					0.07501912550605994
MVAAAMAHRG	10	Unmodified	_MVAAAMAHRG_					0	0	0		ENST00000591688.5_1_19:13875372-13879601:+|nuORF;nc|ENSG00000037757|Q9BV20-2|MRI1;ENSG00000037757|ENST00000040663|MRI1	ENST00000591688.5_1_19:13875372-13879601:+|nuORF	ENST00000591688.5_1_19:13875372-13879601:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.7539367675781	2	507.752221	1013.48989	0.84789	0.00043052	1.0259	0.00052089	1.8738	0.00095141	507.7524998605722	62.525	1.3198	63.08	62.559	63.879	0.55449					81	30	4	0	0	0	0.4094	1	6753	6753		63.306	13.865	1	1695100			37203	910	24741	24753	42347	42347					-0.0163157690068374
MVAGGRRSDQ	10	Unmodified	_MVAGGRRSDQ_					0	0	0			REV__ENST00000466831.2_1_13:24796959-24798912:+|nuORF	REV__ENST00000466831.2_1_13:24796959-24798912:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7680053710938	2	538.766914	1075.51928	-1.4978	-0.00080696	2.0203	0.0010885	0.52251	0.00028151	538.7675993359869	44.594	0.6071	45.438	45.184	45.791	0.84438					30	14	3	0	0	0	0.2575	1	4126	4126		77.318	9.8239	1	1867500	+		37204	22562	24742	24754	42348	42348					-0.015463413508541635
MVASFRLR	8	Unmodified	_MVASFRLR_					0	0	0		ENST00000451892.1_1_1:240307039-240307453:-|nuORF	ENST00000451892.1_1_1:240307039-240307453:-|nuORF	ENST00000451892.1_1_1:240307039-240307453:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.62884521484375	2	490.278929	978.543305	0.15784	7.7387E-05	1.5498	0.00075985	1.7077	0.00083724	490.27960327327145	16.944	0.25168	16.457	16.369	16.62	-0.48718					7	5	2	0	0	0	0.4196	1	192	192		23.042	0	1	39035			37205	11908	24743	24755	42349	42349					0.05317543873502473
MVASSFSH	8	Oxidation (M)	_M(Oxidation (M))VASSFSH_		M(1)VASSFSH		M(47)VASSFSH	0	0	1		nc|ENSG00000170190|O15375-2|SLC16A5;ENSG00000170190|ENST00000329783|SLC16A5	nc|ENSG00000170190|O15375-2|SLC16A5	nc|ENSG00000170190|O15375-2|SLC16A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.1929016113281	2	441.194728	880.374903	1.0902	0.00048098	2.3748	0.0010478	3.465	0.0015287	441.1960280174818	97.831	1.1968	98.217	97.723	98.92	0.38548					53	28	3	0	0	0	0.92176	1	11791	11791		46.766	6.1938	1	469230			37206	6565	24744	24756	42350	42350		111			-0.07006982830819197
MVCRIWRAI	9	Unmodified	_MVCRIWRAI_					0	0	0		nc|ENSG00000142733|O95382-3|MAP3K6;ENSG00000142733|ENST00000357582|MAP3K6;ENST00000470890.1_1_1:27681884-27683265:-|nuORF	nc|ENSG00000142733|O95382-3|MAP3K6	nc|ENSG00000142733|O95382-3|MAP3K6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.3150024414062	2	574.314989	1146.61542	-0.46934	-0.00026955	-1.1314	-0.00064975	-1.6007	-0.0009193	574.3141583052528	49.619	0.65346	50.079	49.789	50.443	0.45983					28	15	3	0	0	0	0.64922	1	4843	4843		44.117	8.9648	1	992820			37207	4582	24745	24757	42351	42351					0.047981349555357156
MVCRIWRAI	9	Unmodified	_MVCRIWRAI_					0	0	0		nc|ENSG00000142733|O95382-3|MAP3K6;ENSG00000142733|ENST00000357582|MAP3K6;ENST00000470890.1_1_1:27681884-27683265:-|nuORF	nc|ENSG00000142733|O95382-3|MAP3K6	nc|ENSG00000142733|O95382-3|MAP3K6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	574.314989	1146.61542	0.47809	0.00027457	-2.1756	-0.0012495	-1.6975	-0.00097492	574.3134910733241	49.464	0.56667	50.309	50.074	50.641	0.845	0.11484	-0.00066549	NaN	44.117	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	867550			37208	4582	24745	24757							0.047981349555357156
MVEELRMSLK	10	2 Oxidation (M)	_M(Oxidation (M))VEELRM(Oxidation (M))SLK_		M(1)VEELRM(1)SLK		M(75)VEELRM(75)SLK	0	0	2		nc|ENSG00000164418|Q13002-4|GRIK2;ENSG00000164418|ENST00000369134|GRIK2	nc|ENSG00000164418|Q13002-4|GRIK2	nc|ENSG00000164418|Q13002-4|GRIK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.325927734375	2	634.322873	1266.63119	0.12371	7.8469E-05	3.3179	0.0021046	3.4416	0.0021831	634.325003697221	59.4	2.1536	59.369	58.786	60.939	-0.030888					122	59	4	0	0	0	0.27582	1	5588	5588		75.043	11.509	1	2917300			37209	5965	24746	24758	42352	42352		103;104			0.008543318912870745
MVEQNFETDY	10	Unmodified	_MVEQNFETDY_					0	0	0			REV__ENST00000602812.5_2_X:73501635-73513318:-|nuORF	REV__ENST00000602812.5_2_X:73501635-73513318:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	638.2671508789062	2	638.263536	1274.51252	0.48196	0.00030762	2.4731	0.0015785	2.9551	0.0018861	638.2649310823937	27.073	0.42839	27.114	26.875	27.304	0.040834					32	13	3	0	0	0	0.85251	1	1210	1210		19.997	0.89325	1	80064	+		37210	29338	24747	24759	42353	42353					-0.11375743812709516
MVFVKVLTSCR	11	Unmodified	_MVFVKVLTSCR_					0	0	0		ENST00000470099.1_1_2:20884492-20885346:-|nuORF;ENST00000403006.6_1_2:20884492-20885346:-|nuORF	ENST00000470099.1_1_2:20884492-20885346:-|nuORF	ENST00000470099.1_1_2:20884492-20885346:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.361572265625	2	641.854144	1281.69373	7.1265	0.0045742	1.3543	0.00086923	8.4807	0.0054434	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.7342	1	13798	13798		25.574	2.9944	1	98705			37211	11247	24748	24760	42354	42354					0.06415522750126001
MVGHFIIP	8	Unmodified	_MVGHFIIP_					0	0	0			REV__nc|ENSG00000155363|Q9HCE1-2|MOV10	REV__nc|ENSG00000155363|Q9HCE1-2|MOV10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2537536621094	2	457.251849	912.489145	0.39374	0.00018004	2.6778	0.0012244	3.0716	0.0014045	457.25287569992605	31.678	1.0685	31.785	31.377	32.446	0.10707					47	24	3	0	0	0	0.88393	1	2179	2179		33.493	2.9893	1	574200	+		37212	20426	24749	24761	42355	42355					0.02939951721930356
MVGKKRIY	8	Unmodified	_MVGKKRIY_					0	0	0			REV__ENST00000396299.6_1_7:28858911-28859157:+|nuORF	REV__ENST00000396299.6_1_7:28858911-28859157:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.7955017089844	2	497.796955	993.579357	-1.5169	-0.00075511	-0.74462	-0.00037067	-2.2615	-0.0011258	497.7963799927103	49.017	1.345	49.017	48.626	49.971	0					75	31	3	0	0	0	0.82464	1	3837	3837		21.702	1.2205	1	491380	+		37213	26139	24750	24762	42356	42356					0.08231001050342002
MVGLALTVT	9	Unmodified	_MVGLALTVT_					0	0	0			REV__nc|ENSG00000017260|P98194-2|ATP2C1	REV__nc|ENSG00000017260|P98194-2|ATP2C1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.762939453125	2	452.762246	903.50994	-1.309	-0.00059268	3.8108	0.0017254	2.5017	0.0011327	452.76391630275526	39.719	0.69509	39.726	39.418	40.114	0.0065041					32	17	2	0	0	0	0.7932	1	2480	2480		25.45	3.7478	1	173870	+		37214	16219	24751	24763	42357	42357					0.0543249731092601
MVGWIMSIF	9	Oxidation (M)	_M(Oxidation (M))VGWIMSIF_		M(1)VGWIMSIF		M(34)VGWIM(-34)SIF	0	0	1		ENSG00000203685|ENST00000366788|STUM	ENSG00000203685|ENST00000366788|STUM	ENSG00000203685|ENST00000366788|STUM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.269287109375	2	550.269381	1098.52421	-0.17346	-9.5449E-05	-0.70906	-0.00039017	-0.88252	-0.00048562	550.2690081664308	78.916	0.76439	79.465	79.149	79.914	0.54945					33	17	3	0	0	0	0.49378	1	9056	9056		52.299	6.3472	2	803690			37215	8389	24752	24764	42358	42358		144			-0.021111735324438996
MVHELLGINN	10	Unmodified	_MVHELLGINN_					0	0	0		nc|ENSG00000136631|Q9NRW7-2|VPS45;ENSG00000136631|ENST00000644510|VPS45;ENST00000477558.1_1_1:150049710-150054979:+|nuORF	nc|ENSG00000136631|Q9NRW7-2|VPS45	nc|ENSG00000136631|Q9NRW7-2|VPS45	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.2938842773438	2	570.297516	1138.58048	-0.19522	-0.00011133	-3.3878	-0.001932	-3.583	-0.0020434	570.2954447589152	61.934	0.66319	61.964	61.679	62.342	0.029575					66	27	3	0	0	0	0.77314	1	5812	5812		40.778	0.20554	1	775280			37216	4123	24753	24765	42359	42359					0.01673170628623666
MVHKYLEKQWD	11	Unmodified	_MVHKYLEKQWD_					0	0	0			REV__nc|ENSG00000181220|Q6NUN9|ZNF746	REV__nc|ENSG00000181220|Q6NUN9|ZNF746	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.7889404296875	3	492.914983	1475.72312	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.52	1	61.074	60.574	61.574	0.55323								0	0	0	0.56276	1	6442	6442		17.833	0.6664	1		+		37217	22446	24754	24766	42360	42360					0.004287582999495498
MVHYLMVL	8	Oxidation (M)	_M(Oxidation (M))VHYLMVL_		M(1)VHYLMVL		M(50)VHYLM(-50)VL	0	0	1		nc|ENSG00000150625|P51674-3|GPM6A;nc|ENSG00000150625|P51674-2|GPM6A;ENSG00000150625|ENST00000393658|GPM6A;ENST00000507080.5_1_4:176556058-176562011:-|nuORF	nc|ENSG00000150625|P51674-3|GPM6A	nc|ENSG00000150625|P51674-3|GPM6A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.2643737792969	2	511.264099	1020.51364	0.37635	0.00019241	-1.198	-0.00061249	-0.82164	-0.00042007	511.2632935812329	65.926	0.48036	66.312	66.067	66.547	0.38582					15	11	2	0	0	0	0.94009	1	7187	7187		54.895	7.2372	2	181520			37218	5075	24755	24767	42361	42361					0.004208438131513503
MVHYLMVL	8	Oxidation (M)	_M(Oxidation (M))VHYLMVL_					0	0	1		nc|ENSG00000150625|P51674-3|GPM6A;nc|ENSG00000150625|P51674-2|GPM6A;ENSG00000150625|ENST00000393658|GPM6A;ENST00000507080.5_1_4:176556058-176562011:-|nuORF	nc|ENSG00000150625|P51674-3|GPM6A	nc|ENSG00000150625|P51674-3|GPM6A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	511.264099	1020.51364	0.51671	0.00026418	-1.6618	-0.0008496	-1.145	-0.00058542	511.26347989551164	65.784	0.54153	66.337	66.2	66.741	0.5526	0.012407	-0.00018751	NaN	54.895	26	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	241760			37219	5075	24755	24767							0.004208438131513503
MVICYSGIL	9	Oxidation (M)	_M(Oxidation (M))VICYSGIL_		M(1)VICYSGIL		M(80)VICYSGIL	0	0	1		nc|ENSG00000121807|P41597|CCR2;ENSG00000121807|ENST00000445132|CCR2;ENSG00000160791|ENST00000292303|CCR5	nc|ENSG00000121807|P41597|CCR2	nc|ENSG00000121807|P41597|CCR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7541198730469	2	507.753564	1013.49257	-0.78055	-0.00039633	-0.24485	-0.00012432	-1.0254	-0.00052065	507.75333135770444	62.615	1.2565	63.002	62.534	63.791	0.3878					81	28	4	0	0	0	0.17071	1	6749	6749		79.939	18.967	1	1463300			37220	14879	24756	24768	42362	42362		213			-0.013631662863872407
MVIDEVTLP	9	Unmodified	_MVIDEVTLP_					0	0	0		ENSG00000171806|ENST00000310392|METTL18	ENSG00000171806|ENST00000310392|METTL18	ENSG00000171806|ENST00000310392|METTL18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.77081298828125	2	508.770268	1015.52598	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.992	1	34.297	33.797	34.797	0.30494								0	0	0	0.42198	1	2507	2507		57.811	7.7867	1				37221	6712	24757	24769	42363	42363					0.018841587571614582
MVIISLCV	8	Unmodified	_MVIISLCV_					0	0	0		ENST00000447069.5_3_2:201677557-201677948:+|nuORF	ENST00000447069.5_3_2:201677557-201677948:+|nuORF	ENST00000447069.5_3_2:201677557-201677948:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	439.24810791015625	2	439.247917	876.481282	0.095444	4.1923E-05	1.3188	0.00057926	1.4142	0.00062119	439.2484825440132	31.741	0.55731	31.76	31.472	32.03	0.01836					32	12	4	0	0	0	0.92176	1	1729	1729		46.766	2.2354	1	113700			37222	11844	24758	24770	42364	42364					0.038100564101227974
MVIVVFLRVMF	11	Unmodified	_MVIVVFLRVMF_					0	0	0			REV__nc|ENSG00000181704|Q96EC8-2|YIPF6	REV__nc|ENSG00000181704|Q96EC8-2|YIPF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9321594238281	3	451.931029	1352.77126	0.73765	0.00033337	2.9056	0.0013131	3.6432	0.0016465	451.932241061631	98.904	2.3627	99.06	97.538	99.901	0.15659					136	54	4	0	0	0	0.76251	1	10234	10234		19.263	2.5453	1	302530	+		37223	22474	24759	24771	42365	42365					0.10898160686292613
MVKDVIGSY	9	Unmodified	_MVKDVIGSY_					0	0	0		ENSG00000182636|ENST00000649030|NDN	ENSG00000182636|ENST00000649030|NDN	ENSG00000182636|ENST00000649030|NDN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.26275634765625	2	506.26261	1010.51067	-1.452	-0.00073509	1.2481	0.00063188	-0.20388	-0.00010321	506.26325489455337	50.474	0.59516	50.474	50.182	50.777	0					27	14	3	0	0	0	0.33718	3	4039	4027;4039;4050		62.107	21.535	1	146590			37224	7466	24760	24772	42366;42367;42368	42367					0.005832919599697561
MVKGLINV	8	Unmodified	_MVKGLINV_					0	0	0			REV__ENSG00000103994|ENST00000564754|ZNF106	REV__ENSG00000103994|ENST00000564754|ZNF106	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2654113769531	2	437.264956	872.515359	2.8534	0.0012477	-1.6442	-0.00071895	1.2092	0.00052875	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.88915	1	1308	1308		35.201	1.6851	1	21873000	+		37225	17431	24761	24773	42369	42369					0.0740022089340755
MVKIIGSKH	9	Unmodified	_MVKIIGSKH_					0	0	0		ENSG00000162598|ENST00000371201|C1orf87	ENSG00000162598|ENST00000371201|C1orf87	ENSG00000162598|ENST00000371201|C1orf87	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.7992248535156	2	506.802237	1011.58992	-0.74295	-0.00037653	-0.89364	-0.0004529	-1.6366	-0.00082942	506.8017502066666	51.962	1.6193	51.975	50.908	52.528	0.012436					66	40	2	0	0	0	0.7932	1	4501	4501		23.042	4.7181	1	103130			37226	5700	24762	24774	42370	42370					0.08458983704770162
MVKIIGSKH	9	Unmodified	_MVKIIGSKH_					0	0	0		ENSG00000162598|ENST00000371201|C1orf87	ENSG00000162598|ENST00000371201|C1orf87	ENSG00000162598|ENST00000371201|C1orf87	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8008728027344	2	506.802237	1011.58992	-0.82989	-0.00042059	-1.3265	-0.00067229	-2.1564	-0.0010929	506.80152875358044	53.728	1.1104	53.75	53.327	54.438	0.022541					49	31	2	0	0	0	0.76764	1	4737	4737		34.173	0.65696	1	190510			37227	5700	24762	24774	42371	42371					0.08458983704770162
MVKIIGSKH	9	Unmodified	_MVKIIGSKH_					0	0	0		ENSG00000162598|ENST00000371201|C1orf87	ENSG00000162598|ENST00000371201|C1orf87	ENSG00000162598|ENST00000371201|C1orf87	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.79937744140625	2	506.802237	1011.58992	-0.048814	-2.4739E-05	-2.3669	-0.0011995	-2.4157	-0.0012243	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.76764	1	3209	3209		34.173	0.65696	1	475290			37228	5700	24762	24774	42372	42372					0.08458983704770162
MVKTGSLA	8	Unmodified	_MVKTGSLA_					0	0	0			REV__nc|ENSG00000172824|Q5XG92-8|CES4A	REV__nc|ENSG00000172824|Q5XG92-8|CES4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.7244567871094	2	403.725664	805.436775	0.40958	0.00016536	-4.2515	-0.0017164	-3.8419	-0.0015511	403.72380872064997	64.881	1.7093	65.005	63.854	65.563	0.12396					144	69	3	0	0	0	0.89962	1	5693	5693		38.806	1.647	1	1091100	+		37229	30032	24763	24775	42373	42373					0.026273685882983955
MVKTVTLRFV	10	Unmodified	_MVKTVTLRFV_					0	0	0		ENST00000282570.3_1_2:70064728-70064764:+|nuORF	ENST00000282570.3_1_2:70064728-70064764:+|nuORF	ENST00000282570.3_1_2:70064728-70064764:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.3580932617188	2	597.357376	1192.7002	0.89294	0.00053341	0.40003	0.00023896	1.293	0.00077237	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.86272	1	10496	10496		24.519	1.4767	1	2674200			37230	9638	24764	24776	42374	42374					0.11155783973163125
MVLAGLIR	8	Unmodified	_MVLAGLIR_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;nc|ENSG00000176225|Q86VV8-4|RTTN;nc|ENSG00000176225|Q86VV8-2|RTTN;ENST00000581583.1_1_18:67834153-67872894:-|nuORF	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2760925292969	2	436.772948	871.531344	0.36031	0.00015737	1.5614	0.00068196	1.9217	0.00083933	436.77349327524536	26.738	0.89724	26.766	26.451	27.349	0.028172					66	41	2	0	0	0	0.79929	1	1016	1016		18.324	0.95945	1	200440			37231	7065	24765	24777	42375	42375					0.09043927130278462
MVLFRPSPP	9	Unmodified	_MVLFRPSPP_					0	0	0			REV__ENSG00000146411|ENST00000275230|SLC2A12	REV__ENSG00000146411|ENST00000275230|SLC2A12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	522.2894897460938	2	522.288963	1042.56337	-0.46339	-0.00024202	2.8702	0.0014991	2.4068	0.0012571	522.2903084757713	36.77	0.62352	36.716	36.426	37.049	-0.053558					33	13	3	0	0	0	0.44421	1	2461	2461		54.776	5.3348	1	285150	+		37232	20014	24766	24778	42376	42376					0.04379294813429624
MVLIAPEIN	9	Oxidation (M)	_M(Oxidation (M))VLIAPEIN_		M(1)VLIAPEIN		M(51)VLIAPEIN	0	0	1			REV__ENSG00000143624|ENST00000318967|INTS3	REV__ENSG00000143624|ENST00000318967|INTS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2799377441406	2	508.27826	1014.54197	0.70176	0.00035669	3.182	0.0016173	3.8837	0.001974	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.51307	1	8829	8829		51.335	6.9583	1	1954800	+		37233	19828	24767	24779	42377	42377		293			0.03527864994077845
MVLKVKAN	8	Unmodified	_MVLKVKAN_					0	0	0			REV__ENSG00000206052|ENST00000382713|DOK6	REV__ENSG00000206052|ENST00000382713|DOK6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.779541015625	2	451.778231	901.541908	-0.13936	-6.2962E-05	3.9691	0.0017932	3.8297	0.0017302	451.78016542853146	86.777	1.2456	86.844	86.37	87.616	0.067444					84	28	4	0	0	0	0.85277	1	8791	8791		25.45	0	1	241100	+		37234	23584	24768	24780	42378	42378					0.08719909784724678
MVLLPASLAS	10	Unmodified	_MVLLPASLAS_					0	0	0		nc|ENSG00000293392|Q8IVK1-2|GLYCAM1;nc|ENSG00000293392|Q8IVK1|GLYCAM1	nc|ENSG00000293392|Q8IVK1-2|GLYCAM1	nc|ENSG00000293392|Q8IVK1-2|GLYCAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.290283203125	2	501.288628	1000.5627	0.83893	0.00042055	2.6202	0.0013135	3.4591	0.001734	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.85934	1	8730	8730		35.618	1.6967	1	2850500			37235	15352	24769	24781	42379	42379					0.062444553737236674
MVLLPASLAS	10	Unmodified	_MVLLPASLAS_					0	0	0		nc|ENSG00000293392|Q8IVK1-2|GLYCAM1;nc|ENSG00000293392|Q8IVK1|GLYCAM1	nc|ENSG00000293392|Q8IVK1-2|GLYCAM1	nc|ENSG00000293392|Q8IVK1-2|GLYCAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2905578613281	2	501.288628	1000.5627	1.1291	0.00056599	2.4986	0.0012525	3.6277	0.0018185	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.71042	1	8944	8944		44.117	7.67	1	9883700			37236	15352	24769	24781	42380	42380					0.062444553737236674
MVLLPASLAS	10	Unmodified	_MVLLPASLAS_					0	0	0		nc|ENSG00000293392|Q8IVK1-2|GLYCAM1;nc|ENSG00000293392|Q8IVK1|GLYCAM1	nc|ENSG00000293392|Q8IVK1-2|GLYCAM1	nc|ENSG00000293392|Q8IVK1-2|GLYCAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.29010009765625	2	501.288628	1000.5627	-0.50775	-0.00025453	3.985	0.0019976	3.4772	0.0017431	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.85934	1	8200	8200		35.618	2.8059	1	3014100			37237	15352	24769	24781	42381	42381					0.062444553737236674
MVLLPASLAS	10	Unmodified	_MVLLPASLAS_					0	0	0		nc|ENSG00000293392|Q8IVK1-2|GLYCAM1;nc|ENSG00000293392|Q8IVK1|GLYCAM1	nc|ENSG00000293392|Q8IVK1-2|GLYCAM1	nc|ENSG00000293392|Q8IVK1-2|GLYCAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2903137207031	2	501.288628	1000.5627	0.65623	0.00032896	2.7707	0.0013889	3.4269	0.0017179	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.86589	1	8211	8211		29.15	2.4566	1	2931000			37238	15352	24769	24781	42382	42382					0.062444553737236674
MVLLPASLAS	10	Unmodified	_MVLLPASLAS_					0	0	0		nc|ENSG00000293392|Q8IVK1-2|GLYCAM1;nc|ENSG00000293392|Q8IVK1|GLYCAM1	nc|ENSG00000293392|Q8IVK1-2|GLYCAM1	nc|ENSG00000293392|Q8IVK1-2|GLYCAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29052734375	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.85934	1	8581	8581		35.618	5.1146	1	9566900			37239	15352	24769	24781	42383	42383					0.062444553737236674
MVLNLQKYY	9	Unmodified	_MVLNLQKYY_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.3145141601562	2	586.312635	1170.61072	-0.85676	-0.00050233	2.5934	0.0015206	1.7367	0.0010182	586.3144173087796	85.346	0.89909	85.785	85.464	86.363	0.43967					39	21	2	0	0	0	0.18566	2	9952	9952;9962		76.847	3.9674	1	1035900	+		37240	15493	24770	24782	42384;42385	42384					0.03223529293768479
MVLNLQKYY	9	Unmodified	_MVLNLQKYY_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.3138427734375	2	586.312635	1170.61072	-0.48604	-0.00028497	3.2886	0.0019282	2.8026	0.0016432	586.314229078803	85.369	0.81366	85.816	85.547	86.361	0.44736					46	19	4	0	0	0	0.47272	1	10028	10028		53.351	3.9099	1	1112200	+		37241	15493	24770	24782	42386	42386					0.03223529293768479
MVLNLQKYY	9	Unmodified	_MVLNLQKYY_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	586.312635	1170.61072	-0.85676	-0.00050233	2.5934	0.0015206	1.7367	0.0010182	586.3144173087796	85.346	0.89909	85.785	85.464	86.363	0.43967	-0.015426	-0.00051247	NaN	76.847	39	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1035900	+		37242	15493	24770	24782							0.03223529293768479
MVLPEIPV	8	Unmodified	_MVLPEIPV_					0	0	0		ENST00000491791.1_1_3:49377935-49378118:-|nuORF	ENST00000491791.1_1_3:49377935-49378118:-|nuORF	ENST00000491791.1_1_3:49377935-49378118:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.25994873046875	2	449.259339	896.504126	0.32639	0.00014663	1.7929	0.00080549	2.1193	0.00095212	449.259982210285	72.745	0.71985	72.787	72.415	73.135	0.042114					49	31	2	0	0	0	0.86791	1	7025	7025		28.254	1.4582	1	206780			37243	12691	24771	24783	42387	42387					0.05173398799240658
MVLRKAALKQ	10	Unmodified	_MVLRKAALKQ_					0	0	0		ENSG00000125319|ENST00000585683|HROB	ENSG00000125319|ENST00000585683|HROB	ENSG00000125319|ENST00000585683|HROB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.3225708007812	2	579.362993	1156.71143	-0.49897	-0.00028909	3.0404	0.0017615	2.5414	0.0014724	579.3648892801369	16.377	0.27293	15.89	15.779	16.052	-0.48718					7	5	2	0	0	0	0.37624	1	133	133		37.159	26.894	1	95434			37244	3381	24772	24784	42388	42388					0.13934606067277855
MVLRKRRHN	9	Unmodified	_MVLRKRRHN_					0	0	0			REV__ENST00000556034.1_1_15:22567057-22567180:+|nuORF	REV__ENST00000556034.1_1_15:22567057-22567180:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.2433776855469	3	403.908497	1208.70366	1.4026	0.00056654	3.0368	0.0012266	4.4394	0.0017931	403.9097044639606	65.998	1.3411	66.384	65.959	67.3	0.38582					64	35	2	0	0	0	0.7932	1	7219	7219		24.519	0	1	273570	+		37245	28692	24773	24785	42389	42389					0.10765891590381216
MVLRKRRHN	9	Unmodified	_MVLRKRRHN_					0	0	0			REV__ENST00000556034.1_1_15:22567057-22567180:+|nuORF	REV__ENST00000556034.1_1_15:22567057-22567180:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9103088378906	3	403.908497	1208.70366	1.6372	0.00066129	2.507	0.0010126	4.1443	0.0016739	403.90940390905183	68.69	2.5103	69.075	67.299	69.809	0.38482					145	63	3	0	0	0	0.6204	4	7540	7540;7552;7563;7584		45.972	12.933	1	351280	+		37246	28692	24773	24785	42390;42391;42392;42393	42390					0.10765891590381216
MVMVRSLEP	9	Unmodified	_MVMVRSLEP_					0	0	0		ENSG00000196821|ENST00000374023|ILRUN	ENSG00000196821|ENST00000374023|ILRUN	ENSG00000196821|ENST00000374023|ILRUN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2723999023438	2	531.277738	1060.54092	0.7463	0.00039649	-1.6503	-0.00087677	-0.90401	-0.00048028	531.2765731147365	49.985	0.90005	50.83	50.395	51.295	0.84501					42	21	3	0	0	0	0.38563	1	4912	4912		58.782	7.4465	1	1251300			37247	8105	24774	24786	42394	42394					0.013073273534928376
MVNERQPF	8	Unmodified	_MVNERQPF_					0	0	0		ENSG00000138768|ENST00000514213|USO1;nc|ENSG00000138768|O60763-2|USO1	ENSG00000138768|ENST00000514213|USO1	ENSG00000138768|ENST00000514213|USO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.74969482421875	2	510.750201	1019.48585	0.62119	0.00031727	-2.0317	-0.0010377	-1.4105	-0.00072043	510.74902337734727	58.348	0.86596	58.902	58.555	59.421	0.55323					51	20	3	0	0	0	0.93293	1	6126	6126		51.335	1.7994	1	1125700			37248	4329	24775	24787	42395	42395					-0.02311343122744347
MVPATSGY	8	Unmodified	_MVPATSGY_					0	0	0		nc|ENSG00000101901|Q9NP73-4|ALG13;nc|ENSG00000101901|Q9NP73-3|ALG13;ENSG00000101901|ENST00000394780|ALG13;ENST00000460092.2_1_X:110970875-110979982:+|nuORF	nc|ENSG00000101901|Q9NP73-4|ALG13	nc|ENSG00000101901|Q9NP73-4|ALG13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1936950683594	2	413.194196	824.37384	-0.094873	-3.9201E-05	-1.7383	-0.00071825	-1.8331	-0.00075745	413.1937900034763	84.315	3.1314	84.763	83.717	86.848	0.44736					207	76	5	0	0	0	0.81548	1	9997	9997		20.482	1.1219	1	10183000			37249	1970	24776	24788	42396	42396					-0.0453719719973833
MVPLLYPGV	9	Unmodified	_MVPLLYPGV_					0	0	0		nc|ENSG00000156042|Q5T0N1-2|CFAP70;nc|ENSG00000156042|Q5T0N1|CFAP70;ENSG00000156042|ENST00000355577|CFAP70	nc|ENSG00000156042|Q5T0N1-2|CFAP70	nc|ENSG00000156042|Q5T0N1-2|CFAP70	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.78179931640625	2	494.780439	987.546325	-0.98597	-0.00048784	1.0575	0.00052323	0.071529	3.5391E-05	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.7932	1	8118	8118		21.702	0	1	385180			37250	5360	24777	24789	42397	42397					0.05205374207639579
MVPPKTVM	8	Unmodified	_MVPPKTVM_					0	0	0			REV__ENSG00000196350|ENST00000601693|ZNF729	REV__ENSG00000196350|ENST00000601693|ZNF729	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7454833984375	2	451.745542	901.476531	-0.34142	-0.00015424	0.93285	0.00042141	0.59143	0.00026717	451.7457899922303	34.694	1.135	34.701	34.293	35.428	0.0063934					58	27	3	0	0	0	0.87922	1	2153	2153		31.955	1.4512	1	280890	+		37251	23117	24778	24790	42398	42398					0.021851722673659424
MVQQLLIAAD	10	Unmodified	_MVQQLLIAAD_					0	0	0			REV__nc|ENSG00000014123|O94874-3|UFL1	REV__nc|ENSG00000014123|O94874-3|UFL1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.3052978515625	2	551.302267	1100.58998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.936	1	64.901	64.401	65.401	-0.034798								0	0	0	0.45132	1	6217	6217		56.721	0.28726	1		+		37252	16201	24779	24791	42399	42399					0.04370938914121325
MVQRNLIT	8	Unmodified	_MVQRNLIT_					0	0	0		ENST00000512486.5_1_5:95055354-95055441:-|nuORF	ENST00000512486.5_1_5:95055354-95055441:-|nuORF	ENST00000512486.5_1_5:95055354-95055441:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.77325439453125	2	487.776219	973.537886	-0.70204	-0.00034244	-3.9972	-0.0019498	-4.6993	-0.0022922	487.7740978049072	87.881	0.86792	88.083	87.714	88.582	0.20114					44	20	3	0	0	0	0.79403	1	8708	8708		63.306	2.3343	1	834570			37253	13038	24780	24792	42400	42400					0.05005820291012242
MVQTIFAPPN	10	Unmodified	_MVQTIFAPPN_					0	0	0		ENST00000577901.5_1_18:9914253-9936249:+|nuORF;ENSG00000101558|ENST00000400000|VAPA;nc|ENSG00000101558|Q9P0L0-2|VAPA	ENST00000577901.5_1_18:9914253-9936249:+|nuORF	ENST00000577901.5_1_18:9914253-9936249:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.2904052734375	2	559.289159	1116.56377	0.71868	0.00040195	1.6539	0.00092501	2.3726	0.001327	559.2899645855562	77.204	0.99672	77.609	77.226	78.222	0.40488					70	25	4	0	0	0	0.14207	1	8806	8806		96.034	8.3372	1	3911800			37254	1949	24781	24793	42401	42401					0.010146697426307583
MVQTIFAPPN	10	Unmodified	_MVQTIFAPPN_					0	0	0		ENST00000577901.5_1_18:9914253-9936249:+|nuORF;ENSG00000101558|ENST00000400000|VAPA;nc|ENSG00000101558|Q9P0L0-2|VAPA	ENST00000577901.5_1_18:9914253-9936249:+|nuORF	ENST00000577901.5_1_18:9914253-9936249:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2903442382812	2	559.289159	1116.56377	-0.060928	-3.4076E-05	2.1898	0.0012247	2.1289	0.0011907	559.2902950832719	77.079	1.0886	77.647	77.332	78.421	0.56836					71	26	4	0	0	0	0.14384	2	8800	8788;8800		95.815	5.2143	1	4085400			37255	1949	24781	24793	42402;42403	42403					0.010146697426307583
MVRPVDVVLAN	11	Unmodified	_MVRPVDVVLAN_					0	0	0			REV__ENST00000599961.1_1_19:58234694-58238980:-|nuORF	REV__ENST00000599961.1_1_19:58234694-58238980:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.92950439453125	3	404.897152	1211.66963	2.2032	0.00089209	-1.4308	-0.00057932	0.77247	0.00031277	404.8962293685942	46.468	0.35265	46.464	46.241	46.593	-0.0041618					11	8	2	0	0	0	0.17382	1	3748	3748		10.562	4.5608	1	45560	+		37256	29306	24782	24794	42404	42404					0.07226005588131557
MVRSRGRASGT	11	Unmodified	_MVRSRGRASGT_					0	0	0			REV__ENSG00000135097|ENST00000257552|MSI1	REV__ENSG00000135097|ENST00000257552|MSI1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3425903320312	2	589.314563	1176.61457	-0.67844	-0.00039982	2.6051	0.0015352	1.9267	0.0011354	589.3153297515435	93.746	0.21294	93.815	93.624	93.837	0.069595					6	4	2	0	0	0	0.17415	1	9725	9725		20.837	3.3691	1	35088	+		37257	19193	24783	24795	42405	42405					0.0333301184020911
MVRVLSRPLP	10	Unmodified	_MVRVLSRPLP_					0	0	0			REV__nc|ENSG00000155229|Q96T76-8|MMS19	REV__nc|ENSG00000155229|Q96T76-8|MMS19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	584.3563232421875	2	584.355168	1166.69578	0.8115	0.00047421	0.56134	0.00032802	1.3728	0.00080223	584.3555753434755	92.506	2.8121	92.665	91.311	94.123	0.15874					185	66	3	0	0	0	0.8545	1	9364	9364		36.447	10.997	1	722410	+		37258	29945	24784	24796	42406	42406					0.1191031955024755
MVSFCILKP	9	Carbamidomethyl (C)	_MVSFC(Carbamidomethyl (C))ILKP_	MVSFC(1)ILKP		MVSFC(61)ILKP		0	1	0			REV__ENST00000560489.2_1_15:49657539-49658184:-|nuORF	REV__ENST00000560489.2_1_15:49657539-49658184:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.7954711914062	2	547.790481	1093.56641	-0.32571	-0.00017842	0.20181	0.00011055	-0.1239	-6.7871E-05	547.7909213570138	58.838	0.4333	59.391	59.3	59.733	0.55323					19	10	2	0	0	0	0.35373	1	6188	6188		60.972	8.0352	1	594100	+		37259	28763	24785	24797	42407	42407	350				0.023368018759356346
MVSIHNRE	8	Unmodified	_MVSIHNRE_					0	0	0			REV__ENST00000474037.5_1_19:53884796-53884955:+|nuORF	REV__ENST00000474037.5_1_19:53884796-53884955:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.2450256347656	2	493.247826	984.481099	0.44489	0.00021944	-3.8166	-0.0018825	-3.3717	-0.0016631	493.24582366684365	27.777	1.5267	27.813	27.395	28.922	0.03607					129	51	4	0	0	0	0.9295	1	1337	1337		55.504	10.973	1	868330	+		37260	27291	24786	24798	42408	42408					-0.011762272655118977
MVVHRDLKPE	10	Unmodified	_MVVHRDLKPE_					0	0	0		ENSG00000132356|ENST00000397128|PRKAA1;nc|ENSG00000132356|Q13131-2|PRKAA1;ENSG00000162409|ENST00000371244|PRKAA2	ENSG00000132356|ENST00000397128|PRKAA1	ENSG00000132356|ENST00000397128|PRKAA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.7398681640625	3	408.557019	1222.64923	1.3102	0.00053531	-3.2775	-0.001339	-1.9672	-0.00080373	408.555663080234	35.519	0.26662	35.9	35.749	36.015	0.3812					10	6	2	0	0	0	0.37624	1	2720	2720		42.864	15.817	1	70352			37261	3785	24787	24799	42409	42409					0.04680834928308286
MVVLVLSYKS	10	Unmodified	_MVVLVLSYKS_					0	0	0		ENSG00000214042|ENST00000239347|IFNA7	ENSG00000214042|ENST00000239347|IFNA7	ENSG00000214042|ENST00000239347|IFNA7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8251953125	2	569.83066	1137.64677	-0.92432	-0.00052671	-3.2662	-0.0018612	-4.1905	-0.0023879	569.8284712646778	59.116	0.49432	59.508	59.234	59.728	0.39209					19	11	2	0	0	0	0.37624	1	6196	6196		35.618	14.671	1	269300			37262	8613	24788	24800	42410	42410					0.08344986470638105
MVVPAAAR	8	Unmodified	_MVVPAAAR_					0	0	0			REV__ENSG00000118412|ENST00000551025|CASP8AP2	REV__ENSG00000118412|ENST00000551025|CASP8AP2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.7845153808594	2	407.733823	813.453093	-1.9384	-0.00079034	2.568	0.0010471	0.62966	0.00025673	407.73266940735925	36.154	0.25132	36.154	36.008	36.259	0					7	5	2	0	0	0	0.4196	1	2064	2064		7.6903	0	1	12112	+		37263	18308	24789	24801	42411	42411					0.038904945450553896
MWKLEDKVKG	10	Unmodified	_MWKLEDKVKG_					0	0	0		ENST00000557401.5_1_14:75158793-75158889:-|nuORF	ENST00000557401.5_1_14:75158793-75158889:-|nuORF	ENST00000557401.5_1_14:75158793-75158889:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	617.3346557617188	2	617.336641	1232.65873	0.46482	0.00028695	-2.5386	-0.0015672	-2.0738	-0.0012802	617.335092488195	79.707	0.88818	80.257	79.956	80.845	0.54945					42	20	3	0	0	0	0.2575	1	9167	9167		77.318	3.1526	1	1749800			37264	13772	24790	24802	42412	42412					0.05170603213787217
MWPKSELKLQW	11	Unmodified	_MWPKSELKLQW_					0	0	0		nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	482.9263000488281	3	482.59184	1444.75369	0.2673	0.00012899	-0.86118	-0.0004156	-0.59389	-0.00028661	482.92578293687285	43.737	0.53176	43.71	43.403	43.934	-0.026764					19	12	2	0	0	0	0.75121	1	3360	3360		21.78	3.2494	1	97903			37265	8045	24791	24803	42413	42413					0.04910536685019906
MWPKSELKLQW	11	Unmodified	_MWPKSELKLQW_					0	0	0		nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	482.59184	1444.75369	-1.0009	-0.00048301	1.0494	0.00050643	0.048523	2.3417E-05	482.59186870972286	43.733	0.46529	43.697	43.449	43.914	-0.035164	-0.0061717	0.0017842	NaN	21.78	19	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81829			37266	8045	24791	24803							0.04910536685019906
MWQLYLIAEL	10	Unmodified	_MWQLYLIAEL_					0	0	0			REV__ENST00000373670.5_1_9:125621066-125621105:-|nuORF	REV__ENST00000373670.5_1_9:125621066-125621105:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.347412109375	2	640.341392	1278.66823	4.3956	0.0028147	3.9065	0.0025015	8.3021	0.0053162	640.343646089099	102.73	0.67924	103.03	102.81	103.49	0.29865					86	22	4	0	0	0	0.67571	1	12516	12516		45.972	4.5456	1	12674000	+		37267	25768	24792	24804	42414	42414					0.0400437149935442
MWRRSAQSFGM	11	Unmodified	_MWRRSAQSFGM_					0	0	0			REV__nc|ENSG00000173124|Q6P461-2|ACSM6	REV__nc|ENSG00000173124|Q6P461-2|ACSM6	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.8821716308594	3	452.881508	1355.62269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.375	1	18.298	17.798	18.798	-0.07671								0	0	0	0.56276	1	297	297		27.644	4.266	1		+		37268	21891	24793	24805	42415	42415					-0.04089177234686758
MWVHTPLV	8	Unmodified	_MWVHTPLV_					0	0	0			REV__chr10:101782346-101782478|16|16.25|0.38|5.42|-|2|None,NPM3|1	REV__chr10:101782346-101782478|16|16.25|0.38|5.42|-|2|None,NPM3|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.763916015625	2	491.762581	981.510608	-0.79496	-0.00039093	2.7534	0.001354	1.9585	0.00096311	491.7638392443188	49.097	1.1695	49.557	48.985	50.155	0.45983					77	28	5	0	0	0	0.65768	2	4775	4775;4788		69.093	15.742	1	5885400	+		37269	15462	24794	24806	42416;42417	42416					0.019113367506406576
MWVHTPLV	8	Unmodified	_MWVHTPLV_					0	0	0			REV__chr10:101782346-101782478|16|16.25|0.38|5.42|-|2|None,NPM3|1	REV__chr10:101782346-101782478|16|16.25|0.38|5.42|-|2|None,NPM3|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.76336669921875	2	491.762581	981.510608	0.17598	8.6541E-05	1.7652	0.00086806	1.9412	0.00095461	491.7633396187307	48.936	1.0063	49.84	49.489	50.496	0.90424					64	24	4	0	0	0	0.92176	1	4732	4732		46.766	0.81448	1	5497800	+		37270	15462	24794	24806	42418	42418					0.019113367506406576
MWWERWMKHWS	11	Unmodified	_MWWERWMKHWS_					0	0	0		ENST00000301180.9_1_12:51133363-51135252:+|nuORF	ENST00000301180.9_1_12:51133363-51135252:+|nuORF	ENST00000301180.9_1_12:51133363-51135252:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	554.9917602539062	3	554.920074	1661.73839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.749	1	24.849	24.349	25.349	0.10045								0	0	0	0.56276	1	868	868		2.534	2.534	1				37271	9803	24795	24807	42419	42419					-0.06600653383861754
MWWHSYWRVWI	11	Unmodified	_MWWHSYWRVWI_					0	0	0		ENST00000295992.7_1_3:142606565-142606607:-|nuORF	ENST00000295992.7_1_3:142606565-142606607:-|nuORF	ENST00000295992.7_1_3:142606565-142606607:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.6000366210938	3	550.599329	1648.77616	0.48693	0.0002681	2.7998	0.0015416	3.2867	0.0018097	550.6008568284933	18.08	0.56966	18.156	17.968	18.538	0.075441					48	16	5	0	0	0	0.84494	1	274	274		6.3209	0	1	241290			37272	9726	24796	24808	42420	42420					-0.02227819126733266
MWWHSYWRVWI	11	Unmodified	_MWWHSYWRVWI_					0	0	0		ENST00000295992.7_1_3:142606565-142606607:-|nuORF	ENST00000295992.7_1_3:142606565-142606607:-|nuORF	ENST00000295992.7_1_3:142606565-142606607:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.6007690429688	3	550.599329	1648.77616	0.29436	0.00016207	3.0304	0.0016686	3.3248	0.0018306	550.6010461865411	18.389	0.63671	18.312	18.121	18.758	-0.07671					40	17	4	0	0	0	0.88596	1	304	304		3.6191	0.21035	1	246790			37273	9726	24796	24808	42421	42421					-0.02227819126733266
MYATLVRKLI	10	Unmodified	_MYATLVRKLI_					0	0	0			REV__ENST00000514109.1_1_4:68567136-68586253:+|nuORF	REV__ENST00000514109.1_1_4:68567136-68586253:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3668212890625	2	604.365201	1206.71585	-0.12334	-7.4541E-05	2.4192	0.0014621	2.2959	0.0013875	604.3664641900143	107.88	0.45378	107.91	107.52	107.97	0.035622					25	10	3	0	0	0	0.85939	1	11804	11804		23.042	0	1	10672000	+		37274	28005	24797	24809	42422	42422					0.12076070490184065
MYEWGTAP	8	Unmodified	_MYEWGTAP_					0	0	0			REV__nc|ENSG00000139144|O75747-2|PIK3C2G	REV__nc|ENSG00000139144|O75747-2|PIK3C2G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.705078125	2	477.704928	953.395304	0.25943	0.00012393	-1.7068	-0.00081534	-1.4474	-0.00069141	477.7038880013328	56.386	0.42918	56.783	56.556	56.985	0.39672					20	9	3	0	0	0	0.89457	1	5804	5804		37.028	3.5129	1	1923800	+		37275	15527	24798	24810	42423	42423					-0.08325812171017333
MYFELQQTWFT	11	Unmodified	_MYFELQQTWFT_					0	0	0		nc|ENSG00000137968|Q8NCS7|SLC44A5;nc|ENSG00000137968|Q8NCS7-5|SLC44A5;ENSG00000137968|ENST00000370859|SLC44A5	nc|ENSG00000137968|Q8NCS7|SLC44A5	nc|ENSG00000137968|Q8NCS7|SLC44A5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.7709045410156	3	498.563839	1492.66969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.303	1	68.432	67.932	68.932	0.12838								0	0	0	0.56276	1	6142	6142		17.833	1.3033	1				37276	14949	24799	24811	42424	42424					-0.05694039202580825
MYFLPIGG	8	Unmodified	_MYFLPIGG_					0	0	0			REV__ENSG00000108576|ENST00000650711|SLC6A4	REV__ENSG00000108576|ENST00000650711|SLC6A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	449.2330017089844	2	449.230582	896.446611	-1.2481	-0.0005607	1.3049	0.00058621	0.056789	2.5511E-05	449.23112787491493	83.63	3.2349	83.63	82.037	85.271	0					120	78	2	0	0	0	0.84567	1	7730	7730		24.504	0	1	126580	+		37277	17720	24800	24812	42425	42425					-0.0057544340629647195
MYFVLLIPKK	10	Unmodified	_MYFVLLIPKK_					0	0	0			REV__ENST00000370487.4_1_20:61431489-61431786:+|nuORF	REV__ENST00000370487.4_1_20:61431489-61431786:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3825073242188	2	626.38032	1250.74609	2.9114	0.0018237	-2.3158	-0.0014506	0.59561	0.00037308	626.3789104514062	116.12	0.91767	116.1	115.83	116.75	-0.02433					47	26	2	0	0	0	0.84874	1	12926	12926		18.324	3.4595	1	135240	+		37278	25655	24801	24813	42426	42426					0.1307442915538104
MYFVLLIPKK	10	Unmodified	_MYFVLLIPKK_					0	0	0			REV__ENST00000370487.4_1_20:61431489-61431786:+|nuORF	REV__ENST00000370487.4_1_20:61431489-61431786:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.381103515625	2	626.38032	1250.74609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.11	1	116.04	115.54	116.54	-0.069672								0	0	0	0.45132	1	12464	12464		29.15	1.0681	1		+		37279	25655	24801	24813	42427	42427					0.1307442915538104
MYGGRTPLG	9	Oxidation (M)	_M(Oxidation (M))YGGRTPLG_		M(1)YGGRTPLG		M(55)YGGRTPLG	0	0	1		ENST00000509705.3_1_19:39390655-39398344:+|nuORF;nc|ENSG00000104825|Q15653-2|NFKBIB;ENSG00000104825|ENST00000313582|NFKBIB	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.2361755371094	2	484.236927	966.459301	-0.09072	-4.393E-05	-1.405	-0.00068037	-1.4958	-0.0007243	484.23621822802284	87.004	0.94917	87.072	86.495	87.444	0.067444					68	21	4	0	0	0	0.44421	1	8813	8813		54.776	10.66	1	2724000			37280	2152	24802	24814	42428	42428		43			-0.025270320140634794
MYGGRTPLG	9	Oxidation (M)	_M(Oxidation (M))YGGRTPLG_		M(1)YGGRTPLG		M(49)YGGRTPLG	0	0	1		ENST00000509705.3_1_19:39390655-39398344:+|nuORF;nc|ENSG00000104825|Q15653-2|NFKBIB;ENSG00000104825|ENST00000313582|NFKBIB	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.2361755371094	2	484.236927	966.459301	-1.0152	-0.00049159	-0.49784	-0.00024107	-1.513	-0.00073266	484.23671565804926	85.683	1.1123	85.741	85.414	86.526	0.057899					84	25	5	0	0	0	0.55097	1	8705	8705		49.442	6.9671	1	4182500			37281	2152	24802	24814	42429	42429		43			-0.025270320140634794
MYGGRTPLG	9	Oxidation (M)	_M(Oxidation (M))YGGRTPLG_		M(1)YGGRTPLG		M(64)YGGRTPLG	0	0	1		ENST00000509705.3_1_19:39390655-39398344:+|nuORF;nc|ENSG00000104825|Q15653-2|NFKBIB;ENSG00000104825|ENST00000313582|NFKBIB	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.23614501953125	2	484.236927	966.459301	-1.6244	-0.00078657	-0.7543	-0.00036526	-2.3787	-0.0011518	484.2368830443012	86.725	1.2091	86.89	86.438	87.647	0.16473					75	27	5	0	0	0	0.30689	1	8477	8477		64.207	16.292	1	4385600			37282	2152	24802	24814	42430	42430		43			-0.025270320140634794
MYGGRTPLG	9	Oxidation (M)	_M(Oxidation (M))YGGRTPLG_		M(1)YGGRTPLG		M(66)YGGRTPLG	0	0	1		ENST00000509705.3_1_19:39390655-39398344:+|nuORF;nc|ENSG00000104825|Q15653-2|NFKBIB;ENSG00000104825|ENST00000313582|NFKBIB	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.23602294921875	2	484.236927	966.459301	0.22337	0.00010816	-2.9462	-0.0014267	-2.7229	-0.0013185	484.2359214945001	86.186	1.2292	86.629	86.074	87.303	0.44331					103	29	6	0	0	0	0.28163	1	10105	10105		66.429	6.1353	1	37343000			37283	2152	24802	24814	42431	42431		43			-0.025270320140634794
MYGGRTPLG	9	Oxidation (M)	_M(Oxidation (M))YGGRTPLG_		M(1)YGGRTPLG		M(64)YGGRTPLG	0	0	1		ENST00000509705.3_1_19:39390655-39398344:+|nuORF;nc|ENSG00000104825|Q15653-2|NFKBIB;ENSG00000104825|ENST00000313582|NFKBIB	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23614501953125	2	484.236927	966.459301	-0.88512	-0.00042861	-1.8146	-0.00087868	-2.6997	-0.0013073	484.23648902418813	86.261	1.1049	86.715	86.159	87.264	0.45429					90	26	5	0	0	0	0.30689	2	10114	10102;10114		64.207	14.183	1	35198000			37284	2152	24802	24814	42432;42433	42433		43			-0.025270320140634794
MYGGRTPLG	9	Oxidation (M)	_M(Oxidation (M))YGGRTPLG_					0	0	1		ENST00000509705.3_1_19:39390655-39398344:+|nuORF;nc|ENSG00000104825|Q15653-2|NFKBIB;ENSG00000104825|ENST00000313582|NFKBIB	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	484.236927	966.459301	-1.0329	-0.00050015	-0.15454	-7.4833E-05	-1.1874	-0.00057499	484.2366918205203	87.198	0.86508	87.198	86.69	87.555	0	0.2757	0.0013762	NaN	64.207	44	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	534500			37285	2152	24802	24814				43			-0.025270320140634794
MYGGRTPLG	9	Oxidation (M)	_M(Oxidation (M))YGGRTPLG_					0	0	1		ENST00000509705.3_1_19:39390655-39398344:+|nuORF;nc|ENSG00000104825|Q15653-2|NFKBIB;ENSG00000104825|ENST00000313582|NFKBIB	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	484.236927	966.459301	1.1008	0.00053307	-2.7789	-0.0013456	-1.678	-0.00081256	484.2355889219141	87.173	0.81998	87.099	86.646	87.466	-0.073997	0.17699	-0.0011654	NaN	64.207	58	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2636900			37286	2152	24802	24814				43			-0.025270320140634794
MYGGRTPLG	9	Oxidation (M)	_M(Oxidation (M))YGGRTPLG_					0	0	1		ENST00000509705.3_1_19:39390655-39398344:+|nuORF;nc|ENSG00000104825|Q15653-2|NFKBIB;ENSG00000104825|ENST00000313582|NFKBIB	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	ENST00000509705.3_1_19:39390655-39398344:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	484.236927	966.459301	-0.94068	-0.00045551	-0.68139	-0.00032995	-1.6221	-0.00078547	484.236594071932	86.919	0.82059	86.975	86.524	87.344	0.055649	0.052965	0.00086597	NaN	64.207	60	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2745600			37287	2152	24802	24814				43			-0.025270320140634794
MYKVPLIRK	9	Oxidation (M)	_M(Oxidation (M))YKVPLIRK_		M(1)YKVPLIRK		M(46)YKVPLIRK	0	0	1		ENSG00000229859|ENST00000325558|PGA3;ENSG00000229183|ENST00000378149|PGA4;ENSG00000256713|ENST00000312403|PGA5;ENST00000539649.1_1_11:60971000-60974275:+|nuORF	ENSG00000229859|ENST00000325558|PGA3	ENSG00000229859|ENST00000325558|PGA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3531494140625	2	582.352094	1162.68964	-0.84093	-0.00048972	3.1729	0.0018477	2.3319	0.001358	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.62081	1	11375	11375		45.952	7.1458	1	77752000			37288	8725	24803	24815	42434	42434		154			0.11479801318728278
MYLKITQIIH	10	Unmodified	_MYLKITQIIH_					0	0	0		ENST00000503561.7_1_5:49963943-50055521:+|nuORF	ENST00000503561.7_1_5:49963943-50055521:+|nuORF	ENST00000503561.7_1_5:49963943-50055521:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.90924072265625	3	420.577531	1258.71076	-1.7821	-0.00074949	-3.4397	-0.0014467	-5.2218	-0.0021962	420.5759554237421	46.857	0.86356	46.857	46.491	47.355	0					56	24	4	0	0	0	0.86047	1	3587	3587		23.523	5.2606	1	693050			37289	12885	24804	24816	42435	42435					0.09175766627572557
MYLSEANGD	9	Unmodified	_MYLSEANGD_					0	0	0			REV__ENSG00000148343|ENST00000684074|MIGA2	REV__ENSG00000148343|ENST00000684074|MIGA2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	499.7718811035156	2	500.208032	998.401511	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.991	1	68.991	68.491	69.491	0								0	0	0	0.29475	1	6140	6140		32.812	0	1		+		37290	20109	24805	24817	42436	42436					-0.09775338730173644
MYLTGALKY	9	Unmodified	_MYLTGALKY_					0	0	0			REV__ENST00000336097.7_1_17:49238605-49239168:+|nuORF	REV__ENST00000336097.7_1_17:49238605-49239168:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2782592773438	2	530.280803	1058.54705	0.60487	0.00032075	-3.4869	-0.001849	-2.882	-0.0015283	530.2794405918029	59.156	1.3576	59.126	58.133	59.49	-0.030888					75	39	3	0	0	0	0.28163	1	5547	5547		66.429	5.4573	1	335700	+		37291	25177	24806	24818	42437	42437					0.020121688566632656
MYLTLSQALH	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))MYLTLSQALH_					1	0	0		ENST00000427063.6_1_10:29709922-29709964:+|nuORF	ENST00000427063.6_1_10:29709922-29709964:+|nuORF	ENST00000427063.6_1_10:29709922-29709964:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.879150390625	3	406.877758	1217.61144	2.9206	0.0011883	0.65118	0.00026495	3.5718	0.0014533	406.8779749942913	18.544	0.89413	18.465	18.249	19.143	-0.078943					73	35	5	0	0	0	0.63899	1	331	331		47.96	12.464	1	399050			37292	11565	24807	24819	42438	42438					0.011343239428242669
MYNGQPIT	8	Unmodified	_MYNGQPIT_					0	0	0		ENST00000405832.2_1_6:56297478-56297616:-|nuORF;ENSG00000179051|ENST00000375436|RCC2	ENST00000405832.2_1_6:56297478-56297616:-|nuORF	ENST00000405832.2_1_6:56297478-56297616:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.2164611816406	2	462.218203	922.421853	0.48765	0.0002254	-3.7131	-0.0017163	-3.2255	-0.0014909	462.2162601288946	49.699	0.78276	50.544	50.272	51.055	0.84501					34	18	3	0	0	0	0.41376	1	4869	4869		79.939	8.5613	1	1045100			37293	7240	24808	24820	42439	42439					-0.04246123279699532
MYNNCSTNQN	10	Unmodified	_MYNNCSTNQN_					0	0	0			REV__nc|ENSG00000104133|Q96JI7-2|SPG11	REV__nc|ENSG00000104133|Q96JI7-2|SPG11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.7222900390625	2	594.724055	1187.43356	-0.14074	-8.3702E-05	-2.8737	-0.0017091	-3.0144	-0.0017928	594.7222857294024	79.63	2.5375	80.046	79.572	82.109	0.41621					126	60	3	0	0	0	0.80179	2	9164	9116;9164		39.253	7.298	1	4289000	+		37294	17438	24809	24821	42440;42441	42441					-0.15266294318689688
MYRLRKTL	8	Unmodified	_MYRLRKTL_					0	0	0			REV__nc|ENSG00000085563|P08183-2|ABCB1	REV__nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8186645507812	2	540.820961	1079.62737	0.098678	5.3367E-05	-4.3964	-0.0023777	-4.2977	-0.0023243	540.8184275670533	56.473	0.6984	57.033	56.703	57.401	0.55954					42	15	3	0	0	0	0.89679	1	5877	5877		37.812	2.6595	1	1990900	+		37295	16894	24810	24822	42442	42442					0.09074074970385482
MYTDPIPWC	9	Unmodified	_MYTDPIPWC_					0	0	0			REV__ENST00000548511.5_1_12:88439351-88442196:+|nuORF	REV__ENST00000548511.5_1_12:88439351-88442196:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.0628662109375	2	563.240821	1124.46709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.392	1	68.52	68.02	69.02	0.12838								0	0	0	0.2969	1	6153	6153		31.955	1.6371	1		+		37296	19088	24811	24823	42443	42443					-0.09016640808795273
MYVFNIEVD	9	Unmodified	_MYVFNIEVD_					0	0	0		ENST00000261401.7_1_12:109039328-109039364:-|nuORF	ENST00000261401.7_1_12:109039328-109039364:-|nuORF	ENST00000261401.7_1_12:109039328-109039364:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	565.26318359375	2	565.26535	1128.51615	-0.8423	-0.00047612	-3.4052	-0.0019249	-4.2475	-0.002401	565.2632207445736	42.281	0.76114	42.252	41.952	42.713	-0.029461					34	18	3	0	0	0	0.14386	1	3141	3141		84.916	13.62	1	457480			37297	9408	24812	24824	42444	42444					-0.04297029248209583
MYVFNIEVD	9	Unmodified	_MYVFNIEVD_					0	0	0		ENST00000261401.7_1_12:109039328-109039364:-|nuORF	ENST00000261401.7_1_12:109039328-109039364:-|nuORF	ENST00000261401.7_1_12:109039328-109039364:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	565.2630004882812	2	565.26535	1128.51615	-0.93433	-0.00052815	-3.5343	-0.0019978	-4.4687	-0.002526	565.2632126335383	42.207	0.73315	42.169	41.936	42.669	-0.038223					39	17	3	0	0	0	0.049188	2	3219	3219;3231		108.09	28.636	1	616890			37298	9408	24812	24824	42445;42446	42445					-0.04297029248209583
MYVFNIEVD	9	Unmodified	_MYVFNIEVD_					0	0	0		ENST00000261401.7_1_12:109039328-109039364:-|nuORF	ENST00000261401.7_1_12:109039328-109039364:-|nuORF	ENST00000261401.7_1_12:109039328-109039364:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	565.2632446289062	2	565.26535	1128.51615	-0.29026	-0.00016407	-3.9947	-0.0022581	-4.285	-0.0024221	565.2629052422653	42.198	0.98447	42.202	41.912	42.897	0.0034142					41	23	3	0	0	0	0.049188	2	3176	3164;3176		108.09	22.728	1	546820			37299	9408	24812	24824	42447;42448	42448					-0.04297029248209583
MYVGEIAPT	9	Oxidation (M)	_M(Oxidation (M))YVGEIAPT_		M(1)YVGEIAPT		M(41)YVGEIAPT	0	0	1		ENSG00000181856|ENST00000317370|SLC2A4;nc|ENSG00000181856|P14672-2|SLC2A4	ENSG00000181856|ENST00000317370|SLC2A4	ENSG00000181856|ENST00000317370|SLC2A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.7371826171875	2	498.738968	995.463383	-0.74165	-0.00036989	-3.3808	-0.0016861	-4.1224	-0.002056	498.7372470594688	25.462	1.6469	25.425	24.754	26.4	-0.037176					57	44	2	0	0	0	0.69914	1	1018	1018		40.573	8.6178	1	34631			37300	7410	24813	24825	42449	42449		128			-0.03452987311004563
MYVQPVVHPQL	11	Unmodified	_MYVQPVVHPQL_					0	0	0		nc|ENSG00000117419|O43414-2|ERI3;ENSG00000117419|ENST00000372257|ERI3	nc|ENSG00000117419|O43414-2|ERI3	nc|ENSG00000117419|O43414-2|ERI3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.90313720703125	3	437.569036	1309.68528	0.085374	3.7357E-05	2.1706	0.00094978	2.256	0.00098714	437.5697872232152	34.516	0.59225	34.461	34.237	34.829	-0.055149					52	24	3	0	0	0	0.70584	1	1749	1749		30.569	1.9921	1	130090			37301	2977	24814	24826	42450	42450					0.04282292105153829
NAAARPVVTFT	11	Unmodified	_NAAARPVVTFT_					0	0	0			REV__ENST00000561356.1_1_15:102191577-102192564:-|nuORF	REV__ENST00000561356.1_1_15:102191577-102192564:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.8174438476562	2	573.81693	1145.61931	0.15157	8.6975E-05	0.24039	0.00013794	0.39196	0.00022491	573.8169816791607	35.532	0.8356	35.78	35.438	36.273	0.2477					62	21	5	0	0	0	0.58425	1	2753	2753		45.972	0.95004	1	5270000	+		37302	28780	24815	24827	42451	42451					0.052322192545943835
NAAKVFNLY	9	Unmodified	_NAAKVFNLY_					0	0	0		nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2;ENSG00000092964|ENST00000521913|DPYSL2	nc|ENSG00000092964|Q16555-2|DPYSL2	nc|ENSG00000092964|Q16555-2|DPYSL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.281494140625	2	520.282192	1038.54983	0.58877	0.00030633	-0.51204	-0.00026641	0.07673	3.9922E-05	520.2817252207768	55.839	0.57825	56.24	55.949	56.527	0.40101					32	15	3	0	0	0	0.034856	2	5732	5732;5750		115.46	45.845	1	1114500			37303	1708	24816	24828	42452;42453	42452					0.032097603058673485
NAAKVFNLY	9	Unmodified	_NAAKVFNLY_					0	0	0		nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2;ENSG00000092964|ENST00000521913|DPYSL2	nc|ENSG00000092964|Q16555-2|DPYSL2	nc|ENSG00000092964|Q16555-2|DPYSL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.2816162109375	2	520.282192	1038.54983	0.40135	0.00020881	-0.38425	-0.00019992	0.017093	8.8931E-06	520.2819121694442	55.66	0.54138	56.226	55.948	56.489	0.56611					29	13	3	0	0	0	0.0018445	2	5738	5727;5738		143.11	71.811	1	1143900			37304	1708	24816	24828	42454;42455	42455					0.032097603058673485
NAALARVLRQL	11	Unmodified	_NAALARVLRQL_					0	0	0		nc|ENSG00000188158|Q6T4R5-2|NHS;ENSG00000188158|ENST00000676302|NHS	nc|ENSG00000188158|Q6T4R5-2|NHS	nc|ENSG00000188158|Q6T4R5-2|NHS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.879150390625	2	612.880396	1223.74624	3.0905	0.0018941	-4.4816	-0.0027467	-1.3912	-0.00085262	612.8774407741583	104.71	3.9916	104.67	103.85	107.84	-0.04039					302	94	6	0	0	0	0.64498	1	11516	11516		39.253	5.0803	1	48609000			37305	7910	24817	24829	42456	42456					0.1433156519960903
NAALARVLRQL	11	Unmodified	_NAALARVLRQL_					0	0	0		nc|ENSG00000188158|Q6T4R5-2|NHS;ENSG00000188158|ENST00000676302|NHS	nc|ENSG00000188158|Q6T4R5-2|NHS	nc|ENSG00000188158|Q6T4R5-2|NHS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	613.3839721679688	2	612.880396	1223.74624	0.28933	0.00017733	-1.62	-0.00099287	-1.3307	-0.00081554	612.8792234651027	104.57	3.8669	104.61	104	107.87	0.039864					305	91	6	0	0	0	0.65746	1	11339	11339		37.812	2.1932	1	50996000			37306	7910	24817	24829	42457	42457					0.1433156519960903
NAARDFVNY	9	Unmodified	_NAARDFVNY_					0	0	0		ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2556762695312	2	535.256705	1068.49886	-0.69546	-0.00037225	-0.01859	-9.9502E-06	-0.71405	-0.0003822	535.2569034715915	46.207	0.48016	46.678	46.417	46.897	0.4714					24	11	3	0	0	0	0.2083	1	4341	4341		72.879	14.097	1	1195300			37307	4055	24818	24830	42458	42458					-0.032651887390102274
NAARDFVNY	9	Unmodified	_NAARDFVNY_					0	0	0		ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.255615234375	2	535.256705	1068.49886	-1.0053	-0.00053811	0.081051	4.3383E-05	-0.92429	-0.00049473	535.2569667974683	46.004	0.51565	46.9	46.607	47.123	0.89542					26	12	3	0	0	0	0.36616	1	4331	4331		60.118	4.6141	1	1191500			37308	4055	24818	24830	42459	42459					-0.032651887390102274
NAARMPSPAP	10	Unmodified	_NAARMPSPAP_					0	0	0			REV__ENST00000488829.1_1_9:89626569-89628063:+|nuORF	REV__ENST00000488829.1_1_9:89626569-89628063:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.253173828125	2	506.255651	1010.49675	-1.6382	-0.00082933	-3.1195	-0.0015792	-4.7576	-0.0024086	506.25395587471024	37.705	1.0151	37.705	37.395	38.41	0					69	24	5	0	0	0	0.44803	1	2289	2289		60.118	6.7668	1	1276600	+		37309	27605	24819	24831	42460	42460					-0.00807940748461533
NADLILIE	8	Unmodified	_NADLILIE_					0	0	0			REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7541809082031	2	450.755475	899.496398	-1.264	-0.00056978	-1.5875	-0.00071559	-2.8516	-0.0012854	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.89494	1	7995	7995		37.159	0	1	414240	+		37310	16706	24820	24832	42461	42461					0.042629628033296285
NADMDVDAE	9	Unmodified	_NADMDVDAE_					0	0	0		nc|ENSG00000153130|Q9UIL1-3|SCOC	nc|ENSG00000153130|Q9UIL1-3|SCOC	nc|ENSG00000153130|Q9UIL1-3|SCOC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.1894836425781	2	490.187297	978.36004	1.4203	0.00069622	-0.21301	-0.00010441	1.2073	0.0005918	490.18711076213503	104.07	0.94505	104.26	103.72	104.67	0.18887					34	22	2	0	0	0	0.78536	1	12637	12637		29.15	1.2673	1	206830			37311	14999	24821	24833	42462	42462					-0.13000519489492035
NAEDTALLG	9	Unmodified	_NAEDTALLG_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.22869873046875	2	452.224539	902.434526	4.5148	0.0020417	1.6899	0.0007642	6.2046	0.0028059	452.2261030001731	107	0.85062	107.15	106.81	107.66	0.14929					69	29	5	0	0	0	0.67345	1	13060	13060		42.396	6.7778	1	2327200	+		37312	22871	24822	24834	42463	42463					-0.020593886157939778
NAESGRGQVM	10	Unmodified	_NAESGRGQVM_					0	0	0		ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-3|IL32	ENSG00000008517|ENST00000525643|IL32	ENSG00000008517|ENST00000525643|IL32	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.7461547851562	2	524.745647	1047.47674	0.89721	0.00047081	-0.56278	-0.00029531	0.33444	0.00017549	524.7452123615756	25.323	0.69099	24.994	24.703	25.394	-0.32825					29	15	3	0	0	0	0.21391	1	1291	1291		82.75	18.543	1	347830			37313	749	24823	24835	42464	42464					-0.045097364790763095
NAESGRGQVM	10	Unmodified	_NAESGRGQVM_					0	0	0		ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-3|IL32	ENSG00000008517|ENST00000525643|IL32	ENSG00000008517|ENST00000525643|IL32	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.74658203125	2	524.745647	1047.47674	2.6144	0.0013719	-2.7193	-0.0014269	-0.10488	-5.5035E-05	524.74403987466	25.323	0.68957	24.892	24.582	25.272	-0.4311					33	15	3	0	0	0	0.40664	1	1306	1306		63.534	10.597	1	388080			37314	749	24823	24835	42465	42465					-0.045097364790763095
NAFEVAEKY	9	Unmodified	_NAFEVAEKY_					0	0	0		ENST00000588618.5_1_19:39138385-39212431:+|nuORF;ENSG00000130402|ENST00000252699|ACTN4	ENST00000588618.5_1_19:39138385-39212431:+|nuORF	ENST00000588618.5_1_19:39138385-39212431:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7611083984375	2	535.761289	1069.50803	0.21613	0.0001158	0.23794	0.00012748	0.45407	0.00024327	535.7613210664587	49.977	1.0289	50.425	50.061	51.09	0.44761					52	24	4	0	0	0	3.4203E-05	4	4890	4880;4890;4901;4913		152.06	77.806	1	2817700			37315	3644	24824	24836	42466;42467;42468;42469	42467					-0.023948401733377978
NAFEVAEKY	9	Unmodified	_NAFEVAEKY_					0	0	0		ENST00000588618.5_1_19:39138385-39212431:+|nuORF;ENSG00000130402|ENST00000252699|ACTN4	ENST00000588618.5_1_19:39138385-39212431:+|nuORF	ENST00000588618.5_1_19:39138385-39212431:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7609252929688	2	535.761289	1069.50803	0.37659	0.00020176	0.050534	2.7074E-05	0.42712	0.00022883	535.7611973152875	49.763	0.81929	50.608	50.354	51.173	0.84501					47	19	4	0	0	0	0.0029836	4	4891	4871;4879;4891;4904		140.11	62.795	1	3022700			37316	3644	24824	24836	42470;42471;42472;42473	42472					-0.023948401733377978
NAFIPHIWVF	10	Unmodified	_NAFIPHIWVF_					0	0	0		ENST00000423403.1_1_1:61195330-61291150:-|nuORF	ENST00000423403.1_1_1:61195330-61291150:-|nuORF	ENST00000423403.1_1_1:61195330-61291150:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3360595703125	2	622.334759	1242.65496	-0.073789	-4.5921E-05	2.7417	0.0017062	2.6679	0.0016603	622.3363752507829	111.19	1.2568	111.19	110.57	111.83	0					110	41	4	0	0	0	0.85633	1	11580	11580		10.866	0	1	190840			37317	11496	24825	24837	42474	42474					0.043343015022628606
NAFKEITTM	9	Oxidation (M)	_NAFKEITTM(Oxidation (M))_		NAFKEITTM(1)		NAFKEITTM(85)	0	0	1		ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	ENSG00000137947|ENST00000370500|GTF2B	ENSG00000137947|ENST00000370500|GTF2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7625122070312	2	535.762975	1069.5114	-1.8307	-0.00098083	0.9357	0.00050131	-0.89502	-0.00047952	535.7632464404334	42.044	0.46911	42.458	42.237	42.706	0.4139					24	11	3	0	0	0	0.14236	1	3725	3725		85.161	25.043	1	790880			37318	4247	24826	24838	42475	42475		72			-0.02057913391013244
NAFKEITTM	9	Oxidation (M)	_NAFKEITTM(Oxidation (M))_		NAFKEITTM(1)		NAFKEITTM(56)	0	0	1		ENSG00000137947|ENST00000370500|GTF2B;ENST00000486078.1_1_1:89325774-89329699:-|nuORF;ENST00000494819.5_1_1:89324456-89357188:-|nuORF	ENSG00000137947|ENST00000370500|GTF2B	ENSG00000137947|ENST00000370500|GTF2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2882080078125	2	535.762975	1069.5114	-2.011	-0.0010774	1.0157	0.0005442	-0.99522	-0.0005332	535.7632949982467	41.867	0.42949	42.5	42.317	42.746	0.6339					27	10	3	0	0	0	0.20789	1	3717	3717		56.434	18.622	1	908630			37319	4247	24826	24838	42476	42476		72			-0.02057913391013244
NAGAEPNFK	9	Unmodified	_NAGAEPNFK_					0	0	0			REV__ENSG00000080986|ENST00000261597|NDC80	REV__ENSG00000080986|ENST00000261597|NDC80	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.2332763671875	2	474.232699	946.450845	-1.2869	-0.00061028	1.0819	0.00051306	-0.20502	-9.7225E-05	474.23308037889285	39.831	1.0553	39.787	39.407	40.462	-0.043694					35	24	2	0	0	0	0.70638	1	2883	2883		40.058	0.80534	1	313750	+		37320	16813	24827	24839	42477	42477					-0.024522626590396612
NAGDQTAM	8	Unmodified	_NAGDQTAM_					0	0	0			REV__nc|ENSG00000134245|Q93097-2|WNT2B	REV__nc|ENSG00000134245|Q93097-2|WNT2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.1702575683594	2	404.16871	806.322867	-0.2371	-9.5827E-05	2.8329	0.001145	2.5958	0.0010491	404.170169463804	77.716	2.6143	78.284	77.489	80.104	0.56836					167	61	5	0	0	0	0.88601	1	8939	8939		34.173	0.65696	1	22410000	+		37321	19122	24828	24840	42478	42478					-0.0880414624457444
NAGEDPGLAR	10	Unmodified	_NAGEDPGLAR_					0	0	0		ENSG00000161634|ENST00000293371|DCD;nc|ENSG00000161634|P81605-2|DCD	ENSG00000161634|ENST00000293371|DCD	ENSG00000161634|ENST00000293371|DCD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.25115966796875	2	500.246338	998.478122	-0.20374	-0.00010192	0.24734	0.00012373	0.043604	2.1813E-05	500.24629090047296	28.667	0.77091	28.627	28.394	29.165	-0.039907					34	25	2	0	0	0	0.86106	2	1455	1455;1464		33.922	4.7721	1	56319			37322	5645	24829	24841	42479;42480	42479					-0.0211777911866875
NAGKNPIT	8	Unmodified	_NAGKNPIT_					0	0	0		nc|ENSG00000173200|Q460N3-2|PARP15;ENSG00000173200|ENST00000464300|PARP15	nc|ENSG00000173200|Q460N3-2|PARP15	nc|ENSG00000173200|Q460N3-2|PARP15	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78515625	2	407.72451	813.434466	-0.0552	-2.2506E-05	-3.5405	-0.0014436	-3.5957	-0.0014661	407.72490052959125	35.416	0.1715	35.359	35.286	35.458	-0.057514					5	4	2	0	0	0	0.4196	1	1855	1855		15.642	5.3766	1	14005			37323	15101	24830	24842	42481	42481					0.020286561748548593
NAGKVLLP	8	Unmodified	_NAGKVLLP_					0	0	0		ENSG00000181555|ENST00000409792|SETD2	ENSG00000181555|ENST00000409792|SETD2	ENSG00000181555|ENST00000409792|SETD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2571105957031	2	406.255446	810.496338	-1.0502	-0.00042665	4.3192	0.0017547	3.269	0.001328	406.2570843859401	63.493	2.0267	63.523	62.229	64.256	0.030243					140	91	2	0	0	0	0.79929	1	5639	5639		18.324	0	1	164860			37324	7393	24831	24843	42482	42482					0.08351007594001203
NAGQRALAL	9	Unmodified	_NAGQRALAL_					0	0	0			REV__nc|ENSG00000147421|Q6NT76-3|HMBOX1	REV__nc|ENSG00000147421|Q6NT76-3|HMBOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26409912109375	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.78536	1	8290	8290		29.15	1.2673	1	4511100	+		37325	20069	24832	24844	42483	42483					0.054357228488470355
NAGQRALALI	10	Unmodified	_NAGQRALALI_					0	0	0			REV__nc|ENSG00000147421|Q6NT76-3|HMBOX1	REV__nc|ENSG00000147421|Q6NT76-3|HMBOX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.2922973632812	2	513.806365	1025.59818	0.5824	0.00029924	3.9014	0.0020046	4.4838	0.0023038	513.8083267950259	53.676	0.79428	54.09	53.786	54.58	0.4139					27	18	2	0	0	0	0.37624	1	5471	5471		15.642	0	1	108850	+		37326	20069	24833	24845	42484	42484					0.08640253945759468
NAGRRLFE	8	Unmodified	_NAGRRLFE_					0	0	0			REV__ENST00000490008.1_1_3:149469904-149470237:-|nuORF	REV__ENST00000490008.1_1_3:149469904-149470237:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.76666259765625	2	481.761958	961.509363	0.86011	0.00041437	-2.2884	-0.0011025	-1.4283	-0.0006881	481.76076251513746	35.565	0.4903	35.947	35.672	36.163	0.3812					19	12	3	0	0	0	0.4196	1	2705	2705		31.955	0	1	154590	+		37327	18063	24834	24846	42485	42485					0.02706838706092185
NAGTGFAVAE	10	Unmodified	_NAGTGFAVAE_					0	0	0		nc|ENSG00000084234|Q06481-6|APLP2;nc|ENSG00000084234|Q06481-5|APLP2;nc|ENSG00000084234|Q06481-4|APLP2;nc|ENSG00000084234|Q06481-2|APLP2;ENSG00000084234|ENST00000338167|APLP2;nc|ENSG00000084234|Q06481|APLP2;ENST00000533532.5_1_11:129939872-129979518:+|nuORF	nc|ENSG00000084234|Q06481-6|APLP2	nc|ENSG00000084234|Q06481-6|APLP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7239074707031	2	468.724707	935.43486	-0.030537	-1.4313E-05	-3.2322	-0.001515	-3.2628	-0.0015293	468.7232524752806	86.757	0.90463	87.203	86.694	87.599	0.44628					66	21	4	0	0	0	0.80179	1	10211	10211		39.253	3.6345	1	4360600			37328	14791	24835	24847	42486	42486					-0.03543968895951366
NAHSNILK	8	Unmodified	_NAHSNILK_					0	0	0		nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-4|IMMT;ENSG00000132305|ENST00000410111|IMMT;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF	nc|ENSG00000132305|Q16891-3|IMMT	nc|ENSG00000132305|Q16891-3|IMMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.75103759765625	2	448.751059	895.487565	-1.1604	-0.00052074	1.4696	0.00065951	0.30923	0.00013877	448.75149624669854	27.493	1.0894	27.318	27.016	28.105	-0.17559					64	24	5	0	0	0	0.36734	1	1590	1590		99.375	0	1	1128500			37329	3778	24836	24848	42487	42487					0.035640339575252256
NAHSNILK	8	Unmodified	_NAHSNILK_					0	0	0		nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-4|IMMT;ENSG00000132305|ENST00000410111|IMMT;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF	nc|ENSG00000132305|Q16891-3|IMMT	nc|ENSG00000132305|Q16891-3|IMMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.7511291503906	2	448.751059	895.487565	1.4422	0.00064719	-1.4065	-0.00063119	0.03567	1.6007E-05	448.75032560333665	27.525	0.95263	27.271	26.945	27.897	-0.25465					48	21	3	0	0	0	0.11507	2	1603	1603;1626		116.9	5.4664	1	1108300			37330	3778	24836	24848	42488;42489	42488					0.035640339575252256
NAISVTTSY	9	Unmodified	_NAISVTTSY_					0	0	0		ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.23870849609375	2	478.24019	954.465826	0.83491	0.00039929	-1.1356	-0.00054309	-0.30068	-0.0001438	478.23960272954463	53.672	0.9135	54.086	53.581	54.495	0.4139					41	21	3	0	0	0	0.14236	3	5425	5425;5435;5449		85.161	33.968	1	1301100			37331	8317	24837	24849	42490;42491;42492	42490					-0.013228155817159859
NAISVTTSY	9	Unmodified	_NAISVTTSY_					0	0	0		ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.2391052246094	2	478.24019	954.465826	-1.1558	-0.00055274	0.92403	0.00044191	-0.23176	-0.00011084	478.24055752597855	53.49	0.87503	54.104	53.655	54.53	0.61436					40	20	3	0	0	0	0.07589	3	5424	5413;5424;5436		98.629	21.267	1	1370000			37332	8317	24837	24849	42493;42494;42495	42494					-0.013228155817159859
NAITLPEEF	9	Unmodified	_NAITLPEEF_					0	0	0		ENSG00000164754|ENST00000297338|RAD21;chr8:116866761-116874250|49|11.71|0.69|4.09|-|ENST00000519837|RAD21,RAD21;chr8:116866761-116874206|49|14.8|0.54|4.77|-|ENST00000522699|RAD21,RAD21;nc|ENSG00000244588|Q9H4I0-2|RAD21L1;ENSG00000244588|ENST00000683101|RAD21L1;nc|ENSG00000244588|Q9H4I0|RAD21L1	ENSG00000164754|ENST00000297338|RAD21	ENSG00000164754|ENST00000297338|RAD21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2634887695312	2	517.263665	1032.51278	0.34517	0.00017855	-0.26067	-0.00013484	0.084504	4.3711E-05	517.2634070482104	78.975	0.8498	79.386	78.972	79.822	0.4106					50	19	4	0	0	0	0.096131	3	9024	9024;9033;9045		93.195	36.474	1	911970			37333	511	24838	24850	42496;42497;42498	42496					-0.00217956030564892
NAITLPEEF	9	Unmodified	_NAITLPEEF_					0	0	0		ENSG00000164754|ENST00000297338|RAD21;chr8:116866761-116874250|49|11.71|0.69|4.09|-|ENST00000519837|RAD21,RAD21;chr8:116866761-116874206|49|14.8|0.54|4.77|-|ENST00000522699|RAD21,RAD21;nc|ENSG00000244588|Q9H4I0-2|RAD21L1;ENSG00000244588|ENST00000683101|RAD21L1;nc|ENSG00000244588|Q9H4I0|RAD21L1	ENSG00000164754|ENST00000297338|RAD21	ENSG00000164754|ENST00000297338|RAD21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2636108398438	2	517.263665	1032.51278	-0.07057	-3.6503E-05	0.056192	2.9066E-05	-0.014378	-7.4373E-06	517.2635321592115	78.882	0.80534	79.432	79.023	79.828	0.54945					43	18	3	0	0	0	0.30689	2	9072	9042;9072		64.207	5.3864	1	1003500			37334	511	24838	24850	42499;42500	42500					-0.00217956030564892
NAKAQLRRLRQ	11	Unmodified	_NAKAQLRRLRQ_					0	0	0		ENST00000494080.5_1_11:64109091-64110096:+|nuORF;nc|ENSG00000168071|A6NC98-2|CCDC88B;ENST00000463837.5_1_11:64107738-64120281:+|nuORF;nc|ENSG00000168071|A6NC98-4|CCDC88B;ENSG00000168071|ENST00000356786|CCDC88B	ENST00000494080.5_1_11:64109091-64110096:+|nuORF	ENST00000494080.5_1_11:64109091-64110096:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.943603515625	3	451.944376	1352.8113	-1.6541	-0.00074756	-0.56472	-0.00025522	-2.2188	-0.0010028	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.76579	1	4706	4706		18.531	3.8374	1	430100			37335	6365	24839	24851	42501	42501					0.14900559725469975
NAKAQLRRLRQ	11	Unmodified	_NAKAQLRRLRQ_					0	0	0		ENST00000494080.5_1_11:64109091-64110096:+|nuORF;nc|ENSG00000168071|A6NC98-2|CCDC88B;ENST00000463837.5_1_11:64107738-64120281:+|nuORF;nc|ENSG00000168071|A6NC98-4|CCDC88B;ENSG00000168071|ENST00000356786|CCDC88B	ENST00000494080.5_1_11:64109091-64110096:+|nuORF	ENST00000494080.5_1_11:64109091-64110096:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.2773742675781	3	451.944376	1352.8113	-0.47573	-0.000215	-1.8575	-0.00083947	-2.3332	-0.0010545	451.9434025086026	55.358	2.0218	55.331	54.102	56.123	-0.027275					115	58	3	0	0	0	0.76579	1	5026	5026		18.531	1.3643	1	431630			37336	6365	24839	24851	42502	42502					0.14900559725469975
NAKAQLRRLRQ	11	Unmodified	_NAKAQLRRLRQ_					0	0	0		ENST00000494080.5_1_11:64109091-64110096:+|nuORF;nc|ENSG00000168071|A6NC98-2|CCDC88B;ENST00000463837.5_1_11:64107738-64120281:+|nuORF;nc|ENSG00000168071|A6NC98-4|CCDC88B;ENSG00000168071|ENST00000356786|CCDC88B	ENST00000494080.5_1_11:64109091-64110096:+|nuORF	ENST00000494080.5_1_11:64109091-64110096:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9440002441406	3	451.944376	1352.8113	0.028854	1.304E-05	-2.4427	-0.0011039	-2.4138	-0.0010909	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.74405	1	4952	4952		23.378	5.5448	1	513120			37337	6365	24839	24851	42503	42503					0.14900559725469975
NAKAQLRRLRQ	11	Unmodified	_NAKAQLRRLRQ_					0	0	0		ENST00000494080.5_1_11:64109091-64110096:+|nuORF;nc|ENSG00000168071|A6NC98-2|CCDC88B;ENST00000463837.5_1_11:64107738-64120281:+|nuORF;nc|ENSG00000168071|A6NC98-4|CCDC88B;ENSG00000168071|ENST00000356786|CCDC88B	ENST00000494080.5_1_11:64109091-64110096:+|nuORF	ENST00000494080.5_1_11:64109091-64110096:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9430847167969	3	451.944376	1352.8113	0.3266	0.00014761	-3.1108	-0.0014059	-2.7842	-0.0012583	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.71207	1	4365	4365		29.551	10.584	1	721610			37338	6365	24839	24851	42504	42504					0.14900559725469975
NAKAQLRRLRQ	11	Unmodified	_NAKAQLRRLRQ_					0	0	0		ENST00000494080.5_1_11:64109091-64110096:+|nuORF;nc|ENSG00000168071|A6NC98-2|CCDC88B;ENST00000463837.5_1_11:64107738-64120281:+|nuORF;nc|ENSG00000168071|A6NC98-4|CCDC88B;ENSG00000168071|ENST00000356786|CCDC88B	ENST00000494080.5_1_11:64109091-64110096:+|nuORF	ENST00000494080.5_1_11:64109091-64110096:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9440002441406	3	451.944376	1352.8113	0.347	0.00015682	-2.6726	-0.0012079	-2.3256	-0.001051	451.94308439808714	55.355	1.4573	55.446	54.835	56.292	0.091167					122	48	4	0	0	0	0.68431	1	4606	4606		34.087	9.8106	1	477300			37339	6365	24839	24851	42505	42505					0.14900559725469975
NAKIGDLLSF	10	Unmodified	_NAKIGDLLSF_					0	0	0			REV__nc|ENSG00000161905|P16050-2|ALOX15	REV__nc|ENSG00000161905|P16050-2|ALOX15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.8007202148438	2	539.300581	1076.58661	-0.88218	-0.00047576	0.083037	4.4782E-05	-0.79914	-0.00043098	539.3003993125719	60.567	0.56427	61.12	60.855	61.419	0.55323					30	15	3	0	0	0	0.54701	1	6477	6477		52.937	10.541	1	1132800	+		37340	29972	24840	24852	42506	42506					0.05138012131760661
NALARLAPY	9	Unmodified	_NALARLAPY_					0	0	0			REV__ENSG00000232434|ENST00000436881|AJM1	REV__ENSG00000232434|ENST00000436881|AJM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.77996826171875	2	494.782359	987.550165	-1.4939	-0.00073914	-2.7072	-0.0013395	-4.2011	-0.0020786	494.78084579093485	83.794	2.8854	83.932	82.379	85.265	0.13811					127	66	3	0	0	0	0.78536	1	8131	8131		29.15	0.89528	1	242900	+		37341	23771	24841	24853	42507	42507					0.055891800256858915
NALEGFDKADG	11	Unmodified	_NALEGFDKADG_					0	0	0		ENSG00000080166|ENST00000377028|DCT;nc|ENSG00000080166|P40126-2|DCT	ENSG00000080166|ENST00000377028|DCT	ENSG00000080166|ENST00000377028|DCT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.7640991210938	2	568.76456	1135.51457	1.1287	0.00064197	0.23345	0.00013278	1.3622	0.00077475	568.7646112481654	83.583	2.2126	83.642	82.984	85.196	0.059258					128	50	4	0	0	0	0.59499	1	8486	8486		45.022	2.6261	1	1696800			37342	1434	24842	24854	42508	42508					-0.047769470126240776
NALEGFDKADG	11	Unmodified	_NALEGFDKADG_					0	0	0		ENSG00000080166|ENST00000377028|DCT;nc|ENSG00000080166|P40126-2|DCT	ENSG00000080166|ENST00000377028|DCT	ENSG00000080166|ENST00000377028|DCT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.7653198242188	2	568.76456	1135.51457	-0.3787	-0.00021539	2.0044	0.00114	1.6257	0.00092463	568.7655911855649	83.939	1.5521	84.374	83.791	85.343	0.43538					92	37	3	0	0	0	0.55601	1	9745	9745		47.96	1.9873	1	1984100			37343	1434	24842	24854	42509	42509					-0.047769470126240776
NALEGFDKADG	11	Unmodified	_NALEGFDKADG_					0	0	0		ENSG00000080166|ENST00000377028|DCT;nc|ENSG00000080166|P40126-2|DCT	ENSG00000080166|ENST00000377028|DCT	ENSG00000080166|ENST00000377028|DCT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.7654418945312	2	568.76456	1135.51457	0.85198	0.00048457	0.94074	0.00053506	1.7927	0.0010196	568.76493069356	83.965	1.7117	84.42	83.767	85.479	0.45556					113	41	4	0	0	0	0.3478	1	9803	9803		63.426	7.9223	1	2150800			37344	1434	24842	24854	42510	42510					-0.047769470126240776
NALNHTEQY	9	Unmodified	_NALNHTEQY_					0	0	0		ENSG00000146281|ENST00000275072|PM20D2	ENSG00000146281|ENST00000275072|PM20D2	ENSG00000146281|ENST00000275072|PM20D2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.2523803710938	2	545.25162	1088.48869	-0.81727	-0.00044562	-0.37849	-0.00020637	-1.1958	-0.00065199	545.2510586648431	32.2	0.38667	32.326	32.116	32.503	0.12643					14	8	2	0	0	0	0.68711	1	2243	2243		41.427	3.9184	1	128640			37345	4834	24843	24855	42511	42511					-0.05201796464257313
NALNHTEQY	9	Unmodified	_NALNHTEQY_					0	0	0		ENSG00000146281|ENST00000275072|PM20D2	ENSG00000146281|ENST00000275072|PM20D2	ENSG00000146281|ENST00000275072|PM20D2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	545.25162	1088.48869	0.40433	0.00022046	-2.181	-0.0011892	-1.7767	-0.00096873	545.2502248045895	32.176	0.38635	32.283	32.059	32.446	0.10707	-0.02168	-0.00082042	NaN	41.427	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119530			37346	4834	24843	24855							-0.05201796464257313
NALPDTLKVTY	11	Unmodified	_NALPDTLKVTY_					0	0	0		ENSG00000160255|ENST00000652462|ITGB2;ENST00000498666.5_1_21:46313282-46313576:-|nuORF;ENST00000475170.5_1_21:46306285-46313576:-|nuORF	ENSG00000160255|ENST00000652462|ITGB2	ENSG00000160255|ENST00000652462|ITGB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	617.8388061523438	2	617.837528	1233.6605	0.44805	0.00027682	-0.19638	-0.00012133	0.25167	0.00015549	617.8371573002978	62.026	0.73623	62.581	62.3	63.036	0.55449					37	16	3	0	0	0	0.52654	1	6660	6660		50.034	8.6069	1	474070			37347	5573	24844	24856	42512	42512					0.05301935503439381
NALRAIFPSI	10	Unmodified	_NALRAIFPSI_					0	0	0		ENST00000457622.1_1_6:46172676-46173294:+|nuORF	ENST00000457622.1_1_6:46172676-46173294:+|nuORF	ENST00000457622.1_1_6:46172676-46173294:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.3204956054688	2	551.324391	1100.63423	0.065703	3.6224E-05	-3.4663	-0.0019111	-3.4006	-0.0018748	551.3225662732283	34.542	0.59436	34.485	34.216	34.81	-0.056385					20	12	2	0	0	0	0.80179	1	2172	2172		39.253	2.0937	1	72579			37348	11982	24845	24857	42513	42513					0.08793711122598324
NANNKMPKP	9	Unmodified	_NANNKMPKP_					0	0	0			REV__nc|ENSG00000119326|Q9UBT7-3|CTNNAL1	REV__nc|ENSG00000119326|Q9UBT7-3|CTNNAL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3793640136719	2	507.263476	1012.5124	0.97367	0.00049391	-4.3965	-0.0022302	-3.4228	-0.0017363	507.26109020054554	64.666	0.55615	65.22	64.772	65.328	0.55386					19	13	3	0	0	0	0.20789	1	6964	6964		15.642	0	1	125610	+		37349	18350	24846	24858	42514	42514					0.00664345768586827
NANRITSLL	9	Unmodified	_NANRITSLL_					0	0	0		nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR;ENSG00000163946|ENST00000683822|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2906188964844	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.55097	1	10577	10577		49.442	0	1	9038000			37350	5890	24847	24859	42515	42515					0.06628261191815454
NAPNIGLNQLQ	11	Unmodified	_NAPNIGLNQLQ_					0	0	0			REV__ENSG00000141367|ENST00000269122|CLTC	REV__ENSG00000141367|ENST00000269122|CLTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	591.3187255859375	2	591.317294	1180.62004	0.11826	6.9931E-05	4.2846	0.0025335	4.4028	0.0026035	591.3195203707345	66.847	0.7553	66.811	66.494	67.25	-0.035698					74	33	3	0	0	0	0.65746	1	6381	6381		37.812	0.30334	1	235530	+		37351	19676	24848	24860	42516	42516					0.03695013903643485
NAQLKITR	8	Unmodified	_NAQLKITR_					0	0	0			REV__nc|ENSG00000123908|Q9UKV8-2|AGO2	REV__nc|ENSG00000123908|Q9UKV8-2|AGO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2875671386719	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.87922	1	10327	10327		31.955	4.0726	1	48574000	+		37352	18550	24849	24861	42517	42517					0.0874858239999412
NAQSAGEM	8	Unmodified	_NAQSAGEM_					0	0	0			REV__nc|ENSG00000142784|Q8N5D0-4|WDTC1	REV__nc|ENSG00000142784|Q8N5D0-4|WDTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.170166015625	2	404.16871	806.322867	2.4772	0.0010012	0.73353	0.00029647	3.2107	0.0012977	404.16914392538314	78.456	2.0058	78.508	78.086	80.092	0.051682					179	62	5	0	0	0	0.87064	1	7694	7694		29.15	1.2673	1	6709200	+		37353	19754	24850	24862	42518	42518					-0.08804146244585809
NASCIDAN	8	Unmodified	_NASCIDAN_					0	0	0		ENSG00000187957|ENST00000341772|DNER	ENSG00000187957|ENST00000341772|DNER	ENSG00000187957|ENST00000341772|DNER	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.1701965332031	2	404.16871	806.322867	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.866	1	80.922	80.422	81.422	0.055916								0	0	0	0.29596	1	8035	8035		35.618	1.4457	1				37354	7894	24851	24863	42519	42519					-0.08804146244597177
NASLVEGWF	9	Unmodified	_NASLVEGWF_					0	0	0		ENST00000591651.5_1_17:74373428-74381645:+|nuORF	ENST00000591651.5_1_17:74373428-74381645:+|nuORF	ENST00000591651.5_1_17:74373428-74381645:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.820556640625	2	511.750724	1021.4869	0.52745	0.00026992	2.6285	0.0013451	3.1559	0.001615	511.7517105885868	82.197	0.89087	82.671	82.239	83.13	0.47383					46	21	3	0	0	0	0.20789	1	9528	9528		53.351	0	1	547030			37355	14277	24852	24864	42520	42520					-0.02298805482178068
NATEMECMFCS	11	Unmodified	_NATEMECMFCS_					0	0	0			REV__ENST00000590244.1_1_17:58543761-58603427:-|nuORF	REV__ENST00000590244.1_1_17:58543761-58603427:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.21630859375	2	633.218902	1264.42325	-0.2395	-0.00015166	-3.647	-0.0023093	-3.8865	-0.002461	633.2169254592142	29.829	0.50794	29.786	29.507	30.015	-0.043095					23	11	3	0	0	0	0.78986	1	1588	1588		13.454	0.64233	1	69402	+		37356	29176	24853	24865	42521	42521					-0.19838361359757073
NATKKIEKN	9	Unmodified	_NATKKIEKN_					0	0	0			REV__nc|ENSG00000111450|P32856-3|STX2	REV__nc|ENSG00000111450|P32856-3|STX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3045043945312	2	523.303655	1044.59276	-0.50611	-0.00026485	0.28637	0.00014986	-0.21974	-0.00011499	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.79277	1	9979	9979		27.047	0.3544	1	3970100	+		37357	17870	24854	24866	42522	42522					0.07224530363305348
NATLNRGLV	9	Unmodified	_NATLNRGLV_					0	0	0			REV__ENSG00000138433|ENST00000342016|CIR1	REV__ENSG00000138433|ENST00000342016|CIR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2795104980469	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.78536	1	7502	7502		29.15	0	1	1311100	+		37358	19472	24855	24867	42523	42523					0.060319920203255606
NATPEASVKL	10	Unmodified	_NATPEASVKL_					0	0	0			REV__ENSG00000177459|ENST00000318528|ERICH5	REV__ENSG00000177459|ENST00000318528|ERICH5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.281982421875	2	515.282389	1028.55022	-0.092953	-4.7897E-05	-0.014147	-7.2898E-06	-0.1071	-5.5187E-05	515.282063913411	49.092	0.60685	49.552	49.223	49.83	0.45983					28	14	3	0	0	0	0.27582	1	4773	4773		75.043	3.1658	1	794820	+		37359	22204	24856	24868	42524	42524					0.03709135235044414
NATPSPVPS	9	Unmodified	_NATPSPVPS_					0	0	0			REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2232666015625	2	435.2218	868.429047	1.1398	0.00049606	2.7676	0.0012045	3.9074	0.0017006	435.2228723544136	94.167	0.8138	94.599	94.344	95.158	0.4324					35	21	2	0	0	0	0.58668	1	11249	11249		47.657	4.0313	1	998480	+		37360	18066	24857	24869	42525	42525					-0.010430674076133073
NATPSPVPS	9	Unmodified	_NATPSPVPS_					0	0	0			REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2239990234375	2	435.2218	868.429047	0.32239	0.00014031	3.6661	0.0015956	3.9885	0.0017359	435.223399209331	94.324	0.97275	94.759	94.514	95.487	0.43539					50	24	3	0	0	0	0.55097	1	11303	11303		49.442	13.823	1	1317400	+		37361	18066	24857	24869	42526	42526					-0.010430674076133073
NATPSPVPS	9	Unmodified	_NATPSPVPS_					0	0	0			REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	435.2218	868.429047	1.8196	0.00079192	2.1094	0.00091806	3.929	0.00171	435.22262500260797	94.394	0.74666	94.335	94.059	94.805	-0.059212	0.018251	-0.00084965	NaN	47.657	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	303790	+		37362	18066	24857	24869							-0.010430674076133073
NATPSPVPS	9	Unmodified	_NATPSPVPS_					0	0	0			REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	435.2218	868.429047	2.2529	0.0009805	2.1103	0.00091843	4.3631	0.0018989	435.2226062884535	94.166	0.65179	94.212	93.966	94.618	0.046173	-0.10438	-0.00084891	NaN	47.657	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	309300	+		37363	18066	24857	24869							-0.010430674076133073
NATPSPVPS	9	Unmodified	_NATPSPVPS_					0	0	0			REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	435.2218	868.429047	-1.5373	-0.00066909	5.4781	0.0023842	3.9408	0.0017151	435.2240730780756	93.918	0.5697	94.146	93.955	94.525	0.22862	-0.17065	0.0020826	NaN	47.657	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	470020	+		37364	18066	24857	24869							-0.010430674076133073
NATPSPVPS	9	Unmodified	_NATPSPVPS_					0	0	0			REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	REV__nc|ENSG00000114790|Q96DR7-3|ARHGEF26	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	435.2218	868.429047	-1.8231	-0.00079346	6.1229	0.0026648	4.2998	0.0018713	435.2242555896506	94.093	0.73285	94.291	93.956	94.688	0.19827	-0.025632	0.0026438	NaN	47.657	19	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	345420	+		37365	18066	24857	24869							-0.010430674076133073
NAVGPPFTW	9	Unmodified	_NAVGPPFTW_					0	0	0		ENST00000511850.1_1_5:138858703-138860965:-|nuORF;ENST00000507297.5_1_5:138860740-138860965:-|nuORF;ENST00000515507.5_1_5:138860386-138861812:-|nuORF;ENST00000509573.5_1_5:138855949-138860944:-|nuORF;ENSG00000184584|ENST00000330794|STING1	ENST00000511850.1_1_5:138858703-138860965:-|nuORF	ENST00000511850.1_1_5:138858703-138860965:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7460632324219	2	494.747985	987.481417	-0.92883	-0.00045954	-2.9106	-0.00144	-3.8394	-0.0018996	494.746405987862	20.119	0.36457	20.049	19.903	20.268	-0.070013					31	15	3	0	0	0	0.64922	1	486	486		44.117	1.7207	1	104440			37366	13026	24858	24870	42527	42527					-0.01282484274008766
NAVIAPKS	8	Unmodified	_NAVIAPKS_					0	0	0		ENSG00000198887|ENST00000361138|SMC5	ENSG00000198887|ENST00000361138|SMC5	ENSG00000198887|ENST00000361138|SMC5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2254943847656	2	400.237253	798.459953	0.66088	0.00026451	-1.8056	-0.00072267	-1.1447	-0.00045816	400.2364879171767	50.189	0.44407	51.034	50.851	51.295	0.84501					12	10	2	0	0	0	0.4196	1	4971	4971		15.642	0	1	400170			37367	8359	24859	24871	42528	42528					0.052661306972822786
NAVKDFTSF	9	Unmodified	_NAVKDFTSF_					0	0	0		ENSG00000168769|ENST00000380013|TET2;nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2	ENSG00000168769|ENST00000380013|TET2	ENSG00000168769|ENST00000380013|TET2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.7549438476562	2	514.756007	1027.49746	0.63112	0.00032487	-0.91072	-0.0004688	-0.2796	-0.00014393	514.7554643143162	55.166	0.62688	55.567	55.28	55.907	0.40101					33	14	3	0	0	0	0.096326	2	5652	5641;5652		93.143	38.367	1	682900			37368	6432	24860	24872	42529;42530	42530					-0.015188228277793314
NAVKDFTSF	9	Unmodified	_NAVKDFTSF_					0	0	0		ENSG00000168769|ENST00000380013|TET2;nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2	ENSG00000168769|ENST00000380013|TET2	ENSG00000168769|ENST00000380013|TET2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.7545776367188	2	514.756007	1027.49746	0.13034	6.7091E-05	-0.56484	-0.00029076	-0.43451	-0.00022367	514.7555571478608	54.956	0.6293	55.524	55.236	55.866	0.56836					33	14	3	0	0	0	0.017216	1	5638	5638		127.46	53.207	1	736030			37369	6432	24860	24872	42531	42531					-0.015188228277793314
NAVLIHFR	8	Unmodified	_NAVLIHFR_					0	0	0			REV__nc|ENSG00000175662|Q6ZVM7-3|TOM1L2	REV__nc|ENSG00000175662|Q6ZVM7-3|TOM1L2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	485.2864990234375	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.31	1	64.31	63.81	64.81	0								0	0	0	0.29452	1	5650	5650		33.516	1.5607	1		+		37370	22079	24861	24873	42532	42532					0.07004903608185487
NAVLLVLCV	9	Unmodified	_NAVLLVLCV_					0	0	0			REV__nc|ENSG00000122490|Q8N2U9-2|SLC66A2	REV__nc|ENSG00000122490|Q8N2U9-2|SLC66A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2874755859375	2	472.285889	942.557224	0.76193	0.00035985	3.8005	0.0017949	4.5625	0.0021548	472.28771256093336	99.111	1.7073	99.267	98.769	100.48	0.15659					91	39	3	0	0	0	0.7932	1	10335	10335		24.203	3.2558	1	525470	+		37371	18499	24862	24874	42533	42533					0.08364776581913702
NAVLVILP	8	Unmodified	_NAVLVILP_					0	0	0			REV__ENSG00000269743|ENST00000594199|SLC25A53	REV__ENSG00000269743|ENST00000594199|SLC25A53	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7742004394531	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.88915	1	3494	3494		35.201	1.6851	1	11423000	+		37372	23976	24863	24875	42534	42534					0.10712464770847419
NAVTVKKAYL	10	Unmodified	_NAVTVKKAYL_					0	0	0		ENST00000587557.5_1_19:9452644-9452737:+|nuORF	ENST00000587557.5_1_19:9452644-9452737:+|nuORF	ENST00000587557.5_1_19:9452644-9452737:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.83447265625	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.86718	1	8527	8527		27.882	0	1	1728300			37373	14195	24864	24876	42535	42535					0.10094577919812764
NAVVGHYTQ	9	Unmodified	_NAVVGHYTQ_					0	0	0		ENSG00000124490|ENST00000339139|CRISP2;nc|ENSG00000096006|P54108|CRISP3;ENSG00000096006|ENST00000263045|CRISP3;nc|ENSG00000096006|P54108-3|CRISP3;nc|ENSG00000124490|P16562-2|CRISP2	ENSG00000124490|ENST00000339139|CRISP2	ENSG00000124490|ENST00000339139|CRISP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7469787597656	2	494.745973	987.477394	-0.92884	-0.00045954	1.1549	0.00057136	0.22601	0.00011182	494.746405987862	20.119	0.36457	20.049	19.903	20.268	-0.070013					31	15	3	0	0	0	0.64555	1	480	480		44.377	7.9304	1	104440			37374	1737	24865	24877	42536	42536					-0.016845737677158468
NAVVKAIP	8	Unmodified	_NAVVKAIP_					0	0	0		ENSG00000112139|ENST00000434837|MDGA1;nc|ENSG00000112139|Q8NFP4-2|MDGA1	ENSG00000112139|ENST00000434837|MDGA1	ENSG00000112139|ENST00000434837|MDGA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.257080078125	2	406.255446	810.496338	0.018638	7.5718E-06	3.5962	0.001461	3.6148	0.0014685	406.2568104671837	38.391	1.0373	38.363	37.994	39.031	-0.027843					57	23	3	0	0	0	0.79929	1	2625	2625		18.324	0.95945	1	345700			37375	2634	24866	24878	42537	42537					0.08351007593978466
NAVVLLGIVY	10	Unmodified	_NAVVLLGIVY_					0	0	0			REV__ENSG00000176547|ENST00000319856|OR4C3	REV__ENSG00000176547|ENST00000319856|OR4C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8206787109375	2	530.823692	1059.63283	-1.3153	-0.00069821	-4.3307	-0.0022989	-5.646	-0.0029971	530.821502391275	82.322	1.7995	82.448	81.931	83.731	0.12601					101	41	4	0	0	0	0.85939	1	7832	7832		23.042	2.0956	1	1875200	+		37376	22134	24867	24879	42538	42538					0.10540077033851958
NAYRNKPK	8	Unmodified	_NAYRNKPK_					0	0	0			REV__ENSG00000142949|ENST00000359947|PTPRF;REV__nc|ENSG00000153707|P23468-2|PTPRD;REV__nc|ENSG00000153707|P23468-7|PTPRD;REV__nc|ENSG00000105426|Q13332-7|PTPRS	REV__ENSG00000142949|ENST00000359947|PTPRF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.26019287109375	2	495.777608	989.540663	1.0608	0.00052594	-2.6808	-0.0013291	-1.62	-0.00080314	495.7762320388246	34.86	0.38445	35.241	35.02	35.404	0.3812					13	9	2	0	0	0	0.4196	1	2619	2619		68.485	45.442	1	144820	+		37377	19763;20354;29937;17538	24868	24880	42539	42539					0.04547411740179541
NAYSYSYY	8	Unmodified	_NAYSYSYY_					0	0	0		ENSG00000196090|ENST00000373187|PTPRT;nc|ENSG00000196090|O14522-1|PTPRT	ENSG00000196090|ENST00000373187|PTPRT	ENSG00000196090|ENST00000373187|PTPRT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	515.7086181640625	2	515.711265	1029.40798	0.33636	0.00017346	-4.2512	-0.0021924	-3.9149	-0.0020189	515.7089237116219	29.849	0.9094	29.874	29.538	30.447	0.025013					58	23	4	0	0	0	0.88944	1	1489	1489		57.811	3.035	1	300030			37378	8010	24869	24881	42540	42540					-0.10555077507137867
NCCMNVII	8	2 Carbamidomethyl (C)	_NC(Carbamidomethyl (C))C(Carbamidomethyl (C))MNVII_	NC(1)C(1)MNVII		NC(45)C(45)MNVII		0	2	0			REV__nc|ENSG00000155393|Q7Z4Q2-3|HEATR3	REV__nc|ENSG00000155393|Q7Z4Q2-3|HEATR3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.08740234375	2	512.224648	1022.43474	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.839	1	67.899	67.399	68.399	0.059288								0	0	0	0.30609	1	6062	6062		44.531	11.719	1		+		37379	20428	24870	24882	42541	42541	257;258				-0.0755775148346629
NCHEEDCTAGG	11	Unmodified	_NCHEEDCTAGG_					0	0	0			REV__nc|ENSG00000146530|Q8N2E2-3|VWDE	REV__nc|ENSG00000146530|Q8N2E2-3|VWDE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.1911010742188	2	568.192587	1134.37062	1.1538	0.0006556	-1.8414	-0.0010463	-0.68761	-0.00039069	568.191496061514	24.425	1.9431	24.382	23.444	25.387	-0.043221					101	52	3	0	0	0	0.75544	1	940	940		20.837	4.364	1	65822	+		37380	20022	24871	24883	42542	42542					-0.1911886010670969
NCKEEFQIHD	10	Unmodified	_NCKEEFQIHD_					0	0	0		ENSG00000107719|ENST00000263563|PALD1	ENSG00000107719|ENST00000263563|PALD1	ENSG00000107719|ENST00000263563|PALD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.5202941894531	3	421.520522	1261.53974	2.3072	0.00097253	-1.8313	-0.00077193	0.4759	0.0002006	421.5196057482199	31.372	0.62619	31.361	31.093	31.719	-0.010656					32	14	3	0	0	0	0.86587	1	1710	1710		29.17	2.1227	1	102480			37381	2360	24872	24884	42543	42543					-0.08057215481699131
NCKSICIKKK	10	Unmodified	_NCKSICIKKK_					0	0	0			REV__ENST00000515800.6_1_5:86667940-86686697:+|nuORF	REV__ENST00000515800.6_1_5:86667940-86686697:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.8330078125	2	582.833211	1163.65187	0.82789	0.00048252	-1.686	-0.00098264	-0.85809	-0.00050012	582.8322150120989	94.225	3.555	94.386	93.365	96.92	0.16119					184	84	3	0	0	0	0.86272	1	9551	9551		24.519	1.4767	1	780120	+		37382	28041	24873	24885	42544	42544					0.07658967061593103
NCLTITFEYI	10	Unmodified	_NCLTITFEYI_					0	0	0			REV__nc|ENSG00000042781|O75445-3|USH2A	REV__nc|ENSG00000042781|O75445-3|USH2A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	608.8322143554688	2	608.799557	1215.58456	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.196	1	67.329	66.829	67.829	0.13326								0	0	0	0.45132	1	5989	5989		23.042	0.46283	1		+		37383	16330	24874	24886	42545	42545					-0.014607846683475145
NCLTLNCR	8	Unmodified	_NCLTLNCR_					0	0	0		ENST00000357575.8_1_18:77662479-77662542:-|nuORF	ENST00000357575.8_1_18:77662479-77662542:-|nuORF	ENST00000357575.8_1_18:77662479-77662542:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.7221374511719	2	468.723129	935.431706	-0.82424	-0.00038634	1.153	0.00054044	0.32877	0.0001541	468.7236330503741	70.3	0.63596	70.262	70.051	70.687	-0.037865					55	33	2	0	0	0	0.8537	1	6849	6849		25.574	1.0549	1	322340			37384	10390	24875	24887	42546	42546					-0.03859258545969624
NCRQIQSD	8	Unmodified	_NCRQIQSD_					0	0	0			REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.2190856933594	2	482.219266	962.423978	0.016937	8.1674E-06	2.7292	0.0013161	2.7462	0.0013243	482.22047559992177	56.903	0.66754	57.459	57.181	57.848	0.55512					23	15	2	0	0	0	0.87922	1	5895	5895		31.955	0	1	497770	+		37385	19793	24876	24888	42547	42547					-0.05873694541878649
NCRQIQSD	8	Unmodified	_NCRQIQSD_					0	0	0			REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	482.219266	962.423978	-0.40833	-0.0001969	3.3012	0.0015919	2.8928	0.001395	482.22073831413036	56.996	0.58132	57.393	57.16	57.741	0.39672	-0.032895	0.00027886	NaN	31.955	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	472980	+		37386	19793	24876	24888							-0.05873694541878649
NDAANVDAHY	10	Unmodified	_NDAANVDAHY_					0	0	0			REV__nc|ENSG00000151458|Q9ULJ7-2|ANKRD50	REV__nc|ENSG00000151458|Q9ULJ7-2|ANKRD50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.734375	2	545.233427	1088.4523	-0.32548	-0.00017746	-3.3088	-0.001804	-3.6342	-0.0019815	545.2313743460636	55.86	0.50243	55.823	55.56	56.063	-0.036823					42	19	3	0	0	0	0.77314	1	4718	4718		40.778	1.972	1	216120	+		37387	20249	24877	24889	42548	42548					-0.08838673360946814
NDAIELLL	8	Unmodified	_NDAIELLL_					0	0	0			REV__nc|ENSG00000065413|Q8N8A2-2|ANKRD44	REV__nc|ENSG00000065413|Q8N8A2-2|ANKRD44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7545166015625	2	450.755475	899.496398	-1.5537	-0.00070033	-1.298	-0.00058508	-2.8517	-0.0012854	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.91977	1	7742	7742		45.952	1.4209	1	298090	+		37388	16499	24878	24890	42549	42549					0.04262962803340997
NDAYYGLLP	9	Unmodified	_NDAYYGLLP_					0	0	0			REV__ENSG00000163898|ENST00000296252|LIPH	REV__ENSG00000163898|ENST00000296252|LIPH	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.2535400390625	2	513.250557	1024.48656	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.806	1	54.897	54.397	55.397	0.091167								0	0	0	0.34972	1	4555	4555		47.657	6.8792	1		+		37389	20993	24879	24891	42550	42550					-0.024702252020460946
NDCEKVFNQ	9	Unmodified	_NDCEKVFNQ_					0	0	0		ENST00000585612.1_1_19:56934624-56945194:+|nuORF;ENSG00000198440|ENST00000333201|ZNF583	ENST00000585612.1_1_19:56934624-56945194:+|nuORF	ENST00000585612.1_1_19:56934624-56945194:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.7403564453125	2	548.740031	1095.46551	0.087817	4.8188E-05	-3.1635	-0.001736	-3.0757	-0.0016878	548.7380955718754	34.842	0.36969	34.785	34.632	35.001	-0.056385					11	8	2	0	0	0	0.7932	1	2214	2214		26.693	1.1189	1	14262			37390	8272	24880	24892	42551	42551					-0.0784055857320709
NDDLRLEELT	10	Unmodified	_NDDLRLEELT_					0	0	0			REV__nc|ENSG00000126500|Q9NZU1-1|FLRT1	REV__nc|ENSG00000126500|Q9NZU1-1|FLRT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5872497558594	3	406.538458	1216.59355	-0.016133	-6.5587E-06	1.474	0.00059922	1.4578	0.00059267	406.53894541843056	30.65	0.75232	30.679	30.362	31.114	0.028618					44	16	4	0	0	0	0.37624	1	2054	2054		12.957	0	1	928830	+		37391	15499	24881	24893	42552	42552					-0.00608719778347222
NDDPDEDH	8	Unmodified	_NDDPDEDH_					0	0	0		ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.6642150878906	2	478.665043	955.315533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.164	1	70.548	70.048	71.048	0.38416								0	0	0	0.3037	1	7766	7766		18.324	0	1				37392	4859	24882	24894	42553	42553					-0.16391207311323797
NDDPDEDH	8	Unmodified	_NDDPDEDH_					0	0	0		ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.66424560546875	2	478.665043	955.315533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.043	1	71.427	70.927	71.927	0.38449								0	0	0	0.30252	1	7892	7892		19.36	1.0356	1				37393	4859	24882	24894	42554	42554					-0.16391207311323797
NDDPDEDH	8	Unmodified	_NDDPDEDH_					0	0	0		ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.6644287109375	2	478.665043	955.315533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.624	1	71.171	70.671	71.671	0.54756								0	0	0	0.29353	1	7865	7865		28.254	0.37203	1				37394	4859	24882	24894	42555	42555					-0.16391207311323797
NDDQDGIP	8	Unmodified	_NDDQDGIP_					0	0	0			REV__nc|ENSG00000152592|Q13316-2|DMP1	REV__nc|ENSG00000152592|Q13316-2|DMP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2655334472656	2	437.182872	872.35119	0.078293	3.4228E-05	-3.4404	-0.0015041	-3.3622	-0.0014699	437.18141291113733	25.481	0.33665	25.224	25.087	25.424	-0.2572					12	7	2	0	0	0	0.4196	1	1342	1342		32.812	0	1	19601	+		37395	15843	24883	24895	42556	42556					-0.09009125063641932
NDDVYRVP	8	Unmodified	_NDDVYRVP_					0	0	0		ENST00000432307.1_1_X:110864088-110864580:-|nuORF	ENST00000432307.1_1_X:110864088-110864580:-|nuORF	ENST00000432307.1_1_X:110864088-110864580:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.2366638183594	2	489.237981	976.461409	-1.3472	-0.00065908	-1.2202	-0.00059695	-2.5673	-0.001256	489.23722869031667	63.74	1.1993	63.74	63.341	64.54	0					123	57	3	0	0	0	0.87479	1	5605	5605		30.504	0	1	324370			37396	11662	24884	24896	42557	42557					-0.02776280004616183
NDFRLGAL	8	Unmodified	_NDFRLGAL_					0	0	0			REV__ENST00000380903.6_1_22:50639465-50655786:+|nuORF	REV__ENST00000380903.6_1_22:50639465-50655786:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.2466125488281	2	453.245609	904.476666	-0.29141	-0.00013208	4.0284	0.0018258	3.7369	0.0016938	453.2473594362792	31.029	0.87944	30.982	30.692	31.571	-0.047062					35	21	2	0	0	0	0.89043	1	1725	1725		35.618	0.41757	1	68791	+		37397	16669	24885	24897	42558	42558					0.020606315832424116
NDGTDGQKL	9	Unmodified	_NDGTDGQKL_					0	0	0		ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	ENSG00000125810|ENST00000246006|CD93	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.22271728515625	2	474.225071	946.435589	-0.93499	-0.00044339	-3.7911	-0.0017978	-4.7261	-0.0022412	474.2234010405558	66.547	1.5603	67.098	66.602	68.163	0.55071					86	44	4	0	0	0	0.66686	1	7293	7293		42.864	4.0581	1	724640			37398	3416	24886	24898	42559	42559					-0.03977174246881532
NDGYVHIHPS	10	Unmodified	_NDGYVHIHPS_					0	0	0		ENSG00000163214|ENST00000457308|DHX57;ENST00000497514.2_1_2:39033679-39046075:-|nuORF	ENSG00000163214|ENST00000457308|DHX57	ENSG00000163214|ENST00000457308|DHX57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.7658081054688	2	569.767437	1137.52032	0.50789	0.00028938	-1.6407	-0.0009348	-1.1328	-0.00064543	569.7663611831885	60.525	0.47499	60.641	60.356	60.831	0.11676					53	19	3	0	0	0	0.85934	1	5260	5260		35.618	1.4457	1	513000			37399	5775	24887	24899	42560	42560					-0.0429380371026582
NDIDKRVEVK	10	Unmodified	_NDIDKRVEVK_					0	0	0		nc|ENSG00000107864|Q8NE35-2|CPEB3;ENSG00000107864|ENST00000265997|CPEB3	nc|ENSG00000107864|Q8NE35-2|CPEB3	nc|ENSG00000107864|Q8NE35-2|CPEB3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78515625	3	405.894577	1214.6619	0.013395	5.437E-06	0.37103	0.0001506	0.38442	0.00015603	405.89459759582684	30.775	0.61027	30.779	30.491	31.101	0.0037212					31	13	3	0	0	0	0.37624	1	2077	2077		19.263	0	1	657750			37400	2377	24888	24900	42561	42561					0.06315569592175052
NDIIRNKDD	9	Unmodified	_NDIIRNKDD_					0	0	0		ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B	ENSG00000008869|ENST00000233099|HEATR5B	ENSG00000008869|ENST00000233099|HEATR5B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.2774658203125	2	551.778002	1101.54145	-0.6112	-0.00033724	1.5365	0.00084782	0.92532	0.00051057	551.778886720034	79.179	0.7647	79.59	79.226	79.991	0.41059					30	17	3	0	0	0	0.20789	1	9068	9068		40.058	4.4399	1	445400			37401	751	24889	24901	42562	42562					-0.005258384014496187
NDIMKVHR	8	Oxidation (M)	_NDIM(Oxidation (M))KVHR_		NDIM(1)KVHR		NDIM(42)KVHR	0	0	1			REV__nc|ENSG00000147852|P98155-2|VLDLR	REV__nc|ENSG00000147852|P98155-2|VLDLR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.7733154296875	2	514.768926	1027.5233	1.3658	0.00070307	4.4382	0.0022847	5.804	0.0029877	514.7710878109294	23.659	0.51255	23.085	22.792	23.304	-0.57415					19	11	2	0	0	0	0.90983	1	1066	1066		42.396	10.762	1	134180	+		37402	20087	24890	24902	42563	42563		295			0.010637481428830142
NDKEVNLAR	9	Unmodified	_NDKEVNLAR_					0	0	0		L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|56|2|sense	L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|56|2|sense	L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|56|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.7808837890625	2	529.783087	1057.55162	0.42447	0.00022488	-4.231	-0.0022415	-3.8065	-0.0020166	529.7806756835065	55.443	1.0138	55.534	55.225	56.239	0.091167					76	34	3	0	0	0	0.78124	1	4673	4673		30.318	1.1682	1	514560			37403	14543	24891	24903	42564	42564					0.025147693238068314
NDKQVNLCL	9	Unmodified	_NDKQVNLCL_					0	0	0		ENST00000585456.1_1_18:61026935-61034351:-|nuORF	ENST00000585456.1_1_18:61026935-61034351:-|nuORF	ENST00000585456.1_1_18:61026935-61034351:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7664794921875	2	523.768591	1045.52263	0.89554	0.00046906	-4.2612	-0.0022319	-3.3656	-0.0017628	523.7663129823885	53.949	0.79308	54.36	54.034	54.827	0.41127					48	18	4	0	0	0	0.14115	1	5476	5476		85.359	0.44396	1	2607300			37404	14148	24892	24904	42565	42565					0.0016890870315364737
NDKTARGLTI	10	Unmodified	_NDKTARGLTI_					0	0	0			REV__ENST00000549000.1_1_12:49952961-49953168:-|nuORF	REV__ENST00000549000.1_1_12:49952961-49953168:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3101806640625	2	544.806562	1087.59857	-1.6224	-0.0008839	1.2636	0.00068842	-0.35882	-0.00019548	544.8072830574172	24.958	0.43481	24.958	24.631	25.066	0					27	19	2	0	0	0	0.86698	1	876	876		28.081	1.2854	1	37917	+		37405	22947	24893	24905	42566	42566					0.05827628874953916
NDLAETSN	8	Unmodified	_NDLAETSN_					0	0	0			REV__ENSG00000089022|ENST00000550735|MAPKAPK5	REV__ENSG00000089022|ENST00000550735|MAPKAPK5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.19097900390625	2	432.190697	862.36684	1.5766	0.00068141	-0.067192	-2.904E-05	1.5094	0.00065237	432.1906344954285	100.84	0.64096	101.14	100.77	101.41	0.2999					42	15	4	0	0	0	0.91116	1	12242	12242		42.864	0.46813	1	364510	+		37406	16955	24894	24906	42567	42567					-0.06984838546622996
NDLDSALIPVI	11	Unmodified	_NDLDSALIPVI_					0	0	0		ENSG00000039319|ENST00000505560|ZFYVE16	ENSG00000039319|ENST00000505560|ZFYVE16	ENSG00000039319|ENST00000505560|ZFYVE16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.3251342773438	2	585.324254	1168.63395	-0.71761	-0.00042004	0.73119	0.00042798	0.013575	7.946E-06	585.3244266120178	59.508	0.6635	60.061	59.692	60.355	0.55323					36	16	3	0	0	0	0.33869	2	6306	6277;6306		64.207	4.089	1	928540			37407	922	24895	24907	42568;42569	42569					0.05638246612079456
NDLENIIPF	9	Unmodified	_NDLENIIPF_					0	0	0		ENSG00000008394|ENST00000396210|MGST1;ENST00000539708.5_1_12:16513351-16516972:+|nuORF	ENSG00000008394|ENST00000396210|MGST1	ENSG00000008394|ENST00000396210|MGST1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.7774658203125	2	537.776939	1073.53933	-0.29975	-0.0001612	0.24659	0.00013261	-0.053156	-2.8586E-05	537.7769840887917	85.641	0.82797	86.083	85.702	86.53	0.44236					54	19	4	0	0	0	0.44421	1	10025	10025		54.776	5.3348	1	804190			37408	746	24896	24908	42570	42570					0.005497328607589225
NDLGNQGLKK	10	Unmodified	_NDLGNQGLKK_					0	0	0			REV__ENST00000510365.5_1_4:8376552-8417570:-|nuORF	REV__ENST00000510365.5_1_4:8376552-8417570:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.796630859375	2	543.798737	1085.58292	-1.3241	-0.00072002	-4.1298	-0.0022458	-5.4539	-0.0029658	543.7963351604897	28.74	0.75562	28.711	28.328	29.084	-0.029207					36	15	3	0	0	0	0.85981	1	1768	1768		35.152	3.6222	1	392250	+		37409	16918	24897	24909	42571	42571					0.043553423578941874
NDLIRAKQ	8	Unmodified	_NDLIRAKQ_					0	0	0		nc|ENSG00000172717|Q8N9W8-2|GARIN2;ENSG00000172717|ENST00000696955|GARIN2;nc|ENSG00000172717|Q8N9W8|GARIN2	nc|ENSG00000172717|Q8N9W8-2|GARIN2	nc|ENSG00000172717|Q8N9W8-2|GARIN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27838134765625	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.90983	1	10129	10129		42.396	1.8235	1	6350300			37410	6785	24898	24910	42572	42572					0.06031992020314192
NDLLPRKK	8	Unmodified	_NDLLPRKK_					0	0	0			REV__nc|ENSG00000173889|Q8NDX5-2|PHC3	REV__nc|ENSG00000173889|Q8NDX5-2|PHC3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.2999267578125	2	492.303458	982.592364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.883	1	58.883	58.383	59.383	0								0	0	0	0.29568	1	5113	5113		35.201	1.0282	1		+		37411	21958	24899	24911	42573	42573					0.10037155434088163
NDLLRRLTVD	10	Unmodified	_NDLLRRLTVD_					0	0	0			REV__nc|ENSG00000204634|O95759-2|TBC1D8	REV__nc|ENSG00000204634|O95759-2|TBC1D8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5646667480469	3	405.566571	1213.67788	-1.5858	-0.00064316	-3.0129	-0.0012219	-4.5987	-0.0018651	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.86742	1	5322	5322		27.644	0.89421	1	181560	+		37412	23512	24900	24912	42574	42574					0.07959275829057333
NDLLRRLTVD	10	Unmodified	_NDLLRRLTVD_					0	0	0			REV__nc|ENSG00000204634|O95759-2|TBC1D8	REV__nc|ENSG00000204634|O95759-2|TBC1D8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5648498535156	3	405.566571	1213.67788	-1.5366	-0.00062318	-2.7212	-0.0011036	-4.2578	-0.0017268	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.86446	1	5565	5565		30.569	1.9921	1	187890	+		37413	23512	24900	24912	42575	42575					0.07959275829057333
NDLTKITKK	9	Unmodified	_NDLTKITKK_					0	0	0			REV__nc|ENSG00000140403|Q8WW22-3|DNAJA4	REV__nc|ENSG00000140403|Q8WW22-3|DNAJA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8204345703125	2	530.821681	1059.62881	0.37543	0.00019929	-1.3756	-0.00073019	-1.0002	-0.0005309	530.8207758612427	79.518	0.93618	79.934	79.317	80.253	0.41621					53	21	3	0	0	0	0.78983	1	9093	9093		27.882	0	1	1028200	+		37414	29890	24901	24913	42576	42576					0.10137987540110771
NDLVLMQCCE	10	Unmodified	_NDLVLMQCCE_					0	0	0			REV__ENST00000491040.5_1_20:33934876-33981976:-|nuORF	REV__ENST00000491040.5_1_20:33934876-33981976:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.2451171875	2	584.245777	1166.477	-0.91097	-0.00053223	-2.2309	-0.0013034	-3.1418	-0.0018356	584.2443398968256	59.966	1.1406	60.519	60.119	61.26	0.55323					79	30	3	0	0	0	0.73395	1	6394	6394		42.864	4.0581	1	4658100	+		37415	27647	24902	24914	42577	42577					-0.09957820865724898
NDMEDDSMD	9	Unmodified	_NDMEDDSMD_					0	0	0		ENSG00000005194|ENST00000394391|CIAPIN1;nc|ENSG00000005194|Q6FI81-3|CIAPIN1;ENST00000560974.3_1_15:69126737-69127085:+|nuORF	ENSG00000005194|ENST00000394391|CIAPIN1;ENST00000560974.3_1_15:69126737-69127085:+|nuORF	ENST00000560974.3_1_15:69126737-69127085:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1688842773438	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.821	1	18.865	18.365	19.365	0.043747								0	0	0	0.34348	1	366	366		16.473	5.6076	1				37416	677;13823	24903	24915	42578	42578					-0.21549077329086685
NDMIYACVPL	10	Carbamidomethyl (C),Oxidation (M)	_NDM(Oxidation (M))IYAC(Carbamidomethyl (C))VPL_	NDMIYAC(1)VPL	NDM(1)IYACVPL	NDMIYAC(44)VPL	NDM(44)IYACVPL	0	1	1		nc|ENSG00000053770|Q9H0R1-2|AP5M1;ENST00000554931.1_1_14:57736032-57741739:+|nuORF;ENSG00000053770|ENST00000261558|AP5M1	nc|ENSG00000053770|Q9H0R1-2|AP5M1	nc|ENSG00000053770|Q9H0R1-2|AP5M1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.5185852050781	3	404.519353	1210.53623	1.5705	0.0006353	-4.3146	-0.0017453	-2.7441	-0.00111	404.5175016504573	24.842	0.98841	24.514	24.116	25.104	-0.32825					51	21	4	0	0	0	0.71918	1	1208	1208		43.651	10.9	1	979180			37417	1011	24904	24916	42579	42579	12	16			-0.06061601579881426
NDNRDPLSSY	10	Unmodified	_NDNRDPLSSY_					0	0	0		ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-2|TAS1R1;nc|ENSG00000173662|Q7RTX1-4|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-4|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.7694702148438	2	590.765091	1179.51563	-0.050007	-2.9542E-05	3.5313	0.0020861	3.4813	0.0020566	590.7669689449548	53.54	0.46074	53.515	53.272	53.732	-0.02475					26	10	3	0	0	0	0.67571	1	4807	4807		45.972	1.5951	1	174010			37418	6878;15103	24905	24917	42580	42580					-0.06694732643700263
NDNSELPTAK	10	Unmodified	_NDNSELPTAK_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7;ENST00000569448.1_1_16:8993400-8995074:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.762939453125	2	544.76456	1087.51457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.248	1	29.229	28.729	29.729	-0.019407								0	0	0	0.45132	1	1458	1458		29.17	0	1				37419	7862	24906	24918	42581	42581					-0.025689470126280867
NDPDDHDE	8	Unmodified	_NDPDDHDE_					0	0	0			REV__ENSG00000127083|ENST00000375550|OMD	REV__ENSG00000127083|ENST00000375550|OMD	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.6641845703125	2	478.665043	955.315533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.195	1	73.324	72.824	73.824	0.1292								0	0	0	0.29497	1	6733	6733		34.173	5.023	1		+		37420	18721	24907	24919	42582	42582					-0.16391207311323797
NDPGPDPI	8	Unmodified	_NDPGPDPI_					0	0	0		ENST00000519647.5_1_8:30244827-30332368:+|nuORF	ENST00000519647.5_1_8:30244827-30332368:+|nuORF	ENST00000519647.5_1_8:30244827-30332368:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76629638671875	2	412.692875	823.371197	-1.3515	-0.00055774	-0.39245	-0.00016196	-1.7439	-0.0007197	412.6927097133095	40.411	0.45211	40.367	40.095	40.547	-0.043694					12	10	2	0	0	0	0.4196	1	2963	2963		45.952	0	1	52832			37421	13140	24908	24920	42583	42583					-0.04755329333033842
NDPGWLQEV	9	Unmodified	_NDPGWLQEV_					0	0	0		ENST00000262410.9_2_17:44102558-44102828:+|nuORF	ENST00000262410.9_2_17:44102558-44102828:+|nuORF	ENST00000262410.9_2_17:44102558-44102828:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.2526245117188	2	529.251089	1056.48762	-0.18991	-0.00010051	3.6082	0.0019096	3.4183	0.0018091	529.252855452323	35.702	0.58549	35.646	35.34	35.925	-0.055904					25	12	3	0	0	0	0.58668	1	2336	2336		47.657	1.6851	1	103810			37422	9437	24909	24921	42584	42584					-0.038360108331289666
NDPGWLQEV	9	Unmodified	_NDPGWLQEV_					0	0	0		ENST00000262410.9_2_17:44102558-44102828:+|nuORF	ENST00000262410.9_2_17:44102558-44102828:+|nuORF	ENST00000262410.9_2_17:44102558-44102828:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	529.251089	1056.48762	-0.54337	-0.00028758	3.6557	0.0019348	3.1124	0.0016472	529.2530650876131	35.581	0.68679	35.591	35.34	36.027	0.0092773	-0.0058897	0.00013435	NaN	47.657	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99686			37423	9437	24909	24921							-0.038360108331289666
NDPLKILAK	9	Unmodified	_NDPLKILAK_					0	0	0			REV__nc|ENSG00000144369|Q6P995-2|FAM171B	REV__nc|ENSG00000144369|Q6P995-2|FAM171B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3153076171875	2	506.313492	1010.61243	-0.76362	-0.00038663	1.2972	0.00065677	0.53354	0.00027014	506.31466932860326	64.656	1.1015	64.694	64.186	65.287	0.037849					66	38	3	0	0	0	0.78983	1	5680	5680		27.882	0	1	206490	+		37424	19885	24910	24922	42585	42585					0.1075490637402936
NDPLKILAK	9	Unmodified	_NDPLKILAK_					0	0	0			REV__nc|ENSG00000144369|Q6P995-2|FAM171B	REV__nc|ENSG00000144369|Q6P995-2|FAM171B	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	506.313492	1010.61243	-0.76362	-0.00038663	1.2972	0.00065677	0.53354	0.00027014	506.31466932860326	64.656	1.1015	64.694	64.186	65.287	0.037849	0	0	NaN	27.882	66	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206490	+		37425	19885	24910	24922							0.1075490637402936
NDPPDPVQS	9	Unmodified	_NDPPDPVQS_					0	0	0			REV__ENST00000496105.1_1_3:113169108-113212968:-|nuORF	REV__ENST00000496105.1_1_3:113169108-113212968:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7176208496094	2	484.719621	967.42469	1.6171	0.00078385	-4.4441	-0.0021542	-2.827	-0.0013703	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.48102	1	11809	11809		52.937	5.2794	1	7541600	+		37426	20942	24911	24923	42586	42586					-0.060325766211803966
NDPPDPVQS	9	Unmodified	_NDPPDPVQS_					0	0	0			REV__ENST00000496105.1_1_3:113169108-113212968:-|nuORF	REV__ENST00000496105.1_1_3:113169108-113212968:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71746826171875	2	484.719621	967.42469	1.0671	0.00051723	-3.9124	-0.0018964	-2.8453	-0.0013792	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.71772	1	11852	11852		39.253	4.1008	1	7522200	+		37427	20942	24911	24923	42587	42587					-0.060325766211803966
NDPPGSEH	8	Unmodified	_NDPPGSEH_					0	0	0		ENST00000399813.1_1_22:18043396-18070735:+|nuORF	ENST00000399813.1_1_22:18043396-18070735:+|nuORF	ENST00000399813.1_1_22:18043396-18070735:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.30291748046875	2	426.677756	851.34096	0.46034	0.00019642	1.44	0.00061443	1.9004	0.00081085	426.6792661899284	70.418	0.081985	70.547	70.514	70.596	0.12964					5	3	2	0	0	0	0.4196	1	6403	6403		50.025	29.078	1	26441			37428	11212	24912	24924	42588	42588					-0.09065687998236172
NDPSWDLHTI	10	Unmodified	_NDPSWDLHTI_					0	0	0			REV__ENSG00000143924|ENST00000318522|EML4	REV__ENSG00000143924|ENST00000318522|EML4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.2787475585938	2	599.280377	1196.5462	0.35213	0.00021102	2.0489	0.0012279	2.401	0.0014389	599.2814597176626	41.781	0.996	41.736	41.358	42.354	-0.045467					57	26	3	0	0	0	0.86471	1	2816	2816		30.318	0	1	2305700	+		37429	19856	24913	24925	42589	42589					-0.044209542586713724
NDQLIPFID	9	Unmodified	_NDQLIPFID_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.2529296875	2	537.776939	1073.53933	-2.2614	-0.0012161	2.5703	0.0013822	0.3089	0.00016612	537.7782784402208	43.215	1.2516	43.989	43.498	44.75	0.7738					41	30	2	0	0	0	0.20789	1	3957	3957		49.536	0	1	764550			37430	8353	24914	24926	42590	42590					0.005497328607589225
NDQRQKIKA	9	Unmodified	_NDQRQKIKA_					0	0	0		ENSG00000138279|ENST00000372921|ANXA7;nc|ENSG00000138279|P20073|ANXA7	ENSG00000138279|ENST00000372921|ANXA7	ENSG00000138279|ENST00000372921|ANXA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.811279296875	2	550.812179	1099.60981	-0.50482	-0.00027806	-0.73845	-0.00040675	-1.2433	-0.00068481	550.8117175069709	61.086	0.80542	61.117	60.898	61.703	0.0312					50	40	2	0	0	0	0.71772	1	5709	5709		39.253	2.0937	1	1025000			37431	4285	24915	24927	42591	42591					0.06398450969095393
NDRDPLLHLTI	11	Unmodified	_NDRDPLLHLTI_					0	0	0			REV__ENSG00000143315|ENST00000368090|PIGM	REV__ENSG00000143315|ENST00000368090|PIGM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7104187011719	3	436.241976	1305.7041	-1.1746	-0.00051243	0.24296	0.00010599	-0.93168	-0.00040644	436.24054396366427	30.887	0.13319	30.967	30.856	30.989	0.079834					4	2	2	0	0	0	0.17273	1	2051	2051		17.833	3.1395	1	14593	+		37432	19789	24916	24928	42592	42592					0.06347545000585342
NDRKKFAG	8	Unmodified	_NDRKKFAG_					0	0	0			REV__nc|ENSG00000083544|Q9H7E2-2|TDRD3	REV__nc|ENSG00000083544|Q9H7E2-2|TDRD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.2536926269531	2	468.256508	934.498464	-1.1861	-0.00055538	-2.7398	-0.0012829	-3.9258	-0.0018383	468.2551087994404	82.125	3.0486	82.125	81.258	84.307	0					145	81	2	0	0	0	0.87064	1	7742	7742		29.15	0.89528	1	128510	+		37433	15580	24917	24929	42593	42593					0.0285943633180068
NDSGLTGSLKE	11	Unmodified	_NDSGLTGSLKE_					0	0	0			REV__ENSG00000184995|ENST00000448696|IFNE	REV__ENSG00000184995|ENST00000448696|IFNE	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.7770385742188	2	560.777667	1119.54078	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.78	1	31.774	31.274	32.274	-0.0061455								0	0	0	0.56276	1	1760	1760		27.047	0.3544	1		+		37434	22722	24918	24930	42594	42594					-0.014206778411335108
NDSIIHDVVE	10	Unmodified	_NDSIIHDVVE_					0	0	0		ENST00000504674.1_1_5:39719286-39719799:-|nuORF;nc|ENSG00000102786|Q9UL03-3|INTS6;ENSG00000102786|ENST00000311234|INTS6	ENST00000504674.1_1_5:39719286-39719799:-|nuORF	ENST00000504674.1_1_5:39719286-39719799:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.777587890625	2	570.78021	1139.54587	-0.18434	-0.00010522	0.21517	0.00012281	0.030825	1.7594E-05	570.7802323989869	24.979	0.85899	24.938	24.556	25.415	-0.041168					44	21	3	0	0	0	0.80179	1	1045	1045		39.253	0	1	106130			37435	12908	24919	24931	42595	42595					-0.0183237397850462
NDSIKFLRKRF	11	Unmodified	_NDSIKFLRKRF_					0	0	0			REV__ENSG00000162669|ENST00000370425|HFM1	REV__ENSG00000162669|ENST00000370425|HFM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.27801513671875	3	475.277132	1422.80957	-0.65142	-0.0003096	3.3168	0.0015764	2.6654	0.0012668	475.2786104903565	58.659	1.4926	59.051	58.482	59.974	0.39209					112	35	5	0	0	0	0.75779	1	6169	6169		20.315	4.3944	1	2262000	+		37436	20833	24920	24932	42596	42596					0.11507505916824812
NDSKITVL	8	Unmodified	_NDSKITVL_					0	0	0		nc|ENSG00000125755|Q92797-2|SYMPK;ENSG00000125755|ENST00000245934|SYMPK	nc|ENSG00000125755|Q92797-2|SYMPK	nc|ENSG00000125755|Q92797-2|SYMPK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	444.732177734375	2	445.2531	888.491647	0.05955	2.6515E-05	2.3322	0.0010384	2.3918	0.0010649	445.254175113797	34.437	1.7035	34.647	33.735	35.439	0.21002					58	41	2	0	0	0	0.4196	1	2509	2509		51.335	1.8939	1	1588100			37437	3413	24921	24933	42597	42597					0.04294078660552714
NDSSGIRLY	9	Unmodified	_NDSSGIRLY_					0	0	0		ENSG00000123454|ENST00000393056|DBH	ENSG00000123454|ENST00000393056|DBH	ENSG00000123454|ENST00000393056|DBH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.7564086914062	2	512.756538	1023.49852	0.26758	0.00013721	0.14591	7.4815E-05	0.41349	0.00021202	512.7561857800653	24.185	0.53717	24.142	23.852	24.389	-0.043221					19	12	2	0	0	0	0.58151	1	857	857		47.916	7.343	1	28779			37438	3274	24922	24934	42598	42598					-0.012286084588708945
NDSSGIRLY	9	Unmodified	_NDSSGIRLY_					0	0	0		ENSG00000123454|ENST00000393056|DBH	ENSG00000123454|ENST00000393056|DBH	ENSG00000123454|ENST00000393056|DBH	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	512.756538	1023.49852	0.7451	0.00038206	-0.35988	-0.00018453	0.38522	0.00019752	512.7560610887779	23.92	0.3848	23.975	23.703	24.088	0.055487	-0.083542	-0.00032042	NaN	47.916	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29195			37439	3274	24922	24934							-0.012286084588708945
NDTQDFDMKP	10	Unmodified	_NDTQDFDMKP_					0	0	0			REV__ENSG00000168306|ENST00000302819|ACOX2	REV__ENSG00000168306|ENST00000302819|ACOX2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.1738891601562	2	605.755878	1209.4972	0.85166	0.0005159	2.2003	0.0013328	3.0519	0.0018487	605.7570618740114	53.808	1.125	54.222	53.622	54.747	0.4139					54	26	3	0	0	0	0.37624	1	5508	5508		16.717	0	1	1232700	+		37440	21477	24923	24935	42599	42599					-0.09916610609934651
NDTRKPLPL	9	Unmodified	_NDTRKPLPL_					0	0	0			REV__ENST00000374021.1_2_6:34574510-34574555:-|nuORF	REV__ENST00000374021.1_2_6:34574510-34574555:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3099365234375	2	527.306198	1052.59784	0.22557	0.00011895	-1.2439	-0.00065592	-1.0183	-0.00053697	527.3056758217631	65.842	1.4123	66.394	65.981	67.393	0.5526					56	41	2	0	0	0	0.78058	1	7170	7170		30.504	0.18592	1	933280	+		37441	25778	24924	24936	42600	42600					0.07364834225904815
NDTTASGF	8	Unmodified	_NDTTASGF_					0	0	0			REV__ENSG00000101146|ENST00000395841|RAE1	REV__ENSG00000101146|ENST00000395841|RAE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78509521484375	2	406.674682	811.334812	1.4194	0.00057723	-2.7503	-0.0011185	-1.3309	-0.00054124	406.67326664687874	35.538	0.36432	35.547	35.295	35.659	0.0092773					14	7	3	0	0	0	0.4196	1	2235	2235		19.36	0	1	22067	+		37442	17244	24925	24937	42601	42601					-0.07840206229741398
NDTTLAPEY	9	Unmodified	_NDTTLAPEY_					0	0	0		nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;ENSG00000080493|ENST00000264485|SLC4A4;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4;nc|ENSG00000080493|Q9Y6R1-4|SLC4A4	nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2344360351562	2	512.235104	1022.45566	-1.0242	-0.00052464	0.80939	0.0004146	-0.21483	-0.00011004	512.2354118058422	58.286	0.91768	58.32	57.951	58.869	0.033905					83	29	4	0	0	0	0.62081	1	5363	5363		45.952	1.8352	1	1356000			37443	1441	24926	24938	42602	42602					-0.05467423306959063
NDVYVAIAQP	10	Unmodified	_NDVYVAIAQP_					0	0	0		ENSG00000153012|ENST00000382114|LGI2	ENSG00000153012|ENST00000382114|LGI2	ENSG00000153012|ENST00000382114|LGI2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.2962646484375	2	545.282389	1088.55022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.614	1	57.72	57.22	58.22	0.1055								0	0	0	0.45132	1	4885	4885		36.447	0.82846	1				37444	5208	24927	24939	42603	42603					0.009491352350551097
NEAFTYVLRRY	11	Unmodified	_NEAFTYVLRRY_					0	0	0			REV__ENST00000435765.5_1_7:102985538-102988027:+|nuORF	REV__ENST00000435765.5_1_7:102985538-102988027:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.239990234375	3	477.917493	1430.73065	-1.1413	-0.00054544	0.83922	0.00040108	-0.30207	-0.00014436	477.9178685364961	53.247	0.87195	53.861	53.449	54.321	0.61436					45	20	3	0	0	0	0.17648	1	5436	5436		21.032	12.625	1	451440	+		37445	26683	24928	24940	42604	42604					0.032512338918877504
NEAILLALY	9	Unmodified	_NEAILLALY_					0	0	0		ENSG00000120029|ENST00000370033|ARMH3	ENSG00000120029|ENST00000370033|ARMH3	ENSG00000120029|ENST00000370033|ARMH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2910461425781	2	510.292225	1018.5699	0.28458	0.00014522	-0.21226	-0.00010831	0.072316	3.6902E-05	510.2919738028183	53.674	0.62811	54.259	54.039	54.667	0.58474					25	14	2	0	0	0	0.43338	1	5438	5438		55.504	0	1	573270			37446	3109	24929	24941	42605	42605					0.06135511245804537
NEALARVEV	9	Unmodified	_NEALARVEV_					0	0	0		ENSG00000180914|ENST00000316793|OXTR	ENSG00000180914|ENST00000316793|OXTR	ENSG00000180914|ENST00000316793|OXTR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.7754821777344	2	500.774731	999.534909	-0.57961	-0.00029025	0.52797	0.0002644	-0.051635	-2.5858E-05	500.77496345049894	50.6	0.57563	50.629	50.343	50.919	0.029629					31	17	2	0	0	0	0.69624	1	3977	3977		40.778	1.5253	1	273720			37447	7358	24930	24942	42606	42606					0.03512268437862076
NEALFHLV	8	Unmodified	_NEALFHLV_					0	0	0			REV__nc|ENSG00000065923|Q96T83|SLC9A7	REV__nc|ENSG00000065923|Q96T83|SLC9A7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.8479919433594	2	471.75581	941.497067	-0.20496	-9.6693E-05	-2.4803	-0.0011701	-2.6853	-0.0012668	471.7546456258959	49.309	0.20558	49.769	49.707	49.912	0.45983					6	4	2	0	0	0	0.4196	1	4791	4791		35.201	19.564	1	70881	+		37448	16512	24931	24943	42607	42607					0.02397802243035585
NEAPLKKKG	9	Unmodified	_NEAPLKKKG_					0	0	0			REV__nc|ENSG00000065534|Q15746-4|MYLK	REV__nc|ENSG00000065534|Q15746-4|MYLK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.79541015625	2	492.795466	983.57638	-0.48872	-0.00024084	0.85267	0.00042019	0.36395	0.00017935	492.7954928970322	26.494	0.72065	26.318	25.983	26.703	-0.17559					26	15	2	0	0	0	0.73802	1	1448	1448		37.812	3.639	1	121210	+		37449	16504	24932	24944	42608	42608					0.08393449197183145
NEAPLKKKG	9	Unmodified	_NEAPLKKKG_					0	0	0			REV__nc|ENSG00000065534|Q15746-4|MYLK	REV__nc|ENSG00000065534|Q15746-4|MYLK	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	492.795466	983.57638	-0.48872	-0.00024084	0.85267	0.00042019	0.36395	0.00017935	492.7954928970322	26.494	0.72065	26.318	25.983	26.703	-0.17559	0.054632	0.0011392	NaN	37.812	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121210	+		37450	16504	24932	24944							0.08393449197183145
NEAPLKKKG	9	Unmodified	_NEAPLKKKG_					0	0	0			REV__nc|ENSG00000065534|Q15746-4|MYLK	REV__nc|ENSG00000065534|Q15746-4|MYLK	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	492.795466	983.57638	1.9387	0.00095539	-1.5621	-0.0007698	0.3766	0.00018559	492.7943205252042	26.55	0.71724	26.209	25.831	26.549	-0.34035	-0.054632	-0.0012408	NaN	37.812	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130350	+		37451	16504	24932	24944							0.08393449197183145
NEAVLLEL	8	Unmodified	_NEAVLLEL_					0	0	0			REV__nc|ENSG00000140299|Q12982-2|BNIP2	REV__nc|ENSG00000140299|Q12982-2|BNIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7546081542969	2	450.755475	899.496398	-0.14159	-6.3823E-05	-2.8357	-0.0012782	-2.9773	-0.001342	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.87922	1	7676	7676		31.955	1.6371	1	109620	+		37452	29888	24933	24945	42609	42609					0.04262962803340997
NECSQGDKKV	10	Unmodified	_NECSQGDKKV_					0	0	0		ENSG00000119778|ENST00000238789|ATAD2B;nc|ENSG00000119778|Q9ULI0-2|ATAD2B;ENST00000366438.3_1_2:24079281-24090752:-|nuORF	ENSG00000119778|ENST00000238789|ATAD2B	ENSG00000119778|ENST00000238789|ATAD2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.258544921875	2	554.258588	1106.50262	-0.20418	-0.00011317	0.87987	0.00048768	0.67569	0.00037451	554.2589451632552	71.042	2.142	71.59	71.166	73.308	0.54756					123	51	4	0	0	0	0.14384	2	7915	7895;7915		95.815	18.498	1	2743300			37453	3096	24934	24946	42610;42611	42611					-0.046368870274591245
NECVAHEVSAG	11	Unmodified	_NECVAHEVSAG_					0	0	0			REV__ENSG00000140470|ENST00000268070|ADAMTS17	REV__ENSG00000140470|ENST00000268070|ADAMTS17	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.29931640625	2	558.242938	1114.47132	-0.61337	-0.00034241	-3.2855	-0.0018341	-3.8988	-0.0021765	558.2408200330063	42.667	0.38173	42.638	42.497	42.879	-0.029461					14	9	2	0	0	0	0.17376	1	3203	3203		32.751	6.0576	1	66982	+		37454	19621	24935	24947	42612	42612					-0.08133460061549158
NEDLKLRK	8	Unmodified	_NEDLKLRK_					0	0	0		ENSG00000196553|ENST00000636229|CCDC196	ENSG00000196553|ENST00000636229|CCDC196	ENSG00000196553|ENST00000636229|CCDC196	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2984619140625	2	508.298373	1014.58219	-0.95406	-0.00048495	1.6278	0.00082741	0.67374	0.00034246	508.2985875373154	30.098	0.79341	30.126	29.833	30.627	0.028618					61	17	6	0	0	0	0.88217	1	1970	1970		58.23	7.0372	1	1055000			37455	8073	24936	24948	42613	42613					0.07548547708859132
NEDNSVVSL	9	Unmodified	_NEDNSVVSL_					0	0	0		ENST00000493886.5_1_9:35062192-35072350:-|nuORF;ENSG00000165280|ENST00000358901|VCP	ENST00000493886.5_1_9:35062192-35072350:-|nuORF	ENST00000493886.5_1_9:35062192-35072350:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7328186035156	2	488.732729	975.450904	-0.043524	-2.1272E-05	0.053186	2.5994E-05	0.0096616	4.7219E-06	488.7325875921595	55.647	0.61892	56.048	55.74	56.359	0.40102					36	14	3	0	0	0	0.15959	1	5700	5700		82.241	12.613	1	1402500			37456	6066	24937	24949	42614	42614					-0.03780307449699194
NEDSPVVPLML	11	Unmodified	_NEDSPVVPLML_					0	0	0		ENSG00000100596|ENST00000216484|SPTLC2	ENSG00000100596|ENST00000216484|SPTLC2	ENSG00000100596|ENST00000216484|SPTLC2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	607.3116455078125	2	607.310289	1212.60602	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.645	1	26.754	26.254	27.254	0.10901								0	0	0	0.56276	1	1026	1026		27.047	0.25122	1				37457	1853	24938	24950	42615	42615					0.008226003603567733
NEEFRLFLSTR	11	Unmodified	_NEEFRLFLSTR_					0	0	0		ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.25238037109375	3	471.249131	1410.72556	-0.24956	-0.00011761	2.9827	0.0014056	2.7331	0.001288	471.2506526650545	31.498	0.55984	31.447	31.171	31.731	-0.051033					21	12	2	0	0	0	0.76942	1	1781	1781		17.722	0.55478	1	42881			37458	7849	24939	24951	42616	42616					0.036629300292588596
NEEHIHMAQ	9	Unmodified	_NEEHIHMAQ_					0	0	0		ENSG00000123066|ENST00000281928|MED13L	ENSG00000123066|ENST00000281928|MED13L	ENSG00000123066|ENST00000281928|MED13L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7864990234375	2	554.745647	1107.47674	0.53597	0.00029733	2.6564	0.0014736	3.1924	0.001771	554.7456134672605	51.434	0.33437	52.151	51.986	52.321	0.71693					10	7	2	0	0	0	0.20789	1	5137	5137		29.17	0	1	86801			37459	3258	24940	24952	42617	42617					-0.07269736479065614
NEEILRNILG	10	Unmodified	_NEEILRNILG_					0	0	0			REV__ENSG00000051341|ENST00000264233|POLQ	REV__ENSG00000051341|ENST00000264233|POLQ	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	586.6437377929688	2	585.827495	1169.64044	0.69509	0.0004072	2.8597	0.0016753	3.5548	0.0020825	585.8288866915458	59.028	0.93266	59.115	58.86	59.793	0.087002					48	33	2	0	0	0	0.37624	1	5067	5067		24.519	0	1	109190	+		37460	16382	24941	24953	42618	42618					0.062401845634894926
NEEIVLFQQ	9	Unmodified	_NEEIVLFQQ_					0	0	0			REV__ENSG00000001626|ENST00000003084|CFTR	REV__ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.2891845703125	2	560.287671	1118.56079	-1.1272	-0.00063153	1.2733	0.00071341	0.14613	8.1875E-05	560.2882669932782	78.496	1.0533	78.552	78.241	79.294	0.056114					77	30	4	0	0	0	0.77244	1	7654	7654		32.812	5.7651	1	910100	+		37461	16042	24942	24954	42619	42619					0.0062511788946721936
NEEKVMPDL	9	Unmodified	_NEEKVMPDL_					0	0	0			REV__ENST00000484913.5_1_7:92116773-92148321:-|nuORF	REV__ENST00000484913.5_1_7:92116773-92148321:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.796142578125	2	537.760432	1073.50631	-1.1247	-0.00060482	2.446	0.0013154	1.3213	0.00071054	537.7615139700185	47.407	0.50803	47.878	47.65	48.158	0.47139					24	12	2	0	0	0	0.20789	1	4526	4526		44.377	27.012	1	987610	+		37462	27519	24943	24955	42620	42620					-0.027502172536060243
NEEPFVSCT	9	Unmodified	_NEEPFVSCT_					0	0	0			REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	REV__nc|ENSG00000179299|Q8NE18-2|NSUN7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7577514648438	2	513.215857	1024.41716	-1.5139	-0.00077696	0.77232	0.00039637	-0.74159	-0.0003806	513.2160830625958	42.872	0.33064	43.57	43.381	43.711	0.69754					12	7	2	0	0	0	0.20789	1	3833	3833		23.042	0	1	114800	+		37463	22329	24944	24956	42621	42621					-0.0940705221311191
NEFIITQH	8	Unmodified	_NEFIITQH_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1;nc|ENSG00000106278|P23471-3|PTPRZ1;nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF	nc|ENSG00000106278|P23471-2|PTPRZ1;nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2561950683594	2	501.256174	1000.49779	-1.5098	-0.00075678	0.9758	0.00048912	-0.53396	-0.00026765	501.25649871824	48.298	0.75492	48.298	47.982	48.737	0					44	18	3	0	0	0	0.37624	1	3745	3745		96.19	33.212	1	544020			37464	2287;4728	24945	24957	42622	42622					-0.0024340310790194053
NEFPEPIKL	9	Unmodified	_NEFPEPIKL_					0	0	0		ENSG00000075785|ENST00000265062|RAB7A	ENSG00000075785|ENST00000265062|RAB7A	ENSG00000075785|ENST00000265062|RAB7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.794677734375	2	543.795132	1085.57571	-0.26445	-0.00014381	0.10444	5.6796E-05	-0.16001	-8.7013E-05	543.7951376382376	66.267	1.4679	66.653	66.24	67.708	0.38582					108	41	4	0	0	0	7.6936E-65	11	7216	7184;7195;7205;7216;7233;7256;7266;7275;7284;7296;7313		214.23	66.188	1	9436600			37465	1343	24946	24958	42623;42624;42625;42626;42627;42628;42629;42630;42631;42632;42633	42626					0.036346097574551095
NEFPEPIKL	9	Unmodified	_NEFPEPIKL_					0	0	0		ENSG00000075785|ENST00000265062|RAB7A	ENSG00000075785|ENST00000265062|RAB7A	ENSG00000075785|ENST00000265062|RAB7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.7950439453125	2	543.795132	1085.57571	-0.28693	-0.00015603	0.22669	0.00012327	-0.060242	-3.2759E-05	543.795212022099	66.175	1.6362	66.728	66.268	67.904	0.55228					125	47	5	0	0	0	9.318300000000001E-29	9	7233	7191;7209;7219;7233;7245;7263;7283;7294;7310		185.72	62.129	1	9333700			37466	1343	24946	24958	42634;42635;42636;42637;42638;42639;42640;42641;42642	42637					0.036346097574551095
NEFRRRLEHKE	11	Unmodified	_NEFRRRLEHKE_					0	0	0			REV__nc|ENSG00000135127|Q6ZP65|BICDL1	REV__nc|ENSG00000135127|Q6ZP65|BICDL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.7333068847656	3	505.270929	1512.79096	-0.16367	-8.2697E-05	1.004	0.00050727	0.84029	0.00042457	505.2713294692846	44.969	0.45199	45.814	45.585	46.037	0.84437					27	10	4	0	0	0	0.18034	1	4202	4202		16.53	4.5975	1	776550	+		37467	19195	24947	24959	42643	42643					0.05507344274974457
NEGFPGAITL	10	Unmodified	_NEGFPGAITL_					0	0	0		ENST00000591765.1_1_17:40832514-40834376:-|nuORF	ENST00000591765.1_1_17:40832514-40834376:-|nuORF	ENST00000591765.1_1_17:40832514-40834376:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.7628479003906	2	509.763832	1017.51311	0.26906	0.00013716	-1.738	-0.00088598	-1.469	-0.00074882	509.7630688475473	44.759	0.65843	44.736	44.393	45.052	-0.023079					30	14	3	0	0	0	0.8545	1	3519	3519		36.447	2.2742	1	262680			37468	14280	24948	24960	42644	42644					0.0050546368928507945
NEGHNVYVQ	9	Unmodified	_NEGHNVYVQ_					0	0	0			REV__nc|ENSG00000104973|Q71SY5-6|MED25	REV__nc|ENSG00000104973|Q71SY5-6|MED25	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.3848876953125	2	530.246338	1058.47812	-0.13471	-7.1427E-05	0.12564	6.662E-05	-0.0090667	-4.8076E-06	530.2461943791166	28.258	0.52817	28.161	27.929	28.458	-0.096947					26	12	3	0	0	0	0.20789	1	1696	1696		34.173	0	1	223770	+		37469	17496	24949	24961	42645	42645					-0.04877779118669423
NEGIRRNSL	9	Unmodified	_NEGIRRNSL_					0	0	0			REV__ENSG00000128915|ENST00000261520|ICE2	REV__ENSG00000128915|ENST00000261520|ICE2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.789306640625	2	529.788704	1057.56285	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.262	1	60.653	60.153	61.153	0.39077								0	0	0	0.33576	1	6386	6386		45.972	1.5951	1		+		37470	18799	24950	24962	42646	42646					0.03637591417941621
NEGLKKKQ	8	Unmodified	_NEGLKKKQ_					0	0	0		nc|ENSG00000100503|Q8N4C6-6|NIN;nc|ENSG00000100503|Q8N4C6-11|NIN;nc|ENSG00000100503|Q8N4C6-4|NIN;nc|ENSG00000100503|Q8N4C6-9|NIN;nc|ENSG00000100503|Q8N4C6-2|NIN;nc|ENSG00000100503|Q8N4C6|NIN;nc|ENSG00000100503|Q8N4C6-5|NIN;nc|ENSG00000100503|Q8N4C6-10|NIN;ENSG00000100503|ENST00000530997|NIN	nc|ENSG00000100503|Q8N4C6-6|NIN	nc|ENSG00000100503|Q8N4C6-6|NIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7795104980469	2	472.779816	943.545079	0.16923	8.0011E-05	-0.20064	-9.486E-05	-0.031408	-1.4849E-05	472.7796320364736	35.339	0.65096	35.284	35.071	35.722	-0.055149					39	21	3	0	0	0	0.93293	1	1856	1856		51.335	0	1	166940			37471	1844	24951	24963	42647	42647					0.07104876163089102
NEGQRKPV	8	Unmodified	_NEGQRKPV_					0	0	0		nc|ENSG00000122068|Q96QD9-3|FYTTD1;nc|ENSG00000122068|Q96QD9-2|FYTTD1;ENSG00000122068|ENST00000241502|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2538757324219	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.89043	1	8273	8273		35.618	0	1	1449300			37472	3209	24952	24964	42648	42648					0.027191324691898444
NEGRLYRGY	9	Unmodified	_NEGRLYRGY_					0	0	0		ENST00000295087.12_1_2:152657041-152657143:-|nuORF	ENST00000295087.12_1_2:152657041-152657143:-|nuORF	ENST00000295087.12_1_2:152657041-152657143:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.3211059570312	2	564.283254	1126.55196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.967	1	55.93	55.43	56.43	-0.036827								0	0	0	0.33576	1	4713	4713		45.972	13.16	1				37473	9712	24953	24965	42649	42649					-0.00625810956330497
NEHARFQKAK	10	Unmodified	_NEHARFQKAK_					0	0	0		nc|ENSG00000084234|Q06481-6|APLP2;nc|ENSG00000084234|Q06481-5|APLP2;nc|ENSG00000084234|Q06481-4|APLP2;nc|ENSG00000084234|Q06481-2|APLP2;ENSG00000084234|ENST00000338167|APLP2;nc|ENSG00000084234|Q06481|APLP2	nc|ENSG00000084234|Q06481-6|APLP2	nc|ENSG00000084234|Q06481-6|APLP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	410.223388671875	3	410.223028	1227.64725	-1.9325	-0.00079277	2.3303	0.00095595	0.39779	0.00016318	410.2239350295133	23.509	0.59683	23.562	23.412	24.009	0.05291					49	27	2	0	0	0	0.86014	1	760	760		23.378	0	1	101820			37474	14791	24954	24966	42650	42650					0.04253542234710039
NEHLPWMIVL	10	Unmodified	_NEHLPWMIVL_					0	0	0		ENSG00000146072|ENST00000296861|TNFRSF21	ENSG00000146072|ENST00000296861|TNFRSF21	ENSG00000146072|ENST00000296861|TNFRSF21	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92230224609375	3	417.889998	1250.64816	-1.8946	-0.00079172	-0.35956	-0.00015026	-2.2541	-0.00094197	417.88907470174564	105.87	0.23677	105.94	105.76	106	0.073112					6	5	2	0	0	0	0.37624	1	11213	11213		12.957	0	1	61741			37475	4818	24955	24967	42651	42651					0.03286620559401854
NEHRRRTIKT	10	Unmodified	_NEHRRRTIKT_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2628479003906	3	437.584848	1309.73271	-1.2467	-0.00054555	-2.4235	-0.0010605	-3.6702	-0.001606	437.58366492227043	41.743	0.6934	41.705	41.409	42.103	-0.038223					30	16	3	0	0	0	0.37624	1	3182	3182		16.53	0	1	111900	+		37476	19496	24956	24968	42652	42652					0.09023707420351457
NEHRRRTIKT	10	Unmodified	_NEHRRRTIKT_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.262939453125	3	437.584848	1309.73271	0.26273	0.00011497	-4.2485	-0.0018591	-3.9857	-0.0017441	437.58314851658065	41.724	0.65685	41.728	41.461	42.118	0.003418					27	15	3	0	0	0	0.37624	1	3132	3132		11.932	0	1	120180	+		37477	19496	24956	24968	42653	42653					0.09023707420351457
NEIHCSFCETK	11	Unmodified	_NEIHCSFCETK_					0	0	0		ENSG00000170236|ENST00000532404|USP50;nc|ENSG00000170236|Q70EL3|USP50	ENSG00000170236|ENST00000532404|USP50	ENSG00000170236|ENST00000532404|USP50	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2633056640625	3	437.521645	1309.54311	-1.6001	-0.00070009	2.9882	0.0013074	1.3881	0.00060731	437.5219263627848	35.334	0.17232	35.369	35.236	35.408	0.035088					6	5	2	0	0	0	0.17424	1	1854	1854		18.332	0	1	16381			37478	6569	24957	24969	42654	42654					-0.09928288699347831
NEIIHPGCL	9	Unmodified	_NEIIHPGCL_					0	0	0		ENST00000538503.5_1_12:121882954-121987523:-|nuORF;nc|ENSG00000089094|Q8NHM5-4|KDM2B;nc|ENSG00000089094|Q8NHM5-2|KDM2B;nc|ENSG00000089094|Q8NHM5-3|KDM2B;ENSG00000089094|ENST00000377071|KDM2B	ENST00000538503.5_1_12:121882954-121987523:-|nuORF	ENST00000538503.5_1_12:121882954-121987523:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.2510986328125	2	498.252577	994.490601	-0.99209	-0.00049431	-3.1151	-0.0015521	-4.1072	-0.0020464	498.25142789231467	84.759	2.4523	84.759	83.586	86.038	0					132	57	3	0	0	0	0.76764	1	7999	7999		34.173	7.3764	1	112180			37479	1608	24958	24970	42655	42655					-0.006864589799761234
NEILFSEF	8	Unmodified	_NEILFSEF_					0	0	0		ENSG00000113272|ENST00000231198|THG1L	ENSG00000113272|ENST00000231198|THG1L	ENSG00000113272|ENST00000231198|THG1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.82635498046875	2	499.745108	997.475663	-0.072025	-3.5994E-05	3.2855	0.0016419	3.2135	0.0016059	499.7467280692381	68.276	1.7033	68.661	68.028	69.731	0.38482					79	40	4	0	0	0	0.4196	1	7430	7430		50.025	0	1	539910			37480	2710	24959	24971	42656	42656					-0.02317627576326231
NEILGSLRW	9	Unmodified	_NEILGSLRW_					0	0	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.8009643554688	2	544.298373	1086.58219	0.33802	0.00018398	2.4476	0.0013322	2.7856	0.0015162	544.8017593323574	73.955	0.2354	73.913	73.787	74.022	-0.042015					10	8	2	0	0	0	0.50922	1	7247	7247		51.528	5.5555	1	222690			37481	2636	24960	24972	42657	42657					0.042365477088424086
NEILILLV	8	Unmodified	_NEILILLV_					0	0	0		ENST00000557261.1_1_14:89816083-89817451:-|nuORF	ENST00000557261.1_1_14:89816083-89817451:-|nuORF	ENST00000557261.1_1_14:89816083-89817451:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8000183105469	2	463.799686	925.584819	-1.1872	-0.0005506	2.6442	0.0012264	1.4571	0.00067579	463.80074391702703	41.648	1.5471	41.608	41.079	42.626	-0.039845					90	38	3	0	0	0	0.83058	1	3172	3172		12.959	0	1	510860			37482	13768	24961	24973	42658	42658					0.11905003113815837
NEILILLV	8	Unmodified	_NEILILLV_					0	0	0		ENST00000557261.1_1_14:89816083-89817451:-|nuORF	ENST00000557261.1_1_14:89816083-89817451:-|nuORF	ENST00000557261.1_1_14:89816083-89817451:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.7996520996094	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.84191	1	3407	3407		11.511	0	1	1294000			37483	13768	24961	24973	42659	42659					0.11905003113815837
NEISERVVQ	9	Unmodified	_NEISERVVQ_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.314453125	2	537.28292	1072.55129	-0.19653	-0.00010559	-1.145	-0.00061517	-1.3415	-0.00072076	537.7857399298114	49.612	0.20242	50.072	49.952	50.155	0.45983					6	4	2	0	0	0	0.20789	1	4831	4831		36.447	0	1	234990			37484	3260	24962	24974	42660	42660					0.017913496039454913
NEIVPLHAE	9	Unmodified	_NEIVPLHAE_					0	0	0			REV__CON__P06868	REV__CON__P06868	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.29119873046875	2	511.269281	1020.52401	0.4211	0.0002153	-0.47189	-0.00024126	-0.050791	-2.5968E-05	511.2689035153498	52.639	0.41581	53.253	53.033	53.449	0.61436					21	9	3	0	0	0	0.20789	1	5313	5313		58.782	18.209	1	502430	+	+	37485	15980	24963	24975	42661	42661					0.0145686606357458
NEIVTLERL	9	Unmodified	_NEIVTLERL_					0	0	0		ENSG00000129245|ENST00000250113|FXR2;ENST00000576693.1_1_17:7506199-7507356:-|nuORF	ENSG00000129245|ENST00000250113|FXR2	ENSG00000129245|ENST00000250113|FXR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.8135375976562	2	543.811313	1085.60807	-1.5577	-0.00084712	1.6175	0.00087963	0.059772	3.2505E-05	543.8120778496202	58.532	0.7079	58.924	58.651	59.359	0.39209					33	16	3	0	0	0	0.030919	1	6136	6136		117.81	0	1	444070			37486	3579	24964	24976	42662	42662					0.06869397160471635
NEIVTLERL	9	Unmodified	_NEIVTLERL_					0	0	0		ENSG00000129245|ENST00000250113|FXR2;ENST00000576693.1_1_17:7506199-7507356:-|nuORF	ENSG00000129245|ENST00000250113|FXR2	ENSG00000129245|ENST00000250113|FXR2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	543.811313	1085.60807	-0.20764	-0.00011292	-0.012443	-6.7666E-06	-0.22009	-0.00011969	543.8113727162915	58.403	0.70275	58.956	58.64	59.343	0.55323	0.015748	-0.0008166	NaN	117.81	32	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	549500			37487	3579	24964	24976							0.06869397160471635
NEIVYFLP	8	Unmodified	_NEIVYFLP_					0	0	0		nc|ENSG00000162129|Q9H078-3|CLPB;ENSG00000162129|ENST00000538039|CLPB;nc|ENSG00000162129|Q9H078|CLPB;ENST00000538021.5_2_11:72004413-72018253:-|nuORF;nc|ENSG00000162129|Q9H078-5|CLPB;nc|ENSG00000162129|Q9H078-4|CLPB	nc|ENSG00000162129|Q9H078-3|CLPB	nc|ENSG00000162129|Q9H078-3|CLPB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7663879394531	2	497.765843	993.517133	-0.34601	-0.00017223	2.3596	0.0011745	2.0136	0.0010023	497.7661047678955	65.904	0.67049	66.29	66.028	66.698	0.38582					46	16	4	0	0	0	0.91005	1	7181	7181		42.474	8.9589	1	383930			37488	5670	24965	24977	42663	42663					0.020115531830015243
NEKDYPPG	8	Unmodified	_NEKDYPPG_					0	0	0		ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.214111328125	2	460.211432	918.408311	4.3602	0.0020066	2.1173	0.00097442	6.4776	0.002981	460.21235011332533	107.04	0.72292	107.19	106.81	107.53	0.14929					46	22	3	0	0	0	0.89962	1	13113	13113		38.806	1.647	1	1388300			37489	2240	24966	24978	42664	42664					-0.054156577872845446
NEKEKKPLL	9	Unmodified	_NEKEKKPLL_					0	0	0			REV__ENSG00000171811|ENST00000368586|CFAP46	REV__ENSG00000171811|ENST00000368586|CFAP46	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.82958984375	2	549.829506	1097.64446	-1.509	-0.0008297	1.0078	0.00055412	-0.50121	-0.00027558	549.829981948683	48.545	1.2936	49.015	48.546	49.84	0.46941					84	31	4	0	0	0	0.11055	1	4725	4725		90.37	15.327	1	6848200	+		37490	21770	24967	24979	42665	42665					0.0995427405719056
NEKFGASIQC	10	Unmodified	_NEKFGASIQC_					0	0	0		nc|ENSG00000077684|Q6IE81-3|JADE1;ENSG00000077684|ENST00000226319|JADE1;nc|ENSG00000077684|Q6IE81-2|JADE1	nc|ENSG00000077684|Q6IE81-3|JADE1	nc|ENSG00000077684|Q6IE81-3|JADE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.7548828125	2	548.758223	1095.50189	-1.2109	-0.00066447	-1.8196	-0.00099853	-3.0305	-0.001663	548.7570802240218	51.68	0.48607	51.68	51.46	51.946	0					24	12	3	0	0	0	0.8545	1	4201	4201		36.447	0.82846	1	87820			37491	1385	24968	24980	42666	42666					-0.042036816764948526
NEKIKVLL	8	Unmodified	_NEKIKVLL_					0	0	0		ENSG00000218819|ENST00000405799|TDRD15	ENSG00000218819|ENST00000405799|TDRD15	ENSG00000218819|ENST00000405799|TDRD15	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97369384765625	2	478.810585	955.606617	0.40259	0.00019276	-3.1566	-0.0015114	-2.754	-0.0013186	478.8103431604724	58.533	1.0136	58.644	58.456	59.469	0.11027					61	39	2	0	0	0	0.4196	1	5070	5070		16.473	0	1	143010			37492	8662	24969	24981	42667	42667					0.12703807862362737
NEKKNVKT	8	Unmodified	_NEKKNVKT_					0	0	0			REV__nc|ENSG00000122008|Q9UBT6-3|POLK	REV__nc|ENSG00000122008|Q9UBT6-3|POLK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.27947998046875	2	480.777274	959.539994	-0.93098	-0.00044759	0.45386	0.0002182	-0.47712	-0.00022939	480.77759516090873	26.525	0.61392	26.494	26.228	26.841	-0.030939					17	12	2	0	0	0	0.4196	1	1140	1140		31.53	9.5699	1	34366	+		37493	18476	24970	24982	42668	42668					0.058605723004689025
NEKLPVKPGKR	11	Unmodified	_NEKLPVKPGKR_					0	0	0			REV__ENST00000535664.5_1_12:65720686-65847531:+|nuORF	REV__ENST00000535664.5_1_12:65720686-65847531:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.59246826171875	3	422.594461	1264.76155	-0.12961	-5.4774E-05	-3.0685	-0.0012967	-3.1981	-0.0013515	422.59301325163335	54.438	1.5298	54.43	53.553	55.082	-0.0077057					142	48	4	0	0	0	0.73647	1	4770	4770		25.068	0.83596	1	1173800	+		37494	28393	24971	24983	42669	42669					0.13976431996798055
NEKLPVKPGKR	11	Unmodified	_NEKLPVKPGKR_					0	0	0			REV__ENST00000535664.5_1_12:65720686-65847531:+|nuORF	REV__ENST00000535664.5_1_12:65720686-65847531:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7513427734375	3	422.594461	1264.76155	-1.7729	-0.0007492	-2.3627	-0.00099846	-4.1355	-0.0017477	422.927793103791	76.29	0.28822	76.415	76.152	76.44	0.12486					10	8	2	0	0	0	0.17648	1	7132	7132		11.455	5.7558	1	30304	+		37495	28393	24971	24983	42670	42670					0.13976431996798055
NEKLPVKPGKR	11	Unmodified	_NEKLPVKPGKR_					0	0	0			REV__ENST00000535664.5_1_12:65720686-65847531:+|nuORF	REV__ENST00000535664.5_1_12:65720686-65847531:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5928649902344	3	422.594461	1264.76155	0.31839	0.00013455	-3.8415	-0.0016234	-3.5231	-0.0014888	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.75779	2	4509	4449;4509		20.315	1.0523	1	1249100	+		37496	28393	24971	24983	42671;42672	42672					0.13976431996798055
NEKLRKVAY	9	Unmodified	_NEKLRKVAY_					0	0	0			REV__ENST00000477274.1_1_X:153276255-153284091:-|nuORF	REV__ENST00000477274.1_1_X:153276255-153284091:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.8265991210938	2	560.827298	1119.64004	0.31128	0.00017458	-2.2307	-0.001251	-1.9194	-0.0010765	560.8258290332603	50.891	0.60448	50.923	50.638	51.243	0.032314					47	18	3	0	0	0	0.77244	1	4017	4017		32.812	3.6424	1	550950	+		37497	22655	24972	24984	42673	42673					0.08500809634256257
NEKMTSTPETL	11	Unmodified	_NEKMTSTPETL_					0	0	0		ENST00000478840.1_1_X:118974578-118977244:-|nuORF;nc|ENSG00000125351|Q9BZI7-2|UPF3B;ENSG00000125351|ENST00000276201|UPF3B	ENST00000478840.1_1_X:118974578-118977244:-|nuORF	ENST00000478840.1_1_X:118974578-118977244:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.8018188476562	2	625.800285	1249.58602	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.831	1	47.754	47.254	48.254	0.92315								0	0	0	0.56276	1	4445	4445		33.922	2.3918	1				37498	3382	24973	24985	42674	42674					-0.028791953702466344
NEKRKTKA	8	Unmodified	_NEKRKTKA_					0	0	0			REV__nc|ENSG00000109943|O95727-2|CRTAM	REV__nc|ENSG00000109943|O95727-2|CRTAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.79071044921875	2	487.790715	973.566878	-0.48923	-0.00023864	0.34108	0.00016637	-0.14815	-7.2268E-05	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.88185	1	9653	9653		32.812	4.5581	1	1599600	+		37499	17784	24974	24986	42675	42675					0.0790368091164737
NEKRTLCKYFF	11	Unmodified	_NEKRTLCKYFF_					0	0	0			REV__nc|ENSG00000138468|Q9BQF6-2|SENP7	REV__nc|ENSG00000138468|Q9BQF6-2|SENP7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.6457214355469	3	483.583345	1447.72821	-1.5986	-0.00077304	3.8022	0.0018387	2.2036	0.0010656	483.91946786144393	44.3	0.11694	45.145	45.067	45.184	0.84438					4	2	2	0	0	0	0.17966	1	4069	4069		10.562	0	1	67243	+		37500	19477	24975	24987	42676	42676					0.022250621625744316
NEKTKKRKPA	10	Unmodified	_NEKTKKRKPA_					0	0	0			REV__ENST00000520859.5_1_8:91017819-91018288:+|nuORF	REV__ENST00000520859.5_1_8:91017819-91018288:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5797424316406	3	400.578811	1198.7146	3.4037	0.0013634	1.0118	0.0004053	4.4155	0.0017688	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.86802	1	13694	13694		27.047	7.0168	1	5321000	+		37501	28110	24976	24988	42677	42677					0.12319572445653648
NELAKLANI	9	Unmodified	_NELAKLANI_					0	0	0		nc|ENSG00000138741|Q13507-3|TRPC3;ENSG00000138741|ENST00000379645|TRPC3	nc|ENSG00000138741|Q13507-3|TRPC3	nc|ENSG00000138741|Q13507-3|TRPC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.7889099121094	2	493.287474	984.560395	5.5346	0.0027301	4.0432	0.0019944	9.5778	0.0047246	493.28925009778584	110.53	0.069565	110.57	110.54	110.61	0.049095					5	3	2	0	0	0	0.20789	1	13422	13422		13.454	0.64233	1	182170			37502	4324	24977	24989	42678	42678					0.06749742960278127
NELALRRRDNL	11	Unmodified	_NELALRRRDNL_					0	0	0			REV__nc|ENSG00000142192|P05067-10|APP	REV__nc|ENSG00000142192|P05067-10|APP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.732421875	3	457.260141	1368.75859	-1.6053	-0.00073404	-2.7676	-0.0012655	-4.3729	-0.0019995	457.2593449116972	30.09	0.22174	30.118	30.008	30.23	0.028618					6	4	2	0	0	0	0.17504	1	1948	1948		25.068	4.0355	1	41870	+		37503	19728	24978	24990	42679	42679					0.08896556871991379
NELASTND	8	Unmodified	_NELASTND_					0	0	0		ENST00000473577.1_1_13:30091265-30093642:-|nuORF;ENSG00000139514|ENST00000380752|SLC7A1	ENST00000473577.1_1_13:30091265-30093642:-|nuORF	ENST00000473577.1_1_13:30091265-30093642:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2470703125	2	432.190697	862.36684	1.4315	0.00061868	-0.56784	-0.00024542	0.86366	0.00037327	432.1912299740112	97.856	0.32764	98.241	97.973	98.301	0.38548					10	7	2	0	0	0	0.4196	1	11748	11748		25.574	11.437	1	32932			37504	4374	24979	24991	42680	42680					-0.06984838546622996
NELASTND	8	Unmodified	_NELASTND_					0	0	0		ENST00000473577.1_1_13:30091265-30093642:-|nuORF;ENSG00000139514|ENST00000380752|SLC7A1	ENST00000473577.1_1_13:30091265-30093642:-|nuORF	ENST00000473577.1_1_13:30091265-30093642:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2468566894531	2	432.190697	862.36684	1.4566	0.00062954	0.4616	0.0001995	1.9182	0.00082904	432.1907384331005	98.29	0.57856	98.676	98.301	98.879	0.38548					20	13	2	0	0	0	0.4196	1	11795	11795		30.318	3.6248	1	140820			37505	4374	24979	24991	42681	42681					-0.06984838546622996
NELASTSIL	9	Unmodified	_NELASTSIL_					0	0	0			REV__nc|ENSG00000152990|Q8IWK6-3|ADGRA3	REV__nc|ENSG00000152990|Q8IWK6-3|ADGRA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.25323486328125	2	474.25584	946.497126	-0.47841	-0.00022689	-2.1155	-0.0010033	-2.5939	-0.0012302	474.2547109107997	22.499	1.1216	21.888	21.633	22.755	-0.6107					48	27	2	0	0	0	0.58668	1	971	971		47.657	0	1	176200	+		37506	20326	24980	24992	42682	42682					0.021737574523854164
NELATHNSI	9	Unmodified	_NELATHNSI_					0	0	0			REV__ENSG00000095777|ENST00000642920|MYO3A	REV__ENSG00000095777|ENST00000642920|MYO3A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.82586669921875	2	499.748713	997.482873	-0.10704	-5.3491E-05	-3.7851	-0.0018916	-3.8921	-0.0019451	499.74668293371275	68.165	0.87857	68.713	68.072	68.951	0.54819					48	20	3	0	0	0	0.20789	1	7455	7455		68.787	0	1	737660	+		37507	17068	24981	24993	42683	42683					-0.015968949759212592
NELDCDEKFD	10	Carbamidomethyl (C)	_NELDC(Carbamidomethyl (C))DEKFD_	NELDC(1)DEKFD		NELDC(88)DEKFD		0	1	0			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.7530517578125	2	642.756075	1283.4976	-0.76534	-0.00049193	-3.9905	-0.0025649	-4.7558	-0.0030568	642.7533636052166	52.144	0.88099	52.12	51.821	52.702	-0.023853					49	20	3	0	0	0	0.19302	2	4574	4574;4619		87.696	10.379	1	1141900	+		37508	23985	24982	24994	42684;42685	42684	293				-0.13281235680756254
NELDFEVGDK	10	Unmodified	_NELDFEVGDK_					0	0	0		ENSG00000107554|ENST00000324109|DNMBP	ENSG00000107554|ENST00000324109|DNMBP	ENSG00000107554|ENST00000324109|DNMBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.2683715820312	2	583.272218	1164.52988	0.083774	4.8863E-05	-4.0137	-0.0023411	-3.9299	-0.0022922	583.2703593729441	20.232	0.56566	20.162	19.863	20.429	-0.069735					42	22	2	0	0	0	0.66675	1	522	522		46.457	11.305	1	56549			37509	2350	24983	24995	42686	42686					-0.04580080215419002
NELEQLKQLK	10	Unmodified	_NELEQLKQLK_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.90667724609375	3	414.906594	1241.69795	-0.051353	-2.1307E-05	0.53174	0.00022062	0.48039	0.00019932	414.9066436377496	31.278	0.6509	31.358	31.077	31.728	0.079836					31	14	3	0	0	0	0.85981	1	2111	2111		33.039	6.2897	1	411690	+		37510	16404	24984	24996	42687	42687					0.08677026769032636
NELHVRQEKL	10	Unmodified	_NELHVRQEKL_					0	0	0			REV__nc|ENSG00000115306|Q01082-3|SPTBN1;REV__nc|ENSG00000070182|P11277-3|SPTB;REV__ENSG00000160460|ENST00000598249|SPTBN4	REV__nc|ENSG00000115306|Q01082-3|SPTBN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2056884765625	3	422.570204	1264.68878	1.0625	0.00044899	-0.4605	-0.00019459	0.60202	0.0002544	422.5699873945344	28.445	0.34235	28.272	28.057	28.399	-0.17336					13	8	2	0	0	0	0.37624	1	1721	1721		14.086	4.8742	1	52132	+		37511	18106;16597;20721	24985	24997	42688	42688					0.0670267820337358
NELIHYLD	8	Unmodified	_NELIHYLD_					0	0	0			REV__ENSG00000138083|ENST00000260653|SIX3	REV__ENSG00000138083|ENST00000260653|SIX3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7545471191406	2	508.756007	1015.49746	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.971	1	70.355	69.855	70.855	0.38416								0	0	0	0.29452	1	7739	7739		33.516	1.9858	1		+		37512	19439	24986	24998	42689	42689					-0.009668228277746493
NELKKSKSLS	10	Unmodified	_NELKKSKSLS_					0	0	0			REV__ENST00000374787.7_1_9:106856952-106857030:+|nuORF	REV__ENST00000374787.7_1_9:106856952-106857030:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3300170898438	2	567.32987	1132.64519	1.3743	0.0007797	-1.1771	-0.0006678	0.19724	0.0001119	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.86218	1	10919	10919		32.812	1.2826	1	6182600	+		37513	25794	24987	24999	42690	42690					0.08417068706262398
NELKQPINKG	10	Unmodified	_NELKQPINKG_					0	0	0		nc|ENSG00000137804|Q9BXS6-7|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;chr15:41365589-41365816|60|18.43|0.54|5.09|+|ENST00000560898|NUSAP1,NUSAP1	nc|ENSG00000137804|Q9BXS6-7|NUSAP1	nc|ENSG00000137804|Q9BXS6-7|NUSAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.8246459960938	2	570.822212	1139.62987	-0.44856	-0.00025605	4.3073	0.0024587	3.8587	0.0022026	570.8243844075674	61.574	0.9001	61.59	61.334	62.234	0.015724					68	38	2	0	0	0	0.86106	1	5361	5361		33.922	3.6039	1	801440			37514	14946	24988	25000	42691	42691					0.06564201909031908
NELLKSYQW	9	Unmodified	_NELLKSYQW_					0	0	0		nc|ENSG00000120885|P10909-2|CLU;nc|ENSG00000120885|P10909-3|CLU;nc|ENSG00000120885|P10909-4|CLU;ENST00000522299.5_1_8:27457218-27472184:-|nuORF;nc|ENSG00000120885|P10909-6|CLU;ENSG00000120885|ENST00000316403|CLU;nc|ENSG00000120885|P10909-5|CLU	nc|ENSG00000120885|P10909-2|CLU	nc|ENSG00000120885|P10909-2|CLU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.80322265625	2	590.803488	1179.59242	-0.6461	-0.00038172	0.82877	0.00048964	0.18268	0.00010793	590.80385518195	64.165	0.8848	64.164	63.857	64.742	-0.00078583					75	27	4	0	0	0	2.0213E-05	8	5979	5962;5971;5979;5988;5997;6007;6016;6024		154.12	42.768	1	823670			37515	14876	24989	25001	42692;42693;42694;42695;42696;42697;42698;42699	42694					0.009811106434199246
NELLKSYQW	9	Unmodified	_NELLKSYQW_					0	0	0		nc|ENSG00000120885|P10909-2|CLU;nc|ENSG00000120885|P10909-3|CLU;nc|ENSG00000120885|P10909-4|CLU;ENST00000522299.5_1_8:27457218-27472184:-|nuORF;nc|ENSG00000120885|P10909-6|CLU;ENSG00000120885|ENST00000316403|CLU;nc|ENSG00000120885|P10909-5|CLU	nc|ENSG00000120885|P10909-2|CLU	nc|ENSG00000120885|P10909-2|CLU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8032836914062	2	590.803488	1179.59242	0.39557	0.00023371	-0.0070515	-4.1661E-06	0.38852	0.00022954	590.803228900366	64.063	0.94309	64.029	63.743	64.686	-0.034256					71	25	4	0	0	0	3.7454E-20	7	6098	6076;6086;6098;6109;6119;6127;6137		176.09	39.819	1	887280			37516	14876	24989	25001	42700;42701;42702;42703;42704;42705;42706	42702					0.009811106434199246
NELLKSYQW	9	Unmodified	_NELLKSYQW_					0	0	0		nc|ENSG00000120885|P10909-2|CLU;nc|ENSG00000120885|P10909-3|CLU;nc|ENSG00000120885|P10909-4|CLU;ENST00000522299.5_1_8:27457218-27472184:-|nuORF;nc|ENSG00000120885|P10909-6|CLU;ENSG00000120885|ENST00000316403|CLU;nc|ENSG00000120885|P10909-5|CLU	nc|ENSG00000120885|P10909-2|CLU	nc|ENSG00000120885|P10909-2|CLU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8033447265625	2	590.803488	1179.59242	-2.3707	-0.0014006	2.5348	0.0014976	0.16408	9.6938E-05	590.8048142478464	63.97	0.98344	63.997	63.65	64.634	0.027138					67	27	4	0	0	0	2.5939E-13	5	6019	5989;5998;6009;6019;6029		167.23	30.91	1	805220			37517	14876	24989	25001	42707;42708;42709;42710;42711	42710					0.009811106434199246
NELMKLKPPA	10	Unmodified	_NELMKLKPPA_					0	0	0		nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-4|SBNO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.8237915039062	2	570.825909	1139.63727	0.16054	9.164E-05	-2.8319	-0.0016165	-2.6714	-0.0015249	570.8240970044897	61.664	0.90487	61.631	61.356	62.261	-0.033173					76	36	3	0	0	0	0.80179	1	5825	5825		39.253	6.4404	1	637440			37518	4391;14960	24990	25002	42712	42712					0.07303218185097649
NELMKLKPPA	10	Unmodified	_NELMKLKPPA_					0	0	0		nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-4|SBNO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.8233032226562	2	570.825909	1139.63727	-0.44856	-0.00025605	-2.169	-0.0012381	-2.6175	-0.0014942	570.8243844075674	61.574	0.9001	61.59	61.334	62.234	0.015724					68	38	2	0	0	0	0.86698	1	5367	5367		28.081	2.0181	1	801440			37519	4391;14960	24990	25002	42713	42713					0.07303218185097649
NELPEQHVLY	10	Unmodified	_NELPEQHVLY_					0	0	0			REV__nc|ENSG00000118257|O60462-6|NRP2	REV__nc|ENSG00000118257|O60462-6|NRP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3115844726562	2	621.311677	1240.6088	-0.48748	-0.00030287	3.7448	0.0023267	3.2573	0.0020238	621.3138017387486	68.778	0.94327	68.741	68.457	69.4	-0.036301					71	37	3	0	0	0	0.76096	1	6690	6690		41.427	2.1738	1	439870	+		37520	18298	24991	25003	42714	42714					-0.0018780819048060948
NELPEQHVLY	10	Unmodified	_NELPEQHVLY_					0	0	0			REV__nc|ENSG00000118257|O60462-6|NRP2	REV__nc|ENSG00000118257|O60462-6|NRP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3131103515625	2	621.311677	1240.6088	-0.62332	-0.00038727	4.0504	0.0025166	3.4271	0.0021293	621.3140085474115	68.614	0.80863	68.647	68.364	69.173	0.033005					72	32	3	0	0	0	0.8608	1	6537	6537		34.173	0.65696	1	488350	+		37521	18298	24991	25003	42715	42715					-0.0018780819048060948
NELPPINSF	9	Unmodified	_NELPPINSF_					0	0	0			REV__ENSG00000124827|ENST00000379491|GCM2	REV__ENSG00000124827|ENST00000379491|GCM2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7626953125	2	515.763832	1029.51311	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.877	1	54.291	53.791	54.791	0.4139								0	0	0	0.33445	1	5461	5461		61.691	2.9093	1		+		37522	18618	24992	25004	42716	42716					-0.00046536310719602625
NELTGLFTSI	10	Unmodified	_NELTGLFTSI_					0	0	0			REV__nc|ENSG00000125386|P78312|FAM193A	REV__nc|ENSG00000125386|P78312|FAM193A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.792236328125	2	547.790047	1093.56554	-0.32571	-0.00017842	0.99445	0.00054475	0.66874	0.00036633	547.7909213570138	58.838	0.4333	59.391	59.3	59.733	0.55323					19	10	2	0	0	0	0.42393	1	6197	6197		62.107	1.1355	1	594100	+		37523	29823	24993	25005	42717	42717					0.02250002032269549
NELVLLIV	8	Unmodified	_NELVLLIV_					0	0	0		ENST00000340648.5_1_21:45114371-45114962:+|nuORF	ENST00000340648.5_1_21:45114371-45114962:+|nuORF	ENST00000340648.5_1_21:45114371-45114962:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7887268066406	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.79929	1	2662	2662		18.324	0	1	1012300			37524	10235	24994	25006	42718	42718					0.1098471659677216
NELVSVEDLL	10	Unmodified	_NELVSVEDLL_					0	0	0		ENST00000449367.5_1_7:100883509-100888309:-|nuORF;ENSG00000214253|ENST00000223136|FIS1	ENST00000449367.5_1_7:100883509-100888309:-|nuORF	ENST00000449367.5_1_7:100883509-100888309:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.7473754882812	2	565.800611	1129.58667	-0.80683	-0.0004565	1.8754	0.0010611	1.0685	0.00060458	566.3051885547775	72.488	0.25046	72.874	72.667	72.917	0.38582					6	5	2	0	0	0	0.37624	1	8084	8084		49.442	8.0149	1	50795			37525	8622	24995	25007	42719	42719					0.027059673411031326
NELYICHRS	9	Unmodified	_NELYICHRS_					0	0	0			REV__ENSG00000174501|ENST00000295246|ANKRD36C;REV__ENST00000575193.1_1_2:89102295-89104913:+|nuORF	REV__ENSG00000174501|ENST00000295246|ANKRD36C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.770263671875	2	567.771665	1133.52878	-1.0242	-0.00058149	-1.6715	-0.00094901	-2.6956	-0.0015305	567.7704116617856	57.67	0.46568	57.67	57.392	57.857	0					32	17	3	0	0	0	0.48102	1	4981	4981		52.937	3.4007	1	93386	+		37526	21999;28982	24996	25008	42720	42720					-0.032645730653030114
NEMADIQV	8	Unmodified	_NEMADIQV_					0	0	0		ENST00000494718.5_1_X:51637400-51640272:+|nuORF;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENSG00000179222|ENST00000326587|MAGED1;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	ENST00000494718.5_1_X:51637400-51640272:+|nuORF	ENST00000494718.5_1_X:51637400-51640272:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.21405029296875	2	460.213117	918.411682	4.3602	0.0020066	-1.5449	-0.00071099	2.8153	0.0012956	460.21235011332533	107.04	0.72292	107.19	106.81	107.53	0.14929					46	22	3	0	0	0	0.89962	1	13102	13102		38.806	1.647	1	1388300			37527	7257	24997	25009	42721	42721					-0.050787310049372536
NEMKEKFSD	9	Unmodified	_NEMKEKFSD_					0	0	0			REV__nc|ENSG00000160191|O76083-5|PDE9A	REV__nc|ENSG00000160191|O76083-5|PDE9A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.8450927734375	2	564.255514	1126.49647	-0.57438	-0.00032409	-2.6777	-0.0015109	-3.2521	-0.001835	564.2541171992144	72.017	1.0401	72.403	72.042	73.082	0.38581					43	24	3	0	0	0	0.20789	1	8105	8105		14.137	0	1	427280	+		37528	29964	24998	25010	42722	42722					-0.06171405258965024
NENAKRRG	8	Unmodified	_NENAKRRG_					0	0	0			REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7554931640625	2	472.754664	943.494775	-0.42571	-0.00020126	3.5402	0.0016737	3.1145	0.0014724	472.756162330355	25.453	0.69131	25.416	25.118	25.81	-0.037176					45	20	3	0	0	0	0.89291	1	993	993		36.447	2.2742	1	115270	+		37529	17416	24999	25011	42723	42723					0.02076766557956944
NENDIITHF	9	Unmodified	_NENDIITHF_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.76171875	2	551.76182	1101.50909	-0.67262	-0.00037112	0.95687	0.00052796	0.28425	0.00015684	551.7621539159356	58.792	0.6861	58.778	58.436	59.122	-0.013729					53	23	3	0	0	0	0.17181	4	5359	5351;5359;5369;5387		79.713	18.741	1	191960			37530	2649	25000	25012	42724;42725;42726;42727	42725					-0.03760625804443407
NENDIITHF	9	Unmodified	_NENDIITHF_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.76025390625	2	551.76182	1101.50909	0.61129	0.00033728	-0.40486	-0.00022339	0.20643	0.0001139	551.7614785938176	58.708	0.71088	58.677	58.367	59.078	-0.030888					47	23	3	0	0	0	0.010555	4	5465	5456;5465;5473;5481		132.76	69.224	1	212330			37531	2649	25000	25012	42728;42729;42730;42731	42729					-0.03760625804443407
NENDIITHF	9	Unmodified	_NENDIITHF_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.759765625	2	551.76182	1101.50909	-0.373	-0.00020581	0.46786	0.00025815	0.094858	5.2339E-05	551.7618561674817	58.58	0.6534	58.613	58.4	59.054	0.033905					49	22	3	0	0	0	0.096131	4	5376	5376;5383;5391;5399		93.195	36.474	1	181420			37532	2649	25000	25012	42732;42733;42734;42735	42732					-0.03760625804443407
NENDIRVMF	9	Unmodified	_NENDIRVMF_					0	0	0		nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-3|CELF2;ENSG00000048740|ENST00000633077|CELF2	nc|ENSG00000048740|O95319-5|CELF2	nc|ENSG00000048740|O95319-5|CELF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.2732543945312	2	569.271498	1136.52844	-1.1605	-0.00066064	0.59128	0.0003366	-0.56921	-0.00032404	569.2716548634849	63.557	0.43304	63.552	63.353	63.786	-0.0055504					36	20	2	0	0	0	0.29259	3	5915	5904;5915;5921		65.465	15.656	1	177390			37533	978	25001	25013	42736;42737;42738	42737					-0.03435992785171038
NENDIRVMF	9	Unmodified	_NENDIRVMF_					0	0	0		nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-3|CELF2;ENSG00000048740|ENST00000633077|CELF2	nc|ENSG00000048740|O95319-5|CELF2	nc|ENSG00000048740|O95319-5|CELF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.2753295898438	2	569.271498	1136.52844	-0.036344	-2.069E-05	-0.11168	-6.3578E-05	-0.14803	-8.4268E-05	569.2711420389895	63.396	0.70454	63.362	63.146	63.851	-0.03371					55	29	3	0	0	0	0.66686	2	6006	6006;6038		42.864	7.7122	1	162990			37534	978	25001	25013	42739;42740	42739					-0.03435992785171038
NENDIRVMF	9	Unmodified	_NENDIRVMF_					0	0	0		nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-3|CELF2;ENSG00000048740|ENST00000633077|CELF2	nc|ENSG00000048740|O95319-5|CELF2	nc|ENSG00000048740|O95319-5|CELF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.2730712890625	2	569.271498	1136.52844	-0.11869	-6.7568E-05	-0.094451	-5.3768E-05	-0.21314	-0.00012134	569.2712830824312	63.361	0.53594	63.389	63.175	63.711	0.027142					45	24	2	0	0	0	0.34325	3	5938	5916;5923;5938		61.691	22.438	1	200210			37535	978	25001	25013	42741;42742;42743	42743					-0.03435992785171038
NENDWDPE	8	Unmodified	_NENDWDPE_					0	0	0			REV__nc|ENSG00000157087|Q01814-4|ATP2B2	REV__nc|ENSG00000157087|Q01814-4|ATP2B2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.693115234375	2	509.691061	1017.36757	0.24075	0.00012271	4.2123	0.002147	4.4531	0.0022697	509.6930028411249	39.899	0.65054	39.869	39.608	40.258	-0.03027					26	15	2	0	0	0	0.89494	1	2809	2809		37.159	2.9866	1	113730	+		37536	20525	25002	25014	42744	42744					-0.14042043897563872
NENHSGELW	9	Unmodified	_NENHSGELW_					0	0	0		nc|ENSG00000166333|Q13418-3|ILK;ENSG00000166333|ENST00000299421|ILK	nc|ENSG00000166333|Q13418-3|ILK	nc|ENSG00000166333|Q13418-3|ILK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.2352294921875	2	543.23597	1084.45739	-0.26742	-0.00014527	-0.83624	-0.00045427	-1.1037	-0.00059955	543.2352587794055	43.107	0.82066	43.071	42.714	43.534	-0.035816					39	18	3	0	0	0	0.28163	1	3361	3361		66.429	0.6261	1	316020			37537	6179	25003	25015	42745	42745					-0.08146369498331296
NENLRWKKEQT	11	Unmodified	_NENLRWKKEQT_					0	0	0		nc|ENSG00000107099|Q8NF50-4|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;ENSG00000107099|ENST00000432829|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	482.49481201171875	3	482.588035	1444.74228	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.309	1	31.367	30.867	31.867	0.058315								0	0	0	0.56276	1	1418	1418		17.833	1.3033	1				37538	2330	25004	25016	42746	42746					0.03769430915212979
NENNSLLIE	9	Unmodified	_NENNSLLIE_					0	0	0		nc|ENSG00000163406|Q16348-2|SLC15A2;ENSG00000163406|ENST00000489711|SLC15A2	nc|ENSG00000163406|Q16348-2|SLC15A2	nc|ENSG00000163406|Q16348-2|SLC15A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.7598266601562	2	523.261653	1044.50875	0.5992	0.00031354	-3.2901	-0.0017216	-2.6909	-0.001408	523.7604804784513	60.52	0.95633	60.487	59.981	60.938	-0.032513					74	26	4	0	0	0	0.76255	1	5720	5720		35.618	1.4457	1	391710			37539	5795	25005	25017	42747	42747					-0.011720455242766548
NENPLRALY	9	Unmodified	_NENPLRALY_					0	0	0		ENSG00000149269|ENST00000356341|PAK1;nc|ENSG00000149269|Q13153-2|PAK1;ENSG00000180370|ENST00000327134|PAK2;ENSG00000077264|ENST00000372007|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914-3|PAK3	ENSG00000149269|ENST00000356341|PAK1	ENSG00000149269|ENST00000356341|PAK1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.828857421875	2	545.288005	1088.56146	-0.57589	-0.00031403	0.79054	0.00043107	0.21465	0.00011705	545.2881512847337	60.031	0.5484	60.063	59.728	60.277	0.032822					17	14	2	0	0	0	0.20789	1	5560	5560		31.53	0	1	123600			37540	5012	25006	25018	42748	42748					0.020719573291898996
NEPFVEKY	8	Unmodified	_NEPFVEKY_					0	0	0			REV__nc|ENSG00000087053|Q13614-2|MTMR2	REV__nc|ENSG00000087053|Q13614-2|MTMR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.2500610351562	2	513.250557	1024.48656	-0.28551	-0.00014654	0.14174	7.2748E-05	-0.14377	-7.3788E-05	513.2505615191272	71.126	0.99968	71.511	71	71.999	0.3845					48	23	3	0	0	0	0.90837	1	7910	7910		56.721	3.7844	1	845970	+		37541	16919	25007	25019	42749	42749					-0.024702252020460946
NEPPQSPVPL	10	Unmodified	_NEPPQSPVPL_					0	0	0			REV__ENST00000570168.1_1_16:919345-920044:-|nuORF	REV__ENST00000570168.1_1_16:919345-920044:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.2822875976562	2	539.282389	1076.55022	-0.025946	-1.3992E-05	-1.3086	-0.0007057	-1.3345	-0.00071969	539.2814842127906	41.019	0.63779	41.023	40.753	41.391	0.0043983					55	23	3	0	0	0	0.67571	1	2647	2647		45.972	1.8554	1	583750	+		37542	28920	25008	25020	42750	42750					0.01501135235048423
NEPQCPPA	8	Unmodified	_NEPQCPPA_					0	0	0		ENST00000260247.9_1_11:102962591-102962891:-|nuORF	ENST00000260247.9_1_11:102962591-102962891:-|nuORF	ENST00000260247.9_1_11:102962591-102962891:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.18865966796875	2	428.186903	854.359253	1.4532	0.00062226	1.9941	0.00085386	3.4474	0.0014761	428.18810074524066	95.137	2.4856	95.57	94.801	97.287	0.4324					110	59	3	0	0	0	0.87922	1	11352	11352		31.955	2.8053	1	1692700			37543	9383	25009	25021	42751	42751					-0.07375269347892299
NEPSPDAGLLL	11	Unmodified	_NEPSPDAGLLL_					0	0	0			REV__nc|ENSG00000179869|Q86UQ4|ABCA13	REV__nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.8453979492188	2	563.292953	1124.57135	0.41606	0.00023436	-0.32159	-0.00018115	0.094467	5.3213E-05	563.2930339959178	72.563	0.37304	73.117	72.818	73.191	0.55386					12	8	2	0	0	0	0.17226	1	8145	8145		42.864	22.867	1	83068	+		37544	22360	25010	25022	42752	42752					0.014051005439114306
NEPTGLALLRG	11	Unmodified	_NEPTGLALLRG_					0	0	0			REV__CON__Q6T181	REV__CON__Q6T181	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.8136596679688	2	570.822212	1139.62987	0.16054	9.164E-05	3.6443	0.0020803	3.8049	0.0021719	570.8240970044897	61.664	0.90487	61.631	61.356	62.261	-0.033173					76	36	3	0	0	0	0.50531	1	5849	5849		51.528	1.9917	1	637440	+	+	37545	16023	25011	25023	42753	42753					0.06564201909009171
NEPTPNCDP	9	Unmodified	_NEPTPNCDP_					0	0	0			REV__nc|ENSG00000120949|P28908-3|TNFRSF8	REV__nc|ENSG00000120949|P28908-3|TNFRSF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.6968688964844	2	493.697832	985.38111	0.16233	8.014E-05	-0.38954	-0.00019231	-0.22721	-0.00011217	493.69751957924177	31.324	1.503	31.328	30.796	32.299	0.0037212					89	34	4	0	0	0	0.68711	1	2188	2188		41.427	0.64845	1	3976300	+		37546	18439	25012	25024	42754	42754					-0.11216509389976181
NEPYETGSKG	10	Unmodified	_NEPYETGSKG_					0	0	0			REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	REV__nc|ENSG00000196912|Q8N2N9-3|ANKRD36B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.81396484375	2	541.24346	1080.47237	0.11309	6.1208E-05	-0.090206	-4.8823E-05	0.022881	1.2384E-05	541.2435789158868	34.605	0.56449	34.815	34.563	35.127	0.21003					25	13	2	0	0	0	0.37624	1	2565	2565		36.447	0	1	296340	+		37547	23179	25013	25025	42755	42755					-0.0646492242099157
NEQCDLME	8	Unmodified	_NEQCDLME_					0	0	0			REV__chr6:70142820-70144210|16|37.31|0.42|6.49|+|1|COL19A1,COL19A1|1	REV__chr6:70142820-70144210|16|37.31|0.42|6.49|+|1|COL19A1,COL19A1|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.1825256347656	2	491.186242	980.357932	-1.1858	-0.00058245	-0.59789	-0.00029368	-1.7837	-0.00087613	491.1858773264547	74.204	0.57065	74.204	73.966	74.537	0					31	25	2	0	0	0	0.85277	1	6688	6688		25.45	1.2474	1	119110	+		37548	15886	25014	25026	42756	42756					-0.13303271498944014
NEQGETTDF	9	Unmodified	_NEQGETTDF_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.2771606445312	2	520.711993	1039.40943	1.2605	0.00065634	-0.82929	-0.00043182	0.43117	0.00022452	520.7116546172231	36.719	0.91555	37.205	36.704	37.619	0.48581					32	21	2	0	0	0	0.20789	1	2978	2978		10.265	1.4429	1	65055	+		37549	22085	25015	25027	42757	42757					-0.10869488209073097
NEQGETTDF	9	Unmodified	_NEQGETTDF_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	520.711993	1039.40943	0.96991	0.00050505	-0.05363	-2.7926E-05	0.91628	0.00047712	520.7119055955935	36.82	0.82532	37.102	36.638	37.464	0.28173	-0.051809	0.00033471	NaN	10.265	32	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84012	+		37550	22085	25015	25027							-0.10869488209073097
NEQLLPAMD	9	Unmodified	_NEQLLPAMD_					0	0	0			REV__ENSG00000267673|ENST00000393708|FDX2	REV__ENSG00000267673|ENST00000393708|FDX2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.763916015625	2	515.747324	1029.4801	-0.1091	-5.627E-05	0.49173	0.00025361	0.38263	0.00019734	515.7477925189565	53.317	0.41357	53.932	53.655	54.069	0.61436					14	9	2	0	0	0	0.20789	1	5419	5419		39.253	19.256	1	145660	+		37551	23970	25016	25028	42758	42758					-0.033464864250845494
NEQLRLLKIL	10	Unmodified	_NEQLRLLKIL_					0	0	0		ENSG00000162654|ENST00000355754|GBP4	ENSG00000162654|ENST00000355754|GBP4	ENSG00000162654|ENST00000355754|GBP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9329528808594	3	413.930962	1238.77106	1.6433	0.00068023	2.1649	0.00089611	3.8082	0.0015763	413.9318142026393	43.114	2.2589	43.114	42.157	44.416	0.00016785					149	54	3	0	0	0	0.85259	2	3334	3334;3345		20.03	1.4994	1	500010			37552	5714	25017	25029	42759;42760	42759					0.161222002823024
NEQLRLLKIL	10	Unmodified	_NEQLRLLKIL_					0	0	0		ENSG00000162654|ENST00000355754|GBP4	ENSG00000162654|ENST00000355754|GBP4	ENSG00000162654|ENST00000355754|GBP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9321594238281	3	413.930962	1238.77106	0.21387	8.8526E-05	4.0224	0.001665	4.2363	0.0017535	413.93255960283653	42.979	1.989	43.044	42.116	44.105	0.065033					113	52	3	0	0	0	0.85259	2	2953	2942;2953		20.837	2.3061	1	432840			37553	5714	25017	25029	42761;42762	42762					0.161222002823024
NEQLYMMIFG	10	Unmodified	_NEQLYMMIFG_					0	0	0		ENSG00000180251|ENST00000295269|SLC9A4	ENSG00000180251|ENST00000295269|SLC9A4	ENSG00000180251|ENST00000295269|SLC9A4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.837646484375	3	415.859598	1244.55697	0.18606	7.7374E-05	-3.8744	-0.0016112	-3.6883	-0.0015338	416.1921566107247	30.352	0.21902	30.301	30.13	30.349	-0.051756					7	4	2	0	0	0	0.37624	1	1987	1987		20.837	0	1	27002			37554	7320	25018	25030	42763	42763					-0.05553011200254332
NERECSIQR	9	Unmodified	_NERECSIQR_					0	0	0		nc|ENSG00000175198|P05165-3|PCCA;nc|ENSG00000175198|P05165-2|PCCA;ENSG00000175198|ENST00000376285|PCCA	nc|ENSG00000175198|P05165-3|PCCA	nc|ENSG00000175198|P05165-3|PCCA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.804931640625	2	567.769654	1133.52475	1.0327	0.00058632	3.3964	0.0019284	4.4291	0.0025147	567.7710478526213	63.568	0.16652	64.123	64.046	64.213	0.55449					5	3	2	0	0	0	0.20789	1	6855	6855		40.778	19.831	1	39920			37555	6995	25019	25031	42764	42764					-0.03666662559044198
NERKQASAIK	10	Unmodified	_NERKQASAIK_					0	0	0		ENSG00000089199|ENST00000378961|CHGB	ENSG00000089199|ENST00000378961|CHGB	ENSG00000089199|ENST00000378961|CHGB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.8271484375	2	572.825286	1143.63602	0.27209	0.00015586	3.8433	0.0022015	4.1154	0.0023574	572.8273163162594	35.283	0.57508	35.53	35.281	35.856	0.2477					33	14	3	0	0	0	0.47091	1	2681	2681		58.23	1.7961	1	1414600			37556	1617	25020	25032	42765	42765					0.0699472014055118
NERQVRLVLH	10	Unmodified	_NERQVRLVLH_					0	0	0			REV__nc|ENSG00000117411|O60909-2|B4GALT2	REV__nc|ENSG00000117411|O60909-2|B4GALT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5925598144531	3	421.914194	1262.72075	-0.50337	-0.00021238	0.87304	0.00036835	0.36967	0.00015597	421.91427959141555	49.359	0.15355	49.266	49.153	49.307	-0.093178					5	3	2	0	0	0	0.37624	1	3813	3813		19.263	2.5453	1	34450	+		37557	29802	25021	25033	42766	42766					0.09990090677183616
NERYHLLWKWR	11	Unmodified	_NERYHLLWKWR_					0	0	0			REV__nc|ENSG00000108021|Q5VWN6-2|TASOR2	REV__nc|ENSG00000108021|Q5VWN6-2|TASOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	534.6244506835938	3	534.288031	1599.84226	0.12611	6.7377E-05	3.1225	0.0016683	3.2486	0.0017357	534.6239915222694	32.871	0.82455	32.874	32.524	33.348	0.0030785					58	19	4	0	0	0	0.86672	1	1871	1871		4.8861	1.2671	1	191660	+		37558	17691	25022	25034	42767	42767					0.06633713039673239
NERYHQRKEWW	11	Unmodified	_NERYHQRKEWW_					0	0	0			REV__ENST00000411999.1_1_2:197893450-197893558:-|nuORF	REV__ENST00000411999.1_1_2:197893450-197893558:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.5972290039062	3	544.599046	1630.77531	0.01549	8.4356E-06	-2.4765	-0.0013487	-2.4611	-0.0013403	544.5976957103844	18.933	0.76329	18.977	18.651	19.414	0.043747					73	36	5	0	0	0	0.82431	2	383	383;388		7.6794	1.6784	1	471080	+		37559	26371	25023	25035	42768;42769	42768					-0.014849422420866176
NERYHQRKEWW	11	Unmodified	_NERYHQRKEWW_					0	0	0			REV__ENST00000411999.1_1_2:197893450-197893558:-|nuORF	REV__ENST00000411999.1_1_2:197893450-197893558:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	544.5984497070312	3	544.599046	1630.77531	0.12497	6.8057E-05	-2.7259	-0.0014845	-2.601	-0.0014165	544.5975472895066	18.741	0.574	18.807	18.523	19.097	0.066298					61	28	4	0	0	0	0.86672	1	378	378		4.8861	1.2671	1	664830	+		37560	26371	25023	25035	42770	42770					-0.014849422420866176
NERYHQRKEWW	11	Unmodified	_NERYHQRKEWW_					0	0	0			REV__ENST00000411999.1_1_2:197893450-197893558:-|nuORF	REV__ENST00000411999.1_1_2:197893450-197893558:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.9156799316406	4	408.701103	1630.77531	0.10437	4.2655E-05	-2.5054	-0.001024	-2.401	-0.0009813	408.70009896105705	18.57	0.47669	17.949	17.722	18.198	-0.62141					27	10	3	0	0	0	0.18318	1	381	381		0.31226	0	1	177580	+		37561	26371	25023	25035	42771	42771					-0.014849422420866176
NESAFRFLK	9	Unmodified	_NESAFRFLK_					0	0	0			REV__ENST00000435265.5_1_22:20106640-20110140:+|nuORF	REV__ENST00000435265.5_1_22:20106640-20110140:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.2947998046875	2	556.298373	1110.58219	-0.12389	-6.8919E-05	-0.29086	-0.00016181	-0.41475	-0.00023072	556.2981738648185	75.221	0.59676	75.785	75.541	76.138	0.56458					27	14	3	0	0	0	0.58668	1	8524	8524		47.657	0	1	558130	+		37562	17114	25024	25036	42772	42772					0.031325477088330445
NESNKYKKKL	10	Unmodified	_NESNKYKKKL_					0	0	0			REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.9223937988281	3	417.906705	1250.69829	-1.772	-0.00074055	1.1895	0.00049708	-0.58258	-0.00024346	417.9072595215183	105.59	0.83541	105.75	105.13	105.96	0.15924					29	21	2	0	0	0	0.37624	1	11299	11299		23.378	0	1	436490	+		37563	16960	25025	25037	42773	42773					0.08296446488884612
NESQFQYFYFR	11	Unmodified	_NESQFQYFYFR_					0	0	0		ENST00000551270.1_1_12:104283206-104309165:-|nuORF;nc|ENSG00000214198|Q6P2S7-2|TTC41P;nc|ENSG00000214198|Q6P2S7|TTC41P	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.78228759765625	3	510.233369	1527.67828	0.58509	0.00029853	1.4448	0.00073717	2.0299	0.0010357	510.2340832787697	26.143	0.34339	26.189	26.004	26.348	0.045509					15	8	2	0	0	0	0.17586	1	1091	1091		27.644	13.558	1	57604			37564	13669	25026	25038	42774	42774					-0.06445349241721487
NESQFQYFYFR	11	Unmodified	_NESQFQYFYFR_					0	0	0		ENST00000551270.1_1_12:104283206-104309165:-|nuORF;nc|ENSG00000214198|Q6P2S7-2|TTC41P;nc|ENSG00000214198|Q6P2S7|TTC41P	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	ENST00000551270.1_1_12:104283206-104309165:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	510.233369	1527.67828	-1.7855	-0.000911	3.2497	0.0016581	1.4643	0.00074712	510.23508350372947	26.219	0.22912	26.219	26.066	26.295	0	-0.0086425	0.0018008	NaN	27.644	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31342			37565	13669	25026	25038							-0.06445349241721487
NESSARKRHGK	11	Unmodified	_NESSARKRHGK_					0	0	0			REV__ENST00000525183.1_1_11:75848287-75852454:+|nuORF	REV__ENST00000525183.1_1_11:75848287-75852454:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.8988952636719	3	423.897203	1268.66978	-0.47617	-0.00020185	3.8213	0.0016198	3.3451	0.001418	423.89873875945534	28.817	0.64665	28.788	28.481	29.127	-0.029207					26	14	2	0	0	0	0.60888	1	1767	1767		43.419	2.3385	1	367580	+		37566	23321	25027	25039	42775	42775					0.046191416323154044
NESYHYARRQF	11	Unmodified	_NESYHYARRQF_					0	0	0		ENSG00000114480|ENST00000429644|GBE1;ENST00000484687.1_1_3:81584326-81627079:-|nuORF	ENSG00000114480|ENST00000429644|GBE1	ENSG00000114480|ENST00000429644|GBE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79571533203125	3	490.900613	1469.68001	-1.0744	-0.00052744	-3.7006	-0.0018166	-4.775	-0.0023441	491.23322468629226	45.763	0.16245	46.235	46.132	46.294	0.47139					5	3	2	0	0	0	0.17955	1	4281	4281		5.4129	0	1	100570			37567	2773	25028	25040	42776	42776					-0.036042954331378496
NETDTPAQL	9	Unmodified	_NETDTPAQL_					0	0	0		ENSG00000188612|ENST00000420826|SUMO2;nc|ENSG00000184900|P55854-2|SUMO3;ENSG00000184900|ENST00000332859|SUMO3	ENSG00000188612|ENST00000420826|SUMO2;nc|ENSG00000184900|P55854-2|SUMO3	ENSG00000188612|ENST00000420826|SUMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.732177734375	2	494.732729	987.450904	-1.0949	-0.00054169	0.56108	0.00027758	-0.53383	-0.0002641	494.7328520200777	45.074	1.1402	45.537	45.106	46.246	0.46313					53	27	3	0	0	0	0.026116	4	4172	4154;4172;4184;4197		120.87	34.435	1	3209500			37568	7942;7651	25029	25041	42777;42778;42779;42780	42778					-0.043323074497266134
NETDTPAQL	9	Unmodified	_NETDTPAQL_					0	0	0		ENSG00000188612|ENST00000420826|SUMO2;nc|ENSG00000184900|P55854-2|SUMO3;ENSG00000184900|ENST00000332859|SUMO3	ENSG00000188612|ENST00000420826|SUMO2;nc|ENSG00000184900|P55854-2|SUMO3	ENSG00000188612|ENST00000420826|SUMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7325744628906	2	494.732729	987.450904	-1.0875	-0.00053804	0.56419	0.00027913	-0.52333	-0.00025891	494.7328553895217	44.875	0.93745	45.72	45.419	46.357	0.84438					55	22	4	0	0	0	0.002448	4	4153	4142;4153;4174;4187		141.52	31.401	1	3106300			37569	7942;7651	25029	25041	42781;42782;42783;42784	42782					-0.043323074497266134
NETKDNLT	8	Unmodified	_NETKDNLT_					0	0	0			REV__ENST00000469874.5_1_3:45867808-45883491:-|nuORF	REV__ENST00000469874.5_1_3:45867808-45883491:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.74493408203125	2	467.727446	933.44034	-1.3321	-0.00062307	-2.2819	-0.0010673	-3.614	-0.0016904	467.72599668384737	58.053	0.78147	58.447	58.12	58.901	0.39407					35	18	3	0	0	0	0.4196	1	6017	6017		10.866	0	1	625310	+		37570	20979	25030	25042	42785	42785					-0.029042901041407276
NETKFWYQMIL	11	Unmodified	_NETKFWYQMIL_					0	0	0		ENSG00000197635|ENST00000360534|DPP4;ENST00000434918.6_1_2:162849795-162888681:-|nuORF	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.298828125	3	491.579601	1471.71697	-2.32	-0.0011405	0.47663	0.0002343	-1.8434	-0.00090617	491.5796577414793	66.784	0.49776	66.813	66.628	67.126	0.028587					34	23	2	0	0	0	0.17835	1	6317	6317		16.53	7.3181	1	110910			37571	8186	25031	25043	42786	42786					-1.7599315697225393E-05
NETKTYPAF	9	Unmodified	_NETKTYPAF_					0	0	0		ENSG00000090402|ENST00000264382|SI	ENSG00000090402|ENST00000264382|SI	ENSG00000090402|ENST00000264382|SI	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	535.2136840820312	2	535.761289	1069.50803	0.7994	0.00042829	-4.1375	-0.0022167	-3.3381	-0.0017884	535.7587834882521	29.916	0.52922	29.901	29.601	30.13	-0.015167					18	11	2	0	0	0	0.20789	1	1555	1555		18.324	12.403	1	38162			37572	1645	25032	25044	42787	42787					-0.023948401733377978
NETKVIIG	8	Unmodified	_NETKVIIG_					0	0	0			REV__nc|ENSG00000109118|Q96QT6-4|PHF12	REV__nc|ENSG00000109118|Q96QT6-4|PHF12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77099609375	2	437.255643	872.496732	-0.040801	-1.784E-05	0.62481	0.0002732	0.58401	0.00025536	437.2556381019317	38.103	0.92501	38.045	37.647	38.573	-0.057915					31	29	2	0	0	0	0.4196	1	2296	2296		26.693	11.051	1	47221	+		37573	17749	25033	25045	42788	42788					0.055383825232070194
NETLLRYL	8	Unmodified	_NETLLRYL_					0	0	0			REV__nc|ENSG00000107290|Q7Z333-3|SETX	REV__nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.2837219238281	2	511.287474	1020.5604	0.36299	0.00018559	-1.6305	-0.00083365	-1.2675	-0.00064806	511.28657650841876	42.002	2.0595	41.971	41.461	43.521	-0.030987					111	49	5	0	0	0	0.92457	1	3194	3194		47.916	0	1	6140800	+		37574	17654	25034	25046	42789	42789					0.05093742960275449
NETNGSNSHQG	11	Unmodified	_NETNGSNSHQG_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|18|1|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|18|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.2813720703125	2	572.734323	1143.45409	0.4077	0.0002335	2.575	0.0014748	2.9827	0.0017083	572.7357397881755	63.441	0.65946	63.996	63.684	64.343	0.5545					22	15	2	0	0	0	0.17457	1	6871	6871		28.081	6.1216	1	139400	+		37575	29542	25035	25047	42790	42790					-0.11189664343010008
NETPKKKKKR	10	Unmodified	_NETPKKKKKR_					0	0	0		ENSG00000277443|ENST00000612661|MARCKS	ENSG00000277443|ENST00000612661|MARCKS	ENSG00000277443|ENST00000612661|MARCKS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.5997619628906	3	419.598094	1255.77245	0.96458	0.00040474	2.9043	0.0012187	3.8689	0.0016234	419.5991830900443	24.354	1.3422	23.972	23.576	24.918	-0.38178					72	27	4	0	0	0	0.62712	1	1156	1156		48.602	9.8875	1	726260			37576	9020	25036	25048	42791	42791					0.15479834371058132
NETQLARIA	9	Unmodified	_NETQLARIA_					0	0	0		nc|ENSG00000169604|Q9H6X2-5|ANTXR1;ENSG00000169604|ENST00000303714|ANTXR1;nc|ENSG00000169604|Q9H6X2-3|ANTXR1;ENST00000463335.1_1_2:69240622-69330161:+|nuORF;nc|ENSG00000169604|Q9H6X2-4|ANTXR1;nc|ENSG00000169604|Q9H6X2-6|ANTXR1;nc|ENSG00000169604|Q9H6X2-2|ANTXR1	nc|ENSG00000169604|Q9H6X2-5|ANTXR1	nc|ENSG00000169604|Q9H6X2-5|ANTXR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2821350097656	2	508.28018	1014.54581	-0.0026912	-1.3679E-06	3.9883	0.0020272	3.9857	0.0020258	508.282055825422	21.65	0.96109	21.593	21.341	22.302	-0.057203					83	38	3	0	0	0	0.77696	1	644	644		31.53	3.6476	1	252740			37577	6510	25037	25049	42792	42792					0.039116708121468946
NETRRKKFV	9	Unmodified	_NETRRKKFV_					0	0	0			REV__nc|ENSG00000120688|O75554-2|WBP4	REV__nc|ENSG00000120688|O75554-2|WBP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3426513671875	2	589.343646	1176.67274	-0.65315	-0.00038493	-0.88363	-0.00052076	-1.5368	-0.00090569	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.76764	1	9660	9660		34.173	5.0025	1	5584100	+		37578	18421	25038	25050	42793	42793					0.09147016757128767
NETSLMDLP	9	Unmodified	_NETSLMDLP_					0	0	0			REV__ENST00000511802.5_1_5:10353827-10401026:+|nuORF	REV__ENST00000511802.5_1_5:10353827-10401026:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.7728271484375	2	510.239332	1018.46411	-1.5428	-0.0007872	2.9256	0.0014927	1.3827	0.00070553	510.24046775552324	36.363	0.98667	36.372	36.073	37.06	0.0092812					44	21	3	0	0	0	0.20789	1	2434	2434		53.351	14.099	1	181910	+		37579	19949	25039	25051	42794	42794					-0.04438192661973517
NETSRRLI	8	Unmodified	_NETSRRLI_					0	0	0			REV__ENSG00000182798|ENST00000400004|MAGEB17	REV__ENSG00000182798|ENST00000400004|MAGEB17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7801208496094	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.87922	1	8508	8508		31.955	0	1	569520	+		37580	22554	25040	25052	42795	42795					0.05187090532012917
NETVDVEDI	9	Unmodified	_NETVDVEDI_					0	0	0		nc|ENSG00000247315|Q9NUD5-2|ZCCHC3;ENSG00000247315|ENST00000500893|ZCCHC3	nc|ENSG00000247315|Q9NUD5-2|ZCCHC3	nc|ENSG00000247315|Q9NUD5-2|ZCCHC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3117065429688	2	517.237844	1032.46113	0.79757	0.00041254	-1.1772	-0.00060887	-0.37958	-0.00019633	517.2371061392207	32.597	0.89096	32.809	32.422	33.313	0.21168					38	20	2	0	0	0	0.20789	1	2342	2342		26.693	9.3279	1	129860			37581	8828	25041	25053	42796	42796					-0.05379744515130369
NEVCAGIH	8	Unmodified	_NEVCAGIH_					0	0	0			REV__ENSG00000167972|ENST00000301732|ABCA3	REV__ENSG00000167972|ENST00000301732|ABCA3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.23419189453125	2	421.694895	841.375237	-1.8233	-0.00076886	-2.2572	-0.00095186	-4.0805	-0.0017207	421.69368199516344	44.003	0.45446	44.003	43.787	44.241	0					17	10	2	0	0	0	0.4196	1	3182	3182		19.36	0	1	102090	+		37582	21442	25042	25054	42797	42797					-0.05179563110982599
NEVDAFLLA	9	Unmodified	_NEVDAFLLA_					0	0	0		ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.2112121582031	2	496.258382	990.502212	-1.3011	-0.00064567	-3.0055	-0.0014915	-4.3066	-0.0021372	496.2568990499617	29.053	0.64997	29.024	28.736	29.386	-0.029207					38	14	3	0	0	0	0.20789	1	1839	1839		27.882	3.6795	1	498250			37583	3851	25043	25055	42798	42798					0.00658061315004943
NEVDAFLLA	9	Unmodified	_NEVDAFLLA_					0	0	0		ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	496.258382	990.502212	0.39548	0.00019626	-8.8066	-0.0043703	-8.4111	-0.0041741	496.2535866678904	28.645	0.1935	28.681	28.544	28.738	0.03607	-0.22944	-0.0048644	NaN	27.882	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8951.9			37584	3851	25043	25055							0.00658061315004943
NEVECCSCIK	10	Unmodified	_NEVECCSCIK_					0	0	0		ENST00000296543.9_1_4:140310606-140310756:+|nuORF	ENST00000296543.9_1_4:140310606-140310756:+|nuORF	ENST00000296543.9_1_4:140310606-140310756:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	564.23291015625	2	564.230127	1126.4457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.021	1	18.097	17.597	18.597	0.075441								0	0	0	0.45132	1	242	242		23.523	0.48021	1				37585	9739	25044	25056	42799	42799					-0.11246393899841678
NEVERLDGF	9	Unmodified	_NEVERLDGF_					0	0	0		ENSG00000152104|ENST00000366956|PTPN14	ENSG00000152104|ENST00000366956|PTPN14	ENSG00000152104|ENST00000366956|PTPN14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.939208984375	2	539.76182	1077.50909	-0.19136	-0.00010329	3.7004	0.0019973	3.5091	0.0018941	539.7638105225585	76.472	0.49599	76.521	76.263	76.759	0.049187					24	16	2	0	0	0	0.20789	1	7361	7361		14.865	0	1	80988			37586	5155	25045	25057	42800	42800					-0.026566258044113056
NEVFNDVRL	9	Unmodified	_NEVFNDVRL_					0	0	0		ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000485542.5_1_1:113162466-113192092:+|nuORF;ENST00000476936.5_1_1:113162466-113209756:+|nuORF;ENST00000464669.1_1_7:116502674-116546397:+|nuORF;nc|ENSG00000198898|P47755-2|CAPZA2	ENSG00000116489|ENST00000263168|CAPZA1	ENSG00000116489|ENST00000263168|CAPZA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8113403320312	2	553.285463	1104.55637	-0.35447	-0.00019612	0.52166	0.00028863	0.1672	9.2507E-05	553.285737349506	59.082	0.61877	59.635	59.3	59.919	0.55323					35	15	3	0	0	0	0.19535	1	6226	6226		78.264	26.928	1	723730			37587	2921	25046	25058	42801	42801					0.008276534665810686
NEVKGPMLLLT	11	Unmodified	_NEVKGPMLLLT_					0	0	0			REV__ENST00000188312.6_1_12:100613899-100617598:+|nuORF	REV__ENST00000188312.6_1_12:100613899-100617598:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5659484863281	3	405.565291	1213.67404	-0.19603	-7.9504E-05	-1.2042	-0.00048838	-1.4002	-0.00056788	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.69687	2	5993	5993;6017		32.034	5.2844	1	328790	+		37588	24089	25047	25059	42802;42803	42802					0.0757547001101102
NEVKVLRLYER	11	Unmodified	_NEVKVLRLYER_					0	0	0		nc|ENSG00000157827|Q96PY5|FMNL2;ENSG00000157827|ENST00000288670|FMNL2	nc|ENSG00000157827|Q96PY5|FMNL2	nc|ENSG00000157827|Q96PY5|FMNL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.9430847167969	3	473.608659	1417.80415	-0.55001	-0.00026049	0.35403	0.00016767	-0.19598	-9.282E-05	473.6087143992069	17.201	0.45014	16.59	16.348	16.798	-0.6107					18	9	3	0	0	0	0.72891	1	230	230		26.753	4.9727	1	160270			37589	15024	25048	25060	42804	42804					0.11195782334380056
NEVLCIRQ	8	Unmodified	_NEVLCIRQ_					0	0	0		ENST00000601286.5_1_13:51463800-51479022:-|nuORF	ENST00000601286.5_1_13:51463800-51479022:-|nuORF	ENST00000601286.5_1_13:51463800-51479022:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7582702636719	2	487.758027	973.5015	0.36374	0.00017742	-0.3185	-0.00015535	0.045233	2.2063E-05	487.75781934835595	24.271	0.61697	23.889	23.491	24.108	-0.38178					22	13	2	0	0	0	0.93293	1	1144	1144		51.335	3.4199	1	132580			37590	14388	25049	25061	42805	42805					0.01368943394300004
NEVQCSKPPHA	11	Unmodified	_NEVQCSKPPHA_					0	0	0			REV__nc|ENSG00000139793|Q5VZF2-3|MBNL2	REV__nc|ENSG00000139793|Q5VZF2-3|MBNL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.2852783203125	2	605.287679	1208.56081	0.98247	0.00059468	-3.4293	-0.0020757	-2.4469	-0.0014811	605.2852052046003	58.208	1.6782	58.295	57.834	59.512	0.087002					167	73	3	0	0	0	0.51578	1	4921	4921		27.047	9.5793	1	1590000	+		37591	19570	25050	25062	42806	42806					-0.035132053821598674
NEVSKIVQTY	10	Unmodified	_NEVSKIVQTY_					0	0	0		nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814|ACTN1;ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8143310546875	2	590.814053	1179.61355	-0.56003	-0.00033087	0.38913	0.0002299	-0.17091	-0.00010097	590.8142458743242	52.343	0.82743	52.34	51.954	52.782	-0.0032997					57	20	4	0	0	0	0.00023668	4	4518	4506;4518;4529;4540		144.77	60.805	1	367470			37592	1269	25051	25063	42807;42808;42809;42810	42808					0.030930759523016604
NEVSKIVQTY	10	Unmodified	_NEVSKIVQTY_					0	0	0		nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814|ACTN1;ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8146362304688	2	590.814053	1179.61355	-0.074381	-4.3946E-05	0.17151	0.00010133	0.097128	5.7385E-05	590.8140810684539	52.306	0.84443	52.282	51.938	52.783	-0.023853					47	19	4	0	0	0	6.9862E-07	4	4608	4608;4620;4631;4644		150.81	86.603	1	425100			37593	1269	25051	25063	42811;42812;42813;42814	42811					0.030930759523016604
NEVSKIVQTY	10	Unmodified	_NEVSKIVQTY_					0	0	0		nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814|ACTN1;ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	nc|ENSG00000072110|P12814-2|ACTN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8143310546875	2	590.814053	1179.61355	-1.7366	-0.001026	1.4655	0.00086583	-0.27109	-0.00016016	590.8149061697092	52.316	0.86106	52.329	51.965	52.826	0.012436					41	19	3	0	0	0	5.7301E-11	4	4546	4546;4558;4569;4581		157.34	89.851	1	531680			37594	1269	25051	25063	42815;42816;42817;42818	42815					0.030930759523016604
NEVSVKHTLKL	11	Unmodified	_NEVSVKHTLKL_					0	0	0		ENSG00000138686|ENST00000264499|BBS7;nc|ENSG00000138686|Q8IWZ6-2|BBS7	ENSG00000138686|ENST00000264499|BBS7	ENSG00000138686|ENST00000264499|BBS7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3809814453125	2	634.372069	1266.72959	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.06	1	112.09	111.59	112.59	0.032707								0	0	0	0.56276	1	13595	13595		23.523	1.5628	1				37595	4318	25052	25064	42819	42819					0.10689019522988019
NEVTSRMDLI	10	Unmodified	_NEVTSRMDLI_					0	0	0		ENSG00000129292|ENST00000395386|PHF20L1;ENST00000477051.1_1_8:133854703-133858165:+|nuORF	ENSG00000129292|ENST00000395386|PHF20L1	ENSG00000129292|ENST00000395386|PHF20L1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3016357421875	2	589.297713	1176.58087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.701	1	54.792	54.292	55.292	0.091167								0	0	0	0.45132	1	4540	4540		52.937	8.5595	1				37596	3581	25053	25065	42820	42820					-0.00035454442217996984
NEVTTEIRF	9	Unmodified	_NEVTTEIRF_					0	0	0		nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238252944-238263658:-|nuORF	nc|ENSG00000163359|P12111-4|COL6A3	nc|ENSG00000163359|P12111-4|COL6A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.7841186523438	2	554.785296	1107.55604	-0.81751	-0.00045354	0.66845	0.00037085	-0.14906	-8.2698E-05	554.7857639593342	57.552	0.57157	57.539	57.272	57.843	-0.013641					54	22	3	0	0	0	0.045756	5	5194	5184;5194;5203;5214;5224		109.48	32.161	1	273210			37597	5787	25054	25066	42821;42822;42823;42824;42825	42822					0.006562337467130419
NEVTTEIRF	9	Unmodified	_NEVTTEIRF_					0	0	0		nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238252944-238263658:-|nuORF	nc|ENSG00000163359|P12111-4|COL6A3	nc|ENSG00000163359|P12111-4|COL6A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7855224609375	2	554.785296	1107.55604	0.3699	0.00020521	-0.34367	-0.00019066	0.02623	1.4552E-05	554.7851771828723	57.541	0.69741	57.511	57.197	57.895	-0.029861					46	21	3	0	0	0	0.018862	4	5308	5300;5308;5316;5327		126.24	48.925	1	386890			37598	5787	25054	25066	42826;42827;42828;42829	42827					0.006562337467130419
NEVTTEIRF	9	Unmodified	_NEVTTEIRF_					0	0	0		nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238252944-238263658:-|nuORF	nc|ENSG00000163359|P12111-4|COL6A3	nc|ENSG00000163359|P12111-4|COL6A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.7852172851562	2	554.785296	1107.55604	-0.20121	-0.00011163	0.060855	3.3761E-05	-0.14035	-7.7864E-05	554.7853454906583	57.513	0.7596	57.547	57.273	58.032	0.033905					48	23	3	0	0	0	0.019577	4	5229	5213;5229;5237;5248		125.71	42.962	1	282480			37599	5787	25054	25066	42830;42831;42832;42833	42831					0.006562337467130419
NEVVAGIKEY	10	Unmodified	_NEVVAGIKEY_					0	0	0		ENSG00000123562|ENST00000441076|MORF4L2;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;ENST00000560710.1_1_15:79184565-79186592:+|nuORF;ENST00000447135.2_1_4:174537089-174537971:-|nuORF;ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENSG00000123562|ENST00000441076|MORF4L2;ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENSG00000123562|ENST00000441076|MORF4L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.2970581054688	2	561.295496	1120.57644	-0.9878	-0.00055445	0.65951	0.00037018	-0.32829	-0.00018427	561.2955963878425	48.489	0.52315	48.483	48.214	48.737	-0.0056419					25	11	3	0	0	0	0.27092	1	4013	4013		75.652	29.7	1	171660			37600	3279;13247	25055	25067	42834	42834					0.02097404406526948
NEVVAGIKEY	10	Unmodified	_NEVVAGIKEY_					0	0	0		ENSG00000123562|ENST00000441076|MORF4L2;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;ENST00000560710.1_1_15:79184565-79186592:+|nuORF;ENST00000447135.2_1_4:174537089-174537971:-|nuORF;ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENSG00000123562|ENST00000441076|MORF4L2;ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENSG00000123562|ENST00000441076|MORF4L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	561.2957763671875	2	561.295496	1120.57644	-0.4181	-0.00023468	-0.012093	-6.7877E-06	-0.43019	-0.00024146	561.2953715922876	48.36	0.56492	48.334	48.097	48.661	-0.025112					26	12	3	0	0	0	0.088457	2	4096	4082;4096		102.95	35.993	1	195860			37601	3279;13247	25055	25067	42835;42836	42836					0.02097404406526948
NEVVAGIKEY	10	Unmodified	_NEVVAGIKEY_					0	0	0		ENSG00000123562|ENST00000441076|MORF4L2;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;ENST00000560710.1_1_15:79184565-79186592:+|nuORF;ENST00000447135.2_1_4:174537089-174537971:-|nuORF;ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENSG00000123562|ENST00000441076|MORF4L2;ENST00000525966.1_1_11:14695245-14695548:-|nuORF	ENSG00000123562|ENST00000441076|MORF4L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.295654296875	2	561.295496	1120.57644	0.56791	0.00031877	-0.84781	-0.00047587	-0.2799	-0.00015711	561.2949524661569	48.471	0.64801	48.472	48.189	48.837	0.00016785					27	14	3	0	0	0	0.2855	2	4044	4032;4044		73.841	24.888	1	183840			37602	3279;13247	25055	25067	42837;42838	42838					0.02097404406526948
NEWKVFAR	8	Unmodified	_NEWKVFAR_					0	0	0			REV__ENSG00000172575|ENST00000310803|RASGRP1	REV__ENSG00000172575|ENST00000310803|RASGRP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.28173828125	2	525.279983	1048.54541	2.2932	0.0012045	1.4234	0.00074767	3.7165	0.0019522	525.7828838358329	24.907	0.30985	24.393	24.19	24.499	-0.51365					8	6	2	0	0	0	0.4196	1	1258	1258		19.997	0	1	23638	+		37603	21842	25056	25068	42839	42839					0.023082958829490963
NEWVLLNL	8	Unmodified	_NEWVLLNL_					0	0	0		ENSG00000166825|ENST00000300060|ANPEP	ENSG00000166825|ENST00000300060|ANPEP	ENSG00000166825|ENST00000300060|ANPEP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.77423095703125	2	500.776742	999.538931	0.35117	0.00017586	-4.4542	-0.0022306	-4.103	-0.0020547	500.77440458512547	50.648	0.53051	50.698	50.372	50.903	0.049896					40	17	3	0	0	0	0.90837	1	3986	3986		56.721	1.9447	1	218880			37604	6234	25057	25069	42840	42840					0.03914357931569157
NEWWFWDGDR	10	Unmodified	_NEWWFWDGDR_					0	0	0			REV__nc|ENSG00000115705|P07202-8|TPO	REV__nc|ENSG00000115705|P07202-8|TPO	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.8702392578125	3	470.866909	1409.5789	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.61	1	107.73	107.23	108.23	0.11715								0	0	0	0.45132	1	13159	13159		24.232	4.2013	1		+		37605	18145	25058	25070	42841	42841					-0.10950747135825623
NEYFFDRNR	9	Unmodified	_NEYFFDRNR_					0	0	0		ENSG00000182255|ENST00000328224|KCNA4;nc|ENSG00000177301|P16389-2|KCNA2;ENSG00000177301|ENST00000316361|KCNA2;ENSG00000143105|ENST00000369771|KCNA10;ENSG00000177272|ENST00000369769|KCNA3;ENSG00000130037|ENST00000252321|KCNA5;nc|ENSG00000151079|P17658|KCNA6;ENSG00000111262|ENST00000382545|KCNA1	ENSG00000182255|ENST00000328224|KCNA4;nc|ENSG00000151079|P17658|KCNA6;ENSG00000111262|ENST00000382545|KCNA1	ENSG00000182255|ENST00000328224|KCNA4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7550964355469	3	420.863388	1259.56833	1.1149	0.00046922	-3.9508	-0.0016627	-2.8359	-0.0011935	420.86161868108655	22.612	0.80049	22.194	21.924	22.725	-0.41879					21	18	2	0	0	0	0.20789	1	906	906		12.207	0	1	101740			37606	7440;14989;2566	25059	25071	42842	42842					-0.05106729790236386
NEYPSRVAF	9	Unmodified	_NEYPSRVAF_					0	0	0		nc|ENSG00000106636|O15498-2|YKT6;ENST00000447123.5_1_7:44240734-44251164:+|nuORF;ENSG00000106636|ENST00000223369|YKT6	nc|ENSG00000106636|O15498-2|YKT6	nc|ENSG00000106636|O15498-2|YKT6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	541.7659912109375	2	541.766906	1081.51926	-1.2683	-0.00068713	0.90486	0.00049022	-0.36346	-0.00019691	541.7673879234059	50.314	0.60478	50.314	49.971	50.576	0					24	14	2	0	0	0	0.68711	1	4005	4005		41.427	3.6151	1	87882			37607	2309	25060	25072	42843	42843					-0.018240180791963212
NFAMWLQGWWW	11	Unmodified	_NFAMWLQGWWW_					0	0	0		nc|ENSG00000164808|Q14159-3|SPIDR	nc|ENSG00000164808|Q14159-3|SPIDR	nc|ENSG00000164808|Q14159-3|SPIDR	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.8974304199219	3	508.900897	1523.68086	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.89	1	119.8	119.3	120.3	-0.088509								0	0	0	0.56276	1	12956	12956		10.587	1.7875	1				37608	15064	25061	25073	42844	42844					-0.06003172317764438
NFDEAIITLN	10	Unmodified	_NFDEAIITLN_					0	0	0			REV__L1M4_dup6020|chr5:141114522-141116487:+|3.0372164577870437|0.2312685431788466|3.72|63.0|71|3|sense	REV__L1M4_dup6020|chr5:141114522-141116487:+|3.0372164577870437|0.2312685431788466|3.72|63.0|71|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2950439453125	2	575.292953	1148.57135	-0.40049	-0.0002304	-0.96308	-0.00055405	-1.3636	-0.00078445	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.42393	2	8667	8656;8667		62.107	3.4614	1	1396200	+		37609	29459	25062	25074	42845;42846	42846					0.003011005439020664
NFDVLDLHF	9	Unmodified	_NFDVLDLHF_					0	0	0		ENSG00000179715|ENST00000546455|PCED1B	ENSG00000179715|ENST00000546455|PCED1B	ENSG00000179715|ENST00000546455|PCED1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.2779541015625	2	560.277106	1118.53966	1.7608	0.00098652	-1.2678	-0.00071031	0.49299	0.00027621	560.2762765468837	91.655	0.89361	92.105	91.756	92.649	0.44958					38	20	2	0	0	0	0.010555	3	10878	10869;10878;10891		132.76	72.64	1	500120			37610	7290	25063	25075	42847;42848;42849	42848					-0.014868474193917791
NFDVLDLHF	9	Unmodified	_NFDVLDLHF_					0	0	0		ENSG00000179715|ENST00000546455|PCED1B	ENSG00000179715|ENST00000546455|PCED1B	ENSG00000179715|ENST00000546455|PCED1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.2767333984375	2	560.277106	1118.53966	-0.7396	-0.00041438	1.2887	0.00072205	0.54914	0.00030767	560.2777124463896	91.757	1.0252	92.22	91.849	92.874	0.46249					38	23	2	0	0	0	5.5105E-05	3	10921	10921;10930;10943		148.99	82.025	1	456630			37611	7290	25063	25075	42850;42851;42852	42850					-0.014868474193917791
NFDVSEELL	9	Unmodified	_NFDVSEELL_					0	0	0		ENSG00000174428|ENST00000472837|GTF2IRD2B;ENSG00000196275|ENST00000451013|GTF2IRD2;nc|ENSG00000196275|Q86UP8-6|GTF2IRD2	ENSG00000174428|ENST00000472837|GTF2IRD2B	ENSG00000174428|ENST00000472837|GTF2IRD2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.2557373046875	2	533.258579	1064.50261	-1.1066	-0.00059008	-3.1708	-0.0016909	-4.2774	-0.0022809	533.2565950654217	46.7	0.56307	47.623	47.395	47.958	0.92315					21	12	3	0	0	0	0.38563	1	4444	4444		58.782	2.0609	1	933970			37612	6931	25064	25076	42853	42853					-0.02706563755782554
NFGKRKPLLQ	10	Unmodified	_NFGKRKPLLQ_					0	0	0		ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;ENST00000522774.1_1_8:37728794-37730726:-|nuORF;ENST00000523182.5_1_8:37720415-37730726:-|nuORF	ENSG00000156675|ENST00000330843|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9137878417969	3	400.911902	1199.71388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.22	1	113.24	112.74	113.74	0.020027								0	0	0	0.45132	1	13681	13681		20.03	0	1				37613	5388	25065	25077	42854	42854					0.1220077779660187
NFGSYVTHE	9	Unmodified	_NFGSYVTHE_					0	0	0		ENST00000552316.1_1_12:120935833-120936010:+|nuORF;ENSG00000264364|ENST00000579991|DYNLL2;ENSG00000088986|ENST00000242577|DYNLL1	ENST00000552316.1_1_12:120935833-120936010:+|nuORF	ENST00000552316.1_1_12:120935833-120936010:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3611450195312	2	527.235439	1052.45632	1.1485	0.00060552	-1.7537	-0.00092461	-0.6052	-0.00031909	527.2344138872581	33.029	0.50523	33.24	33.019	33.524	0.21168					27	11	3	0	0	0	0.20789	1	2347	2347		49.442	21.559	1	268560			37614	1601	25066	25078	42855	42855					-0.06780583867225687
NFIKLLEVGHL	11	Unmodified	_NFIKLLEVGHL_					0	0	0			REV__ENSG00000092439|ENST00000646667|TRPM7	REV__ENSG00000092439|ENST00000646667|TRPM7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8816528320312	2	641.87953	1281.74451	1.9607	0.0012585	2.5918	0.0016636	4.5525	0.0029222	641.8810415769531	95.839	2.2822	95.782	94.474	96.756	-0.057526					187	53	4	0	0	0	0.64498	1	10310	10310		39.253	5.0803	1	1600600	+		37615	17033	25067	25079	42856	42856					0.11490511390979918
NFIRPVKG	8	Unmodified	_NFIRPVKG_					0	0	0		nc|ENSG00000140563|Q6DN12-3|MCTP2;ENST00000456504.5_1_15:94858078-95022260:+|nuORF;ENSG00000140563|ENST00000357742|MCTP2	nc|ENSG00000140563|Q6DN12-3|MCTP2	nc|ENSG00000140563|Q6DN12-3|MCTP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.79083251953125	2	465.779619	929.544686	0.27259	0.00012697	-3.4732	-0.0016177	-3.2006	-0.0014908	465.77764982986537	34.129	0.1256	34.339	34.234	34.359	0.21003					4	2	2	0	0	0	0.4196	1	2493	2493		50.025	12.996	1	47730			37616	4448	25068	25080	42857	42857					0.07709501233898663
NFKIGSLLGL	10	Unmodified	_NFKIGSLLGL_					0	0	0		ENSG00000171495|ENST00000399564|MROH2B;nc|ENSG00000171495|Q7Z745-2|MROH2B	ENSG00000171495|ENST00000399564|MROH2B	ENSG00000171495|ENST00000399564|MROH2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.31884765625	2	531.321317	1060.62808	0.78202	0.00041551	-4.4328	-0.0023553	-3.6508	-0.0019397	531.3186205937698	94.916	2.6028	95.079	94.616	97.219	0.16307					179	61	5	0	0	0	0.86218	1	9736	9736		32.812	4.7309	1	2661600			37617	6673	25069	25081	42858	42858					0.10019192891104467
NFKLSSFRK	9	Unmodified	_NFKLSSFRK_					0	0	0		ENST00000470752.5_1_2:175488218-175494412:-|nuORF	ENST00000470752.5_1_2:175488218-175494412:-|nuORF	ENST00000470752.5_1_2:175488218-175494412:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.8206787109375	2	563.822015	1125.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.297	1	29.409	28.909	29.909	0.11225								0	0	0	0.32159	1	1246	1246		23.042	3.0457	1				37618	12225	25070	25082	42859	42859					0.0716882697984147
NFLKAYIHK	9	Unmodified	_NFLKAYIHK_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3294677734375	2	567.326934	1132.63931	1.8589	0.0010546	3.176	0.0018018	5.0349	0.0028564	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.76255	1	10045	10045		35.618	8.9254	1	15439000	+		37619	23243	25071	25083	42860	42860					0.07830014985188427
NFLKLPAK	8	Unmodified	_NFLKLPAK_					0	0	0		ENSG00000140297|ENST00000396065|GCNT3	ENSG00000140297|ENST00000396065|GCNT3	ENSG00000140297|ENST00000396065|GCNT3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.2742004394531	2	465.792195	929.569838	0.26516	0.00012351	-4.3696	-0.0020353	-4.1045	-0.0019118	465.78984605107036	18.718	0.32783	18.241	18.077	18.404	-0.47694					10	6	2	0	0	0	0.4196	1	425	425		33.516	9.3128	1	77389			37620	4423	25072	25084	42861	42861					0.10223556036453374
NFLSLIVGF	9	Unmodified	_NFLSLIVGF_					0	0	0			REV__ENSG00000105929|ENST00000310018|ATP6V0A4	REV__ENSG00000105929|ENST00000310018|ATP6V0A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.29156494140625	2	505.289485	1008.56442	2.3779	0.0012015	1.554	0.00078521	3.9319	0.0019867	505.29016362201537	97.35	2.1515	97.295	96.802	98.953	-0.055542					137	49	4	0	0	0	0.77546	1	10494	10494		31.955	5.1588	1	1240400	+		37621	17582	25073	25085	42862	42862					0.06047832454009949
NFLSVNLMLTK	11	Unmodified	_NFLSVNLMLTK_					0	0	0			REV__ENST00000476824.1_1_2:182363351-182392165:+|nuORF	REV__ENST00000476824.1_1_2:182363351-182392165:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3583984375	2	640.357573	1278.70059	-0.067952	-4.3514E-05	2.0877	0.0013369	2.0198	0.0012934	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.70584	1	10565	10565		30.569	0.25114	1	640120	+		37622	18096	25074	25086	42863	42863					0.07239158902325471
NFLSVNLMLTK	11	Unmodified	_NFLSVNLMLTK_					0	0	0			REV__ENST00000476824.1_1_2:182363351-182392165:+|nuORF	REV__ENST00000476824.1_1_2:182363351-182392165:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3593139648438	2	640.357573	1278.70059	0.92817	0.00059436	1.0646	0.00068171	1.9928	0.0012761	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.55601	1	10405	10405		47.96	1.5027	1	603720	+		37623	18096	25074	25086	42864	42864					0.07239158902325471
NFNLRWRRRFV	11	Unmodified	_NFNLRWRRRFV_					0	0	0			REV__nc|ENSG00000169783|Q96FE5-2|LINGO1	REV__nc|ENSG00000169783|Q96FE5-2|LINGO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7864990234375	3	521.963771	1562.86948	0.36756	0.00019186	0.66817	0.00034876	1.0357	0.00054062	522.2981525841371	57.926	0.65183	58.48	58.228	58.88	0.55323					37	15	3	0	0	0	0.18318	1	6027	6027		6.001	0	1	380190	+		37624	21603	25075	25087	42865	42865					0.11056241370692987
NFPAVGSLPPD	11	Unmodified	_NFPAVGSLPPD_					0	0	0			REV__ENST00000439351.5_2_3:186285284-186285335:+|nuORF	REV__ENST00000439351.5_2_3:186285284-186285335:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.2753295898438	2	557.282389	1112.55022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.737	1	71.737	71.237	72.237	0								0	0	0	0.56276	1	6410	6410		47.657	12.039	1		+		37625	26730	25076	25088	42866	42866					-0.001548647649542545
NFPRLPGIL	9	Unmodified	_NFPRLPGIL_					0	0	0		ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087768554688	2	513.808377	1025.6022	-1.3833	-0.00071076	2.6514	0.0013623	1.2681	0.00065157	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.78058	1	4278	4278		30.504	4.9296	1	1148600			37626	8875	25077	25089	42867	42867					0.09042343439477918
NFPRLPGIL	9	Unmodified	_NFPRLPGIL_					0	0	0		ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8089599609375	2	513.808377	1025.6022	0.090877	4.6693E-05	1.0576	0.00054341	1.1485	0.00059011	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.7932	1	4177	4177		25.45	0	1	1448700			37627	8875	25077	25089	42868	42868					0.09042343439477918
NFPRLPGIL	9	Unmodified	_NFPRLPGIL_					0	0	0		ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.808837890625	2	513.808377	1025.6022	0.034734	1.7846E-05	1.2224	0.00062807	1.2571	0.00064592	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.7932	1	4498	4498		18.324	0.95945	1	666950			37628	8875	25077	25089	42869	42869					0.09042343439477918
NFQNVKQL	8	Unmodified	_NFQNVKQL_					0	0	0		ENST00000485741.6_1_7:72424205-72425256:-|nuORF;ENST00000473960.1_1_7:75039650-75040029:+|nuORF;ENST00000471461.5_1_7:72722316-72722787:-|nuORF;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5;ENSG00000130305|ENST00000438747|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5	ENST00000485741.6_1_7:72424205-72425256:-|nuORF	ENST00000485741.6_1_7:72424205-72425256:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7524719238281	2	495.771991	989.529429	1.0131	0.00050227	-1.5664	-0.0007766	-0.55333	-0.00027432	495.7710333354137	34.6	0.33036	34.981	34.73	35.06	0.3812					9	7	2	0	0	0	0.4196	1	2591	2591		26.796	6.3143	1	65143			37629	3634	25078	25090	42870	42870					0.03424589646044751
NFRRKRKRRAE	11	Unmodified	_NFRRKRKRRAE_					0	0	0		ENSG00000186766|ENST00000388920|FOXI2	ENSG00000186766|ENST00000388920|FOXI2	ENSG00000186766|ENST00000388920|FOXI2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.3090515136719	3	506.306308	1515.89709	0.15851	8.0253E-05	4.2742	0.0021641	4.4327	0.0022443	506.30840914621234	112.82	1.5817	112.85	112.76	114.34	0.028854					69	42	2	0	0	0	0.81892	1	12364	12364		8.0344	1.7135	1	854380			37630	7816	25079	25091	42871	42871					0.15978144630958013
NFRRRHKKP	9	Unmodified	_NFRRRHKKP_					0	0	0			REV__ENST00000510740.1_1_5:36668711-36725248:-|nuORF	REV__ENST00000510740.1_1_5:36668711-36725248:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.86962890625	2	619.870697	1237.72684	1.7162	0.0010638	-3.5015	-0.0021705	-1.7853	-0.0011067	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.7932	1	11616	11616		23.042	1.3567	1	4719500	+		37631	27959	25080	25092	42872	42872					0.11748653699351053
NFRSHPWLF	9	Unmodified	_NFRSHPWLF_					0	0	0		ENSG00000189030|ENST00000339922|VHLL	ENSG00000189030|ENST00000339922|VHLL	ENSG00000189030|ENST00000339922|VHLL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	602.3041381835938	2	602.306532	1202.59851	-0.51181	-0.00030827	-3.8308	-0.0023073	-4.3426	-0.0026156	602.3040637313559	75.099	0.87683	75.145	74.796	75.673	0.045952					76	26	4	0	0	0	0.58668	1	7249	7249		47.657	1.6851	1	1225700			37632	7981	25081	25093	42873	42873					0.005316736655913701
NFSKRLTKLS	10	Unmodified	_NFSKRLTKLS_					0	0	0			REV__ENSG00000170677|ENST00000397942|SOCS6	REV__ENSG00000170677|ENST00000397942|SOCS6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3564453125	2	597.35368	1192.69281	1.5032	0.00089792	2.5027	0.001495	4.0059	0.0023929	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.85981	1	11019	11019		35.152	4.8343	1	1501500	+		37633	21680	25082	25094	42874	42874					0.10416767697074647
NFSKTKSLYR	10	Unmodified	_NFSKTKSLYR_					0	0	0		ENSG00000186094|ENST00000371839|AGBL4;nc|ENSG00000186094|Q5VU57-2|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3460083007812	2	622.343312	1242.67207	0.74038	0.00046077	4.337	0.0026991	5.0774	0.0031599	622.3461915832663	95.989	2.2851	96.036	95.209	97.494	0.046989					118	53	3	0	0	0	0.86348	1	10136	10136		31.53	2.3803	1	363580			37634	7772	25083	25095	42875	42875					0.0604417731740341
NFSLVLCKKVE	11	Unmodified	_NFSLVLCKKVE_					0	0	0		ENST00000456643.5_2_9:75766783-75769137:+|nuORF;ENST00000257497.10_1_9:75766783-75773620:+|nuORF	ENST00000456643.5_2_9:75766783-75769137:+|nuORF	ENST00000456643.5_2_9:75766783-75769137:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3590698242188	2	640.357573	1278.70059	-0.067952	-4.3514E-05	2.0877	0.0013369	2.0198	0.0012934	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.74022	1	10614	10614		24.232	0.70912	1	640120			37635	9353	25084	25096	42876	42876					0.07239158902302734
NFSQDPDVHLK	11	Unmodified	_NFSQDPDVHLK_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.8812255859375	3	433.882448	1298.62551	-0.33363	-0.00014475	1.4948	0.00064857	1.1612	0.00050381	433.88289887850823	32.569	0.73799	32.515	32.198	32.936	-0.05434					37	16	3	0	0	0	0.70278	1	1917	1917		31.068	1.5174	1	240620			37636	1239	25085	25097	42877	42877					-0.011853073045358542
NFSRFHGDSVC	11	Unmodified	_NFSRFHGDSVC_					0	0	0		ENST00000557196.1_1_14:45356671-45356932:-|nuORF	ENST00000557196.1_1_14:45356671-45356932:-|nuORF	ENST00000557196.1_1_14:45356671-45356932:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.7772216796875	2	634.777479	1267.5404	-0.70053	-0.00044468	0.80035	0.00050804	0.099818	6.3362E-05	634.7779069574395	50.185	1.0969	50.162	49.456	50.553	-0.02343					52	24	3	0	0	0	0.65746	1	4322	4322		37.812	0	1	158060			37637	13764	25086	25098	42878	42878					-0.08266376041979129
NFTFTINA	8	Unmodified	_NFTFTINA_					0	0	0			REV__nc|ENSG00000101384|P78504-2|JAG1	REV__nc|ENSG00000101384|P78504-2|JAG1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7906188964844	2	464.232168	926.449782	-0.65467	-0.00030392	1.386	0.0006434	0.73128	0.00033948	464.23339302250287	35.284	0.42484	35.227	35.001	35.426	-0.056385					14	9	2	0	0	0	0.4196	1	2283	2283		51.335	7.2187	1	57602	+		37638	17275	25087	25099	42879	42879					-0.016384770279614713
NFTKSMEED	9	Unmodified	_NFTKSMEED_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.7330322265625	2	550.731871	1099.44919	-0.375	-0.00020652	2.2888	0.0012605	1.9138	0.001054	550.7328066614225	25.621	0.68167	25.364	25.087	25.769	-0.2572					49	15	5	0	0	0	0.73802	1	1344	1344		37.812	0.65241	1	339380			37639	8866	25088	25100	42880	42880					-0.09655684529957398
NFVAKSGRG	9	Unmodified	_NFVAKSGRG_					0	0	0			REV__ENST00000233838.8_1_2:85776903-85776951:-|nuORF	REV__ENST00000233838.8_1_2:85776903-85776951:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.25543212890625	2	468.256508	934.498464	-1.5153	-0.00070955	-2.1681	-0.0010152	-3.6834	-0.0017248	468.2553507419965	82.534	3.6867	82.66	80.393	84.08	0.12601					150	88	2	0	0	0	0.77696	1	7803	7803		31.53	1.0262	1	169950	+		37640	24207	25089	25101	42881	42881					0.028594363318120486
NFWKRYLQK	9	Unmodified	_NFWKRYLQK_					0	0	0		ENST00000402170.5_1_2:9983670-10008796:+|nuORF;nc|ENSG00000115750|Q53T94-2|TAF1B;ENSG00000115750|ENST00000263663|TAF1B	ENST00000402170.5_1_2:9983670-10008796:+|nuORF	ENST00000402170.5_1_2:9983670-10008796:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8557739257812	2	641.85639	1281.69823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.1	1	117.04	116.54	117.54	-0.064972								0	0	0	0.34024	1	14010	14010		17.365	1.7232	1				37641	2869	25090	25102	42882	42882					0.06864491279543472
NFYDASLGTF	10	Unmodified	_NFYDASLGTF_					0	0	0		ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3624877929688	2	567.758746	1133.50294	-1.4933	-0.00084783	-3.0035	-0.0017052	-4.4968	-0.0025531	568.2599411920029	42.319	0.72691	42.736	42.47	43.197	0.41761					37	17	4	0	0	0	0.37624	1	3729	3729		62.107	7.3427	1	576550			37642	4549	25091	25103	42883	42883					-0.05847144035965357
NGAEKKRK	8	Unmodified	_NGAEKKRK_					0	0	0		nc|ENSG00000151615|Q12837-2|POU4F2;ENSG00000151615|ENST00000281321|POU4F2	nc|ENSG00000151615|Q12837-2|POU4F2	nc|ENSG00000151615|Q12837-2|POU4F2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7776794433594	2	465.777608	929.540663	-0.69238	-0.0003225	0.76957	0.00035845	0.077191	3.5954E-05	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.88601	1	9514	9514		34.173	1.3601	1	927810			37643	5130	25092	25104	42884	42884					0.07307411740180214
NGAIAVVIN	9	Unmodified	_NGAIAVVIN_					0	0	0			REV__ENSG00000124209|ENST00000244040|RAB22A	REV__ENSG00000124209|ENST00000244040|RAB22A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7603759765625	2	435.75581	869.497067	0.28742	0.00012525	-1.3182	-0.00057442	-1.0308	-0.00044918	435.7551379688414	87.847	0.78127	88.296	87.893	88.674	0.44893					40	18	3	0	0	0	0.20789	1	10270	10270		6.3127	0	1	320380	+		37644	18570	25093	25105	42885	42885					0.0570980224304094
NGALSLNRL	9	Unmodified	_NGALSLNRL_					0	0	0			REV__ENSG00000184709|ENST00000371542|LRRC26	REV__ENSG00000184709|ENST00000371542|LRRC26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2778625488281	2	479.277441	956.540328	-1.6825	-0.00080636	2.3683	0.0011351	0.68584	0.00032871	479.27847474048673	97.333	1.1091	97.535	97.052	98.161	0.20206					56	25	3	0	0	0	0.76764	1	10030	10030		34.173	3.6689	1	515040	+		37645	22701	25094	25106	42886	42886					0.06031992020314192
NGAQFFLH	8	Unmodified	_NGAQFFLH_					0	0	0			REV__ENST00000524181.5_1_8:144124611-144129118:+|nuORF	REV__ENST00000524181.5_1_8:144124611-144129118:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2330322265625	2	467.232502	932.450451	-0.45838	-0.00021417	1.7033	0.00079582	1.2449	0.00058165	467.23359025373514	64.723	2.0657	65.109	64.482	66.548	0.38615					153	52	5	0	0	0	0.9159	1	7202	7202		44.531	3.1045	1	8112800	+		37646	28154	25095	25107	42887	42887					-0.018476375882301
NGARAKLI	8	Unmodified	_NGARAKLI_					0	0	0			REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1	REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.7486267089844	2	421.763969	841.513385	-0.43602	-0.0001839	-0.90739	-0.00038271	-1.3434	-0.0005666	421.7635567964698	38.397	0.37192	38.919	38.79	39.162	0.52235					13	8	2	0	0	0	0.4196	1	3191	3191		12.207	3.9756	1	64084	+		37647	22783	25096	25108	42888	42888					0.08628928199800612
NGATRKLAL	9	Unmodified	_NGATRKLAL_					0	0	0		ENSG00000086061|ENST00000330899|DNAJA1;nc|ENSG00000086061|P31689-2|DNAJA1	ENSG00000086061|ENST00000330899|DNAJA1	ENSG00000086061|ENST00000330899|DNAJA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.287841796875	2	472.287808	942.561064	-0.91361	-0.00043149	1.3293	0.00062781	0.41567	0.00019632	472.2883987984471	99.414	1.6316	99.414	99.097	100.73	0					84	38	3	0	0	0	0.76255	1	9999	9999		35.618	5.1146	1	360760			37648	1551	25097	25109	42889	42889					0.08748582399982752
NGDIQRQPLGA	11	Unmodified	_NGDIQRQPLGA_					0	0	0			REV__ENST00000506496.1_1_5:41929805-41930057:+|nuORF	REV__ENST00000506496.1_1_5:41929805-41930057:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.8115234375	2	584.807094	1167.59963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.056	1	62.047	61.547	62.547	-0.0094147								0	0	0	0.56276	1	5753	5753		28.081	1.0342	1		+		37649	27891	25098	25110	42890	42890					0.02253843243852316
NGDLLPFKKG	10	Unmodified	_NGDLLPFKKG_					0	0	0		ENST00000472820.1_1_9:139568206-139571631:-|nuORF;ENSG00000169692|ENST00000371696|AGPAT2	ENST00000472820.1_1_9:139568206-139571631:-|nuORF	ENST00000472820.1_1_9:139568206-139571631:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.806640625	2	544.808574	1087.60259	0.026613	1.4499E-05	-3.8164	-0.0020792	-3.7898	-0.0020647	544.8064273929182	24.934	1.2168	24.992	24.613	25.83	0.058189					124	57	4	0	0	0	0.20373	1	896	896		85.161	5.4482	1	915340			37650	6517	25099	25111	42891	42891					0.06229718368649628
NGFSEKIH	8	Unmodified	_NGFSEKIH_					0	0	0		ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.23590087890625	2	466.235242	930.45593	0.045014	2.0987E-05	1.5257	0.00071135	1.5708	0.00073234	466.2356010329339	55.555	0.57989	56.124	55.824	56.404	0.56836					29	13	3	0	0	0	0.9283	1	5715	5715		49.442	1.7842	1	900420			37651	7925	25100	25112	42892	42892					-0.012079587964194616
NGFYNLLIKTP	11	Unmodified	_NGFYNLLIKTP_					0	0	0			REV__ENSG00000152952|ENST00000282903|PLOD2	REV__ENSG00000152952|ENST00000282903|PLOD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3601684570312	2	640.355888	1278.69722	1.6035	0.0010268	3.0485	0.0019521	4.652	0.0029789	640.3577368030512	99.407	2.6879	99.454	98.409	101.1	0.047531					162	62	4	0	0	0	0.7144	1	10722	10722		29.17	1.0886	1	584870	+		37652	20323	25101	25113	42893	42893					0.0690223211997818
NGGLTVLPN	9	Unmodified	_NGGLTVLPN_					0	0	0			REV__nc|ENSG00000112874|Q9BQG2-2|NUDT12	REV__nc|ENSG00000112874|Q9BQG2-2|NUDT12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7446594238281	2	442.745442	883.476331	0.39735	0.00017592	-1.8334	-0.00081175	-1.4361	-0.00063583	442.74450802650625	89.278	0.7365	89.729	89.448	90.184	0.45058					60	17	4	0	0	0	0.76853	1	10568	10568		33.922	4.7721	1	3535200	+		37653	17969	25102	25114	42894	42894					0.029932118633723803
NGGNVSHH	8	Unmodified	_NGGNVSHH_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.1856384277344	2	411.186083	820.357613	2.6341	0.0010831	-2.308	-0.00094901	0.32611	0.00013409	411.18505067762544	104.06	1.4942	104.25	103.81	105.3	0.18887					65	37	2	0	0	0	0.84341	1	12689	12689		24.203	0	1	862490	+		37654	23025	25103	25115	42895	42895					-0.05975142321619842
NGGNVSHH	8	Unmodified	_NGGNVSHH_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.1857604980469	2	411.186083	820.357613	3.4126	0.0014032	-3.8467	-0.0015817	-0.43409	-0.00017849	411.18475488021454	103.97	1.5243	104.24	103.89	105.41	0.26524					73	36	3	0	0	0	0.87479	1	12693	12693		30.504	0.18592	1	843650	+		37655	23025	25103	25115	42896	42896					-0.05975142321619842
NGGRSVVK	8	Unmodified	_NGGRSVVK_					0	0	0			REV__ENSG00000146828|ENST00000354161|SLC12A9	REV__ENSG00000146828|ENST00000354161|SLC12A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.73944091796875	2	408.737951	815.46135	-0.047648	-1.9476E-05	4.4202	0.0018067	4.3725	0.0017872	408.73963408946304	36.955	2.5653	36.931	36.681	39.246	-0.023975					119	58	3	0	0	0	0.86677	1	2484	2484		27.882	5.9224	1	457600	+		37656	20034	25104	25116	42897	42897					0.04623764786049378
NGGSQIIPPY	10	Unmodified	_NGGSQIIPPY_					0	0	0			REV__ENST00000537175.1_1_12:16554488-16554707:-|nuORF	REV__ENST00000537175.1_1_12:16554488-16554707:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.2642211914062	2	523.269281	1044.52401	-0.0086692	-4.5364E-06	0.64195	0.00033591	0.63328	0.00033138	523.2695463937893	69.782	0.61782	69.818	69.495	70.113	0.035622					43	30	2	0	0	0	0.77314	1	6694	6694		40.778	0	1	1242100	+		37657	17031	25105	25117	42898	42898					0.0035286606357658457
NGHAILLATGT	11	Unmodified	_NGHAILLATGT_					0	0	0			REV__nc|ENSG00000139971|Q86TY3-2|ARMH4	REV__nc|ENSG00000139971|Q86TY3-2|ARMH4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	534.2933959960938	2	534.29583	1066.57711	-1.5022	-0.00080264	-0.67636	-0.00036137	-2.1786	-0.001164	534.295427117142	88.335	3.7823	88.504	87.046	90.828	0.16923					157	88	2	0	0	0	0.58425	1	8683	8683		45.972	4.5456	1	483520	+		37658	19584	25106	25118	42899	42899					0.04648243846236255
NGHLSLLRLSK	11	Unmodified	_NGHLSLLRLSK_					0	0	0			REV__nc|ENSG00000145147|O94813-3|SLIT2	REV__nc|ENSG00000145147|O94813-3|SLIT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.370361328125	2	619.372404	1236.73025	1.27	0.0007866	-2.1507	-0.0013321	-0.88075	-0.00054551	619.3710394706492	101.41	0.94493	101.61	101.32	102.26	0.2058					77	22	4	0	0	0	0.732	1	10612	10612		26.063	0.48933	1	2074300	+		37659	19927	25107	25119	42900	42900					0.12135858962687962
NGIALRHP	8	Unmodified	_NGIALRHP_					0	0	0		ENSG00000123219|ENST00000396679|CENPK;chr5:65554946-65561497|61|23.43|0.5|5.56|-|ENST00000514814|CENPK,CENPK	ENSG00000123219|ENST00000396679|CENPK	ENSG00000123219|ENST00000396679|CENPK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2521057128906	2	439.253769	876.492984	0.81271	0.00035698	-2.7895	-0.0012253	-1.9768	-0.00086832	439.2525507024124	90.643	2.1669	91.094	90.57	92.737	0.45058					91	51	3	0	0	0	0.88915	1	10736	10736		35.201	8.4046	1	929460			37660	452	25108	25120	42901	42901					0.049797575399907146
NGIFLRLIT	9	Unmodified	_NGIFLRLIT_					0	0	0		ENST00000361727.7_1_7:148112837-148112906:+|nuORF	ENST00000361727.7_1_7:148112837-148112906:+|nuORF	ENST00000361727.7_1_7:148112837-148112906:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8218994140625	2	523.821484	1045.62842	2.2043	0.0011546	-2.748	-0.0014395	-0.54371	-0.00028481	523.8194039189141	102.01	1.2471	102.27	101.66	102.91	0.26322					67	31	3	0	0	0	0.76255	1	12430	12430		35.618	0	1	351080			37661	10489	25109	25121	42902	42902					0.10742612610920332
NGIQEFPE	8	Unmodified	_NGIQEFPE_					0	0	0		nc|ENSG00000112851|Q96RT1-7|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-9|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.23321533203125	2	467.219257	932.423961	0.19715	9.2114E-05	3.1063	0.0014513	3.3035	0.0015435	467.22104889427266	66.97	0.10225	67.355	67.299	67.401	0.38515					5	3	2	0	0	0	0.4196	1	7319	7319		40.573	12.318	1	178470			37662	14852	25110	25122	42903	42903					-0.044953712702408666
NGIVLLLP	8	Unmodified	_NGIVLLLP_					0	0	0		nc|ENSG00000105953|Q02218-2|OGDH;ENSG00000105953|ENST00000222673|OGDH;nc|ENSG00000197444|Q9ULD0-3|OGDHL;nc|ENSG00000197444|Q9ULD0-2|OGDHL;ENSG00000197444|ENST00000374103|OGDHL	nc|ENSG00000105953|Q02218-2|OGDH;nc|ENSG00000197444|Q9ULD0-3|OGDHL	nc|ENSG00000197444|Q9ULD0-3|OGDHL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7749938964844	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.82464	1	3429	3429		21.702	1.2205	1	10266000			37663	2267;8164	25111	25123	42904	42904					0.10712464770847419
NGIYRSIM	8	Unmodified	_NGIYRSIM_					0	0	0		ENST00000295900.10_1_3:63987120-63987234:+|nuORF	ENST00000295900.10_1_3:63987120-63987234:+|nuORF	ENST00000295900.10_1_3:63987120-63987234:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.24676513671875	2	477.247295	952.480036	-0.99941	-0.00047697	-0.47414	-0.00022628	-1.4736	-0.00070325	477.24689896657776	68.408	1.3826	68.468	68.071	69.453	0.059288					117	57	3	0	0	0	0.87922	1	6123	6123		31.955	0	1	557930			37664	9724	25112	25124	42905	42905					0.0018955836559371164
NGIYRSIM	8	Unmodified	_NGIYRSIM_					0	0	0		ENST00000295900.10_1_3:63987120-63987234:+|nuORF	ENST00000295900.10_1_3:63987120-63987234:+|nuORF	ENST00000295900.10_1_3:63987120-63987234:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2474060058594	2	477.247295	952.480036	0.42784	0.00020419	-2.0067	-0.00095767	-1.5788	-0.00075348	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.89962	2	7118	7056;7118		50.025	6.8513	1	2278400			37665	9724	25112	25124	42906;42907	42907					0.0018955836559371164
NGIYRSIM	8	Unmodified	_NGIYRSIM_					0	0	0		ENST00000295900.10_1_3:63987120-63987234:+|nuORF	ENST00000295900.10_1_3:63987120-63987234:+|nuORF	ENST00000295900.10_1_3:63987120-63987234:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2467956542969	2	477.247295	952.480036	-0.88369	-0.00042174	-0.86186	-0.00041132	-1.7455	-0.00083306	477.24693641483543	64.828	2.6891	65.382	64.729	67.418	0.55386					152	75	5	0	0	0	0.89494	3	7127	7065;7110;7127		50.025	8.0096	1	2295100			37666	9724	25112	25124	42908;42909;42910	42910					0.0018955836559371164
NGKEPHFF	8	Unmodified	_NGKEPHFF_					0	0	0			REV__ENST00000551455.5_1_12:110388962-110434038:-|nuORF	REV__ENST00000551455.5_1_12:110388962-110434038:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	488.2386169433594	2	488.237784	974.461016	-0.74489	-0.00036368	2.4315	0.0011871	1.6866	0.00082346	488.2389720091914	60.599	0.73972	60.7	60.395	61.135	0.10082					93	32	4	0	0	0	0.9295	1	5235	5235		55.504	14.078	1	1383100	+		37667	19540	25113	25125	42911	42911					-0.027236549338113036
NGKGRLLRYT	10	Unmodified	_NGKGRLLRYT_					0	0	0			REV__ENST00000560567.5_1_15:64710826-64716404:+|nuORF	REV__ENST00000560567.5_1_15:64710826-64716404:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3428955078125	2	589.343646	1176.67274	0.15554	9.1664E-05	-1.2615	-0.00074348	-1.106	-0.00065182	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.8651	1	11542	11542		25.574	2.0514	1	10540000	+		37668	28764	25114	25126	42912	42912					0.09147016757128767
NGLCRQYD	8	Unmodified	_NGLCRQYD_					0	0	0			REV__chr6:116497073-116500481|25|72.68|0.47|7.27|-|2|TRAPPC3L,TRAPPC3L|1	REV__chr6:116497073-116500481|25|72.68|0.47|7.27|-|2|TRAPPC3L,TRAPPC3L|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7184143066406	2	484.716359	967.418164	1.6171	0.00078385	2.2868	0.0011084	3.9039	0.0018923	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.90523	3	11593	11593;11760;11902		53.351	15.54	1	7541600	+		37669	15871	25115	25127	42913;42914;42915	42913					-0.06684793053557314
NGLCRQYD	8	Unmodified	_NGLCRQYD_					0	0	0			REV__chr6:116497073-116500481|25|72.68|0.47|7.27|-|2|TRAPPC3L,TRAPPC3L|1	REV__chr6:116497073-116500481|25|72.68|0.47|7.27|-|2|TRAPPC3L,TRAPPC3L|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.71875	2	484.716359	967.418164	1.7202	0.00083382	1.1811	0.00057251	2.9014	0.0014063	484.71724999015095	100.07	1.5114	100.41	100.06	101.57	0.33295					128	39	5	0	0	0	0.87922	2	12179	12107;12179		45.952	3.4775	1	10028000	+		37670	15871	25115	25127	42916;42917	42917					-0.06684793053557314
NGLCRQYD	8	Unmodified	_NGLCRQYD_					0	0	0			REV__chr6:116497073-116500481|25|72.68|0.47|7.27|-|2|TRAPPC3L,TRAPPC3L|1	REV__chr6:116497073-116500481|25|72.68|0.47|7.27|-|2|TRAPPC3L,TRAPPC3L|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71795654296875	2	484.716359	967.418164	1.0671	0.00051723	2.8185	0.0013662	3.8855	0.0018834	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.90089	3	11649	11649;11720;11780		55.504	5.4797	1	7522200	+		37671	15871	25115	25127	42918;42919;42920	42918					-0.06684793053557314
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.23345947265625	2	467.232176	932.449799	-0.11758	-5.4936E-05	2.8525	0.0013328	2.7349	0.0012778	467.2333042677725	68.306	1.2873	68.328	67.991	69.278	0.021599					130	57	3	0	0	0	0.44421	1	6454	6454		54.776	10.399	1	1529800			37672	6162	25116	25128	42921	42921					-0.019128002996012583
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.2332763671875	2	467.232176	932.449799	-0.63925	-0.00029868	3.0202	0.0014112	2.381	0.0011125	467.2335443561671	68.394	1.2899	68.358	67.994	69.284	-0.036301					131	48	4	0	0	0	0.51592	2	6598	6598;6615		51.193	10.415	1	1309700			37673	6162	25116	25128	42922;42923	42922					-0.019128002996012583
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.234375	2	467.232176	932.449799	-0.78556	-0.00036704	3.411	0.0015937	2.6254	0.0012267	467.2336097851308	69.799	1.6914	69.762	69.451	71.142	-0.036964					147	87	2	0	0	0	0.6204	1	6767	6767		45.972	0.020292	1	4050000			37674	6162	25116	25128	42924	42924					-0.019128002996012583
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.233154296875	2	467.232176	932.449799	-1.043	-0.00048731	3.6725	0.0017159	2.6295	0.0012286	467.23370254393717	68.31	1.3377	68.343	68.023	69.361	0.033005					128	53	3	0	0	0	0.6204	1	6517	6517		45.972	5.1941	1	1288900			37675	6162	25116	25128	42925	42925					-0.019128002996012583
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.233642578125	2	467.232176	932.449799	-1.0422	-0.00048693	3.5338	0.0016511	2.4916	0.0011642	467.23380164983837	67.827	1.4777	67.962	67.582	69.06	0.13521					154	58	4	0	0	0	0.48102	5	6046	6046;6054;6077;6086;6120		52.937	10.072	1	2802800			37676	6162	25116	25128	42926;42927;42928;42929;42930	42926					-0.019128002996012583
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.2331848144531	2	467.232176	932.449799	-1.0397	-0.00048579	3.5395	0.0016538	2.4998	0.001168	467.23372611150774	69.413	2.1998	69.548	69.082	71.282	0.13522					162	104	3	0	0	0	0.6204	2	6271	6271;6279		45.972	1.8554	1	8546900			37677	6162	25116	25128	42931;42932	42931					-0.019128002996012583
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.23345947265625	2	467.232176	932.449799	0.4755	0.00022217	2.0541	0.00095974	2.5296	0.0011819	467.23311313074316	67.929	1.2916	68.056	67.71	69.002	0.12748					151	49	4	0	0	0	0.73802	1	6109	6109		37.812	2.6108	1	2838000			37678	6162	25116	25128	42933	42933					-0.019128002996012583
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.2332763671875	2	467.232176	932.449799	0.48872	0.00022835	2.1523	0.0010056	2.6411	0.001234	467.2330448389886	69.415	1.8077	69.544	68.979	70.786	0.1291					180	87	3	0	0	0	0.44421	2	6280	6280;6289		54.776	12.38	1	9201900			37679	6162	25116	25128	42934;42935	42934					-0.019128002996012583
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.2333984375	2	467.232176	932.449799	-1.0177	-0.00047551	3.4534	0.0016135	2.4357	0.001138	467.2337824408168	68.11	1.4648	68.17	67.783	69.248	0.059288					157	61	4	0	0	0	0.44421	3	6088	6066;6088;6102		54.776	10.399	1	2841300			37680	6162	25116	25128	42936;42937;42938	42937					-0.019128002996012583
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.2326354980469	2	467.232176	932.449799	-1.0713	-0.00050052	2.8265	0.0013206	1.7553	0.00082011	467.2337815717814	69.637	1.4406	69.703	69.254	70.695	0.065506					156	70	4	0	0	0	0.41566	1	6306	6306		56.721	3.7844	1	9146400			37681	6162	25116	25128	42939	42939					-0.019128002996012583
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2332763671875	2	467.232176	932.449799	-0.45838	-0.00021417	2.4009	0.0011218	1.9425	0.00090762	467.23359025373514	64.723	2.0657	65.109	64.482	66.548	0.38615					153	52	5	0	0	0	0.41566	4	6984	6984;7019;7031;7055		56.721	10.66	1	8112800			37682	6162	25116	25128	42940;42941;42942;42943	42940					-0.019128002996012583
NGLCVNTRG	9	Unmodified	_NGLCVNTRG_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.23345947265625	2	467.232176	932.449799	-0.26264	-0.00012271	2.1638	0.001011	1.9012	0.00088829	467.23346633413524	64.606	2.155	65.159	64.517	66.672	0.55386					169	56	5	0	0	0	0.58668	3	7021	6962;7021;7042		47.657	7.0847	1	8508300			37683	6162	25116	25128	42944;42945;42946	42945					-0.019128002996012583
NGLEILPSLLR	11	Unmodified	_NGLEILPSLLR_					0	0	0		ENST00000551176.1_1_12:56482614-56482743:+|nuORF	ENST00000551176.1_1_12:56482614-56482743:+|nuORF	ENST00000551176.1_1_12:56482614-56482743:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.9156799316406	3	408.915201	1223.72377	0.12958	5.2985E-05	1.6851	0.00068907	1.8147	0.00074206	408.91564763308895	18.275	0.41199	17.654	17.447	17.859	-0.62141					20	8	3	0	0	0	0.75121	1	381	381		21.78	0.094677	1	229150			37684	13667	25117	25129	42947	42947					0.12085921011316714
NGLLSHYM	8	Unmodified	_NGLLSHYM_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7252502441406	2	467.726195	933.437837	-0.42719	-0.00019981	-1.025	-0.00047944	-1.4522	-0.00067925	467.7255891805631	62.298	1.2977	62.853	62.3	63.598	0.55449					73	29	4	0	0	0	0.91005	1	6665	6665		42.474	4.6629	1	594040	+		37685	18645	25118	25130	42948	42948					-0.03154417042787827
NGLLTRSVAP	10	Unmodified	_NGLLTRSVAP_					0	0	0			REV__nc|ENSG00000005238|Q7L5A3-3|ATOSB	REV__nc|ENSG00000005238|Q7L5A3-3|ATOSB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.2977294921875	2	514.298373	1026.58219	1.7005	0.00087455	-2.095	-0.0010774	-0.39449	-0.00020289	514.2973799295468	96.149	2.8762	96.57	95.624	98.5	0.42051					114	69	3	0	0	0	0.86218	1	11515	11515		32.812	0	1	549770	+		37686	16081	25119	25131	42949	42949					0.06996547708831713
NGLMTKLK	8	Unmodified	_NGLMTKLK_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-10|DST	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.7685241699219	2	452.767863	903.521173	-1.6999	-0.00076965	3.2319	0.0014633	1.532	0.00069366	452.76922459739603	29.888	2.1263	29.917	28.5	30.627	0.028618					94	48	4	0	0	0	0.89494	1	1904	1904		37.159	4.3467	1	831070			37687	5149	25120	25132	42950	42950					0.065553194050608
NGLMTKLK	8	Unmodified	_NGLMTKLK_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-10|DST	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.7683410644531	2	452.767863	903.521173	0.29423	0.00013322	1.2543	0.0005679	1.5485	0.00070112	452.76829397496084	30.028	2.0344	29.938	28.887	30.921	-0.089544					86	46	3	0	0	0	0.87922	1	1946	1946		31.955	3.7006	1	1023800			37688	5149	25120	25132	42951	42951					0.065553194050608
NGLRMSIY	8	Unmodified	_NGLRMSIY_					0	0	0		nc|ENSG00000152595|Q9NQ76-2|MEPE;ENSG00000152595|ENST00000361056|MEPE	nc|ENSG00000152595|Q9NQ76-2|MEPE	nc|ENSG00000152595|Q9NQ76-2|MEPE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	477.2469177246094	2	477.247295	952.480036	0.48847	0.00023312	-1.9411	-0.00092637	-1.4526	-0.00069325	477.24619345386253	68.431	1.3932	68.559	67.916	69.309	0.12839					120	53	3	0	0	0	0.91472	1	6106	6106		44.117	7.0883	1	594020			37689	5188	25121	25133	42952	42952					0.0018955836559371164
NGLRMSIY	8	Unmodified	_NGLRMSIY_					0	0	0		nc|ENSG00000152595|Q9NQ76-2|MEPE;ENSG00000152595|ENST00000361056|MEPE	nc|ENSG00000152595|Q9NQ76-2|MEPE	nc|ENSG00000152595|Q9NQ76-2|MEPE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.2467346191406	2	477.247295	952.480036	-0.99941	-0.00047697	-0.47414	-0.00022628	-1.4736	-0.00070325	477.24689896657776	68.408	1.3826	68.468	68.071	69.453	0.059288					117	57	3	0	0	0	0.89494	1	6134	6134		37.159	1.9584	1	557930			37690	5188	25121	25133	42953	42953					0.0018955836559371164
NGLRMSIY	8	Unmodified	_NGLRMSIY_					0	0	0		nc|ENSG00000152595|Q9NQ76-2|MEPE;ENSG00000152595|ENST00000361056|MEPE	nc|ENSG00000152595|Q9NQ76-2|MEPE	nc|ENSG00000152595|Q9NQ76-2|MEPE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.24658203125	2	477.247295	952.480036	-0.88369	-0.00042174	-0.86186	-0.00041132	-1.7455	-0.00083306	477.24693641483543	64.828	2.6891	65.382	64.729	67.418	0.55386					152	75	5	0	0	0	0.92457	1	7031	7031		47.916	7.343	1	2295100			37691	5188	25121	25133	42954	42954					0.0018955836559371164
NGLVQSQST	9	Unmodified	_NGLVQSQST_					0	0	0			REV__ENST00000478357.1_1_10:81036939-81053539:+|nuORF	REV__ENST00000478357.1_1_10:81036939-81053539:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.2331237792969	2	467.235439	932.456324	-1.3963	-0.0006524	-2.8365	-0.0013253	-4.2328	-0.0019777	467.23387854623877	68.403	0.92169	68.403	68.094	69.016	0					94	38	3	0	0	0	0.76764	1	6092	6092		34.173	0.25091	1	339590	+		37692	17697	25122	25134	42955	42955					-0.012605838672243408
NGLVTLVH	8	Unmodified	_NGLVTLVH_					0	0	0			REV__ENSG00000176555|ENST00000319988|OR4S1	REV__ENSG00000176555|ENST00000319988|OR4S1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	427.3031005859375	2	426.750527	851.486502	-1.7271	-0.00073705	1.4504	0.00061898	-0.27668	-0.00011807	426.75053408117924	70.532	1.0781	70.667	70.311	71.389	0.13506					79	50	2	0	0	0	0.4196	1	6375	6375		46.766	13.251	1	308690	+		37693	22135	25123	25135	42956	42956					0.054818195886127796
NGMLIKKT	8	Unmodified	_NGMLIKKT_					0	0	0			REV__ENST00000578529.5_1_18:214628-260326:-|nuORF	REV__ENST00000578529.5_1_18:214628-260326:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.76995849609375	2	452.767863	903.521173	-2.0307	-0.00091944	3.8225	0.0017307	1.7918	0.00081129	452.7693705732477	29.816	0.72486	29.816	29.483	30.208	0					42	24	2	0	0	0	0.8537	1	1317	1317		25.574	0.12388	1	85883	+		37694	16777	25124	25136	42957	42957					0.06555319405072169
NGNEEDKY	8	Unmodified	_NGNEEDKY_					0	0	0			REV__ENSG00000107863|ENST00000396432|ARHGAP21	REV__ENSG00000107863|ENST00000396432|ARHGAP21	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71875	2	484.701429	967.388304	1.7938	0.00086944	1.78	0.00086274	3.5737	0.0017322	484.70170138712695	100.15	0.23039	100.49	100.34	100.57	0.34591					9	5	2	0	0	0	0.4196	1	12151	12151		58.782	9.3404	1	52451	+		37695	17680	25125	25137	42958	42958					-0.09669453517904003
NGNFISRM	8	Oxidation (M)	_NGNFISRM(Oxidation (M))_		NGNFISRM(1)		NGNFISRM(44)	0	0	1		ENST00000553612.5_1_14:81646622-81651936:-|nuORF	ENST00000553612.5_1_14:81646622-81651936:-|nuORF	ENST00000553612.5_1_14:81646622-81651936:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.7292175292969	2	477.726726	953.4389	2.2723	0.0010855	1.7818	0.00085123	4.0542	0.0019368	477.72742644162673	103.26	1.3367	103.48	103.2	104.54	0.22556					65	32	3	0	0	0	0.91472	1	12589	12589		44.117	7.0883	1	3872800			37696	13703	25126	25138	42959	42959		202			-0.03968202673877386
NGNFISRM	8	Oxidation (M)	_NGNFISRM(Oxidation (M))_		NGNFISRM(1)		NGNFISRM(56)	0	0	1		ENST00000553612.5_1_14:81646622-81651936:-|nuORF	ENST00000553612.5_1_14:81646622-81651936:-|nuORF	ENST00000553612.5_1_14:81646622-81651936:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7286071777344	2	477.726726	953.4389	-0.36178	-0.00017283	3.7954	0.0018132	3.4336	0.0016403	477.7286664031754	95.828	1.4042	96.232	95.809	97.213	0.40451					90	33	5	0	0	0	0.9295	1	11520	11520		55.504	11.387	1	7034800			37697	13703	25126	25138	42960	42960		202			-0.03968202673877386
NGNFISRM	8	Oxidation (M)	_NGNFISRM(Oxidation (M))_		NGNFISRM(1)		NGNFISRM(46)	0	0	1		ENST00000553612.5_1_14:81646622-81651936:-|nuORF	ENST00000553612.5_1_14:81646622-81651936:-|nuORF	ENST00000553612.5_1_14:81646622-81651936:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7276916503906	2	477.726726	953.4389	1.6127	0.00077041	0.28334	0.00013536	1.896	0.00090577	477.7267468236202	101.42	0.86987	101.75	101.55	102.41	0.32511					50	22	3	0	0	0	0.91977	1	12355	12355		45.952	7.1458	1	4403400			37698	13703	25126	25138	42961	42961		202			-0.03968202673877386
NGNNGATGH	9	Unmodified	_NGNNGATGH_					0	0	0		ENSG00000082196|ENST00000382065|C1QTNF3;ENST00000508434.1_1_5:34033255-34043308:-|nuORF;nc|ENSG00000082196|Q9BXJ4-2|C1QTNF3;nc|ENSG00000082196|Q9BXJ4|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.1803283691406	2	421.180998	840.347442	1.9424	0.00081809	-2.817	-0.0011865	-0.87463	-0.00036838	421.1800746062362	98.792	1.025	99.154	98.855	99.88	0.36137					50	25	3	0	0	0	0.77696	1	11929	11929		31.53	4.7337	1	772580			37699	1481	25127	25139	42962	42962					-0.0791175004684419
NGNNGATGH	9	Unmodified	_NGNNGATGH_					0	0	0		ENSG00000082196|ENST00000382065|C1QTNF3;ENST00000508434.1_1_5:34033255-34043308:-|nuORF;nc|ENSG00000082196|Q9BXJ4-2|C1QTNF3;nc|ENSG00000082196|Q9BXJ4|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.1816101074219	2	421.180998	840.347442	-1.2937	-0.00054486	0.20877	8.7929E-05	-1.0849	-0.00045693	421.18157163521545	89.45	0.49945	89.921	89.64	90.139	0.47068					32	11	4	0	0	0	0.77244	1	10597	10597		32.812	4.5581	1	817620			37700	1481	25127	25139	42963	42963					-0.0791175004684419
NGNNGATGH	9	Unmodified	_NGNNGATGH_					0	0	0		ENSG00000082196|ENST00000382065|C1QTNF3;ENST00000508434.1_1_5:34033255-34043308:-|nuORF;nc|ENSG00000082196|Q9BXJ4-2|C1QTNF3;nc|ENSG00000082196|Q9BXJ4|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.1807861328125	2	421.180998	840.347442	0.68978	0.00029052	-1.3578	-0.00057188	-0.66802	-0.00028136	421.18069951512337	95.837	0.98331	96.242	95.809	96.792	0.40451					64	23	4	0	0	0	0.64922	1	11524	11524		44.117	7.0883	1	1035400			37701	1481	25127	25139	42964	42964					-0.0791175004684419
NGNNGATGH	9	Unmodified	_NGNNGATGH_					0	0	0		ENSG00000082196|ENST00000382065|C1QTNF3;ENST00000508434.1_1_5:34033255-34043308:-|nuORF;nc|ENSG00000082196|Q9BXJ4-2|C1QTNF3;nc|ENSG00000082196|Q9BXJ4|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	421.180998	840.347442	1.2875	0.00054229	-1.0707	-0.00045097	0.2168	9.1311E-05	421.1804062619159	89.396	0.50162	89.847	89.611	90.113	0.45058	-0.037122	-0.0001582	NaN	32.812	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	777600			37702	1481	25127	25139							-0.0791175004684419
NGNTSHAH	8	Unmodified	_NGNTSHAH_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|67|1|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|67|1|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|67|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.18402099609375	2	419.18354	836.352528	0.66145	0.00027727	1.3446	0.00056364	2.0061	0.0008409	419.1832644153146	92.644	1.2902	92.803	92.369	93.659	0.15874					85	30	4	0	0	0	0.87064	1	9389	9389		29.15	0	1	854090			37703	14629	25128	25140	42965	42965					-0.07219446184240041
NGNTSHAH	8	Unmodified	_NGNTSHAH_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|67|1|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|67|1|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|67|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.18365478515625	2	419.18354	836.352528	1.8507	0.00077578	-2.2334	-0.00093622	-0.38274	-0.00016044	419.1825078402894	95.161	1.5217	95.589	94.841	96.362	0.42728					64	36	2	0	0	0	0.89494	1	11390	11390		37.159	1.9584	1	611440			37704	14629	25128	25140	42966	42966					-0.07219446184240041
NGPGIKII	8	Unmodified	_NGPGIKII_					0	0	0		ENSG00000109674|ENST00000264596|NEIL3	ENSG00000109674|ENST00000264596|NEIL3	ENSG00000109674|ENST00000264596|NEIL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.25714111328125	2	406.255446	810.496338	0.27279	0.00011082	3.6804	0.0014952	3.9532	0.001606	406.25677816056157	49.48	2.6493	49.522	48.485	51.134	0.042236					135	72	3	0	0	0	0.81548	1	3802	3802		20.482	1.1219	1	326490			37705	2474	25129	25141	42967	42967					0.08351007594001203
NGPIKALGIGP	11	Unmodified	_NGPIKALGIGP_					0	0	0			REV__ENST00000540749.1_1_12:9280730-9280835:+|nuORF	REV__ENST00000540749.1_1_12:9280730-9280835:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	518.8096923828125	2	518.811116	1035.60768	-0.22367	-0.00011604	-1.2377	-0.00064211	-1.4613	-0.00075815	518.8103495511101	98.404	1.6814	98.632	97.611	99.292	0.22787					74	38	3	0	0	0	0.68378	1	10237	10237		34.173	8.7224	1	1004100	+		37706	28470	25130	25142	42968	42968					0.09130022231261137
NGPIKALGIGP	11	Unmodified	_NGPIKALGIGP_					0	0	0			REV__ENST00000540749.1_1_12:9280730-9280835:+|nuORF	REV__ENST00000540749.1_1_12:9280730-9280835:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	518.8102416992188	2	518.811116	1035.60768	0.80153	0.00041584	-2.227	-0.0011554	-1.4255	-0.00073956	518.8097941481088	98.593	0.95907	98.75	98.276	99.235	0.15659					53	21	3	0	0	0	0.6921	1	10258	10258		32.812	0.85756	1	827950	+		37707	28470	25130	25142	42969	42969					0.09130022231261137
NGPIKALGIGP	11	Unmodified	_NGPIKALGIGP_					0	0	0			REV__ENST00000540749.1_1_12:9280730-9280835:+|nuORF	REV__ENST00000540749.1_1_12:9280730-9280835:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	518.81103515625	2	518.811116	1035.60768	0.81759	0.00042417	-2.2338	-0.0011589	-1.4162	-0.00073475	518.8098125693833	100.34	1.3535	100.5	99.984	101.34	0.15073					78	31	4	0	0	0	0.53495	1	10474	10474		49.442	1.7842	1	1621700	+		37708	28470	25130	25142	42970	42970					0.09130022231261137
NGPIKALGIGP	11	Unmodified	_NGPIKALGIGP_					0	0	0			REV__ENST00000540749.1_1_12:9280730-9280835:+|nuORF	REV__ENST00000540749.1_1_12:9280730-9280835:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.810302734375	2	518.811116	1035.60768	1.9509	0.0010121	-3.6295	-0.001883	-1.6786	-0.0008709	518.8092395464859	98.349	1.5218	98.712	98.319	99.841	0.36308					101	37	4	0	0	0	0.61774	3	11842	11842;11880;11893		42.396	5.237	1	12004000	+		37709	28470	25130	25142	42971;42972;42973	42971					0.09130022231261137
NGPIKALGIGP	11	Unmodified	_NGPIKALGIGP_					0	0	0			REV__ENST00000540749.1_1_12:9280730-9280835:+|nuORF	REV__ENST00000540749.1_1_12:9280730-9280835:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.810791015625	2	518.811116	1035.60768	2.0333	0.0010549	-3.5591	-0.0018465	-1.5258	-0.00079161	518.8092333336378	100.03	1.6601	100.36	99.811	101.47	0.33295					136	41	4	0	0	0	0.61774	1	12094	12094		42.396	1.8235	1	17274000	+		37710	28470	25130	25142	42974	42974					0.09130022231261137
NGPQACLHP	9	Unmodified	_NGPQACLHP_					0	0	0			REV__ENST00000220166.9_1_15:79214177-79214468:-|nuORF	REV__ENST00000220166.9_1_15:79214177-79214468:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7237243652344	2	468.721444	935.428335	-0.58063	-0.00027215	3.794	0.0017783	3.2134	0.0015062	468.72346030200146	77.011	2.0488	77.579	77.289	79.337	0.56836					141	50	5	0	0	0	0.78058	1	8760	8760		30.504	2.6214	1	13648000	+		37711	24151	25131	25143	42975	42975					-0.041961853283282835
NGQGQANH	8	Unmodified	_NGQGQANH_					0	0	0			REV__nc|ENSG00000100614|P35813-2|PPM1A	REV__nc|ENSG00000100614|P35813-2|PPM1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1839904785156	2	413.18354	824.352528	2.0036	0.00082786	-2.7501	-0.0011363	-0.74653	-0.00030845	413.18277054138287	99.966	1.3545	100.32	99.907	101.26	0.35072					93	33	4	0	0	0	0.86288	2	12157	12085;12157		33.516	4.366	1	6662300	+		37712	17208	25132	25144	42976;42977	42977					-0.06667446184246728
NGRIEKQL	8	Unmodified	_NGRIEKQL_					0	0	0			REV__ENSG00000102010|ENST00000348343|BMX	REV__ENSG00000102010|ENST00000348343|BMX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2774353027344	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.89494	1	9724	9724		37.159	0	1	6350300	+		37713	17318	25133	25145	42978	42978					0.06031992020314192
NGRIMSYL	8	Unmodified	_NGRIMSYL_					0	0	0			REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2486877441406	2	477.247295	952.480036	0.42784	0.00020419	-2.0067	-0.00095767	-1.5788	-0.00075348	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.884	1	7139	7139		33.516	0	1	2278400	+		37714	21050	25134	25146	42979	42979					0.0018955836558234296
NGRKAVTA	8	Unmodified	_NGRKAVTA_					0	0	0			REV__CON__P01044-1	REV__CON__P01044-1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.739501953125	2	408.737951	815.46135	0.14715	6.0146E-05	4.0233	0.0016445	4.1704	0.0017046	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.88601	1	1981	1981		34.173	8.7224	1	1448600	+	+	37715	15973	25135	25147	42980	42980					0.04623764786049378
NGRKAVTA	8	Unmodified	_NGRKAVTA_					0	0	0			REV__CON__P01044-1	REV__CON__P01044-1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.7398681640625	2	408.737951	815.46135	1.5082	0.00061648	2.9117	0.0011901	4.4199	0.0018066	408.739095634202	34.891	2.006	35.101	34.812	36.818	0.21003					151	50	4	0	0	0	0.92457	1	2744	2744		47.916	1.1492	1	5089300	+	+	37716	15973	25135	25147	42981	42981					0.04623764786049378
NGRSTEKRR	9	Unmodified	_NGRSTEKRR_					0	0	0			REV__chr10:68757377-68765888|40|30.18|0.98|4.95|+|2|CCAR1,CCAR1|3	REV__chr10:68757377-68765888|40|30.18|0.98|4.95|+|2|CCAR1,CCAR1|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3065185546875	2	552.305052	1102.59555	2.2801	0.0012593	0.27463	0.00015168	2.5547	0.001411	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.73802	1	9727	9727		37.812	3.8899	1	1797400	+		37717	15478	25136	25148	42982	42982					0.048357985408074455
NGSCSRIT	8	Unmodified	_NGSCSRIT_					0	0	0			REV__ENST00000409018.7_1_14:69707659-69707836:+|nuORF	REV__ENST00000409018.7_1_14:69707659-69707836:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.198486328125	2	419.197802	836.381051	0.099347	4.1646E-05	1.3653	0.00057232	1.4646	0.00061397	419.1982839236654	30.34	0.49046	30.453	30.246	30.737	0.11225					38	22	2	0	0	0	0.87064	1	1343	1343		29.15	2.3535	1	116800	+		37718	26328	25137	25149	42983	42983					-0.043684645993153026
NGSCSRIT	8	Unmodified	_NGSCSRIT_					0	0	0			REV__ENST00000409018.7_1_14:69707659-69707836:+|nuORF	REV__ENST00000409018.7_1_14:69707659-69707836:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	419.197802	836.381051	-0.33914	-0.00014217	8.35	0.0035003	8.0109	0.0033581	419.2021594095955	30.339	0.24742	30.292	30.099	30.347	-0.047062	-0.11991	0.0058306	NaN	29.15	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3801.5	+		37719	26328	25137	25149							-0.043684645993153026
NGSCSRIT	8	Unmodified	_NGSCSRIT_					0	0	0			REV__ENST00000409018.7_1_14:69707659-69707836:+|nuORF	REV__ENST00000409018.7_1_14:69707659-69707836:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	419.197802	836.381051	0.099347	4.1646E-05	1.3653	0.00057232	1.4646	0.00061397	419.1982839236654	30.34	0.49046	30.453	30.246	30.737	0.11225	0.040561	-2.536E-05	NaN	29.15	38	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116800	+		37720	26328	25137	25149							-0.043684645993153026
NGSCSRIT	8	Unmodified	_NGSCSRIT_					0	0	0			REV__ENST00000409018.7_1_14:69707659-69707836:+|nuORF	REV__ENST00000409018.7_1_14:69707659-69707836:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	419.197802	836.381051	0.15564	6.5242E-05	0.55851	0.00023413	0.71415	0.00029937	419.19803884260574	30.494	0.45147	30.491	30.31	30.761	-0.0022526	0.079347	-0.00070175	NaN	29.15	38	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71917	+		37721	26328	25137	25149							-0.043684645993153026
NGSGKLRLV	9	Unmodified	_NGSGKLRLV_					0	0	0			REV__ENSG00000166226|ENST00000299300|CCT2	REV__ENSG00000166226|ENST00000299300|CCT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28961181640625	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.78058	1	12731	12731		30.504	1.3541	1	3080300	+		37722	21268	25138	25150	42984	42984					0.0874858239999412
NGSHDFFKGIK	11	Unmodified	_NGSHDFFKGIK_					0	0	0		ENST00000273258.3_1_3:69154031-69154163:+|nuORF	ENST00000273258.3_1_3:69154031-69154163:+|nuORF	ENST00000273258.3_1_3:69154031-69154163:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	625.3206176757812	2	625.319837	1248.62512	1.2904	0.0008069	-0.98282	-0.00061458	0.30756	0.00019232	625.3191697784131	64.348	0.83466	64.468	64.114	64.949	0.12005					63	28	3	0	0	0	0.59499	1	5666	5666		45.022	0.64502	1	439280			37723	9576	25139	25151	42985	42985					0.010753177662763846
NGSLLIYMI	9	Unmodified	_NGSLLIYMI_					0	0	0			REV__ENST00000475665.5_1_3:49896753-49898557:-|nuORF	REV__ENST00000475665.5_1_3:49896753-49898557:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2843017578125	2	512.280803	1022.54705	-0.92106	-0.00047184	1.8014	0.00092281	0.88031	0.00045096	512.2816133607977	84.69	1.8154	84.69	83.802	85.618	0					71	41	2	0	0	0	0.76764	1	8000	8000		34.173	0	1	77833	+		37724	21024	25140	25152	42986	42986					0.03668168856700049
NGTKGTRV	8	Unmodified	_NGTKGTRV_					0	0	0		ENSG00000130701|ENST00000252998|RBBP8NL	ENSG00000130701|ENST00000252998|RBBP8NL	ENSG00000130701|ENST00000252998|RBBP8NL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.736328125	2	416.735409	831.456264	0.069639	2.9021E-05	3.4645	0.0014438	3.5341	0.0014728	416.7368250474704	38.634	0.86422	38.976	38.537	39.401	0.34187					55	20	4	0	0	0	0.88601	1	3206	3206		34.173	4.331	1	1714900			37725	3667	25141	25153	42987	42987					0.0337946092341781
NGTRLPAGK	9	Unmodified	_NGTRLPAGK_					0	0	0			REV__nc|ENSG00000148660|Q13555-7|CAMK2G	REV__nc|ENSG00000148660|Q13555-7|CAMK2G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2635498046875	2	457.264333	912.514114	-0.73369	-0.00033549	0.73239	0.0003349	-0.0013027	-5.9568E-07	457.26455633568185	79.517	3.0273	79.933	78.153	81.18	0.41621					150	71	3	0	0	0	0.73802	1	9135	9135		37.812	0.65241	1	894880	+		37726	29923	25142	25154	42988	42988					0.05435722848858404
NGTTMWRA	8	Unmodified	_NGTTMWRA_					0	0	0		ENSG00000168917|ENST00000446465|SLC35G2	ENSG00000168917|ENST00000446465|SLC35G2	ENSG00000168917|ENST00000446465|SLC35G2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72442626953125	2	468.721444	935.428335	1.3522	0.00063381	2.4637	0.0011548	3.8159	0.0017886	468.72262841523417	99.997	1.1906	100.33	99.811	101	0.33295					64	29	4	0	0	0	0.87922	1	12115	12115		31.955	1.4512	1	1305900			37727	6450	25143	25155	42989	42989					-0.04196185328316915
NGVGPNKRV	9	Unmodified	_NGVGPNKRV_					0	0	0			REV__ENSG00000101367|ENST00000375571|MAPRE1	REV__ENSG00000101367|ENST00000375571|MAPRE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.76898193359375	2	470.769783	939.525013	0.3235	0.00015229	-1.7498	-0.00082374	-1.4263	-0.00067145	470.7688399761902	50.705	1.3688	50.755	50.372	51.741	0.049896					94	42	3	0	0	0	0.47272	1	3994	3994		53.351	10.487	1	1304900	+		37728	17274	25144	25156	42990	42990					0.05283125223149909
NGVGPNKRV	9	Unmodified	_NGVGPNKRV_					0	0	0			REV__ENSG00000101367|ENST00000375571|MAPRE1	REV__ENSG00000101367|ENST00000375571|MAPRE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76910400390625	2	470.769783	939.525013	-0.31282	-0.00014727	-1.012	-0.00047641	-1.3248	-0.00062368	470.7690962660208	80.864	0.77295	81.286	80.933	81.706	0.4215					52	18	4	0	0	0	0.64922	1	9323	9323		44.117	1.7207	1	1358000	+		37729	17274	25144	25156	42991	42991					0.05283125223149909
NGVGPNKRV	9	Unmodified	_NGVGPNKRV_					0	0	0			REV__ENSG00000101367|ENST00000375571|MAPRE1	REV__ENSG00000101367|ENST00000375571|MAPRE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76983642578125	2	470.769783	939.525013	-0.47432	-0.0002233	-1.1332	-0.00053349	-1.6076	-0.00075679	470.769174492133	82.695	1.5407	83.126	82.754	84.294	0.43108					72	36	2	0	0	0	0.62081	1	9713	9713		45.952	12.436	1	1176900	+		37730	17274	25144	25156	42992	42992					0.05283125223149909
NGVGPNKRV	9	Unmodified	_NGVGPNKRV_					0	0	0			REV__ENSG00000101367|ENST00000375571|MAPRE1	REV__ENSG00000101367|ENST00000375571|MAPRE1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	470.769783	939.525013	-0.47432	-0.0002233	-1.1332	-0.00053349	-1.6076	-0.00075679	470.769174492133	82.695	1.5407	83.126	82.754	84.294	0.43108	-0.014752	-4.6314E-05	NaN	45.952	72	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1176900	+		37731	17274	25144	25156							0.05283125223149909
NGVGPNKRV	9	Unmodified	_NGVGPNKRV_					0	0	0			REV__ENSG00000101367|ENST00000375571|MAPRE1	REV__ENSG00000101367|ENST00000375571|MAPRE1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	470.769783	939.525013	-0.53495	-0.00025184	-1.0241	-0.00048211	-1.559	-0.00073395	470.7691930623529	82.682	1.7879	83.156	82.672	84.46	0.47383	0.014752	5.6444E-05	NaN	45.952	80	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	971030	+		37732	17274	25144	25156							0.05283125223149909
NGVHKLSTK	9	Unmodified	_NGVHKLSTK_					0	0	0		nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2	nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.28826904296875	2	492.285266	982.555979	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.12	1	110.19	109.69	110.69	0.073685								0	0	0	0.31437	1	11831	11831		25.574	1.3422	1				37733	15023	25145	25157	42993	42993					0.06400278537364557
NGVLKEKIVLT	11	Unmodified	_NGVLKEKIVLT_					0	0	0		chr15:41309849-41319658|48|10.52|0.13|6.37|-|0|OIP5,OIP5|2	chr15:41309849-41319658|48|10.52|0.13|6.37|-|0|OIP5,OIP5|2	chr15:41309849-41319658|48|10.52|0.13|6.37|-|0|OIP5,OIP5|2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.2366638183594	3	405.255334	1212.74417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.447	1	63.474	62.974	63.974	0.027142								0	0	0	0.56276	1	5941	5941		15.337	0	1				37734	186	25146	25158	42994	42994					0.14631091671117247
NGVLKRVSA	9	Unmodified	_NGVLKRVSA_					0	0	0		ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1	ENSG00000009694|ENST00000371130|TENM1	ENSG00000009694|ENST00000371130|TENM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2878112792969	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.7932	1	10071	10071		21.96	4.5949	1	48696000			37735	755	25147	25159	42995	42995					0.0874858239999412
NGVRGKHKH	9	Unmodified	_NGVRGKHKH_					0	0	0		ENSG00000085185|ENST00000540052|BCORL1;nc|ENSG00000085185|Q5H9F3-1|BCORL1;nc|ENSG00000085185|Q5H9F3-4|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7930908203125	2	516.794124	1031.57369	-0.27573	-0.0001425	-1.1998	-0.00062006	-1.4755	-0.00076255	516.7933490368572	86.056	2.7275	86.241	84.67	87.398	0.18523					138	63	3	0	0	0	0.78983	1	8552	8552		27.882	2.4321	1	324400			37736	1527	25148	25160	42996	42996					0.05917038582879286
NHDIAQILKSR	11	Unmodified	_NHDIAQILKSR_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	647.86474609375	2	647.864943	1293.71533	0.94459	0.00061197	0.00066231	4.2908E-07	0.94526	0.0006124	647.8646210183678	111.89	0.33094	111.95	111.76	112.09	0.069542					11	9	2	0	0	0	0.7144	1	12034	12034		29.17	0.020503	1	528560	+		37737	20128	25149	25161	42997	42997					0.08022367094713445
NHDIAQILKSR	11	Unmodified	_NHDIAQILKSR_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	647.864943	1293.71533	1.6039	0.0010391	-0.8691	-0.00056306	0.73482	0.00047607	648.366353571218	111.79	0.13693	111.9	111.81	111.94	0.11118	-0.049157	-0.0025263	NaN	29.17	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	977130	+		37738	20128	25149	25161							0.08022367094713445
NHDIAQILKSR	11	Unmodified	_NHDIAQILKSR_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	647.864943	1293.71533	-1.1413	-0.00073944	1.5777	0.0010221	0.43636	0.00028271	647.8658033503607	112.01	0.31422	111.99	111.85	112.17	-0.019882	0.043675	0.00064408	NaN	29.17	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1559900	+		37739	20128	25149	25161							0.08022367094713445
NHFDGFQAEWL	11	Unmodified	_NHFDGFQAEWL_					0	0	0			REV__nc|ENSG00000197444|Q9ULD0-3|OGDHL	REV__nc|ENSG00000197444|Q9ULD0-3|OGDHL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.26605224609375	3	455.207043	1362.5993	-1.4331	-0.00065234	-2.8763	-0.0013093	-4.3093	-0.0019616	455.2059693175929	38.935	0.46432	39.277	38.98	39.444	0.34187					15	10	2	0	0	0	0.17375	1	3195	3195		30.569	12.038	1	37611	+		37740	17584	25150	25162	42998	42998					-0.06749576475999675
NHGDKYGPER	10	Unmodified	_NHGDKYGPER_					0	0	0			REV__ENST00000466743.1_1_1:36755336-36759695:+|nuORF	REV__ENST00000466743.1_1_1:36755336-36759695:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	586.8060913085938	2	586.775793	1171.53703	0.55982	0.00032849	1.1243	0.0006597	1.6841	0.00098819	586.7764634790695	59.165	0.62727	59.134	58.863	59.49	-0.030888					25	16	2	0	0	0	0.37624	1	5568	5568		34.173	0	1	79188	+		37741	27136	25151	25163	42999	42999					-0.04187302824334438
NHGSAPNGPK	10	Unmodified	_NHGSAPNGPK_					0	0	0			REV__ENSG00000151360|ENST00000252505|ALLC	REV__ENSG00000151360|ENST00000252505|ALLC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.7423400878906	2	489.741222	977.467892	-0.36362	-0.00017808	3.6925	0.0018083	3.3288	0.0016303	489.7428451777043	78.805	0.89184	79.216	78.844	79.736	0.4106					49	20	4	0	0	0	0.82886	1	9006	9006		37.812	2.1932	1	819890	+		37742	20247	25152	25164	43000	43000					-0.021743420532402524
NHHQNVLKLP	10	Unmodified	_NHHQNVLKLP_					0	0	0		ENST00000342992.10_3_2:179563626-179566308:-|nuORF	ENST00000342992.10_3_2:179563626-179566308:-|nuORF	ENST00000342992.10_3_2:179563626-179566308:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	600.8211059570312	2	600.335821	1198.65709	-0.56726	-0.00034055	-1.8011	-0.0010813	-2.3684	-0.0014218	600.3337401441673	54.372	0.37829	54.956	54.749	55.127	0.58474					11	8	2	0	0	0	0.37624	1	5542	5542		19.104	0	1	98839			37743	10275	25153	25165	43001	43001					0.06570730240082412
NHIRQHILL	9	Unmodified	_NHIRQHILL_					0	0	0			REV__ENSG00000169981|ENST00000396056|ZNF35	REV__ENSG00000169981|ENST00000396056|ZNF35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	572.3395385742188	2	572.340907	1142.66726	0.87335	0.00049985	-1.4784	-0.00084615	-0.60505	-0.0003463	572.3395530255622	101.42	0.82366	101.56	101.29	102.11	0.14352					44	19	3	0	0	0	0.77546	1	10658	10658		31.955	0	1	286080	+		37744	21622	25154	25166	43002	43002					0.10163337965332175
NHKKTFGV	8	Unmodified	_NHKKTFGV_					0	0	0			REV__ENST00000442655.2_1_4:9032265-9032511:+|nuORF	REV__ENST00000442655.2_1_4:9032265-9032511:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.9502258300781	2	465.761426	929.5083	0.33079	0.00015407	0.9882	0.00046026	1.319	0.00061433	465.76170208993295	52.024	0.72678	52.084	51.85	52.577	0.059719					34	23	2	0	0	0	0.4196	1	4162	4162		40.573	3.5441	1	62288	+		37745	26771	25155	25167	43003	43003					0.04072624337186426
NHKYRSLNDL	10	Unmodified	_NHKYRSLNDL_					0	0	0		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF	nc|ENSG00000127616|P51532-5|SMARCA4	nc|ENSG00000127616|P51532-5|SMARCA4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.59942626953125	3	420.554554	1258.64183	1.9444	0.00081771	4.2878	0.0018033	6.2322	0.002621	420.55630000179764	24.469	1.0932	23.956	23.451	24.544	-0.51365					43	24	2	0	0	0	0.37624	1	1142	1142		59.931	16.28	1	48895			37746	3511	25156	25168	43004	43004					0.022858186522398682
NHLALQLE	8	Unmodified	_NHLALQLE_					0	0	0		ENSG00000226321|ENST00000690015|CROCC2	ENSG00000226321|ENST00000690015|CROCC2	ENSG00000226321|ENST00000690015|CROCC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	469.25958251953125	2	469.258717	936.50288	-0.28783	-0.00013506	0.62934	0.00029532	0.34151	0.00016026	469.25892183391403	25.64	0.64706	25.599	25.332	25.979	-0.04117					41	17	3	0	0	0	0.87479	1	1083	1083		30.504	2.4222	1	153890			37747	8712	25157	25169	43005	43005					0.032089007547028814
NHLFFFFLQQE	11	Unmodified	_NHLFFFFLQQE_					0	0	0			REV__ENST00000261254.7_1_12:4410574-4410667:+|nuORF	REV__ENST00000261254.7_1_12:4410574-4410667:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.5778503417969	3	490.578588	1468.71394	-0.28021	-0.00013746	2.2941	0.0011255	2.0139	0.00098799	490.5797090913325	18.039	0.75284	17.962	17.746	18.499	-0.07671					70	23	5	0	0	0	0.75779	1	248	248		20.315	6.229	1	602520	+		37748	24382	25158	25170	43006	43006					-0.0016726699402624945
NHLLIGIVCLN	11	Unmodified	_NHLLIGIVCLN_					0	0	0			REV__ENSG00000173250|ENST00000311104|GPR151	REV__ENSG00000173250|ENST00000311104|GPR151	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8463745117188	2	604.844633	1207.67471	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.312	1	96.256	95.756	96.756	-0.056381								0	0	0	0.56276	1	10322	10322		31.53	2.3598	1		+		37749	21907	25159	25171	43007	43007					0.07918309450747074
NHLLIGIVCLN	11	Unmodified	_NHLLIGIVCLN_					0	0	0			REV__ENSG00000173250|ENST00000311104|GPR151	REV__ENSG00000173250|ENST00000311104|GPR151	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.8461303710938	2	604.844633	1207.67471	-0.095899	-5.8004E-05	2.6206	0.0015851	2.5247	0.0015271	604.846117051297	96.108	3.1148	96.155	95.25	98.365	0.047707					211	72	4	0	0	0	0.64498	1	10130	10130		39.253	1.4413	1	638500	+		37750	21907	25159	25171	43008	43008					0.07918309450747074
NHLLIGIVCLN	11	Unmodified	_NHLLIGIVCLN_					0	0	0			REV__ENSG00000173250|ENST00000311104|GPR151	REV__ENSG00000173250|ENST00000311104|GPR151	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	604.844633	1207.67471	-0.26186	-0.00015838	2.8156	0.001703	2.5538	0.0015446	604.8462755020705	96.346	2.6632	96.346	95.357	98.02	0	0.029626	0.00061106	NaN	39.253	132	61	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	263320	+		37751	21907	25159	25171							0.07918309450747074
NHLLIGIVCLN	11	Unmodified	_NHLLIGIVCLN_					0	0	0			REV__ENSG00000173250|ENST00000311104|GPR151	REV__ENSG00000173250|ENST00000311104|GPR151	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	604.844633	1207.67471	1.9378	0.0011721	0.60557	0.00036628	2.5434	0.0015383	604.8448748765467	95.85	3.3906	96.27	94.701	98.092	0.42051	-0.045921	-0.0020624	NaN	39.253	179	81	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	602500	+		37752	21907	25159	25171							0.07918309450747074
NHLLIGIVCLN	11	Unmodified	_NHLLIGIVCLN_					0	0	0			REV__ENSG00000173250|ENST00000311104|GPR151	REV__ENSG00000173250|ENST00000311104|GPR151	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	604.844633	1207.67471	0.70622	0.00042715	1.8242	0.0011034	2.5304	0.0015305	604.8457042985175	96.052	2.4506	96.457	95.533	97.983	0.40451	0.14068	-0.00058824	NaN	39.253	160	59	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	574860	+		37753	21907	25159	25171							0.07918309450747074
NHMTLKIMKVA	11	Unmodified	_NHMTLKIMKVA_					0	0	0			REV__ENSG00000214029|ENST00000537226|ZNF891	REV__ENSG00000214029|ENST00000537226|ZNF891	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3692626953125	2	643.359593	1284.70463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.96	1	113.93	113.43	114.43	-0.024452								0	0	0	0.56276	1	12616	12616		33.922	6.8743	1		+		37754	23645	25160	25172	43009	43009					0.07366925124415502
NHMTLKIMKVA	11	Unmodified	_NHMTLKIMKVA_					0	0	0			REV__ENSG00000214029|ENST00000537226|ZNF891	REV__ENSG00000214029|ENST00000537226|ZNF891	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3695068359375	2	643.359593	1284.70463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.03	1	115.01	114.51	115.51	-0.02433								0	0	0	0.56276	1	12747	12747		37.812	1.3648	1		+		37755	23645	25160	25172	43010	43010					0.07366925124415502
NHMTLKIMKVA	11	Unmodified	_NHMTLKIMKVA_					0	0	0			REV__ENSG00000214029|ENST00000537226|ZNF891	REV__ENSG00000214029|ENST00000537226|ZNF891	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.3656616210938	2	643.359593	1284.70463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.33	1	115.33	114.83	115.83	-0.0021133								0	0	0	0.56276	1	13897	13897		29.17	4.0441	1		+		37756	23645	25160	25172	43011	43011					0.07366925124415502
NHQILKLF	8	Unmodified	_NHQILKLF_					0	0	0		ENST00000269503.8_1_18:70211390-70211519:-|nuORF	ENST00000269503.8_1_18:70211390-70211519:-|nuORF	ENST00000269503.8_1_18:70211390-70211519:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8006286621094	2	506.800552	1011.58655	0.2762	0.00013998	0.32684	0.00016564	0.60304	0.00030562	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.86288	1	3704	3704		26.796	2.5934	1	416790			37757	9549	25161	25173	43012	43012					0.08122056922422871
NHSNSVELV	9	Unmodified	_NHSNSVELV_					0	0	0		ENST00000242067.10_1_7:33169348-33169504:+|nuORF	ENST00000242067.10_1_7:33169348-33169504:+|nuORF	ENST00000242067.10_1_7:33169348-33169504:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7477111816406	2	499.748713	997.482873	0.048924	2.445E-05	-3.533	-0.0017656	-3.484	-0.0017411	499.74682857522964	74.518	3.0175	75.077	74.05	77.067	0.55891					154	74	3	0	0	0	0.64922	1	8562	8562		44.117	5.3107	1	1021700			37758	9251	25162	25174	43013	43013					-0.015968949759098905
NHTGPSHRIE	10	Unmodified	_NHTGPSHRIE_					0	0	0		ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENST00000401578.2_1_6:80777785-80779717:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.2833251953125	2	574.283786	1146.55302	-0.14152	-8.127E-05	3.7943	0.002179	3.6528	0.0020977	574.2859007506236	75.862	1.515	76.43	75.375	76.89	0.56835					66	36	2	0	0	0	0.63899	1	8546	8546		47.96	7.1814	1	394630			37759	11238	25163	25175	43014	43014					-0.01439596587442793
NHTIAWRL	8	Unmodified	_NHTIAWRL_					0	0	0		L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|159|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|159|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|159|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.3533630371094	2	505.780151	1009.54575	0.81642	0.00041293	-3.9965	-0.0020214	-3.1801	-0.0016084	505.77876896657637	52.258	0.82578	52.925	52.676	53.502	0.6673					40	19	3	0	0	0	0.4196	1	5248	5248		51.335	0	1	597960			37760	14679	25164	25176	43015	43015					0.04135715602797063
NHVPLSKRR	9	Unmodified	_NHVPLSKRR_					0	0	0			REV__ENSG00000214929|ENST00000344803|SPATA31D1	REV__ENSG00000214929|ENST00000344803|SPATA31D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.830078125	2	553.830706	1105.64686	1.287	0.00071279	-2.2482	-0.0012451	-0.96123	-0.00053236	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.78983	1	9266	9266		27.882	0	1	5348100	+		37761	23668	25165	25177	43016	43016					0.09826167305504896
NHVVILPG	8	Unmodified	_NHVVILPG_					0	0	0		ENSG00000160190|ENST00000352133|SLC37A1	ENSG00000160190|ENST00000352133|SLC37A1	ENSG00000160190|ENST00000352133|SLC37A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.7530822753906	2	424.75307	847.491587	0.68659	0.00029163	-1.8987	-0.00080646	-1.2121	-0.00051483	424.75214856371434	66.819	1.0126	67.204	66.547	67.559	0.38515					56	29	3	0	0	0	0.86288	1	7262	7262		26.796	7.4361	1	372660			37762	5560	25166	25178	43017	43017					0.061741234512510346
NHVVILPG	8	Unmodified	_NHVVILPG_					0	0	0		ENSG00000160190|ENST00000352133|SLC37A1	ENSG00000160190|ENST00000352133|SLC37A1	ENSG00000160190|ENST00000352133|SLC37A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.7516174316406	2	424.75307	847.491587	0.12148	5.16E-05	-1.3322	-0.00056587	-1.2107	-0.00051427	424.75237083509853	66.591	1.0467	67.142	66.525	67.572	0.55071					64	32	3	0	0	0	0.81548	1	7279	7279		20.482	1.1219	1	363930			37763	5560	25166	25178	43018	43018					0.061741234512510346
NHYIIPAL	8	Unmodified	_NHYIIPAL_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	471.2688293457031	2	470.766178	939.517802	-1.9239	-0.00090572	1.9879	0.00093583	0.06397	3.0115E-05	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.82464	1	1495	1495		21.702	0	1	93177	+		37764	23015	25167	25179	43019	43019					0.04562392622710831
NHYRAGNK	8	Unmodified	_NHYRAGNK_					0	0	0			REV__ENST00000367742.7_1_1:171562160-171562283:+|nuORF	REV__ENST00000367742.7_1_1:171562160-171562283:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.24346923828125	2	480.243932	958.473312	0.093776	4.5035E-05	-1.7522	-0.00084147	-1.6584	-0.00079644	480.2429209398555	32.615	0.74674	32.626	32.298	33.044	0.010899					34	18	3	0	0	0	0.93529	1	1861	1861		52.299	2.8576	1	131240	+		37765	25578	25168	25180	43020	43020					-0.007586184707633947
NIAEDVNKV	9	Unmodified	_NIAEDVNKV_					0	0	0			REV__ENST00000472059.5_1_17:19558694-19578882:+|nuORF	REV__ENST00000472059.5_1_17:19558694-19578882:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2909240722656	2	501.266739	1000.51892	-0.50284	-0.00025206	4.2274	0.0021191	3.7246	0.001867	501.77055079390027	85.769	0.92583	85.954	85.405	86.331	0.18523					40	21	3	0	0	0	0.20789	1	8333	8333		37.812	0	1	115160	+		37766	16642	25169	25181	43021	43021					0.01868562200957058
NIARVNLTT	9	Unmodified	_NIARVNLTT_					0	0	0		ENSG00000102837|ENST00000219022|OLFM4	ENSG00000102837|ENST00000219022|OLFM4	ENSG00000102837|ENST00000219022|OLFM4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29071044921875	2	501.290548	1000.56654	-0.86867	-0.00043546	0.96116	0.00048182	0.092492	4.6365E-05	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.77244	1	9689	9689		32.812	3.6424	1	2445400			37767	2023	25170	25182	43022	43022					0.06628261191792717
NIATMKRKAT	10	Unmodified	_NIATMKRKAT_					0	0	0		ENST00000234816.6_1_1:178838281-178840008:-|nuORF	ENST00000234816.6_1_1:178838281-178840008:-|nuORF	ENST00000234816.6_1_1:178838281-178840008:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3304443359375	2	567.326608	1132.63866	2.2465	0.0012745	3.7703	0.002139	6.0167	0.0034134	567.3287050731724	113.77	1.2385	113.79	113.12	114.36	0.020027					89	56	2	0	0	0	0.86587	1	13729	13729		29.17	1.2878	1	84963			37768	9229	25171	25183	43023	43023					0.07764852273862743
NICVQDARCNH	11	Unmodified	_NICVQDARCNH_					0	0	0			REV__nc|ENSG00000115380|Q12805-5|EFEMP1	REV__nc|ENSG00000115380|Q12805-5|EFEMP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	636.78173828125	2	636.782238	1271.54992	0.043928	2.7973E-05	2.7362	0.0017423	2.7801	0.0017703	636.7836559309865	53.854	0.65403	53.792	53.482	54.136	-0.062061					34	15	3	0	0	0	0.69248	1	4441	4441		32.751	1.2207	1	454210	+		37769	18115	25172	25184	43024	43024					-0.07498931028112565
NIDKEYLGKK	10	Unmodified	_NIDKEYLGKK_					0	0	0		ENST00000520987.1_1_8:101149771-101157363:-|nuORF;ENSG00000156509|ENST00000428847|FBXO43	ENST00000520987.1_1_8:101149771-101157363:-|nuORF	ENST00000520987.1_1_8:101149771-101157363:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.18798828125	3	403.227556	1206.66084	1.1473	0.00046264	-1.0492	-0.00042307	0.098132	3.957E-05	403.2269803432304	32.525	0.4314	32.651	32.417	32.848	0.12643					17	9	3	0	0	0	0.37624	1	2293	2293		6.3209	0	1	101570			37770	5379	25173	25185	43025	43025					0.06577355223271297
NIDMQIYKLC	10	Unmodified	_NIDMQIYKLC_					0	0	0			REV__ENST00000498873.5_1_4:120419020-120434055:+|nuORF	REV__ENST00000498873.5_1_4:120419020-120434055:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	620.8095703125	2	620.806859	1239.59917	-0.56995	-0.00035383	2.9415	0.0018261	2.3715	0.0014722	620.8089892457849	59.564	1.2818	59.955	59.441	60.723	0.39077					85	32	5	0	0	0	0.76096	1	6269	6269		41.427	0.64845	1	3018100	+		37771	27796	25174	25186	43026	43026					-0.011050357918520604
NIDNDCCFS	9	Unmodified	_NIDNDCCFS_					0	0	0			REV__ENSG00000099860|ENST00000215631|GADD45B	REV__ENSG00000099860|ENST00000215631|GADD45B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.683837890625	2	515.683867	1029.35318	0.022294	1.1497E-05	0.52588	0.00027119	0.54817	0.00028268	515.6840336135236	27.99	0.67249	27.951	27.632	28.305	-0.038523					22	14	2	0	0	0	0.7932	1	1385	1385		21.96	0	1	42475	+		37772	17111	25175	25187	43027	43027					-0.16032155641710233
NIEITVTLFK	10	Unmodified	_NIEITVTLFK_					0	0	0		ENSG00000115504|ENST00000431489|EHBP1;nc|ENSG00000115504|Q8NDI1-2|EHBP1;nc|ENSG00000115504|Q8NDI1|EHBP1;ENST00000494958.1_1_2:62934317-63053404:+|nuORF;ENST00000472809.5_1_2:62934317-62998533:+|nuORF	ENSG00000115504|ENST00000431489|EHBP1	ENSG00000115504|ENST00000431489|EHBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3424072265625	2	589.344989	1176.67542	-0.63667	-0.00037522	-2.3968	-0.0014126	-3.0335	-0.0017878	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.86348	1	11117	11117		31.53	1.2121	1	2236100			37773	2850	25176	25188	43028	43028					0.09415427371413898
NIFEGIIK	8	Unmodified	_NIFEGIIK_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|167|3|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|167|3|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|167|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.2818298339844	2	467.273835	932.533118	-0.038533	-1.8005E-05	-3.7861	-0.0017691	-3.8246	-0.0017871	467.2718911901357	16.543	0.27497	15.944	15.74	16.015	-0.59873					10	5	3	0	0	0	0.4196	1	132	132		23.042	5.6775	1	67037			37774	14627	25177	25189	43029	43029					0.06415259419907215
NIFEGIIK	8	Unmodified	_NIFEGIIK_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|167|3|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|167|3|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|167|3|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	467.273835	932.533118	0.19239	8.9897E-05	-4.3076	-0.0020128	-4.1152	-0.0019229	467.2718082968948	16.516	0.22998	16.029	15.913	16.143	-0.48718	0.042488	-9.8087E-05	NaN	23.042	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65115			37775	14627	25177	25189							0.06415259419907215
NIFKLLLIHV	10	Unmodified	_NIFKLLLIHV_					0	0	0			REV__ENST00000319715.8_2_16:24551838-24551922:+|nuORF	REV__ENST00000319715.8_2_16:24551838-24551922:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9300842285156	3	403.928781	1208.76451	0.032409	1.3091E-05	2.1418	0.00086513	2.1742	0.00087822	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.85285	1	3906	3906		16.717	6.6135	1	2636600	+		37776	24992	25178	25190	43030	43030					0.1684830712160874
NIFKLLLIHV	10	Unmodified	_NIFKLLLIHV_					0	0	0			REV__ENST00000319715.8_2_16:24551838-24551922:+|nuORF	REV__ENST00000319715.8_2_16:24551838-24551922:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.93017578125	3	403.928781	1208.76451	0.41682	0.00016837	1.3719	0.00055414	1.7887	0.0007225	403.92919444194524	46.164	0.84489	46.636	46.254	47.099	0.47139					60	20	4	0	0	0	0.85259	1	4366	4366		20.03	7.2188	1	1771500	+		37777	24992	25178	25190	43031	43031					0.1684830712160874
NIFKLLLIHV	10	Unmodified	_NIFKLLLIHV_					0	0	0			REV__ENST00000319715.8_2_16:24551838-24551922:+|nuORF	REV__ENST00000319715.8_2_16:24551838-24551922:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92919921875	3	403.928781	1208.76451	-0.87887	-0.000355	2.7255	0.0011009	1.8467	0.00074592	403.9297749934075	46.008	1.1325	46.904	46.447	47.58	0.89542					87	27	4	0	0	0	0.85441	1	4361	4361		20.837	5.4997	1	2092900	+		37778	24992	25178	25190	43032	43032					0.1684830712160874
NIFRGLVSL	9	Unmodified	_NIFRGLVSL_					0	0	0		nc|ENSG00000186907|Q86UN3-2|RTN4RL2;ENSG00000186907|ENST00000335099|RTN4RL2	nc|ENSG00000186907|Q86UN3-2|RTN4RL2	nc|ENSG00000186907|Q86UN3-2|RTN4RL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8043518066406	2	509.805834	1017.59712	-0.23209	-0.00011832	-3.4044	-0.0017356	-3.6365	-0.0018539	509.8040269548471	84.32	2.2366	84.755	83.379	85.615	0.43538					129	54	3	0	0	0	0.71772	1	9910	9910		39.253	0	1	819870			37779	7826	25179	25191	43033	43033					0.08902039576844345
NIGAGGPPQ	9	Unmodified	_NIGAGGPPQ_					0	0	0		ENSG00000177613|ENST00000331173|CSTF2T	ENSG00000177613|ENST00000331173|CSTF2T	ENSG00000177613|ENST00000331173|CSTF2T	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.7104187011719	2	405.70886	809.403166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.482	1	28.309	27.809	28.809	-0.17336								0	0	0	0.28772	1	1736	1736		35.618	3.6634	1				37780	7151	25180	25192	43034	43034					-0.00915916859241861
NIGFPGLILGV	11	Unmodified	_NIGFPGLILGV_					0	0	0			REV__ENSG00000168300|ENST00000522514|PCMTD1	REV__ENSG00000168300|ENST00000522514|PCMTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3265991210938	2	550.329142	1098.64373	-1.4511	-0.00079856	-2.4137	-0.0013283	-3.8647	-0.0021269	550.3279242402356	100.07	1.1382	100.24	99.716	100.85	0.17199					63	25	3	0	0	0	0.72918	1	10382	10382		26.693	1.5669	1	345000	+		37781	21476	25181	25193	43035	43035					0.09835479408161518
NIILYVRGNV	10	Unmodified	_NIILYVRGNV_					0	0	0			REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.8404541015625	2	580.842948	1159.67134	-0.90693	-0.00052678	-3.2677	-0.001898	-4.1746	-0.0024248	580.8407767096548	69.755	0.8518	69.79	69.548	70.399	0.035622					124	41	4	0	0	0	0.86763	1	6707	6707		26.693	3.1702	1	14836000	+		37782	20406	25182	25194	43036	43036					0.09789382668373037
NIITITQRRLH	11	Unmodified	_NIITITQRRLH_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6085510253906	3	455.608882	1363.80482	-1.2087	-0.00055071	0.20199	9.203E-05	-1.0067	-0.00045868	455.6088629206426	71.18	2.4746	71.313	70.49	72.965	0.13356					216	101	3	0	0	0	0.6396	4	6483	6423;6433;6439;6483		39.873	4.6949	1	705050			37783	7939	25183	25195	43037;43038;43039;43040	43040					0.13746621774089363
NIITITQRRLH	11	Unmodified	_NIITITQRRLH_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.608154296875	3	455.608882	1363.80482	0.47438	0.00021613	-1.8169	-0.00082781	-1.3426	-0.00061168	455.6080397143124	69.123	0.72706	69.251	68.88	69.607	0.12838					69	31	3	0	0	0	0.71803	1	6233	6233		28.577	0	1	233840			37784	7939	25183	25195	43041	43041					0.13746621774089363
NIITITQRRLH	11	Unmodified	_NIITITQRRLH_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.6082458496094	3	455.608882	1363.80482	0.49166	0.00022401	-1.6077	-0.0007325	-1.1161	-0.0005085	455.608083696801	71.141	2.3916	71.271	70.4	72.791	0.12965					199	101	2	0	0	0	0.52654	5	6489	6422;6448;6454;6471;6489		50.034	16.112	1	552710			37785	7939	25183	25195	43042;43043;43044;43045;43046	43046					0.13746621774089363
NIITITQRRLH	11	Unmodified	_NIITITQRRLH_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6075744628906	3	455.608882	1363.80482	-1.1702	-0.00053316	0.058698	2.6743E-05	-1.1115	-0.00050642	455.6088473881977	71.256	2.1835	71.333	70.628	72.811	0.076225					206	91	3	0	0	0	0.64964	5	6416	6416;6431;6438;6450;6465		38.714	15.819	1	589510			37786	7939	25183	25195	43047;43048;43049;43050;43051	43047					0.13746621774089363
NIITITQRRLH	11	Unmodified	_NIITITQRRLH_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.608642578125	3	455.608882	1363.80482	-0.55128	-0.00025117	-0.41199	-0.00018771	-0.96328	-0.00043888	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.47591	13	7026	6923;6969;7026;7038;7051;7073;7096;7150;7162;7174;7196;7207;7218		53.597	25.02	1	1732400			37787	7939	25183	25195	43052;43053;43054;43055;43056;43057;43058;43059;43060;43061;43062;43063;43064	43054					0.13746621774089363
NIITITQRRLH	11	Unmodified	_NIITITQRRLH_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6084899902344	3	455.608882	1363.80482	-0.20528	-9.3526E-05	-0.84962	-0.00038709	-1.0549	-0.00048062	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.42858	13	7533	7303;7320;7345;7397;7418;7498;7521;7533;7544;7554;7565;7640;7679		57.149	25.514	1	1835000			37788	7939	25183	25195	43065;43066;43067;43068;43069;43070;43071;43072;43073;43074;43075;43076;43077	43072					0.13746621774089363
NIITITQRRLH	11	Unmodified	_NIITITQRRLH_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.60809326171875	3	455.608882	1363.80482	-0.88204	-0.00040187	-0.15867	-7.2292E-05	-1.0407	-0.00047416	455.6087169982617	69.938	2.9068	70.322	69.842	72.749	0.38416					146	73	3	0	0	0	0.59831	8	7770	7686;7707;7727;7749;7770;7794;7820;7833		44.639	14.747	1	869170			37789	7939	25183	25195	43078;43079;43080;43081;43082;43083;43084;43085	43082					0.13746621774089363
NIITITQRRLH	11	Unmodified	_NIITITQRRLH_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.94256591796875	3	455.608882	1363.80482	-0.02024	-9.2214E-06	-1.0093	-0.00045987	-1.0296	-0.00046909	455.608304720296	65.806	3.5163	66.359	63.877	67.393	0.5526					173	94	4	0	0	0	0.61824	12	7186	6943;6952;6976;7011;7067;7079;7131;7157;7177;7186;7210;7253		42.338	8.3295	1	1863500			37790	7939	25183	25195	43086;43087;43088;43089;43090;43091;43092;43093;43094;43095;43096;43097	43095					0.13746621774089363
NIITITQRRLH	11	Unmodified	_NIITITQRRLH_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.60858154296875	3	455.608882	1363.80482	-0.22489	-0.00010246	-0.74709	-0.00034038	-0.97198	-0.00044284	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.36918	11	7574	7352;7406;7430;7503;7526;7551;7562;7574;7634;7660;7673		61.765	21.706	1	1863900			37791	7939	25183	25195	43098;43099;43100;43101;43102;43103;43104;43105;43106;43107;43108	43105					0.13746621774089363
NIITITQRRLH	11	Unmodified	_NIITITQRRLH_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6077880859375	3	455.608882	1363.80482	-0.22342	-0.00010179	-0.82695	-0.00037677	-1.0504	-0.00047856	455.6084251791674	69.831	3.554	70.377	70.039	73.593	0.54693					191	88	3	0	0	0	0.32097	9	7772	7704;7721;7731;7741;7751;7762;7772;7795;7819		70.399	30.34	1	1270100			37792	7939	25183	25195	43109;43110;43111;43112;43113;43114;43115;43116;43117	43115					0.13746621774089363
NIITITQRRLH	11	Unmodified	_NIITITQRRLH_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	455.608882	1363.80482	-1.2119	-0.00055217	0.09675	4.408E-05	-1.1152	-0.00050809	455.60886736440665	69.858	0.64455	69.993	69.847	70.492	0.13506	-0.14152	0.00079497	NaN	70.399	53	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1122400			37793	7939	25183	25195							0.13746621774089363
NIKDLCRGNHL	11	Unmodified	_NIKDLCRGNHL_					0	0	0			REV__ENSG00000148400|ENST00000651671|NOTCH1	REV__ENSG00000148400|ENST00000651671|NOTCH1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	427.30267333984375	3	428.227673	1281.66119	-1.5519	-0.00066456	2.787	0.0011935	1.2351	0.00052891	428.5637530631674	62.646	0.076462	62.646	62.607	62.683	0					5	3	2	0	0	0	0.1728	1	5479	5479		21.78	0	1	26782	+		37794	20116	25184	25196	43118	43118					0.03162451671482813
NIKEENADM	9	Unmodified	_NIKEENADM_					0	0	0			REV__nc|ENSG00000115306|Q01082-3|SPTBN1	REV__nc|ENSG00000115306|Q01082-3|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.2382202148438	2	532.239864	1062.46517	0.26072	0.00013877	-3.9573	-0.0021063	-3.6966	-0.0019675	532.2375023776897	39.934	0.69376	39.904	39.565	40.258	-0.03027					33	16	3	0	0	0	0.64922	1	2791	2791		44.117	6.9577	1	251430	+		37795	18106	25185	25197	43119	43119					-0.0635597829307244
NIKEYYPV	8	Unmodified	_NIKEYYPV_					0	0	0			REV__ENSG00000013619|ENST00000370401|MAMLD1	REV__ENSG00000013619|ENST00000370401|MAMLD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.809814453125	2	513.26875	1024.52295	0.058883	3.0223E-05	-4.0955	-0.0021021	-4.0366	-0.0020719	513.2663946263542	50.767	0.82773	50.765	50.392	51.22	-0.0020447					37	25	2	0	0	0	0.4196	1	4333	4333		12.959	0	1	80058	+		37796	16200	25186	25198	43120	43120					0.011666516946434058
NIKHLSAGLQL	11	Unmodified	_NIKHLSAGLQL_					0	0	0		nc|ENSG00000133958|Q9P2D8-2|UNC79;chr14:93540831-93542466|19|12.21|0.74|4.05|+|ENST00000621021|UNC79,UNC79;chr14:93532578-93537989|19|12.0|0.65|4.2|+|ENST00000621021|UNC79,UNC79;chr14:93529326-93532550|21|10.48|0.57|4.21|+|ENST00000621021|UNC79,UNC79;chr14:93524042-93528558|19|11.84|0.52|4.51|+|ENST00000621021|UNC79,UNC79;chr14:93477728-93487663|23|11.22|0.59|4.24|+|ENST00000621021|UNC79,UNC79;chr14:93474393-93477558|17|15.47|0.73|4.4|+|ENST00000555664|UNC79,UNC79;nc|ENSG00000133958|Q9P2D8|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;ENSG00000133958|ENST00000695012|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8568725585938	2	597.35368	1192.69281	0.9357	0.00055895	2.5932	0.001549	3.5289	0.002108	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.67778	1	9568	9568		35.152	1.2304	1	19058000			37797	180	25187	25199	43121	43121					0.10416767697097384
NIKKALLSGY	10	Unmodified	_NIKKALLSGY_					0	0	0		nc|ENSG00000089876|Q7L7V1-2|DHX32;ENSG00000089876|ENST00000284690|DHX32	nc|ENSG00000089876|Q7L7V1-2|DHX32	nc|ENSG00000089876|Q7L7V1-2|DHX32	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8320922851562	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.8651	1	10880	10880		25.574	1.0549	1	5381700			37798	1634	25188	25200	43122	43122					0.10094577919812764
NIKKIIDM	8	Unmodified	_NIKKIIDM_					0	0	0			REV__ENSG00000131013|ENST00000253329|PPIL4	REV__ENSG00000131013|ENST00000253329|PPIL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79071044921875	2	487.788795	973.563038	0.84663	0.00041298	2.8765	0.0014031	3.7232	0.0018161	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.87922	2	8758	8699;8758		40.573	6.4001	1	2238600	+		37799	18927	25189	25201	43123;43124	43124					0.07519875093601058
NIKKIIDM	8	Unmodified	_NIKKIIDM_					0	0	0			REV__ENSG00000131013|ENST00000253329|PPIL4	REV__ENSG00000131013|ENST00000253329|PPIL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7907409667969	2	487.788795	973.563038	-0.24073	-0.00011743	4.0932	0.0019966	3.8524	0.0018792	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.90465	2	9812	9812;9836		40.573	4.9543	1	1981400	+		37800	18927	25189	25201	43125;43126	43125					0.07519875093601058
NIKKLLFHQ	9	Unmodified	_NIKKLLFHQ_					0	0	0		nc|ENSG00000113580|P04150-16|NR3C1;nc|ENSG00000113580|P04150-15|NR3C1;nc|ENSG00000113580|P04150-14|NR3C1;nc|ENSG00000113580|P04150-5|NR3C1;nc|ENSG00000113580|P04150-13|NR3C1;nc|ENSG00000113580|P04150-12|NR3C1;nc|ENSG00000113580|P04150-11|NR3C1;nc|ENSG00000113580|P04150-8|NR3C1;nc|ENSG00000113580|P04150-10|NR3C1;ENSG00000113580|ENST00000394464|NR3C1;nc|ENSG00000113580|P04150-3|NR3C1	nc|ENSG00000113580|P04150-16|NR3C1	nc|ENSG00000113580|P04150-16|NR3C1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.5328979492188	2	570.848033	1139.68151	0.32289	0.00018432	-0.89417	-0.00051043	-0.57127	-0.00032611	571.3490925357466	61.783	0.25782	62.337	62.171	62.428	0.55386					7	5	2	0	0	0	0.20789	1	6600	6600		15.642	0.77694	1	87262			37801	2729	25190	25202	43127	43127					0.11725990393620123
NIKKLTAG	8	Unmodified	_NIKKLTAG_					0	0	0		ENSG00000153406|ENST00000283429|NMRAL1	ENSG00000153406|ENST00000283429|NMRAL1	ENSG00000153406|ENST00000283429|NMRAL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.306640625	2	422.766178	843.517802	0.38511	0.00016281	0.52407	0.00022156	0.90918	0.00038437	422.76626049000447	26.234	0.48828	25.977	25.726	26.214	-0.2572					16	10	2	0	0	0	0.4196	1	1451	1451		12.959	0	1	42772			37802	5234	25191	25203	43128	43128					0.08978392622714182
NIKQPKIIQK	10	Unmodified	_NIKQPKIIQK_					0	0	0			REV__ENST00000306862.6_1_5:43506261-43506360:-|nuORF	REV__ENST00000306862.6_1_5:43506261-43506360:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.169921875	2	605.387522	1208.76049	-0.38613	-0.00023376	2.506	0.0015171	2.1199	0.0012834	605.3888585209385	43.294	1.2118	43.727	43.295	44.506	0.4334					64	29	3	0	0	0	0.37624	1	3980	3980		27.882	0	1	807950	+		37803	24837	25192	25204	43129	43129					0.16446217627890292
NIKSTTRLV	9	Unmodified	_NIKSTTRLV_					0	0	0			REV__ENSG00000131375|ENST00000253693|CAPN7	REV__ENSG00000131375|ENST00000253693|CAPN7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3140258789062	2	516.314023	1030.61349	0.62951	0.00032503	-1.1495	-0.00059351	-0.51999	-0.00026848	516.313424955158	31.968	1.9583	32.075	31.334	33.292	0.10707					88	45	3	0	0	0	0.7932	1	2215	2215		26.693	2.4902	1	546410	+		37804	18947	25193	25205	43130	43130					0.09941120742928433
NIKYKENYGIR	11	Unmodified	_NIKYKENYGIR_					0	0	0		ENSG00000198092|ENST00000356291|TMPRSS11F	ENSG00000198092|ENST00000356291|TMPRSS11F	ENSG00000198092|ENST00000356291|TMPRSS11F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.589111328125	3	466.589376	1396.7463	-1.2904	-0.00060211	1.103	0.00051463	-0.18748	-8.7477E-05	466.58979194970493	58.349	0.76842	58.383	58.073	58.841	0.033905					65	25	4	0	0	0	0.75779	1	5347	5347		20.315	0.68808	1	414830			37805	8238	25194	25206	43131	43131					0.0637952040892742
NILAWQPPE	9	Unmodified	_NILAWQPPE_					0	0	0		ENSG00000214491|ENST00000402034|SEC14L6	ENSG00000214491|ENST00000402034|SEC14L6	ENSG00000214491|ENST00000402034|SEC14L6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2553100585938	2	534.279649	1066.54475	0.15487	8.2743E-05	-0.52043	-0.00027806	-0.36556	-0.00019531	534.2792642220315	37.831	0.52665	38.145	37.942	38.468	0.31312					23	13	2	0	0	0	0.20789	1	3034	3034		34.173	0	1	213510			37806	8627	25195	25207	43132	43132					0.014134564432424668
NILEEQDKSQ	10	Unmodified	_NILEEQDKSQ_					0	0	0		ENSG00000180336|ENST00000409122|MEIOC;nc|ENSG00000180336|A2RUB1-5|MEIOC	ENSG00000180336|ENST00000409122|MEIOC	ENSG00000180336|ENST00000409122|MEIOC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7059326171875	3	401.866575	1202.5779	1.6698	0.00067104	-0.20098	-8.0766E-05	1.4688	0.00059028	401.8664715035941	25.306	0.53709	24.978	24.567	25.104	-0.32825					13	11	2	0	0	0	0.37624	1	1278	1278		19.263	3.2559	1	44398			37807	7325	25196	25208	43133	43133					-0.015290062953681627
NILELLKKTSD	11	Unmodified	_NILELLKKTSD_					0	0	0			REV__L1MA3_dup7702|chr15:44351599-44352630:+|1.1123394787607703|0.1038654815763851|3.42|63.0|17|2|sense	REV__L1MA3_dup7702|chr15:44351599-44352630:+|1.1123394787607703|0.1038654815763851|3.42|63.0|17|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	637.3687133789062	2	637.371735	1272.72892	0.0096069	6.1232E-06	-1.955	-0.001246	-1.9454	-0.0012399	637.3704089191367	105.98	2.6955	105.98	104.5	107.2	0					156	62	4	0	0	0	0.75906	1	11039	11039		20.03	0.92695	1	1384300	+		37808	29478	25197	25209	43134	43134					0.10346180083274703
NILGLVLP	8	Unmodified	_NILGLVLP_					0	0	0		nc|ENSG00000121807|P41597|CCR2;ENSG00000121807|ENST00000445132|CCR2	nc|ENSG00000121807|P41597|CCR2	nc|ENSG00000121807|P41597|CCR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7749938964844	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.89457	1	3289	3289		37.028	0	1	10965000			37809	14879	25198	25210	43135	43135					0.10712464770847419
NILGLVLP	8	Unmodified	_NILGLVLP_					0	0	0		nc|ENSG00000121807|P41597|CCR2;ENSG00000121807|ENST00000445132|CCR2	nc|ENSG00000121807|P41597|CCR2	nc|ENSG00000121807|P41597|CCR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.774658203125	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.86791	2	3356	3356;3378		35.201	0	1	11423000			37810	14879	25198	25210	43136;43137	43136					0.10712464770847419
NILGLVLP	8	Unmodified	_NILGLVLP_					0	0	0		nc|ENSG00000121807|P41597|CCR2;ENSG00000121807|ENST00000445132|CCR2	nc|ENSG00000121807|P41597|CCR2	nc|ENSG00000121807|P41597|CCR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7746276855469	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.88915	1	3291	3291		35.201	0	1	10266000			37811	14879	25198	25210	43138	43138					0.10712464770847419
NILGLVLP	8	Unmodified	_NILGLVLP_					0	0	0		nc|ENSG00000121807|P41597|CCR2;ENSG00000121807|ENST00000445132|CCR2	nc|ENSG00000121807|P41597|CCR2	nc|ENSG00000121807|P41597|CCR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7754211425781	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.91005	1	2941	2941		42.474	0	1	10440000			37812	14879	25198	25210	43139	43139					0.10712464770847419
NILGLVLP	8	Unmodified	_NILGLVLP_					0	0	0		nc|ENSG00000121807|P41597|CCR2;ENSG00000121807|ENST00000445132|CCR2	nc|ENSG00000121807|P41597|CCR2	nc|ENSG00000121807|P41597|CCR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7758483886719	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.88915	2	2954	2920;2954		37.028	0	1	9723800			37813	14879	25198	25210	43140;43141	43141					0.10712464770847419
NILIGLVP	8	Unmodified	_NILIGLVP_					0	0	0			REV__nc|ENSG00000124749|Q96P44-3|COL21A1	REV__nc|ENSG00000124749|Q96P44-3|COL21A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7744445800781	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.89457	1	3560	3560		37.028	5.0736	1	11423000	+		37814	18608	25199	25211	43142	43142					0.10712464770858787
NILIGLVP	8	Unmodified	_NILIGLVP_					0	0	0			REV__nc|ENSG00000124749|Q96P44-3|COL21A1	REV__nc|ENSG00000124749|Q96P44-3|COL21A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7739562988281	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.86791	2	3416	3209;3416		33.516	0	1	10266000	+		37815	18608	25199	25211	43143;43144	43144					0.10712464770858787
NILIGLVP	8	Unmodified	_NILIGLVP_					0	0	0			REV__nc|ENSG00000124749|Q96P44-3|COL21A1	REV__nc|ENSG00000124749|Q96P44-3|COL21A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7743225097656	2	419.773471	837.53239	-1.7976	-0.00075458	3.9115	0.0016419	2.1139	0.00088736	419.77504327395843	41.402	2.6775	41.816	41.329	44.007	0.4139					184	68	5	0	0	0	0.86288	1	3583	3583		26.796	2.5934	1	169320000	+		37816	18608	25199	25211	43145	43145					0.10712464770858787
NILLRPVSSRV	11	Unmodified	_NILLRPVSSRV_					0	0	0			REV__ENSG00000142082|ENST00000382743|SIRT3	REV__ENSG00000142082|ENST00000382743|SIRT3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	627.3870849609375	2	627.388054	1252.76155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.14	1	108.14	107.64	108.64	0								0	0	0	0.56276	1	11260	11260		18.262	2.6203	1		+		37817	19721	25200	25212	43146	43146					0.1452843199679137
NILLVKTK	8	Unmodified	_NILLVKTK_					0	0	0			REV__ENST00000280187.11_1_4:176555944-176556025:-|nuORF	REV__ENST00000280187.11_1_4:176555944-176556025:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.798583984375	2	464.813128	927.611703	-1.6812	-0.00078146	1.5675	0.0007286	-0.11372	-5.2858E-05	464.81367101438235	36.943	1.0254	36.954	36.524	37.55	0.011173					45	22	3	0	0	0	0.4196	1	2450	2450		53.351	0	1	451140	+		37818	24602	25201	25213	43147	43147					0.14500111724998987
NILNSTVEIM	10	Oxidation (M)	_NILNSTVEIM(Oxidation (M))_		NILNSTVEIM(1)		NILNSTVEIM(70)	0	0	1			REV__ENSG00000106771|ENST00000374586|TMEM245	REV__ENSG00000106771|ENST00000374586|TMEM245	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2943115234375	2	575.294639	1148.57472	-0.38736	-0.00022285	-3.641	-0.0020946	-4.0284	-0.0023175	575.2938552163392	76.272	2.3519	76.672	75.494	77.846	0.3997					143	62	4	0	0	0	0.33399	1	8660	8660		69.628	10.846	1	1387300	+		37819	17627	25202	25214	43148	43148		254			0.006380273262493574
NILPLLIVL	9	Unmodified	_NILPLLIVL_					0	0	0			REV__ENSG00000134115|ENST00000446702|CNTN6	REV__ENSG00000134115|ENST00000446702|CNTN6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3450927734375	2	504.346803	1006.67905	0.37851	0.0001909	-3.3786	-0.001704	-3.0001	-0.0015131	504.3450503233635	54.756	1.9259	55.325	53.982	55.908	0.56836					89	45	3	0	0	0	0.77546	1	5622	5622		31.955	6.5047	1	1764400	+		37820	19116	25203	25215	43149	43149					0.17598141935934564
NILPRRRRRGR	11	Unmodified	_NILPRRRRRGR_					0	0	0		ENST00000452622.1_1_7:562147-562501:+|nuORF	ENST00000452622.1_1_7:562147-562501:+|nuORF	ENST00000452622.1_1_7:562147-562501:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	484.3096923828125	3	483.974781	1448.90251	-2.0046	-0.0009702	1.5675	0.00075861	-0.43719	-0.00021159	483.97554786695883	16.573	0.33445	16.573	16.456	16.79	0					34	15	3	0	0	0	0.76892	1	134	134		17.833	10.814	1	95521			37821	11922	25204	25216	43150	43150					0.19601868213408125
NILRIFVWVIA	11	Unmodified	_NILRIFVWVIA_					0	0	0		nc|ENSG00000133105|Q8WXD0-2|RXFP2;chr13:31781742-31786383|21|55.9|0.04|10.53|+|ENST00000380314|RXFP2,RXFP2;ENSG00000133105|ENST00000298386|RXFP2	nc|ENSG00000133105|Q8WXD0-2|RXFP2	nc|ENSG00000133105|Q8WXD0-2|RXFP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6097412109375	3	448.611452	1342.81253	-1.3368	-0.0005997	-3.3048	-0.0014826	-4.6416	-0.0020823	448.60975879741926	77.285	1.2875	77.285	77.023	78.311	0					128	61	3	0	0	0	0.7896	1	7085	7085		13.508	1.0751	1	598490			37822	151	25205	25217	43151	43151					0.15483381041644861
NILRLKSKQ	9	Unmodified	_NILRLKSKQ_					0	0	0		ENSG00000143669|ENST00000389793|LYST;ENST00000473037.5_1_1:235826242-235897989:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3505859375	2	550.35094	1098.68733	-0.13237	-7.2852E-05	0.048023	2.6429E-05	-0.08435	-4.6422E-05	550.3508827027325	18.018	1.0361	17.535	17.035	18.071	-0.48256					58	22	4	0	0	0	0.76764	1	355	355		34.173	5.0025	1	1122100			37823	4656	25206	25218	43152	43152					0.14193088905290097
NILRLKSKQ	9	Unmodified	_NILRLKSKQ_					0	0	0		ENSG00000143669|ENST00000389793|LYST;ENST00000473037.5_1_1:235826242-235897989:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3505859375	2	550.35094	1098.68733	0.10491	5.774E-05	-0.18223	-0.00010029	-0.077316	-4.2551E-05	550.3507908580577	18.188	0.96065	17.566	17.023	17.983	-0.62141					52	22	3	0	0	0	0.51307	1	379	379		51.335	3.3759	1	1316100			37824	4656	25206	25218	43153	43153					0.14193088905290097
NILSPTSRHLL	11	Unmodified	_NILSPTSRHLL_					0	0	0		ENSG00000187510|ENST00000344636|PLEKHG7	ENSG00000187510|ENST00000344636|PLEKHG7	ENSG00000187510|ENST00000344636|PLEKHG7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.5667724609375	3	417.5787	1249.71427	1.0806	0.00045124	-4.017	-0.0016774	-2.9364	-0.0012262	417.9113433045588	36.25	0.12519	36.531	36.47	36.595	0.28173					4	2	2	0	0	0	0.17437	1	2840	2840		32.034	16.701	1	17702			37825	7856	25207	25219	43154	43154					0.09940152725812368
NILSRLHPLFS	11	Unmodified	_NILSRLHPLFS_					0	0	0			REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.87255859375	2	648.874779	1295.73501	-1.1412	-0.00074051	-3.9063	-0.0025347	-5.0475	-0.0032752	648.8725280227517	99.334	2.2334	99.52	98.635	100.87	0.18582					120	51	3	0	0	0	0.58425	1	10312	10312		45.972	8.1607	1	245270	+		37826	19887	25208	25220	43155	43155					0.09896743105468886
NIMELLLLL	9	Unmodified	_NIMELLLLL_					0	0	0			REV__ENST00000526129.5_1_1:76199287-76200536:+|nuORF	REV__ENST00000526129.5_1_1:76199287-76200536:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.3297119140625	2	536.327753	1070.64095	0.38321	0.00020553	3.5144	0.0018849	3.8976	0.0020904	536.3294996439821	17.697	0.28451	17.62	17.488	17.773	-0.07671					30	11	3	0	0	0	0.17307	1	232	232		79.451	8.1553	1	289570	+		37827	28196	25209	25221	43156	43156					0.10845887958998901
NIMELLLLL	9	Unmodified	_NIMELLLLL_					0	0	0			REV__ENST00000526129.5_1_1:76199287-76200536:+|nuORF	REV__ENST00000526129.5_1_1:76199287-76200536:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	536.327753	1070.64095	0.38321	0.00020553	3.5144	0.0018849	3.8976	0.0020904	536.3294996439821	17.697	0.28451	17.62	17.488	17.773	-0.07671	-0.010574	0.00063507	NaN	79.451	30	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	289570	+		37828	28196	25209	25221							0.10845887958998901
NIMELLLLL	9	Unmodified	_NIMELLLLL_					0	0	0			REV__ENST00000526129.5_1_1:76199287-76200536:+|nuORF	REV__ENST00000526129.5_1_1:76199287-76200536:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	536.327753	1070.64095	0.9992	0.0005359	2.4689	0.0013241	3.4681	0.00186	536.3288651192009	17.738	0.39529	17.659	17.545	17.94	-0.078943	0.028691	-0.00048638	NaN	79.451	36	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	258950	+		37829	28196	25209	25221							0.10845887958998901
NIMMVKLKK	9	Unmodified	_NIMMVKLKK_					0	0	0		nc|ENSG00000198054|Q96T75-6|DSCR8;ENST00000478613.5_1_21:39494717-39528493:+|nuORF	nc|ENSG00000198054|Q96T75-6|DSCR8	nc|ENSG00000198054|Q96T75-6|DSCR8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.8311767578125	2	552.835223	1103.65589	-1.299	-0.00071813	-1.0767	-0.00059522	-2.3757	-0.0013134	552.8347210563574	83.7	2.6246	83.838	82.553	85.177	0.13811					95	60	2	0	0	0	0.76764	1	8107	8107		34.173	1.3601	1	186100			37830	12393	25210	25222	43157	43157					0.10821056555323594
NIMTVPALPKS	11	Unmodified	_NIMTVPALPKS_					0	0	0		nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9;ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9	nc|ENSG00000239732|Q9NR96-2|TLR9	nc|ENSG00000239732|Q9NR96-2|TLR9	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.818359375	2	585.831191	1169.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.69	1	119.69	119.19	120.19	0								0	0	0	0.56276	1	12132	12132		17.468	0	1				37831	8772	25211	25223	43158	43158					0.06979200839509758
NINDKNFPFWL	11	Unmodified	_NINDKNFPFWL_					0	0	0		ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1;ENST00000464072.1_1_2:191843483-191848388:-|nuORF	ENSG00000115415|ENST00000361099|STAT1	ENSG00000115415|ENST00000361099|STAT1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.36846923828125	3	469.906705	1406.69829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.57	1	113.67	113.17	114.17	0.10217								0	0	0	0.56276	1	12181	12181		10.104	0.45776	1				37832	2841	25212	25224	43159	43159					0.011204464888805887
NIPFPPQGF	9	Unmodified	_NIPFPPQGF_					0	0	0		ENST00000472931.6_1_7:13946033-14025001:-|nuORF;nc|ENSG00000006468|P50549-4|ETV1;nc|ENSG00000006468|P50549-5|ETV1;nc|ENSG00000006468|P50549-6|ETV1;nc|ENSG00000006468|P50549-3|ETV1;nc|ENSG00000006468|P50549-2|ETV1;ENSG00000006468|ENST00000430479|ETV1	ENST00000472931.6_1_7:13946033-14025001:-|nuORF	ENST00000472931.6_1_7:13946033-14025001:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.14739990234375	2	508.763635	1015.51272	-0.62337	-0.00031715	-3.1317	-0.0015933	-3.7551	-0.0019105	508.76135071409084	32.213	0.44808	32.207	31.993	32.441	-0.0061455					16	10	2	0	0	0	0.20789	1	1827	1827		17.365	9.1337	1	21560			37833	701	25213	25225	43160	43160					0.0055808876010132735
NIPIQWSY	8	Unmodified	_NIPIQWSY_					0	0	0			REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9	REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.7616882324219	2	510.761092	1019.50763	0.21129	0.00010792	0.15887	8.1142E-05	0.37016	0.00018906	510.76080464950286	53.877	0.91781	54.462	53.914	54.832	0.58474					35	21	2	0	0	0	0.87259	1	5481	5481		58.782	0.55203	1	772340	+		37834	19479	25214	25226	43161	43161					-0.0013421510253692759
NIPKRLEEV	9	Unmodified	_NIPKRLEEV_					0	0	0		ENST00000526500.5_1_11:111859671-111889757:+|nuORF;nc|ENSG00000150764|Q155Q3-2|DIXDC1;ENSG00000150764|ENST00000440460|DIXDC1	ENST00000526500.5_1_11:111859671-111889757:+|nuORF	ENST00000526500.5_1_11:111859671-111889757:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.3193359375	2	549.319306	1096.62406	2.1645	0.001189	-4.383	-0.0024077	-2.2185	-0.0012187	549.3166986536975	100.73	0.85296	101.07	100.61	101.46	0.34591					55	20	3	0	0	0	0.67345	1	12256	12256		42.396	5.9494	1	477000			37835	13260	25215	25227	43162	43162					0.0796110339738334
NIPNRRVLVTG	11	Unmodified	_NIPNRRVLVTG_					0	0	0		ENST00000519719.1_1_5:162930400-162939205:+|nuORF;nc|ENSG00000038274|Q9NZL9-5|MAT2B;ENST00000523606.1_1_5:162932677-162939205:+|nuORF;nc|ENSG00000038274|Q9NZL9-3|MAT2B;nc|ENSG00000038274|Q9NZL9-4|MAT2B;nc|ENSG00000038274|Q9NZL9-2|MAT2B;ENSG00000038274|ENST00000321757|MAT2B	ENST00000519719.1_1_5:162930400-162939205:+|nuORF	ENST00000519719.1_1_5:162930400-162939205:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.869140625	2	619.870028	1237.7255	-0.30632	-0.00018988	-0.95589	-0.00059253	-1.2622	-0.00078241	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.69995	1	9756	9756		31.53	4.8369	1	2103100			37836	914	25216	25228	43163	43163					0.11614974819917734
NIPRGKGV	8	Unmodified	_NIPRGKGV_					0	0	0		ENSG00000138771|ENST00000296043|SHROOM3;ENST00000486758.5_1_4:77631429-77663226:+|nuORF	ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.7558288574219	2	420.756144	839.497735	0.83426	0.00035102	-2.8991	-0.0012198	-2.0648	-0.00086878	420.75480151347654	20.751	1.3708	20.819	19.836	21.206	0.068251					89	57	2	0	0	0	0.81548	1	501	501		20.482	1.1219	1	62277			37837	4331	25217	25229	43164	43164					0.0715664168276362
NIPRGKGV	8	Unmodified	_NIPRGKGV_					0	0	0		ENSG00000138771|ENST00000296043|SHROOM3;ENST00000486758.5_1_4:77631429-77663226:+|nuORF	ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.7540588378906	2	420.756144	839.497735	0.012717	5.3507E-06	-2.3289	-0.00097989	-2.3162	-0.00097454	420.7550362120359	20.612	1.2168	20.688	19.803	21.02	0.07585					93	60	2	0	0	0	0.80706	1	519	519		19.36	4.6959	1	151820			37838	4331	25217	25229	43165	43165					0.0715664168276362
NIPTDKDSEF	10	Unmodified	_NIPTDKDSEF_					0	0	0		ENSG00000101745|ENST00000262126|ANKRD12;nc|ENSG00000101745|Q6UB98-2|ANKRD12	ENSG00000101745|ENST00000262126|ANKRD12	ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.7706298828125	2	583.272218	1164.52988	0.083774	4.8863E-05	-4.0137	-0.0023411	-3.9299	-0.0022922	583.2703593729441	20.232	0.56566	20.162	19.863	20.429	-0.069735					42	22	2	0	0	0	0.86763	1	515	515		26.693	2.1737	1	56549			37839	1956	25218	25230	43166	43166					-0.04580080215419002
NIPTLKTGFV	10	Unmodified	_NIPTLKTGFV_					0	0	0			REV__ENSG00000179817|ENST00000314254|MRGPRX4	REV__ENSG00000179817|ENST00000314254|MRGPRX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.317138671875	2	545.318774	1088.623	-0.33932	-0.00018504	-3.4934	-0.001905	-3.8327	-0.00209	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.86218	1	8862	8862		32.812	0.85756	1	4710900	+		37840	22356	25219	25231	43167	43167					0.08222889028479585
NIPVKWTED	9	Unmodified	_NIPVKWTED_					0	0	0		ENSG00000138792|ENST00000265162|ENPEP	ENSG00000138792|ENST00000265162|ENPEP	ENSG00000138792|ENST00000265162|ENPEP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.283447265625	2	551.282389	1100.55022	0.77804	0.00042892	2.4216	0.001335	3.1997	0.0017639	551.2835921377737	60.477	1.0057	60.445	59.982	60.987	-0.03223					48	28	2	0	0	0	0.62081	1	5710	5710		45.952	0	1	132690			37841	4334	25220	25232	43168	43168					0.003971352350617963
NIQPKRGAG	9	Unmodified	_NIQPKRGAG_					0	0	0			REV__ENST00000222792.10_1_7:29234327-29234525:+|nuORF	REV__ENST00000222792.10_1_7:29234327-29234525:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7692565917969	2	470.769783	939.525013	-0.53495	-0.00025184	-1.0241	-0.00048211	-1.559	-0.00073395	470.7691930623529	82.682	1.7879	83.156	82.672	84.46	0.47383					80	42	2	0	0	0	0.72402	1	9704	9704		38.806	0	1	971030	+		37842	24166	25221	25233	43169	43169					0.05283125223149909
NIRQGAKN	8	Unmodified	_NIRQGAKN_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.75433349609375	2	450.754133	899.493713	0.64847	0.0002923	-0.5493	-0.0002476	0.099173	4.4703E-05	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.85277	1	7741	7741		25.45	0	1	162850	+		37843	18987	25222	25234	43170	43170					0.03994552189044498
NIRRRIFY	8	Unmodified	_NIRRRIFY_					0	0	0			REV__ENSG00000101890|ENST00000218006|GUCY2F	REV__ENSG00000101890|ENST00000218006|GUCY2F	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8953857421875	2	569.335624	1136.6567	0.68742	0.00039137	1.1499	0.0006547	1.8373	0.0010461	569.3363394987169	29.609	0.16104	29.621	29.546	29.707	0.01123					10	7	2	0	0	0	0.4196	1	1264	1264		8.2313	0	1	48320	+		37844	17309	25223	25235	43171	43171					0.09383355310887964
NIRSAQEHQS	10	Unmodified	_NIRSAQEHQS_					0	0	0			REV__chr6:108166790-108171458|23|17.22|0.94|4.2|+|1|NR2E1,NR2E1|1	REV__chr6:108166790-108171458|23|17.22|0.94|4.2|+|1|NR2E1,NR2E1|1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.3223266601562	2	585.286525	1168.5585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.335	1	21.335	20.835	21.835	0								0	0	0	0.45132	1	566	566		32.812	2.3088	1		+		37845	15867	25224	25236	43172	43172					-0.0190391779563015
NIRSIPEKAFV	11	Unmodified	_NIRSIPEKAFV_					0	0	0		ENST00000550851.5_1_12:71833860-71960711:+|nuORF;nc|ENSG00000139292|O75473-3|LGR5;ENSG00000139292|ENST00000266674|LGR5	ENST00000550851.5_1_12:71833860-71960711:+|nuORF	ENST00000550851.5_1_12:71833860-71960711:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	637.368408203125	2	637.366787	1272.71902	2.7628	0.0017609	3.0551	0.0019472	5.8179	0.0037081	637.3686513642523	105.87	2.2422	105.84	105.02	107.26	-0.03714					153	52	4	0	0	0	0.67778	1	11682	11682		35.152	3.6222	1	1640000			37846	4359	25225	25237	43173	43173					0.09357036868550495
NIRSIPEKAFV	11	Unmodified	_NIRSIPEKAFV_					0	0	0		ENST00000550851.5_1_12:71833860-71960711:+|nuORF;nc|ENSG00000139292|O75473-3|LGR5;ENSG00000139292|ENST00000266674|LGR5	ENST00000550851.5_1_12:71833860-71960711:+|nuORF	ENST00000550851.5_1_12:71833860-71960711:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	637.366787	1272.71902	1.9238	0.0012262	3.1065	0.00198	5.0303	0.0032061	637.3683269670195	105.6	1.0071	105.75	105.03	106.03	0.15583	-0.033505	-0.0026079	NaN	35.152	45	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113410			37847	4359	25225	25237							0.09357036868550495
NISPRPRKGRS	11	Unmodified	_NISPRPRKGRS_					0	0	0		ENST00000432560.6_1_22:29759077-29763228:-|nuORF	ENST00000432560.6_1_22:29759077-29763228:-|nuORF	ENST00000432560.6_1_22:29759077-29763228:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3768310546875	2	634.370727	1266.7269	6.8435	0.0043413	3.4115	0.0021641	10.255	0.0065054	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.69931	2	13838	13802;13838		31.634	9.5793	1	75725			37848	11670	25226	25238	43174;43175	43175					0.10420608908702889
NISPRPRKGRS	11	Unmodified	_NISPRPRKGRS_					0	0	0		ENST00000432560.6_1_22:29759077-29763228:-|nuORF	ENST00000432560.6_1_22:29759077-29763228:-|nuORF	ENST00000432560.6_1_22:29759077-29763228:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.374755859375	2	634.370727	1266.7269	6.8453	0.0043425	3.5991	0.0022832	10.444	0.0066257	634.3730039069684	117.9	1.1075	117.8	117.39	118.5	-0.10152					70	51	2	0	0	0	0.77421	1	14081	14081		16.717	4.5105	1	39724			37849	11670	25226	25238	43176	43176					0.10420608908702889
NISQPETTK	9	Unmodified	_NISQPETTK_					0	0	0		ENSG00000175336|ENST00000398189|APOF	ENSG00000175336|ENST00000398189|APOF	ENSG00000175336|ENST00000398189|APOF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.24029541015625	2	509.264196	1016.51384	0.82431	0.00041979	-0.45696	-0.00023271	0.36735	0.00018708	509.263825947182	37.754	0.76539	38.277	37.907	38.672	0.52235					36	19	3	0	0	0	0.20789	1	3038	3038		39.253	0	1	273330			37850	7010	25227	25239	43177	43177					0.006242583383368583
NITHMIRKNK	10	Unmodified	_NITHMIRKNK_					0	0	0		ENST00000412461.2_1_22:19043875-19044022:+|nuORF	ENST00000412461.2_1_22:19043875-19044022:+|nuORF	ENST00000412461.2_1_22:19043875-19044022:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.9073791503906	3	418.908163	1253.70266	1.1829	0.00049552	-4.0463	-0.001695	-2.8635	-0.0011995	418.9065299420683	19.793	0.56478	19.323	19.019	19.584	-0.46967					28	11	4	0	0	0	0.86587	1	562	562		29.17	3.1067	1	118110			37851	11338	25228	25240	43178	43178					0.08595632430819933
NITTVRAR	8	Unmodified	_NITTVRAR_					0	0	0			REV__ENST00000405975.6_3_2:43819535-43823169:-|nuORF	REV__ENST00000405975.6_3_2:43819535-43823169:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7774658203125	2	465.777608	929.540663	-0.22002	-0.00010248	0.31699	0.00014765	0.096969	4.5166E-05	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.88601	1	9590	9590		34.173	0.67956	1	1042300	+		37852	26297	25229	25241	43179	43179					0.07307411740180214
NIVANRLAS	9	Unmodified	_NIVANRLAS_					0	0	0		nc|ENSG00000151176|Q8NHP8-2|PLBD2;ENSG00000151176|ENST00000280800|PLBD2	nc|ENSG00000151176|Q8NHP8-2|PLBD2	nc|ENSG00000151176|Q8NHP8-2|PLBD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27752685546875	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.69624	2	8809	8809;8864		40.778	1.1189	1	7040000			37853	5100	25230	25242	43180;43181	43180					0.060319920203255606
NIVANRLAS	9	Unmodified	_NIVANRLAS_					0	0	0		nc|ENSG00000151176|Q8NHP8-2|PLBD2;ENSG00000151176|ENST00000280800|PLBD2	nc|ENSG00000151176|Q8NHP8-2|PLBD2	nc|ENSG00000151176|Q8NHP8-2|PLBD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2773742675781	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.55097	1	7868	7868		49.442	3.4896	1	2142700			37854	5100	25230	25242	43182	43182					0.060319920203255606
NIVANRLAS	9	Unmodified	_NIVANRLAS_					0	0	0		nc|ENSG00000151176|Q8NHP8-2|PLBD2;ENSG00000151176|ENST00000280800|PLBD2	nc|ENSG00000151176|Q8NHP8-2|PLBD2	nc|ENSG00000151176|Q8NHP8-2|PLBD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774353027344	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.76255	2	7794	7682;7794		35.618	2.4355	1	1785900			37855	5100	25230	25242	43183;43184	43184					0.060319920203255606
NIVANRLAS	9	Unmodified	_NIVANRLAS_					0	0	0		nc|ENSG00000151176|Q8NHP8-2|PLBD2;ENSG00000151176|ENST00000280800|PLBD2	nc|ENSG00000151176|Q8NHP8-2|PLBD2	nc|ENSG00000151176|Q8NHP8-2|PLBD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774963378906	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.64922	1	8253	8253		44.117	0	1	6441000			37856	5100	25230	25242	43185	43185					0.060319920203255606
NIVANRLAS	9	Unmodified	_NIVANRLAS_					0	0	0		nc|ENSG00000151176|Q8NHP8-2|PLBD2;ENSG00000151176|ENST00000280800|PLBD2	nc|ENSG00000151176|Q8NHP8-2|PLBD2	nc|ENSG00000151176|Q8NHP8-2|PLBD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27752685546875	2	479.277441	956.540328	-0.72512	-0.00034753	0.71589	0.00034311	-0.0092246	-4.4211E-06	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.55097	3	9482	9482;9544;9628		49.442	7.0454	1	1822400			37857	5100	25230	25242	43186;43187;43188	43186					0.060319920203255606
NIVAVLLP	8	Unmodified	_NIVAVLLP_					0	0	0			REV__ENSG00000106013|ENST00000265224|ANKRD7	REV__ENSG00000106013|ENST00000265224|ANKRD7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7751159667969	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.86791	1	3441	3441		28.254	0	1	10965000	+		37858	17593	25231	25243	43189	43189					0.10712464770847419
NIVDDNRGM	9	Unmodified	_NIVDDNRGM_					0	0	0			REV__ENSG00000183549|ENST00000331849|ACSM5	REV__ENSG00000183549|ENST00000331849|ACSM5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3128662109375	2	517.240198	1032.46584	0.26185	0.00013544	-4.2599	-0.0022034	-3.9981	-0.002068	517.237922400062	30.94	2.0749	30.944	29.968	32.043	0.0037212					86	47	2	0	0	0	0.20789	1	2181	2181		62.107	24.948	1	253890	+		37859	22613	25232	25244	43190	43190					-0.04909138853372497
NIVFVTLRG	9	Unmodified	_NIVFVTLRG_					0	0	0		ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8038024902344	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.7932	1	8413	8413		24.519	1.4767	1	1874600			37860	1122	25233	25245	43191	43191					0.08902039576867082
NIVFVTLRG	9	Unmodified	_NIVFVTLRG_					0	0	0		ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8036193847656	2	509.805834	1017.59712	-0.054506	-2.7787E-05	-4.0835	-0.0020818	-4.1381	-0.0021096	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.69624	1	8376	8376		40.778	2.9666	1	828920			37861	1122	25233	25245	43192	43192					0.08902039576867082
NIVFVTLRG	9	Unmodified	_NIVFVTLRG_					0	0	0		ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8033752441406	2	509.805834	1017.59712	-1.4574	-0.000743	-2.7703	-0.0014123	-4.2277	-0.0021553	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.76419	1	8140	8140		35.152	8.3559	1	920080			37862	1122	25233	25245	43193	43193					0.08902039576867082
NIVFVTLRG	9	Unmodified	_NIVFVTLRG_					0	0	0		ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8036193847656	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.76255	2	8547	8547;8572		35.618	7.736	1	2989000			37863	1122	25233	25245	43194;43195	43194					0.08902039576867082
NIVFVTLRG	9	Unmodified	_NIVFVTLRG_					0	0	0		ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.803955078125	2	509.805834	1017.59712	0.31699	0.0001616	-4.4775	-0.0022826	-4.1605	-0.002121	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.58668	2	10231	10010;10231		47.657	9.8458	1	2635100			37864	1122	25233	25245	43196;43197	43197					0.08902039576867082
NIVGKPGTHT	10	Unmodified	_NIVGKPGTHT_					0	0	0			REV__ENSG00000116703|ENST00000391997|PDC	REV__ENSG00000116703|ENST00000391997|PDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2819213867188	2	512.282723	1022.55089	-0.052062	-2.6671E-05	-2.6058	-0.0013349	-2.6579	-0.0013616	512.2812910993212	86.454	3.487	86.521	85.51	88.997	0.067436					149	81	2	0	0	0	0.82886	1	8748	8748		37.812	0	1	329990	+		37865	18216	25234	25246	43198	43198					0.0405197467475773
NIVIVTCVP	9	Unmodified	_NIVIVTCVP_					0	0	0			REV__nc|ENSG00000174837|Q14246-4|ADGRE1	REV__nc|ENSG00000174837|Q14246-4|ADGRE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27777099609375	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.67345	1	10137	10137		42.396	6.7778	1	5642300	+		37866	22018	25235	25247	43199	43199					0.05648186202256511
NIVLFHSK	8	Unmodified	_NIVLFHSK_					0	0	0			REV__ENST00000419821.6_1_12:118587740-118587944:-|nuORF	REV__ENST00000419821.6_1_12:118587740-118587944:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774353027344	2	479.279452	956.544351	-1.5678	-0.00075141	-2.7191	-0.0013032	-4.2869	-0.0020546	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.89043	1	8562	8562		35.618	2.8059	1	6441000	+		37867	26480	25236	25248	43200	43200					0.0643408151404401
NIVNAPNKEL	10	Unmodified	_NIVNAPNKEL_					0	0	0			REV__ENST00000328747.11_1_7:64865258-64865408:+|nuORF	REV__ENST00000328747.11_1_7:64865258-64865408:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	556.3064575195312	2	556.308938	1110.60332	-0.59895	-0.0003332	-0.92996	-0.00051734	-1.5289	-0.00085055	556.3083395239671	90.786	3.2927	90.786	89.515	92.808	0					144	76	2	0	0	0	0.8545	1	8818	8818		36.447	1.2947	1	416120	+		37868	25097	25237	25249	43201	43201					0.0524451301771478
NIVNAPNKEL	10	Unmodified	_NIVNAPNKEL_					0	0	0			REV__ENST00000328747.11_1_7:64865258-64865408:+|nuORF	REV__ENST00000328747.11_1_7:64865258-64865408:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	556.3073120117188	2	556.308938	1110.60332	-1.4316	-0.00079643	-0.52475	-0.00029192	-1.9564	-0.0010884	556.308699276366	90.429	3.4878	90.605	89.562	93.05	0.17579					165	82	3	0	0	0	0.8545	1	9001	9001		36.447	7.2767	1	466610	+		37869	25097	25237	25249	43202	43202					0.0524451301771478
NIVNLQELVSA	11	Unmodified	_NIVNLQELVSA_					0	0	0			REV__ENSG00000132361|ENST00000651024|CLUH	REV__ENSG00000132361|ENST00000651024|CLUH	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	600.3331298828125	2	600.335153	1198.65575	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.938	1	94.136	93.636	94.636	0.19827								0	0	0	0.56276	1	9517	9517		37.508	5.8739	1		+		37870	18998	25238	25250	43203	43203					0.0643705136067183
NIVNLQELVSA	11	Unmodified	_NIVNLQELVSA_					0	0	0			REV__ENSG00000132361|ENST00000651024|CLUH	REV__ENSG00000132361|ENST00000651024|CLUH	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	600.3333129882812	2	600.335153	1198.65575	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.455	1	94.653	94.153	95.153	0.19827								0	0	0	0.56276	1	9593	9593		45.022	3.5956	1		+		37871	18998	25238	25250	43204	43204					0.0643705136067183
NIVNSPLMIIT	11	Unmodified	_NIVNSPLMIIT_					0	0	0			REV__ENSG00000166926|ENST00000684409|MS4A6E	REV__ENSG00000166926|ENST00000684409|MS4A6E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5641784667969	3	405.565291	1213.67404	-0.18878	-7.6562E-05	-1.0256	-0.00041594	-1.2143	-0.0004925	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.67762	1	5912	5912		35.178	1.0917	1	257140	+		37872	21340	25239	25251	43205	43205					0.0757547001101102
NIVNSPLMIIT	11	Unmodified	_NIVNSPLMIIT_					0	0	0			REV__ENSG00000166926|ENST00000684409|MS4A6E	REV__ENSG00000166926|ENST00000684409|MS4A6E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5644836425781	3	405.565291	1213.67404	-0.19603	-7.9504E-05	-1.2042	-0.00048838	-1.4002	-0.00056788	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.74022	1	6050	6050		24.232	0.85391	1	328790	+		37873	21340	25239	25251	43206	43206					0.0757547001101102
NIVNSPLMIIT	11	Unmodified	_NIVNSPLMIIT_					0	0	0			REV__ENSG00000166926|ENST00000684409|MS4A6E	REV__ENSG00000166926|ENST00000684409|MS4A6E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.564697265625	3	405.565291	1213.67404	1.5319	0.00062128	-2.8676	-0.001163	-1.3358	-0.00054174	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.59831	1	5954	5954		44.639	9.4612	1	245170	+		37874	21340	25239	25251	43207	43207					0.0757547001101102
NIVNVFLLGT	10	Unmodified	_NIVNVFLLGT_					0	0	0			REV__ENST00000319074.5_1_14:23567332-23567638:+|nuORF	REV__ENST00000319074.5_1_14:23567332-23567638:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.31689453125	2	545.318774	1088.623	-0.33932	-0.00018504	-3.4934	-0.001905	-3.8327	-0.00209	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.80179	1	8992	8992		39.253	6.4404	1	4710900	+		37875	24981	25240	25252	43208	43208					0.08222889028502323
NIVNVFLLGT	10	Unmodified	_NIVNVFLLGT_					0	0	0			REV__ENST00000319074.5_1_14:23567332-23567638:+|nuORF	REV__ENST00000319074.5_1_14:23567332-23567638:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3176879882812	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.86218	1	10221	10221		32.812	4.9302	1	4868200	+		37876	24981	25240	25252	43209	43209					0.08222889028502323
NIVQQVTR	8	Unmodified	_NIVQQVTR_					0	0	0			REV__ENSG00000176040|ENST00000452346|TMPRSS7	REV__ENSG00000176040|ENST00000452346|TMPRSS7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2778625488281	2	479.277441	956.540328	0.28639	0.00013726	-0.32449	-0.00015552	-0.038098	-1.826E-05	479.27712266759204	81.87	2.8073	82.296	80.642	83.45	0.42646					178	68	3	0	0	0	0.90523	1	9519	9519		40.778	5.1599	1	1790000	+		37877	22101	25241	25253	43210	43210					0.060319920203255606
NIVRLHDVL	9	Unmodified	_NIVRLHDVL_					0	0	0		ENSG00000164885|ENST00000485972|CDK5;nc|ENSG00000164885|Q00535-2|CDK5	ENSG00000164885|ENST00000485972|CDK5	ENSG00000164885|ENST00000485972|CDK5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.8256225585938	2	539.822015	1077.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.592	1	44.042	43.542	44.542	0.45025								0	0	0	0.29475	1	3951	3951		32.812	2.3088	1				37878	6016	25242	25254	43211	43211					0.09376826979860198
NIVVFRGTI	9	Unmodified	_NIVVFRGTI_					0	0	0		nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C;ENSG00000224960|ENST00000412172|PPP4R3C	nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8039855957031	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.73802	1	8344	8344		37.812	0.65241	1	2989000			37879	8704	25243	25255	43212	43212					0.08902039576867082
NIVVFRGTI	9	Unmodified	_NIVVFRGTI_					0	0	0		nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C;ENSG00000224960|ENST00000412172|PPP4R3C	nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8051452636719	2	509.805834	1017.59712	-0.23209	-0.00011832	-3.4044	-0.0017356	-3.6365	-0.0018539	509.8040269548471	84.32	2.2366	84.755	83.379	85.615	0.43538					129	54	3	0	0	0	0.41566	1	9809	9809		56.721	5.3856	1	819870			37880	8704	25243	25255	43213	43213					0.08902039576867082
NIVVKTVEM	9	Unmodified	_NIVVKTVEM_					0	0	0		ENSG00000131095|ENST00000588735|GFAP	ENSG00000131095|ENST00000588735|GFAP	ENSG00000131095|ENST00000588735|GFAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7939453125	2	516.791535	1031.56852	-0.047502	-2.4548E-05	3.7971	0.0019623	3.7496	0.0019377	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.77696	1	9090	9090		31.53	3.6476	1	692890			37881	3715	25244	25256	43214	43214					0.05399553885399655
NIVVLSLSL	9	Unmodified	_NIVVLSLSL_					0	0	0		ENST00000551915.5_1_12:83081308-83379891:+|nuORF;ENSG00000179104|ENST00000321196|TMTC2	ENST00000551915.5_1_12:83081308-83379891:+|nuORF	ENST00000551915.5_1_12:83081308-83379891:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2773742675781	2	479.302593	956.590633	0.83421	0.00039984	-1.9506	-0.00093493	-1.1164	-0.00053509	479.30130023401904	84.948	0.12992	84.877	84.803	84.933	-0.07196					4	2	2	0	0	0	0.20789	1	8710	8710		26.693	11.051	1	28947			37882	7243	25245	25257	43215	43215					0.11060101625491825
NIWDILGIHSK	11	Unmodified	_NIWDILGIHSK_					0	0	0		ENSG00000102595|ENST00000376747|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.59771728515625	3	432.575067	1294.70337	2.4123	0.0010435	2.0587	0.00089054	4.4709	0.001934	432.57701177054753	106.21	0.78365	106.24	106.02	106.81	0.036888					23	17	2	0	0	0	0.1746	1	11639	11639		43.419	0	1	109060			37883	2011	25246	25258	43216	43216					0.06780750351504139
NIYNRSQPV	9	Unmodified	_NIYNRSQPV_					0	0	0		nc|ENSG00000197142|Q9ULC5-4|ACSL5;ENSG00000197142|ENST00000354655|ACSL5;nc|ENSG00000197142|Q9ULC5-3|ACSL5;ENST00000496328.1_1_10:114181742-114186129:+|nuORF	nc|ENSG00000197142|Q9ULC5-4|ACSL5	nc|ENSG00000197142|Q9ULC5-4|ACSL5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.162353515625	2	545.78563	1089.55671	-1.8272	-0.00099724	-2.4258	-0.001324	-4.253	-0.0023212	545.784120582942	39.596	0.80241	39.964	39.471	40.273	0.36797					24	18	2	0	0	0	0.20789	1	3283	3283		34.173	0	1	141970			37884	8140	25247	25259	43217	43217					0.015510731864196714
NIYPEYIL	8	Unmodified	_NIYPEYIL_					0	0	0		ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7686767578125	2	512.771126	1023.5277	-0.5023	-0.00025756	-3.8876	-0.0019934	-4.3899	-0.002251	512.7690290219534	48.59	1.7173	49.06	48.082	49.799	0.46941					100	42	5	0	0	0	0.92457	1	4731	4731		47.916	0.25827	1	5404400			37885	8058	25248	25260	43218	43218					0.016875358374250027
NKAAALQRRMS	11	Unmodified	_NKAAALQRRMS_					0	0	0		nc|ENSG00000111913|Q9Y4F9|RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2	nc|ENSG00000111913|Q9Y4F9|RIPOR2	nc|ENSG00000111913|Q9Y4F9|RIPOR2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	623.8712158203125	2	623.345863	1244.67717	0.78965	0.00049223	-3.6958	-0.0023038	-2.9062	-0.0018115	623.3439395621078	104.63	0.696	104.67	104.3	104.99	0.039856					38	16	3	0	0	0	0.17574	1	11439	11439		33.922	17.915	1	173090			37886	2625	25249	25261	43219	43219					0.06462157908390509
NKAAQILSTAS	11	Unmodified	_NKAAQILSTAS_					0	0	0			REV__nc|ENSG00000066032|P26232-4|CTNNA2	REV__nc|ENSG00000066032|P26232-4|CTNNA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3057250976562	2	552.306395	1102.59824	0.26261	0.00014504	-0.18156	-0.00010027	0.081052	4.4766E-05	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.61369	1	9422	9422		42.864	12.547	1	1950800	+		37887	16513	25250	25262	43220	43220					0.05104209155069839
NKAFVHIL	8	Unmodified	_NKAFVHIL_					0	0	0			REV__ENSG00000157778|ENST00000288607|PSMG3	REV__ENSG00000157778|ENST00000288607|PSMG3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.32861328125	2	471.281995	940.549437	-1.0024	-0.00047241	-1.173	-0.00055281	-2.1754	-0.0010252	471.2786826382119	58.475	0.87849	58.868	58.397	59.276	0.39209					43	20	4	0	0	0	0.4196	1	6166	6166		12.959	0	1	376500	+		37888	20563	25251	25263	43221	43221					0.0767838537666421
NKAGGPRDL	9	Unmodified	_NKAGGPRDL_					0	0	0		nc|ENSG00000115290|Q14449-2|GRB14;ENSG00000115290|ENST00000263915|GRB14	nc|ENSG00000115290|Q14449-2|GRB14	nc|ENSG00000115290|Q14449-2|GRB14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25384521484375	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.44421	1	8076	8076		54.776	1.4249	1	1603800			37889	2831	25252	25264	43222	43222					0.027191324691784757
NKAIIFMINLS	11	Unmodified	_NKAIIFMINLS_					0	0	0		ENSG00000078589|ENST00000171757|P2RY10	ENSG00000078589|ENST00000171757|P2RY10	ENSG00000078589|ENST00000171757|P2RY10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	632.3656616210938	2	632.360116	1262.70568	2.8299	0.0017895	-1.2832	-0.00081145	1.5467	0.00097805	632.3591459550191	103.07	0.58058	103.02	102.74	103.32	-0.047005					42	13	4	0	0	0	0.53361	1	11288	11288		49.536	10.283	1	4964300			37890	1402	25253	25265	43223	43223					0.08483462764979777
NKAIIFMINLS	11	Unmodified	_NKAIIFMINLS_					0	0	0		ENSG00000078589|ENST00000171757|P2RY10	ENSG00000078589|ENST00000171757|P2RY10	ENSG00000078589|ENST00000171757|P2RY10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	632.3637084960938	2	632.360116	1262.70568	1.2218	0.00077264	0.38543	0.00024373	1.6073	0.0010164	632.3601839093275	102.92	0.65614	102.96	102.66	103.32	0.04319					39	15	3	0	0	0	0.66929	1	11155	11155		36.447	0	1	4824500			37891	1402	25253	25265	43224	43224					0.08483462764979777
NKAIIFMINLS	11	Unmodified	_NKAIIFMINLS_					0	0	0		ENSG00000078589|ENST00000171757|P2RY10	ENSG00000078589|ENST00000171757|P2RY10	ENSG00000078589|ENST00000171757|P2RY10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	632.3716430664062	2	632.360116	1262.70568	0.93196	0.00058934	0.84189	0.00053238	1.7739	0.0011217	632.3603742027793	102.95	0.59602	103.08	102.81	103.4	0.12622					46	14	4	0	0	0	0.64498	1	10889	10889		39.253	0	1	10639000			37892	1402	25253	25265	43225	43225					0.08483462764979777
NKAIIFMINLS	11	Unmodified	_NKAIIFMINLS_					0	0	0		ENSG00000078589|ENST00000171757|P2RY10	ENSG00000078589|ENST00000171757|P2RY10	ENSG00000078589|ENST00000171757|P2RY10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	632.3634033203125	2	632.360116	1262.70568	-1.1839	-0.00074864	2.9438	0.0018616	1.7599	0.0011129	632.3616057727943	102.98	0.994	103.09	102.39	103.39	0.11495					58	24	4	0	0	0	0.64498	2	10794	10794;10805		39.253	1.4413	1	10467000			37893	1402	25253	25265	43226;43227	43226					0.08483462764979777
NKAIIRSK	8	Unmodified	_NKAIIRSK_					0	0	0			REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7720642089844	2	465.298176	928.581799	0.29991	0.00013955	-0.46682	-0.00021721	-0.16691	-7.7662E-05	465.2986333009142	22.853	0.2261	22.435	22.276	22.502	-0.41879					6	4	2	0	0	0	0.4196	1	964	964		17.365	10.629	1	15132	+		37894	22941	25254	25266	43228	43228					0.11465172779651311
NKAKAINFL	9	Unmodified	_NKAKAINFL_					0	0	0			REV__ENSG00000178473|ENST00000380433|UCN3	REV__ENSG00000178473|ENST00000380433|UCN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8038635253906	2	509.805834	1017.59712	-0.71562	-0.00036483	-2.7409	-0.0013973	-3.4566	-0.0017622	509.8042530749235	99.723	0.85551	99.723	99.348	100.2	0					47	20	3	0	0	0	0.7932	1	10076	10076		25.45	1.2474	1	277710	+		37895	22282	25255	25267	43229	43229					0.08902039576844345
NKAKKGPDAS	10	Unmodified	_NKAKKGPDAS_					0	0	0			REV__nc|ENSG00000124191|Q96NM4-3|TOX2	REV__nc|ENSG00000124191|Q96NM4-3|TOX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.2801208496094	2	508.28018	1014.54581	-0.055639	-2.828E-05	0.18106	9.2031E-05	0.12542	6.3751E-05	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.47091	3	8932	8932;8944;9078		58.23	1.8554	1	1918800	+		37896	18566	25256	25268	43230;43231;43232	43230					0.03911670812135526
NKAKKGPDAS	10	Unmodified	_NKAKKGPDAS_					0	0	0			REV__nc|ENSG00000124191|Q96NM4-3|TOX2	REV__nc|ENSG00000124191|Q96NM4-3|TOX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2796325683594	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.44803	3	9329	9245;9270;9329		60.118	16.001	1	1903500	+		37897	18566	25256	25268	43233;43234;43235	43235					0.03911670812135526
NKAKTERK	8	Unmodified	_NKAKTERK_					0	0	0			REV__ENST00000492798.1_1_9:136217794-136218218:+|nuORF	REV__ENST00000492798.1_1_9:136217794-136218218:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.79107666015625	2	487.790715	973.566878	-0.48923	-0.00023864	0.34108	0.00016637	-0.14815	-7.2268E-05	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.87064	1	9665	9665		29.15	0	1	1599600	+		37898	27679	25257	25269	43236	43236					0.07903680911658739
NKARKKCEF	9	Unmodified	_NKARKKCEF_					0	0	0			REV__ENSG00000172575|ENST00000310803|RASGRP1	REV__ENSG00000172575|ENST00000310803|RASGRP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.30615234375	2	562.305675	1122.5968	0.25151	0.00014143	-0.29114	-0.00016371	-0.039622	-2.2279E-05	562.30544290986	84.247	1.205	84.695	84.266	85.471	0.44736					97	29	5	0	0	0	0.64555	1	9878	9878		44.377	1.981	1	6511800	+		37899	21842	25258	25270	43237	43237					0.040402965853445494
NKARRSRSA	9	Unmodified	_NKARRSRSA_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3034057617188	2	523.302313	1044.59007	1.1688	0.00061163	1.2035	0.00062981	2.3723	0.0012414	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.76255	1	8975	8975		35.618	1.4457	1	12580000			37900	5245	25259	25271	43238	43238					0.0695611974899748
NKARRSRSA	9	Unmodified	_NKARRSRSA_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.303466796875	2	523.302313	1044.59007	-0.1734	-9.0741E-05	2.4058	0.001259	2.2324	0.0011682	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.64922	1	8836	8836		44.117	3.3386	1	13808000			37901	5245	25259	25271	43239	43239					0.0695611974899748
NKARRSRSA	9	Unmodified	_NKARRSRSA_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3034057617188	2	523.302313	1044.59007	0.60955	0.00031898	1.8704	0.00097876	2.4799	0.0012977	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.58668	1	10214	10214		47.657	3.2801	1	4023800			37902	5245	25259	25271	43240	43240					0.0695611974899748
NKARRSRSA	9	Unmodified	_NKARRSRSA_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3031616210938	2	523.302313	1044.59007	1.1935	0.00062456	1.2756	0.00066754	2.4691	0.0012921	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.69624	1	10597	10597		40.778	1.972	1	11944000			37903	5245	25259	25271	43241	43241					0.0695611974899748
NKASGPGYSV	10	Unmodified	_NKASGPGYSV_					0	0	0		ENST00000577781.1_1_3:186501651-186501927:-|nuORF	ENST00000577781.1_1_3:186501651-186501927:-|nuORF	ENST00000577781.1_1_3:186501651-186501927:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.264892578125	2	490.245806	978.47706	-1.4598	-0.00071565	-0.40885	-0.00020043	-1.8686	-0.00091609	490.2454838643037	39.814	0.72054	40.368	39.966	40.686	0.55449					35	16	3	0	0	0	0.37624	1	3335	3335		58.23	10.573	1	446040			37904	14072	25260	25272	43242	43242					-0.013039934875791914
NKAVNMRP	8	Oxidation (M)	_NKAVNM(Oxidation (M))RP_		NKAVNM(1)RP		NKAVNM(52)RP	0	0	1			REV__ENST00000420058.1_2_7:102628980-102629058:+|nuORF	REV__ENST00000420058.1_2_7:102628980-102629058:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.2481994628906	2	473.250369	944.486184	-0.51454	-0.00024351	-4.4298	-0.0020964	-4.9443	-0.0023399	473.24818540235697	28.981	1.8023	28.961	28.523	30.325	-0.019407					101	54	4	0	0	0	0.93529	1	1454	1454		52.299	9.4349	1	574970	+		37905	26482	25261	25273	43243	43243					0.011720765971176661
NKCAECVKP	9	Unmodified	_NKCAECVKP_					0	0	0			REV__ENSG00000145423|ENST00000274063|SFRP2	REV__ENSG00000145423|ENST00000274063|SFRP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.2374572753906	2	496.238612	990.462672	-1.7892	-0.00088786	0.85491	0.00042424	-0.93428	-0.00046363	496.2388858051541	30.95	0.59715	30.95	30.699	31.296	0					45	19	3	0	0	0	0.71772	1	1457	1457		39.253	3.6345	1	171020	+		37906	19945	25262	25274	43244	43244					-0.032941052317255526
NKCDVKRIA	9	Unmodified	_NKCDVKRIA_					0	0	0		nc|ENSG00000107937|Q9BZE4-3|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;ENSG00000107937|ENST00000360803|GTPBP4	nc|ENSG00000107937|Q9BZE4-3|GTPBP4	nc|ENSG00000107937|Q9BZE4-3|GTPBP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7937622070312	2	523.792401	1045.57025	0.20589	0.00010784	2.744	0.0014373	2.9499	0.0015451	523.7937468382506	19.848	1.1814	19.218	18.937	20.118	-0.6296					65	25	3	0	0	0	0.78536	1	585	585		29.15	1.2673	1	863270			37907	2380	25263	25275	43245	43245					0.04928607694000675
NKCKGIYY	8	Unmodified	_NKCKGIYY_					0	0	0		ENSG00000149050|ENST00000278314|ZNF214	ENSG00000149050|ENST00000278314|ZNF214	ENSG00000149050|ENST00000278314|ZNF214	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7531433105469	2	494.74967	987.484787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.399	1	68.527	68.027	69.027	0.12838								0	0	0	0.29694	1	6154	6154		37.028	1.4102	1				37908	4993	25264	25276	43246	43246					-0.009455574916501064
NKCKTFLTKLS	11	Unmodified	_NKCKTFLTKLS_					0	0	0			REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24	REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.3616333007812	2	641.863023	1281.71149	-1.1528	-0.00073992	-3.9183	-0.002515	-5.0711	-0.0032549	642.3621630712736	113.32	3.0307	113.27	113.24	116.27	-0.044777					170	68	3	0	0	0	0.58425	1	12268	12268		45.972	3.108	1	3139500	+		37909	18067	25265	25277	43247	43247					0.08190561276614972
NKDAALLEA	9	Unmodified	_NKDAALLEA_					0	0	0		nc|ENSG00000162129|Q9H078-3|CLPB;ENSG00000162129|ENST00000538039|CLPB;nc|ENSG00000162129|Q9H078|CLPB;ENST00000542555.1_1_11:72140095-72145182:-|nuORF	nc|ENSG00000162129|Q9H078-3|CLPB	nc|ENSG00000162129|Q9H078-3|CLPB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.75579833984375	2	472.756007	943.497461	-1.9914	-0.00094145	1.8703	0.00088421	-0.12108	-5.7242E-05	472.75680354138467	25.567	0.54731	25.567	25.286	25.834	0					40	25	2	0	0	0	0.67345	1	937	937		42.396	3.59	1	41084			37910	5670	25266	25278	43248	43248					0.02345177172219337
NKDGCSPS	8	Unmodified	_NKDGCSPS_					0	0	0			REV__ENST00000284617.6_1_1:229459666-229459729:-|nuORF	REV__ENST00000284617.6_1_1:229459666-229459729:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.17047119140625	2	404.16871	806.322867	0.53213	0.00021507	2.6453	0.0010691	3.1774	0.0012842	404.1699082116052	78.324	2.0905	78.461	78.03	80.121	0.13667					171	70	5	0	0	0	0.87479	1	7497	7497		30.504	1.3541	1	7251300	+		37911	24628	25267	25279	43249	43249					-0.08804146244585809
NKDGKLQKA	9	Unmodified	_NKDGKLQKA_					0	0	0			REV__nc|ENSG00000090061|O75909-2|CCNK	REV__nc|ENSG00000090061|O75909-2|CCNK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2909240722656	2	501.290548	1000.56654	-0.50774	-0.00025453	0.15503	7.7713E-05	-0.35272	-0.00017681	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.69624	1	8333	8333		40.778	5.1599	1	3014100	+		37912	16982	25268	25280	43250	43250					0.06628261191792717
NKDGKLQKA	9	Unmodified	_NKDGKLQKA_					0	0	0			REV__nc|ENSG00000090061|O75909-2|CCNK	REV__nc|ENSG00000090061|O75909-2|CCNK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.29022216796875	2	501.290548	1000.56654	-1.5697	-0.00078686	1.3648	0.00068414	-0.20492	-0.00010273	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.58668	1	8861	8861		47.657	1.7054	1	9242300	+		37913	16982	25268	25280	43251	43251					0.06628261191792717
NKDGKLQKA	9	Unmodified	_NKDGKLQKA_					0	0	0			REV__nc|ENSG00000090061|O75909-2|CCNK	REV__nc|ENSG00000090061|O75909-2|CCNK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29046630859375	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.71772	1	10328	10328		39.253	2.0937	1	9038000	+		37914	16982	25268	25280	43252	43252					0.06628261191792717
NKDKIGNITT	10	Unmodified	_NKDKIGNITT_					0	0	0			REV__ENST00000450418.1_1_3:4024502-4025426:-|nuORF	REV__ENST00000450418.1_1_3:4024502-4025426:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3062744140625	2	552.306395	1102.59824	0.78014	0.00043088	-0.74693	-0.00041253	0.033219	1.8347E-05	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.86218	1	9509	9509		32.812	2.4947	1	1841700	+		37915	26867	25269	25281	43253	43253					0.05104209155092576
NKDKTLEKHLK	11	Unmodified	_NKDKTLEKHLK_					0	0	0		nc|ENSG00000102384|Q92674-2|CENPI;chrX:101145199-101146153|62|27.95|0.99|4.82|+|ENST00000423383|CENPI,CENPI;chrX:101132456-101140666|61|26.26|0.92|4.84|+|ENST00000423383|CENPI,CENPI;chrX:101126798-101127138|57|22.54|0.62|5.19|+|ENST00000423383|CENPI,CENPI;chrX:101120450-101120738|58|29.4|0.83|5.15|+|ENST00000423383|CENPI,CENPI;chrX:101109998-101120402|58|33.24|0.98|5.09|+|ENST00000423383|CENPI,CENPI;ENSG00000102384|ENST00000682095|CENPI	nc|ENSG00000102384|Q92674-2|CENPI	nc|ENSG00000102384|Q92674-2|CENPI	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9324645996094	3	451.933143	1352.7776	0.73764	0.00033337	-1.7723	-0.00080097	-1.0347	-0.00046761	451.932241061631	98.904	2.3627	99.06	97.538	99.901	0.15659					136	54	4	0	0	0	0.76668	1	10348	10348		18.332	0.86365	1	302530			37916	535	25270	25282	43254	43254					0.1153209344302013
NKDLNKVLHK	10	Unmodified	_NKDLNKVLHK_					0	0	0		nc|ENSG00000183814|Q5TKA1-3|LIN9;ENSG00000183814|ENST00000681046|LIN9;nc|ENSG00000183814|Q5TKA1-2|LIN9	nc|ENSG00000183814|Q5TKA1-3|LIN9	nc|ENSG00000183814|Q5TKA1-3|LIN9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.20867919921875	3	403.575178	1207.70371	1.2084	0.00048767	-2.215	-0.00089393	-1.0067	-0.00040626	403.57418438863476	86.023	1.314	86.467	85.989	87.303	0.44331					48	31	2	0	0	0	0.37624	1	9993	9993		13.508	1.0751	1	199070			37917	7565	25271	25283	43255	43255					0.10816170071370834
NKDQLIRA	8	Unmodified	_NKDQLIRA_					0	0	0		ENST00000584205.5_1_17:17891793-17931952:-|nuORF;ENST00000462733.5_1_17:17924548-17931952:-|nuORF;ENST00000585101.5_1_17:17919555-17931952:-|nuORF;ENST00000488753.1_1_17:17924276-17929760:-|nuORF;ENSG00000171953|ENST00000474627|ATPAF2	ENST00000584205.5_1_17:17891793-17931952:-|nuORF	ENST00000584205.5_1_17:17891793-17931952:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2783203125	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.88601	1	7725	7725		34.173	0	1	1785900			37918	14130	25272	25284	43256	43256					0.06031992020314192
NKDSHDQH	8	Unmodified	_NKDSHDQH_					0	0	0			REV__nc|ENSG00000122966|O14578|CIT	REV__nc|ENSG00000122966|O14578|CIT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.7135925292969	2	490.712662	979.410771	1.1619	0.00057018	0.61372	0.00030116	1.7756	0.00087133	490.7130625039328	98.889	1.7535	99.25	98.566	100.32	0.36136					108	43	4	0	0	0	0.89043	1	11910	11910		35.618	0	1	2946000	+		37919	18521	25273	25285	43257	43257					-0.07975809329616368
NKEFGGSLI	9	Unmodified	_NKEFGGSLI_					0	0	0			REV__ENSG00000090857|ENST00000288050|PDPR	REV__ENSG00000090857|ENST00000288050|PDPR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.7599792480469	2	482.758549	963.502546	-1.3341	-0.00064404	1.4473	0.00069871	0.11325	5.4673E-05	482.75905253542953	46.526	0.72075	47.449	47.151	47.871	0.92315					29	16	2	0	0	0	0.51592	1	4396	4396		51.193	5.2407	1	1954600	+		37920	16996	25274	25286	43258	43258					0.019334810348709652
NKEFKNAL	8	Unmodified	_NKEFKNAL_					0	0	0		ENSG00000178586|ENST00000641019|OR6B3	ENSG00000178586|ENST00000641019|OR6B3	ENSG00000178586|ENST00000641019|OR6B3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	482.2674560546875	2	482.266542	962.51853	0.81049	0.00039087	2.209	0.0010653	3.0194	0.0014562	482.2672746752671	22.365	0.65388	22.429	22.063	22.717	0.064745					38	23	2	0	0	0	0.87064	1	666	666		29.15	0	1	39353			37921	7213	25275	25287	43259	43259					0.03577187271753246
NKEGTLVFSE	10	Unmodified	_NKEGTLVFSE_					0	0	0			REV__ENST00000588883.5_1_19:44679604-44681824:+|nuORF	REV__ENST00000588883.5_1_19:44679604-44681824:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.2876586914062	2	562.285128	1122.5557	-0.14594	-8.2059E-05	2.8601	0.0016082	2.7142	0.0015262	562.2865603679315	63.403	0.99493	63.79	63.402	64.397	0.38779					51	22	3	0	0	0	0.77314	1	6852	6852		40.778	1.5253	1	480010	+		37922	29151	25276	25288	43260	43260					-0.0006718597312556085
NKEIKGAL	8	Unmodified	_NKEIKGAL_					0	0	0		ENSG00000183303|ENST00000329434|OR5P2;ENSG00000182334|ENST00000641167|OR5P3	ENSG00000183303|ENST00000329434|OR5P2	ENSG00000183303|ENST00000329434|OR5P2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7635803222656	2	436.763635	871.512717	0.46701	0.00020397	0.17357	7.581E-05	0.64058	0.00027978	436.7635183439704	26.23	1.3576	26.275	25.815	27.173	0.045509					57	40	2	0	0	0	0.79403	1	1097	1097		63.306	2.3343	1	139010			37923	7518	25277	25289	43261	43261					0.071820887600893
NKEIKKTAN	9	Unmodified	_NKEIKKTAN_					0	0	0		nc|ENSG00000111450|P32856-2|STX2;nc|ENSG00000111450|P32856-3|STX2;ENSG00000111450|ENST00000392373|STX2	nc|ENSG00000111450|P32856-2|STX2	nc|ENSG00000111450|P32856-2|STX2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3037719726562	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.69624	1	8931	8931		40.778	2.9666	1	9288900			37924	14844	25278	25290	43262	43262					0.07224530363282611
NKEIWTSSP	9	Unmodified	_NKEIWTSSP_					0	0	0		ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.266845703125	2	531.266739	1060.51892	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.309	1	36.309	35.809	36.809	0								0	0	0	0.36353	1	2094	2094		49.442	5.0644	1				37925	1446	25279	25291	43263	43263					-0.008914377990549838
NKEKDPKPTT	10	Unmodified	_NKEKDPKPTT_					0	0	0			REV__ENSG00000038219|ENST00000040738|BOD1L1	REV__ENSG00000038219|ENST00000040738|BOD1L1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	579.8441772460938	2	579.311677	1156.6088	0.67636	0.00039182	0.39402	0.00022826	1.0704	0.00062008	579.3121301576039	102.03	1.0475	102.22	101.93	102.98	0.19484					51	25	3	0	0	0	0.37624	1	10834	10834		36.447	9.7538	1	259210	+		37926	16300	25280	25292	43264	43264					0.036761918094953216
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.30950927734375	3	496.975565	1487.90486	-0.54323	-0.00026997	-1.017	-0.0005054	-1.5602	-0.00077538	496.9747850532545	108.84	0.91086	108.97	108.39	109.3	0.13026					43	23	2	0	0	0	0.72374	1	11710	11710		27.644	9.8108	1	780160	+		37927	27650	25281	25293	43265	43265					0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.30950927734375	3	496.975565	1487.90486	-0.54323	-0.00026997	-1.017	-0.0005054	-1.5602	-0.00077538	496.9747850532545	108.84	0.91086	108.97	108.39	109.3	0.13026					43	23	2	0	0	0	0.17835	1	11710	11710		27.644	21.945	1	780160	+		37928	27650	25281	25293	43266	43266					0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	496.97503662109375	3	496.975565	1487.90486	0.79987	0.00039751	-3.0957	-0.0015385	-2.2958	-0.001141	496.9739156401331	107.88	0.79375	107.96	107.22	108.01	0.084412					53	19	5	0	0	0	0.74771	1	11594	11594		22.562	8.4756	1	74051000	+		37929	27650	25281	25293	43267	43267					0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	496.975565	1487.90486	-0.73336	-0.00036446	-1.4628	-0.00072699	-2.1962	-0.0010914	496.97476722782056	107.82	0.85641	107.82	106.98	107.83	0	-0.085065	0.0019184	NaN	22.562	55	20	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46392000	+		37930	27650	25281	25293							0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	496.975565	1487.90486	-0.73357	-0.00036457	0.19396	9.6393E-05	-0.53961	-0.00026817	497.3105128740408	108.68	0.43679	108.68	108.47	108.91	0	-0.21344	0.0019832	NaN	27.644	31	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	668560	+		37931	27650	25281	25293							0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	496.975565	1487.90486	-0.070418	-3.4996E-05	-3.1813	-0.001581	-3.2517	-0.001616	496.97385082742016	107.91	0.27552	107.87	107.65	107.93	-0.042404	-0.037052	-0.00064368	NaN	22.562	21	6	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37023000	+		37932	27650	25281	25293							0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	496.975565	1487.90486	-0.070368	-3.4971E-05	-1.4163	-0.00070387	-1.4867	-0.00073884	497.30985776345483	108.98	0.35252	108.93	108.77	109.12	-0.049332	0.045512	-0.00041762	NaN	27.644	31	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	841600	+		37933	27650	25281	25293							0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	496.975565	1487.90486	2.8565	0.0014196	-5.4171	-0.0026922	-2.5606	-0.0012726	496.97278570379865	107.89	0.64963	107.86	107.27	107.92	-0.031487	-0.039511	-0.0039772	NaN	22.562	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57502000	+		37934	27650	25281	25293							0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	496.975565	1487.90486	-0.48315	-0.00024012	-1.5706	-0.00078053	-2.0537	-0.0010206	496.97469849466864	107.88	0.86302	107.92	107.11	107.97	0.035622	0.013612	0.0017578	NaN	22.562	47	20	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54287000	+		37935	27650	25281	25293							0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	496.975565	1487.90486	-0.49047	-0.00024375	-0.7829	-0.00038908	-1.2734	-0.00063283	497.310103576564	108.83	0.22247	108.87	108.81	109.03	0.034355	-0.021729	0.00052675	NaN	27.644	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	512060	+		37936	27650	25281	25293							0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	496.975565	1487.90486	-0.5414	-0.00026906	-2.4583	-0.0012217	-2.9997	-0.0014908	496.97423369154825	107.84	0.67088	107.98	107.4	108.07	0.13866	0.075064	0.00043417	NaN	22.562	43	16	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77995000	+		37937	27650	25281	25293							0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	496.975565	1487.90486	0.79987	0.00039751	-3.0957	-0.0015385	-2.2958	-0.001141	496.9739156401331	107.88	0.79375	107.96	107.22	108.01	0.084412	0.057259	-0.0005161	NaN	22.562	53	19	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74051000	+		37938	27650	25281	25293							0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	496.975565	1487.90486	0.79965	0.00039741	-2.6041	-0.0012942	-1.8045	-0.00089678	497.30880984834357	108.92	0.26891	108.99	108.78	109.05	0.078552	0.10537	-0.0021886	NaN	27.644	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	778280	+		37939	27650	25281	25293							0.18042859107890763
NKELKRRLRYL	11	Unmodified	_NKELKRRLRYL_					0	0	0			REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	REV__ENST00000491144.5_1_3:183855641-183858240:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	496.975565	1487.90486	-1.6248	-0.0008075	-0.37848	-0.0001881	-2.0033	-0.0009956	496.9752673113776	107.88	0.83681	107.92	107.14	107.97	0.036125	0.015693	0.0035351	NaN	22.562	45	20	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51405000	+		37940	27650	25281	25293							0.18042859107890763
NKENSEQPQ	9	Unmodified	_NKENSEQPQ_					0	0	0		nc|ENSG00000096070|Q9ULD4-3|BRPF3;nc|ENSG00000096070|Q9ULD4-2|BRPF3;ENSG00000096070|ENST00000357641|BRPF3	nc|ENSG00000096070|Q9ULD4-3|BRPF3	nc|ENSG00000096070|Q9ULD4-3|BRPF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.314453125	2	537.246535	1072.47852	-0.33495	-0.00017995	-4.3201	-0.0023209	-4.655	-0.0025009	537.243634382164	49.381	0.49144	49.841	49.582	50.073	0.45983					17	11	2	0	0	0	0.20789	1	4831	4831		40.778	0	1	189070			37941	1738	25282	25294	43268	43268					-0.05482404189478984
NKERKLKVMK	10	Unmodified	_NKERKLKVMK_					0	0	0			REV__nc|ENSG00000261371|P16284-5|PECAM1	REV__nc|ENSG00000261371|P16284-5|PECAM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.31561279296875	3	425.263947	1272.77001	0.25038	0.00010648	-1.0993	-0.0004675	-0.84894	-0.00036102	425.2626463939302	20.16	0.3219	19.531	19.305	19.627	-0.6296					9	6	2	0	0	0	0.37624	1	611	611		15.333	5.2292	1	21653	+		37942	23944	25283	25295	43269	43269					0.14453662641744813
NKEVKGALKRG	11	Unmodified	_NKEVKGALKRG_					0	0	0		ENSG00000180042|ENST00000572493|OR1R1P	ENSG00000180042|ENST00000572493|OR1R1P	ENSG00000180042|ENST00000572493|OR1R1P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5804443359375	3	400.578811	1198.7146	3.4037	0.0013634	1.0118	0.0004053	4.4155	0.0017688	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.74405	1	13683	13683		23.378	0.81632	1	5321000			37943	7312	25284	25296	43270	43270					0.12319572445653648
NKFKCHSG	8	Carbamidomethyl (C)	_NKFKC(Carbamidomethyl (C))HSG_	NKFKC(1)HSG		NKFKC(41)HSG		0	1	0		nc|ENSG00000130164|P01130-2|LDLR;nc|ENSG00000130164|P01130-3|LDLR;nc|ENSG00000130164|P01130-6|LDLR;nc|ENSG00000130164|P01130-4|LDLR;nc|ENSG00000130164|P01130-5|LDLR;ENSG00000130164|ENST00000558518|LDLR	nc|ENSG00000130164|P01130-2|LDLR	nc|ENSG00000130164|P01130-2|LDLR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.2362060546875	2	489.234719	976.454884	-0.22761	-0.00011136	3.7202	0.00182	3.4926	0.0017087	489.2364963124142	86.068	2.1429	86.511	85.703	87.846	0.44331					118	51	4	0	0	0	0.90465	1	10113	10113		40.573	6.4001	1	3099300			37944	3622	25285	25297	43271	43271	49				-0.03428496436970363
NKFLALVK	8	Unmodified	_NKFLALVK_					0	0	0			REV__ENST00000382293.7_1_9:706912-706960:+|nuORF	REV__ENST00000382293.7_1_9:706912-706960:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.7975769042969	2	466.80002	931.585488	-2.0963	-0.00097857	-2.8224	-0.0013175	-4.9187	-0.0022961	466.79854136992486	18.836	0.83793	18.836	18.709	19.547	0					67	29	3	0	0	0	0.85277	1	345	345		25.45	0	1	190850	+		37945	25976	25286	25298	43272	43272					0.11695842553513103
NKFLHWSVGIL	11	Unmodified	_NKFLHWSVGIL_					0	0	0			REV__ENST00000396049.4_1_2:74383723-74383759:-|nuORF	REV__ENST00000396049.4_1_2:74383723-74383759:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.5856018066406	3	438.583674	1312.72919	0.18337	8.0422E-05	4.4218	0.0019393	4.6052	0.0020197	438.58559753259954	31.896	0.75173	31.879	31.582	32.334	-0.017466					85	36	4	0	0	0	0.71803	1	1474	1474		28.577	0.93281	1	379530	+		37946	26132	25287	25299	43273	43273					0.08533644593785539
NKFLVFKKKSD	11	Unmodified	_NKFLVFKKKSD_					0	0	0		ENSG00000147912|ENST00000432825|FBXO10;nc|ENSG00000147912|Q9UK96-2|FBXO10;ENST00000541804.1_1_9:37512546-37588833:-|nuORF	ENSG00000147912|ENST00000432825|FBXO10	ENSG00000147912|ENST00000432825|FBXO10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.93267822265625	3	451.934484	1352.78162	-0.99129	-0.000448	-2.9992	-0.0013554	-3.9905	-0.0018034	451.9330862164875	100.92	2.2384	100.92	100.04	102.28	0					149	53	4	0	0	0	0.75779	1	10258	10258		20.315	0.28454	1	534780			37947	4930	25288	25300	43274	43274					0.1193418293673858
NKFNYTEF	8	Unmodified	_NKFNYTEF_					0	0	0		nc|ENSG00000106366|P05121-2|SERPINE1;ENSG00000106366|ENST00000223095|SERPINE1	nc|ENSG00000106366|P05121-2|SERPINE1	nc|ENSG00000106366|P05121-2|SERPINE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.7813720703125	2	531.748182	1061.48181	-0.43882	-0.00023334	-0.8105	-0.00043098	-1.2493	-0.00066433	531.7476316194119	60.652	0.28175	61.042	60.974	61.256	0.38945					10	7	2	0	0	0	0.4196	1	6444	6444		45.952	0	1	198880			37948	2293	25289	25301	43275	43275					-0.046471093448190004
NKFYSVTF	8	Unmodified	_NKFYSVTF_					0	0	0			REV__nc|ENSG00000115866|P14868-2|DARS1	REV__nc|ENSG00000115866|P14868-2|DARS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.7922668457031	2	503.255643	1004.49673	0.23581	0.00011867	2.2153	0.0011149	2.4511	0.0012335	503.2575038688702	68.605	0.70969	69.152	68.782	69.492	0.54693					24	16	2	0	0	0	0.4196	1	7615	7615		24.203	1.1603	1	132940	+		37949	18157	25290	25302	43276	43276					-0.005336174768103774
NKGESQYN	8	Unmodified	_NKGESQYN_					0	0	0		ENSG00000120051|ENST00000369704|CFAP58	ENSG00000120051|ENST00000369704|CFAP58	ENSG00000120051|ENST00000369704|CFAP58	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.2104187011719	2	470.211963	938.409374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.753	1	23.808	23.308	24.308	0.055487								0	0	0	0.29264	1	811	811		29.15	2.4566	1				37950	3110	25291	25303	43277	43277					-0.06229443418385472
NKGGIKRSA	9	Unmodified	_NKGGIKRSA_					0	0	0		ENSG00000196422|ENST00000356818|PPP1R26	ENSG00000196422|ENST00000356818|PPP1R26	ENSG00000196422|ENST00000356818|PPP1R26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.77734375	2	465.777608	929.540663	-0.11871	-5.5291E-05	0.041983	1.9555E-05	-0.076723	-3.5736E-05	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.77696	1	8267	8267		31.53	2.3803	1	1083800			37951	8052	25292	25304	43278	43278					0.07307411740168845
NKGKFFLS	8	Unmodified	_NKGKFFLS_					0	0	0			REV__ENST00000536441.6_2_11:94905351-94905537:-|nuORF	REV__ENST00000536441.6_2_11:94905351-94905537:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7662658691406	2	470.766178	939.517802	-1.9239	-0.00090572	1.9879	0.00093583	0.06397	3.0115E-05	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.85277	1	1397	1397		25.45	4.9683	1	93177	+		37952	28407	25293	25305	43279	43279					0.04562392622710831
NKGKRGLTG	9	Unmodified	_NKGKRGLTG_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7773132324219	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.552	1	79.683	79.183	80.183	0.13086								0	0	0	0.36353	1	7548	7548		49.442	8.8689	1		+		37953	22445	25294	25306	43280	43280					0.07307411740180214
NKGLIKRIHE	10	Unmodified	_NKGLIKRIHE_					0	0	0			REV__nc|ENSG00000131368|P82663-2|MRPS25	REV__nc|ENSG00000131368|P82663-2|MRPS25	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3634643554688	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.98	1	117.01	116.51	117.51	0.026466								0	0	0	0.45132	1	12855	12855		15.642	1.5047	1		+		37954	18944	25295	25307	43281	43281					0.12459876308275852
NKGLRLAQ	8	Unmodified	_NKGLRLAQ_					0	0	0		ENSG00000164946|ENST00000380880|FREM1;nc|ENSG00000164946|Q5H8C1-2|FREM1	ENSG00000164946|ENST00000380880|FREM1	ENSG00000164946|ENST00000380880|FREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.27532958984375	2	450.274701	898.534849	-1.7762	-0.00079979	1.8456	0.00083102	0.069358	3.123E-05	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.884	1	12150	12150		33.516	6.7195	1	2494900			37955	6029	25296	25308	43282	43282					0.08152313228515595
NKGNMALAGTA	11	Unmodified	_NKGNMALAGTA_					0	0	0		ENSG00000162771|ENST00000294829|GARIN4	ENSG00000162771|ENST00000294829|GARIN4	ENSG00000162771|ENST00000294829|GARIN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2672119140625	2	524.266216	1046.51788	-1.6385	-0.00085901	4.1548	0.0021782	2.5163	0.0013192	524.268359892054	42.359	0.65334	43.057	42.81	43.463	0.69754					28	15	3	0	0	0	0.36477	1	3802	3802		62.107	4.2961	1	1803800			37956	5734	25297	25309	43283	43283					-0.0035197543959384348
NKGPKQLEEI	10	Unmodified	_NKGPKQLEEI_					0	0	0			REV__ENSG00000187889|ENST00000343433|FYB2	REV__ENSG00000187889|ENST00000343433|FYB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.32080078125	2	578.322045	1154.62954	-0.93946	-0.00054331	-1.4962	-0.00086527	-2.4356	-0.0014086	578.3213367494404	92.536	2.9581	92.605	91.391	94.349	0.06987					167	69	3	0	0	0	0.60985	1	9618	9618		49.536	15.364	1	393420	+		37957	22959	25298	25310	43284	43284					0.058407821891933054
NKGPPTPALLV	11	Unmodified	_NKGPPTPALLV_					0	0	0			REV__ENSG00000142025|ENST00000269945|DMRTC2	REV__ENSG00000142025|ENST00000269945|DMRTC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8297119140625	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.66929	1	9145	9145		36.447	0	1	1489800	+		37958	19719	25299	25311	43285	43285					0.10094577919790026
NKGPSGKKK	9	Unmodified	_NKGPSGKKK_					0	0	0		ENST00000508970.1_1_2:79924974-80004158:+|nuORF;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;ENSG00000066032|ENST00000402739|CTNNA2	ENST00000508970.1_1_2:79924974-80004158:+|nuORF	ENST00000508970.1_1_2:79924974-80004158:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28759765625	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.7932	1	10538	10538		20.947	0.4651	1	50843000			37959	1148	25300	25312	43286	43286					0.0874858239999412
NKGPSGKKK	9	Unmodified	_NKGPSGKKK_					0	0	0		ENST00000508970.1_1_2:79924974-80004158:+|nuORF;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;ENSG00000066032|ENST00000402739|CTNNA2	ENST00000508970.1_1_2:79924974-80004158:+|nuORF	ENST00000508970.1_1_2:79924974-80004158:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28680419921875	2	472.287808	942.561064	-1.7052	-0.00080535	2.0866	0.00098547	0.38138	0.00018012	472.2887688366916	99.113	1.9296	99.299	98.808	100.74	0.18582					95	44	3	0	0	0	0.69624	1	10294	10294		40.778	1.5253	1	583920			37960	1148	25300	25312	43287	43287					0.0874858239999412
NKGPSRIK	8	Unmodified	_NKGPSRIK_					0	0	0			REV__ENSG00000083635|ENST00000379161|NUFIP1	REV__ENSG00000083635|ENST00000379161|NUFIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2742919921875	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.87922	2	9713	9713;9932		31.955	3.7006	1	51698000	+		37961	16857	25301	25313	43288;43289	43288					0.08152313228515595
NKGPSRIK	8	Unmodified	_NKGPSRIK_					0	0	0			REV__ENSG00000083635|ENST00000379161|NUFIP1	REV__ENSG00000083635|ENST00000379161|NUFIP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.7537536621094	2	450.274701	898.534849	0.10084	4.5408E-05	-0.23817	-0.00010724	-0.13732	-6.1832E-05	450.27450629248625	81.796	1.4541	82.295	81.744	83.198	0.49966					52	35	2	0	0	0	0.4196	1	9416	9416		21.96	4.5949	1	285200	+		37962	16857	25301	25313	43290	43290					0.08152313228515595
NKGRVSVVH	9	Unmodified	_NKGRVSVVH_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.7535095214844	2	498.290882	994.567212	-0.0069912	-3.4836E-06	-3.4866	-0.0017374	-3.4936	-0.0017408	498.2888809652164	36.143	0.81567	36.425	36.115	36.931	0.28173					40	19	3	0	0	0	0.20789	1	2794	2794		24.203	1.1603	1	656210	+		37963	16141	25302	25314	43291	43291					0.06971100631517402
NKHGYQVDG	9	Unmodified	_NKHGYQVDG_					0	0	0		nc|ENSG00000170615|P58743-2|SLC26A5;nc|ENSG00000170615|P58743-5|SLC26A5;nc|ENSG00000170615|P58743-6|SLC26A5;ENSG00000170615|ENST00000306312|SLC26A5;nc|ENSG00000170615|P58743-3|SLC26A5	nc|ENSG00000170615|P58743-2|SLC26A5	nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7552185058594	2	509.241055	1016.46756	0.48136	0.00024513	-1.5499	-0.00078928	-1.0686	-0.00054416	509.2400859712121	50.222	0.45278	50.669	50.473	50.926	0.44761					19	10	3	0	0	0	0.20789	1	4905	4905		14.137	0	1	282620			37964	6604	25303	25315	43292	43292					-0.04001761773088219
NKHKEGKS	8	Unmodified	_NKHKEGKS_					0	0	0			REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2535705566406	2	464.253966	926.493378	-0.76573	-0.00035549	0.99904	0.00046381	0.2333	0.00010831	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.87259	1	9634	9634		58.782	0.97068	1	1046600	+		37965	19963	25304	25316	43293	43293					0.027191324691898444
NKHKKHRKRRK	11	Unmodified	_NKHKKHRKRRK_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.9745788574219	3	505.990431	1514.94946	2.9405	0.0014879	-1.9233	-0.00097316	1.0173	0.00051473	505.9899848937778	107.89	0.1106	107.86	107.77	107.88	-0.031487					4	2	2	0	0	0	0.18238	1	11958	11958		5.6988	0	1	1570200			37966	3217	25305	25317	43294	43294					0.21258727764552532
NKHSPLLWDL	10	Unmodified	_NKHSPLLWDL_					0	0	0		ENST00000443739.6_1_7:143052905-143053253:-|nuORF	ENST00000443739.6_1_7:143052905-143053253:-|nuORF	ENST00000443739.6_1_7:143052905-143053253:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.7409362792969	3	408.224146	1221.65061	1.4399	0.00058779	2.3063	0.00094151	3.7462	0.0015293	408.5592073617073	24.115	0.42692	23.602	23.408	23.835	-0.51365					16	9	3	0	0	0	0.37624	1	1149	1149		14.086	0	1	24968			37967	11807	25306	25318	43295	43295					0.04864792288708486
NKIAALRN	8	Unmodified	_NKIAALRN_					0	0	0			REV__nc|ENSG00000126787|Q15398-1|DLGAP5	REV__nc|ENSG00000126787|Q15398-1|DLGAP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27423095703125	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.884	1	10127	10127		33.516	1.5607	1	51820000	+		37968	15599	25307	25319	43296	43296					0.08152313228504227
NKIADLCHT	9	Unmodified	_NKIADLCHT_					0	0	0		ENST00000452159.6_1_12:124114706-124118224:-|nuORF;nc|ENSG00000111361|Q14232-2|EIF2B1;ENSG00000111361|ENST00000424014|EIF2B1	ENST00000452159.6_1_12:124114706-124118224:-|nuORF	ENST00000452159.6_1_12:124114706-124118224:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7528991699219	2	507.755484	1013.49641	-0.78055	-0.00039633	-4.026	-0.0020442	-4.8066	-0.0024406	507.75333135770444	62.615	1.2565	63.002	62.534	63.791	0.3878					81	28	4	0	0	0	0.41566	1	6688	6688		56.721	1.9447	1	1463300			37969	2578	25308	25320	43297	43297					-0.009793604683068224
NKIDQLIVF	9	Unmodified	_NKIDQLIVF_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-10|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.316650390625	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.51307	1	10449	10449		51.335	5.3632	1	4868200			37970	14756	25309	25321	43298	43298					0.08222889028479585
NKIDRLVARLI	11	Unmodified	_NKIDRLVARLI_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|101|2|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|101|2|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|101|2|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.60162353515625	3	437.613744	1309.8194	0.57017	0.00024951	-2.8028	-0.0012265	-2.2326	-0.00097701	437.61239346664513	16.123	0.16072	16.099	16.005	16.165	-0.024035					12	6	2	0	0	0	0.17996	1	104	104		12.433	2.3289	1	109900			37971	14657	25310	25322	43299	43299					0.1768869392221859
NKIDRLVARLI	11	Unmodified	_NKIDRLVARLI_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|101|2|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|101|2|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|101|2|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	437.613744	1309.8194	-1.626	-0.00071156	-0.19498	-8.5326E-05	-1.821	-0.00079689	437.6135868805035	16.059	0.19775	16.107	15.987	16.185	0.047802	-0.017438	0.0012058	NaN	11.932	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66214			37972	14657	25310	25322							0.1768869392221859
NKIDRLVARLI	11	Unmodified	_NKIDRLVARLI_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|101|2|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|101|2|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|101|2|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	437.613744	1309.8194	0.016853	7.375E-06	-2.348	-0.0010275	-2.3311	-0.0010201	437.61256382238776	16.107	0.19332	16.167	16.084	16.278	0.059267	0.042639	-0.0016207	NaN	11.932	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77071			37973	14657	25310	25322							0.1768869392221859
NKIEDENEVK	10	Unmodified	_NKIEDENEVK_					0	0	0			REV__nc|ENSG00000154359|Q17RB8-2|LONRF1	REV__nc|ENSG00000154359|Q17RB8-2|LONRF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7851867675781	3	406.538458	1216.59355	2.0827	0.00084668	-0.38462	-0.00015636	1.698	0.00069032	406.53811918753524	32.793	0.63062	32.791	32.493	33.123	-0.0016327					31	15	3	0	0	0	0.37624	1	1877	1877		28.577	6.0151	1	84004	+		37974	20386	25311	25323	43300	43300					-0.00608719778347222
NKIEDENEVK	10	Unmodified	_NKIEDENEVK_					0	0	0			REV__nc|ENSG00000154359|Q17RB8-2|LONRF1	REV__nc|ENSG00000154359|Q17RB8-2|LONRF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853698730469	3	406.538458	1216.59355	0.1201	4.8826E-05	1.3582	0.00055216	1.4783	0.00060099	406.538807551222	32.715	0.24342	32.825	32.634	32.877	0.10991					22	10	3	0	0	0	0.37624	1	1543	1543		9.6461	2.2464	1	72078	+		37975	20386	25311	25323	43301	43301					-0.00608719778347222
NKIGQQVIIPR	11	Unmodified	_NKIGQQVIIPR_					0	0	0		ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37	ENSG00000135913|ENST00000258399|USP37	ENSG00000135913|ENST00000258399|USP37	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.592529296875	3	422.594461	1264.76155	-1.6251	-0.00068677	-2.683	-0.0011338	-4.3081	-0.0018206	422.59320288156465	57.283	1.5202	57.283	56.985	58.505	0					113	60	2	0	0	0	0.74405	1	5007	5007		23.378	4.1152	1	124120			37976	4064	25312	25324	43302	43302					0.13976431996798055
NKIGQQVIIPR	11	Unmodified	_NKIGQQVIIPR_					0	0	0		ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37	ENSG00000135913|ENST00000258399|USP37	ENSG00000135913|ENST00000258399|USP37	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5916748046875	3	422.594461	1264.76155	-1.8148	-0.00076692	-2.5717	-0.0010868	-4.3865	-0.0018537	422.59329421382927	53.398	1.1926	53.446	52.625	53.817	0.047802					97	42	3	0	0	0	0.74405	2	4337	4337;4352		23.378	3.3474	1	149080			37977	4064	25312	25324	43303;43304	43303					0.13976431996798055
NKIGQQVIIPR	11	Unmodified	_NKIGQQVIIPR_					0	0	0		ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37	ENSG00000135913|ENST00000258399|USP37	ENSG00000135913|ENST00000258399|USP37	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59307861328125	3	422.594461	1264.76155	0.31839	0.00013455	-3.8415	-0.0016234	-3.5231	-0.0014888	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.74405	1	4520	4520		23.378	2.3457	1	1249100			37978	4064	25312	25324	43305	43305					0.13976431996798055
NKIGQQVIIPR	11	Unmodified	_NKIGQQVIIPR_					0	0	0		ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37	ENSG00000135913|ENST00000258399|USP37	ENSG00000135913|ENST00000258399|USP37	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5926818847656	3	422.594461	1264.76155	-0.68255	-0.00028844	-2.817	-0.0011905	-3.4996	-0.0014789	422.59313934575044	54.378	2.61	54.329	53.535	56.145	-0.049271					161	81	4	0	0	0	0.74405	1	4546	4546		23.378	5.9099	1	1116400			37979	4064	25312	25324	43306	43306					0.13976431996798055
NKIGQQVIIPR	11	Unmodified	_NKIGQQVIIPR_					0	0	0		ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37	ENSG00000135913|ENST00000258399|USP37	ENSG00000135913|ENST00000258399|USP37	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.9277648925781	3	422.594461	1264.76155	-0.81678	-0.00034517	-3.5347	-0.0014938	-4.3515	-0.0018389	422.59284282323074	58.274	1.5988	58.267	57.538	59.137	-0.0074387					138	72	3	0	0	0	0.76251	1	5011	5011		19.263	1.0006	1	237230			37980	4064	25312	25324	43307	43307					0.13976431996798055
NKIGVGPPLD	10	Unmodified	_NKIGVGPPLD_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.2940368652344	2	505.287474	1008.5604	0.38234	0.00019319	-0.069261	-3.4997E-05	0.31308	0.0001582	505.2871058988587	17.657	0.52114	17.175	16.898	17.419	-0.48256					30	11	4	0	0	0	0.8608	1	309	309		34.173	2.6427	1	667610			37981	5333	25313	25325	43308	43308					0.056457429602687625
NKIIQLIF	8	Unmodified	_NKIIQLIF_					0	0	0		ENST00000552572.1_1_12:104388043-104390561:-|nuORF	ENST00000552572.1_1_12:104388043-104390561:-|nuORF	ENST00000552572.1_1_12:104388043-104390561:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.8168640136719	2	494.813128	987.611703	-0.19792	-9.7932E-05	3.2675	0.0016168	3.0696	0.0015189	494.81463010565506	31.524	0.47109	31.473	31.171	31.642	-0.051033					17	10	2	0	0	0	0.86288	1	1798	1798		26.796	1.3459	1	34078			37982	13684	25314	25326	43309	43309					0.11740111724998314
NKIKEKIRRLC	11	Unmodified	_NKIKEKIRRLC_					0	0	0		nc|ENSG00000062650|Q7Z5K2-2|WAPL;ENST00000489996.1_1_10:88226942-88232014:-|nuORF;ENSG00000062650|ENST00000298767|WAPL;nc|ENSG00000062650|Q7Z5K2-3|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.6233215332031	3	467.622134	1399.84457	-0.9763	-0.00045654	3.6179	0.0016918	2.6416	0.0012353	467.62378407363303	107.84	0.75049	107.98	107.28	108.03	0.13866					91	18	6	0	0	0	0.74002	1	11550	11550		24.276	3.2437	1	26120000			37983	14761	25315	25327	43310	43310					0.16064425453123476
NKIKEKIRRLC	11	Unmodified	_NKIKEKIRRLC_					0	0	0		nc|ENSG00000062650|Q7Z5K2-2|WAPL;ENST00000489996.1_1_10:88226942-88232014:-|nuORF;ENSG00000062650|ENST00000298767|WAPL;nc|ENSG00000062650|Q7Z5K2-3|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.6235046386719	3	467.622134	1399.84457	0.7713	0.00036068	2.3409	0.0010947	3.1122	0.0014554	467.623137961311	107.87	0.64194	107.95	107.37	108.01	0.084404					70	15	6	0	0	0	0.76384	1	11578	11578		18.966	0.43528	1	22591000			37984	14761	25315	25327	43311	43311					0.16064425453123476
NKILHCKRKQ	10	Unmodified	_NKILHCKRKQ_					0	0	0			REV__ENST00000338564.9_1_15:37393130-37393349:-|nuORF	REV__ENST00000338564.9_1_15:37393130-37393349:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3739013671875	2	634.374423	1266.73429	6.8434	0.0043413	-2.416	-0.0015326	4.4274	0.0028086	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.85958	1	13829	13829		15.642	0.77694	1	75725	+		37985	25223	25316	25328	43312	43312					0.11159625184768629
NKILHKNIR	9	Unmodified	_NKILHKNIR_					0	0	0		ENST00000368654.7_1_10:129913548-129913629:-|nuORF	ENST00000368654.7_1_10:129913548-129913629:-|nuORF	ENST00000368654.7_1_10:129913548-129913629:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.358642578125	2	568.356557	1134.69856	1.0228	0.00058133	1.8713	0.0010636	2.8941	0.0016449	568.3575565669531	58.195	0.65987	58.748	58.47	59.13	0.55323					25	15	2	0	0	0	0.69914	1	6104	6104		40.573	1.7665	1	344900			37986	10601	25317	25329	43313	43313					0.13659910999399472
NKILTLWN	8	Unmodified	_NKILTLWN_					0	0	0		nc|ENSG00000293032|Q6UXP3|TMEM14EP	nc|ENSG00000293032|Q6UXP3|TMEM14EP	nc|ENSG00000293032|Q6UXP3|TMEM14EP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.291015625	2	501.292559	1000.57057	0.16565	8.304E-05	-4.0766	-0.0020436	-3.911	-0.0019605	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.90983	1	9978	9978		42.396	1.618	1	2717900			37987	15350	25318	25330	43314	43314					0.07030350685511166
NKIRIISSD	9	Unmodified	_NKIRIISSD_					0	0	0			REV__nc|ENSG00000215421|Q9C0G0-3|ZNF407	REV__nc|ENSG00000215421|Q9C0G0-3|ZNF407	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3034057617188	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.64922	1	10450	10450		44.117	0	1	13160000	+		37988	23684	25319	25331	43315	43315					0.07224530363282611
NKISELQIQ	9	Unmodified	_NKISELQIQ_					0	0	0			REV__ENSG00000198785|ENST00000361820|GRIN3A	REV__ENSG00000198785|ENST00000361820|GRIN3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	536.803466796875	2	536.803488	1071.59242	0.51301	0.00027539	-0.57261	-0.00030738	-0.059603	-3.1995E-05	536.8030718305589	26.228	0.94922	26.274	25.931	26.88	0.045509					67	26	4	0	0	0	0.30689	1	1077	1077		64.207	4.089	1	672220	+		37989	23380	25320	25332	43316	43316					0.05949110643427957
NKITVPPSK	9	Unmodified	_NKITVPPSK_					0	0	0		nc|ENSG00000158769|Q9Y624-2|F11R	nc|ENSG00000158769|Q9Y624-2|F11R	nc|ENSG00000158769|Q9Y624-2|F11R	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.2993469238281	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.776	1	66.903	66.403	67.403	0.12649								0	0	0	0.29197	1	5946	5946		33.922	8.4715	1				37990	15028	25321	25333	43317	43317					0.08914333339942004
NKIVRIEKD	9	Unmodified	_NKIVRIEKD_					0	0	0		nc|ENSG00000089234|Q7Z569-2|BRAP;ENSG00000089234|ENST00000419234|BRAP	nc|ENSG00000089234|Q7Z569-2|BRAP	nc|ENSG00000089234|Q7Z569-2|BRAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.8294677734375	2	557.83258	1113.65061	0.35884	0.00020017	-3.5133	-0.0019598	-3.1545	-0.0017597	557.8305500141807	100.81	1.6091	101.01	100.54	102.15	0.2058					76	38	3	0	0	0	0.7932	1	10558	10558		25.574	5.5773	1	1006700			37991	1619	25322	25334	43318	43318					0.09832792288693781
NKIVRRHY	8	Unmodified	_NKIVRRHY_					0	0	0			REV__nc|ENSG00000046651|O75665-3|OFD1	REV__nc|ENSG00000046651|O75665-3|OFD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.3102416992188	2	543.319974	1084.6254	-0.54741	-0.00029742	-3.2135	-0.001746	-3.7609	-0.0020434	543.8191840087578	69.104	0.58418	69.651	69.324	69.908	0.54694					17	13	2	0	0	0	0.4196	1	7611	7611		33.516	10.936	1	276190	+		37992	16345	25323	25335	43319	43319					0.08646782276787235
NKKAKALDN	9	Unmodified	_NKKAKALDN_					0	0	0		ENSG00000182173|ENST00000333213|TSEN54	ENSG00000182173|ENST00000333213|TSEN54	ENSG00000182173|ENST00000333213|TSEN54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2905578613281	2	501.290548	1000.56654	-1.5697	-0.00078686	1.3648	0.00068414	-0.20492	-0.00010273	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.41566	1	8625	8625		56.721	5.3856	1	9242300			37993	7431	25324	25336	43320	43320					0.06628261191781348
NKKAKALDN	9	Unmodified	_NKKAKALDN_					0	0	0		ENSG00000182173|ENST00000333213|TSEN54	ENSG00000182173|ENST00000333213|TSEN54	ENSG00000182173|ENST00000333213|TSEN54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2904968261719	2	501.290548	1000.56654	-0.86867	-0.00043546	0.96116	0.00048182	0.092492	4.6365E-05	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.51592	2	9753	9753;9863		51.193	5.2204	1	2445400			37994	7431	25324	25336	43321;43322	43321					0.06628261191781348
NKKANQVVA	9	Unmodified	_NKKANQVVA_					0	0	0			REV__nc|ENSG00000139697|A3KN83-3|SBNO1	REV__nc|ENSG00000139697|A3KN83-3|SBNO1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.2662353515625	2	486.285266	970.555979	-0.087632	-4.2614E-05	-0.69797	-0.00033941	-0.78561	-0.00038203	486.2844893856318	88.088	1.2535	88.156	87.702	88.956	0.067711					45	29	2	0	0	0	0.20789	1	8891	8891		21.96	0	1	96975	+		37995	19562	25325	25337	43323	43323					0.06952278537369239
NKKAPKRKPTT	11	Unmodified	_NKKAPKRKPTT_					0	0	0			REV__nc|ENSG00000205571|Q16637-4|SMN1	REV__nc|ENSG00000205571|Q16637-4|SMN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8933715820312	2	634.893503	1267.77245	-0.0069402	-4.4063E-06	-1.6425	-0.0010428	-1.6494	-0.0010472	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.65746	1	11113	11113		37.812	1.3648	1	31286000	+		37996	21800	25326	25338	43324	43324					0.1492783437106482
NKKAPLYFLQ	10	Unmodified	_NKKAPLYFLQ_					0	0	0			REV__nc|ENSG00000185787|Q9UBU8|MORF4L1	REV__nc|ENSG00000185787|Q9UBU8|MORF4L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3546142578125	2	611.353148	1220.69174	0.85003	0.00051967	3.7876	0.0023156	4.6376	0.0028352	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.86218	1	9447	9447		32.812	0.85756	1	6836400	+		37997	30101	25327	25339	43325	43325					0.09022553328168215
NKKASYIN	8	Unmodified	_NKKASYIN_					0	0	0		ENST00000504701.5_1_5:130690355-130695031:+|nuORF	ENST00000504701.5_1_5:130690355-130695031:+|nuORF	ENST00000504701.5_1_5:130690355-130695031:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	469.2586364746094	2	469.258717	936.50288	0.57593	0.00027026	-0.18433	-8.6499E-05	0.3916	0.00018376	469.2584719664024	25.428	0.58886	25.479	25.19	25.779	0.050453					50	24	3	0	0	0	0.86677	2	1009	1003;1009		30.504	0	1	123140			37998	12910	25328	25340	43326;43327	43327					0.032089007547028814
NKKCSAVK	8	Unmodified	_NKKCSAVK_					0	0	0		ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A	ENSG00000131747|ENST00000423485|TOP2A	ENSG00000131747|ENST00000423485|TOP2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.5857849121094	2	439.249837	876.485122	1.143	0.00050206	-2.8183	-0.0012379	-1.6753	-0.00073588	439.24884098622096	31.82	0.84399	31.814	31.476	32.32	-0.0061474					44	19	3	0	0	0	0.4196	1	1769	1769		15.642	2.6826	1	138880			37999	3745	25329	25341	43328	43328					0.041938622282032156
NKKDPRSL	8	Unmodified	_NKKDPRSL_					0	0	0		nc|ENSG00000185238|O60678-2|PRMT3;ENSG00000185238|ENST00000331079|PRMT3	nc|ENSG00000185238|O60678-2|PRMT3	nc|ENSG00000185238|O60678-2|PRMT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774963378906	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.89043	1	7902	7902		35.618	1.4457	1	2142700			38000	7691	25330	25342	43329	43329					0.06031992020314192
NKKERVKSHL	10	Unmodified	_NKKERVKSHL_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8692626953125	2	619.870028	1237.7255	-0.30632	-0.00018988	-0.95589	-0.00059253	-1.2622	-0.00078241	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.80179	1	9850	9850		39.253	1.4413	1	2103100	+		38001	18645	25331	25343	43330	43330					0.11614974819940471
NKKERVKSHL	10	Unmodified	_NKKERVKSHL_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.869384765625	2	619.870028	1237.7255	-0.30615	-0.00018977	-0.58957	-0.00036546	-0.89572	-0.00055523	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.8545	1	10228	10228		36.447	2.2742	1	4796900	+		38002	18645	25331	25343	43331	43331					0.11614974819940471
NKKESDKLK	9	Unmodified	_NKKESDKLK_					0	0	0			REV__nc|ENSG00000143776|Q5VT25-3|CDC42BPA	REV__nc|ENSG00000143776|Q5VT25-3|CDC42BPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.3172607421875	2	545.316763	1088.61897	0.73643	0.00040159	-0.91435	-0.00049861	-0.17792	-9.7022E-05	545.316117867523	88.493	3.0395	88.643	86.614	89.654	0.15055					258	71	4	0	0	0	0.77696	1	8656	8656		31.53	3.2755	1	5181100	+		38003	19840	25332	25344	43332	43332					0.07820799534761136
NKKGIRDL	8	Unmodified	_NKKGIRDL_					0	0	0			REV__ENST00000568218.2_1_15:32605934-32606516:-|nuORF	REV__ENST00000568218.2_1_15:32605934-32606516:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2878723144531	2	472.287808	942.561064	1.4182	0.00066978	-1.3444	-0.00063493	0.07378	3.4846E-05	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.87922	1	11479	11479		31.955	2.8053	1	21289000	+		38004	17108	25333	25345	43333	43333					0.08748582399982752
NKKILVDYL	9	Unmodified	_NKKILVDYL_					0	0	0			REV__nc|ENSG00000257335|O43451-1|MGAM	REV__nc|ENSG00000257335|O43451-1|MGAM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3325805664062	2	553.334424	1104.6543	-1.4413	-0.00079751	-2.1828	-0.0012078	-3.6241	-0.0020053	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.7932	1	9909	9909		21.96	1.013	1	2490200	+		38005	23919	25334	25346	43334	43334					0.10615462062560255
NKKILVDYL	9	Unmodified	_NKKILVDYL_					0	0	0			REV__nc|ENSG00000257335|O43451-1|MGAM	REV__nc|ENSG00000257335|O43451-1|MGAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.3326416015625	2	553.334424	1104.6543	0.80706	0.00044658	-4.3792	-0.0024232	-3.5722	-0.0019766	553.3318451739801	96.663	1.8533	97.067	96.582	98.436	0.40451					128	44	4	0	0	0	0.77244	1	11672	11672		32.812	4.7309	1	3116400	+		38006	23919	25334	25346	43335	43335					0.10615462062560255
NKKIQIQRNP	10	Unmodified	_NKKIQIQRNP_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|74|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|74|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8695068359375	2	619.870028	1237.7255	-0.30632	-0.00018988	-0.95589	-0.00059253	-1.2622	-0.00078241	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.86218	1	9803	9803		32.812	0.85756	1	2103100	+		38007	29638	25335	25347	43336	43336					0.11614974819917734
NKKIQLGSKVH	11	Unmodified	_NKKIQLGSKVH_					0	0	0			REV__ENSG00000162889|ENST00000367103|MAPKAPK2	REV__ENSG00000162889|ENST00000367103|MAPKAPK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.9222106933594	3	417.922578	1250.7459	2.409	0.0010068	-3.2333	-0.0013513	-0.82426	-0.00034448	417.9211491012133	105.29	1.9486	105.45	104.96	106.91	0.15584					170	67	4	0	0	0	0.72374	1	12844	12844		27.644	4.266	1	526200	+		38008	20860	25336	25348	43337	43337					0.1305614547973164
NKKKANKSD	9	Unmodified	_NKKKANKSD_					0	0	0			REV__ENSG00000100393|ENST00000263253|EP300	REV__ENSG00000100393|ENST00000263253|EP300	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7938232421875	2	516.793455	1031.57236	-0.047501	-2.4548E-05	0.082016	4.2386E-05	0.034515	1.7837E-05	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.76764	1	9042	9042		34.173	8.7224	1	692890	+		38009	17187	25337	25349	43338	43338					0.057833597034687045
NKKKERTE	8	Unmodified	_NKKKERTE_					0	0	0		ENSG00000140044|ENST00000651602|JDP2;nc|ENSG00000140044|Q8WYK2-2|JDP2	ENSG00000140044|ENST00000651602|JDP2	ENSG00000140044|ENST00000651602|JDP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7931518554688	2	516.793455	1031.57236	1.5571	0.00080467	-1.5393	-0.0007955	0.017752	9.1739E-06	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.8347	1	9132	9132		23.042	0	1	834930			38010	4412	25338	25350	43339	43339					0.057833597034687045
NKKKISRCV	9	Unmodified	_NKKKISRCV_					0	0	0			REV__nc|ENSG00000015171|Q15326-6|ZMYND11	REV__nc|ENSG00000015171|Q15326-6|ZMYND11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.326904296875	2	538.323868	1074.63318	3.5618	0.0019174	2.7686	0.0014904	6.3303	0.0034078	538.3252790877391	103.43	1.149	103.39	103.04	104.18	-0.043755					64	27	3	0	0	0	0.78536	1	11327	11327		29.15	0	1	1012900	+		38011	16208	25339	25351	43340	43340					0.09885173482030041
NKKKKFKGR	9	Unmodified	_NKKKKFKGR_					0	0	0		ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3297119140625	2	567.366924	1132.7193	-1.2049	-0.00068362	0.63521	0.0003604	-0.56969	-0.00032322	567.3679611974582	93.013	0.2058	93.083	92.97	93.176	0.069862					6	4	2	0	0	0	0.20789	1	9633	9633		19.997	3.5236	1	44632			38012	6533	25340	25352	43341	43341					0.15824501379074718
NKKKPKRSRP	10	Unmodified	_NKKKPKRSRP_					0	0	0			REV__ENSG00000164778|ENST00000297375|EN2	REV__ENSG00000164778|ENST00000297375|EN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8693237304688	2	619.893838	1237.77312	1.2649	0.00078407	-4.3676	-0.0027075	-3.1028	-0.0019234	619.8896006616634	95.664	0.25314	95.895	95.675	95.928	0.23103					8	5	2	0	0	0	0.37624	1	9809	9809		23.523	6.8053	1	40859	+		38013	21114	25341	25353	43342	43342					0.163746738107875
NKKKQANL	8	Unmodified	_NKKKQANL_					0	0	0			REV__nc|ENSG00000145949|Q86YV6-2|MYLK4	REV__nc|ENSG00000145949|Q86YV6-2|MYLK4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28826904296875	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.18	1	116.16	115.66	116.66	-0.02433								0	0	0	0.29498	1	12860	12860		26.796	0	1		+		38014	19978	25342	25354	43343	43343					0.08748582399982752
NKKKRNNYL	9	Unmodified	_NKKKRNNYL_					0	0	0			REV__AluJo_dup50387|chr12:53460146-53460445:-|1.288601933345857|0.0025522745462867|8.98|62.0|9|3|sense	REV__AluJo_dup50387|chr12:53460146-53460445:-|1.288601933345857|0.0025522745462867|8.98|62.0|9|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3428955078125	2	589.343646	1176.67274	-0.40075	-0.00023618	-0.79332	-0.00046754	-1.1941	-0.00070372	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.76255	1	9133	9133		35.618	1.4457	1	4112500	+		38015	15382	25343	25355	43344	43344					0.09147016757151505
NKKKRNNYL	9	Unmodified	_NKKKRNNYL_					0	0	0			REV__AluJo_dup50387|chr12:53460146-53460445:-|1.288601933345857|0.0025522745462867|8.98|62.0|9|3|sense	REV__AluJo_dup50387|chr12:53460146-53460445:-|1.288601933345857|0.0025522745462867|8.98|62.0|9|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3425903320312	2	589.343646	1176.67274	-0.6745	-0.00039751	-0.65118	-0.00038377	-1.3257	-0.00078128	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.76255	1	9771	9771		35.618	5.3006	1	16185000	+		38016	15382	25343	25355	43345	43345					0.09147016757151505
NKKKRNNYL	9	Unmodified	_NKKKRNNYL_					0	0	0			REV__AluJo_dup50387|chr12:53460146-53460445:-|1.288601933345857|0.0025522745462867|8.98|62.0|9|3|sense	REV__AluJo_dup50387|chr12:53460146-53460445:-|1.288601933345857|0.0025522745462867|8.98|62.0|9|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3428344726562	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.78983	1	9590	9590		27.882	5.3026	1	17904000	+		38017	15382	25343	25355	43346	43346					0.09147016757151505
NKKLFLLEE	9	Unmodified	_NKKLFLLEE_					0	0	0			REV__ENST00000452408.1_1_6:28937434-28937611:-|nuORF	REV__ENST00000452408.1_1_6:28937434-28937611:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297729492188	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.78536	1	9132	9132		29.15	2.4566	1	11042000	+		38018	26895	25344	25356	43347	43347					0.0881915819995811
NKKLFLLEE	9	Unmodified	_NKKLFLLEE_					0	0	0			REV__ENST00000452408.1_1_6:28937434-28937611:-|nuORF	REV__ENST00000452408.1_1_6:28937434-28937611:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3298950195312	2	567.331882	1132.64921	-1.3957	-0.00079181	-1.9666	-0.0011157	-3.3623	-0.0019075	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.76255	1	8914	8914		35.618	4.0885	1	5956400	+		38019	26895	25344	25356	43348	43348					0.0881915819995811
NKKLKIGLTKS	11	Unmodified	_NKKLKIGLTKS_					0	0	0			REV__nc|ENSG00000169918|Q8TE49|OTUD7A	REV__nc|ENSG00000169918|Q8TE49|OTUD7A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.4033203125	2	615.40063	1228.78671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.41	1	43.36	42.86	43.86	-0.050308								0	0	0	0.56276	1	2987	2987		27.047	10.33	1		+		38020	21615	25345	25357	43349	43349					0.18146486799355444
NKKLKKSTDKD	11	Unmodified	_NKKLKKSTDKD_					0	0	0			REV__L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|57|1|sense	REV__L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|57|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30035400390625	3	435.589265	1303.74596	0.23992	0.00010451	1.7483	0.00076153	1.9882	0.00086604	435.5901152618818	72.035	0.24643	72.586	72.442	72.689	0.55008					8	5	2	0	0	0	0.17331	1	8077	8077		18.966	0	1	50443	+		38021	29463	25346	25358	43350	43350					0.10624100689074112
NKKLLSIFYAL	11	Unmodified	_NKKLLSIFYAL_					0	0	0			REV__ENST00000481981.1_1_1:229422256-229424499:+|nuORF	REV__ENST00000481981.1_1_1:229422256-229424499:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2677001953125	3	437.267463	1308.78056	-1.7045	-0.00074531	2.6828	0.0011731	0.97836	0.00042781	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.74405	1	4371	4371		23.378	1.5975	1	3449100	+		38022	27456	25347	25359	43351	43351					0.1385196856786024
NKKLLSRHRN	10	Unmodified	_NKKLLSRHRN_					0	0	0		nc|ENSG00000157617|Q9Y426-2|C2CD2;nc|ENSG00000157617|Q9Y426-3|C2CD2;ENSG00000157617|ENST00000380486|C2CD2	nc|ENSG00000157617|Q9Y426-2|C2CD2	nc|ENSG00000157617|Q9Y426-2|C2CD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75140380859375	3	422.589822	1264.74764	2.2127	0.00093506	4.3838	0.0018526	6.5965	0.0027876	422.5916105051874	77.572	0.33572	77.622	77.522	77.858	0.049698					19	15	2	0	0	0	0.37624	1	7611	7611		18.531	0	1	33596			38023	5442	25348	25360	43352	43352					0.12585199288355398
NKKLQSAAH	9	Unmodified	_NKKLQSAAH_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.8036804199219	2	498.78289	995.551228	0.33307	0.00016613	3.3827	0.0016872	3.7158	0.0018534	498.7845635956281	48.972	0.56754	49.877	49.646	50.214	0.90424					21	13	2	0	0	0	0.20789	1	4814	4814		19.997	0	1	337510	+		38024	20239	25349	25361	43353	43353					0.05327394394601015
NKKMEQIHK	9	Unmodified	_NKKMEQIHK_					0	0	0			REV__ENSG00000164142|ENST00000435205|FHIP1A	REV__ENSG00000164142|ENST00000435205|FHIP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	578.3209228515625	2	578.318783	1154.62301	0.63653	0.00036812	2.2593	0.0013066	2.8959	0.0016747	578.3203291077863	92.395	2.7513	92.44	91.342	94.093	0.045448					167	64	3	0	0	0	0.73802	1	9633	9633		37.812	8.2608	1	410610	+		38025	21038	25350	25362	43354	43354					0.05188565756816388
NKKMTGRKL	9	Unmodified	_NKKMTGRKL_					0	0	0		ENSG00000065328|ENST00000378714|MCM10;nc|ENSG00000065328|Q7L590|MCM10;chr10:13172480-13172625|53|17.04|0.28|5.91|+|ENST00000484800|MCM10,MCM10	ENSG00000065328|ENST00000378714|MCM10	ENSG00000065328|ENST00000378714|MCM10	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3270263671875	2	538.323868	1074.63318	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.53	1	114.5	114	115	-0.024452								0	0	0	0.31472	1	12691	12691		25.45	3.4903	1				38026	67	25351	25363	43355	43355					0.09885173482052778
NKKNITNLS	9	Unmodified	_NKKNITNLS_					0	0	0		nc|ENSG00000120868|O14727-5|APAF1;nc|ENSG00000120868|O14727-3|APAF1;nc|ENSG00000120868|O14727-4|APAF1;nc|ENSG00000120868|O14727-2|APAF1;ENSG00000120868|ENST00000551964|APAF1	nc|ENSG00000120868|O14727-5|APAF1	nc|ENSG00000120868|O14727-5|APAF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3145141601562	2	516.29583	1030.57711	-0.2585	-0.00013346	-0.29547	-0.00015255	-0.55396	-0.00028601	516.2955706460867	100.18	0.30307	100.39	100.16	100.46	0.21511					9	6	2	0	0	0	0.20789	1	10465	10465		39.253	11.371	1	33644			38027	3154	25352	25364	43356	43356					0.06304243846216195
NKKNLMRK	8	Unmodified	_NKKNLMRK_					0	0	0		ENST00000538217.1_1_12:66531677-66531719:-|nuORF	ENST00000538217.1_1_12:66531677-66531719:-|nuORF	ENST00000538217.1_1_12:66531677-66531719:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3139038085938	2	516.310761	1030.60697	2.7794	0.001435	3.1012	0.0016012	5.8806	0.0030362	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.87922	1	11057	11057		31.955	0.42505	1	67991000			38028	13461	25353	25365	43357	43357					0.09288904310574253
NKKNLMRK	8	Unmodified	_NKKNLMRK_					0	0	0		ENST00000538217.1_1_12:66531677-66531719:-|nuORF	ENST00000538217.1_1_12:66531677-66531719:-|nuORF	ENST00000538217.1_1_12:66531677-66531719:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3152465820312	2	516.310761	1030.60697	3.1012	0.0016012	3.1636	0.0016334	6.2648	0.0032346	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.87479	1	12912	12912		30.504	6.3009	1	1162600			38029	13461	25353	25365	43358	43358					0.09288904310574253
NKKNLVFVG	9	Unmodified	_NKKNLVFVG_					0	0	0			REV__ENSG00000125730|ENST00000245907|C3	REV__ENSG00000125730|ENST00000245907|C3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8036193847656	2	509.805834	1017.59712	-0.054339	-2.7702E-05	-4.0902	-0.0020852	-4.1445	-0.0021129	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.7932	1	8764	8764		24.203	2.2429	1	2906900	+	+	38030	18661	25354	25366	43359	43359					0.08902039576844345
NKKNPSPL	8	Unmodified	_NKKNPSPL_					0	0	0		ENST00000311151.9_2_8:26435550-26439510:+|nuORF	ENST00000311151.9_2_8:26435550-26439510:+|nuORF	ENST00000311151.9_2_8:26435550-26439510:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2595520019531	2	449.261259	896.507966	-0.72218	-0.00032445	-0.93186	-0.00041865	-1.654	-0.00074309	449.2606459805973	68.937	0.66402	68.9	68.558	69.222	-0.036957					45	25	2	0	0	0	0.89962	1	6674	6674		38.806	3.6054	1	202090			38031	9920	25355	25367	43360	43360					0.055572046173210765
NKKNPSPL	8	Unmodified	_NKKNPSPL_					0	0	0		ENST00000311151.9_2_8:26435550-26439510:+|nuORF	ENST00000311151.9_2_8:26435550-26439510:+|nuORF	ENST00000311151.9_2_8:26435550-26439510:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.25958251953125	2	449.261259	896.507966	0.32639	0.00014663	-2.4806	-0.0011144	-2.1542	-0.00096779	449.259982210285	72.745	0.71985	72.787	72.415	73.135	0.042114					49	31	2	0	0	0	0.86791	1	6993	6993		28.254	0.37203	1	206780			38032	9920	25355	25367	43361	43361					0.055572046173210765
NKKNPSPL	8	Unmodified	_NKKNPSPL_					0	0	0		ENST00000311151.9_2_8:26435550-26439510:+|nuORF	ENST00000311151.9_2_8:26435550-26439510:+|nuORF	ENST00000311151.9_2_8:26435550-26439510:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.26055908203125	2	449.261259	896.507966	-1.3066	-0.000587	0.0064579	2.9013E-06	-1.3001	-0.0005841	449.2609052127223	72.511	0.72772	72.643	72.306	73.033	0.13145					51	25	3	0	0	0	0.884	1	6656	6656		33.516	3.0119	1	221400			38033	9920	25355	25367	43362	43362					0.055572046173210765
NKKRDLPS	8	Unmodified	_NKKRDLPS_					0	0	0		ENST00000425217.5_2_12:117904834-117909018:-|nuORF	ENST00000425217.5_2_12:117904834-117909018:-|nuORF	ENST00000425217.5_2_12:117904834-117909018:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2773742675781	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.90089	1	8009	8009		39.253	1.4413	1	2142700			38034	11530	25356	25368	43363	43363					0.06031992020314192
NKKRKFQAN	9	Unmodified	_NKKRKFQAN_					0	0	0		L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|96|2|sense	L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|96|2|sense	L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|96|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3301391601562	2	567.330539	1132.64652	-0.51077	-0.00028978	-0.70581	-0.00040043	-1.2166	-0.0006902	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.74721	2	9359	9359;9371		37.159	12.64	1	11042000			38035	14668	25357	25369	43364;43365	43364					0.0855074758567298
NKKRKFQAN	9	Unmodified	_NKKRKFQAN_					0	0	0		L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|96|2|sense	L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|96|2|sense	L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|96|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.329833984375	2	567.330539	1132.64652	1.203	0.00068247	-1.0748	-0.00060977	0.12815	7.2702E-05	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.76255	1	10777	10777		35.618	0.41757	1	4990000			38036	14668	25357	25369	43366	43366					0.0855074758567298
NKKRKLQVNI	10	Unmodified	_NKKRKLQVNI_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|154|3|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|154|3|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|154|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.9345397949219	3	414.266456	1239.77754	-1.3614	-0.000564	2.4019	0.00099501	1.0404	0.00043102	414.2674727538844	41.618	0.63386	42.032	41.717	42.351	0.4139					36	16	3	0	0	0	0.37624	1	3635	3635		15.333	0	1	663600			38037	14660	25358	25370	43367	43367					0.16724138233712438
NKKRLVFF	8	Unmodified	_NKKRLVFF_					0	0	0			REV__ENSG00000164181|ENST00000508821|ELOVL7	REV__ENSG00000164181|ENST00000508821|ELOVL7	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3252563476562	2	526.324194	1050.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.561	1	54.553	54.053	55.053	-0.0077095								0	0	0	0.30784	1	4818	4818		14.664	0.88877	1		+		38038	21049	25359	25371	43368	43368					0.11054336193410563
NKKRLVYAR	9	Unmodified	_NKKRLVYAR_					0	0	0			REV__ENST00000552029.1_1_12:107380386-107380746:-|nuORF	REV__ENST00000552029.1_1_12:107380386-107380746:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.358154296875	2	574.356557	1146.69856	0.5994	0.00034427	-1.7354	-0.00099676	-1.136	-0.00065249	574.3554932610225	99.489	2.9336	99.712	98.122	101.06	0.22262					130	68	2	0	0	0	0.78983	1	10401	10401		27.882	0	1	294880	+		38039	28616	25360	25372	43369	43369					0.13107910999406158
NKKSEELI	8	Unmodified	_NKKSEELI_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.8007507324219	2	480.771657	959.528761	-0.54267	-0.0002609	-1.7085	-0.00082138	-2.2511	-0.0010823	480.7701629190424	95.222	0.45015	95.269	95.129	95.579	0.046982					16	10	2	0	0	0	0.4196	1	10072	10072		25.45	0	1	79021	+		38040	18979	25361	25373	43370	43370					0.04737750206345481
NKKSKKQTG	9	Unmodified	_NKKSKKQTG_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80364990234375	2	509.803823	1017.59309	-0.89954	-0.00045859	0.77889	0.00039708	-0.12065	-6.1507E-05	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.76255	1	8341	8341		35.618	6.4687	1	1874600			38041	1076	25362	25374	43371	43371					0.08499950083137264
NKKSKKQTG	9	Unmodified	_NKKSKKQTG_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8036193847656	2	509.803823	1017.59309	-0.054339	-2.7702E-05	-0.14483	-7.3836E-05	-0.19917	-0.00010154	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.44421	2	8740	8740;8788		54.776	13.998	1	2906900			38042	1076	25362	25374	43372;43373	43372					0.08499950083137264
NKKSKKQTG	9	Unmodified	_NKKSKKQTG_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.803466796875	2	509.803823	1017.59309	0.9788	0.00049899	-1.2019	-0.00061275	-0.22313	-0.00011375	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.78983	1	8748	8748		27.882	1.0861	1	979740			38043	1076	25362	25374	43374	43374					0.08499950083137264
NKKSKKQTG	9	Unmodified	_NKKSKKQTG_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8037109375	2	509.803823	1017.59309	1.253	0.0006388	-1.454	-0.00074124	-0.20094	-0.00010244	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.76255	2	9046	8950;9046		35.618	6.4687	1	3243500			38044	1076	25362	25374	43375;43376	43376					0.08499950083137264
NKKSKKQTG	9	Unmodified	_NKKSKKQTG_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8037414550781	2	509.803823	1017.59309	-0.37726	-0.00019233	0.1115	5.6841E-05	-0.26576	-0.00013549	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.69624	3	8554	8458;8554;8638		40.778	6.2817	1	3415500			38045	1076	25362	25374	43377;43378;43379	43378					0.08499950083137264
NKKSKKQTG	9	Unmodified	_NKKSKKQTG_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8037109375	2	509.803823	1017.59309	0.68681	0.00035014	-0.92116	-0.00046961	-0.23436	-0.00011948	509.80326235241614	86.403	4.313	86.552	84.994	89.307	0.14902					345	101	5	0	0	0	0.76255	2	8540	8540;8683		35.618	5.3006	1	3017600			38046	1076	25362	25374	43380;43381	43380					0.08499950083137264
NKKSKKQTG	9	Unmodified	_NKKSKKQTG_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.80352783203125	2	509.803823	1017.59309	-1.4574	-0.000743	1.1751	0.00059908	-0.2823	-0.00014392	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.69624	1	8284	8284		40.778	6.6056	1	920080			38047	1076	25362	25374	43382	43382					0.08499950083137264
NKKSKKQTG	9	Unmodified	_NKKSKKQTG_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.80364990234375	2	509.803823	1017.59309	-1.541	-0.00078559	1.3366	0.0006814	-0.20435	-0.00010418	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.76255	1	8417	8417		35.618	6.4687	1	2989000			38048	1076	25362	25374	43383	43383					0.08499950083137264
NKKSKKQTG	9	Unmodified	_NKKSKKQTG_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000495619.1_1_2:183822183-183829436:-|nuORF	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8037109375	2	509.803823	1017.59309	-0.073626	-3.7535E-05	-0.14793	-7.5416E-05	-0.22156	-0.00011295	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.55097	2	10241	10241;10288		49.442	7.0454	1	3087300			38049	1076	25362	25374	43384;43385	43384					0.08499950083137264
NKKTAKYY	8	Unmodified	_NKKTAKYY_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.2800598144531	2	508.282192	1014.54983	-0.055639	-2.828E-05	-3.7761	-0.0019193	-3.8318	-0.0019476	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.90523	2	8993	8993;9124		44.117	5.6261	1	1918800			38050	14602	25363	25375	43386;43387	43386					0.043137603058426066
NKKTAKYY	8	Unmodified	_NKKTAKYY_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2798767089844	2	508.282192	1014.54983	0.22565	0.0001147	-4.0704	-0.0020689	-3.8448	-0.0019542	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.66521	1	9211	9211		68.787	24.67	1	1820400			38051	14602	25363	25375	43388	43388					0.043137603058426066
NKKTAKYY	8	Unmodified	_NKKTAKYY_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.280029296875	2	508.282192	1014.54983	-0.39652	-0.00020155	-3.6656	-0.0018632	-4.0621	-0.0020647	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.90983	1	8687	8687		42.396	4.888	1	2080300			38052	14602	25363	25375	43389	43389					0.043137603058426066
NKKTAKYY	8	Unmodified	_NKKTAKYY_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2798767089844	2	508.282192	1014.54983	-1.5862	-0.00080625	-2.312	-0.0011752	-3.8982	-0.0019814	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.89043	2	8716	8716;8740		35.618	0.46626	1	1814000			38053	14602	25363	25375	43390;43391	43390					0.043137603058426066
NKKTAKYY	8	Unmodified	_NKKTAKYY_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	L1MEc_dup2383|chr2:89575914-89577159:-|2.045554012140125|0.1474267064561223|3.79|63.0|14|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2800598144531	2	508.282192	1014.54983	-0.38511	-0.00019575	-3.5589	-0.0018089	-3.944	-0.0020047	508.28029410514995	88.272	2.579	88.735	87.686	90.265	0.46312					198	63	4	0	0	0	0.93293	1	10369	10369		51.335	8.4712	1	2008000			38054	14602	25363	25375	43392	43392					0.043137603058426066
NKKTHKKKVN	10	Unmodified	_NKKTHKKKVN_					0	0	0			REV__ENSG00000095209|ENST00000374692|TMEM38B	REV__ENSG00000095209|ENST00000374692|TMEM38B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.922119140625	3	408.922689	1223.74624	-1.7912	-0.00073246	0.82572	0.00033766	-0.96547	-0.0003948	408.92296036119325	104.35	2.8249	104.52	103.85	106.67	0.17096					215	70	5	0	0	0	0.8651	1	11120	11120		24.232	0	1	5290200	+		38055	17055	25364	25376	43393	43393					0.1433156519960903
NKKTKGLID	9	Unmodified	_NKKTKGLID_					0	0	0		ENSG00000083168|ENST00000265713|KAT6A;ENST00000470574.1_1_8:41832143-41834721:-|nuORF;nc|ENSG00000156650|Q8WYB5-2|KAT6B;ENSG00000156650|ENST00000287239|KAT6B	ENSG00000083168|ENST00000265713|KAT6A;nc|ENSG00000156650|Q8WYB5-2|KAT6B	ENSG00000083168|ENST00000265713|KAT6A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8061218261719	2	508.808574	1015.60259	-0.68521	-0.00034864	-0.65536	-0.00033345	-1.3406	-0.00068209	508.8081192090242	89.422	0.79648	89.892	89.476	90.273	0.47068					37	19	2	0	0	0	0.77244	1	10602	10602		32.812	0	1	1252700			38056	1498;5387	25365	25377	43394	43394					0.09541718368666352
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.44421	1	8431	8431		54.776	12.38	1	9288900			38057	5832	25366	25378	43395	43395					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3036499023438	2	523.303655	1044.59276	-0.75421	-0.00039468	0.83726	0.00043814	0.083058	4.3465E-05	523.3039964981095	91.826	2.332	91.826	91.507	93.839	0					135	53	3	0	0	0	0.73802	1	8974	8974		37.812	2.1932	1	769560			38058	5832	25366	25378	43396	43396					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.303655	1044.59276	-0.041393	-2.1661E-05	-0.20594	-0.00010777	-0.24734	-0.00012943	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.69624	2	8745	8674;8745		40.778	1.5253	1	3850300			38059	5832	25366	25378	43397;43398	43398					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3033447265625	2	523.303655	1044.59276	-0.041206	-2.1563E-05	-0.13765	-7.2034E-05	-0.17886	-9.3597E-05	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.69624	4	9201	9201;9213;9286;9384		40.778	2.3088	1	12431000			38060	5832	25366	25378	43399;43400;43401;43402	43399					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3033447265625	2	523.303655	1044.59276	1.4247	0.00074556	-1.721	-0.00090062	-0.29632	-0.00015507	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.73802	1	9030	9030		37.812	8.662	1	3882100			38061	5832	25366	25378	43403	43403					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3036499023438	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.73802	3	9523	9523;9583;9595		37.812	4.9302	1	13080000			38062	5832	25366	25378	43404;43405;43406	43404					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3032836914062	2	523.303655	1044.59276	1.0264	0.00053713	-1.3248	-0.00069329	-0.29841	-0.00015616	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.77244	1	8736	8736		32.812	2.4947	1	3817300			38063	5832	25366	25378	43407	43407					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3035278320312	2	523.303655	1044.59276	1.1688	0.00061163	-1.3622	-0.00071286	-0.19344	-0.00010123	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.6204	4	9023	9023;9179;9300;9349		45.972	5.1941	1	12580000			38064	5832	25366	25378	43408;43409;43410;43411	43408					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3035278320312	2	523.303655	1044.59276	-0.178	-9.3149E-05	-0.24214	-0.00012672	-0.42015	-0.00021986	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.69624	4	8407	8384;8407;8525;8561		40.778	7.4938	1	4158500			38065	5832	25366	25378	43412;43413;43414;43415	43413					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3033447265625	2	523.303655	1044.59276	-0.1734	-9.0741E-05	-0.15994	-8.3699E-05	-0.33334	-0.00017444	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.44421	3	8634	8634;9017;9116		54.776	19.158	1	13808000			38066	5832	25366	25378	43416;43417;43418	43416					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.303655	1044.59276	0.69703	0.00036476	-1.0638	-0.00055667	-0.36673	-0.00019191	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.69624	2	8523	8523;8630		40.778	5.1599	1	3801600			38067	5832	25366	25378	43419;43420	43419					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3036499023438	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.77244	3	8667	8667;9196;9268		32.812	3.6248	1	13442000			38068	5832	25366	25378	43421;43422;43423	43421					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3037719726562	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.69624	3	8345	8295;8345;8451		40.778	12.896	1	3566700			38069	5832	25366	25378	43424;43425;43426	43425					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.303466796875	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.6204	1	9030	9030		45.972	1.5951	1	12189000			38070	5832	25366	25378	43427	43427					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3031005859375	2	523.303655	1044.59276	0.60955	0.00031898	-0.6954	-0.00036391	-0.085851	-4.4926E-05	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.6204	3	9970	9970;10070;10118		45.972	8.1607	1	4023800			38071	5832	25366	25378	43428;43429;43430	43428					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3026733398438	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.55097	3	10657	10657;10669;10784		49.442	5.3247	1	11944000			38072	5832	25366	25378	43431;43432;43433	43431					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3034057617188	2	523.303655	1044.59276	-0.50611	-0.00026485	0.28637	0.00014986	-0.21974	-0.00011499	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.6204	2	10218	10064;10218		45.972	5.1941	1	3970100			38073	5832	25366	25378	43434;43435	43435					0.07224530363282611
NKKTKPKSD	9	Unmodified	_NKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3034057617188	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.73802	4	10680	10522;10534;10680;10795		37.812	3.6424	1	13160000			38074	5832	25366	25378	43436;43437;43438;43439	43438					0.07224530363282611
NKKTKVNLS	9	Unmodified	_NKKTKVNLS_					0	0	0			REV__ENSG00000178974|ENST00000313833|FBXO34	REV__ENSG00000178974|ENST00000313833|FBXO34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3145141601562	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12418	12418		26.693	0	1	4038100	+		38075	22305	25367	25379	43440	43440					0.09941120742928433
NKKTPGVKPCE	11	Unmodified	_NKKTPGVKPCE_					0	0	0		ENSG00000198551|ENST00000361113|ZNF627	ENSG00000198551|ENST00000361113|ZNF627	ENSG00000198551|ENST00000361113|ZNF627	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8238525390625	2	600.823898	1199.63324	-0.59314	-0.00035637	1.6155	0.00097062	1.0224	0.00061425	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.60687	1	6826	6826		43.651	2.8726	1	825510			38076	8284	25368	25380	43441	43441					0.04141128691389895
NKKTRLTN	8	Unmodified	_NKKTRLTN_					0	0	0			REV__nc|ENSG00000160271|Q12967-4|RALGDS;REV__nc|ENSG00000160271|Q12967-5|RALGDS	REV__nc|ENSG00000160271|Q12967-4|RALGDS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.79071044921875	2	487.790715	973.566878	-1.0481	-0.00051127	1.0168	0.00049598	-0.03133	-1.5283E-05	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.84341	1	8022	8022		24.203	0	1	1176800	+		38077	29965;29966	25369	25381	43442	43442					0.07903680911636002
NKKTSLIKTY	10	Unmodified	_NKKTSLIKTY_					0	0	0			REV__ENSG00000152217|ENST00000649279|SETBP1	REV__ENSG00000152217|ENST00000649279|SETBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.8561401367188	2	598.355888	1194.69722	1.6651	0.0009963	4.0005	0.0023937	5.6656	0.00339	598.3583175004217	94.283	4.5904	94.715	93.221	97.812	0.4324					199	114	2	0	0	0	0.86471	1	11172	11172		30.318	2.2362	1	27623000	+		38078	20291	25370	25382	43443	43443					0.10766232120022323
NKKTSPGVKS	10	Unmodified	_NKKTSPGVKS_					0	0	0		ENSG00000223547|ENST00000439326|ZNF844	ENSG00000223547|ENST00000439326|ZNF844	ENSG00000223547|ENST00000439326|ZNF844	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.70553	2	8439	8381;8439		44.377	0.65241	1	3566700			38079	8698	25371	25383	43444;43445	43445					0.07224530363282611
NKKVAEIPF	9	Unmodified	_NKKVAEIPF_					0	0	0		ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3	ENSG00000105409|ENST00000648268|ATP1A3	ENSG00000105409|ENST00000648268|ATP1A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3035278320312	2	523.305667	1044.59678	-1.0823	-0.0005664	-2.8643	-0.0014989	-3.9466	-0.0020653	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.76255	2	10354	10354;10498		35.618	1.3601	1	13160000			38080	2214	25372	25384	43446;43447	43446					0.07626619856978323
NKKVKGESLS	10	Unmodified	_NKKVKGESLS_					0	0	0			REV__nc|ENSG00000140632|Q49A26-4|GLYR1	REV__nc|ENSG00000140632|Q49A26-4|GLYR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.318115234375	2	545.316763	1088.61897	0.15103	8.2357E-05	-0.42604	-0.00023233	-0.27501	-0.00014997	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.70553	1	8593	8593		44.377	4.319	1	5755000	+		38081	19634	25373	25385	43448	43448					0.07820799534783873
NKKVSTGVKP	10	Unmodified	_NKKVSTGVKP_					0	0	0		ENSG00000277462|ENST00000366503|ZNF670	ENSG00000277462|ENST00000366503|ZNF670	ENSG00000277462|ENST00000366503|ZNF670	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.3224487304688	2	529.321848	1056.62914	-1.5195	-0.0008043	2.0796	0.0011008	0.56007	0.00029646	529.3227009054564	100.97	1.3749	101.12	100.57	101.95	0.15504					63	33	3	0	0	0	0.85251	1	10492	10492		19.997	1.7347	1	285080			38082	9021	25374	25386	43449	43449					0.10309407260024273
NKKYAVIVP	9	Unmodified	_NKKYAVIVP_					0	0	0			REV__ENSG00000163902|ENST00000296255|RPN1	REV__ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3139038085938	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12938	12938		25.45	1.2474	1	4038100	+		38083	20995	25375	25387	43450	43450					0.10343210236624145
NKLAAFTDAP	10	Unmodified	_NKLAAFTDAP_					0	0	0			REV__ENSG00000140575|ENST00000268182|IQGAP1	REV__ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.277099609375	2	524.277106	1046.53966	2.7827	0.0014589	-3.2687	-0.0017137	-0.48603	-0.00025482	524.2754281662812	25.682	3.5829	25.251	24.138	27.721	-0.4311					230	81	7	0	0	0	0.23822	2	1400	1400;1504		79.713	7.3311	1	23207000	+		38084	19633	25376	25388	43451;43452	43451					0.018251525805908386
NKLAALLA	8	Unmodified	_NKLAALLA_					0	0	0			REV__ENSG00000120699|ENST00000389704|EXOSC8	REV__ENSG00000120699|ENST00000389704|EXOSC8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7843322753906	2	407.263271	812.511988	1.5749	0.00064142	2.7976	0.0011393	4.3725	0.0017808	407.2642658464496	35.081	1.8399	35.329	34.85	36.689	0.2477					104	46	3	0	0	0	0.4196	1	2589	2589		19.36	0	1	2459600	+		38085	18423	25377	25389	43453	43453					0.09823294111026826
NKLAALLAF	9	Unmodified	_NKLAALLAF_					0	0	0			REV__ENSG00000120699|ENST00000389704|EXOSC8	REV__ENSG00000120699|ENST00000389704|EXOSC8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.2610168457031	2	480.797478	959.580402	-0.86128	-0.0004141	2.1028	0.001011	1.2415	0.0005969	480.79855642700437	57.833	0.24661	57.913	57.79	58.036	0.079643					16	12	2	0	0	0	0.20789	1	4897	4897		23.042	6.3375	1	73106	+		38086	18423	25378	25390	43454	43454					0.09899538690888221
NKLAHKFS	8	Unmodified	_NKLAHKFS_					0	0	0			REV__nc|ENSG00000205571|Q16637-4|SMN1	REV__nc|ENSG00000205571|Q16637-4|SMN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.76727294921875	2	472.769252	943.52395	-0.5652	-0.00026721	-3.8015	-0.0017972	-4.3667	-0.0020645	472.76729274425634	81.448	2.2568	81.505	80.558	82.815	0.057816					110	51	3	0	0	0	0.84341	1	8047	8047		24.203	3.7209	1	178400	+		38087	21800	25379	25391	43455	43455					0.04992910854230104
NKLEITVTE	9	Unmodified	_NKLEITVTE_					0	0	0			REV__ENSG00000167088|ENST00000300413|SNRPD1	REV__ENSG00000167088|ENST00000300413|SNRPD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.8133544921875	2	523.790047	1045.56554	-0.78003	-0.00040857	0.74991	0.0003928	-0.030123	-1.5778E-05	523.7903013242111	38.785	0.58815	39.34	39.026	39.615	0.55449					24	13	2	0	0	0	0.20789	1	3219	3219		21.96	0	1	195850	+		38088	21353	25380	25392	43456	43456					0.04458002032242803
NKLESVLQLNG	11	Unmodified	_NKLESVLQLNG_					0	0	0			REV__ENSG00000083093|ENST00000261584|PALB2	REV__ENSG00000083093|ENST00000261584|PALB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5650634765625	3	405.562827	1213.66665	1.5319	0.00062128	3.2091	0.0013015	4.741	0.0019228	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.73893	1	5939	5939		16.53	0	1	245170	+		38089	16846	25381	25393	43457	43457					0.06836453734968018
NKLETIRYLA	10	Unmodified	_NKLETIRYLA_					0	0	0		ENST00000514414.1_1_4:74951714-74951975:-|nuORF;ENST00000260054.8_1_11:82972955-82984922:-|nuORF;nc|ENSG00000137500|Q9GZT6-3|CCDC90B;nc|ENSG00000137500|Q9GZT6-2|CCDC90B;ENSG00000137500|ENST00000529689|CCDC90B	ENST00000514414.1_1_4:74951714-74951975:-|nuORF	ENST00000514414.1_1_4:74951714-74951975:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78533935546875	3	407.571434	1219.69247	1.6292	0.00066401	-0.11918	-4.8574E-05	1.51	0.00061544	407.57118163206724	33.738	0.41434	33.908	33.653	34.067	0.16971					16	9	2	0	0	0	0.37624	1	2425	2425		20.03	0	1	123930			38090	4206	25382	25394	43458	43458					0.09141347977242731
NKLFLSAF	8	Unmodified	_NKLFLSAF_					0	0	0			REV__ENST00000591601.5_1_19:2038203-2038236:-|nuORF	REV__ENST00000591601.5_1_19:2038203-2038236:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.2682800292969	2	470.268553	938.522553	-0.5952	-0.00027991	0.70461	0.00033135	0.1094	5.1449E-05	470.26875072135346	74.151	2.0983	74.542	73.933	76.031	0.3911					119	51	3	0	0	0	0.9295	1	8303	8303		55.504	5.4797	1	1416400	+		38091	29199	25383	25395	43459	43459					0.05083276765458322
NKLFSLLPTT	10	Unmodified	_NKLFSLLPTT_					0	0	0			REV__ENSG00000125351|ENST00000276201|UPF3B	REV__ENSG00000125351|ENST00000276201|UPF3B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3298950195312	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.80179	2	9301	9240;9301		39.253	3.6345	1	11042000	+		38092	18637	25384	25396	43460;43461	43461					0.08819158199935373
NKLFSLLPTT	10	Unmodified	_NKLFSLLPTT_					0	0	0			REV__ENSG00000125351|ENST00000276201|UPF3B	REV__ENSG00000125351|ENST00000276201|UPF3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.329833984375	2	567.331882	1132.64921	-1.2007	-0.00068122	-1.9524	-0.0011076	-3.1531	-0.0017889	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.86218	1	9244	9244		32.812	1.2826	1	5763000	+		38093	18637	25384	25396	43462	43462					0.08819158199935373
NKLFSLLPTT	10	Unmodified	_NKLFSLLPTT_					0	0	0			REV__ENSG00000125351|ENST00000276201|UPF3B	REV__ENSG00000125351|ENST00000276201|UPF3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3301391601562	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.64457	2	9521	9376;9521		47.657	6.2307	1	18558000	+		38094	18637	25384	25396	43463;43464	43464					0.08819158199935373
NKLFSLLPTT	10	Unmodified	_NKLFSLLPTT_					0	0	0			REV__ENSG00000125351|ENST00000276201|UPF3B	REV__ENSG00000125351|ENST00000276201|UPF3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3299560546875	2	567.331882	1132.64921	0.77491	0.00043963	-4.0071	-0.0022734	-3.2322	-0.0018337	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.86471	1	8960	8960		30.318	3.6248	1	6344600	+		38095	18637	25384	25396	43465	43465					0.08819158199935373
NKLFSLLPTT	10	Unmodified	_NKLFSLLPTT_					0	0	0			REV__ENSG00000125351|ENST00000276201|UPF3B	REV__ENSG00000125351|ENST00000276201|UPF3B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3292236328125	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.70553	1	11170	11170		44.377	12.422	1	6007000	+		38096	18637	25384	25396	43466	43466					0.08819158199935373
NKLFTALKQ	9	Unmodified	_NKLFTALKQ_					0	0	0			REV__ENSG00000173212|ENST00000369500|MAB21L3	REV__ENSG00000173212|ENST00000369500|MAB21L3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8168334960938	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.76764	1	8805	8805		34.173	0	1	4022300	+		38097	21902	25385	25397	43467	43467					0.09498308748311501
NKLGCGLGGL	10	Unmodified	_NKLGCGLGGL_					0	0	0			REV__nc|ENSG00000177455|P15391-2|CD19	REV__nc|ENSG00000177455|P15391-2|CD19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.25439453125	2	466.25512	930.495686	-1.5133	-0.00070558	-1.0867	-0.00050666	-2.6	-0.0012122	466.2545098406443	61.17	1.13	61.17	60.102	61.232	0					111	49	3	0	0	0	0.86201	1	5359	5359		24.203	0	1	374960	+		38098	22203	25386	25398	43468	43468					0.027658448826400672
NKLGCGLGGL	10	Unmodified	_NKLGCGLGGL_					0	0	0			REV__nc|ENSG00000177455|P15391-2|CD19	REV__nc|ENSG00000177455|P15391-2|CD19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.25482177734375	2	466.25512	930.495686	-1.4812	-0.00069062	-0.75102	-0.00035017	-2.2322	-0.0010408	466.2546647596287	63.114	1.6104	63.114	62.32	63.93	0					124	75	2	0	0	0	0.86201	1	5495	5495		24.203	2.2429	1	225480	+		38099	22203	25386	25398	43469	43469					0.027658448826400672
NKLGCGLGGL	10	Unmodified	_NKLGCGLGGL_					0	0	0			REV__nc|ENSG00000177455|P15391-2|CD19	REV__nc|ENSG00000177455|P15391-2|CD19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2537841796875	2	466.25512	930.495686	-1.0712	-0.00049944	-1.7254	-0.00080447	-2.7966	-0.0013039	466.2541904327881	60.586	1.2512	60.686	59.935	61.186	0.10082					87	49	2	0	0	0	0.86452	1	5255	5255		30.504	2.6214	1	202870	+		38100	22203	25386	25398	43470	43470					0.027658448826400672
NKLGNTHN	8	Unmodified	_NKLGNTHN_					0	0	0			REV__ENST00000489770.1_1_14:99866590-99879383:-|nuORF	REV__ENST00000489770.1_1_14:99866590-99879383:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.23150634765625	2	449.230491	896.446428	0.9656	0.00043378	-0.74303	-0.00033379	0.22258	9.9988E-05	449.2301030462438	83.133	5.5992	83.192	80.121	85.72	0.059158					204	132	2	0	0	0	0.64455	1	8331	8331		69.628	29.055	1	221730	+		38101	27625	25387	25399	43471	43471					-0.005937270819686091
NKLIDAECS	9	Unmodified	_NKLIDAECS_					0	0	0			REV__nc|ENSG00000198919|Q86Y13-2|DZIP3	REV__nc|ENSG00000198919|Q86Y13-2|DZIP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.7373352050781	2	496.739499	991.464446	-0.073904	-3.6711E-05	-3.4346	-0.0017061	-3.5085	-0.0017428	496.7375659828047	59.559	0.70983	59.546	59.225	59.935	-0.013733					35	18	3	0	0	0	0.7932	1	5489	5489		26.693	1.2427	1	333290	+		38102	23415	25388	25400	43472	43472					-0.03162772942130232
NKLIMKKH	8	Unmodified	_NKLIMKKH_					0	0	0			REV__ENST00000457997.1_1_13:19435671-19446003:-|nuORF	REV__ENST00000457997.1_1_13:19435671-19446003:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3079833984375	2	506.310229	1010.60591	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.327	1	44.269	43.769	44.769	-0.058262								0	0	0	0.29344	1	3115	3115		31.955	1.4512	1		+		38103	26624	25389	25401	43473	43473					0.1010268994167518
NKLKEIPPEIG	11	Unmodified	_NKLKEIPPEIG_					0	0	0		ENSG00000188906|ENST00000298910|LRRK2;ENST00000479187.5_1_12:40692272-40758932:+|nuORF	ENSG00000188906|ENST00000298910|LRRK2	ENSG00000188906|ENST00000298910|LRRK2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2662048339844	3	413.243206	1236.70779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.587	1	16.1	15.6	16.6	-0.48718								0	0	0	0.56276	1	150	150		22.562	0.78116	1				38104	7971	25390	25402	43474	43474					0.09890214774395645
NKLKEVLM	8	Unmodified	_NKLKEVLM_					0	0	0			REV__ENST00000441246.6_1_4:57857026-57860585:+|nuORF	REV__ENST00000441246.6_1_4:57857026-57860585:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7904357910156	2	487.788795	973.563038	-0.24073	-0.00011743	4.0932	0.0019966	3.8524	0.0018792	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.884	1	9960	9960		33.516	0.70317	1	1981400	+		38105	26752	25391	25403	43475	43475					0.07519875093578321
NKLKMITLYK	10	Unmodified	_NKLKMITLYK_					0	0	0			REV__nc|ENSG00000166960|Q5BJE1-3|CCDC178	REV__nc|ENSG00000166960|Q5BJE1-3|CCDC178	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.2516174316406	3	417.921298	1250.74206	1.9854	0.00082972	-3.5395	-0.0014793	-1.5542	-0.00064953	417.91973324598933	45.042	2.3897	45.038	44.498	46.888	-0.0041618					145	56	4	0	0	0	0.86763	1	3628	3628		25.126	4.811	1	825880	+		38106	21345	25392	25404	43476	43476					0.1267233966166259
NKLLARAIAIR	11	Unmodified	_NKLLARAIAIR_					0	0	0			REV__ENSG00000135776|ENST00000344517|ABCB10	REV__ENSG00000135776|ENST00000344517|ABCB10	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2652587890625	3	413.606701	1237.79827	-1.86	-0.00076929	-2.9873	-0.0012356	-4.8473	-0.0020049	413.60539702445965	41.151	1.2031	41.151	40.982	42.185	0					58	31	2	0	0	0	0.17437	1	2764	2764		20.315	8.8604	1	120440	+		38107	19250	25393	25405	43477	43477					0.18888728613319472
NKLLARAIAIR	11	Unmodified	_NKLLARAIAIR_					0	0	0			REV__ENSG00000135776|ENST00000344517|ABCB10	REV__ENSG00000135776|ENST00000344517|ABCB10	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	413.606701	1237.79827	-1.1479	-0.00047479	-4.7497	-0.0019645	-5.8976	-0.0024393	413.6046664422316	40.507	0.59621	40.899	40.535	41.131	0.39209	-0.13378	-0.00092425	NaN	20.315	30	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	522370	+		38108	19250	25393	25405							0.18888728613319472
NKLLKVVC	8	Unmodified	_NKLLKVVC_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.78790283203125	2	458.786056	915.557558	0.69326	0.00031806	2.4281	0.001114	3.1213	0.001432	458.78715906372344	92.966	2.4091	93.125	92.453	94.862	0.15874					174	57	5	0	0	0	0.88915	1	9526	9526		35.201	6.9464	1	14401000	+		38109	18072;16702	25394	25406	43478	43478					0.09640196301768356
NKLLKVVC	8	Unmodified	_NKLLKVVC_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.78759765625	2	458.786056	915.557558	0.6747	0.00030954	3.1519	0.0014461	3.8266	0.0017556	458.78743118260775	92.703	1.6363	93.149	92.689	94.326	0.44662					124	39	4	0	0	0	0.88915	4	11045	10997;11045;11093;11131		44.531	16.277	1	5092100	+		38110	18072;16702	25394	25406	43479;43480;43481;43482	43480					0.09640196301768356
NKLLKVVC	8	Unmodified	_NKLLKVVC_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	459.27923583984375	2	458.786056	915.557558	0.7763	0.00035615	3.3643	0.0015435	4.1406	0.0018996	458.7875553420012	94.487	1.9449	94.92	94.757	96.702	0.4324					60	46	2	0	0	0	0.4196	1	11276	11276		44.531	9.3304	1	187080	+		38111	18072;16702	25394	25406	43483	43483					0.09640196301768356
NKLLKVVC	8	Unmodified	_NKLLKVVC_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7876892089844	2	458.786056	915.557558	-0.56464	-0.00025905	4.3311	0.001987	3.7664	0.001728	458.7879697200244	92.862	1.6326	93.312	92.732	94.365	0.44989					129	38	4	0	0	0	0.86791	2	11147	11147;11171		35.201	3.2459	1	6441800	+		38112	18072;16702	25394	25406	43484;43485	43484					0.09640196301768356
NKLLKVVC	8	Unmodified	_NKLLKVVC_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	458.786056	915.557558	-0.12832	-5.887E-05	4.6078	0.002114	4.4795	0.0020551	458.7880846213992	95.233	2.3206	95.301	94.551	96.871	0.068344	0.049272	0.00015136	NaN	44.531	83	54	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	258470	+		38113	18072;16702	25394	25406							0.09640196301768356
NKLLKVVC	8	Unmodified	_NKLLKVVC_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	458.786056	915.557558	0.71276	0.000327	3.6574	0.001678	4.3702	0.002005	458.787658809215	95.128	1.7495	95.291	94.826	96.575	0.16307	0.039481	-0.00072066	NaN	44.531	64	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254130	+		38114	18072;16702	25394	25406							0.09640196301768356
NKLLKVVC	8	Unmodified	_NKLLKVVC_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	458.786056	915.557558	-1.7491	-0.00080248	6.0047	0.0027549	4.2555	0.0019524	458.7887544969384	95.151	1.6767	95.353	95.027	96.704	0.20242	0.10166	0.0014331	NaN	44.531	57	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	285130	+		38115	18072;16702	25394	25406							0.09640196301768356
NKLLKVVC	8	Unmodified	_NKLLKVVC_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000075151|O43432|EIF4G3	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	458.786056	915.557558	0.2227	0.00010217	3.9942	0.0018325	4.2169	0.0019346	458.78786394888914	94.974	1.7937	95.393	94.845	96.639	0.41964	0.14176	-0.00041167	NaN	44.531	61	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200730	+		38116	18072;16702	25394	25406							0.09640196301768356
NKLLLSVTM	9	Unmodified	_NKLLLSVTM_					0	0	0			REV__nc|ENSG00000173262|Q8TDB8-3|SLC2A14	REV__nc|ENSG00000173262|Q8TDB8-3|SLC2A14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8036804199219	2	509.801903	1017.58925	-0.073627	-3.7535E-05	3.6181	0.0018445	3.5444	0.001807	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.7932	1	10276	10276		21.96	0	1	3087300	+		38117	21910	25395	25407	43486	43486					0.08116144265079583
NKLLRCEH	8	Unmodified	_NKLLRCEH_					0	0	0			REV__ENSG00000143344|ENST00000360851|RGL1	REV__ENSG00000143344|ENST00000360851|RGL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.77197265625	2	506.771468	1011.52838	1.1214	0.00056832	-1.1473	-0.00058144	-0.025899	-1.3125E-05	506.7707191861358	17.062	0.4468	16.452	16.305	16.752	-0.6107					19	9	3	0	0	0	0.91472	1	209	209		44.117	0	1	455090	+		38118	19794	25396	25408	43487	43487					0.023080520054804765
NKLLRREKC	9	Unmodified	_NKLLRREKC_					0	0	0		nc|ENSG00000171160|Q8NDC4-2|MORN4;ENSG00000171160|ENST00000307450|MORN4	nc|ENSG00000171160|Q8NDC4-2|MORN4	nc|ENSG00000171160|Q8NDC4-2|MORN4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.3357543945312	2	580.340049	1158.66555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.184	1	20.255	19.755	20.755	0.071127								0	0	0	0.28386	1	465	465		37.159	5.2042	1				38119	15092	25397	25409	43488	43488					0.09255960885070635
NKLPQESFYEC	11	Unmodified	_NKLPQESFYEC_					0	0	0			REV__nc|ENSG00000142166|P17181-3|IFNAR1	REV__nc|ENSG00000142166|P17181-3|IFNAR1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.8818664550781	3	453.207944	1356.602	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.044	1	16.961	16.461	17.461	-0.0821								0	0	0	0.56276	1	197	197		29.551	3.659	1		+		38120	29898	25398	25410	43489	43489					-0.062034891333269115
NKLRQLTA	8	Unmodified	_NKLRQLTA_					0	0	0		ENSG00000146005|ENST00000274710|PSD2	ENSG00000146005|ENST00000274710|PSD2	ENSG00000146005|ENST00000274710|PSD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2872009277344	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.86677	1	12305	12305		27.882	1.1893	1	3080300			38121	4811	25399	25411	43490	43490					0.08748582399971383
NKLTSLSRK	9	Unmodified	_NKLTSLSRK_					0	0	0		nc|ENSG00000148053|Q16620-2|NTRK2;nc|ENSG00000148053|Q16620-3|NTRK2;nc|ENSG00000148053|Q16620-5|NTRK2;nc|ENSG00000148053|Q16620-6|NTRK2;nc|ENSG00000148053|Q16620|NTRK2;ENSG00000148053|ENST00000277120|NTRK2	nc|ENSG00000148053|Q16620-2|NTRK2	nc|ENSG00000148053|Q16620-2|NTRK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.8221435546875	2	523.819473	1045.62439	2.8449	0.0014902	-1.0243	-0.00053656	1.8205	0.00095364	523.8189575554507	102.28	1.3667	102.58	101.57	102.94	0.29865					61	33	2	0	0	0	0.7932	1	12477	12477		21.96	0	1	366070			38122	4931	25400	25412	43491	43491					0.1034052311722462
NKLVAPLG	8	Unmodified	_NKLVAPLG_					0	0	0		ENSG00000106479|ENST00000223210|ZNF862;ENST00000489820.5_1_7:149535487-149541977:+|nuORF	ENSG00000106479|ENST00000223210|ZNF862	ENSG00000106479|ENST00000223210|ZNF862	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78497314453125	2	406.255446	810.496338	1.4425	0.000586	2.074	0.00084259	3.5165	0.0014286	406.25623061189617	35.399	1.1616	35.405	34.862	36.024	0.0063934					38	26	2	0	0	0	0.4196	1	2258	2258		15.636	0	1	23813			38123	2299	25401	25413	43492	43492					0.08351007593989834
NKLYRLLHELH	11	Unmodified	_NKLYRLLHELH_					0	0	0			REV__ENSG00000237700|ENST00000437300|PRAMEF33	REV__ENSG00000237700|ENST00000437300|PRAMEF33	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.225341796875	3	479.277132	1434.80957	0.47042	0.00022546	-2.3639	-0.001133	-1.8935	-0.0009075	479.60974862321945	32.294	0.25758	32.421	32.289	32.546	0.12642					10	5	2	0	0	0	0.18066	1	2242	2242		14.086	0	1	104230	+		38124	22922	25402	25414	43493	43493					0.10955505916854236
NKMKIHIV	8	Unmodified	_NKMKIHIV_					0	0	0		nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;ENSG00000183091|ENST00000397345|NEB	nc|ENSG00000183091|P20929-4|NEB	nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79559326171875	2	491.796955	981.579357	-2.3785	-0.0011697	-1.4435	-0.00070989	-3.822	-0.0018796	491.79615834302405	43.462	1.3116	43.459	43.021	44.333	-0.0024452					60	31	3	0	0	0	0.82464	1	3336	3336		21.702	0	1	272230			38125	7501	25403	25415	43494	43494					0.08783001050346684
NKMLETAIL	9	Unmodified	_NKMLETAIL_					0	0	0			REV__nc|ENSG00000085382|Q8IYU2-3|HACE1	REV__nc|ENSG00000085382|Q8IYU2-3|HACE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.79296875	2	516.791535	1031.56852	0.68918	0.00035616	2.8454	0.0014705	3.5346	0.0018266	516.7928457935418	86.219	2.6893	86.368	84.865	87.554	0.14902					141	62	3	0	0	0	0.78058	1	8490	8490		30.504	1.3541	1	296930	+		38126	16888	25404	25416	43495	43495					0.053995538853769176
NKMTNTNLAV	10	Unmodified	_NKMTNTNLAV_					0	0	0		ENSG00000175220|ENST00000311956|ARHGAP1;ENST00000526423.1_1_11:46700589-46702208:-|nuORF	ENSG00000175220|ENST00000311956|ARHGAP1	ENSG00000175220|ENST00000311956|ARHGAP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.3074340820312	2	553.287148	1104.55974	0.88126	0.00048759	0.23957	0.00013255	1.1208	0.00062014	553.2872285037944	91.993	0.85198	92.441	92.139	92.991	0.44771					44	19	3	0	0	0	0.37624	1	10892	10892		32.812	0.85756	1	244470			38127	6999	25405	25417	43496	43496					0.011645802489056223
NKMWRRYRKWR	11	Unmodified	_NKMWRRYRKWR_					0	0	0			REV__nc|ENSG00000059769|Q9H1X3-2|DNAJC25	REV__nc|ENSG00000059769|Q9H1X3-2|DNAJC25	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.34033203125	3	560.644044	1678.9103	-1.4176	-0.00079477	-2.4417	-0.0013689	-3.8593	-0.0021637	560.6423298589455	102.11	0.15794	102.24	102.1	102.26	0.13569					5	3	2	0	0	0	0.18422	1	10663	10663		1.3219	0.95051	1	102930	+		38128	16446	25406	25418	43497	43497					0.09800259418693713
NKNFRLILHTK	11	Unmodified	_NKNFRLILHTK_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.9482116699219	3	461.945494	1382.81465	2.7792	0.0012839	3.2357	0.0014947	6.015	0.0027786	461.94697066502204	112.87	7.7849	112.84	112.19	119.97	-0.024811					433	277	2	0	0	0	0.75121	1	12426	12426		21.78	0	1	2186600			38129	2259	25407	25419	43498	43498					0.13855809779465744
NKNGKPKRQQR	11	Unmodified	_NKNGKPKRQQR_					0	0	0			REV__nc|ENSG00000134545|P26715-2|KLRC1	REV__nc|ENSG00000134545|P26715-2|KLRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.93328857421875	3	451.932248	1352.77491	-1.2099	-0.00054677	2.1814	0.00098584	0.97152	0.00043906	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.77205	1	10630	10630		17.167	0.63689	1	1176100	+		38130	19150	25408	25420	43499	43499					0.11263682828712263
NKNIPIAV	8	Unmodified	_NKNIPIAV_					0	0	0			REV__ENSG00000144218|ENST00000672756|AFF3	REV__ENSG00000144218|ENST00000672756|AFF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801513671875	2	434.766178	867.517802	-0.56963	-0.00024766	2.4723	0.0010749	1.9027	0.00082723	434.7688165498327	38.442	0.23861	38.783	38.658	38.896	0.34187					7	5	2	0	0	0	0.4196	1	3157	3157		18.324	0	1	21012	+		38131	19877	25409	25421	43500	43500					0.07874392622716186
NKNIVVDI	8	Unmodified	_NKNIVVDI_					0	0	0			REV__ENSG00000131773|ENST00000355849|KHDRBS3	REV__ENSG00000131773|ENST00000355849|KHDRBS3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79345703125	2	457.768917	913.523281	-1.5339	-0.00070218	-0.17107	-7.8311E-05	-1.705	-0.00078049	457.76869401578523	40.536	0.44481	41.125	40.835	41.28	0.58915					17	12	2	0	0	0	0.4196	1	3479	3479		6.7355	0	1	791780	+		38132	18964	25410	25422	43501	43501					0.06306071414508096
NKNKGQLTKSP	11	Unmodified	_NKNKGQLTKSP_					0	0	0		ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7;ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000469999.1_1_7:152065296-152065533:+|nuORF;ENST00000492940.1_1_7:35930257-35938044:+|nuORF;ENST00000513820.1_1_5:118462594-118462864:-|nuORF;ENST00000420492.2_1_9:101369884-101370217:+|nuORF	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.564697265625	3	405.566571	1213.67788	-0.18878	-7.6562E-05	-4.1815	-0.0016959	-4.3703	-0.0017724	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.70278	1	5935	5935		31.068	12.537	1	257140			38133	3230	25411	25423	43502	43502					0.0795927582908007
NKNKGQLTKSP	11	Unmodified	_NKNKGQLTKSP_					0	0	0		ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7;ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000469999.1_1_7:152065296-152065533:+|nuORF;ENST00000492940.1_1_7:35930257-35938044:+|nuORF;ENST00000513820.1_1_5:118462594-118462864:-|nuORF;ENST00000420492.2_1_9:101369884-101370217:+|nuORF	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.8985900878906	3	405.566571	1213.67788	-0.19603	-7.9504E-05	-4.3601	-0.0017683	-4.5562	-0.0018478	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.75779	1	6037	6037		20.315	1.0523	1	328790			38134	3230	25411	25423	43503	43503					0.0795927582908007
NKNKIPRNKLK	11	Unmodified	_NKNKIPRNKLK_					0	0	0		L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|164|3|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|164|3|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|164|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.9222106933594	3	451.62101	1351.8412	0.30521	0.00013784	-2.2776	-0.0010286	-1.9724	-0.00089078	451.61995320650186	17.293	0.48307	16.682	16.52	17.003	-0.6107					24	10	3	0	0	0	0.17955	1	222	222		8.7993	0	1	302760			38135	14567	25412	25424	43504	43504					0.17935498670772176
NKNLKKDLKH	10	Unmodified	_NKNLKKDLKH_					0	0	0		nc|ENSG00000144451|Q8N0X2-5|SPAG16;ENST00000414961.2_1_2:214162027-214228821:+|nuORF;nc|ENSG00000144451|Q8N0X2-4|SPAG16;nc|ENSG00000144451|Q8N0X2-3|SPAG16;ENSG00000144451|ENST00000331683|SPAG16	nc|ENSG00000144451|Q8N0X2-5|SPAG16	nc|ENSG00000144451|Q8N0X2-5|SPAG16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.3715209960938	2	619.372404	1236.73025	1.27	0.0007866	-2.1507	-0.0013321	-0.88075	-0.00054551	619.3710394706492	101.41	0.94493	101.61	101.32	102.26	0.2058					77	22	4	0	0	0	0.86763	1	10669	10669		26.693	1.1189	1	2074300			38136	14974	25413	25425	43505	43505					0.12135858962665225
NKNLNKLGKEG	11	Unmodified	_NKNLNKLGKEG_					0	0	0		L1ME1_dup16259|chr9:36681915-36682464:-|1.1653022257669774|0.0148250137166571|6.3|63.0|1|1|sense	L1ME1_dup16259|chr9:36681915-36682464:-|1.1653022257669774|0.0148250137166571|6.3|63.0|1|1|sense	L1ME1_dup16259|chr9:36681915-36682464:-|1.1653022257669774|0.0148250137166571|6.3|63.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5643005371094	3	405.566571	1213.67788	-1.5366	-0.00062318	-2.7212	-0.0011036	-4.2578	-0.0017268	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.74771	1	5598	5598		22.562	1.7244	1	187890			38137	14598	25414	25426	43506	43506					0.0795927582908007
NKNSLLVR	8	Unmodified	_NKNSLLVR_					0	0	0		ENSG00000174255|ENST00000482457|ZNF80	ENSG00000174255|ENST00000482457|ZNF80	ENSG00000174255|ENST00000482457|ZNF80	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2874450683594	2	472.287808	942.561064	-0.97076	-0.00045848	0.82719	0.00039067	-0.14357	-6.7805E-05	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.87064	1	9731	9731		29.15	0	1	26024000			38138	6921	25415	25427	43507	43507					0.08748582400005489
NKNSLLVR	8	Unmodified	_NKNSLLVR_					0	0	0		ENSG00000174255|ENST00000482457|ZNF80	ENSG00000174255|ENST00000482457|ZNF80	ENSG00000174255|ENST00000482457|ZNF80	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28717041015625	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.87479	1	9980	9980		30.504	1.3541	1	50946000			38139	6921	25415	25427	43508	43508					0.08748582400005489
NKNYKELI	8	Unmodified	_NKNYKELI_					0	0	0		nc|ENSG00000165246|Q8NFZ3-2|NLGN4Y;nc|ENSG00000165246|Q8NFZ3|NLGN4Y;ENSG00000165246|ENST00000684976|NLGN4Y;chrY:14522941-14622009|15|32.93|0.27|6.92|+|ENST00000643089|NLGN4Y,NLGN4Y;ENSG00000146938|ENST00000381095|NLGN4X;nc|ENSG00000146938|Q8N0W4-2|NLGN4X	nc|ENSG00000165246|Q8NFZ3-2|NLGN4Y	nc|ENSG00000165246|Q8NFZ3-2|NLGN4Y	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.28656005859375	2	511.287474	1020.5604	0.36299	0.00018559	-1.6305	-0.00083365	-1.2675	-0.00064806	511.28657650841876	42.002	2.0595	41.971	41.461	43.521	-0.030987					111	49	5	0	0	0	0.91977	1	3158	3158		45.952	1.5748	1	6140800			38140	558	25416	25428	43509	43509					0.05093742960275449
NKNYKRLMKIF	11	Unmodified	_NKNYKRLMKIF_					0	0	0		L1MA1_dup4040|chr19:27807049-27807811:+|1.3672237593164838|0.2006977400778447|2.77|63.0|1|1|sense	L1MA1_dup4040|chr19:27807049-27807811:+|1.3672237593164838|0.2006977400778447|2.77|63.0|1|1|sense	L1MA1_dup4040|chr19:27807049-27807811:+|1.3672237593164838|0.2006977400778447|2.77|63.0|1|1|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.2851867675781	3	485.614868	1453.82277	0.14495	7.039E-05	2.7259	0.0013237	2.8709	0.0013941	485.6161854424908	59.427	1.3629	59.396	58.812	60.175	-0.031216					56	36	2	0	0	0	0.17955	1	5571	5571		12.957	0	1	98152			38141	14534	25417	25429	43510	43510					0.11401620704532434
NKPALRAVRQR	11	Unmodified	_NKPALRAVRQR_					0	0	0		nc|ENSG00000162236|Q13190-3|STX5;nc|ENSG00000162236|Q13190-2|STX5;nc|ENSG00000162236|Q13190-4|STX5;ENSG00000162236|ENST00000294179|STX5	nc|ENSG00000162236|Q13190-3|STX5	nc|ENSG00000162236|Q13190-3|STX5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.9400634765625	3	436.937221	1307.78984	-0.48993	-0.00021407	3.7434	0.0016356	3.2535	0.0014216	436.93993311330917	55.356	1.163	55.329	54.946	56.109	-0.027275					72	30	4	0	0	0	0.74771	1	5058	5058		22.562	4.0305	1	489260			38142	5675	25418	25430	43511	43511					0.1482517469673894
NKPIYIHK	8	Unmodified	_NKPIYIHK_					0	0	0			REV__ENSG00000169154|ENST00000307599|GOT1L1	REV__ENSG00000169154|ENST00000307599|GOT1L1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.79931640625	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.603	1	48.641	48.141	49.141	0.037731								0	0	0	0.29755	1	3713	3713		24.203	0	1		+		38143	21555	25419	25431	43512	43512					0.08122056922422871
NKPIYIHK	8	Unmodified	_NKPIYIHK_					0	0	0			REV__ENSG00000169154|ENST00000307599|GOT1L1	REV__ENSG00000169154|ENST00000307599|GOT1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.801513671875	2	506.800552	1011.58655	-0.048814	-2.4739E-05	0.95871	0.00048587	0.90989	0.00046113	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.85277	1	3197	3197		25.45	0	1	475290	+		38144	21555	25419	25431	43513	43513					0.08122056922422871
NKPKAIVRLW	10	Unmodified	_NKPKAIVRLW_					0	0	0			REV__nc|ENSG00000130202|Q92692-2|NECTIN2	REV__nc|ENSG00000130202|Q92692-2|NECTIN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.92230224609375	3	408.92403	1223.75026	-0.18603	-7.607E-05	-4.0259	-0.0016463	-4.2119	-0.0017224	408.9223182552884	104.73	3.6152	104.72	103.66	107.27	-0.014809					241	85	5	0	0	0	0.85438	1	11381	11381		16.007	5.9029	1	2991100	+		38145	18855	25420	25432	43514	43514					0.14733654693304743
NKPKLIFH	8	Unmodified	_NKPKLIFH_					0	0	0			REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.8033447265625	2	498.803094	995.591636	0.36192	0.00018053	0.83184	0.00041492	1.1938	0.00059545	498.8033596820182	51.857	1.6149	51.917	51.457	53.072	0.059719					144	50	4	0	0	0	0.81724	1	4120	4120		14.664	0	1	2712200	+		38146	22848	25421	25433	43515	43515					0.09366360785043071
NKPKLIFH	8	Unmodified	_NKPKLIFH_					0	0	0			REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.8036804199219	2	498.803094	995.591636	0.57569	0.00028715	0.65338	0.00032591	1.2291	0.00061306	498.80326110747177	49.369	1.5492	50.214	49.828	51.377	0.84501					106	37	4	0	0	0	0.80706	1	4814	4814		19.36	1.0356	1	6182600	+		38147	22848	25421	25433	43516	43516					0.09366360785043071
NKPNRLLITDK	11	Unmodified	_NKPNRLLITDK_					0	0	0			REV__ENST00000309683.10_1_7:63981444-63981591:-|nuORF	REV__ENST00000309683.10_1_7:63981444-63981591:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.262939453125	3	437.929621	1310.76703	0.23602	0.00010336	-2.9682	-0.0012998	-2.7321	-0.0011965	438.2630794988371	45.346	1.3309	45.389	44.445	45.776	0.042599					44	32	2	0	0	0	0.76892	1	3194	3194		17.833	0.6664	1	183310	+		38148	24871	25422	25434	43517	43517					0.12408110788578597
NKPPKPKFG	9	Unmodified	_NKPPKPKFG_					0	0	0			REV__nc|ENSG00000143153|P05026-2|ATP1B1	REV__nc|ENSG00000143153|P05026-2|ATP1B1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.79864501953125	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.39	1	43.396	42.896	43.896	0.0057487								0	0	0	0.29299	1	2987	2987		33.516	0	1		+		38149	19774	25423	25435	43518	43518					0.08122056922422871
NKPQGPPPP	9	Unmodified	_NKPQGPPPP_					0	0	0		ENSG00000251655|ENST00000500254|PRB1;ENSG00000230657|ENST00000279575|PRB4;nc|ENSG00000230657|P10163|PRB4;nc|ENSG00000251655|P04280|PRB1;ENSG00000121335|ENST00000389362|PRB2	ENSG00000251655|ENST00000500254|PRB1	ENSG00000251655|ENST00000500254|PRB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2521057128906	2	466.253434	930.492316	0.14963	6.9764E-05	0.4386	0.0002045	0.58823	0.00027426	466.2534991696802	60.959	1.2686	60.926	59.804	61.072	-0.032509					71	38	2	0	0	0	0.77546	1	5745	5745		31.955	2.8053	1	239520			38150	3175	25424	25436	43519	43519					0.024289181002814075
NKPRKVRCV	9	Unmodified	_NKPRKVRCV_					0	0	0		ENST00000373731.6_1_6:36457829-36457898:+|nuORF	ENST00000373731.6_1_6:36457829-36457898:+|nuORF	ENST00000373731.6_1_6:36457829-36457898:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3265380859375	2	550.329485	1098.64442	0.24684	0.00013584	-4.4268	-0.0024362	-4.1799	-0.0023003	550.327086838159	99.973	1.2029	100.19	99.606	100.81	0.21511					73	27	4	0	0	0	0.72402	2	10412	10412;10474		38.806	9.6566	1	361560			38151	10756	25425	25437	43520;43521	43520					0.09903995576178204
NKPRWARLVGL	11	Unmodified	_NKPRWARLVGL_					0	0	0		ENST00000444872.3_1_9:134907442-134952969:-|nuORF	ENST00000444872.3_1_9:134907442-134952969:-|nuORF	ENST00000444872.3_1_9:134907442-134952969:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26776123046875	3	437.266568	1308.77787	-0.071192	-3.113E-05	3.0883	0.0013504	3.0171	0.0013193	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.76579	1	4491	4491		18.531	1.3643	1	3270700			38152	11816	25426	25438	43522	43522					0.13583557953529635
NKPRWARLVGL	11	Unmodified	_NKPRWARLVGL_					0	0	0		ENST00000444872.3_1_9:134907442-134952969:-|nuORF	ENST00000444872.3_1_9:134907442-134952969:-|nuORF	ENST00000444872.3_1_9:134907442-134952969:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.267822265625	3	437.266568	1308.77787	-0.73822	-0.0003228	3.7045	0.0016198	2.9662	0.001297	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.74022	1	4635	4635		24.232	0	1	3639500			38153	11816	25426	25438	43523	43523					0.13583557953529635
NKPRWARLVGL	11	Unmodified	_NKPRWARLVGL_					0	0	0		ENST00000444872.3_1_9:134907442-134952969:-|nuORF	ENST00000444872.3_1_9:134907442-134952969:-|nuORF	ENST00000444872.3_1_9:134907442-134952969:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2680358886719	3	437.266568	1308.77787	1.1681	0.00051075	1.7871	0.00078144	2.9551	0.0012922	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.74022	2	4419	4419;4568		24.232	2.0959	1	4130900			38154	11816	25426	25438	43524;43525	43524					0.13583557953529635
NKPRWARLVGL	11	Unmodified	_NKPRWARLVGL_					0	0	0		ENST00000444872.3_1_9:134907442-134952969:-|nuORF	ENST00000444872.3_1_9:134907442-134952969:-|nuORF	ENST00000444872.3_1_9:134907442-134952969:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2674560546875	3	437.266568	1308.77787	1.089	0.00047619	1.6885	0.00073832	2.7775	0.0012145	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.7896	1	4711	4711		13.508	0.55046	1	2745300			38155	11816	25426	25438	43526	43526					0.13583557953529635
NKPSVRRS	8	Unmodified	_NKPSVRRS_					0	0	0		ENSG00000138136|ENST00000370193|LBX1	ENSG00000138136|ENST00000370193|LBX1	ENSG00000138136|ENST00000370193|LBX1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2224426269531	2	472.275232	942.535912	0.048787	2.3041E-05	4.2108	0.0019886	4.2596	0.0020117	472.2750189228195	38.688	0.35535	38.635	38.445	38.8	-0.052727					15	10	3	0	0	0	0.4196	1	2319	2319		40.573	8.6178	1	33527			38156	4276	25427	25439	43527	43527					0.06234527597428041
NKPVGLKD	8	Unmodified	_NKPVGLKD_					0	0	0		nc|ENSG00000289720|Q96J02|ITCH;ENSG00000078747|ENST00000374864|ITCH;nc|ENSG00000289720|Q96J02-3|ITCH	nc|ENSG00000289720|Q96J02|ITCH	nc|ENSG00000289720|Q96J02|ITCH	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3002624511719	2	435.75581	869.497067	0.50123	0.00021841	-2.2085	-0.00096235	-1.7072	-0.00074394	435.7548766121118	74.721	0.8411	74.853	74.512	75.353	0.13208					34	24	2	0	0	0	0.4196	1	6903	6903		23.042	5.6775	1	75671			38157	1406	25428	25440	43528	43528					0.0570980224304094
NKQAMTYVK	9	Unmodified	_NKQAMTYVK_					0	0	0			REV__nc|ENSG00000173193|Q460N5-3|PARP14	REV__nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.8375244140625	2	541.786784	1081.55902	1.0895	0.00059026	-0.7298	-0.00039539	0.35967	0.00019487	541.7862491984264	35.727	0.49207	36.168	35.959	36.451	0.44043					17	12	2	0	0	0	0.20789	1	2813	2813		58.782	0	1	221280	+		38158	21898	25429	25441	43529	43529					0.021497855998632076
NKQASPRI	8	Unmodified	_NKQASPRI_					0	0	0		ENST00000607957.1_1_7:123389592-123389883:+|nuORF	ENST00000607957.1_1_7:123389592-123389883:+|nuORF	ENST00000607957.1_1_7:123389592-123389883:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.26324462890625	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.89494	1	7795	7795		37.159	0	1	1458600			38159	14471	25430	25442	43530	43530					0.054357228488470355
NKQEAKGR	8	Unmodified	_NKQEAKGR_					0	0	0			REV__ENST00000372635.1_2_X:102631496-102632642:+|nuORF	REV__ENST00000372635.1_2_X:102631496-102632642:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7774963378906	2	465.759415	929.504277	-0.11874	-5.5305E-05	-2.3706	-0.0011041	-2.4893	-0.0011594	465.75828836775884	82.74	0.25525	82.806	82.615	82.87	0.065918					7	5	2	0	0	0	0.4196	1	8201	8201		9.7057	0	1	29114	+		38160	25725	25431	25443	43531	43531					0.03670534843467976
NKQFHSRFSL	10	Unmodified	_NKQFHSRFSL_					0	0	0			REV__ENSG00000119938|ENST00000238994|PPP1R3C	REV__ENSG00000119938|ENST00000238994|PPP1R3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.8913879394531	3	421.891278	1262.652	0.086923	3.6672E-05	0.035112	1.4813E-05	0.12204	5.1486E-05	421.8912283543651	28.979	0.91446	29.091	28.756	29.67	0.11225					126	46	4	0	0	0	0.86348	1	1225	1225		29.551	0	1	973080	+		38161	18388	25432	25444	43532	43532					0.0311842637747759
NKQFNRIIHQ	10	Unmodified	_NKQFNRIIHQ_					0	0	0			REV__ENSG00000146221|ENST00000371505|TCTE1	REV__ENSG00000146221|ENST00000371505|TCTE1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	649.3659057617188	2	649.359828	1296.7051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.896	1	62.004	61.504	62.504	0.10743								0	0	0	0.45132	1	5383	5383		32.812	0.061884	1		+		38162	19995	25433	25445	43533	43533					0.06861804160143947
NKQHKAELK	9	Unmodified	_NKQHKAELK_					0	0	0		nc|ENSG00000159267|P50747|HLCS;ENSG00000159267|ENST00000674895|HLCS	nc|ENSG00000159267|P50747|HLCS	nc|ENSG00000159267|P50747|HLCS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.3170776367188	2	548.317097	1094.61964	0.21619	0.00011854	1.865	0.0010226	2.0812	0.0011411	548.3180679357306	109.47	0.36328	109.59	109.45	109.81	0.1229					29	17	2	0	0	0	0.7932	1	11780	11780		24.203	2.2429	1	1143700			38163	5520	25434	25446	43534	43534					0.07611638974458401
NKQIRYAS	8	Unmodified	_NKQIRYAS_					0	0	0			REV__ENSG00000111799|ENST00000322507|COL12A1	REV__ENSG00000111799|ENST00000322507|COL12A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	490.26849365234375	2	490.269616	978.524678	-0.67207	-0.0003295	-1.9797	-0.00097057	-2.6517	-0.0013001	490.26866249477763	83.997	2.9917	84.163	83.319	86.311	0.1651					132	69	2	0	0	0	0.86288	1	8191	8191		26.796	1.222	1	268130	+		38164	17895	25435	25447	43535	43535					0.03455705503267836
NKQISMKLW	9	Unmodified	_NKQISMKLW_					0	0	0		chr4:56518853-56523725|16|12.0|0.03|8.47|+|0|ARL9,None|1	chr4:56518853-56523725|16|12.0|0.03|8.47|+|0|ARL9,None|1	chr4:56518853-56523725|16|12.0|0.03|8.47|+|0|ARL9,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.3175048828125	2	574.318251	1146.62195	0.86619	0.00049747	1.1987	0.00068841	2.0648	0.0011859	574.3187940214558	94.229	3.3168	94.661	93.47	96.787	0.4324					197	83	3	0	0	0	0.71772	1	11280	11280		39.253	2.8061	1	1024500			38165	427	25436	25448	43536	43536					0.05450351387912633
NKQIVIIEF	9	Unmodified	_NKQIVIIEF_					0	0	0			REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|77|3|sense	REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|77|3|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3055419921875	2	552.326599	1102.63865	0.26294	0.00014523	-4.2263	-0.0023343	-3.9633	-0.0021891	552.3239563027394	93.764	0.37928	93.992	93.658	94.037	0.22863					12	8	2	0	0	0	0.20789	1	9518	9518		42.396	10.866	1	72458	+		38166	29494	25437	25449	43537	43537					0.09143175545523263
NKQKKKTGVM	10	Oxidation (M)	_NKQKKKTGVM(Oxidation (M))_		NKQKKKTGVM(1)		NKQKKKTGVM(46)	0	0	1		nc|ENSG00000171456|Q8IXJ9-2|ASXL1;ENSG00000171456|ENST00000375687|ASXL1	nc|ENSG00000171456|Q8IXJ9-2|ASXL1	nc|ENSG00000171456|Q8IXJ9-2|ASXL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3426513671875	2	589.339715	1176.66488	2.2135	0.0013045	2.8816	0.0016982	5.0951	0.0030027	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.67571	1	9797	9797		45.972	11.8	1	5579200			38167	6666	25438	25450	43538	43538		113			0.08361121445341269
NKQKKKTGVM	10	Oxidation (M)	_NKQKKKTGVM(Oxidation (M))_		NKQKKKTGVM(1)		NKQKKKTGVM(51)	0	0	1		nc|ENSG00000171456|Q8IXJ9-2|ASXL1;ENSG00000171456|ENST00000375687|ASXL1	nc|ENSG00000171456|Q8IXJ9-2|ASXL1	nc|ENSG00000171456|Q8IXJ9-2|ASXL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3428344726562	2	589.339715	1176.66488	0.80964	0.00047716	4.3421	0.002559	5.1517	0.0030361	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.57924	2	9226	9226;9431		51.193	17.02	1	6634500			38168	6666	25438	25450	43539;43540	43539		113			0.08361121445341269
NKQKQAQL	8	Unmodified	_NKQKQAQL_					0	0	0		ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2776794433594	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.84341	1	7851	7851		24.203	2.2429	1	4644500			38169	11831	25439	25451	43541	43541					0.06031992020314192
NKQKQAQL	8	Unmodified	_NKQKQAQL_					0	0	0		ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2776794433594	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.87479	2	8059	8059;8209		38.806	0	1	1929800			38170	11831	25439	25451	43542;43543	43542					0.06031992020314192
NKQKQAQL	8	Unmodified	_NKQKQAQL_					0	0	0		ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2773742675781	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.84341	1	8300	8300		24.203	0	1	2070000			38171	11831	25439	25451	43544	43544					0.06031992020314192
NKQKQAQL	8	Unmodified	_NKQKQAQL_					0	0	0		ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2773742675781	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.87922	1	8524	8524		31.955	2.8053	1	7289200			38172	11831	25439	25451	43545	43545					0.06031992020314192
NKQKQAQL	8	Unmodified	_NKQKQAQL_					0	0	0		ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2777099609375	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.84341	1	7939	7939		24.203	2.2429	1	2142700			38173	11831	25439	25451	43546	43546					0.06031992020314192
NKQKQAQL	8	Unmodified	_NKQKQAQL_					0	0	0		ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27752685546875	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.89962	1	8430	8430		38.806	5.9937	1	7438100			38174	11831	25439	25451	43547	43547					0.06031992020314192
NKQKQAQL	8	Unmodified	_NKQKQAQL_					0	0	0		ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2775573730469	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.84341	3	7980	7859;7932;7980		31.955	2.8053	1	1802300			38175	11831	25439	25451	43548;43549;43550	43550					0.06031992020314192
NKQKQAQL	8	Unmodified	_NKQKQAQL_					0	0	0		ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	ENST00000445846.1_1_10:17735221-17735257:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2773742675781	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.87922	1	7806	7806		31.955	5.2619	1	1785900			38176	11831	25439	25451	43551	43551					0.06031992020314192
NKQLLKTSN	9	Unmodified	_NKQLLKTSN_					0	0	0			REV__ENST00000458048.1_1_1:77660646-77660778:+|nuORF	REV__ENST00000458048.1_1_1:77660646-77660778:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.7932	1	8871	8871		25.574	0	1	12189000	+		38177	26980	25440	25452	43552	43552					0.07224530363305348
NKQLLKTSN	9	Unmodified	_NKQLLKTSN_					0	0	0			REV__ENST00000458048.1_1_1:77660646-77660778:+|nuORF	REV__ENST00000458048.1_1_1:77660646-77660778:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3030395507812	2	523.303655	1044.59276	0.60955	0.00031898	-0.6954	-0.00036391	-0.085851	-4.4926E-05	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.76764	1	10058	10058		34.173	0	1	4023800	+		38178	26980	25440	25452	43553	43553					0.07224530363305348
NKQNAIPI	8	Unmodified	_NKQNAIPI_					0	0	0			REV__ENST00000436772.1_1_1:155168332-155170164:+|nuORF	REV__ENST00000436772.1_1_1:155168332-155170164:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2591552734375	2	449.261259	896.507966	0.057954	2.6037E-05	-1.3536	-0.00060812	-1.2956	-0.00058208	449.2605008010548	66.1	1.0485	66.652	66.2	67.248	0.5526					65	29	3	0	0	0	0.86791	1	7259	7259		28.254	0.37203	1	957500	+		38179	26694	25441	25453	43554	43554					0.055572046173210765
NKQNWRMQTP	10	Unmodified	_NKQNWRMQTP_					0	0	0			REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|160|3|sense	REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|160|3|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7789001464844	3	434.883906	1301.62989	0.38464	0.00016727	-0.14121	-6.1411E-05	0.24343	0.00010586	435.2195928712673	61.91	0.36903	62.031	61.744	62.113	0.1209					18	13	2	0	0	0	0.37624	1	5368	5368		30.569	11.306	1	120320	+		38180	29567	25442	25454	43555	43555					-0.008861213626232711
NKQQCAEESDS	11	Unmodified	_NKQQCAEESDS_					0	0	0			REV__ENSG00000156269|ENST00000286794|NAA11	REV__ENSG00000156269|ENST00000286794|NAA11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.7511596679688	2	619.751324	1237.48809	1.6347	0.0010131	-1.3027	-0.00080737	0.33202	0.00020577	619.7504572575316	94.167	0.96803	94.599	94.393	95.361	0.4324					50	24	3	0	0	0	0.68532	1	11233	11233		33.922	1.1092	1	1473600	+		38181	20478	25443	25455	43556	43556					-0.12115003966277982
NKQQCAEESDS	11	Unmodified	_NKQQCAEESDS_					0	0	0			REV__ENSG00000156269|ENST00000286794|NAA11	REV__ENSG00000156269|ENST00000286794|NAA11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.7510986328125	2	619.751324	1237.48809	0.63076	0.00039091	-0.13001	-8.0576E-05	0.50075	0.00031034	619.7510263476051	94.34	0.69038	94.775	94.514	95.204	0.43539					41	17	3	0	0	0	0.61369	1	11292	11292		42.864	8.9426	1	1516200	+		38182	20478	25443	25455	43557	43557					-0.12115003966277982
NKQRKQLVLL	10	Unmodified	_NKQRKQLVLL_					0	0	0			REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9329528808594	3	413.934706	1238.78229	-1.896	-0.00078482	-2.7964	-0.0011575	-4.6924	-0.0019423	413.93352675822	43.019	1.5308	43.025	42.029	43.559	0.0057487					104	42	4	0	0	0	0.86698	1	2950	2950		28.081	2.9555	1	469080	+		38183	25749	25444	25456	43558	43558					0.1724502237645993
NKQRKQLVLL	10	Unmodified	_NKQRKQLVLL_					0	0	0			REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26666259765625	3	413.934706	1238.78229	0.25159	0.00010414	-3.1559	-0.0013063	-2.9043	-0.0012022	413.9329534265751	47.381	0.71396	47.419	46.878	47.592	0.037731					37	19	3	0	0	0	0.37624	1	3494	3494		28.081	12.075	1	143690	+		38184	25749	25444	25456	43559	43559					0.1724502237645993
NKQRKRAYG	9	Unmodified	_NKQRKRAYG_					0	0	0			REV__nc|ENSG00000246774|Q6ZST2|COL25A1-DT	REV__nc|ENSG00000246774|Q6ZST2|COL25A1-DT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8198852539062	2	560.820338	1119.62612	-1.1548	-0.00064764	0.17668	9.9087E-05	-0.97813	-0.00054855	560.8203192234314	92.561	2.9962	92.631	91.312	94.308	0.06987					218	70	4	0	0	0	0.58151	1	9589	9589		47.916	0.25827	1	775670	+		38185	30234	25445	25457	43560	43560					0.07109576925836336
NKQSIKVTV	9	Unmodified	_NKQSIKVTV_					0	0	0			REV__ENSG00000165092|ENST00000297785|ALDH1A1	REV__ENSG00000165092|ENST00000297785|ALDH1A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.80645751953125	2	508.808574	1015.60259	-0.68521	-0.00034864	-0.65536	-0.00033345	-1.3406	-0.00068209	508.8081192090242	89.422	0.79648	89.892	89.476	90.273	0.47068					37	19	2	0	0	0	0.69624	1	10614	10614		40.778	1.5253	1	1252700	+		38186	21146	25446	25458	43561	43561					0.09541718368654983
NKQSNLKLG	9	Unmodified	_NKQSNLKLG_					0	0	0			REV__ENSG00000179630|ENST00000325686|LACC1	REV__ENSG00000179630|ENST00000325686|LACC1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.28955078125	2	501.290548	1000.56654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.559	1	90.029	89.529	90.529	0.47068								0	0	0	0.29796	1	10616	10616		31.53	1.0262	1		+		38187	22348	25447	25459	43562	43562					0.06628261191804086
NKQSVRVIPAP	11	Unmodified	_NKQSVRVIPAP_					0	0	0		ENST00000436447.5_1_16:90046667-90060229:+|nuORF;ENST00000437774.5_1_16:90046667-90055262:+|nuORF;ENST00000421164.5_1_16:90046667-90051085:+|nuORF;ENST00000557444.5_1_16:90046667-90055099:+|nuORF;ENST00000418696.5_2_16:90046667-90060229:+|nuORF;ENST00000458301.5_1_16:90048197-90060229:+|nuORF	ENST00000436447.5_1_16:90046667-90060229:+|nuORF	ENST00000436447.5_1_16:90046667-90060229:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5750732421875	3	403.575178	1207.70371	-1.6629	-0.0006711	0.8656	0.00034934	-0.79728	-0.00032176	403.57547967124447	80.497	0.77847	80.602	80.13	80.909	0.10526					53	23	3	0	0	0	0.74022	1	7638	7638		24.232	3.9168	1	234030			38188	11721	25448	25460	43563	43563					0.10816170071393572
NKQTNKQK	8	Unmodified	_NKQTNKQK_					0	0	0		AluSx_dup21537|chr3:101682071-101682382:+|2.5884454401846946|0.0009609046054555|11.4|51.0|6|2|sense	AluSx_dup21537|chr3:101682071-101682382:+|2.5884454401846946|0.0009609046054555|11.4|51.0|6|2|sense	AluSx_dup21537|chr3:101682071-101682382:+|2.5884454401846946|0.0009609046054555|11.4|51.0|6|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.77874755859375	2	494.780348	987.546142	-1.0197	-0.00050453	0.84608	0.00041862	-0.17362	-8.5904E-05	494.78063343938777	84.197	2.1372	84.197	83.134	85.271	0					93	51	2	0	0	0	0.89962	1	7847	7847		38.806	0	1	184680			38189	8	25449	25461	43564	43564					0.05187090532001548
NKQYKLLSI	9	Unmodified	_NKQYKLLSI_					0	0	0			REV__ENST00000515764.2_1_4:25930809-25931061:+|nuORF	REV__ENST00000515764.2_1_4:25930809-25931061:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8301391601562	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.78983	1	9035	9035		27.882	0	1	6402500	+		38190	28040	25450	25462	43565	43565					0.10094577919812764
NKQYKLLSI	9	Unmodified	_NKQYKLLSI_					0	0	0			REV__ENST00000515764.2_1_4:25930809-25931061:+|nuORF	REV__ENST00000515764.2_1_4:25930809-25931061:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.829833984375	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.77244	1	8896	8896		32.812	0	1	2008100	+		38191	28040	25450	25462	43566	43566					0.10094577919812764
NKQYSLRA	8	Unmodified	_NKQYSLRA_					0	0	0			REV__nc|ENSG00000134762|Q14574-2|DSC3	REV__nc|ENSG00000134762|Q14574-2|DSC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	490.2679748535156	2	490.269616	978.524678	-0.67207	-0.0003295	-1.9797	-0.00097057	-2.6517	-0.0013001	490.26866249477763	83.997	2.9917	84.163	83.319	86.311	0.1651					132	69	2	0	0	0	0.91977	1	8228	8228		45.952	10.751	1	268130	+		38192	19164	25451	25463	43567	43567					0.03455705503279205
NKRAVQGP	8	Unmodified	_NKRAVQGP_					0	0	0		nc|ENSG00000102524|Q9Y275-3|TNFSF13B;nc|ENSG00000102524|Q9Y275-2|TNFSF13B;ENSG00000102524|ENST00000375887|TNFSF13B	nc|ENSG00000102524|Q9Y275-3|TNFSF13B	nc|ENSG00000102524|Q9Y275-3|TNFSF13B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.251220703125	2	435.251226	868.487899	-1.3354	-0.00058123	1.6938	0.00073721	0.35838	0.00015599	435.2518916713919	77.486	2.837	77.486	75.833	78.67	0					195	121	3	0	0	0	0.884	1	7098	7098		33.516	1.5607	1	487350			38193	2006	25452	25464	43568	43568					0.04839453677379879
NKRDSFYNC	9	Unmodified	_NKRDSFYNC_					0	0	0			REV__nc|ENSG00000084093|Q13127-4|REST	REV__nc|ENSG00000084093|Q13127-4|REST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.7535400390625	2	573.753472	1145.49239	-0.70536	-0.0004047	-3.2809	-0.0018824	-3.9863	-0.0022871	573.7513757456961	30.419	0.50616	30.444	30.175	30.681	0.025013					20	13	2	0	0	0	0.78983	1	1574	1574		27.882	0.83493	1	54377	+		38194	16868	25453	25465	43569	43569					-0.07453449962008563
NKRFARMV	8	Unmodified	_NKRFARMV_					0	0	0			REV__ENSG00000133983|ENST00000389912|COX16	REV__ENSG00000133983|ENST00000389912|COX16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2838745117188	2	511.289828	1020.5651	-0.35785	-0.00018296	-2.9005	-0.001483	-3.2583	-0.0016659	511.28697083087127	86.044	0.12284	86.229	86.126	86.249	0.18523					4	2	2	0	0	0	0.4196	1	8426	8426		13.775	0	1	41926	+		38195	19107	25454	25466	43570	43570					0.05564348622056059
NKRFLARVF	9	Unmodified	_NKRFLARVF_					0	0	0		nc|ENSG00000154822|Q9UPR0-2|PLCL2;nc|ENSG00000154822|Q9UPR0-3|PLCL2;ENSG00000154822|ENST00000615277|PLCL2	nc|ENSG00000154822|Q9UPR0-2|PLCL2	nc|ENSG00000154822|Q9UPR0-2|PLCL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8428344726562	2	575.845825	1149.6771	-0.49921	-0.00028747	-4.4356	-0.0025542	-4.9348	-0.0028417	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.77546	1	8852	8852		31.955	3.8734	1	1518700			38196	5299	25455	25467	43571	43571					0.1082452597070187
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9726257324219	3	478.973384	1433.89832	-1.6788	-0.00080411	3.2689	0.0015657	1.5901	0.0007616	479.3090926937771	44.658	1.9564	44.658	43.823	45.779	0					118	47	4	0	0	0	0.78683	1	3368	3368		14.086	0.57807	1	394570	+		38197	21174	25456	25468	43572	43572					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9752197265625	3	478.973384	1433.89832	-1.6535	-0.00079198	3.9148	0.0018751	2.2613	0.0010831	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.78683	1	3485	3485		14.086	0	1	252010	+		38198	21174	25456	25468	43573	43573					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9741516113281	3	478.973384	1433.89832	0.22007	0.00010541	1.4347	0.00068717	1.6548	0.00079258	478.9740845349807	44.981	2.0928	44.958	43.729	45.822	-0.023079					123	48	4	0	0	0	0.74405	1	3501	3501		23.378	9.2919	1	463950	+		38199	21174	25456	25468	43574	43574					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9752197265625	3	478.973384	1433.89832	0.11282	5.404E-05	2.5878	0.0012395	2.7006	0.0012935	478.9744667412385	47.884	1.3902	47.875	47.036	48.427	-0.0093231					71	41	3	0	0	0	0.80813	1	3970	3970		9.6461	0.84683	1	396300	+		38200	21174	25456	25468	43575	43575					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3090515136719	3	478.973384	1433.89832	0.11282	5.404E-05	2.5878	0.0012395	2.7006	0.0012935	478.9744667412385	47.884	1.3902	47.875	47.036	48.427	-0.0093231					71	41	3	0	0	0	0.18066	1	3929	3929		9.6461	0	1	396300	+		38201	21174	25456	25468	43576	43576					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3077392578125	3	478.973384	1433.89832	-0.79395	-0.00038028	3.0915	0.0014807	2.2975	0.0011005	478.9747699681175	46.852	2.0236	46.823	45.583	47.607	-0.028782					130	52	3	0	0	0	0.81219	1	3808	3808		8.7993	0.39205	1	237090	+		38202	21174	25456	25468	43577	43577					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.97412109375	3	478.973384	1433.89832	-1.712	-0.00081998	3.2199	0.0015422	1.5079	0.00072226	479.3091273555825	44.793	1.4619	44.789	44.201	45.663	-0.0041618					103	33	5	0	0	0	0.80813	1	3554	3554		9.6461	0.84683	1	653120	+		38203	21174	25456	25468	43578	43578					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9741516113281	3	478.973384	1433.89832	-1.3068	-0.00062591	3.7757	0.0018085	2.469	0.0011826	478.9750986281663	49.151	3.7005	49.151	47.803	51.503	0.00016785					187	96	3	0	0	0	0.76579	1	4327	4327		18.531	8.8849	1	240410	+		38204	21174	25456	25468	43579	43579					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.75274658203125	3	478.973384	1433.89832	-1.5591	-0.00074677	4.3816	0.0020987	2.8225	0.0013519	478.9753069820362	54.854	1.4806	54.881	54.109	55.59	0.027142					73	43	3	0	0	0	0.181	1	4984	4984		5.6988	0	1	186030	+		38205	21174	25456	25468	43580	43580					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3092956542969	3	478.973384	1433.89832	-0.91417	-0.00043786	2.5827	0.001237	1.6685	0.00079918	478.9746832148069	43.078	1.9449	43.084	42.148	44.093	0.0057487					98	52	3	0	0	0	0.7896	2	2932	2922;2932		13.508	3.8618	1	330000	+		38206	21174	25456	25468	43581;43582	43582					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3094787597656	3	478.973384	1433.89832	-0.90815	-0.00043498	3.264	0.0015634	2.3558	0.0011284	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.7896	1	3278	3278		13.508	4.2961	1	368580	+		38207	21174	25456	25468	43583	43583					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97515869140625	3	478.973384	1433.89832	-0.89818	-0.00043021	3.5722	0.001711	2.674	0.0012808	478.9750533889841	51.817	1.8474	51.852	50.982	52.829	0.034588					134	56	3	0	0	0	0.76251	1	4203	4203		19.263	9.6165	1	276750	+		38208	21174	25456	25468	43584	43584					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9808044433594	3	478.973384	1433.89832	-0.87611	-0.00041963	3.5128	0.0016825	2.6367	0.0012629	478.97493608424577	63.878	0.46339	63.998	63.763	64.226	0.12004					40	21	3	0	0	0	0.79224	1	5621	5621		12.957	1.9593	1	87395	+		38209	21174	25456	25468	43585	43585					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.974365234375	3	478.973384	1433.89832	0.26149	0.00012524	1.5738	0.00075381	1.8353	0.00087905	478.9741674058618	42.954	1.6917	43.019	42.201	43.892	0.065037					93	45	3	0	0	0	0.78683	1	2954	2954		14.086	0	1	530890	+		38210	21174	25456	25468	43586	43586					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9741516113281	3	478.973384	1433.89832	0.29105	0.00013941	2	0.00095795	2.2911	0.0010974	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.7896	2	3486	3387;3486		13.508	3.404	1	395190	+		38211	21174	25456	25468	43587;43588	43588					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.311279296875	3	478.973384	1433.89832	0.30578	0.00014646	2.3764	0.0011382	2.6822	0.0012847	478.97445511920006	47.863	1.3107	47.901	47.243	48.554	0.037731					72	41	3	0	0	0	0.7896	1	3624	3624		13.508	1.5756	1	244030	+		38212	21174	25456	25468	43589	43589					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3083190917969	3	478.973384	1433.89832	0.34157	0.0001636	2.1071	0.0010093	2.4487	0.0011729	478.9743151753571	51.804	1.1678	51.863	51.373	52.541	0.059719					70	37	2	0	0	0	0.84494	1	4141	4141		6.3209	0	1	347520	+		38213	21174	25456	25468	43590	43590					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97119140625	3	478.973384	1433.89832	0.41435	0.00019846	1.9079	0.00091386	2.3223	0.0011123	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.81021	1	5266	5266		9.2118	0.41249	1	131420	+		38214	21174	25456	25468	43591	43591					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97674560546875	3	478.973384	1433.89832	-0.085377	-4.0893E-05	1.9381	0.0009283	1.8527	0.0008874	479.30837143687245	43.044	1.6592	42.994	42.147	43.806	-0.050308					106	44	4	0	0	0	0.78683	1	2913	2913		14.086	5.6788	1	375540	+		38215	21174	25456	25468	43592	43592					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3101806640625	3	478.973384	1433.89832	-0.20548	-9.8418E-05	2.5121	0.0012032	2.3066	0.0011048	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.78683	4	3288	3279;3288;3314;3421		14.086	4.7086	1	468190	+		38216	21174	25456	25468	43593;43594;43595;43596	43594					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3086853027344	3	478.973384	1433.89832	-0.315	-0.00015088	2.7524	0.0013183	2.4374	0.0011675	478.9746652956354	49.514	1.8124	49.42	48.44	50.252	-0.093178					109	43	3	0	0	0	0.7896	2	3918	3855;3918		13.508	7.1871	1	294110	+		38217	21174	25456	25468	43597;43598	43598					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.976318359375	3	478.973384	1433.89832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.884	1	59.884	59.384	60.384	0.00051117								0	0	0	0.56276	1	5161	5161		13.508	3.404	1		+		38218	21174	25456	25468	43599	43599					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9736022949219	3	478.973384	1433.89832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.274	1	60.275	59.775	60.775	0.00051117								0	0	0	0.56276	1	5212	5212		9.2118	0	1		+		38219	21174	25456	25468	43600	43600					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.3074645996094	3	478.973384	1433.89832	-1.5701	-0.00075202	2.0995	0.0010056	0.52947	0.0002536	479.30847879064856	41.431	1.1581	41.845	41.508	42.666	0.4139					113	30	5	0	0	0	0.8498	1	3658	3658		6.001	0.30226	1	5661300	+		38220	21174	25456	25468	43601	43601					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	478.973384	1433.89832	-1.712	-0.00081998	3.2199	0.0015422	1.5079	0.00072226	479.3091273555825	44.793	1.4619	44.789	44.201	45.663	-0.0041618	0.012259	0.0012861	NaN	23.378	103	33	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	653120	+		38221	21174	25456	25468							0.19872965947138255
NKRKKKGHQ	9	Unmodified	_NKRKKKGHQ_					0	0	0			REV__ENSG00000157653|ENST00000374165|C9orf43	REV__ENSG00000157653|ENST00000374165|C9orf43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	562.344482421875	2	562.343981	1122.67341	0.77292	0.00043465	-1.4167	-0.00079666	-0.64375	-0.00036201	562.3430494101636	90.476	3.0468	90.629	89.657	92.704	0.15388					171	72	3	0	0	0	0.7932	1	9179	9179		7.1934	0	1	591570	+		38222	20557	25457	25469	43602	43602					0.11697856196838075
NKRKQLSD	8	Unmodified	_NKRKQLSD_					0	0	0			REV__ENST00000392686.6_1_3:178977460-178977592:-|nuORF	REV__ENST00000392686.6_1_3:178977460-178977592:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7803649902344	2	494.780348	987.546142	-0.60063	-0.00029718	0.65872	0.00032592	0.05809	2.8742E-05	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.87479	1	8412	8412		30.504	6.3009	1	707910	+		38223	26026	25458	25470	43603	43603					0.051870905319901794
NKRKTRHTG	9	Unmodified	_NKRKTRHTG_					0	0	0		ENSG00000131127|ENST00000240499|ZNF141	ENSG00000131127|ENST00000240499|ZNF141	ENSG00000131127|ENST00000240499|ZNF141	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3175048828125	2	549.317963	1096.62137	0.23279	0.00012788	-0.87871	-0.00048269	-0.64592	-0.00035481	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.7932	1	10575	10575		24.519	0.99649	1	3004300			38224	3716	25459	25471	43604	43604					0.0769269278309821
NKRLIVFG	8	Unmodified	_NKRLIVFG_					0	0	0			REV__nc|ENSG00000175166|Q13200-2|PSMD2	REV__nc|ENSG00000175166|Q13200-2|PSMD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	473.79278564453125	2	473.795269	945.575986	-0.90661	-0.00042955	-3.2775	-0.0015529	-4.1841	-0.0019824	473.7935811689232	88.742	1.3999	88.949	88.549	89.948	0.20731					73	32	4	0	0	0	0.80706	1	8828	8828		19.36	2.655	1	337240	+		38225	22044	25460	25472	43605	43605					0.1010207426800207
NKRLPALLEKN	11	Unmodified	_NKRLPALLEKN_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2;nc|ENSG00000123104|Q14571-2|ITPR2;ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1;ENST00000467056.5_1_3:4536161-4687445:+|nuORF	ENSG00000123104|ENST00000381340|ITPR2;ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5975646972656	3	432.597983	1294.77212	-1.5737	-0.00068079	1.9561	0.00084622	0.3824	0.00016543	432.59875141375613	106.97	1.3878	107.11	106.64	108.03	0.13866					68	34	2	0	0	0	0.76699	1	11570	11570		34.087	12.306	1	21235000			38226	5087;1741;3260	25461	25473	43606	43606					0.13652414651232903
NKRLPALLEKN	11	Unmodified	_NKRLPALLEKN_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2;nc|ENSG00000123104|Q14571-2|ITPR2;ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1;ENST00000467056.5_1_3:4536161-4687445:+|nuORF	ENSG00000123104|ENST00000381340|ITPR2;ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.5976867675781	3	432.597983	1294.77212	0.73472	0.00031784	-0.49869	-0.00021573	0.23603	0.00010211	432.59773549861245	107.06	1.3761	107.15	106.64	108.02	0.091263					138	33	6	0	0	0	0.7434	1	11422	11422		39.873	17.312	1	14015000			38227	5087;1741;3260	25461	25473	43607	43607					0.13652414651232903
NKRNIQGA	8	Unmodified	_NKRNIQGA_					0	0	0		L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|78|3|sense	L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|78|3|sense	L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|78|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7549133300781	2	450.754133	899.493713	0.58167	0.00026219	-0.53401	-0.00024071	0.047657	2.1482E-05	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.87479	1	7644	7644		30.504	5.9996	1	285810			38228	14541	25462	25474	43608	43608					0.03994552189033129
NKRPRRGQ	8	Unmodified	_NKRPRRGQ_					0	0	0			REV__ENSG00000188282|ENST00000697321|RUFY4	REV__ENSG00000188282|ENST00000697321|RUFY4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3002014160156	2	506.299573	1010.58459	-0.77581	-0.00039279	3.5086	0.0017764	2.7328	0.0013836	506.3012917024536	96.808	1.2917	96.808	96.218	97.509	0					69	29	3	0	0	0	0.85277	1	9668	9668		25.45	0.93098	1	235960	+		38229	22989	25463	25475	43609	43609					0.07972440957178151
NKRQPLRA	8	Unmodified	_NKRQPLRA_					0	0	0		ENST00000452042.1_1_3:49022609-49022810:-|nuORF	ENST00000452042.1_1_3:49022609-49022810:-|nuORF	ENST00000452042.1_1_3:49022609-49022810:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958984375	2	491.798875	981.583196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.927	1	59.96	59.46	60.46	0.032822								0	0	0	0.30316	1	5556	5556		42.474	11.971	1				38230	11912	25464	25476	43610	43610					0.09166806868415733
NKRRMYQIY	9	Unmodified	_NKRRMYQIY_					0	0	0			REV__nc|ENSG00000125952|P61244-3|MAX	REV__nc|ENSG00000125952|P61244-3|MAX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.5608825683594	3	424.560763	1270.66046	-0.25982	-0.00011031	0.31497	0.00013372	0.05515	2.3414E-05	424.5609168516135	27.601	1.5742	27.504	27.094	28.669	-0.096945					107	36	4	0	0	0	0.78528	1	1600	1600		29.17	3.1067	1	4915400	+		38231	18684	25465	25477	43611	43611					0.03595657022447085
NKRRRRRRRQ	10	Unmodified	_NKRRRRRRRQ_					0	0	0			REV__ENST00000607809.5_1_12:54472874-54474119:-|nuORF	REV__ENST00000607809.5_1_12:54472874-54474119:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.9802551269531	3	494.645546	1480.91481	-0.72365	-0.00035795	2.359	0.0011669	1.6353	0.00080891	494.64675912184777	18.139	0.71388	18.184	18.028	18.742	0.044048					78	34	4	0	0	0	0.85441	1	301	301		20.837	7.3292	1	503220	+		38232	29392	25466	25478	43612	43612					0.1935890467648278
NKRRTKTIF	9	Unmodified	_NKRRTKTIF_					0	0	0		ENSG00000137766|ENST00000260323|UNC13C;ENST00000561210.1_1_15:54556427-54709226:+|nuORF	ENSG00000137766|ENST00000260323|UNC13C	ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353515625	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.7932	1	12703	12703		17.365	2.5001	1	3937500			38233	4233	25467	25479	43613	43613					0.11863607136797327
NKRTPRKTPK	10	Unmodified	_NKRTPRKTPK_					0	0	0			REV__ENST00000400485.5_1_21:37732534-37734518:+|nuORF	REV__ENST00000400485.5_1_21:37732534-37734518:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.2711181640625	3	409.254439	1224.74149	0.12499	5.1151E-05	-0.4438	-0.00018163	-0.31882	-0.00013048	409.25425086744684	29.019	0.56355	28.99	28.693	29.257	-0.029207					19	12	2	0	0	0	0.37624	1	1803	1803		35.178	9.1148	1	141170	+		38234	26249	25468	25480	43614	43614					0.13810681056816065
NKRWNSLEA	9	Unmodified	_NKRWNSLEA_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.2976684570312	2	559.291079	1116.56761	-0.44592	-0.0002494	1.3813	0.00077254	0.93536	0.00052314	559.2912299092993	59.159	0.33398	59.551	59.318	59.652	0.39209					11	7	2	0	0	0	0.20789	1	6231	6231		21.96	0	1	126060			38235	4108	25469	25481	43615	43615					0.013984755606998078
NKSEVCECRNN	11	Unmodified	_NKSEVCECRNN_					0	0	0		nc|ENSG00000165055|Q6P1Q9-2|METTL2B;ENST00000482555.5_1_7:128117100-128141967:+|nuORF;ENSG00000165055|ENST00000262432|METTL2B	nc|ENSG00000165055|Q6P1Q9-2|METTL2B	nc|ENSG00000165055|Q6P1Q9-2|METTL2B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5976257324219	3	432.520416	1294.53942	-1.575	-0.00068124	-0.83232	-0.00036	-2.4074	-0.0010412	432.5197072794917	106.06	0.31482	106.2	106.07	106.39	0.14843					11	7	2	0	0	0	0.17244	1	11365	11365		37.6	20.433	1	78146			38236	6041	25470	25482	43616	43616					-0.09606958473182203
NKSFTNKY	8	Unmodified	_NKSFTNKY_					0	0	0			REV__ENST00000501011.6_1_11:82784563-82784683:+|nuORF	REV__ENST00000501011.6_1_11:82784563-82784683:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2574768066406	2	501.256174	1000.49779	-1.4721	-0.00073792	2.7083	0.0013576	1.2362	0.00061964	501.25746640332557	72.811	0.74078	73.197	72.834	73.575	0.38582					47	17	3	0	0	0	0.91005	1	8144	8144		42.474	5.3154	1	682560	+		38237	27810	25471	25483	43617	43617					-0.002434031079133092
NKSHIVSIKII	11	Unmodified	_NKSHIVSIKII_					0	0	0			REV__nc|ENSG00000115155|Q9HC10-5|OTOF	REV__nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.906982421875	3	417.930962	1250.77106	1.2358	0.00051649	-0.49697	-0.0002077	0.73886	0.00030879	417.9303800068229	19.939	0.28043	19.469	19.35	19.63	-0.46967					8	5	2	0	0	0	0.17375	1	580	580		24.232	2.5461	1	15231	+		38238	18089	25472	25484	43618	43618					0.15570200282309088
NKSHIVSIKII	11	Unmodified	_NKSHIVSIKII_					0	0	0			REV__nc|ENSG00000115155|Q9HC10-5|OTOF	REV__nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	417.930962	1250.77106	-1.9193	-0.00080214	4.7261	0.0019752	2.8068	0.0011731	418.26805222677814	19.678	0.09911	19.722	19.644	19.743	0.043749	0.16889	0.00038968	NaN	24.232	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23109	+		38239	18089	25472	25484							0.15570200282309088
NKSLKRDP	8	Unmodified	_NKSLKRDP_					0	0	0			REV__ENSG00000104903|ENST00000264824|LYL1	REV__ENSG00000104903|ENST00000264824|LYL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2782287597656	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.90707	1	7713	7713		41.427	5.8083	1	1785900	+		38240	17487	25473	25485	43619	43619					0.06031992020314192
NKSLSTWQP	9	Unmodified	_NKSLSTWQP_					0	0	0		ENSG00000147130|ENST00000314425|ZMYM3;nc|ENSG00000147130|Q14202-2|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7735595703125	2	530.774731	1059.53491	-0.035163	-1.8664E-05	-1.0719	-0.00056894	-1.1071	-0.0005876	530.77394427409	79.457	0.80801	80.007	79.658	80.466	0.54945					37	18	3	0	0	0	0.21969	1	9145	9145		71.877	5.4482	1	703840			38241	4884	25474	25486	43620	43620					0.007522684378500344
NKSPILNRA	9	Unmodified	_NKSPILNRA_					0	0	0			REV__chr15:24968082-24971379|17|20.65|0.0|20.98|+|0|SNURF,None|1	REV__chr15:24968082-24971379|17|20.65|0.0|20.98|+|0|SNURF,None|1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.79925537109375	2	506.79854	1011.58253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.003	1	42.953	42.453	43.453	-0.050308								0	0	0	0.31437	1	2930	2930		25.574	1.0549	1		+		38242	15612	25475	25487	43621	43621					0.07719967428704422
NKSPPIRKSS	10	Unmodified	_NKSPPIRKSS_					0	0	0			REV__ENST00000436893.1_1_X:38660915-38663110:-|nuORF	REV__ENST00000436893.1_1_X:38660915-38663110:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.32177734375	2	557.32238	1112.63021	0.92324	0.00051454	-1.4255	-0.00079445	-0.50224	-0.00027991	557.3215749749198	28.011	0.62528	27.988	27.768	28.393	-0.023558					25	14	3	0	0	0	0.67571	1	1318	1318		45.972	9.5255	1	63353	+		38243	26698	25476	25488	43622	43622					0.07839621628886562
NKSVKAPVA	9	Unmodified	_NKSVKAPVA_					0	0	0			REV__ENST00000476339.1_1_5:140896420-140903812:-|nuORF	REV__ENST00000476339.1_1_5:140896420-140903812:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7930908203125	2	457.276909	912.539266	0.20141	9.2098E-05	-0.097757	-4.4702E-05	0.10365	4.7396E-05	457.27771477059014	38.713	0.16691	38.807	38.69	38.857	0.094322					5	4	2	0	0	0	0.20789	1	2316	2316		42.396	11.892	1	22027	+		38244	18956	25477	25489	43623	43623					0.07949777651424483
NKSVRKPA	8	Unmodified	_NKSVRKPA_					0	0	0		ENST00000009589.7_1_8:56986710-56987027:-|nuORF	ENST00000009589.7_1_8:56986710-56987027:-|nuORF	ENST00000009589.7_1_8:56986710-56987027:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2744445800781	2	450.274701	898.534849	-1.7762	-0.00079979	1.8456	0.00083102	0.069358	3.123E-05	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.84341	1	12098	12098		24.203	1.1603	1	2494900			38245	9067	25478	25490	43624	43624					0.08152313228515595
NKTAILRN	8	Unmodified	_NKTAILRN_					0	0	0			REV__ENSG00000183508|ENST00000369448|TENT5C	REV__ENSG00000183508|ENST00000369448|TENT5C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.2799987792969	2	465.279983	928.545414	-0.11899	-5.5362E-05	0.19844	9.2329E-05	0.079452	3.6968E-05	465.2799248826243	89.079	2.3276	89.147	88.595	90.922	0.068161					120	54	4	0	0	0	0.89043	1	9101	9101		35.618	0	1	1620100	+		38246	22610	25479	25491	43625	43625					0.07828295882939074
NKTGTTVQTF	10	Unmodified	_NKTGTTVQTF_					0	0	0		ENSG00000164744|ENST00000297325|SUN3;nc|ENSG00000164744|Q8TAQ9-2|SUN3;nc|ENSG00000164744|Q8TAQ9-3|SUN3	ENSG00000164744|ENST00000297325|SUN3	ENSG00000164744|ENST00000297325|SUN3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.373779296875	2	548.785296	1095.55604	-0.038395	-2.1071E-05	0.2333	0.00012803	0.19491	0.00010696	548.7851524522167	35.716	0.36507	35.66	35.468	35.834	-0.055901					13	7	2	0	0	0	0.37624	1	2305	2305		27.882	6.9353	1	26004			38247	5999	25480	25492	43626	43626					0.012082337467063553
NKTHIICM	8	Carbamidomethyl (C)	_NKTHIIC(Carbamidomethyl (C))M_	NKTHIIC(1)M		NKTHIIC(58)M		0	1	0		ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7560729980469	2	508.75443	1015.49431	-0.43112	-0.00021933	3.5152	0.0017884	3.0841	0.001569	508.75606889010743	63.729	0.69307	64.116	63.79	64.483	0.38681					38	15	3	0	0	0	0.88944	1	6886	6886		57.811	13.28	1	328910			38248	8508	25481	25493	43627	43627	105				-0.012821124777815385
NKTISPPPAP	10	Unmodified	_NKTISPPPAP_					0	0	0		nc|ENSG00000106948|Q7Z591-5|AKNA;nc|ENSG00000106948|Q7Z591-8|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA;nc|ENSG00000106948|Q7Z591-2|AKNA;ENSG00000106948|ENST00000374088|AKNA	nc|ENSG00000106948|Q7Z591-5|AKNA	nc|ENSG00000106948|Q7Z591-5|AKNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.28546142578125	2	511.287474	1020.5604	0.36299	0.00018559	-1.6305	-0.00083365	-1.2675	-0.00064806	511.28657650841876	42.002	2.0595	41.971	41.461	43.521	-0.030987					111	49	5	0	0	0	0.77314	1	3171	3171		40.778	5.1599	1	6140800			38249	2323	25482	25494	43628	43628					0.05093742960275449
NKTKESKKGT	10	Unmodified	_NKTKESKKGT_					0	0	0			REV__nc|ENSG00000171466|Q6V9R5-2|ZNF562	REV__nc|ENSG00000171466|Q6V9R5-2|ZNF562	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.8197021484375	2	560.81967	1119.62479	0.38825	0.00021774	-0.19482	-0.00010926	0.19343	0.00010848	560.8194818178797	92.394	2.729	92.618	91.343	94.072	0.22352					209	64	4	0	0	0	0.86106	1	9355	9355		33.922	1.1092	1	816880	+		38250	21732	25483	25495	43629	43629					0.06975898046425755
NKTKNKKTT	9	Unmodified	_NKTKNKKTT_					0	0	0		L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8167724609375	2	531.81693	1061.61931	-0.57494	-0.00030576	0.81538	0.00043363	0.24044	0.00012787	531.8173324364058	101.39	0.86312	101.39	101.04	101.9	0					47	20	3	0	0	0	0.75725	1	10338	10338		36.447	2.5251	1	388100			38251	14613	25484	25496	43630	43630					0.0909621925461579
NKTKNKKTT	9	Unmodified	_NKTKNKKTT_					0	0	0		L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8165893554688	2	531.81693	1061.61931	1.595	0.00084823	-1.7275	-0.00091871	-0.13254	-7.0485E-05	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.7932	1	8940	8940		26.693	3.6504	1	1345000			38252	14613	25484	25496	43631	43631					0.0909621925461579
NKTKNKKTT	9	Unmodified	_NKTKNKKTT_					0	0	0		L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8168334960938	2	531.81693	1061.61931	1.8637	0.00099113	-2.0038	-0.0010657	-0.14016	-7.454E-05	531.8157444108199	88.686	4.0119	88.613	87.337	91.349	-0.07238					352	95	5	0	0	0	0.7932	2	9287	9287;9395		26.693	3.6504	1	4423300			38253	14613	25484	25496	43632;43633	43632					0.0909621925461579
NKTKNKKTT	9	Unmodified	_NKTKNKKTT_					0	0	0		L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8167724609375	2	531.81693	1061.61931	1.1723	0.00062347	-1.3006	-0.00069169	-0.12827	-6.8217E-05	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.76764	1	9233	9233		34.173	6.2903	1	4413000			38254	14613	25484	25496	43634	43634					0.0909621925461579
NKTKNKKTT	9	Unmodified	_NKTKNKKTT_					0	0	0		L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8187255859375	2	531.81693	1061.61931	-0.053058	-2.8217E-05	-0.23896	-0.00012709	-0.29202	-0.0001553	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.64555	3	8348	8348;8496;8628		44.377	11.565	1	1422300			38255	14613	25484	25496	43635;43636;43637	43635					0.0909621925461579
NKTKNKKTT	9	Unmodified	_NKTKNKKTT_					0	0	0		L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8170776367188	2	531.81693	1061.61931	0.70533	0.00037511	-0.90544	-0.00048153	-0.20011	-0.00010642	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.7932	1	8436	8436		26.693	3.6504	1	1163300			38256	14613	25484	25496	43638	43638					0.0909621925461579
NKTKNKKTT	9	Unmodified	_NKTKNKKTT_					0	0	0		L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.81689453125	2	531.81693	1061.61931	0.7269	0.00038658	-0.87822	-0.00046705	-0.15132	-8.0475E-05	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.7932	1	8815	8815		26.693	5.746	1	4496300			38257	14613	25484	25496	43639	43639					0.0909621925461579
NKTKNKKTT	9	Unmodified	_NKTKNKKTT_					0	0	0		L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8167724609375	2	531.81693	1061.61931	0.49482	0.00026316	-0.62472	-0.00033224	-0.1299	-6.908E-05	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.58668	1	10108	10108		47.657	14.142	1	1227700			38258	14613	25484	25496	43640	43640					0.0909621925461579
NKTKNKKTT	9	Unmodified	_NKTKNKKTT_					0	0	0		L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8170166015625	2	531.81693	1061.61931	1.0704	0.00056928	-1.0589	-0.00056316	0.011518	6.1253E-06	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.76764	2	10347	10347;10383		34.173	7.3764	1	4490200			38259	14613	25484	25496	43641;43642	43641					0.0909621925461579
NKTKNKKTT	9	Unmodified	_NKTKNKKTT_					0	0	0		L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8170776367188	2	531.81693	1061.61931	2.0148	0.0010715	-1.7845	-0.00094901	0.23032	0.00012249	531.8159372106508	100.77	1.2932	101.07	100.14	101.44	0.2999					63	31	3	0	0	0	0.7932	1	12236	12236		24.519	2.5593	1	532290			38260	14613	25484	25496	43643	43643					0.0909621925461579
NKTKNKKTT	9	Unmodified	_NKTKNKKTT_					0	0	0		L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	L1PA14_dup233|chr1:247162627-247164968:+|1.0662147972737748|0.3887194544737339|1.46|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8169555664062	2	531.81693	1061.61931	-1.264	-0.00067223	1.2536	0.00066671	-0.010392	-5.5265E-06	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.7932	1	10475	10475		26.693	3.6504	1	4586300			38261	14613	25484	25496	43644	43644					0.0909621925461579
NKTKWEGR	8	Unmodified	_NKTKWEGR_					0	0	0		ENST00000420058.1_2_7:102628891-102629017:+|nuORF	ENST00000420058.1_2_7:102628891-102629017:+|nuORF	ENST00000420058.1_2_7:102628891-102629017:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.77447509765625	2	509.775065	1017.53558	0.060354	3.0767E-05	-1.4071	-0.00071729	-1.3467	-0.00068652	509.77425964055743	37.039	0.66885	37.015	36.636	37.305	-0.023979					22	14	2	0	0	0	0.92394	1	2419	2419		47.657	1.6851	1	121460			38262	11445	25485	25497	43645	43645					0.02751107877566028
NKTLLRFV	8	Unmodified	_NKTLLRFV_					0	0	0			REV__ENSG00000106546|ENST00000242057|AHR	REV__ENSG00000106546|ENST00000242057|AHR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.80657958984375	2	495.808377	989.6022	-0.072972	-3.618E-05	-4.0378	-0.002002	-4.1108	-0.0020382	495.80633218090117	91.181	1.8649	91.25	90.804	92.669	0.069328					89	44	3	0	0	0	0.884	1	9403	9403		33.516	5.2613	1	621650	+		38263	17617	25486	25498	43646	43646					0.10698343439457858
NKTLLRFV	8	Unmodified	_NKTLLRFV_					0	0	0			REV__ENSG00000106546|ENST00000242057|AHR	REV__ENSG00000106546|ENST00000242057|AHR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.8059997558594	2	495.808377	989.6022	-0.57039	-0.0002828	-3.7409	-0.0018548	-4.3113	-0.0021376	495.8065300685273	90.913	2.2012	90.959	90.595	92.796	0.046448					94	52	3	0	0	0	0.884	1	9446	9446		33.516	0.70317	1	659920	+		38264	17617	25486	25498	43647	43647					0.10698343439457858
NKTLRTKN	8	Unmodified	_NKTLRTKN_					0	0	0			REV__ENSG00000111962|ENST00000367463|UST	REV__ENSG00000111962|ENST00000367463|UST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7904968261719	2	487.790715	973.566878	-1.3135	-0.00064074	1.1066	0.00053979	-0.20694	-0.00010094	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.87479	1	8562	8562		30.504	1.3541	1	2239000	+		38265	17908	25487	25499	43648	43648					0.0790368091164737
NKTLRTKN	8	Unmodified	_NKTLRTKN_					0	0	0			REV__ENSG00000111962|ENST00000367463|UST	REV__ENSG00000111962|ENST00000367463|UST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.79071044921875	2	487.790715	973.566878	-0.48923	-0.00023864	0.34108	0.00016637	-0.14815	-7.2268E-05	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.89043	2	9758	9758;9832		38.806	1.647	1	1599600	+		38266	17908	25487	25499	43649;43650	43649					0.0790368091164737
NKTTIRIIN	9	Unmodified	_NKTTIRIIN_					0	0	0		nc|ENSG00000144057|Q96JF0-2|ST6GAL2;ENSG00000144057|ENST00000409382|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2810668945312	2	536.827298	1071.64004	-0.60712	-0.00032592	-3.7717	-0.0020248	-4.3788	-0.0023507	536.8250583159033	48.257	0.32742	49.174	49.015	49.342	0.91677					10	7	2	0	0	0	0.20789	1	4677	4677		30.318	0	1	82666			38267	4686	25488	25500	43651	43651					0.10708809634297722
NKTVEEVY	8	Unmodified	_NKTVEEVY_					0	0	0		nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79553706-79569486:-|nuORF;nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5	nc|ENSG00000151208|Q8TDM6-4|DLG5	nc|ENSG00000151208|Q8TDM6-4|DLG5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2490234375	2	491.248015	980.481476	-0.35827	-0.000176	0.36076	0.00017722	0.002487	1.2217E-06	491.2480641110002	49.675	0.86356	50.134	49.789	50.653	0.45983					42	20	3	0	0	0	0.92973	1	4873	4873		50.025	2.1089	1	1413100			38268	5101	25489	25501	43652	43652					-0.009545290646656213
NKTVEEVY	8	Unmodified	_NKTVEEVY_					0	0	0		nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79553706-79569486:-|nuORF;nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5	nc|ENSG00000151208|Q8TDM6-4|DLG5	nc|ENSG00000151208|Q8TDM6-4|DLG5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.24755859375	2	491.248015	980.481476	0.44943	0.00022078	-0.36733	-0.00018045	0.082099	4.0331E-05	491.2476788316303	49.518	0.7767	50.363	50.074	50.851	0.84501					39	18	3	0	0	0	0.37614	2	4833	4833;4844		88.643	14.668	1	1328800			38269	5101	25489	25501	43653;43654	43653					-0.009545290646656213
NKTVRPPQ	8	Unmodified	_NKTVRPPQ_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.27203369140625	2	470.272158	938.529764	-1.0259	-0.00048243	0.96935	0.00045586	-0.056507	-2.6574E-05	470.27263416214146	92.531	3.2683	92.531	91.425	94.693	0					153	75	5	0	0	0	0.84341	1	9057	9057		24.203	2.2429	1	1224900	+		38270	26788	25490	25502	43655	43655					0.058040093658974
NKTVTKRQ	8	Unmodified	_NKTVTKRQ_					0	0	0		chr16:11877580-11880068|17|20.24|0.81|4.65|-|1|TE_info:L1MB2,L1MB2_dup7118,L1,LINE,donor,-,11880068,11880490|GSPT1,None|10	chr16:11877580-11880068|17|20.24|0.81|4.65|-|1|TE_info:L1MB2,L1MB2_dup7118,L1,LINE,donor,-,11880068,11880490|GSPT1,None|10	chr16:11877580-11880068|17|20.24|0.81|4.65|-|1|TE_info:L1MB2,L1MB2_dup7118,L1,LINE,donor,-,11880068,11880490|GSPT1,None|10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.79071044921875	2	487.790715	973.566878	-1.0481	-0.00051127	1.0168	0.00049598	-0.03133	-1.5283E-05	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.86677	1	7814	7814		27.882	3.6795	1	1176800			38271	198	25491	25503	43656	43656					0.0790368091164737
NKVAKNKV	8	Unmodified	_NKVAKNKV_					0	0	0			REV__nc|ENSG00000260811|A6NMZ5|OR4C45	REV__nc|ENSG00000260811|A6NMZ5|OR4C45	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2720031738281	2	450.784902	899.55525	1.3139	0.00059229	1.961	0.00088401	3.275	0.0014763	450.78544434925897	109.96	0.15814	110.01	109.88	110.04	0.054054					9	5	2	0	0	0	0.4196	1	13300	13300		12.207	0	1	303900	+		38272	30251	25492	25504	43657	43657					0.10145483888322815
NKVIKSASATA	11	Unmodified	_NKVIKSASATA_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3174438476562	2	545.316763	1088.61897	1.26	0.0006871	-0.8331	-0.0004543	0.4269	0.0002328	545.3161515624204	102.43	0.93845	102.48	101.97	102.91	0.043198					60	22	4	0	0	0	0.68532	1	11076	11076		33.922	4.7721	1	907160			38273	1550	25493	25505	43658	43658					0.07820799534761136
NKVIKSASATA	11	Unmodified	_NKVIKSASATA_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	545.316763	1088.61897	-0.33879	-0.00018475	0.97555	0.00053199	0.63677	0.00034724	545.3170953984753	102.68	0.92177	102.69	102.27	103.19	0.0082092	0.12491	0.001442	NaN	33.922	56	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	978870			38274	1550	25493	25505							0.07820799534761136
NKVIKSASATA	11	Unmodified	_NKVIKSASATA_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	545.316763	1088.61897	3.5512	0.0019366	-3.2928	-0.0017956	0.25845	0.00014093	545.3148041335187	102.59	0.81557	102.54	102.1	102.91	-0.047005	-0.020871	-0.0032132	NaN	33.922	57	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	893830			38275	1550	25493	25505							0.07820799534761136
NKVIKSASATA	11	Unmodified	_NKVIKSASATA_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	545.316763	1088.61897	0.17427	9.5032E-05	0.32928	0.00017956	0.50354	0.00027459	545.316816043683	102.32	0.75961	102.51	102.18	102.94	0.19483	-0.05099	0.00073713	NaN	33.922	50	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	780540			38276	1550	25493	25505							0.07820799534761136
NKVIKSASATA	11	Unmodified	_NKVIKSASATA_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	545.316763	1088.61897	0.84697	0.00046187	-0.30164	-0.00016449	0.54534	0.00029738	545.316390453559	102.43	0.68108	102.57	102.26	102.94	0.13523	0.0025448	4.9039E-05	NaN	33.922	50	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	760760			38277	1550	25493	25505							0.07820799534761136
NKVIKSASATA	11	Unmodified	_NKVIKSASATA_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	545.316763	1088.61897	-1.4674	-0.00080021	1.8771	0.0010236	0.40969	0.00022341	545.3176417519013	102.39	0.76109	102.53	102.22	102.98	0.13569	-0.03796	0.0024252	NaN	33.922	48	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	587250			38278	1550	25493	25505							0.07820799534761136
NKVKLDQKRL	10	Unmodified	_NKVKLDQKRL_					0	0	0		ENSG00000198088|ENST00000372466|NUP62CL	ENSG00000198088|ENST00000372466|NUP62CL	ENSG00000198088|ENST00000372466|NUP62CL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.3929443359375	2	621.388054	1240.76155	4.2384	0.0026337	3.5756	0.0022219	7.814	0.0048555	621.3901654110842	104.31	1.8962	104.53	104.05	105.95	0.2268					124	45	4	0	0	0	0.85834	1	12698	12698		22.58	0.89391	1	1273000			38279	8236	25494	25506	43659	43659					0.15080431996784682
NKVKSVVMVVF	11	Oxidation (M)	_NKVKSVVM(Oxidation (M))VVF_		NKVKSVVM(1)VVF		NKVKSVVM(50)VVF	0	0	1		nc|ENSG00000158055|Q8TE85-3|GRHL3;ENSG00000158055|ENST00000361548|GRHL3;nc|ENSG00000158055|Q8TE85-2|GRHL3;nc|ENSG00000158055|Q8TE85|GRHL3;nc|ENSG00000158055|Q8TE85-4|GRHL3	nc|ENSG00000158055|Q8TE85-3|GRHL3	nc|ENSG00000158055|Q8TE85-3|GRHL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3690795898438	2	633.367941	1264.72133	1.4714	0.00093196	0.41942	0.00026564	1.8909	0.0011976	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.53361	1	10204	10204		49.536	18.006	1	11430000			38280	5459	25495	25507	43660	43660		96			0.09955749282016768
NKVLLWAN	8	Unmodified	_NKVLLWAN_					0	0	0			REV__ENSG00000131864|ENST00000254181|USP29	REV__ENSG00000131864|ENST00000254181|USP29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27691650390625	2	479.279452	956.544351	-0.77651	-0.00037216	-3.5504	-0.0017016	-4.3269	-0.0020738	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.87922	1	8954	8954		31.955	5.1588	1	7040000	+		38281	18973	25496	25508	43661	43661					0.06434081514032641
NKVLRLSGG	9	Unmodified	_NKVLRLSGG_					0	0	0		ENST00000330048.9_1_16:32893302-32893952:-|nuORF;nc|ENSG00000130821|P48029-4|SLC6A8;ENSG00000130821|ENST00000253122|SLC6A8	ENST00000330048.9_1_16:32893302-32893952:-|nuORF	ENST00000330048.9_1_16:32893302-32893952:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28741455078125	2	472.287808	942.561064	-1.7052	-0.00080535	2.0866	0.00098547	0.38138	0.00018012	472.2887688366916	99.113	1.9296	99.299	98.808	100.74	0.18582					95	44	3	0	0	0	0.69624	1	10256	10256		40.778	10.46	1	583920			38282	3690	25497	25509	43662	43662					0.08748582400005489
NKVLRLSGG	9	Unmodified	_NKVLRLSGG_					0	0	0		ENST00000330048.9_1_16:32893302-32893952:-|nuORF;nc|ENSG00000130821|P48029-4|SLC6A8;ENSG00000130821|ENST00000253122|SLC6A8	ENST00000330048.9_1_16:32893302-32893952:-|nuORF	ENST00000330048.9_1_16:32893302-32893952:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	472.287808	942.561064	1.5888	0.00075036	-1.0247	-0.00048395	0.56408	0.00026641	472.28741481383486	98.923	0.7094	99.284	98.774	99.484	0.36137	-0.034097	-0.0015824	NaN	40.778	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	180710			38283	3690	25497	25509							0.08748582400005489
NKVSLSDDL	9	Unmodified	_NKVSLSDDL_					0	0	0			REV__nc|ENSG00000119844|Q6ULP2-7|AFTPH	REV__nc|ENSG00000119844|Q6ULP2-7|AFTPH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.2602844238281	2	495.758746	989.50294	-1.9425	-0.00096301	4.1451	0.002055	2.2026	0.001092	495.7602537576442	19.302	1.1114	19.302	18.834	19.945	0					76	43	2	0	0	0	0.7932	1	375	375		25.574	1.3713	1	56551	+		38284	18380	25498	25510	43663	43663					0.007768559640567219
NKVSTPTK	8	Unmodified	_NKVSTPTK_					0	0	0			REV__ENST00000427401.8_1_19:20726300-20726477:-|nuORF	REV__ENST00000427401.8_1_19:20726300-20726477:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26214599609375	2	437.753267	873.491981	-0.051688	-2.2626E-05	-3.9474	-0.001728	-3.9991	-0.0017506	437.75205880919145	40.303	0.54754	40.312	39.858	40.405	0.0092773					18	12	2	0	0	0	0.4196	1	2833	2833		29.17	6.5904	1	40102	+		38285	26562	25499	25511	43664	43664					0.05017498380414054
NKVTADADAII	11	Unmodified	_NKVTADADAII_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.8058471679688	2	565.806228	1129.5979	-0.5712	-0.00032319	-3.3093	-0.0018724	-3.8805	-0.0021956	565.8039818963895	61.203	0.44581	61.592	61.467	61.912	0.38945					20	13	2	0	0	0	0.55601	1	6526	6526		47.96	5.0953	1	233140	+		38286	23147	25500	25512	43665	43665					0.038287894352379226
NKVVLKHLKKT	11	Unmodified	_NKVVLKHLKKT_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.62152099609375	3	436.62224	1306.84489	0.31417	0.00013717	-2.3209	-0.0010133	-2.0067	-0.00087617	436.62114528618645	20.352	0.976	19.723	19.397	20.373	-0.6296					57	21	4	0	0	0	0.74405	1	650	650		23.378	4.1152	1	358780			38287	8866	25501	25513	43666	43666					0.2037416844461859
NKWVLLHLP	9	Unmodified	_NKWVLLHLP_					0	0	0			REV__ENSG00000076513|ENST00000261739|ANKRD13A	REV__ENSG00000076513|ENST00000261739|ANKRD13A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.33740234375	2	560.337301	1118.66005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.454	1	39.543	39.043	40.043	0.088375								0	0	0	0.31088	1	2422	2422		26.796	4.8362	1		+		38288	16726	25502	25514	43667	43667					0.10546605364902462
NKYGEDSCK	9	Unmodified	_NKYGEDSCK_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.2280883789062	2	522.226756	1042.43896	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.264	1	75.659	75.159	76.159	0.39507								0	0	0	0.30416	1	8507	8507		29.15	4.6304	1				38289	5333	25503	25515	43668	43668					-0.08056247464537591
NKYKIAIF	8	Unmodified	_NKYKIAIF_					0	0	0			REV__ENST00000486698.1_1_7:91948745-91949191:+|nuORF	REV__ENST00000486698.1_1_7:91948745-91949191:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.795654296875	2	498.797478	995.580402	-0.00081578	-4.0691E-07	-2.5284	-0.0012612	-2.5292	-0.0012616	498.7960129710008	20.608	0.77453	19.979	19.718	20.493	-0.6296					40	18	3	0	0	0	0.86791	1	688	688		28.254	7.3073	1	174900	+		38290	27557	25504	25516	43669	43669					0.08243538690874175
NKYRLECRRRV	11	Unmodified	_NKYRLECRRRV_					0	0	0		ENST00000265087.8_1_5:172744311-172744497:-|nuORF	ENST00000265087.8_1_5:172744311-172744497:-|nuORF	ENST00000265087.8_1_5:172744311-172744497:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.2822570800781	3	498.280771	1491.82048	-0.31981	-0.00015936	4.4119	0.0021984	4.0921	0.002039	498.28281696075425	33.521	0.85828	33.465	33.146	34.004	-0.056385					51	19	4	0	0	0	0.72374	1	2039	2039		27.644	9.8108	1	181970			38291	9496	25505	25517	43670	43670					0.09424585019428378
NLAAILLP	8	Unmodified	_NLAAILLP_					0	0	0		ENST00000529980.5_1_11:47159254-47177376:+|nuORF	ENST00000529980.5_1_11:47159254-47177376:+|nuORF	ENST00000529980.5_1_11:47159254-47177376:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2664794921875	2	412.765646	823.516739	1.2445	0.00051368	-1.8023	-0.00074392	-0.55779	-0.00023024	412.76609709283645	41.289	1.0546	41.296	40.74	41.795	0.0065727					35	27	2	0	0	0	0.86791	1	3000	3000		28.254	1.4582	1	169780			38292	13335	25506	25518	43671	43671					0.09792178253792372
NLAAILLP	8	Unmodified	_NLAAILLP_					0	0	0		ENST00000529980.5_1_11:47159254-47177376:+|nuORF	ENST00000529980.5_1_11:47159254-47177376:+|nuORF	ENST00000529980.5_1_11:47159254-47177376:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2658996582031	2	412.765646	823.516739	-0.62558	-0.00025822	2.0435	0.0008435	1.4179	0.00058528	412.7673203899957	51.451	2.0511	51.366	50.837	52.888	-0.084538					105	61	2	0	0	0	0.87807	1	4073	4073		31.579	1.7373	1	311840			38293	13335	25506	25518	43672	43672					0.09792178253792372
NLAFLALPVKL	11	Unmodified	_NLAFLALPVKL_					0	0	0			REV__nc|ENSG00000124299|P12955-3|PEPD	REV__nc|ENSG00000124299|P12955-3|PEPD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	600.0492553710938	2	599.881542	1197.74853	1.0874	0.00065232	1.9426	0.0011653	3.03	0.0018177	600.3840689842202	21.189	0.16173	21.172	21.111	21.272	-0.016428					9	6	2	0	0	0	0.17714	1	562	562		19.104	5.6495	1	68644	+		38294	18578	25507	25519	43673	43673					0.15756600884697036
NLAGARTP	8	Unmodified	_NLAGARTP_					0	0	0		ENSG00000167978|ENST00000301740|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.22418212890625	2	400.224677	798.434801	2.9548	0.0011826	-0.74024	-0.00029626	2.2146	0.00088633	400.2242637097153	16.502	0.2907	16.418	16.23	16.52	-0.083364					18	13	2	0	0	0	0.80706	1	141	141		19.36	1.0356	1	66597			38295	6348	25508	25520	43674	43674					0.027520758947048307
NLAGLRRGLG	10	Unmodified	_NLAGLRRGLG_					0	0	0			REV__ENSG00000138080|ENST00000380320|EMILIN1	REV__ENSG00000138080|ENST00000380320|EMILIN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8091430664062	2	513.811982	1025.60941	-1.4174	-0.00072826	-4.4658	-0.0022946	-5.8832	-0.0030229	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.85694	1	4034	4034		21.96	2.5999	1	1977600	+		38296	19437	25509	25521	43675	43675					0.09763076039894258
NLAKTAPVM	9	Unmodified	_NLAKTAPVM_					0	0	0			REV__ENSG00000152580|ENST00000282466|IGSF10	REV__ENSG00000152580|ENST00000282466|IGSF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7669677734375	2	472.76532	943.516088	0.45435	0.0002148	3.2736	0.0015477	3.728	0.0017625	472.7668500235695	81.593	2.4119	81.53	80.267	82.679	-0.062935					139	57	4	0	0	0	0.74721	1	8228	8228		37.159	1.9584	1	232880	+		38297	20306	25510	25522	43676	43676					0.04207015542442605
NLALKEQQPKV	11	Unmodified	_NLALKEQQPKV_					0	0	0		ENSG00000162928|ENST00000295030|PEX13	ENSG00000162928|ENST00000295030|PEX13	ENSG00000162928|ENST00000295030|PEX13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3751220703125	2	634.372069	1266.72959	6.6614	0.0042258	1.1149	0.00070728	7.7763	0.0049331	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.67778	1	13374	13374		35.152	1.2304	1	7041100			38298	5750	25511	25523	43677	43677					0.10689019522965282
NLAPKGRN	8	Unmodified	_NLAPKGRN_					0	0	0		nc|ENSG00000256061|Q8WXU2-3|DNAAF4;ENST00000568310.1_1_15:55677902-55790527:-|nuORF;nc|ENSG00000256061|Q8WXU2-2|DNAAF4;ENST00000565113.5_1_15:55681617-55790527:-|nuORF;ENSG00000256061|ENST00000321149|DNAAF4	nc|ENSG00000256061|Q8WXU2-3|DNAAF4	nc|ENSG00000256061|Q8WXU2-3|DNAAF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25140380859375	2	435.251226	868.487899	0.18475	8.0413E-05	1.8989	0.0008265	2.0837	0.00090692	435.25121288017317	76.886	2.3553	77.455	76.392	78.747	0.56836					103	62	3	0	0	0	0.87479	1	8763	8763		30.504	0	1	485820			38299	15297	25512	25524	43678	43678					0.04839453677379879
NLAQATFNS	9	Unmodified	_NLAQATFNS_					0	0	0			REV__chr4:153397333-153414751|50|17.04|0.21|6.33|+|ENST00000674680|MND1,MND1	REV__chr4:153397333-153414751|50|17.04|0.21|6.33|+|ENST00000674680|MND1,MND1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7276916503906	2	483.237981	964.461409	-0.43004	-0.00020781	0.56324	0.00027218	0.1332	6.4367E-05	483.2381521333413	74.483	0.64883	75.042	74.717	75.366	0.55891					23	15	2	0	0	0	0.20789	1	8416	8416		41.427	0	1	147820	+		38300	15822	25513	25525	43679	43679					-0.022242800046228695
NLAQKHKLKTS	11	Unmodified	_NLAQKHKLKTS_					0	0	0		ENSG00000064933|ENST00000441310|PMS1;nc|ENSG00000064933|P54277-3|PMS1	ENSG00000064933|ENST00000441310|PMS1	ENSG00000064933|ENST00000441310|PMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3767700195312	2	634.377686	1266.74082	1.3188	0.00083664	-1.7871	-0.0011337	-0.46828	-0.00029707	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.7434	1	12717	12717		23.523	0.94304	1	12917000			38301	1114	25514	25526	43680	43680					0.11811841617122809
NLAQKHKLKTS	11	Unmodified	_NLAQKHKLKTS_					0	0	0		ENSG00000064933|ENST00000441310|PMS1;nc|ENSG00000064933|P54277-3|PMS1	ENSG00000064933|ENST00000441310|PMS1	ENSG00000064933|ENST00000441310|PMS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3767700195312	2	634.377686	1266.74082	-1.1774	-0.00074689	0.2391	0.00015168	-0.93826	-0.00059521	634.3776925529805	109.87	1.6182	109.87	109.32	110.94	0.0060425					148	63	3	0	0	0	0.68532	1	11683	11683		33.922	8.3476	1	2778200			38302	1114	25514	25526	43681	43681					0.11811841617122809
NLAQVKWH	8	Unmodified	_NLAQVKWH_					0	0	0			REV__ENST00000398483.7_1_11:73500526-73536828:+|nuORF	REV__ENST00000398483.7_1_11:73500526-73536828:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.4335021972656	2	498.274701	994.534849	-0.18653	-9.2941E-05	-1.0218	-0.00050914	-1.2083	-0.00060208	498.27428068003485	67.051	0.48824	67.602	67.415	67.903	0.55071					21	12	2	0	0	0	0.4196	1	7364	7364		25.45	7.1258	1	323410	+		38303	26205	25515	25527	43682	43682					0.03736313228512245
NLAVHMQDVL	10	Unmodified	_NLAVHMQDVL_					0	0	0			REV__nc|ENSG00000156042|Q5T0N1-2|CFAP70	REV__nc|ENSG00000156042|Q5T0N1-2|CFAP70	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.2951049804688	2	570.297516	1138.58048	0.47185	0.0002691	-3.7707	-0.0021504	-3.2989	-0.0018813	570.2951038965308	61.928	0.56001	62.035	61.772	62.332	0.10743					50	24	3	0	0	0	0.3985	1	5403	5403		64.207	11.271	1	602680	+		38304	20464	25516	25528	43683	43683					0.016731706286009285
NLAVPLQLAAP	11	Unmodified	_NLAVPLQLAAP_					0	0	0			REV__ENSG00000167880|ENST00000301607|EVPL	REV__ENSG00000167880|ENST00000301607|EVPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8305053710938	2	553.832049	1105.64954	0.37109	0.00020552	-3.8764	-0.0021469	-3.5053	-0.0019414	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.69995	1	10467	10467		31.53	2.3598	1	1786500	+		38305	21433	25517	25529	43684	43684					0.10094577919812764
NLAYLKEKNE	10	Unmodified	_NLAYLKEKNE_					0	0	0		nc|ENSG00000144460|Q9P242-2|NYAP2;nc|ENSG00000144460|Q9P242|NYAP2;ENSG00000144460|ENST00000272907|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3306884765625	2	611.327328	1220.6401	-0.40721	-0.00024894	3.6987	0.0022611	3.2915	0.0020122	611.3294350755532	78.668	0.95905	78.724	78.415	79.375	0.056122					53	26	3	0	0	0	0.63899	1	7646	7646		47.96	5.0953	1	307880			38306	4709	25518	25530	43685	43685					0.038607648436027375
NLAYLKEKNE	10	Unmodified	_NLAYLKEKNE_					0	0	0		nc|ENSG00000144460|Q9P242-2|NYAP2;nc|ENSG00000144460|Q9P242|NYAP2;ENSG00000144460|ENST00000272907|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3314819335938	2	611.327328	1220.6401	-0.48859	-0.00029869	3.7666	0.0023026	3.2781	0.002004	611.3295541194741	78.492	1.0319	78.544	78.268	79.3	0.051674					62	27	4	0	0	0	0.76096	1	7752	7752		41.427	5.109	1	361320			38307	4709	25518	25530	43686	43686					0.038607648436027375
NLAYLKEKNE	10	Unmodified	_NLAYLKEKNE_					0	0	0		nc|ENSG00000144460|Q9P242-2|NYAP2;nc|ENSG00000144460|Q9P242|NYAP2;ENSG00000144460|ENST00000272907|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3311767578125	2	611.327328	1220.6401	1.1116	0.00067957	2.0124	0.0012302	3.1241	0.0019098	611.3286276945797	78.517	1.0448	78.644	78.256	79.301	0.12695					71	31	4	0	0	0	0.63899	1	7391	7391		47.96	3.5823	1	448710			38308	4709	25518	25530	43687	43687					0.038607648436027375
NLAYLKEKNE	10	Unmodified	_NLAYLKEKNE_					0	0	0		nc|ENSG00000144460|Q9P242-2|NYAP2;nc|ENSG00000144460|Q9P242|NYAP2;ENSG00000144460|ENST00000272907|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3304443359375	2	611.327328	1220.6401	0.7105	0.00043435	2.4744	0.0015127	3.1849	0.001947	611.3288931083291	78.39	0.975	78.526	78.284	79.259	0.13667					60	27	3	0	0	0	0.38353	1	7404	7404		65.465	15.432	1	454390			38309	4709	25518	25530	43688	43688					0.038607648436027375
NLAYLKEKNE	10	Unmodified	_NLAYLKEKNE_					0	0	0		nc|ENSG00000144460|Q9P242-2|NYAP2;nc|ENSG00000144460|Q9P242|NYAP2;ENSG00000144460|ENST00000272907|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.330322265625	2	611.327328	1220.6401	-0.91837	-0.00056142	3.9793	0.0024327	3.061	0.0018712	611.32977638209	78.511	1.062	78.605	78.288	79.35	0.0942					75	32	4	0	0	0	0.86446	1	7396	7396		30.569	1.3988	1	422640			38310	4709	25518	25530	43689	43689					0.038607648436027375
NLAYLKEKNE	10	Unmodified	_NLAYLKEKNE_					0	0	0		nc|ENSG00000144460|Q9P242-2|NYAP2;nc|ENSG00000144460|Q9P242|NYAP2;ENSG00000144460|ENST00000272907|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	611.327328	1220.6401	-0.48755	-0.00029805	3.4426	0.0021045	2.955	0.0018065	611.3291724658959	78.794	0.35382	78.794	78.573	78.926	0	0.18739	0.00036303	NaN	65.465	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73380			38311	4709	25518	25530							0.038607648436027375
NLAYLKEKNE	10	Unmodified	_NLAYLKEKNE_					0	0	0		nc|ENSG00000144460|Q9P242-2|NYAP2;nc|ENSG00000144460|Q9P242|NYAP2;ENSG00000144460|ENST00000272907|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	611.327328	1220.6401	0.54026	0.00033028	2.4792	0.0015156	3.0195	0.0018459	611.3281837545542	78.092	0.82497	78.497	78.142	78.967	0.40531	-0.10939	-0.00081483	NaN	65.465	42	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	360160			38312	4709	25518	25530							0.038607648436027375
NLAYLKEKNE	10	Unmodified	_NLAYLKEKNE_					0	0	0		nc|ENSG00000144460|Q9P242-2|NYAP2;nc|ENSG00000144460|Q9P242|NYAP2;ENSG00000144460|ENST00000272907|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	nc|ENSG00000144460|Q9P242-2|NYAP2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	611.327328	1220.6401	0.20076	0.00012273	2.8105	0.0017181	3.0112	0.0018408	611.3285189575956	77.989	0.74018	78.553	78.254	78.994	0.56332	-0.054023	-0.00040982	NaN	65.465	41	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	492110			38313	4709	25518	25530							0.038607648436027375
NLCPLRLH	8	Unmodified	_NLCPLRLH_					0	0	0			REV__ENST00000337080.7_1_19:56671600-56671822:+|nuORF	REV__ENST00000337080.7_1_19:56671600-56671822:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7276916503906	2	483.271104	964.527655	-0.42621	-0.00020597	-4.4864	-0.0021681	-4.9126	-0.0023741	483.26891270151543	74.397	0.48824	74.956	74.674	75.162	0.55891					17	11	2	0	0	0	0.4196	1	8416	8416		55.504	5.4797	1	104140	+		38314	25200	25519	25531	43690	43690					0.043972573564246886
NLDLRIRPH	9	Unmodified	_NLDLRIRPH_					0	0	0		ENSG00000183273|ENST00000327554|CCDC60	ENSG00000183273|ENST00000327554|CCDC60	ENSG00000183273|ENST00000327554|CCDC60	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3306274414062	2	567.330539	1132.64652	1.497	0.00084932	-2.8559	-0.0016202	-1.3589	-0.00077092	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.7932	1	9528	9528		23.042	3.0457	1	15259000			38315	7515	25520	25532	43691	43691					0.0855074758567298
NLEDHEWCEN	10	Unmodified	_NLEDHEWCEN_					0	0	0		nc|ENSG00000176463|Q9UIG8-4|SLCO3A1;ENST00000555549.5_1_15:92641439-92706362:+|nuORF;ENSG00000176463|ENST00000318445|SLCO3A1	nc|ENSG00000176463|Q9UIG8-4|SLCO3A1	nc|ENSG00000176463|Q9UIG8-4|SLCO3A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	645.2495727539062	2	644.748584	1287.48262	1.4193	0.00091508	1.8701	0.0012057	3.2894	0.0021208	644.749550611961	28.634	0.95834	28.614	27.982	28.941	-0.019407					36	23	2	0	0	0	0.86587	1	1378	1378		29.17	9.1733	1	29083			38316	7083	25521	25533	43692	43692					-0.14962682758050505
NLEGKPILF	9	Unmodified	_NLEGKPILF_					0	0	0		ENSG00000144182|ENST00000651691|LIPT1	ENSG00000144182|ENST00000651691|LIPT1	ENSG00000144182|ENST00000651691|LIPT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.799072265625	2	515.800217	1029.58588	0.68486	0.00035325	-0.91054	-0.00046965	-0.22568	-0.0001164	515.7996345452923	53.784	0.79634	54.198	53.91	54.706	0.4139					44	18	4	0	0	0	0.41566	1	5474	5474		56.721	3.3696	1	808300			38317	4695	25522	25534	43693	43693					0.07227217482704873
NLEIIILV	8	Unmodified	_NLEIIILV_					0	0	0		ENSG00000128052|ENST00000263923|KDR	ENSG00000128052|ENST00000263923|KDR	ENSG00000128052|ENST00000263923|KDR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8003845214844	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.80706	1	2809	2809		19.36	1.0356	1	489490			38318	3529	25523	25535	43694	43694					0.11905003113815837
NLEIIILV	8	Unmodified	_NLEIIILV_					0	0	0		ENSG00000128052|ENST00000263923|KDR	ENSG00000128052|ENST00000263923|KDR	ENSG00000128052|ENST00000263923|KDR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8009948730469	2	463.799686	925.584819	-1.1872	-0.0005506	2.6442	0.0012264	1.4571	0.00067579	463.80074391702703	41.648	1.5471	41.608	41.079	42.626	-0.039845					90	38	3	0	0	0	0.81567	1	3161	3161		14.865	0	1	510860			38319	3529	25523	25535	43695	43695					0.11905003113815837
NLEKAPLKVLE	11	Unmodified	_NLEKAPLKVLE_					0	0	0		nc|ENSG00000148634|Q5GLZ8-6|HERC4;nc|ENSG00000148634|Q5GLZ8-3|HERC4;ENSG00000148634|ENST00000373700|HERC4;nc|ENSG00000148634|Q5GLZ8|HERC4;ENST00000427635.6_1_10:69747892-69752485:-|nuORF	nc|ENSG00000148634|Q5GLZ8-6|HERC4	nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3877563476562	2	627.37682	1252.73909	6.5832	0.0041301	2.6289	0.0016493	9.2121	0.0057794	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.74763	1	13834	13834		22.58	3.4761	1	94412			38320	4973	25524	25536	43696	43696					0.12282787808521789
NLEKLQPGIKL	11	Unmodified	_NLEKLQPGIKL_					0	0	0			REV__nc|ENSG00000127603|O94854|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1	REV__nc|ENSG00000127603|Q9UPN3|MACF1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.8870239257812	2	626.884813	1251.75507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.65	1	109.66	109.16	110.16	0.0060425								0	0	0	0.56276	1	11685	11685		22.58	0	1		+		38321	18743;29829	25525	25537	43697	43697					0.13926494045426807
NLEKQLICPI	10	Unmodified	_NLEKQLICPI_					0	0	0		nc|ENSG00000147573|Q9BYV6-4|TRIM55;nc|ENSG00000158022|Q969Q1-2|TRIM63;ENSG00000158022|ENST00000374272|TRIM63;ENSG00000138100|ENST00000380075|TRIM54;nc|ENSG00000138100|Q9BYV2-2|TRIM54;nc|ENSG00000147573|Q9BYV6-2|TRIM55;nc|ENSG00000147573|Q9BYV6-3|TRIM55;ENSG00000147573|ENST00000315962|TRIM55	nc|ENSG00000147573|Q9BYV6-4|TRIM55	nc|ENSG00000147573|Q9BYV6-4|TRIM55	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	585.8272705078125	2	585.831191	1169.64783	0.69219	0.00040551	-2.3365	-0.0013688	-1.6443	-0.0009633	585.8297459988387	57.724	1.3091	57.804	57.326	58.635	0.079643					103	61	2	0	0	0	0.85981	1	4894	4894		35.152	2.3396	1	163030			38322	4270	25526	25538	43698	43698					0.06979200839555233
NLESRHERY	9	Unmodified	_NLESRHERY_					0	0	0			REV__ENST00000589504.1_1_19:34856171-34859700:+|nuORF	REV__ENST00000589504.1_1_19:34856171-34859700:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	602.7359619140625	2	602.296893	1202.57923	0.44205	0.00026624	-0.96333	-0.00058021	-0.52128	-0.00031396	602.295736536595	37.41	1.0337	37.896	37.325	38.359	0.4858					47	25	4	0	0	0	0.20789	1	3083	3083		20.947	0	1	354530	+		38323	17514	25527	25539	43699	43699					-0.013953274159348439
NLFAVVCGL	9	Unmodified	_NLFAVVCGL_					0	0	0			REV__ENSG00000113396|ENST00000262462|SLC27A6	REV__ENSG00000113396|ENST00000262462|SLC27A6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2552185058594	2	468.254588	934.494624	0.60478	0.00028319	-0.093062	-4.3577E-05	0.51172	0.00023962	468.25441943244317	81.627	3.5592	81.77	80.781	84.34	0.14352					144	82	2	0	0	0	0.69914	1	8030	8030		40.573	2.7611	1	205460	+		38324	17994	25528	25540	43700	43700					0.02475630513742999
NLFDVQKLL	9	Unmodified	_NLFDVQKLL_					0	0	0			REV__ENSG00000177971|ENST00000403490|IMP3	REV__ENSG00000177971|ENST00000403490|IMP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.316650390625	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.75725	1	10329	10329		36.447	1.2947	1	4868200	+		38325	22242	25529	25541	43701	43701					0.08222889028479585
NLFKQVDLI	9	Unmodified	_NLFKQVDLI_					0	0	0		ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3167724609375	2	545.318774	1088.623	-0.33932	-0.00018504	-3.4934	-0.001905	-3.8327	-0.00209	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.6204	1	9159	9159		45.972	3.5761	1	4710900			38326	3392	25530	25542	43702	43702					0.08222889028479585
NLFKQVDLI	9	Unmodified	_NLFKQVDLI_					0	0	0		ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167724609375	2	545.318774	1088.623	0.15577	8.4944E-05	-3.7365	-0.0020376	-3.5808	-0.0019527	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.44421	4	9354	9142;9184;9318;9354		54.776	8.9351	1	17220000			38327	3392	25530	25542	43703;43704;43705;43706	43706					0.08222889028479585
NLFKQVDLI	9	Unmodified	_NLFKQVDLI_					0	0	0		ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3167114257812	2	545.318774	1088.623	-1.465	-0.00079892	-2.4047	-0.0013113	-3.8697	-0.0021102	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.71772	1	8854	8854		39.253	2.0937	1	4998200			38328	3392	25530	25542	43707	43707					0.08222889028479585
NLFKQVDLI	9	Unmodified	_NLFKQVDLI_					0	0	0		ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.31689453125	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.69624	1	10461	10461		40.778	1.5253	1	4868200			38329	3392	25530	25542	43708	43708					0.08222889028479585
NLFLRRRLMFQ	11	Unmodified	_NLFLRRRLMFQ_					0	0	0		ENSG00000171714|ENST00000324559|ANO5	ENSG00000171714|ENST00000324559|ANO5	ENSG00000171714|ENST00000324559|ANO5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.623779296875	3	498.622246	1492.84491	-1.9133	-0.00095401	3.4254	0.001708	1.5122	0.00075399	498.62386245575794	21.686	1.0367	21.686	21.107	22.144	0					71	45	2	0	0	0	0.76892	1	603	603		17.833	4.3252	1	49754			38330	6699	25531	25543	43709	43709					0.11819845172976784
NLFTLPKRLNK	11	Unmodified	_NLFTLPKRLNK_					0	0	0			REV__ENST00000505443.1_1_5:3422621-3535901:-|nuORF	REV__ENST00000505443.1_1_5:3422621-3535901:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.609130859375	3	448.610111	1342.8085	-1.3124	-0.00058875	-0.37673	-0.000169	-1.6891	-0.00075776	448.6097327049683	74.956	1.1468	75.082	74.623	75.77	0.12545					89	30	4	0	0	0	0.77511	1	6969	6969		16.53	1.1924	1	427440	+		38331	27880	25532	25544	43710	43710					0.15081291547926412
NLGCPSSNR	9	Unmodified	_NLGCPSSNR_					0	0	0			REV__ENSG00000176302|ENST00000317011|FOXR1	REV__ENSG00000176302|ENST00000317011|FOXR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2245178222656	2	474.221808	946.429063	0.65646	0.00031131	2.1701	0.0010291	2.8265	0.0013404	474.2226664298733	66.642	1.4894	67.027	66.622	68.112	0.38541					75	41	3	0	0	0	0.77244	1	7247	7247		32.812	9.7699	1	883560	+		38332	22121	25533	25545	43711	43711					-0.04629390679269818
NLGFLIPKPIK	11	Unmodified	_NLGFLIPKPIK_					0	0	0			REV__nc|ENSG00000133302|Q9BQI6-2|SLF1	REV__nc|ENSG00000133302|Q9BQI6-2|SLF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9324035644531	3	413.932303	1238.77508	1.9789	0.00081913	-0.83989	-0.00034766	1.139	0.00047147	413.9318701140447	44.846	2.3922	44.842	44.201	46.593	-0.0041618					170	56	4	0	0	0	0.77205	1	3520	3520		17.167	0.63689	1	713740	+		38333	29852	25534	25546	43712	43712					0.1652428977602085
NLGIIHTMKVL	11	Unmodified	_NLGIIHTMKVL_					0	0	0		ENSG00000164296|ENST00000296736|TIGD6	ENSG00000164296|ENST00000296736|TIGD6	ENSG00000164296|ENST00000296736|TIGD6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8693237304688	2	619.868108	1237.72166	-0.2143	-0.00013284	2.2388	0.0013877	2.0245	0.0012549	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.70737	1	9274	9274		30.318	0	1	1169100			38334	5947	25535	25547	43713	43713					0.11231169001871422
NLGKCISSVAQ	11	Unmodified	_NLGKCISSVAQ_					0	0	0			REV__ENST00000294753.8_1_1:247493325-247494987:-|nuORF	REV__ENST00000294753.8_1_1:247493325-247494987:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.2896118164062	2	560.294973	1118.57539	1.0412	0.00058337	-3.7065	-0.0020767	-2.6653	-0.0014933	560.2926833895638	28.457	0.56866	28.284	28.02	28.588	-0.17336					25	14	3	0	0	0	0.59499	1	1735	1735		45.022	4.964	1	149090	+		38335	24693	25536	25548	43714	43714					0.020848667659720377
NLGKCISSVAQ	11	Unmodified	_NLGKCISSVAQ_					0	0	0			REV__ENST00000294753.8_1_1:247493325-247494987:-|nuORF	REV__ENST00000294753.8_1_1:247493325-247494987:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	560.294973	1118.57539	1.0412	0.00058337	-3.7065	-0.0020767	-2.6653	-0.0014933	560.2926833895638	28.457	0.56866	28.284	28.02	28.588	-0.17336	0.00896	-0.00043197	NaN	45.022	25	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149090	+		38336	24693	25536	25548							0.020848667659720377
NLGNGIALLV	10	Unmodified	_NLGNGIALLV_					0	0	0		nc|ENSG00000173715|Q8N6T0-5|TOP6BL;ENSG00000173715|ENST00000540737|C11orf80;nc|ENSG00000173715|Q8N6T0-4|TOP6BL;nc|ENSG00000173715|Q8N6T0-1|TOP6BL	nc|ENSG00000173715|Q8N6T0-5|TOP6BL	nc|ENSG00000173715|Q8N6T0-5|TOP6BL	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.295166015625	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.08	1	62.047	61.547	62.547	-0.033173								0	0	0	0.45132	1	5874	5874		34.173	0	1				38337	6882	25537	25549	43715	43715					0.08914333339942004
NLGNLQYD	8	Unmodified	_NLGNLQYD_					0	0	0			REV__nc|ENSG00000153922|O14646-2|CHD1	REV__nc|ENSG00000153922|O14646-2|CHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232971191406	2	468.724707	935.43486	-0.94379	-0.00044238	-1.8848	-0.00088346	-2.8286	-0.0013258	468.7236903113572	85.734	0.90586	86.181	85.782	86.688	0.44736					54	21	3	0	0	0	0.89494	1	10069	10069		37.159	5.2042	1	829770	+		38338	20362	25538	25550	43716	43716					-0.03543968895951366
NLGPLELI	8	Unmodified	_NLGPLELI_					0	0	0		ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	ENSG00000187546|ENST00000342526|AGMO	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7596435546875	2	434.760561	867.506569	-1.1839	-0.00051471	-1.2859	-0.00055904	-2.4698	-0.0010738	434.7597390953803	87.854	3.3898	87.854	86.125	89.515	0					151	78	4	0	0	0	0.87922	1	8444	8444		31.955	0	1	789230			38339	7859	25539	25551	43717	43717					0.06751570528570028
NLGPVRASSA	10	Unmodified	_NLGPVRASSA_					0	0	0			REV__CON__P50446	REV__CON__P50446	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.26702880859375	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.70553	1	8517	8517		44.377	6.5657	1	1702800	+	+	38340	15992	25540	25552	43718	43718					0.03315401640657001
NLGRHIHI	8	Unmodified	_NLGRHIHI_					0	0	0		ENST00000468071.1_1_2:18736459-18741913:-|nuORF;ENSG00000240857|ENST00000381249|RDH14	ENST00000468071.1_1_2:18736459-18741913:-|nuORF	ENST00000468071.1_1_2:18736459-18741913:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2815856933594	2	480.280318	958.546083	2.0773	0.00099766	-0.80311	-0.00038572	1.2741	0.00061195	480.27979970211794	99.254	1.495	99.616	99.254	100.75	0.36136					97	37	4	0	0	0	0.89457	1	12023	12023		37.028	1.8278	1	8902700			38341	8786	25541	25553	43719	43719					0.06515135322649712
NLGRKQKIPWN	11	Unmodified	_NLGRKQKIPWN_					0	0	0		ENSG00000181804|ENST00000316549|SLC9A9	ENSG00000181804|ENST00000316549|SLC9A9	ENSG00000181804|ENST00000316549|SLC9A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9327087402344	3	451.929844	1352.7677	2.5866	0.001169	3.6676	0.0016575	6.2542	0.0028264	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.75121	1	10866	10866		21.78	0.094677	1	1152500			38342	7406	25542	25554	43720	43720					0.1054295022831866
NLGSRGRKVF	10	Unmodified	_NLGSRGRKVF_					0	0	0		nc|ENSG00000203710|P17927|CR1;ENSG00000203710|ENST00000367049|CR1	nc|ENSG00000203710|P17927|CR1	nc|ENSG00000203710|P17927|CR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3302001953125	2	567.330539	1132.64652	0.4851	0.00027521	-1.8618	-0.0010563	-1.3767	-0.00078107	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.8608	1	9666	9666		34.173	0	1	18558000			38343	8390	25543	25555	43721	43721					0.0855074758567298
NLGSRGRKVF	10	Unmodified	_NLGSRGRKVF_					0	0	0		nc|ENSG00000203710|P17927|CR1;ENSG00000203710|ENST00000367049|CR1	nc|ENSG00000203710|P17927|CR1	nc|ENSG00000203710|P17927|CR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3296508789062	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.8651	1	11173	11173		25.574	0	1	6182600			38344	8390	25543	25555	43722	43722					0.0855074758567298
NLGTCLLPEP	10	Unmodified	_NLGTCLLPEP_					0	0	0		ENST00000493550.1_1_1:162372447-162381806:-|nuORF	ENST00000493550.1_1_1:162372447-162381806:-|nuORF	ENST00000493550.1_1_1:162372447-162381806:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.3062744140625	2	528.773342	1055.53213	0.53013	0.00028032	-3.9139	-0.0020695	-3.3837	-0.0017892	528.7711639292768	51.653	0.42362	52.088	51.864	52.288	0.43505					13	9	2	0	0	0	0.37624	1	5161	5161		51.193	15.992	1	152540			38345	12730	25544	25556	43723	43723					0.006586769887007904
NLHENNTHN	9	Unmodified	_NLHENNTHN_					0	0	0		ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8402099609375	2	546.744493	1091.47443	-1.4628	-0.00079979	2.7064	0.0014797	1.2436	0.00067991	546.7458191339266	100.75	0.16457	100.92	100.81	100.98	0.17199					5	3	2	0	0	0	0.20789	1	10465	10465		54.776	13.998	1	37275			38346	7667	25545	25557	43724	43724					-0.06764448892499786
NLHRILAE	8	Unmodified	_NLHRILAE_					0	0	0			REV__nc|ENSG00000288702|P35503-3|UGT1A3	REV__nc|ENSG00000288702|P35503-3|UGT1A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.2785339355469	2	483.279983	964.545414	-0.69726	-0.00033697	-1.7319	-0.00083699	-2.4292	-0.001174	483.2791425455724	95.175	1.9923	95.222	94.662	96.654	0.046982					116	46	3	0	0	0	0.89962	1	10142	10142		38.806	0	1	1260700	+		38347	30291	25546	25558	43725	43725					0.06172295882936396
NLHSLYDI	8	Unmodified	_NLHSLYDI_					0	0	0			REV__ENSG00000176102|ENST00000323959|CSTF3	REV__ENSG00000176102|ENST00000323959|CSTF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.2810363769531	2	487.750724	973.486896	-0.43635	-0.00021283	0.40373	0.00019692	-0.032618	-1.5909E-05	487.75070288497693	49.227	0.69611	49.686	49.459	50.155	0.45983					22	16	2	0	0	0	0.4196	1	4778	4778		26.693	6.6961	1	641770	+		38348	22109	25547	25559	43726	43726					-0.0009080548219344564
NLHTLTKLRGI	11	Unmodified	_NLHTLTKLRGI_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.3880615234375	2	633.388054	1264.76155	-0.16034	-0.00010155	-4.169	-0.0026406	-4.3293	-0.0027421	633.3853861154565	57.138	1.3537	57.109	56.711	58.065	-0.02866					59	39	2	0	0	0	0.6593	1	5266	5266		35.152	13.466	1	143780	+		38349	18979	25548	25560	43727	43727					0.13976431996775318
NLHTLTKLRGI	11	Unmodified	_NLHTLTKLRGI_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	633.388054	1264.76155	-0.68231	-0.00043217	-3.5426	-0.0022439	-4.225	-0.002676	633.3858999230847	57.33	0.8925	57.33	57.076	57.968	0	0.34824	0.00082768	NaN	35.152	42	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47895	+		38350	18979	25548	25560							0.13976431996775318
NLHTLTKLRGI	11	Unmodified	_NLHTLTKLRGI_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	633.388054	1264.76155	1.3946	0.00088333	-5.919	-0.003749	-4.5244	-0.0028657	633.3844715899678	56.692	0.82127	56.764	56.715	57.537	0.071835	-0.21798	-0.0021826	NaN	35.152	67	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	270680	+		38351	18979	25548	25560							0.13976431996775318
NLHTLTKLRGI	11	Unmodified	_NLHTLTKLRGI_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	633.388054	1264.76155	0.53617	0.00033961	-5.0635	-0.0032072	-4.5273	-0.0028675	633.3849798379246	56.607	0.99473	56.706	56.541	57.536	0.099186	-0.2752	-0.0010989	NaN	35.152	67	45	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	231080	+		38352	18979	25548	25560							0.13976431996775318
NLHTLTKLRGI	11	Unmodified	_NLHTLTKLRGI_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	633.388054	1264.76155	-0.074038	-4.6895E-05	-4.3613	-0.0027624	-4.4354	-0.0028093	633.385503176463	56.69	0.87743	56.664	56.474	57.351	-0.026108	-0.31714	-0.0002094	NaN	35.152	63	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	318900	+		38353	18979	25548	25560							0.13976431996775318
NLHTLTKLRGI	11	Unmodified	_NLHTLTKLRGI_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	633.388054	1264.76155	-0.51742	-0.00032773	-6.3043	-0.0039931	-6.8217	-0.0043208	633.3839432972127	56.897	0.12626	57.294	57.203	57.329	0.39672	0.31211	-0.0026707	NaN	35.152	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67720	+		38354	18979	25548	25560							0.13976431996775318
NLHWLHKV	8	Unmodified	_NLHWLHKV_					0	0	0		ENST00000528031.1_1_11:75167699-75188792:-|nuORF	ENST00000528031.1_1_11:75167699-75188792:-|nuORF	ENST00000528031.1_1_11:75167699-75188792:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.2832641601562	2	523.798343	1045.58213	0.97169	0.00050897	-2.8014	-0.0014674	-1.8297	-0.0009584	523.7967666543079	54.527	1.0907	54.933	54.361	55.452	0.40663					48	25	4	0	0	0	0.4196	1	5520	5520		47.916	1.9434	1	3204000			38355	13296	25549	25561	43728	43728					0.061165924995066234
NLHYPLLLILT	11	Unmodified	_NLHYPLLLILT_					0	0	0		ENSG00000143919|ENST00000378494|CAMKMT	ENSG00000143919|ENST00000378494|CAMKMT	ENSG00000143919|ENST00000378494|CAMKMT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.267578125	3	437.267463	1308.78056	0.31383	0.00013723	0.49785	0.00021769	0.81168	0.00035492	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.77511	2	4376	4376;4410		16.53	1.8362	1	2521600			38356	4674	25550	25562	43729;43730	43729					0.1385196856786024
NLHYPLLLILT	11	Unmodified	_NLHYPLLLILT_					0	0	0		ENSG00000143919|ENST00000378494|CAMKMT	ENSG00000143919|ENST00000378494|CAMKMT	ENSG00000143919|ENST00000378494|CAMKMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2672424316406	3	437.267463	1308.78056	-0.13248	-5.7929E-05	0.78917	0.00034508	0.65669	0.00028715	437.26771661657114	51.155	1.5796	51.59	50.873	52.452	0.43505					109	37	4	0	0	0	0.75457	1	5096	5096		21.032	3.8655	1	2614800			38357	4674	25550	25562	43731	43731					0.1385196856786024
NLIDPDKNY	9	Unmodified	_NLIDPDKNY_					0	0	0			REV__nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4	REV__nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.2716674804688	2	546.272021	1090.52949	0.53485	0.00029217	-0.23872	-0.00013041	0.29612	0.00016176	546.7737297993075	31.293	0.29089	31.283	31.137	31.428	-0.010656					11	6	2	0	0	0	0.64555	1	1694	1694		44.377	5.1244	1	32217	+		38358	20236	25551	25563	43732	43732					-0.012154551446201367
NLIDPDKNY	9	Unmodified	_NLIDPDKNY_					0	0	0			REV__nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4	REV__nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	546.272021	1090.52949	-0.091364	-4.9909E-05	-0.24169	-0.00013203	-0.33305	-0.00018194	546.271186131666	31.361	0.30027	31.379	31.202	31.502	0.01836	0.048069	-2.0567E-06	NaN	44.377	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20236	+		38359	20236	25551	25563							-0.012154551446201367
NLIDPDKNY	9	Unmodified	_NLIDPDKNY_					0	0	0			REV__nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4	REV__nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	546.272021	1090.52949	0.53485	0.00029217	-0.23872	-0.00013041	0.29612	0.00016176	546.7737297993075	31.293	0.29089	31.283	31.137	31.428	-0.010656	-0.048069	1.1832E-06	NaN	44.377	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32217	+		38360	20236	25551	25563							-0.012154551446201367
NLILAVVAM	9	Unmodified	_NLILAVVAM_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;ENST00000480032.4_1_2:166152333-166226884:+|nuORF;chr2:165294135-165295773|17|10.53|0.48|4.44|+|ENST00000636769|SCN2A,SCN2A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000183873|Q14524-5|SCN5A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000136531|Q99250-2|SCN2A;ENSG00000136531|ENST00000375437|SCN2A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2883605957031	2	472.285889	942.557224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.33	1	116.3	115.8	116.8	-0.02433								0	0	0	0.32894	1	12880	12880		20.482	1.1219	1				38361	313;4699;8110;311;725;7570	25552	25564	43733	43733					0.08364776581913702
NLILIRYTG	9	Unmodified	_NLILIRYTG_					0	0	0		ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8170166015625	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.76255	1	8335	8335		35.618	6.4687	1	859730			38362	4399	25553	25565	43734	43734					0.09498308748311501
NLILIRYTG	9	Unmodified	_NLILIRYTG_					0	0	0		ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.81689453125	2	531.818941	1061.62333	-0.7527	-0.0004003	-3.1029	-0.0016502	-3.8556	-0.0020505	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.76255	1	8575	8575		35.618	0	1	2790600			38363	4399	25553	25565	43735	43735					0.09498308748311501
NLILIRYTG	9	Unmodified	_NLILIRYTG_					0	0	0		ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.76255	1	9035	9035		35.618	2.8059	1	4208000			38364	4399	25553	25565	43736	43736					0.09498308748311501
NLILIRYTG	9	Unmodified	_NLILIRYTG_					0	0	0		ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8177490234375	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.7932	1	8371	8371		23.042	1.0826	1	1422300			38365	4399	25553	25565	43737	43737					0.09498308748311501
NLILIRYTG	9	Unmodified	_NLILIRYTG_					0	0	0		ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.816650390625	2	531.818941	1061.62333	-0.04786	-2.5453E-05	-3.9998	-0.0021272	-4.0476	-0.0021526	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.58668	2	8890	8746;8890		47.657	1.618	1	4916300			38366	4399	25553	25565	43738;43739	43739					0.09498308748311501
NLILIRYTG	9	Unmodified	_NLILIRYTG_					0	0	0		ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8167114257812	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.78058	2	8555	8400;8555		30.504	6.3009	1	1159800			38367	4399	25553	25565	43740;43741	43741					0.09498308748311501
NLILIRYTG	9	Unmodified	_NLILIRYTG_					0	0	0		ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8167114257812	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.76255	1	8674	8674		35.618	1.4457	1	4022300			38368	4399	25553	25565	43742	43742					0.09498308748311501
NLILIRYTG	9	Unmodified	_NLILIRYTG_					0	0	0		ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.817138671875	2	531.818941	1061.62333	-0.69524	-0.00036974	-3.1977	-0.0017006	-3.8929	-0.0020703	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.55097	2	10232	10136;10232		49.442	1.7842	1	1296000			38369	4399	25553	25565	43743;43744	43744					0.09498308748311501
NLILIRYTG	9	Unmodified	_NLILIRYTG_					0	0	0		ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	ENSG00000139826|ENST00000375898|ABHD13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8165893554688	2	531.818941	1061.62333	-1.264	-0.00067223	-2.5284	-0.0013447	-3.7925	-0.0020169	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.55097	4	10512	10379;10391;10512;10608		49.442	15.269	1	4586300			38370	4399	25553	25565	43745;43746;43747;43748	43747					0.09498308748311501
NLILIVLD	8	Unmodified	_NLILIVLD_					0	0	0		ENST00000416465.5_1_22:31796666-31819296:+|nuORF;ENST00000433341.5_1_22:31795606-31819296:+|nuORF;ENSG00000185721|ENST00000331457|DRG1	ENST00000416465.5_1_22:31796666-31819296:+|nuORF	ENST00000416465.5_1_22:31796666-31819296:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30096435546875	2	456.791861	911.569169	0.0047775	2.1823E-06	2.6923	0.0012298	2.6971	0.001232	456.7929932525735	51.113	0.88086	51.121	50.884	51.765	0.0077477					35	23	2	0	0	0	0.4196	1	4409	4409		24.203	10.427	1	113290			38371	7736	25554	25566	43749	43749					0.10984716596738053
NLINGNLIRLA	11	Unmodified	_NLINGNLIRLA_					0	0	0			REV__ENSG00000133640|ENST00000393217|LRRIQ1	REV__ENSG00000133640|ENST00000393217|LRRIQ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.8695678710938	2	605.866954	1209.71936	0.79998	0.00048468	3.5168	0.0021307	4.3167	0.0026154	605.868964835272	50.651	0.82444	51.099	50.805	51.63	0.44761					51	19	4	0	0	0	0.70737	1	4993	4993		30.318	2.2362	1	1055400	+		38372	19087	25555	25567	43750	43750					0.12288456588430563
NLIRILPIN	9	Unmodified	_NLIRILPIN_					0	0	0		ENSG00000181544|ENST00000650831|FANCB	ENSG00000181544|ENST00000650831|FANCB	ENSG00000181544|ENST00000650831|FANCB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.3403930664062	2	533.342584	1064.67061	-1.5064	-0.00080343	-2.9287	-0.001562	-4.4351	-0.0023654	533.3409139496441	99.132	2.1048	99.317	98.763	100.87	0.18582					141	48	4	0	0	0	0.7932	1	10310	10310		23.042	1.0826	1	1837700			38373	7392	25556	25568	43751	43751					0.14086588019335977
NLISPVLL	8	Unmodified	_NLISPVLL_					0	0	0			REV__Tigger4b_dup2156|chr16:29442250-29442588:-|1.0027275721908493|0.4872832370944458|1.04|63.0|7|2|sense	REV__Tigger4b_dup2156|chr16:29442250-29442588:-|1.0027275721908493|0.4872832370944458|1.04|63.0|7|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801818847656	2	434.778754	867.542954	-0.61894	-0.0002691	3.8256	0.0016633	3.2067	0.0013942	434.7803762451805	34.577	0.94073	34.521	33.912	34.853	-0.056381					81	20	5	0	0	0	0.884	1	2151	2151		33.516	8.0654	1	3842800	+		38374	30335	25557	25569	43752	43752					0.10388447425293634
NLITHQKIHTR	11	Unmodified	_NLITHQKIHTR_					0	0	0		nc|ENSG00000147124|P51814-4|ZNF41;nc|ENSG00000147124|P51814-8|ZNF41;nc|ENSG00000147124|P51814-7|ZNF41;ENSG00000147124|ENST00000684689|ZNF41;nc|ENSG00000147124|P51814-2|ZNF41;nc|ENSG00000147124|P51814-3|ZNF41;nc|ENSG00000147124|P51814-5|ZNF41;nc|ENSG00000147124|P51814|ZNF41	nc|ENSG00000147124|P51814-4|ZNF41	nc|ENSG00000147124|P51814-4|ZNF41	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.188232421875	3	454.265115	1359.77352	0.72211	0.00032803	-0.71852	-0.0003264	0.0035892	1.6304E-06	454.2647402756052	24.924	0.94942	24.887	24.444	25.393	-0.037176					32	23	2	0	0	0	0.17365	1	983	983		21.032	0	1	37086			38375	4883	25558	25570	43753	43753					0.10802048739969905
NLITVLPI	8	Unmodified	_NLITVLPI_					0	0	0		ENSG00000173988|ENST00000595396|LRRC63	ENSG00000173988|ENST00000595396|LRRC63	ENSG00000173988|ENST00000595396|LRRC63	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7877502441406	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.87064	1	3506	3506		29.15	4.9468	1	539980			38376	6902	25559	25571	43754	43754					0.11308733942325944
NLIVLSQHL	9	Unmodified	_NLIVLSQHL_					0	0	0		ENST00000595984.5_1_19:19010755-19014100:-|nuORF;ENST00000598969.5_1_19:19010490-19016602:-|nuORF;nc|ENSG00000105669|O14579-3|COPE;nc|ENSG00000105669|O14579-2|COPE;ENSG00000105669|ENST00000262812|COPE	ENST00000595984.5_1_19:19010755-19014100:-|nuORF	ENST00000595984.5_1_19:19010755-19014100:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8104858398438	2	518.811116	1035.60768	1.4869	0.00077141	-3.1709	-0.0016451	-1.684	-0.00087369	518.8094559796755	98.41	1.4425	98.787	98.408	99.851	0.37679					96	35	4	0	0	0	0.58668	1	11948	11948		47.657	1.6851	1	12414000			38377	2237	25560	25572	43755	43755					0.09130022231283874
NLKERTHIIK	10	Unmodified	_NLKERTHIIK_					0	0	0			REV__nc|ENSG00000196172|Q96N22-2|ZNF681	REV__nc|ENSG00000196172|Q96N22-2|ZNF681	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3753662109375	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.825	1	55.815	55.315	56.315	-0.010136								0	0	0	0.45132	1	4991	4991		15.642	2.1878	1		+		38378	23099	25561	25573	43756	43756					0.13056145479754377
NLKFAGMH	8	Oxidation (M)	_NLKFAGM(Oxidation (M))H_		NLKFAGM(1)H		NLKFAGM(57)H	0	0	1			REV__ENSG00000043355|ENST00000376335|ZIC2	REV__ENSG00000043355|ENST00000376335|ZIC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.23455810546875	2	467.234187	932.453822	-1.3963	-0.0006524	-0.15861	-7.411E-05	-1.5549	-0.00072651	467.23387854623877	68.403	0.92169	68.403	68.094	69.016	0					94	38	3	0	0	0	0.89567	1	6064	6064		57.453	13.336	1	339590	+		38379	16336	25562	25574	43757	43757		235			-0.015107108058714402
NLKHIYKP	8	Unmodified	_NLKHIYKP_					0	0	0			REV__ENSG00000240720|ENST00000458448|LRRD1	REV__ENSG00000240720|ENST00000458448|LRRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.80145263671875	2	506.800552	1011.58655	0.035087	1.7782E-05	1.482	0.00075107	1.5171	0.00076886	506.80134407750546	51.852	1.4357	51.85	50.901	52.337	-0.0020447					55	33	2	0	0	0	0.87479	1	4451	4451		30.504	5.0535	1	101000	+		38380	23814	25563	25575	43758	43758					0.08122056922411502
NLKIHYMVSR	10	Unmodified	_NLKIHYMVSR_					0	0	0			REV__ENST00000281881.7_1_1:176905297-177133812:-|nuORF	REV__ENST00000281881.7_1_1:176905297-177133812:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.7581481933594	3	420.900897	1259.68086	0.95598	0.00040237	2.4372	0.0010258	3.3932	0.0014282	420.90185466392245	17.102	0.13924	16.62	16.532	16.672	-0.48256					4	2	2	0	0	0	0.37624	1	222	222		9.6461	0	1	19216	+		38381	20283	25564	25576	43759	43759					0.06140827682224881
NLKLALDAM	9	Unmodified	_NLKLALDAM_					0	0	0		nc|ENSG00000134215|Q9UKW4-2|VAV3;ENST00000343258.8_1_1:108115955-108328118:-|nuORF;ENSG00000134215|ENST00000370056|VAV3;nc|ENSG00000134215|Q9UKW4-4|VAV3	nc|ENSG00000134215|Q9UKW4-2|VAV3	nc|ENSG00000134215|Q9UKW4-2|VAV3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.780029296875	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.089	1	86.238	85.738	86.738	0.14902								0	0	0	0.28772	1	8452	8452		35.618	0	1				38382	3917	25565	25577	43760	43760					0.0480328471392113
NLKRNLEPIVK	11	Unmodified	_NLKRNLEPIVK_					0	0	0			REV__ENST00000432206.1_1_20:13373901-13374318:+|nuORF	REV__ENST00000432206.1_1_20:13373901-13374318:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.9399108886719	3	441.94175	1322.80342	-0.49593	-0.00021917	-3.6821	-0.0016273	-4.1781	-0.0018465	441.9399207304678	55.239	1.1399	55.213	54.702	55.842	-0.026581					95	31	4	0	0	0	0.75121	4	5090	4989;5010;5062;5090		21.78	5.2506	1	363460	+		38383	26630	25566	25578	43761;43762;43763;43764	43764					0.1549298768529752
NLKRNLEPIVK	11	Unmodified	_NLKRNLEPIVK_					0	0	0			REV__ENST00000432206.1_1_20:13373901-13374318:+|nuORF	REV__ENST00000432206.1_1_20:13373901-13374318:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.93914794921875	3	441.94175	1322.80342	-0.63553	-0.00028087	-3.7199	-0.001644	-4.3554	-0.0019248	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.76384	1	4629	4629		18.966	2.4365	1	409610	+		38384	26630	25566	25578	43765	43765					0.1549298768529752
NLKSHMKVHQ	10	Unmodified	_NLKSHMKVHQ_					0	0	0		nc|ENSG00000151612|Q17R98-2|ZNF827;ENSG00000151612|ENST00000508784|ZNF827;nc|ENSG00000151612|Q17R98-3|ZNF827;ENST00000508995.1_1_4:146791609-146813520:-|nuORF	nc|ENSG00000151612|Q17R98-2|ZNF827	nc|ENSG00000151612|Q17R98-2|ZNF827	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3297119140625	2	611.329682	1220.64481	1.1116	0.00067957	-1.8384	-0.0011239	-0.72676	-0.00044429	611.3286276945797	78.517	1.0448	78.644	78.256	79.301	0.12695					71	31	4	0	0	0	0.67571	1	7416	7416		45.972	0.95004	1	448710			38385	5129	25567	25579	43766	43766					0.04331370505406085
NLKSHMKVHQ	10	Unmodified	_NLKSHMKVHQ_					0	0	0		nc|ENSG00000151612|Q17R98-2|ZNF827;ENSG00000151612|ENST00000508784|ZNF827;nc|ENSG00000151612|Q17R98-3|ZNF827;ENST00000508995.1_1_4:146791609-146813520:-|nuORF	nc|ENSG00000151612|Q17R98-2|ZNF827	nc|ENSG00000151612|Q17R98-2|ZNF827	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3325805664062	2	611.329682	1220.64481	0.71049	0.00043435	-1.3764	-0.00084146	-0.66594	-0.00040711	611.3288931083291	78.39	0.975	78.526	78.284	79.259	0.13667					60	27	3	0	0	0	0.42393	2	7428	7428;7438		62.107	15.651	1	454390			38386	5129	25567	25579	43767;43768	43767					0.04331370505406085
NLKSHMKVHQ	10	Unmodified	_NLKSHMKVHQ_					0	0	0		nc|ENSG00000151612|Q17R98-2|ZNF827;ENSG00000151612|ENST00000508784|ZNF827;nc|ENSG00000151612|Q17R98-3|ZNF827;ENST00000508995.1_1_4:146791609-146813520:-|nuORF	nc|ENSG00000151612|Q17R98-2|ZNF827	nc|ENSG00000151612|Q17R98-2|ZNF827	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3297729492188	2	611.329682	1220.64481	-0.91836	-0.00056142	0.1285	7.8555E-05	-0.78986	-0.00048287	611.32977638209	78.511	1.062	78.605	78.288	79.35	0.0942					75	32	4	0	0	0	0.44803	1	7376	7376		60.118	18.692	1	422640			38387	5129	25567	25579	43769	43769					0.04331370505406085
NLKSRVQKQ	9	Unmodified	_NLKSRVQKQ_					0	0	0		nc|ENSG00000163554|P02549-2|SPTA1;ENSG00000163554|ENST00000643759|SPTA1	nc|ENSG00000163554|P02549-2|SPTA1	nc|ENSG00000163554|P02549-2|SPTA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.8320922851562	2	550.830372	1099.64619	-0.090392	-4.979E-05	3.6974	0.0020367	3.607	0.0019869	550.8322797616815	17.582	0.52146	17.1	16.851	17.373	-0.48256					29	11	4	0	0	0	0.21969	2	284	284;297		71.877	7.6702	1	579320			38388	5824	25568	25580	43770;43771	43770					0.1003532786580763
NLKSRVQKQ	9	Unmodified	_NLKSRVQKQ_					0	0	0		nc|ENSG00000163554|P02549-2|SPTA1;ENSG00000163554|ENST00000643759|SPTA1	nc|ENSG00000163554|P02549-2|SPTA1	nc|ENSG00000163554|P02549-2|SPTA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8321533203125	2	550.830372	1099.64619	0.14183	7.8122E-05	3.4819	0.0019179	3.6237	0.0019961	550.8321308312868	17.7	0.47925	17.079	16.875	17.355	-0.62141					34	12	4	0	0	0	0.21969	1	288	288		71.877	3.0313	1	821950			38389	5824	25568	25580	43772	43772					0.1003532786580763
NLKTLIHTQLS	11	Unmodified	_NLKTLIHTQLS_					0	0	0			REV__ENSG00000205108|ENST00000378788|FAM205A	REV__ENSG00000205108|ENST00000378788|FAM205A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3699951171875	2	634.372069	1266.72959	6.8434	0.0043413	1.2949	0.00082147	8.1384	0.0051628	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.75164	2	13787	13736;13787		21.686	4.2177	1	75725	+		38390	23541	25569	25581	43773;43774	43774					0.10689019522988019
NLKVQSGQTV	10	Unmodified	_NLKVQSGQTV_					0	0	0		nc|ENSG00000085563|P08183-2|ABCB1;ENSG00000085563|ENST00000622132|ABCB1;nc|ENSG00000005471|P21439-3|ABCB4;ENSG00000005471|ENST00000649586|ABCB4;nc|ENSG00000005471|P21439|ABCB4	nc|ENSG00000085563|P08183-2|ABCB1	nc|ENSG00000085563|P08183-2|ABCB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.2999877929688	2	537.301113	1072.58767	0.036797	1.9771E-05	-0.23053	-0.00012386	-0.19373	-0.00010409	537.3008851187805	50.122	0.82911	50.099	49.811	50.64	-0.02343					51	18	4	0	0	0	0.081562	1	4365	4365		104.01	15.837	1	1029800			38391	1534	25570	25582	43775	43775					0.054282265006804664
NLKYYVLPKK	10	Unmodified	_NLKYYVLPKK_					0	0	0		ENSG00000197299|ENST00000355112|BLM	ENSG00000197299|ENST00000355112|BLM	ENSG00000197299|ENST00000355112|BLM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3833618164062	2	633.384448	1264.75434	-0.79334	-0.00050249	2.0737	0.0013134	1.2803	0.00081094	633.3858115557084	49.904	1.4514	49.904	49.018	50.469	0					50	33	2	0	0	0	0.86621	1	3951	3951		14.865	0	1	147250			38392	8151	25571	25583	43776	43776					0.13255699396358978
NLLAMQQP	8	Unmodified	_NLLAMQQP_					0	0	0			REV__ENSG00000198786|ENST00000361567|MT-ND5	REV__ENSG00000198786|ENST00000361567|MT-ND5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2635803222656	2	457.741845	913.469137	0.009222	4.2213E-06	2.3335	0.0010681	2.3427	0.0010724	457.7437824860551	83.273	1.1583	83.729	82.694	83.852	0.45555					31	27	2	0	0	0	0.4196	1	9688	9688		17.365	0	1	131370	+		38393	23381	25572	25584	43777	43777					0.008941559913068886
NLLGPRSGN	9	Unmodified	_NLLGPRSGN_					0	0	0			REV__ENSG00000185008|ENST00000696593|ROBO2	REV__ENSG00000185008|ENST00000696593|ROBO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2537841796875	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.73802	1	8527	8527		37.812	4.9991	1	1673200	+		38394	22725	25573	25585	43778	43778					0.027191324691898444
NLLHVRIR	8	Unmodified	_NLLHVRIR_					0	0	0			REV__ENSG00000009335|ENST00000348165|UBE3C	REV__ENSG00000009335|ENST00000348165|UBE3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.82537841796875	2	510.824892	1019.63523	0.09199	4.6991E-05	0.078641	4.0172E-05	0.17063	8.7163E-05	510.8245577384575	17.892	0.38198	17.954	17.845	18.227	0.062601					40	20	3	0	0	0	0.85277	1	286	286		25.45	5.4534	1	248690	+		38395	16147	25574	25586	43779	43779					0.12619970282162285
NLLHVRIR	8	Unmodified	_NLLHVRIR_					0	0	0			REV__ENSG00000009335|ENST00000348165|UBE3C	REV__ENSG00000009335|ENST00000348165|UBE3C	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	510.824892	1019.63523	-0.48581	-0.00024816	0.68437	0.00034959	0.19856	0.00010143	510.825035540201	18.009	0.32497	18.053	17.932	18.257	0.044048	0.077844	0.0014025	NaN	25.45	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	294030	+		38396	16147	25574	25586							0.12619970282162285
NLLIVLLIL	9	Unmodified	_NLLIVLLIL_					0	0	0			REV__nc|ENSG00000180745|Q8NCR9-2|CLRN3	REV__nc|ENSG00000180745|Q8NCR9-2|CLRN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.360595703125	2	512.362453	1022.71035	-0.052808	-2.7057E-05	-2.2805	-0.0011684	-2.3333	-0.0011955	512.3611914628581	74.266	1.3455	74.309	74.086	75.431	0.0429					113	47	3	0	0	0	0.7932	1	7166	7166		13.775	5.544	1	281850	+		38397	22413	25575	25587	43780	43780					0.19990714970060708
NLLKAVTD	8	Unmodified	_NLLKAVTD_					0	0	0		nc|ENSG00000119231|Q96HI0-2|SENP5;ENSG00000119231|ENST00000323460|SENP5	nc|ENSG00000119231|Q96HI0-2|SENP5	nc|ENSG00000119231|Q96HI0-2|SENP5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.77227783203125	2	437.255643	872.496732	0.38065	0.00016644	-1.2712	-0.00055583	-0.89052	-0.00038938	437.2531406761409	26.265	0.065872	26.294	26.253	26.319	0.02817					4	2	2	0	0	0	0.4196	1	988	988		21.96	0	1	10356			38398	3058	25576	25588	43781	43781					0.055383825231729134
NLLKKTHLDVV	11	Unmodified	_NLLKKTHLDVV_					0	0	0		chr3:149063524-149068240|22|10.23|0.34|4.92|-|0|HLTF,HLTF|1	chr3:149063524-149068240|22|10.23|0.34|4.92|-|0|HLTF,HLTF|1	chr3:149063524-149068240|22|10.23|0.34|4.92|-|0|HLTF,HLTF|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.8941650390625	2	640.390262	1278.76597	0.58214	0.0003728	3.8031	0.0024355	4.3852	0.0028083	640.3927395119395	53.856	0.94003	53.879	53.327	54.267	0.022541					50	25	3	0	0	0	0.77061	1	4739	4739		17.468	1.8262	1	220800			38399	392	25577	25589	43782	43782					0.13773896419684206
NLLKLKPLYK	10	Unmodified	_NLLKLKPLYK_					0	0	0		ENST00000487196.1_1_10:5800911-5803598:+|nuORF	ENST00000487196.1_1_10:5800911-5803598:+|nuORF	ENST00000487196.1_1_10:5800911-5803598:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.4068603515625	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.987	1	58.066	57.566	58.566	0.079643								0	0	0	0.45132	1	4917	4917		19.997	2.5288	1				38400	12599	25578	25590	43783	43783					0.18548576293073893
NLLKVGGI	8	Unmodified	_NLLKVGGI_					0	0	0		nc|ENSG00000203880|Q9NV79-2|PCMTD2;ENSG00000203880|ENST00000308824|PCMTD2	nc|ENSG00000203880|Q9NV79-2|PCMTD2	nc|ENSG00000203880|Q9NV79-2|PCMTD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.74896240234375	2	407.263271	812.511988	1.198	0.00048789	2.5321	0.0010312	3.7301	0.0015191	407.264225803813	36.139	1.6231	36.149	35.705	37.328	0.0092812					84	35	3	0	0	0	0.4196	1	2380	2380		14.664	0	1	219020			38401	8400	25579	25591	43784	43784					0.09823294111038194
NLLLDELLF	9	Unmodified	_NLLLDELLF_					0	0	0			REV__ENSG00000067248|ENST00000251636|DHX29	REV__ENSG00000067248|ENST00000251636|DHX29	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3175659179688	2	545.313158	1088.61176	2.6012	0.0014185	4.1172	0.0022452	6.7184	0.0036636	545.3152041315631	102.23	0.80855	102.53	102.13	102.94	0.29864					51	18	4	0	0	0	0.7932	1	12441	12441		21.96	0.25755	1	936620	+		38402	16540	25580	25592	43785	43785					0.07100066934322058
NLLLEAVISTY	11	Unmodified	_NLLLEAVISTY_					0	0	0			REV__ENSG00000160882|ENST00000292427|CYP11B1	REV__ENSG00000160882|ENST00000292427|CYP11B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	618.3458251953125	2	618.347729	1234.6809	-1.2296	-0.00076029	-1.6997	-0.001051	-2.9293	-0.0018113	618.3465539597456	97.787	3.3462	97.982	96.915	100.26	0.19585					219	77	4	0	0	0	0.69248	1	10121	10121		32.751	2.4328	1	806570	+		38403	20746	25581	25593	43786	43786					0.07295106163246601
NLLLEEVI	8	Unmodified	_NLLLEEVI_					0	0	0			REV__ENSG00000186141|ENST00000334163|POLR3C	REV__ENSG00000186141|ENST00000334163|POLR3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.77899169921875	2	471.778951	941.543348	-0.65012	-0.00030671	0.67197	0.00031702	0.021851	1.0309E-05	471.77898452212014	81.892	1.4081	82.392	81.953	83.361	0.49967					75	34	4	0	0	0	0.83456	1	9485	9485		60.972	0	1	2439200	+		38404	22826	25582	25594	43787	43787					0.070238223544834
NLLLETLL	8	Unmodified	_NLLLETLL_					0	0	0		ENST00000504117.1_1_5:93752768-93812878:-|nuORF;nc|ENSG00000185261|Q8IV33-3|KIAA0825;nc|ENSG00000185261|Q8IV33|KIAA0825;ENSG00000185261|ENST00000682413|KIAA0825	ENST00000504117.1_1_5:93752768-93812878:-|nuORF	ENST00000504117.1_1_5:93752768-93812878:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7947692871094	2	464.789318	927.564084	-0.88537	-0.00041151	3.8254	0.001778	2.94	0.0013665	464.79098266785445	37.031	1.7451	36.978	35.836	37.581	-0.053558					86	38	3	0	0	0	0.92973	1	2527	2527		50.025	0	1	298640			38405	7695	25583	25595	43788	43788					0.09740412734140591
NLLLFLHR	8	Unmodified	_NLLLFLHR_					0	0	0		ENSG00000177570|ENST00000314727|SAMD12	ENSG00000177570|ENST00000314727|SAMD12	ENSG00000177570|ENST00000314727|SAMD12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3181762695312	2	513.316369	1024.61818	-0.40874	-0.00020981	1.1748	0.00060303	0.76602	0.00039321	513.3169683772445	55.191	1.5464	55.154	54.574	56.12	-0.036827					75	51	2	0	0	0	0.84341	1	4609	4609		24.203	1.1603	1	226240			38406	7148	25584	25596	43789	43789					0.10686049676360199
NLLLFSGRPM	10	Unmodified	_NLLLFSGRPM_					0	0	0			REV__ENSG00000171094|ENST00000389048|ALK	REV__ENSG00000171094|ENST00000389048|ALK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3193969726562	2	574.318251	1146.62195	0.81882	0.00047026	1.348	0.00077417	2.1668	0.0012444	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.82886	1	9725	9725		37.812	3.8899	1	1866200	+		38407	21709	25585	25597	43790	43790					0.05450351387912633
NLLLLGVL	8	Unmodified	_NLLLLGVL_					0	0	0		ENSG00000273238|ENST00000610212|TMEM271	ENSG00000273238|ENST00000610212|TMEM271	ENSG00000273238|ENST00000610212|TMEM271	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	427.302734375	2	427.789121	853.56369	-1.169	-0.00050008	1.8053	0.00077229	0.63631	0.00027221	427.79017757603225	68.769	0.19891	68.835	68.695	68.894	0.065506					10	7	2	0	0	0	0.4196	1	6169	6169		19.36	0	1	23676			38408	8986	25586	25598	43791	43791					0.13105037804950825
NLLQGKWLTY	10	Unmodified	_NLLQGKWLTY_					0	0	0			REV__nc|ENSG00000163946|Q9UK61-3|TASOR	REV__nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.3458251953125	2	618.342781	1234.67101	0.89263	0.00055195	4.1677	0.002577	5.0603	0.003129	618.3452359789501	97.829	3.1632	97.989	96.92	100.08	0.16073					214	73	4	0	0	0	0.67571	1	10228	10228		45.972	9.5255	1	874220	+		38409	21001	25587	25599	43792	43792					0.06305962948522392
NLLQGKWLTY	10	Unmodified	_NLLQGKWLTY_					0	0	0			REV__nc|ENSG00000163946|Q9UK61-3|TASOR	REV__nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	618.3464965820312	2	618.342781	1234.67101	1.8217	0.0011265	3.4255	0.0021182	5.2473	0.0032446	618.3447943757376	97.603	2.4577	97.988	96.782	99.24	0.38548					159	59	3	0	0	0	0.86718	1	11724	11724		27.882	3.3631	1	976090	+		38410	21001	25587	25599	43793	43793					0.06305962948522392
NLLSLLKK	8	Unmodified	_NLLSLLKK_					0	0	0			REV__nc|ENSG00000130167|Q9UKR8-3|TSPAN16	REV__nc|ENSG00000130167|Q9UKR8-3|TSPAN16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.8085021972656	2	464.813128	927.611703	-0.0085672	-3.9822E-06	0.0038038	1.768E-06	-0.0047635	-2.2141E-06	464.812967373292	36.951	1.2338	36.927	36.503	37.737	-0.023979					51	27	3	0	0	0	0.58928	1	2411	2411		71.877	0.58177	1	390210	+		38411	18853	25588	25600	43794	43794					0.1450011172498762
NLLSSRHT	8	Unmodified	_NLLSSRHT_					0	0	0			REV__ENSG00000080298|ENST00000617270|RFX3	REV__ENSG00000080298|ENST00000617270|RFX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.25384521484375	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.89494	1	8657	8657		37.159	0.71236	1	1578600	+		38412	16800	25589	25601	43795	43795					0.027191324691784757
NLLSSRHT	8	Unmodified	_NLLSSRHT_					0	0	0			REV__ENSG00000080298|ENST00000617270|RFX3	REV__ENSG00000080298|ENST00000617270|RFX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2537841796875	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.88601	1	8099	8099		34.173	0	1	1603800	+		38413	16800	25589	25601	43796	43796					0.027191324691784757
NLLSSRHT	8	Unmodified	_NLLSSRHT_					0	0	0			REV__ENSG00000080298|ENST00000617270|RFX3	REV__ENSG00000080298|ENST00000617270|RFX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2540283203125	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.90983	1	9914	9914		42.396	1.618	1	1215000	+		38414	16800	25589	25601	43797	43797					0.027191324691784757
NLLTSLVRRLR	11	Unmodified	_NLLTSLVRRLR_					0	0	0			REV__ENST00000520367.5_2_17:78402403-78410038:+|nuORF	REV__ENST00000520367.5_2_17:78402403-78410038:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2731018066406	3	447.62101	1339.8412	-1.2855	-0.00057542	2.3165	0.0010369	1.031	0.0004615	447.6228380882362	106.82	0.52354	106.97	106.65	107.17	0.14843					17	12	2	0	0	0	0.17807	1	11479	11479		6.712	0	1	118790	+		38415	28101	25590	25602	43798	43798					0.18487498670788227
NLLTVQLKQPR	11	Unmodified	_NLLTVQLKQPR_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;ENST00000493587.1_1_8:100883622-100887891:+|nuORF	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2672424316406	3	437.269866	1308.78777	-1.7231	-0.00075344	-2.8954	-0.0012661	-4.6185	-0.0020195	437.26850375985913	50.916	1.5264	50.916	50.06	51.586	0					171	39	5	0	0	0	0.71803	1	4022	4022		28.577	6.0151	1	3001200			38416	3805	25591	25603	43799	43799					0.14572701168253843
NLLTVQLKQPR	11	Unmodified	_NLLTVQLKQPR_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;ENST00000493587.1_1_8:100883622-100887891:+|nuORF	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2680358886719	3	437.269866	1308.78777	-1.7045	-0.00074531	-2.8139	-0.0012304	-4.5184	-0.0019757	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.7896	1	4229	4229		13.508	0	1	3449100			38417	3805	25591	25603	43800	43800					0.14572701168253843
NLLTVQLKQPR	11	Unmodified	_NLLTVQLKQPR_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;ENST00000493587.1_1_8:100883622-100887891:+|nuORF	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2677917480469	3	437.269866	1308.78777	-1.6775	-0.00073351	-2.9878	-0.0013065	-4.6653	-0.00204	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.72374	1	4515	4515		27.644	5.0823	1	2305800			38418	3805	25591	25603	43801	43801					0.14572701168253843
NLLTVQLKQPR	11	Unmodified	_NLLTVQLKQPR_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;ENST00000493587.1_1_8:100883622-100887891:+|nuORF	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677917480469	3	437.269866	1308.78777	-0.071191	-3.113E-05	-4.4555	-0.0019482	-4.5267	-0.0019794	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.75121	1	4423	4423		21.78	3.2494	1	3270700			38419	3805	25591	25603	43802	43802					0.14572701168253843
NLLTVQLKQPR	11	Unmodified	_NLLTVQLKQPR_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;ENST00000493587.1_1_8:100883622-100887891:+|nuORF	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2677307128906	3	437.269866	1308.78777	-0.68964	-0.00030156	-4.0468	-0.0017696	-4.7365	-0.0020711	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.77205	2	4744	4744;4809		17.167	1.2461	1	2651700			38420	3805	25591	25603	43803;43804	43803					0.14572701168253843
NLLTVQLKQPR	11	Unmodified	_NLLTVQLKQPR_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;ENST00000493587.1_1_8:100883622-100887891:+|nuORF	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26776123046875	3	437.269866	1308.78777	-0.59734	-0.0002612	-4.1797	-0.0018276	-4.777	-0.0020888	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.74405	1	4421	4421		23.378	4.8469	1	2564600			38421	3805	25591	25603	43805	43805					0.14572701168253843
NLLVILLPDAN	11	Unmodified	_NLLVILLPDAN_					0	0	0		nc|ENSG00000146376|Q8N392-2|ARHGAP18;ENSG00000146376|ENST00000368149|ARHGAP18	nc|ENSG00000146376|Q8N392-2|ARHGAP18	nc|ENSG00000146376|Q8N392-2|ARHGAP18	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8556518554688	2	597.858264	1193.70197	-0.35529	-0.00021242	-2.6795	-0.001602	-3.0348	-0.0018144	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.61369	1	9220	9220		42.864	1.4377	1	1224100			38422	4838	25592	25604	43806	43806					0.11287116262769814
NLLVLKAEH	9	Unmodified	_NLLVLKAEH_					0	0	0			REV__nc|ENSG00000140199|Q9UHW9-6|SLC12A6	REV__nc|ENSG00000140199|Q9UHW9-6|SLC12A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.810791015625	2	518.811116	1035.60768	2.0617	0.0010696	-3.6499	-0.0018936	-1.5882	-0.00082399	518.8091991124401	100.03	1.7649	100.37	99.779	101.54	0.34591					151	44	5	0	0	0	0.58668	1	12162	12162		47.657	1.7054	1	18229000	+		38423	19600	25593	25605	43807	43807					0.09130022231261137
NLLVSPSL	8	Unmodified	_NLLVSPSL_					0	0	0		ENST00000294507.3_1_1:31206483-31206588:-|nuORF	ENST00000294507.3_1_1:31206483-31206588:-|nuORF	ENST00000294507.3_1_1:31206483-31206588:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.7513122558594	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.91977	1	7153	7153		45.952	3.4775	1	423780			38424	9705	25594	25606	43808	43808					0.06383284011531032
NLLYDVLS	8	Unmodified	_NLLYDVLS_					0	0	0			REV__ENSG00000214654|ENST00000689072|B3GALT9	REV__ENSG00000214654|ENST00000689072|B3GALT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.7526550292969	2	468.755475	935.496398	-0.11471	-5.3772E-05	-2.4782	-0.0011616	-2.5929	-0.0012154	468.75412070279606	21.769	0.39813	21.712	21.542	21.94	-0.057203					25	14	2	0	0	0	0.91005	1	637	637		42.474	0	1	61732	+		38425	23658	25595	25607	43809	43809					0.026069628033383196
NLMGLTLNIDG	11	Unmodified	_NLMGLTLNIDG_					0	0	0			REV__ENSG00000171495|ENST00000399564|MROH2B	REV__ENSG00000171495|ENST00000399564|MROH2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.8591918945312	2	580.802631	1159.59071	-1.5693	-0.00091146	0.9816	0.00057011	-0.58771	-0.00034134	581.3038939247546	74.316	0.20534	74.707	74.623	74.829	0.3911					6	4	2	0	0	0	0.17339	1	8365	8365		46.457	24.771	1	51336	+		38426	21738	25596	25608	43810	43810					0.017297335631610622
NLMNVSNAR	9	Unmodified	_NLMNVSNAR_					0	0	0		nc|ENSG00000290988|Q8N8C0-2|ZNF781;nc|ENSG00000290988|Q8N8C0|ZNF781	nc|ENSG00000290988|Q8N8C0-2|ZNF781	nc|ENSG00000290988|Q8N8C0-2|ZNF781	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8035888671875	2	509.758558	1017.50256	-0.38081	-0.00019412	3.1169	0.0015889	2.7361	0.0013947	509.7600249380089	87.911	0.68789	88.375	88.102	88.79	0.46312					27	16	2	0	0	0	0.20789	1	10337	10337		25.574	3.6142	1	186970			38427	15344	25597	25609	43811	43811					-0.005488422367875501
NLNKFDEG	8	Unmodified	_NLNKFDEG_					0	0	0		ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR;nc|ENSG00000001626|P13569-3|CFTR	ENSG00000001626|ENST00000003084|CFTR	ENSG00000001626|ENST00000003084|CFTR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72320556640625	2	468.724707	935.43486	-0.013184	-6.1798E-06	-3.3225	-0.0015574	-3.3357	-0.0015635	468.7232380662735	77.148	2.5429	77.547	77.268	79.811	0.3997					145	61	5	0	0	0	0.9283	1	8747	8747		49.442	1.5259	1	15095000			38428	650	25598	25610	43812	43812					-0.03543968895939997
NLNVFSVR	8	Unmodified	_NLNVFSVR_					0	0	0			REV__nc|ENSG00000140153|Q8TBZ3-8|WDR20	REV__nc|ENSG00000140153|Q8TBZ3-8|WDR20	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	474.43060302734375	2	474.766709	947.518865	-1.0035	-0.00047643	3.6956	0.0017545	2.6921	0.0012781	474.76832823733764	28.811	0.12061	28.88	28.807	28.928	0.06868					6	5	2	0	0	0	0.4196	1	1202	1202		20.947	5.3051	1	18836	+		38429	19599	25599	25611	43813	43813					0.04300606991625955
NLPAPGLRIRG	11	Unmodified	_NLPAPGLRIRG_					0	0	0			REV__ENSG00000169021|ENST00000304863|UQCRFS1	REV__ENSG00000169021|ENST00000304863|UQCRFS1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3513793945312	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.73	1	112.7	112.2	113.2	-0.025002								0	0	0	0.56276	1	12462	12462		19.104	0	1		+		38430	21542	25600	25612	43814	43814					0.1186360713677459
NLPIKKWP	8	Unmodified	_NLPIKKWP_					0	0	0			REV__nc|ENSG00000135913|Q86T82-2|USP37	REV__nc|ENSG00000135913|Q86T82-2|USP37	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.3030090332031	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.531	1	51.446	50.946	51.946	-0.084538								0	0	0	0.30125	1	4114	4114		20.482	1.1219	1		+		38431	19266	25601	25613	43815	43815					0.09887244927790562
NLPKITLYV	9	Unmodified	_NLPKITLYV_					0	0	0			REV__nc|ENSG00000203965|A8K855-2|EFCAB7	REV__nc|ENSG00000203965|A8K855-2|EFCAB7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.82080078125	2	530.823692	1059.63283	-0.07706	-4.0905E-05	-3.7072	-0.0019679	-3.7842	-0.0020088	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.78983	1	7617	7617		27.882	2.3082	1	1032800	+		38432	23449	25602	25614	43816	43816					0.10540077033851958
NLPKPRSVT	9	Unmodified	_NLPKPRSVT_					0	0	0		ENST00000481797.5_1_1:153713821-153719448:+|nuORF	ENST00000481797.5_1_1:153713821-153719448:+|nuORF	ENST00000481797.5_1_1:153713821-153719448:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3006896972656	2	506.300916	1010.58728	-0.77581	-0.00039279	0.85671	0.00043375	0.080901	4.096E-05	506.3012917024536	96.808	1.2917	96.808	96.218	97.509	0					69	29	3	0	0	0	0.69624	1	9649	9649		40.778	7.9657	1	235960			38433	12468	25603	25615	43817	43817					0.08240851571486019
NLPNISRIYV	10	Unmodified	_NLPNISRIYV_					0	0	0		nc|ENSG00000165409|P16473-2|TSHR;nc|ENSG00000165409|P16473-3|TSHR;nc|ENSG00000165409|P16473|TSHR;ENSG00000165409|ENST00000298171|TSHR	nc|ENSG00000165409|P16473-2|TSHR	nc|ENSG00000165409|P16473-2|TSHR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	594.8388061523438	2	594.840405	1187.66626	-1.8463	-0.0010983	-2.1096	-0.0012549	-3.9559	-0.0023531	594.8391183402547	69.554	0.6607	69.59	69.382	70.042	0.035614					50	33	2	0	0	0	0.80179	1	6652	6652		39.253	6.5023	1	1808800			38434	6080	25604	25616	43818	43818					0.07993078805748155
NLPRCGAL	8	Unmodified	_NLPRCGAL_					0	0	0		ENSG00000137269|ENST00000370888|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.22857666015625	2	422.228905	842.443257	-0.093209	-3.9356E-05	-2.3901	-0.0010092	-2.4833	-0.0010485	422.22779141825134	61.484	1.5469	62.037	61.445	62.992	0.55386					58	39	2	0	0	0	0.85277	1	6599	6599		25.45	0	1	212920			38435	4185	25605	25617	43819	43819					0.01573306539683017
NLPRRKGKGVL	11	Unmodified	_NLPRRKGKGVL_					0	0	0			REV__nc|ENSG00000183765|O96017-5|CHEK2	REV__nc|ENSG00000183765|O96017-5|CHEK2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2666931152344	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.791	1	64.915	64.415	65.415	0.12397								0	0	0	0.56276	1	5736	5736		13.508	0.55046	1		+		38436	22624	25606	25618	43820	43820					0.16895557953557727
NLPSLELLI	9	Unmodified	_NLPSLELLI_					0	0	0		ENSG00000259224|ENST00000412468|SLC35G6;ENSG00000164729|ENST00000297307|SLC35G3;ENSG00000177710|ENST00000382435|SLC35G5	ENSG00000259224|ENST00000412468|SLC35G6	ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30694580078125	2	506.307875	1010.6012	0.36813	0.00018639	1.8165	0.00091972	2.1847	0.0011061	506.3087401275949	51.82	1.4912	51.879	51.289	52.78	0.059719					73	45	2	0	0	0	0.78058	1	4253	4253		30.504	2.6214	1	160650			38437	5995	25607	25619	43821	43821					0.09632084279917308
NLPWSLGGKTQ	11	Unmodified	_NLPWSLGGKTQ_					0	0	0		nc|ENSG00000130783|Q6P9F0-3|CCDC62;nc|ENSG00000130783|Q6P9F0-2|CCDC62;ENSG00000130783|ENST00000253079|CCDC62	nc|ENSG00000130783|Q6P9F0-3|CCDC62	nc|ENSG00000130783|Q6P9F0-3|CCDC62	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8241577148438	2	600.822212	1199.62987	-0.59314	-0.00035637	4.4207	0.002656	3.8275	0.0022997	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.69248	1	6850	6850		32.751	2.4328	1	825510			38438	3685	25608	25620	43822	43822					0.03804201909065341
NLQGVSAASS	10	Unmodified	_NLQGVSAASS_					0	0	0		nc|ENSG00000110171|O75382-4|TRIM3;nc|ENSG00000110171|O75382-3|TRIM3;nc|ENSG00000110171|O75382-2|TRIM3;ENSG00000110171|ENST00000345851|TRIM3	nc|ENSG00000110171|O75382-4|TRIM3	nc|ENSG00000110171|O75382-4|TRIM3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.28167724609375	2	467.235439	932.456324	0.44765	0.00020916	-1.2484	-0.00058328	-0.80072	-0.00037412	467.2343425850781	21.296	1.1114	20.853	20.517	21.628	-0.44324					34	25	2	0	0	0	0.37624	1	770	770		25.574	3.8717	1	135540			38439	2514	25609	25621	43823	43823					-0.012605838672357095
NLQIRETSL	9	Unmodified	_NLQIRETSL_					0	0	0		ENSG00000131095|ENST00000588735|GFAP	ENSG00000131095|ENST00000588735|GFAP	ENSG00000131095|ENST00000588735|GFAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	537.3007202148438	2	537.301113	1072.58767	0.0029858	1.6043E-06	-0.072329	-3.8863E-05	-0.069343	-3.7258E-05	537.3009451453933	50.198	0.77192	50.195	49.838	50.609	-0.0030365					47	18	3	0	0	0	2.0213E-05	4	4246	4217;4224;4235;4246		154.12	37.215	1	962930			38440	3715	25610	25622	43824;43825;43826;43827	43827					0.054282265006804664
NLQIRETSL	9	Unmodified	_NLQIRETSL_					0	0	0		ENSG00000131095|ENST00000588735|GFAP	ENSG00000131095|ENST00000588735|GFAP	ENSG00000131095|ENST00000588735|GFAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.3004760742188	2	537.301113	1072.58767	0.036797	1.9771E-05	-0.23053	-0.00012386	-0.19373	-0.00010409	537.3008851187805	50.122	0.82911	50.099	49.811	50.64	-0.02343					51	18	4	0	0	0	0.010555	4	4328	4316;4328;4340;4352		132.76	28.011	1	1029800			38441	3715	25610	25622	43828;43829;43830;43831	43829					0.054282265006804664
NLQIRETSL	9	Unmodified	_NLQIRETSL_					0	0	0		ENSG00000131095|ENST00000588735|GFAP	ENSG00000131095|ENST00000588735|GFAP	ENSG00000131095|ENST00000588735|GFAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.3006591796875	2	537.301113	1072.58767	0.35186	0.00018905	-0.4096	-0.00022008	-0.057736	-3.1022E-05	537.3007589479149	50.199	0.83301	50.202	49.855	50.688	0.0035973					51	18	4	0	0	0	0.0062975	3	4282	4259;4282;4294		136.27	45.491	1	980940			38442	3715	25610	25622	43832;43833;43834	43833					0.054282265006804664
NLQKKKVSS	9	Unmodified	_NLQKKKVSS_					0	0	0		ENST00000256544.7_2_15:34434362-34434515:-|nuORF	ENST00000256544.7_2_15:34434362-34434515:-|nuORF	ENST00000256544.7_2_15:34434362-34434515:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3136596679688	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.76255	1	12549	12549		35.618	2.1027	1	4038100			38443	9341	25611	25623	43835	43835					0.0994112074295117
NLQLELLK	8	Unmodified	_NLQLELLK_					0	0	0			REV__ENST00000566243.5_2_15:74969356-74988325:-|nuORF	REV__ENST00000566243.5_2_15:74969356-74988325:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.79986572265625	2	485.800217	969.585882	-0.76305	-0.00037069	0.65085	0.00031618	-0.1122	-5.4507E-05	485.8004603855518	46.55	0.69697	47.021	46.735	47.432	0.47139					27	16	3	0	0	0	0.93685	1	4383	4383		52.937	5.2794	1	1501100	+		38444	28866	25612	25624	43836	43836					0.09987217482716915
NLQLIQSIR	9	Unmodified	_NLQLIQSIR_					0	0	0		ENST00000565396.5_1_16:2048609-2048846:-|nuORF;ENST00000567008.1_1_16:2048235-2049192:-|nuORF;nc|ENSG00000167962|Q86UK7-2|ZNF598;nc|ENSG00000167962|Q86UK7-3|ZNF598;nc|ENSG00000167962|Q86UK7|ZNF598;ENSG00000167962|ENST00000562103|ZNF598	ENST00000565396.5_1_16:2048609-2048846:-|nuORF	ENST00000565396.5_1_16:2048609-2048846:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.8257446289062	2	542.827298	1083.64004	-0.026858	-1.4579E-05	-2.0696	-0.0011235	-2.0965	-0.001138	542.8258921648546	16.655	0.52182	16.168	16.006	16.528	-0.48718					20	11	3	0	0	0	0.35373	1	162	162		60.972	9.6365	1	378160			38445	6343	25613	25625	43837	43837					0.10156809634258934
NLQLKDPT	8	Unmodified	_NLQLKDPT_					0	0	0		nc|ENSG00000138161|Q86UP6-2|CUZD1;ENSG00000138161|ENST00000392790|CUZD1	nc|ENSG00000138161|Q86UP6-2|CUZD1	nc|ENSG00000138161|Q86UP6-2|CUZD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.7586669921875	2	464.758549	927.502546	0.23835	0.00011077	-0.44626	-0.0002074	-0.20791	-9.6628E-05	464.7583607779337	33.68	0.79133	33.849	33.568	34.36	0.16971					52	18	4	0	0	0	0.83456	1	2439	2439		60.972	0	1	1274300			38446	4277	25614	25626	43838	43838					0.03589481034839537
NLQPFYFY	8	Unmodified	_NLQPFYFY_					0	0	0		nc|ENSG00000080839|P28749-2|RBL1;ENSG00000080839|ENST00000373664|RBL1	nc|ENSG00000080839|P28749-2|RBL1	nc|ENSG00000080839|P28749-2|RBL1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2606201171875	2	546.263468	1090.51238	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.398	1	59.951	59.451	60.451	0.55323								0	0	0	0.21389	1	6274	6274		60.294	0	1				38447	1453	25615	25627	43839	43839					-0.029253309597606858
NLQRQVKP	8	Unmodified	_NLQRQVKP_					0	0	0		nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;ENSG00000065534|ENST00000360304|MYLK;ENST00000504946.5_1_3:123400948-123419770:-|nuORF;nc|ENSG00000065534|Q15746-11|MYLK;nc|ENSG00000065534|Q15746-7|MYLK	nc|ENSG00000065534|Q15746-4|MYLK	nc|ENSG00000065534|Q15746-4|MYLK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.2982482910156	2	491.793258	981.571963	0.42504	0.00020903	4.4189	0.0021732	4.8439	0.0023822	491.7954861357076	59.345	2.1315	59.459	58.989	61.12	0.11396					113	74	3	0	0	0	0.85277	1	5075	5075		25.45	1.2474	1	139720			38448	1133	25616	25628	43840	43840					0.08043984774280943
NLQTYIDKS	9	Unmodified	_NLQTYIDKS_					0	0	0		ENSG00000119965|ENST00000481909|C10orf88	ENSG00000119965|ENST00000481909|C10orf88	ENSG00000119965|ENST00000481909|C10orf88	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.2803344726562	2	541.279846	1080.54514	0.55726	0.00030164	-0.34741	-0.00018805	0.20985	0.00011359	541.2795693403968	25.699	0.42077	25.658	25.436	25.856	-0.04117					16	10	2	0	0	0	0.75725	1	1119	1119		36.447	4.8125	1	29878			38449	3105	25617	25629	43841	43841					0.008088313724329055
NLQTYIDKS	9	Unmodified	_NLQTYIDKS_					0	0	0		ENSG00000119965|ENST00000481909|C10orf88	ENSG00000119965|ENST00000481909|C10orf88	ENSG00000119965|ENST00000481909|C10orf88	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	541.279846	1080.54514	0.45442	0.00024597	-0.043646	-2.3625E-05	0.41077	0.00022234	541.2799067061106	25.523	0.32604	25.574	25.368	25.694	0.050451	-0.048063	0.00026019	NaN	36.447	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25820			38450	3105	25617	25629							0.008088313724329055
NLQTYIDKS	9	Unmodified	_NLQTYIDKS_					0	0	0		ENSG00000119965|ENST00000481909|C10orf88	ENSG00000119965|ENST00000481909|C10orf88	ENSG00000119965|ENST00000481909|C10orf88	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	541.279846	1080.54514	0.87051	0.00047119	-0.44403	-0.00024034	0.42649	0.00023085	541.2795073058332	25.666	0.42307	25.633	25.419	25.842	-0.032125	0.011783	-0.00017324	NaN	36.447	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33125			38451	3105	25617	25629							0.008088313724329055
NLQVSLLAVDE	11	Unmodified	_NLQVSLLAVDE_					0	0	0		ENST00000524877.5_1_11:61726936-61727579:+|nuORF;nc|ENSG00000127325|Q8N1M1-1|BEST3;nc|ENSG00000127325|Q8N1M1-5|BEST3;nc|ENSG00000127325|Q8N1M1-6|BEST3;ENSG00000167995|ENST00000378043|BEST1;nc|ENSG00000167995|O76090-3|BEST1;ENSG00000127325|ENST00000330891|BEST3	ENST00000524877.5_1_11:61726936-61727579:+|nuORF	ENST00000524877.5_1_11:61726936-61727579:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.823974609375	2	600.82716	1199.63977	-0.59313	-0.00035637	-3.8147	-0.002292	-4.4078	-0.0026483	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.6493	1	6880	6880		38.754	5.9412	1	825510			38452	3490	25618	25630	43842	43842					0.04793345123766812
NLRAHAES	8	Unmodified	_NLRAHAES_					0	0	0			REV__ENSG00000178460|ENST00000422365|MCMDC2	REV__ENSG00000178460|ENST00000422365|MCMDC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	449.233154296875	2	449.230491	896.446428	-1.2481	-0.0005607	1.5085	0.00067767	0.26038	0.00011697	449.23112787491493	83.63	3.2349	83.63	82.037	85.271	0					120	78	2	0	0	0	0.884	1	7853	7853		33.516	3.0119	1	126580	+		38453	22280	25619	25631	43843	43843					-0.0059372708195724044
NLRHIGLF	8	Unmodified	_NLRHIGLF_					0	0	0			REV__ENSG00000166535|ENST00000299698|A2ML1	REV__ENSG00000166535|ENST00000299698|A2ML1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.285888671875	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.415	1	76.463	75.963	76.963	0.047981								0	0	0	0.29353	1	7468	7468		28.254	0.37203	1		+		38454	21302	25620	25632	43844	43844					0.07004903608174118
NLRHIGLF	8	Unmodified	_NLRHIGLF_					0	0	0			REV__ENSG00000166535|ENST00000299698|A2ML1	REV__ENSG00000166535|ENST00000299698|A2ML1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.28448486328125	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.633	1	57.03	56.53	57.53	0.39672								0	0	0	0.30609	1	5853	5853		44.531	2.1349	1		+		38455	21302	25620	25632	43845	43845					0.07004903608174118
NLRLPPPG	8	Unmodified	_NLRLPPPG_					0	0	0		ENST00000588024.1_1_19:10603273-10610184:-|nuORF	ENST00000588024.1_1_19:10603273-10610184:-|nuORF	ENST00000588024.1_1_19:10603273-10610184:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.25689697265625	2	432.25852	862.502486	0.095672	4.1355E-05	-1.4893	-0.00064377	-1.3936	-0.00060241	432.25767954187023	68.33	1.4604	68.877	68.284	69.744	0.54722					66	34	3	0	0	0	0.86288	1	7499	7499		26.796	0	1	472160			38456	14205	25621	25633	43846	43846					0.06573525825513116
NLRNEQRLR	9	Unmodified	_NLRNEQRLR_					0	0	0			REV__AluSx_dup91179|chr16:18786126-18786367:+|9.316423791494064|0.0045621159872568|11.0|63.0|2|1|sense	REV__AluSx_dup91179|chr16:18786126-18786367:+|9.316423791494064|0.0045621159872568|11.0|63.0|2|1|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	600.6516723632812	2	599.841802	1197.66905	0.26219	0.00015727	3.584	0.0021499	3.8462	0.0023071	600.3447311865283	30.035	0.11934	30.147	30.086	30.206	0.11225					6	5	2	0	0	0	0.20789	1	1314	1314		23.042	0	1	38430	+		38457	15385	25622	25634	43847	43847					0.0781234698326898
NLRQLQVLIL	10	Unmodified	_NLRQLQVLIL_					0	0	0		ENSG00000172061|ENST00000347624|LRRC15;nc|ENSG00000172061|Q8TF66-2|LRRC15	ENSG00000172061|ENST00000347624|LRRC15	ENSG00000172061|ENST00000347624|LRRC15	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9294738769531	3	403.92744	1208.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.406	1	48.405	47.905	48.905	-0.0010834								0	0	0	0.45132	1	4026	4026		21.686	0.65352	1				38458	6738	25623	25635	43848	43848					0.16446217627890292
NLRRFRRSWYF	11	Unmodified	_NLRRFRRSWYF_					0	0	0		ENST00000369063.7_1_6:107040122-107067091:-|nuORF	ENST00000369063.7_1_6:107040122-107067091:-|nuORF	ENST00000369063.7_1_6:107040122-107067091:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.290283203125	3	534.291776	1599.8535	0.32514	0.00017372	-4.1773	-0.0022319	-3.8522	-0.0020582	534.2895008039583	33.083	0.979	33.029	32.72	33.699	-0.05434					55	23	3	0	0	0	0.80813	1	1987	1987		9.6461	0.43434	1	281820			38459	10611	25624	25636	43849	43849					0.07756535133830766
NLRRNRPLL	9	Unmodified	_NLRRNRPLL_					0	0	0		ENST00000490957.5_1_7:11013950-11101713:+|nuORF;nc|ENSG00000106443|O94880-1|PHF14;ENSG00000106443|ENST00000634607|PHF14	ENST00000490957.5_1_7:11013950-11101713:+|nuORF	ENST00000490957.5_1_7:11013950-11101713:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.1854858398438	2	576.359631	1150.70471	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.869	1	22.957	22.457	23.457	0.088013								0	0	0	0.30053	1	710	710		30.504	9.5567	1				38460	2296	25625	25637	43850	43850					0.13538429230948168
NLRTSIKLS	9	Unmodified	_NLRTSIKLS_					0	0	0			REV__nc|ENSG00000165115|Q86VH2-3|KIF27	REV__nc|ENSG00000165115|Q86VH2-3|KIF27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3135375976562	2	516.314023	1030.61349	-0.047037	-2.4286E-05	0.46194	0.00023851	0.4149	0.00021422	516.3142012916925	102.4	1.3625	102.42	101.73	103.09	0.01989					76	32	3	0	0	0	0.77244	1	10965	10965		32.812	1.2826	1	772400	+		38461	21148	25626	25638	43851	43851					0.09941120742928433
NLRVEPIVP	9	Unmodified	_NLRVEPIVP_					0	0	0			REV__ENSG00000133958|ENST00000695012|UNC79	REV__ENSG00000133958|ENST00000695012|UNC79	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8098754882812	2	518.811116	1035.60768	1.4633	0.00075919	-2.8003	-0.0014528	-1.337	-0.00069364	518.8094853315844	89.952	0.62448	90.403	90.239	90.863	0.45058					29	16	2	0	0	0	0.64922	1	10642	10642		44.117	8.9161	1	1149500	+		38462	19104	25627	25639	43852	43852					0.09130022231261137
NLRVTTLKN	9	Unmodified	_NLRVTTLKN_					0	0	0		ENST00000430462.1_1_17:20016000-20016300:+|nuORF	ENST00000430462.1_1_17:20016000-20016300:+|nuORF	ENST00000430462.1_1_17:20016000-20016300:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.8224487304688	2	529.819473	1057.62439	2.384	0.0012631	0.065546	3.4727E-05	2.4495	0.0012978	529.8193122554347	104.74	1.2264	104.9	104.04	105.27	0.15583					44	30	2	0	0	0	0.64555	1	12762	12762		44.377	7.2181	1	320740			38463	11634	25628	25640	43853	43853					0.09788523117231307
NLRYIVKWRRR	11	Unmodified	_NLRYIVKWRRR_					0	0	0		nc|ENSG00000163531|O94856-4|NFASC;nc|ENSG00000163531|O94856-12|NFASC;nc|ENSG00000163531|O94856-10|NFASC;nc|ENSG00000163531|O94856-3|NFASC;nc|ENSG00000163531|O94856-8|NFASC;nc|ENSG00000163531|O94856-11|NFASC;nc|ENSG00000163531|O94856-6|NFASC;ENSG00000163531|ENST00000339876|NFASC;nc|ENSG00000163531|O94856-7|NFASC;nc|ENSG00000163531|O94856-13|NFASC;nc|ENSG00000163531|O94856-5|NFASC;nc|ENSG00000163531|O94856|NFASC;ENST00000404977.6_1_1:204937408-204955114:+|nuORF;ENST00000512826.5_1_1:204926851-204957975:+|nuORF	nc|ENSG00000163531|O94856-4|NFASC	nc|ENSG00000163531|O94856-4|NFASC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	520.9819946289062	3	520.651304	1558.93208	-0.60943	-0.0003173	-2.0196	-0.0010515	-2.629	-0.0013688	520.6501636940086	108.1	0.82125	108.1	107.92	108.74	0					55	39	2	0	0	0	0.86283	1	11272	11272		5.1424	1.7337	1	3218900			38464	5817	25629	25641	43854	43854					0.17497387438902479
NLRYIVKWRRR	11	Unmodified	_NLRYIVKWRRR_					0	0	0		nc|ENSG00000163531|O94856-4|NFASC;nc|ENSG00000163531|O94856-12|NFASC;nc|ENSG00000163531|O94856-10|NFASC;nc|ENSG00000163531|O94856-3|NFASC;nc|ENSG00000163531|O94856-8|NFASC;nc|ENSG00000163531|O94856-11|NFASC;nc|ENSG00000163531|O94856-6|NFASC;ENSG00000163531|ENST00000339876|NFASC;nc|ENSG00000163531|O94856-7|NFASC;nc|ENSG00000163531|O94856-13|NFASC;nc|ENSG00000163531|O94856-5|NFASC;nc|ENSG00000163531|O94856|NFASC;ENST00000404977.6_1_1:204937408-204955114:+|nuORF;ENST00000512826.5_1_1:204926851-204957975:+|nuORF	nc|ENSG00000163531|O94856-4|NFASC	nc|ENSG00000163531|O94856-4|NFASC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	520.6467895507812	3	520.651304	1558.93208	-1.5477	-0.00080583	-1.5779	-0.00082153	-3.1256	-0.0016274	520.9850181435925	111.93	0.18002	111.91	111.78	111.96	-0.01989					8	6	2	0	0	0	0.8498	1	11921	11921		6.001	2.5923	1	827400			38465	5817	25629	25641	43855	43855					0.17497387438902479
NLRYIVKWRRR	11	Unmodified	_NLRYIVKWRRR_					0	0	0		nc|ENSG00000163531|O94856-4|NFASC;nc|ENSG00000163531|O94856-12|NFASC;nc|ENSG00000163531|O94856-10|NFASC;nc|ENSG00000163531|O94856-3|NFASC;nc|ENSG00000163531|O94856-8|NFASC;nc|ENSG00000163531|O94856-11|NFASC;nc|ENSG00000163531|O94856-6|NFASC;ENSG00000163531|ENST00000339876|NFASC;nc|ENSG00000163531|O94856-7|NFASC;nc|ENSG00000163531|O94856-13|NFASC;nc|ENSG00000163531|O94856-5|NFASC;nc|ENSG00000163531|O94856|NFASC;ENST00000404977.6_1_1:204937408-204955114:+|nuORF;ENST00000512826.5_1_1:204926851-204957975:+|nuORF	nc|ENSG00000163531|O94856-4|NFASC	nc|ENSG00000163531|O94856-4|NFASC	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	520.651304	1558.93208	-0.60936	-0.00031727	-2.0846	-0.0010853	-2.6939	-0.0014026	520.650109460311	111.52	0.85692	111.52	111	111.86	0	-0.17707	0.0022893	NaN	6.001	43	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26149			38466	5817	25629	25641							0.17497387438902479
NLRYIVKWRRR	11	Unmodified	_NLRYIVKWRRR_					0	0	0		nc|ENSG00000163531|O94856-4|NFASC;nc|ENSG00000163531|O94856-12|NFASC;nc|ENSG00000163531|O94856-10|NFASC;nc|ENSG00000163531|O94856-3|NFASC;nc|ENSG00000163531|O94856-8|NFASC;nc|ENSG00000163531|O94856-11|NFASC;nc|ENSG00000163531|O94856-6|NFASC;ENSG00000163531|ENST00000339876|NFASC;nc|ENSG00000163531|O94856-7|NFASC;nc|ENSG00000163531|O94856-13|NFASC;nc|ENSG00000163531|O94856-5|NFASC;nc|ENSG00000163531|O94856|NFASC;ENST00000404977.6_1_1:204937408-204955114:+|nuORF;ENST00000512826.5_1_1:204926851-204957975:+|nuORF	nc|ENSG00000163531|O94856-4|NFASC	nc|ENSG00000163531|O94856-4|NFASC	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	520.651304	1558.93208	-0.042845	-2.2307E-05	-2.8003	-0.001458	-2.8431	-0.0014803	520.6497710129362	111.38	1.0307	111.32	111	112.03	-0.059937	-0.38219	0.0011714	NaN	6.001	78	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	198640			38467	5817	25629	25641							0.17497387438902479
NLRYIVKWRRR	11	Unmodified	_NLRYIVKWRRR_					0	0	0		nc|ENSG00000163531|O94856-4|NFASC;nc|ENSG00000163531|O94856-12|NFASC;nc|ENSG00000163531|O94856-10|NFASC;nc|ENSG00000163531|O94856-3|NFASC;nc|ENSG00000163531|O94856-8|NFASC;nc|ENSG00000163531|O94856-11|NFASC;nc|ENSG00000163531|O94856-6|NFASC;ENSG00000163531|ENST00000339876|NFASC;nc|ENSG00000163531|O94856-7|NFASC;nc|ENSG00000163531|O94856-13|NFASC;nc|ENSG00000163531|O94856-5|NFASC;nc|ENSG00000163531|O94856|NFASC;ENST00000404977.6_1_1:204937408-204955114:+|nuORF;ENST00000512826.5_1_1:204926851-204957975:+|nuORF	nc|ENSG00000163531|O94856-4|NFASC	nc|ENSG00000163531|O94856-4|NFASC	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	520.651304	1558.93208	3.1709	0.001651	-5.6396	-0.0029362	-2.4686	-0.0012853	520.6482426406776	111.78	0.63429	111.76	111.39	112.02	-0.025414	0.054161	-0.0032634	NaN	6.001	61	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38481			38468	5817	25629	25641							0.17497387438902479
NLRYIVKWRRR	11	Unmodified	_NLRYIVKWRRR_					0	0	0		nc|ENSG00000163531|O94856-4|NFASC;nc|ENSG00000163531|O94856-12|NFASC;nc|ENSG00000163531|O94856-10|NFASC;nc|ENSG00000163531|O94856-3|NFASC;nc|ENSG00000163531|O94856-8|NFASC;nc|ENSG00000163531|O94856-11|NFASC;nc|ENSG00000163531|O94856-6|NFASC;ENSG00000163531|ENST00000339876|NFASC;nc|ENSG00000163531|O94856-7|NFASC;nc|ENSG00000163531|O94856-13|NFASC;nc|ENSG00000163531|O94856-5|NFASC;nc|ENSG00000163531|O94856|NFASC;ENST00000404977.6_1_1:204937408-204955114:+|nuORF;ENST00000512826.5_1_1:204926851-204957975:+|nuORF	nc|ENSG00000163531|O94856-4|NFASC	nc|ENSG00000163531|O94856-4|NFASC	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	520.651304	1558.93208	-0.19301	-0.00010049	-2.2121	-0.0011517	-2.4051	-0.0012522	520.6500168106398	111.63	0.61607	111.74	111.48	112.09	0.11118	0.041055	0.0020901	NaN	6.001	22	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1679100			38469	5817	25629	25641							0.17497387438902479
NLRYIVKWRRR	11	Unmodified	_NLRYIVKWRRR_					0	0	0		nc|ENSG00000163531|O94856-4|NFASC;nc|ENSG00000163531|O94856-12|NFASC;nc|ENSG00000163531|O94856-10|NFASC;nc|ENSG00000163531|O94856-3|NFASC;nc|ENSG00000163531|O94856-8|NFASC;nc|ENSG00000163531|O94856-11|NFASC;nc|ENSG00000163531|O94856-6|NFASC;ENSG00000163531|ENST00000339876|NFASC;nc|ENSG00000163531|O94856-7|NFASC;nc|ENSG00000163531|O94856-13|NFASC;nc|ENSG00000163531|O94856-5|NFASC;nc|ENSG00000163531|O94856|NFASC;ENST00000404977.6_1_1:204937408-204955114:+|nuORF;ENST00000512826.5_1_1:204926851-204957975:+|nuORF	nc|ENSG00000163531|O94856-4|NFASC	nc|ENSG00000163531|O94856-4|NFASC	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	520.651304	1558.93208	0.82282	0.0004284	-4.5547	-0.0023714	-3.7319	-0.001943	520.983001000875	111.89	0.22948	111.96	111.92	112.15	0.069542	0.25944	-0.0015689	NaN	6.001	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92354			38470	5817	25629	25641							0.17497387438902479
NLSFLQMRGR	10	Unmodified	_NLSFLQMRGR_					0	0	0			REV__nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6	REV__nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3306274414062	2	611.329682	1220.64481	-0.48858	-0.00029869	-0.084181	-5.1463E-05	-0.57277	-0.00035015	611.3295541194741	78.492	1.0319	78.544	78.268	79.3	0.051674					62	27	4	0	0	0	0.49268	3	7727	7717;7727;7739		56.434	8.7765	1	361320	+		38471	23883	25630	25642	43856;43857;43858	43857					0.04331370505383347
NLSLYSMELVL	11	Unmodified	_NLSLYSMELVL_					0	0	0		nc|ENSG00000122778|Q9HCM3-2|KIAA1549;ENSG00000122778|ENST00000422774|KIAA1549	nc|ENSG00000122778|Q9HCM3-2|KIAA1549	nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.892578125	2	641.341589	1280.66863	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.3	1	105.49	104.99	105.99	0.18647								0	0	0	0.56276	1	12875	12875		36.447	3.6343	1				38472	3245	25631	25643	43859	43859					0.03951746428538172
NLSRCRRK	8	Unmodified	_NLSRCRRK_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;ENST00000470074.1_1_2:160076105-160087520:+|nuORF;ENST00000496406.1_1_2:160084338-160084836:+|nuORF;nc|ENSG00000170921|Q9HCD6|TANC2;nc|ENSG00000170921|Q9HCD6-2|TANC2;ENSG00000170921|ENST00000689528|TANC2	nc|ENSG00000115183|Q9C0D5-2|TANC1;nc|ENSG00000170921|Q9HCD6|TANC2	nc|ENSG00000170921|Q9HCD6|TANC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.793212890625	2	516.795809	1031.57707	-1.5587	-0.00080555	-3.0074	-0.0015542	-4.5661	-0.0023597	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.89043	1	8718	8718		35.618	0.41757	1	755180			38473	2816;6624	25632	25644	43860	43860					0.06253965365249314
NLSRELLT	8	Unmodified	_NLSRELLT_					0	0	0		ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	ENSG00000187240|ENST00000375735|DYNC2H1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.2705993652344	2	473.271824	944.529095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.305	1	28.265	27.765	28.765	-0.039907								0	0	0	0.29245	1	1418	1418		30.504	0	1				38474	7849	25633	25645	43861	43861					0.05461169926195453
NLTAMEGAA	9	Unmodified	_NLTAMEGAA_					0	0	0			REV__ENST00000340424.4_1_20:1651794-1678423:-|nuORF	REV__ENST00000340424.4_1_20:1651794-1678423:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.7644958496094	2	439.207835	876.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.053	1	46.024	45.524	46.524	-0.028782								0	0	0	0.30416	1	3763	3763		29.15	0.89528	1		+		38475	25243	25634	25646	43862	43862					-0.0420271365935605
NLTCMKII	8	Unmodified	_NLTCMKII_					0	0	0		L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|104|3|sense	L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|104|3|sense	L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|104|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.2537841796875	2	468.256274	934.497995	-1.1861	-0.00055538	-2.239	-0.0010484	-3.425	-0.0016038	468.2551087994404	82.125	3.0486	82.125	81.258	84.307	0					145	81	2	0	0	0	0.89043	1	7707	7707		35.618	0.41757	1	128510			38476	14620	25635	25647	43863	43863					0.028125572960789214
NLTDLLYLDLS	11	Unmodified	_NLTDLLYLDLS_					0	0	0		nc|ENSG00000177731|Q13045-3|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENSG00000177731|ENST00000327031|FLII;ENST00000584444.5_1_17:18156710-18162004:-|nuORF;ENST00000478416.1_1_17:18157237-18162004:-|nuORF	nc|ENSG00000177731|Q13045-3|FLII;ENST00000478416.1_1_17:18157237-18162004:-|nuORF	nc|ENSG00000177731|Q13045-3|FLII	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3453979492188	2	640.342643	1278.67073	4.5976	0.002944	1.6667	0.0010673	6.2643	0.0040113	640.3436898921979	103.43	0.74184	103.69	103.46	104.2	0.26524					50	17	4	0	0	0	0.58425	1	12594	12594		45.972	5.1941	1	7001000			38477	7162;12389	25636	25648	43864	43864					0.04254498437990151
NLTGTNSKKSP	11	Unmodified	_NLTGTNSKKSP_					0	0	0		ENSG00000165105|ENST00000376447|RASEF	ENSG00000165105|ENST00000376447|RASEF	ENSG00000165105|ENST00000376447|RASEF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.8121948242188	2	573.809302	1145.60405	-0.078406	-4.499E-05	3.3183	0.0019041	3.2399	0.0018591	573.8111749223793	31.306	0.58889	31.255	30.978	31.567	-0.051031					20	13	2	0	0	0	0.69248	1	1767	1767		32.751	1.2207	1	36789			38478	6046	25637	25649	43865	43865					0.037073076667638816
NLTGTNSKKSP	11	Unmodified	_NLTGTNSKKSP_					0	0	0		ENSG00000165105|ENST00000376447|RASEF	ENSG00000165105|ENST00000376447|RASEF	ENSG00000165105|ENST00000376447|RASEF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	573.809302	1145.60405	-0.75689	-0.00043431	4.3153	0.0024761	3.5584	0.0020418	573.8114221641347	31.175	0.43206	31.193	31	31.432	0.018362	-0.031004	0.0006526	NaN	32.751	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31375			38479	6046	25637	25649							0.037073076667638816
NLTPQNQPH	9	Unmodified	_NLTPQNQPH_					0	0	0		ENST00000483991.5_1_9:138703157-138717996:-|nuORF;nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;ENSG00000130559|ENST00000389532|CAMSAP1;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	ENST00000483991.5_1_9:138703157-138717996:-|nuORF	ENST00000483991.5_1_9:138703157-138717996:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.82763671875	2	524.762155	1047.50976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.34	1	107.45	106.95	107.95	0.10396								0	0	0	0.29273	1	13098	13098		40.778	3.27	1				38480	3656	25638	25650	43866	43866					-0.012097863647341
NLTVLVPS	8	Unmodified	_NLTVLVPS_					0	0	0		ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7516174316406	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.563	1	77.615	77.115	78.115	0.052696								0	0	0	0.29703	1	7509	7509		37.159	11.709	1				38481	4081	25639	25651	43867	43867					0.06383284011519663
NLTVPVGGV	9	Unmodified	_NLTVPVGGV_					0	0	0			REV__ENSG00000106804|ENST00000223642|C5	REV__ENSG00000106804|ENST00000223642|C5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2615051269531	2	428.25036	854.486168	-0.17887	-7.6601E-05	1.5466	0.00066233	1.3677	0.00058573	428.25108957263495	90.744	0.16319	90.814	90.681	90.844	0.069328					5	3	2	0	0	0	0.20789	1	9304	9304		12.207	0	1	136800	+		38482	17631	25640	25652	43868	43868					0.0531039986876749
NLVAIVVL	8	Unmodified	_NLVAIVVL_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.7042541503906	2	420.781296	839.54804	0.15066	6.3393E-05	3.5981	0.001514	3.7487	0.0015774	420.78270837742934	35.998	1.1599	36.101	35.617	36.776	0.10306					67	38	2	0	0	0	0.4196	1	1927	1927		14.664	0	1	102110			38483	6678	25641	25653	43869	43869					0.12184751287907147
NLVAIVVL	8	Unmodified	_NLVAIVVL_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	420.781296	839.54804	-1.9374	-0.0008152	5.4029	0.0022734	3.4655	0.0014582	420.78354478160446	35.993	1.2683	35.993	35.643	36.911	0	-0.084295	0.0010443	NaN	8.8223	50	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114050			38484	6678	25641	25653							0.12184751287907147
NLVAIVVL	8	Unmodified	_NLVAIVVL_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	420.781296	839.54804	-1.8662	-0.00078527	5.5477	0.0023344	3.6815	0.0015491	420.7835087095637	36.019	1.1507	36.051	35.767	36.918	0.031132	-0.02625	0.0011662	NaN	8.8223	48	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101460			38485	6678	25641	25653							0.12184751287907147
NLVAIVVL	8	Unmodified	_NLVAIVVL_					0	0	0		ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	ENSG00000171522|ENST00000302472|PTGER4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	420.781296	839.54804	-0.032165	-1.3535E-05	3.7163	0.0015638	3.6842	0.0015502	420.7828698538178	35.998	0.55761	35.937	35.605	36.163	-0.060333	-0.13953	-0.00037499	NaN	8.8223	26	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107030			38486	6678	25641	25653							0.12184751287907147
NLVEELPK	8	Unmodified	_NLVEELPK_					0	0	0			REV__ENSG00000109471|ENST00000226730|IL2	REV__ENSG00000109471|ENST00000226730|IL2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.79107666015625	2	471.26875	940.522947	-2.1599	-0.0010179	3.595	0.0016942	1.4351	0.0006763	471.27036380947067	39.923	0.97358	39.932	39.224	40.197	0.0092773					30	22	2	0	0	0	0.4196	1	2865	2865		27.882	2.3082	1	85399	+		38487	17760	25642	25654	43870	43870					0.05030651694664812
NLVEELPK	8	Unmodified	_NLVEELPK_					0	0	0			REV__ENSG00000109471|ENST00000226730|IL2	REV__ENSG00000109471|ENST00000226730|IL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2699890136719	2	471.26875	940.522947	-0.67951	-0.00032023	0.81032	0.00038188	0.13081	6.1645E-05	471.2690924244201	62.32	1.3408	62.875	62.214	63.555	0.5545					46	30	3	0	0	0	0.89494	1	6689	6689		37.159	0	1	256600	+		38488	17760	25642	25654	43871	43871					0.05030651694664812
NLVEELPK	8	Unmodified	_NLVEELPK_					0	0	0			REV__ENSG00000109471|ENST00000226730|IL2	REV__ENSG00000109471|ENST00000226730|IL2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	471.26875	940.522947	-1.2886	-0.0006073	2.797	0.0013181	1.5083	0.00071084	471.2699335052058	39.816	0.93031	39.773	39.45	40.381	-0.043694	-0.079675	-0.00044263	NaN	20.947	28	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80012	+		38489	17760	25642	25654							0.05030651694664812
NLVELLLPT	9	Unmodified	_NLVELLLPT_					0	0	0		ENSG00000166415|ENST00000360509|WDR72	ENSG00000166415|ENST00000360509|WDR72	ENSG00000166415|ENST00000360509|WDR72	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3073425292969	2	506.307875	1010.6012	0.256	0.00012961	2.4888	0.0012601	2.7448	0.0013897	506.3090682928902	39.296	1.1693	39.385	39.034	40.203	0.088375					50	30	2	0	0	0	0.7932	1	2421	2421		19.104	0.77911	1	127350			38490	6193	25643	25655	43872	43872					0.09632084279917308
NLVFALGVVSA	11	Unmodified	_NLVFALGVVSA_					0	0	0			REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3167724609375	2	545.318774	1088.623	-0.68757	-0.00037494	-3.0506	-0.0016636	-3.7382	-0.0020385	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.65746	1	8676	8676		37.812	0	1	3608000	+		38491	19131	25644	25656	43873	43873					0.08222889028479585
NLVFALGVVSA	11	Unmodified	_NLVFALGVVSA_					0	0	0			REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3170166015625	2	545.318774	1088.623	-1.4674	-0.00080021	-2.5132	-0.0013705	-3.9807	-0.0021707	545.3172916402864	93.375	2.3581	93.567	93.147	95.505	0.19239					96	56	3	0	0	0	0.69995	1	9487	9487		31.53	0	1	1075700	+		38492	19131	25644	25656	43874	43874					0.08222889028479585
NLVFLARSV	9	Unmodified	_NLVFLARSV_					0	0	0		ENST00000473051.1_1_10:74095570-74096546:-|nuORF	ENST00000473051.1_1_10:74095570-74096546:-|nuORF	ENST00000473051.1_1_10:74095570-74096546:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80352783203125	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.76255	1	8271	8271		35.618	1.4457	1	1874600			38493	12275	25645	25657	43875	43875					0.08902039576855714
NLVFLARSV	9	Unmodified	_NLVFLARSV_					0	0	0		ENST00000473051.1_1_10:74095570-74096546:-|nuORF	ENST00000473051.1_1_10:74095570-74096546:-|nuORF	ENST00000473051.1_1_10:74095570-74096546:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8035888671875	2	509.805834	1017.59712	-0.054339	-2.7702E-05	-4.0902	-0.0020852	-4.1445	-0.0021129	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.69624	1	8801	8801		40.778	3.6191	1	2906900			38494	12275	25645	25657	43876	43876					0.08902039576855714
NLVIEMPVG	9	Unmodified	_NLVIEMPVG_					0	0	0			REV__ENSG00000149428|ENST00000617285|HYOU1	REV__ENSG00000149428|ENST00000617285|HYOU1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.2672424316406	2	486.265153	970.515753	0.08019	3.8993E-05	3.8106	0.0018529	3.8908	0.0018919	486.2668793256364	86.146	4.4086	86.59	84.867	89.275	0.44331					281	107	4	0	0	0	0.74721	1	10239	10239		37.159	0.71236	1	1279400	+		38495	20167	25646	25658	43877	43877					0.029315958226106886
NLVIFHRGDH	10	Unmodified	_NLVIFHRGDH_					0	0	0		nc|ENSG00000145730|P19021-2|PAM;nc|ENSG00000145730|P19021-4|PAM;nc|ENSG00000145730|P19021-3|PAM;nc|ENSG00000145730|P19021-6|PAM;ENSG00000145730|ENST00000438793|PAM;nc|ENSG00000145730|P19021-5|PAM	nc|ENSG00000145730|P19021-2|PAM	nc|ENSG00000145730|P19021-2|PAM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5745544433594	3	403.215873	1206.62579	-0.18884	-7.6142E-05	0.59978	0.00024184	0.41095	0.0001657	403.21637622790945	80.135	0.16847	80.661	80.569	80.737	0.52677					5	3	2	0	0	0	0.37624	1	9239	9239		30.569	16.483	1	40989			38496	4788	25647	25659	43878	43878					0.030741572059923783
NLVIGLGLL	9	Unmodified	_NLVIGLGLL_					0	0	0		ENSG00000115657|ENST00000265316|ABCB6;ENST00000446716.5_1_2:220075515-220081188:-|nuORF;nc|ENSG00000115657|Q9NP58-4|ABCB6	ENSG00000115657|ENST00000265316|ABCB6	ENSG00000115657|ENST00000265316|ABCB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30108642578125	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.7932	1	1998	1998		25.45	4.9683	1	1220600			38497	2864	25648	25660	43879	43879					0.1262842283365444
NLVIGLGLL	9	Unmodified	_NLVIGLGLL_					0	0	0		ENSG00000115657|ENST00000265316|ABCB6;ENST00000446716.5_1_2:220075515-220081188:-|nuORF;nc|ENSG00000115657|Q9NP58-4|ABCB6	ENSG00000115657|ENST00000265316|ABCB6	ENSG00000115657|ENST00000265316|ABCB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3009338378906	2	456.299853	910.585153	-0.75416	-0.00034412	3.5877	0.0016371	2.8336	0.001293	456.3012900851617	35.065	1.7041	35.071	34.727	36.431	0.0063934					112	39	4	0	0	0	0.67235	1	2192	2192		42.474	5.3154	1	634200			38498	2864	25648	25660	43880	43880					0.1262842283365444
NLVIIWNVAE	10	Unmodified	_NLVIIWNVAE_					0	0	0		ENSG00000150627|ENST00000508596|WDR17;nc|ENSG00000150627|Q8IZU2|WDR17	ENSG00000150627|ENST00000508596|WDR17	ENSG00000150627|ENST00000508596|WDR17	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	585.3745727539062	2	585.829506	1169.64446	-0.31812	-0.00018637	0.81262	0.00047606	0.4945	0.00028969	585.8296553651023	59.32	0.95527	59.321	58.878	59.833	0.00051498					37	30	2	0	0	0	0.37624	1	5131	5131		25.574	6.4705	1	99357			38499	5076	25649	25661	43881	43881					0.06642274057207942
NLVISDILFTT	11	Unmodified	_NLVISDILFTT_					0	0	0		ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.345458984375	2	618.347729	1234.6809	-0.32375	-0.00020019	-2.5779	-0.001594	-2.9016	-0.0017942	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.67778	1	10302	10302		35.152	2.3396	1	926440			38500	6501	25650	25662	43882	43882					0.07295106163223863
NLVISDILFTT	11	Unmodified	_NLVISDILFTT_					0	0	0		ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	ENSG00000169508|ENST00000376414|GPR183	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	618.3468627929688	2	618.347729	1234.6809	1.2492	0.00077242	-4.2978	-0.0026576	-3.0487	-0.0018851	618.344978551102	97.744	3.3917	97.971	96.779	100.17	0.22787					230	79	4	0	0	0	0.72106	1	10226	10226		28.081	1.0342	1	960930			38501	6501	25650	25662	43883	43883					0.07295106163223863
NLVKITGAW	9	Unmodified	_NLVKITGAW_					0	0	0			REV__ENSG00000144668|ENST00000264741|ITGA9	REV__ENSG00000144668|ENST00000264741|ITGA9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904968261719	2	501.292559	1000.57057	-0.36653	-0.00018374	-3.8537	-0.0019318	-4.2202	-0.0021156	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.71772	1	9200	9200		39.253	2.0937	1	9903700	+		38502	19906	25651	25663	43884	43884					0.07030350685522535
NLVKITGAW	9	Unmodified	_NLVKITGAW_					0	0	0			REV__ENSG00000144668|ENST00000264741|ITGA9	REV__ENSG00000144668|ENST00000264741|ITGA9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2902526855469	2	501.292559	1000.57057	-0.50311	-0.0002522	-3.7566	-0.0018832	-4.2597	-0.0021354	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.67345	1	8774	8774		42.396	1.618	1	10459000	+		38503	19906	25651	25663	43885	43885					0.07030350685522535
NLVKITGAW	9	Unmodified	_NLVKITGAW_					0	0	0			REV__ENSG00000144668|ENST00000264741|ITGA9	REV__ENSG00000144668|ENST00000264741|ITGA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2928466796875	2	501.292559	1000.57057	-0.86867	-0.00043546	-3.0512	-0.0015296	-3.9199	-0.001965	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.67345	1	9815	9815		42.396	8.2236	1	2445400	+		38504	19906	25651	25663	43886	43886					0.07030350685522535
NLVKKAIYAMV	11	Oxidation (M)	_NLVKKAIYAM(Oxidation (M))V_		NLVKKAIYAM(1)V		NLVKKAIYAM(41)V	0	0	1		nc|ENSG00000139977|Q147X3-2|NAA30;ENSG00000139977|ENST00000556492|NAA30	nc|ENSG00000139977|Q147X3-2|NAA30	nc|ENSG00000139977|Q147X3-2|NAA30	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.368896484375	2	633.367941	1264.72133	1.4714	0.00093196	0.41942	0.00026564	1.8909	0.0011976	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.63176	1	10120	10120		40.778	10.46	1	11430000			38505	4405	25652	25664	43887	43887		77			0.09955749281994031
NLVKLVTLH	9	Unmodified	_NLVKLVTLH_					0	0	0			REV__ENST00000472061.1_1_7:99754715-99755074:-|nuORF	REV__ENST00000472061.1_1_7:99754715-99755074:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8109741210938	2	518.829309	1035.64407	2.0306	0.0010535	4.3474	0.0022556	6.378	0.0033091	518.8321435257167	100.11	0.18795	100.45	100.29	100.48	0.33295					6	4	2	0	0	0	0.20789	1	12106	12106		34.173	0	1	83560	+		38506	20033	25653	25665	43888	43888					0.1276689912801885
NLVKRANEY	9	Unmodified	_NLVKRANEY_					0	0	0			REV__ENSG00000101161|ENST00000266079|PRPF6	REV__ENSG00000101161|ENST00000266079|PRPF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8031005859375	2	553.80128	1105.58801	-0.24786	-0.00013726	3.9825	0.0022055	3.7346	0.0020682	553.8034737708317	67.84	1.0129	68.388	67.938	68.951	0.54819					37	23	2	0	0	0	0.76255	1	7476	7476		35.618	1.6967	1	497640	+		38507	17246	25654	25666	43889	43889					0.03943646220523078
NLVKRLGW	8	Unmodified	_NLVKRLGW_					0	0	0			REV__ENSG00000133116|ENST00000380099|KL	REV__ENSG00000133116|ENST00000380099|KL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.2997131347656	2	493.300719	984.586885	0.076205	3.7592E-05	-3.835	-0.0018918	-3.7588	-0.0018542	493.29854388353033	16.501	0.63078	16.014	15.821	16.452	-0.48718					22	13	2	0	0	0	0.91005	1	179	179		42.474	0	1	494770	+		38508	19060	25655	25667	43890	43890					0.09397476642277525
NLVKRYVAAM	10	Unmodified	_NLVKRYVAAM_					0	0	0		nc|ENSG00000133107|Q9UBN4-4|TRPC4;nc|ENSG00000133107|Q9UBN4-3|TRPC4;nc|ENSG00000133107|Q9UBN4-2|TRPC4;ENSG00000133107|ENST00000379705|TRPC4;nc|ENSG00000133107|Q9UBN4-5|TRPC4;nc|ENSG00000133107|Q9UBN4-6|TRPC4;ENSG00000072315|ENST00000262839|TRPC5;ENST00000426868.6_1_13:38211042-38213329:-|nuORF	nc|ENSG00000133107|Q9UBN4-4|TRPC4	nc|ENSG00000133107|Q9UBN4-4|TRPC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.8336791992188	2	582.831526	1163.6485	0.71631	0.00041749	1.2981	0.00075659	2.0144	0.0011741	582.8322944715994	93.943	3.3707	94.171	93.279	96.65	0.22863					214	80	3	0	0	0	0.74274	1	9590	9590		42.396	3.1433	1	862210			38509	3856	25656	25668	43891	43891					0.07322040279245812
NLVKSSSKR	9	Unmodified	_NLVKSSSKR_					0	0	0		ENSG00000126016|ENST00000371959|AMOT;nc|ENSG00000126016|Q4VCS5-2|AMOT	ENSG00000126016|ENST00000371959|AMOT	ENSG00000126016|ENST00000371959|AMOT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8038330078125	2	509.803823	1017.59309	0.22319	0.00011378	-0.42853	-0.00021847	-0.20534	-0.00010468	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.7932	1	8965	8965		26.693	1.1189	1	3453000			38510	3438	25657	25669	43892	43892					0.08499950083148633
NLVLEKSSR	9	Unmodified	_NLVLEKSSR_					0	0	0		ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.303466796875	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.6204	1	8815	8815		45.972	0	1	9288900			38511	5953	25658	25670	43893	43893					0.07224530363305348
NLVLEKSSR	9	Unmodified	_NLVLEKSSR_					0	0	0		ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3034057617188	2	523.303655	1044.59276	1.4247	0.00074556	-1.721	-0.00090062	-0.29632	-0.00015507	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.73802	2	9005	8849;9005		37.812	2.3088	1	3882100			38512	5953	25658	25670	43894;43895	43895					0.07224530363305348
NLVLEKSSR	9	Unmodified	_NLVLEKSSR_					0	0	0		ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.303955078125	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.33718	1	9692	9692		62.107	24.296	1	13080000			38513	5953	25658	25670	43896	43896					0.07224530363305348
NLVLEKSSR	9	Unmodified	_NLVLEKSSR_					0	0	0		ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.303955078125	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.41984	1	10820	10820		56.434	14.038	1	11944000			38514	5953	25658	25670	43897	43897					0.07224530363305348
NLVLRRFE	8	Unmodified	_NLVLRRFE_					0	0	0			REV__nc|ENSG00000155313|Q9UHP3|USP25	REV__nc|ENSG00000155313|Q9UHP3|USP25	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.2787475585938	2	523.808908	1045.60326	-0.23512	-0.00012316	-1.4966	-0.00078392	-1.7317	-0.00090708	523.8079123013557	46.311	0.48355	46.782	46.496	46.98	0.4714					18	11	2	0	0	0	0.4196	1	4321	4321		25.45	4.9683	1	570940	+		38515	20423	25659	25671	43898	43898					0.08228557808365622
NLVNKISR	8	Unmodified	_NLVNKISR_					0	0	0			REV__ENST00000379715.9_1_6:8080041-8080113:-|nuORF	REV__ENST00000379715.9_1_6:8080041-8080113:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28765869140625	2	472.287808	942.561064	-0.108	-5.1006E-05	-0.19809	-9.3555E-05	-0.30609	-0.00014456	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.87064	2	10144	10144;10254		39.253	5.0803	1	46909000	+		38516	25927	25660	25672	43899;43900	43899					0.0874858239999412
NLVNKISR	8	Unmodified	_NLVNKISR_					0	0	0			REV__ENST00000379715.9_1_6:8080041-8080113:-|nuORF	REV__ENST00000379715.9_1_6:8080041-8080113:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28802490234375	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.86677	1	10016	10016		27.882	1.0861	1	50946000	+		38517	25927	25660	25672	43901	43901					0.0874858239999412
NLVNKISR	8	Unmodified	_NLVNKISR_					0	0	0			REV__ENST00000379715.9_1_6:8080041-8080113:-|nuORF	REV__ENST00000379715.9_1_6:8080041-8080113:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2877197265625	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.89043	1	9982	9982		35.618	0	1	40161000	+		38518	25927	25660	25672	43902	43902					0.0874858239999412
NLVNKISR	8	Unmodified	_NLVNKISR_					0	0	0			REV__ENST00000379715.9_1_6:8080041-8080113:-|nuORF	REV__ENST00000379715.9_1_6:8080041-8080113:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2874755859375	2	472.287808	942.561064	1.4182	0.00066978	-1.3444	-0.00063493	0.07378	3.4846E-05	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.90983	1	11443	11443		42.396	7.1954	1	21289000	+		38519	25927	25660	25672	43903	43903					0.0874858239999412
NLVNKISR	8	Unmodified	_NLVNKISR_					0	0	0			REV__ENST00000379715.9_1_6:8080041-8080113:-|nuORF	REV__ENST00000379715.9_1_6:8080041-8080113:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2873229980469	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.90523	3	11401	11364;11401;11461		42.396	6.7778	1	24731000	+		38520	25927	25660	25672	43904;43905;43906	43905					0.0874858239999412
NLVNRPTN	8	Unmodified	_NLVNRPTN_					0	0	0			REV__nc|ENSG00000152595|Q9NQ76-3|MEPE	REV__nc|ENSG00000152595|Q9NQ76-3|MEPE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.25372314453125	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.90089	1	8334	8334		39.253	2.0937	1	1673200	+		38521	20308	25661	25673	43907	43907					0.027191324691898444
NLVNRPTN	8	Unmodified	_NLVNRPTN_					0	0	0			REV__nc|ENSG00000152595|Q9NQ76-3|MEPE	REV__nc|ENSG00000152595|Q9NQ76-3|MEPE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2538757324219	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.87064	1	8147	8147		29.15	0	1	1324500	+		38522	20308	25661	25673	43908	43908					0.027191324691898444
NLVNRPTN	8	Unmodified	_NLVNRPTN_					0	0	0			REV__nc|ENSG00000152595|Q9NQ76-3|MEPE	REV__nc|ENSG00000152595|Q9NQ76-3|MEPE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.25372314453125	2	464.253966	926.493378	-0.76573	-0.00035549	0.99904	0.00046381	0.2333	0.00010831	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.91982	1	9706	9706		45.972	0.020292	1	1046600	+		38523	20308	25661	25673	43909	43909					0.027191324691898444
NLVNSKLSSK	10	Unmodified	_NLVNSKLSSK_					0	0	0			REV__ENSG00000121621|ENST00000263181|KIF18A	REV__ENSG00000121621|ENST00000263181|KIF18A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3167724609375	2	545.316763	1088.61897	1.1684	0.00063715	-1.2999	-0.00070886	-0.1315	-7.1708E-05	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.80179	1	9019	9019		39.253	0	1	4705800	+		38524	18461	25662	25674	43910	43910					0.07820799534761136
NLVPFKTR	8	Unmodified	_NLVPFKTR_					0	0	0			REV__ENST00000438412.5_1_6:30262511-30262622:-|nuORF	REV__ENST00000438412.5_1_6:30262511-30262622:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7906188964844	2	487.792727	973.5709	-1.0855	-0.00052952	-3.4554	-0.0016855	-4.541	-0.0022151	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.8621	1	7604	7604		26.693	2.1737	1	309700	+		38525	26722	25663	25675	43911	43911					0.08305770405388557
NLVPVIIT	8	Unmodified	_NLVPVIIT_					0	0	0			REV__ENSG00000170953|ENST00000306842|OR8B12	REV__ENSG00000170953|ENST00000306842|OR8B12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77978515625	2	434.778754	867.542954	-1.003	-0.00043608	3.6101	0.0015696	2.6071	0.0011335	434.7801973515074	45.237	1.8216	45.206	44.189	46.01	-0.031067					113	41	4	0	0	0	0.84341	1	3587	3587		24.203	3.7209	1	1431800	+		38526	21705	25664	25676	43912	43912					0.10388447425293634
NLVPVIIT	8	Unmodified	_NLVPVIIT_					0	0	0			REV__ENSG00000170953|ENST00000306842|OR8B12	REV__ENSG00000170953|ENST00000306842|OR8B12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78271484375	2	434.778754	867.542954	-0.97374	-0.00042336	4.0019	0.0017399	3.0281	0.0013166	434.78044280268495	64.271	3.3612	64.301	62.229	65.59	0.030243					229	142	2	0	0	0	0.86288	1	5464	5464		26.796	1.3459	1	223270	+		38527	21705	25664	25676	43913	43913					0.10388447425293634
NLVQRGLN	8	Unmodified	_NLVQRGLN_					0	0	0		ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.26416015625	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.87479	1	7680	7680		30.504	1.3541	1	2957200			38528	11684	25665	25677	43914	43914					0.05435722848858404
NLVQRGLN	8	Unmodified	_NLVQRGLN_					0	0	0		ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26287841796875	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.87064	1	8495	8495		29.15	1.2673	1	4511100			38529	11684	25665	25677	43915	43915					0.05435722848858404
NLVQRGLN	8	Unmodified	_NLVQRGLN_					0	0	0		ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26397705078125	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.87922	1	8342	8342		31.955	1.4512	1	4885100			38530	11684	25665	25677	43916	43916					0.05435722848858404
NLVQRGLN	8	Unmodified	_NLVQRGLN_					0	0	0		ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.263671875	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.89962	1	7543	7543		38.806	1.647	1	1032000			38531	11684	25665	25677	43917	43917					0.05435722848858404
NLVQRRKKRLR	11	Unmodified	_NLVQRRKKRLR_					0	0	0		nc|ENSG00000163126|Q86SG2-2|ANKRD23;ENSG00000163126|ENST00000318357|ANKRD23	nc|ENSG00000163126|Q86SG2-2|ANKRD23	nc|ENSG00000163126|Q86SG2-2|ANKRD23	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7689208984375	3	489.654937	1465.94298	0.1198	5.8662E-05	-0.89829	-0.00043985	-0.77849	-0.00038119	489.98914725220806	17.692	0.423	17.073	16.789	17.212	-0.61912					18	10	3	0	0	0	0.18238	1	265	265		3.026	0.17417	1	45889			38532	5769	25666	25678	43918	43918					0.2286478981318396
NLVQRRKKRLR	11	Unmodified	_NLVQRRKKRLR_					0	0	0		nc|ENSG00000163126|Q86SG2-2|ANKRD23;ENSG00000163126|ENST00000318357|ANKRD23	nc|ENSG00000163126|Q86SG2-2|ANKRD23	nc|ENSG00000163126|Q86SG2-2|ANKRD23	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	489.654937	1465.94298	-0.79945	-0.00039145	-0.65616	-0.00032129	-1.4556	-0.00071275	489.6546607994232	16.927	0.43156	16.973	16.708	17.14	0.0457	-0.027845	0.0003184	NaN	3.026	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69927			38533	5769	25666	25678							0.2286478981318396
NLVQRRKKRLR	11	Unmodified	_NLVQRRKKRLR_					0	0	0		nc|ENSG00000163126|Q86SG2-2|ANKRD23;ENSG00000163126|ENST00000318357|ANKRD23	nc|ENSG00000163126|Q86SG2-2|ANKRD23	nc|ENSG00000163126|Q86SG2-2|ANKRD23	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	489.654937	1465.94298	0.071195	3.4861E-05	-1.0506	-0.00051445	-0.97944	-0.00047959	489.6541029376663	16.849	0.29623	16.908	16.769	17.065	0.059269	-0.092638	-0.00026107	NaN	3.026	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105900			38534	5769	25666	25678							0.2286478981318396
NLVQSLQR	8	Unmodified	_NLVQSLQR_					0	0	0		ENST00000599172.2_1_9:131938181-131938688:+|nuORF	ENST00000599172.2_1_9:131938181-131938688:+|nuORF	ENST00000599172.2_1_9:131938181-131938688:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2774963378906	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.90983	1	8917	8917		42.396	1.618	1	7289200			38535	14373	25667	25679	43919	43919					0.060319920203255606
NLVQSLQR	8	Unmodified	_NLVQSLQR_					0	0	0		ENST00000599172.2_1_9:131938181-131938688:+|nuORF	ENST00000599172.2_1_9:131938181-131938688:+|nuORF	ENST00000599172.2_1_9:131938181-131938688:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774963378906	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.87064	1	8454	8454		29.15	0	1	7438100			38536	14373	25667	25679	43920	43920					0.060319920203255606
NLVQSLQR	8	Unmodified	_NLVQSLQR_					0	0	0		ENST00000599172.2_1_9:131938181-131938688:+|nuORF	ENST00000599172.2_1_9:131938181-131938688:+|nuORF	ENST00000599172.2_1_9:131938181-131938688:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2778625488281	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.90837	1	9893	9893		56.721	5.3856	1	6350300			38537	14373	25667	25679	43921	43921					0.060319920203255606
NLVRAAQK	8	Unmodified	_NLVRAAQK_					0	0	0		ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.77764892578125	2	450.274701	898.534849	1.3487	0.00060726	-1.1312	-0.00050934	0.21747	9.7923E-05	450.27406199232615	114.07	1.0918	114.09	113.32	114.42	0.020027					62	49	2	0	0	0	0.87064	1	13768	13768		29.15	2.3535	1	78909			38538	6723	25668	25680	43922	43922					0.08152313228515595
NLVRKPSSD	9	Unmodified	_NLVRKPSSD_					0	0	0			REV__ENST00000490729.1_1_12:119175913-119176300:-|nuORF	REV__ENST00000490729.1_1_12:119175913-119176300:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2799987792969	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.69624	1	8524	8524		40.778	1.5253	1	1261800	+		38539	27642	25669	25681	43923	43923					0.039116708121468946
NLVRKPSSD	9	Unmodified	_NLVRKPSSD_					0	0	0			REV__ENST00000490729.1_1_12:119175913-119176300:-|nuORF	REV__ENST00000490729.1_1_12:119175913-119176300:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2798767089844	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.71772	1	8733	8733		39.253	1.4413	1	1954800	+		38540	27642	25669	25681	43924	43924					0.039116708121468946
NLVRRPGG	8	Unmodified	_NLVRRPGG_					0	0	0			REV__ENST00000494237.1_1_14:103749412-103749574:+|nuORF	REV__ENST00000494237.1_1_14:103749412-103749574:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7606506347656	2	434.759218	867.503883	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.276	1	87.441	86.941	87.941	0.16473								0	0	0	0.29353	1	8568	8568		28.254	1.4582	1		+		38541	27712	25670	25682	43925	43925					0.06483159914296266
NLVSCDGR	8	Unmodified	_NLVSCDGR_					0	0	0		ENSG00000188162|ENST00000399397|OTOG;nc|ENSG00000188162|Q6ZRI0|OTOG	ENSG00000188162|ENST00000399397|OTOG	ENSG00000188162|ENST00000399397|OTOG	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5976257324219	2	432.205627	862.396701	2.4302	0.0010504	-3.6225	-0.0015657	-1.1923	-0.0005153	432.20307666739717	106.21	0.25667	106.24	106.02	106.28	0.03688					6	5	2	0	0	0	0.4196	1	11616	11616		23.042	0	1	18421			38542	7911	25671	25683	43926	43926					-0.04000178082253569
NLVSERLPIVR	11	Unmodified	_NLVSERLPIVR_					0	0	0			REV__ENSG00000106665|ENST00000223398|CLIP2	REV__ENSG00000106665|ENST00000223398|CLIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5975341796875	3	432.597983	1294.77212	-1.8326	-0.00079276	0.99264	0.00042942	-0.83992	-0.00036335	432.5983701682112	106.14	0.94881	106.2	105.74	106.69	0.053749					97	22	5	0	0	0	0.7434	1	11324	11324		26.75	9.583	1	20584000	+		38543	17622	25672	25684	43927	43927					0.13652414651210165
NLVSISKNGIP	11	Unmodified	_NLVSISKNGIP_					0	0	0			REV__ENST00000449742.6_1_6:30126994-30128439:-|nuORF	REV__ENST00000449742.6_1_6:30126994-30128439:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.3312377929688	2	571.332413	1140.65027	0.87236	0.00049841	-3.3864	-0.0019347	-2.514	-0.0014363	571.3304741505596	102.17	3.4204	102.3	101.59	105.01	0.13523					157	84	4	0	0	0	0.7144	1	10814	10814		29.17	3.1067	1	3995900	+		38544	26859	25673	25685	43928	43928					0.08557372568861865
NLVTEQVRG	9	Unmodified	_NLVTEQVRG_					0	0	0		ENSG00000265107|ENST00000579774|GJA5	ENSG00000265107|ENST00000579774|GJA5	ENSG00000265107|ENST00000579774|GJA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.28076171875	2	508.28018	1014.54581	0.65224	0.00033152	-0.58773	-0.00029873	0.064515	3.2792E-05	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.39367	1	10468	10468		58.23	8.7884	1	1819500			38545	8944	25674	25686	43929	43929					0.039116708121468946
NLVTLLPLE	9	Unmodified	_NLVTLLPLE_					0	0	0		ENST00000460343.5_1_3:53268946-53269411:-|nuORF	ENST00000460343.5_1_3:53268946-53269411:-|nuORF	ENST00000460343.5_1_3:53268946-53269411:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3094482421875	2	506.307875	1010.6012	-0.49937	-0.00025284	2.5452	0.0012887	2.0458	0.0010358	506.30921071470516	49.299	2.411	49.324	47.87	50.281	0.025578					89	62	2	0	0	0	0.7932	1	3892	3892		20.947	0.4651	1	190740			38546	12006	25675	25687	43930	43930					0.09632084279905939
NLVTSQRLA	9	Unmodified	_NLVTSQRLA_					0	0	0			REV__ENST00000356347.3_1_4:247818-248640:+|nuORF	REV__ENST00000356347.3_1_4:247818-248640:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.290283203125	2	501.290548	1000.56654	-0.50774	-0.00025453	0.15503	7.7713E-05	-0.35272	-0.00017681	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.58668	1	8082	8082		47.657	1.6851	1	3014100	+		38547	25387	25676	25688	43931	43931					0.06628261191804086
NLVVLELL	8	Unmodified	_NLVVLELL_					0	0	0			REV__ENSG00000144554|ENST00000675286|FANCD2	REV__ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79302978515625	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.88915	1	2312	2312		35.201	0	1	1834900	+		38548	19898	25677	25689	43932	43932					0.10984716596760791
NLVVLELL	8	Unmodified	_NLVVLELL_					0	0	0			REV__ENSG00000144554|ENST00000675286|FANCD2	REV__ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79217529296875	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.79929	1	2927	2927		18.324	0	1	548640	+		38549	19898	25677	25689	43933	43933					0.10984716596760791
NLVVLELL	8	Unmodified	_NLVVLELL_					0	0	0			REV__ENSG00000144554|ENST00000675286|FANCD2	REV__ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79254150390625	2	456.791861	911.569169	-2.1986	-0.0010043	3.4286	0.0015662	1.23	0.00056186	456.7933193778514	39.928	2.2	40.296	39.048	41.248	0.36797					193	55	5	0	0	0	0.86288	1	3262	3262		26.796	0	1	10973000	+		38550	19898	25677	25689	43934	43934					0.10984716596760791
NLVVMLAEL	9	Unmodified	_NLVVMLAEL_					0	0	0		ENSG00000076826|ENST00000160298|CAMSAP3;nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3	ENSG00000076826|ENST00000160298|CAMSAP3	ENSG00000076826|ENST00000160298|CAMSAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29034423828125	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.76764	1	8920	8920		34.173	4.331	1	9566900			38551	1367	25678	25690	43935	43935					0.06244455373735036
NLWIIKKH	8	Unmodified	_NLWIIKKH_					0	0	0		ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF	ENSG00000009830|ENST00000261534|POMT2	ENSG00000009830|ENST00000261534|POMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.8258666992188	2	526.324194	1050.63383	-0.93594	-0.00049261	2.1786	0.0011466	1.2426	0.00065403	526.3251692142991	71.452	0.88377	71.528	70.921	71.805	0.076225					58	42	2	0	0	0	0.79929	1	6447	6447		18.324	0	1	116590			38552	757	25679	25691	43936	43936					0.110543361934333
NLWIIKKH	8	Unmodified	_NLWIIKKH_					0	0	0		ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF	ENSG00000009830|ENST00000261534|POMT2	ENSG00000009830|ENST00000261534|POMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3191528320312	2	526.324194	1050.63383	-0.97244	-0.00051182	2.2263	0.0011717	1.2538	0.00065993	526.3251154514024	71.986	1.1431	72.066	71.808	72.952	0.080032					69	39	2	0	0	0	0.87922	1	6646	6646		31.955	6.5047	1	108890			38553	757	25679	25691	43937	43937					0.110543361934333
NLWSLVAKVKK	11	Unmodified	_NLWSLVAKVKK_					0	0	0		ENSG00000100426|ENST00000216268|ZBED4	ENSG00000100426|ENST00000216268|ZBED4	ENSG00000100426|ENST00000216268|ZBED4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4058227539062	2	643.403173	1284.79179	-0.02708	-1.7423E-05	4.265	0.0027441	4.2379	0.0027267	643.4057840301668	105.94	1.5968	105.91	105.23	106.82	-0.025146					165	37	6	0	0	0	0.66929	1	11465	11465		36.447	6.129	1	14580000			38554	1839	25680	25692	43938	43938					0.16078790661981657
NLWSLVAKVKK	11	Unmodified	_NLWSLVAKVKK_					0	0	0		ENSG00000100426|ENST00000216268|ZBED4	ENSG00000100426|ENST00000216268|ZBED4	ENSG00000100426|ENST00000216268|ZBED4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.406005859375	2	643.403173	1284.79179	1.7783	0.0011441	2.5766	0.0016578	4.3549	0.0028019	643.4046886151041	105.77	1.7293	105.8	105.04	106.77	0.038322					167	40	5	0	0	0	0.67778	1	11532	11532		35.152	4.8343	1	14066000			38555	1839	25680	25692	43939	43939					0.16078790661981657
NLWSLVAKVKK	11	Unmodified	_NLWSLVAKVKK_					0	0	0		ENSG00000100426|ENST00000216268|ZBED4	ENSG00000100426|ENST00000216268|ZBED4	ENSG00000100426|ENST00000216268|ZBED4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.404296875	2	643.403173	1284.79179	1.777	0.0011433	4.2737	0.0027497	6.0507	0.0038931	643.4059831518348	106.95	1.1451	106.98	106.72	107.86	0.03688					79	26	4	0	0	0	0.66929	1	11838	11838		36.447	4.9169	1	1597700			38556	1839	25680	25692	43940	43940					0.16078790661981657
NLWSLVAKVKK	11	Unmodified	_NLWSLVAKVKK_					0	0	0		ENSG00000100426|ENST00000216268|ZBED4	ENSG00000100426|ENST00000216268|ZBED4	ENSG00000100426|ENST00000216268|ZBED4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4061279296875	2	643.403173	1284.79179	0.94326	0.0006069	4.1966	0.0027001	5.1399	0.003307	643.4057417471539	106.19	1.8486	106.29	106.11	107.96	0.099007					180	44	5	0	0	0	0.70737	1	11336	11336		30.318	2.2362	1	16037000			38557	1839	25680	25692	43941	43941					0.16078790661981657
NLWVAPRRVGK	11	Unmodified	_NLWVAPRRVGK_					0	0	0			REV__ENST00000474254.5_1_7:129940682-129945790:+|nuORF	REV__ENST00000474254.5_1_7:129940682-129945790:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5975036621094	3	432.594684	1294.76222	2.4047	0.0010403	4.4135	0.0019093	6.8182	0.0029495	432.5965673542701	106.31	1.2824	106.34	105.87	107.15	0.03688					86	29	5	0	0	0	0.72374	1	11606	11606		27.644	12.865	1	16046000	+		38558	18773	25681	25693	43942	43942					0.12663271436485957
NLYGHVLSVV	10	Unmodified	_NLYGHVLSVV_					0	0	0			REV__ENST00000503240.5_1_5:148743537-148748214:+|nuORF	REV__ENST00000503240.5_1_5:148743537-148748214:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.8065795898438	2	550.808574	1099.60259	0.35365	0.00019479	-4.0291	-0.0022192	-3.6754	-0.0020245	550.8062169600779	29.995	0.79504	29.952	29.555	30.35	-0.043095					31	17	3	0	0	0	0.73395	1	1582	1582		42.864	3.6114	1	71676	+		38559	19974	25682	25694	43943	43943					0.05677718368656315
NLYLLSTMQ	9	Unmodified	_NLYLLSTMQ_					0	0	0			REV__nc|ENSG00000165383|Q8N456-2|LRRC18	REV__nc|ENSG00000165383|Q8N456-2|LRRC18	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.8449096679688	2	541.781167	1081.54778	-0.65764	-0.0003563	-2.3892	-0.0012944	-3.0468	-0.0016507	541.7798306186146	64.943	2.4598	64.981	63.18	65.639	0.037849					238	100	3	0	0	0	0.20789	1	5525	5525		15.642	2.8301	1	9306800	+		38560	21179	25683	25695	43944	43944					0.010269635057284177
NLYLLSTMQ	9	Unmodified	_NLYLLSTMQ_					0	0	0			REV__nc|ENSG00000165383|Q8N456-2|LRRC18	REV__nc|ENSG00000165383|Q8N456-2|LRRC18	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	541.781167	1081.54778	-1.0529	-0.00057042	-1.8821	-0.0010197	-2.935	-0.0015901	541.779886836631	65.05	0.66843	65.05	64.657	65.325	0	0.10962	0.0012323	NaN	15.642	49	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76100	+		38561	21179	25683	25695							0.010269635057284177
NLYLLSTMQ	9	Unmodified	_NLYLLSTMQ_					0	0	0			REV__nc|ENSG00000165383|Q8N456-2|LRRC18	REV__nc|ENSG00000165383|Q8N456-2|LRRC18	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	541.781167	1081.54778	-0.24703	-0.00013384	-2.7674	-0.0014993	-3.0144	-0.0016331	541.7795211621473	65.084	1.735	65.089	63.902	65.637	0.0046997	0.14874	0.00027303	NaN	15.642	141	60	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1466400	+		38562	21179	25683	25695							0.010269635057284177
NLYLLSTMQ	9	Unmodified	_NLYLLSTMQ_					0	0	0			REV__nc|ENSG00000165383|Q8N456-2|LRRC18	REV__nc|ENSG00000165383|Q8N456-2|LRRC18	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	541.781167	1081.54778	0.57925	0.00031383	-3.2881	-0.0017814	-2.7089	-0.0014676	541.7792499365366	64.86	1.6377	64.826	63.773	65.41	-0.034798	-0.11449	-0.00029125	NaN	15.642	128	52	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1675300	+		38563	21179	25683	25695							0.010269635057284177
NLYLLSTMQ	9	Unmodified	_NLYLLSTMQ_					0	0	0			REV__nc|ENSG00000165383|Q8N456-2|LRRC18	REV__nc|ENSG00000165383|Q8N456-2|LRRC18	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	541.781167	1081.54778	-0.30742	-0.00016655	-2.461	-0.0013333	-2.7684	-0.0014999	541.7796733093058	64.762	1.6899	64.789	63.711	65.401	0.027138	-0.15076	0.00060503	NaN	15.642	127	53	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1600500	+		38564	21179	25683	25695							0.010269635057284177
NLYLLSTMQ	9	Unmodified	_NLYLLSTMQ_					0	0	0			REV__nc|ENSG00000165383|Q8N456-2|LRRC18	REV__nc|ENSG00000165383|Q8N456-2|LRRC18	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	541.781167	1081.54778	0.055168	2.9889E-05	-3.2294	-0.0017497	-3.1743	-0.0017198	541.7793868105811	64.779	2.6512	64.904	63.07	65.721	0.12545	-0.036155	-0.00022765	NaN	15.642	280	114	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10360000	+		38565	21179	25683	25695							0.010269635057284177
NLYLLSTMQ	9	Unmodified	_NLYLLSTMQ_					0	0	0			REV__nc|ENSG00000165383|Q8N456-2|LRRC18	REV__nc|ENSG00000165383|Q8N456-2|LRRC18	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	541.781167	1081.54778	0.51881	0.00028108	-3.5703	-0.0019343	-3.0515	-0.0016533	541.7791933015126	64.818	2.3926	64.942	63.217	65.61	0.12396	0.0022013	-0.00059703	NaN	15.642	258	100	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9574200	+		38566	21179	25683	25695							0.010269635057284177
NLYSKSTP	8	Unmodified	_NLYSKSTP_					0	0	0			REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.2376708984375	2	455.23745	908.460347	1.2582	0.00057276	-2.1672	-0.00098659	-0.90904	-0.00041383	455.23637113946523	107.07	0.70705	107.18	106.82	107.53	0.10396					38	22	2	0	0	0	0.8621	1	13061	13061		26.693	3.6504	1	577770	+		38567	22049	25684	25696	43945	43945					0.002455056264693667
NLYSKSTP	8	Unmodified	_NLYSKSTP_					0	0	0			REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	455.23745	908.460347	-0.95226	-0.00043351	-0.23029	-0.00010484	-1.1826	-0.00053834	455.2372402221874	107.18	0.58591	107.18	107.02	107.61	0	-0.076279	0.0016188	NaN	26.693	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	300240	+		38568	22049	25684	25696							0.002455056264693667
NLYSKSTP	8	Unmodified	_NLYSKSTP_					0	0	0			REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	455.23745	908.460347	-0.13313	-6.0604E-05	-0.94736	-0.00043127	-1.0805	-0.00049188	455.23681667080916	107.43	0.70824	107.4	107.04	107.75	-0.034401	0.14599	0.0009659	NaN	26.693	38	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	256170	+		38569	22049	25684	25696							0.002455056264693667
NLYSKSTP	8	Unmodified	_NLYSKSTP_					0	0	0			REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	455.23745	908.460347	2.7645	0.0012585	-4.2064	-0.0019149	-1.4419	-0.0006564	455.2354125066715	107.29	0.70992	107.25	106.93	107.64	-0.034134	0.00078675	-0.0020013	NaN	26.693	30	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	209150	+		38570	22049	25684	25696							0.002455056264693667
NLYSKSTP	8	Unmodified	_NLYSKSTP_					0	0	0			REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	455.23745	908.460347	1.0243	0.00046631	-2.5093	-0.0011423	-1.4849	-0.00067599	455.23617070588716	107.17	0.62132	107.21	106.9	107.52	0.035622	-0.0479	-0.00045616	NaN	26.693	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162090	+		38571	22049	25684	25696							0.002455056264693667
NLYSKSTP	8	Unmodified	_NLYSKSTP_					0	0	0			REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	455.23745	908.460347	-1.1607	-0.0005284	-0.16187	-7.3689E-05	-1.3226	-0.00060208	455.237298323905	106.99	0.79461	107.13	106.9	107.69	0.13866	-0.12551	0.0016811	NaN	26.693	34	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	485120	+		38572	22049	25684	25696							0.002455056264693667
NLYSKSTP	8	Unmodified	_NLYSKSTP_					0	0	0			REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	455.23745	908.460347	0.75887	0.00034547	-1.8531	-0.00084359	-1.0942	-0.00049812	455.23652428214535	107.31	0.76784	107.4	106.87	107.63	0.091255	0.14308	0.00014127	NaN	26.693	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	312220	+		38573	22049	25684	25696							0.002455056264693667
NLYSKSTP	8	Unmodified	_NLYSKSTP_					0	0	0			REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	455.23745	908.460347	-1.7607	-0.00080156	0.31393	0.00014291	-1.4468	-0.00065865	455.2374695695577	107.32	0.77241	107.35	106.89	107.67	0.036125	0.098736	0.0021143	NaN	26.693	32	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	474680	+		38574	22049	25684	25696							0.002455056264693667
NLYSKSTP	8	Unmodified	_NLYSKSTP_					0	0	0			REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	455.23745	908.460347	1.2582	0.00057276	-2.1672	-0.00098659	-0.90904	-0.00041383	455.23637113946523	107.07	0.70705	107.18	106.82	107.53	0.10396	-0.077104	-0.00014472	NaN	26.693	38	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	577770	+		38575	22049	25684	25696							0.002455056264693667
NLYSKSTP	8	Unmodified	_NLYSKSTP_					0	0	0			REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	REV__ENST00000485946.1_1_13:100806772-100812980:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	455.23745	908.460347	4.4605	0.0020306	-5.4246	-0.0024695	-0.96418	-0.00043893	455.2350074692449	107.04	0.59283	107.19	106.9	107.49	0.14929	-0.0618	-0.0031106	NaN	26.693	36	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	661810	+		38576	22049	25684	25696							0.002455056264693667
NMAKPKQAACY	11	Unmodified	_NMAKPKQAACY_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.7974243164062	2	612.796826	1223.5791	-1.555	-0.0009529	3.7522	0.0022994	2.1972	0.0013465	612.7990621200101	60.094	1.1299	60.127	59.799	60.929	0.032825					88	31	4	0	0	0	0.5603	1	5627	5627		47.657	3.2801	1	2009500			38577	7133	25685	25697	43946	43946					-0.023747867318206772
NMCMFLVAQ	9	Unmodified	_NMCMFLVAQ_					0	0	0			REV__ENSG00000155897|ENST00000286355|ADCY8	REV__ENSG00000155897|ENST00000286355|ADCY8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.6079711914062	2	528.737391	1055.46023	0.1194	6.3131E-05	-4.3813	-0.0023166	-4.2619	-0.0022535	528.7347791766601	74.956	0.37571	75.52	75.289	75.665	0.56458					12	8	2	0	0	0	0.20789	1	8492	8492		29.15	1.2673	1	94692	+		38578	20453	25686	25698	43947	43947					-0.06528276961034862
NMDLRKYLQ	9	Unmodified	_NMDLRKYLQ_					0	0	0		ENST00000221355.10_1_19:40542476-40556265:-|nuORF	ENST00000221355.10_1_19:40542476-40556265:-|nuORF	ENST00000221355.10_1_19:40542476-40556265:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8086547851562	2	590.81079	1179.60703	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.02	1	60.987	60.487	61.487	-0.032509								0	0	0	0.22756	1	5779	5779		66.429	2.8954	1				38579	9169	25687	25699	43948	43948					0.024408595199020056
NMENAKAL	8	Oxidation (M)	_NM(Oxidation (M))ENAKAL_		NM(1)ENAKAL		NM(77)ENAKAL	0	0	1		ENST00000486254.3_1_2:159526197-159533456:+|nuORF;ENST00000480171.7_1_2:159519375-159537186:+|nuORF;nc|ENSG00000144283|Q99569-2|PKP4;nc|ENSG00000169862|Q9UQB3-2|CTNND2;ENSG00000144283|ENST00000389759|PKP4;ENSG00000169862|ENST00000304623|CTNND2	ENST00000486254.3_1_2:159526197-159533456:+|nuORF	ENST00000486254.3_1_2:159526197-159533456:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7198181152344	2	453.72111	905.427666	-0.62079	-0.00028167	-2.0044	-0.00090946	-2.6252	-0.0011911	453.7201197333413	32.703	0.76672	32.829	32.546	33.313	0.12643					35	17	3	0	0	0	0.47906	1	2302	2302		76.847	8.3619	1	462450			38580	4698	25688	25700	43949	43949		82			-0.028830247680275534
NMENAKAL	8	Oxidation (M)	_NM(Oxidation (M))ENAKAL_					0	0	1		ENST00000486254.3_1_2:159526197-159533456:+|nuORF;ENST00000480171.7_1_2:159519375-159537186:+|nuORF;nc|ENSG00000144283|Q99569-2|PKP4;nc|ENSG00000169862|Q9UQB3-2|CTNND2;ENSG00000144283|ENST00000389759|PKP4;ENSG00000169862|ENST00000304623|CTNND2	ENST00000486254.3_1_2:159526197-159533456:+|nuORF	ENST00000486254.3_1_2:159526197-159533456:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	453.72111	905.427666	-1.9859	-0.00090105	2.1496	0.0009753	0.16366	7.4254E-05	453.7219466056545	32.788	0.49655	32.788	32.574	33.07	0	-0.019326	0.0023064	NaN	76.847	37	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50526			38581	4698	25688	25700				82			-0.028830247680275534
NMENAKAL	8	Oxidation (M)	_NM(Oxidation (M))ENAKAL_					0	0	1		ENST00000486254.3_1_2:159526197-159533456:+|nuORF;ENST00000480171.7_1_2:159519375-159537186:+|nuORF;nc|ENSG00000144283|Q99569-2|PKP4;nc|ENSG00000169862|Q9UQB3-2|CTNND2;ENSG00000144283|ENST00000389759|PKP4;ENSG00000169862|ENST00000304623|CTNND2	ENST00000486254.3_1_2:159526197-159533456:+|nuORF	ENST00000486254.3_1_2:159526197-159533456:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	453.72111	905.427666	0.057044	2.5882E-05	-0.080288	-3.6429E-05	-0.023245	-1.0547E-05	453.7210395200643	32.704	0.50096	32.702	32.446	32.947	-0.0016365	-0.10586	0.00028297	NaN	76.847	13	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23169			38582	4698	25688	25700				82			-0.028830247680275534
NMGGDPITVI	10	Unmodified	_NMGGDPITVI_					0	0	0		ENSG00000243649|ENST00000425368|CFB;nc|ENSG00000243649|P00751-2|CFB	ENSG00000243649|ENST00000425368|CFB	ENSG00000243649|ENST00000425368|CFB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7552490234375	2	508.757692	1015.50083	0.50051	0.00025464	-3.4289	-0.0017445	-2.9284	-0.0014899	508.75579424873774	69.849	0.77033	70.395	70.072	70.843	0.54693					35	20	2	0	0	0	0.64457	1	7774	7774		47.657	0	1	509660			38583	8810	25689	25701	43950	43950					-0.0062989604541598965
NMGPGMPM	8	Unmodified	_NMGPGMPM_					0	0	0			REV__ENSG00000130749|ENST00000253048|ZC3H4	REV__ENSG00000130749|ENST00000253048|ZC3H4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.6695251464844	2	417.668977	833.323401	-0.36073	-0.00015067	1.6451	0.0006871	1.2843	0.00053643	417.66953759577365	26.594	1.484	26.556	25.729	27.213	-0.038523					50	34	2	0	0	0	0.83466	1	1216	1216		23.037	3.6767	1	88153	+		38584	18901	25690	25702	43951	43951					-0.09992766120740271
NMGPGMPM	8	Unmodified	_NMGPGMPM_					0	0	0			REV__ENSG00000130749|ENST00000253048|ZC3H4	REV__ENSG00000130749|ENST00000253048|ZC3H4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	417.668977	833.323401	0.44434	0.00018559	0.69349	0.00028965	1.1378	0.00047524	417.66918939204544	26.299	1.1536	26.344	25.667	26.821	0.045507	-0.15753	6.5971E-06	NaN	23.037	55	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48914	+		38585	18901	25690	25702							-0.09992766120740271
NMGPGMPM	8	Unmodified	_NMGPGMPM_					0	0	0			REV__ENSG00000130749|ENST00000253048|ZC3H4	REV__ENSG00000130749|ENST00000253048|ZC3H4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	417.668977	833.323401	-1.9101	-0.0007978	2.8115	0.0011743	0.90139	0.00037648	417.6700834265615	26.616	0.76974	26.683	26.173	26.943	0.066875	0.18084	0.0017759	NaN	23.037	48	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52671	+		38586	18901	25690	25702							-0.09992766120740271
NMGPGMPM	8	Unmodified	_NMGPGMPM_					0	0	0			REV__ENSG00000130749|ENST00000253048|ZC3H4	REV__ENSG00000130749|ENST00000253048|ZC3H4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	417.668977	833.323401	0.061397	2.5644E-05	0.98156	0.00040997	1.043	0.00043561	417.66940488865356	26.274	0.63348	26.379	25.894	26.528	0.1054	-0.12277	0.00024724	NaN	23.037	43	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44880	+		38587	18901	25690	25702							-0.09992766120740271
NMGPGMPM	8	Unmodified	_NMGPGMPM_					0	0	0			REV__ENSG00000130749|ENST00000253048|ZC3H4	REV__ENSG00000130749|ENST00000253048|ZC3H4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	417.668977	833.323401	0.29896	0.00012486	0.8283	0.00034595	1.1273	0.00047082	417.6691740078956	26.344	0.64354	26.372	26.029	26.673	0.02817	-0.13001	0.00011921	NaN	23.037	39	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40904	+		38588	18901	25690	25702							-0.09992766120740271
NMHATVIPEP	10	Unmodified	_NMHATVIPEP_					0	0	0		ENSG00000114446|ENST00000264538|IFT57	ENSG00000114446|ENST00000264538|IFT57	ENSG00000114446|ENST00000264538|IFT57	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.773681640625	2	554.776416	1107.53828	-0.028196	-1.5642E-05	-4.0447	-0.0022439	-4.0729	-0.0022596	554.7740138866297	78.16	2.3927	78.565	78.018	80.411	0.40531					136	56	5	0	0	0	0.4892	1	8948	8948		56.721	1.2168	1	4295800			38589	2771	25691	25703	43952	43952					-0.01118804779821403
NMIIDPSLL	9	Unmodified	_NMIIDPSLL_					0	0	0			REV__nc|ENSG00000142733|O95382-3|MAP3K6	REV__nc|ENSG00000142733|O95382-3|MAP3K6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2800598144531	2	508.27826	1014.54197	0.65225	0.00033152	3.1896	0.0016212	3.8418	0.0019527	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.55097	1	10311	10311		49.442	2.9848	1	1819500	+		38590	19753	25692	25704	43953	43953					0.03527864994077845
NMKLVPVV	8	Unmodified	_NMKLVPVV_					0	0	0		ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2739562988281	2	450.272781	898.531009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.53	1	113.51	113.01	114.01	-0.024811								0	0	0	0.30004	1	12562	12562		21.702	0	1				38591	6856	25693	25705	43954	43954					0.07768507410446546
NMLIKVHK	8	Unmodified	_NMLIKVHK_					0	0	0			REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.796142578125	2	491.796955	981.579357	-1.4864	-0.00073099	-0.75568	-0.00037164	-2.2421	-0.0011026	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.7961	1	4273	4273		17.365	0	1	781720	+		38592	26322	25694	25706	43955	43955					0.08783001050346684
NMLIKVHK	8	Unmodified	_NMLIKVHK_					0	0	0			REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7959899902344	2	491.796955	981.579357	-0.75953	-0.00037354	-1.8549	-0.00091221	-2.6144	-0.0012857	491.7959244094971	46.601	1.9125	46.572	45.843	47.756	-0.028782					158	52	4	0	0	0	0.89494	1	3973	3973		37.159	6.6555	1	3015000	+		38593	26322	25694	25706	43956	43956					0.08783001050346684
NMLIKVHK	8	Unmodified	_NMLIKVHK_					0	0	0			REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7952575683594	2	491.796955	981.579357	-0.58221	-0.00028633	-1.8427	-0.00090624	-2.4249	-0.0011926	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.87922	1	4609	4609		31.955	6.5047	1	792830	+		38594	26322	25694	25706	43957	43957					0.08783001050346684
NMLIKVHK	8	Unmodified	_NMLIKVHK_					0	0	0			REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956848144531	2	491.796955	981.579357	0.38495	0.00018932	-2.7704	-0.0013625	-2.3854	-0.0011731	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.87479	1	4560	4560		30.504	1.3541	1	2075300	+		38595	26322	25694	25706	43958	43958					0.08783001050346684
NMLIKVHK	8	Unmodified	_NMLIKVHK_					0	0	0			REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7955017089844	2	491.796955	981.579357	-0.41148	-0.00020237	-2.1054	-0.0010354	-2.5169	-0.0012378	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.85277	1	4481	4481		25.45	1.2474	1	887820	+		38596	26322	25694	25706	43959	43959					0.08783001050346684
NMLIKVHK	8	Unmodified	_NMLIKVHK_					0	0	0			REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7962341308594	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.131	1	54.715	54.215	55.215	0.58474								0	0	0	0.2939	1	5517	5517		27.882	1.1893	1		+		38597	26322	25694	25706	43960	43960					0.08783001050346684
NMLNRRSF	8	Unmodified	_NMLNRRSF_					0	0	0		nc|ENSG00000136895|Q5VVW2-3|GARNL3;nc|ENSG00000136895|Q5VVW2-2|GARNL3;nc|ENSG00000136895|Q5VVW2-5|GARNL3;ENSG00000136895|ENST00000373387|GARNL3	nc|ENSG00000136895|Q5VVW2-3|GARNL3	nc|ENSG00000136895|Q5VVW2-3|GARNL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.81005859375	2	519.269093	1036.52363	2.898	0.0015048	-3.1907	-0.0016568	-0.29269	-0.00015198	519.7695857940539	102.42	0.21347	102.71	102.6	102.81	0.29865					5	4	2	0	0	0	0.4196	1	12480	12480		47.657	0	1	31425			38598	4154	25695	25707	43961	43961					0.006831678627349902
NMLSTSRKDK	10	Unmodified	_NMLSTSRKDK_					0	0	0		nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA;ENSG00000174197|ENST00000703841|MGA	nc|ENSG00000174197|Q8IWI9-3|MGA	nc|ENSG00000174197|Q8IWI9-3|MGA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.309326171875	2	590.311155	1178.60776	0.30484	0.00017995	-3.2882	-0.0019411	-2.9834	-0.0017611	590.3091273196425	32.679	0.65199	32.625	32.317	32.969	-0.054337					30	14	3	0	0	0	0.50904	1	1930	1930		55.084	13.657	1	144860			38599	6914	25696	25708	43962	43962					0.025596541689537844
NMNEGKEFGFK	11	Unmodified	_NMNEGKEFGFK_					0	0	0			REV__ENSG00000187535|ENST00000426508|IFT140	REV__ENSG00000187535|ENST00000426508|IFT140	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.2508239746094	3	434.204534	1299.59177	0.29122	0.00012645	-2.6592	-0.0011546	-2.368	-0.0010282	434.2033902913685	33.287	0.46566	33.457	33.229	33.695	0.16971					18	10	2	0	0	0	0.17365	1	2393	2393		21.032	0	1	124030	+		38600	22921	25697	25709	43963	43963					-0.046040520679298425
NMSEGDATELM	11	Unmodified	_NMSEGDATELM_					0	0	0			REV__ENSG00000184203|ENST00000618156|PPP1R2	REV__ENSG00000184203|ENST00000618156|PPP1R2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.7481079101562	2	599.241746	1196.46894	0.87278	0.00052301	3.1542	0.0018901	4.027	0.0024131	599.2434998183318	27.186	0.45232	27.214	26.996	27.448	0.02817					53	22	4	0	0	0	0.70737	1	1079	1079		30.318	2.4355	1	148520	+		38601	22652	25698	25710	43964	43964					-0.12143676581536056
NMTGSRDVDI	10	Unmodified	_NMTGSRDVDI_					0	0	0			REV__nc|ENSG00000162909|P17655-2|CAPN2	REV__nc|ENSG00000162909|P17655-2|CAPN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.259033203125	2	554.258588	1106.50262	-0.20418	-0.00011317	0.87987	0.00048768	0.67569	0.00037451	554.2589451632552	71.042	2.142	71.59	71.166	73.308	0.54756					123	51	4	0	0	0	0.49268	1	7927	7927		56.434	6.9922	1	2743300	+		38602	20861	25699	25711	43965	43965					-0.046368870274591245
NMTNSSMNMPS	11	Oxidation (M)	_NM(Oxidation (M))TNSSMNMPS_		NM(1)TNSSMNMPS		NM(35)TNSSM(-35)NM(-42)PS	0	0	1		nc|ENSG00000141380|Q15532-2|SS18;ENSG00000141380|ENST00000415083|SS18	nc|ENSG00000141380|Q15532-2|SS18	nc|ENSG00000141380|Q15532-2|SS18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.7391357421875	2	615.233398	1228.45224	0.14421	8.8721E-05	0.95651	0.00058848	1.1007	0.0006772	615.2337042797833	28.068	0.32471	28.104	27.931	28.255	0.03607					18	11	2	0	0	0	0.60058	1	1307	1307		44.377	9.1765	3	24295			38603	4494	25700	25712	43966	43966		80			-0.15284500739130635
NMTNSSMNMPS	11	Oxidation (M)	_NM(Oxidation (M))TNSSMNMPS_					0	0	1		nc|ENSG00000141380|Q15532-2|SS18;ENSG00000141380|ENST00000415083|SS18	nc|ENSG00000141380|Q15532-2|SS18	nc|ENSG00000141380|Q15532-2|SS18	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	615.233398	1228.45224	-0.0079368	-4.883E-06	0.94656	0.00058235	0.93862	0.00057747	615.2338555406795	28.003	0.54715	27.965	27.757	28.305	-0.038523	-0.06977	-4.1011E-06	NaN	44.377	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36546			38604	4494	25700	25712				80			-0.15284500739130635
NNAPLPRAL	9	Unmodified	_NNAPLPRAL_					0	0	0		nc|ENSG00000165731|P07949-2|RET;ENSG00000165731|ENST00000355710|RET	nc|ENSG00000165731|P07949-2|RET	nc|ENSG00000165731|P07949-2|RET	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.27716064453125	2	483.279983	964.545414	-1.6694	-0.0008068	-0.89717	-0.00043358	-2.5666	-0.0012404	483.27961083626826	95.088	2.1013	95.291	94.82	96.921	0.20242					117	49	4	0	0	0	0.78058	1	9808	9808		30.504	1.3541	1	1301000			38605	6119	25701	25713	43967	43967					0.06172295882936396
NNAYITSSP	9	Unmodified	_NNAYITSSP_					0	0	0			REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7276916503906	2	483.729989	965.445425	-0.37479	-0.0001813	-2.2485	-0.0010876	-2.6232	-0.0012689	483.72877202413065	74.22	0.99418	74.778	74.499	75.493	0.55891					42	23	2	0	0	0	0.64555	1	8416	8416		44.377	6.5657	1	624100	+		38606	15874	25702	25714	43968	43968					-0.03867986241516519
NNAYITSSP	9	Unmodified	_NNAYITSSP_					0	0	0			REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	483.729989	965.445425	-0.78756	-0.00038097	-1.9334	-0.00093522	-2.7209	-0.0013162	483.7290057240881	74.522	0.89771	74.649	74.154	75.052	0.1271	-0.089427	0.00033634	NaN	44.377	54	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114070	+		38607	15874	25702	25714							-0.03867986241516519
NNAYITSSP	9	Unmodified	_NNAYITSSP_					0	0	0			REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	483.729989	965.445425	0.55043	0.00026626	-3.3884	-0.0016391	-2.838	-0.0013728	483.7283173510272	74.586	1.0163	74.718	74.161	75.177	0.13207	-0.020167	-0.0010714	NaN	44.377	51	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133420	+		38608	15874	25702	25714							-0.03867986241516519
NNAYITSSP	9	Unmodified	_NNAYITSSP_					0	0	0			REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	483.729989	965.445425	-1.1945	-0.00057779	-1.5778	-0.00076324	-2.7723	-0.001341	483.7290584064113	74.664	0.8708	74.75	74.273	75.144	0.085907	0.01181	0.0006803	NaN	44.377	48	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97643	+		38609	15874	25702	25714							-0.03867986241516519
NNDDDQEIFV	10	Unmodified	_NNDDDQEIFV_					0	0	0			REV__ENSG00000101972|ENST00000371145|STAG2;REV__nc|ENSG00000101972|Q8N3U4|STAG2	REV__nc|ENSG00000101972|Q8N3U4|STAG2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3662719726562	2	604.756932	1207.49931	1.0508	0.00063547	0.98394	0.00059504	2.0347	0.0012305	604.758097635847	104.88	0.16814	105.04	104.97	105.14	0.16729					5	3	2	0	0	0	0.37624	1	11154	11154		18.262	7.3965	1	28203	+		38610	17314;29747	25703	25715	43969	43969					-0.09613858600482672
NNDKGRVVPII	11	Unmodified	_NNDKGRVVPII_					0	0	0			REV__ENSG00000164199|ENST00000405460|ADGRV1	REV__ENSG00000164199|ENST00000405460|ADGRV1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.8795776367188	2	612.856586	1223.69862	0.28196	0.0001728	-3.3815	-0.0020724	-3.0996	-0.0018996	612.8539070444169	104.89	0.16753	104.93	104.83	104.99	0.039856					5	3	2	0	0	0	0.17551	1	11435	11435		37.812	21.338	1	61786	+		38611	21051	25704	25716	43970	43970					0.09571866208762003
NNEACRIL	8	Carbamidomethyl (C)	_NNEAC(Carbamidomethyl (C))RIL_	NNEAC(1)RIL		NNEAC(91)RIL		0	1	0		nc|ENSG00000079387|Q9P0U3-2|SENP1;ENSG00000079387|ENST00000549518|SENP1	nc|ENSG00000079387|Q9P0U3-2|SENP1	nc|ENSG00000079387|Q9P0U3-2|SENP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7947998046875	2	495.245283	988.476014	-0.70317	-0.00034824	-0.56164	-0.00027815	-1.2648	-0.00062639	495.24375708626997	59.517	0.20141	60.07	59.958	60.16	0.55323					6	4	2	0	0	0	0.4196	1	6295	6295		90.777	11.064	1	101930			38612	1420	25705	25717	43971	43971	19				-0.01868531128104678
NNEEEFTSK	9	Unmodified	_NNEEEFTSK_					0	0	0		ENSG00000158417|ENST00000289371|EIF5B	ENSG00000158417|ENST00000289371|EIF5B	ENSG00000158417|ENST00000289371|EIF5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.2450561523438	2	549.240918	1096.46728	0.40902	0.00022465	0.1581	8.6836E-05	0.56712	0.00031149	549.2408821601733	56.714	0.92148	56.685	56.397	57.318	-0.02866					52	33	2	0	0	0	0.73802	1	5267	5267		37.812	2.1932	1	614600			38613	5475	25706	25718	43972	43972					-0.07709226283623138
NNEFSSAS	8	Unmodified	_NNEFSSAS_					0	0	0		nc|ENSG00000163785|P34925-2|RYK;ENSG00000163785|ENST00000623711|RYK	nc|ENSG00000163785|P34925-2|RYK	nc|ENSG00000163785|P34925-2|RYK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2615051269531	2	428.177589	854.340626	1.4107	0.00060402	-1.1771	-0.00050401	0.23356	0.0001	428.1767613974062	90.88	0.4763	90.813	90.52	90.997	-0.067085					17	11	3	0	0	0	0.4196	1	9508	9508		11.511	0	1	112020			38614	5862	25707	25719	43973	43973					-0.09237107718081461
NNHFITWIL	9	Unmodified	_NNHFITWIL_					0	0	0		ENSG00000132952|ENST00000255304|USPL1;nc|ENSG00000132952|Q5W0Q7-2|USPL1	ENSG00000132952|ENST00000255304|USPL1	ENSG00000132952|ENST00000255304|USPL1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3201293945312	2	579.308741	1156.60293	-0.45246	-0.00026211	-1.728	-0.001001	-2.1804	-0.0012631	579.3071115918904	92.903	1.0436	92.903	92.112	93.156	0					32	23	2	0	0	0	0.20789	1	9154	9154		17.365	0	1	53641			38615	3845	25708	25720	43974	43974					0.030891380885123
NNHLHLVVL	9	Unmodified	_NNHLHLVVL_					0	0	0			REV__ENST00000550851.5_1_12:71833860-71960711:+|nuORF;REV__nc|ENSG00000205213|Q9BXB1-2|LGR4	REV__nc|ENSG00000205213|Q9BXB1-2|LGR4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.2720336914062	2	529.808908	1057.60326	-0.035976	-1.9061E-05	-2.1152	-0.0011207	-2.1512	-0.0011397	529.807827613021	75.872	0.24397	75.92	75.794	76.038	0.047302					8	6	2	0	0	0	0.20789	1	7314	7314		33.516	0	1	31325	+		38616	19531;23544	25709	25721	43975	43975					0.07676557808372309
NNIIYYPQMA	10	Unmodified	_NNIIYYPQMA_					0	0	0		nc|ENSG00000166321|Q86X67-3|NUDT13;ENSG00000166321|ENST00000357321|NUDT13	nc|ENSG00000166321|Q86X67-3|NUDT13	nc|ENSG00000166321|Q86X67-3|NUDT13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	614.3490600585938	2	613.797349	1225.58014	0.11332	6.9556E-05	-0.10133	-6.2195E-05	0.011992	7.361E-06	613.7971992109045	69.082	0.80677	69.629	69.196	70.003	0.54693					51	19	4	0	0	0	0.37624	1	7693	7693		35.618	0	1	701910			38617	6177	25710	25722	43976	43976					-0.023622490912657668
NNIYLFTQ	8	Unmodified	_NNIYLFTQ_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|133|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|133|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7562255859375	2	506.758549	1011.50255	0.81643	0.00041373	-4.4539	-0.0022571	-3.6375	-0.0018433	506.75617183709835	22.755	0.54474	22.815	22.535	23.08	0.060431					31	19	2	0	0	0	0.92457	1	708	708		47.916	3.7988	1	60266	+		38618	29607	25711	25723	43977	43977					-0.002745189651363944
NNIYLFTQ	8	Unmodified	_NNIYLFTQ_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|133|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|133|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7565612792969	2	506.758549	1011.50255	-0.14296	-7.2445E-05	-3.5843	-0.0018164	-3.7273	-0.0018888	506.7565004715063	23.302	0.58158	23.25	22.906	23.487	-0.052113					37	19	3	0	0	0	0.72312	1	807	807		66.429	7.6473	1	63577	+		38619	29607	25711	25723	43978	43978					-0.002745189651363944
NNIYLFTQ	8	Unmodified	_NNIYLFTQ_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|133|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|133|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	506.758549	1011.50255	0.10653	5.3984E-05	-5.7184	-0.0028978	-5.6119	-0.0028439	506.75637757196847	22.88	0.56215	22.968	22.534	23.097	0.088013	0.034591	-0.0012059	NaN	47.916	34	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59450	+		38620	29607	25711	25723							-0.002745189651363944
NNIYLFTQ	8	Unmodified	_NNIYLFTQ_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|133|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|133|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	506.758549	1011.50255	0.71875	0.00036423	-4.4955	-0.0022781	-3.7768	-0.0019139	506.755941771764	23.015	0.28328	23.017	22.91	23.194	0.0018959	0.083477	3.3465E-05	NaN	47.916	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68849	+		38621	29607	25711	25723							-0.002745189651363944
NNKLIRFPAPL	11	Unmodified	_NNKLIRFPAPL_					0	0	0			REV__ENST00000512327.1_1_3:141105285-141105423:+|nuORF	REV__ENST00000512327.1_1_3:141105285-141105423:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8820190429688	2	641.885147	1281.75574	-0.050098	-3.2157E-05	-4.1031	-0.0026337	-4.1532	-0.0026659	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.7342	1	10195	10195		25.574	0	1	3644700	+		38622	27978	25712	25724	43979	43979					0.12613333485114708
NNLTVSLEM	9	Unmodified	_NNLTVSLEM_					0	0	0		ENSG00000138722|ENST00000264790|MMRN1	ENSG00000138722|ENST00000264790|MMRN1	ENSG00000138722|ENST00000264790|MMRN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.7562255859375	2	510.755149	1019.49575	0.59321	0.00030298	3.7093	0.0018946	4.3025	0.0021975	510.75700533051935	72.928	0.71852	73.482	73.108	73.827	0.55386					29	17	2	0	0	0	0.22631	1	8189	8189		71.296	5.4925	1	1085300			38623	4322	25713	25725	43980	43980					-0.013221999080201385
NNLVFFFY	8	Unmodified	_NNLVFFFY_					0	0	0			REV__Tigger1_dup11946|chr22:15828868-15829349:-|1.8398024740242307|0.126984307270513|3.86|60.0|15|3|sense	REV__Tigger1_dup11946|chr22:15828868-15829349:-|1.8398024740242307|0.126984307270513|3.86|60.0|15|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.2918701171875	2	532.26601	1062.51747	1.396	0.00074303	-2.4002	-0.0012776	-1.0042	-0.00053453	532.2647088399829	35.915	1.1583	36.355	35.997	37.156	0.44043					39	28	2	0	0	0	0.4196	1	2747	2747		20.482	0	1	154690	+		38624	30334	25714	25726	43981	43981					-0.01129027097135804
NNNLTVTSP	9	Unmodified	_NNNLTVTSP_					0	0	0			REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.2436218261719	2	480.243264	958.471974	-0.26606	-0.00012778	-0.2399	-0.00011521	-0.50597	-0.00024299	480.24316227273624	32.835	0.74734	32.78	32.401	33.148	-0.05434					33	17	3	0	0	0	0.67345	1	1979	1979		42.396	3.59	1	181300	+		38625	19131	25715	25727	43982	43982					-0.008922973501853448
NNQWPGRP	8	Unmodified	_NNQWPGRP_					0	0	0		ENST00000291294.6_1_19:47123946-47124471:-|nuORF	ENST00000291294.6_1_19:47123946-47124471:-|nuORF	ENST00000291294.6_1_19:47123946-47124471:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7369384765625	2	484.738483	967.462413	-1.3651	-0.00066174	-0.92127	-0.00044658	-2.2864	-0.0011083	484.73761635650465	88.139	1.3252	88.602	88.143	89.469	0.46312					56	32	3	0	0	0	0.88944	1	10412	10412		57.811	0	1	489820			38626	9679	25716	25728	43983	43983					-0.022620208450575774
NNQWPGRP	8	Unmodified	_NNQWPGRP_					0	0	0		ENST00000291294.6_1_19:47123946-47124471:-|nuORF	ENST00000291294.6_1_19:47123946-47124471:-|nuORF	ENST00000291294.6_1_19:47123946-47124471:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	484.738483	967.462413	-0.08988	-4.3569E-05	-5.7512	-0.0027878	-5.8411	-0.0028314	484.73799497409465	88.264	0.16849	88.332	88.267	88.436	0.068161	-0.15013	-0.00068569	NaN	57.811	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35175			38627	9679	25716	25728							-0.022620208450575774
NNQWPGRP	8	Unmodified	_NNQWPGRP_					0	0	0		ENST00000291294.6_1_19:47123946-47124471:-|nuORF	ENST00000291294.6_1_19:47123946-47124471:-|nuORF	ENST00000291294.6_1_19:47123946-47124471:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	484.738483	967.462413	0.67773	0.00032852	-3.2338	-0.0015676	-2.5561	-0.001239	484.7365641108523	88.063	1.1833	88.512	88.017	89.2	0.44893	0.029924	0.0017549	NaN	57.811	53	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	380320			38628	9679	25716	25728							-0.022620208450575774
NNRFEVPHE	9	Unmodified	_NNRFEVPHE_					0	0	0		nc|ENSG00000257335|O43451-1|MGAM;ENSG00000257335|ENST00000475668|MGAM	nc|ENSG00000257335|O43451-1|MGAM	nc|ENSG00000257335|O43451-1|MGAM	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	571.3224487304688	2	571.272887	1140.53122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.97	1	58.97	58.47	59.47	0								0	0	0	0.29134	1	5123	5123		34.173	2.6427	1				38629	8905	25717	25729	43984	43984					-0.03342401335999057
NNSDHDRLHT	10	Unmodified	_NNSDHDRLHT_					0	0	0		nc|ENSG00000278845|Q9BRJ2|MRPL45;ENSG00000278845|ENST00000613675|MRPL45	nc|ENSG00000278845|Q9BRJ2|MRPL45	nc|ENSG00000278845|Q9BRJ2|MRPL45	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.7726440429688	2	604.773782	1207.53301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.89	1	21.833	21.333	22.333	-0.057203								0	0	0	0.45132	1	640	640		23.523	3.5259	1				38630	9036	25718	25730	43985	43985					-0.06245392318055565
NNSEDDLGL	9	Unmodified	_NNSEDDLGL_					0	0	0			REV__ENSG00000100393|ENST00000263253|EP300	REV__ENSG00000100393|ENST00000263253|EP300	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.2812805175781	2	488.714536	975.414519	0.35194	0.000172	-0.78696	-0.0003846	-0.43502	-0.0002126	488.71568952324424	31.663	0.096935	31.645	31.604	31.701	-0.017464					6	4	2	0	0	0	0.20789	1	1453	1453		24.519	11.56	1	44565	+		38631	17187	25719	25731	43986	43986					-0.074171843464228
NNTESLVASSD	11	Unmodified	_NNTESLVASSD_					0	0	0			REV__ENSG00000172244|ENST00000306862|C5orf34	REV__ENSG00000172244|ENST00000306862|C5orf34	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8535766601562	2	568.756932	1135.49931	-1.3911	-0.0007912	-0.76035	-0.00043245	-2.1515	-0.0012237	569.2588074394146	102.14	0.5473	102.28	102.14	102.69	0.13569					19	13	2	0	0	0	0.15701	1	10712	10712		31.634	0	1	82427	+		38632	21814	25720	25732	43987	43987					-0.06301858600477317
NNTIQSILQ	9	Unmodified	_NNTIQSILQ_					0	0	0		nc|ENSG00000127507|Q9UHX3-5|ADGRE2;nc|ENSG00000127507|Q9UHX3-4|ADGRE2;nc|ENSG00000127507|Q9UHX3-6|ADGRE2;nc|ENSG00000127507|Q9UHX3-3|ADGRE2;nc|ENSG00000127507|Q9UHX3-2|ADGRE2;ENSG00000127507|ENST00000315576|ADGRE2;ENST00000360222.8_1_19:14857708-14876689:-|nuORF	nc|ENSG00000127507|Q9UHX3-5|ADGRE2	nc|ENSG00000127507|Q9UHX3-5|ADGRE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7823486328125	2	515.780013	1029.54547	0.80887	0.0004172	3.5589	0.0018356	4.3678	0.0022528	515.7817509816016	15.945	0.44332	15.457	15.296	15.739	-0.48727					19	9	3	0	0	0	0.7932	1	76	76		25.574	1.0549	1	223630			38633	3501	25721	25733	43988	43988					0.03188251092274186
NNTNKQEGF	9	Unmodified	_NNTNKQEGF_					0	0	0		nc|ENSG00000181827|Q2KHR2-1|RFX7;nc|ENSG00000181827|Q2KHR2-2|RFX7;ENSG00000181827|ENST00000559447|RFX7	nc|ENSG00000181827|Q2KHR2-1|RFX7	nc|ENSG00000181827|Q2KHR2-1|RFX7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2404174804688	2	526.243795	1050.47304	0.18829	9.9087E-05	-4.2345	-0.0022284	-4.0462	-0.0021293	526.2412314877313	74.357	2.6099	74.748	74.081	76.691	0.3911					105	62	3	0	0	0	0.44421	1	8562	8562		54.776	5.3348	1	679770			38634	7408	25722	25734	43989	43989					-0.05018082981291627
NNYESQCVTCQ	11	Unmodified	_NNYESQCVTCQ_					0	0	0			REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	644.7498779296875	2	644.750269	1287.48599	-0.4082	-0.00026319	1.2242	0.00078932	0.81603	0.00052614	644.7510284384757	28.542	1.0933	28.502	27.831	28.924	-0.039907					39	28	2	0	0	0	0.75164	1	1435	1435		21.686	1.6553	1	26323	+		38635	20098	25723	25735	43990	43990					-0.14625755975703214
NNYESQCVTCQ	11	Unmodified	_NNYESQCVTCQ_					0	0	0			REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	644.750269	1287.48599	-0.4082	-0.00026319	1.2242	0.00078932	0.81603	0.00052614	644.7510284384757	28.542	1.0933	28.502	27.831	28.924	-0.039907	-0.13245	0.00084805	NaN	21.686	39	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26323	+		38636	20098	25723	25735							-0.14625755975703214
NNYESQCVTCQ	11	Unmodified	_NNYESQCVTCQ_					0	0	0			REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	REV__nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	644.750269	1287.48599	-0.7958	-0.00051309	1.8764	0.0012098	1.0806	0.00069672	644.7512494851434	28.816	0.58906	28.787	28.408	28.997	-0.029207	0.15242	0.001689	NaN	21.686	15	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51026	+		38637	20098	25723	25735							-0.14625755975703214
NPAAAAGA	8	Unmodified	_NPAAAAGA_					0	0	0			REV__ENSG00000133069|ENST00000358024|TMCC2	REV__ENSG00000133069|ENST00000358024|TMCC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3582763671875	1	642.320565	641.313289	1.7013	0.0010928	1.9585	0.001258	3.6598	0.0023508	642.3241268376707	112.74	0.095032	112.77	112.73	112.83	0.028854					4	2	2	0	0	0	0.4196	1	12304	12304		4.6817	0	1	275580	+		38638	19054	25724	25736	43991	43991					-0.021715464678095486
NPADILLHPT	10	Unmodified	_NPADILLHPT_					0	0	0		nc|ENSG00000079308|Q9HBL0-1|TNS1;ENSG00000079308|ENST00000682258|TNS1	nc|ENSG00000079308|Q9HBL0-1|TNS1	nc|ENSG00000079308|Q9HBL0-1|TNS1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.31689453125	2	545.798206	1089.58186	-0.6588	-0.00035957	0.48051	0.00026226	-0.1783	-9.7316E-05	545.7984600388731	90.799	1.4422	90.799	89.823	91.265	0					37	33	2	0	0	0	0.37624	1	8844	8844		32.812	9.7699	1	122460			38639	1415	25725	25737	43992	43992					0.04065127988997119
NPADLITPGRG	11	Unmodified	_NPADLITPGRG_					0	0	0			REV__ENSG00000275183|ENST00000611161|LENG9	REV__ENSG00000275183|ENST00000611161|LENG9	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	556.0479125976562	2	555.798737	1109.58292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.681	1	31.681	31.181	32.181	0								0	0	0	0.56276	1	1533	1533		28.081	1.3886	1		+		38640	24009	25726	25738	43993	43993					0.03251342357907561
NPADSISHVAY	11	Unmodified	_NPADSISHVAY_					0	0	0		nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.2792358398438	2	587.280377	1172.5462	-0.52264	-0.00030694	0.92636	0.00054404	0.40372	0.0002371	587.2808321255627	49.835	0.94662	50.283	49.736	50.682	0.44761					54	22	3	0	0	0	0.00015576	4	4867	4867;4878;4891;4903		136.27	75.296	1	2281400			38641	8045	25727	25739	43994;43995;43996;43997	43994					-0.03316954258639271
NPADSISHVAY	11	Unmodified	_NPADSISHVAY_					0	0	0		nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.2791748046875	2	587.280377	1172.5462	0.60166	0.00035334	-0.26907	-0.00015802	0.33259	0.00019532	587.2800899977933	49.679	0.81891	50.524	50.074	50.893	0.84501					50	19	3	0	0	0	0.040582	3	4867	4867;4880;4894		104.01	55.718	1	2538400			38642	8045	25727	25739	43998;43999;44000	43998					-0.03316954258639271
NPAERLPNL	9	Unmodified	_NPAERLPNL_					0	0	0		ENST00000371804.3_1_10:91152359-91152470:+|nuORF	ENST00000371804.3_1_10:91152359-91152470:+|nuORF	ENST00000371804.3_1_10:91152359-91152470:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2818603515625	2	512.282723	1022.55089	-0.3427	-0.00017556	-2.3981	-0.0012285	-2.7408	-0.0014041	512.2814243636773	86.125	3.8841	86.31	84.842	88.726	0.18523					170	91	2	0	0	0	0.77244	1	8540	8540		32.812	6.1195	1	381930			38643	10676	25728	25740	44001	44001					0.0405197467475773
NPAGAQRLT	9	Unmodified	_NPAGAQRLT_					0	0	0			REV__ENSG00000136826|ENST00000374672|KLF4	REV__ENSG00000136826|ENST00000374672|KLF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2537841796875	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.71772	1	8478	8478		39.253	3.6345	1	1578600	+		38644	19338	25729	25741	44002	44002					0.027191324691784757
NPAGAQRLT	9	Unmodified	_NPAGAQRLT_					0	0	0			REV__ENSG00000136826|ENST00000374672|KLF4	REV__ENSG00000136826|ENST00000374672|KLF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25408935546875	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.69624	1	8159	8159		40.778	1.5253	1	1603800	+		38645	19338	25729	25741	44003	44003					0.027191324691784757
NPAGAQRLT	9	Unmodified	_NPAGAQRLT_					0	0	0			REV__ENSG00000136826|ENST00000374672|KLF4	REV__ENSG00000136826|ENST00000374672|KLF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2542724609375	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.58668	1	8145	8145		47.657	9.8458	1	1482000	+		38646	19338	25729	25741	44004	44004					0.027191324691784757
NPAGAQRLT	9	Unmodified	_NPAGAQRLT_					0	0	0			REV__ENSG00000136826|ENST00000374672|KLF4	REV__ENSG00000136826|ENST00000374672|KLF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2536315917969	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.71772	1	9733	9733		39.253	0.44669	1	1215000	+		38647	19338	25729	25741	44005	44005					0.027191324691784757
NPAGGREKV	9	Unmodified	_NPAGGREKV_					0	0	0		ENST00000550487.5_1_12:50505841-50505931:+|nuORF	ENST00000550487.5_1_12:50505841-50505931:+|nuORF	ENST00000550487.5_1_12:50505841-50505931:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2540588378906	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.71772	1	8123	8123		39.253	0.44669	1	1603800			38648	13656	25730	25742	44006	44006					0.027191324691898444
NPAHTQKSH	9	Unmodified	_NPAHTQKSH_					0	0	0			REV__ENST00000455357.5_1_2:231443948-231444657:-|nuORF	REV__ENST00000455357.5_1_2:231443948-231444657:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8037109375	2	510.254497	1018.49444	-0.90475	-0.00046165	3.1089	0.0015863	2.2042	0.0011247	510.25607953269645	86.592	0.69513	86.592	86.256	86.951	0					26	15	2	0	0	0	0.20789	1	8306	8306		40.778	8.8233	1	242320	+		38649	26940	25731	25743	44007	44007					-0.014066531619050693
NPAIINKM	8	Unmodified	_NPAIINKM_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.75433349609375	2	450.752213	899.489873	0.58167	0.00026219	3.7253	0.0016792	4.307	0.0019414	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.88915	1	7807	7807		35.201	8.4046	1	285810			38650	4137	25732	25744	44008	44008					0.036107463709754484
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2774658203125	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.55097	2	7618	7608;7618		49.442	12.282	1	1311100			38651	4763	25733	25745	44009;44010	44010					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27764892578125	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.69624	5	8204	7972;8092;8104;8204;8265		40.778	3.6476	1	4644500			38652	4763	25733	25745	44011;44012;44013;44014;44015	44014					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2774353027344	2	479.277441	956.540328	-0.098244	-4.7086E-05	0.019792	9.4859E-06	-0.078452	-3.76E-05	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.67345	3	8367	8367;8451;8657		42.396	11.892	1	6799600			38653	4763	25733	25745	44016;44017;44018	44016					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27740478515625	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.48102	2	8288	8266;8288		52.937	10.541	1	2070000			38654	4763	25733	25745	44019;44020	44020					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2778625488281	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.67345	8	8837	8502;8513;8590;8806;8837;8904;9006;9036		42.396	7.3764	1	7289200			38655	4763	25733	25745	44021;44022;44023;44024;44025;44026;44027;44028	44025					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2772216796875	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.69624	1	8328	8328		40.778	4.3314	1	2046100			38656	4763	25733	25745	44029	44029					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773742675781	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.64922	6	8447	8388;8399;8423;8447;8531;8669		44.117	12.162	1	7040000			38657	4763	25733	25745	44030;44031;44032;44033;44034;44035	44033					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2773742675781	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.69624	6	7844	7764;7844;7880;7962;7975;8021		40.778	7.9657	1	2142700			38658	4763	25733	25745	44036;44037;44038;44039;44040;44041	44037					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27752685546875	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.38563	6	8057	8033;8057;8117;8339;8539;8616		58.782	19.176	1	7438100			38659	4763	25733	25745	44042;44043;44044;44045;44046;44047	44043					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2775573730469	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.71772	1	7871	7871		39.253	10.103	1	1802300			38660	4763	25733	25745	44048	44048					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27752685546875	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.6204	3	8415	8330;8354;8415		45.972	5.1941	1	6593200			38661	4763	25733	25745	44049;44050;44051	44051					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2773742675781	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.76764	1	7830	7830		34.173	6.2903	1	1785900			38662	4763	25733	25745	44052	44052					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2773742675781	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.55097	6	8037	8037;8049;8085;8145;8277;8339		49.442	21.559	1	6441000			38663	4763	25733	25745	44053;44054;44055;44056;44057;44058	44053					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2775573730469	2	479.277441	956.540328	0.28639	0.00013726	-0.32449	-0.00015552	-0.038098	-1.826E-05	479.27712266759204	81.87	2.8073	82.296	80.642	83.45	0.42646					178	68	3	0	0	0	0.48102	4	9447	9357;9371;9447;9562		52.937	10.541	1	1790000			38664	4763	25733	25745	44059;44060;44061;44062	44061					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27996826171875	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.71772	1	9825	9825		39.253	3.6345	1	5642300			38665	4763	25733	25745	44063	44063					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2769775390625	2	479.277441	956.540328	-0.72512	-0.00034753	0.71589	0.00034311	-0.0092246	-4.4211E-06	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.55097	2	9469	9378;9469		49.442	7.0454	1	1822400			38666	4763	25733	25745	44064;44065	44065					0.060319920203255606
NPAKRITAS	9	Unmodified	_NPAKRITAS_					0	0	0		nc|ENSG00000145349|Q13557-8|CAMK2D;nc|ENSG00000145349|Q13557-12|CAMK2D;nc|ENSG00000145349|Q13557-9|CAMK2D;nc|ENSG00000145349|Q13557-10|CAMK2D;nc|ENSG00000145349|Q13557-5|CAMK2D;nc|ENSG00000145349|Q13557|CAMK2D;nc|ENSG00000145349|Q13557-3|CAMK2D;nc|ENSG00000145349|Q13557-6|CAMK2D;nc|ENSG00000145349|Q13557-4|CAMK2D;nc|ENSG00000145349|Q13557-11|CAMK2D;ENSG00000145349|ENST00000511664|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	nc|ENSG00000145349|Q13557-8|CAMK2D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2777404785156	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.76255	4	9772	9748;9760;9772;9846		35.618	8.3084	1	6350300			38667	4763	25733	25745	44066;44067;44068;44069	44068					0.060319920203255606
NPAKSRGGP	9	Unmodified	_NPAKSRGGP_					0	0	0		nc|ENSG00000172987|Q8WWQ2-4|HPSE2;nc|ENSG00000172987|Q8WWQ2-3|HPSE2;nc|ENSG00000172987|Q8WWQ2-2|HPSE2;ENSG00000172987|ENST00000370552|HPSE2	nc|ENSG00000172987|Q8WWQ2-4|HPSE2	nc|ENSG00000172987|Q8WWQ2-4|HPSE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2408142089844	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.69624	1	7956	7956		40.778	12.896	1	1219900			38668	6814	25734	25746	44070	44070					0.02122863297722688
NPAKSRGGP	9	Unmodified	_NPAKSRGGP_					0	0	0		nc|ENSG00000172987|Q8WWQ2-4|HPSE2;nc|ENSG00000172987|Q8WWQ2-3|HPSE2;nc|ENSG00000172987|Q8WWQ2-2|HPSE2;ENSG00000172987|ENST00000370552|HPSE2	nc|ENSG00000172987|Q8WWQ2-4|HPSE2	nc|ENSG00000172987|Q8WWQ2-4|HPSE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2406921386719	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.64922	1	7840	7840		44.117	5.3107	1	1094000			38669	6814	25734	25746	44071	44071					0.02122863297722688
NPAKVWTDLR	10	Unmodified	_NPAKVWTDLR_					0	0	0		ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.5549621582031	3	400.555895	1198.64586	-0.40516	-0.00016229	-1.7167	-0.00068765	-2.1219	-0.00084994	400.5551654184751	16.804	0.22807	16.725	16.573	16.801	-0.079056					10	8	2	0	0	0	0.86106	1	154	154		33.922	12.236	1	31621			38670	1721;14802	25735	25747	44072	44072					0.054479081459248846
NPALDPSDH	9	Unmodified	_NPALDPSDH_					0	0	0			REV__ENSG00000137656|ENST00000260210|BUD13	REV__ENSG00000137656|ENST00000260210|BUD13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.3587646484375	2	483.219788	964.425024	-0.30697	-0.00014833	-4.0912	-0.0019769	-4.3981	-0.0021253	483.2170117776224	83.182	0.20535	83.638	83.478	83.684	0.45556					5	4	2	0	0	0	0.20789	1	9668	9668		30.504	24.583	1	34431	+		38671	19398	25736	25748	44073	44073					-0.058611569013237386
NPALFQGT	8	Unmodified	_NPALFQGT_					0	0	0			REV__ENSG00000114126|ENST00000489671|TFDP2	REV__ENSG00000114126|ENST00000489671|TFDP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.21826171875	2	424.21906	846.423567	2.5012	0.0010611	-3.4581	-0.001467	-0.95693	-0.00040595	424.2174916440496	100.89	0.85032	101.24	100.69	101.54	0.34591					53	21	4	0	0	0	0.90523	1	12249	12249		40.778	0.20554	1	1130200	+		38672	18033	25737	25749	44074	44074					-0.005787461994145815
NPALHKRKAL	10	Unmodified	_NPALHKRKAL_					0	0	0			REV__ENST00000402966.1_1_22:42093436-42094048:+|nuORF	REV__ENST00000402966.1_1_22:42093436-42094048:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3555908203125	2	574.356557	1146.69856	1.1071	0.0006359	-2.2805	-0.0013098	-1.1733	-0.0006739	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.8608	1	10621	10621		34.173	8.1092	1	708140	+		38673	26270	25738	25750	44075	44075					0.13107910999428896
NPALYSRAR	9	Unmodified	_NPALYSRAR_					0	0	0		ENSG00000103742|ENST00000352385|IGDCC4;ENST00000559327.1_1_15:65676349-65688574:-|nuORF;nc|ENSG00000103742|Q8TDY8-2|IGDCC4	ENSG00000103742|ENST00000352385|IGDCC4	ENSG00000103742|ENST00000352385|IGDCC4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.82763671875	2	524.28834	1046.56213	2.9292	0.0015357	3.5913	0.0018829	6.5204	0.0034186	524.2896698729028	99.704	1.1088	99.65	99.2	100.31	-0.053741					64	25	3	0	0	0	0.20789	1	10881	10881		45.972	16.802	1	546760			38674	2100	25739	25751	44076	44076					0.04070796768905893
NPALYSRAR	9	Unmodified	_NPALYSRAR_					0	0	0		ENSG00000103742|ENST00000352385|IGDCC4;ENST00000559327.1_1_15:65676349-65688574:-|nuORF;nc|ENSG00000103742|Q8TDY8-2|IGDCC4	ENSG00000103742|ENST00000352385|IGDCC4	ENSG00000103742|ENST00000352385|IGDCC4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.826904296875	2	524.28834	1046.56213	-1.5358	-0.0008052	4.3271	0.0022686	2.7913	0.0014634	524.7944233621531	99.477	0.42153	99.663	99.521	99.942	0.18582					20	9	3	0	0	0	0.20789	1	10291	10291		40.778	1.972	1	36875			38675	2100	25739	25751	44077	44077					0.04070796768905893
NPANTIRK	8	Unmodified	_NPANTIRK_					0	0	0		ENSG00000118985|ENST00000237853|ELL2	ENSG00000118985|ENST00000237853|ELL2	ENSG00000118985|ENST00000237853|ELL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2639465332031	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.87479	1	8225	8225		30.504	1.3541	1	4885100			38676	3050	25740	25752	44078	44078					0.05435722848869773
NPANTIRK	8	Unmodified	_NPANTIRK_					0	0	0		ENSG00000118985|ENST00000237853|ELL2	ENSG00000118985|ENST00000237853|ELL2	ENSG00000118985|ENST00000237853|ELL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2636413574219	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.87064	2	7774	7774;8116		35.618	4.9468	1	4597500			38677	3050	25740	25752	44079;44080	44079					0.05435722848869773
NPANTIRK	8	Unmodified	_NPANTIRK_					0	0	0		ENSG00000118985|ENST00000237853|ELL2	ENSG00000118985|ENST00000237853|ELL2	ENSG00000118985|ENST00000237853|ELL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2631530761719	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.84341	1	7712	7712		24.203	0	1	4061400			38678	3050	25740	25752	44081	44081					0.05435722848869773
NPANTIRK	8	Unmodified	_NPANTIRK_					0	0	0		ENSG00000118985|ENST00000237853|ELL2	ENSG00000118985|ENST00000237853|ELL2	ENSG00000118985|ENST00000237853|ELL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2624206542969	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.89962	3	9760	9268;9385;9760		47.657	14.845	1	3505500			38679	3050	25740	25752	44082;44083;44084	44084					0.05435722848869773
NPANTIRK	8	Unmodified	_NPANTIRK_					0	0	0		ENSG00000118985|ENST00000237853|ELL2	ENSG00000118985|ENST00000237853|ELL2	ENSG00000118985|ENST00000237853|ELL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2638244628906	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.89962	2	9394	9382;9394		47.916	4.6336	1	4402400			38680	3050	25740	25752	44085;44086	44086					0.05435722848869773
NPAPSVFLCL	10	Unmodified	_NPAPSVFLCL_					0	0	0		ENST00000242108.8_1_7:36193818-36193992:+|nuORF	ENST00000242108.8_1_7:36193818-36193992:+|nuORF	ENST00000242108.8_1_7:36193818-36193992:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.7793579101562	2	530.778428	1059.5423	0.74161	0.00039363	-0.20153	-0.00010697	0.54008	0.00028666	530.7784071072364	55.486	0.74778	55.887	55.571	56.319	0.40101					28	17	2	0	0	0	0.77314	1	5676	5676		40.778	5.1599	1	1596500			38681	9253	25741	25753	44087	44087					0.014912847139157748
NPAPVVLPGVL	11	Unmodified	_NPAPVVLPGVL_					0	0	0			REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3264770507812	2	538.329142	1074.64373	-0.51586	-0.0002777	-3.2787	-0.001765	-3.7945	-0.0020427	538.3275058895035	107.82	0.98666	107.82	106.89	107.87	0					48	23	3	0	0	0	0.65746	1	11176	11176		37.812	3.8899	1	4352400	+		38682	19476	25742	25754	44088	44088					0.10939479408148145
NPAPVVLPGVL	11	Unmodified	_NPAPVVLPGVL_					0	0	0			REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	538.329142	1074.64373	-0.15312	-8.2426E-05	-4.5929	-0.0024725	-4.746	-0.0025549	538.3266205939641	107.88	0.27702	107.84	107.61	107.89	-0.042404	-0.062459	-0.00010734	NaN	37.812	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3494900	+		38683	19476	25742	25754							0.10939479408148145
NPAPVVLPGVL	11	Unmodified	_NPAPVVLPGVL_					0	0	0			REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	538.329142	1074.64373	3.5585	0.0019157	-8.3183	-0.004478	-4.7598	-0.0025624	538.3244589980364	107.89	0.32074	107.86	107.6	107.92	-0.031487	-0.03487	-0.0041184	NaN	37.812	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3742000	+		38684	19476	25742	25754							0.10939479408148145
NPAPVVLPGVL	11	Unmodified	_NPAPVVLPGVL_					0	0	0			REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	538.329142	1074.64373	1.2456	0.00067054	-5.4076	-0.0029111	-4.162	-0.0022405	538.326056921083	107.88	0.3661	107.92	107.6	107.97	0.035622	0.018252	-0.00098457	NaN	37.812	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2363200	+		38685	19476	25742	25754							0.10939479408148145
NPAPVVLPGVL	11	Unmodified	_NPAPVVLPGVL_					0	0	0			REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	538.329142	1074.64373	0.070195	3.7788E-05	-4.8586	-0.0026155	-4.7884	-0.0025777	538.326371551914	107.84	0.62893	107.98	107.4	108.03	0.13866	0.079704	-0.00039347	NaN	37.812	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8533600	+		38686	19476	25742	25754							0.10939479408148145
NPAPVVLPGVL	11	Unmodified	_NPAPVVLPGVL_					0	0	0			REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	538.329142	1074.64373	0.8402	0.0004523	-4.954	-0.0026669	-4.1138	-0.0022146	538.3263092147988	107.87	0.51566	107.96	107.5	108.01	0.084404	0.059463	-0.00049613	NaN	37.812	33	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8033300	+		38687	19476	25742	25754							0.10939479408148145
NPAPVVLPGVL	11	Unmodified	_NPAPVVLPGVL_					0	0	0			REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	REV__nc|ENSG00000138463|Q96SL1-2|SLC49A4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	538.329142	1074.64373	-1.4902	-0.0008022	-2.1913	-0.0011796	-3.6815	-0.0019818	538.3277487046322	107.88	0.5209	107.92	107.45	107.97	0.036125	0.020334	0.0024783	NaN	37.812	34	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6963100	+		38688	19476	25742	25754							0.10939479408148145
NPAQSSPHLI	10	Unmodified	_NPAQSSPHLI_					0	0	0			REV__ENST00000471909.1_1_21:45217249-45223652:+|nuORF	REV__ENST00000471909.1_1_21:45217249-45223652:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8170166015625	2	532.28018	1062.54581	-1.2642	-0.00067288	1.6717	0.00088984	0.40759	0.00021695	532.2811539399509	88.578	0.27945	89.049	88.916	89.195	0.47069					10	6	2	0	0	0	0.37624	1	10463	10463		26.693	17.999	1	125120	+		38689	20702	25743	25755	44089	44089					0.017036708121622723
NPARKDIGG	9	Unmodified	_NPARKDIGG_					0	0	0		ENST00000308478.9_1_7:110731416-110762496:+|nuORF;ENST00000464835.1_1_7:110731500-110737228:+|nuORF;ENST00000451085.5_1_7:110731500-110737175:+|nuORF	ENST00000308478.9_1_7:110731416-110762496:+|nuORF	ENST00000308478.9_1_7:110731416-110762496:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2531433105469	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.76255	1	8077	8077		35.618	2.1253	1	946850			38690	9888	25744	25756	44090	44090					0.02719132469201213
NPARKDIGG	9	Unmodified	_NPARKDIGG_					0	0	0		ENST00000308478.9_1_7:110731416-110762496:+|nuORF;ENST00000464835.1_1_7:110731500-110737228:+|nuORF;ENST00000451085.5_1_7:110731500-110737175:+|nuORF	ENST00000308478.9_1_7:110731416-110762496:+|nuORF	ENST00000308478.9_1_7:110731416-110762496:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2543640136719	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.62081	2	8387	8133;8387		45.952	2.4566	1	1482000			38691	9888	25744	25756	44091;44092	44092					0.02719132469201213
NPARKDIGG	9	Unmodified	_NPARKDIGG_					0	0	0		ENST00000308478.9_1_7:110731416-110762496:+|nuORF;ENST00000464835.1_1_7:110731500-110737228:+|nuORF;ENST00000451085.5_1_7:110731500-110737175:+|nuORF	ENST00000308478.9_1_7:110731416-110762496:+|nuORF	ENST00000308478.9_1_7:110731416-110762496:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2538146972656	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.64922	1	8123	8123		44.117	4.864	1	1324500			38692	9888	25744	25756	44093	44093					0.02719132469201213
NPASKPDGPK	10	Unmodified	_NPASKPDGPK_					0	0	0			REV__ENST00000498336.5_1_6:30525121-30529202:+|nuORF	REV__ENST00000498336.5_1_6:30525121-30529202:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.7684020996094	2	505.766906	1009.51926	0.85684	0.00043336	2.6055	0.0013178	3.4623	0.0017511	505.7680579252283	19.316	0.58454	18.686	18.444	19.028	-0.6296					19	12	3	0	0	0	0.86106	1	508	508		33.922	1.1092	1	185660	+		38693	27788	25745	25757	44094	44094					0.014879819208204026
NPASKPTP	8	Unmodified	_NPASKPTP_					0	0	0		chr19:42302325-42303468|60|15.78|0.39|5.33|-|ENST00000599778|PAFAH1B3,PAFAH1B3;ENST00000597333.1_1_19:42804298-42806461:-|nuORF;ENSG00000079462|ENST00000262890|PAFAH1B3	chr19:42302325-42303468|60|15.78|0.39|5.33|-|ENST00000599778|PAFAH1B3,PAFAH1B3	chr19:42302325-42303468|60|15.78|0.39|5.33|-|ENST00000599778|PAFAH1B3,PAFAH1B3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.21783447265625	2	406.21906	810.423567	0.85001	0.00034529	-4.3038	-0.0017483	-3.4538	-0.001403	406.2172575472175	85.862	1.2004	85.788	85.32	86.521	-0.073769					45	27	2	0	0	0	0.87479	1	8834	8834		30.504	3.7075	1	251890			38694	278	25746	25758	44095	44095					0.010772538005767274
NPASPLLL	8	Unmodified	_NPASPLLL_					0	0	0			REV__ENSG00000107951|ENST00000263063|MTPAP	REV__ENSG00000107951|ENST00000263063|MTPAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.74627685546875	2	412.747453	823.480354	0.52297	0.00021586	-3.3456	-0.0013809	-2.8226	-0.001165	412.7459654434172	84.856	2.6272	85.296	84.303	86.93	0.43967					94	64	3	0	0	0	0.86288	1	9886	9886		26.796	1.3459	1	635870	+		38695	17684	25747	25759	44096	44096					0.0615530135711424
NPATALPIITK	11	Unmodified	_NPATALPIITK_					0	0	0			REV__nc|ENSG00000189308|Q6MZP7-3|LIN54	REV__nc|ENSG00000189308|Q6MZP7-3|LIN54	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.2584838867188	2	569.845156	1137.67576	-1.0078	-0.00057426	-0.73454	-0.00041857	-1.7423	-0.00099284	570.3460402764771	72.697	1.2023	73.083	72.293	73.495	0.38581					47	28	2	0	0	0	0.17305	1	8023	8023		30.569	14.927	1	69591	+		38696	23077	25748	25760	44097	44097					0.11242847091284602
NPATFGKC	8	Unmodified	_NPATFGKC_					0	0	0		ENSG00000196460|ENST00000428343|RFX8	ENSG00000196460|ENST00000428343|RFX8	ENSG00000196460|ENST00000428343|RFX8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.1914367675781	2	419.199813	836.385073	1.6593	0.00069556	2.8184	0.0011815	4.4777	0.001877	419.2010403243255	91.35	1.8565	91.8	91.3	93.157	0.44958					72	43	4	0	0	0	0.4196	1	11011	11011		37.159	0.13063	1	736620			38697	8061	25749	25761	44098	44098					-0.03966375105596853
NPATPLGHIL	10	Unmodified	_NPATPLGHIL_					0	0	0		ENST00000551271.5_1_14:105884344-105884518:-|nuORF	ENST00000551271.5_1_14:105884344-105884518:-|nuORF	ENST00000551271.5_1_14:105884344-105884518:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7933349609375	2	516.795466	1031.57638	-0.83709	-0.0004326	-3.0347	-0.0015683	-3.8718	-0.0020009	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.86218	2	8487	8463;8487		32.812	8.2932	1	490270			38698	13670	25750	25762	44099;44100	44100					0.06185449197187154
NPAVGSRIGG	10	Unmodified	_NPAVGSRIGG_					0	0	0		ENST00000358204.8_1_7:115850603-115850747:+|nuORF	ENST00000358204.8_1_7:115850603-115850747:+|nuORF	ENST00000358204.8_1_7:115850603-115850747:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2540588378906	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.82886	1	7874	7874		37.812	2.1932	1	946850			38699	10406	25751	25763	44101	44101					0.02719132469201213
NPAVGSRIGG	10	Unmodified	_NPAVGSRIGG_					0	0	0		ENST00000358204.8_1_7:115850603-115850747:+|nuORF	ENST00000358204.8_1_7:115850603-115850747:+|nuORF	ENST00000358204.8_1_7:115850603-115850747:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2541198730469	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.77314	2	8616	8548;8616		40.778	1.972	1	1449300			38700	10406	25751	25763	44102;44103	44103					0.02719132469201213
NPAVGSRIGG	10	Unmodified	_NPAVGSRIGG_					0	0	0		ENST00000358204.8_1_7:115850603-115850747:+|nuORF	ENST00000358204.8_1_7:115850603-115850747:+|nuORF	ENST00000358204.8_1_7:115850603-115850747:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.25408935546875	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.86218	1	9967	9967		32.812	3.6424	1	1215000			38701	10406	25751	25763	44104	44104					0.02719132469201213
NPCLILVVR	9	Unmodified	_NPCLILVVR_					0	0	0		nc|ENSG00000148634|Q5GLZ8-6|HERC4;nc|ENSG00000148634|Q5GLZ8-3|HERC4;ENSG00000148634|ENST00000373700|HERC4;nc|ENSG00000148634|Q5GLZ8|HERC4;ENST00000427635.6_1_10:69682690-69747802:-|nuORF;ENST00000480158.1_1_10:69714333-69714887:-|nuORF	nc|ENSG00000148634|Q5GLZ8-6|HERC4	nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8096313476562	2	513.810062	1025.60557	-0.18035	-9.2668E-05	-2.1114	-0.0010849	-2.2917	-0.0011775	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.78536	1	4337	4337		29.15	6.1071	1	1777300			38702	4973	25752	25764	44105	44105					0.09379270221802471
NPCLNAYG	8	Unmodified	_NPCLNAYG_					0	0	0			REV__nc|ENSG00000185621|Q96KR4-2|LMLN	REV__nc|ENSG00000185621|Q96KR4-2|LMLN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.179931640625	2	426.189445	850.364338	1.6448	0.00070099	3.5459	0.0015112	5.1907	0.0022122	426.1907398359361	98.331	0.74084	98.707	98.367	99.108	0.37679					33	17	3	0	0	0	0.4196	1	11932	11932		19.36	5.5846	1	278900	+		38703	22780	25753	25765	44106	44106					-0.06682965485265413
NPDAKLKHQI	10	Unmodified	_NPDAKLKHQI_					0	0	0		nc|ENSG00000077327|O75602-2|SPAG6;nc|ENSG00000077327|O75602-5|SPAG6;ENSG00000077327|ENST00000376624|SPAG6;nc|ENSG00000077327|O75602-3|SPAG6	nc|ENSG00000077327|O75602-2|SPAG6	nc|ENSG00000077327|O75602-2|SPAG6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353759765625	2	582.330205	1162.64586	-1.3468	-0.00078429	4.1844	0.0024367	2.8376	0.0016524	582.3325483383459	104.17	0.21379	104.26	104.14	104.36	0.093857					9	4	3	0	0	0	0.37624	1	10990	10990		19.104	0	1	37932			38704	1380	25754	25766	44107	44107					0.07103908145927562
NPDDITNEEY	10	Unmodified	_NPDDITNEEY_					0	0	0		ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000224411|Q14568|HSP90AA2P	ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.2488403320312	2	605.24894	1208.48333	0.40437	0.00024475	-0.80001	-0.00048421	-0.39564	-0.00023946	605.2482531406022	51.935	0.57452	52.359	52.106	52.681	0.42348					26	13	3	0	0	0	0.76096	1	5180	5180		41.427	2.1738	1	921640			38705	1452	25755	25767	44108	44108					-0.11257564837364953
NPDDITNEEY	10	Unmodified	_NPDDITNEEY_					0	0	0		ENSG00000080824|ENST00000216281|HSP90AA1;nc|ENSG00000080824|P07900-2|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000224411|Q14568|HSP90AA2P	ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000080824|ENST00000216281|HSP90AA1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	605.24894	1208.48333	0.50442	0.0003053	-0.48618	-0.00029426	0.018236	1.1037E-05	605.2486664253133	51.736	0.49142	52.403	52.105	52.596	0.6673	0.022339	8.0327E-05	NaN	41.427	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1020300			38706	1452	25755	25767							-0.11257564837364953
NPDDVFREF	9	Unmodified	_NPDDVFREF_					0	0	0		ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;nc|ENSG00000105993|O75190-4|DNAJB6;ENST00000485817.1_1_3:125063303-125063474:-|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.7617797851562	2	569.76182	1137.50909	0.69903	0.00039828	-0.98512	-0.00056128	-0.28609	-0.000163	569.7611957436872	67.748	0.95515	68.133	67.781	68.737	0.38483					46	22	3	0	0	0	0.065543	2	7440	7420;7440		101.46	48.108	1	418750			38707	2271	25756	25768	44109;44110	44110					-0.05416625804423347
NPDDVFREF	9	Unmodified	_NPDDVFREF_					0	0	0		ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;nc|ENSG00000105993|O75190-4|DNAJB6;ENST00000485817.1_1_3:125063303-125063474:-|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	569.76182	1137.50909	0.54156	0.00030856	-0.37642	-0.00021447	0.16514	9.4091E-05	569.7614396664527	67.707	0.7965	68.256	67.862	68.659	0.54819	0.061216	0.00044551	NaN	101.46	43	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	441190			38708	2271	25756	25768							-0.05416625804423347
NPDGRTVR	8	Unmodified	_NPDGRTVR_					0	0	0		nc|ENSG00000137094|O75953|DNAJB5;ENSG00000137094|ENST00000682809|DNAJB5;nc|ENSG00000137094|O75953-5|DNAJB5	nc|ENSG00000137094|O75953|DNAJB5	nc|ENSG00000137094|O75953|DNAJB5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2635498046875	2	457.743765	913.472977	-0.13078	-5.9864E-05	-0.01045	-4.7835E-06	-0.14123	-6.4647E-05	457.74396922535476	83.395	3.1151	83.461	82.133	85.248	0.066719					100	71	2	0	0	0	0.4196	1	8460	8460		42.396	25.031	1	125220			38709	4171	25757	25769	44111	44111					0.012779618093759382
NPDKLEQLKLR	11	Unmodified	_NPDKLEQLKLR_					0	0	0			REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9325256347656	3	451.933143	1352.7776	-0.99129	-0.000448	-0.032148	-1.4529E-05	-1.0234	-0.00046253	451.9330862164875	100.92	2.2384	100.92	100.04	102.28	0					149	53	4	0	0	0	0.7722	1	10233	10233		17.135	1.214	1	534780	+		38710	19654	25758	25770	44112	44112					0.1153209344302013
NPDKLEQLKLR	11	Unmodified	_NPDKLEQLKLR_					0	0	0			REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9320983886719	3	451.933143	1352.7776	2.5866	0.001169	-3.6315	-0.0016412	-1.0449	-0.00047222	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.73277	2	10824	10824;10902		25.892	2.5138	1	1152500	+		38711	19654	25758	25770	44113;44114	44113					0.1153209344302013
NPDKLEQLKLR	11	Unmodified	_NPDKLEQLKLR_					0	0	0			REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9326171875	3	451.933143	1352.7776	0.75363	0.00034059	-1.7779	-0.00080347	-1.0242	-0.00046289	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.75457	1	10551	10551		21.032	1.4053	1	952120	+		38712	19654	25758	25770	44115	44115					0.1153209344302013
NPDKLEQLKLR	11	Unmodified	_NPDKLEQLKLR_					0	0	0			REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.933349609375	3	451.933143	1352.7776	-1.7713	-0.0008005	0.78925	0.00035669	-0.98202	-0.00044381	451.93340802352935	100.57	2.3737	100.74	99.884	102.26	0.17199					164	56	4	0	0	0	0.76087	2	10412	10412;10497		19.627	2.4602	1	618930	+		38713	19654	25758	25770	44116;44117	44116					0.1153209344302013
NPDKLEQLKLR	11	Unmodified	_NPDKLEQLKLR_					0	0	0			REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	REV__nc|ENSG00000140995|Q6ZN54-4|DEF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.93304443359375	3	451.933143	1352.7776	2.1819	0.00098608	-3.1717	-0.0014334	-0.98977	-0.00044731	451.9316131706083	100.36	1.9025	100.71	99.62	101.52	0.3459					138	47	4	0	0	0	0.70278	1	12165	12165		31.068	1.5174	1	885260	+		38714	19654	25758	25770	44118	44118					0.1153209344302013
NPDKVHRDF	9	Unmodified	_NPDKVHRDF_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;ENST00000488988.5_1_3:52422617-52433783:+|nuORF;ENST00000486752.5_1_3:52422617-52434459:+|nuORF	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.28369140625	2	564.283254	1126.55196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.998	1	85.438	84.938	85.938	0.43967								0	0	0	0.31001	1	9911	9911		42.864	0	1				38715	2792	25759	25771	44119	44119					-0.00625810956330497
NPDLRLRG	8	Unmodified	_NPDLRLRG_					0	0	0		ENST00000502424.1_1_5:14797477-14798464:-|nuORF;ENST00000486166.1_1_X:16871803-16876886:-|nuORF;nc|ENSG00000162521|Q09028-4|RBBP4;nc|ENSG00000162521|Q09028-3|RBBP4;nc|ENSG00000162521|Q09028-2|RBBP4;ENSG00000162521|ENST00000373493|RBBP4;ENSG00000102054|ENST00000380087|RBBP7;nc|ENSG00000102054|Q16576-2|RBBP7	ENST00000502424.1_1_5:14797477-14798464:-|nuORF;ENSG00000102054|ENST00000380087|RBBP7	ENST00000502424.1_1_5:14797477-14798464:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7692565917969	2	470.769783	939.525013	-0.6824	-0.00032125	-0.88888	-0.00041846	-1.5713	-0.00073971	470.7692716154138	50.88	1.3539	50.856	50.427	51.781	-0.02343					91	38	3	0	0	0	0.88601	1	4457	4457		34.173	1.3601	1	670480			38716	12851;1985	25760	25772	44120	44120					0.052831252231385406
NPDLRLRG	8	Unmodified	_NPDLRLRG_					0	0	0		ENST00000502424.1_1_5:14797477-14798464:-|nuORF;ENST00000486166.1_1_X:16871803-16876886:-|nuORF;nc|ENSG00000162521|Q09028-4|RBBP4;nc|ENSG00000162521|Q09028-3|RBBP4;nc|ENSG00000162521|Q09028-2|RBBP4;ENSG00000162521|ENST00000373493|RBBP4;ENSG00000102054|ENST00000380087|RBBP7;nc|ENSG00000102054|Q16576-2|RBBP7	ENST00000502424.1_1_5:14797477-14798464:-|nuORF;ENSG00000102054|ENST00000380087|RBBP7	ENST00000502424.1_1_5:14797477-14798464:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.76910400390625	2	470.769783	939.525013	-0.38802	-0.00018267	-0.92797	-0.00043686	-1.316	-0.00061953	470.76920559370467	50.764	1.147	50.672	50.317	51.464	-0.091797					76	32	3	0	0	0	0.87422	1	3981	3981		30.318	1.1477	1	1480000			38717	12851;1985	25760	25772	44121	44121					0.052831252231385406
NPDLVKVLEVI	11	Unmodified	_NPDLVKVLEVI_					0	0	0			REV__CON__P34955	REV__CON__P34955	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8695678710938	2	619.871371	1237.72819	0.5439	0.00033715	-3.7831	-0.002345	-3.2392	-0.0020079	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.73893	1	11347	11347		24.519	0.99649	1	1280900	+	+	38718	15990	25761	25773	44122	44122					0.11883385434225602
NPDPAVYQL	9	Unmodified	_NPDPAVYQL_					0	0	0		nc|ENSG00000277734|P01848|TRAC	nc|ENSG00000277734|P01848|TRAC	nc|ENSG00000277734|P01848|TRAC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.75775146484375	2	508.756007	1015.49746	-0.43112	-0.00021933	0.41512	0.00021119	-0.015999	-8.1395E-06	508.75606889010743	63.729	0.69307	64.116	63.79	64.483	0.38681					38	15	3	0	0	0	0.21969	1	6875	6875		71.877	3.0906	1	328910			38719	15316	25762	25774	44123	44123					-0.00966822827751912
NPDPAVYQL	9	Unmodified	_NPDPAVYQL_					0	0	0		nc|ENSG00000277734|P01848|TRAC	nc|ENSG00000277734|P01848|TRAC	nc|ENSG00000277734|P01848|TRAC	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	508.756007	1015.49746	0.92354	0.00046986	-0.94896	-0.00048279	-0.025423	-1.2934E-05	508.75538702998495	63.673	1.0094	64.227	63.72	64.729	0.55449	0.05548	-0.00077387	NaN	71.877	48	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	357590			38720	15316	25762	25774							-0.00966822827751912
NPDVWLKHR	9	Unmodified	_NPDVWLKHR_					0	0	0			REV__ENSG00000198610|ENST00000263126|AKR1C4	REV__ENSG00000198610|ENST00000263126|AKR1C4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3533935546875	2	582.817264	1163.61998	-1.3453	-0.00078406	3.7884	0.002208	2.4432	0.0014239	583.3214347823593	104.09	0.24786	104.18	103.98	104.23	0.093857					8	5	2	0	0	0	0.20789	1	10976	10976		14.137	0	1	37002	+		38721	23345	25763	25775	44124	44124					0.0447105869434381
NPEASDEGTW	10	Unmodified	_NPEASDEGTW_					0	0	0			REV__ENSG00000109610|ENST00000382120|SOD3	REV__ENSG00000109610|ENST00000382120|SOD3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.8988647460938	2	553.225268	1104.43598	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.838	1	70.876	70.376	71.376	0.038055								0	0	0	0.45132	1	6782	6782		42.864	18.662	1		+		38722	17764	25764	25776	44125	44125					-0.11205799317690435
NPEHASVAM	9	Unmodified	_NPEHASVAM_					0	0	0		ENST00000466764.5_1_X:48433568-48434262:+|nuORF;ENST00000491240.5_1_X:48433911-48434199:+|nuORF;ENST00000488216.5_1_X:48433568-48434199:+|nuORF;ENSG00000102317|ENST00000376759|RBM3	ENST00000466764.5_1_X:48433568-48434262:+|nuORF	ENST00000466764.5_1_X:48433568-48434262:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.2205810546875	2	478.218734	954.422915	-0.063636	-3.0432E-05	0.079411	3.7976E-05	0.015775	7.5441E-06	478.2186397672493	31.446	0.47382	31.526	31.297	31.771	0.079834					21	10	3	0	0	0	0.19953	1	2134	2134		73.975	10.668	1	274100			38723	2001	25765	25777	44126	44126					-0.05611908910782404
NPEHVKLLI	9	Unmodified	_NPEHVKLLI_					0	0	0		nc|ENSG00000119509|Q9Y283-2|INVS;ENSG00000119509|ENST00000262457|INVS	nc|ENSG00000119509|Q9Y283-2|INVS	nc|ENSG00000119509|Q9Y283-2|INVS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8171997070312	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.7932	1	8324	8324		26.693	3.6504	1	1422300			38724	3073	25766	25778	44127	44127					0.09498308748334239
NPEHVKLLI	9	Unmodified	_NPEHVKLLI_					0	0	0		nc|ENSG00000119509|Q9Y283-2|INVS;ENSG00000119509|ENST00000262457|INVS	nc|ENSG00000119509|Q9Y283-2|INVS	nc|ENSG00000119509|Q9Y283-2|INVS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.816650390625	2	531.818941	1061.62333	0.49482	0.00026316	-4.4068	-0.0023436	-3.912	-0.0020805	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.76255	1	10119	10119		35.618	1.4457	1	1227700			38725	3073	25766	25778	44128	44128					0.09498308748334239
NPELLLHAL	9	Unmodified	_NPELLLHAL_					0	0	0		ENST00000371558.6_1_X:118718085-118718250:+|nuORF	ENST00000371558.6_1_X:118718085-118718250:+|nuORF	ENST00000371558.6_1_X:118718085-118718250:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2962646484375	2	510.297842	1018.58113	0.458	0.00023372	-0.42244	-0.00021557	0.035565	1.8149E-05	510.29753942254996	61.838	0.97779	62.392	61.971	62.949	0.55386					43	22	2	0	0	0	0.11055	1	6654	6654		90.37	13.052	1	878540			38726	10666	25767	25779	44129	44129					0.07258333339939327
NPELVRAV	8	Unmodified	_NPELVRAV_					0	0	0		ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	ENSG00000138078|ENST00000409411|PREPL	ENSG00000138078|ENST00000409411|PREPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.25946044921875	2	449.261259	896.507966	-1.381	-0.00062045	-0.0050338	-2.2615E-06	-1.3861	-0.00062271	449.26107911518943	71.508	1.165	71.892	71.126	72.291	0.38449					61	27	3	0	0	0	0.7961	1	7923	7923		17.365	0	1	1175400			38727	4265	25768	25780	44130	44130					0.05557204617332445
NPETGSCC	8	Unmodified	_NPETGSCC_					0	0	0		ENST00000547395.1_1_12:49392421-49412044:+|nuORF	ENST00000547395.1_1_12:49392421-49412044:+|nuORF	ENST00000547395.1_1_12:49392421-49412044:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.6405029296875	2	405.641471	809.268389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.13	1	112.16	111.66	112.66	0.032707								0	0	0	0.30784	1	13603	13603		14.664	2.4572	1				38728	13606	25769	25781	44131	44131					-0.14387481387655043
NPETITIL	8	Unmodified	_NPETITIL_					0	0	0		nc|ENSG00000107201|O95786-2|RIGI;ENSG00000107201|ENST00000379883|RIGI	nc|ENSG00000107201|O95786-2|RIGI	nc|ENSG00000107201|O95786-2|RIGI	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7544860839844	2	450.755475	899.496398	-1.264	-0.00056978	-1.5875	-0.00071559	-2.8516	-0.0012854	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.87922	1	7469	7469		31.955	1.4512	1	414240			38729	2335	25770	25782	44132	44132					0.04262962803340997
NPEVLKRHGK	10	Unmodified	_NPEVLKRHGK_					0	0	0		ENSG00000115904|ENST00000402219|SOS1	ENSG00000115904|ENST00000402219|SOS1	ENSG00000115904|ENST00000402219|SOS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3426513671875	2	589.343646	1176.67274	0.71715	0.00042265	-1.4797	-0.00087205	-0.76255	-0.0004494	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.70553	1	11067	11067		44.377	12.422	1	2439600			38730	2882	25771	25783	44133	44133					0.09147016757128767
NPEVRRAV	8	Unmodified	_NPEVRRAV_					0	0	0		ENSG00000109805|ENST00000251496|NCAPG	ENSG00000109805|ENST00000251496|NCAPG	ENSG00000109805|ENST00000251496|NCAPG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7695007324219	2	470.769783	939.525013	-0.46187	-0.00021743	-0.8461	-0.00039832	-1.308	-0.00061575	470.7692030231674	55.133	1.6853	55.107	54.397	56.082	-0.025955					109	47	3	0	0	0	0.90523	1	4985	4985		40.778	0	1	1657500			38731	2487	25772	25784	44134	44134					0.052831252231385406
NPFALESTIL	10	Unmodified	_NPFALESTIL_					0	0	0		ENSG00000106688|ENST00000262352|SLC1A1	ENSG00000106688|ENST00000262352|SLC1A1	ENSG00000106688|ENST00000262352|SLC1A1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.7993774414062	2	552.800414	1103.58628	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.256	1	76.346	75.846	76.846	0.089363								0	0	0	0.45132	1	7097	7097		44.377	3.599	1				38732	2314	25773	25785	44135	44135					0.03862592411928745
NPFEKGDLY	9	Unmodified	_NPFEKGDLY_					0	0	0		ENST00000569553.1_1_16:46992902-46993307:-|nuORF;ENSG00000069345|ENST00000317089|DNAJA2	ENST00000569553.1_1_16:46992902-46993307:-|nuORF	ENST00000569553.1_1_16:46992902-46993307:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.7614135742188	2	541.761289	1081.50803	-0.70138	-0.00037998	0.39376	0.00021332	-0.30762	-0.00016666	541.761525367463	52.153	0.81985	52.576	52.234	53.054	0.42348					27	19	2	0	0	0	0.14236	2	5215	5215;5228		85.161	16.374	1	1415200			38733	1218	25774	25786	44136;44137	44136					-0.029468401733083738
NPFEKGDLY	9	Unmodified	_NPFEKGDLY_					0	0	0		ENST00000569553.1_1_16:46992902-46993307:-|nuORF;ENSG00000069345|ENST00000317089|DNAJA2	ENST00000569553.1_1_16:46992902-46993307:-|nuORF	ENST00000569553.1_1_16:46992902-46993307:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.7615966796875	2	541.761289	1081.50803	-0.0037187	-2.0147E-06	0.50348	0.00027277	0.49976	0.00027075	541.761386790069	51.891	0.65078	52.558	52.23	52.881	0.6673					29	15	3	0	0	0	0.044173	1	5192	5192		110.12	45.913	1	1214000			38734	1218	25774	25786	44138	44138					-0.029468401733083738
NPFQAVQEDIR	11	Unmodified	_NPFQAVQEDIR_					0	0	0		nc|ENSG00000152208|O43424-2|GRID2	nc|ENSG00000152208|O43424-2|GRID2	nc|ENSG00000152208|O43424-2|GRID2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.5566101074219	3	439.557964	1315.65206	0.15693	6.8982E-05	-2.9978	-0.0013177	-2.8409	-0.0012487	439.5566148254639	22.028	0.43054	21.417	21.161	21.592	-0.6107					17	10	2	0	0	0	0.72892	1	858	858		26.75	2.5179	1	143300			38735	14995	25775	25787	44139	44139					0.006863815867973244
NPFSDPRQF	9	Unmodified	_NPFSDPRQF_					0	0	0		ENSG00000020633|ENST00000308873|RUNX3;nc|ENSG00000020633|Q13761-2|RUNX3	ENSG00000020633|ENST00000308873|RUNX3	ENSG00000020633|ENST00000308873|RUNX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2656860351562	2	554.26453	1106.51451	0.24267	0.0001345	0.47332	0.00026234	0.71599	0.00039685	554.264656119797	54.022	0.71062	54.429	54.111	54.822	0.40663					35	16	3	0	0	0	0.33718	1	5483	5483		62.107	1.9892	1	785520			38736	844	25776	25788	44140	44140					-0.03448902221953176
NPGANSCTA	9	Unmodified	_NPGANSCTA_					0	0	0		ENST00000530208.1_1_11:86014453-86017318:+|nuORF	ENST00000530208.1_1_11:86014453-86017318:+|nuORF	ENST00000530208.1_1_11:86014453-86017318:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.28948974609375	2	417.67416	833.333766	-1.8204	-0.00076032	2.3628	0.0009869	0.54247	0.00022658	417.67495008264376	75.216	0.49907	75.342	75.175	75.674	0.12545					11	12	2	0	0	0	0.20789	1	7004	7004		34.173	18.531	1	43434			38737	13342	25777	25789	44141	44141					-0.08956743870317041
NPGAQSPFH	9	Unmodified	_NPGAQSPFH_					0	0	0		ENST00000380599.8_1_17:7365097-7365262:-|nuORF	ENST00000380599.8_1_17:7365097-7365262:-|nuORF	ENST00000380599.8_1_17:7365097-7365262:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.7271728515625	2	477.725041	953.435529	2.1837	0.0010432	3.4051	0.0016267	5.5888	0.0026699	477.7265645950069	101.48	1.0107	101.78	101.5	102.52	0.29822					62	27	3	0	0	0	0.58668	1	12288	12288		47.657	3.5405	1	4071800			38738	10924	25778	25790	44142	44142					-0.043051294562360454
NPGDRLLL	8	Unmodified	_NPGDRLLL_					0	0	0			REV__ENSG00000105675|ENST00000262623|ATP4A	REV__ENSG00000105675|ENST00000262623|ATP4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2595520019531	2	449.261259	896.507966	0.47902	0.00021521	-2.0825	-0.00093559	-1.6035	-0.00072038	449.2601268412696	70.509	0.67209	70.638	70.305	70.977	0.12965					54	34	2	0	0	0	0.84341	1	6398	6398		24.203	2.2429	1	260720	+		38739	17561	25779	25791	44143	44143					0.05557204617343814
NPGICQTM	8	Unmodified	_NPGICQTM_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.2470703125	2	432.191131	862.367709	1.7103	0.00073919	-0.88464	-0.00038233	0.82569	0.00035686	432.1907403954308	98.272	0.57922	98.648	98.287	98.866	0.37679					20	13	2	0	0	0	0.4196	1	11832	11832		40.573	29.707	1	169420	+		38740	18464	25780	25792	44144	44144					-0.06898038702911435
NPGKKRGV	8	Unmodified	_NPGKKRGV_					0	0	0			REV__ENST00000297785.7_1_9:75524650-75527037:-|nuORF	REV__ENST00000297785.7_1_9:75524650-75527037:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.2615966796875	2	428.261594	854.508634	1.2297	0.00052665	-1.0776	-0.00046151	0.1521	6.5138E-05	428.26104076888095	90.552	2.3243	91.003	90.412	92.737	0.45058					198	55	5	0	0	0	0.84341	1	10781	10781		24.203	1.1603	1	32404000	+		38741	24727	25781	25793	44145	44145					0.07556044057048439
NPGKVGPKG	9	Unmodified	_NPGKVGPKG_					0	0	0		ENSG00000173369|ENST00000509305|C1QB;nc|ENSG00000173369|P02746|C1QB	ENSG00000173369|ENST00000509305|C1QB	ENSG00000173369|ENST00000509305|C1QB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.3025207519531	2	427.248152	852.481751	-0.61002	-0.00026063	1.3183	0.00056325	0.7083	0.00030262	427.2487406563934	73.165	0.16319	73.123	73.042	73.206	-0.042015					8	5	2	0	0	0	0.20789	1	7164	7164		27.882	3.6795	1	41700			38742	6852	25782	25794	44146	44146					0.04960935445865289
NPGKYKKKSH	10	Unmodified	_NPGKYKKKSH_					0	0	0		ENSG00000221978|ENST00000400809|CCNL2;ENST00000463260.5_1_1:1322613-1323455:-|nuORF;nc|ENSG00000221978|Q96S94-3|CCNL2;ENST00000482621.5_1_1:1322613-1328165:-|nuORF;ENST00000481223.6_1_1:1322613-1326370:-|nuORF	ENSG00000221978|ENST00000400809|CCNL2	ENSG00000221978|ENST00000400809|CCNL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	593.8213500976562	2	593.838197	1185.66184	-0.14096	-8.371E-05	2.2522	0.0013375	2.1113	0.0012538	594.3412365632777	78.861	0.21152	79.415	79.281	79.492	0.55396					6	4	2	0	0	0	0.37624	1	9031	9031		16.717	0.24424	1	68136			38743	8690	25783	25795	44147	44147					0.07643614382845954
NPGLLAHS	8	Unmodified	_NPGLLAHS_					0	0	0		ENST00000313863.10_2_17:56283353-56285296:-|nuORF	ENST00000313863.10_2_17:56283353-56285296:-|nuORF	ENST00000313863.10_2_17:56283353-56285296:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.717041015625	2	404.719227	807.423902	0.49648	0.00020093	-1.5241	-0.00061684	-1.0276	-0.0004159	404.7184769182728	74.42	0.59122	74.553	74.306	74.897	0.13207					27	19	2	0	0	0	0.884	1	6890	6890		33.516	0	1	61768			38744	9956	25784	25796	44148	44148					0.012486735204220167
NPGLLELWY	9	Unmodified	_NPGLLELWY_					0	0	0			REV__ENST00000508252.1_1_5:137463382-137465094:-|nuORF	REV__ENST00000508252.1_1_5:137463382-137465094:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.78955078125	2	552.78985	1103.56515	-1.1045	-0.00061054	0.89473	0.0004946	-0.20975	-0.00011595	552.7899581403892	73.535	1.3702	73.923	73.497	74.867	0.38779					94	35	4	0	0	0	0.034856	7	8246	8227;8236;8246;8257;8290;8302;8315		115.46	30.099	1	12398000	+		38745	17972	25785	25797	44149;44150;44151;44152;44153;44154;44155	44151					0.01750627103047009
NPGLLELWY	9	Unmodified	_NPGLLELWY_					0	0	0			REV__ENST00000508252.1_1_5:137463382-137465094:-|nuORF	REV__ENST00000508252.1_1_5:137463382-137465094:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7894897460938	2	552.78985	1103.56515	-0.07496	-4.1437E-05	0.28862	0.00015955	0.21366	0.00011811	552.7899670073601	73.384	1.516	73.938	73.561	75.077	0.55386					106	41	4	0	0	0	0.015327	5	8267	8237;8246;8256;8267;8275		128.86	22.446	1	13238000	+		38746	17972	25785	25797	44156;44157;44158;44159;44160	44159					0.01750627103047009
NPGLSLSH	8	Unmodified	_NPGLSLSH_					0	0	0		ENST00000373083.8_1_6:41303420-41303591:+|nuORF	ENST00000373083.8_1_6:41303420-41303591:+|nuORF	ENST00000373083.8_1_6:41303420-41303591:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.19366455078125	2	412.716685	823.418816	-0.082204	-3.3927E-05	-2.0979	-0.00086586	-2.1802	-0.00089979	412.71580777582227	78.917	0.63578	79.467	79.107	79.743	0.54945					22	14	2	0	0	0	0.4196	1	9030	9030		37.159	6.6555	1	88619			38747	10728	25786	25798	44161	44161					4.369657813185768E-05
NPGNPHNVY	9	Unmodified	_NPGNPHNVY_					0	0	0		nc|ENSG00000132471|Q969T9-2|WBP2;ENSG00000132471|ENST00000254806|WBP2;ENST00000587642.5_1_17:73842817-73843099:-|nuORF	nc|ENSG00000132471|Q969T9-2|WBP2	nc|ENSG00000132471|Q969T9-2|WBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.2393493652344	2	506.235773	1010.45699	-0.92769	-0.00046963	0.9518	0.00048183	0.024106	1.2204E-05	506.23599096356867	29.04	0.56355	29.011	28.736	29.3	-0.029207					27	12	3	0	0	0	0.31972	1	1805	1805		63.306	13.865	1	196190			38748	3799	25787	25799	44162	44162					-0.047817444275324306
NPGNPHNVY	9	Unmodified	_NPGNPHNVY_					0	0	0		nc|ENSG00000132471|Q969T9-2|WBP2;ENSG00000132471|ENST00000254806|WBP2;ENST00000587642.5_1_17:73842817-73843099:-|nuORF	nc|ENSG00000132471|Q969T9-2|WBP2	nc|ENSG00000132471|Q969T9-2|WBP2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	506.235773	1010.45699	1.3942	0.00070581	-1.5491	-0.0007842	-0.15485	-7.8392E-05	506.2348652144867	29.208	0.6033	29.034	28.717	29.32	-0.17336	0.011809	-0.0012228	NaN	63.306	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	233590			38749	3799	25787	25799							-0.047817444275324306
NPGQVYGC	8	Unmodified	_NPGQVYGC_					0	0	0		ENST00000372007.9_2_X:110339616-110346458:+|nuORF	ENST00000372007.9_2_X:110339616-110346458:+|nuORF	ENST00000372007.9_2_X:110339616-110346458:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1843566894531	2	419.18162	836.348688	2.0844	0.00087374	2.1028	0.00088145	4.1872	0.0017552	419.1826528067583	100.01	2.1606	100.34	99.379	101.54	0.33294					130	55	5	0	0	0	0.86791	2	12083	12083;12108		37.028	5.0736	1	8540100			38750	10683	25788	25800	44163;44164	44163					-0.07603252002309091
NPGQVYGC	8	Unmodified	_NPGQVYGC_					0	0	0		ENST00000372007.9_2_X:110339616-110346458:+|nuORF	ENST00000372007.9_2_X:110339616-110346458:+|nuORF	ENST00000372007.9_2_X:110339616-110346458:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1842956542969	2	419.18162	836.348688	2.1215	0.00088931	2.5221	0.0010572	4.6437	0.0019465	419.18264095568793	100	1.9591	100.35	99.506	101.46	0.34591					92	48	2	0	0	0	0.89457	1	12144	12144		37.028	10.232	1	9424600			38751	10683	25788	25800	44165	44165					-0.07603252002309091
NPHATEKKV	9	Unmodified	_NPHATEKKV_					0	0	0			REV__nc|ENSG00000162849|Q2KJY2-2|KIF26B	REV__nc|ENSG00000162849|Q2KJY2-2|KIF26B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.281494140625	2	512.282723	1022.55089	-1.5312	-0.00078441	-1.1667	-0.00059769	-2.6979	-0.0013821	512.2820384248688	86.195	3.9563	86.353	85.285	89.241	0.15851					164	92	2	0	0	0	0.78058	1	8525	8525		30.504	1.3336	1	356130	+		38752	15444	25789	25801	44166	44166					0.0405197467475773
NPHKMKALLV	10	Unmodified	_NPHKMKALLV_					0	0	0			REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8424072265625	2	575.841894	1149.66923	1.9391	0.0011166	-0.2647	-0.00015242	1.6745	0.00096422	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.8608	1	9894	9894		34.173	2.2177	1	5986700	+		38753	19285	25790	25802	44167	44167					0.10038630658914371
NPHKMKALLV	10	Unmodified	_NPHKMKALLV_					0	0	0			REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.843017578125	2	575.841894	1149.66923	0.91732	0.00052823	0.78637	0.00045282	1.7037	0.00098106	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.86718	1	9810	9810		27.882	1.0861	1	5468500	+		38754	19285	25790	25802	44168	44168					0.10038630658914371
NPHKMKALLV	10	Unmodified	_NPHKMKALLV_					0	0	0			REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8426513671875	2	575.841894	1149.66923	0.61103	0.00035186	1.1234	0.0006469	1.7344	0.00099876	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.6116	1	9442	9442		49.442	16.629	1	6623700	+		38755	19285	25790	25802	44169	44169					0.10038630658914371
NPHKMKALLV	10	Unmodified	_NPHKMKALLV_					0	0	0			REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8428955078125	2	575.841894	1149.66923	0.80402	0.00046299	0.89767	0.00051691	1.7017	0.0009799	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.86718	1	9349	9349		27.882	2.4321	1	6947200	+		38756	19285	25790	25802	44170	44170					0.10038630658914371
NPHLKNLYEGL	11	Unmodified	_NPHLKNLYEGL_					0	0	0		ENST00000509696.5_1_4:7062591-7066009:-|nuORF;ENSG00000109519|ENST00000264954|GRPEL1	ENST00000509696.5_1_4:7062591-7066009:-|nuORF	ENST00000509696.5_1_4:7062591-7066009:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	649.348876953125	2	649.348594	1296.68264	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.128	1	81.55	81.05	82.05	0.4215								0	0	0	0.56276	1	9340	9340		40.058	11.977	1				38757	2466	25791	25803	44171	44171					0.0461615997185163
NPHLLSHPS	9	Unmodified	_NPHLLSHPS_					0	0	0		nc|ENSG00000204577|O75022|LILRB3;nc|ENSG00000204577|O75022-3|LILRB3;nc|ENSG00000204577|O75022-2|LILRB3	nc|ENSG00000204577|O75022|LILRB3	nc|ENSG00000204577|O75022|LILRB3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.290283203125	2	501.261791	1000.50903	-0.51119	-0.00025624	-1.6173	-0.0008107	-2.1285	-0.0010669	501.26101015778534	83.859	1.373	84.024	83.449	84.822	0.16509					47	31	2	0	0	0	0.20789	1	8082	8082		29.15	0	1	73030			38758	15211	25792	25804	44172	44172					0.008794189862442181
NPHTRSKAPAL	11	Unmodified	_NPHTRSKAPAL_					0	0	0		ENST00000416671.5_1_22:29137938-29138193:-|nuORF	ENST00000416671.5_1_22:29137938-29138193:-|nuORF	ENST00000416671.5_1_22:29137938-29138193:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3325805664062	2	596.333279	1190.652	0.54724	0.00032634	-1.0354	-0.00061744	-0.48816	-0.00029111	596.3325172883492	95.985	3.4694	96.39	95.216	98.686	0.40451					232	84	4	0	0	0	0.66929	1	11530	11530		36.447	0	1	1225200			38759	11398	25793	25805	44173	44173					0.06430426377482945
NPIAKITSD	9	Unmodified	_NPIAKITSD_					0	0	0		ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.7636413574219	2	479.763832	957.513111	0.362	0.00017367	3.771	0.0018092	4.133	0.0019829	479.76554242222454	80.347	1.3373	80.767	80.171	81.508	0.41948					69	31	3	0	0	0	0.73802	1	9282	9282		37.812	5.8567	1	4919900			38760	3954	25794	25806	44174	44174					0.032654636892857525
NPICQVVK	8	Unmodified	_NPICQVVK_					0	0	0		ENST00000324288.12_1_16:11021589-11021871:+|nuORF	ENST00000324288.12_1_16:11021589-11021871:+|nuORF	ENST00000324288.12_1_16:11021589-11021871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.75457763671875	2	450.752213	899.489873	0.78549	0.00035406	3.5542	0.0016021	4.3397	0.0019561	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.87479	1	8086	8086		30.504	5.0535	1	420760			38761	10056	25795	25807	44175	44175					0.036107463709754484
NPIDHVSFY	9	Unmodified	_NPIDHVSFY_					0	0	0		ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.2587890625	2	546.261456	1090.50836	-1.5113	-0.00082559	-4.4802	-0.0024473	-5.9915	-0.0032729	546.2596201303288	59.665	1.0379	60.055	59.609	60.646	0.39077					64	26	3	0	0	0	0.0080651	3	6305	6293;6305;6317		134.81	44.034	1	2812900			38762	1934	25796	25808	44176;44177;44178	44177					-0.03327420453456398
NPIDHVSFY	9	Unmodified	_NPIDHVSFY_					0	0	0		ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2601928710938	2	546.261456	1090.50836	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.718	1	60.271	59.771	60.771	0.55323								0	0	0	0.011473	1	6322	6322		110.12	35.865	1				38763	1934	25796	25808	44179	44179					-0.03327420453456398
NPIDYNQA	8	Unmodified	_NPIDYNQA_					0	0	0			REV__ENST00000603395.1_1_7:56671114-56671243:+|nuORF	REV__ENST00000603395.1_1_7:56671114-56671243:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.7152404785156	2	467.716882	933.41921	0.51266	0.00023978	-3.3259	-0.0015556	-2.8132	-0.0013158	467.71522088082065	72.056	0.78386	72.186	71.901	72.685	0.1301					42	25	2	0	0	0	0.85277	1	6589	6589		25.45	0	1	143620	+		38764	23838	25797	25809	44180	44180					-0.05016255413011095
NPIIGVLL	8	Unmodified	_NPIIGVLL_					0	0	0		ENSG00000166439|ENST00000299563|RNF169	ENSG00000166439|ENST00000299563|RNF169	ENSG00000166439|ENST00000299563|RNF169	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7751159667969	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.82464	1	2898	2898		21.702	0	1	10440000			38765	6197	25798	25810	44181	44181					0.10712464770847419
NPIILPQDS	9	Unmodified	_NPIILPQDS_					0	0	0			REV__ENSG00000282757|ENST00000633875|DUXB	REV__ENSG00000282757|ENST00000633875|DUXB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.77081298828125	2	498.771657	995.528761	-0.3603	-0.00017971	-0.76939	-0.00038375	-1.1297	-0.00056346	498.77106434536984	107.59	0.67616	107.62	107.15	107.82	0.035622					41	15	4	0	0	0	0.77244	1	11823	11823		32.812	3.6629	1	861590	+		38766	24050	25799	25811	44182	44182					0.03081750206331435
NPIILPQDS	9	Unmodified	_NPIILPQDS_					0	0	0			REV__ENSG00000282757|ENST00000633875|DUXB	REV__ENSG00000282757|ENST00000633875|DUXB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.2139587402344	2	498.771657	995.528761	1.2836	0.00064021	-2.1045	-0.0010497	-0.82097	-0.00040948	498.7703703952141	104.6	1.3076	104.79	104.41	105.72	0.18887					49	33	2	0	0	0	0.20789	1	12720	12720		9.7057	0	1	103720	+		38767	24050	25799	25811	44183	44183					0.03081750206331435
NPIILPQDS	9	Unmodified	_NPIILPQDS_					0	0	0			REV__ENSG00000282757|ENST00000633875|DUXB	REV__ENSG00000282757|ENST00000633875|DUXB	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	498.771657	995.528761	-0.72412	-0.00036117	-0.15198	-7.5803E-05	-0.8761	-0.00043697	498.7714587975462	107.59	0.75272	107.59	106.98	107.73	0	-0.12389	0.0007815	NaN	32.812	44	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	621150	+		38768	24050	25799	25811							0.03081750206331435
NPIILPQDS	9	Unmodified	_NPIILPQDS_					0	0	0			REV__ENSG00000282757|ENST00000633875|DUXB	REV__ENSG00000282757|ENST00000633875|DUXB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	498.771657	995.528761	-0.51643	-0.00025758	-1.542	-0.00076912	-2.0585	-0.0010267	498.77080471405503	107.7	0.45294	107.83	107.44	107.89	0.13866	0.11668	-0.00060513	NaN	32.812	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	239240	+		38769	24050	25799	25811							0.03081750206331435
NPIILPQDS	9	Unmodified	_NPIILPQDS_					0	0	0			REV__ENSG00000282757|ENST00000633875|DUXB	REV__ENSG00000282757|ENST00000633875|DUXB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	498.771657	995.528761	0.80135	0.00039969	-2.3251	-0.0011597	-1.5237	-0.00075999	498.77045214359003	107.73	0.378	107.82	107.5	107.88	0.091255	0.1032	-0.0013863	NaN	32.812	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99617	+		38770	24050	25799	25811							0.03081750206331435
NPIMIWSQIV	10	Unmodified	_NPIMIWSQIV_					0	0	0			REV__ENST00000478830.1_1_3:108541759-108557851:+|nuORF	REV__ENST00000478830.1_1_3:108541759-108557851:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8243408203125	2	600.825909	1199.63727	-0.59314	-0.00035637	-1.7322	-0.0010407	-2.3253	-0.0013971	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.51302	1	6819	6819		54.776	7.119	1	825510	+		38771	27390	25800	25812	44184	44184					0.04543218185108344
NPIPFPETF	9	Unmodified	_NPIPFPETF_					0	0	0		ENSG00000212747|ENST00000391440|RTL8B;ENSG00000203950|ENST00000370775|RTL8A;ENSG00000134590|ENST00000257013|RTL8C;ENST00000522309.1_1_X:134185341-134186138:-|nuORF;ENST00000464369.1_1_X:134166413-134167211:+|nuORF;ENST00000495563.5_1_X:134166413-134167211:+|nuORF;ENST00000520964.1_1_X:134185341-134186186:-|nuORF	ENSG00000212747|ENST00000391440|RTL8B	ENSG00000212747|ENST00000391440|RTL8B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8165893554688	2	531.26875	1060.52295	0.5444	0.00028922	0.34665	0.00018417	0.89105	0.00047339	531.2686129800659	86.312	0.6084	86.755	86.49	87.099	0.44331					29	14	3	0	0	0	0.20789	1	10096	10096		39.253	18.306	1	260120			38772	3948	25801	25813	44185	44185					-0.004893483053592718
NPISGLLEY	9	Unmodified	_NPISGLLEY_					0	0	0		nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-2|ADAR;ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR;ENST00000463920.5_1_1:154573515-154574721:-|nuORF	nc|ENSG00000160710|P55265-3|ADAR	nc|ENSG00000160710|P55265-3|ADAR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.2658386230469	2	503.266207	1004.51786	-0.67115	-0.00033777	0.32336	0.00016274	-0.34779	-0.00017503	503.26628120976744	82.256	1.2526	82.682	82.197	83.45	0.42646					84	30	4	0	0	0	0.059135	1	9500	9500		104.06	10.861	1	3237000			38773	5600	25802	25814	44186	44186					0.01578347832048621
NPISGLLEY	9	Unmodified	_NPISGLLEY_					0	0	0		nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-2|ADAR;ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR;ENST00000463920.5_1_1:154573515-154574721:-|nuORF	nc|ENSG00000160710|P55265-3|ADAR	nc|ENSG00000160710|P55265-3|ADAR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.26611328125	2	503.266207	1004.51786	0.52455	0.00026399	-0.78711	-0.00039612	-0.26256	-0.00013214	503.26571816307285	82.213	1.4565	82.686	82.162	83.619	0.47383					87	35	4	0	0	0	0.057432	3	9553	9510;9539;9553		104.75	16.104	1	3929300			38774	5600	25802	25814	44187;44188;44189	44189					0.01578347832048621
NPISVYIGY	9	Unmodified	_NPISVYIGY_					0	0	0		nc|ENSG00000110079|Q96JQ5-2|MS4A4A;ENSG00000110079|ENST00000337908|MS4A4A	nc|ENSG00000110079|Q96JQ5-2|MS4A4A	nc|ENSG00000110079|Q96JQ5-2|MS4A4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.2693481445312	2	513.26875	1024.52295	0.17004	8.7279E-05	-0.1011	-5.1892E-05	0.068944	3.5387E-05	513.2685165138932	79.286	0.80822	79.697	79.311	80.119	0.41059					44	18	4	0	0	0	0.12652	1	9083	9083		87.754	19.27	1	480360			38775	2509	25803	25815	44190	44190					0.011666516946661432
NPISVYIGY	9	Unmodified	_NPISVYIGY_					0	0	0		nc|ENSG00000110079|Q96JQ5-2|MS4A4A;ENSG00000110079|ENST00000337908|MS4A4A	nc|ENSG00000110079|Q96JQ5-2|MS4A4A	nc|ENSG00000110079|Q96JQ5-2|MS4A4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.268798828125	2	513.26875	1024.52295	0.27431	0.00014079	-0.2275	-0.00011677	0.046803	2.4022E-05	513.2685557293674	79.165	0.93721	79.714	79.403	80.34	0.54945					42	21	3	0	0	0	0.10807	1	9092	9092		90.777	16.802	1	593480			38776	2509	25803	25815	44191	44191					0.011666516946661432
NPITLIKELI	10	Unmodified	_NPITLIKELI_					0	0	0			REV__nc|ENSG00000112282|Q9ULK4-6|MED23	REV__nc|ENSG00000112282|Q9ULK4-6|MED23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.3663940429688	2	577.363182	1152.71181	2.1383	0.0012346	4.0903	0.0023616	6.2285	0.0035961	577.3654203694961	102.01	1.0705	102.33	101.93	103.01	0.32511					73	24	4	0	0	0	0.86218	1	12409	12409		32.812	3.6629	1	1980600	+		38777	17935	25804	25816	44192	44192					0.14156304268158237
NPITPVKFVD	10	Unmodified	_NPITPVKFVD_					0	0	0		nc|ENSG00000165891|Q96AV8-2|E2F7;nc|ENSG00000165891|Q96AV8-3|E2F7;ENSG00000165891|ENST00000322886|E2F7;ENST00000551558.1_1_12:77439797-77459307:-|nuORF	nc|ENSG00000165891|Q96AV8-2|E2F7	nc|ENSG00000165891|Q96AV8-2|E2F7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.2842407226562	2	565.316232	1128.61791	0.53405	0.00030191	3.171	0.0017926	3.705	0.0020945	565.3179395920253	75.817	0.66766	76.386	76.142	76.81	0.56836					24	15	2	0	0	0	0.37624	1	8638	8638		23.523	7.8809	1	312640			38778	6132	25805	25817	44193	44193					0.0587458516586139
NPKATKIISAK	11	Unmodified	_NPKATKIISAK_					0	0	0		chr10:132202116-132203762|57|19.25|0.64|4.92|+|ENST00000368627|DPYSL4,DPYSL4;ENSG00000151640|ENST00000338492|DPYSL4	chr10:132202116-132203762|57|19.25|0.64|4.92|+|ENST00000368627|DPYSL4,DPYSL4	chr10:132202116-132203762|57|19.25|0.64|4.92|+|ENST00000368627|DPYSL4,DPYSL4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.8663940429688	2	585.86388	1169.71321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.566	1	26.226	25.726	26.726	-0.34035								0	0	0	0.56276	1	1477	1477		19.104	2.3861	1				38779	70	25806	25818	44194	44194					0.1351393835689123
NPKFGAHL	8	Unmodified	_NPKFGAHL_					0	0	0		nc|ENSG00000132470|P16144-4|ITGB4;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;ENSG00000132470|ENST00000200181|ITGB4	nc|ENSG00000132470|P16144-4|ITGB4	nc|ENSG00000132470|P16144-4|ITGB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2410583496094	2	442.24287	882.471186	-1.5813	-0.00069932	-2.7796	-0.0012293	-4.3609	-0.0019286	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.884	1	8047	8047		33.516	3.0119	1	968500			38780	3798	25807	25819	44195	44195					0.025249527914297687
NPKGLCVL	8	Carbamidomethyl (C)	_NPKGLC(Carbamidomethyl (C))VL_	NPKGLC(1)VL		NPKGLC(45)VL		0	1	0		ENSG00000141580|ENST00000392325|WDR45B;ENST00000573656.5_1_17:80576964-80583409:-|nuORF;ENST00000583470.1_1_17:30439049-30439436:-|nuORF	ENSG00000141580|ENST00000392325|WDR45B	ENSG00000141580|ENST00000392325|WDR45B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7538757324219	2	450.752213	899.489873	0.36741	0.00016561	4.3918	0.0019796	4.7592	0.0021452	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.9159	1	7885	7885		44.531	11.015	1	394230			38781	4517	25808	25820	44196	44196	60				0.0361074637096408
NPKKFAGLAS	10	Unmodified	_NPKKFAGLAS_					0	0	0		ENSG00000181381|ENST00000682922|DDX60L;ENST00000510590.1_1_4:169298892-169300981:-|nuORF	ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7933349609375	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.77314	1	8876	8876		40.778	1.5253	1	817800			38782	7384	25809	25821	44197	44197					0.061854491971644165
NPKKKKSSA	9	Unmodified	_NPKKKKSSA_					0	0	0			REV__ENST00000484437.1_1_3:44779222-44795794:-|nuORF	REV__ENST00000484437.1_1_3:44779222-44795794:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3007507324219	2	494.300916	986.587279	2.3073	0.0011405	-2.72	-0.0013445	-0.41277	-0.00020403	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.7932	1	10677	10677		25.574	0.12388	1	53958000	+		38783	20973	25810	25822	44198	44198					0.09344851571472645
NPKLPKVLN	9	Unmodified	_NPKLPKVLN_					0	0	0			REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF;REV__nc|ENSG00000197355|Q3KQV9-2|UAP1L1	REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.8201599121094	2	511.821484	1021.62842	0.084132	4.306E-05	-1.1749	-0.00060134	-1.0908	-0.00055828	511.82074825057515	79.493	0.72359	79.91	79.614	80.338	0.41621					50	16	4	0	0	0	0.58151	1	9094	9094		47.916	3.7988	1	1233800	+		38784	27310;23221	25811	25823	44199	44199					0.11846612610941065
NPKLPKVLN	9	Unmodified	_NPKLPKVLN_					0	0	0			REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF;REV__nc|ENSG00000197355|Q3KQV9-2|UAP1L1	REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.8201599121094	2	511.821484	1021.62842	0.0266	1.3614E-05	0.91702	0.00046935	0.94362	0.00048297	511.82085167974344	80.113	1.4832	80.529	79.572	81.055	0.41621					58	19	4	0	0	0	0.20789	1	9094	9094		47.916	17.412	1	488130	+		38785	27310;23221	25811	25823	44200	44200					0.11846612610941065
NPKLPKVLN	9	Unmodified	_NPKLPKVLN_					0	0	0			REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF;REV__nc|ENSG00000197355|Q3KQV9-2|UAP1L1	REV__ENST00000474787.1_1_9:139974466-139974655:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	511.821484	1021.62842	-1.3254	-0.00067838	-0.089258	-4.5684E-05	-1.4147	-0.00072407	511.82152803633693	80.689	1.0688	80.794	80.535	81.604	0.10526	0.15383	-0.00017013	NaN	47.916	38	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39930	+		38786	27310;23221	25811	25823							0.11846612610941065
NPKMRPTFL	9	Unmodified	_NPKMRPTFL_					0	0	0		nc|ENSG00000171105|P06213-2|INSR;ENSG00000171105|ENST00000302850|INSR	nc|ENSG00000171105|P06213-2|INSR	nc|ENSG00000171105|P06213-2|INSR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3064575195312	2	552.305144	1102.59573	0.78015	0.00043088	1.5185	0.00083868	2.2987	0.0012696	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.64922	1	9334	9334		44.117	8.4985	1	1841700			38787	6639	25812	25824	44201	44201					0.04854082216434108
NPKRKKYVK	9	Unmodified	_NPKRKKYVK_					0	0	0		ENSG00000134588|ENST00000511190|USP26	ENSG00000134588|ENST00000511190|USP26	ENSG00000134588|ENST00000511190|USP26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8660278320312	2	580.866757	1159.71896	-1.099	-0.0006384	-0.0099015	-5.7514E-06	-1.1089	-0.00064415	580.866642906103	78.68	1.2707	79.091	78.551	79.822	0.4106					73	29	3	0	0	0	0.78058	1	8962	8962		30.504	3.4563	1	1935400			38788	3947	25813	25825	44202	44202					0.14549081659220064
NPKSVLKRP	9	Unmodified	_NPKSVLKRP_					0	0	0		nc|ENSG00000155792|Q8TB45-2|DEPTOR;ENSG00000155792|ENST00000286234|DEPTOR	nc|ENSG00000155792|Q8TB45-2|DEPTOR	nc|ENSG00000155792|Q8TB45-2|DEPTOR	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.822998046875	2	519.824558	1037.63456	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.723	1	90.194	89.694	90.694	0.47068								0	0	0	0.30416	1	10640	10640		29.15	8.2026	1				38789	5341	25814	25826	44203	44203					0.11725130842478393
NPKVFKLH	8	Unmodified	_NPKVFKLH_					0	0	0		nc|ENSG00000158813|Q92838-9|EDA;nc|ENSG00000158813|Q92838-3|EDA;ENSG00000158813|ENST00000374552|EDA	nc|ENSG00000158813|Q92838-9|EDA	nc|ENSG00000158813|Q92838-9|EDA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7956237792969	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.80706	1	3870	3870		19.36	0	1	1240000			38790	5497	25815	25827	44204	44204					0.08446074267999393
NPKVKIPVG	9	Unmodified	_NPKVKIPVG_					0	0	0			REV__nc|ENSG00000129003|Q709C8-4|VPS13C	REV__nc|ENSG00000129003|Q709C8-4|VPS13C	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.31072998046875	2	476.302927	950.591301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.22	1	118.12	117.62	118.62	-0.10152								0	0	0	0.35896	1	14087	14087		12.207	2.7363	1		+		38791	18801	25816	25828	44205	44205					0.11402941065182404
NPLAHLVLFPT	11	Unmodified	_NPLAHLVLFPT_					0	0	0			REV__ENST00000494214.2_1_19:37085133-37085471:+|nuORF	REV__ENST00000494214.2_1_19:37085133-37085471:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3538208007812	2	611.353148	1220.69174	2.1766	0.0013307	2.4229	0.0014812	4.5995	0.0028119	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.69995	1	9878	9878		31.53	5.9558	1	5823000	+		38792	27711	25817	25829	44206	44206					0.09022553328168215
NPLEIGAH	8	Unmodified	_NPLEIGAH_					0	0	0			REV__ENST00000265334.8_1_5:133685967-133686021:-|nuORF	REV__ENST00000265334.8_1_5:133685967-133686021:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2576599121094	2	425.72451	849.434466	1.364	0.00058067	-0.2517	-0.00010715	1.1123	0.00047351	425.72416781876586	34.38	0.32924	34.685	34.447	34.776	0.30494					13	7	2	0	0	0	0.4196	1	2560	2560		42.474	11.971	1	81195	+		38793	24490	25818	25830	44207	44207					0.003726561748521817
NPLILTGKPI	10	Unmodified	_NPLILTGKPI_					0	0	0			REV__ENSG00000155016|ENST00000332884|CYP2U1	REV__ENSG00000155016|ENST00000332884|CYP2U1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.340087890625	2	533.336967	1064.65938	3.0971	0.0016518	2.9068	0.0015503	6.0039	0.0032021	533.3384140007198	99.339	2.8367	99.285	98.69	101.53	-0.053741					182	66	5	0	0	0	0.86471	1	10708	10708		30.318	2.2362	1	3163800	+		38794	20412	25819	25831	44208	44208					0.12963765925201187
NPLKVQTVIIL	11	Unmodified	_NPLKVQTVIIL_					0	0	0		nc|ENSG00000170088|Q8IY95-2|TMEM192;ENSG00000170088|ENST00000306480|TMEM192	nc|ENSG00000170088|Q8IY95-2|TMEM192	nc|ENSG00000170088|Q8IY95-2|TMEM192	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2671203613281	3	413.267463	1236.78056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.966	1	40.926	40.426	41.426	-0.04081								0	0	0	0.56276	1	3048	3048		21.032	2.5012	1				38795	6559	25820	25832	44209	44209					0.17163968567842858
NPLLAAIL	8	Unmodified	_NPLLAAIL_					0	0	0			REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|70|3|sense	REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|70|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2690734863281	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.86791	1	2703	2703		28.254	6.5519	1	2034000	+		38796	29437	25821	25833	44210	44210					0.09792178253815109
NPLLLGVV	8	Unmodified	_NPLLLGVV_					0	0	0			REV__ENSG00000144040|ENST00000272433|SFXN5	REV__ENSG00000144040|ENST00000272433|SFXN5	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76690673828125	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.057	1	49.057	48.557	49.557	0.00016785								0	0	0	0.29871	1	4115	4115		23.037	1.3344	1		+		38797	19868	25822	25834	44211	44211					0.09792178253815109
NPLLLPAPLA	10	Unmodified	_NPLLLPAPLA_					0	0	0			REV__ENST00000484738.1_1_1:244816912-244817122:+|nuORF	REV__ENST00000484738.1_1_1:244816912-244817122:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.80364990234375	2	509.81841	1017.62227	0.68514	0.0003493	-1.0076	-0.00051371	-0.3225	-0.00016442	509.8178509565716	86.786	0.4637	86.935	86.57	87.034	0.14902					14	10	2	0	0	0	0.37624	1	8564	8564		45.952	12.436	1	56962	+		38798	27515	25823	25835	44212	44212					0.11416094379410424
NPLPLLAS	8	Unmodified	_NPLPLLAS_					0	0	0			REV__nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4	REV__nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.74578857421875	2	412.747453	823.480354	-0.25099	-0.00010359	-2.4393	-0.0010068	-2.6903	-0.0011104	412.7462313332881	84.857	1.7729	85.304	84.713	86.486	0.44736					79	43	4	0	0	0	0.81548	1	9943	9943		20.482	0	1	1009400	+		38799	20236	25824	25836	44213	44213					0.061553013571028714
NPLPVATT	8	Unmodified	_NPLPVATT_					0	0	0		ENST00000491443.2_1_1:36432559-36439159:+|nuORF;ENSG00000126070|ENST00000373191|AGO3	ENST00000491443.2_1_1:36432559-36439159:+|nuORF	ENST00000491443.2_1_1:36432559-36439159:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.7286376953125	2	406.729261	811.443968	-1.8366	-0.00074698	-0.93352	-0.00037969	-2.7701	-0.0011267	406.7287979203731	76.234	2.0799	76.359	74.725	76.805	0.12485					97	60	2	0	0	0	0.80706	1	7148	7148		19.36	1.0356	1	145690			38800	3440	25825	25837	44214	44214					0.030704244603612096
NPLQKDPQY	9	Unmodified	_NPLQKDPQY_					0	0	0		nc|ENSG00000115685|Q15435-2|PPP1R7;ENSG00000115685|ENST00000234038|PPP1R7	nc|ENSG00000115685|Q15435-2|PPP1R7	nc|ENSG00000115685|Q15435-2|PPP1R7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.7799072265625	2	551.780013	1101.54547	-0.06654	-3.6716E-05	0.085399	4.7122E-05	0.018859	1.0406E-05	551.7799216302633	37.161	0.58001	37.474	37.206	37.786	0.31312					32	13	3	0	0	0	9.4194E-09	2	2961	2961;2974		163.15	78.235	1	754950			38801	2867	25826	25838	44215;44216	44215					-0.0012374890770843194
NPLQKDPQY	9	Unmodified	_NPLQKDPQY_					0	0	0		nc|ENSG00000115685|Q15435-2|PPP1R7;ENSG00000115685|ENST00000234038|PPP1R7	nc|ENSG00000115685|Q15435-2|PPP1R7	nc|ENSG00000115685|Q15435-2|PPP1R7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.7802124023438	2	551.780013	1101.54547	0.7877	0.00043464	-1.3677	-0.00075468	-0.58002	-0.00032004	551.7788280604209	37.027	0.91062	37.513	36.998	37.908	0.48581					38	21	3	0	0	0	0.051853	2	2967	2967;2981		107.01	31.036	1	787780			38802	2867	25826	25838	44217;44218	44217					-0.0012374890770843194
NPLQPVSIE	9	Unmodified	_NPLQPVSIE_					0	0	0		ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.7716064453125	2	498.771657	995.528761	1.4022	0.0006994	-2.2226	-0.0011086	-0.82032	-0.00040915	498.7703924385365	107.18	1.1359	107.28	106.73	107.87	0.10396					94	42	3	0	0	0	0.78058	1	13067	13067		30.504	1.3541	1	733090			38803	2388	25827	25839	44219	44219					0.03081750206331435
NPLRMRKY	8	Unmodified	_NPLRMRKY_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7850952148438	2	539.302936	1076.59132	-0.61463	-0.00033147	-0.030123	-1.6245E-05	-0.64475	-0.00034772	539.3026526000435	68.132	0.24978	68.68	68.534	68.784	0.54819					6	5	2	0	0	0	0.4196	1	7492	7492		40.573	19.626	1	78857	+		38804	18396	25828	25840	44220	44220					0.05608617793541271
NPLRRVTG	8	Unmodified	_NPLRRVTG_					0	0	0			REV__chr16:79700-83059|22|28.55|0.91|4.96|+|2|MPG,None|1	REV__chr16:79700-83059|22|28.55|0.91|4.96|+|2|MPG,None|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.77227783203125	2	456.772326	911.530098	-1.1318	-0.00051697	1.567	0.00071576	0.43521	0.00019879	456.7727770907754	90.264	1.662	90.264	89.603	91.265	0					93	38	4	0	0	0	0.86288	1	8768	8768		26.796	5.0938	1	669440	+		38805	15642	25829	25841	44221	44221					0.07079429085763422
NPLRRVTG	8	Unmodified	_NPLRRVTG_					0	0	0			REV__chr16:79700-83059|22|28.55|0.91|4.96|+|2|MPG,None|1	REV__chr16:79700-83059|22|28.55|0.91|4.96|+|2|MPG,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7730407714844	2	456.772326	911.530098	0.3199	0.00014612	0.78225	0.00035731	1.1022	0.00050343	456.77225319123676	89.732	0.87585	90.183	89.652	90.528	0.45058					36	23	4	0	0	0	0.86288	2	10593	10582;10593		44.117	8.4985	1	956160	+		38806	15642	25829	25841	44222;44223	44223					0.07079429085763422
NPLRRVTG	8	Unmodified	_NPLRRVTG_					0	0	0			REV__chr16:79700-83059|22|28.55|0.91|4.96|+|2|MPG,None|1	REV__chr16:79700-83059|22|28.55|0.91|4.96|+|2|MPG,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7730712890625	2	456.772326	911.530098	-1.5287	-0.00069828	1.2575	0.00057438	-0.27125	-0.0001239	456.77292963947184	89.845	2.4068	90.316	88.994	91.401	0.47068					69	60	2	0	0	0	0.90465	1	10644	10644		40.573	3.4135	1	1003600	+		38807	15642	25829	25841	44224	44224					0.07079429085763422
NPLSPVLL	8	Unmodified	_NPLSPVLL_					0	0	0			REV__ENSG00000125999|ENST00000253354|BPIFB1	REV__ENSG00000125999|ENST00000253354|BPIFB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3025207519531	2	426.763104	851.511654	0.41	0.00017497	3.3555	0.001432	3.7655	0.001607	426.7645577169914	63.372	1.0486	63.926	63.425	64.474	0.55449					32	24	2	0	0	0	0.4196	1	6783	6783		42.474	14.22	1	82491	+		38808	18689	25830	25842	44225	44225					0.07995874391190227
NPLTQIKM	8	Unmodified	_NPLTQIKM_					0	0	0			REV__nc|ENSG00000143514|Q13625-2|TP53BP2	REV__nc|ENSG00000143514|Q13625-2|TP53BP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7670593261719	2	472.76532	943.516088	-0.10807	-5.1094E-05	4.2312	0.0020003	4.1231	0.0019493	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.89962	1	8279	8279		38.806	1.647	1	501240	+		38809	19819	25831	25843	44226	44226					0.042070155424539735
NPLVGMGR	8	Unmodified	_NPLVGMGR_					0	0	0		ENST00000568229.5_1_15:74204592-74212261:-|nuORF	ENST00000568229.5_1_15:74204592-74212261:-|nuORF	ENST00000568229.5_1_15:74204592-74212261:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.22674560546875	2	422.228905	842.443257	-0.18819	-7.946E-05	-2.6251	-0.0011084	-2.8133	-0.0011879	422.22774658617425	61.684	0.88657	61.675	61.564	62.45	-0.0094147					63	38	2	0	0	0	0.86288	1	5741	5741		26.796	1.3459	1	445730			38810	13958	25832	25844	44227	44227					0.01573306539683017
NPLVGMGR	8	Unmodified	_NPLVGMGR_					0	0	0		ENST00000568229.5_1_15:74204592-74212261:-|nuORF	ENST00000568229.5_1_15:74204592-74212261:-|nuORF	ENST00000568229.5_1_15:74204592-74212261:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.22802734375	2	422.228905	842.443257	0.37497	0.00015832	-2.9256	-0.0012353	-2.5506	-0.0010769	422.2275511745807	61.057	0.65509	61.176	60.559	61.214	0.11901					42	27	2	0	0	0	0.86288	1	5316	5316		26.796	0.10319	1	337850			38811	13958	25832	25844	44228	44228					0.01573306539683017
NPLVGMGR	8	Unmodified	_NPLVGMGR_					0	0	0		ENST00000568229.5_1_15:74204592-74212261:-|nuORF	ENST00000568229.5_1_15:74204592-74212261:-|nuORF	ENST00000568229.5_1_15:74204592-74212261:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	422.228905	842.443257	-0.18824	-7.9482E-05	-2.2162	-0.00093576	-2.4045	-0.0010152	422.22805416222366	61.126	0.18594	61.113	60.988	61.174	-0.012199	-0.046454	0.0002323	NaN	26.796	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71117			38812	13958	25832	25844							0.01573306539683017
NPLVIVGL	8	Unmodified	_NPLVIVGL_					0	0	0		ENSG00000198734|ENST00000367797|F5	ENSG00000198734|ENST00000367797|F5	ENSG00000198734|ENST00000367797|F5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.766357421875	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.82464	1	2816	2816		21.702	0	1	681490			38813	8318	25833	25845	44229	44229					0.09792178253815109
NPLVYGYS	8	Unmodified	_NPLVYGYS_					0	0	0			REV__nc|ENSG00000171824|Q01780-2|EXOSC10	REV__nc|ENSG00000171824|Q01780-2|EXOSC10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7251892089844	2	456.726718	911.438883	-0.35137	-0.00016048	1.6022	0.00073177	1.2508	0.00057129	456.7273299077862	76.796	1.1861	77.196	76.868	78.054	0.3997					41	34	2	0	0	0	0.93529	1	8734	8734		52.299	6.3472	1	464610	+		38814	21774	25834	25846	44230	44230					-0.02037879402234921
NPNAGRKL	8	Unmodified	_NPNAGRKL_					0	0	0			REV__nc|ENSG00000230453|A2A2Z9|ANKRD18B	REV__nc|ENSG00000230453|A2A2Z9|ANKRD18B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516174316406	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.884	1	8198	8198		33.516	10.473	1	2823900	+		38815	15934	25835	25847	44231	44231					0.048394536773685104
NPNCNVLEVIK	11	Unmodified	_NPNCNVLEVIK_					0	0	0		ENST00000431718.5_1_2:173426973-173435530:+|nuORF;ENSG00000152256|ENST00000282077|PDK1;nc|ENSG00000152256|Q15118-2|PDK1	ENST00000431718.5_1_2:173426973-173435530:+|nuORF	ENST00000431718.5_1_2:173426973-173435530:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.8046875	2	621.82918	1241.64381	-0.22254	-0.00013838	-1.994	-0.00124	-2.2166	-0.0013783	621.8276831700277	56.654	0.60522	57.051	56.809	57.414	0.39672					22	13	2	0	0	0	0.17339	1	5896	5896		19.263	0	1	444120			38816	5165	25836	25848	44232	44232					0.03265111345808691
NPNEVKVN	8	Unmodified	_NPNEVKVN_					0	0	0		ENSG00000108370|ENST00000262406|RGS9;nc|ENSG00000108370|O75916-2|RGS9	ENSG00000108370|ENST00000262406|RGS9	ENSG00000108370|ENST00000262406|RGS9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26385498046875	2	457.240524	912.466495	-0.13181	-6.0267E-05	0.11647	5.3257E-05	-0.01533	-7.0097E-06	457.24010026203496	81.091	1.8694	81.155	80.261	82.13	0.064384					80	47	2	0	0	0	0.4196	1	8006	8006		45.952	31.288	1	142510			38817	2401	25837	25849	44233	44233					0.0067602385800000775
NPNRQIQIKK	10	Unmodified	_NPNRQIQIKK_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|74|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|74|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|74|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8687744140625	2	619.870028	1237.7255	-1.2246	-0.00075909	0.27155	0.00016833	-0.95304	-0.00059076	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.86718	1	9696	9696		27.882	1.8189	1	6224400			38818	14701	25838	25850	44234	44234					0.11614974819917734
NPPELIVGY	9	Unmodified	_NPPELIVGY_					0	0	0			REV__nc|ENSG00000091436|Q9NYL2-3|MAP3K20	REV__nc|ENSG00000091436|Q9NYL2-3|MAP3K20	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2904052734375	2	501.26875	1000.52295	0.82884	0.00041547	2.2853	0.0011456	3.1142	0.001561	501.26950299757993	84.419	0.26009	84.349	84.284	84.544	-0.069313					7	5	2	0	0	0	0.20789	1	8644	8644		38.806	4.6336	1	18965	+		38819	17013	25839	25851	44235	44235					0.022706516946641386
NPPGPPTVVKV	11	Unmodified	_NPPGPPTVVKV_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.8238525390625	2	552.824224	1103.63389	-1.0859	-0.00060033	1.3549	0.00074901	0.26894	0.00014868	552.8247634918083	77.88	0.86649	77.972	77.698	78.564	0.091438					80	32	4	0	0	0	0.45992	1	7278	7278		54.722	3.5297	1	542910			38820	5333	25840	25852	44236	44236					0.08622291402775772
NPPHIALLL	9	Unmodified	_NPPHIALLL_					0	0	0			REV__ENSG00000120008|ENST00000263461|WDR11	REV__ENSG00000120008|ENST00000263461|WDR11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3001403808594	2	494.302927	986.591301	-0.67308	-0.0003327	-3.3717	-0.0016666	-4.0448	-0.0019993	494.301277334812	103.42	1.1043	103.46	102.98	104.09	0.041481					59	26	3	0	0	0	0.7932	1	11224	11224		26.796	0.10319	1	522720	+		38821	18394	25841	25853	44237	44237					0.09746941065179726
NPPHIALLL	9	Unmodified	_NPPHIALLL_					0	0	0			REV__ENSG00000120008|ENST00000263461|WDR11	REV__ENSG00000120008|ENST00000263461|WDR11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.29925537109375	2	494.302927	986.591301	-1.6335	-0.00080746	-2.285	-0.0011295	-3.9185	-0.0019369	494.30173726769704	103.39	1.0146	103.5	103.11	104.12	0.11494					47	25	2	0	0	0	0.78058	1	10857	10857		30.504	2.6214	1	659110	+		38822	18394	25841	25853	44238	44238					0.09746941065179726
NPPKPILSDNG	11	Unmodified	_NPPKPILSDNG_					0	0	0			REV__ENSG00000153790|ENST00000283905|C7orf31	REV__ENSG00000153790|ENST00000283905|C7orf31	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8185424804688	2	576.306395	1150.59824	-1.2136	-0.00069941	1.5565	0.00089704	0.34293	0.00019763	576.3056902704003	87.011	0.12306	87.465	87.385	87.508	0.4543					4	2	2	0	0	0	0.17347	1	10235	10235		36.447	1.246	1	39561	+		38823	20356	25842	25854	44239	44239					0.02896209155096585
NPPLPVQH	8	Unmodified	_NPPLPVQH_					0	0	0			REV__ENST00000467731.1_1_21:33057290-33073360:-|nuORF	REV__ENST00000467731.1_1_21:33057290-33073360:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.248046875	2	451.248152	900.481751	-0.10221	-4.6121E-05	1.3002	0.00058673	1.198	0.00054061	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.85277	1	6412	6412		25.45	0	1	178200	+		38824	20481	25843	25855	44240	44240					0.02752935445857929
NPPPKPKPMK	10	Unmodified	_NPPPKPKPMK_					0	0	0			REV__ENST00000326298.8_1_6:99991433-99997239:-|nuORF	REV__ENST00000326298.8_1_6:99991433-99997239:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.32958984375	2	567.328619	1132.64269	1.497	0.00084932	0.52822	0.00029968	2.0253	0.001149	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.8651	1	9947	9947		25.574	2.5316	1	15259000	+		38825	17930	25844	25856	44241	44241					0.08166941767581193
NPPPPFIQGPK	11	Unmodified	_NPPPPFIQGPK_					0	0	0		ENSG00000144119|ENST00000272520|C1QL2	ENSG00000144119|ENST00000272520|C1QL2	ENSG00000144119|ENST00000272520|C1QL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.3331298828125	2	596.329673	1190.64479	0.92115	0.00054931	4.4733	0.0026676	5.3945	0.0032169	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.66929	1	9959	9959		36.447	6.129	1	1402200			38826	4690	25845	25857	44242	44242					0.0570969377702113
NPPPRVKAS	9	Unmodified	_NPPPRVKAS_					0	0	0		ENST00000329565.5_1_16:11770979-11771057:+|nuORF	ENST00000329565.5_1_16:11770979-11771057:+|nuORF	ENST00000329565.5_1_16:11770979-11771057:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.2781677246094	2	483.279983	964.545414	-0.75516	-0.00036495	-1.8052	-0.00087241	-2.5603	-0.0012374	483.279136890224	95.035	1.9592	95.266	94.736	96.695	0.23103					115	46	3	0	0	0	0.78983	1	9836	9836		27.882	5.9224	1	1458300			38827	10103	25846	25858	44243	44243					0.06172295882936396
NPPPVLLLGTV	11	Unmodified	_NPPPVLLLGTV_					0	0	0		ENST00000603865.1_1_11:75507249-75507624:+|nuORF	ENST00000603865.1_1_11:75507249-75507624:+|nuORF	ENST00000603865.1_1_11:75507249-75507624:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3405151367188	2	560.342249	1118.66995	-1.1295	-0.0006329	-2.0375	-0.0011417	-3.167	-0.0017746	560.3409488719506	105.9	1.7299	105.88	105.23	106.96	-0.025146					94	40	4	0	0	0	0.69995	1	11383	11383		31.53	3.6476	1	1067400			38828	14423	25847	25859	44244	44244					0.11535748579603933
NPPRRQLKK	9	Unmodified	_NPPRRQLKK_					0	0	0		nc|ENSG00000101109|Q13043-2|STK4;ENSG00000101109|ENST00000372806|STK4;ENST00000488618.1_1_20:43595209-43600800:+|nuORF;ENST00000480745.5_1_20:43595209-43601992:+|nuORF	nc|ENSG00000101109|Q13043-2|STK4	nc|ENSG00000101109|Q13043-2|STK4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8543701171875	2	568.854181	1135.69381	-0.36185	-0.00020584	-1.2386	-0.0007046	-1.6005	-0.00091044	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.47272	2	10626	10568;10626		53.351	14.545	1	34546000			38829	1898	25848	25860	44245;44246	44246					0.1313902685665198
NPPRRQLKK	9	Unmodified	_NPPRRQLKK_					0	0	0		nc|ENSG00000101109|Q13043-2|STK4;ENSG00000101109|ENST00000372806|STK4;ENST00000488618.1_1_20:43595209-43600800:+|nuORF;ENST00000480745.5_1_20:43595209-43601992:+|nuORF	nc|ENSG00000101109|Q13043-2|STK4	nc|ENSG00000101109|Q13043-2|STK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8533325195312	2	568.854181	1135.69381	-1.1637	-0.000662	-0.61846	-0.00035181	-1.7822	-0.0010138	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.74721	2	10951	10951;11128		37.159	8.5438	1	50786000			38830	1898	25848	25860	44247;44248	44247					0.1313902685665198
NPPRRQLKK	9	Unmodified	_NPPRRQLKK_					0	0	0		nc|ENSG00000101109|Q13043-2|STK4;ENSG00000101109|ENST00000372806|STK4;ENST00000488618.1_1_20:43595209-43600800:+|nuORF;ENST00000480745.5_1_20:43595209-43601992:+|nuORF	nc|ENSG00000101109|Q13043-2|STK4	nc|ENSG00000101109|Q13043-2|STK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.85302734375	2	568.854181	1135.69381	-1.3907	-0.00079112	-0.55616	-0.00031637	-1.9469	-0.0011075	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.62081	1	10700	10700		45.952	6.6991	1	72465000			38831	1898	25848	25860	44249	44249					0.1313902685665198
NPPSLIGGG	9	Unmodified	_NPPSLIGGG_					0	0	0			REV__ENST00000403681.6_2_12:66218404-66218671:+|nuORF	REV__ENST00000403681.6_2_12:66218404-66218671:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.24847412109375	2	406.21906	810.423567	-1.8139	-0.00073686	3.7646	0.0015292	1.9506	0.00079239	406.22041824620146	88.339	1.3221	88.546	87.763	89.085	0.2073					40	31	2	0	0	0	0.20789	1	8813	8813		38.806	0	1	227900	+		38832	26279	25849	25861	44250	44250					0.01077253800588096
NPPSPILRAGR	11	Unmodified	_NPPSPILRAGR_					0	0	0			REV__ENST00000427845.5_1_3:184033190-184033298:+|nuORF	REV__ENST00000427845.5_1_3:184033190-184033298:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3438110351562	2	589.343646	1176.67274	-0.36759	-0.00021664	-0.80413	-0.00047391	-1.1717	-0.00069055	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.62614	1	9689	9689		41.427	4.9799	1	11103000	+		38833	26573	25850	25862	44251	44251					0.09147016757151505
NPPSPILRAGR	11	Unmodified	_NPPSPILRAGR_					0	0	0			REV__ENST00000427845.5_1_3:184033190-184033298:+|nuORF	REV__ENST00000427845.5_1_3:184033190-184033298:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3424072265625	2	589.343646	1176.67274	-0.67475	-0.00039766	-0.80911	-0.00047684	-1.4839	-0.0008745	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.68532	1	9690	9690		33.922	8.3476	1	5429300	+		38834	26573	25850	25862	44252	44252					0.09147016757151505
NPPSPILRAGR	11	Unmodified	_NPPSPILRAGR_					0	0	0			REV__ENST00000427845.5_1_3:184033190-184033298:+|nuORF	REV__ENST00000427845.5_1_3:184033190-184033298:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.34326171875	2	589.343646	1176.67274	2.472	0.0014569	-3.7901	-0.0022337	-1.3181	-0.00077681	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.50531	2	10302	10290;10302		51.528	16.376	1	16740000	+		38835	26573	25850	25862	44253;44254	44254					0.09147016757151505
NPPSPILRAGR	11	Unmodified	_NPPSPILRAGR_					0	0	0			REV__ENST00000427845.5_1_3:184033190-184033298:+|nuORF	REV__ENST00000427845.5_1_3:184033190-184033298:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.342529296875	2	589.343646	1176.67274	0.71715	0.00042265	-1.4797	-0.00087205	-0.76255	-0.0004494	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.62614	1	11042	11042		41.427	4.9799	1	2439600	+		38836	26573	25850	25862	44255	44255					0.09147016757151505
NPPTASIYY	9	Unmodified	_NPPTASIYY_					0	0	0			REV__ENSG00000099617|ENST00000215368|EFNA2	REV__ENSG00000099617|ENST00000215368|EFNA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.24951171875	2	513.250557	1024.48656	0.20601	0.00010573	-0.25456	-0.00013065	-0.048553	-2.492E-05	513.2504117971379	71.021	0.94449	71.568	71.166	72.11	0.54756					58	22	4	0	0	0	0.55097	1	7901	7901		49.442	0	1	938560	+		38837	17096	25851	25863	44256	44256					-0.024702252020460946
NPPVFTRA	8	Unmodified	_NPPVFTRA_					0	0	0		ENSG00000166341|ENST00000299441|DCHS1	ENSG00000166341|ENST00000299441|DCHS1	ENSG00000166341|ENST00000299441|DCHS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2485656738281	2	451.248152	900.481751	-1.5029	-0.0006782	3.2139	0.0014503	1.711	0.00077208	451.24948444631724	65.955	1.2112	65.955	65.412	66.623	0					127	65	2	0	0	0	0.87922	1	5810	5810		31.955	3.7006	1	815400			38838	6180	25852	25864	44257	44257					0.027529354458465605
NPPVNIDAD	9	Unmodified	_NPPVNIDAD_					0	0	0		nc|ENSG856|P87889|ERVK-10_gag;nc|ENSG816|P62685|ERVK-8_gag;nc|ENSG846|Q9YNA8|ERVK-19_gag;nc|ENSG838|P63145|ERVK-24_gag;nc|ENSG827|Q7LDI9|ERVK-6_gag;nc|ENSG820|P63130|ERVK-7_gag;nc|ENSG800|P62684|HERVK_113_gag;nc|ENSG810|P63126|ERVK-9_gag;nc|ENSG809|P63128|ERVK-9_pol;nc|ENSG841|P62683|ERVK-21_gag	nc|ENSG856|P87889|ERVK-10_gag;nc|ENSG810|P63126|ERVK-9_gag;nc|ENSG841|P62683|ERVK-21_gag	nc|ENSG841|P62683|ERVK-21_gag	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	477.7286376953125	2	477.729989	953.445425	0.75595	0.00036114	-3.5545	-0.0016981	-2.7985	-0.0013369	477.7281767160498	97.974	1.0146	98.134	97.668	98.683	0.16073					48	22	3	0	0	0	0.72402	1	10168	10168		38.806	3.6541	1	430400			38839	15364;15360;15363	25853	25865	44258	44258					-0.033159862415232055
NPPVYVRL	8	Unmodified	_NPPVYVRL_					0	0	0			REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	REV__nc|ENSG00000143341|Q96RW7-2|HMCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2776184082031	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.91005	1	8630	8630		42.474	8.9589	1	7438100	+		38840	19793	25854	25866	44259	44259					0.0643408151404401
NPQRWRCSL	9	Unmodified	_NPQRWRCSL_					0	0	0		chr18:63828397-63891436|16|257.0|0.04|12.75|+|2|TE_info:MSTA,MSTA_dup18145,ERVL-MaLR,LTR,donor,+,63828065,63828397|None,SERPINB2|3	chr18:63828397-63891436|16|257.0|0.04|12.75|+|2|TE_info:MSTA,MSTA_dup18145,ERVL-MaLR,LTR,donor,+,63828065,63828397|None,SERPINB2|3	chr18:63828397-63891436|16|257.0|0.04|12.75|+|2|TE_info:MSTA,MSTA_dup18145,ERVL-MaLR,LTR,donor,+,63828065,63828397|None,SERPINB2|3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.7549438476562	2	580.293099	1158.57165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.266	1	78.393	77.893	78.893	0.12695								0	0	0	0.30778	1	7374	7374		27.882	2.3082	1				38841	257	25855	25867	44260	44260					-0.0012975821723557601
NPRAGHSA	8	Unmodified	_NPRAGHSA_					0	0	0		ENST00000355624.7_1_10:119805573-119805648:-|nuORF	ENST00000355624.7_1_10:119805573-119805648:-|nuORF	ENST00000355624.7_1_10:119805573-119805648:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.20269775390625	2	405.204276	808.393999	0.52684	0.00021348	0.86096	0.00034886	1.3878	0.00056234	405.20454904166456	77.549	2.3576	77.686	77.044	79.402	0.13667					120	85	3	0	0	0	0.884	1	7304	7304		33.516	5.2613	1	116860			38842	10354	25856	25868	44261	44261					-0.017862654249142906
NPRDCTRSE	9	Unmodified	_NPRDCTRSE_					0	0	0			REV__ENSG00000101230|ENST00000262487|ISM1	REV__ENSG00000101230|ENST00000262487|ISM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.2417602539062	2	539.240729	1076.46691	0.48952	0.00026397	2.4344	0.0013127	2.9239	0.0015767	539.2418908615597	61.858	0.64476	61.978	61.607	62.252	0.11957					47	27	2	0	0	0	0.43338	1	5390	5390		55.504	0.72789	1	434680	+		38843	17259	25857	25869	44262	44262					-0.0682692448447142
NPRGKNSK	8	Unmodified	_NPRGKNSK_					0	0	0		nc|ENSG00000154678|Q14123-2|PDE1C;ENSG00000154678|ENST00000396191|PDE1C;nc|ENSG00000154678|Q14123-3|PDE1C	nc|ENSG00000154678|Q14123-2|PDE1C	nc|ENSG00000154678|Q14123-2|PDE1C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7568359375	2	450.754133	899.493713	0.58167	0.00026219	-0.53401	-0.00024071	0.047657	2.1482E-05	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.90523	1	7856	7856		40.778	0	1	285810			38844	5288	25858	25870	44263	44263					0.03994552189033129
NPRINWNPP	9	Unmodified	_NPRINWNPP_					0	0	0			REV__ENSG00000164366|ENST00000296824|CCDC127	REV__ENSG00000164366|ENST00000296824|CCDC127	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.288818359375	2	554.28834	1106.56213	-1.3781	-0.00076384	1.3053	0.00072351	-0.072766	-4.0333E-05	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.77546	1	2433	2433		31.955	4.0726	1	328550	+		38845	21077	25859	25871	44264	44264					0.013107967688711142
NPRPRQLR	8	Unmodified	_NPRPRQLR_					0	0	0			REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.810546875	2	518.809774	1035.60499	1.9509	0.0010121	-1.0415	-0.00054036	0.90933	0.00047177	518.8092395464859	98.349	1.5218	98.712	98.319	99.841	0.36308					101	37	4	0	0	0	0.89962	1	11942	11942		38.806	1.647	1	12004000	+		38846	19963	25860	25872	44265	44265					0.08861611616976006
NPRRERRGSR	10	Unmodified	_NPRRERRGSR_					0	0	0			REV__chr4:70603921-70606185|25|148.92|0.13|10.19|+|2|AMBN,AMBN|1	REV__chr4:70603921-70606185|25|148.92|0.13|10.19|+|2|AMBN,AMBN|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3672485351562	2	642.361225	1282.7079	-0.042196	-2.7105E-05	2.6931	0.00173	2.6509	0.0017029	642.3635952564791	110.33	1.0043	110.28	110.08	111.09	-0.055077					98	36	3	0	0	0	0.86218	1	12058	12058		32.812	1.2826	1	348750	+		38847	15836	25861	25873	44266	44266					0.077850723376514
NPRRKPRP	8	Unmodified	_NPRRKPRP_					0	0	0		chr14:23970332-23982495|37|53.43|0.78|6.1|+|1|TE_info:L1PA7,L1PA7_dup11225,L1,LINE,acceptor,+,23982495,23984046|DHRS4L2,None|10	chr14:23970332-23982495|37|53.43|0.78|6.1|+|1|TE_info:L1PA7,L1PA7_dup11225,L1,LINE,acceptor,+,23982495,23984046|DHRS4L2,None|10	chr14:23970332-23982495|37|53.43|0.78|6.1|+|1|TE_info:L1PA7,L1PA7_dup11225,L1,LINE,acceptor,+,23982495,23984046|DHRS4L2,None|10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.81280517578125	2	510.812316	1019.61008	2.0738	0.0010593	-0.775	-0.00039588	1.2988	0.00066345	510.811728357041	106.1	0.82207	106.22	105.9	106.72	0.12742					79	35	3	0	0	0	0.86288	1	12924	12924		26.796	1.3459	1	1055000			38848	163	25862	25874	44267	44267					0.10105915479596206
NPRSIRTG	8	Unmodified	_NPRSIRTG_					0	0	0			REV__nc|ENSG00000106772|Q8WUY3-4|PRUNE2	REV__nc|ENSG00000106772|Q8WUY3-4|PRUNE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7592468261719	2	450.754133	899.493713	-1.264	-0.00056978	1.3912	0.00062708	0.12712	5.7301E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.86677	1	7866	7866		27.882	1.0861	1	414240	+		38849	17628	25863	25875	44268	44268					0.03994552189044498
NPRWRRWLLMR	11	Unmodified	_NPRWRRWLLMR_					0	0	0		ENST00000579248.5_2_18:47017953-47018809:-|nuORF	ENST00000579248.5_2_18:47017953-47018809:-|nuORF	ENST00000579248.5_2_18:47017953-47018809:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7638549804688	3	528.633256	1582.87794	0.45125	0.00023855	1.3358	0.00070614	1.787	0.00094468	528.6339733997895	17.168	0.27273	16.558	16.386	16.659	-0.6107					8	5	2	0	0	0	0.18372	1	229	229		3.4087	0	1	23584			38850	14086	25864	25876	44269	44269					0.10981472015691907
NPSFRVKH	8	Unmodified	_NPSFRVKH_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.7712707519531	2	492.772326	983.530098	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.437	1	72.479	71.979	72.979	0.042114								0	0	0	0.29344	1	6969	6969		31.955	2.8053	1		+		38851	18092	25865	25877	44270	44270					0.03767429085758067
NPSKLPSIAIK	11	Unmodified	_NPSKLPSIAIK_					0	0	0			REV__nc|ENSG00000189308|Q6MZP7-3|LIN54	REV__nc|ENSG00000189308|Q6MZP7-3|LIN54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	584.3563232421875	2	584.358431	1166.70231	-1.3402	-0.00078317	-2.8317	-0.0016547	-4.1719	-0.0024379	584.3568464329793	92.429	3.0691	92.615	91.162	94.231	0.18582					184	72	3	0	0	0	0.7144	1	9234	9234		29.17	5.6474	1	728420	+		38852	23077	25866	25878	44271	44271					0.12562535982578993
NPSPRALF	8	Unmodified	_NPSPRALF_					0	0	0			REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.2478942871094	2	451.248152	900.481751	0.4571	0.00020627	0.75976	0.00034284	1.2169	0.00054911	451.2483516516998	67.877	1.2398	68.005	67.282	68.522	0.12748					79	46	2	0	0	0	0.87479	1	6053	6053		30.504	7.4612	1	170990	+		38853	24556	25867	25879	44272	44272					0.02752935445857929
NPSSLCSPSKG	11	Unmodified	_NPSSLCSPSKG_					0	0	0		ENST00000418342.5_1_1:23414539-23414800:-|nuORF	ENST00000418342.5_1_1:23414539-23414800:-|nuORF	ENST00000418342.5_1_1:23414539-23414800:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.7529296875	2	538.755681	1075.49681	0.88954	0.00047924	-4.2044	-0.0022651	-3.3148	-0.0017859	538.7532357321447	24.485	0.63689	24.442	24.195	24.832	-0.043221					18	13	2	0	0	0	0.67041	1	897	897		36.318	2.1451	1	32359			38854	11421	25868	25880	44273	44273					-0.037919855391237434
NPSWTTSP	8	Unmodified	_NPSWTTSP_					0	0	0			REV__ENSG00000139218|ENST00000369367|SCAF11	REV__ENSG00000139218|ENST00000369367|SCAF11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	445.6359558105469	2	445.20615	888.397747	-1.3548	-0.00060316	1.5435	0.00068716	0.18869	8.4005E-05	445.2066118804654	39.937	0.42835	39.893	39.579	40.008	-0.043694					12	9	2	0	0	0	0.4196	1	2871	2871		38.806	0	1	45259	+		38855	19525	25869	25881	44274	44274					-0.05091640441719392
NPSWTTSP	8	Unmodified	_NPSWTTSP_					0	0	0			REV__ENSG00000139218|ENST00000369367|SCAF11	REV__ENSG00000139218|ENST00000369367|SCAF11	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	445.20615	888.397747	-0.56641	-0.00025217	0.82992	0.00036949	0.26351	0.00011732	445.2065342809458	39.861	0.42911	39.871	39.601	40.03	0.0092812	-0.011303	-0.00029009	NaN	38.806	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29952	+		38856	19525	25869	25881							-0.05091640441719392
NPTAEIPP	8	Unmodified	_NPTAEIPP_					0	0	0		nc|ENSG00000160584|Q9Y2K2-8|SIK3;ENSG00000160584|ENST00000445177|SIK3;ENST00000480222.1_1_11:116738660-116744319:-|nuORF	nc|ENSG00000160584|Q9Y2K2-8|SIK3	nc|ENSG00000160584|Q9Y2K2-8|SIK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7178955078125	2	419.718893	837.423233	1.6798	0.00070504	-2.4337	-0.0010215	-0.75393	-0.00031644	419.71778611541424	43.542	1.0507	43.54	43.239	44.289	-0.002449					50	25	3	0	0	0	0.91977	1	3392	3392		45.952	5.3793	1	281930			38857	5594	25870	25882	44275	44275					-0.0019816591928929483
NPTAEIPP	8	Unmodified	_NPTAEIPP_					0	0	0		nc|ENSG00000160584|Q9Y2K2-8|SIK3;ENSG00000160584|ENST00000445177|SIK3;ENST00000480222.1_1_11:116738660-116744319:-|nuORF	nc|ENSG00000160584|Q9Y2K2-8|SIK3	nc|ENSG00000160584|Q9Y2K2-8|SIK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7197265625	2	419.718893	837.423233	-0.30679	-0.00012876	0.071293	2.9923E-05	-0.23549	-9.8841E-05	419.71878265740355	43.537	1.2327	43.487	43.018	44.25	-0.050308					64	29	3	0	0	0	0.89043	1	3073	3073		35.618	2.1027	1	823700			38858	5594	25870	25882	44276	44276					-0.0019816591928929483
NPTDDSWKG	9	Unmodified	_NPTDDSWKG_					0	0	0		ENSG00000124198|ENST00000371917|ARFGEF2	ENSG00000124198|ENST00000371917|ARFGEF2	ENSG00000124198|ENST00000371917|ARFGEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.22283935546875	2	510.225071	1018.43559	-0.58544	-0.00029871	-3.543	-0.0018077	-4.1285	-0.0021064	510.22321540791023	88.543	1.4016	89.014	88.32	89.721	0.47068					100	34	5	0	0	0	0.76764	1	10453	10453		34.173	0.65696	1	3237400			38859	3315	25871	25883	44277	44277					-0.07289174246898256
NPTHEQEPK	9	Unmodified	_NPTHEQEPK_					0	0	0			REV__ENSG00000103994|ENST00000564754|ZNF106	REV__ENSG00000103994|ENST00000564754|ZNF106	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.2845458984375	2	540.259445	1078.50434	-0.1672	-9.0331E-05	0.3696	0.00019968	0.2024	0.00010935	540.7624077059794	68.888	0.25499	69.272	69.181	69.436	0.38416					6	5	2	0	0	0	0.20789	1	7608	7608		19.997	0	1	59242	+		38860	17431	25872	25884	44278	44278					-0.03177509947181534
NPTLLQLPLAA	11	Unmodified	_NPTLLQLPLAA_					0	0	0		ENST00000524317.1_1_11:9042594-9047435:-|nuORF	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8433227539062	2	575.845156	1149.67576	-0.49921	-0.00028747	-3.2743	-0.0018855	-3.7735	-0.002173	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.61369	2	8888	8816;8888		42.864	8.9426	1	1518700			38861	13215	25873	25885	44279;44280	44280					0.10690847091314026
NPTLLQLPLAA	11	Unmodified	_NPTLLQLPLAA_					0	0	0		ENST00000524317.1_1_11:9042594-9047435:-|nuORF	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.843017578125	2	575.845156	1149.67576	-0.46596	-0.00026832	-3.1419	-0.0018092	-3.6078	-0.0020776	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.66929	2	9134	9122;9134		36.447	1.2304	1	3411000			38862	13215	25873	25885	44281;44282	44282					0.10690847091314026
NPTLLQLPLAA	11	Unmodified	_NPTLLQLPLAA_					0	0	0		ENST00000524317.1_1_11:9042594-9047435:-|nuORF	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8426513671875	2	575.845156	1149.67576	-0.99734	-0.00057431	-2.9254	-0.0016846	-3.9227	-0.0022589	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.638	2	9456	9456;9610		40.058	4.7721	1	5638300			38863	13215	25873	25885	44283;44284	44283					0.10690847091314026
NPTLLQLPLAA	11	Unmodified	_NPTLLQLPLAA_					0	0	0		ENST00000524317.1_1_11:9042594-9047435:-|nuORF	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8433227539062	2	575.845156	1149.67576	0.60609	0.00034901	-4.3948	-0.0025308	-3.7888	-0.0021817	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.638	1	9072	9072		40.058	4.9061	1	2381900			38864	13215	25873	25885	44285	44285					0.10690847091314026
NPTLLQLPLAA	11	Unmodified	_NPTLLQLPLAA_					0	0	0		ENST00000524317.1_1_11:9042594-9047435:-|nuORF	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	ENST00000524317.1_1_11:9042594-9047435:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8423461914062	2	575.845156	1149.67576	-1.6501	-0.00095021	-2.5974	-0.0014957	-4.2475	-0.0024459	575.8434791868526	90.193	1.8473	90.663	90.18	92.028	0.47068					146	46	4	0	0	0	0.638	1	10740	10740		40.058	2.2467	1	1810000			38865	13215	25873	25885	44286	44286					0.10690847091314026
NPVFREKV	8	Unmodified	_NPVFREKV_					0	0	0		nc|ENSG00000139973|Q17RD7-2|SYT16;ENSG00000139973|ENST00000683842|SYT16	nc|ENSG00000139973|Q17RD7-2|SYT16	nc|ENSG00000139973|Q17RD7-2|SYT16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7806701660156	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.89962	1	8343	8343		38.806	0	1	385180			38866	4404	25874	25886	44287	44287					0.05589180025708629
NPVIICNK	8	Unmodified	_NPVIICNK_					0	0	0			REV__ENSG00000056050|ENST00000393381|HPF1	REV__ENSG00000056050|ENST00000393381|HPF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7552185058594	2	450.752213	899.489873	0.78549	0.00035406	3.5542	0.0016021	4.3397	0.0019561	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.884	1	8230	8230		33.516	1.5607	1	420760	+		38867	16416	25875	25887	44288	44288					0.0361074637096408
NPVPPEAKSP	10	Unmodified	_NPVPPEAKSP_					0	0	0		ENSG00000100368|ENST00000403662|CSF2RB;nc|ENSG00000100368|P32927-2|CSF2RB	ENSG00000100368|ENST00000403662|CSF2RB	ENSG00000100368|ENST00000403662|CSF2RB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8102416992188	2	518.277106	1034.53966	1.888	0.0009785	1.9141	0.00099201	3.802	0.0019705	518.2779925081373	97.574	0.45792	97.96	97.639	98.097	0.38548					17	10	2	0	0	0	0.37624	1	11741	11741		19.104	0	1	123220			38868	1835	25876	25888	44289	44289					0.023771525806068894
NPVRGRGG	8	Unmodified	_NPVRGRGG_					0	0	0			REV__ENST00000405486.5_2_22:41641775-41642279:-|nuORF	REV__ENST00000405486.5_2_22:41641775-41642279:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7285461425781	2	406.727918	811.441283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.762	1	75.809	75.309	76.309	0.046448								0	0	0	0.29353	1	7382	7382		28.254	2.8041	1		+		38869	26291	25877	25889	44290	44290					0.028020138460988164
NPVRGRGG	8	Unmodified	_NPVRGRGG_					0	0	0			REV__ENST00000405486.5_2_22:41641775-41642279:-|nuORF	REV__ENST00000405486.5_2_22:41641775-41642279:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.72869873046875	2	406.727918	811.441283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.613	1	76.661	76.161	77.161	0.047981								0	0	0	0.29353	1	7494	7494		28.254	1.4582	1		+		38870	26291	25877	25889	44291	44291					0.028020138460988164
NPVSLPPD	8	Unmodified	_NPVSLPPD_					0	0	0		ENST00000243776.10_1_2:220403755-220404097:-|nuORF	ENST00000243776.10_1_2:220403755-220404097:-|nuORF	ENST00000243776.10_1_2:220403755-220404097:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7160949707031	2	419.718893	837.423233	0.17461	7.3288E-05	-0.79184	-0.00033235	-0.61723	-0.00025906	419.7184802033485	43.588	1.0293	43.561	43.187	44.216	-0.026764					41	24	2	0	0	0	0.91472	1	3358	3358		44.117	5.3107	1	235560			38871	9261	25878	25890	44292	44292					-0.0019816591928929483
NPVSLPPD	8	Unmodified	_NPVSLPPD_					0	0	0		ENST00000243776.10_1_2:220403755-220404097:-|nuORF	ENST00000243776.10_1_2:220403755-220404097:-|nuORF	ENST00000243776.10_1_2:220403755-220404097:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7180480957031	2	419.718893	837.423233	-1.1151	-0.00046801	0.58547	0.00024573	-0.52959	-0.00022228	419.71903347482083	43.584	0.95621	43.548	43.145	44.101	-0.03582					46	22	3	0	0	0	0.9295	1	3406	3406		55.504	13.03	1	300650			38872	9261	25878	25890	44293	44293					-0.0019816591928929483
NPVSLQLDLD	10	Unmodified	_NPVSLQLDLD_					0	0	0		ENSG00000196878|ENST00000356082|LAMB3	ENSG00000196878|ENST00000356082|LAMB3	ENSG00000196878|ENST00000356082|LAMB3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	556.3065185546875	2	557.292953	1112.57135	1.3356	0.0007443	3.3357	0.001859	4.6713	0.0026033	557.2947234794292	90.528	1.2903	90.575	89.656	90.947	0.046448					57	30	2	0	0	0	0.37624	1	9351	9351		23.523	0	1	105430			38873	8111	25879	25891	44294	44294					0.01957100543904744
NPVSWVQTF	9	Unmodified	_NPVSWVQTF_					0	0	0		nc|ENSG00000131504|O60610-2|DIAPH1;nc|ENSG00000131504|O60610-3|DIAPH1;ENSG00000131504|ENST00000389054|DIAPH1	nc|ENSG00000131504|O60610-2|DIAPH1	nc|ENSG00000131504|O60610-2|DIAPH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.2709350585938	2	539.271824	1076.5291	-0.35941	-0.00019382	0.26726	0.00014413	-0.09215	-4.9694E-05	539.2718748606806	82.466	0.82509	82.94	82.631	83.456	0.47383					31	19	2	0	0	0	0.066118	2	9582	9570;9582		101.25	27.247	1	819380			38874	14917	25880	25892	44295;44296	44296					-0.006108300738333128
NPVTKFRL	8	Unmodified	_NPVTKFRL_					0	0	0		ENST00000264501.8_2_4:123270613-123270754:+|nuORF	ENST00000264501.8_2_4:123270613-123270754:+|nuORF	ENST00000264501.8_2_4:123270613-123270754:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.79107666015625	2	487.792727	973.5709	-0.24073	-0.00011743	-3.9662	-0.0019347	-4.2069	-0.0020521	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.89494	1	9761	9761		37.159	2.9866	1	1981400			38875	9479	25881	25893	44297	44297					0.08305770405377189
NPVTREFDV	9	Unmodified	_NPVTREFDV_					0	0	0		chr12:100317692-100317803|35|24.23|0.91|4.74|+|ENST00000635101|SCYL2,SCYL2;ENSG00000136021|ENST00000360820|SCYL2	chr12:100317692-100317803|35|24.23|0.91|4.74|+|ENST00000635101|SCYL2,SCYL2	chr12:100317692-100317803|35|24.23|0.91|4.74|+|ENST00000635101|SCYL2,SCYL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.2960815429688	2	538.772188	1075.52982	-0.97681	-0.00052628	-4.0501	-0.0021821	-5.0269	-0.0027084	538.7709287210405	63.209	0.12949	63.596	63.532	63.661	0.38779					4	2	2	0	0	0	0.20789	1	6798	6798		45.952	0	1	53649			38876	110	25882	25894	44298	44298					-0.0049203542478153395
NPVVTITV	8	Unmodified	_NPVVTITV_					0	0	0			REV__nc|ENSG00000189079|Q68CP9-3|ARID2	REV__nc|ENSG00000189079|Q68CP9-3|ARID2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.7513732910156	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.8347	1	7168	7168		23.042	2.0956	1	423780	+		38877	23063	25883	25895	44299	44299					0.06383284011519663
NPWDNKAVY	9	Unmodified	_NPWDNKAVY_					0	0	0		ENST00000529207.5_1_11:64898917-64899817:-|nuORF;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;ENSG00000162298|ENST00000377190|SYVN1	ENST00000529207.5_1_11:64898917-64899817:-|nuORF	ENST00000529207.5_1_11:64898917-64899817:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.7664794921875	2	553.766906	1105.51926	0.79983	0.00044292	-0.94324	-0.00052233	-0.14341	-7.9413E-05	553.7662433374409	51.045	0.86518	51.796	51.449	52.315	0.75174					51	20	4	0	0	0	0.096131	1	5071	5071		93.195	13.744	1	2576100			38878	5676	25884	25896	44300	44300					-0.029280180792056854
NPWDNKAVY	9	Unmodified	_NPWDNKAVY_					0	0	0		ENST00000529207.5_1_11:64898917-64899817:-|nuORF;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1;ENSG00000162298|ENST00000377190|SYVN1	ENST00000529207.5_1_11:64898917-64899817:-|nuORF	ENST00000529207.5_1_11:64898917-64899817:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	553.766906	1105.51926	-0.16143	-8.9393E-05	0.038882	2.1531E-05	-0.12254	-6.7861E-05	553.7667509410202	51.24	0.83309	51.675	51.285	52.118	0.43505	-0.060704	0.00077108	NaN	93.195	49	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2044800			38879	5676	25884	25896							-0.029280180792056854
NPYEPAVDF	9	Unmodified	_NPYEPAVDF_					0	0	0		nc|ENSG00000261236|Q14137-2|BOP1;ENSG00000261236|ENST00000569669|BOP1	nc|ENSG00000261236|Q14137-2|BOP1	nc|ENSG00000261236|Q14137-2|BOP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.241943359375	2	526.24019	1050.46583	0.18829	9.9087E-05	2.6166	0.0013769	2.8049	0.001476	526.2412314877313	74.357	2.6099	74.748	74.081	76.691	0.3911					105	62	3	0	0	0	0.51307	1	8376	8376		51.335	1.3109	1	679770			38880	8923	25885	25897	44301	44301					-0.05738815581707968
NPYSGDLTKF	10	Unmodified	_NPYSGDLTKF_					0	0	0		nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	nc|ENSG00000143569|Q14157-4|UBAP2L	nc|ENSG00000143569|Q14157-4|UBAP2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.2800903320312	2	571.279846	1140.54514	0.33356	0.00019056	-0.27443	-0.00015678	0.059135	3.3783E-05	571.2795580848201	54.91	0.62969	55.478	55.195	55.824	0.56836					35	14	3	0	0	0	0.13693	1	5619	5619		96.665	40.231	1	1307500			38881	4646	25886	25898	44302	44302					-0.019511686275791362
NPYSGDLTKF	10	Unmodified	_NPYSGDLTKF_					0	0	0		nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	nc|ENSG00000143569|Q14157-4|UBAP2L	nc|ENSG00000143569|Q14157-4|UBAP2L	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	571.279846	1140.54514	0.46449	0.00026536	6.2902	0.0035935	6.7547	0.0038588	571.2814539822319	55.54	0.11554	55.631	55.572	55.688	0.091167	0.082135	0.003883	NaN	96.665	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35167			38882	4646	25886	25898							-0.019511686275791362
NPYSGDLTKF	10	Unmodified	_NPYSGDLTKF_					0	0	0		nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	nc|ENSG00000143569|Q14157-4|UBAP2L	nc|ENSG00000143569|Q14157-4|UBAP2L	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	571.279846	1140.54514	0.20149	0.00011511	0.11931	6.8158E-05	0.3208	0.00018326	571.2797146671672	55.136	0.6274	55.537	55.238	55.866	0.40101	-0.011686	-0.0031677	NaN	96.665	45	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1350000			38883	4646	25886	25898							-0.019511686275791362
NQAALFHMHQ	10	Unmodified	_NQAALFHMHQ_					0	0	0			REV__nc|ENSG00000091656|Q86UP3|ZFHX4	REV__nc|ENSG00000091656|Q86UP3|ZFHX4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.7847290039062	2	598.785107	1195.55566	-0.95349	-0.00057093	1.3292	0.00079589	0.37569	0.00022496	599.2881706845951	51.238	0.45379	51.238	51.099	51.553	0					18	11	2	0	0	0	0.86272	1	4132	4132		24.519	3.682	1	81045	+		38884	17023	25887	25899	44303	44303					-0.034294644541205344
NQAARLNG	8	Unmodified	_NQAARLNG_					0	0	0		ENST00000579314.5_1_17:61565977-61574724:+|nuORF;ENST00000578839.5_1_17:61562212-61574724:+|nuORF;nc|ENSG00000159640|P12821-4|ACE;nc|ENSG00000159640|P12821-3|ACE;nc|ENSG00000159640|P12821-2|ACE;ENSG00000159640|ENST00000290866|ACE	ENST00000579314.5_1_17:61565977-61574724:+|nuORF	ENST00000579314.5_1_17:61565977-61574724:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.22869873046875	2	422.225208	842.435863	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.836	1	61.865	61.365	62.365	0.029575								0	0	0	0.29568	1	5766	5766		35.201	1.6851	1				38885	5540	25888	25900	44304	44304					0.00834290263605908
NQAEWLDLI	9	Unmodified	_NQAEWLDLI_					0	0	0			REV__ENSG00000182168|ENST00000453304|UNC5C	REV__ENSG00000182168|ENST00000453304|UNC5C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.28564453125	2	551.282389	1100.55022	-0.54372	-0.00029974	3.3342	0.0018381	2.7905	0.0015383	551.2841438551218	60.462	1.0039	60.493	59.99	60.994	0.0312					66	29	3	0	0	0	0.69624	1	5669	5669		40.778	1.972	1	112160	+		38886	22504	25889	25901	44305	44305					0.003971352350617963
NQAFLPGTVL	10	Unmodified	_NQAFLPGTVL_					0	0	0		ENST00000380752.9_1_13:30087970-30088375:-|nuORF	ENST00000380752.9_1_13:30087970-30088375:-|nuORF	ENST00000380752.9_1_13:30087970-30088375:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.294189453125	2	530.295299	1058.57605	-1.5163	-0.00080409	-2.0724	-0.001099	-3.5887	-0.0019031	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.80179	1	9119	9119		39.253	0.49923	1	1686700			38887	10934	25890	25902	44306	44306					0.049100294773325004
NQALRDATF	9	Unmodified	_NQALRDATF_					0	0	0		nc|ENSG00000163485|P30542-2|ADORA1;ENSG00000163485|ENST00000337894|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.7565307617188	2	518.26453	1034.51451	-0.41964	-0.00021748	4.3132	0.0022354	3.8936	0.0020179	518.7689690581395	60.722	0.28253	61.112	60.937	61.219	0.38945					11	7	2	0	0	0	0.20789	1	6460	6460		38.806	5.9937	1	177600			38888	15047	25891	25903	44307	44307					-0.0013690222199329583
NQALSRIH	8	Unmodified	_NQALSRIH_					0	0	0			REV__ENST00000595352.1_1_19:7621528-7622340:+|nuORF	REV__ENST00000595352.1_1_19:7621528-7622340:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7603454589844	2	469.761958	937.509363	-1.0554	-0.00049577	-1.9277	-0.00090556	-2.9831	-0.0014013	469.7608617085479	40.328	1.2889	40.334	40.071	41.36	0.0065002					73	45	3	0	0	0	0.88915	1	2579	2579		35.201	3.2459	1	435990	+		38889	29247	25892	25904	44308	44308					0.03810838706067443
NQALVFQPDSN	11	Unmodified	_NQALVFQPDSN_					0	0	0			REV__ENSG00000108578|ENST00000261714|BLMH	REV__ENSG00000108578|ENST00000261714|BLMH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	616.7989501953125	2	616.798934	1231.58332	-0.062797	-3.8733E-05	0.10413	6.4226E-05	0.041331	2.5493E-05	616.7987436689413	45.977	0.73335	45.959	45.66	46.393	-0.018585					37	17	3	0	0	0	0.70737	1	3665	3665		30.318	1.1477	1	259660	+		38890	17721	25893	25905	44309	44309					-0.023212827129100333
NQARTALLA	9	Unmodified	_NQARTALLA_					0	0	0			REV__nc|ENSG00000168763|Q8NE01-2|CNNM3	REV__nc|ENSG00000168763|Q8NE01-2|CNNM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2784423828125	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.78058	1	7942	7942		30.504	0	1	1929800	+		38891	21518	25894	25906	44310	44310					0.06031992020302823
NQCGQRPAEGQ	11	Unmodified	_NQCGQRPAEGQ_					0	0	0			REV__ENST00000602017.5_1_19:47030249-47104146:-|nuORF	REV__ENST00000602017.5_1_19:47030249-47104146:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	593.7889404296875	2	594.264736	1186.51492	0.35974	0.00021378	2.4774	0.0014722	2.8372	0.001686	594.2661771426046	68.65	0.57295	69.035	68.737	69.309	0.38482					24	13	2	0	0	0	0.17551	1	7562	7562		30.318	0	1	131290	+		38892	29326	25895	25907	44311	44311					-0.07087850564425935
NQEGTIYSDS	10	Unmodified	_NQEGTIYSDS_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|65|2|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|65|2|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|65|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.23681640625	2	557.238375	1112.4622	0.16632	9.2678E-05	-0.008013	-4.4652E-06	0.1583	8.8213E-05	557.2383002667391	28.256	0.42011	28.216	27.974	28.394	-0.039907					16	8	3	0	0	0	0.64457	1	1415	1415		47.657	6.8792	1	45343			38893	14510	25896	25908	44312	44312					-0.08953530146209232
NQELALRVGAE	11	Unmodified	_NQELALRVGAE_					0	0	0		ENST00000489173.1_1_3:52325707-52327139:+|nuORF;nc|ENSG00000168237|Q8IVS8-6|GLYCTK;nc|ENSG00000168237|Q8IVS8-3|GLYCTK;ENSG00000168237|ENST00000436784|GLYCTK	ENST00000489173.1_1_3:52325707-52327139:+|nuORF	ENST00000489173.1_1_3:52325707-52327139:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	600.3237915039062	2	600.322576	1198.6306	0.98737	0.00059274	0.66294	0.00039798	1.6503	0.00099072	600.3231505318879	111.36	0.7254	111.47	110.94	111.66	0.11118					58	26	3	0	0	0	0.75906	1	12007	12007		20.03	0.92695	1	113850			38894	12645	25897	25909	44313	44313					0.0392299655811712
NQFVRSVPI	9	Unmodified	_NQFVRSVPI_					0	0	0			REV__ENSG00000103365|ENST00000309859|GGA2	REV__ENSG00000103365|ENST00000309859|GGA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.789306640625	2	530.300916	1058.58728	-0.31514	-0.00016712	-4.0564	-0.0021511	-4.3716	-0.0023183	530.298424604737	60.061	0.80579	60.452	60.055	60.86	0.39077					39	21	3	0	0	0	0.20789	1	6386	6386		30.504	0	1	660720	+		38895	17411	25898	25910	44314	44314					0.06032851571490028
NQGIKTVKSA	10	Unmodified	_NQGIKTVKSA_					0	0	0		ENST00000586622.5_1_17:74774508-74774709:+|nuORF	ENST00000586622.5_1_17:74774508-74774709:+|nuORF	ENST00000586622.5_1_17:74774508-74774709:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3033447265625	2	523.303655	1044.59276	-0.50611	-0.00026485	0.28637	0.00014986	-0.21974	-0.00011499	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.80179	1	10169	10169		39.253	1.4413	1	3970100			38896	14172	25899	25911	44315	44315					0.07224530363305348
NQGLDVKP	8	Unmodified	_NQGLDVKP_					0	0	0			REV__ENSG00000198771|ENST00000367854|RCSD1	REV__ENSG00000198771|ENST00000367854|RCSD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78057861328125	2	435.737617	869.460681	1.707	0.00074378	0.049635	2.1628E-05	1.7566	0.00076541	435.73736633890485	35.723	0.37361	36.163	35.959	36.333	0.44043					15	9	2	0	0	0	0.4196	1	2745	2745		19.997	0	1	160010	+		38897	23379	25900	25912	44316	44316					0.020729253463287023
NQGPGVYL	8	Unmodified	_NQGPGVYL_					0	0	0			REV__ENSG00000136011|ENST00000388887|STAB2	REV__ENSG00000136011|ENST00000388887|STAB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.2185363769531	2	424.21906	846.423567	2.6374	0.0011188	-3.9582	-0.0016792	-1.3209	-0.00056033	424.21733183456104	101.6	1.8618	101.55	100.84	102.7	-0.049828					92	44	4	0	0	0	0.89457	1	11032	11032		37.028	7.8789	1	2292700	+		38898	19281	25901	25913	44317	44317					-0.005787461994373189
NQGQEVEY	8	Unmodified	_NQGQEVEY_					0	0	0		ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1;ENSG00000171566|ENST00000499023|PLRG1;ENST00000503751.5_1_4:155468160-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7102355957031	2	483.711796	965.40904	0.8658	0.0004188	-3.6972	-0.0017884	-2.8314	-0.0013696	483.7099777703553	88.514	1.0974	88.963	88.635	89.732	0.44893					54	26	4	0	0	0	0.884	1	10438	10438		33.516	1.9858	1	1360900			38899	6684	25902	25914	44318	44318					-0.07504863138240125
NQGQEVEY	8	Unmodified	_NQGQEVEY_					0	0	0		ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1;ENSG00000171566|ENST00000499023|PLRG1;ENST00000503751.5_1_4:155468160-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	483.711796	965.40904	-0.091423	-4.4223E-05	-2.5991	-0.0012572	-2.6905	-0.0013014	483.7104355583306	89.381	0.64925	89.449	89.17	89.819	0.068703	0.20957	-0.00024172	NaN	33.516	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134180			38900	6684	25902	25914							-0.07504863138240125
NQGQEVEY	8	Unmodified	_NQGQEVEY_					0	0	0		ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1;ENSG00000171566|ENST00000499023|PLRG1;ENST00000503751.5_1_4:155468160-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	483.711796	965.40904	1.3733	0.00066427	-4.217	-0.0020398	-2.8437	-0.0013755	483.70964604511386	89.536	0.69453	89.464	89.177	89.871	-0.07238	0.2237	-0.0018069	NaN	33.516	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132340			38901	6684	25902	25914							-0.07504863138240125
NQGQEVEY	8	Unmodified	_NQGQEVEY_					0	0	0		ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1;ENSG00000171566|ENST00000499023|PLRG1;ENST00000503751.5_1_4:155468160-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	483.711796	965.40904	-0.75671	-0.00036603	-2.1666	-0.001048	-2.9233	-0.001414	483.71067380765356	89.295	0.73804	89.344	89.052	89.79	0.048157	0.10373	0.0001767	NaN	33.516	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124370			38902	6684	25902	25914							-0.07504863138240125
NQGQEVEY	8	Unmodified	_NQGQEVEY_					0	0	0		ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1;ENSG00000171566|ENST00000499023|PLRG1;ENST00000503751.5_1_4:155468160-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	483.711796	965.40904	-0.76037	-0.0003678	-1.9552	-0.00094574	-2.7155	-0.0013135	483.7107607480371	88.957	0.90202	89.164	88.915	89.817	0.20731	-0.075855	0.00038123	NaN	33.516	35	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	300800			38903	6684	25902	25914							-0.07504863138240125
NQGQEVEY	8	Unmodified	_NQGQEVEY_					0	0	0		ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1;ENSG00000171566|ENST00000499023|PLRG1;ENST00000503751.5_1_4:155468160-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	483.711796	965.40904	0.68181	0.0003298	-3.5395	-0.0017121	-2.8577	-0.0013823	483.7099534763916	89.136	0.64251	89.288	88.97	89.612	0.1519	0.048315	-0.0011515	NaN	33.516	27	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	339810			38904	6684	25902	25914							-0.07504863138240125
NQGQEVEY	8	Unmodified	_NQGQEVEY_					0	0	0		ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1;ENSG00000171566|ENST00000499023|PLRG1;ENST00000503751.5_1_4:155468160-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	483.711796	965.40904	-1.668	-0.00080683	-1.3141	-0.00063564	-2.9821	-0.0014425	483.7111280146175	89.061	0.73717	89.233	88.953	89.69	0.17234	-0.006482	0.0010014	NaN	33.516	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	287080			38905	6684	25902	25914							-0.07504863138240125
NQGQEVEY	8	Unmodified	_NQGQEVEY_					0	0	0		ENST00000512719.5_1_4:155467261-155471460:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1;ENSG00000171566|ENST00000499023|PLRG1;ENST00000503751.5_1_4:155468160-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	ENST00000512719.5_1_4:155467261-155471460:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	483.711796	965.40904	-1.5527	-0.00075105	-1.1217	-0.0005426	-2.6744	-0.0012937	483.7111737968188	88.543	1.0415	89.014	88.68	89.721	0.47068	-0.22594	0.0011875	NaN	33.516	38	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1594900			38906	6684	25902	25914							-0.07504863138240125
NQGVIHRD	8	Unmodified	_NQGVIHRD_					0	0	0		ENSG00000101349|ENST00000353224|PAK5	ENSG00000101349|ENST00000353224|PAK5	ENSG00000101349|ENST00000353224|PAK5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	469.7437744140625	2	469.743765	937.472977	-0.6052	-0.00028429	3.825	0.0017968	3.2198	0.0015125	469.7454339492223	70.77	0.54588	71.154	70.957	71.503	0.38416					17	12	2	0	0	0	0.9283	1	7857	7857		49.442	3.4896	1	119970			38907	1935	25903	25915	44319	44319					0.0017396180936657402
NQGVIHRD	8	Unmodified	_NQGVIHRD_					0	0	0		ENSG00000101349|ENST00000353224|PAK5	ENSG00000101349|ENST00000353224|PAK5	ENSG00000101349|ENST00000353224|PAK5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	469.743765	937.472977	-0.69622	-0.00032704	3.7399	0.0017568	3.0437	0.0014298	469.74545493209877	70.765	0.73277	71.313	70.966	71.698	0.54756	0.07929	-2.6393E-05	NaN	49.442	21	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141640			38908	1935	25903	25915							0.0017396180936657402
NQHRARKLY	9	Unmodified	_NQHRARKLY_					0	0	0			REV__ENSG00000114670|ENST00000383366|NEK11	REV__ENSG00000114670|ENST00000383366|NEK11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.3214721679688	2	593.333613	1184.65267	0.11659	6.9176E-05	2.8484	0.0016901	2.965	0.0017592	593.3344583544153	58.21	0.19768	58.763	58.597	58.795	0.55323					5	4	2	0	0	0	0.20789	1	6082	6082		30.504	6.9809	1	111130	+		38909	18059	25904	25916	44320	44320					0.06773265817196261
NQHRQLVLDL	10	Unmodified	_NQHRQLVLDL_					0	0	0			REV__ENSG00000053501|ENST00000263897|USE1	REV__ENSG00000053501|ENST00000263897|USE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3463745117188	2	618.346386	1234.67822	-0.1645	-0.00010172	-0.48965	-0.00030278	-0.65415	-0.00040449	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.86218	1	9876	9876		32.812	2.4947	1	511870	+		38910	16390	25905	25917	44321	44321					0.07026695548938733
NQIEELSHY	9	Unmodified	_NQIEELSHY_					0	0	0			REV__nc|ENSG00000165078|Q8N4T0-2|CPA6	REV__nc|ENSG00000165078|Q8N4T0-2|CPA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	566.767822265625	2	566.767103	1131.51965	0.49119	0.00027839	-0.92162	-0.00052235	-0.43043	-0.00024396	566.7663433613731	46.277	0.52493	46.273	46.069	46.593	-0.0041618					28	12	3	0	0	0	0.55097	1	3750	3750		49.442	1.7842	1	184980	+		38911	21145	25906	25918	44322	44322					-0.04084643149985823
NQILRAIRGEL	11	Unmodified	_NQILRAIRGEL_					0	0	0			REV__ENSG00000153790|ENST00000283905|C7orf31	REV__ENSG00000153790|ENST00000283905|C7orf31	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8826293945312	2	641.883136	1281.75172	-0.046992	-3.0164E-05	-0.94307	-0.00060534	-0.99006	-0.0006355	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.69931	1	9721	9721		31.634	5.5709	1	2217900	+		38912	20356	25907	25919	44323	44323					0.12211243991396259
NQILRAIRGEL	11	Unmodified	_NQILRAIRGEL_					0	0	0			REV__ENSG00000153790|ENST00000283905|C7orf31	REV__ENSG00000153790|ENST00000283905|C7orf31	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8824462890625	2	641.883136	1281.75172	2.6248	0.0016848	-3.6695	-0.0023554	-1.0447	-0.00067061	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.62614	1	11858	11858		41.427	2.1738	1	4455800	+		38913	20356	25907	25919	44324	44324					0.12211243991396259
NQKDKTVLN	9	Unmodified	_NQKDKTVLN_					0	0	0		ENST00000607357.1_1_2:241070294-241070351:-|nuORF	ENST00000607357.1_1_2:241070294-241070351:-|nuORF	ENST00000607357.1_1_2:241070294-241070351:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2933349609375	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.64555	1	8847	8847		44.377	2.9506	1	1390700			38914	14460	25908	25920	44325	44325					0.04507939983614051
NQKDKTVLN	9	Unmodified	_NQKDKTVLN_					0	0	0		ENST00000607357.1_1_2:241070294-241070351:-|nuORF	ENST00000607357.1_1_2:241070294-241070351:-|nuORF	ENST00000607357.1_1_2:241070294-241070351:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.292724609375	2	530.293288	1058.57202	-0.034361	-1.8221E-05	0.31371	0.00016636	0.27935	0.00014814	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.69624	2	9487	9281;9487		40.778	5.1599	1	1852900			38915	14460	25908	25920	44326;44327	44327					0.04507939983614051
NQKDKTVLN	9	Unmodified	_NQKDKTVLN_					0	0	0		ENST00000607357.1_1_2:241070294-241070351:-|nuORF	ENST00000607357.1_1_2:241070294-241070351:-|nuORF	ENST00000607357.1_1_2:241070294-241070351:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2931518554688	2	530.293288	1058.57202	1.6334	0.0008662	-1.7145	-0.0009092	-0.081076	-4.2994E-05	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.58668	1	10746	10746		47.657	11.211	1	1816400			38916	14460	25908	25920	44328	44328					0.04507939983614051
NQKFRLWRWLQ	11	Unmodified	_NQKFRLWRWLQ_					0	0	0		nc|ENSG00000177054|Q8IUH4-2|ZDHHC13;nc|ENSG00000177054|Q8IUH4-3|ZDHHC13;ENST00000525490.5_1_11:19138758-19188042:+|nuORF;ENSG00000177054|ENST00000446113|ZDHHC13	nc|ENSG00000177054|Q8IUH4-2|ZDHHC13	nc|ENSG00000177054|Q8IUH4-2|ZDHHC13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2506713867188	3	525.628276	1573.863	1.1677	0.00061375	-1.4297	-0.0007515	-0.26207	-0.00013775	525.6274877199589	50.677	0.2062	51.429	51.243	51.449	0.75174					5	4	2	0	0	0	0.18276	1	5009	5009		12.433	6.4318	1	113930			38917	7115	25909	25921	44329	44329					0.0990230341935785
NQKHRLLKN	9	Unmodified	_NQKHRLLKN_					0	0	0		ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8427734375	2	575.843813	1149.67307	1.9391	0.0011166	-3.5988	-0.0020723	-1.6596	-0.00095569	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.7932	1	9760	9760		24.203	0.68005	1	5986700			38918	10274	25910	25922	44330	44330					0.10422436476983421
NQKHRLLKN	9	Unmodified	_NQKHRLLKN_					0	0	0		ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.84326171875	2	575.843813	1149.67307	0.91496	0.00052687	-2.3716	-0.0013657	-1.4567	-0.00083881	575.8423131361362	90.432	2.8004	90.479	88.667	91.467	0.046448					215	66	4	0	0	0	0.78058	1	9331	9331		30.504	3.8107	1	2025300			38919	10274	25910	25922	44331	44331					0.10422436476983421
NQKHRLLKN	9	Unmodified	_NQKHRLLKN_					0	0	0		ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8426513671875	2	575.843813	1149.67307	0.91732	0.00052823	-2.5477	-0.0014671	-1.6304	-0.00093886	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.7932	1	9665	9665		24.203	1.6231	1	5468500			38920	10274	25910	25922	44332	44332					0.10422436476983421
NQKHRLLKN	9	Unmodified	_NQKHRLLKN_					0	0	0		ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8426513671875	2	575.843813	1149.67307	0.61103	0.00035186	-2.2107	-0.001273	-1.5997	-0.00092115	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.78058	1	9239	9239		30.504	1.3541	1	6623700			38921	10274	25910	25922	44333	44333					0.10422436476983421
NQKHRLLKN	9	Unmodified	_NQKHRLLKN_					0	0	0		ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8427124023438	2	575.843813	1149.67307	0.80402	0.00046299	-2.4364	-0.001403	-1.6324	-0.00094001	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.7932	2	9289	9289;9434		24.203	1.0826	1	6947200			38922	10274	25910	25922	44334;44335	44334					0.10422436476983421
NQKKLLNHTLG	11	Unmodified	_NQKKLLNHTLG_					0	0	0			REV__nc|ENSG00000173193|Q460N5-3|PARP14	REV__nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.36865234375	2	633.369861	1264.72517	1.5976	0.0010119	-2.7562	-0.0017457	-1.1585	-0.00073377	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.75457	1	11692	11692		17.468	0	1	10012000	+		38923	21898	25911	25923	44336	44336					0.10339555100085818
NQKKLLNHTLG	11	Unmodified	_NQKKLLNHTLG_					0	0	0			REV__nc|ENSG00000173193|Q460N5-3|PARP14	REV__nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.368896484375	2	633.369861	1264.72517	2.3091	0.0014625	-3.4627	-0.0021932	-1.1537	-0.00073069	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.72374	1	11868	11868		18.262	0	1	10333000	+		38924	21898	25911	25923	44337	44337					0.10339555100085818
NQKKVSALN	9	Unmodified	_NQKKVSALN_					0	0	0			REV__ENST00000550444.1_3_12:104458664-104458877:+|nuORF	REV__ENST00000550444.1_3_12:104458664-104458877:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.28997802734375	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.71772	2	10099	10039;10099		39.253	2.2742	1	9038000	+		38925	28599	25912	25924	44338;44339	44339					0.06628261191804086
NQKMLQVA	8	Unmodified	_NQKMLQVA_					0	0	0			REV__nc|ENSG00000153827|Q14669-4|TRIP12	REV__nc|ENSG00000153827|Q14669-4|TRIP12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.254638671875	2	466.25512	930.495686	-1.5133	-0.00070558	-1.0867	-0.00050666	-2.6	-0.0012122	466.2545098406443	61.17	1.13	61.17	60.102	61.232	0					111	49	3	0	0	0	0.884	1	5321	5321		33.516	1.5607	1	374960	+		38926	20360	25913	25925	44340	44340					0.027658448826400672
NQKQQKPT	8	Unmodified	_NQKQQKPT_					0	0	0		nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;ENST00000460660.1_1_2:201677931-201678069:+|nuORF	nc|ENSG00000082153|Q7L1Q6-2|BZW1	nc|ENSG00000082153|Q7L1Q6-2|BZW1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.2669982910156	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.91977	1	8417	8417		45.952	5.1738	1	1702800			38927	1479	25914	25926	44341	44341					0.03315401640657001
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2640686035156	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.89494	2	7637	7637;7738		37.159	5.2042	1	2957200			38928	11177	25915	25927	44342;44343	44342					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26123046875	2	457.264333	912.514114	-0.13162	-6.0186E-05	0.19173	8.7669E-05	0.060104	2.7483E-05	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.87479	2	7647	7647;7755		38.806	3.7075	1	1194000			38929	11177	25915	25927	44344;44345	44344					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26385498046875	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.89494	1	8525	8525		37.159	2.9866	1	4885100			38930	11177	25915	25927	44346	44346					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2639465332031	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.89494	1	8184	8184		37.159	5.2042	1	4814400			38931	11177	25915	25927	44347	44347					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2640380859375	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.89494	1	7516	7516		37.159	3.6435	1	1329900			38932	11177	25915	25927	44348	44348					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2633361816406	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.89494	1	8147	8147		37.159	2.9866	1	4732500			38933	11177	25915	25927	44349	44349					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2635498046875	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.89494	1	7717	7717		37.159	0	1	1262800			38934	11177	25915	25927	44350	44350					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.26397705078125	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.89494	1	7990	7990		37.159	0	1	4597500			38935	11177	25915	25927	44351	44351					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2637634277344	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.89494	1	7500	7500		37.159	2.9866	1	1032000			38936	11177	25915	25927	44352	44352					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26385498046875	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.89494	2	7805	7805;7853		37.159	6.6555	1	4061400			38937	11177	25915	25927	44353;44354	44353					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.263671875	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.89962	2	9421	9421;9505		45.952	10.751	1	3505500			38938	11177	25915	25927	44355;44356	44355					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2630920410156	2	457.264333	912.514114	-0.11988	-5.4815E-05	0.13028	5.9574E-05	0.010409	4.7595E-06	457.26428644836	79.385	2.7838	79.935	78.442	81.226	0.54945					170	65	4	0	0	0	0.87064	1	9292	9292		29.15	1.2673	1	1064700			38939	11177	25915	25927	44357	44357					0.05435722848858404
NQKRIPAS	8	Unmodified	_NQKRIPAS_					0	0	0		ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	ENST00000398117.1_1_18:60986791-60986938:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2641906738281	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.89494	3	9431	9418;9431;9701		45.952	7.1458	1	4402400			38940	11177	25915	25927	44358;44359;44360	44359					0.05435722848858404
NQKSPKGKLRL	11	Unmodified	_NQKSPKGKLRL_					0	0	0		ENSG00000130957|ENST00000375337|FBP2	ENSG00000130957|ENST00000375337|FBP2	ENSG00000130957|ENST00000375337|FBP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8930053710938	2	634.893503	1267.77245	-0.0069402	-4.4063E-06	-1.6425	-0.0010428	-1.6494	-0.0010472	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.55601	1	10981	10981		47.96	5.5634	1	31286000			38941	3702	25916	25928	44361	44361					0.14927834371087556
NQKSPKGKLRL	11	Unmodified	_NQKSPKGKLRL_					0	0	0		ENSG00000130957|ENST00000375337|FBP2	ENSG00000130957|ENST00000375337|FBP2	ENSG00000130957|ENST00000375337|FBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8927001953125	2	634.893503	1267.77245	-0.13084	-8.307E-05	-1.4622	-0.00092832	-1.593	-0.0010114	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.62614	1	11401	11401		41.427	3.6151	1	40768000			38942	3702	25916	25928	44362	44362					0.14927834371087556
NQKSPKGKLRL	11	Unmodified	_NQKSPKGKLRL_					0	0	0		ENSG00000130957|ENST00000375337|FBP2	ENSG00000130957|ENST00000375337|FBP2	ENSG00000130957|ENST00000375337|FBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8924560546875	2	634.893503	1267.77245	0.93451	0.00059331	-2.8314	-0.0017976	-1.8969	-0.0012043	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.57736	1	11225	11225		46.457	2.0796	1	69492000			38943	3702	25916	25928	44363	44363					0.14927834371087556
NQKTGQLLGG	10	Unmodified	_NQKTGQLLGG_					0	0	0			REV__nc|ENSG00000091262|O95255-3|ABCC6	REV__nc|ENSG00000091262|O95255-3|ABCC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.2799072265625	2	508.28018	1014.54581	-0.055639	-2.828E-05	0.18106	9.2031E-05	0.12542	6.3751E-05	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.80179	1	9065	9065		39.253	1.4413	1	1918800	+		38944	29727	25917	25929	44364	44364					0.03911670812158263
NQKTGQLLGG	10	Unmodified	_NQKTGQLLGG_					0	0	0			REV__nc|ENSG00000091262|O95255-3|ABCC6	REV__nc|ENSG00000091262|O95255-3|ABCC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2798767089844	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.80179	2	9317	9317;9341		39.253	5.3312	1	1903500	+		38945	29727	25917	25929	44365;44366	44365					0.03911670812158263
NQKTGQLLGG	10	Unmodified	_NQKTGQLLGG_					0	0	0			REV__nc|ENSG00000091262|O95255-3|ABCC6	REV__nc|ENSG00000091262|O95255-3|ABCC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.28009033203125	2	508.28018	1014.54581	-0.39653	-0.00020155	0.29161	0.00014822	-0.10492	-5.3328E-05	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.66675	1	8724	8724		46.457	2.0796	1	2080300	+		38946	29727	25917	25929	44367	44367					0.03911670812158263
NQKTGQLLGG	10	Unmodified	_NQKTGQLLGG_					0	0	0			REV__nc|ENSG00000091262|O95255-3|ABCC6	REV__nc|ENSG00000091262|O95255-3|ABCC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2799377441406	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.86348	1	8788	8788		31.53	0	1	1814000	+		38947	29727	25917	25929	44368	44368					0.03911670812158263
NQKTKKTAL	9	Unmodified	_NQKTKKTAL_					0	0	0		ENST00000260777.14_3_10:118645880-118645988:-|nuORF	ENST00000260777.14_3_10:118645880-118645988:-|nuORF	ENST00000260777.14_3_10:118645880-118645988:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.31494140625	2	516.314023	1030.61349	1.9037	0.0009829	-1.9331	-0.0009981	-0.029436	-1.5198E-05	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.7932	1	12188	12188		25.574	2.5316	1	22616000			38948	9393	25918	25930	44369	44369					0.09941120742928433
NQKVKISVF	9	Unmodified	_NQKVKISVF_					0	0	0			REV__ENST00000310528.8_1_13:53273405-53273483:+|nuORF	REV__ENST00000310528.8_1_13:53273405-53273483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.81689453125	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.69624	1	8841	8841		40.778	5.1599	1	4022300	+		38949	24891	25919	25931	44370	44370					0.09498308748334239
NQKVKISVF	9	Unmodified	_NQKVKISVF_					0	0	0			REV__ENST00000310528.8_1_13:53273405-53273483:+|nuORF	REV__ENST00000310528.8_1_13:53273405-53273483:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8170166015625	2	531.818941	1061.62333	-0.69524	-0.00036974	-3.1977	-0.0017006	-3.8929	-0.0020703	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.77244	1	10196	10196		32.812	2.4947	1	1296000	+		38950	24891	25919	25931	44371	44371					0.09498308748334239
NQKVSLRSD	9	Unmodified	_NQKVSLRSD_					0	0	0			REV__ENSG00000104213|ENST00000251630|PDGFRL	REV__ENSG00000104213|ENST00000251630|PDGFRL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3032836914062	2	523.783087	1045.55162	-1.5376	-0.00080535	1.7977	0.00094162	0.26016	0.00013627	523.7839583120115	90.361	1.5855	90.537	89.606	91.192	0.17579					63	37	2	0	0	0	0.20789	1	8993	8993		31.53	5.9558	1	148960	+		38951	17442	25920	25932	44372	44372					0.03066769323822882
NQKVSLRSD	9	Unmodified	_NQKVSLRSD_					0	0	0			REV__ENSG00000104213|ENST00000251630|PDGFRL	REV__ENSG00000104213|ENST00000251630|PDGFRL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3037109375	2	523.783087	1045.55162	-1.1229	-0.00058817	1.5217	0.00079706	0.3988	0.00020889	523.7837190867151	90.339	1.4652	90.809	90.562	92.028	0.47068					58	35	2	0	0	0	0.20789	1	10836	10836		40.778	20.296	1	167150	+		38952	17442	25920	25932	44373	44373					0.03066769323822882
NQLALKLM	8	Unmodified	_NQLALKLM_					0	0	0			REV__ENST00000540272.1_1_11:60711109-60714230:-|nuORF	REV__ENST00000540272.1_1_11:60711109-60714230:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7777404785156	2	465.775688	929.536823	-0.1189	-5.538E-05	4.3164	0.0020105	4.1975	0.0019551	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.884	1	7892	7892		33.516	0.022601	1	345200	+		38953	17816	25921	25933	44374	44374					0.06923605922099796
NQLKKNMER	9	Unmodified	_NQLKKNMER_					0	0	0			REV__nc|ENSG00000068400|Q4V328-4|GRIPAP1	REV__nc|ENSG00000068400|Q4V328-4|GRIPAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.8147583007812	2	580.813864	1159.61318	0.018085	1.0504E-05	-2.2872	-0.0013284	-2.2691	-0.0013179	580.8126420306415	22.361	0.3507	22.426	22.232	22.583	0.064745					18	12	2	0	0	0	0.69624	1	679	679		40.778	5.6261	1	36287	+		38954	16559	25922	25934	44375	44375					0.03975377751430642
NQLKKNMER	9	Unmodified	_NQLKKNMER_					0	0	0			REV__nc|ENSG00000068400|Q4V328-4|GRIPAP1	REV__nc|ENSG00000068400|Q4V328-4|GRIPAP1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	580.813864	1159.61318	0.018085	1.0504E-05	-2.2872	-0.0013284	-2.2691	-0.0013179	580.8126420306415	22.361	0.3507	22.426	22.232	22.583	0.064745	-0.062317	0.00019738	NaN	40.778	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36287	+		38955	16559	25922	25934							0.03975377751430642
NQLKKNMER	9	Unmodified	_NQLKKNMER_					0	0	0			REV__nc|ENSG00000068400|Q4V328-4|GRIPAP1	REV__nc|ENSG00000068400|Q4V328-4|GRIPAP1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	580.813864	1159.61318	0.039054	2.2683E-05	-2.4978	-0.0014507	-2.4587	-0.0014281	580.8125705241928	22.609	0.3818	22.55	22.443	22.825	-0.05867	0.062317	-4.7224E-05	NaN	40.778	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31331	+		38956	16559	25922	25934							0.03975377751430642
NQLKKRRRLDS	11	Unmodified	_NQLKKRRRLDS_					0	0	0		nc|ENSG00000043514|Q9H3H1-6|TRIT1;nc|ENSG00000043514|Q9H3H1-3|TRIT1;nc|ENSG00000043514|Q9H3H1-2|TRIT1;nc|ENSG00000043514|Q9H3H1-5|TRIT1;nc|ENSG00000043514|Q9H3H1-4|TRIT1;ENSG00000043514|ENST00000316891|TRIT1	nc|ENSG00000043514|Q9H3H1-6|TRIT1	nc|ENSG00000043514|Q9H3H1-6|TRIT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2884826660156	3	471.951419	1412.83243	-0.86476	-0.00040812	2.5957	0.0012251	1.731	0.00081694	472.28734251290155	106.13	1.5156	106.13	105.46	106.98	0					106	34	5	0	0	0	0.81021	1	10997	10997		9.2118	0	1	397120			38957	943	25923	25935	44376	44376					0.14252525034316932
NQLKKRRRLDS	11	Unmodified	_NQLKKRRRLDS_					0	0	0		nc|ENSG00000043514|Q9H3H1-6|TRIT1;nc|ENSG00000043514|Q9H3H1-3|TRIT1;nc|ENSG00000043514|Q9H3H1-2|TRIT1;nc|ENSG00000043514|Q9H3H1-5|TRIT1;nc|ENSG00000043514|Q9H3H1-4|TRIT1;ENSG00000043514|ENST00000316891|TRIT1	nc|ENSG00000043514|Q9H3H1-6|TRIT1	nc|ENSG00000043514|Q9H3H1-6|TRIT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.28717041015625	3	471.951419	1412.83243	3.0904	0.0014585	-2.6451	-0.0012483	0.44535	0.00021018	471.9501713198561	105.03	0.67872	105.26	105.01	105.69	0.2268					36	16	4	0	0	0	0.76892	1	12824	12824		17.833	3.1395	1	295370			38958	943	25923	25935	44377	44377					0.14252525034316932
NQLLEMVY	8	Oxidation (M)	_NQLLEM(Oxidation (M))VY_		NQLLEM(1)VY		NQLLEM(69)VY	0	0	1			REV__ENSG00000038358|ENST00000358933|EDC4	REV__ENSG00000038358|ENST00000358933|EDC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.249755859375	2	513.252243	1024.48993	-0.28551	-0.00014654	-3.142	-0.0016127	-3.4275	-0.0017592	513.2505615191272	71.126	0.99968	71.511	71	71.999	0.3845					48	23	3	0	0	0	0.66521	1	7887	7887		68.787	16.488	1	845970	+		38959	16303	25924	25936	44378	44378		234			-0.021332984196760663
NQLLFFPLL	9	Unmodified	_NQLLFFPLL_					0	0	0		ENSG00000174004|ENST00000328557|NRROS	ENSG00000174004|ENST00000328557|NRROS	ENSG00000174004|ENST00000328557|NRROS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8261108398438	2	552.826235	1103.63792	0.64746	0.00035793	-4.1535	-0.0022962	-3.506	-0.0019382	552.8237799511401	77.799	0.7224	77.936	77.632	78.354	0.13667					62	25	3	0	0	0	0.76996	1	7298	7298		33.516	0.70317	1	521170			38960	6904	25925	25937	44379	44379					0.09024380896471484
NQLLKKLFFT	10	Unmodified	_NQLLKKLFFT_					0	0	0			REV__ENST00000450531.1_1_2:130626998-130634934:-|nuORF	REV__ENST00000450531.1_1_2:130626998-130634934:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3768920898438	2	626.376623	1250.73869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.935	1	59.022	58.522	59.522	0.087002								0	0	0	0.45132	1	5026	5026		32.812	3.6629	1		+		38961	26868	25926	25938	44380	44380					0.123354128793153
NQLQELDKQ	9	Unmodified	_NQLQELDKQ_					0	0	0		nc|ENSG00000165617|Q9NYF0|DACT1;ENSG00000165617|ENST00000395153|DACT1	nc|ENSG00000165617|Q9NYF0|DACT1	nc|ENSG00000165617|Q9NYF0|DACT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.29150390625	2	558.288202	1114.56185	2.2517	0.0012571	0.070447	3.933E-05	2.3222	0.0012965	558.2897837281895	105.54	0.7603	105.69	105.14	105.9	0.15584					53	18	4	0	0	0	0.77244	1	12862	12862		32.812	0	1	592990			38962	6100	25927	25939	44381	44381					0.009153322583642876
NQLQLKLLKR	10	Unmodified	_NQLQLKLLKR_					0	0	0			REV__nc|ENSG00000149636|Q9H410-3|DSN1	REV__nc|ENSG00000149636|Q9H410-3|DSN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.939453125	3	418.60659	1252.79794	-1.8624	-0.00077961	-2.5139	-0.0010523	-4.3763	-0.001832	418.60545242213567	49.334	1.6272	49.359	48.04	49.667	0.025574					69	41	2	0	0	0	0.85633	1	3791	3791		21.686	3.1547	1	105080	+		38963	20186	25928	25940	44382	44382					0.1816530889348087
NQLSSVIFSNL	11	Unmodified	_NQLSSVIFSNL_					0	0	0			REV__ENSG00000221887|ENST00000408945|HMSD	REV__ENSG00000221887|ENST00000408945|HMSD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3295288085938	2	611.327328	1220.6401	0.41561	0.00025408	2.9005	0.0017732	3.3161	0.0020272	611.3290637952541	78.627	1.0378	78.573	78.292	79.329	-0.053558					59	27	3	0	0	0	0.62614	1	7848	7848		41.427	0.64845	1	333110	+		38964	23713	25929	25941	44383	44383					0.03860764843625475
NQLSVHSY	8	Unmodified	_NQLSVHSY_					0	0	0			REV__nc|ENSG00000132164|P48066-2|SLC6A11	REV__nc|ENSG00000132164|P48066-2|SLC6A11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.2328186035156	2	474.232699	946.450845	-1.2869	-0.00061028	1.0819	0.00051306	-0.20502	-9.7225E-05	474.23308037889285	39.831	1.0553	39.787	39.407	40.462	-0.043694					35	24	2	0	0	0	0.92457	1	2895	2895		47.916	8.6628	1	313750	+		38965	18985	25930	25942	44384	44384					-0.0245226265905103
NQLTIGRQAL	10	Unmodified	_NQLTIGRQAL_					0	0	0			REV__ENST00000569492.1_1_16:35037299-35037500:-|nuORF	REV__ENST00000569492.1_1_16:35037299-35037500:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.8252563476562	2	557.32238	1112.63021	-0.44428	-0.00024761	0.44078	0.00024566	-0.0034992	-1.9502E-06	557.322590609542	27.911	0.52702	27.947	27.696	28.223	0.03607					27	18	2	0	0	0	0.60985	1	1294	1294		49.536	8.1094	1	54882	+		38966	28914	25931	25943	44385	44385					0.07839621628886562
NQLVRLAHR	9	Unmodified	_NQLVRLAHR_					0	0	0		ENSG00000166508|ENST00000303887|MCM7;ENST00000463722.5_1_7:99697202-99698956:-|nuORF;nc|ENSG00000166508|P33993-2|MCM7	ENSG00000166508|ENST00000303887|MCM7	ENSG00000166508|ENST00000303887|MCM7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.83056640625	2	553.830706	1105.64686	1.2868	0.00071265	-1.764	-0.00097697	-0.47725	-0.00026432	553.8295040340431	102.46	0.73058	102.5	102.18	102.91	0.043198					39	17	3	0	0	0	0.7932	1	11068	11068		23.042	1.0826	1	576050			38967	6204	25932	25944	44386	44386					0.09826167305504896
NQLVRSTKS	9	Unmodified	_NQLVRSTKS_					0	0	0			REV__nc|ENSG00000140379|Q16548-2|BCL2A1	REV__nc|ENSG00000140379|Q16548-2|BCL2A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7933349609375	2	516.793455	1031.57236	1.5571	0.00080467	-1.5393	-0.0007955	0.017752	9.1739E-06	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.78983	1	9223	9223		27.882	0	1	834930	+		38968	19609	25933	25945	44387	44387					0.057833597034687045
NQLVSCDAKF	10	Unmodified	_NQLVSCDAKF_					0	0	0			REV__nc|ENSG00000112365|O43167-2|ZBTB24	REV__nc|ENSG00000112365|O43167-2|ZBTB24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.7733764648438	2	562.773874	1123.53319	-0.19802	-0.00011144	0.052688	2.9652E-05	-0.14533	-8.1788E-05	562.7739414193032	63.701	0.66625	63.728	63.476	64.143	0.027138					44	21	3	0	0	0	0.44803	1	5972	5972		60.118	8.7828	1	199620	+		38969	29784	25934	25946	44388	44388					-0.023631086424074965
NQMSPPPQYNS	11	Unmodified	_NQMSPPPQYNS_					0	0	0			REV__ENSG00000117713|ENST00000324856|ARID1A	REV__ENSG00000117713|ENST00000324856|ARID1A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.7815246582031	3	421.520522	1261.53974	-0.16085	-6.7803E-05	0.67405	0.00028413	0.5132	0.00021632	421.5206513600103	35.607	1.0194	35.595	35	36.02	-0.012203					29	22	2	0	0	0	0.17432	1	2273	2273		21.032	0.19508	1	23338	+		38970	18279	25935	25947	44389	44389					-0.08057215481676394
NQMVVAFKEEN	11	Unmodified	_NQMVVAFKEEN_					0	0	0		ENSG00000055732|ENST00000370589|MCOLN3	ENSG00000055732|ENST00000370589|MCOLN3	ENSG00000055732|ENST00000370589|MCOLN3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.80682373046875	3	436.879939	1307.61799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.5	1	114.56	114.06	115.06	0.061073								0	0	0	0.56276	1	12239	12239		22.562	2.2466	1				38971	1028	25936	25948	44390	44390					-0.023517828964486398
NQNRCIVILRE	11	Unmodified	_NQNRCIVILRE_					0	0	0		ENSG00000107929|ENST00000316157|LARP4B	ENSG00000107929|ENST00000316157|LARP4B	ENSG00000107929|ENST00000316157|LARP4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.2485656738281	3	453.250477	1356.7296	-0.33158	-0.00015029	-2.1781	-0.00098722	-2.5097	-0.0011375	453.24944205426203	24.005	1.7673	23.959	23.523	25.29	-0.04598					97	41	4	0	0	0	0.69687	1	894	894		32.034	2.4834	1	180870			38972	2379	25937	25949	44391	44391					0.06550696251338195
NQNRCVMHNC	10	Unmodified	_NQNRCVMHNC_					0	0	0			REV__ENSG00000166233|ENST00000379887|ARIH1	REV__ENSG00000166233|ENST00000379887|ARIH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.8372802734375	2	609.749884	1217.48521	-0.1173	-7.1522E-05	3.0165	0.0018393	2.8992	0.0017678	610.2539466721032	54.564	0.12565	55.148	55.085	55.211	0.58474					4	2	2	0	0	0	0.37624	1	5576	5576		14.865	0	1	95032	+		38973	21270	25938	25950	44392	44392					-0.11482829105739256
NQPLQRRLNLL	11	Unmodified	_NQPLQRRLNLL_					0	0	0			REV__nc|ENSG00000197879|O00159-2|MYO1C	REV__nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6082763671875	3	455.608882	1363.80482	-1.1702	-0.00053316	0.058698	2.6743E-05	-1.1115	-0.00050642	455.6088473881977	71.256	2.1835	71.333	70.628	72.811	0.076225					206	91	3	0	0	0	0.74771	1	6632	6632		22.562	2.9347	1	589510	+		38974	23276	25939	25951	44393	44393					0.13746621774089363
NQPLQRRLNLL	11	Unmodified	_NQPLQRRLNLL_					0	0	0			REV__nc|ENSG00000197879|O00159-2|MYO1C	REV__nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6087951660156	3	455.608882	1363.80482	-0.55128	-0.00025117	-0.41199	-0.00018771	-0.96328	-0.00043888	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.74405	1	6956	6956		23.378	0.81632	1	1732400	+		38975	23276	25939	25951	44394	44394					0.13746621774089363
NQPLQRRLNLL	11	Unmodified	_NQPLQRRLNLL_					0	0	0			REV__nc|ENSG00000197879|O00159-2|MYO1C	REV__nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6073303222656	3	455.608882	1363.80482	-0.88204	-0.00040187	-0.15867	-7.2292E-05	-1.0407	-0.00047416	455.6087169982617	69.938	2.9068	70.322	69.842	72.749	0.38416					146	73	3	0	0	0	0.62914	3	7674	7674;7738;7760		41.08	12.503	1	869170	+		38976	23276	25939	25951	44395;44396;44397	44395					0.13746621774089363
NQPLQRRLNLL	11	Unmodified	_NQPLQRRLNLL_					0	0	0			REV__nc|ENSG00000197879|O00159-2|MYO1C	REV__nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.60858154296875	3	455.608882	1363.80482	-0.22489	-0.00010246	-0.74709	-0.00034038	-0.97198	-0.00044284	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.67762	1	7478	7478		35.178	2.1388	1	1863900	+		38977	23276	25939	25951	44398	44398					0.13746621774089363
NQPLQRRLNLL	11	Unmodified	_NQPLQRRLNLL_					0	0	0			REV__nc|ENSG00000197879|O00159-2|MYO1C	REV__nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6090393066406	3	455.608882	1363.80482	-0.22342	-0.00010179	-0.82695	-0.00037677	-1.0504	-0.00047856	455.6084251791674	69.831	3.554	70.377	70.039	73.593	0.54693					191	88	3	0	0	0	0.72374	1	7784	7784		27.644	3.368	1	1270100	+		38978	23276	25939	25951	44399	44399					0.13746621774089363
NQPTVKVFV	9	Unmodified	_NQPTVKVFV_					0	0	0			REV__ENST00000397415.7_1_6:42848808-42854199:+|nuORF	REV__ENST00000397415.7_1_6:42848808-42854199:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.297842	1030.58113	-0.66834	-0.00034506	1.1129	0.00057457	0.44453	0.00022951	516.2982820035843	100.63	0.17676	100.63	100.55	100.73	0					5	3	2	0	0	0	0.20789	1	10205	10205		42.396	13.247	1	15530	+		38979	19996	25940	25952	44400	44400					0.06706333339934645
NQQGKKKN	8	Unmodified	_NQQGKKKN_					0	0	0			REV__L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|89|2|sense	REV__L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|89|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.76605224609375	2	472.76724	943.519927	-0.10807	-5.1094E-05	0.17013	8.0433E-05	0.062057	2.9339E-05	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.884	2	8235	8235;8341		35.201	6.8227	1	501240	+		38980	29500	25941	25953	44401;44402	44401					0.045908213605116543
NQQGKKKN	8	Unmodified	_NQQGKKKN_					0	0	0			REV__L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|89|2|sense	REV__L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|89|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7671813964844	2	472.76724	943.519927	-0.41041	-0.00019403	0.54101	0.00025577	0.1306	6.1745E-05	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.85277	2	8336	8336;8421		30.504	7.4612	1	590200	+		38981	29500	25941	25953	44403;44404	44403					0.045908213605116543
NQQHFALLF	9	Unmodified	_NQQHFALLF_					0	0	0		ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	559.29541015625	2	559.293091	1116.57163	0.8055	0.00045051	4.0958	0.0022908	4.9013	0.0027413	559.2951926081377	94.36	1.7243	94.523	94.167	95.891	0.16307					68	41	3	0	0	0	0.67235	1	9659	9659		42.474	6.0277	1	210510			38982	5344	25942	25954	44405	44405					0.018005650544182572
NQQHFALLF	9	Unmodified	_NQQHFALLF_					0	0	0		ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	559.293091	1116.57163	-1.0656	-0.00059598	5.8287	0.0032599	4.7631	0.0026639	559.2961561164492	94.707	1.8368	94.775	94.389	96.225	0.068344	0.24087	0.0015379	NaN	42.474	79	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	214210			38983	5344	25942	25954							0.018005650544182572
NQQHFALLF	9	Unmodified	_NQQHFALLF_					0	0	0		ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	559.293091	1116.57163	2.3116	0.0012929	2.5621	0.0014329	4.8737	0.0027258	559.2944139163478	94.575	2.5216	94.516	93.456	95.978	-0.059212	-0.017864	-0.0021161	NaN	42.474	88	59	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	325630			38984	5344	25942	25954							0.018005650544182572
NQQHFALLF	9	Unmodified	_NQQHFALLF_					0	0	0		ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	559.293091	1116.57163	1.368	0.00076513	3.2817	0.0018354	4.6498	0.0026006	559.294657915824	94.448	2.0939	94.494	94.173	96.267	0.046173	-0.04035	-0.0013111	NaN	42.474	77	49	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	175740			38985	5344	25942	25954							0.018005650544182572
NQQHFALLF	9	Unmodified	_NQQHFALLF_					0	0	0		ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	559.293091	1116.57163	0.36789	0.00020576	4.6481	0.0025997	5.016	0.0028054	559.2954920588872	94.308	1.7686	94.537	94.199	95.968	0.22863	0.002453	0.00021734	NaN	42.474	78	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	216030			38986	5344	25942	25954							0.018005650544182572
NQQHFALLF	9	Unmodified	_NQQHFALLF_					0	0	0		ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	ENSG00000155833|ENST00000374798|CYLC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	559.293091	1116.57163	-1.4219	-0.00079528	6.3487	0.0035508	4.9268	0.0027555	559.2963979054473	94.162	1.8145	94.36	94.244	96.058	0.19827	-0.17429	0.0021196	NaN	42.474	78	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	247000			38987	5344	25942	25954							0.018005650544182572
NQQLARAL	8	Unmodified	_NQQLARAL_					0	0	0			REV__ENSG00000106100|ENST00000222823|NOD1	REV__ENSG00000106100|ENST00000222823|NOD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2640686035156	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.884	1	7955	7955		33.516	0.70317	1	4597500	+		38988	17597	25943	25955	44406	44406					0.054357228488470355
NQQNQLRTK	9	Unmodified	_NQQNQLRTK_					0	0	0			REV__ENST00000532361.5_1_11:794242-795006:-|nuORF	REV__ENST00000532361.5_1_11:794242-795006:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.3052368164062	2	565.307261	1128.59997	0.46511	0.00026293	2.3001	0.0013003	2.7652	0.0015632	565.3081896774438	52.777	0.53952	53.391	53.116	53.655	0.61436					21	12	3	0	0	0	0.51307	1	5326	5326		51.335	1.8939	1	454780	+		38989	22215	25944	25956	44407	44407					0.04081262963700283
NQQRLNDN	8	Unmodified	_NQQRLNDN_					0	0	0			REV__ENSG00000111860|ENST00000368491|CEP85L	REV__ENSG00000111860|ENST00000368491|CEP85L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904968261719	2	501.241587	1000.46862	0.67668	0.00033918	-3.9052	-0.0019575	-3.2285	-0.0016183	501.2394506398539	86.656	0.25674	86.805	86.656	86.912	0.14902					6	5	2	0	0	0	0.4196	1	8522	8522		45.952	0	1	37686	+		38990	17901	25945	25957	44408	44408					-0.03159547404197838
NQQVLRLS	8	Unmodified	_NQQVLRLS_					0	0	0			REV__ENST00000243050.5_1_12:52445232-52448188:+|nuORF	REV__ENST00000243050.5_1_12:52445232-52448188:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2774353027344	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.89043	2	8742	8555;8742		44.117	1.7207	1	7040000	+		38991	24234	25946	25958	44409;44410	44410					0.06031992020314192
NQQVLRLS	8	Unmodified	_NQQVLRLS_					0	0	0			REV__ENST00000243050.5_1_12:52445232-52448188:+|nuORF	REV__ENST00000243050.5_1_12:52445232-52448188:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2773742675781	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.91472	1	8294	8294		44.117	3.3386	1	6593200	+		38992	24234	25946	25958	44411	44411					0.06031992020314192
NQRAQITP	8	Unmodified	_NQRAQITP_					0	0	0			REV__nc|ENSG00000149294|P13591-6|NCAM1	REV__nc|ENSG00000149294|P13591-6|NCAM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.25372314453125	2	464.253966	926.493378	-0.76573	-0.00035549	0.99904	0.00046381	0.2333	0.00010831	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.89962	1	9623	9623		38.806	0	1	1046600	+		38993	20159	25947	25959	44412	44412					0.027191324691784757
NQRDLLVSA	9	Unmodified	_NQRDLLVSA_					0	0	0		ENST00000490770.5_1_1:155110767-155110920:+|nuORF	ENST00000490770.5_1_1:155110767-155110920:+|nuORF	ENST00000490770.5_1_1:155110767-155110920:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.2800598144531	2	508.28018	1014.54581	-0.055639	-2.828E-05	0.18106	9.2031E-05	0.12542	6.3751E-05	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.51307	1	8921	8921		51.335	7.2187	1	1918800			38994	12673	25948	25960	44413	44413					0.03911670812135526
NQRIKELINII	11	Unmodified	_NQRIKELINII_					0	0	0		nc|ENSG00000138182|Q96Q89-4|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B	nc|ENSG00000138182|Q96Q89-4|KIF20B	nc|ENSG00000138182|Q96Q89-4|KIF20B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9431457519531	3	451.945271	1352.81398	-1.6541	-0.00074756	-2.5453	-0.0011503	-4.1994	-0.0018979	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.75121	1	4684	4684		21.78	2.5177	1	430100			38995	4280	25949	25961	44414	44414					0.15168970339777843
NQRLLRERRL	10	Unmodified	_NQRLLRERRL_					0	0	0			REV__ENSG00000112996|ENST00000507110|MRPS30	REV__ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.94207763671875	3	451.944376	1352.8113	0.028854	1.304E-05	-2.4427	-0.0011039	-2.4138	-0.0010909	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.86551	1	4878	4878		14.694	0.60766	1	513120	+		38996	17974	25950	25962	44415	44415					0.14900559725447238
NQRQKQKRMKF	11	Unmodified	_NQRQKQKRMKF_					0	0	0		nc|ENSG00000152192|Q01851-2|POU4F1;ENSG00000152192|ENST00000377208|POU4F1	nc|ENSG00000152192|Q01851-2|POU4F1	nc|ENSG00000152192|Q01851-2|POU4F1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.9518737792969	3	497.949021	1490.82523	1.0287	0.00051223	3.3154	0.0016509	4.344	0.0021631	497.95058281614104	17.211	0.41666	17.288	17.094	17.511	0.07715					38	17	3	0	0	0	0.7896	1	166	166		13.508	2.9211	1	63871			38997	5158	25951	25963	44416	44416					0.09945469162221343
NQRQKQKRMKF	11	Unmodified	_NQRQKQKRMKF_					0	0	0		nc|ENSG00000152192|Q01851-2|POU4F1;ENSG00000152192|ENST00000377208|POU4F1	nc|ENSG00000152192|Q01851-2|POU4F1	nc|ENSG00000152192|Q01851-2|POU4F1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.9512023925781	3	497.949021	1490.82523	-0.077729	-3.8705E-05	4.3515	0.0021668	4.2738	0.0021281	497.9511157857349	24.867	0.94643	24.539	24.025	24.972	-0.32825					56	20	4	0	0	0	0.75457	1	1222	1222		21.032	2.5012	1	643250			38998	5158	25951	25963	44417	44417					0.09945469162221343
NQRRLEMDKQK	11	Unmodified	_NQRRLEMDKQK_					0	0	0			REV__ENST00000551293.1_1_12:48095240-48099773:-|nuORF	REV__ENST00000551293.1_1_12:48095240-48099773:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.8105163574219	3	482.592903	1444.75688	-0.36234	-0.00017486	-2.1176	-0.0010219	-2.48	-0.0011968	482.59217599027556	30.608	0.69852	30.612	30.316	31.015	0.0037212					21	15	2	0	0	0	0.1745	1	2002	2002		23.378	5.5448	1	100110	+		38999	16077	25952	25964	44418	44418					0.05229179791717797
NQRSESNRF	9	Unmodified	_NQRSESNRF_					0	0	0		ENST00000564306.5_1_15:65892084-65903486:-|nuORF;nc|ENSG00000138614|Q96SY0-4|INTS14;nc|ENSG00000138614|Q96SY0-3|INTS14;ENSG00000138614|ENST00000313182|INTS14	ENST00000564306.5_1_15:65892084-65903486:-|nuORF	ENST00000564306.5_1_15:65892084-65903486:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.8021850585938	2	569.273418	1136.53228	-0.95834	-0.00054556	3.1172	0.0017745	2.1589	0.001229	569.2750688716659	58.444	0.70973	58.836	58.524	59.234	0.39209					37	16	3	0	0	0	0.20789	1	6094	6094		51.335	16.183	1	499530			39000	4307	25953	25965	44419	44419					-0.030521869671019886
NQRTSRRK	8	Unmodified	_NQRTSRRK_					0	0	0		ENSG00000132740|ENST00000255078|IGHMBP2	ENSG00000132740|ENST00000255078|IGHMBP2	ENSG00000132740|ENST00000255078|IGHMBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3045654296875	2	523.302313	1044.59007	1.1935	0.00062456	1.2756	0.00066754	2.4691	0.0012921	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.88601	1	10624	10624		34.173	1.3601	1	11944000			39001	3824	25954	25966	44420	44420					0.0695611974899748
NQRYTGATD	9	Unmodified	_NQRYTGATD_					0	0	0			REV__ENST00000374787.7_1_9:106857077-106857673:+|nuORF	REV__ENST00000374787.7_1_9:106857077-106857673:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8074340820312	2	513.23597	1024.45739	-1.3752	-0.0007058	3.1291	0.001606	1.7539	0.00090015	513.2371687531482	53.223	0.50964	53.223	52.948	53.458	0					18	13	2	0	0	0	0.20789	1	4437	4437		32.812	0	1	45008	+		39002	25795	25955	25967	44421	44421					-0.05386369498341992
NQSDPPVGVI	10	Unmodified	_NQSDPPVGVI_					0	0	0			REV__ENSG00000248144|ENST00000515683|ADH1C	REV__ENSG00000248144|ENST00000515683|ADH1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.2653198242188	2	513.266739	1024.51892	0.46405	0.00023818	-1.0453	-0.00053651	-0.58124	-0.00029833	513.2660016412625	50.87	0.66415	51.305	50.994	51.659	0.43505					24	15	2	0	0	0	0.80179	1	5030	5030		39.253	0.44669	1	448560	+		39003	22943	25956	25968	44422	44422					0.007645622009476938
NQSFNNFMLRI	11	Unmodified	_NQSFNNFMLRI_					0	0	0		ENSG00000138031|ENST00000679454|ADCY3;nc|ENSG00000138031|O60266-2|ADCY3;ENST00000485887.1_1_2:25043436-25046221:-|nuORF	ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.9483642578125	3	461.899445	1382.6765	0.76529	0.00035349	3.4011	0.001571	4.1664	0.0019245	461.90108188053847	107.77	0.24754	107.86	107.63	107.88	0.091255					6	5	2	0	0	0	0.17289	1	11560	11560		41.08	22.114	1	72488			39004	4257	25957	25969	44423	44423					0.0004731846868253342
NQSITINQLL	10	Unmodified	_NQSITINQLL_					0	0	0			REV__ENSG00000133640|ENST00000393217|LRRIQ1	REV__ENSG00000133640|ENST00000393217|LRRIQ1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.3311767578125	2	572.322045	1142.62954	-1.3795	-0.00078954	-4.3881	-0.0025114	-5.7676	-0.0033009	572.3196943279864	102.17	0.79694	102.31	102.1	102.9	0.13569					22	19	2	0	0	0	0.37624	1	10658	10658		11.097	0	1	69181	+		39005	19087	25958	25970	44424	44424					0.06392782189186619
NQSKIVLHVTL	11	Unmodified	_NQSKIVLHVTL_					0	0	0			REV__ENSG00000188021|ENST00000338222|UBQLN2	REV__ENSG00000188021|ENST00000338222|UBQLN2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.0376586914062	2	626.374612	1250.73467	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.764	1	53.701	53.201	54.201	-0.062065								0	0	0	0.56276	1	4415	4415		19.104	0.84144	1		+		39006	22969	25959	25971	44425	44425					0.1193332338559685
NQSKPLIPLQK	11	Unmodified	_NQSKPLIPLQK_					0	0	0		nc|ENSG00000112851|Q96RT1-7|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-9|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5888366699219	3	422.590717	1264.75032	1.507	0.00063683	2.8643	0.0012104	4.3713	0.0018473	422.5918242191152	56.954	1.5389	56.988	56.634	58.173	0.033184					128	49	3	0	0	0	0.73277	1	5279	5279		25.892	1.6599	1	319500			39007	14852	25960	25972	44426	44426					0.12853609902640528
NQSPASSYL	9	Unmodified	_NQSPASSYL_					0	0	0		ENSG00000105880|ENST00000648378|DLX5	ENSG00000105880|ENST00000648378|DLX5	ENSG00000105880|ENST00000648378|DLX5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.728759765625	2	483.729989	965.445425	-0.76587	-0.00037047	-1.8588	-0.00089915	-2.6247	-0.0012696	483.72888486758	72.257	0.87394	72.643	72.125	72.999	0.38581					43	20	3	0	0	0	0.74721	1	8057	8057		37.159	1.5408	1	1359000			39008	2261	25961	25973	44427	44427					-0.03867986241516519
NQSPASSYL	9	Unmodified	_NQSPASSYL_					0	0	0		ENSG00000105880|ENST00000648378|DLX5	ENSG00000105880|ENST00000648378|DLX5	ENSG00000105880|ENST00000648378|DLX5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.72845458984375	2	483.729989	965.445425	-0.6886	-0.0003331	-1.9084	-0.00092314	-2.597	-0.0012562	483.72888297691156	73.255	1.0522	73.642	72.877	73.93	0.3878					64	26	3	0	0	0	0.35373	1	8192	8192		60.972	4.2509	1	1404300			39009	2261	25961	25973	44428	44428					-0.03867986241516519
NQSPASSYL	9	Unmodified	_NQSPASSYL_					0	0	0		ENSG00000105880|ENST00000648378|DLX5	ENSG00000105880|ENST00000648378|DLX5	ENSG00000105880|ENST00000648378|DLX5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	483.729989	965.445425	-1.1685	-0.00056523	-1.7455	-0.00084436	-2.914	-0.0014096	483.7288923335282	73.87	0.42879	73.956	73.822	74.251	0.085907	0.20999	0.00036154	NaN	60.972	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114820			39010	2261	25961	25973							-0.03867986241516519
NQSPRGKR	8	Unmodified	_NQSPRGKR_					0	0	0		nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7695007324219	2	471.765032	941.515511	-0.19025	-8.9755E-05	0.25372	0.0001197	0.063467	2.9942E-05	471.7645972207226	52.426	0.787	52.85	52.555	53.342	0.42348					26	18	2	0	0	0	0.4196	1	5212	5212		40.573	10.069	1	348020			39011	2532	25962	25974	44429	44429					0.042413569376208216
NQSRTLGLL	9	Unmodified	_NQSRTLGLL_					0	0	0		ENST00000561370.5_1_14:68048786-68054020:+|nuORF	ENST00000561370.5_1_14:68048786-68054020:+|nuORF	ENST00000561370.5_1_14:68048786-68054020:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2904357910156	2	501.290548	1000.56654	-0.45423	-0.0002277	0.14645	7.3413E-05	-0.30779	-0.00015429	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.67345	1	10180	10180		42.396	0	1	9727400			39012	13833	25963	25975	44430	44430					0.06628261191815454
NQSSSFVAP	9	Unmodified	_NQSSSFVAP_					0	0	0			REV__nc|ENSG00000197448|Q9Y2Q3-2|GSTK1	REV__nc|ENSG00000197448|Q9Y2Q3-2|GSTK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7236022949219	2	468.724707	935.43486	1.545	0.00072417	-4.2552	-0.0019945	-2.7102	-0.0012703	468.7225274565174	99.973	1.2778	100.32	99.78	101.06	0.3473					62	31	3	0	0	0	0.78058	1	12141	12141		30.504	1.3541	1	1356300	+		39013	30137	25964	25976	44431	44431					-0.03543968895939997
NQSVDMPLI	9	Unmodified	_NQSVDMPLI_					0	0	0			REV__ENSG00000180245|ENST00000317735|RRH	REV__ENSG00000180245|ENST00000317735|RRH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.75640869140625	2	508.757692	1015.50083	0.92353	0.00046986	-4.2618	-0.0021682	-3.3382	-0.0016983	508.75538702998495	63.673	1.0094	64.227	63.72	64.729	0.55449					48	23	4	0	0	0	0.64922	1	6889	6889		44.117	3.3386	1	357590	+		39014	22382	25965	25977	44432	44432					-0.006298960453932523
NQSYGGGGSR	10	Unmodified	_NQSYGGGGSR_					0	0	0			REV__chr19:41302949-41303985|20|55.25|0.69|6.33|+|1|HNRNPUL1,None|1	REV__chr19:41302949-41303985|20|55.25|0.69|6.33|+|1|HNRNPUL1,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7215270996094	2	491.720487	981.426421	-0.1309	-6.4365E-05	0.0491	2.4143E-05	-0.081797	-4.0221E-05	491.72046060584375	20.778	0.73014	20.148	19.854	20.585	-0.6296					26	18	2	0	0	0	0.86106	1	689	689		33.922	3.418	1	138150	+		39015	15704	25966	25978	44433	44433					-0.0650352281254527
NQTDLHYVL	9	Unmodified	_NQTDLHYVL_					0	0	0		ENSG00000183150|ENST00000651487|GPR19	ENSG00000183150|ENST00000651487|GPR19	ENSG00000183150|ENST00000651487|GPR19	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.7832641601562	2	551.780013	1101.54547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.371	1	58.405	57.905	58.905	0.033905								0	0	0	0.28772	1	5352	5352		35.618	0.46626	1				39016	7504	25967	25979	44434	44434					-0.0012374890770843194
NQTGFTKH	8	Unmodified	_NQTGFTKH_					0	0	0			REV__ENSG00000198838|ENST00000634891|RYR3	REV__ENSG00000198838|ENST00000634891|RYR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7342834472656	2	466.732866	931.451179	0.23559	0.00010996	2.6598	0.0012414	2.8953	0.0013514	466.7340279976939	23.781	0.81942	23.399	23.018	23.837	-0.38178					38	18	4	0	0	0	0.88601	1	1116	1116		34.173	5.9183	1	358980	+		39017	23393	25968	25980	44435	44435					-0.017288429392010585
NQTIEVTV	8	Unmodified	_NQTIEVTV_					0	0	0			REV__nc|ENSG00000116731|Q13029-5|PRDM2	REV__nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.94329833984375	2	452.242732	902.470912	0.33245	0.00015035	-0.59206	-0.00026776	-0.25962	-0.00011741	452.24246238282507	53.804	0.55703	53.885	53.569	54.126	0.081528					29	13	3	0	0	0	0.4196	1	4388	4388		32.812	8.2932	1	177440	+		39018	18220	25969	25981	44436	44436					0.015774882809068913
NQTLLRKP	8	Unmodified	_NQTLLRKP_					0	0	0			REV__nc|ENSG00000185247|P43364-2|MAGEA11	REV__nc|ENSG00000185247|P43364-2|MAGEA11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.7177734375	2	485.295633	968.576714	0.75675	0.00036725	-0.54159	-0.00026283	0.21516	0.00010442	485.2953224228307	97.185	1.8086	97.348	96.922	98.731	0.16317					53	41	2	0	0	0	0.4196	1	10151	10151		6.7355	0	1	194740	+		39019	22751	25970	25982	44437	44437					0.09116868917044485
NQTMTLLDL	9	Unmodified	_NQTMTLLDL_					0	0	0			REV__ENST00000397473.6_1_13:99908596-99908695:-|nuORF	REV__ENST00000397473.6_1_13:99908596-99908695:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.250244140625	2	524.7708	1047.52705	0.87654	0.00045998	-2.4774	-0.0013	-1.6008	-0.00084006	524.7692470517982	50.393	0.74201	50.841	50.389	51.131	0.44761					29	17	2	0	0	0	0.20789	1	4980	4980		34.173	7.3764	1	450030	+		39020	26166	25971	25983	44438	44438					0.005183731260785862
NQTPHVATSK	10	Unmodified	_NQTPHVATSK_					0	0	0		L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|149|3|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|149|3|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|149|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8244018554688	2	541.783087	1081.55162	0.65923	0.00035716	-0.85315	-0.00046222	-0.19392	-0.00010506	541.7826015478379	33.317	0.75262	33.528	33.313	34.066	0.21168					26	17	2	0	0	0	0.37624	1	2391	2391		23.523	0	1	271270			39021	14671	25972	25984	44439	44439					0.014107693237747299
NQTPPRAPG	9	Unmodified	_NQTPPRAPG_					0	0	0		ENST00000583147.5_1_18:9400357-9400453:+|nuORF	ENST00000583147.5_1_18:9400357-9400453:+|nuORF	ENST00000583147.5_1_18:9400357-9400453:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	469.2423400878906	2	469.246141	936.477728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.383	1	74.428	73.928	74.928	0.04509								0	0	0	0.28772	1	7197	7197		35.618	3.6634	1				39022	14118	25973	25985	44440	44440					0.006948459521368022
NQTTVLILRT	10	Unmodified	_NQTTVLILRT_					0	0	0			REV__nc|ENSG00000176697|P23560-4|BDNF	REV__nc|ENSG00000176697|P23560-4|BDNF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.8435668945312	2	579.845687	1157.67682	0.46014	0.00026681	-3.2581	-0.0018892	-2.7979	-0.0016224	579.8436677237017	102.22	1.1397	102.27	101.85	102.99	0.043198					70	27	3	0	0	0	0.8651	1	11081	11081		25.574	1.0549	1	1168900	+		39023	30053	25974	25986	44441	44441					0.10429061460172306
NQVADRCRI	9	Unmodified	_NQVADRCRI_					0	0	0			REV__ENSG00000138615|ENST00000261883|CILP	REV__ENSG00000138615|ENST00000261883|CILP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.3017578125	2	537.777282	1073.54001	0.060377	3.2469E-05	1.3255	0.00071284	1.3859	0.00074531	538.2795522079065	57.46	0.7107	58.015	57.519	58.23	0.55512					21	17	2	0	0	0	0.20789	1	5920	5920		40.778	19.076	1	209060	+		39024	19482	25975	25987	44442	44442					0.006182490288210829
NQVGYVSC	8	Unmodified	_NQVGYVSC_					0	0	0		ENST00000432176.6_1_7:22984841-22985015:-|nuORF	ENST00000432176.6_1_7:22984841-22985015:-|nuORF	ENST00000432176.6_1_7:22984841-22985015:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.1973571777344	2	435.194728	868.374903	1.4332	0.00062371	3.1889	0.0013878	4.6221	0.0020115	435.19597064479416	100.15	0.74585	100.49	100.14	100.88	0.33295					31	18	2	0	0	0	0.89962	1	12139	12139		38.806	3.6054	1	420750			39025	11661	25976	25988	44443	44443					-0.06454982830825884
NQVLNYVQIL	10	Unmodified	_NQVLNYVQIL_					0	0	0		ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.2521667480469	3	401.895917	1202.66592	-0.39942	-0.00016052	-1.2702	-0.00051049	-1.6696	-0.00067101	401.8951429558401	19.883	0.46712	19.813	19.652	20.119	-0.069735					27	15	3	0	0	0	0.37624	1	500	500		22.58	5.8623	1	60031			39026	4067	25977	25989	44444	44444					0.07269659085909552
NQVLNYVQIL	10	Unmodified	_NQVLNYVQIL_					0	0	0		ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	401.895917	1202.66592	-2.164	-0.00086972	0.027385	1.1006E-05	-2.1367	-0.00085871	401.8957272363346	19.689	0.22647	19.689	19.566	19.792	0	-0.033899	0.0029598	NaN	16.717	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28499			39027	4067	25977	25989							0.07269659085909552
NQVLNYVQIL	10	Unmodified	_NQVLNYVQIL_					0	0	0		ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	401.895917	1202.66592	0.90482	0.00036364	-2.525	-0.0010148	-1.6202	-0.00065114	401.894758128787	19.594	0.39129	19.665	19.421	19.812	0.071127	-0.058348	-0.0001176	NaN	16.717	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45549			39028	4067	25977	25989							0.07269659085909552
NQVLNYVQIL	10	Unmodified	_NQVLNYVQIL_					0	0	0		ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	401.895917	1202.66592	2.8984	0.0011649	-4.3874	-0.0017633	-1.489	-0.00059843	401.8939990738323	19.904	0.37793	19.834	19.657	20.034	-0.070013	0.11073	-0.0023631	NaN	16.717	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63342			39029	4067	25977	25989							0.07269659085909552
NQVLNYVQIL	10	Unmodified	_NQVLNYVQIL_					0	0	0		ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	401.895917	1202.66592	-1.9388	-0.00077921	0.72529	0.00029149	-1.2135	-0.00048772	402.23084159602604	19.737	0.18018	19.78	19.704	19.884	0.043749	0.057389	0.0038012	NaN	16.717	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55757			39030	4067	25977	25989							0.07269659085909552
NQVLNYVQIL	10	Unmodified	_NQVLNYVQIL_					0	0	0		ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	ENSG00000135917|ENST00000644224|SLC19A3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	401.895917	1202.66592	0.45651	0.00018347	-2.9082	-0.0011688	-2.4517	-0.00098533	402.22899821437164	19.676	0.26545	19.653	19.445	19.71	-0.023344	-0.070137	-0.00057966	NaN	16.717	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22082			39031	4067	25977	25989							0.07269659085909552
NQVPNSNNK	9	Unmodified	_NQVPNSNNK_					0	0	0			REV__L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|10|1|sense	REV__L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|10|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.75311279296875	2	507.751787	1013.48902	-0.78055	-0.00039633	3.2546	0.0016525	2.4741	0.0012562	507.75333135770444	62.615	1.2565	63.002	62.534	63.791	0.3878					81	28	4	0	0	0	0.33718	1	6698	6698		62.107	1.1355	1	1463300	+		39032	29507	25978	25990	44445	44445					-0.017183767443839315
NQVQLQNLV	9	Unmodified	_NQVQLQNLV_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.2974853515625	2	528.29583	1054.57711	0.086403	4.5646E-05	3.194	0.0016874	3.2804	0.001733	528.3000491579533	58.705	0.29026	59.258	59.13	59.421	0.55323					10	6	2	0	0	0	0.20789	1	6166	6166		24.203	0	1	129470			39033	720	25979	25991	44446	44446					0.05200243846206831
NQYVNVMNM	9	Unmodified	_NQYVNVMNM_					0	0	0		nc|ENSG00000138079|Q07837-2|SLC3A1;nc|ENSG00000138079|Q07837-5|SLC3A1;nc|ENSG00000138079|Q07837-7|SLC3A1;nc|ENSG00000138079|Q07837-6|SLC3A1;ENSG00000138079|ENST00000260649|SLC3A1;nc|ENSG00000138079|Q07837-4|SLC3A1	nc|ENSG00000138079|Q07837-2|SLC3A1	nc|ENSG00000138079|Q07837-2|SLC3A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	557.2420043945312	2	556.746802	1111.47905	-0.118	-6.5695E-05	0.17249	9.6032E-05	0.054488	3.0336E-05	556.7467407236841	22.078	0.53172	21.467	21.25	21.782	-0.6107					22	13	3	0	0	0	0.20789	1	849	849		17.365	5.8539	1	170830			39034	4266	25980	25992	44447	44447					-0.07223024065638128
NRAAHLSA	8	Unmodified	_NRAAHLSA_					0	0	0		chr17:59738947-59754759|31|15.9|0.3|5.74|+|2|VMP1,None|1	chr17:59738947-59754759|31|15.9|0.3|5.74|+|2|VMP1,None|1	chr17:59738947-59754759|31|15.9|0.3|5.74|+|2|VMP1,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2273864746094	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.87922	1	7563	7563		31.955	0	1	743780			39035	235	25981	25993	44448	44448					0.015265941262100569
NRAFKKPVF	9	Unmodified	_NRAFKKPVF_					0	0	0		ENSG00000165490|ENST00000533655|DDIAS	ENSG00000165490|ENST00000533655|DDIAS	ENSG00000165490|ENST00000533655|DDIAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8302001953125	2	553.827101	1105.63965	1.7761	0.00098364	3.5243	0.0019519	5.3004	0.0029355	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.72402	1	9158	9158		38.806	4.6336	1	1628400			39036	6086	25982	25994	44449	44449					0.09105434705065818
NRALDIFN	8	Unmodified	_NRALDIFN_					0	0	0		nc|ENSG00000172548|Q0D2K0-2|NIPAL4;ENSG00000172548|ENST00000311946|NIPAL4;nc|ENSG00000140157|Q8N8Q9-2|NIPA2;ENSG00000140157|ENST00000337451|NIPA2	nc|ENSG00000172548|Q0D2K0-2|NIPAL4	nc|ENSG00000172548|Q0D2K0-2|NIPAL4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.75531005859375	2	481.756341	961.498129	-1.4795	-0.00071278	1.9304	0.00093	0.4509	0.00021722	481.7570239648171	57.421	0.72549	57.421	57.132	57.857	0					69	29	3	0	0	0	0.86677	1	4955	4955		27.882	2.3082	1	340950			39037	6776	25983	25995	44450	44450					0.015840166119460264
NRAPIVEKPLG	11	Unmodified	_NRAPIVEKPLG_					0	0	0			REV__ENST00000298139.5_1_8:31030517-31030583:+|nuORF	REV__ENST00000298139.5_1_8:31030517-31030583:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3566284179688	2	597.35368	1192.69281	2.4166	0.0014436	0.49195	0.00029387	2.9086	0.0017374	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.74022	1	10066	10066		24.232	2.5461	1	8047600	+		39038	24729	25984	25996	44451	44451					0.10416767697074647
NRAVFKKKN	9	Unmodified	_NRAVFKKKN_					0	0	0		ENST00000344756.8_1_7:155100385-155100712:+|nuORF	ENST00000344756.8_1_7:155100385-155100712:+|nuORF	ENST00000344756.8_1_7:155100385-155100712:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3075561523438	2	552.835457	1103.65636	0.68182	0.00037694	-3.3533	-0.0018538	-2.6715	-0.0014769	552.833729645004	81.596	1.1693	81.74	81.116	82.286	0.14352					43	26	2	0	0	0	0.20789	1	7743	7743		38.806	15.764	1	105600			39039	10297	25985	25997	44452	44452					0.10867935591022615
NRAVFKKKN	9	Unmodified	_NRAVFKKKN_					0	0	0		ENST00000344756.8_1_7:155100385-155100712:+|nuORF	ENST00000344756.8_1_7:155100385-155100712:+|nuORF	ENST00000344756.8_1_7:155100385-155100712:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	552.835457	1103.65636	-0.72597	-0.00040134	-1.7476	-0.00096615	-2.4736	-0.0013675	552.8345101492772	81.858	1.0349	81.922	81.491	82.526	0.064384	0.10072	0.00031429	NaN	38.806	41	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72218			39040	10297	25985	25997							0.10867935591022615
NRAVFKKKN	9	Unmodified	_NRAVFKKKN_					0	0	0		ENST00000344756.8_1_7:155100385-155100712:+|nuORF	ENST00000344756.8_1_7:155100385-155100712:+|nuORF	ENST00000344756.8_1_7:155100385-155100712:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	552.835457	1103.65636	0.24815	0.00013718	-2.8187	-0.0015583	-2.5705	-0.0014211	552.8339233467976	81.566	1.1393	81.711	81.275	82.414	0.14513	-0.11005	-0.00086992	NaN	38.806	45	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122410			39041	10297	25985	25997							0.10867935591022615
NRAVLAPP	8	Unmodified	_NRAVLAPP_					0	0	0			REV__ENSG00000072071|ENST00000361434|ADGRL1	REV__ENSG00000072071|ENST00000361434|ADGRL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7749328613281	2	419.250695	836.486836	-1.1927	-0.00050005	3.8256	0.0016039	2.6329	0.0011038	419.2546973346978	42.505	0.82287	42.467	42.103	42.926	-0.038223					32	19	3	0	0	0	0.4196	1	3247	3247		37.028	25.517	1	53004	+		39042	16636	25986	25998	44453	44453					0.062052393084513824
NRAVLNLGT	9	Unmodified	_NRAVLNLGT_					0	0	0			REV__nc|ENSG00000164053|Q8WXE1-5|ATRIP	REV__nc|ENSG00000164053|Q8WXE1-5|ATRIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2779235839844	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.76255	1	8098	8098		35.618	5.3006	1	2046100	+		39043	21017	25987	25999	44454	44454					0.06031992020314192
NRCACCCSP	9	Unmodified	_NRCACCCSP_					0	0	0		ENST00000564313.1_1_16:2141057-2141975:-|nuORF	ENST00000564313.1_1_16:2141057-2141975:-|nuORF	ENST00000564313.1_1_16:2141057-2141975:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.66387939453125	2	478.6639	955.313247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.269	1	70.816	70.316	71.316	0.54693								0	0	0	0.3465	1	7813	7813		15.642	0.3087	1				39044	13884	25988	26000	44455	44455					-0.16619697117641863
NRCLVAQV	8	Unmodified	_NRCLVAQV_					0	0	0			REV__ENSG00000183977|ENST00000389050|PP2D1	REV__ENSG00000183977|ENST00000389050|PP2D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7482604980469	2	451.747462	901.480371	-0.010196	-4.6062E-06	-4.2008	-0.0018977	-4.211	-0.0019023	451.7456051590094	33.34	1.2132	33.338	32.979	34.193	-0.0016365					54	27	3	0	0	0	0.884	1	2046	2046		33.516	1.5607	1	302940	+		39045	22640	25989	26001	44456	44456					0.02568978085434992
NRDKYLIRH	9	Unmodified	_NRDKYLIRH_					0	0	0			REV__ENST00000599510.1_1_19:49299609-49300643:-|nuORF	REV__ENST00000599510.1_1_19:49299609-49300643:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.8998107910156	3	405.563273	1213.66799	-0.96961	-0.00039324	4.3921	0.0017813	3.4225	0.001388	405.5649330615565	61.08	0.45033	61.089	60.713	61.164	0.0081177					29	17	2	0	0	0	0.7932	1	5322	5322		17.468	0	1	354150	+		39046	17551	25990	26002	44457	44457					0.06970132614355862
NRELLWHGF	9	Unmodified	_NRELLWHGF_					0	0	0		ENSG00000164751|ENST00000357039|PEX2	ENSG00000164751|ENST00000357039|PEX2	ENSG00000164751|ENST00000357039|PEX2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.426513671875	2	586.30399	1170.59343	0.49672	0.00029123	-0.48057	-0.00028176	0.016149	9.4683E-06	586.3033742424894	92.285	0.42802	92.732	92.519	92.947	0.44661					12	9	2	0	0	0	0.20789	1	10992	10992		33.516	0	1	39795			39047	6001	25991	26003	44458	44458					0.014953698030012674
NRELVQLIKR	10	Unmodified	_NRELVQLIKR_					0	0	0			REV__nc|ENSG00000110723|Q8NEV8-2|EXPH5	REV__nc|ENSG00000110723|Q8NEV8-2|EXPH5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8930053710938	2	634.893503	1267.77245	1.9684	0.0012497	-3.4658	-0.0022004	-1.4974	-0.00095071	634.8913842364989	105.48	2.7267	105.63	104.93	107.65	0.15583					244	94	5	0	0	0	0.8608	1	12842	12842		34.173	2.6427	1	2461800	+		39048	17829	25992	26004	44459	44459					0.1492783437106482
NREPDFSSL	9	Unmodified	_NREPDFSSL_					0	0	0		nc|ENSG00000100918|O95072-2|REC8;ENSG00000100918|ENST00000611366|REC8	nc|ENSG00000100918|O95072-2|REC8	nc|ENSG00000100918|O95072-2|REC8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8167114257812	2	532.753995	1063.49344	-0.70469	-0.00037543	-3.9701	-0.0021151	-4.6747	-0.0024905	532.7517921633702	86.249	0.52611	86.702	86.45	86.976	0.45233					21	12	2	0	0	0	0.20789	1	10112	10112		19.997	1.6724	1	207660			39049	1884	25993	26005	44460	44460					-0.03576912321477721
NRESDRTPLH	10	Unmodified	_NRESDRTPLH_					0	0	0		ENST00000605901.1_1_6:2988904-2989938:+|nuORF	ENST00000605901.1_1_6:2988904-2989938:+|nuORF	ENST00000605901.1_1_6:2988904-2989938:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.7397155761719	3	408.874175	1223.6007	1.3474	0.00055091	1.4001	0.00057248	2.7475	0.0011234	408.8744526242615	35.763	0.33651	36.203	35.922	36.259	0.44043					13	8	2	0	0	0	0.37624	1	2782	2782		41.427	2.673	1	81614			39050	14440	25994	26006	44461	44461					-0.002159423872399202
NREYYRDYDRW	11	Unmodified	_NREYYRDYDRW_					0	0	0			REV__ENSG00000091009|ENST00000265271|RBM27	REV__ENSG00000091009|ENST00000265271|RBM27	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.2482299804688	3	545.914811	1634.7226	-1.6017	-0.00087437	-0.77196	-0.00042142	-2.3736	-0.0012958	546.2485727659065	25.865	0.46053	25.865	25.691	26.151	0					42	20	3	0	0	0	0.85873	1	977	977		5.4129	1.7939	1	73372	+		39051	17003	25995	26007	44462	44462					-0.06936945095549163
NREYYRDYDRW	11	Unmodified	_NREYYRDYDRW_					0	0	0			REV__ENSG00000091009|ENST00000265271|RBM27	REV__ENSG00000091009|ENST00000265271|RBM27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.2477416992188	3	545.914811	1634.7226	0.30034	0.00016396	-3.1958	-0.0017446	-2.8954	-0.0015807	545.9130307681771	25.932	0.52524	25.978	25.732	26.257	0.045509					41	17	3	0	0	0	0.79716	1	1056	1056		11.932	8.3133	1	70210	+		39052	17003	25995	26007	44463	44463					-0.06936945095549163
NREYYRDYDRW	11	Unmodified	_NREYYRDYDRW_					0	0	0			REV__ENSG00000091009|ENST00000265271|RBM27	REV__ENSG00000091009|ENST00000265271|RBM27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.9144287109375	3	545.914811	1634.7226	0.45505	0.00024842	-3.2116	-0.0017532	-2.7565	-0.0015048	545.9131161480681	25.997	0.72197	25.959	25.614	26.336	-0.038607					41	16	4	0	0	0	0.86672	1	1131	1131		4.8861	1.4774	1	82289	+		39053	17003	25995	26007	44464	44464					-0.06936945095549163
NRFKFLKD	8	Unmodified	_NRFKFLKD_					0	0	0			REV__nc|ENSG00000095713|Q9NQ79-3|CRTAC1	REV__nc|ENSG00000095713|Q9NQ79-3|CRTAC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.3034057617188	2	534.303458	1066.59236	-0.31695	-0.00016935	-0.75838	-0.00040521	-1.0753	-0.00057455	534.3029107286292	76.827	0.6277	77.395	77.077	77.704	0.56836					32	19	2	0	0	0	0.90465	1	8748	8748		40.573	6.4001	1	594010	+		39054	17067	25996	26008	44465	44465					0.06173155434112232
NRFKKKAEAR	10	Unmodified	_NRFKKKAEAR_					0	0	0			REV__ENSG00000129521|ENST00000250457|EGLN3	REV__ENSG00000129521|ENST00000250457|EGLN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	624.8765258789062	2	624.370195	1246.72584	-0.063393	-3.958E-05	0.43297	0.00027034	0.36958	0.00023076	624.8723580953412	103.7	0.7278	103.7	103.47	104.2	0					26	17	2	0	0	0	0.86763	1	10642	10642		26.693	1.1189	1	657170	+		39055	18824	25997	26009	44466	44466					0.1123439453976971
NRFRDDDY	8	Unmodified	_NRFRDDDY_					0	0	0		ENSG00000152377|ENST00000394945|SPOCK1	ENSG00000152377|ENST00000394945|SPOCK1	ENSG00000152377|ENST00000394945|SPOCK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.2467041015625	2	550.741419	1099.46829	-0.33549	-0.00018477	3.6074	0.0019868	3.2719	0.001802	550.7432259427051	53.258	0.53857	53.872	53.572	54.111	0.61436					27	12	3	0	0	0	0.91977	1	5368	5368		45.952	6.6991	1	549140			39056	5170	25998	26010	44467	44467					-0.07746967124057846
NRFRDDDY	8	Unmodified	_NRFRDDDY_					0	0	0		ENSG00000152377|ENST00000394945|SPOCK1	ENSG00000152377|ENST00000394945|SPOCK1	ENSG00000152377|ENST00000394945|SPOCK1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	550.741419	1099.46829	-0.46589	-0.00025659	3.375	0.0018587	2.9091	0.0016022	550.7431566733836	53.465	0.66146	53.879	53.622	54.284	0.4139	0.0035992	-6.9026E-05	NaN	45.952	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	475290			39057	5170	25998	26010							-0.07746967124057846
NRFRLNKK	8	Unmodified	_NRFRLNKK_					0	0	0		ENST00000606893.5_1_6:110533295-110551331:+|nuORF;ENSG00000168438|ENST00000307731|CDC40	ENST00000606893.5_1_6:110533295-110551331:+|nuORF	ENST00000606893.5_1_6:110533295-110551331:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3274536132812	2	538.327799	1074.64105	-1.4902	-0.00080221	0.37298	0.00020079	-1.1172	-0.00060142	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.80706	1	12825	12825		19.36	1.995	1	4041000			39058	6400	25999	26011	44468	44468					0.1067106879381754
NRGLIVPTRAK	11	Unmodified	_NRGLIVPTRAK_					0	0	0			REV__ENST00000461448.5_1_1:28905087-28906119:-|nuORF	REV__ENST00000461448.5_1_1:28905087-28906119:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9221496582031	3	408.922689	1223.74624	-1.9234	-0.00078652	0.84702	0.00034637	-1.0764	-0.00044016	408.9230151046432	104.46	2.832	104.56	103.59	106.42	0.093857					212	70	5	0	0	0	0.73893	1	11033	11033		16.53	0	1	2027500	+		39059	27030	26000	26012	44469	44469					0.14331565199586294
NRGLRGRDY	9	Unmodified	_NRGLRGRDY_					0	0	0			REV__nc|ENSG00000132481|Q96LD4-2|TRIM47	REV__nc|ENSG00000132481|Q96LD4-2|TRIM47	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2940673828125	2	553.794321	1105.57409	-1.1091	-0.00061423	2.2799	0.0012626	1.1708	0.00064838	553.7962542953013	71.908	1.7842	72.293	71.504	73.288	0.38519					127	42	6	0	0	0	0.76255	1	7975	7975		35.618	1.4457	1	1264400	+		39060	19008	26001	26013	44470	44470					0.025524135121031577
NRGPSHQDG	9	Unmodified	_NRGPSHQDG_					0	0	0			REV__nc|ENSG00000133816|O94851|MICAL2	REV__nc|ENSG00000133816|O94851|MICAL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.2379150390625	2	484.220654	966.426755	0.65005	0.00031477	1.1897	0.00057607	1.8397	0.00089084	484.2214858152078	85.517	0.38623	85.665	85.558	85.944	0.14857					9	8	2	0	0	0	0.20789	1	8360	8360		54.776	0	1	58058	+		39061	29854	26002	26014	44471	44471					-0.057801030927180364
NRGRLIGG	8	Unmodified	_NRGRLIGG_					0	0	0		ENSG00000036448|ENST00000262113|MYOM2;ENST00000520779.1_1_8:2088796-2113099:+|nuORF	ENSG00000036448|ENST00000262113|MYOM2	ENSG00000036448|ENST00000262113|MYOM2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.75213623046875	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.607	1	77.699	77.199	78.199	0.091438								0	0	0	0.30004	1	7258	7258		21.702	0	1				39062	902	26003	26015	44472	44472					0.06114873397245901
NRGRLLCMLAL	11	Unmodified	_NRGRLLCMLAL_					0	0	0		ENSG00000170385|ENST00000367001|SLC30A1	ENSG00000170385|ENST00000367001|SLC30A1	ENSG00000170385|ENST00000367001|SLC30A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	630.86474609375	2	630.357385	1258.70022	0.25322	0.00015962	1.7237	0.0010866	1.9769	0.0012462	630.3583530121006	46.98	0.70532	46.976	46.637	47.342	-0.0041618					36	17	3	0	0	0	0.71207	1	3854	3854		19.997	6.5427	1	254870			39063	6582	26004	26016	44473	44473					0.08121460701522665
NRGVIVNH	8	Unmodified	_NRGVIVNH_					0	0	0			REV__ENSG00000108055|ENST00000361804|SMC3	REV__ENSG00000108055|ENST00000361804|SMC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.60943603515625	2	454.756675	907.498798	-0.1187	-5.398E-05	3.6769	0.0016721	3.5582	0.0016181	454.75816351918223	67.16	0.55625	67.546	67.352	67.908	0.38515					23	15	2	0	0	0	0.4196	1	7366	7366		28.254	9.9299	1	237980	+		39064	17692	26005	26017	44474	44474					0.041348560516553334
NRHFNKAK	8	Unmodified	_NRHFNKAK_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.78472900390625	2	507.783225	1013.5519	1.1228	0.00057015	2.1573	0.0010955	3.2801	0.0016656	507.7842156196741	16.847	0.61078	16.236	16.048	16.659	-0.6107					30	13	3	0	0	0	0.93529	1	192	192		52.299	2.8576	1	1020700			39065	7954	26006	26018	44475	44475					0.045662338343163356
NRHVIASV	8	Unmodified	_NRHVIASV_					0	0	0		ENST00000307851.8_1_5:156513872-156514058:-|nuORF	ENST00000307851.8_1_5:156513872-156514058:-|nuORF	ENST00000307851.8_1_5:156513872-156514058:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.2587585449219	2	448.259051	894.503549	1.4362	0.00064381	-1.3421	-0.00060159	0.09419	4.2221E-05	448.25829457253	89.934	3.412	89.982	87.811	91.223	0.048157					180	81	5	0	0	0	0.85277	1	9314	9314		25.45	2.4077	1	2959200			39066	9878	26007	26019	44476	44476					0.05207740194430244
NRHVLSTG	8	Unmodified	_NRHVLSTG_					0	0	0			REV__ENST00000377716.6_1_9:37903591-37903951:-|nuORF	REV__ENST00000377716.6_1_9:37903591-37903951:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2405700683594	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.92973	1	8378	8378		50.025	11.218	1	1244000	+		39067	25872	26008	26020	44477	44477					0.021228632977113193
NRHVLSTG	8	Unmodified	_NRHVLSTG_					0	0	0			REV__ENST00000377716.6_1_9:37903591-37903951:-|nuORF	REV__ENST00000377716.6_1_9:37903591-37903951:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2407531738281	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.90465	1	7686	7686		40.573	1.7665	1	968500	+		39068	25872	26008	26020	44478	44478					0.021228632977113193
NRIDLVKYYI	10	Unmodified	_NRIDLVKYYI_					0	0	0		nc|ENSG00000186908|Q8IUH5-3|ZDHHC17;nc|ENSG00000186908|Q8IUH5-2|ZDHHC17;ENST00000546778.5_1_12:77157996-77214864:+|nuORF;ENSG00000186908|ENST00000426126|ZDHHC17	nc|ENSG00000186908|Q8IUH5-3|ZDHHC17	nc|ENSG00000186908|Q8IUH5-3|ZDHHC17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.871826171875	2	648.869163	1295.72377	-0.0025716	-1.6686E-06	4.319	0.0028025	4.3164	0.0028008	648.8719439244529	99.494	2.1461	99.535	98.831	100.98	0.041107					134	49	3	0	0	0	0.8545	1	10607	10607		36.447	1.2947	1	250130			39069	7827	26009	26021	44479	44479					0.08773921011311359
NRIGKMKLRQL	11	Unmodified	_NRIGKMKLRQL_					0	0	0			REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.9485168457031	3	452.946729	1355.81836	-0.13654	-6.1846E-05	3.8002	0.0017213	3.6636	0.0016594	452.9483614950571	107.37	0.93114	107.33	106.73	107.66	-0.034409					72	21	5	0	0	0	0.74405	1	11698	11698		23.378	0	1	2765200	+		39070	16757	26010	26022	44480	44480					0.1546815628166769
NRIGKMKLRQL	11	Unmodified	_NRIGKMKLRQL_					0	0	0			REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.9485168457031	3	452.946729	1355.81836	-0.13662	-6.1882E-05	3.0274	0.0013713	2.8908	0.0013094	452.9480465279169	107.9	0.27702	107.86	107.61	107.89	-0.042404					16	6	3	0	0	0	0.71803	1	11742	11742		28.577	5.1988	1	4158800	+		39071	16757	26010	26022	44481	44481					0.1546815628166769
NRIGKMKLRQL	11	Unmodified	_NRIGKMKLRQL_					0	0	0			REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.94842529296875	3	452.946729	1355.81836	2.7606	0.0012504	0.90308	0.00040905	3.6637	0.0016595	452.94702271290186	107.29	1.0208	107.26	106.62	107.64	-0.034134					78	23	5	0	0	0	0.71803	2	11903	11891;11903		28.577	9.1129	1	3060000	+		39072	16757	26010	26022	44482;44483	44483					0.1546815628166769
NRIGKMKLRQL	11	Unmodified	_NRIGKMKLRQL_					0	0	0			REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.9482116699219	3	452.946729	1355.81836	1.1592	0.00052504	2.4878	0.0011268	3.6469	0.0016519	452.947744260499	107.13	1.326	107.16	106.32	107.65	0.035622					97	30	5	0	0	0	0.71803	2	11815	11733;11815		28.577	1.4654	1	2905000	+		39073	16757	26010	26022	44484;44485	44485					0.1546815628166769
NRIGKMKLRQL	11	Unmodified	_NRIGKMKLRQL_					0	0	0			REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.94842529296875	3	452.946729	1355.81836	1.1576	0.00052434	2.4364	0.0011036	3.594	0.0016279	452.94782249291245	107.87	0.41002	107.9	107.56	107.97	0.035614					33	9	5	0	0	0	0.72374	1	11845	11845		27.644	1.7522	1	5036700	+		39074	16757	26010	26022	44486	44486					0.1546815628166769
NRIGKMKLRQL	11	Unmodified	_NRIGKMKLRQL_					0	0	0			REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	REV__ENST00000591865.1_1_18:44423974-44424793:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.9480895996094	3	452.946729	1355.81836	-1.1932	-0.00054047	4.4156	0.002	3.2224	0.0014596	452.9486366147782	106.8	1.2296	106.95	106.47	107.7	0.14843					124	29	6	0	0	0	0.67762	1	11426	11426		35.178	1.0917	1	8171700	+		39075	16757	26010	26022	44487	44487					0.1546815628166769
NRIGNKLPPEK	11	Unmodified	_NRIGNKLPPEK_					0	0	0		nc|ENSG00000074356|Q53F19-2|NCBP3;ENSG00000074356|ENST00000389005|NCBP3	nc|ENSG00000074356|Q53F19-2|NCBP3	nc|ENSG00000074356|Q53F19-2|NCBP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3685913085938	2	633.369861	1264.72517	1.4675	0.00092945	-2.7221	-0.0017241	-1.2546	-0.00079462	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.69071	1	9839	9839		30.318	18.111	1	5460600			39076	1306	26011	26023	44488	44488					0.1033955510006308
NRIHTSAH	8	Unmodified	_NRIHTSAH_					0	0	0		ENSG00000184650|ENST00000328248|ODF4	ENSG00000184650|ENST00000328248|ODF4	ENSG00000184650|ENST00000328248|ODF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.24365234375	2	468.243932	934.473312	-0.76236	-0.00035697	3.6331	0.0017012	2.8707	0.0013442	468.24549296496195	47.46	2.028	47.434	46.94	48.968	-0.026737					112	56	3	0	0	0	0.9295	1	3919	3919		55.504	18.345	1	1887700			39077	7634	26012	26024	44489	44489					0.003453815292118634
NRILMSLVLPL	11	Unmodified	_NRILMSLVLPL_					0	0	0			REV__ENSG00000114374|ENST00000338981|USP9Y	REV__ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.59796142578125	3	423.596814	1267.76861	0.73411	0.00031097	1.1664	0.00049407	1.9005	0.00080503	423.59723125055814	105.63	2.8345	105.73	105.02	107.86	0.10765					213	69	5	0	0	0	0.75921	1	11342	11342		29.551	13.021	1	8035700	+		39078	18042	26013	26025	44490	44490					0.1454402855299577
NRIPGPSQ	8	Unmodified	_NRIPGPSQ_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;nc|ENSG00000160305|Q14689-3|DIP2A;nc|ENSG00000160305|Q14689-2|DIP2A;nc|ENSG00000160305|Q14689-4|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.1960754394531	2	434.735409	867.456264	0.38658	0.00016806	-0.050111	-2.1785E-05	0.33647	0.00014628	434.73515330275	24.068	0.38879	23.686	23.449	23.837	-0.38178					13	8	2	0	0	0	0.4196	1	1140	1140		23.042	0	1	27867			39079	5578	26014	26026	44491	44491					0.017234609234265008
NRISIGPLY	9	Unmodified	_NRISIGPLY_					0	0	0			REV__ENSG00000112144|ENST00000676107|CILK1	REV__ENSG00000112144|ENST00000676107|CILK1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3453979492188	2	516.795466	1031.57638	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.71	1	114.7	114.2	115.2	-0.0093994								0	0	0	0.34932	1	13831	13831		14.865	0.20078	1		+		39080	17918	26015	26027	44492	44492					0.06185449197187154
NRITAIFREQG	11	Unmodified	_NRITAIFREQG_					0	0	0		MER11B_dup109|chr4:246912-248001:-|1.1537234201781927|0.0844565193760445|3.77|63.0|17|2|sense	MER11B_dup109|chr4:246912-248001:-|1.1537234201781927|0.0844565193760445|3.77|63.0|17|2|sense	MER11B_dup109|chr4:246912-248001:-|1.1537234201781927|0.0844565193760445|3.77|63.0|17|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7806091308594	3	435.573837	1303.69968	-1.3346	-0.0005813	-0.057917	-2.5227E-05	-1.3925	-0.00060652	435.57369575758815	41.459	0.69012	42.093	41.778	42.468	0.6339					39	18	3	0	0	0	0.17289	1	3633	3633		27.644	5.8635	1	1739100			39081	14706	26016	26028	44493	44493					0.05998080577660403
NRIVSSKYT	9	Unmodified	_NRIVSSKYT_					0	0	0		ENSG00000101974|ENST00000682941|ATP11C;nc|ENSG00000101974|Q8NB49|ATP11C;nc|ENSG00000101974|Q8NB49-2|ATP11C;nc|ENSG00000101974|Q8NB49-3|ATP11C;ENST00000459908.5_1_13:113439469-113512287:+|nuORF;nc|ENSG00000101974|Q8NB49-4|ATP11C;ENSG00000068650|ENST00000375645|ATP11A	ENSG00000101974|ENST00000682941|ATP11C;nc|ENSG00000101974|Q8NB49-4|ATP11C;ENSG00000068650|ENST00000375645|ATP11A	nc|ENSG00000101974|Q8NB49-4|ATP11C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	534.2944946289062	2	534.29583	1066.57711	-0.013223	-7.0649E-06	-2.2633	-0.0012093	-2.2765	-0.0012163	534.294557708472	88.396	3.5338	88.603	87.204	90.738	0.20731					156	83	2	0	0	0	0.67345	1	8792	8792		42.396	5.9494	1	498070			39082	1976;14823;1202	26017	26029	44494	44494					0.04648243846236255
NRKAGAPVG	9	Unmodified	_NRKAGAPVG_					0	0	0			REV__ENSG00000153684|ENST00000526619|GOLGA8F	REV__ENSG00000153684|ENST00000526619|GOLGA8F	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2515563964844	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.76402	3	7360	7360;7405;7582		35.201	8.4046	1	1788100	+		39083	20353	26018	26030	44495;44496;44497	44495					0.04839453677379879
NRKAGAPVG	9	Unmodified	_NRKAGAPVG_					0	0	0			REV__ENSG00000153684|ENST00000526619|GOLGA8F	REV__ENSG00000153684|ENST00000526619|GOLGA8F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2513122558594	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.7932	1	8114	8114		25.45	0	1	3292300	+		39084	20353	26018	26030	44498	44498					0.04839453677379879
NRKAGAPVG	9	Unmodified	_NRKAGAPVG_					0	0	0			REV__ENSG00000153684|ENST00000526619|GOLGA8F	REV__ENSG00000153684|ENST00000526619|GOLGA8F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2514953613281	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.78851	1	7623	7623		28.254	1.4582	1	2494100	+		39085	20353	26018	26030	44499	44499					0.04839453677379879
NRKERLINIL	10	Unmodified	_NRKERLINIL_					0	0	0			REV__ENST00000558123.5_1_15:41648320-41650442:+|nuORF	REV__ENST00000558123.5_1_15:41648320-41650442:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	423.5976867675781	3	423.598094	1267.77245	-0.96194	-0.00040747	0.13168	5.5777E-05	-0.83026	-0.0003517	423.59805160624353	105.99	2.401	105.99	105.33	107.73	0					158	55	4	0	0	0	0.85694	1	10959	10959		20.837	1.5745	1	1845700	+		39086	28728	26019	26031	44500	44500					0.14927834371110293
NRKEWKKLGIR	11	Unmodified	_NRKEWKKLGIR_					0	0	0			REV__ENST00000591531.1_1_19:37264270-37264402:+|nuORF	REV__ENST00000591531.1_1_19:37264270-37264402:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6241455078125	3	476.624643	1426.8521	-1.6911	-0.000806	-0.59192	-0.00028212	-2.283	-0.0010881	476.6241802064395	112.47	0.71533	112.44	112.25	112.96	-0.032333					34	19	2	0	0	0	0.84494	1	12007	12007		6.3209	0	1	354050	+		39087	29197	26020	26032	44501	44501					0.15574901045056322
NRKEWKKLGIR	11	Unmodified	_NRKEWKKLGIR_					0	0	0			REV__ENST00000591531.1_1_19:37264270-37264402:+|nuORF	REV__ENST00000591531.1_1_19:37264270-37264402:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62353515625	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.80813	1	12641	12641		9.6461	0	1	2577100	+		39088	29197	26020	26032	44502	44502					0.15574901045056322
NRKGRTRTT	9	Unmodified	_NRKGRTRTT_					0	0	0			REV__nc|ENSG00000067445|Q12816-2|TRO	REV__nc|ENSG00000067445|Q12816-2|TRO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3168334960938	2	545.31542	1088.61629	-1.4651	-0.00079892	3.746	0.0020427	2.2809	0.0012438	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.72402	1	8795	8795		38.806	1.647	1	4998200	+		39089	16543	26021	26033	44503	44503					0.07552388920453268
NRKKILKEMTN	11	Unmodified	_NRKKILKEMTN_					0	0	0			REV__ENST00000547020.1_1_12:53877089-53877236:-|nuORF	REV__ENST00000547020.1_1_12:53877089-53877236:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.2568664550781	3	458.934378	1373.7813	-0.11864	-5.4449E-05	2.8962	0.0013291	2.7775	0.0012747	459.27021757533174	74.245	0.58652	74.804	74.455	75.042	0.55891					18	13	2	0	0	0	0.17586	1	8404	8404		21.78	9.3476	1	84750	+		39090	19555	26022	26034	44504	44504					0.10936439945248821
NRKKPSPS	8	Unmodified	_NRKKPSPS_					0	0	0			REV__ENST00000488830.6_1_2:175495242-175495311:-|nuORF	REV__ENST00000488830.6_1_2:175495242-175495311:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2637939453125	2	457.264333	912.514114	-0.11988	-5.4815E-05	0.13028	5.9574E-05	0.010409	4.7595E-06	457.26428644836	79.385	2.7838	79.935	78.442	81.226	0.54945					170	65	4	0	0	0	0.92457	1	9125	9125		47.916	10.104	1	1064700	+		39091	27606	26023	26035	44505	44505					0.05435722848858404
NRKKTPVPAM	10	Unmodified	_NRKKTPVPAM_					0	0	0			REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.3316040039062	2	571.32915	1140.64375	-1.1055	-0.00063161	4.4895	0.002565	3.384	0.0019334	571.3317125893625	102.4	2.1601	102.42	101.65	103.81	0.01989					122	52	4	0	0	0	0.80179	1	11012	11012		39.253	13.679	1	2384600	+		39092	17719	26024	26036	44506	44506					0.07905156136484948
NRKLAATLDL	10	Unmodified	_NRKLAATLDL_					0	0	0			REV__ENSG00000130035|ENST00000252318|GALNT8	REV__ENSG00000130035|ENST00000252318|GALNT8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.8299560546875	2	557.83258	1113.65061	0.35884	0.00020017	-3.5133	-0.0019598	-3.1545	-0.0017597	557.8305500141807	100.81	1.6091	101.01	100.54	102.15	0.2058					76	38	3	0	0	0	0.8608	1	10583	10583		34.173	0	1	1006700	+		39093	18841	26025	26037	44507	44507					0.09832792288693781
NRKLGPGAG	9	Unmodified	_NRKLGPGAG_					0	0	0		nc|ENSG00000040633|Q9BUL5-3|PHF23;nc|ENSG00000040633|Q9BUL5-4|PHF23;ENSG00000040633|ENST00000320316|PHF23	nc|ENSG00000040633|Q9BUL5-3|PHF23	nc|ENSG00000040633|Q9BUL5-3|PHF23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2514953613281	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.7932	1	7720	7720		25.45	1.2474	1	2823900			39094	928	26026	26038	44508	44508					0.04839453677391248
NRKPRQKTSA	10	Unmodified	_NRKPRQKTSA_					0	0	0			REV__nc|ENSG00000148773|P46013-2|MKI67	REV__nc|ENSG00000148773|P46013-2|MKI67	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	593.3438720703125	2	593.344178	1184.6738	-0.61427	-0.00036447	1.0434	0.0006191	0.42913	0.00025462	593.3447041008176	103.62	2.4136	103.61	103.22	105.64	-0.0035706					155	57	4	0	0	0	0.85834	1	11117	11117		22.58	0	1	2207400	+		39095	15466	26027	26039	44509	44509					0.08885231126032522
NRKPSPAAS	9	Unmodified	_NRKPSPAAS_					0	0	0		ENSG00000100139|ENST00000215957|MICALL1	ENSG00000100139|ENST00000215957|MICALL1	ENSG00000100139|ENST00000215957|MICALL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25390625	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.67345	1	8315	8315		42.396	5.237	1	1482000			39096	1801	26028	26040	44510	44510					0.027191324691784757
NRKRLWNFTEE	11	Unmodified	_NRKRLWNFTEE_					0	0	0		nc|ENSG00000157181|Q5SWX8-3|ODR4;nc|ENSG00000157181|Q5SWX8-4|ODR4;nc|ENSG00000157181|Q5SWX8-2|ODR4;ENSG00000157181|ENST00000287859|ODR4	nc|ENSG00000157181|Q5SWX8-3|ODR4	nc|ENSG00000157181|Q5SWX8-3|ODR4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.795654296875	3	498.26003	1491.75826	-0.06552	-3.2646E-05	2.0727	0.0010327	2.0072	0.0010001	498.59460608182724	20.703	0.13423	20.073	19.984	20.118	-0.6296					4	2	2	0	0	0	0.17835	1	688	688		27.644	5.0643	1	11133			39097	5414	26029	26041	44511	44511					0.032051371521447436
NRKRVNVRRAK	11	Unmodified	_NRKRVNVRRAK_					0	0	0			REV__nc|ENSG00000159086|Q9Y5B6-2|PAXBP1	REV__nc|ENSG00000159086|Q9Y5B6-2|PAXBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.29583740234375	3	466.29552	1395.86473	-0.33343	-0.00015548	0.30189	0.00014077	-0.031542	-1.4708E-05	466.295599377718	16.725	0.32122	16.646	16.513	16.834	-0.079056					21	12	3	0	0	0	0.7896	1	148	148		13.508	3.8618	1	51127	+		39098	20636	26030	26042	44512	44512					0.1826335722796557
NRKSSVGVK	9	Unmodified	_NRKSSVGVK_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7907409667969	2	487.790715	973.566878	-0.71211	-0.00034736	0.24728	0.00012062	-0.46484	-0.00022674	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.73802	1	8016	8016		37.812	7.4938	1	678280			39099	2506	26031	26043	44513	44513					0.07903680911670108
NRKTNGSVPE	10	Unmodified	_NRKTNGSVPE_					0	0	0		ENSG00000261794|ENST00000566740|GOLGA8H	ENSG00000261794|ENST00000566740|GOLGA8H	ENSG00000261794|ENST00000566740|GOLGA8H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.2835693359375	2	551.285994	1100.55744	-0.64318	-0.00035458	-2.6635	-0.0014684	-3.3067	-0.0018229	551.2844574783772	60.788	1.1006	60.775	60.038	61.139	-0.012203					50	33	2	0	0	0	0.54701	1	5611	5611		52.937	1.6012	1	132100			39100	8929	26032	26044	44514	44514					0.011178678354781368
NRLAAIKN	8	Unmodified	_NRLAAIKN_					0	0	0		nc|ENSG00000126787|Q15398-1|DLGAP5;nc|ENSG00000126787|Q15398-3|DLGAP5;chr14:55148684-55150799|63|83.44|0.53|7.29|-|ENST00000395425|DLGAP5,DLGAP5;chr14:55148473-55148594|63|98.57|0.62|7.32|-|ENST00000395425|DLGAP5,DLGAP5;ENSG00000126787|ENST00000247191|DLGAP5	nc|ENSG00000126787|Q15398-1|DLGAP5	nc|ENSG00000126787|Q15398-1|DLGAP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2738952636719	2	450.274701	898.534849	-1.7762	-0.00079979	1.8456	0.00083102	0.069358	3.123E-05	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.86288	1	12234	12234		26.796	1.3459	1	2494900			39101	171	26033	26045	44515	44515					0.08152313228504227
NRLAAIKN	8	Unmodified	_NRLAAIKN_					0	0	0		nc|ENSG00000126787|Q15398-1|DLGAP5;nc|ENSG00000126787|Q15398-3|DLGAP5;chr14:55148684-55150799|63|83.44|0.53|7.29|-|ENST00000395425|DLGAP5,DLGAP5;chr14:55148473-55148594|63|98.57|0.62|7.32|-|ENST00000395425|DLGAP5,DLGAP5;ENSG00000126787|ENST00000247191|DLGAP5	nc|ENSG00000126787|Q15398-1|DLGAP5	nc|ENSG00000126787|Q15398-1|DLGAP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.77862548828125	2	450.274701	898.534849	1.3487	0.00060726	-1.1312	-0.00050934	0.21747	9.7923E-05	450.27406199232615	114.07	1.0918	114.09	113.32	114.42	0.020027					62	49	2	0	0	0	0.80706	1	13789	13789		19.36	1.0356	1	78909			39102	171	26033	26045	44516	44516					0.08152313228504227
NRLAAIKN	8	Unmodified	_NRLAAIKN_					0	0	0		nc|ENSG00000126787|Q15398-1|DLGAP5;nc|ENSG00000126787|Q15398-3|DLGAP5;chr14:55148684-55150799|63|83.44|0.53|7.29|-|ENST00000395425|DLGAP5,DLGAP5;chr14:55148473-55148594|63|98.57|0.62|7.32|-|ENST00000395425|DLGAP5,DLGAP5;ENSG00000126787|ENST00000247191|DLGAP5	nc|ENSG00000126787|Q15398-1|DLGAP5	nc|ENSG00000126787|Q15398-1|DLGAP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2747497558594	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.884	1	11181	11181		33.516	1.5607	1	19085000			39103	171	26033	26045	44517	44517					0.08152313228504227
NRLALICPL	9	Unmodified	_NRLALICPL_					0	0	0		ENST00000594950.5_1_19:58865471-58865783:+|nuORF	ENST00000594950.5_1_19:58865471-58865783:+|nuORF	ENST00000594950.5_1_19:58865471-58865783:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8016052246094	2	506.802237	1011.58992	0.30541	0.00015478	-2.6091	-0.0013223	-2.3037	-0.0011675	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.77546	1	3355	3355		31.955	1.4512	1	412810			39104	14322	26034	26046	44518	44518					0.08458983704770162
NRLAQLKD	8	Unmodified	_NRLAQLKD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2778015136719	2	479.277441	956.540328	0.22517	0.00010792	0.23742	0.00011379	0.4626	0.00022171	479.2774672255816	97.14	0.77187	97.53	97.073	97.845	0.39065					47	18	3	0	0	0	0.884	1	11708	11708		33.516	1.5607	1	996060	+		39105	16363	26035	26047	44519	44519					0.060319920203255606
NRLDLIRPG	9	Unmodified	_NRLDLIRPG_					0	0	0		ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.310302734375	2	527.311815	1052.60908	0.20582	0.00010853	-1.5695	-0.00082761	-1.3637	-0.00071908	527.3108601932355	82.119	0.63732	82.546	82.236	82.873	0.42645					40	15	3	0	0	0	0.28163	1	9489	9489		66.429	5.4573	1	1775300			39106	3730	26036	26048	44520	44520					0.08487656320039605
NRLDLIRPG	9	Unmodified	_NRLDLIRPG_					0	0	0		ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3108520507812	2	527.311815	1052.60908	0.27726	0.0001462	-1.6071	-0.00084743	-1.3298	-0.00070123	527.3108365684026	82.015	0.67683	82.515	82.227	82.903	0.49966					39	14	3	0	0	0	0.58668	1	9516	9516		47.657	8.4045	1	1876100			39107	3730	26036	26048	44521	44521					0.08487656320039605
NRLEILKRKWW	11	Unmodified	_NRLEILKRKWW_					0	0	0		ENSG00000149403|ENST00000527524|GRIK4;ENST00000454993.6_1_19:42503025-42546997:-|nuORF;ENSG00000105737|ENST00000593562|GRIK5;nc|ENSG00000105737|Q16478-2|GRIK5	ENSG00000149403|ENST00000527524|GRIK4	ENSG00000149403|ENST00000527524|GRIK4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.2210083007812	3	514.640294	1540.89905	0.50509	0.00025994	-1.4172	-0.00072933	-0.91207	-0.00046939	514.9738235816402	29.772	0.12038	29.783	29.685	29.805	0.011229					6	5	2	0	0	0	0.18216	1	1272	1272		9.6461	0	1	28295			39108	5022	26037	26049	44522	44522					0.15023760596227476
NRLEILKRKWW	11	Unmodified	_NRLEILKRKWW_					0	0	0		ENSG00000149403|ENST00000527524|GRIK4;ENST00000454993.6_1_19:42503025-42546997:-|nuORF;ENSG00000105737|ENST00000593562|GRIK5;nc|ENSG00000105737|Q16478-2|GRIK5	ENSG00000149403|ENST00000527524|GRIK4	ENSG00000149403|ENST00000527524|GRIK4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	514.640294	1540.89905	0.17287	8.8964E-05	-2.4054	-0.0012379	-2.2325	-0.0011489	514.9717623591815	29.327	0.082903	29.44	29.411	29.494	0.11225	-0.17172	-4.3171E-05	NaN	9.6461	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23327			39109	5022	26037	26049							0.15023760596227476
NRLGVHGS	8	Unmodified	_NRLGVHGS_					0	0	0			REV__ENST00000487163.5_1_1:161131815-161133927:+|nuORF	REV__ENST00000487163.5_1_1:161131815-161133927:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.22900390625	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.87922	1	7635	7635		31.955	1.4512	1	634680	+		39110	19785	26038	26050	44523	44523					0.015265941262327942
NRLIWDFW	8	Unmodified	_NRLIWDFW_					0	0	0			REV__nc|ENSG00000166548|O00142-5|TK2	REV__nc|ENSG00000166548|O00142-5|TK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.2957763671875	2	575.295633	1148.57671	-0.88705	-0.00051031	3.6698	0.0021112	2.7828	0.0016009	575.2975755059318	42.721	0.6556	42.684	42.359	43.014	-0.036293					34	15	3	0	0	0	0.86288	1	3295	3295		26.796	0.10319	1	183420	+		39111	21304	26039	26051	44524	44524					0.008368689170083599
NRLKGREP	8	Unmodified	_NRLKGREP_					0	0	0		ENSG00000175084|ENST00000373960|DES	ENSG00000175084|ENST00000373960|DES	ENSG00000175084|ENST00000373960|DES	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.28741455078125	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.527	1	72.657	72.157	73.157	0.13064								0	0	0	0.29344	1	6655	6655		31.955	1.4512	1				39112	6989	26040	26052	44525	44525					0.06602814114467037
NRLLQILVP	9	Unmodified	_NRLLQILVP_					0	0	0			REV__ENSG00000151687|ENST00000684021|ANKAR	REV__ENSG00000151687|ENST00000684021|ANKAR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3399658203125	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.7932	1	10551	10551		19.36	1.0356	1	2530900	+		39113	20264	26041	26053	44526	44526					0.14086588019335977
NRLLRIRKS	9	Unmodified	_NRLLRIRKS_					0	0	0		nc|ENSG00000142609|Q9C0B2|CFAP74;ENSG00000142609|ENST00000682832|CFAP74;ENST00000270720.11_1_1:1887019-1905630:-|nuORF;nc|ENSG00000142609|Q9C0B2-2|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	578.3736572265625	2	578.375281	1154.73601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.08	1	51.087	50.587	51.587	0.0077438								0	0	0	0.35196	1	4385	4385		14.137	1.9303	1				39114	4573	26042	26054	44527	44527					0.1648300226502215
NRLPEVRK	8	Unmodified	_NRLPEVRK_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3092041015625	2	506.306532	1010.59851	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.188	1	55.28	54.78	55.78	0.091167								0	0	0	0.29568	1	4609	4609		35.201	1.6851	1		+		39115	23196	26043	26055	44528	44528					0.0936367366560944
NRLPGNLFQR	10	Unmodified	_NRLPGNLFQR_					0	0	0		nc|ENSG00000156709|O95831-4|AIFM1;ENSG00000156709|ENST00000287295|AIFM1	nc|ENSG00000156709|O95831-4|AIFM1	nc|ENSG00000156709|O95831-4|AIFM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.565185546875	3	405.563273	1213.66799	1.5319	0.00062128	2.1099	0.00085571	3.6418	0.001477	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.86718	1	5963	5963		20.03	3.5006	1	245170			39116	5390	26044	26056	44529	44529					0.06970132614355862
NRLQALTK	8	Unmodified	_NRLQALTK_					0	0	0		ENST00000278505.4_1_11:94864667-94864871:+|nuORF	ENST00000278505.4_1_11:94864667-94864871:+|nuORF	ENST00000278505.4_1_11:94864667-94864871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2880859375	2	472.287808	942.561064	-0.108	-5.1006E-05	-0.19809	-9.3555E-05	-0.30609	-0.00014456	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.90983	1	10416	10416		42.396	8.8806	1	46909000			39117	9609	26045	26057	44530	44530					0.08748582399971383
NRLRAVGG	8	Unmodified	_NRLRAVGG_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|5|1|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|5|1|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7515869140625	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.81548	2	7462	7462;7537		37.028	0	1	532850			39118	14692	26046	26058	44531;44532	44531					0.061148733972345326
NRLRPLERP	9	Unmodified	_NRLRPLERP_					0	0	0		ENSG00000129292|ENST00000395386|PHF20L1;nc|ENSG00000129292|A8MW92-2|PHF20L1;ENST00000361997.9_1_8:133790074-133829825:+|nuORF;ENST00000395383.5_1_8:133790074-133836319:+|nuORF;nc|ENSG00000129292|A8MW92-4|PHF20L1	ENSG00000129292|ENST00000395386|PHF20L1	ENSG00000129292|ENST00000395386|PHF20L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8426513671875	2	575.843813	1149.67307	0.80402	0.00046299	-2.4364	-0.001403	-1.6324	-0.00094001	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.78536	1	9458	9458		29.15	1.0681	1	6947200			39119	3581	26047	26059	44533	44533					0.10422436476960684
NRLRRPKIT	9	Unmodified	_NRLRRPKIT_					0	0	0			REV__ENST00000476243.5_1_17:16246230-16247960:-|nuORF	REV__ENST00000476243.5_1_17:16246230-16247960:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.365966796875	2	577.367456	1152.72036	-0.9604	-0.0005545	-0.66585	-0.00038444	-1.6262	-0.00093894	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.78058	1	10968	10968		30.504	0.18592	1	9850700	+		39120	27327	26048	26060	44534	44534					0.15010715747962422
NRLRVALEFIL	11	Unmodified	_NRLRVALEFIL_					0	0	0			REV__ENST00000409449.5_1_2:201750469-201754005:-|nuORF	REV__ENST00000409449.5_1_2:201750469-201754005:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6086730957031	3	448.610111	1342.8085	-1.3621	-0.00061104	-0.21826	-9.7912E-05	-1.5803	-0.00070895	448.6097970890054	75.668	1.3969	75.668	74.988	76.385	0					143	49	4	0	0	0	0.76892	1	6862	6862		17.833	1.8264	1	388770	+		39121	26346	26049	26061	44535	44535					0.15081291547926412
NRLRVALEFIL	11	Unmodified	_NRLRVALEFIL_					0	0	0			REV__ENST00000409449.5_1_2:201750469-201754005:-|nuORF	REV__ENST00000409449.5_1_2:201750469-201754005:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.94488525390625	3	448.610111	1342.8085	0.6314	0.00028325	-2.6255	-0.0011778	-1.9941	-0.00089457	448.60887470875934	77.01	0.99304	77.058	76.682	77.675	0.047981					82	45	2	0	0	0	0.75906	1	7549	7549		20.03	2.1973	1	702210	+		39122	26346	26049	26061	44536	44536					0.15081291547926412
NRLSHPSS	8	Unmodified	_NRLSHPSS_					0	0	0		ENSG00000136383|ENST00000258888|ALPK3	ENSG00000136383|ENST00000258888|ALPK3	ENSG00000136383|ENST00000258888|ALPK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.2333068847656	2	449.230491	896.446428	0.9656	0.00043378	-0.74303	-0.00033379	0.22258	9.9988E-05	449.2301030462438	83.133	5.5992	83.192	80.121	85.72	0.059158					204	132	2	0	0	0	0.9159	1	8415	8415		44.531	3.9584	1	221730			39123	4109	26050	26062	44537	44537					-0.0059372708195724044
NRLSRLARVG	10	Unmodified	_NRLSRLARVG_					0	0	0		ENST00000469172.5_1_10:70091618-70091822:+|nuORF	ENST00000469172.5_1_10:70091618-70091822:+|nuORF	ENST00000469172.5_1_10:70091618-70091822:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.3257446289062	2	571.349263	1140.68397	0.87231	0.0004984	-0.28103	-0.00016057	0.59128	0.00033783	571.851857977781	115.71	0.10075	115.77	115.72	115.82	0.05954					5	4	2	0	0	0	0.86047	1	12318	12318		23.523	4.1627	1	10309			39124	12192	26051	26063	44538	44538					0.11925838851243498
NRLSRLARVG	10	Unmodified	_NRLSRLARVG_					0	0	0		ENST00000469172.5_1_10:70091618-70091822:+|nuORF	ENST00000469172.5_1_10:70091618-70091822:+|nuORF	ENST00000469172.5_1_10:70091618-70091822:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	571.349263	1140.68397	-1.1047	-0.00063115	-6.6103	-0.0037768	-7.715	-0.004408	571.8466698014078	115.78	0.079704	115.71	115.67	115.75	-0.072342	-0.029044	-0.0028497	NaN	23.523	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18500			39125	12192	26051	26063							0.11925838851243498
NRLSRLLHK	9	Unmodified	_NRLSRLLHK_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8538818359375	2	568.854181	1135.69381	-1.1637	-0.000662	-0.61846	-0.00035181	-1.7822	-0.0010138	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.76255	1	11104	11104		35.618	3.6634	1	50786000			39126	7613	26052	26064	44539	44539					0.13139026856629243
NRLSRLLHK	9	Unmodified	_NRLSRLLHK_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8538208007812	2	568.854181	1135.69381	0.52259	0.00029728	-2.4856	-0.0014139	-1.963	-0.0011166	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.7932	1	11038	11038		21.96	1.013	1	84800000			39127	7613	26052	26064	44540	44540					0.13139026856629243
NRLSRLLHK	9	Unmodified	_NRLSRLLHK_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.85400390625	2	568.854181	1135.69381	0.87008	0.00049495	-2.8282	-0.0016088	-1.9581	-0.0011139	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.74721	2	10888	10888;10936		37.159	7.1258	1	78933000			39128	7613	26052	26064	44541;44542	44541					0.13139026856629243
NRLTTITGR	9	Unmodified	_NRLTTITGR_					0	0	0			REV__ENST00000529023.5_1_11:86749009-86868454:+|nuORF	REV__ENST00000529023.5_1_11:86749009-86868454:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7979125976562	2	516.301447	1030.58834	-0.029363	-1.516E-05	-1.5847	-0.0008182	-1.6141	-0.00083336	516.3013663532613	57.234	1.5278	57.221	56.762	58.289	-0.012203					115	51	4	0	0	0	0.74721	1	5122	5122		37.159	0	1	678400	+		39129	21305	26053	26065	44543	44543					0.07427065940373723
NRLYILITT	9	Unmodified	_NRLYILITT_					0	0	0			REV__ENST00000368891.9_1_10:124697547-124708177:-|nuORF	REV__ENST00000368891.9_1_10:124697547-124708177:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8302612304688	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.72402	1	8850	8850		38.806	3.6541	1	1728300	+		39130	25609	26054	26066	44544	44544					0.10094577919812764
NRLYILITT	9	Unmodified	_NRLYILITT_					0	0	0			REV__ENST00000368891.9_1_10:124697547-124708177:-|nuORF	REV__ENST00000368891.9_1_10:124697547-124708177:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8307495117188	2	553.832049	1105.64954	-1.2274	-0.00067979	-2.3284	-0.0012895	-3.5558	-0.0019693	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.77546	1	10542	10542		31.955	1.4512	1	1825600	+		39131	25609	26054	26066	44545	44545					0.10094577919812764
NRMAKGVKEID	11	Oxidation (M)	_NRM(Oxidation (M))AKGVKEID_		NRM(1)AKGVKEID		NRM(99)AKGVKEID	0	0	1		ENST00000462351.5_1_2:220154950-220159983:-|nuORF;nc|ENSG00000054356|Q16849-3|PTPRN;nc|ENSG00000054356|Q16849-2|PTPRN;ENSG00000054356|ENST00000295718|PTPRN	ENST00000462351.5_1_2:220154950-220159983:-|nuORF	ENST00000462351.5_1_2:220154950-220159983:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	638.8355712890625	2	638.837536	1275.66052	1.5107	0.00096509	-4.3931	-0.0028064	-2.8824	-0.0018414	638.8343540273713	74.714	0.84661	74.841	74.555	75.402	0.1271					66	22	4	0	0	0	0.06978	1	6916	6916		98.582	18.127	1	652180			39132	1019	26055	26067	44546	44546		17			0.03371612231785548
NRMENAVN	8	Unmodified	_NRMENAVN_					0	0	0			REV__ENST00000608574.1_2_1:109632787-109633024:-|nuORF	REV__ENST00000608574.1_2_1:109632787-109633024:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	474.2234802246094	2	474.221808	946.429063	-1.0302	-0.00048856	3.4468	0.0016346	2.4166	0.001146	474.2236350594803	69.117	0.65221	69.182	68.918	69.571	0.065514					56	29	3	0	0	0	0.87064	1	6238	6238		29.15	3.5755	1	381450	+		39133	29399	26056	26068	44547	44547					-0.04629390679269818
NRNPNLKHK	9	Unmodified	_NRNPNLKHK_					0	0	0			REV__nc|ENSG00000132970|Q9UPY6-2|WASF3	REV__nc|ENSG00000132970|Q9UPY6-2|WASF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8195190429688	2	560.820338	1119.62612	-1.4169	-0.00079462	0.52008	0.00029167	-0.89681	-0.00050295	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.7932	1	9282	9282		24.203	2.2429	1	758020	+		39134	29850	26057	26069	44548	44548					0.07109576925836336
NRPALRLDRP	10	Unmodified	_NRPALRLDRP_					0	0	0		nc|ENSG00000099834|Q9HBB8-2|CDHR5;nc|ENSG00000099834|Q9HBB8-4|CDHR5;ENSG00000099834|ENST00000397542|CDHR5	nc|ENSG00000099834|Q9HBB8-2|CDHR5	nc|ENSG00000099834|Q9HBB8-2|CDHR5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3538818359375	2	604.354545	1206.69454	0.92642	0.00055989	-0.059209	-3.5783E-05	0.86721	0.0005241	604.3533318252587	82.461	2.1029	82.395	80.908	83.011	-0.066185					89	48	3	0	0	0	0.8651	1	8358	8358		25.574	4.6271	1	167590			39135	1770	26058	26070	44549	44549					0.09945821505675667
NRPALRLDRP	10	Unmodified	_NRPALRLDRP_					0	0	0		nc|ENSG00000099834|Q9HBB8-2|CDHR5;nc|ENSG00000099834|Q9HBB8-4|CDHR5;ENSG00000099834|ENST00000397542|CDHR5	nc|ENSG00000099834|Q9HBB8-2|CDHR5	nc|ENSG00000099834|Q9HBB8-2|CDHR5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	604.354545	1206.69454	-0.48727	-0.00029449	1.6017	0.00096798	1.1144	0.00067349	604.354175459901	82.367	2.0684	82.433	81.056	83.125	0.065918	0.050455	0.00080525	NaN	25.574	92	47	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	190970			39136	1770	26058	26070							0.09945821505675667
NRPALRLDRP	10	Unmodified	_NRPALRLDRP_					0	0	0		nc|ENSG00000099834|Q9HBB8-2|CDHR5;nc|ENSG00000099834|Q9HBB8-4|CDHR5;ENSG00000099834|ENST00000397542|CDHR5	nc|ENSG00000099834|Q9HBB8-2|CDHR5	nc|ENSG00000099834|Q9HBB8-2|CDHR5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	604.354545	1206.69454	-0.59733	-0.000361	1.225	0.00074032	0.62765	0.00037932	604.3541884199088	82.26	2.2047	82.32	80.779	82.984	0.059158	-0.063042	0.00034993	NaN	25.574	88	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150620			39137	1770	26058	26070							0.09945821505675667
NRPGGDSH	8	Unmodified	_NRPGGDSH_					0	0	0			REV__nc|ENSG00000043143|Q9NQC1-3|JADE2	REV__nc|ENSG00000043143|Q9NQC1-3|JADE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1918029785156	2	420.191365	838.368178	-0.017504	-7.3551E-06	0.10202	4.2869E-05	0.084518	3.5514E-05	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.87922	2	11342	11094;11342		35.618	3.6634	1	4147200	+		39138	16335	26059	26071	44550;44551	44551					-0.057471596671916814
NRPKVQLKH	9	Unmodified	_NRPKVQLKH_					0	0	0			REV__ENSG00000196872|ENST00000397899|CRACDL	REV__ENSG00000196872|ENST00000397899|CRACDL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3404541015625	2	560.340907	1118.66726	0.75729	0.00042434	-2	-0.0011207	-1.2427	-0.00069633	560.3396777082794	89.478	2.7427	89.63	87.684	90.427	0.1519					160	64	4	0	0	0	0.78058	1	8975	8975		30.504	1.3541	1	678500	+		39139	23177	26060	26072	44552	44552					0.11267337965318802
NRPPLLMRT	9	Unmodified	_NRPPLLMRT_					0	0	0			REV__nc|ENSG00000187398|Q86TE4-4|LUZP2	REV__nc|ENSG00000187398|Q86TE4-4|LUZP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.319580078125	2	549.316043	1096.61753	0.85079	0.00046735	2.0297	0.0011149	2.8804	0.0015823	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.7932	1	10639	10639		23.042	0	1	2023500	+		39140	15491	26061	26073	44553	44553					0.07308886965006423
NRPQPGASA	9	Unmodified	_NRPQPGASA_					0	0	0			REV__ENSG00000164440|ENST00000358430|TXLNB	REV__ENSG00000164440|ENST00000358430|TXLNB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	449.2348937988281	2	449.230491	896.446428	-1.2481	-0.0005607	1.5085	0.00067767	0.26038	0.00011697	449.23112787491493	83.63	3.2349	83.63	82.037	85.271	0					120	78	2	0	0	0	0.64922	1	7828	7828		44.117	9.9443	1	126580	+		39141	21082	26062	26074	44554	44554					-0.0059372708195724044
NRPQPGASA	9	Unmodified	_NRPQPGASA_					0	0	0			REV__ENSG00000164440|ENST00000358430|TXLNB	REV__ENSG00000164440|ENST00000358430|TXLNB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2323303222656	2	449.230491	896.446428	0.61452	0.00027606	-0.40863	-0.00018357	0.20588	9.249E-05	449.2302672922752	83.471	4.8977	83.402	80.905	85.803	-0.069313					227	113	3	0	0	0	0.76255	1	8463	8463		35.618	5.3006	1	260170	+		39142	21082	26062	26074	44555	44555					-0.0059372708195724044
NRPWPLKFSS	10	Unmodified	_NRPWPLKFSS_					0	0	0			REV__ENST00000609285.5_1_20:1306235-1306301:+|nuORF	REV__ENST00000609285.5_1_20:1306235-1306301:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.1796875	3	411.224257	1230.65094	2.9135	0.0011981	2.2899	0.00094165	5.2033	0.0021397	411.2246946435951	18.953	0.673	18.878	18.769	19.442	-0.074974					45	24	3	0	0	0	0.37624	1	387	387		23.378	10.945	1	74917	+		39143	29411	26063	26075	44556	44556					0.04484212008560462
NRPYVCNI	8	Unmodified	_NRPYVCNI_					0	0	0		ENSG00000198146|ENST00000356321|ZNF770	ENSG00000198146|ENST00000356321|ZNF770	ENSG00000198146|ENST00000356321|ZNF770	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.7423400878906	2	489.744919	977.475285	-0.19835	-9.7143E-05	-3.9707	-0.0019446	-4.169	-0.0020418	489.7428935831139	78.737	0.84704	79.3	78.952	79.799	0.56332					46	19	3	0	0	0	0.90465	1	9041	9041		40.573	3.4135	1	912380			39144	8245	26064	26076	44557	44557					-0.014353257771858807
NRQEFVDA	8	Unmodified	_NRQEFVDA_					0	0	0		nc|ENSG00000148634|Q5GLZ8-6|HERC4;nc|ENSG00000148634|Q5GLZ8-3|HERC4;ENSG00000148634|ENST00000373700|HERC4;nc|ENSG00000148634|Q5GLZ8|HERC4;ENST00000427635.6_1_10:69682690-69747802:-|nuORF;ENSG00000138641|ENST00000402738|HERC3	nc|ENSG00000148634|Q5GLZ8-6|HERC4;ENSG00000138641|ENST00000402738|HERC3	nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.20062255859375	2	489.735606	977.456658	0.14817	7.2566E-05	-1.9737	-0.00096659	-1.8255	-0.00089403	489.7345190805327	54.176	0.50367	54.582	54.403	54.907	0.40663					16	11	2	0	0	0	0.4196	1	5502	5502		24.203	8.5609	1	143310			39145	4973;4310	26065	26077	44558	44558					-0.03297164147386411
NRQFTLAKKQW	11	Unmodified	_NRQFTLAKKQW_					0	0	0		ENSG00000152684|ENST00000274311|PELO	ENSG00000152684|ENST00000274311|PELO	ENSG00000152684|ENST00000274311|PELO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2980041503906	3	473.933366	1418.77827	-0.49437	-0.0002343	-2.4462	-0.0011593	-2.9405	-0.0013936	474.266196724623	16.177	0.13573	15.578	15.465	15.601	-0.59873					4	2	2	0	0	0	0.18066	1	88	88		14.086	4.8742	1	42667			39146	5193	26066	26078	44559	44559					0.08562932882728091
NRQFTLAKKQW	11	Unmodified	_NRQFTLAKKQW_					0	0	0		ENSG00000152684|ENST00000274311|PELO	ENSG00000152684|ENST00000274311|PELO	ENSG00000152684|ENST00000274311|PELO	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	473.933366	1418.77827	0.99243	0.00047034	-4.0475	-0.0019182	-3.0551	-0.0014479	473.9316515933721	15.218	0.28022	15.296	15.137	15.418	0.077959	-0.14071	-0.0011828	NaN	14.086	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15390			39147	5193	26066	26078							0.08562932882728091
NRQKLDSKK	9	Unmodified	_NRQKLDSKK_					0	0	0		ENSG00000108840|ENST00000682912|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5;ENST00000460235.1_1_2:240024358-240029778:-|nuORF;ENST00000487617.5_1_2:240002789-240024568:-|nuORF;ENST00000535493.5_1_2:240016681-240219867:-|nuORF;ENST00000493582.5_1_2:240016681-240274403:-|nuORF;ENST00000463007.5_1_2:240011659-240219867:-|nuORF;nc|ENSG00000068024|P56524-2|HDAC4;nc|ENSG00000068024|P56524|HDAC4;ENSG00000068024|ENST00000543185|HDAC4	ENSG00000108840|ENST00000682912|HDAC5;ENST00000535493.5_1_2:240016681-240219867:-|nuORF	ENSG00000108840|ENST00000682912|HDAC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.82666015625	2	558.827829	1115.64111	-1.0492	-0.00058632	0.57454	0.00032107	-0.47466	-0.00026526	558.8279409375286	65.72	0.77834	65.731	65.181	65.96	0.010445					89	39	3	0	0	0	0.7932	1	6186	6186		26.693	2.1737	1	2079700			39148	2435;1193	26067	26079	44560	44560					0.087910240031988
NRQVNSALH	9	Unmodified	_NRQVNSALH_					0	0	0			REV__nc|ENSG00000152492|Q8IVM0|CCDC50	REV__nc|ENSG00000152492|Q8IVM0|CCDC50	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.818603515625	2	519.775597	1037.53664	0.015234	7.9184E-06	2.9592	0.0015381	2.9745	0.0015461	519.776984291172	83.95	1.101	84.385	84.003	85.103	0.43537					53	26	3	0	0	0	0.20322	1	9802	9802		76.847	19.035	1	275600	+		39149	20302	26068	26080	44561	44561					0.019373222464764694
NRQYRMHSLQH	11	Unmodified	_NRQYRMHSLQH_					0	0	0		ENST00000527129.1_1_11:76831698-76834913:+|nuORF;ENSG00000149260|ENST00000648180|CAPN5	ENST00000527129.1_1_11:76831698-76834913:+|nuORF	ENST00000527129.1_1_11:76831698-76834913:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.5791931152344	3	490.577476	1468.7106	0.23176	0.0001137	3.75	0.0018397	3.9817	0.0019534	490.57933719725315	18.437	1.0345	17.96	17.703	18.738	-0.47694					60	22	5	0	0	0	0.76579	1	415	415		18.531	1.3643	1	1434900			39150	5010	26069	26081	44562	44562					-0.005008403197052758
NRRFFHDFRKM	11	Unmodified	_NRRFFHDFRKM_					0	0	0		ENSG00000196131|ENST00000341702|VN1R2	ENSG00000196131|ENST00000341702|VN1R2	ENSG00000196131|ENST00000341702|VN1R2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.7847290039062	3	518.601733	1552.78337	-0.32475	-0.00016841	3.9306	0.0020384	3.6058	0.00187	518.6034794236397	28.702	0.54351	28.672	28.366	28.91	-0.029207					15	12	2	0	0	0	0.18164	1	1731	1731		10.587	0	1	84856			39151	8015	26070	26082	44563	44563					0.029089134736750566
NRRFFHDFRKM	11	Unmodified	_NRRFFHDFRKM_					0	0	0		ENSG00000196131|ENST00000341702|VN1R2	ENSG00000196131|ENST00000341702|VN1R2	ENSG00000196131|ENST00000341702|VN1R2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	518.601733	1552.78337	0.73499	0.00038117	3.2097	0.0016646	3.9447	0.0020457	518.6034667254306	28.89	0.46751	28.717	28.51	28.977	-0.17336	0.022225	-0.00041938	NaN	10.587	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82465			39152	8015	26070	26082							0.029089134736750566
NRRIAEPIKP	10	Unmodified	_NRRIAEPIKP_					0	0	0			REV__ENSG00000107566|ENST00000421367|ERLIN1	REV__ENSG00000107566|ENST00000421367|ERLIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.3592529296875	2	597.359296	1192.70404	-0.56757	-0.00033904	-1.0155	-0.00060663	-1.5831	-0.00094568	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.8608	1	10757	10757		34.173	6.2903	1	3951300	+		39153	17663	26071	26083	44564	44564					0.11539589791209437
NRRKECVWRYV	11	Unmodified	_NRRKECVWRYV_					0	0	0			REV__nc|ENSG00000161944|P07307-3|ASGR2	REV__nc|ENSG00000161944|P07307-3|ASGR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	504.3478698730469	3	503.601622	1507.78304	0.18611	9.3724E-05	2.2105	0.0011132	2.3966	0.0012069	503.9371121647455	37.726	0.12927	37.668	37.566	37.695	-0.057915					5	4	2	0	0	0	0.18131	1	2170	2170		17.833	5.4003	1	76603	+		39154	20786	26072	26084	44565	44565					0.049454937538484955
NRRKFYLILKK	11	Unmodified	_NRRKFYLILKK_					0	0	0			REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.984619140625	3	493.648789	1477.92454	-0.69439	-0.00034278	2.5038	0.001236	1.8095	0.00089323	493.64986615428916	44.451	1.6231	44.46	43.725	45.348	0.0084534					108	38	3	0	0	0	0.84494	1	3099	3099		6.3209	2.9122	1	353910	+		39155	23137	26073	26085	44566	44566					0.2046923511861678
NRRKFYLILKK	11	Unmodified	_NRRKFYLILKK_					0	0	0			REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.6497802734375	3	493.648789	1477.92454	-1.9346	-0.00095502	3.3003	0.0016292	1.3657	0.00067415	493.6503109233065	42.118	1.0078	42.815	42.456	43.463	0.69754					85	24	4	0	0	0	0.81219	1	3797	3797		8.7993	2.7983	1	1535500	+		39156	23137	26073	26085	44567	44567					0.2046923511861678
NRRKKRAAGR	10	Unmodified	_NRRKKRAAGR_					0	0	0		nc|ENSG00000165801|Q8TER5-4|ARHGEF40;nc|ENSG00000165801|Q8TER5-3|ARHGEF40;ENSG00000165801|ENST00000298694|ARHGEF40;ENST00000555052.1_1_14:21542936-21543858:+|nuORF	nc|ENSG00000165801|Q8TER5-4|ARHGEF40	nc|ENSG00000165801|Q8TER5-4|ARHGEF40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.9227600097656	3	404.921794	1211.74355	0.44862	0.00018165	2.2736	0.00092064	2.7222	0.0011023	404.92260093832465	26.168	1.321	26.213	25.795	27.116	0.045507					105	39	4	0	0	0	0.86802	1	1055	1055		27.047	6.2102	1	304530			39157	6124	26074	26086	44568	44568					0.14615154585294476
NRRLIRKTKLH	11	Unmodified	_NRRLIRKTKLH_					0	0	0			REV__nc|ENSG00000163714|O15042-3|U2SURP	REV__nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3077697753906	3	478.975788	1433.90553	0.065395	3.1322E-05	-2.7829	-0.001333	-2.7175	-0.0013016	478.9743761165068	49.154	1.8702	49.148	48.387	50.257	-0.0056381					110	43	3	0	0	0	0.79224	1	4187	4187		12.957	2.3707	1	187140	+		39158	29986	26075	26087	44569	44569					0.2059369854760007
NRRLIRKTKLH	11	Unmodified	_NRRLIRKTKLH_					0	0	0			REV__nc|ENSG00000163714|O15042-3|U2SURP	REV__nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3093566894531	3	478.975788	1433.90553	-0.69273	-0.0003318	-2.0219	-0.00096845	-2.7146	-0.0013002	478.9746813820608	49.583	2.3312	49.559	48.401	50.732	-0.024033					111	53	3	0	0	0	0.85873	1	4335	4335		5.4129	0	1	142150	+		39159	29986	26075	26087	44570	44570					0.2059369854760007
NRRLIRKTKLH	11	Unmodified	_NRRLIRKTKLH_					0	0	0			REV__nc|ENSG00000163714|O15042-3|U2SURP	REV__nc|ENSG00000163714|O15042-3|U2SURP	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9762878417969	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.059	1	60.027	59.527	60.527	-0.031727								0	0	0	0.56276	1	5651	5651		7.0192	0.35955	1		+		39160	29986	26075	26087	44571	44571					0.2059369854760007
NRRLIRKTKLH	11	Unmodified	_NRRLIRKTKLH_					0	0	0			REV__nc|ENSG00000163714|O15042-3|U2SURP	REV__nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9747619628906	3	478.975788	1433.90553	-0.91416	-0.00043786	-2.4354	-0.0011665	-3.3496	-0.0016044	478.9746832148069	43.078	1.9449	43.084	42.148	44.093	0.0057487					98	52	3	0	0	0	0.81892	1	2974	2974		8.0344	0	1	330000	+		39161	29986	26075	26087	44572	44572					0.2059369854760007
NRRLIRKTKLH	11	Unmodified	_NRRLIRKTKLH_					0	0	0			REV__nc|ENSG00000163714|O15042-3|U2SURP	REV__nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97723388671875	3	478.975788	1433.90553	0.30578	0.00014646	-2.6417	-0.0012653	-2.3359	-0.0011188	478.97445511920006	47.863	1.3107	47.901	47.243	48.554	0.037731					72	41	3	0	0	0	0.80593	1	3541	3541		10.104	3.783	1	244030	+		39162	29986	26075	26087	44573	44573					0.2059369854760007
NRRLIRKTKLH	11	Unmodified	_NRRLIRKTKLH_					0	0	0			REV__nc|ENSG00000163714|O15042-3|U2SURP	REV__nc|ENSG00000163714|O15042-3|U2SURP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.99700927734375	3	478.975788	1433.90553	-1.1558	-0.0005536	-0.92199	-0.00044161	-2.0778	-0.0009952	478.9750609067642	73.191	0.41579	73.275	72.977	73.393	0.083145					20	13	2	0	0	0	0.17784	1	6716	6716		22.562	4.7284	1	68113	+		39163	29986	26075	26087	44574	44574					0.2059369854760007
NRRLIRKTKLH	11	Unmodified	_NRRLIRKTKLH_					0	0	0			REV__nc|ENSG00000163714|O15042-3|U2SURP	REV__nc|ENSG00000163714|O15042-3|U2SURP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.9921875	3	478.975788	1433.90553	-0.87888	-0.00042096	-0.87528	-0.00041924	-1.7542	-0.0008402	478.9749231999014	71.8	0.24707	72.35	72.195	72.442	0.55008					8	5	2	0	0	0	0.17863	1	8043	8043		19.263	10.051	1	48775	+		39164	29986	26075	26087	44575	44575					0.2059369854760007
NRRLIRKTKLH	11	Unmodified	_NRRLIRKTKLH_					0	0	0			REV__nc|ENSG00000163714|O15042-3|U2SURP	REV__nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	478.975788	1433.90553	-1.1188	-0.00053587	-1.1797	-0.00056504	-2.2985	-0.0011009	478.9749411487218	72.072	0.20903	72.152	72.007	72.216	0.080032	-0.098633	-0.00022016	NaN	19.263	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54299	+		39165	29986	26075	26087							0.2059369854760007
NRRLKNVLSK	10	Unmodified	_NRRLKNVLSK_					0	0	0			REV__ENSG00000173156|ENST00000308831|RHOD	REV__ENSG00000173156|ENST00000308831|RHOD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	614.3844604492188	2	614.385845	1226.75714	-0.37057	-0.00022768	-2.2452	-0.0013794	-2.6158	-0.0016071	614.3840432103993	100.51	0.88322	100.54	100.13	101.01	0.032761					44	19	3	0	0	0	0.86348	1	10722	10722		31.53	8.9502	1	224400	+		39166	21894	26076	26088	44576	44576					0.15282967573875794
NRRLKRKETNI	11	Unmodified	_NRRLKRKETNI_					0	0	0			REV__ENST00000206595.10_1_14:31050289-31058589:+|nuORF	REV__ENST00000206595.10_1_14:31050289-31058589:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6224670410156	3	476.623303	1426.84808	2.8112	0.0013399	-1.9889	-0.00094794	0.82234	0.00039195	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.80361	1	13174	13174		10.587	0.4829	1	2689700	+		39167	24108	26077	26089	44577	44577					0.15172811551383347
NRRLKRKETNI	11	Unmodified	_NRRLKRKETNI_					0	0	0			REV__ENST00000206595.10_1_14:31050289-31058589:+|nuORF	REV__ENST00000206595.10_1_14:31050289-31058589:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62506103515625	3	476.623303	1426.84808	-1.6911	-0.000806	2.5351	0.0012083	0.84407	0.0004023	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.7896	2	12740	12491;12740		13.508	0.55046	1	2577100	+		39168	24108	26077	26089	44578;44579	44579					0.15172811551383347
NRRLQLHLG	9	Unmodified	_NRRLQLHLG_					0	0	0		ENSG00000055813|ENST00000407595|CCDC85A	ENSG00000055813|ENST00000407595|CCDC85A	ENSG00000055813|ENST00000407595|CCDC85A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8297119140625	2	553.830706	1105.64686	1.198	0.00066348	-2.4064	-0.0013328	-1.2084	-0.00066928	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.77546	1	9002	9002		31.955	1.4512	1	1689700			39169	1029	26078	26090	44580	44580					0.09826167305527633
NRRLTRVF	8	Unmodified	_NRRLTRVF_					0	0	0		ENST00000272542.7_1_2:113420608-113420746:+|nuORF	ENST00000272542.7_1_2:113420608-113420746:+|nuORF	ENST00000272542.7_1_2:113420608-113420746:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.31884765625	2	531.319974	1060.6254	1.2436	0.00066073	-2.5045	-0.0013307	-1.261	-0.00066997	531.3184005268905	94.973	2.3333	95.019	94.535	96.868	0.046173					183	54	5	0	0	0	0.84341	1	10044	10044		24.203	2.2429	1	4128600			39170	9568	26079	26091	44581	44581					0.09750782276796599
NRRMTSTF	8	Unmodified	_NRRMTSTF_					0	0	0		ENST00000490638.5_1_9:35662951-35663053:-|nuORF	ENST00000490638.5_1_9:35662951-35663053:-|nuORF	ENST00000490638.5_1_9:35662951-35663053:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.7530212402344	2	506.753276	1011.492	1.4444	0.00073194	-2.1253	-0.001077	-0.68094	-0.00034507	506.75204042720367	98.5	2.1767	98.861	97.949	100.13	0.36137					121	53	5	0	0	0	0.92457	1	11855	11855		47.916	3.7988	1	5114500			39171	12671	26080	26092	44582	44582					-0.013288248912203926
NRRRASKAS	9	Unmodified	_NRRRASKAS_					0	0	0		ENST00000467894.5_1_1:33790468-33797238:-|nuORF;nc|ENSG00000134686|Q8IXK0-3|PHC2;ENST00000485928.5_1_1:33791428-33799821:-|nuORF;nc|ENSG00000134686|Q8IXK0-2|PHC2;nc|ENSG00000134686|Q8IXK0-4|PHC2;nc|ENSG00000134686|Q8IXK0|PHC2;ENSG00000134686|ENST00000683057|PHC2	ENST00000467894.5_1_1:33790468-33797238:-|nuORF	ENST00000467894.5_1_1:33790468-33797238:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035278320312	2	523.302313	1044.59007	-0.79828	-0.00041774	3.2485	0.0017	2.4503	0.0012822	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.76255	1	8646	8646		35.618	0.46626	1	9288900			39172	3952	26081	26093	44583	44583					0.0695611974899748
NRRRASKAS	9	Unmodified	_NRRRASKAS_					0	0	0		ENST00000467894.5_1_1:33790468-33797238:-|nuORF;nc|ENSG00000134686|Q8IXK0-3|PHC2;ENST00000485928.5_1_1:33791428-33799821:-|nuORF;nc|ENSG00000134686|Q8IXK0-2|PHC2;nc|ENSG00000134686|Q8IXK0-4|PHC2;nc|ENSG00000134686|Q8IXK0|PHC2;ENSG00000134686|ENST00000683057|PHC2	ENST00000467894.5_1_1:33790468-33797238:-|nuORF	ENST00000467894.5_1_1:33790468-33797238:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3035888671875	2	523.302313	1044.59007	0.60955	0.00031898	1.8704	0.00097876	2.4799	0.0012977	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.55097	1	10142	10142		49.442	10.189	1	4023800			39173	3952	26081	26093	44584	44584					0.0695611974899748
NRRRASKAS	9	Unmodified	_NRRRASKAS_					0	0	0		ENST00000467894.5_1_1:33790468-33797238:-|nuORF;nc|ENSG00000134686|Q8IXK0-3|PHC2;ENST00000485928.5_1_1:33791428-33799821:-|nuORF;nc|ENSG00000134686|Q8IXK0-2|PHC2;nc|ENSG00000134686|Q8IXK0-4|PHC2;nc|ENSG00000134686|Q8IXK0|PHC2;ENSG00000134686|ENST00000683057|PHC2	ENST00000467894.5_1_1:33790468-33797238:-|nuORF	ENST00000467894.5_1_1:33790468-33797238:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3043212890625	2	523.302313	1044.59007	-1.0824	-0.0005664	3.5451	0.0018552	2.4628	0.0012888	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.69624	1	10783	10783		40.778	1.5253	1	13160000			39174	3952	26081	26093	44585	44585					0.0695611974899748
NRRRIQRRGP	10	Unmodified	_NRRRIQRRGP_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;ENST00000566039.5_1_15:66793707-66797161:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.9336853027344	3	436.932582	1307.77592	0.27454	0.00011996	2.8917	0.0012635	3.1662	0.0013834	436.9337888157145	20.681	2.5222	20.051	19.49	22.012	-0.62961					153	62	4	0	0	0	0.86621	1	708	708		26.063	5.7484	1	646260			39175	6934	26082	26094	44586	44586					0.13433941988296283
NRRRRQTWRRF	11	Unmodified	_NRRRRQTWRRF_					0	0	0			REV__ENST00000233468.4_1_2:24290678-24291201:-|nuORF	REV__ENST00000233468.4_1_2:24290678-24291201:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.3326416015625	3	544.645324	1630.91414	0.16097	8.7674E-05	0.094369	5.1398E-05	0.25534	0.00013907	544.6445385653004	99.334	3.1146	99.557	97.442	100.56	0.22263					117	72	3	0	0	0	0.18372	1	10177	10177		6.3209	4.9021	1	171550	+		39176	24203	26083	26095	44587	44587					0.12392065236736016
NRRRSSVA	8	Unmodified	_NRRRSSVA_					0	0	0			REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337	REV__nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.2747802734375	2	473.270481	944.52641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.954	1	80.014	79.514	80.514	0.059349								0	0	0	0.29631	1	7818	7818		25.45	2.4077	1		+		39177	18890	26084	26096	44588	44588					0.051927593118989535
NRRSALARVG	10	Unmodified	_NRRSALARVG_					0	0	0		ENSG00000196998|ENST00000376372|WDR45;nc|ENSG00000196998|Q9Y484-3|WDR45;nc|ENSG00000196998|Q9Y484-2|WDR45	ENSG00000196998|ENST00000376372|WDR45	ENSG00000196998|ENST00000376372|WDR45	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.3279418945312	2	550.325788	1098.63702	-0.59914	-0.00032972	3.2172	0.0017705	2.6181	0.0014408	550.3275633204873	100.31	1.098	100.35	99.837	100.93	0.041107					67	24	4	0	0	0	0.86587	2	10708	10661;10708		29.17	7.2102	1	446840			39178	8121	26085	26097	44589;44590	44590					0.09164979300112464
NRRSKFKIA	9	Unmodified	_NRRSKFKIA_					0	0	0		ENST00000422748.5_2_7:134653379-134653538:+|nuORF	ENST00000422748.5_2_7:134653379-134653538:+|nuORF	ENST00000422748.5_2_7:134653379-134653538:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3407592773438	2	560.340907	1118.66726	0.86176	0.00048288	-2.22	-0.001244	-1.3582	-0.00076107	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.7932	1	11126	11126		23.042	1.0826	1	126390000			39179	11485	26086	26098	44591	44591					0.11267337965318802
NRRSKGKKPRP	11	Unmodified	_NRRSKGKKPRP_					0	0	0			REV__ENST00000231229.8_2_5:180374644-180376241:+|nuORF	REV__ENST00000231229.8_2_5:180374644-180376241:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.9394836425781	3	441.940855	1322.80073	-1.6543	-0.0007311	-0.52949	-0.000234	-2.1838	-0.00096511	441.9404880038731	55.736	1.19	55.736	54.998	56.188	0					100	33	4	0	0	0	0.77205	1	4724	4724		17.167	3.6588	1	347630	+		39180	24196	26087	26099	44592	44592					0.15224577071035128
NRRSKGKKPRP	11	Unmodified	_NRRSKGKKPRP_					0	0	0			REV__ENST00000231229.8_2_5:180374644-180376241:+|nuORF	REV__ENST00000231229.8_2_5:180374644-180376241:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.9394836425781	3	441.940855	1322.80073	0.63201	0.00027931	-2.9701	-0.0013126	-2.3381	-0.0010333	441.93938161315157	55.264	1.2271	55.292	54.682	55.909	0.027142					77	31	3	0	0	0	0.75779	1	4933	4933		20.315	0	1	422510	+		39181	24196	26087	26099	44593	44593					0.15224577071035128
NRRSKGKKPRP	11	Unmodified	_NRRSKGKKPRP_					0	0	0			REV__ENST00000231229.8_2_5:180374644-180376241:+|nuORF	REV__ENST00000231229.8_2_5:180374644-180376241:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2742004394531	3	441.940855	1322.80073	0.44003	0.00019447	-2.9046	-0.0012837	-2.4646	-0.0010892	441.9393914889037	56.404	2.26	56.437	55.731	57.991	0.033184					145	81	3	0	0	0	0.75779	1	5140	5140		20.315	0	1	750870	+		39182	24196	26087	26099	44594	44594					0.15224577071035128
NRRSRQQR	8	Unmodified	_NRRSRQQR_					0	0	0			REV__ENST00000452508.6_1_11:108188209-108190710:+|nuORF	REV__ENST00000452508.6_1_11:108188209-108190710:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.8114624023438	2	550.810836	1099.60712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.027	1	60.994	60.494	61.494	-0.032509								0	0	0	0.30316	1	5780	5780		42.474	1.6963	1		+		39183	26897	26088	26100	44595	44595					0.06130040354810262
NRRTGTIL	8	Unmodified	_NRRTGTIL_					0	0	0		ENSG00000163536|ENST00000446050|SERPINI1;ENST00000488374.5_1_3:167517863-167543108:+|nuORF	ENSG00000163536|ENST00000446050|SERPINI1;ENST00000488374.5_1_3:167517863-167543108:+|nuORF	ENST00000488374.5_1_3:167517863-167543108:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77783203125	2	465.777608	929.540663	-1.4399	-0.00067067	1.3241	0.00061674	-0.1158	-5.3938E-05	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.82464	1	7665	7665		21.702	1.2205	1	287800			39184	5820;12625	26089	26101	44596	44596					0.07307411740191583
NRRTRNRRG	9	Unmodified	_NRRTRNRRG_					0	0	0			REV__nc|ENSG00000204851|Q9ULN7-1|PNMA8B	REV__nc|ENSG00000204851|Q9ULN7-1|PNMA8B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	593.846923828125	2	593.342835	1184.67112	-0.22642	-0.00013434	3.2752	0.0019433	3.0488	0.001809	593.3446713104415	103.73	2.3003	103.73	103.29	105.59	0					144	55	4	0	0	0	0.78058	1	10739	10739		30.504	1.3336	1	1751500	+		39185	23523	26090	26102	44597	44597					0.08616820511724654
NRRVQAPGIIK	11	Unmodified	_NRRVQAPGIIK_					0	0	0			REV__ENST00000441115.5_1_3:50000074-50009546:+|nuORF	REV__ENST00000441115.5_1_3:50000074-50009546:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3909301757812	2	626.385845	1250.75714	0.92654	0.00058037	-0.26319	-0.00016486	0.66335	0.00041551	626.3854005656832	109.98	1.1023	110.05	109.78	110.88	0.073685					78	37	4	0	0	0	0.73893	1	11812	11812		24.519	0	1	2583100	+		39186	26750	26091	26103	44598	44598					0.14178967573889167
NRRYHFLS	8	Unmodified	_NRRYHFLS_					0	0	0		nc|ENSG00000187045|Q8IU80-2|TMPRSS6	nc|ENSG00000187045|Q8IU80-2|TMPRSS6	nc|ENSG00000187045|Q8IU80-2|TMPRSS6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8401489257812	2	546.788507	1091.56246	3.3712	0.0018434	-0.0066909	-3.6585E-06	3.3646	0.0018397	546.7880180286511	100.97	0.61311	100.92	100.67	101.28	-0.052116					17	14	2	0	0	0	0.4196	1	10954	10954		50.025	4.0726	1	88958			39187	15164	26092	26104	44599	44599					0.020342164887551917
NRRYQRSL	8	Unmodified	_NRRYQRSL_					0	0	0		ENSG00000151655|ENST00000358415|ITIH2	ENSG00000151655|ENST00000358415|ITIH2	ENSG00000151655|ENST00000358415|ITIH2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8400268554688	2	546.804688	1091.59482	3.3963	0.0018571	0.76095	0.00041609	4.1572	0.0022732	546.8051514004072	101.27	0.12277	101.22	101.16	101.28	-0.049828					4	2	2	0	0	0	0.4196	1	11014	11014		24.203	0	1	39439			39188	5133	26093	26105	44600	44600					0.0526900389174898
NRSDCMAAN	9	Oxidation (M)	_NRSDCM(Oxidation (M))AAN_		NRSDCM(1)AAN		NRSDCM(42)AAN	0	0	1		nc|ENSG00000100346|Q9P0X4-2|CACNA1I;ENSG00000100346|ENST00000402142|CACNA1I;nc|ENSG00000100346|Q9P0X4-3|CACNA1I;nc|ENSG00000100346|Q9P0X4-4|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.1930847167969	2	499.194933	996.375313	0.63603	0.0003175	-4.4862	-0.0022395	-3.8501	-0.001922	499.1926971051662	95.97	0.73779	96.375	96.012	96.75	0.40451					55	17	4	0	0	0	0.67345	1	11548	11548		42.396	6.7778	1	1507600			39189	1830	26094	26106	44601	44601		35			-0.12301931173294633
NRSDCMAAN	9	Oxidation (M)	_NRSDCM(Oxidation (M))AAN_					0	0	1		nc|ENSG00000100346|Q9P0X4-2|CACNA1I;ENSG00000100346|ENST00000402142|CACNA1I;nc|ENSG00000100346|Q9P0X4-3|CACNA1I;nc|ENSG00000100346|Q9P0X4-4|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	499.194933	996.375313	-0.51927	-0.00025922	-3.0116	-0.0015034	-3.5309	-0.0017626	499.1932504583651	95.703	0.84459	95.934	95.55	96.395	0.23103	-0.22731	0.001209	NaN	42.396	34	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79462			39190	1830	26094	26106				35			-0.12301931173294633
NRSDCMAAN	9	Oxidation (M)	_NRSDCM(Oxidation (M))AAN_					0	0	1		nc|ENSG00000100346|Q9P0X4-2|CACNA1I;ENSG00000100346|ENST00000402142|CACNA1I;nc|ENSG00000100346|Q9P0X4-3|CACNA1I;nc|ENSG00000100346|Q9P0X4-4|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	499.194933	996.375313	0.75809	0.00037843	-4.4212	-0.002207	-3.6631	-0.0018286	499.1926306993973	95.878	1.5786	96.041	95.474	97.052	0.16316	-0.12012	-0.00019833	NaN	42.396	43	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102790			39191	1830	26094	26106				35			-0.12301931173294633
NRSGVSPKL	9	Unmodified	_NRSGVSPKL_					0	0	0			REV__nc|ENSG00000089177|Q96L93-2|KIF16B	REV__nc|ENSG00000089177|Q96L93-2|KIF16B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27740478515625	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.68711	1	8166	8166		41.427	1.3684	1	2046100	+		39192	29720	26095	26107	44602	44602					0.06031992020314192
NRSHRRTP	8	Unmodified	_NRSHRRTP_					0	0	0		nc|ENSG00000158560|O14576-4|DYNC1I1;nc|ENSG00000158560|O14576-3|DYNC1I1;nc|ENSG00000158560|O14576-5|DYNC1I1;ENSG00000158560|ENST00000447467|DYNC1I1;nc|ENSG00000158560|O14576|DYNC1I1	nc|ENSG00000158560|O14576-4|DYNC1I1	nc|ENSG00000158560|O14576-4|DYNC1I1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2823486328125	2	512.28138	1022.54821	0.38138	0.00019537	-0.44678	-0.00022888	-0.065404	-3.3505E-05	512.2810762358159	86.258	3.4931	86.314	85.063	88.556	0.055649					143	81	2	0	0	0	0.884	1	8798	8798		33.516	1.9858	1	344420			39193	5488	26096	26108	44603	44603					0.037835640604725995
NRSPPHLIKEI	11	Unmodified	_NRSPPHLIKEI_					0	0	0		ENSG00000136542|ENST00000259056|GALNT5	ENSG00000136542|ENST00000259056|GALNT5	ENSG00000136542|ENST00000259056|GALNT5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.2157287597656	3	435.254216	1302.74082	0.41673	0.00018138	-2.1746	-0.00094652	-1.7579	-0.00076514	435.25328205495515	19.243	0.35723	18.613	18.444	18.801	-0.62961					16	7	3	0	0	0	0.17648	1	496	496		33.039	15.206	1	57055			39194	4119	26097	26109	44604	44604					0.10155841617120132
NRSPPHLIKEI	11	Unmodified	_NRSPPHLIKEI_					0	0	0		ENSG00000136542|ENST00000259056|GALNT5	ENSG00000136542|ENST00000259056|GALNT5	ENSG00000136542|ENST00000259056|GALNT5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	435.254216	1302.74082	0.47192	0.00020541	-2.5197	-0.0010967	-2.0478	-0.0008913	435.25311534643373	19.087	0.38048	18.615	18.362	18.743	-0.47201	0.00083159	-0.00014987	NaN	37.6	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69822			39195	4119	26097	26109							0.10155841617120132
NRSRAIVQR	9	Unmodified	_NRSRAIVQR_					0	0	0		nc|ENSG00000172943|Q9UPP1-3|PHF8;nc|ENSG00000172943|Q9UPP1|PHF8	nc|ENSG00000172943|Q9UPP1-3|PHF8	nc|ENSG00000172943|Q9UPP1-3|PHF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3265380859375	2	550.325788	1098.63702	0.24684	0.00013584	2.2906	0.0012606	2.5375	0.0013964	550.327086838159	99.973	1.2029	100.19	99.606	100.81	0.21511					73	27	4	0	0	0	0.74721	1	10391	10391		37.159	2.9866	1	361560			39196	15099	26098	26110	44605	44605					0.09164979300135201
NRSRAIVQR	9	Unmodified	_NRSRAIVQR_					0	0	0		nc|ENSG00000172943|Q9UPP1-3|PHF8;nc|ENSG00000172943|Q9UPP1|PHF8	nc|ENSG00000172943|Q9UPP1-3|PHF8	nc|ENSG00000172943|Q9UPP1-3|PHF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3275756835938	2	550.325788	1098.63702	-1.4511	-0.00079856	3.681	0.0020257	2.2299	0.0012272	550.3279242402356	100.07	1.1382	100.24	99.716	100.85	0.17199					63	25	3	0	0	0	0.78536	1	10395	10395		29.15	1.2673	1	345000			39197	15099	26098	26110	44606	44606					0.09164979300135201
NRSSTLNTH	9	Unmodified	_NRSSTLNTH_					0	0	0		ENSG00000153266|ENST00000283268|FEZF2;nc|ENSG00000128610|A0PJY2-2|FEZF1;nc|ENSG00000128610|A0PJY2-3|FEZF1;ENSG00000128610|ENST00000442488|FEZF1	ENSG00000153266|ENST00000283268|FEZF2	ENSG00000153266|ENST00000283268|FEZF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.2581176757812	2	515.257237	1028.49992	0.13046	6.7222E-05	2.6118	0.0013458	2.7423	0.001413	515.2584127497981	72.107	1.0743	72.657	72.154	73.228	0.55008					57	25	3	0	0	0	0.51307	1	8069	8069		51.335	0	1	386880			39198	5227	26099	26111	44607	44607					-0.013189743700877443
NRSSVHEFLD	10	Unmodified	_NRSSVHEFLD_					0	0	0			REV__ENSG00000145555|ENST00000513610|MYO10	REV__ENSG00000145555|ENST00000513610|MYO10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	601.2946166992188	2	602.291276	1202.568	0.71176	0.00042869	-3.2526	-0.001959	-2.5409	-0.0015304	602.2891071081209	77.809	1.0302	78.214	77.851	78.882	0.4053					46	24	3	0	0	0	0.37624	1	8945	8945		64.207	14.671	1	229270	+		39199	19952	26100	26112	44608	44608					-0.025181495100923712
NRSSVHEFLD	10	Unmodified	_NRSSVHEFLD_					0	0	0			REV__ENSG00000145555|ENST00000513610|MYO10	REV__ENSG00000145555|ENST00000513610|MYO10	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	602.291276	1202.568	-0.15186	-9.1466E-05	-2.3091	-0.0013908	-2.461	-0.0014822	602.2897911434545	77.697	0.74118	78.265	77.923	78.664	0.56836	0.0254	0.00069622	NaN	64.207	30	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	251310	+		39200	19952	26100	26112							-0.025181495100923712
NRSYFLTIP	9	Unmodified	_NRSYFLTIP_					0	0	0		ENSG00000106733|ENST00000361092|NMRK1	ENSG00000106733|ENST00000361092|NMRK1	ENSG00000106733|ENST00000361092|NMRK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.801025390625	2	555.800749	1109.58694	0.4874	0.0002709	-0.089411	-4.9695E-05	0.39799	0.0002212	555.8004545087744	48.238	0.50508	48.236	48.022	48.527	-0.002449					20	11	2	0	0	0	0.77696	1	4022	4022		31.53	0	1	117560			39201	2315	26101	26113	44609	44609					0.03653431851603273
NRTGGSAH	8	Unmodified	_NRTGGSAH_					0	0	0		CON__P15636	CON__P15636	CON__P15636	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.196533203125	2	400.193908	798.373263	-0.18716	-7.4901E-05	2.8757	0.0011508	2.6886	0.0010759	400.1952819307741	86.353	1.3706	86.421	85.987	87.357	0.067444					79	31	5	0	0	0	0.91472	1	8749	8749		44.117	14.967	1	2357200		+	39202	593	26102	26114	44610	44610					-0.03398855804584855
NRTGGSAH	8	Unmodified	_NRTGGSAH_					0	0	0		CON__P15636	CON__P15636	CON__P15636	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.1962890625	2	400.193908	798.373263	0.51059	0.00020433	3.3623	0.0013456	3.8729	0.0015499	400.1955363705816	82.964	1.6149	82.898	82.456	84.071	-0.066185					89	37	4	0	0	0	0.92457	1	8420	8420		47.916	5.5195	1	4296700		+	39203	593	26102	26114	44611	44611					-0.03398855804584855
NRTGGSAH	8	Unmodified	_NRTGGSAH_					0	0	0		CON__P15636	CON__P15636	CON__P15636	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.197021484375	2	400.193908	798.373263	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87	1	87.056	86.556	87.556	0.055649								0	0	0	0.29816	1	8883	8883		38.806	1.647	1			+	39204	593	26102	26114	44612	44612					-0.03398855804584855
NRTGGSAH	8	Unmodified	_NRTGGSAH_					0	0	0		CON__P15636	CON__P15636	CON__P15636	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.19659423828125	2	400.193908	798.373263	0.60168	0.00024079	3.2716	0.0013093	3.8733	0.0015501	400.19549041096013	86.068	1.3495	86.217	85.858	87.207	0.14902					77	31	4	0	0	0	0.884	2	8507	8507;8520		38.806	6.7195	1	5538900		+	39205	593	26102	26114	44613;44614	44613					-0.03398855804584855
NRTIPVVAR	9	Unmodified	_NRTIPVVAR_					0	0	0			REV__ENST00000511633.5_1_4:170533254-170533704:-|nuORF	REV__ENST00000511633.5_1_4:170533254-170533704:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3184814453125	2	513.314358	1024.61416	0.32644	0.00016757	4.3048	0.0022097	4.6312	0.0023773	513.3163953254575	46.467	0.87729	46.505	46.157	47.034	0.038181					39	23	2	0	0	0	0.77696	1	3413	3413		31.53	2.3803	1	188460	+		39206	26728	26103	26115	44615	44615					0.10283960182641749
NRTKQRHL	8	Unmodified	_NRTKQRHL_					0	0	0		ENST00000392455.7_2_3:191114417-191114504:+|nuORF	ENST00000392455.7_2_3:191114417-191114504:+|nuORF	ENST00000392455.7_2_3:191114417-191114504:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	527.3055419921875	2	526.807231	1051.59991	-1.5276	-0.00080476	-2.4473	-0.0012893	-3.975	-0.002094	526.8081287810614	99.219	1.531	99.405	98.808	100.34	0.18581					123	35	5	0	0	0	0.86677	1	10239	10239		27.882	2.4321	1	2548800			39207	11022	26104	26116	44616	44616					0.07617307754367175
NRTNCGFPG	9	Unmodified	_NRTNCGFPG_					0	0	0		ENSG00000160181|ENST00000291526|TFF2	ENSG00000160181|ENST00000291526|TFF2	ENSG00000160181|ENST00000291526|TFF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.2185974121094	2	483.216526	964.418499	-0.81811	-0.00039532	4.06	0.0019619	3.2419	0.0015665	483.2184777480196	93.018	1.1303	93.468	92.947	94.077	0.44988					78	26	4	0	0	0	0.55097	1	11106	11106		49.442	13.823	1	697510			39208	5559	26105	26117	44617	44617					-0.06513373333689287
NRTNCGFPG	9	Unmodified	_NRTNCGFPG_					0	0	0		ENSG00000160181|ENST00000291526|TFF2	ENSG00000160181|ENST00000291526|TFF2	ENSG00000160181|ENST00000291526|TFF2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	483.216526	964.418499	0.71673	0.00034634	2.6248	0.0012684	3.3416	0.0016147	483.21781301704885	93.012	0.69705	93.171	92.919	93.616	0.15875	-0.13765	-0.00014223	NaN	49.442	21	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112950			39209	5559	26105	26117							-0.06513373333689287
NRTNCGFPG	9	Unmodified	_NRTNCGFPG_					0	0	0		ENSG00000160181|ENST00000291526|TFF2	ENSG00000160181|ENST00000291526|TFF2	ENSG00000160181|ENST00000291526|TFF2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	483.216526	964.418499	-1.6696	-0.00080679	4.724	0.0022827	3.0543	0.0014759	483.218701775179	93.08	0.61539	93.273	92.904	93.519	0.19239	-0.035872	0.0018864	NaN	49.442	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79969			39210	5559	26105	26117							-0.06513373333689287
NRTSQKIK	8	Unmodified	_NRTSQKIK_					0	0	0			REV__ENST00000540226.1_1_12:215852-215996:-|nuORF	REV__ENST00000540226.1_1_12:215852-215996:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.79046630859375	2	487.790715	973.566878	0.6235	0.00030414	-1.3362	-0.00065176	-0.71266	-0.00034763	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.86288	1	7854	7854		26.796	0	1	479320	+		39211	28459	26106	26118	44618	44618					0.07903680911658739
NRTVLLYAI	9	Unmodified	_NRTVLLYAI_					0	0	0			REV__ENSG00000186567|ENST00000358777|CEACAM19	REV__ENSG00000186567|ENST00000358777|CEACAM19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8175048828125	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.76255	1	8340	8340		35.618	3.6634	1	1159800	+		39212	22864	26107	26119	44619	44619					0.09498308748334239
NRTVSKILG	9	Unmodified	_NRTVSKILG_					0	0	0		ENSG00000079432|ENST00000681038|CIC;nc|ENSG00000079432|Q96RK0-2|CIC	ENSG00000079432|ENST00000681038|CIC	ENSG00000079432|ENST00000681038|CIC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3007507324219	2	494.300916	986.587279	0.76681	0.00037903	-1.1549	-0.00057088	-0.38812	-0.00019185	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.64922	1	10202	10202		44.117	1.7207	1	52135000			39213	1421	26108	26120	44620	44620					0.09344851571472645
NRVARSYLMA	10	Unmodified	_NRVARSYLMA_					0	0	0			REV__ENST00000598240.1_1_19:19105804-19136912:-|nuORF	REV__ENST00000598240.1_1_19:19105804-19136912:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.86669921875	2	590.816407	1179.61826	-0.77886	-0.00046016	-1.0198	-0.00060253	-1.7987	-0.0010627	590.8162010254993	103.55	0.517	103.59	103.36	103.87	0.041489					22	12	2	0	0	0	0.37624	1	11262	11262		56.721	8.7615	1	105250	+		39214	16479	26109	26121	44621	44621					0.03563681614059533
NRVGILFIVC	10	Unmodified	_NRVGILFIVC_					0	0	0		ENST00000392876.7_1_12:104169265-104169487:-|nuORF	ENST00000392876.7_1_12:104169265-104169487:-|nuORF	ENST00000392876.7_1_12:104169265-104169487:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3294677734375	2	567.328619	1132.64269	0.79571	0.00045143	1.1706	0.0006641	1.9663	0.0011155	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.86201	1	9784	9784		24.203	1.1603	1	18145000			39215	11034	26110	26122	44622	44622					0.08166941767581193
NRVGILFIVC	10	Unmodified	_NRVGILFIVC_					0	0	0		ENST00000392876.7_1_12:104169265-104169487:-|nuORF	ENST00000392876.7_1_12:104169265-104169487:-|nuORF	ENST00000392876.7_1_12:104169265-104169487:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3297729492188	2	567.328619	1132.64269	1.3743	0.0007797	1.0283	0.00058341	2.4027	0.0013631	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.86305	2	10859	10859;11293		31.955	4.9296	1	6182600			39216	11034	26110	26122	44623;44624	44623					0.08166941767581193
NRVIHRDLK	9	Unmodified	_NRVIHRDLK_					0	0	0		ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENSG00000166851|ENST00000300093|PLK1	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8429565429688	2	575.843813	1149.67307	-0.49921	-0.00028747	-0.94267	-0.00054283	-1.4419	-0.0008303	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.69624	1	8804	8804		40.778	0.20554	1	1518700			39217	13846	26111	26123	44625	44625					0.10422436476960684
NRVLIKSTT	9	Unmodified	_NRVLIKSTT_					0	0	0			REV__ENSG00000122965|ENST00000261741|RBM19	REV__ENSG00000122965|ENST00000261741|RBM19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3143920898438	2	516.314023	1030.61349	-0.68072	-0.00035146	0.32195	0.00016623	-0.35876	-0.00018524	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.74721	1	10180	10180		37.159	0	1	39641000	+		39218	18520	26112	26124	44626	44626					0.09941120742928433
NRVLIKSTT	9	Unmodified	_NRVLIKSTT_					0	0	0			REV__ENSG00000122965|ENST00000261741|RBM19	REV__ENSG00000122965|ENST00000261741|RBM19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3154907226562	2	516.314023	1030.61349	3.1012	0.0016012	-3.1554	-0.0016292	-0.054235	-2.8002E-05	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.78536	1	12577	12577		29.15	0	1	1162600	+		39219	18520	26112	26124	44627	44627					0.09941120742928433
NRVLIKSTT	9	Unmodified	_NRVLIKSTT_					0	0	0			REV__ENSG00000122965|ENST00000261741|RBM19	REV__ENSG00000122965|ENST00000261741|RBM19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3143310546875	2	516.314023	1030.61349	-0.25799	-0.00013321	-0.28251	-0.00014586	-0.5405	-0.00027907	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.74721	1	10231	10231		37.159	5.2042	1	82226000	+		39220	18520	26112	26124	44628	44628					0.09941120742928433
NRVLIKSTT	9	Unmodified	_NRVLIKSTT_					0	0	0			REV__ENSG00000122965|ENST00000261741|RBM19	REV__ENSG00000122965|ENST00000261741|RBM19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.313720703125	2	516.314023	1030.61349	-1.5618	-0.0008064	1.5892	0.00082053	0.027358	1.4125E-05	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.7932	1	10757	10757		23.042	0	1	1268100	+		39221	18520	26112	26124	44629	44629					0.09941120742928433
NRVLIKSTT	9	Unmodified	_NRVLIKSTT_					0	0	0			REV__ENSG00000122965|ENST00000261741|RBM19	REV__ENSG00000122965|ENST00000261741|RBM19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.314208984375	2	516.314023	1030.61349	1.9037	0.0009829	-1.9331	-0.0009981	-0.029436	-1.5198E-05	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.76255	1	11920	11920		35.618	1.4457	1	22616000	+		39222	18520	26112	26124	44630	44630					0.09941120742928433
NRVLIKSTT	9	Unmodified	_NRVLIKSTT_					0	0	0			REV__ENSG00000122965|ENST00000261741|RBM19	REV__ENSG00000122965|ENST00000261741|RBM19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3138427734375	2	516.314023	1030.61349	1.791	0.00092474	-1.8271	-0.00094338	-0.036105	-1.8641E-05	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.74721	1	11940	11940		37.159	0	1	24820000	+		39223	18520	26112	26124	44631	44631					0.09941120742928433
NRVLYPVAS	9	Unmodified	_NRVLYPVAS_					0	0	0		nc|ENSG00000171100|Q13496-2|MTM1;ENSG00000171100|ENST00000370396|MTM1	nc|ENSG00000171100|Q13496-2|MTM1	nc|ENSG00000171100|Q13496-2|MTM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.80352783203125	2	509.787641	1017.56073	-1.5461	-0.0007882	-3.455	-0.0017613	-5.0011	-0.0025495	509.7851356168756	87.023	0.56456	87.187	86.695	87.259	0.16473					15	12	2	0	0	0	0.20789	1	8501	8501		45.952	13.997	1	51028			39224	6638	26113	26125	44632	44632					0.05265162680143476
NRVVPGCV	8	Unmodified	_NRVVPGCV_					0	0	0		ENSG00000119973|ENST00000239032|PRLHR	ENSG00000119973|ENST00000239032|PRLHR	ENSG00000119973|ENST00000239032|PRLHR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.22802734375	2	422.228905	842.443257	-0.43207	-0.00018243	-1.7314	-0.00073105	-2.1635	-0.00091348	422.22809047109115	56.24	1.4602	56.212	54.83	56.29	-0.027279					81	44	2	0	0	0	0.83466	1	5142	5142		23.037	1.3344	1	812940			39225	3106	26114	26126	44633	44633					0.01573306539683017
NRVYVIFDL	9	Unmodified	_NRVYVIFDL_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.8190307617188	2	569.816399	1137.61824	-1.0016	-0.00057072	2.3286	0.0013269	1.327	0.00075617	569.8176061903462	58.45	1.0406	58.45	57.91	58.951	0					67	44	2	0	0	0	0.78983	1	5062	5062		27.882	0	1	76918			39226	961	26115	26127	44634	44634					0.054940048857361035
NRWLWRRRPWL	11	Unmodified	_NRWLWRRRPWL_					0	0	0		chr12:54282932-54283079|63|29.79|0.0|21.51|+|1|HNRNPA1,HNRNPA1|2	chr12:54282932-54283079|63|29.79|0.0|21.51|+|1|HNRNPA1,HNRNPA1|2	chr12:54282932-54283079|63|29.79|0.0|21.51|+|1|HNRNPA1,HNRNPA1|2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8401489257812	3	546.979532	1637.91677	0.84803	0.00046385	2.1977	0.0012021	3.0457	0.0016659	547.3160588825227	100.74	0.28371	100.88	100.69	100.97	0.14352					9	6	2	0	0	0	0.18304	1	10531	10531		10.104	4.1029	1	75965			39227	133	26116	26128	44635	44635					0.12332520641712108
NRYFSMTL	8	Unmodified	_NRYFSMTL_					0	0	0			REV__nc|ENSG00000129219|O14939-4|PLD2	REV__nc|ENSG00000129219|O14939-4|PLD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.2517700195312	2	516.252577	1030.4906	0.44513	0.0002298	1.9006	0.00098118	2.3457	0.001211	516.2533929637456	28.307	0.4985	28.284	28.115	28.613	-0.023556					16	11	2	0	0	0	0.86288	1	1357	1357		26.796	2.2769	1	32698	+		39228	18812	26117	26129	44636	44636					-0.02342458979978801
NRYKQLLTYIR	11	Unmodified	_NRYKQLLTYIR_					0	0	0		nc|ENSG00000166200|P61201-2|COPS2;ENSG00000166200|ENST00000388901|COPS2;ENST00000558545.1_1_15:49431640-49447775:-|nuORF	nc|ENSG00000166200|P61201-2|COPS2	nc|ENSG00000166200|P61201-2|COPS2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.9553527832031	3	489.952537	1466.83578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.358	1	62.479	61.979	62.979	0.1209								0	0	0	0.56276	1	5434	5434		13.508	0.55046	1				39229	6170	26118	26130	44637	44637					0.12103775088303337
NRYLLILSW	9	Unmodified	_NRYLLILSW_					0	0	0			REV__ENST00000341285.7_2_4:15627015-15627129:-|nuORF	REV__ENST00000341285.7_2_4:15627015-15627129:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427124023438	2	589.340041	1176.66553	0.81285	0.00047905	3.7357	0.0022016	4.5485	0.0026806	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.72402	1	9296	9296		38.806	0.99462	1	6450100	+		39230	25256	26119	26131	44638	44638					0.08426284156712427
NRYLLVMKGA	10	Unmodified	_NRYLLVMKGA_					0	0	0		ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3	ENSG00000105409|ENST00000648268|ATP1A3	ENSG00000105409|ENST00000648268|ATP1A3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.83447265625	2	582.831526	1163.6485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.295	1	94.728	94.228	95.228	0.4324								0	0	0	0.45132	1	11252	11252		20.947	0	1				39231	2214	26120	26132	44639	44639					0.07322040279245812
NRYRVHFV	8	Unmodified	_NRYRVHFV_					0	0	0		ENST00000531140.1_1_11:121174081-121177378:+|nuORF	ENST00000531140.1_1_11:121174081-121177378:+|nuORF	ENST00000531140.1_1_11:121174081-121177378:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3173828125	2	545.798875	1089.5832	-0.62621	-0.00034179	-4.189	-0.0022864	-4.8152	-0.0026281	545.7965249675742	92.548	1.6396	92.548	92.199	93.839	0					57	37	2	0	0	0	0.4196	1	9115	9115		35.201	15.841	1	79943			39232	13353	26121	26133	44640	44640					0.04198806868407701
NSAALLPH	8	Unmodified	_NSAALLPH_					0	0	0			REV__chr2:187560873-187565550|14|20.43|0.0|20.96|-|1|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|8	REV__chr2:187560873-187565550|14|20.43|0.0|20.96|-|1|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.7271423339844	2	411.727052	821.439552	0.12127	4.9929E-05	-1.4911	-0.00061393	-1.3698	-0.000564	411.72626689698353	63.154	0.99355	63.542	63.055	64.049	0.3878					36	22	2	0	0	0	0.89457	1	6785	6785		37.028	6.5248	1	173990	+		39233	15741	26122	26134	44641	44641					0.021689600374770635
NSAASRRSP	9	Unmodified	_NSAASRRSP_					0	0	0		nc|ENSG00000139163|Q9HBU6-2|ETNK1;nc|ENSG00000139163|Q9HBU6|ETNK1	nc|ENSG00000139163|Q9HBU6-2|ETNK1	nc|ENSG00000139163|Q9HBU6-2|ETNK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.248291015625	2	473.246672	944.478791	0.34188	0.00016179	2.651	0.0012546	2.9929	0.0014164	473.24782054202086	28.883	1.4946	28.914	28.31	29.804	0.030945					99	51	4	0	0	0	0.77696	1	1430	1430		31.53	2.3803	1	514570			39234	14955	26123	26135	44642	44642					0.004330603210519257
NSAATAEKW	9	Unmodified	_NSAATAEKW_					0	0	0		ENSG00000175264|ENST00000308064|CHST1	ENSG00000175264|ENST00000308064|CHST1	ENSG00000175264|ENST00000308064|CHST1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.2353515625	2	489.237981	976.461409	-0.72549	-0.00035494	-2.4583	-0.0012027	-3.1838	-0.0015576	489.23682827265793	62.903	2.2218	63.017	62.721	64.943	0.11388					298	98	5	0	0	0	0.78536	1	5616	5616		29.15	4.9468	1	3506900			39235	7002	26124	26136	44643	44643					-0.02776280004616183
NSACLLEQEL	10	Unmodified	_NSACLLEQEL_					0	0	0			REV__nc|ENSG00000127914|Q99996-5|AKAP9	REV__nc|ENSG00000127914|Q99996-5|AKAP9	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.2698364257812	2	560.271164	1118.52777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.038	1	51.073	50.573	51.573	0.034588								0	0	0	0.45132	1	4041	4041		29.17	0.020503	1		+		39236	18753	26125	26137	44644	44644					-0.0267483222487499
NSAGLLRLN	9	Unmodified	_NSAGLLRLN_					0	0	0			REV__ENST00000606150.5_1_6:13281194-13295113:-|nuORF	REV__ENST00000606150.5_1_6:13281194-13295113:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2777404785156	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.67345	1	8947	8947		42.396	3.59	1	7289200	+		39237	29366	26126	26138	44645	44645					0.060319920203255606
NSAGLLRLN	9	Unmodified	_NSAGLLRLN_					0	0	0			REV__ENST00000606150.5_1_6:13281194-13295113:-|nuORF	REV__ENST00000606150.5_1_6:13281194-13295113:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2778625488281	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.7932	1	7706	7706		26.693	2.1737	1	2142700	+		39238	29366	26126	26138	44646	44646					0.060319920203255606
NSAGLLRLN	9	Unmodified	_NSAGLLRLN_					0	0	0			REV__ENST00000606150.5_1_6:13281194-13295113:-|nuORF	REV__ENST00000606150.5_1_6:13281194-13295113:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2779846191406	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.69624	1	7776	7776		40.778	5.1599	1	1802300	+		39239	29366	26126	26138	44647	44647					0.060319920203255606
NSAGLLRLN	9	Unmodified	_NSAGLLRLN_					0	0	0			REV__ENST00000606150.5_1_6:13281194-13295113:-|nuORF	REV__ENST00000606150.5_1_6:13281194-13295113:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27740478515625	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.44421	1	7818	7818		54.776	3.4409	1	1785900	+		39240	29366	26126	26138	44648	44648					0.060319920203255606
NSAIVNNI	8	Unmodified	_NSAIVNNI_					0	0	0			REV__ENSG00000139610|ENST00000293636|CELA1	REV__ENSG00000139610|ENST00000293636|CELA1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.2284851074219	2	422.729792	843.445031	1.3457	0.00056889	-1.276	-0.00053941	0.069739	2.9481E-05	422.7290179072171	63.725	0.63353	63.752	63.43	64.064	0.027138					29	21	2	0	0	0	0.4196	1	6015	6015		26.693	0	1	113260	+		39241	19553	26127	26139	44649	44649					0.017046388292897063
NSAKMALY	8	Unmodified	_NSAKMALY_					0	0	0		ENSG00000101680|ENST00000389658|LAMA1;ENST00000579014.5_1_18:6942080-7042306:-|nuORF	ENSG00000101680|ENST00000389658|LAMA1	ENSG00000101680|ENST00000389658|LAMA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2324523925781	2	449.228571	896.442588	0.59617	0.00026782	3.8501	0.0017296	4.4462	0.0019974	449.2302610410389	83.151	3.4859	83.298	82.027	85.513	0.14694					178	80	3	0	0	0	0.884	1	8136	8136		33.516	6.7195	1	225870			39242	1955	26128	26140	44650	44650					-0.0097753290002629
NSAKQRES	8	Unmodified	_NSAKQRES_					0	0	0			REV__nc|ENSG00000188994|O60281-2|ZNF292	REV__nc|ENSG00000188994|O60281-2|ZNF292	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.260498046875	2	460.23323	918.451907	0.7316	0.00033671	3.6119	0.0016623	4.3435	0.001999	460.23479435061085	28.489	0.71178	28.316	28.091	28.803	-0.17336					24	17	2	0	0	0	0.4196	1	1779	1779		12.207	5.0135	1	72026	+		39243	23052	26129	26141	44651	44651					-0.010580482901445976
NSAKQRES	8	Unmodified	_NSAKQRES_					0	0	0			REV__nc|ENSG00000188994|O60281-2|ZNF292	REV__nc|ENSG00000188994|O60281-2|ZNF292	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	460.23323	918.451907	-1.2325	-0.00056722	5.4533	0.0025098	4.2208	0.0019426	460.23539926311804	28.373	0.66235	28.276	28.049	28.711	-0.096947	-0.019569	0.0007042	NaN	7.1934	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74132	+		39244	23052	26129	26141							-0.010580482901445976
NSALVPLH	8	Unmodified	_NSALVPLH_					0	0	0			REV__ENST00000486462.1_1_22:17618913-17622310:-|nuORF	REV__ENST00000486462.1_1_22:17618913-17622310:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	425.7417907714844	2	425.742702	849.470852	-1.7268	-0.00073517	0.555	0.00023629	-1.1718	-0.00049889	425.74283630510183	79.031	1.0392	79.162	78.82	79.859	0.13086					48	32	2	0	0	0	0.884	1	7478	7478		33.516	5.2613	1	258580	+		39245	16590	26130	26142	44652	44652					0.04009533071575788
NSAPIMRY	8	Unmodified	_NSAPIMRY_					0	0	0			REV__ENSG00000156564|ENST00000338305|LRFN2	REV__ENSG00000156564|ENST00000338305|LRFN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.2389221191406	2	476.23947	950.464386	-1.0322	-0.0004916	-0.48825	-0.00023252	-1.5205	-0.00072412	476.23913752995605	58.622	1.3452	59.175	58.347	59.692	0.55323					54	32	2	0	0	0	0.89494	1	6110	6110		37.159	6.6555	1	795510	+		39246	20497	26131	26143	44653	44653					-0.012827281514546485
NSARIRWVVGG	11	Unmodified	_NSARIRWVVGG_					0	0	0			REV__ENSG00000109670|ENST00000281708|FBXW7	REV__ENSG00000109670|ENST00000281708|FBXW7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5640869140625	3	405.563273	1213.66799	-0.18878	-7.6562E-05	3.952	0.0016028	3.7632	0.0015262	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.72918	1	5908	5908		17.833	2.4957	1	257140	+		39247	17765	26132	26144	44654	44654					0.06970132614355862
NSARTRLI	8	Unmodified	_NSARTRLI_					0	0	0			REV__ENST00000219789.10_1_16:29870206-29870488:-|nuORF	REV__ENST00000219789.10_1_16:29870206-29870488:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7768859863281	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.689	1	79.689	79.189	80.189	0								0	0	0	0.29245	1	7334	7334		30.504	5.0535	1		+		39248	24149	26133	26145	44655	44655					0.07307411740168845
NSATAWRKAF	10	Unmodified	_NSATAWRKAF_					0	0	0		ENSG00000204688|ENST00000377133|OR2H1	ENSG00000204688|ENST00000377133|OR2H1	ENSG00000204688|ENST00000377133|OR2H1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	576.30078125	2	576.301447	1150.58834	-1.0169	-0.00058602	0.43657	0.0002516	-0.58028	-0.00033442	576.301651158032	55.121	0.77128	55.121	54.846	55.617	0					39	23	2	0	0	0	0.44803	1	4651	4651		60.118	3.6845	1	294640			39249	8478	26134	26146	44656	44656					0.019070659403496393
NSAVLGNILRN	11	Unmodified	_NSAVLGNILRN_					0	0	0			REV__ENSG00000115850|ENST00000264162|LCT	REV__ENSG00000115850|ENST00000264162|LCT	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.8304443359375	2	585.833111	1169.65167	-0.9232	-0.00054084	-3.7775	-0.002213	-4.7007	-0.0027538	585.8307293050794	57.888	1.4017	57.888	57.479	58.881	0					105	56	3	0	0	0	0.51007	1	5002	5002		51.193	18.442	1	164040	+		39250	18156	26135	26147	44657	44657					0.07363006657601545
NSAVLGNILRN	11	Unmodified	_NSAVLGNILRN_					0	0	0			REV__ENSG00000115850|ENST00000264162|LCT	REV__ENSG00000115850|ENST00000264162|LCT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	585.831298828125	2	585.833111	1169.65167	-0.75038	-0.0004396	-4.205	-0.0024634	-4.9553	-0.002903	585.8305676475687	57.715	1.3345	57.701	57.24	58.574	-0.013641					81	46	2	0	0	0	0.55601	1	5240	5240		47.96	0.30219	1	146910	+		39251	18156	26135	26147	44658	44658					0.07363006657601545
NSAVPARRTQ	10	Unmodified	_NSAVPARRTQ_					0	0	0		ENST00000262370.11_1_16:4739122-4739782:+|nuORF	ENST00000262370.11_1_16:4739122-4739782:+|nuORF	ENST00000262370.11_1_16:4739122-4739782:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3030395507812	2	550.301978	1098.5894	-0.16311	-8.9759E-05	3.9211	0.0021578	3.758	0.002068	550.3039343164278	22	0.63786	21.39	21.072	21.71	-0.6107					31	15	3	0	0	0	0.86106	1	867	867		33.922	3.418	1	239270			39252	9435	26136	26148	44659	44659					0.04405280309288173
NSCCLCCH	8	Unmodified	_NSCCLCCH_					0	0	0		nc|ENSG00000104341|Q86VI4|LAPTM4B;ENSG00000104341|ENST00000521545|LAPTM4B	nc|ENSG00000104341|Q86VI4|LAPTM4B	nc|ENSG00000104341|Q86VI4|LAPTM4B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7881774902344	2	441.639894	881.265234	-0.48863	-0.0002158	0.8213	0.00036272	0.33267	0.00014692	441.6376092353298	37.981	0.1508	38.294	38.2	38.35	0.31312					5	3	2	0	0	0	0.4196	1	3079	3079		3.9852	0	1	29835			39253	14827	26137	26149	44660	44660					-0.18014771037678656
NSCCSRTVV	9	Unmodified	_NSCCSRTVV_					0	0	0		nc|ENSG00000161652|Q6UXV1-2|IZUMO2	nc|ENSG00000161652|Q6UXV1-2|IZUMO2	nc|ENSG00000161652|Q6UXV1-2|IZUMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7183837890625	2	484.718044	967.421535	1.8339	0.00088894	-1.8419	-0.00089281	-0.0079839	-3.8699E-06	484.717227769282	100.08	1.4855	100.42	100.11	101.59	0.3459					119	38	5	0	0	0	0.64922	1	12301	12301		44.117	3.3386	1	10268000			39254	15041	26138	26150	44661	44661					-0.06347866271187286
NSCIMIYS	8	Unmodified	_NSCIMIYS_					0	0	0		ENST00000460064.1_1_3:191078900-191087884:+|nuORF	ENST00000460064.1_1_3:191078900-191087884:+|nuORF	ENST00000460064.1_1_3:191078900-191087884:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7045593261719	2	465.706614	929.398675	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.396	1	47.393	46.893	47.893	-0.0029907								0	0	0	0.29403	1	3885	3885		32.812	3.6629	1				39255	12001	26139	26151	44662	44662					-0.06884885388660678
NSCRILVP	8	Unmodified	_NSCRILVP_					0	0	0		nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.2484130859375	2	451.249837	900.485122	0.1709	7.7119E-05	-2.215	-0.00099951	-2.0441	-0.0009224	451.24869628583264	62.968	1.2225	63.523	62.907	64.129	0.55449					64	28	3	0	0	0	0.84341	1	6755	6755		24.203	1.1603	1	464750			39256	4093	26140	26152	44663	44663					0.03089862228216589
NSCVHISLR	9	Carbamidomethyl (C)	_NSC(Carbamidomethyl (C))VHISLR_	NSC(1)VHISLR		NSC(48)VHISLR		0	1	0			REV__ENST00000592659.1_1_19:11688743-11689709:-|nuORF	REV__ENST00000592659.1_1_19:11688743-11689709:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	542.804931640625	2	543.279657	1084.54476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.758	1	71.836	71.336	72.336	0.078255								0	0	0	0.34972	1	6521	6521		47.657	6.8792	1		+		39257	29193	26141	26153	44664	44664	352				0.0058713317157526035
NSDEEDNDDSD	11	Unmodified	_NSDEEDNDDSD_					0	0	0		nc|ENSG00000118729|O14958-2|CASQ2;ENSG00000118729|ENST00000261448|CASQ2	nc|ENSG00000118729|O14958-2|CASQ2	nc|ENSG00000118729|O14958-2|CASQ2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.7991943359375	3	418.800736	1253.38038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.265	1	66.23	65.73	66.73	-0.035217								0	0	0	0.56276	1	6334	6334		8.0344	2.3356	1				39258	3043	26142	26154	44665	44665					-0.2361772208664661
NSDFLLLGIFN	11	Unmodified	_NSDFLLLGIFN_					0	0	0		ENSG00000177186|ENST00000317965|OR2M7	ENSG00000177186|ENST00000317965|OR2M7	ENSG00000177186|ENST00000317965|OR2M7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3282470703125	2	626.832246	1251.64994	-0.24236	-0.00015192	-0.37492	-0.00023501	-0.61728	-0.00038693	627.3323368002317	55.239	0.17316	55.266	55.158	55.331	0.027142					5	3	2	0	0	0	0.17301	1	4935	4935		26.063	0	1	28721			39259	7124	26143	26155	44666	44666					0.03417952849008543
NSDIKKDL	8	Unmodified	_NSDIKKDL_					0	0	0		ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2554016113281	2	466.756007	931.497461	-1.2247	-0.00057164	3.4079	0.0015907	2.1832	0.001019	466.75618884254396	65.08	0.64507	65.108	64.55	65.195	0.027145					21	17	2	0	0	0	0.4196	1	6163	6163		14.865	0	1	45196			39260	774	26144	26156	44667	44667					0.028971771722467565
NSDINSNHY	9	Unmodified	_NSDINSNHY_					0	0	0		ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.2260131835938	2	532.225602	1062.43665	0.31908	0.00016982	-0.23477	-0.00012495	0.084316	4.4875E-05	532.2252574780373	27.166	0.67604	27.128	26.839	27.515	-0.038523					33	16	3	0	0	0	0.18601	2	1278	1278;1290		76.774	27.333	1	100620			39261	3978	26145	26157	44668;44669	44668					-0.09206959877997178
NSDINSNHY	9	Unmodified	_NSDINSNHY_					0	0	0		ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.22412109375	2	532.225602	1062.43665	0.84082	0.0004475	-0.8099	-0.00043105	0.030916	1.6454E-05	532.224985825923	27.339	0.63496	27.311	26.967	27.602	-0.027704					40	16	4	0	0	0	0.36616	2	1223	1223;1234		60.118	12.361	1	102490			39262	3978	26145	26157	44670;44671	44670					-0.09206959877997178
NSDINSNHY	9	Unmodified	_NSDINSNHY_					0	0	0		ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	532.225602	1062.43665	0.54901	0.0002922	-0.40799	-0.00021714	0.14103	7.5058E-05	532.2251741191305	26.97	0.56571	27.011	26.738	27.304	0.040834	-0.13907	0.0001511	NaN	76.774	33	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75317			39263	3978	26145	26157							-0.09206959877997178
NSDLQGVNVI	10	Unmodified	_NSDLQGVNVI_					0	0	0		ENSG00000059573|ENST00000371224|ALDH18A1	ENSG00000059573|ENST00000371224|ALDH18A1	ENSG00000059573|ENST00000371224|ALDH18A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2785034179688	2	529.77747	1057.54039	-0.33938	-0.0001798	4.1578	0.0022027	3.8184	0.0020229	529.7795579963132	64.39	0.96629	64.417	63.833	64.799	0.027145					56	25	3	0	0	0	0.8545	1	6109	6109		36.447	2.2742	1	324740			39264	1053	26146	26158	44672	44672					0.013919472296720414
NSDPGLAVGY	10	Unmodified	_NSDPGLAVGY_					0	0	0		nc|ENSG00000105664|P49747-2|COMP;CON__ENSEMBL:ENSBTAP00000006074;ENSG00000105664|ENST00000222271|COMP;ENST00000504720.5_1_5:79374662-79378961:+|nuORF;nc|ENSG00000169231|P49746-2|THBS3;ENSG00000169231|ENST00000368378|THBS3;chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4;ENSG00000113296|ENST00000350881|THBS4	nc|ENSG00000105664|P49747-2|COMP;chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4	chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.7375793457031	2	496.737814	991.461075	-0.073904	-3.6711E-05	-0.04166	-2.0694E-05	-0.11556	-5.7405E-05	496.7375659828047	59.559	0.70983	59.546	59.225	59.935	-0.013733					35	18	3	0	0	0	0.42393	2	5467	5467;5478		62.107	14.45	1	333290		+	39265	561;459	26147	26159	44673;44674	44673					-0.03499699724477523
NSDPGLAVGY	10	Unmodified	_NSDPGLAVGY_					0	0	0		nc|ENSG00000105664|P49747-2|COMP;CON__ENSEMBL:ENSBTAP00000006074;ENSG00000105664|ENST00000222271|COMP;ENST00000504720.5_1_5:79374662-79378961:+|nuORF;nc|ENSG00000169231|P49746-2|THBS3;ENSG00000169231|ENST00000368378|THBS3;chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4;ENSG00000113296|ENST00000350881|THBS4	nc|ENSG00000105664|P49747-2|COMP;chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4	chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.7384033203125	2	496.737814	991.461075	0.18271	9.076E-05	0.0057798	2.871E-06	0.18849	9.3631E-05	496.7375174258732	59.457	0.7662	59.425	59.111	59.877	-0.031727					40	18	3	0	0	0	0.6116	3	5602	5567;5578;5602		49.442	11.63	1	408790		+	39266	561;459	26147	26159	44675;44676;44677	44677					-0.03499699724477523
NSDPGLAVGY	10	Unmodified	_NSDPGLAVGY_					0	0	0		nc|ENSG00000105664|P49747-2|COMP;CON__ENSEMBL:ENSBTAP00000006074;ENSG00000105664|ENST00000222271|COMP;ENST00000504720.5_1_5:79374662-79378961:+|nuORF;nc|ENSG00000169231|P49746-2|THBS3;ENSG00000169231|ENST00000368378|THBS3;chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4;ENSG00000113296|ENST00000350881|THBS4	nc|ENSG00000105664|P49747-2|COMP;chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4	chr5:80036177-80040077|19|13.74|0.31|5.47|+|ENST00000511733|THBS4,THBS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	496.73797607421875	2	496.737814	991.461075	-2.2628	-0.001124	2.3327	0.0011587	0.069866	3.4705E-05	496.73875681685496	59.414	0.74281	59.447	59.09	59.833	0.032822					41	17	3	0	0	0	0.57924	5	5471	5464;5471;5482;5495;5506		51.193	8.7966	1	440220		+	39267	561;459	26147	26159	44678;44679;44680;44681;44682	44679					-0.03499699724477523
NSDQIVKY	8	Unmodified	_NSDQIVKY_					0	0	0			REV__nc|ENSG00000155744|Q8IXS8|HYCC2	REV__nc|ENSG00000155744|Q8IXS8|HYCC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7500915527344	2	483.748182	965.481811	0.13514	6.5374E-05	4.0236	0.0019464	4.1588	0.0020118	483.7499341815547	79.124	0.72253	79.534	79.226	79.949	0.4106					41	16	4	0	0	0	0.87259	1	9053	9053		58.782	8.7574	1	519580	+		39268	20442	26148	26160	44683	44683					-0.0023110934480428114
NSDSELSSQ	9	Unmodified	_NSDSELSSQ_					0	0	0			REV__ENSG00000167306|ENST00000285039|MYO5B	REV__ENSG00000167306|ENST00000285039|MYO5B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.9808044433594	2	483.704168	965.393783	-0.41945	-0.00020289	3.9552	0.0019131	3.5358	0.0017103	483.7059203648196	45.06	0.53416	45.523	45.224	45.758	0.46313					22	12	2	0	0	0	0.20789	1	4142	4142		40.778	32.547	1	229370	+		39269	21375	26149	26161	44684	44684					-0.09029774726081996
NSDSVLLK	8	Unmodified	_NSDSVLLK_					0	0	0			REV__ENSG00000180938|ENST00000319286|ZNF572	REV__ENSG00000180938|ENST00000319286|ZNF572	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2445068359375	2	438.245275	874.475997	-0.44105	-0.00019329	-2.9172	-0.0012785	-3.3583	-0.0014717	438.2439181758842	52.026	0.53198	52.45	52.149	52.681	0.42348					21	12	2	0	0	0	0.38235	1	5193	5193		94.006	3.2298	1	736550	+		39270	22430	26150	26162	44685	44685					0.033737921435204044
NSDSVLLK	8	Unmodified	_NSDSVLLK_					0	0	0			REV__ENSG00000180938|ENST00000319286|ZNF572	REV__ENSG00000180938|ENST00000319286|ZNF572	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	438.245275	874.475997	-0.44105	-0.00019329	-2.9172	-0.0012785	-3.3583	-0.0014717	438.2439181758842	52.026	0.53198	52.45	52.149	52.681	0.42348	0.0063932	0.00044506	NaN	94.006	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	736550	+		39271	22430	26150	26162							0.033737921435204044
NSDTHSSTF	9	Unmodified	_NSDTHSSTF_					0	0	0		ENSG00000111640|ENST00000229239|GAPDH;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;ENST00000466525.1_1_12:6646524-6647333:+|nuORF;nc|ENSG00000111640|P04406-2|GAPDH	ENSG00000111640|ENST00000229239|GAPDH	ENSG00000111640|ENST00000229239|GAPDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.2062683105469	2	498.206878	994.399203	-0.23897	-0.00011905	0.19985	9.9566E-05	-0.039117	-1.9489E-05	498.2068571524564	23.098	0.55172	23.046	22.76	23.311	-0.052114					31	16	2	0	0	0	0.33718	2	782	782;789		62.107	16.155	1	70298			39272	2590	26151	26163	44686;44687	44686					-0.09822051143601129
NSDTHSSTF	9	Unmodified	_NSDTHSSTF_					0	0	0		ENSG00000111640|ENST00000229239|GAPDH;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;ENST00000466525.1_1_12:6646524-6647333:+|nuORF;nc|ENSG00000111640|P04406-2|GAPDH	ENSG00000111640|ENST00000229239|GAPDH	ENSG00000111640|ENST00000229239|GAPDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.2062683105469	2	498.206878	994.399203	-0.73537	-0.00036637	0.78875	0.00039296	0.05338	2.6594E-05	498.20708257500706	23.049	0.6587	22.999	22.716	23.375	-0.050077					41	22	3	0	0	0	0.44421	3	750	728;741;750		54.776	8.8689	1	66923			39273	2590	26151	26163	44688;44689;44690	44690					-0.09822051143601129
NSDTPSPPPG	10	Unmodified	_NSDTPSPPPG_					0	0	0		nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7179870605469	2	484.719621	967.42469	-1.6647	-0.00080692	-1.0387	-0.00050347	-2.7034	-0.0013104	484.718975245025	98.748	4.2341	98.941	95.671	99.905	0.1928					171	98	2	0	0	0	0.8651	1	10179	10179		25.574	1.0549	1	437580			39274	1451	26152	26164	44691	44691					-0.060325766211803966
NSDTPSPPPG	10	Unmodified	_NSDTPSPPPG_					0	0	0		nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.71893310546875	2	484.719621	967.42469	-1.6647	-0.00080693	-1.1726	-0.0005684	-2.8374	-0.0013753	484.71886476647086	100.24	1.3318	100.42	99.843	101.18	0.17199					60	30	3	0	0	0	0.73395	1	10394	10394		42.864	5.7052	1	492530			39275	1451	26152	26164	44692	44692					-0.060325766211803966
NSDVSLLNY	9	Unmodified	_NSDVSLLNY_					0	0	0		nc|ENSG00000163349|Q86Z02-4|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;ENSG00000163349|ENST00000426820|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.750732421875	2	512.750921	1023.48729	-0.052637	-2.699E-05	0.43093	0.00022096	0.37829	0.00019397	512.7509465257842	71.053	0.91591	71.087	70.781	71.697	0.033997					103	43	4	0	0	0	0.026116	5	6717	6705;6709;6717;6724;6732		120.87	59.896	1	589420			39276	5785	26153	26165	44693;44694;44695;44696;44697	44695					-0.023514305530056845
NSDVSLLNY	9	Unmodified	_NSDVSLLNY_					0	0	0		nc|ENSG00000163349|Q86Z02-4|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;ENSG00000163349|ENST00000426820|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.7506103515625	2	512.750921	1023.48729	-0.53592	-0.00027479	0.79951	0.00040995	0.26359	0.00013516	512.7511566341825	70.921	0.72623	70.883	70.594	71.32	-0.038361					84	35	3	0	0	0	0.039957	6	6896	6869;6877;6884;6890;6896;6902		112.41	35.564	1	753960			39277	5785	26153	26165	44698;44699;44700;44701;44702;44703	44702					-0.023514305530056845
NSDVSLLNY	9	Unmodified	_NSDVSLLNY_					0	0	0		nc|ENSG00000163349|Q86Z02-4|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;ENSG00000163349|ENST00000426820|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	nc|ENSG00000163349|Q86Z02-4|HIPK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.7503051757812	2	512.750921	1023.48729	-0.55805	-0.00028614	0.78234	0.00040115	0.22429	0.00011501	512.7511737805738	70.839	0.81957	70.877	70.527	71.346	0.038055					96	44	3	0	0	0	1.5045E-20	4	6776	6770;6776;6781;6789		181.41	90.63	1	649230			39278	5785	26153	26165	44704;44705;44706;44707	44705					-0.023514305530056845
NSEEATDSE	9	Unmodified	_NSEEATDSE_					0	0	0		nc|ENSG00000100065|Q9BWT7-2|CARD10;ENSG00000100065|ENST00000251973|CARD10	nc|ENSG00000100065|Q9BWT7-2|CARD10	nc|ENSG00000100065|Q9BWT7-2|CARD10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.1871337890625	2	491.185808	980.357064	-0.16814	-8.2586E-05	-0.54945	-0.00026988	-0.71758	-0.00035247	491.18544321590446	64.613	1.5883	64.579	63.461	65.049	-0.034256					90	46	2	0	0	0	0.7932	1	6179	6179		25.574	0	1	131650			39279	1792	26154	26166	44708	44708					-0.13390071342644205
NSELLAQLY	9	Unmodified	_NSELLAQLY_					0	0	0		nc|ENSG00000197959|Q9UQ16-2|DNM3;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000197959|Q9UQ16|DNM3;nc|ENSG00000197959|Q9UQ16-4|DNM3	nc|ENSG00000197959|Q9UQ16-2|DNM3	nc|ENSG00000197959|Q9UQ16-2|DNM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.77587890625	2	525.776939	1049.53933	-0.31107	-0.00016355	-0.62568	-0.00032897	-0.93675	-0.00049252	525.7764421050882	60.483	0.82246	61.036	60.502	61.325	0.55323					32	17	2	0	0	0	0.51307	1	6417	6417		51.335	7.2187	1	829740			39280	8217	26155	26167	44709	44709					0.016537328607682866
NSEPPIFHIK	10	Unmodified	_NSEPPIFHIK_					0	0	0			REV__ENSG00000162753|ENST00000367714|SLC9C2	REV__ENSG00000162753|ENST00000367714|SLC9C2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	591.3185424804688	2	591.319306	1180.62406	0.11826	6.9931E-05	0.88304	0.00052216	1.0013	0.00059209	591.3195203707345	66.847	0.7553	66.811	66.494	67.25	-0.035698					74	33	3	0	0	0	0.86587	1	6406	6406		29.17	2.4771	1	235530	+		39281	20845	26156	26168	44710	44710					0.04097103397361934
NSERNLVVAG	10	Unmodified	_NSERNLVVAG_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7824096679688	2	529.783087	1057.55162	0.065511	3.4706E-05	-3.9587	-0.0020972	-3.8932	-0.0020625	529.7807903370734	52.522	1.485	53.136	52.584	54.069	0.61446					111	35	5	0	0	0	0.70553	1	5316	5316		44.377	1.9027	1	6729200			39282	1263	26157	26169	44711	44711					0.025147693238068314
NSFEKVKR	8	Unmodified	_NSFEKVKR_					0	0	0		ENSG00000103540|ENST00000694978|CCP110;nc|ENSG00000103540|O43303|CCP110	ENSG00000103540|ENST00000694978|CCP110	ENSG00000103540|ENST00000694978|CCP110	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.2770690917969	2	504.285266	1006.55598	0.71825	0.0003622	0.70463	0.00035534	1.4229	0.00071754	504.28660559106936	64.095	0.72047	64.649	64.343	65.063	0.55406					23	16	2	0	0	0	0.4196	1	6993	6993		15.642	0	1	106640			39283	2090	26158	26170	44712	44712					0.0529627853737793
NSFEKVKR	8	Unmodified	_NSFEKVKR_					0	0	0		ENSG00000103540|ENST00000694978|CCP110;nc|ENSG00000103540|O43303|CCP110	ENSG00000103540|ENST00000694978|CCP110	ENSG00000103540|ENST00000694978|CCP110	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	504.285266	1006.55598	-0.60678	-0.00030599	1.4343	0.00072329	0.8275	0.0004173	504.2875082707183	64.174	0.55489	64.561	64.308	64.863	0.3868	-0.044108	0.0003686	NaN	15.642	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74123			39284	2090	26158	26170							0.0529627853737793
NSFKGIKY	8	Unmodified	_NSFKGIKY_					0	0	0		ENST00000597145.5_1_19:4683234-4684926:-|nuORF;nc|ENSG00000142002|Q86TI2-4|DPP9;nc|ENSG00000142002|Q86TI2|DPP9;ENSG00000142002|ENST00000262960|DPP9	ENST00000597145.5_1_19:4683234-4684926:-|nuORF	ENST00000597145.5_1_19:4683234-4684926:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.7635498046875	2	478.763635	955.512717	0.65055	0.00031146	-0.94581	-0.00045282	-0.29526	-0.00014136	478.7629847554191	51.393	0.88005	51.828	51.492	52.372	0.43505					47	20	4	0	0	0	0.42407	1	5113	5113		79.451	23.947	1	1431000			39285	14346	26159	26171	44713	44713					0.03318088760090632
NSFKGIKY	8	Unmodified	_NSFKGIKY_					0	0	0		ENST00000597145.5_1_19:4683234-4684926:-|nuORF;nc|ENSG00000142002|Q86TI2-4|DPP9;nc|ENSG00000142002|Q86TI2|DPP9;ENSG00000142002|ENST00000262960|DPP9	ENST00000597145.5_1_19:4683234-4684926:-|nuORF	ENST00000597145.5_1_19:4683234-4684926:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	478.763635	955.512717	-0.019765	-9.4628E-06	-0.19455	-9.3141E-05	-0.21431	-0.0001026	478.76333815385567	51.126	0.7417	51.878	51.614	52.356	0.75174	0.024953	0.00037969	NaN	79.451	42	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1765200			39286	14346	26159	26171							0.03318088760090632
NSFLAVMCK	9	Unmodified	_NSFLAVMCK_					0	0	0			REV__nc|ENSG00000124486|Q93008-3|USP9X	REV__nc|ENSG00000124486|Q93008-3|USP9X	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.7527770996094	2	506.751356	1011.48816	1.4444	0.00073194	1.6633	0.0008429	3.1077	0.0015748	506.75204042720367	98.5	2.1767	98.861	97.949	100.13	0.36137					121	53	5	0	0	0	0.72402	1	11834	11834		38.806	8.3025	1	5114500	+		39287	18587	26160	26172	44714	44714					-0.01712630709289442
NSFLEKKVLAM	11	Unmodified	_NSFLEKKVLAM_					0	0	0		nc|ENSG00000091879|O15123-2|ANGPT2;ENSG00000091879|ENST00000629816|ANGPT2;nc|ENSG00000091879|O15123|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3584594726562	2	640.357573	1278.70059	-0.024279	-1.5547E-05	2.2238	0.001424	2.1995	0.0014085	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.66929	1	10120	10120		36.447	6.129	1	448130			39288	1685	26161	26173	44715	44715					0.07239158902348208
NSFLEKKVLAM	11	Unmodified	_NSFLEKKVLAM_					0	0	0		nc|ENSG00000091879|O15123-2|ANGPT2;ENSG00000091879|ENST00000629816|ANGPT2;nc|ENSG00000091879|O15123|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3579711914062	2	640.357573	1278.70059	2.419	0.001549	-0.44244	-0.00028332	1.9765	0.0012657	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.638	1	10764	10764		40.058	3.6114	1	625580			39289	1685	26161	26173	44716	44716					0.07239158902348208
NSFLEKKVLAM	11	Unmodified	_NSFLEKKVLAM_					0	0	0		nc|ENSG00000091879|O15123-2|ANGPT2;ENSG00000091879|ENST00000629816|ANGPT2;nc|ENSG00000091879|O15123|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.360107421875	2	640.357573	1278.70059	1.5852	0.0010151	0.3139	0.00020101	1.8991	0.0012161	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.55601	1	10385	10385		47.96	5.0953	1	616450			39290	1685	26161	26173	44717	44717					0.07239158902348208
NSFLPTPSSTH	11	Unmodified	_NSFLPTPSSTH_					0	0	0		ENST00000588621.5_1_19:45767955-45791108:+|nuORF	ENST00000588621.5_1_19:45767955-45791108:+|nuORF	ENST00000588621.5_1_19:45767955-45791108:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.2861328125	2	594.288202	1186.56185	-1.0012	-0.00059502	-2.2119	-0.0013145	-3.2131	-0.0019095	594.2868113161653	29.952	0.6129	29.981	29.705	30.318	0.028618					31	13	3	0	0	0	0.65746	1	1918	1918		37.812	3.8899	1	586170			39291	14216	26162	26174	44718	44718					-0.023966677416410676
NSFNYHSFLT	10	Unmodified	_NSFNYHSFLT_					0	0	0		nc|ENSG00000196387|P52738-2|ZNF140;ENSG00000196387|ENST00000355557|ZNF140	nc|ENSG00000196387|P52738-2|ZNF140	nc|ENSG00000196387|P52738-2|ZNF140	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	410.52471923828125	3	410.524372	1228.55129	1.8104	0.00074321	1.4272	0.0005859	3.2376	0.0013291	410.52482898990854	56.428	1.4903	56.462	56.211	57.702	0.033184					119	59	3	0	0	0	0.91289	1	5092	5092		4.3388	0	1	2664700			39292	8049	26163	26175	44719	44719					-0.053846503960585324
NSGGGGCG	8	Unmodified	_NSGGGGCG_					0	0	0		ENSG00000130224|ENST00000317135|LRCH2;nc|ENSG00000130224|Q5VUJ6-2|LRCH2;AluSp_dup11449|chr4:15667776-15668057:+|2.6392998641273766|0.46236865931507|2.51|63.0|11|3|sense	ENSG00000130224|ENST00000317135|LRCH2	ENSG00000130224|ENST00000317135|LRCH2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	607.3471069335938	1	608.2093	607.202024	-1.2192	-0.00074155	-3.0266	-0.0018408	-4.2458	-0.0025823	608.2100040861139	29.876	1.7049	29.876	28.874	30.578	0					91	67	2	0	0	0	0.4196	1	1346	1346		1.3276	0	1	31908			39293	3625	26164	26176	44720	44720					-0.11728929167395563
NSGINGEPI	9	Unmodified	_NSGINGEPI_					0	0	0			REV__nc|ENSG00000057149|P29508-2|SERPINB3	REV__nc|ENSG00000057149|P29508-2|SERPINB3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7230224609375	2	450.724707	899.43486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.619	1	70.649	70.149	71.149	0.030495								0	0	0	0.37744	1	6676	6676		51.335	3.4199	1		+		39294	16424	26165	26177	44721	44721					-0.01887968895960057
NSGKQPIKQKS	11	Unmodified	_NSGKQPIKQKS_					0	0	0			REV__nc|ENSG00000157827|Q96PY5|FMNL2	REV__nc|ENSG00000157827|Q96PY5|FMNL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.56524658203125	3	405.566571	1213.67788	-0.19603	-7.9504E-05	-4.3601	-0.0017683	-4.5562	-0.0018478	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.74002	1	6032	6032		24.276	4.2455	1	328790	+		39295	20566	26166	26178	44722	44722					0.07959275829102808
NSGLIGSTG	9	Unmodified	_NSGLIGSTG_					0	0	0		ENST00000473682.5_1_1:111740397-111743081:-|nuORF	ENST00000473682.5_1_1:111740397-111743081:-|nuORF	ENST00000473682.5_1_1:111740397-111743081:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.20904541015625	2	403.20615	804.397747	2.9266	0.00118	4.1333	0.0016666	7.0599	0.0028466	403.2077473802554	85.716	2.0213	85.774	85.282	87.304	0.057899					111	46	4	0	0	0	0.64555	1	8737	8737		44.377	5.1244	1	1450600			39296	12289	26167	26179	44723	44723					-0.012276404416866171
NSGLKQKVLD	10	Unmodified	_NSGLKQKVLD_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.7770385742188	2	551.316763	1100.61897	-0.3714	-0.00020476	-0.2475	-0.00013645	-0.61891	-0.00034121	551.8175772353904	54.721	0.2095	55.289	55.153	55.362	0.56836					5	4	2	0	0	0	0.37624	1	5583	5583		28.081	1.0342	1	34524			39297	4393	26168	26180	44724	44724					0.07268799534745085
NSGTHNAH	8	Unmodified	_NSGTHNAH_					0	0	0			REV__ENSG00000174106|ENST00000308330|LEMD3	REV__ENSG00000174106|ENST00000308330|LEMD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1837158203125	2	419.18354	836.352528	0.63595	0.00026658	-0.682	-0.00028588	-0.046049	-1.9303E-05	419.18328969471196	86.477	1.2293	86.92	86.409	87.638	0.44331					73	29	4	0	0	0	0.86677	1	10136	10136		27.882	0	1	2405500	+		39298	21973	26169	26181	44725	44725					-0.07219446184228673
NSGTTNDRL	9	Unmodified	_NSGTTNDRL_					0	0	0			REV__nc|ENSG00000100354|Q9UPQ9-2|TNRC6B	REV__nc|ENSG00000100354|Q9UPQ9-2|TNRC6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.2367858886719	2	489.23597	976.457387	0.45266	0.00022146	0.44936	0.00021984	0.90202	0.0004413	489.23621768021786	62.918	2.6052	63.04	62.714	65.319	0.12252					281	107	5	0	0	0	0.7932	1	5607	5607		26.693	0	1	3811100	+		39299	17179	26170	26182	44726	44726					-0.031783694983232635
NSHHTWLY	8	Unmodified	_NSHHTWLY_					0	0	0		ENST00000484115.5_1_3:49041517-49041694:+|nuORF;nc|ENSG00000178467|Q9NXG6-2|P4HTM;ENSG00000178467|ENST00000383729|P4HTM;ENST00000472301.5_1_3:49027419-49042675:+|nuORF;nc|ENSG00000178467|Q9NXG6-3|P4HTM	ENST00000484115.5_1_3:49041517-49041694:+|nuORF	ENST00000484115.5_1_3:49041517-49041694:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.2471923828125	2	529.246141	1056.47773	0.70061	0.0003708	1.0746	0.00056871	1.7752	0.00093951	529.2466358220217	60.143	0.9499	60.111	59.489	60.439	-0.031731					45	24	2	0	0	0	0.93786	1	5662	5662		53.351	2.016	1	189030			39300	7209	26171	26183	44727	44727					-0.04825154047853175
NSHLVSFLSF	10	Unmodified	_NSHLVSFLSF_					0	0	0			REV__ENST00000461981.5_1_2:201718031-201721754:-|nuORF	REV__ENST00000461981.5_1_2:201718031-201721754:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3696899414062	2	575.798206	1149.58186	0.52093	0.00029995	-2.0804	-0.0011979	-1.5595	-0.00089797	575.795602024407	44.776	0.17583	44.788	44.679	44.855	0.012058					5	3	2	0	0	0	0.37624	1	3178	3178		12.812	1.3007	1	15780	+		39301	27040	26172	26184	44728	44728					0.013051279889850775
NSHLVSFLSF	10	Unmodified	_NSHLVSFLSF_					0	0	0			REV__ENST00000461981.5_1_2:201718031-201721754:-|nuORF	REV__ENST00000461981.5_1_2:201718031-201721754:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	575.798206	1149.58186	-0.72971	-0.00042017	-0.22913	-0.00013193	-0.95884	-0.0005521	575.7981321912205	44.741	0.43968	44.708	44.487	44.927	-0.03347	-0.041413	0.00065776	NaN	24.519	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56948	+		39302	27040	26172	26184							0.013051279889850775
NSIGTPLDPKY	11	Unmodified	_NSIGTPLDPKY_					0	0	0		chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35;ENSG00000118965|ENST00000281405|WDR35;nc|ENSG00000118965|Q9P2L0|WDR35	chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.21356201171875	3	402.211794	1203.61355	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.333	1	74.378	73.878	74.878	0.04509								0	0	0	0.56276	1	7190	7190		34.087	7.3368	1				39303	323	26173	26185	44729	44729					0.01989075952269559
NSILLLLP	8	Unmodified	_NSILLLLP_					0	0	0			REV__ENST00000271843.8_1_1:153946752-153946992:-|nuORF	REV__ENST00000271843.8_1_1:153946752-153946992:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7879638671875	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.86791	1	3017	3017		28.254	2.8041	1	11085000	+		39304	24536	26174	26186	44730	44730					0.11308733942325944
NSILLLLP	8	Unmodified	_NSILLLLP_					0	0	0			REV__ENST00000271843.8_1_1:153946752-153946992:-|nuORF	REV__ENST00000271843.8_1_1:153946752-153946992:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7877502441406	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.79929	1	3600	3600		18.324	0	1	539980	+		39305	24536	26174	26186	44731	44731					0.11308733942325944
NSILLSKNRGN	11	Unmodified	_NSILLSKNRGN_					0	0	0			REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.9013366699219	3	405.898321	1214.67313	-0.38703	-0.00015709	3.9527	0.0016044	3.5656	0.0014473	405.89983412596115	21.954	0.58343	21.895	21.71	22.293	-0.058668					24	20	2	0	0	0	0.73277	1	692	692		25.892	1.6599	1	26802	+		39306	29469	26175	26187	44732	44732					0.0743839168633258
NSIQSPGP	8	Unmodified	_NSIQSPGP_					0	0	0			REV__nc|ENSG00000118058|Q03164-2|KMT2A	REV__nc|ENSG00000118058|Q03164-2|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2008972167969	2	400.200867	798.387182	-1.8507	-0.00074064	-0.79596	-0.00031855	-2.6466	-0.0010592	400.2020327655788	68.039	1.0961	68.174	67.814	68.91	0.13522					55	41	2	0	0	0	0.89494	1	6131	6131		37.159	1.5408	1	183560	+		39307	18291	26176	26188	44733	44733					-0.020076230961308283
NSIQVTPSLV	10	Unmodified	_NSIQVTPSLV_					0	0	0			REV__ENSG00000017797|ENST00000383432|RALBP1	REV__ENSG00000017797|ENST00000383432|RALBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.29931640625	2	529.298039	1056.58152	0.13219	6.9967E-05	3.9298	0.00208	4.062	0.00215	529.2996849049168	58.481	1.0948	59.034	58.597	59.692	0.55323					63	26	4	0	0	0	0.76096	1	6131	6131		41.427	7.2541	1	1371900	+		39308	16221	26177	26189	44734	44734					0.055497082691545074
NSIRNYFQP	9	Unmodified	_NSIRNYFQP_					0	0	0		ENSG00000104320|ENST00000265433|NBN	ENSG00000104320|ENST00000265433|NBN	ENSG00000104320|ENST00000265433|NBN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8104858398438	2	569.78563	1137.55671	0.67976	0.00038732	-0.42705	-0.00024333	0.25271	0.00014399	569.7851331056228	79.6	0.46553	79.739	79.494	79.959	0.13902					34	19	2	0	0	0	0.20789	1	7561	7561		21.96	4.4919	1	69502			39309	2124	26178	26190	44735	44735					-0.0065692681357631955
NSIRNYFQP	9	Unmodified	_NSIRNYFQP_					0	0	0		ENSG00000104320|ENST00000265433|NBN	ENSG00000104320|ENST00000265433|NBN	ENSG00000104320|ENST00000265433|NBN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	569.78563	1137.55671	0.31172	0.00017761	-0.80113	-0.00045647	-0.48941	-0.00027886	569.7854506117277	79.927	0.58218	79.871	79.4	79.983	-0.056503	0.031163	-0.00036413	NaN	21.96	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102160			39310	2124	26178	26190							-0.0065692681357631955
NSIRNYFQP	9	Unmodified	_NSIRNYFQP_					0	0	0		ENSG00000104320|ENST00000265433|NBN	ENSG00000104320|ENST00000265433|NBN	ENSG00000104320|ENST00000265433|NBN	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	569.78563	1137.55671	0.90133	0.00051357	-1.3355	-0.00076093	-0.43412	-0.00024736	570.2861079064445	79.642	0.50963	79.695	79.471	79.981	0.053848	-0.14407	-0.00097303	NaN	21.96	36	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102630			39311	2124	26178	26190							-0.0065692681357631955
NSIRNYFQP	9	Unmodified	_NSIRNYFQP_					0	0	0		ENSG00000104320|ENST00000265433|NBN	ENSG00000104320|ENST00000265433|NBN	ENSG00000104320|ENST00000265433|NBN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	569.78563	1137.55671	0.64346	0.00036664	-3.3936	-0.0019336	-2.7501	-0.001567	569.7835396771688	79.599	0.17086	80.149	80.042	80.213	0.54945	0.30941	-0.0033184	NaN	21.96	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56205			39312	2124	26178	26190							-0.0065692681357631955
NSIVMRFFNA	10	Unmodified	_NSIVMRFFNA_					0	0	0			REV__ENST00000488724.5_1_2:171705783-171716389:+|nuORF	REV__ENST00000488724.5_1_2:171705783-171716389:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2073974609375	3	400.206098	1197.59646	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.767	1	69.839	69.339	70.339	0.071037								0	0	0	0.45132	1	6303	6303		28.577	0	1		+		39313	18788	26179	26191	44736	44736					0.005568768655166423
NSKELTMVEK	10	Unmodified	_NSKELTMVEK_					0	0	0		ENSG00000203668|ENST00000366553|CHML	ENSG00000203668|ENST00000366553|CHML	ENSG00000203668|ENST00000366553|CHML	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.2949829101562	2	589.807913	1177.60127	-0.030178	-1.7799E-05	-2.6918	-0.0015876	-2.7219	-0.0016054	589.8063071743508	75.751	1.1536	76.319	75.946	77.1	0.56835					49	29	4	0	0	0	0.37624	1	8660	8660		27.047	7.9438	1	1685400			39314	8388	26180	26192	44737	44737					0.019577162175664853
NSKESKFD	8	Unmodified	_NSKESKFD_					0	0	0			REV__nc|ENSG00000171634|Q12830-4|BPTF	REV__nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.72894287109375	2	477.729989	953.445425	-1.6875	-0.00080617	-1.149	-0.0005489	-2.8365	-0.0013551	477.72927840585464	97.94	1.0527	98.136	97.721	98.773	0.19585					50	23	3	0	0	0	0.8537	1	10109	10109		25.574	0	1	460730	+		39315	21757	26181	26193	44738	44738					-0.03315986241511837
NSKFANKKS	9	Unmodified	_NSKFANKKS_					0	0	0			REV__ENST00000461310.5_1_10:70091580-70098360:+|nuORF	REV__ENST00000461310.5_1_10:70091580-70098360:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.2817993164062	2	512.282723	1022.55089	0.68771	0.0003523	-3.3979	-0.0017407	-2.7102	-0.0013884	512.280910573943	86.397	3.3825	86.546	85.297	88.68	0.14902					148	79	2	0	0	0	0.71772	1	8549	8549		39.253	0.44669	1	371240	+		39316	27025	26182	26194	44739	44739					0.0405197467475773
NSKIIVVTIRP	11	Unmodified	_NSKIIVVTIRP_					0	0	0		ENSG00000135298|ENST00000370598|ADGRB3	ENSG00000135298|ENST00000370598|ADGRB3	ENSG00000135298|ENST00000370598|ADGRB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.93255615234375	3	413.930962	1238.77106	0.21387	8.8526E-05	4.0224	0.001665	4.2363	0.0017535	413.93255960283653	42.979	1.989	43.044	42.116	44.105	0.065033					113	52	3	0	0	0	0.75779	1	2965	2965		20.315	0.28454	1	432840			39317	4001	26183	26195	44740	44740					0.161222002823024
NSKKLDKLA	9	Unmodified	_NSKKLDKLA_					0	0	0			REV__ENSG00000118492|ENST00000397944|ADGB	REV__ENSG00000118492|ENST00000397944|ADGB	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.8077697753906	2	508.808574	1015.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.703	1	83.762	83.262	84.262	0.05925								0	0	0	0.31117	1	8425	8425		26.693	0	1		+		39318	18316	26184	26196	44741	44741					0.09541718368654983
NSKKRQDL	8	Unmodified	_NSKKRQDL_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7803039550781	2	494.780348	987.546142	-0.85772	-0.00042438	0.93735	0.00046378	0.07963	3.9399E-05	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.86677	1	8769	8769		27.882	1.0861	1	737700			39319	7038	26185	26197	44742	44742					0.051870905319901794
NSKLEAAVAQ	10	Unmodified	_NSKLEAAVAQ_					0	0	0		nc|ENSG00000290966|A6NCN2|KRT87P;ENSG00000170442|ENST00000423955|KRT86;CON__O43790;ENSG00000170523|ENST00000293670|KRT83;CON__Q6NT21;CON__P78385;ENSG00000205426|ENST00000327741|KRT81;CON__Q14533	nc|ENSG00000290966|A6NCN2|KRT87P	nc|ENSG00000290966|A6NCN2|KRT87P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.7803344726562	2	515.780013	1029.54547	0.049472	2.5516E-05	0.26703	0.00013773	0.3165	0.00016325	515.7799810559526	31.551	0.49365	31.544	31.271	31.764	-0.0061455					16	11	2	0	0	0	0.86272	1	1737	1737		24.519	0.99649	1	37196		+	39320	573	26186	26198	44743	44743					0.03188251092274186
NSKNRLRVF	9	Unmodified	_NSKNRLRVF_					0	0	0			REV__ENST00000368298.2_1_1:156104977-156106341:+|nuORF	REV__ENST00000368298.2_1_1:156104977-156106341:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3305053710938	2	567.330539	1132.64652	-0.50942	-0.00028901	0.5149	0.00029212	0.0054817	3.1099E-06	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.67345	1	10601	10601		42.396	7.2441	1	5685000	+		39321	20740	26187	26199	44744	44744					0.08550747585650242
NSKPSHIR	8	Unmodified	_NSKPSHIR_					0	0	0			REV__ENST00000452357.6_1_12:113355638-113355737:+|nuORF	REV__ENST00000452357.6_1_12:113355638-113355737:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.7615051269531	2	469.761958	937.509363	0.13992	6.5729E-05	-1.2577	-0.0005908	-1.1177	-0.00052507	469.7613068625106	35.735	1.6772	35.674	35.283	36.96	-0.060337					67	47	2	0	0	0	0.87479	1	1906	1906		30.504	1.3541	1	144740	+		39322	26894	26188	26200	44745	44745					0.03810838706078812
NSKQFWKRSA	10	Unmodified	_NSKQFWKRSA_					0	0	0		ENSG00000065491|ENST00000373491|TBC1D22B	ENSG00000065491|ENST00000373491|TBC1D22B	ENSG00000065491|ENST00000373491|TBC1D22B	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3790893554688	2	626.333279	1250.652	-0.053528	-3.3526E-05	4.0494	0.0025363	3.9959	0.0025027	626.3336896989556	106.52	0.35664	106.52	106.35	106.71	0					12	7	2	0	0	0	0.37624	1	11047	11047		17.468	0	1	38385			39323	1130	26189	26201	44746	44746					0.036704263774709034
NSKRCAFPYTI	11	Unmodified	_NSKRCAFPYTI_					0	0	0			REV__nc|ENSG00000104447|Q9UHF7|TRPS1	REV__nc|ENSG00000104447|Q9UHF7|TRPS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77899169921875	3	433.888657	1298.64414	0.24106	0.00010459	-2.4196	-0.0010498	-2.1786	-0.00094525	433.888258222869	45.957	0.16925	45.999	45.927	46.096	0.042599					5	4	2	0	0	0	0.17302	1	3338	3338		21.032	3.8655	1	25932	+		39324	17458	26190	26202	44747	44747					0.006765310656646761
NSLENCGA	8	Unmodified	_NSLENCGA_					0	0	0		nc|ENSG00000179709|Q86W28-2|NLRP8;ENSG00000179709|ENST00000291971|NLRP8	nc|ENSG00000179709|Q86W28-2|NLRP8	nc|ENSG00000179709|Q86W28-2|NLRP8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.1703186035156	2	404.16871	806.322867	0.028783	1.1633E-05	2.5917	0.0010475	2.6205	0.0010591	404.17015585403414	78.633	4.5965	78.579	78.135	82.731	-0.053558					226	127	5	0	0	0	0.87479	1	7887	7887		30.504	3.7075	1	6964800			39325	7289	26191	26203	44748	44748					-0.08804146244585809
NSLFIFIAKR	10	Unmodified	_NSLFIFIAKR_					0	0	0			REV__ENSG00000136816|ENST00000259339|TOR1B	REV__ENSG00000136816|ENST00000259339|TOR1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5751037597656	3	403.576519	1207.70773	-1.8238	-0.00073605	-2.6172	-0.0010562	-4.441	-0.0017923	403.575388315242	82.768	3.2423	82.923	82.261	85.503	0.15474					165	75	3	0	0	0	0.85834	2	8109	8097;8109		21.78	0	1	1511600	+		39326	19336	26192	26204	44749;44750	44750					0.11218259565066546
NSLHKAPL	8	Unmodified	_NSLHKAPL_					0	0	0		ENST00000515415.5_1_5:57755119-57755311:-|nuORF	ENST00000515415.5_1_5:57755119-57755311:-|nuORF	ENST00000515415.5_1_5:57755119-57755311:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2552185058594	2	440.255977	878.497401	0.25826	0.0001137	-1.4885	-0.00065531	-1.2302	-0.00054161	440.2551628141125	62.575	1.3839	63.129	62.257	63.641	0.5545					72	31	3	0	0	0	0.884	1	6737	6737		33.516	1.5607	1	690880			39327	13084	26193	26205	44751	44751					0.05329221962904285
NSLKKLAAL	9	Unmodified	_NSLKKLAAL_					0	0	0		ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3068542480469	2	479.30821	956.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.673	1	57.707	57.207	58.207	0.033905								0	0	0	0.31437	1	5258	5258		25.574	0	1				39328	6633	26194	26206	44752	44752					0.12182923719615246
NSLKKLAAL	9	Unmodified	_NSLKKLAAL_					0	0	0		ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3090515136719	2	479.30821	956.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.29	1	47.328	46.828	47.828	0.037731								0	0	0	0.29273	1	3531	3531		40.778	14.085	1				39329	6633	26194	26206	44753	44753					0.12182923719615246
NSLKSEIR	8	Unmodified	_NSLKSEIR_					0	0	0		ENST00000525971.6_1_12:85431954-85518298:+|nuORF;nc|ENSG00000133640|Q96JM4-2|LRRIQ1;ENSG00000133640|ENST00000393217|LRRIQ1	ENST00000525971.6_1_12:85431954-85518298:+|nuORF	ENST00000525971.6_1_12:85431954-85518298:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.76953125	2	473.769448	945.524344	-0.53381	-0.0002529	0.2553	0.00012095	-0.27851	-0.00013195	473.76958016102765	28.574	0.70219	28.555	28.215	28.917	-0.019407					32	17	3	0	0	0	0.88185	1	1383	1383		32.812	4.5581	1	82680			39330	3886	26195	26207	44754	44754					0.04940285783436593
NSLKWILEN	9	Unmodified	_NSLKWILEN_					0	0	0		nc|ENSG00000049759|Q96PU5-9|NEDD4L;nc|ENSG00000049759|Q96PU5-4|NEDD4L;nc|ENSG00000049759|Q96PU5-2|NEDD4L;nc|ENSG00000049759|Q96PU5-6|NEDD4L;nc|ENSG00000049759|Q96PU5-5|NEDD4L;nc|ENSG00000049759|Q96PU5-7|NEDD4L;ENSG00000049759|ENST00000400345|NEDD4L;nc|ENSG00000049759|Q96PU5-3|NEDD4L	nc|ENSG00000049759|Q96PU5-9|NEDD4L	nc|ENSG00000049759|Q96PU5-9|NEDD4L	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.8055419921875	2	558.806031	1115.59751	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.121	1	31.074	30.574	31.574	-0.047064								0	0	0	0.29796	1	1740	1740		31.53	0	1				39331	988	26196	26208	44755	44755					0.04433414506047484
NSLLAKMTRGT	11	Unmodified	_NSLLAKMTRGT_					0	0	0			REV__ENSG00000099256|ENST00000320152|PRTFDC1	REV__ENSG00000099256|ENST00000320152|PRTFDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.3323364257812	2	596.329347	1190.64414	2.639	0.0015737	3.1862	0.0019	5.8251	0.0034737	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.638	1	10284	10284		40.058	4.9061	1	1305600	+		39332	17085	26197	26209	44756	44756					0.05644531065672709
NSLLGLCFRES	11	Unmodified	_NSLLGLCFRES_					0	0	0			REV__nc|ENSG00000166949|P84022-4|SMAD3	REV__nc|ENSG00000166949|P84022-4|SMAD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.5451354980469	3	413.544779	1237.61251	2.131	0.00088125	-1.1009	-0.00045526	1.0301	0.00042599	413.5442532017817	54.081	1.1283	54.104	53.513	54.641	0.022541					93	34	4	0	0	0	0.61907	1	4781	4781		42.243	0.81596	1	939580	+		39333	21343	26198	26210	44757	44757					0.0032053831173470826
NSLLKMICQQ	10	Unmodified	_NSLLKMICQQ_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3049926757812	2	589.307026	1176.5995	-0.33078	-0.00019493	1.4058	0.00082846	1.075	0.00063353	589.3075589368876	44.062	0.53366	44.035	43.726	44.259	-0.026764					21	12	2	0	0	0	0.73395	1	3388	3388		42.864	0.38981	1	137100			39334	5220	26199	26211	44758	44758					0.018263839279825334
NSLLLHLLKSQ	11	Unmodified	_NSLLLHLLKSQ_					0	0	0		ENSG00000180530|ENST00000318948|NRIP1	ENSG00000180530|ENST00000318948|NRIP1	ENSG00000180530|ENST00000318948|NRIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.59088134765625	3	422.590717	1264.75032	1.507	0.00063683	2.8643	0.0012104	4.3713	0.0018473	422.5918242191152	56.954	1.5389	56.988	56.634	58.173	0.033184					128	49	3	0	0	0	0.70847	1	5257	5257		30.139	4.2474	1	319500			39335	7332	26200	26212	44759	44759					0.12853609902640528
NSLLLHLLKSQ	11	Unmodified	_NSLLLHLLKSQ_					0	0	0		ENSG00000180530|ENST00000318948|NRIP1	ENSG00000180530|ENST00000318948|NRIP1	ENSG00000180530|ENST00000318948|NRIP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.224853515625	3	422.590717	1264.75032	1.2472	0.00052705	3.0305	0.0012806	4.2777	0.0018077	422.59188005199206	62.014	0.53091	62.043	61.792	62.323	0.029575					28	20	2	0	0	0	0.17331	1	5817	5817		30.139	0.58839	1	96898			39336	7332	26200	26212	44760	44760					0.12853609902640528
NSLLLHLLKSQ	11	Unmodified	_NSLLLHLLKSQ_					0	0	0		ENSG00000180530|ENST00000318948|NRIP1	ENSG00000180530|ENST00000318948|NRIP1	ENSG00000180530|ENST00000318948|NRIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5928649902344	3	422.590717	1264.75032	0.30451	0.00012868	4.046	0.0017098	4.3505	0.0018385	422.59238731666846	53.239	1.2809	53.31	52.523	53.804	0.070713					81	35	3	0	0	0	0.73277	1	4318	4318		25.892	2.5138	1	160480			39337	7332	26200	26212	44761	44761					0.12853609902640528
NSLLLHLLKSQ	11	Unmodified	_NSLLLHLLKSQ_					0	0	0		ENSG00000180530|ENST00000318948|NRIP1	ENSG00000180530|ENST00000318948|NRIP1	ENSG00000180530|ENST00000318948|NRIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.591796875	3	422.590717	1264.75032	0.34868	0.00014735	4.1113	0.0017374	4.4599	0.0018847	422.5923689571847	58.01	1.1959	58.12	57.495	58.691	0.11027					112	57	3	0	0	0	0.75457	1	4940	4940		21.032	1.7696	1	286690			39338	7332	26200	26212	44762	44762					0.12853609902640528
NSLLLLPV	8	Unmodified	_NSLLLLPV_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.780029296875	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.85277	1	2324	2324		25.45	0	1	2486400			39339	2096	26201	26213	44763	44763					0.10388447425282266
NSLLMLVFW	9	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))NSLLM(Oxidation (M))LVFW_		NSLLM(1)LVFW		NSLLM(61)LVFW	1	0	1			REV__ENST00000262662.5_1_1:51440237-51440288:+|nuORF	REV__ENST00000262662.5_1_1:51440237-51440288:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8037719726562	2	590.807185	1179.59982	-2.3707	-0.0014006	-3.7224	-0.0021992	-6.0931	-0.0035998	590.8048142478464	63.97	0.98344	63.997	63.65	64.634	0.027138					67	27	4	0	0	0	0.35373	1	6039	6039		60.972	6.2496	1	805220	+		39340	24430	26202	26214	44764	44764		381			0.017201269195084024
NSLLPILV	8	Unmodified	_NSLLPILV_					0	0	0		nc|ENSG00000235931|A4QN01|LINC01553	nc|ENSG00000235931|A4QN01|LINC01553	nc|ENSG00000235931|A4QN01|LINC01553	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7802734375	2	434.778754	867.542954	0.12026	5.2288E-05	3.2796	0.0014259	3.3998	0.0014782	434.78004408406343	33.259	0.88562	33.227	32.891	33.776	-0.032677					85	40	3	0	0	0	0.81724	1	1626	1626		14.664	0	1	316820			39341	15275	26203	26215	44765	44765					0.10388447425305003
NSLPPPAH	8	Unmodified	_NSLPPPAH_					0	0	0		ENST00000203630.9_2_12:6857197-6857296:-|nuORF	ENST00000203630.9_2_12:6857197-6857296:-|nuORF	ENST00000203630.9_2_12:6857197-6857296:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.228271484375	2	416.719227	831.423902	0.76919	0.00032054	0.37762	0.00015736	1.1468	0.0004779	416.7193587750137	49.868	0.53899	50.316	50.102	50.641	0.44761					16	12	2	0	0	0	0.4196	1	4920	4920		13.775	0	1	156280			39342	9098	26204	26216	44766	44766					0.0014467352042402126
NSLPTFPTD	9	Unmodified	_NSLPTFPTD_					0	0	0		nc|ENSG00000005339|Q92793-2|CREBBP;ENSG00000005339|ENST00000262367|CREBBP	nc|ENSG00000005339|Q92793-2|CREBBP	nc|ENSG00000005339|Q92793-2|CREBBP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.23834228515625	2	496.24019	990.465826	-1.7892	-0.00088786	-2.3233	-0.0011529	-4.1125	-0.0020408	496.2388858051541	30.95	0.59715	30.95	30.699	31.296	0					45	19	3	0	0	0	0.58668	1	1434	1434		47.657	6.8792	1	171020			39343	681	26205	26217	44767	44767					-0.029788155817072948
NSLQDQLSM	9	Oxidation (M)	_NSLQDQLSM(Oxidation (M))_		NSLQDQLSM(1)		NSLQDQLSM(59)	0	0	1		ENST00000552994.5_1_12:72021690-72022730:-|nuORF	ENST00000552994.5_1_12:72021690-72022730:-|nuORF	ENST00000552994.5_1_12:72021690-72022730:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2412719726562	2	526.239864	1050.46517	0.18829	9.9087E-05	3.236	0.0017029	3.4243	0.001802	526.2412314877313	74.357	2.6099	74.748	74.081	76.691	0.3911					105	62	3	0	0	0	0.38563	2	8389	8389;8400		58.782	7.4465	1	679770			39344	13691	26206	26218	44768;44769	44768		201			-0.05803978293079126
NSLQKRQA	8	Unmodified	_NSLQKRQA_					0	0	0		ENSG00000070019|ENST00000261170|GUCY2C	ENSG00000070019|ENST00000261170|GUCY2C	ENSG00000070019|ENST00000261170|GUCY2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7675476074219	2	472.76724	943.519927	0.62555	0.00029574	-0.6042	-0.00028565	0.02135	1.0094E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.87479	1	7970	7970		30.504	1.3541	1	508030			39345	1230	26207	26219	44770	44770					0.04590821360523023
NSLRKAHLL	9	Unmodified	_NSLRKAHLL_					0	0	0		ENSG00000149054|ENST00000278319|ZNF215;nc|ENSG00000149054|Q9UL58-2|ZNF215;ENST00000532533.1_1_11:6964427-6977428:+|nuORF	ENSG00000149054|ENST00000278319|ZNF215	ENSG00000149054|ENST00000278319|ZNF215	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	527.310546875	2	526.322183	1050.62981	-0.14463	-7.6122E-05	4.4678	0.0023515	4.3231	0.0022754	526.3242768056062	81.411	1.0218	81.556	80.973	81.994	0.14513					32	23	2	0	0	0	0.20789	1	7836	7836		18.324	0.95945	1	46471			39346	4994	26208	26220	44771	44771					0.10652246699692114
NSLRVILQA	9	Unmodified	_NSLRVILQA_					0	0	0		ENST00000478923.1_1_X:15768116-15768332:+|nuORF;ENST00000380313.1_1_X:15768116-15781019:+|nuORF;ENST00000380319.2_1_X:15768116-15782978:+|nuORF;ENSG00000169239|ENST00000318636|CA5B	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.8081970214844	2	507.308741	1012.60293	-0.68745	-0.00034875	1.3058	0.00066245	0.61836	0.0003137	507.3092826907936	102.57	0.66698	102.57	102.25	102.91	0					25	16	2	0	0	0	0.7932	1	10470	10470		21.96	4.5949	1	89192			39347	6478	26209	26221	44772	44772					0.09713138088534379
NSLRVILQA	9	Unmodified	_NSLRVILQA_					0	0	0		ENST00000478923.1_1_X:15768116-15768332:+|nuORF;ENST00000380313.1_1_X:15768116-15781019:+|nuORF;ENST00000380319.2_1_X:15768116-15782978:+|nuORF;ENSG00000169239|ENST00000318636|CA5B	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	507.308741	1012.60293	-0.055673	-2.8243E-05	0.5008	0.00025406	0.44513	0.00022582	507.3091142221737	102.36	0.73036	102.38	102.2	102.93	0.019882	0.020012	0.00032389	NaN	21.96	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	117950			39348	6478	26209	26221							0.09713138088534379
NSLRVILQA	9	Unmodified	_NSLRVILQA_					0	0	0		ENST00000478923.1_1_X:15768116-15768332:+|nuORF;ENST00000380313.1_1_X:15768116-15781019:+|nuORF;ENST00000380319.2_1_X:15768116-15782978:+|nuORF;ENSG00000169239|ENST00000318636|CA5B	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	507.308741	1012.60293	2.9587	0.001501	-2.8055	-0.0014233	0.15321	7.7726E-05	507.30735611612386	102.38	0.85928	102.33	102.01	102.87	-0.047005	-0.032107	-0.0030308	NaN	21.96	28	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100360			39349	6478	26209	26221							0.09713138088534379
NSLRVILQA	9	Unmodified	_NSLRVILQA_					0	0	0		ENST00000478923.1_1_X:15768116-15768332:+|nuORF;ENST00000380313.1_1_X:15768116-15781019:+|nuORF;ENST00000380319.2_1_X:15768116-15782978:+|nuORF;ENSG00000169239|ENST00000318636|CA5B	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	507.308741	1012.60293	-0.38745	-0.00019656	0.6084	0.00030865	0.22096	0.00011209	507.30896363236576	102.06	0.96434	102.25	101.93	102.89	0.19483	-0.1123	0.00043306	NaN	21.96	53	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161660			39350	6478	26209	26221							0.09713138088534379
NSLRVILQA	9	Unmodified	_NSLRVILQA_					0	0	0		ENST00000478923.1_1_X:15768116-15768332:+|nuORF;ENST00000380313.1_1_X:15768116-15781019:+|nuORF;ENST00000380319.2_1_X:15768116-15782978:+|nuORF;ENSG00000169239|ENST00000318636|CA5B	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	507.308741	1012.60293	0.81008	0.00041096	-0.39508	-0.00020043	0.415	0.00021053	507.3084910326095	102.19	1.3926	102.32	101.59	102.98	0.13523	-0.042221	-0.00058509	NaN	21.96	64	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	229530			39351	6478	26209	26221							0.09713138088534379
NSLRVILQA	9	Unmodified	_NSLRVILQA_					0	0	0		ENST00000478923.1_1_X:15768116-15768332:+|nuORF;ENST00000380313.1_1_X:15768116-15781019:+|nuORF;ENST00000380319.2_1_X:15768116-15782978:+|nuORF;ENSG00000169239|ENST00000318636|CA5B	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	ENST00000478923.1_1_X:15768116-15768332:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	507.308741	1012.60293	-1.5912	-0.00080722	1.6259	0.00082484	0.034736	1.7622E-05	507.3096082892176	102.19	0.9675	102.32	101.97	102.94	0.13569	-0.03815	0.0014654	NaN	21.96	45	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	202570			39352	6478	26209	26221							0.09713138088534379
NSLSEKTR	8	Unmodified	_NSLSEKTR_					0	0	0		ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-3|CBLB;nc|ENSG00000114423|Q13191-2|CBLB	ENSG00000114423|ENST00000394030|CBLB	ENSG00000114423|ENST00000394030|CBLB	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.753662109375	2	467.751256	933.487959	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.759	1	56.864	56.364	57.364	0.1055								0	0	0	0.29703	1	4790	4790		37.159	2.9866	1				39353	2769	26210	26222	44773	44773					0.018554088867176688
NSLTTKKV	8	Unmodified	_NSLTTKKV_					0	0	0		L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.63604736328125	2	445.768917	889.523281	1.6138	0.0007194	-2.2735	-0.0010135	-0.65968	-0.00029406	445.76788219223147	36.329	0.82428	36.769	36.372	37.197	0.44043					27	19	2	0	0	0	0.4196	1	2917	2917		14.865	5.682	1	88907			39354	14637	26211	26223	44774	44774					0.0741007141452883
NSLTTKKV	8	Unmodified	_NSLTTKKV_					0	0	0		L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	445.768917	889.523281	-0.049734	-2.217E-05	3.55	0.0015825	3.5002	0.0015603	445.76934097982195	36.772	0.17986	36.754	36.641	36.821	-0.018673	-0.0078861	0.0040292	NaN	14.865	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17604			39355	14637	26211	26223							0.0741007141452883
NSLVKKYKYIK	11	Unmodified	_NSLVKKYKYIK_					0	0	0			REV__nc|ENSG00000153815|Q8IY22-3|CMIP	REV__nc|ENSG00000153815|Q8IY22-3|CMIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	461.9481506347656	3	461.950134	1382.82857	0.60317	0.00027863	-4.0954	-0.0018919	-3.4922	-0.0016132	461.94799833585347	104.88	2.7298	104.92	104.34	107.07	0.039856					179	64	5	0	0	0	0.77803	1	11438	11438		15.921	1.227	1	795280	+		39356	20358	26212	26224	44775	44775					0.15247042487885665
NSMGFGAER	9	Unmodified	_NSMGFGAER_					0	0	0		nc|ENSG00000009307|O75534-2|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.7180480957031	2	484.716359	967.418164	0.76608	0.00037133	3.3413	0.0016196	4.1074	0.0019909	484.71784448733064	98.881	4.1852	99.038	95.672	99.857	0.15659					143	97	2	0	0	0	0.77244	1	10373	10373		32.812	0.85756	1	472970			39357	752	26213	26225	44776	44776					-0.06684793053545945
NSMIIIIHL	9	Unmodified	_NSMIIIIHL_					0	0	0		nc|ENSG00000004948|P30988-5|CALCR;nc|ENSG00000004948|P30988-6|CALCR;nc|ENSG00000004948|P30988-3|CALCR;nc|ENSG00000004948|P30988-4|CALCR;ENSG00000004948|ENST00000426151|CALCR;nc|ENSG00000004948|P30988-1|CALCR	nc|ENSG00000004948|P30988-5|CALCR	nc|ENSG00000004948|P30988-5|CALCR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.31103515625	2	527.309895	1052.60524	0.16127	8.5039E-05	2.5635	0.0013517	2.7247	0.0014368	527.3111035367203	79.218	1.2329	79.768	79.023	80.256	0.54945					64	28	3	0	0	0	0.62081	1	9115	9115		45.952	3.5558	1	880030			39358	669	26214	26226	44777	44777					0.08103850501970555
NSMKKTKS	8	Unmodified	_NSMKKTKS_					0	0	0		ENSG00000156920|ENST00000394143|ADGRG4;nc|ENSG00000156920|Q8IZF6-2|ADGRG4;nc|ENSG00000156920|Q8IZF6-3|ADGRG4	ENSG00000156920|ENST00000394143|ADGRG4	ENSG00000156920|ENST00000394143|ADGRG4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.2743835449219	2	462.252577	922.490601	0.62109	0.0002871	1.8822	0.00087005	2.5033	0.0011572	462.25351065486416	51.172	0.57631	51.924	51.655	52.231	0.75174					27	13	3	0	0	0	0.4196	1	5128	5128		31.53	8.4873	1	630570			39359	5401	26215	26227	44778	44778					0.026255410200292317
NSMQSEYR	8	Unmodified	_NSMQSEYR_					0	0	0		ENST00000493902.5_1_16:31047079-31051121:+|nuORF;ENST00000487411.5_1_16:31045754-31051121:+|nuORF;nc|ENSG00000103496|Q12846-2|STX4;ENSG00000103496|ENST00000313843|STX4	ENST00000493902.5_1_16:31047079-31051121:+|nuORF	ENST00000493902.5_1_16:31047079-31051121:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.3013916015625	2	507.719098	1013.42364	-0.47287	-0.00024009	-3.9829	-0.0020222	-4.4558	-0.0022623	507.7174289518841	70.93	0.50365	71.314	71.042	71.545	0.38449					17	11	2	0	0	0	0.4196	1	7880	7880		53.351	21.822	1	64785			39360	2086	26216	26228	44779	44779					-0.08253114261731298
NSMSKWRSGLI	11	Oxidation (M)	_NSM(Oxidation (M))SKWRSGLI_		NSM(1)SKWRSGLI		NSM(48)SKWRSGLI	0	0	1			REV__nc|ENSG00000110693|P35712-3|SOX6	REV__nc|ENSG00000110693|P35712-3|SOX6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2222900390625	3	432.223928	1293.64996	-1.2201	-0.00052735	-2.6085	-0.0011275	-3.8286	-0.0016548	432.2227949823204	39.449	1.1723	39.817	39.299	40.472	0.36797					49	27	2	0	0	0	0.55276	1	3278	3278		48.188	10.68	1	3594900	+		39361	17823	26217	26229	44780	44780		258			0.014876295773547099
NSMVLVPKQT	10	Oxidation (M)	_NSM(Oxidation (M))VLVPKQT_		NSM(1)VLVPKQT		NSM(52)VLVPKQT	0	0	1		L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|50|1|sense	L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|50|1|sense	L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|50|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.8055419921875	2	566.805174	1131.59579	-0.52899	-0.00029983	0.92267	0.00052297	0.39368	0.00022314	566.8055131198089	62.726	2.3736	63.113	62.36	64.733	0.38779					117	54	3	0	0	0	0.57305	1	6791	6791		51.528	7.877	1	633890			39362	14651	26218	26230	44781	44781		209			0.03526037425785944
NSNACHEMDD	10	Unmodified	_NSNACHEMDD_					0	0	0		nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-6|SP140;nc|ENSG00000079263|Q13342-5|SP140;ENSG00000079263|ENST00000392045|SP140	nc|ENSG00000079263|Q13342-2|SP140	nc|ENSG00000079263|Q13342-2|SP140	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.1907958984375	2	568.192587	1134.37062	1.1538	0.0006556	-1.8414	-0.0010463	-0.68761	-0.00039069	568.191496061514	24.425	1.9431	24.382	23.444	25.387	-0.043221					101	52	3	0	0	0	0.86444	1	835	835		14.865	0	1	65822			39363	1413	26219	26231	44782	44782					-0.1911886010670969
NSNELDKF	8	Unmodified	_NSNELDKF_					0	0	0			REV__chr14:68468250-68540200|51|15.84|0.76|4.39|+|0|RAD51B,RAD51B|1	REV__chr14:68468250-68540200|51|15.84|0.76|4.39|+|0|RAD51B,RAD51B|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7288513183594	2	483.729989	965.445425	-0.76587	-0.00037047	-1.8588	-0.00089915	-2.6247	-0.0012696	483.72888486758	72.257	0.87394	72.643	72.125	72.999	0.38581					43	20	3	0	0	0	0.91977	1	8096	8096		45.952	1.8352	1	1359000	+		39364	15604	26220	26232	44783	44783					-0.03867986241516519
NSNKDGDQH	9	Unmodified	_NSNKDGDQH_					0	0	0		nc|ENSG00000133816|O94851|MICAL2	nc|ENSG00000133816|O94851|MICAL2	nc|ENSG00000133816|O94851|MICAL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3023986816406	2	507.715402	1013.41625	0.68145	0.00034598	2.9188	0.0014819	3.6003	0.0018279	507.7166567805122	70.84	0.41548	71.387	71.2	71.615	0.54756					12	9	2	0	0	0	0.20789	1	7881	7881		56.721	19.562	1	70007			39365	14929	26221	26233	44784	44784					-0.08992130537808407
NSNLTYFLIAV	11	Unmodified	_NSNLTYFLIAV_					0	0	0			REV__ENSG00000111339|ENST00000228936|ART4	REV__ENSG00000111339|ENST00000228936|ART4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	628.2885131835938	2	627.840071	1253.66559	-0.58032	-0.00036435	-2.5788	-0.0016191	-3.1591	-0.0019834	628.339854688673	51.468	0.50256	51.445	51.194	51.697	-0.02343					17	11	2	0	0	0	0.62614	1	4478	4478		41.427	8.6142	1	91382	+		39366	17868	26222	26234	44785	44785					0.04890239366068272
NSNLTYFLIAV	11	Unmodified	_NSNLTYFLIAV_					0	0	0			REV__ENSG00000111339|ENST00000228936|ART4	REV__ENSG00000111339|ENST00000228936|ART4	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	627.840071	1253.66559	-0.58032	-0.00036435	-2.5788	-0.0016191	-3.1591	-0.0019834	628.339854688673	51.468	0.50256	51.445	51.194	51.697	-0.02343	-0.13894	0.00029967	NaN	41.427	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91382	+		39367	17868	26222	26234							0.04890239366068272
NSNLTYFLIAV	11	Unmodified	_NSNLTYFLIAV_					0	0	0			REV__ENSG00000111339|ENST00000228936|ART4	REV__ENSG00000111339|ENST00000228936|ART4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	627.840071	1253.66559	0.48436	0.0003041	-3.1035	-0.0019485	-2.6191	-0.0016444	627.8380524631311	51.663	0.39331	51.723	51.457	51.85	0.059719	0.13894	-0.00035913	NaN	41.427	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79735	+		39368	17868	26222	26234							0.04890239366068272
NSNMRLPPA	9	Unmodified	_NSNMRLPPA_					0	0	0			REV__ENSG00000077264|ENST00000372007|PAK3	REV__ENSG00000077264|ENST00000372007|PAK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.7557678222656	2	500.255651	998.496749	0.39483	0.00019752	1.3337	0.00066719	1.7285	0.0008647	500.25630170219046	55.473	0.82754	55.564	55.225	56.053	0.091167					32	26	2	0	0	0	0.77546	1	4640	4640		31.955	3.7006	1	80849	+		39369	16742	26223	26235	44786	44786					-0.002559407484682197
NSNMRLPPA	9	Unmodified	_NSNMRLPPA_					0	0	0			REV__ENSG00000077264|ENST00000372007|PAK3	REV__ENSG00000077264|ENST00000372007|PAK3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	500.255651	998.496749	-0.5771	-0.0002887	2.4123	0.0012068	1.8352	0.00091809	500.256644804098	55.539	0.52696	55.603	55.343	55.87	0.063721	0.048698	0.00061528	NaN	31.955	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87657	+		39370	16742	26223	26235							-0.002559407484682197
NSNMRLPPA	9	Unmodified	_NSNMRLPPA_					0	0	0			REV__ENSG00000077264|ENST00000372007|PAK3	REV__ENSG00000077264|ENST00000372007|PAK3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	500.255651	998.496749	0.39483	0.00019752	1.3337	0.00066719	1.7285	0.0008647	500.25630170219046	55.473	0.82754	55.564	55.225	56.053	0.091167	0.0092456	-0.00046391	NaN	31.955	32	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80849	+		39371	16742	26223	26235							-0.002559407484682197
NSNMRLPPA	9	Unmodified	_NSNMRLPPA_					0	0	0			REV__ENSG00000077264|ENST00000372007|PAK3	REV__ENSG00000077264|ENST00000372007|PAK3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	500.255651	998.496749	-0.46279	-0.00023151	1.9409	0.00097092	1.4781	0.00073941	500.25647786664507	55.533	0.60284	55.497	55.243	55.846	-0.036823	-0.057944	0.00014357	NaN	31.955	31	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102450	+		39372	16742	26223	26235							-0.002559407484682197
NSNWIGIK	8	Unmodified	_NSNWIGIK_					0	0	0			REV__nc|ENSG00000171189|P39086-2|GRIK1	REV__nc|ENSG00000171189|P39086-2|GRIK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2554016113281	2	466.253434	930.492316	-1.1758	-0.0005482	2.0913	0.00097508	0.91555	0.00042688	466.2543991016111	65.399	1.0395	65.426	64.51	65.549	0.027321					47	39	2	0	0	0	0.87064	1	6163	6163		29.15	4.9468	1	195200	+		39373	21719	26224	26236	44787	44787					0.024289181002927762
NSPATPLI	8	Unmodified	_NSPATPLI_					0	0	0			REV__ENST00000418386.2_1_6:31540714-31541135:+|nuORF	REV__ENST00000418386.2_1_6:31540714-31541135:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7292175292969	2	406.729261	811.443968	0.50952	0.00020724	-3.3416	-0.0013591	-2.832	-0.0011519	406.72784334119905	75.995	2.0602	76.129	74.764	76.824	0.13325					108	61	2	0	0	0	0.79929	1	7120	7120		18.324	0.95945	1	114450	+		39374	26461	26225	26237	44788	44788					0.03070424460383947
NSPFLFPL	8	Unmodified	_NSPFLFPL_					0	0	0		ENST00000360772.7_2_3:123332334-123332625:-|nuORF	ENST00000360772.7_2_3:123332334-123332625:-|nuORF	ENST00000360772.7_2_3:123332334-123332625:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.75286865234375	2	467.755278	933.496004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.761	1	56.733	56.233	57.233	-0.02866								0	0	0	0.30045	1	5205	5205		40.573	1.7665	1				39375	10455	26226	26238	44789	44789					0.026595878741318302
NSPFSSGSSV	10	Unmodified	_NSPFSSGSSV_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;ENSG00000166833|ENST00000349880|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1-5|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71795654296875	2	484.719621	967.42469	1.0671	0.00051723	-3.9124	-0.0018964	-2.8453	-0.0013792	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.82886	1	11817	11817		37.812	6.2817	1	7522200			39376	15072	26227	26239	44790	44790					-0.06032576621169028
NSPLGSFR	8	Unmodified	_NSPLGSFR_					0	0	0			REV__ENST00000531428.1_1_11:17113817-17167232:-|nuORF	REV__ENST00000531428.1_1_11:17113817-17167232:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.2525329589844	2	439.229959	876.445365	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.101	1	17.019	16.519	17.519	-0.0821								0	0	0	0.29245	1	204	204		30.504	3.7075	1		+		39377	16184	26228	26240	44791	44791					0.0022005854914368683
NSPLKNMK	8	Unmodified	_NSPLKNMK_					0	0	0			REV__ENST00000498522.5_1_9:35605559-35607650:+|nuORF	REV__ENST00000498522.5_1_9:35605559-35607650:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.25408935546875	2	466.25512	930.495686	-1.5133	-0.00070558	-1.0867	-0.00050666	-2.6	-0.0012122	466.2545098406443	61.17	1.13	61.17	60.102	61.232	0					111	49	3	0	0	0	0.8347	1	5298	5298		23.042	1.0826	1	374960	+		39378	17645	26229	26241	44792	44792					0.027658448826286985
NSPLLFGR	8	Unmodified	_NSPLLFGR_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.2535705566406	2	452.255977	902.497401	-0.039998	-1.8089E-05	-0.50017	-0.00022621	-0.54017	-0.00024429	452.25554941607226	51.181	0.50812	51.179	50.93	51.439	-0.0020447					17	11	2	0	0	0	0.8537	1	4396	4396		25.574	0	1	67321			39379	2871	26230	26242	44793	44793					0.04225221962906289
NSPLLFGR	8	Unmodified	_NSPLLFGR_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	452.255977	902.497401	-0.71615	-0.00032388	0.99665	0.00045074	0.2805	0.00012686	452.25608415632723	51.291	0.45168	51.268	50.99	51.442	-0.02343	-0.044576	0.00072545	NaN	25.574	19	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63133			39380	2871	26230	26242							0.04225221962906289
NSPLLFGR	8	Unmodified	_NSPLLFGR_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	452.255977	902.497401	-1.2947	-0.00058551	1.6098	0.00072805	0.31517	0.00014254	452.2564260521674	51.41	0.65601	51.445	51.115	51.771	0.034588	0.13272	0.0012801	NaN	25.574	25	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89989			39381	2871	26230	26242							0.04225221962906289
NSPLLFGR	8	Unmodified	_NSPLLFGR_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	452.255977	902.497401	0.3102	0.00014029	-0.86882	-0.00039293	-0.55862	-0.00025264	452.25550132106866	51.354	0.51672	51.404	51.142	51.659	0.049896	0.091491	-0.00096189	NaN	25.574	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96925			39382	2871	26230	26242							0.04225221962906289
NSPLLFGR	8	Unmodified	_NSPLLFGR_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	452.255977	902.497401	-0.46843	-0.00021185	0.40739	0.00018425	-0.061037	-2.7604E-05	452.25603867893926	51.378	0.50006	51.294	51.011	51.511	-0.084538	-0.018653	0.00019246	NaN	25.574	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94568			39383	2871	26230	26242							0.04225221962906289
NSPLPQNNVV	10	Unmodified	_NSPLPQNNVV_					0	0	0			REV__ENSG00000181433|ENST00000370709|SAGE1	REV__ENSG00000181433|ENST00000370709|SAGE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.2857055664062	2	541.285463	1080.55637	0.90507	0.0004899	-0.97301	-0.00052668	-0.06794	-3.6775E-05	541.2848148372841	20.292	0.81443	20.271	20.029	20.843	-0.020922					88	41	3	0	0	0	0.85981	1	488	488		35.152	3.5178	1	521470	+		39384	22460	26231	26243	44794	44794					0.019316534665676954
NSPMMYPQ	8	Oxidation (M)	_NSPM(Oxidation (M))MYPQ_		NSPM(0.958)M(0.042)YPQ		NSPM(14)M(-14)YPQ	0	0	1		ENSG00000196782|ENST00000509479|MAML3	ENSG00000196782|ENST00000509479|MAML3	ENSG00000196782|ENST00000509479|MAML3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2007751464844	2	492.201696	982.388838	-0.69223	-0.00034072	0.55708	0.00027419	-0.13515	-6.6523E-05	492.20187562901464	58.205	0.84068	58.292	58.02	58.86	0.087002					63	36	2	0	0	0	0.91472	1	4955	4955		44.117	6.3053	2	345760			39385	8102	26232	26244	44795	44795		138			-0.10306073394042414
NSPMTRLL	8	Unmodified	_NSPMTRLL_					0	0	0			REV__ENST00000478085.5_1_22:40800171-40802852:+|nuORF	REV__ENST00000478085.5_1_22:40800171-40802852:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.2538757324219	2	466.25512	930.495686	0.40858	0.0001905	-3.173	-0.0014794	-2.7644	-0.0012889	466.2535455662522	60.895	1.1821	61.014	60.015	61.197	0.11901					69	45	2	0	0	0	0.87064	1	5296	5296		29.15	3.6994	1	266480	+		39386	17180	26233	26245	44796	44796					0.027658448826400672
NSPPGQYKS	9	Unmodified	_NSPPGQYKS_					0	0	0		ENSG00000109424|ENST00000262999|UCP1	ENSG00000109424|ENST00000262999|UCP1	ENSG00000109424|ENST00000262999|UCP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.2363586425781	2	489.237981	976.461409	0.45265	0.00022146	-3.6619	-0.0017915	-3.2092	-0.0015701	489.23621768021786	62.918	2.6052	63.04	62.714	65.319	0.12252					281	107	5	0	0	0	0.79277	1	5632	5632		27.047	0	1	3811100			39387	2460	26234	26246	44797	44797					-0.027762800046275515
NSPSAKTF	8	Unmodified	_NSPSAKTF_					0	0	0			REV__nc|ENSG00000001631|O00522-2|KRIT1	REV__nc|ENSG00000001631|O00522-2|KRIT1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.77490234375	2	426.216517	850.418482	0.18347	7.8197E-05	0.9182	0.00039135	1.1017	0.00046955	426.2167856210822	39.733	0.56451	39.821	39.489	40.053	0.088375					19	13	2	0	0	0	0.4196	1	2425	2425		34.173	0	1	84094	+		39388	16044	26235	26247	44798	44798					-0.012710500620528364
NSPSIKCEDI	10	Unmodified	_NSPSIKCEDI_					0	0	0		nc|ENSG00000163508|O95936-3|EOMES;nc|ENSG00000163508|O95936-2|EOMES;nc|ENSG00000163508|O95936|EOMES;ENSG00000163508|ENST00000449599|EOMES	nc|ENSG00000163508|O95936-3|EOMES	nc|ENSG00000163508|O95936-3|EOMES	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.2616577148438	2	553.263339	1104.51212	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.003	1	73.045	72.545	73.545	0.042114								0	0	0	0.45132	1	7042	7042		45.022	2.6261	1				39389	5810	26236	26248	44799	44799					-0.035951187419414055
NSPTKKREP	9	Unmodified	_NSPTKKREP_					0	0	0			REV__ENSG00000203872|ENST00000388923|C6orf163	REV__ENSG00000203872|ENST00000388923|C6orf163	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.7943115234375	2	528.793455	1055.57236	-0.70681	-0.00037376	0.44833	0.00023708	-0.25848	-0.00013668	528.7935602407883	36.229	1.4862	36.239	35.797	37.283	0.0092773					80	32	4	0	0	0	0.55097	1	2384	2384		49.442	8.8689	1	1332400	+		39390	23442	26237	26249	44800	44800					0.046793597034593404
NSPVLSERSLL	11	Unmodified	_NSPVLSERSLL_					0	0	0		ENSG00000047648|ENST00000337414|ARHGAP6;nc|ENSG00000047648|O43182-4|ARHGAP6;nc|ENSG00000047648|O43182-2|ARHGAP6;nc|ENSG00000047648|O43182-5|ARHGAP6	ENSG00000047648|ENST00000337414|ARHGAP6	ENSG00000047648|ENST00000337414|ARHGAP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5652160644531	3	405.562827	1213.66665	0.049875	2.0228E-05	4.1009	0.0016632	4.1508	0.0016834	405.5644031089545	61.094	0.39898	61.061	60.713	61.112	-0.032509					28	15	2	0	0	0	0.74763	1	5782	5782		25.892	5.5767	1	359570			39391	967	26238	26250	44801	44801					0.06836453734968018
NSQELLEPK	9	Unmodified	_NSQELLEPK_					0	0	0		nc|nan|Q8N5S3-2|C2orf73;ENSG00000177994|ENST00000398634|C2orf73	nc|nan|Q8N5S3-2|C2orf73	nc|nan|Q8N5S3-2|C2orf73	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7637329101562	2	529.279846	1056.54514	-0.27961	-0.00014799	0.71787	0.00037996	0.43826	0.00023196	529.2809453472951	60.744	0.46289	61.133	60.859	61.322	0.38945					25	12	3	0	0	0	0.20789	1	6447	6447		45.972	0	1	304730			39392	7174	26239	26251	44802	44802					0.019128313724195323
NSQPATPRIQ	10	Unmodified	_NSQPATPRIQ_					0	0	0		ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.2960205078125	2	556.296362	1110.57817	0.69945	0.0003891	2.7268	0.0015169	3.4262	0.001906	556.2978114262426	68.023	0.70552	68.408	68.073	68.779	0.38482					27	16	2	0	0	0	0.33399	1	7476	7476		69.628	7.5202	1	338050			39393	4071	26240	26252	44803	44803					0.027304582151373324
NSQPATPRIQ	10	Unmodified	_NSQPATPRIQ_					0	0	0		ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	556.296362	1110.57817	-0.24571	-0.00013669	3.5903	0.0019973	3.3446	0.0018606	556.2981877058498	67.937	0.7561	68.486	68.028	68.784	0.54819	0.038983	0.00051884	NaN	69.628	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	260210			39394	4071	26240	26252							0.027304582151373324
NSRAHARTRAR	11	Unmodified	_NSRAHARTRAR_					0	0	0		ENST00000486255.1_1_X:151123175-151124345:-|nuORF;ENSG00000102287|ENST00000370328|GABRE	ENST00000486255.1_1_X:151123175-151124345:-|nuORF	ENST00000486255.1_1_X:151123175-151124345:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5975646972656	3	432.576575	1294.7079	-1.8326	-0.00079273	2.3361	0.0010106	0.50357	0.00021783	432.57761866458816	105.65	0.82153	105.72	105.22	106.04	0.07312					30	20	2	0	0	0	0.17273	1	11253	11253		22.781	0	1	86139			39395	1997	26241	26253	44804	44804					0.07233072337635349
NSRARLHQ	8	Unmodified	_NSRARLHQ_					0	0	0		ENST00000430801.5_1_7:77290551-77325505:-|nuORF;ENST00000416650.5_1_7:77313641-77325505:-|nuORF	ENST00000430801.5_1_7:77290551-77325505:-|nuORF	ENST00000430801.5_1_7:77290551-77325505:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2711486816406	2	491.270481	980.52641	-0.41025	-0.00020154	3.0344	0.0014907	2.6242	0.0012892	491.27177465944953	53.462	0.70897	54.076	53.696	54.405	0.61436					38	16	3	0	0	0	0.89494	1	5434	5434		37.159	1.5408	1	812070			39396	11638	26242	26254	44805	44805					0.03536759311884907
NSREVSLLK	9	Unmodified	_NSREVSLLK_					0	0	0			REV__nc|ENSG00000115607|O95256-2|IL18RAP	REV__nc|ENSG00000115607|O95256-2|IL18RAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3042602539062	2	523.303655	1044.59276	2.1374	0.0011185	-1.9743	-0.0010331	0.16314	8.5373E-05	523.3025163753626	100.8	0.70826	101.1	100.73	101.44	0.2999					53	17	4	0	0	0	0.78124	1	12200	12200		30.318	3.6248	1	971240	+		39397	18136	26243	26255	44806	44806					0.07224530363282611
NSRHEIYK	8	Unmodified	_NSRHEIYK_					0	0	0			REV__chr19:56824514-56836018|39|11.51|0.17|6.04|-|ENST00000647621|ZIM2,ZIM2	REV__chr19:56824514-56836018|39|11.51|0.17|6.04|-|ENST00000647621|ZIM2,ZIM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7722778320312	2	523.772522	1045.53049	-0.35012	-0.00018338	-1.5445	-0.00080899	-1.8947	-0.00099238	523.7715817958979	60.118	0.50011	60.509	60.254	60.754	0.39077					20	13	2	0	0	0	0.9283	1	6355	6355		49.442	1.7842	1	365670	+		39398	15723	26244	26256	44807	44807					0.009548040149411463
NSRIIKIG	8	Unmodified	_NSRIIKIG_					0	0	0		ENSG00000176742|ENST00000641270|OR51V1;nc|ENSG00000176742|Q9H2C8|OR51V1	ENSG00000176742|ENST00000641270|OR51V1	ENSG00000176742|ENST00000641270|OR51V1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.78741455078125	2	450.784902	899.55525	-0.13989	-6.3061E-05	3.7727	0.0017007	3.6328	0.0016376	450.7864109943189	110.25	1.2033	110.2	110.06	111.26	-0.055084					54	43	2	0	0	0	0.82658	1	11985	11985		21.96	1.013	1	249360			39399	7096	26245	26257	44808	44808					0.10145483888322815
NSRIPPPV	8	Unmodified	_NSRIPPPV_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.25531005859375	2	440.255977	878.497401	-1.4867	-0.00065454	0.10608	4.6703E-05	-1.3806	-0.00060783	440.2558792148897	67.228	0.84634	67.361	67.023	67.869	0.13326					70	34	3	0	0	0	0.86288	1	5983	5983		26.796	2.5934	1	457950			39400	3499	26246	26258	44809	44809					0.05329221962892916
NSRIPPPV	8	Unmodified	_NSRIPPPV_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2544250488281	2	440.255977	878.497401	0.43383	0.000191	-1.7245	-0.00075924	-1.2907	-0.00056825	440.2551344280369	66.668	0.61041	66.795	66.527	67.137	0.12649					60	27	3	0	0	0	0.84341	1	5964	5964		24.203	4.8428	1	272000			39401	3499	26246	26258	44810	44810					0.05329221962892916
NSRIPPPV	8	Unmodified	_NSRIPPPV_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2554626464844	2	440.255977	878.497401	-0.8618	-0.00037941	-0.60853	-0.00026791	-1.4703	-0.00064732	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.80706	1	6844	6844		19.36	1.0356	1	1365500			39402	3499	26246	26258	44811	44811					0.05329221962892916
NSRKGAAF	8	Unmodified	_NSRKGAAF_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747497558594	2	425.730126	849.4457	0.3865	0.00016455	3.856	0.0016416	4.2425	0.0018062	425.73368367184406	37.632	0.23227	37.945	37.786	38.018	0.31312					10	5	3	0	0	0	0.4196	1	3025	3025		24.203	0	1	62653			39403	4137	26247	26259	44812	44812					0.014954782689983404
NSRKLHALST	10	Unmodified	_NSRKLHALST_					0	0	0		ENST00000431082.1_1_3:50757009-50757354:-|nuORF	ENST00000431082.1_1_3:50757009-50757354:-|nuORF	ENST00000431082.1_1_3:50757009-50757354:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.8156127929688	2	563.820004	1125.62546	-1.2239	-0.00069008	-4.0885	-0.0023052	-5.3124	-0.0029952	563.8176885194346	53.777	0.95777	53.771	53.358	54.315	-0.0053711					44	26	3	0	0	0	0.85251	1	4719	4719		19.997	0	1	93872			39404	11642	26248	26260	44813	44813					0.0676673748612302
NSRLLCSVVW	10	Carbamidomethyl (C)	_NSRLLC(Carbamidomethyl (C))SVVW_	NSRLLC(1)SVVW		NSRLLC(55)SVVW		0	1	0		ENST00000568945.2_1_15:23811797-23872913:+|nuORF	ENST00000568945.2_1_15:23811797-23872913:+|nuORF	ENST00000568945.2_1_15:23811797-23872913:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	617.8236083984375	2	617.324065	1232.63358	-0.89385	-0.0005518	-2.0763	-0.0012817	-2.9701	-0.0018335	617.8244722055176	56.65	0.38211	56.683	56.581	56.963	0.033184					21	13	2	0	0	0	0.51302	2	5115	5115;5142		54.776	14.875	1	313540			39405	13972	26249	26261	44814;44815	44814	186				0.02656548411255244
NSRQWHLRRWW	11	Unmodified	_NSRQWHLRRWW_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7851257324219	4	406.964363	1623.82835	0.32949	0.00013409	-1.0451	-0.00042532	-0.71561	-0.00029123	407.21462341624596	29.609	0.68434	29.519	29.276	29.96	-0.089546					36	15	4	0	0	0	0.18209	1	1935	1935		4.6433	0	1	171140	+		39406	26616	26250	26262	44816	44816					0.04138480331221217
NSRRVINEL	9	Unmodified	_NSRRVINEL_					0	0	0			REV__nc|ENSG00000143473|O95259-2|KCNH1	REV__nc|ENSG00000143473|O95259-2|KCNH1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.8092651367188	2	550.812179	1099.60981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.086	1	61.054	60.554	61.554	-0.032509								0	0	0	0.301	1	5787	5787		30.318	3.5216	1		+		39407	19813	26251	26263	44817	44817					0.06398450969095393
NSRSDQQAQ	9	Unmodified	_NSRSDQQAQ_					0	0	0		nc|ENSG00000090905|Q8NDV7-2|TNRC6A;nc|ENSG00000090905|Q8NDV7-6|TNRC6A;nc|ENSG00000090905|Q8NDV7-5|TNRC6A;ENSG00000090905|ENST00000395799|TNRC6A;ENST00000568903.5_1_16:24803023-24807335:+|nuORF	nc|ENSG00000090905|Q8NDV7-2|TNRC6A	nc|ENSG00000090905|Q8NDV7-2|TNRC6A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.751708984375	2	517.236501	1032.45845	-0.47675	-0.00024659	4.1064	0.002124	3.6297	0.0018774	517.2385180137243	29.232	1.4367	29.202	28.779	30.216	-0.029207					49	32	2	0	0	0	0.20789	1	1769	1769		33.922	19.785	1	243550			39408	1659	26252	26264	44818	44818					-0.056481551294155
NSRTSRKRR	9	Unmodified	_NSRTSRKRR_					0	0	0			REV__ENST00000509799.5_1_5:124080839-124084286:-|nuORF	REV__ENST00000509799.5_1_5:124080839-124084286:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	580.8408203125	2	580.839594	1159.66463	-0.77465	-0.00044995	2.5711	0.0014934	1.7964	0.0010434	580.8409079649531	69.999	0.8299	69.999	69.758	70.588	0					106	43	3	0	0	0	0.7932	1	6252	6252		25.574	0.12388	1	7674300	+		39409	27941	26253	26265	44819	44819					0.0911888256034672
NSRTSRKRR	9	Unmodified	_NSRTSRKRR_					0	0	0			REV__ENST00000509799.5_1_5:124080839-124084286:-|nuORF	REV__ENST00000509799.5_1_5:124080839-124084286:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.8405151367188	2	580.839594	1159.66463	-0.88113	-0.0005118	2.4493	0.0014227	1.5682	0.00091085	580.8408357600173	69.895	0.91608	69.925	69.626	70.542	0.030502					112	46	3	0	0	0	0.66686	1	6606	6606		42.864	7.7122	1	15247000	+		39410	27941	26253	26265	44820	44820					0.0911888256034672
NSRVDDTFW	9	Unmodified	_NSRVDDTFW_					0	0	0		ENST00000573075.5_1_17:1616216-1617149:-|nuORF;nc|ENSG00000186594|Q0VDD5|MIR22HG;ENST00000608913.5_1_17:1616268-1617149:-|nuORF;ENST00000575626.5_1_17:1616063-1617149:-|nuORF;ENST00000609398.5_1_17:1616063-1617149:-|nuORF	ENST00000573075.5_1_17:1616216-1617149:-|nuORF	ENST00000573075.5_1_17:1616216-1617149:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.763671875	2	570.259445	1138.50434	0.47262	0.00026951	-1.1128	-0.00063456	-0.64013	-0.00036504	570.2587836391257	63.069	0.50438	63.183	62.915	63.419	0.11388					35	23	2	0	0	0	0.75725	1	5499	5499		36.447	0.12911	1	135130			39411	14016	26254	26266	44821	44821					-0.05937509947216313
NSRVDDTFW	9	Unmodified	_NSRVDDTFW_					0	0	0		ENST00000573075.5_1_17:1616216-1617149:-|nuORF;nc|ENSG00000186594|Q0VDD5|MIR22HG;ENST00000608913.5_1_17:1616268-1617149:-|nuORF;ENST00000575626.5_1_17:1616063-1617149:-|nuORF;ENST00000609398.5_1_17:1616063-1617149:-|nuORF	ENST00000573075.5_1_17:1616216-1617149:-|nuORF	ENST00000573075.5_1_17:1616216-1617149:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	570.259445	1138.50434	0.5305	0.00030253	-1.3019	-0.00074242	-0.77139	-0.00043989	570.258681972811	63.013	0.51194	63.136	62.89	63.402	0.12252	-0.034235	-0.00062941	NaN	36.447	32	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134560			39412	14016	26254	26266							-0.05937509947216313
NSSAGGGA	8	Unmodified	_NSSAGGGA_					0	0	0		ENSG00000088038|ENST00000221232|CNOT3	ENSG00000088038|ENST00000221232|CNOT3	ENSG00000088038|ENST00000221232|CNOT3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.8110961914062	1	620.263444	619.256168	0.13681	8.4857E-05	-0.87124	-0.0005404	-0.73443	-0.00045554	620.2662769603738	59.481	0.12078	60.034	59.958	60.079	0.55323					4	2	2	0	0	0	0.4196	1	6279	6279		11.511	0	1	142710			39413	1584	26255	26267	44822	44822					-0.06869013744187669
NSSHLFVK	8	Unmodified	_NSSHLFVK_					0	0	0		ENSG00000253598|ENST00000518568|SLC10A5	ENSG00000253598|ENST00000518568|SLC10A5	ENSG00000253598|ENST00000518568|SLC10A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.25408935546875	2	466.253434	930.492316	-0.7568	-0.00035286	1.6057	0.00074864	0.84886	0.00039578	466.25405843319766	61.038	1.081	61.046	60.083	61.164	0.0081177					68	38	2	0	0	0	0.89043	1	5240	5240		35.618	2.8059	1	201940			39414	8862	26256	26268	44823	44823					0.024289181002927762
NSSHWDHD	8	Unmodified	_NSSHWDHD_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.19293212890625	2	499.191562	996.368572	0.8372	0.00041792	2.2667	0.0011315	3.1039	0.0015495	499.1925125011114	95.874	0.69936	96.295	95.948	96.648	0.42051					44	16	3	0	0	0	0.87064	1	11473	11473		29.15	1.0681	1	1508500			39415	7038	26257	26269	44824	44824					-0.12975784738000584
NSSHWDHD	8	Unmodified	_NSSHWDHD_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.1929626464844	2	499.191562	996.368572	0.63603	0.0003175	2.2664	0.0011313	2.9024	0.0014488	499.1926971051662	95.97	0.73779	96.375	96.012	96.75	0.40451					55	17	4	0	0	0	0.87479	1	11536	11536		30.504	1.3541	1	1507600			39416	7038	26257	26269	44825	44825					-0.12975784738000584
NSSHWDHD	8	Unmodified	_NSSHWDHD_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.19476318359375	2	499.191562	996.368572	1.8635	0.00093024	1.0702	0.00053421	2.9337	0.0014645	499.1920958208035	99.433	1.2224	99.796	99.447	100.67	0.36292					73	30	4	0	0	0	0.85277	1	12040	12040		25.45	1.2474	1	1640300			39417	7038	26257	26269	44826	44826					-0.12975784738000584
NSSIIWQLLP	10	Unmodified	_NSSIIWQLLP_					0	0	0			REV__nc|ENSG00000137817|Q2NL67-2|PARP6	REV__nc|ENSG00000137817|Q2NL67-2|PARP6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.828125	2	585.829506	1169.64446	-0.90054	-0.00052756	1.7294	0.0010131	0.82884	0.00048556	585.8305105735789	59.591	0.89731	59.591	59.162	60.06	0					55	35	2	0	0	0	0.86218	1	5200	5200		32.812	1.1781	1	110350	+		39418	19412	26258	26270	44827	44827					0.06642274057185205
NSSIIWQLLP	10	Unmodified	_NSSIIWQLLP_					0	0	0			REV__nc|ENSG00000137817|Q2NL67-2|PARP6	REV__nc|ENSG00000137817|Q2NL67-2|PARP6	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	585.829506	1169.64446	-0.90054	-0.00052756	1.7294	0.0010131	0.82884	0.00048556	585.8305105735789	59.591	0.89731	59.591	59.162	60.06	0	-0.17153	4.4441E-06	NaN	32.812	55	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110350	+		39419	19412	26258	26270							0.06642274057185205
NSSIIWQLLP	10	Unmodified	_NSSIIWQLLP_					0	0	0			REV__nc|ENSG00000137817|Q2NL67-2|PARP6	REV__nc|ENSG00000137817|Q2NL67-2|PARP6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	585.829506	1169.64446	-0.76332	-0.00044718	1.6503	0.00096677	0.88694	0.00051959	585.8308311777787	59.948	0.14137	59.934	59.859	60.001	-0.013729	0.17153	-8.826E-05	NaN	32.812	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18046	+		39420	19412	26258	26270							0.06642274057185205
NSSIKVKV	8	Unmodified	_NSSIKVKV_					0	0	0			REV__ENSG00000167098|ENST00000356173|SUN5	REV__ENSG00000167098|ENST00000356173|SUN5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.262939453125	2	437.77146	873.528367	0.21309	9.3283E-05	-0.66051	-0.00028915	-0.44742	-0.00019587	437.77115912301207	42.404	1.0768	42.469	42.159	43.235	0.065037					38	30	2	0	0	0	0.4196	1	2937	2937		20.947	0	1	55175	+		39421	21354	26259	26271	44828	44828					0.0865437527713766
NSSLLLTK	8	Unmodified	_NSSLLLTK_					0	0	0		nc|ENSG00000012048|P38398-8|BRCA1;chr17:43124115-43125277|50|10.88|0.46|4.57|-|ENST00000652672|BRCA1,BRCA1;chr17:43094860-43099775|54|10.19|0.46|4.45|-|ENST00000634433|BRCA1,BRCA1;nc|ENSG00000012048|P38398-4|BRCA1;ENSG00000012048|ENST00000357654|BRCA1;nc|ENSG00000012048|P38398-7|BRCA1	nc|ENSG00000012048|P38398-8|BRCA1	nc|ENSG00000012048|P38398-8|BRCA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2638244628906	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.87071	1	2572	2572		29.17	1.2878	1	3507500			39422	228	26260	26272	44829	44829					0.07010669040221273
NSSLLLTK	8	Unmodified	_NSSLLLTK_					0	0	0		nc|ENSG00000012048|P38398-8|BRCA1;chr17:43124115-43125277|50|10.88|0.46|4.57|-|ENST00000652672|BRCA1,BRCA1;chr17:43094860-43099775|54|10.19|0.46|4.45|-|ENST00000634433|BRCA1,BRCA1;nc|ENSG00000012048|P38398-4|BRCA1;ENSG00000012048|ENST00000357654|BRCA1;nc|ENSG00000012048|P38398-7|BRCA1	nc|ENSG00000012048|P38398-8|BRCA1	nc|ENSG00000012048|P38398-8|BRCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2624206542969	2	438.263468	874.512382	0.037237	1.632E-05	-0.30418	-0.00013331	-0.26694	-0.00011699	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.83831	1	2168	2168		23.523	5.1983	1	10667000			39423	228	26260	26272	44830	44830					0.07010669040221273
NSSLTVDVEWY	11	Unmodified	_NSSLTVDVEWY_					0	0	0			REV__ENSG00000204450|ENST00000533122|TRIM64	REV__ENSG00000204450|ENST00000533122|TRIM64	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.1903076171875	3	438.206709	1311.5983	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.162	1	66.714	66.214	67.214	0.5526								0	0	0	0.56276	1	7231	7231		33.039	5.9921	1		+		39424	23073	26261	26273	44831	44831					-0.04503835635546238
NSSNYKKVD	9	Unmodified	_NSSNYKKVD_					0	0	0		ENSG00000162669|ENST00000370425|HFM1	ENSG00000162669|ENST00000370425|HFM1	ENSG00000162669|ENST00000370425|HFM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7793579101562	2	527.76182	1053.50909	-0.4161	-0.0002196	3.526	0.0018609	3.1099	0.0016413	528.2652550946618	59.852	0.59916	60.406	60.119	60.718	0.55323					18	15	2	0	0	0	0.20789	1	6345	6345		40.058	0	1	230130			39425	5715	26262	26274	44832	44832					-0.015526258044246788
NSSRQRAF	8	Unmodified	_NSSRQRAF_					0	0	0		nc|ENSG00000167210|Q8IVV2|LOXHD1;ENSG00000167210|ENST00000642948|LOXHD1;nc|ENSG00000167210|Q8IVV2-4|LOXHD1;nc|ENSG00000167210|Q8IVV2-5|LOXHD1;nc|ENSG00000167210|Q8IVV2-3|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7287292480469	2	483.249215	964.483876	-0.69316	-0.00033497	3.1758	0.0015347	2.4826	0.0011997	483.2506468289956	72.12	0.87261	72.506	72.251	73.124	0.38581					28	20	3	0	0	0	0.4196	1	8069	8069		47.916	5.5195	1	159020			39426	6278	26263	26275	44833	44833					0.00021364183669447812
NSSSAKKLLK	10	Unmodified	_NSSSAKKLLK_					0	0	0			REV__ENST00000447600.1_1_1:11159921-11162000:+|nuORF	REV__ENST00000447600.1_1_1:11159921-11162000:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267211914062	2	538.327131	1074.63971	3.5631	0.0019181	-3.0668	-0.0016509	0.49637	0.00026721	538.3254567289116	104.65	1.3425	104.61	103.89	105.23	-0.04039					91	31	4	0	0	0	0.86272	1	11568	11568		24.519	1.9395	1	777430	+		39427	26822	26264	26276	44834	44834					0.10537389914406958
NSSTEDKG	8	Unmodified	_NSSTEDKG_					0	0	0		nc|ENSG00000100207|Q9UGU0-2|TCF20;ENSG00000100207|ENST00000677622|TCF20	nc|ENSG00000100207|Q9UGU0-2|TCF20	nc|ENSG00000100207|Q9UGU0-2|TCF20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1832275390625	2	419.182872	836.35119	1.8507	0.00077578	-0.63819	-0.00026752	1.2125	0.00050826	419.1825078402894	95.161	1.5217	95.589	94.841	96.362	0.42728					64	36	2	0	0	0	0.9283	1	11378	11378		49.442	10.635	1	611440			39428	1808	26265	26277	44835	44835					-0.07353125063650623
NSSTLTPTI	9	Unmodified	_NSSTLTPTI_					0	0	0			REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.24859619140625	2	467.248015	932.481476	-0.67201	-0.000314	0.6713	0.00031367	-0.00070621	-3.2997E-07	467.2481870447073	64.176	0.81422	64.563	64.178	64.992	0.3868					42	18	3	0	0	0	0.67345	1	6917	6917		42.396	0	1	277190	+		39429	20516	26266	26278	44836	44836					0.012534709353303697
NSSVIVRR	8	Unmodified	_NSSVIVRR_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;nc|ENSG00000122257|Q7Z6E9-3|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7770690917969	2	465.777608	929.540663	-0.11871	-5.5291E-05	0.041983	1.9555E-05	-0.076723	-3.5736E-05	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.82658	1	7948	7948		21.96	0	1	1083800			39430	3217	26267	26279	44837	44837					0.07307411740180214
NSSVIVRR	8	Unmodified	_NSSVIVRR_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;nc|ENSG00000122257|Q7Z6E9-3|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774353027344	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.835	1	79.779	79.279	80.279	-0.056503								0	0	0	0.29245	1	8004	8004		30.504	0	1				39431	3217	26267	26279	44838	44838					0.07307411740180214
NSSVIVRR	8	Unmodified	_NSSVIVRR_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;nc|ENSG00000122257|Q7Z6E9-3|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7773742675781	2	465.777608	929.540663	-1.5315	-0.00071332	1.4551	0.00067775	-0.076382	-3.5577E-05	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.87064	1	7956	7956		29.15	0.89528	1	991370			39432	3217	26267	26279	44839	44839					0.07307411740180214
NSSVIVRR	8	Unmodified	_NSSVIVRR_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;nc|ENSG00000122257|Q7Z6E9-3|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.778076171875	2	465.777608	929.540663	-0.69238	-0.0003225	0.76957	0.00035845	0.077191	3.5954E-05	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.87479	1	9443	9443		30.504	1.3541	1	927810			39433	3217	26267	26279	44840	44840					0.07307411740180214
NSSYKGSPPNY	11	Unmodified	_NSSYKGSPPNY_					0	0	0			REV__nc|ENSG00000166181|Q9BZZ5-5|API5	REV__nc|ENSG00000166181|Q9BZZ5-5|API5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	607.2789916992188	2	607.277835	1212.54112	-1.7006	-0.0010327	3.861	0.0023447	2.1605	0.001312	607.2799465144572	42.66	0.54043	43.357	43.091	43.632	0.69754					28	12	3	0	0	0	0.50531	1	3819	3819		51.528	7.1506	1	1344500	+		39434	21263	26268	26280	44841	44841					-0.05665258121280203
NSSYSYSYSF	10	Unmodified	_NSSYSYSYSF_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.7416381835938	2	602.743293	1203.47203	1.2536	0.00075561	-3.5856	-0.0021612	-2.3319	-0.0014056	602.740947907369	85.029	0.95467	84.957	84.498	85.453	-0.07196					58	21	4	0	0	0	0.64457	1	8738	8738		47.657	1.7054	1	406200			39435	1742	26269	26281	44842	44842					-0.12156342140860943
NSTIGSFL	8	Unmodified	_NSTIGSFL_					0	0	0		ENST00000468090.5_1_21:45178713-45178851:+|nuORF	ENST00000468090.5_1_21:45178713-45178851:+|nuORF	ENST00000468090.5_1_21:45178713-45178851:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.718017578125	2	419.718893	837.423233	-1.8624	-0.0007817	1.6945	0.0007112	-0.16797	-7.0499E-05	419.71948576487165	43.657	1.1512	43.665	43.227	44.378	0.0082664					62	27	3	0	0	0	0.84341	1	3066	3066		24.203	0	1	963550			39436	12169	26270	26282	44843	44843					-0.0019816591926655747
NSTKDWLFL	9	Unmodified	_NSTKDWLFL_					0	0	0			REV__nc|ENSG00000132704|Q96LA5-5|FCRL2	REV__nc|ENSG00000132704|Q96LA5-5|FCRL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3612060546875	2	562.292756	1122.57096	-1.0474	-0.00058895	-3.6034	-0.0020262	-4.6508	-0.0026151	562.290519361506	43.997	0.414	44.771	44.582	44.996	0.77379					20	9	3	0	0	0	0.20789	1	4006	4006		27.882	2.3082	1	360170	+		39437	19024	26271	26283	44844	44844					0.014577256147049411
NSTMKILTL	9	Unmodified	_NSTMKILTL_					0	0	0		nc|ENSG00000182256|Q99928-2|GABRG3;ENSG00000182256|ENST00000615808|GABRG3	nc|ENSG00000182256|Q99928-2|GABRG3	nc|ENSG00000182256|Q99928-2|GABRG3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8096008300781	2	510.791535	1019.56852	-0.72647	-0.00037108	3.3863	0.0017297	2.6598	0.0013586	510.7920384917713	59.3	0.20147	59.69	59.525	59.727	0.39077					5	4	2	0	0	0	0.20789	1	6240	6240		25.574	0	1	33833			39438	7441	26272	26284	44845	44845					0.05951553885404337
NSTVVKHR	8	Unmodified	_NSTVVKHR_					0	0	0			REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7691650390625	2	470.769783	939.525013	-0.6824	-0.00032125	-0.88888	-0.00041846	-1.5713	-0.00073971	470.7692716154138	50.88	1.3539	50.856	50.427	51.781	-0.02343					91	38	3	0	0	0	0.87922	1	4470	4470		31.955	1.4512	1	670480	+		39439	16637	26273	26285	44846	44846					0.05283125223149909
NSVCFDVQT	9	Unmodified	_NSVCFDVQT_					0	0	0			REV__ENSG00000179626|ENST00000641569|OR6C4	REV__ENSG00000179626|ENST00000641569|OR6C4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.2523193359375	2	506.723849	1011.43315	-0.34039	-0.00017248	-0.11942	-6.0514E-05	-0.45981	-0.000233	506.72375493022986	49.282	0.49304	49.741	49.499	49.992	0.45983					15	11	2	0	0	0	0.20789	1	4820	4820		19.997	7.7899	1	140810	+		39440	22347	26274	26286	44847	44847					-0.07211345976213579
NSVCKRTRL	9	Unmodified	_NSVCKRTRL_					0	0	0			REV__ENSG00000157219|ENST00000287907|HTR5A	REV__ENSG00000157219|ENST00000287907|HTR5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.805908203125	2	538.8033	1075.59205	2.2674	0.0012217	4.0273	0.0021699	6.2947	0.0033916	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.71772	1	9644	9644		39.253	2.8061	1	835060	+		39441	20536	26275	26287	44848	44848					0.05727412442570312
NSVDESSED	9	Unmodified	_NSVDESSED_					0	0	0		ENSG00000107890|ENST00000376087|ANKRD26	ENSG00000107890|ENST00000376087|ANKRD26	ENSG00000107890|ENST00000376087|ANKRD26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.68829345703125	2	491.185808	980.357064	0.46609	0.00022894	-1.0109	-0.00049654	-0.54482	-0.00026761	491.1851925944041	64.496	1.2333	64.62	63.877	65.111	0.12396					67	44	2	0	0	0	0.7932	1	5727	5727		26.693	4.733	1	159550			39442	2378	26276	26288	44849	44849					-0.13390071342644205
NSVDESSED	9	Unmodified	_NSVDESSED_					0	0	0		ENSG00000107890|ENST00000376087|ANKRD26	ENSG00000107890|ENST00000376087|ANKRD26	ENSG00000107890|ENST00000376087|ANKRD26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.1876525878906	2	491.185808	980.357064	-0.80776	-0.00039676	0.13662	6.7105E-05	-0.67114	-0.00032966	491.1857359582236	64.612	1.4263	64.649	63.688	65.115	0.037849					82	51	2	0	0	0	0.78983	1	5679	5679		27.882	1.1893	1	104970			39443	2378	26276	26288	44850	44850					-0.13390071342644205
NSVEKIFIPG	10	Unmodified	_NSVEKIFIPG_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3055419921875	2	552.308406	1102.60226	0.26261	0.00014504	-3.8233	-0.0021116	-3.5607	-0.0019666	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.64457	1	9518	9518		47.657	1.6851	1	1950800	+		39444	20437	26277	26289	44851	44851					0.05506298648788288
NSVIIVDKNGR	11	Unmodified	_NSVIIVDKNGR_					0	0	0		ENSG00000072274|ENST00000360110|TFRC;chr3:196074125-196077064|44|10.11|0.63|4.01|-|ENST00000420415|TFRC,TFRC	ENSG00000072274|ENST00000360110|TFRC	ENSG00000072274|ENST00000360110|TFRC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.56402587890625	3	405.566571	1213.67788	-0.18878	-7.6562E-05	-4.1815	-0.0016959	-4.3703	-0.0017724	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.74002	1	5891	5891		24.276	2.5902	1	257140			39445	399	26278	26290	44852	44852					0.0795927582908007
NSVKDSPRL	9	Unmodified	_NSVKDSPRL_					0	0	0			REV__nc|ENSG00000163576|Q8N7U6-3|EFHB	REV__nc|ENSG00000163576|Q8N7U6-3|EFHB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.280029296875	2	508.28018	1014.54581	-0.39653	-0.00020155	0.29161	0.00014822	-0.10492	-5.3328E-05	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.75725	1	8760	8760		36.447	0	1	2080300	+		39446	20938	26279	26291	44853	44853					0.03911670812135526
NSVKDSPRL	9	Unmodified	_NSVKDSPRL_					0	0	0			REV__nc|ENSG00000163576|Q8N7U6-3|EFHB	REV__nc|ENSG00000163576|Q8N7U6-3|EFHB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2801818847656	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.71772	1	8781	8781		39.253	5.0803	1	1954800	+		39447	20938	26279	26291	44854	44854					0.03911670812135526
NSVKDSPRL	9	Unmodified	_NSVKDSPRL_					0	0	0			REV__nc|ENSG00000163576|Q8N7U6-3|EFHB	REV__nc|ENSG00000163576|Q8N7U6-3|EFHB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2797546386719	2	508.28018	1014.54581	0.65224	0.00033152	-0.58773	-0.00029873	0.064515	3.2792E-05	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.39367	2	10360	10336;10360		58.23	1.7961	1	1819500	+		39448	20938	26279	26291	44855;44856	44856					0.03911670812135526
NSVKDSPRL	9	Unmodified	_NSVKDSPRL_					0	0	0			REV__nc|ENSG00000163576|Q8N7U6-3|EFHB	REV__nc|ENSG00000163576|Q8N7U6-3|EFHB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2799072265625	2	508.28018	1014.54581	-0.38512	-0.00019575	0.39831	0.00020245	0.013195	6.7066E-06	508.28029410514995	88.272	2.579	88.735	87.686	90.265	0.46312					198	63	4	0	0	0	0.54908	3	10400	10400;10429;10541		49.536	6.6718	1	2008000	+		39449	20938	26279	26291	44857;44858;44859	44857					0.03911670812135526
NSVKGIHF	8	Unmodified	_NSVKGIHF_					0	0	0		nc|ENSG00000115419|O94925-3|GLS;ENSG00000115419|ENST00000320717|GLS	nc|ENSG00000115419|O94925-3|GLS	nc|ENSG00000115419|O94925-3|GLS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.2490234375	2	451.248152	900.481751	-0.97999	-0.00044222	2.5923	0.0011698	1.6123	0.00072755	451.24921015554173	65.724	1.4568	65.769	65.089	66.546	0.045113					104	74	2	0	0	0	0.84341	1	5819	5819		24.203	2.2429	1	906430			39450	2842	26280	26292	44860	44860					0.02752935445857929
NSVKKSRVD	9	Unmodified	_NSVKKSRVD_					0	0	0		ENST00000354670.8_1_15:40383595-40383652:-|nuORF	ENST00000354670.8_1_15:40383595-40383652:-|nuORF	ENST00000354670.8_1_15:40383595-40383652:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7929077148438	2	516.793455	1031.57236	-0.27573	-0.0001425	0.094124	4.8643E-05	-0.18161	-9.3853E-05	516.7933490368572	86.056	2.7275	86.241	84.67	87.398	0.18523					138	63	3	0	0	0	0.77244	1	8504	8504		32.812	0	1	324400			39451	10339	26281	26293	44861	44861					0.05783359703491442
NSVKLKNLT	9	Unmodified	_NSVKLKNLT_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.80755615234375	2	508.808574	1015.60259	-0.95319	-0.00048499	-0.53133	-0.00027035	-1.4845	-0.00075534	508.8082107511822	83.728	2.644	83.728	82.933	85.577	0					147	63	5	0	0	0	0.78983	2	7901	7868;7901		27.882	2.1737	1	4920100			39452	1214	26282	26294	44862;44863	44863					0.09541718368666352
NSVKLKNLT	9	Unmodified	_NSVKLKNLT_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.8075866699219	2	508.808574	1015.60259	-0.85493	-0.00043499	-0.55163	-0.00028067	-1.4066	-0.00071567	508.8081854694424	90.498	1.1947	90.498	89.91	91.105	0					75	27	4	0	0	0	0.7932	1	8817	8817		15.642	0	1	968460			39453	1214	26282	26294	44864	44864					0.09541718368666352
NSVKLKNLT	9	Unmodified	_NSVKLKNLT_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.8076171875	2	508.808574	1015.60259	-0.055595	-2.8287E-05	-1.6183	-0.00082341	-1.6739	-0.0008517	508.8077132921667	83.422	2.5883	83.489	82.396	84.985	0.066719					89	59	2	0	0	0	0.78536	1	8296	8296		29.15	2.4566	1	2642300			39454	1214	26282	26294	44865	44865					0.09541718368666352
NSVKLKNLT	9	Unmodified	_NSVKLKNLT_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.8078308105469	2	508.808574	1015.60259	0.84861	0.00043178	-3.1233	-0.0015892	-2.2747	-0.0011574	508.8072597473503	83.541	2.7911	83.472	82.015	84.806	-0.069313					129	64	3	0	0	0	0.77696	1	8543	8543		31.53	4.8369	1	2497800			39455	1214	26282	26294	44866	44866					0.09541718368666352
NSVKLKNLT	9	Unmodified	_NSVKLKNLT_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.8063049316406	2	508.808574	1015.60259	0.33751	0.00017173	-2.0744	-0.0010555	-1.7369	-0.00088377	508.8074006535315	89.921	1.4701	89.969	89.439	90.909	0.048157					61	34	2	0	0	0	0.7932	1	9290	9290		23.523	1.5628	1	1159300			39456	1214	26282	26294	44867	44867					0.09541718368666352
NSVKLKNLT	9	Unmodified	_NSVKLKNLT_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.8074645996094	2	508.808574	1015.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.615	1	83.675	83.175	84.175	0.05925								0	0	0	0.31437	1	8413	8413		25.574	2.0514	1				39457	1214	26282	26294	44868	44868					0.09541718368666352
NSVKLKNLT	9	Unmodified	_NSVKLKNLT_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.80767822265625	2	508.808574	1015.60259	-0.40009	-0.00020357	-1.3872	-0.00070582	-1.7873	-0.00090939	508.80782145253374	83.116	1.7458	83.281	82.603	84.348	0.1651					72	40	2	0	0	0	0.76255	2	8039	8003;8039		35.618	1.4457	1	4136400			39458	1214	26282	26294	44869;44870	44870					0.09541718368666352
NSVKLKNLT	9	Unmodified	_NSVKLKNLT_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.8074645996094	2	508.808574	1015.60259	0.65318	0.00033234	-2.4261	-0.0012344	-1.7729	-0.00090206	508.80731297639136	83.188	1.9706	83.335	82.631	84.602	0.14695					106	45	4	0	0	0	0.78983	1	8033	8033		27.882	1.1893	1	3797600			39459	1214	26282	26294	44871	44871					0.09541718368666352
NSVKLKNLT	9	Unmodified	_NSVKLKNLT_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.8083190917969	2	508.808574	1015.60259	-1.4188	-0.00072192	-0.25381	-0.00012914	-1.6726	-0.00085106	508.8083690833738	83.198	1.9743	83.336	82.638	84.612	0.13811					103	45	4	0	0	0	0.7932	1	8045	8045		25.574	2.9944	1	3643200			39460	1214	26282	26294	44872	44872					0.09541718368666352
NSVKLKNLT	9	Unmodified	_NSVKLKNLT_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.8064880371094	2	508.808574	1015.60259	-1.5863	-0.00080713	-0.23955	-0.00012189	-1.8259	-0.00092901	508.8083574581473	89.656	1.4168	89.832	89.259	90.675	0.1758					59	32	2	0	0	0	0.7932	1	8896	8896		25.574	1.3713	1	1468400			39461	1214	26282	26294	44873	44873					0.09541718368666352
NSVKLKNLT	9	Unmodified	_NSVKLKNLT_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.80743408203125	2	508.808574	1015.60259	-0.31062	-0.00015805	-0.84428	-0.00042958	-1.1549	-0.00058762	508.80800447474485	82.779	1.2447	83.21	82.754	83.998	0.43108					73	29	4	0	0	0	0.7932	1	9590	9590		25.574	0	1	3073800			39462	1214	26282	26294	44874	44874					0.09541718368666352
NSVKVTNEP	9	Unmodified	_NSVKVTNEP_					0	0	0		ENSG00000115423|ENST00000389394|DNAH6;nc|ENSG00000115423|Q9C0G6-2|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.26422119140625	2	494.258914	986.503274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.954	1	60.345	59.845	60.845	0.39077								0	0	0	0.27769	1	6339	6339		64.207	2.0999	1				39463	2844	26283	26295	44875	44875					0.009482756839133799
NSVLCNTQLP	10	Unmodified	_NSVLCNTQLP_					0	0	0		chr15:75414311-75430187|45|14.18|0.37|5.26|-|2|SIN3A,SIN3A|1	chr15:75414311-75430187|45|14.18|0.37|5.26|-|2|SIN3A,SIN3A|1	chr15:75414311-75430187|45|14.18|0.37|5.26|-|2|SIN3A,SIN3A|1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.7730712890625	2	544.773874	1087.53319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.796	1	50.804	50.304	51.304	0.0077438								0	0	0	0.45132	1	4351	4351		36.447	9.7538	1				39464	193	26284	26296	44876	44876					-0.00707108642404819
NSVLKGAVTK	10	Unmodified	_NSVLKGAVTK_					0	0	0		ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35455862-35480681:-|nuORF;nc|ENSG00000163867|O95789-1|ZMYM6	ENSG00000163867|ENST00000357182|ZMYM6	ENSG00000163867|ENST00000357182|ZMYM6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.8077392578125	2	508.808574	1015.60259	-0.055595	-2.8287E-05	-1.6183	-0.00082341	-1.6739	-0.0008517	508.8077132921667	83.422	2.5883	83.489	82.396	84.985	0.066719					89	59	2	0	0	0	0.86272	1	8308	8308		24.519	0.31644	1	2642300			39465	5873	26285	26297	44877	44877					0.09541718368654983
NSVLKGAVTK	10	Unmodified	_NSVLKGAVTK_					0	0	0		ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35455862-35480681:-|nuORF;nc|ENSG00000163867|O95789-1|ZMYM6	ENSG00000163867|ENST00000357182|ZMYM6	ENSG00000163867|ENST00000357182|ZMYM6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.8077697753906	2	508.808574	1015.60259	-0.40009	-0.00020357	-1.3872	-0.00070582	-1.7873	-0.00090939	508.80782145253374	83.116	1.7458	83.281	82.603	84.348	0.1651					72	40	2	0	0	0	0.86272	1	8052	8052		24.519	0	1	4136400			39466	5873	26285	26297	44878	44878					0.09541718368654983
NSVLLPLL	8	Unmodified	_NSVLLPLL_					0	0	0		ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7798767089844	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.884	1	2894	2894		33.516	6.7195	1	2537300			39467	3698	26286	26298	44879	44879					0.10388447425293634
NSVPLKEH	8	Unmodified	_NSVPLKEH_					0	0	0			REV__ENST00000337908.4_2_11:60075647-60075812:+|nuORF	REV__ENST00000337908.4_2_11:60075647-60075812:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.27410888671875	2	462.250892	922.48723	-0.44438	-0.00020541	2.1743	0.0010051	1.7299	0.00079964	462.25407834144767	51.411	0.79581	51.846	51.576	52.372	0.43505					39	18	3	0	0	0	0.4196	1	5132	5132		49.442	20.292	1	874160	+		39468	25208	26287	26299	44880	44880					0.022886142376592034
NSVPLKEH	8	Unmodified	_NSVPLKEH_					0	0	0			REV__ENST00000337908.4_2_11:60075647-60075812:+|nuORF	REV__ENST00000337908.4_2_11:60075647-60075812:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	462.250892	922.48723	-0.44432	-0.00020539	8.4661	0.0039134	8.0217	0.0037081	462.25467981739354	51.617	0.36551	51.532	51.308	51.674	-0.084538	-0.23486	0.0029908	NaN	40.778	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56113	+		39469	25208	26287	26299							0.022886142376592034
NSVRSILEV	9	Unmodified	_NSVRSILEV_					0	0	0			REV__nc|ENSG00000175662|Q6ZVM7-3|TOM1L2	REV__nc|ENSG00000175662|Q6ZVM7-3|TOM1L2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.8075256347656	2	508.790381	1015.56621	0.65433	0.00033292	-0.79627	-0.00040514	-0.14194	-7.2219E-05	509.29286828924876	83.357	0.2177	83.504	83.351	83.569	0.14694					5	4	2	0	0	0	0.20789	1	8080	8080		21.96	3.6355	1	22092	+		39470	22079	26288	26300	44881	44881					0.05904841471965483
NSVTQPPG	8	Unmodified	_NSVTQPPG_					0	0	0			REV__ENST00000531050.5_1_6:128321419-128718758:-|nuORF	REV__ENST00000531050.5_1_6:128321419-128718758:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.20111083984375	2	400.200867	798.387182	-1.8507	-0.00074064	-0.79596	-0.00031855	-2.6466	-0.0010592	400.2020327655788	68.039	1.0961	68.174	67.814	68.91	0.13522					55	41	2	0	0	0	0.9295	1	6107	6107		55.504	0	1	183560	+		39471	20319	26289	26301	44882	44882					-0.02007623096142197
NSVVGLDGL	9	Unmodified	_NSVVGLDGL_					0	0	0			REV__ENST00000493246.5_2_7:7681157-7712940:+|nuORF	REV__ENST00000493246.5_2_7:7681157-7712940:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2339782714844	2	437.23745	872.460347	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.188	1	62.155	61.655	62.655	-0.033173								0	0	0	0.30778	1	5889	5889		27.882	0	1		+		39472	27689	26290	26302	44883	44883					0.019015056264720442
NSVVIIHGATG	11	Unmodified	_NSVVIIHGATG_					0	0	0		nc|ENSG00000156414|Q8NDG6-2|TDRD9;ENSG00000156414|ENST00000409874|TDRD9	nc|ENSG00000156414|Q8NDG6-2|TDRD9	nc|ENSG00000156414|Q8NDG6-2|TDRD9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.2936401367188	2	534.29583	1066.57711	-0.74259	-0.00039676	-1.2826	-0.00068527	-2.0252	-0.001082	534.2951504671357	88.691	3.5877	88.691	87.598	91.185	0					140	83	2	0	0	0	0.67778	1	8505	8505		35.152	0.97948	1	382360			39473	5377	26291	26303	44884	44884					0.04648243846236255
NSVVQGMILMF	11	Unmodified	_NSVVQGMILMF_					0	0	0		nc|nan|Q8ND61-2|C3orf20;ENSG00000131379|ENST00000253697|C3orf20	nc|nan|Q8ND61-2|C3orf20	nc|nan|Q8ND61-2|C3orf20	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.54522705078125	3	413.547243	1237.6199	-1.677	-0.00069351	-2.9173	-0.0012064	-4.5942	-0.0018999	413.5458900803168	54.051	0.86453	54.051	53.649	54.514	0					63	24	4	0	0	0	0.58516	1	4517	4517		45.908	2.2573	1	371350			39474	3727	26292	26304	44885	44885					0.010595545878004486
NSWFNLFVI	9	Unmodified	_NSWFNLFVI_					0	0	0		nc|ENSG00000020922|P49959-2|MRE11;ENSG00000020922|ENST00000323929|MRE11;nc|ENSG00000020922|P49959-3|MRE11	nc|ENSG00000020922|P49959-2|MRE11	nc|ENSG00000020922|P49959-2|MRE11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.2960815429688	2	570.297842	1138.58113	-1.1333	-0.00064634	-2.7684	-0.0015788	-3.9017	-0.0022251	570.2960554675205	62.126	0.61243	62.116	61.801	62.413	-0.0094185					53	24	3	0	0	0	0.31972	1	5782	5782		63.306	4.5243	1	798940			39475	845	26293	26305	44886	44886					0.017383333399493495
NSWFNLFVI	9	Unmodified	_NSWFNLFVI_					0	0	0		nc|ENSG00000020922|P49959-2|MRE11;ENSG00000020922|ENST00000323929|MRE11;nc|ENSG00000020922|P49959-3|MRE11	nc|ENSG00000020922|P49959-2|MRE11	nc|ENSG00000020922|P49959-2|MRE11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.29541015625	2	570.297842	1138.58113	-0.19522	-0.00011133	-3.9593	-0.002258	-4.1545	-0.0023693	570.2954447589152	61.934	0.66319	61.964	61.679	62.342	0.029575					66	27	3	0	0	0	0.28163	2	5794	5785;5794		66.429	6.311	1	775280			39476	845	26293	26305	44887;44888	44888					0.017383333399493495
NSWFNLFVI	9	Unmodified	_NSWFNLFVI_					0	0	0		nc|ENSG00000020922|P49959-2|MRE11;ENSG00000020922|ENST00000323929|MRE11;nc|ENSG00000020922|P49959-3|MRE11	nc|ENSG00000020922|P49959-2|MRE11	nc|ENSG00000020922|P49959-2|MRE11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.2951049804688	2	570.297842	1138.58113	0.47185	0.0002691	-4.3423	-0.0024764	-3.8704	-0.0022073	570.2951038965308	61.928	0.56001	62.035	61.772	62.332	0.10743					50	24	3	0	0	0	0.25483	1	5378	5378		68.787	2.3575	1	602680			39477	845	26293	26305	44889	44889					0.017383333399493495
NSYNYYVWQG	10	Unmodified	_NSYNYYVWQG_					0	0	0			REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	647.2791137695312	2	647.280377	1292.5462	-1.0404	-0.00067345	0.88975	0.00057592	-0.15069	-9.7537E-05	647.2810878546856	58.803	1.0008	59.195	58.651	59.652	0.39209					69	23	4	0	0	0	0.8651	1	6118	6118		25.574	2.0514	1	2569500	+		39478	17416	26294	26306	44890	44890					-0.08836954258663354
NSYPFLRSV	9	Unmodified	_NSYPFLRSV_					0	0	0			REV__nc|ENSG00000163531|O94856-7|NFASC;REV__nc|ENSG00000163531|O94856-6|NFASC	REV__nc|ENSG00000163531|O94856-6|NFASC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.7852783203125	2	541.785099	1081.55564	-0.1772	-9.6005E-05	0.51969	0.00028156	0.34249	0.00018556	541.7852873202811	56.84	2.4261	56.873	56.56	58.986	0.033184					182	81	4	0	0	0	0.36616	1	5270	5270		60.118	8.7828	1	6132200	+		39479	29984;29985	26295	26307	44891	44891					0.01812858817538654
NSYSYSGQG	9	Unmodified	_NSYSYSGQG_					0	0	0			REV__nc|ENSG00000129351|Q12906|ILF3	REV__nc|ENSG00000129351|Q12906|ILF3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.6973876953125	2	481.696146	961.377739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.189	1	67.74	67.24	68.24	0.55071								0	0	0	0.29134	1	7375	7375		34.173	2.2177	1		+		39480	18819	26296	26308	44892	44892					-0.10449436172314108
NSYTLWEL	8	Unmodified	_NSYTLWEL_					0	0	0		ENSG00000204442|ENST00000375915|NALF1	ENSG00000204442|ENST00000375915|NALF1	ENSG00000204442|ENST00000375915|NALF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.250244140625	2	513.250557	1024.48656	-0.28551	-0.00014654	0.14174	7.2748E-05	-0.14377	-7.3788E-05	513.2505615191272	71.126	0.99968	71.511	71	71.999	0.3845					48	23	3	0	0	0	0.90523	1	7922	7922		40.778	0	1	845970			39481	8443	26297	26309	44893	44893					-0.024702252020460946
NTAFLKGG	8	Unmodified	_NTAFLKGG_					0	0	0		nc|ENSG00000131480|O75106-2|AOC2;ENSG00000131480|ENST00000253799|AOC2	nc|ENSG00000131480|O75106-2|AOC2	nc|ENSG00000131480|O75106-2|AOC2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.2327880859375	2	404.221603	806.428653	-1.8199	-0.00073563	2.3894	0.00096584	0.5695	0.0002302	404.22221706433555	84.852	0.56279	85.028	84.876	85.439	0.17561					12	12	2	0	0	0	0.4196	1	8285	8285		24.203	0	1	49794			39482	3735	26298	26310	44894	44894					0.01769557663192245
NTARLAQIA	9	Unmodified	_NTARLAQIA_					0	0	0			REV__nc|ENSG00000058056|Q92995-2|USP13	REV__nc|ENSG00000058056|Q92995-2|USP13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2774963378906	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.69624	1	7778	7778		40.778	1.5253	1	1311100	+		39483	16431	26299	26311	44895	44895					0.06031992020302823
NTARLAQIA	9	Unmodified	_NTARLAQIA_					0	0	0			REV__nc|ENSG00000058056|Q92995-2|USP13	REV__nc|ENSG00000058056|Q92995-2|USP13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2778625488281	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.51592	1	8495	8495		51.193	10.415	1	6441000	+		39484	16431	26299	26311	44896	44896					0.06031992020302823
NTDFGDEFY	9	Unmodified	_NTDFGDEFY_					0	0	0		nc|ENSG00000116044|Q16236-3|NFE2L2;nc|ENSG00000116044|Q16236-2|NFE2L2;ENSG00000116044|ENST00000397062|NFE2L2	nc|ENSG00000116044|Q16236-3|NFE2L2	nc|ENSG00000116044|Q16236-3|NFE2L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.7188110351562	2	554.216911	1106.41927	-0.80132	-0.0004441	0.72055	0.00039934	-0.080773	-4.4766E-05	554.2171564084803	73.085	0.49451	73.125	72.904	73.399	0.040024					27	16	2	0	0	0	0.6204	1	6985	6985		45.972	0.020292	1	80049			39485	2895	26300	26312	44897	44897					-0.12968300203647232
NTDFYQTSY	9	Unmodified	_NTDFYQTSY_					0	0	0		ENST00000522203.5_1_5:143545115-143549519:-|nuORF;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;ENSG00000145817|ENST00000274496|YIPF5;nc|ENSG00000145817|Q969M3-3|YIPF5	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.7377319335938	2	569.738011	1137.46147	-1.1464	-0.00065316	1.1333	0.00064567	-0.013136	-7.4839E-06	569.7385484335523	59.569	0.99936	59.555	59.196	60.195	-0.013729					68	26	4	0	0	0	7.036E-98	6	5476	5454;5464;5476;5488;5498;5508		235.12	138.93	1	1115200			39486	4795	26301	26313	44898;44899;44900;44901;44902;44903	44900					-0.10176324795270375
NTDFYQTSY	9	Unmodified	_NTDFYQTSY_					0	0	0		ENST00000522203.5_1_5:143545115-143549519:-|nuORF;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;ENSG00000145817|ENST00000274496|YIPF5;nc|ENSG00000145817|Q969M3-3|YIPF5	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.7377319335938	2	569.738011	1137.46147	0.21284	0.00012126	-0.24426	-0.00013917	-0.031427	-1.7905E-05	569.7377763254352	59.537	0.91787	59.505	59.148	60.066	-0.031731					63	22	4	0	0	0	8.5644E-29	7	5577	5554;5565;5577;5587;5599;5610;5621		186.41	112.16	1	1394700			39487	4795	26301	26313	44904;44905;44906;44907;44908;44909;44910	44906					-0.10176324795270375
NTDFYQTSY	9	Unmodified	_NTDFYQTSY_					0	0	0		ENST00000522203.5_1_5:143545115-143549519:-|nuORF;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;ENSG00000145817|ENST00000274496|YIPF5;nc|ENSG00000145817|Q969M3-3|YIPF5	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.738037109375	2	569.738011	1137.46147	-0.2315	-0.00013189	0.16247	9.2565E-05	-0.069028	-3.9328E-05	569.737985127919	59.421	0.8942	59.454	59.135	60.029	0.032825					63	21	4	0	0	0	2.7178E-39	7	5489	5468;5477;5489;5500;5513;5525;5540		199.89	114.98	1	1345500			39488	4795	26301	26313	44911;44912;44913;44914;44915;44916;44917	44913					-0.10176324795270375
NTDFYQTSY	9	Unmodified	_NTDFYQTSY_					0	0	0		ENST00000522203.5_1_5:143545115-143549519:-|nuORF;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;ENSG00000145817|ENST00000274496|YIPF5;nc|ENSG00000145817|Q969M3-3|YIPF5	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.7376708984375	2	569.738011	1137.46147	0.45764	0.00026073	-0.72608	-0.00041367	-0.26844	-0.00015294	569.7377065019502	59.509	0.65848	59.604	59.303	59.962	0.094059					30	18	2	0	0	0	0.15959	3	5100	5090;5100;5111		82.241	30.515	1	253280			39489	4795	26301	26313	44918;44919;44920	44919					-0.10176324795270375
NTDFYQTSY	9	Unmodified	_NTDFYQTSY_					0	0	0		ENST00000522203.5_1_5:143545115-143549519:-|nuORF;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;ENSG00000145817|ENST00000274496|YIPF5;nc|ENSG00000145817|Q969M3-3|YIPF5	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.7381591796875	2	569.738011	1137.46147	0.49785	0.00028364	-0.71496	-0.00040734	-0.21711	-0.00012369	569.7375632765535	59.388	0.55659	59.502	59.284	59.84	0.11396					27	15	3	0	0	0	0.2083	2	5099	5099;5110		72.879	16.803	1	252520			39490	4795	26301	26313	44921;44922	44921					-0.10176324795270375
NTDFYQTSY	9	Unmodified	_NTDFYQTSY_					0	0	0		ENST00000522203.5_1_5:143545115-143549519:-|nuORF;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;ENSG00000145817|ENST00000274496|YIPF5;nc|ENSG00000145817|Q969M3-3|YIPF5	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	ENST00000522203.5_1_5:143545115-143549519:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.2402954101562	2	569.738011	1137.46147	-0.37659	-0.00021456	0.3549	0.0002022	-0.021688	-1.2357E-05	569.7381130969244	59.5	0.54634	59.5	59.258	59.804	0.00051117					29	14	3	0	0	0	0.36616	5	5133	5099;5104;5108;5121;5133		60.118	20.865	1	224400			39491	4795	26301	26313	44923;44924;44925;44926;44927	44927					-0.10176324795270375
NTDHQTQLLY	10	Unmodified	_NTDHQTQLLY_					0	0	0		nc|ENSG00000051180|Q06609-2|RAD51;nc|ENSG00000051180|Q06609-3|RAD51;chr15:40729634-40731055|60|14.32|0.39|5.19|+|ENST00000423169|RAD51,RAD51;ENSG00000051180|ENST00000267868|RAD51;nc|ENSG00000051180|Q06609-4|RAD51	nc|ENSG00000051180|Q06609-2|RAD51	nc|ENSG00000051180|Q06609-2|RAD51	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	616.7989501953125	2	616.798934	1231.58332	-0.63082	-0.00038909	0.41811	0.00025789	-0.21271	-0.0001312	616.7991260346982	45.904	0.72873	45.876	45.54	46.269	-0.028782					34	16	3	0	0	0	0.80179	1	3748	3748		39.253	2.8061	1	355320			39492	185	26302	26314	44928	44928					-0.02321282712887296
NTDIFGLKISN	11	Unmodified	_NTDIFGLKISN_					0	0	0		ENSG00000131050|ENST00000354932|BPIFA2	ENSG00000131050|ENST00000354932|BPIFA2	ENSG00000131050|ENST00000354932|BPIFA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3324584960938	2	611.327328	1220.6401	0.7105	0.00043435	2.4744	0.0015127	3.1849	0.001947	611.3288931083291	78.39	0.975	78.526	78.284	79.259	0.13667					60	27	3	0	0	0	0.60687	1	7385	7385		43.651	3.5926	1	454390			39493	3711	26303	26315	44929	44929					0.03860764843625475
NTDPHSQEY	9	Unmodified	_NTDPHSQEY_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.7252197265625	2	545.725435	1089.43632	0.44741	0.00024416	-0.36178	-0.00019743	0.085627	4.6729E-05	545.7251162655181	23.877	0.82486	23.933	23.534	24.358	0.055487					52	22	3	0	0	0	0.034797	5	817	803;808;817;828;840		115.49	38.72	1	303620			39494	7581	26304	26316	44930;44931;44932;44933;44934	44932					-0.10482379597829095
NTDPHSQEY	9	Unmodified	_NTDPHSQEY_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.72509765625	2	545.725435	1089.43632	0.45105	0.00024615	-0.50595	-0.00027611	-0.054894	-2.9957E-05	545.7250604640319	24.475	1.2664	24.429	23.796	25.062	-0.04598					64	28	4	0	0	0	0.086373	5	958	935;946;958;970;981		95.815	37.033	1	369950			39495	7581	26304	26316	44935;44936;44937;44938;44939	44937					-0.10482379597829095
NTDPHSQEY	9	Unmodified	_NTDPHSQEY_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.7252807617188	2	545.725435	1089.43632	0.90509	0.00049393	-0.97634	-0.00053281	-0.071257	-3.8887E-05	545.7248226608135	24.423	1.0785	24.38	23.989	25.068	-0.043221					56	23	4	0	0	0	1.2037E-08	5	893	870;882;893;905;917		162.25	43.509	1	338150			39496	7581	26304	26316	44940;44941;44942;44943;44944	44942					-0.10482379597829095
NTDPHSQEY	9	Unmodified	_NTDPHSQEY_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.7263793945312	2	545.725435	1089.43632	0.038725	2.1133E-05	0.18263	9.9666E-05	0.22135	0.0001208	545.7253809318471	24.371	0.59245	24.429	24.104	24.696	0.058167					63	27	3	0	0	0	0.24527	2	836	830;836		69.628	6.3214	1	214050			39497	7581	26304	26316	44945;44946	44946					-0.10482379597829095
NTDPHSQEY	9	Unmodified	_NTDPHSQEY_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.7247924804688	2	545.725435	1089.43632	0.15567	8.4953E-05	0.026249	1.4325E-05	0.18192	9.9277E-05	545.7252214865288	24.071	0.65352	24.165	23.825	24.479	0.094501					62	30	3	0	0	0	0.68711	1	811	811		41.427	4.9799	1	210980			39498	7581	26304	26316	44947	44947					-0.10482379597829095
NTDPHSQEY	9	Unmodified	_NTDPHSQEY_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.7207641601562	2	545.725435	1089.43632	0.80332	0.00043839	-0.60784	-0.00033171	0.19548	0.00010668	545.7249802135055	24.196	0.59901	24.21	23.991	24.59	0.013994					59	28	3	0	0	0	0.19437	2	803	803;814		75.043	21.692	1	243340			39499	7581	26304	26316	44948;44949	44948					-0.10482379597829095
NTDRNIDKY	9	Unmodified	_NTDRNIDKY_					0	0	0		nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR;ENSG00000163946|ENST00000683822|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.7781372070312	2	569.778002	1137.54145	-0.21256	-0.00012111	0.33168	0.00018898	0.11912	6.7873E-05	569.7780484096427	24.183	0.84634	24.137	23.831	24.677	-0.04598					35	18	3	0	0	0	0.066118	2	916	906;916		101.25	26.209	1	164760			39500	5890	26305	26317	44950;44951	44951					-0.02181838401429559
NTDRNIDKY	9	Unmodified	_NTDRNIDKY_					0	0	0		nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR;ENSG00000163946|ENST00000683822|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.7781372070312	2	569.778002	1137.54145	1.1818	0.00067335	-1.1004	-0.00062697	0.081414	4.6388E-05	569.7772768590696	24.189	0.77201	24.146	23.852	24.624	-0.043221					44	17	3	0	0	0	0.28163	3	864	844;854;864		66.429	4.9061	1	163200			39501	5890	26305	26317	44952;44953;44954	44954					-0.02181838401429559
NTDRNIDKY	9	Unmodified	_NTDRNIDKY_					0	0	0		nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR;ENSG00000163946|ENST00000683822|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	569.778002	1137.54145	-0.34656	-0.00019746	0.47261	0.00026928	0.12605	7.1818E-05	569.7780779655194	23.853	0.60036	23.908	23.63	24.23	0.055487	-0.12967	0.00073244	NaN	101.25	40	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132980			39502	5890	26305	26317							-0.02181838401429559
NTDRNIDKY	9	Unmodified	_NTDRNIDKY_					0	0	0		nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR;ENSG00000163946|ENST00000683822|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	569.778002	1137.54145	0.89146	0.00050793	-1.071	-0.00061023	-0.17955	-0.0001023	569.777437117779	23.958	0.47312	23.96	23.691	24.164	0.0018959	-0.077696	-0.0010266	NaN	101.25	31	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96231			39503	5890	26305	26317							-0.02181838401429559
NTDSPLRY	8	Unmodified	_NTDSPLRY_					0	0	0		ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2;ENSG00000168028|ENST00000301821|RPSA	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.2373962402344	2	483.237981	964.461409	0.20376	9.8466E-05	-1.4564	-0.00070381	-1.2527	-0.00060535	483.2373041407146	39.94	3.2908	39.91	37.946	41.237	-0.030273					195	83	5	0	0	0	3.5208E-31	9	2818	2773;2785;2794;2806;2818;2828;2840;2853;2865		190.52	78.87	1	13973000			39504	6358	26306	26318	44955;44956;44957;44958;44959;44960;44961;44962;44963	44959					-0.022242800046228695
NTDSPLRY	8	Unmodified	_NTDSPLRY_					0	0	0		ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2;ENSG00000168028|ENST00000301821|RPSA	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.2373046875	2	483.237981	964.461409	-1.266	-0.0006118	0.21896	0.00010581	-1.0471	-0.00050599	483.23812896039357	39.855	2.2831	39.812	39.326	41.609	-0.043694					145	58	5	0	0	0	5.2637999999999995E-53	11	2929	2859;2869;2881;2893;2905;2917;2929;2942;2954;2975;3000		211.39	75.563	1	15595000			39505	6358	26306	26318	44964;44965;44966;44967;44968;44969;44970;44971;44972;44973;44974	44970					-0.022242800046228695
NTDSPLRY	8	Unmodified	_NTDSPLRY_					0	0	0		ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2;ENSG00000168028|ENST00000301821|RPSA	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.23760986328125	2	483.237981	964.461409	-2.897	-0.0013999	1.8168	0.00087797	-1.0802	-0.00052197	483.2388892038537	39.824	3.0185	39.834	38.49	41.509	0.0092812					177	74	5	0	0	0	8.1559E-41	10	2801	2791;2801;2813;2825;2837;2849;2862;2873;2884;2896		195.81	60.305	1	15505000			39506	6358	26306	26318	44975;44976;44977;44978;44979;44980;44981;44982;44983;44984	44976					-0.022242800046228695
NTDSPLRY	8	Unmodified	_NTDSPLRY_					0	0	0		ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2;ENSG00000168028|ENST00000301821|RPSA	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.2376708984375	2	483.237981	964.461409	-0.85678	-0.00041403	0.35922	0.00017359	-0.49756	-0.00024044	483.23811506200286	39.88	1.89	39.886	38.911	40.801	0.0065002					125	55	5	0	0	0	1.956E-22	7	2476	2454;2465;2476;2488;2499;2511;2525		176.41	68.323	1	5941200			39507	6358	26306	26318	44985;44986;44987;44988;44989;44990;44991	44987					-0.022242800046228695
NTDSPLRY	8	Unmodified	_NTDSPLRY_					0	0	0		ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2;ENSG00000168028|ENST00000301821|RPSA	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.23779296875	2	483.237981	964.461409	0.23608	0.00011409	-0.65269	-0.00031541	-0.41661	-0.00020132	483.23762713862635	39.707	1.1662	39.796	39.365	40.531	0.088375					94	32	4	0	0	0	9.3815E-23	7	2452	2432;2443;2452;2463;2475;2489;2501		180.87	72.782	1	6255700			39508	6358	26306	26318	44992;44993;44994;44995;44996;44997;44998	44994					-0.022242800046228695
NTDSPLRY	8	Unmodified	_NTDSPLRY_					0	0	0		ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2;ENSG00000168028|ENST00000301821|RPSA	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.2375183105469	2	483.237981	964.461409	0.044637	2.1571E-05	-0.49333	-0.00023839	-0.44869	-0.00021682	483.237713489892	39.765	1.2614	39.717	39.196	40.457	-0.04789					96	37	4	0	0	0	8.1745E-31	7	2486	2442;2453;2464;2475;2486;2499;2510		185.55	64.022	1	5530900			39509	6358	26306	26318	44999;45000;45001;45002;45003;45004;45005	45003					-0.022242800046228695
NTDSPLRY	8	Unmodified	_NTDSPLRY_					0	0	0		ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2;ENSG00000168028|ENST00000301821|RPSA	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	483.237981	964.461409	-1.0811	-0.00052242	0.18268	8.8279E-05	-0.8984	-0.00043414	483.2381164177131	39.679	0.50008	40.047	39.813	40.313	0.36797	0.16342	0.00028892	NaN	211.39	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95282			39510	6358	26306	26318							-0.022242800046228695
NTDSPLRY	8	Unmodified	_NTDSPLRY_					0	0	0		ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2;ENSG00000168028|ENST00000301821|RPSA	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	ENST00000453374.2_1_1:160236508-160236577:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	483.237981	964.461409	-1.66	-0.00080217	4.6435	0.0022439	2.9835	0.0014417	483.23870242767055	39.514	0.78017	40.068	39.658	40.439	0.5545	0.18472	0.0046002	NaN	211.39	34	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80483			39511	6358	26306	26318							-0.022242800046228695
NTEEAIQLD	9	Unmodified	_NTEEAIQLD_					0	0	0			REV__ENSG00000100154|ENST00000397906|TTC28	REV__ENSG00000100154|ENST00000397906|TTC28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7479858398438	2	516.745836	1031.47712	-0.62916	-0.00032512	4.136	0.0021373	3.5069	0.0018122	516.7478941673756	65.22	0.5148	65.247	64.92	65.435	0.027138					56	22	3	0	0	0	0.75725	1	6182	6182		36.447	2.2742	1	442420	+		39512	17144	26307	26319	45006	45006					-0.03736038278225351
NTEEEGLKY	9	Unmodified	_NTEEEGLKY_					0	0	0		nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;ENSG00000029363|ENST00000531224|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.7537841796875	2	541.753661	1081.49277	-0.069565	-3.7687E-05	-0.13699	-7.4216E-05	-0.20656	-0.0001119	541.7534781278493	37.999	1.0169	37.971	37.569	38.586	-0.027843					62	23	4	0	0	0	0.0081198	3	2534	2534;2545;2558		134.77	30.019	1	1226400			39513	878	26308	26320	45007;45008;45009	45007					-0.044717517611843505
NTEEEGLKY	9	Unmodified	_NTEEEGLKY_					0	0	0		nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;ENSG00000029363|ENST00000531224|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7535400390625	2	541.753661	1081.49277	-0.1908	-0.00010337	0.0077055	4.1745E-06	-0.18309	-9.9192E-05	541.7535508782549	37.928	0.92318	37.878	37.584	38.507	-0.050369					58	20	4	0	0	0	0.002448	4	2622	2622;2632;2645;2660		141.52	42.145	1	1322100			39514	878	26308	26320	45010;45011;45012;45013	45010					-0.044717517611843505
NTEEEGLKY	9	Unmodified	_NTEEEGLKY_					0	0	0		nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;ENSG00000029363|ENST00000531224|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.7535400390625	2	541.753661	1081.49277	-1.1055	-0.00059889	0.92948	0.00050355	-0.176	-9.5347E-05	541.7540647842854	37.888	1.3427	37.899	37.42	38.762	0.011173					70	30	4	0	0	0	2.5939E-13	3	2567	2556;2567;2581		167.23	54.743	1	1285400			39515	878	26308	26320	45014;45015;45016	45015					-0.044717517611843505
NTEEEGLKY	9	Unmodified	_NTEEEGLKY_					0	0	0		nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;ENSG00000029363|ENST00000531224|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	541.753661	1081.49277	0.0050776	2.7508E-06	-0.040881	-2.2147E-05	-0.035803	-1.9396E-05	541.7535012827606	37.996	0.44095	38.013	37.79	38.231	0.016563	0.10599	-0.00020751	NaN	167.23	36	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	307200			39516	878	26308	26320							-0.044717517611843505
NTEEEGLKY	9	Unmodified	_NTEEEGLKY_					0	0	0		nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;ENSG00000029363|ENST00000531224|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	541.753661	1081.49277	0.2753	0.00014914	-0.20117	-0.00010898	0.074131	4.0161E-05	541.7533442557431	37.771	0.53621	37.87	37.623	38.159	0.099277	-0.036482	-0.00038118	NaN	167.23	42	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	333100			39517	878	26308	26320							-0.044717517611843505
NTEEEGLKY	9	Unmodified	_NTEEEGLKY_					0	0	0		nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;ENSG00000029363|ENST00000531224|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	541.753661	1081.49277	0.30446	0.00016494	-0.46949	-0.00025435	-0.16503	-8.9406E-05	541.753273028895	37.867	0.47153	37.809	37.566	38.038	-0.057915	-0.097545	-0.00067192	NaN	167.23	39	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	292220			39518	878	26308	26320							-0.044717517611843505
NTEFSKKES	9	Unmodified	_NTEFSKKES_					0	0	0			REV__ENSG00000175985|ENST00000322564|PLEKHD1	REV__ENSG00000175985|ENST00000322564|PLEKHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2865600585938	2	535.261653	1068.50875	0.13436	7.192E-05	0.23081	0.00012354	0.36517	0.00019546	535.2615700146873	86.268	0.32169	86.711	86.571	86.892	0.44331					11	7	2	0	0	0	0.20789	1	10091	10091		9.7057	0	1	53034	+		39519	22095	26309	26321	45017	45017					-0.022760455242632815
NTEVKPVIHSR	11	Unmodified	_NTEVKPVIHSR_					0	0	0		ENSG00000146038|ENST00000378454|DCDC2	ENSG00000146038|ENST00000378454|DCDC2	ENSG00000146038|ENST00000378454|DCDC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3574829101562	2	640.359493	1278.70443	-0.024279	-1.5547E-05	-0.77441	-0.0004959	-0.79869	-0.00051145	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.6493	1	10050	10050		38.754	0.94209	1	448130			39520	4814	26310	26322	45018	45018					0.07622964720417258
NTEVKPVIHSR	11	Unmodified	_NTEVKPVIHSR_					0	0	0		ENSG00000146038|ENST00000378454|DCDC2	ENSG00000146038|ENST00000378454|DCDC2	ENSG00000146038|ENST00000378454|DCDC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3590698242188	2	640.359493	1278.70443	0.92817	0.00059436	-1.9336	-0.0012382	-1.0054	-0.00064384	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.6493	2	10334	10334;10429		38.754	1.2454	1	603720			39521	4814	26310	26322	45019;45020	45019					0.07622964720417258
NTGLRKKAS	9	Unmodified	_NTGLRKKAS_					0	0	0			REV__nc|ENSG00000112984|O95235-2|KIF20A	REV__nc|ENSG00000112984|O95235-2|KIF20A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.790771484375	2	487.790715	973.566878	-1.3135	-0.00064074	1.1066	0.00053979	-0.20694	-0.00010094	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.77244	1	8429	8429		32.812	2.3088	1	2239000	+		39522	17973	26311	26323	45021	45021					0.07903680911658739
NTHKGEQKVEK	11	Unmodified	_NTHKGEQKVEK_					0	0	0		ENST00000400331.9_1_7:20201478-20203908:-|nuORF	ENST00000400331.9_1_7:20201478-20203908:-|nuORF	ENST00000400331.9_1_7:20201478-20203908:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	649.34912109375	2	649.346583	1296.67861	1.6831	0.0010929	2.3464	0.0015236	4.0294	0.0026165	649.348097345224	81.105	1.2347	81.605	80.837	82.072	0.49966					37	29	2	0	0	0	0.7144	1	9372	9372		29.17	1.2878	1	1374400			39523	11224	26312	26324	45022	45022					0.04214070478155918
NTHLVGGRLKL	11	Unmodified	_NTHLVGGRLKL_					0	0	0		ENST00000542104.5_2_12:65090281-65090509:+|nuORF	ENST00000542104.5_2_12:65090281-65090509:+|nuORF	ENST00000542104.5_2_12:65090281-65090509:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.24688720703125	3	403.247173	1206.71969	-0.96192	-0.00038789	0.31664	0.00012768	-0.64528	-0.00026021	403.2472281244655	104.88	3.5231	104.88	103.72	107.24	0					230	83	5	0	0	0	0.77421	1	10822	10822		25.892	14.894	1	5402700			39524	13525	26313	26325	45023	45023					0.12459876308275852
NTHLVGGRLKL	11	Unmodified	_NTHLVGGRLKL_					0	0	0		ENST00000542104.5_2_12:65090281-65090509:+|nuORF	ENST00000542104.5_2_12:65090281-65090509:+|nuORF	ENST00000542104.5_2_12:65090281-65090509:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3665161132812	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.68532	1	11562	11562		33.922	4.7516	1	63350000			39525	13525	26313	26325	45024	45024					0.12459876308275852
NTHLVGGRLKL	11	Unmodified	_NTHLVGGRLKL_					0	0	0		ENST00000542104.5_2_12:65090281-65090509:+|nuORF	ENST00000542104.5_2_12:65090281-65090509:+|nuORF	ENST00000542104.5_2_12:65090281-65090509:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3643798828125	2	604.367121	1206.71969	-0.12334	-7.4541E-05	-0.75755	-0.00045784	-0.88089	-0.00053238	604.3664641900143	107.88	0.45378	107.91	107.52	107.97	0.035622					25	10	3	0	0	0	0.7144	1	11828	11828		29.17	3.1067	1	10672000			39526	13525	26313	26325	45025	45025					0.12459876308275852
NTHRKNRK	8	Unmodified	_NTHRKNRK_					0	0	0			REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|45|2|sense	REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|45|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.304931640625	2	527.304855	1052.59516	-0.62415	-0.00032912	0.34737	0.00018317	-0.27678	-0.00014595	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.84341	1	10104	10104		24.203	0	1	949980	+		39527	29511	26314	26326	45026	45026					0.07096423611619684
NTIDPSHPM	9	Unmodified	_NTIDPSHPM_					0	0	0		ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	ENSG00000090861|ENST00000261772|AARS1	ENSG00000090861|ENST00000261772|AARS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.2319030761719	2	506.231842	1010.44913	-0.36097	-0.00018273	0.3721	0.00018837	0.011129	5.634E-06	506.23187160777394	39.008	1.0724	39.562	39.153	40.225	0.55449					59	24	3	0	0	0	0.18601	1	3267	3267		76.774	13.796	1	624980			39528	1656	26315	26327	45027	45027					-0.05567639739308561
NTIDPSHPM	9	Unmodified	_NTIDPSHPM_					0	0	0		ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	ENSG00000090861|ENST00000261772|AARS1	ENSG00000090861|ENST00000261772|AARS1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	506.231842	1010.44913	-1.1376	-0.00057588	1.0353	0.0005241	-0.10227	-5.1774E-05	506.23218579088916	39.271	1.0185	39.639	39.091	40.11	0.36797	0.038424	0.00042901	NaN	76.774	56	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310620			39529	1656	26315	26327							-0.05567639739308561
NTIFAKKPL	9	Unmodified	_NTIFAKKPL_					0	0	0			REV__CON__Q3T052	REV__CON__Q3T052	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3145141601562	2	516.316035	1030.61752	-0.25799	-0.00013321	-4.1781	-0.0021572	-4.4361	-0.0022904	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.77244	1	10465	10465		32.812	1.2826	1	82226000	+	+	39530	16016	26316	26328	45028	45028					0.10343210236646883
NTISCGNV	8	Unmodified	_NTISCGNV_					0	0	0			REV__nc|ENSG00000151276|Q96QZ7-3|MAGI1	REV__nc|ENSG00000151276|Q96QZ7-3|MAGI1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.2327575683594	2	404.186903	806.359253	0.58682	0.00023718	1.3665	0.00055234	1.9534	0.00078952	404.18803074972766	84.227	2.541	84.375	83.23	85.771	0.14794					110	58	3	0	0	0	0.4196	1	8276	8276		27.882	0	1	152390	+		39531	20243	26317	26329	45029	45029					-0.051672693478849396
NTITYETLKY	10	Unmodified	_NTITYETLKY_					0	0	0		ENST00000486848.1_1_7:65579949-65599362:+|nuORF;ENSG00000241258|ENST00000395326|CRCP	ENST00000486848.1_1_7:65579949-65599362:+|nuORF	ENST00000486848.1_1_7:65579949-65599362:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.3221435546875	2	623.321711	1244.62887	-0.74016	-0.00046135	1.5822	0.00098625	0.84209	0.00052489	623.3225358169732	57.039	0.54884	57.039	56.823	57.372	0					53	23	3	0	0	0	0.40664	1	4886	4886		63.534	0.22758	1	309880			39532	8791	26318	26330	45030	45030					0.016339427494813208
NTKIAVTK	8	Unmodified	_NTKIAVTK_					0	0	0		ENSG00000077254|ENST00000370794|USP33;nc|ENSG00000077254|Q8TEY7|USP33;ENST00000533928.1_1_1:78163515-78167102:-|nuORF	ENSG00000077254|ENST00000370794|USP33	ENSG00000077254|ENST00000370794|USP33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7708740234375	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.81897	1	2333	2333		20.947	0	1	1041500			39533	1377	26319	26331	45031	45031					0.0865437527713766
NTKKRGLTG	9	Unmodified	_NTKKRGLTG_					0	0	0		ENSG00000111845|ENST00000379568|PAK1IP1	ENSG00000111845|ENST00000379568|PAK1IP1	ENSG00000111845|ENST00000379568|PAK1IP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7905578613281	2	487.790715	973.566878	-0.70733	-0.00034503	0.46293	0.00022581	-0.2444	-0.00011922	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.76419	1	8275	8275		35.152	5.3105	1	2348200			39534	2616	26320	26332	45032	45032					0.07903680911658739
NTKLKRTTD	9	Unmodified	_NTKLKRTTD_					0	0	0			REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|85|3|sense	REV__L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|85|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.806884765625	2	538.806562	1075.59857	0.74987	0.00040403	-0.4983	-0.00026849	0.25156	0.00013554	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.78528	1	9094	9094		29.17	1.2878	1	840570	+		39535	29516	26321	26333	45033	45033					0.0637962887494723
NTKLLSGT	8	Unmodified	_NTKLLSGT_					0	0	0			REV__ENSG00000174106|ENST00000308330|LEMD3	REV__ENSG00000174106|ENST00000308330|LEMD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.2404479980469	2	417.239993	832.465432	-1.1717	-0.00048886	-1.3676	-0.00057062	-2.5392	-0.0010595	417.23924184101116	88.678	1.8374	88.678	88.117	89.954	0					78	42	3	0	0	0	0.88185	1	8518	8518		32.812	1.2826	1	977120	+		39536	21973	26322	26334	45034	45034					0.04249809489101608
NTKRNAEI	8	Unmodified	_NTKRNAEI_					0	0	0			REV__chr4:56448823-56451872|31|57.9|0.39|7.2|+|1|PAICS,PAICS|1	REV__chr4:56448823-56451872|31|57.9|0.39|7.2|+|1|PAICS,PAICS|1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	473.2575378417969	2	473.259248	944.503943	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.282	1	45.294	44.794	45.794	0.012058								0	0	0	0.29403	1	3250	3250		32.812	4.5581	1		+		39537	15834	26323	26335	45035	45035					0.02947115123618005
NTKTQPLEF	9	Unmodified	_NTKTQPLEF_					0	0	0			REV__ENSG00000266826|ENST00000583666|IGBP1C	REV__ENSG00000266826|ENST00000583666|IGBP1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.2816772460938	2	539.282389	1076.55022	-1.3286	-0.00071648	1.3012	0.00070169	-0.02742	-1.4787E-05	539.2828341074548	58.89	0.83183	59.282	58.736	59.568	0.39209					32	19	2	0	0	0	0.31972	1	6189	6189		63.306	4.5243	1	737190	+		39538	23965	26324	26336	45036	45036					0.01501135235048423
NTLAIELAPR	10	Unmodified	_NTLAIELAPR_					0	0	0		ENSG00000187630|ENST00000335125|DHRS4L2;nc|ENSG00000187630|Q6PKH6-2|DHRS4L2	ENSG00000187630|ENST00000335125|DHRS4L2	ENSG00000187630|ENST00000335125|DHRS4L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3185424804688	2	549.319306	1096.62406	-1.4544	-0.00079891	-1.5897	-0.00087326	-3.0441	-0.0016722	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.86348	1	10461	10461		31.53	2.3598	1	2310400			39539	7867	26325	26337	45037	45037					0.0796110339738334
NTLFALKRMA	10	Unmodified	_NTLFALKRMA_					0	0	0		nc|ENSG00000187720|Q6ZMP0-3|THSD4	nc|ENSG00000187720|Q6ZMP0-3|THSD4	nc|ENSG00000187720|Q6ZMP0-3|THSD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.8330688476562	2	582.831526	1163.6485	0.71631	0.00041749	1.2981	0.00075659	2.0144	0.0011741	582.8322944715994	93.943	3.3707	94.171	93.279	96.65	0.22863					214	80	3	0	0	0	0.8608	1	9656	9656		34.173	0	1	862210			39540	15166	26326	26338	45038	45038					0.07322040279245812
NTLFLRIPIAK	11	Unmodified	_NTLFLRIPIAK_					0	0	0			REV__ENSG00000278540|ENST00000616317|ACACA	REV__ENSG00000278540|ENST00000616317|ACACA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	643.40185546875	2	643.403173	1284.79179	5.4431	0.0035021	0.05995	3.8572E-05	5.5031	0.0035407	643.4034130492915	105.51	1.5585	105.7	104.97	106.53	0.18647					125	47	4	0	0	0	0.7144	1	12885	12885		29.17	4.6509	1	751890	+		39541	24037	26327	26339	45039	45039					0.16078790661981657
NTLHPQQLPT	10	Unmodified	_NTLHPQQLPT_					0	0	0			REV__ENSG00000198646|ENST00000359003|NCOA6	REV__ENSG00000198646|ENST00000359003|NCOA6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.806396484375	2	574.806562	1147.59857	-1.3326	-0.00076597	1.4206	0.00081658	0.088041	5.0607E-05	574.8072287376872	33.945	0.68733	33.945	33.651	34.339	0					36	19	2	0	0	0	0.54701	1	1793	1793		52.937	6.9645	1	241710	+		39542	23350	26328	26340	45040	45040					0.030676288749418745
NTLHPQQLPT	10	Unmodified	_NTLHPQQLPT_					0	0	0			REV__ENSG00000198646|ENST00000359003|NCOA6	REV__ENSG00000198646|ENST00000359003|NCOA6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.8063354492188	2	574.806562	1147.59857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.483	1	33.653	33.153	34.153	0.16971								0	0	0	0.45132	1	2415	2415		51.528	3.8704	1		+		39543	23350	26328	26340	45041	45041					0.030676288749418745
NTLKKIAASEK	11	Unmodified	_NTLKKIAASEK_					0	0	0		nc|ENSG00000136250|P28039-2|AOAH;ENSG00000136250|ENST00000617537|AOAH	nc|ENSG00000136250|P28039-2|AOAH	nc|ENSG00000136250|P28039-2|AOAH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.858642578125	2	601.858795	1201.70304	1.0107	0.00060827	-2.806	-0.0016888	-1.7953	-0.0010805	601.8569689467788	103.23	2.1882	103.41	103.08	105.27	0.18297					123	54	4	0	0	0	0.76699	1	10941	10941		18.262	1.7889	1	2928900			39544	4098	26329	26341	45042	45042					0.11025330631650831
NTLKKKNSV	9	Unmodified	_NTLKKKNSV_					0	0	0		L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|11|1|sense	L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|11|1|sense	L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|11|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3143310546875	2	516.314023	1030.61349	1.9037	0.0009829	-1.9331	-0.0009981	-0.029436	-1.5198E-05	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.73802	1	12138	12138		37.812	0.65241	1	22616000			39545	14571	26330	26342	45043	45043					0.09941120742928433
NTLKSLSRI	9	Unmodified	_NTLKSLSRI_					0	0	0		nc|ENSG00000168658|Q502W6-6|VWA3B	nc|ENSG00000168658|Q502W6-6|VWA3B	nc|ENSG00000168658|Q502W6-6|VWA3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3132934570312	2	516.314023	1030.61349	2.7793	0.001435	-3.2178	-0.0016614	-0.43843	-0.00022637	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.7932	1	11093	11093		26.693	0	1	67991000			39546	15080	26331	26343	45044	45044					0.09941120742928433
NTLLLTDYNG	10	Unmodified	_NTLLLTDYNG_					0	0	0		ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-4|SVEP1;ENST00000467821.1_1_9:113205816-113312285:-|nuORF	ENSG00000165124|ENST00000374469|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.2863159179688	2	562.285128	1122.5557	-0.14594	-8.2059E-05	2.8601	0.0016082	2.7142	0.0015262	562.2865603679315	63.403	0.99493	63.79	63.402	64.397	0.38779					51	22	3	0	0	0	0.47072	1	6820	6820		58.246	3.4699	1	480010			39547	6050	26332	26344	45045	45045					-0.0006718597314829822
NTLLNRGHA	9	Unmodified	_NTLLNRGHA_					0	0	0		ENSG00000127947|ENST00000248594|PTPN12;nc|ENSG00000127947|Q05209-2|PTPN12;nc|ENSG00000127947|Q05209-3|PTPN12	ENSG00000127947|ENST00000248594|PTPN12	ENSG00000127947|ENST00000248594|PTPN12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.2789611816406	2	498.27269	994.530826	0.11979	5.9689E-05	-3.476	-0.001732	-3.3562	-0.0016723	498.27035028324127	39.134	0.76888	39.082	38.607	39.376	-0.052727					27	22	2	0	0	0	0.20789	1	2320	2320		21.96	1.4781	1	104340			39548	3519	26333	26345	45046	45046					0.03334223734805164
NTLLNRGHA	9	Unmodified	_NTLLNRGHA_					0	0	0		ENSG00000127947|ENST00000248594|PTPN12;nc|ENSG00000127947|Q05209-2|PTPN12;nc|ENSG00000127947|Q05209-3|PTPN12	ENSG00000127947|ENST00000248594|PTPN12	ENSG00000127947|ENST00000248594|PTPN12	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	498.27269	994.530826	-0.63665	-0.00031722	-3.6838	-0.0018355	-4.3204	-0.0021528	498.27041461821074	39.286	0.70362	39.297	38.757	39.461	0.010708	0.15168	-4.0649E-05	NaN	21.96	30	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104790			39549	3519	26333	26345							0.03334223734805164
NTLLRPSR	8	Unmodified	_NTLLRPSR_					0	0	0			REV__nc|ENSG00000165071|Q6P5X7-3|TMEM71	REV__nc|ENSG00000165071|Q6P5X7-3|TMEM71	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.7854919433594	2	478.785433	955.556313	-0.98121	-0.00046979	2.8532	0.0013661	1.872	0.0008963	478.7857916206205	92.576	2.3382	92.576	91.633	93.971	0					123	53	4	0	0	0	0.87479	1	9088	9088		30.504	5.0535	1	417180	+		39550	21144	26334	26346	45047	45047					0.07675698257230579
NTLPLIAPPLA	11	Unmodified	_NTLPLIAPPLA_					0	0	0		ENST00000333337.3_1_21:34401339-34401411:+|nuORF	ENST00000333337.3_1_21:34401339-34401411:+|nuORF	ENST00000333337.3_1_21:34401339-34401411:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3396606445312	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.70737	1	12367	12367		30.318	3.2704	1	4071000			39551	10136	26335	26347	45048	45048					0.11535748579603933
NTLRAPRV	8	Unmodified	_NTLRAPRV_					0	0	0		ENSG00000151650|ENST00000325980|VENTX	ENSG00000151650|ENST00000325980|VENTX	ENSG00000151650|ENST00000325980|VENTX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.7798767089844	2	463.780151	925.545748	-1.147	-0.00053196	-1.1857	-0.00054989	-2.3327	-0.0010818	463.7795203581368	39.498	0.37845	39.506	39.297	39.676	0.007618					15	9	2	0	0	0	0.89494	1	2415	2415		37.159	3.6435	1	213380			39552	5132	26336	26348	45049	45049					0.07999715602795732
NTLVKTAS	8	Unmodified	_NTLVKTAS_					0	0	0		nc|ENSG00000133422|Q9Y6X9-2|MORC2;ENSG00000133422|ENST00000397641|MORC2	nc|ENSG00000133422|Q9Y6X9-2|MORC2	nc|ENSG00000133422|Q9Y6X9-2|MORC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.23956298828125	2	417.239993	832.465432	0.6222	0.00025961	-1.5968	-0.00066624	-0.97458	-0.00040663	417.23868874141215	88.354	2.9102	88.504	86.614	89.525	0.15055					153	68	4	0	0	0	0.86677	1	8782	8782		27.882	0	1	1138800			39553	3877	26337	26349	45050	45050					0.042498094890902394
NTLVKTAS	8	Unmodified	_NTLVKTAS_					0	0	0		nc|ENSG00000133422|Q9Y6X9-2|MORC2;ENSG00000133422|ENST00000397641|MORC2	nc|ENSG00000133422|Q9Y6X9-2|MORC2	nc|ENSG00000133422|Q9Y6X9-2|MORC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2395935058594	2	417.239993	832.465432	-1.05	-0.00043811	-0.95536	-0.00039861	-2.0054	-0.00083672	417.2394458180228	88.189	1.3218	88.652	88.27	89.592	0.46312					60	32	3	0	0	0	0.90523	1	10411	10411		40.778	6.6056	1	1050800			39554	3877	26337	26349	45051	45051					0.042498094890902394
NTLVRVGH	8	Unmodified	_NTLVRVGH_					0	0	0			REV__nc|ENSG00000143493|Q9NVH2-4|INTS7	REV__nc|ENSG00000143493|Q9NVH2-4|INTS7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.2588806152344	2	448.259051	894.503549	0.30626	0.00013729	-0.27451	-0.00012305	0.031752	1.4233E-05	448.2588270898945	89.76	2.8105	90.21	89.202	92.013	0.45058					113	70	4	0	0	0	0.89043	1	10598	10598		35.618	5.7767	1	1731800	+		39555	19816	26338	26350	45052	45052					0.05207740194430244
NTNIPIGNK	9	Unmodified	_NTNIPIGNK_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.7689208984375	2	485.769448	969.524344	0.90434	0.0004393	-0.68838	-0.0003344	0.21595	0.0001049	485.7688924380715	33.751	0.62085	34.056	33.745	34.366	0.30494					30	14	3	0	0	0	0.55097	1	2483	2483		49.442	3.4693	1	426330			39556	2846	26339	26351	45053	45053					0.03836285783438598
NTNIPIGNK	9	Unmodified	_NTNIPIGNK_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	485.769448	969.524344	0.663	0.00032206	-0.51358	-0.00024948	0.14942	7.2583E-05	485.7689532486528	33.752	0.54085	33.922	33.695	34.236	0.16971	-0.067197	9.2358E-05	NaN	49.442	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	431010			39557	2846	26339	26351							0.03836285783438598
NTNKKTKPKSD	11	Unmodified	_NTNKKTKPKSD_					0	0	0		ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP	ENSG00000163602|ENST00000477973|RYBP	ENSG00000163602|ENST00000477973|RYBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.84912109375	2	630.848958	1259.68336	1.4391	0.00090789	-0.74696	-0.00047122	0.69219	0.00043667	630.8483297222848	110.34	1.0207	110.45	110.27	111.29	0.11659					74	37	4	0	0	0	0.72106	1	11890	11890		28.081	0.19925	1	1648400			39558	5832	26340	26352	45054	45054					0.06390954620906086
NTPIGDGPVL	10	Unmodified	_NTPIGDGPVL_					0	0	0		CON__Q9U6Y5	CON__Q9U6Y5	CON__Q9U6Y5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7640075683594	2	491.763832	981.513111	0.17598	8.6541E-05	-0.77913	-0.00038315	-0.60315	-0.00029661	491.7633396187307	48.936	1.0063	49.84	49.489	50.496	0.90424					64	24	4	0	0	0	0.3985	1	4777	4777		64.207	3.9133	1	5497800		+	39559	642	26341	26353	45055	45055					0.02161463689287757
NTQGGLPYLL	10	Unmodified	_NTQGGLPYLL_					0	0	0			REV__ENSG00000095319|ENST00000372577|NUP188	REV__ENSG00000095319|ENST00000372577|NUP188	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.2947387695312	2	538.292756	1074.57096	-0.33111	-0.00017823	4.3354	0.0023337	4.0043	0.0021555	538.2950923314316	62.814	1.1395	63.368	62.907	64.046	0.55449					67	26	4	0	0	0	0.19302	1	6767	6767		87.696	8.2454	1	394730	+		39560	17057	26342	26354	45056	45056					0.036657256147236694
NTQLETTSSSA	11	Unmodified	_NTQLETTSSSA_					0	0	0			REV__ENST00000446198.5_1_7:131188931-131189063:-|nuORF	REV__ENST00000446198.5_1_7:131188931-131189063:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.7659301757812	2	569.764757	1137.51496	-0.41689	-0.00023753	4.0459	0.0023052	3.629	0.0020677	569.7669206629952	60.707	0.52001	60.716	60.36	60.88	0.0081215					45	17	3	0	0	0	0.60687	1	5256	5256		43.651	2.8726	1	499530	+		39561	26802	26343	26355	45057	45057					-0.04829572083417588
NTRGHWIV	8	Unmodified	_NTRGHWIV_					0	0	0			REV__nc|ENSG00000183878|O14607-5|UTY	REV__nc|ENSG00000183878|O14607-5|UTY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7635803222656	2	491.764501	981.514448	0.17598	8.6541E-05	-2.1389	-0.0010518	-1.9629	-0.00096531	491.7633396187307	48.936	1.0063	49.84	49.489	50.496	0.90424					64	24	4	0	0	0	0.92973	1	4765	4765		50.025	5.9077	1	5497800	+		39562	22633	26344	26356	45058	45058					0.02295142568709707
NTRILDRK	8	Unmodified	_NTRILDRK_					0	0	0			REV__ENSG00000047410|ENST00000367478|TPR	REV__ENSG00000047410|ENST00000367478|TPR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.3056335449219	2	508.30399	1014.59343	0.58416	0.00029693	-0.97106	-0.00049359	-0.3869	-0.00019666	508.3032296248717	17.498	0.34094	17.015	16.851	17.192	-0.48256					12	7	2	0	0	0	0.82658	1	281	281		21.96	0	1	74746	+		39563	16352	26345	26357	45059	45059					0.08671369802993922
NTRLFRLR	8	Unmodified	_NTRLFRLR_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5;REV__nc|ENSG00000053747|Q16787-3|LAMA3	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.32666015625	2	538.327799	1074.64105	-0.15628	-8.4129E-05	-0.67708	-0.00036449	-0.83336	-0.00044862	538.3273734998361	103.57	1.2288	103.57	103.11	104.34	-0.0016403					90	29	4	0	0	0	0.89494	1	11124	11124		37.159	2.9866	1	1025700	+		39564	18894;16391	26346	26358	45060	45060					0.1067106879381754
NTRLFRLR	8	Unmodified	_NTRLFRLR_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5;REV__nc|ENSG00000053747|Q16787-3|LAMA3	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3251342773438	2	538.327799	1074.64105	0.84014	0.00045227	-2.6234	-0.0014122	-1.7832	-0.00095997	538.326371026974	100.85	3.8483	100.99	100.33	104.18	0.14352					341	94	6	0	0	0	0.8347	1	10860	10860		23.042	2.0956	1	92159000	+		39565	18894;16391	26346	26358	45061	45061					0.1067106879381754
NTRLITYLI	9	Unmodified	_NTRLITYLI_					0	0	0			REV__ENSG00000148136|ENST00000277216|OR13C4	REV__ENSG00000148136|ENST00000277216|OR13C4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8292846679688	2	553.832049	1105.64954	-0.44019	-0.00024379	-2.5784	-0.001428	-3.0186	-0.0016718	553.8305183816093	102.73	0.52669	102.73	102.43	102.96	0					32	12	3	0	0	0	0.78536	1	10526	10526		29.15	7.1897	1	456910	+		39566	20097	26347	26359	45062	45062					0.10094577919812764
NTRLWDLFV	9	Unmodified	_NTRLWDLFV_					0	0	0			REV__ENSG00000198952|ENST00000361813|SMG5	REV__ENSG00000198952|ENST00000361813|SMG5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3538208007812	2	582.314023	1162.61349	0.88306	0.00051422	2.1812	0.0012701	3.0642	0.0017843	582.3127601045646	103.64	0.27844	103.77	103.63	103.91	0.12622					13	6	3	0	0	0	0.20789	1	10978	10978		34.173	2.6427	1	203900	+		39567	23427	26348	26360	45063	45063					0.03869120742933774
NTSKQNLIK	9	Unmodified	_NTSKQNLIK_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|21|1|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|21|1|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|21|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3042602539062	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.58668	1	10645	10645		47.657	6.8792	1	11944000			39568	14691	26349	26361	45064	45064					0.07224530363282611
NTSSVPGTSFF	11	Unmodified	_NTSSVPGTSFF_					0	0	0		ENST00000549034.1_1_12:56383771-56384735:+|nuORF	ENST00000549034.1_1_12:56383771-56384735:+|nuORF	ENST00000549034.1_1_12:56383771-56384735:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	572.2713623046875	2	572.269478	1142.5244	0.26303	0.00015052	-0.031692	-1.8136E-05	0.23134	0.00013239	572.2687913408686	59.46	0.65313	59.429	59.111	59.764	-0.031727					33	15	3	0	0	0	0.57736	1	5562	5562		46.457	0.50483	1	157960			39569	13628	26350	26362	45065	45065					-0.04115759007208908
NTSVEVYY	8	Unmodified	_NTSVEVYY_					0	0	0			REV__ENSG00000183826|ENST00000481247|BTBD9	REV__ENSG00000183826|ENST00000481247|BTBD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7275085449219	2	487.726915	973.439277	0.45649	0.00022264	-0.73056	-0.00035632	-0.27408	-0.00013367	487.72644551974395	51.554	0.78324	52.221	51.854	52.637	0.66729					57	18	4	0	0	0	0.60357	1	5180	5180		71.296	5.4925	1	8286300	+		39570	22631	26351	26363	45066	45066					-0.048505044730404734
NTTPPVLSVGR	11	Unmodified	_NTTPPVLSVGR_					0	0	0		ENST00000361368.6_1_7:98625224-98626022:-|nuORF	ENST00000361368.6_1_7:98625224-98626022:-|nuORF	ENST00000361368.6_1_7:98625224-98626022:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.8218994140625	2	570.822212	1139.62987	-0.23349	-0.00013328	3.926	0.0022411	3.6925	0.0021078	570.8242504843668	61.573	0.86258	61.603	61.338	62.201	0.029575					86	37	3	0	0	0	0.67041	1	5751	5751		36.318	1.1656	1	572170			39571	10472	26352	26364	45067	45067					0.06564201909031908
NTVLHSYLI	9	Unmodified	_NTVLHSYLI_					0	0	0			REV__ENSG00000179588|ENST00000319555|ZFPM1	REV__ENSG00000179588|ENST00000319555|ZFPM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.29345703125	2	530.295299	1058.57605	-1.2396	-0.00065735	-2.6354	-0.0013976	-3.875	-0.0020549	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.72402	1	10843	10843		38.806	3.6541	1	1818700	+		39572	22343	26353	26365	45068	45068					0.049100294773325004
NTVRDLLGIKH	11	Unmodified	_NTVRDLLGIKH_					0	0	0			REV__nc|ENSG00000159640|P12821-2|ACE	REV__nc|ENSG00000159640|P12821-2|ACE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5815124511719	3	422.582333	1264.72517	-1.733	-0.00073233	0.89401	0.00037779	-0.83897	-0.00035453	422.5826240153895	97.352	3.8291	97.583	96.825	100.65	0.23103					216	89	4	0	0	0	0.74763	1	10040	10040		15.337	0	1	506650	+		39573	20671	26354	26366	45069	45069					0.1033955510006308
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.5975341796875	3	432.597983	1294.77212	-0.96196	-0.00041614	0.089593	3.8758E-05	-0.87237	-0.00037738	432.5979589237285	106.62	0.93322	106.62	106.18	107.11	0					73	20	5	0	0	0	0.76699	1	11066	11066		21.78	0	1	2667500			39574	6985	26355	26367	45070	45070					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.5976867675781	3	432.597983	1294.77212	-0.16962	-7.3379E-05	-0.60975	-0.00026378	-0.77937	-0.00033715	432.5976970384716	106.55	1.2774	106.52	105.86	107.13	-0.025146					98	24	5	0	0	0	0.7144	1	11614	11614		32.034	7.8023	1	15884000			39575	6985	26355	26367	45071	45071					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.59771728515625	3	432.597983	1294.77212	-0.16983	-7.3466E-05	0.49269	0.00021314	0.32286	0.00013967	432.59814834944257	107.38	0.9445	107.34	106.95	107.89	-0.034409					44	22	2	0	0	0	0.75164	1	11734	11734		25.068	14.506	1	14888000			39576	6985	26355	26367	45072	45072					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.59771728515625	3	432.597983	1294.77212	2.718	0.0011758	-3.5435	-0.0015329	-0.82558	-0.00035714	432.59643721162763	106.42	1.1232	106.39	105.97	107.1	-0.036613					90	25	5	0	0	0	0.75164	1	11746	11746		25.068	4.0355	1	14662000			39577	6985	26355	26367	45073	45073					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.5977783203125	3	432.597983	1294.77212	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107	1	106.96	106.46	107.46	-0.034134								0	0	0	0.56276	1	11841	11841		26.75	8.9166	1				39578	6985	26355	26367	45074	45074					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.59765625	3	432.597983	1294.77212	2.4047	0.0010403	-3.2118	-0.0013894	-0.80705	-0.00034913	432.5965673542701	106.31	1.2824	106.34	105.87	107.15	0.03688					86	29	5	0	0	0	0.7434	1	11675	11675		21.032	0	1	16046000			39579	6985	26355	26367	45075	45075					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.59765625	3	432.597983	1294.77212	2.4108	0.0010429	-2.4605	-0.0010644	-0.04966	-2.1483E-05	432.5968710757986	107.1	1.2973	107.13	106.67	107.97	0.035622					60	30	2	0	0	0	0.7434	1	11844	11844		26.75	0.85799	1	18390000			39580	6985	26355	26367	45076	45076					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5979919433594	3	432.597983	1294.77212	-1.5719	-0.00068002	0.90427	0.00039118	-0.66768	-0.00028884	432.5984109358272	105.99	1.0468	106.14	105.65	106.69	0.14843					117	25	6	0	0	0	0.76699	1	11329	11329		21.78	8.2725	1	44749000			39581	6985	26355	26367	45077	45077					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5975646972656	3	432.597983	1294.77212	-1.5737	-0.00068079	1.9561	0.00084622	0.3824	0.00016543	432.59875141375613	106.97	1.3878	107.11	106.64	108.03	0.13866					68	34	2	0	0	0	0.7434	2	11582	11437;11582		28.577	14.817	1	21235000			39582	6985	26355	26367	45078;45079	45079					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.5976257324219	3	432.597983	1294.77212	0.73482	0.00031788	-1.4599	-0.00063157	-0.72512	-0.00031369	432.59735068529625	106.11	1.1677	106.21	105.57	106.74	0.099007					121	28	6	0	0	0	0.77061	1	11350	11350		21.032	0	1	31122000			39583	6985	26355	26367	45080	45080					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.5976257324219	3	432.597983	1294.77212	0.73472	0.00031784	-0.49869	-0.00021573	0.23603	0.00010211	432.59773549861245	107.06	1.3761	107.15	106.64	108.02	0.091263					138	33	6	0	0	0	0.77061	1	11410	11410		15.921	0	1	14015000			39584	6985	26355	26367	45081	45081					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5978698730469	3	432.597983	1294.77212	-1.8326	-0.00079276	0.99264	0.00042942	-0.83992	-0.00036335	432.5983701682112	106.14	0.94881	106.2	105.74	106.69	0.053749					97	22	5	0	0	0	0.76322	2	11288	11288;11312		28.577	8.2617	1	20584000			39585	6985	26355	26367	45082;45083	45082					0.13652414651232903
NTVVQKPRQIL	11	Unmodified	_NTVVQKPRQIL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.59765625	3	432.597983	1294.77212	1.8145	0.00078493	-2.7981	-0.0012105	-0.98367	-0.00042553	432.59669589863887	105.91	1.0201	106.04	105.7	106.72	0.12742					97	40	4	0	0	0	0.73893	1	12921	12921		27.644	4.266	1	823850			39586	6985	26355	26367	45084	45084					0.13652414651232903
NVAAIVPK	8	Unmodified	_NVAAIVPK_					0	0	0			REV__ENSG00000127884|ENST00000368547|ECHS1	REV__ENSG00000127884|ENST00000368547|ECHS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2570495605469	2	406.255446	810.496338	0.25887	0.00010517	4.1575	0.001689	4.4164	0.0017942	406.2570424536752	48.047	0.7146	48.085	47.766	48.48	0.037731					39	21	2	0	0	0	0.85277	1	3636	3636		25.45	6.0902	1	225620	+		39587	18752	26356	26368	45085	45085					0.08351007593989834
NVAAIVPK	8	Unmodified	_NVAAIVPK_					0	0	0			REV__ENSG00000127884|ENST00000368547|ECHS1	REV__ENSG00000127884|ENST00000368547|ECHS1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.255446	810.496338	-1.7639	-0.00071658	5.954	0.0024188	4.1901	0.0017023	406.2578499638844	48.162	1.2774	48.162	47.581	48.858	0	0.067328	0.0013125	NaN	25.45	75	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	228770	+		39588	18752	26356	26368							0.08351007593989834
NVAAIVPK	8	Unmodified	_NVAAIVPK_					0	0	0			REV__ENSG00000127884|ENST00000368547|ECHS1	REV__ENSG00000127884|ENST00000368547|ECHS1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	406.255446	810.496338	0.018392	7.4718E-06	4.7648	0.0019357	4.7832	0.0019432	406.25729834843725	47.993	0.86784	47.984	47.69	48.558	-0.0093269	-0.11091	0.00034633	NaN	25.45	40	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	348530	+		39589	18752	26356	26368							0.08351007593989834
NVAAIVPK	8	Unmodified	_NVAAIVPK_					0	0	0			REV__ENSG00000127884|ENST00000368547|ECHS1	REV__ENSG00000127884|ENST00000368547|ECHS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.255446	810.496338	-0.8201	-0.00033317	5.5882	0.0022702	4.7681	0.0019371	406.25764289582014	48.046	0.9135	48.021	47.704	48.618	-0.025112	-0.073759	0.0010153	NaN	25.45	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	235870	+		39590	18752	26356	26368							0.08351007593989834
NVAAIVPK	8	Unmodified	_NVAAIVPK_					0	0	0			REV__ENSG00000127884|ENST00000368547|ECHS1	REV__ENSG00000127884|ENST00000368547|ECHS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.255446	810.496338	2.3531	0.00095595	2.1376	0.00086842	4.4907	0.0018244	406.25621647540544	48.341	0.87989	48.338	47.867	48.747	-0.002449	0.24386	-0.0017883	NaN	25.45	43	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	230060	+		39591	18752	26356	26368							0.08351007593989834
NVAAIVPK	8	Unmodified	_NVAAIVPK_					0	0	0			REV__ENSG00000127884|ENST00000368547|ECHS1	REV__ENSG00000127884|ENST00000368547|ECHS1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	406.255446	810.496338	0.25887	0.00010517	4.1575	0.001689	4.4164	0.0017942	406.2570424536752	48.047	0.7146	48.085	47.766	48.48	0.037731	-0.009755	-0.00014713	NaN	25.45	39	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	225620	+		39592	18752	26356	26368							0.08351007593989834
NVAAIVPK	8	Unmodified	_NVAAIVPK_					0	0	0			REV__ENSG00000127884|ENST00000368547|ECHS1	REV__ENSG00000127884|ENST00000368547|ECHS1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	406.255446	810.496338	-0.50818	-0.00020645	5.0447	0.0020494	4.5365	0.001843	406.25740876385663	48.071	0.68803	47.978	47.647	48.335	-0.093178	-0.11676	0.00057373	NaN	25.45	39	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	230840	+		39593	18752	26356	26368							0.08351007593989834
NVADVVIKF	9	Unmodified	_NVADVVIKF_					0	0	0		nc|ENSG00000118705|P04844-2|RPN2;ENSG00000118705|ENST00000237530|RPN2	nc|ENSG00000118705|P04844-2|RPN2	nc|ENSG00000118705|P04844-2|RPN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.792236328125	2	502.792392	1003.57023	-0.13337	-6.7055E-05	0.020934	1.0526E-05	-0.11243	-5.653E-05	502.79236760923754	69.031	3.1001	69.415	68.569	71.669	0.38416					132	78	5	0	0	0	0.0062975	6	7625	7577;7589;7601;7613;7625;7638		136.27	42.262	1	7134800			39594	3042	26357	26369	45086;45087;45088;45089;45090;45091	45090					0.06858930965665877
NVADVVIKF	9	Unmodified	_NVADVVIKF_					0	0	0		nc|ENSG00000118705|P04844-2|RPN2;ENSG00000118705|ENST00000237530|RPN2	nc|ENSG00000118705|P04844-2|RPN2	nc|ENSG00000118705|P04844-2|RPN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.7922668457031	2	502.792392	1003.57023	0.15965	8.0273E-05	-0.35742	-0.00017971	-0.19776	-9.9433E-05	502.79215795864644	68.923	2.5017	69.47	69.03	71.532	0.54693					119	63	4	0	0	0	5.5105E-05	5	7615	7591;7603;7615;7639;7651		148.99	50.357	1	7480000			39595	3042	26357	26369	45092;45093;45094;45095;45096	45094					0.06858930965665877
NVALIIPV	8	Unmodified	_NVALIIPV_					0	0	0			REV__ENSG00000085760|ENST00000263629|MTIF2	REV__ENSG00000085760|ENST00000263629|MTIF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.77349853515625	2	419.773471	837.53239	-1.4881	-0.00062466	3.7272	0.0015646	2.2391	0.00093993	419.7749808989393	41.299	2.3477	41.933	41.496	43.844	0.6339					157	60	5	0	0	0	0.82464	1	3583	3583		21.702	2.3424	1	184570000	+		39596	16897	26358	26370	45097	45097					0.10712464770858787
NVAVEPETLNA	11	Unmodified	_NVAVEPETLNA_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.7960815429688	2	578.79586	1155.57717	0.52293	0.00030267	0.09788	5.6653E-05	0.62081	0.00035932	578.7957507199366	35.107	0.91629	35.488	35.173	36.09	0.3812					59	23	3	0	0	0	0.61369	1	2675	2675		42.864	1.4377	1	802760			39597	14756	26359	26371	45098	45098					0.005601990555987868
NVAVGRPK	8	Unmodified	_NVAVGRPK_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7549133300781	2	420.756144	839.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.154	1	21.711	21.211	22.211	-0.44324								0	0	0	0.30252	1	869	869		19.36	1.0356	1		+		39598	23243	26360	26372	45099	45099					0.07156641682740883
NVDPVQHTY	9	Unmodified	_NVDPVQHTY_					0	0	0		ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN	ENSG00000188157|ENST00000379370|AGRN	ENSG00000188157|ENST00000379370|AGRN	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	536.756591796875	2	536.756538	1071.49852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.677	1	37.688	37.188	38.188	0.011173								0	0	0	0.094338	1	2528	2528		77.318	13.11	1				39599	7909	26361	26373	45100	45100					-0.03436608458855517
NVDQAFHEL	9	Unmodified	_NVDQAFHEL_					0	0	0		nc|ENSG00000133818|P62070-2|RRAS2;nc|ENSG00000133818|P62070-3|RRAS2;ENSG00000133818|ENST00000256196|RRAS2;nc|ENSG00000133818|P62070-4|RRAS2	nc|ENSG00000133818|P62070-2|RRAS2	nc|ENSG00000133818|P62070-2|RRAS2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	536.7564086914062	2	536.756538	1071.49852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.758	1	37.769	37.269	38.269	0.011173								0	0	0	0.27769	1	2539	2539		64.207	0	1				39600	3896	26362	26374	45101	45101					-0.03436608458855517
NVDSISNLGEA	11	Unmodified	_NVDSISNLGEA_					0	0	0			REV__ENSG00000160908|ENST00000337673|ZNF394	REV__ENSG00000160908|ENST00000337673|ZNF394	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.8239135742188	2	559.769842	1117.52513	0.10758	6.0222E-05	3.1169	0.0017447	3.2245	0.001805	559.7714085410095	81.572	0.8763	82.071	81.661	82.537	0.49967					36	21	2	0	0	0	0.17442	1	9466	9466		30.569	0.25114	1	248330	+		39601	20749	26363	26375	45102	45102					-0.028929643581932396
NVDVVQVK	8	Unmodified	_NVDVVQVK_					0	0	0			REV__ENST00000511044.1_1_5:141242715-141245657:-|nuORF	REV__ENST00000511044.1_1_5:141242715-141245657:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2506103515625	2	450.761092	899.507631	-1.2878	-0.00058048	0.91978	0.0004146	-0.36801	-0.00016588	450.76137784608466	31.626	0.46852	31.706	31.558	32.026	0.079834					19	10	3	0	0	0	0.4196	1	2140	2140		21.96	11.094	1	250600	+		39602	20486	26364	26376	45103	45103					0.05385784897475787
NVDVVQVK	8	Unmodified	_NVDVVQVK_					0	0	0			REV__ENST00000511044.1_1_5:141242715-141245657:-|nuORF	REV__ENST00000511044.1_1_5:141242715-141245657:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	450.761092	899.507631	-2.001	-0.00090198	7.6217	0.0034356	5.6207	0.0025336	450.7627798293687	31.846	0.14785	31.846	31.762	31.91	0	0.069904	0.0010893	NaN	20.947	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10341	+		39603	20486	26364	26376							0.05385784897475787
NVELDPEIQ	9	Unmodified	_NVELDPEIQ_					0	0	0		ENSG00000139648|ENST00000267119|KRT71;CON__Q3SY84;CON__Q9R0H5;nc|ENSG00000186049|Q86Y46-2|KRT73;ENSG00000170484|ENST00000305620|KRT74;CON__Q7RTS7;ENSG00000186049|ENST00000305748|KRT73;CON__Q32MB2;CON__Q6IME9;CON__Q6NXH9	ENSG00000139648|ENST00000267119|KRT71;CON__Q6IME9;CON__Q6NXH9	ENSG00000139648|ENST00000267119|KRT71	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.761962890625	2	528.764029	1055.5135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.38	1	61.368	60.868	61.868	-0.012203								0	0	0	0.07303	1	5697	5697		81.525	0	1			+	39604	621;627;629	26365	26377	45104	45104					-0.012031613815224773
NVELDPEIQ	9	Unmodified	_NVELDPEIQ_					0	0	0		ENSG00000139648|ENST00000267119|KRT71;CON__Q3SY84;CON__Q9R0H5;nc|ENSG00000186049|Q86Y46-2|KRT73;ENSG00000170484|ENST00000305620|KRT74;CON__Q7RTS7;ENSG00000186049|ENST00000305748|KRT73;CON__Q32MB2;CON__Q6IME9;CON__Q6NXH9	ENSG00000139648|ENST00000267119|KRT71;CON__Q6IME9;CON__Q6NXH9	ENSG00000139648|ENST00000267119|KRT71	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.763427734375	2	528.764029	1055.5135	0.61021	0.00032266	-1.9967	-0.0010558	-1.3865	-0.00073315	528.7628176407496	61.211	0.54707	61.179	60.81	61.357	-0.032509					45	25	2	0	0	0	0.059241	3	5785	5778;5785;5795		104.01	0	1	923610		+	39605	621;627;629	26365	26377	45105;45106;45107	45106					-0.012031613815224773
NVELDPEIQ	9	Unmodified	_NVELDPEIQ_					0	0	0		ENSG00000139648|ENST00000267119|KRT71;CON__Q3SY84;CON__Q9R0H5;nc|ENSG00000186049|Q86Y46-2|KRT73;ENSG00000170484|ENST00000305620|KRT74;CON__Q7RTS7;ENSG00000186049|ENST00000305748|KRT73;CON__Q32MB2;CON__Q6IME9;CON__Q6NXH9	ENSG00000139648|ENST00000267119|KRT71;CON__Q6IME9;CON__Q6NXH9	ENSG00000139648|ENST00000267119|KRT71	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.7649536132812	2	528.764029	1055.5135	-0.54581	-0.0002886	-0.74804	-0.00039554	-1.2938	-0.00068414	528.7635731768797	61.067	0.39808	61.098	60.808	61.206	0.031197					28	18	2	0	0	0	0.19861	2	5698	5692;5698		74.165	0	1	928450		+	39606	621;627;629	26365	26377	45108;45109	45109					-0.012031613815224773
NVELDPEIQ	9	Unmodified	_NVELDPEIQ_					0	0	0		ENSG00000139648|ENST00000267119|KRT71;CON__Q3SY84;CON__Q9R0H5;nc|ENSG00000186049|Q86Y46-2|KRT73;ENSG00000170484|ENST00000305620|KRT74;CON__Q7RTS7;ENSG00000186049|ENST00000305748|KRT73;CON__Q32MB2;CON__Q6IME9;CON__Q6NXH9	ENSG00000139648|ENST00000267119|KRT71;CON__Q6IME9;CON__Q6NXH9	ENSG00000139648|ENST00000267119|KRT71	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	528.764029	1055.5135	-1.1786	-0.00062318	0.25897	0.00013694	-0.91958	-0.00048624	528.7639533928459	61.175	0.19451	61.175	61.021	61.215	0	0.084688	0.0008752	NaN	104.01	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93036		+	39607	621;627;629	26365	26377							-0.012031613815224773
NVERSLSE	8	Unmodified	_NVERSLSE_					0	0	0		ENSG00000140836|ENST00000268489|ZFHX3;chr16:73456258-73680180|53|17.49|0.14|6.93|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73318336-73456003|47|12.38|0.07|7.55|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73257136-73318240|51|12.71|0.0|20.28|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73143831-73257047|49|21.06|0.1|7.71|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73131094-73143752|54|16.8|0.2|6.36|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73093598-73130968|46|12.0|0.08|7.25|-|ENST00000641206|ZFHX3,ZFHX3;nc|ENSG00000140836|Q15911-2|ZFHX3;chr16:72950965-73058530|60|21.05|0.31|6.07|-|ENST00000397992|ZFHX3,ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.103271484375	2	467.235439	932.456324	0.94079	0.00043957	-1.0146	-0.00047406	-0.073826	-3.4494E-05	467.2343637547982	20.017	0.54696	20.088	19.916	20.462	0.071127					25	21	2	0	0	0	0.4196	1	439	439		38.806	23.17	1	57423			39608	208	26366	26378	45110	45110					-0.012605838672357095
NVERSLSE	8	Unmodified	_NVERSLSE_					0	0	0		ENSG00000140836|ENST00000268489|ZFHX3;chr16:73456258-73680180|53|17.49|0.14|6.93|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73318336-73456003|47|12.38|0.07|7.55|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73257136-73318240|51|12.71|0.0|20.28|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73143831-73257047|49|21.06|0.1|7.71|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73131094-73143752|54|16.8|0.2|6.36|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73093598-73130968|46|12.0|0.08|7.25|-|ENST00000641206|ZFHX3,ZFHX3;nc|ENSG00000140836|Q15911-2|ZFHX3;chr16:72950965-73058530|60|21.05|0.31|6.07|-|ENST00000397992|ZFHX3,ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	467.235439	932.456324	-0.32295	-0.00015089	0.11623	5.4308E-05	-0.20671	-9.6584E-05	467.2348694677906	20.328	0.49118	20.258	20.031	20.522	-0.069735	0.084839	0.00054326	NaN	38.806	35	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58152			39609	208	26366	26378							-0.012605838672357095
NVFSSMIISE	10	Unmodified	_NVFSSMIISE_					0	0	0			REV__nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	REV__nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.7804565429688	2	563.776082	1125.53761	1.0624	0.00059895	2.9808	0.0016805	4.0432	0.0022795	563.7771928359884	25.681	0.52278	25.649	25.398	25.921	-0.032125					27	15	2	0	0	0	0.57924	1	1053	1053		51.193	14.746	1	68855	+		39610	16456	26367	26379	45111	45111					-0.020136442194825577
NVFVAANH	8	Unmodified	_NVFVAANH_					0	0	0		nc|ENSG00000114491|P11172-4|UMPS;nc|ENSG00000114491|P11172-2|UMPS;nc|ENSG00000114491|P11172-3|UMPS;ENSG00000114491|ENST00000232607|UMPS	nc|ENSG00000114491|P11172-4|UMPS	nc|ENSG00000114491|P11172-4|UMPS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.18682861328125	2	436.224677	870.434801	4.7501	0.0020721	3.4351	0.0014985	8.1852	0.0035706	436.2261380372715	107	0.46615	107.15	106.9	107.36	0.14929					21	12	2	0	0	0	0.4196	1	13052	13052		38.806	0	1	194630			39611	2775	26368	26380	45112	45112					-0.005599241053005244
NVGAERLL	8	Unmodified	_NVGAERLL_					0	0	0			REV__ENST00000580011.1_1_17:62082465-62082525:-|nuORF	REV__ENST00000580011.1_1_17:62082465-62082525:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.2563171386719	2	436.253434	870.492316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.81	1	117.84	117.34	118.34	0.026466								0	0	0	0.29596	1	12953	12953		35.618	10.168	1		+		39612	29036	26369	26381	45113	45113					0.051889181002820806
NVGDIVII	8	Unmodified	_NVGDIVII_					0	0	0		nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.75213623046875	2	421.752736	841.490919	-1.7818	-0.0007515	-1.2969	-0.00054696	-3.0787	-0.0012985	421.7522177518738	76.828	1.8707	76.953	75.249	77.12	0.12485					132	61	3	0	0	0	0.92457	1	7198	7198		47.916	3.7988	1	487030			39613	14888	26370	26382	45114	45114					0.06383284011531032
NVGDSNDK	8	Unmodified	_NVGDSNDK_					0	0	0			REV__ENSG00000102468|ENST00000542664|HTR2A	REV__ENSG00000102468|ENST00000542664|HTR2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.6917724609375	2	424.690864	847.367175	4.182	0.0017761	-2.6414	-0.0011218	1.5406	0.00065428	424.68991470869923	105.64	0.76003	105.83	105.36	106.12	0.18647					24	18	2	0	0	0	0.89962	1	12923	12923		38.806	8.3025	1	78861	+		39614	17342	26371	26383	45115	45115					-0.06261418826750287
NVGRFLII	8	Unmodified	_NVGRFLII_					0	0	0		ENST00000358582.8_1_19:38159870-38160044:-|nuORF	ENST00000358582.8_1_19:38159870-38160044:-|nuORF	ENST00000358582.8_1_19:38159870-38160044:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2888488769531	2	466.28982	930.565087	-0.11855	-5.5279E-05	0.27043	0.0001261	0.15188	7.0821E-05	466.2897602326147	74.173	1.0938	74.216	73.973	75.067	0.0429					90	43	3	0	0	0	0.9159	1	7119	7119		44.531	0.41427	1	860010			39615	10412	26372	26384	45116	45116					0.0970267189372862
NVGVRKIN	8	Unmodified	_NVGVRKIN_					0	0	0			REV__ENST00000285518.10_1_8:6615683-6615791:+|nuORF	REV__ENST00000285518.10_1_8:6615683-6615791:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2739562988281	2	450.274701	898.534849	1.3503	0.000608	-1.2216	-0.00055004	0.12873	5.7964E-05	450.2740515365266	114.53	1.1707	114.54	114.21	115.38	0.0094528					72	56	2	0	0	0	0.86288	1	13820	13820		26.796	1.3459	1	81332	+		39616	24634	26373	26385	45117	45117					0.08152313228515595
NVGYFWSIS	9	Unmodified	_NVGYFWSIS_					0	0	0			REV__ENSG00000157103|ENST00000287766|SLC6A1	REV__ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.7571411132812	2	536.758549	1071.50255	-0.28997	-0.00015564	-2.6228	-0.0014078	-2.9128	-0.0015635	536.7560248485332	37.771	0.7993	37.72	37.406	38.205	-0.050369					27	17	2	0	0	0	0.58151	1	2617	2617		47.916	1.9434	1	301410	+		39617	20527	26374	26386	45118	45118					-0.030345189651370674
NVHLIRFLRFL	11	Unmodified	_NVHLIRFLRFL_					0	0	0		ENSG00000165091|ENST00000297784|TMC1	ENSG00000165091|ENST00000297784|TMC1	ENSG00000165091|ENST00000297784|TMC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62322998046875	3	476.625984	1426.85612	-1.6911	-0.000806	-3.0916	-0.0014735	-4.7826	-0.0022795	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.76892	1	12826	12826		17.833	4.8757	1	2577100			39618	6043	26375	26387	45119	45119					0.1597699053877477
NVHVLRTG	8	Unmodified	_NVHVLRTG_					0	0	0		ENSG00000118246|ENST00000402774|FASTKD2;nc|ENSG00000118246|Q9NYY8-2|FASTKD2;ENST00000487777.5_1_2:207631381-207653673:+|nuORF	ENSG00000118246|ENST00000402774|FASTKD2	ENSG00000118246|ENST00000402774|FASTKD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.2585754394531	2	448.259051	894.503549	-1.3629	-0.00061094	1.4471	0.00064866	0.084131	3.7712E-05	448.2596556507269	89.763	2.6764	90.233	89.394	92.071	0.47068					116	66	2	0	0	0	0.884	1	10658	10658		33.516	1.5607	1	2268200			39619	3020	26376	26388	45120	45120					0.052077401944416124
NVIALQKVF	9	Unmodified	_NVIALQKVF_					0	0	0		ENSG00000155111|ENST00000368911|CDK19;nc|ENSG00000155111|Q9BWU1-2|CDK19	ENSG00000155111|ENST00000368911|CDK19	ENSG00000155111|ENST00000368911|CDK19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3131713867188	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12908	12908		17.365	0.89182	1	4038100			39620	5313	26377	26389	45121	45121					0.10343210236646883
NVICFIIAI	9	Unmodified	_NVICFIIAI_					0	0	0		ENST00000520817.5_1_8:41367533-41367725:+|nuORF	ENST00000520817.5_1_8:41367533-41367725:+|nuORF	ENST00000520817.5_1_8:41367533-41367725:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	503.7934265136719	2	503.293714	1004.57287	-1.6043	-0.00080741	-2.7622	-0.0013902	-4.3665	-0.0021976	503.29217405547223	109.68	1.349	109.69	109.36	110.71	0.0060425					102	50	3	0	0	0	0.77546	1	11694	11694		31.955	2.1133	1	1381900			39621	13161	26378	26390	45122	45122					0.07077063098961389
NVIEDKRK	8	Unmodified	_NVIEDKRK_					0	0	0		ENSG00000072818|ENST00000158762|ACAP1	ENSG00000072818|ENST00000158762|ACAP1	ENSG00000072818|ENST00000158762|ACAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29022216796875	2	501.290548	1000.56654	-0.064942	-3.2555E-05	-0.21369	-0.00010712	-0.27863	-0.00013967	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.91472	1	8433	8433		44.117	3.3386	1	2854100			39622	1283	26379	26391	45123	45123					0.06628261191804086
NVIENGNSNK	10	Unmodified	_NVIENGNSNK_					0	0	0		nc|ENSG00000177398|Q5DID0-3|UMODL1;ENSG00000177398|ENST00000408910|UMODL1;nc|ENSG00000177398|Q5DID0-4|UMODL1;nc|ENSG00000177398|Q5DID0-2|UMODL1;ENST00000400423.6_1_21:43540943-43557727:+|nuORF	nc|ENSG00000177398|Q5DID0-3|UMODL1	nc|ENSG00000177398|Q5DID0-3|UMODL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.7750854492188	2	544.770177	1087.5258	0.042753	2.3291E-05	3.2498	0.0017704	3.2925	0.0017937	544.7718741134504	33.745	0.49842	33.915	33.695	34.193	0.16971					25	11	3	0	0	0	0.2953	1	2447	2447		72.879	9.3454	1	422280			39623	7137	26380	26392	45124	45124					-0.014461249184705594
NVIGQGRLST	10	Unmodified	_NVIGQGRLST_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.7937622070312	2	522.793455	1043.57236	0.077043	4.0278E-05	-0.16914	-8.8425E-05	-0.092097	-4.8148E-05	522.7932298193799	22.078	0.91792	21.467	21.072	21.99	-0.6107					46	22	4	0	0	0	0.86587	1	892	892		29.17	1.2878	1	468110			39624	5428	26381	26393	45125	45125					0.05231359703475391
NVIHSVKRKN	10	Unmodified	_NVIHSVKRKN_					0	0	0		ENST00000468403.1_1_1:153751697-153752222:+|nuORF	ENST00000468403.1_1_1:153751697-153752222:+|nuORF	ENST00000468403.1_1_1:153751697-153752222:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8561401367188	2	597.856921	1193.69929	-0.56225	-0.00033615	-0.53243	-0.00031831	-1.0947	-0.00065446	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.85981	1	9527	9527		35.152	0.97948	1	2042000			39625	12177	26382	26394	45126	45126					0.11018705648461946
NVIHSVKRKN	10	Unmodified	_NVIHSVKRKN_					0	0	0		ENST00000468403.1_1_1:153751697-153752222:+|nuORF	ENST00000468403.1_1_1:153751697-153752222:+|nuORF	ENST00000468403.1_1_1:153751697-153752222:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8565673828125	2	597.856921	1193.69929	-0.56163	-0.00033577	-0.46706	-0.00027924	-1.0287	-0.00061501	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.86348	1	10031	10031		31.53	0	1	6282800			39626	12177	26382	26394	45127	45127					0.11018705648461946
NVIILPMN	8	Unmodified	_NVIILPMN_					0	0	0			REV__chr18:47156232-47176187|43|11.56|0.36|5.0|-|2|IER3IP1,IER3IP1|1	REV__chr18:47156232-47176187|43|11.56|0.36|5.0|-|2|IER3IP1,IER3IP1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2631530761719	2	457.262413	912.510274	-0.13162	-6.0186E-05	4.3904	0.0020076	4.2588	0.0019474	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.87922	1	7718	7718		31.955	1.4512	1	1194000	+		39627	15672	26383	26395	45128	45128					0.05051917030777986
NVIILPMN	8	Unmodified	_NVIILPMN_					0	0	0			REV__chr18:47156232-47176187|43|11.56|0.36|5.0|-|2|IER3IP1,IER3IP1|1	REV__chr18:47156232-47176187|43|11.56|0.36|5.0|-|2|IER3IP1,IER3IP1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2636413574219	2	457.262413	912.510274	0.52869	0.00024175	3.5661	0.0016306	4.0948	0.0018724	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.90465	1	8610	8610		40.573	1.7665	1	4885100	+		39628	15672	26383	26395	45129	45129					0.05051917030777986
NVIILPMN	8	Unmodified	_NVIILPMN_					0	0	0			REV__chr18:47156232-47176187|43|11.56|0.36|5.0|-|2|IER3IP1,IER3IP1|1	REV__chr18:47156232-47176187|43|11.56|0.36|5.0|-|2|IER3IP1,IER3IP1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2630920410156	2	457.262413	912.510274	0.57167	0.0002614	3.6646	0.0016757	4.2363	0.0019371	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.84341	1	7442	7442		24.203	0	1	1262800	+		39629	15672	26383	26395	45130	45130					0.05051917030777986
NVILKHTGRGI	11	Unmodified	_NVILKHTGRGI_					0	0	0		ENST00000479662.1_1_3:109190178-109190556:-|nuORF	ENST00000479662.1_1_3:109190178-109190556:-|nuORF	ENST00000479662.1_1_3:109190178-109190556:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3665161132812	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.69248	1	11490	11490		32.751	2.4328	1	63350000			39630	12415	26384	26396	45131	45131					0.12459876308275852
NVIRDAVTY	9	Unmodified	_NVIRDAVTY_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7821044921875	2	525.782556	1049.55056	-0.39034	-0.00020523	-0.91804	-0.00048269	-1.3084	-0.00068792	525.7822788118444	47.427	1.9803	47.899	47.175	49.155	0.47139					188	48	6	0	0	0	9.502000000000001E-29	22	4523	4440;4452;4463;4475;4487;4499;4511;4523;4535;4547;4559;4571;4583;4595;4607;4620;4632;4644;4657;4663;4683;4695		185.55	83.778	1	203960000			39631	5474	26385	26397	45132;45133;45134;45135;45136;45137;45138;45139;45140;45141;45142;45143;45144;45145;45146;45147;45148;45149;45150;45151;45152;45153	45139					0.027765549549030766
NVIRDAVTY	9	Unmodified	_NVIRDAVTY_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.781982421875	2	525.782556	1049.55056	0.2337	0.00012287	-0.57553	-0.00030261	-0.34184	-0.00017973	525.7820887503549	49.324	1.9584	49.783	49.143	51.102	0.45983					112	47	3	0	0	0	0.059135	8	4733	4706;4723;4733;4758;4770;4781;4793;4806		104.06	52.721	1	2060500			39632	5474	26385	26397	45154;45155;45156;45157;45158;45159;45160;45161	45156					0.027765549549030766
NVIRDAVTY	9	Unmodified	_NVIRDAVTY_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7822875976562	2	525.782556	1049.55056	-0.82593	-0.00043426	-0.43231	-0.0002273	-1.2582	-0.00066156	525.7825377389892	47.217	3.1081	48.14	47.695	50.803	0.92315					218	76	6	0	0	0	2.5218E-39	21	4525	4466;4477;4489;4501;4513;4525;4537;4549;4562;4573;4585;4598;4610;4622;4634;4648;4659;4673;4678;4691;4714		200.16	103.97	1	209990000			39633	5474	26385	26397	45162;45163;45164;45165;45166;45167;45168;45169;45170;45171;45172;45173;45174;45175;45176;45177;45178;45179;45180;45181;45182	45167					0.027765549549030766
NVIRDAVTY	9	Unmodified	_NVIRDAVTY_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	525.782556	1049.55056	-1.384	-0.00072767	1.4658	0.00077069	0.081813	4.3016E-05	525.7831044914375	48.065	0.53952	48.065	47.911	48.45	0	0.030305	0.0019795	NaN	200.16	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93339			39634	5474	26385	26397							0.027765549549030766
NVIRDAVTY	9	Unmodified	_NVIRDAVTY_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	525.782556	1049.55056	0.36729	0.00019311	-0.81788	-0.00043003	-0.45059	-0.00023691	525.7819290997181	49.657	0.6651	49.66	49.367	50.032	0.0035973	-0.011503	-0.00033314	NaN	104.06	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	215240			39635	5474	26385	26397							0.027765549549030766
NVIRDAVTY	9	Unmodified	_NVIRDAVTY_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	525.782556	1049.55056	-0.21129	-0.0001111	-0.52904	-0.00027816	-0.74034	-0.00038926	525.782306173577	49.673	0.53287	49.699	49.411	49.944	0.025574	0.026991	-2.9413E-05	NaN	104.06	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83666			39636	5474	26385	26397							0.027765549549030766
NVIRDAVTY	9	Unmodified	_NVIRDAVTY_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	525.782556	1049.55056	0.36731	0.00019312	-0.38227	-0.00020099	-0.014964	-7.8679E-06	525.7820253167189	49.704	0.4848	49.747	49.479	49.964	0.042236	0.074736	0.00012493	NaN	104.06	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113890			39637	5474	26385	26397							0.027765549549030766
NVIRDAVTY	9	Unmodified	_NVIRDAVTY_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	525.782556	1049.55056	-0.16906	-8.8891E-05	0.24296	0.00012775	0.073898	3.8854E-05	525.7827479866452	49.695	0.46309	49.602	49.38	49.844	-0.093182	-0.069878	0.0007824	NaN	104.06	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113890			39638	5474	26385	26397							0.027765549549030766
NVISTHGR	8	Unmodified	_NVISTHGR_					0	0	0			REV__nc|ENSG00000187260|Q86TI4-4|WDR86	REV__nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2419128417969	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.89494	1	7381	7381		37.159	6.6555	1	1094000	+		39639	30112	26386	26398	45183	45183					0.02122863297722688
NVIVDVQETAI	11	Unmodified	_NVIVDVQETAI_					0	0	0			REV__ENSG00000173200|ENST00000464300|PARP15	REV__ENSG00000173200|ENST00000464300|PARP15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8236083984375	2	600.82716	1199.63977	-0.59313	-0.00035637	-3.8147	-0.002292	-4.4078	-0.0026483	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.68532	1	6869	6869		33.922	5.8401	1	825510	+		39640	21900	26387	26399	45184	45184					0.04793345123766812
NVIVPVPMA	9	Unmodified	_NVIVPVPMA_					0	0	0			REV__ENSG00000131398|ENST00000477616|KCNC3;REV__nc|ENSG00000116396|Q03721|KCNC4	REV__nc|ENSG00000116396|Q03721|KCNC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.27215576171875	2	470.270238	938.525924	-0.1113	-5.2342E-05	4.1882	0.0019696	4.0769	0.0019172	470.27219532048343	92.361	2.6069	92.431	91.273	93.88	0.06987					140	61	4	0	0	0	0.77546	3	9563	9551;9563;9576		31.955	7.4508	1	1898400	+		39641	18950;29794	26388	26400	45185;45186;45187	45186					0.054202035478283506
NVIVPVPMA	9	Unmodified	_NVIVPVPMA_					0	0	0			REV__ENSG00000131398|ENST00000477616|KCNC3;REV__nc|ENSG00000116396|Q03721|KCNC4	REV__nc|ENSG00000116396|Q03721|KCNC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.2720947265625	2	470.270238	938.525924	0.099415	4.6752E-05	3.8545	0.0018127	3.9539	0.0018594	470.2720226453988	92.144	2.4368	92.19	91.141	93.578	0.045456					134	57	4	0	0	0	0.7932	1	9626	9626		24.203	2.2429	1	1955400	+		39642	18950;29794	26388	26400	45188	45188					0.054202035478283506
NVKAPLVPK	9	Unmodified	_NVKAPLVPK_					0	0	0			REV__ENST00000267811.9_1_15:57211003-57212096:+|nuORF	REV__ENST00000267811.9_1_15:57211003-57212096:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.26910400390625	2	483.310752	964.606951	-0.78805	-0.00038087	0.50577	0.00024444	-0.28228	-0.00013643	483.31095023472005	57.406	0.46941	57.8	57.574	58.043	0.39407					13	11	2	0	0	0	0.20789	1	5979	5979		27.882	0	1	140710	+		39643	24507	26389	26401	45189	45189					0.12323227582214713
NVKCQLLN	8	Unmodified	_NVKCQLLN_					0	0	0		ENSG00000133059|ENST00000367162|DSTYK;nc|ENSG00000133059|Q6XUX3-2|DSTYK;nc|ENSG00000133059|Q6XUX3-3|DSTYK	ENSG00000133059|ENST00000367162|DSTYK	ENSG00000133059|ENST00000367162|DSTYK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.25433349609375	2	466.25512	930.495686	-1.4812	-0.00069062	-0.75102	-0.00035017	-2.2322	-0.0010408	466.2546647596287	63.114	1.6104	63.114	62.32	63.93	0					124	75	2	0	0	0	0.86288	1	5529	5529		26.796	1.3459	1	225480			39644	3852	26390	26402	45190	45190					0.027658448826286985
NVKDSGVPNLH	11	Unmodified	_NVKDSGVPNLH_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.31005859375	2	590.309469	1178.60439	0.30484	0.00017995	-0.43313	-0.00025568	-0.12829	-7.5732E-05	590.3091273196425	32.679	0.65199	32.625	32.317	32.969	-0.054337					30	14	3	0	0	0	0.68532	1	1954	1954		33.922	1.1092	1	144860	+		39645	20278	26391	26403	45191	45191					0.022227273866064934
NVKFLPSDP	9	Unmodified	_NVKFLPSDP_					0	0	0		ENSG00000126870|ENST00000407559|DYNC2I1	ENSG00000126870|ENST00000407559|DYNC2I1	ENSG00000126870|ENST00000407559|DYNC2I1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7748718261719	2	508.7742	1015.53385	0.078364	3.9869E-05	-0.36941	-0.00018794	-0.29104	-0.00014808	508.7738658882094	51.548	0.66911	51.983	51.534	52.203	0.43505					33	15	3	0	0	0	0.51307	1	5114	5114		51.335	3.4199	1	685800			39646	3476	26392	26404	45192	45192					0.02670054068948957
NVKISPRKQ	9	Unmodified	_NVKISPRKQ_					0	0	0			REV__L1PA7_dup10097|chr11:121781424-121785258:-|1.4322006190095613|0.0265596336256901|5.75|58.0|88|3|sense	REV__L1PA7_dup10097|chr11:121781424-121785258:-|1.4322006190095613|0.0265596336256901|5.75|58.0|88|3|sense	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.6602783203125	2	535.327465	1068.64038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.71	1	111.82	111.32	112.32	0.11118								0	0	0	0.31828	1	12040	12040		24.203	1.1603	1		+		39647	29586	26393	26405	45193	45193					0.10880229354120274
NVKLQRILPQA	11	Unmodified	_NVKLQRILPQA_					0	0	0		ENST00000591584.1_1_17:40925493-40926039:+|nuORF	ENST00000591584.1_1_17:40925493-40926039:+|nuORF	ENST00000591584.1_1_17:40925493-40926039:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.8956298828125	2	640.395879	1278.7772	-0.69345	-0.00044408	-3.5831	-0.0022946	-4.2765	-0.0027387	640.3933606010097	53.872	1.0072	53.872	53.507	54.514	0					69	30	3	0	0	0	0.69995	1	4539	4539		31.53	4.8369	1	206080			39648	14276	26394	26406	45194	45194					0.1489671851386447
NVKREGNQPG	10	Unmodified	_NVKREGNQPG_					0	0	0			REV__ENSG00000168453|ENST00000381418|HR	REV__ENSG00000168453|ENST00000381418|HR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.7867431640625	2	549.786161	1097.55777	-0.5678	-0.00031217	2.0509	0.0011275	1.4831	0.00081538	549.7871709244522	110.43	1.0169	110.37	110.18	111.2	-0.055084					52	35	3	0	0	0	0.82886	1	12010	12010		37.812	2.6108	1	254500	+		39649	21489	26395	26407	45195	45195					0.012892875553234262
NVKRQTKSA	9	Unmodified	_NVKRQTKSA_					0	0	0			REV__ENST00000517540.5_1_8:93904251-93966702:-|nuORF	REV__ENST00000517540.5_1_8:93904251-93966702:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3011474609375	2	516.301447	1030.58834	-0.029363	-1.516E-05	-1.5847	-0.0008182	-1.6141	-0.00083336	516.3013663532613	57.234	1.5278	57.221	56.762	58.289	-0.012203					115	51	4	0	0	0	0.76764	1	5154	5154		34.173	1.3601	1	678400	+		39650	28046	26396	26408	45196	45196					0.07427065940373723
NVKRQTKSA	9	Unmodified	_NVKRQTKSA_					0	0	0			REV__ENST00000517540.5_1_8:93904251-93966702:-|nuORF	REV__ENST00000517540.5_1_8:93904251-93966702:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3015747070312	2	516.301447	1030.58834	-0.58657	-0.00030285	-1.0407	-0.00053731	-1.6273	-0.00084016	516.3016574074306	57.099	1.4441	57.132	56.795	58.239	0.033184					114	45	4	0	0	0	0.71772	1	5194	5194		39.253	5.0803	1	705170	+		39651	28046	26396	26408	45197	45197					0.07427065940373723
NVKSVTKH	8	Unmodified	_NVKSVTKH_					0	0	0		ENSG00000223547|ENST00000439326|ZNF844	ENSG00000223547|ENST00000439326|ZNF844	ENSG00000223547|ENST00000439326|ZNF844	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79302978515625	2	456.766709	911.518865	-0.054066	-2.4695E-05	-0.37902	-0.00017312	-0.43308	-0.00019782	456.7662926112703	36.478	0.35565	36.46	36.241	36.597	-0.018673					9	7	2	0	0	0	0.4196	1	2355	2355		51.335	14.176	1	27303			39652	8698	26397	26409	45198	45198					0.05956606991617264
NVKVLRDGT	9	Unmodified	_NVKVLRDGT_					0	0	0			REV__nc|ENSG00000275832|Q9P227-2|ARHGAP23	REV__nc|ENSG00000275832|Q9P227-2|ARHGAP23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904968261719	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.76764	1	8859	8859		34.173	0	1	9565500	+		39653	24014	26398	26410	45199	45199					0.06628261191792717
NVLCLIQK	8	Unmodified	_NVLCLIQK_					0	0	0			REV__nc|ENSG00000113971|Q7Z494-2|NPHP3	REV__nc|ENSG00000113971|Q7Z494-2|NPHP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7776184082031	2	465.775688	929.536823	-0.087401	-4.0709E-05	4.1075	0.0019132	4.0201	0.0018725	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.87922	1	8288	8288		31.955	0.42505	1	1330000	+		39654	18023	26399	26411	45200	45200					0.06923605922122533
NVLDGFLVF	9	Unmodified	_NVLDGFLVF_					0	0	0		nc|ENSG00000100346|Q9P0X4-2|CACNA1I;ENSG00000100346|ENST00000402142|CACNA1I;nc|ENSG00000100346|Q9P0X4-3|CACNA1I;nc|ENSG00000100346|Q9P0X4-4|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.2816772460938	2	512.279118	1022.54368	0.68771	0.0003523	3.6398	0.0018646	4.3276	0.0022169	512.280910573943	86.397	3.3825	86.546	85.297	88.68	0.14902					148	79	2	0	0	0	0.72402	1	8596	8596		38.806	3.1879	1	371240			39655	1830	26400	26412	45201	45201					0.03331242074330021
NVLDLRQN	8	Unmodified	_NVLDLRQN_					0	0	0		nc|ENSG00000134369|Q8NEY1-7|NAV1;nc|ENSG00000134369|Q8NEY1-4|NAV1;nc|ENSG00000134369|Q8NEY1-2|NAV1;nc|ENSG00000134369|Q8NEY1-3|NAV1;nc|ENSG00000134369|Q8NEY1|NAV1;ENSG00000134369|ENST00000685211|NAV1;nc|ENSG00000134369|Q8NEY1-6|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	nc|ENSG00000134369|Q8NEY1-7|NAV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.2663879394531	2	486.267073	970.519593	0.080189	3.8993E-05	-0.13772	-6.6968E-05	-0.057528	-2.7974E-05	486.2668793256364	86.146	4.4086	86.59	84.867	89.275	0.44331					281	107	4	0	0	0	0.88185	1	10264	10264		32.812	2.4947	1	1279400			39656	3931	26401	26413	45202	45202					0.03315401640657001
NVLDLVANY	9	Unmodified	_NVLDLVANY_					0	0	0			REV__ENSG00000165661|ENST00000358701|QSOX2	REV__ENSG00000165661|ENST00000358701|QSOX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.77166748046875	2	510.771657	1019.52876	-0.054481	-2.7827E-05	0.37788	0.00019301	0.3234	0.00016518	510.77161955919803	71.85	0.62404	71.887	71.636	72.26	0.037148					45	23	3	0	0	0	0.64555	2	6834	6827;6834		44.377	5.571	1	215000	+		39657	21203	26402	26414	45203;45204	45204					0.01977750206322071
NVLFNPYL	8	Unmodified	_NVLFNPYL_					0	0	0			REV__nc|ENSG00000143207|Q8NHY2-2|COP1	REV__nc|ENSG00000143207|Q8NHY2-2|COP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.2666320800781	2	490.26601	978.517468	0.64647	0.00031694	4.0877	0.002004	4.7341	0.002321	490.26800757881944	83.964	3.3049	84.112	83.013	86.318	0.14793					138	76	2	0	0	0	0.87922	1	8231	8231		31.955	2.8053	1	246750	+		39658	19783	26403	26415	45205	45205					0.027349729028628644
NVLGPVLGKRR	11	Unmodified	_NVLGPVLGKRR_					0	0	0			REV__ENSG00000135093|ENST00000257548|USP30	REV__ENSG00000135093|ENST00000257548|USP30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8824462890625	2	604.882939	1207.75132	3.1962	0.0019333	-4.0737	-0.0024641	-0.87746	-0.00053076	604.8801554490542	103.49	1.0678	103.45	103.16	104.23	-0.043755					63	25	5	0	0	0	0.79294	1	11346	11346		12.812	1.9462	1	585280	+		39659	19192	26404	26416	45206	45206					0.15575869062217862
NVLGTELL	8	Unmodified	_NVLGTELL_					0	0	0			REV__nc|ENSG00000061987|Q7Z3U7-2|MON2	REV__nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.7502136230469	2	429.750193	857.485833	-1.7334	-0.00074493	0.77902	0.00033479	-0.95437	-0.00041014	429.7503701051042	40.361	2.4974	40.367	40.029	42.526	0.0065002					186	77	3	0	0	0	0.86791	1	2591	2591		28.254	0	1	3826800	+		39660	16458	26405	26417	45207	45207					0.05138980148910832
NVLGTELL	8	Unmodified	_NVLGTELL_					0	0	0			REV__nc|ENSG00000061987|Q7Z3U7-2|MON2	REV__nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.74951171875	2	429.750193	857.485833	-1.2651	-0.00054369	0.44911	0.000193	-0.81601	-0.00035068	429.7502304021701	40.953	2.5169	41.587	40.841	43.358	0.6339					165	67	3	0	0	0	0.89457	1	3543	3543		37.028	0	1	8697100	+		39661	16458	26405	26417	45208	45208					0.05138980148910832
NVLHKLYILNI	11	Unmodified	_NVLHKLYILNI_					0	0	0		chr14:60457095-60458678|34|13.59|0.4|5.09|-|1|C14orf39,C14orf39|2	chr14:60457095-60458678|34|13.59|0.4|5.09|-|1|C14orf39,C14orf39|2	chr14:60457095-60458678|34|13.59|0.4|5.09|-|1|C14orf39,C14orf39|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2729797363281	3	447.274729	1338.80236	-1.2893	-0.00057667	-3.0438	-0.0013614	-4.3331	-0.0019381	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.71803	1	11418	11418		28.577	3.509	1	31263000			39662	173	26406	26418	45209	45209					0.14650773316429877
NVLIEVNPQTR	11	Unmodified	_NVLIEVNPQTR_					0	0	0		ENSG00000126749|ENST00000599672|EMG1	ENSG00000126749|ENST00000599672|EMG1	ENSG00000126749|ENST00000599672|EMG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8602294921875	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.638	2	12793	12793;13065		40.058	5.8856	1	27133000			39663	3463	26407	26419	45210;45211	45210					0.07451545000549231
NVLIIMITT	9	Unmodified	_NVLIIMITT_					0	0	0		ENSG00000196772|ENST00000641093|OR14A16	ENSG00000196772|ENST00000641093|OR14A16	ENSG00000196772|ENST00000641093|OR14A16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.305908203125	2	509.304278	1016.594	-0.80877	-0.00041191	3.9291	0.0020011	3.1203	0.0015892	509.30614096875837	93.406	1.6722	93.406	92.938	94.61	0					114	38	4	0	0	0	0.74721	1	9230	9230		37.159	1.5408	1	1703100			39664	8100	26408	26420	45212	45212					0.08637028407815706
NVLIIMITT	9	Unmodified	_NVLIIMITT_					0	0	0		ENSG00000196772|ENST00000641093|OR14A16	ENSG00000196772|ENST00000641093|OR14A16	ENSG00000196772|ENST00000641093|OR14A16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.3057556152344	2	509.304278	1016.594	1.9599	0.00099817	0.96597	0.00049197	2.9258	0.0014901	509.30464157571356	93.196	1.6755	93.134	92.591	94.267	-0.06144					130	39	5	0	0	0	0.74721	1	9887	9887		37.159	1.5408	1	3032400			39665	8100	26408	26420	45213	45213					0.08637028407815706
NVLIIMITT	9	Unmodified	_NVLIIMITT_					0	0	0		ENSG00000196772|ENST00000641093|OR14A16	ENSG00000196772|ENST00000641093|OR14A16	ENSG00000196772|ENST00000641093|OR14A16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.3056945800781	2	509.304278	1016.594	0.74223	0.00037802	2.3317	0.0011875	3.0739	0.0015656	509.305324720209	92.968	1.4156	93.127	92.667	94.082	0.15875					103	33	4	0	0	0	0.7932	1	9418	9418		21.96	1.9631	1	2131200			39666	8100	26408	26420	45214	45214					0.08637028407815706
NVLIIQIYSA	10	Unmodified	_NVLIIQIYSA_					0	0	0			REV__ENST00000486143.1_1_3:36422177-36500751:+|nuORF	REV__ENST00000486143.1_1_3:36422177-36500751:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3307495117188	2	567.331882	1132.64921	0.48094	0.00027285	-3.8594	-0.0021896	-3.3785	-0.0019167	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.86348	1	8864	8864		31.53	5.9558	1	6590100	+		39667	27539	26409	26421	45215	45215					0.0881915819995811
NVLKKFICISD	11	Unmodified	_NVLKKFICISD_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8;ENST00000575116.1_1_17:1555319-1557183:-|nuORF;ENST00000576585.1_1_17:1556769-1557303:-|nuORF	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3594970703125	2	640.357573	1278.70059	-0.067952	-4.3514E-05	2.0877	0.0013369	2.0198	0.0012934	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.7144	1	10698	10698		29.17	1.0886	1	640120			39668	6918	26410	26422	45216	45216					0.07239158902348208
NVLKLLFS	8	Unmodified	_NVLKLLFS_					0	0	0			REV__ENSG00000023839|ENST00000647814|ABCC2	REV__ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.290283203125	2	467.292028	932.569503	0.59956	0.00028017	-3.8725	-0.0018096	-3.273	-0.0015294	467.29008476451924	33.209	0.96325	33.421	33.102	34.066	0.21168					61	22	4	0	0	0	0.88601	1	2378	2378		34.173	5.023	1	3366300	+		39669	16253	26411	26423	45217	45217					0.10052136316630822
NVLLELLI	8	Unmodified	_NVLLELLI_					0	0	0			REV__ENST00000361271.7_1_10:17636302-17641322:-|nuORF	REV__ENST00000361271.7_1_10:17636302-17641322:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8005065917969	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.81724	1	2987	2987		14.664	1.7049	1	1231300	+		39670	25497	26412	26424	45218	45218					0.11905003113827206
NVLLKIAEH	9	Unmodified	_NVLLKIAEH_					0	0	0			REV__ENSG00000158796|ENST00000368006|DEDD	REV__ENSG00000158796|ENST00000368006|DEDD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8110961914062	2	518.811116	1035.60768	2.0617	0.0010696	-3.6499	-0.0018936	-1.5882	-0.00082399	518.8091991124401	100.03	1.7649	100.37	99.779	101.54	0.34591					151	44	5	0	0	0	0.28163	1	12138	12138		66.429	0.6261	1	18229000	+		39671	20621	26413	26425	45219	45219					0.09130022231261137
NVLLKIAEH	9	Unmodified	_NVLLKIAEH_					0	0	0			REV__ENSG00000158796|ENST00000368006|DEDD	REV__ENSG00000158796|ENST00000368006|DEDD	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	518.811116	1035.60768	-0.65442	-0.00033952	-1.0396	-0.00053937	-1.694	-0.00087889	518.8104753879901	100.63	0.62064	100.63	100.37	100.99	0	0.077377	0.0016574	NaN	66.429	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93974	+		39672	20621	26413	26425							0.09130022231261137
NVLLKIAEH	9	Unmodified	_NVLLKIAEH_					0	0	0			REV__ENSG00000158796|ENST00000368006|DEDD	REV__ENSG00000158796|ENST00000368006|DEDD	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	518.811116	1035.60768	-0.044769	-2.3227E-05	-1.2303	-0.00063831	-1.2751	-0.00066153	518.8103244884296	100.82	1.3243	100.86	100.17	101.49	0.031036	0.29822	0.0014595	NaN	66.429	64	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1494000	+		39673	20621	26413	26425							0.09130022231261137
NVLLKIAEH	9	Unmodified	_NVLLKIAEH_					0	0	0			REV__ENSG00000158796|ENST00000368006|DEDD	REV__ENSG00000158796|ENST00000368006|DEDD	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	518.811116	1035.60768	2.9632	0.0015374	-4.2321	-0.0021957	-1.2689	-0.00065832	518.8088419306054	100.71	1.1357	100.66	100.27	101.4	-0.052116	0.10183	-0.0016552	NaN	66.429	72	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1463000	+		39674	20621	26413	26425							0.09130022231261137
NVLLKIAEH	9	Unmodified	_NVLLKIAEH_					0	0	0			REV__ENSG00000158796|ENST00000368006|DEDD	REV__ENSG00000158796|ENST00000368006|DEDD	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	518.811116	1035.60768	1.0739	0.00055717	-2.2569	-0.0011709	-1.1829	-0.00061371	518.8097845570878	100.54	1.1401	100.59	100.16	101.3	0.046356	0.029036	0.00039439	NaN	66.429	69	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1506300	+		39675	20621	26413	26425							0.09130022231261137
NVLLKIAEH	9	Unmodified	_NVLLKIAEH_					0	0	0			REV__ENSG00000158796|ENST00000368006|DEDD	REV__ENSG00000158796|ENST00000368006|DEDD	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	518.811116	1035.60768	-0.21997	-0.00011412	-1.2094	-0.00062746	-1.4294	-0.00074158	518.8103530642351	100.26	1.3102	100.48	99.777	101.09	0.21512	-0.07726	0.0014812	NaN	66.429	71	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1611000	+		39676	20621	26413	26425							0.09130022231261137
NVLMVPKP	8	Oxidation (M)	_NVLM(Oxidation (M))VPKP_		NVLM(1)VPKP		NVLM(56)VPKP	0	0	1		ENSG00000004939|ENST00000262418|SLC4A1;nc|ENSG00000004939|P02730-2|SLC4A1	ENSG00000004939|ENST00000262418|SLC4A1	ENSG00000004939|ENST00000262418|SLC4A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.263427734375	2	457.262413	912.510274	-0.11988	-5.4815E-05	4.329	0.0019795	4.2091	0.0019247	457.26428644836	79.385	2.7838	79.935	78.442	81.226	0.54945					170	65	4	0	0	0	0.9295	1	9137	9137		55.504	14.726	1	1064700			39677	668	26414	26426	45220	45220					0.050519170307893546
NVLPGFPK	8	Unmodified	_NVLPGFPK_					0	0	0		ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1	ENSG00000009694|ENST00000371130|TENM1	ENSG00000009694|ENST00000371130|TENM1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.2564392089844	2	436.255446	870.496338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.01	1	110.14	109.64	110.64	0.12289								0	0	0	0.29755	1	11834	11834		24.203	2.5004	1				39678	755	26415	26427	45221	45221					0.05591007593989161
NVLPLLKFHSA	11	Unmodified	_NVLPLLKFHSA_					0	0	0			REV__ENST00000585451.5_1_2:179388231-179625684:+|nuORF	REV__ENST00000585451.5_1_2:179388231-179625684:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.869384765625	2	619.866423	1237.71829	2.0624	0.0012784	2.5108	0.0015564	4.5732	0.0028348	619.8678492982955	94.196	2.767	94.137	92.294	95.061	-0.059212					208	65	4	0	0	0	0.75164	1	10116	10116		21.686	0	1	2061200	+		39679	29090	26416	26428	45222	45222					0.1089424221952413
NVLPLLKFHSA	11	Unmodified	_NVLPLLKFHSA_					0	0	0			REV__ENST00000585451.5_1_2:179388231-179625684:+|nuORF	REV__ENST00000585451.5_1_2:179388231-179625684:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8694458007812	2	619.866423	1237.71829	2.311	0.0014325	2.5285	0.0015673	4.8395	0.0029999	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.72739	1	10190	10190		27.047	0.3544	1	4854700	+		39680	29090	26416	26428	45223	45223					0.1089424221952413
NVLPLLKFHSA	11	Unmodified	_NVLPLLKFHSA_					0	0	0			REV__ENST00000585451.5_1_2:179388231-179625684:+|nuORF	REV__ENST00000585451.5_1_2:179388231-179625684:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8701782226562	2	619.866423	1237.71829	0.87763	0.00054401	3.9959	0.0024769	4.8735	0.0030209	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.7434	1	10067	10067		23.523	1.5628	1	6574700	+		39681	29090	26416	26428	45224	45224					0.1089424221952413
NVLPLLKFHSA	11	Unmodified	_NVLPLLKFHSA_					0	0	0			REV__ENST00000585451.5_1_2:179388231-179625684:+|nuORF	REV__ENST00000585451.5_1_2:179388231-179625684:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.86962890625	2	619.866423	1237.71829	1.2588	0.00078029	3.961	0.0024553	5.2198	0.0032356	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.69248	1	11552	11552		32.751	2.2469	1	4742500	+		39682	29090	26416	26428	45225	45225					0.1089424221952413
NVLPPLIVQN	10	Unmodified	_NVLPPLIVQN_					0	0	0			REV__ENST00000222584.7_1_7:21469183-21469285:+|nuORF	REV__ENST00000222584.7_1_7:21469183-21469285:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8303833007812	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.86763	1	8626	8626		26.693	0	1	1181400	+		39683	24164	26417	26429	45226	45226					0.10094577919812764
NVLPPLIVQN	10	Unmodified	_NVLPPLIVQN_					0	0	0			REV__ENST00000222584.7_1_7:21469183-21469285:+|nuORF	REV__ENST00000222584.7_1_7:21469183-21469285:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8306274414062	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.86718	1	9491	9491		27.882	3.3631	1	5219600	+		39684	24164	26417	26429	45227	45227					0.10094577919812764
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.29058837890625	2	501.290548	1000.56654	-0.9424	-0.00047241	0.84818	0.00042518	-0.094216	-4.7229E-05	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.69624	2	8245	8245;8382		40.778	6.6056	1	6939200			39685	15012	26418	26430	45228;45229	45228					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29058837890625	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.69624	2	8602	8602;8679		40.778	1.5253	1	9565500			39686	15012	26418	26430	45230;45231	45230					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29022216796875	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.51592	2	8766	8766;8789		51.193	14.746	1	2850500			39687	15012	26418	26430	45232;45233	45232					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904052734375	2	501.290548	1000.56654	-0.36653	-0.00018374	0.15869	7.9552E-05	-0.20784	-0.00010419	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.77696	2	8717	8670;8717		31.53	3.1702	1	9903700			39688	15012	26418	26430	45234;45235	45235					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2901611328125	2	501.290548	1000.56654	-0.50774	-0.00025453	0.15503	7.7713E-05	-0.35272	-0.00017681	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.6204	1	8152	8152		45.972	5.1941	1	3014100			39689	15012	26418	26430	45236	45236					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2903747558594	2	501.290548	1000.56654	-0.50311	-0.0002522	0.25574	0.0001282	-0.24737	-0.000124	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.73802	1	8681	8681		37.812	1.3648	1	10459000			39690	15012	26418	26430	45237	45237					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2900085449219	2	501.290548	1000.56654	0.65622	0.00032896	-1.0593	-0.000531	-0.40304	-0.00020204	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.58668	1	8164	8164		47.657	6.8792	1	2931000			39691	15012	26418	26430	45238	45238					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904357910156	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.6204	2	8752	8752;8801		45.972	8.8131	1	9566900			39692	15012	26418	26430	45239;45240	45239					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2904968261719	2	501.290548	1000.56654	-1.4828	-0.00074334	1.1379	0.00057041	-0.34496	-0.00017293	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.6204	1	8110	8110		45.972	4.5456	1	2793500			39693	15012	26418	26430	45241	45241					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2904357910156	2	501.290548	1000.56654	-1.5697	-0.00078686	1.3648	0.00068414	-0.20492	-0.00010273	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.54908	3	8701	8397;8663;8701		49.536	8.6634	1	9242300			39694	15012	26418	26430	45242;45243;45244	45244					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2902526855469	2	501.290548	1000.56654	-0.86867	-0.00043546	0.96116	0.00048182	0.092492	4.6365E-05	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.64555	3	9897	9735;9873;9897		44.377	5.1244	1	2445400			39695	15012	26418	26430	45245;45246;45247	45247					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2903747558594	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.28163	4	10123	9969;10123;10135;10279		66.429	8.1994	1	9038000			39696	15012	26418	26430	45248;45249;45250;45251	45249					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29046630859375	2	501.290548	1000.56654	0.16565	8.304E-05	-0.064258	-3.2212E-05	0.10139	5.0828E-05	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.58668	4	9906	9835;9896;9906;9930		47.657	11.371	1	2717900			39697	15012	26418	26430	45252;45253;45254;45255	45254					0.06628261191804086
NVLQRTLSA	9	Unmodified	_NVLQRTLSA_					0	0	0		nc|ENSG00000156313|Q92834|RPGR;nc|ENSG00000156313|Q92834-5|RPGR;nc|ENSG00000156313|Q92834-3|RPGR;nc|ENSG00000156313|Q92834-2|RPGR;ENSG00000156313|ENST00000645032|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2901611328125	2	501.290548	1000.56654	-0.45423	-0.0002277	0.14645	7.3413E-05	-0.30779	-0.00015429	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.55097	3	10336	10324;10336;10373		49.442	5.1599	1	9727400			39698	15012	26418	26430	45256;45257;45258	45257					0.06628261191804086
NVLRRDLKPQ	10	Unmodified	_NVLRRDLKPQ_					0	0	0		ENST00000442838.2_1_8:123781530-123781986:+|nuORF	ENST00000442838.2_1_8:123781530-123781986:+|nuORF	ENST00000442838.2_1_8:123781530-123781986:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.869140625	2	619.870028	1237.7255	-0.30632	-0.00018988	-0.95589	-0.00059253	-1.2622	-0.00078241	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.86587	1	9768	9768		29.17	0	1	2103100			39699	11797	26419	26431	45259	45259					0.11614974819917734
NVLSILPMA	9	Unmodified	_NVLSILPMA_					0	0	0			REV__ENSG00000117528|ENST00000370214|ABCD3	REV__ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2773742675781	2	479.275521	956.536489	0.83201	0.00039876	3.0426	0.0014583	3.8747	0.001857	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.76255	1	8710	8710		35.618	2.8059	1	7289200	+		39700	18268	26420	26432	45260	45260					0.05648186202256511
NVLSILPMA	9	Unmodified	_NVLSILPMA_					0	0	0			REV__ENSG00000117528|ENST00000370214|ABCD3	REV__ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2778625488281	2	479.275521	956.536489	0.63867	0.0003061	3.2635	0.0015641	3.9021	0.0018702	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.72402	4	8589	8062;8306;8536;8589		38.806	6.5699	1	6593200	+		39701	18268	26420	26432	45261;45262;45263;45264	45264					0.05648186202256511
NVLSILPMA	9	Unmodified	_NVLSILPMA_					0	0	0			REV__ENSG00000117528|ENST00000370214|ABCD3	REV__ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2776184082031	2	479.275521	956.536489	0.28639	0.00013726	3.6814	0.0017644	3.9678	0.0019017	479.27712266759204	81.87	2.8073	82.296	80.642	83.45	0.42646					178	68	3	0	0	0	0.78058	1	9494	9494		30.504	1.3541	1	1790000	+		39702	18268	26420	26432	45265	45265					0.05648186202256511
NVLSILPMA	9	Unmodified	_NVLSILPMA_					0	0	0			REV__ENSG00000117528|ENST00000370214|ABCD3	REV__ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2777099609375	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.55097	1	10041	10041		49.442	12.282	1	5642300	+		39703	18268	26420	26432	45266	45266					0.05648186202256511
NVLSRHGG	8	Unmodified	_NVLSRHGG_					0	0	0			REV__ENSG00000075213|ENST00000265362|SEMA3A	REV__ENSG00000075213|ENST00000265362|SEMA3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2275085449219	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.89494	1	7254	7254		37.159	1.5408	1	419890	+		39704	16703	26421	26433	45267	45267					0.015265941262441629
NVLSRHGG	8	Unmodified	_NVLSRHGG_					0	0	0			REV__ENSG00000075213|ENST00000265362|SEMA3A	REV__ENSG00000075213|ENST00000265362|SEMA3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.2272033691406	2	420.227751	838.440949	0.042435	1.7832E-05	0.092754	3.8978E-05	0.13519	5.681E-05	420.2277069932212	78.969	5.8282	79.518	76.332	82.16	0.54945					273	145	3	0	0	0	0.90465	1	8954	8954		40.573	7.057	1	581780	+		39705	16703	26421	26433	45268	45268					0.015265941262441629
NVLTKSLSKDS	11	Unmodified	_NVLTKSLSKDS_					0	0	0		ENSG00000151320|ENST00000280979|AKAP6	ENSG00000151320|ENST00000280979|AKAP6	ENSG00000151320|ENST00000280979|AKAP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.3326416015625	2	596.33261	1190.65067	0.92114	0.00054931	-0.45114	-0.00026903	0.47	0.00028028	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.62614	1	9810	9810		41.427	2.1738	1	1402200			39706	5107	26422	26434	45269	45269					0.06296747498072364
NVLTKSLSKDS	11	Unmodified	_NVLTKSLSKDS_					0	0	0		ENSG00000151320|ENST00000280979|AKAP6	ENSG00000151320|ENST00000280979|AKAP6	ENSG00000151320|ENST00000280979|AKAP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.3328857421875	2	596.33261	1190.65067	0.85589	0.0005104	-0.38091	-0.00022715	0.47498	0.00028325	596.3322598839247	96.043	3.1049	96.206	95.311	98.416	0.16316					228	72	4	0	0	0	0.66009	1	9932	9932		37.508	1.0614	1	1469100			39707	5107	26422	26434	45270	45270					0.06296747498072364
NVLTKSLSKDS	11	Unmodified	_NVLTKSLSKDS_					0	0	0		ENSG00000151320|ENST00000280979|AKAP6	ENSG00000151320|ENST00000280979|AKAP6	ENSG00000151320|ENST00000280979|AKAP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.3328857421875	2	596.33261	1190.65067	-1.3013	-0.00077598	1.7378	0.0010363	0.4365	0.0002603	596.3335316328556	96.129	3.5172	96.331	95.353	98.87	0.20242					227	81	4	0	0	0	0.66929	2	9914	9914;9977		36.447	6.129	1	1353000			39708	5107	26422	26434	45271;45272	45271					0.06296747498072364
NVLTKSLSKDS	11	Unmodified	_NVLTKSLSKDS_					0	0	0		ENSG00000151320|ENST00000280979|AKAP6	ENSG00000151320|ENST00000280979|AKAP6	ENSG00000151320|ENST00000280979|AKAP6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.3333129882812	2	596.33261	1190.65067	1.5761	0.00093988	-0.99339	-0.00059239	0.58272	0.00034749	596.3318720869813	95.913	2.9437	96.333	95.271	98.215	0.4205					211	71	4	0	0	0	0.67778	1	11462	11462		35.152	0	1	1079900			39709	5107	26422	26434	45273	45273					0.06296747498072364
NVLTKSLSKDS	11	Unmodified	_NVLTKSLSKDS_					0	0	0		ENSG00000151320|ENST00000280979|AKAP6	ENSG00000151320|ENST00000280979|AKAP6	ENSG00000151320|ENST00000280979|AKAP6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3331298828125	2	596.33261	1190.65067	0.54724	0.00032634	0.085954	5.1257E-05	0.63319	0.00037759	596.3325172883492	95.985	3.4694	96.39	95.216	98.686	0.40451					232	84	4	0	0	0	0.62614	2	11494	11494;11512		41.427	4.9799	1	1225200			39710	5107	26422	26434	45274;45275	45274					0.06296747498072364
NVLTSKRVG	9	Unmodified	_NVLTSKRVG_					0	0	0		nc|ENSG00000214595|Q6ZMW3-2|EML6;ENSG00000214595|ENST00000356458|EML6	nc|ENSG00000214595|Q6ZMW3-2|EML6	nc|ENSG00000214595|Q6ZMW3-2|EML6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.29290771484375	2	487.293091	972.571629	1.5746	0.00076728	-1.3519	-0.00065877	0.22268	0.00010851	487.2923164445536	91.172	2.4399	91.105	90.562	93.002	-0.067093					137	58	3	0	0	0	0.7932	1	9554	9554		25.574	1.3713	1	2352400			39711	15250	26423	26435	45276	45276					0.08424565054428967
NVLTSKRVG	9	Unmodified	_NVLTSKRVG_					0	0	0		nc|ENSG00000214595|Q6ZMW3-2|EML6;ENSG00000214595|ENST00000356458|EML6	nc|ENSG00000214595|Q6ZMW3-2|EML6	nc|ENSG00000214595|Q6ZMW3-2|EML6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.2928161621094	2	487.293091	972.571629	-1.2737	-0.00062065	1.3409	0.00065343	0.06726	3.2776E-05	487.2936158611297	90.804	1.4266	91.275	90.816	92.243	0.47068					98	34	4	0	0	0	0.69624	1	10800	10800		40.778	0	1	1668500			39712	15250	26423	26435	45277	45277					0.08424565054428967
NVLVGGIKM	9	Unmodified	_NVLVGGIKM_					0	0	0			REV__nc|ENSG00000159267|P50747|HLCS	REV__nc|ENSG00000159267|P50747|HLCS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7779846191406	2	465.775688	929.536823	-0.1189	-5.538E-05	4.3164	0.0020105	4.1975	0.0019551	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.74721	1	7786	7786		37.159	1.9584	1	345200	+		39713	20650	26424	26436	45278	45278					0.06923605922111165
NVLVHSMGP	9	Unmodified	_NVLVHSMGP_					0	0	0			REV__ENST00000469753.5_1_2:46300785-46301094:+|nuORF	REV__ENST00000469753.5_1_2:46300785-46301094:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.24713134765625	2	477.247295	952.480036	0.42784	0.00020419	-2.0067	-0.00095767	-1.5788	-0.00075348	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.69624	1	6974	6974		40.778	0.20554	1	2278400	+		39714	27199	26425	26437	45279	45279					0.0018955836560508033
NVLVLAYLHQL	11	Unmodified	_NVLVLAYLHQL_					0	0	0			REV__ENSG00000182492|ENST00000331595|BGN	REV__ENSG00000182492|ENST00000331595|BGN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8820190429688	2	641.87953	1281.74451	1.5937	0.0010229	2.8364	0.0018207	4.4301	0.0028436	641.8811997248309	95.576	2.5829	95.807	94.242	96.825	0.23103					208	61	4	0	0	0	0.70737	1	9763	9763		30.318	2.2362	1	2238900	+		39715	22527	26426	26438	45280	45280					0.11490511391002656
NVLVLIAP	8	Unmodified	_NVLVLIAP_					0	0	0			REV__ENSG00000170099|ENST00000341584|SERPINA6	REV__ENSG00000170099|ENST00000341584|SERPINA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7751159667969	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.81724	1	3416	3416		14.664	0	1	10965000	+		39716	21630	26427	26439	45281	45281					0.10712464770858787
NVLVLLPHTG	10	Unmodified	_NVLVLLPHTG_					0	0	0			REV__ENST00000480809.5_1_3:185925300-186038248:-|nuORF	REV__ENST00000480809.5_1_3:185925300-186038248:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8167724609375	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.86348	1	8661	8661		31.53	2.3803	1	4022300	+		39717	16442	26428	26440	45282	45282					0.09498308748334239
NVLVLVLPGPE	11	Unmodified	_NVLVLVLPGPE_					0	0	0		ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.344482421875	2	575.347532	1148.68051	-0.3799	-0.00021857	-2.6981	-0.0015524	-3.078	-0.0017709	575.3459117588899	98.957	2.3582	98.957	98.457	100.82	0					160	56	5	0	0	0	0.73893	1	10094	10094		24.519	3.5723	1	2637800			39718	6290	26429	26441	45283	45283					0.11211731234061517
NVLVLVLPGPE	11	Unmodified	_NVLVLVLPGPE_					0	0	0		ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.3455810546875	2	575.347532	1148.68051	-1.3696	-0.00078799	-2.033	-0.0011697	-3.4026	-0.0019577	575.3462227460456	98.573	2.415	98.769	98.2	100.61	0.19585					159	55	5	0	0	0	0.7434	1	10149	10149		23.523	1.8369	1	2256700			39719	6290	26429	26441	45284	45284					0.11211731234061517
NVLVRKHPGTG	11	Unmodified	_NVLVRKHPGTG_					0	0	0		nc|ENSG00000063761|Q86TW2-3|ADCK1;ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3430786132812	2	589.343646	1176.67274	-0.40075	-0.00023618	-0.79332	-0.00046754	-1.1941	-0.00070372	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.72106	1	8990	8990		28.081	1.3886	1	4112500			39720	1094	26430	26442	45285	45285					0.09147016757151505
NVLVRKHPGTG	11	Unmodified	_NVLVRKHPGTG_					0	0	0		nc|ENSG00000063761|Q86TW2-3|ADCK1;ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.343017578125	2	589.343646	1176.67274	-0.6745	-0.00039751	-0.65118	-0.00038377	-1.3257	-0.00078128	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.72106	1	10098	10098		28.081	2.5074	1	16185000			39721	1094	26430	26442	45286	45286					0.09147016757151505
NVLVRKHPGTG	11	Unmodified	_NVLVRKHPGTG_					0	0	0		nc|ENSG00000063761|Q86TW2-3|ADCK1;ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.342529296875	2	589.343646	1176.67274	2.472	0.0014569	-3.7901	-0.0022337	-1.3181	-0.00077681	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.638	2	9988	9988;10036		40.058	7.2458	1	16740000			39722	1094	26430	26442	45287;45288	45287					0.09147016757151505
NVLVRKHPGTG	11	Unmodified	_NVLVRKHPGTG_					0	0	0		nc|ENSG00000063761|Q86TW2-3|ADCK1;ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3427734375	2	589.343646	1176.67274	-0.65315	-0.00038493	-0.88363	-0.00052076	-1.5368	-0.00090569	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.7144	1	9577	9577		29.17	0	1	5584100			39723	1094	26430	26442	45289	45289					0.09147016757151505
NVLVRKHPGTG	11	Unmodified	_NVLVRKHPGTG_					0	0	0		nc|ENSG00000063761|Q86TW2-3|ADCK1;ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3428955078125	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.74763	1	9483	9483		22.58	3.4761	1	17904000			39724	1094	26430	26442	45290	45290					0.09147016757151505
NVLVRKHPGTG	11	Unmodified	_NVLVRKHPGTG_					0	0	0		nc|ENSG00000063761|Q86TW2-3|ADCK1;ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3436279296875	2	589.343646	1176.67274	-0.63668	-0.00037522	-0.11858	-6.9885E-05	-0.75526	-0.00044511	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.69931	1	10971	10971		31.634	3.5528	1	2236100			39725	1094	26430	26442	45291	45291					0.09147016757151505
NVLVRKHPGTG	11	Unmodified	_NVLVRKHPGTG_					0	0	0		nc|ENSG00000063761|Q86TW2-3|ADCK1;ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	nc|ENSG00000063761|Q86TW2-3|ADCK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3414306640625	2	589.343646	1176.67274	0.15554	9.1664E-05	-1.2615	-0.00074348	-1.106	-0.00065182	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.72106	1	11235	11235		28.081	2.0181	1	10540000			39726	1094	26430	26442	45292	45292					0.09147016757151505
NVLVRQGGA	9	Unmodified	_NVLVRQGGA_					0	0	0			REV__ENSG00000010319|ENST00000231721|SEMA3G	REV__ENSG00000010319|ENST00000231721|SEMA3G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2639465332031	2	457.264333	912.514114	-0.73369	-0.00033549	0.73239	0.0003349	-0.0013027	-5.9568E-07	457.26455633568185	79.517	3.0273	79.933	78.153	81.18	0.41621					150	71	3	0	0	0	0.74721	1	9088	9088		37.159	0	1	894880	+		39727	16164	26431	26443	45293	45293					0.05435722848869773
NVLVVLGVV	9	Unmodified	_NVLVVLGVV_					0	0	0		ENSG00000030110|ENST00000374467|BAK1	ENSG00000030110|ENST00000374467|BAK1	ENSG00000030110|ENST00000374467|BAK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.301025390625	2	456.299853	910.585153	-0.68927	-0.00031451	3.5345	0.0016128	2.8453	0.0012983	456.30128778001557	35.219	1.6098	35.163	34.768	36.378	-0.056385					101	36	5	0	0	0	0.76996	1	2247	2247		33.516	4.366	1	710350			39728	881	26432	26444	45294	45294					0.1262842283366581
NVLYLQHVLAL	11	Unmodified	_NVLYLQHVLAL_					0	0	0		ENST00000398238.8_1_17:44833191-44833326:+|nuORF	ENST00000398238.8_1_17:44833191-44833326:+|nuORF	ENST00000398238.8_1_17:44833191-44833326:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8822021484375	2	641.87953	1281.74451	2.2004	0.0014124	2.3254	0.0014926	4.5258	0.002905	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.68378	1	10644	10644		34.173	2.5383	1	3624200			39729	11181	26433	26445	45295	45295					0.11490511391002656
NVLYLQHVLAL	11	Unmodified	_NVLYLQHVLAL_					0	0	0		ENST00000398238.8_1_17:44833191-44833326:+|nuORF	ENST00000398238.8_1_17:44833191-44833326:+|nuORF	ENST00000398238.8_1_17:44833191-44833326:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8821411132812	2	641.87953	1281.74451	1.5974	0.0010254	2.9074	0.0018662	4.5048	0.0028915	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.72228	1	10162	10162		27.882	2.3082	1	4266200			39730	11181	26433	26445	45296	45296					0.11490511391002656
NVLYLQHVLAL	11	Unmodified	_NVLYLQHVLAL_					0	0	0		ENST00000398238.8_1_17:44833191-44833326:+|nuORF	ENST00000398238.8_1_17:44833191-44833326:+|nuORF	ENST00000398238.8_1_17:44833191-44833326:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.88232421875	2	641.87953	1281.74451	0.91411	0.00058675	3.6201	0.0023236	4.5342	0.0029104	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.63176	2	10135	10135;10208		40.778	9.2484	1	4136300			39731	11181	26433	26445	45297;45298	45297					0.11490511391002656
NVLYLQHVLAL	11	Unmodified	_NVLYLQHVLAL_					0	0	0		ENST00000398238.8_1_17:44833191-44833326:+|nuORF	ENST00000398238.8_1_17:44833191-44833326:+|nuORF	ENST00000398238.8_1_17:44833191-44833326:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8828735351562	2	641.87953	1281.74451	1.4722	0.00094496	3.0644	0.001967	4.5366	0.002912	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.6921	1	11777	11777		32.812	0.061884	1	4511200			39732	11181	26433	26445	45299	45299					0.11490511391002656
NVMYDLITEL	10	Unmodified	_NVMYDLITEL_					0	0	0		ENSG00000143603|ENST00000271915|KCNN3;nc|ENSG00000143603|Q9UGI6-3|KCNN3;nc|ENSG00000143603|Q9UGI6-2|KCNN3	ENSG00000143603|ENST00000271915|KCNN3	ENSG00000143603|ENST00000271915|KCNN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.8043212890625	2	605.804839	1209.59513	0.26797	0.00016234	-1.4328	-0.00086797	-1.1648	-0.00070563	605.8037042070808	56.302	1.0201	56.699	56.394	57.414	0.39672					62	25	4	0	0	0	0.76096	1	5834	5834		41.427	3.6151	1	2984400			39733	4650	26434	26446	45300	45300					-0.0012880201393272728
NVNFEDPASA	10	Unmodified	_NVNFEDPASA_					0	0	0		ENSG00000135919|ENST00000409304|SERPINE2;nc|ENSG00000135919|P07093|SERPINE2;nc|ENSG00000135919|P07093-3|SERPINE2	ENSG00000135919|ENST00000409304|SERPINE2	ENSG00000135919|ENST00000409304|SERPINE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.2369995117188	2	532.238178	1062.4618	0.26072	0.00013877	-0.79071	-0.00042085	-0.52999	-0.00028208	532.2375023776897	39.934	0.69376	39.904	39.565	40.258	-0.03027					33	16	3	0	0	0	0.80179	1	2832	2832		39.253	2.0937	1	251430			39734	4068	26435	26447	45301	45301					-0.06692905075442468
NVNGHQNGYC	10	Unmodified	_NVNGHQNGYC_					0	0	0		ENST00000460895.5_1_3:134498709-134670235:+|nuORF;ENST00000473867.5_3_3:134560356-134670235:+|nuORF;ENST00000474732.1_2_3:134571358-134670235:+|nuORF;ENST00000497173.5_3_3:134515011-134670235:+|nuORF	ENST00000460895.5_1_3:134498709-134670235:+|nuORF	ENST00000460895.5_1_3:134498709-134670235:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.2254638671875	2	553.227622	1104.44069	-0.40886	-0.00022619	-3.7366	-0.0020672	-4.1454	-0.0022934	553.2253333365538	30.442	0.53967	30.467	30.216	30.755	0.025013					25	14	3	0	0	0	0.86763	1	1583	1583		26.693	4.733	1	51662			39735	12015	26436	26448	45302	45302					-0.10735193655909825
NVNKSVFLT	9	Unmodified	_NVNKSVFLT_					0	0	0			REV__L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|45|2|sense	REV__L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|45|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.2850036621094	2	511.287474	1020.5604	-1.5518	-0.0007934	0.65042	0.00033255	-0.90135	-0.00046085	511.28763661664226	41.815	1.2851	41.815	41.359	42.644	0					75	31	4	0	0	0	0.51307	1	2823	2823		51.335	7.2187	1	1825200	+		39736	29545	26437	26449	45303	45303					0.05093742960275449
NVNLEYQVK	9	Unmodified	_NVNLEYQVK_					0	0	0		nc|ENSG00000091181|Q01344-3|IL5RA;nc|ENSG00000091181|Q01344-2|IL5RA;nc|ENSG00000091181|Q01344-4|IL5RA;ENSG00000091181|ENST00000446632|IL5RA;nc|ENSG00000091181|Q01344-5|IL5RA	nc|ENSG00000091181|Q01344-3|IL5RA	nc|ENSG00000091181|Q01344-3|IL5RA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.29541015625	2	553.795663	1105.57677	-1.1091	-0.00061423	-0.14458	-8.0067E-05	-1.2537	-0.00069429	553.7962542953013	71.908	1.7842	72.293	71.504	73.288	0.38519					127	42	6	0	0	0	0.75725	1	7986	7986		36.447	3.6343	1	1264400			39737	1673	26438	26450	45304	45304					0.028208241263882883
NVNLVRALLTR	11	Unmodified	_NVNLVRALLTR_					0	0	0		nc|ENSG00000127412|Q9NQA5-2|TRPV5;ENSG00000127412|ENST00000265310|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8928833007812	2	634.893503	1267.77245	-0.0069402	-4.4063E-06	-1.6425	-0.0010428	-1.6494	-0.0010472	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.61369	1	10921	10921		42.864	3.6114	1	31286000			39738	3494	26439	26451	45305	45305					0.1492783437106482
NVNLVRALLTR	11	Unmodified	_NVNLVRALLTR_					0	0	0		nc|ENSG00000127412|Q9NQA5-2|TRPV5;ENSG00000127412|ENST00000265310|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	423.5976867675781	3	423.598094	1267.77245	-0.96194	-0.00040747	0.13168	5.5777E-05	-0.83026	-0.0003517	423.59805160624353	105.99	2.401	105.99	105.33	107.73	0					158	55	4	0	0	0	0.77061	1	10948	10948		15.921	0	1	1845700			39739	3494	26439	26451	45306	45306					0.1492783437106482
NVNLVRALLTR	11	Unmodified	_NVNLVRALLTR_					0	0	0		nc|ENSG00000127412|Q9NQA5-2|TRPV5;ENSG00000127412|ENST00000265310|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	423.5976257324219	3	423.598094	1267.77245	-0.18424	-7.8043E-05	-0.80349	-0.00034036	-0.98773	-0.0004184	423.5976787176537	105.93	2.5264	105.91	105.23	107.75	-0.025146					222	59	5	0	0	0	0.77061	1	11506	11506		11.455	0	1	5735600			39740	3494	26439	26451	45307	45307					0.1492783437106482
NVNLVRALLTR	11	Unmodified	_NVNLVRALLTR_					0	0	0		nc|ENSG00000127412|Q9NQA5-2|TRPV5;ENSG00000127412|ENST00000265310|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8937377929688	2	634.893503	1267.77245	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.65	1	107.61	107.11	108.11	-0.038383								0	0	0	0.56276	1	11723	11723		29.17	2.1227	1				39741	3494	26439	26451	45308	45308					0.1492783437106482
NVNLVRALLTR	11	Unmodified	_NVNLVRALLTR_					0	0	0		nc|ENSG00000127412|Q9NQA5-2|TRPV5;ENSG00000127412|ENST00000265310|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8926391601562	2	634.893503	1267.77245	1.3476	0.00085558	-2.8123	-0.0017855	-1.4647	-0.0009299	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.61369	1	11573	11573		42.864	6.4175	1	42647000			39742	3494	26439	26451	45309	45309					0.1492783437106482
NVNLVRALLTR	11	Unmodified	_NVNLVRALLTR_					0	0	0		nc|ENSG00000127412|Q9NQA5-2|TRPV5;ENSG00000127412|ENST00000265310|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.893798828125	2	634.893503	1267.77245	1.4999	0.00095225	-3.3387	-0.0021197	-1.8389	-0.0011675	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.73893	1	11504	11504		24.519	0.99649	1	68597000			39743	3494	26439	26451	45310	45310					0.1492783437106482
NVNLVRALLTR	11	Unmodified	_NVNLVRALLTR_					0	0	0		nc|ENSG00000127412|Q9NQA5-2|TRPV5;ENSG00000127412|ENST00000265310|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.59759521484375	3	423.598094	1267.77245	0.73411	0.00031097	-1.8552	-0.00078587	-1.1211	-0.00047491	423.59723125055814	105.63	2.8345	105.73	105.02	107.86	0.10765					213	69	5	0	0	0	0.73893	1	11198	11198		21.78	8.2725	1	8035700			39744	3494	26439	26451	45311	45311					0.1492783437106482
NVNLVRALLTR	11	Unmodified	_NVNLVRALLTR_					0	0	0		nc|ENSG00000127412|Q9NQA5-2|TRPV5;ENSG00000127412|ENST00000265310|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8931884765625	2	634.893503	1267.77245	0.93451	0.00059331	-2.8314	-0.0017976	-1.8969	-0.0012043	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.65746	1	11346	11346		37.812	4.9991	1	69492000			39745	3494	26439	26451	45312	45312					0.1492783437106482
NVPALESGYT	10	Unmodified	_NVPALESGYT_					0	0	0		ENSG00000083168|ENST00000265713|KAT6A	ENSG00000083168|ENST00000265713|KAT6A	ENSG00000083168|ENST00000265713|KAT6A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7664184570312	2	525.758746	1049.50294	-0.37563	-0.00019749	0.034685	1.8236E-05	-0.34095	-0.00017926	525.7586389057877	48.428	0.95708	48.897	48.156	49.113	0.46941					45	23	4	0	0	0	0.54701	1	4675	4675		52.937	1.6012	1	1273800			39746	1498	26440	26452	45313	45313					-0.01983144035943951
NVPIRFTKI	9	Unmodified	_NVPIRFTKI_					0	0	0		CON__Q3Y5Z3	CON__Q3Y5Z3	CON__Q3Y5Z3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.3327026367188	2	544.334759	1086.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.069	1	98.297	97.797	98.797	0.22787								0	0	0	0.29134	1	10163	10163		34.173	9.9698	1			+	39747	624	26441	26453	45314	45314					0.11510301502266884
NVPNNRPK	8	Unmodified	_NVPNNRPK_					0	0	0			REV__nc|ENSG00000155966|P51816-7|AFF2	REV__nc|ENSG00000155966|P51816-7|AFF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.76092529296875	2	469.761958	937.509363	0.13992	6.5729E-05	-1.2577	-0.0005908	-1.1177	-0.00052507	469.7613068625106	35.735	1.6772	35.674	35.283	36.96	-0.060337					67	47	2	0	0	0	0.84341	1	1886	1886		24.203	0	1	144740	+		39748	20457	26442	26454	45315	45315					0.03810838706078812
NVPQPPVAK	9	Unmodified	_NVPQPPVAK_					0	0	0		ENSG00000236383|ENST00000636331|CCDC200	ENSG00000236383|ENST00000636331|CCDC200	ENSG00000236383|ENST00000636331|CCDC200	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.2772216796875	2	475.276909	948.539266	1.0333	0.00049109	-0.71761	-0.00034107	0.31566	0.00015003	475.27644256168264	22.305	0.57499	21.886	21.61	22.185	-0.41879					20	12	2	0	0	0	0.76255	1	884	884		35.618	1.4457	1	66464			39749	8754	26443	26455	45316	45316					0.06293777651421806
NVQETYRY	8	Unmodified	_NVQETYRY_					0	0	0		ENSG00000120457|ENST00000529694|KCNJ5	ENSG00000120457|ENST00000529694|KCNJ5	ENSG00000120457|ENST00000529694|KCNJ5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	536.7540893554688	2	536.756538	1071.49852	0.051956	2.7887E-05	0.28319	0.000152	0.33514	0.00017989	536.7558022502886	37.839	0.72968	37.815	37.573	38.302	-0.023979					32	16	3	0	0	0	0.93786	1	2554	2554		53.351	7.3995	1	281640			39750	3130	26444	26456	45317	45317					-0.03436608458855517
NVQETYRY	8	Unmodified	_NVQETYRY_					0	0	0		ENSG00000120457|ENST00000529694|KCNJ5	ENSG00000120457|ENST00000529694|KCNJ5	ENSG00000120457|ENST00000529694|KCNJ5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.7551879882812	2	536.756538	1071.49852	-0.28997	-0.00015564	1.1245	0.00060356	0.83449	0.00044792	536.7560248485332	37.771	0.7993	37.72	37.406	38.205	-0.050369					27	17	2	0	0	0	0.89962	1	2628	2628		38.806	8.4884	1	301410			39751	3130	26444	26456	45318	45318					-0.03436608458855517
NVQLHGSKGLK	11	Unmodified	_NVQLHGSKGLK_					0	0	0			REV__ENST00000483771.5_1_10:86008492-86018392:+|nuORF	REV__ENST00000483771.5_1_10:86008492-86018392:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8411254882812	2	590.843479	1179.67241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.14	1	117.2	116.7	117.7	0.059448								0	0	0	0.56276	1	12399	12399		14.137	0.68308	1		+		39752	20126	26445	26457	45319	45319					0.08975597037260741
NVQLRWQM	8	Unmodified	_NVQLRWQM_					0	0	0			REV__ENST00000494174.5_1_20:32245637-32248074:-|nuORF	REV__ENST00000494174.5_1_20:32245637-32248074:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	537.7763671875	2	537.779293	1073.54403	0.3279	0.00017634	-2.6616	-0.0014314	-2.3337	-0.001255	537.7776322797132	43.904	0.98605	43.961	43.678	44.664	0.056747					36	23	2	0	0	0	0.86288	1	3087	3087		26.796	1.222	1	152290	+		39753	18687	26446	26458	45320	45320					0.010203385225395323
NVQNKNSSY	9	Unmodified	_NVQNKNSSY_					0	0	0		ENSG00000196230|ENST00000327892|TUBB;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000406999.2_1_6:153220048-153220141:+|nuORF;ENST00000454403.1_1_13:41958968-41959286:-|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF	ENSG00000196230|ENST00000327892|TUBB	ENSG00000196230|ENST00000327892|TUBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.2512817382812	2	527.25162	1052.48869	0.15043	7.9313E-05	-0.20937	-0.00011039	-0.058939	-3.1076E-05	527.2512537672727	19.126	0.21413	19.052	18.941	19.155	-0.073704					8	4	2	0	0	0	0.38563	1	392	392		58.782	10.866	1	23502			39754	8029	26447	26459	45321	45321					-0.035457964642318984
NVQNKNSSY	9	Unmodified	_NVQNKNSSY_					0	0	0		ENSG00000196230|ENST00000327892|TUBB;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000406999.2_1_6:153220048-153220141:+|nuORF;ENST00000454403.1_1_13:41958968-41959286:-|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF	ENSG00000196230|ENST00000327892|TUBB	ENSG00000196230|ENST00000327892|TUBB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	527.25162	1052.48869	0.97329	0.00051317	-1.0204	-0.00053799	-0.047071	-2.4818E-05	527.2512648549651	19.113	0.27603	19.038	18.914	19.19	-0.074974	0.027798	-0.00083056	NaN	58.782	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19999			39755	8029	26447	26459							-0.035457964642318984
NVQNKNSSY	9	Unmodified	_NVQNKNSSY_					0	0	0		ENSG00000196230|ENST00000327892|TUBB;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000406999.2_1_6:153220048-153220141:+|nuORF;ENST00000454403.1_1_13:41958968-41959286:-|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF	ENSG00000196230|ENST00000327892|TUBB	ENSG00000196230|ENST00000327892|TUBB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	527.25162	1052.48869	-0.24264	-0.00012793	0.63661	0.00033565	0.39397	0.00020772	527.251613870912	18.976	0.20141	19.02	18.968	19.169	0.043747	0.0098584	0.00091672	NaN	58.782	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44109			39756	8029	26447	26459							-0.035457964642318984
NVQNKNSSY	9	Unmodified	_NVQNKNSSY_					0	0	0		ENSG00000196230|ENST00000327892|TUBB;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000406999.2_1_6:153220048-153220141:+|nuORF;ENST00000454403.1_1_13:41958968-41959286:-|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF	ENSG00000196230|ENST00000327892|TUBB	ENSG00000196230|ENST00000327892|TUBB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	527.25162	1052.48869	0.85892	0.00045287	-0.47833	-0.0002522	0.38059	0.00020067	527.2510477990716	18.954	0.1952	18.93	18.852	19.047	-0.023342	-0.079825	-0.00025899	NaN	58.782	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42367			39757	8029	26447	26459							-0.035457964642318984
NVQSYCSPHHP	11	Unmodified	_NVQSYCSPHHP_					0	0	0			REV__ENSG00000134250|ENST00000256646|NOTCH2	REV__ENSG00000134250|ENST00000256646|NOTCH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.7737426757812	2	634.777479	1267.5404	-0.0023067	-1.4642E-06	-0.028012	-1.7782E-05	-0.030319	-1.9246E-05	634.7774228738218	50.229	0.98591	50.226	49.624	50.609	-0.0030327					51	23	3	0	0	0	0.68378	1	4207	4207		34.173	0.25091	1	200210	+		39758	19125	26448	26460	45322	45322					-0.08266376041979129
NVRAVFLTKF	10	Unmodified	_NVRAVFLTKF_					0	0	0			REV__nc|ENSG00000104852|P08621-3|SNRNP70	REV__nc|ENSG00000104852|P08621-3|SNRNP70	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8560791015625	2	597.853316	1193.69208	0.93582	0.00055948	3.9067	0.0023357	4.8426	0.0028951	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.8545	1	9341	9341		36.447	1.2947	1	2638300	+		39759	17479	26449	26461	45323	45323					0.10297973048000131
NVRERDNSDV	10	Unmodified	_NVRERDNSDV_					0	0	0			REV__nc|ENSG00000134287|P61204-2|ARF3;REV__ENST00000470670.5_1_1:228284963-228285711:+|nuORF	REV__ENST00000470670.5_1_1:228284963-228285711:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.7547912597656	3	401.861935	1202.56398	1.1932	0.00047952	2.0885	0.00083931	3.2818	0.0013188	401.86127306779457	26.52	0.18112	26.345	26.25	26.431	-0.17559					5	3	2	0	0	0	0.37624	1	1460	1460		24.232	0	1	6446	+		39760	29857;19128	26450	26462	45324	45324					-0.029202390038108206
NVRFPSKP	8	Unmodified	_NVRFPSKP_					0	0	0			REV__nc|ENSG00000128591|Q14315-2|FLNC	REV__nc|ENSG00000128591|Q14315-2|FLNC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.76678466796875	2	472.769252	943.52395	-0.10807	-5.1094E-05	-4.0843	-0.0019309	-4.1924	-0.001982	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.91472	1	8245	8245		44.117	3.5442	1	501240	+		39761	18782	26451	26463	45325	45325					0.04992910854230104
NVRILRRHLV	10	Unmodified	_NVRILRRHLV_					0	0	0		ENST00000430298.6_1_19:12222347-12224207:+|nuORF	ENST00000430298.6_1_19:12222347-12224207:+|nuORF	ENST00000430298.6_1_19:12222347-12224207:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.1911926269531	3	425.942195	1274.80476	0.69883	0.00029766	0.76367	0.00032528	1.4625	0.00062294	425.9433354670858	96.876	0.17313	97.04	96.922	97.095	0.16316					5	3	2	0	0	0	0.37624	1	9983	9983		10.587	4.2659	1	19432			39762	11630	26452	26464	45326	45326					0.1783466656472683
NVRPLSYPD	9	Unmodified	_NVRPLSYPD_					0	0	0		ENSG00000115963|ENST00000263895|RND3	ENSG00000115963|ENST00000263895|RND3	ENSG00000115963|ENST00000263895|RND3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8204345703125	2	530.774731	1059.53491	0.36133	0.00019179	-1.1525	-0.00061174	-0.7912	-0.00041995	530.7739011273608	79.585	0.76559	80.002	79.614	80.38	0.41621					39	17	3	0	0	0	0.20789	1	9093	9093		53.351	20.539	1	581330			39763	2886	26453	26465	45327	45327					0.0075226843787277176
NVRRRPIAK	9	Unmodified	_NVRRRPIAK_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.3539428710938	2	555.354348	1108.69414	1.5834	0.00087937	-3.1167	-0.0017309	-1.5333	-0.00085153	555.3524993853406	100.59	1.0891	100.89	100.45	101.54	0.2999					67	28	3	0	0	0	0.77546	1	12211	12211		31.955	3.7006	1	1093500	+		39764	16090	26454	26466	45328	45328					0.14414446576506634
NVSDLILAK	9	Unmodified	_NVSDLILAK_					0	0	0			REV__ENSG00000047365|ENST00000303965|ARAP2	REV__ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.7908020019531	2	486.78985	971.565146	0.5341	0.00025999	-0.50217	-0.00024445	0.03193	1.5543E-05	486.78936329822994	33.687	0.96471	33.857	33.314	34.278	0.16971					48	22	3	0	0	0	0.41695	1	2458	2458		56.632	3.6955	1	621090	+		39765	16351	26455	26467	45329	45329					0.07822627103041668
NVSGKLIIYWS	11	Unmodified	_NVSGKLIIYWS_					0	0	0			REV__nc|ENSG00000091428|Q8WZA2-2|RAPGEF4	REV__nc|ENSG00000091428|Q8WZA2-2|RAPGEF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3592529296875	2	640.355888	1278.69722	2.419	0.001549	2.1895	0.0014021	4.6085	0.0029511	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.67778	1	10860	10860		35.152	4.8343	1	625580	+		39766	17012	26456	26468	45330	45330					0.06902232120000917
NVSHIRTT	8	Unmodified	_NVSHIRTT_					0	0	0			REV__ENST00000416144.5_1_7:99160096-99161679:+|nuORF	REV__ENST00000416144.5_1_7:99160096-99161679:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.25396728515625	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.89043	1	8551	8551		35.618	1.4457	1	1673200	+		39767	26430	26457	26469	45331	45331					0.027191324691784757
NVSLSFNR	8	Unmodified	_NVSLSFNR_					0	0	0			REV__ENSG00000146830|ENST00000678049|GIGYF1	REV__ENSG00000146830|ENST00000678049|GIGYF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.7478332519531	2	468.748516	935.482479	0.15181	7.1158E-05	-0.41104	-0.00019267	-0.25924	-0.00012152	468.74827770995927	39.473	0.60802	39.443	39.157	39.765	-0.03027					21	14	2	0	0	0	0.89494	1	2758	2758		37.159	2.9866	1	156590	+		39768	15895	26458	26470	45332	45332					0.012157300948956618
NVSQSNMSAF	10	Unmodified	_NVSQSNMSAF_					0	0	0		nc|ENSG00000152520|Q58A45-3|PAN3;ENSG00000152520|ENST00000380958|PAN3;nc|ENSG00000152520|Q58A45-4|PAN3;ENST00000503791.5_1_13:28712794-28846220:+|nuORF	nc|ENSG00000152520|Q58A45-3|PAN3	nc|ENSG00000152520|Q58A45-3|PAN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	543.2421875	2	542.740031	1083.46551	0.6357	0.00034502	-0.75407	-0.00040926	-0.11837	-6.4242E-05	542.7395931956743	28.664	0.55029	28.685	28.368	28.918	0.021948					49	28	2	0	0	0	0.73395	1	1195	1195		42.864	5.7052	1	134850			39769	5180	26459	26471	45333	45333					-0.07288558573213777
NVSREGLPTK	10	Unmodified	_NVSREGLPTK_					0	0	0			REV__ENSG00000131711|ENST00000296755|MAP1B	REV__ENSG00000131711|ENST00000296755|MAP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.8058471679688	2	550.806562	1099.59857	0.83023	0.00045729	-1.0151	-0.00055911	-0.18484	-0.00010181	550.8059762800531	29.915	0.63903	29.9	29.601	30.24	-0.015167					24	14	2	0	0	0	0.81117	1	1533	1533		38.754	10.672	1	81348	+		39770	18960	26460	26472	45334	45334					0.052756288749378655
NVSRKQIVL	9	Unmodified	_NVSRKQIVL_					0	0	0			REV__ENST00000351004.7_1_7:79818413-79818518:+|nuORF	REV__ENST00000351004.7_1_7:79818413-79818518:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.830078125	2	528.82984	1055.64513	0.18733	9.9068E-05	-0.16737	-8.8511E-05	0.019963	1.0557E-05	528.8296510023945	32.993	0.46044	32.939	32.72	33.18	-0.054337					17	11	2	0	0	0	0.74721	1	1990	1990		37.159	2.9866	1	33757	+		39771	25340	26461	26473	45335	45335					0.11953113496883816
NVSRKQIVL	9	Unmodified	_NVSRKQIVL_					0	0	0			REV__ENST00000351004.7_1_7:79818413-79818518:+|nuORF	REV__ENST00000351004.7_1_7:79818413-79818518:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	528.82984	1055.64513	0.14151	7.4835E-05	-0.21143	-0.00011181	-0.069919	-3.6975E-05	528.8295133254311	32.852	0.35316	32.858	32.686	33.039	0.006012	-0.040634	-2.7459E-05	NaN	37.159	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21805	+		39772	25340	26461	26473							0.11953113496883816
NVSRKQIVL	9	Unmodified	_NVSRKQIVL_					0	0	0			REV__ENST00000351004.7_1_7:79818413-79818518:+|nuORF	REV__ENST00000351004.7_1_7:79818413-79818518:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	528.82984	1055.64513	0.18733	9.9068E-05	-0.16737	-8.8511E-05	0.019963	1.0557E-05	528.8296510023945	32.993	0.46044	32.939	32.72	33.18	-0.054337	0.040634	1.9139E-05	NaN	37.159	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33757	+		39773	25340	26461	26473							0.11953113496883816
NVSSKHIL	8	Unmodified	_NVSSKHIL_					0	0	0			REV__ENST00000485081.5_1_1:182847108-182856566:+|nuORF	REV__ENST00000485081.5_1_1:182847108-182856566:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2604064941406	2	449.261259	896.507966	-1.6904	-0.00075944	0.29835	0.00013403	-1.3921	-0.0006254	449.2612435598619	72.23	1.3235	72.615	72.251	73.575	0.38582					73	31	3	0	0	0	0.87479	1	8108	8108		30.504	1.3541	1	1206100	+		39774	19254	26462	26474	45336	45336					0.05557204617343814
NVSVDHTRNP	10	Unmodified	_NVSVDHTRNP_					0	0	0		nc|ENSG00000138769|Q92772|CDKL2;ENSG00000138769|ENST00000307465|CDKL2	nc|ENSG00000138769|Q92772|CDKL2	nc|ENSG00000138769|Q92772|CDKL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.7877807617188	2	569.783619	1137.55268	0.49606	0.00028265	3.6647	0.0020881	4.1608	0.0023708	569.7854370196345	79.58	0.6403	79.711	79.504	80.144	0.13085					34	22	2	0	0	0	0.82886	1	7553	7553		37.812	1.3648	1	62474			39775	4330	26463	26475	45337	45337					-0.01059016307294769
NVTLKQLNVRP	11	Unmodified	_NVTLKQLNVRP_					0	0	0		ENST00000434012.2_1_4:121263589-121263781:+|nuORF	ENST00000434012.2_1_4:121263589-121263781:+|nuORF	ENST00000434012.2_1_4:121263589-121263781:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.3843383789062	2	641.385511	1280.75647	-0.056243	-3.6073E-05	-1.4846	-0.00095223	-1.5409	-0.00098831	641.38426478806	102.85	1.2882	102.86	102.47	103.76	0.0082016					78	31	4	0	0	0	0.62614	1	11029	11029		41.427	3.6151	1	1910600			39776	11691	26464	26476	45338	45338					0.12732128134166487
NVVGYETVV	9	Unmodified	_NVVGYETVV_					0	0	0		ENSG00000166135|ENST00000299163|HIF1AN	ENSG00000166135|ENST00000299163|HIF1AN	ENSG00000166135|ENST00000299163|HIF1AN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.25701904296875	2	490.258382	978.502212	2.788	0.0013668	-3.8394	-0.0018823	-1.0514	-0.00051545	490.256604139781	101.82	0.8909	101.77	101.4	102.3	-0.049828					30	20	2	0	0	0	0.78058	1	11107	11107		30.504	2.6214	1	160100			39777	6160	26465	26477	45339	45339					0.012100613150096251
NVVGYETVV	9	Unmodified	_NVVGYETVV_					0	0	0		ENSG00000166135|ENST00000299163|HIF1AN	ENSG00000166135|ENST00000299163|HIF1AN	ENSG00000166135|ENST00000299163|HIF1AN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	490.258382	978.502212	-0.08068	-3.9554E-05	-0.92962	-0.00045575	-1.0103	-0.00049531	490.2580802449996	101.84	1.1978	101.86	101.56	102.76	0.01989	0.087013	0.00023817	NaN	30.504	35	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118540			39778	6160	26465	26477							0.012100613150096251
NVVGYETVV	9	Unmodified	_NVVGYETVV_					0	0	0		ENSG00000166135|ENST00000299163|HIF1AN	ENSG00000166135|ENST00000299163|HIF1AN	ENSG00000166135|ENST00000299163|HIF1AN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	490.258382	978.502212	-0.985	-0.0004829	-0.14139	-6.9316E-05	-1.1264	-0.00055222	490.2580671753098	101.64	0.75911	101.68	101.34	102.1	0.044823	-0.085732	0.001011	NaN	30.504	39	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186160			39779	6160	26465	26477							0.012100613150096251
NVVITKRGS	9	Unmodified	_NVVITKRGS_					0	0	0			REV__ENSG00000170961|ENST00000303924|HAS2	REV__ENSG00000170961|ENST00000303924|HAS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.2928466796875	2	487.293091	972.571629	-1.6564	-0.00080713	1.8268	0.00089018	0.17042	8.3045E-05	487.29386636791077	90.875	2.2933	91.055	90.557	92.85	0.18029					120	54	3	0	0	0	0.7932	1	9139	9139		26.693	2.1737	1	1353600	+		39780	17381	26466	26478	45340	45340					0.08424565054428967
NVVKLLGEQY	10	Unmodified	_NVVKLLGEQY_					0	0	0		ENST00000444314.6_1_11:65101357-65109054:+|nuORF;nc|ENSG00000133884|Q92785-2|DPF2;ENSG00000133884|ENST00000528416|DPF2	ENST00000444314.6_1_11:65101357-65109054:+|nuORF	ENST00000444314.6_1_11:65101357-65109054:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.8259887695312	2	581.826963	1161.63937	-0.54663	-0.00031804	0.59142	0.0003441	0.04479	2.606E-05	581.8270922597002	58.582	0.57628	59.135	58.88	59.456	0.55323					34	13	4	0	0	0	0.47072	1	6157	6157		58.246	17.674	1	599300			39781	3898	26467	26479	45341	45341					0.06501970194585738
NVVLRLRPG	9	Unmodified	_NVVLRLRPG_					0	0	0			REV__ENST00000462090.5_1_7:100225070-100228611:-|nuORF	REV__ENST00000462090.5_1_7:100225070-100228611:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.3246459960938	2	512.324725	1022.6349	0.9839	0.00050408	-1.2426	-0.00063659	-0.25866	-0.00013252	512.324091379389	21.2	0.73422	20.741	20.395	21.129	-0.4591					30	17	2	0	0	0	0.7932	1	741	741		19.36	1.0356	1	143260	+		39782	17606	26468	26480	45342	45342					0.12448550562328364
NVVLRLRPG	9	Unmodified	_NVVLRLRPG_					0	0	0			REV__ENST00000462090.5_1_7:100225070-100228611:-|nuORF	REV__ENST00000462090.5_1_7:100225070-100228611:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.3241577148438	2	512.324725	1022.6349	0.39641	0.00020309	-0.71681	-0.00036724	-0.3204	-0.00016415	512.3242771059046	21.552	0.81508	20.923	20.462	21.277	-0.62834					33	20	2	0	0	0	0.7932	1	792	792		24.203	0	1	114470	+		39783	17606	26468	26480	45343	45343					0.12448550562328364
NVYCCFFQ	8	Carbamidomethyl (C)	_NVYCC(Carbamidomethyl (C))FFQ_	NVYC(0.15)C(0.85)FFQ		NVYC(-7.6)C(7.6)FFQ		0	1	0		ENSG00000279111|ENST00000623167|OR10X1	ENSG00000279111|ENST00000623167|OR10X1	ENSG00000279111|ENST00000623167|OR10X1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.7201538085938	2	540.717513	1079.42047	0.43635	0.00023594	3.5089	0.0018973	3.9453	0.0021333	540.719373079286	33.569	0.86212	33.513	33.004	33.866	-0.056385					24	20	2	0	0	0	0.92973	1	2057	2057		50.025	12.213	2	62322			39784	9042	26469	26481	45344	45344	113				-0.11606080640081018
NVYDTLFCE	9	Unmodified	_NVYDTLFCE_					0	0	0		ENST00000524769.1_1_11:47266831-47266903:-|nuORF;ENST00000534752.5_1_11:47260907-47267123:-|nuORF;ENSG00000134575|ENST00000672073|ACP2	ENST00000524769.1_1_11:47266831-47266903:-|nuORF	ENST00000524769.1_1_11:47266831-47266903:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.2376708984375	2	552.239332	1102.46411	-1.3809	-0.00076258	-1.1078	-0.00061176	-2.4887	-0.0013743	552.2384583580823	47.429	0.66468	47.901	47.607	48.272	0.4714					30	16	3	0	0	0	0.67345	1	4521	4521		42.396	6.7778	1	1104200			39785	3946	26470	26482	45345	45345					-0.08302192661972185
NVYDTLFCE	9	Unmodified	_NVYDTLFCE_					0	0	0		ENST00000524769.1_1_11:47266831-47266903:-|nuORF;ENST00000534752.5_1_11:47260907-47267123:-|nuORF;ENSG00000134575|ENST00000672073|ACP2	ENST00000524769.1_1_11:47266831-47266903:-|nuORF	ENST00000524769.1_1_11:47266831-47266903:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	552.239332	1102.46411	-1.1441	-0.00063182	-1.7316	-0.00095627	-2.8757	-0.0015881	552.2382075062718	47.204	0.5503	48.127	47.915	48.466	0.92315	0.11301	-0.00042185	NaN	42.396	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	852140			39786	3946	26470	26482							-0.08302192661972185
NVYETNGTIEE	11	Unmodified	_NVYETNGTIEE_					0	0	0			REV__ENST00000533345.5_1_11:12419899-12534890:+|nuORF	REV__ENST00000533345.5_1_11:12419899-12534890:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.782470703125	2	634.785689	1267.55683	-0.95436	-0.00060581	-1.5959	-0.001013	-2.5502	-0.0016188	634.7846706492742	30.661	0.62018	30.689	30.362	30.982	0.028618					32	13	3	0	0	0	0.71394	1	2008	2008		20.03	1.7684	1	369920	+		39787	28342	26471	26483	45346	45346					-0.06625016394878003
NVYTRAASNE	10	Unmodified	_NVYTRAASNE_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.7716064453125	2	562.770177	1123.5258	-0.13096	-7.3702E-05	3.9243	0.0022085	3.7934	0.0021348	562.7724374182261	60.392	0.63914	60.945	60.621	61.26	0.55323					36	17	3	0	0	0	0.81117	1	6431	6431		38.754	0.94209	1	1147400	+		39788	21174	26472	26484	45347	45347					-0.03102124918473237
NWIIINGCM	9	Carbamidomethyl (C),Oxidation (M)	_NWIIINGC(Carbamidomethyl (C))M(Oxidation (M))_	NWIIINGC(1)M	NWIIINGCM(1)	NWIIINGC(56)M	NWIIINGCM(56)	0	1	1			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.7652587890625	2	568.764994	1135.51544	-0.3787	-0.00021539	1.241	0.00070582	0.86227	0.00049043	568.7655911855649	83.939	1.5521	84.374	83.791	85.343	0.43538					92	37	3	0	0	0	0.43338	1	9757	9757		55.504	14.726	1	1984100	+		39789	18979	26473	26485	45348	45348	237	275			-0.0469014716888978
NWIIINGCM	9	Carbamidomethyl (C),Oxidation (M)	_NWIIINGC(Carbamidomethyl (C))M(Oxidation (M))_	NWIIINGC(1)M	NWIIINGCM(1)	NWIIINGC(48)M	NWIIINGCM(48)	0	1	1			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.7657470703125	2	568.764994	1135.51544	0.85198	0.00048457	0.17733	0.00010086	1.0293	0.00058544	568.76493069356	83.965	1.7117	84.42	83.767	85.479	0.45556					113	41	4	0	0	0	0.58151	1	9828	9828		47.916	15.103	1	2150800	+		39790	18979	26473	26485	45349	45349	237	275			-0.0469014716888978
NWKISLLLKP	10	Unmodified	_NWKISLLLKP_					0	0	0			REV__ENST00000481749.5_1_3:138374233-138426144:-|nuORF	REV__ENST00000481749.5_1_3:138374233-138426144:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.5885009765625	3	404.588536	1210.74378	0.17885	7.236E-05	1.4829	0.00059998	1.6618	0.00067234	404.5890516543303	39.161	1.4029	39.25	38.65	40.053	0.088371					99	37	3	0	0	0	0.85441	1	2380	2380		20.837	2.3061	1	306250	+		39791	16383	26474	26486	45350	45350					0.14683716741933495
NWKKRRWRKWG	11	Unmodified	_NWKKRRWRKWG_					0	0	0			REV__chr7:7639110-7640320|13|38.23|0.7|5.76|-|1|None,RPA3|2	REV__chr7:7639110-7640320|13|38.23|0.7|5.76|-|1|None,RPA3|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.6361694335938	3	534.307649	1599.90112	-0.47463	-0.0002536	-4.4505	-0.002378	-4.9252	-0.0026316	534.3051439951548	53.434	0.25028	54.049	53.902	54.152	0.61436					7	5	2	0	0	0	0.18304	1	5426	5426		10.104	0.45776	1	220410	+		39792	15911	26475	26487	45351	45351					0.12516234124655057
NWKMKKKRKRK	11	Unmodified	_NWKMKKKRKRK_					0	0	0		ENST00000542507.5_2_1:29095522-29095663:+|nuORF	ENST00000542507.5_2_1:29095522-29095663:+|nuORF	ENST00000542507.5_2_1:29095522-29095663:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.9091491699219	3	510.98904	1529.94529	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.353	1	28.421	27.921	28.921	0.06868								0	0	0	0.56276	1	1167	1167		6.001	0	1				39793	13535	26476	26488	45352	45352					0.20151502226622142
NWLLKLIENKI	11	Unmodified	_NWLLKLIENKI_					0	0	0		ENST00000262041.5_1_7:15650860-15651031:-|nuORF	ENST00000262041.5_1_7:15650860-15651031:-|nuORF	ENST00000262041.5_1_7:15650860-15651031:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.9485778808594	3	461.950134	1382.82857	-1.7389	-0.00080328	-2.2007	-0.0010166	-3.9396	-0.0018199	461.9491276210282	107.85	0.72025	107.89	107.25	107.97	0.036125					70	17	5	0	0	0	0.78083	1	11472	11472		15.337	5.2336	1	82858000			39794	9427	26477	26489	45353	45353					0.15247042487908402
NWLLRAGA	8	Unmodified	_NWLLRAGA_					0	0	0			REV__nc|ENSG00000231852|P08686-2|CYP21A2	REV__nc|ENSG00000231852|P08686-2|CYP21A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7544860839844	2	450.756144	899.497735	-1.264	-0.00056978	-3.0711	-0.0013843	-4.3351	-0.0019541	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.86288	1	7627	7627		26.796	1.3459	1	414240	+		39795	23764	26478	26490	45354	45354					0.043966416827515786
NWREIHHL	8	Unmodified	_NWREIHHL_					0	0	0		ENSG00000112276|ENST00000314641|BVES	ENSG00000112276|ENST00000314641|BVES	ENSG00000112276|ENST00000314641|BVES	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.7830810546875	2	552.788507	1103.56246	-1.1045	-0.00061054	3.3236	0.0018373	2.2192	0.0012267	552.7899581403892	73.535	1.3702	73.923	73.497	74.867	0.38779					94	35	4	0	0	0	0.47906	2	8351	8351;8364		76.847	8.0598	1	12398000			39796	2647	26479	26491	45355;45356	45355					0.014822164887618783
NWRLFFFFEFW	11	Unmodified	_NWRLFFFFEFW_					0	0	0			REV__ENST00000324348.8_2_17:7818314-7818512:-|nuORF	REV__ENST00000324348.8_2_17:7818314-7818512:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.9329833984375	3	546.934595	1637.78196	-0.39258	-0.00021472	-3.8029	-0.00208	-4.1955	-0.0022947	546.9325137788906	38.483	0.5722	38.433	38.161	38.733	-0.050373					27	12	3	0	0	0	0.80593	1	2692	2692		10.104	4.4051	1	137590	+		39797	25046	26480	26492	45357	45357					-0.011423973434375512
NWRLFFFFEFW	11	Unmodified	_NWRLFFFFEFW_					0	0	0			REV__ENST00000324348.8_2_17:7818314-7818512:-|nuORF	REV__ENST00000324348.8_2_17:7818314-7818512:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	546.934595	1637.78196	-0.39258	-0.00021472	-3.8029	-0.00208	-4.1955	-0.0022947	546.9325137788906	38.483	0.5722	38.433	38.161	38.733	-0.050373	-0.058932	-0.00022766	NaN	10.104	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137590	+		39798	25046	26480	26492							-0.011423973434375512
NWRPLLAL	8	Unmodified	_NWRPLLAL_					0	0	0			REV__ENST00000262461.6_1_5:127523892-127524048:+|nuORF	REV__ENST00000262461.6_1_5:127523892-127524048:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7973937988281	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.678	1	64.803	64.303	65.303	0.12545								0	0	0	0.29568	1	5706	5706		35.201	6.9464	1		+		39799	24421	26481	26493	45358	45358					0.08446074267976655
NWTRRRRFIQY	11	Unmodified	_NWTRRRRFIQY_					0	0	0		ENST00000529590.5_1_11:68034666-68035676:-|nuORF	ENST00000529590.5_1_11:68034666-68035676:-|nuORF	ENST00000529590.5_1_11:68034666-68035676:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.6305541992188	3	532.627047	1594.85931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.457	1	32.451	31.951	32.951	-0.0061455								0	0	0	0.56276	1	1845	1845		14.086	5.2867	1				39800	13329	26482	26494	45359	45359					0.08567633645498063
NWVYWAGQH	9	Unmodified	_NWVYWAGQH_					0	0	0			REV__ENSG00000163295|ENST00000295463|ALPI	REV__ENSG00000163295|ENST00000295463|ALPI	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.8655395507812	2	580.76724	1159.51993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.566	1	77.703	77.203	78.203	0.13667								0	0	0	0.28386	1	7291	7291		37.159	4.3467	1		+		39801	20895	26483	26495	45360	45360					-0.053451786394816736
NYDEALRLL	9	Unmodified	_NYDEALRLL_					0	0	0		ENST00000595288.5_1_19:7687207-7690948:-|nuORF;ENSG00000076924|ENST00000358368|XAB2	ENST00000595288.5_1_19:7687207-7690948:-|nuORF	ENST00000595288.5_1_19:7687207-7690948:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.7953491210938	2	553.795663	1105.57677	-1.1091	-0.00061423	-0.14458	-8.0067E-05	-1.2537	-0.00069429	553.7962542953013	71.908	1.7842	72.293	71.504	73.288	0.38519					127	42	6	0	0	0	0.059241	3	8066	8054;8066;8077		104.01	38.367	1	1264400			39802	1368	26484	26496	45361;45362;45363	45362					0.028208241263882883
NYDEALRLL	9	Unmodified	_NYDEALRLL_					0	0	0		ENST00000595288.5_1_19:7687207-7690948:-|nuORF;ENSG00000076924|ENST00000358368|XAB2	ENST00000595288.5_1_19:7687207-7690948:-|nuORF	ENST00000595288.5_1_19:7687207-7690948:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.7959594726562	2	553.795663	1105.57677	-0.14197	-7.862E-05	-1.1138	-0.00061684	-1.2558	-0.00069546	553.7956902824818	71.77	1.9369	72.32	71.66	73.597	0.55009					121	46	4	0	0	0	0.0017431	5	8060	8037;8060;8074;8086;8098		143.37	70.494	1	1387300			39803	1368	26484	26496	45364;45365;45366;45367;45368	45365					0.028208241263882883
NYDLALKYF	9	Unmodified	_NYDLALKYF_					0	0	0		ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.7962036132812	2	573.795132	1145.57571	-0.0863	-4.9518E-05	0.042826	2.4573E-05	-0.043474	-2.4945E-05	573.7951303080222	76.545	0.62527	76.945	76.7	77.325	0.39969					44	20	3	0	0	0	0.059135	2	8696	8684;8696		104.06	40.523	1	1070600			39804	1257	26485	26497	45369;45370	45370					0.008746097574658052
NYDLALKYF	9	Unmodified	_NYDLALKYF_					0	0	0		ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.795166015625	2	573.795132	1145.57571	-0.10384	-5.9581E-05	0.1481	8.4979E-05	0.044264	2.5399E-05	573.7951348569522	76.438	0.62511	77.006	76.683	77.308	0.56836					43	19	3	0	0	0	0.059135	3	8695	8695;8707;8716		104.06	45.275	1	1140900			39805	1257	26485	26497	45371;45372;45373	45371					0.008746097574658052
NYHIFCLLP	9	Unmodified	_NYHIFCLLP_					0	0	0		nc|ENSG00000012817|Q9BY66-2|KDM5D;ENSG00000012817|ENST00000317961|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D;nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C;ENSG00000126012|ENST00000375401|KDM5C	nc|ENSG00000012817|Q9BY66-2|KDM5D;nc|ENSG00000126012|P41229-4|KDM5C	nc|ENSG00000012817|Q9BY66-2|KDM5D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.2906494140625	2	560.28642	1118.55829	-1.1272	-0.00063153	3.5065	0.0019646	2.3793	0.0013331	560.2882669932782	78.496	1.0533	78.552	78.241	79.294	0.056114					77	30	4	0	0	0	0.69914	1	7666	7666		40.573	2.7611	1	910100			39806	804;3437	26486	26498	45374	45374					0.003749909508314886
NYILIYLLVLF	11	Unmodified	_NYILIYLLVLF_					0	0	0			REV__ENSG00000168038|ENST00000301831|ULK4	REV__ENSG00000168038|ENST00000301831|ULK4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	461.94903564453125	3	461.94773	1382.82136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.19	1	113.21	112.71	113.71	0.027321								0	0	0	0.56276	1	12363	12363		14.694	2.7613	1		+		39807	21454	26487	26499	45375	45375					0.14526309887446587
NYIRPRTLQ	9	Unmodified	_NYIRPRTLQ_					0	0	0		ENSG00000128564|ENST00000249330|VGF	ENSG00000128564|ENST00000249330|VGF	ENSG00000128564|ENST00000249330|VGF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8327026367188	2	580.830372	1159.64619	-1.0916	-0.00063402	1.0392	0.00060357	-0.052414	-3.0443E-05	580.8307679449848	59.536	0.88874	60.089	59.574	60.463	0.55323					49	22	3	0	0	0	0.33718	1	6253	6253		62.107	0.41614	1	1358100			39808	3548	26488	26500	45376	45376					0.07275327865818326
NYKHLGGI	8	Unmodified	_NYKHLGGI_					0	0	0		ENSG00000137494|ENST00000533342|ANKRD42	ENSG00000137494|ENST00000533342|ANKRD42	ENSG00000137494|ENST00000533342|ANKRD42	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2491455078125	2	451.248152	900.481751	-1.5029	-0.0006782	3.2139	0.0014503	1.711	0.00077208	451.24948444631724	65.955	1.2112	65.955	65.412	66.623	0					127	65	2	0	0	0	0.88915	1	5784	5784		35.201	3.2459	1	815400			39809	4204	26489	26501	45377	45377					0.02752935445869298
NYKLITPAVV	10	Unmodified	_NYKLITPAVV_					0	0	0		ENSG00000118181|ENST00000527673|RPS25	ENSG00000118181|ENST00000527673|RPS25	ENSG00000118181|ENST00000527673|RPS25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	559.3346557617188	2	559.334424	1116.6543	0.12373	6.9204E-05	2.9472	0.0016485	3.0709	0.0017177	559.3359036293601	31.463	0.74524	31.412	31.127	31.872	-0.051031					35	16	3	0	0	0	0.86718	1	1804	1804		27.882	1.1893	1	118640			39810	3015	26490	26502	45378	45378					0.10063462062544204
NYKLITPAVV	10	Unmodified	_NYKLITPAVV_					0	0	0		ENSG00000118181|ENST00000527673|RPS25	ENSG00000118181|ENST00000527673|RPS25	ENSG00000118181|ENST00000527673|RPS25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	559.3363647460938	2	559.334424	1116.6543	0.62839	0.00035148	2.4879	0.0013916	3.1163	0.001743	559.3355410265135	31.357	0.71754	31.347	31.001	31.719	-0.010656					34	16	3	0	0	0	0.86218	1	1717	1717		32.812	2.3088	1	100350			39811	3015	26490	26502	45379	45379					0.10063462062544204
NYLLHMILDLD	11	Unmodified	_NYLLHMILDLD_					0	0	0			REV__ENSG00000047188|ENST00000161863|YTHDC2	REV__ENSG00000047188|ENST00000161863|YTHDC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.9033508300781	3	453.904084	1358.69042	-0.31127	-0.00014129	-2.4642	-0.0011185	-2.7755	-0.0012598	453.90286762187236	27.348	0.63192	27.309	27.041	27.673	-0.038525					33	14	3	0	0	0	0.74405	1	1303	1303		23.378	0.81632	1	63904	+		39812	16347	26491	26503	45380	45380					0.025425511771345555
NYLLSSFIKRL	11	Unmodified	_NYLLSSFIKRL_					0	0	0			REV__ENST00000476385.1_1_3:142660339-142660513:+|nuORF	REV__ENST00000476385.1_1_3:142660339-142660513:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9326171875	3	451.934484	1352.78162	-0.99129	-0.000448	-2.9992	-0.0013554	-3.9905	-0.0018034	451.9330862164875	100.92	2.2384	100.92	100.04	102.28	0					149	53	4	0	0	0	0.75779	1	10309	10309		20.315	4.3082	1	534780	+		39813	27330	26492	26504	45381	45381					0.1193418293673858
NYLPVAGKLA	10	Unmodified	_NYLPVAGKLA_					0	0	0			REV__ENST00000464428.2_1_1:177898995-177929556:-|nuORF	REV__ENST00000464428.2_1_1:177898995-177929556:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3036499023438	2	523.305667	1044.59678	-0.17027	-8.9103E-05	-3.7085	-0.0019407	-3.8788	-0.0020298	523.3036223327587	91.376	2.6869	91.596	91.26	93.946	0.22013					111	63	2	0	0	0	0.8608	1	9204	9204		34.173	2.2177	1	1188800	+		39814	18410	26493	26505	45382	45382					0.0762661985700106
NYMRPLHK	8	Unmodified	_NYMRPLHK_					0	0	0			REV__nc|ENSG00000157657|Q5T7W0-2|ZNF618	REV__nc|ENSG00000157657|Q5T7W0-2|ZNF618	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.7808227539062	2	529.781836	1057.54912	-0.3691	-0.00019554	-0.84661	-0.00044852	-1.2157	-0.00064407	529.7811640199199	55.532	0.95031	55.495	55.207	56.157	-0.036827					76	33	3	0	0	0	0.87922	1	4674	4674		31.955	0	1	498070	+		39815	29956	26494	26506	45383	45383					0.022646423851483632
NYMRVSRR	8	Unmodified	_NYMRVSRR_					0	0	0			REV__nc|ENSG00000156510|Q2TB90-3|HKDC1	REV__nc|ENSG00000156510|Q2TB90-3|HKDC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	541.28662109375	2	541.287817	1080.56108	-1.7029	-0.00092177	-2.7026	-0.0014629	-4.4055	-0.0023847	541.2862100780545	20.29	0.5934	20.29	20.067	20.66	0					57	27	3	0	0	0	0.89962	1	475	475		38.806	0.99462	1	123340	+		39816	20494	26495	26507	45384	45384					0.024022591283483052
NYPHNNRELQF	11	Unmodified	_NYPHNNRELQF_					0	0	0			REV__ENST00000462715.1_1_1:36602709-36602835:-|nuORF	REV__ENST00000462715.1_1_1:36602709-36602835:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.8996887207031	3	477.89698	1430.66911	1.1199	0.00053521	2.8664	0.0013699	3.9864	0.0019051	477.89851385441466	23.518	0.56494	23.137	22.8	23.365	-0.38178					18	12	2	0	0	0	0.76251	1	1058	1058		19.263	0.73163	1	70869	+		39817	27061	26496	26508	45385	45385					-0.02899697807379198
NYPHNNRELQF	11	Unmodified	_NYPHNNRELQF_					0	0	0			REV__ENST00000462715.1_1_1:36602709-36602835:-|nuORF	REV__ENST00000462715.1_1_1:36602709-36602835:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	477.89698	1430.66911	1.1199	0.00053521	2.8664	0.0013699	3.9864	0.0019051	477.89851385441466	23.518	0.56494	23.137	22.8	23.365	-0.38178	0.13092	-0.0016072	NaN	19.263	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70869	+		39818	27061	26496	26508							-0.02899697807379198
NYPHNNRELQF	11	Unmodified	_NYPHNNRELQF_					0	0	0			REV__ENST00000462715.1_1_1:36602709-36602835:-|nuORF	REV__ENST00000462715.1_1_1:36602709-36602835:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	477.89698	1430.66911	0.078079	3.7314E-05	4.3057	0.0020577	4.3838	0.002095	478.23349497254884	23.449	0.51615	22.875	22.62	23.136	-0.57415	-0.13092	0.00045627	NaN	19.263	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80520	+		39819	27061	26496	26508							-0.02899697807379198
NYTKSLAVY	9	Unmodified	_NYTKSLAVY_					0	0	0			REV__ENSG00000163283|ENST00000392027|ALPP	REV__ENSG00000163283|ENST00000392027|ALPP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7811279296875	2	529.779482	1057.54441	0.70032	0.00037101	2.5295	0.0013401	3.2298	0.0017111	529.7806785295993	51.421	0.82317	52.164	51.849	52.672	0.7429					43	19	3	0	0	0	0.67345	1	5127	5127		42.396	9.5837	1	1458900	+		39820	20892	26497	26509	45386	45386					0.017940367233904908
PAAAGGGG	8	Unmodified	_PAAAGGGG_					0	0	0		nc|ENSG00000162946|Q9NRI5-2|DISC1;ENSG00000162946|ENST00000439617|DISC1;nc|ENSG00000162946|Q9NRI5-11|DISC1;nc|ENSG00000162946|Q9NRI5-10|DISC1;nc|ENSG00000162946|Q9NRI5-4|DISC1;nc|ENSG00000162946|Q9NRI5-7|DISC1;nc|ENSG00000162946|Q9NRI5-6|DISC1;nc|ENSG00000162946|Q9NRI5-9|DISC1;nc|ENSG00000162946|Q9NRI5-3|DISC1;nc|ENSG00000162946|Q9NRI5-8|DISC1;nc|ENSG00000162946|Q9NRI5-5|DISC1	nc|ENSG00000162946|Q9NRI5-2|DISC1	nc|ENSG00000162946|Q9NRI5-2|DISC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.23681640625	1	557.267801	556.260525	0.16292	9.0787E-05	-2.0937	-0.0011667	-1.9308	-0.001076	557.2690680246111	28.318	0.14074	28.278	28.208	28.349	-0.039907					4	2	2	0	0	0	0.4196	1	1415	1415		1.619	0	1	8113.8			39821	5753	26498	26510	45387	45387					-0.03535504530623257
PAAARSCAVR	10	Carbamidomethyl (C)	_PAAARSC(Carbamidomethyl (C))AVR_	PAAARSC(1)AVR		PAAARSC(48)AVR		0	1	0			REV__ENST00000484285.2_1_9:38622091-38622535:+|nuORF	REV__ENST00000484285.2_1_9:38622091-38622535:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7813110351562	2	529.779825	1057.5451	0.45896	0.00024315	2.055	0.0010887	2.5139	0.0013318	529.7806261653575	52.825	1.5318	53.249	52.638	54.169	0.42348					117	36	6	0	0	0	0.63899	1	5320	5320		47.96	7.1814	1	6482700	+		39822	27509	26499	26511	45388	45388	336				0.01862552891429914
PAAGRPLH	8	Unmodified	_PAAGRPLH_					0	0	0			REV__ENST00000493497.1_1_20:32376535-32379320:+|nuORF	REV__ENST00000493497.1_1_20:32376535-32379320:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.29205322265625	2	409.735212	817.455871	1.5531	0.00063634	-0.97376	-0.00039899	0.57929	0.00023736	409.73468759008193	19.209	0.31947	18.739	18.563	18.882	-0.46967					9	6	2	0	0	0	0.4196	1	493	493		35.201	0	1	24021	+		39823	27694	26500	26512	45389	45389					0.03984085994216002
PAAHTCPE	8	Unmodified	_PAAHTCPE_					0	0	0			REV__ENST00000583277.1_1_17:7468610-7469096:+|nuORF	REV__ENST00000583277.1_1_17:7468610-7469096:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1832275390625	2	413.18162	824.348688	1.3894	0.00057407	1.3241	0.0005471	2.7135	0.0011212	413.18241572168455	98.2	1.7988	98.577	97.389	99.188	0.37679					98	43	5	0	0	0	0.88915	1	11851	11851		35.201	0	1	2907700	+		39824	29068	26501	26513	45390	45390					-0.07051252002304409
PAAHTCPE	8	Unmodified	_PAAHTCPE_					0	0	0			REV__ENST00000583277.1_1_17:7468610-7469096:+|nuORF	REV__ENST00000583277.1_1_17:7468610-7469096:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1836853027344	2	413.18162	824.348688	2.0036	0.00082786	1.8965	0.0007836	3.9001	0.0016115	413.18277054138287	99.966	1.3545	100.32	99.907	101.26	0.35072					93	33	4	0	0	0	0.9159	1	12096	12096		44.531	0	1	6662300	+		39825	29068	26501	26513	45391	45391					-0.07051252002304409
PAAHTCPE	8	Unmodified	_PAAHTCPE_					0	0	0			REV__ENST00000583277.1_1_17:7468610-7469096:+|nuORF	REV__ENST00000583277.1_1_17:7468610-7469096:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	413.18162	824.348688	-1.9118	-0.00078993	6.34	0.0026196	4.4282	0.0018297	413.1841033392194	100.08	0.79579	100.25	99.928	100.72	0.17199	-0.0258	0.0020216	NaN	44.531	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161600	+		39826	29068	26501	26513							-0.07051252002304409
PAAIIASSL	9	Unmodified	_PAAIIASSL_					0	0	0			REV__ENSG00000130287|ENST00000252575|NCAN	REV__ENSG00000130287|ENST00000252575|NCAN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.750732421875	2	421.752736	841.490919	-1.7853	-0.00075295	-1.0169	-0.00042889	-2.8022	-0.0011818	421.75222562050067	74.965	1.8809	75.091	73.889	75.77	0.12545					84	60	2	0	0	0	0.76996	1	6979	6979		33.516	6.7195	1	102790	+		39827	18863	26502	26514	45392	45392					0.06383284011531032
PAAIIASSL	9	Unmodified	_PAAIIASSL_					0	0	0			REV__ENSG00000130287|ENST00000252575|NCAN	REV__ENSG00000130287|ENST00000252575|NCAN	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	421.752736	841.490919	-1.7853	-0.00075295	-1.0169	-0.00042889	-2.8022	-0.0011818	421.75222562050067	74.965	1.8809	75.091	73.889	75.77	0.12545	-0.0049735	0.00027141	NaN	33.516	84	60	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102790	+		39828	18863	26502	26514							0.06383284011531032
PAAIIASSL	9	Unmodified	_PAAIIASSL_					0	0	0			REV__ENSG00000130287|ENST00000252575|NCAN	REV__ENSG00000130287|ENST00000252575|NCAN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	421.752736	841.490919	0.1096	4.6226E-05	-2.7283	-0.0011507	-2.6187	-0.0011044	421.7514740477872	74.542	1.1662	75.101	74.412	75.578	0.55891	0.0049735	-0.0011722	NaN	33.516	42	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92915	+		39829	18863	26502	26514							0.06383284011531032
PAAILIDE	8	Unmodified	_PAAILIDE_					0	0	0			REV__nc|ENSG00000188158|Q6T4R5-4|NHS	REV__nc|ENSG00000188158|Q6T4R5-4|NHS	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.7828369140625	2	421.236919	840.459284	-1.934	-0.00081466	3.4881	0.0014693	1.5541	0.00065465	421.23844251829445	36.254	0.9068	36.254	36.092	36.999	0					27	20	2	0	0	0	0.4196	1	2078	2078		25.45	17.76	1	51660	+		39830	22982	26503	26515	45393	45393					0.03267291257566285
PAAIRARRFG	10	Unmodified	_PAAIRARRFG_					0	0	0		ENST00000342854.9_2_5:133450446-133450680:+|nuORF	ENST00000342854.9_2_5:133450446-133450680:+|nuORF	ENST00000342854.9_2_5:133450446-133450680:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.8299560546875	2	557.833249	1113.65194	-0.9931	-0.00055398	-3.3783	-0.0018845	-4.3714	-0.0024385	557.83140422783	101.17	1.502	101.2	100.79	102.29	0.031036					74	35	3	0	0	0	0.85939	1	10812	10812		23.042	0.46283	1	902020			39831	10268	26504	26516	45394	45394					0.099664711681271
PAAKKHALF	9	Unmodified	_PAAKKHALF_					0	0	0			REV__CON__Q3SZ57	REV__CON__Q3SZ57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.2958068847656	2	491.795269	981.575986	0.44364	0.00021818	-0.6083	-0.00029916	-0.16465	-8.0976E-05	491.7950876173739	61.702	0.68761	61.821	61.679	62.366	0.11901					43	29	2	0	0	0	0.7932	1	5391	5391		26.796	0.10319	1	220410	+	+	39832	16013	26505	26517	45395	45395					0.08446074267988024
PAAKMEMEIE	10	Oxidation (M)	_PAAKMEM(Oxidation (M))EIE_		PAAKM(0.027)EM(0.973)EIE		PAAKM(-16)EM(16)EIE	0	0	1			REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-11|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.7702026367188	2	582.7674	1163.52025	-0.26436	-0.00015406	4.2646	0.0024853	4.0002	0.0023312	582.7697552354008	52.286	0.64261	52.263	51.979	52.621	-0.023853					30	14	3	0	0	0	0.51302	1	4638	4638		54.776	7.119	2	169680	+		39833	29946	26506	26518	45396	45396		437			-0.054973078168131906
PAAKTPAKVAA	11	Unmodified	_PAAKTPAKVAA_					0	0	0			REV__ENST00000447479.2_1_1:197705144-197705183:+|nuORF	REV__ENST00000447479.2_1_1:197705144-197705183:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.3788452148438	2	512.811116	1023.60768	0.023555	1.2079E-05	-1.3488	-0.00069169	-1.3253	-0.00067961	512.8106155661413	85.383	0.5183	85.83	85.509	86.027	0.44736					18	12	2	0	0	0	0.17692	1	10027	10027		28.081	8.978	1	76730	+		39834	26820	26507	26519	45397	45397					0.09682022231277188
PAALARLDR	9	Unmodified	_PAALARLDR_					0	0	0			REV__ENST00000451719.5_3_14:105957603-105958516:+|nuORF	REV__ENST00000451719.5_3_14:105957603-105958516:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7959899902344	2	491.793258	981.571963	0.28747	0.00014138	3.582	0.0017616	3.8695	0.001903	491.7949445341918	43.378	1.3778	43.351	42.925	44.303	-0.026764					56	32	2	0	0	0	0.78124	1	3308	3308		30.318	1.1477	1	173750	+		39835	26888	26508	26520	45398	45398					0.08043984774280943
PAALGRLK	8	Unmodified	_PAALGRLK_					0	0	0			REV__chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	REV__chr2:19960614-19962295|18|17.39|0.33|5.71|-|ENST00000414212|WDR35,WDR35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2665100097656	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.81724	1	2397	2397		14.664	0	1	268720	+		39836	15748	26509	26521	45399	45399					0.10394116205179671
PAALKPKV	8	Unmodified	_PAALKPKV_					0	0	0		ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.26959228515625	2	412.273638	822.532724	-1.9053	-0.0007855	-3.4459	-0.0014207	-5.3512	-0.0022062	412.2698883479469	38.725	0.12881	38.736	38.658	38.786	0.010708					5	3	2	0	0	0	0.4196	1	2315	2315		8.2313	0	1	10460			39837	3743	26510	26522	45400	45400					0.1143588449069739
PAALLALLLL	10	Unmodified	_PAALLALLLL_					0	0	0			REV__ENSG00000185442|ENST00000327355|FAM174B	REV__ENSG00000185442|ENST00000327355|FAM174B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3425598144531	2	504.346803	1006.67905	1.0557	0.00053246	-3.8818	-0.0019578	-2.8261	-0.0014253	504.3447732141236	56.244	2.3019	56.803	56.541	58.843	0.55954					121	55	3	0	0	0	0.85976	1	5821	5821		35.201	3.6709	1	1272700	+		39838	22765	26511	26523	45401	45401					0.175981419359573
PAALLALLLL	10	Unmodified	_PAALLALLLL_					0	0	0			REV__ENSG00000185442|ENST00000327355|FAM174B	REV__ENSG00000185442|ENST00000327355|FAM174B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	504.346803	1006.67905	-0.51579	-0.00026014	-2.1778	-0.0010984	-2.6936	-0.0013585	504.34560043382686	56.917	0.13668	56.989	56.919	57.056	0.071835	0.093124	0.0016628	NaN	35.201	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93480	+		39839	22765	26511	26523							0.175981419359573
PAALPLPTWS	10	Unmodified	_PAALPLPTWS_					0	0	0			REV__nc|ENSG00000176170|Q9NYA1-2|SPHK1	REV__nc|ENSG00000176170|Q9NYA1-2|SPHK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.804931640625	2	526.792392	1051.57023	0.53041	0.00027942	1.3047	0.00068733	1.8352	0.00096674	526.7929213721358	16.636	0.27581	16.026	15.866	16.142	-0.6107					9	5	2	0	0	0	0.37624	1	154	154		23.042	15.849	1	87958	+		39840	30050	26512	26524	45402	45402					0.046509309656585174
PAALVLQL	8	Unmodified	_PAALVLQL_					0	0	0			REV__ENST00000531243.2_1_1:40041622-40042411:-|nuORF	REV__ENST00000531243.2_1_1:40041622-40042411:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7663879394531	2	412.765646	823.516739	1.0742	0.00044338	1.0077	0.00041595	2.0819	0.00085933	412.7659693172007	40.207	1.4192	40.217	39.687	41.106	0.0092812					79	35	3	0	0	0	0.81724	1	2885	2885		14.664	0	1	573960	+		39841	28297	26513	26525	45403	45403					0.09792178253815109
PAAPLEHL	8	Unmodified	_PAAPLEHL_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.2502746582031	2	424.237253	846.459953	4.6817	0.0019862	-4.3755	-0.0018563	0.30621	0.0001299	424.23440663075917	107.08	0.33904	107.23	107.07	107.4	0.14929					12	9	2	0	0	0	0.4196	1	13118	13118		31.579	18.62	1	130720			39842	720	26514	26526	45404	45404					0.030581306972862876
PAAPSPVLQLP	11	Unmodified	_PAAPSPVLQLP_					0	0	0		ENST00000456585.5_1_6:168397599-168397749:-|nuORF	ENST00000456585.5_1_6:168397599-168397749:-|nuORF	ENST00000456585.5_1_6:168397599-168397749:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3173828125	2	545.318774	1088.623	-0.33932	-0.00018504	-3.4934	-0.001905	-3.8327	-0.00209	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.67778	1	8815	8815		35.152	0.97948	1	4710900			39843	11969	26515	26527	45405	45405					0.08222889028479585
PAARKKAGT	9	Unmodified	_PAARKKAGT_					0	0	0			REV__ENSG00000131747|ENST00000423485|TOP2A	REV__ENSG00000131747|ENST00000423485|TOP2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2742614746094	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.74721	1	9532	9532		37.159	9.2769	1	26247000	+		39844	18961	26516	26528	45406	45406					0.08152313228526964
PAARRERR	8	Unmodified	_PAARRERR_					0	0	0		ENST00000264350.7_1_4:89378587-89380504:+|nuORF	ENST00000264350.7_1_4:89378587-89380504:+|nuORF	ENST00000264350.7_1_4:89378587-89380504:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.3005065917969	2	506.299573	1010.58459	-0.057036	-2.8877E-05	2.7972	0.0014162	2.7402	0.0013874	506.3009364840715	96.693	1.2093	96.756	96.133	97.342	0.062225					68	27	3	0	0	0	0.87422	1	10189	10189		30.318	2.2362	1	463280			39845	9477	26517	26529	45407	45407					0.07972440957178151
PAASLGAG	8	Unmodified	_PAASLGAG_					0	0	0			REV__ENST00000572240.5_1_16:3078109-3079857:-|nuORF	REV__ENST00000572240.5_1_16:3078109-3079857:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	643.40185546875	1	643.340966	642.33369	5.3145	0.003419	-0.96517	-0.00062093	4.3493	0.0027981	643.3401400720307	105.18	0.82388	105.41	105.08	105.91	0.22681					34	19	2	0	0	0	0.4196	1	12885	12885		20.482	0	1	416660	+		39846	28944	26518	26530	45408	45408					-0.0017837580799096031
PAASLGAG	8	Unmodified	_PAASLGAG_					0	0	0			REV__ENST00000572240.5_1_16:3078109-3079857:-|nuORF	REV__ENST00000572240.5_1_16:3078109-3079857:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		1	643.340966	642.33369	1.777	0.0011432	8.293	0.0053353	10.07	0.0064785	643.3453700089216	105.51	0.16345	105.55	105.43	105.59	0.038322	0.1136	0.0045676	NaN	20.482	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25544	+		39847	28944	26518	26530							-0.0017837580799096031
PAASRRKAKQV	11	Unmodified	_PAASRRKAKQV_					0	0	0			REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF	REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.5829162597656	3	404.582556	1210.72584	-0.33509	-0.00013557	0.65931	0.00026675	0.32422	0.00013117	404.58283935188774	30.988	0.89448	30.941	30.538	31.432	-0.047064					48	22	3	0	0	0	0.73893	1	1748	1748		16.53	0	1	104710	+		39848	20148	26519	26531	45409	45409					0.12890394539772387
PAATIIIGL	9	Unmodified	_PAATIIIGL_					0	0	0		ENST00000502692.5_1_11:66313918-66328094:+|nuORF	ENST00000502692.5_1_11:66313918-66328094:+|nuORF	ENST00000502692.5_1_11:66313918-66328094:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78021240234375	2	434.778754	867.542954	0.13644	5.932E-05	2.2845	0.00099327	2.421	0.0010526	434.77963633612353	39.861	1.5425	39.83	39.322	40.865	-0.03027					156	40	5	0	0	0	0.69914	1	2784	2784		40.573	1.7665	1	4621500			39849	12860	26520	26532	45410	45410					0.10388447425293634
PAAVPPQAMN	10	Unmodified	_PAAVPPQAMN_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.24993896484375	2	498.252577	994.490601	-0.99209	-0.00049431	-3.1151	-0.0015521	-4.1072	-0.0020464	498.25142789231467	84.759	2.4523	84.759	83.586	86.038	0					132	57	3	0	0	0	0.86452	1	8030	8030		30.504	0	1	112180			39850	2649	26521	26533	45411	45411					-0.006864589799761234
PACLVTCVSE	10	Unmodified	_PACLVTCVSE_					0	0	0		ENST00000596663.5_1_2:56403161-56411872:-|nuORF	ENST00000596663.5_1_2:56403161-56411872:-|nuORF	ENST00000596663.5_1_2:56403161-56411872:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.2379455566406	2	511.238278	1020.462	0.048272	2.4679E-05	1.1389	0.00058224	1.1871	0.00060691	511.2387137603172	51.185	0.92873	51.183	50.685	51.614	-0.0020447					42	27	2	0	0	0	0.84112	1	4366	4366		37.159	5.2042	1	108680			39851	14339	26522	26534	45412	45412					-0.04740944671436864
PACQGDDFE	9	Unmodified	_PACQGDDFE_					0	0	0			REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1	REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.1854553222656	2	491.184557	980.354561	0.55334	0.00027179	1.1701	0.00057475	1.7235	0.00084654	491.18514969245695	73.95	0.81865	74.081	73.85	74.669	0.13126					71	31	3	0	0	0	0.7932	1	6817	6817		26.693	1.2427	1	196840	+		39852	17646	26523	26535	45413	45413					-0.13640198281314042
PADAEIFESY	10	Unmodified	_PADAEIFESY_					0	0	0			REV__ENSG00000253148|ENST00000417209|RGS21	REV__ENSG00000253148|ENST00000417209|RGS21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.2540283203125	2	571.256037	1140.49752	-1.1853	-0.0006771	1.347	0.0007695	0.16176	9.2407E-05	571.2566956700214	72.587	0.66396	72.973	72.625	73.289	0.38581					34	15	3	0	0	0	0.46422	1	8120	8120		58.782	0	1	404500	+		39853	23876	26524	26536	45414	45414					-0.06710867618426164
PADGAKSVLR	10	Unmodified	_PADGAKSVLR_					0	0	0			REV__nc|ENSG00000184226|Q9HC56-2|PCDH9	REV__nc|ENSG00000184226|Q9HC56-2|PCDH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.28936767578125	2	507.290548	1012.56654	-0.9689	-0.00049151	0.89874	0.00045592	-0.070157	-3.559E-05	507.2908682870928	29.69	1.0944	29.708	29.434	30.528	0.018192					39	24	3	0	0	0	0.82886	1	1883	1883		37.812	0.65241	1	375560	+		39854	22657	26525	26537	45415	45415					0.06076261191810772
PADLLKVL	8	Unmodified	_PADLLKVL_					0	0	0		nc|ENSG00000130635|P20908-2|COL5A1;ENSG00000130635|ENST00000371817|COL5A1;ENST00000464187.1_1_9:137545303-137583524:+|nuORF;chr9:134653479-134690912|44|12.48|0.16|6.25|+|2|COL5A1,COL5A1|1	nc|ENSG00000130635|P20908-2|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7799987792969	2	434.778754	867.542954	-0.86763	-0.00037723	3.3995	0.001478	2.5319	0.0011008	434.78009785486137	45.83	1.5338	46.301	45.603	47.137	0.47139					107	37	4	0	0	0	0.8347	1	4336	4336		23.042	0	1	3309700			39855	3662	26526	26538	45416	45416					0.10388447425293634
PADTGFAF	8	Unmodified	_PADTGFAF_					0	0	0		ENSG00000105722|ENST00000222329|ERF;ENST00000596818.1_1_19:42754481-42759151:-|nuORF	ENSG00000105722|ENST00000222329|ERF	ENSG00000105722|ENST00000222329|ERF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.19384765625	2	413.192511	824.370469	0.071072	2.9367E-05	1.54	0.00063633	1.6111	0.00066569	413.19345857081765	82.462	1.3534	82.936	82.432	83.785	0.47383					89	32	5	0	0	0	0.86791	1	9653	9653		28.254	0	1	2653900			39856	2246	26527	26539	45417	45417					-0.04874123982085621
PAEEPRSY	8	Unmodified	_PAEEPRSY_					0	0	0		ENSG00000130309|ENST00000252599|COLGALT1	ENSG00000130309|ENST00000252599|COLGALT1	ENSG00000130309|ENST00000252599|COLGALT1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	474.23516845703125	2	474.724707	947.43486	0.22768	0.00010809	-0.12182	-5.783E-05	0.10586	5.0255E-05	474.7244604045483	39.705	0.52374	39.794	39.53	40.053	0.088371					23	12	3	0	0	0	0.4196	1	2460	2460		37.159	0	1	132630			39857	3636	26528	26540	45418	45418					-0.04095968895956048
PAEFVECD	8	Unmodified	_PAEFVECD_					0	0	0			REV__nc|ENSG00000196296|O14983-3|ATP2A1	REV__nc|ENSG00000196296|O14983-3|ATP2A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.2386169433594	2	455.186568	908.358584	0.39601	0.00018026	3.9735	0.0018087	4.3695	0.0019889	455.18818335511315	27.759	0.76551	27.795	27.326	28.091	0.03607					43	25	3	0	0	0	0.4196	1	1250	1250		18.324	0	1	88677	+		39858	23113	26529	26541	45419	45419					-0.09926108787601606
PAEIDLLLI	9	Unmodified	_PAEIDLLLI_					0	0	0		ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.8032531738281	2	498.802426	995.590298	-0.34217	-0.00017068	2.8873	0.0014402	2.5451	0.0012695	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.77546	1	4133	4133		31.955	5.1588	1	2538600			39859	3056	26530	26542	45420	45420					0.0923268190562112
PAERVAEFRRA	11	Unmodified	_PAERVAEFRRA_					0	0	0		ENSG00000134815|ENST00000328771|DHX34	ENSG00000134815|ENST00000328771|DHX34	ENSG00000134815|ENST00000328771|DHX34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.8835754394531	3	434.573949	1300.70002	1.8719	0.00081349	-2.5445	-0.0011058	-0.67263	-0.00029231	434.57280279650445	28.504	0.67727	28.482	28.116	28.794	-0.021852					23	15	2	0	0	0	0.73277	1	1349	1349		25.892	5.0546	1	44543			39860	3960	26531	26543	45421	45421					0.06169500297505692
PAERVAEFRRA	11	Unmodified	_PAERVAEFRRA_					0	0	0		ENSG00000134815|ENST00000328771|DHX34	ENSG00000134815|ENST00000328771|DHX34	ENSG00000134815|ENST00000328771|DHX34	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	434.573949	1300.70002	-0.34965	-0.00015195	-0.56469	-0.0002454	-0.91433	-0.00039735	434.57377738704616	28.395	0.72486	28.355	27.878	28.603	-0.039906	-0.063551	0.0018643	NaN	25.892	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36769			39861	3960	26531	26543							0.06169500297505692
PAESALPGPSQ	11	Unmodified	_PAESALPGPSQ_					0	0	0		ENST00000565539.5_1_16:57684180-57697491:+|nuORF	ENST00000565539.5_1_16:57684180-57697491:+|nuORF	ENST00000565539.5_1_16:57684180-57697491:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3614501953125	2	527.264196	1052.51384	0.62134	0.00032761	-1.0724	-0.00056545	-0.45108	-0.00023784	527.2637372393846	32.726	0.34184	32.853	32.634	32.975	0.12642					12	7	2	0	0	0	0.17574	1	2317	2317		41.427	7.2541	1	127770			39862	13917	26532	26544	45422	45422					-0.01031741661677188
PAFGVRVA	8	Unmodified	_PAFGVRVA_					0	0	0		ENST00000492819.1_1_3:47017841-47018099:-|nuORF	ENST00000492819.1_1_3:47017841-47018099:-|nuORF	ENST00000492819.1_1_3:47017841-47018099:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.7393798828125	2	408.739963	815.465373	-1.9297	-0.00078873	1.2966	0.00052999	-0.63302	-0.00025874	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.87276	1	2087	2087		29.842	1.5873	1	521170			39863	12707	26533	26545	45423	45423					0.0502585427974509
PAFGVRVA	8	Unmodified	_PAFGVRVA_					0	0	0		ENST00000492819.1_1_3:47017841-47018099:-|nuORF	ENST00000492819.1_1_3:47017841-47018099:-|nuORF	ENST00000492819.1_1_3:47017841-47018099:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.739013671875	2	408.739963	815.465373	-1.0833	-0.00044277	0.59228	0.00024209	-0.49098	-0.00020068	408.74010288341543	37.409	2.2746	37.356	36.961	39.236	-0.053558					112	51	3	0	0	0	0.83466	2	2550	2550;2586		23.037	1.3344	1	289290			39864	12707	26533	26545	45424;45425	45424					0.0502585427974509
PAFGVRVA	8	Unmodified	_PAFGVRVA_					0	0	0		ENST00000492819.1_1_3:47017841-47018099:-|nuORF	ENST00000492819.1_1_3:47017841-47018099:-|nuORF	ENST00000492819.1_1_3:47017841-47018099:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.73919677734375	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.83466	2	2087	1980;2087		29.842	1.5873	1	1364200			39865	12707	26533	26545	45426;45427	45427					0.0502585427974509
PAFGVRVA	8	Unmodified	_PAFGVRVA_					0	0	0		ENST00000492819.1_1_3:47017841-47018099:-|nuORF	ENST00000492819.1_1_3:47017841-47018099:-|nuORF	ENST00000492819.1_1_3:47017841-47018099:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7393493652344	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.83466	2	1926	1926;1973		29.842	8.8946	1	1448600			39866	12707	26533	26545	45428;45429	45428					0.0502585427974509
PAFGVRVA	8	Unmodified	_PAFGVRVA_					0	0	0		ENST00000492819.1_1_3:47017841-47018099:-|nuORF	ENST00000492819.1_1_3:47017841-47018099:-|nuORF	ENST00000492819.1_1_3:47017841-47018099:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7395324707031	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.86791	1	1996	1996		28.254	1.4582	1	1654100			39867	12707	26533	26545	45430	45430					0.0502585427974509
PAFTEVDNPAS	11	Unmodified	_PAFTEVDNPAS_					0	0	0		ENST00000489713.5_1_13:101277731-101290025:-|nuORF;ENST00000462211.5_1_13:101277731-101294530:-|nuORF;nc|ENSG00000125247|Q5T4D3-2|TMTC4;nc|ENSG00000125247|Q5T4D3-4|TMTC4;nc|ENSG00000125247|Q5T4D3|TMTC4;ENSG00000125247|ENST00000342624|TMTC4	ENST00000489713.5_1_13:101277731-101290025:-|nuORF	ENST00000489713.5_1_13:101277731-101290025:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3566284179688	2	574.266936	1146.51932	-1.0379	-0.00059601	1.6892	0.00097005	0.65135	0.00037405	574.2679555287965	101.91	7.362	101.93	99.773	107.14	0.01989					246	175	2	0	0	0	0.17551	1	10646	10646		45.972	33.161	1	256800			39868	12038	26534	26546	45431	45431					-0.04808062869847163
PAGARARLG	9	Unmodified	_PAGARARLG_					0	0	0		ENST00000439880.6_1_20:3777111-3778370:+|nuORF	ENST00000439880.6_1_20:3777111-3778370:+|nuORF	ENST00000439880.6_1_20:3777111-3778370:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7618408203125	2	434.759218	867.503883	-0.5629	-0.00024473	4.1559	0.0018068	3.593	0.0015621	434.76067973092415	87.168	2.0805	87.623	86.978	89.058	0.45429					87	50	3	0	0	0	0.78058	1	10248	10248		30.504	1.3541	1	1032200			39869	11766	26535	26547	45432	45432					0.06483159914273529
PAGCIFLL	8	Unmodified	_PAGCIFLL_					0	0	0		ENSG00000181333|ENST00000315765|HEPHL1	ENSG00000181333|ENST00000315765|HEPHL1	ENSG00000181333|ENST00000315765|HEPHL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2337341308594	2	417.233125	832.451696	0.11985	5.0006E-05	-2.0451	-0.0008533	-1.9253	-0.00080329	417.23328861254936	32.607	0.53484	32.717	32.499	33.034	0.10991					51	25	3	0	0	0	0.88393	1	1547	1547		33.493	4.3434	1	151210			39870	7382	26536	26548	45433	45433					0.0287686045630835
PAGGLPCVSP	10	Unmodified	_PAGGLPCVSP_					0	0	0			REV__ENST00000547685.5_1_12:56231631-56233583:-|nuORF	REV__ENST00000547685.5_1_12:56231631-56233583:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2326354980469	2	449.228571	896.442588	0.61452	0.00027606	3.8652	0.0017363	4.4797	0.0020124	449.2302672922752	83.471	4.8977	83.402	80.905	85.803	-0.069313					227	113	3	0	0	0	0.43769	1	8522	8522		60.972	9.6365	1	260170	+		39871	28557	26537	26549	45434	45434					-0.0097753290002629
PAGGLPCVSP	10	Unmodified	_PAGGLPCVSP_					0	0	0			REV__ENST00000547685.5_1_12:56231631-56233583:-|nuORF	REV__ENST00000547685.5_1_12:56231631-56233583:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	449.228571	896.442588	-1.1132	-0.0005001	5.8353	0.0026214	4.722	0.0021213	449.2311695021829	82.946	2.7847	83.377	82.632	85.417	0.43108	-0.030642	0.0010506	NaN	60.972	90	67	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	159680	+		39872	28557	26537	26549							-0.0097753290002629
PAGLAGRRIL	10	Unmodified	_PAGLAGRRIL_					0	0	0			REV__ENST00000460402.5_1_22:19799956-19842309:-|nuORF	REV__ENST00000460402.5_1_22:19799956-19842309:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.8204650878906	2	512.324725	1022.6349	0.32933	0.00016872	-1.9354	-0.00099155	-1.6061	-0.00082283	512.3221469976739	77.428	0.58568	77.996	77.835	78.421	0.56835					24	13	3	0	0	0	0.37624	1	8852	8852		38.806	22.333	1	186120	+		39873	25095	26538	26550	45435	45435					0.12448550562328364
PAGLSVRHA	9	Unmodified	_PAGLSVRHA_					0	0	0		ENST00000205061.9_2_16:74481415-74481883:-|nuORF	ENST00000205061.9_2_16:74481415-74481883:-|nuORF	ENST00000205061.9_2_16:74481415-74481883:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	454.2589416503906	2	454.259051	906.503549	-0.48489	-0.00022026	-1.2915	-0.00058665	-1.7763	-0.00080692	454.25847891502	52.014	0.93909	51.93	51.344	52.283	-0.084538					38	29	2	0	0	0	0.72402	1	4143	4143		38.806	3.1879	1	87390			39874	9103	26539	26551	45436	45436					0.04655740194414193
PAGLSVRHA	9	Unmodified	_PAGLSVRHA_					0	0	0		ENST00000205061.9_2_16:74481415-74481883:-|nuORF	ENST00000205061.9_2_16:74481415-74481883:-|nuORF	ENST00000205061.9_2_16:74481415-74481883:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	454.259051	906.503549	-1.7023	-0.00077327	0.3533	0.00016049	-1.349	-0.00061278	454.2591171755635	52.087	1.0922	52.087	51.341	52.433	0	0.068918	0.00069736	NaN	38.806	35	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40266			39875	9103	26539	26551							0.04655740194414193
PAGLSVRHA	9	Unmodified	_PAGLSVRHA_					0	0	0		ENST00000205061.9_2_16:74481415-74481883:-|nuORF	ENST00000205061.9_2_16:74481415-74481883:-|nuORF	ENST00000205061.9_2_16:74481415-74481883:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	454.259051	906.503549	-0.69269	-0.00031466	-0.78637	-0.00035722	-1.4791	-0.00067188	454.2586813953474	52.082	0.80328	52.058	51.781	52.584	-0.023598	0.040527	-0.00033805	NaN	38.806	24	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46762			39876	9103	26539	26551							0.04655740194414193
PAGLSVRHA	9	Unmodified	_PAGLSVRHA_					0	0	0		ENST00000205061.9_2_16:74481415-74481883:-|nuORF	ENST00000205061.9_2_16:74481415-74481883:-|nuORF	ENST00000205061.9_2_16:74481415-74481883:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	454.259051	906.503549	-1.2646	-0.00057444	0.056765	2.5786E-05	-1.2078	-0.00054865	454.2589767309045	51.956	1.2223	51.997	51.165	52.387	0.040592	-0.021085	0.00042795	NaN	38.806	44	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73512			39877	9103	26539	26551							0.04655740194414193
PAGPPLGLGPR	11	Unmodified	_PAGPPLGLGPR_					0	0	0			REV__ENST00000491911.5_1_9:140508423-140509541:+|nuORF	REV__ENST00000491911.5_1_9:140508423-140509541:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.304443359375	2	516.303458	1030.59236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.512	1	62.502	62.002	63.002	-0.0094147								0	0	0	0.56276	1	5800	5800		31.53	3.6476	1		+		39878	23193	26540	26552	45437	45437					0.07829155434069435
PAGRAARN	8	Unmodified	_PAGRAARN_					0	0	0			REV__ENST00000494757.5_1_17:38375603-38434474:+|nuORF	REV__ENST00000494757.5_1_17:38375603-38434474:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.7296142578125	2	406.727918	811.441283	-1.8366	-0.00074698	2.3676	0.00096298	0.53106	0.000216	406.7287979203731	76.234	2.0799	76.359	74.725	76.805	0.12485					97	60	2	0	0	0	0.81548	1	7075	7075		20.482	1.1219	1	145690	+		39879	21734	26541	26553	45438	45438					0.02802013846076079
PAGRLPRRLVC	11	Unmodified	_PAGRLPRRLVC_					0	0	0		ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.3761596679688	2	619.369141	1236.72373	1.27	0.0007866	3.1168	0.0019305	4.3868	0.0027171	619.3710394706492	101.41	0.94493	101.61	101.32	102.26	0.2058					77	22	4	0	0	0	0.72918	1	10708	10708		26.693	3.1702	1	2074300			39880	13930	26542	26554	45439	45439					0.11483642530356519
PAGTGRALS	9	Unmodified	_PAGTGRALS_					0	0	0			REV__ENST00000608721.1_1_6:161412512-161413208:-|nuORF	REV__ENST00000608721.1_1_6:161412512-161413208:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.22607421875	2	415.229959	828.445365	0.28746	0.00011936	-0.28272	-0.00011739	0.0047485	1.9717E-06	415.2300481351667	27.264	0.44155	27.089	26.926	27.367	-0.17559					17	9	3	0	0	0	0.72402	1	1550	1550		38.806	8.3025	1	105630	+		39881	29401	26543	26555	45440	45440					0.024280585491396778
PAGTGRALS	9	Unmodified	_PAGTGRALS_					0	0	0			REV__ENST00000608721.1_1_6:161412512-161413208:-|nuORF	REV__ENST00000608721.1_1_6:161412512-161413208:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	415.229959	828.445365	0.065956	2.7387E-05	5.8872	0.0024445	5.9531	0.0024719	415.2318374085853	26.699	0.091356	26.808	26.733	26.825	0.10901	-0.22046	0.00080922	NaN	38.806	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20539	+		39882	29401	26543	26555							0.024280585491396778
PAGTGRALS	9	Unmodified	_PAGTGRALS_					0	0	0			REV__ENST00000608721.1_1_6:161412512-161413208:-|nuORF	REV__ENST00000608721.1_1_6:161412512-161413208:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	415.229959	828.445365	0.26054	0.00010819	3.6841	0.0015297	3.9446	0.0016379	415.2301196072756	27.161	0.057102	27.189	27.143	27.2	0.02817	0.16026	-0.0010204	NaN	38.806	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10321	+		39883	29401	26543	26555							0.024280585491396778
PAGTGRALS	9	Unmodified	_PAGTGRALS_					0	0	0			REV__ENST00000608721.1_1_6:161412512-161413208:-|nuORF	REV__ENST00000608721.1_1_6:161412512-161413208:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	415.229959	828.445365	0.28746	0.00011936	-0.28272	-0.00011739	0.0047485	1.9717E-06	415.2300481351667	27.264	0.44155	27.089	26.926	27.367	-0.17559	0.060202	-0.0043146	NaN	38.806	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105630	+		39884	29401	26543	26555							0.024280585491396778
PAGTPRRSP	9	Unmodified	_PAGTPRRSP_					0	0	0		ENST00000603037.2_2_X:73422686-73423058:-|nuORF	ENST00000603037.2_2_X:73422686-73423058:-|nuORF	ENST00000603037.2_2_X:73422686-73423058:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7591552734375	2	469.761958	937.509363	-1.0554	-0.00049577	-1.9277	-0.00090556	-2.9831	-0.0014013	469.7608617085479	40.328	1.2889	40.334	40.071	41.36	0.0065002					73	45	3	0	0	0	0.62081	1	2616	2616		45.952	1.8352	1	435990			39885	14419	26544	26556	45441	45441					0.03810838706078812
PAHFMVLV	8	Unmodified	_PAHFMVLV_					0	0	0			REV__ENSG00000065485|ENST00000316218|PDIA5	REV__ENSG00000065485|ENST00000316218|PDIA5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30108642578125	2	457.251849	912.489145	0.19492	8.9126E-05	0.25606	0.00011708	0.45097	0.00020621	457.24991763564276	33.247	0.092018	33.214	33.15	33.242	-0.032677					8	3	3	0	0	0	0.4196	1	1596	1596		16.705	2.5678	1	26682	+		39886	16501	26545	26557	45442	45442					0.029399517219189875
PAHLGRALG	9	Unmodified	_PAHLGRALG_					0	0	0			REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	446.25982666015625	2	446.261594	890.508634	-0.45611	-0.00020354	-2.1283	-0.00094979	-2.5844	-0.0011533	446.2604729765141	37.714	2.8181	38.027	36.261	39.079	0.31312					154	69	5	0	0	0	0.7932	1	2997	2997		24.203	1.1603	1	3385700	+		39887	25249	26546	26558	45443	45443					0.059000440570343926
PAHLKRGRHH	10	Unmodified	_PAHLKRGRHH_					0	0	0		ENST00000412341.6_1_1:249150017-249153213:-|nuORF	ENST00000412341.6_1_1:249150017-249153213:-|nuORF	ENST00000412341.6_1_1:249150017-249153213:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.8471069335938	2	604.847222	1207.67989	0.86371	0.00052241	-2.5066	-0.0015161	-1.6429	-0.00099369	604.8455885108707	95.989	2.9552	96.152	95.152	98.107	0.16316					193	69	4	0	0	0	0.86201	1	9911	9911		24.203	0.68005	1	723950			39888	11337	26547	26559	45444	45444					0.08435794148226705
PAHVAARIWPA	11	Unmodified	_PAHVAARIWPA_					0	0	0		ENST00000336761.10_1_19:1428908-1433813:+|nuORF	ENST00000336761.10_1_19:1428908-1433813:+|nuORF	ENST00000336761.10_1_19:1428908-1433813:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	594.83837890625	2	594.835457	1187.65636	0.61313	0.00036471	3.7637	0.0022388	4.3769	0.0026035	594.837618327118	69.506	0.42471	69.635	69.361	69.786	0.1291					32	20	2	0	0	0	0.72228	1	6301	6301		27.882	1.8189	1	1008500			39889	10176	26548	26560	45445	45445					0.07003935591023946
PAIALAPRGGS	11	Unmodified	_PAIALAPRGGS_					0	0	0		ENSG00000164694|ENST00000297267|FNDC1;nc|ENSG00000164694|Q4ZHG4-2|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.291748046875	2	505.293091	1008.57163	0.1005	5.078E-05	-3.3009	-0.0016679	-3.2004	-0.0016171	505.29135010740674	97.203	2.3609	97.251	96.739	99.1	0.048157					135	54	4	0	0	0	0.72106	1	10321	10321		28.081	1.3886	1	1336200			39890	5993	26549	26561	45446	45446					0.0676856505442629
PAIARRVPSR	10	Unmodified	_PAIARRVPSR_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	561.8458862304688	2	561.846356	1121.67816	2.4941	0.0014013	-3.582	-0.0020125	-1.0879	-0.00061123	561.8441612955584	96.954	2.2732	96.898	96.37	98.643	-0.056381					143	52	5	0	0	0	0.8651	2	10414	10414;10446		25.574	0	1	1709600	+		39891	24039	26550	26562	45447;45448	45447					0.12218740339585565
PAIARRVPSR	10	Unmodified	_PAIARRVPSR_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.8458862304688	2	561.846356	1121.67816	1.1758	0.00066063	-2.0731	-0.0011648	-0.89731	-0.00050415	561.8450264684539	96.692	1.5682	97.097	96.665	98.233	0.40451					88	37	3	0	0	0	0.85981	1	11662	11662		35.152	2.3396	1	1298100	+		39892	24039	26550	26562	45449	45449					0.12218740339585565
PAIECHRGSF	10	Unmodified	_PAIECHRGSF_					0	0	0			REV__nc|ENSG00000162804|Q8TER0-5|SNED1	REV__nc|ENSG00000162804|Q8TER0-5|SNED1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.7677612304688	2	558.766383	1115.51821	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.534	1	72.493	71.993	72.993	-0.04039								0	0	0	0.45132	1	7088	7088		34.173	7.4796	1		+		39893	20849	26551	26563	45450	45450					-0.03492555719753909
PAILPHAAVAP	11	Unmodified	_PAILPHAAVAP_					0	0	0			REV__nc|ENSG00000134686|Q8IXK0-4|PHC2	REV__nc|ENSG00000134686|Q8IXK0-4|PHC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.3274536132812	2	528.813659	1055.61277	0.25417	0.00013441	1.517	0.00080219	1.7711	0.0009366	528.8138314337051	46.345	2.0488	46.34	45.447	47.496	-0.0041618					67	50	3	0	0	0	0.17277	1	3760	3760		24.203	0	1	122140	+		39894	19156	26552	26564	45451	45451					0.08718326093890028
PAIPKVRIK	9	Unmodified	_PAIPKVRIK_					0	0	0		ENSG00000074657|ENST00000591808|ZNF532;ENSG00000166716|ENST00000560079|ZNF592	ENSG00000074657|ENST00000591808|ZNF532;ENSG00000166716|ENST00000560079|ZNF592	ENSG00000074657|ENST00000591808|ZNF532	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.3468017578125	2	511.347669	1020.68079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.79	1	119.66	119.16	120.16	-0.12704								0	0	0	0.36148	1	14172	14172		4.3163	0	1				39895	1311;6223	26553	26565	45452	45452					0.17127195744546952
PAKAEQIEKK	10	Unmodified	_PAKAEQIEKK_					0	0	0			REV__ENSG00000154710|ENST00000284957|RABGEF1	REV__ENSG00000154710|ENST00000284957|RABGEF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.332275390625	2	571.332413	1140.65027	0.87236	0.00049841	-3.3864	-0.0019347	-2.514	-0.0014363	571.3304741505596	102.17	3.4204	102.3	101.59	105.01	0.13523					157	84	4	0	0	0	0.82886	1	10830	10830		37.812	6.2817	1	3995900	+		39896	20396	26554	26566	45453	45453					0.08557372568839128
PAKKVKAK	8	Unmodified	_PAKKVKAK_					0	0	0		ENSG00000188739|ENST00000408888|RBM34;ENST00000485019.1_1_1:235323532-235324526:-|nuORF;ENST00000486751.5_1_1:235323638-235324580:-|nuORF;nc|ENSG00000188739|P42696-2|RBM34;ENST00000476261.5_1_1:235316002-235324541:-|nuORF	ENSG00000188739|ENST00000408888|RBM34	ENSG00000188739|ENST00000408888|RBM34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3004150390625	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.83058	1	6877	6877		12.959	2.7744	1	1680500			39897	7955	26555	26567	45454	45454					0.14627262273359065
PAKREQGSLA	10	Unmodified	_PAKREQGSLA_					0	0	0		ENSG00000129204|ENST00000574788|USP6;nc|ENSG00000129204|P35125-3|USP6	ENSG00000129204|ENST00000574788|USP6	ENSG00000129204|ENST00000574788|USP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.79296875	2	528.793455	1055.57236	0.24716	0.0001307	-0.27032	-0.00014294	-0.023164	-1.2249E-05	528.7931728625157	35.978	0.73717	36.081	35.817	36.554	0.10306					58	23	4	0	0	0	0.63899	1	1982	1982		47.96	1.5027	1	664310			39898	3577	26556	26568	45455	45455					0.04679359703482078
PAKRLQLR	8	Unmodified	_PAKRLQLR_					0	0	0			REV__ENSG00000112246|ENST00000369208|SIM1	REV__ENSG00000112246|ENST00000369208|SIM1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.31683349609375	2	491.319443	980.624333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.164	1	59.164	58.664	59.664	0								0	0	0	0.3037	1	5143	5143		18.324	0.95945	1		+		39899	17933	26557	26569	45456	45456					0.133245679078982
PAKTKILP	8	Unmodified	_PAKTKILP_					0	0	0		nc|ENSG00000100207|Q9UGU0-2|TCF20;ENSG00000100207|ENST00000677622|TCF20	nc|ENSG00000100207|Q9UGU0-2|TCF20	nc|ENSG00000100207|Q9UGU0-2|TCF20	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.285888671875	2	434.286746	866.558939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.46	1	54.452	53.952	54.952	-0.0077095								0	0	0	0.29264	1	4806	4806		29.15	1.2673	1				39900	1808	26558	26570	45457	45457					0.12032153662175915
PAKTLLVP	8	Unmodified	_PAKTLLVP_					0	0	0			REV__ENST00000436287.1_1_1:224052226-224052508:-|nuORF	REV__ENST00000436287.1_1_1:224052226-224052508:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77520751953125	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.87922	2	3461	3191;3461		38.806	1.647	1	11423000	+		39901	26689	26559	26571	45458;45459	45459					0.1071246477083605
PAKTLLVP	8	Unmodified	_PAKTLLVP_					0	0	0			REV__ENST00000436287.1_1_1:224052226-224052508:-|nuORF	REV__ENST00000436287.1_1_1:224052226-224052508:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.77471923828125	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.84341	1	2966	2966		24.203	1.1603	1	9723800	+		39902	26689	26559	26571	45460	45460					0.1071246477083605
PALALLSAS	9	Unmodified	_PALALLSAS_					0	0	0		nc|ENSG00000182168|O95185-2|UNC5C;ENSG00000182168|ENST00000453304|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7516174316406	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.78058	2	7583	7583;7647		30.504	2.2494	1	579450			39903	7429	26560	26572	45461;45462	45461					0.06383284011519663
PALALPSSG	9	Unmodified	_PALALPSSG_					0	0	0			REV__ENST00000406775.6_2_7:69064374-69064902:+|nuORF	REV__ENST00000406775.6_2_7:69064374-69064902:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7268981933594	2	406.729261	811.443968	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.186	1	77.136	76.636	77.636	-0.050049								0	0	0	0.31472	1	7661	7661		25.45	0	1		+		39904	26307	26561	26573	45463	45463					0.030704244603725783
PALALTVLA	9	Unmodified	_PALALTVLA_					0	0	0			REV__ENST00000373615.8_2_9:126774341-126774419:+|nuORF	REV__ENST00000373615.8_2_9:126774341-126774419:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801208496094	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.7932	1	1781	1781		26.796	1.3459	1	2251100	+		39905	25767	26562	26574	45464	45464					0.10388447425282266
PALARRRIDL	10	Unmodified	_PALARRRIDL_					0	0	0			REV__nc|ENSG00000113971|Q7Z494-2|NPHP3	REV__nc|ENSG00000113971|Q7Z494-2|NPHP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8671264648438	2	590.867289	1179.72002	0.84845	0.00050132	-2.4301	-0.0014359	-1.5816	-0.00093454	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.74274	1	10950	10950		42.396	8.2236	1	94771000	+		39906	18023	26563	26575	45465	45465					0.13735296028130506
PALARRRIDL	10	Unmodified	_PALARRRIDL_					0	0	0			REV__nc|ENSG00000113971|Q7Z494-2|NPHP3	REV__nc|ENSG00000113971|Q7Z494-2|NPHP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.867431640625	2	590.867289	1179.72002	0.89156	0.00052679	-2.3999	-0.001418	-1.5084	-0.00089125	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.80179	1	10955	10955		39.253	1.4413	1	84183000	+		39907	18023	26563	26575	45466	45466					0.13735296028130506
PALAWRLLLET	11	Unmodified	_PALAWRLLLET_					0	0	0			REV__nc|ENSG00000230453|A2A2Z9|ANKRD18B	REV__nc|ENSG00000230453|A2A2Z9|ANKRD18B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.882568359375	2	641.87953	1281.74451	1.9607	0.0012585	2.5918	0.0016636	4.5525	0.0029222	641.8810415769531	95.839	2.2822	95.782	94.474	96.756	-0.057526					187	53	4	0	0	0	0.73893	1	10369	10369		24.519	0	1	1600600	+		39908	15934	26564	26576	45467	45467					0.11490511391002656
PALDASPEH	9	Unmodified	_PALDASPEH_					0	0	0			REV__ENSG00000173068|ENST00000380672|BNC2	REV__ENSG00000173068|ENST00000380672|BNC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232666015625	2	468.724707	935.43486	-1.2296	-0.00057635	-1.9244	-0.000902	-3.154	-0.0014784	468.7238369987016	86.792	1.5636	87.247	86.655	88.219	0.4543					99	37	4	0	0	0	0.7932	1	10217	10217		24.203	0	1	4103600	+		39909	21885	26565	26577	45468	45468					-0.03543968895951366
PALFGFLFLL	10	Unmodified	_PALFGFLFLL_					0	0	0		ENSG00000227868|ENST00000566855|TEX46;nc|ENSG00000227868|H3BTG2-2|TEX46	ENSG00000227868|ENST00000566855|TEX46	ENSG00000227868|ENST00000566855|TEX46	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.8421020507812	2	569.338978	1136.6634	0.75714	0.00043107	1.9137	0.0010895	2.6708	0.0015206	569.3400134257108	22.311	0.57802	21.892	21.652	22.23	-0.41879					31	12	3	0	0	0	0.86786	1	914	914		26.796	5.0938	1	176710			39910	8719	26566	26578	45469	45469					0.10053855418891544
PALGKRKTL	9	Unmodified	_PALGKRKTL_					0	0	0			REV__nc|ENSG00000184887|Q96KE9-2|BTBD6	REV__nc|ENSG00000184887|Q96KE9-2|BTBD6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.8428039550781	2	492.321651	982.62875	-0.077511	-3.8161E-05	3.9374	0.0019385	3.8599	0.0019003	492.3216006440528	116.43	0.055534	116.36	116.31	116.37	-0.074318					4	2	2	0	0	0	0.20789	1	12513	12513		13.775	0.81615	1	11099	+		39911	22707	26567	26579	45470	45470					0.136740323308004
PALGLPLFF	9	Unmodified	_PALGLPLFF_					0	0	0		ENST00000524669.5_1_11:57416530-57416830:-|nuORF	ENST00000524669.5_1_11:57416530-57416830:-|nuORF	ENST00000524669.5_1_11:57416530-57416830:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.79052734375	2	487.789121	973.56369	0.6235	0.00030414	1.9315	0.00094219	2.555	0.0012463	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.72098	1	7925	7925		39.021	9.18	1	479320			39912	13222	26568	26580	45471	45471					0.0758503780494948
PALHKPIP	8	Unmodified	_PALHKPIP_					0	0	0			REV__ENSG00000141579|ENST00000269394|ZNF750	REV__ENSG00000141579|ENST00000269394|ZNF750	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.77362060546875	2	436.771263	871.527973	1.4261	0.00062287	3.9463	0.0017236	5.3724	0.0023465	436.7729940973578	27.77	1.2677	27.515	27.282	28.55	-0.25465					51	30	3	0	0	0	0.88915	1	1642	1642		35.201	6.9464	1	1148800	+		39913	19702	26569	26581	45472	45472					0.08707000347931171
PALHQTQN	8	Unmodified	_PALHQTQN_					0	0	0			REV__nc|ENSG00000146373|Q8TC41-2|RNF217	REV__nc|ENSG00000146373|Q8TC41-2|RNF217	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.7335205078125	2	454.732866	907.451179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.298	1	28.258	27.758	28.758	-0.039907								0	0	0	0.30045	1	1417	1417		40.573	10.069	1		+		39914	29916	26570	26582	45473	45473					-0.00624842939203063
PALKGPRH	8	Unmodified	_PALKGPRH_					0	0	0			REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2632751464844	2	438.264136	874.51372	-1.9277	-0.00084486	0.24503	0.00010739	-1.6827	-0.00073747	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.81548	3	2493	2482;2493;2563		35.201	13.498	1	3507500	+		39915	27148	26571	26583	45474;45475;45476	45475					0.07144347919654592
PALKGPRH	8	Unmodified	_PALKGPRH_					0	0	0			REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2652282714844	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.86288	1	2998	2998		26.796	12.132	1	3384400	+		39916	27148	26571	26583	45477	45477					0.07144347919654592
PALKGPRH	8	Unmodified	_PALKGPRH_					0	0	0			REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26226806640625	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.86288	1	2751	2751		26.796	7.4361	1	3673500	+		39917	27148	26571	26583	45478	45478					0.07144347919654592
PALKGPRH	8	Unmodified	_PALKGPRH_					0	0	0			REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2632141113281	2	438.264136	874.51372	-0.25936	-0.00011367	-1.4504	-0.00063564	-1.7097	-0.00074931	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.81548	2	2909	2859;2909		26.796	7.4361	1	2361100	+		39918	27148	26571	26583	45479;45480	45480					0.07144347919654592
PALKGPRH	8	Unmodified	_PALKGPRH_					0	0	0			REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2632141113281	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.86288	1	3273	3273		26.796	5.0938	1	4268300	+		39919	27148	26571	26583	45481	45481					0.07144347919654592
PALKGPRH	8	Unmodified	_PALKGPRH_					0	0	0			REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26153564453125	2	438.264136	874.51372	-1.5833	-0.00069392	-0.15448	-6.7702E-05	-1.7378	-0.00076162	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.86288	1	2409	2409		26.796	3.7594	1	11160000	+		39920	27148	26571	26583	45482	45482					0.07144347919654592
PALKGPRH	8	Unmodified	_PALKGPRH_					0	0	0			REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2638854980469	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.86288	2	2902	2902;3126		29.842	8.1392	1	22924000	+		39921	27148	26571	26583	45483;45484	45483					0.07144347919654592
PALKGPRH	8	Unmodified	_PALKGPRH_					0	0	0			REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2613220214844	2	438.264136	874.51372	0.15263	6.689E-05	-1.9074	-0.00083592	-1.7547	-0.00076903	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.85277	2	2165	2121;2165		26.796	6.0902	1	11370000	+		39922	27148	26571	26583	45485;45486	45486					0.07144347919654592
PALKGPRH	8	Unmodified	_PALKGPRH_					0	0	0			REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2613525390625	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.81548	2	3018	3002;3018		20.482	7.5226	1	22029000	+		39923	27148	26571	26583	45487;45488	45488					0.07144347919654592
PALKGPRH	8	Unmodified	_PALKGPRH_					0	0	0			REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2620544433594	2	438.264136	874.51372	0.037237	1.632E-05	-1.83	-0.00080201	-1.7927	-0.00078569	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.81548	3	2159	2159;2179;2187		35.201	13.498	1	10667000	+		39924	27148	26571	26583	45489;45490;45491	45489					0.07144347919654592
PALKGPRH	8	Unmodified	_PALKGPRH_					0	0	0			REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	REV__ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.264404296875	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.79929	3	2849	2849;3036;3046		20.482	4.84	1	21381000	+		39925	27148	26571	26583	45492;45493;45494	45492					0.07144347919654592
PALKIGYL	8	Unmodified	_PALKIGYL_					0	0	0		ENST00000590271.5_1_18:76847676-76954399:+|nuORF;nc|ENSG00000166377|O43861-2|ATP9B;ENSG00000166377|ENST00000426216|ATP9B	ENST00000590271.5_1_18:76847676-76954399:+|nuORF	ENST00000590271.5_1_18:76847676-76954399:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7710266113281	2	437.773471	873.53239	-1.5883	-0.00069529	-3.2181	-0.0014088	-4.8063	-0.0021041	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.82464	1	2205	2205		21.702	0	1	1227500			39926	6186	26572	26584	45495	45495					0.09056464770844741
PALKPRES	8	Unmodified	_PALKPRES_					0	0	0			REV__ENSG00000101680|ENST00000389658|LAMA1	REV__ENSG00000101680|ENST00000389658|LAMA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2608642578125	2	449.261259	896.507966	-0.43537	-0.0001956	-1.0183	-0.0004575	-1.4537	-0.00065309	449.26067669224085	66.168	1.0089	66.554	66.153	67.162	0.38581					54	26	3	0	0	0	0.85277	1	7251	7251		25.45	1.2474	1	1011600	+		39927	17296	26573	26585	45496	45496					0.05557204617332445
PALKQVSAPRF	11	Unmodified	_PALKQVSAPRF_					0	0	0		ENST00000498542.5_1_22:24105328-24106389:+|nuORF;ENST00000477921.1_1_22:24105340-24106628:+|nuORF	ENST00000498542.5_1_22:24105328-24106389:+|nuORF	ENST00000498542.5_1_22:24105328-24106389:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.24151611328125	3	405.239907	1212.69789	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.33	1	103.6	103.1	104.1	0.26524								0	0	0	0.56276	1	12607	12607		34.087	3.5176	1				39928	12366	26574	26586	45497	45497					0.10005071559703538
PALKRHPG	8	Unmodified	_PALKRHPG_					0	0	0		ENST00000427076.5_1_7:44027725-44054350:-|nuORF;ENST00000422304.1_1_7:44027725-44058742:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2628173828125	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.884	1	2888	2888		33.516	0	1	3384400			39929	11478	26575	26587	45498	45498					0.07144347919654592
PALKRHPG	8	Unmodified	_PALKRHPG_					0	0	0		ENST00000427076.5_1_7:44027725-44054350:-|nuORF;ENST00000422304.1_1_7:44027725-44058742:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2615661621094	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.86791	1	2776	2776		28.254	0	1	3673500			39930	11478	26575	26587	45499	45499					0.07144347919654592
PALKRHPG	8	Unmodified	_PALKRHPG_					0	0	0		ENST00000427076.5_1_7:44027725-44054350:-|nuORF;ENST00000422304.1_1_7:44027725-44058742:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2619323730469	2	438.264136	874.51372	-1.0936	-0.00047928	-0.34853	-0.00015275	-1.4421	-0.00063203	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.81548	2	2915	2877;2915		26.796	7.4361	1	2862500			39931	11478	26575	26587	45500;45501	45501					0.07144347919654592
PALKRHPG	8	Unmodified	_PALKRHPG_					0	0	0		ENST00000427076.5_1_7:44027725-44054350:-|nuORF;ENST00000422304.1_1_7:44027725-44058742:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.261962890625	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.85277	1	3372	3372		25.45	0	1	4268300			39932	11478	26575	26587	45502	45502					0.07144347919654592
PALKRHPG	8	Unmodified	_PALKRHPG_					0	0	0		ENST00000427076.5_1_7:44027725-44054350:-|nuORF;ENST00000422304.1_1_7:44027725-44058742:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2629699707031	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.88915	1	2523	2523		35.201	1.0282	1	22924000			39933	11478	26575	26587	45503	45503					0.07144347919654592
PALKRHPG	8	Unmodified	_PALKRHPG_					0	0	0		ENST00000427076.5_1_7:44027725-44054350:-|nuORF;ENST00000422304.1_1_7:44027725-44058742:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.262939453125	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.80706	4	2830	2505;2776;2820;2830		35.201	6.9464	1	22029000			39934	11478	26575	26587	45504;45505;45506;45507	45507					0.07144347919654592
PALKRHPG	8	Unmodified	_PALKRHPG_					0	0	0		ENST00000427076.5_1_7:44027725-44054350:-|nuORF;ENST00000422304.1_1_7:44027725-44058742:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	ENST00000427076.5_1_7:44027725-44054350:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713928222656	2	438.264136	874.51372	1.122	0.00049175	-1.8793	-0.00082365	-0.7573	-0.0003319	438.26341678256296	36.941	1.6371	37.427	37.038	38.675	0.48581					73	40	4	0	0	0	0.4196	1	2947	2947		37.028	0	1	1189400			39935	11478	26575	26587	45508	45508					0.07144347919654592
PALKVVKK	8	Unmodified	_PALKVVKK_					0	0	0		nc|ENSG00000132394|P57772-2|EEFSEC;ENSG00000132394|ENST00000254730|EEFSEC	nc|ENSG00000132394|P57772-2|EEFSEC	nc|ENSG00000132394|P57772-2|EEFSEC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.2973937988281	2	441.810388	881.606223	0.92696	0.00040954	-0.20001	-8.8369E-05	0.72695	0.00032117	441.80865180563364	19.712	0.86346	19.783	19.324	20.187	0.071127					52	31	2	0	0	0	0.4196	1	412	412		21.702	6.0661	1	16943			39936	3792	26576	26588	45509	45509					0.1606843293318434
PALKVVKK	8	Unmodified	_PALKVVKK_					0	0	0		nc|ENSG00000132394|P57772-2|EEFSEC;ENSG00000132394|ENST00000254730|EEFSEC	nc|ENSG00000132394|P57772-2|EEFSEC	nc|ENSG00000132394|P57772-2|EEFSEC	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	441.810388	881.606223	-2.1646	-0.00095635	3.368	0.001488	1.2033	0.00053164	441.810201917468	19.637	1.1988	19.637	18.954	20.153	0	-0.15037	0.0018778	NaN	21.702	75	49	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44962			39937	3792	26576	26588							0.1606843293318434
PALKVVKK	8	Unmodified	_PALKVVKK_					0	0	0		nc|ENSG00000132394|P57772-2|EEFSEC;ENSG00000132394|ENST00000254730|EEFSEC	nc|ENSG00000132394|P57772-2|EEFSEC	nc|ENSG00000132394|P57772-2|EEFSEC	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	441.810388	881.606223	1.5604	0.00068939	-0.13293	-5.8729E-05	1.4275	0.00063067	441.8085853396325	20.013	0.55053	19.943	19.632	20.183	-0.070013	0.15507	-0.0012157	NaN	21.702	40	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14998			39938	3792	26576	26588							0.1606843293318434
PALLCRKK	8	Unmodified	_PALLCRKK_					0	0	0			REV__ENSG00000204272|ENST00000374922|NBDY	REV__ENSG00000204272|ENST00000374922|NBDY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.79095458984375	2	464.791672	927.568792	0.17035	7.9177E-05	-2.224	-0.0010337	-2.0536	-0.00095451	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.81548	1	1755	1755		20.482	5.8177	1	283920	+		39939	23476	26577	26589	45510	45510					0.10211018395921201
PALLGFGRGT	10	Unmodified	_PALLGFGRGT_					0	0	0		ENST00000374024.3_1_1:27721873-27722296:+|nuORF	ENST00000374024.3_1_1:27721873-27722296:+|nuORF	ENST00000374024.3_1_1:27721873-27722296:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.77996826171875	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.86218	1	8273	8273		32.812	4.9302	1	385180			39940	10764	26578	26590	45511	45511					0.05589180025708629
PALLGLAKTE	10	Unmodified	_PALLGLAKTE_					0	0	0			REV__ENSG00000070601|ENST00000377765|FRMPD1	REV__ENSG00000070601|ENST00000377765|FRMPD1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8050842285156	2	506.8055	1011.59645	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.456	1	36.738	36.238	37.238	0.28173								0	0	0	0.45132	1	2861	2861		23.042	2.0956	1		+		39941	16605	26579	26591	45512	45512					0.09111200137135711
PALLLASY	8	Unmodified	_PALLLASY_					0	0	0		ENST00000564574.5_2_16:28493646-28503072:-|nuORF;nc|ENSG00000261832|Q13286-4|CLN3;ENST00000566083.6_2_16:28493835-28503080:-|nuORF;nc|ENSG00000261832|Q13286-7|CLN3;nc|ENSG00000261832|Q13286-3|CLN3;ENSG00000188603|ENST00000636147|CLN3	ENST00000564574.5_2_16:28493646-28503072:-|nuORF	ENST00000564574.5_2_16:28493646-28503072:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.2502746582031	2	424.249829	846.485105	4.6708	0.0019816	-3.7108	-0.0015743	0.95999	0.00040727	424.2483274707268	107.02	1.3116	107.17	106.66	107.97	0.14929					169	50	5	0	0	0	0.87807	1	13094	13094		31.579	3.3246	1	20368000			39942	7940	26580	26592	45513	45513					0.05572185499852367
PALLQSVPPKT	11	Unmodified	_PALLQSVPPKT_					0	0	0		ENSG00000109851|ENST00000524983|DBX1	ENSG00000109851|ENST00000524983|DBX1	ENSG00000109851|ENST00000524983|DBX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8428344726562	2	575.845156	1149.67576	-0.99796	-0.00057467	-2.8602	-0.001647	-3.8582	-0.0022217	575.8433464319414	90.672	2.8412	90.741	88.754	91.595	0.069328					215	67	4	0	0	0	0.7434	1	9187	9187		23.523	2.5758	1	1885000			39943	2488	26581	26593	45514	45514					0.10690847091268552
PALLVPSAKRR	11	Unmodified	_PALLVPSAKRR_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2469787597656	3	403.259302	1206.75608	-0.18598	-7.4998E-05	-1.3574	-0.00054738	-1.5434	-0.00062238	403.25974017885744	104.69	0.49074	104.67	104.41	104.9	-0.014809					19	11	2	0	0	0	0.17385	1	11308	11308		8.4073	0	1	51138			39944	7421	26582	26594	45515	45515					0.16096753204965353
PALPARGLAF	10	Unmodified	_PALPARGLAF_					0	0	0			REV__ENSG00000142235|ENST00000600059|LMTK3	REV__ENSG00000142235|ENST00000600059|LMTK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80126953125	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.86589	1	3324	3324		29.15	4.9468	1	412810	+		39945	19733	26583	26595	45516	45516					0.08122056922411502
PALPAVVSA	9	Unmodified	_PALPAVVSA_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7461853027344	2	412.747453	823.480354	-1.81	-0.00074707	-1.0377	-0.00042831	-2.8477	-0.0011754	412.74693613939564	84.91	2.7925	85.06	84.234	87.026	0.14951					114	64	4	0	0	0	0.7932	1	8232	8232		25.45	0	1	976210	+		39946	22567	26584	26596	45517	45517					0.06155301357091503
PALPKRHG	8	Unmodified	_PALPKRHG_					0	0	0			REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2631530761719	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.86791	1	2976	2976		28.254	3.7351	1	3384400	+		39947	24929	26585	26597	45518	45518					0.07144347919654592
PALPKRHG	8	Unmodified	_PALPKRHG_					0	0	0			REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26373291015625	2	438.264136	874.51372	-0.25936	-0.00011367	-1.4504	-0.00063564	-1.7097	-0.00074931	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.86288	1	2748	2748		26.796	4.8362	1	2361100	+		39948	24929	26585	26597	45519	45519					0.07144347919654592
PALPKRHG	8	Unmodified	_PALPKRHG_					0	0	0			REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26300048828125	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.82464	2	3333	3333;3732		26.796	3.7536	1	4268300	+		39949	24929	26585	26597	45520;45521	45520					0.07144347919654592
PALPKRHG	8	Unmodified	_PALPKRHG_					0	0	0			REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2635803222656	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.88915	1	2928	2928		35.201	14.719	1	22924000	+		39950	24929	26585	26597	45522	45522					0.07144347919654592
PALPKRHG	8	Unmodified	_PALPKRHG_					0	0	0			REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26318359375	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.82464	1	2891	2891		21.702	0	1	22029000	+		39951	24929	26585	26597	45523	45523					0.07144347919654592
PALPKRHG	8	Unmodified	_PALPKRHG_					0	0	0			REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26324462890625	2	438.264136	874.51372	0.037237	1.632E-05	-1.83	-0.00080201	-1.7927	-0.00078569	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.81548	1	2100	2100		20.482	0.48506	1	10667000	+		39952	24929	26585	26597	45524	45524					0.07144347919654592
PALPKRHG	8	Unmodified	_PALPKRHG_					0	0	0			REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26202392578125	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.88915	1	2914	2914		35.201	8.4046	1	21381000	+		39953	24929	26585	26597	45525	45525					0.07144347919654592
PALPKRHG	8	Unmodified	_PALPKRHG_					0	0	0			REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2625427246094	2	438.264136	874.51372	0.27759	0.00012166	-2.5692	-0.001126	-2.2916	-0.0010043	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.82464	1	2845	2845		21.702	4.2343	1	85249000	+		39954	24929	26585	26597	45526	45526					0.07144347919654592
PALPKRHG	8	Unmodified	_PALPKRHG_					0	0	0			REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2622375488281	2	438.264136	874.51372	1.5783	0.00069171	-3.9402	-0.0017268	-2.3619	-0.0010351	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.82464	1	2834	2834		21.702	2.3424	1	92475000	+		39955	24929	26585	26597	45527	45527					0.07144347919654592
PALPKRHG	8	Unmodified	_PALPKRHG_					0	0	0			REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	REV__ENST00000313946.12_1_4:3945001-3949165:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2637023925781	2	438.264136	874.51372	-1.2747	-0.00055866	-2.1943	-0.00096169	-3.469	-0.0015203	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.81548	2	3845	3832;3845		28.254	0	1	219150000	+		39956	24929	26585	26597	45528;45529	45529					0.07144347919654592
PALPSRPLVP	10	Unmodified	_PALPSRPLVP_					0	0	0		ENST00000379499.3_1_X:21675905-21676427:-|nuORF	ENST00000379499.3_1_X:21675905-21676427:-|nuORF	ENST00000379499.3_1_X:21675905-21676427:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.3232421875	2	523.821484	1045.62842	2.2043	0.0011546	-2.748	-0.0014395	-0.54371	-0.00028481	523.8194039189141	102.01	1.2471	102.27	101.66	102.91	0.26322					67	31	3	0	0	0	0.64457	1	12449	12449		47.657	5.2612	1	351080			39957	10894	26586	26598	45530	45530					0.10742612610920332
PALPSRPLVP	10	Unmodified	_PALPSRPLVP_					0	0	0		ENST00000379499.3_1_X:21675905-21676427:-|nuORF	ENST00000379499.3_1_X:21675905-21676427:-|nuORF	ENST00000379499.3_1_X:21675905-21676427:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	523.821484	1045.62842	0.82631	0.00043284	-2.9132	-0.001526	-2.0869	-0.0010931	524.3212197894915	102.33	0.43317	102.47	102.3	102.73	0.13523	0.031681	0.0016906	NaN	47.657	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65397			39958	10894	26586	26598							0.10742612610920332
PALQDALH	8	Unmodified	_PALQDALH_					0	0	0		ENSG00000126464|ENST00000418929|PRR12	ENSG00000126464|ENST00000418929|PRR12	ENSG00000126464|ENST00000418929|PRR12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.24615478515625	2	432.732335	863.450116	2.3997	0.0010384	-3.3986	-0.0014707	-0.99887	-0.00043224	432.73080596812173	98.056	1.3577	98.104	97.621	98.979	0.048157					48	30	2	0	0	0	0.4196	1	10430	10430		42.474	0	1	66113			39959	3455	26587	26599	45531	45531					0.01292942691884491
PALSLRGILTL	11	Unmodified	_PALSLRGILTL_					0	0	0		ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	ENSG00000197977|ENST00000354666|ELOVL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3663940429688	2	577.368798	1152.72304	-0.31736	-0.00018324	-3.4769	-0.0020075	-3.7943	-0.0021907	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.70737	1	10474	10474		30.318	1.1477	1	6617600			39960	8220	26588	26600	45532	45532					0.1527912636227029
PALSRKQRTVL	11	Unmodified	_PALSRKQRTVL_					0	0	0		nc|ENSG00000250067|A6XGL0-2|YJEFN3;ENST00000458210.7_1_19:19645671-19648330:+|nuORF;ENSG00000250067|ENST00000514277|YJEFN3	nc|ENSG00000250067|A6XGL0-2|YJEFN3	nc|ENSG00000250067|A6XGL0-2|YJEFN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5976257324219	3	423.598094	1267.77245	2.8995	0.0012282	-3.9608	-0.0016778	-1.0614	-0.0004496	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.7342	1	11611	11611		17.167	0.63689	1	6928400			39961	8843	26589	26601	45533	45533					0.14927834371087556
PALTQHLTII	10	Unmodified	_PALTQHLTII_					0	0	0		ENST00000482108.1_2_7:94295726-94295804:+|nuORF	ENST00000482108.1_2_7:94295726-94295804:+|nuORF	ENST00000482108.1_2_7:94295726-94295804:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.829833984375	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.73395	1	8921	8921		42.864	3.6114	1	2008100			39962	12479	26590	26602	45534	45534					0.10094577919812764
PALVFGRL	8	Unmodified	_PALVFGRL_					0	0	0			REV__ENSG00000155760|ENST00000286201|FZD7;REV__ENSG00000180340|ENST00000315323|FZD2	REV__ENSG00000180340|ENST00000315323|FZD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.77386474609375	2	436.771263	871.527973	1.4261	0.00062287	3.9463	0.0017236	5.3724	0.0023465	436.7729940973578	27.77	1.2677	27.515	27.282	28.55	-0.25465					51	30	3	0	0	0	0.81548	1	1631	1631		20.482	0	1	1148800	+		39963	20444;22391	26591	26603	45535	45535					0.08707000347953908
PALVLLIVWLL	11	Unmodified	_PALVLLIVWLL_					0	0	0			REV__nc|ENSG00000143297|Q96RD9-3|FCRL5	REV__nc|ENSG00000143297|Q96RD9-3|FCRL5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2811279296875	3	417.280932	1248.82097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.381	1	69.51	69.01	70.01	0.1291								0	0	0	0.56276	1	6278	6278		20.837	2.3061	1		+		39964	19787	26592	26604	45536	45536					0.20650934958280232
PALVRALTQRN	11	Unmodified	_PALVRALTQRN_					0	0	0			REV__ENST00000492877.1_1_1:28210997-28211207:+|nuORF	REV__ENST00000492877.1_1_1:28210997-28211207:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8690185546875	2	619.870028	1237.7255	-1.2246	-0.00075908	0.04402	2.7286E-05	-1.1806	-0.0007318	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.72106	1	9510	9510		28.081	3.5623	1	3118800	+		39965	27681	26593	26605	45537	45537					0.11614974819917734
PALWLPRSH	9	Unmodified	_PALWLPRSH_					0	0	0		ENSG00000237988|ENST00000641137|OR2I1P;nc|ENSG00000237988|Q8NGU4|OR2I1P	ENSG00000237988|ENST00000641137|OR2I1P	ENSG00000237988|ENST00000641137|OR2I1P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8067016601562	2	538.803626	1075.5927	2.2674	0.0012217	3.4223	0.001844	5.6897	0.0030656	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.7932	1	9524	9524		25.45	1.2474	1	835060			39966	8763	26594	26606	45538	45538					0.05792575153964208
PAMADENIIVR	11	Unmodified	_PAMADENIIVR_					0	0	0		ENST00000510895.6_1_5:70898342-70931145:+|nuORF;ENSG00000131844|ENST00000340941|MCCC2	ENST00000510895.6_1_5:70898342-70931145:+|nuORF	ENST00000510895.6_1_5:70898342-70931145:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	614.8223266601562	2	614.821355	1227.62816	0.73075	0.00044928	2.7268	0.0016765	3.4575	0.0021258	614.823129297079	16.607	0.18688	16.685	16.564	16.751	0.07715					8	5	2	0	0	0	0.74022	1	120	120		14.865	0	1	44056			39967	3752	26595	26607	45539	45539					0.02344824828765013
PAMGKTALFY	10	Unmodified	_PAMGKTALFY_					0	0	0		nc|ENSG00000162849|Q2KJY2-2|KIF26B;chr1:245511128-245540767|14|19.0|0.13|7.16|+|ENST00000366518|KIF26B,KIF26B;ENSG00000162849|ENST00000407071|KIF26B	nc|ENSG00000162849|Q2KJY2-2|KIF26B	nc|ENSG00000162849|Q2KJY2-2|KIF26B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.779541015625	2	549.786253	1097.55795	-0.20071	-0.00011035	-2.8733	-0.0015797	-3.074	-0.0016901	549.7845258751091	76.539	0.44742	77.107	76.768	77.215	0.56836					17	13	2	0	0	0	0.82886	1	8725	8725		37.812	2.1932	1	190010			39968	46	26596	26608	45540	45540					0.013075712309500886
PAMKAKGLE	9	Unmodified	_PAMKAKGLE_					0	0	0		nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;ENSG00000100280|ENST00000357586|AP1B1;ENST00000472057.1_1_22:29727525-29736761:-|nuORF	nc|ENSG00000100280|Q10567-3|AP1B1	nc|ENSG00000100280|Q10567-3|AP1B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7670593261719	2	472.76532	943.516088	0.74188	0.00035074	3.3813	0.0015986	4.1232	0.0019493	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.7932	1	8750	8750		20.947	0.4651	1	547170			39969	1817	26597	26609	45541	45541					0.04207015542442605
PAMSLCSH	8	Unmodified	_PAMSLCSH_					0	0	0			REV__ENST00000489573.5_1_3:160117521-160118495:+|nuORF	REV__ENST00000489573.5_1_3:160117521-160118495:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.1888122558594	2	423.185849	844.357144	1.9896	0.00084198	0.5574	0.00023589	2.547	0.0010779	423.18580453435493	101.5	0.3704	101.78	101.69	102.06	0.28752					14	9	2	0	0	0	0.4196	1	12318	12318		35.201	8.4046	1	156270	+		39970	27620	26598	26610	45542	45542					-0.07126021357350965
PAMVKKKA	8	Unmodified	_PAMVKKKA_					0	0	0			REV__nc|ENSG00000118900|Q9NPG3-2|UBN1	REV__nc|ENSG00000118900|Q9NPG3-2|UBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.77410888671875	2	436.772948	871.531344	0.064831	2.8317E-05	1.7526	0.00076551	1.8175	0.00079382	436.77360082478805	26.186	0.49975	26.291	25.975	26.474	0.1054					37	22	2	0	0	0	0.83058	1	988	988		12.959	0.75233	1	131610	+		39971	18331	26599	26611	45543	45543					0.0904392713028983
PAMVKKKA	8	Unmodified	_PAMVKKKA_					0	0	0			REV__nc|ENSG00000118900|Q9NPG3-2|UBN1	REV__nc|ENSG00000118900|Q9NPG3-2|UBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.7736511230469	2	436.772948	871.531344	-0.76279	-0.00033317	2.3111	0.0010094	1.5483	0.00067627	436.773961366412	27.779	2.36	27.682	26.915	29.275	-0.096947					107	54	4	0	0	0	0.82419	1	1648	1648		13.775	0.81615	1	1192900	+		39972	18331	26599	26611	45544	45544					0.0904392713028983
PANHPPLAK	9	Unmodified	_PANHPPLAK_					0	0	0		ENST00000481082.1_1_1:157512505-157514867:-|nuORF	ENST00000481082.1_1_1:157512505-157514867:-|nuORF	ENST00000481082.1_1_1:157512505-157514867:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7670593261719	2	472.769252	943.52395	-1.1355	-0.00053681	-3.1204	-0.0014752	-4.2559	-0.002012	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.74721	1	7856	7856		37.159	3.6435	1	292450			39973	12452	26600	26612	45545	45545					0.04992910854230104
PANLFAEW	8	Unmodified	_PANLFAEW_					0	0	0			REV__ENSG00000102241|ENST00000218364|HTATSF1	REV__ENSG00000102241|ENST00000218364|HTATSF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2341003417969	2	474.23471	946.454868	-0.78771	-0.00037356	0.39061	0.00018524	-0.3971	-0.00018832	474.23486716056846	19.889	1.8268	19.259	18.666	20.493	-0.62961					53	41	2	0	0	0	0.86288	1	581	581		26.796	0	1	102420	+		39974	17332	26601	26613	45546	45546					-0.020501731653439492
PANPIPVIKN	10	Unmodified	_PANPIPVIKN_					0	0	0		ENSG00000090060|ENST00000216277|PAPOLA;ENST00000555508.1_1_14:97029095-97031384:+|nuORF	ENSG00000090060|ENST00000216277|PAPOLA	ENSG00000090060|ENST00000216277|PAPOLA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8167724609375	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.86589	1	9119	9119		29.15	4.9468	1	4208000			39975	1638	26602	26614	45547	45547					0.09498308748334239
PANPIPVIKN	10	Unmodified	_PANPIPVIKN_					0	0	0		ENSG00000090060|ENST00000216277|PAPOLA;ENST00000555508.1_1_14:97029095-97031384:+|nuORF	ENSG00000090060|ENST00000216277|PAPOLA	ENSG00000090060|ENST00000216277|PAPOLA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8170776367188	2	531.818941	1061.62333	-0.032225	-1.7138E-05	-3.6245	-0.0019276	-3.6567	-0.0019447	531.8169096298473	101.36	0.9939	101.39	101.01	102	0.031036					45	23	3	0	0	0	0.85694	1	10817	10817		21.96	1.013	1	591860			39976	1638	26602	26614	45548	45548					0.09498308748334239
PANSKRPN	8	Unmodified	_PANSKRPN_					0	0	0		ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2407531738281	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.91977	1	8131	8131		45.952	5.1738	1	1068200			39977	7607	26603	26615	45549	45549					0.021228632976999506
PANSKRPN	8	Unmodified	_PANSKRPN_					0	0	0		ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2408142089844	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.87479	3	8127	8127;8277;8374		38.806	1.5408	1	1238700			39978	7607	26603	26615	45550;45551;45552	45550					0.021228632976999506
PANSKRPN	8	Unmodified	_PANSKRPN_					0	0	0		ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24072265625	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.89494	1	7828	7828		37.159	1.5408	1	1094000			39979	7607	26603	26615	45553	45553					0.021228632976999506
PAPAAGHTR	9	Unmodified	_PAPAAGHTR_					0	0	0			REV__ENSG00000197483|ENST00000598519|ZNF628	REV__ENSG00000197483|ENST00000598519|ZNF628	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2353515625	2	439.235576	876.456599	-0.81334	-0.00035725	1.0235	0.00044957	0.21018	9.2317E-05	439.2359205926715	27.517	1.1763	27.341	26.971	28.147	-0.17559					58	26	5	0	0	0	0.74721	1	1584	1584		37.159	0	1	693140	+		39980	23237	26604	26616	45554	45554					0.013428806432784768
PAPAPPPQT	9	Unmodified	_PAPAPPPQT_					0	0	0			REV__ENSG00000169710|ENST00000306749|FASN	REV__ENSG00000169710|ENST00000306749|FASN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.263427734375	2	438.23471	874.454868	0.28782	0.00012613	-1.3362	-0.00058556	-1.0484	-0.00045943	438.2345262824857	35.206	0.35035	35.453	35.203	35.554	0.24769					18	8	3	0	0	0	0.20789	1	2665	2665		37.159	6.6555	1	333960	+		39981	21595	26605	26617	45555	45555					0.012618268346614059
PAPAPPPQT	9	Unmodified	_PAPAPPPQT_					0	0	0			REV__ENSG00000169710|ENST00000306749|FASN	REV__ENSG00000169710|ENST00000306749|FASN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2626037597656	2	438.23471	874.454868	-1.2914	-0.00056595	-0.98944	-0.00043361	-2.2809	-0.00099956	438.23413721504437	40.997	0.2833	41.631	41.426	41.709	0.6339					12	7	2	0	0	0	0.20789	1	3553	3553		29.15	0	1	1212400	+		39982	21595	26605	26617	45556	45556					0.012618268346614059
PAPAPPPTK	9	Unmodified	_PAPAPPPTK_					0	0	0			REV__ENSG00000165632|ENST00000344293|TAF3	REV__ENSG00000165632|ENST00000344293|TAF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2628173828125	2	438.252903	874.491253	-2.5301	-0.0011088	-2.7125	-0.0011888	-5.2426	-0.0022976	438.2516401584229	41.427	0.62726	41.841	41.647	42.274	0.4139					18	16	2	0	0	0	0.20789	1	3601	3601		35.618	0	1	729440	+		39983	21198	26606	26618	45557	45557					0.04898703731373644
PAPEVPLKTV	10	Unmodified	_PAPEVPLKTV_					0	0	0		nc|ENSG00000110713|P52948-2|NUP98;ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948|NUP98	nc|ENSG00000110713|P52948-2|NUP98	nc|ENSG00000110713|P52948-2|NUP98	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7815551757812	2	525.813325	1049.6121	-0.85584	-0.00045001	2.0753	0.0010912	1.2194	0.0006412	525.8146627707877	47.334	0.47765	48.257	47.915	48.393	0.92315					23	11	3	0	0	0	0.37624	1	4537	4537		56.721	14.325	1	573810			39984	2536	26607	26619	45558	45558					0.08927486654192762
PAPFGAICLC	10	Unmodified	_PAPFGAICLC_					0	0	0			REV__ENST00000588173.1_1_19:13262893-13263325:+|nuORF	REV__ENST00000588173.1_1_19:13262893-13263325:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.2375183105469	2	496.240624	990.466695	-1.7892	-0.00088786	-3.1983	-0.0015871	-4.9875	-0.002475	496.2388858051541	30.95	0.59715	30.95	30.699	31.296	0					45	19	3	0	0	0	0.85976	1	1442	1442		35.201	1.2791	1	171020	+		39985	29137	26608	26620	45559	45559					-0.028920157380298406
PAPFKPITR	9	Unmodified	_PAPFKPITR_					0	0	0		ENSG00000166902|ENST00000300151|MRPL16	ENSG00000166902|ENST00000300151|MRPL16	ENSG00000166902|ENST00000300151|MRPL16	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8106079101562	2	513.808377	1025.6022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.674	1	54.674	54.174	55.174	0								0	0	0	0.28565	1	4603	4603		36.447	8.5645	1				39986	6245	26609	26621	45560	45560					0.0904234343945518
PAPGPLKH	8	Unmodified	_PAPGPLKH_					0	0	0		ENST00000310942.8_1_17:77759703-77759895:+|nuORF	ENST00000310942.8_1_17:77759703-77759895:+|nuORF	ENST00000310942.8_1_17:77759703-77759895:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7393493652344	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.82464	1	2006	2006		21.702	0	1	1448600			39987	9917	26610	26622	45561	45561					0.0502585427974509
PAPIGPPTK	9	Unmodified	_PAPIGPPTK_					0	0	0			REV__nc|ENSG00000144642|Q6XE24-3|RBMS3	REV__nc|ENSG00000144642|Q6XE24-3|RBMS3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2631530761719	2	439.260728	876.506903	-1.21	-0.00053151	2.9762	0.0013073	1.7662	0.00077581	439.2620188107711	38.745	0.22575	38.698	38.511	38.736	-0.047001					6	4	2	0	0	0	0.20789	1	2720	2720		23.042	2.0956	1	38456	+		39988	29907	26611	26623	45562	45562					0.06370990248410635
PAPIGPPTK	9	Unmodified	_PAPIGPPTK_					0	0	0			REV__nc|ENSG00000144642|Q6XE24-3|RBMS3	REV__nc|ENSG00000144642|Q6XE24-3|RBMS3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2625732421875	2	439.260728	876.506903	-1.5615	-0.00068591	-2.6096	-0.0011463	-4.1711	-0.0018322	439.2580674372869	37.6	0.13995	37.616	37.511	37.651	0.016567					5	3	2	0	0	0	0.20789	1	2161	2161		9.7057	3.393	1	22608	+		39989	29907	26611	26623	45563	45563					0.06370990248410635
PAPIGPPTK	9	Unmodified	_PAPIGPPTK_					0	0	0			REV__nc|ENSG00000144642|Q6XE24-3|RBMS3	REV__nc|ENSG00000144642|Q6XE24-3|RBMS3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.26287841796875	2	439.260728	876.506903	-1.5069	-0.00066191	1.5593	0.00068496	0.052473	2.3049E-05	439.2612986029237	42.093	0.99572	42.791	42.344	43.339	0.69754					56	24	3	0	0	0	0.20789	1	3686	3686		24.203	5.8783	1	2615100	+		39990	29907	26611	26623	45564	45564					0.06370990248410635
PAPIGPPTK	9	Unmodified	_PAPIGPPTK_					0	0	0			REV__nc|ENSG00000144642|Q6XE24-3|RBMS3	REV__nc|ENSG00000144642|Q6XE24-3|RBMS3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	439.260728	876.506903	-0.42808	-0.00018804	0.3577	0.00015713	-0.070371	-3.0911E-05	439.25994845941443	38.504	0.25132	39.026	38.911	39.162	0.52235	0.16328	-3.0055E-06	NaN	23.042	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31525	+		39991	29907	26611	26623							0.06370990248410635
PAPKIKIKEP	10	Unmodified	_PAPKIKIKEP_					0	0	0			REV__nc|ENSG00000011007|Q14241-1|ELOA	REV__nc|ENSG00000011007|Q14241-1|ELOA	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3402709960938	2	560.858067	1119.70158	-0.40606	-0.00022774	4.0716	0.0022836	3.6656	0.0020559	560.8602586838109	102.57	0.35876	102.57	102.43	102.79	0					10	8	2	0	0	0	0.37624	1	10507	10507		9.7057	0	1	305410	+		39992	29673	26612	26624	45565	45565					0.14651741333545942
PAPLALRASR	10	Unmodified	_PAPLALRASR_					0	0	0		ENST00000440181.5_1_4:38637635-38666157:-|nuORF	ENST00000440181.5_1_4:38637635-38666157:-|nuORF	ENST00000440181.5_1_4:38637635-38666157:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3217163085938	2	526.322183	1050.62981	0.50775	0.00026724	4.2307	0.0022267	4.7385	0.002494	526.3242724010648	65.302	0.68651	65.427	64.942	65.628	0.12532					49	33	2	0	0	0	0.86718	1	5767	5767		27.882	1.1893	1	180270			39993	11770	26613	26625	45566	45566					0.10652246699669377
PAPLALRASR	10	Unmodified	_PAPLALRASR_					0	0	0		ENST00000440181.5_1_4:38637635-38666157:-|nuORF	ENST00000440181.5_1_4:38637635-38666157:-|nuORF	ENST00000440181.5_1_4:38637635-38666157:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	526.322183	1050.62981	-0.040056	-2.1082E-05	4.2169	0.0022194	4.1768	0.0021983	526.3244237062573	65.436	0.39079	65.44	65.212	65.602	0.0046997	0.021504	3.3783E-05	NaN	27.882	26	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108080			39994	11770	26613	26625							0.10652246699669377
PAPLALRASR	10	Unmodified	_PAPLALRASR_					0	0	0		ENST00000440181.5_1_4:38637635-38666157:-|nuORF	ENST00000440181.5_1_4:38637635-38666157:-|nuORF	ENST00000440181.5_1_4:38637635-38666157:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	526.322183	1050.62981	0.14606	7.6875E-05	4.0639	0.0021389	4.2099	0.0022158	526.3244073750385	65.424	0.23952	65.389	65.156	65.396	-0.034798	-0.030092	-0.00012724	NaN	27.882	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72365			39995	11770	26613	26625							0.10652246699669377
PAPLHGKR	8	Unmodified	_PAPLHGKR_					0	0	0			REV__ENSG00000164080|ENST00000684192|RAD54L2	REV__ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26318359375	2	438.264136	874.51372	0.23628	0.00010355	-2.5171	-0.0011032	-2.2808	-0.00099961	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.82464	1	3191	3191		21.702	4.3374	1	5350400	+		39996	21027	26614	26626	45567	45567					0.07144347919654592
PAPLHGKR	8	Unmodified	_PAPLHGKR_					0	0	0			REV__ENSG00000164080|ENST00000684192|RAD54L2	REV__ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2624206542969	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.86791	1	3011	3011		28.254	1.4582	1	22924000	+		39997	21027	26614	26626	45568	45568					0.07144347919654592
PAPLLVLL	8	Unmodified	_PAPLLVLL_					0	0	0		ENST00000572067.1_1_16:67919557-67919770:+|nuORF;ENST00000576147.1_2_16:67919557-67920159:+|nuORF	ENST00000572067.1_1_16:67919557-67919770:+|nuORF	ENST00000572067.1_1_16:67919557-67919770:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.29827880859375	2	418.286214	834.557876	-0.026156	-1.0941E-05	-2.4681	-0.0010324	-2.4942	-0.0010433	418.2850398955792	52.79	1.449	53.404	52.703	54.152	0.61436					49	34	2	0	0	0	0.4196	1	5347	5347		16.705	0	1	136260			39998	14008	26615	26627	45569	45569					0.13397939293281524
PAPLPALPV	9	Unmodified	_PAPLPALPV_					0	0	0		ENSG00000126562|ENST00000246914|WNK4;nc|ENSG00000126562|Q96J92-3|WNK4;nc|ENSG00000126562|Q96J92-2|WNK4	ENSG00000126562|ENST00000246914|WNK4	ENSG00000126562|ENST00000246914|WNK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7681884765625	2	437.773471	873.53239	-1.5161	-0.00066369	-3.9886	-0.0017461	-5.5047	-0.0024098	437.77165455530013	42.195	1.723	42.892	42.344	44.067	0.69754					85	42	3	0	0	0	0.7932	1	3771	3771		21.702	0	1	1268100			39999	3457	26616	26628	45570	45570					0.09056464770833372
PAPLPGPTQ	9	Unmodified	_PAPLPGPTQ_					0	0	0			REV__nc|ENSG00000118007|Q8WVM7-2|STAG1	REV__nc|ENSG00000118007|Q8WVM7-2|STAG1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26336669921875	2	439.242535	876.470518	-0.015971	-7.0152E-06	0.86441	0.00037969	0.84844	0.00037267	439.24286570193107	37.412	0.65164	37.388	37.126	37.778	-0.023979					18	14	2	0	0	0	0.20789	1	2451	2451		23.042	0	1	33326	+		40000	18289	26617	26629	45571	45571					0.027341133517211347
PAPLPKVPG	9	Unmodified	_PAPLPKVPG_					0	0	0		ENST00000371100.8_1_20:57427796-57428033:+|nuORF	ENST00000371100.8_1_20:57427796-57428033:+|nuORF	ENST00000371100.8_1_20:57427796-57428033:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2638244628906	2	438.271096	874.527639	1.7291	0.0007578	1.7101	0.00074949	3.4392	0.0015073	438.27177460661153	36.051	0.28216	36.492	36.333	36.615	0.44043					10	6	2	0	0	0	0.20789	1	2809	2809		25.45	21.465	1	1069900			40001	10659	26618	26630	45572	45572					0.0853558062809725
PAPLPPLNG	9	Unmodified	_PAPLPPLNG_					0	0	0		ENST00000381348.4_2_22:42354086-42354425:+|nuORF	ENST00000381348.4_2_22:42354086-42354425:+|nuORF	ENST00000381348.4_2_22:42354086-42354425:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2615051269531	2	438.252903	874.491253	-2.625	-0.0011504	-3.6779	-0.0016118	-6.3029	-0.0027623	438.2513542232152	41.114	0.45957	41.506	41.165	41.625	0.39209					20	12	3	0	0	0	0.20789	1	3517	3517		50.025	14.406	1	2769500			40002	10955	26619	26631	45573	45573					0.048987037313850124
PAPLPPLNG	9	Unmodified	_PAPLPPLNG_					0	0	0		ENST00000381348.4_2_22:42354086-42354425:+|nuORF	ENST00000381348.4_2_22:42354086-42354425:+|nuORF	ENST00000381348.4_2_22:42354086-42354425:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.26348876953125	2	438.252903	874.491253	-1.5691	-0.00068764	2.2573	0.00098928	0.68828	0.00030164	438.25384179132413	42.562	0.45431	43.259	43.052	43.506	0.69754					17	10	2	0	0	0	0.20789	1	3832	3832		40.573	0	1	263760			40003	10955	26619	26631	45574	45574					0.048987037313850124
PAPMVRYC	8	Unmodified	_PAPMVRYC_					0	0	0		ENSG00000115274|ENST00000233331|INO80B	ENSG00000115274|ENST00000233331|INO80B	ENSG00000115274|ENST00000233331|INO80B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7231140136719	2	468.725141	935.435729	-0.030537	-1.4313E-05	-4.1586	-0.0019492	-4.1891	-0.0019635	468.7232524752806	86.757	0.90463	87.203	86.694	87.599	0.44628					66	21	4	0	0	0	0.87276	2	10150	10150;10172		29.842	1.5873	1	4360600			40004	2829	26620	26632	45575;45576	45575					-0.034571690522511744
PAPPALGNWP	10	Unmodified	_PAPPALGNWP_					0	0	0			REV__nc|ENSG00000197283|Q96PV0-3|SYNGAP1	REV__nc|ENSG00000197283|Q96PV0-3|SYNGAP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2718200683594	2	510.269084	1018.52362	1.1719	0.00059797	-2.4042	-0.0012268	-1.2323	-0.00062881	510.2679156941934	57.329	0.36119	57.884	57.642	58.003	0.55512					12	8	2	0	0	0	0.37624	1	5941	5941		38.806	25.847	1	186890	+		40005	23216	26621	26633	45577	45577					0.015094911343794593
PAPPCFDE	8	Unmodified	_PAPPCFDE_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4;REV__ENSG00000214929|ENST00000344803|SPATA31D1	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.1839904785156	2	438.183829	874.353105	-0.10157	-4.4508E-05	2.9346	0.0012859	2.8331	0.0012414	438.1851006184844	34.485	0.56187	34.48	34.295	34.857	-0.0047417					20	13	2	0	0	0	0.86791	1	2080	2080		28.254	2.8041	1	28365	+		40006	22878;23668	26622	26634	45578	45578					-0.08909787579409567
PAPPLPRLSA	10	Unmodified	_PAPPLPRLSA_					0	0	0			REV__ENST00000610085.1_1_7:148395177-148395648:-|nuORF	REV__ENST00000610085.1_1_7:148395177-148395648:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.803466796875	2	509.805834	1017.59712	-0.93407	-0.00047619	-3.0736	-0.0015669	-4.0077	-0.0020431	509.8042014095356	84.682	2.4835	84.682	83.134	85.618	0					128	59	3	0	0	0	0.86348	1	7969	7969		31.53	1.6883	1	609880	+		40007	29424	26623	26635	45579	45579					0.08902039576832976
PAPPPGKMA	9	Unmodified	_PAPPPGKMA_					0	0	0		ENST00000443155.5_1_5:170288887-170338173:+|nuORF	ENST00000443155.5_1_5:170288887-170338173:+|nuORF	ENST00000443155.5_1_5:170288887-170338173:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.2557067871094	2	433.233656	864.452759	-1.5615	-0.00067651	-1.8782	-0.00081369	-3.4397	-0.0014902	433.2330983742779	106.97	0.34349	107.11	106.86	107.2	0.13866					10	8	2	0	0	0	0.20789	1	11466	11466		40.573	13.777	1	458700			40008	11801	26624	26636	45580	45580					0.015110748252027406
PAPPPSQL	8	Unmodified	_PAPPPSQL_					0	0	0		nc|ENSG00000257923|P39880-5|CUX1;nc|ENSG00000257923|P39880-2|CUX1;ENSG00000257923|ENST00000292535|CUX1;nc|ENSG00000257923|P39880-3|CUX1	nc|ENSG00000257923|P39880-5|CUX1	nc|ENSG00000257923|P39880-5|CUX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.72393798828125	2	403.723978	805.433404	-1.8572	-0.00074981	2.1457	0.00086627	0.28846	0.00011646	403.7247227583041	64.772	1.8283	64.897	63.712	65.54	0.12545					133	73	3	0	0	0	0.9295	1	5716	5716		55.504	2.1528	1	1035700			40009	8909	26625	26637	45581	45581					0.022904418059511045
PAPPPVGPPTE	11	Unmodified	_PAPPPVGPPTE_					0	0	0		ENST00000433059.1_2_19:36282594-36282750:-|nuORF	ENST00000433059.1_2_19:36282594-36282750:-|nuORF	ENST00000433059.1_2_19:36282594-36282750:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.781005859375	2	529.779482	1057.54441	-0.36911	-0.00019554	3.5969	0.0019056	3.2278	0.00171	529.7811640199199	55.532	0.95031	55.495	55.207	56.157	-0.036827					76	33	3	0	0	0	0.72918	1	4666	4666		26.693	3.1702	1	498070			40010	11678	26626	26638	45582	45582					0.017940367233677534
PAPPQIDNGII	11	Unmodified	_PAPPQIDNGII_					0	0	0		ENST00000465534.5_1_1:207500166-207510288:+|nuORF;nc|ENSG00000196352|P08174-4|CD55;ENSG00000196352|ENST00000367064|CD55;nc|ENSG00000196352|P08174-3|CD55;ENST00000488171.5_1_1:207495110-207510876:+|nuORF;nc|ENSG00000196352|P08174-5|CD55;nc|ENSG00000196352|P08174-2|CD55;nc|ENSG00000196352|P08174-6|CD55;nc|ENSG00000196352|P08174-7|CD55	ENST00000465534.5_1_1:207500166-207510288:+|nuORF	ENST00000465534.5_1_1:207500166-207510288:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3300170898438	2	567.811313	1133.60807	-1.1919	-0.0006768	-2.0607	-0.0011701	-3.2527	-0.0018469	567.8100725008525	93.979	0.76624	94.048	93.624	94.39	0.069595					27	17	2	0	0	0	0.1728	1	9777	9777		24.519	1.4767	1	90857			40011	8041	26627	26639	45583	45583					0.04661397160475644
PAPQLLSS	8	Unmodified	_PAPQLLSS_					0	0	0		ENST00000341329.7_1_2:227860472-227860832:+|nuORF	ENST00000341329.7_1_2:227860472-227860832:+|nuORF	ENST00000341329.7_1_2:227860472-227860832:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7292175292969	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.89494	1	7493	7493		37.159	1.5408	1	159770			40012	10246	26628	26640	45584	45584					0.03070424460383947
PAPQRPLT	8	Unmodified	_PAPQRPLT_					0	0	0		nc|ENSG00000161847|Q8IY67|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2560119628906	2	440.255977	878.497401	-1.1281	-0.00049663	-0.16476	-7.2535E-05	-1.2928	-0.00056917	440.2557479543984	62.714	1.4312	63.102	62.273	63.704	0.3878					74	32	3	0	0	0	0.85277	1	6780	6780		25.45	1.2474	1	707290			40013	15042	26629	26641	45585	45585					0.053292219628815474
PAPSGTQLEGH	11	Unmodified	_PAPSGTQLEGH_					0	0	0			REV__ENST00000454190.6_2_3:9944576-9944681:+|nuORF	REV__ENST00000454190.6_2_3:9944576-9944681:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.7674560546875	2	547.26727	1092.51999	0.43083	0.00023578	-1.3979	-0.00076501	-0.96705	-0.00052923	547.2663369111906	27.918	0.58229	27.879	27.673	28.255	-0.038523					21	12	3	0	0	0	0.61369	1	1378	1378		42.864	14.982	1	28929	+		40014	26921	26630	26642	45586	45586					-0.022572234301378558
PAPSGTQLEGH	11	Unmodified	_PAPSGTQLEGH_					0	0	0			REV__ENST00000454190.6_2_3:9944576-9944681:+|nuORF	REV__ENST00000454190.6_2_3:9944576-9944681:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	547.26727	1092.51999	0.68478	0.00037476	-0.85612	-0.00046853	-0.17134	-9.3768E-05	547.266551832267	27.658	0.30858	27.686	27.569	27.878	0.02817	-0.29834	-0.0010579	NaN	42.864	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48793	+		40015	26921	26630	26642							-0.022572234301378558
PAPSGTQLEGH	11	Unmodified	_PAPSGTQLEGH_					0	0	0			REV__ENST00000454190.6_2_3:9944576-9944681:+|nuORF	REV__ENST00000454190.6_2_3:9944576-9944681:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	547.26727	1092.51999	-1.3527	-0.00074029	1.1218	0.00061395	-0.23085	-0.00012634	547.2676123230067	28.267	0.52786	28.17	27.885	28.413	-0.096947	0.18543	0.001107	NaN	42.864	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108980	+		40016	26921	26630	26642							-0.022572234301378558
PAPSGTQLEGH	11	Unmodified	_PAPSGTQLEGH_					0	0	0			REV__ENST00000454190.6_2_3:9944576-9944681:+|nuORF	REV__ENST00000454190.6_2_3:9944576-9944681:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	547.26727	1092.51999	0.79375	0.00043439	-0.81357	-0.00044524	-0.019822	-1.0848E-05	547.2664409101887	28.437	0.46504	28.264	27.934	28.399	-0.17336	0.27966	-0.0010113	NaN	42.864	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102380	+		40017	26921	26630	26642							-0.022572234301378558
PAPSPKIGRAR	11	Unmodified	_PAPSPKIGRAR_					0	0	0			REV__ENST00000546603.5_1_12:39047686-39073432:-|nuORF	REV__ENST00000546603.5_1_12:39047686-39073432:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.3455810546875	2	575.346189	1148.67783	1.1925	0.00068607	-1.8408	-0.0010591	-0.64836	-0.00037303	575.3450411705345	98.393	1.0962	98.77	98.327	99.423	0.37678					95	26	5	0	0	0	0.72739	1	11956	11956		27.047	0.3544	1	3337700	+		40018	19516	26631	26643	45587	45587					0.10943320619730912
PAPTGLILL	9	Unmodified	_PAPTGLILL_					0	0	0		ENST00000417536.5_1_22:38046171-38052013:+|nuORF	ENST00000417536.5_1_22:38046171-38052013:+|nuORF	ENST00000417536.5_1_22:38046171-38052013:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.78759765625	2	447.786579	893.558604	-1.4062	-0.00062966	4.3321	0.0019399	2.926	0.0013102	447.7883827410388	38.825	1.0154	39.167	38.856	39.872	0.34187					59	23	4	0	0	0	0.7932	2	3244	3244;3256		20.482	2.8868	1	988770			40019	11413	26632	26644	45588;45589	45588					0.1075673394233263
PAPTKEAHL	9	Unmodified	_PAPTKEAHL_					0	0	0			REV__ENST00000533263.1_2_11:57282631-57283146:-|nuORF	REV__ENST00000533263.1_2_11:57282631-57283146:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.26422119140625	2	482.266542	962.51853	0.52825	0.00025476	-0.040449	-1.9507E-05	0.4878	0.00023525	482.2662373845772	49.818	0.8652	50.266	50.02	50.885	0.44761					42	20	3	0	0	0	0.19953	1	4887	4887		73.975	2.679	1	568050	+		40020	28339	26633	26645	45590	45590					0.03577187271753246
PAPTTTPPAPA	11	Unmodified	_PAPTTTPPAPA_					0	0	0		ENSG00000133800|ENST00000256178|LYVE1	ENSG00000133800|ENST00000256178|LYVE1	ENSG00000133800|ENST00000256178|LYVE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.7718200683594	2	510.771657	1019.52876	-0.47769	-0.00024399	0.58907	0.00030088	0.11139	5.6892E-05	510.7717753358817	71.723	0.70918	71.684	71.344	72.053	-0.039001					46	26	2	0	0	0	0.73893	1	6976	6976		24.519	0.015177	1	248170			40021	3893	26634	26646	45591	45591					0.01977750206322071
PAPVKLIL	8	Unmodified	_PAPVKLIL_					0	0	0		nc|ENSG00000155158|Q5VTQ0-5|TTC39B;nc|ENSG00000155158|Q5VTQ0-2|TTC39B;nc|ENSG00000155158|Q5VTQ0-6|TTC39B;ENSG00000155158|ENST00000512701|TTC39B;nc|ENSG00000155158|Q5VTQ0-3|TTC39B;nc|ENSG00000155158|Q5VTQ0|TTC39B;nc|ENSG00000155158|Q5VTQ0-7|TTC39B;ENST00000380853.1_1_9:15172019-15185442:-|nuORF;nc|ENSG00000155158|Q5VTQ0-4|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.77471923828125	2	425.791664	849.568775	-0.11247	-4.789E-05	3.1474	0.0013401	3.0349	0.0012922	425.794581225239	38.881	0.12331	38.828	38.746	38.87	-0.052731					5	3	2	0	0	0	0.4196	1	2330	2330		14.664	5.1935	1	31636			40022	5314	26635	26647	45592	45592					0.13797341667577712
PAPVTRLP	8	Unmodified	_PAPVTRLP_					0	0	0			REV__ENST00000557444.5_1_16:90065685-90066530:+|nuORF	REV__ENST00000557444.5_1_16:90065685-90066530:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747802734375	2	425.760895	849.507237	0.30332	0.00012914	-0.90383	-0.00038481	-0.60051	-0.00025567	425.7600612077455	37.725	0.37153	38.038	37.903	38.274	0.31312					11	9	2	0	0	0	0.4196	1	3049	3049		25.45	0	1	337280	+		40023	26937	26636	26648	45593	45593					0.07646409968276657
PAQSELDASQG	11	Unmodified	_PAQSELDASQG_					0	0	0			REV__ENSG00000124134|ENST00000537075|KCNS1	REV__ENSG00000124134|ENST00000537075|KCNS1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	551.7584838867188	2	551.754192	1101.49383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.787	1	66.787	66.287	67.287	0								0	0	0	0.56276	1	5891	5891		37.508	10.815	1		+		40024	18560	26637	26649	45594	45594					-0.052855373922966464
PAQSVEAELL	10	Unmodified	_PAQSVEAELL_					0	0	0		ENST00000588504.5_1_17:43344609-43344696:+|nuORF;ENST00000590100.5_1_17:43344609-43345382:+|nuORF	ENST00000588504.5_1_17:43344609-43344696:+|nuORF	ENST00000588504.5_1_17:43344609-43344696:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7843017578125	2	528.782222	1055.54989	2.0369	0.0010771	1.7341	0.00091696	3.7711	0.0019941	528.7830016729833	97.738	1.3991	98.123	97.681	99.08	0.38548					98	33	4	0	0	0	0.80179	1	11743	11743		39.253	1.4413	1	3308400			40025	14213	26638	26650	45595	45595					0.024337155151897605
PAQVIFIR	8	Unmodified	_PAQVIFIR_					0	0	0			REV__nc|ENSG00000176261|Q8IWT0-2|ZBTB8OS	REV__nc|ENSG00000176261|Q8IWT0-2|ZBTB8OS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.287353515625	2	472.28982	942.565087	-1.7052	-0.00080534	-2.46	-0.0011618	-4.1652	-0.0019672	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.8347	1	12670	12670		23.042	4.7181	1	3080300	+		40026	30051	26639	26651	45596	45596					0.09150671893689832
PARFTARG	8	Unmodified	_PARFTARG_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26336669921875	2	438.245944	874.477334	0.042333	1.8552E-05	3.1299	0.0013717	3.1722	0.0013902	438.2456882322391	35.84	0.45066	35.78	35.564	36.015	-0.060337					15	11	2	0	0	0	0.4196	1	1930	1930		45.972	14.017	1	80291			40027	8446	26640	26652	45597	45597					0.035074710229423545
PARKAGPL	8	Unmodified	_PARKAGPL_					0	0	0			REV__nc|ENSG00000143502|Q5VX71-4|SUSD4	REV__nc|ENSG00000143502|Q5VX71-4|SUSD4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.1763000488281	2	405.253237	808.491922	0.7966	0.00032282	-4.1795	-0.0016938	-3.3829	-0.0013709	405.2498888119796	96.825	0.41392	97.216	96.989	97.403	0.39065					10	9	2	0	0	0	0.4196	1	11641	11641		12.959	0	1	46558	+		40028	29902	26641	26653	45598	45598					0.08001543171087633
PARPLPPAPP	10	Unmodified	_PARPLPPAPP_					0	0	0			REV__ENST00000483620.1_1_3:50402422-50403202:-|nuORF	REV__ENST00000483620.1_1_3:50402422-50403202:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8011779785156	2	506.800552	1011.58655	-0.28255	-0.0001432	1.9422	0.00098432	1.6597	0.00084112	506.80140373255165	50.862	1.8071	50.77	50.35	52.158	-0.091797					82	54	2	0	0	0	0.86452	1	3989	3989		30.504	5.0535	1	131380	+		40029	27494	26642	26654	45599	45599					0.08122056922400134
PARPPAKP	8	Unmodified	_PARPPAKP_					0	0	0		ENSG00000272636|ENST00000613549|DOC2B	ENSG00000272636|ENST00000613549|DOC2B	ENSG00000272636|ENST00000613549|DOC2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25347900390625	2	417.253237	832.491922	-1.8958	-0.00079101	1.4773	0.0006164	-0.41848	-0.00017461	417.2537348130364	35.472	1.6692	35.503	35.168	36.838	0.031132					80	49	2	0	0	0	0.81724	1	1904	1904		14.664	0	1	197380			40030	8984	26643	26655	45600	45600					0.06897543171078269
PARRLLDLY	9	Unmodified	_PARRLLDLY_					0	0	0		nc|ENSG00000162576|Q9BRK3-2|MXRA8;ENSG00000162576|ENST00000309212|MXRA8;nc|ENSG00000162576|Q9BRK3-3|MXRA8	nc|ENSG00000162576|Q9BRK3-2|MXRA8;ENSG00000162576|ENST00000309212|MXRA8	nc|ENSG00000162576|Q9BRK3-2|MXRA8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.8270263671875	2	558.82984	1115.64513	0.050658	2.8309E-05	-4.1328	-0.0023095	-4.0822	-0.0022812	558.827346664337	65.575	0.73492	65.54	65.252	65.986	-0.034798					94	39	3	0	0	0	0.7932	1	6299	6299		23.042	2.0956	1	4755700			40031	15045;5698	26644	26656	45601	45601					0.09193113496917249
PARSKCSCPA	10	Unmodified	_PARSKCSCPA_					0	0	0		ENST00000528694.1_1_11:829540-829996:+|nuORF	ENST00000528694.1_1_11:829540-829996:+|nuORF	ENST00000528694.1_1_11:829540-829996:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.2386169433594	2	510.241686	1018.46882	0.23064	0.00011768	-3.791	-0.0019343	-3.5604	-0.0018166	510.239723435425	36.252	0.62169	36.355	36.054	36.676	0.10306					31	20	2	0	0	0	0.60985	1	1983	1983		49.536	5.4192	1	106270			40032	13308	26645	26657	45602	45602					-0.03967587000204276
PARSKGRRWHR	11	Unmodified	_PARSKGRRWHR_					0	0	0		ENST00000429947.1_1_2:242824154-242824229:+|nuORF	ENST00000429947.1_1_2:242824154-242824229:+|nuORF	ENST00000429947.1_1_2:242824154-242824229:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.9341735839844	3	469.604465	1405.79157	-1.0886	-0.0005112	3.1035	0.0014574	2.0149	0.0009462	469.60579012279544	24.348	0.75488	24.406	24.014	24.769	0.058167					57	34	2	0	0	0	0.73647	1	820	820		25.068	1.6899	1	67749			40033	11618	26646	26658	45603	45603					0.10490228505341292
PASAKPVERRK	11	Unmodified	_PASAKPVERRK_					0	0	0		nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;ENSG00000183091|ENST00000397345|NEB	nc|ENSG00000183091|P20929-4|NEB	nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8690185546875	2	619.870028	1237.7255	-0.30632	-0.00018988	-0.95589	-0.00059253	-1.2622	-0.00078241	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.68532	1	9862	9862		33.922	1.9668	1	2103100			40034	7501	26647	26659	45604	45604					0.11614974819917734
PASFAIRLN	9	Unmodified	_PASFAIRLN_					0	0	0		nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-9|FLNB;ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-8|FLNB;ENST00000475487.1_1_3:58141790-58149086:+|nuORF;ENST00000481470.5_1_3:58118395-58154450:+|nuORF	nc|ENSG00000136068|O75369-7|FLNB	nc|ENSG00000136068|O75369-7|FLNB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7797546386719	2	494.782359	987.550165	-1.0037	-0.00049663	-3.3955	-0.00168	-4.3992	-0.0021767	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.77244	1	8547	8547		32.812	6.1195	1	265620			40035	4084	26648	26660	45605	45605					0.0558918002569726
PASQSPQGA	9	Unmodified	_PASQSPQGA_					0	0	0		ENST00000494993.1_1_15:91475325-91475739:-|nuORF	ENST00000494993.1_1_15:91475325-91475739:-|nuORF	ENST00000494993.1_1_15:91475325-91475739:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.7017517089844	2	421.703774	841.392996	0.25404	0.00010713	-2.4137	-0.0010179	-2.1597	-0.00091074	421.70258771233904	19.309	0.40166	18.68	18.49	18.892	-0.6296					12	8	2	0	0	0	0.73802	1	497	497		37.812	0.65241	1	64398			40036	12758	26649	26661	45606	45606					-0.034045245844708916
PASRGGDLLK	10	Unmodified	_PASRGGDLLK_					0	0	0		ENST00000256996.8_1_11:47260447-47260567:+|nuORF	ENST00000256996.8_1_11:47260447-47260567:+|nuORF	ENST00000256996.8_1_11:47260447-47260567:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.290283203125	2	507.290548	1012.56654	1.1757	0.00059642	-1.1317	-0.00057408	0.044036	2.2339E-05	507.28974541507256	29.9	0.82313	29.81	29.575	30.398	-0.089544					35	18	3	0	0	0	0.76096	1	1936	1936		41.427	0.64845	1	490380			40037	9346	26650	26662	45607	45607					0.06076261191810772
PASRTASTG	9	Unmodified	_PASRTASTG_					0	0	0		nc|ENSG00000168004|Q96KN8-2|PLAAT5;ENSG00000168004|ENST00000540857|PLAAT5;nc|ENSG00000168004|Q96KN8|PLAAT5	nc|ENSG00000168004|Q96KN8-2|PLAAT5	nc|ENSG00000168004|Q96KN8-2|PLAAT5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.218505859375	2	424.217049	846.419545	2.6374	0.0011188	0.78313	0.00033222	3.4205	0.001451	424.21733183456104	101.6	1.8618	101.55	100.84	102.7	-0.049828					92	44	4	0	0	0	0.76764	1	11104	11104		34.173	2.2177	1	2292700			40038	6354	26651	26663	45608	45608					-0.009808356931330309
PASSALELI	9	Unmodified	_PASSALELI_					0	0	0			REV__ENST00000575231.1_1_16:67963850-67964919:-|nuORF	REV__ENST00000575231.1_1_16:67963850-67964919:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7545471191406	2	450.755475	899.496398	0.58167	0.00026219	-3.5127	-0.0015834	-2.9311	-0.0013212	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.77546	1	7795	7795		31.955	0	1	285810	+		40039	28983	26652	26664	45609	45609					0.0426296280331826
PASSQRELLLT	11	Unmodified	_PASSQRELLLT_					0	0	0		ENST00000265351.11_1_6:43543606-43543798:-|nuORF	ENST00000265351.11_1_6:43543606-43543798:-|nuORF	ENST00000265351.11_1_6:43543606-43543798:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5649108886719	3	405.562827	1213.66665	1.5319	0.00062128	3.2091	0.0013015	4.741	0.0019228	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.72106	1	5920	5920		25.068	7.901	1	245170			40040	9503	26653	26665	45610	45610					0.06836453734968018
PASTRASGG	9	Unmodified	_PASTRASGG_					0	0	0		ENSG00000228075|ENST00000585477|BOD1L2	ENSG00000228075|ENST00000585477|BOD1L2	ENSG00000228075|ENST00000585477|BOD1L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.2054138183594	2	402.203941	802.39333	2.2889	0.00092062	2.0428	0.00082162	4.3317	0.0017422	402.20469632638094	98.499	3.236	98.444	96.673	99.909	-0.054817					141	75	3	0	0	0	0.67345	2	10672	10660;10672		42.396	3.1433	1	1723900			40041	8721	26654	26666	45611;45612	45612					-0.015771048646229247
PASTTVIPGTP	11	Unmodified	_PASTTVIPGTP_					0	0	0		ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6;nc|ENSG00000186976|Q5THR3-4|EFCAB6;nc|ENSG00000186976|Q5THR3-3|EFCAB6	ENSG00000186976|ENST00000262726|EFCAB6	ENSG00000186976|ENST00000262726|EFCAB6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	520.6507568359375	2	520.784764	1039.55498	-0.18858	-9.8209E-05	-0.30378	-0.00015821	-0.49236	-0.00025641	521.2860782033556	108.56	0.1404	108.69	108.6	108.74	0.13026					4	2	2	0	0	0	0.17318	1	11685	11685		32.812	4.7309	1	190640			40042	7832	26655	26667	45613	45613					0.03678019377821329
PASTTVIPGTP	11	Unmodified	_PASTTVIPGTP_					0	0	0		ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6;nc|ENSG00000186976|Q5THR3-4|EFCAB6;nc|ENSG00000186976|Q5THR3-3|EFCAB6	ENSG00000186976|ENST00000262726|EFCAB6	ENSG00000186976|ENST00000262726|EFCAB6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	520.9840087890625	2	520.784764	1039.55498	-0.19096	-9.9448E-05	-0.63285	-0.00032958	-0.82381	-0.00042903	520.7843368812792	108.31	0.24926	108.44	108.3	108.55	0.13026					7	5	2	0	0	0	0.16822	1	11661	11661		52.937	24.855	1	764130			40043	7832	26655	26667	45614	45614					0.03678019377821329
PATAAAYSD	9	Unmodified	_PATAAAYSD_					0	0	0		nc|ENSG00000078328|Q9NWB1-3|RBFOX1;nc|ENSG00000078328|Q9NWB1-4|RBFOX1;nc|ENSG00000078328|Q9NWB1-5|RBFOX1;ENSG00000078328|ENST00000550418|RBFOX1;nc|ENSG00000078328|Q9NWB1-2|RBFOX1	nc|ENSG00000078328|Q9NWB1-3|RBFOX1	nc|ENSG00000078328|Q9NWB1-3|RBFOX1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.25543212890625	2	433.698158	865.381762	-0.16759	-7.2684E-05	0.5852	0.0002538	0.41761	0.00018112	433.69994135416124	107.37	0.27853	107.34	107.21	107.49	-0.034409					8	6	2	0	0	0	0.20789	1	11703	11703		44.117	0	1	59240			40044	1396	26656	26668	45615	45615					-0.056313466786264144
PATAFPAKVTT	11	Unmodified	_PATAFPAKVTT_					0	0	0			REV__nc|ENSG00000286135|A0A494C103|SPADH	REV__nc|ENSG00000286135|A0A494C103|SPADH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3060913085938	2	552.308406	1102.60226	-0.70613	-0.00039	-2.9091	-0.0016067	-3.6153	-0.0019967	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.51007	1	9744	9744		51.193	12.387	1	1609500	+		40045	30286	26657	26669	45616	45616					0.05506298648788288
PATEDTFR	8	Unmodified	_PATEDTFR_					0	0	0		nc|ENSG00000105662|Q6UUV9-2|CRTC1;ENSG00000105662|ENST00000321949|CRTC1	nc|ENSG00000105662|Q6UUV9-2|CRTC1	nc|ENSG00000105662|Q6UUV9-2|CRTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.7225036621094	2	468.724707	935.43486	-1.0822	-0.00050726	-1.9959	-0.00093555	-3.0782	-0.0014428	468.7236147293877	70.106	0.76979	70.177	69.93	70.7	0.071037					66	37	3	0	0	0	0.89494	1	6362	6362		37.159	5.2042	1	1251800			40046	2235	26658	26670	45617	45617					-0.03543968895951366
PATGRRPRVP	10	Unmodified	_PATGRRPRVP_					0	0	0			REV__ENSG00000205089|ENST00000378731|CCNI2	REV__ENSG00000205089|ENST00000378731|CCNI2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8298950195312	2	553.830706	1105.64686	1.7761	0.00098364	-2.9855	-0.0016535	-1.2094	-0.00066981	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.86218	1	9302	9302		32.812	6.1195	1	1628400	+		40047	23539	26659	26671	45618	45618					0.09826167305504896
PATGRRPRVP	10	Unmodified	_PATGRRPRVP_					0	0	0			REV__ENSG00000205089|ENST00000378731|CCNI2	REV__ENSG00000205089|ENST00000378731|CCNI2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.830810546875	2	553.830706	1105.64686	2.0416	0.0011307	-3.0404	-0.0016839	-0.99881	-0.00055317	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.86718	1	9659	9659		27.882	5.3026	1	5457600	+		40048	23539	26659	26671	45619	45619					0.09826167305504896
PATGRRPRVP	10	Unmodified	_PATGRRPRVP_					0	0	0			REV__ENSG00000205089|ENST00000378731|CCNI2	REV__ENSG00000205089|ENST00000378731|CCNI2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8296508789062	2	553.830706	1105.64686	-1.4375	-0.00079614	0.20667	0.00011446	-1.2308	-0.00068168	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.86348	1	8717	8717		31.53	2.3598	1	1728300	+		40049	23539	26659	26671	45620	45620					0.09826167305504896
PATGTCRCGPG	11	Unmodified	_PATGTCRCGPG_					0	0	0		nc|ENSG00000162591|O75095-2|MEGF6;ENSG00000162591|ENST00000356575|MEGF6	nc|ENSG00000162591|O75095-2|MEGF6	nc|ENSG00000162591|O75095-2|MEGF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.222900390625	2	510.223494	1018.43243	-0.58544	-0.00029871	-0.45189	-0.00023056	-1.0373	-0.00052927	510.22321540791023	88.543	1.4016	89.014	88.32	89.721	0.47068					100	34	5	0	0	0	0.68532	1	10465	10465		33.922	0.42865	1	3237400			40050	5699	26660	26672	45621	45621					-0.07604463896905145
PATPLKLD	8	Unmodified	_PATPLKLD_					0	0	0		nc|ENSG00000184507|Q86Y26|NUTM1;nc|ENSG00000184507|Q86Y26-3|NUTM1;ENSG00000184507|ENST00000537011|NUTM1	nc|ENSG00000184507|Q86Y26|NUTM1	nc|ENSG00000184507|Q86Y26|NUTM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.3027038574219	2	427.752736	853.490919	0.4711	0.00020151	1.8701	0.00079992	2.3412	0.0010014	427.7544141076127	71.582	0.30956	71.712	71.591	71.901	0.13009					20	13	2	0	0	0	0.4196	1	6520	6520		26.796	1.3459	1	26227			40051	7618	26661	26673	45622	45622					0.058312840115036124
PATRRRRPRP	10	Unmodified	_PATRRRRPRP_					0	0	0		nc|ENSG00000070047|Q9P1Y6-2|PHRF1	nc|ENSG00000070047|Q9P1Y6-2|PHRF1	nc|ENSG00000070047|Q9P1Y6-2|PHRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.9281921386719	3	421.593678	1261.7592	2.8321	0.001194	-0.54575	-0.00023009	2.2863	0.0009639	421.59334720689543	16.004	0.20915	15.92	15.824	16.033	-0.083364					17	8	3	0	0	0	0.86802	1	104	104		27.047	2.8155	1	86123			40052	14772	26662	26674	45623	45623					0.13879441102358214
PAVCCQDP	8	Unmodified	_PAVCCQDP_					0	0	0		nc|ENSG00000004660|Q8N5S9-2|CAMKK1;ENST00000573483.1_1_17:3785816-3788993:-|nuORF;ENSG00000004660|ENST00000348335|CAMKK1	nc|ENSG00000004660|Q8N5S9-2|CAMKK1	nc|ENSG00000004660|Q8N5S9-2|CAMKK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.6699523925781	2	416.670031	831.32551	1.9395	0.00080815	-2.4803	-0.0010335	-0.54073	-0.00022531	416.6691699371926	94.865	1.1525	95.297	94.89	96.042	0.4324					58	27	4	0	0	0	0.884	1	11341	11341		33.516	1.5607	1	906750			40053	14730	26663	26675	45624	45624					-0.09690014111299661
PAVCRVKIP	9	Unmodified	_PAVCRVKIP_					0	0	0		ENSG00000145715|ENST00000274376|RASA1;nc|ENSG00000145715|P20936-3|RASA1	ENSG00000145715|ENST00000274376|RASA1	ENSG00000145715|ENST00000274376|RASA1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79608154296875	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.408	1	58.442	57.942	58.942	0.033905								0	0	0	0.31472	1	5357	5357		25.45	0	1				40054	4785	26664	26676	45625	45625					0.08783001050335315
PAVLALALLL	10	Unmodified	_PAVLALALLL_					0	0	0			REV__ENSG00000180044|ENST00000326474|C3orf80	REV__ENSG00000180044|ENST00000326474|C3orf80	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.3364562988281	2	497.338978	992.663404	-0.33878	-0.00016849	-2.9288	-0.0014566	-3.2676	-0.0016251	497.33721513240033	74.236	0.87539	74.192	73.986	74.862	-0.043877					46	30	2	0	0	0	0.85976	1	7342	7342		35.201	0	1	88485	+		40055	22376	26665	26677	45626	45626					0.16677855418890886
PAVLALALLL	10	Unmodified	_PAVLALALLL_					0	0	0			REV__ENSG00000180044|ENST00000326474|C3orf80	REV__ENSG00000180044|ENST00000326474|C3orf80	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	497.338978	992.663404	-1.4394	-0.00071586	-2.1653	-0.0010769	-3.6047	-0.0017928	497.33767929421293	74.158	0.66205	74.202	73.967	74.629	0.043648	0.0048581	0.00056644	NaN	35.201	44	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105970	+		40056	22376	26665	26677							0.16677855418890886
PAVLHCLS	8	Unmodified	_PAVLHCLS_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2276611328125	2	420.225831	838.437109	2.4843	0.001044	2.4469	0.0010283	4.9312	0.0020722	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.87276	1	7898	7898		29.842	3.0454	1	961790	+		40057	16404	26666	26678	45627	45627					0.011427883081410073
PAVLVQAGRG	10	Unmodified	_PAVLVQAGRG_					0	0	0		ENST00000394111.6_1_2:73143891-73161080:+|nuORF	ENST00000394111.6_1_2:73143891-73161080:+|nuORF	ENST00000394111.6_1_2:73143891-73161080:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.28753662109375	2	484.287808	966.561064	-0.090177	-4.3672E-05	1.8498	0.00089584	1.7596	0.00085217	484.2888489321722	94.628	1.0424	94.697	94.307	95.349	0.068336					40	24	2	0	0	0	0.85466	1	9889	9889		20.947	0.4651	1	302840			40058	11059	26667	26679	45628	45628					0.07644582399996125
PAVNCAAEH	9	Carbamidomethyl (C)	_PAVNC(Carbamidomethyl (C))AAEH_	PAVNC(1)AAEH		PAVNC(63)AAEH		0	1	0			REV__nc|ENSG00000125885|Q9UJA3-2|MCM8	REV__nc|ENSG00000125885|Q9UJA3-2|MCM8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.717529296875	2	484.716359	967.418164	1.0671	0.00051723	2.8185	0.0013662	3.8855	0.0018834	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.31972	1	11828	11828		63.306	20.91	1	7522200	+		40059	29825	26668	26680	45629	45629	357				-0.06684793053557314
PAVTLLGNIH	10	Unmodified	_PAVTLLGNIH_					0	0	0		nc|ENSG00000131373|Q9UJ83-3|HACL1;nc|ENSG00000131373|Q9UJ83-4|HACL1;nc|ENSG00000131373|Q9UJ83-2|HACL1;ENSG00000131373|ENST00000321169|HACL1	nc|ENSG00000131373|Q9UJ83-3|HACL1	nc|ENSG00000131373|Q9UJ83-3|HACL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.80224609375	2	517.803291	1033.59203	1.8454	0.00095555	-3.4835	-0.0018038	-1.6381	-0.00084821	517.8013948225781	96.741	1.9372	97.146	96.547	98.484	0.40498					84	46	2	0	0	0	0.37206	3	11600	11600;11611;11678		66.429	0	1	864970			40060	3724	26669	26681	45630;45631;45632	45630					0.07657735714224145
PAVTLLGNIH	10	Unmodified	_PAVTLLGNIH_					0	0	0		nc|ENSG00000131373|Q9UJ83-3|HACL1;nc|ENSG00000131373|Q9UJ83-4|HACL1;nc|ENSG00000131373|Q9UJ83-2|HACL1;ENSG00000131373|ENST00000321169|HACL1	nc|ENSG00000131373|Q9UJ83-3|HACL1	nc|ENSG00000131373|Q9UJ83-3|HACL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.8031005859375	2	517.803291	1033.59203	0.94966	0.00049174	-2.6	-0.0013463	-1.6503	-0.00085453	517.8018949597597	96.801	1.8943	97.192	96.61	98.504	0.39065					76	45	2	0	0	0	0.46422	3	11655	11655;11674;11686		58.782	8.9438	1	1026800			40061	3724	26669	26681	45633;45634;45635	45633					0.07657735714224145
PAVTLLGNIH	10	Unmodified	_PAVTLLGNIH_					0	0	0		nc|ENSG00000131373|Q9UJ83-3|HACL1;nc|ENSG00000131373|Q9UJ83-4|HACL1;nc|ENSG00000131373|Q9UJ83-2|HACL1;ENSG00000131373|ENST00000321169|HACL1	nc|ENSG00000131373|Q9UJ83-3|HACL1	nc|ENSG00000131373|Q9UJ83-3|HACL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	517.803291	1033.59203	-0.24169	-0.00012515	-2.2809	-0.001181	-2.5226	-0.0013062	517.8023446158915	96.771	0.84498	97.002	96.566	97.411	0.23103	-0.11107	0.00069678	NaN	66.429	25	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73677			40062	3724	26669	26681							0.07657735714224145
PAWALKPRL	9	Unmodified	_PAWALKPRL_					0	0	0		ENST00000445369.2_1_16:3062740-3063043:+|nuORF	ENST00000445369.2_1_16:3062740-3063043:+|nuORF	ENST00000445369.2_1_16:3062740-3063043:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3271484375	2	526.324194	1050.63383	0.48631	0.00025596	0.72465	0.0003814	1.211	0.00063736	526.3244623018427	62.826	0.99297	62.947	62.385	63.378	0.1209					77	46	2	0	0	0	0.7932	1	5495	5495		18.324	0	1	145820			40063	11822	26670	26682	45636	45636					0.110543361934333
PAWALKPRL	9	Unmodified	_PAWALKPRL_					0	0	0		ENST00000445369.2_1_16:3062740-3063043:+|nuORF	ENST00000445369.2_1_16:3062740-3063043:+|nuORF	ENST00000445369.2_1_16:3062740-3063043:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3251342773438	2	526.324194	1050.63383	-0.67072	-0.00035302	1.8472	0.00097224	1.1765	0.00061923	526.3250687277414	64.714	3.1276	64.752	62.47	65.598	0.037849					207	130	2	0	0	0	0.7932	1	5580	5580		24.203	4.8428	1	198930			40064	11822	26670	26682	45637	45637					0.110543361934333
PAWLIRNL	8	Unmodified	_PAWLIRNL_					0	0	0		nc|ENSG00000142794|Q9H094-3|NBPF3	nc|ENSG00000142794|Q9H094-3|NBPF3	nc|ENSG00000142794|Q9H094-3|NBPF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7956237792969	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.81548	1	4164	4164		20.482	2.1574	1	1111900			40065	14970	26671	26683	45638	45638					0.08446074267999393
PAWLIRNL	8	Unmodified	_PAWLIRNL_					0	0	0		nc|ENSG00000142794|Q9H094-3|NBPF3	nc|ENSG00000142794|Q9H094-3|NBPF3	nc|ENSG00000142794|Q9H094-3|NBPF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957763671875	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.86791	1	3636	3636		28.254	0.37203	1	1219600			40066	14970	26671	26683	45639	45639					0.08446074267999393
PAWLLFNLLL	10	Unmodified	_PAWLLFNLLL_					0	0	0			REV__ENSG00000158169|ENST00000289081|FANCC	REV__ENSG00000158169|ENST00000289081|FANCC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.580078125	3	400.577749	1198.71142	3.4037	0.0013634	3.6645	0.0014679	7.0682	0.0028314	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.84816	1	13560	13560		17.468	0.30126	1	5321000	+		40067	20594	26672	26684	45640	45640					0.12000929338955757
PAWLLGRLG	9	Unmodified	_PAWLLGRLG_					0	0	0			REV__ENST00000601887.1_1_19:58640838-58666346:-|nuORF	REV__ENST00000601887.1_1_19:58640838-58666346:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79583740234375	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.7932	1	4010	4010		19.36	0	1	1240000	+		40068	29325	26673	26685	45641	45641					0.08446074268010761
PAWLLRLRRRR	11	Unmodified	_PAWLLRLRRRR_					0	0	0			REV__ENST00000381340.7_1_12:26985723-26986077:-|nuORF	REV__ENST00000381340.7_1_12:26985723-26986077:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.32586669921875	3	498.319777	1491.9375	0.35108	0.00017495	4.3196	0.0021525	4.6706	0.0023275	498.32180738572106	50.996	1.0383	51.046	50.409	51.447	0.049896					72	32	3	0	0	0	0.81021	1	3960	3960		9.2118	0.41249	1	332530	+		40069	25963	26674	26686	45642	45642					0.21121111021375327
PAYVVPHR	8	Unmodified	_PAYVVPHR_					0	0	0		ENST00000255830.7_1_22:24210693-24224826:+|nuORF	ENST00000255830.7_1_22:24210693-24224826:+|nuORF	ENST00000255830.7_1_22:24210693-24224826:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7622375488281	2	469.763969	937.513385	-1.0651	-0.00050035	-4.3426	-0.00204	-5.4077	-0.0025403	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.89457	1	1910	1910		37.028	2.8559	1	219920			40070	9332	26675	26687	45643	45643					0.0421292819980863
PCAAEPSH	8	Unmodified	_PCAAEPSH_					0	0	0			REV__nc|ENSG00000116396|Q03721|KCNC4	REV__nc|ENSG00000116396|Q03721|KCNC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.17596435546875	2	406.173795	810.333038	2.4175	0.00098194	2.2498	0.00091382	4.6673	0.0018958	406.1750105746681	95.369	1.3884	95.789	94.967	96.355	0.42051					87	33	4	0	0	0	0.9159	1	11420	11420		44.531	0	1	1050400	+		40071	29794	26676	26688	45644	45644					-0.07971538519359456
PCAAEPSH	8	Unmodified	_PCAAEPSH_					0	0	0			REV__nc|ENSG00000116396|Q03721|KCNC4	REV__nc|ENSG00000116396|Q03721|KCNC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.1759948730469	2	406.173795	810.333038	2.6134	0.0010615	1.5172	0.00061625	4.1306	0.0016778	406.17470361655813	99.321	1.1441	99.683	99.176	100.32	0.36137					76	28	4	0	0	0	0.86288	2	11988	11988;12000		35.201	3.2459	1	2117600	+		40072	29794	26676	26688	45645;45646	45645					-0.07971538519359456
PCAGGGGP	8	Unmodified	_PCAGGGGP_					0	0	0		ENST00000468247.1_1_1:8716451-8763247:-|nuORF	ENST00000468247.1_1_1:8716451-8763247:-|nuORF	ENST00000468247.1_1_1:8716451-8763247:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	614.8246459960938	1	615.255522	614.248246	-0.50239	-0.0003091	-2.1306	-0.0013109	-2.633	-0.00162	615.2541432527953	71.078	1.2057	71.039	70.532	71.738	-0.039001					90	55	2	0	0	0	0.4196	1	6857	6857		10.185	0	1	144330			40073	12172	26677	26689	45647	45647					-0.0743086426531363
PCAPSDIH	8	Unmodified	_PCAPSDIH_					0	0	0			REV__ENST00000397985.6_1_18:61654936-61655104:+|nuORF	REV__ENST00000397985.6_1_18:61654936-61655104:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.1914367675781	2	420.189445	838.364338	1.7374	0.00073004	2.0855	0.00087629	3.8229	0.0016063	420.1905572526673	93.928	4.8779	94.369	91.96	96.838	0.44099					240	120	3	0	0	0	0.87276	4	11011	11011;11060;11072;11083		46.766	9.738	1	4179400	+		40074	26188	26678	26690	45648;45649;45650;45651	45648					-0.06130965485260731
PCCLLRHQGRL	11	Unmodified	_PCCLLRHQGRL_					0	0	0		ENST00000547105.1_1_12:62629005-62629191:-|nuORF	ENST00000547105.1_1_12:62629005-62629191:-|nuORF	ENST00000547105.1_1_12:62629005-62629191:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.8847961425781	3	432.565631	1294.67506	-0.34335	-0.00014852	0.79909	0.00034566	0.45574	0.00019714	432.9001495437514	32.632	0.45275	32.578	32.401	32.853	-0.05434					14	9	2	0	0	0	0.74022	1	1914	1914		24.232	3.1996	1	20403			40075	13598	26679	26691	45652	45652					0.03951405898919802
PCCVFRPV	8	Carbamidomethyl (C)	_PC(Carbamidomethyl (C))CVFRPV_	PC(0.98)C(0.02)VFRPV		PC(17)C(-17)VFRPV		0	1	0		ENST00000505991.1_1_4:25378960-25382068:+|nuORF;ENST00000315368.7_1_4:25378851-25382068:+|nuORF	ENST00000505991.1_1_4:25378960-25382068:+|nuORF	ENST00000505991.1_1_4:25378960-25382068:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.23614501953125	2	489.238415	976.462278	-0.71864	-0.00035159	-3.3907	-0.0016589	-4.1093	-0.0020104	489.2367667655941	86.159	1.8924	86.606	85.945	87.837	0.44736					116	45	5	0	0	0	0.92176	1	10152	10152		46.766	14.812	2	3138400			40076	9977	26680	26692	45653	45653	129				-0.026894801609159913
PCDVVPAPIL	10	Unmodified	_PCDVVPAPIL_					0	0	0			REV__ENST00000361786.6_1_14:77576167-77579814:+|nuORF	REV__ENST00000361786.6_1_14:77576167-77579814:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2816772460938	2	512.280803	1022.54705	-0.052062	-2.6671E-05	1.1419	0.00058499	1.0899	0.00055832	512.2812910993212	86.454	3.487	86.521	85.51	88.997	0.067436					149	81	2	0	0	0	0.86452	1	8777	8777		30.504	2.6214	1	329990	+		40077	25512	26681	26693	45654	45654					0.03668168856700049
PCGAKGLR	8	Unmodified	_PCGAKGLR_					0	0	0			REV__nc|ENSG00000168772|Q9H2H0|CXXC4	REV__nc|ENSG00000168772|Q9H2H0|CXXC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.22625732421875	2	401.223623	800.432692	1.843	0.00073947	-0.35496	-0.00014242	1.4881	0.00059705	401.22371577183856	35.687	0.22456	35.934	35.856	36.081	0.24769					7	5	2	0	0	0	0.4196	1	2747	2747		35.201	8.4046	1	110230	+		40078	21519	26682	26694	45655	45655					0.024493238852642207
PCGNANPH	8	Unmodified	_PCGNANPH_					0	0	0		ENSG00000221838|ENST00000359593|AP4M1	ENSG00000221838|ENST00000359593|AP4M1	ENSG00000221838|ENST00000359593|AP4M1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.2267150878906	2	405.171587	808.328621	-1.9257	-0.00078025	2.1678	0.00087831	0.24204	9.8067E-05	405.1723696393085	27.45	0.37371	27.518	27.288	27.661	0.068678					23	18	2	0	0	0	0.4196	1	1079	1079		13.775	0	1	34796			40079	8671	26683	26695	45656	45656					-0.08321002942273026
PCHRGALH	8	Unmodified	_PCHRGALH_					0	0	0		ENST00000319212.8_1_15:66624253-66624307:+|nuORF	ENST00000319212.8_1_15:66624253-66624307:+|nuORF	ENST00000319212.8_1_15:66624253-66624307:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.72503662109375	2	445.724321	889.434089	1.0481	0.00046718	-0.22681	-0.00010109	0.82132	0.00036608	445.7244055808773	100.53	0.92635	100.83	100.45	101.37	0.2999					53	22	4	0	0	0	0.89457	1	12174	12174		37.028	1.4102	1	1243200			40080	10016	26684	26696	45657	45657					-0.015050420259967723
PCITFPVQCV	10	Carbamidomethyl (C)	_PCITFPVQC(Carbamidomethyl (C))V_	PCITFPVQC(1)V		PC(-41)ITFPVQC(41)V		0	1	0			REV__ENST00000340434.4_1_9:72365698-72365776:-|nuORF	REV__ENST00000340434.4_1_9:72365698-72365776:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.2848510742188	2	582.28302	1162.55149	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.696	1	76.091	75.591	76.591	0.39507								0	0	0	0.45132	1	8569	8569		47.657	8.4045	2		+		40081	25244	26685	26697	45658	45658	308				-0.02328689992054933
PCKCPNKF	8	Unmodified	_PCKCPNKF_					0	0	0		ENSG00000148935|ENST00000454584|GAS2	ENSG00000148935|ENST00000454584|GAS2	ENSG00000148935|ENST00000454584|GAS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.7233581542969	2	468.725141	935.435729	-1.0178	-0.00047706	-3.0645	-0.0014364	-4.0823	-0.0019135	468.72367977500755	69.802	1.0969	69.938	69.737	70.834	0.13506					82	54	2	0	0	0	0.88915	1	6343	6343		35.201	6.0512	1	1482700			40082	4989	26686	26698	45659	45659					-0.034571690522511744
PCKRKKHVQK	10	Unmodified	_PCKRKKHVQK_					0	0	0			REV__nc|ENSG00000163159|Q15906-2|VPS72	REV__nc|ENSG00000163159|Q15906-2|VPS72	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.9225158691406	3	417.920403	1250.73938	2.7179	0.0011359	1.8029	0.00075346	4.5208	0.0018893	417.9211507262476	105.91	2.7799	105.88	105.06	107.84	-0.03714					241	65	4	0	0	0	0.86444	1	11747	11747		14.694	6.6593	1	23169000	+		40083	20887	26687	26699	45660	45660					0.12403929047354723
PCLASKKP	8	Unmodified	_PCLASKKP_					0	0	0			REV__ENST00000406875.7_1_7:139255655-139255937:-|nuORF	REV__ENST00000406875.7_1_7:139255655-139255937:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.7118835449219	2	422.241481	842.468409	0.52492	0.00022164	0.89271	0.00037694	1.4176	0.00059858	422.2420215026531	26.027	0.77176	25.77	25.218	25.99	-0.25721					23	17	2	0	0	0	0.4196	1	1352	1352		18.324	1.8513	1	85366	+		40084	26309	26688	26700	45661	45661					0.04087361342249096
PCLASLRIGRP	11	Unmodified	_PCLASLRIGRP_					0	0	0			REV__ENSG00000159256|ENST00000400485|MORC3	REV__ENSG00000159256|ENST00000400485|MORC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.8394165039062	2	591.842425	1181.6703	0.20248	0.00011984	-4.3438	-0.0025709	-4.1413	-0.002451	591.8398150448855	54.249	0.92471	54.656	54.235	55.16	0.40663					49	21	3	0	0	0	0.53361	1	5503	5503		49.536	6.6718	1	1205800	+		40085	20648	26689	26701	45662	45662					0.08672845027808762
PCLASLRIGRP	11	Unmodified	_PCLASLRIGRP_					0	0	0			REV__ENSG00000159256|ENST00000400485|MORC3	REV__ENSG00000159256|ENST00000400485|MORC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	591.8411254882812	2	591.842425	1181.6703	-0.40666	-0.00024068	-3.7149	-0.0021986	-4.1216	-0.0024393	591.8401589231509	54.069	0.87833	54.654	54.291	55.169	0.58474					54	20	4	0	0	0	0.32928	1	5493	5493		67.494	9.2637	1	1346000	+		40086	20648	26689	26701	45663	45663					0.08672845027808762
PCLHAGPPSP	10	Unmodified	_PCLHAGPPSP_					0	0	0			REV__ENST00000222248.3_1_19:17988859-17994831:+|nuORF	REV__ENST00000222248.3_1_19:17988859-17994831:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	488.2392883300781	2	488.23947	974.464386	0.33492	0.00016352	-1.9621	-0.00095798	-1.6272	-0.00079446	488.2383861954684	50.164	0.6455	50.206	49.888	50.534	0.042236					29	17	2	0	0	0	0.86452	1	3918	3918		30.504	5.0535	1	303370	+		40087	24160	26690	26702	45664	45664					-0.02386728151452644
PCLIDGVGKTG	11	Unmodified	_PCLIDGVGKTG_					0	0	0		L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|37|1|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|37|1|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|37|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2802124023438	2	530.278792	1058.54303	0.45501	0.00024128	2.625	0.001392	3.08	0.0016332	530.2806991102823	58.965	0.78107	59.079	58.607	59.388	0.11396					65	30	3	0	0	0	0.7144	1	5043	5043		29.17	2.374	1	246380			40088	14672	26691	26703	45665	45665					0.016100793629675536
PCLKLVDEKCA	11	Unmodified	_PCLKLVDEKCA_					0	0	0			REV__ENSG00000090863|ENST00000422840|GLG1	REV__ENSG00000090863|ENST00000422840|GLG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.8790588378906	3	406.878882	1217.61482	0.45884	0.00018669	0.39768	0.00016181	0.85652	0.0003485	406.87894631730694	18.36	0.46298	18.336	18.158	18.621	-0.024035					52	20	4	0	0	0	0.64964	1	319	319		38.714	1.1142	1	536680	+		40089	16998	26692	26704	45666	45666					0.014712507251715579
PCLLWKGE	8	Unmodified	_PCLLWKGE_					0	0	0		ENST00000568818.1_1_16:69964069-69965708:+|nuORF	ENST00000568818.1_1_16:69964069-69965708:+|nuORF	ENST00000568818.1_1_16:69964069-69965708:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.25701904296875	2	473.246763	944.478974	0.34188	0.00016179	2.4577	0.0011631	2.7996	0.0013249	473.24782054202086	28.883	1.4946	28.914	28.31	29.804	0.030945					99	51	4	0	0	0	0.90465	1	1375	1375		40.573	1.5511	1	514570			40090	13970	26693	26705	45667	45667					0.004513439966899568
PCMPTGSRPTG	11	Unmodified	_PCMPTGSRPTG_					0	0	0		ENST00000590275.1_1_19:33693878-33695988:+|nuORF;ENST00000590278.1_1_19:33695337-33695988:+|nuORF	ENST00000590275.1_1_19:33693878-33695988:+|nuORF	ENST00000590275.1_1_19:33693878-33695988:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.305908203125	2	552.252251	1102.48995	2.4204	0.0013367	0.7494	0.00041386	3.1698	0.0017505	552.2527572288419	94.15	0.85571	94.091	93.372	94.228	-0.059212					28	19	2	0	0	0	0.17502	1	9968	9968		36.447	0	1	50319			40091	14255	26694	26706	45668	45668					-0.05719621691332577
PCNQCEYCCIH	11	Unmodified	_PCNQCEYCCIH_					0	0	0			REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A	REV__nc|ENSG00000173612|Q5T6X5-2|GPRC6A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.58544921875	3	438.157433	1311.45047	-1.5932	-0.00069808	-3.7974	-0.0016639	-5.3906	-0.002362	438.49108487312645	31.946	0.091499	32.005	31.963	32.055	0.058315					5	3	2	0	0	0	0.17911	1	1479	1479		18.531	6.0982	1	24868	+		40092	21937	26695	26707	45669	45669					-0.19279833028735993
PCPARWEV	8	Unmodified	_PCPARWEV_					0	0	0		nc|ENSG00000160323|Q76LX8|ADAMTS13;nc|ENSG00000160323|Q76LX8-3|ADAMTS13;ENSG00000160323|ENST00000355699|ADAMTS13	nc|ENSG00000160323|Q76LX8|ADAMTS13	nc|ENSG00000160323|Q76LX8|ADAMTS13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.765380859375	2	479.234187	956.453822	-0.79806	-0.00038246	0.13351	6.3981E-05	-0.66456	-0.00031848	479.2334117041348	80.461	0.25555	80.987	80.78	81.035	0.52676					7	5	2	0	0	0	0.4196	1	9262	9262		20.482	0	1	39918			40093	15039	26696	26708	45670	45670					-0.026147108058808044
PCPLLAIL	8	Unmodified	_PCPLLAIL_					0	0	0		nc|ENSG00000128923|Q8NBR6-2|MINDY2;ENSG00000128923|ENST00000559228|MINDY2	nc|ENSG00000128923|Q8NBR6-2|MINDY2	nc|ENSG00000128923|Q8NBR6-2|MINDY2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.25836181640625	2	420.2566	838.498647	0.73393	0.00030844	-4.0031	-0.0016823	-3.2692	-0.0013739	420.25481034511705	112.22	0.2012	112.28	112.11	112.31	0.066025					10	6	2	0	0	0	0.80127	1	12092	12092		16.705	6.5202	1	81920			40094	3568	26697	26709	45671	45671					0.07293720007442062
PCPLLAIL	8	Unmodified	_PCPLLAIL_					0	0	0		nc|ENSG00000128923|Q8NBR6-2|MINDY2;ENSG00000128923|ENST00000559228|MINDY2	nc|ENSG00000128923|Q8NBR6-2|MINDY2	nc|ENSG00000128923|Q8NBR6-2|MINDY2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	420.2566	838.498647	2.541	0.0010679	-6.0031	-0.0025228	-3.4621	-0.001455	420.2539121581091	112.22	0.56364	112.25	112.11	112.68	0.030602	-0.015239	-0.00098219	NaN	16.705	29	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	437080			40095	3568	26697	26709							0.07293720007442062
PCPSPRGDH	9	Unmodified	_PCPSPRGDH_					0	0	0			REV__nc|ENSG00000160310|P55345-5|PRMT2	REV__nc|ENSG00000160310|P55345-5|PRMT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2184143066406	2	483.216526	964.418499	1.5048	0.00072714	2.0355	0.0009836	3.5403	0.0017107	483.2173493133452	92.876	1.1325	93.323	92.904	94.037	0.44662					63	26	3	0	0	0	0.76255	1	11058	11058		35.618	0.41757	1	748980	+		40096	29968	26698	26710	45672	45672					-0.06513373333700656
PCQCGKSFTH	10	Carbamidomethyl (C)	_PCQC(Carbamidomethyl (C))GKSFTH_	PC(0.131)QC(0.869)GKSFTH		PC(-8.2)QC(8.2)GKSFTH		0	1	0		ENSG00000169155|ENST00000373464|ZBTB43	ENSG00000169155|ENST00000373464|ZBTB43	ENSG00000169155|ENST00000373464|ZBTB43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.7508544921875	2	582.749876	1163.4852	-1.4363	-0.00083698	0.65114	0.00037945	-0.78513	-0.00045753	582.7501946465086	23.957	0.4576	23.957	23.737	24.194	0					35	19	2	0	0	0	0.74274	1	794	794		42.396	6.7778	2	72862			40097	6474	26699	26711	45673	45673	80				-0.09000505834114847
PCQTNRGPERA	11	Unmodified	_PCQTNRGPERA_					0	0	0			REV__ENST00000468408.5_1_2:173940615-174034591:+|nuORF	REV__ENST00000468408.5_1_2:173940615-174034591:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	614.7916870117188	2	614.796203	1227.57785	-0.010947	-6.7302E-06	-3.4921	-0.0021469	-3.503	-0.0021536	614.7938481948718	30.265	0.51124	30.29	29.972	30.483	0.025013					28	12	3	0	0	0	0.638	1	1571	1571		40.058	0.80534	1	75421	+		40098	27183	26700	26712	45674	45674					-0.02683284776344408
PCRAMVSPYVC	11	Unmodified	_PCRAMVSPYVC_					0	0	0		ENST00000375286.7_1_17:73059416-73059569:+|nuORF	ENST00000375286.7_1_17:73059416-73059569:+|nuORF	ENST00000375286.7_1_17:73059416-73059569:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.837890625	2	613.279954	1224.54536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.09	1	79.229	78.729	79.729	0.13883								0	0	0	0.56276	1	7491	7491		30.318	1.1682	1				40099	10796	26701	26713	45675	45675					-0.057935314952146655
PCRDQIIFYKL	11	Unmodified	_PCRDQIIFYKL_					0	0	0			REV__nc|ENSG00000169344|P07911-2|UMOD	REV__nc|ENSG00000169344|P07911-2|UMOD	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2668151855469	3	465.919957	1394.73804	-1.6837	-0.00078445	-1.15	-0.00053582	-2.8337	-0.0013203	465.9190599975339	36.676	0.44744	36.688	36.436	36.883	0.011173					23	9	3	0	0	0	0.17586	1	2398	2398		21.78	0.74819	1	73750	+		40100	21572	26702	26714	45676	45676					0.05646250167956168
PCRQKQWRTSF	11	Unmodified	_PCRQKQWRTSF_					0	0	0			REV__ENSG00000213809|ENST00000240618|KLRK1	REV__ENSG00000213809|ENST00000240618|KLRK1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.7408142089844	3	479.578705	1435.71429	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.366	1	29.322	28.822	29.822	-0.043095								0	0	0	0.56276	1	1532	1532		17.167	3.0807	1		+		40101	23633	26703	26715	45677	45677					0.01385829454125087
PCSPGGGG	8	Unmodified	_PCSPGGGG_					0	0	0		ENSG00000178342|ENST00000316249|KCNG2	ENSG00000178342|ENST00000316249|KCNG2	ENSG00000178342|ENST00000316249|KCNG2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	630.8172607421875	1	631.250437	630.24316	-0.059568	-3.7602E-05	2.4908	0.0015723	2.4312	0.0015347	631.2518356871332	63.396	1.3612	63.362	62.706	64.067	-0.033714					94	53	2	0	0	0	0.4196	1	6100	6100		4.6817	0	1	167200			40102	7199	26704	26716	45678	45678					-0.08675168127922461
PCSPGGGG	8	Unmodified	_PCSPGGGG_					0	0	0		ENSG00000178342|ENST00000316249|KCNG2	ENSG00000178342|ENST00000316249|KCNG2	ENSG00000178342|ENST00000316249|KCNG2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		1	631.250437	630.24316	-0.17734	-0.00011194	2.693	0.0016999	2.5156	0.001588	631.2519246254274	63.182	1.8377	63.176	62.111	63.949	-0.0055504	-0.14855	-1.508E-05	NaN	4.6817	132	84	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	187830			40103	7199	26704	26716							-0.08675168127922461
PCSPGGGG	8	Unmodified	_PCSPGGGG_					0	0	0		ENSG00000178342|ENST00000316249|KCNG2	ENSG00000178342|ENST00000316249|KCNG2	ENSG00000178342|ENST00000316249|KCNG2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		1	631.250437	630.24316	-0.31563	-0.00019924	2.6853	0.0016951	2.3697	0.0014959	631.2520291931686	63.401	1.0179	63.424	62.996	64.014	0.022987	0.098972	-1.9915E-05	NaN	4.6817	68	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137750			40104	7199	26704	26716							-0.08675168127922461
PCTIHPQLA	9	Unmodified	_PCTIHPQLA_					0	0	0			REV__ENST00000532441.5_1_11:104776194-104777802:-|nuORF	REV__ENST00000532441.5_1_11:104776194-104777802:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.2569274902344	2	490.25512	978.495686	4.4093	0.0021617	1.3805	0.0006768	5.7898	0.0028385	490.2556618815464	107.13	2.0845	107.27	105.83	107.92	0.14929					167	83	3	0	0	0	0.77546	1	13097	13097		31.955	1.4512	1	1494000	+		40105	28325	26705	26717	45679	45679					0.005578448826327076
PCTLIVVL	8	Unmodified	_PCTLIVVL_					0	0	0		nc|ENSG00000113327|P18507-1|GABRG2;ENSG00000113327|ENST00000639213|GABRG2;nc|ENSG00000113327|P18507-3|GABRG2	nc|ENSG00000113327|P18507-1|GABRG2	nc|ENSG00000113327|P18507-1|GABRG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.260498046875	2	429.261882	856.509211	-1.8455	-0.00079222	-1.258	-0.00054001	-3.1036	-0.0013322	429.26124468672595	112.03	0.80681	112.01	111.83	112.63	-0.019882					47	25	2	0	0	0	0.83466	1	11974	11974		23.037	0	1	1442400			40106	2715	26706	26718	45680	45680					0.07521702661881591
PCTPWTSR	8	Unmodified	_PCTPWTSR_					0	0	0		ENST00000262366.7_1_16:4382234-4382312:+|nuORF	ENST00000262366.7_1_16:4382234-4382312:+|nuORF	ENST00000262366.7_1_16:4382234-4382312:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	474.2231140136719	2	474.22382	946.433086	0.49089	0.00023279	-1.6917	-0.00080223	-1.2008	-0.00056944	474.2228867992903	68.938	0.71165	69.067	68.79	69.502	0.12838					54	30	3	0	0	0	0.9159	1	6236	6236		44.531	5.7249	1	323050			40107	9433	26707	26719	45681	45681					-0.04227301185551369
PCVANVATTLQ	11	Unmodified	_PCVANVATTLQ_					0	0	0			REV__ENSG00000150990|ENST00000308736|DHX37	REV__ENSG00000150990|ENST00000308736|DHX37	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2938842773438	2	558.789524	1115.56449	-1.8341	-0.0010249	1.5734	0.00087919	-0.26071	-0.00014568	558.7909673827758	43.258	0.47526	44.032	43.748	44.223	0.7738					17	11	2	0	0	0	0.17431	1	3893	3893		31.53	0	1	587720	+		40108	20228	26708	26720	45682	45682					0.011334643916825371
PCYTLDGDNI	10	Unmodified	_PCYTLDGDNI_					0	0	0		ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.7667236328125	2	555.742239	1109.46993	-0.23197	-0.00012892	1.0403	0.00057813	0.80831	0.00044921	555.742604352002	49.295	0.57389	49.271	49.014	49.588	-0.024029					19	12	2	0	0	0	0.37624	1	4234	4234		21.686	2.5822	1	153880			40109	4336	26709	26721	45683	45683					-0.08043094150298202
PCYTLDGDNI	10	Unmodified	_PCYTLDGDNI_					0	0	0		ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	555.742239	1109.46993	-1.2084	-0.00067158	1.7436	0.00096897	0.53513	0.0002974	555.7431251806885	49.387	0.51613	49.387	49.1	49.616	0	0.027307	0.00064104	NaN	20.837	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77674			40110	4336	26709	26721							-0.08043094150298202
PCYTLDGDNI	10	Unmodified	_PCYTLDGDNI_					0	0	0		ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	555.742239	1109.46993	-0.71842	-0.00039926	1.6098	0.00089465	0.89142	0.0004954	555.7429779562151	49.338	0.53163	49.335	49.092	49.624	-0.0030327	-0.023826	0.00049241	NaN	20.837	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191470			40111	4336	26709	26721							-0.08043094150298202
PCYTLDGDNI	10	Unmodified	_PCYTLDGDNI_					0	0	0		ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	555.742239	1109.46993	0.44764	0.00024877	0.76259	0.0004238	1.2102	0.00067258	555.7424815401638	49.341	0.70707	49.341	49.1	49.807	0.00016785	-0.017726	-0.0004493	NaN	20.837	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	187830			40112	4336	26709	26721							-0.08043094150298202
PCYTLDGDNI	10	Unmodified	_PCYTLDGDNI_					0	0	0		ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	555.742239	1109.46993	0.39449	0.00021924	0.37112	0.00020625	0.76561	0.00042548	555.7422389149126	49.458	0.46384	49.501	49.261	49.725	0.042236	0.14151	-0.00088441	NaN	20.837	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	160890			40113	4336	26709	26721							-0.08043094150298202
PCYTLDGDNI	10	Unmodified	_PCYTLDGDNI_					0	0	0		ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	ENSG00000138801|ENST00000265174|PAPSS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	555.742239	1109.46993	-0.062952	-3.4985E-05	0.91834	0.00051036	0.85539	0.00047537	555.7425833103346	49.413	0.56424	49.32	49.069	49.634	-0.093178	-0.039507	-0.00027618	NaN	20.837	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143540			40114	4336	26709	26721							-0.08043094150298202
PDAAENKFD	9	Unmodified	_PDAAENKFD_					0	0	0			REV__nc|ENSG00000103710|Q9NYN1-2|RASL12	REV__nc|ENSG00000103710|Q9NYN1-2|RASL12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.81396484375	2	503.727446	1005.44034	1.1451	0.00057683	-3.6875	-0.0018575	-2.5423	-0.0012806	503.7250942737758	97.08	0.481	97.485	97.178	97.659	0.40498					19	11	2	0	0	0	0.20789	1	11614	11614		42.396	0	1	81816	+		40115	29751	26710	26722	45684	45684					-0.06216290104134714
PDAHIPIL	8	Unmodified	_PDAHIPIL_					0	0	0			REV__ENSG00000171453|ENST00000642195|POLR1C	REV__ENSG00000171453|ENST00000642195|POLR1C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.76519775390625	2	438.252903	874.491253	-0.28877	-0.00012655	0.9218	0.00040398	0.63303	0.00027743	438.2534557166404	59.616	0.24056	60.17	59.998	60.239	0.55323					7	5	2	0	0	0	0.4196	1	6283	6283		25.45	4.5032	1	77934	+		40116	21730	26711	26723	45685	45685					0.048987037313850124
PDALLLIAG	9	Unmodified	_PDALLLIAG_					0	0	0		nc|ENSG00000148482|Q504Y0-2|SLC39A12;nc|ENSG00000148482|Q504Y0-3|SLC39A12;nc|ENSG00000148482|Q504Y0-4|SLC39A12;ENSG00000148482|ENST00000377369|SLC39A12	nc|ENSG00000148482|Q504Y0-2|SLC39A12	nc|ENSG00000148482|Q504Y0-2|SLC39A12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.2106018066406	2	441.768386	881.522219	-0.22238	-9.8242E-05	3.7012	0.0016351	3.4788	0.0015368	441.76996981781076	64.002	0.89348	63.968	63.376	64.269	-0.034256					44	29	2	0	0	0	0.20789	1	6023	6023		3.41	0	1	45874			40117	4965	26712	26724	45686	45686					0.07671857045625075
PDALPPAPSA	10	Unmodified	_PDALPPAPSA_					0	0	0		ENST00000380752.9_1_13:30085169-30085490:-|nuORF	ENST00000380752.9_1_13:30085169-30085490:-|nuORF	ENST00000380752.9_1_13:30085169-30085490:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.24468994140625	2	468.245275	934.475997	-0.1136	-5.3193E-05	-0.96692	-0.00045276	-1.0805	-0.00050595	468.2447176903105	105.86	1.9486	105.84	105.27	107.22	-0.025146					119	45	4	0	0	0	0.74274	1	11503	11503		42.396	8.2236	1	1917000			40118	10933	26713	26725	45687	45687					0.006137921435083626
PDAPDLVL	8	Unmodified	_PDAPDLVL_					0	0	0			REV__ENSG00000111331|ENST00000228928|OAS3	REV__ENSG00000111331|ENST00000228928|OAS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.22747802734375	2	420.229094	838.443634	-1.4714	-0.00061832	-1.5274	-0.00064185	-2.9988	-0.0012602	420.22834377301643	76.819	2.0914	76.909	74.945	77.036	0.089363					112	66	2	0	0	0	0.86791	1	7103	7103		28.254	0	1	246920	+		40119	17866	26714	26726	45688	45688					0.017950047405179248
PDAQIRAIIE	10	Unmodified	_PDAQIRAIIE_					0	0	0			REV__nc|ENSG00000070759|Q96S53-3|TESK2	REV__nc|ENSG00000070759|Q96S53-3|TESK2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	563.3203735351562	2	563.316763	1124.61897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.974	1	55.937	55.437	56.437	-0.036827								0	0	0	0.45132	1	4714	4714		26.693	0	1		+		40120	16612	26715	26727	45689	45689					0.06164799534781196
PDASHCED	8	Unmodified	_PDASHCED_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.156494140625	2	437.1558	872.297046	0.10397	4.545E-05	1.3356	0.00058386	1.4396	0.00062931	437.15629753172794	31.525	1.0115	31.544	31.044	32.055	0.018362					43	23	2	0	0	0	0.85277	1	1699	1699		25.45	4.9683	1	58925			40121	6613	26716	26728	45690	45690					-0.14421040486877246
PDASKPPSH	9	Unmodified	_PDASKPPSH_					0	0	0		ENST00000409870.1_1_2:191045448-191045859:+|nuORF	ENST00000409870.1_1_2:191045448-191045859:+|nuORF	ENST00000409870.1_1_2:191045448-191045859:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2331848144531	2	468.232699	934.450845	-1.1109	-0.00052015	-3.0708	-0.0014378	-4.1816	-0.001958	468.23076724767867	68.371	0.45216	68.404	68.085	68.537	0.033005					26	16	2	0	0	0	0.20789	1	6493	6493		17.365	5.8539	1	68273			40122	11318	26717	26729	45691	45691					-0.01900262659046348
PDATDEEVAPP	11	Unmodified	_PDATDEEVAPP_					0	0	0		nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;ENSG00000107263|ENST00000683357|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.7571411132812	2	570.756401	1139.49825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.186	1	79.317	78.817	79.817	0.13086								0	0	0	0.56276	1	7499	7499		39.253	5.3312	1				40123	2339	26718	26730	45692	45692					-0.06592072969374385
PDATISRPE	9	Unmodified	_PDATISRPE_					0	0	0			REV__nc|ENSG00000110713|P52948-6|NUP98	REV__nc|ENSG00000110713|P52948-6|NUP98	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2978515625	2	493.251089	984.487624	0.050776	2.5045E-05	3.4227	0.0016883	3.4735	0.0017133	493.2525432463669	54.464	0.33373	54.871	54.699	55.032	0.40663					11	7	2	0	0	0	0.20789	1	5526	5526		19.104	9.3979	1	109910	+		40124	17827	26719	26731	45693	45693					-0.005240108331349802
PDATLVVE	8	Unmodified	_PDATLVVE_					0	0	0			REV__nc|ENSG00000155974|Q9Y3R0-3|GRIP1	REV__nc|ENSG00000155974|Q9Y3R0-3|GRIP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.9271545410156	2	422.226551	842.438549	0.3355	0.00014166	2.7731	0.0011709	3.1086	0.0013125	422.2275810249961	56.618	0.47437	56.719	56.449	56.924	0.10044					38	21	2	0	0	0	0.4196	1	4793	4793		16.473	0	1	539040	+		40125	20459	26720	26732	45694	45694					0.011027008779137759
PDAVFAPLGNL	11	Unmodified	_PDAVFAPLGNL_					0	0	0		ENSG00000255690|ENST00000539664|TRIL	ENSG00000255690|ENST00000539664|TRIL	ENSG00000255690|ENST00000539664|TRIL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	557.827880859375	2	557.300581	1112.58661	-1.4283	-0.00079602	-1.6619	-0.00092615	-3.0902	-0.0017222	557.2991360546952	100.97	0.74029	101.13	100.62	101.36	0.15505					41	17	3	0	0	0	0.17502	1	10468	10468		29.17	3.596	1	164570			40126	8889	26721	26733	45695	45695					0.03482012131780721
PDCERRFSSSS	11	Unmodified	_PDCERRFSSSS_					0	0	0		ENSG00000156853|ENST00000287461|ZNF689	ENSG00000156853|ENST00000287461|ZNF689	ENSG00000156853|ENST00000287461|ZNF689	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	635.7764282226562	2	635.777676	1269.5408	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.684	1	57.793	57.293	58.293	0.10873								0	0	0	0.56276	1	4894	4894		35.152	7.2698	1				40127	5394	26722	26734	45696	45696					-0.0831900111277264
PDCHAPTA	8	Unmodified	_PDCHAPTA_					0	0	0		ENST00000564774.5_1_16:84212549-84214094:-|nuORF;nc|ENSG00000103168|Q15572-5|TAF1C;ENST00000564208.5_1_16:84212549-84215086:-|nuORF;nc|ENSG00000103168|Q15572-4|TAF1C;nc|ENSG00000103168|Q15572-2|TAF1C;ENSG00000103168|ENST00000566732|TAF1C;nc|ENSG00000103168|Q15572|TAF1C	ENST00000564774.5_1_16:84212549-84214094:-|nuORF	ENST00000564774.5_1_16:84212549-84214094:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.1756286621094	2	406.173795	810.333038	2.6134	0.0010615	1.5172	0.00061625	4.1306	0.0016778	406.17470361655813	99.321	1.1441	99.683	99.176	100.32	0.36137					76	28	4	0	0	0	0.89962	1	11964	11964		38.806	5.2906	1	2117600			40128	2059	26723	26735	45697	45697					-0.07971538519370824
PDCHAPTA	8	Unmodified	_PDCHAPTA_					0	0	0		ENST00000564774.5_1_16:84212549-84214094:-|nuORF;nc|ENSG00000103168|Q15572-5|TAF1C;ENST00000564208.5_1_16:84212549-84215086:-|nuORF;nc|ENSG00000103168|Q15572-4|TAF1C;nc|ENSG00000103168|Q15572-2|TAF1C;ENSG00000103168|ENST00000566732|TAF1C;nc|ENSG00000103168|Q15572|TAF1C	ENST00000564774.5_1_16:84212549-84214094:-|nuORF	ENST00000564774.5_1_16:84212549-84214094:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.173795	810.333038	-1.7939	-0.00072862	8.9804	0.0036476	7.1866	0.002919	406.1763621463914	99.227	0.74606	99.45	99.287	100.03	0.22262	-0.19875	0.0045995	NaN	38.806	25	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46244			40129	2059	26723	26735							-0.07971538519370824
PDCHAPTA	8	Unmodified	_PDCHAPTA_					0	0	0		ENST00000564774.5_1_16:84212549-84214094:-|nuORF;nc|ENSG00000103168|Q15572-5|TAF1C;ENST00000564208.5_1_16:84212549-84215086:-|nuORF;nc|ENSG00000103168|Q15572-4|TAF1C;nc|ENSG00000103168|Q15572-2|TAF1C;ENSG00000103168|ENST00000566732|TAF1C;nc|ENSG00000103168|Q15572|TAF1C	ENST00000564774.5_1_16:84212549-84214094:-|nuORF	ENST00000564774.5_1_16:84212549-84214094:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	406.173795	810.333038	-1.9275	-0.00078291	7.2184	0.0029319	5.2909	0.002149	406.17665678424373	99.624	0.54704	99.81	99.439	99.986	0.18581	0.16148	0.0031681	NaN	38.806	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37436			40130	2059	26723	26735							-0.07971538519370824
PDCLSGPL	8	Unmodified	_PDCLSGPL_					0	0	0			REV__ENST00000563663.5_1_15:75137426-75165648:-|nuORF	REV__ENST00000563663.5_1_15:75137426-75165648:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	401.194091796875	2	401.194196	800.37384	-1.2617	-0.00050619	-1.7284	-0.00069341	-2.9901	-0.0011996	401.193516495884	82.58	1.097	82.58	82.077	83.174	0					52	26	3	0	0	0	0.89457	1	7700	7700		37.028	0	1	110510	+		40131	28822	26724	26736	45698	45698					-0.03433197199740334
PDCTYTVIS	9	Unmodified	_PDCTYTVIS_					0	0	0			REV__nc|ENSG00000117322|P20023-2|CR2	REV__nc|ENSG00000117322|P20023-2|CR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.7293701171875	2	499.7286	997.442648	-0.068469	-3.4216E-05	-0.097404	-4.8675E-05	-0.16587	-8.2891E-05	499.72846689901934	73.394	0.4699	73.434	73.104	73.574	0.040024					29	18	2	0	0	0	0.64922	1	7021	7021		44.117	5.3107	1	214570	+		40132	18256	26725	26737	45699	45699					-0.056175776907025465
PDDPDTPKEH	10	Unmodified	_PDDPDTPKEH_					0	0	0			REV__ENST00000522469.5_1_5:150075051-150080604:-|nuORF	REV__ENST00000522469.5_1_5:150075051-150080604:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.754150390625	2	575.754192	1149.49383	0.85344	0.00049137	-1.2097	-0.0006965	-0.35627	-0.00020513	575.7532170323534	97.285	1.0634	97.67	97.034	98.097	0.38548					53	25	3	0	0	0	0.3985	1	11688	11688		64.207	23.429	1	591470	+		40133	16913	26726	26738	45700	45700					-0.07493537392292637
PDDPDTPKEH	10	Unmodified	_PDDPDTPKEH_					0	0	0			REV__ENST00000522469.5_1_5:150075051-150080604:-|nuORF	REV__ENST00000522469.5_1_5:150075051-150080604:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.7537841796875	2	575.754192	1149.49383	0.7353	0.00042335	-1.1433	-0.00065824	-0.40796	-0.00023489	575.7532843281754	97.406	1.0627	97.797	97.115	98.178	0.39065					55	25	3	0	0	0	0.3985	1	11758	11758		64.207	14.766	1	523640	+		40134	16913	26726	26738	45701	45701					-0.07493537392292637
PDDPDTPKEH	10	Unmodified	_PDDPDTPKEH_					0	0	0			REV__ENST00000522469.5_1_5:150075051-150080604:-|nuORF	REV__ENST00000522469.5_1_5:150075051-150080604:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	575.754192	1149.49383	0.85344	0.00049137	-1.2097	-0.0006965	-0.35627	-0.00020513	575.7532170323534	97.285	1.0634	97.67	97.034	98.097	0.38548	-0.063261	-4.4961E-05	NaN	64.207	53	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	591470	+		40135	16913	26726	26738							-0.07493537392292637
PDDPDTPKEH	10	Unmodified	_PDDPDTPKEH_					0	0	0			REV__ENST00000522469.5_1_5:150075051-150080604:-|nuORF	REV__ENST00000522469.5_1_5:150075051-150080604:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	575.754192	1149.49383	0.7353	0.00042335	-1.1433	-0.00065824	-0.40796	-0.00023489	575.7532843281754	97.406	1.0627	97.797	97.115	98.178	0.39065	0.063261	3.1553E-05	NaN	64.207	55	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	523640	+		40136	16913	26726	26738							-0.07493537392292637
PDEKIIKKVE	10	Unmodified	_PDEKIIKKVE_					0	0	0			REV__nc|ENSG00000113649|O14776-2|TCERG1	REV__nc|ENSG00000113649|O14776-2|TCERG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2391052246094	3	400.239573	1197.69689	0.049152	1.9673E-05	-1.03	-0.00041223	-0.98081	-0.00039256	400.23915201390855	18.098	0.50438	17.477	17.308	17.813	-0.62141					17	10	2	0	0	0	0.85979	1	342	342		35.178	5.6275	1	290130	+		40137	18006	26727	26739	45702	45702					0.10594812400108822
PDEKIIKKVE	10	Unmodified	_PDEKIIKKVE_					0	0	0			REV__nc|ENSG00000113649|O14776-2|TCERG1	REV__nc|ENSG00000113649|O14776-2|TCERG1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	400.239573	1197.69689	1.895	0.00075847	-2.9117	-0.0011654	-1.0167	-0.00040692	400.2383943894667	17.925	0.51234	17.442	17.232	17.744	-0.48256	-0.017338	-0.0014601	NaN	35.178	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	283060	+		40138	18006	26727	26739							0.10594812400108822
PDEKLALLL	9	Unmodified	_PDEKLALLL_					0	0	0			REV__ENST00000562539.1_1_16:74946047-74949971:-|nuORF	REV__ENST00000562539.1_1_16:74946047-74949971:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.30755615234375	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.201	1	52.201	51.701	52.701	0								0	0	0	0.2969	1	4269	4269		31.955	2.8053	1		+		40139	28801	26728	26740	45703	45703					0.0963208427989457
PDERSDDMCSQ	11	Unmodified	_PDERSDDMCSQ_					0	0	0		nc|ENSG00000139625|Q12852|MAP3K12;ENSG00000139625|ENST00000547488|MAP3K12;ENST00000552365.1_1_12:53874968-53878035:-|nuORF;ENST00000547020.1_1_12:53875694-53876159:-|nuORF;ENST00000551511.5_1_12:53874968-53876159:-|nuORF	nc|ENSG00000139625|Q12852|MAP3K12	nc|ENSG00000139625|Q12852|MAP3K12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	427.3026428222656	3	428.160665	1281.46017	-1.0281	-0.00044017	-0.96137	-0.00041162	-1.9894	-0.00085179	428.1600923367785	64.847	0.13745	64.885	64.783	64.921	0.037849					5	3	2	0	0	0	0.17586	1	5723	5723		11.932	0	1	31230			40140	4383	26729	26741	45704	45704					-0.16930650217977927
PDFIGKTN	8	Unmodified	_PDFIGKTN_					0	0	0			REV__ENST00000374861.7_3_9:104170394-104170451:+|nuORF	REV__ENST00000374861.7_3_9:104170394-104170451:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	446.2314758300781	2	446.232168	890.449782	1.573	0.00070191	-2.5471	-0.0011366	-0.97411	-0.00043468	446.230954277814	103.74	1.7619	103.78	103.07	104.83	0.041481					107	42	3	0	0	0	0.87064	1	11275	11275		29.15	3.5755	1	1977800	+		40141	25802	26730	26742	45705	45705					0.00017522972052574914
PDGECTLH	8	Unmodified	_PDGECTLH_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.18682861328125	2	436.18436	870.354167	4.6619	0.0020334	-0.35633	-0.00015543	4.3056	0.001878	436.18414027593576	106.8	0.35607	106.95	106.71	107.07	0.14929					19	12	2	0	0	0	0.92973	1	13052	13052		50.025	12.865	1	96504	+		40142	16824	26731	26743	45706	45706					-0.0861957321050113
PDGECTLH	8	Unmodified	_PDGECTLH_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.1979064941406	2	436.18436	870.354167	2.4896	0.0010859	1.8375	0.0008015	4.3271	0.0018874	436.18528994796645	100.53	0.76816	100.87	100.57	101.34	0.3459					37	18	3	0	0	0	0.4196	1	12183	12183		26.796	22.48	1	402580	+		40143	16824	26731	26743	45707	45707					-0.0861957321050113
PDGGAKLLKRR	11	Unmodified	_PDGGAKLLKRR_					0	0	0			REV__ENSG00000171843|ENST00000380338|MLLT3	REV__ENSG00000171843|ENST00000380338|MLLT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.8731689453125	2	605.872571	1209.73059	-0.46872	-0.00028398	-0.32899	-0.00019933	-0.79771	-0.00048331	605.8722201329331	100.48	2.0532	100.52	100	102.06	0.039742					113	47	4	0	0	0	0.7144	1	10666	10666		29.17	1.2878	1	1745000	+		40144	21776	26732	26744	45708	45708					0.13411278682542616
PDGGKALRTG	10	Unmodified	_PDGGKALRTG_					0	0	0		nc|ENSG00000107018|P04808-2|RLN1;nc|ENSG00000107014|P04090-2|RLN2	nc|ENSG00000107018|P04808-2|RLN1	nc|ENSG00000107018|P04808-2|RLN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2669982910156	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.8545	2	8295	8199;8295		36.447	4.6484	1	1182200			40145	14836	26733	26745	45709;45710	45710					0.033154016406683695
PDGGKALRTG	10	Unmodified	_PDGGKALRTG_					0	0	0		nc|ENSG00000107018|P04808-2|RLN1;nc|ENSG00000107014|P04090-2|RLN2	nc|ENSG00000107018|P04808-2|RLN1	nc|ENSG00000107018|P04808-2|RLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.26715087890625	2	486.267073	970.519593	-1.6066	-0.00078124	1.8314	0.00089055	0.2248	0.00010932	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.66675	2	8418	8418;8453		46.457	5.8842	1	1531500			40146	14836	26733	26745	45711;45712	45711					0.033154016406683695
PDGGLLLRG	9	Unmodified	_PDGGLLLRG_					0	0	0			REV__ENSG00000186416|ENST00000688521|NKRF	REV__ENSG00000186416|ENST00000688521|NKRF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2606506347656	2	449.261259	896.507966	-1.0968	-0.00049275	-0.18393	-8.2631E-05	-1.2807	-0.00057538	449.2607952075847	68.72	0.63625	68.786	68.468	69.105	0.065506					51	27	3	0	0	0	0.76255	1	6189	6189		35.618	1.4457	1	231580	+		40147	22850	26734	26746	45713	45713					0.05557204617343814
PDGGRRLRQVR	11	Unmodified	_PDGGRRLRQVR_					0	0	0			REV__ENSG00000240857|ENST00000381249|RDH14	REV__ENSG00000240857|ENST00000381249|RDH14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2566833496094	3	437.256843	1308.7487	1.2902	0.00056413	-0.03175	-1.3883E-05	1.2584	0.00055025	437.2568346681843	98.713	2.2467	99.074	98.073	100.32	0.36136					142	55	3	0	0	0	0.73277	1	11894	11894		25.892	0.76573	1	470200	+		40148	23817	26735	26747	45714	45714					0.10667413657233737
PDGGVLRR	8	Unmodified	_PDGGVLRR_					0	0	0		nc|ENSG00000138835|P49796-9|RGS3;nc|ENSG00000138835|P49796-4|RGS3;ENSG00000138835|ENST00000695401|RGS3;nc|ENSG00000138835|P49796-6|RGS3;nc|ENSG00000138835|P49796|RGS3;nc|ENSG00000138835|P49796-5|RGS3	nc|ENSG00000138835|P49796-9|RGS3	nc|ENSG00000138835|P49796-9|RGS3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25177001953125	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.86288	1	7184	7184		26.796	2.5934	1	1788100			40149	4341	26736	26748	45715	45715					0.048394536773685104
PDGGVLRR	8	Unmodified	_PDGGVLRR_					0	0	0		nc|ENSG00000138835|P49796-9|RGS3;nc|ENSG00000138835|P49796-4|RGS3;ENSG00000138835|ENST00000695401|RGS3;nc|ENSG00000138835|P49796-6|RGS3;nc|ENSG00000138835|P49796|RGS3;nc|ENSG00000138835|P49796-5|RGS3	nc|ENSG00000138835|P49796-9|RGS3	nc|ENSG00000138835|P49796-9|RGS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2518310546875	2	435.251226	868.487899	-0.16621	-7.2343E-05	0.40306	0.00017543	0.23685	0.00010309	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.86288	1	7523	7523		26.796	0.10319	1	768200			40150	4341	26736	26748	45716	45716					0.048394536773685104
PDGGVLRR	8	Unmodified	_PDGGVLRR_					0	0	0		nc|ENSG00000138835|P49796-9|RGS3;nc|ENSG00000138835|P49796-4|RGS3;ENSG00000138835|ENST00000695401|RGS3;nc|ENSG00000138835|P49796-6|RGS3;nc|ENSG00000138835|P49796|RGS3;nc|ENSG00000138835|P49796-5|RGS3	nc|ENSG00000138835|P49796-9|RGS3	nc|ENSG00000138835|P49796-9|RGS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25201416015625	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.884	2	7797	7797;7806		33.516	3.0119	1	3292300			40151	4341	26736	26748	45717;45718	45717					0.048394536773685104
PDGGVLRR	8	Unmodified	_PDGGVLRR_					0	0	0		nc|ENSG00000138835|P49796-9|RGS3;nc|ENSG00000138835|P49796-4|RGS3;ENSG00000138835|ENST00000695401|RGS3;nc|ENSG00000138835|P49796-6|RGS3;nc|ENSG00000138835|P49796|RGS3;nc|ENSG00000138835|P49796-5|RGS3	nc|ENSG00000138835|P49796-9|RGS3	nc|ENSG00000138835|P49796-9|RGS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2515869140625	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.85277	2	7680	7662;7680		33.516	1.5607	1	3370400			40152	4341	26736	26748	45719;45720	45720					0.048394536773685104
PDGIKMKK	8	Unmodified	_PDGIKMKK_					0	0	0			REV__ENSG00000136010|ENST00000258494|ALDH1L2	REV__ENSG00000136010|ENST00000258494|ALDH1L2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7822570800781	2	458.767863	915.521173	-1.2549	-0.00057569	3.5408	0.0016244	2.286	0.0010487	458.76989268672395	21.093	0.22467	21.138	20.982	21.207	0.045401					16	10	2	0	0	0	0.38948	1	537	537		87.754	13.238	1	44678	+		40153	19280	26737	26749	45721	45721					0.06003319405056118
PDGIKMKK	8	Unmodified	_PDGIKMKK_					0	0	0			REV__ENSG00000136010|ENST00000258494|ALDH1L2	REV__ENSG00000136010|ENST00000258494|ALDH1L2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.7823486328125	2	458.767863	915.521173	0.041466	1.9023E-05	-3.1544	-0.0014472	-3.113	-0.0014281	458.76621375481614	20.738	0.3207	20.814	20.699	21.02	0.075848					23	15	2	0	0	0	0.38948	1	542	542		99.375	36.397	1	73989	+		40154	19280	26737	26749	45722	45722					0.06003319405056118
PDGLMPHL	8	Unmodified	_PDGLMPHL_					0	0	0			REV__nc|ENSG00000060656|Q92729-3|PTPRU	REV__nc|ENSG00000060656|Q92729-3|PTPRU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.2245788574219	2	440.223288	878.432024	1.7151	0.00075504	2.9153	0.0012834	4.6304	0.0020384	440.2244422550662	16.891	0.31792	16.809	16.735	17.053	-0.0821					17	12	2	0	0	0	0.9159	1	186	186		44.531	5.5096	1	88704	+		40155	16450	26738	26750	45723	45723					-0.012055155544544505
PDGPLRPQ	8	Unmodified	_PDGPLRPQ_					0	0	0			REV__ENST00000461597.1_1_1:156259938-156262721:-|nuORF	REV__ENST00000461597.1_1_1:156259938-156262721:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.2392883300781	2	440.237784	878.461016	1.6858	0.00074214	-0.78692	-0.00034643	0.89886	0.00039571	440.2372510646035	18.42	0.43113	18.341	18.138	18.57	-0.078941					21	16	2	0	0	0	0.89043	1	328	328		35.618	3.6634	1	91606	+		40156	27032	26739	26751	45724	45724					0.016923450661806783
PDGQLADFG	9	Unmodified	_PDGQLADFG_					0	0	0			REV__ENST00000486227.5_1_X:48673225-48673626:+|nuORF	REV__ENST00000486227.5_1_X:48673225-48673626:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.2140808105469	2	460.211432	918.408311	4.3602	0.0020066	2.1173	0.00097442	6.4776	0.002981	460.21235011332533	107.04	0.72292	107.19	106.81	107.53	0.14929					46	22	3	0	0	0	0.77244	1	13066	13066		32.812	3.6629	1	1388300	+		40157	27543	26740	26752	45725	45725					-0.05415657787273176
PDGRWRRWRRR	11	Unmodified	_PDGRWRRWRRR_					0	0	0		ENST00000396912.1_1_7:5085705-5085882:+|nuORF	ENST00000396912.1_1_7:5085705-5085882:+|nuORF	ENST00000396912.1_1_7:5085705-5085882:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.6305541992188	3	532.966286	1595.87703	1.2438	0.00066291	-4.4816	-0.0023885	-3.2378	-0.0017256	532.96372567617	110.43	1.2925	110.47	109.98	111.27	0.031746					63	44	3	0	0	0	0.18386	1	12112	12112		1.2319	0	1	301760			40158	11126	26741	26753	45726	45726					0.10292393690974677
PDGTSKAFVSV	11	Unmodified	_PDGTSKAFVSV_					0	0	0			REV__ENSG00000010671|ENST00000308731|BTK	REV__ENSG00000010671|ENST00000308731|BTK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.288330078125	2	554.287671	1106.56079	-1.3781	-0.00076384	2.5117	0.0013922	1.1337	0.00062837	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.69995	1	2409	2409		31.53	1.2121	1	328550	+		40159	16170	26742	26754	45727	45727					0.011771178894605328
PDIIAHLKSI	10	Unmodified	_PDIIAHLKSI_					0	0	0			REV__nc|ENSG00000112742|P33981-2|TTK	REV__nc|ENSG00000112742|P33981-2|TTK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8298950195312	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.80179	1	9108	9108		39.253	2.8061	1	1489800	+		40160	15893	26743	26755	45728	45728					0.10094577919812764
PDIKNLHIL	9	Unmodified	_PDIKNLHIL_					0	0	0			REV__ENSG00000115365|ENST00000450366|LANCL1	REV__ENSG00000115365|ENST00000450366|LANCL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.817626953125	2	531.818941	1061.62333	0.49482	0.00026316	-4.4068	-0.0023436	-3.912	-0.0020805	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.76255	1	10132	10132		35.618	0.41757	1	1227700	+		40161	18114	26744	26756	45729	45729					0.09498308748334239
PDILILRQIMA	11	Unmodified	_PDILILRQIMA_					0	0	0		nc|ENSG00000076716|O75487-2|GPC4;ENSG00000076716|ENST00000370828|GPC4	nc|ENSG00000076716|O75487-2|GPC4	nc|ENSG00000076716|O75487-2|GPC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8837890625	2	641.881216	1281.74788	-1.1529	-0.00074004	3.0246	0.0019414	1.8717	0.0012014	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.70737	1	10204	10204		30.318	4.7437	1	3521600			40162	1366	26745	26757	45730	45730					0.11827438173349947
PDILILRQIMA	11	Unmodified	_PDILILRQIMA_					0	0	0		nc|ENSG00000076716|O75487-2|GPC4;ENSG00000076716|ENST00000370828|GPC4	nc|ENSG00000076716|O75487-2|GPC4	nc|ENSG00000076716|O75487-2|GPC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8822021484375	2	641.881216	1281.74788	1.4722	0.00094496	0.4387	0.00028159	1.9109	0.0012266	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.70737	2	11706	11706;11718		30.318	6.795	1	4511200			40163	1366	26745	26757	45731;45732	45731					0.11827438173349947
PDISVATLH	9	Unmodified	_PDISVATLH_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.7580871582031	2	476.758549	951.502546	-0.10081	-4.8063E-05	-0.88316	-0.00042105	-0.98397	-0.00046911	476.7579760196992	105.87	1.9761	105.84	104.89	106.87	-0.025146					88	46	4	0	0	0	0.72402	1	11485	11485		38.806	6.8513	1	1046400	+		40164	20677	26746	26758	45733	45733					0.024854810348642786
PDISVATLH	9	Unmodified	_PDISVATLH_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	476.758549	951.502546	-0.10081	-4.8063E-05	-0.88316	-0.00042105	-0.98397	-0.00046911	476.7579760196992	105.87	1.9761	105.84	104.89	106.87	-0.025146	-0.041414	0.00073655	NaN	38.806	88	46	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1046400	+		40165	20677	26746	26758							0.024854810348642786
PDISVATLH	9	Unmodified	_PDISVATLH_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	476.758549	951.502546	2.8121	0.0013407	-3.844	-0.0018327	-1.0319	-0.00049198	476.75658347948973	105.84	1.8209	105.8	105.15	106.97	-0.037148	-0.081173	-0.0020867	NaN	38.806	82	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1208500	+		40166	20677	26746	26758							0.024854810348642786
PDISVATLH	9	Unmodified	_PDISVATLH_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	476.758549	951.502546	-0.29837	-0.00014225	-0.62095	-0.00029604	-0.91931	-0.00043829	476.7580552687677	105.76	1.9842	105.8	104.83	106.81	0.038322	-0.078673	0.00098657	NaN	38.806	83	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1133900	+		40167	20677	26746	26758							0.024854810348642786
PDISVATLH	9	Unmodified	_PDISVATLH_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	476.758549	951.502546	0.78013	0.00037194	0.82668	0.00039412	1.6068	0.00076606	476.75750088047016	105.88	1.5472	105.98	105.53	107.08	0.099007	0.093505	0.0023669	NaN	38.806	61	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	636670	+		40168	20677	26746	26758							0.024854810348642786
PDISVATLH	9	Unmodified	_PDISVATLH_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	476.758549	951.502546	-1.6907	-0.00080604	1.0197	0.00048615	-0.67095	-0.00031988	476.75873439514965	105.92	0.83105	105.99	105.57	106.4	0.07312	0.10776	0.002551	NaN	38.806	42	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	445310	+		40169	20677	26746	26758							0.024854810348642786
PDISVSLLT	9	Unmodified	_PDISVSLLT_					0	0	0		ENSG00000170743|ENST00000318881|SYT9	ENSG00000170743|ENST00000318881|SYT9	ENSG00000170743|ENST00000318881|SYT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7671813964844	2	472.768583	943.522613	0.74188	0.00035074	-3.5197	-0.001664	-2.7778	-0.0013133	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.7932	1	8564	8564		23.042	0.0057756	1	547170			40170	6609	26747	26759	45734	45734					0.04859231974819522
PDITLVHN	8	Unmodified	_PDITLVHN_					0	0	0			REV__nc|ENSG00000007129|Q3KPI0-2|CEACAM21	REV__nc|ENSG00000007129|Q3KPI0-2|CEACAM21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.7447814941406	2	454.745442	907.476331	2.7644	0.0012571	-3.8708	-0.0017602	-1.1064	-0.00050315	454.74355172728065	103.83	1.5253	103.79	103.16	104.69	-0.043755					91	36	4	0	0	0	0.84341	1	11376	11376		24.203	0	1	836250	+		40171	16116	26748	26760	45735	45735					0.01889211863374385
PDITWTKEG	9	Unmodified	_PDITWTKEG_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.2592163085938	2	523.761289	1045.50803	-0.042751	-2.2391E-05	-0.43296	-0.00022677	-0.47572	-0.00024916	523.7607727774529	60.587	0.95979	60.575	60.077	61.037	-0.012203					59	22	4	0	0	0	0.77696	1	5604	5604		31.53	2.3803	1	308610			40172	5333	26749	26761	45736	45736					-0.01290840173351171
PDIVVQPG	8	Unmodified	_PDIVVQPG_					0	0	0		nc|ENSG00000197965|O95297-4|MPZL1;ENST00000422823.1_1_7:64196548-64197094:-|nuORF;nc|ENSG00000197965|O95297-3|MPZL1;ENST00000474729.5_1_1:167734818-167757155:+|nuORF;ENST00000465787.5_1_1:167691238-167742606:+|nuORF;nc|ENSG00000197965|O95297-2|MPZL1;ENSG00000197965|ENST00000359523|MPZL1	nc|ENSG00000197965|O95297-4|MPZL1	nc|ENSG00000197965|O95297-4|MPZL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1937561035156	2	412.729261	823.443968	0.43184	0.00017823	0.015283	6.3078E-06	0.44712	0.00018454	412.72902216489575	82.18	0.80794	82.607	82.275	83.083	0.42645					27	19	2	0	0	0	0.4196	1	9536	9536		24.203	7.7296	1	225330			40173	8218	26750	26762	45737	45737					0.025184244603906336
PDKANANH	8	Unmodified	_PDKANANH_					0	0	0		nc|ENSG00000160293|P52735-3|VAV2;nc|ENSG00000160293|P52735-2|VAV2;ENSG00000160293|ENST00000371850|VAV2	nc|ENSG00000160293|P52735-3|VAV2	nc|ENSG00000160293|P52735-3|VAV2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.2550048828125	2	433.709391	865.404229	1.8273	0.00079252	3.2647	0.0014159	5.092	0.0022085	433.70930191873015	107.06	0.48103	107.17	106.99	107.47	0.10396					19	13	2	0	0	0	0.4196	1	13100	13100		29.15	0	1	253130			40174	5575	26751	26763	45738	45738					-0.03385702490345466
PDKERKEKTK	10	Unmodified	_PDKERKEKTK_					0	0	0		ENST00000330736.9_1_16:89334888-89371640:-|nuORF;ENSG00000167522|ENST00000301030|ANKRD11	ENST00000330736.9_1_16:89334888-89371640:-|nuORF	ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.7632141113281	3	420.241976	1257.7041	0.16809	7.0639E-05	0.75585	0.00031764	0.92395	0.00038828	420.2426097899111	38.03	0.28638	38.124	37.924	38.211	0.094322					11	8	2	0	0	0	0.37624	1	2210	2210		3.2113	0	1	21203			40175	6296	26752	26764	45739	45739					0.08555545000535858
PDKLFTLIEVE	11	Unmodified	_PDKLFTLIEVE_					0	0	0		ENSG00000178127|ENST00000318388|NDUFV2	ENSG00000178127|ENST00000318388|NDUFV2	ENSG00000178127|ENST00000318388|NDUFV2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.8848571777344	3	435.242983	1302.70712	-0.78977	-0.00034374	-1.7224	-0.00074964	-2.5121	-0.0010934	435.24207362898403	27.977	1.0973	27.88	27.316	28.413	-0.096947					38	25	2	0	0	0	0.17334	1	1689	1689		34.087	26.052	1	68104			40176	7187	26753	26765	45740	45740					0.06787375334693024
PDKPLTAVPIL	11	Unmodified	_PDKPLTAVPIL_					0	0	0			REV__chr13:43059012-43065686|14|14.0|0.42|5.05|+|1|TE_info:L1PB1,L1PB1_dup10508,L1,LINE,donor,-,43056899,43059012|None,DNAJC15|26	REV__chr13:43059012-43065686|14|14.0|0.42|5.05|+|1|TE_info:L1PB1,L1PB1_dup10508,L1,LINE,donor,-,43056899,43059012|None,DNAJC15|26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3526611328125	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.75164	1	12638	12638		21.686	0.73882	1	3937500	+		40177	15575	26754	26766	45741	45741					0.12132017751082458
PDLALSALL	9	Unmodified	_PDLALSALL_					0	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.77252197265625	2	456.773668	911.532783	-1.7558	-0.00080201	-0.78548	-0.00035879	-2.5413	-0.0011608	456.7729586253597	89.816	2.3334	89.992	88.581	90.914	0.1758					104	54	4	0	0	0	0.78058	1	8952	8952		30.504	0	1	808890			40178	8803	26755	26767	45742	45742					0.07347839700048553
PDLAPPTPRL	10	Unmodified	_PDLAPPTPRL_					0	0	0			REV__ENSG00000062822|ENST00000440232|POLD1	REV__ENSG00000062822|ENST00000440232|POLD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.8065185546875	2	538.808574	1075.60259	-0.69163	-0.00037266	-2.7906	-0.0015036	-3.4823	-0.0018763	538.8070299475025	90.865	3.8094	90.865	89.559	93.368	0					216	88	3	0	0	0	0.66675	1	8740	8740		46.457	10.838	1	563820	+		40179	16465	26756	26768	45743	45743					0.06781718368642942
PDLERRDLSH	10	Unmodified	_PDLERRDLSH_					0	0	0		nc|ENSG00000130024|Q8WUB8-3|PHF10;ENSG00000130024|ENST00000339209|PHF10;ENST00000452540.1_1_X:154521486-154521618:+|nuORF;ENST00000464779.1_1_6:170117898-170118989:-|nuORF	nc|ENSG00000130024|Q8WUB8-3|PHF10	nc|ENSG00000130024|Q8WUB8-3|PHF10	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.3168334960938	2	619.317825	1236.6211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.613	1	58.723	58.223	59.223	0.11027								0	0	0	0.45132	1	5004	5004		25.574	2.5316	1				40180	3616	26757	26769	45744	45744					0.01225228272573986
PDLGQKRN	8	Unmodified	_PDLGQKRN_					0	0	0			REV__nc|ENSG00000174996|Q9H0B6-2|KLC2	REV__nc|ENSG00000174996|Q9H0B6-2|KLC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.253662109375	2	464.253966	926.493378	-0.76573	-0.00035549	0.99904	0.00046381	0.2333	0.00010831	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.884	1	9644	9644		33.516	4.366	1	1046600	+		40181	22033	26758	26770	45745	45745					0.027191324691784757
PDLHIPPLL	9	Unmodified	_PDLHIPPLL_					0	0	0		ENST00000469691.5_1_1:6522722-6525298:-|nuORF;nc|ENSG00000215788|Q93038-3|TNFRSF25;nc|ENSG00000215788|Q93038-12|TNFRSF25	ENST00000469691.5_1_1:6522722-6525298:-|nuORF	ENST00000469691.5_1_1:6522722-6525298:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2810974121094	2	507.80276	1013.59097	-0.43161	-0.00021918	0.83752	0.00042529	0.4059	0.00020612	507.80297025151935	88.769	0.68469	89.24	88.955	89.64	0.47068					30	16	2	0	0	0	0.20789	1	10517	10517		24.203	0	1	313450			40182	12207	26759	26771	45746	45746					0.08471521345325073
PDLLLPVARR	10	Unmodified	_PDLLLPVARR_					0	0	0		ENST00000540386.5_1_11:66131737-66133984:-|nuORF;nc|ENSG00000174669|Q14542-4|SLC29A2	ENST00000540386.5_1_11:66131737-66133984:-|nuORF	ENST00000540386.5_1_11:66131737-66133984:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.843017578125	2	575.358765	1148.70298	0.97212	0.00055932	-3.9444	-0.0022694	-2.9723	-0.0017101	575.3545854417715	92.306	1.2809	92.351	91.301	92.582	0.045456					42	29	3	0	0	0	0.37624	1	9605	9605		37.812	0	1	71344			40183	13495	26760	26772	45747	45747					0.1345737542230836
PDLQLGLL	8	Unmodified	_PDLQLGLL_					0	0	0			REV__nc|ENSG00000179219|Q8N616|LINC00311	REV__nc|ENSG00000179219|Q8N616|LINC00311	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7600402832031	2	434.760561	867.506569	-1.1839	-0.00051471	-1.2859	-0.00055904	-2.4698	-0.0010738	434.7597390953803	87.854	3.3898	87.854	86.125	89.515	0					151	78	4	0	0	0	0.82464	1	8482	8482		21.702	0	1	789230	+		40184	30064	26761	26773	45748	45748					0.06751570528570028
PDLRPPVD	8	Unmodified	_PDLRPPVD_					0	0	0		ENST00000310164.2_1_X:117957810-117958584:+|nuORF	ENST00000310164.2_1_X:117957810-117958584:+|nuORF	ENST00000310164.2_1_X:117957810-117958584:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	454.7446594238281	2	454.745442	907.476331	-1.1674	-0.00053087	-0.044215	-2.0106E-05	-1.2116	-0.00055098	454.7453088336953	103.87	1.2348	104.04	103.57	104.81	0.17095					57	30	3	0	0	0	0.85277	1	11025	11025		25.45	0	1	408010			40185	9907	26762	26774	45749	45749					0.01889211863374385
PDLRTLTLRH	10	Unmodified	_PDLRTLTLRH_					0	0	0			REV__nc|ENSG00000144857|Q9BWV1|BOC	REV__nc|ENSG00000144857|Q9BWV1|BOC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3540649414062	2	611.356754	1220.69895	0.21558	0.0001318	-1.4776	-0.00090335	-1.262	-0.00077155	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.85934	1	9751	9751		35.618	2.8059	1	5379900	+		40186	29908	26763	26775	45750	45750					0.09743285928584555
PDLVLKAS	8	Unmodified	_PDLVLKAS_					0	0	0		ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7518310546875	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.496	1	77.549	77.049	78.049	0.052696								0	0	0	0.29703	1	7500	7500		37.159	3.6435	1				40187	4987	26764	26776	45751	45751					0.06383284011531032
PDLVLRRRRRV	11	Unmodified	_PDLVLRRRRRV_					0	0	0			REV__ENSG00000176953|ENST00000320805|NFATC2IP	REV__ENSG00000176953|ENST00000320805|NFATC2IP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9739685058594	3	479.307537	1434.90078	0.39102	0.00018742	3.3765	0.0016184	3.7675	0.0018058	479.30919371953996	57.286	0.41842	57.392	57.294	57.713	0.1055					32	20	2	0	0	0	0.17729	1	4845	4845		23.378	5.5448	1	170330	+		40188	22164	26765	26777	45752	45752					0.20072814404829842
PDNCRKIFSLK	11	Unmodified	_PDNCRKIFSLK_					0	0	0			REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.90924072265625	3	440.90794	1319.70199	-0.38907	-0.00017155	3.509	0.0015471	3.1199	0.0013756	440.9093719490249	15.473	0.2338	15.393	15.3	15.534	-0.080017					23	9	4	0	0	0	0.70847	1	31	31		30.139	1.5624	1	498720	+		40189	20201	26766	26778	45753	45753					0.054927929910718376
PDNDQFSNL	9	Unmodified	_PDNDQFSNL_					0	0	0		nc|ENSG00000095002|P43246-2|MSH2;ENSG00000095002|ENST00000233146|MSH2	nc|ENSG00000095002|P43246-2|MSH2	nc|ENSG00000095002|P43246-2|MSH2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.3797607421875	2	525.230353	1048.44615	0.057918	3.042E-05	3.2245	0.0016936	3.2824	0.001724	525.2321787636267	83.927	0.4615	84.362	84.045	84.507	0.43538					17	10	2	0	0	0	0.20789	1	9707	9707		27.047	0	1	62695			40190	1716	26767	26779	45754	45754					-0.07613191592463409
PDNKIRKYVF	10	Unmodified	_PDNKIRKYVF_					0	0	0			REV__ENSG00000132669|ENST00000255006|RIN2	REV__ENSG00000132669|ENST00000255006|RIN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3590698242188	2	640.361505	1278.70846	-0.024279	-1.5547E-05	-3.9154	-0.0025073	-3.9397	-0.0025228	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.86718	1	10140	10140		27.882	1.1893	1	448130	+		40191	19019	26768	26780	45755	45755					0.0802505421411297
PDNKRKLS	8	Unmodified	_PDNKRKLS_					0	0	0		ENSG00000031081|ENST00000264245|ARHGAP31	ENSG00000031081|ENST00000264245|ARHGAP31	ENSG00000031081|ENST00000264245|ARHGAP31	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27801513671875	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.82658	1	8520	8520		21.96	1.013	1	6441000			40192	882	26769	26781	45756	45756					0.06031992020314192
PDNRKLAN	8	Unmodified	_PDNRKLAN_					0	0	0		ENSG00000198553|ENST00000312942|KCNRG	ENSG00000198553|ENST00000312942|KCNRG	ENSG00000198553|ENST00000312942|KCNRG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2539367675781	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.89494	1	7942	7942		37.159	1.5408	1	946850			40193	8285	26770	26782	45757	45757					0.027191324691784757
PDNRKLAN	8	Unmodified	_PDNRKLAN_					0	0	0		ENSG00000198553|ENST00000312942|KCNRG	ENSG00000198553|ENST00000312942|KCNRG	ENSG00000198553|ENST00000312942|KCNRG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2536315917969	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.90523	1	8285	8285		40.778	4.3314	1	1449300			40194	8285	26770	26782	45758	45758					0.027191324691784757
PDNRKLAN	8	Unmodified	_PDNRKLAN_					0	0	0		ENSG00000198553|ENST00000312942|KCNRG	ENSG00000198553|ENST00000312942|KCNRG	ENSG00000198553|ENST00000312942|KCNRG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2533874511719	2	464.253966	926.493378	0.59461	0.00027605	-0.68101	-0.00031616	-0.0864	-4.0112E-05	464.25355465849185	81.523	3.0273	81.667	79.894	82.921	0.14352					163	84	3	0	0	0	0.87064	1	7690	7690		29.15	1.2673	1	434730			40195	8285	26770	26782	45759	45759					0.027191324691784757
PDNRKLAN	8	Unmodified	_PDNRKLAN_					0	0	0		ENSG00000198553|ENST00000312942|KCNRG	ENSG00000198553|ENST00000312942|KCNRG	ENSG00000198553|ENST00000312942|KCNRG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2538146972656	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.89962	1	8074	8074		38.806	1.7777	1	1482000			40196	8285	26770	26782	45760	45760					0.027191324691784757
PDNRKLAN	8	Unmodified	_PDNRKLAN_					0	0	0		ENSG00000198553|ENST00000312942|KCNRG	ENSG00000198553|ENST00000312942|KCNRG	ENSG00000198553|ENST00000312942|KCNRG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2536315917969	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.88601	2	8039	8039;8111		42.396	3.1433	1	1324500			40197	8285	26770	26782	45761;45762	45761					0.027191324691784757
PDNVVLCLLA	10	Unmodified	_PDNVVLCLLA_					0	0	0		nc|ENSG00000116717|P24522-2|GADD45A;ENSG00000116717|ENST00000370986|GADD45A	nc|ENSG00000116717|P24522-2|GADD45A	nc|ENSG00000116717|P24522-2|GADD45A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.7927856445312	2	528.791535	1055.56852	0.035781	1.8921E-05	3.428	0.0018127	3.4637	0.0018316	528.79326255139	36.295	1.3449	36.276	35.876	37.221	-0.018673					75	29	5	0	0	0	0.6116	1	2352	2352		49.442	10.635	1	1122800			40198	2941	26771	26783	45763	45763					0.04295553885413028
PDNVVLCLLA	10	Unmodified	_PDNVVLCLLA_					0	0	0		nc|ENSG00000116717|P24522-2|GADD45A;ENSG00000116717|ENST00000370986|GADD45A	nc|ENSG00000116717|P24522-2|GADD45A	nc|ENSG00000116717|P24522-2|GADD45A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.7930297851562	2	528.791535	1055.56852	-0.70681	-0.00037376	4.0791	0.002157	3.3723	0.0017832	528.7935602407883	36.229	1.4862	36.239	35.797	37.283	0.0092773					80	32	4	0	0	0	0.6116	1	2310	2310		49.442	2.9848	1	1332400			40199	2941	26771	26783	45764	45764					0.04295553885413028
PDNVVLCLLA	10	Unmodified	_PDNVVLCLLA_					0	0	0		nc|ENSG00000116717|P24522-2|GADD45A;ENSG00000116717|ENST00000370986|GADD45A	nc|ENSG00000116717|P24522-2|GADD45A	nc|ENSG00000116717|P24522-2|GADD45A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.793701171875	2	528.791535	1055.56852	-0.18975	-0.00010034	3.8893	0.0020567	3.6996	0.0019563	528.7934615759206	36.24	0.83895	36.271	35.927	36.765	0.031132					57	23	4	0	0	0	0.5766	1	1988	1988		51.335	1.8939	1	593790			40200	2941	26771	26783	45765	45765					0.04295553885413028
PDPFNRQLPD	10	Unmodified	_PDPFNRQLPD_					0	0	0			REV__nc|ENSG00000180667|Q5VVQ6-2|YOD1	REV__nc|ENSG00000180667|Q5VVQ6-2|YOD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.29052734375	2	599.796195	1197.57784	-0.075351	-4.5195E-05	3.7498	0.0022491	3.6744	0.0022039	599.798414666659	54.464	0.34355	54.438	54.302	54.645	-0.025955					14	10	2	0	0	0	0.37624	1	4928	4928		56.721	26.403	1	85353	+		40201	22409	26772	26784	45766	45766					-0.013049615047066254
PDPGAELRSVV	11	Unmodified	_PDPGAELRSVV_					0	0	0		ENST00000504771.2_1_5:118690639-118690939:+|nuORF	ENST00000504771.2_1_5:118690639-118690939:+|nuORF	ENST00000504771.2_1_5:118690639-118690939:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.3074340820312	2	570.306395	1138.59824	0.69096	0.00039406	3.5234	0.0020094	4.2143	0.0024035	570.3076773488507	64.776	0.96075	65.33	64.852	65.813	0.55386					45	23	3	0	0	0	0.72106	1	7050	7050		28.081	2.0181	1	663280			40202	12912	26773	26785	45767	45767					0.034482091550898986
PDPGAHPI	8	Unmodified	_PDPGAHPI_					0	0	0		ENST00000553932.5_1_14:39307256-39307550:-|nuORF	ENST00000553932.5_1_14:39307256-39307550:-|nuORF	ENST00000553932.5_1_14:39307256-39307550:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	402.2051696777344	2	402.205953	802.397353	-1.0356	-0.00041653	0.5047	0.00020299	-0.53091	-0.00021354	402.2060768778475	98.029	2.4948	98.029	96.767	99.262	0					118	59	3	0	0	0	0.86791	1	9858	9858		28.254	4.0515	1	480830			40203	13712	26774	26786	45768	45768					-0.01175015370915844
PDPGAHPI	8	Unmodified	_PDPGAHPI_					0	0	0		ENST00000553932.5_1_14:39307256-39307550:-|nuORF	ENST00000553932.5_1_14:39307256-39307550:-|nuORF	ENST00000553932.5_1_14:39307256-39307550:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.2051696777344	2	402.205953	802.397353	2.2889	0.00092062	-2.9581	-0.0011898	-0.66913	-0.00026913	402.20469632638094	98.499	3.236	98.444	96.673	99.909	-0.054817					141	75	3	0	0	0	0.86288	1	10588	10588		26.796	0	1	1723900			40204	13712	26774	26786	45769	45769					-0.01175015370915844
PDPLPVRY	8	Unmodified	_PDPLPVRY_					0	0	0		nc|ENSG00000167280|Q8NFI3-2|ENGASE;nc|ENSG00000167280|Q8NFI3-3|ENGASE;ENSG00000167280|ENST00000579016|ENGASE	nc|ENSG00000167280|Q8NFI3-2|ENGASE	nc|ENSG00000167280|Q8NFI3-2|ENGASE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.7638244628906	2	478.763635	955.512717	0.65055	0.00031146	-0.94581	-0.00045282	-0.29526	-0.00014136	478.7629847554191	51.393	0.88005	51.828	51.492	52.372	0.43505					47	20	4	0	0	0	0.93786	1	5089	5089		53.351	5.4358	1	1431000			40205	6283	26775	26787	45770	45770					0.03318088760090632
PDPLVAPV	8	Unmodified	_PDPLVAPV_					0	0	0			REV__ENST00000497343.5_1_3:160473400-160474084:+|nuORF	REV__ENST00000497343.5_1_3:160473400-160474084:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2313537597656	2	404.234179	806.453805	-1.2204	-0.00049332	-1.5408	-0.00062286	-2.7612	-0.0011162	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.86288	1	7898	7898		26.796	1.3459	1	2752600	+		40206	27768	26776	26788	45771	45771					0.04283612465758324
PDPRGLARRL	10	Unmodified	_PDPRGLARRL_					0	0	0			REV__ENST00000506311.1_1_5:34914790-34915562:-|nuORF	REV__ENST00000506311.1_1_5:34914790-34915562:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8425903320312	2	575.843813	1149.67307	-1.6501	-0.00095021	-0.26578	-0.00015305	-1.9159	-0.0011033	575.8434791868526	90.193	1.8473	90.663	90.18	92.028	0.47068					146	46	4	0	0	0	0.86218	1	10716	10716		32.812	0	1	1810000	+		40207	27888	26777	26789	45772	45772					0.10422436476960684
PDPRLSRKSVL	11	Unmodified	_PDPRLSRKSVL_					0	0	0			REV__ENSG00000121481|ENST00000367510|RNF2	REV__ENSG00000121481|ENST00000367510|RNF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3724365234375	2	634.377686	1266.74082	1.3188	0.00083664	-1.7871	-0.0011337	-0.46828	-0.00029707	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.52654	1	12306	12306		50.034	8.6069	1	12917000	+		40208	18457	26778	26790	45773	45773					0.11811841617145546
PDQAVSSSSFL	11	Unmodified	_PDQAVSSSSFL_					0	0	0		ENSG00000173064|ENST00000682272|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4;nc|ENSG00000173064|Q9Y4D8-2|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.273681640625	2	569.274761	1136.53497	0.4898	0.00027883	-0.3771	-0.00021467	0.1127	6.4158E-05	569.2744694870318	58.537	1.2979	58.647	58.343	59.641	0.11027					132	48	4	0	0	0	0.61824	1	5025	5025		42.338	1.258	1	2907600			40209	6820	26779	26791	45774	45774					-0.027837763527941206
PDQNLVALL	9	Unmodified	_PDQNLVALL_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|13|1|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|13|1|sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|13|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.77911376953125	2	491.782025	981.549496	0.64958	0.00031945	-0.75272	-0.00037018	-0.10314	-5.0723E-05	491.7815186629113	50.135	0.81873	50.98	50.641	51.46	0.84501					43	19	3	0	0	0	0.64922	1	4946	4946		44.117	0	1	1893000			40210	14625	26780	26792	45775	45775					0.05798340585999995
PDRLSNKLL	9	Unmodified	_PDRLSNKLL_					0	0	0		nc|ENSG00000187715|Q3ZCT8-2|KBTBD12;ENSG00000187715|ENST00000405109|KBTBD12	nc|ENSG00000187715|Q3ZCT8-2|KBTBD12	nc|ENSG00000187715|Q3ZCT8-2|KBTBD12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.3141479492188	2	528.314023	1054.61349	-0.63246	-0.00033414	0.83828	0.00044288	0.20582	0.00010874	528.3145655024048	98.746	1.1121	98.746	98.15	99.262	0					55	27	3	0	0	0	0.77244	1	9951	9951		32.812	1.2826	1	337340			40211	7874	26781	26793	45776	45776					0.08837120742941806
PDRQRRKREL	10	Unmodified	_PDRQRRKREL_					0	0	0		nc|ENSG00000163935|Q9UHJ3-2|SFMBT1;ENSG00000163935|ENST00000394752|SFMBT1	nc|ENSG00000163935|Q9UHJ3-2|SFMBT1	nc|ENSG00000163935|Q9UHJ3-2|SFMBT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9318542480469	3	451.932248	1352.77491	-1.018	-0.00046007	2.0075	0.00090723	0.98945	0.00044716	451.9330395027802	99.241	2.1396	99.241	98.063	100.2	0					134	52	3	0	0	0	0.86207	1	10040	10040		24.232	7.0651	1	190490			40212	5887	26782	26794	45777	45777					0.11263682828735
PDRQRRKREL	10	Unmodified	_PDRQRRKREL_					0	0	0		nc|ENSG00000163935|Q9UHJ3-2|SFMBT1;ENSG00000163935|ENST00000394752|SFMBT1	nc|ENSG00000163935|Q9UHJ3-2|SFMBT1	nc|ENSG00000163935|Q9UHJ3-2|SFMBT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9326477050781	3	451.932248	1352.77491	1.2214	0.000552	-0.29405	-0.00013289	0.92737	0.00041911	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.8583	1	10811	10811		22.562	1.5294	1	1043200			40213	5887	26782	26794	45778	45778					0.11263682828735
PDRQRRKREL	10	Unmodified	_PDRQRRKREL_					0	0	0		nc|ENSG00000163935|Q9UHJ3-2|SFMBT1;ENSG00000163935|ENST00000394752|SFMBT1	nc|ENSG00000163935|Q9UHJ3-2|SFMBT1	nc|ENSG00000163935|Q9UHJ3-2|SFMBT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.93267822265625	3	451.932248	1352.77491	-1.2127	-0.00054806	2.1165	0.00095653	0.90382	0.00040847	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.86225	1	10272	10272		32.751	6.0008	1	518100			40214	5887	26782	26794	45779	45779					0.11263682828735
PDRRAGRG	8	Unmodified	_PDRRAGRG_					0	0	0			REV__ENST00000322002.4_1_2:5836389-5836659:+|nuORF	REV__ENST00000322002.4_1_2:5836389-5836659:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2419128417969	2	442.744099	883.473646	0.54972	0.00024339	-4.1433	-0.0018344	-3.5936	-0.0015911	442.7422971444111	78.881	2.5612	79.02	77.685	80.246	0.13883					124	89	2	0	0	0	0.4196	1	7381	7381		23.042	8.3784	1	204630	+		40215	25019	26783	26795	45780	45780					0.027248012490872497
PDRRRLPQL	9	Unmodified	_PDRRRLPQL_					0	0	0			REV__ENST00000493208.1_1_5:131825047-131826375:-|nuORF	REV__ENST00000493208.1_1_5:131825047-131826375:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8424682617188	2	575.843813	1149.67307	-1.6501	-0.00095021	-0.26578	-0.00015305	-1.9159	-0.0011033	575.8434791868526	90.193	1.8473	90.663	90.18	92.028	0.47068					146	46	4	0	0	0	0.76764	1	10752	10752		34.173	0	1	1810000	+		40216	26994	26784	26796	45781	45781					0.10422436476983421
PDSAIVNTRR	10	Unmodified	_PDSAIVNTRR_					0	0	0		ENST00000477479.5_1_2:220099420-220101164:+|nuORF;ENSG00000163516|ENST00000323348|ANKZF1	ENST00000477479.5_1_2:220099420-220101164:+|nuORF	ENST00000477479.5_1_2:220099420-220101164:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.8106079101562	2	564.809636	1127.60472	-0.37649	-0.00021265	2.1567	0.0012181	1.7802	0.0010055	564.8107495054859	109.87	1.7926	109.87	109.6	111.4	0					169	64	4	0	0	0	0.86587	1	11403	11403		29.17	0.020503	1	3988700			40217	5812	26785	26797	45782	45782					0.04602147106470511
PDSAIVNTRR	10	Unmodified	_PDSAIVNTRR_					0	0	0		ENST00000477479.5_1_2:220099420-220101164:+|nuORF;ENSG00000163516|ENST00000323348|ANKZF1	ENST00000477479.5_1_2:220099420-220101164:+|nuORF	ENST00000477479.5_1_2:220099420-220101164:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	564.8104858398438	2	564.809636	1127.60472	-1.2607	-0.00071205	2.862	0.0016165	1.6014	0.00090446	564.8111502403638	109.93	1.6377	109.87	109.63	111.26	-0.055077					173	65	5	0	0	0	0.76096	2	11966	11955;11966		41.427	4.4919	1	6827300			40218	5812	26785	26797	45783;45784	45784					0.04602147106470511
PDSDLLLK	8	Unmodified	_PDSDLLLK_					0	0	0		ENSG00000141506|ENST00000447110|PIK3R5;ENST00000578515.5_1_17:8785060-8814811:-|nuORF	ENSG00000141506|ENST00000447110|PIK3R5	ENSG00000141506|ENST00000447110|PIK3R5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.75439453125	2	450.755475	899.496398	-1.264	-0.00056978	-1.5875	-0.00071559	-2.8516	-0.0012854	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.87479	1	7759	7759		30.504	2.6214	1	414240			40219	4507	26786	26798	45785	45785					0.042629628033296285
PDSEVPGRK	9	Unmodified	_PDSEVPGRK_					0	0	0			REV__ENST00000466336.5_1_6:31940188-31948320:+|nuORF	REV__ENST00000466336.5_1_6:31940188-31948320:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.75921630859375	2	492.759081	983.503609	0.12658	6.2372E-05	1.1462	0.00056482	1.2728	0.00062719	492.75956894400673	17.264	0.31963	16.781	16.672	16.991	-0.48256					8	6	2	0	0	0	0.78536	1	234	234		29.15	2.4566	1	141230	+		40220	23484	26787	26799	45786	45786					0.01119695403770038
PDSIITWI	8	Unmodified	_PDSIITWI_					0	0	0			REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7567443847656	2	472.758018	943.501483	-0.28077	-0.00013274	-3.8392	-0.001815	-4.1199	-0.0019477	472.7560511356496	25.548	0.77612	25.507	25.111	25.888	-0.04117					46	21	3	0	0	0	0.89962	1	1064	1064		38.806	1.7777	1	114310	+		40221	21116	26788	26800	45787	45787					0.02747266665949155
PDSLAIARRWP	11	Unmodified	_PDSLAIARRWP_					0	0	0		ENST00000252699.6_1_19:39220380-39220722:+|nuORF	ENST00000252699.6_1_19:39220380-39220722:+|nuORF	ENST00000252699.6_1_19:39220380-39220722:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.857421875	2	641.356754	1280.69895	2.1015	0.0013478	-2.0497	-0.0013146	0.051767	3.3201E-05	641.8572268612736	114.29	2.4777	114.3	113.86	116.34	0.0094528					148	121	2	0	0	0	0.60058	1	13891	13891		44.377	6.5657	1	210520			40222	9311	26789	26801	45788	45788					0.06983285928595251
PDTALLPL	8	Unmodified	_PDTALLPL_					0	0	0			REV__ENST00000548980.1_1_12:54925998-54930034:+|nuORF	REV__ENST00000548980.1_1_12:54925998-54930034:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.22747802734375	2	420.247286	838.48002	-1.7897	-0.00075213	-0.97376	-0.00040922	-2.7635	-0.0011613	420.2466554312667	80.469	0.53779	80.606	80.343	80.88	0.13702					23	14	3	0	0	0	0.4196	1	7650	7650		25.45	1.2474	1	61695	+		40223	18536	26790	26802	45789	45789					0.054318816372301626
PDTIKKNEAQA	11	Unmodified	_PDTIKKNEAQA_					0	0	0			REV__ENSG00000136040|ENST00000258526|PLXNC1	REV__ENSG00000136040|ENST00000258526|PLXNC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.5527038574219	3	405.550698	1213.63027	0.59269	0.00024037	3.9709	0.0016104	4.5636	0.0018508	405.5523269463935	28.869	3.2114	28.696	27.713	30.924	-0.17336					183	75	5	0	0	0	0.68532	1	1801	1801		24.276	0	1	9724600	+		40224	19282	26791	26803	45790	45790					0.031995768382330425
PDTLKVTY	8	Unmodified	_PDTLKVTY_					0	0	0		ENSG00000160255|ENST00000652462|ITGB2;ENST00000498666.5_1_21:46313282-46313576:-|nuORF;ENST00000475170.5_1_21:46306285-46313576:-|nuORF	ENSG00000160255|ENST00000652462|ITGB2	ENSG00000160255|ENST00000652462|ITGB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.75506591796875	2	468.755475	935.496398	-1.3195	-0.00061854	1.5223	0.0007136	0.20279	9.5059E-05	468.7560143965711	57.612	0.87151	58.006	57.697	58.568	0.39407					46	21	4	0	0	0	0.16379	1	6005	6005		110.12	16.113	1	988900			40225	5573	26792	26804	45791	45791					0.02606962803326951
PDTYLQCF	8	Carbamidomethyl (C)	_PDTYLQC(Carbamidomethyl (C))F_	PDTYLQC(1)F		PDTYLQC(41)F		0	1	0			REV__nc|ENSG00000182985|Q9BY67-2|CADM1	REV__nc|ENSG00000182985|Q9BY67-2|CADM1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.2281494140625	2	522.228768	1042.44298	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.348	1	75.743	75.243	76.243	0.39507								0	0	0	0.30045	1	8519	8519		40.573	7.057	1		+		40226	22565	26793	26805	45792	45792	275				-0.0765415797084188
PDVELEDAE	9	Unmodified	_PDVELEDAE_					0	0	0		ENSG00000164080|ENST00000684192|RAD54L2;ENST00000487093.5_1_3:51624427-51671126:+|nuORF	ENSG00000164080|ENST00000684192|RAD54L2	ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.7252502441406	2	508.724569	1015.43459	-1.1056	-0.00056247	1.1757	0.00059812	0.070081	3.5652E-05	508.72470773188326	66.605	0.62052	66.634	66.393	67.013	0.028587					48	29	2	0	0	0	0.43338	1	6297	6297		55.504	9.5523	1	137630			40227	5913	26794	26806	45793	45793					-0.07251433406474916
PDVELEDAE	9	Unmodified	_PDVELEDAE_					0	0	0		ENSG00000164080|ENST00000684192|RAD54L2;ENST00000487093.5_1_3:51624427-51671126:+|nuORF	ENSG00000164080|ENST00000684192|RAD54L2	ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	508.724569	1015.43459	-1.2004	-0.00061067	0.98914	0.0005032	-0.21126	-0.00010747	509.2263199627591	66.841	0.1086	66.841	66.786	66.895	0	0.025638	0.00077798	NaN	55.504	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97453			40228	5913	26794	26806							-0.07251433406474916
PDVELEDAE	9	Unmodified	_PDVELEDAE_					0	0	0		ENSG00000164080|ENST00000684192|RAD54L2;ENST00000487093.5_1_3:51624427-51671126:+|nuORF	ENSG00000164080|ENST00000684192|RAD54L2	ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	508.724569	1015.43459	0.50404	0.00025642	-0.22717	-0.00011556	0.27688	0.00014085	508.72403375702055	66.675	0.24767	66.802	66.725	66.973	0.12649	-0.013986	-0.00045955	NaN	55.504	12	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53605			40229	5913	26794	26806							-0.07251433406474916
PDVELEDAE	9	Unmodified	_PDVELEDAE_					0	0	0		ENSG00000164080|ENST00000684192|RAD54L2;ENST00000487093.5_1_3:51624427-51671126:+|nuORF	ENSG00000164080|ENST00000684192|RAD54L2	ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	508.724569	1015.43459	0.50844	0.00025866	-0.4577	-0.00023284	0.050743	2.5814E-05	508.7245898685712	66.755	0.39083	67.14	66.961	67.352	0.38515	0.32435	-0.00069411	NaN	55.504	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108060			40230	5913	26794	26806							-0.07251433406474916
PDVGKKCQ	8	Unmodified	_PDVGKKCQ_					0	0	0			REV__ENST00000588883.5_1_19:44679604-44681824:+|nuORF	REV__ENST00000588883.5_1_19:44679604-44681824:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2565612792969	2	437.726195	873.437837	-1.1426	-0.00050014	-1.8019	-0.00078872	-2.9444	-0.0012889	437.7251327222907	30.989	0.87713	31.069	30.767	31.644	0.079834					27	19	2	0	0	0	0.4196	1	2080	2080		31.955	5.1588	1	144710	+		40231	29151	26795	26807	45794	45794					-0.0039441704279852274
PDVISALLL	9	Unmodified	_PDVISALLL_					0	0	0		ENST00000477053.5_1_18:20932218-20956810:-|nuORF;ENST00000581444.5_1_18:20889645-20956810:-|nuORF	ENST00000477053.5_1_18:20932218-20956810:-|nuORF	ENST00000477053.5_1_18:20932218-20956810:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7894592285156	2	470.789318	939.564084	0.26544	0.00012497	2.2731	0.0010701	2.5385	0.0011951	470.7900478703474	44.332	1.0266	44.381	43.794	44.821	0.048996					40	24	2	0	0	0	0.78058	1	3143	3143		30.504	0	1	109700			40232	12350	26796	26808	45795	45795					0.09188412734147278
PDVRVLPG	8	Unmodified	_PDVRVLPG_					0	0	0		ENSG00000158445|ENST00000371741|KCNB1	ENSG00000158445|ENST00000371741|KCNB1	ENSG00000158445|ENST00000371741|KCNB1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.30255126953125	2	426.750527	851.486502	0.4613	0.00019686	-0.69739	-0.00029761	-0.2361	-0.00010075	426.7496747629371	70.492	0.91591	70.622	70.274	71.19	0.12965					80	46	2	0	0	0	0.4196	1	6383	6383		38.806	0	1	329730			40233	5477	26797	26809	45796	45796					0.05481819588624148
PDVVAKYQAL	10	Unmodified	_PDVVAKYQAL_					0	0	0		nc|ENSG00000144908|O75891-2|ALDH1L1;ENSG00000144908|ENST00000393434|ALDH1L1;nc|ENSG00000144908|O75891-3|ALDH1L1;nc|ENSG00000144908|O75891-4|ALDH1L1;ENST00000473607.5_1_3:125854214-125879740:-|nuORF	nc|ENSG00000144908|O75891-2|ALDH1L1	nc|ENSG00000144908|O75891-2|ALDH1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3056640625	2	552.308406	1102.60226	-1.4446	-0.00079788	-2.0305	-0.0011215	-3.4752	-0.0019194	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.86718	1	9372	9372		27.882	4.3595	1	1677300			40234	4743	26798	26810	45797	45797					0.05506298648788288
PDWKKRWLYWK	11	Unmodified	_PDWKKRWLYWK_					0	0	0		nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313-11|OPA1;nc|ENSG00000198836|O60313-2|OPA1;ENSG00000198836|ENST00000361510|OPA1	nc|ENSG00000198836|O60313-13|OPA1	nc|ENSG00000198836|O60313-13|OPA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7651977539062	3	535.961144	1604.8616	0.29143	0.0001562	-3.636	-0.0019488	-3.3446	-0.0017926	535.9592544555628	32.189	0.60197	32.296	31.973	32.575	0.10707					25	13	3	0	0	0	0.18343	1	2224	2224		5.4129	0	1	175080			40235	8346	26799	26811	45798	45798					0.0833666933058339
PDWKTLPSRG	10	Unmodified	_PDWKTLPSRG_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|134|3|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|134|3|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|134|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.8081665039062	2	578.809105	1155.60366	4.9117	0.0028429	0.91519	0.00052972	5.8268	0.0033726	579.3110711364209	110.79	0.73148	110.84	110.69	111.42	0.049095					39	28	2	0	0	0	0.37624	1	13493	13493		28.081	0	1	127790			40236	14659	26800	26812	45799	45799					0.03207932737541341
PEAAEPKP	8	Unmodified	_PEAAEPKP_					0	0	0		ENST00000330736.9_1_16:89334888-89371640:-|nuORF;ENSG00000167522|ENST00000301030|ANKRD11	ENST00000330736.9_1_16:89334888-89371640:-|nuORF	ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.7184143066406	2	419.718893	837.423233	-1.8624	-0.0007817	1.6945	0.0007112	-0.16797	-7.0499E-05	419.71948576487165	43.657	1.1512	43.665	43.227	44.378	0.0082664					62	27	3	0	0	0	0.90523	1	3028	3028		40.778	1.972	1	963550			40237	6296	26801	26813	45800	45800					-0.0019816591927792615
PEAAEPKP	8	Unmodified	_PEAAEPKP_					0	0	0		ENST00000330736.9_1_16:89334888-89371640:-|nuORF;ENSG00000167522|ENST00000301030|ANKRD11	ENST00000330736.9_1_16:89334888-89371640:-|nuORF	ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7184753417969	2	419.718893	837.423233	0.21807	9.1526E-05	-0.48356	-0.00020296	-0.26549	-0.00011143	419.718555621952	43.498	1.1548	43.555	43.112	44.267	0.056744					66	27	3	0	0	0	0.90523	1	3020	3020		40.778	1.972	1	860890			40238	6296	26801	26813	45801	45801					-0.0019816591927792615
PEAALIQYL	9	Unmodified	_PEAALIQYL_					0	0	0		ENSG00000091009|ENST00000265271|RBM27	ENSG00000091009|ENST00000265271|RBM27	ENSG00000091009|ENST00000265271|RBM27	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8039245605469	2	509.2844	1016.55425	1.6348	0.00083258	-1.9814	-0.0010091	-0.34655	-0.00017649	509.28334133070075	98.808	0.54823	99.17	98.936	99.484	0.36136					17	13	2	0	0	0	0.20789	1	11954	11954		45.952	20.502	1	166590			40239	1663	26802	26814	45802	45802					0.04663224728756177
PEAARPAP	8	Unmodified	_PEAARPAP_					0	0	0		ENST00000334348.7_2_7:76139913-76140000:+|nuORF	REV__ENST00000448467.1_1_22:30939341-30940067:+|nuORF	REV__ENST00000448467.1_1_22:30939341-30940067:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.71917724609375	2	404.719227	807.423902	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.221	1	66.347	65.847	66.847	0.12649								0	0	0	0.29694	1	5877	5877		37.028	0	1				40240	26840	26803	26815	45803	45803					0.012486735204220167
PEAASSALA	9	Unmodified	_PEAASSALA_					0	0	0		ENSG00000173581|ENST00000586790|CCDC106	ENSG00000173581|ENST00000586790|CCDC106	ENSG00000173581|ENST00000586790|CCDC106	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.7098083496094	2	408.708525	815.402498	2.9539	0.0012073	-0.79517	-0.00032499	2.1587	0.00088229	408.7080768116846	16.526	0.29012	16.443	16.347	16.637	-0.083363					15	12	2	0	0	0	0.69914	1	153	153		40.573	10.069	1	90416			40241	6871	26804	26816	45804	45804					-0.012587562989438084
PEACGGNPP	9	Unmodified	_PEACGGNPP_					0	0	0			REV__ENST00000376755.1_1_X:48433346-48433559:+|nuORF	REV__ENST00000376755.1_1_X:48433346-48433559:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.1809387207031	2	421.179078	840.343602	1.7498	0.00073698	2.0058	0.00084481	3.7556	0.0015818	421.18017939989363	98.873	0.70571	99.248	98.905	99.611	0.37554					37	17	3	0	0	0	0.76255	1	11967	11967		35.618	6.4687	1	793150	+		40242	25844	26805	26817	45805	45805					-0.08295555864924609
PEAITAIIVV	10	Unmodified	_PEAITAIIVV_					0	0	0		ENSG00000130545|ENST00000600229|CRB3;nc|ENSG00000130545|Q9BUF7-2|CRB3	ENSG00000130545|ENST00000600229|CRB3	ENSG00000130545|ENST00000600229|CRB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3176879882812	2	513.3157	1024.61685	-0.38757	-0.00019894	2.4414	0.0012532	2.0539	0.0010543	513.3170376628356	53.655	1.47	53.703	53.107	54.577	0.047802					76	53	2	0	0	0	0.86718	1	4373	4373		27.882	2.4321	1	209860			40243	3654	26806	26818	45806	45806					0.10552370796949617
PEAKKARLS	9	Unmodified	_PEAKKARLS_					0	0	0		ENSG00000005189|ENST00000261377|REXO5;nc|ENSG00000005189|Q96IC2-2|REXO5;ENST00000567297.5_1_16:20818275-20837201:+|nuORF	ENSG00000005189|ENST00000261377|REXO5	ENSG00000005189|ENST00000261377|REXO5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.3059387207031	2	500.300916	998.587279	0.74628	0.00037337	-3.1647	-0.0015833	-2.4184	-0.0012099	500.7972119176855	94.338	1.2646	94.502	94.087	95.351	0.16308					81	30	5	0	0	0	0.78058	1	9646	9646		30.504	0	1	626530			40244	676	26807	26819	45807	45807					0.08792851571456595
PEAKVRIEKAL	11	Unmodified	_PEAKVRIEKAL_					0	0	0			REV__ENSG00000100664|ENST00000216554|EIF5	REV__ENSG00000100664|ENST00000216554|EIF5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.8812255859375	2	627.382437	1252.75032	-1.2002	-0.00075298	1.1523	0.00072292	-0.047918	-3.0063E-05	627.3828993948404	113.32	6.698	113.28	113.24	119.94	-0.044777					223	114	4	0	0	0	0.65746	1	12822	12822		37.812	15.852	1	3630600	+		40245	17212	26808	26820	45808	45808					0.13405609902679316
PEAPLPSRK	9	Unmodified	_PEAPLPSRK_					0	0	0		ENSG00000198793|ENST00000361445|MTOR	ENSG00000198793|ENST00000361445|MTOR	ENSG00000198793|ENST00000361445|MTOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.78778076171875	2	497.787641	993.56073	0.10344	5.1491E-05	-0.24665	-0.00012278	-0.14321	-7.1287E-05	497.7873670915065	23.255	0.78478	22.836	22.544	23.328	-0.41879					47	18	4	0	0	0	0.69624	1	1033	1033		40.778	0	1	463980			40246	8334	26809	26821	45809	45809					0.06369162680141471
PEAPPAAPAP	10	Unmodified	_PEAPPAAPAP_					0	0	0		ENSG00000132821|ENST00000373461|VSTM2L	ENSG00000132821|ENST00000373461|VSTM2L	ENSG00000132821|ENST00000373461|VSTM2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	459.2386779785156	2	459.239993	916.465432	-1.1984	-0.00055035	1.3137	0.00060332	0.11533	5.2964E-05	459.24036857381975	47.447	1.199	47.466	47.099	48.298	0.018967					78	36	3	0	0	0	0.81018	1	3585	3585		38.806	0	1	800470			40247	3830	26810	26822	45810	45810					0.0038580948909157087
PEAQQRVGG	9	Unmodified	_PEAQQRVGG_					0	0	0		nc|ENSG00000102606|Q14155-5|ARHGEF7;nc|ENSG00000102606|Q14155-2|ARHGEF7;nc|ENSG00000102606|Q14155-3|ARHGEF7;nc|ENSG00000102606|Q14155|ARHGEF7;ENSG00000102606|ENST00000646102|ARHGEF7;nc|ENSG00000102606|Q14155-6|ARHGEF7;nc|ENSG00000102606|Q14155-1|ARHGEF7;ENST00000483189.1_1_13:111893629-111928079:+|nuORF	nc|ENSG00000102606|Q14155-5|ARHGEF7	nc|ENSG00000102606|Q14155-5|ARHGEF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	471.2422790527344	2	471.243598	940.472643	0.64062	0.00030189	-0.3352	-0.00015796	0.30542	0.00014393	471.2433603925791	85.886	4.3657	86.035	83.833	88.198	0.14884					167	101	2	0	0	0	0.76764	1	8430	8430		34.173	2.2177	1	231870			40248	2012	26811	26823	45811	45811					2.5420895326533355E-05
PEARIYEETL	10	Unmodified	_PEARIYEETL_					0	0	0		nc|ENSG00000110906|Q9H3F6-3|KCTD10;nc|ENSG00000109079|Q13829-2|TNFAIP1;nc|ENSG00000110906|Q9H3F6-2|KCTD10;ENSG00000110906|ENST00000228495|KCTD10;ENSG00000109079|ENST00000226225|TNFAIP1	nc|ENSG00000110906|Q9H3F6-3|KCTD10	nc|ENSG00000110906|Q9H3F6-3|KCTD10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	610.8114624023438	2	610.81151	1219.60847	0.40913	0.0002499	-0.3288	-0.00020084	0.080328	4.9065E-05	610.8110634105407	51.698	0.75191	52.133	51.74	52.492	0.43505					57	17	6	0	0	0	0.046234	3	5155	5131;5143;5155		109.44	31.832	1	2062500			40249	2447	26812	26824	45812;45813;45814	45814					0.007447720896834653
PEARIYEETL	10	Unmodified	_PEARIYEETL_					0	0	0		nc|ENSG00000110906|Q9H3F6-3|KCTD10;nc|ENSG00000109079|Q13829-2|TNFAIP1;nc|ENSG00000110906|Q9H3F6-2|KCTD10;ENSG00000110906|ENST00000228495|KCTD10;ENSG00000109079|ENST00000226225|TNFAIP1	nc|ENSG00000110906|Q9H3F6-3|KCTD10	nc|ENSG00000110906|Q9H3F6-3|KCTD10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	610.8114013671875	2	610.81151	1219.60847	0.8917	0.00054466	-0.98146	-0.00059949	-0.089756	-5.4824E-05	610.8107257743561	51.459	0.66323	52.127	51.813	52.477	0.66729					50	15	5	0	0	0	0.062895	3	5125	5115;5125;5152		106.88	42.673	1	2458000			40250	2447	26812	26824	45815;45816;45817	45816					0.007447720896834653
PEATRVLIV	9	Unmodified	_PEATRVLIV_					0	0	0			REV__ENST00000457478.1_1_2:2900342-2900972:-|nuORF	REV__ENST00000457478.1_1_2:2900342-2900972:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.3045959472656	2	499.305667	996.596781	-0.96764	-0.00048315	0.96	0.00047934	-0.0076312	-3.8103E-06	499.3060154748188	27.377	0.79272	27.201	26.748	27.54	-0.17559					27	17	2	0	0	0	0.77546	1	1574	1574		31.955	0.42505	1	237230	+		40251	26968	26813	26825	45818	45818					0.0983461985700842
PEATRVLIV	9	Unmodified	_PEATRVLIV_					0	0	0			REV__ENST00000457478.1_1_2:2900342-2900972:-|nuORF	REV__ENST00000457478.1_1_2:2900342-2900972:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	499.305667	996.596781	-0.96764	-0.00048315	0.96	0.00047934	-0.0076312	-3.8103E-06	499.3060154748188	27.377	0.79272	27.201	26.748	27.54	-0.17559	0.050633	0.0009876	NaN	31.955	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	237230	+		40252	26968	26813	26825							0.0983461985700842
PEATRVLIV	9	Unmodified	_PEATRVLIV_					0	0	0			REV__ENST00000457478.1_1_2:2900342-2900972:-|nuORF	REV__ENST00000457478.1_1_2:2900342-2900972:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	499.305667	996.596781	1.5068	0.00075238	-1.8116	-0.00090452	-0.30471	-0.00015215	499.3046353376025	27.354	0.8667	27.1	26.544	27.411	-0.25465	-0.050633	-0.0017801	NaN	31.955	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211060	+		40253	26968	26813	26825							0.0983461985700842
PECASHGK	8	Unmodified	_PECASHGK_					0	0	0			REV__ENSG00000141101|ENST00000268802|NOB1	REV__ENSG00000141101|ENST00000268802|NOB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.90667724609375	2	414.68707	827.359587	0.091847	3.8088E-05	-4.4329	-0.0018383	-4.3411	-0.0018002	414.6852279616636	31.542	0.38674	31.622	31.384	31.771	0.079834					12	8	2	0	0	0	0.4196	1	2111	2111		12.959	0	1	91089	+		40254	19662	26814	26826	45819	45819					-0.060998496280149084
PECASHGK	8	Unmodified	_PECASHGK_					0	0	0			REV__ENSG00000141101|ENST00000268802|NOB1	REV__ENSG00000141101|ENST00000268802|NOB1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	414.68707	827.359587	-2.0094	-0.00083327	-1.4935	-0.00061933	-3.5029	-0.0014526	414.686389476992	31.248	0.4874	31.248	30.981	31.469	0	-0.089922	0.0012497	NaN	12.959	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33788	+		40255	19662	26814	26826							-0.060998496280149084
PECASHGK	8	Unmodified	_PECASHGK_					0	0	0			REV__ENSG00000141101|ENST00000268802|NOB1	REV__ENSG00000141101|ENST00000268802|NOB1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	414.68707	827.359587	0.099807	4.1389E-05	-3.7012	-0.0015348	-3.6014	-0.0014935	414.6854302963311	31.236	0.68102	31.254	31	31.681	0.01836	-0.08401	-0.00058131	NaN	12.959	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114110	+		40256	19662	26814	26826							-0.060998496280149084
PECASHGK	8	Unmodified	_PECASHGK_					0	0	0			REV__ENSG00000141101|ENST00000268802|NOB1	REV__ENSG00000141101|ENST00000268802|NOB1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	414.68707	827.359587	-0.33273	-0.00013798	-3.0515	-0.0012654	-3.3842	-0.0014034	414.6856838792805	31.406	0.83325	31.355	30.944	31.778	-0.051033	0.016684	-4.2421E-05	NaN	12.959	37	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118110	+		40257	19662	26814	26826							-0.060998496280149084
PECASHGK	8	Unmodified	_PECASHGK_					0	0	0			REV__ENSG00000141101|ENST00000268802|NOB1	REV__ENSG00000141101|ENST00000268802|NOB1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	414.68707	827.359587	-1.9155	-0.00079434	-1.7742	-0.00073572	-3.6897	-0.0015301	414.68624188287686	31.255	0.46759	31.313	31.115	31.582	0.058315	-0.024616	0.0010169	NaN	12.959	35	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62209	+		40258	19662	26814	26826							-0.060998496280149084
PECASHGK	8	Unmodified	_PECASHGK_					0	0	0			REV__ENSG00000141101|ENST00000268802|NOB1	REV__ENSG00000141101|ENST00000268802|NOB1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	414.68707	827.359587	0.10507	4.3572E-05	-3.5049	-0.0014534	-3.3998	-0.0014099	414.68552719764665	30.981	0.35902	31.093	30.973	31.332	0.11198	-0.24513	-0.00041847	NaN	12.959	31	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79989	+		40259	19662	26814	26826							-0.060998496280149084
PECASHGK	8	Unmodified	_PECASHGK_					0	0	0			REV__ENSG00000141101|ENST00000268802|NOB1	REV__ENSG00000141101|ENST00000268802|NOB1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	414.68707	827.359587	0.11552	4.7905E-05	-4.1978	-0.0017408	-4.0823	-0.0016929	414.6853186976941	31.226	0.37946	31.224	30.96	31.339	-0.0022526	-0.1145	-0.0009932	NaN	12.959	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81934	+		40260	19662	26814	26826							-0.060998496280149084
PECASHGK	8	Unmodified	_PECASHGK_					0	0	0			REV__ENSG00000141101|ENST00000268802|NOB1	REV__ENSG00000141101|ENST00000268802|NOB1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	414.68707	827.359587	0.4084	0.00016936	-3.5438	-0.0014696	-3.1354	-0.0013002	414.68523412047097	31.488	0.46757	31.595	31.42	31.888	0.10707	0.25718	-0.00045072	NaN	12.959	12	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74277	+		40261	19662	26814	26826							-0.060998496280149084
PEDAEEVVE	9	Unmodified	_PEDAEEVVE_					0	0	0		ENSG00000196132|ENST00000328439|MYT1;nc|ENSG00000196132|Q01538-2|MYT1	ENSG00000196132|ENST00000328439|MYT1	ENSG00000196132|ENST00000328439|MYT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.72467041015625	2	508.724569	1015.43459	-0.056826	-2.8909E-05	-0.20903	-0.00010634	-0.26585	-0.00013525	508.7241863577969	66.842	0.5735	66.858	66.586	67.159	0.016205					37	26	2	0	0	0	0.67345	1	6258	6258		42.396	3.59	1	108960			40262	8016	26815	26827	45820	45820					-0.07251433406452179
PEDEKTKLI	9	Unmodified	_PEDEKTKLI_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;ENST00000489888.1_1_6:131948430-131949201:-|nuORF;nc|ENSG00000112282|Q9ULK4-6|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.3017578125	2	536.797872	1071.58119	0.13037	6.9984E-05	2.3704	0.0012724	2.5007	0.0013424	536.7974000429033	56.942	0.95939	57.497	57.006	57.965	0.55513					55	22	4	0	0	0	0.30689	1	5920	5920		64.207	2.516	1	1016200			40263	2649	26816	26828	45821	45821					0.0482628854927043
PEDRHDSRPG	10	Unmodified	_PEDRHDSRPG_					0	0	0			REV__ENST00000343139.9_1_6:32605210-32605306:+|nuORF	REV__ENST00000343139.9_1_6:32605210-32605306:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.2689819335938	2	583.270875	1164.5272	-0.21621	-0.00012611	-0.85036	-0.00049599	-1.0666	-0.0006221	583.2707370345603	20.22	0.59764	20.15	19.821	20.419	-0.070011					45	26	2	0	0	0	0.8608	1	481	481		34.173	2.2177	1	46091	+		40264	25289	26817	26829	45822	45822					-0.0484849082972687
PEDSCCCV	8	Unmodified	_PEDSCCCV_					0	0	0		ENST00000374472.4_1_1:24201871-24239835:-|nuORF	ENST00000374472.4_1_1:24201871-24239835:-|nuORF	ENST00000374472.4_1_1:24201871-24239835:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2615966796875	2	428.137707	854.26086	-1.1374	-0.00048695	-3.6261	-0.0015525	-4.7635	-0.0020394	428.1344550146799	91.11	0.16096	91.11	90.984	91.145	0					5	3	2	0	0	0	0.4196	1	8892	8892		14.664	10.679	1	24115			40265	10780	26818	26830	45823	45823					-0.17209956979604613
PEDSPSSF	8	Unmodified	_PEDSPSSF_					0	0	0		ENST00000608236.1_1_1:153950308-153950392:+|nuORF	ENST00000608236.1_1_1:153950308-153950392:+|nuORF	ENST00000608236.1_1_1:153950308-153950392:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2469177246094	2	433.18234	864.350128	1.3747	0.00059552	-4.3992	-0.0019057	-3.0244	-0.0013101	433.18028489826514	97.539	1.1827	97.924	97.159	98.341	0.38548					51	28	2	0	0	0	0.4196	1	11771	11771		31.955	1.4512	1	287760			40266	14473	26819	26831	45824	45824					-0.08747339432557055
PEEALVLLG	9	Unmodified	_PEEALVLLG_					0	0	0			REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7691955566406	2	470.771126	939.527698	-1.6002	-0.00075333	-2.9239	-0.0013765	-4.5241	-0.0021298	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.72402	1	4450	4450		38.806	3.1879	1	1490800	+		40267	28859	26820	26832	45825	45825					0.0555153583743504
PEEALVLLG	9	Unmodified	_PEEALVLLG_					0	0	0			REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7689208984375	2	470.771126	939.527698	-0.93673	-0.00044098	-3.6155	-0.0017021	-4.5522	-0.0021431	470.7692759714824	53.261	1.827	53.278	52.753	54.58	0.017487					126	54	3	0	0	0	0.58151	1	4719	4719		47.916	1.4588	1	1396300	+		40268	28859	26820	26832	45826	45826					0.0555153583743504
PEEALVLLG	9	Unmodified	_PEEALVLLG_					0	0	0			REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7691650390625	2	470.771126	939.527698	-1.0178	-0.00047915	-3.8543	-0.0018145	-4.872	-0.0022936	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.72402	2	4351	4351;4390		38.806	5.9937	1	1648400	+		40269	28859	26820	26832	45827;45828	45827					0.0555153583743504
PEEALVLLG	9	Unmodified	_PEEALVLLG_					0	0	0			REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7691955566406	2	470.771126	939.527698	-1.0146	-0.00047764	-3.1447	-0.0014804	-4.1593	-0.0019581	470.7694800096645	54.93	1.6163	54.986	54.192	55.809	0.055611					122	53	3	0	0	0	0.58151	1	4552	4552		47.916	7.343	1	2574100	+		40270	28859	26820	26832	45829	45829					0.0555153583743504
PEEALVLLG	9	Unmodified	_PEEALVLLG_					0	0	0			REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.768798828125	2	470.771126	939.527698	-0.46989	-0.00022121	-4.4465	-0.0020933	-4.9164	-0.0023145	470.768898093518	52.94	1.6168	52.866	52.471	54.088	-0.074509					101	42	3	0	0	0	0.72402	1	4339	4339		38.806	0.99462	1	1875900	+		40271	28859	26820	26832	45830	45830					0.0555153583743504
PEEALVLLG	9	Unmodified	_PEEALVLLG_					0	0	0			REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.768798828125	2	470.771126	939.527698	-0.26642	-0.00012542	-4.4022	-0.0020724	-4.6686	-0.0021978	470.76897416042203	52.548	1.7695	52.972	52.234	54.003	0.42348					108	42	4	0	0	0	0.58151	1	5260	5260		47.916	5.4411	1	18288000	+		40272	28859	26820	26832	45831	45831					0.0555153583743504
PEEALVLLG	9	Unmodified	_PEEALVLLG_					0	0	0			REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7686767578125	2	470.771126	939.527698	-0.23699	-0.00011157	-4.1917	-0.0019733	-4.4286	-0.0020849	470.7690852138792	80.179	2.0778	80.595	78.892	80.97	0.41621					101	48	4	0	0	0	0.58151	1	9124	9124		47.916	5.5195	1	1333300	+		40273	28859	26820	26832	45832	45832					0.0555153583743504
PEEAVALH	8	Unmodified	_PEEAVALH_					0	0	0			REV__ENSG00000160957|ENST00000617875|RECQL4	REV__ENSG00000160957|ENST00000617875|RECQL4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.2557373046875	2	433.224342	864.434132	0.73513	0.00031848	2.2666	0.00098195	3.0017	0.0013004	433.2256491302425	107.08	0.55164	107.17	106.87	107.42	0.091255					21	13	3	0	0	0	0.4196	1	11488	11488		21.702	7.0382	1	744300	+		40274	20752	26821	26833	45833	45833					-0.0035076354499778972
PEEAYCCH	8	Carbamidomethyl (C)	_PEEAYC(Carbamidomethyl (C))CH_	PEEAYC(0.5)C(0.5)H		PEEAYC(0)C(0)H		0	1	0		ENST00000394275.6_1_15:91477270-91478348:+|nuORF	ENST00000394275.6_1_15:91477270-91478348:+|nuORF	ENST00000394275.6_1_15:91477270-91478348:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.6827087402344	2	504.681127	1007.3477	1.2553	0.00063354	2.5094	0.0012664	3.7647	0.0019	504.6821653460698	97.844	0.91031	98.23	97.847	98.758	0.38548					45	21	3	0	0	0	0.9159	1	11761	11761		44.531	12.576	2	720230			40275	11064	26822	26834	45834	45834	138;139				-0.15567834433534244
PEEEEDAGCR	10	Unmodified	_PEEEEDAGCR_					0	0	0		nc|ENSG00000159784|Q86XD5|FAM131B;ENST00000410085.5_1_7:143053645-143056840:-|nuORF;nc|ENSG00000159784|Q86XD5-2|FAM131B;ENSG00000159784|ENST00000443739|FAM131B	nc|ENSG00000159784|Q86XD5|FAM131B	nc|ENSG00000159784|Q86XD5|FAM131B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	566.7713012695312	2	567.722035	1133.42952	-1.1264	-0.00063947	1.1357	0.00064477	0.0093298	5.2967E-06	567.7229153382908	53.695	0.54462	53.69	53.468	54.013	-0.0053711					22	12	3	0	0	0	0.37624	1	4730	4730		19.997	0	1	73489			40276	5547	26823	26835	45835	45835					-0.13186060540738254
PEEEEEDEDS	10	Unmodified	_PEEEEEDEDS_					0	0	0		ENSG00000198838|ENST00000634891|RYR3;nc|ENSG00000198838|Q15413-2|RYR3	ENSG00000198838|ENST00000634891|RYR3	ENSG00000198838|ENST00000634891|RYR3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3663940429688	2	604.209677	1206.4048	-1.2758	-0.00077083	-0.092686	-5.6002E-05	-1.3684	-0.00082683	604.2092296338856	104.77	0.28329	104.87	104.75	105.03	0.093864					9	6	2	0	0	0	0.37624	1	11096	11096		27.882	11.409	1	37761			40277	8348	26824	26836	45836	45836					-0.1901446193310221
PEEESEDSKMD	11	Unmodified	_PEEESEDSKMD_					0	0	0		nc|ENSG00000078177|Q86UW6-2|N4BP2;ENSG00000078177|ENST00000261435|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.39306640625	2	648.250822	1294.48709	1.8783	0.0012176	3.4789	0.0022552	5.3571	0.0034728	648.2518020612555	106.98	0.21208	107.01	106.9	107.11	0.036888					6	4	2	0	0	0	0.17376	1	11723	11723		32.751	9.2278	1	44878			40278	1393	26825	26837	45837	45837					-0.14837263125832578
PEEESVDP	8	Unmodified	_PEEESVDP_					0	0	0		ENST00000566560.5_1_16:75668010-75682538:-|nuORF;ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1	ENST00000566560.5_1_16:75668010-75682538:-|nuORF	ENST00000566560.5_1_16:75668010-75682538:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9432678222656	2	451.192905	900.371257	-1.6919	-0.00076338	0.5293	0.00023882	-1.1626	-0.00052456	451.19340399145983	53.037	0.18877	53.037	52.908	53.097	0					5	4	2	0	0	0	0.4196	1	4381	4381		6.7355	0	1	23749			40279	1127	26826	26838	45838	45838					-0.08291374123700734
PEEGESSTLSE	11	Unmodified	_PEEGESSTLSE_					0	0	0			REV__nc|ENSG00000168539|P11229-2|CHRM1	REV__nc|ENSG00000168539|P11229-2|CHRM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.7501831054688	2	582.748773	1163.48299	-1.4363	-0.00083698	2.5437	0.0014824	1.1075	0.00064537	582.7501946465086	23.957	0.4576	23.957	23.737	24.194	0					35	19	2	0	0	0	0.60058	1	786	786		44.377	0	1	72862	+		40280	21499	26827	26839	45839	45839					-0.09220984557236989
PEEGESSTLSE	11	Unmodified	_PEEGESSTLSE_					0	0	0			REV__nc|ENSG00000168539|P11229-2|CHRM1	REV__nc|ENSG00000168539|P11229-2|CHRM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	582.748773	1163.48299	0.5841	0.00034038	0.29073	0.00016942	0.87483	0.00050981	582.7491580749821	23.923	0.29726	23.982	23.787	24.084	0.058167	0.058021	-0.0017728	NaN	44.377	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41579	+		40281	21499	26827	26839							-0.09220984557236989
PEEGESSTLSE	11	Unmodified	_PEEGESSTLSE_					0	0	0			REV__nc|ENSG00000168539|P11229-2|CHRM1	REV__nc|ENSG00000168539|P11229-2|CHRM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	582.748773	1163.48299	0.93885	0.00054711	0.20555	0.00011978	1.1444	0.0006669	582.7488668790874	23.8	0.37202	23.802	23.607	23.979	0.0018959	-0.1212	-0.0018721	NaN	44.377	22	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58750	+		40282	21499	26827	26839							-0.09220984557236989
PEEILFEDAF	10	Unmodified	_PEEILFEDAF_					0	0	0		ENSG00000146857|ENST00000662584|STRA8;nc|ENSG00000146857|Q7Z7C7|STRA8	ENSG00000146857|ENST00000662584|STRA8	ENSG00000146857|ENST00000662584|STRA8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.2858276367188	2	605.287337	1208.56012	0.52216	0.00031606	-2.5163	-0.0015231	-1.9942	-0.001207	605.2854781639707	58.165	1.929	58.276	57.865	59.794	0.11027					166	76	4	0	0	0	0.78666	1	4976	4976		35.618	10.168	1	1588900			40283	4865	26828	26840	45840	45840					-0.03581721550244765
PEELGLALV	9	Unmodified	_PEELGLALV_					0	0	0		nc|ENSG00000168016|O15050|TRANK1;ENSG00000168016|ENST00000645898|TRANK1	nc|ENSG00000168016|O15050|TRANK1	nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.767822265625	2	470.771126	939.527698	-1.0221	-0.00048115	-3.257	-0.0015333	-4.2791	-0.0020145	470.76946116999153	50.688	1.1627	50.718	50.343	51.506	0.029629					82	35	3	0	0	0	0.76996	1	4055	4055		33.516	6.7195	1	1717600			40284	6357	26829	26841	45841	45841					0.055515358374123025
PEESDAPSSVE	11	Unmodified	_PEESDAPSSVE_					0	0	0			REV__ENST00000371222.3_1_1:59249016-59249079:-|nuORF	REV__ENST00000371222.3_1_1:59249016-59249079:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.8150024414062	2	573.74349	1145.47243	-0.99814	-0.00057267	-1.5754	-0.00090385	-2.5735	-0.0014765	573.7424241265521	35.989	0.27494	35.97	35.83	36.105	-0.018677					7	5	2	0	0	0	0.17347	1	2287	2287		16.717	9.0271	1	15712	+		40285	25681	26830	26842	45842	45842					-0.09448967211642412
PEEVGSEEKT	10	Unmodified	_PEEVGSEEKT_					0	0	0			REV__nc|ENSG00000100330|Q13615-3|MTMR3	REV__nc|ENSG00000100330|Q13615-3|MTMR3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.7584838867188	2	552.756401	1103.49825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.357	1	78.484	77.984	78.984	0.12695								0	0	0	0.45132	1	7386	7386		37.812	2.1932	1		+		40286	17171	26831	26843	45843	45843					-0.049360729693717076
PEFGCETPL	9	Unmodified	_PEFGCETPL_					0	0	0			REV__ENSG00000140548|ENST00000268154|ZNF710	REV__ENSG00000140548|ENST00000268154|ZNF710	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.23834228515625	2	496.723318	991.432083	-1.7887	-0.00088849	-2.1906	-0.0010881	-3.9793	-0.0019766	496.7220446000785	30.875	0.36832	30.875	30.641	31.01	0					14	11	2	0	0	0	0.20789	1	1434	1434		23.042	3.939	1	35334	+		40287	19629	26832	26844	45844	45844					-0.06397560345112652
PEFNVKHEV	9	Unmodified	_PEFNVKHEV_					0	0	0			REV__ENST00000467100.1_1_9:133456506-133456680:+|nuORF	REV__ENST00000467100.1_1_9:133456506-133456680:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.8287353515625	2	549.782556	1097.55056	-1.7013	-0.00093533	1.2436	0.00068369	-0.45771	-0.00025164	549.7832315890817	48.327	0.52893	48.796	48.506	49.035	0.46941					21	12	2	0	0	0	0.20789	1	4685	4685		34.173	0	1	458830	+		40288	27147	26833	26845	45845	45845					0.005685549549070856
PEGAALLLL	9	Unmodified	_PEGAALLLL_					0	0	0			REV__nc|ENSG00000187260|Q86TI4-4|WDR86	REV__nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.77740478515625	2	448.776211	895.537869	0.53866	0.00024174	2.2804	0.0010234	2.8191	0.0012651	448.77705347531185	49.8	1.8037	49.803	48.884	50.688	0.0035973					74	40	2	0	0	0	0.67235	1	4199	4199		42.474	8.9589	1	176550	+		40289	30112	26834	26846	45846	45846					0.08592143562668753
PEGAALLLL	9	Unmodified	_PEGAALLLL_					0	0	0			REV__nc|ENSG00000187260|Q86TI4-4|WDR86	REV__nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	448.776211	895.537869	0.0087178	3.9124E-06	2.606	0.0011695	2.6147	0.0011734	448.777265701205	49.649	1.8269	49.646	48.477	50.304	-0.0030327	-0.15749	-0.00058002	NaN	42.474	55	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	195160	+		40290	30112	26834	26846							0.08592143562668753
PEGAALLLL	9	Unmodified	_PEGAALLLL_					0	0	0			REV__nc|ENSG00000187260|Q86TI4-4|WDR86	REV__nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	448.776211	895.537869	0.53866	0.00024174	2.2804	0.0010234	2.8191	0.0012651	448.77705347531185	49.8	1.8037	49.803	48.884	50.688	0.0035973	0.00021	-0.00087219	NaN	42.474	74	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176550	+		40291	30112	26834	26846							0.08592143562668753
PEGAALLLL	9	Unmodified	_PEGAALLLL_					0	0	0			REV__nc|ENSG00000187260|Q86TI4-4|WDR86	REV__nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	448.776211	895.537869	-1.3559	-0.00060849	4.562	0.0020473	3.2061	0.0014388	448.7781836722057	49.899	1.6749	49.928	49.211	50.886	0.029629	0.12533	0.0011756	NaN	42.474	89	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191330	+		40292	30112	26834	26846							0.08592143562668753
PEGAALLLL	9	Unmodified	_PEGAALLLL_					0	0	0			REV__nc|ENSG00000187260|Q86TI4-4|WDR86	REV__nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	448.776211	895.537869	-0.43405	-0.00019479	3.4156	0.0015329	2.9816	0.0013381	448.77770031280426	49.928	1.5363	49.835	49.264	50.8	-0.092773	0.031955	0.0001467	NaN	42.474	71	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	259340	+		40293	30112	26834	26846							0.08592143562668753
PEGAALNLSCR	11	Carbamidomethyl (C)	_PEGAALNLSC(Carbamidomethyl (C))R_	PEGAALNLSC(1)R		PEGAALNLSC(46)R		0	1	0		nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1;nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;ENSG00000088827|ENST00000344754|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.29833984375	2	594.295504	1186.57646	-0.76063	-0.00045204	-3.1366	-0.001864	-3.8972	-0.0023161	594.2936203140171	63.021	0.64902	63.409	63.055	63.704	0.3878					30	14	3	0	0	0	0.57736	1	6774	6774		46.457	13.644	1	287950			40294	14795	26835	26847	45847	45847	198				-0.009369188651589866
PEGAALNLSCR	11	Carbamidomethyl (C)	_PEGAALNLSC(Carbamidomethyl (C))R_					0	1	0		nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1;nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;ENSG00000088827|ENST00000344754|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	594.295504	1186.57646	0.04938	2.9346E-05	-3.3934	-0.0020167	-3.344	-0.0019873	594.2931343580949	62.923	0.58934	63.478	63.166	63.755	0.5545	0.034565	-0.00022976	NaN	46.457	30	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310710			40295	14795	26835	26847			198				-0.009369188651589866
PEGCSVPH	8	Unmodified	_PEGCSVPH_					0	0	0			REV__ENSG00000165124|ENST00000374469|SVEP1	REV__ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.18328857421875	2	413.18162	824.348688	2.4158	0.00099815	-0.090388	-3.7347E-05	2.3254	0.0009608	413.18190794566056	101.46	1.3715	101.76	101.48	102.86	0.2999					93	36	5	0	0	0	0.86791	1	12316	12316		28.254	1.4582	1	7829900	+		40296	21151	26836	26848	45848	45848					-0.07051252002304409
PEGFFQVAF	9	Unmodified	_PEGFFQVAF_					0	0	0		ENSG00000158481|ENST00000368170|CD1C	ENSG00000158481|ENST00000368170|CD1C	ENSG00000158481|ENST00000368170|CD1C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.792724609375	2	521.255643	1040.49673	-0.017834	-9.2963E-06	-2.693	-0.0014037	-2.7108	-0.001413	521.25460737869	78.082	0.82656	78.645	78.295	79.121	0.56332					30	19	3	0	0	0	0.20789	1	8970	8970		30.504	0	1	133920			40297	5482	26837	26849	45849	45849					-0.021896174768016863
PEGGAGGKIF	10	Unmodified	_PEGGAGGKIF_					0	0	0			REV__ENST00000301453.7_1_11:63765124-63765358:+|nuORF	REV__ENST00000301453.7_1_11:63765124-63765358:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.74493408203125	2	466.745442	931.476331	-1.3986	-0.0006528	1.9313	0.00090145	0.53273	0.00024865	466.74607133171145	57.712	0.79199	58.106	57.819	58.611	0.39407					40	19	3	0	0	0	0.37206	1	6017	6017		66.429	3.123	1	860290	+		40298	24765	26838	26850	45850	45850					0.007852118633763894
PEGHHLPF	8	Unmodified	_PEGHHLPF_					0	0	0			REV__ENST00000453424.6_1_10:45952959-45953406:-|nuORF	REV__ENST00000453424.6_1_10:45952959-45953406:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.2332763671875	2	467.232502	932.450451	-1.0177	-0.00047551	2.7557	0.0012876	1.738	0.00081207	467.2337824408168	68.11	1.4648	68.17	67.783	69.248	0.059288					157	61	4	0	0	0	0.88915	1	6141	6141		35.201	6.9464	1	2841300	+		40299	26911	26839	26851	45851	45851					-0.018476375882414686
PEGHQLNQCIA	11	Unmodified	_PEGHQLNQCIA_					0	0	0			REV__ENST00000497613.2_1_8:145667249-145667900:-|nuORF	REV__ENST00000497613.2_1_8:145667249-145667900:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.28564453125	2	605.287679	1208.56081	0.98247	0.00059468	-3.4293	-0.0020757	-2.4469	-0.0014811	605.2852052046003	58.208	1.6782	58.295	57.834	59.512	0.087002					167	73	3	0	0	0	0.66009	1	4913	4913		14.865	0	1	1590000	+		40300	27772	26840	26852	45852	45852					-0.035132053821598674
PEGHQWRWWWR	11	Unmodified	_PEGHQWRWWWR_					0	0	0			REV__ENST00000305123.5_1_2:227663257-227663680:-|nuORF	REV__ENST00000305123.5_1_2:227663257-227663680:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2486877441406	4	406.698364	1622.76435	3.0792	0.0012523	-1.0191	-0.00041447	2.0601	0.00083785	406.69880063899785	88.412	0.51913	88.463	88.032	88.551	0.050415					16	12	2	0	0	0	0.18159	1	9059	9059		8.4073	1.7476	1	93886	+		40301	24813	26841	26853	45853	45853					-0.022122998256918436
PEGKETLSK	9	Unmodified	_PEGKETLSK_					0	0	0		ENSG00000112379|ENST00000251691|ARFGEF3	ENSG00000112379|ENST00000251691|ARFGEF3	ENSG00000112379|ENST00000251691|ARFGEF3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30084228515625	2	494.769114	987.523675	-0.58298	-0.00028844	3.7611	0.0018609	3.1781	0.0015724	494.7702139280718	97.038	0.91249	97.269	96.999	97.911	0.23103					29	21	2	0	0	0	0.20789	1	9982	9982		19.997	7.0376	1	154800			40302	2661	26842	26854	45854	45854					0.029414463437319682
PEGLKLISD	9	Unmodified	_PEGLKLISD_					0	0	0		ENSG00000152642|ENST00000282541|GPD1L	ENSG00000152642|ENST00000282541|GPD1L	ENSG00000152642|ENST00000282541|GPD1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.28607177734375	2	486.274032	970.533512	0.40014	0.00019458	0.69285	0.00033691	1.093	0.00053149	486.2736676068269	54.696	0.79471	55.102	54.657	55.452	0.40663					39	18	3	0	0	0	0.20789	1	5599	5599		20.947	4.242	1	399490			40303	5190	26843	26855	45855	45855					0.0470663434908829
PEGLKLISD	9	Unmodified	_PEGLKLISD_					0	0	0		ENSG00000152642|ENST00000282541|GPD1L	ENSG00000152642|ENST00000282541|GPD1L	ENSG00000152642|ENST00000282541|GPD1L	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	486.274032	970.533512	-0.47512	-0.00023104	1.3164	0.00064013	0.84127	0.00040909	486.27440201304074	54.493	0.83914	55.078	54.708	55.548	0.58474	-0.012272	0.00020131	NaN	20.947	39	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	422880			40304	5190	26843	26855							0.0470663434908829
PEGLLDVLI	9	Unmodified	_PEGLLDVLI_					0	0	0			REV__ENST00000464034.5_1_22:24179058-24179882:-|nuORF	REV__ENST00000464034.5_1_22:24179058-24179882:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.28631591796875	2	484.786776	967.558998	-2.6464	-0.0012829	0.82349	0.00039921	-1.8229	-0.00088371	484.78861378184325	41.582	2.0114	41.585	40.8	42.811	0.0034142					135	50	4	0	0	0	0.62081	1	3054	3054		45.952	5.3793	1	1266400	+		40305	27085	26844	26856	45856	45856					0.07392108871522396
PEGLPPDMRP	10	Unmodified	_PEGLPPDMRP_					0	0	0			REV__ENSG00000083750|ENST00000374941|RRAGB	REV__ENSG00000083750|ENST00000374941|RRAGB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8304443359375	2	554.776416	1107.53828	0.51081	0.00028339	-4.0534	-0.0022487	-3.5426	-0.0019653	554.7738672198906	88.422	0.32381	88.871	88.713	89.037	0.44893					11	7	2	0	0	0	0.37624	1	10397	10397		32.812	0.85756	1	54937	+		40306	16860	26845	26857	45857	45857					-0.011188047797986655
PEGLSPAPPA	10	Unmodified	_PEGLSPAPPA_					0	0	0		ENST00000521713.1_1_7:6179681-6199085:+|nuORF;ENSG00000106346|ENST00000306177|USP42;nc|ENSG00000106346|Q9H9J4|USP42;ENST00000479544.6_1_7:6150764-6196715:+|nuORF	ENST00000521713.1_1_7:6179681-6199085:+|nuORF	ENST00000521713.1_1_7:6179681-6199085:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.246337890625	2	468.245275	934.475997	-0.58318	-0.00027307	0.68145	0.00031909	0.098267	4.6013E-05	468.24540363646156	47.508	2.0762	47.505	46.933	49.01	-0.002449					126	59	4	0	0	0	0.86218	1	3951	3951		32.812	0.85756	1	1948700			40307	2291	26846	26858	45858	45858					0.006137921435083626
PEGPHAEQL	9	Unmodified	_PEGPHAEQL_					0	0	0			REV__nc|ENSG00000112782|Q9NZA1|CLIC5	REV__nc|ENSG00000112782|Q9NZA1|CLIC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.23486328125	2	489.237981	976.461409	-0.72549	-0.00035494	-2.4583	-0.0012027	-3.1838	-0.0015576	489.23682827265793	62.903	2.2218	63.017	62.721	64.943	0.11388					298	98	5	0	0	0	0.78058	1	5647	5647		30.504	2.6214	1	3506900	+		40308	29785	26847	26859	45859	45859					-0.027762800046275515
PEGPVWVK	8	Unmodified	_PEGPVWVK_					0	0	0		ENSG00000142798|ENST00000374695|HSPG2	ENSG00000142798|ENST00000374695|HSPG2	ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.2520751953125	2	456.252903	910.491253	-1.6868	-0.0007696	1.5765	0.00071928	-0.1103	-5.0324E-05	456.2528624469303	52.407	1.3098	52.407	51.831	53.141	0					69	34	3	0	0	0	0.87479	1	4296	4296		30.504	2.2494	1	84817			40309	4584	26848	26860	45860	45860					0.03242703731382335
PEGQIILAKWL	11	Unmodified	_PEGQIILAKWL_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.877197265625	2	634.374081	1266.73361	1.4895	0.00094493	2.9274	0.001857	4.4169	0.002802	634.3758226680864	110.81	0.81062	110.93	110.67	111.48	0.11659					64	33	2	0	0	0	0.73893	1	11929	11929		24.519	1.4767	1	300080			40310	7613	26849	26861	45861	45861					0.11091109016706469
PEGQIILAKWL	11	Unmodified	_PEGQIILAKWL_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8768310546875	2	634.374081	1266.73361	6.8453	0.0043425	-1.6881	-0.0010709	5.1572	0.0032716	634.3730039069684	117.9	1.1075	117.8	117.39	118.5	-0.10152					70	51	2	0	0	0	0.73893	1	14063	14063		24.519	0.99649	1	39724			40311	7613	26849	26861	45862	45862					0.11091109016706469
PEGRLVLGG	9	Unmodified	_PEGRLVLGG_					0	0	0			REV__ENST00000543571.5_1_6:150023374-150039241:-|nuORF	REV__ENST00000543571.5_1_6:150023374-150039241:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2606506347656	2	449.261259	896.507966	-0.031705	-1.4244E-05	-1.4161	-0.00063622	-1.4478	-0.00065046	449.26046135217877	71.325	1.0336	71.873	71.284	72.317	0.54756					58	24	3	0	0	0	0.7932	1	7949	7949		23.042	0	1	1233100	+		40312	28508	26850	26862	45863	45863					0.05557204617343814
PEGRVYVI	8	Unmodified	_PEGRVYVI_					0	0	0		ENST00000497602.1_1_2:46070144-46078828:+|nuORF;ENST00000467135.5_1_2:46070144-46072589:+|nuORF;ENSG00000171132|ENST00000306156|PRKCE	ENST00000497602.1_1_2:46070144-46078828:+|nuORF	ENST00000497602.1_1_2:46070144-46078828:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.8055114746094	2	466.763635	931.512717	-1.1208	-0.00052316	1.1094	0.00051781	-0.011477	-5.3571E-06	466.7639803914992	28.933	0.56381	28.904	28.65	29.214	-0.029207					19	12	2	0	0	0	0.4196	1	1817	1817		25.45	10.786	1	169980			40313	6640	26851	26863	45864	45864					0.04422088760088627
PEGRVYVI	8	Unmodified	_PEGRVYVI_					0	0	0		ENST00000497602.1_1_2:46070144-46078828:+|nuORF;ENST00000467135.5_1_2:46070144-46072589:+|nuORF;ENSG00000171132|ENST00000306156|PRKCE	ENST00000497602.1_1_2:46070144-46078828:+|nuORF	ENST00000497602.1_1_2:46070144-46078828:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	466.763635	931.512717	0.29683	0.00013855	0.28001	0.0001307	0.57684	0.00026925	466.7633419032874	29.143	0.47535	28.969	28.717	29.192	-0.17336	0.032868	-0.00049666	NaN	25.45	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185880			40314	6640	26851	26863							0.04422088760088627
PEGTLCWWLY	10	Unmodified	_PEGTLCWWLY_					0	0	0		ENST00000413987.1_1_1:28835701-28835788:+|nuORF	ENST00000413987.1_1_1:28835701-28835788:+|nuORF	ENST00000413987.1_1_1:28835701-28835788:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.3067626953125	3	423.19872	1266.57433	0.050819	2.1506E-05	2.0291	0.00085871	2.0799	0.00088022	423.1995761195661	27.019	0.62629	26.844	26.523	27.149	-0.17559					30	13	4	0	0	0	0.37624	1	1499	1499		28.081	0	1	74466			40315	11356	26852	26864	45865	45865					-0.04829347602935741
PEGTVYDD	8	Unmodified	_PEGTVYDD_					0	0	0		nc|ENSG00000198788|Q02817|MUC2;ENSG00000198788|ENST00000675028|MUC2	nc|ENSG00000198788|Q02817|MUC2	nc|ENSG00000198788|Q02817|MUC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.186279296875	2	448.187623	894.360692	0.85915	0.00038506	-3.915	-0.0017546	-3.0558	-0.0013696	448.1858080523041	98.586	0.84406	98.948	98.525	99.369	0.36136					37	20	3	0	0	0	0.91005	1	11875	11875		42.474	1.9018	1	815360			40316	15201	26853	26865	45866	45866					-0.09071356778144946
PEGVLDGAL	9	Unmodified	_PEGVLDGAL_					0	0	0			REV__ENSG00000114270|ENST00000681320|COL7A1	REV__ENSG00000114270|ENST00000681320|COL7A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.251708984375	2	435.732	869.449448	-1.5519	-0.00067622	-1.6745	-0.00072963	-3.2264	-0.0014059	435.7314912051308	80.482	3.1116	80.619	79.421	82.533	0.13701					113	86	2	0	0	0	0.20789	1	7893	7893		23.042	0	1	87736	+		40317	18037	26854	26866	45867	45867					0.00950103252205281
PEGYKTSKLIS	11	Unmodified	_PEGYKTSKLIS_					0	0	0			REV__nc|ENSG00000176927|A4FU69-6|EFCAB5	REV__nc|ENSG00000176927|A4FU69-6|EFCAB5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3568115234375	2	611.837528	1221.6605	2.4652	0.0015083	-1.9564	-0.001197	0.50874	0.00031126	612.3362427065777	96.75	0.17208	96.694	96.542	96.714	-0.056381					6	3	2	0	0	0	0.17275	1	10372	10372		27.047	0	1	33603	+		40318	22160	26855	26867	45868	45868					0.058539355034326945
PEHCSPLG	8	Unmodified	_PEHCSPLG_					0	0	0			REV__ENST00000603027.5_2_10:75563086-75563657:-|nuORF	REV__ENST00000603027.5_2_10:75563086-75563657:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.1919860839844	2	420.189445	838.364338	1.7374	0.00073004	2.0855	0.00087629	3.8229	0.0016063	420.1905572526673	93.928	4.8779	94.369	91.96	96.838	0.44099					240	120	3	0	0	0	0.884	1	11281	11281		33.516	3.0119	1	4179400	+		40319	29341	26856	26868	45869	45869					-0.061309654852720996
PEHEDICEY	9	Unmodified	_PEHEDICEY_					0	0	0		ENSG00000181788|ENST00000312960|SIAH2	ENSG00000181788|ENST00000312960|SIAH2	ENSG00000181788|ENST00000312960|SIAH2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	566.770263671875	2	567.724046	1133.43354	-0.49771	-0.00028256	-2.8497	-0.0016178	-3.3474	-0.0019004	567.7228295221157	53.668	0.50592	53.644	53.393	53.899	-0.024754					16	11	2	0	0	0	0.20789	1	4775	4775		23.042	3.939	1	77662			40320	7404	26857	26869	45870	45870					-0.12783971047019804
PEHIPPLEK	9	Unmodified	_PEHIPPLEK_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|99|3|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|99|3|sense	L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|99|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2935180664062	2	530.295299	1058.57605	-0.73575	-0.00039016	-2.8196	-0.0014952	-3.5553	-0.0018854	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.78058	1	8973	8973		30.504	2.6214	1	1390700			40321	14695	26858	26870	45871	45871					0.049100294773325004
PEHNPYRPSY	10	Unmodified	_PEHNPYRPSY_					0	0	0		ENSG00000105127|ENST00000269701|AKAP8;ENST00000537303.5_1_19:15472501-15484105:-|nuORF	ENSG00000105127|ENST00000269701|AKAP8	ENSG00000105127|ENST00000269701|AKAP8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.2972412109375	2	630.293819	1258.57309	0.64029	0.00040357	4.4464	0.0028025	5.0867	0.0032061	630.2965544942194	23.374	0.99222	23.435	23.057	24.05	0.060431					84	35	3	0	0	0	0.86549	1	788	788		18.262	0	1	334210			40322	2186	26859	26871	45872	45872					-0.04585845647488895
PEIHICSF	8	Unmodified	_PEIHICSF_					0	0	0			REV__ENSG00000116138|ENST00000375847|DNAJC16	REV__ENSG00000116138|ENST00000375847|DNAJC16	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.2566833496094	2	473.228571	944.442588	-1.375	-0.00065068	0.95197	0.0004505	-0.423	-0.00020018	473.2288107921269	60.164	0.68107	60.717	60.355	61.037	0.55323					27	18	2	0	0	0	0.4196	1	6427	6427		35.201	0	1	387000	+		40323	18182	26860	26872	45873	45873					-0.03185532900022281
PEIILSKGYNK	11	Unmodified	_PEIILSKGYNK_					0	0	0		ENSG00000142875|ENST00000370685|PRKACB;nc|ENSG00000142875|P22694-8|PRKACB;ENST00000536649.5_1_19:14208073-14223129:-|nuORF;nc|ENSG00000142875|P22694-4|PRKACB;nc|ENSG00000142875|P22694-3|PRKACB;nc|ENSG00000072062|P17612-2|PRKACA;nc|ENSG00000142875|P22694|PRKACB;ENSG00000072062|ENST00000308677|PRKACA;nc|ENSG00000142875|P22694-5|PRKACB;nc|ENSG00000142875|P22694-7|PRKACB;nc|ENSG00000142875|P22694-6|PRKACB;nc|ENSG00000142875|P22694-9|PRKACB;ENSG00000165059|ENST00000377276|PRKACG;nc|ENSG00000142875|P22694-10|PRKACB	ENSG00000142875|ENST00000370685|PRKACB;nc|ENSG00000142875|P22694-10|PRKACB	nc|ENSG00000142875|P22694-10|PRKACB	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	631.3562622070312	2	631.36117	1260.70779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.528	1	60.496	59.996	60.996	-0.032509								0	0	0	0.56276	1	5716	5716		44.377	1.5129	1				40324	4587;14971	26861	26873	45874	45874					0.08786214774431755
PEIRMALFGA	10	Unmodified	_PEIRMALFGA_					0	0	0		ENSG00000250565|ENST00000522587|ATP6V1E2	ENSG00000250565|ENST00000522587|ATP6V1E2	ENSG00000250565|ENST00000522587|ATP6V1E2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.2840576171875	2	552.797152	1103.57975	0.06107	3.3759E-05	-4.244	-0.0023461	-4.183	-0.0023123	553.2971249730718	18.933	0.21084	18.303	18.19	18.401	-0.6296					6	4	2	0	0	0	0.37624	1	452	452		34.173	0	1	36572			40325	8847	26862	26874	45875	45875					0.03210375979551827
PEISLLEIL	9	Unmodified	_PEISLLEIL_					0	0	0		ENSG00000109944|ENST00000227349|JHY	ENSG00000109944|ENST00000227349|JHY	ENSG00000109944|ENST00000227349|JHY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8094482421875	2	513.807708	1025.60086	0.35777	0.00018383	2.0927	0.0010753	2.4505	0.0012591	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.7932	1	3969	3969		25.45	0	1	1443600			40326	2495	26863	26875	45876	45876					0.08908664560067336
PEIVCARKLGN	11	Unmodified	_PEIVCARKLGN_					0	0	0		ENST00000366987.6_2_1:212793283-212793454:+|nuORF	ENST00000366987.6_2_1:212793283-212793454:+|nuORF	ENST00000366987.6_2_1:212793283-212793454:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.3329467773438	2	600.33189	1198.64923	-0.31484	-0.00018901	3.8448	0.0023081	3.5299	0.0021191	600.3340171924639	94.652	2.3297	94.652	93.284	95.614	0					94	54	2	0	0	0	0.70737	1	9425	9425		30.318	1.1682	1	234100			40327	10525	26864	26876	45877	45877					0.05784834928294913
PEKIFRPP	8	Unmodified	_PEKIFRPP_					0	0	0			REV__nc|ENSG00000105426|Q13332-7|PTPRS	REV__nc|ENSG00000105426|Q13332-7|PTPRS	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2859802246094	2	492.287277	982.560001	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.79	1	110.91	110.41	111.41	0.11659								0	0	0	0.29498	1	11930	11930		26.796	1.3459	1		+		40328	17538	26865	26877	45878	45878					0.06802368031083006
PEKKVDFKLL	10	Unmodified	_PEKKVDFKLL_					0	0	0			REV__ENSG00000204103|ENST00000373313|MAFB	REV__ENSG00000204103|ENST00000373313|MAFB	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2485046386719	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.3	1	114.33	113.83	114.83	0.026466								0	0	0	0.45132	1	12511	12511		20.03	1.4994	1		+		40329	23456	26866	26878	45879	45879					0.12347706642412959
PEKLKILEWIE	11	Unmodified	_PEKLKILEWIE_					0	0	0		nc|ENSG00000116675|O75061-4|DNAJC6;nc|ENSG00000116675|O75061|DNAJC6;ENSG00000116675|ENST00000371069|DNAJC6	nc|ENSG00000116675|O75061-4|DNAJC6	nc|ENSG00000116675|O75061-4|DNAJC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.6080627441406	3	466.606144	1396.7966	0.76537	0.00035713	3.2827	0.0015317	4.0481	0.0018889	466.60758822103855	100.27	2.2686	100.42	99.189	101.46	0.15073					150	53	4	0	0	0	0.74771	2	10517	10517;10570		22.562	4.097	1	578170			40330	2931	26867	26879	45880;45881	45880					0.11407630014082315
PEKLRVPVDSK	11	Unmodified	_PEKLRVPVDSK_					0	0	0		ENSG00000116996|ENST00000366570|ZP4	ENSG00000116996|ENST00000366570|ZP4	ENSG00000116996|ENST00000366570|ZP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8785400390625	2	634.372069	1266.72959	6.8448	0.0043422	0.68998	0.0004377	7.5348	0.0047799	634.3725377460627	112.61	0.83469	112.63	112.35	113.18	0.016953					37	29	2	0	0	0	0.77421	1	13631	13631		16.717	1.8525	1	45562			40331	2959	26868	26880	45882	45882					0.10689019522988019
PEKLRVPVDSK	11	Unmodified	_PEKLRVPVDSK_					0	0	0		ENSG00000116996|ENST00000366570|ZP4	ENSG00000116996|ENST00000366570|ZP4	ENSG00000116996|ENST00000366570|ZP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3758544921875	2	634.372069	1266.72959	6.8434	0.0043413	1.2949	0.00082147	8.1384	0.0051628	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.72106	1	13749	13749		28.081	1.3886	1	75725			40332	2959	26868	26880	45883	45883					0.10689019522988019
PEKPHTSH	8	Unmodified	_PEKPHTSH_					0	0	0			REV__ENSG00000183034|ENST00000331427|OTOP2	REV__ENSG00000183034|ENST00000331427|OTOP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7348937988281	2	466.732866	931.451179	0.23559	0.00010996	2.6598	0.0012414	2.8953	0.0013514	466.7340279976939	23.781	0.81942	23.399	23.018	23.837	-0.38178					38	18	4	0	0	0	0.884	1	1106	1106		33.516	0	1	358980	+		40333	22570	26869	26881	45884	45884					-0.017288429391896898
PEKPLKGSGF	10	Unmodified	_PEKPLKGSGF_					0	0	0		nc|ENSG00000183864|Q14106-2|TOB2;ENSG00000183864|ENST00000327492|TOB2	nc|ENSG00000183864|Q14106-2|TOB2	nc|ENSG00000183864|Q14106-2|TOB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2933349609375	2	530.295299	1058.57605	-0.034361	-1.8221E-05	-3.4792	-0.001845	-3.5136	-0.0018632	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.60985	1	9377	9377		49.536	16.724	1	1852900			40334	7569	26870	26882	45885	45885					0.049100294773325004
PEKPPASD	8	Unmodified	_PEKPPASD_					0	0	0		ENSG00000277443|ENST00000612661|MARCKS	ENSG00000277443|ENST00000612661|MARCKS	ENSG00000277443|ENST00000612661|MARCKS	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2274169921875	2	420.708525	839.402498	0.14981	6.3026E-05	-2.8838	-0.0012132	-2.734	-0.0011502	420.70755207657885	79.838	0.19837	79.781	79.636	79.834	-0.056503					8	5	2	0	0	0	0.4196	1	8011	8011		30.504	0	1	15966			40335	9020	26871	26883	45886	45886					-0.023627562989531725
PEKTLLKKNPR	11	Unmodified	_PEKTLLKKNPR_					0	0	0		ENST00000493722.1_1_7:108205455-108210073:-|nuORF	ENST00000493722.1_1_7:108205455-108210073:-|nuORF	ENST00000493722.1_1_7:108205455-108210073:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2735595703125	3	441.94175	1322.80342	-1.6349	-0.00072252	-2.8367	-0.0012536	-4.4715	-0.0019762	442.27488917327764	56.546	2.0203	56.546	56.188	58.209	0					207	89	3	0	0	0	0.78351	1	4860	4860		14.779	0.69279	1	695230			40336	12737	26872	26884	45887	45887					0.15492987685320259
PEKTLLKKNPR	11	Unmodified	_PEKTLLKKNPR_					0	0	0		ENST00000493722.1_1_7:108205455-108210073:-|nuORF	ENST00000493722.1_1_7:108205455-108210073:-|nuORF	ENST00000493722.1_1_7:108205455-108210073:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9394226074219	3	441.94175	1322.80342	-1.4755	-0.00065207	-2.8855	-0.0012752	-4.3609	-0.0019273	441.9403125343586	55.224	1.199	55.287	54.704	55.903	0.063725					106	39	3	0	0	0	0.74771	2	4643	4614;4643		22.562	2.9347	1	485540			40337	12737	26872	26884	45888;45889	45889					0.15492987685320259
PEKTLLKKNPR	11	Unmodified	_PEKTLLKKNPR_					0	0	0		ENST00000493722.1_1_7:108205455-108210073:-|nuORF	ENST00000493722.1_1_7:108205455-108210073:-|nuORF	ENST00000493722.1_1_7:108205455-108210073:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.93951416015625	3	441.94175	1322.80342	-1.4729	-0.00065094	-2.9268	-0.0012935	-4.3997	-0.0019444	441.94033054697593	56.641	1.0598	56.713	56.56	57.62	0.071835					108	50	3	0	0	0	0.75457	1	4808	4808		21.032	1.0018	1	756750			40338	12737	26872	26884	45890	45890					0.15492987685320259
PEKVRYKHLL	10	Unmodified	_PEKVRYKHLL_					0	0	0			REV__ENSG00000267978|ENST00000595065|MAGEA9B	REV__ENSG00000267978|ENST00000595065|MAGEA9B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8819580078125	2	641.885147	1281.75574	-0.046992	-3.0164E-05	-4.0766	-0.0026167	-4.1236	-0.0026469	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.86348	1	9779	9779		31.53	3.4483	1	2217900	+		40339	18547	26873	26885	45891	45891					0.12613333485114708
PELALLESF	9	Unmodified	_PELALLESF_					0	0	0			REV__ENST00000286355.9_1_8:132053500-132053857:-|nuORF	REV__ENST00000286355.9_1_8:132053500-132053857:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8077392578125	2	509.776408	1017.53826	0.69772	0.00035568	-0.99456	-0.000507	-0.29684	-0.00015132	509.7757446043232	82.154	0.97655	82.628	82.278	83.255	0.47383					50	23	3	0	0	0	0.20789	1	9592	9592		11.511	0	1	1249900	+		40340	24638	26874	26886	45892	45892					0.030195184918625273
PELFLCIGCAS	11	Carbamidomethyl (C)	_PELFLCIGC(Carbamidomethyl (C))AS_	PELFLC(0.03)IGC(0.97)AS		PELFLC(-15)IGC(15)AS		0	1	0			REV__ENST00000434703.5_1_17:70072534-70072735:-|nuORF	REV__ENST00000434703.5_1_17:70072534-70072735:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.2854614257812	2	605.28576	1208.55697	-0.21892	-0.00013251	0.44755	0.00027089	0.22863	0.00013838	605.285887959875	58.271	1.5426	58.263	57.785	59.328	-0.0074387					123	65	2	0	0	0	0.48529	1	5006	5006		52.937	16.619	2	1563500	+		40341	26668	26875	26887	45893	45893	328				-0.038970112002516544
PELFPRRLAWL	11	Unmodified	_PELFPRRLAWL_					0	0	0			REV__ENST00000424989.1_1_1:37920801-37921029:-|nuORF	REV__ENST00000424989.1_1_1:37920801-37921029:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.607421875	3	466.60659	1396.79794	-0.9304	-0.00043413	3.8121	0.0017788	2.8818	0.0013446	466.6082212965859	101	2.1787	101	99.472	101.65	0					144	51	4	0	0	0	0.76251	1	10247	10247		19.263	3.342	1	331070	+		40342	26526	26876	26888	45894	45894					0.11541308893515634
PELGKLLP	8	Unmodified	_PELGKLLP_					0	0	0			REV__ENST00000376592.5_2_1:11849260-11849482:-|nuORF	REV__ENST00000376592.5_2_1:11849260-11849482:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.7716979980469	2	433.770929	865.527304	1.1273	0.000489	3.9094	0.0016958	5.0367	0.0021848	433.77107498521286	32.677	1.3148	32.889	32.337	33.651	0.21168					85	30	4	0	0	0	0.85277	1	2296	2296		25.45	2.4077	1	1051100	+		40343	25839	26877	26889	45895	45895					0.08916160908222537
PELGKLLP	8	Unmodified	_PELGKLLP_					0	0	0			REV__ENST00000376592.5_2_1:11849260-11849482:-|nuORF	REV__ENST00000376592.5_2_1:11849260-11849482:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	433.770929	865.527304	0.0068718	2.9808E-06	6.3914	0.0027724	6.3982	0.0027754	433.7715568074103	32.708	1.3629	32.834	32.289	33.652	0.12642	-0.027258	0.0011057	NaN	25.45	107	31	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	751650	+		40344	25839	26877	26889							0.08916160908222537
PELGRFIPG	9	Unmodified	_PELGRFIPG_					0	0	0			REV__ENST00000588831.5_1_19:36428245-36428407:+|nuORF	REV__ENST00000588831.5_1_19:36428245-36428407:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.50360107421875	2	493.276909	984.539266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.451	1	75.539	75.039	76.039	0.087631								0	0	0	0.30053	1	6989	6989		30.504	0.6621	1		+		40345	29149	26878	26890	45896	45896					0.04637777651430497
PELIIGNG	8	Unmodified	_PELIIGNG_					0	0	0		nc|ENSG00000134571|Q14896-2|MYBPC3;ENSG00000134571|ENST00000545968|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7291259765625	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.87479	1	7585	7585		30.504	1.3541	1	159770			40346	3945	26879	26891	45897	45897					0.03070424460383947
PELIILGG	8	Unmodified	_PELIILGG_					0	0	0			REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2479553222656	2	406.249829	810.485105	-1.171	-0.0004757	-1.7314	-0.00070337	-2.9023	-0.0011791	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.87276	1	8788	8788		29.842	0	1	30016000	+		40347	21287	26880	26892	45898	45898					0.07228185499855044
PELIILGG	8	Unmodified	_PELIILGG_					0	0	0			REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24822998046875	2	406.249829	810.485105	-0.96192	-0.00039078	-1.7817	-0.00072381	-2.7436	-0.0011146	406.24902234521767	111.59	0.90381	111.59	111.1	112	0					62	31	3	0	0	0	0.82464	1	11587	11587		21.702	0	1	63667	+		40348	21287	26880	26892	45899	45899					0.07228185499855044
PELIILGG	8	Unmodified	_PELIILGG_					0	0	0			REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24798583984375	2	406.249829	810.485105	-0.18598	-7.5555E-05	-2.5531	-0.0010372	-2.7391	-0.0011128	406.2487203598378	111.64	0.79961	111.58	111.26	112.06	-0.059937					46	25	2	0	0	0	0.82464	1	12135	12135		21.702	0	1	69533	+		40349	21287	26880	26892	45900	45900					0.07228185499855044
PELIILGG	8	Unmodified	_PELIILGG_					0	0	0			REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2484130859375	2	406.249829	810.485105	1.1516	0.00046786	-4.2235	-0.0017158	-3.0718	-0.0012479	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.82464	1	9384	9384		21.702	0	1	58759000	+		40350	21287	26880	26892	45901	45901					0.07228185499855044
PELIILGG	8	Unmodified	_PELIILGG_					0	0	0			REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	REV__nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2481689453125	2	406.249829	810.485105	-1.9277	-0.00078311	-1.0996	-0.00044672	-3.0273	-0.0012298	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.89457	1	8929	8929		37.028	0	1	31099000	+		40351	21287	26880	26892	45902	45902					0.07228185499855044
PELKVNHLI	9	Unmodified	_PELKVNHLI_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8167724609375	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.7932	1	8364	8364		21.96	1.4781	1	1159800	+		40352	16368	26881	26893	45903	45903					0.09498308748334239
PELKVNHLI	9	Unmodified	_PELKVNHLI_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8170166015625	2	531.818941	1061.62333	-0.69524	-0.00036974	-3.1977	-0.0017006	-3.8929	-0.0020703	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.76255	1	10219	10219		35.618	0	1	1296000	+		40353	16368	26881	26893	45904	45904					0.09498308748334239
PELLAHVVNL	10	Unmodified	_PELLAHVVNL_					0	0	0		ENSG00000186994|ENST00000330915|KANK3;nc|ENSG00000186994|Q6NY19-1|KANK3	ENSG00000186994|ENST00000330915|KANK3	ENSG00000186994|ENST00000330915|KANK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.82421875	2	552.824224	1103.63389	0.24223	0.00013391	-0.042022	-2.3231E-05	0.20021	0.00011068	552.8240262062169	77.847	0.71408	77.971	77.695	78.409	0.12485					57	23	3	0	0	0	0.30722	2	7316	7316;7321		71.877	1.9892	1	625310			40354	7833	26882	26894	45905;45906	45905					0.08622291402775772
PELLAHVVNL	10	Unmodified	_PELLAHVVNL_					0	0	0		ENSG00000186994|ENST00000330915|KANK3;nc|ENSG00000186994|Q6NY19-1|KANK3	ENSG00000186994|ENST00000330915|KANK3	ENSG00000186994|ENST00000330915|KANK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8248291015625	2	552.824224	1103.63389	0.64746	0.00035793	-0.51514	-0.00028478	0.13232	7.315E-05	552.8237799511401	77.799	0.7224	77.936	77.632	78.354	0.13667					62	25	3	0	0	0	0.44803	4	7333	7308;7324;7333;7341		60.118	15.125	1	521170			40355	7833	26882	26894	45907;45908;45909;45910	45909					0.08622291402775772
PELLAHVVNL	10	Unmodified	_PELLAHVVNL_					0	0	0		ENSG00000186994|ENST00000330915|KANK3;nc|ENSG00000186994|Q6NY19-1|KANK3	ENSG00000186994|ENST00000330915|KANK3	ENSG00000186994|ENST00000330915|KANK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.8242797851562	2	552.824224	1103.63389	-1.0859	-0.00060033	1.3549	0.00074901	0.26894	0.00014868	552.8247634918083	77.88	0.86649	77.972	77.698	78.564	0.091438					80	32	4	0	0	0	0.4892	2	7286	7286;7312		56.721	10.354	1	542910			40356	7833	26882	26894	45911;45912	45911					0.08622291402775772
PELLILSK	8	Unmodified	_PELLILSK_					0	0	0		ENST00000579647.1_1_18:2652874-2652952:-|nuORF	ENST00000579647.1_1_18:2652874-2652952:-|nuORF	ENST00000579647.1_1_18:2652874-2652952:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7903747558594	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.8347	1	3149	3149		23.042	0	1	652510			40357	14089	26883	26895	45913	45913					0.10984716596749422
PELLRQLTY	9	Unmodified	_PELLRQLTY_					0	0	0		nc|ENSG00000005469|Q9UKG9-3|CROT;ENSG00000005469|ENST00000331536|CROT	nc|ENSG00000005469|Q9UKG9-3|CROT	nc|ENSG00000005469|Q9UKG9-3|CROT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.7974853515625	2	566.821681	1131.62881	0.046896	2.6582E-05	-2.1429	-0.0012146	-2.096	-0.0011881	566.821169469426	79.628	0.25496	80.044	79.913	80.168	0.41621					7	5	2	0	0	0	0.20789	1	9113	9113		16.473	0	1	60153			40358	684	26884	26896	45914	45914					0.06825987540150891
PELLSKKIRPE	11	Unmodified	_PELLSKKIRPE_					0	0	0		ENST00000472037.5_1_1:41492959-41493838:-|nuORF	ENST00000472037.5_1_1:41492959-41493838:-|nuORF	ENST00000472037.5_1_1:41492959-41493838:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2674255371094	3	437.266122	1308.77654	1.089	0.00047619	2.708	0.0011841	3.797	0.0016603	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.77511	1	4682	4682		16.53	0.6092	1	2745300			40359	12254	26885	26897	45915	45915					0.13449879074119053
PELPHTEL	8	Unmodified	_PELPHTEL_					0	0	0		nc|ENSG00000147724|Q49AJ0-2|FAM135B;ENST00000482951.6_1_8:139144838-139379577:-|nuORF;ENSG00000147724|ENST00000395297|FAM135B;nc|ENSG00000147724|Q49AJ0-3|FAM135B;nc|ENSG00000147724|Q49AJ0-4|FAM135B	nc|ENSG00000147724|Q49AJ0-2|FAM135B	nc|ENSG00000147724|Q49AJ0-2|FAM135B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2442932128906	2	468.245275	934.475997	0.29201	0.00013673	-0.21451	-0.00010045	0.0775	3.6289E-05	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.9159	1	3677	3677		44.531	0	1	7645500			40360	4921	26886	26898	45916	45916					0.006137921435083626
PELPVLSA	8	Unmodified	_PELPVLSA_					0	0	0		ENSG00000171608|ENST00000377346|PIK3CD	ENSG00000171608|ENST00000377346|PIK3CD	ENSG00000171608|ENST00000377346|PIK3CD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2373962402344	2	413.239461	824.46437	-0.12335	-5.0972E-05	-2.6877	-0.0011107	-2.811	-0.0011616	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.884	1	7487	7487		33.516	1.5607	1	1978800			40361	6687	26887	26899	45917	45917					0.045115951201864846
PELRKKSRR	9	Unmodified	_PELRKKSRR_					0	0	0		ENSG00000204560|ENST00000376442|DHX16	ENSG00000204560|ENST00000376442|DHX16	ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	585.3638916015625	2	585.364913	1168.71527	2.7241	0.0015946	-3.2509	-0.001903	-0.52683	-0.00030839	585.3631050744117	97.599	1.1009	97.544	97.187	98.288	-0.055542					64	25	3	0	0	0	0.78983	1	10566	10566		27.882	1.1893	1	488060			40362	8458	26888	26900	45918	45918					0.1376641188535359
PELSLGSY	8	Unmodified	_PELSLGSY_					0	0	0		ENSG00000176986|ENST00000345254|SEC24C;ENST00000505134.5_1_4:119681750-119687717:-|nuORF;ENST00000514418.1_1_4:119685902-119689400:-|nuORF;ENST00000514561.5_1_4:119681750-119745902:-|nuORF;ENSG00000150961|ENST00000280551|SEC24D;nc|ENSG00000150961|O94855-2|SEC24D	ENSG00000176986|ENST00000345254|SEC24C	ENSG00000176986|ENST00000345254|SEC24C	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.2557067871094	2	433.218726	864.422899	2.717	0.0011771	0.64548	0.00027963	3.3625	0.0014567	433.2195378165691	107.32	0.36465	107.29	107.19	107.55	-0.034134					9	8	2	0	0	0	0.4196	1	11900	11900		33.516	0	1	207030			40363	7112	26889	26901	45919	45919					-0.01473585639121211
PELSLILK	8	Unmodified	_PELSLILK_					0	0	0			REV__ENSG00000141002|ENST00000263346|TCF25	REV__ENSG00000141002|ENST00000263346|TCF25	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.77886962890625	2	456.791861	911.569169	-1.2977	-0.00059279	1.8184	0.00083065	0.52072	0.00023786	456.79248719361675	44.059	1.3347	44.509	43.477	44.812	0.45025					55	32	3	0	0	0	0.4196	1	3873	3873		10.866	0.6003	1	388170	+		40364	19655	26890	26902	45920	45920					0.1098471659677216
PELSLILK	8	Unmodified	_PELSLILK_					0	0	0			REV__ENSG00000141002|ENST00000263346|TCF25	REV__ENSG00000141002|ENST00000263346|TCF25	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	456.791861	911.569169	-1.4872	-0.00067935	1.9652	0.00089769	0.47798	0.00021834	456.79263594569886	43.829	1.6471	44.603	43.826	45.473	0.7738	0.046803	7.061E-05	NaN	10.866	71	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	471860	+		40365	19655	26890	26902							0.1098471659677216
PELSLTLTA	9	Unmodified	_PELSLTLTA_					0	0	0		ENSG00000113209|ENST00000231134|PCDHB5;ENSG00000113205|ENST00000231130|PCDHB3	ENSG00000113209|ENST00000231134|PCDHB5;ENSG00000113205|ENST00000231130|PCDHB3	ENSG00000113205|ENST00000231130|PCDHB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7669372558594	2	472.768583	943.522613	-0.41041	-0.00019403	-2.299	-0.0010869	-2.7094	-0.0012809	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.76255	1	8553	8553		35.618	5.1146	1	590200			40366	2703;2702	26891	26903	45921	45921					0.048592319748081536
PELSQHLDT	9	Unmodified	_PELSQHLDT_					0	0	0		nc|ENSG00000288591|Q9Y2I9|TBC1D30;nc|ENSG00000288591|Q9Y2I9-3|TBC1D30;nc|ENSG00000288591|Q9Y2I9-4|TBC1D30;ENSG00000111490|ENST00000539867|TBC1D30	nc|ENSG00000288591|Q9Y2I9|TBC1D30	nc|ENSG00000288591|Q9Y2I9|TBC1D30	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8018798828125	2	520.256371	1038.49819	0.64449	0.0003353	2.5316	0.0013171	3.1761	0.0016524	520.2574815319349	86.538	0.57206	86.981	86.731	87.303	0.44331					26	13	3	0	0	0	0.20789	1	10161	10161		39.253	7.298	1	294220			40367	15334	26892	26904	45922	45922					-0.019520281786981286
PELSRGRF	8	Unmodified	_PELSRGRF_					0	0	0			REV__ENST00000518895.1_1_8:621845-621914:-|nuORF	REV__ENST00000518895.1_1_8:621845-621914:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.26922607421875	2	481.264333	960.514114	-0.22683	-0.00010917	3.4592	0.0016648	3.2324	0.0015556	481.26595108166003	31.627	0.53519	31.576	31.337	31.872	-0.051031					18	11	2	0	0	0	0.87064	1	1803	1803		29.15	0.89528	1	40642	+		40368	28069	26893	26905	45923	45923					0.03227722848862413
PELSSWTH	8	Unmodified	_PELSSWTH_					0	0	0			REV__ENSG00000109323|ENST00000647097|MANBA	REV__ENSG00000109323|ENST00000647097|MANBA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.72503662109375	2	478.727249	955.439946	-0.85782	-0.00041066	-2.9047	-0.0013906	-3.7625	-0.0018012	478.72564528645705	29.835	0.48126	29.819	29.601	30.082	-0.015167					16	10	2	0	0	0	0.93529	1	1528	1528		52.299	7.7681	1	47489	+		40369	17755	26894	26906	45924	45924					-0.03955665033333844
PELTKKNFL	9	Unmodified	_PELTKKNFL_					0	0	0			REV__ENST00000370765.10_1_6:56483328-56483529:-|nuORF	REV__ENST00000370765.10_1_6:56483328-56483529:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.31689453125	2	545.318774	1088.623	-0.33878	-0.00018475	-2.7129	-0.0014794	-3.0517	-0.0016641	545.3170953984753	102.68	0.92177	102.69	102.27	103.19	0.0082092					56	22	4	0	0	0	0.7932	1	11006	11006		23.042	0	1	978870	+		40370	25663	26895	26907	45925	45925					0.08222889028479585
PELVGGNK	8	Unmodified	_PELVGGNK_					0	0	0			REV__ENST00000592670.5_1_17:40911856-40912668:-|nuORF	REV__ENST00000592670.5_1_17:40911856-40912668:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.2669372558594	2	407.226885	812.439217	0.63998	0.00026062	1.3108	0.00053379	1.9508	0.0007944	407.22746091136037	27.254	0.22245	27.079	26.971	27.193	-0.17559					6	4	2	0	0	0	0.4196	1	1560	1560		34.173	17.699	1	10501	+		40371	29168	26896	26908	45926	45926					0.02549540317636456
PELVKSLFV	9	Unmodified	_PELVKSLFV_					0	0	0			REV__nc|ENSG00000145321|P02774-2|GC	REV__nc|ENSG00000145321|P02774-2|GC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3148193359375	2	516.310418	1030.60628	3.1012	0.0016012	3.8274	0.0019761	6.9286	0.0035773	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.7932	1	12858	12858		24.203	1.1603	1	1162600	+		40372	19937	26897	26909	45927	45927					0.0922038814253483
PELVTLQLI	9	Unmodified	_PELVTLQLI_					0	0	0			REV__ENSG00000101825|ENST00000217939|MXRA5	REV__ENSG00000101825|ENST00000217939|MXRA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3172607421875	2	513.3157	1024.61685	-0.40505	-0.00020792	2.0459	0.0010502	1.6408	0.00084226	513.3166290585863	43.201	1.1169	43.206	42.933	44.05	0.0057487					65	27	3	0	0	0	0.7932	1	2969	2969		24.203	6.8378	1	350060	+		40373	17304	26898	26910	45928	45928					0.10552370796972355
PELYWCSE	8	Unmodified	_PELYWCSE_					0	0	0			REV__ENST00000603864.5_1_12:51663146-51663326:-|nuORF	REV__ENST00000603864.5_1_12:51663146-51663326:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.2188110351562	2	513.715493	1025.41643	-0.61812	-0.00031754	-3.3346	-0.0017131	-3.9528	-0.0020306	513.7137311619529	30.866	2.1418	30.945	29.884	32.026	0.079834					71	48	2	0	0	0	0.4196	1	1949	1949		35.201	24.935	1	113380	+		40374	29349	26899	26911	45929	45929					-0.0952584686215232
PEMINSQRR	9	Unmodified	_PEMINSQRR_					0	0	0		ENST00000502001.2_1_5:8457797-8460089:+|nuORF	ENST00000502001.2_1_5:8457797-8460089:+|nuORF	ENST00000502001.2_1_5:8457797-8460089:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	565.789794921875	2	565.790389	1129.56623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.825	1	68.825	68.325	69.325	0								0	0	0	0.28386	1	6120	6120		37.159	0	1				40375	12848	26900	26912	45930	45930					0.006625182003062946
PENFELVKKF	10	Unmodified	_PENFELVKKF_					0	0	0		ENSG00000162510|ENST00000373765|MATN1	ENSG00000162510|ENST00000373765|MATN1	ENSG00000162510|ENST00000373765|MATN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.8461303710938	2	625.842613	1249.67067	2.3174	0.0014503	3.4833	0.00218	5.8007	0.0036304	625.8447283404247	36.074	0.64915	36.514	36.222	36.871	0.44043					51	15	4	0	0	0	0.35939	2	2830	2819;2830		67.494	12.41	1	2038600			40376	5695	26901	26913	45931;45932	45932					0.05582543228638315
PENWGATG	8	Unmodified	_PENWGATG_					0	0	0			REV__ENSG00000117148|ENST00000375406|ACTL8	REV__ENSG00000117148|ENST00000375406|ACTL8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.2442321777344	2	416.185217	830.355882	4.6413	0.0019316	3.7324	0.0015534	8.3737	0.003485	416.18634717327706	107.35	0.24854	107.47	107.26	107.51	0.12249					12	8	3	0	0	0	0.4196	1	13121	13121		10.866	0	1	118540	+		40377	18248	26902	26914	45933	45933					-0.06608196130230226
PEPAHACT	8	Unmodified	_PEPAHACT_					0	0	0		ENST00000406961.5_1_2:24974995-24981018:+|nuORF	ENST00000406961.5_1_2:24974995-24981018:+|nuORF	ENST00000406961.5_1_2:24974995-24981018:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1832275390625	2	413.18162	824.348688	2.4158	0.00099815	-0.090388	-3.7347E-05	2.3254	0.0009608	413.18190794566056	101.46	1.3715	101.76	101.48	102.86	0.2999					93	36	5	0	0	0	0.884	1	12327	12327		33.516	3.674	1	7829900			40378	11280	26903	26915	45934	45934					-0.07051252002315778
PEPAHACT	8	Unmodified	_PEPAHACT_					0	0	0		ENST00000406961.5_1_2:24974995-24981018:+|nuORF	ENST00000406961.5_1_2:24974995-24981018:+|nuORF	ENST00000406961.5_1_2:24974995-24981018:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1831359863281	2	413.18162	824.348688	2.5483	0.0010529	-0.24162	-9.9834E-05	2.3067	0.00095308	413.181828123707	101.42	1.3935	101.74	101.44	102.84	0.3251					104	36	4	0	0	0	0.91005	1	12385	12385		42.474	5.446	1	7436900			40379	11280	26903	26915	45935	45935					-0.07051252002315778
PEPAPAEKP	9	Unmodified	_PEPAPAEKP_					0	0	0			REV__ENSG00000070729|ENST00000251102|CNGB1	REV__ENSG00000070729|ENST00000251102|CNGB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2449645996094	2	468.245275	934.475997	0.29201	0.00013673	-0.21451	-0.00010045	0.0775	3.6289E-05	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.51307	1	3588	3588		51.335	0	1	7645500	+		40380	16609	26904	26916	45936	45936					0.006137921435083626
PEPAPGTPGL	10	Unmodified	_PEPAPGTPGL_					0	0	0		nc|ENSG00000160117|Q8NAG6-1|ANKLE1;ENSG00000160117|ENST00000404085|ANKLE1;ENST00000404085.5_1_19:17392508-17397358:+|nuORF	nc|ENSG00000160117|Q8NAG6-1|ANKLE1	nc|ENSG00000160117|Q8NAG6-1|ANKLE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.2449951171875	2	468.245275	934.475997	-1.0647	-0.00049855	0.99639	0.00046656	-0.06832	-3.199E-05	468.2456241225619	47.383	3.6723	47.402	45.915	49.587	0.018967					223	102	4	0	0	0	0.4094	1	3568	3568		63.306	0.32785	1	7165000			40381	5555	26905	26917	45937	45937					0.006137921435083626
PEPCASAH	8	Unmodified	_PEPCASAH_					0	0	0		ENST00000511041.1_1_4:129077185-129077356:+|nuORF;nc|ENSG00000175592|P15407-2|FOSL1;ENSG00000175592|ENST00000312562|FOSL1	ENST00000511041.1_1_4:129077185-129077356:+|nuORF	ENST00000511041.1_1_4:129077185-129077356:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.17498779296875	2	406.173795	810.333038	2.4719	0.001004	1.6254	0.00066021	4.0973	0.0016642	406.17475072554515	96.427	1.6527	96.832	96.34	97.993	0.40498					89	39	4	0	0	0	0.9159	1	11588	11588		44.531	12.576	1	1443200			40382	7026	26906	26918	45938	45938					-0.07971538519370824
PEPCASAH	8	Unmodified	_PEPCASAH_					0	0	0		ENST00000511041.1_1_4:129077185-129077356:+|nuORF;nc|ENSG00000175592|P15407-2|FOSL1;ENSG00000175592|ENST00000312562|FOSL1	ENST00000511041.1_1_4:129077185-129077356:+|nuORF	ENST00000511041.1_1_4:129077185-129077356:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.1762390136719	2	406.173795	810.333038	0.71022	0.00028847	3.9683	0.0016118	4.6785	0.0019003	406.1754560618925	96.49	1.6931	96.894	96.458	98.151	0.40451					82	40	3	0	0	0	0.89457	1	11596	11596		37.028	0	1	1730200			40383	7026	26906	26918	45939	45939					-0.07971538519370824
PEPCTDTF	8	Unmodified	_PEPCTDTF_					0	0	0			REV__nc|ENSG00000076944|Q15833-3|STXBP2	REV__nc|ENSG00000076944|Q15833-3|STXBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.18646240234375	2	455.186568	908.358584	0.65959	0.00030024	3.5209	0.0016026	4.1805	0.0019029	455.1880843326598	25.182	1.1689	25.145	24.668	25.837	-0.037178					47	31	3	0	0	0	0.85277	1	963	963		25.45	1.2474	1	59550	+		40384	29713	26907	26919	45940	45940					-0.09926108787601606
PEPEKAPPA	9	Unmodified	_PEPEKAPPA_					0	0	0		ENSG00000184922|ENST00000331495|FMNL1;nc|ENSG00000184922|O95466-2|FMNL1;nc|ENSG00000184922|O95466-3|FMNL1;ENST00000587856.1_1_17:43318772-43319102:+|nuORF	ENSG00000184922|ENST00000331495|FMNL1	ENSG00000184922|ENST00000331495|FMNL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.24432373046875	2	468.245275	934.475997	-1.0647	-0.00049855	0.99639	0.00046656	-0.06832	-3.199E-05	468.2456241225619	47.383	3.6723	47.402	45.915	49.587	0.018967					223	102	4	0	0	0	0.76255	1	3662	3662		35.618	0	1	7165000			40385	7654	26908	26920	45941	45941					0.006137921435083626
PEPEPQRGL	9	Unmodified	_PEPEPQRGL_					0	0	0			REV__ENST00000578237.5_1_17:15554991-15580556:-|nuORF	REV__ENST00000578237.5_1_17:15554991-15580556:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.76544189453125	2	511.766906	1021.51926	0.2526	0.00012927	-1.2483	-0.00063885	-0.99573	-0.00050958	511.76673327052123	30.992	0.57183	31.01	30.813	31.384	0.01836					15	13	2	0	0	0	0.78983	1	1642	1642		27.882	1.1893	1	32079	+		40386	29023	26909	26921	45942	45942					0.009359819208043518
PEPGRCLY	8	Unmodified	_PEPGRCLY_					0	0	0			REV__ENST00000599599.5_2_19:57106675-57112942:+|nuORF	REV__ENST00000599599.5_2_19:57106675-57112942:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7251892089844	2	467.726195	933.437837	-0.42719	-0.00019981	-1.025	-0.00047944	-1.4522	-0.00067925	467.7255891805631	62.298	1.2977	62.853	62.3	63.598	0.55449					73	29	4	0	0	0	0.87276	1	6676	6676		29.842	0	1	594040	+		40387	29300	26910	26922	45943	45943					-0.03154417042799196
PEPLLHRL	8	Unmodified	_PEPLLHRL_					0	0	0			REV__ENST00000398495.6_1_18:47803541-47806282:-|nuORF	REV__ENST00000398495.6_1_18:47803541-47806282:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7903747558594	2	487.792727	973.5709	-0.71211	-0.00034736	-3.8761	-0.0018908	-4.5883	-0.0022381	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.90465	1	7830	7830		40.573	7.057	1	678280	+		40388	26207	26911	26923	45944	45944					0.08305770405377189
PEPPHRVL	8	Unmodified	_PEPPHRVL_					0	0	0		ENST00000529404.5_1_11:61643581-61643947:-|nuORF;ENST00000533676.5_1_11:61641288-61643947:-|nuORF	ENST00000529404.5_1_11:61643581-61643947:-|nuORF	ENST00000529404.5_1_11:61643581-61643947:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.76739501953125	2	472.769252	943.52395	-0.93003	-0.00043969	-3.4036	-0.0016091	-4.3336	-0.0020488	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.92457	1	8017	8017		47.916	9.1095	1	526610			40389	13322	26912	26924	45945	45945					0.04992910854230104
PEPPLPYEHM	10	Unmodified	_PEPPLPYEHM_					0	0	0			REV__ENSG00000185950|ENST00000375856|IRS2	REV__ENSG00000185950|ENST00000375856|IRS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.2858276367188	2	605.284074	1208.5536	0.98248	0.00059468	2.5271	0.0015296	3.5095	0.0021243	605.2852052046003	58.208	1.6782	58.295	57.834	59.512	0.087002					167	73	3	0	0	0	0.51401	1	4930	4930		42.396	6.7778	1	1590000	+		40390	22811	26913	26925	45946	45946					-0.04233937982621683
PEPPLPYEHM	10	Unmodified	_PEPPLPYEHM_					0	0	0			REV__ENSG00000185950|ENST00000375856|IRS2	REV__ENSG00000185950|ENST00000375856|IRS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.2855224609375	2	605.284074	1208.5536	-0.21892	-0.00013251	3.232	0.0019563	3.0131	0.0018238	605.285887959875	58.271	1.5426	58.263	57.785	59.328	-0.0074387					123	65	2	0	0	0	0.60985	3	4980	4953;4963;4980		44.117	21.559	1	1563500	+		40391	22811	26913	26925	45947;45948;45949	45949					-0.04233937982621683
PEPPNRAR	8	Unmodified	_PEPPNRAR_					0	0	0		ENST00000478253.5_1_3:58223324-58223504:+|nuORF	ENST00000478253.5_1_3:58223324-58223504:+|nuORF	ENST00000478253.5_1_3:58223324-58223504:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.7532653808594	2	468.754133	935.493713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.437	1	21.505	21.005	22.005	0.068251								0	0	0	0.29245	1	575	575		30.504	5.0535	1				40392	12381	26914	26926	45950	45950					0.023385521890304517
PEPQRPNW	8	Unmodified	_PEPQRPNW_					0	0	0		ENSG00000198842|ENST00000361200|STYXL2	ENSG00000198842|ENST00000361200|STYXL2	ENSG00000198842|ENST00000361200|STYXL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2540893554688	2	512.253966	1022.49338	-0.40094	-0.00020538	0.087759	4.4955E-05	-0.31318	-0.00016043	512.253883322564	54.419	1.295	54.474	54.011	55.305	0.055614					87	42	3	0	0	0	0.88915	1	4546	4546		35.201	1.0282	1	718970			40393	8351	26915	26927	45951	45951					-0.01696867530813506
PEPSESAPPL	10	Unmodified	_PEPSESAPPL_					0	0	0			REV__ENSG00000043591|ENST00000369295|ADRB1	REV__ENSG00000043591|ENST00000369295|ADRB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2530517578125	2	512.253297	1022.49204	-0.38169	-0.00019552	1.3498	0.00069142	0.96807	0.0004959	512.2538769688313	54.312	1.3388	54.263	53.816	55.154	-0.049274					65	39	2	0	0	0	0.53935	1	4534	4534		53.351	7.3995	1	691410	+		40394	16339	26916	26928	45952	45952					-0.018305464102354563
PEPSPSTSSAP	11	Unmodified	_PEPSPSTSSAP_					0	0	0			REV__ENSG00000095015|ENST00000399503|MAP3K1	REV__ENSG00000095015|ENST00000399503|MAP3K1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.7479858398438	2	528.745836	1055.47712	0.71577	0.00037846	3.9406	0.0020836	4.6564	0.002462	528.7477459912953	87.854	2.0553	88.004	87.511	89.567	0.14956					110	48	3	0	0	0	0.45916	1	8686	8686		54.776	6.8607	1	598410	+		40395	17051	26917	26929	45953	45953					-0.04840038278234715
PEPTGGGRT	9	Unmodified	_PEPTGGGRT_					0	0	0		ENST00000398125.5_1_4:2845618-2845750:+|nuORF	ENST00000398125.5_1_4:2845618-2845750:+|nuORF	ENST00000398125.5_1_4:2845618-2845750:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.2157287597656	2	436.217049	870.419545	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.252	1	18.622	18.122	19.122	-0.6296								0	0	0	0.30053	1	496	496		30.504	1.3541	1				40396	11178	26918	26930	45954	45954					-0.02084835693142395
PEPTITLGL	9	Unmodified	_PEPTITLGL_					0	0	0			REV__ENSG00000238083|ENST00000576629|LRRC37A2	REV__ENSG00000238083|ENST00000576629|LRRC37A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7691345214844	2	470.771126	939.527698	-0.0020308	-9.5605E-07	-4.2603	-0.0020056	-4.2624	-0.0020066	470.76898045127206	50.765	1.7665	50.763	50.349	52.115	-0.0020447					99	47	3	0	0	0	0.72402	1	4371	4371		38.806	6.8513	1	678630	+		40397	22141	26919	26931	45955	45955					0.05551535837423671
PEPTRYGD	8	Unmodified	_PEPTRYGD_					0	0	0		ENSG00000154079|ENST00000370474|SDHAF4	ENSG00000154079|ENST00000370474|SDHAF4	ENSG00000154079|ENST00000370474|SDHAF4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7157287597656	2	467.716882	933.41921	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.054	1	89.525	89.025	90.025	0.47068								0	0	0	0.3055	1	10543	10543		44.117	0	1				40398	5251	26920	26932	45956	45956					-0.05016255413011095
PEPTRYGD	8	Unmodified	_PEPTRYGD_					0	0	0		ENSG00000154079|ENST00000370474|SDHAF4	ENSG00000154079|ENST00000370474|SDHAF4	ENSG00000154079|ENST00000370474|SDHAF4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.71502685546875	2	467.716882	933.41921	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.224	1	89.695	89.195	90.195	0.47068								0	0	0	0.30305	1	10568	10568		42.396	4.5846	1				40399	5251	26920	26932	45957	45957					-0.05016255413011095
PEPTTETGH	9	Unmodified	_PEPTTETGH_					0	0	0		ENSG00000176681|ENST00000320254|LRRC37A;ENSG00000176809|ENST00000584306|LRRC37A3	ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.718505859375	2	484.719621	967.42469	1.0671	0.00051723	-3.9124	-0.0018964	-2.8453	-0.0013792	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.47272	1	11744	11744		53.351	12.573	1	7522200			40400	7094	26921	26933	45958	45958					-0.06032576621191765
PEQAGGAPPE	10	Unmodified	_PEQAGGAPPE_					0	0	0			REV__ENSG00000149256|ENST00000278550|TENM4	REV__ENSG00000149256|ENST00000278550|TENM4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.7209167480469	2	476.722164	951.429775	-2.36	-0.001125	-0.34494	-0.00016444	-2.7049	-0.0012895	476.72188156607797	89.101	0.90321	89.572	89.195	90.098	0.47068					46	21	3	0	0	0	0.8651	1	10567	10567		25.574	0	1	1072700	+		40401	20156	26922	26934	45959	45959					-0.04788272758582934
PEQCMLVPA	9	Unmodified	_PEQCMLVPA_					0	0	0			REV__ENST00000455577.6_1_15:40531336-40531564:+|nuORF	REV__ENST00000455577.6_1_15:40531336-40531564:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.2371520996094	2	494.235538	986.456524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.123	1	27.084	26.584	27.584	-0.038523								0	0	0	0.30053	1	1275	1275		30.504	6.3009	1		+		40402	26944	26923	26935	45960	45960					-0.03724623463244825
PEQEEKALL	9	Unmodified	_PEQEEKALL_					0	0	0		nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7835693359375	2	528.782222	1055.54989	1.4217	0.00075177	2.3451	0.00124	3.7668	0.0019918	528.7833369070402	97.808	1.4372	98.199	97.803	99.241	0.39037					99	34	4	0	0	0	0.77244	1	11781	11781		32.812	0	1	3659200			40403	687	26924	26936	45961	45961					0.024337155151897605
PEQGNAHI	8	Unmodified	_PEQGNAHI_					0	0	0		ENSG00000130224|ENST00000317135|LRCH2;nc|ENSG00000130224|Q5VUJ6-2|LRCH2	ENSG00000130224|ENST00000317135|LRCH2	ENSG00000130224|ENST00000317135|LRCH2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.2555847167969	2	433.211766	864.40898	2.3744	0.0010286	-1.0399	-0.00045051	1.3344	0.0005781	433.2117908564436	107.17	0.40403	107.21	106.98	107.39	0.035622					13	9	2	0	0	0	0.4196	1	11747	11747		50.025	0	1	183920			40404	3625	26925	26937	45962	45962					-0.028648183475752376
PEQKVKALLLV	11	Unmodified	_PEQKVKALLLV_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16;ENST00000380443.5_1_20:2843179-2847217:+|nuORF	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2664489746094	3	413.267463	1236.78056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.014	1	15.091	14.591	15.591	0.077959								0	0	0	0.56276	1	2	2		15.921	1.227	1				40405	8651	26926	26938	45963	45963					0.17163968567842858
PEQLCNGPAP	10	Unmodified	_PEQLCNGPAP_					0	0	0			REV__ENST00000602717.5_1_14:77743417-77745166:-|nuORF	REV__ENST00000602717.5_1_14:77743417-77745166:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.2394409179688	2	513.239667	1024.46478	0.021127	1.0843E-05	-3.9572	-0.002031	-3.9361	-0.0020202	513.2373683965097	53.265	0.70753	53.262	52.936	53.644	-0.0033035					27	18	2	0	0	0	0.74274	1	4651	4651		42.396	5.237	1	75983	+		40406	29335	26927	26939	45964	45964					-0.04647353222264883
PEQLCNGPAP	10	Unmodified	_PEQLCNGPAP_					0	0	0			REV__ENST00000602717.5_1_14:77743417-77745166:-|nuORF	REV__ENST00000602717.5_1_14:77743417-77745166:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.319091796875	2	513.239667	1024.46478	-0.338	-0.00017348	-4.0532	-0.0020803	-4.3912	-0.0022537	513.2375770814941	53.267	0.3501	53.205	53.049	53.399	-0.062065					13	9	2	0	0	0	0.37624	1	4361	4361		47.657	30.292	1	65003	+		40407	29335	26927	26939	45965	45965					-0.04647353222264883
PEQLVLTLL	9	Unmodified	_PEQLVLTLL_					0	0	0		nc|ENSG00000140009|Q92731-7|ESR2;nc|ENSG00000140009|Q92731-6|ESR2;nc|ENSG00000140009|Q92731-9|ESR2;nc|ENSG00000140009|Q92731-5|ESR2;nc|ENSG00000140009|Q92731-2|ESR2;nc|ENSG00000140009|Q92731-4|ESR2;ENSG00000140009|ENST00000341099|ESR2;ENST00000555483.5_1_14:64724128-64735531:-|nuORF;nc|ENSG00000140009|Q92731-3|ESR2;nc|ENSG00000140009|Q92731-8|ESR2	nc|ENSG00000140009|Q92731-7|ESR2	nc|ENSG00000140009|Q92731-7|ESR2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3175659179688	2	513.3157	1024.61685	-1.338	-0.00068682	3.7943	0.0019477	2.4563	0.0012608	513.317527909064	55.758	0.98328	55.758	55.175	56.159	0					47	26	3	0	0	0	0.67345	1	4732	4732		42.396	6.7778	1	140760			40408	4409	26928	26940	45966	45966					0.10552370796949617
PEQQETVLD	9	Unmodified	_PEQQETVLD_					0	0	0		ENST00000468472.1_1_3:52853923-52864679:-|nuORF;nc|ENSG00000055955|Q14624-4|ITIH4;nc|ENSG00000055955|Q14624-3|ITIH4;nc|ENSG00000055955|Q14624-2|ITIH4;ENSG00000055955|ENST00000266041|ITIH4	ENST00000468472.1_1_3:52853923-52864679:-|nuORF	ENST00000468472.1_1_3:52853923-52864679:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7840576171875	2	529.753661	1057.49277	1.4055	0.00074457	0.51573	0.00027321	1.9212	0.0010178	529.7536953999719	97.966	0.4932	98.343	98.123	98.616	0.37679					16	11	2	0	0	0	0.20789	1	11803	11803		27.882	8.7787	1	53505			40409	1032	26929	26941	45967	45967					-0.03367751761174986
PEQSELTWSR	10	Unmodified	_PEQSELTWSR_					0	0	0			REV__ENST00000564333.1_1_16:2487101-2487449:+|nuORF	REV__ENST00000564333.1_1_16:2487101-2487449:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.9202270507812	2	616.798934	1231.58332	1.1288	0.00069621	-0.75558	-0.00046604	0.37317	0.00023017	616.7980249576083	45.92	0.52224	45.936	45.631	46.154	0.015514					20	14	2	0	0	0	0.37624	1	3352	3352		40.778	16.259	1	114690	+		40410	28834	26930	26942	45968	45968					-0.023212827129327707
PEQTAPVP	8	Unmodified	_PEQTAPVP_					0	0	0			REV__ENSG00000187957|ENST00000341772|DNER	REV__ENSG00000187957|ENST00000341772|DNER	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.71826171875	2	419.718893	837.423233	-0.30679	-0.00012876	0.071293	2.9923E-05	-0.23549	-9.8841E-05	419.71878265740355	43.537	1.2327	43.487	43.018	44.25	-0.050308					64	29	3	0	0	0	0.89962	1	2976	2976		38.806	0	1	823700	+		40411	22964	26931	26943	45969	45969					-0.0019816591927792615
PEQVFQLVN	9	Unmodified	_PEQVFQLVN_					0	0	0			REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	537.28466796875	2	537.284931	1072.55531	-0.67288	-0.00036153	-3.2415	-0.0017416	-3.9144	-0.0021031	537.2831306117204	92.569	2.4692	92.569	91.59	94.059	0					139	56	3	0	0	0	0.78536	1	9028	9028		29.15	0	1	173400	+		40412	30308	26932	26944	45970	45970					0.021934390976639406
PEQVFQLVN	9	Unmodified	_PEQVFQLVN_					0	0	0			REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	537.284931	1072.55531	-0.67288	-0.00036153	-3.2415	-0.0017416	-3.9144	-0.0021031	537.2831306117204	92.569	2.4692	92.569	91.59	94.059	0	0.034637	0.00096911	NaN	29.15	139	56	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173400	+		40413	30308	26932	26944							0.021934390976639406
PEQVFQLVN	9	Unmodified	_PEQVFQLVN_					0	0	0			REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	537.284931	1072.55531	-0.12869	-6.9142E-05	-3.7826	-0.0020323	-3.9113	-0.0021015	537.2827975665255	92.547	2.9903	92.616	91.234	94.224	0.06987	0.081666	0.00038768	NaN	29.15	153	70	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	201420	+		40414	30308	26932	26944							0.021934390976639406
PEQVFQLVN	9	Unmodified	_PEQVFQLVN_					0	0	0			REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	537.284931	1072.55531	2.4277	0.0013044	-6.5263	-0.0035065	-4.0986	-0.0022021	537.2813955666618	92.617	2.4453	92.553	91.48	93.925	-0.06414	0.018398	-0.0025607	NaN	29.15	149	57	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	222880	+		40415	30308	26932	26944							0.021934390976639406
PEQVFQLVN	9	Unmodified	_PEQVFQLVN_					0	0	0			REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	537.284931	1072.55531	1.2455	0.00066919	-5.4778	-0.0029431	-4.2323	-0.002274	537.2820505676192	92.237	2.5331	92.283	91.261	93.794	0.045456	-0.25186	-0.001434	NaN	29.15	143	59	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254140	+		40416	30308	26932	26944							0.021934390976639406
PEQVFQLVN	9	Unmodified	_PEQVFQLVN_					0	0	0			REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	537.284931	1072.55531	0.0391	2.1008E-05	-3.9189	-0.0021056	-3.8798	-0.0020846	537.2827109664607	92.358	2.9674	92.58	91.103	94.07	0.22157	0.045038	0.0002412	NaN	29.15	144	70	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	228330	+		40417	30308	26932	26944							0.021934390976639406
PEQVFQLVN	9	Unmodified	_PEQVFQLVN_					0	0	0			REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	537.284931	1072.55531	0.76426	0.00041063	-4.785	-0.0025709	-4.0208	-0.0021603	537.2822809798213	92.473	2.6086	92.632	91.351	93.959	0.15875	0.097504	-0.00068954	NaN	29.15	158	61	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272830	+		40418	30308	26932	26944							0.021934390976639406
PEQVFQLVN	9	Unmodified	_PEQVFQLVN_					0	0	0			REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	REV__nc|ENSG00000293328|Q8N9T2|NKAPP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	537.284931	1072.55531	-1.4935	-0.00080246	-2.4404	-0.0013112	-3.9339	-0.0021136	537.283574847054	92.324	2.7044	92.509	91.324	94.028	0.18582	-0.025381	0.00183	NaN	29.15	131	63	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200550	+		40419	30308	26932	26944							0.021934390976639406
PERCAPAP	8	Unmodified	_PERCAPAP_					0	0	0			REV__ENST00000369836.8_1_1:110198802-110199018:+|nuORF	REV__ENST00000369836.8_1_1:110198802-110199018:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.7036437988281	2	420.705263	839.395972	-0.13037	-5.4849E-05	-3.2351	-0.001361	-3.3654	-0.0014159	420.70381677228994	36.025	0.72796	36.006	35.692	36.42	-0.018673					30	15	3	0	0	0	0.91005	1	2305	2305		42.474	3.6683	1	122880	+		40420	25632	26933	26945	45971	45971					-0.0301497273133009
PEREGYPPPP	10	Unmodified	_PEREGYPPPP_					0	0	0			REV__ENST00000237654.8_1_4:77996857-77997100:-|nuORF	REV__ENST00000237654.8_1_4:77996857-77997100:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.7771606445312	2	569.780013	1137.54547	-0.34656	-0.00019746	-3.0575	-0.0017421	-3.404	-0.0019396	569.7780779655194	23.853	0.60036	23.908	23.63	24.23	0.055487					40	15	3	0	0	0	0.50394	1	824	824		55.504	7.5886	1	132980	+		40421	24220	26934	26946	45972	45972					-0.017797489077111095
PERIKKVQKK	10	Unmodified	_PERIKKVQKK_					0	0	0			REV__ENST00000441149.6_1_9:130980552-131010310:+|nuORF	REV__ENST00000441149.6_1_9:130980552-131010310:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.9377746582031	3	418.60659	1252.79794	-0.022256	-9.3163E-06	-4.4541	-0.0018645	-4.4763	-0.0018738	418.6046851198204	49.071	2.7151	49.065	47.966	50.681	-0.0056381					104	63	2	0	0	0	0.86014	1	4190	4190		23.378	0	1	111610	+		40422	17639	26935	26947	45973	45973					0.18165308893503607
PERLRQALAVV	11	Unmodified	_PERLRQALAVV_					0	0	0		ENSG00000185215|ENST00000560869|TNFAIP2	ENSG00000185215|ENST00000560869|TNFAIP2	ENSG00000185215|ENST00000560869|TNFAIP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.9223937988281	3	417.922578	1250.7459	-0.96194	-0.00040202	0.30568	0.00012775	-0.65627	-0.00027427	417.922646807868	105.95	2.4445	105.95	105.29	107.73	0					194	56	4	0	0	0	0.77538	1	11037	11037		10.104	0	1	9358100			40423	7688	26936	26948	45974	45974					0.1305614547973164
PERLTTEGCV	10	Unmodified	_PERLTTEGCV_					0	0	0			REV__ENST00000427159.6_1_17:61904706-61904889:-|nuORF	REV__ENST00000427159.6_1_17:61904706-61904889:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.7705688476562	2	552.771331	1103.52811	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.549	1	42.549	42.049	43.049	0.00016785								0	0	0	0.45132	1	3213	3213		31.53	4.4825	1		+		40424	26555	26937	26949	45975	45975					-0.019514125050363873
PERLVPVSPL	10	Unmodified	_PERLVPVSPL_					0	0	0		ENSG00000124217|ENST00000244051|MOCS3	ENSG00000124217|ENST00000244051|MOCS3	ENSG00000124217|ENST00000244051|MOCS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8304443359375	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.77314	1	9466	9466		40.778	5.6261	1	5219600			40425	3319	26938	26950	45976	45976					0.10094577919812764
PERRPAGG	8	Unmodified	_PERRPAGG_					0	0	0			REV__nc|ENSG00000134046|Q9UBB5-3|MBD2	REV__nc|ENSG00000134046|Q9UBB5-3|MBD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2272644042969	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.89457	1	7339	7339		37.028	1.8278	1	419890	+		40426	19111	26939	26951	45977	45977					0.015265941262327942
PERRPAGG	8	Unmodified	_PERRPAGG_					0	0	0			REV__nc|ENSG00000134046|Q9UBB5-3|MBD2	REV__nc|ENSG00000134046|Q9UBB5-3|MBD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2277526855469	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.88915	1	7891	7891		35.201	3.2459	1	961790	+		40427	19111	26939	26951	45978	45978					0.015265941262327942
PERRPAGG	8	Unmodified	_PERRPAGG_					0	0	0			REV__nc|ENSG00000134046|Q9UBB5-3|MBD2	REV__nc|ENSG00000134046|Q9UBB5-3|MBD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.22772216796875	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.88915	1	7397	7397		35.201	8.4046	1	831720	+		40428	19111	26939	26951	45979	45979					0.015265941262327942
PERRQPPQR	9	Unmodified	_PERRQPPQR_					0	0	0		nc|ENSG00000134278|Q08AE8-4|SPIRE1;nc|ENSG00000134278|Q08AE8-3|SPIRE1;nc|ENSG00000134278|Q08AE8-5|SPIRE1;nc|ENSG00000134278|Q08AE8-2|SPIRE1;ENSG00000134278|ENST00000409402|SPIRE1	nc|ENSG00000134278|Q08AE8-4|SPIRE1	nc|ENSG00000134278|Q08AE8-4|SPIRE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.2508544921875	2	582.323245	1162.63194	0.74025	0.00043106	-2.3795	-0.0013856	-1.6392	-0.00095455	582.8224777079442	34.548	0.36668	34.881	34.721	35.088	0.33289					10	8	2	0	0	0	0.20789	1	2601	2601		44.377	20.854	1	85666			40429	3923	26940	26952	45980	45980					0.057126754375076416
PERRVLDS	8	Unmodified	_PERRVLDS_					0	0	0			REV__ENST00000354724.7_2_8:80676707-80676806:-|nuORF	REV__ENST00000354724.7_2_8:80676707-80676806:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.26666259765625	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.88944	2	8427	8222;8427		57.811	8.2752	1	1182200	+		40430	25361	26941	26953	45981;45982	45982					0.03315401640657001
PESALLIVLG	10	Unmodified	_PESALLIVLG_					0	0	0		nc|ENSG00000066230|P48764-2|SLC9A3;ENSG00000066230|ENST00000264938|SLC9A3	nc|ENSG00000066230|P48764-2|SLC9A3	nc|ENSG00000066230|P48764-2|SLC9A3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.30859375	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.326	1	44.334	43.834	44.834	0.0084534								0	0	0	0.45132	1	3118	3118		20.947	3.582	1				40431	1153	26942	26954	45983	45983					0.09632084279905939
PESDDEPE	8	Unmodified	_PESDDEPE_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	459.17236328125	2	459.17217	916.329786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.421	1	25.445	24.945	25.945	0.024021								0	0	0	0.3037	1	920	920		18.324	0	1		+		40432	18793	26943	26955	45984	45984					-0.13172554883033172
PESGPRGL	8	Unmodified	_PESGPRGL_					0	0	0		ENST00000318967.6_2_1:153700611-153701247:+|nuORF	ENST00000318967.6_2_1:153700611-153701247:+|nuORF	ENST00000318967.6_2_1:153700611-153701247:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.74896240234375	2	406.716685	811.418816	1.1158	0.0004538	-1.184	-0.00048155	-0.068232	-2.7751E-05	406.7163303037815	36.892	1.0292	36.903	36.121	37.15	0.011173					28	22	2	0	0	0	0.4196	1	2380	2380		23.042	0	1	47658			40433	10013	26944	26956	45985	45985					0.0055636965781786785
PESGPRGL	8	Unmodified	_PESGPRGL_					0	0	0		ENST00000318967.6_2_1:153700611-153701247:+|nuORF	ENST00000318967.6_2_1:153700611-153701247:+|nuORF	ENST00000318967.6_2_1:153700611-153701247:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.716685	811.418816	-0.94605	-0.00038478	0.8706	0.00035409	-0.075452	-3.0688E-05	406.71712827762417	36.911	0.9821	36.857	36.112	37.094	-0.053558	0.036403	0.00094876	NaN	10.866	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47421			40434	10013	26944	26956							0.0055636965781786785
PESGPRGL	8	Unmodified	_PESGPRGL_					0	0	0		ENST00000318967.6_2_1:153700611-153701247:+|nuORF	ENST00000318967.6_2_1:153700611-153701247:+|nuORF	ENST00000318967.6_2_1:153700611-153701247:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	406.716685	811.418816	1.5449	0.00062832	-1.3025	-0.00052975	0.24236	9.8574E-05	406.7161397423825	36.42	0.41972	36.702	36.429	36.849	0.28173	-0.11898	-0.00081892	NaN	10.866	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61725			40435	10013	26944	26956							0.0055636965781786785
PESKIQSF	8	Unmodified	_PESKIQSF_					0	0	0		nc|ENSG00000167705|Q96NA2-2|RILP;ENST00000570858.5_1_17:1549738-1551855:-|nuORF;ENSG00000167705|ENST00000301336|RILP	nc|ENSG00000167705|Q96NA2-2|RILP	nc|ENSG00000167705|Q96NA2-2|RILP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2430419921875	2	468.245275	934.475997	0.29201	0.00013673	-0.21451	-0.00010045	0.0775	3.6289E-05	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.89494	1	3697	3697		37.159	1.5408	1	7645500			40436	6319	26945	26957	45986	45986					0.006137921435197313
PESLGSSPGLL	11	Unmodified	_PESLGSSPGLL_					0	0	0		ENST00000438447.1_1_5:31983346-31983580:+|nuORF	ENST00000438447.1_1_5:31983346-31983580:+|nuORF	ENST00000438447.1_1_5:31983346-31983580:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7843017578125	2	528.782222	1055.54989	1.4217	0.00075177	2.3451	0.00124	3.7668	0.0019918	528.7833369070402	97.808	1.4372	98.199	97.803	99.241	0.39037					99	34	4	0	0	0	0.5603	1	11793	11793		47.657	6.8792	1	3659200			40437	11751	26946	26958	45987	45987					0.024337155151897605
PESRKESKNE	10	Unmodified	_PESRKESKNE_					0	0	0		nc|ENSG00000198363|Q12797-4|ASPH;nc|ENSG00000198363|Q12797-3|ASPH	nc|ENSG00000198363|Q12797-4|ASPH	nc|ENSG00000198363|Q12797-4|ASPH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.3067016601562	2	602.301841	1202.58913	0.11958	7.2026E-05	3.221	0.00194	3.3406	0.002012	602.3036475876663	75.05	1.0451	75.006	74.659	75.704	-0.043877					82	29	4	0	0	0	0.42393	1	7434	7434		62.107	3.3255	1	1186100			40438	15198	26947	26959	45988	45988					-0.004061842012106354
PESSFQKL	8	Unmodified	_PESSFQKL_					0	0	0		ENSG00000023318|ENST00000262455|ERP44	ENSG00000023318|ENST00000262455|ERP44	ENSG00000023318|ENST00000262455|ERP44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.2449035644531	2	468.245275	934.475997	-0.27928	-0.00013077	0.30581	0.00014319	0.026523	1.2419E-05	468.2452890208871	47.437	2.6016	47.349	46.711	49.313	-0.08765					186	72	4	0	0	0	0.9295	1	3637	3637		55.504	0	1	6668700			40439	857	26948	26960	45989	45989					0.006137921435311
PETAKIPL	8	Unmodified	_PETAKIPL_					0	0	0		nc|ENSG00000154556|O94875-10|SORBS2	nc|ENSG00000154556|O94875-10|SORBS2	nc|ENSG00000154556|O94875-10|SORBS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7607421875	2	434.760561	867.506569	0.15252	6.6311E-05	1.8637	0.00081025	2.0162	0.00087656	434.760660552279	87.036	1.2069	87.482	87.061	88.268	0.44628					53	28	4	0	0	0	0.87276	1	10295	10295		29.842	1.5873	1	1015900			40440	15004	26949	26961	45990	45990					0.06751570528570028
PETAVADADAP	11	Unmodified	_PETAVADADAP_					0	0	0			REV__nc|ENSG00000144824|Q86SQ0-2|PHLDB2	REV__nc|ENSG00000144824|Q86SQ0-2|PHLDB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.7481079101562	2	528.745836	1055.47712	0.71577	0.00037846	3.9406	0.0020836	4.6564	0.002462	528.7477459912953	87.854	2.0553	88.004	87.511	89.567	0.14956					110	48	3	0	0	0	0.5603	1	8723	8723		47.657	1.6851	1	598410	+		40441	19914	26950	26962	45991	45991					-0.048400382782574525
PETAVVVLI	9	Unmodified	_PETAVVVLI_					0	0	0			REV__nc|ENSG00000181109|Q8NH57|OR52P1	REV__nc|ENSG00000181109|Q8NH57|OR52P1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7891540527344	2	470.789318	939.564084	0.26544	0.00012497	2.2731	0.0010701	2.5385	0.0011951	470.7900478703474	44.332	1.0266	44.381	43.794	44.821	0.048996					40	24	2	0	0	0	0.7932	1	3116	3116		26.796	1.3459	1	109700	+		40442	30073	26951	26963	45992	45992					0.09188412734147278
PETFGDLL	8	Unmodified	_PETFGDLL_					0	0	0		ENSG00000147485|ENST00000356297|PXDNL;nc|ENSG00000147485|A1KZ92-2|PXDNL	ENSG00000147485|ENST00000356297|PXDNL	ENSG00000147485|ENST00000356297|PXDNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2265319824219	2	446.226551	890.438549	0.046982	2.0964E-05	2.7157	0.0012118	2.7627	0.0012328	446.2280688530593	66.689	1.2509	67.24	66.779	68.03	0.55071					82	36	3	0	0	0	0.89457	1	7357	7357		37.028	0	1	1009400			40443	4908	26952	26964	45993	45993					-0.01105299122082215
PETFGDLL	8	Unmodified	_PETFGDLL_					0	0	0		ENSG00000147485|ENST00000356297|PXDNL;nc|ENSG00000147485|A1KZ92-2|PXDNL	ENSG00000147485|ENST00000356297|PXDNL	ENSG00000147485|ENST00000356297|PXDNL	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	446.226551	890.438549	-0.096259	-4.2954E-05	2.6491	0.0011821	2.5528	0.0011391	446.22811430238283	66.942	1.4514	67.327	66.697	68.149	0.38515	0.04375	-3.0537E-05	NaN	37.028	78	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1115400			40444	4908	26952	26964							-0.01105299122082215
PETGPVIN	8	Unmodified	_PETGPVIN_					0	0	0		ENST00000461510.1_1_22:21346043-21346739:+|nuORF	ENST00000461510.1_1_22:21346043-21346739:+|nuORF	ENST00000461510.1_1_22:21346043-21346739:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2379150390625	2	413.718893	825.423233	-1.8317	-0.00075781	-1.4124	-0.00058435	-3.2441	-0.0013422	413.7183304107667	77.982	2.4323	78.109	77.423	79.855	0.12695					107	82	2	0	0	0	0.4196	1	7326	7326		15.642	0	1	76093			40445	12026	26953	26965	45994	45994					0.0035383408071538724
PETILRDGD	9	Unmodified	_PETILRDGD_					0	0	0			REV__ENSG00000249853|ENST00000312719|HS3ST5	REV__ENSG00000249853|ENST00000312719|HS3ST5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.280029296875	2	508.256371	1014.49819	1.4586	0.00074132	-0.37209	-0.00018912	1.0865	0.0005522	508.25533358388157	89.024	0.16874	88.952	88.837	89.005	-0.07238					5	3	2	0	0	0	0.20789	1	9282	9282		31.53	4.8369	1	17989	+		40446	23868	26954	26966	45995	45995					-0.008480281787115018
PETKVAQK	8	Unmodified	_PETKVAQK_					0	0	0			REV__nc|ENSG00000153113|P20810-2|CAST	REV__nc|ENSG00000153113|P20810-2|CAST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.76055908203125	2	450.761092	899.507631	-0.27582	-0.00012433	0.16068	7.243E-05	-0.11514	-5.19E-05	450.7610342456716	36.806	1.1162	37.088	36.638	37.755	0.28173					48	26	3	0	0	0	0.72312	1	2906	2906		66.429	0	1	572770	+		40447	20331	26955	26967	45996	45996					0.05385784897475787
PETLEARIKPR	11	Unmodified	_PETLEARIKPR_					0	0	0		ENST00000429218.5_2_22:38004867-38010214:+|nuORF	ENST00000429218.5_2_22:38004867-38010214:+|nuORF	ENST00000429218.5_2_22:38004867-38010214:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.25732421875	3	437.257738	1308.75138	2.1229	0.00092824	-3.14	-0.001373	-1.0171	-0.00044476	437.2563089738452	99.067	2.7047	99.115	98.232	100.94	0.048157					189	62	4	0	0	0	0.75457	1	10561	10561		21.032	1.0018	1	798600			40448	11604	26956	26968	45997	45997					0.10935824271541605
PETLEARIKPR	11	Unmodified	_PETLEARIKPR_					0	0	0		ENST00000429218.5_2_22:38004867-38010214:+|nuORF	ENST00000429218.5_2_22:38004867-38010214:+|nuORF	ENST00000429218.5_2_22:38004867-38010214:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2568054199219	3	437.257738	1308.75138	-1.4909	-0.0006519	0.61457	0.00026872	-0.87632	-0.00038318	437.257922541183	97.247	2.1693	97.478	96.225	98.394	0.23103					136	50	3	0	0	0	0.74771	1	10064	10064		22.562	0.87584	1	478050			40449	11604	26956	26968	45998	45998					0.10935824271541605
PETLPRRN	8	Unmodified	_PETLPRRN_					0	0	0			REV__ENSG00000163960|ENST00000296328|UBXN7	REV__ENSG00000163960|ENST00000296328|UBXN7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7763977050781	2	491.775065	981.535577	-0.25021	-0.00012305	2.9097	0.0014309	2.6595	0.0013079	491.77644489789066	71.355	1.1541	71.903	71.491	72.645	0.54756					59	27	4	0	0	0	0.88944	1	7966	7966		57.811	4.4598	1	610450	+		40450	21004	26957	26969	45999	45999					0.04407107877557337
PETLSKKTY	9	Unmodified	_PETLSKKTY_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-2|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.7927856445312	2	533.792589	1065.57063	-1.2748	-0.00068048	0.10631	5.6748E-05	-1.1685	-0.00062373	533.7925857860391	42.566	0.61313	43	42.765	43.378	0.4334					31	14	3	0	0	0	0.065196	1	3797	3797		101.6	16.685	1	826210			40451	5938	26958	26970	46000	46000					0.04046305894848956
PETRNILES	9	Unmodified	_PETRNILES_					0	0	0			REV__ENST00000490579.1_1_3:183995094-184008674:+|nuORF	REV__ENST00000490579.1_1_3:183995094-184008674:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.79296875	2	529.77747	1057.54039	1.5976	0.00084638	-1.6055	-0.00085058	-0.0079201	-4.1959E-06	529.7761555420101	36.169	0.46065	36.61	36.451	36.912	0.44043					15	10	2	0	0	0	0.20789	1	2825	2825		19.104	0	1	34129	+		40452	19929	26959	26971	46001	46001					0.01391947229649304
PETSPRFKTG	10	Unmodified	_PETSPRFKTG_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3404541015625	2	560.293288	1118.57202	0.39642	0.00022211	1.2832	0.00071894	1.6796	0.00094106	560.2946373110426	101.93	0.20294	102.12	101.97	102.18	0.19483					7	4	3	0	0	0	0.37624	1	10698	10698		37.812	9.73	1	179360			40453	7373	26960	26972	46002	46002					0.017479399836020093
PETSPSPTGVA	11	Unmodified	_PETSPSPTGVA_					0	0	0			REV__ENST00000571051.5_1_17:78187969-78194112:-|nuORF	REV__ENST00000571051.5_1_17:78187969-78194112:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.7686157226562	2	521.756204	1041.49785	0.15949	8.3214E-05	3.4424	0.0017961	3.6019	0.0018793	521.7577178466619	82.708	0.78244	83.182	82.878	83.66	0.47383					27	18	3	0	0	0	0.17478	1	9636	9636		19.104	0.77911	1	205170	+		40454	28931	26961	26973	46003	46003					-0.02123447898543418
PETSVKEI	8	Unmodified	_PETSVKEI_					0	0	0		nc|ENSG00000163687|Q13609-2|DNASE1L3;ENSG00000163687|ENST00000394549|DNASE1L3	nc|ENSG00000163687|Q13609-2|DNASE1L3	nc|ENSG00000163687|Q13609-2|DNASE1L3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.74627685546875	2	451.745108	901.475663	-1.3354	-0.00060327	3.1446	0.0014206	1.8092	0.00081728	451.74648679752744	34.552	0.77399	34.59	34.166	34.94	0.038643					54	31	2	0	0	0	0.87922	1	1763	1763		31.955	5.1588	1	190450			40455	5852	26962	26974	46004	46004					0.020983724236884882
PETVLIDLI	9	Unmodified	_PETVLIDLI_					0	0	0		nc|ENSG00000160551|Q7L7X3-2|TAOK1;ENST00000577583.1_1_17:27807410-27838022:+|nuORF;nc|ENSG00000160551|Q7L7X3-3|TAOK1;ENSG00000160551|ENST00000261716|TAOK1	nc|ENSG00000160551|Q7L7X3-2|TAOK1	nc|ENSG00000160551|Q7L7X3-2|TAOK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.7997741699219	2	506.799883	1011.58521	-0.34654	-0.00017563	2.8122	0.0014252	2.4657	0.0012496	506.8012475613855	52.837	1.9821	52.763	52.142	54.124	-0.074509					82	54	2	0	0	0	0.7932	1	4273	4273		21.96	0	1	214150			40456	5593	26963	26975	46005	46005					0.07988378043023658
PETVLVLLG	9	Unmodified	_PETVLVLLG_					0	0	0		ENST00000556919.1_1_14:69150236-69150377:-|nuORF	ENST00000556919.1_1_14:69150236-69150377:-|nuORF	ENST00000556919.1_1_14:69150236-69150377:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7891540527344	2	470.789318	939.564084	0.22344	0.00010519	1.5773	0.00074259	1.8008	0.00084778	470.78980973205034	44.363	1.3298	44.34	43.809	45.139	-0.023079					53	30	2	0	0	0	0.77546	1	3410	3410		31.955	6.5047	1	151650			40457	13760	26964	26976	46006	46006					0.09188412734158646
PEVAPPTRPR	10	Unmodified	_PEVAPPTRPR_					0	0	0		nc|ENSG00000162931|Q9Y577-2|TRIM17;ENSG00000162931|ENST00000366698|TRIM17	nc|ENSG00000162931|Q9Y577-2|TRIM17	nc|ENSG00000162931|Q9Y577-2|TRIM17	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.340087890625	2	560.317097	1118.61964	3.1452	0.0017623	3.1146	0.0017452	6.2598	0.0035075	560.3170504620325	102.64	0.41644	102.59	102.45	102.87	-0.047005					15	9	2	0	0	0	0.37624	1	11211	11211		35.152	7.2698	1	223030			40458	5751	26965	26977	46007	46007					0.06507638974449037
PEVDGFVKDM	10	Unmodified	_PEVDGFVKDM_					0	0	0		ENSG00000079689|ENST00000377961|SCGN	ENSG00000079689|ENST00000377961|SCGN	ENSG00000079689|ENST00000377961|SCGN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8536376953125	2	568.768257	1135.52196	-1.1678	-0.00066424	1.7667	0.0010048	0.59883	0.0003406	568.7694837623123	102.36	0.24049	102.38	102.2	102.44	0.01989					6	5	2	0	0	0	0.37624	1	10939	10939		45.972	10.354	1	74760			40459	1425	26966	26978	46008	46008					-0.040379307365356
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	423.5973205566406	3	423.598094	1267.77245	-0.96194	-0.00040747	0.13168	5.5777E-05	-0.83026	-0.0003517	423.59805160624353	105.99	2.401	105.99	105.33	107.73	0					158	55	4	0	0	0	0.8486	3	10924	10924;10971;10983		29.551	2.801	1	1845700	+		40460	22163	26967	26979	46009;46010;46011	46009					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8930053710938	2	634.893503	1267.77245	-0.0069402	-4.4063E-06	-1.6425	-0.0010428	-1.6494	-0.0010472	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.67571	1	11077	11077		45.972	3.5761	1	31286000	+		40461	22163	26967	26979	46012	46012					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	423.5977783203125	3	423.598094	1267.77245	-0.18424	-7.8043E-05	-0.80349	-0.00034036	-0.98773	-0.0004184	423.5976787176537	105.93	2.5264	105.91	105.23	107.75	-0.025146					222	59	5	0	0	0	0.76096	6	11494	11435;11458;11494;11518;11544;11611		38.714	14.983	1	5735600	+		40462	22163	26967	26979	46013;46014;46015;46016;46017;46018	46015					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8928833007812	2	634.893503	1267.77245	-0.13084	-8.307E-05	-1.4622	-0.00092832	-1.593	-0.0010114	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.73395	2	11493	11493;11603		42.864	6.4175	1	40768000	+		40463	22163	26967	26979	46019;46020	46019					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	423.5976257324219	3	423.598094	1267.77245	2.7179	0.0011513	-3.8029	-0.0016109	-1.0849	-0.00045958	423.5963997730453	105.86	2.6165	105.82	105.15	107.76	-0.037148					224	61	5	0	0	0	0.73395	3	11715	11691;11715;11740		33.039	12.047	1	6994400	+		40464	22163	26967	26979	46021;46022;46023	46022					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5976867675781	3	423.598094	1267.77245	2.8995	0.0012282	-3.9608	-0.0016778	-1.0614	-0.0004496	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.86272	1	11493	11493		23.378	3.0629	1	6928400	+		40465	22163	26967	26979	46024	46024					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8928833007812	2	634.893503	1267.77245	1.3476	0.00085558	-2.8123	-0.0017855	-1.4647	-0.0009299	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.8545	1	11585	11585		36.447	4.9169	1	42647000	+		40466	22163	26967	26979	46025	46025					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	423.597900390625	3	423.598094	1267.77245	-1.7147	-0.00072636	0.62535	0.0002649	-1.0894	-0.00046147	423.5982725309242	105.5	3.0222	105.66	104.96	107.98	0.15925					250	75	5	0	0	0	0.82886	5	11326	11182;11230;11289;11314;11326		28.577	6.4347	1	8925200	+		40467	22163	26967	26979	46026;46027;46028;46029;46030	46030					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8924560546875	2	634.893503	1267.77245	1.4999	0.00095225	-3.3387	-0.0021197	-1.8389	-0.0011675	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.70553	1	11262	11262		44.377	3.599	1	68597000	+		40468	22163	26967	26979	46031	46031					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.59759521484375	3	423.598094	1267.77245	0.73411	0.00031097	-1.8552	-0.00078587	-1.1211	-0.00047491	423.59723125055814	105.63	2.8345	105.73	105.02	107.86	0.10765					213	69	5	0	0	0	0.78666	6	11279	11255;11267;11279;11291;11303;11317		31.068	11.114	1	8035700	+		40469	22163	26967	26979	46032;46033;46034;46035;46036;46037	46034					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8926391601562	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.70553	3	11175	11175;11272;11429		44.377	16.495	1	66671000	+		40470	22163	26967	26979	46038;46039;46040	46038					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	423.5975646972656	3	423.598094	1267.77245	-1.87	-0.00079214	0.80292	0.00034011	-1.0671	-0.00045203	423.59834897722675	105.64	2.006	105.71	105.05	107.06	0.073112					176	48	5	0	0	0	0.82886	4	11241	11194;11217;11229;11241		35.178	10.11	1	4588600	+		40471	22163	26967	26979	46041;46042;46043;46044	46044					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.893798828125	2	634.893503	1267.77245	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.42	1	107.45	106.95	107.95	0.036125								0	0	0	0.45132	1	11464	11464		37.812	7.4938	1		+		40472	22163	26967	26979	46045	46045					0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	423.598094	1267.77245	2.1603	0.00091508	-3.1576	-0.0013376	-0.9974	-0.0004225	423.5967091939385	105.45	1.3353	105.6	104.99	106.33	0.15584	-0.15534	-0.0021557	NaN	33.039	74	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86799	+		40473	22163	26967	26979							0.1492783437106482
PEVDKKLRKR	10	Unmodified	_PEVDKKLRKR_					0	0	0			REV__ENSG00000176946|ENST00000407315|THAP4	REV__ENSG00000176946|ENST00000407315|THAP4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	423.598094	1267.77245	4.0974	0.0017356	-5.0536	-0.0021407	-0.95623	-0.00040506	423.59579304185957	105.44	1.448	105.63	105.01	106.46	0.18648	-0.13255	-0.0045651	NaN	33.039	79	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	131860	+		40474	22163	26967	26979							0.1492783437106482
PEVFTQCTRY	10	Unmodified	_PEVFTQCTRY_					0	0	0		ENSG00000116783|ENST00000326637|TNNI3K;nc|ENSG00000116783|Q59H18-4|TNNI3K;nc|ENSG00000116783|Q59H18-1|TNNI3K	ENSG00000116783|ENST00000326637|TNNI3K	ENSG00000116783|ENST00000326637|TNNI3K	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.2991333007812	2	622.29243	1242.57031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.837	1	23.794	23.294	24.294	-0.043221								0	0	0	0.45132	1	818	818		25.574	0	1				40475	2947	26968	26980	46046	46046					-0.04127437096644826
PEVGGLYLLTH	11	Unmodified	_PEVGGLYLLTH_					0	0	0			REV__ENSG00000142798|ENST00000374695|HSPG2	REV__ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2208557128906	3	400.220401	1197.63937	-0.15912	-6.3683E-05	1.9182	0.00076771	1.7591	0.00070403	400.22103550514197	20.905	0.85526	20.277	20.031	20.887	-0.62835					47	21	3	0	0	0	0.61824	1	714	714		42.338	9.5257	1	362440	+		40476	19756	26969	26981	46047	46047					0.04845970194560323
PEVKIVAL	8	Unmodified	_PEVKIVAL_					0	0	0			REV__nc|ENSG00000290649|Q8NH63|OR51H1	REV__nc|ENSG00000290649|Q8NH63|OR51H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77996826171875	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.884	1	3095	3095		33.516	3.0119	1	1177900	+		40477	30295	26970	26982	46048	46048					0.10388447425293634
PEVKIVAL	8	Unmodified	_PEVKIVAL_					0	0	0			REV__nc|ENSG00000290649|Q8NH63|OR51H1	REV__nc|ENSG00000290649|Q8NH63|OR51H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801208496094	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.93529	1	2539	2539		52.299	0	1	8013100	+		40478	30295	26970	26982	46049	46049					0.10388447425293634
PEVKIVELV	9	Unmodified	_PEVKIVELV_					0	0	0		nc|ENSG00000132849|Q8NI35|PATJ;ENSG00000132849|ENST00000642238|PATJ;nc|ENSG00000132849|Q8NI35-4|PATJ;ENST00000459752.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-3|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ	nc|ENSG00000132849|Q8NI35|PATJ	nc|ENSG00000132849|Q8NI35|PATJ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.31591796875	2	513.3157	1024.61685	-1.7271	-0.00088655	3.144	0.0016138	1.4168	0.00072729	513.3171524632667	41.711	0.92437	42.125	41.86	42.784	0.4139					63	23	4	0	0	0	0.7932	1	3689	3689		21.96	1.4781	1	2398900			40479	3834	26971	26983	46050	46050					0.10552370796949617
PEVKQVLHI	9	Unmodified	_PEVKQVLHI_					0	0	0		ENST00000469908.5_2_16:2429513-2445843:+|nuORF	ENST00000469908.5_2_16:2429513-2445843:+|nuORF	ENST00000469908.5_2_16:2429513-2445843:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8167114257812	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.69914	1	8483	8483		40.573	1.7665	1	1159800			40480	12211	26972	26984	46051	46051					0.09498308748334239
PEVKQVLHI	9	Unmodified	_PEVKQVLHI_					0	0	0		ENST00000469908.5_2_16:2429513-2445843:+|nuORF	ENST00000469908.5_2_16:2429513-2445843:+|nuORF	ENST00000469908.5_2_16:2429513-2445843:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.816650390625	2	531.818941	1061.62333	-0.69524	-0.00036974	-3.1977	-0.0017006	-3.8929	-0.0020703	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.74721	1	10159	10159		37.159	1.9584	1	1296000			40481	12211	26972	26984	46052	46052					0.09498308748334239
PEVLAVIA	8	Unmodified	_PEVLAVIA_					0	0	0		ENSG00000176641|ENST00000312828|RNF152	ENSG00000176641|ENST00000312828|RNF152	ENSG00000176641|ENST00000312828|RNF152	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2481994628906	2	406.249829	810.485105	-0.18598	-7.5555E-05	-2.5531	-0.0010372	-2.7391	-0.0011128	406.2487203598378	111.64	0.79961	111.58	111.26	112.06	-0.059937					46	25	2	0	0	0	0.82464	1	12155	12155		21.702	0	1	69533			40482	7092	26973	26985	46053	46053					0.07228185499843676
PEVLDESLN	9	Unmodified	_PEVLDESLN_					0	0	0		ENST00000403332.2_1_6:129478670-129479855:-|nuORF;ENSG00000107779|ENST00000372037|BMPR1A;ENSG00000138696|ENST00000515059|BMPR1B;nc|ENSG00000138696|O00238-2|BMPR1B	ENST00000403332.2_1_6:129478670-129479855:-|nuORF;ENSG00000138696|ENST00000515059|BMPR1B	ENST00000403332.2_1_6:129478670-129479855:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3782958984375	2	508.250754	1014.48696	0.48861	0.00024833	-2.0563	-0.0010451	-1.5677	-0.00079677	508.2504094389343	69.327	0.34292	69.874	69.66	70.003	0.54693					12	8	3	0	0	0	0.20789	1	7684	7684		20.947	0	1	104900			40483	2368;4319	26974	26986	46054	46054					-0.019708502728462918
PEVNCSMAQI	10	Carbamidomethyl (C)	_PEVNC(Carbamidomethyl (C))SMAQI_	PEVNC(1)SMAQI		PEVNC(55)SMAQI		0	1	0		nc|ENSG00000000971|P08603|CFH;ENSG00000000971|ENST00000367429|CFH;ENST00000466229.5_1_1:196648727-196709933:+|nuORF	nc|ENSG00000000971|P08603|CFH	nc|ENSG00000000971|P08603|CFH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.7568969726562	2	574.757366	1147.50018	0.44449	0.00025548	-1.3113	-0.00075367	-0.86679	-0.00049819	574.7564893349348	32.159	0.73095	32.266	31.973	32.704	0.10707					44	16	4	0	0	0	0.51302	1	2240	2240		54.776	10.399	1	702070			40484	647	26975	26987	46055	46055	5				-0.06767058756781807
PEVQGSTKSAY	11	Unmodified	_PEVQGSTKSAY_					0	0	0		ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.7893676757812	2	583.788035	1165.56152	-0.81056	-0.00047319	1.0374	0.00060561	0.22681	0.00013241	583.7884299477995	68.187	0.58757	68.209	67.93	68.517	0.021599					66	27	3	0	0	0	0.57736	1	6410	6410		46.457	6.3986	1	469790			40485	3562	26976	26988	46056	46056					-0.014640874614542554
PEVREPLSL	9	Unmodified	_PEVREPLSL_					0	0	0			REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.2864990234375	2	520.292756	1038.57096	-0.32923	-0.0001713	0.1974	0.00010271	-0.13183	-6.8589E-05	520.2926887872011	53.999	0.79483	54.584	54.164	54.959	0.58474					49	18	3	0	0	0	0.48102	1	5482	5482		52.937	1.744	1	760580	+		40486	27027	26977	26989	46057	46057					0.053217256147036096
PEVTPDMDYL	10	Unmodified	_PEVTPDMDYL_					0	0	0		nc|ENSG00000116690|Q92954-5|PRG4;nc|ENSG00000116690|Q92954-4|PRG4;nc|ENSG00000116690|Q92954-3|PRG4;nc|ENSG00000116690|Q92954-6|PRG4;nc|ENSG00000116690|Q92954-2|PRG4;ENSG00000116690|ENST00000445192|PRG4	nc|ENSG00000116690|Q92954-5|PRG4	nc|ENSG00000116690|Q92954-5|PRG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.2637329101562	2	590.265547	1178.51654	-0.77729	-0.00045881	-1.7671	-0.001043	-2.5443	-0.0015018	590.2644066701059	82.337	1.1366	82.764	82.313	83.45	0.42645					72	27	4	0	0	0	0.46422	1	9556	9556		58.782	0.55203	1	3187300			40487	2934	26978	26990	46058	46058					-0.06557654319021822
PEVVLKHLKPL	11	Unmodified	_PEVVLKHLKPL_					0	0	0			REV__nc|ENSG00000285253|Q6N043-4|ZNF280D	REV__nc|ENSG00000285253|Q6N043-4|ZNF280D	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	636.6650390625	2	636.905548	1271.79654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.522	1	60.912	60.412	61.412	0.38945								0	0	0	0.56276	1	6424	6424		30.318	7.7381	1		+		40488	30283	26979	26991	46059	46059					0.17151674804745198
PEWAAARHL	9	Unmodified	_PEWAAARHL_					0	0	0			REV__nc|ENSG00000121753|O60241-4|ADGRB2	REV__nc|ENSG00000121753|O60241-4|ADGRB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.7431030273438	2	525.777608	1049.54066	0.33357	0.00017538	-2.2474	-0.0011816	-1.9138	-0.0010063	525.7765759043053	75.08	0.50393	75.472	75.235	75.739	0.39182					26	11	3	0	0	0	0.20789	1	8490	8490		10.866	0	1	526370	+		40489	18466	26980	26992	46060	46060					0.01787411740178868
PEWCRWGW	8	Unmodified	_PEWCRWGW_					0	0	0		ENST00000380289.2_1_X:16170776-16171058:+|nuORF	ENST00000380289.2_1_X:16170776-16171058:+|nuORF	ENST00000380289.2_1_X:16170776-16171058:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.243896484375	2	560.245086	1118.47562	0.071167	3.9871E-05	-1.4391	-0.00080625	-1.3679	-0.00076638	560.2441559527115	27.069	0.58004	27.03	26.765	27.345	-0.038525					34	14	3	0	0	0	0.90465	1	1257	1257		40.573	3.5441	1	81704			40490	10918	26981	26993	46061	46061					-0.07887906057317196
PEWGLMLK	8	Unmodified	_PEWGLMLK_					0	0	0			REV__ENST00000497604.1_1_2:106710484-106717684:-|nuORF	REV__ENST00000497604.1_1_2:106710484-106717684:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.7112731933594	2	487.262413	972.510274	1.1951	0.00058231	1.3024	0.00063459	2.4974	0.0012169	487.26283261893684	27.62	0.5164	27.365	27.115	27.632	-0.25465					17	11	2	0	0	0	0.4196	1	1607	1607		38.806	3.1879	1	71311	+		40491	18138	26982	26994	46062	46062					0.022919170307659442
PEWLNVLLQP	10	Unmodified	_PEWLNVLLQP_					0	0	0			REV__ENSG00000177489|ENST00000320065|OR2G2	REV__ENSG00000177489|ENST00000320065|OR2G2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.834716796875	2	604.837331	1207.66011	0.070625	4.2716E-05	-3.1989	-0.0019348	-3.1282	-0.0018921	604.8352066478271	50.2	0.61456	50.108	49.762	50.377	-0.091797					35	15	3	0	0	0	0.60066	1	3917	3917		30.318	7.7381	1	249710	+		40492	22211	26983	26995	46063	46063					0.06458560574242256
PEWSWCYSFA	10	Unmodified	_PEWSWCYSFA_					0	0	0			REV__nc|ENSG00000138639|Q8N264-5|ARHGAP24	REV__nc|ENSG00000138639|Q8N264-5|ARHGAP24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	638.2606811523438	2	638.260599	1274.50665	-0.94164	-0.00060101	0.50884	0.00032477	-0.4328	-0.00027624	638.260785708912	81.621	0.8294	81.735	81.352	82.181	0.11426					43	18	3	0	0	0	0.85934	1	7802	7802		35.618	1.4457	1	517350	+		40493	29885	26984	26996	46064	46064					-0.11962797533738012
PEWYGIKGM	9	Unmodified	_PEWYGIKGM_					0	0	0		ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.7658081054688	2	540.762778	1079.511	0.010632	5.7495E-06	3.2081	0.0017348	3.2188	0.0017406	540.7642196802963	49.772	0.81682	49.798	49.331	50.148	0.025574					32	20	2	0	0	0	0.71772	1	3853	3853		39.253	0	1	155480			40494	789	26985	26997	46065	46065					-0.025572883201675722
PEYEPLFY	8	Unmodified	_PEYEPLFY_					0	0	0			REV__nc|ENSG00000162894|O60667-2|FCMR	REV__nc|ENSG00000162894|O60667-2|FCMR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.247314453125	2	529.247483	1056.48041	-0.03765	-1.9926E-05	-0.97615	-0.00051662	-1.0138	-0.00053655	529.2469498347128	60.241	1.3654	60.227	59.286	60.651	-0.013729					51	34	2	0	0	0	0.84634	1	5560	5560		60.294	0	1	159250	+		40495	29976	26986	26998	46066	46066					-0.045567434335680446
PEYIPISD	8	Unmodified	_PEYIPISD_					0	0	0		ENSG00000103550|ENST00000219837|KNOP1;ENST00000565844.1_1_16:19721758-19726357:-|nuORF	ENSG00000103550|ENST00000219837|KNOP1	ENSG00000103550|ENST00000219837|KNOP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.2295227050781	2	467.231833	932.449113	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.527	1	72.487	71.987	72.987	-0.04039								0	0	0	0.29452	1	7087	7087		33.516	1.5607	1				40496	2093	26987	26999	46067	46067					-0.019813164676747874
PEYLKIKLKLR	11	Unmodified	_PEYLKIKLKLR_					0	0	0		ENST00000408939.3_1_2:178417606-178417663:-|nuORF	ENST00000408939.3_1_2:178417606-178417663:-|nuORF	ENST00000408939.3_1_2:178417606-178417663:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.6236267089844	3	467.637779	1399.89151	-0.97659	-0.00045669	-1.5491	-0.00072443	-2.5257	-0.0011811	467.63749062736065	107.44	0.41473	107.58	107.44	107.86	0.13866					23	9	3	0	0	0	0.17586	1	11527	11527		21.78	7.0016	1	125800			40497	11293	26988	27000	46068	46068					0.20755608275908344
PEYPDTAS	8	Unmodified	_PEYPDTAS_					0	0	0			REV__ENST00000299882.9_1_11:113570876-113576977:-|nuORF	REV__ENST00000299882.9_1_11:113570876-113576977:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.1985778808594	2	440.190165	878.365778	1.497	0.00065898	-4.3994	-0.0019366	-2.9024	-0.0012776	440.1880256805722	97.85	0.53436	98.227	97.998	98.532	0.37679					21	12	2	0	0	0	0.4196	1	11854	11854		13.775	0	1	102460	+		40498	24743	26989	27001	46069	46069					-0.07827052915524746
PEYPDTAS	8	Unmodified	_PEYPDTAS_					0	0	0			REV__ENST00000299882.9_1_11:113570876-113576977:-|nuORF	REV__ENST00000299882.9_1_11:113570876-113576977:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	440.190165	878.365778	1.1278	0.00049646	-3.8959	-0.0017149	-2.768	-0.0012185	440.18830465668964	97.777	0.49183	98.162	97.973	98.465	0.38548	-0.03228	0.00018496	NaN	19.36	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99444	+		40499	24743	26989	27001							-0.07827052915524746
PFAFTLGVGR	10	Unmodified	_PFAFTLGVGR_					0	0	0			REV__ENST00000378426.5_2_X:40487439-40487763:-|nuORF	REV__ENST00000378426.5_2_X:40487439-40487763:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.81689453125	2	532.798009	1063.58147	-1.4497	-0.00077241	0.89745	0.00047816	-0.55227	-0.00029425	532.7982011289731	89.13	0.61594	89.601	89.314	89.93	0.47068					20	14	2	0	0	0	0.37624	1	10584	10584		24.519	13.008	1	156560	+		40500	25895	26990	27002	46070	46070					0.05221753059799994
PFAGGGAG	8	Unmodified	_PFAGGGAG_					0	0	0			REV__ENSG00000197122|ENST00000373578|SRC	REV__ENSG00000197122|ENST00000373578|SRC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.2952270507812	1	633.299101	632.291825	-0.33818	-0.00021417	-3.5381	-0.0022406	-3.8762	-0.0024548	633.296805429476	64.635	2.7964	64.673	62.801	65.598	0.037849					198	115	2	0	0	0	0.85228	1	5556	5556		10.185	0	1	214370	+		40501	15774	26991	27003	46071	46071					-0.03902931496520523
PFAGVLRG	8	Unmodified	_PFAGVLRG_					0	0	0		ENSG00000069399|ENST00000164227|BCL3	ENSG00000069399|ENST00000164227|BCL3	ENSG00000069399|ENST00000164227|BCL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.7394714355469	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.83466	3	1926	1887;1926;1990		37.028	2.5549	1	1364200			40502	1219	26992	27004	46072;46073;46074	46073					0.05025854279756459
PFAGVLRG	8	Unmodified	_PFAGVLRG_					0	0	0		ENSG00000069399|ENST00000164227|BCL3	ENSG00000069399|ENST00000164227|BCL3	ENSG00000069399|ENST00000164227|BCL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7394104003906	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.83466	2	1976	1976;2012		28.254	5.2176	1	1654100			40503	1219	26992	27004	46075;46076	46075					0.05025854279756459
PFAVPHSAM	9	Unmodified	_PFAVPHSAM_					0	0	0		ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000197136|Q9H6A9-3|PCNX3;ENST00000439247.2_1_11:65394334-65404446:+|nuORF;ENST00000556516.1_1_14:71517389-71527455:+|nuORF;nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000100731|Q96RV3-3|PCNX1;ENSG00000100731|ENST00000304743|PCNX1	ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000100731|Q96RV3-4|PCNX1	ENSG00000197136|ENST00000355703|PCNX3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.277587890625	2	478.736563	955.458573	0.29095	0.00013929	0.6257	0.00029954	0.91665	0.00043883	478.73661138415673	84.648	0.63919	85.088	84.786	85.425	0.43967					28	15	2	0	0	0	0.20789	1	9908	9908		26.796	6.3143	1	291470			40504	8138;1864	26993	27005	46077	46077					-0.02093826663121945
PFCKIAAK	8	Unmodified	_PFCKIAAK_					0	0	0		nc|ENSG00000160208|Q14684-2|RRP1B;ENSG00000160208|ENST00000340648|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.2518615722656	2	439.251849	876.489145	2.0012	0.00087905	-0.052573	-2.3093E-05	1.9487	0.00085596	439.25182012841026	90.753	2.1923	90.8	90.262	92.454	0.046448					92	52	4	0	0	0	0.80706	1	9393	9393		19.36	0	1	1626100			40505	5565	26994	27006	46078	46078					0.04595951721910296
PFCQVRRLLE	10	Unmodified	_PFCQVRRLLE_					0	0	0		ENST00000555522.1_1_14:75469672-75471687:+|nuORF	ENST00000555522.1_1_14:75469672-75471687:+|nuORF	ENST00000555522.1_1_14:75469672-75471687:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	630.8491821289062	2	630.847707	1259.68086	-0.029329	-1.8502E-05	3.3344	0.0021035	3.3051	0.002085	630.849677894081	111.25	1.2557	111.25	110.42	111.68	0					88	39	3	0	0	0	0.85466	1	11579	11579		20.947	0.91646	1	207570			40506	13734	26995	27007	46079	46079					0.061408276822703556
PFDEELLSD	9	Unmodified	_PFDEELLSD_					0	0	0			REV__ENSG00000010327|ENST00000321725|STAB1	REV__ENSG00000010327|ENST00000321725|STAB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.9955444335938	2	532.742762	1063.47097	0.86712	0.00046195	2.666	0.0014203	3.5332	0.0018823	532.7443557301632	50.88	0.53133	51.632	51.366	51.898	0.75174					28	12	3	0	0	0	0.20789	1	5019	5019		30.504	14.03	1	360190	+		40507	16166	26996	27008	46080	46080					-0.05822556509747301
PFDMSIQELDN	11	Unmodified	_PFDMSIQELDN_					0	0	0		nc|ENSG00000196419|P12956-2|XRCC6	nc|ENSG00000196419|P12956-2|XRCC6	nc|ENSG00000196419|P12956-2|XRCC6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7745666503906	3	436.864066	1307.57037	0.066888	2.9221E-05	-1.5351	-0.00067064	-1.4682	-0.00064142	437.1974352899113	26.381	0.073376	26.49	26.458	26.531	0.10901					4	2	2	0	0	0	0.1767	1	1008	1008		3.026	0	1	16866			40508	15182	26997	27009	46081	46081					-0.07111481887318405
PFDPGTVAAPL	11	Unmodified	_PFDPGTVAAPL_					0	0	0			REV__ENSG00000168334|ENST00000340369|XIRP1	REV__ENSG00000168334|ENST00000340369|XIRP1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	542.783447265625	2	542.787307	1083.56006	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.72	1	50.628	50.128	51.128	-0.091797								0	0	0	0.56276	1	4002	4002		34.173	0	1		+		40509	21480	26998	27010	46082	46082					0.02162323240418118
PFDRHDWI	8	Unmodified	_PFDRHDWI_					0	0	0		ENSG00000004961|ENST00000380762|HCCS	ENSG00000004961|ENST00000380762|HCCS	ENSG00000004961|ENST00000380762|HCCS	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	543.2673950195312	2	543.261791	1084.50903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.237	1	58.223	57.723	58.723	-0.013641								0	0	0	0.29452	1	5294	5294		33.516	1.5607	1				40510	670	26999	27011	46083	46083					-0.029845810137885564
PFDTQPRPD	9	Unmodified	_PFDTQPRPD_					0	0	0		ENST00000598118.1_1_19:35506495-35517042:+|nuORF;nc|ENSG00000089351|Q96CP6-2|GRAMD1A;nc|ENSG00000089351|Q96CP6-3|GRAMD1A;ENSG00000089351|ENST00000317991|GRAMD1A	ENST00000598118.1_1_19:35506495-35517042:+|nuORF	ENST00000598118.1_1_19:35506495-35517042:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.758056640625	2	536.756538	1071.49852	-0.49033	-0.00026319	4.4388	0.0023826	3.9485	0.0021194	536.7587435809163	76.742	1.0271	77.31	76.852	77.879	0.56836					69	30	3	0	0	0	0.28875	1	8778	8778		65.803	2.4969	1	1923700			40511	1623	27000	27012	46084	46084					-0.03436608458855517
PFECCDCG	8	Unmodified	_PFECCDCG_					0	0	0		ENSG00000131849|ENST00000254166|ZNF132;nc|ENSG00000131849|P52740-2|ZNF132	ENSG00000131849|ENST00000254166|ZNF132	ENSG00000131849|ENST00000254166|ZNF132	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2655334472656	2	437.132424	872.250296	0.061828	2.7027E-05	4.235	0.0018513	4.2969	0.0018783	437.1331323414806	25.538	0.20595	25.281	25.218	25.424	-0.2572					6	4	2	0	0	0	0.4196	1	1342	1342		12.207	4.5166	1	26837			40512	3754	27001	27013	46085	46085					-0.1909393963403545
PFERKTID	8	Unmodified	_PFERKTID_					0	0	0		ENSG00000107554|ENST00000324109|DNMBP;nc|ENSG00000107554|Q6XZF7-2|DNMBP	ENSG00000107554|ENST00000324109|DNMBP	ENSG00000107554|ENST00000324109|DNMBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.1073913574219	2	503.271824	1004.5291	2.1609	0.0010875	-1.1539	-0.00058072	1.007	0.00050681	503.27085750191696	27.051	0.44421	26.711	26.504	26.948	-0.34035					15	9	2	0	0	0	0.88601	1	1538	1538		34.173	0	1	52974			40513	2350	27002	27014	46086	46086					0.027011699261947797
PFFKLYYK	8	Unmodified	_PFFKLYYK_					0	0	0		L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|59|2|sense	L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|59|2|sense	L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|59|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.2661743164062	2	553.307678	1104.6008	-0.012379	-6.8492E-06	-1.6944	-0.00093754	-1.7068	-0.00094439	553.8084453780335	55.177	0.12545	55.745	55.658	55.783	0.56836					4	2	2	0	0	0	0.4196	1	5666	5666		21.702	0	1	85333			40514	14684	27003	27015	46087	46087					0.052687093506847305
PFFLLHRW	8	Unmodified	_PFFLLHRW_					0	0	0		nc|ENSG00000189013|Q99706-2|KIR2DL4;nc|ENSG00000189013|Q99706|KIR2DL4	nc|ENSG00000189013|Q99706-2|KIR2DL4	nc|ENSG00000189013|Q99706-2|KIR2DL4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	558.81201171875	2	558.311087	1114.60762	0.3857	0.00021534	2.3042	0.0012864	2.6898	0.0015018	558.3117852271117	48.159	0.46009	48.197	47.991	48.451	0.037735					24	10	4	0	0	0	0.81548	1	3660	3660		20.482	0.48506	1	224270			40515	15173	27004	27016	46088	46088					0.054900670219240055
PFGAGGAG	8	Unmodified	_PFGAGGAG_					0	0	0		ENST00000479098.1_1_2:74725900-74726092:-|nuORF	ENST00000479098.1_1_2:74725900-74726092:-|nuORF	ENST00000479098.1_1_2:74725900-74726092:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.2968139648438	1	633.299101	632.291825	-0.16777	-0.00010625	-3.6652	-0.0023211	-3.8329	-0.0024274	633.2966457110679	64.104	2.6981	64.07	62.816	65.514	-0.034256					164	100	3	0	0	0	0.85228	1	6171	6171		10.185	0	1	238550			40516	12403	27005	27017	46089	46089					-0.03902931496520523
PFGAWGKYK	9	Unmodified	_PFGAWGKYK_					0	0	0		ENSG00000163644|ENST00000608933|PPM1K	ENSG00000163644|ENST00000608933|PPM1K	ENSG00000163644|ENST00000608933|PPM1K	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.1614990234375	2	527.279452	1052.54435	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.282	1	16.282	15.782	16.782	0								0	0	0	0.31472	1	110	110		25.45	0	1				40517	5846	27006	27018	46090	46090					0.02018081514052028
PFGGGGAA	8	Unmodified	_PFGGGGAA_					0	0	0		ENSG00000205903|ENST00000382252|ZNF316	ENSG00000205903|ENST00000382252|ZNF316	ENSG00000205903|ENST00000382252|ZNF316	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.2945556640625	1	633.299101	632.291825	-0.33818	-0.00021417	-3.5381	-0.0022406	-3.8762	-0.0024548	633.296805429476	64.635	2.7964	64.673	62.801	65.598	0.037849					198	115	2	0	0	0	0.85228	1	5772	5772		10.185	0	1	214370			40518	8547	27007	27019	46091	46091					-0.03902931496531892
PFGIKTVKH	9	Unmodified	_PFGIKTVKH_					0	0	0			REV__nc|ENSG00000130779|P30622-2|CLIP1	REV__nc|ENSG00000130779|P30622-2|CLIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.80810546875	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.78983	1	3853	3853		27.882	1.1893	1	1550000	+		40519	18908	27008	27020	46092	46092					0.09042343439477918
PFGILGALIY	10	Unmodified	_PFGILGALIY_					0	0	0		ENSG00000179817|ENST00000314254|MRGPRX4	ENSG00000179817|ENST00000314254|MRGPRX4	ENSG00000179817|ENST00000314254|MRGPRX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.3101196289062	2	532.312961	1062.61137	-0.033882	-1.8036E-05	-3.5551	-0.0018924	-3.589	-0.0019104	532.3110576584982	71.867	0.64647	71.905	71.636	72.282	0.037148					41	24	2	0	0	0	0.85976	1	6817	6817		35.201	1.0282	1	139560			40520	7293	27009	27021	46093	46093					0.0825669200514767
PFGLWKPG	8	Unmodified	_PFGLWKPG_					0	0	0			REV__ENST00000276416.10_1_8:22478274-22478553:-|nuORF	REV__ENST00000276416.10_1_8:22478274-22478553:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.24835205078125	2	451.250163	900.485774	-1.0589	-0.00047784	-2.14	-0.00096567	-3.1989	-0.0014435	451.2490578408484	67.679	1.2813	67.739	67.313	68.595	0.059288					106	47	3	0	0	0	0.89457	1	6040	6040		37.028	1.8278	1	166740	+		40521	24577	27010	27022	46094	46094					0.0315502493956501
PFGTGSKL	8	Unmodified	_PFGTGSKL_					0	0	0			REV__ENST00000588831.5_1_19:36427895-36428069:+|nuORF	REV__ENST00000588831.5_1_19:36427895-36428069:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.7231750488281	2	403.723978	805.433404	0.40958	0.00016536	-0.076812	-3.1011E-05	0.33277	0.00013435	403.72380872064997	64.881	1.7093	65.005	63.854	65.563	0.12396					144	69	3	0	0	0	0.89962	1	5775	5775		38.806	1.647	1	1091100	+		40522	29148	27011	27023	46095	46095					0.022904418059511045
PFHGGREH	8	Unmodified	_PFHGGREH_					0	0	0		ENST00000521713.1_1_7:6179681-6199085:+|nuORF;ENSG00000106346|ENST00000306177|USP42;nc|ENSG00000106346|Q9H9J4|USP42;ENST00000479544.6_1_7:6150764-6196715:+|nuORF	ENST00000521713.1_1_7:6179681-6199085:+|nuORF	ENST00000521713.1_1_7:6179681-6199085:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7233581542969	2	468.725375	935.436198	-1.9165	-0.00089829	-2.7036	-0.0012672	-4.62	-0.0021655	468.7241207550591	90.104	1.871	90.574	90.243	92.114	0.47068					100	46	4	0	0	0	0.91005	1	10674	10674		42.474	5.446	1	6559600			40523	2291	27012	27024	46096	46096					-0.03410290016529416
PFHLLPLKTMS	11	Unmodified	_PFHLLPLKTMS_					0	0	0			REV__ENST00000493918.5_1_3:9475714-9475846:+|nuORF	REV__ENST00000493918.5_1_3:9475714-9475846:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	642.3659057617188	2	642.362659	1282.71076	0.024157	1.5517E-05	0.31281	0.00020094	0.33697	0.00021646	642.3631004001724	110.04	0.91905	110.04	109.8	110.72	0					76	31	3	0	0	0	0.60058	1	11410	11410		44.377	6.5657	1	235710	+		40524	27707	27013	27025	46097	46097					0.0807176662758593
PFHLLPLKTMS	11	Unmodified	_PFHLLPLKTMS_					0	0	0			REV__ENST00000493918.5_1_3:9475714-9475846:+|nuORF	REV__ENST00000493918.5_1_3:9475714-9475846:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3623046875	2	642.362659	1282.71076	-0.045478	-2.9214E-05	1.0149	0.00065195	0.96945	0.00062274	642.3633210062756	111.34	0.40622	111.28	111	111.41	-0.059937					19	12	2	0	0	0	0.6921	1	12107	12107		32.812	0	1	5408100	+		40525	27707	27013	27025	46098	46098					0.0807176662758593
PFHLLPLKTMS	11	Unmodified	_PFHLLPLKTMS_					0	0	0			REV__ENST00000493918.5_1_3:9475714-9475846:+|nuORF	REV__ENST00000493918.5_1_3:9475714-9475846:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.3649291992188	2	642.362659	1282.71076	-1.1506	-0.00073908	1.2206	0.00078404	0.069981	4.4953E-05	642.3639567174044	110.02	1.5274	110.03	109.72	111.24	0.0060425					172	55	4	0	0	0	0.45916	2	11780	11780;11823		54.776	5.3348	1	1394500	+		40526	27707	27013	27025	46099;46100	46099					0.0807176662758593
PFHLLPLKTMS	11	Unmodified	_PFHLLPLKTMS_					0	0	0			REV__ENST00000493918.5_1_3:9475714-9475846:+|nuORF	REV__ENST00000493918.5_1_3:9475714-9475846:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3636474609375	2	642.362659	1282.71076	2.0888	0.0013417	-1.2239	-0.00078617	0.86489	0.00055557	642.3618339329189	111.95	0.24531	111.99	111.85	112.1	0.041832					12	6	2	0	0	0	0.64498	1	13535	13535		39.253	1.4413	1	732830	+		40527	27707	27013	27025	46101	46101					0.0807176662758593
PFIETVPSIDA	11	Unmodified	_PFIETVPSIDA_					0	0	0		nc|ENSG00000166349|P15918-2|RAG1;ENSG00000166349|ENST00000299440|RAG1	nc|ENSG00000166349|P15918-2|RAG1	nc|ENSG00000166349|P15918-2|RAG1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	594.807373046875	2	594.810979	1187.6074	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.702	1	62.725	62.225	63.225	0.022984								0	0	0	0.56276	1	5471	5471		32.812	1.2826	1				40528	6183	27014	27026	46102	46102					0.021105577207663373
PFIGKKSKN	9	Unmodified	_PFIGKKSKN_					0	0	0			REV__ENSG00000147459|ENST00000276440|DOCK5	REV__ENSG00000147459|ENST00000276440|DOCK5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8036804199219	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.7932	2	8405	8405;8464		23.042	0	1	2989000	+		40529	20072	27015	27027	46103;46104	46103					0.08902039576844345
PFIPKGRPA	9	Unmodified	_PFIPKGRPA_					0	0	0			REV__ENSG00000186212|ENST00000334306|SOWAHB	REV__ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7951354980469	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.76996	1	4261	4261		33.516	5.2613	1	1232600	+		40530	22837	27016	27028	46105	46105					0.08446074267988024
PFKGLPASVL	10	Unmodified	_PFKGLPASVL_					0	0	0			REV__ENST00000558180.2_1_16:54318400-54319510:-|nuORF	REV__ENST00000558180.2_1_16:54318400-54319510:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.2977294921875	2	514.810585	1027.60662	1.7091	0.00087989	3.7848	0.0019485	5.494	0.0028284	514.8130151271074	96.121	0.62323	96.542	96.194	96.817	0.42051					21	14	2	0	0	0	0.37624	1	11515	11515		47.657	23.455	1	85880	+		40531	22213	27017	27029	46106	46106					0.09391807862357382
PFKIHKNV	8	Unmodified	_PFKIHKNV_					0	0	0			REV__nc|ENSG00000156256|Q9Y5T5-4|USP16	REV__nc|ENSG00000156256|Q9Y5T5-4|USP16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7953186035156	2	491.795269	981.575986	-1.7512	-0.00086123	2.5855	0.0012715	0.83426	0.00041029	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.81548	1	3707	3707		20.482	0	1	2627300	+		40532	20477	27018	27030	46107	46107					0.08446074267988024
PFKLKVIRSAD	11	Unmodified	_PFKLKVIRSAD_					0	0	0		chr4:153397333-153414751|50|17.04|0.21|6.33|+|ENST00000674680|MND1,MND1;nc|ENSG00000109654|Q9C040|TRIM2;ENSG00000109654|ENST00000338700|TRIM2	chr4:153397333-153414751|50|17.04|0.21|6.33|+|ENST00000674680|MND1,MND1	chr4:153397333-153414751|50|17.04|0.21|6.33|+|ENST00000674680|MND1,MND1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	637.3849487304688	2	637.38498	1272.75541	-0.1048	-6.6795E-05	1.2204	0.00077786	1.1156	0.00071106	637.3857247383207	112.92	0.8234	112.85	112.73	113.55	-0.067215					48	36	2	0	0	0	0.76699	1	12280	12280		18.262	4.808	1	309670			40533	417	27019	27031	46108	46108					0.12993913765262732
PFKLKVIRSAD	11	Unmodified	_PFKLKVIRSAD_					0	0	0		chr4:153397333-153414751|50|17.04|0.21|6.33|+|ENST00000674680|MND1,MND1;nc|ENSG00000109654|Q9C040|TRIM2;ENSG00000109654|ENST00000338700|TRIM2	chr4:153397333-153414751|50|17.04|0.21|6.33|+|ENST00000674680|MND1,MND1	chr4:153397333-153414751|50|17.04|0.21|6.33|+|ENST00000674680|MND1,MND1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	637.38498	1272.75541	1.4639	0.00093304	-0.66681	-0.00042501	0.79705	0.00050803	637.3844010502193	112.82	10.498	112.85	109.53	120.03	0.028854	-0.00048203	-0.0020431	NaN	18.262	868	373	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28739000			40534	417	27019	27031							0.12993913765262732
PFKPPQRI	8	Unmodified	_PFKPPQRI_					0	0	0		ENSG00000129933|ENST00000262815|MAU2	ENSG00000129933|ENST00000262815|MAU2	ENSG00000129933|ENST00000262815|MAU2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.798095703125	2	491.795269	981.575986	-1.178	-0.00057935	-0.11787	-5.7967E-05	-1.2959	-0.00063732	491.79505307157757	43.662	1.2118	44.112	43.311	44.523	0.45025					60	29	3	0	0	0	0.86288	1	3922	3922		26.796	0	1	1655700			40535	3610	27020	27032	46109	46109					0.08446074267999393
PFKPPQRI	8	Unmodified	_PFKPPQRI_					0	0	0		ENSG00000129933|ENST00000262815|MAU2	ENSG00000129933|ENST00000262815|MAU2	ENSG00000129933|ENST00000262815|MAU2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79547119140625	2	491.795269	981.575986	-0.91317	-0.00044909	1.7019	0.00083701	0.78877	0.00038791	491.79595933805444	45.694	2.2667	46.589	46.327	48.594	0.89542					151	55	4	0	0	0	0.86791	1	4354	4354		28.254	1.4582	1	3110500			40536	3610	27020	27032	46110	46110					0.08446074267999393
PFKPRGREFSF	11	Unmodified	_PFKPRGREFSF_					0	0	0		nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF	nc|ENSG00000263001|P78347-2|GTF2I	nc|ENSG00000263001|P78347-2|GTF2I	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.58087158203125	3	456.578811	1366.7146	-0.023733	-1.0836E-05	4.0937	0.0018691	4.07	0.0018583	456.5805848649042	18.532	0.42102	18.055	17.89	18.311	-0.47694					26	8	4	0	0	0	0.70584	1	423	423		30.569	1.0181	1	286010			40537	8936	27021	27033	46111	46111					0.04591572445656311
PFKQLLLPAKV	11	Unmodified	_PFKQLLLPAKV_					0	0	0			REV__ENSG00000131944|ENST00000588258|FAAP24	REV__ENSG00000131944|ENST00000588258|FAAP24	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.26922607421875	3	418.604186	1252.79073	-1.8624	-0.00077961	3.2279	0.0013512	1.3655	0.0005716	418.60545242213567	49.334	1.6272	49.359	48.04	49.667	0.025574					69	41	2	0	0	0	0.17643	1	3742	3742		8.7993	0	1	105080	+		40538	18978	27022	27034	46112	46112					0.1744457629306453
PFKQRLDHLV	10	Unmodified	_PFKQRLDHLV_					0	0	0			REV__nc|ENSG00000055208|Q9NYJ8-2|TAB2	REV__nc|ENSG00000055208|Q9NYJ8-2|TAB2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.24310302734375	3	418.24354	1251.70879	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.097	1	32.155	31.655	32.655	0.058315								0	0	0	0.45132	1	1496	1496		20.837	1.2102	1		+		40539	16410	27023	27035	46113	46113					0.09300473933990361
PFKRFLRKKSK	11	Unmodified	_PFKRFLRKKSK_					0	0	0		ENSG00000112562|ENST00000356284|SMOC2;nc|ENSG00000112562|Q9H3U7-2|SMOC2	ENSG00000112562|ENST00000356284|SMOC2	ENSG00000112562|ENST00000356284|SMOC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9737548828125	3	478.973384	1433.89832	0.065395	3.1322E-05	2.2352	0.0010706	2.3006	0.0011019	478.9743761165068	49.154	1.8702	49.148	48.387	50.257	-0.0056381					110	43	3	0	0	0	0.8498	1	4067	4067		6.001	0	1	187140			40540	2669	27024	27036	46114	46114					0.19872965947138255
PFKRFLRKKSK	11	Unmodified	_PFKRFLRKKSK_					0	0	0		ENSG00000112562|ENST00000356284|SMOC2;nc|ENSG00000112562|Q9H3U7-2|SMOC2	ENSG00000112562|ENST00000356284|SMOC2	ENSG00000112562|ENST00000356284|SMOC2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97491455078125	3	478.973384	1433.89832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.457	1	60.465	59.965	60.965	0.0081177								0	0	0	0.56276	1	5237	5237		9.6461	0.84683	1				40541	2669	27024	27036	46115	46115					0.19872965947138255
PFKRFLRKKSK	11	Unmodified	_PFKRFLRKKSK_					0	0	0		ENSG00000112562|ENST00000356284|SMOC2;nc|ENSG00000112562|Q9H3U7-2|SMOC2	ENSG00000112562|ENST00000356284|SMOC2	ENSG00000112562|ENST00000356284|SMOC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.97406005859375	3	478.973384	1433.89832	-1.5701	-0.00075202	2.0995	0.0010056	0.52947	0.0002536	479.30847879064856	41.431	1.1581	41.845	41.508	42.666	0.4139					113	30	5	0	0	0	0.82431	1	3671	3671		7.6794	1.6784	1	5661300			40542	2669	27024	27036	46116	46116					0.19872965947138255
PFKRSRVRLKN	11	Unmodified	_PFKRSRVRLKN_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.6237487792969	3	467.624755	1399.85244	0.26151	0.00012229	-2.2717	-0.0010623	-2.0102	-0.00094002	467.6235907546661	107.88	0.45378	107.92	107.52	107.97	0.035622					34	10	5	0	0	0	0.74405	1	11841	11841		23.378	0.81632	1	19594000	+		40543	16117	27025	27037	46117	46117					0.16850320764933713
PFKRSRVRLKN	11	Unmodified	_PFKRSRVRLKN_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.6236267089844	3	467.624755	1399.85244	-0.97629	-0.00045654	-1.9868	-0.00092906	-2.9631	-0.0013856	467.62378407363303	107.84	0.75049	107.98	107.28	108.03	0.13866					91	18	6	0	0	0	0.74771	1	11527	11527		22.562	0	1	26120000	+		40544	16117	27025	27037	46118	46118					0.16850320764933713
PFLALNQLPQ	10	Unmodified	_PFLALNQLPQ_					0	0	0		nc|ENSG00000159063|Q9BVK2-2|ALG8;ENSG00000159063|ENST00000299626|ALG8;ENST00000524925.1_1_11:77817969-77825348:-|nuORF	nc|ENSG00000159063|Q9BVK2-2|ALG8	nc|ENSG00000159063|Q9BVK2-2|ALG8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.82275390625	2	570.824224	1139.63389	-1.1206	-0.00063967	1.4828	0.00084642	0.36219	0.00020675	570.8249841435919	61.716	0.70389	61.707	61.602	62.306	-0.0094147					70	28	3	0	0	0	0.85251	1	5716	5716		19.997	0	1	536910			40545	5508	27026	27038	46119	46119					0.06966291402750358
PFLCPRRAT	9	Unmodified	_PFLCPRRAT_					0	0	0			REV__ENST00000542570.5_2_17:18212223-18218150:-|nuORF	REV__ENST00000542570.5_2_17:18212223-18218150:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8289794921875	2	530.789661	1059.56477	-0.16173	-8.5846E-05	0.54753	0.00029062	0.3858	0.00020478	530.7899088357285	73.713	0.54068	74.101	73.956	74.496	0.38779					23	13	2	0	0	0	0.20789	1	8314	8314		29.15	0	1	322160	+		40546	28500	27027	27039	46120	46120					0.03736928902185355
PFLGIPRGT	9	Unmodified	_PFLGIPRGT_					0	0	0		nc|ENSG00000162105|Q9UPX8-4|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;ENSG00000162105|ENST00000601538|SHANK2;nc|ENSG00000162105|Q9UPX8-2|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27789306640625	2	479.279452	956.544351	-1.1288	-0.000541	-3.1146	-0.0014928	-4.2434	-0.0020338	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.7932	1	7590	7590		26.693	2.4902	1	1311100			40547	5669	27028	27040	46121	46121					0.0643408151404401
PFLGIPRGT	9	Unmodified	_PFLGIPRGT_					0	0	0		nc|ENSG00000162105|Q9UPX8-4|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;ENSG00000162105|ENST00000601538|SHANK2;nc|ENSG00000162105|Q9UPX8-2|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27752685546875	2	479.279452	956.544351	-0.098426	-4.7173E-05	-4.2487	-0.0020363	-4.3471	-0.0020835	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.78058	1	8047	8047		30.504	0.18592	1	1929800			40548	5669	27028	27040	46122	46122					0.0643408151404401
PFLGIPRGT	9	Unmodified	_PFLGIPRGT_					0	0	0		nc|ENSG00000162105|Q9UPX8-4|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;ENSG00000162105|ENST00000601538|SHANK2;nc|ENSG00000162105|Q9UPX8-2|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.277587890625	2	479.279452	956.544351	-0.93682	-0.000449	-3.4908	-0.001673	-4.4276	-0.002122	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.77546	2	8110	8110;8287		31.955	2.3082	1	2046100			40549	5669	27028	27040	46123;46124	46123					0.0643408151404401
PFLGLSHYR	9	Unmodified	_PFLGLSHYR_					0	0	0			REV__nc|ENSG00000182606|Q9UPV9-2|TRAK1;REV__ENSG00000182606|ENST00000327628|TRAK1	REV__nc|ENSG00000182606|Q9UPV9-2|TRAK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3170776367188	2	545.295633	1088.57671	0.1564	8.5285E-05	0.96535	0.0005264	1.1218	0.00061169	545.7971116054116	91.208	0.20538	91.425	91.297	91.502	0.21737					6	4	2	0	0	0	0.20789	1	9166	9166		10.866	0	1	56926	+		40550	30079;22534	27029	27041	46125	46125					0.03596868917043139
PFLGRRGN	8	Unmodified	_PFLGRRGN_					0	0	0			REV__ENSG00000147010|ENST00000397821|SH3KBP1	REV__ENSG00000147010|ENST00000397821|SH3KBP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	458.7874755859375	2	458.759218	915.503883	0.81267	0.00037282	3.1677	0.0014532	3.9804	0.001826	458.7609038746968	92.812	0.16223	92.857	92.795	92.958	0.045448					5	3	2	0	0	0	0.4196	1	9708	9708		25.45	0	1	68881	+		40551	20045	27030	27042	46126	46126					0.042751599142775376
PFLIFCFRVL	10	Unmodified	_PFLIFCFRVL_					0	0	0		ENST00000409790.5_2_16:11273112-11273262:+|nuORF	ENST00000409790.5_2_16:11273112-11273262:+|nuORF	ENST00000409790.5_2_16:11273112-11273262:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.31463623046875	3	418.9071	1253.69947	0.11006	4.6105E-05	-0.39069	-0.00016366	-0.28063	-0.00011756	419.2408416681702	20.676	0.47318	20.046	19.9	20.373	-0.62961					16	10	3	0	0	0	0.37624	1	670	670		12.207	2.5605	1	30449			40552	11313	27031	27043	46127	46127					0.08276989324076567
PFLLNIQPAS	10	Unmodified	_PFLLNIQPAS_					0	0	0			REV__ENST00000339733.9_2_14:23596388-23597552:-|nuORF	REV__ENST00000339733.9_2_14:23596388-23597552:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.8137817382812	2	550.310949	1098.60735	0.46363	0.00025514	-4.3107	-0.0023722	-3.8471	-0.0021171	550.3065010075525	57.842	1.1821	57.952	57.383	58.565	0.11027					82	57	2	0	0	0	0.86471	1	4898	4898		30.318	3.2704	1	234970	+		40553	25238	27032	27044	46128	46128					0.06198602511403806
PFLLNIQPAS	10	Unmodified	_PFLLNIQPAS_					0	0	0			REV__ENST00000339733.9_2_14:23596388-23597552:-|nuORF	REV__ENST00000339733.9_2_14:23596388-23597552:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.8137817382812	2	550.310949	1098.60735	0.46363	0.00025514	-4.3107	-0.0023722	-3.8471	-0.0021171	550.3065010075525	57.842	1.1821	57.952	57.383	58.565	0.11027					82	57	2	0	0	0	0.37624	1	4898	4898		30.318	6.115	1	234970	+		40554	25238	27032	27044	46129	46129					0.06198602511403806
PFLLPRRDRAL	11	Unmodified	_PFLLPRRDRAL_					0	0	0		ENSG00000138035|ENST00000447944|PNPT1	ENSG00000138035|ENST00000447944|PNPT1	ENSG00000138035|ENST00000447944|PNPT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9436340332031	3	451.941973	1352.80409	-0.61036	-0.00027585	3.6213	0.0016366	3.0109	0.0013608	451.94349825987973	55.257	1.4276	55.22	54.668	56.095	-0.036823					123	46	4	0	0	0	0.75121	1	4583	4583		21.78	3.2494	1	459960			40555	4258	27033	27045	46130	46130					0.14179827125030897
PFLPGRVPALP	11	Unmodified	_PFLPGRVPALP_					0	0	0			REV__nc|ENSG00000289604|P0CG41|CTAGE8	REV__nc|ENSG00000289604|P0CG41|CTAGE8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3546752929688	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.33	1	114.31	113.81	114.81	-0.024452								0	0	0	0.56276	1	12666	12666		21.96	2.5999	1		+		40556	23980	27034	27046	46131	46131					0.1114287453635825
PFLQPGRLV	9	Unmodified	_PFLQPGRLV_					0	0	0		ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8081665039062	2	513.808377	1025.6022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.467	1	57.437	56.937	57.937	-0.029865								0	0	0	0.31472	1	5302	5302		25.45	1.2474	1				40557	920	27035	27047	46132	46132					0.0904234343945518
PFLRIPSH	8	Unmodified	_PFLRIPSH_					0	0	0		ENST00000429979.5_2_13:46942875-46946090:-|nuORF	ENST00000429979.5_2_13:46942875-46946090:-|nuORF	ENST00000429979.5_2_13:46942875-46946090:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.6464538574219	2	483.779619	965.544686	0.17415	8.4252E-05	-0.81682	-0.00039516	-0.64267	-0.00031091	483.779101321174	46.311	0.47538	46.297	46.103	46.578	-0.013821					20	11	2	0	0	0	0.4196	1	3724	3724		7.1934	0	1	113480			40558	11620	27036	27048	46133	46133					0.06053501233895986
PFLRIPSH	8	Unmodified	_PFLRIPSH_					0	0	0		ENST00000429979.5_2_13:46942875-46946090:-|nuORF	ENST00000429979.5_2_13:46942875-46946090:-|nuORF	ENST00000429979.5_2_13:46942875-46946090:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.6462097167969	2	483.779619	965.544686	-1.7127	-0.00082858	1.3283	0.00064261	-0.38439	-0.00018596	483.7798733912859	46.468	0.52499	46.464	46.112	46.637	-0.0041618					17	12	2	0	0	0	0.4196	1	3772	3772		24.203	11.244	1	102880			40559	11620	27036	27048	46134	46134					0.06053501233895986
PFLSFLTSF	9	Unmodified	_PFLSFLTSF_					0	0	0			REV__ENST00000374825.8_1_6:32948646-32949051:+|nuORF	REV__ENST00000374825.8_1_6:32948646-32949051:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7814331054688	2	529.781493	1057.54843	0.45896	0.00024315	-1.0947	-0.00057996	-0.63575	-0.00033681	529.7806261653575	52.825	1.5318	53.249	52.638	54.169	0.42348					117	36	6	0	0	0	0.72402	1	5285	5285		38.806	8.4884	1	6482700	+		40560	25800	27037	27049	46135	46135					0.021961262170862028
PFLVQRKP	8	Unmodified	_PFLVQRKP_					0	0	0		nc|ENSG00000102043|Q96EF0-2|MTMR8;ENSG00000102043|ENST00000374852|MTMR8	nc|ENSG00000102043|Q96EF0-2|MTMR8	nc|ENSG00000102043|Q96EF0-2|MTMR8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.6495361328125	2	492.803094	983.591636	-2.213	-0.0010906	2.8565	0.0014077	0.64343	0.00031708	492.8042981732511	42.126	0.6228	42.54	42.2	42.823	0.4139					19	15	3	0	0	0	0.4196	1	3767	3767		28.254	7.7724	1	149420			40561	1983	27038	27050	46136	46136					0.09918360785036384
PFLVQRKP	8	Unmodified	_PFLVQRKP_					0	0	0		nc|ENSG00000102043|Q96EF0-2|MTMR8;ENSG00000102043|ENST00000374852|MTMR8	nc|ENSG00000102043|Q96EF0-2|MTMR8	nc|ENSG00000102043|Q96EF0-2|MTMR8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	492.803094	983.591636	-1.8211	-0.00089745	3.758	0.001852	1.9369	0.00095451	492.80498057160685	41.684	0.22007	42.318	42.172	42.392	0.6339	-0.11079	0.00061473	NaN	28.254	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98639			40562	1983	27038	27050							0.09918360785036384
PFLVVLPLN	9	Unmodified	_PFLVVLPLN_					0	0	0			REV__chrX:101145199-101146153|62|27.95|0.99|4.82|+|ENST00000423383|CENPI,CENPI	REV__chrX:101145199-101146153|62|27.95|0.99|4.82|+|ENST00000423383|CENPI,CENPI	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.2552185058594	2	506.315503	1010.61645	-1.0564	-0.00053487	0.62734	0.00031763	-0.42906	-0.00021724	506.31605996505425	42.849	0.29109	43.547	43.381	43.672	0.69754					11	6	3	0	0	0	0.20789	1	3868	3868		26.796	8.4717	1	146470	+		40563	15941	27039	27051	46137	46137					0.1115699586774781
PFNGRIID	8	Unmodified	_PFNGRIID_					0	0	0		ENSG00000197077|ENST00000358431|KIAA1671	ENSG00000197077|ENST00000358431|KIAA1671	ENSG00000197077|ENST00000358431|KIAA1671	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.25067138671875	2	466.253434	930.492316	0.40858	0.0001905	0.44177	0.00020598	0.85035	0.00039648	466.2535455662522	60.895	1.1821	61.014	60.015	61.197	0.11901					69	45	2	0	0	0	0.87479	1	5208	5208		30.504	1.3541	1	266480			40564	8131	27040	27052	46138	46138					0.024289181002814075
PFNPIIPK	8	Unmodified	_PFNPIIPK_					0	0	0			REV__ENSG00000187372|ENST00000341948|PCDHB13	REV__ENSG00000187372|ENST00000341948|PCDHB13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2478332519531	2	463.278921	924.543289	-0.056002	-2.5945E-05	-3.8776	-0.0017964	-3.9336	-0.0018224	463.2774577742599	30.367	0.26241	30.347	30.205	30.467	-0.019875					8	5	2	0	0	0	0.4196	1	2012	2012		3.6843	0.27433	1	33475	+		40565	22913	27041	27053	46139	46139					0.07799867145126882
PFNRSPLT	8	Unmodified	_PFNRSPLT_					0	0	0		ENSG00000110344|ENST00000252108|UBE4A;nc|ENSG00000110344|Q14139-2|UBE4A	ENSG00000110344|ENST00000252108|UBE4A	ENSG00000110344|ENST00000252108|UBE4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.2554931640625	2	466.253434	930.492316	-0.7568	-0.00035286	1.6057	0.00074864	0.84886	0.00039578	466.25405843319766	61.038	1.081	61.046	60.083	61.164	0.0081177					68	38	2	0	0	0	0.87064	1	5293	5293		29.15	1.2673	1	201940			40566	2523	27042	27054	46140	46140					0.024289181002814075
PFPAVFALKLP	11	Unmodified	_PFPAVFALKLP_					0	0	0		ENST00000311151.9_2_8:26435647-26435743:+|nuORF	ENST00000311151.9_2_8:26435647-26435743:+|nuORF	ENST00000311151.9_2_8:26435647-26435743:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.917724609375	3	400.577749	1198.71142	5.5421	0.00222	1.9537	0.0007826	7.4958	0.0030026	400.91304036236716	112.56	0.48872	112.6	112.44	112.93	0.032707					21	15	2	0	0	0	0.76579	1	13655	13655		18.531	1.8137	1	26399			40567	9921	27043	27055	46141	46141					0.1200092933893302
PFPFDEGSF	9	Unmodified	_PFPFDEGSF_					0	0	0			REV__ENST00000531406.1_1_14:24661338-24662280:-|nuORF	REV__ENST00000531406.1_1_14:24661338-24662280:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7928466796875	2	521.729458	1041.44436	0.0044735	2.334E-06	-0.59718	-0.00031157	-0.59271	-0.00030923	521.729167453356	78.64	0.54964	79.203	78.952	79.502	0.56332					20	12	2	0	0	0	0.20789	1	8996	8996		47.916	1.9636	1	138040	+		40568	28299	27044	27056	46142	46142					-0.07470200610418942
PFPIVLLI	8	Unmodified	_PFPIVLLI_					0	0	0			REV__ENSG00000176895|ENST00000641490|OR51A7	REV__ENSG00000176895|ENST00000641490|OR51A7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30157470703125	2	456.301865	910.589176	-1.9609	-0.00089476	0.42413	0.00019353	-1.5368	-0.00070123	456.3019244318546	33.431	1.5568	33.431	33.135	34.692	0					145	44	4	0	0	0	0.94139	1	1869	1869		5.0869	0	1	2313000	+		40569	22152	27045	27057	46143	46143					0.13030512327384258
PFPQGRVVI	9	Unmodified	_PFPQGRVVI_					0	0	0			REV__ENST00000302926.6_1_17:7322009-7322306:+|nuORF	REV__ENST00000302926.6_1_17:7322009-7322306:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8008117675781	2	506.800552	1011.58655	-0.19133	-9.6968E-05	1.219	0.00061781	1.0277	0.00052084	506.80123895899897	48.621	1.8046	48.528	47.706	49.51	-0.093178					58	44	2	0	0	0	0.76996	1	3726	3726		33.516	10.473	1	197490	+		40570	24791	27046	27058	46144	46144					0.0812205692243424
PFPQPALLE	9	Unmodified	_PFPQPALLE_					0	0	0			REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	505.2913818359375	2	506.279118	1010.54368	0.7763	0.00039302	-0.090611	-4.5874E-05	0.68569	0.00034715	506.27898146448814	97.199	0.87695	97.362	96.966	97.843	0.16316					25	20	2	0	0	0	0.20789	1	10035	10035		17.365	4.4058	1	96609	+		40571	18722	27047	27059	46145	46145					0.03883242074323334
PFPRSVKVP	9	Unmodified	_PFPRSVKVP_					0	0	0			REV__ENST00000451251.5_1_1:249152755-249153022:-|nuORF	REV__ENST00000451251.5_1_1:249152755-249153022:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8120727539062	2	513.808377	1025.6022	0.034734	1.7846E-05	1.2224	0.00062807	1.2571	0.00064592	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.76764	1	4666	4666		34.173	0	1	666950	+		40572	26883	27048	27060	46146	46146					0.09042343439477918
PFPSASGALSL	11	Unmodified	_PFPSASGALSL_					0	0	0			REV__nc|ENSG00000103932|Q9BWH6-2|RPAP1	REV__nc|ENSG00000103932|Q9BWH6-2|RPAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7760620117188	2	523.779482	1045.54441	-0.91295	-0.00047818	-3.9602	-0.0020743	-4.8732	-0.0025525	523.7772259766621	44.6	0.64964	45.444	45.222	45.872	0.84438					29	15	3	0	0	0	0.15108	2	4114	4114;4127		82.241	16.343	1	1571700	+		40573	17429	27049	27061	46147;46148	46147					0.023460367233838042
PFPSGAEILR	10	Unmodified	_PFPSGAEILR_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.49609375	2	543.800749	1085.58694	-1.8846	-0.0010248	-4.2363	-0.0023037	-6.1209	-0.0033285	543.7986129210044	41.451	0.39994	42.084	41.917	42.317	0.6339					21	10	3	0	0	0	0.37624	1	3632	3632		51.193	1.6567	1	604350			40574	1679	27050	27062	46149	46149					0.04757431851612637
PFPSGAEILR	10	Unmodified	_PFPSGAEILR_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	543.800749	1085.58694	-2.6922	-0.001464	-3.6191	-0.0019681	-6.3112	-0.0034321	543.7987640689063	41.595	0.34087	42.009	41.823	42.163	0.4139	-0.037835	0.00025761	NaN	51.193	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	558730			40575	1679	27050	27062							0.04757431851612637
PFPSVRPF	8	Unmodified	_PFPSVRPF_					0	0	0		nc|ENSG00000157766|P16112-3|ACAN;nc|ENSG00000157766|P16112-2|ACAN;nc|ENSG00000157766|P16112|ACAN;ENSG00000157766|ENST00000560601|ACAN	nc|ENSG00000157766|P16112-3|ACAN	nc|ENSG00000157766|P16112-3|ACAN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	473.2599792480469	2	473.760895	945.507237	0.27589	0.00013071	-3.7191	-0.001762	-3.4432	-0.0016313	473.7586229349546	45.13	0.58525	45.179	44.905	45.49	0.048996					23	13	2	0	0	0	0.4196	1	3253	3253		31.955	1.4512	1	122000			40576	5448	27051	27063	46150	46150					0.032304099682846754
PFPTGYKRQR	10	Unmodified	_PFPTGYKRQR_					0	0	0		ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1;ENSG00000179119|ENST00000336349|SPTY2D1	ENST00000536336.5_1_11:18633859-18655855:-|nuORF	ENST00000536336.5_1_11:18633859-18655855:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25347900390625	3	417.231523	1248.67274	-1.8947	-0.00079054	1.655	0.00069054	-0.23968	-0.0001	417.2321283414644	36.432	1.3504	36.455	35.718	37.069	0.023624					59	37	3	0	0	0	0.37624	1	1904	1904		27.047	12.354	1	1322200			40577	7246	27052	27064	46151	46151					0.058350167571234124
PFPYNSKMKKA	11	Unmodified	_PFPYNSKMKKA_					0	0	0		ENST00000460076.1_1_1:173819527-173821075:+|nuORF	ENST00000460076.1_1_1:173819527-173821075:+|nuORF	ENST00000460076.1_1_1:173819527-173821075:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.5699768066406	3	437.569036	1309.68528	-0.6351	-0.0002779	2.8875	0.0012635	2.2524	0.00098557	437.9045428950401	34.711	0.64537	34.655	34.401	35.047	-0.056385					31	14	3	0	0	0	0.68431	1	2195	2195		34.087	4.5358	1	113570			40578	12003	27053	27065	46152	46152					0.042822921051310914
PFPYNSKMKKA	11	Unmodified	_PFPYNSKMKKA_					0	0	0		ENST00000460076.1_1_1:173819527-173821075:+|nuORF	ENST00000460076.1_1_1:173819527-173821075:+|nuORF	ENST00000460076.1_1_1:173819527-173821075:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	437.569036	1309.68528	0.35993	0.0001575	1.6428	0.00071885	2.0027	0.00087634	437.56961237736607	34.275	0.5778	34.485	34.192	34.769	0.21003	-0.08889	-0.00094029	NaN	34.087	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	258390			40579	12003	27053	27065							0.042822921051310914
PFQGQNCPSHP	11	Carbamidomethyl (C)	_PFQGQNC(Carbamidomethyl (C))PSHP_	PFQGQNC(1)PSHP		PFQGQNC(46)PSHP		0	1	0		ENSG00000256762|ENST00000537309|STH	ENSG00000256762|ENST00000537309|STH	ENSG00000256762|ENST00000537309|STH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	635.2809448242188	2	634.777479	1267.5404	0.47901	0.00030407	-0.67294	-0.00042717	-0.19393	-0.0001231	634.7769229054138	50.349	0.97601	50.394	49.77	50.746	0.044327					46	28	2	0	0	0	0.58425	1	3951	3951		45.972	7.2186	1	173620			40580	8901	27054	27066	46153	46153	111				-0.08266376042001866
PFQPAEESV	9	Unmodified	_PFQPAEESV_					0	0	0		ENSG00000120370|ENST00000367763|GORAB	ENSG00000120370|ENST00000367763|GORAB	ENSG00000120370|ENST00000367763|GORAB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2426452636719	2	502.24019	1002.46583	-0.2542	-0.00012767	-0.62913	-0.00031597	-0.88333	-0.00044364	502.2397768469129	45.504	0.39854	46.399	46.169	46.567	0.89542					11	9	2	0	0	0	0.20789	1	4252	4252		21.96	0	1	146420			40581	3128	27055	27067	46154	46154					-0.03530815581711977
PFRFGKRPR	9	Unmodified	_PFRFGKRPR_					0	0	0			REV__ENST00000412331.6_1_22:38245308-38245380:+|nuORF	REV__ENST00000412331.6_1_22:38245308-38245380:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	580.8414916992188	2	580.843616	1159.67268	-0.77464	-0.00044995	-4.3546	-0.0025294	-5.1293	-0.0029793	580.8409079649531	69.999	0.8299	69.999	69.758	70.588	0					106	43	3	0	0	0	0.67345	1	6256	6256		42.396	14.514	1	7674300	+		40582	26378	27056	27068	46155	46155					0.09923061547806356
PFRKAPPTL	9	Unmodified	_PFRKAPPTL_					0	0	0		ENST00000487903.5_1_13:113537693-113537786:+|nuORF	ENST00000487903.5_1_13:113537693-113537786:+|nuORF	ENST00000487903.5_1_13:113537693-113537786:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8080444335938	2	513.808377	1025.6022	0.35777	0.00018383	0.79125	0.00040655	1.149	0.00059038	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.7932	1	3949	3949		23.042	0	1	1443600			40583	12613	27057	27069	46156	46156					0.09042343439477918
PFRLLHVT	8	Unmodified	_PFRLLHVT_					0	0	0		ENSG00000152207|ENST00000682523|CYSLTR2	ENSG00000152207|ENST00000682523|CYSLTR2	ENSG00000152207|ENST00000682523|CYSLTR2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7951354980469	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.274	1	58.308	57.808	58.808	0.033905								0	0	0	0.30125	1	5339	5339		20.482	1.1219	1				40584	5160	27058	27070	46157	46157					0.08446074267999393
PFRPLRARVKL	11	Unmodified	_PFRPLRARVKL_					0	0	0			REV__nc|ENSG00000169247|Q8TF17-3|SH3TC2	REV__nc|ENSG00000169247|Q8TF17-3|SH3TC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.62457275390625	3	451.626096	1351.85646	0.15956	7.2063E-05	-3.9432	-0.0017808	-3.7836	-0.0017088	451.6242107396296	45.487	0.89812	45.468	44.968	45.866	-0.018585					42	20	3	0	0	0	0.75906	1	3609	3609		20.03	1.4994	1	100310	+		40585	30019	27059	27071	46158	46158					0.19460410258625416
PFRQLVPFPV	10	Unmodified	_PFRQLVPFPV_					0	0	0			REV__nc|ENSG00000176160|Q4G112-2|HSF5	REV__nc|ENSG00000176160|Q4G112-2|HSF5	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	600.3819580078125	2	600.350409	1198.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.36	1	23.413	22.913	23.913	0.05291								0	0	0	0.45132	1	742	742		21.96	1.9631	1		+		40586	22113	27060	27072	46159	46159					0.09486874536355572
PFRQVLQP	8	Unmodified	_PFRQVLQP_					0	0	0		ENST00000421692.5_2_6:30003742-30025305:-|nuORF;ENST00000431012.5_1_6:30024744-30025305:-|nuORF	ENST00000421692.5_2_6:30003742-30025305:-|nuORF	ENST00000421692.5_2_6:30003742-30025305:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7922668457031	2	492.784902	983.55525	-1.2868	-0.00063411	-2.2383	-0.001103	-3.5251	-0.0017371	492.7837659530601	43.522	0.27747	43.972	43.766	44.043	0.45024					9	6	2	0	0	0	0.4196	1	3910	3910		26.796	0	1	117630			40587	11468	27061	27073	46160	46160					0.06281483888335515
PFSALLRLP	9	Unmodified	_PFSALLRLP_					0	0	0		ENST00000400900.6_1_1:10490512-10490572:+|nuORF	ENST00000400900.6_1_1:10490512-10490572:+|nuORF	ENST00000400900.6_1_1:10490512-10490572:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3140869140625	2	507.310752	1012.60695	1.0259	0.00052047	2.018	0.0010238	3.0439	0.0015442	507.31162994736894	63.037	2.7485	63.591	62.907	65.655	0.55449					132	65	4	0	0	0	0.58668	1	6865	6865		47.657	5.2612	1	3121800			40588	11229	27062	27074	46161	46161					0.10115227582218722
PFSCKEPLF	9	Carbamidomethyl (C)	_PFSC(Carbamidomethyl (C))KEPLF_	PFSC(1)KEPLF		PFSC(57)KEPLF		0	1	0		ENST00000521844.1_1_8:8861643-8861781:+|nuORF	ENST00000521844.1_1_8:8861643-8861781:+|nuORF	ENST00000521844.1_1_8:8861643-8861781:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.7723388671875	2	562.775885	1123.53722	-1.2635	-0.00071106	-2.8087	-0.0015807	-4.0722	-0.0022917	562.7744138634677	63.921	0.64169	63.92	63.699	64.341	-0.00078583					40	22	2	0	0	0	0.41566	1	5961	5961		56.721	7.2795	1	190150			40589	13178	27063	27075	46162	46162	176				-0.019610191487117845
PFSEISISSEL	11	Unmodified	_PFSEISISSEL_					0	0	0		ENSG00000128908|ENST00000648947|INO80	ENSG00000128908|ENST00000648947|INO80	ENSG00000128908|ENST00000648947|INO80	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8059692382812	2	604.805894	1207.59723	-0.029454	-1.7814E-05	0.35966	0.00021752	0.33021	0.00019971	604.8059425597291	78.892	0.76372	79.441	79.107	79.871	0.54945					43	17	4	0	0	0	0.25092	1	9060	9060		76.774	0.60445	1	656990			40590	3566	27064	27076	46163	46163					0.0017394999551925139
PFSFSVLFY	9	Unmodified	_PFSFSVLFY_					0	0	0		ENST00000546676.1_1_12:50529254-50529473:-|nuORF	ENST00000546676.1_1_12:50529254-50529473:-|nuORF	ENST00000546676.1_1_12:50529254-50529473:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.7869262695312	2	553.781493	1105.54843	-1.22	-0.00067562	-2.4591	-0.0013618	-3.6791	-0.0020374	553.7799402386626	58.748	0.50238	59.14	58.857	59.359	0.39209					33	11	3	0	0	0	0.31972	1	6184	6184		63.306	3.188	1	640100			40591	13592	27065	27077	46164	46164					-0.00011873782887050766
PFSSRTSPPN	10	Unmodified	_PFSSRTSPPN_					0	0	0			REV__ENSG00000146373|ENST00000521654|RNF217	REV__ENSG00000146373|ENST00000521654|RNF217	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.316650390625	2	545.269813	1088.52507	0.1512	8.2447E-05	-1.5412	-0.00084035	-1.39	-0.00075791	545.2687539354292	90.05	0.29568	90.263	90.126	90.422	0.21271					8	6	2	0	0	0	0.37624	1	9022	9022		26.693	0	1	37772	+		40592	20009	27066	27078	46165	46165					-0.015649195674996008
PFSVVPIVM	9	Unmodified	_PFSVVPIVM_					0	0	0		nc|ENSG00000136709|Q9C0J8-2|WDR33	nc|ENSG00000136709|Q9C0J8-2|WDR33	nc|ENSG00000136709|Q9C0J8-2|WDR33	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7799377441406	2	494.780439	987.546325	-0.98597	-0.00048784	1.0575	0.00052323	0.071529	3.5391E-05	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.7932	1	8176	8176		26.796	2.5934	1	385180			40593	14940	27067	27079	46166	46166					0.05205374207650948
PFSVVPIVM	9	Unmodified	_PFSVVPIVM_					0	0	0		nc|ENSG00000136709|Q9C0J8-2|WDR33	nc|ENSG00000136709|Q9C0J8-2|WDR33	nc|ENSG00000136709|Q9C0J8-2|WDR33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.77978515625	2	494.780439	987.546325	-1.0037	-0.00049663	0.48485	0.00023989	-0.5189	-0.00025674	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.7932	1	8497	8497		26.796	0.10319	1	265620			40594	14940	27067	27079	46167	46167					0.05205374207650948
PFTATHGLPR	10	Unmodified	_PFTATHGLPR_					0	0	0		ENST00000478241.6_2_12:56223574-56223930:+|nuORF	ENST00000478241.6_2_12:56223574-56223930:+|nuORF	ENST00000478241.6_2_12:56223574-56223930:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.2155151367188	2	548.79854	1095.58253	-0.23728	-0.00013022	-0.078872	-4.3285E-05	-0.31616	-0.00017351	548.798050332863	54.41	1.0093	54.816	54.319	55.328	0.40663					52	23	3	0	0	0	0.37624	1	5603	5603		24.519	7.1542	1	809030			40595	12379	27068	27080	46168	46168					0.038559674286943846
PFTHVGSKLA	10	Unmodified	_PFTHVGSKLA_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024466	REV__CON__ENSEMBL:ENSBTAP00000024466	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.7931518554688	2	528.795466	1055.57638	0.32349	0.00017106	-4.1241	-0.0021808	-3.8006	-0.0020098	528.7931534014222	36.129	0.71097	36.069	35.752	36.463	-0.060337					57	20	4	0	0	0	0.54701	1	1959	1959		52.937	8.8199	1	620290	+	+	40596	15964	27069	27081	46169	46169					0.0508144919717779
PFTLTMILD	9	Unmodified	_PFTLTMILD_					0	0	0			REV__ENSG00000138271|ENST00000260843|GPR87	REV__ENSG00000138271|ENST00000260843|GPR87	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.2500610351562	2	525.780636	1049.54672	0.72711	0.0003823	2.6227	0.001379	3.3499	0.0017613	525.7819246722521	51.048	0.74446	51.483	50.873	51.617	0.43505					26	17	2	0	0	0	0.20789	1	5003	5003		45.952	0	1	286960	+		40597	19453	27070	27082	46170	46170					0.023927491368112896
PFTLTMILD	9	Unmodified	_PFTLTMILD_					0	0	0			REV__ENSG00000138271|ENST00000260843|GPR87	REV__ENSG00000138271|ENST00000260843|GPR87	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2503051757812	2	525.780636	1049.54672	0.96512	0.00050744	2.6024	0.0013683	3.5676	0.0018758	525.7815405386606	49.898	1.0236	50.743	50.313	51.336	0.845					37	24	2	0	0	0	0.20789	1	4970	4970		30.504	0	1	309740	+		40598	19453	27070	27082	46171	46171					0.023927491368112896
PFTVKGAS	8	Unmodified	_PFTVKGAS_					0	0	0			REV__ENSG00000204616|ENST00000376734|TRIM31	REV__ENSG00000204616|ENST00000376734|TRIM31	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9300537109375	2	403.723978	805.433404	0.03723	1.503E-05	1.7869	0.00072143	1.8242	0.00073646	403.72457398511375	47.57	0.42982	47.561	47.26	47.69	-0.0093269					20	13	2	0	0	0	0.4196	1	3873	3873		20.947	0	1	77914	+		40599	23510	27071	27083	46172	46172					0.022904418059511045
PFVDEDTVLK	10	Unmodified	_PFVDEDTVLK_					0	0	0			REV__nc|ENSG00000182208|Q70IA6-2|MOB2	REV__nc|ENSG00000182208|Q70IA6-2|MOB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	581.80322265625	2	581.803154	1161.59175	-0.52283	-0.00030418	1.8247	0.0010616	1.3019	0.00075745	581.8040900175316	64.716	0.90666	64.754	64.351	65.257	0.037857					89	29	4	0	0	0	0.74274	1	5688	5688		42.396	5.9494	1	1330600	+		40600	22509	27072	27084	46173	46173					0.017422712036932353
PFVFVLSPL	9	Unmodified	_PFVFVLSPL_					0	0	0		ENST00000442760.2_1_13:45914489-45915204:-|nuORF	ENST00000442760.2_1_13:45914489-45915204:-|nuORF	ENST00000442760.2_1_13:45914489-45915204:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8038024902344	2	509.802229	1017.5899	-0.054506	-2.7787E-05	2.9884	0.0015235	2.9339	0.0014957	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.76996	1	8525	8525		33.516	0.70317	1	828920			40601	11796	27073	27085	46174	46174					0.08181306976428004
PFVVHPQT	8	Unmodified	_PFVVHPQT_					0	0	0			REV__ENSG00000177992|ENST00000325643|SPATA31E1	REV__ENSG00000177992|ENST00000325643|SPATA31E1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.2542724609375	2	462.750527	923.486502	-0.7843	-0.00036294	0.51895	0.00024014	-0.26536	-0.00012279	462.75053665918585	47.326	0.48594	47.299	47.027	47.513	-0.026737					23	14	2	0	0	0	0.87922	1	3960	3960		31.955	0.42505	1	200280	+		40602	22244	27074	27086	46175	46175					0.021698195886074245
PFWATGRAGHP	11	Unmodified	_PFWATGRAGHP_					0	0	0		ENST00000572010.5_1_16:67995523-68003085:-|nuORF	ENST00000572010.5_1_16:67995523-68003085:-|nuORF	ENST00000572010.5_1_16:67995523-68003085:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.8020629882812	2	598.801614	1195.58868	-0.77716	-0.00046537	-0.058307	-3.4915E-05	-0.83547	-0.00050028	598.8013448272425	63.345	0.56187	63.345	63.143	63.704	0					43	24	2	0	0	0	0.63176	1	5549	5549		40.778	5.6261	1	108740			40603	14006	27075	27087	46176	46176					-0.0012951433975558757
PFYHLAIKKPK	11	Unmodified	_PFYHLAIKKPK_					0	0	0			REV__ENST00000503755.5_1_5:87502254-87524301:-|nuORF	REV__ENST00000503755.5_1_5:87502254-87524301:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.7770690917969	3	447.939569	1340.79688	0.29716	0.00013311	2.8479	0.0012757	3.1451	0.0014088	448.2754184750089	50.52	0.90244	50.57	49.929	50.831	0.049896					29	26	2	0	0	0	0.17294	1	3894	3894		19.263	0	1	114390	+		40604	27848	27076	27088	46177	46177					0.14011094524562395
PFYWLLDD	8	Unmodified	_PFYWLLDD_					0	0	0		ENST00000557373.1_1_14:35344023-35344692:+|nuORF	ENST00000557373.1_1_14:35344023-35344692:+|nuORF	ENST00000557373.1_1_14:35344023-35344692:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7222290039062	2	534.755475	1067.4964	-0.24016	-0.00012843	4.0457	0.0021635	3.8055	0.002035	535.2587068784418	65.794	0.51604	66.347	66.125	66.641	0.5526					21	13	2	0	0	0	0.4196	1	7187	7187		13.775	0	1	243630			40605	13770	27077	27089	46178	46178					-0.03465037196679077
PGAAAASQDP	10	Unmodified	_PGAAAASQDP_					0	0	0			REV__ENSG00000123144|ENST00000242784|TRIR	REV__ENSG00000123144|ENST00000242784|TRIR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7449035644531	2	442.709057	883.40356	-1.1576	-0.00051248	-0.58339	-0.00025827	-1.741	-0.00077075	442.71082908166835	89.13	0.20515	89.6	89.435	89.64	0.47069					5	4	2	0	0	0	0.37624	1	10537	10537		26.693	0	1	23984	+		40606	18528	27078	27090	46179	46179					-0.04280541930052095
PGAAARRL	8	Unmodified	_PGAAARRL_					0	0	0		ENSG00000206557|ENST00000383763|TRIM71	REV__ENST00000496460.5_1_9:130494315-130497584:-|nuORF;ENSG00000206557|ENST00000383763|TRIM71;REV__nc|ENSG00000126254|Q9BTD8-3|RBM42	REV__ENST00000496460.5_1_9:130494315-130497584:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24755859375	2	406.248486	810.48242	2.7178	0.0011041	-2.1477	-0.00087251	0.57008	0.0002316	406.24748869064086	111.72	0.8214	111.69	111.25	112.07	-0.025414					71	31	3	0	0	0	0.81548	1	12339	12339		20.482	5.8177	1	80466			40607	27751;8561;29827	27079	27091	46180	46180					0.06959774885547176
PGAAGPARDR	10	Unmodified	_PGAAGPARDR_					0	0	0			REV__ENSG00000178761|ENST00000357635|FAM219B	REV__ENSG00000178761|ENST00000357635|FAM219B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.25732421875	2	484.25704	966.499526	0.54374	0.00026331	2.3314	0.001129	2.8751	0.0013923	484.25803837349594	26.204	0.58086	26.25	25.967	26.548	0.045509					23	14	2	0	0	0	0.85939	1	1104	1104		23.042	3.0457	1	51199	+		40608	22294	27080	27092	46181	46181					0.014936507007064392
PGAAQRKL	8	Unmodified	_PGAAQRKL_					0	0	0		ENSG00000175513|ENST00000532620|TSGA10IP	ENSG00000175513|ENST00000532620|TSGA10IP	ENSG00000175513|ENST00000532620|TSGA10IP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.75457763671875	2	420.756144	839.497735	0.012717	5.3507E-06	-2.3289	-0.00097989	-2.3162	-0.00097454	420.7550362120359	20.612	1.2168	20.688	19.803	21.02	0.07585					93	60	2	0	0	0	0.81724	1	525	525		14.664	0.88877	1	151820			40609	7023	27081	27093	46182	46182					0.07156641682752252
PGACQSTGS	9	Unmodified	_PGACQSTGS_					0	0	0			REV__ENST00000541544.1_1_11:71936127-71939670:+|nuORF	REV__ENST00000541544.1_1_11:71936127-71939670:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.17059326171875	2	404.16871	806.322867	0.53213	0.00021507	2.6453	0.0010691	3.1774	0.0012842	404.1699082116052	78.324	2.0905	78.461	78.03	80.121	0.13667					171	70	5	0	0	0	0.7932	1	7486	7486		24.203	1.1603	1	7251300	+		40610	28486	27082	27094	46183	46183					-0.08804146244585809
PGAECDEC	8	Unmodified	_PGAECDEC_					0	0	0			REV__nc|ENSG00000188554|Q14596-2|NBR1	REV__nc|ENSG00000188554|Q14596-2|NBR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.17572021484375	2	412.133479	822.252404	0.36441	0.00015018	3.7547	0.0015474	4.1191	0.0016976	412.13557488401267	95.35	0.39909	95.77	95.587	95.986	0.41963					13	9	3	0	0	0	0.4196	1	11436	11436		14.664	9.9823	1	205740	+		40611	23010	27083	27095	46184	46184					-0.16583187624576112
PGAGIRAQN	9	Unmodified	_PGAGIRAQN_					0	0	0		nc|ENSG00000158488|P15812-13|CD1E;nc|ENSG00000158488|P15812-3|CD1E;nc|ENSG00000158488|P15812-4|CD1E;nc|ENSG00000158488|P15812-2|CD1E;ENSG00000158488|ENST00000368167|CD1E	nc|ENSG00000158488|P15812-13|CD1E	nc|ENSG00000158488|P15812-13|CD1E	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24072265625	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.67235	1	7581	7581		42.474	0.078325	1	716910			40612	5484	27084	27096	46185	46185					0.021228632976999506
PGAGIRAQN	9	Unmodified	_PGAGIRAQN_					0	0	0		nc|ENSG00000158488|P15812-13|CD1E;nc|ENSG00000158488|P15812-3|CD1E;nc|ENSG00000158488|P15812-4|CD1E;nc|ENSG00000158488|P15812-2|CD1E;ENSG00000158488|ENST00000368167|CD1E	nc|ENSG00000158488|P15812-13|CD1E	nc|ENSG00000158488|P15812-13|CD1E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2408447265625	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.76996	2	7836	7836;7872		33.516	1.5607	1	968500			40613	5484	27084	27096	46186;46187	46186					0.021228632976999506
PGAGPPPPAS	10	Unmodified	_PGAGPPPPAS_					0	0	0			REV__nc|ENSG00000001617|Q13275-2|SEMA3F	REV__nc|ENSG00000001617|Q13275-2|SEMA3F	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2190246582031	2	424.21906	846.423567	1.9084	0.00080956	-2.9079	-0.0012336	-0.99957	-0.00042404	424.21773029200483	100.79	1.277	101.09	100.26	101.54	0.2999					57	33	3	0	0	0	0.84112	1	12204	12204		37.159	2.9866	1	900380	+		40614	16041	27085	27097	46188	46188					-0.005787461994259502
PGAGVRRV	8	Unmodified	_PGAGVRRV_					0	0	0		ENST00000478021.1_1_17:27071820-27071916:+|nuORF	ENST00000478021.1_1_17:27071820-27071916:+|nuORF	ENST00000478021.1_1_17:27071820-27071916:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24847412109375	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.81548	1	10351	10351		20.482	0	1	28266000			40615	12373	27086	27098	46189	46189					0.06959774885558545
PGAGVRRV	8	Unmodified	_PGAGVRRV_					0	0	0		ENST00000478021.1_1_17:27071820-27071916:+|nuORF	ENST00000478021.1_1_17:27071820-27071916:+|nuORF	ENST00000478021.1_1_17:27071820-27071916:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.24859619140625	2	406.248486	810.48242	-1.235	-0.0005017	1.527	0.00062034	0.29202	0.00011863	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.82464	1	10444	10444		21.702	0	1	38125000			40616	12373	27086	27098	46190	46190					0.06959774885558545
PGAIIPGQTGN	11	Unmodified	_PGAIIPGQTGN_					0	0	0		nc|ENSG00000169031|Q01955-2|COL4A3;nc|ENSG00000169031|Q01955-5|COL4A3;nc|ENSG00000169031|Q01955-4|COL4A3;nc|ENSG00000169031|Q01955-3|COL4A3;ENSG00000169031|ENST00000396578|COL4A3;ENST00000471862.1_1_2:228162448-228168961:+|nuORF	nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.77490234375	2	512.774731	1023.53491	-0.41052	-0.0002105	-0.58572	-0.00030034	-0.99624	-0.00051085	512.7745322883873	45.216	0.61684	45.228	44.942	45.559	0.012058					32	14	3	0	0	0	0.61369	1	3242	3242		42.864	2.0861	1	362590			40617	15084	27087	27099	46191	46191					0.024082684378640806
PGALEVLL	8	Unmodified	_PGALEVLL_					0	0	0			REV__ENST00000370793.5_1_1:78211275-78225441:-|nuORF	REV__ENST00000370793.5_1_1:78211275-78225441:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2472229003906	2	406.249829	810.485105	-1.9274	-0.00078302	-1.0619	-0.00043141	-2.9894	-0.0012144	406.2493147377016	111.43	0.80137	111.41	111.05	111.85	-0.019882					56	30	2	0	0	0	0.82464	1	11886	11886		21.702	1.2205	1	107510	+		40618	25667	27088	27100	46192	46192					0.07228185499855044
PGAPCPPVQ	9	Unmodified	_PGAPCPPVQ_					0	0	0			REV__ENST00000377735.7_1_19:46286802-46287057:-|nuORF	REV__ENST00000377735.7_1_19:46286802-46287057:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.2139892578125	2	433.215463	864.416374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.857	1	17.374	16.874	17.874	-0.48256								0	0	0	0.29299	1	313	313		33.516	5.2613	1		+		40619	25874	27089	27101	46193	46193					-0.021258020715094972
PGAQGSGCF	9	Unmodified	_PGAQGSGCF_					0	0	0		ENST00000380599.8_1_17:7365104-7365191:-|nuORF	ENST00000380599.8_1_17:7365104-7365191:-|nuORF	ENST00000380599.8_1_17:7365104-7365191:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.1757507324219	2	412.173795	822.333038	1.9446	0.00080153	2.2146	0.00091281	4.1593	0.0017143	412.1748947386634	95.507	1.9933	95.449	94.85	96.843	-0.057526					113	46	5	0	0	0	0.77546	1	10237	10237		31.955	2.8053	1	1987400			40620	10925	27090	27102	46194	46194					-0.08523538519352769
PGAQGSGCF	9	Unmodified	_PGAQGSGCF_					0	0	0		ENST00000380599.8_1_17:7365104-7365191:-|nuORF	ENST00000380599.8_1_17:7365104-7365191:-|nuORF	ENST00000380599.8_1_17:7365104-7365191:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.1756896972656	2	412.173795	822.333038	0.68034	0.00028042	3.535	0.001457	4.2153	0.0017374	412.17540320072595	94.733	2.5486	94.896	94.33	96.878	0.16307					175	60	5	0	0	0	0.77546	1	9685	9685		31.955	2.1133	1	14144000			40621	10925	27090	27102	46195	46195					-0.08523538519352769
PGAQGSGCF	9	Unmodified	_PGAQGSGCF_					0	0	0		ENST00000380599.8_1_17:7365104-7365191:-|nuORF	ENST00000380599.8_1_17:7365104-7365191:-|nuORF	ENST00000380599.8_1_17:7365104-7365191:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.1757507324219	2	412.173795	822.333038	2.147	0.00088493	0.97777	0.00040301	3.1247	0.0012879	412.1750523401702	95.065	5.5127	95.497	94.562	100.08	0.4324					346	134	6	0	0	0	0.3636	8	11477	11311;11477;11512;11525;11550;11561;11574;11606		60.294	25.093	1	146310000			40622	10925	27090	27102	46196;46197;46198;46199;46200;46201;46202;46203	46197					-0.08523538519352769
PGAQGSGCF	9	Unmodified	_PGAQGSGCF_					0	0	0		ENST00000380599.8_1_17:7365104-7365191:-|nuORF	ENST00000380599.8_1_17:7365104-7365191:-|nuORF	ENST00000380599.8_1_17:7365104-7365191:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.1759948730469	2	412.173795	822.333038	0.33777	0.00013922	2.789	0.0011496	3.1268	0.0012888	412.1757826354691	95.171	5.6015	95.591	94.66	100.26	0.41964					346	137	6	0	0	0	0.3636	6	11545	11496;11545;11581;11594;11629;11652		60.294	12.996	1	156020000			40623	10925	27090	27102	46204;46205;46206;46207;46208;46209	46205					-0.08523538519352769
PGAQGSGCF	9	Unmodified	_PGAQGSGCF_					0	0	0		ENST00000380599.8_1_17:7365104-7365191:-|nuORF	ENST00000380599.8_1_17:7365104-7365191:-|nuORF	ENST00000380599.8_1_17:7365104-7365191:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	412.173795	822.333038	-1.0718	-0.00044175	5.9063	0.0024344	4.8345	0.0019927	412.1761627673779	95.597	0.86455	95.597	95.051	95.916	0	0.11911	0.0021958	NaN	60.294	39	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	303610			40624	10925	27090	27102							-0.08523538519352769
PGASKYSAEAQ	11	Unmodified	_PGASKYSAEAQ_					0	0	0		ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.766845703125	2	554.767103	1107.51965	-0.22767	-0.0001263	1.2953	0.00071858	1.0676	0.00059228	554.7672775876852	34.559	0.95993	34.565	34.015	34.975	0.0063934					45	22	3	0	0	0	0.53361	1	2137	2137		49.536	3.5841	1	134960			40625	3006	27091	27103	46210	46210					-0.02980643149999196
PGASPRKK	8	Unmodified	_PGASPRKK_					0	0	0		nc|ENSG00000136715|Q9H0E3|SAP130;ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130	nc|ENSG00000136715|Q9H0E3|SAP130	nc|ENSG00000136715|Q9H0E3|SAP130	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.755126953125	2	420.756144	839.497735	-0.39386	-0.00016572	-1.7444	-0.00073398	-2.1383	-0.0008997	420.7553186920564	20.988	1.6049	20.924	19.96	21.565	-0.064743					109	65	2	0	0	0	0.81724	1	558	558		14.664	0.88877	1	83540			40626	4130	27092	27104	46211	46211					0.07156641682752252
PGATEDYS	8	Unmodified	_PGATEDYS_					0	0	0		nc|ENSG00000137868|Q9BX79-3|STRA6;chr15:74196120-74197338|30|11.87|0.22|5.78|-|ENST00000423167|STRA6,STRA6;ENSG00000137868|ENST00000395105|STRA6;nc|ENSG00000137868|Q9BX79-6|STRA6;nc|ENSG00000137868|Q9BX79-5|STRA6;nc|ENSG00000137868|Q9BX79-4|STRA6;chr15:74202282-74202418|48|45.25|0.4|6.84|-|ENST00000563965|STRA6,STRA6;ENST00000573456.5_1_15:74490196-74494813:-|nuORF;ENST00000574570.1_1_15:74488585-74495104:-|nuORF;nc|ENSG00000137868|Q9BX79-2|STRA6;chr15:74202282-74208800|28|17.75|0.19|6.52|-|ENST00000432245|STRA6,STRA6	nc|ENSG00000137868|Q9BX79-3|STRA6	nc|ENSG00000137868|Q9BX79-3|STRA6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1907043457031	2	420.174515	838.334478	-0.2478	-0.00010412	-1.9356	-0.00081327	-2.1834	-0.00091739	420.17342783916234	93.243	0.63496	93.693	93.4	94.035	0.44988					19	14	2	0	0	0	0.4196	1	11161	11161		52.299	15.271	1	62789			40627	191	27093	27105	46212	46212					-0.0911562594960742
PGATFCAQG	9	Unmodified	_PGATFCAQG_					0	0	0			REV__ENST00000317623.8_2_14:60558772-60558949:+|nuORF	REV__ENST00000317623.8_2_14:60558772-60558949:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.1915588378906	2	426.189445	850.364338	1.6375	0.00069788	2.7199	0.0011592	4.3574	0.0018571	426.19062560903467	97.031	1.3894	97.436	97.053	98.443	0.40498					97	33	4	0	0	0	0.76255	1	11645	11645		35.618	7.364	1	6310200	+		40628	24967	27094	27106	46213	46213					-0.06682965485265413
PGATGRRVLV	10	Unmodified	_PGATGRRVLV_					0	0	0			REV__ENST00000493246.5_2_7:7680343-7681136:+|nuORF	REV__ENST00000493246.5_2_7:7680343-7681136:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8175659179688	2	513.314358	1024.61416	0.3202	0.00016436	3.49	0.0017915	3.8102	0.0019558	513.3159908318282	43.284	1.4208	43.257	42.839	44.259	-0.026768					81	33	4	0	0	0	0.86718	1	3344	3344		27.882	2.3082	1	394850	+		40629	27688	27095	27107	46214	46214					0.10283960182641749
PGAVRKSQPPG	11	Unmodified	_PGAVRKSQPPG_					0	0	0		ENST00000561241.1_1_15:63340374-63341172:-|nuORF	ENST00000561241.1_1_15:63340374-63341172:-|nuORF	ENST00000561241.1_1_15:63340374-63341172:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	547.9952392578125	2	547.309272	1092.60399	0.17907	9.8009E-05	3.3968	0.0018591	3.5759	0.0019571	547.8126286580843	26.483	0.064753	26.592	26.551	26.615	0.10901					4	2	2	0	0	0	0.17387	1	1011	1011		45.972	14.017	1	26709			40630	13831	27096	27108	46215	46215					0.0613935245742141
PGAWAQGH	8	Unmodified	_PGAWAQGH_					0	0	0		ENSG00000170412|ENST00000392627|GPRC5C;nc|ENSG00000170412|Q9NQ84-2|GPRC5C	ENSG00000170412|ENST00000392627|GPRC5C	ENSG00000170412|ENST00000392627|GPRC5C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.17572021484375	2	412.195919	822.377286	0.67954	0.0002801	-3.2351	-0.0013335	-2.5555	-0.0010534	412.1952608373652	94.78	0.53832	94.944	94.533	95.071	0.16308					13	12	2	0	0	0	0.4196	1	9697	9697		29.842	0	1	53180			40631	6585	27097	27109	46216	46216					-0.04100766310864401
PGAYGPTY	8	Unmodified	_PGAYGPTY_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1936950683594	2	413.192511	824.370469	-0.086314	-3.5664E-05	1.7112	0.00070705	1.6249	0.00067139	413.1936016248627	77.941	2.7232	78.504	78.093	80.816	0.56332					177	64	5	0	0	0	0.87276	1	8956	8956		29.842	4.3914	1	6380300			40632	8832	27098	27110	46217	46217					-0.04874123982108358
PGCECVFGGE	10	Unmodified	_PGCECVFGGE_					0	0	0			REV__nc|ENSG00000167992|Q96DN2-2|VWCE	REV__nc|ENSG00000167992|Q96DN2-2|VWCE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.1937561035156	2	499.191328	996.368103	1.8635	0.00093024	1.5399	0.00076872	3.4034	0.001699	499.1920958208035	99.433	1.2224	99.796	99.447	100.67	0.36292					73	30	4	0	0	0	0.84112	1	12056	12056		37.159	2.9866	1	1640300	+		40633	21446	27099	27111	46218	46218					-0.13022663773699605
PGCSQGFVG	9	Unmodified	_PGCSQGFVG_					0	0	0			REV__ENSG00000156521|ENST00000287078|TYSND1	REV__ENSG00000156521|ENST00000287078|TYSND1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.1913757324219	2	426.189445	850.364338	2.8934	0.0012331	1.8215	0.00077632	4.7149	0.0020094	426.1900410770337	101.89	0.68951	102.22	101.93	102.62	0.3251					39	15	3	0	0	0	0.5393	1	12404	12404		50.025	2.1089	1	572890	+		40634	20495	27100	27112	46219	46219					-0.06682965485242676
PGCSQGFVG	9	Unmodified	_PGCSQGFVG_					0	0	0			REV__ENSG00000156521|ENST00000287078|TYSND1	REV__ENSG00000156521|ENST00000287078|TYSND1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	426.189445	850.364338	0.73382	0.00031275	3.6581	0.0015591	4.3919	0.0018718	426.1910190612556	101.95	0.66187	102.09	101.67	102.34	0.13523	-0.064997	0.00081133	NaN	50.025	18	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113880	+		40635	20495	27100	27112							-0.06682965485242676
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.18896484375	2	422.186903	842.359253	2.0292	0.0008567	2.3343	0.00098551	4.3635	0.0018422	422.18780289042525	101.44	0.86912	101.74	101.44	102.31	0.2999					44	25	2	0	0	0	0.73619	1	12289	12289		65.897	11.133	1	3258100			40636	12187	27101	27113	46220	46220					-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.188720703125	2	422.186903	842.359253	2.1776	0.00091935	1.1695	0.00049376	3.3471	0.0014131	422.1878859259197	104.59	0.97499	104.78	104.15	105.13	0.18888					78	24	4	0	0	0	0.93529	1	12706	12706		52.299	7.7681	1	2830900			40637	12187	27101	27113	46221	46221					-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.18890380859375	2	422.186903	842.359253	2.2164	0.00093575	1.5889	0.0006708	3.8053	0.0016065	422.18787253857664	105.23	1.5658	105.39	105.1	106.66	0.15583					118	51	5	0	0	0	0.60155	2	12809	12809;12818		71.378	16.613	1	2294800			40638	12187	27101	27113	46222;46223	46222					-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.18853759765625	2	422.186903	842.359253	3.7553	0.0015854	-0.69371	-0.00029288	3.0616	0.0012926	422.1872219331884	104.53	1.0794	104.76	104.25	105.33	0.2268					81	25	5	0	0	0	0.92973	1	12732	12732		50.025	5.4935	1	3012900			40639	12187	27101	27113	46224	46224					-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1889343261719	2	422.186903	842.359253	4.0203	0.0016973	0.68557	0.00028944	4.7059	0.0019868	422.18713437938374	105.17	1.5784	105.4	105.12	106.7	0.22681					80	51	2	0	0	0	0.79972	2	12860	12860;12920		62.978	10.679	1	2737200			40640	12187	27101	27113	46225;46226	46225					-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	422.186903	842.359253	-0.18543	-7.8287E-05	4.9533	0.0020912	4.7679	0.0020129	422.18887234040454	101.95	0.46613	101.97	101.77	102.24	0.01989	0.21972	0.0014238	NaN	65.897	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113180			40641	12187	27101	27113							-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	422.186903	842.359253	2.6715	0.0011279	2.3683	0.00099986	5.0397	0.0021277	422.1878392064705	101.94	0.6037	101.89	101.57	102.18	-0.049828	0.13762	-0.00075891	NaN	65.897	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88520			40642	12187	27101	27113							-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	422.186903	842.359253	3.0073	0.0012697	1.8363	0.00077527	4.8437	0.0020449	422.1875560068806	101.75	0.55	101.8	101.55	102.1	0.044823	0.047941	-0.0012081	NaN	65.897	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113790			40643	12187	27101	27113							-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	422.186903	842.359253	-1.7324	-0.00073139	6.6074	0.0027896	4.875	0.0020582	422.189524336004	105.34	0.6352	105.5	105.25	105.88	0.15924	0.02731	0.0044406	NaN	71.378	21	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98789			40644	12187	27101	27113							-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	422.186903	842.359253	0.73386	0.00030983	4.1905	0.0017692	4.9243	0.002079	422.1886847875357	105.43	0.60558	105.54	105.28	105.88	0.10766	0.060721	0.0023998	NaN	71.378	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121930			40645	12187	27101	27113							-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	422.186903	842.359253	0.73393	0.00030986	4.1343	0.0017454	4.8682	0.0020553	422.188565420036	101.45	0.78073	101.59	101.25	102.03	0.14352	-0.15585	0.00073227	NaN	65.897	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146490			40646	12187	27101	27113							-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	422.186903	842.359253	-1.8763	-0.00079214	6.3078	0.0026631	4.4315	0.0018709	422.18956162139364	105.48	0.54114	105.56	105.26	105.8	0.073112	0.078795	0.0041876	NaN	71.378	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105570			40647	12187	27101	27113							-0.06823269347876249
PGCTTDLH	8	Unmodified	_PGCTTDLH_					0	0	0		ENST00000470713.1_1_1:156697487-156698179:-|nuORF;ENST00000469074.1_1_1:156697487-156698213:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	ENST00000470713.1_1_1:156697487-156698179:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	422.186903	842.359253	-1.8763	-0.00079214	6.3279	0.0026716	4.4516	0.0018794	422.1894671162789	101.36	0.79861	101.52	101.24	102.04	0.15505	-0.23101	0.0025845	NaN	65.897	26	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	214330			40648	12187	27101	27113							-0.06823269347876249
PGDAPQPQ	8	Unmodified	_PGDAPQPQ_					0	0	0		nc|ENSG00000103495|P56270-2|MAZ	nc|ENSG00000103495|P56270-2|MAZ	nc|ENSG00000103495|P56270-2|MAZ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.912109375	2	405.193042	808.371532	0.071692	2.9049E-05	0.76259	0.000309	0.83428	0.00033805	405.1931594137161	30.754	0.66373	30.834	30.546	31.209	0.079834					18	14	2	0	0	0	0.4196	1	2041	2041		29.15	8.2026	1	66480			40649	14826	27102	27114	46227	46227					-0.04031909613195239
PGDAPQPQ	8	Unmodified	_PGDAPQPQ_					0	0	0		nc|ENSG00000103495|P56270-2|MAZ	nc|ENSG00000103495|P56270-2|MAZ	nc|ENSG00000103495|P56270-2|MAZ	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	405.193042	808.371532	-0.33748	-0.00013674	0.8188	0.00033177	0.48132	0.00019503	405.1932519225602	30.538	0.49651	30.491	30.229	30.726	-0.047062	-0.078587	0.00059811	NaN	29.15	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26181			40650	14826	27102	27114							-0.04031909613195239
PGDAPQPQ	8	Unmodified	_PGDAPQPQ_					0	0	0		nc|ENSG00000103495|P56270-2|MAZ	nc|ENSG00000103495|P56270-2|MAZ	nc|ENSG00000103495|P56270-2|MAZ	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	405.193042	808.371532	2.6389	0.0010693	-1.7108	-0.00069321	0.92812	0.00037607	405.1922657499879	30.555	0.49162	30.544	30.285	30.777	-0.010656	-0.024627	-0.0014519	NaN	29.15	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20796			40651	14826	27102	27114							-0.04031909613195239
PGDAPQPQ	8	Unmodified	_PGDAPQPQ_					0	0	0		nc|ENSG00000103495|P56270-2|MAZ	nc|ENSG00000103495|P56270-2|MAZ	nc|ENSG00000103495|P56270-2|MAZ	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	405.193042	808.371532	-1.9199	-0.00077791	1.933	0.00078323	0.013119	5.3158E-06	405.19388298257013	30.527	0.42808	30.59	30.378	30.806	0.063122	0.020927	0.001501	NaN	29.15	30	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47458			40652	14826	27102	27114							-0.04031909613195239
PGDAPQPQ	8	Unmodified	_PGDAPQPQ_					0	0	0		nc|ENSG00000103495|P56270-2|MAZ	nc|ENSG00000103495|P56270-2|MAZ	nc|ENSG00000103495|P56270-2|MAZ	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	405.193042	808.371532	0.12205	4.9453E-05	-0.18086	-7.3283E-05	-0.058812	-2.383E-05	405.19312017055813	30.389	0.36081	30.387	30.184	30.544	-0.0022545	-0.18222	-0.00021199	NaN	29.15	22	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39752			40653	14826	27102	27114							-0.04031909613195239
PGDGHHFG	8	Unmodified	_PGDGHHFG_					0	0	0			REV__ENSG00000162613|ENST00000370768|FUBP1	REV__ENSG00000162613|ENST00000370768|FUBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.17572021484375	2	412.177727	822.3409	-1.9151	-0.00078935	-3.8327	-0.0015797	-5.7478	-0.0023691	412.1764543351216	94.772	2.5614	94.974	94.403	96.965	0.20242					141	60	6	0	0	0	0.86791	1	9657	9657		28.254	0.37203	1	13873000	+		40654	20826	27103	27115	46228	46228					-0.07737643207576639
PGDGVRLR	8	Unmodified	_PGDGVRLR_					0	0	0			REV__ENST00000548989.5_1_14:105942370-105942691:+|nuORF	REV__ENST00000548989.5_1_14:105942370-105942691:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2513427734375	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.87479	1	8073	8073		30.504	1.3541	1	3292300	+		40655	28581	27104	27116	46229	46229					0.04839453677379879
PGDGVRLR	8	Unmodified	_PGDGVRLR_					0	0	0			REV__ENST00000548989.5_1_14:105942370-105942691:+|nuORF	REV__ENST00000548989.5_1_14:105942370-105942691:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2515869140625	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.89494	1	9086	9086		37.159	2.9866	1	2020200	+		40656	28581	27104	27116	46230	46230					0.04839453677379879
PGDTSLLV	8	Unmodified	_PGDTSLLV_					0	0	0			REV__ENSG00000175309|ENST00000308158|PHYKPL	REV__ENSG00000175309|ENST00000308158|PHYKPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.22149658203125	2	401.221268	800.427984	0.2725	0.00010933	2.1154	0.00084876	2.3879	0.00095809	401.2219254800666	30.719	1.1019	30.759	30.329	31.431	0.039999					46	24	3	0	0	0	0.84634	1	2030	2030		60.294	15.763	1	330060	+		40657	22059	27105	27117	46231	46231					0.01978718223483611
PGDTSLLV	8	Unmodified	_PGDTSLLV_					0	0	0			REV__ENSG00000175309|ENST00000308158|PHYKPL	REV__ENSG00000175309|ENST00000308158|PHYKPL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	401.221268	800.427984	2.5388	0.0010186	9.2838	0.0037248	11.823	0.0047435	401.2259707442874	30.963	0.40441	30.952	30.777	31.182	-0.010656	0.11341	0.0054201	NaN	60.294	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17074	+		40658	22059	27105	27117							0.01978718223483611
PGDTVTIT	8	Unmodified	_PGDTVTIT_					0	0	0		ENST00000557951.1_1_15:73996325-74000993:+|nuORF;nc|ENSG00000103855|Q5ZPR3-2|CD276;nc|ENSG00000103855|Q5ZPR3-4|CD276;ENSG00000103855|ENST00000318443|CD276;nc|ENSG00000103855|Q5ZPR3-3|CD276;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8	ENST00000557951.1_1_15:73996325-74000993:+|nuORF	ENST00000557951.1_1_15:73996325-74000993:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.212158203125	2	402.210901	802.407249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.305	1	25.264	24.764	25.764	-0.04117								0	0	0	0.29452	1	1057	1057		33.516	0	1				40659	2102	27106	27118	46232	46232					-0.0018587215619163544
PGDVTVKIAR	10	Unmodified	_PGDVTVKIAR_					0	0	0			REV__ENSG00000020633|ENST00000308873|RUNX3	REV__ENSG00000020633|ENST00000308873|RUNX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.31396484375	2	528.314023	1054.61349	-0.035772	-1.8899E-05	0.35061	0.00018523	0.31484	0.00016633	528.3142278244472	98.548	1.1039	98.598	98.087	99.191	0.04982					64	24	4	0	0	0	0.86218	1	10428	10428		32.812	0.85756	1	426950	+		40660	16237	27107	27119	46233	46233					0.08837120742941806
PGEEGPPGTAG	11	Unmodified	_PGEEGPPGTAG_					0	0	0			REV__ENST00000482722.5_1_1:40766856-40777859:-|nuORF	REV__ENST00000482722.5_1_1:40766856-40777859:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.71795654296875	2	484.719621	967.42469	0.76607	0.00037133	-3.3896	-0.001643	-2.6235	-0.0012717	484.71784448733064	98.881	4.1852	99.038	95.672	99.857	0.15659					143	97	2	0	0	0	0.66929	1	10360	10360		36.447	0.82846	1	472970	+		40661	16369	27108	27120	46234	46234					-0.060325766211803966
PGEIHCDAH	9	Unmodified	_PGEIHCDAH_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.7056884765625	2	489.708534	977.402514	-0.93828	-0.00045948	-4.4154	-0.0021622	-5.3536	-0.0026217	489.7062793713347	91.878	0.98328	92.341	91.977	92.96	0.46249					41	22	2	0	0	0	0.72402	1	10945	10945		38.806	1.647	1	707890	+		40662	23145	27109	27121	46235	46235					-0.08709079570610356
PGEKKVMVLKA	11	Unmodified	_PGEKKVMVLKA_					0	0	0			REV__ENSG00000138658|ENST00000505019|ZGRF1	REV__ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.5804138183594	3	400.577531	1198.71076	5.5428	0.0022203	1.9099	0.00076506	7.4527	0.0029854	400.57819432887953	111.82	0.52379	111.85	111.7	112.22	0.032707					48	18	4	0	0	0	0.71803	1	13569	13569		28.577	0	1	3019100	+		40663	19490	27110	27122	46236	46236					0.11935766627584599
PGELLTLI	8	Unmodified	_PGELLTLI_					0	0	0		nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2616271972656	2	428.262936	854.51132	-1.1356	-0.00048635	-1.7013	-0.00072859	-2.8369	-0.0012149	428.2621524287907	91.088	2.5476	91.088	90.477	93.025	0					222	59	5	0	0	0	0.86791	1	8880	8880		28.254	0	1	33233000			40664	8709	27111	27123	46237	46237					0.0782445467133357
PGELLTLI	8	Unmodified	_PGELLTLI_					0	0	0		nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2615661621094	2	428.262936	854.51132	-0.17868	-7.6523E-05	-2.7106	-0.0011609	-2.8893	-0.0012374	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.86791	1	9339	9339		28.254	6.5519	1	52688000			40665	8709	27111	27123	46238	46238					0.0782445467133357
PGELLTLI	8	Unmodified	_PGELLTLI_					0	0	0		nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.26202392578125	2	428.262936	854.51132	1.2297	0.00052665	-4.2128	-0.0018042	-2.9831	-0.0012775	428.26104076888095	90.552	2.3243	91.003	90.412	92.737	0.45058					198	55	5	0	0	0	0.86791	2	10697	10697;10721		28.254	4.0515	1	32404000			40666	8709	27111	27123	46239;46240	46239					0.0782445467133357
PGELLTLI	8	Unmodified	_PGELLTLI_					0	0	0		nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	nc|ENSG00000225697|Q9BXS9-6|SLC26A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2615966796875	2	428.262936	854.51132	-1.021	-0.00043726	-1.8984	-0.00081301	-2.9194	-0.0012503	428.26203928148993	90.556	2.3584	91.026	90.524	92.882	0.47068					198	56	5	0	0	0	0.86791	1	10749	10749		28.254	5.2118	1	38446000			40667	8709	27111	27123	46241	46241					0.0782445467133357
PGETLLVL	8	Unmodified	_PGETLLVL_					0	0	0			REV__ENST00000431775.1_1_20:1141504-1141783:+|nuORF	REV__ENST00000431775.1_1_20:1141504-1141783:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.25384521484375	2	421.255111	840.49567	-0.18708	-7.8807E-05	-2.5351	-0.0010679	-2.7222	-0.0011467	421.25387987106194	84.393	1.9611	84.46	83.811	85.772	0.067177					92	44	3	0	0	0	0.85277	1	8464	8464		25.45	4.9683	1	712040	+		40668	26625	27112	27124	46242	46242					0.06904168154278523
PGEVALLL	8	Unmodified	_PGEVALLL_					0	0	0			REV__ENSG00000148843|ENST00000369797|PDCD11	REV__ENSG00000148843|ENST00000369797|PDCD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2480773925781	2	406.249829	810.485105	-0.18684	-7.5904E-05	-2.4579	-0.00099852	-2.6447	-0.0010744	406.24872241647245	90.972	2.1991	91.041	90.513	92.712	0.069328					111	52	3	0	0	0	0.87276	1	9313	9313		29.842	1.5873	1	1239900	+		40669	20142	27113	27125	46243	46243					0.07228185499855044
PGEVFINKGK	10	Unmodified	_PGEVFINKGK_					0	0	0		nc|ENSG00000116560|P23246-2|SFPQ;ENSG00000116560|ENST00000357214|SFPQ	nc|ENSG00000116560|P23246-2|SFPQ	nc|ENSG00000116560|P23246-2|SFPQ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	544.8065185546875	2	544.808574	1087.60259	0.78335	0.00042678	-4.4681	-0.0024342	-3.6847	-0.0020075	544.8060162221166	24.686	0.87633	24.7	24.336	25.212	0.013996					110	42	4	0	0	0	0.37206	1	839	839		66.429	4.3219	1	1007500			40670	2926	27114	27126	46244	46244					0.062297183686723656
PGFGSFVD	8	Unmodified	_PGFGSFVD_					0	0	0		ENST00000589179.5_1_12:53590293-53590665:-|nuORF	ENST00000589179.5_1_12:53590293-53590665:-|nuORF	ENST00000589179.5_1_12:53590293-53590665:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1958312988281	2	413.192511	824.370469	0.36856	0.00015229	2.5751	0.001064	2.9436	0.0012163	413.19353569569154	84.288	3.3037	84.723	83.664	86.967	0.43538					144	80	2	0	0	0	0.884	1	9837	9837		33.516	1.5607	1	9340100			40671	14229	27115	27127	46245	46245					-0.04874123982085621
PGFKFTSK	8	Unmodified	_PGFKFTSK_					0	0	0		ENST00000439871.1_1_2:218925948-218930359:-|nuORF	ENST00000439871.1_1_2:218925948-218930359:-|nuORF	ENST00000439871.1_1_2:218925948-218930359:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7555236816406	2	456.252903	910.491253	-1.6868	-0.0007696	1.5765	0.00071928	-0.1103	-5.0324E-05	456.2528624469303	52.407	1.3098	52.407	51.831	53.141	0					69	34	3	0	0	0	0.86677	1	4313	4313		27.882	1.0861	1	84817			40672	11765	27116	27128	46246	46246					0.03242703731370966
PGFLSPGESCV	11	Unmodified	_PGFLSPGESCV_					0	0	0		ENST00000468090.5_1_21:45179541-45179850:+|nuORF	ENST00000468090.5_1_21:45179541-45179850:+|nuORF	ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8399658203125	2	546.755149	1091.49575	0.84869	0.00046403	2.1202	0.0011592	2.9689	0.0016233	547.2577797441351	100.77	0.1172	100.92	100.85	100.97	0.14352					4	2	2	0	0	0	0.17383	1	10542	10542		56.721	18.91	1	45829			40673	12170	27117	27129	46247	46247					-0.04634199908014125
PGGAGWGPGG	10	Unmodified	_PGGAGWGPGG_					0	0	0			REV__ENSG00000166189|ENST00000299238|HPS6	REV__ENSG00000166189|ENST00000299238|HPS6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2485046386719	2	406.687927	811.361301	-1.9271	-0.00078371	0.82828	0.00033685	-1.0988	-0.00044686	406.6902243574185	88.216	0.2443	88.386	88.211	88.455	0.16922					6	5	2	0	0	0	0.37624	1	8697	8697		26.796	17.326	1	19180	+		40674	21265	27118	27130	46248	46248					-0.051924725477533684
PGGDGFYL	8	Unmodified	_PGGDGFYL_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.19415283203125	2	413.192511	824.370469	0.53899	0.00022271	2.2804	0.00094224	2.8194	0.001165	413.1933573635661	78.618	3.0297	78.757	78.334	81.364	0.13883					156	98	2	0	0	0	0.88915	1	7501	7501		35.201	8.4046	1	973800			40675	7421	27119	27131	46249	46249					-0.048741239820969895
PGGDGFYL	8	Unmodified	_PGGDGFYL_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1934814453125	2	413.192511	824.370469	0.37594	0.00015534	1.3223	0.00054636	1.6982	0.00070169	413.1933424358141	82.469	1.3874	82.896	82.352	83.74	0.42663					91	33	5	0	0	0	0.86288	1	9615	9615		26.796	0	1	2821200			40676	7421	27119	27131	46250	46250					-0.048741239820969895
PGGDGFYL	8	Unmodified	_PGGDGFYL_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1936950683594	2	413.192511	824.370469	0.071072	2.9367E-05	1.54	0.00063633	1.6111	0.00066569	413.19345857081765	82.462	1.3534	82.936	82.432	83.785	0.47383					89	32	5	0	0	0	0.82464	1	9593	9593		21.702	0	1	2653900			40677	7421	27119	27131	46251	46251					-0.048741239820969895
PGGEQCPPT	9	Unmodified	_PGGEQCPPT_					0	0	0		ENST00000257215.9_1_11:61512188-61512554:+|nuORF	ENST00000257215.9_1_11:61512188-61512554:+|nuORF	ENST00000257215.9_1_11:61512188-61512554:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	443.1935729980469	2	443.192185	884.369817	1.0323	0.00045751	0.0080792	3.5806E-06	1.0404	0.00046109	443.19358441364795	98.369	0.7785	98.73	98.358	99.136	0.36136					63	18	4	0	0	0	0.73802	1	11852	11852		37.812	3.639	1	1242900			40678	9349	27120	27132	46252	46252					-0.07699286693468821
PGGEQCPPT	9	Unmodified	_PGGEQCPPT_					0	0	0		ENST00000257215.9_1_11:61512188-61512554:+|nuORF	ENST00000257215.9_1_11:61512188-61512554:+|nuORF	ENST00000257215.9_1_11:61512188-61512554:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	443.192185	884.369817	-1.371	-0.00060761	3.7911	0.0016802	2.4202	0.0010726	443.19474508094436	98.155	0.7097	98.383	97.995	98.705	0.22788	-0.23433	0.00094174	NaN	37.812	29	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66729			40679	9349	27120	27132							-0.07699286693468821
PGGEQCPPT	9	Unmodified	_PGGEQCPPT_					0	0	0		ENST00000257215.9_1_11:61512188-61512554:+|nuORF	ENST00000257215.9_1_11:61512188-61512554:+|nuORF	ENST00000257215.9_1_11:61512188-61512554:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	443.192185	884.369817	-1.7976	-0.0007967	8.2176	0.003642	6.4199	0.0028453	443.19473311038416	98.348	0.70933	98.544	98.244	98.953	0.19584	-0.073059	0.0048653	NaN	37.812	28	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51169			40680	9349	27120	27132							-0.07699286693468821
PGGEQCPPT	9	Unmodified	_PGGEQCPPT_					0	0	0		ENST00000257215.9_1_11:61512188-61512554:+|nuORF	ENST00000257215.9_1_11:61512188-61512554:+|nuORF	ENST00000257215.9_1_11:61512188-61512554:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	443.192185	884.369817	1.6403	0.00072698	-0.77265	-0.00034243	0.86767	0.00038455	443.1932984704765	98.434	0.77438	98.811	98.49	99.265	0.37678	0.19389	-0.0031035	NaN	37.812	61	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1189700			40681	9349	27120	27132							-0.07699286693468821
PGGGCRAAH	9	Unmodified	_PGGGCRAAH_					0	0	0		ENST00000497505.5_1_2:203879615-203880929:+|nuORF	ENST00000497505.5_1_2:203879615-203880929:+|nuORF	ENST00000497505.5_1_2:203879615-203880929:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.19366455078125	2	413.192854	824.371155	0.36856	0.00015229	1.7456	0.00072126	2.1141	0.00087354	413.19353569569154	84.288	3.3037	84.723	83.664	86.967	0.43538					144	80	2	0	0	0	0.7932	1	9778	9778		25.45	1.2474	1	9340100			40682	12808	27121	27133	46253	46253					-0.04805607814034829
PGGGGGPGDH	10	Unmodified	_PGGGGGPGDH_					0	0	0			REV__nc|ENSG00000152192|Q01851-2|POU4F1	REV__nc|ENSG00000152192|Q01851-2|POU4F1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.1702575683594	2	404.172641	806.33073	-1.8319	-0.00074042	-4.3741	-0.0017679	-6.2061	-0.0025083	404.17089024317255	78.364	3.0861	78.491	77.697	80.783	0.12695					160	99	2	0	0	0	0.86201	1	7419	7419		24.203	2.2429	1	7642900	+		40683	20287	27122	27134	46254	46254					-0.08018250932809678
PGGGGKAPVL	10	Unmodified	_PGGGGKAPVL_					0	0	0		chr12:53441792-53443487|15|40.8|0.75|5.76|+|0|PRR13,PRR13|1	chr12:53441792-53443487|15|40.8|0.75|5.76|+|0|PRR13,PRR13|1	chr12:53441792-53443487|15|40.8|0.75|5.76|+|0|PRR13,PRR13|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.7501525878906	2	426.750527	851.486502	0.17615	7.5171E-05	-0.60909	-0.00025993	-0.43295	-0.00018476	426.7498083241824	79.997	1.9435	80.524	79.423	81.366	0.52677					115	45	4	0	0	0	0.53935	1	9193	9193		53.351	8.8204	1	766440			40684	132	27123	27135	46255	46255					0.054818195886127796
PGGGLRVR	8	Unmodified	_PGGGLRVR_					0	0	0			REV__ENST00000576107.5_1_16:70497084-70500232:+|nuORF	REV__ENST00000576107.5_1_16:70497084-70500232:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7534484863281	2	406.248486	810.48242	3.1798	0.0012918	-2.835	-0.0011517	0.34482	0.00014008	406.2472019608831	118.01	0.77022	118.03	117.4	118.17	0.026466					37	25	2	0	0	0	0.80963	1	12942	12942		15.636	0	1	37448	+		40685	28992	27124	27136	46256	46256					0.06959774885558545
PGGGNRFAH	9	Unmodified	_PGGGNRFAH_					0	0	0			REV__ENSG00000143850|ENST00000272203|PLEKHA6	REV__ENSG00000143850|ENST00000272203|PLEKHA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7249755859375	2	456.725375	911.436198	0.54984	0.00025113	3.1745	0.0014499	3.7243	0.001701	456.7268924659608	77.435	0.69015	77.569	77.215	77.905	0.13478					42	30	2	0	0	0	0.77546	1	7274	7274		31.955	5.1588	1	68656	+		40686	19848	27125	27137	46257	46257					-0.023062900165314204
PGGGNRFAH	9	Unmodified	_PGGGNRFAH_					0	0	0			REV__ENSG00000143850|ENST00000272203|PLEKHA6	REV__ENSG00000143850|ENST00000272203|PLEKHA6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7276916503906	2	456.725375	911.436198	-0.16136	-7.3697E-05	4.2106	0.0019231	4.0492	0.0018494	456.72713160093247	76.69	0.8143	77.259	76.89	77.704	0.56835					40	25	2	0	0	0	0.67235	1	8737	8737		42.474	7.2737	1	345330	+		40687	19848	27125	27137	46258	46258					-0.023062900165314204
PGGGWQVH	8	Unmodified	_PGGGWQVH_					0	0	0		ENST00000595082.1_1_19:39727075-39727930:-|nuORF	ENST00000595082.1_1_19:39727075-39727930:-|nuORF	ENST00000595082.1_1_19:39727075-39727930:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.183837890625	2	419.203744	836.392936	-0.90561	-0.00037964	-4.3903	-0.0018404	-5.2959	-0.0022201	419.20214795743743	91.404	2.3142	91.875	91.442	93.756	0.47068					78	54	3	0	0	0	0.4196	1	10978	10978		44.531	5.7249	1	913400			40688	14327	27126	27138	46259	46259					-0.03180479793809354
PGGKRPGR	8	Unmodified	_PGGKRPGR_					0	0	0		ENST00000296564.8_2_5:5422898-5422991:+|nuORF	ENST00000296564.8_2_5:5422898-5422991:+|nuORF	ENST00000296564.8_2_5:5422898-5422991:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.1942138671875	2	412.746111	823.477669	0.5822	0.0002403	4.1181	0.0016997	4.7003	0.00194	412.74596177449115	83.984	0.99089	84.132	83.483	84.473	0.14793					30	22	2	0	0	0	0.4196	1	8094	8094		25.45	0	1	34210			40689	9740	27127	27139	46260	46260					0.05886890742806372
PGGMHRQL	8	Unmodified	_PGGMHRQL_					0	0	0			REV__ENSG00000113749|ENST00000636584|HRH2	REV__ENSG00000113749|ENST00000636584|HRH2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.3080749511719	2	448.231979	894.449405	-0.1453	-6.5126E-05	1.1846	0.00053097	1.0393	0.00046584	448.23331861701223	81.285	0.13071	81.35	81.273	81.404	0.064384					4	2	2	0	0	0	0.4196	1	7986	7986		28.254	14.479	1	14101	+		40690	18014	27128	27140	46261	46261					-0.0020417522879370154
PGGPKLSPLPL	11	Unmodified	_PGGPKLSPLPL_					0	0	0		ENST00000548882.5_1_12:56230822-56231236:-|nuORF	ENST00000548882.5_1_12:56230822-56231236:-|nuORF	ENST00000548882.5_1_12:56230822-56231236:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3277587890625	2	538.329142	1074.64373	0.8402	0.00045231	-4.254	-0.0022901	-3.4138	-0.0018378	538.3268220989208	104.45	1.2184	104.56	103.9	105.12	0.11684					92	29	4	0	0	0	0.17318	1	10994	10994		8.6937	0	1	1399300			40691	13626	27129	27141	46262	46262					0.10939479408125408
PGGPVRFV	8	Unmodified	_PGGPVRFV_					0	0	0		MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|26|2|sense	MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|26|2|sense	MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|26|2|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	414.76153564453125	2	414.739963	827.465373	3.0738	0.0012748	3.1932	0.0013243	6.267	0.0025992	414.74138309454474	88.248	0.23902	88.298	88.116	88.355	0.050415					9	5	2	0	0	0	0.4196	1	9060	9060		46.766	2.2354	1	97227			40692	14723	27130	27142	46263	46263					0.044738542797517766
PGGPVRFV	8	Unmodified	_PGGPVRFV_					0	0	0		MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|26|2|sense	MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|26|2|sense	MSTD-int_dup721|chr19:36385416-36386655:+|1.6019821859580925|0.2691231760170134|2.57|63.0|26|2|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	414.7616271972656	2	414.739963	827.465373	-1.9066	-0.00079074	-2.2661	-0.00093985	-4.1727	-0.0017306	414.73934047147446	88.225	0.40583	88.395	88.169	88.574	0.16923					11	9	2	0	0	0	0.4196	1	8698	8698		65.897	41.695	1	69493			40693	14723	27130	27142	46264	46264					0.044738542797517766
PGGQCPQHSS	10	Unmodified	_PGGQCPQHSS_					0	0	0			REV__ENSG00000140104|ENST00000547315|CLBA1	REV__ENSG00000140104|ENST00000547315|CLBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.2142028808594	2	499.21144	996.408328	2.1717	0.0010841	1.7025	0.0008499	3.8741	0.001934	499.21213277067704	100.28	1.0084	100.63	100.41	101.42	0.34591					37	24	3	0	0	0	0.8608	1	12178	12178		34.173	1.3601	1	308340	+		40694	19597	27131	27143	46265	46265					-0.09001981058929687
PGGQCPQHSS	10	Unmodified	_PGGQCPQHSS_					0	0	0			REV__ENSG00000140104|ENST00000547315|CLBA1	REV__ENSG00000140104|ENST00000547315|CLBA1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	499.21144	996.408328	2.1717	0.0010841	1.7025	0.0008499	3.8741	0.001934	499.21213277067704	100.28	1.0084	100.63	100.41	101.42	0.34591	-0.0089355	-0.00071022	NaN	34.173	37	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	308340	+		40695	19597	27131	27143							-0.09001981058929687
PGGRAPRP	8	Unmodified	_PGGRAPRP_					0	0	0			REV__ENST00000580513.1_1_17:63554840-63557252:-|nuORF	REV__ENST00000580513.1_1_17:63554840-63557252:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2329406738281	2	404.232836	806.45112	2.8761	0.0011626	-2.4963	-0.0010091	0.37984	0.00015354	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.86791	1	8627	8627		28.254	0	1	4761400	+		40696	29038	27132	27144	46266	46266					0.04015201851461825
PGGRAPRP	8	Unmodified	_PGGRAPRP_					0	0	0			REV__ENST00000580513.1_1_17:63554840-63557252:-|nuORF	REV__ENST00000580513.1_1_17:63554840-63557252:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.2321472167969	2	404.232836	806.45112	-0.39209	-0.00015849	0.40601	0.00016412	0.013927	5.6299E-06	404.23288491550113	84.848	3.8677	85.296	83.349	87.217	0.44736					164	94	4	0	0	0	0.85277	1	9985	9985		25.45	6.0902	1	3295900	+		40697	29038	27132	27144	46267	46267					0.04015201851461825
PGGRKRPG	8	Unmodified	_PGGRKRPG_					0	0	0			REV__ENSG00000179051|ENST00000375436|RCC2	REV__ENSG00000179051|ENST00000375436|RCC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7460632324219	2	412.746111	823.477669	0.59258	0.00024459	0.14054	5.8006E-05	0.73312	0.00030259	412.7459816855853	84.982	2.6893	85.131	84.474	87.163	0.14857					120	62	4	0	0	0	0.86288	1	8302	8302		26.796	1.3459	1	1216600	+		40698	22311	27133	27145	46268	46268					0.05886890742806372
PGGRNALH	8	Unmodified	_PGGRNALH_					0	0	0			REV__ENST00000494873.1_1_1:51702296-51736909:+|nuORF	REV__ENST00000494873.1_1_1:51702296-51736909:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.17840576171875	2	411.222469	820.430384	-0.79503	-0.00032694	-2.2587	-0.00092884	-3.0538	-0.0012558	411.2214229140872	86.986	1.1504	87.441	86.735	87.885	0.4543					35	27	2	0	0	0	0.4196	1	10250	10250		62.978	10.679	1	180940	+		40699	27723	27134	27146	46269	46269					0.01298611471793265
PGGRNALH	8	Unmodified	_PGGRNALH_					0	0	0			REV__ENST00000494873.1_1_1:51702296-51736909:+|nuORF	REV__ENST00000494873.1_1_1:51702296-51736909:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	411.222469	820.430384	0.61098	0.00025125	-1.2021	-0.00049431	-0.59108	-0.00024306	411.22179735882014	87.199	0.77031	87.348	86.784	87.554	0.14956	0.085952	0.00095166	NaN	62.978	30	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206290	+		40700	27723	27134	27146							0.01298611471793265
PGGRNALH	8	Unmodified	_PGGRNALH_					0	0	0			REV__ENST00000494873.1_1_1:51702296-51736909:+|nuORF	REV__ENST00000494873.1_1_1:51702296-51736909:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	411.222469	820.430384	-1.8752	-0.00077111	-4.3931	-0.0018065	-6.2682	-0.0025776	411.2199333136063	87.064	1.9656	87.229	85.639	87.604	0.16473	-0.033158	-0.0016728	NaN	62.978	67	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	222610	+		40701	27723	27134	27146							0.01298611471793265
PGGRPERA	8	Unmodified	_PGGRPERA_					0	0	0			REV__ENST00000583656.5_1_17:56591767-56591965:-|nuORF	REV__ENST00000583656.5_1_17:56591767-56591965:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2264709472656	2	420.227751	838.440949	-0.18786	-7.8944E-05	0.38594	0.00016218	0.19808	8.324E-05	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.8347	1	7285	7285		23.042	1.0826	1	279000	+		40702	29074	27135	27147	46270	46270					0.015265941262214255
PGGRQLRA	8	Unmodified	_PGGRQLRA_					0	0	0		nc|ENSG00000177663|Q96F46-2|IL17RA;ENSG00000177663|ENST00000319363|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2615051269531	2	427.751393	853.488233	-0.17954	-7.68E-05	-1.7099	-0.0007314	-1.8894	-0.0008082	427.75216745866635	91.858	0.51276	91.928	91.513	92.025	0.06987					15	11	2	0	0	0	0.4196	1	9448	9448		19.36	6.4008	1	35261			40703	7152	27136	27148	46271	46271					0.05562873397218482
PGGRRGLV	8	Unmodified	_PGGRRGLV_					0	0	0		ENST00000477629.1_1_3:58135593-58136214:+|nuORF	ENST00000477629.1_1_3:58135593-58136214:+|nuORF	ENST00000477629.1_1_3:58135593-58136214:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2490234375	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.56	1	115.54	115.04	116.04	-0.02433								0	0	0	0.30609	1	12797	12797		44.531	16.277	1				40704	12358	27137	27149	46272	46272					0.06959774885558545
PGGRSKAPN	9	Unmodified	_PGGRSKAPN_					0	0	0			REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24053955078125	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.76764	1	7653	7653		34.173	0.65696	1	968500	+		40705	21876	27138	27150	46273	46273					0.021228632976999506
PGGRVKLV	8	Unmodified	_PGGRVKLV_					0	0	0		ENSG00000126870|ENST00000407559|DYNC2I1	ENSG00000126870|ENST00000407559|DYNC2I1	ENSG00000126870|ENST00000407559|DYNC2I1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2669677734375	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.86288	1	2254	2254		26.796	7.4361	1	268720			40706	3476	27139	27151	46274	46274					0.10394116205179671
PGGSAQWH	8	Unmodified	_PGGSAQWH_					0	0	0			REV__ENSG00000114738|ENST00000621469|MAPKAPK3	REV__ENSG00000114738|ENST00000621469|MAPKAPK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.19110107421875	2	420.193377	838.372201	-1.8849	-0.00079204	-2.7295	-0.0011469	-4.6144	-0.001939	420.192116172397	93.945	2.7081	94.143	92.357	95.065	0.19827					82	64	2	0	0	0	0.92457	1	9504	9504		47.916	4.2896	1	1157900	+		40707	18060	27140	27152	46275	46275					-0.05345070173484601
PGGVEEHGPA	10	Unmodified	_PGGVEEHGPA_					0	0	0		ENSG00000178184|ENST00000353265|PARD6G	ENSG00000178184|ENST00000353265|PARD6G	ENSG00000178184|ENST00000353265|PARD6G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.22186279296875	2	475.222331	948.430109	0.16074	7.6388E-05	3.6697	0.0017439	3.8304	0.0018203	475.2239634085171	26.709	1.9087	26.533	25.72	27.628	-0.17559					69	42	2	0	0	0	0.777	1	1502	1502		40.573	9.0428	1	124270			40708	7190	27141	27153	46276	46276					-0.046168530387149076
PGGVRGIQRRR	11	Unmodified	_PGGVRGIQRRR_					0	0	0		ENST00000562955.2_2_1:43919018-43919642:+|nuORF	ENST00000562955.2_2_1:43919018-43919642:+|nuORF	ENST00000562955.2_2_1:43919018-43919642:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.92236328125	3	417.921683	1250.74322	-1.7716	-0.00074038	3.301	0.0013796	1.5294	0.00063919	417.92308931399344	105.49	2.9586	105.65	104.79	107.75	0.15925					261	73	4	0	0	0	0.75921	1	11287	11287		12.957	0	1	33626000			40709	13858	27142	27154	46277	46277					0.1278773486544651
PGHPPPVV	8	Unmodified	_PGHPPPVV_					0	0	0			REV__ENST00000372827.7_1_1:40224173-40224701:-|nuORF	REV__ENST00000372827.7_1_1:40224173-40224701:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.2280578613281	2	400.226688	798.438824	0.31926	0.00012778	4.1334	0.0016543	4.4527	0.0017821	400.2284187459368	54.769	2.6558	54.861	53.242	55.898	0.091167					119	74	2	0	0	0	0.80127	1	4544	4544		16.705	0	1	1143300	+		40710	25733	27143	27155	46278	46278					0.0315416538842328
PGHPPPVV	8	Unmodified	_PGHPPPVV_					0	0	0			REV__ENST00000372827.7_1_1:40224173-40224701:-|nuORF	REV__ENST00000372827.7_1_1:40224173-40224701:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2241516113281	2	400.226688	798.438824	1.6042	0.00064204	1.2189	0.00048786	2.8231	0.0011299	400.22746352224425	50.179	1.111	50.626	50.02	51.131	0.44761					49	26	3	0	0	0	0.84567	1	4964	4964		24.504	0	1	615680	+		40711	25733	27143	27155	46279	46279					0.0315416538842328
PGHPPPVV	8	Unmodified	_PGHPPPVV_					0	0	0			REV__ENST00000372827.7_1_1:40224173-40224701:-|nuORF	REV__ENST00000372827.7_1_1:40224173-40224701:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.22772216796875	2	400.226688	798.438824	1.1221	0.00044908	1.5017	0.000601	2.6237	0.0010501	400.22744040827075	52.487	1.5647	52.911	52.149	53.713	0.42348					74	37	3	0	0	0	0.80127	2	5290	5278;5290		24.504	7.799	1	9430900	+		40712	25733	27143	27155	46280;46281	46281					0.0315416538842328
PGHPPPVV	8	Unmodified	_PGHPPPVV_					0	0	0			REV__ENST00000372827.7_1_1:40224173-40224701:-|nuORF	REV__ENST00000372827.7_1_1:40224173-40224701:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	400.226688	798.438824	1.6042	0.00064204	1.2189	0.00048786	2.8231	0.0011299	400.22746352224425	50.179	1.111	50.626	50.02	51.131	0.44761	0	0	NaN	24.504	49	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	615680	+		40713	25733	27143	27155							0.0315416538842328
PGHPVLPPAS	10	Unmodified	_PGHPVLPPAS_					0	0	0		ENST00000463515.1_1_10:103339125-103339206:-|nuORF	ENST00000463515.1_1_10:103339125-103339206:-|nuORF	ENST00000463515.1_1_10:103339125-103339206:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.26715087890625	2	486.269084	970.523616	-1.0289	-0.00050034	-2.8077	-0.0013653	-3.8366	-0.0018656	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.86305	1	8151	8151		31.955	2.8053	1	1182200			40714	12068	27144	27156	46282	46282					0.037174911343640815
PGHRDPPH	8	Unmodified	_PGHRDPPH_					0	0	0			REV__ENST00000435607.3_2_17:62038580-62038748:-|nuORF	REV__ENST00000435607.3_2_17:62038580-62038748:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7271728515625	2	456.725375	911.436198	-0.16136	-7.3697E-05	4.2106	0.0019231	4.0492	0.0018494	456.72713160093247	76.69	0.8143	77.259	76.89	77.704	0.56835					40	25	2	0	0	0	0.90465	1	8754	8754		40.573	0	1	345330	+		40715	26678	27145	27157	46283	46283					-0.023062900165314204
PGHRVVRAAL	10	Unmodified	_PGHRVVRAAL_					0	0	0		ENST00000479282.5_1_1:16272460-16274990:-|nuORF	ENST00000479282.5_1_1:16272460-16274990:-|nuORF	ENST00000479282.5_1_1:16272460-16274990:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3247680664062	2	538.327799	1074.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.25	1	113.28	112.78	113.78	0.027321								0	0	0	0.45132	1	12372	12372		27.882	3.6795	1				40716	12405	27146	27158	46284	46284					0.10671068793840277
PGHSLLRCEGR	11	Unmodified	_PGHSLLRCEGR_					0	0	0			REV__ENST00000330817.10_1_22:50297886-50298133:-|nuORF	REV__ENST00000330817.10_1_22:50297886-50298133:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.8792724609375	3	408.880384	1223.61932	-2.1156	-0.00086504	0.12889	5.2699E-05	-1.9867	-0.00081234	408.8803002562497	23.885	1.1542	23.885	23.413	24.568	0					112	51	3	0	0	0	0.70584	1	781	781		30.569	3.5215	1	176940	+		40717	25119	27147	27159	46285	46285					0.016458959829378728
PGHSSKRLLR	10	Unmodified	_PGHSSKRLLR_					0	0	0			REV__ENST00000577066.2_1_17:79006875-79007058:-|nuORF	REV__ENST00000577066.2_1_17:79006875-79007058:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8436279296875	2	575.843813	1149.67307	0.91801	0.00052863	-1.6012	-0.00092203	-0.68318	-0.00039341	575.8426932888133	103.68	0.90424	103.72	103.4	104.3	0.041481					53	21	4	0	0	0	0.85251	1	11260	11260		19.997	0.89325	1	514340	+		40718	29000	27148	27160	46286	46286					0.10422436476983421
PGIAACRPL	9	Unmodified	_PGIAACRPL_					0	0	0			REV__ENST00000496978.5_1_4:154143465-154143747:+|nuORF	REV__ENST00000496978.5_1_4:154143465-154143747:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.7373046875	2	449.25238	896.490207	-0.289	-0.00012983	-3.8492	-0.0017293	-4.1382	-0.0018591	449.25040663716464	54.736	0.54617	55.142	54.864	55.411	0.40663					17	12	2	0	0	0	0.20322	1	5569	5569		55.504	19.886	1	124280	+		40719	27760	27149	27161	46287	46287					0.037821660907980004
PGIAEVTIRP	10	Unmodified	_PGIAEVTIRP_					0	0	0		ENST00000460402.5_1_22:19776234-19842274:-|nuORF;ENSG00000185838|ENST00000329517|GNB1L	ENST00000460402.5_1_22:19776234-19842274:-|nuORF	ENST00000460402.5_1_22:19776234-19842274:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	527.3073120117188	2	526.808574	1051.60259	-0.10054	-5.2966E-05	-0.84901	-0.00044727	-0.94955	-0.00050023	526.80805153199	100.65	1.7806	100.86	100.42	102.2	0.21511					97	42	4	0	0	0	0.80179	1	10613	10613		39.253	3.6345	1	2744500			40720	7746	27150	27162	46288	46288					0.07885718368675043
PGIAEVTIRP	10	Unmodified	_PGIAEVTIRP_					0	0	0		ENST00000460402.5_1_22:19776234-19842274:-|nuORF;ENSG00000185838|ENST00000329517|GNB1L	ENST00000460402.5_1_22:19776234-19842274:-|nuORF	ENST00000460402.5_1_22:19776234-19842274:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8080444335938	2	526.808574	1051.60259	2.0771	0.0010942	-3.8443	-0.0020252	-1.7672	-0.00093099	526.8065947880607	99.033	1.2732	99.395	98.525	99.798	0.36137					108	31	5	0	0	0	0.3985	1	11860	11860		64.207	2.0999	1	32054000			40721	7746	27150	27162	46289	46289					0.07885718368675043
PGIAGLMKI	9	Unmodified	_PGIAGLMKI_					0	0	0		nc|ENSG00000151500|Q9P016-2|THYN1;ENST00000533975.1_1_11:134119036-134122923:-|nuORF;ENSG00000151500|ENST00000341541|THYN1	nc|ENSG00000151500|Q9P016-2|THYN1	nc|ENSG00000151500|Q9P016-2|THYN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2746276855469	2	450.272781	898.531009	5.7611	0.0025941	-1.4274	-0.00064274	4.3336	0.0019513	450.27205859579124	111.48	0.32362	111.53	111.33	111.66	0.049095					16	11	2	0	0	0	0.7932	1	13529	13529		26.796	0	1	502250			40722	5122	27151	27163	46290	46290					0.07768507410446546
PGIEAHPVLK	10	Unmodified	_PGIEAHPVLK_					0	0	0		ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000130827|ENST00000369682|PLXNA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8101196289062	2	530.811116	1059.60768	1.9903	0.0010565	-3.4824	-0.0018485	-1.4921	-0.00079202	530.8091393249302	98.15	1.1454	98.536	98.015	99.161	0.38548					61	23	4	0	0	0	0.51302	1	11827	11827		54.776	1.8396	1	1598900			40723	3691	27152	27164	46291	46291					0.0802602223127451
PGIEAHPVLK	10	Unmodified	_PGIEAHPVLK_					0	0	0		ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000130827|ENST00000369682|PLXNA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8101806640625	2	530.811116	1059.60768	1.4098	0.00074832	-2.9191	-0.0015495	-1.5094	-0.00080119	530.8094640978223	98.257	0.82304	98.634	98.205	99.028	0.37679					58	19	4	0	0	0	0.42393	1	11853	11853		62.107	5.3864	1	1548000			40724	3691	27152	27164	46292	46292					0.0802602223127451
PGIECCSD	8	Unmodified	_PGIECCSD_					0	0	0			REV__ENSG00000171988|ENST00000399262|JMJD1C	REV__ENSG00000171988|ENST00000399262|JMJD1C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.17572021484375	2	412.151671	822.28879	-1.802	-0.0007427	-0.019239	-7.9295E-06	-1.8213	-0.00075063	412.1517939401381	94.609	0.37257	94.84	94.694	95.067	0.23103					13	8	2	0	0	0	0.4196	1	9659	9659		19.36	11.129	1	77359	+		40725	21793	27153	27165	46293	46293					-0.12946310727863874
PGIEMRST	8	Unmodified	_PGIEMRST_					0	0	0		ENST00000292566.3_1_7:102097735-102097831:-|nuORF	ENST00000292566.3_1_7:102097735-102097831:-|nuORF	ENST00000292566.3_1_7:102097735-102097831:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.7253723144531	2	445.723652	889.432752	1.0481	0.00046718	1.2735	0.00056761	2.3216	0.0010348	445.7244055808773	100.53	0.92635	100.83	100.45	101.37	0.2999					53	22	4	0	0	0	0.89962	1	12212	12212		38.806	1.7777	1	1243200			40726	9691	27154	27166	46294	46294					-0.016387209054073537
PGIFPRSQ	8	Unmodified	_PGIFPRSQ_					0	0	0		ENST00000563365.1_2_2:55509501-55509765:+|nuORF	ENST00000563365.1_2_2:55509501-55509765:+|nuORF	ENST00000563365.1_2_2:55509501-55509765:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2485046386719	2	451.248152	900.481751	-0.3832	-0.00017292	2.0006	0.00090277	1.6174	0.00072985	451.2489352445761	65.642	1.3866	65.607	65.049	66.435	-0.034798					101	71	2	0	0	0	0.89962	1	6304	6304		38.806	3.1879	1	1243000			40727	13868	27155	27167	46295	46295					0.02752935445857929
PGIKKKFFFV	10	Unmodified	_PGIKKKFFFV_					0	0	0			REV__ENST00000560723.5_1_15:81616080-81616440:-|nuORF	REV__ENST00000560723.5_1_15:81616080-81616440:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.8720703125	2	605.870977	1209.7274	-0.046166	-2.7971E-05	1.7887	0.0010837	1.7425	0.0010557	605.8718844200029	100.18	2.006	100.22	99.762	101.77	0.046349					129	46	5	0	0	0	0.86201	1	10770	10770		24.203	0.68005	1	1666000	+		40728	28767	27156	27168	46296	46296					0.13092635575821987
PGITLTLP	8	Unmodified	_PGITLTLP_					0	0	0		ENSG00000181378|ENST00000341552|CFAP65;nc|ENSG00000181378|Q6ZU64-4|CFAP65;nc|ENSG00000181378|Q6ZU64-5|CFAP65;ENST00000462848.5_1_2:219894910-219906234:-|nuORF	ENSG00000181378|ENST00000341552|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2489318847656	2	406.249829	810.485105	-0.18598	-7.5555E-05	-2.5531	-0.0010372	-2.7391	-0.0011128	406.2487203598378	111.64	0.79961	111.58	111.26	112.06	-0.059937					46	25	2	0	0	0	0.87276	1	12175	12175		29.842	6.8048	1	69533			40729	7383	27157	27169	46297	46297					0.07228185499855044
PGIWHLKKP	9	Unmodified	_PGIWHLKKP_					0	0	0			REV__ENST00000312413.10_1_1:11893988-11894412:+|nuORF	REV__ENST00000312413.10_1_1:11893988-11894412:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.32666015625	2	538.324194	1074.63383	1.8602	0.0010014	3.2273	0.0017374	5.0875	0.0027387	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.72402	1	12367	12367		38.806	9.6566	1	19391000	+		40730	24914	27158	27170	46298	46298					0.09950336193401199
PGKANVSLFL	10	Unmodified	_PGKANVSLFL_					0	0	0		ENST00000475582.5_1_2:27590224-27590551:-|nuORF	ENST00000475582.5_1_2:27590224-27590551:-|nuORF	ENST00000475582.5_1_2:27590224-27590551:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.305667	1044.59678	-0.83281	-0.00043582	-3.2133	-0.0016815	-4.0461	-0.0021173	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.64457	1	8181	8181		47.657	13.485	1	2778600			40731	12325	27159	27171	46299	46299					0.0762661985700106
PGKDGASGH	9	Unmodified	_PGKDGASGH_					0	0	0		CON__P04258	CON__P04258	CON__P04258	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1943054199219	2	413.196116	824.37768	-1.8302	-0.00075625	-4.0037	-0.0016543	-5.834	-0.0024106	413.19437338858427	78.719	2.8895	78.846	78.411	81.3	0.12695					158	87	2	0	0	0	0.76255	1	7430	7430		35.618	1.4457	1	956620		+	40732	586	27160	27172	46300	46300					-0.041533913816579116
PGKGALIHS	9	Unmodified	_PGKGALIHS_					0	0	0			REV__ENST00000372080.6_1_9:135937408-135940032:+|nuORF	REV__ENST00000372080.6_1_9:135937408-135940032:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.255126953125	2	440.255977	878.497401	-0.8618	-0.00037941	-0.60853	-0.00026791	-1.4703	-0.00064732	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.78058	1	6822	6822		30.504	8.5438	1	1365500	+		40733	25706	27161	27173	46301	46301					0.05329221962904285
PGKGARTASL	10	Unmodified	_PGKGARTASL_					0	0	0		ENSG00000168676|ENST00000304372|KCTD19	ENSG00000168676|ENST00000304372|KCTD19	ENSG00000168676|ENST00000304372|KCTD19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27740478515625	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.86587	1	8507	8507		29.17	1.0886	1	7040000			40734	6424	27162	27174	46302	46302					0.06031992020314192
PGKGRAPWLRK	11	Unmodified	_PGKGRAPWLRK_					0	0	0			REV__nc|ENSG00000161905|P16050-2|ALOX15	REV__nc|ENSG00000161905|P16050-2|ALOX15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.592041015625	3	422.591163	1264.75166	-0.14442	-6.1032E-05	3.801	0.0016063	3.6566	0.0015452	422.5926654554972	55.449	1.1746	55.439	55.01	56.184	-0.010132					83	31	3	0	0	0	0.74771	1	4955	4955		22.562	5.0936	1	310110	+		40735	29972	27163	27175	46303	46303					0.1298728878205111
PGKGRAPWLRK	11	Unmodified	_PGKGRAPWLRK_					0	0	0			REV__nc|ENSG00000161905|P16050-2|ALOX15	REV__nc|ENSG00000161905|P16050-2|ALOX15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59295654296875	3	422.591163	1264.75166	0.3184	0.00013455	3.9643	0.0016753	4.2827	0.0018098	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.70584	1	4460	4460		30.569	1.0181	1	1249100	+		40736	29972	27163	27175	46304	46304					0.1298728878205111
PGKGRAPWLRK	11	Unmodified	_PGKGRAPWLRK_					0	0	0			REV__nc|ENSG00000161905|P16050-2|ALOX15	REV__nc|ENSG00000161905|P16050-2|ALOX15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.3834838867188	2	633.383106	1264.75166	0.12605	7.984E-05	3.5406	0.0022425	3.6666	0.0023224	633.3850253113031	51.101	1.496	51.017	50.491	51.987	-0.084538					79	43	3	0	0	0	0.72374	1	4022	4022		24.519	10.382	1	224090	+		40737	29972	27163	27175	46305	46305					0.1298728878205111
PGKHRTVG	8	Unmodified	_PGKHRTVG_					0	0	0		ENST00000486327.6_1_19:47884337-47884637:+|nuORF	ENST00000486327.6_1_19:47884337-47884637:+|nuORF	ENST00000486327.6_1_19:47884337-47884637:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2458801269531	2	426.245944	850.477334	-0.1821	-7.7619E-05	0.52401	0.00022336	0.34191	0.00014574	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.81548	1	8896	8896		20.482	0	1	3805200			40738	12579	27164	27176	46306	46306					0.046114710229517186
PGKHRTVG	8	Unmodified	_PGKHRTVG_					0	0	0		ENST00000486327.6_1_19:47884337-47884637:+|nuORF	ENST00000486327.6_1_19:47884337-47884637:+|nuORF	ENST00000486327.6_1_19:47884337-47884637:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.24591064453125	2	426.245944	850.477334	0.61593	0.00026254	-0.31325	-0.00013352	0.30267	0.00012901	426.24572360202285	87.518	4.0945	87.668	85.602	89.696	0.14956					180	96	4	0	0	0	0.87479	1	8654	8654		30.504	0	1	3688500			40739	12579	27164	27176	46307	46307					0.046114710229517186
PGKILFRRSHI	11	Unmodified	_PGKILFRRSHI_					0	0	0		ENSG00000107957|ENST00000369774|SH3PXD2A;nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A;ENSG00000174705|ENST00000311601|SH3PXD2B	ENSG00000107957|ENST00000369774|SH3PXD2A;ENSG00000174705|ENST00000311601|SH3PXD2B	ENSG00000174705|ENST00000311601|SH3PXD2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9390869140625	3	441.938451	1322.79352	0.33265	0.00014701	2.713	0.001199	3.0457	0.001346	441.9395069624772	55.282	1.2267	55.373	54.736	55.962	0.091167					101	37	4	0	0	0	0.75906	1	4585	4585		20.03	4.6974	1	451030			40740	6955;2383	27165	27177	46308	46308					0.1450384447059605
PGKKDLQLF	9	Unmodified	_PGKKDLQLF_					0	0	0			REV__nc|ENSG00000164323|Q9P2B7-2|CFAP97	REV__nc|ENSG00000164323|Q9P2B7-2|CFAP97	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303955078125	2	523.305667	1044.59678	-0.040374	-2.1128E-05	-3.6389	-0.0019042	-3.6792	-0.0019254	523.3035989730673	101.38	1.8608	101.41	100.39	102.25	0.031036					84	43	4	0	0	0	0.7932	1	10822	10822		23.042	0	1	1068900	+		40741	21068	27166	27178	46309	46309					0.07626619856978323
PGKKGASRPPR	11	Unmodified	_PGKKGASRPPR_					0	0	0		ENST00000342963.2_1_7:5459527-5460374:+|nuORF	ENST00000342963.2_1_7:5459527-5460374:+|nuORF	ENST00000342963.2_1_7:5459527-5460374:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.843505859375	2	575.843813	1149.67307	-0.46596	-0.00026832	-0.81024	-0.00046657	-1.2762	-0.00073489	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.70737	1	9278	9278		30.318	0	1	3411000			40742	10270	27167	27179	46310	46310					0.10422436476960684
PGKKHGPL	8	Unmodified	_PGKKHGPL_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25262451171875	2	417.253237	832.491922	-1.8958	-0.00079101	1.4773	0.0006164	-0.41848	-0.00017461	417.2537348130364	35.472	1.6692	35.503	35.168	36.838	0.031132					80	49	2	0	0	0	0.82419	1	1889	1889		13.775	0.81615	1	197380	+		40743	18360	27168	27180	46311	46311					0.06897543171089637
PGKKHGPL	8	Unmodified	_PGKKHGPL_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2511901855469	2	417.253237	832.491922	0.19004	7.9296E-05	-1.3103	-0.00054671	-1.1202	-0.00046741	417.25266154969415	40.16	1.5962	40.242	39.962	41.558	0.081345					103	51	3	0	0	0	0.86791	1	2582	2582		28.254	6.5519	1	586280	+		40744	18360	27168	27180	46312	46312					0.06897543171089637
PGKLRLLA	8	Unmodified	_PGKLRLLA_					0	0	0		ENST00000493944.5_1_7:6618325-6621932:+|nuORF	ENST00000493944.5_1_7:6618325-6621932:+|nuORF	ENST00000493944.5_1_7:6618325-6621932:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2515869140625	2	434.292362	866.570172	0.033268	1.4448E-05	1.9638	0.00085286	1.9971	0.00086731	434.2928747730098	78.808	0.15974	78.755	78.678	78.838	-0.053558					5	3	2	0	0	0	0.4196	1	7869	7869		13.775	9.0936	1	14115			40745	12742	27169	27181	46313	46313					0.13154975756310705
PGKNKTVR	8	Unmodified	_PGKNKTVR_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2741394042969	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.84341	7	9152	9152;9198;9210;9234;9246;9258;9317		35.618	10.168	1	26247000	+		40746	26788	27170	27182	46314;46315;46316;46317;46318;46319;46320	46314					0.08152313228504227
PGKNKTVR	8	Unmodified	_PGKNKTVR_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2742614746094	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.87479	4	9651	9639;9651;9663;9711		38.806	10.552	1	47650000	+		40747	26788	27170	27182	46321;46322;46323;46324	46322					0.08152313228504227
PGKNKTVR	8	Unmodified	_PGKNKTVR_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2742004394531	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.86677	5	9904	9844;9880;9904;9965;9977		35.618	6.4687	1	51820000	+		40748	26788	27170	27182	46325;46326;46327;46328;46329	46327					0.08152313228504227
PGKNKTVR	8	Unmodified	_PGKNKTVR_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2742919921875	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.86677	12	9701	9690;9701;9737;9749;9773;9785;9797;9821;9871;9883;9895;9906		38.806	10.168	1	51698000	+		40749	26788	27170	27182	46330;46331;46332;46333;46334;46335;46336;46337;46338;46339;46340;46341	46331					0.08152313228504227
PGKNKTVR	8	Unmodified	_PGKNKTVR_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.27435302734375	2	450.274701	898.534849	-1.2506	-0.00056311	0.52833	0.00023789	-0.72226	-0.00032522	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.86677	7	9533	9377;9400;9424;9460;9484;9533;9546		40.778	14.085	1	44812000	+		40750	26788	27170	27182	46342;46343;46344;46345;46346;46347;46348	46347					0.08152313228504227
PGKNKTVR	8	Unmodified	_PGKNKTVR_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2743835449219	2	450.274701	898.534849	-1.247	-0.00056151	1.4065	0.00063329	0.15942	7.1784E-05	450.2752637415859	95.005	1.8382	95.236	94.9	96.739	0.23103					104	43	3	0	0	0	0.8347	1	9738	9738		23.042	2.5607	1	829000	+		40751	26788	27170	27182	46349	46349					0.08152313228504227
PGKNKTVR	8	Unmodified	_PGKNKTVR_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.27423095703125	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.86677	9	9409	9397;9409;9433;9445;9457;9481;9493;9505;9554		38.806	5.0535	1	41438000	+		40752	26788	27170	27182	46350;46351;46352;46353;46354;46355;46356;46357;46358	46351					0.08152313228504227
PGKNKTVR	8	Unmodified	_PGKNKTVR_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2744140625	2	450.274701	898.534849	0.70497	0.00031743	-0.5445	-0.00024518	0.16047	7.2255E-05	450.274392035395	95.119	1.9705	95.282	94.908	96.878	0.16307					118	46	3	0	0	0	0.79929	1	9743	9743		18.324	1.8513	1	967700	+		40753	26788	27170	27182	46359	46359					0.08152313228504227
PGKNKTVR	8	Unmodified	_PGKNKTVR_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2744140625	2	450.274701	898.534849	-1.7763	-0.00079984	1.0964	0.00049366	-0.67999	-0.00030618	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.87479	3	9334	9334;9393;9478		38.806	13.356	1	35178000	+		40754	26788	27170	27182	46360;46361;46362	46360					0.08152313228504227
PGKNKTVR	8	Unmodified	_PGKNKTVR_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.27447509765625	2	450.274701	898.534849	0.49619	0.00022342	-0.76811	-0.00034586	-0.27192	-0.00012244	450.2742908789494	92.742	1.9986	93.189	92.476	94.475	0.44661					184	49	6	0	0	0	0.87479	6	11052	11016;11028;11040;11052;11063;11076		35.618	5.0535	1	16577000	+		40755	26788	27170	27182	46363;46364;46365;46366;46367;46368	46366					0.08152313228504227
PGKNKTVR	8	Unmodified	_PGKNKTVR_					0	0	0			REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	REV__ENST00000444527.2_1_8:56364433-56364982:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.27435302734375	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.87479	3	11097	11097;11109;11121		38.806	5.0535	1	19085000	+		40756	26788	27170	27182	46369;46370;46371	46369					0.08152313228504227
PGKNSRALA	9	Unmodified	_PGKNSRALA_					0	0	0		nc|ENSG00000231852|P08686-2|CYP21A2;ENSG00000231852|ENST00000644719|CYP21A2	nc|ENSG00000231852|P08686-2|CYP21A2	nc|ENSG00000231852|P08686-2|CYP21A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2626953125	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.74721	1	8720	8720		37.159	5.2042	1	4885100			40757	8736	27171	27183	46372	46372					0.05435722848835667
PGKNSSIQL	9	Unmodified	_PGKNSSIQL_					0	0	0		nc|ENSG00000129493|Q86XA9-2|HEATR5A;nc|ENSG00000129493|Q86XA9|HEATR5A;ENSG00000129493|ENST00000543095|HEATR5A;ENST00000551414.1_1_14:31762513-31765297:-|nuORF	nc|ENSG00000129493|Q86XA9-2|HEATR5A	nc|ENSG00000129493|Q86XA9-2|HEATR5A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2877197265625	2	472.263999	942.513445	1.9791	0.00093468	0.72439	0.0003421	2.7035	0.0012768	472.2641043173513	95.141	0.29491	95.084	94.85	95.145	-0.057526					10	6	2	0	0	0	0.20789	1	10133	10133		58.782	33.332	1	91512			40758	3591	27172	27184	46373	46373					0.03988883409135724
PGKNVKVTTQ	10	Unmodified	_PGKNVKVTTQ_					0	0	0		nc|ENSG00000121807|P41597|CCR2	nc|ENSG00000121807|P41597|CCR2	nc|ENSG00000121807|P41597|CCR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.3115844726562	2	536.31148	1070.60841	0.81552	0.00043737	-0.91371	-0.00049003	-0.098186	-5.2658E-05	536.3111151208288	98.264	1.5767	98.425	97.46	99.037	0.16073					71	35	3	0	0	0	0.86471	1	10186	10186		30.318	5.7985	1	298380			40759	14879	27173	27185	46374	46374					0.07592816880310238
PGKPILPVQTG	11	Unmodified	_PGKPILPVQTG_					0	0	0		nc|ENSG00000197818|Q9Y2E8-2|SLC9A8;ENSG00000197818|ENST00000361573|SLC9A8;ENST00000489787.1_1_20:48429459-48431791:+|nuORF	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8302612304688	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.68532	3	8790	8790;8826;8838		33.922	4.7721	1	3935500			40760	8202	27174	27186	46375;46376;46377	46375					0.10094577919812764
PGKPILPVQTG	11	Unmodified	_PGKPILPVQTG_					0	0	0		nc|ENSG00000197818|Q9Y2E8-2|SLC9A8;ENSG00000197818|ENST00000361573|SLC9A8;ENST00000489787.1_1_20:48429459-48431791:+|nuORF	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8301391601562	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.67778	1	9192	9192		35.152	4.6484	1	5219600			40761	8202	27174	27186	46378	46378					0.10094577919812764
PGKPILPVQTG	11	Unmodified	_PGKPILPVQTG_					0	0	0		nc|ENSG00000197818|Q9Y2E8-2|SLC9A8;ENSG00000197818|ENST00000361573|SLC9A8;ENST00000489787.1_1_20:48429459-48431791:+|nuORF	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8300170898438	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.67778	1	8881	8881		35.152	3.6222	1	1844500			40762	8202	27174	27186	46379	46379					0.10094577919812764
PGKPILPVQTG	11	Unmodified	_PGKPILPVQTG_					0	0	0		nc|ENSG00000197818|Q9Y2E8-2|SLC9A8;ENSG00000197818|ENST00000361573|SLC9A8;ENST00000489787.1_1_20:48429459-48431791:+|nuORF	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8298950195312	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.67778	1	8940	8940		35.152	3.6222	1	6402500			40763	8202	27174	27186	46380	46380					0.10094577919812764
PGKPILPVQTG	11	Unmodified	_PGKPILPVQTG_					0	0	0		nc|ENSG00000197818|Q9Y2E8-2|SLC9A8;ENSG00000197818|ENST00000361573|SLC9A8;ENST00000489787.1_1_20:48429459-48431791:+|nuORF	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8300170898438	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.72106	1	8863	8863		28.081	1.3886	1	1728300			40764	8202	27174	27186	46381	46381					0.10094577919812764
PGKPILPVQTG	11	Unmodified	_PGKPILPVQTG_					0	0	0		nc|ENSG00000197818|Q9Y2E8-2|SLC9A8;ENSG00000197818|ENST00000361573|SLC9A8;ENST00000489787.1_1_20:48429459-48431791:+|nuORF	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8297729492188	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.69248	3	8955	8955;8967;9028		32.751	1.2207	1	5453100			40765	8202	27174	27186	46382;46383;46384	46382					0.10094577919812764
PGKPILPVQTG	11	Unmodified	_PGKPILPVQTG_					0	0	0		nc|ENSG00000197818|Q9Y2E8-2|SLC9A8;ENSG00000197818|ENST00000361573|SLC9A8;ENST00000489787.1_1_20:48429459-48431791:+|nuORF	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8303833007812	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.68532	2	10745	10745;10877		33.922	7.2287	1	5911200			40766	8202	27174	27186	46385;46386	46385					0.10094577919812764
PGKPLKCI	8	Unmodified	_PGKPLKCI_					0	0	0		ENSG00000100412|ENST00000216254|ACO2	ENSG00000100412|ENST00000216254|ACO2	ENSG00000100412|ENST00000216254|ACO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2615051269531	2	428.259674	854.504795	1.4286	0.0006118	3.216	0.0013773	4.6446	0.0019891	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.86288	1	9714	9714		26.796	3.7536	1	57042000			40767	1838	27175	27187	46387	46387					0.0717223823896802
PGKPLKCI	8	Unmodified	_PGKPLKCI_					0	0	0		ENSG00000100412|ENST00000216254|ACO2	ENSG00000100412|ENST00000216254|ACO2	ENSG00000100412|ENST00000216254|ACO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2614440917969	2	428.259674	854.504795	2.6337	0.0011279	1.993	0.00085353	4.6268	0.0019815	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.86288	1	9473	9473		26.796	1.3459	1	55300000			40768	1838	27175	27187	46388	46388					0.0717223823896802
PGKPYRLI	8	Unmodified	_PGKPYRLI_					0	0	0		ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2877197265625	2	472.28982	942.565087	-1.7052	-0.00080536	-2.8033	-0.001324	-4.5086	-0.0021293	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.86288	1	9752	9752		26.796	0.10319	1	40161000			40769	6271	27176	27188	46389	46389					0.09150671893701201
PGKRTRGGRKR	11	Unmodified	_PGKRTRGGRKR_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.59765625	3	423.597199	1267.76977	2.8995	0.0012282	-1.8477	-0.00078269	1.0517	0.00044551	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.7434	1	11636	11636		21.032	5.6948	1	6928400	+		40770	18092	27177	27189	46390	46390					0.14659423756779688
PGKVKLNKE	9	Unmodified	_PGKVKLNKE_					0	0	0			REV__chr8:56073272-56073713|18|18.61|0.21|6.47|-|0|RPS20,None|1	REV__chr8:56073272-56073713|18|18.61|0.21|6.47|-|0|RPS20,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8118896484375	2	506.811116	1011.60768	0.38226	0.00019373	1.5071	0.00076382	1.8894	0.00095755	506.8119861314072	15.853	0.22678	15.363	15.255	15.482	-0.48917					6	4	2	0	0	0	0.7932	1	60	60		26.693	3.6504	1	42043	+		40771	15923	27178	27190	46391	46391					0.1023402223128187
PGKVKLNKE	9	Unmodified	_PGKVKLNKE_					0	0	0			REV__chr8:56073272-56073713|18|18.61|0.21|6.47|-|0|RPS20,None|1	REV__chr8:56073272-56073713|18|18.61|0.21|6.47|-|0|RPS20,None|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	506.811116	1011.60768	-0.01032	-5.2305E-06	0.87327	0.00044258	0.86295	0.00043735	506.8113515700473	15.703	0.11053	15.619	15.558	15.669	-0.083363	0.14484	-0.00013693	NaN	26.693	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37206	+		40772	15923	27178	27190							0.1023402223128187
PGKVKLNKE	9	Unmodified	_PGKVKLNKE_					0	0	0			REV__chr8:56073272-56073713|18|18.61|0.21|6.47|-|0|RPS20,None|1	REV__chr8:56073272-56073713|18|18.61|0.21|6.47|-|0|RPS20,None|1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	506.811116	1011.60768	0.38226	0.00019373	1.5071	0.00076382	1.8894	0.00095755	506.8119861314072	15.853	0.22678	15.363	15.255	15.482	-0.48917	-0.11106	0.00050554	NaN	26.693	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42043	+		40773	15923	27178	27190							0.1023402223128187
PGKVKLNKE	9	Unmodified	_PGKVKLNKE_					0	0	0			REV__chr8:56073272-56073713|18|18.61|0.21|6.47|-|0|RPS20,None|1	REV__chr8:56073272-56073713|18|18.61|0.21|6.47|-|0|RPS20,None|1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	506.811116	1011.60768	1.2132	0.00061485	0.3609	0.00018291	1.5741	0.00079776	506.8112369619667	15.858	0.27449	15.259	15.148	15.422	-0.59873	-0.21514	-0.00065628	NaN	26.693	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37404	+		40774	15923	27178	27190							0.1023402223128187
PGKVPLVD	8	Unmodified	_PGKVPLVD_					0	0	0			REV__nc|ENSG00000101639|Q8TEP8-1|CEP192	REV__nc|ENSG00000101639|Q8TEP8-1|CEP192	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7461853027344	2	412.747453	823.480354	0.7641	0.00031538	-3.3391	-0.0013782	-2.575	-0.0010628	412.7458735732829	85.139	3.1869	85.067	83.891	87.078	-0.07196					136	73	4	0	0	0	0.82658	1	8747	8747		21.96	0	1	1556000	+		40775	17293	27179	27191	46392	46392					0.06155301357080134
PGKVRKYI	8	Unmodified	_PGKVRKYI_					0	0	0		ENST00000474564.1_1_6:75852961-75855988:-|nuORF;nc|ENSG00000111799|Q99715-2|COL12A1;nc|ENSG00000111799|Q99715-4|COL12A1;ENSG00000111799|ENST00000322507|COL12A1	ENST00000474564.1_1_6:75852961-75855988:-|nuORF;nc|ENSG00000111799|Q99715-2|COL12A1	nc|ENSG00000111799|Q99715-2|COL12A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.80133056640625	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.81548	1	9978	9978		20.482	1.1219	1	17379000			40776	2613;12306	27180	27192	46393	46393					0.1102236078503438
PGKVVITLFS	10	Unmodified	_PGKVVITLFS_					0	0	0		nc|ENSG00000188672|P18577-11|RHCE;ENSG00000188672|ENST00000294413|RHCE;nc|ENSG00000188672|P18577-4|RHCE;nc|ENSG00000188672|P18577-10|RHCE;nc|ENSG00000188672|P18577-3|RHCE;ENST00000527187.5_1_1:25712128-25747316:-|nuORF;nc|ENSG00000188672|P18577-6|RHCE;nc|ENSG00000188672|P18577-5|RHCE;nc|ENSG00000188672|P18577-12|RHCE;nc|ENSG00000188672|P18577-2|RHCE;nc|ENSG00000188672|P18577-13|RHCE;nc|ENSG00000188672|P18577-7|RHCE;nc|ENSG00000188672|P18577-8|RHCE;nc|ENSG00000188672|P18577-9|RHCE;nc|ENSG00000188672|P18577-14|RHCE	nc|ENSG00000188672|P18577-11|RHCE	nc|ENSG00000188672|P18577-11|RHCE	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8207397460938	2	530.823692	1059.63283	-0.88248	-0.00046844	-3.9714	-0.0021081	-4.8539	-0.0025765	530.821384723199	80.761	1.5978	80.761	80.141	81.738	0					159	57	4	0	0	0	0.86763	1	7477	7477		26.693	3.6504	1	2196600			40777	7947	27181	27193	46394	46394					0.10540077033851958
PGKVVITLFS	10	Unmodified	_PGKVVITLFS_					0	0	0		nc|ENSG00000188672|P18577-11|RHCE;ENSG00000188672|ENST00000294413|RHCE;nc|ENSG00000188672|P18577-4|RHCE;nc|ENSG00000188672|P18577-10|RHCE;nc|ENSG00000188672|P18577-3|RHCE;ENST00000527187.5_1_1:25712128-25747316:-|nuORF;nc|ENSG00000188672|P18577-6|RHCE;nc|ENSG00000188672|P18577-5|RHCE;nc|ENSG00000188672|P18577-12|RHCE;nc|ENSG00000188672|P18577-2|RHCE;nc|ENSG00000188672|P18577-13|RHCE;nc|ENSG00000188672|P18577-7|RHCE;nc|ENSG00000188672|P18577-8|RHCE;nc|ENSG00000188672|P18577-9|RHCE;nc|ENSG00000188672|P18577-14|RHCE	nc|ENSG00000188672|P18577-11|RHCE	nc|ENSG00000188672|P18577-11|RHCE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.82080078125	2	530.823692	1059.63283	-1.2397	-0.00065807	-4.086	-0.002169	-5.3257	-0.002827	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.86348	1	7576	7576		31.53	2.3803	1	869100			40778	7947	27181	27193	46395	46395					0.10540077033851958
PGLAQSPELF	10	Unmodified	_PGLAQSPELF_					0	0	0			REV__ENSG00000106246|ENST00000292478|PTCD1	REV__ENSG00000106246|ENST00000292478|PTCD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.782470703125	2	529.779482	1057.54441	0.065511	3.4706E-05	2.8466	0.0015081	2.9121	0.0015428	529.7807903370734	52.522	1.485	53.136	52.584	54.069	0.61446					111	35	5	0	0	0	0.73395	1	5222	5222		42.864	2.2917	1	6729200	+		40779	17602	27182	27194	46396	46396					0.017940367233677534
PGLATFGYS	9	Unmodified	_PGLATFGYS_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;ENST00000505306.5_1_17:48133647-48154208:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.72711181640625	2	456.726718	911.438883	-0.044258	-2.0214E-05	0.75686	0.00034568	0.7126	0.00032546	456.7270665410181	77.738	0.52579	77.687	77.375	77.901	-0.050789					41	22	2	0	0	0	0.72402	1	7723	7723		38.806	1.7777	1	67866			40780	689	27183	27195	46397	46397					-0.0203787940224629
PGLATFGYS	9	Unmodified	_PGLATFGYS_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;ENST00000505306.5_1_17:48133647-48154208:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	456.726718	911.438883	-0.13271	-6.0611E-05	0.792	0.00036173	0.6593	0.00030112	456.72710623549915	77.757	0.70704	77.809	77.402	78.109	0.052704	0.16686	-0.0003983	NaN	38.806	48	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85903			40781	689	27183	27195							-0.0203787940224629
PGLATFGYS	9	Unmodified	_PGLATFGYS_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;ENST00000505306.5_1_17:48133647-48154208:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	456.726718	911.438883	0.16797	7.6717E-05	0.5613	0.00025636	0.72927	0.00033308	456.7269928347912	77.61	0.69723	77.659	77.243	77.94	0.04969	0.016951	-0.00060904	NaN	38.806	44	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77671			40782	689	27183	27195							-0.0203787940224629
PGLATFGYS	9	Unmodified	_PGLATFGYS_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;ENST00000505306.5_1_17:48133647-48154208:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	456.726718	911.438883	-1.1811	-0.00053942	1.8612	0.00085006	0.68013	0.00031063	456.7276086171169	77.445	0.56995	77.569	77.332	77.902	0.12485	-0.073054	0.00057836	NaN	38.806	36	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72172			40783	689	27183	27195							-0.0203787940224629
PGLATFGYS	9	Unmodified	_PGLATFGYS_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;ENST00000505306.5_1_17:48133647-48154208:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	456.726718	911.438883	0.54984	0.00025113	0.23472	0.0001072	0.78457	0.00035833	456.7268924659608	77.435	0.69015	77.569	77.215	77.905	0.13478	-0.073058	-0.00090735	NaN	38.806	42	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68656			40784	689	27183	27195							-0.0203787940224629
PGLATFGYS	9	Unmodified	_PGLATFGYS_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;ENST00000505306.5_1_17:48133647-48154208:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	456.726718	911.438883	-1.3838	-0.00063201	2.3119	0.0010559	0.92816	0.00042391	456.72776860163566	77.469	0.59851	77.56	77.295	77.893	0.091438	-0.082247	0.00099008	NaN	38.806	44	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91524			40785	689	27183	27195							-0.0203787940224629
PGLCLAFI	8	Unmodified	_PGLCLAFI_					0	0	0		ENST00000482171.5_1_2:130912058-130912505:-|nuORF	ENST00000482171.5_1_2:130912058-130912505:-|nuORF	ENST00000482171.5_1_2:130912058-130912505:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2334289550781	2	417.233125	832.451696	-1.9007	-0.00079304	-0.059442	-2.4801E-05	-1.9602	-0.00081784	417.23406411050627	32.902	0.70251	32.955	32.632	33.335	0.05246					59	32	3	0	0	0	0.88393	1	1566	1566		33.493	5.6107	1	130350			40786	12480	27184	27196	46398	46398					0.0287686045630835
PGLEFSRQ	8	Unmodified	_PGLEFSRQ_					0	0	0		ENST00000359193.3_1_6:27101535-27101784:+|nuORF	ENST00000359193.3_1_6:27101535-27101784:+|nuORF	ENST00000359193.3_1_6:27101535-27101784:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.23333740234375	2	467.243067	932.47158	-0.43379	-0.00020268	4.1172	0.0019237	3.6834	0.0017211	467.24496083840995	66.708	0.3224	67.259	67.111	67.434	0.55071					18	12	2	0	0	0	0.4196	1	7309	7309		38.806	25.847	1	377560			40787	10422	27185	27197	46399	46399					0.0026432772061752985
PGLEQLLI	8	Unmodified	_PGLEQLLI_					0	0	0			REV__ENSG00000152818|ENST00000367545|UTRN	REV__ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.76763916015625	2	441.768386	881.522219	2.6046	0.0011506	-3.8646	-0.0017072	-1.26	-0.00055663	441.7665004453414	101.13	0.70285	101.46	101.12	101.82	0.32511					30	20	3	0	0	0	0.93529	1	12308	12308		52.299	3.0884	1	1154400	+		40788	20318	27186	27198	46400	46400					0.07671857045625075
PGLFRKLL	8	Unmodified	_PGLFRKLL_					0	0	0		ENSG00000105650|ENST00000262805|PDE4C	ENSG00000105650|ENST00000262805|PDE4C	ENSG00000105650|ENST00000262805|PDE4C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2876892089844	2	472.308013	942.601472	0.72463	0.00034225	4.3862	0.0020716	5.1108	0.0024139	472.3105066753443	95.169	0.56561	95.332	94.908	95.473	0.16307					18	13	2	0	0	0	0.4196	1	9769	9769		28.254	14.479	1	204380			40789	2233	27187	27199	46401	46401					0.12787548790424808
PGLFRKLL	8	Unmodified	_PGLFRKLL_					0	0	0		ENSG00000105650|ENST00000262805|PDE4C	ENSG00000105650|ENST00000262805|PDE4C	ENSG00000105650|ENST00000262805|PDE4C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2872619628906	2	472.308013	942.601472	1.3988	0.00066065	-2.6585	-0.0012556	-1.2597	-0.00059497	472.30647530071013	94.986	0.35289	95.418	95.283	95.636	0.4324					12	8	2	0	0	0	0.4196	1	11369	11369		28.254	1.4582	1	179040			40790	2233	27187	27199	46402	46402					0.12787548790424808
PGLGGKGLPG	10	Unmodified	_PGLGGKGLPG_					0	0	0		ENSG00000092758|ENST00000649368|COL9A3	ENSG00000092758|ENST00000649368|COL9A3	ENSG00000092758|ENST00000649368|COL9A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.7501525878906	2	426.750527	851.486502	-0.018115	-7.7308E-06	-0.69834	-0.00029802	-0.71646	-0.00030575	426.7498422394427	80.054	1.9801	80.471	79.445	81.425	0.41621					119	46	4	0	0	0	0.84112	1	9198	9198		37.159	0	1	660530			40791	1702	27188	27200	46403	46403					0.05481819588624148
PGLILLFYL	9	Unmodified	_PGLILLFYL_					0	0	0		nc|ENSG00000069849|P54709-2|ATP1B3;ENST00000465172.5_1_3:141595540-141640837:+|nuORF	nc|ENSG00000069849|P54709-2|ATP1B3	nc|ENSG00000069849|P54709-2|ATP1B3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8276977539062	2	524.825704	1047.63685	-0.1321	-6.933E-05	2.2122	0.001161	2.0801	0.0010917	524.8267772586088	99.003	3.4379	99.226	98.52	101.96	0.22263					298	81	5	0	0	0	0.78292	1	10455	10455		29.842	0.69198	1	31133000			40792	12105	27189	27201	46404	46404					0.1149416652756372
PGLKEAFVV	9	Unmodified	_PGLKEAFVV_					0	0	0		ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2	ENSG00000184432|ENST00000333188|COPB2	ENSG00000184432|ENST00000333188|COPB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.28125	2	480.28166	958.548768	1.0992	0.00052791	-2.6116	-0.0012543	-1.5124	-0.00072638	480.2802815297023	99.288	1.3371	99.651	99.251	100.59	0.36292					88	33	4	0	0	0	0.39977	1	12014	12014		57.811	6.4758	1	8963900			40793	7610	27190	27202	46405	46405					0.06783545936946211
PGLKSFYKL	9	Unmodified	_PGLKSFYKL_					0	0	0			REV__ENST00000480597.5_1_9:139648952-139651016:-|nuORF	REV__ENST00000480597.5_1_9:139648952-139651016:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.80810546875	2	526.810585	1051.60662	-1.5277	-0.0008048	-3.2874	-0.0017319	-4.8151	-0.0025367	526.8087430402255	100.83	1.7886	101	100.55	102.33	0.17199					107	43	4	0	0	0	0.47272	1	10531	10531		53.351	7.3995	1	3074100	+		40794	27422	27191	27203	46406	46406					0.08287807862370755
PGLLILEK	8	Unmodified	_PGLLILEK_					0	0	0		ENST00000542481.1_1_11:72534943-72536417:+|nuORF	ENST00000542481.1_1_11:72534943-72536417:+|nuORF	ENST00000542481.1_1_11:72534943-72536417:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78863525390625	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.81724	1	2907	2907		14.664	0.88877	1	15753000			40795	13534	27192	27204	46407	46407					0.11308733942325944
PGLLSKKSFFK	11	Unmodified	_PGLLSKKSFFK_					0	0	0		ENST00000391929.7_1_1:207076441-207076570:+|nuORF	ENST00000391929.7_1_1:207076441-207076570:+|nuORF	ENST00000391929.7_1_1:207076441-207076570:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.92242431640625	3	417.920174	1250.73869	2.7179	0.0011359	2.3496	0.00098195	5.0675	0.0021178	417.9211507262476	105.91	2.7799	105.88	105.06	107.84	-0.03714					241	65	4	0	0	0	0.74763	1	11698	11698		15.337	0	1	23169000			40796	11002	27193	27205	46408	46408					0.123354128793153
PGLLVRKL	8	Unmodified	_PGLLVRKL_					0	0	0			REV__ENST00000565460.1_1_16:68289553-68293557:+|nuORF	REV__ENST00000565460.1_1_16:68289553-68293557:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.3080749511719	2	448.308013	894.601472	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.224	1	81.289	80.789	81.789	0.064384								0	0	0	0.29498	1	7986	7986		26.796	5.0938	1		+		40797	17385	27194	27206	46409	46409					0.1499554879039806
PGLPAGQGTTY	11	Unmodified	_PGLPAGQGTTY_					0	0	0		ENST00000429271.1_1_21:28515847-28516243:-|nuORF	ENST00000429271.1_1_21:28515847-28516243:-|nuORF	ENST00000429271.1_1_21:28515847-28516243:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2667846679688	2	531.266739	1060.51892	-0.19781	-0.00010509	0.24084	0.00012795	0.043023	2.2857E-05	531.2667161695381	45.104	0.77737	45.567	45.264	46.041	0.46313					40	18	3	0	0	0	0.58425	1	4167	4167		45.972	1.4412	1	1576900			40798	11606	27195	27207	46410	46410					-0.008914377990549838
PGLPAGQGTTY	11	Unmodified	_PGLPAGQGTTY_					0	0	0		ENST00000429271.1_1_21:28515847-28516243:-|nuORF	ENST00000429271.1_1_21:28515847-28516243:-|nuORF	ENST00000429271.1_1_21:28515847-28516243:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2661743164062	2	531.266739	1060.51892	-0.90022	-0.00047826	0.83453	0.00044336	-0.065694	-3.4901E-05	531.2670358188946	44.918	0.77689	45.762	45.419	46.196	0.84437					44	18	3	0	0	0	0.64498	1	4166	4166		39.253	1.4413	1	1265400			40799	11606	27195	27207	46411	46411					-0.008914377990549838
PGLPPPITLR	10	Unmodified	_PGLPPPITLR_					0	0	0			REV__nc|ENSG00000127152|Q9C0K0-2|BCL11B	REV__nc|ENSG00000127152|Q9C0K0-2|BCL11B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8292236328125	2	530.829309	1059.64407	-0.18777	-9.9676E-05	0.36027	0.00019124	0.17249	9.1564E-05	530.8293441521571	73.718	1.5584	74.106	73.797	75.355	0.38779					86	39	4	0	0	0	0.8545	1	8328	8328		36.447	5.9431	1	3955200	+		40800	18725	27196	27208	46412	46412					0.1166289912796401
PGLRGTLLEP	10	Unmodified	_PGLRGTLLEP_					0	0	0		ENST00000261918.8_1_15:74702064-74702157:-|nuORF	ENST00000261918.8_1_15:74702064-74702157:-|nuORF	ENST00000261918.8_1_15:74702064-74702157:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.8087158203125	2	526.808574	1051.60259	1.2418	0.00065418	-2.4353	-0.0012829	-1.1935	-0.00062874	526.8072201508533	100.99	2.1143	101.03	100.03	102.14	0.046349					121	49	4	0	0	0	0.8608	1	10836	10836		34.173	1.3601	1	2474600			40801	9423	27197	27209	46413	46413					0.07885718368675043
PGLRPDKP	8	Unmodified	_PGLRPDKP_					0	0	0		nc|ENSG00000136367|Q9C0A1-2|ZFHX2;ENSG00000136367|ENST00000419474|ZFHX2	nc|ENSG00000136367|Q9C0A1-2|ZFHX2	nc|ENSG00000136367|Q9C0A1-2|ZFHX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.25555419921875	2	440.255977	878.497401	0.10626	4.6782E-05	-1.6749	-0.0007374	-1.5687	-0.00069062	440.25513615369636	77.169	0.87977	77.738	77.379	78.259	0.56835					33	20	2	0	0	0	0.884	1	8802	8802		33.516	0	1	782430			40802	4106	27198	27210	46414	46414					0.05329221962892916
PGLRQHLH	8	Unmodified	_PGLRQHLH_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2743835449219	2	479.272493	956.530432	2.0858	0.00099966	-1.2282	-0.00058867	0.85754	0.000411	479.2717566012235	97.527	1.0344	97.913	97.598	98.632	0.38548					64	24	4	0	0	0	0.87276	2	11699	11699;11723		39.021	1.5873	1	1495600	+		40803	17968	27199	27211	46415;46416	46415					0.05042848805612721
PGLRQHLH	8	Unmodified	_PGLRQHLH_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27252197265625	2	479.272493	956.530432	2.2912	0.0010981	-1.8257	-0.00087499	0.46557	0.00022314	479.2714500709969	101.78	0.95604	102.04	101.69	102.65	0.26322					54	23	3	0	0	0	0.92774	1	12321	12321		49.211	1.5535	1	2783100	+		40804	17968	27199	27211	46417	46417					0.05042848805612721
PGLRQHLH	8	Unmodified	_PGLRQHLH_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2735595703125	2	479.272493	956.530432	0.41724	0.00019997	0.49768	0.00023852	0.91492	0.0004385	479.2725825967004	97.562	0.98976	97.953	97.682	98.672	0.39065					61	23	5	0	0	0	0.90024	1	11774	11774		39.021	1.993	1	1576600	+		40805	17968	27199	27211	46418	46418					0.05042848805612721
PGLRQHLH	8	Unmodified	_PGLRQHLH_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27264404296875	2	479.272493	956.530432	1.8674	0.00089498	-1.3746	-0.0006588	0.49279	0.00023618	479.2716678975305	101.7	1.185	102.03	101.74	102.92	0.32511					59	27	4	0	0	0	0.92774	1	12383	12383		49.211	6.8147	1	2945200	+		40806	17968	27199	27211	46419	46419					0.05042848805612721
PGLRSCLLH	9	Carbamidomethyl (C)	_PGLRSC(Carbamidomethyl (C))LLH_	PGLRSC(1)LLH		PGLRSC(69)LLH		0	1	0		ENST00000469531.1_1_7:28448994-28553087:+|nuORF	ENST00000469531.1_1_7:28448994-28553087:+|nuORF	ENST00000469531.1_1_7:28448994-28553087:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8082275390625	2	526.787118	1051.55968	2.0496	0.0010797	-1.2732	-0.00067073	0.77631	0.00040895	526.7861560616558	98.459	0.65525	98.82	98.441	99.096	0.36137					24	15	2	0	0	0	0.20433	1	11848	11848		68.787	35.271	1	247280			40807	12202	27200	27212	46420	46420	152				0.035966250395631505
PGLRSCLLH	9	Carbamidomethyl (C)	_PGLRSC(Carbamidomethyl (C))LLH_	PGLRSC(1)LLH		PGLRSC(85)LLH		0	1	0		ENST00000469531.1_1_7:28448994-28553087:+|nuORF	ENST00000469531.1_1_7:28448994-28553087:+|nuORF	ENST00000469531.1_1_7:28448994-28553087:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.80859375	2	526.787118	1051.55968	2.1589	0.0011373	-0.93644	-0.0004933	1.2224	0.00064396	526.7862408441856	99.872	0.71887	100.24	99.676	100.39	0.36292					22	17	2	0	0	0	0.20115	1	12139	12139		84.916	16.431	1	122630			40808	12202	27200	27212	46421	46421	152				0.035966250395631505
PGLSSSNC	8	Carbamidomethyl (C)	_PGLSSSNC(Carbamidomethyl (C))_	PGLSSSNC(1)		PGLSSSNC(42)		0	1	0			REV__ENSG00000177575|ENST00000432237|CD163	REV__ENSG00000177575|ENST00000432237|CD163	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.1782531738281	2	411.176535	820.338517	1.0732	0.00044126	1.794	0.00073765	2.8672	0.0011789	411.17739510294416	86.843	0.91224	87.289	86.895	87.807	0.44629					47	21	3	0	0	0	0.91005	1	10162	10162		42.474	8.9589	1	1421700	+		40809	22219	27201	27213	46422	46422	269				-0.07883859727542131
PGLSSSNC	8	Carbamidomethyl (C)	_PGLSSSNC(Carbamidomethyl (C))_	PGLSSSNC(1)		PGLSSSNC(41)		0	1	0			REV__ENSG00000177575|ENST00000432237|CD163	REV__ENSG00000177575|ENST00000432237|CD163	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.1782531738281	2	411.176535	820.338517	-0.78686	-0.00032354	3.7845	0.0015561	2.9976	0.0012325	411.1781818459566	86.863	1.1136	87.318	86.896	88.009	0.4543					64	26	5	0	0	0	0.90465	2	10200	10200;10250		40.573	7.057	1	1724500	+		40810	22219	27201	27213	46423;46424	46423	269				-0.07883859727542131
PGLSSSNC	8	Carbamidomethyl (C)	_PGLSSSNC(Carbamidomethyl (C))_					0	1	0			REV__ENSG00000177575|ENST00000432237|CD163	REV__ENSG00000177575|ENST00000432237|CD163	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	411.176535	820.338517	1.0732	0.00044126	1.794	0.00073765	2.8672	0.0011789	411.17739510294416	86.843	0.91224	87.289	86.895	87.807	0.44629	-0.014249	-0.0011679	NaN	42.474	47	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1421700	+		40811	22219	27201	27213			269				-0.07883859727542131
PGLTMHPA	8	Unmodified	_PGLTMHPA_					0	0	0			REV__ENST00000508305.5_1_5:141033496-141033556:-|nuORF	REV__ENST00000508305.5_1_5:141033496-141033556:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.1755065917969	2	412.210181	822.405809	0.25009	0.00010309	-3.8627	-0.0015923	-3.6126	-0.0014892	412.20832315282473	95.034	0.19596	95.453	95.313	95.509	0.41964					7	4	2	0	0	0	0.4196	1	11388	11388		44.531	0	1	135420	+		40812	27924	27202	27214	46425	46425					-0.012497847259510309
PGLVKVVR	8	Unmodified	_PGLVKVVR_					0	0	0		ENSG00000185274|ENST00000333538|GALNT17	ENSG00000185274|ENST00000333538|GALNT17	ENSG00000185274|ENST00000333538|GALNT17	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2519226074219	2	434.292362	866.570172	-1.4491	-0.00062934	3.9625	0.0017209	2.5134	0.0010916	434.292898004605	77.222	0.87918	77.314	77.054	77.933	0.091438					100	43	3	0	0	0	0.4196	1	7233	7233		31.955	0	1	296250			40813	7697	27203	27215	46426	46426					0.13154975756322074
PGLVLPEEAHY	11	Unmodified	_PGLVLPEEAHY_					0	0	0		nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.8790588378906	3	408.880156	1223.61864	-2.1156	-0.00086504	0.68771	0.00028119	-1.4279	-0.00058385	408.8803002562497	23.885	1.1542	23.885	23.413	24.568	0					112	51	3	0	0	0	0.69931	2	766	766;824		31.634	12.668	1	176940			40814	14760	27204	27216	46427;46428	46427					0.015773798148984497
PGLVPETI	8	Unmodified	_PGLVPETI_					0	0	0			REV__ENSG00000162408|ENST00000377705|NOL9	REV__ENSG00000162408|ENST00000377705|NOL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.23779296875	2	413.239461	824.46437	-0.12335	-5.0972E-05	-2.6877	-0.0011107	-2.811	-0.0011616	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.88915	1	7940	7940		35.201	0	1	1978800	+		40815	20811	27205	27217	46429	46429					0.04511595120197853
PGLVRLVRSPD	11	Unmodified	_PGLVRLVRSPD_					0	0	0		ENST00000250024.8_1_11:19261772-19262185:-|nuORF	ENST00000250024.8_1_11:19261772-19262185:-|nuORF	ENST00000250024.8_1_11:19261772-19262185:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5749206542969	3	403.575178	1207.70371	-1.6629	-0.0006711	0.8656	0.00034934	-0.79728	-0.00032176	403.57547967124447	80.497	0.77847	80.602	80.13	80.909	0.10526					53	23	3	0	0	0	0.71803	1	7620	7620		28.577	9.3141	1	234030			40816	9291	27206	27218	46430	46430					0.10816170071370834
PGLVTKQH	8	Unmodified	_PGLVTKQH_					0	0	0			REV__ENSG00000121057|ENST00000337714|AKAP1	REV__ENSG00000121057|ENST00000337714|AKAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.25543212890625	2	440.255977	878.497401	0.19593	8.6259E-05	-1.6575	-0.00072971	-1.4615	-0.00064345	440.2551146527056	74.271	0.95056	74.83	74.543	75.493	0.55891					48	22	3	0	0	0	0.88915	1	8390	8390		35.201	0	1	711020	+		40817	18443	27207	27219	46431	46431					0.05329221962892916
PGMEPAAH	8	Oxidation (M)	_PGM(Oxidation (M))EPAAH_		PGM(1)EPAAH		PGM(47)EPAAH	0	0	1		ENSG00000166963|ENST00000300231|MAP1A;nc|ENSG00000166963|P78559-2|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1828918457031	2	413.18162	824.348688	2.248	0.00092885	-0.1615	-6.6729E-05	2.0865	0.00086212	413.1816917655686	98.102	1.3171	98.488	97.723	99.04	0.38548					84	31	4	0	0	0	0.92176	2	11796	11796;11806		46.766	16.925	1	2862500			40818	6254	27208	27220	46432;46433	46432		107			-0.07051252002304409
PGMEPAAH	8	Oxidation (M)	_PGM(Oxidation (M))EPAAH_		PGM(1)EPAAH		PGM(47)EPAAH	0	0	1		ENSG00000166963|ENST00000300231|MAP1A;nc|ENSG00000166963|P78559-2|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1840515136719	2	413.18162	824.348688	2.34	0.00096685	1.7124	0.00070753	4.0524	0.0016744	413.18263814360023	99.934	1.4742	100.27	99.852	101.33	0.33294					93	36	4	0	0	0	0.92176	1	12053	12053		46.766	18.512	1	6186100			40819	6254	27208	27220	46434	46434		107			-0.07051252002304409
PGMEPAAH	8	Oxidation (M)	_PGM(Oxidation (M))EPAAH_		PGM(1)EPAAH		PGM(47)EPAAH	0	0	1		ENSG00000166963|ENST00000300231|MAP1A;nc|ENSG00000166963|P78559-2|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.18218994140625	2	413.18162	824.348688	1.3894	0.00057407	1.3241	0.0005471	2.7135	0.0011212	413.18241572168455	98.2	1.7988	98.577	97.389	99.188	0.37679					98	43	5	0	0	0	0.92176	1	11840	11840		46.766	9.738	1	2907700			40820	6254	27208	27220	46435	46435		107			-0.07051252002304409
PGMGKCTAS	9	Unmodified	_PGMGKCTAS_					0	0	0		ENST00000473451.1_1_3:49950446-49967283:-|nuORF	ENST00000473451.1_1_3:49950446-49967283:-|nuORF	ENST00000473451.1_1_3:49950446-49967283:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.19140625	2	426.191131	850.367709	1.6375	0.00069788	-1.2347	-0.00052621	0.4028	0.00017167	426.19062560903467	97.031	1.3894	97.436	97.053	98.443	0.40498					97	33	4	0	0	0	0.78536	1	11708	11708		29.15	0	1	6310200			40821	12280	27209	27221	46436	46436					-0.06346038702906753
PGNCQFAS	8	Unmodified	_PGNCQFAS_					0	0	0			REV__ENST00000489062.2_1_9:18905734-18907026:+|nuORF	REV__ENST00000489062.2_1_9:18905734-18907026:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.1755676269531	2	412.173795	822.333038	1.9446	0.00080153	2.2146	0.00091281	4.1593	0.0017143	412.1748947386634	95.507	1.9933	95.449	94.85	96.843	-0.057526					113	46	5	0	0	0	0.90465	1	10199	10199		40.573	0	1	1987400	+		40822	27611	27210	27222	46437	46437					-0.08523538519352769
PGNCQFAS	8	Unmodified	_PGNCQFAS_					0	0	0			REV__ENST00000489062.2_1_9:18905734-18907026:+|nuORF	REV__ENST00000489062.2_1_9:18905734-18907026:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.1758728027344	2	412.173795	822.333038	3.1808	0.001311	1.2721	0.00052433	4.4529	0.0018354	412.17437613638253	95.25	1.8212	95.297	94.748	96.569	0.046989					110	42	4	0	0	0	0.89494	1	10039	10039		37.159	5.2042	1	1735800	+		40823	27611	27210	27222	46438	46438					-0.08523538519352769
PGNCQFAS	8	Unmodified	_PGNCQFAS_					0	0	0			REV__ENST00000489062.2_1_9:18905734-18907026:+|nuORF	REV__ENST00000489062.2_1_9:18905734-18907026:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.1759033203125	2	412.173795	822.333038	2.147	0.00088493	0.97777	0.00040301	3.1247	0.0012879	412.1750523401702	95.065	5.5127	95.497	94.562	100.08	0.4324					346	134	6	0	0	0	0.87922	4	11537	11440;11453;11465;11537		50.025	1.9018	1	146310000	+		40824	27611	27210	27222	46439;46440;46441;46442	46442					-0.08523538519352769
PGNCQFAS	8	Unmodified	_PGNCQFAS_					0	0	0			REV__ENST00000489062.2_1_9:18905734-18907026:+|nuORF	REV__ENST00000489062.2_1_9:18905734-18907026:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.17584228515625	2	412.173795	822.333038	0.33777	0.00013922	2.789	0.0011496	3.1268	0.0012888	412.1757826354691	95.171	5.6015	95.591	94.66	100.26	0.41964					346	137	6	0	0	0	0.92457	3	11556	11509;11521;11556		52.299	7.343	1	156020000	+		40825	27611	27210	27222	46443;46444;46445	46445					-0.08523538519352769
PGNDHSGR	8	Unmodified	_PGNDHSGR_					0	0	0		nc|ENSG00000100346|Q9P0X4-2|CACNA1I;ENSG00000100346|ENST00000402142|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.1913146972656	2	420.191365	838.368178	-1.7658	-0.00074196	1.3644	0.00057331	-0.40136	-0.00016865	420.1920369086779	93.807	1.578	94.036	93.32	94.898	0.22863					60	37	3	0	0	0	0.89494	2	9548	9548;9559		38.806	1.7777	1	1141800			40826	1830	27211	27223	46446;46447	46446					-0.05747159667180313
PGNDHSGR	8	Unmodified	_PGNDHSGR_					0	0	0		nc|ENSG00000100346|Q9P0X4-2|CACNA1I;ENSG00000100346|ENST00000402142|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.1916809082031	2	420.191365	838.368178	0.67268	0.00028266	-0.57109	-0.00023997	0.1016	4.2691E-05	420.19102587354894	93.944	2.1015	94.105	93.532	95.634	0.16118					67	50	2	0	0	0	0.87479	1	9557	9557		30.504	2.2494	1	1208700			40827	1830	27211	27223	46448	46448					-0.05747159667180313
PGNDHSGR	8	Unmodified	_PGNDHSGR_					0	0	0		nc|ENSG00000100346|Q9P0X4-2|CACNA1I;ENSG00000100346|ENST00000402142|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.19219970703125	2	420.191365	838.368178	-1.885	-0.00079204	2.0573	0.00086445	0.17233	7.2411E-05	420.192116172397	93.945	2.7081	94.143	92.357	95.065	0.19827					82	64	2	0	0	0	0.89962	1	9538	9538		38.806	1.7777	1	1157900			40828	1830	27211	27223	46449	46449					-0.05747159667180313
PGNDHSGR	8	Unmodified	_PGNDHSGR_					0	0	0		nc|ENSG00000100346|Q9P0X4-2|CACNA1I;ENSG00000100346|ENST00000402142|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.1913757324219	2	420.191365	838.368178	1.7374	0.00073004	-2.4837	-0.0010436	-0.7463	-0.00031359	420.1905572526673	93.928	4.8779	94.369	91.96	96.838	0.44099					240	120	3	0	0	0	0.89494	7	11153	11153;11165;11177;11215;11224;11232;11254		49.442	8.8689	1	4179400			40829	1830	27211	27223	46450;46451;46452;46453;46454;46455;46456	46450					-0.05747159667180313
PGNDHSGR	8	Unmodified	_PGNDHSGR_					0	0	0		nc|ENSG00000100346|Q9P0X4-2|CACNA1I;ENSG00000100346|ENST00000402142|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.19140625	2	420.191365	838.368178	-0.017504	-7.3551E-06	0.10202	4.2869E-05	0.084518	3.5514E-05	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.89043	9	11112	11112;11208;11219;11229;11241;11269;11286;11316;11328		55.504	14.932	1	4147200			40830	1830	27211	27223	46457;46458;46459;46460;46461;46462;46463;46464;46465	46457					-0.05747159667180313
PGNFLYCTFY	10	Unmodified	_PGNFLYCTFY_					0	0	0		ENSG00000145375|ENST00000274008|SPATA5;nc|ENSG00000145375|Q8NB90-2|AFG2A;ENST00000422835.2_1_4:123844270-124023368:+|nuORF;nc|ENSG00000145375|Q8NB90-3|AFG2A	ENSG00000145375|ENST00000274008|SPATA5	ENSG00000145375|ENST00000274008|SPATA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.7752685546875	2	612.773342	1223.53213	-0.29935	-0.00018344	1.9448	0.0011917	1.6455	0.0010083	612.7745846223667	51.863	0.98487	51.861	51.526	52.511	-0.0020447					49	22	3	0	0	0	0.74274	1	4478	4478		42.396	1.618	1	349660			40831	4767	27212	27224	46466	46466					-0.07069323011319284
PGNILLQLRQG	11	Unmodified	_PGNILLQLRQG_					0	0	0		nc|ENSG00000100991|Q8TEL6-2|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;ENSG00000100991|ENST00000252015|TRPC4AP	nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.85888671875	2	604.859129	1207.70371	0.73307	0.0004434	-1.8968	-0.0011473	-1.1637	-0.00070389	604.857969611277	81.761	1.4227	81.906	80.909	82.331	0.14551					61	32	3	0	0	0	0.71207	1	7838	7838		19.997	7.7901	1	397570			40832	1891	27213	27225	46467	46467					0.10816170071370834
PGNILLQLRQG	11	Unmodified	_PGNILLQLRQG_					0	0	0		nc|ENSG00000100991|Q8TEL6-2|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;ENSG00000100991|ENST00000252015|TRPC4AP	nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747985839844	3	403.575178	1207.70371	-0.21515	-8.6831E-05	-0.71244	-0.00028752	-0.9276	-0.00037436	403.57486213587435	79.28	1.3173	79.83	78.938	80.256	0.54945					66	30	3	0	0	0	0.67041	1	9095	9095		36.318	7.7409	1	2125200			40833	1891	27213	27225	46468	46468					0.10816170071370834
PGNKRPLSA	9	Unmodified	_PGNKRPLSA_					0	0	0		nc|ENSG00000184672|Q86SE5-2|RALYL;ENSG00000184672|ENST00000521268|RALYL;nc|ENSG00000184672|Q86SE5-3|RALYL	nc|ENSG00000184672|Q86SE5-2|RALYL	nc|ENSG00000184672|Q86SE5-2|RALYL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.2720947265625	2	470.272158	938.529764	0.099415	4.6752E-05	-0.22805	-0.00010725	-0.12864	-6.0495E-05	470.2720226453988	92.144	2.4368	92.19	91.141	93.578	0.045456					134	57	4	0	0	0	0.7932	1	9637	9637		23.042	0	1	1955400			40834	7636	27214	27226	46469	46469					0.058040093658974
PGNKSCSE	8	Unmodified	_PGNKSCSE_					0	0	0			REV__nc|ENSG00000100239|O75170-6|PPP6R2	REV__nc|ENSG00000100239|O75170-6|PPP6R2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.1780700683594	2	411.176535	820.338517	1.0732	0.00044126	1.794	0.00073765	2.8672	0.0011789	411.17739510294416	86.843	0.91224	87.289	86.895	87.807	0.44629					47	21	3	0	0	0	0.87922	1	10174	10174		31.955	5.1588	1	1421700	+		40835	17156	27215	27227	46470	46470					-0.07883859727542131
PGNQKLRKAPV	11	Unmodified	_PGNQKLRKAPV_					0	0	0		nc|ENSG00000116127|Q8TCU4-2|ALMS1;ENSG00000116127|ENST00000613296|ALMS1;nc|ENSG00000116127|Q8TCU4-3|ALMS1	nc|ENSG00000116127|Q8TCU4-2|ALMS1	nc|ENSG00000116127|Q8TCU4-2|ALMS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3659057617188	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.76699	1	12242	12242		18.262	4.125	1	3346600			40836	2899	27216	27228	46471	46471					0.12459876308275852
PGPAVLLTG	9	Unmodified	_PGPAVLLTG_					0	0	0		ENST00000316586.8_1_2:242434694-242435003:-|nuORF	ENST00000316586.8_1_2:242434694-242435003:-|nuORF	ENST00000316586.8_1_2:242434694-242435003:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.74627685546875	2	412.747453	823.480354	-1.81	-0.00074707	-1.0377	-0.00042831	-2.8477	-0.0011754	412.74693613939564	84.91	2.7925	85.06	84.234	87.026	0.14951					114	64	4	0	0	0	0.77546	1	8269	8269		31.955	5.1588	1	976210			40837	9986	27217	27229	46472	46472					0.061553013571028714
PGPCTEVH	8	Unmodified	_PGPCTEVH_					0	0	0			REV__ENST00000542274.5_1_16:68679206-68732300:+|nuORF	REV__ENST00000542274.5_1_16:68679206-68732300:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.192626953125	2	420.189445	838.364338	0.67269	0.00028266	3.9981	0.0016799	4.6708	0.0019626	420.19102587354894	93.944	2.1015	94.105	93.532	95.634	0.16118					67	50	2	0	0	0	0.89457	1	9592	9592		37.028	0	1	1208700	+		40838	28495	27218	27230	46473	46473					-0.061309654852720996
PGPDCVLH	8	Unmodified	_PGPDCVLH_					0	0	0			REV__ENSG00000176219|ENST00000315519|OR11H6	REV__ENSG00000176219|ENST00000315519|OR11H6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1844787597656	2	419.199813	836.385073	0.74886	0.00031392	2.9977	0.0012566	3.7466	0.0015706	419.20134698598764	86.864	0.95348	87.31	86.978	87.932	0.44628					47	22	3	0	0	0	0.4196	1	10163	10163		44.531	30.756	1	332090	+		40839	22115	27219	27231	46474	46474					-0.03966375105596853
PGPELVPV	8	Unmodified	_PGPELVPV_					0	0	0		ENST00000421767.1_1_7:65841945-65842656:-|nuORF	ENST00000421767.1_1_7:65841945-65842656:-|nuORF	ENST00000421767.1_1_7:65841945-65842656:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.23187255859375	2	404.234179	806.453805	-1.8204	-0.00073588	-0.96943	-0.00039188	-2.7898	-0.0011278	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.82464	1	8215	8215		21.702	0	1	4754100			40840	11470	27220	27232	46475	46475					0.04283612465758324
PGPGLRGPHG	10	Unmodified	_PGPGLRGPHG_					0	0	0			REV__ENST00000378078.4_1_9:35756525-35756705:+|nuORF	REV__ENST00000378078.4_1_9:35756525-35756705:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7557373046875	2	472.756675	943.498798	0.60168	0.00028445	-1.985	-0.00093841	-1.3833	-0.00065396	472.75559990844266	25.1	0.58479	25.151	24.858	25.443	0.050451					37	20	2	0	0	0	0.86452	1	992	992		30.504	0.18592	1	95939	+		40841	25886	27221	27233	46476	46476					0.024788560516640246
PGPGPATSARL	11	Unmodified	_PGPGPATSARL_					0	0	0			REV__ENST00000330181.9_1_16:29467016-29467133:+|nuORF	REV__ENST00000330181.9_1_16:29467016-29467133:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2836303710938	2	512.282723	1022.55089	-1.5312	-0.00078441	-1.1667	-0.00059769	-2.6979	-0.0013821	512.2820384248688	86.195	3.9563	86.353	85.285	89.241	0.15851					164	92	2	0	0	0	0.7144	1	8419	8419		29.17	1.2878	1	356130	+		40842	25104	27222	27234	46477	46477					0.0405197467475773
PGPGPPPAAR	10	Unmodified	_PGPGPPPAAR_					0	0	0		ENST00000426902.5_1_19:18273817-18280101:+|nuORF;ENSG00000105647|ENST00000222254|PIK3R2	ENST00000426902.5_1_19:18273817-18280101:+|nuORF	ENST00000426902.5_1_19:18273817-18280101:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	458.7871398925781	2	458.753601	915.49265	-0.12853	-5.8963E-05	1.6605	0.00076175	1.5319	0.00070279	458.75518896337326	93.327	1.5973	93.397	92.069	93.666	0.069595					49	37	2	0	0	0	0.37624	1	9664	9664		44.117	0	1	121550			40843	2232	27223	27235	46478	46478					0.0315233782012001
PGPGRREA	8	Unmodified	_PGPGRREA_					0	0	0			REV__ENST00000463982.2_1_3:137890290-137893637:-|nuORF	REV__ENST00000463982.2_1_3:137890290-137893637:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.2275695800781	2	420.227751	838.440949	0.042435	1.7832E-05	0.092754	3.8978E-05	0.13519	5.681E-05	420.2277069932212	78.969	5.8282	79.518	76.332	82.16	0.54945					273	145	3	0	0	0	0.87479	1	9083	9083		30.504	1.3541	1	581780	+		40844	19451	27224	27236	46479	46479					0.015265941262214255
PGPGRRLARL	10	Unmodified	_PGPGRRLARL_					0	0	0			REV__ENSG00000197912|ENST00000645818|SPG7	REV__ENSG00000197912|ENST00000645818|SPG7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.84033203125	2	546.841074	1091.66759	0.19665	0.00010754	-2.8678	-0.0015682	-2.6712	-0.0014607	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.84112	1	10490	10490		37.159	8.0096	1	55511000	+		40845	23279	27225	27237	46480	46480					0.12542757685173456
PGPGRRLARL	10	Unmodified	_PGPGRRLARL_					0	0	0			REV__ENSG00000197912|ENST00000645818|SPG7	REV__ENSG00000197912|ENST00000645818|SPG7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.84033203125	2	546.841074	1091.66759	0.84844	0.00046396	-3.1925	-0.0017458	-2.3441	-0.0012818	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.86452	1	10684	10684		30.504	0	1	43597000	+		40846	23279	27225	27237	46481	46481					0.12542757685173456
PGPIHRAH	8	Unmodified	_PGPIHRAH_					0	0	0			REV__ENST00000502486.5_2_4:42153705-42154329:-|nuORF	REV__ENST00000502486.5_2_4:42153705-42154329:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7445068359375	2	442.746111	883.477669	0.70525	0.00031225	-3.6345	-0.0016091	-2.9292	-0.0012969	442.7443686579111	91.271	2.0811	91.72	90.611	92.692	0.44958					87	49	3	0	0	0	0.90024	1	10841	10841		39.021	0.21535	1	3166400	+		40847	27820	27226	27238	46482	46482					0.03126890742805699
PGPIVVHC	8	Unmodified	_PGPIVVHC_					0	0	0		ENST00000492977.5_1_1:202119404-202127449:-|nuORF;ENSG00000143851|ENST00000691036|PTPN7;nc|ENSG00000143851|P35236-2|PTPN7;nc|ENSG00000143851|P35236-3|PTPN7	ENST00000492977.5_1_1:202119404-202127449:-|nuORF	ENST00000492977.5_1_1:202119404-202127449:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	411.2171630859375	2	411.220549	820.426544	-1.817	-0.00074717	1.3709	0.00056374	-0.44607	-0.00018343	411.2205662131835	87.047	2.511	87.241	85.067	87.578	0.19379					79	58	2	0	0	0	0.80127	1	8570	8570		16.705	0	1	245210			40848	4669	27227	27239	46483	46483					0.009148056537242155
PGPKPGWKK	9	Unmodified	_PGPKPGWKK_					0	0	0		ENST00000569426.1_1_16:89790014-89799821:+|nuORF;ENST00000563541.1_1_16:89789946-89799821:+|nuORF;ENST00000561536.5_1_16:89789452-89804651:+|nuORF;nc|ENSG00000158805|Q8N554-2|ZNF276;ENSG00000158805|ENST00000443381|ZNF276	ENST00000569426.1_1_16:89790014-89799821:+|nuORF	ENST00000569426.1_1_16:89790014-89799821:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.79541015625	2	497.795269	993.575986	-0.62467	-0.00031096	1.8609	0.00092635	1.2362	0.0006154	497.7959443257759	48.896	1.0734	48.921	48.637	49.71	0.025574					60	26	3	0	0	0	0.7932	1	3767	3767		21.96	2.5999	1	414050			40849	5496	27228	27240	46484	46484					0.0789407426799471
PGPNWGSH	8	Unmodified	_PGPNWGSH_					0	0	0			REV__ENST00000593993.6_1_19:18191665-18193002:-|nuORF	REV__ENST00000593993.6_1_19:18191665-18193002:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.1914978027344	2	426.193377	850.372201	-0.81474	-0.00034724	-4.1663	-0.0017757	-4.9811	-0.0021229	426.1917333456714	91.33	1.6507	91.801	91.36	93.011	0.47068					112	38	5	0	0	0	0.90465	1	10888	10888		40.573	12.318	1	3110500	+		40850	29234	27229	27241	46485	46485					-0.05897070173477914
PGPPFSRGRK	10	Unmodified	_PGPPFSRGRK_					0	0	0		ENST00000342963.2_1_7:5459979-5460210:+|nuORF	ENST00000342963.2_1_7:5459979-5460210:+|nuORF	ENST00000342963.2_1_7:5459979-5460210:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.8097534179688	2	549.811982	1097.60941	0.31767	0.00017466	-3.8558	-0.00212	-3.5382	-0.0019453	549.8099077236782	16.373	0.19002	16.293	16.191	16.381	-0.080017					9	6	2	0	0	0	0.85939	1	103	103		23.042	0.46283	1	61794			40851	10271	27230	27242	46486	46486					0.06451076039888903
PGPPKVLGLQG	11	Unmodified	_PGPPKVLGLQG_					0	0	0		ENST00000546677.1_1_12:72083426-72090218:+|nuORF	ENST00000546677.1_1_12:72083426-72090218:+|nuORF	ENST00000546677.1_1_12:72083426-72090218:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.81640625	2	531.818941	1061.62333	-0.57494	-0.00030576	-2.9667	-0.0015777	-3.5416	-0.0018835	531.8173324364058	101.39	0.86312	101.39	101.04	101.9	0					47	20	3	0	0	0	0.75495	1	10355	10355		20.947	0	1	388100			40852	13593	27231	27243	46487	46487					0.09498308748334239
PGPPPKVSKA	10	Unmodified	_PGPPPKVSKA_					0	0	0		ENSG00000105085|ENST00000263390|MED26	ENSG00000105085|ENST00000263390|MED26	ENSG00000105085|ENST00000263390|MED26	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.2910461425781	2	489.292559	976.570566	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.685	1	16.603	16.103	17.103	-0.0821								0	0	0	0.45132	1	162	162		23.523	5.1983	1				40853	2183	27232	27244	46488	46488					0.0813435068552053
PGPRRLPPAS	10	Unmodified	_PGPRRLPPAS_					0	0	0		ENST00000557446.5_1_14:62162238-62162376:+|nuORF	ENST00000557446.5_1_14:62162238-62162376:+|nuORF	ENST00000557446.5_1_14:62162238-62162376:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8270263671875	2	524.306532	1046.59851	-1.5358	-0.00080523	-1.7842	-0.00093546	-3.32	-0.0017407	524.8068833841178	98.839	0.22054	99.025	98.853	99.074	0.18582					5	4	2	0	0	0	0.37624	1	10197	10197		37.159	15.457	1	34306			40854	13775	27233	27245	46489	46489					0.07707673665595394
PGPRRPRRPRR	11	Unmodified	_PGPRRPRRPRR_					0	0	0			REV__ENSG00000116014|ENST00000234371|KISS1R	REV__ENSG00000116014|ENST00000234371|KISS1R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.62322998046875	3	467.62386	1399.84975	-1.7204	-0.00080451	1.3819	0.00064623	-0.33847	-0.00015828	467.62444178196154	107.87	0.60316	107.91	107.33	107.93	0.036118					61	14	6	0	0	0	0.76579	1	11511	11511		18.531	0	1	13916000	+		40855	18169	27234	27246	46490	46490					0.16581910150625845
PGPRVPRP	8	Unmodified	_PGPRVPRP_					0	0	0		ENST00000601150.5_1_19:59059745-59059933:+|nuORF	ENST00000601150.5_1_19:59059745-59059933:+|nuORF	ENST00000601150.5_1_19:59059745-59059933:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2621154785156	2	438.264136	874.51372	0.15263	6.689E-05	-1.9074	-0.00083592	-1.7547	-0.00076903	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.86288	1	2149	2149		26.796	4.8362	1	11370000			40856	14387	27235	27247	46491	46491					0.07144347919654592
PGPSCDLH	8	Unmodified	_PGPSCDLH_					0	0	0		ENST00000491848.1_1_1:247323168-247335235:-|nuORF	ENST00000491848.1_1_1:247323168-247335235:-|nuORF	ENST00000491848.1_1_1:247323168-247335235:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1832580566406	2	413.18162	824.348688	2.248	0.00092885	-0.1615	-6.6729E-05	2.0865	0.00086212	413.1816917655686	98.102	1.3171	98.488	97.723	99.04	0.38548					84	31	4	0	0	0	0.884	2	11833	11786;11833		46.766	5.2613	1	2862500			40857	12693	27236	27248	46492;46493	46493					-0.07051252002315778
PGPSCDLH	8	Unmodified	_PGPSCDLH_					0	0	0		ENST00000491848.1_1_1:247323168-247335235:-|nuORF	ENST00000491848.1_1_1:247323168-247335235:-|nuORF	ENST00000491848.1_1_1:247323168-247335235:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.18389892578125	2	413.18162	824.348688	2.3001	0.00095037	1.4681	0.00060658	3.7682	0.0015569	413.18257983004736	99.112	0.94866	99.474	99.096	100.04	0.36137					76	23	5	0	0	0	0.86791	1	11946	11946		28.254	0	1	10767000			40858	12693	27236	27248	46494	46494					-0.07051252002315778
PGPSCDLH	8	Unmodified	_PGPSCDLH_					0	0	0		ENST00000491848.1_1_1:247323168-247335235:-|nuORF	ENST00000491848.1_1_1:247323168-247335235:-|nuORF	ENST00000491848.1_1_1:247323168-247335235:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.18359375	2	413.18162	824.348688	1.7261	0.00071319	1.9929	0.00082343	3.719	0.0015366	413.182822541021	99.146	0.82581	99.509	99.135	99.961	0.36292					79	20	5	0	0	0	0.86791	2	11989	11989;12038		28.254	0	1	11472000			40859	12693	27236	27248	46495;46496	46495					-0.07051252002315778
PGPSCPEH	8	Unmodified	_PGPSCPEH_					0	0	0			REV__chr11:73646626-73649012|20|18.4|0.99|4.21|+|2|PLEKHB1,PLEKHB1|1	REV__chr11:73646626-73649012|20|18.4|0.99|4.21|+|2|PLEKHB1,PLEKHB1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.1758117675781	2	412.173795	822.333038	1.9446	0.00080153	2.2146	0.00091281	4.1593	0.0017143	412.1748947386634	95.507	1.9933	95.449	94.85	96.843	-0.057526					113	46	5	0	0	0	0.9159	1	10224	10224		44.531	3.9584	1	1987400	+		40860	15506	27237	27249	46497	46497					-0.08523538519352769
PGPSCPEH	8	Unmodified	_PGPSCPEH_					0	0	0			REV__chr11:73646626-73649012|20|18.4|0.99|4.21|+|2|PLEKHB1,PLEKHB1|1	REV__chr11:73646626-73649012|20|18.4|0.99|4.21|+|2|PLEKHB1,PLEKHB1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.1756591796875	2	412.173795	822.333038	3.1808	0.001311	1.2721	0.00052433	4.4529	0.0018354	412.17437613638253	95.25	1.8212	95.297	94.748	96.569	0.046989					110	42	4	0	0	0	0.9159	4	10051	10051;10062;10074;10087		46.766	12.576	1	1735800	+		40861	15506	27237	27249	46498;46499;46500;46501	46498					-0.08523538519352769
PGPSCPEH	8	Unmodified	_PGPSCPEH_					0	0	0			REV__chr11:73646626-73649012|20|18.4|0.99|4.21|+|2|PLEKHB1,PLEKHB1|1	REV__chr11:73646626-73649012|20|18.4|0.99|4.21|+|2|PLEKHB1,PLEKHB1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.17578125	2	412.173795	822.333038	0.68034	0.00028042	3.535	0.001457	4.2153	0.0017374	412.17540320072595	94.733	2.5486	94.896	94.33	96.878	0.16307					175	60	5	0	0	0	0.88915	6	9748	9673;9697;9710;9723;9735;9748		54.765	19.564	1	14144000	+		40862	15506	27237	27249	46502;46503;46504;46505;46506;46507	46507					-0.08523538519352769
PGPSCPEH	8	Unmodified	_PGPSCPEH_					0	0	0			REV__chr11:73646626-73649012|20|18.4|0.99|4.21|+|2|PLEKHB1,PLEKHB1|1	REV__chr11:73646626-73649012|20|18.4|0.99|4.21|+|2|PLEKHB1,PLEKHB1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.176025390625	2	412.173795	822.333038	2.147	0.00088493	0.97777	0.00040301	3.1247	0.0012879	412.1750523401702	95.065	5.5127	95.497	94.562	100.08	0.4324					346	134	6	0	0	0	0.88915	12	11392	11321;11332;11344;11356;11368;11380;11392;11404;11416;11428;11489;11500		54.765	18.127	1	146310000	+		40863	15506	27237	27249	46508;46509;46510;46511;46512;46513;46514;46515;46516;46517;46518;46519	46514					-0.08523538519352769
PGPSCPEH	8	Unmodified	_PGPSCPEH_					0	0	0			REV__chr11:73646626-73649012|20|18.4|0.99|4.21|+|2|PLEKHB1,PLEKHB1|1	REV__chr11:73646626-73649012|20|18.4|0.99|4.21|+|2|PLEKHB1,PLEKHB1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.17572021484375	2	412.173795	822.333038	0.33777	0.00013922	2.789	0.0011496	3.1268	0.0012888	412.1757826354691	95.171	5.6015	95.591	94.66	100.26	0.41964					346	137	6	0	0	0	0.89457	12	11484	11378;11388;11400;11412;11424;11436;11448;11460;11484;11568;11607;11618		54.765	17.736	1	156020000	+		40864	15506	27237	27249	46520;46521;46522;46523;46524;46525;46526;46527;46528;46529;46530;46531	46528					-0.08523538519352769
PGPVAPTRRR	10	Unmodified	_PGPVAPTRRR_					0	0	0			REV__ENST00000505654.1_2_5:102201638-102201800:+|nuORF	REV__ENST00000505654.1_2_5:102201638-102201800:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8306274414062	2	553.830706	1105.64686	-0.78325	-0.00043379	0.37135	0.00020567	-0.4119	-0.00022812	553.8307618175877	102.64	0.65639	102.65	102.39	103.05	0.0082016					47	15	4	0	0	0	0.85466	1	11001	11001		20.947	0.95016	1	552570	+		40865	27886	27238	27250	46532	46532					0.09826167305504896
PGQAQCYG	8	Unmodified	_PGQAQCYG_					0	0	0			REV__ENST00000529132.1_1_11:67173299-67173527:+|nuORF	REV__ENST00000529132.1_1_11:67173299-67173527:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.17578125	2	412.173795	822.333038	0.33777	0.00013922	2.789	0.0011496	3.1268	0.0012888	412.1757826354691	95.171	5.6015	95.591	94.66	100.26	0.41964					346	137	6	0	0	0	0.89457	1	11472	11472		37.028	0	1	156020000	+		40866	28261	27239	27251	46533	46533					-0.08523538519352769
PGQEVKRSA	9	Unmodified	_PGQEVKRSA_					0	0	0			REV__nc|ENSG00000146147|Q5VWP3-1|MLIP	REV__nc|ENSG00000146147|Q5VWP3-1|MLIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.26690673828125	2	486.267073	970.519593	1.0382	0.00050483	-0.85752	-0.00041699	0.18065	8.7843E-05	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.78528	1	9098	9098		29.17	0.91578	1	1819100	+		40867	19991	27240	27252	46534	46534					0.03315401640657001
PGQFLPVR	8	Unmodified	_PGQFLPVR_					0	0	0			REV__nc|ENSG00000067445|Q12816-2|TRO	REV__nc|ENSG00000067445|Q12816-2|TRO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2636413574219	2	457.266345	912.518136	-0.13162	-6.0186E-05	-4.207	-0.0019237	-4.3386	-0.0019839	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.87922	1	7935	7935		31.955	3.7006	1	1194000	+		40868	16543	27241	27253	46535	46535					0.05837812342565485
PGQFLPVR	8	Unmodified	_PGQFLPVR_					0	0	0			REV__nc|ENSG00000067445|Q12816-2|TRO	REV__nc|ENSG00000067445|Q12816-2|TRO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.263427734375	2	457.266345	912.518136	-0.94036	-0.00042999	-3.4538	-0.0015793	-4.3941	-0.0020093	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.85277	1	9674	9674		25.45	1.2474	1	3505500	+		40869	16543	27241	27253	46536	46536					0.05837812342565485
PGQFLPVR	8	Unmodified	_PGQFLPVR_					0	0	0			REV__nc|ENSG00000067445|Q12816-2|TRO	REV__nc|ENSG00000067445|Q12816-2|TRO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.26324462890625	2	457.266345	912.518136	-0.11988	-5.4815E-05	-4.2684	-0.0019518	-4.3883	-0.0020066	457.26428644836	79.385	2.7838	79.935	78.442	81.226	0.54945					170	65	4	0	0	0	0.90465	1	9257	9257		40.573	1.7665	1	1064700	+		40870	16543	27241	27253	46537	46537					0.05837812342565485
PGQFRVPL	8	Unmodified	_PGQFRVPL_					0	0	0			REV__ENST00000222345.10_1_19:38571927-38572134:+|nuORF	REV__ENST00000222345.10_1_19:38571927-38572134:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2628479003906	2	457.266345	912.518136	-0.13162	-6.0186E-05	-4.207	-0.0019237	-4.3386	-0.0019839	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.86288	1	7700	7700		26.796	1.3459	1	1194000	+		40871	24161	27242	27254	46538	46538					0.05837812342565485
PGQGGIWLI	9	Unmodified	_PGQGGIWLI_					0	0	0		ENST00000606250.1_1_10:31607570-31607903:-|nuORF	ENST00000606250.1_1_10:31607570-31607903:-|nuORF	ENST00000606250.1_1_10:31607570-31607903:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7642517089844	2	470.766178	939.517802	-1.9239	-0.00090572	1.9879	0.00093583	0.06397	3.0115E-05	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.7932	1	1480	1480		26.796	0	1	93177			40872	14443	27243	27255	46539	46539					0.04562392622710831
PGQKEKRVRP	10	Unmodified	_PGQKEKRVRP_					0	0	0		nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2	nc|ENSG00000167674|Q7Z4V5-2|HDGFL2	nc|ENSG00000167674|Q7Z4V5-2|HDGFL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.85498046875	2	597.856921	1193.69929	-0.4308	-0.00025756	-0.72556	-0.00043378	-1.1564	-0.00069134	597.8562580242035	92.27	2.7665	92.315	90.514	93.28	0.045448					217	66	5	0	0	0	0.85981	1	9525	9525		35.152	11.629	1	1998300			40873	6315	27244	27256	46540	46540					0.11018705648439209
PGQKEKRVRP	10	Unmodified	_PGQKEKRVRP_					0	0	0		nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2	nc|ENSG00000167674|Q7Z4V5-2|HDGFL2	nc|ENSG00000167674|Q7Z4V5-2|HDGFL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8557739257812	2	597.856921	1193.69929	0.8216	0.0004912	-2.0016	-0.0011967	-1.18	-0.00070545	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.82886	1	9208	9208		37.812	2.1932	1	2486400			40874	6315	27244	27256	46541	46541					0.11018705648439209
PGQKKAER	8	Unmodified	_PGQKKAER_					0	0	0			REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2640075683594	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.87064	1	8029	8029		29.15	2.4566	1	4511100	+		40875	29739	27245	27257	46542	46542					0.054357228488470355
PGQKKAER	8	Unmodified	_PGQKKAER_					0	0	0			REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2637939453125	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.89494	1	8091	8091		37.159	2.9866	1	4597500	+		40876	29739	27245	27257	46543	46543					0.054357228488470355
PGQKTRLSE	9	Unmodified	_PGQKTRLSE_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2799072265625	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.69624	1	8708	8708		40.778	0	1	1954800	+		40877	18793	27246	27258	46544	46544					0.03911670812124157
PGQMPQQRLIR	11	Unmodified	_PGQMPQQRLIR_					0	0	0		nc|ENSG00000215117|Q9Y4M8|LINC00588	nc|ENSG00000215117|Q9Y4M8|LINC00588	nc|ENSG00000215117|Q9Y4M8|LINC00588	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.3857421875	3	441.915318	1322.72412	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.26	1	115.19	114.69	115.69	-0.072342								0	0	0	0.56276	1	12438	12438		13.508	0	1				40878	15252	27247	27259	46545	46545					0.07567017459518866
PGQPQRVQVR	10	Unmodified	_PGQPQRVQVR_					0	0	0		ENST00000277541.6_1_9:139407974-139409012:-|nuORF	ENST00000277541.6_1_9:139407974-139409012:-|nuORF	ENST00000277541.6_1_9:139407974-139409012:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.8330078125	2	582.833446	1163.65234	0.82789	0.00048252	-2.0883	-0.0012171	-1.2604	-0.00073462	582.8322150120989	94.225	3.555	94.386	93.365	96.92	0.16119					184	84	3	0	0	0	0.8608	1	9664	9664		34.173	5.023	1	780120			40879	9606	27248	27260	46546	46546					0.07705846097314861
PGQQGKYRG	9	Unmodified	_PGQQGKYRG_					0	0	0		nc|ENSG00000168488|Q8WWM7-6|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;ENSG00000168488|ENST00000336783|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.2605895996094	2	495.759415	989.504277	-1.9425	-0.00096301	2.7963	0.0013863	0.85379	0.00042327	495.7602537576442	19.302	1.1114	19.302	18.834	19.945	0					76	43	2	0	0	0	0.7932	1	378	378		24.203	1.1603	1	56551			40880	6405	27249	27261	46547	46547					0.009105348434673033
PGQQVGASQF	10	Unmodified	_PGQQVGASQF_					0	0	0		ENST00000561720.5_1_16:58529427-58541082:+|nuORF;nc|ENSG00000103034|Q9ULP0-4|NDRG4;nc|ENSG00000103034|Q9ULP0-2|NDRG4;ENSG00000103034|ENST00000570248|NDRG4;nc|ENSG00000103034|Q9ULP0-8|NDRG4;nc|ENSG00000103034|Q9ULP0-5|NDRG4;nc|ENSG00000103034|Q9ULP0-7|NDRG4;nc|ENSG00000103034|Q9ULP0-3|NDRG4;nc|ENSG00000103034|Q9ULP0-6|NDRG4	ENST00000561720.5_1_16:58529427-58541082:+|nuORF	ENST00000561720.5_1_16:58529427-58541082:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.75067138671875	2	509.751256	1017.48796	-1.5066	-0.000768	1.1842	0.00060364	-0.32243	-0.00016436	509.75170848529905	45.508	0.60259	45.508	45.213	45.815	0					32	14	3	0	0	0	0.67571	1	3371	3371		45.972	0.020292	1	141490			40881	2043	27250	27262	46548	46548					-0.020085911132809997
PGQRGNKL	8	Unmodified	_PGQRGNKL_					0	0	0		nc|ENSG00000100099|Q9NQG7-3|HPS4;ENSG00000100099|ENST00000398145|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4;ENST00000496385.5_1_22:26849136-26861668:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000429411.5_1_22:26849201-26866860:-|nuORF	nc|ENSG00000100099|Q9NQG7-3|HPS4	nc|ENSG00000100099|Q9NQG7-3|HPS4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25140380859375	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.86288	1	7489	7489		26.796	1.3459	1	2743300			40882	1796	27251	27263	46549	46549					0.048394536773685104
PGQVARKN	8	Unmodified	_PGQVARKN_					0	0	0			REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25152587890625	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.884	1	7522	7522		33.516	1.5607	1	1788100	+		40883	17343	27252	27264	46550	46550					0.048394536773685104
PGQVARKN	8	Unmodified	_PGQVARKN_					0	0	0			REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25146484375	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.85277	2	7729	7729;8019		40.573	1.7665	1	2823900	+		40884	17343	27252	27264	46551;46552	46551					0.048394536773685104
PGQVARKN	8	Unmodified	_PGQVARKN_					0	0	0			REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2514343261719	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.85277	4	7865	7865;7889;7921;8037		31.955	1.4512	1	3370400	+		40885	17343	27252	27264	46553;46554;46555;46556	46553					0.048394536773685104
PGQVARKN	8	Unmodified	_PGQVARKN_					0	0	0			REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2514343261719	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.79929	4	8005	7444;7622;7668;8005		31.955	6.5047	1	3322700	+		40886	17343	27252	27264	46557;46558;46559;46560	46560					0.048394536773685104
PGQVARKN	8	Unmodified	_PGQVARKN_					0	0	0			REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2516784667969	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.85277	8	7441	7441;7452;7479;7546;7556;7565;7677;7711		40.573	12.318	1	2743300	+		40887	17343	27252	27264	46561;46562;46563;46564;46565;46566;46567;46568	46561					0.048394536773685104
PGQVARKN	8	Unmodified	_PGQVARKN_					0	0	0			REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2513427734375	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.90465	1	7613	7613		40.573	10.069	1	2494100	+		40888	17343	27252	27264	46569	46569					0.048394536773685104
PGQVARKN	8	Unmodified	_PGQVARKN_					0	0	0			REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	REV__nc|ENSG00000102524|Q9Y275-3|TNFSF13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2515563964844	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.884	1	9024	9024		33.516	0	1	2235800	+		40889	17343	27252	27264	46570	46570					0.048394536773685104
PGQVPRVVLSR	11	Unmodified	_PGQVPRVVLSR_					0	0	0		ENST00000261205.8_1_12:79258472-79371593:+|nuORF	ENST00000261205.8_1_12:79258472-79371593:+|nuORF	ENST00000261205.8_1_12:79258472-79371593:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2467956542969	3	403.247173	1206.71969	-0.96192	-0.00038789	0.31664	0.00012768	-0.64528	-0.00026021	403.2472281244655	104.88	3.5231	104.88	103.72	107.24	0					230	83	5	0	0	0	0.74763	1	10882	10882		15.337	0	1	5402700			40890	9396	27253	27265	46571	46571					0.12459876308253115
PGQVPRVVLSR	11	Unmodified	_PGQVPRVVLSR_					0	0	0		ENST00000261205.8_1_12:79258472-79371593:+|nuORF	ENST00000261205.8_1_12:79258472-79371593:+|nuORF	ENST00000261205.8_1_12:79258472-79371593:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2467956542969	3	403.247173	1206.71969	-0.18602	-7.5014E-05	-0.48244	-0.00019454	-0.66847	-0.00026956	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.77061	1	11272	11272		15.921	0	1	12308000			40891	9396	27253	27265	46572	46572					0.12459876308253115
PGRARLLARAS	11	Unmodified	_PGRARLLARAS_					0	0	0		ENST00000472523.1_1_3:147111545-147225741:+|nuORF	ENST00000472523.1_1_3:147111545-147225741:+|nuORF	ENST00000472523.1_1_3:147111545-147225741:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.356689453125	2	584.357088	1166.69962	2.1397	0.0012504	-4.0245	-0.0023517	-1.8848	-0.0011014	584.3547865712267	92.649	3.0655	92.585	91.199	94.264	-0.064148					195	72	3	0	0	0	0.732	1	9776	9776		26.063	0.61321	1	743110			40892	12264	27254	27266	46573	46573					0.122941253683166
PGRAWGRQRLL	11	Unmodified	_PGRAWGRQRLL_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4;ENSG00000105559|ENST00000263265|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.25665283203125	3	437.258184	1308.75272	-1.4866	-0.00065002	-0.43267	-0.00018919	-1.9192	-0.00083921	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.74022	1	10378	10378		24.232	0	1	981430			40893	14831	27255	27267	46574	46574					0.11069503150974924
PGRAWGRQRLL	11	Unmodified	_PGRAWGRQRLL_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4;ENSG00000105559|ENST00000263265|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.25689697265625	3	437.258184	1308.75272	0.72446	0.00031677	-2.6305	-0.0011502	-1.9061	-0.00083345	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.67762	1	10263	10263		35.178	7.5343	1	670840			40894	14831	27255	27267	46575	46575					0.11069503150974924
PGRDIHIKHL	10	Unmodified	_PGRDIHIKHL_					0	0	0			REV__ENSG00000168575|ENST00000520262|SLC20A2	REV__ENSG00000168575|ENST00000520262|SLC20A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	593.3447875976562	2	593.346189	1184.67783	-0.22642	-0.00013434	-2.3776	-0.0014107	-2.604	-0.0015451	593.3446713104415	103.73	2.3003	103.73	103.29	105.59	0					144	55	4	0	0	0	0.86106	2	10630	10630;10659		33.922	12.236	1	1751500	+		40895	21502	27256	27268	46576;46577	46576					0.09287320619750972
PGRDIHIKHL	10	Unmodified	_PGRDIHIKHL_					0	0	0			REV__ENSG00000168575|ENST00000520262|SLC20A2	REV__ENSG00000168575|ENST00000520262|SLC20A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.3427124023438	2	593.346189	1184.67783	-0.64573	-0.00038314	-2.3039	-0.001367	-2.9496	-0.0017502	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.86621	1	11307	11307		26.063	2.5407	1	2296600	+		40896	21502	27256	27268	46578	46578					0.09287320619750972
PGRDIHIKHL	10	Unmodified	_PGRDIHIKHL_					0	0	0			REV__ENSG00000168575|ENST00000520262|SLC20A2	REV__ENSG00000168575|ENST00000520262|SLC20A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.3435668945312	2	593.346189	1184.67783	0.88436	0.00052473	-3.8719	-0.0022974	-2.9875	-0.0017726	593.343785503265	103.21	2.4131	103.4	103.04	105.46	0.18297					159	60	4	0	0	0	0.86409	1	11000	11000		25.126	0.6068	1	4232500	+		40897	21502	27256	27268	46579	46579					0.09287320619750972
PGRDPRATIQ	10	Unmodified	_PGRDPRATIQ_					0	0	0		nc|ENSG00000185008|Q9HCK4|ROBO2;nc|ENSG00000185008|Q9HCK4-3|ROBO2;nc|ENSG00000185008|Q9HCK4-2|ROBO2;ENSG00000185008|ENST00000696593|ROBO2	nc|ENSG00000185008|Q9HCK4|ROBO2	nc|ENSG00000185008|Q9HCK4|ROBO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.8056640625	2	555.804354	1109.59415	-0.42033	-0.00023362	3.7289	0.0020725	3.3085	0.0018389	555.8063865740231	59.517	0.80318	59.518	59.103	59.906	0.00051498					49	24	3	0	0	0	0.51401	1	5123	5123		54.722	5.2808	1	172100			40898	15148	27257	27269	46580	46580					0.043741644520423506
PGREGVGK	8	Unmodified	_PGREGVGK_					0	0	0			REV__ENST00000607001.1_1_5:72794026-72794098:-|nuORF	REV__ENST00000607001.1_1_5:72794026-72794098:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2264404296875	2	400.224677	798.434801	1.1683	0.00046758	3.5853	0.0014349	4.7536	0.0019025	400.2259734207164	34.839	1.4569	35.22	34.977	36.434	0.3812					102	37	3	0	0	0	0.87479	1	2657	2657		30.504	0	1	1604200	+		40899	29380	27258	27270	46581	46581					0.027520758947161994
PGRGIDVR	8	Unmodified	_PGRGIDVR_					0	0	0		nc|ENSG00000155275|Q8IYL2-2|TRMT44;ENST00000532477.1_1_4:8456189-8477725:+|nuORF;ENSG00000155275|ENST00000389737|TRMT44	nc|ENSG00000155275|Q8IYL2-2|TRMT44	nc|ENSG00000155275|Q8IYL2-2|TRMT44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2516784667969	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87479	1	7338	7338		30.504	1.3541	1	2494100			40900	5319	27259	27271	46582	46582					0.04839453677379879
PGRGRPAP	8	Unmodified	_PGRGRPAP_					0	0	0			REV__ENST00000262428.4_1_16:84600338-84600413:-|nuORF	REV__ENST00000262428.4_1_16:84600338-84600413:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.23248291015625	2	404.232836	806.45112	2.8761	0.0011626	-2.4963	-0.0010091	0.37984	0.00015354	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.81548	2	8652	8652;8664		28.254	0	1	4761400	+		40901	24420	27260	27272	46583;46584	46583					0.04015201851461825
PGRLAAAR	8	Unmodified	_PGRLAAAR_					0	0	0			REV__nc|ENSG00000152620|Q4G0N4-2|NADK2	REV__nc|ENSG00000152620|Q4G0N4-2|NADK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2481994628906	2	406.248486	810.48242	3.1468	0.0012784	-2.3396	-0.00095045	0.80725	0.00032794	406.2474300116592	115.25	0.26062	115.25	115.15	115.41	-0.0021133					16	12	2	0	0	0	0.81548	1	13882	13882		20.482	0	1	46673	+		40902	20309	27261	27273	46585	46585					0.06959774885547176
PGRLAAAR	8	Unmodified	_PGRLAAAR_					0	0	0			REV__nc|ENSG00000152620|Q4G0N4-2|NADK2	REV__nc|ENSG00000152620|Q4G0N4-2|NADK2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	406.248486	810.48242	0.73384	0.00029812	1.1068	0.00044962	1.8406	0.00074774	406.2489247322984	114.86	0.077156	114.92	114.89	114.97	0.061073	-0.16188	0.0026302	NaN	20.482	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	825620	+		40903	20309	27261	27273							0.06959774885547176
PGRLQLTRLPT	11	Unmodified	_PGRLQLTRLPT_					0	0	0			REV__ENST00000519917.5_1_16:67197723-67198048:+|nuORF	REV__ENST00000519917.5_1_16:67197723-67198048:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92242431640625	3	417.922578	1250.7459	-1.8945	-0.00079175	1.1534	0.00048205	-0.74105	-0.0003097	417.92301973502657	105.61	2.7753	105.68	104.89	107.66	0.073112					226	67	4	0	0	0	0.75921	1	11249	11249		12.957	0.52465	1	18308000	+		40904	24353	27262	27274	46586	46586					0.1305614547973164
PGRLRRRRRVR	11	Unmodified	_PGRLRRRRRVR_					0	0	0			REV__ENST00000436427.1_3_1:43148660-43161876:+|nuORF	REV__ENST00000436427.1_3_1:43148660-43161876:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.6539001464844	3	493.322292	1476.94505	-1.6394	-0.00080874	0.19109	9.427E-05	-1.4483	-0.00071447	493.32236497558085	42.165	1.1115	42.165	41.85	42.961	0					41	27	2	0	0	0	0.8398	1	2973	2973		6.6596	0.33873	1	115990	+		40905	26691	27263	27275	46587	46587					0.22565263341653008
PGRLTQDLKLI	11	Unmodified	_PGRLTQDLKLI_					0	0	0		ENSG00000138622|ENST00000261917|HCN4	ENSG00000138622|ENST00000261917|HCN4	ENSG00000138622|ENST00000261917|HCN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3833618164062	2	627.382437	1252.75032	-0.21917	-0.0001375	0.84427	0.00052968	0.6251	0.00039218	627.3827536710313	113.14	0.55793	113.07	112.73	113.28	-0.067215					52	23	3	0	0	0	0.75164	1	12262	12262		21.686	2.5822	1	140420			40906	4309	27264	27276	46588	46588					0.1340560990265658
PGRRLRNRLTT	11	Unmodified	_PGRRLRNRLTT_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-4|MYH14	REV__nc|ENSG00000105357|Q7Z406-4|MYH14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.2735290527344	3	447.272493	1338.79565	0.74994	0.00033543	0.056335	2.5197E-05	0.80627	0.00036062	447.27246467576646	106.88	1.1653	106.97	106.51	107.68	0.091255					134	27	6	0	0	0	0.74771	1	11543	11543		22.562	0	1	19906000	+		40907	17528	27265	27277	46589	46589					0.13980273208380822
PGRRLVLTLQV	11	Unmodified	_PGRRLVLTLQV_					0	0	0		ENSG00000184956|ENST00000421673|MUC6	ENSG00000184956|ENST00000421673|MUC6	ENSG00000184956|ENST00000421673|MUC6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.8923950195312	2	626.398422	1250.78229	-0.05181	-3.2454E-05	-1.5752	-0.00098668	-1.627	-0.0010191	626.8984225202512	108.24	0.15005	108.24	108.14	108.29	0					9	5	3	0	0	0	0.68532	1	11278	11278		33.922	1.1092	1	488180			40908	7658	27266	27278	46590	46590					0.16693022376443878
PGRRPAGP	8	Unmodified	_PGRRPAGP_					0	0	0		ENSG00000101850|ENST00000467482|GPR143	ENSG00000101850|ENST00000467482|GPR143	ENSG00000101850|ENST00000467482|GPR143	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2318115234375	2	404.232836	806.45112	2.8761	0.0011626	-2.4963	-0.0010091	0.37984	0.00015354	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.80963	1	8544	8544		15.636	0	1	4761400			40909	1965	27267	27279	46591	46591					0.04015201851461825
PGRRRAKSRGE	11	Unmodified	_PGRRRAKSRGE_					0	0	0			REV__ENSG00000198858|ENST00000361574|R3HDM4	REV__ENSG00000198858|ENST00000361574|R3HDM4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3770751953125	2	635.365976	1268.7174	2.1906	0.0013918	0.84522	0.00053702	3.0358	0.0019289	635.364421784994	111.58	0.14281	111.62	111.55	111.69	0.04184					5	3	2	0	0	0	0.1731	1	13499	13499		35.152	3.6222	1	260560	+		40910	23400	27268	27280	46592	46592					0.09378840623139695
PGRRRRLRLLW	11	Unmodified	_PGRRRRLRLLW_					0	0	0		ENST00000381340.7_1_12:26985723-26986077:-|nuORF	ENST00000381340.7_1_12:26985723-26986077:-|nuORF	ENST00000381340.7_1_12:26985723-26986077:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.98480224609375	3	493.647894	1477.92185	-0.13988	-6.9052E-05	4.0395	0.0019941	3.8996	0.001925	493.64993788378774	45.757	1.7209	45.688	45.192	46.913	-0.068634					91	46	3	0	0	0	0.80593	1	3358	3358		10.104	0.8921	1	212310			40911	10953	27269	27281	46593	46593					0.2020082450433165
PGRRSVGL	8	Unmodified	_PGRRSVGL_					0	0	0		ENSG00000110435|ENST00000227868|PDHX;nc|ENSG00000110435|O00330-2|PDHX	ENSG00000110435|ENST00000227868|PDHX	ENSG00000110435|ENST00000227868|PDHX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.25384521484375	2	421.253769	840.492984	2.7224	0.0011468	-2.0799	-0.00087617	0.6425	0.00027065	421.25268060933485	84.188	1.829	84.247	83.761	85.59	0.059258					100	41	4	0	0	0	0.85277	1	8545	8545		25.45	0	1	871350			40912	2530	27270	27282	46594	46594					0.06635757539982023
PGRRVLGG	8	Unmodified	_PGRRVLGG_					0	0	0			REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24786376953125	2	406.248486	810.48242	-1.1354	-0.00046124	1.7834	0.0007245	0.64802	0.00026326	406.24912053143106	91.114	2.1144	91.114	90.563	92.677	0					101	49	3	0	0	0	0.82464	1	8914	8914		21.702	1.2205	1	849560	+		40913	26856	27271	27283	46595	46595					0.06959774885569914
PGRRVLGG	8	Unmodified	_PGRRVLGG_					0	0	0			REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24871826171875	2	406.248486	810.48242	-0.96192	-0.00039078	1.5234	0.00061886	0.56144	0.00022808	406.24902234521767	111.59	0.90381	111.59	111.1	112	0					62	31	3	0	0	0	0.82464	1	11606	11606		21.702	0	1	63667	+		40914	26856	27271	27283	46596	46596					0.06959774885569914
PGRRVLGG	8	Unmodified	_PGRRVLGG_					0	0	0			REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2485046386719	2	406.248486	810.48242	-0.18598	-7.5555E-05	0.75193	0.00030547	0.56595	0.00022992	406.2487203598378	111.64	0.79961	111.58	111.26	112.06	-0.059937					46	25	2	0	0	0	0.81724	1	12163	12163		14.664	0	1	69533	+		40915	26856	27271	27283	46597	46597					0.06959774885569914
PGRRVLGG	8	Unmodified	_PGRRVLGG_					0	0	0			REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2480773925781	2	406.248486	810.48242	1.4359	0.00058334	-0.62428	-0.00025361	0.81164	0.00032973	406.24811193904833	90.886	2.3214	90.819	90.264	92.586	-0.067085					123	55	4	0	0	0	0.81724	1	9506	9506		14.664	0	1	1147600	+		40916	26856	27271	27283	46598	46598					0.06959774885569914
PGRRVLGG	8	Unmodified	_PGRRVLGG_					0	0	0			REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2481689453125	2	406.248486	810.48242	3.1805	0.0012921	-2.5321	-0.0010287	0.64845	0.00026343	406.2473596194762	111.52	0.96954	111.55	111.15	112.12	0.030388					88	37	3	0	0	0	0.80963	4	12240	12198;12229;12240;12245		28.254	7.7724	1	158570	+		40917	26856	27271	27283	46599;46600;46601;46602	46601					0.06959774885569914
PGRRVLGG	8	Unmodified	_PGRRVLGG_					0	0	0			REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	REV__ENST00000449660.5_1_1:2482824-2482977:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2481994628906	2	406.248486	810.48242	-1.8141	-0.00073698	2.0083	0.00081588	0.1942	7.8892E-05	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.82464	1	8935	8935		21.702	2.3424	1	42617000	+		40918	26856	27271	27283	46603	46603					0.06959774885569914
PGRSGGPPC	9	Unmodified	_PGRSGGPPC_					0	0	0			REV__ENST00000345136.7_2_8:144989462-144989657:-|nuORF	REV__ENST00000345136.7_2_8:144989462-144989657:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2379455566406	2	414.195062	826.375571	0.057707	2.3902E-05	-1.8641	-0.0007721	-1.8064	-0.00074819	414.1940355614529	78.987	0.60716	78.934	78.592	79.2	-0.053558					20	15	2	0	0	0	0.20789	1	7854	7854		12.207	0	1	100910	+		40919	25314	27272	27284	46604	46604					-0.044561433911326276
PGSASGPAVLY	11	Unmodified	_PGSASGPAVLY_					0	0	0			REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.76348876953125	2	509.763832	1017.51311	0.11756	5.9929E-05	-0.80509	-0.00041041	-0.68753	-0.00035048	509.76323659133084	49.029	0.79582	49.023	48.693	49.489	-0.0056419					37	17	3	0	0	0	0.43408	1	4091	4091		56.721	1.2168	1	403370	+		40920	21422	27273	27285	46605	46605					0.005054636892964481
PGSASGPAVLY	11	Unmodified	_PGSASGPAVLY_					0	0	0			REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	509.763832	1017.51311	0.11756	5.9929E-05	-0.80509	-0.00041041	-0.68753	-0.00035048	509.76323659133084	49.029	0.79582	49.023	48.693	49.489	-0.0056419	0.020614	-0.00034639	NaN	56.721	37	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	403370	+		40921	21422	27273	27285							0.005054636892964481
PGSASGPAVLY	11	Unmodified	_PGSASGPAVLY_					0	0	0			REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	509.763832	1017.51311	-0.4458	-0.00022725	-0.20782	-0.00010594	-0.65361	-0.00033319	509.76378277888307	49.023	0.65126	49.048	48.76	49.411	0.025574	0.045569	0.00026255	NaN	56.721	36	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	218730	+		40922	21422	27273	27285							0.005054636892964481
PGSASGPAVLY	11	Unmodified	_PGSASGPAVLY_					0	0	0			REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	509.763832	1017.51311	0.3458	0.00017628	-1.1356	-0.00057888	-0.78978	-0.0004026	509.7631570827484	49.052	0.63828	49.09	48.793	49.431	0.037735	0.087234	-0.00068333	NaN	56.721	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	216090	+		40923	21422	27273	27285							0.005054636892964481
PGSASGPAVLY	11	Unmodified	_PGSASGPAVLY_					0	0	0			REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	509.763832	1017.51311	-0.1979	-0.00010088	-0.28233	-0.00014392	-0.48023	-0.0002448	509.76348670348574	48.973	0.59103	48.879	48.639	49.23	-0.093182	-0.12312	0.00018657	NaN	56.721	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112980	+		40924	21422	27273	27285							0.005054636892964481
PGSCELCD	8	Unmodified	_PGSCELCD_					0	0	0			REV__nc|ENSG00000099139|Q92824|PCSK5	REV__nc|ENSG00000099139|Q92824|PCSK5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.17578125	2	412.151671	822.28879	0.67974	0.00028015	0.26142	0.00010774	0.94115	0.0003879	412.1509254415273	94.788	0.3706	94.951	94.701	95.071	0.16308					13	8	2	0	0	0	0.4196	1	9710	9710		12.959	0	1	59785	+		40925	17083	27274	27286	46606	46606					-0.12946310727863874
PGSEPPAR	8	Unmodified	_PGSEPPAR_					0	0	0		nc|ENSG00000196364|A6NIE9|PRSS29P	nc|ENSG00000196364|A6NIE9|PRSS29P	nc|ENSG00000196364|A6NIE9|PRSS29P	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2483215332031	2	405.70886	809.403166	0.63122	0.00025609	-1.5309	-0.00062111	-0.89971	-0.00036502	405.7079599544481	89.353	0.60429	89.505	89.225	89.829	0.1519					17	13	2	0	0	0	0.4196	1	8883	8883		24.203	17.89	1	91685			40926	15181	27275	27287	46607	46607					-0.009159168592532296
PGSPEKLH	8	Unmodified	_PGSPEKLH_					0	0	0			REV__ENSG00000135521|ENST00000367576|LTV1	REV__ENSG00000135521|ENST00000367576|LTV1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.19097900390625	2	432.732335	863.450116	1.5602	0.00067516	-2.4378	-0.0010549	-0.87758	-0.00037976	432.73116352385694	100.8	0.64357	101.1	100.73	101.37	0.2999					27	15	2	0	0	0	0.4196	1	12242	12242		42.396	11.892	1	171220	+		40927	19233	27276	27288	46608	46608					0.01292942691884491
PGSSQTNGP	9	Unmodified	_PGSSQTNGP_					0	0	0			REV__ENST00000442856.1_1_16:79338-84879:-|nuORF	REV__ENST00000442856.1_1_16:79338-84879:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.3001403808594	2	422.693407	843.37226	-0.89172	-0.00037692	-0.20902	-8.8351E-05	-1.1007	-0.00046527	422.6923059294897	87.95	0.65132	88.413	88.06	88.711	0.46312					26	15	2	0	0	0	0.20789	1	10386	10386		20.947	0	1	176370	+		40928	18580	27277	27289	46609	46609					-0.05569114964134769
PGSTFCAN	8	Carbamidomethyl (C)	_PGSTFC(Carbamidomethyl (C))AN_	PGSTFC(1)AN		PGSTFC(46)AN		0	1	0		ENST00000589179.5_1_12:53590773-53591061:-|nuORF	ENST00000589179.5_1_12:53590773-53591061:-|nuORF	ENST00000589179.5_1_12:53590773-53591061:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.1806335449219	2	427.179078	852.343602	1.669	0.00071296	1.4701	0.00062798	3.1391	0.0013409	427.17981845763165	98.554	1.2388	98.915	98.399	99.638	0.36136					61	30	3	0	0	0	0.91977	1	11870	11870		45.952	7.1458	1	1133500			40929	14230	27278	27290	46610	46610	189				-0.0884755586492929
PGSVLTRAA	9	Unmodified	_PGSVLTRAA_					0	0	0			REV__ENST00000591806.5_1_19:1377879-1378284:+|nuORF	REV__ENST00000591806.5_1_19:1377879-1378284:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.25494384765625	2	436.253434	870.492316	-0.9617	-0.00041954	3.944	0.0017206	2.9823	0.001301	436.25498173956515	108.06	0.25016	108.06	107.98	108.23	0					16	9	2	0	0	0	0.7932	1	11263	11263		24.203	2.2429	1	1512600	+		40930	29203	27279	27291	46611	46611					0.05188918100270712
PGSVLTRAA	9	Unmodified	_PGSVLTRAA_					0	0	0			REV__ENST00000591806.5_1_19:1377879-1378284:+|nuORF	REV__ENST00000591806.5_1_19:1377879-1378284:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	436.253434	870.492316	-0.9617	-0.00041954	3.944	0.0017206	2.9823	0.001301	436.25498173956515	108.06	0.25016	108.06	107.98	108.23	0	-0.018639	0.0003326	NaN	24.203	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1512600	+		40931	29203	27279	27291							0.05188918100270712
PGSVLTRAA	9	Unmodified	_PGSVLTRAA_					0	0	0			REV__ENST00000591806.5_1_19:1377879-1378284:+|nuORF	REV__ENST00000591806.5_1_19:1377879-1378284:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	436.253434	870.492316	-0.16262	-7.0945E-05	3.1445	0.0013718	2.9818	0.0013008	436.2546019771933	108.14	0.28646	108.09	108.03	108.32	-0.042412	0.018639	-0.000365	NaN	24.203	12	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1357600	+		40932	29203	27279	27291							0.05188918100270712
PGTAKKHKGGI	11	Unmodified	_PGTAKKHKGGI_					0	0	0		nc|ENSG00000157617|Q9Y426-2|C2CD2;nc|ENSG00000157617|Q9Y426-3|C2CD2;ENSG00000157617|ENST00000380486|C2CD2	nc|ENSG00000157617|Q9Y426-2|C2CD2	nc|ENSG00000157617|Q9Y426-2|C2CD2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3359375	2	547.327465	1092.64038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.04	1	116.97	116.47	117.47	-0.064972								0	0	0	0.56276	1	14005	14005		20.947	7.1716	1				40933	5442	27280	27292	46612	46612					0.09776229354133648
PGTASAPPGT	10	Unmodified	_PGTASAPPGT_					0	0	0		ENST00000465160.2_1_9:140286885-140287641:-|nuORF	ENST00000465160.2_1_9:140286885-140287641:-|nuORF	ENST00000465160.2_1_9:140286885-140287641:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2617492675781	2	428.213975	854.413397	-1.1362	-0.00048653	-2.8346	-0.0012138	-3.9708	-0.0017003	428.21300548766976	91.165	0.19972	91.165	91.065	91.265	0					5	4	2	0	0	0	0.37624	1	8904	8904		42.396	1.618	1	36527			40934	12104	27281	27293	46613	46613					-0.01963353924668354
PGTGESYT	8	Unmodified	_PGTGESYT_					0	0	0		ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.1758117675781	2	406.177058	810.339563	0.30537	0.00012404	-2.6747	-0.0010864	-2.3693	-0.00096235	406.17587455493447	95.496	1.4528	95.915	95.061	96.514	0.41964					68	35	2	0	0	0	0.89962	1	11475	11475		38.806	0	1	1268100			40935	8508	27282	27294	46614	46614					-0.07319322087005276
PGTGKHGTG	9	Unmodified	_PGTGKHGTG_					0	0	0			REV__ENST00000268154.8_1_15:90623102-90623426:+|nuORF	REV__ENST00000268154.8_1_15:90623102-90623426:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2485046386719	2	406.206484	810.398415	0.62197	0.00025265	-4.3662	-0.0017736	-3.7443	-0.0015209	406.20410949383114	88.433	0.47934	88.583	88.242	88.721	0.15055					18	11	2	0	0	0	0.20789	1	8773	8773		40.778	23.413	1	81057	+		40936	24511	27283	27295	46615	46615					-0.014368010020120892
PGTIGKPH	8	Unmodified	_PGTIGKPH_					0	0	0		L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|20|1|sense	L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|20|1|sense	L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|20|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.73089599609375	2	403.729595	805.444637	2.7323	0.0011031	-0.40392	-0.00016307	2.3284	0.00094003	403.72925673314853	99.693	1.4907	100.03	99.108	100.6	0.33294					77	37	3	0	0	0	0.8347	1	12019	12019		23.042	4.7181	1	609450			40937	14683	27284	27296	46616	46616					0.034132639000858944
PGTMDSVH	8	Unmodified	_PGTMDSVH_					0	0	0		ENSG00000173213|ENST00000308911|TUBB8B	ENSG00000173213|ENST00000308911|TUBB8B	ENSG00000173213|ENST00000308911|TUBB8B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1884765625	2	422.186903	842.359253	2.6651	0.0011252	0.26686	0.00011267	2.932	0.0012378	422.1875352500893	101.42	0.78451	101.74	101.5	102.29	0.3251					49	21	3	0	0	0	0.9159	1	12326	12326		44.531	0	1	3340500			40938	6840	27285	27297	46617	46617					-0.06823269347876249
PGTSAASCN	9	Unmodified	_PGTSAASCN_					0	0	0			REV__ENST00000361813.5_1_1:156246878-156247780:-|nuORF	REV__ENST00000361813.5_1_1:156246878-156247780:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.17083740234375	2	404.16871	806.322867	-0.18774	-7.5878E-05	3.363	0.0013592	3.1752	0.0012833	404.170229386983	78.542	2.4005	78.598	78.112	80.513	0.056114					177	77	5	0	0	0	0.7932	1	7731	7731		26.693	4.733	1	6189200	+		40939	25515	27286	27298	46618	46618					-0.08804146244597177
PGTSRRLSA	9	Unmodified	_PGTSRRLSA_					0	0	0		ENSG00000118162|ENST00000338134|KPTN	ENSG00000118162|ENST00000338134|KPTN	ENSG00000118162|ENST00000338134|KPTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.766845703125	2	472.76724	943.519927	-1.568	-0.00074129	1.5546	0.00073498	-0.013349	-6.3108E-06	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.73802	1	8089	8089		37.812	0.65241	1	404330			40940	3014	27287	27299	46619	46619					0.04590821360523023
PGTTVDSY	8	Unmodified	_PGTTVDSY_					0	0	0		ENSG00000166341|ENST00000299441|DCHS1	ENSG00000166341|ENST00000299441|DCHS1	ENSG00000166341|ENST00000299441|DCHS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1915588378906	2	420.192708	838.370863	-0.017504	-7.3551E-06	-3.0933	-0.0012998	-3.1109	-0.0013072	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.884	1	11069	11069		33.516	0	1	4147200			40941	6180	27288	27300	46620	46620					-0.05478749052906551
PGVKSRGVSA	10	Unmodified	_PGVKSRGVSA_					0	0	0		ENST00000396987.7_1_8:41480416-41480683:+|nuORF	ENST00000396987.7_1_8:41480416-41480683:+|nuORF	ENST00000396987.7_1_8:41480416-41480683:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.277587890625	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.86763	1	7968	7968		26.693	1.2427	1	1802300			40942	11131	27289	27301	46621	46621					0.060319920203255606
PGVLGRRG	8	Unmodified	_PGVLGRRG_					0	0	0		ENST00000540583.5_1_12:12878851-12879297:+|nuORF	ENST00000540583.5_1_12:12878851-12879297:+|nuORF	ENST00000540583.5_1_12:12878851-12879297:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24853515625	2	406.248486	810.48242	-0.96192	-0.00039078	1.5234	0.00061886	0.56144	0.00022808	406.24902234521767	111.59	0.90381	111.59	111.1	112	0					62	31	3	0	0	0	0.82464	1	11616	11616		21.702	1.2205	1	63667			40943	13499	27290	27302	46622	46622					0.06959774885558545
PGVLLSALI	9	Unmodified	_PGVLLSALI_					0	0	0			REV__ENST00000473458.5_1_22:25240737-25320238:+|nuORF;REV__nc|ENSG00000141258|O43147-5|SGSM2	REV__ENST00000473458.5_1_22:25240737-25320238:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7870788574219	2	441.786579	881.558604	-1.2332	-0.00054481	3.5907	0.0015863	2.3575	0.0010415	441.7880163081002	41.793	3.3981	41.755	40.553	43.951	-0.038223					227	85	5	0	0	0	0.7932	1	3028	3028		8.8223	0	1	13573000	+		40944	21348;29894	27291	27303	46623	46623					0.11308733942325944
PGVLPRFIQ	9	Unmodified	_PGVLPRFIQ_					0	0	0		ENST00000570267.2_1_16:89283339-89283555:-|nuORF	ENST00000570267.2_1_16:89283339-89283555:-|nuORF	ENST00000570267.2_1_16:89283339-89283555:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.808349609375	2	513.808377	1025.6022	-0.30203	-0.00015519	1.5478	0.00079525	1.2457	0.00064007	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.7932	1	4127	4127		18.324	0	1	861580			40945	13994	27292	27304	46624	46624					0.09042343439477918
PGVSICSY	8	Unmodified	_PGVSICSY_					0	0	0		ENST00000284202.8_1_18:22031333-22031390:+|nuORF	ENST00000284202.8_1_18:22031333-22031390:+|nuORF	ENST00000284202.8_1_18:22031333-22031390:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1935119628906	2	413.194196	824.37384	0.80605	0.00033306	-2.5244	-0.0010431	-1.7183	-0.00071	413.1932379055747	78.047	2.9824	78.452	77.977	80.959	0.4053					181	70	5	0	0	0	0.86288	2	8992	8979;8992		28.254	2.8041	1	5554900			40946	9644	27293	27305	46625;46626	46626					-0.0453719719973833
PGVSMESH	8	Unmodified	_PGVSMESH_					0	0	0			REV__ENST00000597572.1_1_19:17321325-17322591:+|nuORF	REV__ENST00000597572.1_1_19:17321325-17322591:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.18841552734375	2	422.186903	842.359253	2.6651	0.0011252	0.26686	0.00011267	2.932	0.0012378	422.1875352500893	101.42	0.78451	101.74	101.5	102.29	0.3251					49	21	3	0	0	0	0.9159	1	12344	12344		44.531	0	1	3340500	+		40947	29268	27294	27306	46627	46627					-0.06823269347876249
PGVTLPEL	8	Unmodified	_PGVTLPEL_					0	0	0			REV__ENSG00000278311|ENST00000613102|GGNBP2	REV__ENSG00000278311|ENST00000613102|GGNBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.23675537109375	2	413.239461	824.46437	-1.5467	-0.00063915	0.5911	0.00024426	-0.95558	-0.00039489	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.88915	1	6999	6999		35.201	1.6851	1	1341700	+		40948	24034	27295	27307	46628	46628					0.04511595120175116
PGYEKVPGEK	10	Unmodified	_PGYEKVPGEK_					0	0	0		ENSG00000120708|ENST00000442011|TGFBI;ENST00000504185.5_1_5:135364744-135380547:+|nuORF	ENSG00000120708|ENST00000442011|TGFBI	ENSG00000120708|ENST00000442011|TGFBI	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.2905883789062	2	552.290214	1102.56587	-1.436	-0.00079308	1.0801	0.00059651	-0.35592	-0.00019657	552.2908060202125	58.606	0.66695	58.998	58.609	59.276	0.39209					37	15	3	0	0	0	0.26675	1	6146	6146		76.17	4.2922	1	707510			40949	3147	27296	27308	46629	46629					0.018694217520987877
PGYEKVPGEK	10	Unmodified	_PGYEKVPGEK_					0	0	0		ENSG00000120708|ENST00000442011|TGFBI;ENST00000504185.5_1_5:135364744-135380547:+|nuORF	ENSG00000120708|ENST00000442011|TGFBI	ENSG00000120708|ENST00000442011|TGFBI	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.2916259765625	2	552.290214	1102.56587	-0.069305	-3.8277E-05	0.14044	7.7565E-05	0.071138	3.9289E-05	552.2899741579092	58.445	0.81897	58.998	58.679	59.498	0.55323					35	19	3	0	0	0	0.42897	1	6152	6152		61.691	3.445	1	754610			40950	3147	27296	27308	46630	46630					0.018694217520987877
PGYSHPGH	8	Unmodified	_PGYSHPGH_					0	0	0		ENST00000595585.1_1_19:51452094-51455913:-|nuORF;ENSG00000167754|ENST00000336334|KLK5	ENST00000595585.1_1_19:51452094-51455913:-|nuORF	ENST00000595585.1_1_19:51452094-51455913:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.1914367675781	2	426.193377	850.372201	-0.81474	-0.00034724	-4.1663	-0.0017757	-4.9811	-0.0021229	426.1917333456714	91.33	1.6507	91.801	91.36	93.011	0.47068					112	38	5	0	0	0	0.92176	1	10876	10876		46.766	0	1	3110500			40951	6327	27297	27309	46631	46631					-0.05897070173477914
PHAADTTCAP	10	Unmodified	_PHAADTTCAP_					0	0	0			REV__ENSG00000163295|ENST00000295463|ALPI	REV__ENSG00000163295|ENST00000295463|ALPI	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.2125549316406	2	492.216192	982.41783	-3.0973	-0.0015245	0.43498	0.0002141	-2.6623	-0.0013104	492.216677548791	37.535	0.39254	37.546	37.42	37.812	0.011173					10	8	2	0	0	0	0.86305	1	2511	2511		31.955	0	1	44619	+		40952	20895	27298	27310	46632	46632					-0.07408212773430023
PHACLKDNG	9	Unmodified	_PHACLKDNG_					0	0	0		ENSG00000143297|ENST00000361835|FCRL5;nc|ENSG00000143297|Q96RD9-3|FCRL5;nc|ENSG00000143297|Q96RD9-4|FCRL5;ENST00000481082.1_1_1:157512505-157514867:-|nuORF	ENSG00000143297|ENST00000361835|FCRL5;ENST00000481082.1_1_1:157512505-157514867:-|nuORF	ENSG00000143297|ENST00000361835|FCRL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.728271484375	2	477.726726	953.4389	0.36854	0.00017606	3.0976	0.0014798	3.4661	0.0016559	477.7283055731362	97.887	2.0378	98.264	97.227	99.265	0.37679					128	49	5	0	0	0	0.75725	1	11884	11884		36.447	0.82846	1	10499000			40953	4614;12452	27299	27311	46633	46633					-0.039682026738887544
PHAGARGPLPA	11	Unmodified	_PHAGARGPLPA_					0	0	0			REV__ENST00000373109.6_1_10:73822865-73826676:-|nuORF	REV__ENST00000373109.6_1_10:73822865-73826676:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	522.2890625	2	522.290882	1042.56721	-0.82154	-0.00042908	-0.36978	-0.00019313	-1.1913	-0.00062222	522.2904861090643	36.723	0.80389	36.735	36.391	37.195	0.011173					35	17	3	0	0	0	0.50804	1	2385	2385		51.335	8.9393	1	201110	+		40954	25747	27300	27312	46634	46634					0.04763100631521411
PHAIAPPP	8	Unmodified	_PHAIAPPP_					0	0	0			REV__nc|ENSG00000105176|O94763-2|URI1	REV__nc|ENSG00000105176|O94763-2|URI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.22869873046875	2	400.226688	798.438824	-0.14076	-5.6335E-05	4.0679	0.0016281	3.9271	0.0015717	400.22859684101246	55.169	2.0847	55.161	54.01	56.095	-0.0077095					100	64	3	0	0	0	0.80127	2	4896	4896;4907		24.504	5.144	1	485630	+		40955	17511	27301	27313	46635;46636	46635					0.031541653884119114
PHAIAPPP	8	Unmodified	_PHAIAPPP_					0	0	0			REV__nc|ENSG00000105176|O94763-2|URI1	REV__nc|ENSG00000105176|O94763-2|URI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2285461425781	2	400.226688	798.438824	-0.058285	-2.3327E-05	2.876	0.0011511	2.8177	0.0011277	400.2280059844884	52.237	1.9334	52.905	52.23	54.164	0.66729					76	46	3	0	0	0	0.80127	1	5232	5232		16.705	0	1	9506900	+		40956	17511	27301	27313	46637	46637					0.031541653884119114
PHALLHIK	8	Unmodified	_PHALLHIK_					0	0	0		ENST00000594012.1_19:21992006-21992165:-|nuORF	ENST00000594012.1_19:21992006-21992165:-|nuORF	ENST00000594012.1_19:21992006-21992165:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7916259765625	2	464.789987	927.565421	0.18654	8.6704E-05	1.258	0.00058469	1.4445	0.00067139	464.79055881570685	36.192	0.5992	36.295	35.987	36.586	0.10306					29	19	2	0	0	0	0.86288	1	2003	2003		26.796	6.3143	1	111000			40957	14312	27302	27314	46638	46638					0.09874091613562541
PHALLHIK	8	Unmodified	_PHALLHIK_					0	0	0		ENST00000594012.1_19:21992006-21992165:-|nuORF	ENST00000594012.1_19:21992006-21992165:-|nuORF	ENST00000594012.1_19:21992006-21992165:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	464.789987	927.565421	0.14379	6.6831E-05	1.5448	0.00071802	1.6886	0.00078485	464.7905686795887	36.123	1.2464	36.405	35.928	37.175	0.28173	0.041975	0.00052037	NaN	26.796	64	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	531860			40958	14312	27302	27314							0.09874091613562541
PHALLHIK	8	Unmodified	_PHALLHIK_					0	0	0		ENST00000594012.1_19:21992006-21992165:-|nuORF	ENST00000594012.1_19:21992006-21992165:-|nuORF	ENST00000594012.1_19:21992006-21992165:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	464.789987	927.565421	1.2357	0.00057434	0.43818	0.00020366	1.6739	0.000778	464.79000561930917	35.947	1.1962	36.388	35.959	37.156	0.44043	0.025269	-0.00050834	NaN	26.796	66	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	543940			40959	14312	27302	27314							0.09874091613562541
PHAPIGLY	8	Unmodified	_PHAPIGLY_					0	0	0		ENSG00000276023|ENST00000617516|DUSP14	ENSG00000276023|ENST00000617516|DUSP14	ENSG00000276023|ENST00000617516|DUSP14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2232666015625	2	434.239796	866.465038	0.54094	0.0002349	-2.8006	-0.0012161	-2.2596	-0.00098122	434.2391860853388	94.886	0.78141	95.306	94.845	95.627	0.41964					28	18	3	0	0	0	0.4196	1	11313	11313		24.504	12.297	1	101660			40960	9009	27303	27315	46639	46639					0.02646434559892441
PHAPIGLY	8	Unmodified	_PHAPIGLY_					0	0	0		ENSG00000276023|ENST00000617516|DUSP14	ENSG00000276023|ENST00000617516|DUSP14	ENSG00000276023|ENST00000617516|DUSP14	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	434.239796	866.465038	-0.16708	-7.2551E-05	-0.84398	-0.00036649	-1.0111	-0.00043904	434.2388493152653	94.949	0.71651	95.017	94.673	95.389	0.068336	-0.14444	0.00080338	NaN	24.504	19	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37363			40961	9009	27303	27315							0.02646434559892441
PHAWPPLG	8	Unmodified	_PHAWPPLG_					0	0	0		ENST00000434939.1_3_2:220092748-220093392:-|nuORF	ENST00000434939.1_3_2:220092748-220093392:-|nuORF	ENST00000434939.1_3_2:220092748-220093392:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2680969238281	2	437.732138	873.449723	-1.7199	-0.00075287	2.2431	0.00098187	0.52315	0.000229	437.7352450870939	51.094	0.19986	51.094	51.02	51.219	0					6	4	2	0	0	0	0.4196	1	4124	4124		24.504	11.545	1	18796			40962	11702	27304	27316	46640	46640					0.007935677627074256
PHCLWGRPVAC	11	Unmodified	_PHCLWGRPVAC_					0	0	0			REV__ENST00000477531.3_1_3:170150402-170150480:+|nuORF	REV__ENST00000477531.3_1_3:170150402-170150480:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.801025390625	2	619.799703	1237.58485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.412	1	30.41	29.91	30.91	-0.0022526								0	0	0	0.56276	1	1338	1338		26.693	0.62953	1		+		40963	27358	27305	27317	46641	46641					-0.024436434294784704
PHEKQLYVI	9	Unmodified	_PHEKQLYVI_					0	0	0			REV__ENSG00000070269|ENST00000261556|TMEM260	REV__ENSG00000070269|ENST00000261556|TMEM260	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.815185546875	2	563.816399	1125.61824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.125	1	62.155	61.655	62.655	0.029575								0	0	0	0.28386	1	5806	5806		37.159	2.9866	1		+		40964	16599	27306	27318	46642	46642					0.060460048857066795
PHELYWRLKRH	11	Unmodified	_PHELYWRLKRH_					0	0	0		ENSG00000269113|ENST00000606738|TRABD2B	ENSG00000269113|ENST00000606738|TRABD2B	ENSG00000269113|ENST00000606738|TRABD2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.8106079101562	3	512.28451	1533.8317	1.4925	0.0007646	-3.7734	-0.0019331	-2.2809	-0.0011685	512.283208509127	28.072	0.22166	27.817	27.676	27.897	-0.25465					6	4	2	0	0	0	0.1767	1	1669	1669		9.2118	0	1	35169			40965	8967	27307	27319	46643	46643					0.0861373038524107
PHFIHILLA	9	Unmodified	_PHFIHILLA_					0	0	0		nc|ENSG00000273085|Q8NGJ3|OR52E1	nc|ENSG00000273085|Q8NGJ3|OR52E1	nc|ENSG00000273085|Q8NGJ3|OR52E1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2930297851562	2	530.818744	1059.62294	-1.5146	-0.00080399	1.7835	0.0009467	0.26884	0.00014271	531.3200195915218	91.709	0.55807	91.895	91.53	92.088	0.18581					16	12	2	0	0	0	0.20789	1	9169	9169		29.842	22.151	1	84076			40966	15312	27308	27320	46644	46644					0.09550933819150487
PHFWPKLL	8	Unmodified	_PHFWPKLL_					0	0	0		ENSG00000126351|ENST00000450525|THRA;chr17:40069007-40074192|43|16.16|0.94|4.1|+|ENST00000546243|THRA,THRA;nc|ENSG00000126351|P10827-4|THRA;nc|ENSG00000126351|P10827-3|THRA;nc|ENSG00000126351|P10827|THRA	ENSG00000126351|ENST00000450525|THRA	ENSG00000126351|ENST00000450525|THRA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8184814453125	2	519.300188	1036.58582	0.090209	4.6845E-05	-2.4184	-0.0012559	-2.3282	-0.0012091	519.2986176627415	82.76	0.53879	83.233	82.878	83.416	0.47383					17	12	2	0	0	0	0.4196	1	9566	9566		28.254	16.743	1	168420			40967	225	27309	27321	46645	46645					0.06899262273373097
PHGKMFNEQTW	11	Unmodified	_PHGKMFNEQTW_					0	0	0		ENSG00000137185|ENST00000252207|ZSCAN9;nc|ENSG00000137185|O15535-2|ZSCAN9	ENSG00000137185|ENST00000252207|ZSCAN9	ENSG00000137185|ENST00000252207|ZSCAN9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.8800048828125	3	458.880162	1373.61866	0.16817	7.717E-05	-1.046	-0.00047998	-0.8778	-0.00040281	458.87974610162627	17.249	0.45489	16.638	16.475	16.929	-0.6107					31	9	5	0	0	0	0.6593	1	245	245		37.6	4.5605	1	716260			40968	4177	27310	27322	46646	46646					-0.05320943456763416
PHGLLGPGPI	10	Unmodified	_PHGLLGPGPI_					0	0	0		ENSG00000204569|ENST00000376511|PPP1R10	ENSG00000204569|ENST00000376511|PPP1R10	ENSG00000204569|ENST00000376511|PPP1R10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2781066894531	2	479.279452	956.544351	-0.81003	-0.00038823	-2.4891	-0.001193	-3.2991	-0.0015812	479.2781277040713	97.238	1.2623	97.469	96.955	98.217	0.23103					74	29	3	0	0	0	0.70264	1	10057	10057		44.531	7.372	1	700460			40969	8460	27311	27323	46647	46647					0.0643408151404401
PHGPGLMI	8	Unmodified	_PHGPGLMI_					0	0	0			REV__ENST00000372242.7_1_1:45101583-45102057:-|nuORF	REV__ENST00000372242.7_1_1:45101583-45102057:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	411.21624755859375	2	411.220549	820.426544	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.305	1	87.372	86.872	87.872	0.067711								0	0	0	0.2945	1	8827	8827		33.493	8.989	1		+		40970	25711	27312	27324	46648	46648					0.009148056537242155
PHGPGLMI	8	Unmodified	_PHGPGLMI_					0	0	0			REV__ENST00000372242.7_1_1:45101583-45102057:-|nuORF	REV__ENST00000372242.7_1_1:45101583-45102057:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	411.2186279296875	2	411.220549	820.426544	-1.817	-0.00074717	1.3709	0.00056374	-0.44607	-0.00018343	411.2205662131835	87.047	2.511	87.241	85.067	87.578	0.19379					79	58	2	0	0	0	0.88393	1	8558	8558		33.493	0	1	245210	+		40971	25711	27312	27324	46649	46649					0.009148056537242155
PHGRLRTRWT	10	Unmodified	_PHGRLRTRWT_					0	0	0		ENST00000344204.8_1_5:14406683-14419905:+|nuORF	ENST00000344204.8_1_5:14406683-14419905:+|nuORF	ENST00000344204.8_1_5:14406683-14419905:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3577270507812	2	640.360162	1278.70577	0.92817	0.00059436	-2.9779	-0.0019069	-2.0497	-0.0013125	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.51302	1	10313	10313		54.776	10.399	1	603720			40972	10289	27313	27325	46650	46650					0.07756643599850577
PHHLLLLSP	9	Unmodified	_PHHLLLLSP_					0	0	0		ENST00000376514.6_2_19:54971804-54971942:+|nuORF	ENST00000376514.6_2_19:54971804-54971942:+|nuORF	ENST00000376514.6_2_19:54971804-54971942:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3504028320312	2	513.808377	1025.6022	-0.10307	-5.2956E-05	3.1404	0.0016136	3.0373	0.0015606	513.8093919619533	55.807	0.59048	55.78	55.518	56.109	-0.027279					23	16	2	0	0	0	0.20789	1	5124	5124		33.516	16.151	1	59868			40973	10819	27314	27326	46651	46651					0.09042343439477918
PHHLLLLSP	9	Unmodified	_PHHLLLLSP_					0	0	0		ENST00000376514.6_2_19:54971804-54971942:+|nuORF	ENST00000376514.6_2_19:54971804-54971942:+|nuORF	ENST00000376514.6_2_19:54971804-54971942:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8080444335938	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.7932	1	3955	3955		26.796	2.5934	1	1550000			40974	10819	27314	27326	46652	46652					0.09042343439477918
PHHLLLLSP	9	Unmodified	_PHHLLLLSP_					0	0	0		ENST00000376514.6_2_19:54971804-54971942:+|nuORF	ENST00000376514.6_2_19:54971804-54971942:+|nuORF	ENST00000376514.6_2_19:54971804-54971942:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3189697265625	2	513.808377	1025.6022	-0.39934	-0.00020519	3.2445	0.0016671	2.8452	0.0014619	514.31180810684	55.105	0.76693	55.055	54.633	55.4	-0.049271					29	22	2	0	0	0	0.20789	1	4638	4638		25.45	5.4534	1	123980			40975	10819	27314	27326	46653	46653					0.09042343439477918
PHHLLLLSP	9	Unmodified	_PHHLLLLSP_					0	0	0		ENST00000376514.6_2_19:54971804-54971942:+|nuORF	ENST00000376514.6_2_19:54971804-54971942:+|nuORF	ENST00000376514.6_2_19:54971804-54971942:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	513.808377	1025.6022	-0.42198	-0.00021682	2.1934	0.001127	1.7714	0.00091017	513.8092731126965	55.733	0.39626	55.696	55.45	55.846	-0.036823	-0.041778	-0.00034441	NaN	25.45	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81499			40976	10819	27314	27326							0.09042343439477918
PHHLLSPL	8	Unmodified	_PHHLLSPL_					0	0	0			REV__ENST00000413817.7_2_22:50753075-50753108:-|nuORF	REV__ENST00000413817.7_2_22:50753075-50753108:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2608947753906	2	457.266345	912.518136	-1.0543	-0.00048207	-2.9646	-0.0013556	-4.0188	-0.0018377	457.264828131541	95.464	1.1692	95.464	95.008	96.177	0					62	26	3	0	0	0	0.82464	1	9539	9539		21.702	0	1	518470	+		40977	26397	27315	27327	46654	46654					0.05837812342565485
PHIHASLTL	9	Unmodified	_PHIHASLTL_					0	0	0			REV__nc|ENSG00000137747|Q9BYE2-3|TMPRSS13	REV__nc|ENSG00000137747|Q9BYE2-3|TMPRSS13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7800598144531	2	494.782359	987.550165	-1.4939	-0.00073914	-2.7072	-0.0013395	-4.2011	-0.0020786	494.78084579093485	83.794	2.8854	83.932	82.379	85.265	0.13811					127	66	3	0	0	0	0.76996	1	8215	8215		33.516	0.70317	1	242900	+		40978	19403	27316	27328	46655	46655					0.05589180025708629
PHIHQTPSP	9	Unmodified	_PHIHQTPSP_					0	0	0		ENSG00000171735|ENST00000303635|CAMTA1;nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1	ENSG00000171735|ENST00000303635|CAMTA1	ENSG00000171735|ENST00000303635|CAMTA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.7932434082031	2	507.261791	1012.50903	0.19822	0.00010055	1.8536	0.00094026	2.0518	0.0010408	507.2624275128952	32.988	0.33766	33.158	33.019	33.356	0.16971					12	7	3	0	0	0	0.20789	1	2350	2350		33.516	11.813	1	110470			40979	6703	27317	27329	46656	46656					0.0032741898623953603
PHIQPIKPIPI	11	Unmodified	_PHIQPIKPIPI_					0	0	0			REV__ENSG00000206530|ENST00000393845|CFAP44	REV__ENSG00000206530|ENST00000393845|CFAP44	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2662658691406	3	418.264053	1251.77033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.539	1	49.565	49.065	50.065	0.025574								0	0	0	0.56276	1	3839	3839		17.833	4.8757	1		+		40980	23589	27318	27330	46657	46657					0.1545140563325731
PHIVKKERGAS	11	Unmodified	_PHIVKKERGAS_					0	0	0			REV__ENST00000508652.5_1_4:164415907-164436651:+|nuORF	REV__ENST00000508652.5_1_4:164415907-164436651:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.35595703125	2	611.356754	1220.69895	2.4219	0.0014807	-3.0766	-0.0018809	-0.65465	-0.00040023	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.72106	1	10348	10348		28.081	1.3886	1	12656000	+		40981	23333	27319	27331	46658	46658					0.09743285928607293
PHKINLDLI	9	Unmodified	_PHKINLDLI_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000513447.1_1_5:54569247-54572159:-|nuORF;ENST00000504778.5_1_5:54552318-54579000:-|nuORF	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.81640625	2	531.818941	1061.62333	-0.69524	-0.00036974	-3.1977	-0.0017006	-3.8929	-0.0020703	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.76764	1	10124	10124		34.173	1.3601	1	1296000			40982	1181	27320	27332	46659	46659					0.09498308748334239
PHKKYELT	8	Unmodified	_PHKKYELT_					0	0	0		nc|ENSG00000143322|P42684-2|ABL2;nc|ENSG00000143322|P42684-6|ABL2;nc|ENSG00000143322|P42684-3|ABL2;ENSG00000143322|ENST00000502732|ABL2;nc|ENSG00000143322|P42684-4|ABL2;nc|ENSG00000143322|P42684-7|ABL2;nc|ENSG00000143322|P42684-10|ABL2;nc|ENSG00000143322|P42684-5|ABL2	nc|ENSG00000143322|P42684-2|ABL2	nc|ENSG00000143322|P42684-2|ABL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.28179931640625	2	508.282192	1014.54983	0.91246	0.00046379	-0.89223	-0.0004535	0.020236	1.0285E-05	508.2815888687233	21.314	0.84947	21.382	21.152	22.001	0.068251					67	27	3	0	0	0	0.87479	1	547	547		30.504	4.9296	1	202360			40983	4618	27321	27333	46660	46660					0.04313760305831238
PHKNKTHKN	9	Unmodified	_PHKNKTHKN_					0	0	0		ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3057861328125	2	552.307064	1102.59957	-0.59209	-0.00032702	-0.41687	-0.00023024	-1.009	-0.00055726	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.76255	1	9055	9055		35.618	2.8059	1	1102700			40984	9196	27322	27334	46661	46661					0.052378880345031575
PHKNKTHKN	9	Unmodified	_PHKNKTHKN_					0	0	0		ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3063354492188	2	552.307064	1102.59957	-0.70613	-0.00039	-0.47813	-0.00026407	-1.1843	-0.00065407	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.76255	1	9557	9557		35.618	1.4457	1	1609500			40985	9196	27322	27334	46662	46662					0.052378880345031575
PHKNKTHKN	9	Unmodified	_PHKNKTHKN_					0	0	0		ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3059692382812	2	552.307064	1102.59957	2.2801	0.0012593	-3.3671	-0.0018597	-1.087	-0.00060038	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.69624	1	9956	9956		40.778	1.5253	1	1797400			40986	9196	27322	27334	46663	46663					0.052378880345031575
PHKNKTHKN	9	Unmodified	_PHKNKTHKN_					0	0	0		ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	ENST00000226319.10_1_4:129795591-129795780:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3065795898438	2	552.307064	1102.59957	1.2817	0.0007079	-2.5363	-0.0014008	-1.2546	-0.00069293	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.69624	1	9606	9606		40.778	5.6261	1	1712700			40987	9196	27322	27334	46664	46664					0.052378880345031575
PHLAKIFERVR	11	Unmodified	_PHLAKIFERVR_					0	0	0		nc|ENSG00000163050|Q8NI60-3|COQ8A;ENSG00000163050|ENST00000366777|COQ8A;ENST00000478406.5_1_1:227170215-227170924:+|nuORF;nc|ENSG00000163050|Q8NI60-4|COQ8A;ENST00000485462.5_1_1:227165121-227174435:+|nuORF	nc|ENSG00000163050|Q8NI60-3|COQ8A	nc|ENSG00000163050|Q8NI60-3|COQ8A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.9402160644531	3	455.941973	1364.80409	-0.018225	-8.3094E-06	-2.0697	-0.00094365	-2.0879	-0.00095196	455.940966623884	20.554	1.3955	19.925	19.49	20.885	-0.6296					70	33	4	0	0	0	0.77205	1	692	692		17.167	0.63689	1	132260			40988	5760	27323	27335	46665	46665					0.1362782712499211
PHLALFSL	8	Unmodified	_PHLALFSL_					0	0	0			REV__ENST00000533031.5_1_8:144776853-144777381:+|nuORF	REV__ENST00000533031.5_1_8:144776853-144777381:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.2635498046875	2	449.263271	896.511988	-0.15398	-6.9178E-05	0.25292	0.00011363	0.098943	4.4451E-05	449.263230485054	64.998	0.8704	65.025	64.593	65.464	0.027145					101	32	4	0	0	0	0.73619	1	6186	6186		65.897	11.003	1	2532200	+		40989	28335	27324	27336	46666	46666					0.05959294111039526
PHLHFPVVT	9	Unmodified	_PHLHFPVVT_					0	0	0			REV__chr5:167375473-167875986|22|26.27|0.18|7.18|+|0|TENM2,TENM2|1	REV__chr5:167375473-167875986|22|26.27|0.18|7.18|+|0|TENM2,TENM2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.7929077148438	2	523.792727	1045.5709	1.0577	0.00055402	1.0559	0.0005531	2.1137	0.0011071	523.7931679624304	18.856	0.42497	18.93	18.75	19.175	0.073463					28	12	3	0	0	0	0.7932	1	340	340		20.482	1.1219	1	93038	+		40990	15852	27325	27337	46667	46667					0.049937704053718335
PHLIKISVF	9	Unmodified	_PHLIKISVF_					0	0	0			REV__ENST00000493442.1_1_X:103434464-103434566:+|nuORF	REV__ENST00000493442.1_1_X:103434464-103434566:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.7999877929688	2	527.326402	1052.63825	-0.25171	-0.00013273	4.3608	0.0022995	4.1091	0.0021668	527.3283835279665	62.213	0.39183	62.601	62.317	62.709	0.38846					10	8	2	0	0	0	0.20789	1	6641	6641		30.504	11.144	1	47442	+		40991	27693	27326	27338	46668	46668					0.11403800616312765
PHLKTRQRRKI	11	Unmodified	_PHLKTRQRRKI_					0	0	0		nc|ENSG00000129566|Q99973-2|TEP1;ENSG00000129566|ENST00000262715|TEP1	nc|ENSG00000129566|Q99973-2|TEP1	nc|ENSG00000129566|Q99973-2|TEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.6370544433594	3	478.303904	1431.88988	-0.48825	-0.00023353	-1.5506	-0.00074167	-2.0389	-0.0009752	478.30300632886104	67.214	1.2093	67.178	66.747	67.957	-0.035698					104	51	3	0	0	0	0.79476	1	6442	6442		12.433	2.7867	1	289200			40992	3595	27327	27339	46669	46669					0.1912141203054034
PHLLHVLPG	9	Unmodified	_PHLLHVLPG_					0	0	0		ENST00000531236.1_1_11:71192901-71193895:+|nuORF	ENST00000531236.1_1_11:71192901-71193895:+|nuORF	ENST00000531236.1_1_11:71192901-71193895:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79559326171875	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.78292	1	3357	3357		29.842	6.7991	1	2747400			40993	13354	27328	27340	46670	46670					0.08446074267988024
PHLLHVLPG	9	Unmodified	_PHLLHVLPG_					0	0	0		ENST00000531236.1_1_11:71192901-71193895:+|nuORF	ENST00000531236.1_1_11:71192901-71193895:+|nuORF	ENST00000531236.1_1_11:71192901-71193895:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79620361328125	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.872	1	62.986	62.486	63.486	0.11388								0	0	0	0.32542	1	5489	5489		21.702	1.2205	1				40994	13354	27328	27340	46671	46671					0.08446074267988024
PHLPLFLL	8	Unmodified	_PHLPLFLL_					0	0	0			REV__ENST00000560962.5_1_15:63892664-63892859:-|nuORF	REV__ENST00000560962.5_1_15:63892664-63892859:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	474.5399169921875	2	475.297114	948.579674	0.098253	4.6699E-05	1.2252	0.00058234	1.3235	0.00062904	475.29752539589265	25.308	0.057673	25.413	25.384	25.442	0.1054					4	2	2	0	0	0	0.4196	1	907	907		16.705	6.5202	1	17952	+		40995	28770	27329	27341	46672	46672					0.10332744041841124
PHLPPLPQK	9	Unmodified	_PHLPPLPQK_					0	0	0			REV__ENSG00000173575|ENST00000394196|CHD2	REV__ENSG00000173575|ENST00000394196|CHD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8076171875	2	513.808377	1025.6022	-0.82069	-0.00042168	2.317	0.0011905	1.4963	0.00076881	513.8095156540879	56.98	2.3357	57.013	56.616	58.952	0.033184					104	77	2	0	0	0	0.77546	1	5209	5209		31.955	1.4512	1	188070	+		40996	21933	27330	27342	46673	46673					0.0904234343945518
PHLPRPGHA	9	Unmodified	_PHLPRPGHA_					0	0	0		ENST00000525616.1_1_19:50187319-50188102:+|nuORF;ENST00000454376.6_1_19:50187319-50188233:+|nuORF	ENST00000525616.1_1_19:50187319-50188102:+|nuORF	ENST00000525616.1_1_19:50187319-50188102:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.280029296875	2	491.272493	980.530432	-1.3982	-0.00068688	3.8506	0.0018917	2.4524	0.0012048	491.2742517611415	59.61	0.4857	59.61	59.343	59.829	0					21	16	2	0	0	0	0.76402	1	5181	5181		35.201	0	1	23798			40997	11942	27331	27343	46674	46674					0.03938848805614725
PHLTHLLSA	9	Unmodified	_PHLTHLLSA_					0	0	0		ENST00000262965.9_1_19:1611426-1611666:-|nuORF	ENST00000262965.9_1_19:1611426-1611666:-|nuORF	ENST00000262965.9_1_19:1611426-1611666:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7798156738281	2	494.782359	987.550165	-0.60525	-0.00029947	-3.7112	-0.0018362	-4.3164	-0.0021357	494.7803656183054	83.829	2.2213	83.994	82.644	84.865	0.1651					103	51	3	0	0	0	0.7932	1	8192	8192		24.203	1.166	1	285340			40998	9451	27332	27344	46675	46675					0.055891800257199975
PHLVPPSH	8	Unmodified	_PHLVPPSH_					0	0	0		ENSG00000103966|ENST00000220325|EHD4	ENSG00000103966|ENST00000220325|EHD4	ENSG00000103966|ENST00000220325|EHD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24090576171875	2	442.24287	882.471186	-1.5813	-0.00069932	-2.7796	-0.0012293	-4.3609	-0.0019286	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.89457	1	7788	7788		37.028	1.8278	1	968500			40999	2106	27333	27345	46676	46676					0.025249527914297687
PHPFLGGC	8	Unmodified	_PHPFLGGC_					0	0	0			REV__ENSG00000215474|ENST00000425639|SKOR2	REV__ENSG00000215474|ENST00000425639|SKOR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2374267578125	2	414.197074	826.379594	-1.8288	-0.0007575	-3.8695	-0.0016027	-5.6983	-0.0023602	414.19534799374446	78.944	0.31017	79.075	78.995	79.305	0.13085					11	8	2	0	0	0	0.4196	1	7474	7474		10.185	0	1	80706	+		41000	23686	27334	27346	46677	46677					-0.040540538974028095
PHPFSHPG	8	Unmodified	_PHPFSHPG_					0	0	0			REV__nc|ENSG00000168066|Q15637-4|SF1	REV__nc|ENSG00000168066|Q15637-4|SF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2633972167969	2	438.211569	874.408586	1.6385	0.00071801	4.3108	0.001889	5.9493	0.002607	438.21313445510003	35.565	0.67852	35.946	35.635	36.313	0.3812					32	17	3	0	0	0	0.4196	1	2749	2749		35.201	0	1	241700	+		41001	21458	27335	27347	46678	46678					-0.03364193276763672
PHPLAPAP	8	Unmodified	_PHPLAPAP_					0	0	0		chr12:6938067-6939123|15|19.73|0.07|8.05|+|2|ATN1,None|2	chr12:6938067-6939123|15|19.73|0.07|8.05|+|2|ATN1,None|2	chr12:6938067-6939123|15|19.73|0.07|8.05|+|2|ATN1,None|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.2283935546875	2	400.226688	798.438824	-0.14076	-5.6335E-05	4.0679	0.0016281	3.9271	0.0015717	400.22859684101246	55.169	2.0847	55.161	54.01	56.095	-0.0077095					100	64	3	0	0	0	0.84567	1	4886	4886		24.504	0	1	485630			41002	143	27336	27348	46679	46679					0.031541653884119114
PHPLAPAP	8	Unmodified	_PHPLAPAP_					0	0	0		chr12:6938067-6939123|15|19.73|0.07|8.05|+|2|ATN1,None|2	chr12:6938067-6939123|15|19.73|0.07|8.05|+|2|ATN1,None|2	chr12:6938067-6939123|15|19.73|0.07|8.05|+|2|ATN1,None|2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	400.226688	798.438824	1.9396	0.0007763	0.82933	0.00033192	2.769	0.0011082	400.22746720749507	55.46	1.1518	55.491	54.998	56.15	0.030838	0.4281	-0.0035518	NaN	24.504	66	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	652610			41003	143	27336	27348							0.031541653884119114
PHPLPAPA	8	Unmodified	_PHPLPAPA_					0	0	0		ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.2276916503906	2	400.226688	798.438824	0.9116	0.00036485	-4.0247	-0.0016108	-3.1131	-0.001246	400.2249796888393	16.698	0.31498	16.775	16.543	16.858	0.07715					15	10	2	0	0	0	0.84567	1	122	122		24.504	0	1	29899			41004	2653	27337	27349	46680	46680					0.03154165388400543
PHPPLVPGN	9	Unmodified	_PHPPLVPGN_					0	0	0			REV__nc|ENSG00000122779|O15164-2|TRIM24	REV__nc|ENSG00000122779|O15164-2|TRIM24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2537536621094	2	464.255977	926.497401	-1.597	-0.00074142	-2.6107	-0.001212	-4.2077	-0.0019534	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.5393	1	8220	8220		50.025	6.3985	1	1324500	+		41005	18514	27338	27350	46681	46681					0.03121221962896925
PHRALKPG	8	Unmodified	_PHRALKPG_					0	0	0			REV__ENST00000535095.5_1_12:95867705-95867888:+|nuORF	REV__ENST00000535095.5_1_12:95867705-95867888:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2630310058594	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.86288	1	2924	2924		26.796	0.10319	1	3384400	+		41006	28377	27339	27351	46682	46682					0.07144347919643224
PHRALKPG	8	Unmodified	_PHRALKPG_					0	0	0			REV__ENST00000535095.5_1_12:95867705-95867888:+|nuORF	REV__ENST00000535095.5_1_12:95867705-95867888:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26300048828125	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.86791	1	2670	2670		28.254	6.5519	1	22029000	+		41007	28377	27339	27351	46683	46683					0.07144347919643224
PHRALKPG	8	Unmodified	_PHRALKPG_					0	0	0			REV__ENST00000535095.5_1_12:95867705-95867888:+|nuORF	REV__ENST00000535095.5_1_12:95867705-95867888:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2632141113281	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.82464	1	2830	2830		21.702	0	1	21381000	+		41008	28377	27339	27351	46684	46684					0.07144347919643224
PHRGNGAL	8	Unmodified	_PHRGNGAL_					0	0	0			REV__nc|ENSG00000267493|Q8TBR5|CIRBP-AS1	REV__nc|ENSG00000267493|Q8TBR5|CIRBP-AS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	411.2197570800781	2	411.222469	820.430384	3.0004	0.0012338	-2.8124	-0.0011565	0.18794	7.7287E-05	411.2209736113263	87.027	0.99088	87.082	86.567	87.558	0.055641					38	22	3	0	0	0	0.86791	1	8881	8881		28.254	0	1	257350	+		41009	30257	27340	27352	46685	46685					0.012986114718160024
PHRGPLPQLRP	11	Unmodified	_PHRGPLPQLRP_					0	0	0			REV__chr12:48916250-48923782|18|15.78|0.0|14.1|-|1|TE_info:SVA_D,SVA_D_dup964,SVA,Retroposon,acceptor,-,48915111,48916250|None,FKBP11|1	REV__chr12:48916250-48923782|18|15.78|0.0|14.1|-|1|TE_info:SVA_D,SVA_D_dup964,SVA,Retroposon,acceptor,-,48915111,48916250|None,FKBP11|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8807373046875	2	634.372738	1266.73092	6.8434	0.0043413	0.24082	0.00015277	7.0843	0.0044941	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.70737	1	13793	13793		30.318	2.2362	1	75725	+		41010	15533	27341	27353	46686	46686					0.108226984023986
PHRHSPPLW	9	Unmodified	_PHRHSPPLW_					0	0	0			REV__ENST00000525130.5_1_19:50311835-50312459:-|nuORF	REV__ENST00000525130.5_1_19:50311835-50312459:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.2117309570312	2	563.798875	1125.5832	0.90575	0.00051066	1.441	0.00081244	2.3468	0.0013231	563.7996548593758	29.797	0.64234	29.707	29.191	29.833	-0.089544					16	14	2	0	0	0	0.20789	1	1856	1856		21.96	0	1	57315	+		41011	28177	27342	27354	46687	46687					0.025428068684277605
PHRPVGPG	8	Unmodified	_PHRPVGPG_					0	0	0			REV__ENST00000278836.9_1_11:61553611-61553815:+|nuORF	REV__ENST00000278836.9_1_11:61553611-61553815:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.7398681640625	2	408.727387	815.44022	1.4944	0.00061079	3.3296	0.0013609	4.8239	0.0019717	408.7288454709551	35.666	0.14954	35.914	35.783	35.933	0.24769					5	3	2	0	0	0	0.4196	1	2744	2744		35.201	14.719	1	59277	+		41012	24599	27343	27355	46688	46688					0.025117994771903795
PHRVWKVKFV	10	Unmodified	_PHRVWKVKFV_					0	0	0		ENSG00000128731|ENST00000261609|HERC2;ENST00000566635.5_1_15:28356911-28362639:-|nuORF;ENST00000568206.1_1_15:28362108-28362639:-|nuORF	ENSG00000128731|ENST00000261609|HERC2;ENST00000566635.5_1_15:28356911-28362639:-|nuORF	ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3936157226562	2	648.3904	1294.76625	-1.1411	-0.00073988	4.1578	0.0026959	3.0167	0.001956	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.85958	1	12364	12364		15.642	2.1878	1	2297700			41013	3560;13939	27344	27356	46689	46689					0.13065360930204406
PHSKQIYIHL	10	Unmodified	_PHSKQIYIHL_					0	0	0			REV__nc|ENSG00000176018|Q7Z3D4-3|LYSMD3	REV__nc|ENSG00000176018|Q7Z3D4-3|LYSMD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	618.3461303710938	2	618.348397	1234.68224	-1.2296	-0.00076029	-2.7812	-0.0017197	-4.0107	-0.00248	618.3465539597456	97.787	3.3462	97.982	96.915	100.26	0.19585					219	77	4	0	0	0	0.77314	1	10084	10084		40.778	2.9666	1	806570	+		41014	30049	27345	27357	46690	46690					0.07428785042657182
PHSLFLRL	8	Unmodified	_PHSLFLRL_					0	0	0			REV__ENST00000343106.9_1_4:103747817-103748066:-|nuORF	REV__ENST00000343106.9_1_4:103747817-103748066:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7969055175781	2	491.795269	981.575986	0.72275	0.00035544	0.16401	8.0661E-05	0.88676	0.00043611	491.79524952616435	50.532	2.1367	51.283	50.465	52.601	0.75174					133	51	3	0	0	0	0.91005	1	5063	5063		42.474	1.9018	1	1359500	+		41015	25288	27346	27358	46691	46691					0.08446074267976655
PHSPPPSDQ	9	Unmodified	_PHSPPPSDQ_					0	0	0			REV__ENSG00000136878|ENST00000372429|USP20	REV__ENSG00000136878|ENST00000372429|USP20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.22528076171875	2	481.222331	960.430109	-3.0189	-0.0014528	3.6194	0.0017417	0.60053	0.00028899	481.2239030858985	38.532	0.44539	38.543	38.317	38.762	0.011173					20	9	3	0	0	0	0.64922	1	2626	2626		44.117	1.7207	1	100320	+		41016	19345	27347	27359	46692	46692					-0.05168853038708221
PHSSPYLGP	9	Unmodified	_PHSSPYLGP_					0	0	0			REV__ENSG00000067191|ENST00000394303|CACNB1	REV__ENSG00000067191|ENST00000394303|CACNB1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.73651123046875	2	477.737617	953.460681	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.982	1	66.534	66.034	67.034	0.5526								0	0	0	0.28877	1	7204	7204		35.201	4.6971	1		+		41017	16538	27348	27360	46693	46693					-0.017910746536585975
PHSSSPEH	8	Unmodified	_PHSSSPEH_					0	0	0		nc|ENSG00000141298|Q76I76|SSH2;ENSG00000141298|ENST00000540801|SSH2	nc|ENSG00000141298|Q76I76|SSH2	nc|ENSG00000141298|Q76I76|SSH2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	439.1923522949219	2	439.193574	876.372594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.543	1	68.543	68.043	69.043	0								0	0	0	0.29498	1	6089	6089		26.796	0	1				41018	4489	27349	27361	46694	46694					-0.07053695244280789
PHTPPGGH	8	Unmodified	_PHTPPGGH_					0	0	0			REV__ENST00000560702.1_1_15:37184376-37188970:-|nuORF	REV__ENST00000560702.1_1_15:37184376-37188970:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.1970520019531	2	400.195919	798.377286	0.9179	0.00036734	-2.5045	-0.0010023	-1.5865	-0.00063493	400.1951514766141	86.536	1.7122	86.462	86.013	87.725	-0.073769					84	39	4	0	0	0	0.89457	1	8972	8972		37.028	1.4102	1	3325200	+		41019	19118	27350	27362	46695	46695					-0.02996766310855037
PHTPPGGH	8	Unmodified	_PHTPPGGH_					0	0	0			REV__ENST00000560702.1_1_15:37184376-37188970:-|nuORF	REV__ENST00000560702.1_1_15:37184376-37188970:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.1966552734375	2	400.195919	798.377286	2.9562	0.001183	-3.4082	-0.001364	-0.45205	-0.00018091	400.19504393030127	86.25	1.3268	86.305	85.975	87.302	0.055641					56	30	3	0	0	0	0.90024	1	8815	8815		39.021	0.21535	1	2395800	+		41020	19118	27350	27362	46696	46696					-0.02996766310855037
PHTPPGGH	8	Unmodified	_PHTPPGGH_					0	0	0			REV__ENST00000560702.1_1_15:37184376-37188970:-|nuORF	REV__ENST00000560702.1_1_15:37184376-37188970:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.19683837890625	2	400.195919	798.377286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.761	1	86.208	85.708	86.708	0.44736								0	0	0	0.29831	1	10058	10058		39.021	1.8624	1		+		41021	19118	27350	27362	46697	46697					-0.02996766310855037
PHTRMIVTTRA	11	Unmodified	_PHTRMIVTTRA_					0	0	0		ENST00000274849.2_1_6:26598869-26599091:+|nuORF	ENST00000274849.2_1_6:26598869-26599091:+|nuORF	ENST00000274849.2_1_6:26598869-26599091:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3614501953125	2	641.856064	1281.69757	1.7061	0.001095	3.8489	0.0024705	5.555	0.0035655	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.64498	1	12686	12686		39.253	0	1	27133000			41022	9593	27351	27363	46698	46698					0.06799328568217788
PHTRMIVTTRA	11	Unmodified	_PHTRMIVTTRA_					0	0	0		ENST00000274849.2_1_6:26598869-26599091:+|nuORF	ENST00000274849.2_1_6:26598869-26599091:+|nuORF	ENST00000274849.2_1_6:26598869-26599091:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.85693359375	2	641.856064	1281.69757	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.95	1	119.98	119.48	120.48	0.026466								0	0	0	0.56276	1	13195	13195		31.53	2.3598	1				41023	9593	27351	27363	46699	46699					0.06799328568217788
PHTSHLLP	8	Unmodified	_PHTSHLLP_					0	0	0		nc|ENSG00000164434|O15540-2|FABP7	nc|ENSG00000164434|O15540-2|FABP7	nc|ENSG00000164434|O15540-2|FABP7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.24658203125	2	451.248152	900.481751	-0.14165	-6.3919E-05	1.5144	0.00068335	1.3727	0.00061943	451.24867992302364	67.749	1.1743	67.771	67.401	68.576	0.021599					102	53	2	0	0	0	0.86791	1	6360	6360		28.254	0	1	167670			41024	15059	27352	27364	46700	46700					0.02752935445869298
PHTTSNIEP	9	Unmodified	_PHTTSNIEP_					0	0	0			REV__ENSG00000180210|ENST00000311907|F2	REV__ENSG00000180210|ENST00000311907|F2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.24530029296875	2	498.243264	994.471974	1.4519	0.00072342	1.5887	0.00079156	3.0406	0.001515	498.2440087602618	24.179	2.1197	23.665	22.47	24.589	-0.51365					67	49	2	0	0	0	0.76764	1	1132	1132		34.173	3.6689	1	98752	+	+	41025	15971	27353	27365	46701	46701					-0.02548297350199391
PHTVRPLRSA	10	Unmodified	_PHTVRPLRSA_					0	0	0			REV__ENST00000424148.1_1_11:1594063-1594210:+|nuORF	REV__ENST00000424148.1_1_11:1594063-1594210:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3327026367188	2	567.330539	1132.64652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.42	1	103.68	103.18	104.18	0.26524								0	0	0	0.45132	1	12619	12619		30.318	1.1477	1		+		41026	26516	27354	27366	46702	46702					0.0855074758567298
PHVDLGGN	8	Unmodified	_PHVDLGGN_					0	0	0		nc|ENSG00000188779|P84550-2|SKOR1	nc|ENSG00000188779|P84550-2|SKOR1	nc|ENSG00000188779|P84550-2|SKOR1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.5892639160156	2	404.701035	807.387516	-1.2315	-0.00049837	0.92944	0.00037614	-0.30202	-0.00012223	404.70153263346475	38.856	0.78485	38.809	38.209	38.994	-0.047001					24	17	2	0	0	0	0.4196	1	2766	2766		7.6903	0	1	51982			41027	15171	27355	27367	46703	46703					-0.023882033762788524
PHVKKHGSKL	10	Unmodified	_PHVKKHGSKL_					0	0	0		ENSG00000133104|ENST00000438666|SPART;ENST00000491805.5_1_13:36878504-36886627:-|nuORF	ENSG00000133104|ENST00000438666|SPART	ENSG00000133104|ENST00000438666|SPART	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.2822875976562	2	565.843282	1129.67201	0.50818	0.00028755	-1.4504	-0.00082072	-0.94226	-0.00053317	566.3441378418931	54.857	0.46294	55.426	55.195	55.658	0.56836					12	10	2	0	0	0	0.37624	1	5631	5631		27.882	11.409	1	213470			41028	3855	27356	27368	46704	46704					0.11236222108095717
PHVKKHGSKL	10	Unmodified	_PHVKKHGSKL_					0	0	0		ENSG00000133104|ENST00000438666|SPART;ENST00000491805.5_1_13:36878504-36886627:-|nuORF	ENSG00000133104|ENST00000438666|SPART	ENSG00000133104|ENST00000438666|SPART	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	565.843282	1129.67201	0.6081	0.00034409	-2.947	-0.0016676	-2.3389	-0.0013235	565.8417301725465	55	0.50135	55.405	55.115	55.617	0.4043	-0.010463	-0.0010017	NaN	20.947	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108360			41029	3855	27356	27368							0.11236222108095717
PHVKQTINLSI	11	Unmodified	_PHVKQTINLSI_					0	0	0			REV__ENSG00000071894|ENST00000616140|CPSF1	REV__ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.3681030273438	2	625.366787	1248.71902	-0.058318	-3.647E-05	-0.58575	-0.00036631	-0.64406	-0.00040278	625.3661572785429	103.13	0.64318	103.13	102.83	103.47	0					52	15	4	0	0	0	0.51007	1	10607	10607		51.193	9.7661	1	15149000	+		41030	16630	27357	27369	46705	46705					0.10461036868582596
PHVPIRPI	8	Unmodified	_PHVPIRPI_					0	0	0			REV__ENST00000524501.1_1_11:89867955-89891467:+|nuORF	REV__ENST00000524501.1_1_11:89867955-89891467:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7911071777344	2	464.789987	927.565421	0.17035	7.9177E-05	1.4022	0.00065173	1.5725	0.0007309	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.87276	1	1809	1809		29.842	1.5873	1	283920	+		41031	16751	27358	27370	46706	46706					0.09874091613551172
PHVQVAGKAER	11	Unmodified	_PHVQVAGKAER_					0	0	0		ENSG00000047648|ENST00000337414|ARHGAP6;nc|ENSG00000047648|O43182-4|ARHGAP6;ENST00000489330.6_1_X:11156985-11160533:-|nuORF	ENSG00000047648|ENST00000337414|ARHGAP6	ENSG00000047648|ENST00000337414|ARHGAP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3325805664062	2	596.333279	1190.652	-0.50602	-0.00030176	-0.30093	-0.00017945	-0.80695	-0.00048121	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.68532	1	10166	10166		33.922	1.1711	1	1259900			41032	967	27359	27371	46707	46707					0.06430426377460208
PHVVLVAKR	9	Unmodified	_PHVVLVAKR_					0	0	0			REV__nc|ENSG00000116675|O75061-4|DNAJC6	REV__nc|ENSG00000116675|O75061-4|DNAJC6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.2897033691406	2	509.829643	1017.64473	-0.4951	-0.00025242	-2.2333	-0.0011386	-2.7284	-0.001391	510.3284697627549	22.209	0.19922	22.257	22.164	22.364	0.048553					11	9	2	0	0	0	0.20789	1	646	646		19.36	6.4008	1	64990	+		41033	18210	27360	27372	46708	46708					0.13661738567691373
PHVVLVAKR	9	Unmodified	_PHVVLVAKR_					0	0	0			REV__nc|ENSG00000116675|O75061-4|DNAJC6	REV__nc|ENSG00000116675|O75061-4|DNAJC6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	509.829643	1017.64473	0.75036	0.00038256	-7.2194	-0.0036807	-6.4691	-0.0032981	510.3264158591172	22.434	0.16286	22.425	22.371	22.533	-0.0088215	0.083763	-0.0017942	NaN	19.36	7	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135750	+		41034	18210	27360	27372							0.13661738567691373
PIAERKLW	8	Unmodified	_PIAERKLW_					0	0	0			REV__nc|ENSG00000204618|Q9H2S5-2|RNF39	REV__nc|ENSG00000204618|Q9H2S5-2|RNF39	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8006896972656	2	506.800552	1011.58655	-1.4266	-0.00072302	3.1878	0.0016156	1.7612	0.00089255	506.8022071365967	51.979	1.1494	51.979	51.46	52.609	0					48	30	2	0	0	0	0.81548	1	4275	4275		20.482	4.0087	1	87647	+		41035	30162	27361	27373	46709	46709					0.08122056922411502
PIAGYNWIY	9	Unmodified	_PIAGYNWIY_					0	0	0			REV__ENSG00000180817|ENST00000373232|PPA1	REV__ENSG00000180817|ENST00000373232|PPA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.775634765625	2	548.776742	1095.53893	-1.6127	-0.00088502	-2.3259	-0.0012764	-3.9386	-0.0021614	548.7753397191622	47.284	1.1601	47.756	47.388	48.548	0.47139					59	28	3	0	0	0	0.32449	1	4515	4515		62.978	10.042	1	2400700	+		41036	22419	27362	27374	46710	46710					-0.005016420684341938
PIAIPNKP	8	Unmodified	_PIAIPNKP_					0	0	0		nc|ENSG00000118729|O14958-2|CASQ2;ENSG00000118729|ENST00000261448|CASQ2	nc|ENSG00000118729|O14958-2|CASQ2	nc|ENSG00000118729|O14958-2|CASQ2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.804443359375	2	425.263271	848.511988	0.3144	0.0001337	-0.12673	-5.3893E-05	0.18767	7.981E-05	425.2630641420517	19.284	0.26726	18.654	18.444	18.711	-0.6296					10	5	2	0	0	0	0.4196	1	485	485		9.4706	0	1	24357			41037	3043	27363	27375	46711	46711					0.08167294111046886
PIAKAKMV	8	Oxidation (M)	_PIAKAKM(Oxidation (M))V_		PIAKAKM(1)V		PIAKAKM(42)V	0	0	1		ENSG00000167548|ENST00000301067|KMT2D;nc|ENSG00000167548|O14686-3|KMT2D	ENSG00000167548|ENST00000301067|KMT2D	ENSG00000167548|ENST00000301067|KMT2D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26483154296875	2	437.264956	872.515359	-2.1128	-0.00092385	3.801	0.001662	1.6882	0.00073819	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.91005	1	860	860		42.474	26.833	1	1366900			41038	6301	27364	27376	46712	46712		108			0.0740022089340755
PIAKVMCL	8	Unmodified	_PIAKVMCL_					0	0	0			REV__ENST00000262644.8_1_8:57876224-57876296:-|nuORF	REV__ENST00000262644.8_1_8:57876224-57876296:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.77362060546875	2	437.748085	873.481616	-0.79054	-0.00034606	1.8718	0.00081937	1.0812	0.00047331	437.74855511448294	27.782	0.86607	27.685	27.228	28.094	-0.096945					28	19	2	0	0	0	0.4196	1	1570	1570		20.482	0	1	85117	+		41039	24428	27365	27377	46713	46713					0.03981476129990824
PIAKWVVRRS	10	Unmodified	_PIAKWVVRRS_					0	0	0		ENSG00000168769|ENST00000380013|TET2	ENSG00000168769|ENST00000380013|TET2	ENSG00000168769|ENST00000380013|TET2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	606.3717651367188	2	606.372207	1210.72986	-0.28087	-0.00017031	-4.0857	-0.0024774	-4.3666	-0.0026478	606.369636454931	94.737	2.9757	94.737	93.326	96.302	0					126	69	2	0	0	0	0.8651	1	9437	9437		25.574	0.44807	1	318720			41040	6432	27366	27378	46714	46714					0.13292484033490837
PIAQRKGH	8	Unmodified	_PIAQRKGH_					0	0	0		ENST00000495002.5_1_19:54710350-54711440:+|nuORF	ENST00000495002.5_1_19:54710350-54711440:+|nuORF	ENST00000495002.5_1_19:54710350-54711440:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.7660827636719	2	453.767043	905.519533	-0.68019	-0.00030865	-1.9784	-0.00089773	-2.6586	-0.0012064	453.76595867502624	41.947	1.3916	41.95	41.419	42.811	0.0034142					70	33	3	0	0	0	0.87276	1	3195	3195		29.842	0.69198	1	213660			41041	12759	27367	27379	46715	46715					0.0629944643133058
PIDLITKGQVK	11	Unmodified	_PIDLITKGQVK_					0	0	0		ENSG00000234828|ENST00000636793|IQCM	ENSG00000234828|ENST00000636793|IQCM	ENSG00000234828|ENST00000636793|IQCM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	606.3716430664062	2	606.371538	1210.72852	-0.28087	-0.00017031	-2.9829	-0.0018087	-3.2638	-0.0019791	606.369636454931	94.737	2.9757	94.737	93.326	96.302	0					126	69	2	0	0	0	0.72106	1	9379	9379		28.081	4.5588	1	318720			41042	8747	27368	27380	46716	46716					0.13158805154057518
PIDTALKELVL	11	Unmodified	_PIDTALKELVL_					0	0	0			REV__ENST00000474123.1_1_7:105190513-105195680:+|nuORF	REV__ENST00000474123.1_1_7:105190513-105195680:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3695678710938	2	606.365921	1210.71729	2.2948	0.0013915	3.5883	0.0021758	5.8831	0.0035673	606.3679986963975	94.415	3.2479	94.356	93.249	96.497	-0.059212					198	76	3	0	0	0	0.75544	1	10080	10080		20.837	0.80668	1	800340	+		41043	19202	27369	27381	46717	46717					0.12035983059945465
PIDVLLIQ	8	Unmodified	_PIDVLLIQ_					0	0	0			REV__ENST00000307641.9_1_17:40176074-40176263:+|nuORF	REV__ENST00000307641.9_1_17:40176074-40176263:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.7839660644531	2	455.784036	909.553519	-2.4291	-0.0011071	3.9811	0.0018145	1.552	0.00070738	455.7856610041375	42.193	1.6759	42.607	41.973	43.649	0.4139					65	41	2	0	0	0	0.84341	2	3758	3707;3758		30.504	5.0535	1	3100600	+		41044	24849	27370	27382	46718;46719	46719					0.09512430079723799
PIDVLLIQ	8	Unmodified	_PIDVLLIQ_					0	0	0			REV__ENST00000307641.9_1_17:40176074-40176263:+|nuORF	REV__ENST00000307641.9_1_17:40176074-40176263:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.7843322753906	2	455.784036	909.553519	-1.7491	-0.00079722	3.2958	0.0015022	1.5467	0.00070496	455.78533618800145	42.014	1.5481	42.712	42.124	43.672	0.69754					60	38	2	0	0	0	0.84341	1	3740	3740		24.203	0	1	3887800	+		41045	24849	27370	27382	46720	46720					0.09512430079723799
PIENEEQF	8	Unmodified	_PIENEEQF_					0	0	0			REV__ENSG00000168497|ENST00000304141|CAVIN2	REV__ENSG00000168497|ENST00000304141|CAVIN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.2837829589844	2	503.229822	1004.44509	0.0027169	1.3672E-06	2.3212	0.0011681	2.3239	0.0011695	503.22961087982515	55.101	1.006	55.502	55.027	56.033	0.40101					31	23	3	0	0	0	0.4196	1	5570	5570		68.485	0	1	126150	+		41046	21493	27371	27383	46721	46721					-0.05695405961364486
PIFGKKGGQCI	11	Unmodified	_PIFGKKGGQCI_					0	0	0			REV__ENST00000369483.5_1_1:117119116-117119293:-|nuORF	REV__ENST00000369483.5_1_1:117119116-117119293:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3193969726562	2	574.318251	1146.62195	-0.44784	-0.0002572	2.6867	0.001543	2.2389	0.0012858	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.68378	1	9320	9320		34.173	3.8548	1	1099700	+		41047	25622	27372	27384	46722	46722					0.054503513879353704
PIFQEKLKAPD	11	Unmodified	_PIFQEKLKAPD_					0	0	0		ENST00000501931.1_1_15:76022724-76024487:-|nuORF	ENST00000501931.1_1_15:76022724-76024487:-|nuORF	ENST00000501931.1_1_15:76022724-76024487:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.37158203125	2	643.36117	1284.70779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.59	1	116.57	116.07	117.07	-0.014999								0	0	0	0.56276	1	13981	13981		18.262	0.79408	1				41048	12847	27373	27385	46723	46723					0.07682214774399654
PIFRGAGQ	8	Unmodified	_PIFRGAGQ_					0	0	0			REV__nc|ENSG00000113657|Q14195|DPYSL3	REV__nc|ENSG00000113657|Q14195|DPYSL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.8982849121094	2	423.235045	844.455536	0.83509	0.00035344	0.68458	0.00028974	1.5197	0.00064318	423.2363248477613	28.998	0.25935	28.825	28.674	28.933	-0.17336					6	5	2	0	0	0	0.4196	1	1799	1799		12.207	3.9756	1	27633	+		41049	18007	27374	27386	46724	46724					0.027086662743727175
PIFSQHTLL	9	Unmodified	_PIFSQHTLL_					0	0	0		nc|ENSG00000197808|Q8TAF7-2|ZNF461;ENSG00000197808|ENST00000588268|ZNF461	nc|ENSG00000197808|Q8TAF7-2|ZNF461	nc|ENSG00000197808|Q8TAF7-2|ZNF461	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.2727661132812	2	528.297842	1054.58113	0.13954	7.3719E-05	-0.69281	-0.00036601	-0.55327	-0.00029229	528.2971927901915	75.208	0.40021	75.773	75.626	76.026	0.56458					17	9	2	0	0	0	0.20789	1	8518	8518		44.117	1.7207	1	148530			41050	8200	27375	27387	46725	46725					0.05602333339948018
PIGDYPSRAKI	11	Unmodified	_PIGDYPSRAKI_					0	0	0		nc|ENSG00000143194|Q96JY0-3|MAEL;nc|ENSG00000143194|Q96JY0-2|MAEL;ENSG00000143194|ENST00000367872|MAEL	nc|ENSG00000143194|Q96JY0-3|MAEL	nc|ENSG00000143194|Q96JY0-3|MAEL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.8363037109375	2	608.837862	1215.66117	0.09385	5.714E-05	-1.5088	-0.00091863	-1.415	-0.00086149	608.836828431824	110.46	1.0631	110.5	110.23	111.29	0.031738					103	33	4	0	0	0	0.7342	1	12149	12149		25.574	1.0549	1	3714300			41051	4610	27376	27388	46726	46726					0.061967749431460106
PIGGLMLL	8	Unmodified	_PIGGLMLL_					0	0	0			REV__ENSG00000115665|ENST00000264047|SLC5A7	REV__ENSG00000115665|ENST00000264047|SLC5A7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.22454833984375	2	407.248775	812.482997	-0.34206	-0.0001393	4.1164	0.0016764	3.7744	0.0015371	407.2507644072836	38.181	0.35686	38.704	38.473	38.83	0.52235					10	8	2	0	0	0	0.4196	1	3122	3122		16.705	6.5202	1	62000	+		41052	18141	27377	27389	46727	46727					0.06925433490403066
PIGLVTEHVY	10	Unmodified	_PIGLVTEHVY_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF;REV__ENSG00000283528|ENST00000636941|TCAF2C	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.3082275390625	2	564.308406	1126.60226	-0.011783	-6.6491E-06	0.28924	0.00016322	0.27746	0.00015657	564.3084317451929	74.641	0.65188	75.032	74.665	75.317	0.39111					44	15	4	0	0	0	0.67608	1	8407	8407		45.952	0	1	1050900	+		41053	23324;21652	27378	27390	46728	46728					0.04402298648801661
PIGRKLLV	8	Unmodified	_PIGRKLLV_					0	0	0		ENST00000525625.1_1_11:125884983-125893371:-|nuORF;ENSG00000064309|ENST00000531738|CDON;nc|ENSG00000064309|Q4KMG0|CDON	ENST00000525625.1_1_11:125884983-125893371:-|nuORF	ENST00000525625.1_1_11:125884983-125893371:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.3074035644531	2	448.308013	894.601472	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.165	1	81.105	80.605	81.605	-0.059692								0	0	0	0.29871	1	8182	8182		23.037	1.3344	1				41054	1101	27379	27391	46729	46729					0.1499554879040943
PIGVRKSV	8	Unmodified	_PIGVRKSV_					0	0	0			REV__nc|ENSG00000177303|Q8WXE0-2|CASKIN2	REV__nc|ENSG00000177303|Q8WXE0-2|CASKIN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3025817871094	2	428.27417	854.533787	-0.2277	-9.7519E-05	-0.71251	-0.00030515	-0.94021	-0.00040267	428.2728613867355	70.566	0.20949	70.95	70.832	71.041	0.38416					5	4	2	0	0	0	0.4196	1	7812	7812		16.473	11.386	1	27646	+		41055	22193	27380	27392	46730	46730					0.10070098859614518
PIGVTETY	8	Unmodified	_PIGVTETY_					0	0	0			REV__ENST00000455773.7_1_10:12279256-12291616:+|nuORF	REV__ENST00000455773.7_1_10:12279256-12291616:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2254638671875	2	440.226551	878.438549	0.48149	0.00021197	-2.7897	-0.0012281	-2.3082	-0.0010161	440.2250332990426	17.328	0.27758	16.718	16.52	16.798	-0.6107					8	5	2	0	0	0	0.91005	1	253	253		42.474	7.2737	1	65278	+		41056	26947	27381	27393	46731	46731					-0.005532991221002703
PIGYATCT	8	Unmodified	_PIGYATCT_					0	0	0			REV__nc|ENSG00000102755|P17948-3|FLT1	REV__nc|ENSG00000102755|P17948-3|FLT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1938781738281	2	413.194196	824.37384	-1.822	-0.00075285	0.39281	0.00016231	-1.4292	-0.00059055	413.19424312894233	83.437	1.3729	83.602	83.104	84.477	0.1651					59	31	2	0	0	0	0.86791	1	8078	8078		28.254	0	1	372750	+		41057	17351	27382	27394	46732	46732					-0.0453719719973833
PIHSVKTIPE	10	Unmodified	_PIHSVKTIPE_					0	0	0			REV__ENSG00000077684|ENST00000226319|JADE1	REV__ENSG00000077684|ENST00000226319|JADE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3405151367188	2	560.821681	1119.62881	-1.1551	-0.00064778	-2.1718	-0.001218	-3.3268	-0.0018658	560.820369667857	90.508	2.3035	90.577	89.127	91.431	0.069328					135	54	4	0	0	0	0.37624	1	9173	9173		22.58	8.4425	1	327520	+		41058	16752	27383	27395	46733	46733					0.07377987540144204
PIIEPLIKE	9	Unmodified	_PIIEPLIKE_					0	0	0			REV__ENSG00000089154|ENST00000300648|GCN1	REV__ENSG00000089154|ENST00000300648|GCN1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.32421875	2	526.323525	1050.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.992	1	56.056	55.556	56.556	0.063725								0	0	0	0.30053	1	4711	4711		30.504	3.7075	1		+		41059	16963	27384	27396	46734	46734					0.10920657313999982
PIIGLEKGVKN	11	Unmodified	_PIIGLEKGVKN_					0	0	0			REV__ENST00000530122.1_1_20:57266543-57280604:+|nuORF	REV__ENST00000530122.1_1_20:57266543-57280604:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.356689453125	2	584.358431	1166.70231	-0.79353	-0.00046371	-3.4252	-0.0020015	-4.2187	-0.0024653	584.356586051485	92.738	2.8775	92.808	91.472	94.349	0.06987					192	67	3	0	0	0	0.73893	1	9594	9594		24.519	0.99649	1	594900	+		41060	23685	27385	27397	46735	46735					0.1256253598260173
PIIGLVKQ	8	Unmodified	_PIIGLVKQ_					0	0	0			REV__nc|ENSG00000171634|Q12830-4|BPTF	REV__nc|ENSG00000171634|Q12830-4|BPTF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.2872619628906	2	434.286746	866.558939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.336	1	58.306	57.806	58.806	-0.029865								0	0	0	0.30004	1	5420	5420		21.702	0	1		+		41061	21757	27386	27398	46736	46736					0.12032153662175915
PIIKGAIR	8	Unmodified	_PIIKGAIR_					0	0	0			REV__nc|ENSG00000033178|A0AVT1-2|UBA6	REV__nc|ENSG00000033178|A0AVT1-2|UBA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.2925109863281	2	434.292362	866.570172	-1.3365	-0.00058044	1.4956	0.00064951	0.15904	6.9069E-05	434.2928799544304	74.19	1.0466	74.276	73.895	74.942	0.085907					77	42	2	0	0	0	0.82464	1	6828	6828		21.702	1.2205	1	1072300	+		41062	16282	27387	27399	46737	46737					0.13154975756310705
PIIKRETLEL	10	Unmodified	_PIIKRETLEL_					0	0	0		ENSG00000081014|ENST00000261842|AP4E1;nc|ENSG00000081014|Q9UPM8-2|AP4E1;ENST00000558439.5_1_15:51226794-51242057:+|nuORF	ENSG00000081014|ENST00000261842|AP4E1	ENSG00000081014|ENST00000261842|AP4E1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	606.37060546875	2	606.371538	1210.72852	1.0648	0.00064567	-4.4512	-0.0026991	-3.3863	-0.0020534	606.3686977940384	94.008	3.2437	94.236	93.32	96.564	0.22863					196	77	3	0	0	0	0.85251	1	9650	9650		19.997	0.89325	1	863300			41063	1457	27388	27400	46738	46738					0.13158805154102993
PIILKRKR	8	Unmodified	_PIILKRKR_					0	0	0		ENSG00000126705|ENST00000673934|AHDC1	ENSG00000126705|ENST00000673934|AHDC1	ENSG00000126705|ENST00000673934|AHDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.3613891601562	2	512.361111	1022.70767	-0.13841	-7.0915E-05	0.35065	0.00017966	0.21225	0.00010875	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.81548	1	7387	7387		20.482	0	1	293160			41064	3460	27389	27401	46739	46739					0.19722304355730103
PIIPLFPVV	9	Unmodified	_PIIPLFPVV_					0	0	0		nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;ENSG00000158987|ENST00000509018|RAPGEF6;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6	nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6	nc|ENSG00000158987|Q8TEU7-5|RAPGEF6	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.8311767578125	2	497.820421	993.62629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.358	1	16.358	15.858	16.858	0								0	0	0	0.30219	1	117	117		29.842	12.477	1				41065	5506;15030	27390	27402	46740	46740					0.12922183873138238
PIKLLPPLT	9	Unmodified	_PIKLLPPLT_					0	0	0			REV__MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|22|2|sense	REV__MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|22|2|sense	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.8323974609375	2	496.331153	990.647754	-1.3548	-0.00067244	4.1362	0.0020529	2.7813	0.0013805	496.3331234696485	60.849	0.87923	60.849	60.216	61.095	0					55	36	2	0	0	0	0.20789	1	5340	5340		10.866	0	1	67017	+		41066	29645	27391	27403	46741	46741					0.15205568901831157
PIKLVTTLIR	10	Unmodified	_PIKLVTTLIR_					0	0	0			REV__ENSG00000171496|ENST00000641027|OR1L8	REV__ENSG00000171496|ENST00000641027|OR1L8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.366455078125	2	577.386991	1152.75943	-0.96399	-0.0005566	-3.5127	-0.0020282	-4.4767	-0.0025848	577.3852246806264	102.43	0.2345	102.45	102.36	102.6	0.01989					7	5	2	0	0	0	0.37624	1	10992	10992		24.519	0	1	76580	+		41067	21739	27392	27404	46742	46742					0.18916003258982528
PIKRVGNG	8	Unmodified	_PIKRVGNG_					0	0	0			REV__nc|ENSG00000048342|Q9P2K1-5|CC2D2A	REV__nc|ENSG00000048342|Q9P2K1-5|CC2D2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.7547302246094	2	420.756144	839.497735	0.18337	7.7154E-05	-2.3767	-0.001	-2.1933	-0.00092286	420.7550318985828	22.352	1.7415	21.741	20.512	22.253	-0.6107					82	43	2	0	0	0	0.81548	1	847	847		20.482	6.7065	1	550570	+		41068	29688	27393	27405	46743	46743					0.07156641682752252
PIKTAVVP	8	Unmodified	_PIKTAVVP_					0	0	0		nc|ENSG00000181827|Q2KHR2-1|RFX7;nc|ENSG00000181827|Q2KHR2-2|RFX7;ENSG00000181827|ENST00000559447|RFX7	nc|ENSG00000181827|Q2KHR2-1|RFX7	nc|ENSG00000181827|Q2KHR2-1|RFX7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76727294921875	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.8347	1	2680	2680		23.042	1.3402	1	2097300			41069	7408	27394	27406	46744	46744					0.0979217825380374
PILAGIMFL	9	Unmodified	_PILAGIMFL_					0	0	0			REV__nc|ENSG00000143921|Q9H221-2|ABCG8	REV__nc|ENSG00000143921|Q9H221-2|ABCG8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.79193115234375	2	487.790807	973.56706	0.6235	0.00030414	-1.5237	-0.00074322	-0.90016	-0.00043909	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.78292	1	7726	7726		29.842	8.1392	1	479320	+		41070	19855	27395	27407	46745	46745					0.07921964587285402
PILAPRKIL	9	Unmodified	_PILAPRKIL_					0	0	0		ENST00000539891.5_1_11:62649445-62650141:+|nuORF;ENST00000538682.5_1_11:62649445-62650469:+|nuORF	ENST00000539891.5_1_11:62649445-62650141:+|nuORF	ENST00000539891.5_1_11:62649445-62650141:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8564758300781	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.78	1	113.79	113.29	114.29	0.0011978								0	0	0	0.35004	1	13732	13732		14.664	0	1				41071	13469	27396	27408	46746	46746					0.17648079887305812
PILEVTLTP	9	Unmodified	_PILEVTLTP_					0	0	0		ENSG00000147459|ENST00000276440|DOCK5;ENST00000467709.6_1_8:25191660-25227073:+|nuORF	ENSG00000147459|ENST00000276440|DOCK5	ENSG00000147459|ENST00000276440|DOCK5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956848144531	2	491.794601	981.574648	-0.71316	-0.00035073	3.1449	0.0015467	2.4318	0.0011959	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.78058	1	3879	3879		30.504	1.3541	1	1219600			41072	4904	27397	27409	46747	46747					0.08312395388554705
PILKILGLI	9	Unmodified	_PILKILGLI_					0	0	0		nc|ENSG00000188687|Q9BY07-4|SLC4A5	nc|ENSG00000188687|Q9BY07-4|SLC4A5	nc|ENSG00000188687|Q9BY07-4|SLC4A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.3475646972656	2	490.349346	978.684139	-0.25712	-0.00012608	-2.4886	-0.0012203	-2.7457	-0.0013464	490.348019282133	71.074	3.0831	71.621	70.349	73.432	0.54756					147	75	2	0	0	0	0.7932	1	7894	7894		13.775	0	1	346390			41073	15170	27398	27410	46748	46748					0.19394445798559445
PILLVLSQ	8	Unmodified	_PILLVLSQ_					0	0	0		chr1:154273598-154273783|20|12.9|0.62|4.37|+|0|HAX1,HAX1|1	chr1:154273598-154273783|20|12.9|0.62|4.37|+|0|HAX1,HAX1|1	chr1:154273598-154273783|20|12.9|0.62|4.37|+|0|HAX1,HAX1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.787841796875	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.82464	2	3231	3231;3243		21.702	0	1	4170800			41074	23	27399	27411	46749;46750	46749					0.11308733942325944
PILPTIIILS	10	Unmodified	_PILPTIIILS_					0	0	0		chr11:123095922-123097795|13|20.46|0.16|6.97|-|0|TE_info:MER31B,MER31B_dup1094,ERV1,LTR,acceptor,-,123095570,123095922|None,CLMP|3	chr11:123095922-123097795|13|20.46|0.16|6.97|-|0|TE_info:MER31B,MER31B_dup1094,ERV1,LTR,acceptor,-,123095570,123095922|None,CLMP|3	chr11:123095922-123097795|13|20.46|0.16|6.97|-|0|TE_info:MER31B,MER31B_dup1094,ERV1,LTR,acceptor,-,123095570,123095922|None,CLMP|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.3585205078125	2	540.357368	1078.70018	-0.017297	-9.3466E-06	2.5708	0.0013891	2.5535	0.0013798	540.3585627881598	36.881	1.2861	36.905	36.409	37.695	0.023624					76	34	3	0	0	0	0.88945	1	2056	2056		10.866	0	1	515190			41075	95	27400	27412	46751	46751					0.16398107244822313
PILPVTELT	9	Unmodified	_PILPVTELT_					0	0	0			REV__nc|ENSG00000188554|Q14596-2|NBR1	REV__nc|ENSG00000188554|Q14596-2|NBR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.795166015625	2	491.794601	981.574648	-1.4502	-0.0007132	3.9522	0.0019437	2.502	0.0012305	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.7932	1	4687	4687		26.796	2.5934	1	1043600	+		41076	23010	27401	27413	46752	46752					0.08312395388554705
PILSLSPFVQN	11	Unmodified	_PILSLSPFVQN_					0	0	0			REV__ENSG00000187689|ENST00000339336|AMTN	REV__ENSG00000187689|ENST00000339336|AMTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5646057128906	3	405.564168	1213.67067	-1.5858	-0.00064316	2.9135	0.0011816	1.3277	0.00053847	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.76322	1	5218	5218		17.167	4.2093	1	181560	+		41077	22933	27402	27414	46753	46753					0.07238543228686467
PILSTILLLL	10	Unmodified	_PILSTILLLL_					0	0	0		ENSG00000075461|ENST00000262138|CACNG4	ENSG00000075461|ENST00000262138|CACNG4	ENSG00000075461|ENST00000262138|CACNG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.373291015625	2	548.373018	1094.73148	-0.014191	-7.7821E-06	2.2319	0.0012239	2.2178	0.0012162	548.374000997207	35.509	1.288	35.453	35.002	36.29	-0.055901					73	28	3	0	0	0	0.86444	1	2360	2360		14.865	3.3539	1	330260			41078	1335	27403	27415	46754	46754					0.18790680278902983
PILVETPK	8	Unmodified	_PILVETPK_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2606506347656	2	448.776211	895.537869	-1.1164	-0.000501	4.0739	0.0018283	2.9575	0.0013273	448.7778169476688	69.303	0.90701	69.369	68.723	69.63	0.065506					58	40	2	0	0	0	0.4196	1	6189	6189		11.511	0	1	116880			41079	2287	27404	27416	46755	46755					0.08592143562657384
PILVEVKKPKS	11	Unmodified	_PILVEVKKPKS_					0	0	0		ENSG00000173705|ENST00000309558|SUSD5	ENSG00000173705|ENST00000309558|SUSD5	ENSG00000173705|ENST00000309558|SUSD5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2677307128906	3	413.267463	1236.78056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.481	1	48.519	48.019	49.019	0.037731								0	0	0	0.56276	1	3696	3696		21.032	1.7696	1				41080	6881	27405	27417	46756	46756					0.17163968567842858
PILVGSVAL	9	Unmodified	_PILVGSVAL_					0	0	0			REV__ENSG00000278195|ENST00000610913|SSTR3	REV__ENSG00000278195|ENST00000610913|SSTR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801513671875	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.7932	1	3331	3331		25.45	1.2474	1	15771000	+		41081	24032	27406	27418	46757	46757					0.10388447425270897
PIPGAVRTVES	11	Unmodified	_PIPGAVRTVES_					0	0	0		ENST00000586118.5_1_18:47802317-47803521:-|nuORF	ENST00000586118.5_1_18:47802317-47803521:-|nuORF	ENST00000586118.5_1_18:47802317-47803521:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	563.3193359375	2	563.316763	1124.61897	-1.0735	-0.0006047	0.61255	0.00034506	-0.46092	-0.00025964	563.8174777116847	55.775	1.0022	55.775	55.238	56.24	0					49	27	4	0	0	0	0.7144	1	4794	4794		29.17	1.2878	1	74923			41082	14157	27407	27419	46758	46758					0.06164799534781196
PIPIIYLDEHT	11	Unmodified	_PIPIIYLDEHT_					0	0	0			REV__nc|ENSG00000141753|P22692-2|IGFBP4	REV__nc|ENSG00000141753|P22692-2|IGFBP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.5710144042969	3	437.571211	1309.6918	-0.1105	-4.835E-05	-2.2663	-0.00099168	-2.3768	-0.00104	437.5698703487814	34.695	0.63161	34.691	34.376	35.008	-0.0047417					34	16	3	0	0	0	0.73621	1	2101	2101		25.126	0	1	62620	+		41083	19709	27408	27420	46759	46759					0.049345085374852715
PIPIPIPVPLP	11	Unmodified	_PIPIPIPVPLP_					0	0	0			REV__ENSG00000112320|ENST00000317357|SOBP	REV__ENSG00000112320|ENST00000317357|SOBP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.3687744140625	2	576.873185	1151.73182	-0.46362	-0.00026745	-4.4607	-0.0025732	-4.9243	-0.0028407	576.870587609785	44.658	1.4188	44.654	44.244	45.663	-0.0041618					45	32	2	0	0	0	0.17378	1	3515	3515		31.955	8.4322	1	105880	+		41084	17941	27409	27421	46760	46760					0.1620209999873623
PIPPRMTPKPC	11	Unmodified	_PIPPRMTPKPC_					0	0	0		nc|ENSG00000119608|Q3B8N5|PROX2;ENSG00000119608|ENST00000556489|PROX2	nc|ENSG00000119608|Q3B8N5|PROX2	nc|ENSG00000119608|Q3B8N5|PROX2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.8303833007812	2	618.833211	1235.65187	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.32	1	16.24	15.74	16.74	-0.080017								0	0	0	0.56276	1	102	102		29.17	4.6509	1				41085	3077	27410	27422	46761	46761					0.04346967061610485
PIPRKRKNS	9	Unmodified	_PIPRKRKNS_					0	0	0		ENSG00000164684|ENST00000327835|ZNF704	ENSG00000164684|ENST00000327835|ZNF704	ENSG00000164684|ENST00000327835|ZNF704	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.3017578125	2	548.340907	1094.66726	-0.3801	-0.00020843	4.1337	0.0022667	3.7536	0.0020582	548.3430143965054	25.359	1.1267	25.03	24.703	25.83	-0.32825					41	25	2	0	0	0	0.20789	1	1268	1268		14.865	3.9993	1	83290			41086	5989	27411	27423	46762	46762					0.12371337965328166
PIPRKRKNS	9	Unmodified	_PIPRKRKNS_					0	0	0		ENSG00000164684|ENST00000327835|ZNF704	ENSG00000164684|ENST00000327835|ZNF704	ENSG00000164684|ENST00000327835|ZNF704	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	548.340907	1094.66726	2.4062	0.0013194	1.0519	0.00057681	3.4582	0.0018963	548.3413563249821	25.439	1.1131	25.008	24.541	25.654	-0.4311	-0.011059	-0.0012789	NaN	9.7057	50	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147360			41087	5989	27411	27423							0.12371337965328166
PIPRNVSLIA	10	Unmodified	_PIPRNVSLIA_					0	0	0			REV__ENSG00000198753|ENST00000361971|PLXNB3	REV__ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.3311157226562	2	540.332216	1078.64988	0.73412	0.00039667	-4.4057	-0.0023806	-3.6716	-0.0019839	540.3297192888753	88.578	3.0781	88.728	87.598	90.676	0.15055					169	72	3	0	0	0	0.8505	1	8783	8783		19.104	0.77911	1	476540	+		41088	23374	27412	27424	46763	46763					0.11369997639690155
PIPTRVCKV	9	Unmodified	_PIPTRVCKV_					0	0	0		ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-2|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8014221191406	2	506.802237	1011.58992	-0.74642	-0.00037829	-1.7572	-0.00089057	-2.5037	-0.0012689	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.7932	1	3731	3731		25.574	5.5773	1	258120			41089	4579	27413	27425	46764	46764					0.08458983704770162
PIPVLLVSL	9	Unmodified	_PIPVLLVSL_					0	0	0		nc|ENSG00000179873|P59045-3|NLRP11;ENSG00000179873|ENST00000589093|NLRP11;nc|ENSG00000179873|P59045-2|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	475.8202209472656	2	475.817879	949.621205	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.598	1	48.598	48.098	49.098	0								0	0	0	0.33676	1	3781	3781		18.324	10.093	1				41090	7299	27414	27426	46765	46765					0.1443788001053008
PIQAHSRKPGT	11	Unmodified	_PIQAHSRKPGT_					0	0	0		ENST00000531905.1_1_11:65631192-65631594:+|nuORF	ENST00000531905.1_1_11:65631192-65631594:+|nuORF	ENST00000531905.1_1_11:65631192-65631594:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.3323974609375	2	596.333279	1190.652	-1.3013	-0.00077598	0.61641	0.00036758	-0.68485	-0.0004084	596.3335316328556	96.129	3.5172	96.331	95.353	98.87	0.20242					227	81	4	0	0	0	0.7144	1	9830	9830		29.17	1.0886	1	1353000			41091	13367	27415	27427	46766	46766					0.06430426377460208
PIQFLVPGR	9	Unmodified	_PIQFLVPGR_					0	0	0			REV__ENST00000456101.6_1_6:109766698-109772967:-|nuORF	REV__ENST00000456101.6_1_6:109766698-109772967:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.80908203125	2	513.808377	1025.6022	0.034734	1.7846E-05	1.2224	0.00062807	1.2571	0.00064592	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.78983	1	4572	4572		27.882	0	1	666950	+		41092	26951	27416	27428	46767	46767					0.0904234343945518
PIQIQSQNP	9	Unmodified	_PIQIQSQNP_					0	0	0			REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.7742919921875	2	512.774731	1023.53491	-1.4965	-0.00076736	0.77005	0.00039486	-0.72642	-0.00037249	512.7750166374884	45.034	0.8504	45.034	44.739	45.589	0					37	20	3	0	0	0	0.39367	2	3303	3294;3303		58.23	14.325	1	378360	+		41093	26621	27417	27429	46768;46769	46769					0.02408268437852712
PIQIQSQNP	9	Unmodified	_PIQIQSQNP_					0	0	0			REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.7739868164062	2	512.774731	1023.53491	0.25231	0.00012938	-0.8261	-0.0004236	-0.57379	-0.00029423	512.774198051591	45.3	0.73182	45.281	44.968	45.7	-0.018585					35	16	3	0	0	0	0.41566	1	3582	3582		56.721	6.6965	1	555070	+		41094	26621	27417	27429	46770	46770					0.02408268437852712
PIQIQSQNP	9	Unmodified	_PIQIQSQNP_					0	0	0			REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.7738037109375	2	512.774731	1023.53491	-0.67162	-0.00034439	-0.068281	-3.5013E-05	-0.7399	-0.0003794	512.7746013094767	45.184	0.69622	45.153	44.885	45.581	-0.031067					37	15	3	0	0	0	0.18338	3	3648	3638;3648;3660		77.318	15.21	1	598660	+		41095	26621	27417	27429	46771;46772;46773	46772					0.02408268437852712
PIQIQSQNP	9	Unmodified	_PIQIQSQNP_					0	0	0			REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.774169921875	2	512.774731	1023.53491	-0.58659	-0.00030079	-0.19121	-9.805E-05	-0.7778	-0.00039884	512.7745753480814	45.169	0.86986	45.165	44.837	45.706	-0.0041618					40	19	3	0	0	0	0.26953	3	3573	3563;3573;3586		67.494	12.717	1	686670	+		41096	26621	27417	27429	46774;46775;46776	46775					0.02408268437852712
PIQIQSQNP	9	Unmodified	_PIQIQSQNP_					0	0	0			REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.7754516601562	2	512.774731	1023.53491	-0.41052	-0.0002105	-0.58572	-0.00030034	-0.99624	-0.00051085	512.7745322883873	45.216	0.61684	45.228	44.942	45.559	0.012058					32	14	3	0	0	0	0.69624	1	3231	3231		40.778	0	1	362590	+		41097	26621	27417	27429	46777	46777					0.02408268437852712
PIQIQSQNP	9	Unmodified	_PIQIQSQNP_					0	0	0			REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.7743530273438	2	512.774731	1023.53491	0.31372	0.00016087	-0.8059	-0.00041325	-0.49219	-0.00025238	512.7742355656881	45.146	0.70348	45.192	44.903	45.606	0.046635					32	16	3	0	0	0	0.44421	2	3237	3226;3237		54.776	13.998	1	383840	+		41098	26621	27417	27429	46778;46779	46779					0.02408268437852712
PIQIQSQNP	9	Unmodified	_PIQIQSQNP_					0	0	0			REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	512.774731	1023.53491	-0.67162	-0.00034439	-0.068281	-3.5013E-05	-0.7399	-0.0003794	512.7746013094767	45.184	0.69622	45.153	44.885	45.581	-0.031067	0.042114	0.00029831	NaN	77.318	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	598660	+		41099	26621	27417	27429							0.02408268437852712
PIQIQSQNP	9	Unmodified	_PIQIQSQNP_					0	0	0			REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	REV__ENST00000431582.6_1_X:2527436-2533991:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	512.774731	1023.53491	-0.8852	-0.00045391	-1.0184	-0.00052222	-1.9036	-0.00097613	512.7740803823325	44.19	0.48011	45.035	44.82	45.3	0.84438	-0.076066	-0.00067611	NaN	77.318	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	805890	+		41100	26621	27417	27429							0.02408268437852712
PIQPHRRGQ	9	Unmodified	_PIQPHRRGQ_					0	0	0			REV__nc|ENSG00000107736|Q9H251-5|CDH23	REV__nc|ENSG00000107736|Q9H251-5|CDH23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.8089599609375	2	544.807231	1087.59991	-1.6224	-0.0008839	0.036189	1.9716E-05	-1.5862	-0.00086419	544.8072830574172	24.958	0.43481	24.958	24.631	25.066	0					27	19	2	0	0	0	0.74721	1	880	880		37.159	4.3467	1	37917	+		41101	29767	27418	27430	46780	46780					0.05961307754364498
PIRAAGER	8	Unmodified	_PIRAAGER_					0	0	0			REV__ENST00000375754.8_1_9:93658667-93658919:+|nuORF	REV__ENST00000375754.8_1_9:93658667-93658919:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25164794921875	2	435.251226	868.487899	-0.21094	-9.1811E-05	0.46031	0.00020035	0.24937	0.00010854	435.2513273926442	92.773	0.95985	93.223	92.818	93.778	0.44989					52	22	3	0	0	0	0.87922	1	11070	11070		31.955	0	1	401060	+		41102	25821	27419	27431	46781	46781					0.04839453677379879
PIRALTIETLW	11	Unmodified	_PIRALTIETLW_					0	0	0			REV__ENST00000505731.5_1_4:2937416-2940466:+|nuORF	REV__ENST00000505731.5_1_4:2937416-2940466:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2589416503906	3	438.258967	1311.75507	-0.3234	-0.00014173	-2.5085	-0.0010994	-2.8319	-0.0012411	438.2578505335394	31.282	0.78612	31.231	30.944	31.731	-0.051031					27	18	2	0	0	0	0.74771	1	1759	1759		22.562	1.7244	1	53179	+		41103	27887	27420	27432	46782	46782					0.11166494045414765
PIRASIARPA	10	Unmodified	_PIRASIARPA_					0	0	0			REV__ENST00000572151.1_1_17:78328611-78388856:-|nuORF	REV__ENST00000572151.1_1_17:78328611-78388856:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.32373046875	2	526.322183	1050.62981	0.45815	0.00024113	4.3609	0.0022953	4.8191	0.0025364	526.3243663512045	59.761	1.5451	59.877	59.01	60.555	0.1157					98	50	2	0	0	0	0.8651	1	5205	5205		25.574	0	1	175310	+		41104	28942	27421	27433	46783	46783					0.10652246699692114
PIREIHLEL	9	Unmodified	_PIREIHLEL_					0	0	0			REV__ENST00000581104.5_1_17:73208151-73231006:+|nuORF	REV__ENST00000581104.5_1_17:73208151-73231006:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3262329101562	2	560.329673	1118.64479	0.3478	0.00019488	-1.7298	-0.00096927	-1.382	-0.00077439	560.3276854300486	76.236	0.85418	76.361	75.84	76.694	0.12485					33	26	2	0	0	0	0.7932	1	7125	7125		26.693	0	1	90887	+		41105	29043	27422	27434	46784	46784					0.09021693777026485
PIREIHLEL	9	Unmodified	_PIREIHLEL_					0	0	0			REV__ENST00000581104.5_1_17:73208151-73231006:+|nuORF	REV__ENST00000581104.5_1_17:73208151-73231006:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	560.329673	1118.64479	0.3478	0.00019488	-1.7298	-0.00096927	-1.382	-0.00077439	560.3276854300486	76.236	0.85418	76.361	75.84	76.694	0.12485	-0.045555	-0.0007758	NaN	26.693	33	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90887	+		41106	29043	27422	27434							0.09021693777026485
PIREIHLEL	9	Unmodified	_PIREIHLEL_					0	0	0			REV__ENST00000581104.5_1_17:73208151-73231006:+|nuORF	REV__ENST00000581104.5_1_17:73208151-73231006:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	560.329673	1118.64479	-1.0044	-0.0005628	-0.46082	-0.00025821	-1.4652	-0.00082101	560.3283351618435	76.362	0.88351	76.452	75.932	76.816	0.089363	0.045555	0.00064632	NaN	26.693	39	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93574	+		41107	29043	27422	27434							0.09021693777026485
PIRKGSLV	8	Unmodified	_PIRKGSLV_					0	0	0			REV__ENSG00000006432|ENST00000554752|MAP3K9	REV__ENSG00000006432|ENST00000554752|MAP3K9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25018310546875	2	435.281995	868.549437	-1.6797	-0.00073113	0.027356	1.1907E-05	-1.6523	-0.00071922	435.28146953248245	83.845	0.21795	83.983	83.918	84.136	0.13811					7	4	2	0	0	0	0.4196	1	8101	8101		24.203	15.971	1	20377	+		41108	16101	27423	27435	46785	46785					0.10990385376658196
PIRKKLKIIPE	11	Unmodified	_PIRKKLKIIPE_					0	0	0		ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	445.6358947753906	3	445.634257	1333.88094	0.19586	8.7284E-05	3.4605	0.0015421	3.6564	0.0016294	445.6356257228967	39.482	1.6512	39.57	39.034	40.685	0.088375					153	46	5	0	0	0	0.79476	1	2431	2431		12.433	2.3289	1	2635800			41109	3165	27424	27436	46786	46786					0.22735625621476174
PIRKKLKIIPE	11	Unmodified	_PIRKKLKIIPE_					0	0	0		ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	445.63592529296875	3	445.634257	1333.88094	-0.069748	-3.1082E-05	3.7199	0.0016577	3.6502	0.0016266	445.6357324636982	39.577	1.516	39.529	38.941	40.457	-0.04789					145	45	5	0	0	0	0.81219	1	2425	2425		8.7993	2.7983	1	2616300			41110	3165	27424	27436	46787	46787					0.22735625621476174
PIRKKLKIIPE	11	Unmodified	_PIRKKLKIIPE_					0	0	0		ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.6361083984375	3	445.634257	1333.88094	-0.087691	-3.9078E-05	3.777	0.0016832	3.6894	0.0016441	445.6358753524641	36.614	1.1516	36.896	36.681	37.833	0.28173					135	27	6	0	0	0	0.81407	1	2924	2924		8.4073	1.7476	1	11171000			41111	3165	27424	27436	46788	46788					0.22735625621476174
PIRKKLKIIPE	11	Unmodified	_PIRKKLKIIPE_					0	0	0		ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.6360778808594	3	445.634257	1333.88094	0.20013	8.9183E-05	3.3385	0.0014877	3.5386	0.0015769	445.6356811098328	37.725	2.3674	38.23	37.766	40.133	0.50505					200	57	6	0	0	0	0.77205	8	3128	3057;3069;3080;3092;3104;3116;3128;3140		17.167	6.6366	1	16767000			41112	3165	27424	27436	46789;46790;46791;46792;46793;46794;46795;46796	46795					0.22735625621476174
PIRKKLKIIPE	11	Unmodified	_PIRKKLKIIPE_					0	0	0		ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	445.634257	1333.88094	-1.1459	-0.00051065	4.8847	0.0021768	3.7388	0.0016661	445.63637968085027	38.176	1.5244	38.126	37.673	39.197	-0.050373	-0.094194	0.00077327	NaN	17.167	155	34	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4285400			41113	3165	27424	27436							0.22735625621476174
PIRKKLKIIPE	11	Unmodified	_PIRKKLKIIPE_					0	0	0		ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	445.634257	1333.88094	-0.81295	-0.00036228	4.5503	0.0020278	3.7374	0.0016655	445.63619845135753	38.269	1.4517	38.28	37.812	39.264	0.011173	0.059987	0.00032628	NaN	17.167	148	33	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3428600			41114	3165	27424	27436							0.22735625621476174
PIRKKLKIIPE	11	Unmodified	_PIRKKLKIIPE_					0	0	0		ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	445.634257	1333.88094	-1.4341	-0.0006391	5.3359	0.0023779	3.9018	0.0017388	445.63652768366353	38.139	1.4708	38.156	37.733	39.204	0.016563	-0.064058	0.0013765	NaN	17.167	173	44	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3222500			41115	3165	27424	27436							0.22735625621476174
PIRKKLKIIPE	11	Unmodified	_PIRKKLKIIPE_					0	0	0		ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	445.634257	1333.88094	-0.63519	-0.00028306	4.155	0.0018516	3.5198	0.0015685	445.6360586466579	37.863	1.1296	38.176	37.864	38.994	0.31312	-0.044242	-0.00020223	NaN	17.167	138	28	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20399000			41116	3165	27424	27436							0.22735625621476174
PIRLLSSFV	9	Unmodified	_PIRLLSSFV_					0	0	0		nc|ENSG00000059122|Q4VC44-5|FLYWCH1;ENST00000570752.5_1_16:2986460-2998725:+|nuORF;ENST00000574985.1_1_16:2986529-2998725:+|nuORF	nc|ENSG00000059122|Q4VC44-5|FLYWCH1	nc|ENSG00000059122|Q4VC44-5|FLYWCH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3134765625	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.3064	-0.0011908	-3.8683	-0.0019972	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.77546	1	10629	10629		31.955	0	1	1268100			41117	13996	27425	27437	46797	46797					0.10343210236646883
PIRRLSDT	8	Unmodified	_PIRRLSDT_					0	0	0			REV__nc|ENSG00000135540|Q5SYE7|NHSL1	REV__nc|ENSG00000135540|Q5SYE7|NHSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.278076171875	2	479.277441	956.540328	2.2671	0.0010866	-1.7134	-0.0008212	0.55373	0.00026539	479.2765493533754	97.406	1.666	97.351	96.889	98.555	-0.055542					99	38	4	0	0	0	0.86677	1	10482	10482		27.882	2.3082	1	975730	+		41118	29866	27426	27438	46798	46798					0.06031992020314192
PIRRLSDT	8	Unmodified	_PIRRLSDT_					0	0	0			REV__nc|ENSG00000135540|Q5SYE7|NHSL1	REV__nc|ENSG00000135540|Q5SYE7|NHSL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2781066894531	2	479.277441	956.540328	-0.81003	-0.00038823	1.7076	0.00081842	0.89757	0.00043018	479.2781277040713	97.238	1.2623	97.469	96.955	98.217	0.23103					74	29	3	0	0	0	0.89962	1	10045	10045		38.806	6.8513	1	700460	+		41119	29866	27426	27438	46799	46799					0.06031992020314192
PIRVTVKTPKD	11	Unmodified	_PIRVTVKTPKD_					0	0	0		nc|ENSG00000160803|Q9NRR5-2|UBQLN4;ENSG00000160803|ENST00000368309|UBQLN4	nc|ENSG00000160803|Q9NRR5-2|UBQLN4	nc|ENSG00000160803|Q9NRR5-2|UBQLN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3853759765625	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.66929	6	12638	12638;12713;12738;12758;12920;12984		36.447	10.873	1	19815000			41120	5608	27427	27439	46800;46801;46802;46803;46804;46805	46800					0.13405609902633842
PIRVTVKTPKD	11	Unmodified	_PIRVTVKTPKD_					0	0	0		nc|ENSG00000160803|Q9NRR5-2|UBQLN4;ENSG00000160803|ENST00000368309|UBQLN4	nc|ENSG00000160803|Q9NRR5-2|UBQLN4	nc|ENSG00000160803|Q9NRR5-2|UBQLN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.8837280273438	2	627.382437	1252.75032	-1.2001	-0.00075294	0.60915	0.00038217	-0.59097	-0.00037077	627.3827611804128	112.09	1.416	112.07	111.56	112.98	-0.01989					130	45	4	0	0	0	0.7144	1	12006	12006		29.17	3.596	1	42384000			41121	5608	27427	27439	46806	46806					0.13405609902633842
PIRVTVKTPKD	11	Unmodified	_PIRVTVKTPKD_					0	0	0		nc|ENSG00000160803|Q9NRR5-2|UBQLN4;ENSG00000160803|ENST00000368309|UBQLN4	nc|ENSG00000160803|Q9NRR5-2|UBQLN4	nc|ENSG00000160803|Q9NRR5-2|UBQLN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3840942382812	2	627.382437	1252.75032	2.3056	0.0014465	-2.3879	-0.0014981	-0.082244	-5.1598E-05	627.3806379935313	112.21	0.77449	112.24	112.06	112.83	0.030594					92	29	4	0	0	0	0.68532	1	13563	13563		33.922	0	1	15506000			41122	5608	27427	27439	46807	46807					0.13405609902633842
PISASRPQK	9	Unmodified	_PISASRPQK_					0	0	0		ENST00000493892.5_1_1:26308955-26317251:-|nuORF	ENST00000493892.5_1_1:26308955-26317251:-|nuORF	ENST00000493892.5_1_1:26308955-26317251:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2860412597656	2	492.285266	982.555979	1.6804	0.00082722	1.7616	0.0008672	3.442	0.0016944	492.28670249740594	110.53	1.1679	110.59	110.07	111.24	0.054062					79	40	3	0	0	0	0.7932	1	13356	13356		25.574	1.3713	1	260830			41123	12740	27428	27440	46808	46808					0.06400278537375925
PISCRICVSY	10	Unmodified	_PISCRICVSY_					0	0	0		chr2:26402144-26407596|39|11.64|0.34|5.08|+|0|TE_info:MER49,MER49_dup152,ERV1,LTR,acceptor,+,26407596,26408136|DRC1,None|6	chr2:26402144-26407596|39|11.64|0.34|5.08|+|0|TE_info:MER49,MER49_dup152,ERV1,LTR,acceptor,+,26407596,26408136|DRC1,None|6	chr2:26402144-26407596|39|11.64|0.34|5.08|+|0|TE_info:MER49,MER49_dup152,ERV1,LTR,acceptor,+,26407596,26408136|DRC1,None|6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.779541015625	2	570.780644	1139.54674	1.1603	0.00066225	-1.7804	-0.0010162	-0.62011	-0.00035395	570.7794700070763	24.905	0.78845	24.868	24.536	25.325	-0.037178					40	18	3	0	0	0	0.8608	1	966	966		34.173	6.2903	1	146700			41124	330	27429	27441	46809	46809					-0.01745574134815797
PISIKIPD	8	Unmodified	_PISIKIPD_					0	0	0			REV__nc|ENSG00000089177|Q96L93-5|KIF16B	REV__nc|ENSG00000089177|Q96L93-5|KIF16B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7628479003906	2	441.768386	881.522219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.977	1	65.004	64.504	65.504	0.027138								0	0	0	0.29755	1	6147	6147		24.203	3.7209	1		+		41125	16964	27430	27442	46810	46810					0.07671857045602337
PISRFHCGVI	10	Unmodified	_PISRFHCGVI_					0	0	0			REV__ENSG00000164105|ENST00000296504|SAP30	REV__ENSG00000164105|ENST00000296504|SAP30	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.8037109375	2	564.802768	1127.59098	-0.50011	-0.00028246	1.8461	0.0010427	1.346	0.0007602	564.8037508575493	44.596	0.6071	45.441	45.184	45.791	0.84438					24	14	2	0	0	0	0.5766	1	4115	4115		51.335	5.3632	1	1508200	+		41126	21032	27431	27443	46811	46811					0.03229198073677253
PISRFHCGVI	10	Unmodified	_PISRFHCGVI_					0	0	0			REV__ENSG00000164105|ENST00000296504|SAP30	REV__ENSG00000164105|ENST00000296504|SAP30	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	564.802768	1127.59098	-0.31383	-0.00017725	1.821	0.0010285	1.5072	0.00085128	564.8037100378494	44.854	0.68915	45.317	44.906	45.595	0.46313	-0.061886	-1.5976E-05	NaN	51.335	40	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1385900	+		41127	21032	27431	27443							0.03229198073677253
PISRFHCGVI	10	Unmodified	_PISRFHCGVI_					0	0	0			REV__ENSG00000164105|ENST00000296504|SAP30	REV__ENSG00000164105|ENST00000296504|SAP30	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	564.802768	1127.59098	-0.50011	-0.00028246	1.8461	0.0010427	1.346	0.0007602	564.8037508575493	44.596	0.6071	45.441	45.184	45.791	0.84438	0.061886	1.2282E-05	NaN	51.335	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1508200	+		41128	21032	27431	27443							0.03229198073677253
PISRKWPL	8	Unmodified	_PISRKWPL_					0	0	0			REV__ENST00000538427.5_1_6:149663809-149663866:+|nuORF	REV__ENST00000538427.5_1_6:149663809-149663866:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.80078125	2	498.803094	995.591636	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.585	1	54.585	54.085	55.085	0								0	0	0	0.29498	1	4591	4591		26.796	1.3459	1		+		41129	28436	27432	27444	46812	46812					0.09366360785031702
PISVNKPD	8	Unmodified	_PISVNKPD_					0	0	0			REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2392578125	2	435.239993	868.465432	0.29815	0.00012977	0.0051889	2.2584E-06	0.30334	0.00013203	435.2398090871386	28.451	0.60146	28.473	28.102	28.704	0.021948					53	31	2	0	0	0	0.89494	1	1170	1170		37.159	1.5408	1	146160	+		41130	22941	27433	27445	46813	46813					0.025938094890875618
PITAHAEVEV	10	Unmodified	_PITAHAEVEV_					0	0	0		ENSG00000169118|ENST00000303052|CSNK1G1;ENST00000606225.1_1_15:64464132-64481629:-|nuORF	ENSG00000169118|ENST00000303052|CSNK1G1	ENSG00000169118|ENST00000303052|CSNK1G1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.2703247070312	2	533.282389	1064.55022	-0.2586	-0.0001379	2.3834	0.001271	2.1248	0.0011331	533.2834648027173	45.908	0.4325	45.879	45.497	45.929	-0.028782					16	9	2	0	0	0	0.37624	1	3749	3749		34.173	8.5985	1	53886			41131	6470	27434	27446	46814	46814					0.02053135235018999
PITAHAEVEV	10	Unmodified	_PITAHAEVEV_					0	0	0		ENSG00000169118|ENST00000303052|CSNK1G1;ENST00000606225.1_1_15:64464132-64481629:-|nuORF	ENSG00000169118|ENST00000303052|CSNK1G1	ENSG00000169118|ENST00000303052|CSNK1G1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	533.282389	1064.55022	0.13852	7.387E-05	3.6959	0.001971	3.8344	0.0020448	533.2844098682481	45.732	0.66807	45.728	45.361	46.029	-0.0041618	-0.075496	0.0010941	NaN	34.173	17	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50992			41132	6470	27434	27446							0.02053135235018999
PITASLFV	8	Unmodified	_PITASLFV_					0	0	0			REV__ENSG00000039123|ENST00000230640|MTREX	REV__ENSG00000039123|ENST00000230640|MTREX	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.3053894042969	2	424.249829	846.485105	-1.8168	-0.00077077	-4.1579	-0.001764	-5.9747	-0.0025348	424.24771679408605	41.19	0.54643	41.195	40.954	41.501	0.0043983					23	17	2	0	0	0	0.4196	1	2678	2678		15.636	0	1	136740	+		41133	16309	27435	27447	46815	46815					0.055721854998637355
PITILVPST	9	Unmodified	_PITILVPST_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	471.2912292480469	2	470.789318	939.564084	0.26544	0.00012497	2.2731	0.0010701	2.5385	0.0011951	470.7900478703474	44.332	1.0266	44.381	43.794	44.821	0.048996					40	24	2	0	0	0	0.47272	1	3121	3121		53.351	1.0523	1	109700			41134	5333	27436	27448	46816	46816					0.09188412734147278
PITILVPST	9	Unmodified	_PITILVPST_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	470.789318	939.564084	-1.7304	-0.00081466	3.3204	0.0015632	1.5899	0.00074853	470.79068793437676	44.094	1.0357	44.094	43.623	44.659	0	-0.19708	0.0006325	NaN	53.351	39	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50868			41135	5333	27436	27448							0.09188412734147278
PITILVPST	9	Unmodified	_PITILVPST_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	470.789318	939.564084	-0.97759	-0.00046024	2.3233	0.0010938	1.3457	0.00063353	470.79029044543614	44.335	1.1852	44.302	43.916	45.101	-0.033474	0.011101	-0.00030635	NaN	53.351	41	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87282			41136	5333	27436	27448							0.09188412734147278
PITILVPST	9	Unmodified	_PITILVPST_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	470.789318	939.564084	-1.2872	-0.000606	2.6482	0.0012468	1.361	0.00064077	470.7904662555656	44.259	1.28	44.256	43.778	45.058	-0.002449	-0.034351	-3.5362E-07	NaN	53.351	48	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	126510			41137	5333	27436	27448							0.09188412734147278
PITILVPST	9	Unmodified	_PITILVPST_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	470.789318	939.564084	-1.0332	-0.00048642	4.0214	0.0018932	2.9882	0.0014068	470.79070286389833	44.363	1.2308	44.371	43.923	45.154	0.0084534	0.080814	0.0012926	NaN	53.351	45	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73061			41138	5333	27436	27448							0.09188412734147278
PITLVCPCL	9	Unmodified	_PITLVCPCL_					0	0	0			REV__ENST00000398421.6_1_7:74197704-74202433:+|nuORF	REV__ENST00000398421.6_1_7:74197704-74202433:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.7576599121094	2	479.758649	957.502746	-0.80339	-0.00038543	0.70398	0.00033774	-0.099407	-4.7691E-05	479.75885725511523	75.87	0.74811	76.438	76.142	76.89	0.56836					36	17	3	0	0	0	0.72402	1	8633	8633		38.806	6.8513	1	564170	+		41139	26203	27437	27449	46817	46817					0.022294414388284167
PITLVPGK	8	Unmodified	_PITLVPGK_					0	0	0		ENST00000467287.5_1_1:151401965-151414680:-|nuORF	ENST00000467287.5_1_1:151401965-151414680:-|nuORF	ENST00000467287.5_1_1:151401965-151414680:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2676696777344	2	412.765646	823.516739	-0.21056	-8.6912E-05	2.569	0.0010604	2.3584	0.00097348	412.76685422643334	40.116	1.6377	40.068	39.082	40.719	-0.04789					115	51	3	0	0	0	0.84341	1	2390	2390		24.203	2.5004	1	699640			41140	12155	27438	27450	46818	46818					0.0979217825380374
PIVAKTVAM	9	Unmodified	_PIVAKTVAM_					0	0	0			REV__ENST00000548440.1_1_2:160182413-160189208:-|nuORF	REV__ENST00000548440.1_1_2:160182413-160189208:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.2799377441406	2	465.278063	928.541574	1.2805	0.00059581	2.916	0.0013568	4.1966	0.0019526	465.27931677409214	88.976	2.3969	88.903	88.477	90.874	-0.07238					118	56	4	0	0	0	0.78058	1	9258	9258		30.504	0	1	1648000	+		41141	27303	27439	27451	46819	46819					0.07444490064870024
PIVHIHKP	8	Unmodified	_PIVHIHKP_					0	0	0			REV__ENST00000457685.6_1_20:45141455-45141713:-|nuORF	REV__ENST00000457685.6_1_20:45141455-45141713:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7888488769531	2	470.789987	939.565421	-1.7868	-0.00084119	1.6107	0.00075828	-0.1761	-8.2908E-05	470.7906139736521	40.476	1.2312	40.476	39.584	40.815	0					64	34	2	0	0	0	0.86791	1	2663	2663		28.254	0	1	120330	+		41142	26973	27440	27452	46820	46820					0.09322091613557859
PIVKMFEDPE	10	Unmodified	_PIVKMFEDPE_					0	0	0		ENST00000518442.5_1_8:109247181-109261015:-|nuORF;ENSG00000104408|ENST00000220849|EIF3E;chr8:108241913-108268246|54|11.59|0.63|4.21|-|ENST00000678797|EIF3E,EIF3E	ENST00000518442.5_1_8:109247181-109261015:-|nuORF	ENST00000518442.5_1_8:109247181-109261015:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	602.80126953125	2	602.799557	1203.58456	0.97328	0.00058669	1.7006	0.0010251	2.6739	0.0016118	602.8004011190249	72.823	0.83628	72.952	72.522	73.358	0.12921					70	29	3	0	0	0	0.5766	1	6679	6679		51.335	0	1	532890			41143	509	27441	27453	46821	46821					-0.009087846683314638
PIVLDKAI	8	Unmodified	_PIVLDKAI_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7784118652344	2	434.778754	867.542954	-0.72462	-0.00031505	3.8898	0.0016912	3.1652	0.0013761	434.78037611122505	35.149	1.2526	35.093	34.81	36.063	-0.056381					100	28	4	0	0	0	0.884	1	2369	2369		33.516	6.7195	1	2671400	+		41144	20437;29946	27442	27454	46822	46822					0.10388447425270897
PIVPHVKTAA	10	Unmodified	_PIVPHVKTAA_					0	0	0			REV__nc|ENSG00000104133|Q96JI7-2|SPG11	REV__nc|ENSG00000104133|Q96JI7-2|SPG11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.8135375976562	2	516.813659	1031.61277	2.4602	0.0012715	0.76586	0.00039581	3.2261	0.0016673	516.814554953342	114.11	0.1767	114.13	114.04	114.22	0.020027					9	8	2	0	0	0	0.86718	1	13778	13778		27.882	5.9224	1	70913	+		41145	17438	27443	27455	46823	46823					0.09822326093899392
PIVPPSLKAL	10	Unmodified	_PIVPPSLKAL_					0	0	0			REV__ENSG00000079337|ENST00000449771|RAPGEF3	REV__ENSG00000079337|ENST00000449771|RAPGEF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.2506713867188	2	517.83406	1033.65357	1.044	0.00054063	-1.1207	-0.00058032	-0.076642	-3.9688E-05	517.832458418999	33.876	0.16613	34.046	33.943	34.109	0.16971					5	3	2	0	0	0	0.37624	1	2459	2459		17.365	9.6747	1	31624	+		41146	16781	27444	27456	46824	46824					0.13808667413536568
PIVPRGGGVRP	11	Unmodified	_PIVPRGGGVRP_					0	0	0			REV__ENST00000393952.3_3_11:66624633-66624750:+|nuORF	REV__ENST00000393952.3_3_11:66624633-66624750:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8336791992188	2	552.835457	1103.65636	0.70436	0.0003894	-3.555	-0.0019653	-2.8507	-0.0015759	552.8335720406732	83.834	1.6836	83.982	83.396	85.079	0.14789					58	38	2	0	0	0	0.69995	1	8101	8101		31.53	1.0262	1	196450	+		41147	26071	27445	27457	46825	46825					0.10867935591022615
PIVQKARRAI	10	Unmodified	_PIVQKARRAI_					0	0	0		nc|ENSG00000121988|Q5FWF4-3|ZRANB3;ENSG00000121988|ENST00000264159|ZRANB3;nc|ENSG00000121988|Q5FWF4-5|ZRANB3	nc|ENSG00000121988|Q5FWF4-3|ZRANB3	nc|ENSG00000121988|Q5FWF4-3|ZRANB3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.2879028320312	2	576.372207	1150.72986	-0.43785	-0.00025236	-4.2767	-0.002465	-4.7146	-0.0027173	576.3691713201172	68.847	0.13496	68.88	68.779	68.913	0.033005					5	3	2	0	0	0	0.37624	1	6585	6585		11.511	0	1	30509			41148	3204	27446	27458	46826	46826					0.16052484033502878
PIVSKLPRPSA	11	Unmodified	_PIVSKLPRPSA_					0	0	0			REV__ENSG00000134323|ENST00000281043|MYCN	REV__ENSG00000134323|ENST00000281043|MYCN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.8585815429688	2	582.858598	1163.70264	-0.28183	-0.00016427	1.1948	0.00069638	0.91294	0.00053212	582.859187091666	109.27	0.26681	109.27	109.16	109.43	0					28	13	3	0	0	0	0.75164	1	11360	11360		21.686	0.73882	1	3453900	+		41149	19134	27447	27459	46827	46827					0.12733955702469757
PIVSKLPRPSA	11	Unmodified	_PIVSKLPRPSA_					0	0	0			REV__ENSG00000134323|ENST00000281043|MYCN	REV__ENSG00000134323|ENST00000281043|MYCN	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	582.858598	1163.70264	-0.83043	-0.00048403	1.6732	0.00097525	0.84278	0.00049122	582.8594470867313	109.42	0.19504	109.37	109.25	109.45	-0.049324	0.021467	0.00064549	NaN	21.686	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1114200	+		41150	19134	27447	27459							0.12733955702469757
PIVSKLPRPSA	11	Unmodified	_PIVSKLPRPSA_					0	0	0			REV__ENSG00000134323|ENST00000281043|MYCN	REV__ENSG00000134323|ENST00000281043|MYCN	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	582.858598	1163.70264	0.8834	0.0005149	0.48103	0.00028037	1.3644	0.00079527	582.8590610555063	109.29	0.1339	109.36	109.29	109.43	0.078552	0.014853	-0.00074426	NaN	21.686	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	444580	+		41151	19134	27447	27459							0.12733955702469757
PIVSKLPRPSA	11	Unmodified	_PIVSKLPRPSA_					0	0	0			REV__ENSG00000134323|ENST00000281043|MYCN	REV__ENSG00000134323|ENST00000281043|MYCN	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	582.858598	1163.70264	-1.3452	-0.00078408	2.4278	0.0014151	1.0826	0.00063099	582.8599575958705	109.35	0.19316	109.36	109.22	109.42	0.0060425	0.011404	0.0015251	NaN	21.686	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	573040	+		41152	19134	27447	27459							0.12733955702469757
PIWAASPFV	9	Unmodified	_PIWAASPFV_					0	0	0			REV__ENST00000355327.7_2_15:71389306-71507474:+|nuORF	REV__ENST00000355327.7_2_15:71389306-71507474:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.30078125	2	494.268553	986.522553	-1.6336	-0.00080746	0.52462	0.00025931	-1.109	-0.00054815	494.26834260902814	97.299	0.67882	97.501	97.394	98.073	0.20206					26	15	2	0	0	0	0.20789	1	10022	10022		42.474	23.114	1	77519	+		41153	25375	27448	27460	46828	46828					0.028752767654737
PIWGEECQCQL	11	Unmodified	_PIWGEECQCQL_					0	0	0			REV__ENSG00000042980|ENST00000265769|ADAM28	REV__ENSG00000042980|ENST00000265769|ADAM28	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.86456298828125	3	435.858258	1304.55294	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.62	1	115.68	115.18	116.18	0.05954								0	0	0	0.56276	1	12312	12312		13.508	0	1		+		41154	16332	27449	27461	46829	46829					-0.08715100693939348
PIWKLEKKQVE	11	Unmodified	_PIWKLEKKQVE_					0	0	0		ENSG00000135912|ENST00000392102|TTLL4	ENSG00000135912|ENST00000392102|TTLL4	ENSG00000135912|ENST00000392102|TTLL4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.6082763671875	3	466.609889	1396.80784	-0.93039	-0.00043413	-3.2573	-0.0015199	-4.1877	-0.001954	466.6082212965859	101	2.1787	101	99.472	101.65	0					144	51	4	0	0	0	0.80373	1	10212	10212		10.562	0.45799	1	331070			41155	4063	27450	27462	46830	46830					0.12530452108194368
PIWRQQEHGEK	11	Unmodified	_PIWRQQEHGEK_					0	0	0		chr6:132954517-132980899|30|19.5|0.0|20.9|+|2|LINC00326,LINC00326|2	chr6:132954517-132980899|30|19.5|0.0|20.9|+|2|LINC00326,LINC00326|2	chr6:132954517-132980899|30|19.5|0.0|20.9|+|2|LINC00326,LINC00326|2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	469.5760192871094	3	469.909109	1406.7055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.656	1	20.586	20.086	21.086	-0.069735								0	0	0	0.56276	1	552	552		23.378	6.2112	1				41156	467	27451	27463	46831	46831					0.01841179089342404
PIYRPVLN	8	Unmodified	_PIYRPVLN_					0	0	0			REV__ENSG00000116906|ENST00000366647|GNPAT	REV__ENSG00000116906|ENST00000366647|GNPAT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.8132629394531	2	486.287277	970.560001	0.10836	5.2693E-05	2.3653	0.0011502	2.4736	0.0012029	486.28873465355207	32.878	0.7239	33.047	32.59	33.314	0.16971					34	16	3	0	0	0	0.4196	1	2275	2275		33.516	12.569	1	130920	+		41157	18233	27452	27464	46832	46832					0.07354368031087688
PKAAELKLKQ	10	Unmodified	_PKAAELKLKQ_					0	0	0		ENST00000254878.7_1_8:99115104-99118201:-|nuORF	ENST00000254878.7_1_8:99115104-99118201:-|nuORF	ENST00000254878.7_1_8:99115104-99118201:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.351806640625	2	563.353148	1124.69174	-1.2875	-0.00072533	-2.3785	-0.0013399	-3.666	-0.0020653	563.3516423395747	95.964	0.97999	96.03	95.589	96.569	0.06591					44	22	2	0	0	0	0.86587	1	10081	10081		29.17	1.0886	1	304430			41158	9325	27453	27465	46833	46833					0.13438553328160197
PKAAGQAEL	9	Unmodified	_PKAAGQAEL_					0	0	0		nc|ENSG00000136521|O43674-2|NDUFB5	nc|ENSG00000136521|O43674-2|NDUFB5	nc|ENSG00000136521|O43674-2|NDUFB5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.7449645996094	2	442.745442	883.476331	1.3194	0.00058415	-2.5186	-0.0011151	-1.1992	-0.00053095	442.74418253682444	89.898	0.78091	89.828	89.395	90.175	-0.069977					47	17	4	0	0	0	0.78536	1	9402	9402		29.15	1.2673	1	760840			41159	14939	27454	27466	46834	46834					0.029932118633610116
PKAAIKRHW	9	Unmodified	_PKAAIKRHW_					0	0	0		nc|ENSG00000064995|Q15544-2|TAF11	nc|ENSG00000064995|Q15544-2|TAF11	nc|ENSG00000064995|Q15544-2|TAF11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.3319702148438	2	553.832717	1105.65088	-0.64284	-0.00035603	-4.1664	-0.0023075	-4.8092	-0.0026635	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.78058	1	8374	8374		30.504	2.6214	1	1181400			41160	14762	27455	27467	46835	46835					0.10228256799223345
PKAAKKVK	8	Unmodified	_PKAAKKVK_					0	0	0			REV__ENSG00000184897|ENST00000333762|H1-10	REV__ENSG00000184897|ENST00000333762|H1-10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3001403808594	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.83646	1	7052	7052		12.207	0	1	1921500	+		41161	22708	27456	27468	46836	46836					0.14627262273359065
PKAAKKVK	8	Unmodified	_PKAAKKVK_					0	0	0			REV__ENSG00000184897|ENST00000333762|H1-10	REV__ENSG00000184897|ENST00000333762|H1-10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2997131347656	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.7961	1	7569	7569		17.365	4.4058	1	6323600	+		41162	22708	27456	27468	46837	46837					0.14627262273359065
PKAIKILE	8	Unmodified	_PKAIKILE_					0	0	0		L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|18|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|18|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|18|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30126953125	2	456.299853	910.585153	-1.267	-0.00057813	4.2907	0.0019578	3.0237	0.0013797	456.3016565043114	33.346	1.5471	33.392	33.095	34.642	0.045853					160	67	4	0	0	0	0.79929	1	1673	1673		18.324	1.6194	1	1558600			41163	14638	27457	27469	46838	46838					0.12628422833643071
PKAKIPKV	8	Unmodified	_PKAKIPKV_					0	0	0			REV__nc|ENSG00000171533|Q96JE9-2|MAP6	REV__nc|ENSG00000171533|Q96JE9-2|MAP6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.802001953125	2	440.802563	879.590573	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.642	1	21.199	20.699	21.699	-0.44324								0	0	0	0.30976	1	802	802		12.959	0.75233	1		+		41164	21746	27458	27470	46839	46839					0.1459614641613598
PKAKPKKKKKP	11	Unmodified	_PKAKPKKKKKP_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3030700683594	3	426.630847	1276.87071	-0.25013	-0.00010671	0.58151	0.00024809	0.33138	0.00014138	426.6310463743283	83.359	1.0839	83.79	83.253	84.337	0.43108					46	25	2	0	0	0	0.18258	1	9622	9622		5.4129	2.5611	1	768690			41165	1487	27459	27471	46840	46840					0.24335062686918718
PKAKPKKKKKP	11	Unmodified	_PKAKPKKKKKP_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	426.630847	1276.87071	-0.18199	-7.7642E-05	0.50703	0.00021631	0.32504	0.00013867	426.63103830246325	83.626	1.3356	83.693	82.955	84.29	0.066727	-0.1742	0.00017044	NaN	5.4129	44	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120550			41166	1487	27459	27471							0.24335062686918718
PKAKPKKKKKP	11	Unmodified	_PKAKPKKKKKP_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	426.630847	1276.87071	0.6191	0.00026413	-0.39593	-0.00016892	0.22317	9.5213E-05	426.63060732017516	83.897	1.0902	83.828	83.367	84.458	-0.069313	-0.038885	-0.00098525	NaN	5.4129	38	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108420			41167	1487	27459	27471							0.24335062686918718
PKAKPKKKKKP	11	Unmodified	_PKAKPKKKKKP_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	426.630847	1276.87071	2.3458	0.0010008	-2.2215	-0.00094775	0.12427	5.3018E-05	426.6297775172442	83.751	1.0484	83.81	83.323	84.371	0.059258	-0.056555	-0.0033218	NaN	5.4129	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67494			41168	1487	27459	27471							0.24335062686918718
PKAKPKKKKKP	11	Unmodified	_PKAKPKKKKKP_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	426.630847	1276.87071	-1.7052	-0.00072751	2.1333	0.00091012	0.42804	0.00018262	426.63174054994505	83.749	1.0296	83.914	83.276	84.306	0.1651	0.047009	0.0022519	NaN	5.4129	37	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93933			41169	1487	27459	27471							0.24335062686918718
PKAKPKKKKKP	11	Unmodified	_PKAKPKKKKKP_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	426.630847	1276.87071	0.58215	0.00024836	-0.19463	-8.3034E-05	0.38752	0.00016533	426.6307505464493	83.942	0.98985	84.09	83.57	84.56	0.14793	0.22315	-0.00072761	NaN	5.4129	38	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110480			41170	1487	27459	27471							0.24335062686918718
PKAKPKKKKKP	11	Unmodified	_PKAKPKKKKKP_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	426.630847	1276.87071	-1.7134	-0.00073098	1.7716	0.00075581	0.058205	2.4832E-05	426.63158268408057	83.805	1.0865	83.943	83.395	84.481	0.13811	0.076595	0.0017889	NaN	5.4129	36	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87158			41171	1487	27459	27471							0.24335062686918718
PKALGKMK	8	Unmodified	_PKALGKMK_					0	0	0			REV__ENSG00000074590|ENST00000261402|NUAK1	REV__ENSG00000074590|ENST00000261402|NUAK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.7732238769531	2	436.772948	871.531344	-1.6314	-0.00071254	3.3462	0.0014616	1.7149	0.00074901	436.7743489325011	26.574	0.4584	26.641	26.356	26.815	0.066877					33	21	2	0	0	0	0.82658	1	1018	1018		21.96	2.5999	1	119400	+		41172	16692	27460	27472	46841	46841					0.0904392713028983
PKALGKMK	8	Unmodified	_PKALGKMK_					0	0	0			REV__ENSG00000074590|ENST00000261402|NUAK1	REV__ENSG00000074590|ENST00000261402|NUAK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.77325439453125	2	436.772948	871.531344	0.36031	0.00015737	1.5614	0.00068196	1.9217	0.00083933	436.77349327524536	26.738	0.89724	26.766	26.451	27.349	0.028172					66	41	2	0	0	0	0.83646	1	1030	1030		12.207	3.3845	1	200440	+		41173	16692	27460	27472	46842	46842					0.0904392713028983
PKALVVIR	8	Unmodified	_PKALVVIR_					0	0	0			REV__nc|ENSG00000168918|Q92835-3|INPP5D	REV__nc|ENSG00000168918|Q92835-3|INPP5D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.30645751953125	2	448.308013	894.601472	-0.042137	-1.8891E-05	-3.1723	-0.0014222	-3.2144	-0.001441	448.3065149989359	23.401	2.3628	23.019	21.475	23.837	-0.38178					107	54	3	0	0	0	0.79929	1	1021	1021		18.324	3.6603	1	386980	+		41174	21533	27461	27473	46843	46843					0.1499554879040943
PKALVVIR	8	Unmodified	_PKALVVIR_					0	0	0			REV__nc|ENSG00000168918|Q92835-3|INPP5D	REV__nc|ENSG00000168918|Q92835-3|INPP5D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3065185546875	2	448.308013	894.601472	0.077631	3.4803E-05	-2.7409	-0.0012288	-2.6633	-0.001194	448.3066399398086	21.099	1.9391	20.47	19.445	21.384	-0.62835					82	47	2	0	0	0	0.80706	1	723	723		19.36	1.0356	1	244290	+		41175	21533	27461	27473	46844	46844					0.1499554879040943
PKANQNLSN	9	Unmodified	_PKANQNLSN_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.257568359375	2	493.256705	984.498858	-0.07703	-3.7996E-05	0.10988	5.4197E-05	0.032846	1.6202E-05	493.2567066959504	88.207	3.6329	88.275	86.579	90.212	0.068016					183	84	3	0	0	0	0.71772	1	8947	8947		39.253	2.0937	1	222990	+		41176	18022	27462	27474	46845	46845					0.005988112609884411
PKANQNLSN	9	Unmodified	_PKANQNLSN_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	493.256705	984.498858	-0.96884	-0.00047789	0.98026	0.00048352	0.011418	5.6321E-06	493.2571278308095	88.036	3.1356	88.036	86.951	90.087	0	-0.12399	0.00073193	NaN	39.253	169	72	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	193640	+		41177	18022	27462	27474							0.005988112609884411
PKANQNLSN	9	Unmodified	_PKANQNLSN_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	493.256705	984.498858	-0.07703	-3.7996E-05	0.10988	5.4197E-05	0.032846	1.6202E-05	493.2567066959504	88.207	3.6329	88.275	86.579	90.212	0.068016	0.11452	-0.00012671	NaN	39.253	183	84	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	222990	+		41178	18022	27462	27474							0.005988112609884411
PKANQNLSN	9	Unmodified	_PKANQNLSN_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	493.256705	984.498858	1.2513	0.00061721	-1.1872	-0.0005856	0.064088	3.1612E-05	493.2560497436079	88.081	3.2684	88.007	86.903	90.171	-0.074005	-0.15378	-0.0014063	NaN	39.253	179	76	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	307510	+		41179	18022	27462	27474							0.005988112609884411
PKANQNLSN	9	Unmodified	_PKANQNLSN_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	493.256705	984.498858	-0.85808	-0.00042325	0.89633	0.00044212	0.038257	1.8871E-05	493.2571047442486	87.852	3.5326	87.905	86.693	90.226	0.053032	-0.25502	0.00064914	NaN	39.253	184	82	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	264810	+		41180	18022	27462	27474							0.005988112609884411
PKANQNLSN	9	Unmodified	_PKANQNLSN_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	493.256705	984.498858	-0.61994	-0.00030579	0.57495	0.0002836	-0.044991	-2.2192E-05	493.2569121575583	88.125	3.1739	88.326	86.898	90.072	0.20115	0.16534	0.00033209	NaN	39.253	182	74	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	290830	+		41181	18022	27462	27474							0.005988112609884411
PKANQNLSN	9	Unmodified	_PKANQNLSN_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	493.256705	984.498858	0.68337	0.00033708	-0.71836	-0.00035433	-0.034985	-1.7256E-05	493.2562610655838	88.128	3.429	88.279	86.785	90.214	0.15055	0.11816	-0.00094377	NaN	39.253	172	80	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	274290	+		41182	18022	27462	27474							0.005988112609884411
PKANQNLSN	9	Unmodified	_PKANQNLSN_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	493.256705	984.498858	-1.6306	-0.00080431	1.5946	0.00078654	-0.036018	-1.7766E-05	493.2574139844557	88.126	3.7143	88.295	86.278	89.992	0.16923	0.13476	0.001338	NaN	39.253	178	86	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	264820	+		41183	18022	27462	27474							0.005988112609884411
PKAVAFIH	8	Unmodified	_PKAVAFIH_					0	0	0		ENSG00000099904|ENST00000334554|ZDHHC8;nc|ENSG00000099904|Q9ULC8-2|ZDHHC8;nc|ENSG00000099904|Q9ULC8-3|ZDHHC8	ENSG00000099904|ENST00000334554|ZDHHC8	ENSG00000099904|ENST00000334554|ZDHHC8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7876281738281	2	441.763438	881.512323	0.25362	0.00011204	1.1998	0.00053001	1.4534	0.00064205	441.76462202612714	41.839	0.24476	41.808	41.583	41.828	-0.030991					7	5	2	0	0	0	0.4196	1	3060	3060		21.702	12.88	1	73605			41184	1776	27463	27475	46846	46846					0.06682713830889497
PKAVAKKK	8	Unmodified	_PKAVAKKK_					0	0	0		ENST00000301998.4_1_2:62449407-62449476:+|nuORF	ENST00000301998.4_1_2:62449407-62449476:+|nuORF	ENST00000301998.4_1_2:62449407-62449476:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2999267578125	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.79929	1	8610	8610		18.324	5.3652	1	5485100			41185	9814	27464	27476	46847	46847					0.14627262273359065
PKAVAKKK	8	Unmodified	_PKAVAKKK_					0	0	0		ENST00000301998.4_1_2:62449407-62449476:+|nuORF	ENST00000301998.4_1_2:62449407-62449476:+|nuORF	ENST00000301998.4_1_2:62449407-62449476:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.300048828125	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.80706	1	7582	7582		19.36	0	1	6323600			41186	9814	27464	27476	46848	46848					0.14627262273359065
PKAVKAKK	8	Unmodified	_PKAVKAKK_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3001708984375	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.83058	4	6517	6517;6563;6673;6687		12.959	4.1369	1	1072400	+		41187	22956	27465	27477	46849;46850;46851;46852	46849					0.14627262273359065
PKAVKAKK	8	Unmodified	_PKAVKAKK_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.30023193359375	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.79929	8	7156	6786;6955;7003;7009;7149;7156;7164;7171		26.796	1.0356	1	1680500	+		41188	22956	27465	27477	46853;46854;46855;46856;46857;46858;46859;46860	46858					0.14627262273359065
PKAVKAKK	8	Unmodified	_PKAVKAKK_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3003234863281	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.83058	1	7004	7004		12.959	0	1	1702600	+		41189	22956	27465	27477	46861	46861					0.14627262273359065
PKAVKAKK	8	Unmodified	_PKAVKAKK_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2998046875	2	435.300188	868.585822	-0.33292	-0.00014492	0.65367	0.00028454	0.32075	0.00013962	435.30030600334584	75.563	1.7203	75.517	74.991	76.711	-0.045975					102	48	3	0	0	0	0.83646	1	7475	7475		12.207	3.3845	1	492420	+		41190	22956	27465	27477	46862	46862					0.14627262273359065
PKAVKAKK	8	Unmodified	_PKAVKAKK_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3003234863281	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.86906	1	7023	7023		8.2313	0	1	1921500	+		41191	22956	27465	27477	46863	46863					0.14627262273359065
PKAVKAKK	8	Unmodified	_PKAVKAKK_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.30035400390625	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.79929	13	6739	6619;6627;6636;6704;6739;6767;6788;6858;6866;6911;6957;6977;7022		25.45	5.8177	1	2081500	+		41192	22956	27465	27477	46864;46865;46866;46867;46868;46869;46870;46871;46872;46873;46874;46875;46876	46868					0.14627262273359065
PKAVKAKK	8	Unmodified	_PKAVKAKK_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.30029296875	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.83058	1	6658	6658		12.959	0	1	1819800	+		41193	22956	27465	27477	46877	46877					0.14627262273359065
PKAVKAKK	8	Unmodified	_PKAVKAKK_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.30035400390625	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.79929	2	6731	6584;6731		18.324	0	1	1852500	+		41194	22956	27465	27477	46878;46879	46879					0.14627262273359065
PKAVKAKK	8	Unmodified	_PKAVKAKK_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2999572753906	2	435.300188	868.585822	-1.3785	-0.00060007	1.5278	0.00066505	0.14927	6.4979E-05	435.30073733409733	75.396	1.3729	75.483	74.943	76.316	0.087639					63	36	2	0	0	0	0.83058	1	6958	6958		12.959	0	1	527430	+		41195	22956	27465	27477	46880	46880					0.14627262273359065
PKAVKAKK	8	Unmodified	_PKAVKAKK_					0	0	0			REV__ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2998352050781	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.79929	5	8538	8173;8321;8368;8521;8538		19.36	4.6959	1	5485100	+		41196	22956	27465	27477	46881;46882;46883;46884;46885	46885					0.14627262273359065
PKAYATLILDS	11	Unmodified	_PKAYATLILDS_					0	0	0		ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3330078125	2	596.334621	1190.65469	-0.57959	-0.00034563	-2.3011	-0.0013722	-2.8807	-0.0017178	596.3331084008277	96.35	3.5496	96.416	95.306	98.855	0.06591					255	82	4	0	0	0	0.67778	1	10163	10163		35.152	5.982	1	1242500			41197	5146	27466	27478	46886	46886					0.06698836991768076
PKAYATLILDS	11	Unmodified	_PKAYATLILDS_					0	0	0		ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.33349609375	2	596.334621	1190.65469	-1.3013	-0.00077598	-1.6351	-0.00097509	-2.9364	-0.0017511	596.3335316328556	96.129	3.5172	96.331	95.353	98.87	0.20242					227	81	4	0	0	0	0.53361	1	9990	9990		49.536	8.7579	1	1353000			41198	5146	27466	27478	46887	46887					0.06698836991768076
PKCAPGVGLV	10	Unmodified	_PKCAPGVGLV_					0	0	0		ENSG00000142871|ENST00000451137|CCN1	ENSG00000142871|ENST00000451137|CCN1	ENSG00000142871|ENST00000451137|CCN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	471.2684631347656	2	470.767863	939.521173	-1.9239	-0.00090572	-1.5922	-0.00074958	-3.5162	-0.0016553	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.86201	1	1511	1511		24.203	2.5004	1	93177			41199	4586	27467	27479	46888	46888					0.048993194050581224
PKCPPEDVP	9	Unmodified	_PKCPPEDVP_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.2388000488281	2	491.239135	980.463718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.848	1	18.922	18.422	19.422	0.073465								0	0	0	0.32469	1	335	335		21.96	0.25755	1				41200	7747	27468	27480	46889	46889					-0.027295675911773287
PKDAIRALKKR	11	Unmodified	_PKDAIRALKKR_					0	0	0		ENST00000537091.2_1_17:17772601-17875627:-|nuORF;nc|ENSG00000175662|Q6ZVM7-2|TOM1L2;nc|ENSG00000175662|Q6ZVM7-3|TOM1L2;nc|ENSG00000175662|Q6ZVM7-5|TOM1L2;ENSG00000175662|ENST00000379504|TOM1L2	ENST00000537091.2_1_17:17772601-17875627:-|nuORF	ENST00000537091.2_1_17:17772601-17875627:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	433.2552490234375	3	432.613856	1294.81974	-0.96166	-0.00041603	1.7082	0.000739	0.74655	0.00032297	432.6144572685318	107.22	0.26215	107.22	106.98	107.24	0					9	5	2	0	0	0	0.17387	1	11125	11125		21.032	16.146	1	33578			41201	7029	27469	27481	46890	46890					0.18412113642057193
PKDAIRALKKR	11	Unmodified	_PKDAIRALKKR_					0	0	0		ENST00000537091.2_1_17:17772601-17875627:-|nuORF;nc|ENSG00000175662|Q6ZVM7-2|TOM1L2;nc|ENSG00000175662|Q6ZVM7-3|TOM1L2;nc|ENSG00000175662|Q6ZVM7-5|TOM1L2;ENSG00000175662|ENST00000379504|TOM1L2	ENST00000537091.2_1_17:17772601-17875627:-|nuORF	ENST00000537091.2_1_17:17772601-17875627:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.25506591796875	3	432.613856	1294.81974	-1.8324	-0.00079274	-2.6472	-0.0011452	-4.4796	-0.001938	432.6126638399656	107.04	0.39188	107.1	107	107.39	0.053757					12	9	2	0	0	0	0.17245	1	11403	11403		7.6794	0	1	102290			41202	7029	27469	27481	46891	46891					0.18412113642057193
PKDKAIKKFII	11	Unmodified	_PKDKAIKKFII_					0	0	0		ENST00000480579.2_1_8:119774141-119774438:-|nuORF	ENST00000480579.2_1_8:119774141-119774438:-|nuORF	ENST00000480579.2_1_8:119774141-119774438:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25152587890625	3	434.283224	1299.82784	0.29907	0.00012988	-1.3725	-0.00059607	-1.0735	-0.00046619	434.2838494874091	80.628	0.24986	81.155	81.035	81.285	0.52676					6	5	2	0	0	0	0.17729	1	9286	9286		12.957	0	1	17535			41203	12442	27470	27482	46892	46892					0.18992247838832554
PKDPRLGP	8	Unmodified	_PKDPRLGP_					0	0	0			REV__ENSG00000136367|ENST00000419474|ZFHX2	REV__ENSG00000136367|ENST00000419474|ZFHX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2556457519531	2	440.255977	878.497401	0.14193	6.2485E-05	-1.4822	-0.00065253	-1.3402	-0.00059005	440.25513727144596	71.719	1.1559	72.269	71.825	72.981	0.55009					55	27	3	0	0	0	0.884	1	8044	8044		33.516	3.0119	1	507320	+		41204	19304	27471	27483	46893	46893					0.05329221962892916
PKDVDLSQPRK	11	Unmodified	_PKDVDLSQPRK_					0	0	0		ENSG00000160224|ENST00000291582|AIRE	ENSG00000160224|ENST00000291582|AIRE	ENSG00000160224|ENST00000291582|AIRE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3619384765625	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.66929	1	12416	12416		36.447	0	1	27133000			41205	5571	27472	27484	46894	46894					0.07451545000526494
PKEETHIRKH	10	Unmodified	_PKEETHIRKH_					0	0	0			REV__ENSG00000197013|ENST00000358491|ZNF429	REV__ENSG00000197013|ENST00000358491|ZNF429	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7748718261719	3	425.570316	1273.68912	0.39395	0.00016765	-0.15314	-6.5172E-05	0.24081	0.00010248	426.2406317818643	37.695	0.4117	38.181	37.947	38.359	0.48581					21	10	3	0	0	0	0.37624	1	3055	3055		14.086	0	1	172020	+		41206	23186	27473	27485	46895	46895					0.06322097923225556
PKEETVNDF	9	Unmodified	_PKEETVNDF_					0	0	0		nc|ENSG00000132670|P18433-6|PTPRA;ENSG00000132670|ENST00000399903|PTPRA	nc|ENSG00000132670|P18433-6|PTPRA	nc|ENSG00000132670|P18433-6|PTPRA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.3587036132812	2	539.756204	1077.49785	-0.11857	-6.3999E-05	3.8752	0.0020917	3.7566	0.0020277	540.2603751871486	37.453	0.32389	37.766	37.579	37.903	0.31312					11	7	2	0	0	0	0.20789	1	2981	2981		44.117	9.9443	1	84049			41207	3817	27474	27486	46896	46896					-0.0377944789859157
PKEGKQEILEL	11	Unmodified	_PKEGKQEILEL_					0	0	0			REV__ENSG00000165118|ENST00000376344|C9orf64	REV__ENSG00000165118|ENST00000376344|C9orf64	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3626708984375	2	642.36391	1282.71327	2.0879	0.0013412	-2.8088	-0.0018043	-0.72094	-0.00046311	642.8636530855173	111.31	0.1705	111.35	111.22	111.39	0.041832					12	6	2	0	0	0	0.70737	1	13464	13464		30.318	1.1477	1	2086500	+		41208	21149	27475	27487	46897	46897					0.08321893566221661
PKEGQNDVT	9	Unmodified	_PKEGQNDVT_					0	0	0			REV__ENSG00000143157|ENST00000367876|POGK	REV__ENSG00000143157|ENST00000367876|POGK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.30108642578125	2	494.240721	986.466889	0.7855	0.00038822	-2.0148	-0.0009958	-1.2293	-0.00060757	494.2398009860043	97.033	0.24136	97.424	97.241	97.482	0.39065					7	5	2	0	0	0	0.20789	1	11682	11682		10.265	0	1	83003	+		41209	19776	27476	27488	46898	46898					-0.026886012128102266
PKEKLEIY	8	Unmodified	_PKEKLEIY_					0	0	0		ENSG00000101230|ENST00000262487|ISM1	ENSG00000101230|ENST00000262487|ISM1	ENSG00000101230|ENST00000262487|ISM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2923889160156	2	510.292225	1018.5699	0.26746	0.00013648	-0.4846	-0.00024729	-0.21715	-0.00011081	510.2918455179726	53.31	1.1574	53.724	52.92	54.077	0.4139					73	27	4	0	0	0	0.3646	1	5374	5374		85.359	12.48	1	3524900			41210	1918	27477	27489	46899	46899					0.06135511245804537
PKELDLARER	10	Unmodified	_PKELDLARER_					0	0	0		ENSG00000178965|ENST00000326665|ERICH3;nc|ENSG00000178965|Q5RHP9-2|ERICH3;ENST00000433746.2_1_1:75036803-75045091:-|nuORF	ENSG00000178965|ENST00000326665|ERICH3	ENSG00000178965|ENST00000326665|ERICH3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8792724609375	2	613.846219	1225.67788	0.91361	0.00056082	-3.7868	-0.0023245	-2.8732	-0.0017637	613.8456542290571	104.38	0.56192	104.5	104.11	104.67	0.11685					18	13	2	0	0	0	0.37624	1	11104	11104		32.812	3.6629	1	173350			41211	7235	27478	27490	46900	46900					0.0740727582906402
PKELSPLALVP	11	Unmodified	_PKELSPLALVP_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|107|3|sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|107|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533935546875	2	582.355357	1162.69616	0.16989	9.8934E-05	-3.1776	-0.0018505	-3.0077	-0.0017515	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.75921	1	12435	12435		19.997	0.6368	1	635410	+		41212	29439	27479	27491	46901	46901					0.1213201775105972
PKELSSLLSII	11	Unmodified	_PKELSSLLSII_					0	0	0		ENSG00000158435|ENST00000289382|CNOT11	ENSG00000158435|ENST00000289382|CNOT11	ENSG00000158435|ENST00000289382|CNOT11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.579833984375	3	400.579706	1198.71729	3.4037	0.0013634	-1.2228	-0.00048981	2.1809	0.00087364	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.75457	1	13709	13709		21.032	1.7696	1	5321000			41213	5476	27480	27492	46902	46902					0.12587983059961516
PKEYLPYSLDN	11	Unmodified	_PKEYLPYSLDN_					0	0	0		ENSG00000132464|ENST00000396073|ENAM	ENSG00000132464|ENST00000396073|ENAM	ENSG00000132464|ENST00000396073|ENAM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.76123046875	3	446.890721	1337.65033	-0.01006	-4.4956E-06	-0.35768	-0.00015984	-0.36774	-0.00016434	447.2240103989786	23.422	0.18014	23.041	22.928	23.108	-0.38178					5	3	2	0	0	0	0.17243	1	1044	1044		12.433	0	1	19290			41214	3796	27481	27493	46903	46903					-0.004986722218063733
PKFGLVRN	8	Unmodified	_PKFGLVRN_					0	0	0			REV__nc|ENSG00000143153|P05026-2|ATP1B1	REV__nc|ENSG00000143153|P05026-2|ATP1B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7774658203125	2	465.779619	929.544686	-0.1189	-5.538E-05	-4.1238	-0.0019208	-4.2427	-0.0019762	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.91005	1	7830	7830		42.474	9.662	1	345200	+		41215	19774	27482	27494	46904	46904					0.07709501233898663
PKFGLVRN	8	Unmodified	_PKFGLVRN_					0	0	0			REV__nc|ENSG00000143153|P05026-2|ATP1B1	REV__nc|ENSG00000143153|P05026-2|ATP1B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774963378906	2	465.779619	929.544686	-0.087401	-4.0709E-05	-4.3327	-0.0020181	-4.4201	-0.0020588	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.87922	1	8323	8323		31.955	4.0726	1	1330000	+		41216	19774	27482	27494	46905	46905					0.07709501233898663
PKFGLVRN	8	Unmodified	_PKFGLVRN_					0	0	0			REV__nc|ENSG00000143153|P05026-2|ATP1B1	REV__nc|ENSG00000143153|P05026-2|ATP1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7777099609375	2	465.779619	929.544686	-1.0371	-0.00048307	-3.4618	-0.0016124	-4.4989	-0.0020955	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.87922	1	7821	7821		31.955	0.42505	1	1384500	+		41217	19774	27482	27494	46906	46906					0.07709501233898663
PKFGLVRN	8	Unmodified	_PKFGLVRN_					0	0	0			REV__nc|ENSG00000143153|P05026-2|ATP1B1	REV__nc|ENSG00000143153|P05026-2|ATP1B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.777587890625	2	465.779619	929.544686	-0.22002	-0.00010248	-4.0013	-0.0018637	-4.2213	-0.0019662	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.884	1	9420	9420		33.516	4.366	1	1042300	+		41218	19774	27482	27494	46907	46907					0.07709501233898663
PKFPKTGK	8	Unmodified	_PKFPKTGK_					0	0	0			REV__nc|ENSG00000088930|Q9H0D6-2|XRN2	REV__nc|ENSG00000088930|Q9H0D6-2|XRN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.77435302734375	2	451.776545	901.538538	-0.024801	-1.1204E-05	-4.4097	-0.0019922	-4.4345	-0.0020034	451.7744086375653	22.061	0.90779	21.617	20.992	21.9	-0.44324					29	20	2	0	0	0	0.5397	1	848	848		73.975	9.7675	1	117650	+		41219	16953	27483	27495	46908	46908					0.08382983002377387
PKFPRVRHKS	10	Unmodified	_PKFPRVRHKS_					0	0	0		ENSG00000198734|ENST00000367797|F5	ENSG00000198734|ENST00000367797|F5	ENSG00000198734|ENST00000367797|F5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.9220275878906	3	417.919279	1250.73601	4.0685	0.0017003	3.0307	0.0012666	7.0992	0.0029669	417.9204504044182	105.51	2.6111	105.69	104.89	107.5	0.18647					199	86	4	0	0	0	0.8505	1	12886	12886		13.508	0	1	601650			41220	8318	27484	27496	46909	46909					0.12067002265030169
PKFRIVNKQ	9	Unmodified	_PKFRIVNKQ_					0	0	0			REV__ENSG00000182050|ENST00000611864|MGAT4C	REV__ENSG00000182050|ENST00000611864|MGAT4C	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	565.346923828125	2	565.345658	1128.67676	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.94	1	112.05	111.55	112.55	0.11118								0	0	0	0.36148	1	12063	12063		11.511	0.64546	1		+		41221	22495	27485	27497	46910	46910					0.11757106250843208
PKFRPLLPQLS	11	Unmodified	_PKFRPLLPQLS_					0	0	0			REV__ENST00000553371.1_2_14:93199069-93214962:-|nuORF	REV__ENST00000553371.1_2_14:93199069-93214962:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3930053710938	2	648.395348	1294.77614	0.024154	1.5661E-05	-3.7072	-0.0024038	-3.6831	-0.0023881	648.3928433509174	107.73	1.0319	107.73	106.84	107.87	0					93	24	4	0	0	0	0.7144	1	11131	11131		29.17	3.1067	1	35129000	+		41222	28644	27486	27498	46911	46911					0.14054504144951352
PKFRPLLPQLS	11	Unmodified	_PKFRPLLPQLS_					0	0	0			REV__ENST00000553371.1_2_14:93199069-93214962:-|nuORF	REV__ENST00000553371.1_2_14:93199069-93214962:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3944702148438	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.69248	1	12276	12276		32.751	11.065	1	2297700	+		41223	28644	27486	27498	46912	46912					0.14054504144951352
PKFSIEGSY	9	Unmodified	_PKFSIEGSY_					0	0	0		CON__Q9N2I2;ENSG00000188488|ENST00000329597|SERPINA5	CON__Q9N2I2	CON__Q9N2I2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.2593383789062	2	514.258382	1026.50221	-1.4791	-0.00076063	3.9013	0.0020063	2.4222	0.0012457	514.2603507644994	45.785	0.5652	45.785	45.415	45.98	0					17	13	2	0	0	0	0.77244	1	3416	3416		32.812	3.6629	1	52489		+	41224	640	27487	27499	46913	46913					-0.009979386849863658
PKFSSGLA	8	Unmodified	_PKFSSGLA_					0	0	0			REV__nc|ENSG00000223731|Q3ZLR7|SUPT20HL1	REV__nc|ENSG00000223731|Q3ZLR7|SUPT20HL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.72430419921875	2	403.723978	805.433404	0.40958	0.00016536	-0.076812	-3.1011E-05	0.33277	0.00013435	403.72380872064997	64.881	1.7093	65.005	63.854	65.563	0.12396					144	69	3	0	0	0	0.90465	1	5784	5784		40.573	7.057	1	1091100	+		41225	23729	27488	27500	46914	46914					0.02290441805962473
PKFSSGLA	8	Unmodified	_PKFSSGLA_					0	0	0			REV__nc|ENSG00000223731|Q3ZLR7|SUPT20HL1	REV__nc|ENSG00000223731|Q3ZLR7|SUPT20HL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.7243957519531	2	403.723978	805.433404	-1.1089	-0.00044771	1.5518	0.00062651	0.44287	0.0001788	403.7244510631445	64.933	1.6766	64.971	63.905	65.582	0.037849					135	64	4	0	0	0	0.89962	1	5795	5795		38.806	0	1	1390300	+		41226	23729	27488	27500	46915	46915					0.02290441805962473
PKGAAIKD	8	Unmodified	_PKGAAIKD_					0	0	0		nc|ENSG00000116117|Q8TEW8-5|PARD3B;nc|ENSG00000116117|Q8TEW8-6|PARD3B;nc|ENSG00000116117|Q8TEW8-3|PARD3B;nc|ENSG00000116117|Q8TEW8-2|PARD3B;ENSG00000116117|ENST00000406610|PARD3B	nc|ENSG00000116117|Q8TEW8-5|PARD3B	nc|ENSG00000116117|Q8TEW8-5|PARD3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2274475097656	2	400.237253	798.459953	1.6934	0.00067777	-2.5921	-0.0010375	-0.89867	-0.00035968	400.23617955967114	50.338	0.32556	50.786	50.641	50.966	0.44761					12	7	2	0	0	0	0.4196	1	4928	4928		15.642	0	1	318070			41227	2898	27489	27501	46916	46916					0.0526613069727091
PKGACKVP	8	Unmodified	_PKGACKVP_					0	0	0		ENSG00000111276|ENST00000228872|CDKN1B	ENSG00000111276|ENST00000228872|CDKN1B	ENSG00000111276|ENST00000228872|CDKN1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.22808837890625	2	400.228374	798.442194	-0.50486	-0.00020206	-0.13642	-5.4597E-05	-0.64128	-0.00025666	400.2285588174541	55.339	1.7133	55.312	54.396	56.109	-0.027279					91	48	3	0	0	0	0.79929	1	5043	5043		18.324	1.6194	1	614190			41228	2570	27490	27502	46917	46917					0.03491092170770571
PKGACKVP	8	Unmodified	_PKGACKVP_					0	0	0		ENSG00000111276|ENST00000228872|CDKN1B	ENSG00000111276|ENST00000228872|CDKN1B	ENSG00000111276|ENST00000228872|CDKN1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2286071777344	2	400.228374	798.442194	-1.8752	-0.0007505	2.1761	0.00087094	0.30094	0.00012044	400.22927707495484	54.825	2.6613	54.881	53.254	55.915	0.055611					132	91	2	0	0	0	0.86288	1	4571	4571		26.796	12.132	1	1098100			41229	2570	27490	27502	46918	46918					0.03491092170770571
PKGACKVP	8	Unmodified	_PKGACKVP_					0	0	0		ENSG00000111276|ENST00000228872|CDKN1B	ENSG00000111276|ENST00000228872|CDKN1B	ENSG00000111276|ENST00000228872|CDKN1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.2284851074219	2	400.228374	798.442194	0.31926	0.00012778	-0.077735	-3.1112E-05	0.24152	9.6665E-05	400.2284187459368	54.769	2.6558	54.861	53.242	55.898	0.091167					119	74	2	0	0	0	0.85277	2	4553	4553;4574		25.45	8.7452	1	1143300			41230	2570	27490	27502	46919;46920	46919					0.03491092170770571
PKGACKVP	8	Unmodified	_PKGACKVP_					0	0	0		ENSG00000111276|ENST00000228872|CDKN1B	ENSG00000111276|ENST00000228872|CDKN1B	ENSG00000111276|ENST00000228872|CDKN1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2281799316406	2	400.228374	798.442194	-0.7523	-0.00030109	1.1167	0.00044694	0.3644	0.00014584	400.2288641883786	54.868	1.9417	54.819	53.946	55.888	-0.049274					98	61	2	0	0	0	0.79929	3	4542	4542;4579;4590		26.796	8.4717	1	1019300			41231	2570	27490	27502	46921;46922;46923	46921					0.03491092170770571
PKGAGREVN	9	Unmodified	_PKGAGREVN_					0	0	0		ENST00000536255.6_1_17:5323045-5323228:+|nuORF	ENST00000536255.6_1_17:5323045-5323228:+|nuORF	ENST00000536255.6_1_17:5323045-5323228:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.25372314453125	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.78124	1	8452	8452		30.318	1.1682	1	1449300			41232	13437	27491	27503	46924	46924					0.027191324691784757
PKGAGREVN	9	Unmodified	_PKGAGREVN_					0	0	0		ENST00000536255.6_1_17:5323045-5323228:+|nuORF	ENST00000536255.6_1_17:5323045-5323228:+|nuORF	ENST00000536255.6_1_17:5323045-5323228:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2537536621094	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.71772	2	8539	8539;8633		39.253	6.4404	1	1578600			41233	13437	27491	27503	46925;46926	46925					0.027191324691784757
PKGAGREVN	9	Unmodified	_PKGAGREVN_					0	0	0		ENST00000536255.6_1_17:5323045-5323228:+|nuORF	ENST00000536255.6_1_17:5323045-5323228:+|nuORF	ENST00000536255.6_1_17:5323045-5323228:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2537536621094	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.64555	3	8479	8345;8479;8491		44.377	10.205	1	1673200			41234	13437	27491	27503	46927;46928;46929	46928					0.027191324691784757
PKGAGREVN	9	Unmodified	_PKGAGREVN_					0	0	0		ENST00000536255.6_1_17:5323045-5323228:+|nuORF	ENST00000536255.6_1_17:5323045-5323228:+|nuORF	ENST00000536255.6_1_17:5323045-5323228:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2536926269531	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.73802	2	8029	8029;8268		37.812	2.1932	1	1603800			41235	13437	27491	27503	46930;46931	46930					0.027191324691784757
PKGAKMGK	8	Unmodified	_PKGAKMGK_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.74005126953125	2	408.741648	815.468743	-1.0833	-0.00044277	-3.5311	-0.0014433	-4.6144	-0.0018861	408.74010288341543	37.409	2.2746	37.356	36.961	39.236	-0.053558					112	51	3	0	0	0	0.87922	1	2627	2627		31.955	10.253	1	289290	+		41236	18307	27492	27504	46932	46932					0.053627810621151184
PKGAVRKDS	9	Unmodified	_PKGAVRKDS_					0	0	0			REV__ENSG00000174225|ENST00000450049|ARL13A	REV__ENSG00000174225|ENST00000450049|ARL13A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2774963378906	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.78983	1	8410	8410		27.882	0	1	2070000	+		41237	21980	27493	27505	46933	46933					0.060319920203255606
PKGDKGDQ	8	Unmodified	_PKGDKGDQ_					0	0	0		nc|ENSG00000187498|P02462-2|COL4A1;ENSG00000187498|ENST00000375820|COL4A1;nc|ENSG00000197467|Q5TAT6-4|COL13A1;nc|ENSG00000197467|Q5TAT6-3|COL13A1;nc|ENSG00000197467|Q5TAT6-8|COL13A1;nc|ENSG00000197467|Q5TAT6-7|COL13A1;nc|ENSG00000197467|Q5TAT6-2|COL13A1;nc|ENSG00000197467|Q5TAT6-5|COL13A1;nc|ENSG00000197467|Q5TAT6-6|COL13A1;nc|ENSG00000197467|Q5TAT6|COL13A1;ENSG00000197467|ENST00000645393|COL13A1	nc|ENSG00000187498|P02462-2|COL4A1	nc|ENSG00000187498|P02462-2|COL4A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.3066711425781	2	422.711599	843.408646	0.24892	0.00010522	0.42819	0.000181	0.67711	0.00028622	422.7116292857199	19.62	0.41269	18.991	18.756	19.168	-0.62961					14	8	2	0	0	0	0.4196	1	562	562		17.365	0	1	28513			41238	7855	27494	27506	46934	46934					-0.019322380674225315
PKGDKGDQ	8	Unmodified	_PKGDKGDQ_					0	0	0		nc|ENSG00000187498|P02462-2|COL4A1;ENSG00000187498|ENST00000375820|COL4A1;nc|ENSG00000197467|Q5TAT6-4|COL13A1;nc|ENSG00000197467|Q5TAT6-3|COL13A1;nc|ENSG00000197467|Q5TAT6-8|COL13A1;nc|ENSG00000197467|Q5TAT6-7|COL13A1;nc|ENSG00000197467|Q5TAT6-2|COL13A1;nc|ENSG00000197467|Q5TAT6-5|COL13A1;nc|ENSG00000197467|Q5TAT6-6|COL13A1;nc|ENSG00000197467|Q5TAT6|COL13A1;ENSG00000197467|ENST00000645393|COL13A1	nc|ENSG00000187498|P02462-2|COL4A1	nc|ENSG00000187498|P02462-2|COL4A1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	422.711599	843.408646	2.6818	0.0011336	-3.3462	-0.0014145	-0.66443	-0.00028086	422.7108229699228	18.979	0.1606	18.904	18.847	19.008	-0.074972	-0.043488	-0.002347	NaN	17.365	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16107			41239	7855	27494	27506							-0.019322380674225315
PKGDKKER	8	Unmodified	_PKGDKKER_					0	0	0			REV__ENSG00000146007|ENST00000274712|ZMAT2	REV__ENSG00000146007|ENST00000274712|ZMAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2784423828125	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.90983	1	7776	7776		42.396	1.618	1	2142700	+		41240	19981	27495	27507	46935	46935					0.060319920203255606
PKGFVNRL	8	Unmodified	_PKGFVNRL_					0	0	0			REV__nc|ENSG00000130714|Q9Y6A1-4|POMT1	REV__nc|ENSG00000130714|Q9Y6A1-4|POMT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7773742675781	2	465.779619	929.544686	-1.5315	-0.00071332	-2.8632	-0.0013336	-4.3947	-0.0020469	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.85277	2	7807	7807;7835		26.796	2.2921	1	991370	+		41241	18898	27496	27508	46936;46937	46936					0.07709501233898663
PKGGLRPVRPS	11	Unmodified	_PKGGLRPVRPS_					0	0	0			REV__nc|ENSG00000116117|Q8TEW8-6|PARD3B	REV__nc|ENSG00000116117|Q8TEW8-6|PARD3B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3530883789062	2	582.354014	1162.69348	2.7406	0.001596	-3.1524	-0.0018358	-0.4118	-0.00023981	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.7144	1	12730	12730		29.17	0	1	7862700	+		41242	18178	27497	27509	46938	46938					0.1186360713677459
PKGGPPLPLH	10	Unmodified	_PKGGPPLPLH_					0	0	0			REV__ENST00000418359.7_2_12:70636994-70671968:+|nuORF	REV__ENST00000418359.7_2_12:70636994-70671968:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.80255126953125	2	506.800552	1011.58655	-0.1225	-6.2083E-05	1.1991	0.00060769	1.0766	0.00054561	506.8011249172422	46.216	2.1586	46.137	45.418	47.576	-0.079006					85	63	2	0	0	0	0.86201	1	3375	3375		24.203	1.1603	1	271040	+		41243	26460	27498	27510	46939	46939					0.08122056922411502
PKGGRQIN	8	Unmodified	_PKGGRQIN_					0	0	0		nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3	nc|ENSG00000163359|P12111-4|COL6A3	nc|ENSG00000163359|P12111-4|COL6A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2524108886719	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.84341	1	7111	7111		24.203	2.2429	1	712390			41244	5787	27499	27511	46940	46940					0.04839453677379879
PKGIAQIH	8	Unmodified	_PKGIAQIH_					0	0	0			REV__ENSG00000134438|ENST00000334889|RAX	REV__ENSG00000134438|ENST00000334889|RAX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.2575378417969	2	432.25852	862.502486	0.095672	4.1355E-05	-1.4893	-0.00064377	-1.3936	-0.00060241	432.25767954187023	68.33	1.4604	68.877	68.284	69.744	0.54722					66	34	3	0	0	0	0.86288	1	7539	7539		26.796	0	1	472160	+		41245	19141	27500	27512	46941	46941					0.06573525825501747
PKGIVHTQ	8	Unmodified	_PKGIVHTQ_					0	0	0		nc|ENSG00000154930|Q9NUB1-3|ACSS1;nc|ENSG00000154930|Q9NUB1-4|ACSS1;nc|ENSG00000154930|Q9NUB1-2|ACSS1;ENSG00000154930|ENST00000323482|ACSS1	nc|ENSG00000154930|Q9NUB1-3|ACSS1	nc|ENSG00000154930|Q9NUB1-3|ACSS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.258056640625	2	440.255977	878.497401	0.51138	0.00022514	-2.0024	-0.00088159	-1.4911	-0.00065645	440.25489743001594	75.264	0.75718	75.396	75.11	75.867	0.13207					35	20	3	0	0	0	0.82658	1	7011	7011		21.96	1.4781	1	111060			41246	5305	27501	27513	46942	46942					0.05329221962904285
PKGKAIKK	8	Unmodified	_PKGKAIKK_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001403808594	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.86906	1	7993	7993		8.2313	0	1	6323600			41247	12113	27502	27514	46943	46943					0.14627262273359065
PKGKAMGK	8	Unmodified	_PKGKAMGK_					0	0	0			REV__ENST00000596245.1_1_19:8590207-8591472:-|nuORF	REV__ENST00000596245.1_1_19:8590207-8591472:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.73870849609375	2	408.741648	815.468743	-1.9297	-0.00078873	-2.8268	-0.0011554	-4.7564	-0.0019441	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.87922	1	2281	2281		31.955	0	1	521170	+		41248	19739	27503	27515	46944	46944					0.0536278106210375
PKGKLPIP	8	Unmodified	_PKGKLPIP_					0	0	0		nc|ENSG00000183621|Q7Z4V0-3|ZNF438;nc|ENSG00000183621|Q7Z4V0-2|ZNF438;ENSG00000183621|ENST00000436087|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.28033447265625	2	425.281463	848.548374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.248	1	62.369	61.869	62.869	0.1209								0	0	0	0.30252	1	5424	5424		19.36	4.6959	1				41249	7546	27504	27516	46945	46945					0.11804171007736386
PKGKRIIVIIA	11	Unmodified	_PKGKRIIVIIA_					0	0	0			REV__nc|ENSG00000060656|Q92729-3|PTPRU	REV__nc|ENSG00000060656|Q92729-3|PTPRU	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3662109375	2	604.416083	1206.81761	1.0468	0.0006327	1.3379	0.00080866	2.3847	0.0014414	604.4170962727158	104.11	0.16185	104.29	104.18	104.34	0.17096					7	3	3	0	0	0	0.18099	1	11034	11034		14.865	8.5522	1	215500	+		41250	16450	27505	27517	46946	46946					0.22247684904277776
PKGLDEIQCSL	11	Unmodified	_PKGLDEIQCSL_					0	0	0		ENSG00000162494|ENST00000376085|LRRC38	ENSG00000162494|ENST00000376085|LRRC38	ENSG00000162494|ENST00000376085|LRRC38	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	601.8068237304688	2	601.807913	1201.60127	-1.4083	-0.00084753	-2.4804	-0.0014927	-3.8887	-0.0023403	601.8062804734025	41.76	0.68602	42.174	41.899	42.585	0.4139					44	17	3	0	0	0	0.13035	1	3677	3677		85.862	0.70101	1	1400600			41251	5693	27506	27518	46947	46947					0.008537162175798585
PKGLEFHIKLT	11	Unmodified	_PKGLEFHIKLT_					0	0	0			REV__ENSG00000114127|ENST00000392981|XRN1	REV__ENSG00000114127|ENST00000392981|XRN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8826904296875	2	641.87953	1281.74451	1.9607	0.0012585	2.5918	0.0016636	4.5525	0.0029222	641.8810415769531	95.839	2.2822	95.782	94.474	96.756	-0.057526					187	53	4	0	0	0	0.732	1	10382	10382		26.063	0.48933	1	1600600	+		41252	18034	27507	27519	46948	46948					0.11490511390979918
PKGLEFHIKLT	11	Unmodified	_PKGLEFHIKLT_					0	0	0			REV__ENSG00000114127|ENST00000392981|XRN1	REV__ENSG00000114127|ENST00000392981|XRN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8827514648438	2	641.87953	1281.74451	1.6823	0.0010798	2.8836	0.0018509	4.5658	0.0029307	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.67778	1	10531	10531		35.152	1.2304	1	3772700	+		41253	18034	27507	27519	46949	46949					0.11490511390979918
PKGMVAVVV	9	Unmodified	_PKGMVAVVV_					0	0	0		nc|ENSG00000178562|P10747-7|CD28	nc|ENSG00000178562|P10747-7|CD28	nc|ENSG00000178562|P10747-7|CD28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2744140625	2	450.272781	898.531009	-0.14122	-6.3587E-05	3.6649	0.0016502	3.5237	0.0015866	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.78536	1	9772	9772		29.15	0.89528	1	47650000			41254	15123	27508	27520	46950	46950					0.07768507410446546
PKGNDAVF	8	Unmodified	_PKGNDAVF_					0	0	0			REV__nc|ENSG00000171566|O43660-2|PLRG1	REV__nc|ENSG00000171566|O43660-2|PLRG1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	424.2188415527344	2	424.21906	846.423567	-0.98932	-0.00041969	0.0014772	6.2667E-07	-0.98784	-0.00041906	424.2189731189245	101.17	1.7059	101.17	100.51	102.21	0					61	40	2	0	0	0	0.90465	1	10271	10271		40.573	3.4135	1	607460	+		41255	21751	27509	27521	46951	46951					-0.005787461994259502
PKGNDAVF	8	Unmodified	_PKGNDAVF_					0	0	0			REV__nc|ENSG00000171566|O43660-2|PLRG1	REV__nc|ENSG00000171566|O43660-2|PLRG1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	424.21906	846.423567	2.5012	0.0010611	-3.4581	-0.001467	-0.95693	-0.00040595	424.2174916440496	100.89	0.85032	101.24	100.69	101.54	0.34591	0.070456	-0.0011658	NaN	40.573	53	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1130200	+		41256	21751	27509	27521							-0.005787461994259502
PKGPCLIL	8	Unmodified	_PKGPCLIL_					0	0	0			REV__ENST00000463377.6_2_17:61926730-61939809:+|nuORF	REV__ENST00000463377.6_2_17:61926730-61939809:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.7550354003906	2	420.754224	839.493896	-0.39386	-0.00016572	2.8186	0.0011859	2.4247	0.0010202	420.7553186920564	20.988	1.6049	20.924	19.96	21.565	-0.064743					109	65	2	0	0	0	0.86288	1	583	583		26.796	0	1	83540	+		41257	27071	27510	27522	46952	46952					0.06772835864671833
PKGPPGTKGRR	11	Unmodified	_PKGPPGTKGRR_					0	0	0			REV__ENSG00000082293|ENST00000620364|COL19A1	REV__ENSG00000082293|ENST00000620364|COL19A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8429565429688	2	575.843813	1149.67307	-1.368	-0.00078774	-0.033632	-1.9367E-05	-1.4016	-0.00080711	575.8436459594299	90.372	2.9394	90.548	88.581	91.52	0.1758					221	69	4	0	0	0	0.732	1	9004	9004		26.063	0.48933	1	2135900	+		41258	16838	27511	27523	46953	46953					0.10422436476983421
PKGQQGVR	8	Unmodified	_PKGQQGVR_					0	0	0		ENST00000427563.1_1_1:40768460-40770015:-|nuORF;ENST00000482722.5_1_1:40766856-40777859:-|nuORF;ENSG00000049089|ENST00000372748|COL9A2	ENST00000427563.1_1_1:40768460-40770015:-|nuORF	ENST00000427563.1_1_1:40768460-40770015:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2513122558594	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.84341	1	7704	7704		24.203	1.1603	1	3322700			41259	981	27512	27524	46954	46954					0.04839453677379879
PKGRFPPAL	9	Unmodified	_PKGRFPPAL_					0	0	0			REV__ENST00000394785.7_1_4:103997423-103997750:-|nuORF	REV__ENST00000394785.7_1_4:103997423-103997750:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7955627441406	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.78058	1	4186	4186		30.504	2.2494	1	1232600	+		41260	26089	27513	27525	46955	46955					0.08446074267976655
PKGRFVMLL	9	Unmodified	_PKGRFVMLL_					0	0	0		ENST00000492535.1_1_22:32889009-32894514:+|nuORF;nc|ENSG00000100225|Q9Y3I1-3|FBXO7;nc|ENSG00000100225|Q9Y3I1-2|FBXO7;ENSG00000100225|ENST00000266087|FBXO7	ENST00000492535.1_1_22:32889009-32894514:+|nuORF;nc|ENSG00000100225|Q9Y3I1-3|FBXO7	ENST00000492535.1_1_22:32889009-32894514:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.821044921875	2	530.82043	1059.62631	-0.047896	-2.5424E-05	1.3406	0.00071161	1.2927	0.00068619	530.8209770202351	79.275	0.97966	79.825	79.318	80.298	0.54945					57	22	3	0	0	0	0.77546	1	9113	9113		31.955	0	1	876930			41261	12703;1810	27514	27526	46956	46956					0.09887860601497778
PKGRKGPE	8	Unmodified	_PKGRKGPE_					0	0	0			REV__ENSG00000188153|ENST00000328300|COL4A5	REV__ENSG00000188153|ENST00000328300|COL4A5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801208496094	2	434.753601	867.49265	-0.98843	-0.00042972	3.1912	0.0013874	2.2028	0.00095766	434.75527873393713	37.125	0.53029	37.071	36.783	37.314	-0.053558					15	11	2	0	0	0	0.4196	1	2500	2500		16.473	0	1	37722	+		41262	22980	27515	27527	46957	46957					0.053603378201387386
PKGSRHPNKI	10	Unmodified	_PKGSRHPNKI_					0	0	0			REV__ENSG00000188959|ENST00000400613|C9orf152	REV__ENSG00000188959|ENST00000400613|C9orf152	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3295288085938	2	567.330539	1132.64652	1.5887	0.00090129	-2.6625	-0.0015105	-1.0739	-0.00060923	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.86698	1	9437	9437		28.081	1.3886	1	5459400	+		41263	23047	27516	27528	46958	46958					0.08550747585650242
PKGSSHVK	8	Unmodified	_PKGSSHVK_					0	0	0			REV__nc|ENSG00000147081|Q5JQC9-2|AKAP4	REV__nc|ENSG00000147081|Q5JQC9-2|AKAP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.9336242675781	2	420.240327	838.466101	0.98289	0.00041305	-2.5333	-0.0010646	-1.5504	-0.00065156	420.23907846112667	24.074	0.34909	23.692	23.533	23.882	-0.38178					12	7	2	0	0	0	0.4196	1	1148	1148		15.642	7.4105	1	48109	+		41264	20048	27517	27529	46959	46959					0.040406489287988734
PKGSTPHS	8	Unmodified	_PKGSTPHS_					0	0	0			REV__ENSG00000156463|ENST00000359120|SH3RF2	REV__ENSG00000156463|ENST00000359120|SH3RF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2484130859375	2	405.70886	809.403166	-1.3639	-0.00055335	1.024	0.00041544	-0.33993	-0.00013791	405.70911370171143	88.721	0.56039	89.192	88.916	89.476	0.47068					24	13	2	0	0	0	0.4196	1	10468	10468		23.042	1.0826	1	682800	+		41265	20487	27518	27530	46960	46960					-0.009159168592532296
PKGTPLYTR	9	Unmodified	_PKGTPLYTR_					0	0	0		ENST00000393784.7_1_5:172378203-172378416:+|nuORF	ENST00000393784.7_1_5:172378203-172378416:+|nuORF	ENST00000393784.7_1_5:172378203-172378416:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7930297851562	2	516.795466	1031.57638	-0.047699	-2.465E-05	-4.0302	-0.0020828	-4.0779	-0.0021075	516.793282030647	86.386	2.8071	86.453	84.68	87.487	0.067436					129	64	3	0	0	0	0.71772	1	8695	8695		39.253	2.0937	1	264930			41266	11053	27519	27531	46961	46961					0.061854491971644165
PKGTPVLL	8	Unmodified	_PKGTPVLL_					0	0	0			REV__nc|ENSG00000114646|O95196-3|CSPG5	REV__nc|ENSG00000114646|O95196-3|CSPG5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7677307128906	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.86288	1	2826	2826		26.796	0	1	818920	+		41267	18057	27520	27532	46962	46962					0.09792178253815109
PKGVLFSSKSA	11	Unmodified	_PKGVLFSSKSA_					0	0	0		ENSG00000121057|ENST00000337714|AKAP1;nc|ENSG00000121057|Q92667-2|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8197631835938	2	560.821681	1119.62881	-0.40201	-0.00022545	-2.9229	-0.0016392	-3.3249	-0.0018647	560.8199126084926	92.305	2.2839	92.767	91.977	94.26	0.46249					128	53	3	0	0	0	0.62614	1	11035	11035		41.427	11.109	1	273790			41268	3163	27521	27533	46963	46963					0.07377987540144204
PKHAPPGL	8	Unmodified	_PKHAPPGL_					0	0	0			REV__ENSG00000204424|ENST00000375832|LY6G6F	REV__ENSG00000204424|ENST00000375832|LY6G6F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7398681640625	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.81548	1	2016	2016		20.482	4.8456	1	1448600	+		41269	23491	27522	27534	46964	46964					0.05025854279756459
PKHDEADSE	9	Unmodified	_PKHDEADSE_					0	0	0			REV__nc|ENSG00000091129|Q92823-5|NRCAM	REV__nc|ENSG00000091129|Q92823-5|NRCAM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	514.2199096679688	2	514.219985	1026.42542	-0.41696	-0.00021441	0.48818	0.00025103	0.071216	3.6621E-05	514.220108431148	29.981	0.69284	30.047	29.668	30.361	0.066727					67	31	3	0	0	0	0.41566	1	1307	1307		56.721	5.3856	1	329530	+		41270	29726	27523	27535	46965	46965					-0.08673781972129291
PKHLAPSPATY	11	Unmodified	_PKHLAPSPATY_					0	0	0		ENSG00000141579|ENST00000269394|ZNF750	ENSG00000141579|ENST00000269394|ZNF750	ENSG00000141579|ENST00000269394|ZNF750	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8673095703125	2	591.319306	1180.62406	0.85161	0.00050357	-4.161	-0.0024605	-3.3094	-0.0019569	591.3172856895424	103.12	0.15503	103.3	103.2	103.36	0.18298					5	3	2	0	0	0	0.15819	1	10878	10878		69.628	41.546	1	80690			41271	4516	27524	27536	46966	46966					0.040971033973846716
PKHRLIKV	8	Unmodified	_PKHRLIKV_					0	0	0		nc|ENSG00000107338|Q15464-2|SHB;ENSG00000105251|ENST00000543264|SHD;ENSG00000107338|ENST00000377707|SHB	nc|ENSG00000107338|Q15464-2|SHB	nc|ENSG00000107338|Q15464-2|SHB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.8340759277344	2	495.832186	989.649819	0.22087	0.00010952	4.1686	0.0020669	4.3895	0.0021765	495.83424949571145	39.993	1.2825	39.962	39.281	40.563	-0.030514					47	32	2	0	0	0	0.85787	1	2798	2798		9.4706	0	1	101230			41272	2195	27525	27537	46967	46967					0.15458042430316254
PKIAVSKM	8	Unmodified	_PKIAVSKM_					0	0	0		ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4	ENSG00000111642|ENST00000544040|CHD4	ENSG00000111642|ENST00000544040|CHD4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26666259765625	2	437.264956	872.515359	-2.1128	-0.00092385	3.801	0.001662	1.6882	0.00073819	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.85277	1	910	910		25.45	4.9683	1	1366900			41273	2592	27526	27538	46968	46968					0.0740022089340755
PKIDKKIIRM	10	Unmodified	_PKIDKKIIRM_					0	0	0		nc|ENSG00000138380|Q8N187-3|CARF;ENSG00000138380|ENST00000438828|CARF	nc|ENSG00000138380|Q8N187-3|CARF	nc|ENSG00000138380|Q8N187-3|CARF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3928833007812	2	621.391751	1240.76895	-1.2196	-0.00075786	2.6368	0.0016385	1.4171	0.0008806	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.8651	1	11102	11102		25.574	4.7369	1	23459000			41274	4292	27527	27539	46969	46969					0.15819448272850423
PKIDKKIIRM	10	Unmodified	_PKIDKKIIRM_					0	0	0		nc|ENSG00000138380|Q8N187-3|CARF;ENSG00000138380|ENST00000438828|CARF	nc|ENSG00000138380|Q8N187-3|CARF	nc|ENSG00000138380|Q8N187-3|CARF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.3930053710938	2	621.391751	1240.76895	2.1086	0.0013103	-0.13668	-8.4931E-05	1.9719	0.0012253	621.3915992412323	104.3	2.0291	104.48	104.04	106.07	0.18888					138	51	4	0	0	0	0.86899	1	12738	12738		14.137	3.2716	1	1168000			41275	4292	27527	27539	46970	46970					0.15819448272850423
PKIFVAHSK	9	Unmodified	_PKIFVAHSK_					0	0	0		nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;ENSG00000050820|ENST00000162330|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-2|BCAR1;ENST00000566982.1_1_16:75263411-75272069:-|nuORF;nc|ENSG00000050820|P56945-4|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	nc|ENSG00000050820|P56945-6|BCAR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8104858398438	2	513.808377	1025.6022	-0.22351	-0.00011484	1.6547	0.00085019	1.4312	0.00073535	513.8091977878661	50.938	0.75373	50.946	50.757	51.511	0.0077438					49	23	3	0	0	0	0.73802	1	4398	4398		37.812	2.1932	1	174420			41276	14751;14752	27528	27540	46971	46971					0.0904234343945518
PKIHRSAS	8	Unmodified	_PKIHRSAS_					0	0	0		ENST00000497784.1_2_7:140434399-140508041:-|nuORF;ENSG00000157764|ENST00000646891|BRAF;ENST00000479537.5_1_7:140434399-140447180:-|nuORF	ENST00000497784.1_2_7:140434399-140508041:-|nuORF	ENST00000497784.1_2_7:140434399-140508041:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.25872802734375	2	448.259051	894.503549	0.65386	0.0002931	-0.54104	-0.00024253	0.11282	5.0571E-05	448.25866214707224	89.921	4.4379	90.073	86.786	91.224	0.1519					231	105	5	0	0	0	0.87064	1	9020	9020		29.15	8.6677	1	2709200			41277	5447	27529	27541	46972	46972					0.05207740194418875
PKIIELLEP	9	Unmodified	_PKIIELLEP_					0	0	0			REV__nc|ENSG00000135775|Q14746-2|COG2	REV__nc|ENSG00000135775|Q14746-2|COG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.328125	2	526.323525	1050.6325	-0.93594	-0.00049261	3.4491	0.0018153	2.5132	0.0013227	526.3251692142991	71.452	0.88377	71.528	70.921	71.805	0.076225					58	42	2	0	0	0	0.7932	1	6424	6424		21.96	0	1	116590	+		41278	19249	27530	27542	46973	46973					0.10920657313999982
PKIIVQRNKR	10	Unmodified	_PKIIVQRNKR_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|293|3|anti-sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|293|3|anti-sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3799438476562	2	626.404038	1250.79352	-1.2034	-0.00075381	-1.3261	-0.00083069	-2.5295	-0.0015845	626.4031496195884	105.79	0.47687	105.86	105.76	106.24	0.073112					21	11	3	0	0	0	0.37624	1	11283	11283		14.865	0	1	454640	+		41279	29444	27531	27543	46974	46974					0.17815844470578668
PKIKFHLGIL	10	Unmodified	_PKIKFHLGIL_					0	0	0			REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.3765869140625	2	583.376426	1164.7383	-2.1463	-0.0012521	1.2498	0.00072913	-0.89647	-0.00052298	583.3769989741414	43.059	2.3047	43.833	43.416	45.72	0.7738					144	56	4	0	0	0	0.85466	5	3878	3866;3878;3889;3920;3955		27.882	10.517	1	7573300	+		41280	17852	27532	27544	46975;46976;46977;46978;46979	46976					0.16252037950107479
PKIKFTNG	8	Unmodified	_PKIKFTNG_					0	0	0		nc|ENSG00000293307|Q8IWF7|UBE2DNL	nc|ENSG00000293307|Q8IWF7|UBE2DNL	nc|ENSG00000293307|Q8IWF7|UBE2DNL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.76422119140625	2	452.766178	903.517802	-1.8886	-0.0008551	-4.1399	-0.0018744	-6.0285	-0.0027295	452.76426110841714	39.559	0.86848	39.559	39.19	40.058	0					46	20	3	0	0	0	0.87922	1	2561	2561		31.955	5.1588	1	144770			41281	15351	27533	27545	46980	46980					0.06218392622713509
PKILSHIAPAF	11	Unmodified	_PKILSHIAPAF_					0	0	0		ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	ENSG00000135049|ENST00000357081|AGTPBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.8566284179688	2	597.355691	1192.69683	-0.84393	-0.00050413	1.3726	0.00081991	0.52864	0.00031578	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.70737	1	11107	11107		30.318	2.4355	1	1407500			41282	3978	27534	27546	46981	46981					0.10818857190770359
PKIPLLDRATK	11	Unmodified	_PKIPLLDRATK_					0	0	0			REV__ENSG00000176853|ENST00000334705|FAM91A1	REV__ENSG00000176853|ENST00000334705|FAM91A1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3941650390625	2	626.392805	1250.77106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.44	1	108.52	108.02	109.02	0.084412								0	0	0	0.56276	1	11661	11661		31.53	1.2121	1		+		41283	22148	27535	27547	46982	46982					0.1557020028228635
PKIPSLTI	8	Unmodified	_PKIPSLTI_					0	0	0			REV__nc|ENSG00000106536|P78424-2|POU6F2	REV__nc|ENSG00000106536|P78424-2|POU6F2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2519836425781	2	434.778754	867.542954	-0.10891	-4.7353E-05	1.9558	0.00085036	1.8469	0.000803	434.77998683710365	78.486	0.38091	78.897	78.634	79.014	0.4106					12	8	2	0	0	0	0.4196	1	8944	8944		9.1829	2.4474	1	84575	+		41284	17616	27536	27548	46983	46983					0.10388447425270897
PKITRREPL	9	Unmodified	_PKITRREPL_					0	0	0		nc|ENSG821|P63135|ERVK-7_pol;nc|ENSG851|Q9QC07|ERVK-18_pol;nc|ENSG855|P10266|ERVK-10_pol;nc|ENSG853|Q9UQG0|ERVK-11;nc|ENSG844|Q9WJR5|ERVK-19_pol;nc|ENSG826|Q9BXR3|ERVK-6_gag;nc|ENSG832|P63136|ERVK-25_pol;nc|ENSG814|P63133|ERVK-8_pol;nc|ENSG801|P63132|HERVK_113_pro	nc|ENSG821|P63135|ERVK-7_pol	nc|ENSG821|P63135|ERVK-7_pol	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.28466796875	2	555.343115	1108.67168	-0.73933	-0.00041058	0.515	0.000286	-0.22433	-0.00012458	555.3433180511157	45.704	0.52795	46.175	45.847	46.375	0.4714					22	12	2	0	0	0	0.20789	1	4273	4273		66.429	16.988	1	370630			41285	15361	27537	27549	46984	46984					0.12168802388214317
PKITYRVLYL	10	Unmodified	_PKITYRVLYL_					0	0	0		ENST00000463792.5_1_2:220100124-220100442:+|nuORF	ENST00000463792.5_1_2:220100124-220100442:+|nuORF	ENST00000463792.5_1_2:220100124-220100442:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.59368896484375	3	422.592058	1264.75434	-1.6666	-0.00070429	4.3892	0.0018548	2.7226	0.0011505	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.85441	1	4664	4664		20.837	1.5745	1	771770			41286	12077	27538	27550	46985	46985					0.13255699396381715
PKKAKKSSAS	10	Unmodified	_PKKAKKSSAS_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.8147583007812	2	516.314023	1030.61349	0.8692	0.00044878	-0.9214	-0.00047573	-0.052199	-2.6951E-05	516.3134322362838	115.8	0.99966	115.83	115.61	116.61	0.026466					54	32	2	0	0	0	0.8505	1	12786	12786		19.104	2.6304	1	55186	+		41287	20445	27539	27551	46986	46986					0.09941120742928433
PKKAKKSSAS	10	Unmodified	_PKKAKKSSAS_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3125610351562	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86047	1	12475	12475		23.523	4.1627	1	4038100	+		41288	20445	27539	27551	46987	46987					0.09941120742928433
PKKAKPVK	8	Unmodified	_PKKAKPVK_					0	0	0		nc|ENSG00000189060|P07305-2|H1-0;ENSG00000189060|ENST00000340857|H1-0	nc|ENSG00000189060|P07305-2|H1-0	nc|ENSG00000189060|P07305-2|H1-0	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7615966796875	2	448.308013	894.601472	-0.042137	-1.8891E-05	-3.1723	-0.0014222	-3.2144	-0.001441	448.3065149989359	23.401	2.3628	23.019	21.475	23.837	-0.38178					107	54	3	0	0	0	0.4196	1	1127	1127		26.796	14.589	1	386980			41289	7986	27540	27552	46988	46988					0.1499554879040943
PKKCPGRVVGG	11	Unmodified	_PKKCPGRVVGG_					0	0	0		ENSG00000122194|ENST00000308192|PLG	ENSG00000122194|ENST00000308192|PLG	ENSG00000122194|ENST00000308192|PLG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3171997070312	2	549.316043	1096.61753	0.85079	0.00046735	2.0297	0.0011149	2.8804	0.0015823	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.7342	1	10580	10580		25.574	1.0549	1	2023500			41290	3212	27541	27553	46989	46989					0.07308886965006423
PKKCPGRVVGG	11	Unmodified	_PKKCPGRVVGG_					0	0	0		ENSG00000122194|ENST00000308192|PLG	ENSG00000122194|ENST00000308192|PLG	ENSG00000122194|ENST00000308192|PLG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3189086914062	2	549.316043	1096.61753	-1.4544	-0.00079891	4.3496	0.0023893	2.8953	0.0015904	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.75921	1	10577	10577		19.997	0	1	2310400			41291	3212	27541	27553	46990	46990					0.07308886965006423
PKKFTCSK	8	Unmodified	_PKKFTCSK_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.76116943359375	2	469.760038	937.505523	0.18565	8.7212E-05	3.1051	0.0014587	3.2908	0.0015459	469.76127734615494	35.397	1.4141	35.503	35.2	36.614	0.10604					71	45	2	0	0	0	0.88601	1	1855	1855		34.173	5.023	1	151100	+		41292	22085	27542	27554	46991	46991					0.03427032888009762
PKKGPLPSSR	10	Unmodified	_PKKGPLPSSR_					0	0	0			REV__ENSG00000043462|ENST00000046794|LCP2	REV__ENSG00000043462|ENST00000046794|LCP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.7935180664062	2	533.822015	1065.62948	0.16204	8.6498E-05	0.38722	0.00020671	0.54926	0.00029321	533.8221208341309	16.351	0.23071	15.752	15.601	15.832	-0.59873					7	4	2	0	0	0	0.37624	1	105	105		36.447	3.6343	1	44584	+		41293	16337	27543	27555	46992	46992					0.09928826979853511
PKKGRSITR	9	Unmodified	_PKKGRSITR_					0	0	0			REV__ENSG00000100426|ENST00000216268|ZBED4	REV__ENSG00000100426|ENST00000216268|ZBED4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.788818359375	2	521.827632	1041.64071	1.1358	0.00059267	-0.62408	-0.00032566	0.51168	0.00026701	521.8269287990873	19.221	0.51525	18.751	18.459	18.974	-0.46967					13	11	2	0	0	0	0.20789	1	466	466		23.523	2.5758	1	58679	+		41294	17194	27544	27556	46993	46993					0.12155649073974928
PKKGRSITR	9	Unmodified	_PKKGRSITR_					0	0	0			REV__ENSG00000100426|ENST00000216268|ZBED4	REV__ENSG00000100426|ENST00000216268|ZBED4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	521.827632	1041.64071	0.20422	0.00010657	0.47323	0.00024695	0.67745	0.00035351	521.8273824310838	19.385	0.31698	18.755	18.575	18.892	-0.6296	0.0021056	0.00079755	NaN	23.523	11	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66449	+		41295	17194	27544	27556							0.12155649073974928
PKKIPGAR	8	Unmodified	_PKKIPGAR_					0	0	0			REV__nc|ENSG00000204469|P48634-2|PRRC2A	REV__nc|ENSG00000204469|P48634-2|PRRC2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77960205078125	2	433.782162	865.549771	-0.59917	-0.00025991	-2.2318	-0.00096811	-2.831	-0.001228	433.78114569503924	54.734	0.36838	54.709	54.463	54.831	-0.025955					18	11	2	0	0	0	0.4196	1	4963	4963		3.6843	0	1	151110	+		41296	23495	27545	27557	46994	46994					0.11161805096503485
PKKIPGAR	8	Unmodified	_PKKIPGAR_					0	0	0			REV__nc|ENSG00000204469|P48634-2|PRRC2A	REV__nc|ENSG00000204469|P48634-2|PRRC2A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77984619140625	2	433.782162	865.549771	0.27426	0.00011897	-4.0376	-0.0017514	-3.7634	-0.0016325	433.7811575657727	49.578	1.7204	49.621	48.884	50.604	0.042236					168	44	5	0	0	0	0.4196	1	3766	3766		11.511	4.3177	1	5434100	+		41297	23495	27545	27557	46995	46995					0.11161805096503485
PKKKIFLVSL	10	Unmodified	_PKKKIFLVSL_					0	0	0		ENST00000521425.5_2_8:71499341-71506778:-|nuORF	ENST00000521425.5_2_8:71499341-71506778:-|nuORF	ENST00000521425.5_2_8:71499341-71506778:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	586.8905639648438	2	586.891909	1171.76927	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.157	1	22.245	21.745	22.745	0.088013								0	0	0	0.45132	1	653	653		14.865	3.3539	1				41298	13169	27546	27558	46996	46996					0.1902519126435891
PKKKKKPKAKP	11	Unmodified	_PKKKKKPKAKP_					0	0	0			REV__ENSG00000082516|ENST00000285873|GEMIN5	REV__ENSG00000082516|ENST00000285873|GEMIN5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3028259277344	3	426.630847	1276.87071	0.10348	4.4149E-05	0.049346	2.1053E-05	0.15283	6.5201E-05	426.63078480270065	76.941	1.6583	77.51	76.641	78.3	0.56836					57	45	2	0	0	0	0.17955	1	8771	8771		12.957	6.6366	1	335630	+		41299	16841	27547	27559	46997	46997					0.24335062686918718
PKKLGKKA	8	Unmodified	_PKKLGKKA_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.300048828125	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.82419	2	6635	6635;6859		13.775	0.81615	1	1072400	+		41300	20085	27548	27560	46998;46999	46998					0.14627262273359065
PKKLGKKA	8	Unmodified	_PKKLGKKA_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3002624511719	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.83646	1	7188	7188		12.207	3.3845	1	1702600	+		41301	20085	27548	27560	47000	47000					0.14627262273359065
PKKLGKKA	8	Unmodified	_PKKLGKKA_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.29998779296875	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.79929	4	7245	7222;7232;7245;7341		19.36	4.6959	1	881780	+		41302	20085	27548	27560	47001;47002;47003;47004	47003					0.14627262273359065
PKKLGKKA	8	Unmodified	_PKKLGKKA_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3001403808594	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.80706	1	7044	7044		19.36	0	1	1921500	+		41303	20085	27548	27560	47005	47005					0.14627262273359065
PKKLGKKA	8	Unmodified	_PKKLGKKA_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3003845214844	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.83058	1	6542	6542		12.959	0.75233	1	1819800	+		41304	20085	27548	27560	47006	47006					0.14627262273359065
PKKLGKKA	8	Unmodified	_PKKLGKKA_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3001708984375	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.83058	2	6444	6444;6549		12.959	0.75233	1	1852500	+		41305	20085	27548	27560	47007;47008	47007					0.14627262273359065
PKKLGKKA	8	Unmodified	_PKKLGKKA_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3003234863281	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.79929	4	8003	7967;8003;8285;8333		18.324	4.5491	1	5485100	+		41306	20085	27548	27560	47009;47010;47011;47012	47010					0.14627262273359065
PKKLGKKA	8	Unmodified	_PKKLGKKA_					0	0	0			REV__ENSG00000147799|ENST00000377307|ARHGAP39	REV__ENSG00000147799|ENST00000377307|ARHGAP39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2999572753906	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.79929	4	8296	7675;8296;8378;8439		18.324	5.3652	1	6323600	+		41307	20085	27548	27560	47013;47014;47015;47016	47014					0.14627262273359065
PKKLGKPK	8	Unmodified	_PKKLGKPK_					0	0	0			REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.3066711425781	2	448.308013	894.601472	-0.042137	-1.8891E-05	-3.1723	-0.0014222	-3.2144	-0.001441	448.3065149989359	23.401	2.3628	23.019	21.475	23.837	-0.38178					107	54	3	0	0	0	0.91005	1	1031	1031		42.474	0	1	386980	+		41308	17004	27549	27561	47017	47017					0.1499554879040943
PKKLGKPK	8	Unmodified	_PKKLGKPK_					0	0	0			REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3066711425781	2	448.308013	894.601472	0.78514	0.00035198	-3.786	-0.0016973	-3.0008	-0.0013453	448.30619684466785	23.308	1.6905	22.734	21.403	23.094	-0.57415					81	41	2	0	0	0	0.80706	1	1041	1041		19.36	0	1	470240	+		41309	17004	27549	27561	47018	47018					0.1499554879040943
PKKLGKPK	8	Unmodified	_PKKLGKPK_					0	0	0			REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	448.308013	894.601472	-0.34661	-0.00015539	-2.3098	-0.0010355	-2.6564	-0.0011909	448.30678765863104	23.404	0.39169	23.352	23.161	23.553	-0.052114	0.14794	0.00095588	NaN	42.474	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13195	+		41310	17004	27549	27561							0.1499554879040943
PKKLGKPK	8	Unmodified	_PKKLGKPK_					0	0	0			REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	448.308013	894.601472	1.4464	0.00064841	-5.3328	-0.0023907	-3.8864	-0.0017423	448.3054379376986	23.815	0.54731	23.241	23.094	23.641	-0.57415	0.037076	-0.0017546	NaN	42.474	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	247890	+		41311	17004	27549	27561							0.1499554879040943
PKKLHAQAPA	10	Unmodified	_PKKLHAQAPA_					0	0	0			REV__ENSG00000196743|ENST00000357164|GM2A	REV__ENSG00000196743|ENST00000357164|GM2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8211669921875	2	530.816733	1059.61891	-0.81982	-0.00043517	3.8396	0.0020381	3.0198	0.0016029	531.3179945463662	84.982	1.0952	84.982	84.395	85.49	0					45	24	2	0	0	0	0.85694	1	8040	8040		21.96	2.5999	1	216850	+		41312	23168	27550	27562	47019	47019					0.091488443254093
PKKLKKRFYDY	11	Unmodified	_PKKLKKRFYDY_					0	0	0			REV__nc|ENSG00000049759|Q96PU5-9|NEDD4L	REV__nc|ENSG00000049759|Q96PU5-9|NEDD4L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.95758056640625	3	495.9574	1484.85037	-0.74563	-0.0003698	3.6739	0.0018221	2.9283	0.0014523	495.95916322713595	102.89	1.4225	102.89	101.69	103.11	0					83	35	3	0	0	0	0.79476	1	10422	10422		12.433	0.50046	1	402120	+		41313	16372	27551	27563	47020	47020					0.12733847236472684
PKKLNTRKNT	10	Unmodified	_PKKLNTRKNT_					0	0	0			REV__ENST00000555391.5_1_14:104201493-104210315:-|nuORF	REV__ENST00000555391.5_1_14:104201493-104210315:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5807189941406	3	400.578811	1198.7146	3.1807	0.0012741	1.1216	0.00044928	4.3022	0.0017234	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.86207	1	12635	12635		24.232	3.3947	1	88404	+		41314	16946	27552	27564	47021	47021					0.12319572445653648
PKKLPGDD	8	Unmodified	_PKKLPGDD_					0	0	0		nc|ENSG00000130396|P55196-6|AFDN;nc|ENSG00000130396|P55196-2|AFDN;nc|ENSG00000130396|P55196-3|AFDN;nc|ENSG00000130396|P55196-1|AFDN;nc|ENSG00000130396|P55196|AFDN;ENSG00000130396|ENST00000683244|AFDN;nc|ENSG00000130396|P55196-5|AFDN	nc|ENSG00000130396|P55196-6|AFDN	nc|ENSG00000130396|P55196-6|AFDN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2394104003906	2	435.239993	868.465432	-1.6534	-0.00071961	2.2013	0.0009581	0.54795	0.00023849	435.240689021295	28.601	0.50809	28.67	28.42	28.928	0.06868					58	25	4	0	0	0	0.90983	1	1186	1186		42.396	4.5846	1	211980			41315	14905	27553	27565	47022	47022					0.025938094890875618
PKKLRHLL	8	Unmodified	_PKKLRHLL_					0	0	0		ENST00000201979.2_1_20:30064033-30064156:+|nuORF	ENST00000201979.2_1_20:30064033-30064156:+|nuORF	ENST00000201979.2_1_20:30064033-30064156:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	502.81396484375	2	502.840011	1003.66547	-0.081013	-4.0737E-05	-4.1507	-0.0020871	-4.2317	-0.0021279	502.8373542417765	97.095	0.3772	97.143	96.914	97.291	0.048119					12	8	2	0	0	0	0.4196	1	10294	10294		3.9852	0	1	84676			41316	9095	27554	27566	47023	47023					0.16378328947359932
PKKLTVNE	8	Unmodified	_PKKLTVNE_					0	0	0			REV__nc|ENSG00000132256|Q9C035-4|TRIM5	REV__nc|ENSG00000132256|Q9C035-4|TRIM5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.5763854980469	2	464.776742	927.538931	-0.17002	-7.9022E-05	-0.16939	-7.8728E-05	-0.33941	-0.00015775	464.77630163676037	20.233	0.72495	19.604	19.351	20.076	-0.6296					20	15	2	0	0	0	0.4196	1	612	612		37.159	8.0096	1	68495	+		41317	18988	27555	27567	47024	47024					0.07226357931563143
PKKMIIRA	8	Unmodified	_PKKMIIRA_					0	0	0		ENSG00000173517|ENST00000682557|PEAK1	ENSG00000173517|ENST00000682557|PEAK1	ENSG00000173517|ENST00000682557|PEAK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80621337890625	2	478.807322	955.600092	0.18646	8.928E-05	-3.0807	-0.001475	-2.8942	-0.0013858	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.84341	1	2668	2668		24.203	3.7209	1	371600			41318	6863	27556	27568	47025	47025					0.12051591430019926
PKKQPTKKVYI	11	Unmodified	_PKKQPTKKVYI_					0	0	0			REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	444.2451171875	3	443.946612	1328.81801	1.4406	0.00063954	-0.14358	-6.3741E-05	1.297	0.0005758	444.28014218655926	107.13	0.24806	107.24	107.16	107.41	0.10396					8	6	2	0	0	0	0.17289	1	13059	13059		34.087	22.632	1	77880	+		41319	21450	27557	27569	47026	47026					0.1667505983348292
PKKQPTKKVYI	11	Unmodified	_PKKQPTKKVYI_					0	0	0			REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	443.946612	1328.81801	-0.15005	-6.6614E-05	4.5436	0.0020171	4.3936	0.0019505	443.9485328740729	107.37	0.97102	107.33	106.82	107.79	-0.034409	0.057399	0.00065238	NaN	34.087	77	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	982910	+		41320	21450	27557	27569							0.1667505983348292
PKKQPTKKVYI	11	Unmodified	_PKKQPTKKVYI_					0	0	0			REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	443.946612	1328.81801	2.7406	0.0012167	1.6372	0.00072682	4.3778	0.0019435	443.9472428465366	107.29	1.0617	107.25	106.7	107.77	-0.034134	-0.024707	-0.0032185	NaN	34.087	87	24	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1147600	+		41321	21450	27557	27569							0.1667505983348292
PKKQPTKKVYI	11	Unmodified	_PKKQPTKKVYI_					0	0	0			REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	443.946612	1328.81801	1.7105	0.00075937	2.614	0.0011605	4.3245	0.0019199	443.94768037528456	107.1	1.1934	107.13	106.63	107.82	0.035622	-0.14467	-0.0019175	NaN	34.087	98	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1167500	+		41322	21450	27557	27569							0.1667505983348292
PKKQPTKKVYI	11	Unmodified	_PKKQPTKKVYI_					0	0	0			REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	443.946612	1328.81801	-1.3526	-0.0006005	5.7604	0.0025573	4.4078	0.0019568	443.9490816338937	106.98	1.3433	107.12	106.55	107.89	0.13866	-0.15381	0.002273	NaN	34.087	119	32	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2092000	+		41323	21450	27557	27569							0.1667505983348292
PKKQVPVGKP	10	Unmodified	_PKKQVPVGKP_					0	0	0			REV__nc|ENSG00000277399|Q6PRD1|GPR179	REV__nc|ENSG00000277399|Q6PRD1|GPR179	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.64404296875	2	539.342584	1076.67061	0.79326	0.00042784	3.3611	0.0018128	4.1543	0.0022406	539.3462315867737	23.956	0.28891	23.958	23.806	24.094	0.0018959					17	13	3	0	0	0	0.37624	1	774	774		9.7057	0	1	57830	+		41324	24024	27558	27570	47027	47027					0.13534588019342664
PKKRGSSASA	10	Unmodified	_PKKRGSSASA_					0	0	0		nc|ENSG00000150551|Q8N2G4-4|LYPD1;ENSG00000150551|ENST00000397463|LYPD1;nc|ENSG00000150551|Q8N2G4-3|LYPD1;nc|ENSG00000150551|Q8N2G4-2|LYPD1	nc|ENSG00000150551|Q8N2G4-4|LYPD1	nc|ENSG00000150551|Q8N2G4-4|LYPD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7808532714844	2	494.780348	987.546142	-0.98597	-0.00048784	1.2423	0.00061469	0.25638	0.00012685	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.8651	1	8319	8319		25.574	2.5316	1	385180			41325	5071	27559	27571	47028	47028					0.05187090532001548
PKKRGSSASA	10	Unmodified	_PKKRGSSASA_					0	0	0		nc|ENSG00000150551|Q8N2G4-4|LYPD1;ENSG00000150551|ENST00000397463|LYPD1;nc|ENSG00000150551|Q8N2G4-3|LYPD1;nc|ENSG00000150551|Q8N2G4-2|LYPD1	nc|ENSG00000150551|Q8N2G4-4|LYPD1	nc|ENSG00000150551|Q8N2G4-4|LYPD1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.780517578125	2	494.780348	987.546142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.643	1	86.792	86.292	87.292	0.14902								0	0	0	0.45132	1	8531	8531		34.173	2.2177	1				41326	5071	27559	27571	47029	47029					0.05187090532001548
PKKRKKWLKE	10	Unmodified	_PKKRKKWLKE_					0	0	0		ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12	ENSG00000126464|ENST00000418929|PRR12	ENSG00000126464|ENST00000418929|PRR12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.76141357421875	3	447.622351	1339.84522	1.3153	0.00058875	-2.7481	-0.0012301	-1.4328	-0.00064136	447.9532616428093	23.745	0.33951	23.171	22.965	23.304	-0.57415					15	7	3	0	0	0	0.37624	1	1064	1064		14.694	0	1	39160			41327	3455	27560	27572	47030	47030					0.18889588164506677
PKKRRLLL	8	Unmodified	_PKKRRLLL_					0	0	0			REV__nc|ENSG00000105290|P51693|APLP1	REV__nc|ENSG00000105290|P51693|APLP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.3604736328125	2	512.361111	1022.70767	-0.052808	-2.7057E-05	0.34006	0.00017423	0.28725	0.00014718	512.3611914628581	74.266	1.3455	74.309	74.086	75.431	0.0429					113	47	3	0	0	0	0.86294	1	7157	7157		8.8223	0	1	281850	+		41328	17525	27561	27573	47031	47031					0.1972230435574147
PKKRRLLL	8	Unmodified	_PKKRRLLL_					0	0	0			REV__nc|ENSG00000105290|P51693|APLP1	REV__nc|ENSG00000105290|P51693|APLP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.361083984375	2	512.361111	1022.70767	-0.13841	-7.0915E-05	0.35065	0.00017966	0.21225	0.00010875	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.85787	1	7290	7290		9.4706	0.64823	1	293160	+		41329	17525	27561	27573	47032	47032					0.1972230435574147
PKKRSRASRAP	11	Unmodified	_PKKRSRASRAP_					0	0	0		chr21:46162067-46168372|48|16.42|0.54|4.94|-|0|SPATC1L,None|1	chr21:46162067-46168372|48|16.42|0.54|4.94|-|0|SPATC1L,None|1	chr21:46162067-46168372|48|16.42|0.54|4.94|-|0|SPATC1L,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3861083984375	2	627.381094	1252.74764	0.97949	0.00061452	0.64728	0.00040609	1.6268	0.0010206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.72106	1	12932	12932		28.081	3.5623	1	19815000			41330	377	27562	27574	47033	47033					0.13137199288371448
PKKRSRASRAP	11	Unmodified	_PKKRSRASRAP_					0	0	0		chr21:46162067-46168372|48|16.42|0.54|4.94|-|0|SPATC1L,None|1	chr21:46162067-46168372|48|16.42|0.54|4.94|-|0|SPATC1L,None|1	chr21:46162067-46168372|48|16.42|0.54|4.94|-|0|SPATC1L,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8864135742188	2	627.381094	1252.74764	6.5831	0.0041301	-4.1836	-0.0026247	2.3995	0.0015054	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.68532	1	13774	13774		33.922	9.4024	1	94412			41331	377	27562	27574	47034	47034					0.13137199288371448
PKKRVDAHE	9	Unmodified	_PKKRVDAHE_					0	0	0			REV__ENSG00000180043|ENST00000424985|GARIN5B	REV__ENSG00000180043|ENST00000424985|GARIN5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.3017578125	2	540.301447	1078.58834	0.044559	2.4075E-05	2.548	0.0013767	2.5926	0.0014008	540.3021594373678	24.358	0.8342	23.976	23.407	24.241	-0.38178					27	18	2	0	0	0	0.58668	1	1153	1153		47.657	1.7054	1	211490	+		41332	22375	27563	27575	47035	47035					0.052190659403549944
PKKSKEKSAS	10	Unmodified	_PKKSKEKSAS_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.317138671875	2	545.316763	1088.61897	0.15577	8.4944E-05	-0.048112	-2.6236E-05	0.10766	5.8708E-05	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.82886	1	9094	9094		37.812	4.9991	1	17220000	+		41333	18336	27564	27576	47036	47036					0.07820799534761136
PKKSLLSKV	9	Unmodified	_PKKSLLSKV_					0	0	0		ENSG00000154767|ENST00000285021|XPC;nc|ENSG00000154767|Q01831-2|XPC;nc|ENSG00000154767|Q01831-3|XPC	ENSG00000154767|ENST00000285021|XPC	ENSG00000154767|ENST00000285021|XPC	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	499.8244323730469	2	500.331685	998.648816	0.083893	4.1974E-05	-3.1822	-0.0015922	-3.0983	-0.0015502	500.8295653173474	21.036	0.21484	21.112	20.944	21.159	0.075848					13	10	2	0	0	0	0.20789	1	557	557		14.865	8.9438	1	38078			41334	5295	27565	27577	47037	47037					0.1494378327075765
PKKVKIIWTP	10	Unmodified	_PKKVKIIWTP_					0	0	0			REV__ENSG00000157680|ENST00000614521|DGKI	REV__ENSG00000157680|ENST00000614521|DGKI	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.8922119140625	2	605.389534	1208.76451	0.40196	0.00024334	-0.027211	-1.6473E-05	0.37475	0.00022687	605.3896161561632	44.898	1.0755	44.947	44.415	45.49	0.048996					49	25	3	0	0	0	0.8583	1	3198	3198		17.468	12.562	1	269720	+		41335	20558	27566	27578	47038	47038					0.16848307121586004
PKKYELRVIIW	11	Unmodified	_PKKYELRVIIW_					0	0	0		nc|ENSG00000115155|Q9HC10-5|OTOF;ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-2|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.2936096191406	3	482.294012	1443.86021	0.85471	0.00041222	-3.1098	-0.0014998	-2.255	-0.0010876	482.2922144182275	16.759	0.31462	16.272	16.098	16.412	-0.48718					20	6	4	0	0	0	0.7896	1	186	186		13.508	0.55046	1	94225			41336	2814;14858	27567	27579	47039	47039					0.1560303524183837
PKKYFPIPV	9	Unmodified	_PKKYFPIPV_					0	0	0		nc|ENSG00000132334|P23469-3|PTPRE;nc|ENSG00000132334|P23469-2|PTPRE;ENSG00000132334|ENST00000254667|PTPRE	nc|ENSG00000132334|P23469-3|PTPRE	nc|ENSG00000132334|P23469-3|PTPRE	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.8304443359375	2	544.828778	1087.643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.064	1	37.55	37.05	38.05	0.48581								0	0	0	0.31472	1	2969	2969		25.45	1.2474	1				41337	3783	27568	27580	47040	47040					0.10268684759057578
PKLDRHIIR	9	Unmodified	_PKLDRHIIR_					0	0	0			REV__ENST00000519733.5_1_8:42128977-42166452:+|nuORF	REV__ENST00000519733.5_1_8:42128977-42166452:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3570556640625	2	574.356557	1146.69856	1.1071	0.0006359	-2.2805	-0.0013098	-1.1733	-0.0006739	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.77696	1	10802	10802		31.53	3.6476	1	708140	+		41338	17451	27569	27581	47041	47041					0.13107910999406158
PKLDRYIIGLR	11	Unmodified	_PKLDRYIIGLR_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.6087951660156	3	448.610111	1342.8085	-1.2776	-0.00057316	-0.41856	-0.00018777	-1.6962	-0.00076093	448.94413867923083	73.921	0.80068	74.309	73.983	74.784	0.38779					42	19	3	0	0	0	0.74771	1	8329	8329		22.562	1.5294	1	382160	+		41339	19491	27570	27582	47042	47042					0.15081291547926412
PKLFALRDVIS	11	Unmodified	_PKLFALRDVIS_					0	0	0		ENSG00000163521|ENST00000295759|GLB1L;nc|ENSG00000163521|Q6UWU2-2|GLB1L	ENSG00000163521|ENST00000295759|GLB1L	ENSG00000163521|ENST00000295759|GLB1L	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2549133300781	3	420.255446	1257.74451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.98	1	111.96	111.46	112.46	-0.019882								0	0	0	0.56276	1	11925	11925		24.232	2.4514	1				41340	5815	27571	27583	47043	47043					0.12594511390989283
PKLFRGKMV	9	Unmodified	_PKLFRGKMV_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.327880859375	2	538.325879	1074.63721	-1.4902	-0.00080221	3.9394	0.0021207	2.4492	0.0013185	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12804	12804		17.365	0.89182	1	4041000			41341	7862	27572	27584	47044	47044					0.10287262975771228
PKLKGKPSRE	10	Unmodified	_PKLKGKPSRE_					0	0	0		ENSG00000078401|ENST00000379375|EDN1	ENSG00000078401|ENST00000379375|EDN1	ENSG00000078401|ENST00000379375|EDN1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	570.3981323242188	2	570.348397	1138.68224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.629	1	76.629	76.129	77.129	0								0	0	0	0.45132	1	6985	6985		21.96	1.013	1				41342	1398	27573	27585	47045	47045					0.11844785042649164
PKLKTDVLVLS	11	Unmodified	_PKLKTDVLVLS_					0	0	0		nc|ENSG00000070785|Q9NR50-3|EIF2B3;nc|ENSG00000070785|Q9NR50-2|EIF2B3;ENSG00000070785|ENST00000360403|EIF2B3	nc|ENSG00000070785|Q9NR50-3|EIF2B3	nc|ENSG00000070785|Q9NR50-3|EIF2B3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.9228515625	3	404.923585	1211.74892	0.44861	0.00018165	-2.1475	-0.00086959	-1.6989	-0.00068793	404.92260093832465	26.168	1.321	26.213	25.795	27.116	0.045507					105	39	4	0	0	0	0.77205	1	1072	1072		17.167	1.16	1	304530			41343	1252	27574	27586	47046	47046					0.15151975813864738
PKLLILPLT	9	Unmodified	_PKLLILPLT_					0	0	0			REV__ENST00000393779.2_1_3:17913403-17913661:-|nuORF	REV__ENST00000393779.2_1_3:17913403-17913661:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3450927734375	2	504.346803	1006.67905	0.11336	5.7171E-05	-3.112	-0.0015695	-2.9987	-0.0015124	504.3451867946114	55.153	1.8423	55.554	54.023	55.866	0.40101					89	43	3	0	0	0	0.7932	1	5668	5668		21.96	2.5999	1	1856800	+		41344	26063	27575	27587	47047	47047					0.17598141935934564
PKLLLGKDRK	10	Unmodified	_PKLLLGKDRK_					0	0	0		ENSG00000126653|ENST00000247026|NSRP1	ENSG00000126653|ENST00000247026|NSRP1	ENSG00000126653|ENST00000247026|NSRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	584.3851928710938	2	584.38224	1166.74993	1.0454	0.00061092	-1.4613	-0.00085397	-0.41592	-0.00024306	584.3814542384844	15.568	0.26376	15.544	15.417	15.681	-0.024207					13	7	3	0	0	0	0.86471	1	54	54		30.318	2.4355	1	84036			41345	3459	27576	27588	47048	47048					0.1732223497342602
PKLLPGPL	8	Unmodified	_PKLLPGPL_					0	0	0		ENST00000540534.5_1_20:62271485-62272211:-|nuORF	ENST00000540534.5_1_20:62271485-62272211:-|nuORF	ENST00000540534.5_1_20:62271485-62272211:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.2974548339844	2	417.776014	833.537475	-0.73015	-0.00030504	0.13349	5.577E-05	-0.59666	-0.00024927	417.7752831996185	72.15	0.12903	72.11	72.009	72.138	-0.04039					8	5	2	0	0	0	0.4196	1	7034	7034		20.482	12.251	1	21228			41346	13498	27577	27589	47049	47049					0.11404768633474305
PKLQKKNQKPS	11	Unmodified	_PKLQKKNQKPS_					0	0	0		ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A;ENST00000574934.5_1_17:4442712-4445225:-|nuORF;ENST00000574547.5_1_17:4442712-4447986:-|nuORF	ENSG00000132382|ENST00000254718|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.59771728515625	3	432.597983	1294.77212	-0.16983	-7.3466E-05	0.49269	0.00021314	0.32286	0.00013967	432.59814834944257	107.38	0.9445	107.34	106.95	107.89	-0.034409					44	22	2	0	0	0	0.74763	1	11638	11638		20.315	0.68808	1	14888000			41347	3789	27578	27590	47050	47050					0.13652414651210165
PKLQSTKRFI	10	Unmodified	_PKLQSTKRFI_					0	0	0		ENSG00000145824|ENST00000512158|CXCL14;nc|ENSG00000145824|O95715|CXCL14	ENSG00000145824|ENST00000512158|CXCL14	ENSG00000145824|ENST00000512158|CXCL14	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5846862792969	3	406.583674	1216.72919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.93	1	111.97	111.47	112.47	0.041832								0	0	0	0.45132	1	13538	13538		26.063	0.9374	1				41348	4796	27579	27591	47051	47051					0.12949644593800258
PKLRILRK	8	Unmodified	_PKLRILRK_					0	0	0		ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-3|TYMS;chr18:657947-669072|60|39.88|0.94|5.41|+|ENST00000323250|TYMS,TYMS;nc|ENSG00000176890|P04818-2|TYMS;ENSG00000176890|ENST00000323274|TYMS	ENST00000581920.1_1_18:667730-672994:+|nuORF	ENST00000581920.1_1_18:667730-672994:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.3607177734375	2	512.361111	1022.70767	-0.13841	-7.0915E-05	0.35065	0.00017966	0.21225	0.00010875	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.81548	1	7281	7281		20.482	5.8177	1	293160			41349	258	27580	27592	47052	47052					0.1972230435574147
PKLRILRK	8	Unmodified	_PKLRILRK_					0	0	0		ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-3|TYMS;chr18:657947-669072|60|39.88|0.94|5.41|+|ENST00000323250|TYMS,TYMS;nc|ENSG00000176890|P04818-2|TYMS;ENSG00000176890|ENST00000323274|TYMS	ENST00000581920.1_1_18:667730-672994:+|nuORF	ENST00000581920.1_1_18:667730-672994:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.3607788085938	2	512.361111	1022.70767	-0.36988	-0.00018951	0.50559	0.00025904	0.13571	6.9531E-05	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.86288	1	7189	7189		26.796	6.3143	1	304520			41350	258	27580	27592	47053	47053					0.1972230435574147
PKLSGRHRIV	10	Unmodified	_PKLSGRHRIV_					0	0	0		nc|ENSG00000145246|Q9P241-2|ATP10D;ENSG00000145246|ENST00000273859|ATP10D	nc|ENSG00000145246|Q9P241-2|ATP10D	nc|ENSG00000145246|Q9P241-2|ATP10D	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	581.87890625	2	581.862006	1161.70946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.13	1	23.183	22.683	23.683	0.05291								0	0	0	0.45132	1	722	722		25.574	6.4705	1				41351	4759	27581	27593	47054	47054					0.13507313373679608
PKLSLRFAS	9	Unmodified	_PKLSLRFAS_					0	0	0			REV__nc|ENSG00000106701|Q9BXM9-2|FSD1L	REV__nc|ENSG00000106701|Q9BXM9-2|FSD1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8046569824219	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.7932	1	8308	8308		26.693	3.6504	1	2989000	+		41352	17626	27582	27594	47055	47055					0.08902039576832976
PKLSSDIV	8	Unmodified	_PKLSSDIV_					0	0	0		nc|ENSG00000163820|Q9BQS8-3|FYCO1;nc|ENSG00000163820|Q9BQS8-2|FYCO1;ENSG00000163820|ENST00000296137|FYCO1;nc|ENSG00000163820|Q9BQS8-4|FYCO1	nc|ENSG00000163820|Q9BQS8-3|FYCO1	nc|ENSG00000163820|Q9BQS8-3|FYCO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.7505187988281	2	429.750193	857.485833	-1.7422	-0.0007487	2.3085	0.00099207	0.56632	0.00024338	429.7510562737313	35.44	2.4929	35.471	35.255	37.748	0.031132					176	69	3	0	0	0	0.89962	1	1956	1956		38.806	3.1879	1	1409200			41353	5871	27583	27595	47056	47056					0.051389801488994635
PKLTALPKRQ	10	Unmodified	_PKLTALPKRQ_					0	0	0		ENST00000602414.5_1_4:119199974-119200130:+|nuORF	ENST00000602414.5_1_4:119199974-119200130:+|nuORF	ENST00000602414.5_1_4:119199974-119200130:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3693237304688	2	576.36659	1150.71863	0.16825	9.6976E-05	3.9929	0.0023014	4.1612	0.0023984	576.3687345088138	44.787	1.7768	44.718	44.033	45.809	-0.06863					89	43	3	0	0	0	0.82886	1	3303	3303		37.812	6.2817	1	271250			41354	14404	27584	27596	47057	47057					0.14929661939368088
PKLTTPSSSL	10	Unmodified	_PKLTTPSSSL_					0	0	0			REV__ENST00000442011.6_1_5:135379800-135382117:+|nuORF	REV__ENST00000442011.6_1_5:135379800-135382117:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3059692382812	2	515.792589	1029.57063	-0.87713	-0.00045242	-0.7961	-0.00041062	-1.6732	-0.00086304	515.7932442957724	62.347	0.55645	62.375	62.218	62.775	0.028133					37	26	2	0	0	0	0.37624	1	5832	5832		18.262	0	1	68092	+		41355	26765	27585	27597	47058	47058					0.057023058948516336
PKMAIRIPT	9	Unmodified	_PKMAIRIPT_					0	0	0		nc|ENSG00000230453|A2A2Z9|ANKRD18B;chr9:33541227-33543182|32|16.91|0.48|5.14|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33528841-33529000|31|33.26|0.67|5.62|+|ENST00000290943|ANKRD18B,ANKRD18B;chr9:33524695-33528727|25|25.92|0.53|5.6|+|ENST00000290943|ANKRD18B,ANKRD18B;ENSG00000230453|ENST00000684830|ANKRD18B;chr9:33567314-33568671|22|13.18|0.48|4.79|+|ENST00000465094|ANKRD18B,ANKRD18B;chr9:33568893-33571246|23|13.57|0.51|4.74|+|ENST00000357927|ANKRD18B,ANKRD18B;chr9:33566500-33567103|25|14.4|0.67|4.42|+|ENST00000357927|ANKRD18B,ANKRD18B;chr9:33558187-33566219|24|13.08|0.39|5.06|+|ENST00000357927|ANKRD18B,ANKRD18B;chr9:33555820-33558058|23|12.65|0.44|4.83|+|ENST00000357927|ANKRD18B,ANKRD18B;chr9:33550579-33555708|24|16.17|0.39|5.38|+|ENST00000357927|ANKRD18B,ANKRD18B;chr9:33548855-33550430|22|16.32|0.48|5.1|+|ENST00000357927|ANKRD18B,ANKRD18B	nc|ENSG00000230453|A2A2Z9|ANKRD18B	nc|ENSG00000230453|A2A2Z9|ANKRD18B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8087158203125	2	513.810062	1025.60557	0.34332	0.0001764	-2.5254	-0.0012976	-2.182	-0.0011212	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.7932	1	3707	3707		25.574	1.3713	1	1306000			41356	530	27586	27598	47059	47059					0.09379270221802471
PKMLANIHTQS	11	Unmodified	_PKMLANIHTQS_					0	0	0		ENSG00000171501|ENST00000373688|OR1N2	ENSG00000171501|ENST00000373688|OR1N2	ENSG00000171501|ENST00000373688|OR1N2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9324951171875	3	413.888657	1238.64414	0.21932	9.0773E-05	-3.2753	-0.0013556	-3.056	-0.0012648	413.88708639035013	43.69	0.24867	43.747	43.596	43.845	0.056747					7	5	2	0	0	0	0.17422	1	3043	3043		22.781	11.327	1	53990			41357	6674	27587	27599	47060	47060					0.03436531065676718
PKMLANIHTQS	11	Unmodified	_PKMLANIHTQS_					0	0	0		ENSG00000171501|ENST00000373688|OR1N2	ENSG00000171501|ENST00000373688|OR1N2	ENSG00000171501|ENST00000373688|OR1N2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	413.888657	1238.64414	-0.33564	-0.00013892	-2.5409	-0.0010516	-2.8765	-0.0011906	413.88762753575287	43.717	0.40089	43.66	43.473	43.874	-0.057396	-0.069535	0.00027522	NaN	12.763	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103350			41358	6674	27587	27599							0.03436531065676718
PKMVGKPV	8	Unmodified	_PKMVGKPV_					0	0	0		ENST00000511906.5_1_5:37379391-37721408:+|nuORF;ENSG00000082068|ENST00000265107|WDR70	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.1888427734375	2	428.259674	854.504795	1.3415	0.00057451	3.3266	0.0014246	4.6681	0.0019992	428.2610149260504	92.782	1.3895	93.229	92.689	94.079	0.44662					58	32	2	0	0	0	0.4196	1	11143	11143		28.254	1.4582	1	403560			41359	1477	27588	27600	47061	47061					0.07172238238979389
PKMVGKPV	8	Unmodified	_PKMVGKPV_					0	0	0		ENST00000511906.5_1_5:37379391-37721408:+|nuORF;ENSG00000082068|ENST00000265107|WDR70	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	428.259674	854.504795	-1.1018	-0.00047184	5.6348	0.0024132	4.533	0.0019413	428.2620137384197	93.372	1.6703	93.372	92.981	94.652	0	0.18544	0.0010802	NaN	20.482	99	38	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	625770			41360	1477	27588	27600							0.07172238238979389
PKMVGKPV	8	Unmodified	_PKMVGKPV_					0	0	0		ENST00000511906.5_1_5:37379391-37721408:+|nuORF;ENSG00000082068|ENST00000265107|WDR70	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	428.259674	854.504795	-0.17853	-7.6457E-05	4.7055	0.0020152	4.527	0.0019387	428.2616311113302	93.215	1.668	93.285	92.884	94.552	0.06987	0.098528	0.00028431	NaN	20.482	106	39	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	971470			41361	1477	27588	27600							0.07172238238979389
PKMVGKPV	8	Unmodified	_PKMVGKPV_					0	0	0		ENST00000511906.5_1_5:37379391-37721408:+|nuORF;ENSG00000082068|ENST00000265107|WDR70	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	428.259674	854.504795	1.6946	0.00072573	2.7585	0.0011814	4.4531	0.0019071	428.26078573024404	93.12	2.2977	93.059	92.591	94.889	-0.061432	-0.12784	-0.0013834	NaN	20.482	125	54	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1024200			41362	1477	27588	27600							0.07172238238979389
PKMVGKPV	8	Unmodified	_PKMVGKPV_					0	0	0		ENST00000511906.5_1_5:37379391-37721408:+|nuORF;ENSG00000082068|ENST00000265107|WDR70	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	428.259674	854.504795	2.6338	0.001128	1.8431	0.00078931	4.4769	0.0019173	428.2603552628774	92.992	2.1642	93.038	92.582	94.746	0.045456	-0.14883	-0.0021674	NaN	20.482	120	51	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	945500			41363	1477	27588	27600							0.07172238238979389
PKMVGKPV	8	Unmodified	_PKMVGKPV_					0	0	0		ENST00000511906.5_1_5:37379391-37721408:+|nuORF;ENSG00000082068|ENST00000265107|WDR70	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	428.259674	854.504795	-1.6616	-0.00071161	6.1315	0.0026259	4.4698	0.0019143	428.2622094565239	92.89	1.4529	93.116	92.662	94.115	0.22547	-0.070959	0.0015057	NaN	20.482	95	34	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	919150			41364	1477	27588	27600							0.07172238238979389
PKMVGKPV	8	Unmodified	_PKMVGKPV_					0	0	0		ENST00000511906.5_1_5:37379391-37721408:+|nuORF;ENSG00000082068|ENST00000265107|WDR70	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	428.259674	854.504795	0.66517	0.00028486	3.7996	0.0016272	4.4647	0.0019121	428.2612082247364	93.072	2.1566	93.23	92.624	94.78	0.15875	0.043809	-0.00049167	NaN	20.482	104	51	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	830050			41365	1477	27588	27600							0.07172238238979389
PKMVGKPV	8	Unmodified	_PKMVGKPV_					0	0	0		ENST00000511906.5_1_5:37379391-37721408:+|nuORF;ENSG00000082068|ENST00000265107|WDR70	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	428.259674	854.504795	-1.8497	-0.00079216	6.2784	0.0026888	4.4286	0.0018966	428.2622696629903	92.909	1.5961	93.102	92.52	94.116	0.19239	-0.085024	0.0016315	NaN	20.482	96	37	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	799470			41366	1477	27588	27600							0.07172238238979389
PKMVGKPV	8	Oxidation (M)	_PKM(Oxidation (M))VGKPV_		PKM(1)VGKPV		PKM(41)VGKPV	0	0	1		ENST00000511906.5_1_5:37379391-37721408:+|nuORF;ENSG00000082068|ENST00000265107|WDR70	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	ENST00000511906.5_1_5:37379391-37721408:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.7740478515625	2	436.257131	870.499709	1.5609	0.00068097	0.81662	0.00035625	2.3775	0.0010372	436.25734656680345	27.656	1.2229	27.401	26.855	28.078	-0.25465					36	28	2	0	0	0	0.4196	1	1679	1679		40.573	21.213	1	63531			41367	1477	27588	27601	47062	47062		28			0.059279343763591896
PKPALSAK	8	Unmodified	_PKPALSAK_					0	0	0		ENSG00000058335|ENST00000558480|RASGRF1;nc|ENSG00000058335|Q13972|RASGRF1	ENSG00000058335|ENST00000558480|RASGRF1	ENSG00000058335|ENST00000558480|RASGRF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25762939453125	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.81567	1	3889	3889		14.865	0	1	334920			41368	1043	27589	27602	47063	47063					0.08351007593978466
PKPAVPPPTK	10	Unmodified	_PKPAVPPPTK_					0	0	0			REV__ENSG00000166317|ENST00000394810|SYNPO2L;REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	REV__ENSG00000166317|ENST00000394810|SYNPO2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.314453125	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.8651	1	12541	12541		25.574	1.3713	1	4038100	+		41369	21279;21829	27590	27603	47064	47064					0.10343210236624145
PKPGAKRL	8	Unmodified	_PKPGAKRL_					0	0	0		ENSG00000171847|ENST00000538603|FAM90A1;nc|ENSG00000205879|Q658T7-2|FAM90A2P;nc|ENSG00000205879|Q658T7|FAM90A2P;ENSG00000229924|ENST00000512047|FAM90A26	ENSG00000171847|ENST00000538603|FAM90A1	ENSG00000171847|ENST00000538603|FAM90A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7802429199219	2	433.782162	865.549771	0.28843	0.00012512	-3.8544	-0.001672	-3.566	-0.0015469	433.78110763255734	50.946	4.0891	50.995	50.343	54.432	0.049896					422	122	5	0	0	0	0.79929	1	4261	4261		18.324	3.6603	1	4871400			41370	6718	27591	27604	47065	47065					0.11161805096514854
PKPGELAFR	9	Unmodified	_PKPGELAFR_					0	0	0		nc|ENSG00000007264|P42679-3|MATK;ENSG00000007264|ENST00000310132|MATK;nc|ENSG00000007264|P42679-2|MATK	nc|ENSG00000007264|P42679-3|MATK	nc|ENSG00000007264|P42679-3|MATK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2799987792969	2	507.790184	1013.56581	1.3329	0.00067683	-1.5753	-0.00079994	-0.24245	-0.00012311	507.78741298222155	87.994	0.17501	87.92	87.811	87.986	-0.074005					5	3	2	0	0	0	0.20789	1	9127	9127		26.693	10.22	1	13357			41371	723	27592	27605	47066	47066					0.059574665427589935
PKPGLKRA	8	Unmodified	_PKPGLKRA_					0	0	0		ENST00000455528.5_1_21:34941370-34944872:+|nuORF	ENST00000455528.5_1_21:34941370-34944872:+|nuORF	ENST00000455528.5_1_21:34941370-34944872:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.78057861328125	2	433.782162	865.549771	-1.7067	-0.00074033	-2.7555	-0.0011953	-4.4622	-0.0019356	433.7819459773158	51.312	5.3307	51.312	50.734	56.065	0					552	155	5	0	0	0	0.80706	2	4567	4567;4574		19.36	1.0356	1	1514200			41372	11952	27593	27606	47067;47068	47067					0.11161805096503485
PKPGLKRA	8	Unmodified	_PKPGLKRA_					0	0	0		ENST00000455528.5_1_21:34941370-34944872:+|nuORF	ENST00000455528.5_1_21:34941370-34944872:+|nuORF	ENST00000455528.5_1_21:34941370-34944872:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7796325683594	2	433.782162	865.549771	-1.6363	-0.0007098	-1.3557	-0.00058806	-2.9919	-0.0012979	433.78173283497773	54.776	0.31876	54.832	54.614	54.933	0.055611					12	8	2	0	0	0	0.4196	1	4539	4539		31.955	23.724	1	57641			41373	11952	27593	27606	47069	47069					0.11161805096503485
PKPGLKRA	8	Unmodified	_PKPGLKRA_					0	0	0		ENST00000455528.5_1_21:34941370-34944872:+|nuORF	ENST00000455528.5_1_21:34941370-34944872:+|nuORF	ENST00000455528.5_1_21:34941370-34944872:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77960205078125	2	433.782162	865.549771	-1.6453	-0.00071369	-0.35792	-0.00015526	-2.0032	-0.00086896	433.78196453372414	49.331	1.4545	49.356	48.76	50.214	0.025574					81	36	3	0	0	0	0.4196	1	3741	3741		12.207	8.5225	1	4178800			41374	11952	27593	27606	47070	47070					0.11161805096503485
PKPGLKRA	8	Unmodified	_PKPGLKRA_					0	0	0		ENST00000455528.5_1_21:34941370-34944872:+|nuORF	ENST00000455528.5_1_21:34941370-34944872:+|nuORF	ENST00000455528.5_1_21:34941370-34944872:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7803955078125	2	433.782162	865.549771	0.28843	0.00012512	-3.8544	-0.001672	-3.566	-0.0015469	433.78110763255734	50.946	4.0891	50.995	50.343	54.432	0.049896					422	122	5	0	0	0	0.83646	1	4392	4392		12.207	3.3845	1	4871400			41375	11952	27593	27606	47071	47071					0.11161805096503485
PKPHLLAVAE	10	Unmodified	_PKPHLLAVAE_					0	0	0			REV__ENST00000360214.7_1_21:40194879-40195008:+|nuORF	REV__ENST00000360214.7_1_21:40194879-40195008:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8074340820312	2	537.818941	1073.62333	0.92044	0.00049503	-1.7704	-0.00095218	-0.85001	-0.00045715	537.8177302513359	90.929	0.89217	91.379	90.697	91.589	0.45016					28	21	2	0	0	0	0.37624	1	10683	10683		19.104	4.2386	1	148910	+		41376	25471	27594	27607	47072	47072					0.08946308748318188
PKPHLLAVAE	10	Unmodified	_PKPHLLAVAE_					0	0	0			REV__ENST00000360214.7_1_21:40194879-40195008:+|nuORF	REV__ENST00000360214.7_1_21:40194879-40195008:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	537.818941	1073.62333	-1.6164	-0.00086935	0.45187	0.00024302	-1.1646	-0.00062632	537.8190839893493	90.921	0.80586	91.391	91.009	91.815	0.47068	0.0062332	0.00098331	NaN	24.519	30	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146930	+		41377	25471	27594	27607							0.08946308748318188
PKPHRKPSSSA	11	Unmodified	_PKPHRKPSSSA_					0	0	0		nc|ENSG00000258436|Q7Z5J4-2|RAI1;ENSG00000108557|ENST00000353383|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3330078125	2	596.333279	1190.652	-0.50602	-0.00030176	-0.30093	-0.00017945	-0.80695	-0.00048121	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.67778	1	10175	10175		35.152	2.4015	1	1259900			41378	2417	27595	27608	47073	47073					0.06430426377482945
PKPILTVIA	9	Unmodified	_PKPILTVIA_					0	0	0			REV__L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|65|3|sense	REV__L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|65|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.3177795410156	2	476.315503	950.616454	0.26049	0.00012407	1.2092	0.00057595	1.4697	0.00070002	476.31581076832725	43.149	0.93245	43.206	42.87	43.802	0.056744					29	22	2	0	0	0	0.7932	1	2984	2984		18.324	0.95945	1	103480	+		41379	29471	27596	27609	47074	47074					0.13916995867748483
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8698120117188	2	634.378355	1266.74216	-0.13876	-8.8026E-05	-2.2894	-0.0014523	-2.4281	-0.0015404	634.3767849583303	112.54	0.33102	112.48	112.42	112.75	-0.063889					18	10	2	0	0	0	0.86444	1	12244	12244		14.865	0	1	250970			41380	14941	27597	27610	47075	47075					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3739013671875	2	634.378355	1266.74216	-0.13788	-8.7468E-05	-1.9646	-0.0012463	-2.1025	-0.0013338	634.3771360107617	113.13	0.47948	113.07	112.78	113.26	-0.067215					34	19	3	0	0	0	0.85251	1	12294	12294		19.997	3.2794	1	68253			41381	14941	27597	27610	47076	47076					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3763427734375	2	634.378355	1266.74216	-0.13776	-8.7389E-05	-1.5851	-0.0010056	-1.7229	-0.001093	634.3771594108364	117.84	0.45279	117.77	117.69	118.15	-0.07531					44	17	3	0	0	0	0.85958	1	12680	12680		15.642	0.77694	1	1053300			41382	14941	27597	27610	47077	47077					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3767700195312	2	634.378355	1266.74216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.01	1	118.93	118.43	119.43	-0.07531								0	0	0	0.45132	1	12766	12766		32.812	8.2932	1				41383	14941	27597	27610	47078	47078					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3773193359375	2	634.378355	1266.74216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.31	1	119.23	118.73	119.73	-0.07531								0	0	0	0.45132	1	12793	12793		20.947	0.95016	1				41384	14941	27597	27610	47079	47079					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3776245117188	2	634.378355	1266.74216	1.3188	0.00083664	-2.8412	-0.0018024	-1.5224	-0.00096577	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.80179	16	12783	12580;12592;12633;12663;12682;12726;12765;12783;12811;12849;12895;12908;12986;13048;13060;13108		39.253	10.233	1	12917000			41385	14941	27597	27610	47080;47081;47082;47083;47084;47085;47086;47087;47088;47089;47090;47091;47092;47093;47094;47095	47087					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3770751953125	2	634.378355	1266.74216	1.4924	0.00094672	-4.0921	-0.002596	-2.5998	-0.0016492	634.3756362582708	111.65	0.59207	111.76	111.45	112.04	0.11118					53	17	5	0	0	0	0.85934	1	12045	12045		35.618	2.8059	1	27955000			41386	14941	27597	27610	47096	47096					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.376953125	2	634.378355	1266.74216	1.4896	0.00094496	-3.6734	-0.0023303	-2.1838	-0.0013854	634.3759273521912	119	0.20064	119.09	119.04	119.24	0.087753					12	7	2	0	0	0	0.86718	1	12529	12529		27.882	3.3631	1	2529600			41387	14941	27597	27610	47097	47097					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3763427734375	2	634.378355	1266.74216	0.93365	0.00059228	-3.0131	-0.0019114	-2.0794	-0.0013191	634.3762780737788	111.26	0.49553	111.33	110.97	111.47	0.069542					38	19	2	0	0	0	0.85251	1	11972	11972		19.997	0.89325	1	1383700			41388	14941	27597	27610	47098	47098					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3767700195312	2	634.378355	1266.74216	0.93394	0.00059247	-3.1872	-0.0020219	-2.2532	-0.0014294	634.3760615979032	111.89	0.64575	111.96	111.47	112.12	0.069542					57	19	4	0	0	0	0.86471	1	12060	12060		30.318	4.7437	1	7169800			41389	14941	27597	27610	47099	47099					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3764038085938	2	634.378355	1266.74216	0.93391	0.00059245	-3.1661	-0.0020085	-2.2322	-0.0014161	634.3762099028429	112.22	0.2012	112.29	112.11	112.31	0.066025					17	6	3	0	0	0	0.6116	1	12090	12090		49.442	10.189	1	745330			41390	14941	27597	27610	47100	47100					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3764038085938	2	634.378355	1266.74216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.62	1	114.68	114.18	115.18	0.061073								0	0	0	0.45132	1	12252	12252		25.574	1.3713	1				41391	14941	27597	27610	47101	47101					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3760375976562	2	634.378355	1266.74216	-1.1774	-0.00074694	-0.32217	-0.00020438	-1.4996	-0.00095132	634.3776223317757	111.13	0.41051	111.12	110.9	111.31	-0.0074387					40	17	3	0	0	0	0.86763	1	11845	11845		26.693	2.1737	1	240410			41392	14941	27597	27610	47102	47102					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3710327148438	2	634.378355	1266.74216	-1.1773	-0.00074688	-1.0177	-0.00064561	-2.195	-0.0013925	634.3774291341157	112.05	1.1748	112.03	111.8	112.98	-0.019882					84	36	4	0	0	0	0.67571	4	11918	11918;11989;12012;12039		45.972	4.5456	1	22589000			41393	14941	27597	27610	47103;47104;47105;47106	47103					0.11945520496556128
PKPKRGRRSW	10	Unmodified	_PKPKRGRRSW_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-4|KLF4;ENST00000497048.5_1_9:110248034-110250560:-|nuORF	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	634.378355	1266.74216	1.3144	0.00083382	-3.9439	-0.0025019	-2.6295	-0.0016681	634.3758415759962	112.23	0.14008	112.26	112.22	112.36	0.028854	-0.061322	-0.00030956	NaN	49.442	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	791380			41394	14941	27597	27610							0.11945520496556128
PKPLHKVVVC	10	Unmodified	_PKPLHKVVVC_					0	0	0		ENSG00000163781|ENST00000260810|TOPBP1;ENST00000506779.1_1_3:133347204-133347562:-|nuORF	ENSG00000163781|ENST00000260810|TOPBP1	ENSG00000163781|ENST00000260810|TOPBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3402709960938	2	560.338987	1118.66342	-1.1265	-0.00063122	3.9894	0.0022354	2.8629	0.0016042	560.3411024675651	107.34	0.71041	107.3	106.95	107.66	-0.034409					44	16	3	0	0	0	0.86589	1	11653	11653		29.15	2.4566	1	686070			41395	5861	27598	27611	47107	47107					0.1088353214727249
PKPLKAPPKP	10	Unmodified	_PKPLKAPPKP_					0	0	0			REV__ENST00000596242.5_1_19:4325153-4327208:-|nuORF	REV__ENST00000596242.5_1_19:4325153-4327208:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1661376953125	2	536.847502	1071.68045	-0.096645	-5.1883E-05	0.23055	0.00012377	0.13391	7.1888E-05	537.3496910735112	20.981	0.096703	21.027	21.001	21.098	0.045401					6	4	2	0	0	0	0.37624	1	539	539		26.693	0	1	48780	+		41396	22252	27599	27612	47108	47108					0.14747776024682935
PKPLSLTL	8	Unmodified	_PKPLSLTL_					0	0	0		ENST00000486091.1_1_1:55203206-55207183:+|nuORF	ENST00000486091.1_1_1:55203206-55207183:+|nuORF	ENST00000486091.1_1_1:55203206-55207183:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7804870605469	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.80706	1	2423	2423		19.36	1.995	1	8013100			41397	12571	27600	27613	47109	47109					0.10388447425270897
PKPPRPLLDAG	11	Unmodified	_PKPPRPLLDAG_					0	0	0			REV__ENST00000402918.6_1_22:37766984-37767089:-|nuORF	REV__ENST00000402918.6_1_22:37766984-37767089:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.841064453125	2	580.842948	1159.67134	-0.88113	-0.0005118	-3.3252	-0.0019314	-4.2063	-0.0024432	580.8408357600173	69.895	0.91608	69.925	69.626	70.542	0.030502					112	46	3	0	0	0	0.66929	1	6643	6643		36.447	3.6343	1	15247000	+		41398	26268	27601	27614	47110	47110					0.09789382668373037
PKPQARGPLR	10	Unmodified	_PKPQARGPLR_					0	0	0		ENST00000311601.5_1_5:171764580-171764949:-|nuORF	ENST00000311601.5_1_5:171764580-171764949:-|nuORF	ENST00000311601.5_1_5:171764580-171764949:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.342529296875	2	560.340907	1118.66726	3.1454	0.0017625	-4.1604	-0.0023312	-1.015	-0.00056875	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.86272	1	12871	12871		24.519	4.5224	1	151040			41399	9931	27602	27615	47111	47111					0.11267337965296065
PKPRAVNVAFL	11	Unmodified	_PKPRAVNVAFL_					0	0	0		ENSG00000180902|ENST00000321264|D2HGDH;nc|ENSG00000180902|Q8N465-2|D2HGDH;nc|ENSG00000180902|Q8N465-3|D2HGDH;ENST00000436747.5_1_2:242681986-242688401:+|nuORF	ENSG00000180902|ENST00000321264|D2HGDH	ENSG00000180902|ENST00000321264|D2HGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	606.3698120117188	2	606.36659	1210.71863	1.0648	0.00064567	3.7089	0.0022489	4.7737	0.0028946	606.3686977940384	94.008	3.2437	94.236	93.32	96.564	0.22863					196	77	3	0	0	0	0.76322	1	9624	9624		19.104	0.77911	1	863300			41400	7357	27603	27616	47112	47112					0.12169661939356047
PKPRSKSN	8	Unmodified	_PKPRSKSN_					0	0	0		ENSG00000109686|ENST00000604030|SH3D19	ENSG00000109686|ENST00000604030|SH3D19	ENSG00000109686|ENST00000604030|SH3D19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2633972167969	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.8621	1	7467	7467		26.693	1.2427	1	1329900			41401	2477	27604	27617	47113	47113					0.05435722848858404
PKPTELYL	8	Unmodified	_PKPTELYL_					0	0	0			REV__ENSG00000221878|ENST00000406070|PSG7	REV__ENSG00000221878|ENST00000406070|PSG7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.7713317871094	2	480.773668	959.532783	-0.89304	-0.00042935	-3.1972	-0.0015371	-4.0903	-0.0019665	480.77199336465685	41.06	0.54614	41.064	40.845	41.391	0.0043983					32	19	2	0	0	0	0.87479	1	2670	2670		30.504	0.18592	1	358340	+		41402	23711	27605	27618	47114	47114					0.05139839700041193
PKPYITINN	9	Unmodified	_PKPYITINN_					0	0	0		ENSG00000204941|ENST00000342951|PSG5;ENST00000600817.5_1_19:43679971-43690557:-|nuORF;nc|ENSG00000124467|Q9UQ74-2|PSG8;nc|ENSG00000231924|P11464-3|PSG1;nc|ENSG00000124467|Q9UQ74-3|PSG8;ENSG00000231924|ENST00000436291|PSG1;nc|ENSG00000231924|P11464-4|PSG1;ENSG00000124467|ENST00000306511|PSG8;nc|ENSG00000231924|P11464-2|PSG1;ENSG00000221826|ENST00000327495|PSG3;ENSG00000221878|ENST00000406070|PSG7;ENST00000599226.2_1_19:43430578-43430863:-|nuORF	ENSG00000204941|ENST00000342951|PSG5;ENSG00000221826|ENST00000327495|PSG3;ENSG00000221878|ENST00000406070|PSG7	ENSG00000204941|ENST00000342951|PSG5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2933349609375	2	530.295299	1058.57605	-0.034361	-1.8221E-05	-3.4792	-0.001845	-3.5136	-0.0018632	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.76255	1	9294	9294		35.618	2.8059	1	1852900			41403	8499;8669;8676	27606	27619	47115	47115					0.04910029477309763
PKQGRAPK	8	Unmodified	_PKQGRAPK_					0	0	0			REV__ENSG00000184897|ENST00000333762|H1-10	REV__ENSG00000184897|ENST00000333762|H1-10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.2106018066406	2	441.269419	880.524284	-0.15966	-7.0454E-05	-0.024973	-1.102E-05	-0.18464	-8.1474E-05	441.2698352320821	63.297	0.77139	63.264	62.759	63.531	-0.033714					49	34	2	0	0	0	0.4196	1	6023	6023		6.7355	0	1	73939	+		41404	22708	27607	27620	47116	47116					0.07924330574076066
PKQIFRVKTT	10	Unmodified	_PKQIFRVKTT_					0	0	0		nc|ENSG00000138741|Q13507-3|TRPC3;ENSG00000138741|ENST00000379645|TRPC3;nc|ENSG00000069018|Q9HCX4-2|TRPC7;nc|ENSG00000069018|Q9HCX4-3|TRPC7;ENSG00000069018|ENST00000513104|TRPC7	nc|ENSG00000138741|Q13507-3|TRPC3	nc|ENSG00000138741|Q13507-3|TRPC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.58380126953125	3	406.583674	1216.72919	-1.7909	-0.00072813	2.626	0.0010677	0.83517	0.00033957	406.5846406101276	111.69	0.38136	111.8	111.59	111.97	0.11118					29	11	3	0	0	0	0.86802	1	12042	12042		27.047	2.8155	1	6428000			41405	4324	27608	27621	47117	47117					0.12949644593800258
PKQLFYTT	8	Unmodified	_PKQLFYTT_					0	0	0			REV__ENSG00000257365|ENST00000246166|FNTB	REV__ENSG00000257365|ENST00000246166|FNTB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	499.2738037109375	2	499.271293	996.528032	-1.7639	-0.00088068	2.3239	0.0011603	0.56001	0.0002796	499.27219649148446	31.598	0.49176	31.598	31.353	31.845	0					30	18	2	0	0	0	0.884	1	1525	1525		33.516	4.366	1	51983	+		41406	23920	27609	27622	47118	47118					0.029629555572796562
PKQLFYTT	8	Unmodified	_PKQLFYTT_					0	0	0			REV__ENSG00000257365|ENST00000246166|FNTB	REV__ENSG00000257365|ENST00000246166|FNTB	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	499.271293	996.528032	-1.7639	-0.00088068	2.3239	0.0011603	0.56001	0.0002796	499.27219649148446	31.598	0.49176	31.598	31.353	31.845	0	0	0	NaN	33.516	30	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51983	+		41407	23920	27609	27622							0.029629555572796562
PKQSLQKTKT	10	Unmodified	_PKQSLQKTKT_					0	0	0		ENSG00000268988|ENST00000598475|SPANXN2	ENSG00000268988|ENST00000598475|SPANXN2	ENSG00000268988|ENST00000598475|SPANXN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	579.8440551757812	2	579.845687	1157.67682	0.88069	0.00051066	-3.7088	-0.0021505	-2.8281	-0.0016399	579.843435527032	102.18	1.0887	102.31	101.93	103.02	0.13523					81	26	4	0	0	0	0.86047	1	10757	10757		23.523	4.4192	1	2076300			41408	8964	27610	27623	47119	47119					0.10429061460172306
PKQSPDLVLLR	11	Unmodified	_PKQSPDLVLLR_					0	0	0			REV__nc|ENSG00000182149|P53990-3|IST1	REV__nc|ENSG00000182149|P53990-3|IST1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.38671875	2	633.382437	1264.75032	0.40056	0.00025371	3.544	0.0022447	3.9445	0.0024984	633.3845856694247	49.392	1.5439	49.392	48.662	50.206	0.00061798					56	34	2	0	0	0	0.74405	1	4219	4219		9.1829	0	1	166300	+		41409	30077	27611	27624	47120	47120					0.12853609902640528
PKQWKAAH	8	Unmodified	_PKQWKAAH_					0	0	0		ENST00000400585.6_1_22:18032552-18032675:+|nuORF	ENST00000400585.6_1_22:18032552-18032675:+|nuORF	ENST00000400585.6_1_22:18032552-18032675:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.72808837890625	2	483.269419	964.524284	-0.11458	-5.5371E-05	-1.4766	-0.0007136	-1.5912	-0.00076897	483.2684738339803	74.556	0.61037	74.947	74.706	75.317	0.3911					20	14	2	0	0	0	0.4196	1	8401	8401		25.45	0	1	96621			41410	11227	27612	27625	47121	47121					0.040603305740773976
PKRAKVAP	8	Unmodified	_PKRAKVAP_					0	0	0			REV__ENSG00000185823|ENST00000329468|NPAP1	REV__ENSG00000185823|ENST00000329468|NPAP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.25579833984375	2	433.782162	865.549771	1.8231	0.00079084	2.2409	0.00097207	4.0641	0.0017629	433.7834840736021	107.04	0.14482	107.14	107.02	107.16	0.10396					6	3	2	0	0	0	0.4196	1	13045	13045		14.664	0	1	276460	+		41411	22798	27613	27626	47122	47122					0.11161805096503485
PKRAKVAP	8	Unmodified	_PKRAKVAP_					0	0	0			REV__ENSG00000185823|ENST00000329468|NPAP1	REV__ENSG00000185823|ENST00000329468|NPAP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	433.782162	865.549771	4.7954	0.0020802	4.9126	0.002131	9.708	0.0042112	433.78396331375774	107.03	0.46983	107.18	106.99	107.46	0.14929	0.020585	0.0011482	NaN	14.664	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	320120	+		41412	22798	27613	27626							0.11161805096503485
PKREKASKKQ	10	Unmodified	_PKREKASKKQ_					0	0	0			REV__ENSG00000163394|ENST00000295589|CCKAR	REV__ENSG00000163394|ENST00000295589|CCKAR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.5804443359375	3	400.578811	1198.7146	0.73408	0.00029406	3.5327	0.0014151	4.2667	0.0017092	400.5800545644303	111.89	0.61595	111.96	111.53	112.15	0.069542					52	18	4	0	0	0	0.86549	2	12027	12027;12061		29.551	3.6694	1	4655100	+		41413	20910	27614	27627	47123;47124	47123					0.12319572445653648
PKREKASKKQ	10	Unmodified	_PKREKASKKQ_					0	0	0			REV__ENSG00000163394|ENST00000295589|CCKAR	REV__ENSG00000163394|ENST00000295589|CCKAR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5809631347656	3	400.578811	1198.7146	3.4037	0.0013634	1.0118	0.0004053	4.4155	0.0017688	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.85285	1	13752	13752		16.717	0	1	5321000	+		41414	20910	27614	27627	47125	47125					0.12319572445653648
PKREKPRTRWL	11	Unmodified	_PKREKPRTRWL_					0	0	0		L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|99|3|sense	L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|99|3|sense	L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|99|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.62823486328125	3	489.628276	1465.863	0.18918	9.2628E-05	-1.4344	-0.00070232	-1.2452	-0.00060969	489.62759995350746	16.963	0.38765	16.476	16.327	16.714	-0.48665					15	8	3	0	0	0	0.75457	1	200	200		21.032	1.7696	1	120500			41415	14556	27615	27628	47126	47126					0.14870303419343145
PKREKRPRLPR	11	Unmodified	_PKREKRPRLPR_					0	0	0		ENSG00000169592|ENST00000563197|INO80E;ENST00000569957.5_1_16:30012641-30012857:+|nuORF;ENST00000562441.5_1_16:30012641-30015954:+|nuORF	ENSG00000169592|ENST00000563197|INO80E	ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.6375427246094	3	478.303904	1431.88988	0.47685	0.00022808	-2.4226	-0.0011588	-1.9458	-0.00093068	478.3025280059543	66.964	1.0029	67.09	66.677	67.68	0.12649					108	40	3	0	0	0	0.79945	1	5945	5945		11.455	1.3507	1	331170			41416	6507	27616	27629	47127	47127					0.1912141203054034
PKRFQNIFTT	10	Unmodified	_PKRFQNIFTT_					0	0	0		ENSG00000175294|ENST00000312106|CATSPER1;ENST00000529244.1_1_11:65786354-65788652:-|nuORF	ENSG00000175294|ENST00000312106|CATSPER1	ENSG00000175294|ENST00000312106|CATSPER1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3795166015625	2	626.345855	1250.67716	-0.23272	-0.00014576	3.6512	0.0022869	3.4184	0.0021411	626.3479933826022	106.1	0.20502	106.07	105.97	106.18	-0.025146					7	4	2	0	0	0	0.37624	1	11499	11499		18.262	0	1	101130			41417	7005	27617	27630	47128	47128					0.061844811800028765
PKRGRKKPI	9	Unmodified	_PKRGRKKPI_					0	0	0			REV__ENSG00000146285|ENST00000369020|SCML4	REV__ENSG00000146285|ENST00000369020|SCML4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.3628540039062	2	540.361642	1078.70873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.508	1	44.449	43.949	44.949	-0.058262								0	0	0	0.36148	1	3140	3140		11.511	0	1		+		41418	20006	27618	27631	47129	47129					0.17252518724649235
PKRILLTTFW	10	Unmodified	_PKRILLTTFW_					0	0	0			REV__ENST00000360299.9_1_12:56383841-56384496:+|nuORF	REV__ENST00000360299.9_1_12:56383841-56384496:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.3853149414062	2	637.884616	1273.75468	1.5425	0.00098395	2.0268	0.0012929	3.5693	0.0022768	638.3874919188061	112.2	0.89179	112.3	112.09	112.98	0.10638					58	36	3	0	0	0	0.37624	1	12124	12124		10.265	0.5596	1	14018000	+		41419	25475	27619	27632	47130	47130					0.12875119116210954
PKRIRDDTTL	10	Unmodified	_PKRIRDDTTL_					0	0	0			REV__ENSG00000131781|ENST00000254090|FMO5	REV__ENSG00000131781|ENST00000254090|FMO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.564697265625	3	405.566571	1213.67788	-0.18878	-7.6562E-05	-4.1815	-0.0016959	-4.3703	-0.0017724	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.86409	1	5918	5918		25.126	3.3456	1	257140	+		41420	18966	27620	27633	47131	47131					0.0795927582908007
PKRKNYAGSK	10	Unmodified	_PKRKNYAGSK_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.2899169921875	2	574.830372	1147.64619	0.1826	0.00010496	1.3689	0.00078687	1.5515	0.00089184	574.8306019848732	16.223	0.18595	15.624	15.508	15.694	-0.59873					5	3	2	0	0	0	0.37624	1	109	109		17.468	0	1	36264			41421	2794	27621	27634	47132	47132					0.07827327865788902
PKRLLPIRSRN	11	Unmodified	_PKRLLPIRSRN_					0	0	0			REV__nc|ENSG00000205238|Q495Y8-2|SPDYE2	REV__nc|ENSG00000205238|Q495Y8-2|SPDYE2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2740478515625	3	450.621122	1348.84154	1.3108	0.00059066	2.0009	0.00090163	3.3116	0.0014923	450.62297151560614	93.092	0.20187	93.137	93.038	93.239	0.045456					5	4	2	0	0	0	0.18216	1	9749	9749		14.086	5.2867	1	28995	+		41422	21942	27622	27635	47133	47133					0.18106918390640203
PKRPLSAE	8	Unmodified	_PKRPLSAE_					0	0	0		ENST00000426595.1_1_7:55955154-55973975:+|nuORF	ENST00000426595.1_1_7:55955154-55973975:+|nuORF	ENST00000426595.1_1_7:55955154-55973975:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.26007080078125	2	449.261259	896.507966	-0.031705	-1.4244E-05	-1.4161	-0.00063622	-1.4478	-0.00065046	449.26046135217877	71.325	1.0336	71.873	71.284	72.317	0.54756					58	24	3	0	0	0	0.884	1	8020	8020		33.516	1.5607	1	1233100			41423	11556	27623	27636	47134	47134					0.055572046173210765
PKRPRKRR	8	Unmodified	_PKRPRKRR_					0	0	0		ENSG00000099901|ENST00000430524|RANBP1	ENSG00000099901|ENST00000430524|RANBP1	ENSG00000099901|ENST00000430524|RANBP1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	547.3599243164062	2	547.362508	1092.71046	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.22	1	111.21	110.71	111.71	-0.0074387								0	0	0	0.29452	1	11856	11856		33.516	19.74	1				41424	1775	27624	27637	47135	47135					0.16781572533250255
PKRRRWRQPRI	11	Unmodified	_PKRRRWRQPRI_					0	0	0		ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3014526367188	3	516.986798	1547.93856	0.11535	5.9632E-05	-3.4852	-0.0018018	-3.3699	-0.0017422	516.9847866654513	64.25	0.36101	64.216	63.938	64.299	-0.034256					11	9	2	0	0	0	0.18372	1	6129	6129		3.4087	0.38274	1	37725			41425	9696	27625	27638	47136	47136					0.18651325390305828
PKRSIALPKQN	11	Unmodified	_PKRSIALPKQN_					0	0	0			REV__ENSG00000178177|ENST00000635767|LCORL	REV__ENSG00000178177|ENST00000635767|LCORL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.9223327636719	3	417.922578	1250.7459	2.409	0.0010068	-3.2333	-0.0013513	-0.82426	-0.00034448	417.9211491012133	105.29	1.9486	105.45	104.96	106.91	0.15584					170	67	4	0	0	0	0.74771	1	12856	12856		22.562	4.0305	1	526200	+		41426	22262	27626	27639	47137	47137					0.1305614547973164
PKRVKHSH	8	Unmodified	_PKRVKHSH_					0	0	0			REV__ENST00000564629.1_1_16:31469444-31469618:-|nuORF	REV__ENST00000564629.1_1_16:31469444-31469618:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7925109863281	2	494.793592	987.572632	-0.22625	-0.00011195	-1.0513	-0.00052017	-1.2775	-0.00063211	494.7928986334224	26.563	0.76746	26.524	26.237	27.004	-0.038525					33	17	3	0	0	0	0.86288	1	1214	1214		26.796	0	1	99666	+		41427	28841	27627	27640	47138	47138					0.07834824213989577
PKRVPGPSKKN	11	Unmodified	_PKRVPGPSKKN_					0	0	0			REV__ENSG00000115183|ENST00000263635|TANC1	REV__ENSG00000115183|ENST00000263635|TANC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.24688720703125	3	403.247173	1206.71969	-1.7912	-0.0007223	1.0466	0.00042203	-0.74462	-0.00030027	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.74763	1	11113	11113		20.315	3.1483	1	20673000	+		41428	18091	27628	27641	47139	47139					0.12459876308275852
PKRYVEEPL	9	Unmodified	_PKRYVEEPL_					0	0	0			REV__ENSG00000147234|ENST00000683843|FRMPD3	REV__ENSG00000147234|ENST00000683843|FRMPD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.2977294921875	2	565.813856	1129.61316	0.58732	0.00033231	1.7464	0.00098816	2.3338	0.0013205	566.316527566363	78.763	0.46547	79.326	79.079	79.544	0.56332					13	10	2	0	0	0	0.20789	1	9025	9025		37.159	1.5408	1	100260	+		41429	20061	27629	27642	47140	47140					0.05353701023091162
PKSAILVP	8	Unmodified	_PKSAILVP_					0	0	0		nc|ENSG00000078018|P11137-3|MAP2;ENSG00000078018|ENST00000682079|MAP2;nc|ENSG00000078018|P11137-2|MAP2;nc|ENSG00000078018|P11137-4|MAP2	nc|ENSG00000078018|P11137-3|MAP2;nc|ENSG00000078018|P11137-4|MAP2	nc|ENSG00000078018|P11137-4|MAP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2668151855469	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.89494	1	2697	2697		37.159	2.9866	1	795210			41430	1389;14783	27630	27643	47141	47141					0.0979217825380374
PKSKAPKKP	9	Unmodified	_PKSKAPKKP_					0	0	0			REV__ENST00000489701.5_1_20:35154375-35155431:+|nuORF	REV__ENST00000489701.5_1_20:35154375-35155431:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.81524658203125	2	490.816202	979.617851	-0.10843	-5.3222E-05	-1.1394	-0.00055921	-1.2478	-0.00061244	490.8155078618727	72.986	0.65971	73.54	73.191	73.851	0.55386					31	16	3	0	0	0	0.7932	1	8193	8193		23.042	1.0826	1	939560	+		41431	16811	27631	27644	47142	47142					0.127226299565109
PKSKKRLFRKF	11	Unmodified	_PKSKKRLFRKF_					0	0	0			REV__ENSG00000112562|ENST00000356284|SMOC2	REV__ENSG00000112562|ENST00000356284|SMOC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.30560302734375	3	478.973384	1433.89832	0.41435	0.00019846	1.9079	0.00091386	2.3223	0.0011123	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.79716	1	5085	5085		11.932	3.1331	1	131420	+		41432	17953	27632	27645	47143	47143					0.19872965947138255
PKSKRITWFRK	11	Unmodified	_PKSKRITWFRK_					0	0	0			REV__chr9:14179780-14306752|17|69.82|0.0|15.25|-|1|NFIB,None|1	REV__chr9:14179780-14306752|17|69.82|0.0|15.25|-|1|NFIB,None|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	482.95953369140625	3	482.961256	1445.86194	-2.01	-0.00097073	-0.73399	-0.00035449	-2.744	-0.0013252	482.9607228885635	19.199	0.45232	19.199	18.987	19.439	0					36	14	3	0	0	0	0.74771	1	397	397		22.562	9.6041	1	100610	+		41433	15931	27633	27646	47144	47144					0.15684089050432704
PKSRAGHL	8	Unmodified	_PKSRAGHL_					0	0	0			REV__ENSG00000170265|ENST00000610704|ZNF282	REV__ENSG00000170265|ENST00000610704|ZNF282	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.2554931640625	2	433.253769	864.492984	-0.16825	-7.2895E-05	2.4391	0.0010568	2.2709	0.00098386	433.25555494708175	107.35	1.0528	107.31	106.77	107.82	-0.034409					102	24	6	0	0	0	0.89962	1	11667	11667		38.806	1.7777	1	61129000	+		41434	21641	27634	27647	47145	47145					0.05531757539984028
PKSRAGHL	8	Unmodified	_PKSRAGHL_					0	0	0			REV__ENSG00000170265|ENST00000610704|ZNF282	REV__ENSG00000170265|ENST00000610704|ZNF282	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.25396728515625	2	433.253769	864.492984	1.9992	0.00086615	-0.066458	-2.8793E-05	1.9327	0.00083736	433.25365732536335	111.6	0.52182	111.64	111.39	111.92	0.041832					37	17	3	0	0	0	0.89494	1	13512	13512		37.159	3.6435	1	623410	+		41435	21641	27634	27647	47146	47146					0.05531757539984028
PKSRAGHL	8	Unmodified	_PKSRAGHL_					0	0	0			REV__ENSG00000170265|ENST00000610704|ZNF282	REV__ENSG00000170265|ENST00000610704|ZNF282	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.2554931640625	2	433.253769	864.492984	1.9986	0.0008659	0.62983	0.00027288	2.6284	0.0011388	433.25386183757	112.22	0.92635	112.25	111.94	112.87	0.030602					62	35	2	0	0	0	0.86791	3	13604	13583;13592;13604		52.299	7.7681	1	560910	+		41436	21641	27634	27647	47147;47148;47149	47149					0.05531757539984028
PKSSFRIHRMR	11	Unmodified	_PKSSFRIHRMR_					0	0	0		nc|ENSG00000173068|Q6ZN30-2|BNC2;ENSG00000173068|ENST00000380672|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7938537597656	3	472.266462	1413.77756	-0.03806	-1.7974E-05	1.5728	0.00074279	1.5348	0.00072481	472.2666252368156	26.565	0.22682	26.389	26.25	26.477	-0.17559					6	4	2	0	0	0	0.17586	1	1469	1469		21.78	2.5177	1	25006			41437	6822	27635	27648	47150	47150					0.08721814962041208
PKSTEQTTTNS	11	Unmodified	_PKSTEQTTTNS_					0	0	0		nc|ENSG00000147050|O15550|KDM6A;ENSG00000147050|ENST00000611820|KDM6A	nc|ENSG00000147050|O15550|KDM6A	nc|ENSG00000147050|O15550|KDM6A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3295288085938	2	597.285857	1192.55716	-1.8779	-0.0011216	-3.9093	-0.002335	-5.7872	-0.0034566	597.2834939931256	42.014	0.59592	42.712	42.456	43.052	0.69754					32	14	3	0	0	0	0.17457	1	3700	3700		42.864	23.761	1	1199400			41438	4876	27636	27649	47151	47151					-0.03141596675027358
PKSVQLAS	8	Unmodified	_PKSVQLAS_					0	0	0			REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2445068359375	2	415.242535	828.470518	2.5965	0.0010782	2.9987	0.0012452	5.5952	0.0023234	415.2437470423347	107.1	0.79471	107.2	106.82	107.62	0.10395					75	27	5	0	0	0	0.87064	1	13089	13089		29.15	4.9468	1	2535100	+		41439	30005	27637	27650	47152	47152					0.04942113351705757
PKSWLVNP	8	Unmodified	_PKSWLVNP_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7686767578125	2	470.766178	939.517802	-1.9239	-0.00090572	1.9879	0.00093583	0.06397	3.0115E-05	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.89962	1	1473	1473		38.806	10.552	1	93177	+		41440	20437;29946	27638	27651	47153	47153					0.04562392622710831
PKTFQIIN	8	Unmodified	_PKTFQIIN_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8006896972656	2	480.779285	959.544017	0.73242	0.00035213	4.3462	0.0020896	5.0786	0.0024417	480.7815312465016	94.929	0.48383	95.092	94.949	95.433	0.16307					19	11	2	0	0	0	0.4196	1	9758	9758		21.96	3.6355	1	143180	+		41441	18431	27639	27652	47154	47154					0.06262661794175983
PKTGLLIIVLA	11	Unmodified	_PKTGLLIIVLA_					0	0	0		ENSG00000268606|ENST00000684311|MAGEA2;ENSG00000183305|ENST00000682532|MAGEA2B;ENSG00000213401|ENST00000393869|MAGEA12	ENSG00000268606|ENST00000684311|MAGEA2	ENSG00000268606|ENST00000684311|MAGEA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8531494140625	2	569.383917	1136.75328	-1.3891	-0.00079093	-4.2972	-0.0024467	-5.6863	-0.0032377	569.380857300382	102.15	0.38737	102.29	102.1	102.49	0.13569					11	9	2	0	0	0	0.17643	1	10688	10688		19.997	6.5427	1	145490			41442	7519	27640	27653	47155	47155					0.19037485027479306
PKTHAHEILT	10	Unmodified	_PKTHAHEILT_					0	0	0			REV__nc|ENSG00000119912|P14735-2|IDE	REV__nc|ENSG00000119912|P14735-2|IDE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.8162841796875	2	573.81693	1145.61931	-0.60731	-0.00034849	0.63185	0.00036256	0.024534	1.4078E-05	573.8171546436936	36.254	0.9932	36.198	35.788	36.781	-0.055904					58	21	4	0	0	0	0.77314	1	2386	2386		40.778	2.9666	1	727690	+		41443	18385	27641	27654	47156	47156					0.052322192545943835
PKTHRHRG	8	Unmodified	_PKTHRHRG_					0	0	0		ENSG00000163362|ENST00000413687|INAVA;nc|ENSG00000163362|Q3KP66|INAVA	ENSG00000163362|ENST00000413687|INAVA	ENSG00000163362|ENST00000413687|INAVA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7795715332031	2	494.781016	987.54748	-1.0037	-0.00049663	-0.68182	-0.00033735	-1.6856	-0.00083398	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.87922	1	8485	8485		31.955	1.4512	1	265620			41444	5788	27642	27655	47157	47157					0.053207694114121296
PKTILKGFN	9	Unmodified	_PKTILKGFN_					0	0	0			REV__nc|ENSG00000020922|P49959-2|MRE11	REV__nc|ENSG00000020922|P49959-2|MRE11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.30615234375	2	509.30821	1016.60187	-0.37346	-0.00019021	-4.2656	-0.0021725	-4.6391	-0.0023627	509.30591642174505	92.904	1.3737	93.13	92.62	93.993	0.22547					101	32	4	0	0	0	0.77696	1	9408	9408		31.53	3.6476	1	2213400	+		41445	16238	27643	27656	47158	47158					0.09422923719614573
PKTKGPRG	8	Unmodified	_PKTKGPRG_					0	0	0		ENST00000546023.1_1_6:160210088-160210586:-|nuORF	ENST00000546023.1_1_6:160210088-160210586:-|nuORF	ENST00000546023.1_1_6:160210088-160210586:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.75482177734375	2	420.756144	839.497735	-0.39386	-0.00016572	-1.7444	-0.00073398	-2.1383	-0.0008997	420.7553186920564	20.988	1.6049	20.924	19.96	21.565	-0.064743					109	65	2	0	0	0	0.84341	1	570	570		24.203	4.8428	1	83540			41446	13583	27644	27657	47159	47159					0.07156641682752252
PKTKLLCKHL	10	Unmodified	_PKTKLLCKHL_					0	0	0		ENST00000519187.5_2_8:133771681-133772790:-|nuORF;ENST00000519016.5_2_8:133771146-133772850:-|nuORF;ENST00000519304.1_2_8:133771146-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8672485351562	2	590.865369	1179.71618	-0.23931	-0.0001414	2.2964	0.0013569	2.0571	0.0012155	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.80179	1	10802	10802		39.253	5.0803	1	39787000			41447	13127	27645	27658	47160	47160					0.1335149021003872
PKTKLLCKHL	10	Unmodified	_PKTKLLCKHL_					0	0	0		ENST00000519187.5_2_8:133771681-133772790:-|nuORF;ENST00000519016.5_2_8:133771146-133772850:-|nuORF;ENST00000519304.1_2_8:133771146-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8668212890625	2	590.865369	1179.71618	0.84845	0.00050132	0.81922	0.00048405	1.6677	0.00098537	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.82886	1	11035	11035		37.812	0.65241	1	94771000			41448	13127	27645	27658	47161	47161					0.1335149021003872
PKTKLLCKHL	10	Unmodified	_PKTKLLCKHL_					0	0	0		ENST00000519187.5_2_8:133771681-133772790:-|nuORF;ENST00000519016.5_2_8:133771146-133772850:-|nuORF;ENST00000519304.1_2_8:133771146-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8665161132812	2	590.865369	1179.71618	0.89156	0.00052679	0.84938	0.00050187	1.7409	0.0010287	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.4892	1	10991	10991		56.721	10.749	1	84183000			41449	13127	27645	27658	47162	47162					0.1335149021003872
PKTKLLCKHL	10	Unmodified	_PKTKLLCKHL_					0	0	0		ENST00000519187.5_2_8:133771681-133772790:-|nuORF;ENST00000519016.5_2_8:133771146-133772850:-|nuORF;ENST00000519304.1_2_8:133771146-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8670654296875	2	590.865369	1179.71618	-1.319	-0.00077937	3.0876	0.0018243	1.7685	0.001045	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.80179	1	10991	10991		39.253	5.0803	1	81379000			41450	13127	27645	27658	47163	47163					0.1335149021003872
PKTLKENQFF	10	Unmodified	_PKTLKENQFF_					0	0	0		ENST00000517516.1_1_8:124262398-124279521:-|nuORF	ENST00000517516.1_1_8:124262398-124279521:-|nuORF	ENST00000517516.1_1_8:124262398-124279521:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3795166015625	2	626.340238	1250.66592	1.3729	0.00085992	1.7989	0.0011268	3.1719	0.0019867	626.3416456946753	105.14	0.41943	105.3	105.13	105.55	0.15924					20	10	3	0	0	0	0.37624	1	11184	11184		42.864	1.4377	1	396520			41451	13098	27646	27659	47164	47164					0.05061659085890824
PKTLNQLM	8	Unmodified	_PKTLNQLM_					0	0	0			REV__nc|ENSG00000154645|Q9H9P2-2|CHODL	REV__nc|ENSG00000154645|Q9H9P2-2|CHODL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7674560546875	2	472.76532	943.516088	0.74188	0.00035074	3.3813	0.0015986	4.1232	0.0019493	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.86677	1	8688	8688		27.882	2.3082	1	547170	+		41452	15783	27647	27660	47165	47165					0.04207015542442605
PKTPARGSGT	10	Unmodified	_PKTPARGSGT_					0	0	0		L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|71|2|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|71|2|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|71|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.2678527832031	2	486.267073	970.519593	0.080189	3.8993E-05	-0.13772	-6.6968E-05	-0.057528	-2.7974E-05	486.2668793256364	86.146	4.4086	86.59	84.867	89.275	0.44331					281	107	4	0	0	0	0.86272	1	10276	10276		24.519	0.31644	1	1279400			41453	14681	27648	27661	47166	47166					0.03315401640679738
PKTPARTLLAK	11	Unmodified	_PKTPARTLLAK_					0	0	0		nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000115266|O95996-3|APC2;ENSG00000115266|ENST00000590469|APC2	nc|ENSG00000115266|O95996-2|APC2	nc|ENSG00000115266|O95996-2|APC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3825073242188	2	598.379697	1194.74484	-0.19423	-0.00011622	3.3027	0.0019763	3.1085	0.00186	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.71207	1	3015	3015		29.551	6.0281	1	825320			41454	2826	27649	27662	47167	47167					0.15525931110846614
PKTPLKER	8	Unmodified	_PKTPLKER_					0	0	0		ENSG00000163870|ENST00000355552|TPRA1	ENSG00000163870|ENST00000355552|TPRA1	ENSG00000163870|ENST00000355552|TPRA1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.7986755371094	2	484.798009	967.581465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.094	1	16.153	15.653	16.653	0.059269								0	0	0	0.29344	1	109	109		31.955	0	1				41455	5874	27650	27663	47168	47168					0.09637753059803345
PKTPSHVMIKA	11	Unmodified	_PKTPSHVMIKA_					0	0	0			REV__ENST00000401044.7_1_1:59134235-59156019:-|nuORF	REV__ENST00000401044.7_1_1:59134235-59156019:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.8466186523438	2	604.844633	1207.67471	-0.26186	-0.00015838	2.8156	0.001703	2.5538	0.0015446	604.8462755020705	96.346	2.6632	96.346	95.357	98.02	0					132	61	3	0	0	0	0.75906	1	9574	9574		20.03	0.033703	1	263320	+		41456	20825	27651	27664	47169	47169					0.07918309450724337
PKTQCSLVL	9	Unmodified	_PKTQCSLVL_					0	0	0			REV__ENST00000552941.5_3_14:65528035-65528353:+|nuORF	REV__ENST00000552941.5_3_14:65528035-65528353:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.78045654296875	2	494.778428	987.542302	-0.3637	-0.00017995	4.2125	0.0020842	3.8488	0.0019043	494.78036117734723	86.114	3.3197	86.558	85.468	88.787	0.44331					170	80	3	0	0	0	0.7932	1	10073	10073		23.042	0	1	514260	+		41457	28634	27652	27665	47170	47170					0.048032847138983925
PKTRAAAGK	9	Unmodified	_PKTRAAAGK_					0	0	0		ENSG00000203499|ENST00000527139|IQANK1	ENSG00000203499|ENST00000527139|IQANK1	ENSG00000203499|ENST00000527139|IQANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2740783691406	2	450.274701	898.534849	0.91195	0.00041063	-0.64166	-0.00028892	0.27029	0.0001217	450.2741920951115	83.25	0.68932	83.309	82.984	83.673	0.05925					37	15	4	0	0	0	0.7932	1	8373	8373		24.519	0.31644	1	240020			41458	8387	27653	27666	47171	47171					0.08152313228504227
PKTRRQHRTWK	11	Unmodified	_PKTRRQHRTWK_					0	0	0		ENST00000257749.8_2_6:90718571-90798726:-|nuORF	ENST00000257749.8_2_6:90718571-90798726:-|nuORF	ENST00000257749.8_2_6:90718571-90798726:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.62176513671875	3	498.623525	1492.84875	0.21444	0.00010693	-1.0277	-0.00051244	-0.81326	-0.00040551	498.62281482057665	22.043	1.7711	21.6	20.78	22.551	-0.44324					90	40	3	0	0	0	0.74771	1	902	902		22.562	4.7284	1	200640			41459	9361	27654	27667	47172	47172					0.12203650991045834
PKTRVLWR	8	Unmodified	_PKTRVLWR_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.3280029296875	2	528.327268	1054.63998	-1.5179	-0.00080196	2.674	0.0014128	1.1561	0.0006108	528.328271416259	37.858	1.164	37.858	37.395	38.559	0					41	28	2	0	0	0	0.89043	1	2392	2392		35.618	10.044	1	386700	+		41460	20385;29943	27655	27668	47173	47173					0.11484854424929836
PKTSFGIK	8	Unmodified	_PKTSFGIK_					0	0	0		nc|ENSG00000176601|Q56UN5-3|MAP3K19;ENSG00000176601|ENST00000392915|MAP3K19	nc|ENSG00000176601|Q56UN5-3|MAP3K19	nc|ENSG00000176601|Q56UN5-3|MAP3K19	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	439.26263427734375	2	439.260728	876.506903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.26	1	112.33	111.83	112.83	0.066025								0	0	0	0.29871	1	12098	12098		23.042	0	1				41461	7090	27656	27669	47174	47174					0.06370990248433372
PKTSPVPKVTI	11	Unmodified	_PKTSPVPKVTI_					0	0	0		nc|ENSG00000130518|Q9H0B3-5|IQCN;nc|ENSG00000130518|Q9H0B3|IQCN;ENSG00000130518|ENST00000392413|IQCN;nc|ENSG00000130518|Q9H0B3-2|IQCN	nc|ENSG00000130518|Q9H0B3-5|IQCN	nc|ENSG00000130518|Q9H0B3-5|IQCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	583.8585815429688	2	583.860806	1165.70706	-1.3418	-0.00078345	-1.8522	-0.0010814	-3.1941	-0.0018649	583.8594781261362	98.555	2.0612	98.751	98.2	100.26	0.19585					97	47	4	0	0	0	0.72739	1	10162	10162		27.047	0	1	828850			41462	3650	27657	27670	47175	47175					0.13083420125371958
PKTSRTLEQ	9	Unmodified	_PKTSRTLEQ_					0	0	0		ENSG00000154175|ENST00000471714|ABI3BP;nc|ENSG00000154175|Q7Z7G0|ABI3BP	ENSG00000154175|ENST00000471714|ABI3BP	ENSG00000154175|ENST00000471714|ABI3BP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2930297851562	2	530.293288	1058.57202	-1.2396	-0.00065735	1.1575	0.00061382	-0.082084	-4.3529E-05	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.78912	1	10699	10699		28.081	0	1	1818700			41463	5260	27658	27671	47176	47176					0.04507939983614051
PKTTAKTK	8	Unmodified	_PKTTAKTK_					0	0	0		ENST00000252934.9_1_22:46238891-46238939:+|nuORF	ENST00000252934.9_1_22:46238891-46238939:+|nuORF	ENST00000252934.9_1_22:46238891-46238939:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77130126953125	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.80959	1	2911	2911		15.642	0	1	13476000			41464	9313	27659	27672	47177	47177					0.0865437527713766
PKTVQLLL	8	Unmodified	_PKTVQLLL_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3009033203125	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.79929	1	2030	2030		18.324	0	1	1220600			41465	4137	27660	27673	47178	47178					0.1262842283365444
PKTVQLLL	8	Unmodified	_PKTVQLLL_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3010559082031	2	456.299853	910.585153	-1.2643	-0.00057689	4.2328	0.0019314	2.9685	0.0013545	456.30161744594176	35.005	1.68	35.044	34.605	36.285	0.038643					125	54	3	0	0	0	0.86288	1	1813	1813		26.796	0	1	565550			41466	4137	27660	27673	47179	47179					0.1262842283365444
PKTVQLLL	8	Unmodified	_PKTVQLLL_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3013916015625	2	456.299853	910.585153	0.23964	0.00010935	1.5979	0.00072912	1.8375	0.00083847	456.3004567864084	43.097	2.576	43.154	41.691	44.267	0.056747					113	66	3	0	0	0	0.884	1	2950	2950		33.516	0	1	821670			41467	4137	27660	27673	47180	47180					0.1262842283365444
PKTVQLLL	8	Unmodified	_PKTVQLLL_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3009948730469	2	456.299853	910.585153	-0.032958	-1.5039E-05	2.9428	0.0013428	2.9098	0.0013278	456.3010618832383	34.27	2.0114	34.48	34.107	36.119	0.21003					105	50	4	0	0	0	0.91472	1	2558	2558		44.117	0	1	1566600			41468	4137	27660	27673	47181	47181					0.1262842283365444
PKTVQLLL	8	Unmodified	_PKTVQLLL_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.3006286621094	2	456.299853	910.585153	0.82269	0.00037539	2.1236	0.000969	2.9463	0.0013444	456.30067401982916	32.79	1.601	33.001	32.465	34.066	0.21168					118	37	4	0	0	0	0.87922	1	2303	2303		31.955	0	1	2892400			41469	4137	27660	27673	47182	47182					0.1262842283365444
PKVEGDLKGPE	11	Unmodified	_PKVEGDLKGPE_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.812744140625	2	584.814053	1167.61355	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.021	1	62.051	61.551	62.551	0.029575								0	0	0	0.56276	1	5792	5792		46.457	6.3986	1				41470	3371	27661	27674	47183	47183					0.03645075952294974
PKVHRKRGQA	10	Unmodified	_PKVHRKRGQA_					0	0	0			REV__nc|ENSG00000146530|Q8N2E2-3|VWDE	REV__nc|ENSG00000146530|Q8N2E2-3|VWDE	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	588.8641357421875	2	588.857255	1175.69996	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.322	1	16.381	15.881	16.881	0.059269								0	0	0	0.45132	1	134	134		27.882	1.1893	1		+		41471	20022	27662	27675	47184	47184					0.11913545088168576
PKVKAHGKK	9	Unmodified	_PKVKAHGKK_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.8209533691406	2	496.821818	991.629084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.531	1	15.451	14.951	15.951	-0.080017								0	0	0	0.37744	1	32	32		51.335	17.82	1			+	41472	8826;620	27663	27676	47185	47185					0.13293452050652377
PKVKAKKA	8	Unmodified	_PKVKAKKA_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30047607421875	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.85277	1	7363	7363		25.45	0	1	1921500			41473	2000	27664	27677	47186	47186					0.14627262273359065
PKVKAKKA	8	Unmodified	_PKVKAKKA_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3004150390625	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.86906	1	6679	6679		8.2313	0	1	1819800			41474	2000	27664	27677	47187	47187					0.14627262273359065
PKVKVFIF	8	Unmodified	_PKVKVFIF_					0	0	0		ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.313720703125	2	489.312764	976.610974	2.0542	0.0010051	0.57603	0.00028186	2.6302	0.001287	489.3129287195053	95.274	2.0769	95.216	94.723	96.8	-0.057533					125	48	4	0	0	0	0.81724	1	10188	10188		14.664	1.7049	1	1409600			41475	2876	27665	27678	47188	47188					0.12173317075951218
PKVLTLLEITI	11	Unmodified	_PKVLTLLEITI_					0	0	0		ENST00000548387.1_1_12:81528603-81537122:+|nuORF	ENST00000548387.1_1_12:81528603-81537122:+|nuORF	ENST00000548387.1_1_12:81528603-81537122:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2666931152344	3	413.935602	1238.78498	0.41079	0.00017004	-0.85313	-0.00035314	-0.44234	-0.0001831	414.26957330269374	64.997	0.47457	65.122	64.767	65.242	0.12511					25	16	2	0	0	0	0.17334	1	5736	5736		27.644	17.54	1	152610			41476	13619	27666	27679	47189	47189					0.1751343299074506
PKVLTLLEITI	11	Unmodified	_PKVLTLLEITI_					0	0	0		ENST00000548387.1_1_12:81528603-81537122:+|nuORF	ENST00000548387.1_1_12:81528603-81537122:+|nuORF	ENST00000548387.1_1_12:81528603-81537122:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	413.935602	1238.78498	-1.0904	-0.00045135	-0.44023	-0.00018223	-1.5306	-0.00063358	413.9357401773808	65.032	0.60579	65.069	64.651	65.257	0.037857	-0.026269	0.00043757	NaN	27.644	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143380			41477	13619	27666	27679							0.1751343299074506
PKVMKALS	8	Unmodified	_PKVMKALS_					0	0	0			REV__AluSz_dup41362|chr7:130512498-130512758:+|1.8722326896374464|0.1458178941185087|3.68|62.0|10|3|sense	REV__AluSz_dup41362|chr7:130512498-130512758:+|1.8722326896374464|0.1458178941185087|3.68|62.0|10|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2652282714844	2	437.264956	872.515359	0.03062	1.3389E-05	1.7544	0.00076715	1.7851	0.00078054	437.2656144717129	22.266	1.1262	22.354	22.073	23.199	0.088013					130	57	3	0	0	0	0.80706	1	701	701		19.36	1.0356	1	2198600	+		41478	15394	27667	27680	47190	47190					0.0740022089340755
PKVRGFGL	8	Unmodified	_PKVRGFGL_					0	0	0			REV__ENSG00000131697|ENST00000378156|NPHP4	REV__ENSG00000131697|ENST00000378156|NPHP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2696228027344	2	437.268887	872.523222	0.20543	8.9826E-05	0.89562	0.00039163	1.1011	0.00048145	437.2682222163662	21.687	0.46619	21.058	20.849	21.315	-0.62834					23	11	3	0	0	0	0.81548	1	821	821		20.482	1.1219	1	69769	+		41479	18959	27668	27681	47191	47191					0.0818611620518368
PKVRHGGT	8	Unmodified	_PKVRHGGT_					0	0	0			REV__ENST00000524517.5_1_10:77098119-77118447:+|nuORF	REV__ENST00000524517.5_1_10:77098119-77118447:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.24578857421875	2	426.245944	850.477334	-0.71681	-0.00030554	0.86718	0.00036963	0.15037	6.4093E-05	426.24624802256477	87.382	3.0594	87.845	86.168	89.227	0.46312					121	74	2	0	0	0	0.8347	1	10294	10294		23.042	1.3402	1	3022100	+		41480	28165	27669	27682	47192	47192					0.046114710229517186
PKVRSSRPALP	11	Unmodified	_PKVRSSRPALP_					0	0	0		nc|ENSG00000021461|Q9HB55-6|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.365966796875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.77762	1	12862	12862		16.007	2.5527	1	3346600			41481	14741	27670	27683	47193	47193					0.12459876308275852
PKVRYYDLQ	9	Unmodified	_PKVRYYDLQ_					0	0	0		ENSG00000173572|ENST00000342929|NLRP13	ENSG00000173572|ENST00000342929|NLRP13	ENSG00000173572|ENST00000342929|NLRP13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	591.3192138671875	2	591.319306	1180.62406	-0.64143	-0.00037929	1.1914	0.00070451	0.54999	0.00032522	591.3201240825498	66.908	0.89341	66.924	66.652	67.546	0.016205					64	40	2	0	0	0	0.67345	1	6296	6296		42.396	1.618	1	235670			41482	6869	27671	27684	47194	47194					0.040971033973846716
PKVSQIGT	8	Unmodified	_PKVSQIGT_					0	0	0			REV__ENSG00000149548|ENST00000344762|CCDC15	REV__ENSG00000149548|ENST00000344762|CCDC15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2447814941406	2	415.242535	828.470518	2.5965	0.0010782	2.9987	0.0012452	5.5952	0.0023234	415.2437470423347	107.1	0.79471	107.2	106.82	107.62	0.10395					75	27	5	0	0	0	0.87922	1	13039	13039		31.955	0	1	2535100	+		41483	20178	27672	27685	47195	47195					0.049421133517171256
PKVWKRSGAW	10	Unmodified	_PKVWKRSGAW_					0	0	0		ENST00000549913.6_1_12:113306162-113306792:+|nuORF	ENST00000549913.6_1_12:113306162-113306792:+|nuORF	ENST00000549913.6_1_12:113306162-113306792:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.56439208984375	3	405.564614	1213.67201	0.049875	2.0228E-05	-0.3046	-0.00012354	-0.25473	-0.00010331	405.5644031089545	61.094	0.39898	61.061	60.713	61.112	-0.032509					28	15	2	0	0	0	0.85939	1	5767	5767		16.007	1.3131	1	359570			41484	13646	27673	27686	47196	47196					0.07372222108097048
PKWCTTRCCTP	11	Unmodified	_PKWCTTRCCTP_					0	0	0			REV__ENSG00000187272|ENST00000254072|KRTAP9-8	REV__ENSG00000187272|ENST00000254072|KRTAP9-8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.25567626953125	3	432.527966	1294.56207	-1.574	-0.00068079	-2.6964	-0.0011663	-4.2704	-0.0018471	432.8623772072274	107.07	0.15011	107.2	107.13	107.28	0.13867					5	3	2	0	0	0	0.1747	1	11490	11490		41.08	16.848	1	40260	+		41485	22395	27674	27687	47197	47197					-0.07343030609285961
PKWRMNKLLAP	11	Unmodified	_PKWRMNKLLAP_					0	0	0			REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.93341064453125	3	451.932309	1352.7751	2.5866	0.001169	-1.7857	-0.00080703	0.80084	0.00036192	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.78391	1	11059	11059		14.694	0.60766	1	1152500	+		41486	20201	27675	27688	47198	47198					0.11281966504407137
PKYHCIQY	8	Carbamidomethyl (C)	_PKYHC(Carbamidomethyl (C))IQY_	PKYHC(1)IQY		PKYHC(60)IQY		0	1	0		ENST00000504169.1_2_4:184368579-184368630:+|nuORF	ENST00000504169.1_2_4:184368579-184368630:+|nuORF	ENST00000504169.1_2_4:184368579-184368630:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.7678833007812	2	554.765852	1107.51715	-0.22767	-0.0001263	3.5507	0.0019698	3.323	0.0018435	554.7672775876852	34.559	0.95993	34.565	34.015	34.975	0.0063934					45	22	3	0	0	0	0.84634	1	2114	2114		60.294	17.819	1	134960			41487	12900	27676	27689	47199	47199	168				-0.03230770088657664
PKYVGRVL	8	Unmodified	_PKYVGRVL_					0	0	0		ENSG00000125780|ENST00000381458|TGM3	ENSG00000125780|ENST00000381458|TGM3	ENSG00000125780|ENST00000381458|TGM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.7912292480469	2	466.28982	930.565087	-0.64111	-0.00029894	0.64441	0.00030048	0.0033003	1.5389E-06	466.28999408550436	73.948	1.2575	73.992	73.721	74.978	0.043648					98	48	3	0	0	0	0.93529	1	7114	7114		52.299	5.5327	1	991630			41488	3415	27677	27690	47200	47200					0.09702671893705883
PLAALLLALL	10	Unmodified	_PLAALLLALL_					0	0	0			REV__ENSG00000228300|ENST00000409293|FAM174C	REV__ENSG00000228300|ENST00000409293|FAM174C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3454284667969	2	504.346803	1006.67905	-0.55637	-0.0002806	-2.161	-0.0010899	-2.7173	-0.0013705	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.85976	1	5784	5784		35.201	15.841	1	1905800	+		41489	23749	27678	27691	47201	47201					0.17598141935934564
PLAAPIKVRCV	11	Unmodified	_PLAAPIKVRCV_					0	0	0			REV__ENSG00000145715|ENST00000274376|RASA1	REV__ENSG00000145715|ENST00000274376|RASA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	583.8584594726562	2	583.857544	1165.70053	-0.3359	-0.00019612	2.9491	0.0017219	2.6132	0.0015257	583.8590443013582	98.927	2.0052	98.927	98.457	100.46	0					114	48	4	0	0	0	0.68378	2	9981	9970;9981		34.173	3.6504	1	900440	+		41490	19959	27679	27692	47202;47203	47203					0.12431203692995041
PLAAPIKVRCV	11	Unmodified	_PLAAPIKVRCV_					0	0	0			REV__ENSG00000145715|ENST00000274376|RASA1	REV__ENSG00000145715|ENST00000274376|RASA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.8583984375	2	583.857544	1165.70053	-0.80586	-0.00047051	3.1308	0.001828	2.325	0.0013575	583.8591949944405	98.804	2.4153	98.854	98.351	100.77	0.049828					137	55	4	0	0	0	0.68378	1	10467	10467		34.173	1.3601	1	1986800	+		41491	19959	27679	27692	47204	47204					0.12431203692995041
PLAAPIKVRCV	11	Unmodified	_PLAAPIKVRCV_					0	0	0			REV__ENSG00000145715|ENST00000274376|RASA1	REV__ENSG00000145715|ENST00000274376|RASA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.85888671875	2	583.857544	1165.70053	2.8156	0.0016439	-0.51517	-0.00030079	2.3005	0.0013431	583.8570467437777	98.7	2.5935	98.645	98.156	100.75	-0.054817					154	59	5	0	0	0	0.72918	2	10632	10632;10679		26.693	4.733	1	1920100	+		41492	19959	27679	27692	47205;47206	47205					0.12431203692995041
PLAAPIKVRCV	11	Unmodified	_PLAAPIKVRCV_					0	0	0			REV__ENSG00000145715|ENST00000274376|RASA1	REV__ENSG00000145715|ENST00000274376|RASA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.8585205078125	2	583.857544	1165.70053	-0.018036	-1.053E-05	2.4205	0.0014132	2.4025	0.0014027	583.8586981991532	98.483	2.4194	98.532	98.099	100.52	0.048157					136	55	4	0	0	0	0.45916	4	10560	10511;10523;10535;10560		54.776	20.604	1	1823400	+		41493	19959	27679	27692	47207;47208;47209;47210	47210					0.12431203692995041
PLAAPIKVRCV	11	Unmodified	_PLAAPIKVRCV_					0	0	0			REV__ENSG00000145715|ENST00000274376|RASA1	REV__ENSG00000145715|ENST00000274376|RASA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	583.8585815429688	2	583.857544	1165.70053	0.74065	0.00043243	1.5357	0.00089662	2.2763	0.001329	583.8582354915881	98.447	2.0436	98.675	98.127	100.17	0.22788					107	47	4	0	0	0	0.68378	1	10206	10206		34.173	9.9698	1	1023000	+		41494	19959	27679	27692	47211	47211					0.12431203692995041
PLAAPIKVRCV	11	Unmodified	_PLAAPIKVRCV_					0	0	0			REV__ENSG00000145715|ENST00000274376|RASA1	REV__ENSG00000145715|ENST00000274376|RASA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	583.8583374023438	2	583.857544	1165.70053	-1.3418	-0.00078345	3.7357	0.0021811	2.3939	0.0013977	583.8594781261362	98.555	2.0612	98.751	98.2	100.26	0.19585					97	47	4	0	0	0	0.63176	1	10185	10185		40.778	15.204	1	828850	+		41495	19959	27679	27692	47212	47212					0.12431203692995041
PLAAPIKVRCV	11	Unmodified	_PLAAPIKVRCV_					0	0	0			REV__ENSG00000145715|ENST00000274376|RASA1	REV__ENSG00000145715|ENST00000274376|RASA1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	583.857544	1165.70053	0.62494	0.00036488	1.9451	0.0011356	2.57	0.0015005	583.85849732748	98.273	1.1341	98.659	98.22	99.355	0.38548	-0.054428	-6.3578E-05	NaN	54.776	79	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1371300	+		41496	19959	27679	27692							0.12431203692995041
PLAAPIKVRCV	11	Unmodified	_PLAAPIKVRCV_					0	0	0			REV__ENSG00000145715|ENST00000274376|RASA1	REV__ENSG00000145715|ENST00000274376|RASA1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	583.857544	1165.70053	1.1369	0.00066376	1.3733	0.00080184	2.5102	0.0014656	583.8581680711554	98.367	1.0962	98.744	98.327	99.423	0.37679	0.030861	-0.00073119	NaN	54.776	78	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1568400	+		41497	19959	27679	27692							0.12431203692995041
PLAAPPVF	8	Unmodified	_PLAAPPVF_					0	0	0			REV__ENST00000466569.1_1_13:96285564-96294263:-|nuORF	REV__ENST00000466569.1_1_13:96285564-96294263:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2485046386719	2	406.239264	810.463976	-1.1635	-0.00047265	1.9896	0.00080826	0.82613	0.0003356	406.240099292406	89.279	0.12923	89.279	89.215	89.344	0					4	2	2	0	0	0	0.4196	1	8640	8640		33.493	8.989	1	24263	+		41498	27135	27680	27693	47213	47213					0.05116220190996046
PLAARPGLLGW	11	Unmodified	_PLAARPGLLGW_					0	0	0		ENST00000334801.7_1_11:118781071-118781260:-|nuORF	ENST00000334801.7_1_11:118781071-118781260:-|nuORF	ENST00000334801.7_1_11:118781071-118781260:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8429565429688	2	575.840208	1149.66586	0.78302	0.0004509	3.9888	0.0022969	4.7719	0.0027478	575.8423757005949	90.383	2.7025	90.537	88.725	91.427	0.15388					214	64	4	0	0	0	0.68378	1	9056	9056		34.173	6.2903	1	2399100			41499	10151	27681	27694	47214	47214					0.0970170387656708
PLADQIPL	8	Unmodified	_PLADQIPL_					0	0	0		ENSG00000170396|ENST00000302277|ZNF804A	ENSG00000170396|ENST00000302277|ZNF804A	ENSG00000170396|ENST00000302277|ZNF804A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7529296875	2	433.752736	865.490919	-0.89842	-0.00038969	1.1465	0.00049731	0.2481	0.00010762	433.7530751140989	61.556	3.4273	61.944	61.394	64.821	0.38845					196	83	3	0	0	0	0.37614	2	6658	6658;6682		88.643	2.0566	1	960390			41500	6584	27682	27695	47215;47216	47215					0.052792840115330364
PLADQIPL	8	Unmodified	_PLADQIPL_					0	0	0		ENSG00000170396|ENST00000302277|ZNF804A	ENSG00000170396|ENST00000302277|ZNF804A	ENSG00000170396|ENST00000302277|ZNF804A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.7525939941406	2	433.752736	865.490919	0.16558	7.1822E-05	0.12045	5.2244E-05	0.28603	0.00012407	433.75263120517457	61.559	3.4925	62.113	61.36	64.852	0.55386					226	86	4	0	0	0	0.84634	1	6826	6826		60.294	7.9948	1	1110200			41501	6584	27682	27695	47217	47217					0.052792840115330364
PLAEKIIRTI	10	Unmodified	_PLAEKIIRTI_					0	0	0			REV__ENST00000479871.1_1_9:116172333-116172573:-|nuORF	REV__ENST00000479871.1_1_9:116172333-116172573:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.366455078125	2	577.368798	1152.72304	-0.96039	-0.0005545	-2.9913	-0.0017271	-3.9517	-0.0022816	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.82886	1	10992	10992		37.812	3.639	1	9850700	+		41502	20105	27683	27696	47218	47218					0.15279126362293027
PLAEQALQV	9	Unmodified	_PLAEQALQV_					0	0	0			REV__nc|ENSG00000117425|Q9Y6C5-2|PTCH2	REV__nc|ENSG00000117425|Q9Y6C5-2|PTCH2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.3052673339844	2	484.7742	967.533846	0.29228	0.00014169	-0.34772	-0.00016857	-0.055447	-2.6879E-05	484.77384906257805	53.427	0.61974	53.841	53.54	54.16	0.4139					35	14	3	0	0	0	0.20789	1	5423	5423		34.173	0	1	796490	+		41503	18261	27684	27697	47219	47219					0.04878054068956317
PLAERLIRIM	10	Unmodified	_PLAERLIRIM_					0	0	0		ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A;ENST00000487189.5_1_16:11118684-11138007:+|nuORF;ENST00000463459.1_1_16:11118735-11142283:+|nuORF	ENSG00000038532|ENST00000409790|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	606.3687133789062	2	606.368275	1210.722	-0.46368	-0.00028116	2.445	0.0014826	1.9813	0.0012014	606.3696540978959	94.435	3.8289	94.503	93.215	97.044	0.068336					198	90	3	0	0	0	0.8486	2	9835	9835;9900		22.58	5.8623	1	750990			41504	918	27685	27698	47220;47221	47220					0.12506588721726075
PLAERLIRIM	10	Unmodified	_PLAERLIRIM_					0	0	0		ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A;ENST00000487189.5_1_16:11118684-11138007:+|nuORF;ENST00000463459.1_1_16:11118735-11142283:+|nuORF	ENSG00000038532|ENST00000409790|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.3699951171875	2	606.368275	1210.722	-0.02762	-1.6748E-05	2.1046	0.0012762	2.077	0.0012594	606.3694476526515	94.093	3.5324	94.139	93.078	96.61	0.045456					200	83	3	0	0	0	0.8505	3	9877	9865;9877;9956		24.519	0.99649	1	863170			41505	918	27685	27698	47222;47223;47224	47223					0.12506588721726075
PLAERLIRIM	10	Unmodified	_PLAERLIRIM_					0	0	0		ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A;ENST00000487189.5_1_16:11118684-11138007:+|nuORF;ENST00000463459.1_1_16:11118735-11142283:+|nuORF	ENSG00000038532|ENST00000409790|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	606.3696899414062	2	606.368275	1210.722	0.84903	0.00051483	1.188	0.00072039	2.0371	0.0012352	606.3688643769136	94.076	3.4223	94.237	93.324	96.746	0.16118					202	81	3	0	0	0	0.8545	2	9581	9581;9604		36.447	7.2972	1	934800			41506	918	27685	27698	47225;47226	47225					0.12506588721726075
PLAERLIRIM	10	Unmodified	_PLAERLIRIM_					0	0	0		ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A;ENST00000487189.5_1_16:11118684-11138007:+|nuORF;ENST00000463459.1_1_16:11118735-11142283:+|nuORF	ENSG00000038532|ENST00000409790|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.3710327148438	2	606.368275	1210.722	-1.2685	-0.00076921	3.3418	0.0020264	2.0733	0.0012572	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.73395	1	9563	9563		42.864	19.342	1	823240			41507	918	27685	27698	47227	47227					0.12506588721726075
PLAGLAPKRRA	11	Unmodified	_PLAGLAPKRRA_					0	0	0		nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	nc|ENSG00000076108|Q9UIF9-2|BAZ2A	nc|ENSG00000076108|Q9UIF9-2|BAZ2A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.3646850585938	2	575.364382	1148.71421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.702	1	18.678	18.178	19.178	-0.024035								0	0	0	0.56276	1	356	356		26.693	5.746	1				41508	1351	27686	27699	47228	47228					0.14580197516465887
PLAGLKNN	8	Unmodified	_PLAGLKNN_					0	0	0			REV__ENSG00000077454|ENST00000310300|LRCH4	REV__ENSG00000077454|ENST00000310300|LRCH4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.743896484375	2	413.742702	825.470852	-0.14626	-6.0512E-05	0.2076	8.5892E-05	0.061341	2.538E-05	413.74285605414093	31.009	0.66088	31.089	30.767	31.428	0.079834					26	14	2	0	0	0	0.88915	1	2081	2081		35.201	1.6851	1	147880	+		41509	16748	27687	27700	47229	47229					0.05113533071562415
PLAGRRKRTV	10	Unmodified	_PLAGRRKRTV_					0	0	0			REV__ENST00000526094.5_1_17:42295802-42295859:-|nuORF	REV__ENST00000526094.5_1_17:42295802-42295859:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	577.3660888671875	2	577.367456	1152.72036	0.74115	0.00042792	-2.508	-0.0014481	-1.7669	-0.0010201	577.3658570064985	102.18	2.9839	102.23	101.81	104.79	0.043198					214	72	5	0	0	0	0.8505	1	11037	11037		19.104	0.77911	1	10154000	+		41510	28193	27688	27701	47230	47230					0.15010715747962422
PLAGRRKRTV	10	Unmodified	_PLAGRRKRTV_					0	0	0			REV__ENST00000526094.5_1_17:42295802-42295859:-|nuORF	REV__ENST00000526094.5_1_17:42295802-42295859:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3662109375	2	577.367456	1152.72036	0.64818	0.00037424	-2.4151	-0.0013944	-1.7669	-0.0010202	577.3659582171192	102.04	3.0704	102.23	101.84	104.91	0.19484					206	76	5	0	0	0	0.8651	1	10705	10705		25.574	2.5316	1	17266000	+		41511	28193	27688	27701	47231	47231					0.15010715747962422
PLAGRRKRTV	10	Unmodified	_PLAGRRKRTV_					0	0	0			REV__ENST00000526094.5_1_17:42295802-42295859:-|nuORF	REV__ENST00000526094.5_1_17:42295802-42295859:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	577.3662719726562	2	577.367456	1152.72036	0.87834	0.00050713	-2.6389	-0.0015236	-1.7606	-0.0010165	577.3658132315567	102.16	3.1638	102.3	101.85	105.01	0.13522					236	78	5	0	0	0	0.8651	1	10763	10763		25.574	8.2091	1	15036000	+		41512	28193	27688	27701	47232	47232					0.15010715747962422
PLAIQQIKAVS	11	Unmodified	_PLAIQQIKAVS_					0	0	0		ENSG00000178295|ENST00000381254|GEN1	ENSG00000178295|ENST00000381254|GEN1	ENSG00000178295|ENST00000381254|GEN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.3567504882812	2	584.358431	1166.70231	-0.79353	-0.00046371	-3.4252	-0.0020015	-4.2187	-0.0024653	584.356586051485	92.738	2.8775	92.808	91.472	94.349	0.06987					192	67	3	0	0	0	0.7434	1	9601	9601		23.523	7.0495	1	594900			41513	7197	27689	27702	47233	47233					0.12562535982578993
PLAISRKP	8	Unmodified	_PLAISRKP_					0	0	0		ENSG00000178177|ENST00000635767|LCORL	ENSG00000178177|ENST00000635767|LCORL	ENSG00000178177|ENST00000635767|LCORL	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.28076171875	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.517	1	40.523	40.023	41.023	0.0065727								0	0	0	0.30784	1	2920	2920		14.664	0.88877	1				41514	7189	27690	27703	47234	47234					0.10438385376653514
PLAKDKTLIVN	11	Unmodified	_PLAKDKTLIVN_					0	0	0			REV__nc|ENSG00000047849|P27816-6|MAP4	REV__nc|ENSG00000047849|P27816-6|MAP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	606.369140625	2	606.371538	1210.72852	-0.46367	-0.00028116	-2.9355	-0.00178	-3.3992	-0.0020612	606.3696540978959	94.435	3.8289	94.503	93.215	97.044	0.068336					198	90	3	0	0	0	0.7434	1	9888	9888		23.523	0.94304	1	750990	+		41515	29685	27691	27704	47235	47235					0.13158805154080255
PLAKKLAVEKG	11	Unmodified	_PLAKKLAVEKG_					0	0	0		ENSG00000150768|ENST00000280346|DLAT;ENST00000533297.1_1_11:111896132-111933256:+|nuORF	ENSG00000150768|ENST00000280346|DLAT	ENSG00000150768|ENST00000280346|DLAT	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3665161132812	2	577.368798	1152.72304	-0.31736	-0.00018324	-3.4769	-0.0020075	-3.7943	-0.0021907	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.72106	1	10462	10462		28.081	0	1	6617600			41516	5084	27692	27705	47236	47236					0.1527912636227029
PLAKKLAVEKG	11	Unmodified	_PLAKKLAVEKG_					0	0	0		ENSG00000150768|ENST00000280346|DLAT;ENST00000533297.1_1_11:111896132-111933256:+|nuORF	ENSG00000150768|ENST00000280346|DLAT	ENSG00000150768|ENST00000280346|DLAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.3663940429688	2	577.368798	1152.72304	-0.96039	-0.0005545	-2.9913	-0.0017271	-3.9517	-0.0022816	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.7144	1	11040	11040		29.17	3.596	1	9850700			41517	5084	27692	27705	47237	47237					0.1527912636227029
PLAKKLAVEKG	11	Unmodified	_PLAKKLAVEKG_					0	0	0		ENSG00000150768|ENST00000280346|DLAT;ENST00000533297.1_1_11:111896132-111933256:+|nuORF	ENSG00000150768|ENST00000280346|DLAT	ENSG00000150768|ENST00000280346|DLAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3665771484375	2	577.368798	1152.72304	-1.363	-0.00078696	-2.7149	-0.0015675	-4.0779	-0.0023544	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.67778	2	10765	10657;10765		35.152	4.8343	1	14386000			41518	5084	27692	27705	47238;47239	47239					0.1527912636227029
PLALILLLL	9	Unmodified	_PLALILLLL_					0	0	0		ENST00000479510.2_1_6:33387852-33406697:+|nuORF	ENST00000479510.2_1_6:33387852-33406697:+|nuORF	ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.8507385253906	2	489.851722	977.68889	-1.1937	-0.00058473	-1.5282	-0.00074858	-2.7219	-0.0013333	489.85086381019767	75.118	0.87303	75.205	74.865	75.739	0.087631					32	21	2	0	0	0	0.7932	1	6954	6954		21.702	0	1	195300			41519	12408	27693	27706	47240	47240					0.19915329941329674
PLALKTLTYTG	11	Unmodified	_PLALKTLTYTG_					0	0	0			REV__ENSG00000087076|ENST00000263278|HSD17B14	REV__ENSG00000087076|ENST00000263278|HSD17B14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3421020507812	2	589.344989	1176.67542	-0.6745	-0.00039751	-2.9294	-0.0017264	-3.6039	-0.002124	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.70737	1	9831	9831		30.318	2.2362	1	16185000	+		41520	16920	27694	27707	47241	47241					0.09415427371413898
PLALKTLTYTG	11	Unmodified	_PLALKTLTYTG_					0	0	0			REV__ENSG00000087076|ENST00000263278|HSD17B14	REV__ENSG00000087076|ENST00000263278|HSD17B14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3426513671875	2	589.344989	1176.67542	-0.65315	-0.00038493	-3.1619	-0.0018634	-3.815	-0.0022484	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.70737	1	9600	9600		30.318	2.2362	1	5584100	+		41521	16920	27694	27707	47242	47242					0.09415427371413898
PLALKTLTYTG	11	Unmodified	_PLALKTLTYTG_					0	0	0			REV__ENSG00000087076|ENST00000263278|HSD17B14	REV__ENSG00000087076|ENST00000263278|HSD17B14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427734375	2	589.344989	1176.67542	0.83312	0.00049099	-4.3931	-0.002589	-3.5599	-0.002098	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.67778	2	9679	9667;9679		35.152	2.3396	1	20363000	+		41522	16920	27694	27707	47243;47244	47244					0.09415427371413898
PLALKTLTYTG	11	Unmodified	_PLALKTLTYTG_					0	0	0			REV__ENSG00000087076|ENST00000263278|HSD17B14	REV__ENSG00000087076|ENST00000263278|HSD17B14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3427734375	2	589.344989	1176.67542	0.15553	9.1664E-05	-3.5398	-0.0020862	-3.3842	-0.0019945	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.67778	1	11175	11175		35.152	3.5178	1	10540000	+		41523	16920	27694	27707	47245	47245					0.09415427371413898
PLALLYAL	8	Unmodified	_PLALLYAL_					0	0	0			REV__ENSG00000151779|ENST00000281513|NBAS;REV__nc|ENSG00000151779|A2RRP1-2|NBAS	REV__nc|ENSG00000151779|A2RRP1-2|NBAS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2732849121094	2	437.275847	872.537141	-2.0706	-0.00090544	-0.89967	-0.0003934	-2.9703	-0.0012988	437.27525866962554	27.098	0.48258	27.098	26.739	27.222	0					26	21	2	0	0	0	0.84567	1	1074	1074		24.504	0	1	39708	+		41524	20268;29931	27695	27708	47246	47246					0.09577348913592232
PLALPLVEMA	10	Unmodified	_PLALPLVEMA_					0	0	0			REV__nc|ENSG00000119778|Q9ULI0-2|ATAD2B	REV__nc|ENSG00000119778|Q9ULI0-2|ATAD2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3057861328125	2	527.304278	1052.594	-0.62415	-0.00032912	1.4421	0.00076041	0.81792	0.00043129	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.86452	1	10171	10171		30.504	3.8107	1	949980	+		41525	18378	27696	27709	47247	47247					0.06981028407835765
PLALPVGKAR	10	Unmodified	_PLALPVGKAR_					0	0	0		ENSG00000174442|ENST00000307897|ZWILCH;ENST00000567926.5_1_15:66806337-66811430:+|nuORF	ENSG00000174442|ENST00000307897|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.3276062011719	2	511.329476	1020.6444	-1.5781	-0.00080692	-3.0137	-0.001541	-4.5918	-0.0023479	511.3278411382384	97.118	1.95	97.32	96.964	98.914	0.20206					112	44	4	0	0	0	0.85694	1	10026	10026		21.96	0	1	1123400			41526	6933	27697	27710	47248	47248					0.13490318847846083
PLALPVTT	8	Unmodified	_PLALPVTT_					0	0	0			REV__nc|ENSG00000188807|Q5SNT2-2|TMEM201	REV__nc|ENSG00000188807|Q5SNT2-2|TMEM201	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24786376953125	2	406.249829	810.485105	0.73391	0.00029815	-3.7175	-0.0015102	-2.9836	-0.0012121	406.248260413121	111.47	0.7254	111.54	111.15	111.88	0.069542					33	24	2	0	0	0	0.81724	1	11994	11994		14.664	0	1	102910	+		41527	23032	27698	27711	47249	47249					0.07228185499832307
PLALRQPVK	9	Unmodified	_PLALRQPVK_					0	0	0		ENSG00000109171|ENST00000264313|SLAIN2	ENSG00000109171|ENST00000264313|SLAIN2	ENSG00000109171|ENST00000264313|SLAIN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.3269348144531	2	511.329476	1020.6444	-0.73647	-0.00037658	-3.6891	-0.0018863	-4.4256	-0.0022629	511.3274858429374	97.597	1.7759	97.597	97.074	98.849	0					91	42	3	0	0	0	0.77546	1	9817	9817		31.955	0	1	585290			41528	2452	27699	27712	47250	47250					0.13490318847846083
PLALRQPVK	9	Unmodified	_PLALRQPVK_					0	0	0		ENSG00000109171|ENST00000264313|SLAIN2	ENSG00000109171|ENST00000264313|SLAIN2	ENSG00000109171|ENST00000264313|SLAIN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.3272399902344	2	511.329476	1020.6444	-1.5781	-0.00080692	-3.0137	-0.001541	-4.5918	-0.0023479	511.3278411382384	97.118	1.95	97.32	96.964	98.914	0.20206					112	44	4	0	0	0	0.7932	1	10014	10014		21.96	0	1	1123400			41529	2452	27699	27712	47251	47251					0.13490318847846083
PLALVPLLLT	10	Unmodified	_PLALVPLLLT_					0	0	0			REV__ENST00000409978.5_2_2:39184070-39186986:+|nuORF	REV__ENST00000409978.5_2_2:39184070-39186986:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.2543334960938	2	525.352086	1048.68962	-1.1532	-0.00060581	3.287	0.0017268	2.1338	0.001121	525.3537779299054	38.081	1.1638	38.093	37.509	38.673	0.011173					39	26	2	0	0	0	0.37624	1	2582	2582		6.3127	3.1534	1	46565	+		41530	26360	27700	27713	47252	47252					0.1672212459036473
PLALWPLVL	9	Unmodified	_PLALWPLVL_					0	0	0			REV__ENST00000532415.5_1_16:18477017-18479494:-|nuORF	REV__ENST00000532415.5_1_16:18477017-18479494:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.32708740234375	2	511.325871	1020.63719	0.52338	0.00026762	1.9285	0.00098609	2.4519	0.0012537	511.3267559398498	97.201	2.4372	97.249	96.783	99.22	0.048157					148	56	4	0	0	0	0.7932	1	10344	10344		14.664	5.1935	1	1880900	+		41531	28324	27701	27714	47253	47253					0.12769586247418374
PLAPEKQNW	9	Unmodified	_PLAPEKQNW_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|42|2|sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|42|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.7843627929688	2	541.785099	1081.55564	-0.1772	-9.6005E-05	0.51969	0.00028156	0.34249	0.00018556	541.7852873202811	56.84	2.4261	56.873	56.56	58.986	0.033184					182	81	4	0	0	0	0.38563	1	5264	5264		58.782	0.97068	1	6132200	+		41532	29574	27702	27715	47254	47254					0.01812858817538654
PLAPGKRTIL	10	Unmodified	_PLAPGKRTIL_					0	0	0		ENST00000498652.1_1_7:27186997-27192018:-|nuORF;ENST00000518451.1_1_7:27166683-27192069:-|nuORF;ENST00000467897.2_1_7:27168846-27192162:-|nuORF	ENST00000498652.1_1_7:27186997-27192018:-|nuORF	ENST00000498652.1_1_7:27186997-27192018:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3401489257812	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.8651	1	10515	10515		25.574	0	1	2530900			41533	12164	27703	27716	47255	47255					0.1408658801931324
PLAPKGRK	8	Unmodified	_PLAPKGRK_					0	0	0		ENST00000567393.5_1_15:75645991-75647372:+|nuORF;ENSG00000140398|ENST00000355059|NEIL1	ENST00000567393.5_1_15:75645991-75647372:+|nuORF	ENST00000567393.5_1_15:75645991-75647372:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7806091308594	2	433.782162	865.549771	-1.6206	-0.00070297	1.067	0.00046286	-0.55351	-0.0002401	433.7810672648349	63.308	0.2094	63.422	63.279	63.488	0.11389					13	9	2	0	0	0	0.4196	1	5525	5525		19.36	7.849	1	62308			41534	4430	27704	27717	47256	47256					0.11161805096514854
PLAPKGRK	8	Unmodified	_PLAPKGRK_					0	0	0		ENST00000567393.5_1_15:75645991-75647372:+|nuORF;ENSG00000140398|ENST00000355059|NEIL1	ENST00000567393.5_1_15:75645991-75647372:+|nuORF	ENST00000567393.5_1_15:75645991-75647372:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77984619140625	2	433.782162	865.549771	0.28843	0.00012512	-3.8544	-0.001672	-3.566	-0.0015469	433.78110763255734	50.946	4.0891	50.995	50.343	54.432	0.049896					422	122	5	0	0	0	0.85787	1	4302	4302		9.4706	0.64823	1	4871400			41535	4430	27704	27717	47257	47257					0.11161805096514854
PLAPKGRK	8	Unmodified	_PLAPKGRK_					0	0	0		ENST00000567393.5_1_15:75645991-75647372:+|nuORF;ENSG00000140398|ENST00000355059|NEIL1	ENST00000567393.5_1_15:75645991-75647372:+|nuORF	ENST00000567393.5_1_15:75645991-75647372:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	433.782162	865.549771	-0.17018	-7.3821E-05	-1.2073	-0.0005237	-1.3775	-0.00059752	433.78031034002043	63.716	0.58289	63.716	63.441	64.024	-0.00078964	0.015426	-0.00059119	NaN	19.36	36	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106350			41536	4430	27704	27717							0.11161805096514854
PLAPKGRK	8	Unmodified	_PLAPKGRK_					0	0	0		ENST00000567393.5_1_15:75645991-75647372:+|nuORF;ENSG00000140398|ENST00000355059|NEIL1	ENST00000567393.5_1_15:75645991-75647372:+|nuORF	ENST00000567393.5_1_15:75645991-75647372:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	433.782162	865.549771	0.40194	0.00017435	-4.5344	-0.0019669	-4.1325	-0.0017926	433.78052952350436	63.84	0.2301	63.963	63.8	64.03	0.12252	0.26245	-0.0034777	NaN	19.36	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52992			41537	4430	27704	27717							0.11161805096514854
PLAPVCQPCPG	11	Unmodified	_PLAPVCQPCPG_					0	0	0			REV__ENST00000442128.2_1_2:96195103-96195190:+|nuORF	REV__ENST00000442128.2_1_2:96195103-96195190:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	541.2621459960938	2	541.262087	1080.50962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.011	1	80.152	79.652	80.652	0.14117								0	0	0	0.56276	1	7612	7612		35.618	2.8059	1		+		41538	26767	27705	27718	47258	47258					-0.027412456805905094
PLAPVRILAMN	11	Unmodified	_PLAPVRILAMN_					0	0	0		ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8563232421875	2	597.855001	1193.69545	-0.43134	-0.00025788	2.6383	0.0015773	2.207	0.0013195	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.6921	1	10025	10025		32.812	0	1	6857100			41539	3059	27706	27719	47259	47259					0.10634899830415634
PLAQRSMLILP	11	Unmodified	_PLAQRSMLILP_					0	0	0			REV__nc|ENSG00000168065|Q9NSA0-2|SLC22A11	REV__nc|ENSG00000168065|Q9NSA0-2|SLC22A11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8703002929688	2	619.868108	1237.72166	1.7162	0.0010638	0.6746	0.00041816	2.3908	0.001482	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.65746	1	11579	11579		37.812	2.6595	1	4719500	+		41540	21457	27707	27720	47260	47260					0.11231169001894159
PLARAGAR	8	Unmodified	_PLARAGAR_					0	0	0			REV__ENST00000361505.9_1_14:20944805-20945120:+|nuORF	REV__ENST00000361505.9_1_14:20944805-20945120:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24859619140625	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.21	1	117.19	116.69	117.69	-0.02433								0	0	0	0.29498	1	12980	12980		26.796	1.3459	1		+		41541	25501	27708	27721	47261	47261					0.06959774885558545
PLARLLLAWSA	11	Unmodified	_PLARLLLAWSA_					0	0	0		ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.8727416992188	2	605.868966	1209.72338	2.969	0.0017988	2.3223	0.001407	5.2914	0.0032059	605.8701685265158	100.36	1.5776	100.31	99.825	101.4	-0.052109					123	36	5	0	0	0	0.70737	1	10877	10877		30.318	1.1682	1	1633200			41542	4563	27709	27722	47262	47262					0.12690546082149012
PLARLLLAWSA	11	Unmodified	_PLARLLLAWSA_					0	0	0		ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.8721313476562	2	605.868966	1209.72338	1.0692	0.00064779	4.1265	0.0025001	5.1957	0.0031479	605.8712819289403	100.09	1.5113	100.3	99.817	101.33	0.21512					93	35	4	0	0	0	0.70737	1	10433	10433		30.318	2.4355	1	798340			41543	4563	27709	27722	47263	47263					0.12690546082149012
PLARLLLAWSA	11	Unmodified	_PLARLLLAWSA_					0	0	0		ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.873291015625	2	605.868966	1209.72338	2.1175	0.0012829	3.5745	0.0021657	5.692	0.0034486	605.8709120957792	99.886	1.4328	100.22	99.77	101.2	0.33295					98	35	4	0	0	0	0.66929	1	12109	12109		36.447	7.2972	1	1222300			41544	4563	27709	27722	47264	47264					0.12690546082149012
PLARLLLAWSA	11	Unmodified	_PLARLLLAWSA_					0	0	0		ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.8727416992188	2	605.868966	1209.72338	2.1215	0.0012854	3.5656	0.0021603	5.6871	0.0034456	605.870912508801	99.925	1.6378	100.29	99.878	101.52	0.36292					110	40	4	0	0	0	0.7144	1	12159	12159		29.17	8.2231	1	1159400			41545	4563	27709	27722	47265	47265					0.12690546082149012
PLARLRRPAS	10	Unmodified	_PLARLRRPAS_					0	0	0		ENST00000530167.1_1_11:118965174-118965585:-|nuORF	ENST00000530167.1_1_11:118965174-118965585:-|nuORF	ENST00000530167.1_1_11:118965174-118965585:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8538818359375	2	568.854181	1135.69381	0.52259	0.00029728	-2.4856	-0.0014139	-1.963	-0.0011166	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.86718	1	10987	10987		27.882	2.4321	1	84800000			41546	13341	27710	27723	47266	47266					0.1313902685665198
PLASLTPKSY	10	Unmodified	_PLASLTPKSY_					0	0	0			REV__ENST00000444199.1_1_19:55208384-55209490:+|nuORF;REV__nc|ENSG00000186818|Q8NHJ6-2|LILRB4	REV__nc|ENSG00000186818|Q8NHJ6-2|LILRB4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8034057617188	2	538.802957	1075.59136	0.1756	9.4612E-05	-0.19279	-0.00010387	-0.017192	-9.2631E-06	538.8028404328363	54.34	0.54427	54.747	54.446	54.99	0.40663					23	12	2	0	0	0	0.80179	1	5528	5528		39.253	0	1	478170	+		41547	26785;22882	27711	27724	47267	47267					0.05658896274530889
PLASLTPKSY	10	Unmodified	_PLASLTPKSY_					0	0	0			REV__ENST00000444199.1_1_19:55208384-55209490:+|nuORF;REV__nc|ENSG00000186818|Q8NHJ6-2|LILRB4	REV__nc|ENSG00000186818|Q8NHJ6-2|LILRB4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	538.802957	1075.59136	0.1756	9.4612E-05	-0.19279	-0.00010387	-0.017192	-9.2631E-06	538.8028404328363	54.34	0.54427	54.747	54.446	54.99	0.40663	0.020139	-0.00030049	NaN	39.253	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	478170	+		41548	26785;22882	27711	27724							0.05658896274530889
PLASLTPKSY	10	Unmodified	_PLASLTPKSY_					0	0	0			REV__ENST00000444199.1_1_19:55208384-55209490:+|nuORF;REV__nc|ENSG00000186818|Q8NHJ6-2|LILRB4	REV__nc|ENSG00000186818|Q8NHJ6-2|LILRB4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	538.802957	1075.59136	-0.84108	-0.00045318	0.16197	8.7271E-05	-0.67911	-0.00036591	538.8029242667925	54.122	0.58408	54.707	54.459	55.043	0.58474	-0.020139	8.1805E-05	NaN	39.253	30	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	456220	+		41549	26785;22882	27711	27724							0.05658896274530889
PLASRRLTRK	10	Unmodified	_PLASRRLTRK_					0	0	0		ENST00000510363.1_1_5:177580490-177580818:-|nuORF;ENSG00000145912|ENST00000274606|NHP2	ENST00000510363.1_1_5:177580490-177580818:-|nuORF	ENST00000510363.1_1_5:177580490-177580818:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.3798217773438	2	599.380563	1196.74657	-0.54345	-0.00032574	-0.29189	-0.00017495	-0.83534	-0.00050069	599.3802252506414	103.57	3.0198	103.57	103.18	106.2	-0.0035782					175	72	5	0	0	0	0.86348	1	11111	11111		31.53	2.3803	1	11998000			41550	4805	27712	27725	47268	47268					0.15606984919440947
PLATLLLQ	8	Unmodified	_PLATLLLQ_					0	0	0		ENSG00000212916|ENST00000418460|MAP10	ENSG00000212916|ENST00000418460|MAP10	ENSG00000212916|ENST00000418460|MAP10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.780517578125	2	434.778754	867.542954	0.12026	5.2288E-05	3.2796	0.0014259	3.3998	0.0014782	434.78004408406343	33.259	0.88562	33.227	32.891	33.776	-0.032677					85	40	3	0	0	0	0.87922	1	1635	1635		31.955	0	1	316820			41551	8573	27713	27726	47269	47269					0.10388447425293634
PLATPPLSAM	10	Unmodified	_PLATPPLSAM_					0	0	0		nc|ENSG00000183248|Q9H6K5-2|PRR36;ENSG00000183248|ENST00000618550|PRR36	nc|ENSG00000183248|Q9H6K5-2|PRR36	nc|ENSG00000183248|Q9H6K5-2|PRR36	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.2723693847656	2	499.272978	996.531403	-0.049997	-2.4962E-05	3.8404	0.0019174	3.7904	0.0018924	499.27490957056847	24.292	0.62216	23.91	23.663	24.285	-0.38178					25	13	3	0	0	0	0.86589	1	1160	1160		29.15	2.4566	1	89233			41552	7512	27714	27727	47270	47270					0.03299882339638316
PLATPPLSAM	10	Unmodified	_PLATPPLSAM_					0	0	0		nc|ENSG00000183248|Q9H6K5-2|PRR36;ENSG00000183248|ENST00000618550|PRR36	nc|ENSG00000183248|Q9H6K5-2|PRR36	nc|ENSG00000183248|Q9H6K5-2|PRR36	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	499.272978	996.531403	1.6153	0.00080646	2.5019	0.0012491	4.1172	0.0020556	499.27407633471705	24.193	0.64717	23.679	23.365	24.012	-0.51365	-0.11552	-0.00052283	NaN	29.15	24	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100120			41553	7512	27714	27727							0.03299882339638316
PLATSPAPL	9	Unmodified	_PLATSPAPL_					0	0	0			REV__ENST00000454665.6_1_6:27222493-27222541:+|nuORF	REV__ENST00000454665.6_1_6:27222493-27222541:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7533264160156	2	433.752736	865.490919	-0.89842	-0.00038969	1.1465	0.00049731	0.2481	0.00010762	433.7530751140989	61.556	3.4273	61.944	61.394	64.821	0.38845					196	83	3	0	0	0	0.67235	1	6695	6695		42.474	8.9589	1	960390	+		41554	26926	27715	27728	47271	47271					0.05279284011510299
PLATSPAPL	9	Unmodified	_PLATSPAPL_					0	0	0			REV__ENST00000454665.6_1_6:27222493-27222541:+|nuORF	REV__ENST00000454665.6_1_6:27222493-27222541:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.7523498535156	2	433.752736	865.490919	0.16558	7.1822E-05	0.12045	5.2244E-05	0.28603	0.00012407	433.75263120517457	61.559	3.4925	62.113	61.36	64.852	0.55386					226	86	4	0	0	0	0.67235	1	6808	6808		42.474	5.3154	1	1110200	+		41555	26926	27715	27728	47272	47272					0.05279284011510299
PLAVALGAL	9	Unmodified	_PLAVALGAL_					0	0	0		ENSG00000132821|ENST00000373461|VSTM2L;nc|ENSG00000132821|Q96N03-3|VSTM2L;nc|ENSG00000132821|Q96N03-2|VSTM2L	ENSG00000132821|ENST00000373461|VSTM2L	ENSG00000132821|ENST00000373461|VSTM2L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.2195739746094	2	412.765646	823.516739	1.2245	0.00050543	3.0441	0.0012565	4.2685	0.0017619	412.7667124107143	34.63	1.4963	35.012	34.442	35.938	0.3812					44	37	2	0	0	0	0.20789	1	2626	2626		29.842	22.151	1	244060			41556	3830	27716	27729	47273	47273					0.09792178253815109
PLAVILVMY	9	Unmodified	_PLAVILVMY_					0	0	0		ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8035888671875	2	509.803914	1017.59328	0.66528	0.00033916	-1.14	-0.00058119	-0.47475	-0.00024203	509.80330176373235	84.326	2.5006	84.474	83.057	85.557	0.14794					163	57	4	0	0	0	0.7932	1	8122	8122		21.702	0	1	928020			41557	6566	27717	27730	47274	47274					0.08518233758775295
PLAVKLGTITP	11	Unmodified	_PLAVKLGTITP_					0	0	0		nc|ENSG00000058056|Q92995-2|USP13;ENSG00000058056|ENST00000263966|USP13;nc|ENSG00000111667|P45974-2|USP5;ENSG00000111667|ENST00000229268|USP5	nc|ENSG00000058056|Q92995-2|USP13;nc|ENSG00000111667|P45974-2|USP5	nc|ENSG00000111667|P45974-2|USP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.3533325195312	2	555.350074	1108.6856	3.1602	0.001755	2.6303	0.0014608	5.7905	0.0032158	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.77061	1	11003	11003		17.468	0.10304	1	5616800			41558	2598;1041	27718	27731	47275	47275					0.13560035096679712
PLAVKLGTITP	11	Unmodified	_PLAVKLGTITP_					0	0	0		nc|ENSG00000058056|Q92995-2|USP13;ENSG00000058056|ENST00000263966|USP13;nc|ENSG00000111667|P45974-2|USP5;ENSG00000111667|ENST00000229268|USP5	nc|ENSG00000058056|Q92995-2|USP13;nc|ENSG00000111667|P45974-2|USP5	nc|ENSG00000111667|P45974-2|USP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.3538208007812	2	555.350074	1108.6856	1.3083	0.00072658	4.4118	0.0024501	5.7201	0.0031767	555.3524110053091	100.9	2.53	100.95	100.38	102.91	0.046356					182	60	5	0	0	0	0.77061	1	10808	10808		17.468	0.99486	1	5418400			41559	2598;1041	27718	27731	47276	47276					0.13560035096679712
PLAVTLYV	8	Unmodified	_PLAVTLYV_					0	0	0		ENST00000548477.5_1_12:113758555-113770610:-|nuORF;ENST00000553238.5_1_12:113745708-113770716:-|nuORF;nc|ENSG00000089060|Q6J4K2-2|SLC8B1;ENSG00000089060|ENST00000680972|SLC8B1	ENST00000548477.5_1_12:113758555-113770610:-|nuORF	ENST00000548477.5_1_12:113758555-113770610:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.262939453125	2	438.265479	874.516405	-1.2142	-0.00053214	-3.9242	-0.0017198	-5.1384	-0.002252	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.88915	1	3500	3500		35.201	3.6709	1	4828000			41560	1605	27719	27732	47277	47277					0.07412758533951092
PLAVTLYV	8	Unmodified	_PLAVTLYV_					0	0	0		ENST00000548477.5_1_12:113758555-113770610:-|nuORF;ENST00000553238.5_1_12:113745708-113770716:-|nuORF;nc|ENSG00000089060|Q6J4K2-2|SLC8B1;ENSG00000089060|ENST00000680972|SLC8B1	ENST00000548477.5_1_12:113758555-113770610:-|nuORF	ENST00000548477.5_1_12:113758555-113770610:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2626647949219	2	438.265479	874.516405	-1.5833	-0.00069392	-3.2181	-0.0014104	-4.8014	-0.0021043	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.86288	1	2181	2181		26.796	5.0938	1	11160000			41561	1605	27719	27732	47278	47278					0.07412758533951092
PLCCCPAACPE	11	Unmodified	_PLCCCPAACPE_					0	0	0			REV__ENSG00000137310|ENST00000376257|TCF19	REV__ENSG00000137310|ENST00000376257|TCF19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.7122192382812	2	553.710516	1105.40648	0.28158	0.00015592	-0.54878	-0.00030387	-0.2672	-0.00014795	553.7100135451345	30.108	0.6501	30.065	29.776	30.426	-0.043095					25	14	2	0	0	0	0.75495	1	1620	1620		20.947	1.8434	1	30426	+		41562	19377	27720	27733	47279	47279					-0.14200817455071046
PLCCCPAACPE	11	Unmodified	_PLCCCPAACPE_					0	0	0			REV__ENSG00000137310|ENST00000376257|TCF19	REV__ENSG00000137310|ENST00000376257|TCF19	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	553.710516	1105.40648	-0.3753	-0.00020781	-0.42816	-0.00023708	-0.80346	-0.00044488	553.7104319117167	29.64	0.50891	29.671	29.422	29.931	0.030945	-0.25173	0.00030718	NaN	20.947	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23968	+		41563	19377	27720	27733							-0.14200817455071046
PLCCCPAACPE	11	Unmodified	_PLCCCPAACPE_					0	0	0			REV__ENSG00000137310|ENST00000376257|TCF19	REV__ENSG00000137310|ENST00000376257|TCF19	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	553.710516	1105.40648	0.28158	0.00015592	-0.54878	-0.00030387	-0.2672	-0.00014795	553.7100135451345	30.108	0.6501	30.065	29.776	30.426	-0.043095	0.14278	0.0001736	NaN	20.947	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30426	+		41564	19377	27720	27733							-0.14200817455071046
PLCLRLPK	8	Unmodified	_PLCLRLPK_					0	0	0			REV__ENST00000299088.10_1_14:23467769-23467862:-|nuORF	REV__ENST00000299088.10_1_14:23467769-23467862:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.2917175292969	2	470.294048	938.573543	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.828	1	56.9	56.4	57.4	0.071835								0	0	0	0.30252	1	4793	4793		19.36	1.995	1		+		41565	24739	27721	27734	47280	47280					0.10179902538675378
PLCPLGIK	8	Unmodified	_PLCPLGIK_					0	0	0		ENST00000359827.7_1_7:132261243-132261777:-|nuORF	ENST00000359827.7_1_7:132261243-132261777:-|nuORF	ENST00000359827.7_1_7:132261243-132261777:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7554016113281	2	420.754224	839.493896	1.1446	0.00048161	1.1336	0.00047698	2.2783	0.00095859	420.754738227395	20.556	0.54768	20.096	19.732	20.28	-0.4591					21	11	2	0	0	0	0.82464	1	670	670		21.702	0	1	45462			41566	10436	27722	27735	47281	47281					0.06772835864683202
PLCPNWQF	8	Carbamidomethyl (C)	_PLC(Carbamidomethyl (C))PNWQF_	PLC(1)PNWQF		PLC(55)PNWQF		0	1	0			REV__ENST00000450600.1_1_7:56296937-56297204:-|nuORF	REV__ENST00000450600.1_1_7:56296937-56297204:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2461547851562	2	531.247295	1060.48004	0.44676	0.00023734	1.4603	0.00077579	1.9071	0.0010131	531.2478201835319	51.595	0.8789	52.03	51.534	52.413	0.43505					35	20	3	0	0	0	0.94132	1	5127	5127		54.765	6.8491	1	806000	+		41567	26870	27723	27736	47282	47282	330				-0.0477844163442569
PLCQPIPV	8	Carbamidomethyl (C)	_PLC(Carbamidomethyl (C))QPIPV_	PLC(1)QPIPV		PLC(45)QPIPV		0	1	0			REV__ENST00000488520.5_1_3:49348069-49355772:-|nuORF	REV__ENST00000488520.5_1_3:49348069-49355772:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	462.25604248046875	2	462.254588	922.494624	-1.6815	-0.00077729	4.036	0.0018656	2.3544	0.0010883	462.25621077069724	50.777	1.0795	50.777	50.38	51.46	0					48	27	3	0	0	0	0.9159	1	4076	4076		44.531	7.5026	1	317310	+		41568	24493	27724	27737	47283	47283	299				0.030276305137363124
PLDAIWKRIL	10	Unmodified	_PLDAIWKRIL_					0	0	0			REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.879638671875	2	612.876791	1223.73903	3.0905	0.0018941	1.401	0.00085862	4.4914	0.0027527	612.8774407741583	104.71	3.9916	104.67	103.85	107.84	-0.04039					302	94	6	0	0	0	0.67571	1	11480	11480		45.972	1.8554	1	48609000	+		41569	17643	27725	27738	47284	47284					0.1361083259919269
PLDAIWKRIL	10	Unmodified	_PLDAIWKRIL_					0	0	0			REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.87939453125	2	612.876791	1223.73903	0.28934	0.00017733	4.2626	0.0026125	4.5519	0.0027898	612.8792234651027	104.57	3.8669	104.61	104	107.87	0.039864					305	91	6	0	0	0	0.77314	1	11363	11363		40.778	1.5253	1	50996000	+		41570	17643	27725	27738	47285	47285					0.1361083259919269
PLDAIWKRIL	10	Unmodified	_PLDAIWKRIL_					0	0	0			REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	REV__nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.879150390625	2	612.876791	1223.73903	0.91302	0.00055957	3.4829	0.0021346	4.3959	0.0026941	612.8787003590065	104.47	3.5452	104.58	103.94	107.49	0.11684					293	87	6	0	0	0	0.64457	2	11080	11056;11080		47.657	6.8792	1	81912000	+		41571	17643	27725	27738	47286;47287	47287					0.1361083259919269
PLDEETHAG	9	Unmodified	_PLDEETHAG_					0	0	0		ENSG00000163283|ENST00000392027|ALPP	ENSG00000163283|ENST00000392027|ALPP	ENSG00000163283|ENST00000392027|ALPP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.7183532714844	2	484.719621	967.42469	0.76607	0.00037133	-3.3896	-0.001643	-2.6235	-0.0012717	484.71784448733064	98.881	4.1852	99.038	95.672	99.857	0.15659					143	97	2	0	0	0	0.76996	1	10383	10383		33.516	4.3455	1	472970			41572	5778	27726	27739	47288	47288					-0.060325766211803966
PLDEGSHG	8	Unmodified	_PLDEGSHG_					0	0	0			REV__nc|ENSG00000091129|Q92823-5|NRCAM	REV__nc|ENSG00000091129|Q92823-5|NRCAM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.1844177246094	2	406.182675	810.350796	0.058799	2.3883E-05	0.42455	0.00017244	0.48335	0.00019633	406.18265058514055	25.838	0.93217	25.944	25.442	26.374	0.1054					58	44	2	0	0	0	0.81548	1	956	956		20.482	0	1	53576	+		41573	29726	27727	27740	47289	47289					-0.061964999928363795
PLDKVLSVLIK	11	Unmodified	_PLDKVLSVLIK_					0	0	0		nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1;ENSG00000138688|ENST00000679879|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.9324035644531	3	408.935713	1223.78531	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.908	1	16.968	16.468	17.468	0.059269								0	0	0	0.56276	1	198	198		21.78	3.2494	1				41574	14953	27728	27741	47290	47290					0.182368527106064
PLDLTDTKS	9	Unmodified	_PLDLTDTKS_					0	0	0			REV__ENST00000515387.1_1_5:96232124-96244694:+|nuORF	REV__ENST00000515387.1_1_5:96232124-96244694:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.25885009765625	2	495.261122	988.507691	-1.7096	-0.00084669	-2.5715	-0.0012736	-4.2811	-0.0021203	495.25992726495855	40.741	2.1466	41.33	40.797	42.943	0.58915					138	58	4	0	0	0	0.7932	1	3461	3461		25.574	1.0549	1	7011700	+		41575	21066	27729	27742	47291	47291					0.012977401068155814
PLDPTIKYQYL	11	Unmodified	_PLDPTIKYQYL_					0	0	0		nc|ENSG00000182463|Q9NRE2-2|TSHZ2;ENSG00000182463|ENST00000371497|TSHZ2	nc|ENSG00000182463|Q9NRE2-2|TSHZ2	nc|ENSG00000182463|Q9NRE2-2|TSHZ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.24749755859375	3	450.914978	1349.7231	-0.94182	-0.00042468	-0.9828	-0.00044316	-1.9246	-0.00086784	450.9143549515427	37.063	0.66431	37.009	36.694	37.358	-0.053558					38	14	4	0	0	0	0.74405	1	2502	2502		23.378	0.79825	1	185480			41576	7456	27730	27743	47292	47292					0.06223081571624789
PLDQVCGTDN	10	Unmodified	_PLDQVCGTDN_					0	0	0		nc|ENSG00000152583|Q14515-2|SPARCL1;ENSG00000152583|ENST00000282470|SPARCL1	nc|ENSG00000152583|Q14515-2|SPARCL1	nc|ENSG00000152583|Q14515-2|SPARCL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.7777709960938	2	531.232039	1060.44952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.213	1	73.213	72.713	73.713	0								0	0	0	0.45132	1	6584	6584		27.882	2.3082	1				41577	5187	27731	27744	47293	47293					-0.07828264810109431
PLEEVWGY	8	Unmodified	_PLEEVWGY_					0	0	0		nc|ENSG00000120498|Q8IYF3-2|TEX11;ENSG00000120498|ENST00000374333|TEX11;nc|ENSG00000120498|Q8IYF3|TEX11	nc|ENSG00000120498|Q8IYF3-2|TEX11	nc|ENSG00000120498|Q8IYF3-2|TEX11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.7376708984375	2	496.739825	991.465098	0.18271	9.076E-05	-4.0434	-0.0020085	-3.8607	-0.0019177	496.7375174258732	59.457	0.7662	59.425	59.111	59.877	-0.031727					40	18	3	0	0	0	0.9159	1	5589	5589		44.531	2.0566	1	408790			41578	3132	27732	27745	47294	47294					-0.030976102307590736
PLEKKAGH	8	Unmodified	_PLEKKAGH_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2556457519531	2	440.255977	878.497401	-0.15864	-6.9843E-05	-1.2661	-0.0005574	-1.4247	-0.00062724	440.2552769905188	60.568	0.57997	60.556	60.24	60.82	-0.012203					32	14	3	0	0	0	0.86288	1	5622	5622		26.796	3.7536	1	187610			41579	2259	27733	27746	47295	47295					0.05329221962904285
PLELVLPLSVN	11	Unmodified	_PLELVLPLSVN_					0	0	0			REV__nc|ENSG00000170185|Q8NB14-2|USP38	REV__nc|ENSG00000170185|Q8NB14-2|USP38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.358642578125	2	597.360639	1192.70673	-0.56757	-0.00033904	-3.2632	-0.0019493	-3.8308	-0.0022883	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.69995	1	10670	10670		31.53	3.4483	1	3951300	+		41580	21634	27734	27747	47296	47296					0.11808000405517305
PLENLRIIRGT	11	Unmodified	_PLENLRIIRGT_					0	0	0		nc|ENSG00000178568|Q15303-4|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-2|ERBB4;ENSG00000178568|ENST00000342788|ERBB4;ENST00000484594.5_1_2:212426591-213403254:-|nuORF	nc|ENSG00000178568|Q15303-4|ERBB4	nc|ENSG00000178568|Q15303-4|ERBB4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.3843994140625	2	641.385511	1280.75647	0.021057	1.3506E-05	-1.875	-0.0012026	-1.8539	-0.0011891	641.3839926266708	102.89	1.2885	102.89	102.43	103.72	0					63	31	4	0	0	0	0.68532	1	10523	10523		33.922	0	1	1374800			41581	7212	27735	27748	47297	47297					0.1273212813414375
PLENLRIIRGT	11	Unmodified	_PLENLRIIRGT_					0	0	0		nc|ENSG00000178568|Q15303-4|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-2|ERBB4;ENSG00000178568|ENST00000342788|ERBB4;ENST00000484594.5_1_2:212426591-213403254:-|nuORF	nc|ENSG00000178568|Q15303-4|ERBB4	nc|ENSG00000178568|Q15303-4|ERBB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.3849487304688	2	641.385511	1280.75647	2.7088	0.0017374	-4.3584	-0.0027954	-1.6496	-0.001058	641.3824552667398	102.77	1.4212	102.72	102.34	103.76	-0.046997					84	34	4	0	0	0	0.7144	1	11237	11237		29.17	0	1	1908400			41582	7212	27735	27748	47298	47298					0.1273212813414375
PLENLRIIRGT	11	Unmodified	_PLENLRIIRGT_					0	0	0		nc|ENSG00000178568|Q15303-4|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-2|ERBB4;ENSG00000178568|ENST00000342788|ERBB4;ENST00000484594.5_1_2:212426591-213403254:-|nuORF	nc|ENSG00000178568|Q15303-4|ERBB4	nc|ENSG00000178568|Q15303-4|ERBB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.3869018554688	2	641.385511	1280.75647	0.94064	0.00060331	-2.5694	-0.001648	-1.6287	-0.0010447	641.3834906355922	102.59	0.76495	102.72	102.3	103.06	0.13293					58	18	4	0	0	0	0.65746	1	10841	10841		37.812	0	1	1429800			41583	7212	27735	27748	47299	47299					0.1273212813414375
PLENLRIIRGT	11	Unmodified	_PLENLRIIRGT_					0	0	0		nc|ENSG00000178568|Q15303-4|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-2|ERBB4;ENSG00000178568|ENST00000342788|ERBB4;ENST00000484594.5_1_2:212426591-213403254:-|nuORF	nc|ENSG00000178568|Q15303-4|ERBB4	nc|ENSG00000178568|Q15303-4|ERBB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.3845825195312	2	641.385511	1280.75647	-1.1549	-0.00074073	-0.56975	-0.00036543	-1.7246	-0.0011062	641.3847498029768	102.62	1.032	102.75	102.41	103.44	0.13569					59	25	4	0	0	0	0.62614	1	10778	10778		41.427	11.109	1	1426400			41584	7212	27735	27748	47300	47300					0.1273212813414375
PLEPAVIRK	9	Unmodified	_PLEPAVIRK_					0	0	0			REV__ENST00000372870.5_1_9:131122965-131123439:+|nuORF	REV__ENST00000372870.5_1_9:131122965-131123439:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.8212890625	2	511.821484	1021.62842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.734	1	80.877	80.377	81.377	0.14352								0	0	0	0.3465	1	7709	7709		15.642	1.8665	1		+		41585	25735	27736	27749	47301	47301					0.11846612610952434
PLETIVIIN	9	Unmodified	_PLETIVIIN_					0	0	0		ENSG00000145860|ENST00000424310|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145	ENSG00000145860|ENST00000424310|RNF145	ENSG00000145860|ENST00000424310|RNF145	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.2662353515625	2	506.307875	1010.6012	-0.034325	-1.7379E-05	2.0705	0.0010483	2.0362	0.0010309	506.81028458650053	51.289	1.1279	51.724	51.285	52.413	0.43505					37	26	2	0	0	0	0.20789	1	5076	5076		23.042	1.0826	1	140820			41586	4798	27737	27750	47302	47302					0.09632084279905939
PLETVGRTVVA	11	Unmodified	_PLETVGRTVVA_					0	0	0		ENST00000469172.5_1_10:70091580-70091955:+|nuORF	ENST00000469172.5_1_10:70091580-70091955:+|nuORF	ENST00000469172.5_1_10:70091580-70091955:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	571.3308715820312	2	571.332413	1140.65027	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.041	1	71.041	70.541	71.541	0								0	0	0	0.56276	1	6331	6331		25.574	1.0549	1				41587	12191	27738	27751	47303	47303					0.08557372568884603
PLEVEGGEN	9	Unmodified	_PLEVEGGEN_					0	0	0			REV__ENST00000452906.3_1_3:42845709-42845868:-|nuORF	REV__ENST00000452906.3_1_3:42845709-42845868:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2213439941406	2	472.221997	942.429441	-1.0231	-0.00048314	1.3924	0.00065754	0.36932	0.0001744	472.22256154509336	38.81	0.52143	38.82	38.524	39.046	0.010708					29	15	2	0	0	0	0.38563	3	2337	2310;2318;2337		58.782	13.694	1	181230	+		41588	26906	27739	27752	47304;47305;47306	47306					-0.04407692478412173
PLEVEGGEN	9	Unmodified	_PLEVEGGEN_					0	0	0			REV__ENST00000452906.3_1_3:42845709-42845868:-|nuORF	REV__ENST00000452906.3_1_3:42845709-42845868:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.220947265625	2	472.221997	942.429441	0.21504	0.00010155	-0.092078	-4.3481E-05	0.12296	5.8067E-05	472.2219574332987	38.584	0.60174	38.678	38.396	38.997	0.094322					38	18	3	0	0	0	0.51307	1	2292	2292		51.335	1.8939	1	210410	+		41589	26906	27739	27752	47307	47307					-0.04407692478412173
PLEVEGGEN	9	Unmodified	_PLEVEGGEN_					0	0	0			REV__ENST00000452906.3_1_3:42845709-42845868:-|nuORF	REV__ENST00000452906.3_1_3:42845709-42845868:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2224426269531	2	472.221997	942.429441	0.048074	2.2702E-05	0.43805	0.00020686	0.48613	0.00022956	472.2221629933996	38.668	0.64296	38.615	38.293	38.936	-0.052727					33	19	2	0	0	0	0.69914	1	2319	2319		40.573	8.6178	1	163440	+		41590	26906	27739	27752	47308	47308					-0.04407692478412173
PLEYKLRKM	9	Unmodified	_PLEYKLRKM_					0	0	0			REV__ENST00000336053.10_1_14:21677721-21677769:-|nuORF	REV__ENST00000336053.10_1_14:21677721-21677769:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3434448242188	2	589.341726	1176.6689	0.15554	9.1664E-05	1.9962	0.0011764	2.1517	0.0012681	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.76764	1	11469	11469		34.173	3.8548	1	10540000	+		41591	25175	27740	27753	47309	47309					0.08763210939059718
PLFKEVSFL	9	Unmodified	_PLFKEVSFL_					0	0	0			REV__nc|ENSG00000103544|Q7Z3J2-2|VPS35L	REV__nc|ENSG00000103544|Q7Z3J2-2|VPS35L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3110961914062	2	540.310418	1078.60628	1.0096	0.00054552	1.1578	0.00062557	2.1674	0.0011711	540.3108265870129	17.184	0.38091	17.102	16.966	17.347	-0.0821					33	15	3	0	0	0	0.78058	1	214	214		30.504	1.3541	1	134770	+		41592	17420	27741	27754	47310	47310					0.07012388142516102
PLFKIGHKRR	10	Unmodified	_PLFKIGHKRR_					0	0	0		nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4	nc|ENSG00000125257|O15439-2|ABCC4	nc|ENSG00000125257|O15439-2|ABCC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3919677734375	2	626.393474	1250.77239	2.3084	0.0014459	3.2426	0.0020312	5.551	0.0034771	626.3953217408156	109.92	1.4097	109.98	109.55	110.95	0.06794					99	57	2	0	0	0	0.85939	1	13375	13375		23.042	3.0457	1	615360			41593	3378	27742	27755	47311	47311					0.1570387916171967
PLFPLLLELQA	11	Unmodified	_PLFPLLLELQA_					0	0	0			REV__ENSG00000113300|ENST00000261951|CNOT6	REV__ENSG00000113300|ENST00000261951|CNOT6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3847045898438	2	627.378832	1252.74311	0.9795	0.00061452	4.2538	0.0026687	5.2333	0.0032833	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.69995	1	12650	12650		31.53	2.3598	1	19815000	+		41594	17988	27743	27756	47312	47312					0.126848773022175
PLFPLLLELQA	11	Unmodified	_PLFPLLLELQA_					0	0	0			REV__ENSG00000113300|ENST00000261951|CNOT6	REV__ENSG00000113300|ENST00000261951|CNOT6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3845825195312	2	627.378832	1252.74311	6.5831	0.0041301	-0.5771	-0.00036206	6.006	0.0037681	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.75921	1	13797	13797		19.997	0	1	94412	+		41595	17988	27743	27756	47313	47313					0.126848773022175
PLFPLLRAVLA	11	Unmodified	_PLFPLLRAVLA_					0	0	0			REV__ENSG00000229474|ENST00000682850|PATL2	REV__ENSG00000229474|ENST00000682850|PATL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	605.3896484375	2	605.389534	1208.76451	-1.0119	-0.00061261	1.4759	0.00089349	0.46397	0.00028088	605.3903055636187	44.786	1.0425	44.786	44.46	45.502	0					57	25	3	0	0	0	0.60687	1	3300	3300		26.693	0	1	158280	+		41596	23752	27744	27757	47314	47314					0.16848307121586004
PLFPLLRAVLA	11	Unmodified	_PLFPLLRAVLA_					0	0	0			REV__ENSG00000229474|ENST00000682850|PATL2	REV__ENSG00000229474|ENST00000682850|PATL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.92974853515625	3	403.928781	1208.76451	0.41682	0.00016837	1.3719	0.00055414	1.7887	0.0007225	403.92919444194524	46.164	0.84489	46.636	46.254	47.099	0.47139					60	20	4	0	0	0	0.78683	1	4318	4318		14.086	0	1	1771500	+		41597	23752	27744	27757	47315	47315					0.16848307121586004
PLFPLLRAVLA	11	Unmodified	_PLFPLLRAVLA_					0	0	0			REV__ENSG00000229474|ENST00000682850|PATL2	REV__ENSG00000229474|ENST00000682850|PATL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.173583984375	2	605.389534	1208.76451	-0.077766	-4.7079E-05	0.64571	0.00039091	0.56795	0.00034383	605.3899254091007	44.519	1.8309	44.982	44.495	46.326	0.46313					107	44	3	0	0	0	0.17318	1	4075	4075		19.104	0	1	901750	+		41598	23752	27744	27757	47316	47316					0.16848307121586004
PLFPLLRAVLA	11	Unmodified	_PLFPLLRAVLA_					0	0	0			REV__ENSG00000229474|ENST00000682850|PATL2	REV__ENSG00000229474|ENST00000682850|PATL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	606.1736450195312	2	605.389534	1208.76451	-0.97403	-0.00058967	1.372	0.0008306	0.39797	0.00024093	605.3903602132575	44.4	1.6601	45.245	44.736	46.396	0.84438					104	40	3	0	0	0	0.1725	1	4107	4107		14.865	0	1	966210	+		41599	23752	27744	27757	47317	47317					0.16848307121586004
PLFPPAEPL	9	Unmodified	_PLFPPAEPL_					0	0	0			REV__ENSG00000165684|ENST00000684778|SNAPC4	REV__ENSG00000165684|ENST00000684778|SNAPC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.2849426269531	2	490.776211	979.537869	-1.2285	-0.00060293	-3.4582	-0.0016972	-4.6868	-0.0023002	490.77446529780053	60.343	0.56255	60.732	60.411	60.974	0.38945					26	15	2	0	0	0	0.20789	1	6373	6373		12.959	2.6939	1	440570	+		41600	21207	27745	27758	47318	47318					0.04728143562670084
PLFPVFLF	8	Unmodified	_PLFPVFLF_					0	0	0		ENST00000393784.7_1_5:172377848-172378373:+|nuORF	ENST00000393784.7_1_5:172377848-172378373:+|nuORF	ENST00000393784.7_1_5:172377848-172378373:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.2860412597656	2	490.286214	978.557876	-0.71886	-0.00035245	1.4585	0.00071507	0.73962	0.00036263	490.28587019838415	60.046	0.61252	60.6	60.279	60.891	0.55323					31	16	3	0	0	0	0.84567	1	6377	6377		24.504	0	1	476690			41601	11052	27746	27759	47319	47319					0.06773939293270814
PLFQALIDGSR	11	Unmodified	_PLFQALIDGSR_					0	0	0		ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-3|CBLB;nc|ENSG00000114423|Q13191-2|CBLB	ENSG00000114423|ENST00000394030|CBLB	ENSG00000114423|ENST00000394030|CBLB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.8372192382812	2	608.837862	1215.66117	2.5761	0.0015685	-3.1594	-0.0019236	-0.58329	-0.00035513	608.8357109486794	111.04	0.51165	111.08	110.8	111.31	0.041832					34	15	3	0	0	0	0.75921	1	13434	13434		19.997	5.1319	1	200410			41602	2769	27747	27760	47320	47320					0.06196774943123273
PLFRPLFRNH	10	Unmodified	_PLFRPLFRNH_					0	0	0			REV__ENST00000577684.1_1_17:18314705-18315443:+|nuORF	REV__ENST00000577684.1_1_17:18314705-18315443:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.8721313476562	2	648.869831	1295.72511	1.6012	0.0010389	1.321	0.00085714	2.9221	0.0018961	648.8707405027678	99.281	2.2066	99.504	98.61	100.82	0.22262					133	51	3	0	0	0	0.85934	1	10345	10345		35.618	7.736	1	269640	+		41603	29013	27748	27761	47321	47321					0.08907599890744677
PLFSGLVI	8	Unmodified	_PLFSGLVI_					0	0	0		ENST00000273814.7_1_4:953005-953860:-|nuORF	ENST00000273814.7_1_4:953005-953860:-|nuORF	ENST00000273814.7_1_4:953005-953860:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	423.2592468261719	2	423.260197	844.50584	0.78672	0.00033299	-1.8847	-0.00079771	-1.0979	-0.00046472	423.2594053934692	21.391	1.0361	21.459	20.78	21.816	0.068251					65	37	3	0	0	0	0.92774	1	580	580		49.211	2.4444	1	69038			41604	9581	27749	27762	47322	47322					0.07736775879516244
PLFSNLPF	8	Unmodified	_PLFSNLPF_					0	0	0		nc|ENSG00000160058|Q9NW68-2|BSDC1	nc|ENSG00000160058|Q9NW68-2|BSDC1	nc|ENSG00000160058|Q9NW68-2|BSDC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.75299072265625	2	467.755278	933.496004	-1.5655	-0.00073227	-2.8757	-0.0013451	-4.4412	-0.0020774	467.75393782612105	56.605	0.85083	56.605	56.397	57.248	0					52	39	2	0	0	0	0.90465	1	4848	4848		40.573	0	1	386030			41605	15034	27750	27763	47323	47323					0.02659587874143199
PLFTPAPFV	9	Unmodified	_PLFTPAPFV_					0	0	0			REV__ENST00000535170.5_1_7:99637006-99637141:+|nuORF	REV__ENST00000535170.5_1_7:99637006-99637141:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.78082275390625	2	494.778754	987.542954	-0.98597	-0.00048784	4.4639	0.0022086	3.4779	0.0017208	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.76996	1	8367	8367		33.516	9.0116	1	385180	+		41606	28380	27751	27764	47324	47324					0.048684474252809196
PLFTPAPFV	9	Unmodified	_PLFTPAPFV_					0	0	0			REV__ENST00000535170.5_1_7:99637006-99637141:+|nuORF	REV__ENST00000535170.5_1_7:99637006-99637141:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7809143066406	2	494.778754	987.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.525	1	83.672	83.172	84.172	0.14694								0	0	0	0.31472	1	8095	8095		25.45	4.9683	1		+		41607	28380	27751	27764	47325	47325					0.048684474252809196
PLFVGRKAS	9	Unmodified	_PLFVGRKAS_					0	0	0			REV__ENSG00000139985|ENST00000603540|ADAM21	REV__ENSG00000139985|ENST00000603540|ADAM21	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.790771484375	2	487.792727	973.5709	-1.0481	-0.00051127	-3.1066	-0.0015154	-4.1547	-0.0020267	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.76255	1	8034	8034		35.618	6.4687	1	1176800	+		41608	19588	27752	27765	47326	47326					0.08305770405377189
PLFVGRKAS	9	Unmodified	_PLFVGRKAS_					0	0	0			REV__ENSG00000139985|ENST00000603540|ADAM21	REV__ENSG00000139985|ENST00000603540|ADAM21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7905578613281	2	487.792727	973.5709	-1.3135	-0.00064074	-3.0168	-0.0014716	-4.3304	-0.0021123	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.78058	1	8490	8490		30.504	6.3009	1	2239000	+		41609	19588	27752	27765	47327	47327					0.08305770405377189
PLFVGRKAS	9	Unmodified	_PLFVGRKAS_					0	0	0			REV__ENSG00000139985|ENST00000603540|ADAM21	REV__ENSG00000139985|ENST00000603540|ADAM21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.79107666015625	2	487.792727	973.5709	-0.24073	-0.00011743	-3.9662	-0.0019347	-4.2069	-0.0020521	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.77546	1	10007	10007		31.955	3.7006	1	1981400	+		41610	19588	27752	27765	47328	47328					0.08305770405377189
PLGCALILGG	10	Unmodified	_PLGCALILGG_					0	0	0			REV__ENSG00000184113|ENST00000618236|CLDN5	REV__ENSG00000184113|ENST00000618236|CLDN5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2626647949219	2	457.262413	912.510274	0.21557	9.8573E-05	3.9999	0.001829	4.2155	0.0019276	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.85976	1	7883	7883		35.201	2.3883	1	1366100	+		41611	22645	27753	27766	47329	47329					0.05051917030800723
PLGGAAAHLG	10	Unmodified	_PLGGAAAHLG_					0	0	0			REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.2416076660156	2	432.240327	862.466101	-1.6892	-0.00073014	1.8827	0.00081377	0.19348	8.3628E-05	432.2411170705839	40.908	0.60476	40.913	40.753	41.358	0.0044022					34	22	2	0	0	0	0.86786	1	2641	2641		26.796	2.2921	1	192920	+		41612	25249	27754	27767	47330	47330					0.029366489287895092
PLGGAAAHLG	10	Unmodified	_PLGGAAAHLG_					0	0	0			REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	432.240327	862.466101	0.18828	8.1384E-05	-0.40161	-0.00017359	-0.21333	-9.2209E-05	432.24002354779293	41.032	1.0047	41.001	40.375	41.38	-0.030991	0.072139	-0.0006027	NaN	26.796	38	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	255770	+		41613	25249	27754	27767							0.029366489287895092
PLGGAAAHLG	10	Unmodified	_PLGGAAAHLG_					0	0	0			REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	432.240327	862.466101	-1.3127	-0.0005674	0.83816	0.00036229	-0.47453	-0.00020511	432.2405531255648	41.019	1.0734	40.978	40.142	41.215	-0.040806	0.049537	0.00046906	NaN	26.796	41	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	258920	+		41614	25249	27754	27767							0.029366489287895092
PLGGAAAHLG	10	Unmodified	_PLGGAAAHLG_					0	0	0			REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	432.240327	862.466101	0.41277	0.00017842	-1.0846	-0.00046882	-0.67187	-0.00029041	432.2396876369609	40.873	1.2279	40.88	40.195	41.423	0.0065727	-0.049162	-0.0011932	NaN	26.796	44	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	238950	+		41615	25249	27754	27767							0.029366489287895092
PLGGAAAHLG	10	Unmodified	_PLGGAAAHLG_					0	0	0			REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	432.240327	862.466101	-1.6892	-0.00073014	1.8827	0.00081377	0.19348	8.3628E-05	432.2411170705839	40.908	0.60476	40.913	40.753	41.358	0.0044022	-0.016102	0.001372	NaN	26.796	34	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	192920	+		41616	25249	27754	27767							0.029366489287895092
PLGGAAAHLG	10	Unmodified	_PLGGAAAHLG_					0	0	0			REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	432.240327	862.466101	-1.9543	-0.00084471	1.2162	0.0005257	-0.73803	-0.00031901	432.2409194058559	40.508	0.34502	40.9	40.687	41.032	0.39209	-0.028686	0.00079588	NaN	26.796	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310410	+		41617	25249	27754	27767							0.029366489287895092
PLGGAAAHLG	10	Unmodified	_PLGGAAAHLG_					0	0	0			REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	REV__ENST00000340634.4_1_3:142681054-142682041:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	432.240327	862.466101	-1.1144	-0.00048167	0.21188	9.1582E-05	-0.90249	-0.00039009	432.2403456841784	40.312	0.94174	40.901	40.174	41.116	0.58915	-0.027726	-7.235E-05	NaN	26.796	28	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	255640	+		41618	25249	27754	27767							0.029366489287895092
PLGGERPF	8	Unmodified	_PLGGERPF_					0	0	0		nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;ENSG00000064042|ENST00000503057|LIMCH1	nc|ENSG00000064042|Q9UPQ0-9|LIMCH1	nc|ENSG00000064042|Q9UPQ0-9|LIMCH1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7347717285156	2	436.734877	871.455202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.222	1	26.184	25.684	26.684	-0.038523								0	0	0	0.29568	1	1165	1165		35.201	4.6971	1				41619	1097	27755	27768	47331	47331					0.01433246554518064
PLGGLVLSI	9	Unmodified	_PLGGLVLSI_					0	0	0			REV__ENSG00000267534|ENST00000646641|S1PR2	REV__ENSG00000267534|ENST00000646641|S1PR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2509765625	2	434.778754	867.542954	0.31067	0.00013507	0.92573	0.00040249	1.2364	0.00053756	434.77851041873436	81.16	0.6936	81.66	81.339	82.033	0.49967					22	16	2	0	0	0	0.20789	1	9373	9373		19.36	5.9059	1	55502	+		41620	23969	27756	27769	47332	47332					0.10388447425293634
PLGGRLRKLSL	11	Unmodified	_PLGGRLRKLSL_					0	0	0		nc|ENSG00000136205|Q68CZ2-2|TNS3;ENSG00000136205|ENST00000311160|TNS3	nc|ENSG00000136205|Q68CZ2-2|TNS3	nc|ENSG00000136205|Q68CZ2-2|TNS3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9288635253906	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.858	1	47.769	47.269	48.269	-0.089046								0	0	0	0.56276	1	3608	3608		8.7993	0.76496	1				41621	4096	27757	27770	47333	47333					0.1756903972204782
PLGGRPRNGWV	11	Unmodified	_PLGGRPRNGWV_					0	0	0		ENST00000342572.12_1_17:80400632-80400818:-|nuORF	ENST00000342572.12_1_17:80400632-80400818:-|nuORF	ENST00000342572.12_1_17:80400632-80400818:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.56036376953125	3	403.559751	1207.65742	2.8514	0.0011507	-2.1435	-0.00086505	0.70785	0.00028566	403.5587881215693	22.775	1.0826	22.725	22.354	23.437	-0.050077					94	41	3	0	0	0	0.732	1	751	751		26.063	0.9956	1	140620			41622	10262	27758	27771	47334	47334					0.06190149959934388
PLGLAGAAH	9	Unmodified	_PLGLAGAAH_					0	0	0			REV__ENSG00000261150|ENST00000615648|EPPK1	REV__ENSG00000261150|ENST00000615648|EPPK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.7306213378906	2	403.729595	805.444637	1.7257	0.0006967	0.41632	0.00016808	2.142	0.00086478	403.7296654256628	99.693	1.8198	100.06	99.055	100.87	0.36292					95	45	3	0	0	0	0.78292	2	12069	12069;12081		29.842	6.0661	1	752370	+		41623	23941	27759	27772	47335;47336	47335					0.034132639000858944
PLGLLIGVLG	10	Unmodified	_PLGLLIGVLG_					0	0	0		ENST00000377316.6_1_11:64577738-64577933:-|nuORF	ENST00000377316.6_1_11:64577738-64577933:-|nuORF	ENST00000377316.6_1_11:64577738-64577933:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.31787109375	2	476.315503	950.616454	-1.6177	-0.00077053	3.7763	0.0017987	2.1586	0.0010282	476.31714645591177	49.778	1.1441	49.778	49.395	50.539	0					34	26	2	0	0	0	0.87636	1	3969	3969		12.959	0	1	47080			41624	10835	27760	27773	47337	47337					0.1391699586777122
PLGLLTSY	8	Unmodified	_PLGLLTSY_					0	0	0			REV__ENSG00000165376|ENST00000336803|CLDN2	REV__ENSG00000165376|ENST00000336803|CLDN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.24609375	2	432.247286	862.48002	-0.17074	-7.3802E-05	-0.81396	-0.00035183	-0.9847	-0.00042564	432.24716926494176	98.219	1.1881	98.276	97.88	99.068	0.056839					57	26	3	0	0	0	0.89457	1	10379	10379		37.028	0	1	388720	+		41625	21177	27761	27774	47338	47338					0.04327881637232167
PLGLLTSY	8	Unmodified	_PLGLLTSY_					0	0	0			REV__ENSG00000165376|ENST00000336803|CLDN2	REV__ENSG00000165376|ENST00000336803|CLDN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.2467346191406	2	432.247286	862.48002	-1.5831	-0.0006843	1.0335	0.00044675	-0.54957	-0.00023755	432.2477437889501	97.848	1.4004	98.075	97.569	98.969	0.22788					76	31	5	0	0	0	0.82464	3	10134	10123;10134;10183		46.766	9.738	1	626180	+		41626	21177	27761	27774	47339;47340;47341	47340					0.04327881637232167
PLGLLTSY	8	Unmodified	_PLGLLTSY_					0	0	0			REV__ENSG00000165376|ENST00000336803|CLDN2	REV__ENSG00000165376|ENST00000336803|CLDN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.2466125488281	2	432.247286	862.48002	-1.8339	-0.00079269	1.4654	0.00063343	-0.36844	-0.00015926	432.24785776580563	97.992	1.1927	98.188	97.805	98.997	0.19585					63	26	3	0	0	0	0.86791	3	10138	10127;10138;10152		37.028	0	1	609590	+		41627	21177	27761	27774	47342;47343;47344	47343					0.04327881637232167
PLGLLTSY	8	Unmodified	_PLGLLTSY_					0	0	0			REV__ENSG00000165376|ENST00000336803|CLDN2	REV__ENSG00000165376|ENST00000336803|CLDN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2469177246094	2	432.247286	862.48002	1.4323	0.0006191	-2.1406	-0.00092526	-0.70829	-0.00030616	432.2464138290426	97.895	1.475	98.281	97.765	99.24	0.38548					115	35	5	0	0	0	0.89457	2	11737	11737;11748		37.028	0	1	6652700	+		41628	21177	27761	27774	47345;47346	47345					0.04327881637232167
PLGLLTSY	8	Unmodified	_PLGLLTSY_					0	0	0			REV__ENSG00000165376|ENST00000336803|CLDN2	REV__ENSG00000165376|ENST00000336803|CLDN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.246826171875	2	432.247286	862.48002	1.6286	0.00070397	-2.2133	-0.00095671	-0.58472	-0.00025274	432.24636827465696	97.973	1.4306	98.35	97.873	99.304	0.37679					103	34	5	0	0	0	0.92176	2	11857	11857;11869		46.766	11.566	1	6519900	+		41629	21177	27761	27774	47347;47348	47347					0.04327881637232167
PLGLSQVH	8	Unmodified	_PLGLSQVH_					0	0	0		ENST00000432667.5_1_2:676024-676177:-|nuORF	ENST00000432667.5_1_2:676024-676177:-|nuORF	ENST00000432667.5_1_2:676024-676177:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7422180175781	2	425.742702	849.470852	0.10508	4.4737E-05	-1.0333	-0.00043993	-0.92823	-0.00039519	425.7419623603288	77.928	2.2687	78.491	77.83	80.099	0.56332					94	53	4	0	0	0	0.73619	1	8915	8915		65.897	0	1	2336700			41630	11673	27762	27775	47349	47349					0.04009533071575788
PLGLSSLWMSQ	11	Unmodified	_PLGLSSLWMSQ_					0	0	0		ENST00000270357.9_2_2:241517616-241518690:+|nuORF	ENST00000270357.9_2_2:241517616-241518690:+|nuORF	ENST00000270357.9_2_2:241517616-241518690:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.8790283203125	3	406.877758	1217.61144	-0.40526	-0.00016489	3.9933	0.0016248	3.588	0.0014599	406.8793197462454	18.556	0.75912	18.479	18.264	19.023	-0.07671					46	22	4	0	0	0	0.6396	1	320	320		39.873	1.1591	1	489230			41631	9553	27763	27776	47350	47350					0.011343239428242669
PLGPPLKI	8	Unmodified	_PLGPPLKI_					0	0	0			REV__ENSG00000099331|ENST00000682292|MYO9B	REV__ENSG00000099331|ENST00000682292|MYO9B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.2971496582031	2	417.776014	833.537475	-0.18844	-7.8726E-05	3.158	0.0013194	2.9696	0.0012406	417.77533576989697	68.428	0.084091	68.45	68.39	68.475	0.021599					5	3	2	0	0	0	0.4196	1	6460	6460		14.664	0	1	15583	+		41632	17092	27764	27777	47351	47351					0.11404768633474305
PLGPPRPPGT	10	Unmodified	_PLGPPRPPGT_					0	0	0			REV__ENST00000438808.1_1_1:11938291-11938936:+|nuORF	REV__ENST00000438808.1_1_1:11938291-11938936:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.78179931640625	2	494.782359	987.550165	-0.60063	-0.00029718	-3.4065	-0.0016855	-4.0071	-0.0019826	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.86471	1	8365	8365		30.318	2.4355	1	707910	+		41633	26725	27765	27778	47352	47352					0.05589180025708629
PLGQVLVRPFV	11	Unmodified	_PLGQVLVRPFV_					0	0	0		nc|ENSG00000048342|Q9P2K1-2|CC2D2A;ENSG00000048342|ENST00000424120|CC2D2A	nc|ENSG00000048342|Q9P2K1-2|CC2D2A	nc|ENSG00000048342|Q9P2K1-2|CC2D2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.9220275878906	3	408.920286	1223.73903	2.7179	0.0011114	2.0537	0.00083978	4.7716	0.0019512	408.92110256360985	104.72	4.0561	104.68	103.08	107.14	-0.04039					239	96	4	0	0	0	0.75495	1	11536	11536		30.569	13.402	1	3838400			41634	973	27766	27779	47353	47353					0.13610832599169953
PLGRLALK	8	Unmodified	_PLGRLALK_					0	0	0		ENSG00000187024|ENST00000543175|PTRH1	ENSG00000187024|ENST00000543175|PTRH1	ENSG00000187024|ENST00000543175|PTRH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.2923889160156	2	434.292362	866.570172	-0.48761	-0.00021177	0.62778	0.00027264	0.14017	6.0874E-05	434.2925241938926	74.232	1.208	74.188	73.785	74.993	-0.043877					66	42	2	0	0	0	0.80706	1	7279	7279		19.36	0	1	735640			41635	7835	27767	27780	47354	47354					0.13154975756310705
PLGRLALK	8	Unmodified	_PLGRLALK_					0	0	0		ENSG00000187024|ENST00000543175|PTRH1	ENSG00000187024|ENST00000543175|PTRH1	ENSG00000187024|ENST00000543175|PTRH1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.292362	866.570172	-1.3784	-0.00059863	1.6965	0.00073677	0.31809	0.00013814	434.2929843613502	74.534	0.88062	74.534	74.138	75.018	0	0.2597	0.00075072	NaN	19.36	64	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	352220			41636	7835	27767	27780							0.13154975756310705
PLGRLALK	8	Unmodified	_PLGRLALK_					0	0	0		ENSG00000187024|ENST00000543175|PTRH1	ENSG00000187024|ENST00000543175|PTRH1	ENSG00000187024|ENST00000543175|PTRH1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	434.292362	866.570172	-1.3365	-0.00058044	1.4956	0.00064951	0.15904	6.9069E-05	434.2928799544304	74.19	1.0466	74.276	73.895	74.942	0.085907	0.0021073	0.00057621	NaN	19.36	77	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1072300			41637	7835	27767	27780							0.13154975756310705
PLGRLGRPGQL	11	Unmodified	_PLGRLGRPGQL_					0	0	0			REV__ENSG00000092758|ENST00000649368|COL9A3	REV__ENSG00000092758|ENST00000649368|COL9A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3534545898438	2	582.354014	1162.69348	0.75692	0.00044079	-1.142	-0.00066503	-0.38505	-0.00022424	582.3532376593708	103.08	2.584	103.3	103	105.58	0.22556					189	68	3	0	0	0	0.6921	1	12713	12713		32.812	1.2826	1	7736200	+		41638	17037	27768	27781	47355	47355					0.11863607136797327
PLGRRARIRQS	11	Unmodified	_PLGRRARIRQS_					0	0	0			REV__ENSG00000172183|ENST00000306072|ISG20	REV__ENSG00000172183|ENST00000306072|ISG20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677917480469	3	437.268971	1308.78508	-0.071191	-3.113E-05	-2.4084	-0.0010531	-2.4796	-0.0010843	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.75121	1	4459	4459		21.78	3.9473	1	3270700	+		41639	21808	27769	27782	47356	47356					0.14304290553968713
PLGRRARIRQS	11	Unmodified	_PLGRRARIRQS_					0	0	0			REV__ENSG00000172183|ENST00000306072|ISG20	REV__ENSG00000172183|ENST00000306072|ISG20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2679138183594	3	437.268971	1308.78508	1.1681	0.00051075	-3.7096	-0.0016221	-2.5416	-0.0011114	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.77511	2	4464	4452;4464		16.53	2.9632	1	4130900	+		41640	21808	27769	27782	47357;47358	47358					0.14304290553968713
PLGRRARIRQS	11	Unmodified	_PLGRRARIRQS_					0	0	0			REV__ENSG00000172183|ENST00000306072|ISG20	REV__ENSG00000172183|ENST00000306072|ISG20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2678527832031	3	437.268971	1308.78508	-1.5729	-0.00068777	-0.86313	-0.00037742	-2.436	-0.0010652	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.77511	1	4100	4100		16.53	0.6092	1	4358700	+		41641	21808	27769	27782	47359	47359					0.14304290553968713
PLGRRARIRQS	11	Unmodified	_PLGRRARIRQS_					0	0	0			REV__ENSG00000172183|ENST00000306072|ISG20	REV__ENSG00000172183|ENST00000306072|ISG20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.267822265625	3	437.268971	1308.78508	0.29718	0.00012995	-2.7709	-0.0012116	-2.4737	-0.0010817	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.75121	2	4159	4114;4159		21.78	3.2494	1	4533800	+		41642	21808	27769	27782	47360;47361	47361					0.14304290553968713
PLGRRARIRQS	11	Unmodified	_PLGRRARIRQS_					0	0	0			REV__ENSG00000172183|ENST00000306072|ISG20	REV__ENSG00000172183|ENST00000306072|ISG20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2676086425781	3	437.268971	1308.78508	0.31383	0.00013723	-2.9518	-0.0012907	-2.638	-0.0011535	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.77803	1	4364	4364		15.921	2.4127	1	2521600	+		41643	21808	27769	27782	47362	47362					0.14304290553968713
PLGRRARIRQS	11	Unmodified	_PLGRRARIRQS_					0	0	0			REV__ENSG00000172183|ENST00000306072|ISG20	REV__ENSG00000172183|ENST00000306072|ISG20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.266845703125	3	437.268971	1308.78508	0.02954	1.2917E-05	-2.6658	-0.0011657	-2.6363	-0.0011528	437.26770833059527	48.1	1.3181	49.023	48.466	49.784	0.92315					115	32	4	0	0	0	0.72892	1	4739	4739		26.75	8.9166	1	3276900	+		41644	21808	27769	27782	47363	47363					0.14304290553968713
PLGVAFRG	8	Unmodified	_PLGVAFRG_					0	0	0		ENST00000409031.5_3_2:130939329-130940025:-|nuORF	ENST00000409031.5_3_2:130939329-130940025:-|nuORF	ENST00000409031.5_3_2:130939329-130940025:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.73974609375	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.86288	1	1831	1831		26.796	1.222	1	1448600			41645	11297	27770	27783	47364	47364					0.05025854279756459
PLGVRGRGG	9	Unmodified	_PLGVRGRGG_					0	0	0		ENST00000257897.7_2_12:58119581-58120334:-|nuORF	ENST00000257897.7_2_12:58119581-58120334:-|nuORF	ENST00000257897.7_2_12:58119581-58120334:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.75958251953125	2	434.759218	867.503883	-1.1839	-0.00051471	1.8024	0.00078363	0.61853	0.00026891	434.7597390953803	87.854	3.3898	87.854	86.125	89.515	0					151	78	4	0	0	0	0.7932	1	8420	8420		25.45	3.7478	1	789230			41646	9362	27771	27784	47365	47365					0.06483159914296266
PLGVRGRGG	9	Unmodified	_PLGVRGRGG_					0	0	0		ENST00000257897.7_2_12:58119581-58120334:-|nuORF	ENST00000257897.7_2_12:58119581-58120334:-|nuORF	ENST00000257897.7_2_12:58119581-58120334:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.76007080078125	2	434.759218	867.503883	-0.16642	-7.2351E-05	0.12333	5.3619E-05	-0.043085	-1.8732E-05	434.75945112998903	87.697	3.829	87.765	85.858	89.687	0.067711					171	89	4	0	0	0	0.7932	1	8923	8923		26.796	0	1	1344400			41647	9362	27771	27784	47366	47366					0.06483159914296266
PLGVSLVY	8	Unmodified	_PLGVSLVY_					0	0	0		ENSG00000079432|ENST00000681038|CIC;nc|ENSG00000079432|Q96RK0-2|CIC	ENSG00000079432|ENST00000681038|CIC	ENSG00000079432|ENST00000681038|CIC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.2502136230469	2	424.249829	846.485105	-0.18354	-7.7867E-05	0.52567	0.00022301	0.34213	0.00014515	424.2501209493524	107.39	0.88235	107.36	106.9	107.79	-0.034401					76	20	5	0	0	0	0.83466	1	11659	11659		23.037	0	1	4879200			41648	1421	27772	27785	47367	47367					0.055721854998637355
PLGVSLVY	8	Unmodified	_PLGVSLVY_					0	0	0		ENSG00000079432|ENST00000681038|CIC;nc|ENSG00000079432|Q96RK0-2|CIC	ENSG00000079432|ENST00000681038|CIC	ENSG00000079432|ENST00000681038|CIC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.25079345703125	2	424.249829	846.485105	-1.8671	-0.00079214	2.2977	0.00097481	0.43057	0.00018267	424.250891156039	107.16	1.149	107.19	106.72	107.87	0.036125					99	27	5	0	0	0	0.87807	2	11432	11432;11470		31.579	1.7373	1	9677200			41649	1421	27772	27785	47368;47369	47368					0.055721854998637355
PLGVSLVY	8	Unmodified	_PLGVSLVY_					0	0	0		ENSG00000079432|ENST00000681038|CIC;nc|ENSG00000079432|Q96RK0-2|CIC	ENSG00000079432|ENST00000681038|CIC	ENSG00000079432|ENST00000681038|CIC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.25079345703125	2	424.249829	846.485105	2.211	0.00093801	-1.2738	-0.00054042	0.93718	0.0003976	424.249377193164	107.05	1.1854	107.15	106.72	107.9	0.10396					163	44	6	0	0	0	0.90024	1	13046	13046		39.021	1.993	1	22757000			41650	1421	27772	27785	47370	47370					0.055721854998637355
PLHLRKRR	8	Unmodified	_PLHLRKRR_					0	0	0			REV__ENST00000451080.5_1_2:202672326-202741280:+|nuORF	REV__ENST00000451080.5_1_2:202672326-202741280:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3267211914062	2	538.351609	1074.68866	-1.4901	-0.00080219	-2.722	-0.0014654	-4.2121	-0.0022676	538.3500913278755	100.88	0.20079	101.04	100.88	101.08	0.15504					9	4	3	0	0	0	0.4196	1	10500	10500		12.959	8.9739	1	412130	+		41651	26880	27773	27786	47371	47371					0.15430767784687305
PLHMDTLLI	9	Unmodified	_PLHMDTLLI_					0	0	0			REV__ENSG00000176148|ENST00000334274|TCP11L1	REV__ENSG00000176148|ENST00000334274|TCP11L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8048095703125	2	526.794078	1051.5736	1.0424	0.00054913	-2.832	-0.0014919	-1.7896	-0.00094274	526.7922495403742	16.607	0.40948	16.12	15.959	16.369	-0.48718					11	8	2	0	0	0	0.20789	1	152	152		25.45	0	1	82490	+		41652	22111	27774	27787	47372	47372					0.04987857748028546
PLHPPARAR	9	Unmodified	_PLHPPARAR_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2274475097656	2	507.801417	1013.58828	-0.1864	-9.4654E-05	-1.655	-0.00084043	-1.8414	-0.00093509	507.8004127536624	30.171	0.42832	30.156	29.939	30.367	-0.015167					13	9	2	0	0	0	0.20789	1	1543	1543		17.365	10.172	1	36757	+		41653	30102	27775	27788	47373	47373					0.08203110731028573
PLHPPARAR	9	Unmodified	_PLHPPARAR_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	507.801417	1013.58828	0.30799	0.0001564	-3.0704	-0.0015591	-2.7624	-0.0014027	507.7995953648902	30.164	0.27701	30.189	30.019	30.296	0.025013	0.016532	-0.0011232	NaN	17.365	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28205	+		41654	30102	27775	27788							0.08203110731028573
PLIAVPTT	8	Unmodified	_PLIAVPTT_					0	0	0		nc|ENSG00000285791|Q8IWW8-4|ADHFE1;nc|ENSG00000285791|Q8IWW8-3|ADHFE1;nc|ENSG00000285791|Q8IWW8-2|ADHFE1;ENSG00000147576|ENST00000396623|ADHFE1	nc|ENSG00000285791|Q8IWW8-4|ADHFE1	nc|ENSG00000285791|Q8IWW8-4|ADHFE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2486267089844	2	406.249829	810.485105	-0.18598	-7.5555E-05	-2.5531	-0.0010372	-2.7391	-0.0011128	406.2487203598378	111.64	0.79961	111.58	111.26	112.06	-0.059937					46	25	2	0	0	0	0.80963	1	12181	12181		15.636	0	1	69533			41655	4912	27776	27789	47374	47374					0.07228185499832307
PLIDPLAS	8	Unmodified	_PLIDPLAS_					0	0	0		ENSG00000111676|ENST00000396684|ATN1;ENST00000537488.1_1_12:7048306-7050940:+|nuORF	ENSG00000111676|ENST00000396684|ATN1	ENSG00000111676|ENST00000396684|ATN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.23736572265625	2	413.239461	824.46437	0.52355	0.00021635	-1.497	-0.00061862	-0.97345	-0.00040227	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.86791	1	7506	7506		28.254	0	1	1692300			41656	2600	27777	27790	47375	47375					0.045115951201864846
PLIEIISIN	9	Unmodified	_PLIEIISIN_					0	0	0		nc|ENSG00000145996|Q5VV42-2|CDKAL1;ENSG00000145996|ENST00000274695|CDKAL1	nc|ENSG00000145996|Q5VV42-2|CDKAL1	nc|ENSG00000145996|Q5VV42-2|CDKAL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3056335449219	2	506.307875	1010.6012	-0.49937	-0.00025284	2.5452	0.0012887	2.0458	0.0010358	506.30921071470516	49.299	2.411	49.324	47.87	50.281	0.025578					89	62	2	0	0	0	0.76764	1	3736	3736		34.173	3.6689	1	190740			41657	4810	27778	27791	47376	47376					0.09632084279905939
PLIGEKLL	8	Unmodified	_PLIGEKLL_					0	0	0		nc|ENSG00000117009|O15229-3|KMO;nc|ENSG00000117009|O15229-2|KMO;ENSG00000117009|ENST00000366559|KMO	nc|ENSG00000117009|O15229-3|KMO	nc|ENSG00000117009|O15229-3|KMO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7864990234375	2	441.786579	881.558604	-1.1834	-0.00052282	2.9635	0.0013093	1.7801	0.00078643	441.78771241232647	40.14	0.99562	40.729	39.913	40.908	0.58915					63	23	3	0	0	0	0.80963	1	3398	3398		15.636	0	1	2890500			41658	2961	27779	27792	47377	47377					0.11308733942325944
PLIGLLPE	8	Unmodified	_PLIGLLPE_					0	0	0		ENST00000393370.6_1_9:131873622-131873724:+|nuORF	ENST00000393370.6_1_9:131873622-131873724:+|nuORF	ENST00000393370.6_1_9:131873622-131873724:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.7747802734375	2	426.265479	850.516405	0.055287	2.3567E-05	3.4851	0.0014856	3.5404	0.0015091	426.266847426954	39.11	0.52862	39.08	38.628	39.157	-0.03027					22	11	3	0	0	0	0.4196	1	2683	2683		21.702	0	1	58562			41659	11043	27780	27793	47378	47378					0.08516758533949087
PLIGLLPE	8	Unmodified	_PLIGLLPE_					0	0	0		ENST00000393370.6_1_9:131873622-131873724:+|nuORF	ENST00000393370.6_1_9:131873622-131873724:+|nuORF	ENST00000393370.6_1_9:131873622-131873724:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	426.265479	850.516405	-1.9021	-0.00081078	6.3681	0.0027145	4.4661	0.0019037	426.2678696198213	38.709	0.51659	38.709	38.3	38.816	0	-0.17223	0.00076089	NaN	21.702	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75580			41660	11043	27780	27793							0.08516758533949087
PLIGLLPE	8	Unmodified	_PLIGLLPE_					0	0	0		ENST00000393370.6_1_9:131873622-131873724:+|nuORF	ENST00000393370.6_1_9:131873622-131873724:+|nuORF	ENST00000393370.6_1_9:131873622-131873724:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	426.265479	850.516405	-1.2386	-0.00052799	5.2566	0.0022407	4.018	0.0017127	426.2676223601211	38.806	0.48639	38.759	38.465	38.952	-0.047001	-0.12153	-0.00018673	NaN	21.702	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67014			41661	11043	27780	27793							0.08516758533949087
PLIGLLPE	8	Unmodified	_PLIGLLPE_					0	0	0		ENST00000393370.6_1_9:131873622-131873724:+|nuORF	ENST00000393370.6_1_9:131873622-131873724:+|nuORF	ENST00000393370.6_1_9:131873622-131873724:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	426.265479	850.516405	-1.793	-0.00076428	5.9749	0.0025469	4.1819	0.0017826	426.26801005877365	38.955	0.25265	38.965	38.757	39.01	0.010708	0.084483	0.00042561	NaN	21.702	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56493			41662	11043	27780	27793							0.08516758533949087
PLIGLLPE	8	Unmodified	_PLIGLLPE_					0	0	0		ENST00000393370.6_1_9:131873622-131873724:+|nuORF	ENST00000393370.6_1_9:131873622-131873724:+|nuORF	ENST00000393370.6_1_9:131873622-131873724:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	426.265479	850.516405	-0.27093	-0.00011549	5.4641	0.0023291	5.1931	0.0022137	426.267889278841	38.369	0.16074	38.891	38.75	38.911	0.52235	0.010208	-9.8613E-06	NaN	21.702	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98248			41663	11043	27780	27793							0.08516758533949087
PLIKAQLLLA	10	Unmodified	_PLIKAQLLLA_					0	0	0			REV__ENST00000360995.8_2_12:19615511-19615634:+|nuORF	REV__ENST00000360995.8_2_12:19615511-19615634:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.3615112304688	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.778	1	41.17	40.67	41.67	0.39209								0	0	0	0.45132	1	3514	3514		21.96	1.9631	1		+		41664	25490	27781	27794	47379	47379					0.17520929338957103
PLIKAQLLLA	10	Unmodified	_PLIKAQLLLA_					0	0	0			REV__ENST00000360995.8_2_12:19615511-19615634:+|nuORF	REV__ENST00000360995.8_2_12:19615511-19615634:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.36181640625	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.027	1	41.42	40.92	41.92	0.39209								0	0	0	0.45132	1	3556	3556		10.866	0	1		+		41665	25490	27781	27794	47380	47380					0.17520929338957103
PLIKLPRIA	9	Unmodified	_PLIKLPRIA_					0	0	0			REV__ENSG00000187021|ENST00000358834|PNLIPRP1	REV__ENSG00000187021|ENST00000358834|PNLIPRP1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.86053466796875	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.2	1	114.26	113.76	114.76	0.061073								0	0	0	0.36199	1	12215	12215		7.6903	3.0085	1		+		41666	22896	27782	27795	47381	47381					0.17648079887294443
PLIKRPVHY	9	Unmodified	_PLIKRPVHY_					0	0	0		ENST00000357385.7_1_17:79857297-79857938:+|nuORF	ENST00000357385.7_1_17:79857297-79857938:+|nuORF	ENST00000357385.7_1_17:79857297-79857938:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.84619140625	2	561.842751	1121.67095	1.1758	0.00066063	4.3438	0.0024405	5.5196	0.0031012	561.8450264684539	96.692	1.5682	97.097	96.665	98.233	0.40451					88	37	3	0	0	0	0.7932	1	11648	11648		25.45	1.2474	1	1298100			41667	10386	27783	27796	47382	47382					0.11498007739169225
PLILIECLN	9	Unmodified	_PLILIECLN_					0	0	0		ENST00000370708.8_2_6:56955660-56965533:+|nuORF	ENST00000370708.8_2_6:56955660-56965533:+|nuORF	ENST00000370708.8_2_6:56955660-56965533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.2982788085938	2	514.296453	1026.57835	-0.049414	-2.5414E-05	3.5563	0.001829	3.5069	0.0018036	514.2983333190766	96.625	2.0478	96.687	95.464	97.512	0.062225					95	47	3	0	0	0	0.7932	1	10164	10164		23.042	1.0826	1	523750			41668	10644	27784	27797	47383	47383					0.06612741890762663
PLILRHLA	8	Unmodified	_PLILRHLA_					0	0	0			REV__ENSG00000102763|ENST00000379310|VWA8	REV__ENSG00000102763|ENST00000379310|VWA8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.8064270019531	2	466.805637	931.596721	-0.42331	-0.0001976	1.7714	0.00082692	1.3481	0.00062932	466.80638372377126	31.219	1.3209	31.208	30.668	31.989	-0.010656					63	31	3	0	0	0	0.81724	1	1692	1692		14.664	0	1	69250	+		41669	17353	27785	27798	47384	47384					0.12818664647647893
PLILTSVAI	9	Unmodified	_PLILTSVAI_					0	0	0		ENSG00000081148|ENST00000193391|IMPG2	ENSG00000081148|ENST00000193391|IMPG2	ENSG00000081148|ENST00000193391|IMPG2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80084228515625	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	2996	2996		17.365	5.1581	1	890090			41670	1461	27786	27799	47385	47385					0.11905003113804469
PLIMPSKHLK	10	Unmodified	_PLIMPSKHLK_					0	0	0		ENST00000261425.7_2_4:39064576-39077703:+|nuORF	ENST00000261425.7_2_4:39064576-39077703:+|nuORF	ENST00000261425.7_2_4:39064576-39077703:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.35400390625	2	582.352094	1162.68964	-1.3468	-0.00078434	3.9839	0.00232	2.637	0.0015357	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.86718	1	12416	12416		27.882	2.3082	1	3937500			41671	9409	27787	27800	47386	47386					0.11479801318728278
PLIRFLPS	8	Unmodified	_PLIRFLPS_					0	0	0		ENST00000436893.1_1_X:38660859-38660934:-|nuORF	ENST00000436893.1_1_X:38660859-38660934:-|nuORF	ENST00000436893.1_1_X:38660859-38660934:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7900695800781	2	471.792195	941.569838	0.19858	9.3689E-05	-4.2901	-0.002024	-4.0915	-0.0019303	471.7899160853561	28.445	0.78111	28.272	27.979	28.76	-0.17336					28	19	2	0	0	0	0.93529	1	1733	1733		52.299	2.2746	1	183360			41672	11726	27788	27801	47387	47387					0.09671556036471429
PLISLTAELQT	11	Unmodified	_PLISLTAELQT_					0	0	0			REV__ENST00000454036.6_2_20:44673649-44676200:+|nuORF	REV__ENST00000454036.6_2_20:44673649-44676200:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.1578979492188	2	593.339904	1184.66525	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.938	1	28.05	27.55	28.55	0.11117								0	0	0	0.56276	1	1131	1131		27.047	2.5281	1		+		41673	26917	27789	27802	47388	47388					0.08030819646182863
PLITIDHLLL	10	Unmodified	_PLITIDHLLL_					0	0	0			REV__ENST00000354480.2_1_X:48435806-48435944:+|nuORF	REV__ENST00000354480.2_1_X:48435806-48435944:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3576049804688	2	574.357899	1146.70125	-1.3728	-0.00078849	-2.0963	-0.001204	-3.4692	-0.0019925	574.3566305310679	99.909	3.0439	100.08	98.131	101.18	0.17199					143	70	3	0	0	0	0.85939	1	10414	10414		23.042	2.0956	1	243780	+		41674	25357	27790	27803	47389	47389					0.13376321613714026
PLITTILT	8	Unmodified	_PLITTILT_					0	0	0			REV__ENSG00000159261|ENST00000399135|CLDN14	REV__ENSG00000159261|ENST00000399135|CLDN14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.1310729980469	2	436.278586	870.54262	0.25061	0.00010933	-3.8603	-0.0016842	-3.6097	-0.0015748	436.27696800075296	29.431	0.28529	29.462	29.296	29.581	0.030947					13	8	2	0	0	0	0.4196	1	1440	1440		13.775	0	1	14727	+		41675	20649	27791	27804	47390	47390					0.10217027705414239
PLIVVILQL	9	Unmodified	_PLIVVILQL_					0	0	0			REV__ENSG00000134698|ENST00000373210|AGO4	REV__ENSG00000134698|ENST00000373210|AGO4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3480224609375	2	504.346803	1006.67905	0.25279	0.00012749	2.2254	0.0011224	2.4782	0.0012499	504.3477701271758	36.647	1.9451	36.928	36.004	37.949	0.28173					113	47	4	0	0	0	0.7932	1	2879	2879		12.959	0	1	1998100	+		41676	19159	27792	27805	47391	47391					0.175981419359573
PLIYTTLLD	9	Unmodified	_PLIYTTLLD_					0	0	0			REV__ENST00000508198.5_1_4:152330372-152330417:+|nuORF	REV__ENST00000508198.5_1_4:152330372-152330417:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.82177734375	2	524.799883	1047.58521	2.1847	0.0011465	-2.8052	-0.0014722	-0.62058	-0.00032568	524.7984104619859	101.56	0.37468	101.82	101.69	102.07	0.26323					9	6	2	0	0	0	0.20789	1	12314	12314		31.955	0	1	154240	+		41677	27920	27793	27806	47392	47392					0.06332378042998243
PLKAGQFI	8	Unmodified	_PLKAGQFI_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26605224609375	2	437.263271	872.511988	1.7902	0.0007828	4.1025	0.0017939	5.8928	0.0025767	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.87276	1	788	788		29.842	1.5873	1	738160			41678	2924	27794	27807	47393	47393					0.07063294111037521
PLKAKLAKKKK	11	Unmodified	_PLKAKLAKKKK_					0	0	0		ENST00000509785.5_1_5:169014331-169015436:+|nuORF	ENST00000509785.5_1_5:169014331-169015436:+|nuORF	ENST00000509785.5_1_5:169014331-169015436:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.29736328125	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.682	1	76.077	75.577	76.577	0.39507								0	0	0	0.56276	1	8567	8567		8.7993	0.39205	1				41679	12996	27795	27808	47394	47394					0.25959946829675573
PLKAKLAKKKK	11	Unmodified	_PLKAKLAKKKK_					0	0	0		ENST00000509785.5_1_5:169014331-169015436:+|nuORF	ENST00000509785.5_1_5:169014331-169015436:+|nuORF	ENST00000509785.5_1_5:169014331-169015436:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2981872558594	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.984	1	77.384	76.884	77.884	0.39969								0	0	0	0.56276	1	8748	8748		8.7993	1.7806	1				41680	12996	27795	27808	47395	47395					0.25959946829675573
PLKAKLAKKKK	11	Unmodified	_PLKAKLAKKKK_					0	0	0		ENST00000509785.5_1_5:169014331-169015436:+|nuORF	ENST00000509785.5_1_5:169014331-169015436:+|nuORF	ENST00000509785.5_1_5:169014331-169015436:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2973327636719	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.063	1	77.463	76.963	77.963	0.39969								0	0	0	0.56276	1	8759	8759		9.2118	1.8121	1				41681	12996	27795	27808	47396	47396					0.25959946829675573
PLKAKLAKKKK	11	Unmodified	_PLKAKLAKKKK_					0	0	0		ENST00000509785.5_1_5:169014331-169015436:+|nuORF	ENST00000509785.5_1_5:169014331-169015436:+|nuORF	ENST00000509785.5_1_5:169014331-169015436:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2979431152344	3	418.299097	1251.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.718	1	77.286	76.786	77.786	0.56836								0	0	0	0.56276	1	8745	8745		6.001	0.58812	1				41682	12996	27795	27808	47397	47397					0.25959946829675573
PLKALAYV	8	Unmodified	_PLKALAYV_					0	0	0		ENSG00000128965|ENST00000617768|CHAC1	ENSG00000128965|ENST00000617768|CHAC1	ENSG00000128965|ENST00000617768|CHAC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.77099609375	2	437.773471	873.53239	-1.5883	-0.00069529	-3.2181	-0.0014088	-4.8063	-0.0021041	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.86791	1	2236	2236		28.254	0	1	1227500			41683	3569	27796	27809	47398	47398					0.09056464770833372
PLKALAYV	8	Unmodified	_PLKALAYV_					0	0	0		ENSG00000128965|ENST00000617768|CHAC1	ENSG00000128965|ENST00000617768|CHAC1	ENSG00000128965|ENST00000617768|CHAC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7716979980469	2	437.773471	873.53239	-1.5858	-0.00069423	-3.2177	-0.0014086	-4.8035	-0.0021029	437.77200270373476	39.973	1.5307	39.98	39.296	40.827	0.0065002					71	45	3	0	0	0	0.89457	1	2473	2473		37.028	0	1	3015800			41684	3569	27796	27809	47399	47399					0.09056464770833372
PLKALAYV	8	Unmodified	_PLKALAYV_					0	0	0		ENSG00000128965|ENST00000617768|CHAC1	ENSG00000128965|ENST00000617768|CHAC1	ENSG00000128965|ENST00000617768|CHAC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7712097167969	2	437.773471	873.53239	-0.99724	-0.00043656	-4.0891	-0.0017901	-5.0864	-0.0022267	437.77179407937126	38.831	0.76415	39.173	38.896	39.661	0.34187					66	17	5	0	0	0	0.83466	1	3217	3217		23.037	0	1	15326000			41685	3569	27796	27809	47400	47400					0.09056464770833372
PLKAVMSK	8	Unmodified	_PLKAVMSK_					0	0	0		ENST00000559169.1_1_15:101109445-101112292:-|nuORF;ENSG00000140471|ENST00000314742|LINS1	ENST00000559169.1_1_15:101109445-101112292:-|nuORF	ENST00000559169.1_1_15:101109445-101112292:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2666320800781	2	437.264956	872.515359	-0.37471	-0.00016385	2.1781	0.00095241	1.8034	0.00078857	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.79929	1	880	880		18.324	0.95945	1	970200			41686	4435	27797	27810	47401	47401					0.0740022089340755
PLKEPLFGQA	10	Unmodified	_PLKEPLFGQA_					0	0	0			REV__nc|ENSG00000134686|Q8IXK0-4|PHC2	REV__nc|ENSG00000134686|Q8IXK0-4|PHC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.3050537109375	2	550.310949	1098.60735	0.46363	0.00025514	-4.3107	-0.0023722	-3.8471	-0.0021171	550.3065010075525	57.842	1.1821	57.952	57.383	58.565	0.11027					82	57	2	0	0	0	0.86218	1	4906	4906		32.812	2.3088	1	234970	+		41687	19156	27798	27811	47402	47402					0.06198602511426543
PLKKCLTA	8	Unmodified	_PLKKCLTA_					0	0	0		ENST00000464326.1_1_9:19116415-19116484:-|nuORF	ENST00000464326.1_1_9:19116415-19116484:-|nuORF	ENST00000464326.1_1_9:19116415-19116484:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2648010253906	2	437.264956	872.515359	0.72217	0.00031578	1.2532	0.00054797	1.9754	0.00086375	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.80706	1	663	663		19.36	1.0356	1	944940			41688	12089	27799	27812	47403	47403					0.07400220893373444
PLKLDLLTY	9	Unmodified	_PLKLDLLTY_					0	0	0			REV__nc|ENSG00000141314|P58872-2|RHBDL3	REV__nc|ENSG00000141314|P58872-2|RHBDL3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267822265625	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.75	1	117.72	117.22	118.22	-0.02433								0	0	0	0.32159	1	13039	13039		23.042	1.0826	1		+		41689	19672	27800	27813	47404	47404					0.09816657313990618
PLKLISTT	8	Unmodified	_PLKLISTT_					0	0	0			REV__ENSG00000184564|ENST00000647374|SLITRK6	REV__ENSG00000184564|ENST00000647374|SLITRK6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.7748107910156	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.86288	1	9223	9223		26.796	6.3143	1	13819000	+		41690	22691	27801	27814	47405	47405					0.0969614356264401
PLKLISTT	8	Unmodified	_PLKLISTT_					0	0	0			REV__ENSG00000184564|ENST00000647374|SLITRK6	REV__ENSG00000184564|ENST00000647374|SLITRK6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7743835449219	2	436.776211	871.537869	-1.8179	-0.00079401	-1.324	-0.00057831	-3.1419	-0.0013723	436.77554812926275	90.686	2.546	90.866	90.262	92.808	0.18029					181	60	4	0	0	0	0.87922	1	9112	9112		31.955	12.595	1	8965000	+		41691	22691	27801	27814	47406	47406					0.0969614356264401
PLKLRPRALKV	11	Unmodified	_PLKLRPRALKV_					0	0	0			REV__ENSG00000142235|ENST00000600059|LMTK3	REV__ENSG00000142235|ENST00000600059|LMTK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.9610595703125	3	430.962597	1289.86596	0.0060132	2.5915E-06	-3.6893	-0.00159	-3.6833	-0.0015874	430.960790868088	38.105	0.87936	38.627	38.283	39.162	0.52236					94	21	5	0	0	0	0.78683	3	3119	3119;3129;3152		14.086	5.6788	1	2039100	+		41692	19733	27802	27815	47407;47408;47409	47407					0.23262178544155176
PLKLRPRALKV	11	Unmodified	_PLKLRPRALKV_					0	0	0			REV__ENSG00000142235|ENST00000600059|LMTK3	REV__ENSG00000142235|ENST00000600059|LMTK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.9599609375	3	430.962597	1289.86596	-0.99485	-0.00042874	-4.2081	-0.0018135	-5.2029	-0.0022423	430.96067868562477	39.832	1.6893	40.395	39.119	40.809	0.56301					124	39	4	0	0	0	0.79224	1	3394	3394		12.957	1.0251	1	1723300	+		41693	19733	27802	27815	47410	47410					0.23262178544155176
PLKPVTSQ	8	Unmodified	_PLKPVTSQ_					0	0	0			REV__nc|ENSG00000148840|Q5VV67-2|PPRC1	REV__nc|ENSG00000148840|Q5VV67-2|PPRC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.28643798828125	2	435.258185	868.501818	0.87181	0.00037946	-1.3965	-0.00060783	-0.52467	-0.00022837	435.257483929405	49.447	0.52597	50.292	50.115	50.641	0.84501					18	12	2	0	0	0	0.4196	1	4815	4815		18.324	0	1	536660	+		41694	29926	27803	27816	47411	47411					0.062306863857997996
PLKPVTSQ	8	Unmodified	_PLKPVTSQ_					0	0	0			REV__nc|ENSG00000148840|Q5VV67-2|PPRC1	REV__nc|ENSG00000148840|Q5VV67-2|PPRC1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	435.258185	868.501818	-0.16349	-7.1159E-05	-0.49303	-0.0002146	-0.65652	-0.00028575	435.2577690592748	49.664	0.65676	50.124	49.912	50.569	0.45983	-0.084229	0.00041031	NaN	17.365	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	554100	+		41695	29926	27803	27816							0.062306863857997996
PLKRGHRRDRR	11	Unmodified	_PLKRGHRRDRR_					0	0	0		nc|ENSG00000166402|P50607-2|TUB	nc|ENSG00000166402|P50607-2|TUB	nc|ENSG00000166402|P50607-2|TUB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	482.9615783691406	3	482.95902	1445.85523	-0.94939	-0.00045852	3.0832	0.0014891	2.1338	0.0010306	482.96036902440716	19.401	0.44094	19.326	19.105	19.546	-0.074974					29	14	3	0	0	0	0.76892	1	422	422		17.833	2.5	1	43004			41696	15071	27804	27817	47412	47412					0.15013588942429124
PLKRLLVPI	9	Unmodified	_PLKRLLVPI_					0	0	0		ENST00000577088.5_1_17:7487180-7490172:+|nuORF;nc|ENSG00000129255|O75352-2|MPDU1;ENSG00000129255|ENST00000250124|MPDU1;ENST00000572836.5_1_17:7487180-7490759:+|nuORF	ENST00000577088.5_1_17:7487180-7490172:+|nuORF	ENST00000577088.5_1_17:7487180-7490172:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8273315429688	2	524.865695	1047.71684	-1.534	-0.00080517	2.13	0.0011179	0.59593	0.00031278	524.8658776408146	99.033	0.20293	99.219	99.116	99.319	0.18582					5	4	2	0	0	0	0.20789	1	10231	10231		12.959	0	1	58106			41697	3580	27805	27818	47413	47413					0.19488652921404537
PLKRLLVPIL	10	Unmodified	_PLKRLLVPIL_					0	0	0		ENST00000577088.5_1_17:7487180-7490172:+|nuORF;nc|ENSG00000129255|O75352-2|MPDU1;ENSG00000129255|ENST00000250124|MPDU1;ENST00000572836.5_1_17:7487180-7490759:+|nuORF	ENST00000577088.5_1_17:7487180-7490172:+|nuORF	ENST00000577088.5_1_17:7487180-7490172:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.4044799804688	2	581.407727	1160.8009	0.27248	0.00015842	-3.6485	-0.0021212	-3.376	-0.0019628	581.40539803952	108.96	0.64938	108.99	108.59	109.24	0.034355					68	31	3	0	0	0	0.91594	1	11954	11954		6.7355	0.42289	1	3975600			41698	3580	27806	27819	47414	47414					0.2269318401831697
PLKRLRMPV	9	Unmodified	_PLKRLRMPV_					0	0	0			REV__nc|ENSG00000137693|P46937-3|YAP1	REV__nc|ENSG00000137693|P46937-3|YAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3535766601562	2	555.352428	1108.6903	0.85674	0.00047579	0.63766	0.00035412	1.4944	0.00082991	555.3526695275054	100.86	2.5278	101	100.46	102.99	0.14352					194	61	5	0	0	0	0.7932	1	10516	10516		24.203	1.1603	1	5097700	+		41699	29878	27807	27820	47415	47415					0.14030640758414847
PLKRTCIFKFL	11	Unmodified	_PLKRTCIFKFL_					0	0	0		ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.9413146972656	3	455.940693	1364.80025	-0.018225	-8.3094E-06	0.73758	0.00033629	0.71935	0.00032798	455.940966623884	20.554	1.3955	19.925	19.49	20.885	-0.6296					70	33	4	0	0	0	0.71803	1	705	705		28.577	6.0151	1	132260			41700	3152	27808	27821	47416	47416					0.1324402130692306
PLKSKMIY	8	Oxidation (M)	_PLKSKM(Oxidation (M))IY_		PLKSKM(1)IY		PLKSKM(48)IY	0	0	1		ENSG00000172757|ENST00000308162|CFL1;nc|ENSG00000165410|Q9Y281-3|CFL2;ENSG00000165410|ENST00000298159|CFL2;ENST00000530945.1_1_11:65623104-65623215:-|nuORF;nc|ENSG00000125868|P60981-2|DSTN;ENST00000602547.1_1_12:6994092-6994545:+|nuORF;ENSG00000125868|ENST00000246069|DSTN	ENSG00000172757|ENST00000308162|CFL1	ENSG00000172757|ENST00000308162|CFL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.28240966796875	2	498.283346	994.552139	-1.3647	-0.00068003	1.4268	0.00071096	0.062082	3.0934E-05	498.2839569241569	29.131	0.99621	29.102	28.822	29.818	-0.029207					40	22	3	0	0	0	0.92457	1	1822	1822		47.916	12.715	1	223790			41701	6791	27809	27822	47417	47417		117			0.05464472719290825
PLKSNKWTFT	10	Unmodified	_PLKSNKWTFT_					0	0	0			REV__ENSG00000070019|ENST00000261170|GUCY2C	REV__ENSG00000070019|ENST00000261170|GUCY2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.3436279296875	2	611.334956	1220.65536	0.28109	0.00017184	2.0062	0.0012265	2.2873	0.0013983	611.3357462896936	80.761	2.6609	81.288	79.593	82.254	0.52676					110	63	3	0	0	0	0.86802	1	9317	9317		21.96	12.254	1	1638900	+		41702	16593	27810	27823	47418	47418					0.05385676431455977
PLKTIVPG	8	Unmodified	_PLKTIVPG_					0	0	0			REV__ENST00000595288.5_1_19:7692923-7693151:-|nuORF	REV__ENST00000595288.5_1_19:7692923-7693151:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7670593261719	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.85277	1	2200	2200		25.45	1.2474	1	1649400	+		41703	29244	27811	27824	47419	47419					0.09792178253815109
PLKVKIYGN	9	Unmodified	_PLKVKIYGN_					0	0	0		ENST00000482646.5_1_10:35426742-35437470:+|nuORF	ENST00000482646.5_1_10:35426742-35437470:+|nuORF	ENST00000482646.5_1_10:35426742-35437470:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.312744140625	2	516.316035	1030.61752	-0.2553	-0.00013181	-3.2452	-0.0016755	-3.5005	-0.0018073	516.3144185010789	103.22	1.1465	103.4	103.01	104.15	0.18298					74	28	3	0	0	0	0.78536	1	10960	10960		29.15	6.1071	1	978380			41704	12491	27812	27825	47420	47420					0.10343210236646883
PLKVPLHGAVY	11	Unmodified	_PLKVPLHGAVY_					0	0	0			REV__nc|ENSG00000142784|Q8N5D0-4|WDTC1	REV__nc|ENSG00000142784|Q8N5D0-4|WDTC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.85595703125	2	597.355691	1192.69683	-0.84393	-0.00050413	1.3726	0.00081991	0.52864	0.00031578	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.75495	1	11131	11131		20.947	0.95016	1	1407500	+		41705	19754	27813	27826	47421	47421					0.10818857190793096
PLKVVINGLCR	11	Unmodified	_PLKVVINGLCR_					0	0	0			REV__nc|ENSG00000111058|Q9H6R3-2|ACSS3	REV__nc|ENSG00000111058|Q9H6R3-2|ACSS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.3699340820312	2	606.368275	1210.722	-1.2685	-0.00076921	3.3418	0.0020264	2.0733	0.0012572	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.7342	1	9480	9480		25.574	5.5773	1	823240	+		41706	17847	27814	27827	47422	47422					0.12506588721726075
PLLAATVLA	9	Unmodified	_PLLAATVLA_					0	0	0		ENSG00000154447|ENST00000284637|SH3RF1	ENSG00000154447|ENST00000284637|SH3RF1	ENSG00000154447|ENST00000284637|SH3RF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7799987792969	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.7932	1	3504	3504		25.45	3.7478	1	2364100			41707	5277	27815	27828	47423	47423					0.10388447425259528
PLLAATVLA	9	Unmodified	_PLLAATVLA_					0	0	0		ENSG00000154447|ENST00000284637|SH3RF1	ENSG00000154447|ENST00000284637|SH3RF1	ENSG00000154447|ENST00000284637|SH3RF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.780029296875	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.76402	1	2130	2130		35.201	8.4046	1	4737100			41708	5277	27815	27828	47424	47424					0.10388447425259528
PLLAATVLA	9	Unmodified	_PLLAATVLA_					0	0	0		ENSG00000154447|ENST00000284637|SH3RF1	ENSG00000154447|ENST00000284637|SH3RF1	ENSG00000154447|ENST00000284637|SH3RF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7782897949219	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.7932	1	1960	1960		25.45	6.0902	1	4750000			41709	5277	27815	27828	47425	47425					0.10388447425259528
PLLAATVLA	9	Unmodified	_PLLAATVLA_					0	0	0		ENSG00000154447|ENST00000284637|SH3RF1	ENSG00000154447|ENST00000284637|SH3RF1	ENSG00000154447|ENST00000284637|SH3RF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7797546386719	2	434.778754	867.542954	-0.29603	-0.00012871	3.1388	0.0013647	2.8428	0.001236	434.77998100939635	44.91	1.6932	44.842	44.077	45.77	-0.068634					139	41	4	0	0	0	0.76402	1	3248	3248		35.201	8.4046	1	1190800			41710	5277	27815	27828	47426	47426					0.10388447425259528
PLLALTWM	8	Unmodified	_PLLALTWM_					0	0	0		ENSG00000181790|ENST00000517894|ADGRB1;ENST00000518820.1_1_8:143599542-143620974:+|nuORF;nc|ENSG00000135298|O60242-2|ADGRB3;nc|ENSG00000121753|O60241-4|ADGRB2;nc|ENSG00000121753|O60241-2|ADGRB2;ENSG00000121753|ENST00000373658|ADGRB2;ENST00000530999.1_1_1:32193023-32200902:-|nuORF;nc|ENSG00000121753|O60241-3|ADGRB2;ENSG00000135298|ENST00000370598|ADGRB3;ENST00000465256.5_1_1:32193589-32201220:-|nuORF	ENSG00000181790|ENST00000517894|ADGRB1;nc|ENSG00000121753|O60241-4|ADGRB2;ENSG00000135298|ENST00000370598|ADGRB3;ENST00000465256.5_1_1:32193589-32201220:-|nuORF	nc|ENSG00000121753|O60241-4|ADGRB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7667236328125	2	472.767332	943.52011	0.45435	0.0002148	-0.98085	-0.00046371	-0.5265	-0.00024891	472.7668500235695	81.593	2.4119	81.53	80.267	82.679	-0.062935					139	57	4	0	0	0	0.86791	1	8246	8246		28.254	2.8041	1	232880			41711	3196;12106;7405;4001	27816	27829	47427	47427					0.04609105036138317
PLLAWLRN	8	Unmodified	_PLLAWLRN_					0	0	0		ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79656982421875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.445	1	59.478	58.978	59.978	0.032822								0	0	0	0.30125	1	5491	5491		20.482	1.1219	1				41712	8926	27817	27830	47428	47428					0.08446074267976655
PLLAWLRN	8	Unmodified	_PLLAWLRN_					0	0	0		ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957458496094	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.81548	2	3858	3687;3858		28.254	5.2118	1	1219600			41713	8926	27817	27830	47429;47430	47430					0.08446074267976655
PLLAWLRN	8	Unmodified	_PLLAWLRN_					0	0	0		ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7962341308594	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.82464	1	3540	3540		21.702	0	1	3201400			41714	8926	27817	27830	47431	47431					0.08446074267976655
PLLAWLRN	8	Unmodified	_PLLAWLRN_					0	0	0		ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79583740234375	2	491.795269	981.575986	-0.48962	-0.00024079	1.5802	0.00077716	1.0906	0.00053636	491.7959072795416	52.767	1.4912	53.191	52.596	54.087	0.42348					103	35	4	0	0	0	0.88915	1	5339	5339		35.201	6.9464	1	2146400			41715	8926	27817	27830	47432	47432					0.08446074267976655
PLLAWLRN	8	Unmodified	_PLLAWLRN_					0	0	0		ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7949523925781	2	491.795269	981.575986	-1.2395	-0.00060959	1.4172	0.00069695	0.17764	8.7362E-05	491.7958275421146	44.647	1.7443	45.492	44.612	46.357	0.84437					115	42	4	0	0	0	0.82464	1	4037	4037		21.702	1.2205	1	6753400			41716	8926	27817	27830	47433	47433					0.08446074267976655
PLLAWLRN	8	Unmodified	_PLLAWLRN_					0	0	0		ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7950439453125	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.29	1	54.874	54.374	55.374	0.58474								0	0	0	0.30928	1	5540	5540		46.766	4.292	1				41717	8926	27817	27830	47434	47434					0.08446074267976655
PLLCPGIRK	9	Unmodified	_PLLCPGIRK_					0	0	0			REV__ENST00000424094.6_1_20:57394223-57417237:-|nuORF	REV__ENST00000424094.6_1_20:57394223-57417237:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8038635253906	2	498.80478	995.595007	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.532	1	53.527	53.027	54.027	-0.0053711								0	0	0	0.30416	1	4684	4684		29.15	4.9468	1		+		41718	26515	27818	27831	47435	47435					0.09703287567390362
PLLCRHFY	8	Unmodified	_PLLCRHFY_					0	0	0		ENST00000524965.5_1_8:145540219-145541001:-|nuORF	ENST00000524965.5_1_8:145540219-145541001:-|nuORF	ENST00000524965.5_1_8:145540219-145541001:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.77490234375	2	524.77348	1047.53241	0.21194	0.00011122	1.7286	0.00090714	1.9406	0.0010184	524.7742507295208	46.759	0.71973	46.746	46.355	47.075	-0.013821					40	18	3	0	0	0	0.86791	1	3793	3793		28.254	0.17279	1	341750			41719	13228	27819	27832	47436	47436					0.010541414991848796
PLLDWPLAL	9	Unmodified	_PLLDWPLAL_					0	0	0			REV__ENST00000274787.2_1_5:175816530-175816593:+|nuORF	REV__ENST00000274787.2_1_5:175816530-175816593:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.2710571289062	2	519.305136	1036.59572	-0.024511	-1.2729E-05	2.305	0.001197	2.2805	0.0011843	519.3062904363013	75.007	0.33473	75.571	75.33	75.665	0.56458					10	7	2	0	0	0	0.20789	1	8476	8476		40.573	13.777	1	94243	+		41720	24566	27820	27833	47437	47437					0.07888405488074568
PLLDWPLAL	9	Unmodified	_PLLDWPLAL_					0	0	0			REV__ENST00000274787.2_1_5:175816530-175816593:+|nuORF	REV__ENST00000274787.2_1_5:175816530-175816593:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	519.305136	1036.59572	0.28737	0.00014923	3.0044	0.0015602	3.2918	0.0017094	519.3064263909197	75.207	0.25416	75.602	75.404	75.658	0.39507	0.015291	0.00045074	NaN	40.573	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67863	+		41721	24566	27820	27833							0.07888405488074568
PLLEELVTLRA	11	Unmodified	_PLLEELVTLRA_					0	0	0		ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3837890625	2	627.37682	1252.73909	6.5881	0.0041332	2.3069	0.0014473	8.8949	0.0055805	627.3780077284683	111.53	0.81311	111.58	110.9	111.71	0.04509					59	29	3	0	0	0	0.7342	1	13514	13514		25.574	1.0549	1	12238000			41722	5648;15041	27821	27834	47438	47438					0.12282787808521789
PLLEELVTLRA	11	Unmodified	_PLLEELVTLRA_					0	0	0		ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3847045898438	2	627.37682	1252.73909	6.5882	0.0041333	2.0403	0.00128	8.6285	0.0054133	627.3778538382699	111.82	0.62036	111.85	111.67	112.29	0.032707					64	21	4	0	0	0	0.73893	1	13589	13589		24.519	0	1	10130000			41723	5648;15041	27821	27834	47439	47439					0.12282787808521789
PLLEELVTLRA	11	Unmodified	_PLLEELVTLRA_					0	0	0		ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.389404296875	2	627.37682	1252.73909	6.5832	0.0041301	2.6289	0.0016493	9.2121	0.0057794	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.68378	3	13868	13826;13837;13868		34.173	6.2903	1	94412			41724	5648;15041	27821	27834	47440;47441;47442	47442					0.12282787808521789
PLLEELVTLRA	11	Unmodified	_PLLEELVTLRA_					0	0	0		ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.385498046875	2	627.37682	1252.73909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.58	1	116.54	116.04	117.04	-0.037872								0	0	0	0.56276	1	13976	13976		24.519	2.5593	1				41725	5648;15041	27821	27834	47443	47443					0.12282787808521789
PLLEELVTLRA	11	Unmodified	_PLLEELVTLRA_					0	0	0		ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	627.37682	1252.73909	0.9267	0.00058139	6.7848	0.0042566	7.7115	0.004838	627.3807713748283	113.88	0.10777	113.94	113.88	113.99	0.063232	-0.14708	0.00045084	NaN	34.173	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4098600			41726	5648;15041	27821	27834							0.12282787808521789
PLLEELVTLRA	11	Unmodified	_PLLEELVTLRA_					0	0	0		ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2;nc|ENSG00000161652|Q6UXV1-2|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	627.37682	1252.73909	2.3054	0.0014464	7.2583	0.0045537	9.5638	0.0060001	627.3810982304659	114.18	2.7905	114.19	113.17	115.96	0.0094528	0.10025	0.001045	NaN	34.173	372	132	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	441490			41727	5648;15041	27821	27834							0.12282787808521789
PLLFEDRRCV	10	Unmodified	_PLLFEDRRCV_					0	0	0			REV__ENSG00000185448|ENST00000346193|FAM47A;REV__ENSG00000198173|ENST00000358047|FAM47C	REV__ENSG00000185448|ENST00000346193|FAM47A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	624.3334350585938	2	624.33189	1246.64923	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.173	1	66.303	65.803	66.803	0.12996								0	0	0	0.45132	1	5861	5861		26.693	0.62953	1		+		41728	22766;23304	27822	27835	47444	47444					0.03576834928298922
PLLGRVGRTSR	11	Unmodified	_PLLGRVGRTSR_					0	0	0		nc|ENSG00000196408|Q8NFA2-4|NOXO1;ENSG00000196408|ENST00000356120|NOXO1;nc|ENSG00000196408|Q8NFA2-2|NOXO1;nc|ENSG00000196408|Q8NFA2|NOXO1	nc|ENSG00000196408|Q8NFA2-4|NOXO1	nc|ENSG00000196408|Q8NFA2-4|NOXO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.3698120117188	2	606.370195	1210.72584	-0.02762	-1.6748E-05	-1.0617	-0.00064376	-1.0893	-0.0006605	606.3694476526515	94.093	3.5324	94.139	93.078	96.61	0.045456					200	83	3	0	0	0	0.72739	1	9912	9912		27.047	8.7852	1	863170			41729	8050	27823	27836	47445	47445					0.12890394539772387
PLLHDIRKS	9	Unmodified	_PLLHDIRKS_					0	0	0		nc|ENSG00000290757|Q5NE16|CTSL3P	nc|ENSG00000290757|Q5NE16|CTSL3P	nc|ENSG00000290757|Q5NE16|CTSL3P	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.8236083984375	2	539.822015	1077.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.07	1	37.377	36.877	37.877	0.30742								0	0	0	0.30416	1	2951	2951		29.15	2.4566	1				41730	15342	27824	27837	47446	47446					0.09376826979860198
PLLIFEILQR	10	Unmodified	_PLLIFEILQR_					0	0	0		nc|ENSG00000005175|Q9H6T3-3|RPAP3;nc|ENSG00000005175|Q9H6T3-2|RPAP3;ENSG00000005175|ENST00000005386|RPAP3	nc|ENSG00000005175|Q9H6T3-3|RPAP3	nc|ENSG00000005175|Q9H6T3-3|RPAP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.3828735351562	2	621.384448	1240.75434	0.85949	0.00053407	-2.9966	-0.0018621	-2.1372	-0.001328	621.3825030626452	18.28	0.53683	17.658	17.447	17.983	-0.62141					28	11	4	0	0	0	0.47072	1	372	372		45.972	0	1	645220			41731	675	27825	27838	47447	47447					0.14359699396345604
PLLIISVAYAR	11	Unmodified	_PLLIISVAYAR_					0	0	0		nc|ENSG00000123901|Q9NYM4-2|GPR83;ENSG00000123901|ENST00000243673|GPR83	nc|ENSG00000123901|Q9NYM4-2|GPR83	nc|ENSG00000123901|Q9NYM4-2|GPR83	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2484130859375	3	405.920174	1214.73869	1.2974	0.00052664	4.2735	0.0017347	5.5709	0.0022613	406.2565159233649	89.939	0.26292	89.869	89.655	89.917	-0.069977					6	5	2	0	0	0	0.1767	1	9384	9384		9.2118	0	1	58538			41732	3293	27826	27839	47448	47448					0.13991412879317977
PLLILTLPSI	10	Unmodified	_PLLILTLPSI_					0	0	0			REV__chrX:51852354-51894269|30|22.13|0.31|6.18|+|0|TE_info:MLT1D,MLT1D_dup11558,ERVL-MaLR,LTR,donor,-,51851940,51852354|None,MAGED1|6	REV__chrX:51852354-51894269|30|22.13|0.31|6.18|+|0|TE_info:MLT1D,MLT1D_dup11558,ERVL-MaLR,LTR,donor,-,51851940,51852354|None,MAGED1|6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.35693359375	2	540.357368	1078.70018	0.33888	0.00018312	2.2349	0.0012076	2.5738	0.0013908	540.3583651603944	36.668	1.2319	36.608	36.237	37.469	-0.060333					76	35	3	0	0	0	0.8932	1	2083	2083		10.265	0	1	376760	+		41733	15952	27827	27840	47449	47449					0.16398107244822313
PLLIPTSK	8	Unmodified	_PLLIPTSK_					0	0	0		ENSG00000198899|ENST00000361899|MT-ATP6	ENSG00000198899|ENST00000361899|MT-ATP6	ENSG00000198899|ENST00000361899|MT-ATP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7797546386719	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.82658	1	3954	3954		21.96	4.5949	1	2468400			41734	8362	27828	27841	47450	47450					0.10388447425282266
PLLIPTSK	8	Unmodified	_PLLIPTSK_					0	0	0		ENSG00000198899|ENST00000361899|MT-ATP6	ENSG00000198899|ENST00000361899|MT-ATP6	ENSG00000198899|ENST00000361899|MT-ATP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77947998046875	2	434.778754	867.542954	1.0771	0.00046829	1.5251	0.00066307	2.6021	0.0011314	434.77937950289305	55.096	1.7211	55.123	54.502	56.224	0.027138					70	48	2	0	0	0	0.884	1	4915	4915		33.516	0	1	299790			41735	8362	27828	27841	47451	47451					0.10388447425282266
PLLIPTSK	8	Unmodified	_PLLIPTSK_					0	0	0		ENSG00000198899|ENST00000361899|MT-ATP6	ENSG00000198899|ENST00000361899|MT-ATP6	ENSG00000198899|ENST00000361899|MT-ATP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.779541015625	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.80308	1	3561	3561		16.473	2.6978	1	2750200			41736	8362	27828	27841	47452	47452					0.10388447425282266
PLLIPTSK	8	Unmodified	_PLLIPTSK_					0	0	0		ENSG00000198899|ENST00000361899|MT-ATP6	ENSG00000198899|ENST00000361899|MT-ATP6	ENSG00000198899|ENST00000361899|MT-ATP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.779052734375	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.85277	1	3579	3579		25.45	0	1	2175000			41737	8362	27828	27841	47453	47453					0.10388447425282266
PLLIVVHS	8	Unmodified	_PLLIVVHS_					0	0	0			REV__nc|ENSG00000175143|O43869|OR2T1	REV__nc|ENSG00000175143|O43869|OR2T1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	439.28485107421875	2	439.278921	876.543289	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.791	1	26.858	26.358	27.358	0.066877								0	0	0	0.29353	1	1036	1036		28.254	8.8943	1		+		41738	30047	27829	27842	47454	47454					0.10007867145134242
PLLKDVIA	8	Unmodified	_PLLKDVIA_					0	0	0		ENST00000485781.5_1_2:63816129-63824744:+|nuORF;ENSG00000014641|ENST00000233114|MDH1;nc|ENSG00000014641|P40925-3|MDH1	ENST00000485781.5_1_2:63816129-63824744:+|nuORF	ENST00000485781.5_1_2:63816129-63824744:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7798156738281	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.82464	1	3655	3655		21.702	0	1	1959200			41739	817	27830	27843	47455	47455					0.10388447425282266
PLLKDVIA	8	Unmodified	_PLLKDVIA_					0	0	0		ENST00000485781.5_1_2:63816129-63824744:+|nuORF;ENSG00000014641|ENST00000233114|MDH1;nc|ENSG00000014641|P40925-3|MDH1	ENST00000485781.5_1_2:63816129-63824744:+|nuORF	ENST00000485781.5_1_2:63816129-63824744:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7796325683594	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.82464	1	2694	2694		21.702	0	1	2793300			41740	817	27830	27843	47456	47456					0.10388447425282266
PLLKHIKKKA	10	Unmodified	_PLLKHIKKKA_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L;nc|ENSG00000147133|P21675-23|TAF1;nc|ENSG00000147133|P21675-24|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-1|TAF1;ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675-25|TAF1	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	588.4005126953125	2	588.402976	1174.7914	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.329	1	78.465	77.965	78.965	0.13667								0	0	0	0.45132	1	7387	7387		16.473	4.2663	1				41741	3243	27831	27844	47457	47457					0.210994157327832
PLLKLSLHTLH	11	Unmodified	_PLLKLSLHTLH_					0	0	0			REV__ENST00000462159.1_1_1:100573356-100598412:-|nuORF	REV__ENST00000462159.1_1_1:100573356-100598412:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	636.397705078125	2	636.395348	1270.77614	-0.01464	-9.3171E-06	2.9395	0.0018707	2.9248	0.0018614	636.3974001587258	101.99	0.74551	101.99	101.57	102.32	0					40	18	3	0	0	0	0.72739	1	10377	10377		27.047	0.3544	1	242290	+		41742	20513	27832	27845	47458	47458					0.1515850414493798
PLLLDKTYAAS	11	Unmodified	_PLLLDKTYAAS_					0	0	0			REV__nc|ENSG00000186205|Q5VT66-3|MTARC1	REV__nc|ENSG00000186205|Q5VT66-3|MTARC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.3333740234375	2	596.334621	1190.65469	0.85589	0.0005104	-3.7538	-0.0022385	-2.8979	-0.0017281	596.3322598839247	96.043	3.1049	96.206	95.311	98.416	0.16316					228	72	4	0	0	0	0.58425	1	9968	9968		45.972	9.5255	1	1469100	+		41743	22836	27833	27846	47459	47459					0.06698836991768076
PLLLLLAAR	9	Unmodified	_PLLLLLAAR_					0	0	0			REV__ENST00000478124.5_1_7:30634537-30662079:+|nuORF	REV__ENST00000478124.5_1_7:30634537-30662079:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	490.3352966308594	2	490.33677	978.658987	-0.70583	-0.00034609	-0.92387	-0.00045301	-1.6297	-0.0007991	490.3361563467807	65.561	0.40634	65.691	65.507	65.913	0.12995					36	20	2	0	0	0	0.7932	1	5821	5821		12.207	0	1	1004700	+		41744	17598	27834	27847	47460	47460					0.1688039099597063
PLLLLLSVLA	10	Unmodified	_PLLLLLSVLA_					0	0	0			REV__ENSG00000095587|ENST00000357947|TLL2	REV__ENSG00000095587|ENST00000357947|TLL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3610229492188	2	526.359911	1050.70527	-1.5676	-0.00082514	3.904	0.0020549	2.3364	0.0012298	526.3617973555264	35.031	1.6441	35.031	34.615	36.259	0					148	43	4	0	0	0	0.85694	1	1990	1990		21.96	3.6355	1	1307600	+		41745	17064	27835	27848	47461	47461					0.1819441110740172
PLLLLWGPL	9	Unmodified	_PLLLLWGPL_					0	0	0		ENST00000367204.5_1_1:204095788-204096322:+|nuORF	ENST00000367204.5_1_1:204095788-204096322:+|nuORF	ENST00000367204.5_1_1:204095788-204096322:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.32708740234375	2	511.325871	1020.63719	2.4721	0.001264	-0.088327	-4.5164E-05	2.3838	0.0012189	511.3257127043103	97.291	2.1515	97.235	96.802	98.953	-0.055542					136	49	4	0	0	0	0.7932	1	10516	10516		21.702	7.5652	1	1837000			41746	10541	27836	27849	47462	47462					0.12769586247418374
PLLLLWGPL	9	Unmodified	_PLLLLWGPL_					0	0	0		ENST00000367204.5_1_1:204095788-204096322:+|nuORF	ENST00000367204.5_1_1:204095788-204096322:+|nuORF	ENST00000367204.5_1_1:204095788-204096322:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.32781982421875	2	511.325871	1020.63719	1.5589	0.00079713	1.1279	0.00057671	2.6868	0.0013738	511.32632588248316	97.081	2.011	97.472	97.031	99.042	0.39065					108	48	3	0	0	0	0.7932	1	11709	11709		21.702	0	1	939020			41747	10541	27836	27849	47463	47463					0.12769586247418374
PLLLPLLPA	9	Unmodified	_PLLLPLLPA_					0	0	0			REV__ENSG00000163975|ENST00000296350|MELTF	REV__ENSG00000163975|ENST00000296350|MELTF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.82183837890625	2	473.820421	945.62629	0.090543	4.2901E-05	2.7417	0.0012991	2.8323	0.001342	473.82167197644884	37.75	0.81836	37.692	37.116	37.934	-0.057915					45	26	2	0	0	0	0.7932	1	2174	2174		21.702	7.0382	1	89536	+		41748	21006	27837	27850	47464	47464					0.1513018387313423
PLLLPLSTE	9	Unmodified	_PLLLPLSTE_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6;ENST00000471232.5_1_2:32750532-32815924:+|nuORF	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957458496094	2	491.794601	981.574648	0.42504	0.00020903	1.6887	0.00083051	2.1138	0.0010395	491.7954861357076	59.345	2.1315	59.459	58.989	61.12	0.11396					113	74	3	0	0	0	0.7932	1	5257	5257		24.203	2.5004	1	139720			41749	2871	27838	27851	47465	47465					0.08312395388566074
PLLLPMFL	8	Unmodified	_PLLLPMFL_					0	0	0		ENST00000415177.6_1_6:135318627-135323914:-|nuORF	ENST00000415177.6_1_6:135318627-135323914:-|nuORF	ENST00000415177.6_1_6:135318627-135323914:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28759765625	2	472.2879	942.561247	-0.91682	-0.000433	0.39397	0.00018607	-0.52285	-0.00024694	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.84567	1	10075	10075		24.504	0	1	50946000			41750	11375	27839	27852	47466	47466					0.0876686607564352
PLLLPTAS	8	Unmodified	_PLLLPTAS_					0	0	0		ENST00000535914.1_1_12:26278184-26278990:-|nuORF	ENST00000535914.1_1_12:26278184-26278990:-|nuORF	ENST00000535914.1_1_12:26278184-26278990:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24786376953125	2	406.249829	810.485105	-0.18684	-7.5904E-05	-2.4579	-0.00099852	-2.6447	-0.0010744	406.24872241647245	90.972	2.1991	91.041	90.513	92.712	0.069328					111	52	3	0	0	0	0.86288	1	9385	9385		26.796	0	1	1239900			41751	13432	27840	27853	47467	47467					0.07228185499843676
PLLLSAPGG	9	Unmodified	_PLLLSAPGG_					0	0	0		ENSG00000104976|ENST00000221573|SNAPC2	ENSG00000104976|ENST00000221573|SNAPC2	ENSG00000104976|ENST00000221573|SNAPC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7462463378906	2	412.747453	823.480354	-0.18726	-7.729E-05	-2.5941	-0.0010707	-2.7813	-0.001148	412.74629807731793	85.159	3.9764	85.226	83.424	87.4	0.067261					139	91	3	0	0	0	0.7932	1	8519	8519		26.796	0	1	1290300			41752	2177	27841	27854	47468	47468					0.06155301357091503
PLLLSLLPLT	10	Unmodified	_PLLLSLLPLT_					0	0	0			REV__nc|ENSG00000160961|Q96JL9-2|ZNF333	REV__nc|ENSG00000160961|Q96JL9-2|ZNF333	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.3574829101562	2	540.357368	1078.70018	-0.017297	-9.3466E-06	2.5708	0.0013891	2.5535	0.0013798	540.3585627881598	36.881	1.2861	36.905	36.409	37.695	0.023624					76	34	3	0	0	0	0.88945	1	2054	2054		10.866	0.6003	1	515190	+		41753	26041	27842	27855	47469	47469					0.16398107244799576
PLLLTLLSLL	10	Unmodified	_PLLLTLLSLL_					0	0	0		nc|ENSG00000223350|A0A0B4J1Y8|IGLV9-49	nc|ENSG00000223350|A0A0B4J1Y8|IGLV9-49	nc|ENSG00000223350|A0A0B4J1Y8|IGLV9-49	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3721313476562	2	548.373018	1094.73148	-0.26655	-0.00014617	2.6931	0.0014768	2.4265	0.0013306	548.374310727377	37.412	2.4822	37.359	36.203	38.685	-0.053558					161	55	4	0	0	0	0.88541	1	2666	2666		11.511	0	1	654980			41754	15261	27843	27856	47470	47470					0.18790680278902983
PLLLTVFSPRL	11	Unmodified	_PLLLTVFSPRL_					0	0	0		ENST00000577684.1_1_17:18314705-18315443:+|nuORF	ENST00000577684.1_1_17:18314705-18315443:+|nuORF	ENST00000577684.1_1_17:18314705-18315443:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2268981933594	3	419.263941	1254.76999	-1.4898	-0.00062461	-0.64862	-0.00027194	-2.1384	-0.00089655	419.26453849425513	76.741	0.15332	76.83	76.687	76.841	0.089363					6	4	2	0	0	0	0.17289	1	7160	7160		27.644	15.211	1	31286			41755	14069	27844	27857	47471	47471					0.1527998591341202
PLLLVIGTG	9	Unmodified	_PLLLVIGTG_					0	0	0		ENSG00000204913|ENST00000377924|LRRC3C	ENSG00000204913|ENST00000377924|LRRC3C	ENSG00000204913|ENST00000377924|LRRC3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7876281738281	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.7932	1	2913	2913		19.36	0	1	10128000			41756	8496	27845	27858	47472	47472					0.11308733942337312
PLLLVIGTG	9	Unmodified	_PLLLVIGTG_					0	0	0		ENSG00000204913|ENST00000377924|LRRC3C	ENSG00000204913|ENST00000377924|LRRC3C	ENSG00000204913|ENST00000377924|LRRC3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7877502441406	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.7932	1	2912	2912		24.203	1.1603	1	10215000			41757	8496	27845	27858	47473	47473					0.11308733942337312
PLLMNVLQKR	10	Unmodified	_PLLMNVLQKR_					0	0	0			REV__ENSG00000257743|ENST00000477922|MGAM2	REV__ENSG00000257743|ENST00000477922|MGAM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	606.3693237304688	2	606.368275	1210.722	-0.46368	-0.00028116	2.445	0.0014826	1.9813	0.0012014	606.3696540978959	94.435	3.8289	94.503	93.215	97.044	0.068336					198	90	3	0	0	0	0.85958	1	9775	9775		15.642	0.3087	1	750990	+		41758	23924	27846	27859	47474	47474					0.12506588721703338
PLLMQAWKL	9	Unmodified	_PLLMQAWKL_					0	0	0		nc|ENSG00000111275|P05091-2|ALDH2;ENST00000548536.1_1_12:112213467-112247376:+|nuORF;ENSG00000111275|ENST00000261733|ALDH2	nc|ENSG00000111275|P05091-2|ALDH2	nc|ENSG00000111275|P05091-2|ALDH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3143920898438	2	550.320263	1098.62597	0.59843	0.00032933	-1.5265	-0.00084005	-0.92804	-0.00051072	550.3194050714445	30.395	0.08667	30.393	30.346	30.433	-0.0022526					5	3	2	0	0	0	0.20789	1	1339	1339		24.203	0	1	51679			41759	2569	27847	27860	47475	47475					0.08060440881627073
PLLPALSVEL	10	Unmodified	_PLLPALSVEL_					0	0	0		ENST00000495397.1_1_1:161696362-161697449:+|nuORF	ENST00000495397.1_1_1:161696362-161697449:+|nuORF	ENST00000495397.1_1_1:161696362-161697449:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3267211914062	2	526.323525	1050.6325	-0.93594	-0.00049261	3.4491	0.0018153	2.5132	0.0013227	526.3251692142991	71.452	0.88377	71.528	70.921	71.805	0.076225					58	42	2	0	0	0	0.85939	1	6514	6514		23.042	0	1	116590			41760	12766	27848	27861	47476	47476					0.10920657313999982
PLLPDPIPE	9	Unmodified	_PLLPDPIPE_					0	0	0			REV__ENSG00000107036|ENST00000414202|RIC1	REV__ENSG00000107036|ENST00000414202|RIC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7925109863281	2	495.778951	989.543348	-0.22449	-0.0001113	-3.5544	-0.0017622	-3.7789	-0.0018735	495.77705754148116	26.546	0.42816	26.508	26.337	26.765	-0.038523					12	8	2	0	0	0	0.20789	1	1214	1214		17.365	2.7009	1	31481	+		41761	17642	27849	27862	47477	47477					0.0481582235447604
PLLPPSPE	8	Unmodified	_PLLPPSPE_					0	0	0			REV__ENST00000372524.4_1_10:77161139-77161271:-|nuORF	REV__ENST00000372524.4_1_10:77161139-77161271:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.30413818359375	2	425.239461	848.46437	0.82667	0.00035153	-3.54	-0.0015053	-2.7133	-0.0011538	425.23780974692727	22.931	0.28581	22.32	22.253	22.539	-0.6107					12	7	2	0	0	0	0.4196	1	1004	1004		13.775	3.5101	1	58523	+		41762	25722	27850	27863	47478	47478					0.03407595120188489
PLLQGWGLG	9	Unmodified	_PLLQGWGLG_					0	0	0			REV__ENST00000216085.11_2_22:29656419-29656560:-|nuORF	REV__ENST00000216085.11_2_22:29656419-29656560:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	471.2708740234375	2	470.766178	939.517802	-1.9239	-0.00090572	1.9879	0.00093583	0.06397	3.0115E-05	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.7932	1	1489	1489		26.796	0	1	93177	+		41763	24122	27851	27864	47479	47479					0.045623926227222
PLLQPKMR	8	Unmodified	_PLLQPKMR_					0	0	0		chr19:29812776-29812978|52|13.65|0.44|4.96|+|ENST00000575243|CCNE1,CCNE1;chr19:29821817-29822240|59|29.12|0.48|5.92|+|ENST00000576532|CCNE1,CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1;ENSG00000105173|ENST00000262643|CCNE1	chr19:29812776-29812978|52|13.65|0.44|4.96|+|ENST00000575243|CCNE1,CCNE1	chr19:29812776-29812978|52|13.65|0.44|4.96|+|ENST00000575243|CCNE1,CCNE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7963562011719	2	491.796955	981.579357	0.29464	0.0001449	-2.8698	-0.0014114	-2.5751	-0.0012664	491.7954245147593	45.248	1.2335	45.291	44.693	45.927	0.042599					75	30	3	0	0	0	0.79929	1	3300	3300		18.324	1.8513	1	440250			41764	271	27852	27865	47480	47480					0.08783001050346684
PLLQPRRL	8	Unmodified	_PLLQPRRL_					0	0	0			REV__ENSG00000122679|ENST00000242249|RAMP3	REV__ENSG00000122679|ENST00000242249|RAMP3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.7532043457031	2	496.821818	991.629084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.355	1	58.355	57.855	58.855	0								0	0	0	0.30252	1	5054	5054		19.36	1.0356	1		+		41765	18509	27853	27866	47481	47481					0.13293452050652377
PLLRDKVMLK	10	Unmodified	_PLLRDKVMLK_					0	0	0			REV__ENSG00000205978|ENST00000382554|NYNRIN	REV__ENSG00000205978|ENST00000382554|NYNRIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.92254638671875	3	404.921409	1211.7424	0.44862	0.00018165	3.224	0.0013055	3.6726	0.0014871	404.92260093832465	26.168	1.321	26.213	25.795	27.116	0.045507					105	39	4	0	0	0	0.85981	1	1112	1112		35.152	7.5081	1	304530	+		41766	23582	27854	27867	47482	47482					0.14499759381533295
PLLRIGFG	8	Unmodified	_PLLRIGFG_					0	0	0			REV__nc|ENSG00000178038|Q60I27-2|ALS2CL	REV__nc|ENSG00000178038|Q60I27-2|ALS2CL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.773681640625	2	436.771263	871.527973	1.7437	0.00076159	3.2678	0.0014273	5.0114	0.0021889	436.7728952540282	27.595	1.1661	27.572	27.227	28.393	-0.023556					56	27	3	0	0	0	0.86791	1	1269	1269		28.254	0	1	71535	+		41767	22249	27855	27868	47483	47483					0.0870700034794254
PLLRKKSNRT	10	Unmodified	_PLLRKKSNRT_					0	0	0			REV__nc|ENSG00000166073|Q14439-3|GPR176	REV__nc|ENSG00000166073|Q14439-3|GPR176	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.92303466796875	3	404.922689	1211.74624	0.44862	0.00018165	0.063043	2.5527E-05	0.51166	0.00020718	404.92260093832465	26.168	1.321	26.213	25.795	27.116	0.045507					105	39	4	0	0	0	0.85259	1	1101	1101		20.03	0	1	304530	+		41768	30002	27856	27869	47484	47484					0.14883565199579607
PLLRPLASVSA	11	Unmodified	_PLLRPLASVSA_					0	0	0		ENSG00000082996|ENST00000392894|RNF13;ENST00000493238.1_1_3:149677832-149678888:+|nuORF;nc|ENSG00000082996|O43567-2|RNF13	ENSG00000082996|ENST00000392894|RNF13	ENSG00000082996|ENST00000392894|RNF13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.3438720703125	2	562.345323	1122.67609	1.4163	0.00079647	-4.4036	-0.0024763	-2.9872	-0.0016799	562.3426954629917	90.573	4.6587	90.62	89.222	93.881	0.046448					198	110	3	0	0	0	0.75164	1	9375	9375		21.686	4.3208	1	624150			41769	1493	27857	27870	47485	47485					0.11966266811123205
PLLRRVTTTR	10	Unmodified	_PLLRRVTTTR_					0	0	0			REV__nc|ENSG00000125630|Q9H9Y6-4|POLR1B	REV__nc|ENSG00000125630|Q9H9Y6-4|POLR1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.922607421875	3	404.922689	1211.74624	2.788	0.0011289	-2.2292	-0.00090265	0.5588	0.00022627	404.92169157251993	26.492	2.181	26.459	26.021	28.202	-0.032125					96	52	4	0	0	0	0.86338	1	1148	1148		31.634	7.4025	1	297020	+		41770	18651	27858	27871	47486	47486					0.14883565199579607
PLLRSRQHL	9	Unmodified	_PLLRSRQHL_					0	0	0			REV__ENST00000248633.8_1_7:92151491-92157780:-|nuORF	REV__ENST00000248633.8_1_7:92151491-92157780:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3373413085938	2	560.340907	1118.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.13	1	106.17	105.67	106.67	0.03688								0	0	0	0.30778	1	11613	11613		27.882	1.1893	1		+		41771	24271	27859	27872	47487	47487					0.11267337965318802
PLLSALEGCL	10	Unmodified	_PLLSALEGCL_					0	0	0			REV__ENST00000483664.5_2_7:150107312-150107609:+|nuORF	REV__ENST00000483664.5_2_7:150107312-150107609:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.2799377441406	2	508.27826	1014.54197	-0.39653	-0.00020155	4.0689	0.0020681	3.6724	0.0018666	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.71042	1	8712	8712		44.117	5.3107	1	2080300	+		41772	27497	27860	27873	47488	47488					0.03527864994055108
PLLSEVAL	8	Unmodified	_PLLSEVAL_					0	0	0			REV__ENST00000325658.3_1_14:60717110-60717179:+|nuORF	REV__ENST00000325658.3_1_14:60717110-60717179:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.2538757324219	2	421.255111	840.49567	0.58556	0.00024667	-3.0592	-0.0012887	-2.4737	-0.001042	421.25366472055117	84.161	1.6821	84.309	83.832	85.514	0.14794					87	38	3	0	0	0	0.82464	1	8202	8202		21.702	0	1	609670	+		41773	25064	27861	27874	47489	47489					0.06904168154278523
PLLSFLLPPL	10	Unmodified	_PLLSFLLPPL_					0	0	0		ENST00000307271.3_1_7:150147778-150147952:+|nuORF	ENST00000307271.3_1_7:150147778-150147952:+|nuORF	ENST00000307271.3_1_7:150147778-150147952:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.3539428710938	2	555.352086	1108.68962	-0.86356	-0.00047958	3.0122	0.0016728	2.1487	0.0011933	555.3536421650435	101.16	2.3681	101.19	100.7	103.07	0.031036					166	56	5	0	0	0	0.67608	1	10746	10746		45.952	1.8352	1	6361400			41774	9871	27862	27875	47490	47490					0.13962124590375424
PLLSGLLY	8	Unmodified	_PLLSGLLY_					0	0	0		ENST00000470377.1_1_1:33256708-33272178:-|nuORF;ENST00000481895.5_1_1:33256818-33282875:-|nuORF;ENSG00000134684|ENST00000373477|YARS1	ENST00000470377.1_1_1:33256708-33272178:-|nuORF	ENST00000470377.1_1_1:33256708-33272178:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.261962890625	2	438.265479	874.516405	-1.2142	-0.00053214	-3.9242	-0.0017198	-5.1384	-0.002252	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.82464	1	3491	3491		21.702	2.3424	1	4828000			41775	3951	27863	27876	47491	47491					0.07412758533951092
PLLSPTSR	8	Unmodified	_PLLSPTSR_					0	0	0		ENST00000569969.5_2_16:28986191-28992937:+|nuORF	ENST00000569969.5_2_16:28986191-28992937:+|nuORF	ENST00000569969.5_2_16:28986191-28992937:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2998046875	2	435.75581	869.497067	-1.0201	-0.00044453	-0.22683	-9.8845E-05	-1.247	-0.00054337	435.75559425472676	73.312	1.1182	73.699	73.084	74.202	0.38779					48	29	2	0	0	0	0.4196	1	8196	8196		30.504	0	1	960500			41776	13989	27864	27877	47492	47492					0.0570980224304094
PLLSTPLILL	10	Unmodified	_PLLSTPLILL_					0	0	0		ENST00000372242.7_1_1:45101698-45101950:-|nuORF	ENST00000372242.7_1_1:45101698-45101950:-|nuORF	ENST00000372242.7_1_1:45101698-45101950:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.3584594726562	2	540.357368	1078.70018	-0.068166	-3.6834E-05	2.3888	0.0012908	2.3206	0.001254	540.3584971364328	36.917	1.6881	36.864	36.337	38.025	-0.053558					103	37	4	0	0	0	0.8488	2	2522	2455;2522		17.365	0.89182	1	646150			41777	10693	27865	27878	47493;47494	47494					0.16398107244822313
PLLSTPLILL	10	Unmodified	_PLLSTPLILL_					0	0	0		ENST00000372242.7_1_1:45101698-45101950:-|nuORF	ENST00000372242.7_1_1:45101698-45101950:-|nuORF	ENST00000372242.7_1_1:45101698-45101950:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3591918945312	2	540.357368	1078.70018	-0.87065	-0.00047046	3.4074	0.0018412	2.5367	0.0013707	540.3590107608643	36.885	1.6	36.896	36.391	37.991	0.011173					96	35	4	0	0	0	0.85939	1	2407	2407		23.042	0	1	594400			41778	10693	27865	27878	47495	47495					0.16398107244822313
PLLTELCIQHI	11	Unmodified	_PLLTELCIQHI_					0	0	0		ENSG00000146221|ENST00000371505|TCTE1	ENSG00000146221|ENST00000371505|TCTE1	ENSG00000146221|ENST00000371505|TCTE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.35888671875	2	640.357573	1278.70059	2.419	0.001549	-0.44244	-0.00028332	1.9765	0.0012657	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.69995	1	10811	10811		31.53	0	1	625580			41779	4826	27866	27879	47496	47496					0.07239158902348208
PLLTILGSI	9	Unmodified	_PLLTILGSI_					0	0	0			REV__nc|ENSG00000115687|Q96RG2-4|PASK	REV__nc|ENSG00000115687|Q96RG2-4|PASK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8003845214844	2	463.799686	925.584819	-0.080206	-3.7199E-05	1.9522	0.00090541	1.8719	0.00086821	463.80040731335265	41.41	1.3196	41.365	40.954	42.273	-0.045467					80	38	3	0	0	0	0.7932	1	2740	2740		18.324	0	1	417210	+		41780	18144	27867	27880	47497	47497					0.11905003113804469
PLLTKKQFAY	10	Unmodified	_PLLTKKQFAY_					0	0	0			REV__ENST00000054666.10_1_1:7839979-7840126:+|nuORF	REV__ENST00000054666.10_1_1:7839979-7840126:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5745849609375	3	403.572775	1207.69649	0.57405	0.00023167	4.2788	0.0017268	4.8529	0.0019585	403.57443061209773	82.843	3.1803	82.99	82.289	85.469	0.14694					168	73	3	0	0	0	0.85981	1	8035	8035		35.152	3.5178	1	1495300	+		41781	24069	27868	27881	47498	47498					0.10095437470931756
PLLTKKQFAY	10	Unmodified	_PLLTKKQFAY_					0	0	0			REV__ENST00000054666.10_1_1:7839979-7840126:+|nuORF	REV__ENST00000054666.10_1_1:7839979-7840126:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5749206542969	3	403.572775	1207.69649	0.82597	0.00033334	3.7128	0.0014984	4.5388	0.0018317	403.5742849619775	82.098	2.6206	82.524	81.753	84.373	0.42646					188	63	3	0	0	0	0.78666	1	9511	9511		40.058	3.7405	1	14382000	+		41782	24069	27868	27881	47499	47499					0.10095437470931756
PLLTLKEL	8	Unmodified	_PLLTLKEL_					0	0	0			REV__ENST00000593832.1_1_19:17691254-17691482:+|nuORF	REV__ENST00000593832.1_1_19:17691254-17691482:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.80029296875	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.79929	1	3675	3675		18.324	0	1	269820	+		41783	29232	27869	27882	47500	47500					0.11905003113804469
PLLTLSLIG	9	Unmodified	_PLLTLSLIG_					0	0	0			REV__ENST00000545712.6_1_12:109994590-109994683:-|nuORF	REV__ENST00000545712.6_1_12:109994590-109994683:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8000183105469	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	1	3419	3419		16.473	0	1	1294000	+		41784	28529	27870	27883	47501	47501					0.11905003113815837
PLLTMCAM	8	Carbamidomethyl (C),2 Oxidation (M)	_PLLTM(Oxidation (M))C(Carbamidomethyl (C))AM(Oxidation (M))_	PLLTMC(1)AM	PLLTM(1)CAM(1)	PLLTMC(49)AM	PLLTM(49)CAM(49)	0	1	2			REV__nc|ENSG00000167608|Q7Z404-1|TMC4	REV__nc|ENSG00000167608|Q7Z404-1|TMC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7179870605469	2	484.716124	967.417695	1.6832	0.00081588	1.9486	0.00094453	3.6318	0.0017604	484.7172727178253	99.415	0.71875	99.747	99.379	100.1	0.33295					61	17	4	0	0	0	0.92774	2	11963	11963;12034		49.211	10.405	1	4527000	+		41785	21403	27871	27884	47502;47503	47502	263	319;320			-0.06731672089279073
PLLTVILALV	10	Unmodified	_PLLTVILALV_					0	0	0		nc|ENSG00000182087|Q4ZIN3-2|TMEM259;ENSG00000182087|ENST00000356663|TMEM259	nc|ENSG00000182087|Q4ZIN3-2|TMEM259	nc|ENSG00000182087|Q4ZIN3-2|TMEM259	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3587646484375	2	526.359911	1050.70527	0.23622	0.00012434	2.2547	0.0011868	2.4909	0.0013111	526.3609415708197	35.175	1.5308	35.281	34.617	36.148	0.10604					147	55	3	0	0	0	0.85939	1	1894	1894		23.042	5.6775	1	1065400			41786	7420	27872	27885	47504	47504					0.18194411107378983
PLLTVILALV	10	Unmodified	_PLLTVILALV_					0	0	0		nc|ENSG00000182087|Q4ZIN3-2|TMEM259;ENSG00000182087|ENST00000356663|TMEM259	nc|ENSG00000182087|Q4ZIN3-2|TMEM259	nc|ENSG00000182087|Q4ZIN3-2|TMEM259	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.361328125	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.8488	1	1870	1870		17.365	5.1581	1	1221500			41787	7420	27872	27885	47505	47505					0.18194411107378983
PLLTVPKG	8	Unmodified	_PLLTVPKG_					0	0	0		ENSG00000167548|ENST00000301067|KMT2D;nc|ENSG00000167548|O14686-3|KMT2D	ENSG00000167548|ENST00000301067|KMT2D	ENSG00000167548|ENST00000301067|KMT2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76708984375	2	412.765646	823.516739	-0.52852	-0.00021815	2.9286	0.0012088	2.4001	0.00099068	412.76723094642836	48.755	3.2946	48.662	47.534	50.828	-0.093178					192	86	3	0	0	0	0.79929	1	3783	3783		18.324	3.6603	1	594400			41788	6301	27873	27886	47506	47506					0.0979217825380374
PLLVAKAR	8	Unmodified	_PLLVAKAR_					0	0	0		ENST00000548804.5_1_12:57998523-57998613:+|nuORF	ENST00000548804.5_1_12:57998523-57998613:+|nuORF	ENST00000548804.5_1_12:57998523-57998613:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.2923583984375	2	434.292362	866.570172	-0.16844	-7.3153E-05	0.35174	0.00015276	0.1833	7.9605E-05	434.2923797730273	74.311	0.86466	74.354	73.988	74.852	0.042908					61	35	2	0	0	0	0.82464	1	7117	7117		21.702	0	1	657810			41789	13624	27874	27887	47507	47507					0.13154975756310705
PLLVFLTVF	9	Unmodified	_PLLVFLTVF_					0	0	0		ENST00000309982.9_2_8:104241101-104241194:+|nuORF	ENST00000309982.9_2_8:104241101-104241194:+|nuORF	ENST00000309982.9_2_8:104241101-104241194:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8270874023438	2	524.825704	1047.63685	1.241	0.00065132	1.7862	0.00093744	3.0272	0.0015888	524.8265446316465	102.17	1.0632	102.22	101.85	102.91	0.04319					53	25	3	0	0	0	0.7932	1	11021	11021		20.482	1.1219	1	396530			41790	9903	27875	27888	47508	47508					0.1149416652756372
PLLVHAPPSA	10	Unmodified	_PLLVHAPPSA_					0	0	0			REV__ENSG00000066056|ENST00000372476|TIE1	REV__ENSG00000066056|ENST00000372476|TIE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904052734375	2	501.292559	1000.57057	-0.36653	-0.00018374	-3.8537	-0.0019318	-4.2202	-0.0021156	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.81018	2	9176	9176;9261		38.806	1.3541	1	9903700	+		41791	16515	27876	27889	47509;47510	47509					0.07030350685511166
PLLVRPYLPYI	11	Unmodified	_PLLVRPYLPYI_					0	0	0		nc|ENSG00000197506|Q9HAS3-2|SLC28A3;ENSG00000197506|ENST00000376238|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.6100769042969	3	448.607708	1342.80129	0.6314	0.00028325	2.7323	0.0012257	3.3637	0.001509	448.60887470875934	77.01	0.99304	77.058	76.682	77.675	0.047981					82	45	2	0	0	0	0.75906	1	7562	7562		20.03	2.8637	1	702210			41792	8171	27877	27890	47511	47511					0.14360558947510071
PLLWALILL	9	Unmodified	_PLLWALILL_					0	0	0		chr2:67290077-67295868|15|25.2|0.0|12.46|+|0|TE_info:THE1C,THE1C_dup967,ERVL-MaLR,LTR,donor,+,67289809,67290077|None,LINC01828|3	chr2:67290077-67295868|15|25.2|0.0|12.46|+|0|TE_info:THE1C,THE1C_dup967,ERVL-MaLR,LTR,donor,+,67289809,67290077|None,LINC01828|3	chr2:67290077-67295868|15|25.2|0.0|12.46|+|0|TE_info:THE1C,THE1C_dup967,ERVL-MaLR,LTR,donor,+,67289809,67290077|None,LINC01828|3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7799682617188	2	526.349346	1050.68414	-0.40927	-0.00021542	-3.7861	-0.0019928	-4.1953	-0.0022082	526.3472807968683	59.77	0.72034	60.324	59.998	60.718	0.55323					25	18	2	0	0	0	0.20789	1	6369	6369		29.842	3.0454	1	424140			41793	343	27878	27891	47512	47512					0.1608244579856546
PLLWHGLPRQP	11	Unmodified	_PLLWHGLPRQP_					0	0	0			REV__ENST00000532338.5_1_8:145533646-145534000:+|nuORF	REV__ENST00000532338.5_1_8:145533646-145534000:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.58544921875	3	438.587418	1312.74043	0.076565	3.3581E-05	-4.1377	-0.0018147	-4.0611	-0.0017812	438.5856740395665	31.935	0.78642	31.946	31.626	32.413	0.0109					48	21	3	0	0	0	0.6493	1	1749	1749		38.754	3.5754	1	365660	+		41794	28323	27879	27892	47513	47513					0.09656466687920329
PLLWHSID	8	Unmodified	_PLLWHSID_					0	0	0		ENST00000561529.1_1_16:71599967-71606118:+|nuORF	ENST00000561529.1_1_16:71599967-71606118:+|nuORF	ENST00000561529.1_1_16:71599967-71606118:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.7057800292969	2	490.763635	979.512717	-0.22707	-0.00011144	-3.3748	-0.0016562	-3.6018	-0.0017676	490.7618440017023	28.038	0.36891	27.999	27.795	28.164	-0.038523					11	7	2	0	0	0	0.4196	1	1395	1395		46.766	20.074	1	37083			41795	13837	27880	27893	47514	47514					0.022140887600926362
PLLWQLGR	8	Unmodified	_PLLWQLGR_					0	0	0		ENST00000072869.8_1_7:140394627-140394756:+|nuORF	ENST00000072869.8_1_7:140394627-140394756:+|nuORF	ENST00000072869.8_1_7:140394627-140394756:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79486083984375	2	491.795269	981.575986	-0.035071	-1.7248E-05	1.1757	0.00057819	1.1406	0.00056094	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.86288	1	4835	4835		26.796	1.3459	1	1625300			41796	9074	27881	27894	47515	47515					0.08446074267999393
PLLYHTLLY	9	Unmodified	_PLLYHTLLY_					0	0	0			REV__ENSG00000172992|ENST00000651974|DCAKD	REV__ENSG00000172992|ENST00000651974|DCAKD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.8053588867188	2	566.823692	1131.63283	0.7076	0.00040108	-4.4454	-0.0025198	-3.7378	-0.0021187	566.8211528814409	75.248	1.766	75.813	75.33	77.096	0.56458					124	44	5	0	0	0	0.20789	1	8470	8470		68.485	0	1	7205900	+		41797	21877	27882	27895	47516	47516					0.0722807703386934
PLNIWKTTV	9	Unmodified	_PLNIWKTTV_					0	0	0			REV__ENST00000550286.5_1_12:53708901-53718372:-|nuORF	REV__ENST00000550286.5_1_12:53708901-53718372:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.3107299804688	2	536.313492	1070.61243	0.035418	1.8995E-05	-3.9528	-0.0021199	-3.9174	-0.0021009	536.3115374400554	98.142	1.5616	98.37	97.408	98.969	0.22787					73	35	3	0	0	0	0.76764	1	10171	10171		34.173	2.5383	1	360500	+		41798	28597	27883	27896	47517	47517					0.07994906374028687
PLNKGVIA	8	Unmodified	_PLNKGVIA_					0	0	0			REV__ENST00000509220.1_1_4:47462124-47465668:-|nuORF	REV__ENST00000509220.1_1_4:47462124-47465668:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2578430175781	2	406.255446	810.496338	0.4356	0.00017696	3.2885	0.001336	3.7241	0.001513	406.2566834983236	67.315	1.2036	67.443	67.189	68.392	0.12748					81	45	2	0	0	0	0.81548	1	6017	6017		20.482	5.8177	1	112860	+		41799	21541	27884	27897	47518	47518					0.08351007593989834
PLNKHLFK	8	Unmodified	_PLNKHLFK_					0	0	0		nc|ENSG00000036549|Q8IYH5-3|ZZZ3;nc|ENSG00000036549|Q8IYH5-2|ZZZ3;ENSG00000036549|ENST00000370801|ZZZ3	nc|ENSG00000036549|Q8IYH5-3|ZZZ3	nc|ENSG00000036549|Q8IYH5-3|ZZZ3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.80487060546875	2	498.803094	995.591636	-0.601	-0.00029978	1.7229	0.00085937	1.1219	0.00055959	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.85277	1	4725	4725		25.45	0	1	2240900			41800	903	27885	27898	47519	47519					0.09366360785031702
PLNLTLIASKK	11	Unmodified	_PLNLTLIASKK_					0	0	0		nc|ENSG00000133863|Q9BXT5|TEX15;ENSG00000133863|ENST00000643185|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3809204101562	2	599.381906	1196.74926	-1.2913	-0.00077396	-1.7358	-0.0010404	-3.0271	-0.0018144	599.3806932084216	103.36	2.8938	103.47	103.07	105.96	0.11494					245	72	6	0	0	0	0.74763	1	10901	10901		22.58	2.5829	1	20299000			41801	3897	27886	27899	47520	47520					0.15875395533748815
PLNNSGGFE	9	Unmodified	_PLNNSGGFE_					0	0	0		ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.7145690917969	2	467.716882	933.41921	-1.0273	-0.00048048	-1.8687	-0.00087402	-2.896	-0.0013545	467.71588340650413	72.084	0.79173	72.215	71.826	72.618	0.13146					44	28	3	0	0	0	0.77244	1	6581	6581		32.812	13.452	1	138750			41802	3681	27887	27900	47521	47521					-0.050162554129883574
PLNPIKQDVKK	11	Unmodified	_PLNPIKQDVKK_					0	0	0		ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.8954467773438	2	640.390262	1278.76597	0.51397	0.00032914	3.5187	0.0022534	4.0327	0.0025825	640.3923882876153	53.544	0.83096	53.626	53.252	54.083	0.081524					35	21	2	0	0	0	0.75164	1	4408	4408		21.686	3.4237	1	183090			41803	7350	27888	27901	47522	47522					0.13773896419684206
PLNPKPHK	8	Unmodified	_PLNPKPHK_					0	0	0		ENSG00000173275|ENST00000339249|ZNF449	ENSG00000173275|ENST00000339249|ZNF449	ENSG00000173275|ENST00000339249|ZNF449	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7774963378906	2	465.779619	929.544686	-0.69238	-0.0003225	-3.5487	-0.0016529	-4.2411	-0.0019754	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.88915	1	9392	9392		35.201	4.6971	1	927810			41804	6848	27889	27902	47523	47523					0.07709501233898663
PLNRALSLH	9	Unmodified	_PLNRALSLH_					0	0	0			REV__ENSG00000168811|ENST00000699704|IL12A	REV__ENSG00000168811|ENST00000699704|IL12A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8135986328125	2	510.801083	1019.58761	0.51644	0.0002638	-1.5622	-0.00079798	-1.0458	-0.00053418	510.80036539578134	79.717	0.54953	80.267	80.042	80.592	0.54945					18	12	2	0	0	0	0.20789	1	9168	9168		31.955	15.482	1	108360	+		41805	21522	27890	27903	47524	47524					0.07860271291337995
PLNRALSLH	9	Unmodified	_PLNRALSLH_					0	0	0			REV__ENSG00000168811|ENST00000699704|IL12A	REV__ENSG00000168811|ENST00000699704|IL12A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	510.801083	1019.58761	0.018348	9.3724E-06	-0.45863	-0.00023427	-0.44028	-0.0002249	510.80087721374855	79.792	0.46732	80.208	79.955	80.422	0.41621	-0.029065	0.0006156	NaN	24.203	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73972	+		41806	21522	27890	27903							0.07860271291337995
PLNRQKGG	8	Unmodified	_PLNRQKGG_					0	0	0			REV__ENST00000485376.5_1_X:149861842-149867705:+|nuORF	REV__ENST00000485376.5_1_X:149861842-149867705:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2520751953125	2	435.251226	868.487899	-1.1061	-0.00048143	1.1871	0.00051667	0.080963	3.5239E-05	435.2516688804781	93.233	1.4228	93.233	92.721	94.144	0					80	32	3	0	0	0	0.86288	1	9178	9178		26.796	2.5934	1	477960	+		41807	27524	27891	27904	47525	47525					0.04839453677391248
PLNRQKGG	8	Unmodified	_PLNRQKGG_					0	0	0			REV__ENST00000485376.5_1_X:149861842-149867705:+|nuORF	REV__ENST00000485376.5_1_X:149861842-149867705:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516174316406	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.86288	1	8257	8257		26.796	3.7536	1	2823900	+		41808	27524	27891	27904	47526	47526					0.04839453677391248
PLNRQKGG	8	Unmodified	_PLNRQKGG_					0	0	0			REV__ENST00000485376.5_1_X:149861842-149867705:+|nuORF	REV__ENST00000485376.5_1_X:149861842-149867705:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2532958984375	2	435.251226	868.487899	-0.16511	-7.1865E-05	0.27086	0.00011789	0.10575	4.6027E-05	435.25126703319626	93.058	1.7253	93.128	92.541	94.266	0.06987					99	40	3	0	0	0	0.80706	2	9619	9619;9637		35.201	6.0512	1	726460	+		41809	27524	27891	27904	47527;47528	47527					0.04839453677391248
PLNRQKGG	8	Unmodified	_PLNRQKGG_					0	0	0			REV__ENST00000485376.5_1_X:149861842-149867705:+|nuORF	REV__ENST00000485376.5_1_X:149861842-149867705:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2527160644531	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.86288	1	8440	8440		26.796	2.5934	1	3292300	+		41810	27524	27891	27904	47529	47529					0.04839453677391248
PLNRQKGG	8	Unmodified	_PLNRQKGG_					0	0	0			REV__ENST00000485376.5_1_X:149861842-149867705:+|nuORF	REV__ENST00000485376.5_1_X:149861842-149867705:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25323486328125	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.81548	1	7070	7070		20.482	3.1169	1	2494100	+		41811	27524	27891	27904	47530	47530					0.04839453677391248
PLNSPVRP	8	Unmodified	_PLNSPVRP_					0	0	0		ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	ENSG00000118412|ENST00000551025|CASP8AP2	ENSG00000118412|ENST00000551025|CASP8AP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2557678222656	2	440.255977	878.497401	-0.8618	-0.00037941	-0.60853	-0.00026791	-1.4703	-0.00064732	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.89962	1	6952	6952		38.806	1.647	1	1365500			41812	3028	27892	27905	47531	47531					0.05329221962904285
PLPACLTSLL	10	Unmodified	_PLPACLTSLL_					0	0	0			REV__ENST00000591223.5_1_21:47660768-47663350:+|nuORF	REV__ENST00000591223.5_1_21:47660768-47663350:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.76416015625	2	514.296453	1026.57835	0.0054152	2.785E-06	-0.94658	-0.00048682	-0.94116	-0.00048404	514.2956990914056	84.752	0.44301	85.192	84.944	85.387	0.43967					14	10	2	0	0	0	0.37624	1	9841	9841		37.159	0	1	146270	+		41813	26406	27893	27906	47532	47532					0.06612741890762663
PLPEPFSVVL	10	Unmodified	_PLPEPFSVVL_					0	0	0			REV__chr19:17781347-17781452|23|16.87|0.18|6.59|+|2|None,FCHO1|1	REV__chr19:17781347-17781452|23|16.87|0.18|6.59|+|2|None,FCHO1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3176879882812	2	549.3157	1096.61685	0.23279	0.00012788	3.2403	0.00178	3.4731	0.0019078	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.85694	1	10550	10550		21.96	1.9631	1	3004300	+		41814	15686	27894	27907	47533	47533					0.07240370796944262
PLPFPARKG	9	Unmodified	_PLPFPARKG_					0	0	0			REV__chr18:12984190-12985307|38|11.53|0.38|4.92|+|1|SEH1L,None|1	REV__chr18:12984190-12985307|38|11.53|0.38|4.92|+|1|SEH1L,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79632568359375	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.7932	1	4852	4852		19.36	0	1	792830	+		41815	15668	27895	27908	47534	47534					0.08446074267999393
PLPGLRQVLAM	11	Unmodified	_PLPGLRQVLAM_					0	0	0			REV__ENST00000315183.11_2_16:24741057-24741108:+|nuORF	REV__ENST00000315183.11_2_16:24741057-24741108:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8561401367188	2	597.855001	1193.69545	-0.32365	-0.0001935	3.4242	0.0020472	3.1006	0.0018537	598.3588954923197	94.611	4.9065	94.611	93.622	98.528	0					293	115	3	0	0	0	0.68378	1	9244	9244		34.173	1.3601	1	5706300	+		41816	24944	27896	27909	47535	47535					0.10634899830392897
PLPGLRQVLAM	11	Unmodified	_PLPGLRQVLAM_					0	0	0			REV__ENST00000315183.11_2_16:24741057-24741108:+|nuORF	REV__ENST00000315183.11_2_16:24741057-24741108:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.856201171875	2	597.855001	1193.69545	-1.2963	-0.00077498	3.3616	0.0020097	2.0653	0.0012348	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.68378	1	9197	9197		34.173	0.25091	1	2401200	+		41817	24944	27896	27909	47536	47536					0.10634899830392897
PLPHIAVLQ	9	Unmodified	_PLPHIAVLQ_					0	0	0		nc|ENSG00000162591|O75095-2|MEGF6;ENSG00000162591|ENST00000356575|MEGF6	nc|ENSG00000162591|O75095-2|MEGF6	nc|ENSG00000162591|O75095-2|MEGF6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3008728027344	2	494.302927	986.591301	-0.67103	-0.00033169	-3.8062	-0.0018814	-4.4772	-0.0022131	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.76996	1	10289	10289		33.516	3.0119	1	54981000			41818	5699	27897	27910	47537	47537					0.09746941065179726
PLPHPHHH	8	Unmodified	_PLPHPHHH_					0	0	0		ENSG00000080709|ENST00000673685|KCNN2	ENSG00000080709|ENST00000673685|KCNN2	ENSG00000080709|ENST00000673685|KCNN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	485.28570556640625	2	486.25156	970.488568	0.51311	0.0002495	-2.4876	-0.0012096	-1.9745	-0.00096008	486.250051156403	26.935	0.067532	26.963	26.907	26.974	0.02817					4	2	2	0	0	0	0.4196	1	1050	1050		10.185	0	1	33183			41819	1450	27898	27911	47538	47538					0.002142931170851625
PLPITLAGLLL	11	Unmodified	_PLPITLAGLLL_					0	0	0		ENST00000564661.1_1_16:766452-766668:+|nuORF	ENST00000564661.1_1_16:766452-766668:+|nuORF	ENST00000564661.1_1_16:766452-766668:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3406372070312	2	560.870643	1119.72673	-1.4169	-0.00079468	-1.2859	-0.00072124	-2.7028	-0.0015159	560.8699939420173	102.35	0.15423	102.49	102.37	102.53	0.13569					5	3	2	0	0	0	0.17737	1	10711	10711		10.866	0.6003	1	177940			41820	13890	27899	27912	47539	47539					0.17165796136146128
PLPLNHPVRV	10	Unmodified	_PLPLNHPVRV_					0	0	0			REV__ENST00000585091.1_1_17:79977515-79980737:-|nuORF	REV__ENST00000585091.1_1_17:79977515-79980737:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3434448242188	2	571.345658	1140.67676	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.99	1	117.08	116.58	117.58	0.090004								0	0	0	0.45132	1	12404	12404		16.473	0.83134	1		+		41821	29088	27900	27913	47540	47540					0.11205106250849894
PLPLVIGLRR	10	Unmodified	_PLPLVIGLRR_					0	0	0			REV__ENST00000269321.11_1_17:79825624-79826158:-|nuORF	REV__ENST00000269321.11_1_17:79825624-79826158:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.3795	1132.74445	0.48228	0.00027364	0.41131	0.00023337	0.89359	0.000507	567.3795380191509	92.203	0.16905	92.425	92.277	92.446	0.22157					5	3	2	0	0	0	0.37624	1	9304	9304		15.642	10.084	1	53058	+		41822	24521	27901	27914	47541	47541					0.18338556181629428
PLPMTCTPPAY	11	Carbamidomethyl (C)	_PLPMTC(Carbamidomethyl (C))TPPAY_	PLPMTC(1)TPPAY		PLPMTC(61)TPPAY		0	1	0			REV__ENSG00000132938|ENST00000612955|MTUS2	REV__ENSG00000132938|ENST00000612955|MTUS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	624.2929077148438	2	624.293585	1246.57262	0.6414	0.00040042	-1.287	-0.00080346	-0.6456	-0.00040304	624.292686131425	69.433	0.66615	69.562	69.21	69.876	0.1291					83	31	4	0	0	0	0.37938	1	6292	6292		60.972	6.2496	1	3312300	+		41823	19045	27902	27915	47542	47542	242				-0.04080724683194603
PLPNLNRKLFV	11	Unmodified	_PLPNLNRKLFV_					0	0	0			REV__ENST00000602421.5_1_1:39568798-39568972:+|nuORF	REV__ENST00000602421.5_1_1:39568798-39568972:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.60418701171875	3	437.602957	1309.78704	0.93747	0.00041024	2.6939	0.0011788	3.6313	0.0015891	437.60413783215915	15.683	0.47148	15.761	15.549	16.02	0.077959					33	20	2	0	0	0	0.76251	1	41	41		19.263	3.9296	1	53717	+		41824	29329	27903	27916	47543	47543					0.14453906519202064
PLPNPRTAAS	10	Unmodified	_PLPNPRTAAS_					0	0	0		ENST00000415495.5_1_19:42311603-42315272:+|nuORF;ENSG00000170956|ENST00000357396|CEACAM3	ENST00000415495.5_1_19:42311603-42315272:+|nuORF	ENST00000415495.5_1_19:42311603-42315272:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2823486328125	2	512.282723	1022.55089	-0.88857	-0.0004552	-1.7897	-0.00091686	-2.6783	-0.0013721	512.2817341917631	86.454	3.0125	86.454	85.618	88.63	0					129	69	2	0	0	0	0.82886	1	8207	8207		37.812	7.3079	1	265310			41825	6627	27904	27917	47544	47544					0.0405197467475773
PLPPARPPPA	10	Unmodified	_PLPPARPPPA_					0	0	0		ENST00000468067.5_1_13:99853753-99890777:+|nuORF	ENST00000468067.5_1_13:99853753-99890777:+|nuORF	ENST00000468067.5_1_13:99853753-99890777:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.7986755371094	2	506.800552	1011.58655	-0.28255	-0.0001432	1.9422	0.00098432	1.6597	0.00084112	506.80140373255165	50.862	1.8071	50.77	50.35	52.158	-0.091797					82	54	2	0	0	0	0.85939	1	3979	3979		23.042	3.6825	1	131380			41826	12168	27905	27918	47545	47545					0.08122056922411502
PLPPGVPPPQ	10	Unmodified	_PLPPGVPPPQ_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.2445373535156	2	499.78711	997.559667	0.19483	9.7372E-05	-4.1016	-0.0020499	-3.9068	-0.0019526	499.7848899296981	22.078	1.1524	21.635	21.19	22.342	-0.44324					54	25	4	0	0	0	0.37624	1	809	809		17.365	0	1	243250			41827	3217	27906	27919	47546	47546					0.06078948311221666
PLPPHLIFLF	10	Unmodified	_PLPPHLIFLF_					0	0	0		ENST00000299427.10_2_11:6635118-6635532:-|nuORF	ENST00000299427.10_2_11:6635118-6635532:-|nuORF	ENST00000299427.10_2_11:6635118-6635532:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.7550048828125	2	597.357702	1192.70085	-2.0182	-0.0012056	-1.0245	-0.00061199	-3.0427	-0.0018176	597.3571041294518	43.108	0.60137	43.882	43.582	44.183	0.7738					21	14	2	0	0	0	0.37624	1	3854	3854		26.796	1.3459	1	356930			41828	9782	27907	27920	47547	47547					0.11220946684488808
PLPPHLIFLF	10	Unmodified	_PLPPHLIFLF_					0	0	0		ENST00000299427.10_2_11:6635118-6635532:-|nuORF	ENST00000299427.10_2_11:6635118-6635532:-|nuORF	ENST00000299427.10_2_11:6635118-6635532:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	597.357702	1192.70085	-0.62492	-0.0003733	-2.6773	-0.0015993	-3.3022	-0.0019726	597.3562666353155	43.434	0.48013	43.884	43.603	44.083	0.45025	0.001093	-0.0013006	NaN	44.531	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	305090			41829	9782	27907	27920							0.11220946684488808
PLPPKKAKKL	10	Unmodified	_PLPPKKAKKL_					0	0	0			REV__nc|ENSG00000135540|Q5SYE7|NHSL1	REV__nc|ENSG00000135540|Q5SYE7|NHSL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3401489257812	2	560.384251	1118.75395	0.3948	0.00022124	-1.6553	-0.00092762	-1.2605	-0.00070638	560.3834965123863	102.27	0.15728	102.46	102.41	102.56	0.19484					6	3	2	0	0	0	0.37624	1	10758	10758		10.866	7.4555	1	254000	+		41830	29866	27908	27921	47548	47548					0.19932324467185936
PLPPSHKFRKF	11	Unmodified	_PLPPSHKFRKF_					0	0	0		nc|ENSG00000180592|Q1XH10-2|SKIDA1;ENSG00000180592|ENST00000449193|SKIDA1	nc|ENSG00000180592|Q1XH10-2|SKIDA1	nc|ENSG00000180592|Q1XH10-2|SKIDA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.93182373046875	3	451.931185	1352.77173	0.73765	0.00033337	2.5596	0.0011568	3.2973	0.0014901	451.932241061631	98.904	2.3627	99.06	97.538	99.901	0.15659					136	54	4	0	0	0	0.7896	1	10210	10210		13.508	1.5756	1	302530			41831	7335	27909	27922	47549	47549					0.10945039722014371
PLPPSYVSLIM	11	Unmodified	_PLPPSYVSLIM_					0	0	0			REV__ENSG00000149742|ENST00000279178|SLC22A9	REV__ENSG00000149742|ENST00000279178|SLC22A9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.836669921875	2	608.835942	1215.65733	2.5762	0.0015685	-0.0060391	-3.6768E-06	2.5701	0.0015648	608.8357109486794	111.04	0.51165	111.08	110.8	111.31	0.041832					34	15	3	0	0	0	0.78309	1	13444	13444		14.865	0	1	200410	+		41832	20192	27910	27923	47550	47550					0.05812969125054224
PLPRGTPPPVF	11	Unmodified	_PLPRGTPPPVF_					0	0	0		nc|ENSG00000033030|Q6NZY4-2|ZCCHC8;ENSG00000033030|ENST00000633063|ZCCHC8	nc|ENSG00000033030|Q6NZY4-2|ZCCHC8	nc|ENSG00000033030|Q6NZY4-2|ZCCHC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3425903320312	2	589.340041	1176.66553	2.472	0.0014569	2.3274	0.0013717	4.7995	0.0028285	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.58425	3	10145	10108;10145;10350		45.972	4.5456	1	16740000			41833	888	27911	27924	47551;47552;47553	47552					0.0842628415668969
PLPRGTPPPVF	11	Unmodified	_PLPRGTPPPVF_					0	0	0		nc|ENSG00000033030|Q6NZY4-2|ZCCHC8;ENSG00000033030|ENST00000633063|ZCCHC8	nc|ENSG00000033030|Q6NZY4-2|ZCCHC8	nc|ENSG00000033030|Q6NZY4-2|ZCCHC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3428344726562	2	589.340041	1176.66553	0.83312	0.00049099	4.0027	0.002359	4.8358	0.00285	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.7144	1	9813	9813		29.17	0.020503	1	20363000			41834	888	27911	27924	47554	47554					0.0842628415668969
PLPRLSVKKLL	11	Unmodified	_PLPRLSVKKLL_					0	0	0		ENSG00000118873|ENST00000358951|RAB3GAP2	ENSG00000118873|ENST00000358951|RAB3GAP2	ENSG00000118873|ENST00000358951|RAB3GAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	632.4300537109375	2	632.42919	1262.84383	-0.16111	-0.00010189	1.4498	0.00091687	1.2887	0.00081498	632.4298123182796	108.36	0.78529	108.31	108.01	108.8	-0.042404					66	29	3	0	0	0	0.76699	1	11794	11794		18.262	4.808	1	4385300			41835	3046	27912	27925	47555	47555					0.22291954075762987
PLPRLSVKKLL	11	Unmodified	_PLPRLSVKKLL_					0	0	0		ENSG00000118873|ENST00000358951|RAB3GAP2	ENSG00000118873|ENST00000358951|RAB3GAP2	ENSG00000118873|ENST00000358951|RAB3GAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	632.4292602539062	2	632.42919	1262.84383	-1.1838	-0.00074867	2.4496	0.0015492	1.2658	0.00080053	632.4305366673894	108.36	0.62795	108.38	108.12	108.75	0.020561					49	27	3	0	0	0	0.80516	1	11566	11566		10.265	0.5596	1	2641800			41836	3046	27912	27925	47556	47556					0.22291954075762987
PLPRPVRSR	9	Unmodified	_PLPRPVRSR_					0	0	0			REV__ENST00000258930.7_1_15:78423605-78423815:-|nuORF	REV__ENST00000258930.7_1_15:78423605-78423815:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3117065429688	2	539.335624	1076.6567	1.0105	0.00054499	-0.55619	-0.00029997	0.45429	0.00024501	539.3351649014868	17.146	0.20413	17.064	16.941	17.145	-0.0821					15	7	3	0	0	0	0.20789	1	209	209		27.882	1.1893	1	52008	+		41837	24358	27913	27926	47557	47557					0.12143355310877268
PLPRPVRSR	9	Unmodified	_PLPRPVRSR_					0	0	0			REV__ENST00000258930.7_1_15:78423605-78423815:-|nuORF	REV__ENST00000258930.7_1_15:78423605-78423815:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	539.335624	1076.6567	0.46408	0.0002503	-0.54044	-0.00029148	-0.076355	-4.1181E-05	539.3352209245297	17.12	0.21493	17.041	16.915	17.13	-0.079056	0.011023	0.00012489	NaN	27.882	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60490	+		41838	24358	27913	27926							0.12143355310877268
PLPRRLRE	8	Unmodified	_PLPRRLRE_					0	0	0			REV__ENSG00000198064|ENST00000697092|NPIPB13	REV__ENSG00000198064|ENST00000697092|NPIPB13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8201904296875	2	518.82235	1035.63015	-0.34633	-0.00017969	-3.8038	-0.0019735	-4.1502	-0.0021532	518.8202184193593	48.507	1.0068	48.976	48.668	49.675	0.46941					65	24	4	0	0	0	0.86288	1	4680	4680		26.796	6.3143	1	3465900	+		41839	23295	27914	27927	47558	47558					0.11375666419553454
PLPRRLRE	8	Unmodified	_PLPRRLRE_					0	0	0			REV__ENSG00000198064|ENST00000697092|NPIPB13	REV__ENSG00000198064|ENST00000697092|NPIPB13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8201904296875	2	518.82235	1035.63015	-0.16117	-8.3619E-05	-3.8556	-0.0020004	-4.0168	-0.002084	518.8201883857264	52.919	1.3295	53.533	52.991	54.321	0.61436					72	31	3	0	0	0	0.79403	2	5328	5307;5328		63.306	7.8021	1	3507900	+		41840	23295	27914	27927	47559;47560	47560					0.11375666419553454
PLPRSLVRVM	10	Unmodified	_PLPRSLVRVM_					0	0	0		nc|ENSG00000155229|Q96T76-8|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	584.3560791015625	2	584.355168	1166.69578	0.8115	0.00047421	0.56134	0.00032802	1.3728	0.00080223	584.3555753434755	92.506	2.8121	92.665	91.311	94.123	0.15874					185	66	3	0	0	0	0.85251	1	9287	9287		19.997	0.89325	1	722410			41841	15006	27915	27928	47561	47561					0.1191031955024755
PLPRSYISL	9	Unmodified	_PLPRSYISL_					0	0	0			REV__ENSG00000196600|ENST00000306494|SLC22A25	REV__ENSG00000196600|ENST00000306494|SLC22A25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.30322265625	2	523.305667	1044.59678	-0.50611	-0.00026485	-3.5572	-0.0018615	-4.0633	-0.0021264	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.78983	1	9991	9991		27.882	1.0861	1	3970100	+		41842	23152	27916	27929	47562	47562					0.0762661985700106
PLPTGKRV	8	Unmodified	_PLPTGKRV_					0	0	0		ENST00000368314.5_1_6:127587778-127587985:+|nuORF	ENST00000368314.5_1_6:127587778-127587985:+|nuORF	ENST00000368314.5_1_6:127587778-127587985:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.2733154296875	2	434.27417	866.533787	-0.474	-0.00020585	-0.78373	-0.00034035	-1.2577	-0.0005462	434.2735892156423	82.201	1.4504	82.627	82.08	83.531	0.42646					66	35	3	0	0	0	0.87276	1	9507	9507		29.842	0	1	1211300			41843	10588	27917	27930	47563	47563					0.09518098859609836
PLPTHIPP	8	Unmodified	_PLPTHIPP_					0	0	0		nc|ENSG00000204138|Q8IZ21-3|PHACTR4;ENSG00000204138|ENST00000373839|PHACTR4;nc|ENSG00000204138|Q8IZ21-2|PHACTR4;ENST00000493669.2_1_1:28733953-28817463:+|nuORF	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	nc|ENSG00000204138|Q8IZ21-3|PHACTR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.25396728515625	2	436.255446	870.496338	2.1857	0.00095352	-3.3164	-0.0014468	-1.1307	-0.00049329	436.2538705634068	114.35	2.7328	114.38	114.11	116.84	0.026459					117	82	2	0	0	0	0.87276	1	12546	12546		29.842	1.5873	1	78531			41844	8418	27918	27931	47564	47564					0.0559100759400053
PLPTLMHGGT	10	Unmodified	_PLPTLMHGGT_					0	0	0			REV__ENST00000481284.5_1_20:33462930-33515014:+|nuORF	REV__ENST00000481284.5_1_20:33462930-33515014:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.2705078125	2	512.268227	1022.5219	2.157	0.001105	2.613	0.0013385	4.77	0.0024435	512.2694110072075	106.86	1.3321	106.96	106.54	107.87	0.10396					84	53	2	0	0	0	0.80179	1	13031	13031		39.253	0	1	212630	+		41845	18936	27919	27932	47565	47565					0.011541140541226014
PLPTSPALHL	10	Unmodified	_PLPTSPALHL_					0	0	0		ENST00000503131.1_2_17:48206901-48207210:-|nuORF	ENST00000503131.1_2_17:48206901-48207210:-|nuORF	ENST00000503131.1_2_17:48206901-48207210:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3035278320312	2	523.305667	1044.59678	-0.1515	-7.9283E-05	-3.8817	-0.0020313	-4.0332	-0.0021106	523.3034922697021	101.03	1.8684	101.23	100.28	102.15	0.2058					77	44	4	0	0	0	0.86452	1	10588	10588		30.504	5.0535	1	790350			41846	12875	27920	27933	47566	47566					0.0762661985700106
PLPTVFLSIKH	11	Unmodified	_PLPTVFLSIKH_					0	0	0		ENST00000475678.5_1_2:219130391-219130901:-|nuORF;ENST00000465442.1_1_2:219130391-219131358:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	ENST00000475678.5_1_2:219130391-219130901:-|nuORF	ENST00000475678.5_1_2:219130391-219130901:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.374267578125	2	626.376623	1250.73869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.616	1	54.707	54.207	55.207	0.091167								0	0	0	0.56276	1	4528	4528		36.447	11.321	1				41847	12111	27921	27934	47567	47567					0.123354128793153
PLPVLGLLRHH	11	Unmodified	_PLPVLGLLRHH_					0	0	0			REV__ENST00000445118.6_1_1:790287-790512:+|nuORF	REV__ENST00000445118.6_1_1:790287-790512:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3917846679688	2	626.387857	1250.76116	-0.23009	-0.00014413	-2.7034	-0.0016934	-2.9335	-0.0018375	626.3860396121743	109.87	0.089668	109.81	109.76	109.85	-0.055084					9	4	3	0	0	0	0.17564	1	11949	11949		14.865	0	1	817670	+		41848	26794	27922	27935	47568	47568					0.14581057067630354
PLPVPSNR	8	Unmodified	_PLPVPSNR_					0	0	0			REV__ENST00000340726.7_1_8:72273997-72274438:-|nuORF	REV__ENST00000340726.7_1_8:72273997-72274438:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2561340332031	2	440.255977	878.497401	0.43383	0.000191	-1.7245	-0.00075924	-1.2907	-0.00056825	440.2551344280369	66.668	0.61041	66.795	66.527	67.137	0.12649					60	27	3	0	0	0	0.85277	1	5952	5952		25.45	0.94616	1	272000	+		41849	25252	27923	27936	47569	47569					0.05329221962904285
PLPVVPSRLP	10	Unmodified	_PLPVVPSRLP_					0	0	0		ENST00000489446.1_1_2:23755466-23866061:+|nuORF;nc|ENSG00000119771|Q96CT2-2|KLHL29;ENSG00000119771|ENST00000486442|KLHL29	ENST00000489446.1_1_2:23755466-23866061:+|nuORF	ENST00000489446.1_1_2:23755466-23866061:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8184814453125	2	537.837134	1073.65972	0.38258	0.00020577	-3.6393	-0.0019573	-3.2567	-0.0017516	537.8352578895898	18.297	0.27912	17.82	17.657	17.937	-0.47694					8	5	2	0	0	0	0.37624	1	350	350		17.365	10.629	1	43592			41850	3094	27924	27937	47570	47570					0.12583185645053163
PLQEYYSAVLN	11	Unmodified	_PLQEYYSAVLN_					0	0	0			REV__nc|ENSG00000054983|P54803-5|GALC	REV__nc|ENSG00000054983|P54803-5|GALC	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5975646972656	3	432.887199	1295.63977	-1.8314	-0.0007928	-2.3935	-0.0010361	-4.2249	-0.0018289	432.8862427828304	105.78	2.7572	105.86	104.53	107.29	0.073112					109	67	2	0	0	0	0.17334	1	11253	11253		41.08	9.0459	1	152310	+		41851	29694	27925	27938	47571	47571					0.0037734512377483043
PLQIGTRPL	9	Unmodified	_PLQIGTRPL_					0	0	0			REV__ENST00000497028.5_1_10:46147461-46159236:-|nuORF	REV__ENST00000497028.5_1_10:46147461-46159236:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.76190185546875	2	497.805834	993.597115	-0.13589	-6.7645E-05	-0.56412	-0.00028082	-0.70001	-0.00034847	497.80541876697845	65.99	0.65929	66.543	66.082	66.741	0.5526					29	17	2	0	0	0	0.20789	1	7202	7202		35.618	0	1	140740	+		41852	25165	27926	27939	47572	47572					0.10006039576853709
PLQMVRVVA	9	Unmodified	_PLQMVRVVA_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.800537109375	2	506.802237	1011.58992	0.2762	0.00013998	-2.9987	-0.0015198	-2.7225	-0.0013798	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.78058	1	3698	3698		30.504	3.8107	1	416790	+		41853	17657	27927	27940	47573	47573					0.08458983704770162
PLQMVRVVA	9	Unmodified	_PLQMVRVVA_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8000183105469	2	506.802237	1011.58992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.453	1	43.403	42.903	43.903	-0.050308								0	0	0	0.2969	1	2993	2993		31.955	1.4512	1		+		41854	17657	27927	27940	47574	47574					0.08458983704770162
PLQPPAPS	8	Unmodified	_PLQPPAPS_					0	0	0			REV__ENST00000448464.6_1_8:95953287-95961571:-|nuORF	REV__ENST00000448464.6_1_8:95953287-95961571:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.72344970703125	2	403.723978	805.433404	-0.18865	-7.6163E-05	0.69708	0.00028143	0.50843	0.00020527	403.72406510885264	65.035	1.1804	65.04	64.276	65.456	0.0046921					55	37	2	0	0	0	0.90465	1	6138	6138		40.573	5.3719	1	159570	+		41855	26839	27928	27941	47575	47575					0.022904418059397358
PLQPPAPS	8	Unmodified	_PLQPPAPS_					0	0	0			REV__ENST00000448464.6_1_8:95953287-95961571:-|nuORF	REV__ENST00000448464.6_1_8:95953287-95961571:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.72393798828125	2	403.723978	805.433404	0.40958	0.00016536	-0.076812	-3.1011E-05	0.33277	0.00013435	403.72380872064997	64.881	1.7093	65.005	63.854	65.563	0.12396					144	69	3	0	0	0	0.92457	1	5751	5751		47.916	0	1	1091100	+		41856	26839	27928	27941	47576	47576					0.022904418059397358
PLQPTVSLVLP	11	Unmodified	_PLQPTVSLVLP_					0	0	0		ENST00000413305.5_1_3:8675424-8686428:-|nuORF;ENST00000495366.5_1_3:8675888-8681636:-|nuORF	ENST00000413305.5_1_3:8675424-8686428:-|nuORF	ENST00000413305.5_1_3:8675424-8686428:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353515625	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.74763	1	12820	12820		22.58	5.2147	1	3937500			41857	11347	27929	27942	47577	47577					0.12132017751082458
PLQSPAPP	8	Unmodified	_PLQSPAPP_					0	0	0			REV__ENST00000526137.1_1_11:65405732-65405837:+|nuORF	REV__ENST00000526137.1_1_11:65405732-65405837:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.72381591796875	2	403.723978	805.433404	-1.8572	-0.00074981	2.1457	0.00086627	0.28846	0.00011646	403.7247227583041	64.772	1.8283	64.897	63.712	65.54	0.12545					133	73	3	0	0	0	0.91472	1	5726	5726		44.117	0	1	1035700	+		41858	28197	27930	27943	47578	47578					0.022904418059397358
PLQSQVLPPPQ	11	Unmodified	_PLQSQVLPPPQ_					0	0	0			REV__ENSG00000185728|ENST00000539294|YTHDF3	REV__ENSG00000185728|ENST00000539294|YTHDF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2460632324219	3	401.895917	1202.66592	2.0042	0.0008055	-3.5358	-0.001421	-1.5315	-0.00061551	401.8943129568205	20.853	0.61763	20.394	20.192	20.809	-0.4591					25	14	2	0	0	0	0.16719	1	723	723		45.908	21.676	1	93346	+		41859	22788	27931	27944	47579	47579					0.07269659085886815
PLQVLAAL	8	Unmodified	_PLQVLAAL_					0	0	0		ENSG00000158008|ENST00000374280|EXTL1	ENSG00000158008|ENST00000374280|EXTL1	ENSG00000158008|ENST00000374280|EXTL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.26666259765625	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.83466	1	2516	2516		23.037	1.3344	1	2097300			41860	5456	27932	27945	47580	47580					0.09792178253792372
PLQVTSGDSLV	11	Unmodified	_PLQVTSGDSLV_					0	0	0			REV__nc|ENSG00000185684|Q6ZTU2-5|EP400P1	REV__nc|ENSG00000185684|Q6ZTU2-5|EP400P1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.302734375	2	558.300778	1114.587	1.0403	0.00058079	0.56259	0.00031409	1.6029	0.00089488	558.3007929714444	27.952	0.71391	27.698	27.454	28.168	-0.25465					33	16	3	0	0	0	0.63176	1	1664	1664		40.778	6.6056	1	183130	+		41861	30099	27933	27946	47581	47581					0.034293870609417354
PLRDFAGPAI	10	Unmodified	_PLRDFAGPAI_					0	0	0			REV__ENSG00000178732|ENST00000692618|GP5	REV__ENSG00000178732|ENST00000692618|GP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.7921142578125	2	528.795466	1055.57638	0.32349	0.00017106	-4.1241	-0.0021808	-3.8006	-0.0020098	528.7931534014222	36.129	0.71097	36.069	35.752	36.463	-0.060337					57	20	4	0	0	0	0.81018	1	1948	1948		38.806	1.647	1	620290	+		41862	22292	27934	27947	47582	47582					0.0508144919717779
PLRFKQGQLL	10	Unmodified	_PLRFKQGQLL_					0	0	0			REV__ENST00000339728.5_1_2:235404101-235404395:-|nuORF	REV__ENST00000339728.5_1_2:235404101-235404395:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.5805969238281	3	400.580152	1198.71863	2.7176	0.0010886	-1.7644	-0.00070678	0.95322	0.00038184	400.57928348734663	112.87	0.76526	112.84	112.7	113.46	-0.024811					36	18	3	0	0	0	0.86802	1	12472	12472		27.047	0.29761	1	3158500	+		41863	25237	27935	27948	47583	47583					0.12721661939372098
PLRFRKRTLH	10	Unmodified	_PLRFRKRTLH_					0	0	0		nc|ENSG00000180881|Q9BXY5-3|CAPS2;ENST00000409004.5_1_12:75670025-75710066:-|nuORF;nc|ENSG00000180881|Q9BXY5-2|CAPS2;nc|ENSG00000180881|Q9BXY5|CAPS2;ENSG00000180881|ENST00000699294|CAPS2;nc|ENSG00000180881|Q9BXY5-5|CAPS2;ENST00000336815.10_1_12:75687137-75710066:-|nuORF	nc|ENSG00000180881|Q9BXY5-3|CAPS2	nc|ENSG00000180881|Q9BXY5-3|CAPS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.9393310546875	3	441.942195	1322.80476	-1.6543	-0.0007311	-3.5636	-0.0015749	-5.2179	-0.002306	441.9404880038731	55.736	1.19	55.736	54.998	56.188	0					100	33	4	0	0	0	0.85441	2	4712	4712;4758		26.063	6.8007	1	347630			41864	7355	27936	27949	47584;47585	47584					0.15626666564753577
PLRGRRQLG	9	Unmodified	_PLRGRRQLG_					0	0	0			REV__ENST00000377564.3_9:43684935-43685160:+|nuORF	REV__ENST00000377564.3_9:43684935-43685160:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3111572265625	2	526.825424	1051.63629	0.17797	9.3761E-05	0.408	0.00021494	0.58597	0.00030871	527.325641674786	82.448	0.16748	82.874	82.79	82.958	0.42645					5	3	2	0	0	0	0.20789	1	9549	9549		31.955	0	1	29619	+		41865	25869	27937	27950	47586	47586					0.11254184651079413
PLRHALSALH	10	Unmodified	_PLRHALSALH_					0	0	0			REV__ENST00000539777.5_1_1:168066332-168105620:-|nuORF	REV__ENST00000539777.5_1_1:168066332-168105620:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.3239135742188	2	557.827632	1113.64071	0.40844	0.00022784	-4.4826	-0.0025005	-4.0742	-0.0022727	557.8269312611109	51.132	1.327	51.567	51.202	52.529	0.43505					64	31	4	0	0	0	0.71042	1	5049	5049		44.117	3.3386	1	349150	+		41866	24533	27938	27951	47587	47587					0.08843649073969573
PLRHALSALH	10	Unmodified	_PLRHALSALH_					0	0	0			REV__ENST00000539777.5_1_1:168066332-168105620:-|nuORF	REV__ENST00000539777.5_1_1:168066332-168105620:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	557.827632	1113.64071	0.40844	0.00022784	-4.4826	-0.0025005	-4.0742	-0.0022727	557.8269312611109	51.132	1.327	51.567	51.202	52.529	0.43505	0	0	NaN	44.117	64	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	349150	+		41867	24533	27938	27951							0.08843649073969573
PLRHRLSGLA	10	Unmodified	_PLRHRLSGLA_					0	0	0		ENST00000431948.5_1_7:51111166-51111361:-|nuORF	ENST00000431948.5_1_7:51111166-51111361:-|nuORF	ENST00000431948.5_1_7:51111166-51111361:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3403930664062	2	560.340907	1118.66726	0.37477	0.00021	-1.7233	-0.00096563	-1.3485	-0.00075563	560.3398544470892	89.255	3.3389	89.463	87.161	90.5	0.2073					181	78	4	0	0	0	0.8651	1	8924	8924		25.574	0.12388	1	715790			41868	11656	27939	27952	47588	47588					0.11267337965318802
PLRHVMVPL	9	Unmodified	_PLRHVMVPL_					0	0	0			REV__ENST00000460924.6_1_11:112046255-112064455:+|nuORF	REV__ENST00000460924.6_1_11:112046255-112064455:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.3184814453125	2	531.318054	1060.62156	-0.04293	-2.281E-05	2.5062	0.0013316	2.4632	0.0013088	531.3190516758626	94.867	1.8687	95.098	94.611	96.479	0.23103					163	44	5	0	0	0	0.7932	1	9751	9751		26.796	0.10319	1	2940800	+		41869	23247	27940	27953	47589	47589					0.0936697645872755
PLRKFLLPAP	10	Unmodified	_PLRKFLLPAP_					0	0	0			REV__ENST00000216780.8_1_14:24563387-24566117:+|nuORF	REV__ENST00000216780.8_1_14:24563387-24566117:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	576.3692016601562	2	576.368601	1150.72265	-0.70382	-0.00040566	1.5566	0.00089719	0.85281	0.00049153	576.3693112685854	39.803	1.7451	39.772	38.985	40.73	-0.03027					120	44	4	0	0	0	0.85939	1	2761	2761		23.042	6.5693	1	583880	+		41870	24137	27941	27954	47590	47590					0.15331751433086538
PLRKFLLPAP	10	Unmodified	_PLRKFLLPAP_					0	0	0			REV__ENST00000216780.8_1_14:24563387-24566117:+|nuORF	REV__ENST00000216780.8_1_14:24563387-24566117:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.850341796875	2	576.368601	1150.72265	-0.463	-0.00026686	1.2879	0.00074231	0.82491	0.00047545	576.3693147654042	50.912	0.70406	51.347	50.913	51.617	0.43505					25	16	2	0	0	0	0.37624	1	5051	5051		17.365	5.1581	1	160690	+		41871	24137	27941	27954	47591	47591					0.15331751433086538
PLRKFLLPAP	10	Unmodified	_PLRKFLLPAP_					0	0	0			REV__ENST00000216780.8_1_14:24563387-24566117:+|nuORF	REV__ENST00000216780.8_1_14:24563387-24566117:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	576.368601	1150.72265	-1.0713	-0.00061747	2.418	0.0013937	1.3467	0.0007762	576.3698834255821	51.205	0.77994	51.205	50.881	51.661	0	-0.024515	0.0011196	NaN	17.365	45	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85651	+		41872	24137	27941	27954							0.15331751433086538
PLRKFLLPAP	10	Unmodified	_PLRKFLLPAP_					0	0	0			REV__ENST00000216780.8_1_14:24563387-24566117:+|nuORF	REV__ENST00000216780.8_1_14:24563387-24566117:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	576.368601	1150.72265	-0.063731	-3.6733E-05	1.3332	0.00076841	1.2695	0.00073168	576.3692841012346	51.337	2.0848	51.345	50.777	52.862	0.0077477	0.11507	-0.00013094	NaN	17.365	76	54	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114480	+		41873	24137	27941	27954							0.15331751433086538
PLRKFLLPAP	10	Unmodified	_PLRKFLLPAP_					0	0	0			REV__ENST00000216780.8_1_14:24563387-24566117:+|nuORF	REV__ENST00000216780.8_1_14:24563387-24566117:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	576.368601	1150.72265	0.42701	0.00024612	0.97076	0.00055952	1.3978	0.00080564	576.369074406291	50.971	1.1416	51.021	50.306	51.447	0.049896	-0.20829	-0.00054872	NaN	17.365	65	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	228540	+		41874	24137	27941	27954							0.15331751433086538
PLRKGPVKVTT	11	Unmodified	_PLRKGPVKVTT_					0	0	0			REV__ENST00000478320.1_1_7:150825672-150834824:+|nuORF	REV__ENST00000478320.1_1_7:150825672-150834824:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.3828125	2	598.379697	1194.74484	0.38806	0.00023221	2.9197	0.0017471	3.3077	0.0019793	598.3812845043491	40.552	1.126	40.504	40.15	41.276	-0.04789					105	43	3	0	0	0	0.77061	1	2571	2571		17.468	0.99486	1	664060	+		41875	19084	27942	27955	47592	47592					0.15525931110823876
PLRKLPFRAFR	11	Unmodified	_PLRKLPFRAFR_					0	0	0		ENST00000460723.5_1_22:32017538-32058194:-|nuORF;ENSG00000241878|ENST00000439502|PISD	ENST00000460723.5_1_22:32017538-32058194:-|nuORF	ENST00000460723.5_1_22:32017538-32058194:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.6232604980469	3	467.626096	1399.85646	-1.7204	-0.00080451	-3.3997	-0.0015898	-5.1201	-0.0023943	467.62444178196154	107.87	0.60316	107.91	107.33	107.93	0.036118					61	14	6	0	0	0	0.74771	1	11499	11499		22.562	4.7284	1	13916000			41876	8796	27943	27956	47593	47593					0.17252410258629425
PLRKLSSSSA	10	Unmodified	_PLRKLSSSSA_					0	0	0		ENSG00000143772|ENST00000429204|ITPKB;nc|ENSG00000143772|P27987-2|ITPKB	ENSG00000143772|ENST00000429204|ITPKB	ENSG00000143772|ENST00000429204|ITPKB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.30322265625	2	523.303655	1044.59276	-0.1734	-9.0741E-05	-0.15994	-8.3699E-05	-0.33334	-0.00017444	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.86348	1	8704	8704		31.53	1.0262	1	13808000			41877	4660	27944	27957	47594	47594					0.07224530363305348
PLRKLSSSSA	10	Unmodified	_PLRKLSSSSA_					0	0	0		ENSG00000143772|ENST00000429204|ITPKB;nc|ENSG00000143772|P27987-2|ITPKB	ENSG00000143772|ENST00000429204|ITPKB	ENSG00000143772|ENST00000429204|ITPKB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3034057617188	2	523.303655	1044.59276	0.69703	0.00036476	-1.0638	-0.00055667	-0.36673	-0.00019191	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.8651	1	8440	8440		25.574	1.0549	1	3801600			41878	4660	27944	27957	47595	47595					0.07224530363305348
PLRLAFLTT	9	Unmodified	_PLRLAFLTT_					0	0	0			REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3140869140625	2	516.316035	1030.61752	-0.68072	-0.00035146	-3.5737	-0.0018451	-4.2544	-0.0021966	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.78536	1	10395	10395		29.15	0	1	39641000	+		41879	27474	27945	27958	47596	47596					0.10343210236624145
PLRLAFLTT	9	Unmodified	_PLRLAFLTT_					0	0	0			REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3121948242188	2	516.316035	1030.61752	-0.63193	-0.00032628	-2.3488	-0.0012127	-2.9807	-0.001539	516.3149967454959	103.62	1.1732	103.62	103.18	104.36	0					52	28	2	0	0	0	0.77546	1	10665	10665		31.955	6.5047	1	411250	+		41880	27474	27945	27958	47597	47597					0.10343210236624145
PLRLAFLTT	9	Unmodified	_PLRLAFLTT_					0	0	0			REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3142700195312	2	516.316035	1030.61752	-0.25527	-0.0001318	-3.4341	-0.0017731	-3.6894	-0.0019049	516.3141964907301	102.01	1.1313	102.2	101.89	103.02	0.19484					90	27	4	0	0	0	0.78536	1	10743	10743		29.15	0	1	1199700	+		41881	27474	27945	27958	47598	47598					0.10343210236624145
PLRLAFLTT	9	Unmodified	_PLRLAFLTT_					0	0	0			REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3135986328125	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.3064	-0.0011908	-3.8683	-0.0019972	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.7932	1	10714	10714		24.203	0	1	1268100	+		41882	27474	27945	27958	47599	47599					0.10343210236624145
PLRLAFLTT	9	Unmodified	_PLRLAFLTT_					0	0	0			REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3131103515625	2	516.316035	1030.61752	-1.5618	-0.0008064	-1.828	-0.00094385	-3.3899	-0.0017503	516.315128223729	103.33	1.0546	103.45	103.07	104.12	0.11494					63	26	3	0	0	0	0.78536	1	10917	10917		29.15	0	1	813320	+		41883	27474	27945	27958	47600	47600					0.10343210236624145
PLRLAFLTT	9	Unmodified	_PLRLAFLTT_					0	0	0			REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	REV__ENST00000482838.1_1_6:32947542-32948492:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.315185546875	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12898	12898		21.96	1.4781	1	4038100	+		41884	27474	27945	27958	47601	47601					0.10343210236624145
PLRLDGTA	8	Unmodified	_PLRLDGTA_					0	0	0		nc|ENSG00000157211|Q5VXM1-1|CDCP2	nc|ENSG00000157211|Q5VXM1-1|CDCP2	nc|ENSG00000157211|Q5VXM1-1|CDCP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7380065917969	2	421.74016	841.465767	2.0413	0.0008609	2.0323	0.00085709	4.0736	0.001718	421.74101918086046	73.852	0.63034	73.896	73.702	74.332	0.043648					46	28	2	0	0	0	0.90465	1	7137	7137		40.573	7.7602	1	150240			41885	15021	27946	27959	47602	47602					0.03869229208942215
PLRLRSIHEY	10	Unmodified	_PLRLRSIHEY_					0	0	0		ENST00000495417.5_1_19:55105185-55110756:+|nuORF;nc|ENSG00000131042|Q8N423-4|LILRB2;ENSG00000104974|ENST00000251372|LILRA1;nc|ENSG00000131042|Q8N423-3|LILRB2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2	ENST00000495417.5_1_19:55105185-55110756:+|nuORF	ENST00000495417.5_1_19:55105185-55110756:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3632202148438	2	642.364579	1282.7146	-0.045478	-2.9214E-05	-1.9739	-0.001268	-2.0194	-0.0012972	642.3633210062756	111.34	0.40622	111.28	111	111.41	-0.059937					19	12	2	0	0	0	0.71042	1	12116	12116		44.117	1.2525	1	5408100			41886	2176	27947	27960	47603	47603					0.08455572445677717
PLRLRSIHEY	10	Unmodified	_PLRLRSIHEY_					0	0	0		ENST00000495417.5_1_19:55105185-55110756:+|nuORF;nc|ENSG00000131042|Q8N423-4|LILRB2;ENSG00000104974|ENST00000251372|LILRA1;nc|ENSG00000131042|Q8N423-3|LILRB2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2	ENST00000495417.5_1_19:55105185-55110756:+|nuORF	ENST00000495417.5_1_19:55105185-55110756:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.3633422851562	2	642.364579	1282.7146	0.94221	0.00060524	-4.128	-0.0026517	-3.1858	-0.0020465	642.362532628932	110	1.3046	110.07	109.67	110.98	0.073685					156	47	4	0	0	0	0.6116	2	11835	11835;11856		49.442	6.5773	1	7000400			41887	2176	27947	27960	47604;47605	47604					0.08455572445677717
PLRLRSIHEY	10	Unmodified	_PLRLRSIHEY_					0	0	0		ENST00000495417.5_1_19:55105185-55110756:+|nuORF;nc|ENSG00000131042|Q8N423-4|LILRB2;ENSG00000104974|ENST00000251372|LILRA1;nc|ENSG00000131042|Q8N423-3|LILRB2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2	ENST00000495417.5_1_19:55105185-55110756:+|nuORF	ENST00000495417.5_1_19:55105185-55110756:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.36474609375	2	642.364579	1282.7146	-1.1506	-0.00073908	-1.7683	-0.0011359	-2.9188	-0.001875	642.3639567174044	110.02	1.5274	110.03	109.72	111.24	0.0060425					172	55	4	0	0	0	0.53935	1	11758	11758		53.351	3.8154	1	1394500			41888	2176	27947	27960	47606	47606					0.08455572445677717
PLRLTGPK	8	Unmodified	_PLRLTGPK_					0	0	0		ENST00000431446.7_1_X:135961581-135962880:-|nuORF	ENST00000431446.7_1_X:135961581-135962880:-|nuORF	ENST00000431446.7_1_X:135961581-135962880:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.2806396484375	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.79	1	40.794	40.294	41.294	0.0043983								0	0	0	0.30252	1	2615	2615		19.36	0	1				41889	11648	27948	27961	47607	47607					0.10438385376664883
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	445.6360778808594	3	445.635598	1333.88496	0.18227	8.1227E-05	0.74958	0.00033404	0.93185	0.00041527	445.63582798673895	37.822	1.4426	37.92	37.643	39.086	0.097851					200	47	5	0	0	0	0.84494	1	2187	2187		6.3209	0.31984	1	3162500	+		41890	20380	27949	27962	47608	47608					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.6361389160156	3	445.635598	1333.88496	-0.08769	-3.9078E-05	0.76804	0.00034227	0.68035	0.00030319	445.6358753524641	36.614	1.1516	36.896	36.681	37.833	0.28173					135	27	6	0	0	0	0.80593	1	2912	2912		10.104	3.4443	1	11171000	+		41891	20380	27949	27962	47609	47609					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.635986328125	3	445.635598	1333.88496	-0.63519	-0.00028306	1.146	0.0005107	0.5108	0.00022763	445.6360586466579	37.863	1.1296	38.176	37.864	38.994	0.31312					138	28	6	0	0	0	0.80813	4	3080	3056;3080;3092;3104		9.6461	6.3209	1	20399000	+		41892	20380	27949	27962	47610;47611;47612;47613	47611					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.6359558105469	3	445.635598	1333.88496	1.3928	0.00062067	-0.74884	-0.00033371	0.64393	0.00028696	445.6352024508616	36.513	1.0806	36.953	36.745	37.825	0.44043					121	25	6	0	0	0	0.80593	2	2905	2905;2917		10.104	0.45776	1	12493000	+		41893	20380	27949	27962	47614;47615	47614					0.2313771511521736
PLRPGGLPG	9	Unmodified	_PLRPGGLPG_					0	0	0		ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2574157714844	2	432.25852	862.502486	0.40609	0.00017553	-1.8282	-0.00079027	-1.4221	-0.00061473	432.2575947247643	68.412	1.5069	68.797	68.224	69.731	0.38482					60	35	2	0	0	0	0.67235	1	7517	7517		42.474	0	1	399210			41894	6290	27950	27963	47616	47616					0.06573525825513116
PLRPGGLPG	9	Unmodified	_PLRPGGLPG_					0	0	0		ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.25799560546875	2	432.25852	862.502486	0.095672	4.1355E-05	-1.4893	-0.00064377	-1.3936	-0.00060241	432.25767954187023	68.33	1.4604	68.877	68.284	69.744	0.54722					66	34	3	0	0	0	0.77546	1	7577	7577		31.955	5.1588	1	472160			41895	6290	27950	27963	47617	47617					0.06573525825513116
PLRPRKERKPR	11	Unmodified	_PLRPRKERKPR_					0	0	0			REV__ENSG00000169592|ENST00000563197|INO80E	REV__ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.3019714355469	3	478.303904	1431.88988	-1.7989	-0.00086042	-0.21	-0.00010045	-2.0089	-0.00096087	478.3036786471485	67.172	1.202	67.201	66.753	67.955	0.02858					107	52	3	0	0	0	0.75121	3	6377	6371;6377;6385		21.78	2.5177	1	286540	+		41896	21588	27951	27964	47618;47619;47620	47619					0.19121412030517604
PLRPRKERKPR	11	Unmodified	_PLRPRKERKPR_					0	0	0			REV__ENSG00000169592|ENST00000563197|INO80E	REV__ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.30194091796875	3	478.303904	1431.88988	-0.88095	-0.00042136	-1.4319	-0.00068487	-2.3128	-0.0011062	478.30312855267334	66.875	1.0299	67.008	66.517	67.547	0.13326					107	42	3	0	0	0	0.77803	2	5941	5941;5950		15.921	1.1418	1	324080	+		41897	21588	27951	27964	47621;47622	47621					0.19121412030517604
PLRPRKERKPR	11	Unmodified	_PLRPRKERKPR_					0	0	0			REV__ENSG00000169592|ENST00000563197|INO80E	REV__ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.3030090332031	3	478.303904	1431.88988	0.47685	0.00022808	-2.4226	-0.0011588	-1.9458	-0.00093068	478.3025280059543	66.964	1.0029	67.09	66.677	67.68	0.12649					108	40	3	0	0	0	0.80813	1	5960	5960		9.6461	0.43434	1	331170	+		41898	21588	27951	27964	47623	47623					0.19121412030517604
PLRPVALRAPA	11	Unmodified	_PLRPVALRAPA_					0	0	0			REV__ENST00000216039.9_1_22:39096389-39096641:-|nuORF	REV__ENST00000216039.9_1_22:39096389-39096641:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8657836914062	2	580.866757	1159.71896	-1.279	-0.00074291	-0.0093791	-5.448E-06	-1.2883	-0.00074836	580.866763008902	80.001	1.2284	80.417	79.742	80.97	0.41621					58	28	3	0	0	0	0.73893	1	9186	9186		24.519	0.31644	1	479940	+		41899	24121	27952	27965	47624	47624					0.14549081659220064
PLRPVALRAPA	11	Unmodified	_PLRPVALRAPA_					0	0	0			REV__ENST00000216039.9_1_22:39096389-39096641:-|nuORF	REV__ENST00000216039.9_1_22:39096389-39096641:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	580.866757	1159.71896	0.65918	0.0003829	-2.0443	-0.0011875	-1.3851	-0.00080458	580.8656785642352	79.879	0.56715	80.01	79.628	80.195	0.13086	-0.27065	-0.001334	NaN	24.519	36	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	131760	+		41900	24121	27952	27965							0.14549081659220064
PLRPVALRAPA	11	Unmodified	_PLRPVALRAPA_					0	0	0			REV__ENST00000216039.9_1_22:39096389-39096641:-|nuORF	REV__ENST00000216039.9_1_22:39096389-39096641:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	580.866757	1159.71896	0.69523	0.00040384	-2.6605	-0.0015454	-1.9653	-0.0011416	580.8653427759942	80.091	0.17007	80.232	80.188	80.359	0.14117	-0.048816	-0.0020498	NaN	24.519	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42607	+		41901	24121	27952	27965							0.14549081659220064
PLRPVALRAPA	11	Unmodified	_PLRPVALRAPA_					0	0	0			REV__ENST00000216039.9_1_22:39096389-39096641:-|nuORF	REV__ENST00000216039.9_1_22:39096389-39096641:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	580.866757	1159.71896	-1.279	-0.00074291	-0.0093791	-5.448E-06	-1.2883	-0.00074836	580.866763008902	80.001	1.2284	80.417	79.742	80.97	0.41621	0.13612	0.0010301	NaN	24.519	58	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	479940	+		41902	24121	27952	27965							0.14549081659220064
PLRPVALRAPA	11	Unmodified	_PLRPVALRAPA_					0	0	0			REV__ENST00000216039.9_1_22:39096389-39096641:-|nuORF	REV__ENST00000216039.9_1_22:39096389-39096641:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	580.866757	1159.71896	-0.64489	-0.00037459	-0.64091	-0.00037228	-1.2858	-0.00074687	580.8662957611734	79.937	1.187	80.464	79.848	81.035	0.52676	0.18335	0.00029641	NaN	24.519	51	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	515980	+		41903	24121	27952	27965							0.14549081659220064
PLRQLFKLMA	10	Unmodified	_PLRQLFKLMA_					0	0	0		ENSG00000060642|ENST00000674202|PIGV	ENSG00000060642|ENST00000674202|PIGV	ENSG00000060642|ENST00000674202|PIGV	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2478942871094	3	406.246005	1215.71618	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.8	1	112.77	112.27	113.27	-0.024811								0	0	0	0.45132	1	12470	12470		22.58	5.4129	1				41904	1065	27953	27966	47625	47625					0.11695490210058779
PLRQLFKLMA	10	Unmodified	_PLRQLFKLMA_					0	0	0		ENSG00000060642|ENST00000674202|PIGV	ENSG00000060642|ENST00000674202|PIGV	ENSG00000060642|ENST00000674202|PIGV	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2489929199219	3	406.246005	1215.71618	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.41	1	113.39	112.89	113.89	-0.024811								0	0	0	0.45132	1	12548	12548		17.468	1.4612	1				41905	1065	27953	27966	47626	47626					0.11695490210058779
PLRRARPPDS	10	Unmodified	_PLRRARPPDS_					0	0	0		nc|ENSG00000108375|Q68DV7-3|RNF43;nc|ENSG00000108375|Q68DV7-2|RNF43;ENSG00000108375|ENST00000407977|RNF43;nc|ENSG00000108375|Q68DV7-4|RNF43	nc|ENSG00000108375|Q68DV7-3|RNF43	nc|ENSG00000108375|Q68DV7-3|RNF43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8334350585938	2	582.833446	1163.65234	2.3168	0.0013503	-3.6678	-0.0021377	-1.3511	-0.00078746	582.8313275695042	94.548	3.2085	94.489	93.331	96.54	-0.059212					184	75	3	0	0	0	0.8608	1	10087	10087		34.173	1.3601	1	663000			41906	2402	27954	27967	47627	47627					0.07705846097314861
PLRRKLWQNYR	11	Unmodified	_PLRRKLWQNYR_					0	0	0		ENSG00000141569|ENST00000269383|TRIM65	ENSG00000141569|ENST00000269383|TRIM65	ENSG00000141569|ENST00000269383|TRIM65	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.6341857910156	3	510.631909	1528.8739	4.1352	0.0021116	2.4886	0.0012707	6.6238	0.0033823	510.96644639342924	104.18	2.2061	104.41	103.8	106.01	0.22783					165	53	5	0	0	0	0.81021	2	12712	12712;12744		9.2118	2.8909	1	454800			41907	4512	27955	27968	47628;47629	47628					0.1306170579364334
PLRRQKLPKV	10	Unmodified	_PLRRQKLPKV_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7669372558594	3	412.275063	1233.80336	-1.7889	-0.0007375	-3.5103	-0.0014472	-5.2992	-0.0021847	412.2733160976156	46.288	1.7705	46.288	45.502	47.273	0					100	47	3	0	0	0	0.37624	1	3408	3408		3.8434	0.22435	1	337050			41908	8822	27956	27969	47630	47630					0.19581032475957727
PLRRQKLPKV	10	Unmodified	_PLRRQKLPKV_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7671813964844	3	412.275063	1233.80336	-1.8481	-0.00076194	-2.3966	-0.00098805	-4.2447	-0.00175	412.2740619656246	42.458	0.82938	42.458	41.85	42.679	0					32	20	2	0	0	0	0.37624	1	2863	2863		7.0187	2.9358	1	65017			41909	8822	27956	27969	47631	47631					0.19581032475957727
PLRRQKLPKV	10	Unmodified	_PLRRQKLPKV_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2662658691406	3	412.275063	1233.80336	0.18148	7.4818E-05	-4.1681	-0.0017184	-3.9867	-0.0016436	412.27326537596963	39.552	0.71444	39.64	39.255	39.969	0.088371					36	18	3	0	0	0	0.37624	1	2456	2456		15.333	8.3144	1	42192			41910	8822	27956	27969	47632	47632					0.19581032475957727
PLRRQKLPKV	10	Unmodified	_PLRRQKLPKV_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.76654052734375	3	412.275063	1233.80336	-0.64492	-0.00026588	-3.7034	-0.0015268	-4.3483	-0.0017927	412.2735019848597	45.525	1.2411	46.42	45.964	47.205	0.89542					60	30	4	0	0	0	0.37624	1	4358	4358		7.0187	0	1	573190			41911	8822	27956	27969	47633	47633					0.19581032475957727
PLRRQKLPKV	10	Unmodified	_PLRRQKLPKV_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	412.275063	1233.80336	-0.90663	-0.00037378	-4.7346	-0.001952	-5.6412	-0.0023257	412.27286800993676	46.295	1.9389	46.266	45.627	47.565	-0.028782	-0.010657	-0.0006223	NaN	3.8434	104	49	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	829540			41912	8822	27956	27969							0.19581032475957727
PLRRQKLPKV	10	Unmodified	_PLRRQKLPKV_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	412.275063	1233.80336	0.083032	3.4232E-05	-4.6853	-0.0019316	-4.6022	-0.0018974	412.2730711995168	45.882	0.96785	46.353	45.847	46.815	0.47139	0.076258	-0.00056129	NaN	3.8434	58	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	646980			41913	8822	27956	27969							0.19581032475957727
PLRRRPVRRL	10	Unmodified	_PLRRRPVRRL_					0	0	0			REV__nc|ENSG00000229214|Q5T6M2|LINC00242	REV__nc|ENSG00000229214|Q5T6M2|LINC00242	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2922058105469	3	440.29334	1317.85819	0.37061	0.00016318	-2.5322	-0.0011149	-2.1616	-0.00095173	440.29198732058745	59.638	1.194	59.752	59.25	60.444	0.11396					105	36	4	0	0	0	0.88463	1	5144	5144		11.636	0.53916	1	260900	+		41914	30216	27957	27970	47634	47634					0.21197464067245164
PLRSKDLKRTV	11	Unmodified	_PLRSKDLKRTV_					0	0	0			REV__nc|ENSG00000166073|Q14439-3|GPR176	REV__nc|ENSG00000166073|Q14439-3|GPR176	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2726135253906	3	438.273499	1311.79867	0.73903	0.0003239	-2.0576	-0.00090178	-1.3185	-0.00057788	438.2725101796097	107.07	1.2292	107.16	106.69	107.92	0.091255					130	29	5	0	0	0	0.75457	1	11420	11420		21.032	0.19508	1	4759800	+		41915	30002	27958	27971	47635	47635					0.15524103542543344
PLRSSKKKKTK	11	Unmodified	_PLRSSKKKKTK_					0	0	0			REV__ENSG00000125686|ENST00000300651|MED1	REV__ENSG00000125686|ENST00000300651|MED1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.2862854003906	3	434.285628	1299.83505	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.728	1	57.698	57.198	58.198	-0.029865								0	0	0	0.56276	1	5337	5337		17.167	3.6588	1		+		41916	18658	27959	27972	47636	47636					0.19712980439248895
PLRVGVVC	8	Unmodified	_PLRVGVVC_					0	0	0		ENST00000360635.7_1_2:9563104-9563296:-|nuORF	ENST00000360635.7_1_2:9563104-9563296:-|nuORF	ENST00000360635.7_1_2:9563104-9563296:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75128173828125	2	421.749473	841.484393	2.0737	0.00087458	2.8713	0.001211	4.945	0.0020855	421.75059831811666	74.567	1.1366	74.612	73.884	75.021	0.04509					66	40	2	0	0	0	0.83466	1	7180	7180		23.037	1.3344	1	116630			41917	10452	27960	27973	47637	47637					0.057310675791541144
PLRVLFLMTK	10	Unmodified	_PLRVLFLMTK_					0	0	0		ENSG00000104814|ENST00000396857|MAP4K1;nc|ENSG00000104814|Q92918|MAP4K1	ENSG00000104814|ENST00000396857|MAP4K1	ENSG00000104814|ENST00000396857|MAP4K1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.91845703125	3	406.586138	1216.73659	-1.7908	-0.00072813	-3.4355	-0.0013968	-5.2263	-0.002125	406.5846406101276	111.69	0.38136	111.8	111.59	111.97	0.11118					29	11	3	0	0	0	0.86014	1	12019	12019		23.378	2.5408	1	6428000			41918	2149	27961	27974	47638	47638					0.13688660869865998
PLRVLFLMTK	10	Unmodified	_PLRVLFLMTK_					0	0	0		ENSG00000104814|ENST00000396857|MAP4K1;nc|ENSG00000104814|Q92918|MAP4K1	ENSG00000104814|ENST00000396857|MAP4K1	ENSG00000104814|ENST00000396857|MAP4K1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.5836486816406	3	406.586138	1216.73659	-1.7911	-0.00072824	-3.3218	-0.0013506	-5.1129	-0.0020788	406.5846515524058	112.19	0.31435	112.3	112.2	112.51	0.10638					30	11	3	0	0	0	0.86647	2	12109	12092;12109		28.577	7.487	1	4130800			41919	2149	27961	27974	47639;47640	47640					0.13688660869865998
PLSALKPI	8	Unmodified	_PLSALKPI_					0	0	0			REV__nc|ENSG00000178104|Q5VU43|PDE4DIP	REV__nc|ENSG00000178104|Q5VU43|PDE4DIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.77392578125	2	419.773471	837.53239	-0.61524	-0.00025826	4.1706	0.0017507	3.5554	0.0014924	419.77510623203386	52.301	1.7898	52.227	50.978	52.768	-0.074509					74	52	2	0	0	0	0.84341	1	4208	4208		24.203	2.2429	1	183680	+		41920	22254	27962	27975	47641	47641					0.10712464770847419
PLSALPDLLL	10	Unmodified	_PLSALPDLLL_					0	0	0			REV__ENST00000311604.7_1_11:1913083-1913311:+|nuORF	REV__ENST00000311604.7_1_11:1913083-1913311:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3251953125	2	526.323525	1050.6325	-0.67072	-0.00035302	3.1177	0.0016409	2.447	0.0012879	526.3250687277414	64.714	3.1276	64.752	62.47	65.598	0.037849					207	130	2	0	0	0	0.85694	1	5719	5719		21.96	1.4781	1	198930	+		41921	24909	27963	27976	47642	47642					0.10920657314022719
PLSDLSKMHD	10	Unmodified	_PLSDLSKMHD_					0	0	0			REV__nc|ENSG00000135903|P23760|PAX3	REV__nc|ENSG00000135903|P23760|PAX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.2784423828125	2	571.779156	1141.54376	0.13421	7.6737E-05	-2.5808	-0.0014757	-2.4466	-0.0013989	571.777651065585	55.822	0.33825	55.853	55.652	55.991	0.030838					14	8	2	0	0	0	0.80179	1	5026	5026		39.253	2.0937	1	64004	+		41922	19263	27964	27977	47643	47643					-0.02135125987979336
PLSFKPVTLHL	11	Unmodified	_PLSFKPVTLHL_					0	0	0			REV__nc|ENSG00000141441|Q9H706-2|GAREM1	REV__nc|ENSG00000141441|Q9H706-2|GAREM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.379638671875	2	626.376623	1250.73869	4.8484	0.0030369	0.02649	1.6593E-05	4.8748	0.0030535	626.376538751344	105.56	2.7242	105.75	104.85	107.57	0.18647					224	90	4	0	0	0	0.7342	1	12883	12883		25.574	1.0549	1	2877800	+		41923	19685	27965	27978	47644	47644					0.12335412879338037
PLSGLQDGDLA	11	Unmodified	_PLSGLQDGDLA_					0	0	0		ENST00000399409.7_1_14:24737997-24738150:-|nuORF	ENST00000399409.7_1_14:24737997-24738150:-|nuORF	ENST00000399409.7_1_14:24737997-24738150:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	542.8060913085938	2	543.277303	1084.54005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.423	1	71.423	70.923	71.923	0								0	0	0	0.56276	1	6372	6372		31.53	4.8369	1				41924	11203	27966	27979	47645	47645					0.001165275098173879
PLSGRRRRPTK	11	Unmodified	_PLSGRRRRPTK_					0	0	0		nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1;ENST00000542424.1_1_12:1005827-1009868:+|nuORF	nc|ENSG00000060237|Q9H4A3-5|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9395751953125	3	441.940855	1322.80073	0.34626	0.00015303	-2.8153	-0.0012442	-2.469	-0.0010912	441.9394808074078	56.501	1.1083	56.601	56.467	57.576	0.099186					113	51	3	0	0	0	0.75779	1	4830	4830		20.315	0.68808	1	679940			41925	14760	27967	27980	47646	47646					0.15224577071035128
PLSGVKDR	8	Unmodified	_PLSGVKDR_					0	0	0		nc|ENSG00000159588|Q96LX7-3|CCDC17;nc|ENSG00000159588|Q96LX7-2|CCDC17;nc|ENSG00000159588|Q96LX7-5|CCDC17;ENSG00000159588|ENST00000528266|CCDC17	nc|ENSG00000159588|Q96LX7-3|CCDC17	nc|ENSG00000159588|Q96LX7-3|CCDC17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.2550048828125	2	436.253434	870.492316	2.1857	0.00095352	1.2941	0.00056457	3.4798	0.0015181	436.2538705634068	114.35	2.7328	114.38	114.11	116.84	0.026459					117	82	2	0	0	0	0.90465	1	12672	12672		40.573	1.7665	1	78531			41926	5536	27968	27981	47647	47647					0.051889181002820806
PLSIALLLS	9	Unmodified	_PLSIALLLS_					0	0	0			REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.79986572265625	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	1	3384	3384		23.042	0	1	1294000	+		41927	28798	27969	27982	47648	47648					0.11905003113804469
PLSISKSLTM	10	Unmodified	_PLSISKSLTM_					0	0	0			REV__ENSG00000206052|ENST00000382713|DOK6	REV__ENSG00000206052|ENST00000382713|DOK6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.806396484375	2	538.804642	1075.59473	2.2674	0.0012217	1.5354	0.00082726	3.8027	0.0020489	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.86047	1	9463	9463		23.523	1.5628	1	835060	+		41928	23584	27970	27983	47649	47649					0.05995823056855443
PLSKQPLSF	9	Unmodified	_PLSKQPLSF_					0	0	0			REV__ENSG00000135912|ENST00000392102|TTLL4	REV__ENSG00000135912|ENST00000392102|TTLL4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7735595703125	2	508.792392	1015.57023	0.68404	0.00034803	-1.8549	-0.00094376	-1.1709	-0.00059572	508.79137082360114	75.127	0.93166	75.692	75.249	76.18	0.56458					44	22	3	0	0	0	0.20789	1	8486	8486		58.782	9.3404	1	350590	+		41929	19265	27971	27984	47650	47650					0.06306930965649826
PLSKRKYPALL	11	Unmodified	_PLSKRKYPALL_					0	0	0		ENST00000521033.5_1_5:160061154-160212677:-|nuORF;nc|ENSG00000118322|O94823-3|ATP10B;nc|ENSG00000118322|O94823-2|ATP10B	ENST00000521033.5_1_5:160061154-160212677:-|nuORF	ENST00000521033.5_1_5:160061154-160212677:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4057006835938	2	643.403173	1284.79179	0.94326	0.0006069	3.082	0.001983	4.0253	0.0025899	643.4049918963857	105.64	1.1738	105.75	104.98	106.16	0.10766					144	29	6	0	0	0	0.69248	1	11274	11274		32.751	1.2207	1	23114000			41930	13166	27972	27985	47651	47651					0.16078790662004394
PLSKVKSRWVI	11	Unmodified	_PLSKVKSRWVI_					0	0	0			REV__ENST00000216281.12_1_14:102547440-102547575:-|nuORF	REV__ENST00000216281.12_1_14:102547440-102547575:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.27337646484375	3	438.27484	1311.80269	-1.4634	-0.00064136	-2.9517	-0.0012937	-4.4151	-0.001935	438.2734550831373	106.96	1.4325	107.1	106.6	108.03	0.14105					150	35	5	0	0	0	0.75121	1	11403	11403		21.78	0.74819	1	5372900	+		41931	24129	27973	27986	47652	47652					0.15926193036261793
PLSLQLVL	8	Unmodified	_PLSLQLVL_					0	0	0		ENST00000574957.1_1_16:3075861-3075963:+|nuORF	ENST00000574957.1_1_16:3075861-3075963:+|nuORF	ENST00000574957.1_1_16:3075861-3075963:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7878723144531	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.80706	2	2985	2961;2985		21.702	0	1	12471000			41932	14041	27974	27987	47653;47654	47654					0.11308733942325944
PLSLTLLLS	9	Unmodified	_PLSLTLLLS_					0	0	0		ENST00000480384.1_1_6:31827498-31827900:-|nuORF	ENST00000480384.1_1_6:31827498-31827900:-|nuORF	ENST00000480384.1_1_6:31827498-31827900:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8064270019531	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.218	1	39.165	38.665	39.665	-0.052731								0	0	0	0.33676	1	2384	2384		18.324	0	1				41933	12434	27975	27988	47655	47655					0.11580985768239316
PLSLWLLLLLG	11	Unmodified	_PLSLWLLLLLG_					0	0	0			REV__ENST00000400968.6_1_1:193028645-193038169:+|nuORF	REV__ENST00000400968.6_1_1:193028645-193038169:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.26580810546875	3	413.268804	1236.78458	0.21308	8.806E-05	-1.6446	-0.00067965	-1.4315	-0.00059159	413.2670936743631	41.866	2.062	41.835	40.73	42.792	-0.030991					122	53	4	0	0	0	0.69248	1	3006	3006		32.751	7.6245	1	252870	+		41934	26254	27976	27989	47656	47656					0.17566058061561307
PLSNRPRPPAS	11	Unmodified	_PLSNRPRPPAS_					0	0	0			REV__ENST00000507952.1_1_10:75490350-75491018:+|nuORF	REV__ENST00000507952.1_1_10:75490350-75491018:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3330688476562	2	596.333279	1190.652	-0.30561	-0.00018224	-0.32296	-0.00019259	-0.62857	-0.00037483	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.53361	1	9684	9684		49.536	10.73	1	740920	+		41935	27915	27977	27990	47657	47657					0.06430426377460208
PLSPPRAAA	9	Unmodified	_PLSPPRAAA_					0	0	0			REV__ENST00000604081.1_1_12:54388423-54388660:-|nuORF	REV__ENST00000604081.1_1_12:54388423-54388660:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2554016113281	2	440.255977	878.497401	0.40701	0.00017919	-1.6183	-0.00071247	-1.2113	-0.00053328	440.25507557275375	63.556	1.6285	64.111	63.598	65.226	0.55449					91	38	4	0	0	0	0.7932	1	6834	6834		24.203	1.1603	1	1465000	+		41936	29353	27978	27991	47658	47658					0.053292219628815474
PLSPRVLCLPP	11	Unmodified	_PLSPRVLCLPP_					0	0	0			REV__ENST00000421462.5_1_2:159314085-159314565:+|nuORF	REV__ENST00000421462.5_1_2:159314085-159314565:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3468627929688	2	596.349551	1190.68455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.148	1	69.148	68.648	69.648	0								0	0	0	0.56276	1	6157	6157		20.947	0.95016	1		+		41937	26497	27979	27992	47659	47659					0.09683497456103396
PLSPTLGQG	9	Unmodified	_PLSPTLGQG_					0	0	0		ENST00000598074.1_1_19:47226248-47228085:-|nuORF	ENST00000598074.1_1_19:47226248-47228085:-|nuORF	ENST00000598074.1_1_19:47226248-47228085:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2356262207031	2	435.239993	868.465432	0.082196	3.5775E-05	0.37718	0.00016417	0.45938	0.00019994	435.23995767392597	28.245	0.56056	28.356	28.067	28.627	0.11117					54	29	2	0	0	0	0.62081	1	1146	1146		45.952	1.8352	1	145700			41938	14366	27980	27993	47660	47660					0.025938094890989305
PLSQMLGR	8	Unmodified	_PLSQMLGR_					0	0	0			REV__nc|ENSG00000165985|Q5VWW1-3|C1QL3	REV__nc|ENSG00000165985|Q5VWW1-3|C1QL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.24932861328125	2	451.249837	900.485122	0.4368	0.00019711	-2.3688	-0.0010689	-1.932	-0.00087182	451.2486012382637	65.524	1.1913	65.65	65.09	66.281	0.12532					110	62	3	0	0	0	0.87064	1	5789	5789		29.15	1.2673	1	1138900	+		41939	21239	27981	27994	47661	47661					0.0308986222820522
PLSRLKIYYL	10	Unmodified	_PLSRLKIYYL_					0	0	0		ENST00000374199.8_1_9:116054008-116054197:+|nuORF	ENST00000374199.8_1_9:116054008-116054197:+|nuORF	ENST00000374199.8_1_9:116054008-116054197:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.92913818359375	3	422.592058	1264.75434	0.25981	0.00010979	1.8977	0.00080196	2.1575	0.00091175	422.5926995986668	51.927	1.8648	52.35	51.024	52.889	0.42348					93	44	3	0	0	0	0.90881	1	5210	5210		7.8045	0.78583	1	995380			41940	10767	27982	27995	47662	47662					0.13255699396358978
PLSRPSARG	9	Unmodified	_PLSRPSARG_					0	0	0		ENST00000343217.6_1_2:241499837-241500047:+|nuORF	ENST00000343217.6_1_2:241499837-241500047:+|nuORF	ENST00000343217.6_1_2:241499837-241500047:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.769775390625	2	470.769783	939.525013	-0.85112	-0.00040068	-0.72759	-0.00034253	-1.5787	-0.00074321	470.7693717184576	51.01	1.4748	51.018	50.607	52.082	0.0077438					99	42	3	0	0	0	0.75725	1	4439	4439		36.447	5.9431	1	770790			41941	10278	27983	27996	47663	47663					0.052831252231385406
PLSRWKTRGPR	11	Unmodified	_PLSRWKTRGPR_					0	0	0		ENST00000342963.2_1_7:5459517-5460286:+|nuORF	ENST00000342963.2_1_7:5459517-5460286:+|nuORF	ENST00000342963.2_1_7:5459517-5460286:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.93255615234375	3	451.933588	1352.77894	-1.2099	-0.00054677	-0.78569	-0.00035508	-1.9955	-0.00090185	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.77205	1	10582	10582		17.167	0	1	1176100			41942	10269	27984	27997	47664	47664					0.11665772322407975
PLSSNYLRYAQ	11	Unmodified	_PLSSNYLRYAQ_					0	0	0			REV__ENSG00000188897|ENST00000696174|unknown	REV__ENSG00000188897|ENST00000696174|unknown	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2287292480469	3	437.894577	1310.6619	0.33171	0.00014525	-2.8865	-0.001264	-2.5548	-0.0011187	437.8932483872008	30.577	0.56735	30.581	30.272	30.84	0.0037212					21	12	2	0	0	0	0.67041	1	2027	2027		36.318	1.1394	1	253460	+		41943	23042	27985	27998	47665	47665					0.018995695921830702
PLSTLGLRPKW	11	Unmodified	_PLSTLGLRPKW_					0	0	0			REV__ENST00000269033.7_1_17:27955686-27956034:-|nuORF	REV__ENST00000269033.7_1_17:27955686-27956034:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3766479492188	2	634.379697	1266.74484	-1.1773	-0.00074688	-3.1342	-0.0019883	-4.3115	-0.0027352	634.3774291341157	112.05	1.1748	112.03	111.8	112.98	-0.019882					84	36	4	0	0	0	0.65746	1	11980	11980		37.812	2.6595	1	22589000	+		41944	24518	27986	27999	47666	47666					0.12213931110841258
PLSTLTLK	8	Unmodified	_PLSTLTLK_					0	0	0		nc|ENSG00000174501|Q5JPF3|ANKRD36C;ENSG00000174501|ENST00000295246|ANKRD36C;ENSG00000135976|ENST00000420699|ANKRD36	nc|ENSG00000174501|Q5JPF3|ANKRD36C	nc|ENSG00000174501|Q5JPF3|ANKRD36C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77423095703125	2	436.776211	871.537869	-1.6314	-0.00071254	-4.1235	-0.001801	-5.7548	-0.0025136	436.7743489325011	26.574	0.4584	26.641	26.356	26.815	0.066877					33	21	2	0	0	0	0.79929	1	1010	1010		18.324	4.5491	1	119400			41945	6941	27987	28000	47667	47667					0.0969614356265538
PLSTQPIL	8	Unmodified	_PLSTQPIL_					0	0	0		ENST00000549336.5_1_12:48238330-48238510:-|nuORF	ENST00000549336.5_1_12:48238330-48238510:-|nuORF	ENST00000549336.5_1_12:48238330-48238510:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.75982666015625	2	434.760561	867.506569	-0.16641	-7.2351E-05	-2.965	-0.0012891	-3.1314	-0.0013614	434.75945112998903	87.697	3.829	87.765	85.858	89.687	0.067711					171	89	4	0	0	0	0.884	1	8886	8886		33.516	0	1	1344400			41946	13633	27988	28001	47668	47668					0.06751570528570028
PLSVHRVN	8	Unmodified	_PLSVHRVN_					0	0	0		ENST00000481804.5_1_16:775346-776019:-|nuORF	ENST00000481804.5_1_16:775346-776019:-|nuORF	ENST00000481804.5_1_16:775346-776019:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.26580810546875	2	461.266876	920.519199	0.74903	0.0003455	-3.8122	-0.0017584	-3.0632	-0.0014129	461.2650179304886	92.74	1.2179	93.186	92.819	94.037	0.44661					57	28	3	0	0	0	0.87479	1	11024	11024		30.504	1.3541	1	317280			41947	12471	27989	28002	47669	47669					0.0557602671146924
PLSVLIAGI	9	Unmodified	_PLSVLIAGI_					0	0	0			REV__ENSG00000162104|ENST00000294016|ADCY9	REV__ENSG00000162104|ENST00000294016|ADCY9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7872314453125	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.7932	1	2887	2887		26.796	7.4361	1	10215000	+		41948	20795	27990	28003	47670	47670					0.11308733942325944
PLTALSRWY	9	Unmodified	_PLTALSRWY_					0	0	0		ENSG00000198133|ENST00000554480|TMEM229B	ENSG00000198133|ENST00000554480|TMEM229B	ENSG00000198133|ENST00000554480|TMEM229B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8026123046875	2	553.803291	1105.59203	0.4171	0.00023099	-0.43156	-0.000239	-0.014457	-8.0061E-06	553.8029689460955	67.918	0.87567	68.303	67.946	68.821	0.38483					46	20	3	0	0	0	0.64922	1	7464	7464		44.117	4.864	1	445130			41949	8243	27991	28004	47671	47671					0.0434573571421879
PLTIEQKEP	9	Unmodified	_PLTIEQKEP_					0	0	0			REV__ENSG00000167447|ENST00000300917|SMG8	REV__ENSG00000167447|ENST00000300917|SMG8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3106689453125	2	527.792589	1053.57063	0.30001	0.00015834	0.26107	0.00013779	0.56108	0.00029614	527.7928019381372	80.892	0.48994	81.313	81.06	81.55	0.4215					18	11	2	0	0	0	0.20789	1	9285	9285		47.657	0	1	105450	+		41950	21386	27992	28005	47672	47672					0.04598305894865007
PLTINRRSP	9	Unmodified	_PLTINRRSP_					0	0	0			REV__ENSG00000137501|ENST00000359152|SYTL2	REV__ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.310546875	2	527.311815	1052.60908	0.22805	0.00012025	-1.4606	-0.00077019	-1.2325	-0.00064993	527.3109109335428	80.785	0.86409	81.312	80.907	81.771	0.52676					54	20	3	0	0	0	0.71772	1	9360	9360		39.253	2.8061	1	2180000	+		41951	19388	27993	28006	47673	47673					0.08487656320039605
PLTIVLDLQ	9	Unmodified	_PLTIVLDLQ_					0	0	0		ENST00000558657.1_1_15:50087131-50087983:+|nuORF	ENST00000558657.1_1_15:50087131-50087983:+|nuORF	ENST00000558657.1_1_15:50087131-50087983:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.284912109375	2	506.307875	1010.6012	0.33483	0.00016952	2.123	0.0010749	2.4578	0.0012444	506.30880812503	54.204	1.0049	54.61	54.07	55.075	0.40663					33	23	2	0	0	0	0.20789	1	5533	5533		44.117	0	1	155670			41952	13791	27994	28007	47674	47674					0.0963208427989457
PLTIWLPFVIP	11	Unmodified	_PLTIWLPFVIP_					0	0	0			REV__nc|ENSG00000155886|Q9UI40-2|SLC24A2	REV__nc|ENSG00000155886|Q9UI40-2|SLC24A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3923950195312	2	648.391742	1294.76893	-1.1411	-0.00073988	2.087	0.0013532	0.94594	0.00061334	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.78658	1	12916	12916		14.137	1.9304	1	2297700	+		41953	20451	27995	28008	47675	47675					0.13333771544512274
PLTLSPSLFY	10	Unmodified	_PLTLSPSLFY_					0	0	0			REV__ENST00000533762.5_3_1:26149812-26150235:+|nuORF	REV__ENST00000533762.5_3_1:26149812-26150235:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.31396484375	2	569.313158	1136.61176	-1.0206	-0.00058106	-2.3658	-0.0013469	-3.3864	-0.0019279	569.3117125739304	38.438	0.6608	38.388	38.072	38.733	-0.050369					35	14	3	0	0	0	0.71042	1	2711	2711		44.117	1.7207	1	185860	+		41954	28356	27996	28009	47676	47676					0.04892066934326067
PLTPLPRTPE	10	Unmodified	_PLTPLPRTPE_					0	0	0			REV__ENSG00000125966|ENST00000246186|MMP24	REV__ENSG00000125966|ENST00000246186|MMP24	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3409423828125	2	560.821681	1119.62881	0.76806	0.00043074	-4.0617	-0.0022779	-3.2937	-0.0018472	560.8194107930005	90.347	2.7025	90.501	88.725	91.427	0.15388					124	64	3	0	0	0	0.37624	1	8903	8903		25.574	4.6271	1	352770	+		41955	18686	27997	28010	47677	47677					0.07377987540144204
PLTPRPAGLV	10	Unmodified	_PLTPRPAGLV_					0	0	0		ENST00000587672.5_1_19:3015738-3019446:-|nuORF;nc|ENSG00000065717|Q04725-3|TLE2;ENSG00000065717|ENST00000262953|TLE2	ENST00000587672.5_1_19:3015738-3019446:-|nuORF	ENST00000587672.5_1_19:3015738-3019446:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8122863769531	2	510.813659	1019.61277	2.0738	0.0010593	-3.4035	-0.0017386	-1.3297	-0.00067922	510.811728357041	106.1	0.82207	106.22	105.9	106.72	0.12742					79	35	3	0	0	0	0.4892	1	12941	12941		56.721	10.749	1	1055000			41956	1140	27998	28011	47678	47678					0.10374326093904074
PLTSKKKEST	10	Unmodified	_PLTSKKKEST_					0	0	0			REV__ENSG00000171843|ENST00000380338|MLLT3	REV__ENSG00000171843|ENST00000380338|MLLT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.8239135742188	2	559.824421	1117.63429	1.1597	0.00064923	0.047298	2.6479E-05	1.207	0.00067571	559.8242610505523	18.455	0.32746	17.978	17.843	18.171	-0.47694					18	6	4	0	0	0	0.86218	1	393	393		32.812	6.1195	1	137750	+		41957	21776	27999	28012	47679	47679					0.08017666331966211
PLTSRFNKS	9	Unmodified	_PLTSRFNKS_					0	0	0			REV__ENST00000205386.8_1_7:107703372-107706232:-|nuORF	REV__ENST00000205386.8_1_7:107703372-107706232:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8051147460938	2	525.290548	1048.56654	1.0763	0.00056536	-1.5405	-0.0008092	-0.4642	-0.00024384	525.2896521100436	35.563	0.87522	35.81	35.281	36.156	0.2477					28	22	2	0	0	0	0.20789	1	2716	2716		45.952	15.448	1	248480	+		41958	24104	28000	28013	47680	47680					0.044202611917853574
PLTTRVPRVED	11	Unmodified	_PLTTRVPRVED_					0	0	0		ENST00000564965.5_2_16:50321972-50322137:+|nuORF	ENST00000564965.5_2_16:50321972-50322137:+|nuORF	ENST00000564965.5_2_16:50321972-50322137:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8594970703125	2	641.859326	1281.7041	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.8	1	117.88	117.38	118.38	0.087753								0	0	0	0.56276	1	12454	12454		47.657	8.4045	1				41959	13899	28001	28014	47681	47681					0.07451545000549231
PLTTSSLVL	9	Unmodified	_PLTTSSLVL_					0	0	0			REV__ENSG00000196778|ENST00000641528|OR52K1	REV__ENSG00000196778|ENST00000641528|OR52K1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77740478515625	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.475	1	79.606	79.106	80.106	0.13086								0	0	0	0.2969	1	7538	7538		31.955	0	1		+		41960	23173	28002	28015	47682	47682					0.07575822354453976
PLTVLSLLG	9	Unmodified	_PLTVLSLLG_					0	0	0		nc|ENSG00000103197|P49815-8|TSC2;ENST00000461648.2_1_16:2098014-2103834:+|nuORF	nc|ENSG00000103197|P49815-8|TSC2	nc|ENSG00000103197|P49815-8|TSC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7930908203125	2	456.791861	911.569169	-1.1724	-0.00053555	3.9802	0.0018181	2.8078	0.0012826	456.7935742947897	38.88	1.6337	38.833	37.942	39.576	-0.047001					120	37	4	0	0	0	0.76996	1	2745	2745		33.516	0	1	2323700			41961	12028	28003	28016	47683	47683					0.1098471659677216
PLTVLSLLG	9	Unmodified	_PLTVLSLLG_					0	0	0		nc|ENSG00000103197|P49815-8|TSC2;ENST00000461648.2_1_16:2098014-2103834:+|nuORF	nc|ENSG00000103197|P49815-8|TSC2	nc|ENSG00000103197|P49815-8|TSC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7930908203125	2	456.791861	911.569169	-0.0055701	-2.5444E-06	2.9863	0.0013641	2.9807	0.0013616	456.7931079883192	38.776	1.3461	38.723	38.257	39.603	-0.052731					134	39	4	0	0	0	0.76996	2	2304	2304;2313		33.516	0	1	1653300			41962	12028	28003	28016	47684;47685	47684					0.1098471659677216
PLVAKHPA	8	Unmodified	_PLVAKHPA_					0	0	0			REV__ENST00000311268.7_1_12:6930714-6930912:+|nuORF	REV__ENST00000311268.7_1_12:6930714-6930912:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	416.7546691894531	2	416.755613	831.496673	-1.8373	-0.00076571	0.26309	0.00010964	-1.5742	-0.00065607	416.7557703392063	69.009	0.92305	69.144	68.682	69.606	0.13521					98	39	4	0	0	0	0.90024	1	6227	6227		39.021	1.993	1	1065300	+		41963	24902	28004	28017	47686	47686					0.07418427313848497
PLVAPFSELL	10	Unmodified	_PLVAPFSELL_					0	0	0			REV__ENSG00000176542|ENST00000316407|USF3	REV__ENSG00000176542|ENST00000316407|USF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.7946166992188	2	543.3157	1084.61685	-0.29949	-0.00016272	-0.67876	-0.00036878	-0.97825	-0.0005315	543.8169661120304	66.129	0.21649	66.682	66.604	66.821	0.5526					7	5	2	0	0	0	0.37624	1	7219	7219		17.365	5.8539	1	100330	+		41964	22133	28005	28018	47687	47687					0.07792370796960313
PLVARFAGVP	10	Unmodified	_PLVARFAGVP_					0	0	0			REV__nc|ENSG00000068078|P22607-4|FGFR3	REV__nc|ENSG00000068078|P22607-4|FGFR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.810791015625	2	513.808377	1025.6022	-0.052006	-2.6721E-05	-0.13091	-6.7263E-05	-0.18292	-9.3984E-05	513.80813181887	66.806	0.42136	66.822	66.616	67.037	0.016197					32	19	2	0	0	0	0.81018	1	6265	6265		38.806	3.6054	1	91203	+		41965	29704	28006	28019	47688	47688					0.09042343439477918
PLVARRKS	8	Unmodified	_PLVARRKS_					0	0	0			REV__nc|ENSG00000291071|Q05BU3|FAM86JP	REV__nc|ENSG00000291071|Q05BU3|FAM86JP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8005065917969	2	463.798343	925.582134	0.28206	0.00013082	4.2188	0.0019567	4.5009	0.0020875	463.8001612881591	41.523	1.5134	41.492	41.236	42.75	-0.030991					87	37	3	0	0	0	0.87479	1	3106	3106		30.504	4.9296	1	527400	+		41966	30300	28007	28020	47689	47689					0.11636592499519338
PLVGWVLV	8	Unmodified	_PLVGWVLV_					0	0	0			REV__ENSG00000140323|ENST00000267889|DISP2	REV__ENSG00000140323|ENST00000267889|DISP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7880554199219	2	441.776014	881.537475	-0.16011	-7.0734E-05	1.6941	0.00074842	1.534	0.00067769	441.77666317189795	41.817	0.1654	41.772	41.71	41.876	-0.045467					5	3	2	0	0	0	0.4196	1	2768	2768		10.185	5.8685	1	76049	+		41967	19606	28008	28021	47690	47690					0.09196768633455576
PLVGYAINLAL	11	Unmodified	_PLVGYAINLAL_					0	0	0			REV__nc|ENSG00000136404|Q9BZW5-2|TM6SF1	REV__nc|ENSG00000136404|Q9BZW5-2|TM6SF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.340576171875	2	572.342249	1142.66995	0.5725	0.00032767	-4.415	-0.0025269	-3.8425	-0.0021992	572.3396541914032	101.39	0.82917	101.6	101.2	102.03	0.2058					35	19	2	0	0	0	0.71452	1	10660	10660		29.15	1.0681	1	407040	+		41968	19308	28009	28022	47691	47691					0.10431748579617306
PLVHCVRLLSA	11	Unmodified	_PLVHCVRLLSA_					0	0	0		ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF	ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.355712890625	2	604.352625	1206.6907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.416	1	82.561	82.061	83.061	0.1455								0	0	0	0.56276	1	7940	7940		31.53	3.6476	1				41969	8159	28010	28023	47692	47692					0.09562015687629355
PLVHWISITK	10	Unmodified	_PLVHWISITK_					0	0	0			REV__ENSG00000197442|ENST00000359015|MAP3K5	REV__ENSG00000197442|ENST00000359015|MAP3K5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.85546875	2	597.355691	1192.69683	2.4166	0.0014436	-2.8752	-0.0017175	-0.45857	-0.00027393	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.86348	1	9902	9902		31.53	2.3598	1	8047600	+		41970	23231	28011	28024	47693	47693					0.10818857190793096
PLVHWISITK	10	Unmodified	_PLVHWISITK_					0	0	0			REV__ENSG00000197442|ENST00000359015|MAP3K5	REV__ENSG00000197442|ENST00000359015|MAP3K5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3568725585938	2	597.355691	1192.69683	-0.84393	-0.00050413	1.3726	0.00081991	0.52864	0.00031578	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.85694	1	11027	11027		21.96	3.6355	1	1407500	+		41971	23231	28011	28024	47694	47694					0.10818857190793096
PLVIMLIL	8	Unmodified	_PLVIMLIL_					0	0	0		nc|ENSG00000074370|Q93084-4|ATP2A3;ENSG00000074370|ENST00000397041|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3	nc|ENSG00000074370|Q93084-4|ATP2A3	nc|ENSG00000074370|Q93084-4|ATP2A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2807312011719	2	456.30355	910.592547	0.052687	2.4041E-05	2.9451	0.0013439	2.9978	0.0013679	456.30597064396596	19.561	0.22816	18.932	18.847	19.075	-0.62961					6	4	2	0	0	0	0.4196	1	544	544		10.185	0	1	10494			41972	1307	28012	28025	47695	47695					0.13367439109742918
PLVLLVRRRK	10	Unmodified	_PLVLLVRRRK_					0	0	0			REV__ENSG00000230358|ENST00000424157|SPDYE21	REV__ENSG00000230358|ENST00000424157|SPDYE21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.4315795898438	2	625.432599	1248.85064	2.9227	0.0018279	-4.3296	-0.0027079	-1.4069	-0.00087995	625.429727159543	108.86	0.68909	108.83	108.52	109.21	-0.029381					65	29	3	0	0	0	0.90957	1	12099	12099		7.6903	4.2803	1	3045400	+		41973	23756	28013	28026	47696	47696					0.23617311746966152
PLVLSSAPLA	10	Unmodified	_PLVLSSAPLA_					0	0	0			REV__ENSG00000112787|ENST00000680143|FBRSL1	REV__ENSG00000112787|ENST00000680143|FBRSL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.296630859375	2	484.294768	966.574983	0.49585	0.00024014	0.2984	0.00014452	0.79425	0.00038465	484.29481723795845	32.602	0.67791	32.813	32.593	33.271	0.21168					26	15	2	0	0	0	0.37624	1	2291	2291		42.396	19.354	1	213970	+		41974	17966	28014	28027	47697	47697					0.09035815108427414
PLVLVTPPRCL	11	Unmodified	_PLVLVTPPRCL_					0	0	0		nc|ENSG00000080854|Q9UPX0|IGSF9B;ENSG00000080854|ENST00000533871|IGSF9B	nc|ENSG00000080854|Q9UPX0|IGSF9B	nc|ENSG00000080854|Q9UPX0|IGSF9B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3729248046875	2	604.365201	1206.71585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.81	1	117.83	117.33	118.33	0.026466								0	0	0	0.56276	1	12952	12952		10.265	0	1				41975	1455	28015	28028	47698	47698					0.12076070490184065
PLVMLDRW	8	Unmodified	_PLVMLDRW_					0	0	0		ENST00000480809.5_1_3:185925300-186038248:-|nuORF;nc|ENSG00000058866|P49619-3|DGKG;nc|ENSG00000058866|P49619-2|DGKG;ENSG00000058866|ENST00000265022|DGKG	ENST00000480809.5_1_3:185925300-186038248:-|nuORF	ENST00000480809.5_1_3:185925300-186038248:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.2807006835938	2	515.281137	1028.54772	-0.036562	-1.884E-05	3.2511	0.0016752	3.2146	0.0016564	515.282383673009	17.396	0.15215	17.317	17.221	17.373	-0.079056					12	6	2	0	0	0	0.83466	1	206	206		23.037	2.0898	1	32007			41976	1049	28016	28029	47699	47699					0.03459008296385946
PLVMLDRW	8	Unmodified	_PLVMLDRW_					0	0	0		ENST00000480809.5_1_3:185925300-186038248:-|nuORF;nc|ENSG00000058866|P49619-3|DGKG;nc|ENSG00000058866|P49619-2|DGKG;ENSG00000058866|ENST00000265022|DGKG	ENST00000480809.5_1_3:185925300-186038248:-|nuORF	ENST00000480809.5_1_3:185925300-186038248:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	515.281137	1028.54772	0.55545	0.00028621	2.1836	0.0011252	2.7391	0.0014114	515.2819949622003	17.383	0.23536	17.3	17.196	17.431	-0.0821	-0.0083608	-0.00044016	NaN	23.037	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28765			41977	1049	28016	28029							0.03459008296385946
PLVMNVVK	8	Unmodified	_PLVMNVVK_					0	0	0			REV__ENSG00000186300|ENST00000334241|ZNF555	REV__ENSG00000186300|ENST00000334241|ZNF555	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7548828125	2	450.272781	898.531009	0.32417	0.00014597	4.0049	0.0018033	4.3291	0.0019493	450.2745174446242	81.021	1.0123	80.961	80.42	81.433	-0.059692					44	23	2	0	0	0	0.4196	1	8215	8215		38.806	5.2906	1	116060	+		41978	22841	28017	28030	47700	47700					0.07768507410446546
PLVNFKSY	8	Unmodified	_PLVNFKSY_					0	0	0		ENST00000222584.7_1_7:21469183-21469285:+|nuORF	ENST00000222584.7_1_7:21469183-21469285:+|nuORF	ENST00000222584.7_1_7:21469183-21469285:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2391662597656	2	484.26601	966.517468	-0.54245	-0.00026269	-1.9069	-0.00092345	-2.4493	-0.0011861	484.2652787094153	84.851	0.59507	85.298	84.952	85.547	0.44736					22	14	2	0	0	0	0.4196	1	9883	9883		60.294	0	1	185690			41979	9178	28018	28031	47701	47701					0.03286972902844809
PLVNISLL	8	Unmodified	_PLVNISLL_					0	0	0		ENSG00000111670|ENST00000299314|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7771911621094	2	434.778754	867.542954	-0.14252	-6.1964E-05	3.501	0.0015222	3.3585	0.0014602	434.78017454908985	35.066	1.262	35.054	34.849	36.111	-0.012203					110	29	4	0	0	0	0.86791	1	2265	2265		28.254	0	1	2804500			41980	2599	28019	28032	47702	47702					0.10388447425293634
PLVNISLL	8	Unmodified	_PLVNISLL_					0	0	0		ENSG00000111670|ENST00000299314|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	ENSG00000111670|ENST00000299314|GNPTAB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7782897949219	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.884	1	2281	2281		33.516	1.5607	1	3951300			41981	2599	28019	28032	47703	47703					0.10388447425293634
PLVNLCDGH	9	Unmodified	_PLVNLCDGH_					0	0	0		ENSG00000154646|ENST00000284885|TMPRSS15	ENSG00000154646|ENST00000284885|TMPRSS15	ENSG00000154646|ENST00000284885|TMPRSS15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2362976074219	2	484.236927	966.459301	-0.10809	-5.2342E-05	-2.7708	-0.0013417	-2.8789	-0.0013941	484.2359966972615	84.849	1.21	85.289	84.903	86.113	0.43967					128	29	6	0	0	0	0.19953	1	9871	9871		73.975	4.8818	1	48653000			41982	5287	28020	28033	47704	47704					-0.025270320140862168
PLVNLCDGH	9	Unmodified	_PLVNLCDGH_					0	0	0		ENSG00000154646|ENST00000284885|TMPRSS15	ENSG00000154646|ENST00000284885|TMPRSS15	ENSG00000154646|ENST00000284885|TMPRSS15	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	484.236927	966.459301	0.89404	0.00043293	-2.6433	-0.00128	-1.7493	-0.00084706	484.23564836465897	85.371	0.51987	85.299	84.977	85.496	-0.07196	0.086158	-0.0010362	NaN	73.975	43	11	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1266900			41983	5287	28020	28033							-0.025270320140862168
PLVREADSATG	11	Unmodified	_PLVREADSATG_					0	0	0			REV__ENSG00000079841|ENST00000521978|RIMS1	REV__ENSG00000079841|ENST00000521978|RIMS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.2907104492188	2	558.288202	1114.56185	2.2517	0.0012571	0.070447	3.933E-05	2.3222	0.0012965	558.2897837281895	105.54	0.7603	105.69	105.14	105.9	0.15584					53	18	4	0	0	0	0.7144	1	12846	12846		29.17	0	1	592990	+		41984	16792	28021	28034	47705	47705					0.009153322583642876
PLVSSLIPHI	10	Unmodified	_PLVSSLIPHI_					0	0	0		ENST00000498157.1_1_1:109815480-109816293:+|nuORF	ENST00000498157.1_1_1:109815480-109816293:+|nuORF	ENST00000498157.1_1_1:109815480-109816293:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3262329101562	2	538.329142	1074.64373	-0.51595	-0.00027775	-2.4109	-0.0012978	-2.9268	-0.0015756	538.3278592314944	105.99	1.6493	105.99	105.37	107.02	0					100	37	3	0	0	0	0.85939	1	10985	10985		23.042	1.0826	1	642860			41985	12822	28022	28035	47706	47706					0.10939479408125408
PLVTDLHTKLH	11	Unmodified	_PLVTDLHTKLH_					0	0	0			REV__ENSG00000198795|ENST00000361524|ZNF521	REV__ENSG00000198795|ENST00000361524|ZNF521	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	637.36865234375	2	637.366787	1272.71902	2.7628	0.0017609	3.0551	0.0019472	5.8179	0.0037081	637.3686513642523	105.87	2.2422	105.84	105.02	107.26	-0.03714					153	52	4	0	0	0	0.7342	1	11706	11706		25.574	1.0549	1	1640000	+		41986	23384	28023	28036	47707	47707					0.09357036868550495
PLVTLELK	8	Unmodified	_PLVTLELK_					0	0	0		ENST00000258534.12_1_12:102316939-102317011:+|nuORF	ENST00000258534.12_1_12:102316939-102317011:+|nuORF	ENST00000258534.12_1_12:102316939-102317011:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7911682128906	2	456.791861	911.569169	0.05486	2.506E-05	2.6152	0.0011946	2.6701	0.0012197	456.79295826454774	49.784	2.1713	49.788	48.709	50.88	0.0035973					85	53	2	0	0	0	0.80706	1	4284	4284		19.36	1.0356	1	208660			41987	9372	28024	28037	47708	47708					0.10984716596749422
PLVTLPKG	8	Unmodified	_PLVTLPKG_					0	0	0		ENST00000509818.5_1_4:119687763-119745832:-|nuORF	ENST00000509818.5_1_4:119687763-119745832:-|nuORF	ENST00000509818.5_1_4:119687763-119745832:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7672119140625	2	412.765646	823.516739	-0.33758	-0.00013934	2.1313	0.00087971	1.7937	0.00074037	412.7669144536039	43.714	1.8956	43.657	42.672	44.567	-0.056812					93	46	3	0	0	0	0.85277	1	3078	3078		25.45	0	1	313210			41988	12998	28025	28038	47709	47709					0.09792178253815109
PLVTTKLT	8	Unmodified	_PLVTTKLT_					0	0	0			REV__ENST00000554032.1_1_14:71276930-71281887:+|nuORF	REV__ENST00000554032.1_1_14:71276930-71281887:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.77325439453125	2	436.776211	871.537869	-2.0766	-0.000907	-3.9909	-0.0017431	-6.0675	-0.0026502	436.7744184885527	26.616	0.44571	26.616	26.401	26.847	0					29	19	2	0	0	0	0.84341	1	1019	1019		24.203	2.5004	1	39578	+		41989	28656	28026	28039	47710	47710					0.0969614356264401
PLVVKVKE	8	Unmodified	_PLVVKVKE_					0	0	0		ENSG00000144712|ENST00000456430|CAND2	ENSG00000144712|ENST00000456430|CAND2	ENSG00000144712|ENST00000456430|CAND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30010986328125	2	456.299853	910.585153	-0.84354	-0.00038491	3.2342	0.0014758	2.3906	0.0010908	456.30117331551685	46.601	1.8723	46.572	45.714	47.586	-0.028778					105	48	3	0	0	0	0.80706	1	3775	3775		19.36	0	1	332630			41990	4727	28027	28040	47711	47711					0.1262842283365444
PLVVLVLLL	9	Unmodified	_PLVVLVLLL_					0	0	0		ENSG00000126246|ENST00000246532|IGFLR1	ENSG00000126246|ENST00000246532|IGFLR1	ENSG00000126246|ENST00000246532|IGFLR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.815185546875	2	489.851722	977.68889	-0.83844	-0.00041071	-1.877	-0.00091947	-2.7155	-0.0013302	489.85063205499284	74.212	1.0245	74.603	74.334	75.358	0.3911					35	24	3	0	0	0	0.20789	1	8327	8327		8.8223	4.5061	1	428000			41991	3448	28028	28041	47712	47712					0.19915329941329674
PLVVQVLT	8	Unmodified	_PLVVQVLT_					0	0	0			REV__ENST00000601667.5_1_19:52217262-52219608:-|nuORF	REV__ENST00000601667.5_1_19:52217262-52219608:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7786560058594	2	434.778754	867.542954	-0.72462	-0.00031505	3.8898	0.0016912	3.1652	0.0013761	434.78037611122505	35.149	1.2526	35.093	34.81	36.063	-0.056381					100	28	4	0	0	0	0.884	1	2344	2344		33.516	1.5607	1	2671400	+		41992	29322	28029	28042	47713	47713					0.10388447425270897
PLWAKALPL	9	Unmodified	_PLWAKALPL_					0	0	0			REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.8172912597656	2	504.81567	1007.61679	2.4194	0.0012214	1.8267	0.00092216	4.2461	0.0021435	504.8165438443187	99.316	0.71481	99.678	99.409	100.12	0.36292					44	17	3	0	0	0	0.7932	1	12045	12045		25.45	2.4135	1	885230	+		41993	17423	28030	28043	47714	47714					0.11328415587615837
PLWAKALPL	9	Unmodified	_PLWAKALPL_					0	0	0			REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	504.81567	1007.61679	-0.73702	-0.00037206	5.1705	0.0026102	4.4335	0.0022381	504.8181071383438	100.03	1.0072	100.03	99.635	100.64	0	0.21533	0.0011992	NaN	25.45	60	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	459280	+		41994	17423	28030	28043							0.11328415587615837
PLWAKALPL	9	Unmodified	_PLWAKALPL_					0	0	0			REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	504.81567	1007.61679	-0.058535	-2.9549E-05	4.5822	0.0023132	4.5237	0.0022836	504.8177772894829	100.1	0.9088	100.15	99.67	100.58	0.0411	0.32979	0.00060523	NaN	25.45	46	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	378730	+		41995	17423	28030	28043							0.11328415587615837
PLWAKALPL	9	Unmodified	_PLWAKALPL_					0	0	0			REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	504.81567	1007.61679	2.6534	0.0013395	1.6916	0.00085394	4.345	0.0021934	504.8163677588378	99.954	0.87424	99.901	99.524	100.4	-0.053734	0.084387	-0.0023133	NaN	25.45	43	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	403520	+		41996	17423	28030	28043							0.11328415587615837
PLWAKALPL	9	Unmodified	_PLWAKALPL_					0	0	0			REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	504.81567	1007.61679	0.067573	3.4112E-05	4.323	0.0021823	4.3906	0.0022164	504.817675136205	99.722	0.78454	99.77	99.422	100.21	0.047523	-0.046431	0.00034353	NaN	25.45	42	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	411720	+		41997	17423	28030	28043							0.11328415587615837
PLWAKALPL	9	Unmodified	_PLWAKALPL_					0	0	0			REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	504.81567	1007.61679	-0.42736	-0.00021574	5.1452	0.0025974	4.7179	0.0023816	504.8180665689395	99.44	0.83423	99.663	99.287	100.12	0.22263	-0.1534	0.0011736	NaN	25.45	49	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	264120	+		41998	17423	28030	28043							0.11328415587615837
PLWAKALPL	9	Unmodified	_PLWAKALPL_					0	0	0			REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	504.81567	1007.61679	0.79675	0.00040221	3.7654	0.0019008	4.5621	0.002303	504.8174326793145	99.635	0.85317	99.786	99.308	100.16	0.15073	-0.030199	-0.00021948	NaN	25.45	45	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224630	+		41999	17423	28030	28043							0.11328415587615837
PLWAKALPL	9	Unmodified	_PLWAKALPL_					0	0	0			REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	504.81567	1007.61679	-1.5993	-0.00080735	6.1151	0.003087	4.5158	0.0022796	504.81858792104794	99.566	0.93217	99.752	99.319	100.25	0.18582	-0.064225	0.0021528	NaN	25.45	46	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	250150	+		42000	17423	28030	28043							0.11328415587615837
PLWAKALPL	9	Unmodified	_PLWAKALPL_					0	0	0			REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	REV__ENST00000558725.5_1_15:67519241-67546969:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	504.81567	1007.61679	2.4194	0.0012214	1.8267	0.00092216	4.2461	0.0021435	504.8165438443187	99.316	0.71481	99.678	99.409	100.12	0.36292	-0.13777	-0.0021768	NaN	25.45	44	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	885230	+		42001	17423	28030	28043							0.11328415587615837
PLWALLLPWV	10	Unmodified	_PLWALLLPWV_					0	0	0		ENST00000478416.1_1_17:18157237-18162004:-|nuORF	ENST00000478416.1_1_17:18157237-18162004:-|nuORF	ENST00000478416.1_1_17:18157237-18162004:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3662109375	2	604.365527	1206.7165	2.3603	0.0014265	-0.50963	-0.000308	1.8506	0.0011185	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.85108	1	12895	12895		19.36	0	1	5984800			42002	12389	28031	28044	47715	47715					0.12141233201555224
PLWKGIGHVI	10	Unmodified	_PLWKGIGHVI_					0	0	0		nc|ENSG00000005007|Q92900|UPF1;ENSG00000005007|ENST00000262803|UPF1	nc|ENSG00000005007|Q92900|UPF1	nc|ENSG00000005007|Q92900|UPF1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.33984375	2	560.337301	1118.66005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.28	1	103.55	103.05	104.05	0.26524								0	0	0	0.45132	1	12600	12600		35.618	0	1				42003	671	28032	28045	47716	47716					0.10546605364902462
PLWPPSPVLTT	11	Unmodified	_PLWPPSPVLTT_					0	0	0			REV__ENST00000376062.6_1_20:30253000-30253174:-|nuORF	REV__ENST00000376062.6_1_20:30253000-30253174:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.246826171875	3	403.228897	1206.66486	3.1803	0.0012824	1.5615	0.00062964	4.7418	0.001912	403.2306552720247	104.63	0.48587	104.67	104.34	104.83	0.039864					17	11	3	0	0	0	0.17305	1	11382	11382		30.569	12.736	1	91908	+		42004	25830	28033	28046	47717	47717					0.06979444716989747
PLWVIILAILL	11	Unmodified	_PLWVIILAILL_					0	0	0		ENSG00000077943|ENST00000378076|ITGA8	ENSG00000077943|ENST00000378076|ITGA8	ENSG00000077943|ENST00000378076|ITGA8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	632.92919921875	2	632.425585	1262.83662	2.8292	0.0017893	4.0853	0.0025837	6.9145	0.0043729	632.4278485771309	108.34	0.724	108.31	108	108.72	-0.031487					56	31	3	0	0	0	0.7711	1	11999	11999		17.365	2.5001	1	2849900			42005	1388	28034	28047	47718	47718					0.2157122147532391
PLWVIILAILL	11	Unmodified	_PLWVIILAILL_					0	0	0		ENSG00000077943|ENST00000378076|ITGA8	ENSG00000077943|ENST00000378076|ITGA8	ENSG00000077943|ENST00000378076|ITGA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	632.4262084960938	2	632.425585	1262.83662	6.5357	0.0041333	0.96776	0.00061203	7.5034	0.0047454	632.42587839621	109.84	1.6383	109.91	109.4	111.04	0.068001					143	71	3	0	0	0	0.79918	1	13322	13322		11.511	4.7755	1	4798300			42006	1388	28034	28047	47719	47719					0.2157122147532391
PLYLPRYD	8	Unmodified	_PLYLPRYD_					0	0	0			REV__ENSG00000110046|ENST00000377264|ATG2A;REV__ENSG00000066739|ENST00000359933|ATG2B	REV__ENSG00000110046|ENST00000377264|ATG2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8199462890625	2	518.776742	1035.53893	-0.15911	-8.254E-05	0.56771	0.00029451	0.4086	0.00021197	518.7766370354271	52.857	1.5381	53.471	52.91	54.448	0.61436					102	36	5	0	0	0	0.4196	1	5307	5307		60.294	0	1	1099000	+		42007	17789;16528	28035	28048	47720	47720					0.022583579315551106
PLYPQKPKLKP	11	Unmodified	_PLYPQKPKLKP_					0	0	0		ENST00000425155.6_1_5:176794318-176794990:+|nuORF	ENST00000425155.6_1_5:176794318-176794990:+|nuORF	ENST00000425155.6_1_5:176794318-176794990:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2740478515625	3	436.939458	1307.79654	-0.88692	-0.00038753	1.5458	0.00067543	0.6589	0.0002879	436.9399896728005	46.653	1.2955	46.625	46.139	47.434	-0.028782					103	32	5	0	0	0	0.74771	1	3849	3849		22.562	2.2466	1	597140			42008	11527	28036	28049	47721	47721					0.1549567480474252
PMCILGAFF	9	Unmodified	_PMCILGAFF_					0	0	0		nc|ENSG00000167113|Q9Y3A0-2|COQ4;ENSG00000167113|ENST00000300452|COQ4	nc|ENSG00000167113|Q9Y3A0-2|COQ4	nc|ENSG00000167113|Q9Y3A0-2|COQ4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7464294433594	2	499.745542	997.476531	0.048924	2.445E-05	2.8125	0.0014055	2.8614	0.00143	499.74682857522964	74.518	3.0175	75.077	74.05	77.067	0.55891					154	74	3	0	0	0	0.72098	1	8539	8539		39.021	1.8624	1	1021700			42009	6269	28037	28050	47722	47722					-0.022308277326260395
PMCLAVPSCC	10	Unmodified	_PMCLAVPSCC_					0	0	0			REV__ENST00000318789.8_1_3:71349009-71542591:-|nuORF	REV__ENST00000318789.8_1_3:71349009-71542591:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2101440429688	2	512.210152	1022.40575	-0.070945	-3.6339E-05	0.022832	1.1695E-05	-0.048113	-2.4644E-05	512.2100468587475	21.296	0.97677	21.231	20.762	21.739	-0.064743					65	36	2	0	0	0	0.86201	1	609	609		24.203	2.5004	1	43822	+		42010	24980	28038	28051	47723	47723					-0.10455612104112788
PMDIDPGLQY	10	Unmodified	_PMDIDPGLQY_					0	0	0			REV__ENSG00000165983|ENST00000535784|PTER	REV__ENSG00000165983|ENST00000535784|PTER	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.7677001953125	2	574.768257	1147.52196	-0.75565	-0.00043433	0.48693	0.00027987	-0.26872	-0.00015445	574.768420899859	46.221	0.88675	46.207	45.871	46.758	-0.013821					50	22	3	0	0	0	0.67571	1	3733	3733		45.972	0.020292	1	547710	+		42011	21238	28039	28052	47724	47724					-0.045899307365516506
PMDPHHVLLV	10	Oxidation (M)	_PM(Oxidation (M))DPHHVLLV_		PM(1)DPHHVLLV		PM(74)DPHHVLLV	0	0	1			REV__ENST00000578001.1_1_17:27182052-27185217:+|nuORF	REV__ENST00000578001.1_1_17:27182052-27185217:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.309326171875	2	587.307884	1172.60121	-1.5147	-0.00088961	3.634	0.0021343	2.1193	0.0012447	587.309954318002	47.157	0.74612	47.628	47.3	48.047	0.47139					44	17	4	0	0	0	0.28443	1	4459	4459		73.975	6.4811	1	4655600	+		42012	19014	28040	28053	47725	47725		278			0.021817610082280225
PMEEYDSGY	9	Unmodified	_PMEEYDSGY_					0	0	0			REV__ENSG00000146433|ENST00000684151|TMEM181	REV__ENSG00000146433|ENST00000684151|TMEM181	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.8287963867188	2	545.705322	1089.39609	0.9443	0.00051531	-3.9873	-0.0021759	-3.043	-0.0016606	545.7031701506355	60.186	0.52025	60.154	59.764	60.284	-0.031731					20	13	2	0	0	0	0.20789	1	5636	5636		31.955	19.748	1	104030	+		42013	20017	28041	28054	47726	47726					-0.1450306231263312
PMEIPTLTRKP	11	Unmodified	_PMEIPTLTRKP_					0	0	0		nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	nc|ENSG00000080345|Q5UIP0-2|RIF1	nc|ENSG00000080345|Q5UIP0-2|RIF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8560180664062	2	641.863023	1281.71149	-0.046786	-3.003E-05	-4.1793	-0.0026825	-4.226	-0.0027125	642.3619686544171	113.17	0.33764	113.1	112.9	113.24	-0.067215					42	13	4	0	0	0	0.70737	1	12270	12270		30.318	2.2362	1	78874			42014	1439	28042	28055	47727	47727					0.08190561276592234
PMFLALIL	8	Unmodified	_PMFLALIL_					0	0	0			REV__ENSG00000138279|ENST00000372921|ANXA7	REV__ENSG00000138279|ENST00000372921|ANXA7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7582092285156	2	459.280075	916.545597	-1.3141	-0.00060354	2.2579	0.001037	0.94385	0.00043349	459.2810645495683	28.612	0.84732	28.57	28.353	29.2	-0.042831					26	19	2	0	0	0	0.4196	1	1750	1750		33.493	23.228	1	49637	+		42015	19454	28043	28056	47728	47728					0.08398579558604524
PMGKSVPGK	9	Unmodified	_PMGKSVPGK_					0	0	0		nc|ENSG00000168066|Q15637-6|SF1	nc|ENSG00000168066|Q15637-6|SF1	nc|ENSG00000168066|Q15637-6|SF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.75439453125	2	450.752213	899.489873	0.36741	0.00016561	4.3918	0.0019796	4.7592	0.0021452	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.69624	1	8106	8106		40.778	7.2626	1	394230			42016	15077	28044	28057	47729	47729					0.036107463709754484
PMGKSVPGK	9	Unmodified	_PMGKSVPGK_					0	0	0		nc|ENSG00000168066|Q15637-6|SF1	nc|ENSG00000168066|Q15637-6|SF1	nc|ENSG00000168066|Q15637-6|SF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7546081542969	2	450.752213	899.489873	0.78549	0.00035406	3.5542	0.0016021	4.3397	0.0019561	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.78983	1	8046	8046		27.882	2.4321	1	420760			42017	15077	28044	28057	47730	47730					0.036107463709754484
PMGPVPNP	8	Unmodified	_PMGPVPNP_					0	0	0		ENSG00000130300|ENST00000252590|PLVAP	ENSG00000130300|ENST00000252590|PLVAP	ENSG00000130300|ENST00000252590|PLVAP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5467834472656	2	404.704731	807.39491	2.7642	0.0011187	2.8873	0.0011685	5.6515	0.0022872	404.7052714397263	28.053	0.26654	28.03	27.944	28.211	-0.023558					7	5	2	0	0	0	0.4196	1	1320	1320		21.702	0	1	10000			42018	3632	28045	28058	47731	47731					-0.016491871002244807
PMIVSGMLEHE	11	Unmodified	_PMIVSGMLEHE_					0	0	0		nc|ENSG00000197535|Q9Y4I1-2|MYO5A;nc|ENSG00000197535|Q9Y4I1|MYO5A;ENSG00000197535|ENST00000399233|MYO5A	nc|ENSG00000197535|Q9Y4I1-2|MYO5A	nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.8302001953125	2	621.796491	1241.57843	-0.09932	-6.1757E-05	-4.4032	-0.0027379	-4.5025	-0.0027996	622.2952040066231	64.096	0.25579	64.483	64.352	64.608	0.3868					7	5	2	0	0	0	0.17347	1	6912	6912		36.447	19.974	1	50185			42019	8173	28046	28059	47732	47732					-0.03269626171527307
PMKKEVKTSL	10	Unmodified	_PMKKEVKTSL_					0	0	0		ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3;nc|ENSG00000158486|Q8TD57-3|DNAH3;nc|ENSG00000158486|Q8TD57-2|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.8407592773438	2	580.839017	1159.66348	-0.90693	-0.00052678	3.5006	0.0020333	2.5936	0.0015065	580.8407767096548	69.755	0.8518	69.79	69.548	70.399	0.035622					124	41	4	0	0	0	0.86348	1	6684	6684		31.53	2.3598	1	14836000			42020	5483	28047	28060	47733	47733					0.09003487356608275
PMLCICCAIGF	11	2 Carbamidomethyl (C)	_PMLC(Carbamidomethyl (C))IC(Carbamidomethyl (C))CAIGF_	PMLC(0.999)IC(0.977)C(0.024)AIGF		PMLC(29)IC(16)C(-16)AIGF		0	2	0			REV__ENST00000421852.5_1_3:185208641-185208755:-|nuORF	REV__ENST00000421852.5_1_3:185208641-185208755:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	642.7822875976562	2	642.784015	1283.55348	-0.89372	-0.00057447	-0.34139	-0.00021944	-1.2351	-0.00079391	642.7837003710583	40.122	0.62832	40.122	39.846	40.475	0					44	16	4	0	0	0	0.63354	1	2638	2638		40.573	6.651	3	298990	+		42021	26502	28048	28061	47734	47734	325;326				-0.07695720570109188
PMLCICCAIGF	11	2 Carbamidomethyl (C)	_PMLC(Carbamidomethyl (C))IC(Carbamidomethyl (C))CAIGF_					0	2	0			REV__ENST00000421852.5_1_3:185208641-185208755:-|nuORF	REV__ENST00000421852.5_1_3:185208641-185208755:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	642.784015	1283.55348	-1.3714	-0.00088153	-2.0441	-0.0013139	-3.4155	-0.0021954	643.2839464800658	40.406	0.3631	40.362	40.226	40.589	-0.043694	0.12033	-0.0015543	NaN	40.573	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57352	+		42022	26502	28048	28061			325;326				-0.07695720570109188
PMLVLASGDN	10	Unmodified	_PMLVLASGDN_					0	0	0		ENSG00000213398|ENST00000264005|LCAT	ENSG00000213398|ENST00000264005|LCAT	ENSG00000213398|ENST00000264005|LCAT	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.75616455078125	2	508.757692	1015.50083	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.05	1	70.434	69.934	70.934	0.38416								0	0	0	0.45132	1	7750	7750		44.377	3.599	1				42023	8588	28049	28062	47735	47735					-0.00629896045404621
PMPLRGGF	8	Unmodified	_PMPLRGGF_					0	0	0			REV__ENSG00000260456|ENST00000567970|C16orf95	REV__ENSG00000260456|ENST00000567970|C16orf95	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77130126953125	2	437.733823	873.453093	-0.54329	-0.00023782	-2.342	-0.0010252	-2.8853	-0.001263	437.73444457009015	38.661	0.20792	39.183	39.079	39.287	0.52235					6	4	2	0	0	0	0.4196	1	3205	3205		14.664	9.5772	1	78512	+		42024	23938	28050	28063	47736	47736					0.011304945450660853
PMRLVDFPM	9	Oxidation (M)	_PMRLVDFPM(Oxidation (M))_		PMRLVDFPM(1)		PM(-62)RLVDFPM(62)	0	0	1		ENSG00000109158|ENST00000264318|GABRA4	ENSG00000109158|ENST00000264318|GABRA4	ENSG00000109158|ENST00000264318|GABRA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.2791137695312	2	561.277738	1120.54092	0.97335	0.00054632	2.0289	0.0011388	3.0023	0.0016851	561.2787758883688	87.737	0.9844	88.185	87.767	88.752	0.44761					61	23	4	0	0	0	0.28875	1	10300	10300		65.803	9.0821	2	1224500			42025	2451	28051	28064	47737	47737		48			-0.014526726464964668
PMRSEQSQ	8	Unmodified	_PMRSEQSQ_					0	0	0			REV__ENSG00000117877|ENST00000309424|POLR1G	REV__ENSG00000117877|ENST00000309424|POLR1G	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.7196960449219	2	481.721641	961.428729	-0.93146	-0.00044871	-2.5142	-0.0012111	-3.4457	-0.0016598	481.72023990651155	23.198	0.39943	23.148	22.905	23.304	-0.050076					20	13	2	0	0	0	0.884	1	754	754		33.516	5.2613	1	31333	+		42026	18286	28052	28065	47738	47738					-0.05352810399108421
PMVPEAGHM	9	Unmodified	_PMVPEAGHM_					0	0	0		ENST00000524585.1_1_11:64781679-64786448:+|nuORF	ENST00000524585.1_1_11:64781679-64786448:+|nuORF	ENST00000524585.1_1_11:64781679-64786448:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.71826171875	2	484.720055	967.425558	0.76607	0.00037133	-4.2853	-0.0020772	-3.5193	-0.0017059	484.71784448733064	98.881	4.1852	99.038	95.672	99.857	0.15659					143	97	2	0	0	0	0.72402	1	10337	10337		38.806	5.2906	1	472970			42027	13220	28053	28066	47739	47739					-0.05945776777480205
PNAALCRVY	9	Unmodified	_PNAALCRVY_					0	0	0		nc|ENSG00000136108|Q8WWK9-6|CKAP2;chr13:52456179-52456523|49|10.69|0.36|4.91|+|ENST00000490903|CKAP2,CKAP2;ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2	nc|ENSG00000136108|Q8WWK9-6|CKAP2	nc|ENSG00000136108|Q8WWK9-6|CKAP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.34747314453125	2	503.760569	1005.50659	1.7487	0.00088091	-0.60955	-0.00030707	1.1391	0.00057384	504.2613317173877	34.561	0.1659	34.918	34.787	34.953	0.35712					7	3	3	0	0	0	0.20789	1	2585	2585		24.203	10.427	1	49457			42028	158	28054	28067	47740	47740					0.004052472569242127
PNAGHRLLTKA	11	Unmodified	_PNAGHRLLTKA_					0	0	0			REV__ENSG00000092148|ENST00000399332|HECTD1	REV__ENSG00000092148|ENST00000399332|HECTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3425903320312	2	589.343646	1176.67274	0.80964	0.00047716	-2.3286	-0.0013723	-1.5189	-0.00089516	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.72106	1	9298	9298		28.081	0.19925	1	6634500	+		42029	17030	28055	28068	47741	47741					0.09147016757128767
PNAGKVLL	8	Unmodified	_PNAGKVLL_					0	0	0		ENSG00000181555|ENST00000409792|SETD2	ENSG00000181555|ENST00000409792|SETD2	ENSG00000181555|ENST00000409792|SETD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2568359375	2	406.255446	810.496338	0.32239	0.00013097	4.1267	0.0016765	4.4491	0.0018075	406.25699058298386	55.031	2.344	55.122	53.969	56.313	0.091167					99	72	2	0	0	0	0.81548	1	4624	4624		20.482	5.8177	1	315510			42030	7393	28056	28069	47742	47742					0.08351007594001203
PNAGKVLL	8	Unmodified	_PNAGKVLL_					0	0	0		ENSG00000181555|ENST00000409792|SETD2	ENSG00000181555|ENST00000409792|SETD2	ENSG00000181555|ENST00000409792|SETD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2575988769531	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.81548	1	3919	3919		20.482	0	1	334920			42031	7393	28056	28069	47743	47743					0.08351007594001203
PNAGSKRTP	9	Unmodified	_PNAGSKRTP_					0	0	0		nc|ENSG00000118156|Q9H0D2-2|ZNF541;ENSG00000118156|ENST00000391901|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2532043457031	2	464.253966	926.493378	-0.76573	-0.00035549	0.99904	0.00046381	0.2333	0.00010831	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.44421	1	9904	9904		54.776	10.245	1	1046600			42032	3012	28057	28070	47744	47744					0.027191324691784757
PNAIFKALQ	9	Unmodified	_PNAIFKALQ_					0	0	0		ENSG00000125398|ENST00000245479|SOX9	ENSG00000125398|ENST00000245479|SOX9	ENSG00000125398|ENST00000245479|SOX9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2903747558594	2	501.292559	1000.57057	-0.50774	-0.00025453	-3.8573	-0.0019337	-4.3651	-0.0021882	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.76255	1	8225	8225		35.618	7.736	1	3014100			42033	3387	28058	28071	47745	47745					0.07030350685522535
PNAIKFLP	8	Unmodified	_PNAIKFLP_					0	0	0			REV__nc|ENSG00000166454|O43313-2|ATMIN	REV__nc|ENSG00000166454|O43313-2|ATMIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2709655761719	2	450.271096	898.527639	-1.2372	-0.00055708	-0.035217	-1.5857E-05	-1.2724	-0.00057294	450.2709514885662	109.62	0.86229	109.74	109.65	110.51	0.12289					49	33	2	0	0	0	0.89457	1	11812	11812		37.028	1.8278	1	789160	+		42034	21296	28059	28072	47746	47746					0.07431580628076517
PNAIKFLP	8	Unmodified	_PNAIKFLP_					0	0	0			REV__nc|ENSG00000166454|O43313-2|ATMIN	REV__nc|ENSG00000166454|O43313-2|ATMIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2713928222656	2	450.271096	898.527639	0.75391	0.00033946	-3.9407	-0.0017744	-3.1868	-0.0014349	450.26987686821786	109.73	0.67853	109.81	109.64	110.32	0.078545					48	29	3	0	0	0	0.86791	1	11790	11790		28.254	2.8041	1	779360	+		42035	21296	28059	28072	47747	47747					0.07431580628076517
PNALLALR	8	Unmodified	_PNALLALR_					0	0	0			REV__ENST00000342295.5_2_4:26434113-26434272:+|nuORF	REV__ENST00000342295.5_2_4:26434113-26434272:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.2737731933594	2	434.27417	866.533787	-0.474	-0.00020585	-0.78373	-0.00034035	-1.2577	-0.0005462	434.2735892156423	82.201	1.4504	82.627	82.08	83.531	0.42646					66	35	3	0	0	0	0.90465	1	9531	9531		40.573	5.3719	1	1211300	+		42036	25272	28060	28073	47748	47748					0.09518098859609836
PNALLALR	8	Unmodified	_PNALLALR_					0	0	0			REV__ENST00000342295.5_2_4:26434113-26434272:+|nuORF	REV__ENST00000342295.5_2_4:26434113-26434272:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2519836425781	2	434.27417	866.533787	0.022129	9.6101E-06	1.9887	0.00086366	2.0109	0.00087327	434.2735138272407	77.625	1.0772	78.03	77.72	78.797	0.40531					51	25	4	0	0	0	0.4196	1	8944	8944		30.504	0	1	286150	+		42037	25272	28060	28073	47749	47749					0.09518098859609836
PNALVALCL	9	Unmodified	_PNALVALCL_					0	0	0			REV__ENSG00000198650|ENST00000355962|TAT	REV__ENSG00000198650|ENST00000355962|TAT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7673034667969	2	457.262413	912.510274	0.67365	0.00030803	3.461	0.0015826	4.1346	0.0018906	457.26395233835285	16.719	0.81597	16.637	16.329	17.145	-0.082102					58	34	2	0	0	0	0.20789	1	138	138		25.45	13.939	1	49652	+		42038	23352	28061	28074	47750	47750					0.050519170307552486
PNANREEAS	9	Unmodified	_PNANREEAS_					0	0	0		ENST00000396901.5_2_19:36389387-36389702:-|nuORF	ENST00000396901.5_2_19:36389387-36389702:-|nuORF	ENST00000396901.5_2_19:36389387-36389702:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30084228515625	2	494.228145	986.441737	-0.58874	-0.00029097	-2.3466	-0.0011598	-2.9354	-0.0014507	494.22866039004566	97.35	0.29053	97.581	97.491	97.782	0.23103					10	6	3	0	0	0	0.20789	1	10054	10054		31.53	0	1	56505			42039	11125	28062	28075	47751	47751					-0.05202656015376306
PNAPIDLLTKL	11	Unmodified	_PNAPIDLLTKL_					0	0	0			REV__nc|ENSG00000070540|Q5MNZ9-2|WIPI1	REV__nc|ENSG00000070540|Q5MNZ9-2|WIPI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.855712890625	2	597.858264	1193.70197	-0.56225	-0.00033615	-2.7782	-0.001661	-3.3405	-0.0019971	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.66929	1	9623	9623		36.447	0	1	2042000	+		42040	16604	28063	28076	47752	47752					0.11287116262769814
PNAQHMLLLK	10	Unmodified	_PNAQHMLLLK_					0	0	0			REV__nc|ENSG00000041515|Q9Y6X6-3|MYO16	REV__nc|ENSG00000041515|Q9Y6X6-3|MYO16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	583.3359375	2	582.831526	1163.6485	-0.40613	-0.0002367	2.3297	0.0013578	1.9236	0.0011211	582.832911894326	94.456	2.7605	94.456	93.622	96.382	0					111	64	3	0	0	0	0.86718	1	9423	9423		27.882	3.3631	1	367730	+		42041	16321	28064	28077	47753	47753					0.07322040279245812
PNARRAHLK	9	Unmodified	_PNARRAHLK_					0	0	0		nc|ENSG00000090487|Q9NZD8-2|SPG21;ENSG00000090487|ENST00000204566|SPG21	nc|ENSG00000090487|Q9NZD8-2|SPG21	nc|ENSG00000090487|Q9NZD8-2|SPG21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8168334960938	2	531.817599	1061.62064	1.0296	0.00054754	-2.3934	-0.0012729	-1.3639	-0.00072533	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.78058	1	8803	8803		30.504	3.7075	1	1241100			42042	1646	28065	28078	47754	47754					0.09229898134026371
PNARRAHLK	9	Unmodified	_PNARRAHLK_					0	0	0		nc|ENSG00000090487|Q9NZD8-2|SPG21;ENSG00000090487|ENST00000204566|SPG21	nc|ENSG00000090487|Q9NZD8-2|SPG21	nc|ENSG00000090487|Q9NZD8-2|SPG21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8168334960938	2	531.817599	1061.62064	1.1723	0.00062347	-2.558	-0.0013604	-1.3857	-0.00073692	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.7932	1	8985	8985		23.042	3.0457	1	4413000			42043	1646	28065	28078	47755	47755					0.09229898134026371
PNARRAHLK	9	Unmodified	_PNARRAHLK_					0	0	0		nc|ENSG00000090487|Q9NZD8-2|SPG21;ENSG00000090487|ENST00000204566|SPG21	nc|ENSG00000090487|Q9NZD8-2|SPG21	nc|ENSG00000090487|Q9NZD8-2|SPG21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8167114257812	2	531.817599	1061.62064	0.70533	0.00037511	-2.1628	-0.0011502	-1.4575	-0.00077513	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.78058	1	8588	8588		30.504	8.5438	1	1163300			42044	1646	28065	28078	47756	47756					0.09229898134026371
PNARRAHLK	9	Unmodified	_PNARRAHLK_					0	0	0		nc|ENSG00000090487|Q9NZD8-2|SPG21;ENSG00000090487|ENST00000204566|SPG21	nc|ENSG00000090487|Q9NZD8-2|SPG21	nc|ENSG00000090487|Q9NZD8-2|SPG21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8167114257812	2	531.817599	1061.62064	1.0704	0.00056928	-2.3163	-0.0012319	-1.2459	-0.00066258	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.74721	2	10551	10551;10563		37.159	14.117	1	4490200			42045	1646	28065	28078	47757;47758	47757					0.09229898134026371
PNASRKKFVKK	11	Unmodified	_PNASRKKFVKK_					0	0	0		ENSG00000141101|ENST00000268802|NOB1;ENST00000502915.1_1_4:139482657-139483092:+|nuORF	ENSG00000141101|ENST00000268802|NOB1	ENSG00000141101|ENST00000268802|NOB1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2521667480469	3	434.93834	1301.79319	-1.6235	-0.00070613	-2.3388	-0.0010172	-3.9623	-0.0017234	435.2715241887638	82.261	0.47418	82.387	82.193	82.667	0.12601					11	10	2	0	0	0	0.17302	1	7898	7898		33.039	21.107	1	35019			42046	4479	28066	28079	47759	47759					0.1543642475071465
PNATEDGPAP	10	Unmodified	_PNATEDGPAP_					0	0	0		ENST00000525331.5_1_16:70026957-70027083:-|nuORF	ENST00000525331.5_1_16:70026957-70027083:-|nuORF	ENST00000525331.5_1_16:70026957-70027083:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7178955078125	2	484.719621	967.42469	-1.6647	-0.00080692	-1.0387	-0.00050347	-2.7034	-0.0013104	484.718975245025	98.748	4.2341	98.941	95.671	99.905	0.1928					171	98	2	0	0	0	0.77314	1	10092	10092		40.778	9.2484	1	437580			42047	13236	28067	28080	47760	47760					-0.060325766211803966
PNATLEHFY	9	Unmodified	_PNATLEHFY_					0	0	0		ENST00000559020.1_1_1:150940136-150940936:-|nuORF;ENSG00000143418|ENST00000368954|CERS2	ENST00000559020.1_1_1:150940136-150940936:-|nuORF	ENST00000559020.1_1_1:150940136-150940936:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2593994140625	2	546.261456	1090.50836	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.639	1	60.192	59.692	60.692	0.55323								0	0	0	0.044014	1	6310	6310		90.777	8.5361	1				42048	4629	28068	28081	47761	47761					-0.03327420453456398
PNATVGPGLVP	11	Unmodified	_PNATVGPGLVP_					0	0	0			REV__ENSG00000228570|ENST00000429984|NUTM2E	REV__ENSG00000228570|ENST00000429984|NUTM2E	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.28533935546875	2	511.287474	1020.5604	-1.5518	-0.0007934	0.65042	0.00033255	-0.90135	-0.00046085	511.28763661664226	41.815	1.2851	41.815	41.359	42.644	0					75	31	4	0	0	0	0.58425	1	2906	2906		45.972	3.108	1	1825200	+		42049	22987	28069	28082	47762	47762					0.05093742960286818
PNAVEIKKF	9	Unmodified	_PNAVEIKKF_					0	0	0			REV__ENSG00000137642|ENST00000260197|SORL1	REV__ENSG00000137642|ENST00000260197|SORL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3034057617188	2	523.305667	1044.59678	-1.0823	-0.0005664	-2.8643	-0.0014989	-3.9466	-0.0020653	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.77696	1	10307	10307		31.53	2.3803	1	13160000	+		42050	19397	28070	28083	47763	47763					0.0762661985700106
PNAVLLPGC	9	Unmodified	_PNAVLLPGC_					0	0	0		nc|ENSG00000170959|M0R2J8|DCDC1;chr11:30915711-30916870|14|14.5|0.66|4.46|-|ENST00000597505|DCDC1,DCDC1;chr11:30911420-30915511|13|14.38|0.7|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30909116-30911327|13|15.38|0.76|4.34|-|ENST00000597505|DCDC1,DCDC1;chr11:30905164-30906540|21|14.05|0.72|4.28|-|ENST00000597505|DCDC1,DCDC1;chr11:30903683-30904961|18|18.22|0.57|5.0|-|ENST00000597505|DCDC1,DCDC1;chr11:30899642-30900346|23|15.83|0.82|4.27|-|ENST00000597505|DCDC1,DCDC1;chr11:30894384-30899541|18|19.5|0.94|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30892997-30894248|22|18.0|0.9|4.32|-|ENST00000597505|DCDC1,DCDC1;ENSG00000170959|ENST00000684477|DCDC1;ENST00000342355.8_1_11:30965860-31263019:-|nuORF;ENST00000437348.5_1_11:31115730-31149186:-|nuORF	nc|ENSG00000170959|M0R2J8|DCDC1;ENST00000437348.5_1_11:31115730-31149186:-|nuORF	nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2414245605469	2	442.238938	882.463324	0.21245	9.3954E-05	4.1992	0.0018571	4.4117	0.001951	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.69914	1	9366	9366		40.573	1.7665	1	1030200			42051	100;11737	28071	28084	47764	47764					0.017390574796422698
PNAVPLRVF	9	Unmodified	_PNAVPLRVF_					0	0	0			REV__nc|ENSG00000159403|P00736|C1R	REV__nc|ENSG00000159403|P00736|C1R	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7991943359375	2	506.800552	1011.58655	-1.5362	-0.00077856	2.1529	0.0010911	0.61671	0.00031255	506.8015777288388	44.442	2.8102	44.442	42.605	45.415	0					120	68	3	0	0	0	0.77546	1	3310	3310		31.955	5.2619	1	386210	+		42052	20659	28072	28085	47765	47765					0.08122056922422871
PNAVPLRVF	9	Unmodified	_PNAVPLRVF_					0	0	0			REV__nc|ENSG00000159403|P00736|C1R	REV__nc|ENSG00000159403|P00736|C1R	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7998352050781	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.666	1	43.666	43.166	44.166	0								0	0	0	0.30416	1	3113	3113		29.15	6.1071	1		+		42053	20659	28072	28085	47766	47766					0.08122056922422871
PNAVPLRVF	9	Unmodified	_PNAVPLRVF_					0	0	0			REV__nc|ENSG00000159403|P00736|C1R	REV__nc|ENSG00000159403|P00736|C1R	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7986755371094	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.661	1	50.661	50.161	51.161	0								0	0	0	0.32159	1	4060	4060		23.042	4.7181	1		+		42054	20659	28072	28085	47767	47767					0.08122056922422871
PNAVPLRVF	9	Unmodified	_PNAVPLRVF_					0	0	0			REV__nc|ENSG00000159403|P00736|C1R	REV__nc|ENSG00000159403|P00736|C1R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8011779785156	2	506.800552	1011.58655	0.2762	0.00013998	0.32684	0.00016564	0.60304	0.00030562	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.74721	2	3567	3567;3631		37.159	1.9584	1	416790	+		42055	20659	28072	28085	47768;47769	47768					0.08122056922422871
PNAVPLRVF	9	Unmodified	_PNAVPLRVF_					0	0	0			REV__nc|ENSG00000159403|P00736|C1R	REV__nc|ENSG00000159403|P00736|C1R	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8002014160156	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.541	1	45.51	45.01	46.01	-0.031067								0	0	0	0.29103	1	3692	3692		40.573	7.057	1		+		42056	20659	28072	28085	47770	47770					0.08122056922422871
PNAVPLRVF	9	Unmodified	_PNAVPLRVF_					0	0	0			REV__nc|ENSG00000159403|P00736|C1R	REV__nc|ENSG00000159403|P00736|C1R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8040771484375	2	506.800552	1011.58655	-0.4843	-0.00024544	2.1408	0.001085	1.6565	0.00083952	506.8016364988691	53.923	1.2683	53.971	53.181	54.449	0.047802					71	44	2	0	0	0	0.78058	1	4437	4437		30.504	7.4612	1	157540	+		42057	20659	28072	28085	47771	47771					0.08122056922422871
PNAVPLRVF	9	Unmodified	_PNAVPLRVF_					0	0	0			REV__nc|ENSG00000159403|P00736|C1R	REV__nc|ENSG00000159403|P00736|C1R	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.8009338378906	2	506.800552	1011.58655	-0.8825	-0.00044725	0.87145	0.00044165	-0.011057	-5.6038E-06	506.8008725439838	42.168	3.4048	42.866	41.632	45.037	0.69754					178	86	3	0	0	0	0.77546	1	3707	3707		31.955	6.5047	1	1296600	+		42058	20659	28072	28085	47772	47772					0.08122056922422871
PNAVPLRVF	9	Unmodified	_PNAVPLRVF_					0	0	0			REV__nc|ENSG00000159403|P00736|C1R	REV__nc|ENSG00000159403|P00736|C1R	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.775390625	2	506.800552	1011.58655	-0.0091152	-4.6196E-06	0.70648	0.00035804	0.69736	0.00035342	506.8008715270005	45.074	2.5803	45.918	44.736	47.316	0.84438					87	63	2	0	0	0	0.20789	1	4313	4313		11.511	0	1	481050	+		42059	20659	28072	28085	47773	47773					0.08122056922422871
PNAVVTTWITL	11	Unmodified	_PNAVVTTWITL_					0	0	0			REV__ENSG00000178201|ENST00000321039|VN1R1	REV__ENSG00000178201|ENST00000321039|VN1R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.56475830078125	3	405.564168	1213.67067	-1.0529	-0.00042701	2.5673	0.0010412	1.5144	0.00061418	405.5651485487608	63.261	1.4207	63.284	62.805	64.225	0.022984					129	62	3	0	0	0	0.73893	1	5533	5533		21.78	0.74819	1	264990	+		42060	22264	28073	28086	47774	47774					0.0723854322866373
PNAVYDIVK	9	Unmodified	_PNAVYDIVK_					0	0	0		ENST00000521993.2_1_8:37597892-37607371:+|nuORF;nc|ENSG00000147475|O94905-2|ERLIN2;nc|ENSG00000147475|O94905-3|ERLIN2;ENSG00000147475|ENST00000519638|ERLIN2	ENST00000521993.2_1_8:37597892-37607371:+|nuORF	ENST00000521993.2_1_8:37597892-37607371:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8035888671875	2	509.782025	1017.5495	-0.054388	-2.7726E-05	0.79692	0.00040626	0.74254	0.00037853	510.28118794655893	87.006	0.43394	87.073	86.793	87.227	0.067444					13	9	2	0	0	0	0.20789	1	8752	8752		39.253	11.371	1	28623			42061	4906	28074	28087	47775	47775					0.04142340586008686
PNDERLLSI	9	Unmodified	_PNDERLLSI_					0	0	0		ENSG00000090989|ENST00000381295|EXOC1;nc|ENSG00000090989|Q9NV70-2|EXOC1	ENSG00000090989|ENST00000381295|EXOC1	ENSG00000090989|ENST00000381295|EXOC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7926025390625	2	528.787838	1055.56112	1.1082	0.00058602	-3.8471	-0.0020343	-2.7389	-0.0014483	528.7857333475357	35.516	0.26364	35.764	35.63	35.894	0.24769					14	6	3	0	0	0	0.20789	1	2738	2738		14.137	0	1	217840			42062	1662	28075	28088	47776	47776					0.03556537609347288
PNDGVQLL	8	Unmodified	_PNDGVQLL_					0	0	0			REV__ENSG00000166159|ENST00000299194|LRTM2	REV__ENSG00000166159|ENST00000299194|LRTM2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2614440917969	2	428.232168	854.449782	1.4073	0.00060264	-3.7434	-0.0016031	-2.3362	-0.0010004	428.23027435391003	90.905	0.93145	90.838	90.264	91.196	-0.067093					28	22	3	0	0	0	0.4196	1	9497	9497		37.159	0	1	201650	+		42063	21259	28076	28089	47777	47777					0.016735229720552525
PNDIILLL	8	Unmodified	_PNDIILLL_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|76|2|sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|76|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.78564453125	2	455.784036	909.553519	-0.1802	-8.2133E-05	1.6797	0.00076557	1.4995	0.00068343	455.7846366221301	43.666	1.1994	43.616	42.896	44.095	-0.050308					47	28	2	0	0	0	0.80706	1	3041	3041		19.36	0	1	227320	+		42064	29447	28077	28090	47778	47778					0.09512430079723799
PNDLEVLI	8	Unmodified	_PNDLEVLI_					0	0	0		ENSG00000186675|ENST00000373359|MAGEE2	ENSG00000186675|ENST00000373359|MAGEE2	ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7563171386719	2	456.755475	911.496398	-1.7329	-0.00079149	4.3531	0.0019883	2.6202	0.0011968	456.7573270806215	49.122	0.83448	49.122	48.737	49.572	0					35	19	2	0	0	0	0.81548	1	3856	3856		20.482	0	1	56090			42065	7811	28078	28091	47779	47779					0.03710962803347684
PNDVENVAP	9	Unmodified	_PNDVENVAP_					0	0	0			REV__ENST00000477452.1_1_13:41948000-41949735:+|nuORF	REV__ENST00000477452.1_1_13:41948000-41949735:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7286376953125	2	477.729989	953.445425	0.36854	0.00017606	-3.7318	-0.0017828	-3.3633	-0.0016067	477.7283055731362	97.887	2.0378	98.264	97.227	99.265	0.37679					128	49	5	0	0	0	0.47272	1	11838	11838		53.351	2.016	1	10499000	+		42066	21855	28079	28092	47780	47780					-0.03315986241511837
PNDVENVAP	9	Unmodified	_PNDVENVAP_					0	0	0			REV__ENST00000477452.1_1_13:41948000-41949735:+|nuORF	REV__ENST00000477452.1_1_13:41948000-41949735:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	477.729989	953.445425	-0.099768	-4.7662E-05	-3.014	-0.0014399	-3.1138	-0.0014876	477.72850460941174	98.351	0.66303	98.408	98.094	98.757	0.056839	0.18755	0.00023419	NaN	53.351	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73532	+		42067	21855	28079	28092							-0.03315986241511837
PNDVENVAP	9	Unmodified	_PNDVENVAP_					0	0	0			REV__ENST00000477452.1_1_13:41948000-41949735:+|nuORF	REV__ENST00000477452.1_1_13:41948000-41949735:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	477.729989	953.445425	2.3703	0.0011324	-5.7738	-0.0027583	-3.4034	-0.0016259	477.72736843594254	98.426	0.57646	98.371	98.113	98.689	-0.054817	0.15059	-0.0024026	NaN	53.351	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77971	+		42068	21855	28079	28092							-0.03315986241511837
PNDVENVAP	9	Unmodified	_PNDVENVAP_					0	0	0			REV__ENST00000477452.1_1_13:41948000-41949735:+|nuORF	REV__ENST00000477452.1_1_13:41948000-41949735:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	477.729989	953.445425	-0.35471	-0.00016946	-2.8384	-0.001356	-3.1931	-0.0015254	477.7286192980568	98.189	0.57617	98.237	98.012	98.588	0.048157	0.016834	0.00040203	NaN	53.351	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77152	+		42069	21855	28079	28092							-0.03315986241511837
PNDVENVAP	9	Unmodified	_PNDVENVAP_					0	0	0			REV__ENST00000477452.1_1_13:41948000-41949735:+|nuORF	REV__ENST00000477452.1_1_13:41948000-41949735:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	477.729989	953.445425	-0.83237	-0.00039765	-1.8574	-0.00088733	-2.6898	-0.001285	477.728935327791	97.786	0.95603	98.014	97.569	98.525	0.22788	-0.20648	0.0013393	NaN	53.351	49	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	466620	+		42070	21855	28079	28092							-0.03315986241511837
PNEKPKSR	8	Unmodified	_PNEKPKSR_					0	0	0		L1MEd_dup15044|chr11:43860917-43861714:-|1.2379578247766878|0.3289477204013815|1.91|63.0|24|3|sense	L1MEd_dup15044|chr11:43860917-43861714:-|1.2379578247766878|0.3289477204013815|1.91|63.0|24|3|sense	L1MEd_dup15044|chr11:43860917-43861714:-|1.2379578247766878|0.3289477204013815|1.91|63.0|24|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.27197265625	2	478.269616	954.524678	0.072039	3.4454E-05	-0.36066	-0.00017249	-0.28863	-0.00013804	478.2693620535057	37.91	0.56068	37.886	37.617	38.178	-0.023979					20	12	2	0	0	0	0.92457	1	2536	2536		47.916	0	1	104200			42071	14605	28080	28093	47781	47781					0.045597055032772005
PNELHKLF	8	Unmodified	_PNELHKLF_					0	0	0			REV__ENSG00000197077|ENST00000358431|KIAA1671	REV__ENSG00000197077|ENST00000358431|KIAA1671	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	499.2693176269531	2	499.276909	996.539266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.459	1	71.459	70.959	71.959	0								0	0	0	0.29344	1	6377	6377		31.955	5.1588	1		+		42072	23194	28081	28094	47782	47782					0.04085777651425815
PNELVIHHLE	10	Unmodified	_PNELVIHHLE_					0	0	0			REV__nc|ENSG00000091592|Q9C000-5|NLRP1	REV__nc|ENSG00000091592|Q9C000-5|NLRP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8243408203125	2	600.822212	1199.62987	-0.59314	-0.00035637	4.4207	0.002656	3.8275	0.0022997	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.54701	1	6811	6811		52.937	3.4007	1	825510	+		42073	17019	28082	28095	47783	47783					0.03804201909065341
PNERLTSD	8	Unmodified	_PNERLTSD_					0	0	0		ENSG00000121053|ENST00000225371|EPX	ENSG00000121053|ENST00000225371|EPX	ENSG00000121053|ENST00000225371|EPX	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7776794433594	2	466.227613	930.440674	-1.0365	-0.00048322	-3.0426	-0.0014185	-4.079	-0.0019018	466.22616993394666	79.759	0.63255	79.89	79.678	80.311	0.13085					37	22	2	0	0	0	0.4196	1	7583	7583		27.882	0	1	125310			42074	3162	28083	28096	47784	47784					-0.027328703842840696
PNFKLKQN	8	Unmodified	_PNFKLKQN_					0	0	0			REV__nc|ENSG00000166912|Q9NXD2-3|MTMR10	REV__nc|ENSG00000166912|Q9NXD2-3|MTMR10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7805480957031	2	494.782359	987.550165	-0.3637	-0.00017995	-3.733	-0.001847	-4.0967	-0.002027	494.78036117734723	86.114	3.3197	86.558	85.468	88.787	0.44331					170	80	3	0	0	0	0.87922	1	10127	10127		31.955	4.0726	1	514260	+		42075	30006	28084	28097	47785	47785					0.05589180025708629
PNFKLKQN	8	Unmodified	_PNFKLKQN_					0	0	0			REV__nc|ENSG00000166912|Q9NXD2-3|MTMR10	REV__nc|ENSG00000166912|Q9NXD2-3|MTMR10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7805480957031	2	494.782359	987.550165	-0.78615	-0.00038897	-3.2604	-0.0016132	-4.0465	-0.0020021	494.78060020608814	86.18	3.7368	86.627	85.355	89.092	0.44736					160	91	3	0	0	0	0.884	1	10130	10130		33.516	1.5607	1	656610	+		42076	30006	28084	28097	47786	47786					0.05589180025708629
PNFLTVQVTG	10	Unmodified	_PNFLTVQVTG_					0	0	0			REV__nc|ENSG00000005238|Q7L5A3-3|ATOSB	REV__nc|ENSG00000005238|Q7L5A3-3|ATOSB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326904296875	2	538.292756	1074.57096	-1.4903	-0.00080223	2.7535	0.0014822	1.2632	0.00067999	538.2942723629616	100.62	0.13012	100.79	100.72	100.85	0.17199					4	2	2	0	0	0	0.37624	1	10464	10464		23.523	7.0495	1	65382	+		42077	16081	28085	28098	47787	47787					0.036657256147236694
PNGAGDQQGH	10	Unmodified	_PNGAGDQQGH_					0	0	0			REV__ENSG00000179046|ENST00000682553|TRIML2	REV__ENSG00000179046|ENST00000682553|TRIML2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.71356201171875	2	490.712662	979.410771	0.46701	0.00022917	1.0874	0.00053362	1.5545	0.00076279	490.7133417262937	95.947	1.8864	96.351	95.769	97.655	0.40451					153	45	6	0	0	0	0.80179	1	11551	11551		39.253	0.23134	1	6523800	+		42078	15829	28086	28099	47788	47788					-0.07975809329604999
PNGALKKS	8	Unmodified	_PNGALKKS_					0	0	0		ENST00000610160.1_1_20:31291624-31315937:-|nuORF;nc|ENSG00000149600|Q86VX2-2|COMMD7;ENSG00000149600|ENST00000278980|COMMD7	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.7409362792969	2	407.742702	813.470852	1.4003	0.00057095	-3.4227	-0.0013956	-2.0224	-0.00082463	407.7411625690843	24.068	0.6881	23.555	23.28	23.968	-0.51365					37	15	3	0	0	0	0.89494	1	1149	1149		37.159	12.956	1	299450			42079	14495	28087	28100	47789	47789					0.05665533071567097
PNGFDLGK	8	Unmodified	_PNGFDLGK_					0	0	0		nc|ENSG00000117360|O43395-3|PRPF3	nc|ENSG00000117360|O43395-3|PRPF3	nc|ENSG00000117360|O43395-3|PRPF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.2181091308594	2	424.21906	846.423567	-1.7078	-0.00072449	0.68599	0.00029101	-1.0218	-0.00043348	424.2192991334227	101.86	1.3095	102.06	101.54	102.85	0.19484					57	31	2	0	0	0	0.87922	1	10738	10738		31.955	0	1	1022300			42080	14862	28088	28101	47790	47790					-0.005787461994145815
PNGLAIDH	8	Unmodified	_PNGLAIDH_					0	0	0		ENSG00000123384|ENST00000243077|LRP1	ENSG00000123384|ENST00000243077|LRP1	ENSG00000123384|ENST00000243077|LRP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.2973937988281	2	418.716685	835.418816	-0.18812	-7.8769E-05	-0.9069	-0.00037973	-1.095	-0.0004585	418.71629136763835	72.25	0.13805	72.287	72.197	72.335	0.037148					7	4	2	0	0	0	0.4196	1	6860	6860		18.324	6.1176	1	40513			42081	3271	28089	28102	47791	47791					-0.005476303421914963
PNGLLKPL	8	Unmodified	_PNGLLKPL_					0	0	0			REV__ENST00000472298.1_1_13:32981593-33002081:-|nuORF	REV__ENST00000472298.1_1_13:32981593-33002081:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2948913574219	2	426.271096	850.527639	-0.18312	-7.8058E-05	2.2645	0.00096531	2.0814	0.00088725	426.27231617193115	73.066	0.11023	73.106	73.046	73.156	0.040024					5	3	2	0	0	0	0.4196	1	6970	6970		33.516	11.813	1	18753	+		42082	27256	28090	28103	47792	47792					0.09639580628083877
PNGLVLLL	8	Unmodified	_PNGLVLLL_					0	0	0			REV__ENST00000571914.1_1_17:79604263-79604362:+|nuORF	REV__ENST00000571914.1_1_17:79604263-79604362:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.77508544921875	2	419.773471	837.53239	2.2196	0.00093172	1.7406	0.00073065	3.9602	0.0016624	419.7741067165764	52.137	1.9692	52.15	50.995	52.964	0.01244					76	47	2	0	0	0	0.87276	1	4500	4500		29.842	0	1	186930	+		42083	28934	28091	28104	47793	47793					0.10712464770847419
PNGLVVLL	8	Unmodified	_PNGLVVLL_					0	0	0			REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|137|3|sense	REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|137|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76678466796875	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.82464	1	2104	2104		21.702	2.3424	1	1619400	+		42084	29618	28092	28105	47794	47794					0.09792178253815109
PNGSAILH	8	Unmodified	_PNGSAILH_					0	0	0		ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.7189025878906	2	404.719227	807.423902	-1.4523	-0.00058778	0.29127	0.00011788	-1.161	-0.00046989	404.7191322810213	74.551	0.59695	74.637	74.307	74.904	0.085907					30	21	2	0	0	0	0.91977	1	6875	6875		45.952	0	1	64818			42085	3006	28093	28106	47795	47795					0.012486735204333854
PNGSMLLR	8	Unmodified	_PNGSMLLR_					0	0	0		ENSG00000186567|ENST00000358777|CEACAM19;nc|ENSG00000186567|Q7Z692|CEACAM19;ENST00000480278.5_1_19:45175875-45176985:+|nuORF;nc|ENSG00000186567|Q7Z692-2|CEACAM19	ENSG00000186567|ENST00000358777|CEACAM19	ENSG00000186567|ENST00000358777|CEACAM19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	444.24554443359375	2	444.242012	886.469472	4.6482	0.0020649	1.9498	0.00086619	6.598	0.0029311	444.2433981750653	107.05	1.0816	107.19	106.83	107.92	0.14929					101	39	5	0	0	0	0.85277	1	13064	13064		25.45	0	1	5789800			42086	7805	28094	28107	47796	47796					0.021695757111729108
PNHRPGSL	8	Unmodified	_PNHRPGSL_					0	0	0			REV__chr6:149969360-149970016|42|21.64|0.73|4.88|+|1|ULBP1,ULBP1|1	REV__chr6:149969360-149970016|42|21.64|0.73|4.88|+|1|ULBP1,ULBP1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2355651855469	2	439.235576	876.456599	-0.81334	-0.00035725	1.0235	0.00044957	0.21018	9.2317E-05	439.2359205926715	27.517	1.1763	27.341	26.971	28.147	-0.17559					58	26	5	0	0	0	0.90983	1	1596	1596		42.396	5.237	1	693140	+		42087	15875	28095	28108	47797	47797					0.013428806432898455
PNHRPGSL	8	Unmodified	_PNHRPGSL_					0	0	0			REV__chr6:149969360-149970016|42|21.64|0.73|4.88|+|1|ULBP1,ULBP1|1	REV__chr6:149969360-149970016|42|21.64|0.73|4.88|+|1|ULBP1,ULBP1|1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	439.235576	876.456599	-0.81334	-0.00035725	1.0235	0.00044957	0.21018	9.2317E-05	439.2359205926715	27.517	1.1763	27.341	26.971	28.147	-0.17559	0.02056	0.00097983	NaN	42.396	58	26	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	693140	+		42088	15875	28095	28108							0.013428806432898455
PNHSLKLE	8	Unmodified	_PNHSLKLE_					0	0	0			REV__ENSG00000136457|ENST00000508540|CHAD	REV__ENSG00000136457|ENST00000508540|CHAD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	469.2588806152344	2	469.258717	936.50288	-0.21471	-0.00010075	0.56692	0.00026603	0.35221	0.00016528	469.258843652114	25.622	0.74992	25.589	25.307	26.057	-0.032125					48	23	3	0	0	0	0.92457	1	1042	1042		47.916	3.3845	1	142410	+		42089	19312	28096	28109	47798	47798					0.032089007547028814
PNIGIIVI	8	Unmodified	_PNIGIIVI_					0	0	0			REV__ENST00000543961.1_1_12:25956587-25956887:+|nuORF	REV__ENST00000543961.1_1_12:25956587-25956887:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77471923828125	2	419.773471	837.53239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.366	1	52.342	51.842	52.842	-0.023849								0	0	0	0.29694	1	4627	4627		37.028	0	1		+		42090	19539	28097	28110	47799	47799					0.10712464770847419
PNIKIIVILG	10	Unmodified	_PNIKIIVILG_					0	0	0			REV__ENSG00000186119|ENST00000333976|OR5D18	REV__ENSG00000186119|ENST00000333976|OR5D18	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.3630981445312	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.588	1	44.597	44.097	45.097	0.0084534								0	0	0	0.45132	1	3154	3154		16.473	3.514	1		+		42091	22824	28098	28111	47800	47800					0.17520929338934366
PNIKLKRQKS	10	Unmodified	_PNIKLKRQKS_					0	0	0			REV__ENSG00000124203|ENST00000371030|ZNF831	REV__ENSG00000124203|ENST00000371030|ZNF831	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.5895080566406	3	404.59094	1210.75099	-0.19379	-7.8407E-05	-4.1135	-0.0016643	-4.3073	-0.0017427	404.5891664662758	39.222	1.192	39.169	38.578	39.77	-0.052727					84	33	3	0	0	0	0.86647	1	2392	2392		28.577	4.3449	1	333770	+		42092	18568	28099	28112	47801	47801					0.15404449342349835
PNILIKFRY	9	Unmodified	_PNILIKFRY_					0	0	0			REV__ENSG00000178460|ENST00000422365|MCMDC2	REV__ENSG00000178460|ENST00000422365|MCMDC2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3541259765625	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.47	1	115.45	114.95	115.95	-0.02433								0	0	0	0.31828	1	12787	12787		24.203	2.2429	1		+		42093	22280	28100	28113	47802	47802					0.11142874536380987
PNILITLV	8	Unmodified	_PNILITLV_					0	0	0			REV__nc|ENSG00000070614|P52848-3|NDST1	REV__nc|ENSG00000070614|P52848-3|NDST1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.78790283203125	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.80963	1	3731	3731		15.636	0.97212	1	539980	+		42094	16607	28101	28114	47803	47803					0.11308733942337312
PNILRGCA	8	Unmodified	_PNILRGCA_					0	0	0		ENST00000325279.4_1_16:84693236-84695736:+|nuORF	ENST00000325279.4_1_16:84693236-84695736:+|nuORF	ENST00000325279.4_1_16:84693236-84695736:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2273864746094	2	422.228905	842.443257	-0.188	-7.9378E-05	-1.9035	-0.0008037	-2.0915	-0.00088307	422.22800326383765	64.571	1.1453	64.57	64.134	65.279	-0.00078583					74	34	3	0	0	0	0.81548	1	5994	5994		20.482	0	1	496030			42095	10069	28102	28115	47804	47804					0.015733065396716484
PNIPLAPEKK	10	Unmodified	_PNIPLAPEKK_					0	0	0		nc|ENSG00000155966|P51816-7|AFF2;nc|ENSG00000155966|P51816-2|AFF2;nc|ENSG00000155966|P51816-6|AFF2;nc|ENSG00000155966|P51816-3|AFF2;nc|ENSG00000155966|P51816-5|AFF2;ENSG00000155966|ENST00000370460|AFF2	nc|ENSG00000155966|P51816-7|AFF2	nc|ENSG00000155966|P51816-7|AFF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8298950195312	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.86587	1	8650	8650		29.17	2.4771	1	1181400			42096	5354	28103	28116	47805	47805					0.10094577919812764
PNITKLII	8	Unmodified	_PNITKLII_					0	0	0		nc|ENSG00000092203|O94842-3|TOX4;nc|ENSG00000092203|O94842-2|TOX4;ENSG00000092203|ENST00000448790|TOX4	nc|ENSG00000092203|O94842-3|TOX4	nc|ENSG00000092203|O94842-3|TOX4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3009033203125	2	456.299853	910.585153	-1.7927	-0.00081802	3.97	0.0018115	2.1773	0.00099349	456.30151188064457	45.052	1.9056	45.052	44.154	46.06	0					117	46	3	0	0	0	0.87479	1	3313	3313		30.504	3.7075	1	498210			42097	1695	28104	28117	47806	47806					0.1262842283365444
PNIVVPPEVVA	11	Unmodified	_PNIVVPPEVVA_					0	0	0		nc|ENSG00000105695|P20916-3|MAG;ENSG00000105695|ENST00000392213|MAG;nc|ENSG00000105695|P20916-2|MAG	nc|ENSG00000105695|P20916-3|MAG	nc|ENSG00000105695|P20916-3|MAG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3305053710938	2	567.331882	1132.64921	0.48094	0.00027285	-3.8594	-0.0021896	-3.3785	-0.0019167	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.89643	1	9126	9126		2.9294	1.6018	1	6590100			42098	2242	28105	28118	47807	47807					0.0881915819995811
PNKIIKHY	8	Unmodified	_PNKIIKHY_					0	0	0			REV__nc|ENSG00000169925|Q15059-2|BRD3	REV__nc|ENSG00000169925|Q15059-2|BRD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	507.3017578125	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.86288	1	3320	3320		26.796	7.4361	1	412810	+		42099	21617	28106	28119	47808	47808					0.08122056922411502
PNKLKFIHRR	10	Unmodified	_PNKLKFIHRR_					0	0	0			REV__ENSG00000157259|ENST00000287957|GATAD1	REV__ENSG00000157259|ENST00000287957|GATAD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.93988037109375	3	436.938562	1307.79386	-0.36541	-0.00015966	2.909	0.0012711	2.5436	0.0011114	436.93986861575377	52.649	0.95123	53.072	52.681	53.632	0.42348					63	22	4	0	0	0	0.8492	1	5288	5288		18.531	0.69791	1	826520	+		42100	20538	28107	28120	47809	47809					0.15227264190434653
PNKPGRYDVD	10	Unmodified	_PNKPGRYDVD_					0	0	0			REV__ENST00000509517.1_1_4:146067334-146072008:-|nuORF	REV__ENST00000509517.1_1_4:146067334-146072008:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.7905883789062	2	580.78837	1159.56219	-0.42668	-0.00024781	4.1138	0.0023892	3.6871	0.0021414	580.7906128619697	19.702	1.115	19.232	18.974	20.089	-0.46967					60	23	3	0	0	0	0.86047	1	585	585		23.523	0.94304	1	396860	+		42101	21042	28108	28121	47810	47810					-0.01121248021786414
PNKQKPTCLTL	11	Unmodified	_PNKQKPTCLTL_					0	0	0			REV__ENST00000504771.2_1_5:118691768-118728606:+|nuORF	REV__ENST00000504771.2_1_5:118691768-118728606:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.7955932617188	2	621.847373	1241.68019	-0.35647	-0.00022167	-4.157	-0.002585	-4.5135	-0.0028067	622.3473059033967	56.911	0.12626	57.308	57.203	57.329	0.39672					4	2	2	0	0	0	0.17383	1	5879	5879		24.519	9.6543	1	48948	+		42102	27867	28109	28122	47811	47811					0.06901988242520929
PNKRKCAIIR	10	Unmodified	_PNKRKCAIIR_					0	0	0			REV__nc|ENSG00000169083|P10275-2|AR	REV__nc|ENSG00000169083|P10275-2|AR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2436218261719	3	400.244887	1197.71283	2.0925	0.0008375	-4.3392	-0.0017367	-2.2467	-0.00089924	400.24300696883114	21.638	0.9388	21.195	20.915	21.854	-0.44324					60	21	4	0	0	0	0.86225	1	794	794		32.751	3.1998	1	282770	+		42103	21546	28110	28123	47812	47812					0.12188240156024222
PNKRLIQIAV	10	Unmodified	_PNKRLIQIAV_					0	0	0			REV__nc|ENSG00000162551|P05186-2|ALPL	REV__nc|ENSG00000162551|P05186-2|ALPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3687133789062	2	576.36659	1150.71863	0.5205	0.0003	4.1404	0.0023864	4.6609	0.0026864	576.3688108191589	39.411	1.3074	39.422	39.01	40.317	0.010704					81	33	3	0	0	0	0.85466	1	2400	2400		20.947	6.0821	1	325270	+		42104	20820	28111	28124	47813	47813					0.14929661939368088
PNKVVVMPG	9	Unmodified	_PNKVVVMPG_					0	0	0		ENSG00000112139|ENST00000434837|MDGA1;ENST00000373401.2_1_6:37605146-37606471:-|nuORF	ENSG00000112139|ENST00000434837|MDGA1	ENSG00000112139|ENST00000434837|MDGA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7690124511719	2	470.767863	939.521173	-1.5754	-0.00074164	4.4734	0.002106	2.8981	0.0013643	470.7698262584641	54.969	1.6886	54.969	54.144	55.833	0					124	54	3	0	0	0	0.67235	1	4650	4650		42.474	1.9018	1	1398900			42105	2634	28112	28125	47814	47814					0.04899319405069491
PNLAAILL	8	Unmodified	_PNLAAILL_					0	0	0		ENST00000529980.5_1_11:47159254-47177376:+|nuORF	ENST00000529980.5_1_11:47159254-47177376:+|nuORF	ENST00000529980.5_1_11:47159254-47177376:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7667541503906	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.81548	1	2455	2455		20.482	0	1	2034000			42106	13335	28113	28126	47815	47815					0.09792178253815109
PNLAKIYR	8	Unmodified	_PNLAKIYR_					0	0	0			REV__ENSG00000188649|ENST00000646931|CC2D2B	REV__ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7915344238281	2	487.792727	973.5709	-1.0855	-0.00052952	-3.4554	-0.0016855	-4.541	-0.0022151	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.80706	1	7591	7591		19.36	1.0356	1	309700	+		42107	23020	28114	28127	47816	47816					0.08305770405377189
PNLAKIYR	8	Unmodified	_PNLAKIYR_					0	0	0			REV__ENSG00000188649|ENST00000646931|CC2D2B	REV__ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7906188964844	2	487.792727	973.5709	-0.70733	-0.00034503	-3.6605	-0.0017856	-4.3678	-0.0021306	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.89962	1	8153	8153		38.806	10.924	1	2348200	+		42108	23020	28114	28127	47817	47817					0.08305770405377189
PNLAKIYR	8	Unmodified	_PNLAKIYR_					0	0	0			REV__ENSG00000188649|ENST00000646931|CC2D2B	REV__ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7908935546875	2	487.792727	973.5709	-0.48923	-0.00023864	-3.7823	-0.001845	-4.2716	-0.0020836	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.87922	1	9709	9709		31.955	6.5047	1	1599600	+		42109	23020	28114	28127	47818	47818					0.08305770405377189
PNLARQAN	8	Unmodified	_PNLARQAN_					0	0	0		L1PA11_dup257|chr1:220255199-220257096:+|6.83625221169232|0.4810012897383803|3.83|63.0|51|3|sense;L1P2_dup554|chr5:118974817-118975709:-|2.0888004340180686|0.1408758943517007|3.89|63.0|25|3|sense;L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|137|3|sense;nc|ENSG1000|Q9UN81|L1_ORF1;L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|51|2|sense	L1PA11_dup257|chr1:220255199-220257096:+|6.83625221169232|0.4810012897383803|3.83|63.0|51|3|sense	L1PA11_dup257|chr1:220255199-220257096:+|6.83625221169232|0.4810012897383803|3.83|63.0|51|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2403869628906	2	442.240858	882.467164	0.21245	9.3954E-05	-0.1421	-6.2841E-05	0.070351	3.1112E-05	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.90465	1	9290	9290		40.573	8.6178	1	1030200			42110	14607	28115	28128	47819	47819					0.021228632976999506
PNLFRSTSTVR	11	Unmodified	_PNLFRSTSTVR_					0	0	0			REV__ENSG00000153802|ENST00000283916|TMPRSS11D	REV__ENSG00000153802|ENST00000283916|TMPRSS11D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3584594726562	2	639.351668	1276.68878	3.0904	0.0019759	0.37302	0.00023849	3.4634	0.0022144	640.3567163045125	99.066	2.3862	99.429	98.727	101.11	0.36292					195	59	5	0	0	0	0.45992	1	12057	12057		54.722	13.296	1	1604000	+		42111	20357	28116	28129	47820	47820					0.06150678203357529
PNLGCRAL	8	Unmodified	_PNLGCRAL_					0	0	0			REV__ENSG00000184451|ENST00000332438|CCR10	REV__ENSG00000184451|ENST00000332438|CCR10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2278747558594	2	422.228905	842.443257	-1.6279	-0.00068734	-0.39693	-0.00016759	-2.0248	-0.00085493	422.2286431542634	57.254	2.0219	57.254	56.929	58.951	0					133	84	2	0	0	0	0.86791	1	4919	4919		28.254	0	1	766060	+		42112	22678	28117	28130	47821	47821					0.015733065396602797
PNLGIREV	8	Unmodified	_PNLGIREV_					0	0	0		ENST00000371933.7_1_1:47143286-47143442:-|nuORF	ENST00000371933.7_1_1:47143286-47143442:-|nuORF	ENST00000371933.7_1_1:47143286-47143442:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2597961425781	2	449.261259	896.507966	-1.3059	-0.00058669	-0.46348	-0.00020822	-1.7694	-0.00079491	449.2608709500843	73.271	0.46545	73.4	73.031	73.496	0.1292					30	18	2	0	0	0	0.85277	1	6729	6729		25.45	0	1	216530			42113	10680	28118	28131	47822	47822					0.05557204617332445
PNLHALSK	8	Unmodified	_PNLHALSK_					0	0	0		ENST00000496105.1_1_3:113169108-113212968:-|nuORF;ENSG00000163611|ENST00000295872|SPICE1	ENST00000496105.1_1_3:113169108-113212968:-|nuORF	ENST00000496105.1_1_3:113169108-113212968:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2555236816406	2	440.255977	878.497401	-0.8618	-0.00037941	-0.60853	-0.00026791	-1.4703	-0.00064732	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.88601	1	6832	6832		34.173	8.7224	1	1365500			42114	5835	28119	28132	47823	47823					0.05329221962892916
PNLHLLAEG	9	Unmodified	_PNLHLLAEG_					0	0	0		nc|ENSG00000136830|Q96TA1-2|NIBAN2;ENSG00000136830|ENST00000373312|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	482.26873779296875	2	482.266542	962.51853	0.81049	0.00039087	2.209	0.0010653	3.0194	0.0014562	482.2672746752671	22.365	0.65388	22.429	22.063	22.717	0.064745					38	23	2	0	0	0	0.76764	1	658	658		34.173	2.6427	1	39353			42115	4140	28120	28133	47824	47824					0.03577187271764615
PNLHLLAEG	9	Unmodified	_PNLHLLAEG_					0	0	0		nc|ENSG00000136830|Q96TA1-2|NIBAN2;ENSG00000136830|ENST00000373312|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	482.266542	962.51853	-0.27717	-0.00013367	3.41	0.0016446	3.1329	0.0015109	482.2679314414164	22.543	0.77575	22.484	22.19	22.966	-0.05867	0.022618	4.6598E-05	NaN	34.173	47	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46698			42116	4140	28120	28133							0.03577187271764615
PNLHLLAEG	9	Unmodified	_PNLHLLAEG_					0	0	0		nc|ENSG00000136830|Q96TA1-2|NIBAN2;ENSG00000136830|ENST00000373312|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	482.266542	962.51853	-0.95907	-0.00046253	4.2635	0.0020562	3.3045	0.0015936	482.26820824760347	22.528	0.65821	22.471	22.17	22.829	-0.057203	0.0096315	0.00086981	NaN	34.173	44	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38522			42117	4140	28120	28133							0.03577187271764615
PNLKLLAM	8	Unmodified	_PNLKLLAM_					0	0	0		ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1	ENSG00000101343|ENST00000536226|CRNKL1	ENSG00000101343|ENST00000536226|CRNKL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.27508544921875	2	450.272781	898.531009	1.3502	0.00060798	2.7486	0.0012376	4.0989	0.0018456	450.2740564660656	112.56	0.39562	112.59	112.42	112.81	0.030602					22	15	2	0	0	0	0.81548	1	13618	13618		20.482	2.1574	1	71369			42118	1933	28121	28134	47825	47825					0.07768507410446546
PNLKVIEPKIM	11	Unmodified	_PNLKVIEPKIM_					0	0	0		ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.18084716796875	3	427.92482	1280.75263	1.8223	0.0007798	-0.083547	-3.5752E-05	1.7387	0.00074404	427.92471347961134	102.32	0.59815	102.59	102.31	102.91	0.26322					34	14	3	0	0	0	0.17243	1	12452	12452		28.577	12.047	1	251300			42119	9187	28122	28135	47826	47826					0.12348322316120175
PNLKVIEPKIM	11	Unmodified	_PNLKVIEPKIM_					0	0	0		ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	427.92482	1280.75263	-0.96634	-0.00041352	3.703	0.0015846	2.7366	0.0011711	427.92618585642094	102.92	0.9045	102.92	102.13	103.04	0	0.21199	0.0052137	NaN	22.562	28	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252990			42120	9187	28122	28135							0.12348322316120175
PNLKVIEPKIM	11	Unmodified	_PNLKVIEPKIM_					0	0	0		ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	427.92482	1280.75263	2.718	0.0011631	-0.57372	-0.00024551	2.1442	0.00091757	427.92449884727614	102.81	1.0284	102.76	102.38	103.4	-0.047005	0.05652	-0.00027658	NaN	22.562	59	24	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	654550			42121	9187	28122	28135							0.12348322316120175
PNLKVIEPKIM	11	Unmodified	_PNLKVIEPKIM_					0	0	0		ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	427.92482	1280.75263	2.6541	0.0011357	-0.52528	-0.00022478	2.1288	0.00091096	427.9244930199993	102.67	1.1013	102.71	102.34	103.44	0.043198	0.0096001	-0.00021439	NaN	22.562	49	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	583110			42122	9187	28122	28135							0.12348322316120175
PNLKVIEPKIM	11	Unmodified	_PNLKVIEPKIM_					0	0	0		ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	427.92482	1280.75263	-1.6528	-0.00070727	4.1678	0.0017835	2.515	0.0010762	427.92632777923035	102.47	1.2974	102.66	101.8	103.1	0.19484	-0.041556	0.0058104	NaN	22.562	59	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	355870			42123	9187	28122	28135							0.12348322316120175
PNLKVIEPKIM	11	Unmodified	_PNLKVIEPKIM_					0	0	0		ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	ENST00000225388.8_1_17:27585167-27585341:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	427.92482	1280.75263	0.734	0.00031409	1.7457	0.00074704	2.4797	0.0010611	427.9252878398451	102.43	1.474	102.57	101.55	103.02	0.13522	-0.13502	0.0027011	NaN	22.562	52	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299240			42124	9187	28122	28135							0.12348322316120175
PNLLLSVL	8	Unmodified	_PNLLLSVL_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.85277	1	2156	2156		25.45	4.9683	1	4737100	+		42125	23882	28123	28136	47827	47827					0.10388447425293634
PNLLRIMPAV	10	Unmodified	_PNLLRIMPAV_					0	0	0		ENST00000417497.5_1_22:28393691-28395609:+|nuORF;ENST00000454741.5_1_22:28394730-28395609:+|nuORF	ENST00000417497.5_1_22:28393691-28395609:+|nuORF	ENST00000417497.5_1_22:28393691-28395609:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.3375854492188	2	562.336444	1122.65834	0.62923	0.00035384	2.6389	0.0014839	3.2681	0.0018378	562.3377185634861	16.893	0.51688	16.282	15.958	16.475	-0.6107					19	11	2	0	0	0	0.85939	1	189	189		23.042	1.0826	1	104890			42126	11411	28124	28137	47828	47828					0.10191228284611498
PNLLVVIERGR	11	Unmodified	_PNLLVVIERGR_					0	0	0			REV__nc|ENSG00000172954|Q6UWP7|LCLAT1	REV__nc|ENSG00000172954|Q6UWP7|LCLAT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5926513671875	3	422.594461	1264.76155	-1.6666	-0.00070429	-1.2985	-0.00054872	-2.965	-0.001253	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.77205	1	4616	4616		17.167	1.8293	1	771770	+		42127	30034	28125	28138	47829	47829					0.13976431996775318
PNLMPAVSTS	10	Oxidation (M)	_PNLM(Oxidation (M))PAVSTS_		PNLM(1)PAVSTS		PNLM(44)PAVSTS	0	0	1			REV__ENSG00000197706|ENST00000343399|OR6C74	REV__ENSG00000197706|ENST00000343399|OR6C74	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7589721679688	2	516.755149	1031.49575	0.68105	0.00035194	-4.3526	-0.0022492	-3.6715	-0.0018973	516.7528621165293	66.309	0.95288	66.695	66.283	67.236	0.38581					46	25	3	0	0	0	0.71042	1	7252	7252		44.117	8.9648	1	265940	+		42128	23262	28126	28139	47830	47830		355			-0.018741999080248206
PNLMPAVSTS	10	Oxidation (M)	_PNLM(Oxidation (M))PAVSTS_					0	0	1			REV__ENSG00000197706|ENST00000343399|OR6C74	REV__ENSG00000197706|ENST00000343399|OR6C74	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	516.755149	1031.49575	0.68105	0.00035194	-4.3526	-0.0022492	-3.6715	-0.0018973	516.7528621165293	66.309	0.95288	66.695	66.283	67.236	0.38581	-0.038915	-0.00069979	NaN	44.117	46	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	265940	+		42129	23262	28126	28139				355			-0.018741999080248206
PNLPPTPTPLV	11	Unmodified	_PNLPPTPTPLV_					0	0	0		ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	ENSG00000080573|ENST00000264828|COL5A3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	573.3314208984375	2	573.331882	1144.64921	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.337	1	29.348	28.848	29.848	0.01123								0	0	0	0.56276	1	1237	1237		30.318	2.4355	1				42130	1446	28127	28140	47831	47831					0.08267158199919322
PNLPYLLDGKN	11	Unmodified	_PNLPYLLDGKN_					0	0	0		ENST00000488824.1_1_1:110279695-110282569:-|nuORF;ENSG00000134202|ENST00000361066|GSTM3	ENST00000488824.1_1_1:110279695-110282569:-|nuORF	ENST00000488824.1_1_1:110279695-110282569:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	622.3361206054688	2	622.337695	1242.66084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.41	1	110.4	109.9	110.9	-0.0074387								0	0	0	0.56276	1	11769	11769		44.377	11.565	1				42131	3915	28128	28141	47832	47832					0.04921355223291357
PNLQKILEVST	11	Unmodified	_PNLQKILEVST_					0	0	0			REV__nc|ENSG00000115896|Q15111-2|PLCL1	REV__nc|ENSG00000115896|Q15111-2|PLCL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.2958374023438	2	621.358628	1240.7027	0.98193	0.00061013	3.1918	0.0019832	4.1737	0.0025934	621.3601737736437	67.626	0.8858	68.011	67.559	68.445	0.38515					37	21	2	0	0	0	0.17472	1	7367	7367		18.262	0	1	294260	+		42132	18159	28129	28142	47833	47833					0.09197910911802865
PNLRAVRA	8	Unmodified	_PNLRAVRA_					0	0	0			REV__nc|ENSG00000139637|Q9HB07|MYG1	REV__nc|ENSG00000139637|Q9HB07|MYG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.7737121582031	2	448.774868	895.535184	0.24226	0.00010872	3.7342	0.0016758	3.9764	0.0017845	448.77645139192583	41.32	1.2151	41.289	41.029	42.244	-0.030991					57	30	2	0	0	0	0.884	1	3034	3034		33.516	8.0654	1	330210	+		42133	19557	28130	28143	47834	47834					0.08323732948372253
PNLRLTVPI	9	Unmodified	_PNLRLTVPI_					0	0	0			REV__ENSG00000114650|ENST00000265565|SCAP;REV__nc|ENSG00000114650|Q12770-2|SCAP	REV__ENSG00000114650|ENST00000265565|SCAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.82061767578125	2	511.821484	1021.62842	0.084132	4.306E-05	-1.1749	-0.00060134	-1.0908	-0.00055828	511.82074825057515	79.493	0.72359	79.91	79.614	80.338	0.41621					50	16	4	0	0	0	0.78058	1	9130	9130		30.504	0	1	1233800	+		42134	18058;29792	28131	28144	47835	47835					0.11846612610929697
PNLSKSYSL	9	Unmodified	_PNLSKSYSL_					0	0	0			REV__ENSG00000166189|ENST00000299238|HPS6	REV__ENSG00000166189|ENST00000299238|HPS6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.8172912597656	2	504.771657	1007.52876	2.3366	0.0011795	1.5292	0.00077189	3.8658	0.0019513	504.77235296390126	99.077	0.78387	99.44	99.094	99.878	0.36292					39	19	3	0	0	0	0.20789	1	12045	12045		44.117	1.7207	1	539090	+		42135	21265	28132	28145	47836	47836					0.025297502063381216
PNLSNLEEF	9	Unmodified	_PNLSNLEEF_					0	0	0		nc|ENSG00000140326|Q8IWY9-1|CDAN1;ENSG00000140326|ENST00000356231|CDAN1	nc|ENSG00000140326|Q8IWY9-1|CDAN1	nc|ENSG00000140326|Q8IWY9-1|CDAN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7589111328125	2	531.758746	1061.50294	0.042754	2.2735E-05	0.14793	7.8661E-05	0.19068	0.0001014	531.7586541622943	82.951	0.91053	83.425	83.003	83.913	0.47383					54	21	3	0	0	0	0.64922	1	9630	9630		44.117	4.864	1	1218800			42136	4426	28133	28146	47837	47837					-0.02535144035960002
PNLTKVAAM	9	Unmodified	_PNLTKVAAM_					0	0	0			REV__nc|ENSG00000146731|P40227-2|CCT6A	REV__nc|ENSG00000146731|P40227-2|CCT6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.76727294921875	2	472.76532	943.516088	-0.10807	-5.1094E-05	4.2312	0.0020003	4.1231	0.0019493	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.77244	1	8418	8418		32.812	6.1195	1	501240	+		42137	20030	28134	28147	47838	47838					0.04207015542442605
PNLTKVAAM	9	Unmodified	_PNLTKVAAM_					0	0	0			REV__nc|ENSG00000146731|P40227-2|CCT6A	REV__nc|ENSG00000146731|P40227-2|CCT6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7677307128906	2	472.76532	943.516088	0.45435	0.0002148	3.2736	0.0015477	3.728	0.0017625	472.7668500235695	81.593	2.4119	81.53	80.267	82.679	-0.062935					139	57	4	0	0	0	0.7932	1	8296	8296		25.574	4.6271	1	232880	+		42138	20030	28134	28147	47839	47839					0.04207015542442605
PNLTKVAAM	9	Unmodified	_PNLTKVAAM_					0	0	0			REV__nc|ENSG00000146731|P40227-2|CCT6A	REV__nc|ENSG00000146731|P40227-2|CCT6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.76727294921875	2	472.76532	943.516088	0.74188	0.00035074	3.3813	0.0015986	4.1232	0.0019493	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.69624	2	8677	8677;8737		40.778	8.8233	1	547170	+		42139	20030	28134	28147	47840;47841	47840					0.04207015542442605
PNLTLIDLI	9	Unmodified	_PNLTLIDLI_					0	0	0			REV__ENST00000393561.5_1_7:107626526-107626663:-|nuORF	REV__ENST00000393561.5_1_7:107626526-107626663:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30877685546875	2	506.307875	1010.6012	0.256	0.00012961	2.4888	0.0012601	2.7448	0.0013897	506.3090682928902	39.296	1.1693	39.385	39.034	40.203	0.088375					50	30	2	0	0	0	0.76255	1	2401	2401		35.618	3.6634	1	127350	+		42140	26059	28135	28148	47842	47842					0.09632084279917308
PNLTRFLQ	8	Unmodified	_PNLTRFLQ_					0	0	0			REV__ENST00000441308.1_1_20:10367413-10367935:+|nuORF	REV__ENST00000441308.1_1_20:10367413-10367935:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.77996826171875	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.87479	1	8212	8212		30.504	2.2494	1	385180	+		42141	26753	28136	28149	47843	47843					0.05589180025708629
PNLTRHLRN	9	Unmodified	_PNLTRHLRN_					0	0	0		ENSG00000196456|ENST00000329630|ZNF775	ENSG00000196456|ENST00000329630|ZNF775	ENSG00000196456|ENST00000329630|ZNF775	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8204345703125	2	560.820338	1119.62612	2.0312	0.0011391	-2.9645	-0.0016625	-0.93332	-0.00052343	560.8185510503406	92.547	2.8653	92.482	91.358	94.223	-0.06414					202	67	4	0	0	0	0.7932	1	9710	9710		24.519	0.31644	1	788180			42142	8059	28137	28150	47844	47844					0.07109576925836336
PNLTVVLL	8	Unmodified	_PNLTVVLL_					0	0	0			REV__ENSG00000184344|ENST00000329913|GDF3	REV__ENSG00000184344|ENST00000329913|GDF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7792053222656	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.80706	1	2949	2949		19.36	0	1	2938700	+		42143	22664	28138	28151	47845	47845					0.10388447425293634
PNLVIVIG	8	Unmodified	_PNLVIVIG_					0	0	0			REV__ENSG00000121314|ENST00000240615|TAS2R8	REV__ENSG00000121314|ENST00000240615|TAS2R8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7670593261719	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.86791	1	2911	2911		28.254	6.2944	1	681490	+		42144	18450	28139	28152	47846	47846					0.0979217825380374
PNLVIVIG	8	Unmodified	_PNLVIVIG_					0	0	0			REV__ENSG00000121314|ENST00000240615|TAS2R8	REV__ENSG00000121314|ENST00000240615|TAS2R8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2676696777344	2	412.765646	823.516739	-0.42213	-0.00017424	3.8155	0.0015749	3.3934	0.0014007	412.76760423749965	45.997	3.0028	45.918	44.545	47.548	-0.079002					179	83	3	0	0	0	0.86791	1	3472	3472		28.254	6.5519	1	731020	+		42145	18450	28139	28152	47847	47847					0.0979217825380374
PNNATTANN	9	Unmodified	_PNNATTANN_					0	0	0			REV__nc|ENSG00000100731|Q96RV3-4|PCNX1	REV__nc|ENSG00000100731|Q96RV3-4|PCNX1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.787109375	2	458.709588	915.404623	1.7202	0.00078908	1.3095	0.00060068	3.0297	0.0013898	458.7090200709741	93.105	0.11914	93.043	92.968	93.087	-0.06144					4	2	2	0	0	0	0.20789	1	9869	9869		44.377	27.904	1	24412	+		42146	17217	28140	28153	47848	47848					-0.05646327561146336
PNNFEYCPACI	11	Unmodified	_PNNFEYCPACI_					0	0	0		ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.7847290039062	2	635.765191	1269.51583	3.0725	0.0019534	2.7031	0.0017185	5.7756	0.0036719	635.7669195924055	24.6	0.49126	24.087	23.835	24.326	-0.51365					22	10	3	0	0	0	0.17376	1	1175	1175		26.063	0.48933	1	185190			42147	9179	28141	28154	47849	47849					-0.10814772239723425
PNNGPTGSV	9	Unmodified	_PNNGPTGSV_					0	0	0		ENST00000461159.6_1_7:18330122-18868840:+|nuORF;nc|ENSG00000048052|Q9UKV0-4|HDAC9;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;ENSG00000048052|ENST00000686413|HDAC9;nc|ENSG00000048052|Q9UKV0-11|HDAC9;nc|ENSG00000048052|Q9UKV0-9|HDAC9;nc|ENSG00000048052|Q9UKV0-10|HDAC9;nc|ENSG00000048052|Q9UKV0-8|HDAC9;nc|ENSG00000048052|Q9UKV0-3|HDAC9	ENST00000461159.6_1_7:18330122-18868840:+|nuORF	ENST00000461159.6_1_7:18330122-18868840:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.806640625	2	421.703774	841.392996	1.0305	0.00043458	-3.6906	-0.0015563	-2.6601	-0.0011218	421.70211469072063	19.124	0.3775	18.654	18.459	18.836	-0.46967					14	8	2	0	0	0	0.20789	1	496	496		6.3127	0	1	44980			42148	971	28142	28155	47850	47850					-0.034045245844708916
PNNVVFVTGNY	11	Unmodified	_PNNVVFVTGNY_					0	0	0		ENSG00000146834|ENST00000310512|MEPCE;nc|ENSG00000289690|Q7L2J0-2|MEPCE	ENSG00000146834|ENST00000310512|MEPCE	ENSG00000146834|ENST00000310512|MEPCE	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3292846679688	2	612.306395	1222.59824	0.69329	0.00042451	2.8076	0.0017191	3.5009	0.0021436	612.3080377990443	76.321	0.7614	76.721	76.284	77.045	0.39969					28	18	2	0	0	0	0.17347	1	8625	8625		29.17	3.596	1	182400			42149	4862	28143	28156	47851	47851					-0.004157908448860326
PNPAPIRFKVL	11	Unmodified	_PNPAPIRFKVL_					0	0	0		ENST00000470396.1_1_1:151238797-151239150:+|nuORF	ENST00000470396.1_1_1:151238797-151239150:+|nuORF	ENST00000470396.1_1_1:151238797-151239150:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3798217773438	2	626.38224	1250.74993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.37	1	116.3	115.8	116.8	-0.069672								0	0	0	0.56276	1	12498	12498		26.693	1.1189	1				42150	12221	28144	28157	47852	47852					0.1345823497345009
PNPARSRLVAI	11	Unmodified	_PNPARSRLVAI_					0	0	0		nc|ENSG00000077238|P24394-3|IL4R;ENSG00000077238|ENST00000395762|IL4R	nc|ENSG00000077238|P24394-3|IL4R	nc|ENSG00000077238|P24394-3|IL4R	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.3580932617188	2	597.359296	1192.70404	-0.24184	-0.00014447	-1.7236	-0.0010296	-1.9655	-0.0011741	597.3578636523395	100.56	3.0718	100.56	99.06	102.13	0					172	73	4	0	0	0	0.69248	1	10204	10204		32.751	4.669	1	2923800			42151	1376	28145	28158	47853	47853					0.11539589791232174
PNPARSRLVAI	11	Unmodified	_PNPARSRLVAI_					0	0	0		nc|ENSG00000077238|P24394-3|IL4R;ENSG00000077238|ENST00000395762|IL4R	nc|ENSG00000077238|P24394-3|IL4R	nc|ENSG00000077238|P24394-3|IL4R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.3582153320312	2	597.359296	1192.70404	-1.2979	-0.00077532	-0.78886	-0.00047123	-2.0868	-0.0012466	597.3583970456502	100.18	2.7493	100.35	98.666	101.42	0.17199					156	64	4	0	0	0	0.67778	2	10434	10363;10434		35.152	8.4591	1	2737400			42152	1376	28145	28158	47854;47855	47855					0.11539589791232174
PNPGPPTPPSA	11	Unmodified	_PNPGPPTPPSA_					0	0	0		ENST00000378536.4_1_1:2240916-2241354:+|nuORF	ENST00000378536.4_1_1:2240916-2241354:+|nuORF	ENST00000378536.4_1_1:2240916-2241354:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3143310546875	2	516.261456	1030.50836	1.8052	0.00093195	-0.19813	-0.00010229	1.6071	0.00082966	516.2590523113691	99.158	0.11334	99.52	99.447	99.561	0.36292					4	2	2	0	0	0	0.16675	1	12012	12012		56.434	15.007	1	61560			42153	10869	28146	28159	47856	47856					-0.005674204534670935
PNPKPKPPN	9	Unmodified	_PNPKPKPPN_					0	0	0			REV__ENST00000430562.6_1_X:2537498-2544672:+|nuORF	REV__ENST00000430562.6_1_X:2537498-2544672:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7801818847656	2	494.782359	987.550165	-0.60063	-0.00029718	-3.4065	-0.0016855	-4.0071	-0.0019826	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.74721	2	8532	8532;8594		37.159	4.3467	1	707910	+		42154	26403	28147	28160	47857;47858	47857					0.0558918002569726
PNPLGLPTKVA	11	Unmodified	_PNPLGLPTKVA_					0	0	0		ENSG00000095951|ENST00000379388|HIVEP1	ENSG00000095951|ENST00000379388|HIVEP1	ENSG00000095951|ENST00000379388|HIVEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8300170898438	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.66929	1	8903	8903		36.447	1.2947	1	1489800			42155	1734	28148	28161	47859	47859					0.10094577919812764
PNPPPTGPPTT	11	Unmodified	_PNPPPTGPPTT_					0	0	0			REV__nc|ENSG00000164244|Q96M27-4|PRRC1	REV__nc|ENSG00000164244|Q96M27-4|PRRC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3267822265625	2	538.274564	1074.53457	1.246	0.00067068	4.1327	0.0022245	5.3787	0.0028952	538.2766940341879	100.94	0.40273	100.99	100.82	101.22	0.046356					15	9	3	0	0	0	0.14589	1	10894	10894		61.691	31.374	1	147140	+		42156	21055	28149	28162	47860	47860					0.0002884871798869426
PNPRQLSQRR	10	Unmodified	_PNPRQLSQRR_					0	0	0		ENST00000519231.5_1_8:66693177-66754193:-|nuORF;nc|ENSG00000205268|Q13946-3|PDE7A;ENSG00000205268|ENST00000401827|PDE7A	ENST00000519231.5_1_8:66693177-66754193:-|nuORF	ENST00000519231.5_1_8:66693177-66754193:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3795776367188	2	626.355077	1250.6956	0.92576	0.00057985	1.6782	0.0010511	2.6039	0.001631	626.3567697796657	105.7	0.65057	105.81	105.43	106.08	0.10766					21	16	2	0	0	0	0.37624	1	11272	11272		23.523	0	1	443160			42157	8519	28150	28163	47861	47861					0.08028035874576744
PNPRRLSQLP	10	Unmodified	_PNPRRLSQLP_					0	0	0		ENST00000552032.6_1_12:70273098-70280606:+|nuORF	ENST00000552032.6_1_12:70273098-70280606:+|nuORF	ENST00000552032.6_1_12:70273098-70280606:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3431396484375	2	589.343646	1176.67274	2.472	0.0014569	-3.7901	-0.0022337	-1.3181	-0.00077681	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.86218	1	10206	10206		32.812	2.3088	1	16740000			42158	13675	28151	28164	47862	47862					0.09147016757151505
PNPRTLVHAA	10	Unmodified	_PNPRTLVHAA_					0	0	0		ENSG00000177363|ENST00000317449|LRRN4CL	ENSG00000177363|ENST00000317449|LRRN4CL	ENSG00000177363|ENST00000317449|LRRN4CL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3268432617188	2	538.30399	1074.59343	1.2458	0.00067063	-2.1799	-0.0011735	-0.9341	-0.00050283	538.8044111268892	101.66	0.17209	101.7	101.64	101.81	0.044823					5	3	2	0	0	0	0.37624	1	10978	10978		26.693	0	1	42396			42159	7134	28152	28165	47863	47863					0.05911369802993249
PNPYSHDFV	9	Unmodified	_PNPYSHDFV_					0	0	0			REV__ENSG00000165312|ENST00000376495|OTUD1	REV__ENSG00000165312|ENST00000376495|OTUD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3268432617188	2	538.245806	1074.47706	0.067789	3.6487E-05	-2.1709	-0.0011685	-2.1031	-0.001132	538.244978844133	100.83	0.15807	101.03	100.92	101.08	0.2058					5	3	2	0	0	0	0.20789	1	10543	10543		29.15	0	1	181370	+		42160	21173	28153	28166	47864	47864					-0.057199934875598046
PNQAVRFI	8	Unmodified	_PNQAVRFI_					0	0	0			REV__ENST00000554335.5_1_14:55255686-55255803:+|nuORF	REV__ENST00000554335.5_1_14:55255686-55255803:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7672119140625	2	472.769252	943.52395	-0.41041	-0.00019403	-3.7134	-0.0017556	-4.1238	-0.0019496	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.884	1	8473	8473		33.516	0.70317	1	590200	+		42161	28663	28154	28167	47865	47865					0.04992910854230104
PNQGVSCF	8	Unmodified	_PNQGVSCF_					0	0	0			REV__ENSG00000080511|ENST00000591589|RDH8	REV__ENSG00000080511|ENST00000591589|RDH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.1914978027344	2	426.189445	850.364338	1.2211	0.00052043	3.156	0.001345	4.3771	0.0018655	426.1908077193733	97.101	1.266	97.492	97.115	98.381	0.39065					86	30	4	0	0	0	0.884	1	11700	11700		33.516	6.7195	1	6288000	+		42162	16802	28155	28168	47866	47866					-0.06682965485265413
PNQINALVKLR	11	Unmodified	_PNQINALVKLR_					0	0	0			REV__chr14:22499749-22547506|32|16.12|0.0|20.62|+|2|TRAJ40,TRAC|1	REV__chr14:22499749-22547506|32|16.12|0.0|20.62|+|2|TRAJ40,TRAC|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.59283447265625	3	422.594461	1264.76155	-1.6666	-0.00070429	-1.2985	-0.00054872	-2.965	-0.001253	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.73621	1	4598	4598		25.126	1.7481	1	771770	+		42163	15587	28156	28169	47867	47867					0.13976431996798055
PNRAIRITK	9	Unmodified	_PNRAIRITK_					0	0	0		ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.8351440429688	2	534.835457	1067.65636	0.71163	0.0003806	-0.31265	-0.00016722	0.39897	0.00021339	534.8350832945772	18.902	0.56899	18.425	18.124	18.693	-0.47694					27	12	3	0	0	0	0.7932	1	450	450		26.693	1.1189	1	171940			42164	1934	28157	28170	47868	47868					0.12523935591002555
PNRAIRITKNQ	11	Unmodified	_PNRAIRITKNQ_					0	0	0		ENSG00000101347|ENST00000646673|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	ENSG00000101347|ENST00000646673|SAMHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.59375	3	437.593232	1309.75787	0.57035	0.00024958	0.62802	0.00027482	1.1984	0.0005244	437.59337174172776	17.144	0.52434	17.12	16.872	17.396	-0.024035					55	24	3	0	0	0	0.77511	1	231	231		16.53	0	1	367140			42165	1934	28158	28171	47869	47869					0.11537762222928905
PNREKGIGG	9	Unmodified	_PNREKGIGG_					0	0	0			REV__ENST00000562272.5_1_16:23691188-23701381:+|nuORF	REV__ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2530517578125	2	464.253966	926.493378	-1.0637	-0.00049381	0.90249	0.00041899	-0.16118	-7.4827E-05	464.25425647374504	80.528	1.4241	80.665	79.54	80.965	0.13702					81	45	3	0	0	0	0.76255	1	7659	7659		35.618	1.4457	1	413450	+		42166	28794	28159	28172	47870	47870					0.02719132469201213
PNREKGIGG	9	Unmodified	_PNREKGIGG_					0	0	0			REV__ENST00000562272.5_1_16:23691188-23701381:+|nuORF	REV__ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	464.253966	926.493378	-1.0637	-0.00049381	0.90249	0.00041899	-0.16118	-7.4827E-05	464.25425647374504	80.528	1.4241	80.665	79.54	80.965	0.13702	-0.03533	-0.00020056	NaN	35.618	81	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	413450	+		42167	28794	28159	28172							0.02719132469201213
PNREKGIGG	9	Unmodified	_PNREKGIGG_					0	0	0			REV__ENST00000562272.5_1_16:23691188-23701381:+|nuORF	REV__ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	464.253966	926.493378	-0.23476	-0.00010899	0.58537	0.00027176	0.35061	0.00016277	464.2540769162187	80.287	0.55048	80.814	80.485	81.035	0.52676	0.11386	-0.00049501	NaN	35.618	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111410	+		42168	28794	28159	28172							0.02719132469201213
PNRKASLPQD	10	Unmodified	_PNRKASLPQD_					0	0	0			REV__ENSG00000140961|ENST00000393306|OSGIN1	REV__ENSG00000140961|ENST00000393306|OSGIN1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	563.3035888671875	2	563.304187	1124.59382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.641	1	53.579	53.079	54.079	-0.062065								0	0	0	0.45132	1	4398	4398		23.523	0.48021	1		+		42169	19652	28160	28173	47871	47871					0.036507447321810105
PNRKLIEKVSQ	11	Unmodified	_PNRKLIEKVSQ_					0	0	0			REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.3844299316406	3	437.929621	1310.76703	0.57164	0.00025034	0.87978	0.00038528	1.4514	0.00063562	438.2636352377576	16.859	0.10089	16.835	16.792	16.893	-0.024035					5	4	2	0	0	0	0.17925	1	187	187		7.3413	0.32265	1	17841	+		42170	19131	28161	28174	47872	47872					0.12408110788601334
PNRKLIEKVSQ	11	Unmodified	_PNRKLIEKVSQ_					0	0	0			REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	437.929621	1310.76703	0.017261	7.5592E-06	1.1087	0.00048552	1.1259	0.00049308	438.2642536882349	16.409	0.068687	16.469	16.417	16.486	0.059267	-0.18311	0.0001162	NaN	7.3413	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22815	+		42171	19131	28161	28174							0.12408110788601334
PNRMRSSKK	9	Unmodified	_PNRMRSSKK_					0	0	0			REV__nc|ENSG00000182901|P49802-4|RGS7	REV__nc|ENSG00000182901|P49802-4|RGS7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3062744140625	2	552.308749	1102.60295	-1.4446	-0.00079788	-2.6511	-0.0014642	-4.0957	-0.0022621	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.76255	1	9445	9445		35.618	1.4457	1	1677300	+		42172	15443	28162	28175	47873	47873					0.05574814816873186
PNRNKKTRQ	9	Unmodified	_PNRNKKTRQ_					0	0	0			REV__ENSG00000112210|ENST00000468148|RAB23	REV__ENSG00000112210|ENST00000468148|RAB23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.3313598632812	2	571.33107	1140.64759	2.9117	0.0016635	-3.1322	-0.0017895	-0.22055	-0.00012601	571.3292778918316	102.35	2.3075	102.31	101.49	103.8	-0.047005					131	55	4	0	0	0	0.78983	1	11213	11213		27.882	2.4321	1	2404800	+		42173	17926	28163	28176	47874	47874					0.0828896195453126
PNRPPLLLT	9	Unmodified	_PNRPPLLLT_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8124084472656	2	510.813659	1019.61277	-0.74779	-0.00038198	-0.18473	-9.436E-05	-0.93251	-0.00047634	510.8133905049578	88.995	0.76931	89.465	89.034	89.803	0.47068					40	18	3	0	0	0	0.7932	1	10550	10550		23.042	2.0956	1	907200	+		42174	20542	28164	28177	47875	47875					0.10374326093892705
PNSKSCLAATP	11	Unmodified	_PNSKSCLAATP_					0	0	0			REV__ENSG00000143971|ENST00000272342|ETAA1	REV__ENSG00000143971|ENST00000272342|ETAA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.794677734375	2	544.773874	1087.53319	-0.24238	-0.00013204	-1.9262	-0.0010493	-2.1686	-0.0011814	544.7718566105433	66.442	0.68736	66.828	66.474	67.162	0.38582					37	18	3	0	0	0	0.17457	1	7205	7205		35.152	6.0025	1	426460	+		42175	19861	28165	28178	47876	47876					-0.007071086424275563
PNSLHVKTKGL	11	Unmodified	_PNSLHVKTKGL_					0	0	0		ENST00000265245.9_1_3:194362482-194362794:-|nuORF	ENST00000265245.9_1_3:194362482-194362794:-|nuORF	ENST00000265245.9_1_3:194362482-194362794:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8560791015625	2	597.35368	1192.69281	2.4166	0.0014436	0.49195	0.00029387	2.9086	0.0017374	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.67778	4	10006	9914;10006;10054;10187		35.152	6.0025	1	8047600			42176	9499	28166	28179	47877;47878;47879;47880	47878					0.10416767697097384
PNSLHVKTKGL	11	Unmodified	_PNSLHVKTKGL_					0	0	0		ENST00000265245.9_1_3:194362482-194362794:-|nuORF	ENST00000265245.9_1_3:194362482-194362794:-|nuORF	ENST00000265245.9_1_3:194362482-194362794:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8560180664062	2	597.35368	1192.69281	0.9357	0.00055895	2.5932	0.001549	3.5289	0.002108	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.55601	4	9532	9532;9544;9672;9758		47.96	10.148	1	19058000			42177	9499	28166	28179	47881;47882;47883;47884	47881					0.10416767697097384
PNSLHVKTKGL	11	Unmodified	_PNSLHVKTKGL_					0	0	0		ENST00000265245.9_1_3:194362482-194362794:-|nuORF	ENST00000265245.9_1_3:194362482-194362794:-|nuORF	ENST00000265245.9_1_3:194362482-194362794:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8560180664062	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.67778	2	9680	9680;9716		35.152	3.6222	1	18777000			42178	9499	28166	28179	47885;47886	47885					0.10416767697097384
PNSLKAHL	8	Unmodified	_PNSLKAHL_					0	0	0		ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.254638671875	2	440.255977	878.497401	-1.4879	-0.00065508	-0.26291	-0.00011575	-1.7509	-0.00077082	440.2558124081508	66.549	0.68278	66.682	66.36	67.042	0.13326					60	29	3	0	0	0	0.87064	1	5911	5911		29.15	3.6994	1	243800			42179	2644	28167	28180	47887	47887					0.053292219628815474
PNSLKAHL	8	Unmodified	_PNSLKAHL_					0	0	0		ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2550964355469	2	440.255977	878.497401	-1.4867	-0.00065454	0.10608	4.6703E-05	-1.3806	-0.00060783	440.2558792148897	67.228	0.84634	67.361	67.023	67.869	0.13326					70	34	3	0	0	0	0.8347	1	6002	6002		23.042	2.0956	1	457950			42180	2644	28167	28180	47888	47888					0.053292219628815474
PNSLKAHL	8	Unmodified	_PNSLKAHL_					0	0	0		ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2555847167969	2	440.255977	878.497401	0.37519	0.00016518	-1.741	-0.00076649	-1.3658	-0.00060131	440.2550792506915	60.127	0.96645	60.243	59.965	60.931	0.11676					48	34	2	0	0	0	0.89494	1	5229	5229		37.159	2.9866	1	370110			42181	2644	28167	28180	47889	47889					0.053292219628815474
PNSLKAHL	8	Unmodified	_PNSLKAHL_					0	0	0		ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.25390625	2	440.255977	878.497401	0.48837	0.00021501	-1.5877	-0.000699	-1.0993	-0.00048399	440.2553200536456	72.771	0.86505	72.902	72.395	73.26	0.13064					39	28	2	0	0	0	0.80706	1	6695	6695		19.36	1.995	1	97421			42182	2644	28167	28180	47890	47890					0.053292219628815474
PNSLKAHL	8	Unmodified	_PNSLKAHL_					0	0	0		ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	ENSG00000112238|ENST00000369215|PRDM13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2555847167969	2	440.255977	878.497401	-0.82974	-0.0003653	-0.76393	-0.00033632	-1.5937	-0.00070162	440.2556367977485	60.313	1.0519	60.313	60.031	61.083	0.00051117					60	36	3	0	0	0	0.87064	1	5287	5287		29.15	0	1	290170			42183	2644	28167	28180	47891	47891					0.053292219628815474
PNSLKRFL	8	Unmodified	_PNSLKRFL_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7908630371094	2	487.792727	973.5709	-1.0855	-0.00052952	-3.4554	-0.0016855	-4.541	-0.0022151	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.87064	1	7650	7650		29.15	1.2673	1	309700	+		42184	16905	28168	28181	47892	47892					0.08305770405377189
PNSLKRFL	8	Unmodified	_PNSLKRFL_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7907409667969	2	487.792727	973.5709	-1.0481	-0.00051127	-3.1066	-0.0015154	-4.1547	-0.0020267	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.84341	1	8063	8063		24.203	2.2429	1	1176800	+		42185	16905	28168	28181	47893	47893					0.08305770405377189
PNSLKRFL	8	Unmodified	_PNSLKRFL_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7906494140625	2	487.792727	973.5709	-1.4694	-0.00071678	-3.0475	-0.0014866	-4.5169	-0.0022033	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.87922	1	8174	8174		31.955	2.8053	1	607090	+		42186	16905	28168	28181	47894	47894					0.08305770405377189
PNSLVKKYK	9	Unmodified	_PNSLVKKYK_					0	0	0			REV__nc|ENSG00000153815|Q8IY22-3|CMIP	REV__nc|ENSG00000153815|Q8IY22-3|CMIP	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8281860351562	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.93	1	116.91	116.41	117.41	-0.02433								0	0	0	0.28386	1	12952	12952		37.159	16.212	1		+		42187	20358	28169	28182	47895	47895					0.1041859526535518
PNSLVKKYK	9	Unmodified	_PNSLVKKYK_					0	0	0			REV__nc|ENSG00000153815|Q8IY22-3|CMIP	REV__nc|ENSG00000153815|Q8IY22-3|CMIP	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8282470703125	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.44	1	114.45	113.95	114.95	0.0094528								0	0	0	0.32758	1	13810	13810		20.947	1.8434	1		+		42188	20358	28169	28182	47896	47896					0.1041859526535518
PNSLVKLPPPR	11	Unmodified	_PNSLVKLPPPR_					0	0	0		ENST00000594708.1_1_9:72873172-72873439:-|nuORF	ENST00000594708.1_1_9:72873172-72873439:-|nuORF	ENST00000594708.1_1_9:72873172-72873439:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.57989501953125	3	406.583674	1216.72919	2.7172	0.0011048	-1.5977	-0.0006496	1.1195	0.00045519	406.5829974892177	112.19	0.62576	112.17	112.07	112.69	-0.025414					23	13	2	0	0	0	0.76087	1	12392	12392		19.627	1.0959	1	1536200			42189	14319	28170	28183	47897	47897					0.1294964459377752
PNSSVPSPGLA	11	Unmodified	_PNSSVPSPGLA_					0	0	0		nc|ENSG00000122779|O15164-2|TRIM24;ENSG00000122779|ENST00000343526|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.26904296875	2	513.266739	1024.51892	0.59242	0.00030407	2.9712	0.001525	3.5636	0.0018291	513.2681183580644	76.017	0.8701	76.15	75.72	76.59	0.13325					39	25	2	0	0	0	0.72106	1	7118	7118		28.081	6.1216	1	124400			42190	3246	28171	28184	47898	47898					0.0076456220097043115
PNSTVIASSSV	11	Unmodified	_PNSTVIASSSV_					0	0	0			REV__nc|ENSG00000186260|Q9ULH7-4|MRTFB	REV__nc|ENSG00000186260|Q9ULH7-4|MRTFB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7588500976562	2	531.277303	1060.54005	0.085763	4.5564E-05	2.5938	0.001378	2.6796	0.0014236	531.2788014649534	83.248	0.5414	83.704	83.438	83.979	0.45556					15	12	2	0	0	0	0.17387	1	9654	9654		23.523	3.5259	1	91420	+		42191	22839	28172	28185	47899	47899					0.012205275098040147
PNTGALRFI	9	Unmodified	_PNTGALRFI_					0	0	0		L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|154|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|154|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|154|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7799072265625	2	494.782359	987.550165	-1.0197	-0.00050453	-3.2191	-0.0015927	-4.2388	-0.0020973	494.78063343938777	84.197	2.1372	84.197	83.134	85.271	0					93	51	2	0	0	0	0.58668	1	7933	7933		47.657	0	1	184680			42192	14678	28173	28186	47900	47900					0.05589180025708629
PNTGALRFI	9	Unmodified	_PNTGALRFI_					0	0	0		L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|154|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|154|3|sense	L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|154|3|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	494.782359	987.550165	-0.89815	-0.00044439	-3.0971	-0.0015324	-3.9953	-0.0019768	494.78059948303314	83.618	1.525	84.053	83.257	84.782	0.43538	0.022782	0.00068357	NaN	47.657	57	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	203720			42193	14678	28173	28186							0.05589180025708629
PNTLKDGDR	9	Unmodified	_PNTLKDGDR_					0	0	0		nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2619934082031	2	508.261988	1014.50942	-0.085615	-4.3515E-05	-0.35531	-0.00018059	-0.44092	-0.0002241	508.2615134681976	29.34	0.45193	29.297	29.081	29.533	-0.043095					29	17	2	0	0	0	0.68711	1	1531	1531		41.427	4.9799	1	46165			42194	5274	28174	28187	47901	47901					0.0027479391542328813
PNTLPPVL	8	Unmodified	_PNTLPPVL_					0	0	0			REV__ENSG00000205497|ENST00000641898|OR51A4	REV__ENSG00000205497|ENST00000641898|OR51A4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.2448425292969	2	425.755278	849.496004	-1.7097	-0.00072793	-4.1217	-0.0017548	-5.8314	-0.0024828	425.7534082031683	88.26	0.89276	88.464	88.104	88.996	0.20367					33	21	2	0	0	0	0.4196	1	8720	8720		12.207	0	1	122240	+		42195	23562	28175	28188	47902	47902					0.06523587874130499
PNTQMSRLGSA	11	Unmodified	_PNTQMSRLGSA_					0	0	0		ENST00000587515.5_1_19:38743641-38743875:-|nuORF	ENST00000587515.5_1_19:38743641-38743875:-|nuORF	ENST00000587515.5_1_19:38743641-38743875:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.2909545898438	2	581.287679	1160.56081	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.121	1	19.492	18.992	19.992	-0.6296								0	0	0	0.56276	1	610	610		29.17	4.9382	1				42196	14194	28176	28189	47903	47903					-0.013052053821638765
PNTVIILI	8	Unmodified	_PNTVIILI_					0	0	0		ENSG00000119396|ENST00000373840|RAB14	ENSG00000119396|ENST00000373840|RAB14	ENSG00000119396|ENST00000373840|RAB14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7879333496094	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.82419	1	3304	3304		13.775	0.81615	1	4170800			42197	3065	28177	28190	47904	47904					0.11308733942348681
PNTVQLRKW	9	Unmodified	_PNTVQLRKW_					0	0	0			REV__ENST00000484374.1_1_9:17135063-17166975:+|nuORF	REV__ENST00000484374.1_1_9:17135063-17166975:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.3311157226562	2	571.327465	1140.64038	2.9117	0.0016635	3.1782	0.0018158	6.0899	0.0034793	571.3292778918316	102.35	2.3075	102.31	101.49	103.8	-0.047005					131	55	4	0	0	0	0.76255	1	11141	11141		35.618	2.8059	1	2404800	+		42198	16342	28178	28191	47905	47905					0.07568229354137657
PNVGLISI	8	Unmodified	_PNVGLISI_					0	0	0		ENST00000492729.1_1_1:153941001-153941837:+|nuORF;ENST00000461688.5_1_1:153940632-153942210:+|nuORF;nc|ENSG00000143578|Q8TEY5-2|CREB3L4;ENSG00000143578|ENST00000368607|CREB3L4	ENST00000492729.1_1_1:153941001-153941837:+|nuORF	ENST00000492729.1_1_1:153941001-153941837:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.25640869140625	2	406.747453	811.480354	1.0218	0.00041563	1.4054	0.00057165	2.4273	0.00098729	406.74803298144195	39.913	1.6749	39.922	39.1	40.774	0.0092773					61	40	2	0	0	0	0.4196	1	2846	2846		37.159	18.835	1	125580			42199	4648	28179	28192	47906	47906					0.06707301357084816
PNVGTKRK	8	Unmodified	_PNVGTKRK_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27392578125	2	450.274701	898.534849	-0.14199	-6.3935E-05	0.32223	0.00014509	0.18024	8.1158E-05	450.2746568887371	83.435	0.68503	83.502	83.125	83.81	0.066727					32	15	3	0	0	0	0.84341	1	8298	8298		24.203	2.2429	1	229020	+		42200	21676	28180	28193	47907	47907					0.08152313228515595
PNVGWAYPYY	10	Unmodified	_PNVGWAYPYY_					0	0	0			REV__ENSG00000166959|ENST00000300226|MS4A8	REV__ENSG00000166959|ENST00000300226|MS4A8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	410.5256652832031	3	410.525713	1228.55531	1.8104	0.00074321	-1.8391	-0.00075501	-0.028754	-1.1804E-05	410.52482898990854	56.428	1.4903	56.462	56.211	57.702	0.033184					119	59	3	0	0	0	0.86201	2	5102	5087;5102		16.717	5.6206	1	2664700	+		42201	21344	28181	28194	47908;47909	47909					-0.049825609023173456
PNVIRLLGV	9	Unmodified	_PNVIRLLGV_					0	0	0		ENSG00000153208|ENST00000295408|MERTK	ENSG00000153208|ENST00000295408|MERTK	ENSG00000153208|ENST00000295408|MERTK	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.8490295410156	2	490.816202	979.617851	0.56255	0.00027611	-1.5938	-0.00078225	-1.0312	-0.00050614	490.8151861929092	75.138	0.50609	75.27	75.002	75.508	0.13208					17	13	2	0	0	0	0.20789	1	6943	6943		31.955	6.3808	1	64563			42202	5222	28182	28195	47910	47910					0.127226299565109
PNVIRLLGV	9	Unmodified	_PNVIRLLGV_					0	0	0		ENSG00000153208|ENST00000295408|MERTK	ENSG00000153208|ENST00000295408|MERTK	ENSG00000153208|ENST00000295408|MERTK	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	490.816202	979.617851	-0.63235	-0.00031037	-0.90406	-0.00044373	-1.5364	-0.00075409	490.815709239883	74.935	0.70059	75.326	74.912	75.612	0.3911	0.020012	7.8404E-05	NaN	31.955	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	274920			42203	5222	28182	28195							0.127226299565109
PNVIRLLGV	9	Unmodified	_PNVIRLLGV_					0	0	0		ENSG00000153208|ENST00000295408|MERTK	ENSG00000153208|ENST00000295408|MERTK	ENSG00000153208|ENST00000295408|MERTK	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	490.816202	979.617851	-0.16743	-8.2176E-05	-1.1378	-0.00055846	-1.3053	-0.00064064	490.81556728371817	74.754	0.81538	75.319	74.927	75.742	0.56458	0.012485	-0.00015107	NaN	31.955	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	238230			42204	5222	28182	28195							0.127226299565109
PNVLLMLSA	9	Unmodified	_PNVLLMLSA_					0	0	0		nc|ENSG00000102606|Q14155-5|ARHGEF7;nc|ENSG00000102606|Q14155-2|ARHGEF7;nc|ENSG00000102606|Q14155-3|ARHGEF7;nc|ENSG00000102606|Q14155|ARHGEF7;ENSG00000102606|ENST00000646102|ARHGEF7;nc|ENSG00000102606|Q14155-6|ARHGEF7;nc|ENSG00000102606|Q14155-1|ARHGEF7	nc|ENSG00000102606|Q14155-5|ARHGEF7	nc|ENSG00000102606|Q14155-5|ARHGEF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2774963378906	2	479.275521	956.536489	0.61468	0.0002946	3.1717	0.0015201	3.7864	0.0018147	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.74721	1	7883	7883		37.159	6.6555	1	1802300			42205	2012	28183	28196	47911	47911					0.05648186202245142
PNVQKLKW	8	Unmodified	_PNVQKLKW_					0	0	0		nc|ENSG00000113328|P51959-2|CCNG1;chr5:163439346-163441211|58|18.0|0.62|4.87|+|ENST00000510664|CCNG1,CCNG1;ENSG00000113328|ENST00000340828|CCNG1	nc|ENSG00000113328|P51959-2|CCNG1	nc|ENSG00000113328|P51959-2|CCNG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	507.30126953125	2	506.800552	1011.58655	-0.4991	-0.00025294	1.3209	0.00066945	0.82183	0.00041651	506.8011482581911	44.494	2.6105	44.503	42.78	45.391	0.0084534					109	64	3	0	0	0	0.81548	1	3159	3159		20.482	2.1574	1	373670			42206	446	28184	28197	47912	47912					0.08122056922422871
PNVVHKVVGCL	11	Unmodified	_PNVVHKVVGCL_					0	0	0			REV__nc|ENSG00000144893|Q86YW9-4|MED12L	REV__nc|ENSG00000144893|Q86YW9-4|MED12L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8317260742188	2	582.831526	1163.6485	-0.83199	-0.00048491	2.73	0.0015911	1.898	0.0011062	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.61774	1	9834	9834		42.396	8.2236	1	796430	+		42207	15801	28185	28198	47913	47913					0.07322040279268549
PNVYIQKIFAS	11	Unmodified	_PNVYIQKIFAS_					0	0	0		ENSG00000205883|ENST00000382208|DEFB135	ENSG00000205883|ENST00000382208|DEFB135	ENSG00000205883|ENST00000382208|DEFB135	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3587646484375	2	640.355888	1278.69722	1.6035	0.0010268	3.0485	0.0019521	4.652	0.0029789	640.3577368030512	99.407	2.6879	99.454	98.409	101.1	0.047531					162	62	4	0	0	0	0.69995	1	10614	10614		31.53	0.96095	1	584870			42208	8546	28186	28199	47914	47914					0.0690223211997818
PNYRVINI	8	Unmodified	_PNYRVINI_					0	0	0		ENSG00000085377|ENST00000652536|PREP	ENSG00000085377|ENST00000652536|PREP	ENSG00000085377|ENST00000652536|PREP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.77996826171875	2	494.782359	987.550165	-1.5759	-0.00077971	-2.3488	-0.0011622	-3.9247	-0.0019419	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.884	1	8281	8281		33.516	0	1	569520			42209	1529	28187	28200	47915	47915					0.05589180025708629
PNYVKMVPIDC	11	Unmodified	_PNYVKMVPIDC_					0	0	0			REV__ENSG00000165572|ENST00000379485|KBTBD6	REV__ENSG00000165572|ENST00000379485|KBTBD6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.3028259277344	3	426.878882	1277.61482	0.43102	0.00018399	0.97408	0.00041581	1.4051	0.00059981	427.2130025850703	67.155	0.089241	67.283	67.232	67.322	0.12748					5	3	2	0	0	0	0.17432	1	5988	5988		26.75	25.752	1	53045	+		42210	21196	28188	28201	47916	47916					-0.012887492747950091
PPAAEELL	8	Unmodified	_PPAAEELL_					0	0	0			REV__nc|ENSG00000084112|Q8WYL5-4|SSH1	REV__nc|ENSG00000084112|Q8WYL5-4|SSH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.226318359375	2	420.229094	838.443634	-0.18786	-7.8944E-05	-2.8091	-0.0011805	-2.997	-0.0012594	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.86288	1	7293	7293		26.796	1.3459	1	279000	+		42211	16870	28189	28202	47917	47917					0.01795004740540662
PPAAPHAASI	10	Unmodified	_PPAAPHAASI_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2546081542969	2	466.253434	930.492316	0.58367	0.00027214	-0.25584	-0.00011929	0.32783	0.00015285	466.25309008937415	25.242	0.58601	25.292	25.002	25.588	0.050451					40	22	2	0	0	0	0.86305	1	993	993		31.955	5.2619	1	74834	+		42212	28273	28190	28203	47918	47918					0.024289181002814075
PPAARARA	8	Unmodified	_PPAARARA_					0	0	0		ENST00000495146.5_1_2:26257410-26257569:+|nuORF	REV__ENST00000595775.5_1_19:42817488-42818494:+|nuORF;REV__nc|ENSG00000162981|Q96KN4-2|LRATD1	REV__ENST00000595775.5_1_19:42817488-42818494:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.21759033203125	2	405.240661	808.46677	2.8967	0.0011739	-2.9425	-0.0011924	-0.04587	-1.8588E-05	405.2393789149573	85.246	0.73985	85.304	85.108	85.848	0.057899					30	16	2	0	0	0	0.4196	1	8709	8709		4.3163	0	1	280650			42213	29251;29979	28191	28204	47919	47919					0.05487488368510185
PPAARLQPQR	10	Unmodified	_PPAARLQPQR_					0	0	0			REV__nc|ENSG00000255568|P59051|BRWD1-AS2	REV__nc|ENSG00000255568|P59051|BRWD1-AS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3309936523438	2	567.330539	1132.64652	0.4851	0.00027521	-1.8618	-0.0010563	-1.3767	-0.00078107	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.88541	1	9173	9173		11.511	0.64546	1	18558000	+		42214	29343	28192	28205	47920	47920					0.08550747585650242
PPAAVPSLS	9	Unmodified	_PPAAVPSLS_					0	0	0			REV__ENSG00000259956|ENST00000563281|RBM15B	REV__ENSG00000259956|ENST00000563281|RBM15B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.1842041015625	2	419.737086	837.459619	0.61067	0.00025632	-4.4511	-0.0018683	-3.8404	-0.001612	419.7355781801118	87.108	0.81244	87.257	86.827	87.639	0.14956					31	18	2	0	0	0	0.20789	1	8633	8633		18.324	10.093	1	89439	+		42215	23935	28193	28206	47921	47921					0.03438710977422943
PPAEVLSL	8	Unmodified	_PPAEVLSL_					0	0	0		ENST00000593854.5_1_19:7709481-7711320:+|nuORF	ENST00000593854.5_1_19:7709481-7711320:+|nuORF	ENST00000593854.5_1_19:7709481-7711320:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.23773193359375	2	413.239461	824.46437	-1.33	-0.0005496	-1.1028	-0.00045573	-2.4328	-0.0010053	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.884	1	7016	7016		33.516	0	1	895630			42216	14311	28194	28207	47922	47922					0.04511595120197853
PPAEVLSL	8	Unmodified	_PPAEVLSL_					0	0	0		ENST00000593854.5_1_19:7709481-7711320:+|nuORF	ENST00000593854.5_1_19:7709481-7711320:+|nuORF	ENST00000593854.5_1_19:7709481-7711320:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.238037109375	2	413.239461	824.46437	-0.18778	-7.7597E-05	-2.7175	-0.001123	-2.9053	-0.0012006	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.884	1	7388	7388		33.516	6.7195	1	1747900			42217	14311	28194	28207	47923	47923					0.04511595120197853
PPAGGRLPLP	10	Unmodified	_PPAGGRLPLP_					0	0	0		ENST00000381168.7_1_11:2187868-2190906:-|nuORF	ENST00000381168.7_1_11:2187868-2190906:-|nuORF	ENST00000381168.7_1_11:2187868-2190906:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.79052734375	2	487.792727	973.5709	-1.0481	-0.00051127	-3.1066	-0.0015154	-4.1547	-0.0020267	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.6398	1	7903	7903		47.916	4.2896	1	1176800			42218	10945	28195	28208	47924	47924					0.08305770405377189
PPAGLGLLL	9	Unmodified	_PPAGLGLLL_					0	0	0		ENST00000469086.5_1_22:39136824-39138467:-|nuORF;ENST00000477262.5_1_22:39135390-39138407:-|nuORF	ENST00000469086.5_1_22:39136824-39138467:-|nuORF	ENST00000469086.5_1_22:39136824-39138467:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	425.7748107910156	2	425.773471	849.53239	0.42545	0.00018115	3.0537	0.0013002	3.4791	0.0014813	425.7747050516017	38.994	1.8218	39.005	38.08	39.902	0.011173					147	42	5	0	0	0	0.7932	1	2771	2771		14.664	0	1	15234000			42219	12189	28196	28209	47925	47925					0.10160464770854105
PPAGRKFP	8	Unmodified	_PPAGRKFP_					0	0	0		ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25140380859375	2	435.253237	868.491922	-1.5606	-0.00067925	-2.838	-0.0012352	-4.3985	-0.0019145	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.86791	1	7763	7763		28.254	4.0515	1	3322700			42220	9677	28197	28210	47926	47926					0.0524154317108696
PPAGRKFP	8	Unmodified	_PPAGRKFP_					0	0	0		ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2515563964844	2	435.253237	868.491922	-1.5314	-0.00066653	-2.8716	-0.0012499	-4.4029	-0.0019164	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.86288	2	7488	7488;7505		28.254	2.8041	1	2494100			42221	9677	28197	28210	47927;47928	47927					0.0524154317108696
PPAGRKFP	8	Unmodified	_PPAGRKFP_					0	0	0		ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25244140625	2	435.253237	868.491922	-0.32142	-0.0001399	-4.1582	-0.0018099	-4.4796	-0.0019498	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.87276	1	9364	9364		29.842	1.5873	1	2020200			42222	9677	28197	28210	47929	47929					0.0524154317108696
PPAHITLRPPL	11	Unmodified	_PPAHITLRPPL_					0	0	0			REV__ENSG00000047410|ENST00000367478|TPR	REV__ENSG00000047410|ENST00000367478|TPR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	606.3695678710938	2	606.36659	1210.71863	0.84903	0.00051483	3.9676	0.0024058	4.8166	0.0029206	606.3688643769136	94.076	3.4223	94.237	93.324	96.746	0.16118					202	81	3	0	0	0	0.70737	1	9556	9556		30.318	1.1682	1	934800	+		42223	16352	28198	28211	47930	47930					0.12169661939356047
PPAIQRYI	8	Unmodified	_PPAIQRYI_					0	0	0		ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	ENSG00000146809|ENST00000451215|ASB15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2774353027344	2	479.279452	956.544351	0.29447	0.00014113	-4.2782	-0.0020505	-3.9838	-0.0019093	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.88915	1	9932	9932		35.201	1.6851	1	5642300			42224	4859	28199	28212	47931	47931					0.0643408151404401
PPALHTSLSPQ	11	Unmodified	_PPALHTSLSPQ_					0	0	0		ENST00000375980.8_1_1:15755555-15755726:+|nuORF	ENST00000375980.8_1_1:15755555-15755726:+|nuORF	ENST00000375980.8_1_1:15755555-15755726:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3018798828125	2	574.308938	1146.60332	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.829	1	72.788	72.288	73.288	-0.04039								0	0	0	0.56276	1	7128	7128		29.17	2.1227	1				42225	10811	28200	28213	47932	47932					0.03588513017712103
PPALLRHLFN	10	Unmodified	_PPALLRHLFN_					0	0	0		ENSG00000167207|ENST00000647318|NOD2;nc|ENSG00000167207|Q9HC29|NOD2	ENSG00000167207|ENST00000647318|NOD2	ENSG00000167207|ENST00000647318|NOD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3432006835938	2	589.345658	1176.67676	-0.40075	-0.00023618	-4.2062	-0.0024789	-4.607	-0.0027151	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.86589	1	9182	9182		29.15	2.4566	1	4112500			42226	6277	28201	28214	47933	47933					0.09549106250847217
PPALLRHLFN	10	Unmodified	_PPALLRHLFN_					0	0	0		ENSG00000167207|ENST00000647318|NOD2;nc|ENSG00000167207|Q9HC29|NOD2	ENSG00000167207|ENST00000647318|NOD2	ENSG00000167207|ENST00000647318|NOD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.343017578125	2	589.345658	1176.67676	-0.6745	-0.00039751	-4.0641	-0.0023951	-4.7386	-0.0027927	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.86589	1	10110	10110		29.15	1.0681	1	16185000			42227	6277	28201	28214	47934	47934					0.09549106250847217
PPALLYIN	8	Unmodified	_PPALLYIN_					0	0	0			REV__ENSG00000167360|ENST00000300778|OR51Q1	REV__ENSG00000167360|ENST00000300778|OR51Q1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2744140625	2	450.763104	899.511654	1.6936	0.00076341	-2.5203	-0.0011361	-0.82675	-0.00037267	450.761420042513	93.088	0.36679	93.026	92.72	93.087	-0.061432					13	8	3	0	0	0	0.4196	1	9832	9832		13.775	0	1	128970	+		42228	21381	28202	28215	47935	47935					0.05787874391182868
PPALPALWT	9	Unmodified	_PPALPALWT_					0	0	0		ENSG00000268041|ENST00000597630|ERFL	ENSG00000268041|ENST00000597630|ERFL	ENSG00000268041|ENST00000597630|ERFL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.2782897949219	2	483.276378	964.538203	2.0431	0.00098738	2.9229	0.0014126	4.966	0.0023999	483.27782445100183	95.324	2.0754	95.266	94.681	96.756	-0.057526					132	48	4	0	0	0	0.7932	1	10268	10268		18.324	2.6826	1	1278800			42229	8960	28203	28216	47936	47936					0.05451563282497318
PPALPRPK	8	Unmodified	_PPALPRPK_					0	0	0			REV__ENST00000293230.9_1_17:74523460-74524138:-|nuORF	REV__ENST00000293230.9_1_17:74523460-74524138:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2633361816406	2	438.276712	874.538872	0.032691	1.4328E-05	2.1962	0.00096256	2.2289	0.00097688	438.27763825281016	36.032	0.2671	35.972	35.896	36.163	-0.060333					8	6	2	0	0	0	0.4196	1	1953	1953		13.775	0	1	43199	+		42230	24684	28204	28217	47937	47937					0.09658402722220671
PPALSGLACV	10	Unmodified	_PPALSGLACV_					0	0	0		ENST00000452075.7_1_10:43046018-43047669:-|nuORF	ENST00000452075.7_1_10:43046018-43047669:-|nuORF	ENST00000452075.7_1_10:43046018-43047669:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25390625	2	464.252046	926.489538	0.61869	0.00028723	3.7395	0.0017361	4.3582	0.0020233	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.86305	1	8352	8352		31.955	1.4512	1	1482000			42231	11913	28205	28218	47938	47938					0.02335326651109426
PPALSPTQPLL	11	Unmodified	_PPALSPTQPLL_					0	0	0			REV__ENST00000483923.5_1_10:100170623-100171145:-|nuORF	REV__ENST00000483923.5_1_10:100170623-100171145:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3304443359375	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.72106	1	10941	10941		28.081	1.0342	1	6007000	+		42232	27502	28206	28219	47939	47939					0.0881915819995811
PPALVHVH	8	Unmodified	_PPALVHVH_					0	0	0		chr19:57676541-57677914|22|13.59|0.61|4.47|+|0|ZSCAN4,ZSCAN4|1;ENSG00000180532|ENST00000318203|ZSCAN4	chr19:57676541-57677914|22|13.59|0.61|4.47|+|0|ZSCAN4,ZSCAN4|1	chr19:57676541-57677914|22|13.59|0.61|4.47|+|0|ZSCAN4,ZSCAN4|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25311279296875	2	435.253237	868.491922	-0.32142	-0.0001399	-4.1582	-0.0018099	-4.4796	-0.0019498	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.84567	1	8892	8892		24.504	0.30126	1	2020200			42233	296	28207	28220	47940	47940					0.0524154317108696
PPAPARIADSC	11	Unmodified	_PPAPARIADSC_					0	0	0		nc|ENSG00000065970|Q9P0K8-2|FOXJ2;ENSG00000065970|ENST00000162391|FOXJ2	nc|ENSG00000065970|Q9P0K8-2|FOXJ2	nc|ENSG00000065970|Q9P0K8-2|FOXJ2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.2716674804688	2	549.274041	1096.53353	-1.3279	-0.00072939	-3.0854	-0.0016947	-4.4133	-0.0024241	549.2722721223713	43.521	0.52309	43.521	43.221	43.744	0					23	12	2	0	0	0	0.32928	1	3086	3086		67.494	10.773	1	162310			42234	1146	28208	28221	47941	47941					-0.010876889225755804
PPAPFPRRVP	10	Unmodified	_PPAPFPRRVP_					0	0	0			REV__ENST00000297273.8_1_7:94139274-94139451:+|nuORF	REV__ENST00000297273.8_1_7:94139274-94139451:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.330078125	2	567.33255	1132.65055	-0.51077	-0.00028978	-4.2511	-0.0024118	-4.7619	-0.0027016	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.86452	1	9417	9417		30.504	1.3336	1	11042000	+		42235	24724	28209	28222	47942	47942					0.08952837079368692
PPAPFPRRVP	10	Unmodified	_PPAPFPRRVP_					0	0	0			REV__ENST00000297273.8_1_7:94139274-94139451:+|nuORF	REV__ENST00000297273.8_1_7:94139274-94139451:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297119140625	2	567.33255	1132.65055	-0.468	-0.00026551	-4.072	-0.0023102	-4.54	-0.0025757	567.330130226139	95.712	2.0668	95.712	95.357	97.424	0					107	47	3	0	0	0	0.86718	1	9509	9509		27.882	3.3631	1	608220	+		42236	24724	28209	28222	47943	47943					0.08952837079368692
PPAPHKAV	8	Unmodified	_PPAPHKAV_					0	0	0		ENST00000311268.7_1_12:6930714-6930912:+|nuORF	ENST00000311268.7_1_12:6930714-6930912:+|nuORF	ENST00000311268.7_1_12:6930714-6930912:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.7392578125	2	408.739963	815.465373	-1.0833	-0.00044277	0.59228	0.00024209	-0.49098	-0.00020068	408.74010288341543	37.409	2.2746	37.356	36.961	39.236	-0.053558					112	51	3	0	0	0	0.82464	1	2538	2538		21.702	1.2205	1	289290			42237	9925	28210	28223	47944	47944					0.0502585427974509
PPAPHKAV	8	Unmodified	_PPAPHKAV_					0	0	0		ENST00000311268.7_1_12:6930714-6930912:+|nuORF	ENST00000311268.7_1_12:6930714-6930912:+|nuORF	ENST00000311268.7_1_12:6930714-6930912:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.7394104003906	2	408.739963	815.465373	0.85094	0.00034781	-1.5858	-0.00064816	-0.73482	-0.00030035	408.7393373651895	37.561	2.1469	37.572	37.24	39.387	0.011173					113	49	4	0	0	0	0.84567	1	2534	2534		24.504	3.5571	1	272800			42238	9925	28210	28223	47945	47945					0.0502585427974509
PPAPHKAV	8	Unmodified	_PPAPHKAV_					0	0	0		ENST00000311268.7_1_12:6930714-6930912:+|nuORF	ENST00000311268.7_1_12:6930714-6930912:+|nuORF	ENST00000311268.7_1_12:6930714-6930912:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7386779785156	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.80127	1	2143	2143		16.705	0	1	1448600			42239	9925	28210	28223	47946	47946					0.0502585427974509
PPAPHKAV	8	Unmodified	_PPAPHKAV_					0	0	0		ENST00000311268.7_1_12:6930714-6930912:+|nuORF	ENST00000311268.7_1_12:6930714-6930912:+|nuORF	ENST00000311268.7_1_12:6930714-6930912:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7400207519531	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.86791	2	2005	2005;2118		31.579	12.219	1	1654100			42240	9925	28210	28223	47947;47948	47947					0.0502585427974509
PPAPRVGVA	9	Unmodified	_PPAPRVGVA_					0	0	0			REV__ENST00000367996.5_1_1:161160742-161160913:-|nuORF	REV__ENST00000367996.5_1_1:161160742-161160913:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.2581787109375	2	432.25852	862.502486	0.095672	4.1355E-05	-1.4893	-0.00064377	-1.3936	-0.00060241	432.25767954187023	68.33	1.4604	68.877	68.284	69.744	0.54722					66	34	3	0	0	0	0.7932	1	7517	7517		24.203	1.1603	1	472160	+		42241	25584	28211	28224	47949	47949					0.06573525825513116
PPAPSGPKAS	10	Unmodified	_PPAPSGPKAS_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	454.7445983886719	2	454.745442	907.476331	0.75875	0.00034504	-1.8682	-0.00084954	-1.1094	-0.0005045	454.7444452036616	103.95	1.168	104.06	103.62	104.79	0.11684					52	28	3	0	0	0	0.8651	1	11010	11010		25.574	0	1	321450			42242	7798	28212	28225	47950	47950					0.01889211863374385
PPAPSPAPPSA	11	Unmodified	_PPAPSPAPPSA_					0	0	0			REV__nc|ENSG00000128283|Q00587-2|CDC42EP1	REV__nc|ENSG00000128283|Q00587-2|CDC42EP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3006591796875	2	494.758549	987.502546	0.76606	0.00037901	2.4439	0.0012091	3.21	0.0015882	494.76082809940635	97.282	0.16291	97.445	97.341	97.504	0.16317					5	3	2	0	0	0	0.17431	1	10057	10057		39.253	15.05	1	36064	+		42243	18766	28213	28226	47951	47951					0.008294810348388637
PPAQRPRLKD	10	Unmodified	_PPAQRPRLKD_					0	0	0		ENST00000265062.7_1_3:128444969-128514218:+|nuORF	ENST00000265062.7_1_3:128444969-128514218:+|nuORF	ENST00000265062.7_1_3:128444969-128514218:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3431396484375	2	589.343646	1176.67274	-0.6745	-0.00039751	-0.65118	-0.00038377	-1.3257	-0.00078128	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.86218	1	10001	10001		32.812	3.6424	1	16185000			42244	9494	28214	28227	47952	47952					0.09147016757128767
PPAQVVRF	8	Unmodified	_PPAQVVRF_					0	0	0			REV__chr11:65553903-65557629|26|12.88|0.29|5.48|-|2|LTBP3,LTBP3|1	REV__chr11:65553903-65557629|26|12.88|0.29|5.48|-|2|LTBP3,LTBP3|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2630920410156	2	457.266345	912.518136	-1.1625	-0.00053158	-3.3651	-0.0015388	-4.5277	-0.0020703	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.884	1	8209	8209		33.516	3.0119	1	4732500	+		42245	15502	28215	28228	47953	47953					0.05837812342565485
PPARCGRQQQP	11	Unmodified	_PPARCGRQQQP_					0	0	0			REV__ENST00000467087.5_2_4:26862451-26862580:+|nuORF	REV__ENST00000467087.5_2_4:26862451-26862580:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.3199462890625	2	619.314563	1236.61457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.005	1	57.988	57.488	58.488	-0.01643								0	0	0	0.56276	1	4921	4921		32.812	2.4947	1		+		42246	27146	28216	28229	47954	47954					0.005730118401970685
PPARFPRPI	9	Unmodified	_PPARFPRPI_					0	0	0		ENSG00000275954|ENST00000620210|TBC1D3F;nc|ENSG00000275954|A6NER0|TBC1D3F;ENSG00000278599|ENST00000621587|TBC1D3E;ENSG00000278299|ENST00000622206|TBC1D3C;ENSG00000274933|ENST00000621034|TBC1D3I;ENSG00000274808|ENST00000611257|TBC1D3B;ENSG00000274611|ENST00000620215|TBC1D3;ENSG00000274512|ENST00000612727|TBC1D3L;ENSG00000274419|ENST00000616101|TBC1D3D;ENSG00000274226|ENST00000610350|TBC1D3H;ENSG00000273513|ENST00000620247|TBC1D3K;ENSG00000260287|ENST00000569055|TBC1D3G	ENSG00000275954|ENST00000620210|TBC1D3F	ENSG00000275954|ENST00000620210|TBC1D3F	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8076171875	2	525.813993	1049.61343	2.835	0.0014907	-0.1835	-9.6487E-05	2.6515	0.0013942	525.8133221787741	101.75	0.3077	102.07	101.98	102.29	0.3251					9	6	2	0	0	0	0.20789	1	12386	12386		33.516	8.0654	1	99140			42247	8917	28217	28230	47955	47955					0.09061165533603344
PPASLEVL	8	Unmodified	_PPASLEVL_					0	0	0		ENSG00000187266|ENST00000222139|EPOR;ENST00000592375.6_1_19:11488662-11489328:-|nuORF	ENSG00000187266|ENST00000222139|EPOR	ENSG00000187266|ENST00000222139|EPOR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2380676269531	2	413.239461	824.46437	-0.18778	-7.7597E-05	-2.7175	-0.001123	-2.9053	-0.0012006	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.86288	1	7522	7522		26.796	0	1	1747900			42248	7852	28218	28231	47956	47956					0.04511595120175116
PPASLEVL	8	Unmodified	_PPASLEVL_					0	0	0		ENSG00000187266|ENST00000222139|EPOR;ENST00000592375.6_1_19:11488662-11489328:-|nuORF	ENSG00000187266|ENST00000222139|EPOR	ENSG00000187266|ENST00000222139|EPOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2382507324219	2	413.239461	824.46437	0.89927	0.00037161	-3.9864	-0.0016473	-3.0871	-0.0012757	413.23775271826133	77.246	5.6199	77.651	75.794	81.414	0.40531					207	140	2	0	0	0	0.86791	1	8654	8654		28.254	0	1	1083000			42249	7852	28218	28231	47957	47957					0.04511595120175116
PPASLTLI	8	Unmodified	_PPASLTLI_					0	0	0			REV__nc|ENSG00000100150|O75140-6|DEPDC5	REV__nc|ENSG00000100150|O75140-6|DEPDC5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2485046386719	2	406.249829	810.485105	-1.171	-0.0004757	-1.7314	-0.00070337	-2.9023	-0.0011791	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.86288	1	8640	8640		26.796	1.3459	1	30016000	+		42250	17143	28219	28232	47958	47958					0.07228185499855044
PPASLTLI	8	Unmodified	_PPASLTLI_					0	0	0			REV__nc|ENSG00000100150|O75140-6|DEPDC5	REV__nc|ENSG00000100150|O75140-6|DEPDC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24847412109375	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.86288	1	8950	8950		26.796	1.3459	1	50007000	+		42251	17143	28219	28232	47959	47959					0.07228185499855044
PPASPLRPAL	10	Unmodified	_PPASPLRPAL_					0	0	0			REV__ENST00000373313.2_1_20:39317299-39317872:-|nuORF	REV__ENST00000373313.2_1_20:39317299-39317872:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8043518066406	2	509.805834	1017.59712	0.54005	0.00027532	-4.22	-0.0021514	-3.6799	-0.001876	509.80356957278343	84.302	2.3533	84.749	83.349	85.703	0.44736					134	57	3	0	0	0	0.64457	1	9854	9854		47.657	0	1	950450	+		42252	25757	28220	28233	47960	47960					0.08902039576844345
PPASRSWSTT	10	Unmodified	_PPASRSWSTT_					0	0	0		ENST00000506969.1_1_X:117903828-117904092:+|nuORF	ENST00000506969.1_1_X:117903828-117904092:+|nuORF	ENST00000506969.1_1_X:117903828-117904092:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.31689453125	2	545.269813	1088.52507	-0.66041	-0.0003601	2.1974	0.0011982	1.537	0.0008381	545.2708761944922	90.74	0.12791	90.74	90.649	90.777	0					4	2	2	0	0	0	0.37624	1	8832	8832		51.193	38.234	1	46782			42253	12949	28221	28234	47961	47961					-0.015649195675223382
PPASSPKRNTT	11	Unmodified	_PPASSPKRNTT_					0	0	0		ENSG00000146285|ENST00000369020|SCML4;nc|ENSG00000146285|Q8N228-3|SCML4;nc|ENSG00000146285|Q8N228-2|SCML4;ENST00000476798.1_1_6:108041877-108053271:-|nuORF	ENSG00000146285|ENST00000369020|SCML4	ENSG00000146285|ENST00000369020|SCML4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.808837890625	2	578.309469	1154.60439	-1.36	-0.00078649	3.1958	0.0018482	1.8358	0.0010617	578.3111160686906	110.18	1.4068	110.19	109.95	111.35	0.0060425					125	50	3	0	0	0	0.732	1	11725	11725		26.063	1.5442	1	2534300			42254	4835	28222	28235	47962	47962					0.033267273866158575
PPASTKAKFV	10	Unmodified	_PPASTKAKFV_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3052368164062	2	523.305667	1044.59678	-0.83281	-0.00043582	-3.2133	-0.0016815	-4.0461	-0.0021173	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.80179	1	8101	8101		39.253	17.293	1	2778600	+		42255	22085	28223	28236	47963	47963					0.07626619856978323
PPASTKAKFV	10	Unmodified	_PPASTKAKFV_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3033447265625	2	523.305667	1044.59678	-0.79828	-0.00041774	-3.1608	-0.0016541	-3.9591	-0.0020718	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.80179	1	8779	8779		39.253	13.803	1	9288900	+		42256	22085	28223	28236	47964	47964					0.07626619856978323
PPASTKAKFV	10	Unmodified	_PPASTKAKFV_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3032836914062	2	523.305667	1044.59678	-0.178	-9.3149E-05	-4.0857	-0.0021381	-4.2637	-0.0022312	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.80179	2	8573	8573;8609		39.253	1.2826	1	4158500	+		42257	22085	28223	28236	47965;47966	47965					0.07626619856978323
PPASTKAKFV	10	Unmodified	_PPASTKAKFV_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3032836914062	2	523.305667	1044.59678	-1.4863	-0.0007778	-2.6443	-0.0013838	-4.1306	-0.0021616	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.86763	1	8512	8512		26.693	0	1	3566700	+		42258	22085	28223	28236	47967	47967					0.07626619856978323
PPASTKAKFV	10	Unmodified	_PPASTKAKFV_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3032836914062	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.86348	2	8619	8619;8919		31.53	7.0106	1	12189000	+		42259	22085	28223	28236	47968;47969	47968					0.07626619856978323
PPASTKAKFV	10	Unmodified	_PPASTKAKFV_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3041381835938	2	523.305667	1044.59678	-1.5391	-0.00080541	-2.1942	-0.0011482	-3.7333	-0.0019536	523.3043931360254	91.382	2.3991	91.563	91.237	93.636	0.18029					145	56	4	0	0	0	0.64457	1	9126	9126		47.657	5.2612	1	1040100	+		42260	22085	28223	28236	47970	47970					0.07626619856978323
PPATALALV	9	Unmodified	_PPATALALV_					0	0	0		ENST00000572819.6_1_17:1939773-1940251:+|nuORF;ENST00000576129.5_1_17:1936818-1940251:+|nuORF;nc|ENSG00000108963|Q9BZG8-2|DPH1;ENSG00000108963|ENST00000263083|DPH1;nc|ENSG00000108963|Q9BZG8-1|DPH1	ENST00000572819.6_1_17:1939773-1940251:+|nuORF	ENST00000572819.6_1_17:1939773-1940251:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	427.3028564453125	2	426.763104	851.511654	1.5458	0.00065969	3.6536	0.0015592	5.1994	0.0022189	426.76386378483176	71.102	0.7856	71.14	70.616	71.401	0.038055					48	42	2	0	0	0	0.20789	1	6827	6827		35.201	22.994	1	113370			42261	2443	28224	28237	47971	47971					0.07995874391178859
PPATALALV	9	Unmodified	_PPATALALV_					0	0	0		ENST00000572819.6_1_17:1939773-1940251:+|nuORF;ENST00000576129.5_1_17:1936818-1940251:+|nuORF;nc|ENSG00000108963|Q9BZG8-2|DPH1;ENSG00000108963|ENST00000263083|DPH1;nc|ENSG00000108963|Q9BZG8-1|DPH1	ENST00000572819.6_1_17:1939773-1940251:+|nuORF	ENST00000572819.6_1_17:1939773-1940251:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	426.763104	851.511654	-0.844	-0.00036019	4.8186	0.0020564	3.9746	0.0016962	426.76492676626566	71.099	0.59377	71.06	70.813	71.407	-0.039009	-0.045301	0.00050172	NaN	35.201	36	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81554			42262	2443	28224	28237							0.07995874391178859
PPATALALV	9	Unmodified	_PPATALALV_					0	0	0		ENST00000572819.6_1_17:1939773-1940251:+|nuORF;ENST00000576129.5_1_17:1936818-1940251:+|nuORF;nc|ENSG00000108963|Q9BZG8-2|DPH1;ENSG00000108963|ENST00000263083|DPH1;nc|ENSG00000108963|Q9BZG8-1|DPH1	ENST00000572819.6_1_17:1939773-1940251:+|nuORF	ENST00000572819.6_1_17:1939773-1940251:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	426.763104	851.511654	-1.7258	-0.00073651	4.632	0.0019767	2.9062	0.0012402	426.7652049443837	70.954	0.73985	71.088	70.774	71.513	0.13356	-0.016983	0.00034243	NaN	35.201	41	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80284			42263	2443	28224	28237							0.07995874391178859
PPATALALV	9	Unmodified	_PPATALALV_					0	0	0		ENST00000572819.6_1_17:1939773-1940251:+|nuORF;ENST00000576129.5_1_17:1936818-1940251:+|nuORF;nc|ENSG00000108963|Q9BZG8-2|DPH1;ENSG00000108963|ENST00000263083|DPH1;nc|ENSG00000108963|Q9BZG8-1|DPH1	ENST00000572819.6_1_17:1939773-1940251:+|nuORF	ENST00000572819.6_1_17:1939773-1940251:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	426.763104	851.511654	-1.2598	-0.00053765	4.7719	0.0020365	3.512	0.0014988	426.76504574525507	71.171	0.70633	71.247	70.921	71.627	0.076225	0.14246	0.00046185	NaN	35.201	42	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79374			42264	2443	28224	28237							0.07995874391178859
PPATKKSAA	9	Unmodified	_PPATKKSAA_					0	0	0			REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7528991699219	2	435.75581	869.497067	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.707	1	82.134	81.634	82.634	0.42646								0	0	0	0.32159	1	9425	9425		23.042	0	1		+		42265	17250	28225	28238	47972	47972					0.0570980224304094
PPATLRCQCLV	11	Unmodified	_PPATLRCQCLV_					0	0	0		ENST00000355803.8_1_16:1376147-1376570:+|nuORF	ENST00000355803.8_1_16:1376147-1376570:+|nuORF	ENST00000355803.8_1_16:1376147-1376570:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	600.8220825195312	2	600.815018	1199.61548	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.486	1	60.494	59.994	60.994	0.0081177								0	0	0	0.56276	1	5241	5241		43.651	9.4782	1				42266	10356	28226	28239	47973	47973					0.0236609016485545
PPATNSLL	8	Unmodified	_PPATNSLL_					0	0	0		chr13:43055543-43068930|15|37.13|0.22|7.43|+|1|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|15;chr13:43055543-43065686|15|42.93|0.22|7.63|+|1|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|15	chr13:43055543-43068930|15|37.13|0.22|7.43|+|1|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|15	chr13:43055543-43068930|15|37.13|0.22|7.43|+|1|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7288513183594	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.87276	1	7555	7555		29.842	10.482	1	159770			42267	155	28227	28240	47974	47974					0.03070424460383947
PPATNVLL	8	Unmodified	_PPATNVLL_					0	0	0		ENSG00000156574|ENST00000287139|NODAL	ENSG00000156574|ENST00000287139|NODAL	ENSG00000156574|ENST00000287139|NODAL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7461853027344	2	412.747453	823.480354	-1.221	-0.00050397	-1.2134	-0.00050081	-2.4344	-0.0010048	412.7467805691387	85.252	3.325	85.252	83.926	87.251	0					125	76	4	0	0	0	0.87479	1	8065	8065		30.504	2.2494	1	835890			42268	5383	28228	28241	47975	47975					0.06155301357091503
PPATPTLPRL	10	Unmodified	_PPATPTLPRL_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8173217773438	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.77314	1	8555	8555		40.778	0.20554	1	1422300			42269	8027	28229	28242	47976	47976					0.09498308748334239
PPATPWPRGSR	11	Unmodified	_PPATPWPRGSR_					0	0	0			REV__ENST00000264051.7_2_2:233791801-233791873:-|nuORF	REV__ENST00000264051.7_2_2:233791801-233791873:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.7396545410156	3	407.887756	1220.64144	-1.9115	-0.00077969	2.6401	0.0010768	0.72853	0.00029716	408.222841905578	35.285	0.13418	35.324	35.239	35.373	0.038643					6	4	2	0	0	0	0.17273	1	1845	1845		29.551	12.833	1	22559	+		42270	24462	28230	28243	47977	47977					0.03994443723013319
PPATRGAR	8	Unmodified	_PPATRGAR_					0	0	0		ENST00000517894.5_3_8:143530803-143545560:+|nuORF	ENST00000517894.5_3_8:143530803-143545560:+|nuORF	ENST00000517894.5_3_8:143530803-143545560:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2371520996094	2	413.238119	824.461684	-1.33	-0.0005496	2.1463	0.00088694	0.81635	0.00033735	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.87064	1	7280	7280		29.15	2.3535	1	895630			42271	13110	28231	28244	47978	47978					0.04243184505901354
PPATRGAR	8	Unmodified	_PPATRGAR_					0	0	0		ENST00000517894.5_3_8:143530803-143545560:+|nuORF	ENST00000517894.5_3_8:143530803-143545560:+|nuORF	ENST00000517894.5_3_8:143530803-143545560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2371826171875	2	413.238119	824.461684	-0.12335	-5.0972E-05	0.56146	0.00023202	0.43812	0.00018105	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.85277	1	7448	7448		25.45	4.9683	1	1978800			42272	13110	28231	28244	47979	47979					0.04243184505901354
PPATRGAR	8	Unmodified	_PPATRGAR_					0	0	0		ENST00000517894.5_3_8:143530803-143545560:+|nuORF	ENST00000517894.5_3_8:143530803-143545560:+|nuORF	ENST00000517894.5_3_8:143530803-143545560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.237548828125	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.87922	1	7822	7822		31.955	6.5047	1	2127000			42273	13110	28231	28244	47980	47980					0.04243184505901354
PPATRGAR	8	Unmodified	_PPATRGAR_					0	0	0		ENST00000517894.5_3_8:143530803-143545560:+|nuORF	ENST00000517894.5_3_8:143530803-143545560:+|nuORF	ENST00000517894.5_3_8:143530803-143545560:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2378234863281	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.8621	1	7371	7371		26.693	7.3329	1	1341700			42274	13110	28231	28244	47981	47981					0.04243184505901354
PPATVHPALV	10	Unmodified	_PPATVHPALV_					0	0	0		ENSG00000088247|ENST00000600480|KHSRP	ENSG00000088247|ENST00000600480|KHSRP	ENSG00000088247|ENST00000600480|KHSRP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29010009765625	2	501.292559	1000.57057	-0.064942	-3.2555E-05	-4.2261	-0.0021185	-4.291	-0.002151	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.86589	1	8351	8351		29.15	4.6304	1	2854100			42275	1586	28232	28245	47982	47982					0.07030350685511166
PPATYGYG	8	Unmodified	_PPATYGYG_					0	0	0			REV__ENSG00000141367|ENST00000269122|CLTC	REV__ENSG00000141367|ENST00000269122|CLTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.1938171386719	2	413.192511	824.370469	-0.18763	-7.7529E-05	3.0689	0.0012681	2.8813	0.0011905	413.19367565265276	78.88	3.1143	78.936	78.489	81.603	0.056122					158	90	2	0	0	0	0.89457	1	7668	7668		37.028	7.8789	1	901690	+		42276	19676	28233	28246	47983	47983					-0.04874123982085621
PPATYGYG	8	Unmodified	_PPATYGYG_					0	0	0			REV__ENSG00000141367|ENST00000269122|CLTC	REV__ENSG00000141367|ENST00000269122|CLTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.1941833496094	2	413.192511	824.370469	0.11885	4.911E-05	2.7637	0.0011419	2.8825	0.001191	413.19356375040996	78.966	3.3342	78.912	78.52	81.854	-0.053558					185	96	2	0	0	0	0.89457	1	7921	7921		37.028	2.8559	1	948300	+		42277	19676	28233	28246	47984	47984					-0.04874123982085621
PPATYGYG	8	Unmodified	_PPATYGYG_					0	0	0			REV__ENSG00000141367|ENST00000269122|CLTC	REV__ENSG00000141367|ENST00000269122|CLTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.19415283203125	2	413.192511	824.370469	2.528	0.0010445	0.35782	0.00014785	2.8858	0.0011924	413.1925490682729	78.857	3.5308	78.908	78.449	81.979	0.051674					175	98	2	0	0	0	0.86791	4	7784	7764;7784;7802;7812		37.028	2.3883	1	994890	+		42278	19676	28233	28246	47985;47986;47987;47988	47986					-0.04874123982085621
PPATYGYG	8	Unmodified	_PPATYGYG_					0	0	0			REV__ENSG00000141367|ENST00000269122|CLTC	REV__ENSG00000141367|ENST00000269122|CLTC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.1943664550781	2	413.192511	824.370469	0.53899	0.00022271	2.2804	0.00094224	2.8194	0.001165	413.1933573635661	78.618	3.0297	78.757	78.334	81.364	0.13883					156	98	2	0	0	0	0.89457	1	7485	7485		37.028	5.4987	1	973800	+		42279	19676	28233	28246	47989	47989					-0.04874123982085621
PPATYGYG	8	Unmodified	_PPATYGYG_					0	0	0			REV__ENSG00000141367|ENST00000269122|CLTC	REV__ENSG00000141367|ENST00000269122|CLTC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.1942443847656	2	413.192511	824.370469	-1.6019	-0.00066191	4.426	0.0018288	2.8241	0.0011669	413.19424248280797	78.75	3.0447	78.844	78.417	81.462	0.0942					181	92	2	0	0	0	0.87276	1	7428	7428		29.842	1.5873	1	856750	+		42280	19676	28233	28246	47990	47990					-0.04874123982085621
PPAWVLDHR	9	Unmodified	_PPAWVLDHR_					0	0	0		ENST00000432045.6_1_7:130562562-130562694:-|nuORF	ENST00000432045.6_1_7:130562562-130562694:-|nuORF	ENST00000432045.6_1_7:130562562-130562694:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.316650390625	2	545.793258	1089.57196	0.74276	0.00040539	-3.9057	-0.0021317	-3.1629	-0.0017263	545.7918349651535	89.18	0.17162	89.332	89.225	89.396	0.1519					5	3	2	0	0	0	0.20789	1	8882	8882		18.324	0	1	41183			42281	11657	28234	28247	47991	47991					0.030759847742501734
PPCGKGQH	8	Unmodified	_PPCGKGQH_					0	0	0		ENST00000232496.4_1_3:50362655-50362814:-|nuORF	ENST00000232496.4_1_3:50362655-50362814:-|nuORF	ENST00000232496.4_1_3:50362655-50362814:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.17572021484375	2	412.197605	822.380657	-1.8018	-0.0007427	-0.42025	-0.00017322	-2.222	-0.00091592	412.1967596781059	94.731	0.41425	94.962	94.653	95.067	0.23103					13	9	2	0	0	0	0.4196	1	9659	9659		57.453	12.922	1	58914			42282	9217	28235	28248	47992	47992					-0.03763839528505741
PPCLQVLN	8	Unmodified	_PPCLQVLN_					0	0	0		nc|ENSG00000101187|Q96BD0-3|SLCO4A1;nc|ENSG00000101187|Q96BD0-4|SLCO4A1;ENSG00000101187|ENST00000217159|SLCO4A1;nc|ENSG00000101187|Q96BD0-2|SLCO4A1	nc|ENSG00000101187|Q96BD0-3|SLCO4A1	nc|ENSG00000101187|Q96BD0-3|SLCO4A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.24078369140625	2	442.238938	882.463324	1.3093	0.00057901	3.1237	0.0013814	4.433	0.0019604	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.87922	2	8210	8043;8210		35.201	1.6851	1	1244000			42283	1905	28236	28249	47993;47994	47994					0.01739057479630901
PPCLQVLN	8	Unmodified	_PPCLQVLN_					0	0	0		nc|ENSG00000101187|Q96BD0-3|SLCO4A1;nc|ENSG00000101187|Q96BD0-4|SLCO4A1;ENSG00000101187|ENST00000217159|SLCO4A1;nc|ENSG00000101187|Q96BD0-2|SLCO4A1	nc|ENSG00000101187|Q96BD0-3|SLCO4A1	nc|ENSG00000101187|Q96BD0-3|SLCO4A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2404479980469	2	442.238938	882.463324	0.21245	9.3954E-05	4.1992	0.0018571	4.4117	0.001951	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.91005	1	9300	9300		42.474	1.6963	1	1030200			42284	1905	28236	28249	47995	47995					0.01739057479630901
PPCPVAVGLL	10	Unmodified	_PPCPVAVGLL_					0	0	0		ENST00000439332.1_1:144301126-144301291:-|nuORF;ENST00000441423.1_1:144300626-144301291:-|nuORF	ENST00000439332.1_1:144301126-144301291:-|nuORF	ENST00000439332.1_1:144301126-144301291:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.2779846191406	2	483.278063	964.541574	-0.091589	-4.4263E-05	1.604	0.00077519	1.5124	0.00073093	483.2788975333247	95.387	2.1171	95.453	94.837	96.954	0.06591					117	49	3	0	0	0	0.86786	1	10079	10079		26.796	2.2921	1	1245700			42285	11761	28237	28250	47996	47996					0.05788490064878715
PPCRWTTF	8	Unmodified	_PPCRWTTF_					0	0	0		ENST00000431078.1_1_2:125530453-125530573:+|nuORF	ENST00000431078.1_1_2:125530453-125530573:+|nuORF	ENST00000431078.1_1_2:125530453-125530573:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.6828918457031	2	504.242012	1006.46947	1.2297	0.00062008	-1.6731	-0.00084363	-0.44334	-0.00022355	504.24129795199735	97.914	0.49226	98.299	98.057	98.549	0.38548					16	11	2	0	0	0	0.4196	1	11774	11774		20.482	1.1219	1	102730			42286	11641	28238	28251	47997	47997					-0.033504242888511726
PPCTCTFSA	9	Carbamidomethyl (C)	_PPCTC(Carbamidomethyl (C))TFSA_	PPC(0.023)TC(0.977)TFSA		PPC(-16)TC(16)TFSA		0	1	0			REV__ENSG00000074181|ENST00000263388|NOTCH3	REV__ENSG00000074181|ENST00000263388|NOTCH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.20147705078125	2	492.201696	982.388838	-0.58605	-0.00028845	0.53716	0.00026439	-0.048885	-2.4061E-05	492.20177357844017	58.229	1.2673	58.213	57.861	59.128	-0.016426					105	54	3	0	0	0	0.47272	1	4956	4956		53.351	12.573	2	335890	+		42287	16686	28239	28252	47998	47998	223				-0.10306073394053783
PPCVPVLL	8	Unmodified	_PPCVPVLL_					0	0	0		ENST00000489097.5_1_1:6526697-6527309:-|nuORF	ENST00000489097.5_1_1:6526697-6527309:-|nuORF	ENST00000489097.5_1_1:6526697-6527309:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2970886230469	2	419.248775	836.482997	-0.27863	-0.00011681	3.4493	0.0014461	3.1706	0.0013293	419.24951042104334	62.819	0.78054	63.207	62.578	63.358	0.38779					21	17	2	0	0	0	0.4196	1	6677	6677		10.185	0	1	36658			42288	12644	28240	28253	47999	47999					0.0582143349040507
PPCVSKGR	8	Unmodified	_PPCVSKGR_					0	0	0			REV__ENSG00000086102|ENST00000379540|NFX1	REV__ENSG00000086102|ENST00000379540|NFX1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2278137207031	2	422.228905	842.443257	-1.6383	-0.00069172	-0.9288	-0.00039217	-2.5671	-0.0010839	422.22843886781163	56.746	0.50715	56.746	56.45	56.957	0					41	24	2	0	0	0	0.84341	1	4853	4853		24.203	5.8783	1	414110	+		42289	16906	28241	28254	48000	48000					0.01573306539683017
PPDPSHLIIA	10	Unmodified	_PPDPSHLIIA_					0	0	0			REV__ENST00000538091.1_1_11:113569612-113570777:-|nuORF	REV__ENST00000538091.1_1_11:113569612-113570777:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2935791015625	2	530.295299	1058.57605	-0.73575	-0.00039016	-2.8196	-0.0014952	-3.5553	-0.0018854	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.71042	1	8859	8859		44.117	6.3053	1	1390700	+		42290	28433	28242	28255	48001	48001					0.049100294773325004
PPDQSEVLIVD	11	Unmodified	_PPDQSEVLIVD_					0	0	0			REV__ENSG00000174460|ENST00000310164|ZCCHC12	REV__ENSG00000174460|ENST00000310164|ZCCHC12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.87255859375	2	606.311343	1210.60813	-0.03282	-1.9899E-05	3.026	0.0018347	2.9932	0.0018148	606.3131118513745	100.01	0.61876	100.06	99.676	100.3	0.047531					14	13	2	0	0	0	0.17062	1	10746	10746		54.722	14.664	1	45849	+		42291	21994	28243	28256	48002	48002					0.01125352369808752
PPDSSRRL	8	Unmodified	_PPDSSRRL_					0	0	0			REV__nc|ENSG00000152463|Q9NV23-2|OLAH	REV__nc|ENSG00000152463|Q9NV23-2|OLAH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2539367675781	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.90983	1	8291	8291		42.396	8.8806	1	1482000	+		42292	29933	28244	28257	48003	48003					0.027191324691784757
PPEASVLL	8	Unmodified	_PPEASVLL_					0	0	0		nc|ENSG00000186575|P35240-2|NF2;nc|ENSG00000186575|P35240-9|NF2;nc|ENSG00000186575|P35240-10|NF2;nc|ENSG00000186575|P35240-7|NF2;nc|ENSG00000186575|P35240-4|NF2;nc|ENSG00000186575|P35240-6|NF2;nc|ENSG00000186575|P35240-5|NF2;nc|ENSG00000186575|P35240-8|NF2;nc|ENSG00000186575|P35240-3|NF2;ENSG00000186575|ENST00000338641|NF2	nc|ENSG00000186575|P35240-2|NF2	nc|ENSG00000186575|P35240-2|NF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2369384765625	2	413.239461	824.46437	-1.5467	-0.00063915	0.5911	0.00024426	-0.95558	-0.00039489	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.86288	1	7522	7522		26.796	1.3459	1	1341700			42293	15160	28245	28258	48004	48004					0.04511595120197853
PPEAVILS	8	Unmodified	_PPEAVILS_					0	0	0		ENST00000573685.5_1_16:68573279-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2369384765625	2	413.239461	824.46437	-1.3714	-0.00056672	-1.4151	-0.00058475	-2.7865	-0.0011515	413.2388028419787	75.095	1.9798	75.095	74.071	76.051	0					127	77	2	0	0	0	0.90465	1	6782	6782		40.573	1.7665	1	222450			42294	14023	28246	28259	48005	48005					0.04511595120197853
PPEAVILS	8	Unmodified	_PPEAVILS_					0	0	0		ENST00000573685.5_1_16:68573279-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	413.239461	824.46437	0.37664	0.00015564	-3.1375	-0.0012965	-2.7608	-0.0011409	413.23811083346715	74.345	2.1201	74.736	73.87	75.99	0.3911	-0.1725	-0.00088965	NaN	40.573	78	52	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	265050			42295	14023	28246	28259							0.04511595120197853
PPEAVILS	8	Unmodified	_PPEAVILS_					0	0	0		ENST00000573685.5_1_16:68573279-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	ENST00000573685.5_1_16:68573279-68591907:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	413.239461	824.46437	-0.023261	-9.6122E-06	-2.8088	-0.0011607	-2.832	-0.0011703	413.2382192499727	74.335	1.9368	74.894	74.083	76.02	0.5589	-0.014451	-0.00061799	NaN	40.573	103	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254890			42296	14023	28246	28259							0.04511595120197853
PPEELAVEEPE	11	Unmodified	_PPEELAVEEPE_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.1943359375	2	619.792983	1237.57141	0.78899	0.00048901	0.41014	0.0002542	1.1991	0.00074321	619.7931183763103	52.11	0.48928	52.778	52.596	53.086	0.66729					17	11	2	0	0	0	0.17502	1	5201	5201		29.17	6.5904	1	619800	+		42297	20437;29946	28247	28260	48006	48006					-0.03786944246780877
PPEELAVEEPE	11	Unmodified	_PPEELAVEEPE_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	619.792983	1237.57141	0.084166	5.2166E-05	1.2024	0.00074525	1.2866	0.00079742	619.7936060295172	52.363	0.41611	52.786	52.596	53.012	0.42348	0.004324	0.0002326	NaN	29.17	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	617990	+		42298	20437;29946	28247	28260							-0.03786944246780877
PPELPPRNI	9	Unmodified	_PPELPPRNI_					0	0	0		nc|ENSG00000168918|Q92835-2|INPP5D;ENSG00000168918|ENST00000445964|INPP5D;ENST00000496402.2_1_2:233990465-233995359:+|nuORF	nc|ENSG00000168918|Q92835-2|INPP5D	nc|ENSG00000168918|Q92835-2|INPP5D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.793212890625	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.7932	1	8756	8756		24.203	2.2429	1	817800			42299	6451	28248	28261	48007	48007					0.06185449197187154
PPETRCAPP	9	Unmodified	_PPETRCAPP_					0	0	0			REV__ENST00000518025.5_1_5:141017849-141019494:+|nuORF	REV__ENST00000518025.5_1_5:141017849-141019494:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.2362060546875	2	484.236927	966.459301	-1.0498	-0.00050838	-0.56064	-0.00027148	-1.6105	-0.00077986	484.23660719413385	85.163	0.60972	85.223	84.849	85.459	0.05912					43	13	4	0	0	0	0.43338	1	8623	8623		55.504	5.4797	1	1253500	+		42300	28059	28249	28262	48008	48008					-0.025270320140975855
PPFLFYTN	8	Unmodified	_PPFLFYTN_					0	0	0			REV__ENST00000367279.8_1_1:202128675-202129107:-|nuORF	REV__ENST00000367279.8_1_1:202128675-202129107:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.29949951171875	2	499.752736	997.490919	-0.017156	-8.5738E-06	-3.6878	-0.001843	-3.705	-0.0018516	499.75080809218156	77.707	0.73814	78.276	77.968	78.706	0.56836					40	17	3	0	0	0	0.4196	1	8863	8863		8.8223	0	1	1022300	+		42301	25560	28250	28263	48009	48009					-0.007927159884843604
PPFLRAGEERQ	11	Unmodified	_PPFLRAGEERQ_					0	0	0		ENST00000333957.8_1_12:22697022-22697471:-|nuORF	ENST00000333957.8_1_12:22697022-22697471:-|nuORF	ENST00000333957.8_1_12:22697022-22697471:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.8984375	3	433.898321	1298.67313	0.56349	0.0002445	-0.57225	-0.0002483	-0.0087617	-3.8017E-06	433.8979358306318	19.865	0.70017	19.395	19.113	19.813	-0.46967					40	14	4	0	0	0	0.58516	1	565	565		45.908	1.2687	1	460470			42302	10140	28251	28264	48010	48010					0.035743916863111735
PPFPRVHVI	9	Unmodified	_PPFPRVHVI_					0	0	0		ENST00000570025.1_1_16:30887022-30887076:+|nuORF	ENST00000570025.1_1_16:30887022-30887076:+|nuORF	ENST00000570025.1_1_16:30887022-30887076:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7788696289062	2	531.316369	1060.61818	0.4932	0.00026205	-1.02	-0.00054194	-0.52679	-0.00027989	531.314986608431	56.816	0.20899	57.371	57.27	57.479	0.55512					6	4	2	0	0	0	0.20789	1	5892	5892		42.474	0	1	62762			42303	13991	28252	28265	48011	48011					0.09030049676357521
PPGAAAPLLLP	11	Unmodified	_PPGAAAPLLLP_					0	0	0		ENST00000216452.8_1_14:68060595-68066891:-|nuORF;ENST00000559581.5_1_14:68060475-68066891:-|nuORF;ENST00000559415.1_2_14:68060475-68066891:-|nuORF	ENST00000216452.8_1_14:68060595-68066891:-|nuORF	ENST00000216452.8_1_14:68060595-68066891:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.8077087402344	2	508.810585	1015.60662	-0.95318	-0.00048499	-4.4844	-0.0022817	-5.4376	-0.0027667	508.8082107511822	83.728	2.644	83.728	82.933	85.577	0					147	63	5	0	0	0	0.69735	2	7915	7915;7928		31.955	7.7521	1	4920100			42304	9139	28253	28266	48012;48013	48012					0.09943807862362064
PPGAPKPPPAS	11	Unmodified	_PPGAPKPPPAS_					0	0	0		nc|ENSG00000104973|Q71SY5-6|MED25;nc|ENSG00000104973|Q71SY5-5|MED25;ENSG00000104973|ENST00000312865|MED25;nc|ENSG00000104973|Q71SY5-4|MED25	nc|ENSG00000104973|Q71SY5-6|MED25	nc|ENSG00000104973|Q71SY5-6|MED25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.280029296875	2	508.282192	1014.54983	-0.055639	-2.828E-05	-3.7761	-0.0019193	-3.8318	-0.0019476	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.66929	2	8958	8958;9089		36.447	2.2742	1	1918800			42305	2175	28254	28267	48014;48015	48014					0.043137603058426066
PPGAPKPPPAS	11	Unmodified	_PPGAPKPPPAS_					0	0	0		nc|ENSG00000104973|Q71SY5-6|MED25;nc|ENSG00000104973|Q71SY5-5|MED25;ENSG00000104973|ENST00000312865|MED25;nc|ENSG00000104973|Q71SY5-4|MED25	nc|ENSG00000104973|Q71SY5-6|MED25	nc|ENSG00000104973|Q71SY5-6|MED25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.27996826171875	2	508.282192	1014.54983	0.22565	0.0001147	-4.0704	-0.0020689	-3.8448	-0.0019542	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.60058	1	9044	9044		44.377	6.5657	1	1820400			42306	2175	28254	28267	48016	48016					0.043137603058426066
PPGAPKPPPAS	11	Unmodified	_PPGAPKPPPAS_					0	0	0		nc|ENSG00000104973|Q71SY5-6|MED25;nc|ENSG00000104973|Q71SY5-5|MED25;ENSG00000104973|ENST00000312865|MED25;nc|ENSG00000104973|Q71SY5-4|MED25	nc|ENSG00000104973|Q71SY5-6|MED25	nc|ENSG00000104973|Q71SY5-6|MED25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.2797546386719	2	508.282192	1014.54983	-0.39652	-0.00020155	-3.6656	-0.0018632	-4.0621	-0.0020647	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.65746	2	8674	8674;8832		37.812	2.1932	1	2080300			42307	2175	28254	28267	48017;48018	48017					0.043137603058426066
PPGAPKPPPAS	11	Unmodified	_PPGAPKPPPAS_					0	0	0		nc|ENSG00000104973|Q71SY5-6|MED25;nc|ENSG00000104973|Q71SY5-5|MED25;ENSG00000104973|ENST00000312865|MED25;nc|ENSG00000104973|Q71SY5-4|MED25	nc|ENSG00000104973|Q71SY5-6|MED25	nc|ENSG00000104973|Q71SY5-6|MED25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2799072265625	2	508.282192	1014.54983	-0.38511	-0.00019575	-3.5589	-0.0018089	-3.944	-0.0020047	508.28029410514995	88.272	2.579	88.735	87.686	90.265	0.46312					198	63	4	0	0	0	0.51007	1	10441	10441		51.193	7.0759	1	2008000			42308	2175	28254	28267	48019	48019					0.043137603058426066
PPGAPPPSLI	10	Unmodified	_PPGAPPPSLI_					0	0	0		ENST00000513008.5_1_4:54292015-54325613:+|nuORF;nc|ENSG00000145216|Q6UN15-3|FIP1L1;ENST00000505125.5_1_4:54245288-54325613:+|nuORF;nc|ENSG00000145216|Q6UN15-5|FIP1L1;ENSG00000145216|ENST00000337488|FIP1L1	ENST00000513008.5_1_4:54292015-54325613:+|nuORF	ENST00000513008.5_1_4:54292015-54325613:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.9710693359375	2	473.273835	944.533118	-0.98874	-0.00046794	2.447	0.0011581	1.4583	0.00069017	473.2757842182384	50.781	0.40297	50.789	50.607	51.01	0.0077438					24	16	2	0	0	0	0.37624	1	4332	4332		16.473	3.514	1	130780			42309	4753	28255	28268	48020	48020					0.05863259419891165
PPGARGKRTH	10	Unmodified	_PPGARGKRTH_					0	0	0			REV__ENST00000471948.5_1_2:263285-263645:-|nuORF	REV__ENST00000471948.5_1_2:263285-263645:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.8067626953125	2	538.807231	1075.59991	-0.16838	-9.0727E-05	-0.74988	-0.00040404	-0.91826	-0.00049477	538.8067545662908	90.656	4.0484	90.725	89.127	93.176	0.069336					223	95	3	0	0	0	0.86763	1	9287	9287		26.693	1.1189	1	849020	+		42310	27247	28256	28269	48021	48021					0.06513307754380548
PPGARTRA	8	Unmodified	_PPGARTRA_					0	0	0		ENSG00000165355|ENST00000298097|FBXO33	ENSG00000165355|ENST00000298097|FBXO33	ENSG00000165355|ENST00000298097|FBXO33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2374267578125	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.84341	1	7304	7304		24.203	0	1	2127000			42311	6074	28257	28270	48022	48022					0.04243184505889985
PPGDTAMH	8	Unmodified	_PPGDTAMH_					0	0	0		ENSG00000106952|ENST00000223795|TNFSF8	ENSG00000106952|ENST00000223795|TNFSF8	ENSG00000106952|ENST00000223795|TNFSF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.18414306640625	2	413.18162	824.348688	2.34	0.00096685	1.7124	0.00070753	4.0524	0.0016744	413.18263814360023	99.934	1.4742	100.27	99.852	101.33	0.33294					93	36	4	0	0	0	0.86791	1	12077	12077		28.254	0	1	6186100			42312	2324	28258	28271	48023	48023					-0.07051252002304409
PPGGALVGCL	10	Unmodified	_PPGGALVGCL_					0	0	0			REV__ENST00000372733.3_1_20:43955353-43955551:-|nuORF	REV__ENST00000372733.3_1_20:43955353-43955551:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2408752441406	2	442.238938	882.463324	1.3093	0.00057901	3.1237	0.0013814	4.433	0.0019604	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.85976	1	8150	8150		35.201	4.6971	1	1244000	+		42313	25729	28259	28272	48024	48024					0.017390574796422698
PPGGGGGV	8	Unmodified	_PPGGGGGV_					0	0	0		ENST00000362058.2_2_1:16957286-16958865:-|nuORF	ENST00000362058.2_2_1:16957286-16958865:-|nuORF	ENST00000362058.2_2_1:16957286-16958865:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8557739257812	1	597.299101	596.291825	-0.4521	-0.00027004	-0.58611	-0.00035008	-1.0382	-0.00062012	597.3010993416781	92.812	0.41879	92.858	92.539	92.958	0.045448					14	9	2	0	0	0	0.4196	1	9667	9667		5.0869	0	1	31207			42314	10501	28260	28273	48025	48025					-0.022469314965178455
PPGGILAMAT	10	Unmodified	_PPGGILAMAT_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2539367675781	2	464.252046	926.489538	0.61869	0.00028723	3.7395	0.0017361	4.3582	0.0020233	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.86452	1	8216	8216		30.504	3.8107	1	1482000	+		42315	21140	28261	28274	48026	48026					0.02335326651120795
PPGGPRRLHL	10	Unmodified	_PPGGPRRLHL_					0	0	0			REV__nc|ENSG00000154914|Q70EL4-3|USP43	REV__nc|ENSG00000154914|Q70EL4-3|USP43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.3268432617188	2	550.327799	1098.64105	-0.4914	-0.00027043	-0.76835	-0.00042284	-1.2598	-0.00069328	550.3274966608972	100.46	1.192	100.46	99.887	101.08	0					71	27	3	0	0	0	0.85694	1	10211	10211		21.96	2.8564	1	339490	+		42316	20407	28262	28275	48027	48027					0.0956706879385365
PPGGRKMTVF	10	Unmodified	_PPGGRKMTVF_					0	0	0		nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8;ENSG00000124721|ENST00000327475|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3165283203125	2	545.297319	1088.58008	0.15566	8.4884E-05	-2.2872	-0.0012472	-2.1315	-0.0011623	545.7967494634372	90.191	1.3157	90.404	89.389	90.705	0.21271					43	30	3	0	0	0	0.37624	1	8938	8938		34.173	15.848	1	144030			42317	3354	28263	28276	48028	48028					0.03933795699413167
PPGIPGLPGPN	11	Unmodified	_PPGIPGLPGPN_					0	0	0			REV__chr2:189066433-189079080|50|11.52|0.18|5.98|-|ENST00000618828|COL5A2,COL5A2	REV__chr2:189066433-189079080|50|11.52|0.18|5.98|-|ENST00000618828|COL5A2,COL5A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2798767089844	2	508.282192	1014.54983	-0.88176	-0.00044818	-2.9285	-0.0014885	-3.8102	-0.0019367	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.67493	1	8648	8648		35.618	7.5368	1	1261800	+		42318	15743	28264	28277	48029	48029					0.04313760305853975
PPGKRGRQAPT	11	Unmodified	_PPGKRGRQAPT_					0	0	0			REV__ENST00000590799.5_2_17:76126869-76127580:+|nuORF	REV__ENST00000590799.5_2_17:76126869-76127580:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.832763671875	2	582.833446	1163.65234	0.7163	0.00041749	-1.996	-0.0011633	-1.2797	-0.00074584	582.8322944715994	93.943	3.3707	94.171	93.279	96.65	0.22863					214	80	3	0	0	0	0.61369	1	9602	9602		42.864	12.361	1	862210	+		42319	29183	28265	28278	48030	48030					0.07705846097314861
PPGKSPGKTTF	11	Unmodified	_PPGKSPGKTTF_					0	0	0		ENST00000454715.5_1_3:196065156-196065342:-|nuORF	ENST00000454715.5_1_3:196065156-196065342:-|nuORF	ENST00000454715.5_1_3:196065156-196065342:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.802490234375	2	558.806031	1115.59751	-0.74661	-0.00041721	-2.7929	-0.0015607	-3.5395	-0.0019779	558.8044185395656	31.08	0.50536	31.098	30.879	31.384	0.018362					21	12	3	0	0	0	0.69931	1	1646	1646		31.634	1.3165	1	46336			42320	11944	28266	28279	48031	48031					0.04433414506047484
PPGLRIHLE	9	Unmodified	_PPGLRIHLE_					0	0	0			REV__ENST00000557789.5_1_15:64446752-64447019:+|nuORF	REV__ENST00000557789.5_1_15:64446752-64447019:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3020629882812	2	516.303458	1030.59236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.43	1	62.551	62.051	63.051	0.1209								0	0	0	0.28386	1	5442	5442		37.159	4.3467	1		+		42321	28721	28267	28280	48032	48032					0.07829155434069435
PPGMKQQVLVF	11	Unmodified	_PPGMKQQVLVF_					0	0	0		ENSG00000151553|ENST00000369248|FHIP2A;nc|ENSG00000151553|Q5W0V3-2|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	622.3462524414062	2	622.347009	1242.67946	1.3041	0.0008116	-0.75803	-0.00047176	0.54607	0.00033985	622.3465977924652	95.841	2.6338	96.072	95.148	97.782	0.23103					155	62	3	0	0	0	0.68378	1	9866	9866		34.173	0.25091	1	379700			42322	5125	28268	28281	48033	48033					0.0678319359346915
PPGPGPHLLPS	11	Unmodified	_PPGPGPHLLPS_					0	0	0		ENST00000560542.1_1_14:24633743-24634393:+|nuORF;ENST00000561415.1_1_14:24633725-24635402:+|nuORF;ENSG00000213928|ENST00000396864|IRF9	ENST00000560542.1_1_14:24633743-24634393:+|nuORF	ENST00000560542.1_1_14:24633743-24634393:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.795166015625	2	534.795466	1067.57638	-1.6021	-0.00085681	1.5908	0.00085076	-0.011304	-6.0455E-06	534.7961451235103	29.642	3.4749	29.642	28.953	32.428	0					302	131	4	0	0	0	0.72918	1	1355	1355		26.693	0	1	542890			42323	8608	28269	28282	48034	48034					0.045294491971844764
PPGPKEIVLID	11	Unmodified	_PPGPKEIVLID_					0	0	0			REV__ENSG00000133055|ENST00000255416|MYBPH	REV__ENSG00000133055|ENST00000255416|MYBPH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3424072265625	2	589.344989	1176.67542	-0.65315	-0.00038493	-3.1619	-0.0018634	-3.815	-0.0022484	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.7144	1	9746	9746		29.17	0	1	5584100	+		42324	19052	28270	28283	48035	48035					0.09415427371436635
PPGPPGLPGF	10	Unmodified	_PPGPPGLPGF_					0	0	0		nc|ENSG00000188153|P29400|COL4A5;ENSG00000188153|ENST00000328300|COL4A5;ENST00000483338.1_1_X:107826116-107869594:+|nuORF;ENST00000489611.5_1_6:70926602-70990065:-|nuORF;nc|ENSG00000112280|P20849-2|COL9A1;ENSG00000112280|ENST00000357250|COL9A1;ENST00000486080.5_1_6:70926602-70955360:-|nuORF	nc|ENSG00000188153|P29400|COL4A5;ENST00000489611.5_1_6:70926602-70990065:-|nuORF	ENST00000489611.5_1_6:70926602-70990065:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.256103515625	2	468.252903	934.491253	0.516	0.00024162	3.6072	0.0016891	4.1232	0.0019307	468.25439307684206	81.814	3.5851	81.751	80.618	84.204	-0.062943					157	83	2	0	0	0	0.85976	1	8470	8470		35.201	1.2791	1	180670			42325	7908;2648	28271	28284	48036	48036					0.021387037313843393
PPGPPGQILTI	11	Unmodified	_PPGPPGQILTI_					0	0	0			REV__nc|ENSG00000038945|P21757-2|MSR1	REV__nc|ENSG00000038945|P21757-2|MSR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3170166015625	2	545.318774	1088.623	0.15577	8.4944E-05	-3.7365	-0.0020376	-3.5808	-0.0019527	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.67778	1	9281	9281		35.152	2.3396	1	17220000	+		42326	16307	28272	28285	48037	48037					0.08222889028479585
PPGPPGQILTI	11	Unmodified	_PPGPPGQILTI_					0	0	0			REV__nc|ENSG00000038945|P21757-2|MSR1	REV__nc|ENSG00000038945|P21757-2|MSR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3169555664062	2	545.318774	1088.623	-1.465	-0.00079892	-2.4047	-0.0013113	-3.8697	-0.0021102	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.72106	1	8602	8602		28.081	1.3886	1	4998200	+		42327	16307	28272	28285	48038	48038					0.08222889028479585
PPGPPGQLGLL	11	Unmodified	_PPGPPGQLGLL_					0	0	0			REV__nc|ENSG00000169436|Q8NFW1-3|COL22A1	REV__nc|ENSG00000169436|Q8NFW1-3|COL22A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303466796875	2	523.305667	1044.59678	-0.041393	-2.1661E-05	-4.0495	-0.0021191	-4.0909	-0.0021408	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.69995	1	8817	8817		31.53	3.4483	1	3850300	+		42328	21580	28273	28286	48039	48039					0.0762661985700106
PPGPPGQLGLL	11	Unmodified	_PPGPPGQLGLL_					0	0	0			REV__nc|ENSG00000169436|Q8NFW1-3|COL22A1	REV__nc|ENSG00000169436|Q8NFW1-3|COL22A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3032836914062	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.6921	1	8883	8883		32.812	3.6629	1	12189000	+		42329	21580	28273	28286	48040	48040					0.0762661985700106
PPGPPGQPG	9	Unmodified	_PPGPPGQPG_					0	0	0		nc|ENSG00000084636|Q07092-2|COL16A1;ENSG00000169436|ENST00000303045|COL22A1;nc|ENSG00000169436|Q8NFW1-2|COL22A1;ENSG00000084636|ENST00000373672|COL16A1;ENSG00000204291|ENST00000375001|COL15A1;nc|ENSG00000169436|Q8NFW1-3|COL22A1;ENST00000341807.8_1_8:139601498-139734429:-|nuORF;ENST00000488128.6_1_1:32121928-32135507:-|nuORF	REV__nc|ENSG00000060718|P12107-2|COL11A1;REV__ENSG00000050767|ENST00000390654|COL23A1;REV__ENSG00000182871|ENST00000651438|COL18A1;REV__nc|ENSG00000182871|P39060|COL18A1	REV__nc|ENSG00000060718|P12107-2|COL11A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.2049255371094	2	402.205953	802.397353	2.2889	0.00092062	-2.9581	-0.0011898	-0.66913	-0.00026913	402.20469632638094	98.499	3.236	98.444	96.673	99.909	-0.054817					141	75	3	0	0	0	0.49378	1	10578	10578		52.299	2.2746	1	1723900	+		42330	15406;16379;22557;30082	28274	28287	48041	48041					-0.011750153708931066
PPGPQGPGP	9	Unmodified	_PPGPQGPGP_					0	0	0		ENST00000330794.8_1_5:138860469-138860801:-|nuORF	ENST00000330794.8_1_5:138860469-138860801:-|nuORF	ENST00000330794.8_1_5:138860469-138860801:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.2054443359375	2	402.205953	802.397353	-0.18632	-7.4938E-05	-0.51168	-0.0002058	-0.698	-0.00028074	402.20569515988933	98.659	2.0984	98.708	97.873	99.972	0.04982					129	48	4	0	0	0	0.76402	1	10431	10431		35.201	1.6851	1	1555200			42331	10114	28275	28288	48042	48042					-0.011750153708931066
PPGRPPLA	8	Unmodified	_PPGRPPLA_					0	0	0			REV__ENST00000395756.5_1_17:17718546-17719313:-|nuORF	REV__ENST00000395756.5_1_17:17718546-17719313:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.7384948730469	2	402.739963	803.465373	-1.9023	-0.00076612	-0.36046	-0.00014517	-2.2627	-0.00091129	402.73969487917356	40.397	0.80037	40.404	40.114	40.914	0.0065041					72	28	4	0	0	0	0.80963	1	2560	2560		15.636	0	1	562560	+		42332	26122	28276	28289	48043	48043					0.05577854279749772
PPGSPPAAI	9	Unmodified	_PPGSPPAAI_					0	0	0		ENSG00000187135|ENST00000335523|VSTM2B	ENSG00000187135|ENST00000335523|VSTM2B	ENSG00000187135|ENST00000335523|VSTM2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.7239990234375	2	403.723978	805.433404	0.40958	0.00016536	-0.076812	-3.1011E-05	0.33277	0.00013435	403.72380872064997	64.881	1.7093	65.005	63.854	65.563	0.12396					144	69	3	0	0	0	0.5393	1	5734	5734		50.025	2.1089	1	1091100			42333	7843	28277	28290	48044	48044					0.022904418059511045
PPGTAPLRPL	10	Unmodified	_PPGTAPLRPL_					0	0	0		ENST00000506955.5_1_5:176980683-176980869:-|nuORF	ENST00000506955.5_1_5:176980683-176980869:-|nuORF	ENST00000506955.5_1_5:176980683-176980869:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8036193847656	2	509.805834	1017.59712	0.075306	3.8391E-05	-4.2119	-0.0021473	-4.1366	-0.0021089	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.86589	1	8484	8484		29.15	0	1	958280			42334	12948	28278	28291	48045	48045					0.08902039576844345
PPGTLLFRT	9	Unmodified	_PPGTLLFRT_					0	0	0		ENST00000432587.6_1_1:168014203-168014425:+|nuORF	ENST00000432587.6_1_1:168014203-168014425:+|nuORF	ENST00000432587.6_1_1:168014203-168014425:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2901611328125	2	501.292559	1000.57057	-0.94239	-0.00047241	-3.1642	-0.0015862	-4.1066	-0.0020586	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.78058	1	8173	8173		30.504	1.3541	1	6939200			42335	11672	28279	28292	48046	48046					0.07030350685522535
PPGTLLFRT	9	Unmodified	_PPGTLLFRT_					0	0	0		ENST00000432587.6_1_1:168014203-168014425:+|nuORF	ENST00000432587.6_1_1:168014203-168014425:+|nuORF	ENST00000432587.6_1_1:168014203-168014425:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904052734375	2	501.292559	1000.57057	-0.52377	-0.00026256	-3.845	-0.0019275	-4.3688	-0.00219	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.76764	1	8598	8598		34.173	3.6689	1	2929300			42336	11672	28279	28292	48047	48047					0.07030350685522535
PPGTLLFRT	9	Unmodified	_PPGTLLFRT_					0	0	0		ENST00000432587.6_1_1:168014203-168014425:+|nuORF	ENST00000432587.6_1_1:168014203-168014425:+|nuORF	ENST00000432587.6_1_1:168014203-168014425:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904968261719	2	501.292559	1000.57057	-0.36653	-0.00018374	-3.8537	-0.0019318	-4.2202	-0.0021156	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.78058	1	9030	9030		30.504	0	1	9903700			42337	11672	28279	28292	48048	48048					0.07030350685522535
PPGYKAKPN	9	Unmodified	_PPGYKAKPN_					0	0	0		ENST00000471578.5_1_1:224734560-224753960:+|nuORF	ENST00000471578.5_1_1:224734560-224753960:+|nuORF	ENST00000471578.5_1_1:224734560-224753960:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2671813964844	2	486.269084	970.523616	-1.0289	-0.00050034	-2.8077	-0.0013653	-3.8366	-0.0018656	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.72402	1	8247	8247		38.806	0.99462	1	1182200			42338	12245	28280	28293	48049	48049					0.037174911343640815
PPGYKAKPN	9	Unmodified	_PPGYKAKPN_					0	0	0		ENST00000471578.5_1_1:224734560-224753960:+|nuORF	ENST00000471578.5_1_1:224734560-224753960:+|nuORF	ENST00000471578.5_1_1:224734560-224753960:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.2669982910156	2	486.269084	970.523616	-0.087647	-4.262E-05	-3.8323	-0.0018635	-3.9199	-0.0019061	486.26710603472304	86.356	4.0954	86.423	85.117	89.212	0.067444					314	95	4	0	0	0	0.64922	1	8753	8753		44.117	9.9443	1	1700900			42339	12245	28280	28293	48050	48050					0.037174911343640815
PPGYLLIGKVH	11	Unmodified	_PPGYLLIGKVH_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3583984375	2	597.355691	1192.69683	3.0849	0.0018428	1.4245	0.00085092	4.5094	0.0026937	597.3562180293547	100.36	3.052	100.31	99.202	102.25	-0.052116					175	71	4	0	0	0	0.72918	1	10864	10864		26.693	4.733	1	3981300	+		42340	16685	28281	28294	48051	48051					0.10818857190793096
PPHNIIKSTIY	11	Unmodified	_PPHNIIKSTIY_					0	0	0			REV__ENST00000376511.6_1_6:30584481-30584577:-|nuORF	REV__ENST00000376511.6_1_6:30584481-30584577:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.860107421875	2	641.861338	1281.70812	1.706	0.001095	-4.3678	-0.0028035	-2.6617	-0.0017085	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.65746	1	12785	12785		37.812	3.8899	1	27133000	+		42341	25838	28282	28295	48052	48052					0.07853634494313155
PPHPAPPKS	9	Unmodified	_PPHPAPPKS_					0	0	0			REV__ENST00000374024.3_1_1:27721341-27721638:+|nuORF	REV__ENST00000374024.3_1_1:27721341-27721638:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25274658203125	2	464.255977	926.497401	-1.1813	-0.00054845	-2.9805	-0.0013837	-4.1619	-0.0019322	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.78536	1	8165	8165		29.15	1.0681	1	946850	+		42342	25780	28283	28296	48053	48053					0.03121221962896925
PPHPLPPRLTI	11	Unmodified	_PPHPLPPRLTI_					0	0	0		ENSG00000047410|ENST00000367478|TPR	ENSG00000047410|ENST00000367478|TPR	ENSG00000047410|ENST00000367478|TPR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.3716430664062	2	619.374415	1236.73428	-0.10661	-6.6034E-05	-3.8471	-0.0023828	-3.9537	-0.0024488	619.3719649656875	101.89	1.4654	101.89	101.45	102.91	0					98	36	4	0	0	0	0.75164	1	10425	10425		21.686	4.2177	1	1989800			42343	960	28284	28297	48054	48054					0.12537948456406411
PPHPPPTL	8	Unmodified	_PPHPPPTL_					0	0	0			REV__ENST00000333751.4_1_17:7255914-7256001:+|nuORF	REV__ENST00000333751.4_1_17:7255914-7256001:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3028564453125	2	428.239796	854.465038	0.068556	2.9358E-05	1.6903	0.00072385	1.7588	0.00075321	428.24078741386705	78.985	3.5592	79.396	77.9	81.459	0.4106					128	84	3	0	0	0	0.4196	1	9216	9216		21.702	0	1	407980	+		42344	25149	28285	28298	48055	48055					0.03198434559908492
PPHSSAPDRLE	11	Unmodified	_PPHSSAPDRLE_					0	0	0		nc|ENSG00000178222|Q495C1-3|RNF212;nc|ENSG00000178222|Q495C1-5|RNF212;ENSG00000178222|ENST00000433731|RNF212	nc|ENSG00000178222|Q495C1-3|RNF212	nc|ENSG00000178222|Q495C1-3|RNF212	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	603.8018188476562	2	603.299101	1204.58365	-0.24881	-0.0001501	1.6976	0.0010242	1.4488	0.00087405	603.2997326697555	31.82	0.89029	31.831	31.157	32.048	0.0109					24	20	2	0	0	0	0.7144	1	1750	1750		29.17	1.2878	1	52226			42345	7194	28286	28299	48056	48056					-0.010458629930781171
PPIAQDLVTCV	11	Unmodified	_PPIAQDLVTCV_					0	0	0			REV__ENSG00000155760|ENST00000286201|FZD7	REV__ENSG00000155760|ENST00000286201|FZD7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	578.8121948242188	2	578.307549	1154.60055	0.87917	0.00050843	4.4128	0.0025519	5.292	0.0030604	578.3098591180509	110.17	1.6008	110.24	110.06	111.66	0.073685					154	53	3	0	0	0	0.73893	1	11915	11915		24.519	0.31644	1	2193800	+		42346	20444	28287	28300	48057	48057					0.02942921568546808
PPIHLKFLLKL	11	Unmodified	_PPIHLKFLLKL_					0	0	0			REV__ENSG00000133138|ENST00000357242|TBC1D8B	REV__ENSG00000133138|ENST00000357242|TBC1D8B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.29193115234375	3	440.291831	1317.85366	-0.80694	-0.00035529	1.916	0.00084358	1.109	0.00048829	440.2925892319023	59.813	1.0781	59.814	59.336	60.414	0.00051117					87	33	3	0	0	0	0.78085	1	5155	5155		15.333	1.8252	1	264470	+		42347	19064	28288	28301	48058	48058					0.20745142081113954
PPIIGITT	8	Unmodified	_PPIIGITT_					0	0	0		nc|ENSG00000078124|Q9NUN7-2|ACER3;ENSG00000078124|ENST00000532485|ACER3	nc|ENSG00000078124|Q9NUN7-2|ACER3	nc|ENSG00000078124|Q9NUN7-2|ACER3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2482604980469	2	406.249829	810.485105	-1.1354	-0.00046124	-1.5216	-0.00061817	-2.657	-0.0010794	406.24912053143106	91.114	2.1144	91.114	90.563	92.677	0					101	49	3	0	0	0	0.81548	1	8866	8866		20.482	0	1	849560			42348	1391	28289	28302	48059	48059					0.07228185499832307
PPIIVAQCV	9	Unmodified	_PPIIVAQCV_					0	0	0			REV__ENST00000369936.2_1_1:109730792-109745631:+|nuORF	REV__ENST00000369936.2_1_1:109730792-109745631:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.2720947265625	2	470.270238	938.525924	0.69739	0.00032796	3.3815	0.0015902	4.0789	0.0019182	470.2717761018985	92.152	2.8924	92.309	91.308	94.201	0.15649					149	68	4	0	0	0	0.72402	1	9309	9309		38.806	5.9937	1	1938200	+		42349	18196	28290	28303	48060	48060					0.05420203547816982
PPIKIPFCPPL	11	Unmodified	_PPIKIPFCPPL_					0	0	0			REV__ENSG00000121053|ENST00000225371|EPX	REV__ENSG00000121053|ENST00000225371|EPX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3544921875	2	611.356845	1220.69914	1.1383	0.00069592	-2.6115	-0.0015966	-1.4732	-0.00090066	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.66312	2	9410	9410;9468		37.159	1.422	1	7316900	+		42350	18442	28291	28304	48061;48062	48061					0.09761569604256692
PPIKQKLH	8	Unmodified	_PPIKQKLH_					0	0	0			REV__nc|ENSG00000163946|Q9UK61-3|TASOR	REV__nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.80078125	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.88915	1	9523	9523		35.201	8.4046	1	7439400	+		42351	21001	28292	28305	48063	48063					0.1102236078503438
PPIKQKLH	8	Unmodified	_PPIKQKLH_					0	0	0			REV__nc|ENSG00000163946|Q9UK61-3|TASOR	REV__nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.8005676269531	2	480.803094	959.591636	-0.79097	-0.0003803	-4.038	-0.0019415	-4.829	-0.0023218	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.88915	1	9742	9742		35.201	3.2459	1	18644000	+		42352	21001	28292	28305	48064	48064					0.1102236078503438
PPIKQKLH	8	Unmodified	_PPIKQKLH_					0	0	0			REV__nc|ENSG00000163946|Q9UK61-3|TASOR	REV__nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.80078125	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.86288	1	9722	9722		26.796	0	1	17379000	+		42353	21001	28292	28305	48065	48065					0.1102236078503438
PPIKQKLH	8	Unmodified	_PPIKQKLH_					0	0	0			REV__nc|ENSG00000163946|Q9UK61-3|TASOR	REV__nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.8011779785156	2	480.803094	959.591636	-0.2736	-0.00013155	-3.9156	-0.0018826	-4.1892	-0.0020142	480.80110367170755	95.033	3.9341	95.453	94.933	98.867	0.41964					263	95	5	0	0	0	0.90465	1	11414	11414		40.573	3.4135	1	9403500	+		42354	21001	28292	28305	48066	48066					0.1102236078503438
PPIKQSARRGV	11	Unmodified	_PPIKQSARRGV_					0	0	0			REV__ENSG00000149256|ENST00000278550|TENM4	REV__ENSG00000149256|ENST00000278550|TENM4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8659057617188	2	604.864746	1207.71494	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.61	1	118.58	118.08	119.08	-0.024208								0	0	0	0.56276	1	13140	13140		19.997	0.6368	1		+		42355	20156	28293	28306	48067	48067					0.11938992165482887
PPILGQAILQG	11	Unmodified	_PPILGQAILQG_					0	0	0			REV__ENST00000590278.1_1_19:33696051-33698478:+|nuORF;REV__ENST00000518375.1_1_8:105502903-105507508:-|nuORF	REV__ENST00000518375.1_1_8:105502903-105507508:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.83056640625	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.72228	1	10665	10665		27.882	3.6795	1	5911200	+		42356	18918;20082	28294	28307	48068	48068					0.10094577919812764
PPILPLHTGT	10	Unmodified	_PPILPLHTGT_					0	0	0			REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3037719726562	2	523.305667	1044.59678	-0.83281	-0.00043582	-3.2133	-0.0016815	-4.0461	-0.0021173	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.71042	1	8358	8358		44.117	6.9577	1	2778600	+		42357	24097	28295	28308	48069	48069					0.0762661985700106
PPILPLHTGT	10	Unmodified	_PPILPLHTGT_					0	0	0			REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3038330078125	2	523.305667	1044.59678	-0.79828	-0.00041774	-3.1608	-0.0016541	-3.9591	-0.0020718	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.84112	4	8853	8478;8766;8840;8853		37.159	2.9866	1	9288900	+		42358	24097	28295	28308	48070;48071;48072;48073	48073					0.0762661985700106
PPILPLHTGT	10	Unmodified	_PPILPLHTGT_					0	0	0			REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3032836914062	2	523.305667	1044.59678	-0.041393	-2.1661E-05	-4.0495	-0.0021191	-4.0909	-0.0021408	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.86718	1	8733	8733		27.882	0	1	3850300	+		42359	24097	28295	28308	48074	48074					0.0762661985700106
PPILPLHTGT	10	Unmodified	_PPILPLHTGT_					0	0	0			REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.305667	1044.59678	-1.4863	-0.0007778	-2.6443	-0.0013838	-4.1306	-0.0021616	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.8608	1	8487	8487		34.173	2.2177	1	3566700	+		42360	24097	28295	28308	48075	48075					0.0762661985700106
PPILPLHTGT	10	Unmodified	_PPILPLHTGT_					0	0	0			REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.303466796875	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.85934	2	8847	8847;9054		35.618	7.736	1	12189000	+		42361	24097	28295	28308	48076;48077	48076					0.0762661985700106
PPILPLHTGT	10	Unmodified	_PPILPLHTGT_					0	0	0			REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	REV__ENST00000421442.2_2_3:184090707-184093318:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3037109375	2	523.305667	1044.59678	-1.0823	-0.0005664	-2.8643	-0.0014989	-3.9466	-0.0020653	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.86589	1	10558	10558		29.15	2.4566	1	13160000	+		42362	24097	28295	28308	48078	48078					0.0762661985700106
PPIMTIQPQLK	11	Unmodified	_PPIMTIQPQLK_					0	0	0			REV__ENSG00000110321|ENST00000339995|EIF4G2	REV__ENSG00000110321|ENST00000339995|EIF4G2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3692016601562	2	633.367941	1264.72133	-0.087569	-5.5464E-05	2.0471	0.0012966	1.9596	0.0012411	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.70737	1	9850	9850		30.318	2.2362	1	7059800	+		42363	17807	28296	28309	48079	48079					0.09955749282016768
PPIPAHGK	8	Unmodified	_PPIPAHGK_					0	0	0		nc|ENSG00000184274|P59091|LINC00315	nc|ENSG00000184274|P59091|LINC00315	nc|ENSG00000184274|P59091|LINC00315	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.73883056640625	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.87276	1	2145	2145		29.842	3.0454	1	1364200			42364	15147	28297	28310	48080	48080					0.05025854279756459
PPIPFPCL	8	Unmodified	_PPIPFPCL_					0	0	0		ENSG00000188816|ENST00000339992|HMX2	ENSG00000188816|ENST00000339992|HMX2	ENSG00000188816|ENST00000339992|HMX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.24090576171875	2	442.24095	882.467346	-0.15416	-6.8174E-05	0.20271	8.9649E-05	0.048558	2.1474E-05	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.91333	1	7941	7941		43.626	15.744	1	1068200			42365	7962	28298	28311	48081	48081					0.021411469733379818
PPIPFPCL	8	Unmodified	_PPIPFPCL_					0	0	0		ENSG00000188816|ENST00000339992|HMX2	ENSG00000188816|ENST00000339992|HMX2	ENSG00000188816|ENST00000339992|HMX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2407531738281	2	442.24095	882.467346	0.39969	0.00017676	-0.37312	-0.00016501	0.026573	1.1751E-05	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.91333	1	8534	8534		43.626	1.2299	1	1238700			42366	7962	28298	28311	48082	48082					0.021411469733379818
PPIPFPCL	8	Unmodified	_PPIPFPCL_					0	0	0		ENSG00000188816|ENST00000339992|HMX2	ENSG00000188816|ENST00000339992|HMX2	ENSG00000188816|ENST00000339992|HMX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24078369140625	2	442.24095	882.467346	0.56789	0.00025114	-0.64039	-0.0002832	-0.0725	-3.2062E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.88393	1	7792	7792		33.493	0.68056	1	1094000			42367	7962	28298	28311	48083	48083					0.021411469733379818
PPIPFPCL	8	Unmodified	_PPIPFPCL_					0	0	0		ENSG00000188816|ENST00000339992|HMX2	ENSG00000188816|ENST00000339992|HMX2	ENSG00000188816|ENST00000339992|HMX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2410583496094	2	442.24095	882.467346	-0.73522	-0.00032514	0.50753	0.00022445	-0.22769	-0.00010069	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.88393	1	9352	9352		33.493	2.9893	1	866900			42368	7962	28298	28311	48084	48084					0.021411469733379818
PPIQKVHVYL	10	Unmodified	_PPIQKVHVYL_					0	0	0			REV__ENST00000263409.8_1_5:38481315-38481444:-|nuORF	REV__ENST00000263409.8_1_5:38481315-38481444:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.8565673828125	2	597.355691	1192.69683	1.5032	0.00089792	-0.8644	-0.00051635	0.63877	0.00038157	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.86452	1	11059	11059		30.504	0.18592	1	1501500	+		42369	24449	28299	28312	48085	48085					0.10818857190815834
PPIVHLPEN	9	Unmodified	_PPIVHLPEN_					0	0	0		ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08|DNAH12;nc|ENSG00000174844|Q6ZR08-4|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.27984619140625	2	508.282192	1014.54983	0.22565	0.0001147	-4.0704	-0.0020689	-3.8448	-0.0019542	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.78058	1	9007	9007		30.504	0	1	1820400			42370	6969	28300	28313	48086	48086					0.04313760305853975
PPIVLETK	8	Unmodified	_PPIVLETK_					0	0	0		ENSG00000135324|ENST00000257776|MRAP2	ENSG00000135324|ENST00000257776|MRAP2	ENSG00000135324|ENST00000257776|MRAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.7710266113281	2	448.776211	895.537869	-1.3729	-0.00061613	2.498	0.001121	1.125	0.00050489	448.77718996036316	41.146	1.1035	41.15	40.845	41.948	0.0043983					56	33	2	0	0	0	0.80706	1	2656	2656		19.36	1.0356	1	242730			42371	4005	28301	28314	48087	48087					0.08592143562680121
PPIVTDEL	8	Unmodified	_PPIVTDEL_					0	0	0		nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;nc|ENSG00000061987|Q7Z3U7-5|MON2;ENSG00000061987|ENST00000393630|MON2;nc|ENSG00000061987|Q7Z3U7-3|MON2;ENST00000551307.5_1_12:62954224-62986526:+|nuORF	nc|ENSG00000061987|Q7Z3U7-2|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2415771484375	2	442.242201	882.469849	-0.15416	-6.8174E-05	-2.6265	-0.0011616	-2.7807	-0.0012297	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.86288	1	7681	7681		26.796	3.7536	1	1068200			42372	1080	28302	28315	48088	48088					0.023912739119850812
PPIWPSVPIS	10	Unmodified	_PPIWPSVPIS_					0	0	0		ENSG00000117036|ENST00000368192|ETV3	ENSG00000117036|ENST00000368192|ETV3	ENSG00000117036|ENST00000368192|ETV3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.839599609375	2	546.808042	1091.60153	0.84841	0.00046392	-1.6701	-0.00091321	-0.82167	-0.0004493	547.306991658239	101.1	0.44065	101.25	100.93	101.37	0.14352					16	10	2	0	0	0	0.37624	1	10578	10578		35.618	0	1	129540			42373	2962	28303	28316	48089	48089					0.059395039997752974
PPKCKALI	8	Unmodified	_PPKCKALI_					0	0	0			REV__ENST00000456760.1_1_9:125449379-125449940:+|nuORF	REV__ENST00000456760.1_1_9:125449379-125449940:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2513732910156	2	435.267499	868.520445	-1.5646	-0.00068103	2.7712	0.0012062	1.2066	0.0005252	435.26933968093863	78.792	0.20834	78.919	78.816	79.024	0.12695					7	5	2	0	0	0	0.4196	1	7454	7454		20.482	0	1	20388	+		42374	26960	28304	28317	48090	48090					0.0809252475600033
PPKEGTQL	8	Unmodified	_PPKEGTQL_					0	0	0		nc|ENSG00000005469|Q9UKG9-3|CROT;ENSG00000005469|ENST00000331536|CROT;ENST00000488850.1_1_7:86990759-86998828:+|nuORF	nc|ENSG00000005469|Q9UKG9-3|CROT	nc|ENSG00000005469|Q9UKG9-3|CROT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2390441894531	2	435.239993	868.465432	0.082196	3.5775E-05	0.37718	0.00016417	0.45938	0.00019994	435.23995767392597	28.245	0.56056	28.356	28.067	28.627	0.11117					54	29	2	0	0	0	0.91472	1	1153	1153		44.117	1.6423	1	145700			42375	684	28305	28318	48091	48091					0.025938094890989305
PPKFVHWLP	9	Unmodified	_PPKFVHWLP_					0	0	0			REV__ENSG00000067900|ENST00000399799|ROCK1	REV__ENSG00000067900|ENST00000399799|ROCK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8198852539062	2	560.818744	1119.62294	-0.54677	-0.00030664	2.4066	0.0013497	1.8598	0.001043	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.7932	1	9069	9069		25.45	0.93098	1	408930	+		42376	16549	28306	28319	48092	48092					0.06790933819138445
PPKGSAGRGG	10	Unmodified	_PPKGSAGRGG_					0	0	0		ENST00000487114.1_1_1:36644865-36645084:+|nuORF	ENST00000487114.1_1_1:36644865-36645084:+|nuORF	ENST00000487114.1_1_1:36644865-36645084:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.24078369140625	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.82886	1	8197	8197		37.812	3.639	1	1238700			42377	12596	28307	28320	48093	48093					0.021228632977113193
PPKGSAGRGG	10	Unmodified	_PPKGSAGRGG_					0	0	0		ENST00000487114.1_1_1:36644865-36645084:+|nuORF	ENST00000487114.1_1_1:36644865-36645084:+|nuORF	ENST00000487114.1_1_1:36644865-36645084:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2411804199219	2	442.240858	882.467164	1.1524	0.00050963	-0.96747	-0.00042785	0.18491	8.1777E-05	442.24031897086877	78.91	2.9149	78.962	77.3	80.215	0.051682					176	101	2	0	0	0	0.86218	1	7735	7735		32.812	2.3088	1	354610			42378	12596	28307	28320	48094	48094					0.021228632977113193
PPKIRSLQIR	10	Unmodified	_PPKIRSLQIR_					0	0	0			REV__ENSG00000171456|ENST00000375687|ASXL1	REV__ENSG00000171456|ENST00000375687|ASXL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3665771484375	2	604.385314	1206.75608	1.0449	0.00063154	-1.7435	-0.0010537	-0.69855	-0.0004222	604.383497623617	104.89	0.40918	105.05	104.88	105.29	0.16457					11	9	2	0	0	0	0.37624	1	11179	11179		19.104	10.41	1	143440	+		42379	21731	28308	28321	48095	48095					0.1609675320498809
PPKKFRDCL	9	Unmodified	_PPKKFRDCL_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2;nc|ENSG00000123104|Q14571-2|ITPR2;ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1;ENST00000467056.5_1_3:4536161-4687445:+|nuORF	ENSG00000123104|ENST00000381340|ITPR2;ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3065795898438	2	552.305144	1102.59573	-0.5921	-0.00032702	3.0593	0.0016897	2.4672	0.0013627	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.77244	1	9116	9116		32.812	1.2826	1	1102700			42380	5087;1741;3260	28309	28322	48096	48096					0.04854082216434108
PPKKFRDCL	9	Unmodified	_PPKKFRDCL_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2;nc|ENSG00000123104|Q14571-2|ITPR2;ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1;ENST00000467056.5_1_3:4536161-4687445:+|nuORF	ENSG00000123104|ENST00000381340|ITPR2;ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3060913085938	2	552.305144	1102.59573	-0.70613	-0.00039	2.9981	0.0016558	2.2919	0.0012658	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.74721	1	9732	9732		37.159	2.9866	1	1609500			42381	5087;1741;3260	28309	28322	48097	48097					0.04854082216434108
PPKKFRDCL	9	Unmodified	_PPKKFRDCL_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2;nc|ENSG00000123104|Q14571-2|ITPR2;ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1;ENST00000467056.5_1_3:4536161-4687445:+|nuORF	ENSG00000123104|ENST00000381340|ITPR2;ENSG00000096433|ENST00000605930|ITPR3;nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.3070678710938	2	552.305144	1102.59573	0.7768	0.00042903	1.633	0.00090193	2.4098	0.001331	552.3060097260034	92.551	2.2776	92.998	91.922	94.2	0.44661					137	53	3	0	0	0	0.7932	1	10917	10917		26.693	0	1	579750			42382	5087;1741;3260	28309	28322	48098	48098					0.04854082216434108
PPKKKLERDL	10	Unmodified	_PPKKKLERDL_					0	0	0			REV__ENSG00000076201|ENST00000265562|PTPN23	REV__ENSG00000076201|ENST00000265562|PTPN23	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	409.29205322265625	3	408.587195	1222.73976	1.7961	0.00073386	2.9622	0.0012103	4.7582	0.0019442	408.58825954121335	67.599	0.31683	67.629	67.426	67.743	0.030571					13	9	2	0	0	0	0.37624	1	6409	6409		25.126	12.169	1	26163	+		42383	16723	28310	28323	48099	48099					0.1372962724824447
PPKKKPKTTNI	11	Unmodified	_PPKKKPKTTNI_					0	0	0		nc|ENSG00000117222|Q15291-2|RBBP5;ENSG00000117222|ENST00000264515|RBBP5	nc|ENSG00000117222|Q15291-2|RBBP5	nc|ENSG00000117222|Q15291-2|RBBP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3921508789062	2	626.392805	1250.77106	6.5284	0.0040894	-0.081087	-5.0792E-05	6.4474	0.0040386	626.3926332605848	110.43	0.80482	110.5	110.23	111.04	0.068001					53	30	2	0	0	0	0.76322	1	13418	13418		19.104	1.6355	1	332460			42384	2967	28311	28324	48100	48100					0.15570200282331825
PPKKLAPPL	9	Unmodified	_PPKKLAPPL_					0	0	0			REV__ENST00000456608.1_1_13:20137971-20138526:-|nuORF	REV__ENST00000456608.1_1_13:20137971-20138526:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.80078125	2	480.81567	959.616788	-1.6774	-0.00080653	-0.084701	-4.0726E-05	-1.7621	-0.00084725	480.81498229094825	95.165	0.65405	95.367	95.069	95.723	0.20242					19	15	2	0	0	0	0.20789	1	9722	9722		40.573	13.88	1	174310	+		42385	26958	28312	28325	48101	48101					0.1353641558758909
PPKKLLSRNW	10	Unmodified	_PPKKLLSRNW_					0	0	0			REV__ENST00000466767.1_1_1:160518048-160520985:-|nuORF	REV__ENST00000466767.1_1_1:160518048-160520985:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8690795898438	2	619.87204	1237.72953	-0.2143	-0.00013284	-4.1033	-0.0025435	-4.3176	-0.0026764	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.86272	1	9261	9261		24.519	0.99649	1	1169100	+		42386	27137	28313	28326	48102	48102					0.1201706431365892
PPKKLPLVI	9	Unmodified	_PPKKLPLVI_					0	0	0			REV__nc|ENSG00000138674|O94979-5|SEC31A	REV__nc|ENSG00000138674|O94979-5|SEC31A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.8138122558594	2	502.846971	1003.67939	-0.061796	-3.1074E-05	-0.83028	-0.0004175	-0.89208	-0.00044858	502.84666552919015	97.438	0.21172	97.494	97.337	97.548	0.056839					7	4	2	0	0	0	0.20789	1	10263	10263		18.324	3.6603	1	49781	+		42387	19493	28314	28327	48103	48103					0.17769561655791222
PPKLRIPNVF	10	Unmodified	_PPKLRIPNVF_					0	0	0		ENSG00000152527|ENST00000282406|PLEKHH2;ENST00000405223.6_1_2:43871812-43968195:+|nuORF;nc|ENSG00000152527|Q8IVE3-3|PLEKHH2	ENSG00000152527|ENST00000282406|PLEKHH2	ENSG00000152527|ENST00000282406|PLEKHH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8662719726562	2	590.863683	1179.71281	3.2055	0.001894	2.0239	0.0011959	5.2294	0.0030899	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.86452	1	12665	12665		30.504	0.18592	1	6398400			42388	5181	28315	28328	48104	48104					0.13014563427691428
PPKMEITSL	9	Unmodified	_PPKMEITSL_					0	0	0			REV__ENST00000442109.2_1_9:88550518-88550698:+|nuORF	REV__ENST00000442109.2_1_9:88550518-88550698:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.27996826171875	2	508.27826	1014.54197	1.4316	0.00072764	2.4304	0.0012353	3.862	0.001963	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.76764	1	9197	9197		34.173	4.331	1	1903500	+		42389	26766	28316	28329	48105	48105					0.03527864994077845
PPKRLSGLVVW	11	Unmodified	_PPKRLSGLVVW_					0	0	0			REV__ENST00000328914.4_1_7:4803200-4803701:+|nuORF	REV__ENST00000328914.4_1_7:4803200-4803701:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.9224548339844	3	417.923919	1250.74993	-0.96194	-0.00040202	-2.9028	-0.0012132	-3.8648	-0.0016152	417.922646807868	105.95	2.4445	105.95	105.29	107.73	0					194	56	4	0	0	0	0.75495	1	10929	10929		18.531	0	1	9358100	+		42390	25099	28317	28330	48106	48106					0.1345823497345009
PPKRPVLLQC	10	Unmodified	_PPKRPVLLQC_					0	0	0			REV__ENST00000372242.7_1_1:45101583-45102057:-|nuORF	REV__ENST00000372242.7_1_1:45101583-45102057:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8431396484375	2	575.841894	1149.66923	0.91496	0.00052687	0.96246	0.00055422	1.8774	0.0010811	575.8423131361362	90.432	2.8004	90.479	88.667	91.467	0.046448					215	66	4	0	0	0	0.85934	1	9416	9416		35.618	6.4482	1	2025300	+		42391	25711	28318	28331	48107	48107					0.10038630658937109
PPKRRGGG	8	Unmodified	_PPKRRGGG_					0	0	0		ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-2|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7461853027344	2	412.746111	823.477669	-0.18726	-7.729E-05	0.65894	0.00027198	0.47169	0.00019469	412.74629807731793	85.159	3.9764	85.226	83.424	87.4	0.067261					139	91	3	0	0	0	0.82464	1	8507	8507		21.702	1.2205	1	1290300			42392	4579	28319	28332	48108	48108					0.05886890742817741
PPKRRGGG	8	Unmodified	_PPKRRGGG_					0	0	0		ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-2|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.74615478515625	2	412.746111	823.477669	0.7641	0.00031538	-0.086078	-3.5528E-05	0.67802	0.00027985	412.7458735732829	85.139	3.1869	85.067	83.891	87.078	-0.07196					136	73	4	0	0	0	0.86791	1	8722	8722		28.254	6.5519	1	1556000			42393	4579	28319	28332	48109	48109					0.05886890742817741
PPKRRGGG	8	Unmodified	_PPKRRGGG_					0	0	0		ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-2|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7463684082031	2	412.746111	823.477669	2.8762	0.0011871	-2.3909	-0.00098683	0.4853	0.00020031	412.7450091002515	84.946	2.9822	85.005	83.717	86.699	0.05925					127	68	4	0	0	0	0.81548	5	8628	8571;8581;8605;8617;8628		28.254	8.8943	1	1583700			42394	4579	28319	28332	48110;48111;48112;48113;48114	48114					0.05886890742817741
PPKRRGGG	8	Unmodified	_PPKRRGGG_					0	0	0		ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-2|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7462158203125	2	412.746111	823.477669	-1.8202	-0.00075129	2.4165	0.0009974	0.59627	0.00024611	412.7469769415949	84.864	3.004	85.04	83.072	86.076	0.17561					129	69	4	0	0	0	0.884	1	8290	8290		33.516	8.0654	1	1518200			42395	4579	28319	28332	48115	48115					0.05886890742817741
PPKRRGGG	8	Unmodified	_PPKRRGGG_					0	0	0		ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-2|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7460632324219	2	412.746111	823.477669	0.59258	0.00024459	0.14054	5.8006E-05	0.73312	0.00030259	412.7459816855853	84.982	2.6893	85.131	84.474	87.163	0.14857					120	62	4	0	0	0	0.82464	2	8267	8267;8314		21.702	2.3424	1	1216600			42396	4579	28319	28332	48116;48117	48116					0.05886890742817741
PPKRRGGG	8	Unmodified	_PPKRRGGG_					0	0	0		ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-2|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7465515136719	2	412.746111	823.477669	-0.25099	-0.00010359	0.81368	0.00033585	0.5627	0.00023225	412.7462313332881	84.857	1.7729	85.304	84.713	86.486	0.44736					79	43	4	0	0	0	0.86791	1	9931	9931		28.254	1.4582	1	1009400			42397	4579	28319	28332	48118	48118					0.05886890742817741
PPKSICVSP	9	Unmodified	_PPKSICVSP_					0	0	0		ENST00000416860.2_2_1:2487653-2488061:-|nuORF	ENST00000416860.2_2_1:2487653-2488061:-|nuORF	ENST00000416860.2_2_1:2487653-2488061:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2533264160156	2	464.252046	926.489538	0.59461	0.00027605	3.4545	0.0016038	4.0491	0.0018798	464.25355465849185	81.523	3.0273	81.667	79.894	82.921	0.14352					163	84	3	0	0	0	0.58668	1	7713	7713		47.657	14.164	1	434730			42398	11404	28320	28333	48119	48119					0.02335326651120795
PPKSVHSK	8	Unmodified	_PPKSVHSK_					0	0	0			REV__ENSG00000111962|ENST00000367463|UST	REV__ENSG00000111962|ENST00000367463|UST	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2552490234375	2	440.255977	878.497401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.594	1	60.562	60.062	61.062	-0.032509								0	0	0	0.29871	1	5725	5725		23.042	3.6825	1		+		42399	17908	28321	28334	48120	48120					0.05329221962904285
PPKVPRLQPLP	11	Unmodified	_PPKVPRLQPLP_					0	0	0		ENST00000504880.5_1_5:54992856-54993786:-|nuORF	ENST00000504880.5_1_5:54992856-54993786:-|nuORF	ENST00000504880.5_1_5:54992856-54993786:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3938598632812	2	621.390065	1240.76558	-0.078753	-4.8936E-05	4.3785	0.0027208	4.2997	0.0026718	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.72918	1	11087	11087		26.693	11.051	1	10411000			42400	12914	28322	28335	48121	48121					0.1548252149052587
PPKVRLLQSLT	11	Unmodified	_PPKVRLLQSLT_					0	0	0			REV__ENST00000476918.1_1_3:193854169-193854699:+|nuORF	REV__ENST00000476918.1_1_3:193854169-193854699:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.391357421875	2	626.392805	1250.77106	2.3084	0.0014459	4.3102	0.0026999	6.6186	0.0041458	626.3953217408156	109.92	1.4097	109.98	109.55	110.95	0.06794					99	57	2	0	0	0	0.7342	1	13383	13383		25.574	2.5316	1	615360	+		42401	27344	28323	28336	48122	48122					0.15570200282331825
PPKVRLLQSLT	11	Unmodified	_PPKVRLLQSLT_					0	0	0			REV__ENST00000476918.1_1_3:193854169-193854699:+|nuORF	REV__ENST00000476918.1_1_3:193854169-193854699:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3930053710938	2	626.392805	1250.77106	6.325	0.0039619	-0.13149	-8.2365E-05	6.1935	0.0038796	626.3925398868604	109.87	0.514	109.94	109.72	110.23	0.068001					34	23	3	0	0	0	0.78658	1	13349	13349		14.137	0	1	960900	+		42402	27344	28323	28336	48123	48123					0.15570200282331825
PPKVRLLQSLT	11	Unmodified	_PPKVRLLQSLT_					0	0	0			REV__ENST00000476918.1_1_3:193854169-193854699:+|nuORF	REV__ENST00000476918.1_1_3:193854169-193854699:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3912353515625	2	626.392805	1250.77106	6.5284	0.0040894	-0.081087	-5.0792E-05	6.4474	0.0040386	626.3926332605848	110.43	0.80482	110.5	110.23	111.04	0.068001					53	30	2	0	0	0	0.7434	1	13426	13426		23.523	1.5628	1	332460	+		42403	27344	28323	28336	48124	48124					0.15570200282331825
PPLACLRRPSR	11	Unmodified	_PPLACLRRPSR_					0	0	0		ENST00000269499.9_2_18:60190376-60190661:+|nuORF	ENST00000269499.9_2_18:60190376-60190661:+|nuORF	ENST00000269499.9_2_18:60190376-60190661:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.58203125	3	422.580158	1264.71864	2.2204	0.0009383	2.1029	0.00088864	4.3233	0.0018269	422.58094622121547	97.769	3.2395	97.714	96.802	100.04	-0.055542					208	75	4	0	0	0	0.67762	1	10590	10590		35.178	4.6094	1	525770			42404	9548	28324	28337	48125	48125					0.096873386677089
PPLAQSQRLAI	11	Unmodified	_PPLAQSQRLAI_					0	0	0			REV__nc|ENSG00000182979|Q13330-3|MTA1	REV__nc|ENSG00000182979|Q13330-3|MTA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8562622070312	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.69995	1	9479	9479		31.53	0	1	18777000	+		42405	22564	28325	28338	48126	48126					0.10416767697097384
PPLCSLTLTA	10	Unmodified	_PPLCSLTLTA_					0	0	0		ENST00000542466.2_1_12:58120972-58121218:+|nuORF	ENST00000542466.2_1_12:58120972-58121218:+|nuORF	ENST00000542466.2_1_12:58120972-58121218:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.2800598144531	2	508.27826	1014.54197	-0.39653	-0.00020155	4.0689	0.0020681	3.6724	0.0018666	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.8608	1	8844	8844		34.173	5.023	1	2080300			42406	13532	28326	28339	48127	48127					0.035278649940664764
PPLEELFV	8	Unmodified	_PPLEELFV_					0	0	0			REV__ENSG00000131183|ENST00000324417|SLC34A1	REV__ENSG00000131183|ENST00000324417|SLC34A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28778076171875	2	472.260394	942.506234	-0.10803	-5.1016E-05	-4.2951	-0.0020284	-4.4031	-0.0020794	472.2590467748452	95.411	0.65971	95.477	95.306	95.966	0.06591					29	15	3	0	0	0	0.4196	1	10047	10047		44.531	20.328	1	303140	+		42407	18938	28327	28340	48128	48128					0.03268150808708015
PPLEKLPHE	9	Unmodified	_PPLEKLPHE_					0	0	0		nc|ENSG00000104852|P08621-3|SNRNP70;nc|ENSG00000104852|P08621-2|SNRNP70;ENSG00000104852|ENST00000598441|SNRNP70	nc|ENSG00000104852|P08621-3|SNRNP70	nc|ENSG00000104852|P08621-3|SNRNP70	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2938232421875	2	530.295299	1058.57605	-1.2396	-0.00065735	-2.6354	-0.0013976	-3.875	-0.0020549	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.74721	1	10687	10687		37.159	1.5408	1	1818700			42408	2154	28328	28341	48129	48129					0.04910029477309763
PPLFRAGSL	9	Unmodified	_PPLFRAGSL_					0	0	0		ENSG00000274209|ENST00000620264|ANTXRL	ENSG00000274209|ENST00000620264|ANTXRL	ENSG00000274209|ENST00000620264|ANTXRL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2774353027344	2	479.279452	956.544351	-0.77651	-0.00037216	-3.5504	-0.0017016	-4.3269	-0.0020738	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.77244	1	8495	8495		32.812	0.85756	1	7040000			42409	8992	28329	28342	48130	48130					0.0643408151404401
PPLHPAPA	8	Unmodified	_PPLHPAPA_					0	0	0		ENSG00000240445|ENST00000395675|FOXO3B;nc|ENSG00000290687|P0CG31|ZNF286B	ENSG00000240445|ENST00000395675|FOXO3B	ENSG00000240445|ENST00000395675|FOXO3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2259521484375	2	400.226688	798.438824	-1.9102	-0.00076451	1.063	0.00042543	-0.84722	-0.00033908	400.22704294896187	35.523	1.8215	35.554	35.255	37.076	0.031132					88	51	2	0	0	0	0.84567	2	1870	1870;1881		33.493	2.8017	1	333970			42410	8778	28330	28343	48131;48132	48131					0.031541653884119114
PPLHPGAH	8	Unmodified	_PPLHPGAH_					0	0	0		ENST00000306801.7_1_17:78939591-78939999:+|nuORF;ENST00000325239.11_1_10:50030485-50034720:+|nuORF;ENST00000374161.7_3_10:50030485-50031246:+|nuORF	ENST00000306801.7_1_17:78939591-78939999:+|nuORF	ENST00000306801.7_1_17:78939591-78939999:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1939697265625	2	413.221937	824.429321	-0.039864	-1.6472E-05	0.40807	0.00016863	0.36821	0.00015215	413.2213463654109	84.071	0.20249	84.527	84.441	84.644	0.45555					6	4	2	0	0	0	0.4196	1	9811	9811		10.185	0	1	70808			42411	9864	28331	28344	48133	48133					0.010083971028961969
PPLISQRQRI	10	Unmodified	_PPLISQRQRI_					0	0	0			REV__ENST00000526909.5_1_11:710402-726978:+|nuORF	REV__ENST00000526909.5_1_11:710402-726978:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3660888671875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.86718	1	12622	12622		27.882	2.3082	1	3346600	+		42412	22180	28332	28345	48134	48134					0.12459876308275852
PPLKKKCERL	10	Unmodified	_PPLKKKCERL_					0	0	0		ENST00000282488.11_1_3:151986849-152017245:+|nuORF	ENST00000282488.11_1_3:151986849-152017245:+|nuORF	ENST00000282488.11_1_3:151986849-152017245:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.3699340820312	2	606.368275	1210.722	-0.02762	-1.6748E-05	2.1046	0.0012762	2.077	0.0012594	606.3694476526515	94.093	3.5324	94.139	93.078	96.61	0.045456					200	83	3	0	0	0	0.85694	1	9980	9980		21.96	2.5999	1	863170			42413	9635	28333	28346	48135	48135					0.12506588721726075
PPLKKLKSLND	11	Unmodified	_PPLKKLKSLND_					0	0	0		nc|ENSG00000176049|Q96AA8-4|JAKMIP2;nc|ENSG00000176049|Q96AA8-2|JAKMIP2;nc|ENSG00000176049|Q96AA8|JAKMIP2;ENSG00000176049|ENST00000616793|JAKMIP2	nc|ENSG00000176049|Q96AA8-4|JAKMIP2	nc|ENSG00000176049|Q96AA8-4|JAKMIP2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.8916625976562	2	626.884813	1251.75507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.21	1	110.28	109.78	110.78	0.068001								0	0	0	0.56276	1	13380	13380		28.081	13.944	1				42414	7052	28334	28347	48136	48136					0.13926494045426807
PPLKLLKGSVE	11	Unmodified	_PPLKLLKGSVE_					0	0	0		nc|ENSG00000124782|Q92766-5|RREB1;nc|ENSG00000124782|Q92766-3|RREB1;nc|ENSG00000124782|Q92766|RREB1;ENSG00000124782|ENST00000379938|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	nc|ENSG00000124782|Q92766-5|RREB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8670654296875	2	590.868631	1179.72271	-1.319	-0.00077937	-2.4341	-0.0014383	-3.7532	-0.0022176	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.7144	1	11055	11055		29.17	7.2102	1	81379000			42415	3359	28335	28348	48137	48137					0.14003706642415636
PPLKVLSN	8	Unmodified	_PPLKVLSN_					0	0	0			REV__ENST00000594708.1_1_9:72873172-72873439:-|nuORF	REV__ENST00000594708.1_1_9:72873172-72873439:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.251953125	2	434.268553	866.522553	-1.5841	-0.00068792	4.3181	0.0018752	2.7341	0.0011873	434.2703781647657	78.18	0.58545	78.307	78.021	78.606	0.12695					29	18	2	0	0	0	0.4196	1	7373	7373		17.365	4.4058	1	72177	+		42416	29238	28336	28349	48138	48138					0.08395276765463677
PPLLHREL	8	Unmodified	_PPLLHREL_					0	0	0		ENST00000505731.5_1_4:2937416-2940466:+|nuORF	ENST00000505731.5_1_4:2937416-2940466:+|nuORF	ENST00000505731.5_1_4:2937416-2940466:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7909240722656	2	487.792727	973.5709	-0.71211	-0.00034736	-3.8761	-0.0018908	-4.5883	-0.0022381	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.9295	1	7818	7818		55.504	7.5886	1	678280			42417	12929	28337	28350	48139	48139					0.08305770405377189
PPLLIPLHPH	10	Unmodified	_PPLLIPLHPH_					0	0	0			REV__nc|ENSG00000144712|O75155-2|CAND2	REV__nc|ENSG00000144712|O75155-2|CAND2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.32958984375	2	567.345126	1132.6757	1.4942	0.00084771	2.4669	0.0013996	3.961	0.0022473	567.3462230260036	95.525	2.0696	95.572	94.413	96.483	0.046982					68	48	2	0	0	0	0.37624	1	9947	9947		35.201	14.254	1	107910	+		42418	19908	28338	28351	48140	48140					0.1146689188194614
PPLLKKELLI	10	Unmodified	_PPLLKKELLI_					0	0	0		ENST00000495008.5_1_3:108355483-108366962:+|nuORF;ENSG00000198919|ENST00000361582|DZIP3	ENST00000495008.5_1_3:108355483-108366962:+|nuORF	ENST00000495008.5_1_3:108355483-108366962:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3534545898438	2	582.391742	1162.76893	-0.28457	-0.00016573	-3.3134	-0.0019297	-3.5979	-0.0020954	582.3897387685487	103.9	0.27748	103.9	103.68	103.96	0					8	6	2	0	0	0	0.37624	1	10681	10681		9.7057	0	1	160420			42419	8369	28339	28352	48141	48141					0.19405771544506933
PPLLKKELLI	10	Unmodified	_PPLLKKELLI_					0	0	0		ENST00000495008.5_1_3:108355483-108366962:+|nuORF;ENSG00000198919|ENST00000361582|DZIP3	ENST00000495008.5_1_3:108355483-108366962:+|nuORF	ENST00000495008.5_1_3:108355483-108366962:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.353759765625	2	582.391742	1162.76893	0.15955	9.2919E-05	3.0483	0.0017753	3.2079	0.0018682	582.3925413973036	103.27	0.20158	103.31	103.19	103.4	0.041481					10	4	3	0	0	0	0.37624	1	11208	11208		13.454	1.943	1	125690			42420	8369	28339	28352	48142	48142					0.19405771544506933
PPLLLDAS	8	Unmodified	_PPLLLDAS_					0	0	0			REV__ENSG00000171467|ENST00000361428|ZNF318;REV__ENSG00000064999|ENST00000360359|ANKS1A	REV__ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2380065917969	2	413.239461	824.46437	-0.091267	-3.7715E-05	-2.9715	-0.001228	-3.0628	-0.0012657	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.884	1	8807	8807		33.516	3.0119	1	1247200	+		42421	21733;16488	28340	28353	48143	48143					0.045115951201864846
PPLLLGSAVLL	11	Unmodified	_PPLLLGSAVLL_					0	0	0		ENST00000371021.4_1_10:99080834-99081359:+|nuORF	ENST00000371021.4_1_10:99080834-99081359:+|nuORF	ENST00000371021.4_1_10:99080834-99081359:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.840087890625	2	546.854993	1091.69543	0.19583	0.00010709	2.758	0.0015082	2.9539	0.0016153	546.856410435685	100.8	0.51934	101.01	100.8	101.32	0.2058					31	12	3	0	0	0	0.1725	1	10549	10549		20.947	0	1	465180			42422	10656	28341	28354	48144	48144					0.15325223102036034
PPLLLLLALL	10	Unmodified	_PPLLLLLALL_					0	0	0		nc|ENSG00000163785|P34925-2|RYK;ENSG00000163785|ENST00000623711|RYK;ENSG00000167779|ENST00000301464|IGFBP6	nc|ENSG00000163785|P34925-2|RYK	nc|ENSG00000163785|P34925-2|RYK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3268432617188	2	538.378103	1074.74165	3.4079	0.0018347	-3.9348	-0.0021184	-0.52686	-0.00028365	538.3755758161966	100.99	0.45025	100.94	100.67	101.12	-0.052116					15	10	2	0	0	0	0.37624	1	10965	10965		7.6903	0	1	319540			42423	5862	28342	28355	48145	48145					0.2072728800412733
PPLLLLVF	8	Unmodified	_PPLLLLVF_					0	0	0		nc|ENSG00000274487|A6NEC2-3|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1;ENSG00000141279|ENST00000322157|NPEPPS	nc|ENSG00000274487|A6NEC2-3|NPEPPSL1	nc|ENSG00000274487|A6NEC2-3|NPEPPSL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3009948730469	2	456.301865	910.589176	-1.9609	-0.00089476	0.42413	0.00019353	-1.5368	-0.00070123	456.3019244318546	33.431	1.5568	33.431	33.135	34.692	0					145	44	4	0	0	0	0.80127	1	1825	1825		16.705	0	1	2313000			42424	4485	28343	28356	48146	48146					0.13030512327384258
PPLLLLVF	8	Unmodified	_PPLLLLVF_					0	0	0		nc|ENSG00000274487|A6NEC2-3|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1;ENSG00000141279|ENST00000322157|NPEPPS	nc|ENSG00000274487|A6NEC2-3|NPEPPSL1	nc|ENSG00000274487|A6NEC2-3|NPEPPSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3038330078125	2	456.301865	910.589176	0.63968	0.00029189	3.9109	0.0017846	4.5506	0.0020765	456.3036136363667	22.002	0.68279	21.944	21.689	22.372	-0.057201					33	27	2	0	0	0	0.85228	1	646	646		10.185	0.71421	1	18245			42425	4485	28343	28356	48147	48147					0.13030512327384258
PPLLLLVLV	9	Unmodified	_PPLLLLVLV_					0	0	0		nc|ENSG00000284797|A0A2R8Y7Y5|CIST1	nc|ENSG00000284797|A0A2R8Y7Y5|CIST1	nc|ENSG00000284797|A0A2R8Y7Y5|CIST1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	488.8394775390625	2	488.843897	975.67324	-0.71173	-0.00034792	-1.8314	-0.00089529	-2.5432	-0.0012432	488.84285329125026	74.539	0.52522	74.666	74.399	74.924	0.12711					27	16	2	0	0	0	0.7932	1	6904	6904		14.664	0	1	92753			42426	15326	28344	28357	48148	48148					0.18443043424281313
PPLLLPRCQP	10	Unmodified	_PPLLLPRCQP_					0	0	0			REV__ENST00000270792.9_1_1:26607610-26607769:+|nuORF	REV__ENST00000270792.9_1_1:26607610-26607769:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.32958984375	2	567.328619	1132.64269	0.77491	0.00043963	1.7436	0.00098922	2.5185	0.0014288	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.86452	1	8972	8972		30.504	5.9844	1	6344600	+		42427	24532	28345	28358	48149	48149					0.08166941767581193
PPLLLPRCQP	10	Unmodified	_PPLLLPRCQP_					0	0	0			REV__ENST00000270792.9_1_1:26607610-26607769:+|nuORF	REV__ENST00000270792.9_1_1:26607610-26607769:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3294067382812	2	567.328619	1132.64269	-1.3957	-0.00079181	3.4589	0.0019623	2.0632	0.0011705	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.84112	1	9513	9513		37.159	0.71236	1	17338000	+		42428	24532	28345	28358	48150	48150					0.08166941767581193
PPLLMLVF	8	Unmodified	_PPLLMLVF_					0	0	0		chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.27972412109375	2	465.280075	928.545597	-0.11899	-5.5362E-05	0.0018671	8.6873E-07	-0.11712	-5.4493E-05	465.2799248826243	89.079	2.3276	89.147	88.595	90.922	0.068161					120	54	4	0	0	0	0.88393	1	9077	9077		33.493	1.5381	1	1620100			42429	429	28346	28359	48151	48151					0.07846579558577105
PPLLMLVF	8	Unmodified	_PPLLMLVF_					0	0	0		chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.2799072265625	2	465.280075	928.545597	1.2805	0.00059581	-1.4069	-0.00065462	-0.12639	-5.8809E-05	465.27931677409214	88.976	2.3969	88.903	88.477	90.874	-0.07238					118	56	4	0	0	0	0.84567	1	9281	9281		24.504	0	1	1648000			42430	429	28346	28359	48152	48152					0.07846579558577105
PPLLMLVF	8	Unmodified	_PPLLMLVF_					0	0	0		chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.27984619140625	2	465.280075	928.545597	0.34135	0.00015882	-0.40674	-0.00018925	-0.06539	-3.0425E-05	465.2797316035461	88.798	1.7872	88.849	88.394	90.181	0.050415					106	41	4	0	0	0	0.94009	1	9134	9134		54.895	21.402	1	1568700			42431	429	28346	28359	48153	48153					0.07846579558577105
PPLLMLVF	8	Unmodified	_PPLLMLVF_					0	0	0		chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.280029296875	2	465.280075	928.545597	-1.0328	-0.00048052	0.82771	0.00038512	-0.20505	-9.5405E-05	465.28033562391573	88.755	1.4343	88.962	88.47	89.905	0.20731					94	33	4	0	0	0	0.88393	1	8814	8814		33.493	0	1	1094400			42432	429	28346	28359	48154	48154					0.07846579558577105
PPLLMLVF	8	Unmodified	_PPLLMLVF_					0	0	0		chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	chr4:70202025-70202258|13|21.15|0.06|8.56|+|0|TE_info:MER90a,MER90a_dup274,ERV1,LTR,donor,-,70201567,70202025|None,ODAM|11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.28009033203125	2	465.280075	928.545597	-1.4902	-0.00069338	1.3253	0.00061665	-0.1649	-7.6727E-05	465.28061982816973	88.721	1.2176	89.191	88.797	90.015	0.47068					80	29	4	0	0	0	0.88393	1	10483	10483		33.493	1.5381	1	1086000			42433	429	28346	28359	48155	48155					0.07846579558577105
PPLLPFFV	8	Unmodified	_PPLLPFFV_					0	0	0		ENST00000336702.7_1_11:118987385-118987784:+|nuORF	ENST00000336702.7_1_11:118987385-118987784:+|nuORF	ENST00000336702.7_1_11:118987385-118987784:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.2800598144531	2	465.278389	928.542226	-0.11899	-5.5362E-05	3.6242	0.0016863	3.5052	0.0016309	465.2799248826243	89.079	2.3276	89.147	88.595	90.922	0.068161					120	54	4	0	0	0	0.88393	2	9139	9054;9139		43.626	10.11	1	1620100			42434	10174	28347	28360	48156;48157	48157					0.07509652776229814
PPLLPFFV	8	Unmodified	_PPLLPFFV_					0	0	0		ENST00000336702.7_1_11:118987385-118987784:+|nuORF	ENST00000336702.7_1_11:118987385-118987784:+|nuORF	ENST00000336702.7_1_11:118987385-118987784:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.2800598144531	2	465.278389	928.542226	0.34135	0.00015882	3.2156	0.0014962	3.557	0.001655	465.2797316035461	88.798	1.7872	88.849	88.394	90.181	0.050415					106	41	4	0	0	0	0.88393	1	9170	9170		33.493	2.9893	1	1568700			42435	10174	28347	28360	48158	48158					0.07509652776229814
PPLLPTDS	8	Unmodified	_PPLLPTDS_					0	0	0			REV__nc|ENSG00000163517|Q96DB2-2|HDAC11	REV__nc|ENSG00000163517|Q96DB2-2|HDAC11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2273254394531	2	420.229094	838.443634	0.53933	0.00022664	-3.4769	-0.0014611	-2.9375	-0.0012344	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.86791	1	7307	7307		28.254	0	1	678130	+		42436	29983	28348	28361	48159	48159					0.017950047405179248
PPLLPTVP	8	Unmodified	_PPLLPTVP_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2564697265625	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.82464	1	620	620		21.702	0	1	817900			42437	2943	28349	28362	48160	48160					0.08288775879509558
PPLLQHPVG	9	Unmodified	_PPLLQHPVG_					0	0	0			REV__nc|ENSG00000165458|O15357-2|INPPL1	REV__nc|ENSG00000165458|O15357-2|INPPL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2776184082031	2	479.279452	956.544351	-1.5678	-0.00075141	-2.7191	-0.0013032	-4.2869	-0.0020546	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.7932	1	8350	8350		25.45	0	1	6441000	+		42438	21184	28350	28363	48161	48161					0.0643408151404401
PPLLRYRQLL	10	Unmodified	_PPLLRYRQLL_					0	0	0			REV__ENSG00000073067|ENST00000308919|CYP2W1	REV__ENSG00000073067|ENST00000308919|CYP2W1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	423.5978088378906	3	423.599435	1267.77648	-1.87	-0.00079214	-2.3626	-0.0010008	-4.2326	-0.0017929	423.59834897722675	105.64	2.006	105.71	105.05	107.06	0.073112					176	48	5	0	0	0	0.86587	1	11254	11254		29.17	1.5261	1	4588600	+		42439	16665	28351	28364	48162	48162					0.15329923864783268
PPLLTLSD	8	Unmodified	_PPLLTLSD_					0	0	0			REV__ENSG00000151687|ENST00000684021|ANKAR	REV__ENSG00000151687|ENST00000684021|ANKAR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.26165771484375	2	428.244744	854.474934	0.64355	0.0002756	1.426	0.00061066	2.0695	0.00088625	428.2449285364742	90.743	0.6323	90.896	90.555	91.188	0.15388					25	15	2	0	0	0	0.4196	1	9127	9127		26.796	5.0938	1	353070	+		42440	20264	28352	28365	48163	48163					0.04187577774609963
PPLNDVSIIPL	11	Unmodified	_PPLNDVSIIPL_					0	0	0			REV__nc|ENSG00000196739|Q8IZC6-2|COL27A1	REV__nc|ENSG00000196739|Q8IZC6-2|COL27A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3436889648438	2	589.344989	1176.67542	-0.65315	-0.00038493	-3.1619	-0.0018634	-3.815	-0.0022484	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.68532	1	9495	9495		33.922	4.7721	1	5584100	+		42441	23167	28353	28366	48164	48164					0.09415427371436635
PPLPAKGIISN	11	Unmodified	_PPLPAKGIISN_					0	0	0		ENST00000432329.6_1_2:208467595-208467667:+|nuORF	ENST00000432329.6_1_2:208467595-208467667:+|nuORF	ENST00000432329.6_1_2:208467595-208467667:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8302001953125	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.66929	1	8601	8601		36.447	2.2742	1	1181400			42442	11665	28354	28367	48165	48165					0.10094577919835501
PPLPAKGIISN	11	Unmodified	_PPLPAKGIISN_					0	0	0		ENST00000432329.6_1_2:208467595-208467667:+|nuORF	ENST00000432329.6_1_2:208467595-208467667:+|nuORF	ENST00000432329.6_1_2:208467595-208467667:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8294677734375	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.68532	1	8869	8869		33.922	1.1092	1	1844500			42443	11665	28354	28367	48166	48166					0.10094577919835501
PPLPAKGIISN	11	Unmodified	_PPLPAKGIISN_					0	0	0		ENST00000432329.6_1_2:208467595-208467667:+|nuORF	ENST00000432329.6_1_2:208467595-208467667:+|nuORF	ENST00000432329.6_1_2:208467595-208467667:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8306274414062	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.7342	1	9182	9182		25.574	0.12388	1	6029400			42444	11665	28354	28367	48167	48167					0.10094577919835501
PPLPAKGIISN	11	Unmodified	_PPLPAKGIISN_					0	0	0		ENST00000432329.6_1_2:208467595-208467667:+|nuORF	ENST00000432329.6_1_2:208467595-208467667:+|nuORF	ENST00000432329.6_1_2:208467595-208467667:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8305053710938	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.6921	1	10655	10655		32.812	0.85756	1	5381700			42445	11665	28354	28367	48168	48168					0.10094577919835501
PPLPELLSQAL	11	Unmodified	_PPLPELLSQAL_					0	0	0			REV__ENST00000538010.5_1_12:122499282-122499603:+|nuORF	REV__ENST00000538010.5_1_12:122499282-122499603:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3426513671875	2	589.344989	1176.67542	-0.65438	-0.00038565	-2.8884	-0.0017022	-3.5427	-0.0020879	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.7144	1	9851	9851		29.17	2.4771	1	16804000	+		42446	28430	28355	28368	48169	48169					0.09415427371459373
PPLPEPFLRR	10	Unmodified	_PPLPEPFLRR_					0	0	0			REV__ENSG00000187690|ENST00000342995|EZHIP	REV__ENSG00000187690|ENST00000342995|EZHIP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3550415039062	2	611.358765	1220.70298	-0.22744	-0.00013904	-3.4196	-0.0020906	-3.6471	-0.0022297	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.86348	1	9595	9595		31.53	4.8369	1	8715400	+		42447	22934	28356	28369	48170	48170					0.10145375422303005
PPLPEPFLRR	10	Unmodified	_PPLPEPFLRR_					0	0	0			REV__ENSG00000187690|ENST00000342995|EZHIP	REV__ENSG00000187690|ENST00000342995|EZHIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3552856445312	2	611.358765	1220.70298	-0.40504	-0.00024762	-3.36	-0.0020541	-3.765	-0.0023018	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.86348	1	10113	10113		31.53	2.3598	1	12417000	+		42448	22934	28356	28369	48171	48171					0.10145375422303005
PPLPEPFLRR	10	Unmodified	_PPLPEPFLRR_					0	0	0			REV__ENSG00000187690|ENST00000342995|EZHIP	REV__ENSG00000187690|ENST00000342995|EZHIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3557739257812	2	611.358765	1220.70298	0.21646	0.00013233	-4.1006	-0.0025069	-3.8841	-0.0023746	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.86348	1	10132	10132		31.53	0.96095	1	12399000	+		42449	22934	28356	28369	48172	48172					0.10145375422303005
PPLPPLCF	8	Unmodified	_PPLPPLCF_					0	0	0		ENSG00000104774|ENST00000456935|MAN2B1;ENST00000466794.5_1_19:12769146-12777470:-|nuORF;nc|ENSG00000104774|O00754-2|MAN2B1;ENST00000600281.1_1_19:12776145-12777515:-|nuORF	ENSG00000104774|ENST00000456935|MAN2B1	ENSG00000104774|ENST00000456935|MAN2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2408447265625	2	442.24095	882.467346	0.56789	0.00025114	-0.64039	-0.0002832	-0.0725	-3.2062E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.91333	1	8089	8089		43.626	6.4669	1	1094000			42450	2147	28357	28370	48173	48173					0.021411469733379818
PPLPPPGIR	9	Unmodified	_PPLPPPGIR_					0	0	0		ENSG00000112290|ENST00000392589|WASF1	ENSG00000112290|ENST00000392589|WASF1	ENSG00000112290|ENST00000392589|WASF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2876281738281	2	472.28982	942.565087	-0.10777	-5.0899E-05	-3.4759	-0.0016417	-3.5837	-0.0016926	472.28822632697705	99.434	2.1055	99.484	98.705	100.81	0.049828					105	48	3	0	0	0	0.77546	1	10547	10547		31.955	4.0726	1	555450			42451	2650	28358	28371	48174	48174					0.0915067189371257
PPLPQAKTE	9	Unmodified	_PPLPQAKTE_					0	0	0			REV__ENST00000325147.13_1_11:204876-205128:-|nuORF	REV__ENST00000325147.13_1_11:204876-205128:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	490.77349853515625	2	490.7742	979.533846	-0.96533	-0.00047376	0.04939	2.4239E-05	-0.91594	-0.00044952	490.7740587231148	110.73	0.50124	110.76	110.56	111.06	0.031738					21	13	2	0	0	0	0.7932	1	12150	12150		24.203	2.2429	1	123230	+		42452	25056	28359	28372	48175	48175					0.04326054068951635
PPLPQLPTLTT	11	Unmodified	_PPLPQLPTLTT_					0	0	0			REV__ENSG00000119547|ENST00000491143|ONECUT2	REV__ENSG00000119547|ENST00000491143|ONECUT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3427734375	2	589.344989	1176.67542	-0.40075	-0.00023618	-3.0716	-0.0018102	-3.4723	-0.0020464	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.72106	1	9206	9206		28.081	2.5074	1	4112500	+		42453	18358	28360	28373	48176	48176					0.09415427371413898
PPLPQLPTLTT	11	Unmodified	_PPLPQLPTLTT_					0	0	0			REV__ENSG00000119547|ENST00000491143|ONECUT2	REV__ENSG00000119547|ENST00000491143|ONECUT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3425903320312	2	589.344989	1176.67542	-0.67475	-0.00039766	-3.0874	-0.0018195	-3.7621	-0.0022172	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.67778	1	9543	9543		35.152	4.8343	1	5429300	+		42454	18358	28360	28373	48177	48177					0.09415427371413898
PPLPQLPTLTT	11	Unmodified	_PPLPQLPTLTT_					0	0	0			REV__ENSG00000119547|ENST00000491143|ONECUT2	REV__ENSG00000119547|ENST00000491143|ONECUT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.342529296875	2	589.344989	1176.67542	-0.65438	-0.00038565	-2.8884	-0.0017022	-3.5427	-0.0020879	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.7144	1	9793	9793		29.17	5.6474	1	16804000	+		42455	18358	28360	28373	48178	48178					0.09415427371413898
PPLPQLPTLTT	11	Unmodified	_PPLPQLPTLTT_					0	0	0			REV__ENSG00000119547|ENST00000491143|ONECUT2	REV__ENSG00000119547|ENST00000491143|ONECUT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3423461914062	2	589.344989	1176.67542	0.82336	0.00048524	-4.2828	-0.002524	-3.4594	-0.0020388	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.65746	1	11191	11191		37.812	7.4938	1	9460500	+		42456	18358	28360	28373	48179	48179					0.09415427371413898
PPLPRPLVSMS	11	Unmodified	_PPLPRPLVSMS_					0	0	0		ENST00000549393.1_17:6916754-6917028:+|nuORF	ENST00000549393.1_17:6916754-6917028:+|nuORF	ENST00000549393.1_17:6916754-6917028:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8560180664062	2	597.339184	1192.66381	-1.298	-0.00077535	-2.6154	-0.0015623	-3.9134	-0.0023376	597.3376641321894	94.405	0.73643	94.603	94.163	94.899	0.19827					29	17	3	0	0	0	0.17502	1	9627	9627		36.447	0	1	288770			42457	13635	28361	28374	48180	48180					0.07518907076450887
PPLPSRVN	8	Unmodified	_PPLPSRVN_					0	0	0			REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.253662109375	2	440.255977	878.497401	-1.4584	-0.00064208	-0.14585	-6.4213E-05	-1.6043	-0.0007063	440.25584403378497	78.128	0.57199	78.222	77.962	78.534	0.0942					33	19	2	0	0	0	0.81548	1	7324	7324		20.482	1.1219	1	93416	+		42458	27245	28362	28375	48181	48181					0.05329221962904285
PPLPSRVN	8	Unmodified	_PPLPSRVN_					0	0	0			REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	440.255977	878.497401	-0.15741	-6.9303E-05	-1.7679	-0.00077835	-1.9254	-0.00084765	440.2549920683918	78.39	0.54057	78.446	78.218	78.758	0.056122	0.15085	-0.00038147	NaN	20.482	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55926	+		42459	27245	28362	28375							0.05329221962904285
PPLPSRVN	8	Unmodified	_PPLPSRVN_					0	0	0			REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	440.255977	878.497401	0.0089928	3.9591E-06	-1.9358	-0.00085225	-1.9268	-0.00084829	440.2549419028864	78.472	0.57693	78.418	78.102	78.678	-0.053558	0.12297	-0.00052927	NaN	20.482	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52477	+		42460	27245	28362	28375							0.05329221962904285
PPLPSRVN	8	Unmodified	_PPLPSRVN_					0	0	0			REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	440.255977	878.497401	1.2264	0.00053994	-3.2504	-0.001431	-2.0239	-0.00089106	440.2543940863807	78.295	0.626	78.347	78.157	78.783	0.051674	0.05154	-0.0016868	NaN	20.482	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56776	+		42461	27245	28362	28375							0.05329221962904285
PPLPSRVN	8	Unmodified	_PPLPSRVN_					0	0	0			REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	440.255977	878.497401	-1.468	-0.00064632	-0.14047	-6.1845E-05	-1.6085	-0.00070816	440.25584888347635	78.058	0.76833	78.185	77.93	78.698	0.12695	-0.11039	0.0010515	NaN	20.482	37	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111220	+		42462	27245	28362	28375							0.05329221962904285
PPLPSRVN	8	Unmodified	_PPLPSRVN_					0	0	0			REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	REV__ENST00000471896.5_1_17:37815284-37815866:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	440.255977	878.497401	-1.4584	-0.00064208	-0.14585	-6.4213E-05	-1.6043	-0.0007063	440.25584403378497	78.128	0.57199	78.222	77.962	78.534	0.0942	-0.072891	0.0010468	NaN	20.482	33	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93416	+		42463	27245	28362	28375							0.05329221962904285
PPLPTRQA	8	Unmodified	_PPLPTRQA_					0	0	0		ENSG00000162571|ENST00000379289|TTLL10;nc|ENSG00000162571|Q6ZVT0-2|TTLL10	ENSG00000162571|ENST00000379289|TTLL10	ENSG00000162571|ENST00000379289|TTLL10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2548522949219	2	440.255977	878.497401	-0.56782	-0.00024998	-0.96413	-0.00042447	-1.5319	-0.00067445	440.25540695744235	67.216	0.61303	67.18	66.866	67.479	-0.035698					45	27	2	0	0	0	0.87479	1	6435	6435		30.504	2.6214	1	106500			42464	5697	28363	28376	48182	48182					0.05329221962904285
PPLPVLGF	8	Unmodified	_PPLPVLGF_					0	0	0		ENST00000295851.9_2_2:204193088-204193232:+|nuORF	ENST00000295851.9_2_2:204193088-204193232:+|nuORF	ENST00000295851.9_2_2:204193088-204193232:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.7546691894531	2	420.254914	838.495276	0.7339	0.00030843	0.038874	1.6337E-05	0.77277	0.00032476	420.25486417657544	111.77	0.49524	111.84	111.59	112.09	0.069534					26	14	2	0	0	0	0.94139	1	12014	12014		5.0869	0	1	275090			42465	9722	28364	28377	48183	48183					0.06956793225106139
PPLQFPVF	8	Unmodified	_PPLQFPVF_					0	0	0		ENST00000350221.3_1_15:40005748-40018848:-|nuORF	ENST00000350221.3_1_15:40005748-40018848:-|nuORF	ENST00000350221.3_1_15:40005748-40018848:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.76708984375	2	472.765646	943.516739	0.74188	0.00035074	2.6918	0.0012726	3.4337	0.0016233	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.88915	1	8540	8540		35.201	1.7077	1	547170			42466	10321	28365	28378	48184	48184					0.04272178253813763
PPLRAFRNRR	10	Unmodified	_PPLRAFRNRR_					0	0	0			REV__ENSG00000147324|ENST00000276282|MFHAS1	REV__ENSG00000147324|ENST00000276282|MFHAS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8844604492188	2	641.883804	1281.75306	-0.046992	-3.0164E-05	-1.9848	-0.001274	-2.0318	-0.0013042	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.85934	1	10014	10014		35.618	2.8059	1	2217900	+		42467	20065	28366	28379	48185	48185					0.1234492287080684
PPLRLHLCP	9	Unmodified	_PPLRLHLCP_					0	0	0		ENST00000473880.5_1_7:102112857-102113139:+|nuORF	ENST00000473880.5_1_7:102112857-102113139:+|nuORF	ENST00000473880.5_1_7:102112857-102113139:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.302404	1044.59026	-1.5386	-0.00080516	3.6824	0.001927	2.1438	0.0011218	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.76996	1	8859	8859		33.516	5.6333	1	12189000			42468	12295	28367	28380	48186	48186					0.06974403424624143
PPLRLHLCP	9	Unmodified	_PPLRLHLCP_					0	0	0		ENST00000473880.5_1_7:102112857-102113139:+|nuORF	ENST00000473880.5_1_7:102112857-102113139:+|nuORF	ENST00000473880.5_1_7:102112857-102113139:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3031616210938	2	523.302404	1044.59026	-0.50611	-0.00026485	2.6774	0.0014011	2.1712	0.0011362	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.69914	1	10076	10076		40.573	3.4135	1	3970100			42469	12295	28367	28380	48187	48187					0.06974403424624143
PPLRLSRHGT	10	Unmodified	_PPLRLSRHGT_					0	0	0			REV__ENST00000467502.6_1_19:46886456-46890886:+|nuORF	REV__ENST00000467502.6_1_19:46886456-46890886:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3294677734375	2	567.330539	1132.64652	1.8589	0.0010546	-3.1789	-0.0018035	-1.32	-0.00074889	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86471	1	9862	9862		30.318	5.7985	1	15439000	+		42470	27158	28368	28381	48188	48188					0.0855074758567298
PPLRMLIWLL	10	Unmodified	_PPLRMLIWLL_					0	0	0		ENST00000561950.1_1_15:28650025-28650148:+|nuORF	ENST00000561950.1_1_15:28650025-28650148:+|nuORF	ENST00000561950.1_1_15:28650025-28650148:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3839721679688	2	626.385937	1250.75732	-0.23169	-0.00014513	1.8919	0.0011851	1.6602	0.0010399	626.3870771904016	118.49	0.48918	118.41	118.23	118.71	-0.07531					25	17	2	0	0	0	0.37624	1	12733	12733		25.45	1.9275	1	473240			42471	13844	28369	28382	48189	48189					0.14197251249538567
PPLRQPSPP	9	Unmodified	_PPLRQPSPP_					0	0	0		ENST00000371084.7_1_1:64059068-64059137:+|nuORF	ENST00000371084.7_1_1:64059068-64059137:+|nuORF	ENST00000371084.7_1_1:64059068-64059137:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7804870605469	2	494.782359	987.550165	-1.5759	-0.00077971	-2.3488	-0.0011622	-3.9247	-0.0019419	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.72402	1	8310	8310		38.806	1.647	1	569520			42472	10657	28370	28383	48190	48190					0.05589180025708629
PPLRRSQRL	9	Unmodified	_PPLRRSQRL_					0	0	0			REV__ENST00000225983.10_1_17:42169891-42170465:-|nuORF	REV__ENST00000225983.10_1_17:42169891-42170465:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	561.845703125	2	561.846356	1121.67816	2.4941	0.0014013	-3.582	-0.0020125	-1.0879	-0.00061123	561.8441612955584	96.954	2.2732	96.898	96.37	98.643	-0.056381					143	52	5	0	0	0	0.78058	1	10460	10460		30.504	4.9296	1	1709600	+		42473	24179	28371	28384	48191	48191					0.12218740339608303
PPLRRSQRL	9	Unmodified	_PPLRRSQRL_					0	0	0			REV__ENST00000225983.10_1_17:42169891-42170465:-|nuORF	REV__ENST00000225983.10_1_17:42169891-42170465:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.8457641601562	2	561.846356	1121.67816	1.4106	0.00079252	-2.5998	-0.0014607	-1.1893	-0.00066819	561.8447337891968	96.819	2.411	96.866	96.355	98.766	0.047798					140	55	5	0	0	0	0.78983	1	10270	10270		27.882	2.3082	1	1810100	+		42474	24179	28371	28384	48192	48192					0.12218740339608303
PPLSAAFLKHI	11	Unmodified	_PPLSAAFLKHI_					0	0	0		ENST00000549380.1_1_12:56551408-56551507:+|nuORF	ENST00000549380.1_1_12:56551408-56551507:+|nuORF	ENST00000549380.1_1_12:56551408-56551507:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.855712890625	2	597.355691	1192.69683	0.9357	0.00055895	-0.77395	-0.00046233	0.16175	9.662E-05	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.69995	1	9696	9696		31.53	1.2121	1	19058000			42475	13634	28372	28385	48193	48193					0.10818857190815834
PPLSIPTT	8	Unmodified	_PPLSIPTT_					0	0	0		ENSG00000107863|ENST00000396432|ARHGAP21;nc|ENSG00000107863|Q5T5U3-3|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.23797607421875	2	413.239461	824.46437	-1.33	-0.0005496	-1.1028	-0.00045573	-2.4328	-0.0010053	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.86288	5	7164	7138;7143;7164;7217;7263		42.474	10.52	1	895630			42476	2376;11238	28373	28386	48194;48195;48196;48197;48198	48196					0.04511595120175116
PPLSIPTT	8	Unmodified	_PPLSIPTT_					0	0	0		ENSG00000107863|ENST00000396432|ARHGAP21;nc|ENSG00000107863|Q5T5U3-3|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2368469238281	2	413.239461	824.46437	-0.18778	-7.7597E-05	-2.7175	-0.001123	-2.9053	-0.0012006	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.86288	3	7287	7251;7287;7429		35.201	0	1	1747900			42477	2376;11238	28373	28386	48199;48200;48201	48200					0.04511595120175116
PPLSIPTT	8	Unmodified	_PPLSIPTT_					0	0	0		ENSG00000107863|ENST00000396432|ARHGAP21;nc|ENSG00000107863|Q5T5U3-3|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2373962402344	2	413.239461	824.46437	-1.8341	-0.00075793	0.52075	0.00021519	-1.3134	-0.00054274	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.86288	1	6963	6963		26.796	6.3143	1	2012200			42478	2376;11238	28373	28386	48202	48202					0.04511595120175116
PPLSIPTT	8	Unmodified	_PPLSIPTT_					0	0	0		ENSG00000107863|ENST00000396432|ARHGAP21;nc|ENSG00000107863|Q5T5U3-3|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2376708984375	2	413.239461	824.46437	0.52355	0.00021635	-1.497	-0.00061862	-0.97345	-0.00040227	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.86288	3	7471	6949;7082;7471		33.516	5.2118	1	1692300			42479	2376;11238	28373	28386	48203;48204;48205	48205					0.04511595120175116
PPLSIPTT	8	Unmodified	_PPLSIPTT_					0	0	0		ENSG00000107863|ENST00000396432|ARHGAP21;nc|ENSG00000107863|Q5T5U3-3|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2371520996094	2	413.239461	824.46437	-1.5467	-0.00063915	0.5911	0.00024426	-0.95558	-0.00039489	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.87922	2	6932	6932;7284		42.474	6.5047	1	1341700			42480	2376;11238	28373	28386	48206;48207	48206					0.04511595120175116
PPLSKVPLQQ	10	Unmodified	_PPLSKVPLQQ_					0	0	0		ENST00000470902.5_1_9:130911720-130912803:+|nuORF;nc|ENSG00000148346|P80188-2|LCN2;ENSG00000148346|ENST00000277480|LCN2	ENST00000470902.5_1_9:130911720-130912803:+|nuORF	ENST00000470902.5_1_9:130911720-130912803:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8296508789062	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.80179	1	8681	8681		39.253	0	1	1728300			42481	4954	28374	28387	48208	48208					0.10094577919812764
PPLSLTTP	8	Unmodified	_PPLSLTTP_					0	0	0		ENST00000373998.5_1_X:70474497-70474767:-|nuORF	ENST00000373998.5_1_X:70474497-70474767:-|nuORF	ENST00000373998.5_1_X:70474497-70474767:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2370910644531	2	413.239461	824.46437	-1.33	-0.0005496	-1.1028	-0.00045573	-2.4328	-0.0010053	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.86288	1	6947	6947		26.796	0	1	895630			42482	10762	28375	28388	48209	48209					0.04511595120175116
PPLSLTTP	8	Unmodified	_PPLSLTTP_					0	0	0		ENST00000373998.5_1_X:70474497-70474767:-|nuORF	ENST00000373998.5_1_X:70474497-70474767:-|nuORF	ENST00000373998.5_1_X:70474497-70474767:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2381591796875	2	413.239461	824.46437	-0.091267	-3.7715E-05	-2.9715	-0.001228	-3.0628	-0.0012657	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.86791	1	8643	8643		28.254	0	1	1247200			42483	10762	28375	28388	48210	48210					0.04511595120175116
PPLSMPIAEL	10	Unmodified	_PPLSMPIAEL_					0	0	0			REV__CON__P34955	REV__CON__P34955	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.2939453125	2	534.293911	1066.57327	-0.74259	-0.00039676	2.3108	0.0012346	1.5682	0.00083788	534.2951504671357	88.691	3.5877	88.691	87.598	91.185	0					140	83	2	0	0	0	0.8608	1	8607	8607		34.173	0	1	382360	+	+	42484	15990	28376	28389	48211	48211					0.042644380281672056
PPLSPVPPQS	10	Unmodified	_PPLSPVPPQS_					0	0	0			REV__nc|ENSG00000082074|O15117|FYB1	REV__nc|ENSG00000082074|O15117|FYB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.22283935546875	2	509.782025	1017.5495	0.8193	0.00041766	-3.0839	-0.0015721	-2.2646	-0.0011544	509.78172238637177	88.676	0.20508	89.125	88.955	89.16	0.44893					6	4	2	0	0	0	0.37624	1	10443	10443		39.253	1.4413	1	38606	+		42485	16831	28377	28390	48212	48212					0.04142340586008686
PPLSSVHNS	9	Unmodified	_PPLSSVHNS_					0	0	0			REV__ENSG00000055609|ENST00000262189|KMT2C	REV__ENSG00000055609|ENST00000262189|KMT2C	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.2400207519531	2	469.240524	936.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.168	1	71.298	70.798	71.798	0.12965								0	0	0	0.30416	1	6482	6482		29.15	3.6994	1		+		42486	16413	28378	28391	48213	48213					-0.00427976141986619
PPLTERVLKLF	11	Unmodified	_PPLTERVLKLF_					0	0	0			REV__nc|ENSG00000089685|O15392-5|BIRC5	REV__nc|ENSG00000089685|O15392-5|BIRC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.27288818359375	3	438.271096	1311.79146	0.73903	0.00032389	3.6074	0.001581	4.3464	0.0019049	438.27258626082147	106.07	0.86208	106.16	105.83	106.7	0.099007					90	20	5	0	0	0	0.74771	1	11384	11384		22.562	1.7244	1	9065500	+		42487	29722	28379	28392	48214	48214					0.14803370942127003
PPLTKLVGR	9	Unmodified	_PPLTKLVGR_					0	0	0			REV__ENST00000546455.5_1_12:47473502-47610158:+|nuORF	REV__ENST00000546455.5_1_12:47473502-47610158:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.81640625	2	490.816202	979.617851	-0.13641	-6.6952E-05	-1.4567	-0.00071496	-1.5931	-0.00078191	490.8153746767679	73.803	0.85621	74.362	74.024	74.881	0.55891					42	20	3	0	0	0	0.7932	1	8321	8321		23.042	3.6825	1	628450	+		42488	28538	28380	28393	48215	48215					0.1272262995652227
PPLTSRVIPL	10	Unmodified	_PPLTSRVIPL_					0	0	0		nc|ENSG00000106665|Q9UDT6-2|CLIP2;ENSG00000106665|ENST00000223398|CLIP2	nc|ENSG00000106665|Q9UDT6-2|CLIP2	nc|ENSG00000106665|Q9UDT6-2|CLIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8397216796875	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.43769	4	10489	10489;10513;10537;10604		60.972	6.9583	1	44929000			42489	2311	28381	28394	48216;48217;48218;48219	48216					0.12811168299458586
PPLVLFLL	8	Unmodified	_PPLVLFLL_					0	0	0		ENSG00000185933|ENST00000329905|CALHM1	ENSG00000185933|ENST00000329905|CALHM1	ENSG00000185933|ENST00000329905|CALHM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3013916015625	2	456.301865	910.589176	-0.23117	-0.00010549	-1.9289	-0.00088017	-2.1601	-0.00098566	456.30086790597977	45.013	2.0189	44.944	43.946	45.965	-0.068634					97	50	2	0	0	0	0.84567	1	3293	3293		24.504	0	1	498520			42490	7758	28382	28395	48220	48220					0.13030512327384258
PPLVLPVLL	9	Unmodified	_PPLVLPVLL_					0	0	0		ENSG00000140470|ENST00000268070|ADAMTS17	ENSG00000140470|ENST00000268070|ADAMTS17	ENSG00000140470|ENST00000268070|ADAMTS17	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.8013610839844	2	480.828246	959.64194	-0.095332	-4.5838E-05	1.422	0.00068372	1.3266	0.00063788	480.82937826719126	95.3	0.24854	95.368	95.141	95.389	0.068344					6	5	2	0	0	0	0.20789	1	9942	9942		4.3163	3.1111	1	28482			42491	4434	28383	28396	48221	48221					0.16050470390189275
PPLVLPVLL	9	Unmodified	_PPLVLPVLL_					0	0	0		ENSG00000140470|ENST00000268070|ADAMTS17	ENSG00000140470|ENST00000268070|ADAMTS17	ENSG00000140470|ENST00000268070|ADAMTS17	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.8004455566406	2	480.828246	959.64194	-0.54403	-0.00026159	-0.35325	-0.00016985	-0.89729	-0.00043144	480.828038236372	95.183	0.16089	95.23	95.129	95.29	0.046982					6	3	2	0	0	0	0.20789	1	10060	10060		21.702	7.0382	1	91556			42492	4434	28383	28396	48222	48222					0.16050470390189275
PPLWLALANNL	11	Unmodified	_PPLWLALANNL_					0	0	0		ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1;ENST00000571547.1_1_17:4084514-4085556:-|nuORF	ENSG00000185722|ENST00000341657|ANKFY1	ENSG00000185722|ENST00000341657|ANKFY1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.355712890625	2	611.353148	1220.69174	2.4219	0.0014807	2.8207	0.0017244	5.2426	0.0032051	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.72918	1	10276	10276		26.693	1.1189	1	12656000			42493	7737	28384	28397	48223	48223					0.09022553328168215
PPLWPEGRSS	10	Unmodified	_PPLWPEGRSS_					0	0	0			REV__nc|ENSG00000168314|Q13875-4|MOBP	REV__nc|ENSG00000168314|Q13875-4|MOBP	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.2876586914062	2	563.288005	1124.56146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.54	1	111.48	110.98	111.98	-0.059937								0	0	0	0.45132	1	12138	12138		25.574	2.9944	1		+		42494	30013	28385	28398	48224	48224					0.004159573291872221
PPMGEKVRLIV	11	Unmodified	_PPMGEKVRLIV_					0	0	0			REV__ENSG00000170927|ENST00000371117|PKHD1	REV__ENSG00000170927|ENST00000371117|PKHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8690795898438	2	619.868108	1237.72166	0.87763	0.00054401	1.2769	0.0007915	2.1545	0.0013355	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.70737	1	10030	10030		30.318	1.1477	1	6574700	+		42495	21700	28386	28399	48225	48225					0.11231169001871422
PPMKLRLTVDL	11	Unmodified	_PPMKLRLTVDL_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8820190429688	2	641.881216	1281.74788	2.2004	0.0014124	-0.30032	-0.00019277	1.9001	0.0012196	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.70737	1	10477	10477		30.318	2.2362	1	3624200	+		42496	16482	28387	28400	48226	48226					0.1182743817332721
PPMKLRLTVDL	11	Unmodified	_PPMKLRLTVDL_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8828125	2	641.881216	1281.74788	2.6248	0.0016848	-0.67845	-0.00043549	1.9463	0.0012493	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.67778	1	11750	11750		35.152	0	1	4455800	+		42497	16482	28387	28400	48227	48227					0.1182743817332721
PPMMPILAKLK	11	Unmodified	_PPMMPILAKLK_					0	0	0			REV__ENST00000300403.10_1_20:30345217-30345373:+|nuORF	REV__ENST00000300403.10_1_20:30345217-30345373:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8687744140625	2	619.871805	1237.72906	-0.30632	-0.00018988	-3.8224	-0.0023694	-4.1287	-0.0025593	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.61774	1	9898	9898		42.396	11.892	1	2103100	+		42498	24748	28388	28401	48228	48228					0.11970185277914425
PPMMPILAKLK	11	Unmodified	_PPMMPILAKLK_					0	0	0			REV__ENST00000300403.10_1_20:30345217-30345373:+|nuORF	REV__ENST00000300403.10_1_20:30345217-30345373:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8692626953125	2	619.871805	1237.72906	0.62564	0.00038782	-4.4185	-0.0027389	-3.7929	-0.0023511	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.68378	1	10169	10169		34.173	1.422	1	4779100	+		42499	24748	28388	28401	48229	48229					0.11970185277914425
PPMVREVL	8	Unmodified	_PPMVREVL_					0	0	0			REV__nc|ENSG00000166589|O75309-3|CDH16	REV__nc|ENSG00000166589|O75309-3|CDH16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7689514160156	2	470.767863	939.521173	-0.93673	-0.00044098	3.3148	0.0015605	2.3781	0.0011195	470.7692759714824	53.261	1.827	53.278	52.753	54.58	0.017487					126	54	3	0	0	0	0.92973	1	4671	4671		50.025	0.48849	1	1396300	+		42500	21306	28389	28402	48230	48230					0.04899319405069491
PPMVREVL	8	Unmodified	_PPMVREVL_					0	0	0			REV__nc|ENSG00000166589|O75309-3|CDH16	REV__nc|ENSG00000166589|O75309-3|CDH16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7687072753906	2	470.767863	939.521173	-0.38205	-0.00017986	3.0519	0.0014368	2.6699	0.0012569	470.769153299195	81.635	1.0784	82.062	81.671	82.749	0.42646					51	26	2	0	0	0	0.88915	1	9383	9383		35.201	4.6971	1	1307200	+		42501	21306	28389	28402	48231	48231					0.04899319405069491
PPNEIKNSVLP	11	Unmodified	_PPNEIKNSVLP_					0	0	0		ENST00000392253.2_1_2:202276596-202276920:-|nuORF	ENST00000392253.2_1_2:202276596-202276920:-|nuORF	ENST00000392253.2_1_2:202276596-202276920:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3665161132812	2	604.337695	1206.66084	-1.2753	-0.00077073	-1.8424	-0.0011135	-3.1178	-0.0018842	604.33779402842	105.2	0.20331	105.27	105.14	105.34	0.073112					6	4	2	0	0	0	0.17404	1	11120	11120		43.651	20.128	1	95426			42502	11016	28390	28403	48232	48232					0.06577355223294035
PPNGLRPRLN	10	Unmodified	_PPNGLRPRLN_					0	0	0			REV__ENST00000358201.8_2_16:28936491-28936821:-|nuORF	REV__ENST00000358201.8_2_16:28936491-28936821:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3297729492188	2	567.330539	1132.64652	-1.2006	-0.00068114	-0.16538	-9.3826E-05	-1.366	-0.00077496	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.86718	2	9814	9814;10055		27.882	2.4902	1	15673000	+		42503	25428	28391	28404	48233;48234	48233					0.0855074758567298
PPNLELLLLG	10	Unmodified	_PPNLELLLLG_					0	0	0			REV__nc|ENSG00000168405|Q9Y471-4|CMAHP	REV__nc|ENSG00000168405|Q9Y471-4|CMAHP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.832275390625	2	539.828975	1077.6434	2.7941	0.0015083	3.6313	0.0019603	6.4254	0.0034686	539.830784350364	95.087	2.072	95.029	94.598	96.67	-0.057526					123	48	4	0	0	0	0.8608	2	10152	10152;10178		34.173	4.331	1	1548000	+		42504	30015	28392	28405	48235;48236	48235					0.10768059688280118
PPNPKRQQR	9	Unmodified	_PPNPKRQQR_					0	0	0		ENST00000537699.1_1_12:10603035-10603776:-|nuORF;nc|ENSG00000134545|P26715-2|KLRC1;ENSG00000134545|ENST00000359151|KLRC1	ENST00000537699.1_1_12:10603035-10603776:-|nuORF	ENST00000537699.1_1_12:10603035-10603776:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8201293945312	2	560.820338	1119.62612	2.0312	0.0011391	-2.9645	-0.0016625	-0.93332	-0.00052343	560.8185510503406	92.547	2.8653	92.482	91.358	94.223	-0.06414					202	67	4	0	0	0	0.77546	1	9746	9746		31.955	0	1	788180			42505	3942	28393	28406	48237	48237					0.07109576925836336
PPNPPGPLITG	11	Unmodified	_PPNPPGPLITG_					0	0	0		ENSG00000197024|ENST00000475153|ZNF398;nc|ENSG00000197024|Q8TD17-2|ZNF398	ENSG00000197024|ENST00000475153|ZNF398	ENSG00000197024|ENST00000475153|ZNF398	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2931518554688	2	530.295299	1058.57605	-0.066725	-3.5384E-05	-3.5889	-0.0019032	-3.6556	-0.0019386	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.65746	1	9006	9006		37.812	2.1932	1	2084800			42506	8125	28394	28407	48238	48238					0.04910029477309763
PPNPPGPLITG	11	Unmodified	_PPNPPGPLITG_					0	0	0		ENSG00000197024|ENST00000475153|ZNF398;nc|ENSG00000197024|Q8TD17-2|ZNF398	ENSG00000197024|ENST00000475153|ZNF398	ENSG00000197024|ENST00000475153|ZNF398	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2935791015625	2	530.295299	1058.57605	0.74166	0.0003933	-4.3452	-0.0023043	-3.6036	-0.001911	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.66929	1	9160	9160		36.447	2.2742	1	2081200			42507	8125	28394	28407	48239	48239					0.04910029477309763
PPNPPGPLITG	11	Unmodified	_PPNPPGPLITG_					0	0	0		ENSG00000197024|ENST00000475153|ZNF398;nc|ENSG00000197024|Q8TD17-2|ZNF398	ENSG00000197024|ENST00000475153|ZNF398	ENSG00000197024|ENST00000475153|ZNF398	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2933959960938	2	530.295299	1058.57605	-1.5163	-0.00080409	-2.0724	-0.001099	-3.5887	-0.0019031	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.58425	2	9072	8975;9072		45.972	1.8554	1	1686700			42508	8125	28394	28407	48240;48241	48241					0.04910029477309763
PPNPVVKARR	10	Unmodified	_PPNPVVKARR_					0	0	0		ENSG00000188191|ENST00000537384|PRKAR1B	ENSG00000188191|ENST00000537384|PRKAR1B	ENSG00000188191|ENST00000537384|PRKAR1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3290405273438	2	567.348732	1132.68291	0.48885	0.00027735	-3.284	-0.0018632	-2.7952	-0.0015858	567.3463720342561	95.274	1.287	95.505	95.108	96.395	0.23103					43	30	2	0	0	0	0.37624	1	9764	9764		34.173	9.9698	1	60428			42509	7914	28395	28408	48242	48242					0.1218762448236248
PPNPVVKARR	10	Unmodified	_PPNPVVKARR_					0	0	0		ENSG00000188191|ENST00000537384|PRKAR1B	ENSG00000188191|ENST00000537384|PRKAR1B	ENSG00000188191|ENST00000537384|PRKAR1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.329345703125	2	567.348732	1132.68291	-1.3957	-0.00079187	-1.7279	-0.00098034	-3.1237	-0.0017722	567.3472437056598	95.615	1.2863	95.817	94.903	96.19	0.20242					41	30	2	0	0	0	0.37624	1	9732	9732		31.53	16.836	1	61180			42510	7914	28395	28408	48243	48243					0.1218762448236248
PPNPVVKGRR	10	Unmodified	_PPNPVVKGRR_					0	0	0		nc|ENSG00000108946|P10644-2|PRKAR1A;ENSG00000108946|ENST00000589228|PRKAR1A	nc|ENSG00000108946|P10644-2|PRKAR1A	nc|ENSG00000108946|P10644-2|PRKAR1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.34033203125	2	560.340907	1118.66726	0.86176	0.00048288	-2.22	-0.001244	-1.3582	-0.00076107	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.86218	2	10762	10726;10762		32.812	6.1195	1	126390000			42511	2441	28396	28409	48244;48245	48245					0.11267337965318802
PPNQNIPR	8	Unmodified	_PPNQNIPR_					0	0	0		nc|ENSG00000122779|O15164-2|TRIM24;ENSG00000122779|ENST00000343526|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.2554016113281	2	468.256508	934.498464	-1.5153	-0.00070955	-2.1681	-0.0010152	-3.6834	-0.0017248	468.2553507419965	82.534	3.6867	82.66	80.393	84.08	0.12601					150	88	2	0	0	0	0.87922	1	7917	7917		31.955	0.42505	1	169950			42512	3246	28397	28410	48246	48246					0.028594363317893112
PPNRRGLPR	9	Unmodified	_PPNRRGLPR_					0	0	0		ENST00000610085.1_1_7:148395223-148395484:-|nuORF	ENST00000610085.1_1_7:148395223-148395484:-|nuORF	ENST00000610085.1_1_7:148395223-148395484:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8170776367188	2	531.817599	1061.62064	1.595	0.00084823	-2.9849	-0.0015874	-1.3899	-0.00073919	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.77546	2	9035	9035;9060		31.955	7.7521	1	1345000			42513	14494	28398	28411	48247;48248	48247					0.09229898134026371
PPNRRGLPR	9	Unmodified	_PPNRRGLPR_					0	0	0		ENST00000610085.1_1_7:148395223-148395484:-|nuORF	ENST00000610085.1_1_7:148395223-148395484:-|nuORF	ENST00000610085.1_1_7:148395223-148395484:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8167114257812	2	531.817599	1061.62064	0.70533	0.00037511	-2.1628	-0.0011502	-1.4575	-0.00077513	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.74721	1	8554	8554		37.159	16.212	1	1163300			42514	14494	28398	28411	48249	48249					0.09229898134026371
PPNSIRFGCV	10	Unmodified	_PPNSIRFGCV_					0	0	0			REV__ENSG00000115919|ENST00000264170|KYNU	REV__ENSG00000115919|ENST00000264170|KYNU	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.316650390625	2	545.279126	1088.5437	-0.33617	-0.00018331	-1.621	-0.00088391	-1.9572	-0.0010672	545.2786859301698	88.784	0.91549	88.852	88.555	89.471	0.068161					42	21	3	0	0	0	0.37624	1	9016	9016		60.118	35.916	1	325660	+		42515	18162	28399	28412	48250	48250					0.0029691880267819215
PPNSKEKMLR	10	Unmodified	_PPNSKEKMLR_					0	0	0		ENST00000515260.2_2_7:107269304-107269751:+|nuORF	ENST00000515260.2_2_7:107269304-107269751:+|nuORF	ENST00000515260.2_2_7:107269304-107269751:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	600.334228515625	2	600.33189	1198.64923	-0.3237	-0.00019433	3.5718	0.0021442	3.2481	0.0019499	600.3339047819856	94.278	2.3342	94.325	93.119	95.453	0.046173					76	55	2	0	0	0	0.66675	1	9879	9879		46.457	19.764	1	671570			42516	13079	28400	28413	48251	48251					0.05784834928294913
PPNTSPFTAE	10	Unmodified	_PPNTSPFTAE_					0	0	0		nc|ENSG00000039068|P12830-2|CDH1;ENST00000562836.5_1_16:68797408-68867399:+|nuORF;ENSG00000039068|ENST00000261769|CDH1	nc|ENSG00000039068|P12830-2|CDH1	nc|ENSG00000039068|P12830-2|CDH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.7484130859375	2	530.750921	1059.48729	0.87025	0.00046189	0.076443	4.0572E-05	0.94669	0.00050246	530.7511669351949	15.467	0.19918	15.443	15.325	15.524	-0.024207					8	5	2	0	0	0	0.85939	1	43	43		23.042	0	1	51332			42517	919	28401	28414	48252	48252					-0.040074305529969934
PPNVALTCL	9	Unmodified	_PPNVALTCL_					0	0	0		nc|ENSG00000160584|Q9Y2K2-8|SIK3;ENSG00000160584|ENST00000445177|SIK3;nc|ENSG00000160584|Q9Y2K2-7|SIK3;nc|ENSG00000160584|Q9Y2K2|SIK3;ENST00000480468.1_1_11:116728475-116732017:-|nuORF;nc|ENSG00000160584|Q9Y2K2-6|SIK3	nc|ENSG00000160584|Q9Y2K2-8|SIK3	nc|ENSG00000160584|Q9Y2K2-8|SIK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2537536621094	2	464.252046	926.489538	0.61869	0.00028723	3.7395	0.0017361	4.3582	0.0020233	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.74721	1	8097	8097		37.159	4.3467	1	1482000			42518	5594	28402	28415	48253	48253					0.023353266510980575
PPNVFIGK	8	Unmodified	_PPNVFIGK_					0	0	0		nc|ENSG00000167588|P21695-2|GPD1	nc|ENSG00000167588|P21695-2|GPD1	nc|ENSG00000167588|P21695-2|GPD1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.25445556640625	2	436.255446	870.496338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.55	1	111.59	111.09	112.09	0.041832								0	0	0	0.29498	1	13494	13494		26.796	5.0938	1				42519	15074	28403	28416	48254	48254					0.0559100759400053
PPPAAGGA	8	Unmodified	_PPPAAGGA_					0	0	0			REV__ENSG00000104967|ENST00000263257|NOVA2	REV__ENSG00000104967|ENST00000263257|NOVA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	637.2738647460938	1	637.330402	636.323125	1.3488	0.00085962	-2.8205	-0.0017976	-1.4717	-0.00093795	637.3281913097769	83.165	0.45705	83.62	83.438	83.895	0.45556					12	10	2	0	0	0	0.4196	1	9690	9690		5.0869	0	1	112950	+		42520	17494	28404	28417	48255	48255					-0.009583584624465402
PPPAGFKR	8	Unmodified	_PPPAGFKR_					0	0	0		ENST00000493269.1_1_6:88224133-88226588:-|nuORF	ENST00000493269.1_1_6:88224133-88226588:-|nuORF	ENST00000493269.1_1_6:88224133-88226588:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7546081542969	2	435.253237	868.491922	0.060967	2.6536E-05	-1.9562	-0.00085144	-1.8952	-0.0008249	435.2512504176026	77.105	2.0148	77.505	76.162	78.177	0.3997					95	54	4	0	0	0	0.82464	1	8788	8788		21.702	0	1	572660			42521	12723	28405	28418	48256	48256					0.05241543171075591
PPPAGFKR	8	Unmodified	_PPPAGFKR_					0	0	0		ENST00000493269.1_1_6:88224133-88226588:-|nuORF	ENST00000493269.1_1_6:88224133-88226588:-|nuORF	ENST00000493269.1_1_6:88224133-88226588:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25201416015625	2	435.253237	868.491922	-0.32142	-0.0001399	-4.1582	-0.0018099	-4.4796	-0.0019498	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.83466	1	9376	9376		23.037	1.0768	1	2020200			42522	12723	28405	28418	48257	48257					0.05241543171075591
PPPAIKSP	8	Unmodified	_PPPAIKSP_					0	0	0		ENSG00000169855|ENST00000464233|ROBO1;nc|ENSG00000169855|Q9Y6N7-2|ROBO1;nc|ENSG00000169855|Q9Y6N7-6|ROBO1;nc|ENSG00000169855|Q9Y6N7-5|ROBO1;nc|ENSG00000169855|Q9Y6N7-4|ROBO1;nc|ENSG00000169855|Q9Y6N7-3|ROBO1	ENSG00000169855|ENST00000464233|ROBO1	ENSG00000169855|ENST00000464233|ROBO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.2118225097656	2	403.742171	805.469789	0.80375	0.00032451	-0.35123	-0.0001418	0.45253	0.0001827	403.74190766990506	33.15	0.54911	33.362	33.102	33.651	0.21168					25	12	3	0	0	0	0.4196	1	2404	2404		42.474	10.52	1	333430			42523	6529	28406	28419	48258	48258					0.059273187026519736
PPPAIPPH	8	Unmodified	_PPPAIPPH_					0	0	0			REV__nc|ENSG00000105879|Q75N03-2|CBLL1	REV__nc|ENSG00000105879|Q75N03-2|CBLL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.1942138671875	2	413.234513	824.454474	0.57738	0.00023859	0.23788	9.8298E-05	0.81526	0.00033689	413.2331863428207	83.378	0.51482	83.525	83.229	83.744	0.14695					13	11	2	0	0	0	0.4196	1	8094	8094		33.493	8.989	1	37222	+		42524	17580	28407	28420	48259	48259					0.03522451905462276
PPPALKPLSSL	11	Unmodified	_PPPALKPLSSL_					0	0	0		ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE	ENSG00000142599|ENST00000400908|RERE	ENSG00000142599|ENST00000400908|RERE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3403930664062	2	560.342249	1118.66995	-1.4184	-0.0007948	-1.6522	-0.00092581	-3.0706	-0.0017206	560.3412485593329	105.6	1.2349	105.67	104.77	106	0.073112					105	30	5	0	0	0	0.72739	1	11104	11104		27.047	0.3544	1	1607400			42525	4572	28408	28421	48260	48260					0.11535748579603933
PPPALRPLN	9	Unmodified	_PPPALRPLN_					0	0	0		ENSG00000111676|ENST00000396684|ATN1	ENSG00000111676|ENST00000396684|ATN1	ENSG00000111676|ENST00000396684|ATN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7904968261719	2	487.792727	973.5709	-1.3135	-0.00064074	-3.0168	-0.0014716	-4.3304	-0.0021123	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.74721	1	8465	8465		37.159	5.2042	1	2239000			42526	2600	28409	28422	48261	48261					0.0830577040536582
PPPARRGG	8	Unmodified	_PPPARRGG_					0	0	0			REV__ENSG00000161509|ENST00000293190|GRIN2C	REV__ENSG00000161509|ENST00000293190|GRIN2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.2325744628906	2	404.232836	806.45112	0.88499	0.00035774	-0.87361	-0.00035314	0.011373	4.5972E-06	404.2323708520731	84.87	3.8747	85.31	83.261	87.136	0.43967					162	94	4	0	0	0	0.87276	1	9902	9902		29.842	0	1	2366300	+		42527	20765	28410	28423	48262	48262					0.040152018514731935
PPPARRGG	8	Unmodified	_PPPARRGG_					0	0	0			REV__ENSG00000161509|ENST00000293190|GRIN2C	REV__ENSG00000161509|ENST00000293190|GRIN2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.2323303222656	2	404.232836	806.45112	-0.39209	-0.00015849	0.40601	0.00016412	0.013927	5.6299E-06	404.23288491550113	84.848	3.8677	85.296	83.349	87.217	0.44736					164	94	4	0	0	0	0.87276	1	9935	9935		29.842	0	1	3295900	+		42528	20765	28410	28423	48263	48263					0.040152018514731935
PPPCVLRPPR	10	Unmodified	_PPPCVLRPPR_					0	0	0		ENST00000548759.1_1_12:113495266-113495848:+|nuORF	ENST00000548759.1_1_12:113495266-113495848:+|nuORF	ENST00000548759.1_1_12:113495266-113495848:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	566.798095703125	2	566.326411	1130.63827	-0.15541	-8.801E-05	3.2564	0.0018442	3.101	0.0017562	566.3283021591078	17.09	0.21493	17.011	16.915	17.13	-0.079054					13	7	2	0	0	0	0.37624	1	179	179		27.882	2.4321	1	33409			42529	13622	28411	28424	48264	48264					0.07817477344656254
PPPDVTLSL	9	Unmodified	_PPPDVTLSL_					0	0	0		nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2	nc|ENSG00000173698|Q8IZP9-8|ADGRG2	nc|ENSG00000173698|Q8IZP9-8|ADGRG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.76141357421875	2	469.7633	937.512048	0.13992	6.5729E-05	-4.1158	-0.0019335	-3.9759	-0.0018677	469.7613068625106	35.735	1.6772	35.674	35.283	36.96	-0.060337					67	47	2	0	0	0	0.72402	1	1982	1982		38.806	12.01	1	144740			42530	15104	28412	28425	48265	48265					0.0407924932038668
PPPELLQT	8	Unmodified	_PPPELLQT_					0	0	0		ENSG00000197386|ENST00000355072|HTT;ENST00000506137.1_1_4:3117057-3123221:+|nuORF	ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.76141357421875	2	447.750193	893.485833	1.2328	0.00055201	-2.7032	-0.0012103	-1.4703	-0.00065834	447.748538222468	23.658	0.21629	23.084	22.92	23.136	-0.57415					8	4	3	0	0	0	0.4196	1	1064	1064		25.45	0	1	103860			42531	8159	28413	28426	48266	48266					0.03482980148908155
PPPFLSRN	8	Unmodified	_PPPFLSRN_					0	0	0		ENST00000592024.1_1_17:40253781-40254356:-|nuORF	ENST00000592024.1_1_17:40253781-40254356:-|nuORF	ENST00000592024.1_1_17:40253781-40254356:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2533874511719	2	464.255977	926.497401	-1.0566	-0.00049054	-3.1539	-0.0014642	-4.2105	-0.0019547	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.884	1	8378	8378		33.516	6.7195	1	1603800			42532	14284	28414	28427	48267	48267					0.031212219629082938
PPPFPPGRRL	10	Unmodified	_PPPFPPGRRL_					0	0	0			REV__nc|ENSG00000150527|Q96PC5-8|MIA2	REV__nc|ENSG00000150527|Q96PC5-8|MIA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3300170898438	2	567.33255	1132.65055	-1.3957	-0.00079181	-3.4705	-0.0019689	-4.8662	-0.0027608	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86452	1	9225	9225		30.504	0	1	17338000	+		42533	29928	28415	28428	48268	48268					0.08952837079368692
PPPFVTRTT	9	Unmodified	_PPPFVTRTT_					0	0	0			REV__ENST00000581396.5_1_17:17750516-17750942:-|nuORF	REV__ENST00000581396.5_1_17:17750516-17750942:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2797546386719	2	508.282192	1014.54983	-1.5862	-0.00080625	-2.312	-0.0011752	-3.8982	-0.0019814	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.76255	1	8680	8680		35.618	4.0885	1	1814000	+		42534	29048	28416	28429	48269	48269					0.04313760305853975
PPPGPPRV	8	Unmodified	_PPPGPPRV_					0	0	0		nc|ENSG00000166689|Q6IQ23|PLEKHA7;nc|ENSG00000166689|Q6IQ23-2|PLEKHA7;ENSG00000166689|ENST00000531066|PLEKHA7;ENSG00000095752|ENST00000264563|IL11;nc|ENSG00000166689|Q6IQ23-3|PLEKHA7;ENST00000525781.5_1_11:16810636-16838952:-|nuORF	nc|ENSG00000166689|Q6IQ23|PLEKHA7	nc|ENSG00000166689|Q6IQ23|PLEKHA7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.73944091796875	2	408.739963	815.465373	-1.9297	-0.00078873	1.2966	0.00052999	-0.63302	-0.00025874	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.83466	1	2146	2146		23.037	1.0768	1	521170			42535	6221	28417	28430	48270	48270					0.05025854279756459
PPPGVLPEID	10	Unmodified	_PPPGVLPEID_					0	0	0		nc|ENSG00000163629|Q12923-2|PTPN13;nc|ENSG00000163629|Q12923-3|PTPN13;ENSG00000163629|ENST00000411767|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13	nc|ENSG00000163629|Q12923-2|PTPN13	nc|ENSG00000163629|Q12923-2|PTPN13	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7935180664062	2	517.281857	1032.54916	-0.84507	-0.00043714	1.2772	0.00066069	0.43215	0.00022355	517.2824689109154	88.153	0.61036	88.153	87.855	88.465	0					23	13	2	0	0	0	0.37624	1	8475	8475		27.882	13.745	1	83716			42536	5841	28418	28431	48271	48271					0.034189208661246084
PPPHHLYAK	9	Unmodified	_PPPHHLYAK_					0	0	0		ENSG00000166450|ENST00000389286|PRTG	ENSG00000166450|ENST00000389286|PRTG	ENSG00000166450|ENST00000389286|PRTG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2930297851562	2	530.290351	1058.56615	1.2413	0.00065826	4.439	0.0023539	5.6803	0.0030122	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.69914	1	9379	9379		40.573	4.1259	1	1864800			42537	6198	28419	28432	48272	48272					0.039208862625855545
PPPIALAVVPS	11	Unmodified	_PPPIALAVVPS_					0	0	0		ENSG00000277058|ENST00000617807|HNRNPCL3;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000179172|ENST00000317869|HNRNPCL1	ENSG00000277058|ENST00000617807|HNRNPCL3	ENSG00000277058|ENST00000617807|HNRNPCL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8209228515625	2	530.823692	1059.63283	-0.85098	-0.00045172	-4.1464	-0.002201	-4.9974	-0.0026527	530.8213432265311	82.745	2.1308	82.745	82.264	84.395	0					134	52	5	0	0	0	0.60283	1	7732	7732		44.117	6.9577	1	4119600			42538	7253	28420	28433	48273	48273					0.10540077033851958
PPPILKFY	8	Unmodified	_PPPILKFY_					0	0	0		ENST00000467155.6_1_17:46683509-46683713:+|nuORF	ENST00000467155.6_1_17:46683509-46683713:+|nuORF	ENST00000467155.6_1_17:46683509-46683713:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7912292480469	2	487.789121	973.56369	-1.0855	-0.00052952	3.9357	0.0019198	2.8501	0.0013903	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.88915	1	7621	7621		35.201	0.04869	1	309700			42539	12148	28421	28434	48274	48274					0.0758503780493811
PPPIPVHTN	9	Unmodified	_PPPIPVHTN_					0	0	0			REV__ENST00000491449.5_1_22:50658476-50664613:-|nuORF	REV__ENST00000491449.5_1_22:50658476-50664613:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.26702880859375	2	486.269084	970.523616	-0.087647	-4.262E-05	-3.8323	-0.0018635	-3.9199	-0.0019061	486.26710603472304	86.356	4.0954	86.423	85.117	89.212	0.067444					314	95	4	0	0	0	0.69624	1	8842	8842		40.778	5.1599	1	1700900	+		42540	18762	28422	28435	48275	48275					0.037174911343640815
PPPLAAQQG	9	Unmodified	_PPPLAAQQG_					0	0	0			REV__ENST00000398061.5_1_21:45379519-45387977:+|nuORF	REV__ENST00000398061.5_1_21:45379519-45387977:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.5945129394531	2	439.74016	877.465767	2.5588	0.0011252	-2.2324	-0.00098166	0.32639	0.00014353	439.74039795931435	25.153	0.22357	24.722	24.627	24.851	-0.4311					6	4	2	0	0	0	0.20789	1	1278	1278		24.203	0	1	14498	+		42541	26191	28423	28436	48276	48276					0.022132292089509065
PPPLAKAI	8	Unmodified	_PPPLAKAI_					0	0	0		ENST00000586588.5_1_19:10244345-10254710:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1;ENST00000588913.5_1_19:10244345-10246231:-|nuORF	ENST00000586588.5_1_19:10244345-10254710:-|nuORF	ENST00000586588.5_1_19:10244345-10254710:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.7239685058594	2	403.760364	805.506175	-1.8567	-0.00074967	4.0184	0.0016225	2.1617	0.00087281	403.76163514076666	65.015	0.40631	65.141	64.77	65.177	0.12545					21	14	2	0	0	0	0.4196	1	5709	5709		46.766	9.738	1	179670			42542	3689	28424	28437	48277	48277					0.0956419559937558
PPPLAKAI	8	Unmodified	_PPPLAKAI_					0	0	0		ENST00000586588.5_1_19:10244345-10254710:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1;ENST00000588913.5_1_19:10244345-10246231:-|nuORF	ENST00000586588.5_1_19:10244345-10254710:-|nuORF	ENST00000586588.5_1_19:10244345-10254710:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	403.760364	805.506175	-0.39151	-0.00015808	2.6586	0.0010734	2.267	0.00091534	403.76080218153453	65.345	0.073303	65.31	65.252	65.325	-0.034798	0.084443	-0.0007274	NaN	46.766	4	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47072			42543	3689	28424	28437							0.0956419559937558
PPPLHSIPN	9	Unmodified	_PPPLHSIPN_					0	0	0		ENSG00000176571|ENST00000518476|CNBD1	ENSG00000176571|ENST00000518476|CNBD1	ENSG00000176571|ENST00000518476|CNBD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.26702880859375	2	486.269084	970.523616	0.080189	3.8993E-05	-4.2741	-0.0020783	-4.1939	-0.0020393	486.2668793256364	86.146	4.4086	86.59	84.867	89.275	0.44331					281	107	4	0	0	0	0.72402	1	10031	10031		38.806	3.6541	1	1279400			42544	7089	28425	28438	48278	48278					0.037174911343640815
PPPLIRPAN	9	Unmodified	_PPPLIRPAN_					0	0	0		ENST00000526255.1_1_1:211485798-211487107:+|nuORF;nc|ENSG00000117625|Q9P2K3|RCOR3;ENSG00000117625|ENST00000419091|RCOR3	ENST00000526255.1_1_1:211485798-211487107:+|nuORF	ENST00000526255.1_1_1:211485798-211487107:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7909240722656	2	487.792727	973.5709	-0.48923	-0.00023864	-3.7823	-0.001845	-4.2716	-0.0020836	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.72402	1	9676	9676		38.806	3.1879	1	1599600			42545	2992	28426	28439	48279	48279					0.0830577040536582
PPPLLLLL	8	Unmodified	_PPPLLLLL_					0	0	0		nc|ENSG00000122642|O95302-3|FKBP9;ENSG00000122642|ENST00000242209|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF;ENST00000371558.6_1_X:118708567-118708919:+|nuORF;nc|ENSG00000173706|Q9ULI3-2|HEG1;ENSG00000121316|ENST00000240617|PLBD1;ENSG00000177707|ENST00000485303|NECTIN3;ENST00000466324.1_1_11:64444212-64481216:-|nuORF;nc|ENSG00000154447|Q7Z6J0-3|SH3RF1;ENST00000594859.5_1_19:18723732-18728463:+|nuORF;nc|ENSG00000177707|Q9NQS3-2|NECTIN3;ENSG00000105696|ENST00000262817|TMEM59L;ENST00000598660.1_1_19:18723732-18729158:+|nuORF;ENST00000462274.1_1_21:38739279-38845117:+|nuORF;ENST00000469202.5_1_7:32997059-33014827:+|nuORF;ENST00000379565.7_1_X:20227482-20284914:-|nuORF;ENSG00000173706|ENST00000311127|HEG1;ENSG00000143126|ENST00000271332|CELSR2;ENSG00000105088|ENST00000264833|OLFM2;ENSG00000110076|ENST00000265459|NRXN2;nc|ENSG00000110076|Q9P2S2-2|NRXN2;ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000163785|P34925-2|RYK;ENSG00000163785|ENST00000623711|RYK;ENSG00000243449|ENST00000409248|C4orf48;nc|ENSG00000243449|Q5BLP8-3|NICOL1;nc|ENSG00000243449|Q5BLP8-2|NICOL1	nc|ENSG00000122642|O95302-3|FKBP9;ENSG00000143126|ENST00000271332|CELSR2;REV__ENSG00000143126|ENST00000271332|CELSR2;ENSG00000105088|ENST00000264833|OLFM2;ENSG00000110076|ENST00000265459|NRXN2;REV__nc|ENSG00000001036|Q9BTY2-2|FUCA2;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;ENSG00000121904|ENST00000373381|CSMD2;REV__ENSG00000087116|ENST00000251582|ADAMTS2;nc|ENSG00000163785|P34925-2|RYK;REV__ENSG00000274209|ENST00000620264|ANTXRL;ENSG00000243449|ENST00000409248|C4orf48;REV__ENSG00000161638|ENST00000293379|ITGA5;REV__ENSG00000185803|ENST00000643944|SLC52A2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2633056640625	2	438.301865	874.589176	-1.584	-0.00069428	-0.66589	-0.00029186	-2.2499	-0.00098614	438.2994752666333	35.452	0.21373	35.483	35.366	35.58	0.031132					8	5	2	0	0	0	0.4196	1	1874	1874		5.0869	0	1	21096			42546	4602;3201;5862;3236;19771;2508;16924;2184;16038;26278;23997;8807;20770;22794	28427	28440	48280	48280					0.14686512327375567
PPPLLLVV	8	Unmodified	_PPPLLLVV_					0	0	0		ENST00000430375.1_1_3:190946511-190947557:-|nuORF	ENST00000430375.1_1_3:190946511-190947557:-|nuORF	ENST00000430375.1_1_3:190946511-190947557:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.3066711425781	2	424.286214	846.557876	2.1582	0.00091572	-4.3808	-0.0018587	-2.2225	-0.00094299	424.2843505123245	26.678	0.27222	26.337	26.186	26.458	-0.34035					8	5	2	0	0	0	0.4196	1	1500	1500		5.0869	0	1	30277			42547	11633	28428	28441	48281	48281					0.12845939293276842
PPPLLMPPI	9	Unmodified	_PPPLLMPPI_					0	0	0			REV__nc|ENSG00000196388|Q0VD86-2|INCA1	REV__nc|ENSG00000196388|Q0VD86-2|INCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7906494140625	2	487.790807	973.56706	-1.5393	-0.00075085	1.1332	0.00055277	-0.40607	-0.00019808	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.72098	1	8079	8079		39.021	5.5285	1	1760400	+		42548	30130	28429	28442	48282	48282					0.07921964587285402
PPPLLPPLLRP	11	Unmodified	_PPPLLPPLLRP_					0	0	0		ENST00000341184.6_1_22:39853433-39883480:+|nuORF	ENST00000341184.6_1_22:39853433-39883480:+|nuORF	ENST00000341184.6_1_22:39853433-39883480:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9296875	3	403.928781	1208.76451	2.3249	0.0009391	-0.14576	-5.8878E-05	2.1792	0.00088023	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.78683	1	3904	3904		14.086	0	1	2948200			42549	10242	28430	28443	48283	48283					0.16848307121586004
PPPLLPTV	8	Unmodified	_PPPLLPTV_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.2585754394531	2	417.260197	832.50584	-2.1518	-0.00089787	-1.6828	-0.00070218	-3.8346	-0.0016	417.25934690137603	21.231	2.6146	21.231	20.572	23.187	0					203	120	3	0	0	0	0.81548	1	565	565		20.482	0	1	250530			42550	2943	28431	28444	48284	48284					0.08288775879509558
PPPLPRSRR	9	Unmodified	_PPPLPRSRR_					0	0	0			REV__ENST00000599172.2_1_9:131938181-131938688:+|nuORF	REV__ENST00000599172.2_1_9:131938181-131938688:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3271484375	2	538.327799	1074.64105	-1.4902	-0.00080221	0.37298	0.00020079	-1.1172	-0.00060142	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12637	12637		25.45	1.2474	1	4041000	+		42551	29293	28432	28445	48285	48285					0.1067106879381754
PPPLSLAPLW	10	Unmodified	_PPPLSLAPLW_					0	0	0		ENST00000300853.7_1_19:45912205-45912715:-|nuORF	ENST00000300853.7_1_19:45912205-45912715:-|nuORF	ENST00000300853.7_1_19:45912205-45912715:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3168334960938	2	545.81841	1089.62227	2.5542	0.0013941	-3.0434	-0.0016611	-0.48916	-0.00026699	545.8167946929442	93.574	1.2997	93.512	93.008	94.307	-0.061432					69	30	3	0	0	0	0.37624	1	9925	9925		21.96	0	1	484130			42552	9799	28433	28446	48286	48286					0.08104094379405069
PPPLTGVPQTP	11	Unmodified	_PPPLTGVPQTP_					0	0	0			REV__ENST00000531503.5_1_11:65603108-65617212:+|nuORF	REV__ENST00000531503.5_1_11:65603108-65617212:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3060913085938	2	552.308406	1102.60226	-0.70613	-0.00039	-2.9091	-0.0016067	-3.6153	-0.0019967	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.51007	1	9630	9630		51.193	1.6567	1	1609500	+		42553	28171	28434	28447	48287	48287					0.055062986488110255
PPPLVPHGSA	10	Unmodified	_PPPLVPHGSA_					0	0	0			REV__ENST00000377897.8_1_11:62574741-62574918:-|nuORF	REV__ENST00000377897.8_1_11:62574741-62574918:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.26708984375	2	486.269084	970.523616	-1.0289	-0.00050034	-2.8077	-0.0013653	-3.8366	-0.0018656	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.84112	1	8366	8366		37.159	3.2375	1	1182200	+		42554	25877	28435	28448	48288	48288					0.037174911343640815
PPPMEHAQM	9	Oxidation (M)	_PPPMEHAQM(Oxidation (M))_		PPPMEHAQM(1)		PPPM(-57)EHAQM(57)	0	0	1		nc|ENSG00000084093|Q13127-4|REST;ENSG00000084093|ENST00000309042|REST	nc|ENSG00000084093|Q13127-4|REST	nc|ENSG00000084093|Q13127-4|REST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.2277221679688	2	527.228245	1052.44194	1.5744	0.00083009	1.4529	0.00076604	3.0274	0.0015961	527.2289853109975	89.943	0.64899	90.394	90.255	90.904	0.45058					29	16	2	0	0	0	0.35373	1	10635	10635		60.972	6.2073	2	1029900			42555	1512	28436	28449	48289	48289		30			-0.0821869561141284
PPPMLPMLP	9	Unmodified	_PPPMLPMLP_					0	0	0			REV__ENSG00000185294|ENST00000329196|SPPL2C	REV__ENSG00000185294|ENST00000329196|SPPL2C	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	496.7669982910156	2	496.769017	991.523481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.257	1	77.382	76.882	77.882	0.12485								0	0	0	0.30219	1	7249	7249		29.842	0.69198	1		+		42556	22757	28437	28450	48290	48290					0.027380318185123542
PPPPAHAL	8	Unmodified	_PPPPAHAL_					0	0	0		ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12;ENSG00000179862|ENST00000372638|CITED4	ENSG00000126464|ENST00000418929|PRR12	ENSG00000126464|ENST00000418929|PRR12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.2281799316406	2	400.226688	798.438824	0.31926	0.00012778	4.1334	0.0016543	4.4527	0.0017821	400.2284187459368	54.769	2.6558	54.861	53.242	55.898	0.091167					119	74	2	0	0	0	0.80127	2	4565	4536;4565		24.504	6.5202	1	1143300			42557	3455	28438	28451	48291;48292	48292					0.03154165388400543
PPPPALASG	9	Unmodified	_PPPPALASG_					0	0	0			REV__ENST00000490187.1_1_20:25205760-25206148:+|nuORF	REV__ENST00000490187.1_1_20:25205760-25206148:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.7236328125	2	403.723978	805.433404	0.40958	0.00016536	-0.076812	-3.1011E-05	0.33277	0.00013435	403.72380872064997	64.881	1.7093	65.005	63.854	65.563	0.12396					144	69	3	0	0	0	0.62081	1	5769	5769		45.952	1.8352	1	1091100	+		42558	27633	28439	28452	48293	48293					0.022904418059511045
PPPPALASG	9	Unmodified	_PPPPALASG_					0	0	0			REV__ENST00000490187.1_1_20:25205760-25206148:+|nuORF	REV__ENST00000490187.1_1_20:25205760-25206148:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.7236633300781	2	403.723978	805.433404	-1.1089	-0.00044771	1.5518	0.00062651	0.44287	0.0001788	403.7244510631445	64.933	1.6766	64.971	63.905	65.582	0.037849					135	64	4	0	0	0	0.72402	1	5785	5785		38.806	0	1	1390300	+		42559	27633	28439	28452	48294	48294					0.022904418059511045
PPPPAPASGG	10	Unmodified	_PPPPAPASGG_					0	0	0			REV__ENSG00000160460|ENST00000598249|SPTBN4	REV__ENSG00000160460|ENST00000598249|SPTBN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.2183837890625	2	424.21906	846.423567	-0.1837	-7.7928E-05	-1.1351	-0.00048152	-1.3188	-0.00055944	424.2185287134354	101.66	1.8082	101.68	101.04	102.85	0.01989					87	43	4	0	0	0	0.84112	2	10876	10876;10888		37.159	4.3467	1	1878300	+		42560	20721	28440	28453	48295;48296	48295					-0.005787461994259502
PPPPAPASGG	10	Unmodified	_PPPPAPASGG_					0	0	0			REV__ENSG00000160460|ENST00000598249|SPTBN4	REV__ENSG00000160460|ENST00000598249|SPTBN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.21832275390625	2	424.21906	846.423567	2.6374	0.0011188	-3.9582	-0.0016792	-1.3209	-0.00056033	424.21733183456104	101.6	1.8618	101.55	100.84	102.7	-0.049828					92	44	4	0	0	0	0.67608	4	11067	11023;11067;11080;11092		45.952	10.751	1	2292700	+		42561	20721	28440	28453	48297;48298;48299;48300	48298					-0.005787461994259502
PPPPAPASGG	10	Unmodified	_PPPPAPASGG_					0	0	0			REV__ENSG00000160460|ENST00000598249|SPTBN4	REV__ENSG00000160460|ENST00000598249|SPTBN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.21832275390625	2	424.21906	846.423567	2.8621	0.0012142	-4.1607	-0.001765	-1.2985	-0.00055086	424.2172299005605	101.48	1.8959	101.53	100.85	102.75	0.044823					89	45	3	0	0	0	0.71042	3	10931	10931;10979;10991		44.117	6.9577	1	2047000	+		42562	20721	28440	28453	48301;48302;48303	48301					-0.005787461994259502
PPPPAPASGG	10	Unmodified	_PPPPAPASGG_					0	0	0			REV__ENSG00000160460|ENST00000598249|SPTBN4	REV__ENSG00000160460|ENST00000598249|SPTBN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.2187194824219	2	424.21906	846.423567	-1.7078	-0.00072449	0.68599	0.00029101	-1.0218	-0.00043348	424.2192991334227	101.86	1.3095	102.06	101.54	102.85	0.19484					57	31	2	0	0	0	0.86452	2	10675	10675;10700		30.504	5.0535	1	1022300	+		42563	20721	28440	28453	48304;48305	48304					-0.005787461994259502
PPPPAPNSA	9	Unmodified	_PPPPAPNSA_					0	0	0			REV__ENST00000508973.5_1_5:21473671-21473779:+|nuORF	REV__ENST00000508973.5_1_5:21473671-21473779:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.21875	2	424.21906	846.423567	2.6374	0.0011188	-3.9582	-0.0016792	-1.3209	-0.00056033	424.21733183456104	101.6	1.8618	101.55	100.84	102.7	-0.049828					92	44	4	0	0	0	0.78536	1	11055	11055		29.15	0.89528	1	2292700	+		42564	27936	28441	28454	48306	48306					-0.005787461994373189
PPPPAPNSA	9	Unmodified	_PPPPAPNSA_					0	0	0			REV__ENST00000508973.5_1_5:21473671-21473779:+|nuORF	REV__ENST00000508973.5_1_5:21473671-21473779:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.21881103515625	2	424.21906	846.423567	2.5012	0.0010611	-3.4581	-0.001467	-0.95693	-0.00040595	424.2174916440496	100.89	0.85032	101.24	100.69	101.54	0.34591					53	21	4	0	0	0	0.74721	1	12272	12272		37.159	6.6555	1	1130200	+		42565	27936	28441	28454	48307	48307					-0.005787461994373189
PPPPCFDEN	9	Unmodified	_PPPPCFDEN_					0	0	0			REV__ENSG00000188419|ENST00000357749|CHM	REV__ENSG00000188419|ENST00000357749|CHM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.80181884765625	2	508.213117	1014.41168	0.67514	0.00034311	-1.9102	-0.00097079	-1.2351	-0.00062768	508.2119993982068	19.291	0.41058	18.821	18.609	19.019	-0.46967					11	8	2	0	0	0	0.20789	1	508	508		11.511	0	1	14543	+		42566	23002	28442	28455	48308	48308					-0.09494731004940604
PPPPGHLR	8	Unmodified	_PPPPGHLR_					0	0	0			REV__ENST00000495607.5_1_22:50751505-50752324:-|nuORF	REV__ENST00000495607.5_1_22:50751505-50752324:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.75372314453125	2	435.750862	869.487171	1.444	0.00062921	3.3092	0.001442	4.7532	0.0020712	435.75235603022185	76.973	2.779	77.021	75.589	78.368	0.047981					162	108	2	0	0	0	0.80963	1	7417	7417		15.636	0.97212	1	380890	+		42567	27740	28443	28456	48309	48309					0.047206590283281
PPPPGPGAAS	10	Unmodified	_PPPPGPGAAS_					0	0	0		nc|ENSG00000157152|Q92777-2|SYN2;ENSG00000157152|ENST00000621198|SYN2	nc|ENSG00000157152|Q92777-2|SYN2	nc|ENSG00000157152|Q92777-2|SYN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	424.2183837890625	2	424.21906	846.423567	-0.98932	-0.00041969	0.0014772	6.2667E-07	-0.98784	-0.00041906	424.2189731189245	101.17	1.7059	101.17	100.51	102.21	0					61	40	2	0	0	0	0.84112	1	10283	10283		37.159	5.2042	1	607460			42568	15020	28444	28457	48310	48310					-0.005787461994259502
PPPPGQPN	8	Unmodified	_PPPPGQPN_					0	0	0			REV__ENSG00000251655|ENST00000500254|PRB1	REV__ENSG00000251655|ENST00000500254|PRB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	402.2050476074219	2	402.205953	802.397353	-1.0356	-0.00041653	0.5047	0.00020299	-0.53091	-0.00021354	402.2060768778475	98.029	2.4948	98.029	96.767	99.262	0					118	59	3	0	0	0	0.88915	1	9846	9846		35.201	0	1	480830	+		42569	23874	28445	28458	48311	48311					-0.01175015370915844
PPPPGTPGRL	10	Unmodified	_PPPPGTPGRL_					0	0	0		ENST00000487852.1_1_13:33590814-33628082:+|nuORF	ENST00000487852.1_1_13:33590814-33628082:+|nuORF	ENST00000487852.1_1_13:33590814-33628082:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.78118896484375	2	494.782359	987.550165	-0.60063	-0.00029718	-3.4065	-0.0016855	-4.0071	-0.0019826	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.74274	1	8342	8342		42.396	6.7778	1	707910			42570	12609	28446	28459	48312	48312					0.05589180025708629
PPPPGTPGRL	10	Unmodified	_PPPPGTPGRL_					0	0	0		ENST00000487852.1_1_13:33590814-33628082:+|nuORF	ENST00000487852.1_1_13:33590814-33628082:+|nuORF	ENST00000487852.1_1_13:33590814-33628082:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7799377441406	2	494.782359	987.550165	-1.5759	-0.00077971	-2.3488	-0.0011622	-3.9247	-0.0019419	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.85934	1	8358	8358		35.618	1.4457	1	569520			42571	12609	28446	28459	48313	48313					0.05589180025708629
PPPPGTQL	8	Unmodified	_PPPPGTQL_					0	0	0		ENSG00000187017|ENST00000645284|ESPN	ENSG00000187017|ENST00000645284|ESPN	ENSG00000187017|ENST00000645284|ESPN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.7240905761719	2	403.723978	805.433404	-1.8572	-0.00074981	2.1457	0.00086627	0.28846	0.00011646	403.7247227583041	64.772	1.8283	64.897	63.712	65.54	0.12545					133	73	3	0	0	0	0.90465	1	5743	5743		40.573	3.4135	1	1035700			42572	7834	28447	28460	48314	48314					0.022904418059511045
PPPPGTQL	8	Unmodified	_PPPPGTQL_					0	0	0		ENSG00000187017|ENST00000645284|ESPN	ENSG00000187017|ENST00000645284|ESPN	ENSG00000187017|ENST00000645284|ESPN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.7239685058594	2	403.723978	805.433404	-1.1089	-0.00044771	1.5518	0.00062651	0.44287	0.0001788	403.7244510631445	64.933	1.6766	64.971	63.905	65.582	0.037849					135	64	4	0	0	0	0.47906	1	5737	5737		76.847	11.043	1	1390300			42573	7834	28447	28460	48315	48315					0.022904418059511045
PPPPKTPN	8	Unmodified	_PPPPKTPN_					0	0	0		nc|ENSG00000117322|P20023-2|CR2;nc|ENSG00000117322|P20023|CR2;nc|ENSG00000117322|P20023-4|CR2;ENSG00000117322|ENST00000367057|CR2	nc|ENSG00000117322|P20023-2|CR2	nc|ENSG00000117322|P20023-2|CR2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	423.59759521484375	2	424.237253	846.459953	-0.96192	-0.00040808	-2.6285	-0.0011151	-3.5904	-0.0015232	424.23825193955497	105.37	1.1863	105.37	104.83	106.01	0					35	27	2	0	0	0	0.4196	1	10971	10971		24.203	9.5387	1	42704			42574	2971	28448	28461	48316	48316					0.03058130697274919
PPPPPAKK	8	Unmodified	_PPPPPAKK_					0	0	0		ENSG00000011451|ENST00000673675|WIZ;nc|ENSG00000011451|O95785-3|WIZ	ENSG00000011451|ENST00000673675|WIZ;REV__nc|ENSG00000148396|O15027-4|SEC16A	ENSG00000011451|ENST00000673675|WIZ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.80908203125	2	416.257988	830.501424	0.19748	8.2204E-05	-4.4779	-0.001864	-4.2804	-0.0017818	416.2559906541714	18.922	0.55983	18.292	18.06	18.62	-0.62961					22	12	3	0	0	0	0.4196	1	490	490		35.201	6.0512	1	205050			42575	793;20115	28449	28462	48317	48317					0.07939311456607356
PPPPPLGAPP	10	Unmodified	_PPPPPLGAPP_					0	0	0		ENSG00000122574|ENST00000242140|WIPF3	ENSG00000122574|ENST00000242140|WIPF3	ENSG00000122574|ENST00000242140|WIPF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7660827636719	2	470.268553	938.522553	-0.26943	-0.0001267	-3.9584	-0.0018615	-4.2279	-0.0019882	470.26640034819826	28.4	0.66664	28.36	27.974	28.641	-0.039906					29	15	3	0	0	0	0.86786	1	1441	1441		26.796	0	1	38597			42576	3233	28450	28463	48318	48318					0.05083276765458322
PPPPPLGAPP	10	Unmodified	_PPPPPLGAPP_					0	0	0		ENSG00000122574|ENST00000242140|WIPF3	ENSG00000122574|ENST00000242140|WIPF3	ENSG00000122574|ENST00000242140|WIPF3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	470.268553	938.522553	0.37091	0.00017443	-4.7415	-0.0022298	-4.3706	-0.0020554	470.2661987468173	28.409	0.36235	28.445	28.255	28.618	0.03607	-0.0010039	-0.00048709	NaN	26.796	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26907			42577	3233	28450	28463							0.05083276765458322
PPPPPLGAPP	10	Unmodified	_PPPPPLGAPP_					0	0	0		ENSG00000122574|ENST00000242140|WIPF3	ENSG00000122574|ENST00000242140|WIPF3	ENSG00000122574|ENST00000242140|WIPF3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	470.268553	938.522553	-0.31868	-0.00014986	-3.8483	-0.0018097	-4.167	-0.0019596	470.26660540277726	28.552	0.5811	28.533	28.215	28.796	-0.019407	0.086966	0.00035299	NaN	26.796	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39046			42578	3233	28450	28463							0.05083276765458322
PPPPPPRSI	9	Unmodified	_PPPPPPRSI_					0	0	0		ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	ENST00000554659.5_1_14:68129237-68141235:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2777099609375	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.77244	1	8381	8381		32.812	4.9302	1	7438100			42579	13724	28451	28464	48319	48319					0.0643408151404401
PPPPPWPL	8	Unmodified	_PPPPPWPL_					0	0	0		ENST00000269389.7_1_17:80285027-80291704:-|nuORF	ENST00000269389.7_1_17:80285027-80291704:-|nuORF	ENST00000269389.7_1_17:80285027-80291704:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7548828125	2	450.752539	899.490525	-0.14135	-6.3713E-05	3.8471	0.0017341	3.7058	0.0016704	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.91333	1	7903	7903		43.626	10.133	1	337080			42580	9547	28452	28465	48320	48320					0.03675909082312501
PPPPQQGARR	10	Unmodified	_PPPPQQGARR_					0	0	0			REV__nc|ENSG00000175556|Q496Y0-3|LONRF3	REV__nc|ENSG00000175556|Q496Y0-3|LONRF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3062744140625	2	552.307064	1102.59957	-0.70613	-0.00039	-0.47813	-0.00026407	-1.1843	-0.00065407	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.77314	1	9604	9604		40.778	5.6261	1	1609500	+		42581	22072	28453	28466	48321	48321					0.052378880345031575
PPPPQQGARR	10	Unmodified	_PPPPQQGARR_					0	0	0			REV__nc|ENSG00000175556|Q496Y0-3|LONRF3	REV__nc|ENSG00000175556|Q496Y0-3|LONRF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3065185546875	2	552.307064	1102.59957	0.78014	0.00043088	-1.9577	-0.0010812	-1.1775	-0.00065035	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.86589	1	9322	9322		29.15	2.4566	1	1841700	+		42582	22072	28453	28466	48322	48322					0.052378880345031575
PPPPSILHTT	10	Unmodified	_PPPPSILHTT_					0	0	0			REV__ENST00000577226.5_1_17:27233817-27234084:-|nuORF	REV__ENST00000577226.5_1_17:27233817-27234084:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2932739257812	2	530.295299	1058.57605	-0.73575	-0.00039016	-2.8196	-0.0014952	-3.5553	-0.0018854	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.86452	1	8775	8775		30.504	0.18592	1	1390700	+		42583	29002	28454	28467	48323	48323					0.04910029477309763
PPPPSILHTT	10	Unmodified	_PPPPSILHTT_					0	0	0			REV__ENST00000577226.5_1_17:27233817-27234084:-|nuORF	REV__ENST00000577226.5_1_17:27233817-27234084:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2933349609375	2	530.295299	1058.57605	-1.2396	-0.00065735	-2.6354	-0.0013976	-3.875	-0.0020549	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.46422	1	10722	10722		58.782	20.97	1	1818700	+		42584	29002	28454	28467	48324	48324					0.04910029477309763
PPPPSYIV	8	Unmodified	_PPPPSYIV_					0	0	0			REV__ENST00000494371.5_1_1:230807261-230814859:+|nuORF	REV__ENST00000494371.5_1_1:230807261-230814859:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.23870849609375	2	435.242004	868.469455	-1.6533	-0.00071961	-2.42	-0.0010533	-4.0733	-0.0017729	435.240689021295	28.601	0.50809	28.67	28.42	28.928	0.06868					58	25	4	0	0	0	0.884	1	1178	1178		33.516	6.7195	1	211980	+		42585	27717	28455	28468	48325	48325					0.029958989828060112
PPPPYGPGRIP	11	Unmodified	_PPPPYGPGRIP_					0	0	0		ENSG00000171201|ENST00000304915|SMR3B	ENSG00000171201|ENST00000304915|SMR3B	ENSG00000171201|ENST00000304915|SMR3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3179321289062	2	574.316566	1146.61858	0.81882	0.00047026	4.2826	0.0024596	5.1014	0.0029298	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.67493	1	9815	9815		35.618	0	1	1866200			42586	6645	28456	28469	48326	48326					0.05113424605565342
PPPQGGPPG	9	Unmodified	_PPPQGGPPG_					0	0	0		ENST00000532096.1_1_11:614111-615490:-|nuORF;nc|ENSG00000185507|Q92985-2|IRF7;ENSG00000185507|ENST00000525445|IRF7;nc|ENSG00000185507|Q92985-4|IRF7	ENST00000532096.1_1_11:614111-615490:-|nuORF	ENST00000532096.1_1_11:614111-615490:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.20526123046875	2	402.205953	802.397353	2.7629	0.0011112	-3.5306	-0.00142	-0.76772	-0.00030878	402.20451588994206	98.39	0.9756	98.751	98.317	99.293	0.36136					52	23	3	0	0	0	0.39977	1	11858	11858		57.811	3.0466	1	832840			42587	7719	28457	28470	48327	48327					-0.011750153709044753
PPPRARGG	8	Unmodified	_PPPRARGG_					0	0	0			REV__ENST00000497866.5_1_1:44444922-44446927:+|nuORF	REV__ENST00000497866.5_1_1:44444922-44446927:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2327575683594	2	404.232836	806.45112	-1.8251	-0.00073778	2.1907	0.00088553	0.3655	0.00014775	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.9159	1	8293	8293		44.531	7.5026	1	3315300	+		42588	27778	28458	28471	48328	48328					0.040152018514731935
PPPRATRLPPP	11	Unmodified	_PPPRATRLPPP_					0	0	0		ENSG00000047648|ENST00000337414|ARHGAP6;nc|ENSG00000047648|O43182-2|ARHGAP6;nc|ENSG00000047648|O43182-3|ARHGAP6;ENST00000489330.6_1_X:11166772-11683098:-|nuORF	ENSG00000047648|ENST00000337414|ARHGAP6	ENSG00000047648|ENST00000337414|ARHGAP6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.23883056640625	3	400.240018	1197.69823	0.049152	1.9673E-05	-2.1438	-0.00085803	-2.0946	-0.00083836	400.23915201390855	18.098	0.50438	17.477	17.308	17.813	-0.62141					17	10	2	0	0	0	0.72739	1	354	354		27.047	5.2669	1	290130			42589	967	28459	28472	48329	48329					0.1072849127954214
PPPRGGDL	8	Unmodified	_PPPRGGDL_					0	0	0		nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK;ENSG00000165119|ENST00000376263|HNRNPK	nc|ENSG00000165119|P61978-3|HNRNPK	nc|ENSG00000165119|P61978-3|HNRNPK	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.7181396484375	2	404.719227	807.423902	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.966	1	74.966	74.466	75.466	0								0	0	0	0.29755	1	6775	6775		24.203	1.166	1				42590	6049	28460	28473	48330	48330					0.012486735204333854
PPPRKAVLSM	10	Unmodified	_PPPRKAVLSM_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;nc|ENSG00000160305|Q14689-3|DIP2A;nc|ENSG00000160305|Q14689-2|DIP2A;nc|ENSG00000160305|Q14689-4|DIP2A;nc|ENSG00000160305|Q14689-5|DIP2A;ENST00000494435.5_1_21:47924311-47965916:+|nuORF;ENST00000480553.1_1_21:47959692-47966956:+|nuORF	nc|ENSG00000160305|Q14689-6|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.3181762695312	2	548.320794	1094.62703	-1.4577	-0.00079929	-3.0131	-0.0016522	-4.4708	-0.0024514	548.3191616611949	109.53	0.29981	109.54	109.38	109.68	0.0060425					26	15	2	0	0	0	0.85466	1	11676	11676		20.947	0.95016	1	1003800			42591	5578	28461	28474	48331	48331					0.08350655250524142
PPPRKVLILG	10	Unmodified	_PPPRKVLILG_					0	0	0		ENSG00000084774|ENST00000264705|CAD	ENSG00000084774|ENST00000264705|CAD	ENSG00000084774|ENST00000264705|CAD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167724609375	2	545.360776	1088.707	0.15305	8.3465E-05	-4.4846	-0.0024457	-4.3316	-0.0023623	545.3584914183244	89.899	0.21365	90.112	89.998	90.211	0.21271					6	4	2	0	0	0	0.37624	1	8998	8998		29.15	7.1897	1	23538			42592	1526	28462	28475	48332	48332					0.1661946491603885
PPPRPISPP	9	Unmodified	_PPPRPISPP_					0	0	0		ENSG00000169855|ENST00000464233|ROBO1;nc|ENSG00000169855|Q9Y6N7-2|ROBO1;nc|ENSG00000169855|Q9Y6N7-6|ROBO1;nc|ENSG00000169855|Q9Y6N7-5|ROBO1;nc|ENSG00000169855|Q9Y6N7-4|ROBO1;nc|ENSG00000169855|Q9Y6N7-3|ROBO1	ENSG00000169855|ENST00000464233|ROBO1	ENSG00000169855|ENST00000464233|ROBO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2777099609375	2	479.279452	956.544351	-1.1288	-0.000541	-3.1146	-0.0014928	-4.2434	-0.0020338	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.76255	1	7808	7808		35.618	0	1	1311100			42593	6529	28463	28476	48333	48333					0.0643408151404401
PPPRRAAS	8	Unmodified	_PPPRRAAS_					0	0	0			REV__ENST00000312521.8_1_3:23986755-23987076:+|nuORF	REV__ENST00000312521.8_1_3:23986755-23987076:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.24658203125	2	426.245944	850.477334	2.6022	0.0011092	-2.3558	-0.0010042	0.24641	0.00010503	426.2448505635507	87.493	3.3011	87.546	86.187	89.488	0.053024					131	77	2	0	0	0	0.85277	1	8901	8901		25.45	0	1	4266000	+		42594	24915	28464	28477	48334	48334					0.0461147102294035
PPPRRRPGL	9	Unmodified	_PPPRRRPGL_					0	0	0		ENST00000309575.4_1_3:142839506-142839656:+|nuORF	ENST00000309575.4_1_3:142839506-142839656:+|nuORF	ENST00000309575.4_1_3:142839506-142839656:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035888671875	2	523.322517	1044.63048	-1.5391	-0.00080542	4.3542	0.0022787	2.8152	0.0014732	523.3243479863468	87.978	0.33403	88.148	88.041	88.375	0.16923					9	7	2	0	0	0	0.20789	1	8667	8667		30.504	0	1	70347			42595	9899	28465	28478	48335	48335					0.1099508613940543
PPPRTFVN	8	Unmodified	_PPPRTFVN_					0	0	0			REV__ENST00000435485.5_1_9:109262681-109320839:+|nuORF	REV__ENST00000435485.5_1_9:109262681-109320839:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2548828125	2	464.255977	926.497401	-1.0566	-0.00049054	-3.1539	-0.0014642	-4.2105	-0.0019547	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.87922	1	8341	8341		31.955	0	1	1603800	+		42596	26675	28466	28479	48336	48336					0.03121221962896925
PPPSLLLLLL	10	Unmodified	_PPPSLLLLLL_					0	0	0		nc|ENSG00000116260|O00391-2|QSOX1;ENSG00000116260|ENST00000367602|QSOX1	REV__ENSG00000198753|ENST00000361971|PLXNB3;ENSG00000116260|ENST00000367602|QSOX1	REV__ENSG00000198753|ENST00000361971|PLXNB3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3270874023438	2	538.359911	1074.70527	1.3384	0.00072053	4.0168	0.0021625	5.3552	0.002883	538.3616390577694	100.55	0.2831	100.85	100.61	100.89	0.2999					8	6	2	0	0	0	0.37624	1	12161	12161		2.9294	0	1	40219			42597	23374;2912	28467	28480	48337	48337					0.1709041110743783
PPPSNRFL	8	Unmodified	_PPPSNRFL_					0	0	0		ENSG00000100934|ENST00000307712|SEC23A;nc|ENSG00000100934|Q15436-2|SEC23A	ENSG00000100934|ENST00000307712|SEC23A	ENSG00000100934|ENST00000307712|SEC23A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25360107421875	2	464.255977	926.497401	-1.1813	-0.00054845	-2.9805	-0.0013837	-4.1619	-0.0019322	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.91005	1	7824	7824		42.474	6.8562	1	946850			42598	1886	28468	28481	48338	48338					0.031212219629082938
PPPSPEAM	8	Unmodified	_PPPSPEAM_					0	0	0		ENST00000375663.7_1_6:31747884-31748258:-|nuORF	ENST00000375663.7_1_6:31747884-31748258:-|nuORF	ENST00000375663.7_1_6:31747884-31748258:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.1941223144531	2	413.194196	824.37384	-0.18763	-7.7529E-05	-1.0101	-0.00041736	-1.1977	-0.00049489	413.19367565265276	78.88	3.1143	78.936	78.489	81.603	0.056122					158	90	2	0	0	0	0.86791	1	7678	7678		28.254	0	1	901690			42599	10803	28469	28482	48339	48339					-0.0453719719973833
PPPSPEAM	8	Unmodified	_PPPSPEAM_					0	0	0		ENST00000375663.7_1_6:31747884-31748258:-|nuORF	ENST00000375663.7_1_6:31747884-31748258:-|nuORF	ENST00000375663.7_1_6:31747884-31748258:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.19415283203125	2	413.194196	824.37384	2.9123	0.0012034	-4.0466	-0.001672	-1.1342	-0.00046866	413.192422420302	85.553	2.8893	85.61	84.543	87.432	0.057899					115	66	2	0	0	0	0.91005	1	8694	8694		42.474	0	1	1337900			42600	10803	28469	28482	48340	48340					-0.0453719719973833
PPPSPEAM	8	Unmodified	_PPPSPEAM_					0	0	0		ENST00000375663.7_1_6:31747884-31748258:-|nuORF	ENST00000375663.7_1_6:31747884-31748258:-|nuORF	ENST00000375663.7_1_6:31747884-31748258:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.19427490234375	2	413.194196	824.37384	-1.8226	-0.00075309	-0.058306	-2.4092E-05	-1.8809	-0.00077719	413.1944957204684	85.398	2.5334	85.557	84.502	87.035	0.15851					179	58	5	0	0	0	0.884	1	8303	8303		33.516	3.674	1	1598500			42601	10803	28469	28482	48341	48341					-0.0453719719973833
PPPSPEAM	8	Unmodified	_PPPSPEAM_					0	0	0		ENST00000375663.7_1_6:31747884-31748258:-|nuORF	ENST00000375663.7_1_6:31747884-31748258:-|nuORF	ENST00000375663.7_1_6:31747884-31748258:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1937255859375	2	413.194196	824.37384	0.80605	0.00033306	-2.5244	-0.0010431	-1.7183	-0.00071	413.1932379055747	78.047	2.9824	78.452	77.977	80.959	0.4053					181	70	5	0	0	0	0.86791	2	8954	8882;8954		42.474	5.446	1	5554900			42602	10803	28469	28482	48342;48343	48343					-0.0453719719973833
PPPSPEAM	8	Unmodified	_PPPSPEAM_					0	0	0		ENST00000375663.7_1_6:31747884-31748258:-|nuORF	ENST00000375663.7_1_6:31747884-31748258:-|nuORF	ENST00000375663.7_1_6:31747884-31748258:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1934814453125	2	413.194196	824.37384	-0.086313	-3.5664E-05	-2.3678	-0.00097836	-2.4541	-0.001014	413.1936016248627	77.941	2.7232	78.504	78.093	80.816	0.56332					177	64	5	0	0	0	0.88915	2	8886	8886;8932		35.201	5.3592	1	6380300			42603	10803	28469	28482	48344;48345	48344					-0.0453719719973833
PPPSPLCD	8	Unmodified	_PPPSPLCD_					0	0	0			REV__ENSG00000153930|ENST00000682825|ANKFN1	REV__ENSG00000153930|ENST00000682825|ANKFN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.1942443847656	2	413.194196	824.37384	-0.18723	-7.7364E-05	-0.84764	-0.00035024	-1.0349	-0.0004276	413.1937663511514	85.64	2.721	85.707	84.549	87.27	0.067261					129	62	3	0	0	0	0.89962	1	8614	8614		38.806	5.2906	1	1496400	+		42604	15659	28470	28483	48346	48346					-0.045371971997496985
PPPSPLCD	8	Unmodified	_PPPSPLCD_					0	0	0			REV__ENSG00000153930|ENST00000682825|ANKFN1	REV__ENSG00000153930|ENST00000682825|ANKFN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.19586181640625	2	413.194196	824.37384	-1.8193	-0.00075172	0.10384	4.2906E-05	-1.7155	-0.00070882	413.19449532095985	85.285	2.7275	85.47	84.411	87.139	0.18523					148	63	4	0	0	0	0.87922	1	8357	8357		31.955	5.1588	1	1914300	+		42605	15659	28470	28483	48347	48347					-0.045371971997496985
PPPTAGRR	8	Unmodified	_PPPTAGRR_					0	0	0			REV__chr11:810039-810272|21|39.14|0.91|5.43|+|0|RPLP2,None|1	REV__chr11:810039-810272|21|39.14|0.91|5.43|+|0|RPLP2,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.24609375	2	426.245944	850.477334	1.0559	0.00045007	-0.79439	-0.0003386	0.2615	0.00011146	426.2455229557475	87.647	3.9379	87.573	85.625	89.563	-0.074005					153	92	2	0	0	0	0.85277	1	9089	9089		25.45	1.2474	1	4306400	+		42606	15508	28471	28484	48348	48348					0.046114710229517186
PPPTAGRR	8	Unmodified	_PPPTAGRR_					0	0	0			REV__chr11:810039-810272|21|39.14|0.91|5.43|+|0|RPLP2,None|1	REV__chr11:810039-810272|21|39.14|0.91|5.43|+|0|RPLP2,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.2462463378906	2	426.245944	850.477334	-1.7038	-0.00072625	1.9277	0.00082165	0.22383	9.5406E-05	426.246697883185	87.448	3.9173	87.649	85.72	89.637	0.20114					165	92	2	0	0	0	0.81548	1	8587	8587		20.482	2.1574	1	4015800	+		42607	15508	28471	28484	48349	48349					0.046114710229517186
PPPTLVVL	8	Unmodified	_PPPTLVVL_					0	0	0			REV__nc|ENSG00000107821|Q96I82-2|KAZALD1	REV__nc|ENSG00000107821|Q96I82-2|KAZALD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2660217285156	2	418.268022	834.521491	1.0178	0.00042572	-3.8719	-0.0016195	-2.8541	-0.0011938	418.2662513652403	16.16	0.13271	15.673	15.607	15.739	-0.48718					4	2	2	0	0	0	0.85228	1	100	100		10.185	0.71421	1	29389	+		42608	17676	28472	28485	48350	48350					0.09761062396557918
PPPVKIAWKTA	11	Unmodified	_PPPVKIAWKTA_					0	0	0		nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3;nc|ENSG00000147548|Q9BZ95-3|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3670654296875	2	604.363516	1206.71248	2.3603	0.0014265	2.8185	0.0017034	5.1787	0.0031298	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.75457	1	12917	12917		17.468	0	1	5984800			42609	4909	28473	28486	48351	48351					0.11739143707836774
PPPVLFSI	8	Unmodified	_PPPVLFSI_					0	0	0			REV__ENSG00000166535|ENST00000299698|A2ML1	REV__ENSG00000166535|ENST00000299698|A2ML1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2513427734375	2	435.260197	868.50584	-0.16616	-7.2325E-05	2.661	0.0011582	2.4948	0.0010859	435.2612428805399	79.47	0.25447	79.53	79.297	79.552	0.059349					9	6	2	0	0	0	0.4196	1	7740	7740		20.482	0	1	44924	+		42610	21302	28474	28487	48352	48352					0.06632775879518249
PPPVLPLLFS	10	Unmodified	_PPPVLPLLFS_					0	0	0			REV__ENST00000573487.5_1_16:21169819-21172478:+|nuORF	REV__ENST00000573487.5_1_16:21169819-21172478:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.330322265625	2	540.328611	1078.64267	2.0899	0.0011292	0.85235	0.00046055	2.9423	0.0015898	540.3289675222843	88.709	3.2534	88.637	87.424	90.678	-0.07238					209	76	3	0	0	0	0.86201	1	9224	9224		24.203	0	1	457370	+		42611	28961	28475	28488	48353	48353					0.1064926503922834
PPPVRRPGR	9	Unmodified	_PPPVRRPGR_					0	0	0		nc|ENSG00000196935|Q7Z6B7-2|SRGAP1;ENSG00000196935|ENST00000355086|SRGAP1	nc|ENSG00000196935|Q7Z6B7-2|SRGAP1	nc|ENSG00000196935|Q7Z6B7-2|SRGAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3138427734375	2	516.314692	1030.61483	-1.5618	-0.0008064	-0.1719	-8.8755E-05	-1.7337	-0.00089516	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.7932	1	10582	10582		20.947	0.4651	1	66055000			42612	8116	28476	28489	48354	48354					0.10074799622361752
PPPVRVGPSL	10	Unmodified	_PPPVRVGPSL_					0	0	0			REV__ENST00000359513.8_1_11:46695863-46696103:+|nuORF	REV__ENST00000359513.8_1_11:46695863-46696103:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.803466796875	2	509.805834	1017.59712	0.54005	0.00027532	-4.22	-0.0021514	-3.6799	-0.001876	509.80356957278343	84.302	2.3533	84.749	83.349	85.703	0.44736					134	57	3	0	0	0	0.6116	1	9949	9949		49.442	13.823	1	950450	+		42613	25460	28477	28490	48355	48355					0.08902039576844345
PPQASGLLLH	10	Unmodified	_PPQASGLLLH_					0	0	0		ENSG00000163545|ENST00000367157|NUAK2	ENSG00000163545|ENST00000367157|NUAK2	ENSG00000163545|ENST00000367157|NUAK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7930908203125	2	516.795466	1031.57638	-0.047501	-2.4548E-05	-3.81	-0.001969	-3.8575	-0.0019935	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.85934	1	9067	9067		35.618	7.736	1	692890			42614	5823	28478	28491	48356	48356					0.06185449197187154
PPQDNVSY	8	Unmodified	_PPQDNVSY_					0	0	0			REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.2145080566406	2	460.211432	918.408311	4.3602	0.0020066	2.1173	0.00097442	6.4776	0.002981	460.21235011332533	107.04	0.72292	107.19	106.81	107.53	0.14929					46	22	3	0	0	0	0.85277	2	13090	13077;13090		57.811	20.652	1	1388300	+		42615	15596	28479	28492	48357;48358	48358					-0.054156577872845446
PPQDNVSY	8	Unmodified	_PPQDNVSY_					0	0	0			REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	460.211432	918.408311	-0.92935	-0.0004277	6.9618	0.0032039	6.0325	0.0027762	460.21479212831974	107.29	1.3449	107.29	106.22	107.57	0	0.064382	0.0017587	NaN	57.811	50	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	264220	+		42616	15596	28479	28492							-0.054156577872845446
PPQDNVSY	8	Unmodified	_PPQDNVSY_					0	0	0			REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	460.211432	918.408311	-0.12572	-5.7856E-05	6.3623	0.002928	6.2366	0.0028702	460.2143301073436	107.36	0.62212	107.33	107.04	107.66	-0.034409	0.10162	0.0012069	NaN	57.811	28	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	293560	+		42617	15596	28479	28492							-0.054156577872845446
PPQDNVSY	8	Unmodified	_PPQDNVSY_					0	0	0			REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	460.211432	918.408311	2.7764	0.0012777	3.1715	0.0014596	5.9479	0.0027373	460.2129034109578	107.3	0.62283	107.27	106.97	107.59	-0.034134	0.042534	-0.0017299	NaN	57.811	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	357430	+		42618	15596	28479	28492							-0.054156577872845446
PPQDNVSY	8	Unmodified	_PPQDNVSY_					0	0	0			REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	460.211432	918.408311	0.7225	0.0003325	5.5357	0.0025476	6.2582	0.0028801	460.21390983022053	107.14	0.66512	107.18	106.94	107.6	0.035622	-0.047325	0.00044606	NaN	57.811	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	455530	+		42619	15596	28479	28492							-0.054156577872845446
PPQDNVSY	8	Unmodified	_PPQDNVSY_					0	0	0			REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	460.211432	918.408311	-1.0856	-0.0004996	7.1834	0.0033059	6.0979	0.0028063	460.2147906094078	107.01	0.75294	107.15	106.81	107.57	0.13866	-0.07095	0.0019627	NaN	57.811	44	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	663030	+		42620	15596	28479	28492							-0.054156577872845446
PPQDNVSY	8	Unmodified	_PPQDNVSY_					0	0	0			REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	460.211432	918.408311	0.76368	0.00035145	5.6398	0.0025955	6.4035	0.002947	460.2139477031566	107.08	0.72454	107.17	106.91	107.63	0.091255	-0.054583	0.0005419	NaN	57.811	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	452970	+		42621	15596	28479	28492							-0.054156577872845446
PPQDNVSY	8	Unmodified	_PPQDNVSY_					0	0	0			REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	REV__chr14:49674216-49679725|54|10.67|0.57|4.22|-|0|POLE2,POLE2|3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	460.211432	918.408311	-1.7445	-0.00080285	8.3457	0.0038408	6.6012	0.0030379	460.21514620228135	107.2	0.68595	107.23	106.89	107.58	0.036125	0.0078512	0.0030324	NaN	57.811	38	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	411340	+		42622	15596	28479	28492							-0.054156577872845446
PPQFYAILD	9	Unmodified	_PPQFYAILD_					0	0	0			REV__ENSG00000198838|ENST00000634891|RYR3	REV__ENSG00000198838|ENST00000634891|RYR3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8169555664062	2	532.276575	1062.5386	0.83033	0.00044196	-1.1236	-0.00059808	-0.29331	-0.00015612	532.2758751729049	87.843	0.77916	88.292	87.934	88.713	0.44893					24	18	2	0	0	0	0.20789	1	10298	10298		42.396	5.237	1	205430	+		42623	23393	28480	28493	48359	48359					0.009829382117231944
PPQHAVKLML	10	Unmodified	_PPQHAVKLML_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3299560546875	2	567.328619	1132.64269	-0.54401	-0.00030863	3.1144	0.0017669	2.5704	0.0014583	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.86589	1	8762	8762		29.15	0	1	4477200	+		42624	17968	28481	28494	48360	48360					0.08166941767581193
PPQHAVKLML	10	Unmodified	_PPQHAVKLML_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3302001953125	2	567.328619	1132.64269	1.8589	0.0010546	0.20517	0.0001164	2.0641	0.001171	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86589	1	9683	9683		29.15	1.2673	1	15439000	+		42625	17968	28481	28494	48361	48361					0.08166941767581193
PPQHAVKLML	10	Unmodified	_PPQHAVKLML_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.329833984375	2	567.328619	1132.64269	1.492	0.00084643	0.85585	0.00048555	2.3478	0.001332	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.85934	1	9336	9336		35.618	5.1146	1	5346500	+		42626	17968	28481	28494	48362	48362					0.08166941767581193
PPQHAVKLML	10	Unmodified	_PPQHAVKLML_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	REV__nc|ENSG00000112851|Q96RT1-6|ERBIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3296508789062	2	567.328619	1132.64269	-1.3957	-0.00079181	3.7842	0.0021469	2.3885	0.0013551	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.86589	1	8950	8950		29.15	3.5755	1	5956400	+		42627	17968	28481	28494	48363	48363					0.08166941767581193
PPQIVIAS	8	Unmodified	_PPQIVIAS_					0	0	0			REV__nc|ENSG00000225830|P0DP91|ERCC6	REV__nc|ENSG00000225830|P0DP91|ERCC6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7462463378906	2	412.747453	823.480354	-1.221	-0.00050397	-1.2134	-0.00050081	-2.4344	-0.0010048	412.7467805691387	85.252	3.325	85.252	83.926	87.251	0					125	76	4	0	0	0	0.86288	1	8099	8099		26.796	0	1	835890	+		42628	30209	28482	28495	48364	48364					0.06155301357080134
PPQIVIAS	8	Unmodified	_PPQIVIAS_					0	0	0			REV__nc|ENSG00000225830|P0DP91|ERCC6	REV__nc|ENSG00000225830|P0DP91|ERCC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7461242675781	2	412.747453	823.480354	0.7641	0.00031538	-3.3391	-0.0013782	-2.575	-0.0010628	412.7458735732829	85.139	3.1869	85.067	83.891	87.078	-0.07196					136	73	4	0	0	0	0.87922	1	8712	8712		31.955	3.7006	1	1556000	+		42629	30209	28482	28495	48365	48365					0.06155301357080134
PPQIVIAS	8	Unmodified	_PPQIVIAS_					0	0	0			REV__nc|ENSG00000225830|P0DP91|ERCC6	REV__nc|ENSG00000225830|P0DP91|ERCC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7460632324219	2	412.747453	823.480354	-1.81	-0.00074707	-1.0377	-0.00042831	-2.8477	-0.0011754	412.74693613939564	84.91	2.7925	85.06	84.234	87.026	0.14951					114	64	4	0	0	0	0.80706	2	8221	8221;8256		25.45	0	1	976210	+		42630	30209	28482	28495	48366;48367	48366					0.06155301357080134
PPQKAHLAL	9	Unmodified	_PPQKAHLAL_					0	0	0		ENST00000334062.7_1_13:114748460-114748754:-|nuORF	ENST00000334062.7_1_13:114748460-114748754:-|nuORF	ENST00000334062.7_1_13:114748460-114748754:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79071044921875	2	487.792727	973.5709	-1.5393	-0.00075085	-2.8027	-0.0013671	-4.342	-0.002118	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.69914	1	8151	8151		40.573	8.6178	1	1760400			42631	10143	28483	28496	48368	48368					0.08305770405354451
PPQKKPSPIW	10	Unmodified	_PPQKKPSPIW_					0	0	0			REV__ENSG00000181418|ENST00000421952|DDN	REV__ENSG00000181418|ENST00000421952|DDN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3427124023438	2	589.340041	1176.66553	0.80964	0.00047716	3.789	0.002233	4.5986	0.0027102	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.86718	1	9203	9203		27.882	0.83493	1	6634500	+		42632	22459	28484	28497	48369	48369					0.0842628415668969
PPQKPPPPN	9	Unmodified	_PPQKPPPPN_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2684326171875	2	486.269084	970.523616	-1.0289	-0.00050034	-2.8077	-0.0013653	-3.8366	-0.0018656	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.71772	2	8129	8129;8354		39.253	3.6345	1	1182200			42633	3642	28485	28498	48370;48371	48370					0.037174911343640815
PPQKPPPPN	9	Unmodified	_PPQKPPPPN_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.2669982910156	2	486.269084	970.523616	-0.087647	-4.262E-05	-3.8323	-0.0018635	-3.9199	-0.0019061	486.26710603472304	86.356	4.0954	86.423	85.117	89.212	0.067444					314	95	4	0	0	0	0.76764	1	8818	8818		34.173	0.65696	1	1700900			42634	3642	28485	28498	48372	48372					0.037174911343640815
PPQLAAPGRRA	11	Unmodified	_PPQLAAPGRRA_					0	0	0			REV__ENST00000219271.3_1_16:58079013-58079367:+|nuORF	REV__ENST00000219271.3_1_16:58079013-58079367:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3297729492188	2	567.330539	1132.64652	0.48094	0.00027285	-1.4928	-0.00084691	-1.0119	-0.00057406	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.69995	1	8957	8957		31.53	2.3803	1	6590100	+		42635	24146	28486	28499	48373	48373					0.0855074758567298
PPQLAAPGRRA	11	Unmodified	_PPQLAAPGRRA_					0	0	0			REV__ENST00000219271.3_1_16:58079013-58079367:+|nuORF	REV__ENST00000219271.3_1_16:58079013-58079367:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.32861328125	2	567.330539	1132.64652	0.27026	0.00015333	-1.2412	-0.00070419	-0.97098	-0.00055087	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.69995	1	11111	11111		31.53	5.9558	1	6007000	+		42636	24146	28486	28499	48374	48374					0.0855074758567298
PPQLAPRVP	9	Unmodified	_PPQLAPRVP_					0	0	0			REV__ENSG00000184863|ENST00000401878|RBM33	REV__ENSG00000184863|ENST00000401878|RBM33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7904052734375	2	487.792727	973.5709	-1.3135	-0.00064074	-3.0168	-0.0014716	-4.3304	-0.0021123	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.58151	1	8610	8610		47.916	13.743	1	2239000	+		42637	22706	28487	28500	48375	48375					0.08305770405377189
PPQLGPVAPLD	11	Unmodified	_PPQLGPVAPLD_					0	0	0			REV__ENST00000333213.10_1_17:73512940-73517507:+|nuORF	REV__ENST00000333213.10_1_17:73512940-73517507:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3064575195312	2	552.308406	1102.60226	-0.59209	-0.00032702	-2.8479	-0.0015729	-3.44	-0.0018999	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.64498	1	9225	9225		39.253	5.0803	1	1102700	+		42638	25146	28488	28501	48376	48376					0.05506298648788288
PPQLPSLPNP	10	Unmodified	_PPQLPSLPNP_					0	0	0			REV__ENST00000239144.4_1_17:46689908-46690184:-|nuORF	REV__ENST00000239144.4_1_17:46689908-46690184:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2931518554688	2	530.295299	1058.57605	-0.034361	-1.8221E-05	-3.4792	-0.001845	-3.5136	-0.0018632	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.82886	1	9269	9269		37.812	0.65241	1	1852900	+		42639	24222	28489	28502	48377	48377					0.04910029477309763
PPQLQGRHSK	10	Unmodified	_PPQLQGRHSK_					0	0	0		ENST00000473478.5_1_2:148779198-148811970:+|nuORF	ENST00000473478.5_1_2:148779198-148811970:+|nuORF	ENST00000473478.5_1_2:148779198-148811970:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3195190429688	2	574.320171	1146.62579	-0.44784	-0.0002572	-0.65623	-0.00037689	-1.1041	-0.00063409	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.86621	1	9308	9308		26.063	0.48933	1	1099700			42640	12281	28490	28503	48378	48378					0.058341572059816826
PPQPEPLIVSA	11	Unmodified	_PPQPEPLIVSA_					0	0	0			REV__ENST00000451020.6_1_4:467807-467894:-|nuORF	REV__ENST00000451020.6_1_4:467807-467894:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3193359375	2	574.321514	1146.62847	0.81881	0.00047026	-4.3328	-0.0024884	-3.514	-0.0020181	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.53361	1	9674	9674		49.536	18.006	1	1866200	+		42641	26879	28491	28504	48379	48379					0.061025678202895506
PPQPEPLIVSA	11	Unmodified	_PPQPEPLIVSA_					0	0	0			REV__ENST00000451020.6_1_4:467807-467894:-|nuORF	REV__ENST00000451020.6_1_4:467807-467894:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3191528320312	2	574.321514	1146.62847	-1.3729	-0.0007885	-2.1573	-0.001239	-3.5302	-0.0020275	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.67778	1	9515	9515		35.152	3.6222	1	1586900	+		42642	26879	28491	28504	48380	48380					0.061025678202895506
PPQPKHKV	8	Unmodified	_PPQPKHKV_					0	0	0			REV__ENSG00000163873|ENST00000373091|GRIK3	REV__ENSG00000163873|ENST00000373091|GRIK3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7776794433594	2	465.779619	929.544686	-1.2002	-0.00055902	-3.1863	-0.0014841	-4.3865	-0.0020432	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.88915	1	7593	7593		35.201	6.9464	1	683640	+		42643	20988	28492	28505	48381	48381					0.07709501233898663
PPQPLHPK	8	Unmodified	_PPQPLHPK_					0	0	0			REV__ENST00000598178.1_1_19:41129590-41129683:+|nuORF	REV__ENST00000598178.1_1_19:41129590-41129683:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26177978515625	2	457.266345	912.518136	-0.13162	-6.0186E-05	-4.207	-0.0019237	-4.3386	-0.0019839	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.87922	1	7682	7682		31.955	5.1588	1	1194000	+		42644	29280	28493	28506	48382	48382					0.05837812342554116
PPQPPAGRGAR	11	Unmodified	_PPQPPAGRGAR_					0	0	0		ENST00000358901.10_1_9:35068350-35072606:-|nuORF;ENST00000448530.5_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3068237304688	2	552.307064	1102.59957	-0.59209	-0.00032702	-0.41687	-0.00023024	-1.009	-0.00055726	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.66929	1	9104	9104		36.447	2.5251	1	1102700			42645	10419	28494	28507	48383	48383					0.052378880345031575
PPQPPAGRGAR	11	Unmodified	_PPQPPAGRGAR_					0	0	0		ENST00000358901.10_1_9:35068350-35072606:-|nuORF;ENST00000448530.5_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3058471679688	2	552.307064	1102.59957	-0.70613	-0.00039	-0.47813	-0.00026407	-1.1843	-0.00065407	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.65746	1	9667	9667		37.812	0.65241	1	1609500			42646	10419	28494	28507	48384	48384					0.052378880345031575
PPQPPAGRGAR	11	Unmodified	_PPQPPAGRGAR_					0	0	0		ENST00000358901.10_1_9:35068350-35072606:-|nuORF;ENST00000448530.5_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3057250976562	2	552.307064	1102.59957	2.2801	0.0012593	-3.3671	-0.0018597	-1.087	-0.00060038	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.67778	2	9896	9896;9932		35.152	2.4355	1	1797400			42647	10419	28494	28507	48385;48386	48385					0.052378880345031575
PPQPPAGRGAR	11	Unmodified	_PPQPPAGRGAR_					0	0	0		ENST00000358901.10_1_9:35068350-35072606:-|nuORF;ENST00000448530.5_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.30615234375	2	552.307064	1102.59957	1.2817	0.0007079	-2.5363	-0.0014008	-1.2546	-0.00069293	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.67778	3	9691	9631;9691;9728		35.152	3.6222	1	1712700			42648	10419	28494	28507	48387;48388;48389	48388					0.052378880345031575
PPQPPAGRGAR	11	Unmodified	_PPQPPAGRGAR_					0	0	0		ENST00000358901.10_1_9:35068350-35072606:-|nuORF;ENST00000448530.5_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3062133789062	2	552.307064	1102.59957	0.78014	0.00043088	-1.9577	-0.0010812	-1.1775	-0.00065035	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.65746	1	9485	9485		37.812	2.1932	1	1841700			42649	10419	28494	28507	48390	48390					0.052378880345031575
PPQPPAGRGAR	11	Unmodified	_PPQPPAGRGAR_					0	0	0		ENST00000358901.10_1_9:35068350-35072606:-|nuORF;ENST00000448530.5_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3059692382812	2	552.307064	1102.59957	-1.4446	-0.00079788	0.40047	0.00022118	-1.0442	-0.00057669	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.66929	1	9336	9336		36.447	8.3653	1	1677300			42650	10419	28494	28507	48391	48391					0.052378880345031575
PPQPPAGRGAR	11	Unmodified	_PPQPPAGRGAR_					0	0	0		ENST00000358901.10_1_9:35068350-35072606:-|nuORF;ENST00000448530.5_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	ENST00000358901.10_1_9:35068350-35072606:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.3063354492188	2	552.307064	1102.59957	-0.69245	-0.00038245	-0.17844	-9.8556E-05	-0.8709	-0.000481	552.3068506755722	92.408	2.4109	92.871	91.891	94.302	0.46249					185	56	4	0	0	0	0.61369	1	11016	11016		42.864	5.0528	1	607550			42651	10419	28494	28507	48392	48392					0.052378880345031575
PPQPPKPAAE	10	Unmodified	_PPQPPKPAAE_					0	0	0			REV__ENSG00000173852|ENST00000638088|DPY19L1	REV__ENSG00000173852|ENST00000638088|DPY19L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.9705810546875	2	516.279649	1030.54475	0.32946	0.00017009	-2.9221	-0.0015086	-2.5926	-0.0013385	516.2779310710704	17.784	0.28568	17.163	17.023	17.308	-0.62141					11	7	2	0	0	0	0.37624	1	319	319		8.2351	0	1	64250	+		42652	21957	28495	28508	48393	48393					0.030694564432451443
PPQPPLLLHE	10	Unmodified	_PPQPPLLLHE_					0	0	0			REV__ENST00000462351.5_1_2:220160899-220172331:-|nuORF	REV__ENST00000462351.5_1_2:220160899-220172331:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8236694335938	2	570.824224	1139.63389	-1.0085	-0.00057568	2.5972	0.0014825	1.5887	0.00090686	570.8254743342769	59.03	1.033	59.422	58.941	59.974	0.39209					57	24	3	0	0	0	0.86718	1	6230	6230		27.882	1.1893	1	913650	+		42653	16401	28496	28509	48394	48394					0.06966291402750358
PPQPRRAAPTT	11	Unmodified	_PPQPRRAAPTT_					0	0	0		nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD;nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD;nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD;nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD;ENSG00000213672|ENST00000294129|NCKIPSD;chr3:48683012-48686176|43|10.51|0.49|4.42|-|ENST00000426678|NCKIPSD,NCKIPSD	nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD	nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.3330688476562	2	596.333279	1190.652	0.85589	0.0005104	-1.5023	-0.00089585	-0.64637	-0.00038545	596.3322598839247	96.043	3.1049	96.206	95.311	98.416	0.16316					228	72	4	0	0	0	0.7144	1	9995	9995		29.17	5.6474	1	1469100			42654	8599	28497	28510	48395	48395					0.06430426377460208
PPQRGQPPRG	10	Unmodified	_PPQRGQPPRG_					0	0	0		ENST00000507059.5_1_5:180043993-180056331:-|nuORF	ENST00000507059.5_1_5:180043993-180056331:-|nuORF	ENST00000507059.5_1_5:180043993-180056331:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3170776367188	2	545.299239	1088.58392	0.1476	8.0487E-05	0.46822	0.00025532	0.61582	0.00033581	545.3005156351686	87.692	0.25878	87.893	87.671	87.93	0.20114					6	5	2	0	0	0	0.37624	1	8663	8663		14.865	0	1	23657			42655	12951	28498	28511	48396	48396					0.043176015174594795
PPQRLPEPV	9	Unmodified	_PPQRLPEPV_					0	0	0			REV__ENST00000284240.9_1_11:119289068-119289137:-|nuORF	REV__ENST00000284240.9_1_11:119289068-119289137:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7936401367188	2	516.795466	1031.57638	-1.5587	-0.00080555	-2.3442	-0.0012115	-3.9029	-0.002017	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.77546	1	8785	8785		31.955	1.4512	1	755180	+		42656	24623	28499	28512	48397	48397					0.06185449197187154
PPQRRSKPGK	10	Unmodified	_PPQRRSKPGK_					0	0	0		ENST00000573745.1_1_17:7165530-7166136:-|nuORF	ENST00000573745.1_1_17:7165530-7166136:-|nuORF	ENST00000573745.1_1_17:7165530-7166136:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8446044921875	2	575.843813	1149.67307	2.9016	0.0016708	-3.7939	-0.0021847	-0.89234	-0.00051385	575.8413930911684	103.43	0.91891	103.69	103.41	104.33	0.26524					24	21	2	0	0	0	0.86471	1	12625	12625		30.318	4.8675	1	605000			42657	14025	28500	28513	48398	48398					0.10422436476983421
PPQRVRHLS	9	Unmodified	_PPQRVRHLS_					0	0	0		ENST00000264852.8_2_3:113347457-113347640:+|nuORF	ENST00000264852.8_2_3:113347457-113347640:+|nuORF	ENST00000264852.8_2_3:113347457-113347640:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3172607421875	2	545.317432	1088.62031	1.1684	0.00063715	-2.5262	-0.0013776	-1.3578	-0.00074041	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.76255	1	8947	8947		35.618	1.4457	1	4705800			42658	9488	28501	28514	48399	48399					0.07954478414194455
PPQSGKTVPPL	11	Unmodified	_PPQSGKTVPPL_					0	0	0			REV__ENST00000558380.1_1_15:65112205-65113645:-|nuORF	REV__ENST00000558380.1_1_15:65112205-65113645:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8199462890625	2	560.821681	1119.62881	-1.1548	-0.00064764	-2.2174	-0.0012436	-3.3722	-0.0018912	560.8203192234314	92.561	2.9962	92.631	91.312	94.308	0.06987					218	70	4	0	0	0	0.67778	1	9600	9600		35.152	2.4015	1	775670	+		42659	19616	28502	28515	48400	48400					0.07377987540121467
PPQVLLNAPQ	10	Unmodified	_PPQVLLNAPQ_					0	0	0			REV__nc|ENSG00000148396|O15027-4|SEC16A	REV__nc|ENSG00000148396|O15027-4|SEC16A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.8062744140625	2	538.808574	1075.60259	-1.4886	-0.00080208	-1.9733	-0.0010633	-3.462	-0.0018653	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.74274	1	8935	8935		42.396	0	1	783690	+		42660	20115	28503	28516	48401	48401					0.06781718368665679
PPRAAPLH	8	Unmodified	_PPRAAPLH_					0	0	0		nc|ENSG00000100346|Q9P0X4-2|CACNA1I;ENSG00000100346|ENST00000402142|CACNA1I;nc|ENSG00000100346|Q9P0X4-3|CACNA1I;nc|ENSG00000100346|Q9P0X4-4|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7495422363281	2	429.750862	857.487171	-2.154	-0.00092569	-0.54032	-0.0002322	-2.6943	-0.0011579	429.75051038702645	40.625	2.1327	41.017	40.832	42.965	0.39209					111	57	2	0	0	0	0.89457	1	3641	3641		37.028	3.5129	1	10174000			42661	1830	28504	28517	48402	48402					0.052726590283214136
PPRARTGG	8	Unmodified	_PPRARTGG_					0	0	0			REV__ENST00000551727.5_1_12:104531631-104531682:-|nuORF	REV__ENST00000551727.5_1_12:104531631-104531682:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24859619140625	2	406.230294	810.446034	-1.1755	-0.00047751	-2.3447	-0.00095248	-3.5202	-0.00143	406.22915112434015	88.435	0.21196	88.435	88.336	88.548	0					7	4	2	0	0	0	0.4196	1	8508	8508		18.324	10.093	1	35599	+		42662	28611	28505	28518	48403	48403					0.03322897988846307
PPRASPLLPMV	11	Unmodified	_PPRASPLLPMV_					0	0	0		ENST00000591584.1_1_17:40925493-40926039:+|nuORF	ENST00000591584.1_1_17:40925493-40926039:+|nuORF	ENST00000591584.1_1_17:40925493-40926039:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427124023438	2	589.341726	1176.6689	0.83312	0.00049099	1.1429	0.00067355	1.976	0.0011645	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.6921	1	9933	9933		32.812	1.2826	1	20363000			42663	14276	28506	28519	48404	48404					0.0876321093903698
PPREPRRRQRR	11	Unmodified	_PPREPRRRQRR_					0	0	0			REV__ENST00000302787.2_1_4:1857661-1857766:-|nuORF	REV__ENST00000302787.2_1_4:1857661-1857766:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.9679870605469	3	501.966174	1502.87669	1.4185	0.00071206	2.5211	0.0012655	3.9396	0.0019776	501.9674555649343	33.874	1.1122	34.179	33.871	34.984	0.30494					80	26	5	0	0	0	0.81892	1	2491	2491		8.0344	1.7135	1	4207500	+		42664	24790	28507	28520	48405	48405					0.14536973971144107
PPRETRKH	8	Unmodified	_PPRETRKH_					0	0	0		ENST00000591666.5_1_19:5626419-5648065:+|nuORF	ENST00000591666.5_1_19:5626419-5648065:+|nuORF	ENST00000591666.5_1_19:5626419-5648065:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.7912292480469	2	510.788507	1019.56246	0.43971	0.0002246	2.7455	0.0014024	3.1852	0.001627	510.78950207168157	59.354	0.59127	59.468	59.183	59.775	0.11396					29	15	3	0	0	0	0.87479	1	5102	5102		30.504	0	1	109150			42665	14278	28508	28521	48406	48406					0.05346216488760547
PPRFISCPEAI	11	Carbamidomethyl (C)	_PPRFISC(Carbamidomethyl (C))PEAI_	PPRFISC(1)PEAI		PPRFISC(60)PEAI		0	1	0		ENST00000293648.8_1_19:9771409-9771511:-|nuORF	ENST00000293648.8_1_19:9771409-9771511:-|nuORF	ENST00000293648.8_1_19:9771409-9771511:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.83251953125	2	643.831723	1285.64889	0.15902	0.00010238	2.0898	0.0013455	2.2489	0.0014479	643.8329272134301	49.894	0.58112	50.341	50.143	50.724	0.4476					30	13	3	0	0	0	0.39037	1	4893	4893		60.118	13.661	1	780390			42666	9697	28509	28522	48407	48407	125				0.01749415208450955
PPRGAPPLLD	10	Unmodified	_PPRGAPPLLD_					0	0	0			REV__ENST00000476102.1_1_1:159900586-159913268:-|nuORF	REV__ENST00000476102.1_1_1:159900586-159913268:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.793212890625	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.86218	1	8779	8779		32.812	4.9302	1	817800	+		42667	16893	28510	28523	48408	48408					0.06185449197187154
PPRGLRSLCV	10	Unmodified	_PPRGLRSLCV_					0	0	0			REV__ENST00000565843.5_1_16:71913924-71917392:-|nuORF	REV__ENST00000565843.5_1_16:71913924-71917392:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3172607421875	2	549.316043	1096.61753	0.23279	0.00012788	2.6164	0.0014372	2.8492	0.0015651	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.86718	1	10611	10611		27.882	4.8398	1	3004300	+		42668	28860	28511	28524	48409	48409					0.07308886965006423
PPRGPRRLAS	10	Unmodified	_PPRGPRRLAS_					0	0	0		ENST00000434837.7_1_6:37664592-37664970:-|nuORF	ENST00000434837.7_1_6:37664592-37664970:-|nuORF	ENST00000434837.7_1_6:37664592-37664970:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8299560546875	2	553.830706	1105.64686	0.76565	0.00042404	-1.6754	-0.00092791	-0.9098	-0.00050387	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.86763	1	8945	8945		26.693	0	1	6029400			42669	11699	28512	28525	48410	48410					0.09826167305504896
PPRGPRRLAS	10	Unmodified	_PPRGPRRLAS_					0	0	0		ENST00000434837.7_1_6:37664592-37664970:-|nuORF	ENST00000434837.7_1_6:37664592-37664970:-|nuORF	ENST00000434837.7_1_6:37664592-37664970:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.830078125	2	553.830706	1105.64686	-1.4397	-0.00079733	0.48085	0.00026631	-0.95882	-0.00053102	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.86589	1	9111	9111		29.15	5.6269	1	5453100			42670	11699	28512	28525	48411	48411					0.09826167305504896
PPRGPRRLAS	10	Unmodified	_PPRGPRRLAS_					0	0	0		ENST00000434837.7_1_6:37664592-37664970:-|nuORF	ENST00000434837.7_1_6:37664592-37664970:-|nuORF	ENST00000434837.7_1_6:37664592-37664970:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.830810546875	2	553.830706	1105.64686	0.37109	0.00020552	-1.4521	-0.0008042	-1.081	-0.00059868	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.86718	1	10479	10479		27.882	3.3631	1	1786500			42671	11699	28512	28525	48412	48412					0.09826167305504896
PPRGRPPV	8	Unmodified	_PPRGRPPV_					0	0	0			REV__ENST00000358923.10_1_5:58334704-58335138:-|nuORF	REV__ENST00000358923.10_1_5:58334704-58335138:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2628173828125	2	438.264136	874.51372	-0.087987	-3.8562E-05	-0.71359	-0.00031274	-0.80158	-0.0003513	438.2637207814046	39.241	0.97984	39.189	38.905	39.885	-0.052727					39	26	2	0	0	0	0.86791	1	2395	2395		28.254	0	1	79258	+		42672	25447	28513	28526	48413	48413					0.07144347919643224
PPRGSVRD	8	Unmodified	_PPRGSVRD_					0	0	0			REV__L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|107|3|sense	REV__L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|107|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2408752441406	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.90523	1	8185	8185		40.778	7.2626	1	1244000	+		42673	29497	28514	28527	48414	48414					0.021228632976999506
PPRHVTRR	8	Unmodified	_PPRHVTRR_					0	0	0		ENST00000571138.5_1_17:5014814-5017504:+|nuORF	ENST00000571138.5_1_17:5014814-5017504:+|nuORF	ENST00000571138.5_1_17:5014814-5017504:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8037109375	2	509.804491	1017.59443	0.9788	0.00049899	-2.5136	-0.0012815	-1.5348	-0.00078246	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.85277	1	8652	8652		25.45	4.9683	1	979740			42674	13997	28515	28528	48415	48415					0.08633628962559214
PPRHVTRR	8	Unmodified	_PPRHVTRR_					0	0	0		ENST00000571138.5_1_17:5014814-5017504:+|nuORF	ENST00000571138.5_1_17:5014814-5017504:+|nuORF	ENST00000571138.5_1_17:5014814-5017504:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.80389404296875	2	509.804491	1017.59443	0.6868	0.00035014	-2.2328	-0.0011383	-1.546	-0.00078818	509.80326235241614	86.403	4.313	86.552	84.994	89.307	0.14902					345	101	5	0	0	0	0.87922	1	8433	8433		31.955	2.1133	1	3017600			42675	13997	28515	28528	48416	48416					0.08633628962559214
PPRKELEQIR	10	Unmodified	_PPRKELEQIR_					0	0	0			REV__ENSG00000167880|ENST00000301607|EVPL	REV__ENSG00000167880|ENST00000301607|EVPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5817565917969	3	422.582333	1264.72517	2.9692	0.0012547	-3.8305	-0.0016187	-0.86127	-0.00036396	422.58062707178027	97.728	3.629	97.776	96.312	99.941	0.048164					208	84	4	0	0	0	0.86207	1	10405	10405		24.232	1.6702	1	464700	+		42676	21433	28516	28529	48417	48417					0.1033955510006308
PPRKRNRIVC	10	Unmodified	_PPRKRNRIVC_					0	0	0		ENST00000310837.8_1_17:39845180-39847075:+|nuORF	ENST00000310837.8_1_17:39845180-39847075:+|nuORF	ENST00000310837.8_1_17:39845180-39847075:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8690795898438	2	619.866766	1237.71898	0.87763	0.00054401	3.443	0.0021342	4.3206	0.0026782	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.86452	1	9800	9800		30.504	0.18592	1	6574700			42677	9912	28517	28530	48418	48418					0.10962758387586291
PPRLCCRARVL	11	Unmodified	_PPRLCCRARVL_					0	0	0		ENST00000398421.6_1_7:74202534-74203501:+|nuORF	ENST00000398421.6_1_7:74202534-74203501:+|nuORF	ENST00000398421.6_1_7:74202534-74203501:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.36328125	2	642.363002	1282.71145	1.6044	0.0010306	-3.1797	-0.0020425	-1.5753	-0.0010119	642.3616311768967	112.19	0.42336	112.3	112.09	112.51	0.10638					48	15	4	0	0	0	0.78658	1	12073	12073		14.137	0.68308	1	22937000			42678	11183	28518	28531	48419	48419					0.08140282795625353
PPRLPLIVL	9	Unmodified	_PPRLPLIVL_					0	0	0			REV__ENST00000252934.9_1_22:46067795-46085660:+|nuORF	REV__ENST00000252934.9_1_22:46067795-46085660:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.9017639160156	2	509.344595	1016.67464	-0.053654	-2.7328E-05	4.4482	0.0022657	4.3946	0.0022383	509.846985892644	119.43	0.09906	119.36	119.32	119.42	-0.075302					5	4	2	0	0	0	0.20789	1	12802	12802		8.2313	0	1	13467	+		42679	24299	28519	28532	48420	48420					0.1669667751303905
PPRLRRHS	8	Unmodified	_PPRLRRHS_					0	0	0			REV__ENST00000528273.5_1_17:43509005-43510572:-|nuORF	REV__ENST00000528273.5_1_17:43509005-43510572:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8034973144531	2	509.804491	1017.59443	-1.4574	-0.000743	-0.13657	-6.9626E-05	-1.594	-0.00081262	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.86791	1	8116	8116		28.254	5.2118	1	920080	+		42680	28245	28520	28533	48421	48421					0.08633628962547846
PPRLRRHS	8	Unmodified	_PPRLRRHS_					0	0	0			REV__ENST00000528273.5_1_17:43509005-43510572:-|nuORF	REV__ENST00000528273.5_1_17:43509005-43510572:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8036804199219	2	509.804491	1017.59443	-0.073626	-3.7535E-05	-1.4596	-0.00074412	-1.5332	-0.00078165	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.86791	1	10038	10038		28.254	2.6802	1	3087300	+		42681	28245	28520	28533	48422	48422					0.08633628962547846
PPRLRRSH	8	Unmodified	_PPRLRRSH_					0	0	0		ENST00000602980.1_1_7:29725056-29725440:+|nuORF	ENST00000602980.1_1_7:29725056-29725440:+|nuORF	ENST00000602980.1_1_7:29725056-29725440:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8035583496094	2	509.804491	1017.59443	-0.93407	-0.00047619	-0.43992	-0.00022427	-1.374	-0.00070047	509.8042014095356	84.682	2.4835	84.682	83.134	85.618	0					128	59	3	0	0	0	0.86288	1	7992	7992		26.796	0	1	609880			42682	14418	28521	28534	48423	48423					0.08633628962547846
PPRLRRSH	8	Unmodified	_PPRLRRSH_					0	0	0		ENST00000602980.1_1_7:29725056-29725440:+|nuORF	ENST00000602980.1_1_7:29725056-29725440:+|nuORF	ENST00000602980.1_1_7:29725056-29725440:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8038330078125	2	509.804491	1017.59443	0.9788	0.00049899	-2.5136	-0.0012815	-1.5348	-0.00078246	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.88915	1	8761	8761		35.201	0	1	979740			42683	14418	28521	28534	48424	48424					0.08633628962547846
PPRPARGSRL	10	Unmodified	_PPRPARGSRL_					0	0	0		ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8299560546875	2	553.830706	1105.64686	1.7761	0.00098364	-2.9855	-0.0016535	-1.2094	-0.00066981	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.86348	1	9361	9361		31.53	3.6476	1	1628400			42684	7361	28522	28535	48425	48425					0.09826167305527633
PPRPARGSRL	10	Unmodified	_PPRPARGSRL_					0	0	0		ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8301391601562	2	553.830706	1105.64686	-1.2274	-0.00067979	0.095928	5.3128E-05	-1.1315	-0.00062666	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.86218	1	10529	10529		32.812	0.85756	1	1825600			42685	7361	28522	28535	48426	48426					0.09826167305527633
PPRPGLGPGP	10	Unmodified	_PPRPGLGPGP_					0	0	0		ENST00000417302.5_1_11:534311-535546:-|nuORF	ENST00000417302.5_1_11:534311-535546:-|nuORF	ENST00000417302.5_1_11:534311-535546:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7672424316406	2	472.769252	943.52395	-1.1355	-0.00053681	-3.1204	-0.0014752	-4.2559	-0.002012	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.86305	1	7826	7826		31.955	7.7521	1	292450			42686	11409	28523	28536	48427	48427					0.04992910854230104
PPRPIFRRSK	10	Unmodified	_PPRPIFRRSK_					0	0	0			REV__ENSG00000006047|ENST00000007699|YBX2	REV__ENSG00000006047|ENST00000007699|YBX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3827514648438	2	627.383106	1252.75166	-0.21918	-0.00013751	-0.42447	-0.00026631	-0.64365	-0.00040381	627.382569161749	117.84	0.45222	117.77	117.68	118.13	-0.07531					39	17	3	0	0	0	0.85694	1	12639	12639		21.96	3.6355	1	1073400	+		42687	16094	28524	28537	48428	48428					0.1353928878206716
PPRPIFRRSK	10	Unmodified	_PPRPIFRRSK_					0	0	0			REV__ENSG00000006047|ENST00000007699|YBX2	REV__ENSG00000006047|ENST00000007699|YBX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.385009765625	2	627.383106	1252.75166	0.97949	0.00061452	-2.5587	-0.0016053	-1.5792	-0.00099076	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.8608	2	12696	12685;12696		34.173	1.3601	1	19815000	+		42688	16094	28524	28537	48429;48430	48430					0.1353928878206716
PPRPIFRRSK	10	Unmodified	_PPRPIFRRSK_					0	0	0			REV__ENSG00000006047|ENST00000007699|YBX2	REV__ENSG00000006047|ENST00000007699|YBX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3828125	2	627.383106	1252.75166	-1.2001	-0.00075294	-0.45671	-0.00028653	-1.6568	-0.0010395	627.3827611804128	112.09	1.416	112.07	111.56	112.98	-0.01989					130	45	4	0	0	0	0.86471	1	11941	11941		30.318	4.7437	1	42384000	+		42689	16094	28524	28537	48431	48431					0.1353928878206716
PPRPLQLPD	9	Unmodified	_PPRPLQLPD_					0	0	0		ENSG00000079313|ENST00000170168|REXO1	ENSG00000079313|ENST00000170168|REXO1	ENSG00000079313|ENST00000170168|REXO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7930908203125	2	516.795466	1031.57638	-0.27573	-0.0001425	-3.7979	-0.0019627	-4.0736	-0.0021052	516.7933490368572	86.056	2.7275	86.241	84.67	87.398	0.18523					138	63	3	0	0	0	0.76764	1	8455	8455		34.173	1.3601	1	324400			42690	1416	28525	28538	48432	48432					0.06185449197187154
PPRPLRPGG	9	Unmodified	_PPRPLRPGG_					0	0	0			REV__ENSG00000135835|ENST00000367588|KIAA1614	REV__ENSG00000135835|ENST00000367588|KIAA1614	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.7824401855469	2	473.782693	945.550834	-0.42615	-0.0002019	0.84378	0.00039977	0.41763	0.00019787	473.7828976830325	21.758	0.79819	21.7	21.484	22.282	-0.057203					55	31	3	0	0	0	0.72402	1	634	634		38.806	12.01	1	107510	+		42691	19255	28526	28539	48433	48433					0.07588019465424622
PPRPPLITQ	9	Unmodified	_PPRPPLITQ_					0	0	0			REV__chr2:65048212-65055530|59|17.08|0.0|20.7|-|0|TE_info:AluJo,AluJo_dup8582,Alu,SINE,donor,+,65055530,65055630|LINC02245,None|1	REV__chr2:65048212-65055530|59|17.08|0.0|20.7|-|0|TE_info:AluJo,AluJo_dup8582,Alu,SINE,donor,+,65055530,65055630|LINC02245,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8036804199219	2	509.805834	1017.59712	-1.4574	-0.000743	-2.7703	-0.0014123	-4.2277	-0.0021553	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.78058	1	8152	8152		30.504	6.3009	1	920080	+		42692	15762	28527	28540	48434	48434					0.08902039576844345
PPRPPRPRVST	11	Unmodified	_PPRPPRPRVST_					0	0	0			REV__ENST00000577399.5_1_17:37558585-37558747:-|nuORF	REV__ENST00000577399.5_1_17:37558585-37558747:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	629.3800048828125	2	630.370195	1258.72584	0.89253	0.00056262	2.4702	0.0015571	3.3627	0.0021198	630.873722834215	67.158	0.12367	67.709	67.608	67.732	0.55071					4	2	2	0	0	0	0.1731	1	7363	7363		28.081	10.613	1	147830	+		42693	29006	28528	28541	48435	48435					0.10682394539776396
PPRPQSLPP	9	Unmodified	_PPRPQSLPP_					0	0	0		ENST00000473532.5_1_9:140005202-140008344:-|nuORF	ENST00000473532.5_1_9:140005202-140008344:-|nuORF	ENST00000473532.5_1_9:140005202-140008344:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7803955078125	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.76255	1	8261	8261		35.618	5.1146	1	385180			42694	12284	28529	28542	48436	48436					0.05589180025708629
PPRPTLLGPA	10	Unmodified	_PPRPTLLGPA_					0	0	0			REV__nc|ENSG00000183248|Q9H6K5-2|PRR36	REV__nc|ENSG00000183248|Q9H6K5-2|PRR36	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.80548095703125	2	509.805834	1017.59712	-0.37726	-0.00019233	-3.8339	-0.0019545	-4.2111	-0.0021469	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.86589	1	8364	8364		29.15	1.2673	1	3415500	+		42695	22588	28530	28543	48437	48437					0.08902039576844345
PPRPVHPAPLP	11	Unmodified	_PPRPVHPAPLP_					0	0	0		nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;ENSG00000171681|ENST00000261168|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP	nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3441162109375	2	589.345658	1176.67676	-0.40075	-0.00023618	-4.2062	-0.0024789	-4.607	-0.0027151	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.67493	1	9014	9014		35.618	0.46626	1	4112500			42696	6696	28531	28544	48438	48438					0.09549106250847217
PPRPVPFPTLG	11	Unmodified	_PPRPVPFPTLG_					0	0	0			REV__ENST00000514826.5_1_4:142142095-142142209:+|nuORF	REV__ENST00000514826.5_1_4:142142095-142142209:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3431396484375	2	589.340041	1176.66553	0.83312	0.00049099	4.0027	0.002359	4.8358	0.00285	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.69995	1	9825	9825		31.53	1.2121	1	20363000	+		42697	28022	28532	28545	48439	48439					0.0842628415668969
PPRPVRRSRP	10	Unmodified	_PPRPVRRSRP_					0	0	0			REV__ENSG00000133124|ENST00000372129|IRS4	REV__ENSG00000133124|ENST00000372129|IRS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.58319091796875	3	406.582779	1216.72651	3.1806	0.0012932	-0.34546	-0.00014046	2.8352	0.0011527	406.5823777958884	112.82	1.2516	112.85	112.71	113.96	0.028854					79	33	3	0	0	0	0.85441	1	12319	12319		20.837	2.3061	1	2434900	+		42698	19062	28533	28546	48440	48440					0.12681233979515127
PPRPYREGRR	10	Unmodified	_PPRPYREGRR_					0	0	0			REV__ENSG00000170035.16,UBE2E3,chr2,+,I3.1,180980974,180981035|12|18.41|1|intron	REV__ENSG00000170035.16,UBE2E3,chr2,+,I3.1,180980974,180981035|12|18.41|1|intron	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3618774414062	2	642.357619	1282.70069	7.159	0.0045986	0.10745	6.902E-05	7.2664	0.0046676	642.3583965461547	111.81	0.66489	111.84	111.7	112.36	0.032707					85	24	5	0	0	0	0.86218	1	13549	13549		32.812	2.3088	1	7954900	+		42699	21626	28534	28547	48441	48441					0.07064339737212322
PPRQPPPQARA	11	Unmodified	_PPRQPPPQARA_					0	0	0		ENSG00000155254|ENST00000285605|MARVELD1	ENSG00000155254|ENST00000285605|MARVELD1	ENSG00000155254|ENST00000285605|MARVELD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5652160644531	3	405.563273	1213.66799	1.5319	0.00062128	2.1099	0.00085571	3.6418	0.001477	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.6921	1	5895	5895		42.338	20.558	1	245170			42700	5317	28535	28548	48442	48442					0.06970132614378599
PPRQRRVPG	9	Unmodified	_PPRQRRVPG_					0	0	0			REV__ENST00000370272.8_1_1:93811711-93811888:+|nuORF	REV__ENST00000370272.8_1_1:93811711-93811888:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8167724609375	2	531.817599	1061.62064	0.7269	0.00038658	-2.1356	-0.0011358	-1.4087	-0.00074918	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.76996	1	8707	8707		33.516	3.1979	1	4496300	+		42701	25649	28536	28549	48443	48443					0.09229898134049108
PPRQRRVPG	9	Unmodified	_PPRQRRVPG_					0	0	0			REV__ENST00000370272.8_1_1:93811711-93811888:+|nuORF	REV__ENST00000370272.8_1_1:93811711-93811888:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8169555664062	2	531.817599	1061.62064	1.0704	0.00056928	-2.3163	-0.0012319	-1.2459	-0.00066258	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.7932	1	10310	10310		25.45	1.2474	1	4490200	+		42702	25649	28536	28549	48444	48444					0.09229898134049108
PPRQRRVPG	9	Unmodified	_PPRQRRVPG_					0	0	0			REV__ENST00000370272.8_1_1:93811711-93811888:+|nuORF	REV__ENST00000370272.8_1_1:93811711-93811888:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8167114257812	2	531.817599	1061.62064	-0.69524	-0.00036974	-0.67303	-0.00035793	-1.3683	-0.00072767	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.72402	1	10112	10112		38.806	6.8513	1	1296000	+		42703	25649	28536	28549	48445	48445					0.09229898134049108
PPRRAAAGS	9	Unmodified	_PPRRAAAGS_					0	0	0		ENST00000409001.5_1_2:182756891-182760783:+|nuORF	ENST00000409001.5_1_2:182756891-182760783:+|nuORF	ENST00000409001.5_1_2:182756891-182760783:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.7446594238281	2	441.74885	881.483148	1.8267	0.00080693	-2.3405	-0.0010339	-0.51378	-0.00022696	441.74804117458024	89.626	0.9129	89.674	89.224	90.137	0.048157					32	20	2	0	0	0	0.20789	1	9255	9255		15.642	0	1	102360			42704	11295	28537	28550	48446	48446					0.03766569534604969
PPRRAAAGS	9	Unmodified	_PPRRAAAGS_					0	0	0		ENST00000409001.5_1_2:182756891-182760783:+|nuORF	ENST00000409001.5_1_2:182756891-182760783:+|nuORF	ENST00000409001.5_1_2:182756891-182760783:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	441.74885	881.483148	-1.1554	-0.00051039	-0.14821	-6.547E-05	-1.3036	-0.00057586	441.7492760764475	89.843	0.91877	89.843	89.387	90.305	0	-0.0065347	0.00091575	NaN	15.642	31	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55828			42705	11295	28537	28550							0.03766569534604969
PPRRAPGG	8	Unmodified	_PPRRAPGG_					0	0	0		ENSG00000253352|ENST00000644773|TUG1	ENSG00000253352|ENST00000644773|TUG1	ENSG00000253352|ENST00000644773|TUG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2326965332031	2	404.232836	806.45112	-0.18723	-7.5686E-05	0.58387	0.00023602	0.39664	0.00016033	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.884	1	8500	8500		33.516	0	1	4185000			42706	8857	28538	28551	48447	48447					0.040152018514731935
PPRRAPGG	8	Unmodified	_PPRRAPGG_					0	0	0		ENSG00000253352|ENST00000644773|TUG1	ENSG00000253352|ENST00000644773|TUG1	ENSG00000253352|ENST00000644773|TUG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.232666015625	2	404.232836	806.45112	2.8761	0.0011626	-2.4963	-0.0010091	0.37984	0.00015354	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.81548	2	8568	8568;8591		26.796	1.222	1	4761400			42707	8857	28538	28551	48448;48449	48448					0.040152018514731935
PPRRCRRRGR	10	Unmodified	_PPRRCRRRGR_					0	0	0		ENST00000573965.1_3_16:2933286-2946490:+|nuORF;ENST00000396958.7_2_16:2933286-2946389:+|nuORF	ENST00000573965.1_3_16:2933286-2946490:+|nuORF	ENST00000573965.1_3_16:2933286-2946490:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2568664550781	3	437.258412	1308.75341	-1.4866	-0.00065002	-0.95523	-0.00041768	-2.4418	-0.0010677	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.85633	1	10270	10270		21.686	4.519	1	981430			42708	11128	28539	28552	48450	48450					0.11138019319014347
PPRRKRRQTG	10	Unmodified	_PPRRKRRQTG_					0	0	0		ENSG00000196569|ENST00000421865|LAMA2	ENSG00000196569|ENST00000421865|LAMA2	ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.9225158691406	3	417.921683	1250.74322	2.7179	0.0011359	-1.2598	-0.00052649	1.4581	0.00060938	417.9211507262476	105.91	2.7799	105.88	105.06	107.84	-0.03714					241	65	4	0	0	0	0.85441	1	11760	11760		20.837	4.3073	1	23169000			42709	8075	28540	28553	48451	48451					0.1278773486544651
PPRRPGLRTG	10	Unmodified	_PPRRPGLRTG_					0	0	0		ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.830322265625	2	553.830706	1105.64686	-0.78391	-0.00043415	-0.44569	-0.00024684	-1.2296	-0.00068099	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.8608	1	9132	9132		34.173	1.3601	1	1489800			42710	14137	28541	28554	48452	48452					0.09826167305527633
PPRRPGLRTG	10	Unmodified	_PPRRPGLRTG_					0	0	0		ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8306884765625	2	553.830706	1105.64686	-0.7821	-0.00043315	-0.068585	-3.7985E-05	-0.85069	-0.00047114	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.6116	1	9394	9394		49.442	10.635	1	5219600			42711	14137	28541	28554	48453	48453					0.09826167305527633
PPRRPGLRTG	10	Unmodified	_PPRRPGLRTG_					0	0	0		ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8305053710938	2	553.830706	1105.64686	2.0416	0.0011307	-3.0404	-0.0016839	-0.99881	-0.00055317	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.8608	1	9552	9552		34.173	3.6689	1	5457600			42712	14137	28541	28554	48454	48454					0.09826167305527633
PPRRPGLRTG	10	Unmodified	_PPRRPGLRTG_					0	0	0		ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8296508789062	2	553.830706	1105.64686	1.198	0.00066348	-2.4064	-0.0013328	-1.2084	-0.00066928	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.80179	2	9171	8979;9171		39.253	6.4404	1	1689700			42713	14137	28541	28554	48455;48456	48456					0.09826167305527633
PPRRPGLRTG	10	Unmodified	_PPRRPGLRTG_					0	0	0		ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8308715820312	2	553.830706	1105.64686	1.287	0.00071279	-2.2482	-0.0012451	-0.96123	-0.00053236	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.86452	1	9481	9481		30.504	7.4612	1	5348100			42714	14137	28541	28554	48457	48457					0.09826167305527633
PPRRPGLRTG	10	Unmodified	_PPRRPGLRTG_					0	0	0		ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8298950195312	2	553.830706	1105.64686	0.7451	0.00041266	-1.999	-0.0011071	-1.2539	-0.00069446	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.74274	1	8824	8824		42.396	5.9494	1	2008100			42715	14137	28541	28554	48458	48458					0.09826167305527633
PPRRPGLRTG	10	Unmodified	_PPRRPGLRTG_					0	0	0		ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	ENST00000584632.5_1_17:37617961-37618159:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.829833984375	2	553.830706	1105.64686	-1.4375	-0.00079614	0.20667	0.00011446	-1.2308	-0.00068168	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.86589	1	8837	8837		29.15	3.0862	1	1728300			42716	14137	28541	28554	48459	48459					0.09826167305527633
PPRRPVAASR	10	Unmodified	_PPRRPVAASR_					0	0	0		nc|ENSG00000168397|Q9Y4P1-2|ATG4B	nc|ENSG00000168397|Q9Y4P1-2|ATG4B	nc|ENSG00000168397|Q9Y4P1-2|ATG4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.830322265625	2	553.830706	1105.64686	2.0416	0.0011307	-3.0404	-0.0016839	-0.99881	-0.00055317	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.8486	1	9672	9672		18.262	0.89712	1	5457600			42717	15079	28542	28555	48460	48460					0.09826167305504896
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3430786132812	2	589.343646	1176.67274	-0.36759	-0.00021664	-0.80413	-0.00047391	-1.1717	-0.00069055	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.69995	2	9265	9265;9597		31.53	1.1189	1	11103000			42718	12065	28543	28556	48461;48462	48461					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3428344726562	2	589.343646	1176.67274	-0.67475	-0.00039766	-0.80911	-0.00047684	-1.4839	-0.0008745	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.65746	3	9531	9531;9615;9653		37.812	5.8401	1	5429300			42719	12065	28543	28556	48463;48464;48465	48463					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3428344726562	2	589.343646	1176.67274	-0.6745	-0.00039751	-0.65118	-0.00038377	-1.3257	-0.00078128	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.70737	6	9855	9759;9819;9843;9855;9903;9977		30.318	5.6474	1	16185000			42720	12065	28543	28556	48466;48467;48468;48469;48470;48471	48469					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3424072265625	2	589.343646	1176.67274	2.2135	0.0013045	-3.7891	-0.0022331	-1.5756	-0.00092856	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.70737	3	9761	9749;9761;9822		30.318	3.6248	1	5579200			42721	12065	28543	28556	48472;48473;48474	48473					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3433837890625	2	589.343646	1176.67274	2.472	0.0014569	-3.7901	-0.0022337	-1.3181	-0.00077681	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.7144	1	10327	10327		29.17	2.374	1	16740000			42722	12065	28543	28556	48475	48475					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3425903320312	2	589.343646	1176.67274	-0.65315	-0.00038493	-0.88363	-0.00052076	-1.5368	-0.00090569	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.66929	1	9507	9507		36.447	2.5251	1	5584100			42723	12065	28543	28556	48476	48476					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3430786132812	2	589.343646	1176.67274	-0.65438	-0.00038565	-0.61013	-0.00035958	-1.2645	-0.00074523	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.66929	6	10043	9839;9934;10043;10055;10067;10079		36.447	7.2767	1	16804000			42724	12065	28543	28556	48477;48478;48479;48480;48481;48482	48479					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3426513671875	2	589.343646	1176.67274	0.80964	0.00047716	-2.3286	-0.0013723	-1.5189	-0.00089516	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.70737	1	9275	9275		30.318	2.4355	1	6634500			42725	12065	28543	28556	48483	48483					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3421020507812	2	589.343646	1176.67274	0.81285	0.00047905	-2.3819	-0.0014037	-1.569	-0.00092468	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.70737	2	9417	9417;9453		30.318	4.0441	1	6450100			42726	12065	28543	28556	48484;48485	48484					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3425903320312	2	589.343646	1176.67274	0.83312	0.00049099	-2.1148	-0.0012464	-1.2817	-0.00075536	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.65746	2	9691	9655;9691		37.812	6.2817	1	20363000			42727	12065	28543	28556	48486;48487	48487					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3429565429688	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.61369	3	9699	9519;9602;9699		42.864	11.334	1	17904000			42728	12065	28543	28556	48488;48489;48490	48490					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3428344726562	2	589.343646	1176.67274	0.82336	0.00048524	-2.0045	-0.0011814	-1.1812	-0.00069612	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.68532	3	11079	11079;11210;11382		33.922	2.4355	1	9460500			42729	12065	28543	28556	48491;48492;48493	48491					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3430786132812	2	589.343646	1176.67274	-0.63668	-0.00037522	-0.11858	-6.9885E-05	-0.75526	-0.00044511	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.7144	2	10995	10926;10995		29.17	2.1227	1	2236100			42730	12065	28543	28556	48494;48495	48495					0.09147016757151505
PPRRQVLPGAS	11	Unmodified	_PPRRQVLPGAS_					0	0	0		ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3421020507812	2	589.343646	1176.67274	0.15554	9.1664E-05	-1.2615	-0.00074348	-1.106	-0.00065182	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.66929	3	11246	11246;11290;11322		36.447	7.0705	1	10540000			42731	12065	28543	28556	48496;48497;48498	48496					0.09147016757151505
PPRRRLHS	8	Unmodified	_PPRRRLHS_					0	0	0		ENST00000483704.5_1_17:17207728-17250258:+|nuORF;ENSG00000205309|ENST00000389022|NT5M	ENST00000483704.5_1_17:17207728-17250258:+|nuORF	ENST00000483704.5_1_17:17207728-17250258:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8037109375	2	509.804491	1017.59443	1.253	0.0006388	-2.7657	-0.0014099	-1.5126	-0.00077114	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.884	1	8866	8866		33.516	1.9858	1	3243500			42732	8524	28544	28557	48499	48499					0.08633628962559214
PPRRSDSI	8	Unmodified	_PPRRSDSI_					0	0	0		nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000475613.6_1_10:79580836-79628876:-|nuORF;ENST00000459739.5_1_10:79567604-79581271:-|nuORF;nc|ENSG00000151208|Q8TDM6-3|DLG5	nc|ENSG00000151208|Q8TDM6-4|DLG5	nc|ENSG00000151208|Q8TDM6-4|DLG5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2539978027344	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.89494	1	8391	8391		37.159	0.71236	1	1449300			42733	5101	28545	28558	48500	48500					0.027191324691784757
PPRRVHGR	8	Unmodified	_PPRRVHGR_					0	0	0			REV__ENST00000599227.5_2_19:58740235-58741795:+|nuORF	REV__ENST00000599227.5_2_19:58740235-58741795:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79058837890625	2	487.791384	973.568215	0.84662	0.00041298	-2.4303	-0.0011855	-1.5836	-0.00077249	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.87922	1	8782	8782		31.955	2.1133	1	2238600	+		42734	29295	28546	28559	48501	48501					0.0803735979108069
PPRSTRSL	8	Unmodified	_PPRSTRSL_					0	0	0			REV__ENST00000528175.1_1_8:144803765-144804224:+|nuORF	REV__ENST00000528175.1_1_8:144803765-144804224:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2638854980469	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.9283	1	7866	7866		49.442	8.6634	1	1458600	+		42735	28244	28547	28560	48502	48502					0.054357228488470355
PPRSVRDT	8	Unmodified	_PPRSVRDT_					0	0	0		ENSG00000064270|ENST00000262429|ATP2C2;nc|ENSG00000064270|O75185-2|ATP2C2;nc|ENSG00000064270|O75185-3|ATP2C2;ENST00000567222.1_1_16:84493993-84497335:+|nuORF	ENSG00000064270|ENST00000262429|ATP2C2	ENSG00000064270|ENST00000262429|ATP2C2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.253662109375	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.91472	1	8524	8524		44.117	0	1	1449300			42736	1099	28548	28561	48503	48503					0.027191324691784757
PPRTGPLGRR	10	Unmodified	_PPRTGPLGRR_					0	0	0		ENST00000507939.5_3_5:137878542-137878810:-|nuORF	ENST00000507939.5_3_5:137878542-137878810:-|nuORF	ENST00000507939.5_3_5:137878542-137878810:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8303833007812	2	553.830706	1105.64686	-0.60953	-0.00033757	-0.31573	-0.00017486	-0.92525	-0.00051243	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.8651	1	9019	9019		25.574	2.5316	1	3935500			42737	12967	28549	28562	48504	48504					0.09826167305504896
PPRTGPLGRR	10	Unmodified	_PPRTGPLGRR_					0	0	0		ENST00000507939.5_3_5:137878542-137878810:-|nuORF	ENST00000507939.5_3_5:137878542-137878810:-|nuORF	ENST00000507939.5_3_5:137878542-137878810:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.82958984375	2	553.830706	1105.64686	2.0416	0.0011307	-3.0404	-0.0016839	-0.99881	-0.00055317	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.8545	1	9443	9443		36.447	0.82846	1	5457600			42738	12967	28549	28562	48505	48505					0.09826167305504896
PPRTGPLGRR	10	Unmodified	_PPRTGPLGRR_					0	0	0		ENST00000507939.5_3_5:137878542-137878810:-|nuORF	ENST00000507939.5_3_5:137878542-137878810:-|nuORF	ENST00000507939.5_3_5:137878542-137878810:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.830078125	2	553.830706	1105.64686	1.198	0.00066348	-2.4064	-0.0013328	-1.2084	-0.00066928	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.8545	1	9193	9193		36.447	5.9431	1	1689700			42739	12967	28549	28562	48506	48506					0.09826167305504896
PPRVPLGP	8	Unmodified	_PPRVPLGP_					0	0	0			REV__nc|ENSG00000160282|O95954-3|FTCD	REV__nc|ENSG00000160282|O95954-3|FTCD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.75482177734375	2	416.755613	831.496673	0.85654	0.00035697	-2.1049	-0.00087723	-1.2484	-0.00052026	416.7546905427035	66.077	1.7412	66.462	65.937	67.678	0.38581					138	48	4	0	0	0	0.88915	1	7222	7222		35.201	0	1	3980900	+		42740	29967	28550	28563	48507	48507					0.07418427313848497
PPRVPPGP	8	Unmodified	_PPRVPPGP_					0	0	0		ENST00000433688.2_2_11:63531028-63531832:-|nuORF	ENST00000433688.2_2_11:63531028-63531832:-|nuORF	ENST00000433688.2_2_11:63531028-63531832:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.7396545410156	2	408.739963	815.465373	-1.9297	-0.00078873	1.2966	0.00052999	-0.63302	-0.00025874	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.81548	1	2225	2225		20.482	0	1	521170			42741	11689	28551	28564	48508	48508					0.05025854279756459
PPRVPPGP	8	Unmodified	_PPRVPPGP_					0	0	0		ENST00000433688.2_2_11:63531028-63531832:-|nuORF	ENST00000433688.2_2_11:63531028-63531832:-|nuORF	ENST00000433688.2_2_11:63531028-63531832:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.7391357421875	2	408.739963	815.465373	-0.047648	-1.9476E-05	-0.50077	-0.00020468	-0.54842	-0.00022416	408.73963408946304	36.955	2.5653	36.931	36.681	39.246	-0.023975					119	58	3	0	0	0	0.86791	1	2435	2435		28.254	1.4582	1	457600			42742	11689	28551	28564	48509	48509					0.05025854279756459
PPRVPPGP	8	Unmodified	_PPRVPPGP_					0	0	0		ENST00000433688.2_2_11:63531028-63531832:-|nuORF	ENST00000433688.2_2_11:63531028-63531832:-|nuORF	ENST00000433688.2_2_11:63531028-63531832:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.7393493652344	2	408.739963	815.465373	0.85094	0.00034781	-1.5858	-0.00064816	-0.73482	-0.00030035	408.7393373651895	37.561	2.1469	37.572	37.24	39.387	0.011173					113	49	4	0	0	0	0.89457	1	2487	2487		37.028	7.1869	1	272800			42743	11689	28551	28564	48510	48510					0.05025854279756459
PPRVPPGP	8	Unmodified	_PPRVPPGP_					0	0	0		ENST00000433688.2_2_11:63531028-63531832:-|nuORF	ENST00000433688.2_2_11:63531028-63531832:-|nuORF	ENST00000433688.2_2_11:63531028-63531832:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7389221191406	2	408.739963	815.465373	0.19077	7.7973E-05	-1.706	-0.00069732	-1.5153	-0.00061935	408.7390806742273	40.113	2.4499	40.195	40.004	42.454	0.081345					184	74	3	0	0	0	0.87276	2	2511	2511;2521		39.021	1.993	1	4100500			42744	11689	28551	28564	48511;48512	48511					0.05025854279756459
PPRVRSGG	8	Unmodified	_PPRVRSGG_					0	0	0			REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2362060546875	2	413.238119	824.461684	-1.3714	-0.00056672	1.8341	0.00075792	0.46268	0.0001912	413.2388028419787	75.095	1.9798	75.095	74.071	76.051	0					127	77	2	0	0	0	0.85277	1	6872	6872		25.45	0	1	222450	+		42745	27175	28552	28565	48513	48513					0.04243184505912723
PPRVRSGG	8	Unmodified	_PPRVRSGG_					0	0	0			REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2377624511719	2	413.238119	824.461684	-1.33	-0.0005496	2.1463	0.00088694	0.81635	0.00033735	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.87479	1	7103	7103		30.504	1.3541	1	895630	+		42746	27175	28552	28565	48514	48514					0.04243184505912723
PPRVRSGG	8	Unmodified	_PPRVRSGG_					0	0	0			REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2377014160156	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.84341	4	7165	7165;7279;7334;7528		34.173	5.023	1	1747900	+		42747	27175	28552	28565	48515;48516;48517;48518	48515					0.04243184505912723
PPRVRSGG	8	Unmodified	_PPRVRSGG_					0	0	0			REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2377014160156	2	413.238119	824.461684	-0.12335	-5.0972E-05	0.56146	0.00023202	0.43812	0.00018105	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.86677	3	7416	7416;7457;7999		31.955	7.7521	1	1978800	+		42748	27175	28552	28565	48519;48520;48521	48519					0.04243184505912723
PPRVRSGG	8	Unmodified	_PPRVRSGG_					0	0	0			REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2370300292969	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.84341	7	7265	7265;7276;7387;7420;7582;7659;7697		45.952	20.502	1	2127000	+		42749	27175	28552	28565	48522;48523;48524;48525;48526;48527;48528	48522					0.04243184505912723
PPRVRSGG	8	Unmodified	_PPRVRSGG_					0	0	0			REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.23699951171875	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.87479	2	6974	6974;7053		37.159	10.363	1	2012200	+		42750	27175	28552	28565	48529;48530	48529					0.04243184505912723
PPRVRSGG	8	Unmodified	_PPRVRSGG_					0	0	0			REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7462463378906	2	413.238119	824.461684	-1.8195	-0.0007519	-2.9548	-0.001221	-4.7743	-0.0019729	413.23630064649115	84.937	0.34577	85.113	84.963	85.308	0.17561					10	7	2	0	0	0	0.4196	1	8279	8279		23.042	0	1	35606	+		42751	27175	28552	28565	48531	48531					0.04243184505912723
PPRVRSGG	8	Unmodified	_PPRVRSGG_					0	0	0			REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7463073730469	2	413.238119	824.461684	-1.8209	-0.00075248	1.59	0.00065706	-0.23092	-9.5426E-05	413.23849338189547	84.306	0.55955	84.482	84.316	84.876	0.17561					15	12	3	0	0	0	0.4196	1	8245	8245		10.265	0	1	38083	+		42752	27175	28552	28565	48532	48532					0.04243184505912723
PPRVRSGG	8	Unmodified	_PPRVRSGG_					0	0	0			REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2374572753906	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.85277	7	6921	6921;7064;7073;7089;7327;7371;7420		51.335	16.135	1	1692300	+		42753	27175	28552	28565	48533;48534;48535;48536;48537;48538;48539	48533					0.04243184505912723
PPRVRSGG	8	Unmodified	_PPRVRSGG_					0	0	0			REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.238037109375	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.85277	2	7231	7144;7231		40.573	5.3719	1	1341700	+		42754	27175	28552	28565	48540;48541	48541					0.04243184505912723
PPRVRSGG	8	Unmodified	_PPRVRSGG_					0	0	0			REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	REV__ENST00000468090.5_1_21:45179541-45179850:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2378845214844	2	413.238119	824.461684	-0.091267	-3.7715E-05	0.27761	0.00011472	0.18635	7.7005E-05	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.87922	1	8832	8832		31.955	5.1588	1	1247200	+		42755	27175	28552	28565	48542	48542					0.04243184505912723
PPSACPPSRY	10	Unmodified	_PPSACPPSRY_					0	0	0		ENST00000261388.7_2_16:21170009-21172402:+|nuORF	ENST00000261388.7_2_16:21170009-21172402:+|nuORF	ENST00000261388.7_2_16:21170009-21172402:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.2667236328125	2	537.755484	1073.49641	0.38039	0.00020456	-3.8188	-0.0020536	-3.4384	-0.001849	537.752692929318	31.911	0.33329	31.905	31.66	31.993	-0.0061455					9	7	2	0	0	0	0.37624	1	1786	1786		42.396	5.237	1	10692			42756	9407	28553	28566	48543	48543					-0.037393604683074955
PPSAILTL	8	Unmodified	_PPSAILTL_					0	0	0			REV__nc|ENSG00000102977|Q96AP0-2|ACD	REV__nc|ENSG00000102977|Q96AP0-2|ACD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24847412109375	2	406.249829	810.485105	1.1516	0.00046786	-4.2235	-0.0017158	-3.0718	-0.0012479	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.88915	1	9274	9274		35.201	0	1	58759000	+		42757	17376	28554	28567	48544	48544					0.07228185499855044
PPSAIPPRGP	10	Unmodified	_PPSAIPPRGP_					0	0	0			REV__ENST00000526640.5_1_11:61732976-61735060:-|nuORF	REV__ENST00000526640.5_1_11:61732976-61735060:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7801208496094	2	494.782359	987.550165	-0.78615	-0.00038897	-3.2604	-0.0016132	-4.0465	-0.0020021	494.78060020608814	86.18	3.7368	86.627	85.355	89.092	0.44736					160	91	3	0	0	0	0.77314	1	10118	10118		40.778	5.1599	1	656610	+		42758	28216	28555	28568	48545	48545					0.05589180025708629
PPSARAGLPSA	11	Unmodified	_PPSARAGLPSA_					0	0	0			REV__nc|ENSG00000204842|Q99700|ATXN2	REV__nc|ENSG00000204842|Q99700|ATXN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2828369140625	2	512.282723	1022.55089	1.2711	0.00065114	-3.95	-0.0020235	-2.6789	-0.0013724	512.2806294768477	86.671	3.241	86.597	85.234	88.475	-0.074005					135	75	2	0	0	0	0.67778	1	8876	8876		35.152	1.2304	1	387010	+		42759	30163	28556	28569	48546	48546					0.040519746747463614
PPSARAPRRV	10	Unmodified	_PPSARAPRRV_					0	0	0		ENST00000588791.1_1_17:27442450-27447678:-|nuORF	ENST00000588791.1_1_17:27442450-27447678:-|nuORF	ENST00000588791.1_1_17:27442450-27447678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8302001953125	2	553.830706	1105.64686	2.0416	0.0011307	-3.0404	-0.0016839	-0.99881	-0.00055317	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.8651	1	9588	9588		25.574	1.3713	1	5457600			42760	14219	28557	28570	48547	48547					0.09826167305504896
PPSASRRRRR	10	Unmodified	_PPSASRRRRR_					0	0	0			REV__ENSG00000126461|ENST00000360565|SCAF1	REV__ENSG00000126461|ENST00000360565|SCAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8692626953125	2	619.868686	1237.72282	0.62564	0.00038782	0.61404	0.00038062	1.2397	0.00076844	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.80179	1	10181	10181		39.253	0.44669	1	4779100	+		42761	18701	28558	28571	48548	48548					0.11346564205632603
PPSASVRL	8	Unmodified	_PPSASVRL_					0	0	0			REV__ENST00000563856.1_1_16:88947348-88947540:-|nuORF	REV__ENST00000563856.1_1_16:88947348-88947540:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.7426452636719	2	413.742702	825.470852	-0.14626	-6.0512E-05	0.2076	8.5892E-05	0.061341	2.538E-05	413.74285605414093	31.009	0.66088	31.089	30.767	31.428	0.079834					26	14	2	0	0	0	0.93786	1	2069	2069		53.351	10.877	1	147880	+		42762	28828	28559	28572	48549	48549					0.05113533071573784
PPSDIVWTC	9	Unmodified	_PPSDIVWTC_					0	0	0			REV__ENSG00000107611|ENST00000377833|CUBN	REV__ENSG00000107611|ENST00000377833|CUBN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8055114746094	2	509.239135	1016.46372	-0.73772	-0.00037567	-2.6253	-0.0013369	-3.363	-0.0017126	509.237598110326	89.509	0.45875	89.98	89.681	90.139	0.47068					18	10	2	0	0	0	0.20789	1	10627	10627		24.203	0	1	193770	+		42763	17666	28560	28573	48550	48550					-0.04385567591180006
PPSFRSQLFI	10	Unmodified	_PPSFRSQLFI_					0	0	0			REV__nc|ENSG00000167889|Q3V5L5-5|MGAT5B	REV__nc|ENSG00000167889|Q3V5L5-5|MGAT5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.3330688476562	2	596.329673	1190.64479	1.5761	0.00093988	3.9311	0.0023442	5.5072	0.0032841	596.3318720869813	95.913	2.9437	96.333	95.271	98.215	0.4205					211	71	4	0	0	0	0.51302	1	11504	11504		54.776	12.38	1	1079900	+		42764	15667	28561	28574	48551	48551					0.05709693777043867
PPSGLRQKLSR	11	Unmodified	_PPSGLRQKLSR_					0	0	0		ENSG00000272031|ENST00000606888|ANKRD34A	ENSG00000272031|ENST00000606888|ANKRD34A	ENSG00000272031|ENST00000606888|ANKRD34A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8688354492188	2	619.870028	1237.7255	-0.30632	-0.00018988	-0.95589	-0.00059253	-1.2622	-0.00078241	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.66009	1	9925	9925		37.508	5.9784	1	2103100			42765	8982	28562	28575	48552	48552					0.11614974819917734
PPSGLRQKLSR	11	Unmodified	_PPSGLRQKLSR_					0	0	0		ENSG00000272031|ENST00000606888|ANKRD34A	ENSG00000272031|ENST00000606888|ANKRD34A	ENSG00000272031|ENST00000606888|ANKRD34A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8687744140625	2	619.870028	1237.7255	2.0624	0.0012784	-3.3055	-0.002049	-1.2431	-0.00077056	619.8678492982955	94.196	2.767	94.137	92.294	95.061	-0.059212					208	65	4	0	0	0	0.53361	1	10032	10032		49.536	5.4192	1	2061200			42766	8982	28562	28575	48553	48553					0.11614974819917734
PPSGLRQKLSR	11	Unmodified	_PPSGLRQKLSR_					0	0	0		ENSG00000272031|ENST00000606888|ANKRD34A	ENSG00000272031|ENST00000606888|ANKRD34A	ENSG00000272031|ENST00000606888|ANKRD34A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.869384765625	2	619.870028	1237.7255	0.62564	0.00038782	-1.552	-0.00096205	-0.92638	-0.00057423	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.732	1	10205	10205		26.063	1.5442	1	4779100			42767	8982	28562	28575	48554	48554					0.11614974819917734
PPSGLRQKLSR	11	Unmodified	_PPSGLRQKLSR_					0	0	0		ENSG00000272031|ENST00000606888|ANKRD34A	ENSG00000272031|ENST00000606888|ANKRD34A	ENSG00000272031|ENST00000606888|ANKRD34A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.86865234375	2	619.870028	1237.7255	-1.2246	-0.00075908	0.04402	2.7286E-05	-1.1806	-0.0007318	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.70584	1	9475	9475		30.569	0.25114	1	3118800			42768	8982	28562	28575	48555	48555					0.11614974819917734
PPSGRRLS	8	Unmodified	_PPSGRRLS_					0	0	0		nc|ENSG00000105520|Q96GM1-2|PLPPR2;ENSG00000105520|ENST00000688289|PLPPR2;nc|ENSG00000105520|Q96GM1|PLPPR2;ENST00000588360.1_1_19:11471945-11474676:+|nuORF	nc|ENSG00000105520|Q96GM1-2|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2519226074219	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.89494	1	7409	7409		37.159	1.5408	1	2743300			42769	2223	28563	28576	48556	48556					0.048394536773685104
PPSHTSLGL	9	Unmodified	_PPSHTSLGL_					0	0	0		ENST00000468135.5_1_1:32538612-32542206:+|nuORF	ENST00000468135.5_1_1:32538612-32542206:+|nuORF	ENST00000468135.5_1_1:32538612-32542206:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.7449035644531	2	454.745442	907.476331	-0.13391	-6.0896E-05	-0.83302	-0.00037881	-0.96693	-0.00043971	454.7449043410658	103.95	1.6099	103.94	103.26	104.87	-0.0035706					76	38	3	0	0	0	0.77546	1	11244	11244		31.955	2.8053	1	761390			42770	12171	28564	28577	48557	48557					0.018892118633857535
PPSHTSLGL	9	Unmodified	_PPSHTSLGL_					0	0	0		ENST00000468135.5_1_1:32538612-32542206:+|nuORF	ENST00000468135.5_1_1:32538612-32542206:+|nuORF	ENST00000468135.5_1_1:32538612-32542206:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	454.7452697753906	2	454.745442	907.476331	-1.7624	-0.00080143	0.73402	0.00033379	-1.0283	-0.00046763	454.7456677884031	103.99	1.1163	104.08	103.63	104.75	0.093857					50	27	3	0	0	0	0.58151	2	10961	10961;10973		47.916	5.4411	1	257420			42771	12171	28564	28577	48558;48559	48558					0.018892118633857535
PPSIGNRKLTR	11	Unmodified	_PPSIGNRKLTR_					0	0	0			REV__ENST00000427391.1_1_X:130964423-130964573:-|nuORF	REV__ENST00000427391.1_1_X:130964423-130964573:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8689575195312	2	619.870028	1237.7255	-0.2143	-0.00013284	-0.85851	-0.00053217	-1.0728	-0.000665	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.7342	1	9442	9442		25.574	5.5773	1	1169100	+		42772	26561	28565	28578	48560	48560					0.11614974819917734
PPSIGNRKLTR	11	Unmodified	_PPSIGNRKLTR_					0	0	0			REV__ENST00000427391.1_1_X:130964423-130964573:-|nuORF	REV__ENST00000427391.1_1_X:130964423-130964573:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8694458007812	2	619.870028	1237.7255	1.6172	0.0010025	-2.8457	-0.001764	-1.2285	-0.00076151	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.72106	1	11156	11156		28.081	0	1	1541100	+		42773	26561	28565	28578	48561	48561					0.11614974819917734
PPSIIPTD	8	Unmodified	_PPSIIPTD_					0	0	0			REV__nc|ENSG00000105388|P06731-2|CEACAM5	REV__nc|ENSG00000105388|P06731-2|CEACAM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2269592285156	2	420.229094	838.443634	0.089833	3.775E-05	-2.9174	-0.001226	-2.8276	-0.0011882	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.884	1	8085	8085		33.516	0	1	888480	+		42774	17533	28566	28579	48562	48562					0.017950047405179248
PPSKDWLRPL	10	Unmodified	_PPSKDWLRPL_					0	0	0			REV__ENST00000334530.9_2_8:21995727-21995799:-|nuORF	REV__ENST00000334530.9_2_8:21995727-21995799:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.8470458984375	2	604.842948	1207.67134	1.0466	0.00063305	4.3415	0.0026259	5.3881	0.003259	604.845452875801	96.207	3.1756	96.438	95.308	98.483	0.23103					209	74	4	0	0	0	0.85939	1	9908	9908		23.042	2.0956	1	585990	+		42775	25158	28567	28580	48563	48563					0.07581382668377046
PPSKQLYR	8	Unmodified	_PPSKQLYR_					0	0	0			REV__L1PA11_dup257|chr1:220255199-220257096:+|6.83625221169232|0.4810012897383803|3.83|63.0|19|1|sense	REV__L1PA11_dup257|chr1:220255199-220257096:+|6.83625221169232|0.4810012897383803|3.83|63.0|19|1|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.78082275390625	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.9295	1	8308	8308		55.504	23.549	1	385180	+		42776	29543	28568	28581	48564	48564					0.05589180025708629
PPSLALIN	8	Unmodified	_PPSLALIN_					0	0	0			REV__ENST00000566701.5_1_1:155184905-155187601:-|nuORF	REV__ENST00000566701.5_1_1:155184905-155187601:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.74609375	2	412.747453	823.480354	-0.18726	-7.729E-05	-2.5941	-0.0010707	-2.7813	-0.001148	412.74629807731793	85.159	3.9764	85.226	83.424	87.4	0.067261					139	91	3	0	0	0	0.87922	1	8556	8556		31.955	5.1588	1	1290300	+		42777	22220	28569	28582	48565	48565					0.061553013571028714
PPSLGLEI	8	Unmodified	_PPSLGLEI_					0	0	0		ENST00000593362.1_1_19:49912247-49918391:+|nuORF;ENSG00000161609|ENST00000447857|KASH5	ENST00000593362.1_1_19:49912247-49918391:+|nuORF	ENST00000593362.1_1_19:49912247-49918391:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2375793457031	2	413.239461	824.46437	-1.33	-0.0005496	-1.1028	-0.00045573	-2.4328	-0.0010053	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.86791	1	7255	7255		28.254	0	1	895630			42778	5643	28570	28583	48566	48566					0.04511595120175116
PPSLKEKKVK	10	Unmodified	_PPSLKEKKVK_					0	0	0		ENST00000494783.1_1_9:139397150-139399267:-|nuORF	ENST00000494783.1_1_9:139397150-139399267:-|nuORF	ENST00000494783.1_1_9:139397150-139399267:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3662109375	2	577.368798	1152.72304	-0.31736	-0.00018324	-3.4769	-0.0020075	-3.7943	-0.0021907	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.80179	1	10486	10486		39.253	1.4413	1	6617600			42779	12756	28571	28584	48567	48567					0.15279126362247553
PPSLLPES	8	Unmodified	_PPSLLPES_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.227294921875	2	420.229094	838.443634	-1.3082	-0.00054975	-1.524	-0.00064043	-2.8322	-0.0011902	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.88915	1	7262	7262		35.201	0	1	419890	+		42780	21394	28572	28585	48568	48568					0.017950047405292935
PPSLPLVL	8	Unmodified	_PPSLPLVL_					0	0	0			REV__ENST00000595335.5_1_19:57874916-57879933:+|nuORF	REV__ENST00000595335.5_1_19:57874916-57879933:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2978515625	2	418.268022	834.521491	-1.821	-0.00076168	1.588	0.00066423	-0.23299	-9.7452E-05	418.26872597919635	72.672	0.4322	72.803	72.557	72.989	0.13145					20	14	2	0	0	0	0.4196	1	6663	6663		15.636	0	1	75014	+		42781	29246	28573	28586	48569	48569					0.09761062396557918
PPSLPTVVKNV	11	Unmodified	_PPSLPTVVKNV_					0	0	0			REV__ENSG00000115414|ENST00000354785|FN1	REV__ENSG00000115414|ENST00000354785|FN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8428344726562	2	575.845156	1149.67576	-0.99734	-0.00057431	-2.9254	-0.0016846	-3.9227	-0.0022589	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.68532	1	9574	9574		33.922	8.4715	1	5638300	+		42782	18116	28574	28587	48570	48570					0.10690847091291289
PPSLPTVVKNV	11	Unmodified	_PPSLPTVVKNV_					0	0	0			REV__ENSG00000115414|ENST00000354785|FN1	REV__ENSG00000115414|ENST00000354785|FN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8425903320312	2	575.845156	1149.67576	-1.368	-0.00078773	-2.557	-0.0014725	-3.925	-0.0022602	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.67778	1	9455	9455		35.152	8.1047	1	6121300	+		42783	18116	28574	28587	48571	48571					0.10690847091291289
PPSLYHKIKLN	11	Unmodified	_PPSLYHKIKLN_					0	0	0			REV__ENST00000551855.1_1_12:39120300-39161507:-|nuORF	REV__ENST00000551855.1_1_12:39120300-39161507:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2563781738281	3	437.259079	1308.75541	-1.4866	-0.00065002	-2.4798	-0.0010843	-3.9663	-0.0017343	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.76579	1	10225	10225		18.531	0.69791	1	981430	+		42784	28613	28575	28588	48572	48572					0.11337913765282792
PPSPAQAFPT	10	Unmodified	_PPSPAQAFPT_					0	0	0		ENST00000536889.1_1_X:102565527-102565842:-|nuORF	ENST00000536889.1_1_X:102565527-102565842:-|nuORF	ENST00000536889.1_1_X:102565527-102565842:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7555236816406	2	506.758549	1011.50255	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.581	1	28.542	28.042	29.042	-0.039907								0	0	0	0.45132	1	1451	1451		36.447	2.9312	1				42785	13442	28576	28589	48573	48573					-0.0027451896515913177
PPSPHFHTP	9	Unmodified	_PPSPHFHTP_					0	0	0			REV__nc|ENSG00000095970|Q9NZC2-3|TREM2	REV__nc|ENSG00000095970|Q9NZC2-3|TREM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.80743408203125	2	508.751059	1015.48756	-0.31173	-0.00015859	2.3403	0.0011906	2.0286	0.001032	508.7520511530794	82.621	0.41583	83.052	82.878	83.294	0.43108					16	9	2	0	0	0	0.20789	1	9590	9590		23.042	6.3375	1	161180	+		42786	29731	28577	28590	48574	48574					-0.019559660424874892
PPSPLRVPSI	10	Unmodified	_PPSPLRVPSI_					0	0	0			REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8169555664062	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.77314	2	8242	8230;8242		40.778	3.6191	1	859730	+		42787	25840	28578	28591	48575;48576	48576					0.09498308748334239
PPSPLRVPSI	10	Unmodified	_PPSPLRVPSI_					0	0	0			REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.81689453125	2	531.818941	1061.62333	-0.7527	-0.0004003	-3.1029	-0.0016502	-3.8556	-0.0020505	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.82886	6	8515	8479;8491;8515;8527;8695;8731		37.812	2.3803	1	2790600	+		42788	25840	28578	28591	48577;48578;48579;48580;48581;48582	48579					0.09498308748334239
PPSPLRVPSI	10	Unmodified	_PPSPLRVPSI_					0	0	0			REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8164672851562	2	531.818941	1061.62333	-0.033207	-1.766E-05	-3.353	-0.0017832	-3.3862	-0.0018009	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.70553	2	8734	8676;8734		44.377	5.1244	1	1254600	+		42789	25840	28578	28591	48583;48584	48584					0.09498308748334239
PPSPLRVPSI	10	Unmodified	_PPSPLRVPSI_					0	0	0			REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8167724609375	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.67571	3	8915	8915;8951;8963		45.972	3.6142	1	4208000	+		42790	25840	28578	28591	48585;48586;48587	48585					0.09498308748334239
PPSPLRVPSI	10	Unmodified	_PPSPLRVPSI_					0	0	0			REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8168334960938	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.67571	3	8617	8425;8592;8617		45.972	15.228	1	1422300	+		42791	25840	28578	28591	48588;48589;48590	48590					0.09498308748334239
PPSPLRVPSI	10	Unmodified	_PPSPLRVPSI_					0	0	0			REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.81689453125	2	531.818941	1061.62333	-0.04786	-2.5453E-05	-3.9998	-0.0021272	-4.0476	-0.0021526	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.70553	4	8830	8675;8818;8830;8939		44.377	15.228	1	4916300	+		42792	25840	28578	28591	48591;48592;48593;48594	48593					0.09498308748334239
PPSPLRVPSI	10	Unmodified	_PPSPLRVPSI_					0	0	0			REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8168334960938	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.70553	3	8687	8650;8687;8794		44.377	13.874	1	4022300	+		42793	25840	28578	28591	48595;48596;48597	48596					0.09498308748334239
PPSPLRVPSI	10	Unmodified	_PPSPLRVPSI_					0	0	0			REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.81640625	2	531.818941	1061.62333	0.49482	0.00026316	-4.4068	-0.0023436	-3.912	-0.0020805	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.67571	1	10179	10179		45.972	0	1	1227700	+		42794	25840	28578	28591	48598	48598					0.09498308748334239
PPSPLRVPSI	10	Unmodified	_PPSPLRVPSI_					0	0	0			REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	REV__ENST00000376621.7_1_6:30524128-30524182:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8173828125	2	531.818941	1061.62333	-1.264	-0.00067223	-2.5284	-0.0013447	-3.7925	-0.0020169	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.70553	3	10321	10321;10333;10428		44.377	8.7492	1	4586300	+		42795	25840	28578	28591	48599;48600;48601	48599					0.09498308748334239
PPSPLVPRLS	10	Unmodified	_PPSPLVPRLS_					0	0	0			REV__ENST00000489942.1_1_6:3155224-3157697:-|nuORF	REV__ENST00000489942.1_1_6:3155224-3157697:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8167114257812	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.78666	1	8926	8926		40.058	4.9061	1	4208000	+		42796	27627	28579	28592	48602	48602					0.09498308748334239
PPSPLVPRLS	10	Unmodified	_PPSPLVPRLS_					0	0	0			REV__ENST00000489942.1_1_6:3155224-3157697:-|nuORF	REV__ENST00000489942.1_1_6:3155224-3157697:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8165283203125	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.8545	1	8437	8437		36.447	3.6343	1	1422300	+		42797	27627	28579	28592	48603	48603					0.09498308748334239
PPSPPAQL	8	Unmodified	_PPSPPAQL_					0	0	0			REV__nc|ENSG00000183248|Q9H6K5-2|PRR36;REV__nc|ENSG00000079337|O95398-2|RAPGEF3	REV__nc|ENSG00000183248|Q9H6K5-2|PRR36	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.7239074707031	2	403.723978	805.433404	0.40958	0.00016536	-0.076812	-3.1011E-05	0.33277	0.00013435	403.72380872064997	64.881	1.7093	65.005	63.854	65.563	0.12396					144	69	3	0	0	0	0.9295	1	5743	5743		55.504	0	1	1091100	+		42798	22588;29715	28580	28593	48604	48604					0.022904418059511045
PPSPPQAL	8	Unmodified	_PPSPPQAL_					0	0	0			REV__ENST00000325954.8_2_12:120972156-120972429:+|nuORF	REV__ENST00000325954.8_2_12:120972156-120972429:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.7239685058594	2	403.723978	805.433404	-1.8572	-0.00074981	2.1457	0.00086627	0.28846	0.00011646	403.7247227583041	64.772	1.8283	64.897	63.712	65.54	0.12545					133	73	3	0	0	0	0.92457	1	5709	5709		47.916	0	1	1035700	+		42799	25068	28581	28594	48605	48605					0.022904418059511045
PPSPPSVPELK	11	Unmodified	_PPSPPSVPELK_					0	0	0			REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3191528320312	2	574.321514	1146.62847	-1.0331	-0.00059332	-2.6119	-0.0015001	-3.645	-0.0020934	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.6493	1	9948	9948		38.754	2.3069	1	1380900	+		42800	23137	28582	28595	48606	48606					0.06102567820266813
PPSPRAVRRA	10	Unmodified	_PPSPRAVRRA_					0	0	0			REV__ENST00000320330.7_1_16:29827558-29827837:+|nuORF	REV__ENST00000320330.7_1_16:29827558-29827837:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.830322265625	2	553.830706	1105.64686	-1.4397	-0.00079733	0.48085	0.00026631	-0.95882	-0.00053102	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.86272	1	9076	9076		24.519	1.4767	1	5453100	+		42801	24996	28583	28596	48607	48607					0.09826167305527633
PPSPRLAPLA	10	Unmodified	_PPSPRLAPLA_					0	0	0		ENST00000553189.5_1_12:29689066-29935873:-|nuORF	ENST00000553189.5_1_12:29689066-29935873:-|nuORF	ENST00000553189.5_1_12:29689066-29935873:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8035888671875	2	509.805834	1017.59712	-1.4574	-0.000743	-2.7703	-0.0014123	-4.2277	-0.0021553	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.77314	1	8164	8164		40.778	0	1	920080			42802	13695	28584	28597	48608	48608					0.08902039576832976
PPSPSLVL	8	Unmodified	_PPSPSLVL_					0	0	0			REV__ENST00000295920.7_1_3:155588489-155621652:+|nuORF	REV__ENST00000295920.7_1_3:155588489-155621652:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2173156738281	2	405.242004	808.469455	-1.2169	-0.00049315	-1.3014	-0.00052737	-2.5183	-0.0010205	405.2413738816204	85.632	1.1166	85.632	85.052	86.169	0					53	25	3	0	0	0	0.4196	1	8182	8182		20.482	7.5226	1	147320	+		42803	24704	28585	28598	48609	48609					0.057558989827953155
PPSPSLVL	8	Unmodified	_PPSPSLVL_					0	0	0			REV__ENST00000295920.7_1_3:155588489-155621652:+|nuORF	REV__ENST00000295920.7_1_3:155588489-155621652:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	405.242004	808.469455	0.59513	0.00024117	-3.2439	-0.0013146	-2.6487	-0.0010734	405.24067819102066	85.224	1.2102	85.373	84.777	85.987	0.14856	-0.088387	-0.00069834	NaN	13.775	56	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206310	+		42804	24704	28585	28598							0.057558989827953155
PPSPSLVL	8	Unmodified	_PPSPSLVL_					0	0	0			REV__ENST00000295920.7_1_3:155588489-155621652:+|nuORF	REV__ENST00000295920.7_1_3:155588489-155621652:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	405.242004	808.469455	-0.46966	-0.00019033	-3.604	-0.0014605	-4.0737	-0.0016508	405.2404875432132	85.118	0.88017	85.565	85.355	86.235	0.44736	0.1041	-0.00099024	NaN	13.775	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	182740	+		42805	24704	28585	28598							0.057558989827953155
PPSPSLVLRP	10	Unmodified	_PPSPSLVLRP_					0	0	0			REV__ENST00000295920.7_1_3:155588489-155621652:+|nuORF	REV__ENST00000295920.7_1_3:155588489-155621652:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.85466	1	9095	9095		20.947	0.95016	1	4208000	+		42806	24704	28586	28599	48610	48610					0.09498308748334239
PPSPSLVLRP	10	Unmodified	_PPSPSLVLRP_					0	0	0			REV__ENST00000295920.7_1_3:155588489-155621652:+|nuORF	REV__ENST00000295920.7_1_3:155588489-155621652:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8168334960938	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.86763	1	8567	8567		26.693	3.6504	1	1422300	+		42807	24704	28586	28599	48611	48611					0.09498308748334239
PPSPTLVE	8	Unmodified	_PPSPTLVE_					0	0	0			REV__ENSG00000183246|ENST00000433039|RIMBP3C	REV__ENSG00000183246|ENST00000433039|RIMBP3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2259826660156	2	420.229094	838.443634	0.53933	0.00022664	-3.4769	-0.0014611	-2.9375	-0.0012344	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.86791	1	7754	7754		28.254	1.5614	1	678130	+		42808	22587	28587	28600	48612	48612					0.017950047405292935
PPSQKQRSIKR	11	Unmodified	_PPSQKQRSIKR_					0	0	0			REV__ENST00000437626.5_1_21:46548444-46591585:+|nuORF	REV__ENST00000437626.5_1_21:46548444-46591585:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.808349609375	3	442.265115	1323.77352	0.32832	0.0001452	0.31125	0.00013765	0.63957	0.00028286	442.2653017270532	18.933	0.74051	18.303	18.06	18.801	-0.6296					21	16	3	0	0	0	0.17729	1	519	519		23.378	5.5448	1	50137	+		42809	26710	28588	28601	48613	48613					0.12458048739972583
PPSQLGLI	8	Unmodified	_PPSQLGLI_					0	0	0			REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7462463378906	2	412.747453	823.480354	-1.8202	-0.00075129	-0.83652	-0.00034527	-2.6567	-0.0010966	412.7469769415949	84.864	3.004	85.04	83.072	86.076	0.17561					129	69	4	0	0	0	0.89457	1	8279	8279		37.028	0	1	1518200	+		42810	16637	28589	28602	48614	48614					0.06155301357091503
PPSRLPAAPL	10	Unmodified	_PPSRLPAAPL_					0	0	0			REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80377197265625	2	509.805834	1017.59712	-0.054339	-2.7702E-05	-4.0902	-0.0020852	-4.1445	-0.0021129	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.82886	3	8897	8609;8861;8897		37.812	4.5581	1	2906900	+		42811	29910	28590	28603	48615;48616;48617	48617					0.08902039576844345
PPSRLPAAPL	10	Unmodified	_PPSRLPAAPL_					0	0	0			REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8035888671875	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.86218	1	8488	8488		32.812	1.2826	1	2989000	+		42812	29910	28590	28603	48618	48618					0.08902039576844345
PPSSAFYG	8	Unmodified	_PPSSAFYG_					0	0	0		ENST00000397637.5_1_21:48055700-48056138:+|nuORF	ENST00000397637.5_1_21:48055700-48056138:+|nuORF	ENST00000397637.5_1_21:48055700-48056138:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.1941223144531	2	413.192511	824.370469	2.528	0.0010445	0.35782	0.00014785	2.8858	0.0011924	413.1925490682729	78.857	3.5308	78.908	78.449	81.979	0.051674					175	98	2	0	0	0	0.86791	1	7794	7794		28.254	0	1	994890			42813	11156	28591	28604	48619	48619					-0.04874123982085621
PPSSPLEL	8	Unmodified	_PPSSPLEL_					0	0	0		nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2275085449219	2	420.229094	838.443634	0.089833	3.775E-05	-2.9174	-0.001226	-2.8276	-0.0011882	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.88915	1	8158	8158		35.201	0	1	888480			42814	14941	28592	28605	48620	48620					0.017950047405179248
PPSSRAPLPP	10	Unmodified	_PPSSRAPLPP_					0	0	0			REV__ENSG00000130701|ENST00000252998|RBBP8NL	REV__ENSG00000130701|ENST00000252998|RBBP8NL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8033752441406	2	509.787641	1017.56073	-0.3763	-0.00019183	-0.63471	-0.00032357	-1.011	-0.0005154	510.2879389754041	86.989	0.17268	87.183	87.105	87.277	0.19379					5	3	2	0	0	0	0.37624	1	8578	8578		39.253	0	1	53856	+		42815	18893	28593	28606	48621	48621					0.05265162680132107
PPSTPAAPKRR	11	Unmodified	_PPSTPAAPKRR_					0	0	0		nc|ENSG00000115310|Q9NQC3-2|RTN4;nc|ENSG00000115310|Q9NQC3-5|RTN4;ENSG00000115310|ENST00000337526|RTN4	nc|ENSG00000115310|Q9NQC3-2|RTN4	nc|ENSG00000115310|Q9NQC3-2|RTN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3423461914062	2	589.343646	1176.67274	2.2135	0.0013045	-3.7891	-0.0022331	-1.5756	-0.00092856	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.73893	1	9641	9641		24.519	0.99649	1	5579200			42816	2833	28594	28607	48622	48622					0.09147016757128767
PPSTRPPPWL	10	Unmodified	_PPSTRPPPWL_					0	0	0		ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3197021484375	2	574.316566	1146.61858	2.1223	0.0012189	2.8994	0.0016652	5.0218	0.0028841	574.3181422905453	94.479	4.1031	94.419	93.372	97.475	-0.059204					230	96	5	0	0	0	0.54701	1	10026	10026		52.937	0	1	1734300			42817	2626	28595	28608	48623	48623					0.05113424605565342
PPSVPSVAKKP	11	Unmodified	_PPSVPSVAKKP_					0	0	0			REV__ENSG00000185775|ENST00000332857|SPATA31A6	REV__ENSG00000185775|ENST00000332857|SPATA31A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8298950195312	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.66929	1	9000	9000		36.447	2.5251	1	1489800	+		42818	22791	28596	28609	48624	48624					0.10094577919812764
PPSVPSVAKKP	11	Unmodified	_PPSVPSVAKKP_					0	0	0			REV__ENSG00000185775|ENST00000332857|SPATA31A6	REV__ENSG00000185775|ENST00000332857|SPATA31A6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8300170898438	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.7342	1	8725	8725		25.574	3.6142	1	1844500	+		42819	22791	28596	28609	48625	48625					0.10094577919812764
PPSVPSVAKKP	11	Unmodified	_PPSVPSVAKKP_					0	0	0			REV__ENSG00000185775|ENST00000332857|SPATA31A6	REV__ENSG00000185775|ENST00000332857|SPATA31A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8303833007812	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.61369	1	10625	10625		42.864	0.46813	1	5911200	+		42820	22791	28596	28609	48626	48626					0.10094577919812764
PPTAHPAK	8	Unmodified	_PPTAHPAK_					0	0	0		nc|ENSG00000169085|Q8TAG6-2|VXN;ENST00000485639.1_1_8:67405886-67426403:+|nuORF;ENST00000484919.5_1_8:67405883-67422509:+|nuORF;ENSG00000169085|ENST00000305454|VXN	nc|ENSG00000169085|Q8TAG6-2|VXN	nc|ENSG00000169085|Q8TAG6-2|VXN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.8014831542969	2	409.729595	817.444637	1.576	0.00064575	0.14739	6.0392E-05	1.7234	0.00070614	409.7296534229295	19.678	0.37757	19.209	19.019	19.397	-0.46967					11	7	2	0	0	0	0.4196	1	564	564		42.474	14.592	1	31287			42821	6468	28597	28610	48627	48627					0.028612639000812123
PPTAHPAK	8	Unmodified	_PPTAHPAK_					0	0	0		nc|ENSG00000169085|Q8TAG6-2|VXN;ENST00000485639.1_1_8:67405886-67426403:+|nuORF;ENST00000484919.5_1_8:67405883-67422509:+|nuORF;ENSG00000169085|ENST00000305454|VXN	nc|ENSG00000169085|Q8TAG6-2|VXN	nc|ENSG00000169085|Q8TAG6-2|VXN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.8014221191406	2	409.729595	817.444637	0.027925	1.1442E-05	1.8342	0.00075153	1.8621	0.00076297	409.73020421397695	19.853	0.45997	19.223	18.937	19.397	-0.6296					15	9	2	0	0	0	0.4196	1	596	596		35.201	19.564	1	44917			42822	6468	28597	28610	48628	48628					0.028612639000812123
PPTAPGRR	8	Unmodified	_PPTAPGRR_					0	0	0		ENST00000357871.6_1_Y:14514177-14532211:-|nuORF	ENST00000357871.6_1_Y:14514177-14532211:-|nuORF	ENST00000357871.6_1_Y:14514177-14532211:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.24603271484375	2	426.245944	850.477334	0.61593	0.00026254	-0.31325	-0.00013352	0.30267	0.00012901	426.24572360202285	87.518	4.0945	87.668	85.602	89.696	0.14956					180	96	4	0	0	0	0.884	1	8642	8642		33.516	0	1	3688500			42823	10398	28598	28611	48629	48629					0.046114710229517186
PPTAPIAGR	9	Unmodified	_PPTAPIAGR_					0	0	0			REV__ENST00000524819.5_1_11:62529062-62529592:+|nuORF	REV__ENST00000524819.5_1_11:62529062-62529592:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.25347900390625	2	440.255977	878.497401	-1.4879	-0.00065508	-0.26291	-0.00011575	-1.7509	-0.00077082	440.2558124081508	66.549	0.68278	66.682	66.36	67.042	0.13326					60	29	3	0	0	0	0.78536	1	5936	5936		29.15	0	1	243800	+		42824	28174	28599	28612	48630	48630					0.05329221962892916
PPTAPTTKG	9	Unmodified	_PPTAPTTKG_					0	0	0			REV__ENST00000269499.9_2_18:60190376-60190661:+|nuORF	REV__ENST00000269499.9_2_18:60190376-60190661:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.23663330078125	2	435.239993	868.465432	0.29815	0.00012977	0.0051889	2.2584E-06	0.30334	0.00013203	435.2398090871386	28.451	0.60146	28.473	28.102	28.704	0.021948					53	31	2	0	0	0	0.73802	1	1155	1155		37.812	5.8567	1	146160	+		42825	24526	28600	28613	48631	48631					0.025938094890989305
PPTARALLHAS	11	Unmodified	_PPTARALLHAS_					0	0	0			REV__ENST00000397555.3_1_19:13988417-13991381:+|nuORF	REV__ENST00000397555.3_1_19:13988417-13991381:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.0238037109375	2	567.324922	1132.63529	6.4954	0.003685	2.7438	0.0015567	9.2393	0.0052417	567.3263634214887	111.48	0.29791	111.53	111.39	111.69	0.049088					19	10	2	0	0	0	0.69248	1	13517	13517		32.751	3.601	1	815390	+		42826	26170	28601	28614	48632	48632					0.07427925491515452
PPTARALLHAS	11	Unmodified	_PPTARALLHAS_					0	0	0			REV__ENST00000397555.3_1_19:13988417-13991381:+|nuORF	REV__ENST00000397555.3_1_19:13988417-13991381:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	567.324922	1132.63529	2.2504	0.0012767	6.455	0.0036621	8.7054	0.0049388	567.3285407413932	111.59	0.14281	111.63	111.55	111.69	0.041832	0.054539	0.0020304	NaN	32.751	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	444830	+		42827	26170	28601	28614							0.07427925491515452
PPTARALLHAS	11	Unmodified	_PPTARALLHAS_					0	0	0			REV__ENST00000397555.3_1_19:13988417-13991381:+|nuORF	REV__ENST00000397555.3_1_19:13988417-13991381:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	567.324922	1132.63529	6.4954	0.003685	2.7438	0.0015567	9.2393	0.0052417	567.3263634214887	111.48	0.29791	111.53	111.39	111.69	0.049088	-0.054539	-0.0021804	NaN	32.751	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	815390	+		42828	26170	28601	28614							0.07427925491515452
PPTARTRA	8	Unmodified	_PPTARTRA_					0	0	0		ENST00000478241.6_2_12:56224399-56224693:+|nuORF	ENST00000478241.6_2_12:56224399-56224693:+|nuORF	ENST00000478241.6_2_12:56224399-56224693:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2515869140625	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87479	1	7674	7674		30.504	1.3336	1	2823900			42829	12380	28602	28615	48633	48633					0.048394536773685104
PPTGLRAVF	9	Unmodified	_PPTGLRAVF_					0	0	0		ENST00000585554.5_1_19:36235732-36236292:-|nuORF;ENST00000590650.1_1_19:36235732-36236187:-|nuORF;ENST00000586476.5_1_19:36235732-36236261:-|nuORF	ENST00000585554.5_1_19:36235732-36236292:-|nuORF	ENST00000585554.5_1_19:36235732-36236292:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2773132324219	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.78536	1	8105	8105		29.15	1.2673	1	7438100			42830	14150	28603	28616	48634	48634					0.0643408151404401
PPTGPPKLKN	10	Unmodified	_PPTGPPKLKN_					0	0	0			REV__ENSG00000171435|ENST00000339824|KSR2	REV__ENSG00000171435|ENST00000339824|KSR2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8270874023438	2	524.811116	1047.60768	-1.5342	-0.00080517	-2.5016	-0.0013129	-4.0358	-0.002118	524.8096713537257	99.193	0.53329	99.379	98.987	99.521	0.18582					19	12	2	0	0	0	0.37624	1	10219	10219		49.442	10.635	1	170220	+		42831	21726	28604	28617	48635	48635					0.08578022231267823
PPTGSESH	8	Unmodified	_PPTGSESH_					0	0	0			REV__ENST00000521682.5_1_8:144356964-144357361:+|nuORF	REV__ENST00000521682.5_1_8:144356964-144357361:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2485046386719	2	406.182675	810.350796	-0.18709	-7.5993E-05	-4.3048	-0.0017485	-4.4919	-0.0018245	406.1807617679305	88.573	0.7308	88.641	88.267	88.998	0.068161					29	17	3	0	0	0	0.4196	1	9033	9033		33.516	8.0654	1	98829	+		42832	28124	28605	28618	48636	48636					-0.06196499992847748
PPTIQPRA	8	Unmodified	_PPTIQPRA_					0	0	0		ENST00000475446.5_1_22:20004559-20035575:+|nuORF	ENST00000475446.5_1_22:20004559-20035575:+|nuORF	ENST00000475446.5_1_22:20004559-20035575:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2547607421875	2	440.255977	878.497401	0.43968	0.00019357	-1.7375	-0.00076495	-1.2978	-0.00057137	440.2550261626726	67.317	0.79267	67.444	67.122	67.915	0.12748					63	30	3	0	0	0	0.79929	1	5998	5998		18.324	1.6194	1	418260			42833	12323	28606	28619	48637	48637					0.05329221962892916
PPTISLRS	8	Unmodified	_PPTISLRS_					0	0	0		nc|ENSG00000161681|Q9Y566-2|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1;ENSG00000161681|ENST00000293441|SHANK1	nc|ENSG00000161681|Q9Y566-2|SHANK1	nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7546081542969	2	435.75581	869.497067	-0.098992	-4.3136E-05	-2.3128	-0.0010078	-2.4118	-0.0010509	435.75462599362015	78.181	0.86222	78.586	77.977	78.839	0.40531					45	20	3	0	0	0	0.81184	1	8926	8926		19.997	0.6368	1	792420			42834	5650	28607	28620	48638	48638					0.0570980224304094
PPTKPAMPP	9	Unmodified	_PPTKPAMPP_					0	0	0			REV__ENSG00000166317|ENST00000394810|SYNPO2L	REV__ENSG00000166317|ENST00000394810|SYNPO2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2546081542969	2	468.254588	934.494624	0.60478	0.00028319	-0.093062	-4.3577E-05	0.51172	0.00023962	468.25441943244317	81.627	3.5592	81.77	80.781	84.34	0.14352					144	82	2	0	0	0	0.69624	1	7796	7796		40.778	1.972	1	205460	+		42835	21279	28608	28621	48639	48639					0.024756305137316303
PPTKVPNQLL	10	Unmodified	_PPTKVPNQLL_					0	0	0			REV__ENST00000367081.7_1_6:159084018-159084051:+|nuORF	REV__ENST00000367081.7_1_6:159084018-159084051:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8302612304688	2	553.832049	1105.64954	0.37109	0.00020552	-3.8764	-0.0021469	-3.5053	-0.0019414	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.86587	1	10492	10492		29.17	0.020503	1	1786500	+		42836	25548	28609	28622	48640	48640					0.10094577919812764
PPTLALKQPP	10	Unmodified	_PPTLALKQPP_					0	0	0		ENST00000221566.6_1_19:2754860-2755205:-|nuORF	ENST00000221566.6_1_19:2754860-2755205:-|nuORF	ENST00000221566.6_1_19:2754860-2755205:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.3185424804688	2	531.321317	1060.62808	-0.6637	-0.00035264	-2.8491	-0.0015138	-3.5128	-0.0018664	531.319555565115	95.322	2.6544	95.322	94.812	97.466	0					162	61	5	0	0	0	0.85694	1	9562	9562		21.96	1.013	1	1864100			42837	9172	28610	28623	48641	48641					0.10019192891104467
PPTLESIL	8	Unmodified	_PPTLESIL_					0	0	0		nc|ENSG00000156931|Q8N3P4-2|VPS8;nc|ENSG00000156931|Q8N3P4-3|VPS8;ENSG00000156931|ENST00000625842|VPS8	nc|ENSG00000156931|Q8N3P4-2|VPS8	nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2515869140625	2	435.252569	868.490584	0.25164	0.00010953	-3.1544	-0.0013729	-2.9027	-0.0012634	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.86791	3	8986	8986;9361;9409		35.201	4.0515	1	2235800			42838	5402	28611	28624	48642;48643;48644	48642					0.05107864291676378
PPTLGHIIEI	10	Unmodified	_PPTLGHIIEI_					0	0	0		ENST00000273221.8_2_3:12940565-12940730:-|nuORF	ENST00000273221.8_2_3:12940565-12940730:-|nuORF	ENST00000273221.8_2_3:12940565-12940730:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.31640625	2	545.318774	1088.623	-1.3538	-0.00073823	-2.3594	-0.0012866	-3.7132	-0.0020249	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.46422	1	10314	10314		58.782	5.8453	1	5184000			42839	9574	28612	28625	48645	48645					0.08222889028479585
PPTLILTD	8	Unmodified	_PPTLILTD_					0	0	0		ENST00000547221.1_3_6:31106167-31107440:+|nuORF	ENST00000547221.1_3_6:31106167-31107440:+|nuORF	ENST00000547221.1_3_6:31106167-31107440:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2516784667969	2	435.252569	868.490584	-0.32142	-0.0001399	-2.6219	-0.0011412	-2.9433	-0.0012811	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.884	1	9351	9351		33.516	5.2613	1	2020200			42840	13600	28613	28626	48646	48646					0.05107864291653641
PPTLSSLR	8	Unmodified	_PPTLSSLR_					0	0	0			REV__chr1:16978314-16980951|27|39.74|0.22|7.51|-|0|TE_info:MIRc,MIRc_dup612,MIR,SINE,donor,-,16980951,16981020|MFAP2,None|1	REV__chr1:16978314-16980951|27|39.74|0.22|7.51|-|0|TE_info:MIRc,MIRc_dup612,MIR,SINE,donor,-,16980951,16981020|MFAP2,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.755126953125	2	435.75581	869.497067	-0.098992	-4.3136E-05	-2.3128	-0.0010078	-2.4118	-0.0010509	435.75462599362015	78.181	0.86222	78.586	77.977	78.839	0.40531					45	20	3	0	0	0	0.884	1	8904	8904		33.516	1.5607	1	792420	+		42841	15425	28614	28627	48647	48647					0.0570980224304094
PPTLSSLR	8	Unmodified	_PPTLSSLR_					0	0	0			REV__chr1:16978314-16980951|27|39.74|0.22|7.51|-|0|TE_info:MIRc,MIRc_dup612,MIR,SINE,donor,-,16980951,16981020|MFAP2,None|1	REV__chr1:16978314-16980951|27|39.74|0.22|7.51|-|0|TE_info:MIRc,MIRc_dup612,MIR,SINE,donor,-,16980951,16981020|MFAP2,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.7545166015625	2	435.75581	869.497067	0.19203	8.3677E-05	-3.1627	-0.0013782	-2.9707	-0.0012945	435.7543509349436	78.035	1.1687	78.598	77.699	78.868	0.56332					54	27	3	0	0	0	0.87479	1	8923	8923		30.504	3.7075	1	812270	+		42842	15425	28614	28627	48648	48648					0.0570980224304094
PPTMHCSSPP	10	Unmodified	_PPTMHCSSPP_					0	0	0			REV__ENST00000301453.7_1_11:63765020-63765272:+|nuORF	REV__ENST00000301453.7_1_11:63765020-63765272:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.228515625	2	527.228245	1052.44194	1.5744	0.00083009	1.4529	0.00076604	3.0274	0.0015961	527.2289853109975	89.943	0.64899	90.394	90.255	90.904	0.45058					29	16	2	0	0	0	0.8608	1	10646	10646		34.173	2.2177	1	1029900	+		42843	24764	28615	28628	48649	48649					-0.08218695611390103
PPTPRRPASVN	11	Unmodified	_PPTPRRPASVN_					0	0	0		nc|ENSG00000289720|Q96J02|ITCH;ENSG00000078747|ENST00000374864|ITCH;nc|ENSG00000289720|Q96J02-3|ITCH	nc|ENSG00000289720|Q96J02|ITCH	nc|ENSG00000289720|Q96J02|ITCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3330078125	2	596.333279	1190.652	-0.57959	-0.00034563	-0.049534	-2.9539E-05	-0.62912	-0.00037517	596.3331084008277	96.35	3.5496	96.416	95.306	98.855	0.06591					255	82	4	0	0	0	0.72739	1	10200	10200		27.047	0	1	1242500			42844	1406	28616	28629	48650	48650					0.06430426377482945
PPTRGTKGGG	10	Unmodified	_PPTRGTKGGG_					0	0	0		ENST00000586790.5_1_19:56159538-56160159:+|nuORF	ENST00000586790.5_1_19:56159538-56160159:+|nuORF	ENST00000586790.5_1_19:56159538-56160159:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.25323486328125	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.86218	1	7974	7974		32.812	3.6424	1	1449300			42845	14178	28617	28630	48651	48651					0.02719132469201213
PPTRGTKGGG	10	Unmodified	_PPTRGTKGGG_					0	0	0		ENST00000586790.5_1_19:56159538-56160159:+|nuORF	ENST00000586790.5_1_19:56159538-56160159:+|nuORF	ENST00000586790.5_1_19:56159538-56160159:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.25384521484375	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.8651	1	8297	8297		25.574	3.6142	1	1324500			42846	14178	28617	28630	48652	48652					0.02719132469201213
PPTRLFQV	8	Unmodified	_PPTRLFQV_					0	0	0		nc|ENSG00000006747|Q9Y6U3-3|SCIN;nc|ENSG00000006747|Q9Y6U3-2|SCIN;ENSG00000006747|ENST00000297029|SCIN	nc|ENSG00000006747|Q9Y6U3-3|SCIN	nc|ENSG00000006747|Q9Y6U3-3|SCIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2779235839844	2	479.279452	956.544351	-1.5678	-0.00075141	-2.7191	-0.0013032	-4.2869	-0.0020546	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.87064	1	8410	8410		29.15	1.2673	1	6441000			42847	713	28618	28631	48653	48653					0.0643408151404401
PPTRPRPK	8	Unmodified	_PPTRPRPK_					0	0	0			REV__nc|ENSG00000164972|Q8NCR6-2|SPMIP6	REV__nc|ENSG00000164972|Q8NCR6-2|SPMIP6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2544250488281	2	474.790518	947.566484	0.98246	0.00046646	-2.0601	-0.00097814	-1.0777	-0.00051168	474.7896318863694	22.379	0.53572	21.961	21.695	22.23	-0.41879					17	11	2	0	0	0	0.4196	1	918	918		9.7057	0	1	38100	+		42848	29998	28619	28632	48654	48654					0.09060305982472983
PPTRQLVF	8	Unmodified	_PPTRQLVF_					0	0	0			REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|43|3|sense	REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|43|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2774963378906	2	479.279452	956.544351	-1.0919	-0.00052333	-3.0273	-0.0014509	-4.1192	-0.0019742	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.87922	1	8216	8216		31.955	3.7006	1	4644500	+		42849	29524	28620	28633	48655	48655					0.0643408151404401
PPTRQLVF	8	Unmodified	_PPTRQLVF_					0	0	0			REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|43|3|sense	REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|43|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2775573730469	2	479.279452	956.544351	-0.77651	-0.00037216	-3.5504	-0.0017016	-4.3269	-0.0020738	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.87922	1	8833	8833		31.955	0	1	7040000	+		42850	29524	28620	28633	48656	48656					0.0643408151404401
PPTRQLVF	8	Unmodified	_PPTRQLVF_					0	0	0			REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|43|3|sense	REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|43|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27764892578125	2	479.279452	956.544351	-1.5678	-0.00075141	-2.7191	-0.0013032	-4.2869	-0.0020546	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.87922	2	8435	8435;8471		31.955	0	1	6441000	+		42851	29524	28620	28633	48657;48658	48657					0.0643408151404401
PPTRQLVF	8	Unmodified	_PPTRQLVF_					0	0	0			REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|43|3|sense	REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|43|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2774963378906	2	479.279452	956.544351	0.29447	0.00014113	-4.2782	-0.0020505	-3.9838	-0.0019093	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.90465	1	9967	9967		40.573	1.7665	1	5642300	+		42852	29524	28620	28633	48659	48659					0.0643408151404401
PPTRQLVF	8	Unmodified	_PPTRQLVF_					0	0	0			REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|43|3|sense	REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|43|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2778015136719	2	479.279452	956.544351	-0.72512	-0.00034753	-3.4808	-0.0016683	-4.2059	-0.0020158	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.87922	1	9344	9344		31.955	1.6371	1	1822400	+		42853	29524	28620	28633	48660	48660					0.0643408151404401
PPVCEKAR	8	Unmodified	_PPVCEKAR_					0	0	0			REV__chr3:106926196-106927835|20|15.85|0.0|12.7|-|2|TE_info:HERVH-int,HERVH-int_dup1181,ERV1,LTR,acceptor,-,106925057,106926196|None,LINC00882|1	REV__chr3:106926196-106927835|20|15.85|0.0|12.7|-|2|TE_info:HERVH-int,HERVH-int_dup1181,ERV1,LTR,acceptor,-,106925057,106926196|None,LINC00882|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.27435302734375	2	450.242012	898.469472	0.49855	0.00022447	2.5625	0.0011538	3.0611	0.0013782	450.2427919279817	92.727	0.45277	93.173	92.989	93.442	0.44661					15	10	2	0	0	0	0.4196	1	11016	11016		29.15	17.639	1	85891	+		42854	15796	28621	28634	48661	48661					0.0161757571115686
PPVCKVNL	8	Unmodified	_PPVCKVNL_					0	0	0			REV__ENST00000539506.5_1_12:132269555-132269855:+|nuORF	REV__ENST00000539506.5_1_12:132269555-132269855:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2515563964844	2	435.249306	868.484059	1.6099	0.00070073	2.9528	0.0012852	4.5628	0.001986	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.86288	1	7783	7783		26.796	1.3459	1	3370400	+		42855	28450	28622	28635	48662	48662					0.04455647859299461
PPVCLKGSL	9	Unmodified	_PPVCLKGSL_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1;nc|ENSG00000166783|Q9Y4F3-6|MARF1;ENST00000548216.2_1_16:15729470-15733102:-|nuORF	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.263916015625	2	457.262413	912.510274	0.52869	0.00024175	3.5661	0.0016306	4.0948	0.0018724	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.77244	1	8214	8214		32.812	7.3622	1	4885100			42856	6228	28623	28636	48663	48663					0.05051917030777986
PPVCLKGSL	9	Unmodified	_PPVCLKGSL_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1;nc|ENSG00000166783|Q9Y4F3-6|MARF1;ENST00000548216.2_1_16:15729470-15733102:-|nuORF	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2635192871094	2	457.262413	912.510274	0.43756	0.00020008	3.6399	0.0016644	4.0774	0.0018645	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.77244	1	8078	8078		32.812	2.3088	1	4814400			42857	6228	28623	28636	48664	48664					0.05051917030777986
PPVDVLLHVT	10	Unmodified	_PPVDVLLHVT_					0	0	0			REV__nc|ENSG00000160712|P08887-2|IL6R	REV__nc|ENSG00000160712|P08887-2|IL6R	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.7918701171875	2	545.318774	1088.623	-0.91984	-0.0005016	-1.731	-0.00094395	-2.6508	-0.0014456	545.3176658746236	86.75	0.56947	87.204	86.735	87.304	0.45429					18	13	2	0	0	0	0.37624	1	10172	10172		20.947	4.2295	1	300000	+		42858	20734	28624	28637	48665	48665					0.08222889028479585
PPVETAVL	8	Unmodified	_PPVETAVL_					0	0	0		ENST00000337014.10_2_17:80398960-80400257:+|nuORF	ENST00000337014.10_2_17:80398960-80400257:+|nuORF	ENST00000337014.10_2_17:80398960-80400257:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2381286621094	2	413.239461	824.46437	-0.12335	-5.0972E-05	-2.6877	-0.0011107	-2.811	-0.0011616	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.86791	1	7864	7864		28.254	0.37203	1	1978800			42859	10181	28625	28638	48666	48666					0.04511595120197853
PPVFRVKD	8	Unmodified	_PPVFRVKD_					0	0	0		ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8	ENSG00000204962|ENST00000531613|PCDHA8	ENSG00000204962|ENST00000531613|PCDHA8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27752685546875	2	479.279452	956.544351	-0.098244	-4.7086E-05	-4.1769	-0.0020019	-4.2751	-0.002049	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.91977	1	8632	8632		45.952	12.436	1	6799600			42860	8503	28626	28639	48667	48667					0.0643408151404401
PPVFRVKD	8	Unmodified	_PPVFRVKD_					0	0	0		ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8	ENSG00000204962|ENST00000531613|PCDHA8	ENSG00000204962|ENST00000531613|PCDHA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2776184082031	2	479.279452	956.544351	0.29447	0.00014113	-4.2782	-0.0020505	-3.9838	-0.0019093	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.90465	1	9668	9668		40.573	7.057	1	5642300			42861	8503	28626	28639	48668	48668					0.0643408151404401
PPVFSKRI	8	Unmodified	_PPVFSKRI_					0	0	0		nc|ENSG00000150275|Q96QU1-6|PCDH15;ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000150275|Q96QU1-3|PCDH15;nc|ENSG00000150275|Q96QU1-4|PCDH15;nc|ENSG00000150275|Q96QU1|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2877197265625	2	472.28982	942.565087	-1.7052	-0.00080536	-2.8033	-0.001324	-4.5086	-0.0021293	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.87064	1	9851	9851		29.15	2.1022	1	40161000			42862	5061	28627	28640	48669	48669					0.09150671893701201
PPVGHIHL	8	Unmodified	_PPVGHIHL_					0	0	0			REV__nc|ENSG00000055208|Q9NYJ8-2|TAB2	REV__nc|ENSG00000055208|Q9NYJ8-2|TAB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25152587890625	2	435.253237	868.491922	-1.5606	-0.00067925	-2.838	-0.0012352	-4.3985	-0.0019145	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.84567	2	7463	7424;7463		33.493	5.2387	1	3322700	+		42863	16410	28628	28641	48670;48671	48671					0.0524154317108696
PPVGHIHL	8	Unmodified	_PPVGHIHL_					0	0	0			REV__nc|ENSG00000055208|Q9NYJ8-2|TAB2	REV__nc|ENSG00000055208|Q9NYJ8-2|TAB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2517395019531	2	435.253237	868.491922	-1.5314	-0.00066653	-2.8716	-0.0012499	-4.4029	-0.0019164	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.88393	3	7399	7399;7409;7418		43.626	11.671	1	2494100	+		42864	16410	28628	28641	48672;48673;48674	48672					0.0524154317108696
PPVGHIHL	8	Unmodified	_PPVGHIHL_					0	0	0			REV__nc|ENSG00000055208|Q9NYJ8-2|TAB2	REV__nc|ENSG00000055208|Q9NYJ8-2|TAB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25140380859375	2	435.253237	868.491922	-0.32142	-0.0001399	-4.1582	-0.0018099	-4.4796	-0.0019498	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.88393	1	8991	8991		33.493	8.0428	1	2020200	+		42865	16410	28628	28641	48675	48675					0.0524154317108696
PPVGLFIYL	9	Unmodified	_PPVGLFIYL_					0	0	0			REV__ENST00000477949.1_1_1:78177422-78179066:-|nuORF	REV__ENST00000477949.1_1_1:78177422-78179066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.80364990234375	2	509.802229	1017.5899	1.253	0.0006388	1.6726	0.00085271	2.9257	0.0014915	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.72098	1	8773	8773		39.021	13.571	1	3243500	+		42866	27367	28629	28642	48676	48676					0.08181306976405267
PPVGLFIYL	9	Unmodified	_PPVGLFIYL_					0	0	0			REV__ENST00000477949.1_1_1:78177422-78179066:-|nuORF	REV__ENST00000477949.1_1_1:78177422-78179066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8037414550781	2	509.802229	1017.5899	0.22319	0.00011378	2.6981	0.0013755	2.9213	0.0014893	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.72098	1	8700	8700		39.021	6.2091	1	3453000	+		42867	27367	28629	28642	48677	48677					0.08181306976405267
PPVGLFIYL	9	Unmodified	_PPVGLFIYL_					0	0	0			REV__ENST00000477949.1_1_1:78177422-78179066:-|nuORF	REV__ENST00000477949.1_1_1:78177422-78179066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.803955078125	2	509.802229	1017.5899	0.66528	0.00033916	2.166	0.0011042	2.8313	0.0014434	509.80330176373235	84.326	2.5006	84.474	83.057	85.557	0.14794					163	57	4	0	0	0	0.78292	1	8134	8134		29.842	0.69198	1	928020	+		42868	27367	28629	28642	48678	48678					0.08181306976405267
PPVGLFIYL	9	Unmodified	_PPVGLFIYL_					0	0	0			REV__ENST00000477949.1_1_1:78177422-78179066:-|nuORF	REV__ENST00000477949.1_1_1:78177422-78179066:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.80450439453125	2	509.802229	1017.5899	0.79945	0.00040756	2.8786	0.0014675	3.6781	0.0018751	509.8035075360295	99.292	1.0934	99.448	99.074	100.17	0.15659					54	25	3	0	0	0	0.78292	1	10349	10349		29.842	1.9593	1	232530	+		42869	27367	28629	28642	48679	48679					0.08181306976405267
PPVGLFIYL	9	Unmodified	_PPVGLFIYL_					0	0	0			REV__ENST00000477949.1_1_1:78177422-78179066:-|nuORF	REV__ENST00000477949.1_1_1:78177422-78179066:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8051452636719	2	509.802229	1017.5899	-0.23209	-0.00011832	3.6675	0.0018697	3.4354	0.0017514	509.8040269548471	84.32	2.2366	84.755	83.379	85.615	0.43538					129	54	3	0	0	0	0.55559	1	9923	9923		49.211	9.958	1	819870	+		42870	27367	28629	28642	48680	48680					0.08181306976405267
PPVGLPVVSH	10	Unmodified	_PPVGLPVVSH_					0	0	0		ENSG00000169554|ENST00000627532|ZEB2;nc|ENSG00000169554|O60315-2|ZEB2	ENSG00000169554|ENST00000627532|ZEB2	ENSG00000169554|ENST00000627532|ZEB2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.29022216796875	2	501.292559	1000.57057	-0.97974	-0.00049113	-3.1223	-0.0015652	-4.1021	-0.0020563	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.86452	1	8081	8081		30.504	0	1	2111000			42871	6504	28630	28643	48681	48681					0.07030350685522535
PPVGNRLPQR	10	Unmodified	_PPVGNRLPQR_					0	0	0		ENST00000425155.6_1_5:176795054-176799073:+|nuORF	ENST00000425155.6_1_5:176795054-176799073:+|nuORF	ENST00000425155.6_1_5:176795054-176799073:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.327880859375	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.86589	1	11245	11245		29.15	0	1	6182600			42872	11528	28631	28644	48682	48682					0.08550747585650242
PPVGRFGAL	9	Unmodified	_PPVGRFGAL_					0	0	0			REV__ENST00000379888.8_1_10:6131069-6139013:+|nuORF	REV__ENST00000379888.8_1_10:6131069-6139013:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26409912109375	2	457.266345	912.518136	-1.5615	-0.00071403	-2.9129	-0.001332	-4.4744	-0.002046	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.77546	1	7960	7960		31.955	3.7006	1	4061400	+		42873	25931	28632	28645	48683	48683					0.05837812342565485
PPVHLIPAAS	10	Unmodified	_PPVHLIPAAS_					0	0	0			REV__ENSG00000166833|ENST00000349880|NAV2	REV__ENSG00000166833|ENST00000349880|NAV2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.290771484375	2	501.292559	1000.57057	-0.94239	-0.00047241	-3.1642	-0.0015862	-4.1066	-0.0020586	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.86452	1	8150	8150		30.504	0	1	6939200	+		42874	21328	28633	28646	48684	48684					0.07030350685522535
PPVHLIPAAS	10	Unmodified	_PPVHLIPAAS_					0	0	0			REV__ENSG00000166833|ENST00000349880|NAV2	REV__ENSG00000166833|ENST00000349880|NAV2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2904052734375	2	501.292559	1000.57057	-0.50311	-0.0002522	-3.7566	-0.0018832	-4.2597	-0.0021354	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.86452	1	8440	8440		30.504	0.18592	1	10459000	+		42875	21328	28633	28646	48685	48685					0.07030350685522535
PPVHPRLL	8	Unmodified	_PPVHPRLL_					0	0	0			REV__nc|ENSG00000116641|Q96N67-7|DOCK7	REV__nc|ENSG00000116641|Q96N67-7|DOCK7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7908020019531	2	464.789987	927.565421	0.1718	7.9849E-05	1.429	0.0006642	1.6008	0.00074405	464.7905115336865	34.402	1.3055	34.346	33.931	35.236	-0.055149					140	57	3	0	0	0	0.82464	1	1704	1704		21.702	1.2205	1	289420	+		42876	18205	28634	28647	48686	48686					0.09874091613551172
PPVIGGTKLH	10	Unmodified	_PPVIGGTKLH_					0	0	0			REV__ENST00000518114.1_1_2:190619886-190627438:-|nuORF	REV__ENST00000518114.1_1_2:190619886-190627438:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8060302734375	2	509.805834	1017.59712	-0.37726	-0.00019233	-3.8339	-0.0019545	-4.2111	-0.0021469	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.86589	1	8352	8352		29.15	2.3535	1	3415500	+		42877	18789	28635	28648	48687	48687					0.08902039576844345
PPVIKNMA	8	Unmodified	_PPVIKNMA_					0	0	0		ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF	ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2514343261719	2	435.249306	868.484059	1.6099	0.00070073	2.9528	0.0012852	4.5628	0.001986	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.884	3	7955	7754;7955;8265		44.531	9.3304	1	3370400			42878	849	28636	28649	48688;48689;48690	48689					0.04455647859288092
PPVIPICIS	9	Unmodified	_PPVIPICIS_					0	0	0			REV__ENSG00000125124|ENST00000245157|BBS2	REV__ENSG00000125124|ENST00000245157|BBS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7722473144531	2	469.772614	937.530675	-1.0921	-0.00051302	2.3814	0.0011187	1.2893	0.0006057	469.77366648246357	21.055	0.36584	21.1	20.938	21.303	0.045399					23	16	2	0	0	0	0.77546	1	545	545		31.955	0.42505	1	107230	+		42879	18628	28637	28650	48691	48691					0.0594108769058721
PPVIPICIS	9	Unmodified	_PPVIPICIS_					0	0	0			REV__ENSG00000125124|ENST00000245157|BBS2	REV__ENSG00000125124|ENST00000245157|BBS2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	469.772614	937.530675	-1.0921	-0.00051302	2.3814	0.0011187	1.2893	0.0006057	469.77366648246357	21.055	0.36584	21.1	20.938	21.303	0.045399	0.12102	0.0006389	NaN	31.955	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107230	+		42880	18628	28637	28650							0.0594108769058721
PPVIPICIS	9	Unmodified	_PPVIPICIS_					0	0	0			REV__ENSG00000125124|ENST00000245157|BBS2	REV__ENSG00000125124|ENST00000245157|BBS2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	469.772614	937.530675	0.052239	2.454E-05	1.5208	0.00071444	1.5731	0.00073898	469.77316706938643	20.777	0.46069	20.853	20.676	21.137	0.07585	-0.12657	-0.00016965	NaN	31.955	35	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139560	+		42881	18628	28637	28650							0.0594108769058721
PPVLLARGPT	10	Unmodified	_PPVLLARGPT_					0	0	0			REV__ENSG00000174705|ENST00000311601|SH3PXD2B	REV__ENSG00000174705|ENST00000311601|SH3PXD2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8125915527344	2	510.813659	1019.61277	-0.74779	-0.00038198	-0.18473	-9.436E-05	-0.93251	-0.00047634	510.8133905049578	88.995	0.76931	89.465	89.034	89.803	0.47068					40	18	3	0	0	0	0.86589	1	10538	10538		29.15	1.2673	1	907200	+		42882	22008	28638	28651	48692	48692					0.10374326093892705
PPVLLLCF	8	Unmodified	_PPVLLLCF_					0	0	0			REV__nc|ENSG00000182871|P39060|COL18A1	REV__nc|ENSG00000182871|P39060|COL18A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.2686462402344	2	451.264425	900.514297	0.54587	0.00024633	-1.9699	-0.00088895	-1.424	-0.00064262	451.26365307716065	77.533	1.0608	77.67	77.249	78.31	0.1366					71	42	3	0	0	0	0.84567	1	7285	7285		24.504	0.30126	1	70049	+		42883	30082	28639	28652	48693	48693					0.0600600652447838
PPVLPPLT	8	Unmodified	_PPVLPPLT_					0	0	0		ENST00000524630.5_1_11:57585076-57585268:+|nuORF	ENST00000524630.5_1_11:57585076-57585268:+|nuORF	ENST00000524630.5_1_11:57585076-57585268:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.25848388671875	2	417.260197	832.50584	-2.1518	-0.00089787	-1.6828	-0.00070218	-3.8346	-0.0016	417.25934690137603	21.231	2.6146	21.231	20.572	23.187	0					203	120	3	0	0	0	0.82464	1	599	599		21.702	4.9974	1	250530			42884	13221	28640	28653	48694	48694					0.08288775879520927
PPVLPSKMHK	10	Unmodified	_PPVLPSKMHK_					0	0	0			REV__chr13:99985109-99985286|34|17.74|0.42|5.4|+|0|ZIC2,None|1	REV__chr13:99985109-99985286|34|17.74|0.42|5.4|+|0|ZIC2,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.329833984375	2	567.328619	1132.64269	1.497	0.00084932	0.52822	0.00029968	2.0253	0.001149	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.86763	1	9864	9864		26.693	1.1189	1	15259000	+		42885	15584	28641	28654	48695	48695					0.08166941767581193
PPVLPSKMHK	10	Unmodified	_PPVLPSKMHK_					0	0	0			REV__chr13:99985109-99985286|34|17.74|0.42|5.4|+|0|ZIC2,None|1	REV__chr13:99985109-99985286|34|17.74|0.42|5.4|+|0|ZIC2,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3294677734375	2	567.328619	1132.64269	0.79571	0.00045143	1.1706	0.0006641	1.9663	0.0011155	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.86348	1	9695	9695		31.53	0	1	18145000	+		42886	15584	28641	28654	48696	48696					0.08166941767581193
PPVLQMFL	8	Unmodified	_PPVLQMFL_					0	0	0			REV__ENST00000448810.5_1_5:131726469-131729504:+|nuORF	REV__ENST00000448810.5_1_5:131726469-131729504:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7670593261719	2	472.767332	943.52011	0.62555	0.00029574	-0.79766	-0.00037711	-0.17211	-8.1367E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.92176	1	8170	8170		46.766	14.812	1	508030	+		42887	23224	28642	28655	48697	48697					0.046091050361496855
PPVPALLAPCR	11	Unmodified	_PPVPALLAPCR_					0	0	0		ENST00000274276.7_1_5:38846207-38869214:+|nuORF	ENST00000274276.7_1_5:38846207-38869214:+|nuORF	ENST00000274276.7_1_5:38846207-38869214:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3291625976562	2	567.328619	1132.64269	-1.3957	-0.00079181	3.4589	0.0019623	2.0632	0.0011705	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.68378	1	9756	9756		34.173	3.6689	1	17338000			42888	9586	28643	28656	48698	48698					0.08166941767558455
PPVPCKLF	8	Unmodified	_PPVPCKLF_					0	0	0			REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9	REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.75537109375	2	450.754224	899.493896	-1.2719	-0.00057332	1.1218	0.00050565	-0.15011	-6.7663E-05	450.7546758979468	81.682	3.9504	81.682	80.4	84.351	0					234	110	3	0	0	0	0.90024	1	7465	7465		39.021	10.767	1	177450	+		42889	19479	28644	28657	48699	48699					0.04012835864682529
PPVPLGHIQ	9	Unmodified	_PPVPLGHIQ_					0	0	0			REV__ENSG00000068323|ENST00000315869|TFE3	REV__ENSG00000068323|ENST00000315869|TFE3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2782287597656	2	479.279452	956.544351	-1.0476	-0.00050211	-2.956	-0.0014168	-4.0037	-0.0019189	479.27794521109934	87.608	3.0549	87.608	87.076	90.13	0					149	70	3	0	0	0	0.74905	1	8458	8458		37.028	5.0736	1	645930	+		42890	16556	28645	28658	48700	48700					0.0643408151404401
PPVPLPFF	8	Unmodified	_PPVPLPFF_					0	0	0		ENSG00000241241|ENST00000440582|KRTAP4-16	ENSG00000241241|ENST00000440582|KRTAP4-16	ENSG00000241241|ENST00000440582|KRTAP4-16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2633056640625	2	457.262739	912.510926	-0.039888	-1.8239E-05	3.5257	0.0016122	3.4858	0.0015939	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.91333	1	9763	9763		43.626	6.4669	1	4402400			42891	8790	28646	28659	48701	48701					0.051170797421377756
PPVPPRPTQ	9	Unmodified	_PPVPPRPTQ_					0	0	0		nc|ENSG00000128512|Q8N1I0|DOCK4;ENSG00000128512|ENST00000428084|DOCK4;nc|ENSG00000128512|Q8N1I0-4|DOCK4;ENST00000486186.1_7:111368332-111379399:-|nuORF	nc|ENSG00000128512|Q8N1I0|DOCK4	nc|ENSG00000128512|Q8N1I0|DOCK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7801513671875	2	494.782359	987.550165	-0.60063	-0.00029718	-3.4065	-0.0016855	-4.0071	-0.0019826	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.78536	1	8485	8485		29.15	1.2673	1	707910			42892	3544	28647	28660	48702	48702					0.05589180025708629
PPVPRAPLP	9	Unmodified	_PPVPRAPLP_					0	0	0			REV__ENST00000499869.6_1_4:10118306-10118447:-|nuORF	REV__ENST00000499869.6_1_4:10118306-10118447:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.287841796875	2	472.28982	942.565087	-0.38046	-0.00017969	-3.8175	-0.001803	-4.198	-0.0019827	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.76996	1	11522	11522		33.516	1.5607	1	24731000	+		42893	27801	28648	28661	48703	48703					0.09150671893701201
PPVPRPPPG	9	Unmodified	_PPVPRPPPG_					0	0	0		nc|ENSG00000283787|A8MZF0|PRR33;ENSG00000283787|ENST00000640310|PRR33	nc|ENSG00000283787|A8MZF0|PRR33	nc|ENSG00000283787|A8MZF0|PRR33	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2638854980469	2	457.266345	912.518136	-1.2409	-0.00056743	-3.1044	-0.0014196	-4.3454	-0.001987	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.76996	1	7563	7563		33.516	3.0119	1	2957200			42894	9064	28649	28662	48704	48704					0.05837812342565485
PPVPVCLC	8	Unmodified	_PPVPVCLC_					0	0	0		ENST00000543289.5_1_19:1388688-1391085:+|nuORF;ENST00000545446.5_1_19:1388688-1393403:+|nuORF	ENST00000543289.5_1_19:1388688-1391085:+|nuORF	ENST00000543289.5_1_19:1388688-1391085:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.237548828125	2	414.211335	826.408117	-0.061383	-2.5425E-05	-2.1727	-0.00089995	-2.2341	-0.00092538	414.21021894081554	75.811	0.45747	76.38	76.226	76.683	0.56836					13	10	2	0	0	0	0.4196	1	8632	8632		33.493	19.718	1	81519			42895	13550	28650	28663	48705	48705					-0.012030723124894394
PPVQLLQHT	9	Unmodified	_PPVQLLQHT_					0	0	0		nc|ENSG00000115598|Q9HB29-2|IL1RL2;ENSG00000115598|ENST00000264257|IL1RL2	nc|ENSG00000115598|Q9HB29-2|IL1RL2	nc|ENSG00000115598|Q9HB29-2|IL1RL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.79345703125	2	516.795466	1031.57638	-1.1229	-0.00058032	-2.9464	-0.0015227	-4.0693	-0.002103	516.7939356050468	88.475	2.4458	88.946	87.694	90.139	0.47068					178	59	4	0	0	0	0.74721	1	10435	10435		37.159	5.2042	1	833210			42896	2859	28651	28664	48706	48706					0.06185449197187154
PPVRPPLAP	9	Unmodified	_PPVRPPLAP_					0	0	0			REV__ENST00000453407.6_3_6:33289711-33291800:-|nuORF	REV__ENST00000453407.6_3_6:33289711-33291800:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2878112792969	2	472.28982	942.565087	-0.108	-5.1006E-05	-4.4569	-0.0021049	-4.5649	-0.0021559	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.7932	1	10350	10350		26.796	0	1	46909000	+		42897	26910	28652	28665	48707	48707					0.09150671893689832
PPVRQAPPL	9	Unmodified	_PPVRQAPPL_					0	0	0		ENSG00000254585|ENST00000650528|MAGEL2	ENSG00000254585|ENST00000650528|MAGEL2	ENSG00000254585|ENST00000650528|MAGEL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.79058837890625	2	487.792727	973.5709	-0.24073	-0.00011743	-3.9662	-0.0019347	-4.2069	-0.0020521	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.76996	1	9727	9727		33.516	3.0119	1	1981400			42898	8877	28653	28666	48708	48708					0.08305770405377189
PPVRRGAGRP	10	Unmodified	_PPVRRGAGRP_					0	0	0			REV__ENST00000548206.1_1_12:51467853-51477302:-|nuORF	REV__ENST00000548206.1_1_12:51467853-51477302:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8168334960938	2	531.817599	1061.62064	1.1723	0.00062347	-2.558	-0.0013604	-1.3857	-0.00073692	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.86589	1	9114	9114		29.15	1.2673	1	4413000	+		42899	28566	28654	28667	48709	48709					0.09229898134049108
PPVRRGAGRP	10	Unmodified	_PPVRRGAGRP_					0	0	0			REV__ENST00000548206.1_1_12:51467853-51477302:-|nuORF	REV__ENST00000548206.1_1_12:51467853-51477302:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8170166015625	2	531.817599	1061.62064	0.70533	0.00037511	-2.1628	-0.0011502	-1.4575	-0.00077513	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.86589	1	8613	8613		29.15	1.2673	1	1163300	+		42900	28566	28654	28667	48710	48710					0.09229898134049108
PPVRRGAGRP	10	Unmodified	_PPVRRGAGRP_					0	0	0			REV__ENST00000548206.1_1_12:51467853-51477302:-|nuORF	REV__ENST00000548206.1_1_12:51467853-51477302:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8170166015625	2	531.817599	1061.62064	0.7269	0.00038658	-2.1356	-0.0011358	-1.4087	-0.00074918	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.84112	1	8827	8827		37.159	10.466	1	4496300	+		42901	28566	28654	28667	48711	48711					0.09229898134049108
PPVSLLPF	8	Unmodified	_PPVSLLPF_					0	0	0			REV__ENSG00000112238|ENST00000369215|PRDM13	REV__ENSG00000112238|ENST00000369215|PRDM13	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7600402832031	2	435.260197	868.50584	-1.7969	-0.00078213	0.8829	0.00038429	-0.91402	-0.00039784	435.260443507755	87.411	2.7149	87.58	86.278	88.993	0.16923					97	63	3	0	0	0	0.4196	1	8591	8591		14.664	9.5772	1	311380	+		42902	17931	28655	28668	48712	48712					0.06632775879518249
PPVSPRLN	8	Unmodified	_PPVSPRLN_					0	0	0		ENSG00000114423|ENST00000394030|CBLB	ENSG00000114423|ENST00000394030|CBLB	ENSG00000114423|ENST00000394030|CBLB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2929992675781	2	440.255977	878.497401	-1.4994	-0.00066012	0.22801	0.00010038	-1.2714	-0.00055974	440.255892021959	60.2	0.60292	60.295	59.899	60.502	0.094643					43	19	3	0	0	0	0.4196	1	5142	5142		30.504	0	1	339380			42903	2769	28656	28669	48713	48713					0.05329221962892916
PPVSRRGT	8	Unmodified	_PPVSRRGT_					0	0	0		ENST00000455168.5_1_3:5163995-5164220:+|nuORF	ENST00000455168.5_1_3:5163995-5164220:+|nuORF	ENST00000455168.5_1_3:5163995-5164220:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2528381347656	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87064	4	7717	7233;7253;7659;7717		37.159	0	1	1788100			42904	11948	28657	28670	48714;48715;48716;48717	48717					0.04839453677391248
PPVSRRGT	8	Unmodified	_PPVSRRGT_					0	0	0		ENST00000455168.5_1_3:5163995-5164220:+|nuORF	ENST00000455168.5_1_3:5163995-5164220:+|nuORF	ENST00000455168.5_1_3:5163995-5164220:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2515563964844	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.88601	1	8209	8209		34.173	0	1	3292300			42905	11948	28657	28670	48718	48718					0.04839453677391248
PPVSRRGT	8	Unmodified	_PPVSRRGT_					0	0	0		ENST00000455168.5_1_3:5163995-5164220:+|nuORF	ENST00000455168.5_1_3:5163995-5164220:+|nuORF	ENST00000455168.5_1_3:5163995-5164220:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.251708984375	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.87922	1	7727	7727		31.955	0	1	3322700			42906	11948	28657	28670	48719	48719					0.04839453677391248
PPVSRRGT	8	Unmodified	_PPVSRRGT_					0	0	0		ENST00000455168.5_1_3:5163995-5164220:+|nuORF	ENST00000455168.5_1_3:5163995-5164220:+|nuORF	ENST00000455168.5_1_3:5163995-5164220:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.251953125	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.86288	1	7826	7826		26.796	0	1	2494100			42907	11948	28657	28670	48720	48720					0.04839453677391248
PPVSRRSA	8	Unmodified	_PPVSRRSA_					0	0	0			REV__ENST00000310837.8_1_17:39845180-39847075:+|nuORF	REV__ENST00000310837.8_1_17:39845180-39847075:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2515869140625	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.87479	1	7419	7419		30.504	0	1	2743300	+		42908	24896	28658	28671	48721	48721					0.04839453677379879
PPVSRRSA	8	Unmodified	_PPVSRRSA_					0	0	0			REV__ENST00000310837.8_1_17:39845180-39847075:+|nuORF	REV__ENST00000310837.8_1_17:39845180-39847075:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2519836425781	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87479	1	7382	7382		30.504	3.7075	1	2494100	+		42909	24896	28658	28671	48722	48722					0.04839453677379879
PPVSRRSA	8	Unmodified	_PPVSRRSA_					0	0	0			REV__ENST00000310837.8_1_17:39845180-39847075:+|nuORF	REV__ENST00000310837.8_1_17:39845180-39847075:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25238037109375	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.86288	2	8976	8976;8998		29.15	0	1	2235800	+		42910	24896	28658	28671	48723;48724	48723					0.04839453677379879
PPVTAVEI	8	Unmodified	_PPVTAVEI_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.237548828125	2	413.239461	824.46437	-1.33	-0.0005496	-1.1028	-0.00045573	-2.4328	-0.0010053	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.87276	4	7244	6982;6991;7124;7244		44.531	9.3304	1	895630			42911	7798	28659	28672	48725;48726;48727;48728	48728					0.04511595120197853
PPVTAVEI	8	Unmodified	_PPVTAVEI_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2375793457031	2	413.239461	824.46437	-0.18778	-7.7597E-05	-2.7175	-0.001123	-2.9053	-0.0012006	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.85277	5	7344	7344;7363;7371;7403;7498		42.474	7.2737	1	1747900			42912	7798	28659	28672	48729;48730;48731;48732;48733	48729					0.04511595120197853
PPVTAVEI	8	Unmodified	_PPVTAVEI_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.23797607421875	2	413.239461	824.46437	-0.12335	-5.0972E-05	-2.6877	-0.0011107	-2.811	-0.0011616	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.85277	5	7549	7539;7549;7608;7675;7709		35.201	7.3185	1	1978800			42913	7798	28659	28672	48734;48735;48736;48737;48738	48735					0.04511595120197853
PPVTAVEI	8	Unmodified	_PPVTAVEI_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.238037109375	2	413.239461	824.46437	-1.8341	-0.00075793	0.52075	0.00021519	-1.3134	-0.00054274	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.86288	9	7094	6941;7071;7094;7103;7151;7306;7319;7396;7405		52.299	15.271	1	2012200			42914	7798	28659	28672	48739;48740;48741;48742;48743;48744;48745;48746;48747	48741					0.04511595120197853
PPVTAVEI	8	Unmodified	_PPVTAVEI_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.23797607421875	2	413.239461	824.46437	0.52355	0.00021635	-1.497	-0.00061862	-0.97345	-0.00040227	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.88915	2	7115	7115;7142		40.573	5.3719	1	1692300			42915	7798	28659	28672	48748;48749	48748					0.04511595120197853
PPVTAVEI	8	Unmodified	_PPVTAVEI_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.23797607421875	2	413.239461	824.46437	-1.5467	-0.00063915	0.5911	0.00024426	-0.95558	-0.00039489	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.86288	1	7082	7082		26.796	1.3459	1	1341700			42916	7798	28659	28672	48750	48750					0.04511595120197853
PPVTLLLT	8	Unmodified	_PPVTLLLT_					0	0	0			REV__ENSG00000008869|ENST00000233099|HEATR5B	REV__ENSG00000008869|ENST00000233099|HEATR5B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	427.302734375	2	427.273304	852.532055	-1.7213	-0.00073547	4.4668	0.0019085	2.7455	0.0011731	427.27374966309446	67.73	0.24883	67.865	67.752	68	0.13522					17	9	3	0	0	0	0.4196	1	6045	6045		14.664	0	1	42366	+		42917	16144	28660	28673	48751	48751					0.09989045050997447
PPVTTAII	8	Unmodified	_PPVTTAII_					0	0	0		ENSG00000011132|ENST00000316757|APBA3;ENST00000588984.5_1_19:3751026-3754498:-|nuORF	ENSG00000011132|ENST00000316757|APBA3	ENSG00000011132|ENST00000316757|APBA3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2481689453125	2	406.249829	810.485105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.48	1	16.397	15.897	16.897	-0.083363								0	0	0	0.29199	1	142	142		29.842	0	1				42918	781	28661	28674	48752	48752					0.07228185499855044
PPVVLYRN	8	Unmodified	_PPVVLYRN_					0	0	0			REV__ENSG00000181544|ENST00000650831|FANCB	REV__ENSG00000181544|ENST00000650831|FANCB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27764892578125	2	479.279452	956.544351	-0.098244	-4.7086E-05	-4.1769	-0.0020019	-4.2751	-0.002049	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.86791	1	8644	8644		28.254	1.5614	1	6799600	+		42919	22465	28662	28675	48753	48753					0.06434081514032641
PPVVLYRN	8	Unmodified	_PPVVLYRN_					0	0	0			REV__ENSG00000181544|ENST00000650831|FANCB	REV__ENSG00000181544|ENST00000650831|FANCB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27740478515625	2	479.279452	956.544351	-1.5678	-0.00075141	-2.7191	-0.0013032	-4.2869	-0.0020546	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.89457	2	8157	8157;8484		46.766	11.566	1	6441000	+		42920	22465	28662	28675	48754;48755	48754					0.06434081514032641
PPVVLYRN	8	Unmodified	_PPVVLYRN_					0	0	0			REV__ENSG00000181544|ENST00000650831|FANCB	REV__ENSG00000181544|ENST00000650831|FANCB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2781677246094	2	479.279452	956.544351	-0.95082	-0.00045571	-3.0433	-0.0014586	-3.9941	-0.0019143	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.89457	1	10117	10117		37.028	4.2161	1	6350300	+		42921	22465	28662	28675	48756	48756					0.06434081514032641
PPWPLPLVSFI	11	Unmodified	_PPWPLPLVSFI_					0	0	0		ENST00000269389.7_1_17:80285027-80291704:-|nuORF	ENST00000269389.7_1_17:80285027-80291704:-|nuORF	ENST00000269389.7_1_17:80285027-80291704:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.36865234375	2	633.368267	1264.72198	0.88639	0.00056141	0.39651	0.00025114	1.2829	0.00081255	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.63176	2	9818	9818;9842		40.778	5.6261	1	5166300			42922	9547	28663	28676	48757;48758	48757					0.10020911993365189
PPWPLPLVSFI	11	Unmodified	_PPWPLPLVSFI_					0	0	0		ENST00000269389.7_1_17:80285027-80291704:-|nuORF	ENST00000269389.7_1_17:80285027-80291704:-|nuORF	ENST00000269389.7_1_17:80285027-80291704:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3689575195312	2	633.368267	1264.72198	1.4972	0.00094828	0.022758	1.4414E-05	1.52	0.0009627	633.3681812370636	95.449	2.3087	95.87	94.551	96.859	0.42051					197	55	4	0	0	0	0.6921	1	11442	11442		32.812	0	1	3612700			42923	9547	28663	28676	48759	48759					0.10020911993365189
PPWPLPLVSFI	11	Unmodified	_PPWPLPLVSFI_					0	0	0		ENST00000269389.7_1_17:80285027-80291704:-|nuORF	ENST00000269389.7_1_17:80285027-80291704:-|nuORF	ENST00000269389.7_1_17:80285027-80291704:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3687744140625	2	633.368267	1264.72198	2.3091	0.0014625	-0.94611	-0.00059924	1.363	0.00086326	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.68431	1	11820	11820		39.253	4.1008	1	10333000			42924	9547	28663	28676	48760	48760					0.10020911993365189
PPWRGLGG	8	Unmodified	_PPWRGLGG_					0	0	0		ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3	ENSG00000008300|ENST00000164024|CELSR3	ENSG00000008300|ENST00000164024|CELSR3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2276916503906	2	420.229762	838.444972	-1.3082	-0.00054975	-3.1153	-0.0013091	-4.4235	-0.0018589	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.88915	1	7331	7331		35.201	9.7505	1	419890			42925	741	28664	28677	48761	48761					0.019286836199512436
PPWRGLGG	8	Unmodified	_PPWRGLGG_					0	0	0		ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3	ENSG00000008300|ENST00000164024|CELSR3	ENSG00000008300|ENST00000164024|CELSR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2276611328125	2	420.229762	838.444972	-1.7925	-0.00075327	-2.6269	-0.0011039	-4.4195	-0.0018572	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.73619	1	7641	7641		65.897	11.133	1	831720			42926	741	28664	28677	48762	48762					0.019286836199512436
PPWVCFPSL	9	Unmodified	_PPWVCFPSL_					0	0	0		ENST00000535479.5_1_12:7086310-7087113:-|nuORF	ENST00000535479.5_1_12:7086310-7087113:-|nuORF	ENST00000535479.5_1_12:7086310-7087113:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3033447265625	2	523.262413	1044.51027	-0.041361	-2.1643E-05	-0.62772	-0.00032846	-0.66908	-0.0003501	523.7632919281951	88.178	0.17357	88.246	88.136	88.31	0.067711					5	3	2	0	0	0	0.20789	1	8949	8949		23.042	4.7181	1	24418			42927	13423	28665	28678	48763	48763					-0.010200829692166735
PPYANGDPH	9	Unmodified	_PPYANGDPH_					0	0	0		ENSG00000067704|ENST00000366922|IARS2	ENSG00000067704|ENST00000366922|IARS2	ENSG00000067704|ENST00000366922|IARS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2362976074219	2	484.217049	966.419545	0.39501	0.00019127	3.8675	0.0018727	4.2625	0.002064	484.21843695883933	86.825	0.287	87.271	87.102	87.389	0.44628					10	6	2	0	0	0	0.20789	1	10165	10165		47.916	12.715	1	41357			42928	1187	28666	28679	48764	48764					-0.06500835693145746
PPYANGDPH	9	Unmodified	_PPYANGDPH_					0	0	0		ENSG00000067704|ENST00000366922|IARS2	ENSG00000067704|ENST00000366922|IARS2	ENSG00000067704|ENST00000366922|IARS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23614501953125	2	484.217049	966.419545	-0.88266	-0.0004274	0.54512	0.00026396	-0.33754	-0.00016344	484.21662916416125	86.217	0.52698	86.664	86.403	86.93	0.44736					16	12	2	0	0	0	0.20789	1	10126	10126		53.351	7.3995	1	181750			42929	1187	28666	28679	48765	48765					-0.06500835693145746
PPYGVLRSL	9	Unmodified	_PPYGVLRSL_					0	0	0		ENSG00000108924|ENST00000226067|HLF	ENSG00000108924|ENST00000226067|HLF	ENSG00000108924|ENST00000226067|HLF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.290283203125	2	501.292559	1000.57057	-1.5697	-0.00078686	-2.6476	-0.0013272	-4.2173	-0.0021141	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.77244	1	8541	8541		32.812	1.2826	1	9242300			42930	2439	28667	28680	48766	48766					0.07030350685522535
PPYGVLRSL	9	Unmodified	_PPYGVLRSL_					0	0	0		ENSG00000108924|ENST00000226067|HLF	ENSG00000108924|ENST00000226067|HLF	ENSG00000108924|ENST00000226067|HLF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2909851074219	2	501.292559	1000.57057	0.16565	8.304E-05	-4.0766	-0.0020436	-3.911	-0.0019605	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.77244	1	9740	9740		32.812	3.6424	1	2717900			42931	2439	28667	28680	48767	48767					0.07030350685522535
PPYPPSRPALP	11	Unmodified	_PPYPPSRPALP_					0	0	0		ENST00000562045.1_1_16:2041371-2041629:+|nuORF	ENST00000562045.1_1_16:2041371-2041629:+|nuORF	ENST00000562045.1_1_16:2041371-2041629:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.3320922851562	2	596.329673	1190.64479	2.639	0.0015737	2.6396	0.001574	5.2785	0.0031477	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.66929	1	10356	10356		36.447	7.2767	1	1305600			42932	13845	28668	28681	48768	48768					0.05709693777043867
PPYTKKIKD	9	Unmodified	_PPYTKKIKD_					0	0	0			REV__ENSG00000104112|ENST00000220478|SCG3	REV__ENSG00000104112|ENST00000220478|SCG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3168334960938	2	545.318774	1088.623	0.15577	8.4944E-05	-3.7365	-0.0020376	-3.5808	-0.0019527	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.66686	4	9208	9154;9196;9208;9452		42.864	9.9293	1	17220000	+		42933	17436	28669	28682	48769;48770;48771;48772	48771					0.08222889028479585
PPYTKKIKD	9	Unmodified	_PPYTKKIKD_					0	0	0			REV__ENSG00000104112|ENST00000220478|SCG3	REV__ENSG00000104112|ENST00000220478|SCG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.316650390625	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.58668	1	10364	10364		47.657	10.498	1	4868200	+		42934	17436	28669	28682	48773	48773					0.08222889028479585
PQAAPNSALI	10	Unmodified	_PQAAPNSALI_					0	0	0		ENSG00000198746|ENST00000361720|GPATCH3	ENSG00000198746|ENST00000361720|GPATCH3	ENSG00000198746|ENST00000361720|GPATCH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.27142333984375	2	491.271824	980.529095	-0.13117	-6.444E-05	-0.12238	-6.0123E-05	-0.25355	-0.00012456	491.27160884615785	53.609	0.58157	54.023	53.745	54.326	0.4139					32	13	3	0	0	0	0.54701	1	5436	5436		52.937	1.6012	1	895060			42935	8320	28670	28683	48774	48774					0.03805169926170038
PQAHAPSP	8	Unmodified	_PQAHAPSP_					0	0	0			REV__ENST00000590776.1_1_17:40540295-40540427:-|nuORF	REV__ENST00000590776.1_1_17:40540295-40540427:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.7038879394531	2	402.703577	803.392602	-0.36836	-0.00014834	1.0574	0.00042581	0.68901	0.00027747	402.70395527880777	25.237	0.74186	25.196	24.803	25.545	-0.041168					28	19	2	0	0	0	0.86288	1	1034	1034		26.796	1.3459	1	52623	+		42936	24477	28671	28684	48775	48775					-0.016958995136747035
PQAITHPSPK	10	Unmodified	_PQAITHPSPK_					0	0	0			REV__ENST00000490199.2_1_9:35841173-35846157:+|nuORF	REV__ENST00000490199.2_1_9:35841173-35846157:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.298095703125	2	538.298373	1074.58219	-0.15282	-8.2265E-05	-0.074032	-3.9851E-05	-0.22686	-0.00012212	538.2981908710656	26.032	0.83897	25.775	25.465	26.304	-0.2572					45	18	3	0	0	0	0.44803	1	1394	1394		60.118	3.3972	1	449360	+		42937	27634	28672	28685	48776	48776					0.04788547708835722
PQAKARLAQ	9	Unmodified	_PQAKARLAQ_					0	0	0			REV__ENST00000338779.10_1_16:70697400-70697583:-|nuORF	REV__ENST00000338779.10_1_16:70697400-70697583:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7968444824219	2	491.793258	981.571963	0.13478	6.6286E-05	4.4765	0.0022015	4.6113	0.0022678	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.64922	1	5664	5664		44.117	3.3386	1	176030	+		42938	25225	28673	28686	48777	48777					0.08043984774258206
PQAKDQSY	8	Unmodified	_PQAKDQSY_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.7224426269531	2	468.724707	935.43486	-1.0822	-0.00050726	-1.9959	-0.00093555	-3.0782	-0.0014428	468.7236147293877	70.106	0.76979	70.177	69.93	70.7	0.071037					66	37	3	0	0	0	0.8347	1	6340	6340		23.042	2.0956	1	1251800	+		42939	22442	28674	28687	48778	48778					-0.03543968895951366
PQAKDQSY	8	Unmodified	_PQAKDQSY_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72332763671875	2	468.724707	935.43486	-0.030537	-1.4313E-05	-3.2322	-0.001515	-3.2628	-0.0015293	468.7232524752806	86.757	0.90463	87.203	86.694	87.599	0.44628					66	21	4	0	0	0	0.87479	1	10183	10183		30.504	0	1	4360600	+		42940	22442	28674	28687	48779	48779					-0.03543968895951366
PQAKDQSY	8	Unmodified	_PQAKDQSY_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7229919433594	2	468.724707	935.43486	-1.9165	-0.00089829	-1.277	-0.00059854	-3.1934	-0.0014968	468.7241207550591	90.104	1.871	90.574	90.243	92.114	0.47068					100	46	4	0	0	0	0.87479	1	10685	10685		30.504	0	1	6559600	+		42941	22442	28674	28687	48780	48780					-0.03543968895951366
PQALKFHRLR	10	Unmodified	_PQALKFHRLR_					0	0	0			REV__ENSG00000165757|ENST00000375377|JCAD	REV__ENSG00000165757|ENST00000375377|JCAD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5924987792969	3	422.591163	1264.75166	1.3012	0.00054986	2.2132	0.00093529	3.5144	0.0014852	422.59197853531197	58.619	1.7414	58.653	57.951	59.692	0.033905					114	50	3	0	0	0	0.86621	1	5400	5400		26.063	4.283	1	112420	+		42942	21214	28675	28688	48781	48781					0.12987288782073847
PQALLARKSQ	10	Unmodified	_PQALLARKSQ_					0	0	0		ENST00000308910.8_1_3:111842106-111842181:-|nuORF	ENST00000308910.8_1_3:111842106-111842181:-|nuORF	ENST00000308910.8_1_3:111842106-111842181:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.335205078125	2	556.332747	1110.65094	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.948	1	61.502	61.002	62.002	0.55386								0	0	0	0.45132	1	6504	6504		24.519	1.9395	1				42943	9894	28676	28689	48782	48782					0.10004212008561808
PQALLLRA	8	Unmodified	_PQALLLRA_					0	0	0			REV__ENST00000541337.5_1_5:139422034-139422808:-|nuORF	REV__ENST00000541337.5_1_5:139422034-139422808:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.2811279296875	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.728	1	40.734	40.234	41.234	0.0065727								0	0	0	0.30884	1	2950	2950		13.775	3.5906	1		+		42944	28482	28677	28690	48783	48783					0.10438385376642145
PQAQAAQSNVT	11	Unmodified	_PQAQAAQSNVT_					0	0	0			REV__nc|ENSG00000060237|Q9H4A3-5|WNK1	REV__nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	557.7797241210938	2	557.778002	1113.54145	0.80888	0.00045118	-0.87099	-0.00048582	-0.062109	-3.4643E-05	557.7765245366891	25.17	0.70598	25.194	24.876	25.582	0.024021					48	35	2	0	0	0	0.65746	1	887	887		37.812	2.1932	1	59362	+		42945	29696	28678	28691	48784	48784					-0.01077838401442932
PQARAAHL	8	Unmodified	_PQARAAHL_					0	0	0		ENSG00000168427|ENST00000409223|KLHL30	ENSG00000168427|ENST00000409223|KLHL30	ENSG00000168427|ENST00000409223|KLHL30	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.24700927734375	2	432.245944	862.477334	1.4323	0.0006191	0.96569	0.00041741	2.398	0.0010365	432.2464138290426	97.895	1.475	98.281	97.765	99.24	0.38548					115	35	5	0	0	0	0.89567	2	11820	11807;11820		57.453	7.4281	1	6652700			42946	6399	28679	28692	48785;48786	48786					0.04059471022924299
PQARAAHL	8	Unmodified	_PQARAAHL_					0	0	0		ENSG00000168427|ENST00000409223|KLHL30	ENSG00000168427|ENST00000409223|KLHL30	ENSG00000168427|ENST00000409223|KLHL30	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.2470703125	2	432.245944	862.477334	1.6286	0.00070397	0.89291	0.00038596	2.5215	0.0010899	432.24636827465696	97.973	1.4306	98.35	97.873	99.304	0.37679					103	34	5	0	0	0	0.90024	2	11821	11821;11844		39.021	1.993	1	6519900			42947	6399	28679	28692	48787;48788	48787					0.04059471022924299
PQARGAPSN	9	Unmodified	_PQARGAPSN_					0	0	0			REV__ENSG00000151690|ENST00000392328|MFSD6	REV__ENSG00000151690|ENST00000392328|MFSD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2325744628906	2	449.230491	896.446428	0.61452	0.00027606	-0.40863	-0.00018357	0.20588	9.249E-05	449.2302672922752	83.471	4.8977	83.402	80.905	85.803	-0.069313					227	113	3	0	0	0	0.78528	1	8546	8546		29.17	0.020503	1	260170	+		42948	20265	28680	28693	48789	48789					-0.0059372708195724044
PQARLLLLLLP	11	Unmodified	_PQARLLLLLLP_					0	0	0			REV__nc|ENSG00000105290|P51693|APLP1	REV__nc|ENSG00000105290|P51693|APLP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.917236328125	2	623.915916	1245.81728	0.92337	0.0005761	-0.11573	-7.2206E-05	0.80764	0.0005039	623.9158741950614	109.97	0.49825	110.05	109.81	110.31	0.073692					34	20	2	0	0	0	0.77937	1	11818	11818		15.642	0	1	1648100	+		42949	17525	28681	28694	48790	48790					0.2042026518442981
PQARLLLLLLP	11	Unmodified	_PQARLLLLLLP_					0	0	0			REV__nc|ENSG00000105290|P51693|APLP1	REV__nc|ENSG00000105290|P51693|APLP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	623.915916	1245.81728	-0.25928	-0.00016177	1.9338	0.0012065	1.6745	0.0010448	623.9167355872261	109.87	0.13441	109.82	109.76	109.89	-0.055084	-0.15679	0.0029315	NaN	15.642	10	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1058900	+		42950	17525	28681	28694							0.2042026518442981
PQAVLDLL	8	Unmodified	_PQAVLDLL_					0	0	0		ENSG00000126107|ENST00000372172|HECTD3;nc|ENSG00000126107|Q5T447-2|HECTD3	ENSG00000126107|ENST00000372172|HECTD3	ENSG00000126107|ENST00000372172|HECTD3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7600402832031	2	434.760561	867.506569	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.713	1	87.882	87.382	88.382	0.16923								0	0	0	0.29568	1	8629	8629		35.201	0	1				42951	3442	28682	28695	48791	48791					0.06751570528570028
PQCARLKAART	11	Unmodified	_PQCARLKAART_					0	0	0			REV__nc|ENSG00000134222|Q6PGN9-3|PSRC1	REV__nc|ENSG00000134222|Q6PGN9-3|PSRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.5649719238281	3	405.564396	1213.67136	-0.96961	-0.00039324	1.6216	0.00065768	0.65202	0.00026444	405.5649330615565	61.08	0.45033	61.089	60.713	61.164	0.0081177					29	17	2	0	0	0	0.7144	1	5309	5309		20.315	2.4819	1	354150	+		42952	29856	28683	28696	48792	48792					0.07307059396703153
PQCPDAQDE	9	Unmodified	_PQCPDAQDE_					0	0	0			REV__nc|ENSG00000148702|Q14520-2|HABP2	REV__nc|ENSG00000148702|Q14520-2|HABP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.79840087890625	2	501.695289	1001.37602	-0.33786	-0.0001695	0.49797	0.00024983	0.16012	8.0331E-05	501.6953603782906	25.951	4.0128	25.694	23.49	27.503	-0.25721					148	90	3	0	0	0	0.20789	1	1307	1307		49.442	0	1	219150	+		42953	20133	28684	28697	48793	48793					-0.12460813252596381
PQCQPQEAIPS	11	Unmodified	_PQCQPQEAIPS_					0	0	0		nc|ENSG00000160961|Q96JL9-3|ZNF333;ENSG00000160961|ENST00000292530|ZNF333	nc|ENSG00000160961|Q96JL9-3|ZNF333	nc|ENSG00000160961|Q96JL9-3|ZNF333	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.2807006835938	2	599.282063	1196.54957	0.35213	0.00021102	-0.76351	-0.00045756	-0.41138	-0.00024653	599.2814597176626	41.781	0.996	41.736	41.358	42.354	-0.045467					57	26	3	0	0	0	0.57736	1	2794	2794		46.457	7.2039	1	2305700			42954	5621	28685	28698	48794	48794					-0.04084027476301344
PQCQRLKL	8	Unmodified	_PQCQRLKL_					0	0	0		nc|ENSG00000171680|O94827-4|PLEKHG5;ENSG00000171680|ENST00000377728|PLEKHG5;nc|ENSG00000171680|O94827-3|PLEKHG5;nc|ENSG00000171680|O94827-7|PLEKHG5	nc|ENSG00000171680|O94827-4|PLEKHG5	nc|ENSG00000171680|O94827-4|PLEKHG5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7263488769531	2	493.284211	984.55387	-0.18959	-9.352E-05	-4.0904	-0.0020177	-4.28	-0.0021112	493.28222047919667	80.274	0.55081	80.801	80.569	81.12	0.52676					19	12	2	0	0	0	0.4196	1	9277	9277		38.806	0	1	246800			42955	6695	28686	28699	48795	48795					0.06097526527901209
PQDPFMPH	8	Unmodified	_PQDPFMPH_					0	0	0			REV__nc|ENSG00000134769|Q9Y4J8-9|DTNA	REV__nc|ENSG00000134769|Q9Y4J8-9|DTNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7184753417969	2	484.71837	967.422187	1.7202	0.00083382	-2.9684	-0.0014389	-1.2482	-0.00060504	484.71724999015095	100.07	1.5114	100.41	100.06	101.57	0.33295					128	39	5	0	0	0	0.91005	1	12191	12191		42.474	1.9018	1	10028000	+		42956	19166	28687	28700	48796	48796					-0.06282703559838865
PQDPFMPH	8	Unmodified	_PQDPFMPH_					0	0	0			REV__nc|ENSG00000134769|Q9Y4J8-9|DTNA	REV__nc|ENSG00000134769|Q9Y4J8-9|DTNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7184753417969	2	484.71837	967.422187	1.5654	0.00075878	-2.127	-0.001031	-0.5616	-0.00027222	484.7173495801951	99.412	0.71777	99.775	99.447	100.17	0.36292					52	17	4	0	0	0	0.91005	1	12031	12031		42.474	1.9018	1	4379500	+		42957	19166	28687	28700	48797	48797					-0.06282703559838865
PQDPFMPH	8	Unmodified	_PQDPFMPH_					0	0	0			REV__nc|ENSG00000134769|Q9Y4J8-9|DTNA	REV__nc|ENSG00000134769|Q9Y4J8-9|DTNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71881103515625	2	484.71837	967.422187	1.8339	0.00088894	-2.5144	-0.0012188	-0.68046	-0.00032983	484.717227769282	100.08	1.4855	100.42	100.11	101.59	0.3459					119	38	5	0	0	0	0.92457	1	12140	12140		47.916	1.9636	1	10268000	+		42958	19166	28687	28700	48798	48798					-0.06282703559838865
PQDSRGLTAL	10	Unmodified	_PQDSRGLTAL_					0	0	0		ENST00000491377.1_1_17:27903302-27903952:-|nuORF	ENST00000491377.1_1_17:27903302-27903952:-|nuORF	ENST00000491377.1_1_17:27903302-27903952:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.285400390625	2	529.285463	1056.55637	0.19495	0.00010318	-0.17096	-9.0484E-05	0.023995	1.27E-05	529.2853187675356	38.347	0.7284	38.689	38.379	39.107	0.34187					37	17	3	0	0	0	0.67571	1	3149	3149		45.972	0	1	653940			42959	12684	28688	28701	48799	48799					0.030356534665543222
PQENSLWPK	9	Unmodified	_PQENSLWPK_					0	0	0		nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10;ENST00000519732.5_1_17:67144970-67171813:-|nuORF;ENST00000522406.5_1_17:67144970-67178294:-|nuORF	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	nc|ENSG00000154263|Q8WWZ4-2|ABCA10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.8295288085938	2	549.782556	1097.55056	-0.4379	-0.00024075	-0.069258	-3.8077E-05	-0.50716	-0.00027883	549.7823724484339	48.146	0.56495	49.069	48.744	49.309	0.92315					23	13	2	0	0	0	0.20789	1	4654	4654		39.253	0	1	395080			42960	5269	28689	28702	48800	48800					0.005685549548843483
PQEREWGRDPS	11	Unmodified	_PQEREWGRDPS_					0	0	0			REV__ENSG00000160460|ENST00000598249|SPTBN4	REV__ENSG00000160460|ENST00000598249|SPTBN4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.8810729980469	3	452.881219	1355.62183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.273	1	17.35	16.85	17.85	0.07715								0	0	0	0.56276	1	173	173		37.6	10.553	1		+		42961	20721	28690	28703	48801	48801					-0.04175977078375581
PQESNLNRKRK	11	Unmodified	_PQESNLNRKRK_					0	0	0		ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.2696533203125	3	457.260141	1368.75859	1.0984	0.00050227	2.9098	0.0013306	4.0083	0.0018328	457.26142981074406	27.819	0.30927	27.565	27.411	27.72	-0.25465					10	6	2	0	0	0	0.17432	1	1639	1639		39.873	12.229	1	31031			42962	5124	28691	28704	48802	48802					0.08896556871945904
PQFAMLKKEVS	11	Unmodified	_PQFAMLKKEVS_					0	0	0			REV__ENSG00000143811|ENST00000343818|PYCR2	REV__ENSG00000143811|ENST00000343818|PYCR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3589477539062	2	639.349748	1276.68494	3.0904	0.0019759	3.3759	0.0021584	6.4664	0.0041343	640.3567163045125	99.066	2.3862	99.429	98.727	101.11	0.36292					195	59	5	0	0	0	0.66929	1	12100	12100		36.447	1.2947	1	1604000	+		42963	19843	28692	28705	48803	48803					0.05766872385311217
PQFLGMYRLN	10	Unmodified	_PQFLGMYRLN_					0	0	0		ENST00000422321.5_1_10:22856588-22898637:-|nuORF;nc|ENSG00000150867|P48426-2|PIP4K2A;ENSG00000150867|ENST00000376573|PIP4K2A	ENST00000422321.5_1_10:22856588-22898637:-|nuORF	ENST00000422321.5_1_10:22856588-22898637:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2726135253906	3	413.549864	1237.62776	-0.17202	-7.1138E-05	2.449	0.0010128	2.277	0.00094164	413.5507516065231	29.612	0.47547	29.582	29.386	29.862	-0.029207					17	10	2	0	0	0	0.37624	1	1859	1859		20.03	0	1	81515			42964	11479	28693	28706	48804	48804					0.018454498995879476
PQGAPLPKH	9	Unmodified	_PQGAPLPKH_					0	0	0		ENST00000336967.7_1_19:54378320-54378569:+|nuORF	ENST00000336967.7_1_19:54378320-54378569:+|nuORF	ENST00000336967.7_1_19:54378320-54378569:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7674255371094	2	472.769252	943.52395	-0.93003	-0.00043969	-3.4036	-0.0016091	-4.3336	-0.0020488	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.74721	1	8299	8299		37.159	1.5408	1	526610			42965	10179	28694	28707	48805	48805					0.04992910854218735
PQGCLKTG	8	Unmodified	_PQGCLKTG_					0	0	0		ENST00000526409.5_1_11:62342313-62344193:-|nuORF	ENST00000526409.5_1_11:62342313-62344193:-|nuORF	ENST00000526409.5_1_11:62342313-62344193:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	402.2049255371094	2	402.207638	802.400723	-1.0356	-0.00041653	-3.6857	-0.0014824	-4.7213	-0.0018989	402.2060768778475	98.029	2.4948	98.029	96.767	99.262	0					118	59	3	0	0	0	0.87064	1	9870	9870		29.15	2.3535	1	480830			42966	13259	28695	28708	48806	48806					-0.008380885885458156
PQGIKIEFTR	10	Unmodified	_PQGIKIEFTR_					0	0	0			REV__ENST00000524576.5_1_11:66203480-66233392:-|nuORF	REV__ENST00000524576.5_1_11:66203480-66233392:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	594.8370361328125	2	594.840405	1187.66626	-1.8463	-0.0010983	-2.1096	-0.0012549	-3.9559	-0.0023531	594.8391183402547	69.554	0.6607	69.59	69.382	70.042	0.035614					50	33	2	0	0	0	0.86348	1	6664	6664		31.53	7.0106	1	1808800	+		42967	22002	28696	28709	48807	48807					0.07993078805748155
PQGKAWQL	8	Unmodified	_PQGKAWQL_					0	0	0			REV__ENST00000330651.10_1_22:50702225-50702900:-|nuORF	REV__ENST00000330651.10_1_22:50702225-50702900:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.254150390625	2	464.255977	926.497401	-1.597	-0.00074142	-2.6107	-0.001212	-4.2077	-0.0019534	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.90465	1	8347	8347		40.573	0	1	1324500	+		42968	25112	28697	28710	48808	48808					0.031212219628855564
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2630920410156	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.8621	3	7962	7587;7938;7962		34.173	1.3601	1	2957200			42969	13248	28698	28711	48809;48810;48811	48811					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26373291015625	2	457.264333	912.514114	-0.13162	-6.0186E-05	0.19173	8.7669E-05	0.060104	2.7483E-05	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.87064	1	7736	7736		29.15	2.3535	1	1194000			42970	13248	28698	28711	48812	48812					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2640380859375	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.86677	6	8159	7971;8018;8159;8196;8399;8411		34.173	6.2903	1	4511100			42971	13248	28698	28711	48813;48814;48815;48816;48817;48818	48815					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2638854980469	2	457.264333	912.514114	0.21557	9.8573E-05	-0.19878	-9.0895E-05	0.016791	7.678E-06	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.8621	2	7958	7958;8133		35.618	4.0885	1	1366100			42972	13248	28698	28711	48819;48820	48819					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2640686035156	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.8621	3	8248	8248;8318;8634		42.396	6.4687	1	4885100			42973	13248	28698	28711	48821;48822;48823	48821					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2635498046875	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.90089	1	8020	8020		39.253	2.0937	1	1458600			42974	13248	28698	28711	48824	48824					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2633972167969	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.88601	2	8067	8067;8114		35.618	10.044	1	4814400			42975	13248	28698	28711	48825;48826	48825					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2632141113281	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.86677	2	7431	7431;7460		34.173	8.7224	1	1329900			42976	13248	28698	28711	48827;48828	48827					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.263427734375	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.8621	5	8124	7757;8040;8100;8124;8244		39.253	13.803	1	4732500			42977	13248	28698	28711	48829;48830;48831;48832;48833	48832					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2635498046875	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.87792	2	7694	7671;7694		39.253	5.0803	1	1262800			42978	13248	28698	28711	48834;48835	48835					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.26397705078125	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.8621	5	7894	7846;7894;8079;8142;8249		38.806	6.8513	1	4597500			42979	13248	28698	28711	48836;48837;48838;48839;48840	48837					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2629089355469	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.87064	2	7437	7437;7484		34.173	3.6994	1	1032000			42980	13248	28698	28711	48841;48842	48841					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2635498046875	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.88601	2	7658	7658;7914		35.618	3.6689	1	4061400			42981	13248	28698	28711	48843;48844	48843					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2628479003906	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.8621	2	9686	9397;9686		34.173	3.6689	1	3505500			42982	13248	28698	28711	48845;48846	48846					0.054357228488470355
PQGKTLRN	8	Unmodified	_PQGKTLRN_					0	0	0		ENST00000530702.1_2_11:10827460-10828835:-|nuORF;ENST00000525995.1_1_11:10827460-10829842:-|nuORF;ENST00000526148.5_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	ENST00000530702.1_2_11:10827460-10828835:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2638244628906	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.87064	2	9406	9406;9551		34.173	3.6689	1	4402400			42983	13248	28698	28711	48847;48848	48847					0.054357228488470355
PQGLWVKRRR	10	Unmodified	_PQGLWVKRRR_					0	0	0			REV__ENST00000507416.1_1_5:60457038-60458278:-|nuORF	REV__ENST00000507416.1_1_5:60457038-60458278:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.59759521484375	3	432.598429	1294.77346	-1.5737	-0.00068079	0.9256	0.00040041	-0.64812	-0.00028038	432.59875141375613	106.97	1.3878	107.11	106.64	108.03	0.13866					68	34	2	0	0	0	0.85251	1	11414	11414		14.086	0	1	21235000	+		42984	27906	28699	28712	48849	48849					0.13786093530620747
PQGNQARL	8	Unmodified	_PQGNQARL_					0	0	0		ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.24072265625	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.89962	1	8281	8281		38.806	0	1	1244000			42985	1166	28700	28713	48850	48850					0.021228632976999506
PQGNTIKR	8	Unmodified	_PQGNTIKR_					0	0	0		ENST00000307714.12_1_1:32479575-32503673:+|nuORF;nc|ENSG00000121774|Q07666-2|KHDRBS1;ENSG00000121774|ENST00000327300|KHDRBS1	ENST00000307714.12_1_1:32479575-32503673:+|nuORF	ENST00000307714.12_1_1:32479575-32503673:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26361083984375	2	457.264333	912.514114	0.21557	9.8573E-05	-0.19878	-9.0895E-05	0.016791	7.678E-06	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.8621	1	7893	7893		26.693	1.2427	1	1366100			42986	3197	28701	28714	48851	48851					0.054357228488470355
PQGPRLLRLPA	11	Unmodified	_PQGPRLLRLPA_					0	0	0		ENST00000502854.5_1_5:176830573-176831380:-|nuORF;ENST00000510358.5_1_5:176830573-176831188:-|nuORF	ENST00000502854.5_1_5:176830573-176831380:-|nuORF	ENST00000502854.5_1_5:176830573-176831380:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.5875549316406	3	406.587418	1216.74043	0.5758	0.00023411	0.0318	1.2929E-05	0.6076	0.00024704	406.5873508642622	24.247	1.5285	24.302	23.869	25.398	0.055485					100	43	4	0	0	0	0.71803	1	851	851		28.577	6.0151	1	404210			42987	12866	28702	28715	48852	48852					0.14072466687935048
PQGQKLIASLI	11	Unmodified	_PQGQKLIASLI_					0	0	0		nc|ENSG00000103534|Q6UXY8-2|TMC5;ENSG00000103534|ENST00000542583|TMC5	nc|ENSG00000103534|Q6UXY8-2|TMC5	nc|ENSG00000103534|Q6UXY8-2|TMC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.3565063476562	2	584.358431	1166.70231	-0.79353	-0.00046371	-3.4252	-0.0020015	-4.2187	-0.0024653	584.356586051485	92.738	2.8775	92.808	91.472	94.349	0.06987					192	67	3	0	0	0	0.78658	1	9559	9559		14.137	0	1	594900			42988	2089	28703	28716	48853	48853					0.1256253598260173
PQGQQLRT	8	Unmodified	_PQGQQLRT_					0	0	0			REV__ENST00000427076.5_1_7:44012246-44027706:-|nuORF	REV__ENST00000427076.5_1_7:44012246-44027706:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2538757324219	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.89962	1	9767	9767		38.806	0	1	1215000	+		42989	26552	28704	28717	48854	48854					0.027191324691784757
PQGRIQAKKWS	11	Unmodified	_PQGRIQAKKWS_					0	0	0		ENSG00000108771|ENST00000251642|DHX58;ENST00000592024.1_1_17:40253781-40254356:-|nuORF	ENSG00000108771|ENST00000251642|DHX58;ENST00000592024.1_1_17:40253781-40254356:-|nuORF	ENSG00000108771|ENST00000251642|DHX58	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.2552795410156	3	433.582444	1297.7255	1.8321	0.00079438	-0.17446	-7.5641E-05	1.6577	0.00071874	433.58136362163344	107.09	0.42238	107.19	106.99	107.41	0.10396					16	11	2	0	0	0	0.17375	1	13057	13057		30.569	5.4429	1	129210			42990	2428;14284	28705	28718	48855	48855					0.0885497481992843
PQGRNIPQKAI	11	Unmodified	_PQGRNIPQKAI_					0	0	0			REV__nc|ENSG00000134982|P25054-2|APC	REV__nc|ENSG00000134982|P25054-2|APC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3546752929688	2	611.356754	1220.69895	1.8406	0.0011253	-2.148	-0.0013132	-0.3074	-0.00018793	611.3554755611618	95.715	4.0888	96.135	95.146	99.235	0.42051					346	99	4	0	0	0	0.66929	1	11470	11470		36.447	6.129	1	11372000	+		42991	19180	28706	28719	48856	48856					0.09743285928584555
PQGRQVDADTK	11	Unmodified	_PQGRQVDADTK_					0	0	0		nc|ENSG00000139613|Q8TAQ2-2|SMARCC2;nc|ENSG00000139613|Q8TAQ2-3|SMARCC2;ENSG00000139613|ENST00000550164|SMARCC2	nc|ENSG00000139613|Q8TAQ2-2|SMARCC2	nc|ENSG00000139613|Q8TAQ2-2|SMARCC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	607.8119506835938	2	607.809833	1213.60511	-0.97079	-0.00059005	4.1804	0.0025409	3.2096	0.0019508	607.8122382575644	46.874	0.60622	46.874	46.578	47.184	0					29	15	3	0	0	0	0.69878	1	3551	3551		17.167	0	1	206630			42992	4381	28707	28720	48857	48857					0.006855220356328573
PQGSHAASA	9	Unmodified	_PQGSHAASA_					0	0	0			REV__ENST00000514146.1_1_5:180688244-180690631:+|nuORF	REV__ENST00000514146.1_1_5:180688244-180690631:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1939697265625	2	413.196116	824.37768	-1.8302	-0.00075625	-4.0037	-0.0016543	-5.834	-0.0024106	413.19437338858427	78.719	2.8895	78.846	78.411	81.3	0.12695					158	87	2	0	0	0	0.77696	1	7466	7466		31.53	0	1	956620	+		42993	27907	28708	28721	48858	48858					-0.04153391381680649
PQGSVCKSPQ	10	Unmodified	_PQGSVCKSPQ_					0	0	0		ENSG00000114933|ENST00000403263|INO80D	ENSG00000114933|ENST00000403263|INO80D	ENSG00000114933|ENST00000403263|INO80D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8031005859375	2	515.752941	1029.49133	0.55847	0.00028803	-3.6704	-0.001893	-3.112	-0.001605	515.7511759505853	22.739	0.51994	22.128	21.91	22.43	-0.6107					15	12	2	0	0	0	0.37624	1	992	992		80.455	0	1	74650			42994	2799	28709	28722	48859	48859					-0.02223664330927022
PQGSVVARGG	10	Unmodified	_PQGSVVARGG_					0	0	0		nc|ENSG00000105609|O75023-2|LILRB5;nc|ENSG00000105609|O75023|LILRB5;ENSG00000105609|ENST00000449561|LILRB5	nc|ENSG00000105609|O75023-2|LILRB5	nc|ENSG00000105609|O75023-2|LILRB5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2538146972656	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.80179	1	7865	7865		39.253	0	1	946850			42995	2228	28710	28723	48860	48860					0.027191324691898444
PQGSVVARGG	10	Unmodified	_PQGSVVARGG_					0	0	0		nc|ENSG00000105609|O75023-2|LILRB5;nc|ENSG00000105609|O75023|LILRB5;ENSG00000105609|ENST00000449561|LILRB5	nc|ENSG00000105609|O75023-2|LILRB5	nc|ENSG00000105609|O75023-2|LILRB5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2539978027344	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.67571	1	9780	9780		45.972	0	1	1215000			42996	2228	28710	28723	48861	48861					0.027191324691898444
PQGTIIIN	8	Unmodified	_PQGTIIIN_					0	0	0		ENST00000498989.2_1_14:104149443-104149605:-|nuORF	ENST00000498989.2_1_14:104149443-104149605:-|nuORF	ENST00000498989.2_1_14:104149443-104149605:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.2615051269531	2	428.25036	854.486168	0.64099	0.0002745	-2.5503	-0.0010921	-1.9093	-0.00081764	428.2488833073657	90.465	0.20839	90.619	90.471	90.679	0.15388					6	4	2	0	0	0	0.4196	1	9068	9068		19.997	0	1	74934			42997	12833	28711	28724	48862	48862					0.0531039986876749
PQGVFIKGLS	10	Unmodified	_PQGVFIKGLS_					0	0	0		ENST00000487440.5_1_3:47281337-47324087:-|nuORF;nc|ENSG00000088727|Q9HAQ2-2|KIF9;ENSG00000088727|ENST00000684063|KIF9;ENST00000484629.1_1_3:47307469-47316817:-|nuORF	ENST00000487440.5_1_3:47281337-47324087:-|nuORF	ENST00000487440.5_1_3:47281337-47324087:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3036499023438	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.86272	1	8631	8631		24.519	0.31644	1	12189000			42998	1592	28712	28725	48863	48863					0.0762661985700106
PQGVLEII	8	Unmodified	_PQGVLEII_					0	0	0			REV__ENSG00000102359|ENST00000373004|SRPX2	REV__ENSG00000102359|ENST00000373004|SRPX2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7597351074219	2	434.760561	867.506569	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.607	1	87.808	87.308	88.308	0.20114								0	0	0	0.29452	1	8659	8659		33.516	1.5607	1		+		42999	17336	28713	28726	48864	48864					0.06751570528570028
PQGVLNYG	8	Unmodified	_PQGVLNYG_					0	0	0			REV__nc|ENSG00000144893|Q86YW9-4|MED12L	REV__nc|ENSG00000144893|Q86YW9-4|MED12L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.21868896484375	2	424.21906	846.423567	2.6374	0.0011188	-3.9582	-0.0016792	-1.3209	-0.00056033	424.21733183456104	101.6	1.8618	101.55	100.84	102.7	-0.049828					92	44	4	0	0	0	0.87479	1	11043	11043		30.504	1.3541	1	2292700	+		43000	15801	28714	28727	48865	48865					-0.005787461994259502
PQGVNRVN	8	Unmodified	_PQGVNRVN_					0	0	0			REV__ENSG00000128000|ENST00000434248|ZNF780B	REV__ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2409362792969	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.91472	1	7918	7918		44.117	5.3107	1	1068200	+		43001	18758	28715	28728	48866	48866					0.021228632976999506
PQGVNRVN	8	Unmodified	_PQGVNRVN_					0	0	0			REV__ENSG00000128000|ENST00000434248|ZNF780B	REV__ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2408752441406	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.87922	1	7711	7711		31.955	1.4512	1	1219900	+		43002	18758	28715	28728	48867	48867					0.021228632976999506
PQGVNRVN	8	Unmodified	_PQGVNRVN_					0	0	0			REV__ENSG00000128000|ENST00000434248|ZNF780B	REV__ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2411804199219	2	442.240858	882.467164	-0.73522	-0.00032514	0.71434	0.00031591	-0.020876	-9.2322E-06	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.91005	1	9515	9515		42.474	1.9018	1	866900	+		43003	18758	28715	28728	48868	48868					0.021228632976999506
PQGVNRVN	8	Unmodified	_PQGVNRVN_					0	0	0			REV__ENSG00000128000|ENST00000434248|ZNF780B	REV__ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.24072265625	2	442.240858	882.467164	0.21245	9.3954E-05	-0.1421	-6.2841E-05	0.070351	3.1112E-05	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.92457	1	9389	9389		47.916	9.1095	1	1030200	+		43004	18758	28715	28728	48869	48869					0.021228632976999506
PQGVTVLPG	9	Unmodified	_PQGVTVLPG_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF;ENST00000584931.1_1_17:65936727-65940601:+|nuORF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7801513671875	2	434.25036	866.486168	-1.9257	-0.00083624	3.8828	0.0016861	1.9571	0.00084988	434.2542712308093	37.064	0.44032	37.064	36.778	37.218	0					12	9	2	0	0	0	0.20789	1	2168	2168		18.324	12.012	1	16492			43005	6691	28716	28729	48870	48870					0.047583998687514395
PQHLLLPLAPL	11	Unmodified	_PQHLLLPLAPL_					0	0	0			REV__ENST00000264079.10_1_19:7595197-7598755:+|nuORF	REV__ENST00000264079.10_1_19:7595197-7598755:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.58770751953125	3	404.588536	1210.74378	1.2344	0.00049943	-0.65796	-0.0002662	0.57646	0.00023323	404.5881712722995	41.372	1.4334	41.378	40.604	42.037	0.0065727					70	37	2	0	0	0	0.76251	1	2992	2992		19.263	0.73163	1	244970	+		43006	24464	28717	28730	48871	48871					0.14683716741956232
PQHLLRGRPVH	11	Unmodified	_PQHLLRGRPVH_					0	0	0			REV__ENST00000371694.7_1_9:139571467-139571918:-|nuORF	REV__ENST00000371694.7_1_9:139571467-139571918:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.25689697265625	3	437.258184	1308.75272	0.7066	0.00030897	-2.5687	-0.0011232	-1.8621	-0.00081421	437.25702551453304	97.287	2.1363	97.451	96.19	98.327	0.16316					129	49	3	0	0	0	0.72374	1	10126	10126		27.644	4.266	1	293250	+		43007	25694	28718	28731	48872	48872					0.11069503150952187
PQIEKEIVEKA	11	Unmodified	_PQIEKEIVEKA_					0	0	0		ENSG00000136929|ENST00000616898|HEMGN	ENSG00000136929|ENST00000616898|HEMGN	ENSG00000136929|ENST00000616898|HEMGN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	644.8632202148438	2	642.36391	1282.71327	-1.15	-0.0007387	-2.8746	-0.0018465	-4.0246	-0.0025852	642.3636846200275	112.1	1.2616	112.08	111.56	112.82	-0.019882					126	40	6	0	0	0	0.72739	1	11947	11947		27.047	1.4733	1	46098000			43008	4157	28719	28732	48873	48873					0.08321893566221661
PQIGIGFLQID	11	Unmodified	_PQIGIGFLQID_					0	0	0			REV__nc|ENSG00000137177|Q9H1H9-3|KIF13A	REV__nc|ENSG00000137177|Q9H1H9-3|KIF13A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	600.333984375	2	600.834788	1199.65502	-0.30034	-0.00018045	1.1419	0.00068609	0.84156	0.00050564	600.8358991177988	94.45	1.5802	94.497	94.21	95.791	0.046173					46	37	2	0	0	0	0.17275	1	9936	9936		27.047	4.0048	1	185970	+		43009	19366	28720	28733	48874	48874					0.06318256711620052
PQIIVVKVT	9	Unmodified	_PQIIVVKVT_					0	0	0			REV__ENSG00000116991|ENST00000674635|SIPA1L2	REV__ENSG00000116991|ENST00000674635|SIPA1L2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.8268127441406	2	498.826235	995.637917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.126	1	16.126	15.626	16.626	0								0	0	0	0.34348	1	97	97		16.473	1.6083	1		+		43010	18239	28721	28734	48875	48875					0.13992380896468148
PQIMKLHK	8	Unmodified	_PQIMKLHK_					0	0	0		ENSG00000165164|ENST00000378653|CFAP47	ENSG00000165164|ENST00000378653|CFAP47	ENSG00000165164|ENST00000378653|CFAP47	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.79547119140625	2	497.796955	993.579357	-1.2593	-0.00062688	-0.71711	-0.00035698	-1.9764	-0.00098385	497.79616758279207	48.708	1.9058	48.709	47.99	49.896	0.00017166					121	43	4	0	0	0	0.84341	1	4096	4096		24.203	0	1	500820			43011	6053	28722	28735	48876	48876					0.08231001050342002
PQIMKLHK	8	Unmodified	_PQIMKLHK_					0	0	0		ENSG00000165164|ENST00000378653|CFAP47	ENSG00000165164|ENST00000378653|CFAP47	ENSG00000165164|ENST00000378653|CFAP47	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.79486083984375	2	497.796955	993.579357	-1.3956	-0.00069473	-0.78661	-0.00039157	-2.1822	-0.0010863	497.7963785016087	47.217	0.74612	47.689	47.3	48.047	0.4714					39	17	3	0	0	0	0.84341	1	4485	4485		24.203	0	1	671490			43012	6053	28722	28735	48877	48877					0.08231001050342002
PQKLLILDARS	11	Unmodified	_PQKLLILDARS_					0	0	0		nc|ENSG00000100330|Q13615-3|MTMR3;nc|ENSG00000100330|Q13615-2|MTMR3;ENSG00000100330|ENST00000401950|MTMR3;nc|ENSG00000108389|Q9NYA4|MTMR4;ENSG00000108389|ENST00000682306|MTMR4	nc|ENSG00000100330|Q13615-3|MTMR3	nc|ENSG00000100330|Q13615-3|MTMR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3843994140625	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.65746	3	12586	12586;12835;12941		37.812	2.5074	1	19815000			43013	1825	28723	28736	48878;48879;48880	48878					0.1340560990265658
PQKLLILDARS	11	Unmodified	_PQKLLILDARS_					0	0	0		nc|ENSG00000100330|Q13615-3|MTMR3;nc|ENSG00000100330|Q13615-2|MTMR3;ENSG00000100330|ENST00000401950|MTMR3;nc|ENSG00000108389|Q9NYA4|MTMR4;ENSG00000108389|ENST00000682306|MTMR4	nc|ENSG00000100330|Q13615-3|MTMR3	nc|ENSG00000100330|Q13615-3|MTMR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3832397460938	2	627.382437	1252.75032	-1.2002	-0.000753	1.3364	0.00083845	0.1362	8.5448E-05	627.3830182520044	111.13	0.69723	111.12	110.53	111.23	-0.0074387					64	27	3	0	0	0	0.67778	1	11837	11837		35.152	0	1	327620			43014	1825	28723	28736	48881	48881					0.1340560990265658
PQKLSPHSKR	10	Unmodified	_PQKLSPHSKR_					0	0	0		nc|ENSG00000139625|Q12852|MAP3K12;ENSG00000139625|ENST00000547488|MAP3K12;ENST00000552365.1_1_12:53874968-53878035:-|nuORF;ENST00000547020.1_1_12:53877089-53877236:-|nuORF	nc|ENSG00000139625|Q12852|MAP3K12	nc|ENSG00000139625|Q12852|MAP3K12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3446655273438	2	589.343646	1176.67274	3.7001	0.0021806	-4.3346	-0.0025545	-0.63444	-0.0003739	589.3408630817031	104.64	1.3141	104.87	104.2	105.52	0.2268					67	31	4	0	0	0	0.85834	1	12813	12813		22.58	0.61977	1	499450			43015	4383	28724	28737	48882	48882					0.09147016757128767
PQKRGRGRPR	10	Unmodified	_PQKRGRGRPR_					0	0	0		ENST00000545998.1_1_12:66219050-66221909:+|nuORF;nc|ENSG00000149948|P52926-3|HMGA2;chr12:65838569-65867489|42|11.79|0.07|7.41|+|ENST00000537429|HMGA2,HMGA2;nc|ENSG00000149948|P52926-6|HMGA2;chr12:65838569-65842591|44|10.2|0.05|7.71|+|ENST00000393578|HMGA2,HMGA2;nc|ENSG00000149948|P52926-4|HMGA2;nc|ENSG00000149948|P52926-5|HMGA2;nc|ENSG00000149948|P52926-2|HMGA2;chr12:65838569-65915059|56|42.3|0.05|9.67|+|ENST00000354636|HMGA2,HMGA2;ENSG00000149948|ENST00000403681|HMGA2;chr12:65951415-65952356|54|35.94|0.08|8.9|+|ENST00000393577|HMGA2,HMGA2	ENST00000545998.1_1_12:66219050-66221909:+|nuORF	ENST00000545998.1_1_12:66219050-66221909:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3677368164062	2	604.365779	1206.717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.32	1	116.3	115.8	116.8	-0.02433								0	0	0	0.45132	1	12879	12879		20.947	0.95016	1				43016	140	28725	28738	48883	48883					0.12191465693990722
PQKSRKKLLKA	11	Unmodified	_PQKSRKKLLKA_					0	0	0			REV__ENSG00000164935|ENST00000297581|DCSTAMP	REV__ENSG00000164935|ENST00000297581|DCSTAMP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.2552795410156	3	432.95399	1295.84014	1.8526	0.0008021	3.8116	0.0016503	5.6642	0.0024524	433.2899220363696	107.08	0.18353	107.19	107.13	107.31	0.10396					7	4	2	0	0	0	0.17729	1	13057	13057		23.378	9.2919	1	523720	+		43017	21132	28726	28739	48884	48884					0.2040528430188715
PQKSSGFGF	9	Unmodified	_PQKSSGFGF_					0	0	0			REV__nc|ENSG00000080802|O95628-5|CNOT4	REV__nc|ENSG00000080802|O95628-5|CNOT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.7367858886719	2	477.737617	953.460681	0.98178	0.00046903	0.76504	0.00036549	1.7468	0.00083452	477.73797352141827	68.426	0.73729	68.811	68.445	69.182	0.38482					29	17	2	0	0	0	0.76255	1	7542	7542		35.618	1.4457	1	183450	+		43018	16810	28727	28740	48885	48885					-0.01791074653647229
PQKTKPKLAKV	11	Unmodified	_PQKTKPKLAKV_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.333984375	2	619.403173	1236.79179	0.81638	0.00050567	1.8773	0.0011628	2.6937	0.0016685	619.4052456907233	58.07	0.1246	58.623	58.555	58.679	0.55323					6	2	3	0	0	0	0.17839	1	6086	6086		7.8045	0	1	279260			43019	5333	28728	28741	48886	48886					0.18286790661977648
PQLFFPPLLV	10	Unmodified	_PQLFFPPLLV_					0	0	0			REV__nc|ENSG00000135503|P36896-3|ACVR1B	REV__nc|ENSG00000135503|P36896-3|ACVR1B	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	585.84619140625	2	585.84971	1169.68487	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.202	1	15.251	14.751	15.751	0.04908								0	0	0	0.45132	1	20	20		21.96	0.27414	1		+		43020	29864	28729	28742	48887	48887					0.10681240447593154
PQLKRHIKQ	9	Unmodified	_PQLKRHIKQ_					0	0	0		ENSG00000129292|ENST00000395386|PHF20L1;ENST00000477051.1_1_8:133854703-133858165:+|nuORF	ENSG00000129292|ENST00000395386|PHF20L1	ENSG00000129292|ENST00000395386|PHF20L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3575439453125	2	574.356557	1146.69856	0.5994	0.00034427	-1.7354	-0.00099676	-1.136	-0.00065249	574.3554932610225	99.489	2.9336	99.712	98.122	101.06	0.22262					130	68	2	0	0	0	0.7932	1	10386	10386		23.042	1.0826	1	294880			43021	3581	28730	28743	48888	48888					0.13107910999406158
PQLKSERSA	9	Unmodified	_PQLKSERSA_					0	0	0			REV__ENSG00000171700|ENST00000395042|RGS19	REV__ENSG00000171700|ENST00000395042|RGS19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2799072265625	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.76255	1	8721	8721		35.618	2.8059	1	1261800	+		43022	21759	28731	28744	48889	48889					0.03911670812135526
PQLKSERSA	9	Unmodified	_PQLKSERSA_					0	0	0			REV__ENSG00000171700|ENST00000395042|RGS19	REV__ENSG00000171700|ENST00000395042|RGS19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2801818847656	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.75725	1	8793	8793		36.447	3.6343	1	1954800	+		43023	21759	28731	28744	48890	48890					0.03911670812135526
PQLKSLGH	8	Unmodified	_PQLKSLGH_					0	0	0			REV__ENST00000276416.10_1_8:22478638-22478791:-|nuORF	REV__ENST00000276416.10_1_8:22478638-22478791:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2560729980469	2	440.255977	878.497401	-0.31439	-0.00013841	-1.3157	-0.00057923	-1.63	-0.00071764	440.2551389048843	75.663	0.81265	75.617	75.293	76.105	-0.045982					26	20	2	0	0	0	0.92973	1	7472	7472		50.025	11.003	1	71711	+		43024	24578	28732	28745	48891	48891					0.05329221962892916
PQLKSLGH	8	Unmodified	_PQLKSLGH_					0	0	0			REV__ENST00000276416.10_1_8:22478638-22478791:-|nuORF	REV__ENST00000276416.10_1_8:22478638-22478791:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2554016113281	2	440.255977	878.497401	-1.2748	-0.00056124	0.7584	0.00033389	-0.51639	-0.00022734	440.2563782510852	72.993	0.8905	73.076	72.548	73.438	0.083145					44	30	2	0	0	0	0.884	1	6693	6693		33.516	6.7195	1	106400	+		43025	24578	28732	28745	48892	48892					0.05329221962892916
PQLLRPRQIS	10	Unmodified	_PQLLRPRQIS_					0	0	0			REV__ENST00000432607.1_1_19:41314716-41315658:-|nuORF	REV__ENST00000432607.1_1_19:41314716-41315658:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.2469787597656	3	403.247173	1206.71969	3.4575	0.0013942	-3.5865	-0.0014462	-0.12898	-5.2013E-05	403.245812263779	104.32	2.7467	104.55	103.67	106.42	0.2268					126	71	3	0	0	0	0.86272	1	12747	12747		17.833	0	1	736130	+		43026	26634	28733	28746	48893	48893					0.12459876308275852
PQLLVKVC	8	Unmodified	_PQLLVKVC_					0	0	0			REV__nc|ENSG00000198483|Q8N283-2|ANKRD35	REV__nc|ENSG00000198483|Q8N283-2|ANKRD35	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2742004394531	2	450.272781	898.531009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.58	1	112.55	112.05	113.05	-0.025414								0	0	0	0.29498	1	12443	12443		26.796	3.7594	1		+		43027	30149	28734	28747	48894	48894					0.07768507410446546
PQLQFLLSYY	10	Unmodified	_PQLQFLLSYY_					0	0	0			REV__ENST00000519278.5_1_8:134267532-134267673:-|nuORF	REV__ENST00000519278.5_1_8:134267532-134267673:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.56085205078125	3	424.560535	1270.65977	1.4537	0.00061718	-0.98797	-0.00041945	0.46572	0.00019773	424.5601606035987	27.607	1.8639	27.352	26.945	28.809	-0.25465					132	44	5	0	0	0	0.78666	1	1624	1624		40.058	4.4399	1	5946800	+		43028	28077	28735	28748	48895	48895					0.03527140854384925
PQLQGASVAGP	11	Unmodified	_PQLQGASVAGP_					0	0	0			REV__ENST00000557945.5_1_15:44580961-44581297:+|nuORF	REV__ENST00000557945.5_1_15:44580961-44581297:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.7748413085938	2	512.774731	1023.53491	-0.41052	-0.0002105	-0.58572	-0.00030034	-0.99624	-0.00051085	512.7745322883873	45.216	0.61684	45.228	44.942	45.559	0.012058					32	14	3	0	0	0	0.66929	1	3252	3252		36.447	2.2742	1	362590	+		43029	28724	28736	28749	48896	48896					0.02408268437852712
PQLRLVKALLL	11	Unmodified	_PQLRLVKALLL_					0	0	0		nc|ENSG00000263715|P34998-3|CRHR1;nc|ENSG00000263715|P34998-4|CRHR1;ENSG00000120088|ENST00000314537|CRHR1;nc|ENSG00000263715|P34998-1|CRHR1	nc|ENSG00000263715|P34998-3|CRHR1	nc|ENSG00000263715|P34998-3|CRHR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.9322509765625	2	632.42919	1262.84383	-0.021077	-1.333E-05	1.2003	0.0007591	1.1792	0.00074577	632.4296452184271	108.26	0.70177	108.26	107.96	108.66	0					68	33	3	0	0	0	0.78309	1	11287	11287		14.865	0	1	3975500			43030	3114	28737	28750	48897	48897					0.2229195407574025
PQLRLVKALLL	11	Unmodified	_PQLRLVKALLL_					0	0	0		nc|ENSG00000263715|P34998-3|CRHR1;nc|ENSG00000263715|P34998-4|CRHR1;ENSG00000120088|ENST00000314537|CRHR1;nc|ENSG00000263715|P34998-1|CRHR1	nc|ENSG00000263715|P34998-3|CRHR1	nc|ENSG00000263715|P34998-3|CRHR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.9313354492188	2	632.42919	1262.84383	1.461	0.00092401	-0.48958	-0.00030962	0.97147	0.00061438	632.4287200366232	108.38	0.64588	108.51	108.19	108.83	0.13026					29	17	2	0	0	0	0.78986	1	11666	11666		13.454	3.1888	1	3788100			43031	3114	28737	28750	48898	48898					0.2229195407574025
PQLRRKRR	8	Unmodified	_PQLRRKRR_					0	0	0			REV__ENST00000391975.5_1_2:242194961-242195633:-|nuORF	REV__ENST00000391975.5_1_2:242194961-242195633:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3569946289062	2	555.359965	1108.70538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.803	1	23.897	23.397	24.397	0.094501								0	0	0	0.29568	1	789	789		35.201	2.3883	1		+		43032	26010	28738	28751	48899	48899					0.15537268670641424
PQLRVSNN	8	Unmodified	_PQLRVSNN_					0	0	0			REV__ENSG00000090432|ENST00000264198|MUL1	REV__ENSG00000090432|ENST00000264198|MUL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2535400390625	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.89494	1	8537	8537		37.159	8.0096	1	1449300	+		43033	16986	28739	28752	48900	48900					0.027191324691784757
PQLRVSNN	8	Unmodified	_PQLRVSNN_					0	0	0			REV__ENSG00000090432|ENST00000264198|MUL1	REV__ENSG00000090432|ENST00000264198|MUL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2536315917969	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.89043	1	8780	8780		35.618	3.6634	1	1578600	+		43034	16986	28739	28752	48901	48901					0.027191324691784757
PQLRVSNN	8	Unmodified	_PQLRVSNN_					0	0	0			REV__ENSG00000090432|ENST00000264198|MUL1	REV__ENSG00000090432|ENST00000264198|MUL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25372314453125	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.89494	1	8195	8195		37.159	4.3467	1	1603800	+		43035	16986	28739	28752	48902	48902					0.027191324691784757
PQLVQALKY	9	Unmodified	_PQLVQALKY_					0	0	0		ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2930908203125	2	530.313492	1058.61243	-0.71238	-0.00037778	2.5307	0.0013421	1.8183	0.00096428	530.8186338043646	92.699	0.91444	92.699	92.024	92.938	0					30	20	2	0	0	0	0.20789	1	9021	9021		30.504	11.4	1	70101			43036	3851	28740	28753	48903	48903					0.08546906374044738
PQNIWDNLY	9	Unmodified	_PQNIWDNLY_					0	0	0		ENSG00000077254|ENST00000370794|USP33;nc|ENSG00000077254|Q8TEY7|USP33;nc|ENSG00000077254|Q8TEY7-3|USP33;ENST00000477949.1_1_1:78177422-78179066:-|nuORF	ENSG00000077254|ENST00000370794|USP33	ENSG00000077254|ENST00000370794|USP33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.7796020507812	2	581.780013	1161.54547	-0.53064	-0.00030872	-0.2437	-0.00014178	-0.77434	-0.0004505	581.7797517853181	44.667	0.96264	44.644	44.263	45.226	-0.023079					61	21	4	0	0	0	0.35373	1	3499	3499		60.972	0.67798	1	638170			43037	1377	28741	28754	48904	48904					-0.028837489077204737
PQNQELTY	8	Unmodified	_PQNQELTY_					0	0	0			REV__ENST00000261609.11_1_15:28538126-28544646:-|nuORF	REV__ENST00000261609.11_1_15:28538126-28544646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.73785400390625	2	496.737814	991.461075	-0.64505	-0.00032042	0.46951	0.00023322	-0.17554	-8.7199E-05	496.73789577618413	49.436	0.77881	49.896	49.582	50.36	0.45983					41	18	3	0	0	0	0.3646	2	4812	4801;4812		85.359	26.578	1	2073900	+		43038	24397	28742	28755	48905;48906	48906					-0.03499699724488892
PQNQELTY	8	Unmodified	_PQNQELTY_					0	0	0			REV__ENST00000261609.11_1_15:28538126-28544646:-|nuORF	REV__ENST00000261609.11_1_15:28538126-28544646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.73724365234375	2	496.737814	991.461075	0.29591	0.00014699	-0.60377	-0.00029992	-0.30787	-0.00015293	496.73738035442267	49.293	0.64927	50.193	49.883	50.532	0.89957					37	15	3	0	0	0	0.3646	1	4798	4798		85.359	21.152	1	2299700	+		43039	24397	28742	28755	48907	48907					-0.03499699724488892
PQNQELTY	8	Unmodified	_PQNQELTY_					0	0	0			REV__ENST00000261609.11_1_15:28538126-28544646:-|nuORF	REV__ENST00000261609.11_1_15:28538126-28544646:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	496.737814	991.461075	-0.64505	-0.00032042	0.46951	0.00023322	-0.17554	-8.7199E-05	496.73789577618413	49.436	0.77881	49.896	49.582	50.36	0.45983	-0.14829	0.00064587	NaN	85.359	41	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2073900	+		43040	24397	28742	28755							-0.03499699724488892
PQNQELTY	8	Unmodified	_PQNQELTY_					0	0	0			REV__ENST00000261609.11_1_15:28538126-28544646:-|nuORF	REV__ENST00000261609.11_1_15:28538126-28544646:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	496.737814	991.461075	0.29591	0.00014699	-0.60377	-0.00029992	-0.30787	-0.00015293	496.73738035442267	49.293	0.64927	50.193	49.883	50.532	0.89957	0.14829	-0.0004204	NaN	85.359	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2299700	+		43041	24397	28742	28755							-0.03499699724488892
PQNSNEGWEE	10	Unmodified	_PQNSNEGWEE_					0	0	0		nc|ENSG00000132972|Q9BXT8-4|RNF17;ENSG00000132972|ENST00000255324|RNF17;nc|ENSG00000132972|Q9BXT8-1|RNF17;nc|ENSG00000132972|Q9BXT8-5|RNF17	nc|ENSG00000132972|Q9BXT8-4|RNF17	nc|ENSG00000132972|Q9BXT8-4|RNF17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	595.2422485351562	2	595.241449	1188.46835	-0.59546	-0.00035444	1.7063	0.0010157	1.1109	0.00066123	595.2423120609167	64.87	0.63185	64.875	64.544	65.176	0.0046997					42	17	3	0	0	0	0.57924	1	6080	6080		51.193	11.94	1	350880			43042	3847	28743	28756	48908	48908					-0.11835011914718052
PQPAGWAQLSE	11	Unmodified	_PQPAGWAQLSE_					0	0	0			REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.1564331054688	2	592.290745	1182.56694	0.52639	0.00031177	-1.3414	-0.0007945	-0.81502	-0.00048273	592.28970145447	60.13	0.59161	60.247	59.965	60.556	0.11676					34	20	3	0	0	0	0.17527	1	5192	5192		47.96	18.81	1	146830	+		43043	17719	28744	28757	48909	48909					-0.017043638790028126
PQPAGWAQLSE	11	Unmodified	_PQPAGWAQLSE_					0	0	0			REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	592.290745	1182.56694	-0.85694	-0.00050756	0.26189	0.00015512	-0.59505	-0.00035244	592.2907723561813	60.256	0.52073	60.256	60.06	60.58	0	0.018291	0.00026318	NaN	47.96	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119210	+		43044	17719	28744	28757							-0.017043638790028126
PQPAGWAQLSE	11	Unmodified	_PQPAGWAQLSE_					0	0	0			REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	592.290745	1182.56694	-0.62967	-0.00037295	0.045738	2.709E-05	-0.58393	-0.00034586	592.2906507345382	60.29	0.57591	60.276	60.075	60.651	-0.013733	0.038114	7.1239E-06	NaN	47.96	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164400	+		43045	17719	28744	28757							-0.017043638790028126
PQPAGWAQLSE	11	Unmodified	_PQPAGWAQLSE_					0	0	0			REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	592.290745	1182.56694	-2.5194	-0.0014922	1.8896	0.0011192	-0.62982	-0.00037304	592.2916434901099	60.153	0.6777	60.185	59.833	60.51	0.032822	-0.05273	0.0021913	NaN	47.96	40	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	237140	+		43046	17719	28744	28757							-0.017043638790028126
PQPAGWAQLSE	11	Unmodified	_PQPAGWAQLSE_					0	0	0			REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	592.290745	1182.56694	0.79447	0.00047056	-0.69275	-0.00041031	0.10172	6.0249E-05	592.2897721189954	60.186	0.46554	60.28	60.036	60.501	0.094059	0.042339	-0.00086767	NaN	47.96	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171930	+		43047	17719	28744	28757							-0.017043638790028126
PQPAPRTL	8	Unmodified	_PQPAPRTL_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A;ENST00000583079.1_1_17:18023566-18025792:+|nuORF	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2561340332031	2	440.255977	878.497401	0.43383	0.000191	-1.7245	-0.00075924	-1.2907	-0.00056825	440.2551344280369	66.668	0.61041	66.795	66.527	67.137	0.12649					60	27	3	0	0	0	0.884	1	5926	5926		33.516	3.0119	1	272000			43048	1679	28745	28758	48910	48910					0.05329221962904285
PQPAPRTL	8	Unmodified	_PQPAPRTL_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A;ENST00000583079.1_1_17:18023566-18025792:+|nuORF	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.256103515625	2	440.255977	878.497401	0.25826	0.0001137	-1.4885	-0.00065531	-1.2302	-0.00054161	440.2551628141125	62.575	1.3839	63.129	62.257	63.641	0.5545					72	31	3	0	0	0	0.87922	1	6672	6672		31.955	2.8053	1	690880			43049	1679	28745	28758	48911	48911					0.05329221962904285
PQPAPRTL	8	Unmodified	_PQPAPRTL_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A;ENST00000583079.1_1_17:18023566-18025792:+|nuORF	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	440.255977	878.497401	0.012968	5.7092E-06	-1.337	-0.00058861	-1.324	-0.0005829	440.25512638652197	66.562	0.17335	66.947	66.851	67.024	0.38581	0.11567	-0.00060685	NaN	33.516	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42268			43050	1679	28745	28758							0.05329221962904285
PQPAPVSF	8	Unmodified	_PQPAPVSF_					0	0	0			REV__ENST00000425888.1_1_3:196293984-196295328:-|nuORF	REV__ENST00000425888.1_1_3:196293984-196295328:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.7510070800781	2	421.723978	841.433404	0.59566	0.0002512	-0.60098	-0.00025345	-0.0053264	-2.2463E-06	421.72345598251786	77.317	0.47137	77.722	77.547	78.018	0.4053					11	10	2	0	0	0	0.4196	1	8772	8772		12.207	0	1	98177	+		43051	26539	28746	28759	48912	48912					0.006344418059484269
PQPDGEASQTE	11	Unmodified	_PQPDGEASQTE_					0	0	0		ENSG00000149115|ENST00000358252|TNKS1BP1;ENST00000427750.2_1_11:57068016-57070427:-|nuORF	ENSG00000149115|ENST00000358252|TNKS1BP1	ENSG00000149115|ENST00000358252|TNKS1BP1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	579.8038330078125	2	579.749107	1157.48366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.196	1	22.244	21.744	22.744	0.048553								0	0	0	0.56276	1	644	644		26.063	3.4837	1				43052	4997	28747	28760	48913	48913					-0.08878145117523673
PQPLPKQH	8	Unmodified	_PQPLPKQH_					0	0	0			REV__ENSG00000225190|ENST00000430334|PLEKHM1	REV__ENSG00000225190|ENST00000430334|PLEKHM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7672119140625	2	472.769252	943.52395	-0.41041	-0.00019403	-3.7134	-0.0017556	-4.1238	-0.0019496	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.86288	1	8589	8589		26.796	0	1	590200	+		43053	23737	28748	28761	48914	48914					0.04992910854218735
PQPLQHKP	8	Unmodified	_PQPLQHKP_					0	0	0		ENST00000538872.5_1_12:248427-266301:+|nuORF	ENST00000538872.5_1_12:248427-266301:+|nuORF	ENST00000538872.5_1_12:248427-266301:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7672424316406	2	472.769252	943.52395	-0.10807	-5.1094E-05	-4.0843	-0.0019309	-4.1924	-0.001982	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.87922	1	8478	8478		31.955	1.6371	1	501240			43054	13472	28749	28762	48915	48915					0.04992910854218735
PQPRRTRKTR	10	Unmodified	_PQPRRTRKTR_					0	0	0			REV__nc|ENSG00000158815|O60258-2|FGF17	REV__nc|ENSG00000158815|O60258-2|FGF17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.59771728515625	3	432.597088	1294.76943	-0.16962	-7.3379E-05	1.4594	0.00063134	1.2898	0.00055796	432.5976970384716	106.55	1.2774	106.52	105.86	107.13	-0.025146					98	24	5	0	0	0	0.8486	1	11602	11602		12.957	0	1	15884000	+		43055	20623	28750	28763	48916	48916					0.13384004036925035
PQPRSALQ	8	Unmodified	_PQPRSALQ_					0	0	0		ENSG00000167972|ENST00000301732|ABCA3	ENSG00000167972|ENST00000301732|ABCA3	ENSG00000167972|ENST00000301732|ABCA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.7513732910156	2	448.751059	895.487565	-1.1604	-0.00052074	1.4696	0.00065951	0.30923	0.00013877	448.75149624669854	27.493	1.0894	27.318	27.016	28.105	-0.17559					64	24	5	0	0	0	0.53378	1	1577	1577		74.255	2.9593	1	1128500			43056	6347	28751	28764	48917	48917					0.03564033957513857
PQPTPPPQ	8	Unmodified	_PQPTPPPQ_					0	0	0			REV__nc|ENSG00000204463|P46379-5|BAG6	REV__nc|ENSG00000204463|P46379-5|BAG6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2270202636719	2	431.226885	860.439217	0.2459	0.00010604	0.35379	0.00015256	0.59969	0.0002586	431.22697269182805	25.663	1.9834	25.406	24.638	26.622	-0.25721					115	44	5	0	0	0	0.60357	1	1361	1361		71.296	13.484	1	5038700	+		43057	23494	28752	28765	48918	48918					0.0034154031761772785
PQPVAPSYSY	10	Unmodified	_PQPVAPSYSY_					0	0	0		nc|ENSG00000142687|Q8IZA0-2|KIAA0319L;ENSG00000142687|ENST00000325722|KIAA0319L	nc|ENSG00000142687|Q8IZA0-2|KIAA0319L	nc|ENSG00000142687|Q8IZA0-2|KIAA0319L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.766845703125	2	554.769114	1107.52368	-0.22767	-0.0001263	-2.3303	-0.0012928	-2.558	-0.0014191	554.7672775876852	34.559	0.95993	34.565	34.015	34.975	0.0063934					45	22	3	0	0	0	0.77314	1	2126	2126		40.778	0.20554	1	134960			43058	4581	28753	28766	48919	48919					-0.025785536562807465
PQPVLVHVKD	10	Unmodified	_PQPVLVHVKD_					0	0	0		nc|ENSG00000166589|O75309-3|CDH16;nc|ENSG00000166589|O75309-4|CDH16;nc|ENSG00000166589|O75309-2|CDH16;ENSG00000166589|ENST00000299752|CDH16	nc|ENSG00000166589|O75309-3|CDH16	nc|ENSG00000166589|O75309-3|CDH16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.3304443359375	2	566.329673	1130.64479	0.94269	0.00053387	-0.36104	-0.00020447	0.58165	0.00032941	566.3293318558589	17.636	0.26825	17.025	16.844	17.112	-0.6107					10	6	2	0	0	0	0.86587	1	295	295		29.17	6.5904	1	56592			43059	6214	28754	28767	48920	48920					0.08469693777055909
PQPWVRLVF	9	Unmodified	_PQPWVRLVF_					0	0	0			REV__ENST00000554581.5_1_14:105236164-105236665:-|nuORF	REV__ENST00000554581.5_1_14:105236164-105236665:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.330810546875	2	571.329476	1140.6444	-1.1055	-0.00063161	3.9189	0.002239	2.8134	0.0016074	571.3317125893625	102.4	2.1601	102.42	101.65	103.81	0.01989					122	52	4	0	0	0	0.7932	1	10964	10964		24.203	1.1603	1	2384600	+		43060	28666	28755	28768	48921	48921					0.07970318847833369
PQQAKKLGY	9	Unmodified	_PQQAKKLGY_					0	0	0		ENSG00000124201|ENST00000396105|ZNFX1;nc|ENSG00000124201|Q9P2E3-2|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.79345703125	2	516.795466	1031.57638	-0.83709	-0.0004326	-3.0347	-0.0015683	-3.8718	-0.0020009	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.69914	1	8654	8654		40.573	4.9543	1	490270			43061	3316	28756	28769	48922	48922					0.06185449197187154
PQQAKKLGY	9	Unmodified	_PQQAKKLGY_					0	0	0		ENSG00000124201|ENST00000396105|ZNFX1;nc|ENSG00000124201|Q9P2E3-2|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7935180664062	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.72402	1	8791	8791		38.806	3.1879	1	817800			43062	3316	28756	28769	48923	48923					0.06185449197187154
PQQGLPGLS	9	Unmodified	_PQQGLPGLS_					0	0	0		ENSG00000161021|ENST00000292599|MAML1	ENSG00000161021|ENST00000292599|MAML1	ENSG00000161021|ENST00000292599|MAML1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7608947753906	2	448.745442	895.476331	-0.038001	-1.7053E-05	0.80271	0.00036021	0.76471	0.00034316	448.7456611213184	23.029	0.57392	22.61	22.276	22.85	-0.41879					21	13	2	0	0	0	0.20789	1	1010	1010		29.15	0	1	21820			43063	5627	28757	28770	48924	48924					0.024412118633904356
PQQRYTSAF	9	Unmodified	_PQQRYTSAF_					0	0	0			REV__ENSG00000129038|ENST00000261921|LOXL1	REV__ENSG00000129038|ENST00000261921|LOXL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.2705078125	2	549.272355	1096.53016	-0.1749	-9.6065E-05	-1.3023	-0.00071532	-1.4772	-0.00081138	549.2716195145375	43.695	0.73362	43.668	43.317	44.05	-0.026764					25	17	2	0	0	0	0.28875	1	3343	3343		65.803	11.027	1	227470	+		43064	18802	28758	28771	48925	48925					-0.01424615704900134
PQQRYTSAF	9	Unmodified	_PQQRYTSAF_					0	0	0			REV__ENSG00000129038|ENST00000261921|LOXL1	REV__ENSG00000129038|ENST00000261921|LOXL1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	549.272355	1096.53016	0.12965	7.1211E-05	-0.43884	-0.00024104	-0.30919	-0.00016983	549.2720424745052	43.762	0.45013	43.771	43.434	43.884	0.0084534	0.14286	0.00045982	NaN	65.803	23	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	180610	+		43065	18802	28758	28771							-0.01424615704900134
PQQRYTSAF	9	Unmodified	_PQQRYTSAF_					0	0	0			REV__ENSG00000129038|ENST00000261921|LOXL1	REV__ENSG00000129038|ENST00000261921|LOXL1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	549.272355	1096.53016	0.12341	6.7787E-05	-1.4473	-0.00079498	-1.3239	-0.0007272	549.2715263272654	43.619	0.52872	43.569	43.353	43.881	-0.050308	-0.058686	-0.00064806	NaN	65.803	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	152270	+		43066	18802	28758	28771							-0.01424615704900134
PQQSRAPGG	9	Unmodified	_PQQSRAPGG_					0	0	0		ENSG00000180730|ENST00000319420|SHISA2	ENSG00000180730|ENST00000319420|SHISA2	ENSG00000180730|ENST00000319420|SHISA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.2322692871094	2	449.230491	896.446428	-0.14348	-6.4457E-05	0.39856	0.00017905	0.25508	0.00011459	449.2306007992336	83.429	3.7259	83.496	82.088	85.814	0.066719					221	85	3	0	0	0	0.76255	1	8310	8310		35.618	0	1	236580			43067	7341	28759	28772	48926	48926					-0.005937270819458718
PQQVSSPG	8	Unmodified	_PQQVSSPG_					0	0	0			REV__nc|ENSG00000109756|Q9Y4G8|RAPGEF2	REV__nc|ENSG00000109756|Q9Y4G8|RAPGEF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2008972167969	2	400.200867	798.387182	-1.8507	-0.00074064	-0.79596	-0.00031855	-2.6466	-0.0010592	400.2020327655788	68.039	1.0961	68.174	67.814	68.91	0.13522					55	41	2	0	0	0	0.87922	1	6140	6140		31.955	1.4512	1	183560	+		43068	17771	28760	28773	48927	48927					-0.020076230961308283
PQRKSKKKKK	10	Unmodified	_PQRKSKKKKK_					0	0	0		ENST00000261798.9_1_5:148872814-148873015:-|nuORF	ENST00000261798.9_1_5:148872814-148873015:-|nuORF	ENST00000261798.9_1_5:148872814-148873015:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	628.41943359375	2	628.419688	1254.82482	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.602	1	19.579	19.079	20.079	-0.023342								0	0	0	0.45132	1	426	426		14.865	0.72775	1				43069	9416	28761	28774	48928	48928					0.20760417504675388
PQRLFECF	8	Unmodified	_PQRLFECF_					0	0	0		ENST00000442011.6_1_5:135398935-135399049:+|nuORF	ENST00000442011.6_1_5:135398935-135399049:+|nuORF	ENST00000442011.6_1_5:135398935-135399049:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.2576904296875	2	520.25512	1038.49569	1.8061	0.00093964	4.2509	0.0022115	6.057	0.0031512	520.257174021583	94.655	0.68703	95.087	94.713	95.4	0.4324					35	15	3	0	0	0	0.36381	1	11288	11288		82.305	2.3658	1	692230			43070	11789	28762	28775	48929	48929					-0.022021551173565967
PQRQCAPL	8	Unmodified	_PQRQCAPL_					0	0	0			REV__ENST00000352385.2_1_15:65676444-65676708:-|nuORF	REV__ENST00000352385.2_1_15:65676444-65676708:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.58087158203125	2	456.739637	911.464721	0.00014637	6.6853E-08	0.20234	9.2419E-05	0.20249	9.2486E-05	456.7393836229648	19.024	0.43093	18.547	18.171	18.602	-0.47694					10	9	2	0	0	0	0.4196	1	423	423		14.664	0	1	11155	+		43071	25344	28763	28776	48930	48930					0.0054469156839331845
PQRQKVGT	8	Unmodified	_PQRQKVGT_					0	0	0		ENST00000546624.2_1_12:88177101-88177509:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140154319-140155077:-|nuORF	ENST00000546624.2_1_12:88177101-88177509:-|nuORF	ENST00000546624.2_1_12:88177101-88177509:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.26123046875	2	457.264333	912.514114	-1.2803	-0.00058543	1.4305	0.00065413	0.15023	6.8693E-05	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.81548	1	7246	7246		20.482	1.1219	1	812040			43072	3882	28764	28777	48931	48931					0.05435722848869773
PQRRGPRVP	9	Unmodified	_PQRRGPRVP_					0	0	0		ENST00000275732.5_1_7:100279114-100279345:-|nuORF	ENST00000275732.5_1_7:100279114-100279345:-|nuORF	ENST00000275732.5_1_7:100279114-100279345:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8167724609375	2	531.817599	1061.62064	1.1723	0.00062347	-2.558	-0.0013604	-1.3857	-0.00073692	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.78058	1	9126	9126		30.504	2.6214	1	4413000			43073	9599	28765	28778	48932	48932					0.09229898134049108
PQRRVRQRH	9	Unmodified	_PQRRVRQRH_					0	0	0		ENST00000522437.1_1_15:55787374-55790501:-|nuORF	ENST00000522437.1_1_15:55787374-55790501:-|nuORF	ENST00000522437.1_1_15:55787374-55790501:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.24395751953125	3	411.578028	1231.71225	2.9451	0.0012121	-2.9534	-0.0012156	-0.0083485	-3.4361E-06	411.57687378707305	102.71	0.27866	103.01	102.85	103.13	0.29864					12	9	2	0	0	0	0.20789	1	12521	12521		8.6937	0	1	981670			43074	13187	28766	28779	48933	48933					0.10566581551233867
PQRTKRRKRKQ	11	Unmodified	_PQRTKRRKRKQ_					0	0	0			REV__ENSG00000112118|ENST00000596288|MCM3	REV__ENSG00000112118|ENST00000596288|MCM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.6462097167969	3	494.646442	1480.9175	0.75341	0.00037267	-0.72706	-0.00035964	0.026355	1.3037E-05	494.64592146049307	18.012	0.68905	17.988	17.778	18.467	-0.024035					89	32	4	0	0	0	0.77803	1	288	288		15.921	7.1213	1	750670	+		43075	17915	28767	28780	48934	48934					0.1962731529076791
PQRTKRRKRKQ	11	Unmodified	_PQRTKRRKRKQ_					0	0	0			REV__ENSG00000112118|ENST00000596288|MCM3	REV__ENSG00000112118|ENST00000596288|MCM3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	494.646442	1480.9175	-0.72365	-0.00035795	0.54937	0.00027175	-0.17427	-8.6203E-05	494.64675912184777	18.139	0.71388	18.184	18.028	18.742	0.044048	0.1043	0.00088114	NaN	15.921	78	34	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	503220	+		43076	17915	28767	28780							0.1962731529076791
PQRTKRRKRKQ	11	Unmodified	_PQRTKRRKRKQ_					0	0	0			REV__ENSG00000112118|ENST00000596288|MCM3	REV__ENSG00000112118|ENST00000596288|MCM3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	494.646442	1480.9175	0.076173	3.7679E-05	-0.22285	-0.00011023	-0.14668	-7.2553E-05	494.64634392117614	18	0.57933	18.067	17.904	18.483	0.066298	-0.012706	-0.00026479	NaN	15.921	57	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	765510	+		43077	17915	28767	28780							0.1962731529076791
PQRTKRRKRKQ	11	Unmodified	_PQRTKRRKRKQ_					0	0	0			REV__ENSG00000112118|ENST00000596288|MCM3	REV__ENSG00000112118|ENST00000596288|MCM3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	494.646442	1480.9175	0.75341	0.00037267	-0.72706	-0.00035964	0.026355	1.3037E-05	494.64592146049307	18.012	0.68905	17.988	17.778	18.467	-0.024035	-0.091593	-0.001013	NaN	15.921	89	32	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	750670	+		43078	17915	28767	28780							0.1962731529076791
PQRVRPGPR	9	Unmodified	_PQRVRPGPR_					0	0	0			REV__ENST00000356628.3_1_9:140195350-140195905:-|nuORF	REV__ENST00000356628.3_1_9:140195350-140195905:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8170166015625	2	531.817599	1061.62064	1.1723	0.00062347	-2.558	-0.0013604	-1.3857	-0.00073692	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.78983	1	8949	8949		27.882	2.3082	1	4413000	+		43079	25392	28768	28781	48935	48935					0.09229898134049108
PQSGKPRPG	9	Unmodified	_PQSGKPRPG_					0	0	0		ENST00000398319.6_1_22:24407913-24408033:+|nuORF	ENST00000398319.6_1_22:24407913-24408033:+|nuORF	ENST00000398319.6_1_22:24407913-24408033:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	462.25469970703125	2	462.256508	922.498464	-0.32553	-0.00015048	-1.7223	-0.00079615	-2.0478	-0.00094663	462.25543964025144	50.961	0.96496	50.969	50.757	51.722	0.0077438					46	28	2	0	0	0	0.69624	1	4397	4397		40.778	2.9666	1	164860			43080	11182	28769	28782	48936	48936					0.03411436331805362
PQSKDAQY	8	Unmodified	_PQSKDAQY_					0	0	0		nc|ENSG00000137177|Q9H1H9-3|KIF13A;nc|ENSG00000137177|Q9H1H9-4|KIF13A;nc|ENSG00000137177|Q9H1H9-2|KIF13A;ENSG00000137177|ENST00000259711|KIF13A	nc|ENSG00000137177|Q9H1H9-3|KIF13A	nc|ENSG00000137177|Q9H1H9-3|KIF13A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7231750488281	2	468.724707	935.43486	-0.54669	-0.00025625	-2.2958	-0.0010761	-2.8425	-0.0013324	468.72358850102967	75.94	0.89275	76.509	76.184	77.077	0.56836					41	22	2	0	0	0	0.89043	1	8663	8663		35.618	2.8059	1	404970			43081	4176	28770	28783	48937	48937					-0.03543968895951366
PQSPGGNICEY	11	Unmodified	_PQSPGGNICEY_					0	0	0		ENST00000595041.1_1_19:44101260-44101368:+|nuORF	ENST00000595041.1_1_19:44101260-44101368:+|nuORF	ENST00000595041.1_1_19:44101260-44101368:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.7549438476562	2	582.753138	1163.49172	-0.47354	-0.00027596	3.4124	0.0019886	2.9389	0.0017126	582.75508931446	58.628	0.6612	59.181	58.837	59.498	0.55323					33	15	3	0	0	0	0.69248	1	6179	6179		32.751	1.1163	1	514330			43082	14325	28771	28784	48938	48938					-0.0834828940173793
PQSPVSLPAPD	11	Unmodified	_PQSPVSLPAPD_					0	0	0		ENST00000573058.1_1_17:79225874-79226105:-|nuORF	ENST00000573058.1_1_17:79225874-79226105:-|nuORF	ENST00000573058.1_1_17:79225874-79226105:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.2879028320312	2	554.287671	1106.56079	-1.3781	-0.00076384	2.5117	0.0013922	1.1337	0.00062837	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.66929	1	2337	2337		36.447	3.6343	1	328550			43083	14015	28772	28785	48939	48939					0.011771178894832701
PQTANLCTLH	10	Unmodified	_PQTANLCTLH_					0	0	0			REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.27392578125	2	549.274041	1096.53353	-0.3783	-0.00020779	-3.9578	-0.0021739	-4.3361	-0.0023817	549.2717548800646	43.638	0.55167	43.602	43.362	43.914	-0.035816					29	12	3	0	0	0	0.81117	1	3463	3463		38.754	0.94209	1	283590	+		43084	16466	28773	28786	48940	48940					-0.01087688922552843
PQTASPARGR	10	Unmodified	_PQTASPARGR_					0	0	0		ENSG00000120210|ENST00000381641|INSL6	ENSG00000120210|ENST00000381641|INSL6	ENSG00000120210|ENST00000381641|INSL6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	520.9838256835938	2	520.783422	1039.55229	3.1724	0.0016521	-1.7805	-0.00092727	1.3918	0.00072485	520.7825400310666	108.48	0.38823	108.44	108.28	108.67	-0.031494					28	17	3	0	0	0	0.37624	1	12020	12020		31.634	4.9414	1	1713700			43085	3117	28774	28787	48941	48941					0.03409608763513461
PQTELLRILGQ	11	Unmodified	_PQTELLRILGQ_					0	0	0			REV__chr19:17779232-17781231|31|27.94|0.0|12.51|+|0|TE_info:L2a,L2a_dup157553,L2,LINE,donor,-,17778935,17779232|None,FCHO1|1	REV__chr19:17779232-17781231|31|27.94|0.0|12.51|+|0|TE_info:L2a,L2a_dup157553,L2,LINE,donor,-,17778935,17779232|None,FCHO1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3744506835938	2	634.372069	1266.72959	6.6614	0.0042258	1.1149	0.00070728	7.7763	0.0049331	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.61369	1	13454	13454		42.864	5.0528	1	7041100	+		43086	15684	28775	28788	48942	48942					0.10689019522988019
PQTLLLLLLLL	11	Unmodified	_PQTLLLLLLLL_					0	0	0			REV__ENSG00000125810|ENST00000246006|CD93	REV__ENSG00000125810|ENST00000246006|CD93	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.4344482421875	2	625.428325	1248.8421	2.9227	0.0018279	2.5041	0.0015661	5.4268	0.0033941	625.429727159543	108.86	0.68909	108.83	108.52	109.21	-0.029381					65	29	3	0	0	0	0.86165	1	12064	12064		5.2201	1.5358	1	3045400	+		43087	18669	28776	28789	48943	48943					0.2276290026713923
PQTLLVLASL	10	Unmodified	_PQTLLVLASL_					0	0	0			REV__ENSG00000133661|ENST00000372292|SFTPD	REV__ENSG00000133661|ENST00000372292|SFTPD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.3284912109375	2	527.828975	1053.6434	0.26435	0.00013953	-3.9954	-0.0021089	-3.731	-0.0019693	528.3273044269309	37.812	1.0387	37.911	37.623	38.661	0.099277					64	36	2	0	0	0	0.86106	1	2185	2185		33.922	3.418	1	251460	+		43088	19089	28777	28790	48944	48944					0.11872059688266745
PQTLQPPLQ	9	Unmodified	_PQTLQPPLQ_					0	0	0		nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;ENSG00000117523|ENST00000647382|PRRC2C;ENST00000498596.5_1_1:171556213-171560772:+|nuORF	nc|ENSG00000117523|Q9Y520-2|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.285888671875	2	511.287474	1020.5604	0.28253	0.00014445	-1.1271	-0.00057627	-0.84457	-0.00043182	511.2867408773945	41.845	0.72731	41.919	41.584	42.312	0.073418					40	17	3	0	0	0	0.58668	1	2787	2787		47.657	1.6851	1	605380			43089	2984	28778	28791	48945	48945					0.05093742960275449
PQTPPPPQ	8	Unmodified	_PQTPPPPQ_					0	0	0			REV__ENSG00000198723|ENST00000361664|TEX45	REV__ENSG00000198723|ENST00000361664|TEX45	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2272033691406	2	431.226885	860.439217	0.2459	0.00010604	0.35379	0.00015256	0.59969	0.0002586	431.22697269182805	25.663	1.9834	25.406	24.638	26.622	-0.25721					115	44	5	0	0	0	0.36734	1	1337	1337		99.375	0	1	5038700	+		43090	23366	28779	28792	48946	48946					0.0034154031761772785
PQTQLCIYTAS	11	Unmodified	_PQTQLCIYTAS_					0	0	0		ENST00000489288.6_1_12:2986423-2994675:+|nuORF;ENST00000461997.5_1_12:2986378-2997084:+|nuORF;ENST00000538636.5_3_12:2986404-2994675:+|nuORF	ENST00000489288.6_1_12:2986423-2994675:+|nuORF	ENST00000489288.6_1_12:2986423-2994675:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.87939453125	2	612.800088	1223.58562	0.2784	0.0001706	-4.4297	-0.0027145	-4.1513	-0.0025439	612.7959381346409	104.55	0.61616	104.59	104.51	105.12	0.039864					20	14	2	0	0	0	0.16261	1	11375	11375		58.23	7.0372	1	41484			43091	12035	28780	28793	48947	48947					-0.01722570299466497
PQTSNSSMKL	10	Oxidation (M)	_PQTSNSSM(Oxidation (M))KL_		PQTSNSSM(1)KL		PQTSNSSM(48)KL	0	0	1		nc|ENSG00000101333|Q15147-4|PLCB4;ENSG00000101333|ENST00000378473|PLCB4	nc|ENSG00000101333|Q15147-4|PLCB4	nc|ENSG00000101333|Q15147-4|PLCB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7666625976562	2	554.768788	1107.52302	-0.049561	-2.7495E-05	-2.3155	-0.0012845	-2.365	-0.001312	554.7671502833035	34.684	0.90481	34.627	34.262	35.167	-0.056385					37	20	3	0	0	0	0.63899	1	2194	2194		47.96	6.5329	1	137990			43092	1930	28781	28794	48948	48948		37			-0.026437163676291675
PQTVRDLGRS	10	Unmodified	_PQTVRDLGRS_					0	0	0			REV__nc|ENSG00000115289|Q9BSM1-3|PCGF1	REV__nc|ENSG00000115289|Q9BSM1-3|PCGF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.8107299804688	2	564.809636	1127.60472	3.0107	0.0017004	-1.5824	-0.00089378	1.4282	0.00080667	564.8086416193407	110	1.6919	109.97	109.64	111.33	-0.027641					152	59	3	0	0	0	0.82886	1	12183	12183		37.812	3.8899	1	4099500	+		43093	18105	28782	28795	48949	48949					0.04602147106470511
PQVAKVMQ	8	Unmodified	_PQVAKVMQ_					0	0	0			REV__ENSG00000042980|ENST00000265769|ADAM28	REV__ENSG00000042980|ENST00000265769|ADAM28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7548828125	2	450.752213	899.489873	0.36741	0.00016561	4.3918	0.0019796	4.7592	0.0021452	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.87479	1	8215	8215		30.504	0	1	394230	+		43094	16332	28783	28796	48950	48950					0.036107463709754484
PQVAQVRF	8	Unmodified	_PQVAQVRF_					0	0	0			REV__nc|ENSG00000176055|Q68D91-2|MBLAC2	REV__nc|ENSG00000176055|Q68D91-2|MBLAC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7668151855469	2	472.769252	943.52395	-0.10807	-5.1094E-05	-4.0843	-0.0019309	-4.1924	-0.001982	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.88915	1	8539	8539		35.201	6.0512	1	501240	+		43095	22103	28784	28797	48951	48951					0.04992910854230104
PQVASPGTL	9	Unmodified	_PQVASPGTL_					0	0	0			REV__ENST00000292524.5_1_8:145750285-145750465:+|nuORF	REV__ENST00000292524.5_1_8:145750285-145750465:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2381286621094	2	435.239993	868.465432	1.8239	0.00079381	-1.435	-0.00062457	0.38884	0.00016924	435.2392279262753	28.579	0.77385	28.56	28.167	28.941	-0.019405					47	19	3	0	0	0	0.55097	1	1390	1390		49.442	1.7842	1	119490	+		43096	24679	28785	28798	48952	48952					0.025938094890989305
PQVHSRFLQLA	11	Unmodified	_PQVHSRFLQLA_					0	0	0			REV__nc|ENSG00000176170|Q9NYA1-2|SPHK1	REV__nc|ENSG00000176170|Q9NYA1-2|SPHK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3926391601562	2	648.364579	1294.7146	1.6034	0.0010396	1.6145	0.0010468	3.2179	0.0020864	648.3654987011332	105.92	0.19783	106.07	105.92	106.12	0.156					7	4	2	0	0	0	0.17061	1	11305	11305		28.081	0	1	312520	+		43097	30050	28786	28799	48953	48953					0.07903572445684404
PQVIWACRR	9	Unmodified	_PQVIWACRR_					0	0	0		ENST00000594303.5_1_19:58740361-58740478:+|nuORF	ENST00000594303.5_1_19:58740361-58740478:+|nuORF	ENST00000594303.5_1_19:58740361-58740478:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.27099609375	2	564.808385	1127.60222	0.58051	0.00032788	3.7288	0.002106	4.3093	0.0024339	564.8103388185426	50.689	0.49305	51.136	50.845	51.338	0.44761					20	11	2	0	0	0	0.20789	1	4977	4977		23.042	0	1	314520			43098	14317	28787	28800	48954	48954					0.04352020167812043
PQVLLPFGR	9	Unmodified	_PQVLLPFGR_					0	0	0		nc|ENSG00000143552|Q5VU65-2|NUP210L;ENSG00000143552|ENST00000368559|NUP210L	nc|ENSG00000143552|Q5VU65-2|NUP210L	nc|ENSG00000143552|Q5VU65-2|NUP210L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.808837890625	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.78536	1	4642	4642		29.15	0	1	771120			43099	4643	28788	28801	48955	48955					0.09042343439477918
PQVPGRVLF	9	Unmodified	_PQVPGRVLF_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7999572753906	2	506.800552	1011.58655	-1.5095	-0.000765	2.422	0.0012274	0.91248	0.00046244	506.8017338500082	46.598	2.104	46.598	45.336	47.44	0					97	57	2	0	0	0	0.78058	1	3367	3367		30.504	5.0535	1	294110			43100	946	28789	28802	48956	48956					0.08122056922422871
PQVPQCQSANT	11	Unmodified	_PQVPQCQSANT_					0	0	0			REV__ENSG00000147082|ENST00000376042|CCNB3	REV__ENSG00000147082|ENST00000376042|CCNB3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.819091796875	2	586.771862	1171.52917	-0.23571	-0.00013831	3.5987	0.0021116	3.363	0.0019733	586.7738165765549	54.34	1.2168	54.747	54.235	55.452	0.40663					52	28	2	0	0	0	0.17457	1	5498	5498		16.007	0	1	317580	+		43101	20049	28790	28803	48957	48957					-0.04973198136121937
PQVPWSQVLP	10	Unmodified	_PQVPWSQVLP_					0	0	0		ENST00000322313.8_1_2:128458821-128459556:-|nuORF	ENST00000322313.8_1_2:128458821-128459556:-|nuORF	ENST00000322313.8_1_2:128458821-128459556:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.3142700195312	2	575.816399	1149.61824	-0.097475	-5.6127E-05	-0.89219	-0.00051374	-0.98966	-0.00056986	575.8157651749434	16.377	0.27293	15.89	15.779	16.052	-0.48718					8	5	2	0	0	0	0.37624	1	126	126		20.947	13.754	1	77343			43102	10045	28791	28804	48958	48958					0.04942004885697315
PQVTDEWDRIR	11	Unmodified	_PQVTDEWDRIR_					0	0	0			REV__nc|ENSG00000025770|Q6IBW4-2|NCAPH2	REV__nc|ENSG00000025770|Q6IBW4-2|NCAPH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2373962402344	3	472.240635	1413.70008	-0.27444	-0.0001296	-2.5582	-0.0012081	-2.8327	-0.0013377	472.239438281829	26.798	1.4188	26.759	26.096	27.515	-0.038523					50	32	3	0	0	0	0.75121	1	1220	1220		21.78	3.2494	1	131550	+		43103	16259	28792	28805	48959	48959					0.009774555068361224
PQWKLWRLSAL	11	Unmodified	_PQWKLWRLSAL_					0	0	0			REV__nc|ENSG00000114439|Q8WY36-3|BBX	REV__nc|ENSG00000114439|Q8WY36-3|BBX	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.6078796386719	3	466.60659	1396.79794	-0.9304	-0.00043413	3.8121	0.0017788	2.8818	0.0013446	466.6082212965859	101	2.1787	101	99.472	101.65	0					144	51	4	0	0	0	0.76251	1	10166	10166		19.263	2.7328	1	331070	+		43104	29790	28793	28806	48960	48960					0.11541308893515634
PQYLGQPFL	9	Unmodified	_PQYLGQPFL_					0	0	0			REV__ENST00000361357.7_1_17:61772754-61773267:+|nuORF	REV__ENST00000361357.7_1_17:61772754-61773267:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7835693359375	2	531.784567	1061.55458	-0.54009	-0.00028721	-4.1525	-0.0022083	-4.6926	-0.0024955	531.7823629635351	60.499	0.54149	61.053	60.718	61.26	0.55323					26	14	2	0	0	0	0.43338	1	6452	6452		55.504	2.1528	1	507160	+		43105	25499	28794	28807	48961	48961					0.026266444486282126
PRAALEPPQP	10	Unmodified	_PRAALEPPQP_					0	0	0			REV__ENSG00000130700|ENST00000252997|GATA5	REV__ENSG00000130700|ENST00000252997|GATA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.2990112304688	2	538.298373	1074.58219	2.0126	0.0010834	-2.2294	-0.0012001	-0.21685	-0.00011673	538.29703109323	26.01	0.85884	25.579	25.191	26.05	-0.4311					45	19	4	0	0	0	0.80179	1	1426	1426		39.253	0	1	561100	+		43106	18892	28795	28808	48962	48962					0.04788547708835722
PRADSEVY	8	Unmodified	_PRADSEVY_					0	0	0		ENST00000216297.6_1_14:21820216-21820297:-|nuORF	ENST00000216297.6_1_14:21820216-21820297:-|nuORF	ENST00000216297.6_1_14:21820216-21820297:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.724609375	2	468.724707	935.43486	-0.39652	-0.00018586	-2.0289	-0.000951	-2.4254	-0.0011369	468.7236452143359	94.367	1.0112	94.803	94.514	95.525	0.43539					45	25	2	0	0	0	0.89962	1	11312	11312		38.806	4.6336	1	892940			43107	9133	28796	28809	48963	48963					-0.03543968895951366
PRADSLYD	8	Unmodified	_PRADSLYD_					0	0	0		ENST00000379312.7_3_16:67562815-67572402:+|nuORF;ENST00000566920.5_3_16:67563967-67572402:+|nuORF;ENST00000565176.5_3_16:67565474-67572402:+|nuORF;ENST00000566559.5_3_16:67572255-67572402:+|nuORF;ENST00000540839.7_3_16:67563547-67572402:+|nuORF	ENST00000379312.7_3_16:67562815-67572402:+|nuORF	ENST00000379312.7_3_16:67562815-67572402:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.72357177734375	2	468.724707	935.43486	-0.75515	-0.00035396	-1.6747	-0.00078499	-2.4299	-0.001139	468.7237161519137	93.418	1.0486	93.868	93.278	94.327	0.44988					49	24	3	0	0	0	0.87064	1	11203	11203		29.15	2.4566	1	570630			43108	10888	28797	28810	48964	48964					-0.03543968895962735
PRAGTRAP	8	Unmodified	_PRAGTRAP_					0	0	0			REV__ENST00000417456.1_1_1:35442207-35442396:-|nuORF	REV__ENST00000417456.1_1_1:35442207-35442396:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.23809814453125	2	413.238119	824.461684	0.89927	0.00037161	-0.73723	-0.00030465	0.16205	6.6964E-05	413.23775271826133	77.246	5.6199	77.651	75.794	81.414	0.40531					207	140	2	0	0	0	0.89494	1	8631	8631		37.159	0	1	1083000	+		43109	26444	28798	28811	48965	48965					0.04243184505889985
PRALFVAEFLL	11	Unmodified	_PRALFVAEFLL_					0	0	0			REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	638.3779296875	2	638.376623	1274.73869	2.7504	0.0017558	3.4154	0.0021803	6.1658	0.0039361	638.3795990002257	105.19	0.59196	105.15	104.77	105.36	-0.04039					25	13	2	0	0	0	0.70737	1	11592	11592		30.318	3.6248	1	72154	+		43110	24556	28799	28812	48966	48966					0.11231412879305935
PRALFVAEFLL	11	Unmodified	_PRALFVAEFLL_					0	0	0			REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	638.376623	1274.73869	-0.091409	-5.8354E-05	6.3431	0.0040493	6.2517	0.0039909	638.3814343100921	104.99	0.62965	104.98	104.78	105.41	-0.014809	-0.0063796	0.0016674	NaN	30.318	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82134	+		43111	24556	28799	28812							0.11231412879305935
PRALFVAEFLL	11	Unmodified	_PRALFVAEFLL_					0	0	0			REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	638.376623	1274.73869	2.7504	0.0017558	3.4154	0.0021803	6.1658	0.0039361	638.3795990002257	105.19	0.59196	105.15	104.77	105.36	-0.04039	0.16086	-0.0020705	NaN	30.318	25	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72154	+		43112	24556	28799	28812							0.11231412879305935
PRALFVAEFLL	11	Unmodified	_PRALFVAEFLL_					0	0	0			REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	638.376623	1274.73869	1.512	0.00096521	5.2055	0.003323	6.7174	0.0042882	638.8804310130901	104.82	0.75163	104.86	104.55	105.3	0.039864	-0.1252	0.00021499	NaN	30.318	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75313	+		43113	24556	28799	28812							0.11231412879305935
PRALFVAEFLL	11	Unmodified	_PRALFVAEFLL_					0	0	0			REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	638.376623	1274.73869	1.5492	0.000989	5.055	0.003227	6.6042	0.004216	638.3807336955027	104.74	0.60838	104.91	104.57	105.18	0.17096	-0.071039	2.2834E-05	NaN	30.318	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75883	+		43114	24556	28799	28812							0.11231412879305935
PRALFVAEFLL	11	Unmodified	_PRALFVAEFLL_					0	0	0			REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	REV__ENST00000273158.8_1_3:39432942-39433107:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	638.376623	1274.73869	0.93752	0.00059849	6.0697	0.0038748	7.0072	0.0044733	638.3817285419802	104.92	0.61047	105.03	104.62	105.23	0.10766	0.041761	0.0013184	NaN	30.318	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79545	+		43115	24556	28799	28812							0.11231412879305935
PRALGARGHRR	11	Unmodified	_PRALGARGHRR_					0	0	0		nc|ENSG00000101940|Q9H1Z4-2|WDR13;ENSG00000101940|ENST00000376729|WDR13	nc|ENSG00000101940|Q9H1Z4-2|WDR13	nc|ENSG00000101940|Q9H1Z4-2|WDR13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	623.8710327148438	2	623.871228	1245.7279	-1.2116	-0.00075585	-0.14687	-9.1626E-05	-1.3584	-0.00084748	623.8710403744353	104.48	2.0404	104.58	104.1	106.14	0.093857					153	50	5	0	0	0	0.70737	1	11032	11032		30.318	7.7381	1	2931600			43116	1972	28800	28813	48967	48967					0.1148686806823207
PRAPARTG	8	Unmodified	_PRAPARTG_					0	0	0			REV__ENST00000601336.5_1_19:41770758-41770881:+|nuORF	REV__ENST00000601336.5_1_19:41770758-41770881:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2375793457031	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.89494	1	7238	7238		37.159	5.2042	1	2127000	+		43117	29318	28801	28814	48968	48968					0.04243184505901354
PRAPIIAVTRN	11	Unmodified	_PRAPIIAVTRN_					0	0	0		ENST00000565143.1_1_15:72491993-72493046:-|nuORF;nc|ENSG00000067225|P14618-3|PKM;nc|ENSG00000067225|P14618-2|PKM;ENSG00000067225|ENST00000335181|PKM	ENST00000565143.1_1_15:72491993-72493046:-|nuORF	ENST00000565143.1_1_15:72491993-72493046:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3673706054688	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.7434	1	11791	11791		23.523	0.94304	1	64334000			43118	1180	28802	28815	48969	48969					0.12459876308253115
PRAPLRLALPG	11	Unmodified	_PRAPLRLALPG_					0	0	0		ENSG00000181409|ENST00000326724|AATK	ENSG00000181409|ENST00000326724|AATK	ENSG00000181409|ENST00000326724|AATK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.86572265625	2	580.866757	1159.71896	-1.099	-0.0006384	-0.0099015	-5.7514E-06	-1.1089	-0.00064415	580.866642906103	78.68	1.2707	79.091	78.551	79.822	0.4106					73	29	3	0	0	0	0.68378	1	8996	8996		34.173	1.3601	1	1935400			43119	7388	28803	28816	48970	48970					0.14549081659197327
PRARARRAV	9	Unmodified	_PRARARRAV_					0	0	0			REV__ENST00000464873.5_2_3:127872492-127872603:-|nuORF	REV__ENST00000464873.5_2_3:127872492-127872603:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.8314819335938	2	526.83104	1051.64753	-0.66127	-0.00034838	0.99531	0.00052436	0.33404	0.00017598	526.8311257898843	97.27	1.0385	97.27	96.767	97.806	0					60	23	4	0	0	0	0.7932	1	9722	9722		23.042	2.0956	1	213530	+		43120	27101	28804	28817	48971	48971					0.12377006745191466
PRARLRRQ	8	Unmodified	_PRARLRRQ_					0	0	0		ENST00000592217.2_1_19:46271832-46273041:+|nuORF	ENST00000592217.2_1_19:46271832-46273041:+|nuORF	ENST00000592217.2_1_19:46271832-46273041:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.8310546875	2	526.83104	1051.64753	-0.66127	-0.00034838	0.99531	0.00052436	0.33404	0.00017598	526.8311257898843	97.27	1.0385	97.27	96.767	97.806	0					60	23	4	0	0	0	0.81548	1	9752	9752		20.482	0	1	213530			43121	14286	28805	28818	48972	48972					0.12377006745214203
PRARLSSN	8	Unmodified	_PRARLSSN_					0	0	0		ENST00000370803.7_1_X:133507308-133511628:+|nuORF	ENST00000370803.7_1_X:133507308-133511628:+|nuORF	ENST00000370803.7_1_X:133507308-133511628:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.75457763671875	2	450.754133	899.493713	-1.264	-0.00056978	1.3912	0.00062708	0.12712	5.7301E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.90983	1	7799	7799		42.396	6.7778	1	414240			43122	10651	28806	28819	48973	48973					0.03994552189044498
PRARPKKSM	9	Unmodified	_PRARPKKSM_					0	0	0			REV__ENST00000347785.7_1_11:60893761-60894112:+|nuORF	REV__ENST00000347785.7_1_11:60893761-60894112:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	535.8148193359375	2	535.81621	1069.61787	3.1559	0.001691	-0.64084	-0.00034337	2.5151	0.0013476	535.8161013513314	99.289	1.4852	99.235	98.78	100.26	-0.053741					66	34	3	0	0	0	0.7932	1	10751	10751		24.519	3.5723	1	505840	+		43123	25325	28807	28820	48974	48974					0.08584306684861076
PRARPNPV	8	Unmodified	_PRARPNPV_					0	0	0		ENST00000505276.2_1_12:3407303-3409365:-|nuORF	ENST00000505276.2_1_12:3407303-3409365:-|nuORF	ENST00000505276.2_1_12:3407303-3409365:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.7662658691406	2	453.767043	905.519533	0.22799	0.00010345	-2.741	-0.0012438	-2.5131	-0.0011403	453.76577882768925	41.923	1.745	41.996	41.584	43.329	0.073414					97	46	4	0	0	0	0.86288	1	2798	2798		26.796	0	1	672610			43124	12921	28808	28821	48975	48975					0.06299446431319211
PRASALPAP	9	Unmodified	_PRASALPAP_					0	0	0		ENSG00000173762|ENST00000312648|CD7	ENSG00000173762|ENST00000312648|CD7	ENSG00000173762|ENST00000312648|CD7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2553405761719	2	440.255977	878.497401	0.25826	0.0001137	-1.4885	-0.00065531	-1.2302	-0.00054161	440.2551628141125	62.575	1.3839	63.129	62.257	63.641	0.5545					72	31	3	0	0	0	0.7932	1	6711	6711		23.042	1.0826	1	690880			43125	6884	28809	28822	48976	48976					0.05329221962892916
PRASCVSRKPG	11	Unmodified	_PRASCVSRKPG_					0	0	0		ENST00000393640.8_1_16:70414628-70415099:-|nuORF	ENST00000393640.8_1_16:70414628-70415099:-|nuORF	ENST00000393640.8_1_16:70414628-70415099:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	579.8441772460938	2	579.314032	1156.61351	0.88007	0.00050983	-4.1254	-0.0023899	-3.2453	-0.0018801	579.31176352285	102.23	1.0508	102.36	101.89	102.94	0.13522					47	25	3	0	0	0	0.17484	1	10712	10712		38.754	17.068	1	371260			43126	11050	28810	28823	48977	48977					0.04146797471298669
PRASKFLL	8	Unmodified	_PRASKFLL_					0	0	0		nc|ENSG00000153291|O95847-2|SLC25A27;ENSG00000153291|ENST00000371347|SLC25A27	nc|ENSG00000153291|O95847-2|SLC25A27	nc|ENSG00000153291|O95847-2|SLC25A27	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.289794921875	2	466.28982	930.565087	-1.0457	-0.00048758	1.1245	0.00052435	0.078871	3.6777E-05	466.29021591001344	73.859	1.0735	73.986	73.713	74.787	0.1271					83	42	3	0	0	0	0.87922	1	6837	6837		31.955	1.4512	1	958110			43127	5228	28811	28824	48978	48978					0.09702671893705883
PRASLAPSL	9	Unmodified	_PRASLAPSL_					0	0	0		ENST00000316461.8_1_11:62496181-62496406:+|nuORF	ENST00000316461.8_1_11:62496181-62496406:+|nuORF	ENST00000316461.8_1_11:62496181-62496406:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2637634277344	2	456.269084	910.523616	0.60836	0.00027758	-1.4599	-0.00066613	-0.85158	-0.00038855	456.26611812691397	83.937	0.21009	84.085	83.962	84.172	0.14794					6	4	2	0	0	0	0.20789	1	8153	8153		24.519	8.046	1	15898			43128	9984	28812	28825	48979	48979					0.06477491134353386
PRCGVPFTD	9	Unmodified	_PRCGVPFTD_					0	0	0			REV__ENSG00000100253|ENST00000216075|MIOX	REV__ENSG00000100253|ENST00000216075|MIOX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.2379150390625	2	496.236927	990.459301	-0.19806	-9.8285E-05	2.9137	0.0014459	2.7157	0.0013476	496.2381223206561	30.903	0.94662	30.856	30.347	31.293	-0.047064					49	24	3	0	0	0	0.22631	1	1719	1719		71.296	10.324	1	221780	+		43129	17158	28813	28826	48980	48980					-0.03631032014084212
PRCRPRPG	8	Unmodified	_PRCRPRPG_					0	0	0			REV__ENST00000337137.8_1_22:47188430-47189438:+|nuORF	REV__ENST00000337137.8_1_22:47188430-47189438:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.7595520019531	2	469.758695	937.502838	0.22864	0.00010741	3.6642	0.0017213	3.8928	0.0018287	469.7603126237485	40.263	1.3568	40.345	40.004	41.361	0.081345					62	45	2	0	0	0	0.9159	1	2555	2555		44.531	0	1	459690	+		43130	25201	28814	28827	48981	48981					0.03158622273724632
PRCSTLLT	8	Carbamidomethyl (C)	_PRC(Carbamidomethyl (C))STLLT_	PRC(1)STLLT		PRC(42)STLLT		0	1	0			REV__ENST00000263370.2_1_19:41246057-41246498:+|nuORF	REV__ENST00000263370.2_1_19:41246057-41246498:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.25390625	2	474.252577	946.490601	0.90723	0.00043026	3.4537	0.0016379	4.3609	0.0020682	474.2540659981243	22.601	1.5549	22.183	21.652	23.207	-0.41879					50	35	2	0	0	0	0.91005	1	929	929		42.474	8.9589	1	124210	+		43131	24446	28815	28828	48982	48982	297				0.015215410200312363
PRDGKGGL	8	Unmodified	_PRDGKGGL_					0	0	0			REV__ENST00000554086.1_1_14:61773915-61789493:-|nuORF	REV__ENST00000554086.1_1_14:61773915-61789493:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.5549621582031	2	400.224677	798.434801	-0.40514	-0.00016215	2.2548	0.00090243	1.8497	0.00074029	400.2255865138528	16.87	0.29667	16.791	16.595	16.892	-0.079056					13	10	2	0	0	0	0.4196	1	154	154		51.335	33.011	1	34422	+		43132	28658	28816	28829	48983	48983					0.027520758947048307
PRDQTSLKR	9	Unmodified	_PRDQTSLKR_					0	0	0			REV__nc|ENSG00000106078|O75128-6|COBL	REV__nc|ENSG00000106078|O75128-6|COBL	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.8118286132812	2	550.812179	1099.60981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.842	1	26.814	26.314	27.314	-0.027706								0	0	0	0.29134	1	1176	1176		34.173	5.0025	1		+		43133	17596	28817	28830	48984	48984					0.06398450969095393
PRDTVAPTHS	10	Unmodified	_PRDTVAPTHS_					0	0	0		ENST00000534255.1_1_8:145193835-145194452:+|nuORF	ENST00000534255.1_1_8:145193835-145194452:+|nuORF	ENST00000534255.1_1_8:145193835-145194452:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.7743530273438	2	540.775262	1079.53597	0.5811	0.00031424	-1.1208	-0.00060612	-0.53973	-0.00029188	541.2758345643931	31.852	0.40892	31.801	31.604	32.013	-0.051031					14	8	2	0	0	0	0.86218	1	1835	1835		32.812	2.4947	1	47376			43134	13403	28818	28831	48985	48985					-0.0006151719326226157
PRDTVAPTHS	10	Unmodified	_PRDTVAPTHS_					0	0	0		ENST00000534255.1_1_8:145193835-145194452:+|nuORF	ENST00000534255.1_1_8:145193835-145194452:+|nuORF	ENST00000534255.1_1_8:145193835-145194452:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	540.775262	1079.53597	0.03413	1.8457E-05	-0.59233	-0.00032032	-0.5582	-0.00030186	540.7752816127839	31.763	0.32226	31.781	31.587	31.909	0.01836	-0.0064535	0.00022731	NaN	32.812	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30635			43135	13403	28818	28831							-0.0006151719326226157
PRDTVAPTHS	10	Unmodified	_PRDTVAPTHS_					0	0	0		ENST00000534255.1_1_8:145193835-145194452:+|nuORF	ENST00000534255.1_1_8:145193835-145194452:+|nuORF	ENST00000534255.1_1_8:145193835-145194452:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	540.775262	1079.53597	0.40069	0.00021668	-0.76723	-0.0004149	-0.36654	-0.00019822	541.2762390020973	31.787	0.47194	31.781	31.568	32.04	-0.0061455	-0.0068879	3.8152E-05	NaN	32.812	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33850			43136	13403	28818	28831							-0.0006151719326226157
PRDVPPDIL	9	Unmodified	_PRDVPPDIL_					0	0	0		nc|ENSG00000164190|Q6KC79-2|NIPBL;ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-3|NIPBL	nc|ENSG00000164190|Q6KC79-2|NIPBL	nc|ENSG00000164190|Q6KC79-2|NIPBL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.2831115722656	2	511.287474	1020.5604	-1.2853	-0.00065715	-0.086664	-4.431E-05	-1.3719	-0.00070146	511.2874104215347	41.926	2.0437	41.929	41.503	43.546	0.0034142					109	48	4	0	0	0	0.76255	1	3233	3233		35.618	0	1	7262400			43137	5936	28819	28832	48986	48986					0.05093742960275449
PRDVRKLVKTT	11	Unmodified	_PRDVRKLVKTT_					0	0	0		ENSG00000228672|ENST00000434752|PROB1	ENSG00000228672|ENST00000434752|PROB1	ENSG00000228672|ENST00000434752|PROB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2730407714844	3	438.273499	1311.79867	-0.96188	-0.00042157	0.011679	5.1187E-06	-0.9502	-0.00041645	438.27344423982936	106.61	0.75021	106.61	106.14	106.89	0					48	16	4	0	0	0	0.74771	1	11056	11056		22.562	1.5294	1	872140			43138	8723	28820	28833	48987	48987					0.15524103542543344
PREGSHSRRH	10	Unmodified	_PREGSHSRRH_					0	0	0			REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.8790588378906	3	406.878143	1217.6126	0.91173	0.00037096	1.7033	0.00069304	2.6151	0.001064	406.87878322795524	18.247	0.71156	18.323	18.125	18.837	0.075441					39	23	3	0	0	0	0.71918	1	260	260		43.651	3.5926	1	460920	+		43139	22810	28821	28834	48988	48988					0.012497191465854485
PREGSHSRRH	10	Unmodified	_PREGSHSRRH_					0	0	0			REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.8791198730469	3	406.878143	1217.6126	1.6649	0.00067741	0.93376	0.00037993	2.5987	0.0010573	406.87846849147417	19.102	1.2195	18.632	18.365	19.584	-0.46967					72	26	5	0	0	0	0.57305	1	475	475		51.528	0.33506	1	844720	+		43140	22810	28821	28834	48989	48989					0.012497191465854485
PREGSHSRRH	10	Unmodified	_PREGSHSRRH_					0	0	0			REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	406.878143	1217.6126	-1.9388	-0.00078886	4.519	0.0018387	2.5801	0.0010498	406.8798822438176	18.445	0.46535	18.489	18.293	18.758	0.044048	0.051049	0.0031914	NaN	51.528	54	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	604540	+		43141	22810	28821	28834							0.012497191465854485
PREGSHSRRH	10	Unmodified	_PREGSHSRRH_					0	0	0			REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	406.878143	1217.6126	0.012698	5.1664E-06	2.5538	0.0010391	2.5665	0.0010442	406.87917125660965	18.301	0.42861	18.367	18.21	18.639	0.066296	-0.071278	0.00079261	NaN	51.528	59	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	605120	+		43142	22810	28821	28834							0.012497191465854485
PREGSHSRRH	10	Unmodified	_PREGSHSRRH_					0	0	0			REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	406.878143	1217.6126	0.45885	0.00018669	2.2134	0.00090059	2.6723	0.0010873	406.87894631730694	18.36	0.46298	18.336	18.158	18.621	-0.024035	-0.10236	0.00037715	NaN	51.528	52	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	536680	+		43143	22810	28821	28834							0.012497191465854485
PREKLLNK	8	Unmodified	_PREKLLNK_					0	0	0			REV__ENST00000372847.1_1_9:131140285-131150177:+|nuORF	REV__ENST00000372847.1_1_9:131140285-131150177:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.3108215332031	2	499.311284	996.608014	0.73158	0.00036529	-0.81843	-0.00040865	-0.086849	-4.3365E-05	499.3107238652696	32.392	0.55627	32.499	32.232	32.788	0.10707					25	12	3	0	0	0	0.93786	1	2279	2279		53.351	2.016	1	273470	+		43144	21358	28822	28835	48990	48990					0.1095744195114321
PREPIPVNELE	11	Unmodified	_PREPIPVNELE_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	646.8513793945312	2	646.845884	1291.67722	-0.7227	-0.00046747	1.0427	0.00067444	0.31995	0.00020696	646.8465020432385	51.878	0.80072	51.878	51.553	52.354	0					27	20	2	0	0	0	0.67778	1	4208	4208		35.152	3.6222	1	61814	+		43145	17368	28823	28836	48991	48991					0.043044363893841364
PREPIPVNELE	11	Unmodified	_PREPIPVNELE_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	646.845884	1291.67722	0.08855	5.7278E-05	1.3342	0.00086302	1.4228	0.0009203	646.8463110188917	51.747	0.3043	51.745	51.57	51.874	-0.0020447	-0.066365	0.001267	NaN	35.152	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35367	+		43146	17368	28823	28836							0.043044363893841364
PREPIPVNELE	11	Unmodified	_PREPIPVNELE_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	646.845884	1291.67722	1.5133	0.0009789	-1.2102	-0.00078279	0.30318	0.00019611	646.8451814342149	51.738	0.47779	51.773	51.551	52.029	0.034588	-0.038103	-0.0020247	NaN	35.152	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142440	+		43147	17368	28823	28836							0.043044363893841364
PREPIPVNELE	11	Unmodified	_PREPIPVNELE_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	646.845884	1291.67722	0.50306	0.0003254	-0.59135	-0.00038251	-0.088289	-5.7109E-05	647.3470598071119	51.754	0.54436	51.813	51.614	52.158	0.059719	0.0023423	-0.0012241	NaN	35.152	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147550	+		43148	17368	28823	28836							0.043044363893841364
PREPIPVNELE	11	Unmodified	_PREPIPVNELE_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	646.845884	1291.67722	0.14187	9.1767E-05	0.39328	0.00025439	0.53515	0.00034616	646.8458907305754	51.931	0.61763	51.846	51.547	52.165	-0.084538	0.035335	4.9703E-05	NaN	35.152	29	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122320	+		43149	17368	28823	28836							0.043044363893841364
PRERAPAS	8	Unmodified	_PRERAPAS_					0	0	0		ENST00000437600.8_1_7:101926770-101927016:+|nuORF	ENST00000437600.8_1_7:101926770-101927016:+|nuORF	ENST00000437600.8_1_7:101926770-101927016:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2407531738281	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.90465	1	7912	7912		40.573	0	1	1094000			43150	11738	28824	28837	48992	48992					0.021228632976999506
PRERPAGG	8	Unmodified	_PRERPAGG_					0	0	0		ENST00000447263.1_1_1:39980824-39982159:+|nuORF	ENST00000447263.1_1_1:39980824-39982159:+|nuORF	ENST00000447263.1_1_1:39980824-39982159:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2268371582031	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.92457	1	7555	7555		47.916	1.9636	1	743780			43151	11845	28825	28838	48993	48993					0.015265941262327942
PRFGLMETLEQ	11	Unmodified	_PRFGLMETLEQ_					0	0	0			REV__ENSG00000197106|ENST00000331565|SLC6A17	REV__ENSG00000197106|ENST00000331565|SLC6A17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.8932800292969	3	440.892067	1319.65437	-0.33489	-0.00014765	1.8833	0.00083035	1.5485	0.0006827	440.8932298445933	32.635	0.76971	32.761	32.332	33.102	0.12642					51	17	4	0	0	0	0.42858	1	2300	2300		57.149	18.395	1	819560	+		43152	23197	28826	28839	48994	48994					0.007330940002475472
PRFGLMETLEQ	11	Unmodified	_PRFGLMETLEQ_					0	0	0			REV__ENSG00000197106|ENST00000331565|SLC6A17	REV__ENSG00000197106|ENST00000331565|SLC6A17	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	440.892067	1319.65437	-0.33489	-0.00014765	1.8833	0.00083035	1.5485	0.0006827	440.8932298445933	32.635	0.76971	32.761	32.332	33.102	0.12642	-0.027098	0.00052898	NaN	57.149	51	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	819560	+		43153	23197	28826	28839							0.007330940002475472
PRFGLMETLEQ	11	Unmodified	_PRFGLMETLEQ_					0	0	0			REV__ENSG00000197106|ENST00000331565|SLC6A17	REV__ENSG00000197106|ENST00000331565|SLC6A17	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	440.892067	1319.65437	0.97602	0.00043032	1.2362	0.00054502	2.2122	0.00097534	440.89266419029946	32.604	0.89175	32.815	32.379	33.271	0.21168	0.027098	-0.00032702	NaN	57.149	41	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	927660	+		43154	23197	28826	28839							0.007330940002475472
PRFHGDLR	8	Unmodified	_PRFHGDLR_					0	0	0			REV__nc|ENSG00000197558|A2VEC9|SSPOP	REV__nc|ENSG00000197558|A2VEC9|SSPOP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.2690124511719	2	499.26995	996.525347	0.15001	7.4893E-05	-1.4038	-0.0007009	-1.2538	-0.000626	499.2690919376944	20.295	0.55097	19.836	19.549	20.1	-0.4591					34	11	4	0	0	0	0.90089	1	626	626		39.253	2.0937	1	254710	+		43155	30139	28827	28840	48995	48995					0.026945449429945256
PRFIKQVLKD	10	Unmodified	_PRFIKQVLKD_					0	0	0		L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|11|1|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|11|1|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|11|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.9244079589844	3	415.255557	1242.74484	0.90079	0.00037406	-1.676	-0.00069598	-0.77525	-0.00032193	415.254704866643	28.48	0.38757	28.306	28.122	28.51	-0.17336					11	9	2	0	0	0	0.37624	1	1752	1752		30.569	22.162	1	23234			43156	14670	28828	28841	48996	48996					0.13317931110827885
PRFKELKFV	9	Unmodified	_PRFKELKFV_					0	0	0			REV__ENSG00000004700|ENST00000444129|RECQL	REV__ENSG00000004700|ENST00000444129|RECQL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3535766601562	2	582.350409	1162.68626	3.1803	0.0018521	1.9439	0.001132	5.1242	0.0029841	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.78983	2	11462	11462;11525		27.882	0	1	77008000	+		43157	16060	28829	28842	48997;48998	48997					0.1114287453635825
PRFKELKFV	9	Unmodified	_PRFKELKFV_					0	0	0			REV__ENSG00000004700|ENST00000444129|RECQL	REV__ENSG00000004700|ENST00000444129|RECQL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3536987304688	2	582.350409	1162.68626	2.7406	0.001596	3.0386	0.0017695	5.7792	0.0033655	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.78983	1	12561	12561		27.882	2.3082	1	7862700	+		43158	16060	28829	28842	48999	48999					0.1114287453635825
PRFLDPQAL	9	Unmodified	_PRFLDPQAL_					0	0	0		ENSG00000126705|ENST00000673934|AHDC1	ENSG00000126705|ENST00000673934|AHDC1	ENSG00000126705|ENST00000673934|AHDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.793212890625	2	528.795466	1055.57638	0.035781	1.8921E-05	-4.0065	-0.0021186	-3.9707	-0.0020997	528.79326255139	36.295	1.3449	36.276	35.876	37.221	-0.018673					75	29	5	0	0	0	0.35373	1	2326	2326		60.972	2.19	1	1122800			43159	3460	28830	28843	49000	49000					0.050814491971550524
PRFMALVTIA	10	Unmodified	_PRFMALVTIA_					0	0	0		ENST00000319540.8_1_4:83552326-83552455:-|nuORF	ENST00000319540.8_1_4:83552326-83552455:-|nuORF	ENST00000319540.8_1_4:83552326-83552455:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.8262939453125	2	559.823169	1117.63179	1.1597	0.00064923	2.2823	0.0012777	3.442	0.0019269	559.8242610505523	18.455	0.32746	17.978	17.843	18.171	-0.47694					18	6	4	0	0	0	0.86589	1	404	404		29.15	2.4566	1	137750			43160	10018	28831	28844	49001	49001					0.07767539393307743
PRFNKLAE	8	Unmodified	_PRFNKLAE_					0	0	0		ENST00000503958.1_1_5:24487774-24493064:-|nuORF;ENSG00000040731|ENST00000264463|CDH10	ENST00000503958.1_1_5:24487774-24493064:-|nuORF	ENST00000503958.1_1_5:24487774-24493064:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7762756347656	2	487.774534	973.534515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72	1	72	71.5	72.5	0								0	0	0	0.29452	1	6443	6443		33.516	1.5607	1				43161	929	28832	28845	49002	49002					0.04668893508653582
PRFTPPLAK	9	Unmodified	_PRFTPPLAK_					0	0	0			REV__ENST00000489181.5_1_3:9944520-9950978:+|nuORF	REV__ENST00000489181.5_1_3:9944520-9950978:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8085327148438	2	513.808377	1025.6022	-0.15906	-8.1728E-05	1.3381	0.00068753	1.179	0.0006058	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.7932	1	3733	3733		25.574	1.3713	1	1484700	+		43162	27616	28833	28846	49003	49003					0.09042343439477918
PRGAQLQSA	9	Unmodified	_PRGAQLQSA_					0	0	0		CON__ENSEMBL:ENSBTAP00000023055	CON__ENSEMBL:ENSBTAP00000023055	CON__ENSEMBL:ENSBTAP00000023055	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.25299072265625	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.78536	1	7926	7926		29.15	6.1071	1	1449300		+	43163	567	28834	28847	49004	49004					0.027191324691898444
PRGGPLAAA	9	Unmodified	_PRGGPLAAA_					0	0	0			REV__ENST00000400532.5_1_21:27012030-27056198:+|nuORF	REV__ENST00000400532.5_1_21:27012030-27056198:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.2340087890625	2	405.235045	808.455536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.056	1	23.144	22.644	23.644	0.088013								0	0	0	0.31828	1	725	725		24.203	5.8783	1		+		43164	26250	28835	28848	49005	49005					0.043646662743526576
PRGHHKPRALV	11	Unmodified	_PRGHHKPRALV_					0	0	0		ENST00000542075.5_1_17:79259090-79259336:-|nuORF	ENST00000542075.5_1_17:79259090-79259336:-|nuORF	ENST00000542075.5_1_17:79259090-79259336:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3760375976562	2	634.378355	1266.74216	1.3188	0.00083664	-2.8412	-0.0018024	-1.5224	-0.00096577	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.69995	2	13013	13013;13165		31.53	4.4825	1	12917000			43165	13522	28836	28849	49006;49007	49006					0.11945520496556128
PRGKAEVR	8	Unmodified	_PRGKAEVR_					0	0	0			REV__ENSG00000196415|ENST00000234347|PRTN3	REV__ENSG00000196415|ENST00000234347|PRTN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7723083496094	2	456.772326	911.530098	0.66367	0.00030315	-0.37052	-0.00016924	0.29315	0.0001339	456.77188114676403	89.921	1.592	90.073	89.44	91.032	0.1519					92	37	4	0	0	0	0.89043	1	8980	8980		35.618	1.4457	1	1022900	+		43166	23125	28837	28850	49008	49008					0.07079429085740685
PRGLFVGDLV	10	Unmodified	_PRGLFVGDLV_					0	0	0		ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.6660766601562	2	536.811116	1071.60768	-0.44288	-0.00023775	-0.55629	-0.00029862	-0.99917	-0.00053637	536.8107437772287	75.482	0.52533	76.047	75.781	76.306	0.56458					18	12	2	0	0	0	0.37624	1	8557	8557		32.812	7.2384	1	151320			43167	799	28838	28851	49009	49009					0.07474022231258459
PRGLIDIQREL	11	Unmodified	_PRGLIDIQREL_					0	0	0			REV__nc|ENSG00000198315|Q15776-2|ZKSCAN8	REV__nc|ENSG00000198315|Q15776-2|ZKSCAN8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2565612792969	3	437.257738	1308.75138	1.2902	0.00056413	-2.0789	-0.000909	-0.7887	-0.00034487	437.2568346681843	98.713	2.2467	99.074	98.073	100.32	0.36136					142	55	3	0	0	0	0.71207	1	11930	11930		29.551	0.97402	1	470200	+		43168	23316	28839	28852	49010	49010					0.10935824271564343
PRGNYIES	8	Unmodified	_PRGNYIES_					0	0	0		ENSG00000164659|ENST00000450689|ELAPOR2;nc|ENSG00000164659|A8MWY0-3|ELAPOR2	ENSG00000164659|ENST00000450689|ELAPOR2	ENSG00000164659|ENST00000450689|ELAPOR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.75506591796875	2	468.232699	934.450845	-1.3259	-0.00062084	-1.222	-0.00057218	-2.5479	-0.001193	468.2320248471972	57.47	0.74332	57.864	57.574	58.317	0.39407					30	18	2	0	0	0	0.4196	1	6005	6005		25.45	11.675	1	523360			43169	5986	28840	28853	49011	49011					-0.019002626590577165
PRGNYIES	8	Unmodified	_PRGNYIES_					0	0	0		ENSG00000164659|ENST00000450689|ELAPOR2;nc|ENSG00000164659|A8MWY0-3|ELAPOR2	ENSG00000164659|ENST00000450689|ELAPOR2	ENSG00000164659|ENST00000450689|ELAPOR2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	468.232699	934.450845	0.11902	5.5728E-05	-2.7282	-0.0012774	-2.6091	-0.0012217	468.231295867916	57.191	0.74992	57.746	57.519	58.269	0.55512	-0.058938	-0.00071218	NaN	7.1934	33	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	491050			43170	5986	28840	28853							-0.019002626590577165
PRGPLGIPG	9	Unmodified	_PRGPLGIPG_					0	0	0			REV__nc|ENSG00000060718|P12107-2|COL11A1	REV__nc|ENSG00000060718|P12107-2|COL11A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.25750732421875	2	432.25852	862.502486	0.40609	0.00017553	-1.8282	-0.00079027	-1.4221	-0.00061473	432.2575947247643	68.412	1.5069	68.797	68.224	69.731	0.38482					60	35	2	0	0	0	0.77546	1	7551	7551		31.955	0	1	399210	+		43171	15406	28841	28854	49012	49012					0.06573525825513116
PRGPPDCP	8	Unmodified	_PRGPPDCP_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.77410888671875	2	419.697438	837.380322	0.2005	8.415E-05	-4.2064	-0.0017654	-4.0059	-0.0016813	419.6956556682408	42.528	2.7184	42.498	41.625	44.343	-0.029461					78	65	2	0	0	0	0.4196	1	3381	3381		42.474	23.114	1	117630	+		43172	20437;29946	28842	28855	49013	49013					-0.0448725924837845
PRGPRPRRR	9	Unmodified	_PRGPRPRRR_					0	0	0			REV__ENST00000317357.9_1_6:107955847-107956252:+|nuORF	REV__ENST00000317357.9_1_6:107955847-107956252:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3565673828125	2	574.355214	1146.69588	1.1072	0.0006359	0.05724	3.2876E-05	1.1644	0.00066877	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.78536	1	10765	10765		29.15	0	1	708140	+		43173	24964	28843	28856	49014	49014					0.12839500385121028
PRGRAAPT	8	Unmodified	_PRGRAAPT_					0	0	0			REV__ENST00000498830.5_1_20:62608437-62611350:-|nuORF	REV__ENST00000498830.5_1_20:62608437-62611350:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.23651123046875	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.90983	1	6845	6845		42.396	1.8235	1	1341700	+		43174	27387	28844	28857	49015	49015					0.04243184505889985
PRGRGIDPA	9	Unmodified	_PRGRGIDPA_					0	0	0		ENSG00000153303|ENST00000283309|FRMD1	ENSG00000153303|ENST00000283309|FRMD1	ENSG00000153303|ENST00000283309|FRMD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7611999511719	2	469.761958	937.509363	-1.0651	-0.00050035	-0.060913	-2.8615E-05	-1.126	-0.00052896	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.7932	1	1937	1937		23.042	2.0956	1	219920			43175	5231	28845	28858	49016	49016					0.03810838706078812
PRGRPPPAR	9	Unmodified	_PRGRPPPAR_					0	0	0		ENST00000551727.5_1_12:104531302-104531635:-|nuORF	ENST00000551727.5_1_12:104531302-104531635:-|nuORF	ENST00000551727.5_1_12:104531302-104531635:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	502.8142395019531	2	502.299042	1002.58353	-1.6075	-0.00080744	2.1067	0.0010582	0.49922	0.00025076	502.8012498517184	97.003	0.217	97.205	97.052	97.269	0.20207					5	4	2	0	0	0	0.20789	1	9938	9938		21.96	10.449	1	60140			43176	13672	28846	28859	49017	49017					0.08234226588263027
PRGRPRKLTAM	11	Unmodified	_PRGRPRKLTAM_					0	0	0		ENSG00000173894|ENST00000310942|CBX2;nc|ENSG00000173894|Q14781-2|CBX2	ENSG00000173894|ENST00000310942|CBX2	ENSG00000173894|ENST00000310942|CBX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.882568359375	2	641.879873	1281.74519	2.2004	0.0014124	1.7915	0.0011499	3.9918	0.0025623	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.70737	1	10681	10681		30.318	0	1	3624200			43177	6895	28847	28860	49018	49018					0.11559027559042079
PRGRPRRLLC	10	Unmodified	_PRGRPRRLLC_					0	0	0		ENST00000233154.8_1_2:106509690-106509834:+|nuORF	ENST00000233154.8_1_2:106509690-106509834:+|nuORF	ENST00000233154.8_1_2:106509690-106509834:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.29205322265625	3	408.580381	1222.71931	-0.044217	-1.8066E-05	-2.6751	-0.001093	-2.7193	-0.0011111	408.5790543531321	20.623	0.67144	19.993	19.581	20.253	-0.62961					30	14	3	0	0	0	0.37624	1	626	626		16.007	0	1	111650			43178	9223	28848	28861	49019	49019					0.11686178107424894
PRGRRIGDKL	10	Unmodified	_PRGRRIGDKL_					0	0	0			REV__nc|ENSG00000165244|Q7RTV3-2|ZNF367	REV__nc|ENSG00000165244|Q7RTV3-2|ZNF367	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	584.3565063476562	2	584.357088	1166.69962	-0.42255	-0.00024692	-0.86654	-0.00050637	-1.2891	-0.00075329	584.3564465061169	92.917	2.7194	92.917	91.633	94.352	0					122	62	2	0	0	0	0.8486	1	9136	9136		18.262	0	1	314890	+		43179	21167	28849	28862	49020	49020					0.122941253683166
PRGRVVGA	8	Unmodified	_PRGRVVGA_					0	0	0			REV__ENST00000603791.1_1_6:3751774-3752740:+|nuORF	REV__ENST00000603791.1_1_6:3751774-3752740:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.25079345703125	2	406.248486	810.48242	3.144	0.0012772	-2.6463	-0.0010751	0.49768	0.00020218	406.2473237922933	114.03	1.1173	114.05	113.12	114.24	0.020027					74	50	2	0	0	0	0.86288	1	13679	13679		26.796	0	1	65995	+		43180	29348	28850	28863	49021	49021					0.06959774885558545
PRGSLFDR	8	Unmodified	_PRGSLFDR_					0	0	0			REV__ENSG00000142449|ENST00000600128|FBN3	REV__ENSG00000142449|ENST00000600128|FBN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2538146972656	2	474.256508	946.498464	-0.47841	-0.00022689	-3.5255	-0.001672	-4.0039	-0.0018989	474.2547109107997	22.499	1.1216	21.888	21.633	22.755	-0.6107					48	27	2	0	0	0	0.87922	1	935	935		31.955	2.8053	1	176200	+		43181	19740	28851	28864	49022	49022					0.023074363318073665
PRGVIAAVV	9	Unmodified	_PRGVIAAVV_					0	0	0			REV__ENST00000295404.9_1_19:50200719-50213852:+|nuORF	REV__ENST00000295404.9_1_19:50200719-50213852:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.2823486328125	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.704	1	40.658	40.158	41.158	-0.045467								0	0	0	0.29299	1	2598	2598		33.516	13.034	1		+		43182	24699	28852	28865	49023	49023					0.10438385376642145
PRGVMRLAG	9	Unmodified	_PRGVMRLAG_					0	0	0			REV__ENST00000483133.1_7:100608813-100609843:+|nuORF	REV__ENST00000483133.1_7:100608813-100609843:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.7772521972656	2	478.776554	955.538554	-0.43892	-0.00021015	-0.80822	-0.00038696	-1.2471	-0.0005971	478.7762158918014	34.023	0.56537	33.967	33.697	34.262	-0.056385					21	12	2	0	0	0	0.7932	1	2114	2114		24.203	1.1603	1	44748	+		43183	27481	28853	28866	49024	49024					0.05900659730718871
PRGVVPFQ	8	Unmodified	_PRGVVPFQ_					0	0	0		nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1;ENSG00000105939|ENST00000242351|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-5|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1	nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1	nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.25830078125	2	450.25852	898.502486	-0.62857	-0.00028302	0.25064	0.00011285	-0.37793	-0.00017017	450.25857361491086	26.004	1.9799	25.747	25.175	27.155	-0.2572					122	44	6	0	0	0	0.84634	1	1396	1396		60.294	0	1	7125800			43184	2266	28854	28867	49025	49025					0.04917525825510438
PRHEFPELA	9	Unmodified	_PRHEFPELA_					0	0	0		ENST00000590856.1_1_17:73826107-73826739:-|nuORF;ENSG00000092929|ENST00000207549|UNC13D;nc|ENSG00000092929|Q70J99-3|UNC13D	ENST00000590856.1_1_17:73826107-73826739:-|nuORF	ENST00000590856.1_1_17:73826107-73826739:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.7393798828125	2	548.282723	1094.55089	-0.16256	-8.913E-05	0.14007	7.6799E-05	-0.02249	-1.2331E-05	548.284397406302	75.168	1.3503	75.733	75.413	76.764	0.56458					77	32	4	0	0	0	0.20789	1	8564	8564		44.117	8.9648	1	522200			43185	1706	28855	28868	49026	49026					0.00739974674752375
PRHPGVLV	8	Unmodified	_PRHPGVLV_					0	0	0		ENST00000479818.5_1_22:50713453-50713714:-|nuORF	ENST00000479818.5_1_22:50713453-50713714:-|nuORF	ENST00000479818.5_1_22:50713453-50713714:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.7657165527344	2	437.766512	873.518471	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.178	1	25.178	24.678	25.678	0								0	0	0	0.29498	1	900	900		26.796	6.3143	1				43186	12420	28856	28869	49027	49027					0.0766523206242482
PRHRRLWQE	9	Unmodified	_PRHRRLWQE_					0	0	0			REV__ENSG00000077498|ENST00000263321|TYR	REV__ENSG00000077498|ENST00000263321|TYR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	639.350830078125	2	639.352337	1276.69012	-0.036307	-2.3213E-05	-2.0176	-0.0012899	-2.0539	-0.0013132	639.350747632087	99.16	0.99697	99.16	98.89	99.887	0					33	23	2	0	0	0	0.64922	1	10010	10010		44.117	7.67	1	335620	+		43187	16749	28857	28870	49028	49028					0.06284357082790848
PRIARRDYDLL	11	Unmodified	_PRIARRDYDLL_					0	0	0		nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.2665100097656	3	463.265004	1386.77318	0.31847	0.00014754	2.6142	0.0012111	2.9326	0.0013586	463.2661538167076	56.845	0.76048	57.4	57.006	57.766	0.55512					38	17	3	0	0	0	0.74405	1	5913	5913		23.378	1.5975	1	878060			43188	2362	28858	28871	49029	49029					0.09526629020137989
PRIASNAGSIA	11	Unmodified	_PRIASNAGSIA_					0	0	0		ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.7928466796875	2	528.793455	1055.57236	-1.5408	-0.00081478	1.4151	0.0007483	-0.12571	-6.6474E-05	528.7940819687291	36.232	0.98741	36.232	35.879	36.867	0					58	23	4	0	0	0	0.48313	1	2070	2070		53.089	0.15226	1	756220			43189	3407	28859	28872	49030	49030					0.04679359703482078
PRIASNAGSIA	11	Unmodified	_PRIASNAGSIA_					0	0	0		ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.7928466796875	2	528.793455	1055.57236	0.035781	1.8921E-05	-0.2028	-0.00010724	-0.16702	-8.8318E-05	528.79326255139	36.295	1.3449	36.276	35.876	37.221	-0.018673					75	29	5	0	0	0	0.22372	3	2314	2290;2302;2314		78.264	10.77	1	1122800			43190	3407	28859	28872	49031;49032;49033	49033					0.04679359703482078
PRIASNAGSIA	11	Unmodified	_PRIASNAGSIA_					0	0	0		ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.7929077148438	2	528.793455	1055.57236	-0.29217	-0.0001545	0.15811	8.361E-05	-0.13405	-7.0887E-05	528.7934265407783	36.279	1.2558	36.223	35.879	37.135	-0.055904					72	27	4	0	0	0	0.3308	3	2394	2384;2394;2418		66.962	8.732	1	1444600			43191	3407	28859	28872	49034;49035;49036	49035					0.04679359703482078
PRIASNAGSIA	11	Unmodified	_PRIASNAGSIA_					0	0	0		ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.79296875	2	528.793455	1055.57236	-0.70681	-0.00037376	0.44833	0.00023708	-0.25848	-0.00013668	528.7935602407883	36.229	1.4862	36.239	35.797	37.283	0.0092773					80	32	4	0	0	0	0.43522	2	2346	2334;2346		56.632	5.4396	1	1332400			43192	3407	28859	28872	49037;49038	49038					0.04679359703482078
PRIASNAGSIA	11	Unmodified	_PRIASNAGSIA_					0	0	0		ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.7916259765625	2	528.793455	1055.57236	-0.18975	-0.00010034	0.25859	0.00013674	0.068838	3.6401E-05	528.7934615759206	36.24	0.83895	36.271	35.927	36.765	0.031132					57	23	4	0	0	0	0.61369	2	1959	1959;1968		42.864	2.3561	1	593790			43193	3407	28859	28872	49039;49040	49039					0.04679359703482078
PRIASNAGSIA	11	Unmodified	_PRIASNAGSIA_					0	0	0		ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.79248046875	2	528.793455	1055.57236	0.24716	0.0001307	-0.27032	-0.00014294	-0.023164	-1.2249E-05	528.7931728625157	35.978	0.73717	36.081	35.817	36.554	0.10306					58	23	4	0	0	0	0.57736	2	1937	1937;1946		46.457	2.2242	1	664310			43194	3407	28859	28872	49041;49042	49041					0.04679359703482078
PRIASNAGSIA	11	Unmodified	_PRIASNAGSIA_					0	0	0		ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.7932739257812	2	528.793455	1055.57236	0.32349	0.00017106	-0.32045	-0.00016945	0.0030454	1.6104E-06	528.7931534014222	36.129	0.71097	36.069	35.752	36.463	-0.060337					57	20	4	0	0	0	0.37012	1	1970	1970		61.691	2.9093	1	620290			43195	3407	28859	28872	49043	49043					0.04679359703482078
PRIASNAGSIA	11	Unmodified	_PRIASNAGSIA_					0	0	0		ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.793212890625	2	528.793455	1055.57236	1.0935	0.00057822	-1.1708	-0.00061909	-0.077289	-4.087E-05	528.7928379036528	35.778	2.2829	36.025	35.438	37.721	0.24769					158	56	6	0	0	0	0.33597	1	2762	2762		65.157	8.4362	1	16698000			43196	3407	28859	28872	49044	49044					0.04679359703482078
PRIASNAGSIA	11	Unmodified	_PRIASNAGSIA_					0	0	0		ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	ENST00000584583.1_1_17:37006387-37006753:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7931518554688	2	528.793455	1055.57236	1.5726	0.00083159	-1.7971	-0.00095027	-0.22444	-0.00011868	528.7924826805944	35.727	2.3531	36.168	35.922	38.275	0.44043					117	58	5	0	0	0	0.13035	4	2786	2774;2786;2798;2812		85.862	19.371	1	18377000			43197	3407	28859	28872	49045;49046;49047;49048	49046					0.04679359703482078
PRIATTLFNK	10	Unmodified	_PRIATTLFNK_					0	0	0			REV__ENSG00000147383|ENST00000370274|NSDHL	REV__ENSG00000147383|ENST00000370274|NSDHL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.8404541015625	2	580.842948	1159.67134	-0.70798	-0.00041123	-3.4414	-0.0019989	-4.1494	-0.0024101	580.8407660860938	69.805	0.83526	69.876	69.594	70.43	0.071045					106	41	3	0	0	0	0.86272	1	6318	6318		24.519	0.31644	1	12587000	+		43198	20067	28860	28873	49049	49049					0.09789382668373037
PRIDLIVFVV	10	Unmodified	_PRIDLIVFVV_					0	0	0		nc|ENSG00000100162|Q9NSP4-4|CENPM;nc|ENSG00000100162|Q9NSP4-2|CENPM;ENST00000396437.3_1_22:42341142-42343146:-|nuORF;ENSG00000100162|ENST00000215980|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	nc|ENSG00000100162|Q9NSP4-4|CENPM	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.86767578125	2	585.865892	1169.71723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.014	1	24.501	24.001	25.001	-0.51365								0	0	0	0.45132	1	1262	1262		32.812	6.1195	1				43199	1804	28861	28874	49050	49050					0.1391602785060968
PRIGFHVII	9	Unmodified	_PRIGFHVII_					0	0	0			REV__nc|ENSG00000113360|Q9NRR4-2|DROSHA	REV__nc|ENSG00000113360|Q9NRR4-2|DROSHA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3250732421875	2	526.324194	1050.63383	-0.18304	-9.6338E-05	0.74345	0.0003913	0.56041	0.00029496	526.324520166758	61.08	1.3849	61.181	59.837	61.222	0.10082					92	55	2	0	0	0	0.7932	1	5289	5289		26.796	7.4361	1	275350	+		43200	17991	28862	28875	49051	49051					0.110543361934333
PRIGFHVII	9	Unmodified	_PRIGFHVII_					0	0	0			REV__nc|ENSG00000113360|Q9NRR4-2|DROSHA	REV__nc|ENSG00000113360|Q9NRR4-2|DROSHA	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3215942382812	2	526.324194	1050.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.441	1	69.507	69.007	70.007	0.065506								0	0	0	0.31472	1	6264	6264		25.45	0	1		+		43201	17991	28862	28875	49052	49052					0.110543361934333
PRIITGPAPV	10	Unmodified	_PRIITGPAPV_					0	0	0		nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-9|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;ENSG00000112531|ENST00000361752|QKI	nc|ENSG00000112531|Q96PU8-5|QKI	nc|ENSG00000112531|Q96PU8-5|QKI	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.81390380859375	2	510.813659	1019.61277	-0.053582	-2.7371E-05	1.033	0.00052767	0.97942	0.0005003	510.81277149178777	80.826	1.111	81.247	80.721	81.832	0.4215					79	26	4	0	0	0	0.86587	1	9304	9304		29.17	1.2878	1	1491100			43202	2667	28863	28876	49053	49053					0.10374326093904074
PRIKQVRLS	9	Unmodified	_PRIKQVRLS_					0	0	0			REV__ENST00000488537.1_1_1:145440216-145440639:+|nuORF	REV__ENST00000488537.1_1_1:145440216-145440639:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.357421875	2	548.851107	1095.68766	0.34245	0.00018795	2.7258	0.0014961	3.0683	0.001684	548.8530255725624	44.438	0.40458	44.487	44.336	44.74	0.048996					11	9	2	0	0	0	0.78983	1	3137	3137		27.882	1.1893	1	48269	+		43203	23960	28864	28877	49054	49054					0.14364508625135386
PRILPRNQGN	10	Unmodified	_PRILPRNQGN_					0	0	0			REV__nc|ENSG00000102145|P15976-3|GATA1	REV__nc|ENSG00000102145|P15976-3|GATA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.83349609375	2	582.833446	1163.65234	-1.3452	-0.00078404	-0.0031547	-1.8387E-06	-1.3484	-0.00078588	582.8334573704366	94.259	3.5437	94.457	93.113	96.657	0.19827					191	84	3	0	0	0	0.71042	1	9493	9493		44.117	10.195	1	775360	+		43204	17328	28865	28878	49055	49055					0.07705846097337599
PRINLTWHKN	10	Unmodified	_PRINLTWHKN_					0	0	0		ENSG00000115590|ENST00000332549|IL1R2;ENST00000482658.1_1_2:102626076-102632522:+|nuORF;ENST00000464994.5_1_2:102608436-102626289:+|nuORF;nc|ENSG00000115590|P27930-2|IL1R2	ENSG00000115590|ENST00000332549|IL1R2	ENSG00000115590|ENST00000332549|IL1R2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3030090332031	3	426.907039	1277.69929	-0.10534	-4.4969E-05	1.8235	0.00077848	1.7182	0.00073351	426.90712148967793	59.201	0.23842	59.754	59.536	59.775	0.55323					7	5	2	0	0	0	0.37624	1	6240	6240		26.063	0	1	82133			43205	2857	28866	28879	49056	49056					0.0715470564844054
PRIPPFSN	8	Unmodified	_PRIPPFSN_					0	0	0			REV__nc|ENSG00000184838|Q569H4-2|PRR16	REV__nc|ENSG00000184838|Q569H4-2|PRR16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2534484863281	2	464.255977	926.497401	-0.76573	-0.00035549	-3.3334	-0.0015476	-4.0992	-0.0019031	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.89494	1	9681	9681		37.159	2.9866	1	1046600	+		43206	22704	28867	28880	49057	49057					0.031212219629082938
PRIPYTELSH	10	Unmodified	_PRIPYTELSH_					0	0	0		nc|ENSG00000108773|Q92830-2|KAT2A;ENSG00000108773|ENST00000225916|KAT2A	nc|ENSG00000108773|Q92830-2|KAT2A	nc|ENSG00000108773|Q92830-2|KAT2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	607.2997436523438	2	606.822212	1211.62987	-0.027332	-1.6586E-05	-3.9545	-0.0023997	-3.9818	-0.0024163	606.8181976791537	58.811	0.20599	59.364	59.215	59.421	0.55323					5	4	2	0	0	0	0.37624	1	6169	6169		27.882	4.3595	1	94396			43207	2429	28868	28881	49058	49058					0.032522019090492904
PRIRPRGRPR	10	Unmodified	_PRIRPRGRPR_					0	0	0			REV__nc|ENSG00000126464|Q9ULL5-2|PRR12	REV__nc|ENSG00000126464|Q9ULL5-2|PRR12	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.7699279785156	3	420.933923	1259.77994	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.291	1	74.377	73.877	74.877	0.085907								0	0	0	0.45132	1	6837	6837		25.126	0.89417	1		+		43208	18702	28869	28882	49059	49059					0.1604403148203346
PRIRSATH	8	Unmodified	_PRIRSATH_					0	0	0		ENST00000211379.9_1_6:31619532-31620470:-|nuORF;ENST00000375964.10_1_6:31619532-31620470:-|nuORF	ENST00000211379.9_1_6:31619532-31620470:-|nuORF	ENST00000211379.9_1_6:31619532-31620470:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.5666198730469	2	469.26995	936.525347	-0.86025	-0.00040369	2.0551	0.0009644	1.1949	0.00056071	469.27027893496177	53.87	0.20994	54.455	54.291	54.501	0.58474					6	4	2	0	0	0	0.4196	1	5469	5469		12.959	0	1	170050			43209	9111	28870	28883	49060	49060					0.0545454494298383
PRISLHFL	8	Unmodified	_PRISLHFL_					0	0	0		ENST00000586659.5_1_19:11275055-11275190:-|nuORF	ENST00000586659.5_1_19:11275055-11275190:-|nuORF	ENST00000586659.5_1_19:11275055-11275190:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957763671875	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.89043	1	3435	3435		35.618	7.364	1	3201400			43210	14173	28871	28884	49061	49061					0.08446074267976655
PRISLHFL	8	Unmodified	_PRISLHFL_					0	0	0		ENST00000586659.5_1_19:11275055-11275190:-|nuORF	ENST00000586659.5_1_19:11275055-11275190:-|nuORF	ENST00000586659.5_1_19:11275055-11275190:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7950134277344	2	491.795269	981.575986	-1.0095	-0.00049646	1.2929	0.00063585	0.28344	0.00013939	491.79577391563464	44.834	1.3425	45.297	44.375	45.717	0.46313					102	32	4	0	0	0	0.86288	1	4095	4095		26.796	3.7536	1	7709100			43211	14173	28871	28884	49062	49062					0.08446074267976655
PRKAPVKES	9	Unmodified	_PRKAPVKES_					0	0	0		nc|ENSG00000229809|P0C7X2-5|ZNF688;ENSG00000229809|ENST00000223459|ZNF688	nc|ENSG00000229809|P0C7X2-5|ZNF688	nc|ENSG00000229809|P0C7X2-5|ZNF688	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3016662597656	2	506.300916	1010.58728	-0.77581	-0.00039279	0.85671	0.00043375	0.080901	4.096E-05	506.3012917024536	96.808	1.2917	96.808	96.218	97.509	0					69	29	3	0	0	0	0.78536	1	9686	9686		29.15	3.5755	1	235960			43212	8728	28872	28885	49063	49063					0.0824085157147465
PRKHITATNTP	11	Unmodified	_PRKHITATNTP_					0	0	0		chr13:37564560-37567782|15|12.73|0.12|6.72|-|2|POSTN,None|1	chr13:37564560-37567782|15|12.73|0.12|6.72|-|2|POSTN,None|1	chr13:37564560-37567782|15|12.73|0.12|6.72|-|2|POSTN,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.34521484375	2	618.346386	1234.67822	-0.32375	-0.00020019	-0.40651	-0.00025136	-0.73026	-0.00045155	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.68532	1	10337	10337		33.922	0	1	926440			43213	154	28873	28886	49064	49064					0.07026695548938733
PRKHRAGALG	10	Unmodified	_PRKHRAGALG_					0	0	0			REV__ENST00000426615.3_1_2:177042826-177043225:+|nuORF	REV__ENST00000426615.3_1_2:177042826-177043225:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8174438476562	2	531.817599	1061.62064	-0.053058	-2.8217E-05	-1.4964	-0.00079579	-1.5494	-0.000824	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.86763	1	8336	8336		26.693	4.733	1	1422300	+		43214	26546	28874	28887	49065	49065					0.09229898134026371
PRKHRRALPI	10	Unmodified	_PRKHRRALPI_					0	0	0		nc|ENSG00000180071|Q8IVF6-2|ANKRD18A	nc|ENSG00000180071|Q8IVF6-2|ANKRD18A	nc|ENSG00000180071|Q8IVF6-2|ANKRD18A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	622.3492431640625	2	622.396548	1242.77854	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.693	1	22.741	22.241	23.241	0.048553								0	0	0	0.45132	1	689	689		21.96	4.5949	1				43215	15129	28875	28888	49066	49066					0.1668639739327773
PRKIAPHG	8	Unmodified	_PRKIAPHG_					0	0	0		ENSG00000119973|ENST00000239032|PRLHR	ENSG00000119973|ENST00000239032|PRLHR	ENSG00000119973|ENST00000239032|PRLHR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2627868652344	2	438.264136	874.51372	0.23628	0.00010355	-2.5171	-0.0011032	-2.2808	-0.00099961	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.86288	1	3394	3394		26.796	5.8492	1	5350400			43216	3106	28876	28889	49067	49067					0.07144347919643224
PRKKGGSSP	9	Unmodified	_PRKKGGSSP_					0	0	0			REV__chr6:33418086-33418202|26|29.69|0.0|21.5|-|2|CUTA,None|1	REV__chr6:33418086-33418202|26|29.69|0.0|21.5|-|2|CUTA,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2633361816406	2	457.264333	912.514114	-0.11988	-5.4815E-05	0.13028	5.9574E-05	0.010409	4.7595E-06	457.26428644836	79.385	2.7838	79.935	78.442	81.226	0.54945					170	65	4	0	0	0	0.67345	1	9149	9149		42.396	0	1	1064700	+		43217	15881	28877	28890	49068	49068					0.05435722848869773
PRKKTTSS	8	Unmodified	_PRKKTTSS_					0	0	0		nc|ENSG00000144824|Q86SQ0-2|PHLDB2;nc|ENSG00000144824|Q86SQ0-3|PHLDB2;ENSG00000144824|ENST00000431670|PHLDB2	nc|ENSG00000144824|Q86SQ0-2|PHLDB2	nc|ENSG00000144824|Q86SQ0-2|PHLDB2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.7619934082031	2	452.764166	903.513779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.736	1	36.675	36.175	37.175	-0.060333								0	0	0	0.30884	1	2043	2043		13.775	0	1				43218	4734	28878	28891	49069	49069					0.05816303128983691
PRKLGPTE	8	Unmodified	_PRKLGPTE_					0	0	0		ENSG00000128626|ENST00000308018|MRPS12	ENSG00000128626|ENST00000308018|MRPS12	ENSG00000128626|ENST00000308018|MRPS12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.76300048828125	2	449.261259	896.507966	-1.3059	-0.00058669	-0.46348	-0.00020822	-1.7694	-0.00079491	449.2608709500843	73.271	0.46545	73.4	73.031	73.496	0.1292					30	18	2	0	0	0	0.87479	1	6741	6741		30.504	5.0535	1	216530			43219	3555	28879	28892	49070	49070					0.05557204617332445
PRKLGVNG	8	Unmodified	_PRKLGVNG_					0	0	0			REV__ENST00000381577.3_1_9:5467950-5468001:+|nuORF	REV__ENST00000381577.3_1_9:5467950-5468001:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.75494384765625	2	420.756144	839.497735	-2.163	-0.00091008	-0.04622	-1.9447E-05	-2.2092	-0.00092953	420.7559301673431	20.73	1.3575	20.73	19.75	21.107	0					81	64	2	0	0	0	0.82419	1	513	513		13.775	1.5685	1	64367	+		43220	25969	28880	28893	49071	49071					0.07156641682752252
PRKLIPITII	10	Unmodified	_PRKLIPITII_					0	0	0		ENSG00000154175|ENST00000471714|ABI3BP;nc|ENSG00000154175|Q7Z7G0|ABI3BP;ENST00000475896.5_1_3:100583650-100712249:-|nuORF	ENSG00000154175|ENST00000471714|ABI3BP	ENSG00000154175|ENST00000471714|ABI3BP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3536987304688	2	582.397359	1162.78016	0.72272	0.00042091	4.3156	0.0025134	5.0384	0.0029343	582.39906911477	103.38	0.46864	103.56	103.43	103.9	0.18298					16	11	3	0	0	0	0.37624	1	10956	10956		16.473	3.0191	1	273100			43221	5260	28881	28894	49072	49072					0.2052859363866446
PRKLIPITII	10	Unmodified	_PRKLIPITII_					0	0	0		ENSG00000154175|ENST00000471714|ABI3BP;nc|ENSG00000154175|Q7Z7G0|ABI3BP;ENST00000475896.5_1_3:100583650-100712249:-|nuORF	ENSG00000154175|ENST00000471714|ABI3BP	ENSG00000154175|ENST00000471714|ABI3BP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	582.397359	1162.78016	-1.3468	-0.00078434	4.6522	0.0027094	3.3055	0.0019251	582.3985177154836	103.67	0.55742	103.79	103.65	104.21	0.11494	0.11184	0.00024495	NaN	16.473	14	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	131480			43222	5260	28881	28894							0.2052859363866446
PRKLKRIL	8	Unmodified	_PRKLKRIL_					0	0	0		ENSG00000142185|ENST00000397928|TRPM2;nc|ENSG00000142185|O94759-2|TRPM2	ENSG00000142185|ENST00000397928|TRPM2	ENSG00000142185|ENST00000397928|TRPM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.3615112304688	2	512.361111	1022.70767	-0.36988	-0.00018951	0.50559	0.00025904	0.13571	6.9531E-05	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.81724	1	7220	7220		14.664	1.7049	1	304520			43223	4547	28882	28895	49073	49073					0.1972230435574147
PRKMSVIVP	9	Unmodified	_PRKMSVIVP_					0	0	0		nc|ENSG00000166402|P50607-2|TUB;ENSG00000166402|ENST00000299506|TUB	nc|ENSG00000166402|P50607-2|TUB	nc|ENSG00000166402|P50607-2|TUB	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8085327148438	2	513.810062	1025.60557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.43	1	51.345	50.845	51.845	-0.084538								0	0	0	0.32758	1	4100	4100		20.947	2.6225	1				43224	15071	28883	28896	49074	49074					0.09379270221802471
PRKNKVAS	8	Unmodified	_PRKNKVAS_					0	0	0			REV__ENST00000380237.5_1_11:5291144-5291255:-|nuORF	REV__ENST00000380237.5_1_11:5291144-5291255:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2740173339844	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.85277	1	10238	10238		25.45	0.93098	1	51820000	+		43225	25943	28884	28897	49075	49075					0.08152313228515595
PRKPRARPA	9	Unmodified	_PRKPRARPA_					0	0	0		ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8272705078125	2	524.827966	1047.64138	-1.5341	-0.00080515	0.41773	0.00021924	-1.1164	-0.00058592	524.8280472672277	102.21	1.1307	102.34	101.89	103.02	0.13569					72	27	3	0	0	0	0.7932	1	10697	10697		23.042	1.0826	1	626370			43226	9674	28885	28898	49076	49076					0.1194648851369493
PRKPRGAS	8	Unmodified	_PRKPRGAS_					0	0	0			REV__ENSG00000013364|ENST00000357402|MVP	REV__ENSG00000013364|ENST00000357402|MVP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.75982666015625	2	434.759218	867.503883	-0.16642	-7.2351E-05	0.12333	5.3619E-05	-0.043085	-1.8732E-05	434.75945112998903	87.697	3.829	87.765	85.858	89.687	0.067711					171	89	4	0	0	0	0.84341	2	8898	8874;8898		30.504	1.3541	1	1344400	+		43227	16194	28886	28899	49077;49078	49078					0.06483159914284897
PRKRASGPGD	10	Unmodified	_PRKRASGPGD_					0	0	0		ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	520.9819946289062	2	520.783422	1039.55229	-0.60854	-0.00031692	1.9496	0.0010153	1.3411	0.00069841	520.7843763683227	108.32	0.45761	108.32	108.2	108.66	0					32	23	2	0	0	0	0.37624	1	11272	11272		10.265	0	1	1351900			43228	1946	28887	28900	49079	49079					0.03409608763536198
PRKRLLKYGD	10	Unmodified	_PRKRLLKYGD_					0	0	0			REV__ENST00000368654.7_1_10:129905347-129905398:-|nuORF	REV__ENST00000368654.7_1_10:129905347-129905398:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	623.3768310546875	2	623.374946	1244.73534	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.95	1	107.99	107.49	108.49	0.036125								0	0	0	0.45132	1	11544	11544		3.1592	0	1		+		43229	25600	28888	28901	49080	49080					0.12276162825310166
PRKRTPTVTR	10	Unmodified	_PRKRTPTVTR_					0	0	0			REV__nc|ENSG00000181896|Q8IZC7-2|ZNF101	REV__nc|ENSG00000181896|Q8IZC7-2|ZNF101	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.369384765625	2	606.370195	1210.72584	2.2948	0.0013915	-3.4602	-0.0020982	-1.1655	-0.00070671	606.3679986963975	94.415	3.2479	94.356	93.249	96.497	-0.059212					198	76	3	0	0	0	0.86272	1	9974	9974		24.519	0.99649	1	800340	+		43230	22486	28889	28902	49081	49081					0.12890394539772387
PRKSVLPG	8	Unmodified	_PRKSVLPG_					0	0	0		ENST00000482172.5_1_13:21205203-21245170:+|nuORF	ENST00000482172.5_1_13:21205203-21245170:+|nuORF	ENST00000482172.5_1_13:21205203-21245170:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	427.3028564453125	2	427.266345	852.518136	-0.18196	-7.7745E-05	-1.8535	-0.00079194	-2.0355	-0.00086968	427.26401979565696	68.543	0.080261	68.565	68.517	68.597	0.021599					5	3	2	0	0	0	0.4196	1	6472	6472		38.806	23.164	1	24583			43231	12481	28890	28903	49082	49082					0.08597812342577527
PRKSVLPG	8	Unmodified	_PRKSVLPG_					0	0	0		ENST00000482172.5_1_13:21205203-21245170:+|nuORF	ENST00000482172.5_1_13:21205203-21245170:+|nuORF	ENST00000482172.5_1_13:21205203-21245170:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	427.30267333984375	2	427.266345	852.518136	1.3606	0.00058134	-3.2056	-0.0013696	-1.845	-0.0007883	427.2653421554886	68.666	0.19047	68.699	68.623	68.814	0.033005					13	6	3	0	0	0	0.4196	1	6568	6568		55.504	14.932	1	47378			43232	12481	28890	28903	49083	49083					0.08597812342577527
PRKVGLIL	8	Unmodified	_PRKVGLIL_					0	0	0			REV__ENSG00000008311|ENST00000417368|AASS	REV__ENSG00000008311|ENST00000417368|AASS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.3064880371094	2	448.308013	894.601472	0.076818	3.4438E-05	-2.764	-0.0012391	-2.6872	-0.0012047	448.3066406433988	20.825	2.1311	20.366	19.266	21.397	-0.4591					84	48	2	0	0	0	0.82464	1	735	735		21.702	0	1	263520	+		43233	16135	28891	28904	49084	49084					0.14995548790420798
PRLAIQLLKR	10	Unmodified	_PRLAIQLLKR_					0	0	0		ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3663940429688	2	604.403507	1206.79246	3.2051	0.0019372	-1.2726	-0.00076916	1.9325	0.001168	604.402147193201	105.08	0.29552	105.04	104.89	105.19	-0.04039					8	6	2	0	0	0	0.37624	1	11582	11582		9.7057	0.52274	1	67641			43234	1721;14802	28892	28905	49085	49085					0.1973363010167759
PRLALKAWP	9	Unmodified	_PRLALKAWP_					0	0	0		ENST00000399541.6_1_17:6888782-6915571:-|nuORF	ENST00000399541.6_1_17:6888782-6915571:-|nuORF	ENST00000399541.6_1_17:6888782-6915571:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3248291015625	2	526.324194	1050.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.019	1	56.993	56.493	57.493	-0.026108								0	0	0	0.32159	1	4822	4822		23.042	0	1				43235	11206	28893	28906	49086	49086					0.11054336193410563
PRLAPAGQ	8	Unmodified	_PRLAPAGQ_					0	0	0			REV__ENST00000474865.6_1_X:1561047-1561140:-|nuORF	REV__ENST00000474865.6_1_X:1561047-1561140:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.2322082519531	2	405.235045	808.455536	0.29501	0.00011955	1.3351	0.00054103	1.6301	0.00066058	405.23534202620266	25.686	0.52575	25.71	25.314	25.84	0.024021					31	26	2	0	0	0	0.90465	1	925	925		40.573	8.6178	1	32340	+		43236	27312	28894	28907	49087	49087					0.04364666274375395
PRLARAAPVPI	11	Unmodified	_PRLARAAPVPI_					0	0	0		ENST00000451024.4_2_10:126138300-126138735:-|nuORF	ENST00000451024.4_2_10:126138300-126138735:-|nuORF	ENST00000451024.4_2_10:126138300-126138735:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8660278320312	2	580.866757	1159.71896	-0.68716	-0.00039915	-0.31119	-0.00018076	-0.99836	-0.00057991	580.8664418786329	78.579	1.3049	79.142	78.537	79.842	0.56332					71	30	3	0	0	0	0.73893	1	9005	9005		24.519	1.4767	1	1961100			43237	11897	28895	28908	49088	49088					0.14549081659242802
PRLCLFLVP	9	Unmodified	_PRLCLFLVP_					0	0	0		ENST00000265734.8_1_7:92242717-92242960:-|nuORF	ENST00000265734.8_1_7:92242717-92242960:-|nuORF	ENST00000265734.8_1_7:92242717-92242960:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.79296875	2	529.31498	1056.61541	-0.49479	-0.0002619	-4.1363	-0.0021894	-4.6311	-0.0024513	529.3116039679377	35.164	1.6148	35.17	34.727	36.342	0.0063934					53	37	3	0	0	0	0.20789	1	2322	2322		24.203	4.8428	1	50948			43238	9512	28896	28909	49089	49089					0.0893645822718554
PRLDLPRRP	9	Unmodified	_PRLDLPRRP_					0	0	0		ENST00000477886.5_1_7:102004521-102004752:+|nuORF	ENST00000477886.5_1_7:102004521-102004752:+|nuORF	ENST00000477886.5_1_7:102004521-102004752:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.340576171875	2	560.340907	1118.66726	0.75729	0.00042434	-2	-0.0011207	-1.2427	-0.00069633	560.3396777082794	89.478	2.7427	89.63	87.684	90.427	0.1519					160	64	4	0	0	0	0.7932	1	8937	8937		21.96	0	1	678500			43239	12365	28897	28910	49090	49090					0.11267337965318802
PRLEEIRIW	9	Unmodified	_PRLEEIRIW_					0	0	0		nc|ENSG00000160323|Q76LX8|ADAMTS13;nc|ENSG00000160323|Q76LX8-3|ADAMTS13;ENSG00000160323|ENST00000355699|ADAMTS13;nc|ENSG00000160323|Q76LX8-4|ADAMTS13	nc|ENSG00000160323|Q76LX8|ADAMTS13	nc|ENSG00000160323|Q76LX8|ADAMTS13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.9226989746094	3	404.568024	1210.68224	-0.12525	-5.0672E-05	-0.10166	-4.113E-05	-0.22691	-9.1802E-05	404.5682479213315	20.859	0.42398	20.231	19.985	20.409	-0.62835					10	9	2	0	0	0	0.20789	1	694	694		12.812	0	1	28335			43240	15039	28898	28911	49091	49091					0.08532785042643809
PRLGLHYTN	9	Unmodified	_PRLGLHYTN_					0	0	0			REV__ENSG00000213339|ENST00000250237|QTRT1	REV__ENSG00000213339|ENST00000250237|QTRT1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.8137817382812	2	535.790715	1069.56688	-0.58248	-0.00031209	-4.4866	-0.0024039	-5.0691	-0.002716	535.7878640061188	99.562	0.41287	99.562	99.222	99.635	0					12	9	2	0	0	0	0.20789	1	10052	10052		19.997	3.5236	1	44361	+		43241	23613	28899	28912	49092	49092					0.03487680911666757
PRLGLVIHCV	10	Unmodified	_PRLGLVIHCV_					0	0	0			REV__ENSG00000170832|ENST00000300896|USP32	REV__ENSG00000170832|ENST00000300896|USP32	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.830078125	2	553.828786	1105.64302	0.37109	0.00020552	2.0145	0.0011157	2.3856	0.0013212	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.86452	1	10503	10503		30.504	0.18592	1	1786500	+		43242	21690	28900	28913	49093	49093					0.09442361487435846
PRLGPVARPDN	11	Unmodified	_PRLGPVARPDN_					0	0	0			REV__ENST00000367161.7_1_1:205156906-205180643:-|nuORF	REV__ENST00000367161.7_1_1:205156906-205180643:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3324584960938	2	596.333279	1190.652	-0.57959	-0.00034563	-0.049534	-2.9539E-05	-0.62912	-0.00037517	596.3331084008277	96.35	3.5496	96.416	95.306	98.855	0.06591					255	82	4	0	0	0	0.59499	1	10115	10115		45.022	4.244	1	1242500	+		43243	25556	28901	28914	49094	49094					0.06430426377482945
PRLGTRGP	8	Unmodified	_PRLGTRGP_					0	0	0		ENST00000261211.7_1_12:96728621-96793984:-|nuORF	ENST00000261211.7_1_12:96728621-96793984:-|nuORF	ENST00000261211.7_1_12:96728621-96793984:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	427.3028564453125	2	427.253769	852.492984	1.3659	0.00058357	-0.37779	-0.00016141	0.98807	0.00042216	427.25535563887735	68.601	0.13549	68.634	68.537	68.673	0.032997					6	5	2	0	0	0	0.4196	1	6549	6549		60.294	10.269	1	39593			43244	9397	28902	28915	49095	49095					0.0608375753998871
PRLGTRGP	8	Unmodified	_PRLGTRGP_					0	0	0		ENST00000261211.7_1_12:96728621-96793984:-|nuORF	ENST00000261211.7_1_12:96728621-96793984:-|nuORF	ENST00000261211.7_1_12:96728621-96793984:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3025207519531	2	427.253769	852.492984	0.36926	0.00015777	0.27884	0.00011914	0.6481	0.0002769	427.2538956528243	66.069	0.11873	66.455	66.392	66.511	0.38581					4	2	2	0	0	0	0.4196	1	7200	7200		50.025	14.824	1	68989			43245	9397	28902	28915	49096	49096					0.0608375753998871
PRLGTRGP	8	Unmodified	_PRLGTRGP_					0	0	0		ENST00000261211.7_1_12:96728621-96793984:-|nuORF	ENST00000261211.7_1_12:96728621-96793984:-|nuORF	ENST00000261211.7_1_12:96728621-96793984:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3030090332031	2	427.253769	852.492984	0.21161	9.041E-05	0.023285	9.9486E-06	0.23489	0.00010036	427.2532359213569	66.034	0.37244	66.586	66.268	66.641	0.5526					12	9	2	0	0	0	0.4196	1	7195	7195		40.573	13.777	1	115970			43246	9397	28902	28915	49097	49097					0.0608375753998871
PRLHFCLVL	9	Unmodified	_PRLHFCLVL_					0	0	0		ENSG00000163501|ENST00000295731|IHH	ENSG00000163501|ENST00000295731|IHH	ENSG00000163501|ENST00000295731|IHH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3197631835938	2	549.318054	1096.62156	-1.4544	-0.00079891	0.68804	0.00037795	-0.76633	-0.00042096	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.7932	1	10600	10600		25.45	3.7644	1	2310400			43247	5808	28903	28916	49098	49098					0.07710976458724872
PRLHIRKRILF	11	Unmodified	_PRLHIRKRILF_					0	0	0			REV__ENSG00000139112|ENST00000266458|GABARAPL1	REV__ENSG00000139112|ENST00000266458|GABARAPL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.64617919921875	3	483.649012	1447.92521	-1.6265	-0.00078667	-3.8284	-0.0018516	-5.4549	-0.0026383	483.64706776464374	46.522	1.6286	46.522	46.06	47.688	0					186	51	5	0	0	0	0.78391	4	3481	3481;3512;3523;3583		14.694	2.1536	1	4540800	+		43248	19514	28904	28917	49099;49100;49101;49102	49099					0.21916074558362197
PRLHIRKRILF	11	Unmodified	_PRLHIRKRILF_					0	0	0			REV__ENSG00000139112|ENST00000266458|GABARAPL1	REV__ENSG00000139112|ENST00000266458|GABARAPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.64630126953125	3	483.649012	1447.92521	-1.6199	-0.00078345	-3.8702	-0.0018718	-5.4901	-0.0026553	483.64701567342865	46.699	1.7316	46.695	46.155	47.886	-0.0041618					198	50	6	0	0	0	0.78683	5	3763	3753;3763;3784;3853;3883		14.086	2.6274	1	5137200	+		43249	19514	28904	28917	49103;49104;49105;49106;49107	49104					0.21916074558362197
PRLHIRKRILF	11	Unmodified	_PRLHIRKRILF_					0	0	0			REV__ENSG00000139112|ENST00000266458|GABARAPL1	REV__ENSG00000139112|ENST00000266458|GABARAPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.646484375	3	483.649012	1447.92521	-1.5595	-0.00075426	-3.8143	-0.0018448	-5.3738	-0.002599	483.6470312482302	48.336	2.6056	48.333	47.817	50.423	-0.002449					214	62	5	0	0	0	0.78391	1	3989	3989		14.694	5.4819	1	2393300	+		43250	19514	28904	28917	49108	49108					0.21916074558362197
PRLHIRKRILF	11	Unmodified	_PRLHIRKRILF_					0	0	0			REV__ENSG00000139112|ENST00000266458|GABARAPL1	REV__ENSG00000139112|ENST00000266458|GABARAPL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.6463623046875	3	483.649012	1447.92521	-0.83511	-0.0004039	-4.2466	-0.0020538	-5.0817	-0.0024577	483.6468148790766	48.119	2.7855	48.141	47.459	50.244	0.02227					217	75	4	0	0	0	0.78683	1	3644	3644		14.086	1.1285	1	1942300	+		43251	19514	28904	28917	49109	49109					0.21916074558362197
PRLHVKFISGR	11	Unmodified	_PRLHVKFISGR_					0	0	0			REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677917480469	3	437.266568	1308.77787	-0.071192	-3.113E-05	3.0883	0.0013504	3.0171	0.0013193	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.76892	1	4447	4447		17.833	1.9125	1	3270700	+		43252	28125	28905	28918	49110	49110					0.13583557953529635
PRLHVKFISGR	11	Unmodified	_PRLHVKFISGR_					0	0	0			REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2678527832031	3	437.266568	1308.77787	1.1681	0.00051075	1.7871	0.00078144	2.9551	0.0012922	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.74771	1	4520	4520		22.562	4.7284	1	4130900	+		43253	28125	28905	28918	49111	49111					0.13583557953529635
PRLHVKFISGR	11	Unmodified	_PRLHVKFISGR_					0	0	0			REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26800537109375	3	437.266568	1308.77787	0.29718	0.00012995	2.7258	0.0011919	3.023	0.0013219	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.72892	1	4132	4132		26.75	4.9693	1	4533800	+		43254	28125	28905	28918	49112	49112					0.13583557953529635
PRLHVKFISGR	11	Unmodified	_PRLHVKFISGR_					0	0	0			REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.267333984375	3	437.266568	1308.77787	0.78044	0.00034126	1.9459	0.0008509	2.7264	0.0011922	437.26733211231357	49.246	1.5472	50.15	49.725	51.272	0.90424					125	37	5	0	0	0	0.74771	1	4796	4796		22.562	2.9347	1	5667400	+		43255	28125	28905	28918	49113	49113					0.13583557953529635
PRLIAEPG	8	Unmodified	_PRLIAEPG_					0	0	0		nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L;ENSG00000121210|ENST00000409959|TMEM131L	nc|ENSG00000121210|A2VDJ0-2|TMEM131L	nc|ENSG00000121210|A2VDJ0-2|TMEM131L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.302734375	2	426.750527	851.486502	-0.027341	-1.1668E-05	-1.172	-0.00050013	-1.1993	-0.0005118	426.7498681626677	68.732	1.2528	69.278	68.574	69.827	0.54693					58	29	4	0	0	0	0.4196	1	7520	7520		47.916	0	1	442670			43256	3169	28906	28919	49114	49114					0.054818195886127796
PRLKETPKIK	10	Unmodified	_PRLKETPKIK_					0	0	0		nc|ENSG00000131233|P57773-2|GJA9	nc|ENSG00000131233|P57773-2|GJA9	nc|ENSG00000131233|P57773-2|GJA9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.92974853515625	3	403.92744	1208.76049	2.3249	0.0009391	3.1739	0.001282	5.4989	0.0022211	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.86151	1	3912	3912		15.333	1.8252	1	2948200			43257	14914	28907	28920	49115	49115					0.16446217627867554
PRLKVSRA	8	Unmodified	_PRLKVSRA_					0	0	0			REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.800048828125	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.79929	1	3331	3331		18.324	0	1	1570500	+		43258	18407	28908	28921	49116	49116					0.1163659249950797
PRLLARPGAGP	11	Unmodified	_PRLLARPGAGP_					0	0	0		ENST00000396081.5_1_7:35734290-35734692:-|nuORF	ENST00000396081.5_1_7:35734290-35734692:-|nuORF	ENST00000396081.5_1_7:35734290-35734692:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8320922851562	2	552.835457	1103.65636	-0.74602	-0.00041243	-1.6881	-0.00093326	-2.4342	-0.0013457	552.8344221073519	82.073	1.2669	82.073	81.549	82.816	0					61	32	2	0	0	0	0.72918	1	7678	7678		26.693	1.2427	1	174970			43259	11109	28909	28922	49117	49117					0.10867935591022615
PRLLHRTR	8	Unmodified	_PRLLHRTR_					0	0	0			REV__ENST00000415560.1_1_X:26766465-26767074:+|nuORF	REV__ENST00000415560.1_1_X:26766465-26767074:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.826904296875	2	524.827966	1047.64138	0.8139	0.00042716	-2.8534	-0.0014975	-2.0395	-0.0010704	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.80308	1	10644	10644		16.473	1.809	1	27719000	+		43260	19878	28910	28923	49118	49118					0.11946488513672193
PRLLLRLH	8	Unmodified	_PRLLLRLH_					0	0	0			REV__ENST00000487330.1_1_9:74975472-74979818:-|nuORF	REV__ENST00000487330.1_1_9:74975472-74979818:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.3115234375	2	509.337636	1016.66072	0.67384	0.00034321	-1.9579	-0.00099724	-1.2841	-0.00065403	509.3365752785511	72.44	0.58102	72.991	72.647	73.228	0.55009					16	13	2	0	0	0	0.4196	1	8129	8129		8.2313	0	1	83439	+		43261	25850	28911	28924	49119	49119					0.15305444804585022
PRLLPCGG	8	Unmodified	_PRLLPCGG_					0	0	0			REV__ENST00000053867.7_1_17:42430120-42430237:+|nuORF	REV__ENST00000053867.7_1_17:42430120-42430237:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.728271484375	2	406.725998	811.437443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.594	1	75.64	75.14	76.14	0.046448								0	0	0	0.29199	1	7359	7359		29.842	6.7991	1		+		43262	24067	28912	28925	49120	49120					0.024182080280183982
PRLLRWRRTEW	11	Unmodified	_PRLLRWRRTEW_					0	0	0			REV__ENST00000389279.7_1_8:22462563-22463297:+|nuORF	REV__ENST00000389279.7_1_8:22462563-22463297:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.6348876953125	3	523.635542	1567.8848	-0.4869	-0.00025496	-1.2387	-0.00064862	-1.7256	-0.00090358	523.6348544015394	45.351	1.4658	45.32	44.929	46.395	-0.031067					110	33	5	0	0	0	0.79476	2	3640	3640;3700		12.433	0.97822	1	2727200	+		43263	25993	28913	28926	49121;49122	49121					0.12357108167907427
PRLLTHFL	8	Unmodified	_PRLLTHFL_					0	0	0		ENST00000357066.7_1_19:2072329-2072617:-|nuORF	ENST00000357066.7_1_19:2072329-2072617:-|nuORF	ENST00000357066.7_1_19:2072329-2072617:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8033447265625	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.87064	1	4555	4555		29.15	0.89528	1	2702800			43264	10379	28914	28927	49123	49123					0.09366360785031702
PRLLTRLTK	9	Unmodified	_PRLLTRLTK_					0	0	0			REV__nc|ENSG00000163576|Q8N7U6-3|EFHB	REV__nc|ENSG00000163576|Q8N7U6-3|EFHB	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3593139648438	2	549.361308	1096.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.665	1	44.714	44.214	45.214	0.048996								0	0	0	0.31437	1	3166	3166		25.574	1.3713	1		+		43265	20938	28915	28928	49124	49124					0.16357679284919868
PRLMVLRQPR	10	Unmodified	_PRLMVLRQPR_					0	0	0		nc|ENSG00000009307|O75534-2|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5925598144531	3	422.592286	1264.75503	2.1003	0.00088759	-1.174	-0.00049614	0.9263	0.00039145	422.59169327867005	49.208	2.7795	49.208	47.99	50.769	0.00016785					227	65	5	0	0	0	0.85834	1	4228	4228		22.58	4.0486	1	2361900			43266	752	28916	28929	49125	49125					0.133242155643984
PRLMVLRQPR	10	Unmodified	_PRLMVLRQPR_					0	0	0		nc|ENSG00000009307|O75534-2|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5924072265625	3	422.592286	1264.75503	-1.8117	-0.0007656	3.4662	0.0014648	1.6545	0.00069918	422.59357864263933	54.504	2.542	54.559	53.757	56.299	0.055611					235	90	4	0	0	0	0.84816	1	4481	4481		17.468	2.1305	1	1177200			43267	752	28916	28929	49126	49126					0.133242155643984
PRLNFFQYKYR	11	Unmodified	_PRLNFFQYKYR_					0	0	0			REV__nc|ENSG00000060709|O15034-2|RIMBP2	REV__nc|ENSG00000060709|O15034-2|RIMBP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.2778625488281	3	511.277132	1530.80957	-1.6097	-0.00082298	-2.0569	-0.0010516	-3.6665	-0.0018746	511.27590022322084	37.797	1.076	37.797	37.483	38.559	0					62	26	4	0	0	0	0.74771	1	2351	2351		22.562	9.6041	1	366100	+		43268	16451	28917	28930	49127	49127					0.06539505916839516
PRLNGAKTG	9	Unmodified	_PRLNGAKTG_					0	0	0		ENSG00000136932|ENST00000375119|TRMO	ENSG00000136932|ENST00000375119|TRMO	ENSG00000136932|ENST00000375119|TRMO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2633972167969	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.76764	1	8225	8225		34.173	0	1	4597500			43269	4160	28918	28931	49128	49128					0.05435722848858404
PRLNNLHKK	9	Unmodified	_PRLNNLHKK_					0	0	0			REV__ENST00000589647.5_2_17:67498778-67513009:+|nuORF	REV__ENST00000589647.5_2_17:67498778-67513009:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3410034179688	2	560.340907	1118.66726	1.4125	0.0007915	-2.3969	-0.0013431	-0.98437	-0.00055158	560.3394435206833	89.174	0.87046	89.625	89.242	90.113	0.45058					49	20	3	0	0	0	0.7932	1	10529	10529		26.693	5.746	1	577310	+		43270	29159	28919	28932	49129	49129					0.11267337965318802
PRLPGPPPAS	10	Unmodified	_PRLPGPPPAS_					0	0	0		ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000197136|Q9H6A9-3|PCNX3;ENST00000439247.2_1_11:65394334-65404446:+|nuORF	ENSG00000197136|ENST00000355703|PCNX3	ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7798156738281	2	494.782359	987.550165	-0.074951	-3.7084E-05	-3.8536	-0.0019067	-3.9285	-0.0019438	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.86763	1	8563	8563		26.693	3.6504	1	651380			43271	8138	28920	28933	49130	49130					0.0558918002569726
PRLPGWGG	8	Unmodified	_PRLPGWGG_					0	0	0			REV__ENST00000205061.9_2_16:74484931-74485462:-|nuORF	REV__ENST00000205061.9_2_16:74484931-74485462:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.22747802734375	2	420.229762	838.444972	-1.7925	-0.00075327	-2.6269	-0.0011039	-4.4195	-0.0018572	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.89457	1	7556	7556		37.028	2.8559	1	831720	+		43272	24103	28921	28934	49131	49131					0.019286836199512436
PRLPGWGG	8	Unmodified	_PRLPGWGG_					0	0	0			REV__ENST00000205061.9_2_16:74484931-74485462:-|nuORF	REV__ENST00000205061.9_2_16:74484931-74485462:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2275085449219	2	420.229762	838.444972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.123	1	77.214	76.714	77.714	0.091438								0	0	0	0.29694	1	7203	7203		37.028	1.8278	1		+		43273	24103	28921	28934	49132	49132					0.019286836199512436
PRLPLIVLLSS	11	Unmodified	_PRLPLIVLLSS_					0	0	0			REV__ENST00000252934.9_1_22:46067795-46085660:+|nuORF	REV__ENST00000252934.9_1_22:46067795-46085660:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5748291015625	3	403.263941	1206.76999	0.90094	0.00036331	0.99349	0.00040064	1.8944	0.00076396	403.26426872954454	81.557	0.20709	81.983	81.795	82.002	0.42646					5	4	2	0	0	0	0.17385	1	9391	9391		5.1424	0	1	50723	+		43274	24299	28922	28935	49133	49133					0.1748798591340801
PRLPPHPAM	9	Unmodified	_PRLPPHPAM_					0	0	0		ENSG00000197978|ENST00000618348|GOLGA6L9;ENSG00000278662|ENST00000610657|GOLGA6L10	ENSG00000197978|ENST00000618348|GOLGA6L9	ENSG00000197978|ENST00000618348|GOLGA6L9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2801513671875	2	508.278929	1014.54331	1.4316	0.00072764	1.1148	0.00056664	2.5464	0.0012943	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.5393	1	9305	9305		50.025	18.39	1	1903500			43275	8221	28923	28936	49134	49134					0.036615438734884265
PRLPRPQAL	9	Unmodified	_PRLPRPQAL_					0	0	0			REV__ENST00000543115.5_1_12:7055773-7060837:+|nuORF	REV__ENST00000543115.5_1_12:7055773-7060837:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.26904296875	2	524.324725	1046.6349	0.27206	0.00014265	-2.7651	-0.0014498	-2.493	-0.0013072	524.3228929656774	30.498	0.78591	30.502	30.054	30.84	0.0037212					44	17	3	0	0	0	0.20789	1	2039	2039		37.159	4.3467	1	378110	+		43276	28504	28924	28937	49135	49135					0.11344550562307631
PRLPWVLIAF	10	Unmodified	_PRLPWVLIAF_					0	0	0		nc|ENSG00000066827|Q9P243-3|ZFAT	nc|ENSG00000066827|Q9P243-3|ZFAT	nc|ENSG00000066827|Q9P243-3|ZFAT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.1877746582031	3	404.581493	1210.72265	1.5389	0.00062262	-4.385	-0.0017741	-2.8461	-0.0011515	404.57960585094725	33.264	1.5194	33.434	32.59	34.109	0.16971					63	35	2	0	0	0	0.37624	1	2306	2306		22.58	6.5729	1	152800			43277	14767	28925	28938	49136	49136					0.12571751433074496
PRLRARCGRLR	11	Unmodified	_PRLRARCGRLR_					0	0	0			REV__ENST00000303212.2_1_19:5824142-5828303:+|nuORF	REV__ENST00000303212.2_1_19:5824142-5828303:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.94305419921875	3	451.942201	1352.80477	-0.67633	-0.00030566	2.881	0.001302	2.2046	0.00099636	451.94335598806316	53.501	2.9355	53.476	51.367	54.303	-0.024754					205	72	4	0	0	0	0.74771	1	4757	4757		22.562	8.4756	1	765750	+		43278	24795	28926	28939	49137	49137					0.1424834329307032
PRLRHFKLAQ	10	Unmodified	_PRLRHFKLAQ_					0	0	0		ENSG00000165757|ENST00000375377|JCAD	ENSG00000165757|ENST00000375377|JCAD	ENSG00000165757|ENST00000375377|JCAD	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5912780761719	3	422.591163	1264.75166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.86	1	54.811	54.311	55.311	-0.049271								0	0	0	0.45132	1	4565	4565		20.837	1.7336	1				43279	6121	28927	28940	49138	49138					0.12987288782096584
PRLRLLQMD	9	Unmodified	_PRLRLLQMD_					0	0	0		ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.3321533203125	2	571.32915	1140.64375	2.9117	0.0016635	0.22817	0.00013036	3.1399	0.0017939	571.3292778918316	102.35	2.3075	102.31	101.49	103.8	-0.047005					131	55	4	0	0	0	0.7932	1	11227	11227		23.042	0.46283	1	2404800			43280	7074	28928	28941	49139	49139					0.07905156136484948
PRLRPLDQR	9	Unmodified	_PRLRPLDQR_					0	0	0			REV__ENST00000307845.7_1_2:10567007-10567424:+|nuORF	REV__ENST00000307845.7_1_2:10567007-10567424:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8428955078125	2	575.843813	1149.67307	-0.49921	-0.00028747	-0.94267	-0.00054283	-1.4419	-0.0008303	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.78536	1	8769	8769		29.15	1.0681	1	1518700	+		43281	24854	28929	28942	49140	49140					0.10422436476960684
PRLRQCVG	8	Unmodified	_PRLRQCVG_					0	0	0			REV__ENST00000373313.2_1_20:39317299-39317872:-|nuORF	REV__ENST00000373313.2_1_20:39317299-39317872:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.7604675292969	2	464.760904	927.507254	-0.34562	-0.00016063	-0.01509	-7.0133E-06	-0.36071	-0.00016765	464.7606525267958	78.466	0.88814	78.877	78.551	79.439	0.4106					42	20	3	0	0	0	0.87922	1	8968	8968		31.955	0	1	737300	+		43282	25757	28930	28943	49141	49141					0.04060086696631515
PRLRSPSA	8	Unmodified	_PRLRSPSA_					0	0	0		chr5:69844913-70420249|13|11.62|0.38|4.93|+|0|TE_info:LTR12E,LTR12E_dup46,ERV1,LTR,donor,+,69844126,69844913|None,GTF2H2B|1	chr5:69844913-70420249|13|11.62|0.38|4.93|+|0|TE_info:LTR12E,LTR12E_dup46,ERV1,LTR,donor,+,69844126,69844913|None,GTF2H2B|1	chr5:69844913-70420249|13|11.62|0.38|4.93|+|0|TE_info:LTR12E,LTR12E_dup46,ERV1,LTR,donor,+,69844126,69844913|None,GTF2H2B|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.240966796875	2	442.259051	882.503549	-0.15412	-6.8161E-05	0.44445	0.00019656	0.29033	0.0001284	442.25915051653834	83.36	1.2469	83.427	82.913	84.16	0.066719					46	28	2	0	0	0	0.4196	1	8226	8226		37.159	5.2042	1	93579			43283	455	28931	28944	49142	49142					0.057597401944121884
PRLSPKLSRPT	11	Unmodified	_PRLSPKLSRPT_					0	0	0			REV__ENST00000305978.6_1_20:34541962-34542070:-|nuORF	REV__ENST00000305978.6_1_20:34541962-34542070:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.92236328125	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.77421	1	11646	11646		15.337	0	1	19495000	+		43284	24826	28932	28945	49143	49143					0.1305614547973164
PRLSPKLSRPT	11	Unmodified	_PRLSPKLSRPT_					0	0	0			REV__ENST00000305978.6_1_20:34541962-34542070:-|nuORF	REV__ENST00000305978.6_1_20:34541962-34542070:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3798217773438	2	626.380229	1250.7459	2.0982	0.0013142	-3.0036	-0.0018814	-0.90548	-0.00056717	626.3782628803294	105.51	2.7267	105.67	104.93	107.65	0.15583					187	94	2	0	0	0	0.59831	1	12848	12848		28.081	0	1	2939000	+		43285	24826	28932	28945	49144	49144					0.1305614547973164
PRLTEGRR	8	Unmodified	_PRLTEGRR_					0	0	0		nc|ENSG00000168779|O60902-3|SHOX2	nc|ENSG00000168779|O60902-3|SHOX2	nc|ENSG00000168779|O60902-3|SHOX2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2859802246094	2	492.788507	983.562461	-0.60407	-0.00029768	-0.26185	-0.00012903	-0.86592	-0.00042671	492.7899165625341	110.67	0.64524	110.79	110.58	111.22	0.11659					34	26	2	0	0	0	0.4196	1	11930	11930		24.203	0	1	98093			43286	15083	28933	28946	49145	49145					0.07002216488751856
PRLTEGRR	8	Unmodified	_PRLTEGRR_					0	0	0		nc|ENSG00000168779|O60902-3|SHOX2	nc|ENSG00000168779|O60902-3|SHOX2	nc|ENSG00000168779|O60902-3|SHOX2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	492.788507	983.562461	2.8471	0.001403	-4.8592	-0.0023946	-2.0121	-0.00099156	492.7881547654001	111.07	0.073021	111.05	110.98	111.06	-0.026314	0.12223	-0.00062746	NaN	24.203	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15720			43287	15083	28933	28946							0.07002216488751856
PRLTLVSP	8	Unmodified	_PRLTLVSP_					0	0	0			REV__ENST00000575335.5_2_17:1394394-1394487:-|nuORF	REV__ENST00000575335.5_2_17:1394394-1394487:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78717041015625	2	441.774003	881.533452	-0.068867	-3.0424E-05	-2.0452	-0.0009035	-2.114	-0.00093393	441.77234144600965	41.379	0.12514	41.386	41.297	41.423	0.0065727					4	2	2	0	0	0	0.4196	1	3041	3041		23.042	4.7181	1	29338	+		43288	28984	28934	28947	49146	49146					0.08794679139759864
PRLTVTTSPRS	11	Unmodified	_PRLTVTTSPRS_					0	0	0			REV__ENST00000523845.5_1_7:44259663-44270619:-|nuORF	REV__ENST00000523845.5_1_7:44259663-44270619:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.56463623046875	3	405.566571	1213.67788	-1.5858	-0.00064316	-3.0129	-0.0012219	-4.5987	-0.0018651	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.72374	1	5254	5254		27.644	9.8108	1	181560	+		43289	28148	28935	28948	49147	49147					0.0795927582908007
PRLVAGLL	8	Unmodified	_PRLVAGLL_					0	0	0		ENST00000589453.5_1_19:9875628-9879277:-|nuORF	ENST00000589453.5_1_19:9875628-9879277:-|nuORF	ENST00000589453.5_1_19:9875628-9879277:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.77667236328125	2	419.779088	837.543623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.258	1	55.321	54.821	55.821	0.063725								0	0	0	0.30674	1	4616	4616		15.636	0	1				43290	14238	28936	28949	49148	49148					0.11835286864993577
PRLVGPCA	8	Unmodified	_PRLVGPCA_					0	0	0			REV__ENST00000330539.1_1_8:37593798-37594005:-|nuORF	REV__ENST00000330539.1_1_8:37593798-37594005:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.72900390625	2	406.725998	811.437443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.274	1	76.322	75.822	76.822	0.047981								0	0	0	0.30674	1	7450	7450		15.636	0.97212	1		+		43291	25110	28937	28950	49149	49149					0.024182080280070295
PRLVRAAA	8	Unmodified	_PRLVRAAA_					0	0	0		nc|ENSG00000177731|Q13045-3|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENSG00000177731|ENST00000327031|FLII;nc|ENSG00000177731|Q13045-2|FLII	nc|ENSG00000177731|Q13045-3|FLII	nc|ENSG00000177731|Q13045-3|FLII	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	427.3028869628906	2	427.271961	852.52937	-1.7231	-0.00073624	3.9732	0.0016976	2.2501	0.00096139	427.27342244767834	68.448	0.12241	68.584	68.503	68.626	0.13522					6	4	2	0	0	0	0.4196	1	6144	6144		26.796	6.3143	1	32583			43292	7162	28938	28951	49150	49150					0.09720634436689579
PRLVRAAA	8	Unmodified	_PRLVRAAA_					0	0	0		nc|ENSG00000177731|Q13045-3|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENSG00000177731|ENST00000327031|FLII;nc|ENSG00000177731|Q13045-2|FLII	nc|ENSG00000177731|Q13045-3|FLII	nc|ENSG00000177731|Q13045-3|FLII	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	427.271961	852.52937	-0.18204	-7.7779E-05	7.8921	0.0033721	7.7101	0.0032943	427.2760043383022	68.448	0.10608	68.469	68.39	68.497	0.021599	-0.057202	0.0022897	NaN	26.796	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36531			43293	7162	28938	28951							0.09720634436689579
PRLVSLLLSAR	11	Unmodified	_PRLVSLLLSAR_					0	0	0			REV__ENSG00000123989|ENST00000243776|CHPF	REV__ENSG00000123989|ENST00000243776|CHPF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	409.2920837402344	3	408.931073	1223.77139	-1.9388	-0.00079282	3.5203	0.0014396	1.5816	0.00064675	409.2671026334892	19.223	0.099495	19.267	19.213	19.313	0.043749					7	4	2	0	0	0	0.17567	1	405	405		24.276	10.768	1	16856	+		43294	18551	28939	28952	49151	49151					0.1684562000218648
PRLVVTEM	8	Unmodified	_PRLVVTEM_					0	0	0			REV__MER57A-int_dup1703|chr19:23112751-23113886:+|1.179770426644866|0.266030358890427|2.15|63.0|44|3|sense	REV__MER57A-int_dup1703|chr19:23112751-23113886:+|1.179770426644866|0.266030358890427|2.15|63.0|44|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7672119140625	2	472.76532	943.516088	-0.10807	-5.1094E-05	4.2312	0.0020003	4.1231	0.0019493	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.91977	1	8430	8430		45.952	7.1458	1	501240	+		43295	29656	28940	28953	49152	49152					0.042070155424539735
PRLWLASA	8	Unmodified	_PRLWLASA_					0	0	0			REV__ENST00000580473.5_1_18:74799306-74799519:-|nuORF	REV__ENST00000580473.5_1_18:74799306-74799519:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2621154785156	2	457.266345	912.518136	-1.5615	-0.00071403	-2.9129	-0.001332	-4.4744	-0.002046	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.89962	1	8237	8237		38.806	5.9937	1	4061400	+		43296	29037	28941	28954	49153	49153					0.05837812342565485
PRLWSRSN	8	Unmodified	_PRLWSRSN_					0	0	0		ENST00000433910.1_1_1:189101497-189101806:-|nuORF	ENST00000433910.1_1_1:189101497-189101806:-|nuORF	ENST00000433910.1_1_1:189101497-189101806:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7478332519531	2	508.275232	1014.53591	0.46226	0.00023495	-1.7586	-0.00089386	-1.2964	-0.00065891	508.27411603588456	54.69	0.54738	55.097	54.822	55.369	0.40663					17	12	2	0	0	0	0.4196	1	5539	5539		51.335	12.083	1	274210			43297	11690	28942	28955	49154	49154					0.02922527597422686
PRMKPAGS	8	Unmodified	_PRMKPAGS_					0	0	0		ENST00000555848.1_1_14:100607475-100610072:+|nuORF	ENST00000555848.1_1_14:100607475-100610072:+|nuORF	ENST00000555848.1_1_14:100607475-100610072:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2276611328125	2	422.228905	842.443257	-1.6279	-0.00068734	-0.39693	-0.00016759	-2.0248	-0.00085493	422.2286431542634	57.254	2.0219	57.254	56.929	58.951	0					133	84	2	0	0	0	0.85277	1	4887	4887		25.45	0	1	766060			43298	13737	28943	28956	49155	49155					0.01573306539683017
PRNGCLHLG	9	Unmodified	_PRNGCLHLG_					0	0	0			REV__ENST00000570251.1_3_15:66678900-66679014:-|nuORF	REV__ENST00000570251.1_3_15:66678900-66679014:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7503662109375	2	483.750536	965.486519	-0.41173	-0.00019917	-0.016443	-7.9542E-06	-0.42817	-0.00020713	483.7503242735737	79.039	0.67969	79.588	79.234	79.914	0.54945					38	15	4	0	0	0	0.74721	1	9073	9073		37.159	3.6435	1	477360	+		43299	28923	28944	28957	49156	49156					0.0023949631696496
PRNGCLHLG	9	Unmodified	_PRNGCLHLG_					0	0	0			REV__ENST00000570251.1_3_15:66678900-66679014:-|nuORF	REV__ENST00000570251.1_3_15:66678900-66679014:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	483.750536	965.486519	-0.41173	-0.00019917	-0.016443	-7.9542E-06	-0.42817	-0.00020713	483.7503242735737	79.039	0.67969	79.588	79.234	79.914	0.54945	0.026851	0.00041109	NaN	37.159	38	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	477360	+		43300	28923	28944	28957							0.0023949631696496
PRNGSKQLVVI	11	Unmodified	_PRNGSKQLVVI_					0	0	0			REV__ENST00000453432.5_1_2:220094544-220097018:+|nuORF	REV__ENST00000453432.5_1_2:220094544-220097018:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.86962890625	2	605.866954	1209.71936	0.79998	0.00048468	3.5168	0.0021307	4.3167	0.0026154	605.868964835272	50.651	0.82444	51.099	50.805	51.63	0.44761					51	19	4	0	0	0	0.67778	1	4981	4981		35.152	5.982	1	1055400	+		43301	26913	28945	28958	49157	49157					0.12288456588430563
PRNISPILNRV	11	Unmodified	_PRNISPILNRV_					0	0	0		chr10:89285264-89286796|15|22.93|0.0|21.13|+|0|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286796,89288116|IFIT2,None|1	chr10:89285264-89286796|15|22.93|0.0|21.13|+|0|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286796,89288116|IFIT2,None|1	chr10:89285264-89286796|15|22.93|0.0|21.13|+|0|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286796,89288116|IFIT2,None|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	427.3028564453125	3	426.926211	1277.7568	-1.0178	-0.00043453	3.1356	0.0013387	2.1178	0.00090416	427.26316199318654	64.45	0.17349	64.48	64.343	64.516	0.030243					8	6	2	0	0	0	0.17586	1	5665	5665		34.087	20.579	1	34704			43302	85	28946	28959	49158	49158					0.12903547854034514
PRNKQGKRTT	10	Unmodified	_PRNKQGKRTT_					0	0	0			REV__ENSG00000177352|ENST00000321895|CCDC71	REV__ENSG00000177352|ENST00000321895|CCDC71	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	593.3451538085938	2	593.344178	1184.6738	-0.22642	-0.00013434	1.0123	0.00060063	0.78586	0.00046629	593.3446713104415	103.73	2.3003	103.73	103.29	105.59	0					144	55	4	0	0	0	0.86047	1	10708	10708		23.523	0	1	1751500	+		43303	22196	28947	28960	49159	49159					0.08885231126032522
PRPAVPPHPK	10	Unmodified	_PRPAVPPHPK_					0	0	0			REV__ENSG00000172671|ENST00000344646|ZFAND4	REV__ENSG00000172671|ENST00000344646|ZFAND4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.7747802734375	2	548.324725	1094.6349	-1.1628	-0.00063757	-0.40142	-0.00022011	-1.5642	-0.00085768	548.3244426398838	47.165	0.48433	48.088	47.871	48.356	0.92315					17	11	2	0	0	0	0.37624	1	4480	4480		14.865	5.682	1	222480	+		43304	21846	28948	28961	49160	49160					0.0913655056231164
PRPFNVLPVKT	11	Unmodified	_PRPFNVLPVKT_					0	0	0		ENSG00000166415|ENST00000360509|WDR72	ENSG00000166415|ENST00000360509|WDR72	ENSG00000166415|ENST00000360509|WDR72	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.30072021484375	3	423.255557	1266.74484	0.056578	2.3947E-05	3.4202	0.0014476	3.4767	0.0014716	423.2568405642906	76.516	0.15533	77.084	77.006	77.162	0.56836					7	5	2	0	0	0	0.17835	1	8712	8712		8.0344	6.8024	1	138490			43305	6193	28949	28962	49161	49161					0.12213931110818521
PRPFPLVLLEP	11	Unmodified	_PRPFPLVLLEP_					0	0	0			REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	639.385009765625	2	639.384448	1276.75434	-0.7168	-0.00045831	1.5953	0.00102	0.87849	0.00056169	639.8870912019147	52.451	0.82798	52.451	52.12	52.948	0					34	21	2	0	0	0	0.7342	1	4335	4335		25.574	2.9944	1	73423	+		43306	26035	28950	28963	49162	49162					0.12703699396342927
PRPFPLVLLEP	11	Unmodified	_PRPFPLVLLEP_					0	0	0			REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	639.384448	1276.75434	-0.7168	-0.00045831	1.5953	0.00102	0.87849	0.00056169	639.8870912019147	52.451	0.82798	52.451	52.12	52.948	0	0.11507	0.00059036	NaN	25.574	34	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73423	+		43307	26035	28950	28963							0.12703699396342927
PRPFPLVLLEP	11	Unmodified	_PRPFPLVLLEP_					0	0	0			REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	639.384448	1276.75434	0.0033631	2.1503E-06	0.97907	0.000626	0.98243	0.00062815	639.3848041896837	52.126	0.79361	52.124	51.915	52.709	-0.0020447	-0.21192	-0.00019764	NaN	25.574	27	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42905	+		43308	26035	28950	28963							0.12703699396342927
PRPFPLVLLEP	11	Unmodified	_PRPFPLVLLEP_					0	0	0			REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	639.384448	1276.75434	-0.71389	-0.00045645	2.1609	0.0013816	1.447	0.00092518	639.3856713950745	52.393	0.80134	52.369	52.018	52.82	-0.023853	0.033677	0.0013136	NaN	25.574	25	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43808	+		43309	26035	28950	28963							0.12703699396342927
PRPFPLVLLEP	11	Unmodified	_PRPFPLVLLEP_					0	0	0			REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	639.384448	1276.75434	0.58062	0.00037124	0.24775	0.00015841	0.82837	0.00052965	639.3845455694051	52.404	0.73587	52.422	52.136	52.872	0.017487	0.086461	-0.0011328	NaN	25.574	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89802	+		43310	26035	28950	28963							0.12703699396342927
PRPFPLVLLEP	11	Unmodified	_PRPFPLVLLEP_					0	0	0			REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	REV__ENST00000392859.7_1_11:118443126-118453898:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	639.384448	1276.75434	0.10571	6.759E-05	1.236	0.00079029	1.3417	0.00085788	639.3850921373196	52.387	0.63369	52.312	51.936	52.569	-0.074509	-0.023289	0.00013094	NaN	25.574	26	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141520	+		43311	26035	28950	28963							0.12703699396342927
PRPGGKPVGA	10	Unmodified	_PRPGGKPVGA_					0	0	0			REV__ENST00000553505.1_1_14:24044793-24046767:-|nuORF	REV__ENST00000553505.1_1_14:24044793-24046767:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2744445800781	2	468.274701	934.534849	-0.32916	-0.00015414	0.16652	7.7978E-05	-0.16264	-7.6159E-05	468.27462230664014	17.097	0.41941	17.017	16.801	17.221	-0.079056					30	15	3	0	0	0	0.71042	1	185	185		44.117	14.967	1	133730	+		43312	28646	28951	28964	49163	49163					0.06496313228512918
PRPGPLPV	8	Unmodified	_PRPGPLPV_					0	0	0		ENST00000538423.5_1_19:41903720-41916874:+|nuORF	ENST00000538423.5_1_19:41903720-41916874:+|nuORF	ENST00000538423.5_1_19:41903720-41916874:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	416.7547912597656	2	416.755613	831.496673	-0.81284	-0.00033876	-0.42894	-0.00017876	-1.2418	-0.00051752	416.75535780916573	69.456	0.38326	69.419	69.187	69.57	-0.036957					35	20	2	0	0	0	0.87276	1	6727	6727		29.842	1.5873	1	266910			43313	13464	28952	28965	49164	49164					0.07418427313848497
PRPGRKDRRK	10	Unmodified	_PRPGRKDRRK_					0	0	0		ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5930480957031	3	422.593566	1264.75887	-1.6666	-0.00070429	0.81967	0.00034639	-0.84691	-0.0003579	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.86151	2	4625	4608;4625		30.569	1.0181	1	771770			43314	8952	28953	28966	49165;49166	49166					0.13708021382490188
PRPGRKDRRK	10	Unmodified	_PRPGRKDRRK_					0	0	0		ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5928955078125	3	422.593566	1264.75887	-0.12961	-5.4774E-05	-0.95032	-0.0004016	-1.0799	-0.00045637	422.59301325163335	54.438	1.5298	54.43	53.553	55.082	-0.0077057					142	48	4	0	0	0	0.86207	1	4809	4809		24.232	5.7008	1	1173800			43315	8952	28953	28966	49167	49167					0.13708021382490188
PRPGRKDRRK	10	Unmodified	_PRPGRKDRRK_					0	0	0		ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.9276123046875	3	422.593566	1264.75887	-0.62547	-0.00026432	-0.49931	-0.000211	-1.1248	-0.00047533	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.86151	1	4868	4868		15.333	0.63944	1	1069500			43316	8952	28953	28966	49168	49168					0.13708021382490188
PRPGRKDRRK	10	Unmodified	_PRPGRKDRRK_					0	0	0		ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5927734375	3	422.593566	1264.75887	1.8674	0.00078915	-2.9587	-0.0012503	-1.0913	-0.00046117	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.85086	1	4819	4819		19.263	1.7947	1	997830			43317	8952	28953	28966	49169	49169					0.13708021382490188
PRPGRKDRRK	10	Unmodified	_PRPGRKDRRK_					0	0	0		ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5926208496094	3	422.593566	1264.75887	-0.68255	-0.00028844	-0.69889	-0.00029535	-1.3814	-0.00058379	422.59313934575044	54.378	2.61	54.329	53.535	56.145	-0.049271					161	81	4	0	0	0	0.86409	2	4483	4463;4483		26.063	6.0329	1	1116400			43318	8952	28953	28966	49170;49171	49171					0.13708021382490188
PRPGRKDRRK	10	Unmodified	_PRPGRKDRRK_					0	0	0		ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.59222412109375	3	422.593566	1264.75887	0.25981	0.00010979	-1.6718	-0.00070648	-1.412	-0.00059668	422.5926995986668	51.927	1.8648	52.35	51.024	52.889	0.42348					93	44	3	0	0	0	0.85441	1	5163	5163		20.837	0.80668	1	995380			43319	8952	28953	28966	49172	49172					0.13708021382490188
PRPGRKDRRK	10	Unmodified	_PRPGRKDRRK_					0	0	0		ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5923156738281	3	422.593566	1264.75887	0.68729	0.00029045	-2.3088	-0.00097569	-1.6215	-0.00068525	422.59249256358447	51.682	1.0636	52.35	51.693	52.756	0.66729					66	25	4	0	0	0	0.86802	1	5133	5133		27.047	5.3616	1	1158000			43320	8952	28953	28966	49173	49173					0.13708021382490188
PRPGRPVP	8	Unmodified	_PRPGRPVP_					0	0	0		ENSG00000108797|ENST00000264638|CNTNAP1	ENSG00000108797|ENST00000264638|CNTNAP1	ENSG00000108797|ENST00000264638|CNTNAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.26239013671875	2	438.264136	874.51372	1.5783	0.00069171	-3.9402	-0.0017268	-2.3619	-0.0010351	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.86288	1	2845	2845		26.796	0	1	92475000			43321	2431	28954	28967	49174	49174					0.07144347919643224
PRPHFADGY	9	Unmodified	_PRPHFADGY_					0	0	0			REV__ENSG00000100302|ENST00000216127|RASD2	REV__ENSG00000100302|ENST00000216127|RASD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.262451171875	2	530.253966	1058.49338	-0.11428	-6.0599E-05	-2.2309	-0.001183	-2.3452	-0.0012436	530.2525737787886	65.479	0.58937	65.609	65.287	65.876	0.12996					50	28	3	0	0	0	0.78536	1	5784	5784		29.15	2.3535	1	782560	+		43322	17166	28955	28968	49175	49175					-0.03352867530816184
PRPKELKGTHK	11	Unmodified	_PRPKELKGTHK_					0	0	0			REV__ENSG00000169126|ENST00000305242|ODAD2	REV__ENSG00000169126|ENST00000305242|ODAD2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.8846435546875	2	645.885678	1289.7568	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.62	1	105.7	105.2	106.2	0.073112								0	0	0	0.56276	1	11202	11202		20.837	0.84038	1		+		43323	21552	28956	28969	49176	49176					0.12351547854018463
PRPKKKQPPLP	11	Unmodified	_PRPKKKQPPLP_					0	0	0			REV__nc|ENSG00000119335|Q01105|SET	REV__nc|ENSG00000119335|Q01105|SET	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4058227539062	2	643.408789	1284.80303	-0.02708	-1.7423E-05	-4.4647	-0.0028726	-4.4917	-0.00289	643.4057840301668	105.94	1.5968	105.91	105.23	106.82	-0.025146					165	37	6	0	0	0	0.68378	1	11513	11513		34.173	2.6427	1	14580000	+		43324	29807	28957	28970	49177	49177					0.17201612756116447
PRPKKKQPPLP	11	Unmodified	_PRPKKKQPPLP_					0	0	0			REV__nc|ENSG00000119335|Q01105|SET	REV__nc|ENSG00000119335|Q01105|SET	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4064331054688	2	643.408789	1284.80303	-0.027625	-1.7774E-05	-2.8132	-0.00181	-2.8408	-0.0018278	643.4069538956494	107.53	1.1842	107.49	106.64	107.82	-0.034401					87	27	4	0	0	0	0.72228	1	11658	11658		27.882	2.3082	1	2502500	+		43325	29807	28957	28970	49178	49178					0.17201612756116447
PRPLAPIPVS	10	Unmodified	_PRPLAPIPVS_					0	0	0			REV__ENST00000285379.9_1_8:86376191-86377596:+|nuORF	REV__ENST00000285379.9_1_8:86376191-86377596:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2827758789062	2	523.821484	1045.62842	0.83226	0.00043595	-3.3467	-0.0017531	-2.5144	-0.0013171	523.819873889934	96.324	1.3204	96.729	95.809	97.129	0.40451					43	31	2	0	0	0	0.37624	1	11644	11644		14.865	0	1	122930	+		43326	24633	28958	28971	49179	49179					0.10742612610920332
PRPLGSIQRP	10	Unmodified	_PRPLGSIQRP_					0	0	0		ENST00000476881.2_1_7:100174203-100174533:-|nuORF;ENST00000485071.2_1_7:100173012-100174533:-|nuORF;ENSG00000077454|ENST00000310300|LRCH4	ENST00000476881.2_1_7:100174203-100174533:-|nuORF	ENST00000476881.2_1_7:100174203-100174533:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8324584960938	2	560.832914	1119.65128	1.8006	0.0010099	-1.9726	-0.0011063	-0.17196	-9.6442E-05	560.8318239087129	24.268	0.51673	23.754	23.451	23.968	-0.51365					18	11	2	0	0	0	0.80179	1	1163	1163		39.253	6.4404	1	97186			43327	1382	28959	28972	49180	49180					0.09623631728436521
PRPLGSIQRP	10	Unmodified	_PRPLGSIQRP_					0	0	0		ENST00000476881.2_1_7:100174203-100174533:-|nuORF;ENST00000485071.2_1_7:100173012-100174533:-|nuORF;ENSG00000077454|ENST00000310300|LRCH4	ENST00000476881.2_1_7:100174203-100174533:-|nuORF	ENST00000476881.2_1_7:100174203-100174533:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	560.832914	1119.65128	1.0465	0.0005869	-0.87358	-0.00048993	0.1729	9.697E-05	560.8323633021222	24.3	0.44547	23.918	23.707	24.153	-0.38178	0.081765	0.00058974	NaN	39.253	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86214			43328	1382	28959	28972							0.09623631728436521
PRPLLGLARQS	11	Unmodified	_PRPLLGLARQS_					0	0	0		ENST00000331569.5_1_8:37557227-37557494:+|nuORF	ENST00000331569.5_1_8:37557227-37557494:+|nuORF	ENST00000331569.5_1_8:37557227-37557494:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3663330078125	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.7342	1	12385	12385		25.574	1.0549	1	3346600			43329	10128	28960	28973	49181	49181					0.12459876308275852
PRPLPGTPPT	10	Unmodified	_PRPLPGTPPT_					0	0	0			REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.793701171875	2	516.795466	1031.57638	-0.047699	-2.465E-05	-4.0302	-0.0020828	-4.0779	-0.0021075	516.793282030647	86.386	2.8071	86.453	84.68	87.487	0.067436					129	64	3	0	0	0	0.86718	1	8707	8707		27.882	3.6795	1	264930	+		43330	18513	28961	28974	49182	49182					0.06185449197187154
PRPLRHRS	8	Unmodified	_PRPLRHRS_					0	0	0		ENST00000599429.5_1_19:17448434-17449065:+|nuORF;ENST00000598038.5_1_19:17448361-17449192:+|nuORF;ENST00000324894.12_1_19:17448434-17449192:+|nuORF;ENST00000596218.5_1_19:17448036-17449192:+|nuORF;ENST00000594345.5_1_19:17447879-17449192:+|nuORF;ENST00000600610.5_1_19:17448460-17449192:+|nuORF;ENST00000596001.5_1_19:17448603-17449192:+|nuORF	ENST00000599429.5_1_19:17448434-17449065:+|nuORF	ENST00000599429.5_1_19:17448434-17449065:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8040466308594	2	509.804491	1017.59443	0.41341	0.00021076	-1.1176	-0.00056975	-0.70418	-0.00035899	509.80378130113013	99.26	1.5845	99.308	98.978	100.56	0.047523					71	36	3	0	0	0	0.86288	1	10663	10663		26.796	0	1	477970			43331	10066	28962	28975	49183	49183					0.08633628962547846
PRPLRREKCW	10	Carbamidomethyl (C)	_PRPLRREKC(Carbamidomethyl (C))W_	PRPLRREKC(1)W		PRPLRREKC(48)W		0	1	0		chr19:50802614-50804572|56|13.11|0.7|4.22|-|2|C19orf48P,C19orf48P|1	chr19:50802614-50804572|56|13.11|0.7|4.22|-|2|C19orf48P,C19orf48P|1	chr19:50802614-50804572|56|13.11|0.7|4.22|-|2|C19orf48P,C19orf48P|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.5903625488281	3	466.590945	1396.75101	0.051039	2.3814E-05	-3.3411	-0.0015589	-3.2901	-0.0015351	466.5893455631255	55.718	0.63055	56.277	55.941	56.572	0.55954					39	16	4	0	0	0	0.63899	1	5750	5750		47.96	11.642	1	1606400			43332	292	28963	28976	49184	49184	2				0.06850126070708029
PRPPAPLPLSR	11	Unmodified	_PRPPAPLPLSR_					0	0	0		nc|ENSG00000038382|O75962-5|TRIO;ENST00000515144.5_1_5:14293150-14488426:+|nuORF	nc|ENSG00000038382|O75962-5|TRIO	nc|ENSG00000038382|O75962-5|TRIO	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9138488769531	3	400.911902	1199.71388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.04	1	113.07	112.57	113.57	0.030602								0	0	0	0.56276	1	13662	13662		21.032	1.9287	1				43333	14744	28964	28977	49185	49185					0.12200777796579132
PRPPLTRRTG	10	Unmodified	_PRPPLTRRTG_					0	0	0		nc|ENSG00000156042|Q5T0N1-2|CFAP70;nc|ENSG00000156042|Q5T0N1|CFAP70;ENSG00000156042|ENST00000355577|CFAP70;ENST00000493787.5_1_10:75056784-75072389:-|nuORF	nc|ENSG00000156042|Q5T0N1-2|CFAP70	nc|ENSG00000156042|Q5T0N1-2|CFAP70	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.843017578125	2	575.843813	1149.67307	-1.6501	-0.00095021	-0.26578	-0.00015305	-1.9159	-0.0011033	575.8434791868526	90.193	1.8473	90.663	90.18	92.028	0.47068					146	46	4	0	0	0	0.8651	1	10891	10891		25.574	3.8883	1	1810000			43334	5360	28965	28978	49186	49186					0.10422436476960684
PRPPPIDPI	9	Unmodified	_PRPPPIDPI_					0	0	0			REV__ENST00000507334.1_1_4:144359455-144361094:+|nuORF	REV__ENST00000507334.1_1_4:144359455-144361094:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29083251953125	2	501.292559	1000.57057	-0.86867	-0.00043546	-3.0512	-0.0015296	-3.9199	-0.001965	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.7932	1	9677	9677		23.042	0	1	2445400	+		43335	17759	28966	28979	49187	49187					0.07030350685522535
PRPRDKRQLLD	11	Unmodified	_PRPRDKRQLLD_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.2748107910156	3	465.27227	1392.79498	0.97954	0.00045575	4.2933	0.0019976	5.2729	0.0024533	465.2741917986913	16.319	0.22547	16.397	16.275	16.5	0.077959					20	9	3	0	0	0	0.75121	1	94	94		21.78	3.9473	1	49193			43336	2306	28967	28980	49188	49188					0.11429433768694253
PRPRDKRQLLD	11	Unmodified	_PRPRDKRQLLD_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	465.27227	1392.79498	0.18705	8.7029E-05	3.6896	0.0017167	3.8767	0.0018037	465.2738820844606	16.494	0.32715	16.41	16.291	16.618	-0.083363	0.0067097	-0.00076587	NaN	21.78	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53915			43337	2306	28967	28980							0.11429433768694253
PRPRILRGSL	10	Unmodified	_PRPRILRGSL_					0	0	0			REV__ENST00000575556.1_1_16:67970595-67970706:-|nuORF	REV__ENST00000575556.1_1_16:67970595-67970706:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	583.8585815429688	2	582.869831	1163.72511	0.86234	0.00050263	0.87224	0.0005084	1.7346	0.001011	582.868234287356	98.455	0.13506	98.611	98.499	98.634	0.15659					4	2	2	0	0	0	0.37624	1	10215	10215		39.253	19.256	1	23218	+		43338	28985	28968	28981	49189	49189					0.14979599890762074
PRPRPLNG	8	Unmodified	_PRPRPLNG_					0	0	0			REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.7657470703125	2	453.767043	905.519533	-1.8618	-0.00084484	-1.2371	-0.00056135	-3.0989	-0.0014062	453.76637939924865	41.209	0.88986	41.209	40.877	41.766	0					61	26	3	0	0	0	0.884	1	2830	2830		33.516	3.0119	1	304750	+		43339	28202	28969	28982	49190	49190					0.06299446431319211
PRPRPLNG	8	Unmodified	_PRPRPLNG_					0	0	0			REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.76556396484375	2	453.767043	905.519533	0.27129	0.0001231	-3.0095	-0.0013656	-2.7382	-0.0012425	453.76550964369613	41.947	1.1764	41.916	41.067	42.244	-0.030991					46	29	2	0	0	0	0.85277	1	3082	3082		25.45	2.4135	1	291970	+		43340	28202	28969	28982	49191	49191					0.06299446431319211
PRPRPLNG	8	Unmodified	_PRPRPLNG_					0	0	0			REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.76611328125	2	453.767043	905.519533	0.25664	0.00011645	-2.955	-0.0013409	-2.6984	-0.0012245	453.7655790571442	42.641	1.9691	42.612	42.161	44.13	-0.029461					74	47	2	0	0	0	0.86288	1	3182	3182		26.796	3.7536	1	288700	+		43341	28202	28969	28982	49192	49192					0.06299446431319211
PRPRPLNG	8	Unmodified	_PRPRPLNG_					0	0	0			REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.76568603515625	2	453.767043	905.519533	-1.2902	-0.00058543	-2.2694	-0.0010298	-3.5595	-0.0016152	453.76607829009424	41.177	0.83587	41.181	40.825	41.661	0.0043983					78	27	4	0	0	0	0.884	1	2674	2674		33.516	4.366	1	657720	+		43342	28202	28969	28982	49193	49193					0.06299446431319211
PRPRPLNG	8	Unmodified	_PRPRPLNG_					0	0	0			REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.7651672363281	2	453.767043	905.519533	0.21911	9.9423E-05	-3.2084	-0.0014559	-2.9893	-0.0013564	453.7653867501488	40.992	0.89008	41.065	40.735	41.626	0.073414					74	28	3	0	0	0	0.90465	1	2641	2641		40.573	3.4135	1	782930	+		43343	28202	28969	28982	49194	49194					0.06299446431319211
PRPRPLNG	8	Unmodified	_PRPRPLNG_					0	0	0			REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.7669982910156	2	453.767043	905.519533	-0.098866	-4.4862E-05	-2.9209	-0.0013254	-3.0198	-0.0013703	453.7655359393201	41.096	0.91404	41.05	40.674	41.588	-0.045467					76	30	3	0	0	0	0.89962	1	2669	2669		38.806	3.1879	1	750830	+		43344	28202	28969	28982	49195	49195					0.06299446431319211
PRPRPLNG	8	Unmodified	_PRPRPLNG_					0	0	0			REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.7659912109375	2	453.767043	905.519533	-0.13114	-5.9507E-05	-2.4763	-0.0011237	-2.6075	-0.0011832	453.7659298914551	41.976	1.7233	41.931	41.177	42.9	-0.045471					104	47	4	0	0	0	0.88915	2	2775	2775;2787		42.474	7.2737	1	768160	+		43345	28202	28969	28982	49196;49197	49196					0.06299446431319211
PRPRPLNG	8	Unmodified	_PRPRPLNG_					0	0	0			REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7651062011719	2	453.767043	905.519533	-1.5148	-0.00068738	-2.3218	-0.0010535	-3.8366	-0.0017409	453.76593536298236	40.85	0.48289	41.439	41.181	41.664	0.58915					44	13	4	0	0	0	0.91005	1	3547	3547		42.474	1.9018	1	23640000	+		43346	28202	28969	28982	49198	49198					0.06299446431319211
PRPRPLNG	8	Unmodified	_PRPRPLNG_					0	0	0			REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	REV__ENST00000526185.5_1_11:47196418-47196634:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.76641845703125	2	453.767043	905.519533	-1.6067	-0.00072906	-2.0857	-0.00094641	-3.6924	-0.0016755	453.76606039248026	41.272	1.9725	41.906	41.675	43.648	0.6339					112	50	4	0	0	0	0.92973	1	3651	3651		50.025	0	1	8512600	+		43347	28202	28969	28982	49199	49199					0.06299446431319211
PRPRTGPE	8	Unmodified	_PRPRTGPE_					0	0	0		nc|ENSG00000089472|Q9BQS7-2|HEPH;ENSG00000089472|ENST00000343002|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH	nc|ENSG00000089472|Q9BQS7-2|HEPH	nc|ENSG00000089472|Q9BQS7-2|HEPH	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.2481384277344	2	455.248683	908.482814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.003	1	53	52.5	53.5	-0.0033035								0	0	0	0.30074	1	4612	4612		40.778	5.1599	1				43348	1624	28970	28983	49200	49200					0.02491149814761684
PRPSKIPGP	9	Unmodified	_PRPSKIPGP_					0	0	0			REV__ENST00000486831.5_1_3:138189538-138191915:+|nuORF	REV__ENST00000486831.5_1_3:138189538-138191915:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.78564453125	2	474.784902	947.55525	-0.57214	-0.00027165	0.59539	0.00028268	0.023246	1.1037E-05	474.78494123540037	26.913	1.0247	26.885	26.701	27.726	-0.027706					33	25	2	0	0	0	0.78983	1	1187	1187		27.882	1.0861	1	26678	+		43349	20597	28971	28984	49201	49201					0.07937483888326824
PRPSKIPGP	9	Unmodified	_PRPSKIPGP_					0	0	0			REV__ENST00000486831.5_1_3:138189538-138191915:+|nuORF	REV__ENST00000486831.5_1_3:138189538-138191915:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	474.784902	947.55525	-0.57214	-0.00027165	0.59539	0.00028268	0.023246	1.1037E-05	474.78494123540037	26.913	1.0247	26.885	26.701	27.726	-0.027706	0.047358	0.00059038	NaN	27.882	33	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26678	+		43350	20597	28971	28984							0.07937483888326824
PRPSLHPGE	9	Unmodified	_PRPSLHPGE_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.26019287109375	2	495.261791	988.509028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.869	1	36.117	35.617	36.617	0.24769								0	0	0	0.2969	1	2775	2775		31.955	1.4512	1		+		43351	21394	28972	28985	49202	49202					0.014314189862375315
PRPSRKKRRRR	11	Unmodified	_PRPSRKKRRRR_					0	0	0		ENST00000296490.7_1_3:52312489-52312597:-|nuORF	ENST00000296490.7_1_3:52312489-52312597:-|nuORF	ENST00000296490.7_1_3:52312489-52312597:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.8439025878906	3	498.322181	1491.94471	-1.3829	-0.00068915	-0.093724	-4.6705E-05	-1.4767	-0.00073585	498.3222532931364	48.401	0.64444	48.87	48.628	49.272	0.46941					21	15	2	0	0	0	0.18362	1	4640	4640		4.8861	3.4674	1	166310			43352	9736	28973	28986	49203	49203					0.21841843621791668
PRPSWSAH	8	Unmodified	_PRPSWSAH_					0	0	0		ENST00000558590.1_1_14:103395319-103397951:+|nuORF	ENST00000558590.1_1_14:103395319-103397951:+|nuORF	ENST00000558590.1_1_14:103395319-103397951:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.240966796875	2	469.235576	936.456599	-1.0139	-0.00047578	-1.0282	-0.00048247	-2.0422	-0.00095825	469.2349969087015	38.995	0.4656	39.337	39.022	39.488	0.34187					14	10	2	0	0	0	0.4196	1	3211	3211		38.806	13.356	1	74388			43353	13790	28974	28987	49204	49204					-0.014171193567221962
PRPTKKHKGG	10	Unmodified	_PRPTKKHKGG_					0	0	0		nc|ENSG00000185008|Q9HCK4|ROBO2;nc|ENSG00000185008|Q9HCK4-3|ROBO2;ENSG00000185008|ENST00000696593|ROBO2	nc|ENSG00000185008|Q9HCK4|ROBO2	nc|ENSG00000185008|Q9HCK4|ROBO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3324584960938	2	553.333082	1104.65161	-0.75754	-0.00041917	-0.44783	-0.0002478	-1.2054	-0.00066697	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.8651	1	10297	10297		25.574	1.0549	1	4355400			43354	15148	28975	28988	49205	49205					0.10347051448275124
PRPVAGDFI	9	Unmodified	_PRPVAGDFI_					0	0	0		nc|ENSG00000107018|P04808-2|RLN1;nc|ENSG00000107014|P04090-2|RLN2	nc|ENSG00000107018|P04808-2|RLN1	nc|ENSG00000107018|P04808-2|RLN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2671203613281	2	486.269084	970.523616	-1.0289	-0.00050034	-2.8077	-0.0013653	-3.8366	-0.0018656	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.72402	1	8234	8234		38.806	1.647	1	1182200			43355	14836	28976	28989	49206	49206					0.0371749113437545
PRPVPLPG	8	Unmodified	_PRPVPLPG_					0	0	0		ENST00000486339.6_1_16:2155757-2157078:-|nuORF	ENST00000486339.6_1_16:2155757-2157078:-|nuORF	ENST00000486339.6_1_16:2155757-2157078:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7549133300781	2	416.755613	831.496673	0.047442	1.9772E-05	-1.1428	-0.00047629	-1.0954	-0.00045652	416.7550156148421	65.976	1.6616	66.528	65.948	67.61	0.5526					110	49	3	0	0	0	0.89457	1	7176	7176		37.028	0	1	3875200			43356	12580	28977	28990	49207	49207					0.07418427313848497
PRPVTLRTNTL	11	Unmodified	_PRPVTLRTNTL_					0	0	0		nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-2|NOP2;ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-4|NOP2	nc|ENSG00000111641|P46087-3|NOP2	nc|ENSG00000111641|P46087-3|NOP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.376953125	2	634.377686	1266.74082	1.3188	0.00083664	-1.7871	-0.0011337	-0.46828	-0.00029707	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.60058	5	12700	12604;12700;12735;12805;12880		44.377	10.205	1	12917000			43357	2591	28978	28991	49208;49209;49210;49211;49212	49209					0.11811841617168284
PRPVTLRTNTL	11	Unmodified	_PRPVTLRTNTL_					0	0	0		nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-2|NOP2;ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-4|NOP2	nc|ENSG00000111641|P46087-3|NOP2	nc|ENSG00000111641|P46087-3|NOP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3757934570312	2	634.377686	1266.74082	0.93365	0.00059228	-1.959	-0.0012427	-1.0253	-0.00065045	634.3762780737788	111.26	0.49553	111.33	110.97	111.47	0.069542					38	19	2	0	0	0	0.69248	1	11964	11964		32.751	1.2207	1	1383700			43358	2591	28978	28991	49213	49213					0.11811841617168284
PRPVTLRTNTL	11	Unmodified	_PRPVTLRTNTL_					0	0	0		nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-2|NOP2;ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-4|NOP2	nc|ENSG00000111641|P46087-3|NOP2	nc|ENSG00000111641|P46087-3|NOP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3780517578125	2	634.377686	1266.74082	0.93391	0.00059245	-2.112	-0.0013398	-1.1781	-0.00074736	634.3762099028429	112.22	0.2012	112.29	112.11	112.31	0.066025					17	6	3	0	0	0	0.72739	1	12075	12075		27.047	4.0048	1	745330			43359	2591	28978	28991	49214	49214					0.11811841617168284
PRPVTLRTNTL	11	Unmodified	_PRPVTLRTNTL_					0	0	0		nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-2|NOP2;ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-4|NOP2	nc|ENSG00000111641|P46087-3|NOP2	nc|ENSG00000111641|P46087-3|NOP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3771362304688	2	634.377686	1266.74082	-1.1773	-0.00074688	0.036396	2.3089E-05	-1.1409	-0.00072379	634.3774291341157	112.05	1.1748	112.03	111.8	112.98	-0.019882					84	36	4	0	0	0	0.69995	1	11953	11953		31.53	2.3598	1	22589000			43360	2591	28978	28991	49215	49215					0.11811841617168284
PRPVTLRTNTL	11	Unmodified	_PRPVTLRTNTL_					0	0	0		nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-2|NOP2;ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-4|NOP2	nc|ENSG00000111641|P46087-3|NOP2	nc|ENSG00000111641|P46087-3|NOP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3759765625	2	634.377686	1266.74082	2.2036	0.0013979	-3.0142	-0.0019121	-0.81065	-0.00051426	634.3750780706696	111.6	0.45724	111.65	111.39	111.85	0.041832					52	15	4	0	0	0	0.69248	1	13522	13522		32.751	2.4328	1	7905500			43361	2591	28978	28991	49216	49216					0.11811841617168284
PRPWHWHWRRR	11	Unmodified	_PRPWHWHWRRR_					0	0	0			REV__ENST00000321582.9_1_9:124855435-124855555:-|nuORF	REV__ENST00000321582.9_1_9:124855435-124855555:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.23211669921875	4	418.226351	1668.8763	-1.8945	-0.00079232	0.52162	0.00021816	-1.3729	-0.00057416	418.2269707903881	33.022	0.071423	33.075	33.011	33.082	0.05246					4	2	2	0	0	0	0.1838	1	1573	1573		3.2113	1.6883	1	26684	+		43362	25015	28979	28992	49217	49217					0.0686159904194028
PRPYAQIN	8	Unmodified	_PRPYAQIN_					0	0	0		ENST00000507963.5_1_5:92916493-92916754:-|nuORF	ENST00000507963.5_1_5:92916493-92916754:-|nuORF	ENST00000507963.5_1_5:92916493-92916754:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3099670410156	2	479.758884	957.503215	-0.20944	-0.00010048	-0.58902	-0.00028259	-0.79846	-0.00038307	479.7586793472167	46.619	0.60838	46.54	46.219	46.827	-0.079002					24	15	2	0	0	0	0.4196	1	3398	3398		33.516	0	1	105360			43363	12969	28980	28993	49218	49218					0.02276320474561544
PRQARGQG	8	Unmodified	_PRQARGQG_					0	0	0			REV__ENST00000519478.1_1_5:139248990-139250660:-|nuORF	REV__ENST00000519478.1_1_5:139248990-139250660:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.8846130371094	2	435.23865	868.462747	0.29815	0.00012977	3.0901	0.0013449	3.3882	0.0014747	435.2398090871386	28.451	0.60146	28.473	28.102	28.704	0.021948					53	31	2	0	0	0	0.4196	1	1147	1147		18.324	0	1	146160	+		43364	28081	28981	28994	49219	49219					0.023253988748138
PRQFPSPPRP	10	Unmodified	_PRQFPSPPRP_					0	0	0			REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3427124023438	2	589.825089	1177.63563	-0.68721	-0.00040534	-3.3904	-0.0019998	-4.0777	-0.0024051	589.8230656620397	96.243	2.0403	96.291	95.291	97.331	0.047798					79	47	2	0	0	0	0.37624	1	10164	10164		36.447	0	1	107930	+		43365	27027	28982	28995	49220	49220					0.05391345211364751
PRQGRKKTY	9	Unmodified	_PRQGRKKTY_					0	0	0			REV__ENSG00000108591|ENST00000225729|DRG2	REV__ENSG00000108591|ENST00000225729|DRG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.328369140625	2	567.330539	1132.64652	1.8589	0.0010546	-3.1789	-0.0018035	-1.32	-0.00074889	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.67345	1	10069	10069		42.396	5.237	1	15439000	+		43366	17724	28983	28996	49221	49221					0.0855074758567298
PRQGRKKTY	9	Unmodified	_PRQGRKKTY_					0	0	0			REV__ENSG00000108591|ENST00000225729|DRG2	REV__ENSG00000108591|ENST00000225729|DRG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3302001953125	2	567.330539	1132.64652	0.79571	0.00045143	-2.2136	-0.0012558	-1.4178	-0.00080439	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.78536	1	9657	9657		29.15	4.6304	1	18145000	+		43367	17724	28983	28996	49222	49222					0.0855074758567298
PRQLQNLVPD	10	Unmodified	_PRQLQNLVPD_					0	0	0			REV__ENSG00000171988|ENST00000399262|JMJD1C	REV__ENSG00000171988|ENST00000399262|JMJD1C	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.3262329101562	2	590.327662	1178.64077	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.669	1	34.669	34.169	35.169	0								0	0	0	0.45132	1	1879	1879		19.997	0	1		+		43368	21793	28984	28997	49223	49223					0.05859604283318731
PRQLSKNQIII	11	Unmodified	_PRQLSKNQIII_					0	0	0		ENST00000248098.7_1_16:1749525-1749642:+|nuORF	ENST00000248098.7_1_16:1749525-1749642:+|nuORF	ENST00000248098.7_1_16:1749525-1749642:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2674865722656	3	437.269866	1308.78777	-1.7045	-0.00074531	-2.8139	-0.0012304	-4.5184	-0.0019757	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.76892	1	4339	4339		17.833	1.3033	1	3449100			43369	9278	28985	28998	49224	49224					0.14572701168299318
PRQLSKNQIII	11	Unmodified	_PRQLSKNQIII_					0	0	0		ENST00000248098.7_1_16:1749525-1749642:+|nuORF	ENST00000248098.7_1_16:1749525-1749642:+|nuORF	ENST00000248098.7_1_16:1749525-1749642:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2675476074219	3	437.269866	1308.78777	-1.0895	-0.00047642	-3.583	-0.0015667	-4.6725	-0.0020431	437.2682076309449	48.376	1.4718	48.845	48.119	49.591	0.46941					123	36	4	0	0	0	0.76579	1	4639	4639		18.531	0	1	3096400			43370	9278	28985	28998	49225	49225					0.14572701168299318
PRQLVFHIGHG	11	Unmodified	_PRQLVFHIGHG_					0	0	0		ENSG00000049239|ENST00000377403|H6PD;nc|ENSG00000049239|O95479-2|H6PD	ENSG00000049239|ENST00000377403|H6PD	ENSG00000049239|ENST00000377403|H6PD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	630.8546142578125	2	630.851638	1259.68872	-0.68598	-0.00043275	0.2426	0.00015304	-0.44338	-0.00027971	630.8511313955586	60.341	0.52102	60.372	60.14	60.661	0.0312					22	13	2	0	0	0	0.75495	1	5601	5601		20.947	0.10978	1	156490			43371	982	28986	28999	49226	49226					0.06926722994035117
PRQPLLCSSL	10	Unmodified	_PRQPLLCSSL_					0	0	0			REV__ENST00000487875.5_1_15:91490935-91491606:+|nuORF	REV__ENST00000487875.5_1_15:91490935-91491606:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.8299560546875	2	557.307884	1112.60121	0.35121	0.00019573	-2.3	-0.0012818	-1.9488	-0.0010861	557.8073820930985	100.75	0.91193	100.96	100.41	101.32	0.2058					23	21	2	0	0	0	0.37624	1	10583	10583		45.972	10.772	1	114920	+		43372	27583	28987	29000	49227	49227					0.049417610082628016
PRQPLPLGI	9	Unmodified	_PRQPLPLGI_					0	0	0		ENSG00000099864|ENST00000338448|PALM	ENSG00000099864|ENST00000338448|PALM	ENSG00000099864|ENST00000338448|PALM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	495.8066101074219	2	495.808377	989.6022	-1.6286	-0.00080749	-2.8884	-0.0014321	-4.517	-0.0022396	495.80696727769515	90.909	1.4028	91.089	90.68	92.083	0.18029					60	33	3	0	0	0	0.78851	1	9109	9109		28.254	2.8041	1	403110			43373	1772	28988	29001	49228	49228					0.10698343439469227
PRRARLPPLFT	11	Unmodified	_PRRARLPPLFT_					0	0	0			REV__ENST00000463422.5_1_2:85981774-86000028:+|nuORF	REV__ENST00000463422.5_1_2:85981774-86000028:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.93878173828125	3	441.938451	1322.79352	-0.63554	-0.00028087	3.7441	0.0016547	3.1086	0.0013738	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.77205	1	4591	4591		17.167	2.3879	1	409610	+		43374	27074	28989	29002	49229	49229					0.14503844470573313
PRRARVSGAGT	11	Unmodified	_PRRARVSGAGT_					0	0	0		ENST00000397778.6_1_18:77710954-77711659:-|nuORF	ENST00000397778.6_1_18:77710954-77711659:-|nuORF	ENST00000397778.6_1_18:77710954-77711659:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.3228759765625	2	564.323245	1126.63194	0.85504	0.00048252	-0.7641	-0.0004312	0.090942	5.1321E-05	564.3227484395347	16.363	0.50572	15.764	15.555	16.06	-0.59873					26	10	4	0	0	0	0.69931	1	123	123		31.634	7.1151	1	893940			43375	11160	28990	29003	49230	49230					0.07368675437510319
PRRAVVRRR	9	Unmodified	_PRRAVVRRR_					0	0	0		chr11:46312646-46312851|27|31.44|0.58|5.77|+|2|None,CREB3L1|1	chr11:46312646-46312851|27|31.44|0.58|5.77|+|2|None,CREB3L1|1	chr11:46312646-46312851|27|31.44|0.58|5.77|+|2|None,CREB3L1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.376220703125	2	583.378689	1164.74283	-0.52385	-0.0003056	-2.6732	-0.0015595	-3.197	-0.0018651	583.3768968975907	45.113	2.0669	45.082	44.07	46.137	-0.031067					141	47	4	0	0	0	0.7932	1	3616	3616		18.324	0.95945	1	1958600			43376	101	28991	29004	49231	49231					0.16704359936261426
PRRAWGFSE	9	Unmodified	_PRRAWGFSE_					0	0	0			REV__ENSG00000100439|ENST00000428304|ABHD4	REV__ENSG00000100439|ENST00000428304|ABHD4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2656860351562	2	553.280515	1104.54648	0.087335	4.8321E-05	1.7325	0.00095853	1.8198	0.0010069	553.2808826711542	53.998	0.42205	54.405	54.235	54.657	0.40663					14	9	2	0	0	0	0.20789	1	5483	5483		30.504	3.7075	1	162260	+		43377	17195	28992	29005	49232	49232					-0.0016148974814313988
PRRDALPP	8	Unmodified	_PRRDALPP_					0	0	0		ENST00000565070.5_1_16:27237776-27268891:-|nuORF	ENST00000565070.5_1_16:27237776-27268891:-|nuORF	ENST00000565070.5_1_16:27237776-27268891:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.265380859375	2	461.266876	920.519199	-1.0841	-0.00050006	-2.5151	-0.0011601	-3.5992	-0.0016602	461.2654587465461	92.902	1.3314	93.128	92.662	93.993	0.22547					93	31	4	0	0	0	0.89043	1	9440	9440		35.618	2.8059	1	1040400			43378	13905	28993	29006	49233	49233					0.0557602671146924
PRRETKPG	8	Unmodified	_PRRETKPG_					0	0	0		ENST00000515152.1_1_4:185570945-185573203:+|nuORF	ENST00000515152.1_1_4:185570945-185573203:+|nuORF	ENST00000515152.1_1_4:185570945-185573203:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76873779296875	2	470.769783	939.525013	-0.63024	-0.0002967	-1.6901	-0.00079565	-2.3203	-0.0010924	470.76900608470595	48.857	1.2932	49.317	48.985	50.278	0.45983					73	31	4	0	0	0	0.91977	1	4739	4739		45.952	1.8352	1	21584000			43379	13075	28994	29007	49234	49234					0.052831252231385406
PRRETKPG	8	Unmodified	_PRRETKPG_					0	0	0		ENST00000515152.1_1_4:185570945-185573203:+|nuORF	ENST00000515152.1_1_4:185570945-185573203:+|nuORF	ENST00000515152.1_1_4:185570945-185573203:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7709655761719	2	470.769783	939.525013	-0.26514	-0.00012482	-1.518	-0.00071462	-1.7831	-0.00083944	470.76915813148867	64.797	1.286	65.183	64.351	65.637	0.38615					55	30	2	0	0	0	0.89043	1	7005	7005		35.618	1.4457	1	115640			43380	13075	28994	29007	49235	49235					0.052831252231385406
PRRGLSNIVLF	11	Unmodified	_PRRGLSNIVLF_					0	0	0			REV__nc|ENSG00000197901|Q4U2R8-3|SLC22A6	REV__nc|ENSG00000197901|Q4U2R8-3|SLC22A6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	424.30609130859375	3	424.59094	1270.75099	0.17077	7.2507E-05	-3.2632	-0.0013855	-3.0924	-0.001313	424.5894955958566	38.262	0.50248	38.356	38.154	38.656	0.094318					28	17	2	0	0	0	0.17784	1	2244	2244		22.562	8.4756	1	114950	+		43381	23278	28995	29008	49236	49236					0.1264444934236053
PRRGLSNIVLF	11	Unmodified	_PRRGLSNIVLF_					0	0	0			REV__nc|ENSG00000197901|Q4U2R8-3|SLC22A6	REV__nc|ENSG00000197901|Q4U2R8-3|SLC22A6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	424.59094	1270.75099	-0.011658	-4.95E-06	-7.2995	-0.0030993	-7.3112	-0.0031043	424.922289919678	38.259	0.20044	38.601	38.497	38.697	0.34187	0.13779	-0.0058645	NaN	22.562	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34210	+		43382	23278	28995	29008							0.1264444934236053
PRRGPPPV	8	Unmodified	_PRRGPPPV_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|64|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|64|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2626647949219	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.86791	1	3634	3634		28.254	7.7724	1	4268300	+		43383	29628	28996	29009	49237	49237					0.07144347919654592
PRRGQGGF	8	Unmodified	_PRRGQGGF_					0	0	0		ENST00000421699.6_2_9:131019490-131019556:-|nuORF	ENST00000421699.6_2_9:131019490-131019556:-|nuORF	ENST00000421699.6_2_9:131019490-131019556:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77117919921875	2	437.735743	873.456933	-0.947	-0.00041454	-3.7715	-0.0016509	-4.7185	-0.0020654	437.73396088948874	38.775	0.4617	39.117	38.896	39.358	0.34187					16	10	2	0	0	0	0.4196	1	3241	3241		20.482	11.011	1	38285			43384	11469	28997	29010	49238	49238					0.015143003631465035
PRRGTRPSRKL	11	Unmodified	_PRRGTRPSRKL_					0	0	0			REV__ENST00000251102.12_1_16:57965650-57974178:-|nuORF	REV__ENST00000251102.12_1_16:57965650-57974178:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.93994140625	3	441.940855	1322.80073	-1.6543	-0.0007311	-0.52949	-0.000234	-2.1838	-0.00096511	441.9404880038731	55.736	1.19	55.736	54.998	56.188	0					100	33	4	0	0	0	0.75779	1	4769	4769		20.315	2.4819	1	347630	+		43385	24286	28998	29011	49239	49239					0.15224577071035128
PRRGTRPSRKL	11	Unmodified	_PRRGTRPSRKL_					0	0	0			REV__ENST00000251102.12_1_16:57965650-57974178:-|nuORF	REV__ENST00000251102.12_1_16:57965650-57974178:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2734680175781	3	441.940855	1322.80073	-1.4729	-0.00065094	-0.90136	-0.00039835	-2.3743	-0.0010493	441.94033054697593	56.641	1.0598	56.713	56.56	57.62	0.071835					108	50	3	0	0	0	0.79476	1	4788	4788		12.433	0.50046	1	756750	+		43386	24286	28998	29011	49240	49240					0.15224577071035128
PRRKIKRIY	9	Unmodified	_PRRKIKRIY_					0	0	0		ENST00000318121.7_1_1:36230063-36230255:-|nuORF	ENST00000318121.7_1_1:36230063-36230255:-|nuORF	ENST00000318121.7_1_1:36230063-36230255:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.4019165039062	2	615.401299	1228.78804	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.248	1	23.308	22.808	23.808	0.060431								0	0	0	0.34348	1	759	759		16.473	1.6083	1				43387	10003	28999	29012	49241	49241					0.182801656788115
PRRKIKRIY	9	Unmodified	_PRRKIKRIY_					0	0	0		ENST00000318121.7_1_1:36230063-36230255:-|nuORF	ENST00000318121.7_1_1:36230063-36230255:-|nuORF	ENST00000318121.7_1_1:36230063-36230255:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.4087524414062	2	615.401299	1228.78804	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.19	1	46.111	45.611	46.611	-0.079002								0	0	0	0.33676	1	3373	3373		18.324	1.8513	1				43388	10003	28999	29012	49242	49242					0.182801656788115
PRRKLRPRP	9	Unmodified	_PRRKLRPRP_					0	0	0			REV__ENSG00000197077|ENST00000358431|KIAA1671	REV__ENSG00000197077|ENST00000358431|KIAA1671	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	588.3826904296875	2	588.38344	1174.75233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.699	1	18.743	18.243	19.243	0.044048								0	0	0	0.30053	1	352	352		30.504	13.139	1		+		43389	23194	29000	29013	49243	49243					0.17194128221785832
PRRLFLLHEAL	11	Unmodified	_PRRLFLLHEAL_					0	0	0			REV__ENST00000488738.5_1_20:61594023-61594101:+|nuORF	REV__ENST00000488738.5_1_20:61594023-61594101:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6085205078125	3	455.610223	1363.80884	-0.20528	-9.3526E-05	-3.7927	-0.001728	-3.998	-0.0018215	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.7896	1	7384	7384		13.508	0.55046	1	1835000	+		43390	27602	29001	29014	49244	49244					0.14148711267785075
PRRLQELELSL	11	Unmodified	_PRRLQELELSL_					0	0	0			REV__ENSG00000080573|ENST00000264828|COL5A3	REV__ENSG00000080573|ENST00000264828|COL5A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.932373046875	3	451.933143	1352.7776	-1.2099	-0.00054677	0.20074	9.0723E-05	-1.0091	-0.00045605	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.75906	1	10606	10606		20.03	0.7678	1	1176100	+		43391	16806	29002	29015	49245	49245					0.1153209344302013
PRRLQRAKTVK	11	Unmodified	_PRRLQRAKTVK_					0	0	0		ENST00000435009.2_1_13:41341020-41341101:-|nuORF	ENST00000435009.2_1_13:41341020-41341101:-|nuORF	ENST00000435009.2_1_13:41341020-41341101:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.95916748046875	3	451.624755	1351.85244	-1.8035	-0.00081452	1.1089	0.00050082	-0.69461	-0.0003137	451.6251108617355	45.416	1.0919	45.416	44.809	45.901	0					45	26	2	0	0	0	0.78683	1	3374	3374		14.086	0	1	78079			43392	11704	29003	29016	49246	49246					0.19058320764906966
PRRPAAGT	8	Unmodified	_PRRPAAGT_					0	0	0			REV__ENST00000219476.7_1_16:2122324-2122908:+|nuORF	REV__ENST00000219476.7_1_16:2122324-2122908:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.23724365234375	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.87479	1	7044	7044		30.504	6.3009	1	2012200	+		43393	24148	29004	29017	49247	49247					0.04243184505889985
PRRPLLNPGK	10	Unmodified	_PRRPLLNPGK_					0	0	0			REV__ENST00000416823.1_1_22:29702661-29703048:+|nuORF	REV__ENST00000416823.1_1_22:29702661-29703048:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3566284179688	2	574.356557	1146.69856	-1.0357	-0.00059487	-0.061954	-3.5583E-05	-1.0977	-0.00063045	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.85466	1	10709	10709		20.947	1.8434	1	715310	+		43394	26438	29005	29018	49248	49248					0.13107910999406158
PRRPLLNPGK	10	Unmodified	_PRRPLLNPGK_					0	0	0			REV__ENST00000416823.1_1_22:29702661-29703048:+|nuORF	REV__ENST00000416823.1_1_22:29702661-29703048:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3569946289062	2	574.356557	1146.69856	0.86563	0.00049718	-1.9833	-0.0011391	-1.1176	-0.00064191	574.3552739338568	99.781	2.6781	99.932	98.182	100.86	0.15073					107	61	3	0	0	0	0.80179	1	10414	10414		39.253	8.9351	1	245470	+		43395	26438	29005	29018	49249	49249					0.13107910999406158
PRRPLLRE	8	Unmodified	_PRRPLLRE_					0	0	0			REV__ENST00000388747.8_1_9:130688255-130692027:-|nuORF	REV__ENST00000388747.8_1_9:130688255-130692027:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.81982421875	2	518.82235	1035.63015	-0.34633	-0.00017969	-3.8038	-0.0019735	-4.1502	-0.0021532	518.8202184193593	48.507	1.0068	48.976	48.668	49.675	0.46941					65	24	4	0	0	0	0.86288	1	4667	4667		26.796	0	1	3465900	+		43396	25987	29006	29019	49250	49250					0.11375666419553454
PRRPPPSA	8	Unmodified	_PRRPPPSA_					0	0	0		ENST00000593203.1_1_19:10934344-10943016:+|nuORF	ENST00000593203.1_1_19:10934344-10943016:+|nuORF	ENST00000593203.1_1_19:10934344-10943016:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2524108886719	2	439.253769	876.492984	-1.004	-0.000441	-1.0791	-0.00047398	-2.083	-0.00091498	439.2533238623957	90.673	1.937	91.144	90.644	92.581	0.47068					92	46	3	0	0	0	0.89962	1	10777	10777		38.806	1.7777	1	1078300			43397	14306	29007	29020	49251	49251					0.049797575399907146
PRRPQNLTLL	10	Unmodified	_PRRPQNLTLL_					0	0	0		ENST00000481856.1_1_7:4213871-4218865:+|nuORF	ENST00000481856.1_1_7:4213871-4218865:+|nuORF	ENST00000481856.1_1_7:4213871-4218865:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3668823242188	2	604.367121	1206.71969	1.0484	0.00063359	-2.1061	-0.0012728	-1.0577	-0.00063923	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.86763	1	11012	11012		26.693	11.051	1	105850000			43398	12473	29008	29021	49252	49252					0.12459876308275852
PRRPRRHWRRG	11	Unmodified	_PRRPRRHWRRG_					0	0	0			REV__ENST00000527920.5_1_11:65339976-65340141:+|nuORF	REV__ENST00000527920.5_1_11:65339976-65340141:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.9690856933594	3	510.634759	1528.88245	4.1352	0.0021116	-3.0915	-0.0015786	1.0438	0.00053298	510.96644639342924	104.18	2.2061	104.41	103.8	106.01	0.22783					165	53	5	0	0	0	0.81021	1	12679	12679		9.2118	1.1774	1	454800	+		43399	28238	29009	29022	49253	49253					0.13916117273470263
PRRPVWIH	8	Unmodified	_PRRPVWIH_					0	0	0			REV__ENST00000300851.10_3_16:31102364-31102415:-|nuORF	REV__ENST00000300851.10_3_16:31102364-31102415:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.810302734375	2	530.811785	1059.60902	-0.49946	-0.00026512	-2.2692	-0.0012045	-2.7687	-0.0014697	530.8104325855556	85.907	0.94418	86.355	85.945	86.889	0.44736					39	22	2	0	0	0	0.91005	1	10080	10080		42.474	8.3019	1	1053700	+		43400	24755	29010	29023	49254	49254					0.08159701110707829
PRRPVWIH	8	Unmodified	_PRRPVWIH_					0	0	0			REV__ENST00000300851.10_3_16:31102364-31102415:-|nuORF	REV__ENST00000300851.10_3_16:31102364-31102415:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	530.811785	1059.60902	-0.034224	-1.8167E-05	-0.24826	-0.00013178	-0.28249	-0.00014995	531.3142005270126	86.067	0.46973	86.134	85.9	86.37	0.067261	-0.12543	0.0028578	NaN	42.474	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69447	+		43401	24755	29010	29023							0.08159701110707829
PRRPVWIH	8	Unmodified	_PRRPVWIH_					0	0	0			REV__ENST00000300851.10_3_16:31102364-31102415:-|nuORF	REV__ENST00000300851.10_3_16:31102364-31102415:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	530.811785	1059.60902	0.49566	0.0002631	-3.2577	-0.0017292	-2.762	-0.0014661	530.8099389327507	85.846	1.0272	86.289	85.865	86.892	0.44331	0.029944	-0.00033701	NaN	42.474	44	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1102700	+		43402	24755	29010	29023							0.08159701110707829
PRRPVWIH	8	Unmodified	_PRRPVWIH_					0	0	0			REV__ENST00000300851.10_3_16:31102364-31102415:-|nuORF	REV__ENST00000300851.10_3_16:31102364-31102415:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	530.811785	1059.60902	-0.49946	-0.00026512	-2.2692	-0.0012045	-2.7687	-0.0014697	530.8104325855556	85.907	0.94418	86.355	85.945	86.889	0.44736	0.095485	0.00071233	NaN	42.474	39	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1053700	+		43403	24755	29010	29023							0.08159701110707829
PRRQGLVDLVL	11	Unmodified	_PRRQGLVDLVL_					0	0	0			REV__ENSG00000146373|ENST00000521654|RNF217	REV__ENSG00000146373|ENST00000521654|RNF217	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5927734375	3	422.594461	1264.76155	-1.8214	-0.00076972	-2.4208	-0.001023	-4.2423	-0.0017928	422.5933529014654	49.394	1.9735	49.419	48.567	50.541	0.025574					182	52	4	0	0	0	0.74405	1	3817	3817		23.378	1.5975	1	2033600	+		43404	20009	29011	29024	49255	49255					0.13976431996798055
PRRQIWRRRRK	11	Unmodified	_PRRQIWRRRRK_					0	0	0			REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.6273803710938	3	536.669581	1606.98691	-0.69963	-0.00037547	-4.2656	-0.0022892	-4.9652	-0.0026647	536.6673442743105	54.655	0.33576	55.224	54.984	55.32	0.56836					10	7	2	0	0	0	0.1838	1	5565	5565		1.3219	0	1	134830	+		43405	24345	29012	29025	49256	49256					0.20769819030169856
PRRQRLSFK	9	Unmodified	_PRRQRLSFK_					0	0	0			REV__nc|ENSG00000099814|Q9Y4F5-3|CEP170B	REV__nc|ENSG00000099814|Q9Y4F5-3|CEP170B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	593.8226318359375	2	594.359631	1186.70471	-0.066925	-3.9778E-05	2.0893	0.0012418	2.0224	0.001202	594.3607004552802	78.894	0.59432	79.304	79.014	79.609	0.41059					22	13	2	0	0	0	0.20789	1	9011	9011		27.882	0	1	282290	+		43406	17106	29013	29026	49257	49257					0.11882429230922753
PRRRKHPWRRA	11	Unmodified	_PRRRKHPWRRA_					0	0	0		ENST00000264607.8_1_2:239335652-239342206:+|nuORF	ENST00000264607.8_1_2:239335652-239342206:+|nuORF	ENST00000264607.8_1_2:239335652-239342206:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.3097229003906	3	505.97126	1514.89195	5.5316	0.0027988	0.33405	0.00016902	5.8656	0.0029678	505.97146749959285	107.85	0.2757	107.97	107.76	108.04	0.11715					26	8	4	0	0	0	0.80813	1	13189	13189		9.6461	1.2389	1	9407200			43407	9482	29014	29027	49258	49258					0.15509885559004033
PRRRPIMSN	9	Unmodified	_PRRRPIMSN_					0	0	0		ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	ENSG00000090861|ENST00000261772|AARS1	ENSG00000090861|ENST00000261772|AARS1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	563.8212890625	2	563.816741	1125.61893	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.507	1	55.57	55.07	56.07	0.063725								0	0	0	0.28772	1	4650	4650		35.618	2.8059	1				43408	1656	29015	29028	49259	49259					0.0611452105376884
PRRRRERERR	10	Unmodified	_PRRRRERERR_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-3|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-3|WAPL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.96697998046875	3	489.62604	1465.85629	-1.975	-0.00096703	4.3567	0.0021332	2.3817	0.0011661	489.62808612018074	17.531	0.32648	17.531	17.288	17.615	0					25	14	2	0	0	0	0.87292	1	210	210		13.508	0.55046	1	34373	+		43409	29698	29016	29029	49260	49260					0.14199803311339565
PRRRRGPA	8	Unmodified	_PRRRRGPA_					0	0	0			REV__ENST00000513237.5_1_4:106067634-106067973:+|nuORF	REV__ENST00000513237.5_1_4:106067634-106067973:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.256103515625	2	483.296833	964.579114	1.0351	0.00050024	1.2618	0.00060981	2.2968	0.0011101	483.29736576623566	35.821	0.73601	36.262	35.922	36.658	0.44043					30	18	2	0	0	0	0.4196	1	2831	2831		20.482	2.1574	1	275170	+		43410	27993	29017	29030	49261	49261					0.09540762165363503
PRRRRKKRSPR	11	Unmodified	_PRRRRKKRSPR_					0	0	0			REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.9880676269531	3	498.322181	1491.94471	-1.5014	-0.00074816	0.83713	0.00041716	-0.66424	-0.00033101	498.322475094846	50.129	1.802	50.129	48.892	50.694	0					100	42	3	0	0	0	0.81219	1	3997	3997		8.7993	0	1	141070	+		43411	24713	29018	29031	49262	49262					0.21841843621814405
PRRRRKKSPRR	11	Unmodified	_PRRRRKKSPRR_					0	0	0		ENST00000337014.10_2_17:80376485-80377700:+|nuORF	ENST00000337014.10_2_17:80376485-80377700:+|nuORF	ENST00000337014.10_2_17:80376485-80377700:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.3225402832031	3	498.322181	1491.94471	-0.26748	-0.00013329	-0.54016	-0.00026917	-0.80764	-0.00040246	498.3218517146112	49.805	1.7523	49.712	48.767	50.519	-0.093178					89	44	3	0	0	0	0.84494	2	3903	3903;3961		6.3209	0	1	158970			43412	10180	29019	29032	49263;49264	49263					0.21841843621791668
PRRRRPLSAR	10	Unmodified	_PRRRRPLSAR_					0	0	0		ENST00000297258.10_1_8:82192778-82192889:+|nuORF	ENST00000297258.10_1_8:82192778-82192889:+|nuORF	ENST00000297258.10_1_8:82192778-82192889:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.3611450195312	2	632.894703	1263.77485	-0.018739	-1.186E-05	-2.2353	-0.0014147	-2.254	-0.0014266	633.3959585527166	103.16	0.60123	103.16	102.87	103.47	0					18	14	2	0	0	0	0.37624	1	10555	10555		29.15	0	1	1199300			43413	9758	29020	29033	49265	49265					0.15351727619395206
PRRRRPLSAR	10	Unmodified	_PRRRRPLSAR_					0	0	0		ENST00000297258.10_1_8:82192778-82192889:+|nuORF	ENST00000297258.10_1_8:82192778-82192889:+|nuORF	ENST00000297258.10_1_8:82192778-82192889:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.3624877929688	2	632.894703	1263.77485	1.4696	0.0009301	-3.6483	-0.002309	-2.1787	-0.0013789	633.3948977773123	102.91	0.43948	103.09	102.84	103.28	0.18297					16	10	2	0	0	0	0.37624	1	10842	10842		29.15	0	1	778010			43414	9758	29020	29033	49266	49266					0.15351727619395206
PRRRRRRERRL	11	Unmodified	_PRRRRRRERRL_					0	0	0		ENST00000254998.2_1_20:23331374-23334728:+|nuORF	ENST00000254998.2_1_20:23331374-23334728:+|nuORF	ENST00000254998.2_1_20:23331374-23334728:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1651000976562	3	536.340234	1605.99887	-0.10563	-5.6655E-05	-2.9031	-0.0015571	-3.0087	-0.0016137	536.3402084575135	22.104	0.2336	22.152	22.085	22.319	0.048553					17	11	2	0	0	0	0.18318	1	637	637		6.001	5.6888	1	57308			43415	9327	29021	29034	49267	49267					0.22011435773379162
PRRRTRNIVTG	11	Unmodified	_PRRRTRNIVTG_					0	0	0		ENSG00000183978|ENST00000328434|COA3	ENSG00000183978|ENST00000328434|COA3	ENSG00000183978|ENST00000328434|COA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.60107421875	3	442.600609	1324.78	1.7929	0.00079355	-0.91484	-0.00040491	0.87808	0.00038864	442.6001215105029	103.71	1.4704	103.75	103.32	104.79	0.041481					92	35	4	0	0	0	0.73277	1	11248	11248		25.892	5.8612	1	665090			43416	7578	29022	29035	49268	49268					0.13059986691337144
PRRTLRQRRRK	11	Unmodified	_PRRTLRQRRRK_					0	0	0		ENST00000360342.7_1_20:3148478-3154166:-|nuORF	ENST00000360342.7_1_20:3148478-3154166:-|nuORF	ENST00000360342.7_1_20:3148478-3154166:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.3255310058594	3	508.325702	1521.95528	0.79763	0.00040546	-1.9211	-0.00097656	-1.1235	-0.0005711	508.3244767056497	16.652	0.96207	16.627	16.416	17.378	-0.024033					93	43	3	0	0	0	0.88916	1	165	165		3.4087	0.38274	1	503500			43417	10446	29023	29036	49269	49269					0.21517826276249252
PRRVVPVLL	9	Unmodified	_PRRVVPVLL_					0	0	0			REV__ENST00000421092.1_1_20:58517212-58517281:+|nuORF	REV__ENST00000421092.1_1_20:58517212-58517281:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8267211914062	2	524.853119	1047.69168	0.81309	0.00042675	2.0783	0.0010908	2.8914	0.0015176	524.8545848949134	99.176	0.28361	99.333	99.275	99.558	0.15659					11	6	2	0	0	0	0.20789	1	10316	10316		18.324	0.95945	1	134800	+		43418	26495	29024	29037	49270	49270					0.16974598118849826
PRSGHLRPAVL	11	Unmodified	_PRSGHLRPAVL_					0	0	0		ENST00000404875.6_1_9:134396764-134396845:+|nuORF	ENST00000404875.6_1_9:134396764-134396845:+|nuORF	ENST00000404875.6_1_9:134396764-134396845:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.8568725585938	2	601.859464	1201.70437	-0.24099	-0.00014504	-2.6912	-0.0016197	-2.9322	-0.0017648	601.8577844533773	103.4	2.3202	103.45	103.07	105.39	0.041481					122	55	4	0	0	0	0.69995	1	11296	11296		31.53	4.4825	1	1412200			43419	11260	29025	29038	49271	49271					0.11159009511061413
PRSGHLRPAVL	11	Unmodified	_PRSGHLRPAVL_					0	0	0		ENST00000404875.6_1_9:134396764-134396845:+|nuORF	ENST00000404875.6_1_9:134396764-134396845:+|nuORF	ENST00000404875.6_1_9:134396764-134396845:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.857421875	2	601.859464	1201.70437	1.0107	0.00060827	-3.917	-0.0023575	-2.9064	-0.0017492	601.8569689467788	103.23	2.1882	103.41	103.08	105.27	0.18297					123	54	4	0	0	0	0.61369	1	10995	10995		42.864	6.4175	1	2928900			43420	11260	29025	29038	49272	49272					0.11159009511061413
PRSGLIVSLTK	11	Unmodified	_PRSGLIVSLTK_					0	0	0			REV__ENST00000341426.9_1_1:1682922-1683198:-|nuORF	REV__ENST00000341426.9_1_1:1682922-1683198:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.8650512695312	2	585.86388	1169.71321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.444	1	26.104	25.604	26.604	-0.34035								0	0	0	0.56276	1	1461	1461		18.262	0.79408	1		+		43421	25261	29026	29039	49273	49273					0.1351393835689123
PRSGSDNH	8	Unmodified	_PRSGSDNH_					0	0	0		ENST00000569150.1_1_16:25251139-25264321:-|nuORF	ENST00000569150.1_1_16:25251139-25264321:-|nuORF	ENST00000569150.1_1_16:25251139-25264321:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.1981201171875	2	435.196648	868.378742	2.3747	0.0010334	-2.1014	-0.00091453	0.27326	0.00011892	435.195585607861	100.17	1.1497	100.52	100.11	101.26	0.34591					48	28	3	0	0	0	0.89494	1	12148	12148		37.159	9.2769	1	600290			43422	13976	29027	29040	49274	49274					-0.06071177012768203
PRSGSVDQSE	10	Unmodified	_PRSGSVDQSE_					0	0	0			REV__ENSG00000111276|ENST00000228872|CDKN1B	REV__ENSG00000111276|ENST00000228872|CDKN1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2407836914062	2	531.246535	1060.47852	0.6178	0.00032821	-2.2556	-0.0011983	-1.6378	-0.00087006	531.2445998568176	51.473	0.74278	52.14	51.693	52.436	0.6673					39	17	3	0	0	0	0.38353	1	5153	5153		65.465	8.7443	1	816820	+		43423	17860	29028	29041	49275	49275					-0.049304041894629336
PRSGSVDQSE	10	Unmodified	_PRSGSVDQSE_					0	0	0			REV__ENSG00000111276|ENST00000228872|CDKN1B	REV__ENSG00000111276|ENST00000228872|CDKN1B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	531.246535	1060.47852	0.44676	0.00023734	2.8912	0.001536	3.338	0.0017733	531.2478201835319	51.595	0.8789	52.03	51.534	52.413	0.43505	-0.055047	0.0011392	NaN	65.465	35	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	806000	+		43424	17860	29028	29041							-0.049304041894629336
PRSGSVDQSE	10	Unmodified	_PRSGSVDQSE_					0	0	0			REV__ENSG00000111276|ENST00000228872|CDKN1B	REV__ENSG00000111276|ENST00000228872|CDKN1B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	531.246535	1060.47852	0.6178	0.00032821	-2.2556	-0.0011983	-1.6378	-0.00087006	531.2445998568176	51.473	0.74278	52.14	51.693	52.436	0.6673	0.055047	-0.0043293	NaN	65.465	39	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	816820	+		43425	17860	29028	29041							-0.049304041894629336
PRSKHLTG	8	Unmodified	_PRSKHLTG_					0	0	0		ENSG00000212122|ENST00000390666|TSSK1B	ENSG00000212122|ENST00000390666|TSSK1B	ENSG00000212122|ENST00000390666|TSSK1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.25848388671875	2	448.259051	894.503549	1.4362	0.00064381	-1.3421	-0.00060159	0.09419	4.2221E-05	448.25829457253	89.934	3.412	89.982	87.811	91.223	0.048157					180	81	5	0	0	0	0.86677	1	9350	9350		27.882	2.4321	1	2959200			43426	8567	29029	29042	49276	49276					0.05207740194418875
PRSPFALRPLR	11	Unmodified	_PRSPFALRPLR_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677917480469	3	437.266568	1308.77787	-0.040504	-1.7711E-05	2.987	0.0013061	2.9465	0.0012884	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.75457	1	4251	4251		21.032	1.7696	1	2735300			43427	4956	29030	29043	49277	49277					0.13583557953552372
PRSPFALRPLR	11	Unmodified	_PRSPFALRPLR_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677917480469	3	437.266568	1308.77787	-0.097307	-4.2549E-05	2.9069	0.0012711	2.8096	0.0012285	437.26771910027475	53.737	1.8842	53.732	52.971	54.855	-0.0053673					190	57	5	0	0	0	0.75457	3	4746	4698;4746;4755		21.032	3.0219	1	2126600			43428	4956	29030	29043	49278;49279;49280	49279					0.13583557953552372
PRSPFALRPLR	11	Unmodified	_PRSPFALRPLR_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2677001953125	3	437.266568	1308.77787	-1.5693	-0.00068621	4.378	0.0019144	2.8087	0.0012282	437.2683683670783	53.718	2.085	53.765	52.872	54.957	0.047806					225	71	5	0	0	0	0.75779	1	4403	4403		20.315	2.847	1	2544700			43429	4956	29030	29043	49281	49281					0.13583557953552372
PRSPFALRPLR	11	Unmodified	_PRSPFALRPLR_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26806640625	3	437.266568	1308.77787	0.28665	0.00012534	2.7276	0.0011927	3.0143	0.001318	437.2676689275105	50.631	1.3868	50.681	50.015	51.402	0.049896					192	41	5	0	0	0	0.75457	1	4048	4048		21.032	1.7696	1	2963500			43430	4956	29030	29043	49282	49282					0.13583557953552372
PRSPIPTL	8	Unmodified	_PRSPIPTL_					0	0	0			REV__nc|ENSG00000145103|Q86SU0-5|ILDR1	REV__nc|ENSG00000145103|Q86SU0-5|ILDR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.7664794921875	2	440.766178	879.517802	0.20273	8.9357E-05	-0.61968	-0.00027313	-0.41695	-0.00018378	440.76612269748716	18.185	0.78542	17.708	17.198	17.983	-0.47694					39	16	4	0	0	0	0.92973	1	333	333		50.025	5.4935	1	160700	+		43431	19926	29031	29044	49283	49283					0.07322392622711504
PRSPTKKSD	9	Unmodified	_PRSPTKKSD_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST;REV__ENST00000466429.5_1_6:56323805-56328761:-|nuORF	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.2796325683594	2	508.28018	1014.54581	-0.055639	-2.828E-05	0.18106	9.2031E-05	0.12542	6.3751E-05	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.6204	1	9112	9112		45.972	5.1941	1	1918800	+		43432	20278;27129	29032	29045	49284	49284					0.03911670812135526
PRSQEKNEQV	10	Unmodified	_PRSQEKNEQV_					0	0	0			REV__ENSG00000166415|ENST00000360509|WDR72	REV__ENSG00000166415|ENST00000360509|WDR72	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	607.81103515625	2	607.809833	1213.60511	-0.97079	-0.00059005	4.1804	0.0025409	3.2096	0.0019508	607.8122382575644	46.874	0.60622	46.874	46.578	47.184	0					29	15	3	0	0	0	0.85692	1	3539	3539		31.53	0	1	206630	+		43433	21292	29033	29046	49285	49285					0.006855220356555947
PRSQETEQP	9	Unmodified	_PRSQETEQP_					0	0	0			REV__ENSG00000198722|ENST00000635942|UNC13B	REV__ENSG00000198722|ENST00000635942|UNC13B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7968139648438	2	536.256902	1070.49925	-1.2142	-0.00065115	3.9694	0.0021286	2.7552	0.0014775	536.2587814992496	47.513	0.58356	48.436	48.12	48.704	0.92315					21	14	2	0	0	0	0.20789	1	4547	4547		30.318	5.7985	1	228240	+		43434	23365	29034	29047	49286	49286					-0.03317813809803738
PRSQETEQP	9	Unmodified	_PRSQETEQP_					0	0	0			REV__ENSG00000198722|ENST00000635942|UNC13B	REV__ENSG00000198722|ENST00000635942|UNC13B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	536.256902	1070.49925	0.40013	0.00021457	3.244	0.0017396	3.6441	0.0019542	536.2584169020836	48.783	0.43839	48.783	48.574	49.012	0.00016785	0.17385	-0.00061235	NaN	30.318	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39427	+		43435	23365	29034	29047							-0.03317813809803738
PRSQKVLVGLL	11	Unmodified	_PRSQKVLVGLL_					0	0	0			REV__ENSG00000180878|ENST00000316375|C11orf42	REV__ENSG00000180878|ENST00000316375|C11orf42	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.929443359375	3	403.92744	1208.76049	0.5143	0.00020774	4.1381	0.0016715	4.6524	0.0018792	403.92898888715627	45.158	1.872	45.621	44.495	46.367	0.46313					165	45	4	0	0	0	0.7896	1	4112	4112		13.508	1.0751	1	5214800	+		43436	22421	29035	29048	49287	49287					0.1644621762791303
PRSQPLKRLL	10	Unmodified	_PRSQPLKRLL_					0	0	0			REV__ENSG00000106591|ENST00000223324|MRPL32	REV__ENSG00000106591|ENST00000223324|MRPL32	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3661499023438	2	604.385314	1206.75608	-0.48765	-0.00029473	-1.3927	-0.00084174	-1.8804	-0.0011365	604.3831826853224	104.48	0.22089	104.48	104.29	104.51	-0.0035706					6	4	2	0	0	0	0.37624	1	11259	11259		14.865	0	1	87831	+		43437	17618	29036	29049	49288	49288					0.16096753205010828
PRSRERQRRAR	11	Unmodified	_PRSRERQRRAR_					0	0	0			REV__ENST00000378700.7_2_6:19837725-19837965:+|nuORF	REV__ENST00000378700.7_2_6:19837725-19837965:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.95501708984375	3	489.954046	1466.84031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.774	1	62.74	62.24	63.24	-0.033714								0	0	0	0.56276	1	5940	5940		21.78	5.2506	1		+		43438	25904	29037	29050	49289	49289					0.12556097074457284
PRSRERQRRAR	11	Unmodified	_PRSRERQRRAR_					0	0	0			REV__ENST00000378700.7_2_6:19837725-19837965:+|nuORF	REV__ENST00000378700.7_2_6:19837725-19837965:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.95391845703125	3	489.954046	1466.84031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.755	1	62.783	62.283	63.283	0.028133								0	0	0	0.56276	1	5861	5861		21.78	3.2494	1		+		43439	25904	29037	29050	49290	49290					0.12556097074457284
PRSRERQRRAR	11	Unmodified	_PRSRERQRRAR_					0	0	0			REV__ENST00000378700.7_2_6:19837725-19837965:+|nuORF	REV__ENST00000378700.7_2_6:19837725-19837965:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.9540710449219	3	489.954046	1466.84031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.676	1	62.699	62.199	63.199	0.022984								0	0	0	0.56276	1	5468	5468		17.833	0	1		+		43440	25904	29037	29050	49291	49291					0.12556097074457284
PRSRLRQRQL	10	Unmodified	_PRSRLRQRQL_					0	0	0			REV__nc|ENSG00000077150|Q00653-4|NFKB2	REV__nc|ENSG00000077150|Q00653-4|NFKB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2672424316406	3	437.268971	1308.78508	1.089	0.00047619	-3.8083	-0.0016652	-2.7193	-0.001189	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.86698	1	4833	4833		28.081	2.0181	1	2745300	+		43441	16736	29038	29051	49292	49292					0.1430429055399145
PRSRLRQRQL	10	Unmodified	_PRSRLRQRQL_					0	0	0			REV__nc|ENSG00000077150|Q00653-4|NFKB2	REV__nc|ENSG00000077150|Q00653-4|NFKB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2677001953125	3	437.268971	1308.78508	1.1666	0.00051013	-3.9842	-0.0017422	-2.8176	-0.0012321	437.26715109542596	51.001	1.6388	51.753	50.881	52.52	0.75174					116	39	4	0	0	0	0.85834	1	5024	5024		22.58	0.018069	1	3280800	+		43442	16736	29038	29051	49293	49293					0.1430429055399145
PRSSERVP	8	Unmodified	_PRSSERVP_					0	0	0			REV__ENST00000569124.1_1_15:75146292-75165273:-|nuORF	REV__ENST00000569124.1_1_15:75146292-75165273:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2533874511719	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.92457	1	9944	9944		47.916	5.5195	1	1215000	+		43443	28827	29039	29052	49294	49294					0.027191324691898444
PRSTKLKK	8	Unmodified	_PRSTKLKK_					0	0	0		ENSG00000119333|ENST00000372715|DYNC2I2	ENSG00000119333|ENST00000372715|DYNC2I2	ENSG00000119333|ENST00000372715|DYNC2I2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.31353759765625	2	479.313826	956.613099	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.278	1	19.819	19.319	20.319	-0.4591								0	0	0	0.30712	1	625	625		49.442	1.5259	1				43444	3062	29040	29053	49295	49295					0.13305745813738667
PRSTLGKLF	9	Unmodified	_PRSTLGKLF_					0	0	0		nc|ENSG00000159753|Q6F5E8-2|CARMIL2;ENSG00000159753|ENST00000334583|CARMIL2	nc|ENSG00000159753|Q6F5E8-2|CARMIL2	nc|ENSG00000159753|Q6F5E8-2|CARMIL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80389404296875	2	509.805834	1017.59712	-0.93407	-0.00047619	-3.0736	-0.0015669	-4.0077	-0.0020431	509.8042014095356	84.682	2.4835	84.682	83.134	85.618	0					128	59	3	0	0	0	0.76255	1	7955	7955		35.618	2.8059	1	609880			43445	5546	29041	29054	49296	49296					0.08902039576855714
PRSVSLTLH	9	Unmodified	_PRSVSLTLH_					0	0	0			REV__ENSG00000131435|ENST00000253754|PDLIM4	REV__ENSG00000131435|ENST00000253754|PDLIM4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.6827087402344	2	505.293091	1008.57163	1.2641	0.00063874	-3.8499	-0.0019453	-2.5858	-0.0013066	505.2909288097253	96.927	1.3913	97.332	96.969	98.361	0.40498					71	33	3	0	0	0	0.20789	1	11761	11761		40.778	0	1	624530	+		43446	18952	29042	29055	49297	49297					0.06768565054414921
PRTAMNKF	8	Unmodified	_PRTAMNKF_					0	0	0			REV__ENST00000490639.5_1_3:148895590-148939579:-|nuORF	REV__ENST00000490639.5_1_3:148895590-148939579:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.75286865234375	2	482.755287	963.496021	-0.53192	-0.00025679	-4.0039	-0.0019329	-4.5359	-0.0021897	482.7532217618567	76.334	0.68707	76.902	76.474	77.162	0.56836					41	18	3	0	0	0	0.89962	1	8684	8684		38.806	7.2763	1	757670	+	+	43447	15967	29043	29056	49298	49298					0.012812646024940477
PRTGKQIN	8	Unmodified	_PRTGKQIN_					0	0	0		ENST00000467220.1_1_7:158683991-158695375:+|nuORF	ENST00000467220.1_1_7:158683991-158695375:+|nuORF	ENST00000467220.1_1_7:158683991-158695375:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2632141113281	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.87064	1	9781	9781		29.15	4.9468	1	4402400			43448	12153	29044	29057	49299	49299					0.05435722848858404
PRTGREPGLQ	10	Unmodified	_PRTGREPGLQ_					0	0	0		ENST00000578849.1_1_17:8192409-8192553:+|nuORF	ENST00000578849.1_1_17:8192409-8192553:+|nuORF	ENST00000578849.1_1_17:8192409-8192553:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.8058471679688	2	555.804354	1109.59415	-0.44432	-0.00024695	3.6194	0.0020117	3.175	0.0017647	555.8063523892554	59.451	1.0465	59.483	59.019	60.065	0.032825					57	25	3	0	0	0	0.6116	1	5461	5461		49.442	5.0644	1	387260			43449	14081	29045	29058	49300	49300					0.043741644520423506
PRTKPEKELK	10	Unmodified	_PRTKPEKELK_					0	0	0			REV__nc|ENSG00000163673|Q9C098|DCLK3	REV__nc|ENSG00000163673|Q9C098|DCLK3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.9307556152344	3	409.24695	1224.71902	1.024	0.00041908	4.0338	0.0016508	5.0578	0.0020699	409.2485717697956	27.976	0.9158	27.721	27.368	28.284	-0.25465					42	21	3	0	0	0	0.37624	1	1729	1729		25.126	0	1	127400	+		43450	20956	29046	29059	49301	49301					0.11565036868546485
PRTLPGPGATG	11	Unmodified	_PRTLPGPGATG_					0	0	0		ENST00000464526.1_1_6:31555536-31555698:+|nuORF	ENST00000464526.1_1_6:31555536-31555698:+|nuORF	ENST00000464526.1_1_6:31555536-31555698:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2816162109375	2	512.282723	1022.55089	-0.88857	-0.0004552	-1.7897	-0.00091686	-2.6783	-0.0013721	512.2817341917631	86.454	3.0125	86.454	85.618	88.63	0					129	69	2	0	0	0	0.62614	1	8337	8337		41.427	8.6142	1	265310			43451	12091	29047	29060	49302	49302					0.04051974674769099
PRTLPGPGATG	11	Unmodified	_PRTLPGPGATG_					0	0	0		ENST00000464526.1_1_6:31555536-31555698:+|nuORF	ENST00000464526.1_1_6:31555536-31555698:+|nuORF	ENST00000464526.1_1_6:31555536-31555698:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2810668945312	2	512.282723	1022.55089	-1.5312	-0.00078441	-1.1667	-0.00059769	-2.6979	-0.0013821	512.2820384248688	86.195	3.9563	86.353	85.285	89.241	0.15851					164	92	2	0	0	0	0.68532	1	8489	8489		33.922	1.1092	1	356130			43452	12091	29047	29060	49303	49303					0.04051974674769099
PRTRDPEQL	9	Unmodified	_PRTRDPEQL_					0	0	0			REV__ENSG00000113300|ENST00000261951|CNOT6	REV__ENSG00000113300|ENST00000261951|CNOT6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	556.2935791015625	2	556.296362	1110.57817	0.011991	6.6705E-06	3.4832	0.0019377	3.4952	0.0019444	556.2978409822496	68.82	0.57928	68.853	68.537	69.117	0.033005					38	22	2	0	0	0	0.69624	1	6594	6594		40.778	1.972	1	84639	+		43453	17988	29048	29061	49304	49304					0.027304582151373324
PRTRQLRRAVA	11	Unmodified	_PRTRQLRRAVA_					0	0	0		ENST00000301488.7_1_11:67275745-67276087:-|nuORF	ENST00000301488.7_1_11:67275745-67276087:-|nuORF	ENST00000301488.7_1_11:67275745-67276087:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.9390869140625	3	441.940855	1322.80073	0.44003	0.00019447	-2.9046	-0.0012837	-2.4646	-0.0010892	441.9393914889037	56.404	2.26	56.437	55.731	57.991	0.033184					145	81	3	0	0	0	0.75906	1	5069	5069		20.03	2.8637	1	750870			43454	9806	29049	29062	49305	49305					0.15224577071035128
PRTSKGKPLAM	11	Unmodified	_PRTSKGKPLAM_					0	0	0		ENSG00000152580|ENST00000282466|IGSF10	ENSG00000152580|ENST00000282466|IGSF10	ENSG00000152580|ENST00000282466|IGSF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.3443603515625	2	593.342258	1184.66996	0.89398	0.00053044	2.8743	0.0017055	3.7683	0.0022359	593.3438403936742	103.36	2.3929	103.49	103.05	105.45	0.12621					170	59	5	0	0	0	0.732	1	11005	11005		26.063	2.5407	1	4092800			43455	5185	29050	29063	49306	49306					0.08501425307963473
PRTSSRVLRAS	11	Unmodified	_PRTSSRVLRAS_					0	0	0		nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L;ENSG00000110427|ENST00000658780|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	615.3578491210938	2	615.357285	1228.70002	-0.11045	-6.7968E-05	0.4525	0.00027845	0.34205	0.00021048	615.3576279299549	104.87	2.2143	104.87	104.31	106.53	0					144	52	4	0	0	0	0.68532	2	10850	10827;10850		33.922	1.9213	1	1478900			43456	2528	29051	29064	49307;49308	49308					0.09481500297511047
PRTSSRVLRAS	11	Unmodified	_PRTSSRVLRAS_					0	0	0		nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L;ENSG00000110427|ENST00000658780|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	615.357177734375	2	615.357285	1228.70002	3.0577	0.0018815	-2.8693	-0.0017657	0.18832	0.00011588	615.3555264925384	104.67	2.1648	104.63	104.19	106.35	-0.04039					150	51	4	0	0	0	0.69931	2	11519	11484;11519		31.634	5.0316	1	2045600			43457	2528	29051	29064	49309;49310	49310					0.09481500297511047
PRTSSRVLRAS	11	Unmodified	_PRTSSRVLRAS_					0	0	0		nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L;ENSG00000110427|ENST00000658780|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	615.3576049804688	2	615.357285	1228.70002	0.40765	0.00025085	-0.18679	-0.00011494	0.22086	0.00013591	615.3571997592003	104.58	1.8595	104.62	104.13	105.99	0.039864					128	44	4	0	0	0	0.34641	5	11390	11378;11390;11402;11414;11426		63.534	20.67	1	2014000			43458	2528	29051	29064	49311;49312;49313;49314;49315	49312					0.09481500297511047
PRTSSRVLRAS	11	Unmodified	_PRTSSRVLRAS_					0	0	0		nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L;ENSG00000110427|ENST00000658780|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.3574829101562	2	615.357285	1228.70002	1.2106	0.00074497	-0.78758	-0.00048465	0.42304	0.00026032	615.3568978915573	104.33	3.2029	104.5	103.73	106.93	0.17096					209	79	4	0	0	0	0.60687	4	11096	11056;11096;11109;11133		43.651	14.481	1	3137500			43459	2528	29051	29064	49316;49317;49318;49319	49317					0.09481500297511047
PRTSSRVLRAS	11	Unmodified	_PRTSSRVLRAS_					0	0	0		nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L;ENSG00000110427|ENST00000658780|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	615.3576049804688	2	615.357285	1228.70002	0.91539	0.00056329	-0.77086	-0.00047435	0.14453	8.894E-05	615.356833413619	104.5	2.6486	104.62	104.11	106.76	0.11684					178	65	4	0	0	0	0.68532	2	11083	11060;11083		33.922	2.5281	1	3488600			43460	2528	29051	29064	49320;49321	49321					0.09481500297511047
PRTSSRVLRAS	11	Unmodified	_PRTSSRVLRAS_					0	0	0		nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L;ENSG00000110427|ENST00000658780|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.3579711914062	2	615.357285	1228.70002	-1.2393	-0.00076262	1.6001	0.00098463	0.36078	0.00022201	615.3583728067321	104.45	3.3275	104.55	104.1	107.43	0.093857					191	81	4	0	0	0	0.68532	2	11067	11031;11067		33.922	9.4024	1	3359300			43461	2528	29051	29064	49322;49323	49323					0.09481500297511047
PRVAEARLRL	10	Unmodified	_PRVAEARLRL_					0	0	0			REV__nc|ENSG00000168763|Q8NE01-2|CNNM3	REV__nc|ENSG00000168763|Q8NE01-2|CNNM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	591.3612060546875	2	590.867289	1179.72002	3.2055	0.001894	-4.0778	-0.0024095	-0.87234	-0.00051544	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.86218	1	12780	12780		32.812	2.3088	1	6398400	+		43462	21518	29052	29065	49324	49324					0.13735296028107769
PRVASKKN	8	Unmodified	_PRVASKKN_					0	0	0			REV__nc|ENSG00000185787|Q9UBU8|MORF4L1	REV__nc|ENSG00000185787|Q9UBU8|MORF4L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2744445800781	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.8347	1	10165	10165		23.042	2.5607	1	51820000	+		43463	30101	29053	29066	49325	49325					0.08152313228515595
PRVASKKN	8	Unmodified	_PRVASKKN_					0	0	0			REV__nc|ENSG00000185787|Q9UBU8|MORF4L1	REV__nc|ENSG00000185787|Q9UBU8|MORF4L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2742004394531	2	450.274701	898.534849	0.70497	0.00031743	-0.5445	-0.00024518	0.16047	7.2255E-05	450.274392035395	95.119	1.9705	95.282	94.908	96.878	0.16307					118	46	3	0	0	0	0.82658	1	9827	9827		21.96	2.5999	1	967700	+		43464	30101	29053	29066	49326	49326					0.08152313228515595
PRVASKKN	8	Unmodified	_PRVASKKN_					0	0	0			REV__nc|ENSG00000185787|Q9UBU8|MORF4L1	REV__nc|ENSG00000185787|Q9UBU8|MORF4L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2737121582031	2	450.274701	898.534849	-1.7763	-0.00079983	1.9054	0.00085797	0.12912	5.8138E-05	450.2754829150514	95.155	2.0569	95.357	94.777	96.834	0.20242					114	48	3	0	0	0	0.86677	1	9773	9773		27.882	4.8398	1	856850	+		43465	30101	29053	29066	49327	49327					0.08152313228515595
PRVATSTSL	9	Unmodified	_PRVATSTSL_					0	0	0		ENST00000495994.5_1_1:64971609-64971735:+|nuORF	ENST00000495994.5_1_1:64971609-64971735:+|nuORF	ENST00000495994.5_1_1:64971609-64971735:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2663269042969	2	466.263999	930.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.669	1	36.65	36.15	37.15	-0.018673								0	0	0	0.27974	1	2364	2364		38.806	0.99462	1				43466	12777	29054	29067	49328	49328					0.04540883409140406
PRVATSTSLPL	11	Unmodified	_PRVATSTSLPL_					0	0	0		ENST00000495994.5_1_1:64971609-64971735:+|nuORF	ENST00000495994.5_1_1:64971609-64971735:+|nuORF	ENST00000495994.5_1_1:64971609-64971735:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3308715820312	2	571.332413	1140.65027	0.55864	0.00031917	-3.1127	-0.0017784	-2.554	-0.0014592	571.3306168800059	102.04	2.573	102.24	101.51	104.08	0.19484					133	63	4	0	0	0	0.7434	1	10735	10735		23.523	0.94304	1	4021100			43467	12777	29055	29068	49329	49329					0.08557372568861865
PRVAVRSA	8	Unmodified	_PRVAVRSA_					0	0	0		CON__Q9DCV7;ENSG00000135480|ENST00000331817|KRT7;CON__Q3KNV1;CON__P08729	CON__Q9DCV7	CON__Q9DCV7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.26153564453125	2	428.261594	854.508634	1.4286	0.0006118	-1.267	-0.00054261	0.16155	6.9187E-05	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.85277	1	9532	9532		25.45	0	1	57042000		+	43468	639	29056	29069	49330	49330					0.0755604405703707
PRVAVRSA	8	Unmodified	_PRVAVRSA_					0	0	0		CON__Q9DCV7;ENSG00000135480|ENST00000331817|KRT7;CON__Q3KNV1;CON__P08729	CON__Q9DCV7	CON__Q9DCV7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2615661621094	2	428.261594	854.508634	-1.6655	-0.00071328	1.873	0.00080211	0.20742	8.8832E-05	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.85277	1	9124	9124		25.45	1.2474	1	44776000		+	43469	639	29056	29069	49331	49331					0.0755604405703707
PRVAVRSA	8	Unmodified	_PRVAVRSA_					0	0	0		CON__Q9DCV7;ENSG00000135480|ENST00000331817|KRT7;CON__Q3KNV1;CON__P08729	CON__Q9DCV7	CON__Q9DCV7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2614440917969	2	428.261594	854.508634	-1.021	-0.00043726	1.2368	0.00052966	0.21577	9.2404E-05	428.26203928148993	90.556	2.3584	91.026	90.524	92.882	0.47068					198	56	5	0	0	0	0.85277	1	10737	10737		25.45	0	1	38446000		+	43470	639	29056	29069	49332	49332					0.0755604405703707
PRVDPNNVI	9	Unmodified	_PRVDPNNVI_					0	0	0			REV__ENSG00000133687|ENST00000539277|TMTC1	REV__ENSG00000133687|ENST00000539277|TMTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2825317382812	2	512.282723	1022.55089	-0.052062	-2.6671E-05	-2.6058	-0.0013349	-2.6579	-0.0013616	512.2812910993212	86.454	3.487	86.521	85.51	88.997	0.067436					149	81	2	0	0	0	0.73802	1	8725	8725		37.812	1.3648	1	329990	+		43471	19090	29057	29070	49333	49333					0.0405197467475773
PRVELQIKEAV	11	Unmodified	_PRVELQIKEAV_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.385009765625	2	641.379894	1280.74524	2.7089	0.0017374	4.3987	0.0028213	7.1076	0.0045587	641.3824552667398	102.77	1.4212	102.72	102.34	103.76	-0.046997					84	34	4	0	0	0	0.66009	1	11249	11249		37.508	3.5865	1	1908400			43472	5333	29058	29071	49334	49334					0.11609306040054435
PRVELQIKEAV	11	Unmodified	_PRVELQIKEAV_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.3841552734375	2	641.379894	1280.74524	4.2845	0.002748	2.1231	0.0013617	6.4076	0.0041097	641.38089216233	102.49	0.67636	102.79	102.3	102.98	0.29865					46	15	4	0	0	0	0.48313	1	12497	12497		53.089	1.5612	1	2385400			43473	5333	29058	29071	49335	49335					0.11609306040054435
PRVGLLFRLK	10	Unmodified	_PRVGLLFRLK_					0	0	0		nc|ENSG00000111802|O95551-2|TDP2	nc|ENSG00000111802|O95551-2|TDP2	nc|ENSG00000111802|O95551-2|TDP2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.8095703125	2	599.892775	1197.771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.99	1	114.92	114.42	115.42	-0.072342								0	0	0	0.45132	1	12416	12416		10.265	0.5596	1				43474	14848	29059	29072	49336	49336					0.18002245072966616
PRVGRHTRQH	10	Unmodified	_PRVGRHTRQH_					0	0	0			REV__ENSG00000122386|ENST00000219091|ZNF205	REV__ENSG00000122386|ENST00000219091|ZNF205	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3446655273438	2	622.347586	1242.68062	-0.17246	-0.00010733	-1.0237	-0.00063707	-1.1961	-0.0007444	622.3467162320231	96.253	1.81	96.253	95.614	97.424	0					80	41	2	0	0	0	0.86348	1	9656	9656		31.53	2.3598	1	250670	+		43475	18493	29060	29073	49337	49337					0.06898588797253069
PRVKATKAYYL	11	Unmodified	_PRVKATKAYYL_					0	0	0			REV__ENST00000489613.1_1_2:234294779-234297133:+|nuORF	REV__ENST00000489613.1_1_2:234294779-234297133:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2573547363281	3	437.259079	1308.75541	-1.4866	-0.00065002	-2.4798	-0.0010843	-3.9663	-0.0017343	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.72374	1	10331	10331		27.644	3.4121	1	981430	+		43476	27621	29061	29074	49338	49338					0.1133791376530553
PRVKHPDWL	9	Unmodified	_PRVKHPDWL_					0	0	0		ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF	ENSG00000177084|ENST00000320574|POLE	ENSG00000177084|ENST00000320574|POLE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3193969726562	2	574.322183	1146.62981	-1.3729	-0.0007885	-3.3216	-0.0019077	-4.6945	-0.0026962	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.72402	1	9584	9584		38.806	14.287	1	1586900			43477	7117	29062	29075	49339	49339					0.06236246699700132
PRVKKLYPQL	10	Unmodified	_PRVKKLYPQL_					0	0	0		ENST00000587974.1_1_18:43487913-43547205:-|nuORF;nc|ENSG00000152223|Q9HCE0-2|EPG5;ENSG00000152223|ENST00000282041|EPG5	ENST00000587974.1_1_18:43487913-43547205:-|nuORF	ENST00000587974.1_1_18:43487913-43547205:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3936157226562	2	621.390065	1240.76558	1.3	0.00080781	2.97	0.0018456	4.2701	0.0026534	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.85694	1	11200	11200		21.96	4.4919	1	23079000			43478	5163	29063	29076	49340	49340					0.15482521490503132
PRVLLLLPKL	10	Unmodified	_PRVLLLLPKL_					0	0	0		chr7:64336982-64337779|57|13.09|0.51|4.69|+|1|ZNF736,None|1	chr7:64336982-64337779|57|13.09|0.51|4.69|+|1|ZNF736,None|1	chr7:64336982-64337779|57|13.09|0.51|4.69|+|1|ZNF736,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.9090576171875	2	581.407727	1160.8009	0.88211	0.00051286	-4.1601	-0.0024187	-3.278	-0.0019058	581.4051889968249	108.93	0.52326	109.01	108.72	109.24	0.078552					47	23	3	0	0	0	0.91594	1	11706	11706		6.7355	3.3255	1	2018000			43479	505	29064	29077	49341	49341					0.2269318401831697
PRVLRGPATKS	11	Unmodified	_PRVLRGPATKS_					0	0	0			REV__ENST00000552679.6_1_12:113266123-113285539:+|nuORF	REV__ENST00000552679.6_1_12:113266123-113285539:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	591.3597412109375	2	591.359296	1180.70404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.08	1	107.04	106.54	107.54	-0.034409								0	0	0	0.56276	1	11640	11640		20.837	0.84038	1		+		43480	28631	29065	29078	49342	49342					0.12091589791225488
PRVLRITKI	9	Unmodified	_PRVLRITKI_					0	0	0			REV__ENSG00000165650|ENST00000334464|PDZD8	REV__ENSG00000165650|ENST00000334464|PDZD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.3728637695312	2	548.371675	1094.7288	1.0714	0.00058752	2.9821	0.0016353	4.0535	0.0022228	548.3731723776325	34.329	0.84913	34.634	34.324	35.173	0.30494					51	20	3	0	0	0	0.7932	1	2567	2567		20.947	2.6225	1	548470	+		43481	21201	29066	29079	49343	49343					0.18522269664572377
PRVLRITKI	9	Unmodified	_PRVLRITKI_					0	0	0			REV__ENSG00000165650|ENST00000334464|PDZD8	REV__ENSG00000165650|ENST00000334464|PDZD8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	548.371675	1094.7288	-0.098221	-5.3861E-05	3.9817	0.0021834	3.8835	0.0021296	548.3736153028802	34.342	0.76804	34.552	34.359	35.127	0.21003	-0.041312	0.00072544	NaN	20.947	45	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	308090	+		43482	21201	29066	29079							0.18522269664572377
PRVLSTKEVKR	11	Unmodified	_PRVLSTKEVKR_					0	0	0		ENST00000276440.11_1_8:25270087-25270417:+|nuORF	ENST00000276440.11_1_8:25270087-25270417:+|nuORF	ENST00000276440.11_1_8:25270087-25270417:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2727966308594	3	438.273499	1311.79867	-0.96199	-0.00042161	-0.26536	-0.0001163	-1.2273	-0.00053791	438.2732841967114	107.57	0.99143	107.57	106.84	107.83	0					91	23	5	0	0	0	0.72892	1	11150	11150		26.75	2.5179	1	3871200			43483	9603	29067	29080	49344	49344					0.15524103542520606
PRVNLQKLTVN	11	Unmodified	_PRVNLQKLTVN_					0	0	0			REV__ENST00000434012.2_1_4:121263589-121263781:+|nuORF	REV__ENST00000434012.2_1_4:121263589-121263781:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.3849487304688	2	641.385511	1280.75647	-0.056243	-3.6073E-05	-1.4846	-0.00095223	-1.5409	-0.00098831	641.38426478806	102.85	1.2882	102.86	102.47	103.76	0.0082016					78	31	4	0	0	0	0.75164	1	11018	11018		21.686	0	1	1910600	+		43484	26660	29068	29081	49345	49345					0.12732128134166487
PRVPLPRRE	9	Unmodified	_PRVPLPRRE_					0	0	0		ENSG00000156030|ENST00000423556|MIDEAS;nc|ENSG00000156030|Q6PJG2|MIDEAS	ENSG00000156030|ENST00000423556|MIDEAS	ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3402709960938	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.7932	1	11299	11299		23.042	2.0956	1	81463000			43485	5359	29069	29082	49346	49346					0.11267337965318802
PRVPPARRYTI	11	Unmodified	_PRVPPARRYTI_					0	0	0			REV__nc|ENSG00000137145|Q5VZ89-5|DENND4C	REV__nc|ENSG00000137145|Q5VZ89-5|DENND4C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.60125732421875	3	442.598206	1324.77279	2.7379	0.0012118	3.7929	0.0016787	6.5307	0.0028905	442.5997945412009	103.8	1.4388	103.76	103.37	104.81	-0.043755					90	34	4	0	0	0	0.78083	1	11424	11424		15.337	0.55867	1	569000	+		43486	19364	29070	29083	49347	49347					0.12339254090943541
PRVPRACPGRL	11	Unmodified	_PRVPRACPGRL_					0	0	0			REV__ENST00000460874.6_1_9:21802692-21815438:+|nuORF	REV__ENST00000460874.6_1_9:21802692-21815438:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3544921875	2	611.353491	1220.69243	1.8406	0.0011253	3.1887	0.0019494	5.0293	0.0030747	611.3554755611618	95.715	4.0888	96.135	95.146	99.235	0.42051					346	99	4	0	0	0	0.70737	1	11375	11375		30.318	1.1477	1	11372000	+		43487	27016	29071	29084	49348	49348					0.09091069496253112
PRVQHGLRSA	10	Unmodified	_PRVQHGLRSA_					0	0	0		ENST00000397299.8_1_15:42129277-42129514:+|nuORF	ENST00000397299.8_1_15:42129277-42129514:+|nuORF	ENST00000397299.8_1_15:42129277-42129514:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8202514648438	2	560.820338	1119.62612	1.394	0.00078178	-2.3679	-0.001328	-0.97394	-0.00054621	560.8189408405052	92.38	3.0704	92.425	91.102	94.172	0.045456					218	72	4	0	0	0	0.77314	1	9627	9627		40.778	9.2484	1	723720			43488	11143	29072	29085	49349	49349					0.07109576925859074
PRVRGASLLPH	11	Unmodified	_PRVRGASLLPH_					0	0	0		ENST00000250113.11_1_17:7494887-7494995:-|nuORF	ENST00000250113.11_1_17:7494887-7494995:-|nuORF	ENST00000250113.11_1_17:7494887-7494995:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.8583374023438	2	601.859464	1201.70437	-0.24099	-0.00014504	-2.6912	-0.0016197	-2.9322	-0.0017648	601.8577844533773	103.4	2.3202	103.45	103.07	105.39	0.041481					122	55	4	0	0	0	0.69995	1	11228	11228		31.53	8.9502	1	1412200			43489	9292	29073	29086	49350	49350					0.1115900951108415
PRVRKQTKHY	10	Unmodified	_PRVRKQTKHY_					0	0	0		ENSG00000124177|ENST00000373233|CHD6	ENSG00000124177|ENST00000373233|CHD6	ENSG00000124177|ENST00000373233|CHD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2577819824219	3	438.258072	1311.75239	-0.33086	-0.000145	-0.50447	-0.00022109	-0.83533	-0.00036609	438.2577888562839	29.898	1.7233	29.855	29.533	31.256	-0.043093					114	42	4	0	0	0	0.85441	1	1654	1654		20.837	0	1	610700			43490	3311	29074	29087	49351	49351					0.10898083431152372
PRVRVGNEY	9	Unmodified	_PRVRVGNEY_					0	0	0		ENSG00000078814|ENST00000262873|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.2946166992188	2	545.293622	1088.57269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.25	1	39.338	38.838	39.838	0.088375								0	0	0	0.28772	1	2392	2392		35.618	7.5368	1				43491	1407	29075	29088	49352	49352					0.03194779423347427
PRVSPGPP	8	Unmodified	_PRVSPGPP_					0	0	0			REV__ENST00000590096.1_1_19:10654706-10657792:+|nuORF	REV__ENST00000590096.1_1_19:10654706-10657792:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.7309265136719	2	403.729595	805.444637	2.7323	0.0011031	-0.40392	-0.00016307	2.3284	0.00094003	403.72925673314853	99.693	1.4907	100.03	99.108	100.6	0.33294					77	37	3	0	0	0	0.81548	1	12067	12067		20.482	1.1219	1	609450	+		43492	29172	29076	29089	49353	49353					0.03413263900097263
PRVSVLCLPPL	11	Unmodified	_PRVSVLCLPPL_					0	0	0		ENST00000285735.6_2_1:113248424-113248541:-|nuORF	ENST00000285735.6_2_1:113248424-113248541:-|nuORF	ENST00000285735.6_2_1:113248424-113248541:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.3582763671875	2	597.357376	1192.7002	-1.2979	-0.00077532	2.4252	0.0014487	1.1272	0.00067336	597.3583970456502	100.18	2.7493	100.35	98.666	101.42	0.17199					156	64	4	0	0	0	0.70737	1	10446	10446		30.318	5.7985	1	2737400			43493	9651	29077	29090	49354	49354					0.11155783973163125
PRVTCRRKRYF	11	Unmodified	_PRVTCRRKRYF_					0	0	0		chr10:12235330-12237144|35|17.6|0.69|4.66|+|1|TE_info:MER117,MER117_dup2411,hAT-Charlie,DNA,donor,+,12235216,12235330|None,CDC123|2	chr10:12235330-12237144|35|17.6|0.69|4.66|+|1|TE_info:MER117,MER117_dup2411,hAT-Charlie,DNA,donor,+,12235216,12235330|None,CDC123|2	chr10:12235330-12237144|35|17.6|0.69|4.66|+|1|TE_info:MER117,MER117_dup2411,hAT-Charlie,DNA,donor,+,12235216,12235330|None,CDC123|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7801208496094	3	494.613861	1480.81975	-0.76701	-0.00037937	0.21611	0.00010689	-0.5509	-0.00027248	494.6139387167573	86.214	0.61092	86.662	86.319	86.93	0.44736					21	14	2	0	0	0	0.17784	1	10118	10118		22.562	4.7284	1	127980			43494	65	29078	29091	49355	49355					0.09857790370415387
PRVVARHSRAM	11	Unmodified	_PRVVARHSRAM_					0	0	0		ENST00000477757.5_1_10:97028616-97050708:-|nuORF	ENST00000477757.5_1_10:97028616-97050708:-|nuORF	ENST00000477757.5_1_10:97028616-97050708:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.358642578125	2	640.361847	1278.70914	-1.1585	-0.00074183	-3.5756	-0.0022897	-4.734	-0.0030315	640.3594398218631	99.341	2.5092	99.527	98.68	101.19	0.18581					187	58	4	0	0	0	0.68532	1	10270	10270		33.922	2.3918	1	585260			43495	12360	29079	29092	49356	49356					0.0809357038217513
PRVVPTRLLL	10	Unmodified	_PRVVPTRLLL_					0	0	0			REV__nc|ENSG00000204370|O14521-3|SDHD	REV__nc|ENSG00000204370|O14521-3|SDHD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3534545898438	2	582.384783	1162.75501	-1.3468	-0.00078434	1.9176	0.0011168	0.57083	0.00033244	582.3841859290145	104.02	0.33335	104.11	103.98	104.32	0.093857					10	7	2	0	0	0	0.37624	1	10953	10953		9.7057	0	1	27116	+		43496	30160	29080	29093	49357	49357					0.18014538836087013
PRVWEAVHHL	10	Unmodified	_PRVWEAVHHL_					0	0	0		ENST00000375743.8_1_1:16270013-16270337:-|nuORF	ENST00000375743.8_1_1:16270013-16270337:-|nuORF	ENST00000375743.8_1_1:16270013-16270337:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3357543945312	2	622.338364	1242.66217	-0.27733	-0.0001726	-3.0052	-0.0018703	-3.2825	-0.0020428	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.86201	1	12096	12096		24.203	1.1603	1	419280			43497	10805	29081	29094	49358	49358					0.050550341027019385
PRWDKTERKLL	11	Unmodified	_PRWDKTERKLL_					0	0	0			REV__ENST00000316084.9_1_X:71492477-71493137:-|nuORF	REV__ENST00000316084.9_1_X:71492477-71493137:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.28277587890625	3	481.280654	1440.82013	2.8229	0.0013586	4.1588	0.0020016	6.9817	0.0033602	481.2820387831268	102.84	2.0906	102.8	102.18	104.27	-0.047005					125	50	4	0	0	0	0.75457	1	11231	11231		21.032	3.1991	1	829310	+		43498	24950	29082	29095	49359	49359					0.1173548857127571
PRWLGLVGRVV	11	Unmodified	_PRWLGLVGRVV_					0	0	0			REV__ENST00000492809.5_1_3:51992079-51994784:-|nuORF	REV__ENST00000492809.5_1_3:51992079-51994784:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.891845703125	2	626.387857	1250.76116	1.3747	0.00086107	-4.0662	-0.002547	-2.6915	-0.0016859	626.8868969487263	110.01	0.86485	110.13	109.81	110.68	0.12289					76	30	3	0	0	0	0.78309	1	11811	11811		14.865	0.72775	1	3484200	+		43499	27680	29083	29096	49360	49360					0.1458105706758488
PRWPRERRRRR	11	Unmodified	_PRWPRERRRRR_					0	0	0			REV__ENST00000278823.6_1_11:62366051-62368981:-|nuORF	REV__ENST00000278823.6_1_11:62366051-62368981:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	541.3126220703125	3	540.989202	1619.94578	-1.7047	-0.00092224	-4.4056	-0.0023834	-6.1104	-0.0033056	540.9865678951958	16.013	0.14899	16.013	15.918	16.067	0					9	6	2	0	0	0	0.81219	1	86	86		8.7993	5.3906	1	36851	+		43500	24598	29084	29097	49361	49361					0.16060057990694077
PRWWRRLHWQR	11	Unmodified	_PRWWRRLHWQR_					0	0	0		ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	559.64404296875	3	559.643031	1675.90726	-0.95105	-0.00053225	3.37	0.001886	2.419	0.0013538	559.6450080482697	37.406	0.73701	37.382	37.082	37.819	-0.023979					51	16	4	0	0	0	0.89761	2	2466	2466;2496		2.8518	2.4804	1	311930			43501	11647	29085	29098	49362;49363	49362					0.09634752356191711
PRWWRRLHWQR	11	Unmodified	_PRWWRRLHWQR_					0	0	0		ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	559.9773559570312	3	559.643031	1675.90726	-0.57707	-0.00032295	3.0483	0.0017059	2.4712	0.001383	559.9790700442095	37.295	0.84157	37.242	36.961	37.802	-0.053555					49	18	4	0	0	0	0.92084	1	2570	2570		1.3219	1.3219	1	339290			43502	11647	29085	29098	49364	49364					0.09634752356191711
PRWWRRLHWQR	11	Unmodified	_PRWWRRLHWQR_					0	0	0		ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	559.6439208984375	3	559.643031	1675.90726	-0.82441	-0.00046138	2.9516	0.0016519	2.1272	0.0011905	559.6446922698374	37.288	0.97337	37.299	36.928	37.901	0.011173					57	21	4	0	0	0	0.88916	2	2469	2469;2494		3.4087	3.0373	1	281950			43503	11647	29085	29098	49365;49366	49365					0.09634752356191711
PRWWRRLHWQR	11	Unmodified	_PRWWRRLHWQR_					0	0	0		ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	559.6448974609375	3	559.643031	1675.90726	0.26953	0.00015084	2.1948	0.0012283	2.4643	0.0013792	559.6441547574325	37.39	0.84743	37.408	36.945	37.792	0.01841					63	22	4	0	0	0	0.88916	1	2174	2174		3.4087	3.0682	1	628660			43504	11647	29085	29098	49367	49367					0.09634752356191711
PRWWRRLHWQR	11	Unmodified	_PRWWRRLHWQR_					0	0	0		ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	559.6446533203125	3	559.643031	1675.90726	0.28767	0.00016099	2.1315	0.0011929	2.4191	0.0013539	559.9786028425922	37.18	0.81733	37.28	36.951	37.769	0.099277					53	24	3	0	0	0	0.89215	2	2107	2096;2107		3.2113	2.8399	1	732540			43505	11647	29085	29098	49368;49369	49369					0.09634752356191711
PRWWRRLHWQR	11	Unmodified	_PRWWRRLHWQR_					0	0	0		ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	559.644287109375	3	559.643031	1675.90726	0.38297	0.00021433	1.9443	0.0010881	2.3273	0.0013024	559.6440596538548	37.281	0.60312	37.221	36.96	37.564	-0.060333					56	16	5	0	0	0	0.85439	2	2115	2115;2136		5.6988	4.28	1	685900			43506	11647	29085	29098	49370;49371	49370					0.09634752356191711
PRWWRRLHWQR	11	Unmodified	_PRWWRRLHWQR_					0	0	0		ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.6442260742188	3	559.643031	1675.90726	1.0219	0.00057187	1.1511	0.0006442	2.1729	0.0012161	559.6437098351835	36.853	0.86442	37.135	36.809	37.674	0.28173					59	20	5	0	0	0	0.89497	2	2919	2919;2931		3.026	1.6072	1	1901800			43507	11647	29085	29098	49372;49373	49372					0.09634752356191711
PRWWRRLHWQR	11	Unmodified	_PRWWRRLHWQR_					0	0	0		ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.6436157226562	3	559.643031	1675.90726	1.2901	0.00072199	0.95367	0.00053372	2.2438	0.0012557	559.6436188345301	36.713	0.82962	37.199	36.874	37.704	0.48581					65	19	5	0	0	0	0.85873	2	2939	2927;2939		5.4129	5.4129	1	2012300			43508	11647	29085	29098	49374;49375	49375					0.09634752356191711
PRYHDKDRK	9	Unmodified	_PRYHDKDRK_					0	0	0			REV__ENSG00000129292|ENST00000395386|PHF20L1	REV__ENSG00000129292|ENST00000395386|PHF20L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.55267333984375	3	405.551144	1213.6316	0.31154	0.00012634	3.1447	0.0012753	3.4562	0.0014017	405.55242896235654	28.737	3.0603	28.708	27.908	30.968	-0.029207					186	70	5	0	0	0	0.64555	2	1742	1742;1765		43.651	15.569	1	9803100	+		43509	18816	29086	29099	49376;49377	49376					0.033332557176208866
PRYHDKDRK	9	Unmodified	_PRYHDKDRK_					0	0	0			REV__ENSG00000129292|ENST00000395386|PHF20L1	REV__ENSG00000129292|ENST00000395386|PHF20L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.55267333984375	3	405.551144	1213.6316	0.59269	0.00024037	2.8716	0.0011646	3.4643	0.001405	405.5523269463935	28.869	3.2114	28.696	27.713	30.924	-0.17336					183	75	5	0	0	0	0.71772	1	1777	1777		38.754	4.832	1	9724600	+		43510	18816	29086	29099	49378	49378					0.033332557176208866
PSAAALRRA	9	Unmodified	_PSAAALRRA_					0	0	0			REV__ENST00000399332.5_2_14:31675083-31676300:-|nuORF	REV__ENST00000399332.5_2_14:31675083-31676300:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7928771972656	2	456.772326	911.530098	0.1904	8.697E-05	3.3341	0.0015229	3.5245	0.0016099	456.775329818169	37.534	0.13182	37.633	37.574	37.706	0.099277					5	4	2	0	0	0	0.20789	1	2163	2163		19.997	3.5236	1	21789	+		43511	22506	29087	29100	49379	49379					0.07079429085740685
PSAAPRLY	8	Unmodified	_PSAAPRLY_					0	0	0			REV__ENSG00000156097|ENST00000527748|GPR61	REV__ENSG00000156097|ENST00000527748|GPR61	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2578125	2	437.742702	873.470852	0.41554	0.0001819	-1.045	-0.00045743	-0.62944	-0.00027553	437.7417068310387	30.84	0.52195	30.844	30.579	31.101	0.0037212					17	11	2	0	0	0	0.4196	1	2073	2073		33.516	3.0119	1	51288	+		43512	20468	29088	29101	49380	49380					0.02905533071566424
PSAFTKLSLH	10	Unmodified	_PSAFTKLSLH_					0	0	0		ENST00000361906.7_1_22:38615713-38615971:-|nuORF	ENST00000361906.7_1_22:38615713-38615971:-|nuORF	ENST00000361906.7_1_22:38615713-38615971:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.80810546875	2	550.808574	1099.60259	-1.5149	-0.00083443	-2.1486	-0.0011835	-3.6635	-0.0020179	550.8072735830477	30.077	0.6332	30.077	29.793	30.426	0					50	19	3	0	0	0	0.8545	1	1341	1341		36.447	2.2742	1	258040			43513	10496	29089	29102	49381	49381					0.05677718368656315
PSAGSRTRRN	10	Unmodified	_PSAGSRTRRN_					0	0	0			REV__nc|ENSG00000144488|Q6ZVH7-2|ESPNL	REV__nc|ENSG00000144488|Q6ZVH7-2|ESPNL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	551.2991333007812	2	551.297227	1100.5799	-1.4835	-0.00081786	3.8764	0.0021371	2.3929	0.0013192	551.299268794571	32.001	0.65455	32.001	31.801	32.456	0					57	24	3	0	0	0	0.33399	1	1573	1573		69.628	0.78148	1	214540	+		43514	19895	29090	29103	49382	49382					0.03363512023770454
PSAGSRTRRN	10	Unmodified	_PSAGSRTRRN_					0	0	0			REV__nc|ENSG00000144488|Q6ZVH7-2|ESPNL	REV__nc|ENSG00000144488|Q6ZVH7-2|ESPNL	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	551.297227	1100.5799	0.13422	7.3997E-05	2.0816	0.0011476	2.2159	0.0012216	551.298560431749	32.042	0.43548	32.101	31.9	32.335	0.058315	0.21274	-0.0012199	NaN	69.628	31	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73829	+		43515	19895	29090	29103							0.03363512023770454
PSALIGSFPA	10	Unmodified	_PSALIGSFPA_					0	0	0		ENST00000530945.1_1_11:65622809-65623088:-|nuORF	ENST00000530945.1_1_11:65622809-65623088:-|nuORF	ENST00000530945.1_1_11:65622809-65623088:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.2635192871094	2	480.263468	958.512382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.569	1	27.569	27.069	28.069	0								0	0	0	0.45132	1	1110	1110		42.396	5.237	1				43516	13350	29091	29104	49383	49383					0.031466690402339736
PSALTSRSWFS	11	Unmodified	_PSALTSRSWFS_					0	0	0		ENST00000335325.8_1_16:75140446-75141757:+|nuORF	ENST00000335325.8_1_16:75140446-75141757:+|nuORF	ENST00000335325.8_1_16:75140446-75141757:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8147583007812	2	619.811845	1237.60914	1.1883	0.00073655	2.7165	0.0016837	3.9048	0.0024202	619.8130616287558	54.182	0.67599	54.238	53.825	54.501	0.055614					33	21	2	0	0	0	0.62914	1	4461	4461		4.6126	0	1	159180			43517	10157	29092	29105	49384	49384					-0.0001638847061258275
PSAPAPRATT	10	Unmodified	_PSAPAPRATT_					0	0	0			REV__ENST00000325870.2_1_9:22446949-22447012:+|nuORF	REV__ENST00000325870.2_1_9:22446949-22447012:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.9297180175781	2	484.761623	967.508694	-0.24949	-0.00012094	-3.0627	-0.0014847	-3.3122	-0.0016056	484.76027732879305	26.386	0.61066	26.348	26.017	26.628	-0.038525					19	12	2	0	0	0	0.37624	1	1215	1215		42.864	12.361	1	29511	+		43518	25066	29093	29106	49385	49385					0.023639992663675002
PSAPVNQPT	9	Unmodified	_PSAPVNQPT_					0	0	0			REV__nc|ENSG00000181827|Q2KHR2-1|RFX7	REV__nc|ENSG00000181827|Q2KHR2-1|RFX7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.7353820800781	2	455.735074	909.455596	0.11172	5.0914E-05	0.074852	3.4113E-05	0.18657	8.5027E-05	455.73489417508915	31.816	0.64461	31.828	31.495	32.14	0.011446					29	15	3	0	0	0	0.78536	1	1765	1765		29.15	2.3535	1	114800	+		43519	22483	29094	29107	49386	49386					-0.0027537851628949284
PSARRRPGARK	11	Unmodified	_PSARRRPGARK_					0	0	0			REV__ENSG00000131873|ENST00000254190|CHSY1	REV__ENSG00000131873|ENST00000254190|CHSY1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.386962890625	2	626.378886	1250.74322	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.67	1	109.74	109.24	110.24	0.068001								0	0	0	0.56276	1	13324	13324		30.318	4.7437	1		+		43520	18975	29095	29108	49387	49387					0.1278773486544651
PSASLLVLI	9	Unmodified	_PSASLLVLI_					0	0	0		ENST00000481424.5_1_7:99214612-99216222:+|nuORF;ENST00000431485.2_3_7:99215826-99216222:+|nuORF	ENST00000481424.5_1_7:99214612-99216222:+|nuORF	ENST00000481424.5_1_7:99214612-99216222:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30133056640625	2	456.791861	911.569169	0.097545	4.4558E-05	2.5944	0.0011851	2.6919	0.0012296	456.7929552103287	47.98	1.1453	47.978	47.558	48.703	-0.002449					69	35	4	0	0	0	0.20789	1	4020	4020		38.806	5.2906	1	249160			43521	12458	29096	29109	49388	49388					0.10984716596760791
PSDFEVIQI	9	Unmodified	_PSDFEVIQI_					0	0	0		ENSG00000140943|ENST00000343411|MBTPS1	ENSG00000140943|ENST00000343411|MBTPS1	ENSG00000140943|ENST00000343411|MBTPS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2713012695312	2	524.27149	1046.52843	0.71347	0.00037405	-1.5574	-0.00081651	-0.84394	-0.00044245	524.2705766270246	76.14	0.90393	76.538	76.199	77.103	0.39823					51	22	3	0	0	0	0.38563	1	8636	8636		58.782	2.3482	1	1523700			43522	4467	29097	29110	49389	49389					0.007023304865015234
PSDLGVIVVI	10	Unmodified	_PSDLGVIVVI_					0	0	0		ENST00000466317.1_1_17:17124591-17124780:-|nuORF	ENST00000466317.1_1_17:17124591-17124780:-|nuORF	ENST00000466317.1_1_17:17124591-17124780:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80291748046875	2	506.307875	1010.6012	0.40486	0.00020498	1.9335	0.00097895	2.3384	0.0011839	506.30888331142467	56.209	0.70053	56.309	55.673	56.373	0.099186					45	29	2	0	0	0	0.37624	1	4693	4693		5.9211	0	1	200050			43523	12130	29098	29111	49390	49390					0.09632084279917308
PSDLVPHVIL	10	Unmodified	_PSDLVPHVIL_					0	0	0			REV__ENSG00000213995|ENST00000680254|NAXD	REV__ENSG00000213995|ENST00000680254|NAXD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3146362304688	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.86763	1	10286	10286		26.693	3.1702	1	4868200	+		43524	23641	29099	29112	49391	49391					0.08222889028479585
PSDMFPAEV	9	Unmodified	_PSDMFPAEV_					0	0	0		ENSG00000124608|ENST00000244571|AARS2	ENSG00000124608|ENST00000244571|AARS2	ENSG00000124608|ENST00000244571|AARS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.2375793457031	2	496.723318	991.432083	-1.3772	-0.00068409	-2.7332	-0.0013576	-4.1104	-0.0020417	496.721871306531	30.983	0.52935	31.063	30.811	31.341	0.079834					28	11	3	0	0	0	0.20789	1	2091	2091		38.806	21.441	1	312880			43525	3349	29100	29113	49392	49392					-0.06397560345112652
PSDPDCVDRL	10	Unmodified	_PSDPDCVDRL_					0	0	0		nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-6|API5;ENSG00000166181|ENST00000531273|API5	nc|ENSG00000166181|Q9BZZ5-3|API5	nc|ENSG00000166181|Q9BZZ5-3|API5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.7513427734375	2	558.753138	1115.49172	0.087105	4.867E-05	-3.4757	-0.0019421	-3.3886	-0.0018934	558.7510300525196	81.926	1.0829	82.353	82.041	83.124	0.42645					60	26	3	0	0	0	0.38353	1	9479	9479		65.465	2.1591	1	1744500			43526	6166	29101	29114	49393	49393					-0.061402894017419385
PSEAVVCH	8	Unmodified	_PSEAVVCH_					0	0	0			REV__ENST00000368885.7_1_6:111214828-111215200:+|nuORF	REV__ENST00000368885.7_1_6:111214828-111215200:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.20025634765625	2	421.19727	840.379988	2.9358	0.0012366	1.6049	0.00067598	4.5407	0.0019125	421.19797381949434	102.25	0.63708	102.55	102.26	102.9	0.29865					44	14	4	0	0	0	0.84634	2	12440	12440;12449		60.294	14.342	1	2184700	+		43527	25608	29102	29115	49394;49395	49394					-0.046586789682237395
PSEPCFFLL	9	Unmodified	_PSEPCFFLL_					0	0	0			REV__nc|ENSG00000163581|P11168-2|SLC2A2	REV__nc|ENSG00000163581|P11168-2|SLC2A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3110961914062	2	526.759704	1051.50485	0.41945	0.00022095	3.0423	0.0016026	3.4618	0.0018235	526.760580731193	79.498	0.38277	79.914	79.699	80.082	0.41621					14	8	2	0	0	0	0.20789	1	9100	9100		42.474	9.662	1	55713	+		43528	20939	29103	29116	49396	49396					-0.018838065517002178
PSFKLKRLPLN	11	Unmodified	_PSFKLKRLPLN_					0	0	0			REV__nc|ENSG00000198836|O60313-13|OPA1	REV__nc|ENSG00000198836|O60313-13|OPA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.27301025390625	3	438.27484	1311.80269	-1.4635	-0.00064141	-2.7666	-0.0012125	-4.2301	-0.001854	438.27353644756727	106.01	0.81467	106.16	105.83	106.65	0.14843					89	19	6	0	0	0	0.76579	1	11379	11379		18.531	0.69791	1	14795000	+		43529	23391	29104	29117	49397	49397					0.1592619303628453
PSFKLKRLPLN	11	Unmodified	_PSFKLKRLPLN_					0	0	0			REV__nc|ENSG00000198836|O60313-13|OPA1	REV__nc|ENSG00000198836|O60313-13|OPA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.27288818359375	3	438.27484	1311.80269	-1.4634	-0.00064136	-2.9517	-0.0012937	-4.4151	-0.001935	438.2734550831373	106.96	1.4325	107.1	106.6	108.03	0.14105					150	35	5	0	0	0	0.71803	1	11416	11416		28.577	1.827	1	5372900	+		43530	23391	29104	29117	49398	49398					0.1592619303628453
PSFLGISFLKW	11	Unmodified	_PSFLGISFLKW_					0	0	0		ENST00000587299.1_1_17:40672405-40673135:+|nuORF;ENST00000592831.1_1_17:40672405-40672870:+|nuORF	ENST00000587299.1_1_17:40672405-40673135:+|nuORF	ENST00000587299.1_1_17:40672405-40673135:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	647.8650512695312	2	647.863349	1293.71214	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.17	1	119.25	118.75	119.75	0.087753								0	0	0	0.56276	1	12546	12546		29.17	7.2102	1				43531	14187	29105	29118	49399	49399					0.07703723987970079
PSGARQESH	9	Unmodified	_PSGARQESH_					0	0	0			REV__ENST00000496281.1_1_20:62321467-62323226:+|nuORF	REV__ENST00000496281.1_1_20:62321467-62323226:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7188415527344	2	484.730855	967.447156	1.7121	0.00082991	1.3099	0.00063493	3.022	0.0014648	484.7303468901471	100.03	0.30264	100.37	100.22	100.52	0.33294					9	7	2	0	0	0	0.20789	1	12073	12073		19.997	0	1	72597	+		43532	23926	29106	29119	49400	49400					-0.03786932432899448
PSGDAFFS	8	Unmodified	_PSGDAFFS_					0	0	0			REV__ENST00000293778.10_2_17:4636851-4637124:-|nuORF	REV__ENST00000293778.10_2_17:4636851-4637124:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.1831970214844	2	414.182143	826.349734	0.50275	0.00020823	2.0105	0.00083271	2.5132	0.0010409	414.18299345083557	80.376	1.043	80.798	80.427	81.47	0.4215					50	24	3	0	0	0	0.884	1	9225	9225		33.516	5.2613	1	1440800	+		43533	24688	29107	29120	49401	49401					-0.07038714361749498
PSGDAFFS	8	Unmodified	_PSGDAFFS_					0	0	0			REV__ENST00000293778.10_2_17:4636851-4637124:-|nuORF	REV__ENST00000293778.10_2_17:4636851-4637124:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.18280029296875	2	414.182143	826.349734	0.3849	0.00015942	1.0131	0.0004196	1.398	0.00057902	414.1829219864982	81.936	1.2856	82.362	81.962	83.248	0.42646					77	31	3	0	0	0	0.87922	1	9470	9470		31.955	3.7006	1	2282100	+		43534	24688	29107	29120	49402	49402					-0.07038714361749498
PSGHFIVV	8	Unmodified	_PSGHFIVV_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3024597167969	2	428.239796	854.465038	0.16188	6.9322E-05	1.4016	0.00060024	1.5635	0.00066956	428.24075610771746	78.679	3.3146	79.242	78.007	81.322	0.56332					134	78	3	0	0	0	0.4196	1	9289	9289		13.775	0	1	445210			43535	8813	29108	29121	49403	49403					0.03198434559908492
PSGKGRSVR	9	Unmodified	_PSGKGRSVR_					0	0	0			REV__ENSG00000132793|ENST00000373257|LPIN3	REV__ENSG00000132793|ENST00000373257|LPIN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2767639160156	2	472.275232	942.535912	0.18837	8.8961E-05	2.8643	0.0013527	3.0526	0.0014417	472.2764071960003	36.972	1.2427	37.458	37.078	38.321	0.48581					62	30	4	0	0	0	0.51592	1	2943	2943		51.193	1.7511	1	1333500	+		43536	19033	29109	29122	49404	49404					0.062345275974166725
PSGKWNNH	8	Unmodified	_PSGKWNNH_					0	0	0			REV__ENST00000483270.1_1_1:15886792-15891842:+|nuORF	REV__ENST00000483270.1_1_1:15886792-15891842:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.7706298828125	2	470.225208	938.435863	-1.7436	-0.00081987	0.49268	0.00023167	-1.2509	-0.0005882	470.225297390611	39.067	0.90396	39.621	39.236	40.14	0.55449					38	20	3	0	0	0	0.4196	1	3223	3223		19.36	0	1	388680	+		43537	27485	29110	29123	49405	49405					-0.035817097363974426
PSGLLFLSFFS	11	Unmodified	_PSGLLFLSFFS_					0	0	0			REV__ENST00000484094.1_1_2:103414278-103431424:+|nuORF	REV__ENST00000484094.1_1_2:103414278-103431424:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	607.8230590820312	2	607.826432	1213.63831	-0.26133	-0.00015885	-1.8737	-0.0011389	-2.135	-0.0012977	607.8251794964127	28.702	1.1503	28.673	28.366	29.517	-0.029207					69	26	4	0	0	0	0.69995	1	1727	1727		31.53	7.0106	1	1259800	+		43538	27504	29111	29124	49406	49406					0.04003755825669941
PSGNSQFA	8	Unmodified	_PSGNSQFA_					0	0	0			REV__ENST00000466942.2_1_10:77161354-77161606:+|nuORF	REV__ENST00000466942.2_1_10:77161354-77161606:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.17022705078125	2	404.185217	806.355882	-0.18767	-7.5853E-05	-1.374	-0.00055536	-1.5617	-0.00063122	404.1845872153485	78.518	0.42682	78.574	78.415	78.842	0.056114					13	11	2	0	0	0	0.4196	1	7651	7651		31.955	5.1588	1	62654	+		43539	27141	29112	29125	49407	49407					-0.05504196130243599
PSGNSQFA	8	Unmodified	_PSGNSQFA_					0	0	0			REV__ENST00000466942.2_1_10:77161354-77161606:+|nuORF	REV__ENST00000466942.2_1_10:77161354-77161606:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.1701965332031	2	404.185217	806.355882	0.0057825	2.3372E-06	1.285	0.00051938	1.2908	0.00052172	404.1859688963927	78.515	0.31921	78.462	78.359	78.678	-0.053558					10	7	2	0	0	0	0.4196	1	7820	7820		29.15	11.682	1	37641	+		43540	27141	29112	29125	49408	49408					-0.05504196130243599
PSGPLVTPLNI	11	Unmodified	_PSGPLVTPLNI_					0	0	0			REV__ENST00000592126.1_1_17:76182898-76183075:-|nuORF	REV__ENST00000592126.1_1_17:76182898-76183075:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.28759765625	2	554.324057	1106.63356	0.031694	1.7568E-05	-1.7698	-0.00098106	-1.7381	-0.00096349	554.3234239044107	30.659	0.65257	30.663	30.491	31.144	0.0037193					19	14	2	0	0	0	0.17347	1	2020	2020		36.447	7.2972	1	78046	+		43541	21436	29113	29126	49409	49409					0.08450871682885008
PSGSGPGSAPP	11	Unmodified	_PSGSGPGSAPP_					0	0	0			REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10	REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3009338378906	2	455.716882	909.41921	-0.93349	-0.00042541	1.2324	0.00056163	0.29893	0.00013623	455.7171398399394	36.21	0.63363	36.219	35.889	36.523	0.0092773					25	13	3	0	0	0	0.17431	1	2288	2288		24.519	7.8142	1	79815	+		43542	29953	29114	29127	49410	49410					-0.039122554130017306
PSGSGPGSAPP	11	Unmodified	_PSGSGPGSAPP_					0	0	0			REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10	REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	455.716882	909.41921	-0.071197	-3.2446E-05	0.012545	5.7168E-06	-0.058653	-2.6729E-05	455.71677705003	36.152	0.58863	36.133	35.876	36.464	-0.018673	-0.040184	-0.00044489	NaN	24.519	21	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58871	+		43543	29953	29114	29127							-0.039122554130017306
PSGSGPGSAPP	11	Unmodified	_PSGSGPGSAPP_					0	0	0			REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10	REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	455.716882	909.41921	-1.2722	-0.00057976	1.6203	0.00073839	0.34808	0.00015862	455.71743215764013	36.226	0.52197	36.257	35.894	36.416	0.031132	0.083428	0.0010204	NaN	24.519	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55800	+		43544	29953	29114	29127							-0.039122554130017306
PSGSGPGSAPP	11	Unmodified	_PSGSGPGSAPP_					0	0	0			REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10	REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	455.716882	909.41921	0.17491	7.971E-05	-0.50009	-0.0002279	-0.32518	-0.00014819	455.7169215363287	35.934	0.4361	36.037	35.817	36.253	0.10306	-0.13606	-0.00091212	NaN	24.519	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57984	+		43545	29953	29114	29127							-0.039122554130017306
PSGTKVPK	8	Unmodified	_PSGTKVPK_					0	0	0			REV__nc|ENSG00000172943|Q9UPP1-4|PHF8	REV__nc|ENSG00000172943|Q9UPP1-4|PHF8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.2669372558594	2	407.245078	812.475603	0.58706	0.00023908	0.13751	5.6001E-05	0.72457	0.00029508	407.2450945115586	27.363	0.88087	27.187	26.792	27.673	-0.17559					31	19	3	0	0	0	0.4196	1	1560	1560		15.642	0	1	185500	+		43546	30033	29115	29128	49411	49411					0.061864172143259566
PSGWFVTQP	9	Unmodified	_PSGWFVTQP_					0	0	0			REV__ENST00000555447.5_1_14:81864725-81864872:-|nuORF	REV__ENST00000555447.5_1_14:81864725-81864872:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7727966308594	2	509.753267	1017.49198	-0.054134	-2.7595E-05	0.71684	0.00036541	0.66271	0.00033782	509.7534743739293	75.144	0.25326	75.539	75.321	75.574	0.39507					7	5	2	0	0	0	0.20789	1	8491	8491		31.53	3.6476	1	59098	+		43547	28684	29116	29129	49412	49412					-0.01606501619573919
PSGWSPAQ	8	Unmodified	_PSGWSPAQ_					0	0	0			REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1	REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.25653076171875	2	415.195585	828.376617	2.3741	0.0009857	1.3105	0.00054411	3.6846	0.0015298	415.1951331668065	26.247	0.26027	25.907	25.702	25.962	-0.34035					10	5	3	0	0	0	0.4196	1	1419	1419		55.504	5.4797	1	15269	+		43548	29091	29117	29130	49413	49413					-0.04443605750577717
PSGYKNICDLY	11	Unmodified	_PSGYKNICDLY_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.5608825683594	3	424.869151	1271.58562	-0.27232	-0.0001157	0.13211	5.6131E-05	-0.1402	-5.9567E-05	425.204384244822	27.694	0.25957	27.597	27.36	27.619	-0.096947					6	5	2	0	0	0	0.17396	1	1600	1600		25.892	17.857	1	21128	+		43549	22573	29118	29131	49414	49414					-0.03930570299462488
PSHHGVPL	8	Unmodified	_PSHHGVPL_					0	0	0		ENST00000568886.5_1_16:70731059-70731143:-|nuORF	ENST00000568886.5_1_16:70731059-70731143:-|nuORF	ENST00000568886.5_1_16:70731059-70731143:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.22772216796875	2	422.22722	842.439886	0.33102	0.00013977	1.457	0.00061517	1.788	0.00075494	422.227740126127	56.228	1.0937	56.328	55.393	56.487	0.09919					79	43	2	0	0	0	0.88915	1	4734	4734		35.201	0	1	846200			43550	13971	29119	29132	49415	49415					0.012363797573243573
PSHSEPSPP	9	Unmodified	_PSHSEPSPP_					0	0	0			REV__ENST00000591136.1_1_17:43213568-43215707:+|nuORF	REV__ENST00000591136.1_1_17:43213568-43215707:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.71527099609375	2	467.716882	933.41921	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.143	1	89.613	89.113	90.113	0.47068								0	0	0	0.32039	1	10556	10556		44.117	6.9577	1		+		43551	22462	29120	29133	49416	49416					-0.05016255412999726
PSIARRAVRVL	11	Unmodified	_PSIARRAVRVL_					0	0	0		ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2669982910156	3	413.266568	1236.77787	0.21308	8.806E-05	3.766	0.0015564	3.9791	0.0016444	413.2670936743631	41.866	2.062	41.835	40.73	42.792	-0.030991					122	53	4	0	0	0	0.74405	1	3187	3187		23.378	2.5408	1	252870			43552	8753	29121	29134	49417	49417					0.1689555795353499
PSICIVIASTN	11	Unmodified	_PSICIVIASTN_					0	0	0			REV__nc|ENSG00000170836|O15297-2|PPM1D	REV__nc|ENSG00000170836|O15297-2|PPM1D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2991943359375	2	559.299724	1116.5849	-0.12755	-7.1337E-05	0.73127	0.000409	0.60373	0.00033766	559.2999136366896	93.749	1.0491	94.184	93.594	94.643	0.43539					60	26	3	0	0	0	0.45992	1	11260	11260		54.722	5.1863	1	1432900	+		43553	21691	29122	29135	49418	49418					0.03126635051512494
PSIHLLPGKFV	11	Unmodified	_PSIHLLPGKFV_					0	0	0			REV__nc|ENSG00000130150|Q8NHP6-2|MOSPD2	REV__nc|ENSG00000130150|Q8NHP6-2|MOSPD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3662109375	2	604.363516	1206.71248	2.3603	0.0014265	2.8185	0.0017034	5.1787	0.0031298	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.72374	1	12864	12864		31.53	3.6476	1	5984800	+		43554	18849	29123	29136	49419	49419					0.11739143707836774
PSIIRLRAS	9	Unmodified	_PSIIRLRAS_					0	0	0			REV__ENST00000425796.5_1_1:11714968-11715634:+|nuORF	REV__ENST00000425796.5_1_1:11714968-11715634:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8179016113281	2	506.816733	1011.61891	-0.90619	-0.00045927	3.564	0.0018063	2.6578	0.001347	506.81836669409296	60.86	0.69365	61.25	60.9	61.593	0.38945					52	22	3	0	0	0	0.30689	1	6469	6469		64.207	2.0999	1	2316000	+		43555	26537	29124	29137	49420	49420					0.11356844325405291
PSILALKP	8	Unmodified	_PSILALKP_					0	0	0			REV__ENST00000440595.5_1_20:32580307-32580412:-|nuORF	REV__ENST00000440595.5_1_20:32580307-32580412:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7744445800781	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.87479	1	3507	3507		30.504	2.2494	1	11423000	+		43556	26741	29125	29138	49421	49421					0.1071246477083605
PSILHFRI	8	Unmodified	_PSILHFRI_					0	0	0			REV__ENSG00000078618|ENST00000352171|NRDC	REV__ENSG00000078618|ENST00000352171|NRDC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7951354980469	2	491.795269	981.575986	0.29464	0.0001449	0.55726	0.00027406	0.8519	0.00041896	491.7954245147593	45.248	1.2335	45.291	44.693	45.927	0.042599					75	30	3	0	0	0	0.87064	1	3232	3232		29.15	0	1	440250	+		43557	16766	29126	29139	49422	49422					0.08446074267999393
PSILKKTSAYG	11	Unmodified	_PSILKKTSAYG_					0	0	0		ENSG00000084463|ENST00000261167|WBP11	ENSG00000084463|ENST00000261167|WBP11	ENSG00000084463|ENST00000261167|WBP11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.8328857421875	2	582.834788	1163.65502	0.82789	0.00048252	-4.392	-0.0025598	-3.5641	-0.0020773	582.8322150120989	94.225	3.555	94.386	93.365	96.92	0.16119					184	84	3	0	0	0	0.69931	1	9677	9677		31.634	3.5528	1	780120			43558	1518	29127	29140	49423	49423					0.07974256711599992
PSIVTENKQAL	11	Unmodified	_PSIVTENKQAL_					0	0	0			REV__ENSG00000216937|ENST00000639629|CCDC7	REV__ENSG00000216937|ENST00000639629|CCDC7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.833740234375	2	600.335153	1198.65575	-0.31484	-0.00018901	-1.5899	-0.00095445	-1.9047	-0.0011435	600.3340171924639	94.652	2.3297	94.652	93.284	95.614	0					94	54	2	0	0	0	0.66929	1	9409	9409		36.447	3.6962	1	234100	+		43559	23696	29128	29141	49424	49424					0.0643705136067183
PSKFSFSAA	9	Unmodified	_PSKFSFSAA_					0	0	0			REV__nc|ENSG00000136243|O15504-3|NUP42	REV__nc|ENSG00000136243|O15504-3|NUP42	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7902526855469	2	471.239993	940.465432	0.22027	0.0001038	-1.2987	-0.00061202	-1.0785	-0.00050822	471.23868658466347	44.47	0.30659	44.447	44.35	44.656	-0.023079					9	6	2	0	0	0	0.20789	1	3446	3446		27.882	0	1	52921	+		43560	19297	29129	29142	49425	49425					-0.007181905109064246
PSKFSFSAA	9	Unmodified	_PSKFSFSAA_					0	0	0			REV__nc|ENSG00000136243|O15504-3|NUP42	REV__nc|ENSG00000136243|O15504-3|NUP42	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	471.239993	940.465432	-0.97224	-0.00045816	-0.67876	-0.00031986	-1.651	-0.00077801	471.2390927211262	44.499	0.4319	44.465	44.186	44.618	-0.033474	0.0089334	0.00024711	NaN	27.882	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56932	+		43561	19297	29129	29142							-0.007181905109064246
PSKINLHA	8	Unmodified	_PSKINLHA_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25531005859375	2	440.255977	878.497401	-1.1281	-0.00049663	-0.16476	-7.2535E-05	-1.2928	-0.00056917	440.2557479543984	62.714	1.4312	63.102	62.273	63.704	0.3878					74	32	3	0	0	0	0.86791	1	6717	6717		28.254	1.4582	1	707290	+		43562	16877	29130	29143	49426	49426					0.05329221962892916
PSKINRAGRLL	11	Unmodified	_PSKINRAGRLL_					0	0	0		ENSG00000198286|ENST00000396946|CARD11	ENSG00000198286|ENST00000396946|CARD11	ENSG00000198286|ENST00000396946|CARD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.8796997070312	2	612.880396	1223.74624	3.0905	0.0018941	-4.4816	-0.0027467	-1.3912	-0.00085262	612.8774407741583	104.71	3.9916	104.67	103.85	107.84	-0.04039					302	94	6	0	0	0	0.67778	1	11576	11576		35.152	0.97948	1	48609000			43563	8262	29131	29144	49427	49427					0.1433156519960903
PSKKLNLGHSI	11	Unmodified	_PSKKLNLGHSI_					0	0	0			REV__nc|ENSG00000116748|P23109-2|AMPD1	REV__nc|ENSG00000116748|P23109-2|AMPD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8557739257812	2	597.35368	1192.69281	0.9357	0.00055895	2.5932	0.001549	3.5289	0.002108	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.638	1	9660	9660		40.058	2.2467	1	19058000	+		43564	18221	29132	29145	49428	49428					0.10416767697074647
PSKLSTLGLH	10	Unmodified	_PSKLSTLGLH_					0	0	0			REV__ENST00000466122.5_1_21:42622694-42622781:+|nuORF	REV__ENST00000466122.5_1_21:42622694-42622781:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8081665039062	2	526.808574	1051.60259	2.5	0.001317	-3.699	-0.0019487	-1.199	-0.00063163	526.8062522878243	107.68	0.46602	107.78	107.44	107.9	0.10396					25	20	2	0	0	0	0.57924	1	13131	13131		51.193	15.992	1	287170	+		43565	27121	29133	29146	49429	49429					0.07885718368675043
PSKLSTLGLH	10	Unmodified	_PSKLSTLGLH_					0	0	0			REV__ENST00000466122.5_1_21:42622694-42622781:+|nuORF	REV__ENST00000466122.5_1_21:42622694-42622781:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	526.808574	1051.60259	2.5	0.001317	-3.699	-0.0019487	-1.199	-0.00063163	526.8062522878243	107.68	0.46602	107.78	107.44	107.9	0.10396	-0.016177	0.0018158	NaN	51.193	25	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	287170	+		43566	27121	29133	29146							0.07885718368675043
PSKLSTLGLH	10	Unmodified	_PSKLSTLGLH_					0	0	0			REV__ENST00000466122.5_1_21:42622694-42622781:+|nuORF	REV__ENST00000466122.5_1_21:42622694-42622781:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	526.808574	1051.60259	4.93	0.0025972	-6.3538	-0.0033473	-1.4238	-0.00075009	526.8050513194519	107.7	0.2365	107.82	107.65	107.88	0.11716	0.016177	-0.00098141	NaN	51.193	12	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	365150	+		43567	27121	29133	29146							0.07885718368675043
PSKTSQAAY	9	Unmodified	_PSKTSQAAY_					0	0	0			REV__nc|ENSG00000104853|O96005-3|CLPTM1	REV__nc|ENSG00000104853|O96005-3|CLPTM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.7425231933594	2	476.740357	951.46616	-0.10266	-4.8944E-05	4.4828	0.0021371	4.3801	0.0020882	476.74240740505627	78.742	0.58604	78.798	78.549	79.135	0.056114					25	15	2	0	0	0	0.77244	1	7665	7665		32.812	0.85756	1	108680	+		43568	17480	29134	29147	49430	49430					-0.011513958618706965
PSKTSQAAY	9	Unmodified	_PSKTSQAAY_					0	0	0			REV__nc|ENSG00000104853|O96005-3|CLPTM1	REV__nc|ENSG00000104853|O96005-3|CLPTM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	476.740357	951.46616	-0.88301	-0.00042097	5.6733	0.0027047	4.7903	0.0022837	476.74292105111925	78.63	0.68312	78.757	78.44	79.123	0.12695	0.021505	0.00086625	NaN	32.812	33	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86761	+		43569	17480	29134	29147							-0.011513958618706965
PSKTSQAAY	9	Unmodified	_PSKTSQAAY_					0	0	0			REV__nc|ENSG00000104853|O96005-3|CLPTM1	REV__nc|ENSG00000104853|O96005-3|CLPTM1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	476.740357	951.46616	0.57978	0.00027641	3.6455	0.001738	4.2253	0.0020144	476.7419159080956	78.559	0.63667	78.696	78.31	78.947	0.13688	-0.039417	-0.0010672	NaN	32.812	26	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77406	+		43570	17480	29134	29147							-0.011513958618706965
PSKTSQAAY	9	Unmodified	_PSKTSQAAY_					0	0	0			REV__nc|ENSG00000104853|O96005-3|CLPTM1	REV__nc|ENSG00000104853|O96005-3|CLPTM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	476.740357	951.46616	-1.3603	-0.00064849	5.9629	0.0028428	4.6026	0.0021943	476.74315888278556	78.576	0.44455	78.67	78.505	78.95	0.0942	-0.064842	0.0011424	NaN	32.812	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57851	+		43571	17480	29134	29147							-0.011513958618706965
PSKTSQAAY	9	Unmodified	_PSKTSQAAY_					0	0	0			REV__nc|ENSG00000104853|O96005-3|CLPTM1	REV__nc|ENSG00000104853|O96005-3|CLPTM1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	476.740357	951.46616	0.49249	0.00023479	3.7195	0.0017732	4.212	0.002008	476.74186722281684	78.312	0.50465	78.723	78.51	79.014	0.4106	-0.012422	-0.00099668	NaN	32.812	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142720	+		43572	17480	29134	29147							-0.011513958618706965
PSKTSQAAY	9	Unmodified	_PSKTSQAAY_					0	0	0			REV__nc|ENSG00000104853|O96005-3|CLPTM1	REV__nc|ENSG00000104853|O96005-3|CLPTM1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	476.740357	951.46616	-1.1042	-0.00052643	5.5944	0.0026671	4.4902	0.0021406	476.7428324302552	78.168	0.49954	78.732	78.537	79.037	0.56332	-0.003429	0.00079102	NaN	32.812	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124510	+		43573	17480	29134	29147							-0.011513958618706965
PSLEKWPKLIL	11	Unmodified	_PSLEKWPKLIL_					0	0	0			REV__ENST00000584086.5_1_17:26902477-26903857:-|nuORF	REV__ENST00000584086.5_1_17:26902477-26903857:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2734069824219	3	441.939346	1322.79621	-0.1083	-4.7863E-05	1.1939	0.00052765	1.0856	0.00047979	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.75121	1	4852	4852		21.78	3.2494	1	447080	+		43574	26104	29135	29148	49431	49431					0.1477225508488118
PSLESHLCTL	10	Unmodified	_PSLESHLCTL_					0	0	0			REV__ENST00000379477.5_1_13:41835935-41837507:-|nuORF	REV__ENST00000379477.5_1_13:41835935-41837507:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.2769775390625	2	550.276249	1098.53795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.8	1	103.98	103.48	104.48	0.18887								0	0	0	0.45132	1	12624	12624		32.812	3.6424	1		+		43575	25921	29136	29149	49432	49432					-0.007382244996506415
PSLHVVKVL	9	Unmodified	_PSLHVVKVL_					0	0	0		ENST00000431297.1_1_21:15134673-15136650:+|nuORF;ENSG00000141965|ENST00000269856|FEM1A	ENST00000431297.1_1_21:15134673-15136650:+|nuORF	ENST00000431297.1_1_21:15134673-15136650:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.3209533691406	2	496.318577	990.622602	1.025	0.00050873	-0.99495	-0.00049381	0.030054	1.4916E-05	496.3179405711803	19.445	0.27831	19.518	19.389	19.668	0.073465					13	8	2	0	0	0	0.74721	1	401	401		37.159	15.199	1	18515			43576	4535	29137	29150	49433	49433					0.12691514099276446
PSLHVVKVL	9	Unmodified	_PSLHVVKVL_					0	0	0		ENST00000431297.1_1_21:15134673-15136650:+|nuORF;ENSG00000141965|ENST00000269856|FEM1A	ENST00000431297.1_1_21:15134673-15136650:+|nuORF	ENST00000431297.1_1_21:15134673-15136650:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	496.318577	990.622602	-0.81722	-0.0004056	0.81313	0.00040357	-0.0040906	-2.0302E-06	496.31866474020734	19.707	0.28546	19.637	19.577	19.863	-0.070013	0.041467	0.00091086	NaN	37.159	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35755			43577	4535	29137	29150							0.12691514099276446
PSLKLHALL	9	Unmodified	_PSLKLHALL_					0	0	0			REV__ENSG00000215045|ENST00000457091|GRID2IP	REV__ENSG00000215045|ENST00000457091|GRID2IP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.8185119628906	2	496.318577	990.622602	1.025	0.00050873	-0.99495	-0.00049381	0.030054	1.4916E-05	496.3179405711803	19.445	0.27831	19.518	19.389	19.668	0.073465					13	8	2	0	0	0	0.7932	1	409	409		16.473	0	1	18515	+		43578	23675	29138	29151	49434	49434					0.1269151409925371
PSLKLTLTF	9	Unmodified	_PSLKLTLTF_					0	0	0		ENST00000378024.8_2_11:62290973-62291051:-|nuORF	ENST00000378024.8_2_11:62290973-62291051:-|nuORF	ENST00000378024.8_2_11:62290973-62291051:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.3109436035156	2	510.310418	1018.60628	-0.38342	-0.00019566	0.58095	0.00029646	0.19753	0.0001008	510.3105307146198	79.291	0.70142	79.422	79.091	79.792	0.13086					56	21	3	0	0	0	0.6204	1	7543	7543		45.972	5.1941	1	423200			43579	10852	29139	29152	49435	49435					0.09772388142505406
PSLKLTLTF	9	Unmodified	_PSLKLTLTF_					0	0	0		ENST00000378024.8_2_11:62290973-62291051:-|nuORF	ENST00000378024.8_2_11:62290973-62291051:-|nuORF	ENST00000378024.8_2_11:62290973-62291051:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.31390380859375	2	510.310418	1018.60628	0.61904	0.0003159	-0.34976	-0.00017848	0.26928	0.00013742	510.3100260358087	79.225	0.7446	79.363	79.045	79.789	0.13883					63	24	4	0	0	0	0.71772	1	7541	7541		39.253	3.6345	1	424560			43580	10852	29139	29152	49436	49436					0.09772388142505406
PSLLLLLSG	9	Unmodified	_PSLLLLLSG_					0	0	0		ENSG00000174721|ENST00000311575|FGFBP3	ENSG00000174721|ENST00000311575|FGFBP3	ENSG00000174721|ENST00000311575|FGFBP3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.79150390625	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.78536	1	3878	3878		29.15	0.89528	1	186860			43581	6958	29140	29153	49437	49437					0.1098471659677216
PSLLLTITV	9	Unmodified	_PSLLLTITV_					0	0	0		ENST00000526084.1_1_11:7693541-7694179:-|nuORF	ENST00000526084.1_1_11:7693541-7694179:-|nuORF	ENST00000526084.1_1_11:7693541-7694179:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3069152832031	2	478.804968	955.595384	0.24724	0.00011838	1.589	0.00076084	1.8363	0.00087922	478.8055593968592	41.183	1.271	41.256	40.938	42.209	0.073414					62	33	2	0	0	0	0.7932	1	2807	2807		21.96	2.5999	1	199990			43582	13250	29141	29154	49438	49438					0.11580985768227947
PSLLSLKAL	9	Unmodified	_PSLLSLKAL_					0	0	0			REV__ENST00000461446.1_1_22:32914234-32925055:-|nuORF	REV__ENST00000461446.1_1_22:32914234-32925055:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.3105163574219	2	471.305136	940.595718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.346	1	61.9	61.4	62.4	0.55386								0	0	0	0.32255	1	6556	6556		44.377	6.5657	1		+		43583	27029	29142	29155	49439	49439					0.12304405488100656
PSLLYQQKL	9	Unmodified	_PSLLYQQKL_					0	0	0			REV__ENST00000454783.5_1_6:31539934-31540036:+|nuORF	REV__ENST00000454783.5_1_6:31539934-31540036:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3171997070312	2	545.318774	1088.623	-1.3538	-0.00073823	-2.3594	-0.0012866	-3.7132	-0.0020249	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.74721	1	10290	10290		37.159	0.71236	1	5184000	+		43584	26929	29143	29156	49440	49440					0.08222889028479585
PSLPVGLSL	9	Unmodified	_PSLPVGLSL_					0	0	0			REV__ENST00000361786.6_1_14:77580830-77581103:+|nuORF	REV__ENST00000361786.6_1_14:77580830-77581103:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.76849365234375	2	441.768386	881.522219	-0.15332	-6.7733E-05	-0.82572	-0.00036478	-0.97905	-0.00043251	441.76810949175115	107.35	0.84094	107.31	106.9	107.75	-0.034409					58	19	4	0	0	0	0.78983	1	11700	11700		27.882	0	1	1492500	+		43585	25513	29144	29157	49441	49441					0.07671857045625075
PSLRILAIGTR	11	Unmodified	_PSLRILAIGTR_					0	0	0		nc|ENSG00000073350|Q6P1M3-3|LLGL2;nc|ENSG00000073350|Q6P1M3-2|LLGL2;ENSG00000073350|ENST00000392550|LLGL2	nc|ENSG00000073350|Q6P1M3-3|LLGL2	nc|ENSG00000073350|Q6P1M3-3|LLGL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.8793334960938	2	598.877322	1195.74009	-0.39152	-0.00023447	2.9341	0.0017572	2.5426	0.0015227	598.8789120433614	60.901	1.3306	61.29	60.9	62.23	0.38945					78	37	3	0	0	0	0.38974	1	6496	6496		60.167	5.4446	1	2011500			43586	1291	29145	29158	49442	49442					0.15005046968053648
PSLRILAIGTR	11	Unmodified	_PSLRILAIGTR_					0	0	0		nc|ENSG00000073350|Q6P1M3-3|LLGL2;nc|ENSG00000073350|Q6P1M3-2|LLGL2;ENSG00000073350|ENST00000392550|LLGL2	nc|ENSG00000073350|Q6P1M3-3|LLGL2	nc|ENSG00000073350|Q6P1M3-3|LLGL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.8781127929688	2	598.877322	1195.74009	-0.59232	-0.00035473	3.1276	0.001873	2.5353	0.0015183	598.8790492821305	60.727	1.1173	61.28	60.965	62.082	0.55323					70	32	3	0	0	0	0.42858	2	6475	6475;6490		57.149	7.6127	1	2825300			43587	1291	29145	29158	49443;49444	49443					0.15005046968053648
PSLSEPLP	8	Unmodified	_PSLSEPLP_					0	0	0			REV__ENST00000541164.1_19:18553911-18554356:-|nuORF	REV__ENST00000541164.1_19:18553911-18554356:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.7750549316406	2	420.229094	838.443634	-1.1633	-0.00048884	2.421	0.0010174	1.2577	0.00052853	420.2300077087889	42.973	0.51504	42.938	42.63	43.145	-0.035816					14	11	2	0	0	0	0.4196	1	3341	3341		38.806	1.7777	1	49287	+		43588	28476	29146	29159	49445	49445					0.017950047405179248
PSLSTDAHIL	10	Unmodified	_PSLSTDAHIL_					0	0	0		nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;ENSG00000081853|ENST00000394576|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3612670898438	2	527.282389	1052.55022	0.66134	0.00034871	-1.1288	-0.00059518	-0.46743	-0.00024647	527.2817001573053	32.78	0.76609	32.906	32.59	33.356	0.12643					53	17	5	0	0	0	0.37624	1	2341	2341		31.53	0	1	1683200			43589	1472	29147	29160	49446	49446					0.026051352350577872
PSLVLVLSVF	10	Unmodified	_PSLVLVLSVF_					0	0	0		ENST00000493442.1_1_X:103434984-103435086:+|nuORF	ENST00000493442.1_1_X:103434984-103435086:+|nuORF	ENST00000493442.1_1_X:103434984-103435086:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3267211914062	2	537.333893	1072.65323	-0.13143	-7.0624E-05	2.6039	0.0013991	2.4724	0.0013285	537.8352364608411	104.66	0.87237	104.65	104.32	105.2	-0.014809					33	20	2	0	0	0	0.37624	1	11353	11353		15.642	3.435	1	86734			43590	12727	29148	29161	49447	49447					0.11981247693643127
PSLVVRHLLF	10	Unmodified	_PSLVVRHLLF_					0	0	0			REV__ENST00000438023.5_2_9:6758098-6792980:+|nuORF	REV__ENST00000438023.5_2_9:6758098-6792980:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8670043945312	2	590.863683	1179.71281	0.84845	0.00050132	3.6717	0.0021695	4.5201	0.0026708	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.85934	2	11119	11104;11119		35.618	4.0885	1	94771000	+		43591	26717	29149	29162	49448;49449	49449					0.13014563427691428
PSLVVRHLLF	10	Unmodified	_PSLVVRHLLF_					0	0	0			REV__ENST00000438023.5_2_9:6758098-6792980:+|nuORF	REV__ENST00000438023.5_2_9:6758098-6792980:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8671875	2	590.863683	1179.71281	0.89156	0.00052679	3.7018	0.0021873	4.5934	0.0027141	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.86718	1	11125	11125		27.882	0.83493	1	84183000	+		43592	26717	29149	29162	49450	49450					0.13014563427691428
PSLVVVKAM	9	Unmodified	_PSLVVVKAM_					0	0	0			REV__ENST00000477680.5_1_7:4815294-4829561:+|nuORF	REV__ENST00000477680.5_1_7:4815294-4829561:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2877197265625	2	472.285889	942.557224	2.0257	0.00095671	1.7357	0.00081974	3.7614	0.0017765	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.76255	1	10301	10301		35.618	1.4457	1	50843000	+		43593	27364	29150	29163	49451	49451					0.08364776581913702
PSLVVVKAM	9	Unmodified	_PSLVVVKAM_					0	0	0			REV__ENST00000477680.5_1_7:4815294-4829561:+|nuORF	REV__ENST00000477680.5_1_7:4815294-4829561:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2878112792969	2	472.285889	942.557224	0.72641	0.00034307	3.0865	0.0014577	3.8129	0.0018008	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.78058	1	9937	9937		30.504	7.4612	1	48696000	+		43594	27364	29150	29163	49452	49452					0.08364776581913702
PSLWILGKVPV	11	Unmodified	_PSLWILGKVPV_					0	0	0		ENST00000255078.7_1_11:68707211-68707535:+|nuORF	ENST00000255078.7_1_11:68707211-68707535:+|nuORF	ENST00000255078.7_1_11:68707211-68707535:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5748596191406	3	403.584903	1207.73288	0.92579	0.00037363	3.4711	0.0014009	4.3969	0.0017745	403.5862940900743	80.867	0.64601	81.288	81.06	81.706	0.4215					23	15	2	0	0	0	0.1747	1	9320	9320		27.644	0	1	236700			43595	9328	29151	29164	49453	49453					0.13732314367666731
PSMNSQSG	8	Unmodified	_PSMNSQSG_					0	0	0		ENSG00000116128|ENST00000234739|BCL9	ENSG00000116128|ENST00000234739|BCL9	ENSG00000116128|ENST00000234739|BCL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.17047119140625	2	404.16871	806.322867	0.028783	1.1633E-05	2.5917	0.0010475	2.6205	0.0010591	404.17015585403414	78.633	4.5965	78.579	78.135	82.731	-0.053558					226	127	5	0	0	0	0.84341	1	7986	7986		24.203	1.1603	1	6964800			43596	2900	29152	29165	49454	49454					-0.0880414624457444
PSNHVPKNL	9	Unmodified	_PSNHVPKNL_					0	0	0		ENST00000590135.5_1_19:36234478-36235075:-|nuORF;ENST00000586476.5_1_19:36234478-36235258:-|nuORF	ENST00000590135.5_1_19:36234478-36235075:-|nuORF	ENST00000590135.5_1_19:36234478-36235075:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.8055114746094	2	503.277441	1004.54033	-0.66547	-0.00033492	3.3599	0.0016909	2.6944	0.001356	503.27732006795037	31.99	0.72672	32.116	31.733	32.459	0.12642					34	16	3	0	0	0	0.20789	1	2239	2239		25.574	9.1009	1	114060			43597	14168	29153	29166	49455	49455					0.03823992020318201
PSNHVPKNL	9	Unmodified	_PSNHVPKNL_					0	0	0		ENST00000590135.5_1_19:36234478-36235075:-|nuORF;ENST00000586476.5_1_19:36234478-36235258:-|nuORF	ENST00000590135.5_1_19:36234478-36235075:-|nuORF	ENST00000590135.5_1_19:36234478-36235075:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	503.277441	1004.54033	-1.7394	-0.00087538	0.87982	0.0004428	-0.85954	-0.00043259	503.27793105347024	31.826	0.44034	31.826	31.701	32.141	0	-0.149	-0.00042523	NaN	32.812	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23416			43598	14168	29153	29166							0.03823992020318201
PSNSEAHE	8	Unmodified	_PSNSEAHE_					0	0	0		nc|ENSG00000082438|Q53SF7-3|COBLL1;ENSG00000082438|ENST00000652658|COBLL1;nc|ENSG00000082438|Q53SF7-2|COBLL1	nc|ENSG00000082438|Q53SF7-3|COBLL1	nc|ENSG00000082438|Q53SF7-3|COBLL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2811584472656	2	435.683039	869.351525	-0.083791	-3.6507E-05	-0.20325	-8.8552E-05	-0.28704	-0.00012506	435.68151289396116	62.337	0.29001	62.304	62.172	62.462	-0.033173					19	14	2	0	0	0	0.4196	1	5893	5893		30.504	18.993	1	65840			43599	14790	29154	29167	49456	49456					-0.08837705343808011
PSPAHIRLTG	10	Unmodified	_PSPAHIRLTG_					0	0	0		nc|ENSG00000135622|O95754-2|SEMA4F;ENSG00000135622|ENST00000357877|SEMA4F	nc|ENSG00000135622|O95754-2|SEMA4F	nc|ENSG00000135622|O95754-2|SEMA4F	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8267822265625	2	524.79854	1047.58253	-0.13452	-7.0595E-05	-0.94991	-0.00049851	-1.0844	-0.00056911	524.7968824666137	99.218	0.24653	99.44	99.367	99.613	0.22263					10	5	2	0	0	0	0.37624	1	10337	10337		37.812	0	1	69179			43600	4038	29155	29168	49457	49457					0.060639674286903755
PSPAPAGARGV	11	Unmodified	_PSPAPAGARGV_					0	0	0			REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.2673034667969	2	490.269616	978.524678	-0.08195	-4.0178E-05	-2.5087	-0.00123	-2.5907	-0.0012701	490.2683992201926	84.078	3.5378	84.144	83.169	86.707	0.06678					153	81	2	0	0	0	0.7434	1	8455	8455		23.523	0.48021	1	271000	+		43601	28940	29156	29169	49458	49458					0.03455705503279205
PSPARRARLL	10	Unmodified	_PSPARRARLL_					0	0	0		ENST00000370557.5_1_X:139014391-139014727:-|nuORF	ENST00000370557.5_1_X:139014391-139014727:-|nuORF	ENST00000370557.5_1_X:139014391-139014727:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8535766601562	2	568.854181	1135.69381	-0.36185	-0.00020584	-1.2386	-0.0007046	-1.6005	-0.00091044	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.8608	1	10781	10781		34.173	7.4796	1	34546000			43602	10639	29157	29170	49459	49459					0.1313902685665198
PSPARRARLL	10	Unmodified	_PSPARRARLL_					0	0	0		ENST00000370557.5_1_X:139014391-139014727:-|nuORF	ENST00000370557.5_1_X:139014391-139014727:-|nuORF	ENST00000370557.5_1_X:139014391-139014727:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8535766601562	2	568.854181	1135.69381	-1.1637	-0.000662	-0.61846	-0.00035181	-1.7822	-0.0010138	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.86218	2	11275	11275;11389		32.812	3.6629	1	50786000			43603	10639	29157	29170	49460;49461	49460					0.1313902685665198
PSPARRARLL	10	Unmodified	_PSPARRARLL_					0	0	0		ENST00000370557.5_1_X:139014391-139014727:-|nuORF	ENST00000370557.5_1_X:139014391-139014727:-|nuORF	ENST00000370557.5_1_X:139014391-139014727:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.8528442382812	2	568.854181	1135.69381	1.5207	0.00086506	-3.4304	-0.0019514	-1.9097	-0.0010863	568.8521463691729	102.21	3.6255	102.25	101.63	105.26	0.04319					340	87	6	0	0	0	0.86348	1	11054	11054		31.53	2.3803	1	51352000			43604	10639	29157	29170	49462	49462					0.1313902685665198
PSPARRARLL	10	Unmodified	_PSPARRARLL_					0	0	0		ENST00000370557.5_1_X:139014391-139014727:-|nuORF	ENST00000370557.5_1_X:139014391-139014727:-|nuORF	ENST00000370557.5_1_X:139014391-139014727:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8544921875	2	568.854181	1135.69381	0.87008	0.00049495	-2.8282	-0.0016088	-1.9581	-0.0011139	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.8651	1	10985	10985		25.574	1.0549	1	78933000			43605	10639	29157	29170	49463	49463					0.1313902685665198
PSPARRARLL	10	Unmodified	_PSPARRARLL_					0	0	0		ENST00000370557.5_1_X:139014391-139014727:-|nuORF	ENST00000370557.5_1_X:139014391-139014727:-|nuORF	ENST00000370557.5_1_X:139014391-139014727:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8538208007812	2	568.854181	1135.69381	-1.3907	-0.00079112	-0.55616	-0.00031637	-1.9469	-0.0011075	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.86471	1	10979	10979		30.318	1.1682	1	72465000			43606	10639	29157	29170	49464	49464					0.1313902685665198
PSPAYVTKGN	10	Unmodified	_PSPAYVTKGN_					0	0	0			REV__ENST00000560764.5_1_15:57511653-57526277:+|nuORF	REV__ENST00000560764.5_1_15:57511653-57526277:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.8165283203125	2	517.269281	1032.52401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.62	1	111.66	111.16	112.16	0.041832								0	0	0	0.45132	1	13504	13504		37.508	3.9926	1		+		43607	28769	29158	29171	49465	49465					0.00904866063569898
PSPFRALKP	9	Unmodified	_PSPFRALKP_					0	0	0		ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	ENSG00000266524|ENST00000580279|GDF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8001708984375	2	506.800552	1011.58655	-0.4991	-0.00025294	1.3209	0.00066945	0.82183	0.00041651	506.8011482581911	44.494	2.6105	44.503	42.78	45.391	0.0084534					109	64	3	0	0	0	0.7932	1	3203	3203		21.96	1.4781	1	373670			43608	8952	29159	29172	49466	49466					0.08122056922422871
PSPGGPGG	8	Unmodified	_PSPGGPGG_					0	0	0			REV__nc|ENSG00000135766|Q9GZT9-3|EGLN1	REV__nc|ENSG00000135766|Q9GZT9-3|EGLN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	625.1475830078125	1	625.294016	624.28674	-0.18492	-0.00011563	0.6745	0.00042176	0.48958	0.00030613	625.2941387422933	34.828	2.9527	34.823	33.029	35.981	-0.0047417					104	70	2	0	0	0	0.4196	1	1903	1903		5.0869	3.4679	1	68542	+		43609	19247	29160	29173	49467	49467					-0.040432353591313586
PSPGGPGG	8	Unmodified	_PSPGGPGG_					0	0	0			REV__nc|ENSG00000135766|Q9GZT9-3|EGLN1	REV__nc|ENSG00000135766|Q9GZT9-3|EGLN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		1	625.294016	624.28674	-0.69084	-0.00043198	0.83434	0.00052171	0.1435	8.9733E-05	625.2943005336599	34.606	2.8461	34.613	33.316	36.162	0.0063934	-0.12199	4.5001E-05	NaN	5.0869	99	65	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78669	+		43610	19247	29160	29173							-0.040432353591313586
PSPKKPPSPP	10	Unmodified	_PSPKKPPSPP_					0	0	0			REV__nc|ENSG00000163406|Q16348-2|SLC15A2	REV__nc|ENSG00000163406|Q16348-2|SLC15A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2972412109375	2	516.297842	1030.58113	0.12873	6.6461E-05	-0.45795	-0.00023644	-0.32922	-0.00016998	516.297443605496	62.606	0.69175	63.161	62.777	63.469	0.55449					25	15	2	0	0	0	0.47091	1	6744	6744		58.23	11.773	1	321220	+		43611	20913	29161	29174	49468	49468					0.06706333339957382
PSPKRNTSD	9	Unmodified	_PSPKRNTSD_					0	0	0			REV__ENST00000338338.9_1_1:1310680-1310836:-|nuORF	REV__ENST00000338338.9_1_1:1310680-1310836:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.329833984375	2	501.254163	1000.49377	1.0179	0.00051023	-0.93544	-0.00046889	0.08247	4.1339E-05	501.2535002007389	19.685	0.34138	19.757	19.574	19.916	0.071127					16	12	2	0	0	0	0.20789	1	418	418		40.778	10.937	1	21926	+		43612	25218	29162	29175	49469	49469					-0.006454926016203899
PSPKYRVYTAS	11	Unmodified	_PSPKYRVYTAS_					0	0	0			REV__ENSG00000105738|ENST00000222345|SIPA1L3	REV__ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8930053710938	2	634.83532	1267.65609	-0.0084937	-5.3921E-06	-0.91558	-0.00058124	-0.92407	-0.00058664	634.8347798262727	105.95	0.20831	105.95	105.77	105.97	0					6	4	2	0	0	0	0.16519	1	10957	10957		51.528	7.877	1	54088	+		43613	17567	29163	29176	49470	49470					0.03296471080511765
PSPKYRVYTAS	11	Unmodified	_PSPKYRVYTAS_					0	0	0			REV__ENSG00000105738|ENST00000222345|SIPA1L3	REV__ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8929443359375	2	634.83532	1267.65609	1.4952	0.00094923	-4.088	-0.0025952	-2.5928	-0.001646	634.8315859028205	105.49	0.647	105.65	105.4	106.04	0.15924					23	16	2	0	0	0	0.16519	1	11286	11286		51.528	0.33506	1	203510	+		43614	17567	29163	29176	49471	49471					0.03296471080511765
PSPLPPAH	8	Unmodified	_PSPLPPAH_					0	0	0		nc|ENSG00000235927|Q8NBZ9|NEXN-AS1	nc|ENSG00000235927|Q8NBZ9|NEXN-AS1	nc|ENSG00000235927|Q8NBZ9|NEXN-AS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.7417297363281	2	408.224146	814.433738	2.5614	0.0010456	-1.1088	-0.00045263	1.4527	0.00059301	408.22327853184237	25.645	0.72034	25.214	24.762	25.482	-0.4311					20	16	2	0	0	0	0.4196	1	1340	1340		20.482	0	1	41721			43615	15274	29164	29177	49472	49472					0.019098615257917118
PSPNDNLSL	9	Unmodified	_PSPNDNLSL_					0	0	0			REV__ENSG00000111335|ENST00000392583|OAS2	REV__ENSG00000111335|ENST00000392583|OAS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2784729003906	2	478.737814	955.461075	-1.0223	-0.00048939	-0.78385	-0.00037526	-1.8061	-0.00086465	478.7372581917454	84.735	0.95087	85.182	84.792	85.742	0.44736					40	23	3	0	0	0	0.20789	1	9857	9857		24.519	0	1	351250	+		43616	17867	29165	29178	49473	49473					-0.018436997244748454
PSPPPLTVALL	11	Unmodified	_PSPPPLTVALL_					0	0	0		ENST00000520931.5_2_5:150409649-150409784:-|nuORF	ENST00000520931.5_2_5:150409649-150409784:-|nuORF	ENST00000520931.5_2_5:150409649-150409784:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8335571289062	2	552.8368	1103.65905	-0.74602	-0.00041243	-4.1168	-0.0022759	-4.8628	-0.0026884	552.8344221073519	82.073	1.2669	82.073	81.549	82.816	0					61	32	2	0	0	0	0.70737	1	7644	7644		30.318	3.6248	1	174970			43617	13164	29166	29179	49474	49474					0.11136346205330483
PSPPSLGGSA	10	Unmodified	_PSPPSLGGSA_					0	0	0		ENST00000272438.8_1_2:71215405-71215681:-|nuORF	ENST00000272438.8_1_2:71215405-71215681:-|nuORF	ENST00000272438.8_1_2:71215405-71215681:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2235107421875	2	435.2218	868.429047	1.1398	0.00049606	2.7676	0.0012045	3.9074	0.0017006	435.2228723544136	94.167	0.8138	94.599	94.344	95.158	0.4324					35	21	2	0	0	0	0.80179	1	11226	11226		39.253	2.0937	1	998480			43618	9567	29167	29180	49475	49475					-0.010430674076133073
PSPQLLRLLS	10	Unmodified	_PSPQLLRLLS_					0	0	0		ENSG00000164867|ENST00000297494|NOS3	ENSG00000164867|ENST00000297494|NOS3	ENSG00000164867|ENST00000297494|NOS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	562.3435668945312	2	562.345323	1122.67609	0.40646	0.00022857	-3.4682	-0.0019503	-3.0617	-0.0017217	562.3432469329894	90.325	4.336	90.539	89.434	93.77	0.21404					201	103	3	0	0	0	0.85834	1	9050	9050		22.58	4.2552	1	624710			43619	6013	29168	29181	49476	49476					0.11966266811123205
PSPRIKSKRSL	11	Unmodified	_PSPRIKSKRSL_					0	0	0		nc|ENSG00000130052|Q92502|STARD8;ENSG00000130052|ENST00000374599|STARD8	nc|ENSG00000130052|Q92502|STARD8	nc|ENSG00000130052|Q92502|STARD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.89306640625	2	634.893503	1267.77245	0.93451	0.00059331	-2.8314	-0.0017976	-1.8969	-0.0012043	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.6493	1	11510	11510		38.754	10.871	1	69492000			43620	3619	29169	29182	49477	49477					0.14927834371087556
PSPSLLYKSTK	11	Unmodified	_PSPSLLYKSTK_					0	0	0		nc|ENSG00000101191|Q9BTC0-1|DIDO1;ENSG00000101191|ENST00000395343|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.9012145996094	3	407.567689	1219.68124	0.399	0.00016262	-1.9373	-0.00078957	-1.5383	-0.00062695	407.56682923332073	26.935	0.46041	26.976	26.674	27.134	0.040834					21	13	2	0	0	0	0.68431	1	1182	1182		34.087	9.8547	1	32194			43621	1908	29170	29183	49478	49478					0.08018525883085204
PSPSLLYKSTK	11	Unmodified	_PSPSLLYKSTK_					0	0	0		nc|ENSG00000101191|Q9BTC0-1|DIDO1;ENSG00000101191|ENST00000395343|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	407.567689	1219.68124	-0.35832	-0.00014604	-1.4644	-0.00059686	-1.8228	-0.0007429	407.5670786820963	26.929	0.67741	26.89	26.628	27.305	-0.038523	-0.10231	0.00083492	NaN	34.087	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37618			43622	1908	29170	29183							0.08018525883085204
PSPSLLYKSTK	11	Unmodified	_PSPSLLYKSTK_					0	0	0		nc|ENSG00000101191|Q9BTC0-1|DIDO1;ENSG00000101191|ENST00000395343|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	407.567689	1219.68124	2.7796	0.0011329	-4.7778	-0.0019473	-1.9982	-0.00081441	407.56576453677576	27.14	0.57136	27.112	26.893	27.464	-0.027706	0.11956	-0.0032164	NaN	34.087	28	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30752			43623	1908	29170	29183							0.08018525883085204
PSPSTLIQPG	10	Unmodified	_PSPSTLIQPG_					0	0	0			REV__ENSG00000157764|ENST00000646891|BRAF	REV__ENSG00000157764|ENST00000646891|BRAF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.7705993652344	2	498.771657	995.528761	1.4022	0.0006994	-2.2226	-0.0011086	-0.82032	-0.00040915	498.7703924385365	107.18	1.1359	107.28	106.73	107.87	0.10396					94	42	3	0	0	0	0.77314	1	13055	13055		40.778	6.6056	1	733090	+		43624	20561	29171	29184	49479	49479					0.03081750206331435
PSPTHLSCIF	10	Unmodified	_PSPTHLSCIF_					0	0	0		ENST00000589669.1_1_19:13872231-13873207:+|nuORF	ENST00000589669.1_1_19:13872231-13873207:+|nuORF	ENST00000589669.1_1_19:13872231-13873207:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.276123046875	2	551.273509	1100.53247	0.32503	0.00017918	3.1083	0.0017135	3.4334	0.0018927	551.2751109394707	27.083	1.2037	27.045	26.676	27.88	-0.038523					78	29	4	0	0	0	0.86589	1	1322	1322		29.15	1.0681	1	656180			43625	14243	29172	29185	49480	49480					-0.013779032914726486
PSPVSQIRLLR	11	Unmodified	_PSPVSQIRLLR_					0	0	0		ENST00000599788.1_2_19:50414393-50432585:-|nuORF;ENST00000596437.5_1_19:50414393-50430957:-|nuORF	ENST00000599788.1_2_19:50414393-50432585:-|nuORF	ENST00000599788.1_2_19:50414393-50432585:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5934753417969	3	422.594461	1264.76155	-1.8117	-0.0007656	-1.6807	-0.00071027	-3.4924	-0.0014759	422.59357864263933	54.504	2.542	54.559	53.757	56.299	0.055611					235	90	4	0	0	0	0.74405	1	4590	4590		23.378	6.6605	1	1177200			43626	14337	29173	29186	49481	49481					0.13976431996798055
PSPYSTTVP	9	Unmodified	_PSPYSTTVP_					0	0	0			REV__ENSG00000120738|ENST00000239938|EGR1	REV__ENSG00000120738|ENST00000239938|EGR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	475.2381896972656	2	474.737283	947.460012	-0.60369	-0.00028659	1.6061	0.00076246	1.0024	0.00047587	474.73792226013785	35.127	0.43633	35.071	34.768	35.205	-0.056385					21	10	3	0	0	0	0.78058	1	2233	2233		30.504	3.7075	1	38436	+		43627	18428	29174	29187	49482	49482					-0.01581914093389969
PSQPVKNGTGP	11	Unmodified	_PSQPVKNGTGP_					0	0	0		nc|ENSG00000062194|Q86WP2-4|GPBP1;nc|ENSG00000062194|Q86WP2-3|GPBP1;ENSG00000062194|ENST00000506184|GPBP1;nc|ENSG00000062194|Q86WP2-2|GPBP1	nc|ENSG00000062194|Q86WP2-4|GPBP1	nc|ENSG00000062194|Q86WP2-4|GPBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.2866821289062	2	541.285463	1080.55637	0.81811	0.00044283	-1.0214	-0.00055284	-0.20325	-0.00011001	541.2847834834622	20.168	0.8377	20.239	19.945	20.783	0.071129					65	34	3	0	0	0	0.61369	1	474	474		42.864	2.0861	1	219780			43628	1083	29175	29188	49483	49483					0.019316534665676954
PSQPVKNGTGP	11	Unmodified	_PSQPVKNGTGP_					0	0	0		nc|ENSG00000062194|Q86WP2-4|GPBP1;nc|ENSG00000062194|Q86WP2-3|GPBP1;ENSG00000062194|ENST00000506184|GPBP1;nc|ENSG00000062194|Q86WP2-2|GPBP1	nc|ENSG00000062194|Q86WP2-4|GPBP1	nc|ENSG00000062194|Q86WP2-4|GPBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.2855224609375	2	541.285463	1080.55637	0.52598	0.00028471	-0.67244	-0.00036398	-0.14646	-7.9278E-05	541.2849430955068	20.499	0.76031	20.43	20.175	20.935	-0.069733					65	32	4	0	0	0	0.57736	1	544	544		46.457	10.01	1	220230			43629	1083	29175	29188	49484	49484					0.019316534665676954
PSQTQKSTD	9	Unmodified	_PSQTQKSTD_					0	0	0		ENSG00000182898|ENST00000368806|TCHHL1	ENSG00000182898|ENST00000368806|TCHHL1	ENSG00000182898|ENST00000368806|TCHHL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	496.23773193359375	2	496.238178	990.461803	-1.1591	-0.00057517	1.339	0.00066446	0.17994	8.9292E-05	496.238618590653	30.86	0.93819	30.85	30.405	31.344	-0.010656					47	23	4	0	0	0	0.76419	1	1658	1658		35.152	0.97948	1	242080			43630	7480	29176	29189	49485	49485					-0.03380905075425744
PSQTQKSTD	9	Unmodified	_PSQTQKSTD_					0	0	0		ENSG00000182898|ENST00000368806|TCHHL1	ENSG00000182898|ENST00000368806|TCHHL1	ENSG00000182898|ENST00000368806|TCHHL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2374267578125	2	496.238178	990.461803	0.044181	2.1924E-05	-0.1185	-5.8803E-05	-0.074317	-3.6879E-05	496.23798670369024	31.087	1.204	31.091	30.623	31.827	0.0037212					56	27	4	0	0	0	0.10914	1	2085	2085		90.601	17.722	1	1990100			43631	7480	29176	29189	49486	49486					-0.03380905075425744
PSQYKYHRRSK	11	Unmodified	_PSQYKYHRRSK_					0	0	0			REV__ENST00000588072.5_1_18:11884309-11884447:-|nuORF	REV__ENST00000588072.5_1_18:11884309-11884447:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.9295959472656	3	483.928503	1448.76368	0.11537	5.583E-05	2.091	0.0010119	2.2063	0.0010677	483.92948716936945	26.29	0.71645	26.395	26.013	26.73	0.1054					81	32	3	0	0	0	0.75121	1	1001	1001		21.78	2.5177	1	319080	+		43632	29134	29177	29190	49487	49487					0.057248607345627534
PSRHLLFL	8	Unmodified	_PSRHLLFL_					0	0	0		ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	ENST00000491491.1_1_13:77900653-77900983:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.795654296875	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.82464	1	3751	3751		21.702	0	1	1219600			43633	12686	29178	29191	49488	49488					0.08446074267999393
PSRILLWK	8	Unmodified	_PSRILLWK_					0	0	0		nc|ENSG00000162576|Q9BRK3-2|MXRA8;ENSG00000162576|ENST00000309212|MXRA8;nc|ENSG00000162576|Q9BRK3-4|MXRA8	nc|ENSG00000162576|Q9BRK3-2|MXRA8;ENSG00000162576|ENST00000309212|MXRA8	nc|ENSG00000162576|Q9BRK3-2|MXRA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8175964355469	2	506.818744	1011.62294	-0.90618	-0.00045927	-0.40461	-0.00020507	-1.3108	-0.00066434	506.81836669409296	60.86	0.69365	61.25	60.9	61.593	0.38945					52	22	3	0	0	0	0.81485	1	6480	6480		62.107	3.3255	1	2316000			43634	15045;5698	29179	29192	49489	49489					0.1175893381912374
PSRILLWK	8	Unmodified	_PSRILLWK_					0	0	0		nc|ENSG00000162576|Q9BRK3-2|MXRA8;ENSG00000162576|ENST00000309212|MXRA8;nc|ENSG00000162576|Q9BRK3-4|MXRA8	nc|ENSG00000162576|Q9BRK3-2|MXRA8;ENSG00000162576|ENST00000309212|MXRA8	nc|ENSG00000162576|Q9BRK3-2|MXRA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.8183898925781	2	506.818744	1011.62294	0.41792	0.00021181	-1.8586	-0.00094198	-1.4407	-0.00073017	506.8176154264681	60.747	0.83125	61.3	60.891	61.723	0.55323					53	25	3	0	0	0	0.58928	2	6470	6459;6470		71.877	5.4482	1	2082900			43635	15045;5698	29179	29192	49490;49491	49491					0.1175893381912374
PSRKGVRPSPP	11	Unmodified	_PSRKGVRPSPP_					0	0	0			REV__nc|ENSG00000072195|Q15772-1|SPEG	REV__nc|ENSG00000072195|Q15772-1|SPEG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3435668945312	2	589.343646	1176.67274	2.472	0.0014569	-3.7901	-0.0022337	-1.3181	-0.00077681	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.7144	1	10362	10362		29.17	2.4771	1	16740000	+		43636	16641	29180	29193	49492	49492					0.09147016757151505
PSRKRRKREP	10	Unmodified	_PSRKRRKREP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2676086425781	3	437.268971	1308.78508	-0.071191	-3.113E-05	-2.4084	-0.0010531	-2.4796	-0.0010843	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.85086	1	4387	4387		19.263	2.0959	1	3270700			43637	8437	29181	29194	49493	49493					0.14304290553968713
PSRKRRKREP	10	Unmodified	_PSRKRRKREP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2685546875	3	437.268971	1308.78508	1.089	0.00047619	-3.8083	-0.0016652	-2.7193	-0.001189	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.81117	1	4863	4863		38.754	12.69	1	2745300			43638	8437	29181	29194	49494	49494					0.14304290553968713
PSRKRRKREP	10	Unmodified	_PSRKRRKREP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26739501953125	3	437.268971	1308.78508	0.84573	0.00036981	-1.8819	-0.00082288	-1.0361	-0.00045307	437.2672326865052	55.751	0.97246	55.782	55.205	56.177	0.030842					52	24	3	0	0	0	0.86014	1	5021	5021		23.378	4.1152	1	219340			43639	8437	29181	29194	49495	49495					0.14304290553968713
PSRKRRKREP	10	Unmodified	_PSRKRRKREP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26806640625	3	437.268971	1308.78508	-1.575	-0.00068869	-0.91628	-0.00040066	-2.4913	-0.0010893	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.86409	2	3935	3935;4029		28.577	7.5445	1	3429700			43640	8437	29181	29194	49496;49497	49496					0.14304290553968713
PSRKRRKREP	10	Unmodified	_PSRKRRKREP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26800537109375	3	437.268971	1308.78508	-0.53561	-0.00023421	-1.9117	-0.00083594	-2.4473	-0.0010701	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.86089	1	4099	4099		34.087	8.9605	1	4132000			43641	8437	29181	29194	49498	49498					0.14304290553968713
PSRKRRKREP	10	Unmodified	_PSRKRRKREP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26715087890625	3	437.268971	1308.78508	-0.59734	-0.0002612	-2.1326	-0.00093253	-2.73	-0.0011937	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.84763	2	4479	4400;4479		20.315	6.229	1	2564600			43642	8437	29181	29194	49499;49500	49500					0.14304290553968713
PSRLLLHF	8	Unmodified	_PSRLLLHF_					0	0	0			REV__ENST00000483485.5_1_20:17934679-17937653:-|nuORF	REV__ENST00000483485.5_1_20:17934679-17937653:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79559326171875	2	491.795269	981.575986	-0.75954	-0.00037354	1.5722	0.0007732	0.81265	0.00039966	491.7959244094971	46.601	1.9125	46.572	45.843	47.756	-0.028782					158	52	4	0	0	0	0.86288	1	3859	3859		26.796	0	1	3015000	+		43643	27491	29182	29195	49501	49501					0.08446074267988024
PSRLRPALFPR	11	Unmodified	_PSRLRPALFPR_					0	0	0			REV__ENSG00000213906|ENST00000533293|LTB4R2	REV__ENSG00000213906|ENST00000533293|LTB4R2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26751708984375	3	437.266568	1308.77787	-0.73822	-0.0003228	3.7045	0.0016198	2.9662	0.001297	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.75457	1	4599	4599		21.032	2.5012	1	3639500	+		43644	23635	29183	29196	49502	49502					0.13583557953506897
PSRLRPALFPR	11	Unmodified	_PSRLRPALFPR_					0	0	0			REV__ENSG00000213906|ENST00000533293|LTB4R2	REV__ENSG00000213906|ENST00000533293|LTB4R2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2676696777344	3	437.266568	1308.77787	-0.68964	-0.00030156	3.497	0.0015291	2.8073	0.0012275	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.79224	1	4821	4821		12.957	0.52465	1	2651700	+		43645	23635	29183	29196	49503	49503					0.13583557953506897
PSRLRPALFPR	11	Unmodified	_PSRLRPALFPR_					0	0	0			REV__ENSG00000213906|ENST00000533293|LTB4R2	REV__ENSG00000213906|ENST00000533293|LTB4R2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26776123046875	3	437.266568	1308.77787	1.1681	0.00051075	1.7871	0.00078144	2.9551	0.0012922	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.76892	1	4544	4544		17.833	0.6664	1	4130900	+		43646	23635	29183	29196	49504	49504					0.13583557953506897
PSRLRPALFPR	11	Unmodified	_PSRLRPALFPR_					0	0	0			REV__ENSG00000213906|ENST00000533293|LTB4R2	REV__ENSG00000213906|ENST00000533293|LTB4R2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26776123046875	3	437.266568	1308.77787	0.31383	0.00013723	2.5449	0.0011128	2.8587	0.00125	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.75121	1	4441	4441		21.78	0.74819	1	2521600	+		43647	23635	29183	29196	49505	49505					0.13583557953506897
PSRLRPALFPR	11	Unmodified	_PSRLRPALFPR_					0	0	0			REV__ENSG00000213906|ENST00000533293|LTB4R2	REV__ENSG00000213906|ENST00000533293|LTB4R2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2678527832031	3	437.266568	1308.77787	-0.53562	-0.00023421	3.585	0.0015676	3.0494	0.0013334	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.72892	1	4187	4187		26.75	0	1	4132000	+		43648	23635	29183	29196	49506	49506					0.13583557953506897
PSRPATDPQ	9	Unmodified	_PSRPATDPQ_					0	0	0			REV__ENSG00000168447|ENST00000343070|SCNN1B	REV__ENSG00000168447|ENST00000343070|SCNN1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71881103515625	2	484.743431	967.472308	1.7502	0.00084838	-3.9692	-0.001924	-2.219	-0.0010756	484.7412051164222	99.976	0.14998	100.32	100.23	100.38	0.34591					5	3	2	0	0	0	0.20789	1	12140	12140		42.864	3.6114	1	57852	+		43649	21488	29184	29197	49507	49507					-0.012728776303333689
PSRRASVP	8	Unmodified	_PSRRASVP_					0	0	0			REV__ENST00000397118.7_1_14:24041109-24044930:-|nuORF	REV__ENST00000397118.7_1_14:24041109-24044930:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2526550292969	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.8621	1	7922	7922		26.693	0	1	1788100	+		43650	26158	29185	29198	49508	49508					0.04839453677379879
PSRRPCPQ	8	Unmodified	_PSRRPCPQ_					0	0	0			REV__ENST00000397898.7_1_21:46234009-46237924:-|nuORF	REV__ENST00000397898.7_1_21:46234009-46237924:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.7706298828125	2	470.742711	939.470869	-1.5354	-0.00072279	-1.9013	-0.00089501	-3.4367	-0.0016178	470.7412618972893	38.714	0.62998	39.237	38.952	39.582	0.52235					21	14	2	0	0	0	0.4196	1	3223	3223		26.693	0	1	103240	+		43651	26186	29186	29199	49509	49509					-0.0012879020008540465
PSRRRRTGPLK	11	Unmodified	_PSRRRRTGPLK_					0	0	0			REV__nc|nan|A6NC05|C5orf63	REV__nc|nan|A6NC05|C5orf63	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.94000244140625	3	441.940855	1322.80073	-0.69974	-0.00030924	-1.673	-0.00073935	-2.3727	-0.0010486	441.9399909148648	56.856	0.75961	56.83	56.632	57.391	-0.026108					86	36	3	0	0	0	0.75121	1	4824	4824		21.78	0	1	338630	+		43652	30322	29187	29200	49510	49510					0.15224577071035128
PSRRVQGRRVV	11	Unmodified	_PSRRVQGRRVV_					0	0	0		ENSG00000102053|ENST00000338957|ZC3H12B;nc|ENSG00000102053|Q5HYM0-2|ZC3H12B;ENSG00000149289|ENST00000278590|ZC3H12C;nc|ENSG00000149289|Q9C0D7-2|ZC3H12C	ENSG00000102053|ENST00000338957|ZC3H12B	ENSG00000102053|ENST00000338957|ZC3H12B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.267333984375	3	437.268971	1308.78508	1.2133	0.00053055	-3.7673	-0.0016473	-2.5539	-0.0011168	437.2672396896614	50.554	1.7579	50.562	49.504	51.262	0.0077477					187	47	5	0	0	0	0.76892	1	4407	4407		17.833	0.6664	1	3327600			43653	1984	29188	29201	49511	49511					0.14304290553968713
PSRSKKKTS	9	Unmodified	_PSRSKKKTS_					0	0	0			REV__ENSG00000172985|ENST00000309415|SH3RF3	REV__ENSG00000172985|ENST00000309415|SH3RF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80450439453125	2	509.803823	1017.59309	-0.93407	-0.00047619	0.87176	0.00044443	-0.062308	-3.1765E-05	509.8042014095356	84.682	2.4835	84.682	83.134	85.618	0					128	59	3	0	0	0	0.77696	1	7931	7931		31.53	3.2755	1	609880	+		43654	21874	29189	29202	49512	49512					0.08499950083148633
PSRSKKKTS	9	Unmodified	_PSRSKKKTS_					0	0	0			REV__ENSG00000172985|ENST00000309415|SH3RF3	REV__ENSG00000172985|ENST00000309415|SH3RF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8037109375	2	509.803823	1017.59309	0.9788	0.00049899	-1.2019	-0.00061275	-0.22313	-0.00011375	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.78536	1	8687	8687		29.15	0	1	979740	+		43655	21874	29189	29202	49513	49513					0.08499950083148633
PSRVKSLKLPA	11	Unmodified	_PSRVKSLKLPA_					0	0	0			REV__nc|ENSG00000197249|P01009-2|SERPINA1	REV__nc|ENSG00000197249|P01009-2|SERPINA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.3815307617188	2	598.379697	1194.74484	-0.74115	-0.00044349	3.5243	0.0021089	2.7832	0.0016654	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.74763	1	3014	3014		22.58	3.317	1	772980	+		43656	30135	29190	29203	49514	49514					0.15525931110846614
PSRVVLAFV	9	Unmodified	_PSRVVLAFV_					0	0	0		ENST00000257013.8_1_X:134166773-134167211:+|nuORF	ENST00000257013.8_1_X:134166773-134167211:+|nuORF	ENST00000257013.8_1_X:134166773-134167211:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.2987976074219	2	494.302927	986.591301	-0.7737	-0.00038244	-3.4255	-0.0016932	-4.1992	-0.0020757	494.3011465997647	101.19	1.3573	101.19	100.82	102.17	0					71	32	4	0	0	0	0.78058	1	10344	10344		30.504	2.6214	1	465620			43657	9347	29191	29204	49515	49515					0.09746941065191095
PSSEQIRG	8	Unmodified	_PSSEQIRG_					0	0	0			REV__ENSG00000166004|ENST00000325212|CEP295	REV__ENSG00000166004|ENST00000325212|CEP295	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26556396484375	2	437.224874	872.435195	1.7174	0.00075088	-2.7068	-0.0011835	-0.98943	-0.0004326	437.2231214626989	24.059	0.29382	23.545	23.365	23.658	-0.51365					9	6	2	0	0	0	0.4196	1	1135	1135		34.173	6.2903	1	42940	+		43658	21241	29192	29205	49516	49516					-0.006125491760826662
PSSHLKAPFSQ	11	Unmodified	_PSSHLKAPFSQ_					0	0	0			REV__ENSG00000105613|ENST00000251472|MAST1	REV__ENSG00000105613|ENST00000251472|MAST1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.22906494140625	3	400.212017	1197.61422	-0.50724	-0.000203	-1.9996	-0.00080027	-2.5069	-0.0010033	400.21118186124374	42.036	0.81069	42.45	41.973	42.784	0.4139					32	20	3	0	0	0	0.17504	1	3759	3759		10.562	0	1	894550	+		43659	17556	29193	29206	49517	49517					0.02331915391982875
PSSIRYHE	8	Unmodified	_PSSIRYHE_					0	0	0		ENST00000430298.6_1_19:12222347-12224207:+|nuORF	ENST00000430298.6_1_19:12222347-12224207:+|nuORF	ENST00000430298.6_1_19:12222347-12224207:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7457275390625	2	494.745973	987.477394	0.75314	0.00037261	-1.0766	-0.00053263	-0.32344	-0.00016002	494.7453654470283	19.933	0.31633	19.912	19.752	20.068	-0.020922					28	15	2	0	0	0	0.87064	1	447	447		29.15	0.89528	1	169620			43660	11630	29194	29207	49518	49518					-0.016845737677272155
PSSLLSTSK	9	Unmodified	_PSSLLSTSK_					0	0	0			REV__ENST00000398083.5_1_20:30450513-30457770:-|nuORF	REV__ENST00000398083.5_1_20:30450513-30457770:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.25775146484375	2	460.258382	918.502212	1.0736	0.00049414	-1.3501	-0.0006214	-0.27648	-0.00012725	460.25771559583615	34.401	1.1493	34.706	34.447	35.596	0.30494					37	28	2	0	0	0	0.41566	1	2577	2577		56.721	0	1	584210	+		43661	26192	29195	29208	49519	49519					0.039700613149989294
PSSLRLIWNR	10	Unmodified	_PSSLRLIWNR_					0	0	0		ENST00000446344.3_1_16:87733890-87734520:-|nuORF	ENST00000446344.3_1_16:87733890-87734520:-|nuORF	ENST00000446344.3_1_16:87733890-87734520:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.5766296386719	3	414.57529	1240.70404	1.3753	0.00057017	1.7716	0.00073448	3.1469	0.0013046	414.5760045732273	67.506	0.97697	67.891	67.593	68.57	0.38515					46	23	3	0	0	0	0.74383	1	7391	7391		42.338	4.5266	1	218410			43662	11834	29196	29209	49520	49520					0.09331589791213446
PSSNPVSN	8	Unmodified	_PSSNPVSN_					0	0	0		ENSG00000139579|ENST00000267023|NABP2;nc|ENSG00000139579|Q9BQ15-2|NABP2	ENSG00000139579|ENST00000267023|NABP2	ENSG00000139579|ENST00000267023|NABP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.1966857910156	2	401.1905	800.366446	2.7029	0.0010844	4.3468	0.0017439	7.0497	0.0028283	401.1921883819128	82.239	0.92271	82.298	81.766	82.689	0.059166					36	20	2	0	0	0	0.4196	1	8274	8274		38.806	0	1	199460			43663	4380	29197	29210	49521	49521					-0.04172213475806075
PSSRKQQP	8	Unmodified	_PSSRKQQP_					0	0	0			REV__nc|ENSG00000120889|O14763-2|TNFRSF10B	REV__nc|ENSG00000120889|O14763-2|TNFRSF10B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2530822753906	2	464.253966	926.493378	0.59461	0.00027605	-0.68101	-0.00031616	-0.0864	-4.0112E-05	464.25355465849185	81.523	3.0273	81.667	79.894	82.921	0.14352					163	84	3	0	0	0	0.88601	1	7668	7668		34.173	1.3601	1	434730	+		43664	18435	29198	29211	49522	49522					0.027191324691898444
PSSSSLFC	8	Unmodified	_PSSSSLFC_					0	0	0		ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.18310546875	2	414.183829	826.353105	0.3849	0.00015942	-3.0562	-0.0012658	-2.6712	-0.0011064	414.1829219864982	81.936	1.2856	82.362	81.962	83.248	0.42646					77	31	3	0	0	0	0.88915	1	9449	9449		35.201	0	1	2282100			43665	3668	29199	29212	49523	49523					-0.06701787579402207
PSSTSTPSII	10	Unmodified	_PSSTSTPSII_					0	0	0			REV__ENST00000551947.5_1_14:65410101-65410599:+|nuORF	REV__ENST00000551947.5_1_14:65410101-65410599:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2597351074219	2	495.261122	988.507691	1.1508	0.00056992	-3.3281	-0.0016483	-2.1773	-0.0010783	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.80179	1	2741	2741		39.253	0.23134	1	3842700	+		43666	28614	29200	29213	49524	49524					0.0129774010682695
PSSTVSET	8	Unmodified	_PSSTVSET_					0	0	0		ENSG00000225190|ENST00000430334|PLEKHM1;ENST00000582201.5_1_17:62781409-62811241:-|nuORF	ENSG00000225190|ENST00000430334|PLEKHM1	ENSG00000225190|ENST00000430334|PLEKHM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.1700744628906	2	404.190165	806.365778	-0.23776	-9.6101E-05	-4.3707	-0.0017666	-4.6085	-0.0018627	404.1874824179587	77.792	0.40347	78.36	78.098	78.502	0.56836					13	9	2	0	0	0	0.4196	1	8890	8890		27.882	11.409	1	110830			43667	8705	29201	29214	49525	49525					-0.04515052915508022
PSSVPARI	8	Unmodified	_PSSVPARI_					0	0	0		ENST00000545381.5_1_12:27677095-27677155:+|nuORF	ENST00000545381.5_1_12:27677095-27677155:+|nuORF	ENST00000545381.5_1_12:27677095-27677155:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.74322509765625	2	413.742702	825.470852	0.21298	8.8119E-05	1.0909	0.00045136	1.3039	0.00053948	413.7425682094674	30.955	0.56407	30.959	30.71	31.274	0.0037212					26	12	3	0	0	0	0.87064	1	2081	2081		29.15	1.2673	1	187290			43668	13578	29202	29215	49526	49526					0.05113533071573784
PSSVPARI	8	Unmodified	_PSSVPARI_					0	0	0		ENST00000545381.5_1_12:27677095-27677155:+|nuORF	ENST00000545381.5_1_12:27677095-27677155:+|nuORF	ENST00000545381.5_1_12:27677095-27677155:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	413.742702	825.470852	-0.14626	-6.0512E-05	0.2076	8.5892E-05	0.061341	2.538E-05	413.74285605414093	31.009	0.66088	31.089	30.767	31.428	0.079834	0.064992	-0.00030462	NaN	29.15	26	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147880			43669	13578	29202	29215							0.05113533071573784
PSTHCSADP	9	Unmodified	_PSTHCSADP_					0	0	0		ENSG00000049283|ENST00000268933|EPN3;ENST00000512379.5_1_17:48610205-48619515:+|nuORF	ENSG00000049283|ENST00000268933|EPN3	ENSG00000049283|ENST00000268933|EPN3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79296875	2	457.687267	913.359981	-1.3301	-0.00060875	2.3174	0.0010607	0.98737	0.00045191	457.6898745497271	39.345	0.26339	39.9	39.702	39.966	0.55449					6	5	2	0	0	0	0.20789	1	3301	3301		30.504	18.993	1	16063			43670	984	29203	29216	49527	49527					-0.10016474698829825
PSTKAQIPA	9	Unmodified	_PSTKAQIPA_					0	0	0			REV__ENSG00000135744|ENST00000366667|AGT	REV__ENSG00000135744|ENST00000366667|AGT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3010559082031	2	456.761092	911.507631	-0.11128	-5.0829E-05	0.023634	1.0795E-05	-0.087648	-4.0034E-05	456.76107230877915	35.172	0.66771	35.16	34.849	35.517	-0.012199					29	16	2	0	0	0	0.20789	1	2187	2187		26.693	0	1	68064	+		43671	19244	29204	29217	49528	49528					0.048337848974597364
PSTKPLLVRV	10	Unmodified	_PSTKPLLVRV_					0	0	0			REV__ENST00000312655.8_1_17:57430604-57430868:+|nuORF	REV__ENST00000312655.8_1_17:57430604-57430868:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.3528442382812	2	555.355691	1108.69683	-0.86355	-0.00047958	-3.4797	-0.0019325	-4.3433	-0.0024121	555.3536421650435	101.16	2.3681	101.19	100.7	103.07	0.031036					166	56	5	0	0	0	0.86218	1	10877	10877		32.812	3.6629	1	6361400	+		43672	24916	29205	29218	49529	49529					0.14682857190791765
PSTNLQSNS	9	Unmodified	_PSTNLQSNS_					0	0	0		nc|ENSG00000055917|Q8TB72-2|PUM2;ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2	nc|ENSG00000055917|Q8TB72-2|PUM2	nc|ENSG00000055917|Q8TB72-2|PUM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	474.2230529785156	2	474.225071	946.435589	-0.93694	-0.00044432	-3.9395	-0.0018682	-4.8764	-0.0023125	474.2235736809941	68.894	0.63741	69.03	68.782	69.419	0.13521					61	28	3	0	0	0	0.77696	1	6220	6220		31.53	1.0262	1	348720			43673	1030	29206	29219	49530	49530					-0.039771742468929006
PSTPPVDP	8	Unmodified	_PSTPPVDP_					0	0	0			REV__ENSG00000137825|ENST00000260386|ITPKA	REV__ENSG00000137825|ENST00000260386|ITPKA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.7182922363281	2	405.205618	808.396684	-0.37365	-0.0001514	-1.5757	-0.00063848	-1.9494	-0.00078989	405.2050364955442	75.486	1.6492	75.44	74.303	75.953	-0.045975					69	46	2	0	0	0	0.4196	1	7356	7356		31.955	0	1	45847	+		43674	19414	29207	29220	49531	49531					-0.0151785481062916
PSTRASAH	8	Unmodified	_PSTRASAH_					0	0	0		ENST00000545177.4_1_6:2855770-2876551:-|nuORF	ENST00000545177.4_1_6:2855770-2876551:-|nuORF	ENST00000545177.4_1_6:2855770-2876551:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.19384765625	2	413.711934	825.409314	0.28733	0.00011887	-4.3088	-0.0017826	-4.0214	-0.0016637	413.70883878149533	83.589	0.25443	84.024	83.918	84.172	0.43538					7	5	2	0	0	0	0.4196	1	9693	9693		32.812	4.9302	1	34139			43675	13574	29208	29221	49532	49532					-0.010373986277272707
PSTRIHLQYH	10	Unmodified	_PSTRIHLQYH_					0	0	0			REV__ENSG00000086570|ENST00000261800|FAT2	REV__ENSG00000086570|ENST00000261800|FAT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3327026367188	2	626.333279	1250.652	-0.96726	-0.00060583	0.24106	0.00015098	-0.7262	-0.00045484	626.3333261036785	43.059	0.81004	43.023	42.595	43.405	-0.035816					50	18	4	0	0	0	0.47072	1	3350	3350		45.972	0	1	287350	+		43676	16912	29209	29222	49533	49533					0.036704263774709034
PSTRIHLQYH	10	Unmodified	_PSTRIHLQYH_					0	0	0			REV__ENSG00000086570|ENST00000261800|FAT2	REV__ENSG00000086570|ENST00000261800|FAT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3339233398438	2	626.333279	1250.652	-0.6713	-0.00042046	-0.060856	-3.8116E-05	-0.73215	-0.00045857	626.3330596948049	43.058	0.73404	43.058	42.724	43.458	0.00016785					42	16	4	0	0	0	0.85692	1	3274	3274		31.53	9.5699	1	337190	+		43677	16912	29209	29222	49534	49534					0.036704263774709034
PSTTVDASR	9	Unmodified	_PSTTVDASR_					0	0	0			REV__ENST00000493467.5_1_9:135785858-135804259:-|nuORF	REV__ENST00000493467.5_1_9:135785858-135804259:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.23370361328125	2	467.235439	932.456324	-0.63924	-0.00029868	-3.9625	-0.0018514	-4.6018	-0.0021501	467.2335443561671	68.394	1.2899	68.358	67.994	69.284	-0.036301					131	48	4	0	0	0	0.76764	1	6642	6642		34.173	5.023	1	1309700	+		43678	21208	29210	29223	49535	49535					-0.012605838672357095
PSTVLLIGL	9	Unmodified	_PSTVLLIGL_					0	0	0			REV__ENST00000472488.5_1_1:160085570-160106822:+|nuORF	REV__ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79315185546875	2	456.791861	911.569169	-0.042653	-1.9484E-05	2.8269	0.0012913	2.7842	0.0012718	456.79307389883803	36.432	2.1584	36.413	35.42	37.578	-0.018673					171	47	5	0	0	0	0.43338	1	2404	2404		55.504	7.5886	1	4460800	+		43679	27261	29211	29224	49536	49536					0.10984716596760791
PSTVLLIGL	9	Unmodified	_PSTVLLIGL_					0	0	0			REV__ENST00000472488.5_1_1:160085570-160106822:+|nuORF	REV__ENST00000472488.5_1_1:160085570-160106822:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7926330566406	2	456.791861	911.569169	0.14837	6.7774E-05	2.6615	0.0012157	2.8099	0.0012835	456.79297860960025	37.636	1.5872	38.122	37.704	39.291	0.48581					149	39	5	0	0	0	0.58151	1	3082	3082		47.916	0	1	8942200	+		43680	27261	29211	29224	49537	49537					0.10984716596760791
PSVAKKIA	8	Unmodified	_PSVAKKIA_					0	0	0		ENSG00000137561|ENST00000260116|TTPA	ENSG00000137561|ENST00000260116|TTPA	ENSG00000137561|ENST00000260116|TTPA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.2654724121094	2	407.263271	812.511988	0.90913	0.00037025	3.2583	0.001327	4.1674	0.0016972	407.2644921046508	37.981	1.0236	38.294	38.055	39.079	0.31312					54	25	3	0	0	0	0.8347	1	3101	3101		23.042	2.0956	1	1112800			43681	4212	29212	29225	49538	49538					0.09823294111026826
PSVAVRRLN	9	Unmodified	_PSVAVRRLN_					0	0	0		ENST00000597029.5_1_19:50430962-50431100:-|nuORF;ENST00000596022.5_3_19:50430962-50432707:-|nuORF;ENST00000597723.5_1_19:50430959-50432619:-|nuORF	ENST00000597029.5_1_19:50430962-50431100:-|nuORF	ENST00000597029.5_1_19:50430962-50431100:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.30841064453125	2	506.306532	1010.59851	0.26704	0.0001352	3.7417	0.0018945	4.0087	0.0020297	506.30835501628917	44.614	1.9662	44.591	43.729	45.696	-0.023079					64	45	2	0	0	0	0.69624	1	3433	3433		40.778	8.8233	1	414870			43682	14331	29213	29226	49539	49539					0.0936367366560944
PSVDIDAHT	9	Unmodified	_PSVDIDAHT_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;ENST00000506930.2_1_5:139884419-139889237:+|nuORF	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	477.7284240722656	2	477.729989	953.445425	0.75595	0.00036114	-3.5545	-0.0016981	-2.7985	-0.0013369	477.7281767160498	97.974	1.0146	98.134	97.668	98.683	0.16073					48	22	3	0	0	0	0.74721	1	10180	10180		37.159	1.5408	1	430400			43683	14916	29214	29227	49540	49540					-0.03315986241511837
PSVGWGTTD	9	Unmodified	_PSVGWGTTD_					0	0	0			REV__ENST00000566749.5_1_16:30094185-30096380:+|nuORF	REV__ENST00000566749.5_1_16:30094185-30096380:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.2142333984375	2	460.211432	918.408311	1.4166	0.00065195	3.9366	0.0018117	5.3533	0.0024636	460.21371182580657	107.11	0.79639	107.22	106.86	107.65	0.10396					90	28	5	0	0	0	0.76255	1	13040	13040		35.618	0.41757	1	1570100	+		43684	20196	29215	29228	49541	49541					-0.054156577872845446
PSVIASLLI	9	Unmodified	_PSVIASLLI_					0	0	0		ENST00000594286.5_1_19:53619136-53625671:-|nuORF	ENST00000594286.5_1_19:53619136-53625671:-|nuORF	ENST00000594286.5_1_19:53619136-53625671:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7908020019531	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.7932	1	3867	3867		23.042	0	1	186860			43685	14316	29216	29229	49542	49542					0.10984716596760791
PSVIVGIVV	9	Unmodified	_PSVIVGIVV_					0	0	0		nc|ENSG00000137491|O94956-4|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1;ENSG00000137491|ENST00000289575|SLCO2B1;ENST00000531756.5_1_11:74862426-74914042:+|nuORF;nc|ENSG00000137491|O94956-2|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	nc|ENSG00000137491|O94956-4|SLCO2B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7879638671875	2	441.786579	881.558604	-0.54459	-0.00024059	3.5319	0.0015603	2.9873	0.0013197	441.7881167581505	37.981	2.8453	38.294	37.083	39.929	0.31312					193	69	5	0	0	0	0.7932	1	3207	3207		18.324	0.95945	1	61531000			43686	4203	29217	29230	49543	49543					0.11308733942325944
PSVLGTPLL	9	Unmodified	_PSVLGTPLL_					0	0	0		ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.7781066894531	2	448.776211	895.537869	-0.17419	-7.8172E-05	2.3307	0.001046	2.1565	0.00096779	448.77710905319276	42.805	1.4607	42.755	42.147	43.608	-0.050308					82	39	3	0	0	0	0.72402	1	2945	2945		38.806	6.8513	1	258910			43687	4102	29218	29231	49544	49544					0.08592143562668753
PSVLGTPLL	9	Unmodified	_PSVLGTPLL_					0	0	0		ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	448.776211	895.537869	-1.8411	-0.00082626	3.8593	0.001732	2.0182	0.0009057	448.77774874321494	42.795	1.9359	42.795	41.808	43.744	0	-0.12797	0.0010856	NaN	38.806	92	47	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199600			43688	4102	29218	29231							0.08592143562668753
PSVLGTPLL	9	Unmodified	_PSVLGTPLL_					0	0	0		ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	448.776211	895.537869	-1.1254	-0.00050506	2.6884	0.0012065	1.563	0.00070143	448.77728303951056	42.988	2.0952	42.952	41.858	43.953	-0.035816	0.0292	3.467E-05	NaN	38.806	102	49	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	216470			43689	4102	29218	29231							0.08592143562668753
PSVLGTPLL	9	Unmodified	_PSVLGTPLL_					0	0	0		ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	448.776211	895.537869	-1.3683	-0.00061405	3.6798	0.0016514	2.3116	0.0010374	448.77765749226734	42.904	1.733	42.91	42.067	43.8	0.0057526	-0.013196	0.00092453	NaN	38.806	93	47	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	251390			43690	4102	29218	29231							0.08592143562668753
PSVLGTPLL	9	Unmodified	_PSVLGTPLL_					0	0	0		ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	448.776211	895.537869	0.22943	0.00010296	2.1224	0.00095248	2.3518	0.0010554	448.7769924771268	42.724	1.9014	42.789	42.073	43.975	0.065037	-0.1343	-0.00047335	NaN	38.806	105	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	298770			43691	4102	29218	29231							0.08592143562668753
PSVLGTPLL	9	Unmodified	_PSVLGTPLL_					0	0	0		ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	ENSG00000136274|ENST00000490531|NACAD	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	448.776211	895.537869	-1.6793	-0.00075365	3.1262	0.001403	1.4469	0.00064933	448.77739769057507	42.263	1.1503	42.96	42.272	43.422	0.69754	0.037313	0.00042764	NaN	38.806	44	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	265290			43692	4102	29218	29231							0.08592143562668753
PSVLLALLT	9	Unmodified	_PSVLLALLT_					0	0	0			REV__ENSG00000143162|ENST00000370509|CREG1	REV__ENSG00000143162|ENST00000370509|CREG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8013610839844	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.7932	1	3726	3726		16.473	2.6978	1	269820	+		43693	19777	29219	29232	49545	49545					0.11905003113804469
PSVLLLLLLLR	11	Unmodified	_PSVLLLLLLLR_					0	0	0		ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.4336547851562	2	625.433941	1248.85333	0.89312	0.00055859	-4.3604	-0.0027271	-3.4673	-0.0021685	625.43101086713	108.79	0.63013	108.82	108.61	109.24	0.034355					76	30	3	0	0	0	0.80593	1	11944	11944		2.9294	0	1	3022200			43694	4570	29220	29233	49546	49546					0.2388572236127402
PSVLLSLF	8	Unmodified	_PSVLLSLF_					0	0	0			REV__chr11:65171499-65172246|19|130.63|0.03|12.21|+|2|SPDYC,SPDYC|1	REV__chr11:65171499-65172246|19|130.63|0.03|12.21|+|2|SPDYC,SPDYC|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2618408203125	2	438.265479	874.516405	-1.3297	-0.00058278	-3.1294	-0.0013715	-4.4591	-0.0019543	438.2640159596406	58.026	1.8731	58.42	57.697	59.57	0.39407					78	45	2	0	0	0	0.85277	1	6083	6083		25.45	0	1	1391400	+		43695	15500	29221	29234	49547	49547					0.07412758533951092
PSVLLTGLL	9	Unmodified	_PSVLLTGLL_					0	0	0			REV__ENSG00000171522|ENST00000302472|PTGER4	REV__ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7915344238281	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.7932	1	2981	2981		17.365	0	1	759950	+		43696	21745	29222	29235	49548	49548					0.10984716596760791
PSVLLTGLL	9	Unmodified	_PSVLLTGLL_					0	0	0			REV__ENSG00000171522|ENST00000302472|PTGER4	REV__ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7917175292969	2	456.791861	911.569169	0.10619	4.8505E-05	2.6551	0.0012128	2.7613	0.0012614	456.7929673289598	38.995	1.2001	38.965	38.494	39.694	-0.03027					96	27	4	0	0	0	0.78536	1	2768	2768		29.15	0	1	2198500	+		43697	21745	29222	29235	49549	49549					0.10984716596760791
PSVLLTGLL	9	Unmodified	_PSVLLTGLL_					0	0	0			REV__ENSG00000171522|ENST00000302472|PTGER4	REV__ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79217529296875	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.78536	1	3196	3196		29.15	0	1	652510	+		43698	21745	29222	29235	49550	49550					0.10984716596760791
PSVLLTGLL	9	Unmodified	_PSVLLTGLL_					0	0	0			REV__ENSG00000171522|ENST00000302472|PTGER4	REV__ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7911682128906	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.74721	1	3263	3263		37.159	3.6435	1	608260	+		43699	21745	29222	29235	49551	49551					0.10984716596760791
PSVLLTGLL	9	Unmodified	_PSVLLTGLL_					0	0	0			REV__ENSG00000171522|ENST00000302472|PTGER4	REV__ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7912292480469	2	456.791861	911.569169	0.30037	0.00013721	2.5195	0.0011509	2.8199	0.0012881	456.79289757972145	49.9	2.3678	49.942	48.602	50.969	0.04224					107	64	2	0	0	0	0.78536	1	3794	3794		29.15	3.6994	1	208080	+		43700	21745	29222	29235	49552	49552					0.10984716596760791
PSVLLTGLL	9	Unmodified	_PSVLLTGLL_					0	0	0			REV__ENSG00000171522|ENST00000302472|PTGER4	REV__ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79248046875	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.78058	1	2875	2875		30.504	0	1	605230	+		43701	21745	29222	29235	49553	49553					0.10984716596760791
PSVLLTGLL	9	Unmodified	_PSVLLTGLL_					0	0	0			REV__ENSG00000171522|ENST00000302472|PTGER4	REV__ENSG00000171522|ENST00000302472|PTGER4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7900695800781	2	456.791861	911.569169	-0.27328	-0.00012483	2.9008	0.0013251	2.6275	0.0012002	456.79291204486344	46.231	0.96013	46.152	45.759	46.72	-0.079002					46	26	3	0	0	0	0.7932	1	3369	3369		21.96	5.4867	1	152910	+		43702	21745	29222	29235	49554	49554					0.10984716596760791
PSVLRAVIPP	10	Unmodified	_PSVLRAVIPP_					0	0	0		ENST00000395784.1_1_5:96271114-96272330:+|nuORF	ENST00000395784.1_1_5:96271114-96272330:+|nuORF	ENST00000395784.1_1_5:96271114-96272330:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8267822265625	2	524.829309	1047.64407	-0.59499	-0.00031227	-2.9841	-0.0015662	-3.5791	-0.0018784	524.8275943455435	102.47	0.70876	102.47	102.25	102.96	0					43	17	3	0	0	0	0.77314	1	10468	10468		40.778	5.1599	1	339820			43703	11099	29223	29236	49555	49555					0.12214899127980061
PSVLRAVIPP	10	Unmodified	_PSVLRAVIPP_					0	0	0		ENST00000395784.1_1_5:96271114-96272330:+|nuORF	ENST00000395784.1_1_5:96271114-96272330:+|nuORF	ENST00000395784.1_1_5:96271114-96272330:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8272094726562	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.86218	1	10435	10435		32.812	0.85756	1	23918000			43704	11099	29223	29236	49556	49556					0.12214899127980061
PSVNQRIN	8	Unmodified	_PSVNQRIN_					0	0	0		nc|ENSG00000081189|Q06413-4|MEF2C;nc|ENSG00000081189|Q06413-6|MEF2C;nc|ENSG00000081189|Q06413-2|MEF2C;nc|ENSG00000081189|Q06413-5|MEF2C	nc|ENSG00000081189|Q06413-4|MEF2C	nc|ENSG00000081189|Q06413-4|MEF2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2536315917969	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.89494	1	8303	8303		37.159	0	1	1482000			43705	14789	29224	29237	49557	49557					0.027191324691898444
PSVPCIFC	8	Unmodified	_PSVPCIFC_					0	0	0		ENSG00000198839|ENST00000361822|ZNF277	ENSG00000198839|ENST00000361822|ZNF277	ENSG00000198839|ENST00000361822|ZNF277	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.25604248046875	2	433.200967	864.387382	0.73491	0.00031837	-1.3874	-0.00060103	-0.6525	-0.00028267	433.2002116022823	107.14	0.383	107.23	107.04	107.42	0.091263					14	9	2	0	0	0	0.4196	1	11512	11512		37.028	10.232	1	103130			43706	8349	29225	29238	49558	49558					-0.050236626921559946
PSVPLVLLL	9	Unmodified	_PSVPLVLLL_					0	0	0		nc|ENSG00000197487|Q9UBC7-2|GALP;chr19:56177195-56182172|16|20.94|0.07|8.27|+|ENST00000590002|GALP,GALP;ENSG00000197487|ENST00000357330|GALP	nc|ENSG00000197487|Q9UBC7-2|GALP	nc|ENSG00000197487|Q9UBC7-2|GALP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	475.8194274902344	2	475.817879	949.621205	-1.7705	-0.00084244	3.3194	0.0015794	1.5488	0.00073697	475.8196247358917	39.531	1.3725	39.531	38.941	40.314	0					55	33	3	0	0	0	0.7932	1	2504	2504		17.365	0	1	82988			43707	294	29226	29239	49559	49559					0.1443788001053008
PSVPPAPPGVP	11	Unmodified	_PSVPPAPPGVP_					0	0	0		ENST00000565396.5_1_16:2052722-2053019:-|nuORF	ENST00000565396.5_1_16:2052722-2053019:-|nuORF	ENST00000565396.5_1_16:2052722-2053019:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.7837829589844	2	507.784567	1013.55458	-1.7124	-0.00086954	-2.429	-0.0012334	-4.1414	-0.002103	507.78325307714454	32.01	0.63246	32.01	31.823	32.456	0					41	23	3	0	0	0	0.72228	1	1585	1585		27.882	2.3082	1	92283			43708	13911	29227	29240	49560	49560					0.04834644448612835
PSVPSPVSLS	10	Unmodified	_PSVPSPVSLS_					0	0	0		ENSG00000250571|ENST00000340042|GLI4;ENST00000519876.1_1_8:144351566-144355345:+|nuORF	ENSG00000250571|ENST00000340042|GLI4	ENSG00000250571|ENST00000340042|GLI4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2829895019531	2	485.266207	968.517862	-0.8809	-0.00042747	-1.7168	-0.00083312	-2.5977	-0.0012606	485.26525209052494	43.295	1.2543	43.728	43.419	44.674	0.4334					80	30	5	0	0	0	0.37624	1	3963	3963		39.253	0	1	9714800			43709	8848	29228	29241	49561	49561					0.032343478320512986
PSVRPLLLRT	10	Unmodified	_PSVRPLLLRT_					0	0	0		ENSG00000101974|ENST00000682941|ATP11C;nc|ENSG00000101974|Q8NB49|ATP11C;ENST00000460773.5_1_X:138813815-138814653:-|nuORF	ENSG00000101974|ENST00000682941|ATP11C	ENSG00000101974|ENST00000682941|ATP11C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3693237304688	2	576.36659	1150.71863	0.21884	0.00012613	3.6231	0.0020883	3.842	0.0022144	576.3685004407081	43.385	1.6048	43.335	42.606	44.211	-0.050308					89	39	3	0	0	0	0.8486	1	2999	2999		18.262	0.89712	1	327130			43710	1976	29229	29242	49562	49562					0.14929661939368088
PSVSAWNKPLT	11	Unmodified	_PSVSAWNKPLT_					0	0	0		nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;ENSG00000117523|ENST00000647382|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.3250732421875	2	600.324588	1198.63462	-0.18991	-0.00011401	-0.93114	-0.00055898	-1.121	-0.00067299	600.3238493032328	110.54	1.5294	110.54	110.28	111.81	0					121	48	3	0	0	0	0.74763	1	11592	11592		22.58	0.61977	1	894450			43711	2984	29230	29243	49563	49563					0.043250860517900946
PSVSAYPRSL	10	Unmodified	_PSVSAYPRSL_					0	0	0			REV__ENSG00000111249|ENST00000261726|CUX2	REV__ENSG00000111249|ENST00000261726|CUX2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3269653320312	2	538.790381	1075.56621	0.84021	0.0004527	0.84508	0.00045532	1.6853	0.00090802	538.7911333818237	100.97	0.43669	101.11	100.77	101.21	0.14352					12	10	2	0	0	0	0.37624	1	10560	10560		22.58	6.1065	1	248570	+		43712	17854	29231	29244	49564	49564					0.03144841471953441
PSVTEEKNME	10	Oxidation (M)	_PSVTEEKNM(Oxidation (M))E_		PSVTEEKNM(1)E		PSVTEEKNM(96)E	0	0	1		ENSG00000169857|ENST00000306730|AVEN	ENSG00000169857|ENST00000306730|AVEN	ENSG00000169857|ENST00000306730|AVEN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.2639770507812	2	590.263536	1178.51252	0.086308	5.0945E-05	0.68029	0.00040155	0.76659	0.00045249	590.2638249232199	82.298	1.0209	82.772	82.355	83.376	0.47383					73	24	4	0	0	0	0.14384	1	9530	9530		95.815	26.188	1	3517700			43713	6531	29232	29245	49565	49565		110			-0.06959743812717534
PSVTPLATLI	10	Unmodified	_PSVTPLATLI_					0	0	0		nc|ENSG00000159063|Q9BVK2-2|ALG8;ENSG00000159063|ENST00000299626|ALG8;ENST00000532552.2_1_11:77817934-77820625:-|nuORF	nc|ENSG00000159063|Q9BVK2-2|ALG8	nc|ENSG00000159063|Q9BVK2-2|ALG8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.3079833984375	2	506.307875	1010.6012	0.23118	0.00011705	1.443	0.00073062	1.6742	0.00084767	506.3084380908709	39.786	1.6578	39.756	38.941	40.599	-0.03027					63	41	2	0	0	0	0.74274	1	2780	2780		42.396	11.892	1	112630			43714	5508	29233	29246	49566	49566					0.09632084279917308
PSVTPLATLI	10	Unmodified	_PSVTPLATLI_					0	0	0		nc|ENSG00000159063|Q9BVK2-2|ALG8;ENSG00000159063|ENST00000299626|ALG8;ENST00000532552.2_1_11:77817934-77820625:-|nuORF	nc|ENSG00000159063|Q9BVK2-2|ALG8	nc|ENSG00000159063|Q9BVK2-2|ALG8	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	506.307875	1010.6012	-1.1173	-0.00056567	3.1798	0.00161	2.0626	0.0010443	506.3094009229767	39.624	1.765	39.58	38.74	40.505	-0.043697	0.045206	-3.4656E-05	NaN	42.396	82	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93842			43715	5508	29233	29246							0.09632084279917308
PSVTSIPVIV	10	Unmodified	_PSVTSIPVIV_					0	0	0		ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3079528808594	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.598	1	55.571	55.071	56.071	-0.027279								0	0	0	0.45132	1	5069	5069		32.812	4.9302	1				43716	1962	29234	29247	49567	49567					0.09632084279905939
PSVTSIPVIV	10	Unmodified	_PSVTSIPVIV_					0	0	0		ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3075256347656	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.773	1	52.814	52.314	53.314	0.040592								0	0	0	0.45132	1	4277	4277		27.882	2.4321	1				43717	1962	29234	29247	49568	49568					0.09632084279905939
PSVTSIPVIV	10	Unmodified	_PSVTSIPVIV_					0	0	0		ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3070983886719	2	506.307875	1010.6012	0.29899	0.00015138	1.2838	0.00065	1.5828	0.00080139	506.3084880553604	44.091	1.7417	44.143	43.633	45.375	0.051537					61	41	3	0	0	0	0.8608	1	3062	3062		34.173	4.331	1	407010			43718	1962	29234	29247	49569	49569					0.09632084279905939
PSVTSIPVIV	10	Unmodified	_PSVTSIPVIV_					0	0	0		ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.311279296875	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.038	1	55.129	54.629	55.629	0.091167								0	0	0	0.45132	1	4588	4588		27.882	1.0861	1				43719	1962	29234	29247	49570	49570					0.09632084279905939
PSWRVYTETWR	11	Unmodified	_PSWRVYTETWR_					0	0	0			REV__ENSG00000106263|ENST00000360876|EIF3B	REV__ENSG00000106263|ENST00000360876|EIF3B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3005676269531	3	494.249242	1479.7259	-0.69028	-0.00034117	3.7003	0.0018288	3.01	0.0014877	494.25070057558645	97.285	0.28507	97.333	97.211	97.496	0.048157					9	6	2	0	0	0	0.17925	1	10360	10360		20.315	6.229	1	115370	+		43720	17603	29235	29248	49571	49571					0.005223497491215312
PTAEVLLSA	9	Unmodified	_PTAEVLLSA_					0	0	0		ENSG00000168612|ENST00000372523|ZSWIM1	ENSG00000168612|ENST00000372523|ZSWIM1	ENSG00000168612|ENST00000372523|ZSWIM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7544860839844	2	450.755475	899.496398	-0.14135	-6.3713E-05	-2.6678	-0.0012025	-2.8092	-0.0012662	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.76764	1	8014	8014		34.173	0.67956	1	337080			43721	6417	29236	29249	49572	49572					0.042629628033296285
PTAFKPVLPKP	11	Unmodified	_PTAFKPVLPKP_					0	0	0		ENSG00000107816|ENST00000454422|LZTS2	ENSG00000107816|ENST00000454422|LZTS2	ENSG00000107816|ENST00000454422|LZTS2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.606689453125	2	597.865892	1193.71723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.898	1	57.003	56.503	57.503	0.1055								0	0	0	0.56276	1	4807	4807		24.519	0.99649	1				43722	2372	29237	29250	49573	49573					0.12812027850600316
PTAGHLLPLL	10	Unmodified	_PTAGHLLPLL_					0	0	0		ENSG00000204913|ENST00000377924|LRRC3C	ENSG00000204913|ENST00000377924|LRRC3C	ENSG00000204913|ENST00000377924|LRRC3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3071899414062	2	516.316035	1030.61752	-1.5618	-0.00080641	-1.9285	-0.00099572	-3.4904	-0.0018021	516.3150957405047	104.49	1.3659	104.58	103.75	105.11	0.093857					78	33	3	0	0	0	0.86589	1	10962	10962		29.15	0	1	982800			43723	8496	29238	29251	49574	49574					0.10343210236646883
PTAKRGLGGG	10	Unmodified	_PTAKRGLGGG_					0	0	0			REV__ENSG00000100425|ENST00000404760|BRD1	REV__ENSG00000100425|ENST00000404760|BRD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.26409912109375	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.84112	1	7571	7571		37.159	1.9584	1	2957200	+		43724	17193	29239	29252	49575	49575					0.054357228488811415
PTAPCKQRMSH	11	Unmodified	_PTAPCKQRMSH_					0	0	0			REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.5511169433594	3	419.205992	1254.59615	0.57	0.00023895	0.31522	0.00013214	0.88522	0.00037109	419.20592724714464	29.533	0.47267	29.444	29.191	29.663	-0.089546					15	10	2	0	0	0	0.17567	1	1907	1907		24.276	7.7461	1	87067	+		43725	27305	29240	29253	49576	49576					-0.020968661260212684
PTAPCKQRMSH	11	Unmodified	_PTAPCKQRMSH_					0	0	0			REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	419.205992	1254.59615	-2.0407	-0.00085545	4.7174	0.0019776	2.6768	0.0011221	419.2078515774731	29.105	0.33116	29.105	28.894	29.225	0	-0.064122	0.0035088	NaN	24.276	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39093	+		43726	27305	29240	29253							-0.020968661260212684
PTAPCKQRMSH	11	Unmodified	_PTAPCKQRMSH_					0	0	0			REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	419.205992	1254.59615	0.24966	0.00010466	2.369	0.00099311	2.6187	0.0010978	419.2069943449586	29.165	0.36981	29.196	28.873	29.243	0.030945	0.026885	0.00055538	NaN	24.276	27	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27595	+		43727	27305	29240	29253							-0.020968661260212684
PTAPCKQRMSH	11	Unmodified	_PTAPCKQRMSH_					0	0	0			REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	419.205992	1254.59615	-0.34577	-0.00014495	2.9266	0.0012268	2.5808	0.0010819	419.2071163245563	29.183	0.3593	29.14	28.877	29.236	-0.043093	-0.028501	0.0012566	NaN	24.276	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20888	+		43728	27305	29240	29253							-0.020968661260212684
PTAPCKQRMSH	11	Unmodified	_PTAPCKQRMSH_					0	0	0			REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	419.205992	1254.59615	2.7467	0.0011514	-0.18614	-7.8029E-05	2.5606	0.0010734	419.2058541402262	29.176	0.35956	29.156	28.961	29.321	-0.019405	-0.012468	-0.002658	NaN	24.276	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21345	+		43729	27305	29240	29253							-0.020968661260212684
PTAPCKQRMSH	11	Unmodified	_PTAPCKQRMSH_					0	0	0			REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	419.205992	1254.59615	0.084766	3.5535E-05	2.6881	0.0011269	2.7728	0.0011624	419.2068976845139	28.777	0.093102	28.89	28.83	28.923	0.11225	-0.27905	0.00095663	NaN	24.276	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43239	+		43730	27305	29240	29253							-0.020968661260212684
PTAPCKQRMSH	11	Unmodified	_PTAPCKQRMSH_					0	0	0			REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	REV__ENST00000474490.1_1_3:139236319-139236406:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	419.205992	1254.59615	-0.3598	-0.00015083	0.89858	0.00037669	0.53878	0.00022586	419.2063210546596	29.28	0.4766	29.251	29.084	29.56	-0.029207	0.082295	-0.0012939	NaN	24.276	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105000	+		43731	27305	29240	29253							-0.020968661260212684
PTAYVPKKGQ	10	Unmodified	_PTAYVPKKGQ_					0	0	0		ENST00000330688.8_1_3:25470089-25470179:+|nuORF	ENST00000330688.8_1_3:25470089-25470179:+|nuORF	ENST00000330688.8_1_3:25470089-25470179:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.8068237304688	2	544.808574	1087.60259	0.026613	1.4499E-05	-3.8164	-0.0020792	-3.7898	-0.0020647	544.8064273929182	24.934	1.2168	24.992	24.613	25.83	0.058189					124	57	4	0	0	0	0.18173	3	884	884;901;907		90.37	14.405	1	915340			43732	10113	29241	29254	49577;49578;49579	49577					0.062297183686723656
PTAYVPKKGQ	10	Unmodified	_PTAYVPKKGQ_					0	0	0		ENST00000330688.8_1_3:25470089-25470179:+|nuORF	ENST00000330688.8_1_3:25470089-25470179:+|nuORF	ENST00000330688.8_1_3:25470089-25470179:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	544.8064575195312	2	544.808574	1087.60259	0.78335	0.00042678	-4.4681	-0.0024342	-3.6847	-0.0020075	544.8060162221166	24.686	0.87633	24.7	24.336	25.212	0.013996					110	42	4	0	0	0	0.18173	2	851	851;865		90.37	7.6193	1	1007500			43733	10113	29241	29254	49580;49581	49580					0.062297183686723656
PTDASALSVT	10	Unmodified	_PTDASALSVT_					0	0	0		ENST00000339924.12_2_19:55344219-55358662:+|nuORF	ENST00000339924.12_2_19:55344219-55358662:+|nuORF	ENST00000339924.12_2_19:55344219-55358662:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.24591064453125	2	481.245472	960.476391	-0.28493	-0.00013712	0.39871	0.00019188	0.11378	5.4758E-05	481.2455876545853	21.634	0.56738	21.57	21.308	21.875	-0.064743					27	17	2	0	0	0	0.6116	1	629	629		49.442	7.0454	1	42453			43734	10227	29242	29255	49582	49582					-0.005428329272717747
PTDASALSVT	10	Unmodified	_PTDASALSVT_					0	0	0		ENST00000339924.12_2_19:55344219-55358662:+|nuORF	ENST00000339924.12_2_19:55344219-55358662:+|nuORF	ENST00000339924.12_2_19:55344219-55358662:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	481.245472	960.476391	0.69401	0.00033399	-2.2432	-0.0010795	-1.5492	-0.00074556	481.24415850955603	21.39	0.095871	21.374	21.329	21.425	-0.016428	-0.11452	-0.0028383	NaN	49.442	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24841			43735	10227	29242	29255							-0.005428329272717747
PTDIIRVLLP	10	Unmodified	_PTDIIRVLLP_					0	0	0			REV__nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	REV__nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8540649414062	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.85694	1	10660	10660		21.96	0	1	34546000	+		43736	17270	29243	29256	49583	49583					0.1340743747093711
PTDIIRVLLP	10	Unmodified	_PTDIIRVLLP_					0	0	0			REV__nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	REV__nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8533935546875	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.74274	1	10928	10928		42.396	3.1433	1	50786000	+		43737	17270	29243	29256	49584	49584					0.1340743747093711
PTDLPSPCPL	10	Unmodified	_PTDLPSPCPL_					0	0	0		ENST00000422956.6_1_2:114016893-114020997:+|nuORF	ENST00000422956.6_1_2:114016893-114020997:+|nuORF	ENST00000422956.6_1_2:114016893-114020997:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.801513671875	2	520.260068	1038.50558	-0.65096	-0.00033867	-3.2773	-0.0017051	-3.9283	-0.0020437	520.258174498918	86.654	0.65114	87.108	86.775	87.426	0.45429					25	15	2	0	0	0	0.37624	1	10199	10199		40.778	3.6191	1	335530			43738	11491	29244	29257	49585	49585					-0.012130119026551256
PTECMECYPLE	11	Unmodified	_PTECMECYPLE_					0	0	0			REV__nc|ENSG00000121988|Q5FWF4-2|ZRANB3	REV__nc|ENSG00000121988|Q5FWF4-2|ZRANB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.84234619140625	3	438.839875	1313.4978	2.2055	0.00096786	3.2642	0.0014325	5.4697	0.0024003	438.84126908169253	26.687	0.71917	26.347	26.051	26.77	-0.34035					46	15	4	0	0	0	0.67762	2	1482	1482;1508		35.178	8.5185	1	498930	+		43739	18475	29245	29258	49586;49587	49586					-0.146412752767219
PTEDLRRRIFF	11	Unmodified	_PTEDLRRRIFF_					0	0	0			REV__ENSG00000119927|ENST00000348367|GPAM	REV__ENSG00000119927|ENST00000348367|GPAM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.9358215332031	3	483.936887	1448.78883	0.29283	0.00014171	-1.4405	-0.00069712	-1.1477	-0.00055541	483.93614911946725	42.975	1.1574	42.945	42.605	43.763	-0.029461					80	27	4	0	0	0	0.6493	1	3234	3234		38.754	16.192	1	1754600	+		43740	18387	29246	29259	49588	49588					0.08238915537140201
PTEDLRRRIFF	11	Unmodified	_PTEDLRRRIFF_					0	0	0			REV__ENSG00000119927|ENST00000348367|GPAM	REV__ENSG00000119927|ENST00000348367|GPAM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.93597412109375	3	483.936887	1448.78883	-1.0481	-0.00050723	-0.058824	-2.8467E-05	-1.107	-0.0005357	483.93680675261817	43.021	1.2673	42.985	42.56	43.828	-0.035816					88	29	5	0	0	0	0.6493	2	3354	3342;3354		38.754	18.723	1	1751300	+		43741	18387	29246	29259	49589;49590	49590					0.08238915537140201
PTEDLRRRIFF	11	Unmodified	_PTEDLRRRIFF_					0	0	0			REV__ENSG00000119927|ENST00000348367|GPAM	REV__ENSG00000119927|ENST00000348367|GPAM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.93597412109375	3	483.936887	1448.78883	-2.3425	-0.0011336	1.056	0.00051104	-1.2865	-0.00062261	483.9373455277064	43.019	1.1728	43.02	42.643	43.816	0.00017166					80	27	4	0	0	0	0.66009	2	3268	3256;3268		37.508	6.9393	1	1767600	+		43742	18387	29246	29259	49591;49592	49592					0.08238915537140201
PTEEKASL	8	Unmodified	_PTEEKASL_					0	0	0			REV__ENSG00000134802|ENST00000395124|SLC43A3	REV__ENSG00000134802|ENST00000395124|SLC43A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.729248046875	2	437.729458	873.444362	0.48198	0.00021098	0.13299	5.8214E-05	0.61497	0.00026919	437.7294765331459	26.126	0.69964	26.172	25.815	26.515	0.045509					43	19	4	0	0	0	0.91472	1	1082	1082		44.117	5.3107	1	121760	+		43743	19168	29247	29260	49593	49593					0.0025779938957839477
PTEEPCRH	8	Unmodified	_PTEEPCRH_					0	0	0			REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7186584472656	2	484.716359	967.418164	1.8339	0.00088894	1.6352	0.00079259	3.4691	0.0016815	484.717227769282	100.08	1.4855	100.42	100.11	101.59	0.3459					119	38	5	0	0	0	0.87922	1	12273	12273		31.955	2.8053	1	10268000	+		43744	21170	29248	29261	49594	49594					-0.06684793053545945
PTEGKSLTE	9	Unmodified	_PTEGKSLTE_					0	0	0			REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.24505615234375	2	481.245472	960.476391	0.38849	0.00018696	-0.36028	-0.00017338	0.028207	1.3575E-05	481.24516301016575	28.416	0.69288	28.452	28.16	28.853	0.03607					51	22	3	0	0	0	0.38563	2	1355	1347;1355		58.782	2.0609	1	267010	+		43745	21769	29249	29262	49595;49596	49596					-0.005428329272831434
PTEISQSL	8	Unmodified	_PTEISQSL_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.7290954589844	2	437.729458	873.444362	-0.35376	-0.00015485	0.99666	0.00043627	0.64289	0.00028141	437.7297635993945	26.354	0.82893	26.315	25.936	26.765	-0.038525					38	17	3	0	0	0	0.79403	1	1176	1176		63.306	9.9548	1	145470			43746	2075	29250	29263	49597	49597					0.0025779938957839477
PTELPFIE	8	Unmodified	_PTELPFIE_					0	0	0			REV__ENSG00000163655|ENST00000496455|GMPS	REV__ENSG00000163655|ENST00000496455|GMPS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.24871826171875	2	473.250026	944.485499	-0.51454	-0.00024351	-3.7055	-0.0017537	-4.2201	-0.0019972	473.24818540235697	28.981	1.8023	28.961	28.523	30.325	-0.019407					101	54	4	0	0	0	0.91005	1	1461	1461		42.474	5.3154	1	574970	+		43747	20954	29251	29264	49598	49598					0.01103560429044137
PTELRTPLPP	10	Unmodified	_PTELRTPLPP_					0	0	0		nc|ENSG00000168743|Q6UXI9-2|NPNT;nc|ENSG00000168743|Q6UXI9-5|NPNT;ENSG00000168743|ENST00000379987|NPNT;nc|ENSG00000168743|Q6UXI9-4|NPNT;nc|ENSG00000168743|Q6UXI9-6|NPNT;nc|ENSG00000168743|Q6UXI9-3|NPNT	nc|ENSG00000168743|Q6UXI9-2|NPNT	nc|ENSG00000168743|Q6UXI9-2|NPNT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.8203125	2	560.821681	1119.62881	0.38825	0.00021774	-3.7813	-0.0021206	-3.393	-0.0019029	560.8194818178797	92.394	2.729	92.618	91.343	94.072	0.22352					209	64	4	0	0	0	0.86348	1	9344	9344		31.53	2.3598	1	816880			43748	6430	29252	29265	49599	49599					0.07377987540144204
PTEPQGAEH	9	Unmodified	_PTEPQGAEH_					0	0	0		ENST00000519626.1_1_8:66754352-66754496:-|nuORF	ENST00000519626.1_1_8:66754352-66754496:-|nuORF	ENST00000519626.1_1_8:66754352-66754496:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.2183532714844	2	483.219788	964.425024	-0.8181	-0.00039532	-2.6918	-0.0013007	-3.5099	-0.001696	483.2184777480196	93.018	1.1303	93.468	92.947	94.077	0.44988					78	26	4	0	0	0	0.76255	1	11130	11130		35.618	1.4457	1	697510			43749	13139	29253	29266	49600	49600					-0.058611569013237386
PTESTVSTVLI	11	Unmodified	_PTESTVSTVLI_					0	0	0			REV__ENSG00000109758|ENST00000382774|HGFAC	REV__ENSG00000109758|ENST00000382774|HGFAC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.8148803710938	2	573.816261	1145.61797	-0.97824	-0.00056133	2.1463	0.0012316	1.1681	0.00067026	573.8173526774345	36.242	1.264	36.223	35.602	36.866	-0.018673					63	27	4	0	0	0	0.72918	1	2347	2347		26.693	1.1189	1	601960	+		43750	17772	29254	29267	49601	49601					0.050985403752065395
PTESVKEI	8	Unmodified	_PTESVKEI_					0	0	0		ENSG00000139324|ENST00000266712|TMTC3;nc|ENSG00000139324|Q6ZXV5|TMTC3	ENSG00000139324|ENST00000266712|TMTC3	ENSG00000139324|ENST00000266712|TMTC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7450866699219	2	451.745108	901.475663	0.00016611	7.5038E-08	0.28443	0.00012849	0.2846	0.00012857	451.7450667794695	33.328	0.79413	33.331	32.989	33.783	0.0030785					41	18	3	0	0	0	0.36381	2	1947	1936;1947		82.305	2.854	1	260270			43751	4362	29255	29268	49602;49603	49603					0.020983724236884882
PTFAFSRRG	9	Unmodified	_PTFAFSRRG_					0	0	0		ENST00000483688.2_1_1:207244099-207248655:+|nuORF	ENST00000483688.2_1_1:207244099-207248655:+|nuORF	ENST00000483688.2_1_1:207244099-207248655:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.3104858398438	2	519.777608	1037.54066	-0.46152	-0.00023989	-0.29605	-0.00015388	-0.75757	-0.00039377	519.7772254379421	47.558	0.70341	48.029	47.607	48.31	0.47139					34	17	3	0	0	0	0.20789	1	4553	4553		11.511	0	1	548460			43752	12520	29256	29269	49604	49604					0.023394117401949188
PTFLIVIFV	9	Unmodified	_PTFLIVIFV_					0	0	0		ENST00000498189.1_1_7:33573507-33573630:+|nuORF	ENST00000498189.1_1_7:33573507-33573630:+|nuORF	ENST00000498189.1_1_7:33573507-33573630:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8267211914062	2	524.825704	1047.63685	2.9134	0.001529	-0.74099	-0.00038889	2.1724	0.0011401	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.69914	1	10749	10749		40.573	7.057	1	30867000			43753	12823	29257	29270	49605	49605					0.1149416652756372
PTFLIVIFV	9	Unmodified	_PTFLIVIFV_					0	0	0		ENST00000498189.1_1_7:33573507-33573630:+|nuORF	ENST00000498189.1_1_7:33573507-33573630:+|nuORF	ENST00000498189.1_1_7:33573507-33573630:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8267822265625	2	524.825704	1047.63685	1.2413	0.00065145	0.91828	0.00048194	2.1595	0.0011334	524.8261082044575	99.092	3.5228	99.14	98.41	101.93	0.047852					344	82	7	0	0	0	0.77546	1	10630	10630		31.955	2.1133	1	29910000			43754	12823	29257	29270	49606	49606					0.1149416652756372
PTFMVGMTRGP	11	Unmodified	_PTFMVGMTRGP_					0	0	0			REV__ENST00000530219.1_1_11:8014470-8016722:+|nuORF	REV__ENST00000530219.1_1_11:8014470-8016722:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.818115234375	2	597.293919	1192.57328	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.79	1	116.88	116.38	117.38	0.090004								0	0	0	0.56276	1	12389	12389		23.523	1.5628	1		+		43755	22065	29258	29271	49607	49607					-0.015298852435080335
PTFVSTLIL	9	Unmodified	_PTFVSTLIL_					0	0	0			REV__ENST00000320954.10_2_3:33184083-33184542:+|nuORF	REV__ENST00000320954.10_2_3:33184083-33184542:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7970886230469	2	495.797143	989.579734	3.6416	0.0018055	-3.7269	-0.0018478	-0.085301	-4.2292E-05	495.7951678077777	105.11	0.93385	105.34	105.01	105.95	0.2268					55	22	3	0	0	0	0.19953	2	12853	12853;12872		73.975	7.5455	1	568440	+		43756	25006	29259	29272	49608;49609	49608					0.08452699251199647
PTGARMGLVVF	11	Unmodified	_PTGARMGLVVF_					0	0	0		ENST00000368984.7_1_10:124274195-124274315:+|nuORF	ENST00000368984.7_1_10:124274195-124274315:+|nuORF	ENST00000368984.7_1_10:124274195-124274315:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3187866210938	2	574.318251	1146.62195	0.59156	0.00033974	1.5937	0.00091529	2.1853	0.001255	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.6921	1	9553	9553		32.812	2.4947	1	1777600			43757	10608	29260	29273	49610	49610					0.05450351387912633
PTGCLWGPRA	10	Carbamidomethyl (C)	_PTGC(Carbamidomethyl (C))LWGPRA_	PTGC(1)LWGPRA		PTGC(51)LWGPRA		0	1	0		ENST00000361722.7_1_17:45788245-45788470:+|nuORF	ENST00000361722.7_1_17:45788245-45788470:+|nuORF	ENST00000361722.7_1_17:45788245-45788470:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.7811889648438	2	557.776751	1113.53895	-0.27608	-0.00015399	3.1238	0.0017424	2.8477	0.0015884	557.7781308934807	25.139	0.47025	25.19	24.898	25.368	0.050451					28	16	2	0	0	0	0.5766	1	982	982		51.335	12.529	1	46823			43758	10488	29261	29274	49611	49611	135				-0.013279653400786628
PTGCLWGPRA	10	Carbamidomethyl (C)	_PTGC(Carbamidomethyl (C))LWGPRA_					0	1	0		ENST00000361722.7_1_17:45788245-45788470:+|nuORF	ENST00000361722.7_1_17:45788245-45788470:+|nuORF	ENST00000361722.7_1_17:45788245-45788470:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	557.776751	1113.53895	0.17626	9.8316E-05	1.4978	0.00083542	1.674	0.00093374	557.7770610454509	24.998	0.5134	25.099	24.904	25.418	0.10045	-0.20148	-0.00055337	NaN	51.335	35	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85458			43759	10488	29261	29274			135				-0.013279653400786628
PTGCLWGPRA	10	Carbamidomethyl (C)	_PTGC(Carbamidomethyl (C))LWGPRA_					0	1	0		ENST00000361722.7_1_17:45788245-45788470:+|nuORF	ENST00000361722.7_1_17:45788245-45788470:+|nuORF	ENST00000361722.7_1_17:45788245-45788470:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	557.776751	1113.53895	0.80888	0.00045118	1.3722	0.00076539	2.1811	0.0012166	557.7765245366891	25.17	0.70598	25.194	24.876	25.582	0.024021	-0.10646	-0.00069344	NaN	51.335	48	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59362			43760	10488	29261	29274			135				-0.013279653400786628
PTGGSRTSATD	11	Unmodified	_PTGGSRTSATD_					0	0	0			REV__ENST00000606455.5_1_2:66670102-66794607:+|nuORF	REV__ENST00000606455.5_1_2:66670102-66794607:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.2484741210938	2	525.246535	1048.47852	0.85111	0.00044704	2.8949	0.0015206	3.746	0.0019676	525.2479309242038	26.545	0.78844	26.516	26.103	26.891	-0.029093					41	16	3	0	0	0	0.60058	1	1114	1114		44.377	0.75114	1	239470	+		43761	19863	29262	29275	49612	49612					-0.0437840418946962
PTGHRIPKQGT	11	Unmodified	_PTGHRIPKQGT_					0	0	0			REV__ENST00000369304.7_1_1:145524962-145527628:+|nuORF	REV__ENST00000369304.7_1_1:145524962-145527628:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3324584960938	2	596.333279	1190.652	-0.30561	-0.00018224	-0.32296	-0.00019259	-0.62857	-0.00037483	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.68532	1	9708	9708		33.922	4.7516	1	740920	+		43762	25619	29263	29276	49613	49613					0.0643042637743747
PTGKTSLAH	9	Unmodified	_PTGKTSLAH_					0	0	0		ENST00000550797.1_1_12:49458888-49462935:-|nuORF	ENST00000550797.1_1_12:49458888-49462935:-|nuORF	ENST00000550797.1_1_12:49458888-49462935:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.30267333984375	2	456.250892	910.48723	-2.5651	-0.0011703	1.3267	0.00060531	-1.2384	-0.00056504	456.2513950343449	41.923	0.58042	42.337	42.085	42.666	0.4139					18	14	2	0	0	0	0.20789	1	3693	3693		35.618	19.145	1	226690			43763	13661	29264	29277	49614	49614					0.028406142376525167
PTGNRLSK	8	Unmodified	_PTGNRLSK_					0	0	0		ENSG00000117480|ENST00000243167|FAAH	ENSG00000117480|ENST00000243167|FAAH	ENSG00000117480|ENST00000243167|FAAH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.86883544921875	2	436.751059	871.487565	0.37203	0.00016249	-0.46918	-0.00020491	-0.097142	-4.2427E-05	436.75098675509315	18.392	0.37248	17.915	17.657	18.03	-0.47694					10	7	2	0	0	0	0.4196	1	380	380		12.207	6.2856	1	11487			43764	2982	29265	29278	49615	49615					0.04668033957523221
PTGVARVSSRR	11	Unmodified	_PTGVARVSSRR_					0	0	0			REV__ENST00000282096.8_1_11:14665391-14665622:+|nuORF	REV__ENST00000282096.8_1_11:14665391-14665622:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	593.3445434570312	2	593.344178	1184.6738	-0.61427	-0.00036447	1.0434	0.0006191	0.42913	0.00025462	593.3447041008176	103.62	2.4136	103.61	103.22	105.64	-0.0035706					155	57	4	0	0	0	0.67778	1	11226	11226		35.152	3.6222	1	2207400	+		43765	24610	29266	29279	49616	49616					0.08885231126009785
PTHLFVGVPLK	11	Unmodified	_PTHLFVGVPLK_					0	0	0			REV__L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|1|1|sense	REV__L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.36328125	2	604.363516	1206.71248	3.6458	0.0022034	1.558	0.00094162	5.2038	0.003145	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.75121	1	13056	13056		24.519	2.8334	1	5883900	+		43766	29602	29267	29280	49617	49617					0.11739143707836774
PTHRSYLGPG	10	Unmodified	_PTHRSYLGPG_					0	0	0		ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	542.779541015625	2	542.780348	1083.54614	-0.23421	-0.00012713	-0.93681	-0.00050848	-1.171	-0.00063561	542.779695824281	34.398	0.83688	34.401	34.057	34.894	0.0026054					54	19	4	0	0	0	0.6116	1	2112	2112		49.442	2.9848	1	451720			43767	8134	29268	29281	49618	49618					0.0077109053199819755
PTIFYWIGAG	10	Unmodified	_PTIFYWIGAG_					0	0	0			REV__ENSG00000165970|ENST00000525748|SLC6A5	REV__ENSG00000165970|ENST00000525748|SLC6A5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	562.7908325195312	2	562.792392	1123.57023	-1.163	-0.00065455	-2.4045	-0.0013532	-3.5675	-0.0020078	562.7911139498766	49.976	0.60409	49.976	49.616	50.22	0					23	13	2	0	0	0	0.81018	1	3973	3973		38.806	0.99462	1	104650	+		43768	21237	29269	29282	49619	49619					0.013389309656531623
PTIIALVVLL	10	Unmodified	_PTIIALVVLL_					0	0	0		nc|ENSG00000168032|O75355-2|ENTPD3;ENSG00000168032|ENST00000301825|ENTPD3	nc|ENSG00000168032|O75355-2|ENTPD3	nc|ENSG00000168032|O75355-2|ENTPD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.356689453125	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.88541	1	1964	1964		11.511	0	1	1497200			43769	6359	29270	29283	49620	49620					0.18194411107424457
PTIITGLVV	9	Unmodified	_PTIITGLVV_					0	0	0			REV__ENST00000506793.5_1_4:44680541-44700695:+|nuORF	REV__ENST00000506793.5_1_4:44680541-44700695:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7920837402344	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.7932	1	1939	1939		24.203	3.7209	1	3484100	+		43770	20271	29271	29284	49621	49621					0.10984716596760791
PTIKIFQKG	9	Unmodified	_PTIKIFQKG_					0	0	0		nc|ENSG00000143870|Q15084-3|PDIA6;ENSG00000143870|ENST00000272227|PDIA6;nc|ENSG00000143870|Q15084-4|PDIA6;nc|ENSG00000143870|Q15084-5|PDIA6;nc|ENSG00000143870|Q15084-2|PDIA6	nc|ENSG00000143870|Q15084-3|PDIA6	nc|ENSG00000143870|Q15084-3|PDIA6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3134765625	2	516.316035	1030.61752	0.86855	0.00044845	-4.433	-0.0022888	-3.5644	-0.0018404	516.3137238163814	117	0.68697	117.02	116.46	117.15	0.026466					34	24	2	0	0	0	0.20789	1	12861	12861		34.173	13.226	1	63975			43771	4671	29272	29285	49622	49622					0.10343210236646883
PTIPLPRVGPF	11	Unmodified	_PTIPLPRVGPF_					0	0	0			REV__nc|ENSG00000053254|O00409|FOXN3	REV__nc|ENSG00000053254|O00409|FOXN3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.356689453125	2	597.355691	1192.69683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.978	1	95.397	94.897	95.897	0.41964								0	0	0	0.56276	1	11391	11391		24.519	0	1		+		43772	16388	29273	29286	49623	49623					0.10818857190770359
PTIPVATTISV	11	Unmodified	_PTIPVATTISV_					0	0	0		nc|ENSG00000169876|Q685J3-2|MUC17;ENSG00000169876|ENST00000306151|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.6467895507812	2	549.823889	1097.63323	0.21737	0.00011952	1.9661	0.001081	2.1835	0.0012005	549.8244994613499	30.483	0.097958	30.595	30.518	30.616	0.11225					5	3	2	0	0	0	0.17385	1	1354	1354		13.454	0	1	38701			43773	6534	29274	29287	49624	49624					0.08831451963033032
PTIRAMAMA	9	Unmodified	_PTIRAMAMA_					0	0	0			REV__ENST00000595465.6_1_19:15512376-15521402:-|nuORF	REV__ENST00000595465.6_1_19:15512376-15521402:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.251953125	2	481.251523	960.488493	-0.050822	-2.4458E-05	-0.7749	-0.00037292	-0.82572	-0.00039738	481.2509410955237	29.372	0.64521	29.282	28.974	29.619	-0.089546					29	14	3	0	0	0	0.78058	1	1858	1858		30.504	2.4222	1	228450	+		43774	26165	29275	29288	49625	49625					0.0066678901055183815
PTIRKTLRLWM	11	Unmodified	_PTIRKTLRLWM_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2892761230469	3	472.28323	1413.82786	-0.8986	-0.00042439	-1.1025	-0.00052069	-2.0011	-0.00094508	472.2816097812858	100.72	0.95904	100.72	100.24	101.2	0					37	21	2	0	0	0	0.17911	1	10160	10160		13.508	0	1	51234			43775	4393	29276	29289	49626	49626					0.13749924567196103
PTIRLRSD	8	Unmodified	_PTIRLRSD_					0	0	0			REV__ENST00000470609.5_1_17:48585906-48599496:+|nuORF	REV__ENST00000470609.5_1_17:48585906-48599496:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2776184082031	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.87064	1	8255	8255		29.15	0	1	1929800	+		43776	19310	29277	29290	49627	49627					0.060319920203255606
PTIRLRSD	8	Unmodified	_PTIRLRSD_					0	0	0			REV__ENST00000470609.5_1_17:48585906-48599496:+|nuORF	REV__ENST00000470609.5_1_17:48585906-48599496:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2783508300781	2	479.277441	956.540328	-0.81003	-0.00038823	1.7076	0.00081842	0.89757	0.00043018	479.2781277040713	97.238	1.2623	97.469	96.955	98.217	0.23103					74	29	3	0	0	0	0.87064	1	10033	10033		29.15	0	1	700460	+		43777	19310	29277	29290	49628	49628					0.060319920203255606
PTITLLLE	8	Unmodified	_PTITLLLE_					0	0	0		nc|ENSG00000170959|M0R2J8|DCDC1;chr11:30915711-30916870|14|14.5|0.66|4.46|-|ENST00000597505|DCDC1,DCDC1;chr11:30911420-30915511|13|14.38|0.7|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30909116-30911327|13|15.38|0.76|4.34|-|ENST00000597505|DCDC1,DCDC1;chr11:30905164-30906540|21|14.05|0.72|4.28|-|ENST00000597505|DCDC1,DCDC1;chr11:30903683-30904961|18|18.22|0.57|5.0|-|ENST00000597505|DCDC1,DCDC1;chr11:30899642-30900346|23|15.83|0.82|4.27|-|ENST00000597505|DCDC1,DCDC1;chr11:30894384-30899541|18|19.5|0.94|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30892997-30894248|22|18.0|0.9|4.32|-|ENST00000597505|DCDC1,DCDC1;ENSG00000170959|ENST00000684477|DCDC1;nc|ENSG00000170959|M0R2J8-2|DCDC1;nc|ENSG00000170959|M0R2J8-3|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.274169921875	2	450.276044	898.537535	0.70497	0.00031743	-3.5264	-0.0015878	-2.8214	-0.0012704	450.274392035395	95.119	1.9705	95.282	94.908	96.878	0.16307					118	46	3	0	0	0	0.87922	1	9809	9809		31.955	7.7521	1	967700			43778	100	29278	29291	49629	49629					0.08420723842800726
PTITLLLE	8	Unmodified	_PTITLLLE_					0	0	0		nc|ENSG00000170959|M0R2J8|DCDC1;chr11:30915711-30916870|14|14.5|0.66|4.46|-|ENST00000597505|DCDC1,DCDC1;chr11:30911420-30915511|13|14.38|0.7|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30909116-30911327|13|15.38|0.76|4.34|-|ENST00000597505|DCDC1,DCDC1;chr11:30905164-30906540|21|14.05|0.72|4.28|-|ENST00000597505|DCDC1,DCDC1;chr11:30903683-30904961|18|18.22|0.57|5.0|-|ENST00000597505|DCDC1,DCDC1;chr11:30899642-30900346|23|15.83|0.82|4.27|-|ENST00000597505|DCDC1,DCDC1;chr11:30894384-30899541|18|19.5|0.94|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30892997-30894248|22|18.0|0.9|4.32|-|ENST00000597505|DCDC1,DCDC1;ENSG00000170959|ENST00000684477|DCDC1;nc|ENSG00000170959|M0R2J8-2|DCDC1;nc|ENSG00000170959|M0R2J8-3|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.27410888671875	2	450.276044	898.537535	-1.7763	-0.00079984	-1.8855	-0.00084901	-3.6619	-0.0016489	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.85277	1	9514	9514		25.45	2.4077	1	35178000			43779	100	29278	29291	49630	49630					0.08420723842800726
PTKAARQK	8	Unmodified	_PTKAARQK_					0	0	0		ENSG00000183921|ENST00000602312|SDR42E2	ENSG00000183921|ENST00000602312|SDR42E2	ENSG00000183921|ENST00000602312|SDR42E2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2744445800781	2	450.274701	898.534849	-1.7763	-0.00079984	1.0964	0.00049366	-0.67999	-0.00030618	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.87479	1	9441	9441		30.504	0	1	35178000			43780	7575	29279	29292	49631	49631					0.08152313228515595
PTKAGRKEA	9	Unmodified	_PTKAGRKEA_					0	0	0			REV__nc|ENSG00000129116|Q8WX93|PALLD	REV__nc|ENSG00000129116|Q8WX93|PALLD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27734375	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.68711	1	8604	8604		41.427	4.9799	1	7040000	+		43781	29835	29280	29293	49632	49632					0.06031992020314192
PTKASLYGAIL	11	Unmodified	_PTKASLYGAIL_					0	0	0		ENSG00000072954|ENST00000187762|TMEM38A	ENSG00000072954|ENST00000187762|TMEM38A	ENSG00000072954|ENST00000187762|TMEM38A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3302001953125	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.69995	1	9048	9048		31.53	1.2121	1	11042000			43782	1285	29281	29294	49633	49633					0.0881915819995811
PTKFIKNPG	9	Unmodified	_PTKFIKNPG_					0	0	0		ENSG00000128645|ENST00000331462|HOXD1	ENSG00000128645|ENST00000331462|HOXD1	ENSG00000128645|ENST00000331462|HOXD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2900390625	2	501.292559	1000.57057	-0.50774	-0.00025453	-3.8573	-0.0019337	-4.3651	-0.0021882	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.48102	2	8274	8251;8274		52.937	5.2794	1	3014100			43783	3557	29282	29295	49634;49635	49635					0.07030350685511166
PTKFIKNPG	9	Unmodified	_PTKFIKNPG_					0	0	0		ENSG00000128645|ENST00000331462|HOXD1	ENSG00000128645|ENST00000331462|HOXD1	ENSG00000128645|ENST00000331462|HOXD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2901611328125	2	501.292559	1000.57057	-1.5697	-0.00078686	-2.6476	-0.0013272	-4.2173	-0.0021141	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.69624	1	8872	8872		40.778	8.8233	1	9242300			43784	3557	29282	29295	49636	49636					0.07030350685511166
PTKFIKNPG	9	Unmodified	_PTKFIKNPG_					0	0	0		ENSG00000128645|ENST00000331462|HOXD1	ENSG00000128645|ENST00000331462|HOXD1	ENSG00000128645|ENST00000331462|HOXD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2906799316406	2	501.292559	1000.57057	-0.86867	-0.00043546	-3.0512	-0.0015296	-3.9199	-0.001965	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.76419	1	9803	9803		35.152	0.97948	1	2445400			43785	3557	29282	29295	49637	49637					0.07030350685511166
PTKFVIAV	8	Unmodified	_PTKFVIAV_					0	0	0			REV__ENSG00000162924|ENST00000394479|REL	REV__ENSG00000162924|ENST00000394479|REL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77178955078125	2	437.773471	873.53239	-0.032548	-1.4248E-05	-3.9212	-0.0017166	-3.9537	-0.0017308	437.77161269438426	38.189	0.59097	38.711	38.32	38.911	0.52235					36	14	3	0	0	0	0.8347	1	3153	3153		23.042	1.0826	1	1204300	+		43786	20863	29283	29296	49638	49638					0.09056464770844741
PTKGKEKR	8	Unmodified	_PTKGKEKR_					0	0	0			REV__nc|ENSG00000066455|Q8TBA6-2|GOLGA5	REV__nc|ENSG00000066455|Q8TBA6-2|GOLGA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2874755859375	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.87792	1	9863	9863		31.53	4.7337	1	40161000	+		43787	16524	29284	29297	49639	49639					0.0874858239999412
PTKGLRQTT	9	Unmodified	_PTKGLRQTT_					0	0	0		ENSG00000162062|ENST00000361837|TEDC2;ENST00000562253.1_1_16:2510284-2511226:+|nuORF	ENSG00000162062|ENST00000361837|TEDC2	ENSG00000162062|ENST00000361837|TEDC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.290283203125	2	501.290548	1000.56654	-0.97974	-0.00049113	0.89004	0.00044617	-0.089695	-4.4963E-05	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.75725	1	7961	7961		36.447	0.82846	1	2111000			43788	5665	29285	29298	49640	49640					0.06628261191792717
PTKGLRQTT	9	Unmodified	_PTKGLRQTT_					0	0	0		ENSG00000162062|ENST00000361837|TEDC2;ENST00000562253.1_1_16:2510284-2511226:+|nuORF	ENSG00000162062|ENST00000361837|TEDC2	ENSG00000162062|ENST00000361837|TEDC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2906188964844	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.77696	1	9379	9379		31.53	0	1	9883700			43789	5665	29285	29298	49641	49641					0.06628261191792717
PTKGLRQTT	9	Unmodified	_PTKGLRQTT_					0	0	0		ENSG00000162062|ENST00000361837|TEDC2;ENST00000562253.1_1_16:2510284-2511226:+|nuORF	ENSG00000162062|ENST00000361837|TEDC2	ENSG00000162062|ENST00000361837|TEDC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2903137207031	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.76764	1	10171	10171		34.173	0	1	9038000			43790	5665	29285	29298	49642	49642					0.06628261191792717
PTKHLRTPSTK	11	Unmodified	_PTKHLRTPSTK_					0	0	0		nc|ENSG00000128487|Q5M775-5|SPECC1;nc|ENSG00000128487|Q5M775-3|SPECC1;nc|ENSG00000128487|Q5M775-2|SPECC1;nc|ENSG00000128487|Q5M775-4|SPECC1;ENSG00000128487|ENST00000395527|SPECC1	nc|ENSG00000128487|Q5M775-5|SPECC1	nc|ENSG00000128487|Q5M775-5|SPECC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.36962890625	2	633.369861	1264.72517	0.88638	0.00056141	-2.1201	-0.0013428	-1.2337	-0.0007814	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.48313	1	9783	9783		53.089	11.662	1	5166300			43791	3542	29286	29299	49643	49643					0.1033955510006308
PTKKKAMFLAS	11	Unmodified	_PTKKKAMFLAS_					0	0	0			REV__ENSG00000125651|ENST00000394456|GTF2F1	REV__ENSG00000125651|ENST00000394456|GTF2F1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.858154296875	2	611.354834	1220.69511	-0.40504	-0.00024762	3.0705	0.0018771	2.6654	0.0016295	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.66009	1	10278	10278		37.508	5.9784	1	12417000	+		43792	18655	29287	29300	49644	49644					0.09359480110538243
PTKKKAMFLAS	11	Unmodified	_PTKKKAMFLAS_					0	0	0			REV__ENSG00000125651|ENST00000394456|GTF2F1	REV__ENSG00000125651|ENST00000394456|GTF2F1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3565063476562	2	611.354834	1220.69511	0.21646	0.00013233	2.3298	0.0014243	2.5463	0.0015567	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.69248	1	10252	10252		32.751	6.0576	1	12399000	+		43793	18655	29287	29300	49645	49645					0.09359480110538243
PTKKKGKHER	10	Unmodified	_PTKKKGKHER_					0	0	0			REV__ENSG00000105270|ENST00000360535|CLIP3	REV__ENSG00000105270|ENST00000360535|CLIP3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8681640625	2	604.864746	1207.71494	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.58	1	114.56	114.06	115.06	-0.024452								0	0	0	0.45132	1	12698	12698		19.104	2.6304	1		+		43794	17522	29288	29301	49646	49646					0.11938992165482887
PTKLFDVLSGT	11	Unmodified	_PTKLFDVLSGT_					0	0	0			REV__nc|ENSG00000182866|P06239-3|LCK	REV__nc|ENSG00000182866|P06239-3|LCK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3425903320312	2	589.326796	1176.63904	-0.67119	-0.00039555	-2.9176	-0.0017194	-3.5888	-0.002115	589.8250619867812	93.568	0.21117	93.638	93.54	93.751	0.069603					8	4	3	0	0	0	0.17415	1	9725	9725		27.047	0	1	46558	+		43795	30081	29289	29302	49647	49647					0.0577855047470166
PTKLGRTNA	9	Unmodified	_PTKLGRTNA_					0	0	0		ENST00000520083.1_1_9:36923038-36923170:-|nuORF	ENST00000520083.1_1_9:36923038-36923170:-|nuORF	ENST00000520083.1_1_9:36923038-36923170:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2776184082031	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.78124	1	7819	7819		30.318	2.4355	1	1311100			43796	13154	29290	29303	49648	49648					0.06031992020314192
PTKLPVLPKQM	11	Unmodified	_PTKLPVLPKQM_					0	0	0			REV__ENST00000471771.5_1_13:28014269-28014434:-|nuORF	REV__ENST00000471771.5_1_13:28014269-28014434:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.379638671875	2	626.378309	1250.74206	1.374	0.00086065	-0.26629	-0.0001668	1.1077	0.00069385	626.3778876948486	107.84	0.75342	107.98	107.32	108.07	0.13867					64	18	4	0	0	0	0.61369	1	11583	11583		42.864	11.334	1	27248000	+		43797	27238	29291	29304	49649	49649					0.12672339661639853
PTKLRGSGK	9	Unmodified	_PTKLRGSGK_					0	0	0		ENST00000376088.7_2_X:49688348-49689877:+|nuORF	ENST00000376088.7_2_X:49688348-49689877:+|nuORF	ENST00000376088.7_2_X:49688348-49689877:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28778076171875	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.76764	1	10005	10005		34.173	5.023	1	40161000			43798	10814	29292	29305	49650	49650					0.08748582400005489
PTKLYKLMLR	10	Unmodified	_PTKLYKLMLR_					0	0	0		nc|ENSG00000256061|Q8WXU2-3|DNAAF4	nc|ENSG00000256061|Q8WXU2-3|DNAAF4	nc|ENSG00000256061|Q8WXU2-3|DNAAF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.59429931640625	3	421.593293	1261.75805	0.912	0.00038449	2.337	0.00098528	3.249	0.0013698	421.59418663628617	15.491	0.32785	15.569	15.44	15.768	0.077959					27	14	2	0	0	0	0.85441	1	37	37		20.837	4.8304	1	26587			43799	15297	29293	29306	49651	49651					0.13764045898574295
PTKNHLLLL	9	Unmodified	_PTKNHLLLL_					0	0	0			REV__ENSG00000104804|ENST00000221399|TULP2	REV__ENSG00000104804|ENST00000221399|TULP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8268432617188	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.67345	3	10055	10055;10115;10146		42.396	8.8806	1	15330000	+		43800	17472	29294	29307	49652;49653;49654	49652					0.12214899128002799
PTKNHLLLL	9	Unmodified	_PTKNHLLLL_					0	0	0			REV__ENSG00000104804|ENST00000221399|TULP2	REV__ENSG00000104804|ENST00000221399|TULP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8272705078125	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.74721	1	10362	10362		37.159	8.0096	1	23918000	+		43801	17472	29294	29307	49655	49655					0.12214899128002799
PTKNPTLFIDA	11	Unmodified	_PTKNPTLFIDA_					0	0	0			REV__ENSG00000156858|ENST00000300835|PRR14	REV__ENSG00000156858|ENST00000300835|PRR14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.8372192382812	2	608.832246	1215.64994	5.7403	0.0034949	2.8553	0.0017384	8.5956	0.0052333	608.8338988848703	110.04	0.64108	110.11	109.94	110.58	0.067993					56	22	4	0	0	0	0.7144	1	13365	13365		29.17	4.6509	1	3727200	+		43802	20509	29295	29308	49656	49656					0.05073952848988483
PTKNVKTTTN	10	Unmodified	_PTKNVKTTTN_					0	0	0		ENSG00000156920|ENST00000394143|ADGRG4;nc|ENSG00000156920|Q8IZF6-2|ADGRG4;nc|ENSG00000156920|Q8IZF6-3|ADGRG4	ENSG00000156920|ENST00000394143|ADGRG4	ENSG00000156920|ENST00000394143|ADGRG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.30615234375	2	552.306395	1102.59824	2.2801	0.0012593	-2.1564	-0.001191	0.1237	6.8322E-05	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.86471	1	9920	9920		30.318	0	1	1797400			43803	5401	29296	29309	49657	49657					0.05104209155092576
PTKPAMPPP	9	Unmodified	_PTKPAMPPP_					0	0	0			REV__ENSG00000166317|ENST00000394810|SYNPO2L	REV__ENSG00000166317|ENST00000394810|SYNPO2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.254638671875	2	468.254588	934.494624	0.60478	0.00028319	-0.093062	-4.3577E-05	0.51172	0.00023962	468.25441943244317	81.627	3.5592	81.77	80.781	84.34	0.14352					144	82	2	0	0	0	0.78058	1	7928	7928		30.504	2.2494	1	205460	+		43804	21279	29297	29310	49658	49658					0.024756305137316303
PTKPSKSGR	9	Unmodified	_PTKPSKSGR_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2772521972656	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.7932	1	8384	8384		24.519	2.5593	1	2070000	+		43805	23285	29298	29311	49659	49659					0.060319920203255606
PTKQPEMH	8	Unmodified	_PTKQPEMH_					0	0	0			REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|114|2|sense	REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|114|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.2360534667969	2	484.236927	966.459301	-1.5617	-0.00075625	-0.159	-7.6996E-05	-1.7207	-0.00083324	484.2368161920654	85.001	0.56653	85.15	84.753	85.32	0.14952					43	12	4	0	0	0	0.91977	1	8226	8226		45.952	0	1	1708900	+		43806	29503	29299	29312	49660	49660					-0.025270320140862168
PTKQPRTPRP	10	Unmodified	_PTKQPRTPRP_					0	0	0		ENSG00000121871|ENST00000475390|SLITRK3;chr3:165190851-165196592|21|16.81|0.87|4.27|-|ENST00000241274|SLITRK3,SLITRK3	ENSG00000121871|ENST00000475390|SLITRK3	ENSG00000121871|ENST00000475390|SLITRK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3429565429688	2	589.343646	1176.67274	0.83312	0.00049099	-2.1148	-0.0012464	-1.2817	-0.00075536	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.86802	1	9849	9849		27.047	0.25122	1	20363000			43807	394	29300	29313	49661	49661					0.09147016757128767
PTKQPRTPRP	10	Unmodified	_PTKQPRTPRP_					0	0	0		ENSG00000121871|ENST00000475390|SLITRK3;chr3:165190851-165196592|21|16.81|0.87|4.27|-|ENST00000241274|SLITRK3,SLITRK3	ENSG00000121871|ENST00000475390|SLITRK3	ENSG00000121871|ENST00000475390|SLITRK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3424682617188	2	589.343646	1176.67274	-1.324	-0.00078029	-0.19058	-0.00011232	-1.5146	-0.00089261	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.86587	1	9160	9160		29.17	1.2878	1	5946500			43808	394	29300	29313	49662	49662					0.09147016757128767
PTKQPRTPRP	10	Unmodified	_PTKQPRTPRP_					0	0	0		ENSG00000121871|ENST00000475390|SLITRK3;chr3:165190851-165196592|21|16.81|0.87|4.27|-|ENST00000241274|SLITRK3,SLITRK3	ENSG00000121871|ENST00000475390|SLITRK3	ENSG00000121871|ENST00000475390|SLITRK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3432006835938	2	589.343646	1176.67274	0.71715	0.00042265	-1.4797	-0.00087205	-0.76255	-0.0004494	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.86106	1	10920	10920		33.922	9.4024	1	2439600			43809	394	29300	29313	49663	49663					0.09147016757128767
PTKRLGVT	8	Unmodified	_PTKRLGVT_					0	0	0		ENSG00000163932|ENST00000330452|PRKCD;nc|ENSG00000163932|Q05655-2|PRKCD	ENSG00000163932|ENST00000330452|PRKCD	ENSG00000163932|ENST00000330452|PRKCD	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2558898925781	2	436.271627	870.528701	-0.16282	-7.1033E-05	-2.005	-0.00087471	-2.1678	-0.00094575	436.2693400629188	98.989	0.62222	99.039	98.483	99.105	0.04982					16	13	2	0	0	0	0.4196	1	10453	10453		21.96	0	1	23377			43810	5885	29301	29314	49664	49664					0.0882579499698295
PTKRVKFFP	9	Unmodified	_PTKRVKFFP_					0	0	0			REV__ENST00000461417.5_1_2:220110721-220111658:+|nuORF	REV__ENST00000461417.5_1_2:220110721-220111658:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3408813476562	2	560.337301	1118.66005	3.1377	0.0017581	1.8932	0.0010608	5.0309	0.002819	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.76764	1	11379	11379		34.173	3.6689	1	83033000	+		43811	27028	29302	29315	49665	49665					0.10546605364879724
PTKRVRTGP	9	Unmodified	_PTKRVRTGP_					0	0	0			REV__ENSG00000077097|ENST00000264331|TOP2B	REV__ENSG00000077097|ENST00000264331|TOP2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.30621337890625	2	506.306532	1010.59851	-1.5944	-0.00080728	0.041234	2.0877E-05	-1.5532	-0.0007864	506.3064134507071	110.01	0.48894	110.02	109.8	110.29	0.0060425					27	17	2	0	0	0	0.77244	1	11706	11706		32.812	2.3088	1	297280	+		43812	16735	29303	29316	49666	49666					0.0936367366560944
PTKRVRTGP	9	Unmodified	_PTKRVRTGP_					0	0	0			REV__ENSG00000077097|ENST00000264331|TOP2B	REV__ENSG00000077097|ENST00000264331|TOP2B	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	506.306532	1010.59851	-0.6844	-0.00034652	-0.44127	-0.00022342	-1.1257	-0.00056994	506.30600079969884	109.86	0.36902	109.86	109.69	110.06	0	-0.14343	0.0023881	NaN	32.812	30	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	213950	+		43813	16735	29303	29316							0.0936367366560944
PTKRVRTGP	9	Unmodified	_PTKRVRTGP_					0	0	0			REV__ENSG00000077097|ENST00000264331|TOP2B	REV__ENSG00000077097|ENST00000264331|TOP2B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	506.306532	1010.59851	0.8087	0.00040945	0.097965	4.96E-05	0.90667	0.00045905	506.3071643306265	110.06	0.30804	110.13	110.08	110.39	0.073685	0.12891	0.0029342	NaN	32.812	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	203950	+		43814	16735	29303	29316							0.0936367366560944
PTKRVRTGP	9	Unmodified	_PTKRVRTGP_					0	0	0			REV__ENSG00000077097|ENST00000264331|TOP2B	REV__ENSG00000077097|ENST00000264331|TOP2B	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	506.306532	1010.59851	-1.5944	-0.00080728	0.041234	2.0877E-05	-1.5532	-0.0007864	506.3064134507071	110.01	0.48894	110.02	109.8	110.29	0.0060425	0.013933	0.0028767	NaN	32.812	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	297280	+		43815	16735	29303	29316							0.0936367366560944
PTKRVRTGP	9	Unmodified	_PTKRVRTGP_					0	0	0			REV__ENSG00000077097|ENST00000264331|TOP2B	REV__ENSG00000077097|ENST00000264331|TOP2B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	506.306532	1010.59851	1.966	0.0009954	-2.864	-0.0014501	-0.898	-0.00045467	506.80665120578976	109.89	0.25826	109.96	109.82	110.08	0.067932	-0.046285	-6.5167E-05	NaN	32.812	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	187400	+		43816	16735	29303	29316							0.0936367366560944
PTKRVRTGP	9	Unmodified	_PTKRVRTGP_					0	0	0			REV__ENSG00000077097|ENST00000264331|TOP2B	REV__ENSG00000077097|ENST00000264331|TOP2B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	506.306532	1010.59851	6.3231	0.0032014	-7.8972	-0.0039984	-1.5741	-0.00079697	506.3024213905849	109.98	0.53503	110.05	109.92	110.45	0.068001	0.046871	-0.0051618	NaN	32.812	24	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	294350	+		43817	16735	29303	29316							0.0936367366560944
PTKSALSAVAS	11	Unmodified	_PTKSALSAVAS_					0	0	0		ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	ENSG00000198604|ENST00000360310|BAZ1A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.314208984375	2	516.290214	1030.56587	-0.047259	-2.4399E-05	-0.31917	-0.00016479	-0.36643	-0.00018919	516.290345938216	99.526	0.20191	99.567	99.427	99.629	0.041107					9	4	3	0	0	0	0.17415	1	10557	10557		41.427	3.6151	1	281390			43818	8294	29304	29317	49667	49667					0.05181421752058668
PTKSLLKVY	9	Unmodified	_PTKSLLKVY_					0	0	0			REV__ENST00000503126.1_1_5:179133324-179137021:+|nuORF	REV__ENST00000503126.1_1_5:179133324-179137021:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.826904296875	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.76764	1	10701	10701		34.173	0	1	30867000	+		43819	18719	29305	29318	49668	49668					0.11092077033868009
PTKSVLAL	8	Unmodified	_PTKSVLAL_					0	0	0		ENST00000342784.6_1_19:15225167-15225317:+|nuORF	ENST00000342784.6_1_19:15225167-15225317:+|nuORF	ENST00000342784.6_1_19:15225167-15225317:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	414.76177978515625	2	414.763104	827.511654	-1.8105	-0.00075094	-1.5324	-0.00063559	-3.343	-0.0013865	414.7624144330171	88.215	3.3838	88.416	87.026	90.41	0.20114					235	79	5	0	0	0	0.89962	1	8802	8802		38.806	0	1	11466000			43820	10267	29306	29319	49669	49669					0.09099874391165486
PTKTRART	8	Unmodified	_PTKTRART_					0	0	0		ENST00000452284.1_1_22:21356738-21362956:+|nuORF;ENST00000436079.1_1_22:21356738-21363657:+|nuORF;ENST00000429962.1_1_22:21356738-21357321:+|nuORF	ENST00000452284.1_1_22:21356738-21362956:+|nuORF	ENST00000452284.1_1_22:21356738-21362956:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77764892578125	2	465.777608	929.540663	-1.5315	-0.00071332	1.4551	0.00067775	-0.076382	-3.5577E-05	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.87479	1	7919	7919		30.504	5.9996	1	991370			43821	11619	29307	29320	49670	49670					0.07307411740168845
PTKVPIVP	8	Unmodified	_PTKVPIVP_					0	0	0			REV__ENST00000520771.1_1_8:125565235-125568613:-|nuORF	REV__ENST00000520771.1_1_8:125565235-125568613:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2949523925781	2	425.773471	849.53239	1.8393	0.00078313	1.0623	0.00045232	2.9016	0.0012354	425.7740856852374	74.969	0.72659	75.014	74.592	75.318	0.04509					29	21	2	0	0	0	0.4196	1	7245	7245		18.324	0	1	35384	+		43822	21692	29308	29321	49671	49671					0.10160464770842736
PTKVPIVP	8	Unmodified	_PTKVPIVP_					0	0	0			REV__ENST00000520771.1_1_8:125565235-125568613:-|nuORF	REV__ENST00000520771.1_1_8:125565235-125568613:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.294921875	2	425.773471	849.53239	-1.3924	-0.00059284	1.1747	0.00050014	-0.21772	-9.2701E-05	425.7753997920374	74.697	1.4346	74.783	74.372	75.807	0.085907					53	41	2	0	0	0	0.4196	1	6873	6873		25.45	0	1	74373	+		43823	21692	29308	29321	49672	49672					0.10160464770842736
PTKWLKRF	8	Unmodified	_PTKWLKRF_					0	0	0			REV__nc|ENSG00000176915|Q86XL3-2|ANKLE2	REV__nc|ENSG00000176915|Q86XL3-2|ANKLE2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3267822265625	2	538.324194	1074.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.04	1	114.07	113.57	114.57	0.026466								0	0	0	0.29871	1	12477	12477		23.042	4.7181	1		+		43824	22156	29309	29322	49673	49673					0.09950336193401199
PTLAFVEDV	9	Unmodified	_PTLAFVEDV_					0	0	0			REV__nc|ENSG00000116604|Q14814-5|MEF2D	REV__nc|ENSG00000116604|Q14814-5|MEF2D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.25921630859375	2	495.760758	989.506963	-1.9425	-0.00096301	0.087961	4.3608E-05	-1.8545	-0.0009194	495.7602537576442	19.302	1.1114	19.302	18.834	19.945	0					76	43	2	0	0	0	0.7932	1	429	429		23.042	0	1	56551	+		43825	29795	29310	29323	49674	49674					0.011789454577638026
PTLISILPLL	10	Unmodified	_PTLISILPLL_					0	0	0		ENST00000304733.7_1_16:90072024-90072498:-|nuORF	ENST00000304733.7_1_16:90072024-90072498:-|nuORF	ENST00000304733.7_1_16:90072024-90072498:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.3594360351562	2	540.357368	1078.70018	-0.068166	-3.6834E-05	2.3888	0.0012908	2.3206	0.001254	540.3584971364328	36.917	1.6881	36.864	36.337	38.025	-0.053558					103	37	4	0	0	0	0.85958	1	2465	2465		15.642	0	1	646150			43826	9841	29311	29324	49675	49675					0.16398107244822313
PTLISILPLL	10	Unmodified	_PTLISILPLL_					0	0	0		ENST00000304733.7_1_16:90072024-90072498:-|nuORF	ENST00000304733.7_1_16:90072024-90072498:-|nuORF	ENST00000304733.7_1_16:90072024-90072498:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3595581054688	2	540.357368	1078.70018	-0.87065	-0.00047046	3.4074	0.0018412	2.5367	0.0013707	540.3590107608643	36.885	1.6	36.896	36.391	37.991	0.011173					96	35	4	0	0	0	0.86589	1	2470	2470		29.15	11.785	1	594400			43827	9841	29311	29324	49676	49676					0.16398107244822313
PTLLKVLPAGG	11	Unmodified	_PTLLKVLPAGG_					0	0	0		ENSG00000181240|ENST00000321510|SLC25A41	ENSG00000181240|ENST00000321510|SLC25A41	ENSG00000181240|ENST00000321510|SLC25A41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.3399047851562	2	533.336967	1064.65938	3.0971	0.0016518	2.9068	0.0015503	6.0039	0.0032021	533.3384140007198	99.339	2.8367	99.285	98.69	101.53	-0.053741					182	66	5	0	0	0	0.7434	1	10780	10780		23.523	0.48021	1	3163800			43828	7379	29312	29325	49677	49677					0.1296376592517845
PTLLPHFPMTT	11	Unmodified	_PTLLPHFPMTT_					0	0	0		ENSG00000140836|ENST00000268489|ZFHX3;chr16:73456258-73680180|53|17.49|0.14|6.93|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73318336-73456003|47|12.38|0.07|7.55|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73257136-73318240|51|12.71|0.0|20.28|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73143831-73257047|49|21.06|0.1|7.71|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73131094-73143752|54|16.8|0.2|6.36|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73093598-73130968|46|12.0|0.08|7.25|-|ENST00000641206|ZFHX3,ZFHX3;nc|ENSG00000140836|Q15911-2|ZFHX3;chr16:72950965-73058530|60|21.05|0.31|6.07|-|ENST00000397992|ZFHX3,ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.38623046875	2	627.831191	1253.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.9	1	118.82	118.32	119.32	-0.07531								0	0	0	0.56276	1	12756	12756		32.812	0.061884	1				43829	208	29313	29326	49678	49678					0.031152008395110897
PTLLRPRVEQR	11	Unmodified	_PTLLRPRVEQR_					0	0	0		ENST00000261867.4_1_15:45814833-45814980:-|nuORF	ENST00000261867.4_1_15:45814833-45814980:-|nuORF	ENST00000261867.4_1_15:45814833-45814980:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.60955810546875	3	455.608882	1363.80482	-1.1288	-0.00051429	-0.0017301	-7.8825E-07	-1.1305	-0.00051508	455.60885285042644	70.049	0.77111	70.12	69.911	70.682	0.071037					62	37	2	0	0	0	0.73647	1	6353	6353		25.068	0.83596	1	789440			43830	9421	29314	29327	49679	49679					0.13746621774066625
PTLLRPRVEQR	11	Unmodified	_PTLLRPRVEQR_					0	0	0		ENST00000261867.4_1_15:45814833-45814980:-|nuORF	ENST00000261867.4_1_15:45814833-45814980:-|nuORF	ENST00000261867.4_1_15:45814833-45814980:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6085205078125	3	455.608882	1363.80482	-1.1702	-0.00053316	0.058698	2.6743E-05	-1.1115	-0.00050642	455.6088473881977	71.256	2.1835	71.333	70.628	72.811	0.076225					206	91	3	0	0	0	0.69687	2	6474	6474;6483		32.034	5.2844	1	589510			43831	9421	29314	29327	49680;49681	49680					0.13746621774066625
PTLLRPRVEQR	11	Unmodified	_PTLLRPRVEQR_					0	0	0		ENST00000261867.4_1_15:45814833-45814980:-|nuORF	ENST00000261867.4_1_15:45814833-45814980:-|nuORF	ENST00000261867.4_1_15:45814833-45814980:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6076965332031	3	455.608882	1363.80482	-0.55128	-0.00025117	-0.41199	-0.00018771	-0.96328	-0.00043888	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.71394	1	6935	6935		29.245	4.119	1	1732400			43832	9421	29314	29327	49682	49682					0.13746621774066625
PTLLRPRVEQR	11	Unmodified	_PTLLRPRVEQR_					0	0	0		ENST00000261867.4_1_15:45814833-45814980:-|nuORF	ENST00000261867.4_1_15:45814833-45814980:-|nuORF	ENST00000261867.4_1_15:45814833-45814980:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.60858154296875	3	455.608882	1363.80482	-0.20528	-9.3526E-05	-0.84962	-0.00038709	-1.0549	-0.00048062	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.6396	1	7429	7429		39.873	12.229	1	1835000			43833	9421	29314	29327	49683	49683					0.13746621774066625
PTLLRPRVEQR	11	Unmodified	_PTLLRPRVEQR_					0	0	0		ENST00000261867.4_1_15:45814833-45814980:-|nuORF	ENST00000261867.4_1_15:45814833-45814980:-|nuORF	ENST00000261867.4_1_15:45814833-45814980:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6061096191406	3	455.608882	1363.80482	-0.22342	-0.00010179	-0.82695	-0.00037677	-1.0504	-0.00047856	455.6084251791674	69.831	3.554	70.377	70.039	73.593	0.54693					191	88	3	0	0	0	0.64752	1	7712	7712		38.96	5.9202	1	1270100			43834	9421	29314	29327	49684	49684					0.13746621774066625
PTLNPFTY	8	Unmodified	_PTLNPFTY_					0	0	0		ENSG00000177535|ENST00000641149|OR2B11	ENSG00000177535|ENST00000641149|OR2B11	ENSG00000177535|ENST00000641149|OR2B11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.74224853515625	2	476.742368	951.470183	-0.99369	-0.00047373	1.7555	0.00083692	0.76181	0.00036319	476.74302300808216	78.629	0.84048	78.681	78.157	78.998	0.051674					33	22	2	0	0	0	0.91977	1	7740	7740		45.952	8.9235	1	129950			43835	7145	29315	29328	49685	49685					-0.007493063681408785
PTLQLTRLKKK	11	Unmodified	_PTLQLTRLKKK_					0	0	0			REV__ENSG00000134899|ENST00000652225|ERCC5	REV__ENSG00000134899|ENST00000652225|ERCC5	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.630859375	3	442.625761	1324.85546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.92	1	116.95	116.45	117.45	0.026466								0	0	0	0.56276	1	12847	12847		17.833	4.3252	1		+		43836	19175	29316	29329	49686	49686					0.20602151099024013
PTLREKRLQL	10	Unmodified	_PTLREKRLQL_					0	0	0		nc|ENSG00000204872|Q9UHF3|NAT8B;ENSG00000144035|ENST00000272425|NAT8	nc|ENSG00000204872|Q9UHF3|NAT8B	nc|ENSG00000204872|Q9UHF3|NAT8B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3930053710938	2	627.388054	1252.76155	6.4023	0.0040167	-3.0227	-0.0018964	3.3796	0.0021203	627.3865068080735	110.02	0.12105	110.09	109.98	110.1	0.068001					7	5	2	0	0	0	0.37624	1	13349	13349		12.207	0	1	240650			43837	15215	29317	29330	49687	49687					0.1452843199679137
PTLRHLFL	8	Unmodified	_PTLRHLFL_					0	0	0		nc|ENSG00000197901|Q4U2R8-3|SLC22A6;nc|ENSG00000197901|Q4U2R8-4|SLC22A6;ENSG00000197901|ENST00000360421|SLC22A6;nc|ENSG00000197901|Q4U2R8|SLC22A6	nc|ENSG00000197901|Q4U2R8-3|SLC22A6	nc|ENSG00000197901|Q4U2R8-3|SLC22A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.80389404296875	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.82464	1	4432	4432		21.702	1.2205	1	2702800			43838	8211	29318	29331	49688	49688					0.09366360785031702
PTLRRTGKP	9	Unmodified	_PTLRRTGKP_					0	0	0		ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;ENST00000367112.1_2_6:158500311-158517393:+|nuORF	ENSG00000078269|ENST00000355585|SYNJ2	ENSG00000078269|ENST00000355585|SYNJ2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8175048828125	2	513.314358	1024.61416	0.39078	0.00020059	4.0535	0.0020807	4.4443	0.0022813	513.3164630994114	53.539	1.8096	53.62	52.959	54.769	0.081528					78	48	3	0	0	0	0.73802	1	4406	4406		37.812	1.3648	1	262680			43839	1394	29319	29332	49689	49689					0.10283960182664487
PTLRRVSA	8	Unmodified	_PTLRRVSA_					0	0	0			REV__nc|ENSG00000106633|P35557-3|GCK	REV__nc|ENSG00000106633|P35557-3|GCK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2745361328125	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.87479	1	9602	9602		30.504	1.3541	1	41438000	+		43840	17621	29320	29333	49690	49690					0.08152313228515595
PTNEVDLFGL	10	Unmodified	_PTNEVDLFGL_					0	0	0			REV__ENST00000498262.1_1_1:244998983-245005526:+|nuORF	REV__ENST00000498262.1_1_1:244998983-245005526:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.2830810546875	2	552.782222	1103.54989	-0.72787	-0.00040235	-4.069	-0.0022493	-4.7969	-0.0026516	553.2821646772004	59.733	0.4664	59.719	59.393	59.859	-0.013733					19	11	2	0	0	0	0.80179	1	5494	5494		39.253	4.0521	1	65598	+		43841	23433	29321	29334	49691	49691					0.0022571551519376953
PTNEVDLFGL	10	Unmodified	_PTNEVDLFGL_					0	0	0			REV__ENST00000498262.1_1_1:244998983-245005526:+|nuORF	REV__ENST00000498262.1_1_1:244998983-245005526:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	552.782222	1103.54989	-0.72787	-0.00040235	-4.069	-0.0022493	-4.7969	-0.0026516	553.2821646772004	59.733	0.4664	59.719	59.393	59.859	-0.013733	0.04775	0.00023907	NaN	39.253	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65598	+		43842	23433	29321	29334							0.0022571551519376953
PTNEVDLFGL	10	Unmodified	_PTNEVDLFGL_					0	0	0			REV__ENST00000498262.1_1_1:244998983-245005526:+|nuORF	REV__ENST00000498262.1_1_1:244998983-245005526:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	552.782222	1103.54989	-0.48736	-0.0002694	-4.5665	-0.0025243	-5.0539	-0.0027937	552.7790256559047	59.59	0.77487	59.623	59.217	59.992	0.032825	-0.04775	-0.00031095	NaN	39.253	23	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55154	+		43843	23433	29321	29334							0.0022571551519376953
PTPAKVSR	8	Unmodified	_PTPAKVSR_					0	0	0		ENST00000324913.9_1_2:113342105-113343561:+|nuORF	ENST00000324913.9_1_2:113342105-113343561:+|nuORF	ENST00000324913.9_1_2:113342105-113343561:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	427.30279541015625	2	428.255977	854.497401	-1.3087	-0.00056047	0.33206	0.00014221	-0.97667	-0.00041827	428.2561065729134	72.766	1.0789	72.846	72.216	73.295	0.080025					44	36	2	0	0	0	0.4196	1	6660	6660		10.866	0	1	60967			43844	10067	29322	29335	49692	49692					0.0643322196290228
PTPAQHPG	8	Unmodified	_PTPAQHPG_					0	0	0		nc|ENSG00000169994|Q6PIF6-2|MYO7B	nc|ENSG00000169994|Q6PIF6-2|MYO7B	nc|ENSG00000169994|Q6PIF6-2|MYO7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.7028503417969	2	402.703577	803.392602	-0.36836	-0.00014834	1.0574	0.00042581	0.68901	0.00027747	402.70395527880777	25.237	0.74186	25.196	24.803	25.545	-0.041168					28	19	2	0	0	0	0.91005	1	1066	1066		42.474	6.8562	1	52623			43845	15086	29323	29336	49693	49693					-0.016958995136633348
PTPASEPE	8	Unmodified	_PTPASEPE_					0	0	0		ENSG00000162408|ENST00000377705|NOL9;ENST00000464665.1_1_1:6609704-6614547:-|nuORF	ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.1941833496094	2	414.192708	826.370863	0.5348	0.00022151	-0.62855	-0.00026034	-0.09375	-3.8831E-05	414.1926453401636	78.69	0.5629	78.829	78.555	79.118	0.13883					23	14	2	0	0	0	0.4196	1	7457	7457		12.959	0	1	134480			43846	5685	29324	29337	49694	49694					-0.04926749052901869
PTPASTASTL	10	Unmodified	_PTPASTASTL_					0	0	0			REV__ENST00000216181.9_1_22:36678235-36678298:-|nuORF	REV__ENST00000216181.9_1_22:36678235-36678298:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.2485046386719	2	473.248015	944.481476	0.34188	0.00016179	-0.18615	-8.8093E-05	0.15574	7.3701E-05	473.24782054202086	28.883	1.4946	28.914	28.31	29.804	0.030945					99	51	4	0	0	0	0.64457	2	1413	1413;1420		47.657	3.5405	1	514570	+		43847	24124	29325	29338	49695;49696	49695					0.00701470935348425
PTPATTPAPAP	11	Unmodified	_PTPATTPAPAP_					0	0	0		ENSG00000100092|ENST00000649765|SH3BP1;ENST00000466097.1_1_22:38042800-38046733:+|nuORF;ENST00000417536.5_1_22:38046171-38052013:+|nuORF	ENSG00000100092|ENST00000649765|SH3BP1;ENST00000417536.5_1_22:38046171-38052013:+|nuORF	ENSG00000100092|ENST00000649765|SH3BP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.7720642089844	2	510.771657	1019.52876	-0.054481	-2.7827E-05	0.37788	0.00019301	0.3234	0.00016518	510.77161955919803	71.85	0.62404	71.887	71.636	72.26	0.037148					45	23	3	0	0	0	0.43408	1	6816	6816		56.721	10.769	1	215000			43848	1794;11413	29326	29339	49697	49697					0.01977750206322071
PTPATTPAPAP	11	Unmodified	_PTPATTPAPAP_					0	0	0		ENSG00000100092|ENST00000649765|SH3BP1;ENST00000466097.1_1_22:38042800-38046733:+|nuORF;ENST00000417536.5_1_22:38046171-38052013:+|nuORF	ENSG00000100092|ENST00000649765|SH3BP1;ENST00000417536.5_1_22:38046171-38052013:+|nuORF	ENSG00000100092|ENST00000649765|SH3BP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	510.771657	1019.52876	-0.42791	-0.00021856	-0.3743	-0.00019118	-0.80221	-0.00040975	511.273361795435	72.147	0.070442	72.107	72.068	72.138	-0.040382	0.10997	-0.00072398	NaN	56.721	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24653			43849	1794;11413	29326	29339							0.01977750206322071
PTPEGVPAPA	10	Unmodified	_PTPEGVPAPA_					0	0	0		nc|ENSG00000142186|Q96KG9-6|SCYL1;nc|ENSG00000142186|Q96KG9-4|SCYL1;ENSG00000142186|ENST00000270176|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.2453918457031	2	468.245275	934.475997	-0.27928	-0.00013077	0.30581	0.00014319	0.026523	1.2419E-05	468.2452890208871	47.437	2.6016	47.349	46.711	49.313	-0.08765					186	72	4	0	0	0	0.67608	1	3613	3613		45.952	1.8352	1	6668700			43850	14969	29327	29340	49698	49698					0.006137921435083626
PTPHGHGTWAS	11	Unmodified	_PTPHGHGTWAS_					0	0	0			REV__nc|ENSG00000157554|P11308-5|ERG	REV__nc|ENSG00000157554|P11308-5|ERG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.2655029296875	2	574.267604	1146.52066	-1.0379	-0.00059601	0.52476	0.00030135	-0.51309	-0.00029465	574.2679555287965	101.91	7.362	101.93	99.773	107.14	0.01989					246	175	2	0	0	0	0.70737	1	10960	10960		30.318	0	1	256800	+		43851	15787	29328	29341	49699	49699					-0.04674383990413844
PTPHGHGTWAS	11	Unmodified	_PTPHGHGTWAS_					0	0	0			REV__nc|ENSG00000157554|P11308-5|ERG	REV__nc|ENSG00000157554|P11308-5|ERG	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	574.267604	1146.52066	1.2228	0.00070223	-1.988	-0.0011416	-0.76518	-0.00043942	574.7677334329452	101.73	1.1839	101.99	101.69	102.88	0.26323	0.028101	-0.0026488	NaN	30.318	73	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	427250	+		43852	15787	29328	29341							-0.04674383990413844
PTPLDPEET	9	Unmodified	_PTPLDPEET_					0	0	0		ENST00000487235.5_1_1:153921840-153927447:-|nuORF;ENSG00000160741|ENST00000368633|CRTC2	ENST00000487235.5_1_1:153921840-153927447:-|nuORF	ENST00000487235.5_1_1:153921840-153927447:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	499.736572265625	2	499.73748	997.460406	-1.3624	-0.00068084	3.2242	0.0016113	1.8618	0.00093043	499.7387706278585	32.631	0.45388	32.629	32.493	32.947	-0.0016365					16	10	2	0	0	0	0.78058	1	1869	1869		30.504	2.6214	1	24399			43853	5602	29329	29342	49700	49700					-0.038425391641794704
PTPLDPEET	9	Unmodified	_PTPLDPEET_					0	0	0		ENST00000487235.5_1_1:153921840-153927447:-|nuORF;ENSG00000160741|ENST00000368633|CRTC2	ENST00000487235.5_1_1:153921840-153927447:-|nuORF	ENST00000487235.5_1_1:153921840-153927447:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	499.73748	997.460406	0.12362	6.1776E-05	2.2728	0.0011358	2.3965	0.0011976	499.7379358595074	32.581	0.36584	32.592	32.492	32.858	0.010899	-0.051746	-0.00054293	NaN	30.504	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19183			43854	5602	29329	29342							-0.038425391641794704
PTPLDPEET	9	Unmodified	_PTPLDPEET_					0	0	0		ENST00000487235.5_1_1:153921840-153927447:-|nuORF;ENSG00000160741|ENST00000368633|CRTC2	ENST00000487235.5_1_1:153921840-153927447:-|nuORF	ENST00000487235.5_1_1:153921840-153927447:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	499.73748	997.460406	-0.21659	-0.00010824	2.4208	0.0012098	2.2042	0.0011015	499.73801637120073	32.764	0.51453	32.71	32.491	33.006	-0.05434	0.06592	-0.00039502	NaN	30.504	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36939			43855	5602	29329	29342							-0.038425391641794704
PTPLLLSA	8	Unmodified	_PTPLLLSA_					0	0	0			REV__ENST00000477309.1_1_1:150128305-150129117:+|nuORF	REV__ENST00000477309.1_1_1:150128305-150129117:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2489013671875	2	406.249829	810.485105	-0.96192	-0.00039078	-1.7817	-0.00072381	-2.7436	-0.0011146	406.24902234521767	111.59	0.90381	111.59	111.1	112	0					62	31	3	0	0	0	0.85277	1	11622	11622		25.45	4.9683	1	63667	+		43856	27355	29330	29343	49701	49701					0.07228185499843676
PTPRAPAR	8	Unmodified	_PTPRAPAR_					0	0	0		ENST00000377575.2_1_6:26538639-26545486:+|nuORF	ENST00000377575.2_1_6:26538639-26545486:+|nuORF	ENST00000377575.2_1_6:26538639-26545486:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.5976867675781	2	433.253769	864.492984	0.73522	0.00031854	1.2199	0.00052854	1.9552	0.00084708	433.2550173267258	107.12	1.2179	107.21	106.73	107.95	0.091255					137	29	6	0	0	0	0.4196	1	11435	11435		21.96	4.5949	1	118330000			43857	10841	29331	29344	49702	49702					0.05531757539984028
PTPSFRLG	8	Unmodified	_PTPSFRLG_					0	0	0			REV__ENST00000290158.8_1_17:45761520-45761586:+|nuORF	REV__ENST00000290158.8_1_17:45761520-45761586:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77142333984375	2	437.742702	873.470852	0.2432	0.00010646	1.1482	0.00050263	1.3914	0.00060909	437.7429232968612	36.447	0.7861	36.728	36.388	37.175	0.28173					24	18	2	0	0	0	0.4196	1	2875	2875		33.516	0	1	66241	+		43858	24655	29332	29345	49703	49703					0.029055330715891614
PTQCRHRARA	10	Unmodified	_PTQCRHRARA_					0	0	0			REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31	REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	598.3140869140625	2	598.314897	1194.61524	0.62039	0.00037119	1.7802	0.0010651	2.4006	0.0014363	598.3158612505514	69.83	0.59485	69.959	69.822	70.417	0.1291					45	29	2	0	0	0	0.86587	1	6354	6354		29.17	2.4771	1	810890	+		43859	20506	29333	29346	49704	49704					0.02571851279913062
PTQFIQLVN	9	Unmodified	_PTQFIQLVN_					0	0	0			REV__nc|ENSG00000066294|Q9UIB8-7|CD84	REV__nc|ENSG00000066294|Q9UIB8-7|CD84	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2933349609375	2	530.295299	1058.57605	0.74166	0.0003933	-4.3452	-0.0023043	-3.6036	-0.001911	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.75725	1	9227	9227		36.447	0.82846	1	2081200	+		43860	16521	29334	29347	49705	49705					0.049100294773325004
PTQFKLVLDS	10	Unmodified	_PTQFKLVLDS_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3196411132812	2	574.321514	1146.62847	0.59155	0.00033974	-4.0871	-0.0023473	-3.4955	-0.0020075	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.78666	1	9782	9782		40.058	4.4399	1	1777600			43861	1492	29335	29348	49706	49706					0.06102567820266813
PTQKKYQIA	9	Unmodified	_PTQKKYQIA_					0	0	0		ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.8065795898438	2	538.808574	1075.60259	-1.4886	-0.00080208	-1.9733	-0.0010633	-3.462	-0.0018653	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.76255	1	8983	8983		35.618	5.3006	1	783690			43862	1276	29336	29349	49707	49707					0.06781718368665679
PTQLLPIHN	9	Unmodified	_PTQLLPIHN_					0	0	0		ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.793701171875	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.76764	1	8726	8726		34.173	0.65696	1	817800			43863	1027	29337	29350	49708	49708					0.06185449197187154
PTQMGLRISGL	11	Unmodified	_PTQMGLRISGL_					0	0	0		nc|ENSG00000139405|Q96K30-2|RITA1	nc|ENSG00000139405|Q96K30-2|RITA1	nc|ENSG00000139405|Q96K30-2|RITA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.8236083984375	2	586.82644	1171.63833	-0.26066	-0.00015296	-4.2485	-0.0024931	-4.5092	-0.0026461	586.8238105998267	110.35	1.3355	110.35	110.09	111.43	0					132	40	5	0	0	0	0.70737	1	11496	11496		30.318	1.1477	1	4860400			43864	14958	29338	29351	49709	49709					0.059374325540147765
PTQNTIRK	8	Unmodified	_PTQNTIRK_					0	0	0		ENSG00000198924|ENST00000361384|DCLRE1A	ENSG00000198924|ENST00000361384|DCLRE1A	ENSG00000198924|ENST00000361384|DCLRE1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2778015136719	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.84341	1	8466	8466		24.203	0.68005	1	7438100			43865	8370	29339	29352	49710	49710					0.06031992020314192
PTQRRKNR	8	Unmodified	_PTQRRKNR_					0	0	0			REV__ENSG00000101752|ENST00000261537|MIB1	REV__ENSG00000101752|ENST00000261537|MIB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7838745117188	2	528.312681	1054.61081	2.0481	0.001082	0.62125	0.00032821	2.6694	0.0014103	528.3130231793535	98.035	1.1069	98.421	97.973	99.08	0.38549					42	26	2	0	0	0	0.4196	1	11767	11767		21.96	0	1	246500	+		43866	17301	29340	29353	49711	49711					0.08568710128656676
PTQVKNRP	8	Unmodified	_PTQVKNRP_					0	0	0		ENSG00000089220|ENST00000261313|PEBP1;ENST00000603980.1_1_2:85568802-85568865:-|nuORF	ENSG00000089220|ENST00000261313|PEBP1	ENSG00000089220|ENST00000261313|PEBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.2719421386719	2	470.272158	938.529764	0.099415	4.6752E-05	-0.22805	-0.00010725	-0.12864	-6.0495E-05	470.2720226453988	92.144	2.4368	92.19	91.141	93.578	0.045456					134	57	4	0	0	0	0.84341	1	9662	9662		24.203	0	1	1955400			43867	1618	29341	29354	49712	49712					0.058040093658974
PTRGRFLL	8	Unmodified	_PTRGRFLL_					0	0	0		ENST00000215061.8_1_19:17339762-17340002:+|nuORF	ENST00000215061.8_1_19:17339762-17340002:+|nuORF	ENST00000215061.8_1_19:17339762-17340002:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2375183105469	2	480.292894	958.571235	-0.59692	-0.0002867	-1.0124	-0.00048625	-1.6093	-0.00077295	480.2923407550921	52.287	0.49657	52.954	52.756	53.253	0.6673					19	11	2	0	0	0	0.4196	1	5254	5254		30.504	1.3541	1	342370			43868	9112	29342	29355	49713	49713					0.0902919012522716
PTRHKVKTQI	10	Unmodified	_PTRHKVKTQI_					0	0	0			REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.36767578125	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.8608	1	12398	12398		34.173	13.226	1	3346600	+		43869	17004	29343	29356	49714	49714					0.12459876308275852
PTRHTLVKKVS	11	Unmodified	_PTRHTLVKKVS_					0	0	0		ENSG00000099904|ENST00000334554|ZDHHC8;nc|ENSG00000099904|Q9ULC8-2|ZDHHC8	ENSG00000099904|ENST00000334554|ZDHHC8	ENSG00000099904|ENST00000334554|ZDHHC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.59271240234375	3	422.594461	1264.76155	-0.12961	-5.4774E-05	-3.0685	-0.0012967	-3.1981	-0.0013515	422.59301325163335	54.438	1.5298	54.43	53.553	55.082	-0.0077057					142	48	4	0	0	0	0.72374	1	4786	4786		27.644	3.4121	1	1173800			43870	1776	29344	29357	49715	49715					0.13976431996775318
PTRIPIPIAR	10	Unmodified	_PTRIPIPIAR_					0	0	0		ENSG00000187048|ENST00000310638|CYP4A11	ENSG00000187048|ENST00000310638|CYP4A11	ENSG00000187048|ENST00000310638|CYP4A11	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.6131591796875	2	567.361308	1132.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.493	1	74.493	73.993	74.993	0								0	0	0	0.45132	1	6718	6718		19.104	2.6304	1				43871	7836	29345	29358	49716	49716					0.14701679284939928
PTRLLRKLNN	10	Unmodified	_PTRLLRKLNN_					0	0	0			REV__ENST00000513882.5_1_5:16916319-16916484:-|nuORF	REV__ENST00000513882.5_1_5:16916319-16916484:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.9222717285156	3	408.922689	1223.74624	2.7179	0.0011114	-3.8241	-0.0015638	-1.1062	-0.00045236	408.92110256360985	104.72	4.0561	104.68	103.08	107.14	-0.04039					239	96	4	0	0	0	0.86718	1	11501	11501		32.751	19.793	1	3838400	+		43872	28000	29346	29359	49717	49717					0.14331565199631768
PTRPDLKVILM	11	Unmodified	_PTRPDLKVILM_					0	0	0		ENSG00000134815|ENST00000328771|DHX34	ENSG00000134815|ENST00000328771|DHX34	ENSG00000134815|ENST00000328771|DHX34	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8821411132812	2	641.881216	1281.74788	1.4722	0.00094496	0.4387	0.00028159	1.9109	0.0012266	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.67778	1	11635	11635		35.152	1.2304	1	4511200			43873	3960	29347	29360	49718	49718					0.11827438173349947
PTRPYIDL	8	Unmodified	_PTRPYIDL_					0	0	0			REV__ENST00000547496.5_1_12:89853476-89885774:-|nuORF	REV__ENST00000547496.5_1_12:89853476-89885774:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7906799316406	2	487.768917	973.523281	-1.0544	-0.0005143	4.2825	0.0020889	3.2281	0.0015746	487.772242384633	84.457	0.17437	84.457	84.351	84.525	0					5	3	2	0	0	0	0.4196	1	7950	7950		17.365	0	1	14303	+		43874	19534	29348	29361	49719	49719					0.03546071414530161
PTRQLPQQKGL	11	Unmodified	_PTRQLPQQKGL_					0	0	0			REV__ENST00000354179.8_2_5:176721804-176722098:+|nuORF	REV__ENST00000354179.8_2_5:176721804-176722098:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3702392578125	2	633.369861	1264.72517	-0.087569	-5.5464E-05	-0.98413	-0.00062332	-1.0717	-0.00067878	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.60058	1	9992	9992		44.377	1.981	1	7059800	+		43875	25351	29349	29362	49720	49720					0.1033955510006308
PTRTSSESIY	10	Unmodified	_PTRTSSESIY_					0	0	0		nc|ENSG00000099204|O14639-3|ABLIM1;nc|ENSG00000099204|O14639-5|ABLIM1;nc|ENSG00000099204|O14639-2|ABLIM1;nc|ENSG00000099204|O14639-6|ABLIM1;ENSG00000099204|ENST00000533213|ABLIM1	nc|ENSG00000099204|O14639-3|ABLIM1	nc|ENSG00000099204|O14639-3|ABLIM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.7800903320312	2	570.78021	1139.54587	1.1603	0.00066225	-1.0197	-0.000582	0.1406	8.0251E-05	570.7794700070763	24.905	0.78845	24.868	24.536	25.325	-0.037178					40	18	3	0	0	0	0.86218	1	954	954		32.812	0.85756	1	146700			43876	1748	29350	29363	49721	49721					-0.0183237397850462
PTRVNLLRIK	10	Unmodified	_PTRVNLLRIK_					0	0	0			REV__ENST00000530867.1_1_11:9199613-9200479:-|nuORF	REV__ENST00000530867.1_1_11:9199613-9200479:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9289855957031	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.802	1	47.715	47.215	48.215	-0.087646								0	0	0	0.45132	1	3600	3600		9.6461	2.2464	1		+		43877	22642	29351	29364	49722	49722					0.17569039722025082
PTSDLAVDG	9	Unmodified	_PTSDLAVDG_					0	0	0		ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7091369628906	2	437.711265	873.407977	-1.7194	-0.00075261	-1.6684	-0.00073029	-3.3878	-0.0014829	437.7101731288724	85.236	1.0846	85.385	84.753	85.838	0.14952					34	24	2	0	0	0	0.78536	1	8287	8287		29.15	0	1	150990			43878	9955	29352	29365	49723	49723					-0.03379077507122474
PTSDLAVDG	9	Unmodified	_PTSDLAVDG_					0	0	0		ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	437.711265	873.407977	-0.16107	-7.0503E-05	-3.0538	-0.0013367	-3.2148	-0.0014072	437.70957433162977	85.421	0.82733	85.488	85.073	85.9	0.067261	0.026061	0.00051406	NaN	29.15	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147420			43879	9955	29352	29365							-0.03379077507122474
PTSDLAVDG	9	Unmodified	_PTSDLAVDG_					0	0	0		ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	437.711265	873.407977	1.8217	0.00079737	-5.1136	-0.0022383	-3.2919	-0.0014409	437.70866790300073	85.378	1.0402	85.436	85.065	86.105	0.057899	-0.026582	-0.0012891	NaN	29.15	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106330			43880	9955	29352	29365							-0.03379077507122474
PTSDLAVDG	9	Unmodified	_PTSDLAVDG_					0	0	0		ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	437.711265	873.407977	-1.5049	-0.0006587	-2.0992	-0.00091882	-3.604	-0.0015775	437.71004707672734	85.111	1.2921	85.287	84.617	85.909	0.17561	-0.1755	0.0013497	NaN	29.15	40	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153670			43881	9955	29352	29365							-0.03379077507122474
PTSDLAVDG	9	Unmodified	_PTSDLAVDG_					0	0	0		ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	437.711265	873.407977	0.59818	0.00026183	-4.0005	-0.0017511	-3.4023	-0.0014892	437.70924083786826	85.17	0.864	85.319	85.037	85.901	0.14857	-0.14334	-0.00031473	NaN	29.15	30	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150530			43882	9955	29352	29365							-0.03379077507122474
PTSDLAVDG	9	Unmodified	_PTSDLAVDG_					0	0	0		ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	437.711265	873.407977	-0.42349	-0.00018537	-3.7038	-0.0016212	-4.1273	-0.0018066	437.7094765272451	85.211	1.9048	85.651	85.067	86.972	0.43967	0.18859	-5.4977E-05	NaN	29.15	69	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	498150			43883	9955	29352	29365							-0.03379077507122474
PTSDLAVDG	9	Unmodified	_PTSDLAVDG_					0	0	0		ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	ENST00000313766.5_7:300492-300642:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	437.711265	873.407977	-0.087909	-3.8479E-05	-4.0623	-0.0017781	-4.1502	-0.0018166	437.7093349328845	85.223	1.5345	85.67	85.033	86.568	0.44736	0.2079	-0.00036886	NaN	29.15	59	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	470610			43884	9955	29352	29365							-0.03379077507122474
PTSPFDRGA	9	Unmodified	_PTSPFDRGA_					0	0	0			REV__ENST00000552168.1_1_12:53455887-53456624:+|nuORF	REV__ENST00000552168.1_1_12:53455887-53456624:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.2333984375	2	474.232699	946.450845	-2.3357	-0.0011076	2.05	0.00097216	-0.2857	-0.00013549	474.23360634784694	39.838	0.93525	39.847	39.428	40.363	0.0092812					32	21	2	0	0	0	0.64922	1	2832	2832		44.117	1.7207	1	349550	+		43885	28617	29353	29366	49724	49724					-0.0245226265905103
PTSQKSFIG	9	Unmodified	_PTSQKSFIG_					0	0	0		ENST00000521207.1_1_8:144363486-144363774:-|nuORF	ENST00000521207.1_1_8:144363486-144363774:-|nuORF	ENST00000521207.1_1_8:144363486-144363774:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.75775146484375	2	482.758549	963.502546	-1.5379	-0.00074243	1.8222	0.00087968	0.2843	0.00013725	482.7591722888061	38.94	0.77379	39.495	39.236	40.01	0.5545					34	17	3	0	0	0	0.58668	1	3251	3251		47.657	3.2801	1	398930			43886	13168	29354	29367	49725	49725					0.019334810348595965
PTSRLVKPVEK	11	Unmodified	_PTSRLVKPVEK_					0	0	0		ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	ENSG00000205413|ENST00000379958|SAMD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3856201171875	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.68532	1	12806	12806		33.922	8.3476	1	19815000			43887	8529	29355	29368	49726	49726					0.1340560990265658
PTSTARTARPL	11	Unmodified	_PTSTARTARPL_					0	0	0		ENST00000568681.1_1_16:30106105-30106165:-|nuORF;ENST00000398841.5_1_16:30104053-30106165:-|nuORF	ENST00000568681.1_1_16:30106105-30106165:-|nuORF	ENST00000568681.1_1_16:30106105-30106165:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	586.8070068359375	2	585.833111	1169.65167	-1.9648	-0.001151	-2.9561	-0.0017318	-4.9209	-0.0028828	585.8311169559728	59.234	0.99246	59.267	58.841	59.834	0.033905					39	25	2	0	0	0	0.17273	1	5480	5480		36.318	8.4354	1	73107			43888	11193	29356	29369	49727	49727					0.07363006657601545
PTSTARTARPL	11	Unmodified	_PTSTARTARPL_					0	0	0		ENST00000568681.1_1_16:30106105-30106165:-|nuORF;ENST00000398841.5_1_16:30104053-30106165:-|nuORF	ENST00000568681.1_1_16:30106105-30106165:-|nuORF	ENST00000568681.1_1_16:30106105-30106165:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	585.833111	1169.65167	0.51211	0.00030001	-6.9627	-0.004079	-6.4506	-0.0037789	585.8285737104296	59.265	0.65256	59.379	59.073	59.725	0.11397	0.079206	-0.0022092	NaN	36.318	31	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69905			43889	11193	29356	29369							0.07363006657601545
PTSTPSSLL	9	Unmodified	_PTSTPSSLL_					0	0	0			REV__ENST00000444527.2_1_8:56367431-56367641:-|nuORF	REV__ENST00000444527.2_1_8:56367431-56367641:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7449951171875	2	451.745108	901.475663	-0.010196	-4.6062E-06	1.0103	0.0004564	1.0001	0.0004518	451.7456051590094	33.34	1.2132	33.338	32.979	34.193	-0.0016365					54	27	3	0	0	0	0.18566	1	1948	1948		76.847	2.8719	1	302940	+		43890	26789	29357	29370	49728	49728					0.020983724236884882
PTSVGRKH	8	Unmodified	_PTSVGRKH_					0	0	0		nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;nc|ENSG00000204120|Q6Y7W6-5|GIGYF2;ENSG00000204120|ENST00000373563|GIGYF2;nc|ENSG00000204120|Q6Y7W6-3|GIGYF2	nc|ENSG00000204120|Q6Y7W6-4|GIGYF2	nc|ENSG00000204120|Q6Y7W6-4|GIGYF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.24908447265625	2	441.251226	880.487899	-0.96478	-0.00042571	-1.1899	-0.00052503	-2.1546	-0.00095074	441.2505832318685	48.855	0.55903	49.315	49.064	49.623	0.45983					28	13	3	0	0	0	0.93529	1	4747	4747		52.299	5.5327	1	1035400			43891	8415	29358	29371	49729	49729					0.04287453677363828
PTTALFRLN	9	Unmodified	_PTTALFRLN_					0	0	0			REV__ENSG00000115414|ENST00000354785|FN1	REV__ENSG00000115414|ENST00000354785|FN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.793212890625	2	516.795466	1031.57638	-1.5587	-0.00080555	-2.3442	-0.0012115	-3.9029	-0.002017	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.76255	1	8839	8839		35.618	1.4457	1	755180	+		43892	18116	29359	29372	49730	49730					0.06185449197187154
PTTITFLTLFL	11	Unmodified	_PTTITFLTLFL_					0	0	0		ENST00000497872.3_1_14:106170727-106170913:-|nuORF;nc|ENSG00000211890|P01877|IGHA2;nc|ENSG00000211895|P01876|IGHA1	ENST00000497872.3_1_14:106170727-106170913:-|nuORF	ENST00000497872.3_1_14:106170727-106170913:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.79541015625	2	633.87084	1265.72713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.373	1	65.411	64.911	65.911	0.037849								0	0	0	0.56276	1	5801	5801		26.693	1.1189	1				43893	12815	29360	29373	49731	49731					0.1048917106531917
PTTKTYFPH	9	Unmodified	_PTTKTYFPH_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.2783203125	2	546.279649	1090.54475	0.018645	1.0185E-05	-0.47183	-0.00025775	-0.45318	-0.00024756	546.2793762004969	49.403	0.79712	49.379	49.103	49.9	-0.024029					25	17	2	0	0	0	0.33718	1	4252	4252		62.107	24.296	1	124820		+	43894	7934;579	29361	29374	49732	49732					0.003094564432331026
PTTKTYFPHF	10	Unmodified	_PTTKTYFPHF_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.5455017089844	3	413.544996	1237.61316	-1.677	-0.00069351	2.5167	0.0010408	0.83976	0.00034728	413.5458900803168	54.051	0.86453	54.051	53.649	54.514	0					63	24	4	0	0	0	0.3872	1	4530	4530		65.157	20.518	1	371350		+	43895	7934;579	29362	29375	49733	49733					0.0038570102308312926
PTTKTYFPHF	10	Unmodified	_PTTKTYFPHF_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.5452575683594	3	413.544996	1237.61316	-0.68468	-0.00028314	1.2688	0.0005247	0.58412	0.00024156	413.5454458568968	54.011	1.1552	53.986	53.433	54.588	-0.024754					86	30	4	0	0	0	0.3872	2	4856	4856;4867		65.157	17.93	1	908290		+	43896	7934;579	29362	29375	49734;49735	49734					0.0038570102308312926
PTTKTYFPHF	10	Unmodified	_PTTKTYFPHF_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.5451354980469	3	413.544996	1237.61316	2.131	0.00088125	-1.6263	-0.00067257	0.50461	0.00020868	413.5442532017817	54.081	1.1283	54.104	53.513	54.641	0.022541					93	34	4	0	0	0	0.47072	2	4792	4792;4800		58.246	23.745	1	939580		+	43897	7934;579	29362	29375	49736;49737	49736					0.0038570102308312926
PTTKTYFPHF	10	Unmodified	_PTTKTYFPHF_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.5451354980469	3	413.544996	1237.61316	0.31259	0.00012927	-0.00079	-3.267E-07	0.3118	0.00012894	413.5449169782461	53.989	1.0018	54.07	53.613	54.615	0.081528					80	25	4	0	0	0	0.24002	5	4436	4424;4436;4447;4459;4471		79.489	33.523	1	1595700		+	43898	7934;579	29362	29375	49738;49739;49740;49741;49742	49739					0.0038570102308312926
PTTKTYFPHF	10	Unmodified	_PTTKTYFPHF_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.818359375	2	619.813856	1237.61316	0.49765	0.00030845	-0.90986	-0.00056394	-0.41221	-0.00025549	619.8133144859956	53.943	0.70232	54.025	53.728	54.43	0.081524					24	17	2	0	0	0	0.85692	1	4463	4463		31.53	2.3598	1	152080		+	43899	7934;579	29362	29375	49743	49743					0.0038570102308312926
PTTKTYFPHF	10	Unmodified	_PTTKTYFPHF_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.545166015625	3	413.544996	1237.61316	-0.70289	-0.00029068	1.0395	0.00042987	0.33659	0.00013919	413.5453534503484	54.029	1.1598	53.967	53.443	54.602	-0.062065					89	31	4	0	0	0	0.28289	5	4462	4427;4439;4451;4462;4475		74.165	30.514	1	1424000		+	43900	7934;579	29362	29375	49744;49745;49746;49747;49748	49747					0.0038570102308312926
PTTKTYFPHF	10	Unmodified	_PTTKTYFPHF_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	620.318359375	2	619.813856	1237.61316	-0.015388	-9.538E-06	-0.49403	-0.00030621	-0.50942	-0.00031574	619.8138949862217	54.043	0.62709	53.981	53.608	54.235	-0.062065					34	15	4	0	0	0	0.81191	1	4437	4437		41.427	13.345	1	241170		+	43901	7934;579	29362	29375	49749	49749					0.0038570102308312926
PTTKTYFPHF	10	Unmodified	_PTTKTYFPHF_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.5450744628906	3	413.544996	1237.61316	0.59475	0.00024595	0.37371	0.00015455	0.96846	0.0004005	413.5450981817741	52.022	1.1597	52.445	51.852	53.012	0.42348					69	27	4	0	0	0	0.18739	5	5172	5162;5172;5184;5195;5206		89.029	20.568	1	2410200		+	43902	7934;579	29362	29375	49750;49751;49752;49753;49754	49751					0.0038570102308312926
PTTKTYFPHF	10	Unmodified	_PTTKTYFPHF_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.5450134277344	3	413.544996	1237.61316	0.45921	0.0001899	0.49956	0.00020659	0.95877	0.00039649	413.545095398812	51.724	0.86133	52.392	51.979	52.84	0.6673					64	20	4	0	0	0	0.19099	4	5168	5146;5157;5168;5179		88.177	46.139	1	2734300		+	43903	7934;579	29362	29375	49755;49756;49757;49758	49757					0.0038570102308312926
PTTKTYFPHF	10	Unmodified	_PTTKTYFPHF_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	413.544996	1237.61316	-0.12599	-5.2103E-05	0.90559	0.0003745	0.7796	0.0003224	413.5452741191918	54.065	0.98182	54.06	53.598	54.58	-0.0053711	0.0093123	8.4007E-05	NaN	79.489	96	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	740290		+	43904	7934;579	29362	29375							0.0038570102308312926
PTTKTYFPHF	10	Unmodified	_PTTKTYFPHF_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	413.544996	1237.61316	-1.8762	-0.0007759	2.3561	0.00097436	0.4799	0.00019846	413.5458912054295	54.061	1.0052	54.117	53.609	54.614	0.055614	0.066112	0.0018836	NaN	79.489	102	32	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1492200		+	43905	7934;579	29362	29375							0.0038570102308312926
PTTLLVTVDKL	11	Unmodified	_PTTLLVTVDKL_					0	0	0			REV__ENST00000527278.5_1_7:64389231-64389459:+|nuORF	REV__ENST00000527278.5_1_7:64389231-64389459:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5817565917969	3	400.579706	1198.71729	3.1799	0.0012738	-1.136	-0.00045505	2.0439	0.00081875	400.5790522363323	116.4	0.81905	116.42	115.99	116.81	0.026466					36	27	2	0	0	0	0.76579	1	12789	12789		18.531	0.69791	1	41735	+		43906	28227	29363	29376	49759	49759					0.1258798305993878
PTTPPVPV	8	Unmodified	_PTTPPVPV_					0	0	0			REV__ENST00000477679.1_1_1:6511829-6520203:+|nuORF	REV__ENST00000477679.1_1_1:6511829-6520203:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2323303222656	2	404.234179	806.453805	-1.8251	-0.00073778	-1.1309	-0.00045714	-2.956	-0.0011949	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.86791	1	8185	8185		28.254	0	1	3315300	+		43907	22895	29364	29377	49760	49760					0.04283612465758324
PTTSRPKATG	10	Unmodified	_PTTSRPKATG_					0	0	0		ENSG00000147010|ENST00000397821|SH3KBP1;nc|ENSG00000147010|Q96B97-2|SH3KBP1;nc|ENSG00000147010|Q96B97-3|SH3KBP1	ENSG00000147010|ENST00000397821|SH3KBP1	ENSG00000147010|ENST00000397821|SH3KBP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2802429199219	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.85981	1	8512	8512		35.152	4.8343	1	1261800			43908	4874	29365	29378	49761	49761					0.039116708121468946
PTTSRPKATG	10	Unmodified	_PTTSRPKATG_					0	0	0		ENSG00000147010|ENST00000397821|SH3KBP1;nc|ENSG00000147010|Q96B97-2|SH3KBP1;nc|ENSG00000147010|Q96B97-3|SH3KBP1	ENSG00000147010|ENST00000397821|SH3KBP1	ENSG00000147010|ENST00000397821|SH3KBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2799377441406	2	508.28018	1014.54581	0.65224	0.00033152	-0.58773	-0.00029873	0.064515	3.2792E-05	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.81117	1	10372	10372		38.754	0.94209	1	1819500			43909	4874	29365	29378	49762	49762					0.039116708121468946
PTTVILLILL	10	Unmodified	_PTTVILLILL_					0	0	0		ENST00000479314.1_1_3:44968183-44974766:-|nuORF;ENSG00000163812|ENST00000424952|ZDHHC3;nc|ENSG00000163812|Q9NYG2-2|ZDHHC3	ENST00000479314.1_1_3:44968183-44974766:-|nuORF	ENST00000479314.1_1_3:44968183-44974766:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.374755859375	2	548.373018	1094.73148	-1.4498	-0.00079504	3.6321	0.0019917	2.1823	0.0011967	548.3748802153438	35.47	1.1138	35.47	34.867	35.98	0					77	29	3	0	0	0	0.8608	1	2006	2006		34.173	11.13	1	301910			43910	5868	29366	29379	49763	49763					0.18790680278902983
PTTVILLILL	10	Unmodified	_PTTVILLILL_					0	0	0		ENST00000479314.1_1_3:44968183-44974766:-|nuORF;ENSG00000163812|ENST00000424952|ZDHHC3;nc|ENSG00000163812|Q9NYG2-2|ZDHHC3	ENST00000479314.1_1_3:44968183-44974766:-|nuORF	ENST00000479314.1_1_3:44968183-44974766:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	548.373018	1094.73148	0.099243	5.4422E-05	2.1924	0.0012023	2.2916	0.0012567	548.3739670688077	35.234	1.3279	35.273	34.915	36.243	0.038643	-0.0803	-0.00056072	NaN	34.173	80	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178940			43911	5868	29366	29379							0.18790680278902983
PTTVILLILL	10	Unmodified	_PTTVILLILL_					0	0	0		ENST00000479314.1_1_3:44968183-44974766:-|nuORF;ENSG00000163812|ENST00000424952|ZDHHC3;nc|ENSG00000163812|Q9NYG2-2|ZDHHC3	ENST00000479314.1_1_3:44968183-44974766:-|nuORF	ENST00000479314.1_1_3:44968183-44974766:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	548.373018	1094.73148	0.25909	0.00014208	1.8915	0.0010372	2.1506	0.0011793	548.3739479735772	35.239	0.96099	35.345	34.92	35.881	0.10604	-0.0085008	-0.00089077	NaN	34.173	58	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	212560			43912	5868	29366	29379							0.18790680278902983
PTTVILLILL	10	Unmodified	_PTTVILLILL_					0	0	0		ENST00000479314.1_1_3:44968183-44974766:-|nuORF;ENSG00000163812|ENST00000424952|ZDHHC3;nc|ENSG00000163812|Q9NYG2-2|ZDHHC3	ENST00000479314.1_1_3:44968183-44974766:-|nuORF	ENST00000479314.1_1_3:44968183-44974766:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	548.373018	1094.73148	0.4187	0.0002296	1.9601	0.0010749	2.3788	0.0013045	548.3740138080972	35.236	1.0876	35.181	34.852	35.939	-0.055149	-0.17215	-0.00081547	NaN	34.173	67	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	240080			43913	5868	29366	29379							0.18790680278902983
PTTYIDDITVT	11	Unmodified	_PTTYIDDITVT_					0	0	0		ENST00000446111.1_1_7:65441155-65445239:-|nuORF;nc|ENSG00000169919|P08236-2|GUSB;ENSG00000169919|ENST00000304895|GUSB	ENST00000446111.1_1_7:65441155-65445239:-|nuORF	ENST00000446111.1_1_7:65441155-65445239:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8182373046875	2	619.811176	1237.6078	0.49765	0.00030845	3.4142	0.0021161	3.9118	0.0024246	619.8133144859956	53.943	0.70232	54.025	53.728	54.43	0.081524					24	17	2	0	0	0	0.6593	1	4428	4428		35.152	9.0886	1	152080			43914	6542	29367	29380	49764	49764					-0.0015006735006863892
PTVARSPRL	9	Unmodified	_PTVARSPRL_					0	0	0			REV__ENST00000425172.1_1_7:155089585-155089690:+|nuORF	REV__ENST00000425172.1_1_7:155089585-155089690:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	499.29888916015625	2	498.801083	995.587613	0.3731	0.0001861	-0.12173	-6.0717E-05	0.25138	0.00012539	498.80309173814476	53.226	0.55856	53.296	53.083	53.642	0.070713					22	15	2	0	0	0	0.64555	1	4329	4329		44.377	11.565	1	55521	+		43915	26531	29368	29381	49765	49765					0.0896427129133599
PTVFVLTRV	9	Unmodified	_PTVFVLTRV_					0	0	0			REV__ENSG00000277932|ENST00000610445|OR52E5	REV__ENSG00000277932|ENST00000610445|OR52E5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3157348632812	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12803	12803		26.693	1.1189	1	4038100	+		43916	24027	29369	29382	49766	49766					0.10343210236646883
PTVIIISSD	9	Unmodified	_PTVIIISSD_					0	0	0		ENST00000515845.5_2_5:102465128-102465254:+|nuORF	ENST00000515845.5_2_5:102465128-102465254:+|nuORF	ENST00000515845.5_2_5:102465128-102465254:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7672424316406	2	472.768583	943.522613	0.74188	0.00035074	-3.5197	-0.001664	-2.7778	-0.0013133	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.78983	1	8468	8468		27.882	3.6795	1	547170			43917	13093	29370	29383	49767	49767					0.04859231974819522
PTVKGRKTG	9	Unmodified	_PTVKGRKTG_					0	0	0		ENST00000506894.5_1_4:176622911-176923710:-|nuORF	ENST00000506894.5_1_4:176622911-176923710:-|nuORF	ENST00000506894.5_1_4:176622911-176923710:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28924560546875	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.09	1	114.06	113.56	114.56	-0.024452								0	0	0	0.3307	1	12633	12633		19.997	0.6368	1				43918	12947	29371	29384	49768	49768					0.0874858239999412
PTVKGRKTG	9	Unmodified	_PTVKGRKTG_					0	0	0		ENST00000506894.5_1_4:176622911-176923710:-|nuORF	ENST00000506894.5_1_4:176622911-176923710:-|nuORF	ENST00000506894.5_1_4:176622911-176923710:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2880859375	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.73	1	118.71	118.21	119.21	-0.024208								0	0	0	0.31117	1	13156	13156		26.693	1.1189	1				43919	12947	29371	29384	49769	49769					0.0874858239999412
PTVKGRKTG	9	Unmodified	_PTVKGRKTG_					0	0	0		ENST00000506894.5_1_4:176622911-176923710:-|nuORF	ENST00000506894.5_1_4:176622911-176923710:-|nuORF	ENST00000506894.5_1_4:176622911-176923710:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2876892089844	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.7932	1	10417	10417		26.693	1.1189	1	48574000			43920	12947	29371	29384	49770	49770					0.0874858239999412
PTVKGRKTG	9	Unmodified	_PTVKGRKTG_					0	0	0		ENST00000506894.5_1_4:176622911-176923710:-|nuORF	ENST00000506894.5_1_4:176622911-176923710:-|nuORF	ENST00000506894.5_1_4:176622911-176923710:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2875061035156	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.78124	2	12341	12219;12341		30.318	3.5216	1	3080300			43921	12947	29371	29384	49771;49772	49772					0.0874858239999412
PTVKGRKTG	9	Unmodified	_PTVKGRKTG_					0	0	0		ENST00000506894.5_1_4:176622911-176923710:-|nuORF	ENST00000506894.5_1_4:176622911-176923710:-|nuORF	ENST00000506894.5_1_4:176622911-176923710:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.288330078125	2	472.287808	942.561064	2.1469	0.001014	-2.0547	-0.00097039	0.092286	4.3586E-05	472.2867264071782	114.66	1.2655	114.67	114.37	115.64	0.0094528					102	61	2	0	0	0	0.77696	1	13830	13830		31.53	7.3271	1	83672			43922	12947	29371	29384	49773	49773					0.0874858239999412
PTVLTRPE	8	Unmodified	_PTVLTRPE_					0	0	0			REV__nc|ENSG00000160593|Q86YT9-4|JAML	REV__nc|ENSG00000160593|Q86YT9-4|JAML	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7628173828125	2	456.761092	911.507631	-1.9444	-0.00088814	2.4902	0.0011374	0.54575	0.00024928	456.7621161931215	34.581	0.56604	34.581	34.339	34.905	0					23	14	2	0	0	0	0.87479	1	1888	1888		30.504	3.8107	1	54298	+		43923	20725	29372	29385	49774	49774					0.04833784897471105
PTVNLLLL	8	Unmodified	_PTVNLLLL_					0	0	0		ENST00000446874.5_1_7:44068127-44068763:-|nuORF;ENST00000477184.5_1_7:102123232-102123718:-|nuORF	ENST00000446874.5_1_7:44068127-44068763:-|nuORF	ENST00000446874.5_1_7:44068127-44068763:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7871398925781	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.81548	1	2519	2519		20.482	0	1	11532000			43924	11841	29373	29386	49775	49775					0.11308733942325944
PTVPFVAFL	9	Unmodified	_PTVPFVAFL_					0	0	0			REV__ENST00000264670.10_1_5:6633270-6633303:-|nuORF	REV__ENST00000264670.10_1_5:6633270-6633303:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.7832336425781	2	495.786579	989.558604	-2.0028	-0.00099297	-2.0018	-0.00099248	-4.0046	-0.0019855	495.78554869215685	56.91	0.43426	56.943	56.729	57.163	0.033184					21	12	2	0	0	0	0.49378	1	5170	5170		52.299	2.2746	1	254500	+		43925	24479	29374	29387	49776	49776					0.0634073394232928
PTVPFVAFL	9	Unmodified	_PTVPFVAFL_					0	0	0			REV__ENST00000264670.10_1_5:6633270-6633303:-|nuORF	REV__ENST00000264670.10_1_5:6633270-6633303:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	495.786579	989.558604	-0.16032	-7.9484E-05	-3.9824	-0.0019744	-4.1428	-0.0020539	495.7845305067305	56.942	0.5784	56.914	56.711	57.289	-0.028664	-0.020939	-0.00071287	NaN	52.299	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206710	+		43926	24479	29374	29387							0.0634073394232928
PTVPFVAFL	9	Unmodified	_PTVPFVAFL_					0	0	0			REV__ENST00000264670.10_1_5:6633270-6633303:-|nuORF	REV__ENST00000264670.10_1_5:6633270-6633303:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	495.786579	989.558604	-2.0028	-0.00099297	-2.0018	-0.00099248	-4.0046	-0.0019855	495.78554869215685	56.91	0.43426	56.943	56.729	57.163	0.033184	0.0083367	0.001251	NaN	52.299	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254500	+		43927	24479	29374	29387							0.0634073394232928
PTVPVPGDRW	10	Unmodified	_PTVPVPGDRW_					0	0	0			REV__ENST00000456883.6_3_12:133405148-133405388:-|nuORF	REV__ENST00000456883.6_3_12:133405148-133405388:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.7571411132812	2	562.298373	1122.58219	-0.62255	-0.00035006	0.75326	0.00042356	0.13071	7.3497E-05	562.2989618535224	47.4	0.62195	48.323	48.041	48.663	0.92315					28	15	2	0	0	0	0.37624	1	4571	4571		30.318	18.807	1	427250	+		43928	26962	29375	29388	49777	49777					0.02580547708839731
PTVQVLLL	8	Unmodified	_PTVQVLLL_					0	0	0		ENST00000332674.9_2_10:112045956-112046085:+|nuORF	ENST00000332674.9_2_10:112045956-112046085:+|nuORF	ENST00000332674.9_2_10:112045956-112046085:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78778076171875	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.81548	1	3125	3125		20.482	0	1	448230			43929	10132	29376	29389	49778	49778					0.11308733942325944
PTVRHIFI	8	Unmodified	_PTVRHIFI_					0	0	0			REV__ENSG00000141527|ENST00000648509|CARD14	REV__ENSG00000141527|ENST00000648509|CARD14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79608154296875	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.85277	1	4820	4820		25.45	1.2474	1	703950	+		43930	19692	29377	29390	49779	49779					0.08446074267976655
PTVRHIFI	8	Unmodified	_PTVRHIFI_					0	0	0			REV__ENSG00000141527|ENST00000648509|CARD14	REV__ENSG00000141527|ENST00000648509|CARD14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.3002014160156	2	491.795269	981.575986	-0.69087	-0.00033977	0.56926	0.00027996	-0.12162	-5.981E-05	491.7958365285056	61.966	0.96044	62.073	61.687	62.647	0.10743					54	43	2	0	0	0	0.91005	1	5391	5391		42.474	1.9018	1	205670	+		43931	19692	29377	29390	49780	49780					0.08446074267976655
PTVSKIFF	8	Unmodified	_PTVSKIFF_					0	0	0			REV__ENST00000466553.1_1_3:42662892-42672698:+|nuORF	REV__ENST00000466553.1_1_3:42662892-42672698:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.3061828613281	2	469.770929	937.527304	-1.2745	-0.00059873	-3.6298	-0.0017052	-4.9044	-0.0023039	469.76889761658543	46.059	0.55751	46.954	46.647	47.205	0.89542					22	13	2	0	0	0	0.4196	1	4357	4357		52.299	18.127	1	317320	+		43932	27134	29378	29391	49781	49781					0.056041609082285504
PTVSKIFF	8	Unmodified	_PTVSKIFF_					0	0	0			REV__ENST00000466553.1_1_3:42662892-42672698:+|nuORF	REV__ENST00000466553.1_1_3:42662892-42672698:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	469.770929	937.527304	-0.89604	-0.00042093	-3.8018	-0.001786	-4.6978	-0.0022069	469.76907599504455	46.175	0.52175	46.646	46.417	46.938	0.47139	-0.15412	-4.6774E-05	NaN	52.299	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	298760	+		43933	27134	29378	29391							0.056041609082285504
PTVSPPMD	8	Unmodified	_PTVSPPMD_					0	0	0			REV__ENSG00000103194|ENST00000219473|USP10	REV__ENSG00000103194|ENST00000219473|USP10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.25433349609375	2	422.199479	842.384405	0.81359	0.0003435	-3.6095	-0.0015239	-2.796	-0.0011804	422.19837040881276	85.614	2.883	85.54	84.02	86.903	-0.073761					133	66	3	0	0	0	0.4196	1	8593	8593		31.955	6.5047	1	182850	+		43934	17394	29379	29392	49782	49782					-0.04309214545310169
PTVVVKEE	8	Unmodified	_PTVVVKEE_					0	0	0		nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C;ENSG00000126012|ENST00000375401|KDM5C;ENST00000497995.1_1_X:53244961-53245340:-|nuORF	nc|ENSG00000126012|P41229-4|KDM5C	nc|ENSG00000126012|P41229-4|KDM5C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.75469970703125	2	450.755475	899.496398	-0.14159	-6.3823E-05	-2.8357	-0.0012782	-2.9773	-0.001342	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.87064	1	7849	7849		29.15	3.5755	1	109620			43935	3437	29380	29393	49783	49783					0.042629628033296285
PTVYILKLE	9	Unmodified	_PTVYILKLE_					0	0	0			REV__ENSG00000004700|ENST00000444129|RECQL	REV__ENSG00000004700|ENST00000444129|RECQL	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.32666015625	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.9	1	117.87	117.37	118.37	-0.02433								0	0	0	0.30416	1	13057	13057		29.15	10.825	1		+		43936	16060	29381	29394	49784	49784					0.09816657313990618
PTWIIKVKKP	10	Unmodified	_PTWIIKVKKP_					0	0	0		ENSG00000157680|ENST00000614521|DGKI;nc|ENSG00000157680|O75912|DGKI	ENSG00000157680|ENST00000614521|DGKI	ENSG00000157680|ENST00000614521|DGKI	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9291687011719	3	403.928781	1208.76451	-1.067	-0.00043099	2.3128	0.0009342	1.2458	0.00050321	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.86151	1	4147	4147		15.333	0.63944	1	5907700			43937	5445	29382	29395	49785	49785					0.1684830712160874
PTWWYTYSR	9	Unmodified	_PTWWYTYSR_					0	0	0			REV__ENSG00000112367|ENST00000230124|FIG4	REV__ENSG00000112367|ENST00000230124|FIG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.295654296875	2	630.29583	1258.57711	0.64029	0.00040357	1.2552	0.00079115	1.8955	0.0011947	630.2965544942194	23.374	0.99222	23.435	23.057	24.05	0.060431					84	35	3	0	0	0	0.7932	1	809	809		24.203	0	1	334210	+		43938	17943	29383	29396	49786	49786					-0.04183756153793183
PTYPVGTTVEF	11	Unmodified	_PTYPVGTTVEF_					0	0	0		nc|ENSG00000063015|Q53EL9-3|SEZ6;ENSG00000063015|ENST00000317338|SEZ6;nc|ENSG00000063015|Q53EL9-2|SEZ6	nc|ENSG00000063015|Q53EL9-3|SEZ6	nc|ENSG00000063015|Q53EL9-3|SEZ6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.8048095703125	2	605.803154	1209.59175	0.5126	0.00031053	1.3039	0.00078993	1.8165	0.0011005	605.8036610360224	56.198	0.83415	56.758	56.395	57.23	0.55954					56	20	4	0	0	0	0.64498	2	5793	5793;5828		39.253	7.4938	1	3028000			43939	1087	29384	29397	49787;49788	49787					-0.004657287962800183
PVACLSFC	8	Unmodified	_PVACLSFC_					0	0	0		nc|ENSG00000042832|P01266-2|TG;ENSG00000042832|ENST00000220616|TG	nc|ENSG00000042832|P01266-2|TG	nc|ENSG00000042832|P01266-2|TG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1914978027344	2	420.193142	838.371732	-0.017504	-7.3551E-06	-4.1267	-0.001734	-4.1442	-0.0017414	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.89457	2	11251	11251;11295		37.028	3.5129	1	4147200			43940	939	29385	29398	49789;49790	49789					-0.05391949209206359
PVAEPTKLVLP	11	Unmodified	_PVAEPTKLVLP_					0	0	0		nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013-4|ARHGEF10;ENSG00000104728|ENST00000349830|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.35302734375	2	582.355357	1162.69616	-0.28407	-0.00016543	-2.8357	-0.0016514	-3.1197	-0.0018168	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.64498	2	10861	10635;10861		39.253	5.0803	1	61091000			43941	2143	29386	29399	49791;49792	49792					0.1213201775105972
PVAEPTKLVLP	11	Unmodified	_PVAEPTKLVLP_					0	0	0		nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013-4|ARHGEF10;ENSG00000104728|ENST00000349830|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.35400390625	2	582.355357	1162.69616	-0.28408	-0.00016544	-2.4923	-0.0014514	-2.7764	-0.0016168	582.3539590095555	107.8	1.0319	107.8	106.84	107.87	0					66	24	3	0	0	0	0.7342	1	11188	11188		25.574	0	1	7275300			43942	2143	29386	29399	49793	49793					0.1213201775105972
PVAEPTKLVLP	11	Unmodified	_PVAEPTKLVLP_					0	0	0		nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013-4|ARHGEF10;ENSG00000104728|ENST00000349830|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533935546875	2	582.355357	1162.69616	0.15817	9.2113E-05	-3.4182	-0.0019906	-3.26	-0.0018985	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.62614	2	11559	11413;11559		41.427	2.4771	1	78004000			43943	2143	29386	29399	49794;49795	49795					0.1213201775105972
PVAEPTKLVLP	11	Unmodified	_PVAEPTKLVLP_					0	0	0		nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013-4|ARHGEF10;ENSG00000104728|ENST00000349830|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3534545898438	2	582.355357	1162.69616	0.72244	0.00042072	-3.9804	-0.002318	-3.258	-0.0018973	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.69931	2	11176	10992;11176		31.634	2.4642	1	132960000			43944	2143	29386	29399	49796;49797	49797					0.1213201775105972
PVAEPTKLVLP	11	Unmodified	_PVAEPTKLVLP_					0	0	0		nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013-4|ARHGEF10;ENSG00000104728|ENST00000349830|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3538208007812	2	582.355357	1162.69616	-1.3468	-0.00078429	-1.8918	-0.0011017	-3.2386	-0.001886	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.73893	1	11063	11063		24.519	0.31644	1	120000000			43945	2143	29386	29399	49798	49798					0.1213201775105972
PVAIEEEF	8	Unmodified	_PVAIEEEF_					0	0	0		nc|ENSG00000231852|P08686-2|CYP21A2;ENSG00000231852|ENST00000644719|CYP21A2	nc|ENSG00000231852|P08686-2|CYP21A2	nc|ENSG00000231852|P08686-2|CYP21A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.2332763671875	2	467.231833	932.449113	-1.0397	-0.00048579	4.273	0.0019965	3.2333	0.0015107	467.23372611150774	69.413	2.1998	69.548	69.082	71.282	0.13522					162	104	3	0	0	0	0.90024	1	6246	6246		39.021	1.8624	1	8546900			43946	8736	29387	29400	49799	49799					-0.019813164676634187
PVAIRCDCG	9	Unmodified	_PVAIRCDCG_					0	0	0		ENSG00000179600|ENST00000621500|GPHB5	ENSG00000179600|ENST00000621500|GPHB5	ENSG00000179600|ENST00000621500|GPHB5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2333984375	2	467.21768	932.420807	0.24405	0.00011402	1.1129	0.00051996	1.3569	0.00063398	467.21896515851193	67.069	0.30554	67.454	67.372	67.677	0.38515					13	8	2	0	0	0	0.20789	1	7333	7333		38.806	13.232	1	167220			43947	7281	29388	29401	49800	49800					-0.048106609202591244
PVAKKAKK	8	Unmodified	_PVAKKAKK_					0	0	0		ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3002624511719	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.86906	1	6478	6478		8.2313	0	1	1072400			43948	6169	29389	29402	49801	49801					0.14627262273359065
PVAKKAKK	8	Unmodified	_PVAKKAKK_					0	0	0		ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3000793457031	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.82419	1	6809	6809		13.775	0	1	1680500			43949	6169	29389	29402	49802	49802					0.14627262273359065
PVAKKAKK	8	Unmodified	_PVAKKAKK_					0	0	0		ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3004150390625	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.82419	1	6968	6968		13.775	0.81615	1	2081500			43950	6169	29389	29402	49803	49803					0.14627262273359065
PVAKKAKK	8	Unmodified	_PVAKKAKK_					0	0	0		ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.300048828125	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.79929	3	6602	6550;6602;6630		18.324	5.1935	1	1819800			43951	6169	29389	29402	49804;49805;49806	49805					0.14627262273359065
PVAKKAKK	8	Unmodified	_PVAKKAKK_					0	0	0		ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.30023193359375	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.83646	1	6715	6715		12.207	0	1	1852500			43952	6169	29389	29402	49807	49807					0.14627262273359065
PVAKKAKK	8	Unmodified	_PVAKKAKK_					0	0	0		ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3018493652344	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.79929	8	8560	7732;7799;7847;7871;7883;8015;8088;8560		19.36	6.4008	1	5485100			43953	6169	29389	29402	49808;49809;49810;49811;49812;49813;49814;49815	49815					0.14627262273359065
PVAKKAKK	8	Unmodified	_PVAKKAKK_					0	0	0		ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	ENSG00000166197|ENST00000605788|NOLC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3002014160156	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.79929	9	8317	7760;7794;7863;7897;7909;7981;8029;8089;8317		20.482	7.5226	1	6323600			43954	6169	29389	29402	49816;49817;49818;49819;49820;49821;49822;49823;49824	49824					0.14627262273359065
PVAKLAIR	8	Unmodified	_PVAKLAIR_					0	0	0		ENST00000591031.6_1_19:19232302-19241151:-|nuORF;ENST00000587406.5_1_19:19232302-19249261:-|nuORF;nc|ENSG00000064545|Q9NX61-2|TMEM161A;ENST00000589448.5_1_19:19230741-19243387:-|nuORF;ENSG00000064545|ENST00000162044|TMEM161A	ENST00000591031.6_1_19:19232302-19241151:-|nuORF	ENST00000591031.6_1_19:19232302-19241151:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.251708984375	2	434.292362	866.570172	-1.5839	-0.00068786	1.7786	0.00077243	0.19472	8.4566E-05	434.2930179568363	77.896	0.88998	78.023	77.749	78.639	0.12695					55	29	2	0	0	0	0.4196	1	7345	7345		26.796	6.3143	1	245780			43955	1104	29390	29403	49825	49825					0.13154975756310705
PVAKLAIR	8	Unmodified	_PVAKLAIR_					0	0	0		ENST00000591031.6_1_19:19232302-19241151:-|nuORF;ENST00000587406.5_1_19:19232302-19249261:-|nuORF;nc|ENSG00000064545|Q9NX61-2|TMEM161A;ENST00000589448.5_1_19:19230741-19243387:-|nuORF;ENSG00000064545|ENST00000162044|TMEM161A	ENST00000591031.6_1_19:19232302-19241151:-|nuORF	ENST00000591031.6_1_19:19232302-19241151:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2513732910156	2	434.292362	866.570172	0.52993	0.00023014	-0.30876	-0.00013409	0.22116	9.605E-05	434.2920967302585	77.83	0.98502	77.966	77.728	78.713	0.13667					60	31	2	0	0	0	0.4196	1	7338	7338		33.516	13.034	1	229590			43956	1104	29390	29403	49826	49826					0.13154975756310705
PVAQLVSH	8	Unmodified	_PVAQLVSH_					0	0	0			REV__ENST00000471789.1_1_9:123594085-123605145:-|nuORF	REV__ENST00000471789.1_1_9:123594085-123605145:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.29498291015625	2	425.742702	849.470852	-1.4443	-0.00061491	0.053111	2.2612E-05	-1.3912	-0.00059229	425.7426973943705	76.26	1.2451	76.349	75.57	76.816	0.089363					93	39	4	0	0	0	0.4196	1	6997	6997		45.952	0	1	206880	+		43957	17056	29391	29404	49827	49827					0.040095330715644195
PVATFLAQL	9	Unmodified	_PVATFLAQL_					0	0	0			REV__ENST00000578759.1_1_17:60214444-60217453:-|nuORF	REV__ENST00000578759.1_1_17:60214444-60217453:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.28082275390625	2	480.28166	958.548768	0.7717	0.00037063	-2.4741	-0.0011882	-1.7024	-0.00081761	480.2803620353023	99.435	0.88804	99.592	99.235	100.12	0.15659					37	20	2	0	0	0	0.78983	1	10359	10359		27.882	0	1	335910	+		43958	29028	29392	29405	49828	49828					0.06783545936934843
PVATFLAQL	9	Unmodified	_PVATFLAQL_					0	0	0			REV__ENST00000578759.1_1_17:60214444-60217453:-|nuORF	REV__ENST00000578759.1_1_17:60214444-60217453:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.2812805175781	2	480.28166	958.548768	-1.6792	-0.00080648	0.10573	5.078E-05	-1.5735	-0.0007557	480.2815170971303	99.526	0.96476	99.712	99.198	100.16	0.18582					47	22	3	0	0	0	0.78536	1	10318	10318		29.15	1.2673	1	356250	+		43959	29028	29392	29405	49829	49829					0.06783545936934843
PVAVAVIVG	9	Unmodified	_PVAVAVIVG_					0	0	0		ENSG00000113594|ENST00000453190|LIFR	ENSG00000113594|ENST00000453190|LIFR	ENSG00000113594|ENST00000453190|LIFR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7669372558594	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.7932	1	2659	2659		14.664	0	1	2097300			43960	2732	29393	29406	49830	49830					0.09792178253815109
PVAVRRPS	8	Unmodified	_PVAVRRPS_					0	0	0			REV__ENSG00000125820|ENST00000377142|NKX2-2	REV__ENSG00000125820|ENST00000377142|NKX2-2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.26165771484375	2	441.269419	880.524284	-0.1543	-6.8089E-05	0.18511	8.1682E-05	0.030803	1.3592E-05	441.2695055661975	103.58	1.0224	103.57	103.22	104.25	-0.0035706					40	24	2	0	0	0	0.87479	1	11137	11137		30.504	6.3009	1	426630	+		43961	18672	29394	29407	49831	49831					0.07924330574087435
PVAVRRPS	8	Unmodified	_PVAVRRPS_					0	0	0			REV__ENSG00000125820|ENST00000377142|NKX2-2	REV__ENSG00000125820|ENST00000377142|NKX2-2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	441.269419	880.524284	-0.1543	-6.8089E-05	0.18511	8.1682E-05	0.030803	1.3592E-05	441.2695055661975	103.58	1.0224	103.57	103.22	104.25	-0.0035706	0.075822	0.00077344	NaN	30.504	40	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	426630	+		43962	18672	29394	29407							0.07924330574087435
PVAVRRPS	8	Unmodified	_PVAVRRPS_					0	0	0			REV__ENSG00000125820|ENST00000377142|NKX2-2	REV__ENSG00000125820|ENST00000377142|NKX2-2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	441.269419	880.524284	2.7333	0.0012061	-2.8186	-0.0012438	-0.085268	-3.7626E-05	441.2681660611083	103.51	0.97604	103.47	103.04	104.01	-0.043755	-0.027433	-0.0018774	NaN	30.504	30	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	394640	+		43963	18672	29394	29407							0.07924330574087435
PVAVRRPS	8	Unmodified	_PVAVRRPS_					0	0	0			REV__ENSG00000125820|ENST00000377142|NKX2-2	REV__ENSG00000125820|ENST00000377142|NKX2-2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	441.269419	880.524284	1.8863	0.00083239	-1.8468	-0.00081495	0.039506	1.7433E-05	441.2685623954987	103.44	1.2977	103.48	102.83	104.13	0.041481	-0.019991	-0.0010198	NaN	30.504	38	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	328930	+		43964	18672	29394	29407							0.07924330574087435
PVAVRRPS	8	Unmodified	_PVAVRRPS_					0	0	0			REV__ENSG00000125820|ENST00000377142|NKX2-2	REV__ENSG00000125820|ENST00000377142|NKX2-2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	441.269419	880.524284	0.74173	0.0003273	-0.81231	-0.00035845	-0.070576	-3.1143E-05	441.269049008726	103.37	0.98591	103.49	103.13	104.12	0.12622	-0.0060184	-0.00010682	NaN	30.504	38	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	618740	+		43965	18672	29394	29407							0.07924330574087435
PVAVRRPS	8	Unmodified	_PVAVRRPS_					0	0	0			REV__ENSG00000125820|ENST00000377142|NKX2-2	REV__ENSG00000125820|ENST00000377142|NKX2-2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	441.269419	880.524284	-1.8033	-0.00079573	1.727	0.00076205	-0.076323	-3.3679E-05	441.27014154377343	103.36	0.97551	103.48	103.11	104.08	0.11495	-0.022379	0.0021342	NaN	30.504	40	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	664470	+		43966	18672	29394	29407							0.07924330574087435
PVDLRLLLL	9	Unmodified	_PVDLRLLLL_					0	0	0		ENST00000392432.6_1_3:194349154-194354092:-|nuORF	ENST00000392432.6_1_3:194349154-194354092:-|nuORF	ENST00000392432.6_1_3:194349154-194354092:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.7802734375	2	526.347335	1050.68012	-0.33513	-0.0001764	-0.43834	-0.00023072	-0.77348	-0.00040712	526.3470717575783	59.914	0.56538	60.305	59.973	60.538	0.39077					24	14	2	0	0	0	0.20789	1	6338	6338		17.365	0	1	375240			43967	11021	29395	29408	49832	49832					0.1568035630484701
PVDLSELK	8	Unmodified	_PVDLSELK_					0	0	0		ENSG00000014138|ENST00000265465|POLA2;ENST00000527850.5_1_11:65029833-65063521:+|nuORF;nc|ENSG00000014138|Q14181-2|POLA2	ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.75537109375	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.89962	1	8345	8345		38.806	4.6336	1	394230			43968	814	29396	29409	49833	49833					0.042629628033296285
PVDPSGCH	8	Unmodified	_PVDPSGCH_					0	0	0		ENST00000398701.2_1_10:75570658-75571450:-|nuORF	ENST00000398701.2_1_10:75570658-75571450:-|nuORF	ENST00000398701.2_1_10:75570658-75571450:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.1760559082031	2	406.173795	810.333038	2.4719	0.001004	1.6254	0.00066021	4.0973	0.0016642	406.17475072554515	96.427	1.6527	96.832	96.34	97.993	0.40498					89	39	4	0	0	0	0.89457	1	11548	11548		37.028	0	1	1443200			43969	11191	29397	29410	49834	49834					-0.07971538519359456
PVEIKVVK	8	Unmodified	_PVEIKVVK_					0	0	0		ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1;ENSG00000179119|ENST00000336349|SPTY2D1;nc|ENSG00000179119|Q68D10-3|SPTY2D1	ENST00000536336.5_1_11:18633859-18655855:-|nuORF	ENST00000536336.5_1_11:18633859-18655855:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3010559082031	2	456.299853	910.585153	-0.95599	-0.00043622	2.965	0.0013529	2.009	0.00091669	456.30107129124815	45.178	1.6921	45.147	44.106	45.798	-0.031067					86	38	3	0	0	0	0.88185	1	3608	3608		32.812	4.9302	1	476180			43970	7246	29398	29411	49835	49835					0.1262842283365444
PVELFVLER	9	Unmodified	_PVELFVLER_					0	0	0			REV__ENST00000523326.1_1_8:27373152-27375585:+|nuORF	REV__ENST00000523326.1_1_8:27373152-27375585:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3062744140625	2	551.318774	1100.623	-1.4479	-0.00079828	-2.2209	-0.0012244	-3.6688	-0.0020227	551.3190655421978	93.287	0.46008	93.479	93.188	93.648	0.19239					12	10	2	0	0	0	0.20789	1	9445	9445		27.882	0	1	33242	+		43971	28137	29399	29412	49836	49836					0.07670889028463534
PVELKIEVV	9	Unmodified	_PVELKIEVV_					0	0	0		nc|ENSG00000183773|Q96NN9-3|AIFM3;ENSG00000183773|ENST00000440238|AIFM3;ENST00000467926.5_1_22:21322139-21327873:+|nuORF	nc|ENSG00000183773|Q96NN9-3|AIFM3	nc|ENSG00000183773|Q96NN9-3|AIFM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3174438476562	2	513.3157	1024.61685	-0.098595	-5.061E-05	1.9716	0.0010121	1.873	0.00096145	513.3165946643301	46.447	0.89642	46.368	46.111	47.007	-0.079002					41	23	2	0	0	0	0.78058	1	3400	3400		30.504	2.6214	1	187700			43972	7559	29400	29413	49837	49837					0.1055237079692688
PVERPPLGE	9	Unmodified	_PVERPPLGE_					0	0	0			REV__nc|ENSG00000131620|Q5XXA6-5|ANO1	REV__nc|ENSG00000131620|Q5XXA6-5|ANO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.211181640625	2	497.271824	992.529095	-1.5117	-0.0007517	-3.5509	-0.0017658	-5.0626	-0.0025175	497.2711424334203	30.204	1.4487	30.233	29.401	30.85	0.02862					49	32	3	0	0	0	0.20789	1	1851	1851		14.865	0	1	71541	+		43973	29843	29401	29414	49838	49838					0.03253169926199462
PVETLGTLL	9	Unmodified	_PVETLGTLL_					0	0	0			REV__ENSG00000033867|ENST00000454389|SLC4A7	REV__ENSG00000033867|ENST00000454389|SLC4A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.7800598144531	2	471.778951	941.543348	0.57127	0.00026951	-0.52977	-0.00024994	0.041494	1.9576E-05	471.7785193324983	82.773	0.8857	82.707	82.281	83.166	-0.066185					44	20	3	0	0	0	0.78058	1	8430	8430		30.504	1.3541	1	313290	+		43974	16283	29402	29415	49839	49839					0.070238223544834
PVEVKLLP	8	Unmodified	_PVEVKLLP_					0	0	0		ENSG00000006530|ENST00000649286|AGK	ENSG00000006530|ENST00000649286|AGK	ENSG00000006530|ENST00000649286|AGK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.787841796875	2	447.786579	893.558604	-1.4062	-0.00062966	4.3321	0.0019399	2.926	0.0013102	447.7883827410388	38.825	1.0154	39.167	38.856	39.872	0.34187					59	23	4	0	0	0	0.85277	1	3218	3218		25.45	0	1	988770			43975	702	29403	29416	49840	49840					0.1075673394233263
PVEVLLIIIA	10	Unmodified	_PVEVLLIIIA_					0	0	0			REV__nc|ENSG00000165125|Q9H1D0-2|TRPV6	REV__nc|ENSG00000165125|Q9H1D0-2|TRPV6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.3590698242188	2	540.357368	1078.70018	0.33888	0.00018312	2.2349	0.0012076	2.5738	0.0013908	540.3583651603944	36.668	1.2319	36.608	36.237	37.469	-0.060333					76	35	3	0	0	0	0.91289	1	2096	2096		7.1934	0	1	376760	+		43976	21152	29404	29417	49841	49841					0.1639810724484505
PVFEELSPVL	10	Unmodified	_PVFEELSPVL_					0	0	0		ENSG00000196943|ENST00000267425|NOP9;nc|ENSG00000196943|Q86U38-2|NOP9	ENSG00000196943|ENST00000267425|NOP9	ENSG00000196943|ENST00000267425|NOP9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.7770385742188	2	565.310615	1128.60668	0.46511	0.00026293	-3.633	-0.0020538	-3.1679	-0.0017909	565.3081896774438	52.777	0.53952	53.391	53.116	53.655	0.61436					21	12	3	0	0	0	0.37624	1	5302	5302		38.806	27.295	1	454780			43977	8117	29405	29418	49842	49842					0.04751763071703863
PVFPIILL	8	Unmodified	_PVFPIILL_					0	0	0			REV__ENST00000551915.5_1_12:83081308-83379891:+|nuORF	REV__ENST00000551915.5_1_12:83081308-83379891:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3013916015625	2	456.301865	910.589176	-0.0072028	-3.2867E-06	-1.3407	-0.00061174	-1.3479	-0.00061503	456.30111078683643	33.43	1.7465	33.433	33.037	34.783	0.0030823					133	41	4	0	0	0	0.84567	1	2049	2049		24.504	0	1	1057300	+		43978	22315	29406	29419	49843	49843					0.13030512327384258
PVFPQRRKPTK	11	Unmodified	_PVFPQRRKPTK_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9435119628906	3	451.941973	1352.80409	-1.2917	-0.0005838	4.2551	0.0019231	2.9633	0.0013393	451.94377054874303	55.311	1.3656	55.375	54.704	56.07	0.063725					141	47	4	0	0	0	0.75121	1	4668	4668		21.78	1.75	1	457030	+		43979	16368	29407	29420	49844	49844					0.1417982712500816
PVFVPDVALIA	11	Unmodified	_PVFVPDVALIA_					0	0	0		ENSG00000144647|ENST00000344697|POMGNT2	ENSG00000144647|ENST00000344697|POMGNT2	ENSG00000144647|ENST00000344697|POMGNT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.8386840820312	2	570.8368	1139.65905	1.4099	0.00080484	2.3531	0.0013433	3.7631	0.0021481	570.8381986387325	50.383	0.69075	51.148	50.854	51.545	0.76494					40	16	3	0	0	0	0.67493	1	4976	4976		35.618	6.4482	1	2916800			43980	4722	29408	29421	49845	49845					0.09480346205350543
PVGEEVEP	8	Unmodified	_PVGEEVEP_					0	0	0			REV__ENSG00000091482|ENST00000379494|SMPX	REV__ENSG00000091482|ENST00000379494|SMPX	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3023986816406	2	428.208358	854.402163	-0.13051	-5.5886E-05	-2.4953	-0.0010685	-2.6258	-0.0011244	428.20756199500033	80.701	0.12485	81.123	81.06	81.185	0.4215					4	2	2	0	0	0	0.4196	1	9273	9273		25.45	8.0852	1	23637	+		43981	17014	29409	29422	49846	49846					-0.03086176018803144
PVGIANLK	8	Unmodified	_PVGIANLK_					0	0	0		nc|ENSG00000206072|Q96P15-2|SERPINB11;ENSG00000206072|ENST00000544088|SERPINB11	nc|ENSG00000206072|Q96P15-2|SERPINB11	nc|ENSG00000206072|Q96P15-2|SERPINB11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.9119873046875	2	406.255446	810.496338	1.1321	0.00045991	2.4363	0.00098975	3.5684	0.0014497	406.2563112856829	36.531	1.1186	36.972	36.745	37.863	0.44043					61	26	3	0	0	0	0.4196	1	3009	3009		35.201	6.9464	1	516300			43982	8552	29410	29423	49847	49847					0.08351007593989834
PVGKRHTG	8	Unmodified	_PVGKRHTG_					0	0	0		nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;nc|ENSG00000107736|Q9H251-6|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.24603271484375	2	426.245944	850.477334	-1.843	-0.00078557	2.1463	0.00091483	0.30326	0.00012926	426.2467741737408	87.495	4.0009	87.665	85.686	89.687	0.16922					180	93	4	0	0	0	0.85277	1	8644	8644		25.45	1.2474	1	3180100			43983	2362	29411	29424	49848	49848					0.0461147102294035
PVGLGAVLILK	11	Unmodified	_PVGLGAVLILK_					0	0	0		ENST00000579695.5_1_17:38077365-38077797:-|nuORF	ENST00000579695.5_1_17:38077365-38077797:-|nuORF	ENST00000579695.5_1_17:38077365-38077797:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.3626708984375	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.9	1	44.896	44.396	45.396	-0.0041618								0	0	0	0.56276	1	3539	3539		14.865	1.0895	1				43984	14090	29412	29425	49849	49849					0.17520929338934366
PVGLQPIRF	9	Unmodified	_PVGLQPIRF_					0	0	0		nc|ENSG00000127328|Q96QF0-8|RAB3IP;nc|ENSG00000127328|Q96QF0-3|RAB3IP;nc|ENSG00000127328|Q96QF0-4|RAB3IP;ENSG00000127328|ENST00000247833|RAB3IP;nc|ENSG00000127328|Q96QF0|RAB3IP	nc|ENSG00000127328|Q96QF0-8|RAB3IP	nc|ENSG00000127328|Q96QF0-8|RAB3IP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8087768554688	2	513.808377	1025.6022	-0.30203	-0.00015519	1.5478	0.00079525	1.2457	0.00064007	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.7932	1	4160	4160		19.36	1.0356	1	861580			43985	3491	29413	29426	49850	49850					0.09042343439477918
PVGLRGLM	8	Unmodified	_PVGLRGLM_					0	0	0		ENSG00000198743|ENST00000381151|SLC5A3;ENSG00000117834|ENST00000438567|SLC5A9;nc|ENSG00000117834|Q2M3M2-3|SLC5A9;nc|ENSG00000117834|Q2M3M2-2|SLC5A9	ENSG00000198743|ENST00000381151|SLC5A3	ENSG00000198743|ENST00000381151|SLC5A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7521667480469	2	421.749473	841.484393	2.261	0.00095358	2.5621	0.0010806	4.8232	0.0020342	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.87276	1	7300	7300		29.842	0	1	532850			43986	8319	29414	29427	49851	49851					0.05731067579165483
PVGRVHRL	8	Unmodified	_PVGRVHRL_					0	0	0		ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000188486|ENST00000530167|H2AX;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;chr12:14774912-14775291|47|17.45|0.95|4.21|+|ENST00000389078|H2AJ,H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12	ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ	nc|ENSG00000246705|Q9BTM1-2|H2AJ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2906494140625	2	467.290685	932.566818	0.090159	4.213E-05	-0.43366	-0.00020264	-0.3435	-0.00016051	467.29038676820915	33.276	0.922	33.445	33.103	34.025	0.16971					54	21	4	0	0	0	0.92176	1	2372	2372		46.766	2.2354	1	2902500			43987	7596;116	29415	29428	49852	49852					0.09783725702311585
PVGTLGLLI	9	Unmodified	_PVGTLGLLI_					0	0	0			REV__ENSG00000142583|ENST00000377424|SLC2A5	REV__ENSG00000142583|ENST00000377424|SLC2A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7878723144531	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.7932	1	2318	2318		18.324	1.8513	1	12467000	+		43988	19743	29416	29429	49853	49853					0.11308733942325944
PVGVALVMAS	10	Unmodified	_PVGVALVMAS_					0	0	0			REV__ENST00000602583.5_1_16:85741146-85741365:-|nuORF	REV__ENST00000602583.5_1_16:85741146-85741365:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28765869140625	2	472.267696	942.520839	0.72448	0.00034215	2.1726	0.001026	2.8971	0.0013682	472.2687720181992	95.089	0.48383	95.252	94.949	95.433	0.16307					27	11	3	0	0	0	0.37624	1	9733	9733		37.159	17.799	1	385350	+		43989	29332	29417	29430	49854	49854					0.04727899685212833
PVGVPWGGG	9	Unmodified	_PVGVPWGGG_					0	0	0			REV__ENST00000585047.5_1_17:38218205-38233770:+|nuORF	REV__ENST00000585047.5_1_17:38218205-38233770:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2367858886719	2	413.216321	824.418088	0.49976	0.00020651	-1.1253	-0.00046498	-0.62552	-0.00025847	413.21517706986776	74.75	0.54517	74.882	74.703	75.248	0.13207					18	15	2	0	0	0	0.20789	1	6970	6970		39.021	15.979	1	42119	+		43990	29009	29418	29431	49855	49855					-0.0011442499123859307
PVHGIHLE	8	Unmodified	_PVHGIHLE_					0	0	0		nc|ENSG00000164244|Q96M27-5|PRRC1;ENSG00000164244|ENST00000296666|PRRC1;nc|ENSG00000164244|Q96M27-3|PRRC1;nc|ENSG00000164244|Q96M27-2|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.2463073730469	2	451.248152	900.481751	-1.2821	-0.00057856	2.6153	0.0011801	1.3331	0.00060157	451.2491871267672	67.547	1.2746	67.683	67.257	68.531	0.13522					88	48	2	0	0	0	0.86791	1	6013	6013		28.254	1.4582	1	186190			43991	5942	29419	29432	49856	49856					0.02752935445857929
PVHKLPGPAP	10	Unmodified	_PVHKLPGPAP_					0	0	0			REV__ENST00000310942.8_1_17:77759703-77759895:+|nuORF	REV__ENST00000310942.8_1_17:77759703-77759895:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.79925537109375	2	506.800552	1011.58655	0.2918	0.00014788	-0.072545	-3.6766E-05	0.21925	0.00011112	506.8005319323782	43.625	1.7295	43.682	42.323	44.053	0.056747					65	45	2	0	0	0	0.85939	1	3033	3033		23.042	0	1	255230	+		43992	24897	29420	29433	49857	49857					0.08122056922411502
PVHLEINKL	9	Unmodified	_PVHLEINKL_					0	0	0		ENST00000299413.6_1_11:35832336-35832669:+|nuORF	ENST00000299413.6_1_11:35832336-35832669:+|nuORF	ENST00000299413.6_1_11:35832336-35832669:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8173828125	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.77244	1	8285	8285		32.812	1.2826	1	1159800			43993	9781	29421	29434	49858	49858					0.09498308748334239
PVHLESPAHEH	11	Unmodified	_PVHLESPAHEH_					0	0	0		CON__Q2KJF1	CON__Q2KJF1	CON__Q2KJF1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.80517578125	2	626.807094	1251.59963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.289	1	30.287	29.787	30.787	-0.0022526								0	0	0	0.56276	1	1326	1326		32.812	2.3088	1			+	43994	614	29422	29435	49859	49859					-0.016101567561463526
PVHLLPLHG	9	Unmodified	_PVHLLPLHG_					0	0	0		ENSG00000213398|ENST00000264005|LCAT	ENSG00000213398|ENST00000264005|LCAT	ENSG00000213398|ENST00000264005|LCAT	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7962341308594	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.55	1	59.644	59.144	60.144	0.094059								0	0	0	0.32542	1	5107	5107		21.702	0.7554	1				43995	8588	29423	29436	49860	49860					0.08446074267988024
PVHQRRRRL	9	Unmodified	_PVHQRRRRL_					0	0	0		chr6:2999359-3006468|37|15.46|0.42|5.19|+|1|None,NQO2|1	chr6:2999359-3006468|37|15.46|0.42|5.19|+|1|None,NQO2|1	chr6:2999359-3006468|37|15.46|0.42|5.19|+|1|None,NQO2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.5877685546875	3	406.586523	1216.73774	2.8188	0.0011461	-0.023538	-9.5703E-06	2.7952	0.0011365	406.58643454203246	24.703	1.6586	24.666	24.201	25.86	-0.037178					110	42	4	0	0	0	0.7932	1	925	925		24.519	1.9395	1	337090			43996	474	29424	29437	49861	49861					0.13804056073649917
PVIAVLTRRLP	11	Unmodified	_PVIAVLTRRLP_					0	0	0		ENSG00000241973|ENST00000255882|PI4KA;ENST00000484220.1_1_22:21119034-21147510:-|nuORF	ENSG00000241973|ENST00000255882|PI4KA	ENSG00000241973|ENST00000255882|PI4KA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2675476074219	3	412.271319	1233.79213	0.75298	0.00031043	4.2533	0.0017535	5.0062	0.0020639	412.2731270253963	38.193	0.98835	38.204	37.946	38.935	0.011173					57	22	3	0	0	0	0.1767	1	2618	2618		13.508	1.5756	1	138660			43997	8798	29425	29438	49862	49862					0.18458210381845674
PVIAVLTRRLP	11	Unmodified	_PVIAVLTRRLP_					0	0	0		ENSG00000241973|ENST00000255882|PI4KA;ENST00000484220.1_1_22:21119034-21147510:-|nuORF	ENSG00000241973|ENST00000255882|PI4KA	ENSG00000241973|ENST00000255882|PI4KA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	412.271319	1233.79213	0.7384	0.00030442	4.6644	0.001923	5.4028	0.0022274	412.2730917953157	37.85	0.72768	38.163	37.98	38.708	0.31312	0.032352	-0.00098363	NaN	13.508	43	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	370430			43998	8798	29425	29438							0.18458210381845674
PVIAVLTRRLP	11	Unmodified	_PVIAVLTRRLP_					0	0	0		ENSG00000241973|ENST00000255882|PI4KA;ENST00000484220.1_1_22:21119034-21147510:-|nuORF	ENSG00000241973|ENST00000255882|PI4KA	ENSG00000241973|ENST00000255882|PI4KA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	412.271319	1233.79213	0.071531	2.949E-05	5.2753	0.0021749	5.3469	0.0022044	412.273481698254	37.703	0.7678	38.189	37.986	38.754	0.48581	0.058587	-0.0002281	NaN	13.508	46	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	362350			43999	8798	29425	29438							0.18458210381845674
PVIESTEAI	9	Unmodified	_PVIESTEAI_					0	0	0		ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR	ENSG00000047410|ENST00000367478|TPR	ENSG00000047410|ENST00000367478|TPR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.7587890625	2	479.758215	957.501877	0.71712	0.00034405	0.16747	8.0343E-05	0.88459	0.00042439	479.75815181939663	76.043	0.78616	76.438	76.077	76.863	0.39507					54	18	4	0	0	0	0.28875	1	8620	8620		65.803	7.9919	1	460820			44000	960	29426	29439	49863	49863					0.02142641595139594
PVIGLITELP	10	Unmodified	_PVIGLITELP_					0	0	0		ENSG00000170881|ENST00000303545|RNF139	ENSG00000170881|ENST00000303545|RNF139	ENSG00000170881|ENST00000303545|RNF139	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3248901367188	2	526.323525	1050.6325	-0.18547	-9.7616E-05	2.5835	0.0013598	2.398	0.0012621	526.3248074069744	59.278	1.5395	59.372	58.359	59.898	0.094059					97	61	2	0	0	0	0.86452	1	5030	5030		30.504	6.3009	1	183600			44001	6621	29427	29440	49864	49864					0.10920657313999982
PVIKIESFV	9	Unmodified	_PVIKIESFV_					0	0	0		nc|ENSG00000107201|O95786-2|RIGI;ENSG00000107201|ENST00000379883|RIGI	nc|ENSG00000107201|O95786-2|RIGI	nc|ENSG00000107201|O95786-2|RIGI	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3145141601562	2	516.310418	1030.60628	3.0984	0.0015997	4.0844	0.0021088	7.1828	0.0037085	516.3124899317548	102.33	1.1091	102.29	101.92	103.03	-0.047005					68	26	3	0	0	0	0.77546	1	11239	11239		31.955	3.7006	1	756390			44002	2335	29428	29441	49865	49865					0.09220388142512093
PVIPARRPGFR	11	Unmodified	_PVIPARRPGFR_					0	0	0		ENSG00000164185|ENST00000296600|ZNF474	ENSG00000164185|ENST00000296600|ZNF474	ENSG00000164185|ENST00000296600|ZNF474	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5932922363281	3	422.591163	1264.75166	-0.18605	-7.8623E-05	3.6305	0.0015342	3.4445	0.0014556	422.59257278124653	58.831	1.5397	58.817	57.968	59.508	-0.013729					80	49	3	0	0	0	0.74771	1	5405	5405		22.562	5.3948	1	107360			44003	5935	29429	29442	49866	49866					0.12987288782073847
PVIPPRIH	8	Unmodified	_PVIPPRIH_					0	0	0		ENSG00000188783|ENST00000343110|PRELP	ENSG00000188783|ENST00000343110|PRELP	ENSG00000188783|ENST00000343110|PRELP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7911071777344	2	464.789987	927.565421	0.090364	4.2E-05	1.2939	0.00060138	1.3842	0.00064338	464.7905453409174	36.857	1.3586	36.797	35.976	37.335	-0.060333					62	38	2	0	0	0	0.82464	1	2095	2095		21.702	0	1	232790			44004	7960	29430	29443	49867	49867					0.09874091613551172
PVISPPILVGT	11	Unmodified	_PVISPPILVGT_					0	0	0			REV__ENSG00000136011|ENST00000388887|STAB2	REV__ENSG00000136011|ENST00000388887|STAB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8402709960938	2	546.8368	1091.65905	1.265	0.00069175	4.2188	0.002307	5.4838	0.0029987	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.70737	1	10972	10972		30.318	1.1682	1	39577000	+		44005	19281	29431	29444	49868	49868					0.11688346205323796
PVISPPILVGT	11	Unmodified	_PVISPPILVGT_					0	0	0			REV__ENSG00000136011|ENST00000388887|STAB2	REV__ENSG00000136011|ENST00000388887|STAB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.8399047851562	2	546.8368	1091.65905	2.1574	0.0011797	3.8395	0.0020996	5.9968	0.0032793	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.66929	2	12330	12330;12339		36.447	9.6506	1	10074000	+		44006	19281	29431	29444	49869;49870	49869					0.11688346205323796
PVISSKIAS	9	Unmodified	_PVISSKIAS_					0	0	0			REV__ENSG00000111817|ENST00000644252|DSE	REV__ENSG00000111817|ENST00000644252|DSE	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.2689514160156	2	451.271293	900.528032	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.552	1	77.676	77.176	78.176	0.12485								0	0	0	0.32469	1	7285	7285		21.96	0	1		+		44007	17898	29432	29445	49871	49871					0.07378955557283007
PVIVGETVVDT	11	Unmodified	_PVIVGETVVDT_					0	0	0			REV__nc|ENSG00000147180|Q9Y462|ZNF711	REV__nc|ENSG00000147180|Q9Y462|ZNF711	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.8115234375	2	564.810979	1127.6074	-0.36349	-0.0002053	0.96296	0.00054389	0.59947	0.00033859	564.8114288520378	45.517	0.52866	45.988	45.725	46.254	0.47139					23	12	2	0	0	0	0.5603	1	4235	4235		47.657	3.5405	1	1401300	+		44008	20060	29433	29446	49872	49872					0.048705577207556416
PVIVPQKKN	9	Unmodified	_PVIVPQKKN_					0	0	0			REV__nc|ENSG00000119844|Q6ULP2-7|AFTPH	REV__nc|ENSG00000119844|Q6ULP2-7|AFTPH	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.8204650878906	2	511.821484	1021.62842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.503	1	78.071	77.571	78.571	0.56836								0	0	0	0.31088	1	8852	8852		26.796	2.5934	1		+		44009	18380	29434	29447	49873	49873					0.11846612610941065
PVIVTVTF	8	Unmodified	_PVIVTVTF_					0	0	0		ENST00000472558.6_1_12:6658018-6658174:-|nuORF	ENST00000472558.6_1_12:6658018-6658174:-|nuORF	ENST00000472558.6_1_12:6658018-6658174:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2633361816406	2	438.265479	874.516405	-1.9277	-0.00084486	-2.8186	-0.0012353	-4.7463	-0.0020801	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.86288	1	2151	2151		26.796	0	1	3507500			44010	12265	29435	29448	49874	49874					0.07412758533951092
PVKAPAAPQAL	11	Unmodified	_PVKAPAAPQAL_					0	0	0			REV__nc|ENSG00000115266|O95996-2|APC2	REV__nc|ENSG00000115266|O95996-2|APC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.81689453125	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.64498	1	8298	8298		39.253	13.803	1	1159800	+		44011	18100	29436	29449	49875	49875					0.09498308748311501
PVKGAKPH	8	Unmodified	_PVKGAKPH_					0	0	0		ENST00000482031.5_1_2:238973007-238991399:+|nuORF;nc|ENSG00000132330|Q96I15-2|SCLY;ENSG00000132330|ENST00000254663|SCLY	ENST00000482031.5_1_2:238973007-238991399:+|nuORF	ENST00000482031.5_1_2:238973007-238991399:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25347900390625	2	417.253237	832.491922	-1.8958	-0.00079101	1.4773	0.0006164	-0.41848	-0.00017461	417.2537348130364	35.472	1.6692	35.503	35.168	36.838	0.031132					80	49	2	0	0	0	0.81548	1	1877	1877		20.482	2.1574	1	197380			44012	3782	29437	29450	49876	49876					0.06897543171089637
PVKGAKPH	8	Unmodified	_PVKGAKPH_					0	0	0		ENST00000482031.5_1_2:238973007-238991399:+|nuORF;nc|ENSG00000132330|Q96I15-2|SCLY;ENSG00000132330|ENST00000254663|SCLY	ENST00000482031.5_1_2:238973007-238991399:+|nuORF	ENST00000482031.5_1_2:238973007-238991399:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.25323486328125	2	417.253237	832.491922	-0.20849	-8.6991E-05	-1.1277	-0.00047055	-1.3362	-0.00055755	417.2527156855551	40.298	1.271	40.25	40.046	41.317	-0.04789					89	47	3	0	0	0	0.80706	1	2612	2612		19.36	1.995	1	609210			44013	3782	29437	29450	49877	49877					0.06897543171089637
PVKGGTKCIKY	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))PVKGGTKCIKY_					1	0	0		ENSG00000010278|ENST00000009180|CD9;ENST00000546073.5_1_12:6309665-6341928:+|nuORF;ENST00000538418.1_1_12:6309665-6334888:+|nuORF	ENSG00000010278|ENST00000009180|CD9	ENSG00000010278|ENST00000009180|CD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.3452758789062	2	618.344466	1234.67438	-0.32375	-0.00020019	2.6984	0.0016685	2.3747	0.0014684	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.60058	1	10313	10313		44.377	10.456	1	926440			44014	764	29438	29451	49878	49878					0.06642889730869683
PVKGRFLTYL	10	Unmodified	_PVKGRFLTYL_					0	0	0			REV__nc|ENSG00000110536|Q8WUK0-2|PTPMT1	REV__nc|ENSG00000110536|Q8WUK0-2|PTPMT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8563842773438	2	597.355691	1192.69683	2.4166	0.0014436	-2.8752	-0.0017175	-0.45857	-0.00027393	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.74274	1	10163	10163		42.396	9.5837	1	8047600	+		44015	17821	29439	29452	49879	49879					0.10818857190793096
PVKIALAR	8	Unmodified	_PVKIALAR_					0	0	0		ENSG00000137574|ENST00000260129|TGS1	ENSG00000137574|ENST00000260129|TGS1	ENSG00000137574|ENST00000260129|TGS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25140380859375	2	434.292362	866.570172	0.19056	8.2757E-05	0.034461	1.4966E-05	0.22502	9.7723E-05	434.2922521796797	80.3	1.1921	80.244	79.521	80.713	-0.056503					74	42	2	0	0	0	0.4196	1	8126	8126		7.1934	0	1	286870			44016	4215	29440	29453	49880	49880					0.13154975756322074
PVKIGLRRVVL	11	Unmodified	_PVKIGLRRVVL_					0	0	0		nc|ENSG00000178297|Q7Z410|TMPRSS9;ENSG00000178297|ENST00000696167|TMPRSS9	nc|ENSG00000178297|Q7Z410|TMPRSS9	nc|ENSG00000178297|Q7Z410|TMPRSS9	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.29022216796875	3	417.28708	1248.83941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.374	1	72.417	71.917	72.917	0.042114								0	0	0	0.56276	1	6961	6961		18.531	8.8849	1				44017	7198	29441	29454	49881	49881					0.22494489652808625
PVKKPKIRRK	10	Unmodified	_PVKKPKIRRK_					0	0	0		ENSG00000137413|ENST00000372977|TAF8;nc|ENSG00000137413|Q7Z7C8-2|TAF8	ENSG00000137413|ENST00000372977|TAF8	ENSG00000137413|ENST00000372977|TAF8	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.286865234375	3	417.290825	1248.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.527	1	71.661	71.161	72.161	0.13356								0	0	0	0.45132	1	6513	6513		6.3209	0	1				44018	4198	29442	29455	49882	49882					0.23617311746966152
PVKLQKQKVQ	10	Unmodified	_PVKLQKQKVQ_					0	0	0		ENSG00000134516|ENST00000520908|DOCK2;ENST00000520836.5_1_5:169174421-169268422:+|nuORF;nc|ENSG00000134516|Q92608-2|DOCK2;ENST00000523351.5_1_5:169188379-169509859:+|nuORF	ENSG00000134516|ENST00000520908|DOCK2	ENSG00000134516|ENST00000520908|DOCK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3800659179688	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.86218	1	2702	2702		32.812	9.7699	1	352020			44019	3939	29443	29456	49883	49883					0.15525931110823876
PVKLRHVDP	9	Unmodified	_PVKLRHVDP_					0	0	0		ENSG00000182223|ENST00000327939|ZAR1	ENSG00000182223|ENST00000327939|ZAR1	ENSG00000182223|ENST00000327939|ZAR1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8245239257812	2	530.816733	1059.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.188	1	81.333	80.833	81.833	0.14513								0	0	0	0.28386	1	7761	7761		37.159	1.9584	1				44020	7436	29444	29457	49884	49884					0.091488443254093
PVKQFVKH	8	Unmodified	_PVKQFVKH_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF;ENST00000468576.1_1_3:62229532-62248574:+|nuORF	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7948913574219	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.223	1	60.21	59.71	60.71	-0.013729								0	0	0	0.30252	1	5561	5561		19.36	0	1				44021	4728	29445	29458	49885	49885					0.08446074267999393
PVKQFVKH	8	Unmodified	_PVKQFVKH_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF;ENST00000468576.1_1_3:62229532-62248574:+|nuORF	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79742431640625	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.959	1	63.959	63.459	64.459	-0.00078583								0	0	0	0.30125	1	5956	5956		20.482	1.1219	1				44022	4728	29445	29458	49886	49886					0.08446074267999393
PVKQFVKH	8	Unmodified	_PVKQFVKH_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF;ENST00000468576.1_1_3:62229532-62248574:+|nuORF	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.795654296875	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.80706	1	4203	4203		19.36	0	1	581270			44023	4728	29445	29458	49887	49887					0.08446074267999393
PVKQFVKH	8	Unmodified	_PVKQFVKH_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF;ENST00000468576.1_1_3:62229532-62248574:+|nuORF	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7964172363281	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.85277	1	4141	4141		25.45	6.0902	1	412030			44024	4728	29445	29458	49888	49888					0.08446074267999393
PVKRRLLPM	9	Unmodified	_PVKRRLLPM_					0	0	0		nc|ENSG00000095397|Q9P202-2|WHRN;ENSG00000095397|ENST00000362057|WHRN	nc|ENSG00000095397|Q9P202-2|WHRN	nc|ENSG00000095397|Q9P202-2|WHRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.3538208007812	2	555.352428	1108.6903	1.5834	0.00087937	0.34035	0.00018901	1.9238	0.0010684	555.3524993853406	100.59	1.0891	100.89	100.45	101.54	0.2999					67	28	3	0	0	0	0.7932	1	12175	12175		17.365	0	1	1093500			44025	1726	29446	29459	49889	49889					0.14030640758414847
PVKTAQKVHR	10	Unmodified	_PVKTAQKVHR_					0	0	0		ENSG00000147251|ENST00000276202|DOCK11	ENSG00000147251|ENST00000276202|DOCK11	ENSG00000147251|ENST00000276202|DOCK11	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3495483398438	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.15	1	119.13	118.63	119.63	-0.024033								0	0	0	0.45132	1	13203	13203		18.262	2.6203	1				44026	4892	29447	29460	49890	49890					0.11863607136797327
PVLALCVISY	10	Unmodified	_PVLALCVISY_					0	0	0		ENSG00000118363|ENST00000263672|SPCS2	ENSG00000118363|ENST00000263672|SPCS2	ENSG00000118363|ENST00000263672|SPCS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.3059692382812	2	539.304278	1076.594	-0.020337	-1.0968E-05	3.3482	0.0018057	3.3279	0.0017947	539.3058512123412	54.971	0.88146	55.378	54.99	55.871	0.40663					45	20	3	0	0	0	0.43769	1	5627	5627		60.972	2.19	1	1054400			44027	3024	29448	29461	49891	49891					0.05877028407826401
PVLCLAQTI	9	Unmodified	_PVLCLAQTI_					0	0	0		ENST00000440716.5_1_19:54871478-54875971:-|nuORF	ENST00000440716.5_1_19:54871478-54875971:-|nuORF	ENST00000440716.5_1_19:54871478-54875971:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2779541015625	2	479.275521	956.536489	0.61468	0.0002946	3.1717	0.0015201	3.7864	0.0018147	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.55097	1	7799	7799		49.442	8.6634	1	1802300			44028	11775	29449	29462	49892	49892					0.05648186202256511
PVLFLKSKA	9	Unmodified	_PVLFLKSKA_					0	0	0			REV__ENST00000477624.1_1_3:48485261-48485342:+|nuORF	REV__ENST00000477624.1_1_3:48485261-48485342:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2904052734375	2	501.820953	1001.62735	-1.5522	-0.00077892	1.7835	0.000895	0.23131	0.00011608	501.82313829159455	86.316	0.25276	86.477	86.353	86.605	0.16174					6	5	2	0	0	0	0.20789	1	8445	8445		10.866	3.6722	1	24754	+		44029	27362	29450	29463	49893	49893					0.12660398242041992
PVLFLPIL	8	Unmodified	_PVLFLPIL_					0	0	0		ENST00000432587.6_1_1:167960544-167962541:+|nuORF	ENST00000432587.6_1_1:167960544-167962541:+|nuORF	ENST00000432587.6_1_1:167960544-167962541:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30108642578125	2	456.301865	910.589176	-1.9367	-0.0008837	0.44582	0.00020343	-1.4908	-0.00068028	456.30190517421295	35.075	2.0362	35.075	34.654	36.69	0					139	52	4	0	0	0	0.85228	1	1941	1941		10.185	0	1	943370			44030	11671	29451	29464	49894	49894					0.13030512327384258
PVLGLHRRAS	10	Unmodified	_PVLGLHRRAS_					0	0	0			REV__ENSG00000133124|ENST00000372129|IRS4	REV__ENSG00000133124|ENST00000372129|IRS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3323974609375	2	553.333082	1104.65161	1.2853	0.00071117	-2.555	-0.0014138	-1.2698	-0.00070261	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.86718	1	10352	10352		27.882	3.6795	1	4524400	+		44031	19062	29452	29465	49895	49895					0.10347051448275124
PVLGTFSGN	9	Unmodified	_PVLGTFSGN_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	446.2318115234375	2	446.232168	890.449782	2.7456	0.0012252	-3.7394	-0.0016687	-0.9938	-0.00044346	446.230433871853	103.85	2.0641	103.81	103.12	105.18	-0.043755					129	49	4	0	0	0	0.72402	1	11380	11380		38.806	8.3025	1	1867400			44032	3201	29453	29466	49896	49896					0.00017522972052574914
PVLGTFSGN	9	Unmodified	_PVLGTFSGN_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	446.232168	890.449782	-1.3093	-0.00058426	0.44032	0.00019648	-0.86901	-0.00038778	446.23230051763215	103.9	2.4419	104.07	103.53	105.97	0.17096	0.11394	0.0016674	NaN	38.806	116	61	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	959210			44033	3201	29453	29466							0.00017522972052574914
PVLGTFSGN	9	Unmodified	_PVLGTFSGN_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	446.232168	890.449782	0.74856	0.00033403	-1.5955	-0.00071197	-0.84694	-0.00037793	446.23137896921486	103.96	1.7012	104.08	103.58	105.28	0.11685	0.12202	-0.00014953	NaN	38.806	100	41	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	921460			44034	3201	29453	29466							0.00017522972052574914
PVLGTFSGN	9	Unmodified	_PVLGTFSGN_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	446.232168	890.449782	-1.7884	-0.00079806	0.94473	0.00042157	-0.84371	-0.00037649	446.2325105709681	103.95	2.6313	104.07	103.69	106.32	0.1129	0.11176	0.0021175	NaN	38.806	114	65	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	844060			44035	3201	29453	29466							0.00017522972052574914
PVLGVLQS	8	Unmodified	_PVLGVLQS_					0	0	0			REV__nc|ENSG00000160282|O95954-3|FTCD	REV__nc|ENSG00000160282|O95954-3|FTCD	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.25726318359375	2	406.747453	811.480354	-1.3668	-0.00055595	4.4695	0.0018179	3.1027	0.001262	406.7493006959264	39.984	1.1066	39.94	39.162	40.269	-0.043694					47	25	2	0	0	0	0.4196	1	2860	2860		27.882	0	1	105950	+		44036	29967	29454	29467	49897	49897					0.06707301357084816
PVLGVLQS	8	Unmodified	_PVLGVLQS_					0	0	0			REV__nc|ENSG00000160282|O95954-3|FTCD	REV__nc|ENSG00000160282|O95954-3|FTCD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2561950683594	2	406.747453	811.480354	0.32943	0.00013399	3.5835	0.0014576	3.9129	0.0015916	406.74876134450767	56.06	0.77882	56.159	55.503	56.282	0.099186					37	29	2	0	0	0	0.4196	1	4668	4668		17.365	13.681	1	89828	+		44037	29967	29454	29467	49898	49898					0.06707301357084816
PVLKYVID	8	Unmodified	_PVLKYVID_					0	0	0			REV__nc|ENSG00000115289|Q9BSM1-3|PCGF1;REV__ENST00000430644.5_1_4:728709-759864:+|nuORF	REV__nc|ENSG00000115289|Q9BSM1-3|PCGF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.78302001953125	2	473.784036	945.553519	-0.30014	-0.0001422	-2.0846	-0.00098766	-2.3848	-0.0011299	473.7828602657225	21.786	0.75253	21.722	21.433	22.185	-0.063837					49	24	3	0	0	0	0.86288	1	675	675		26.796	2.5934	1	95857	+		44038	18105;22779	29455	29468	49899	49899					0.07856430079709753
PVLLRLGKRLL	11	Unmodified	_PVLLRLGKRLL_					0	0	0		ENST00000429770.5_2_3:50402382-50403264:-|nuORF;ENST00000483620.1_1_3:50402099-50403170:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.630859375	3	426.630847	1276.87071	0.26623	0.00011358	-0.21445	-9.1493E-05	0.051778	2.209E-05	426.63069253685165	82.218	1.0571	82.692	82.278	83.335	0.47383					49	25	2	0	0	0	0.80813	1	9536	9536		9.6461	3.3253	1	1701000			44039	11615	29456	29469	49900	49900					0.24335062686941455
PVLLRLGKRLL	11	Unmodified	_PVLLRLGKRLL_					0	0	0		ENST00000429770.5_2_3:50402382-50403264:-|nuORF;ENST00000483620.1_1_3:50402099-50403170:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	426.630847	1276.87071	0.573	0.00024446	-0.35182	-0.0001501	0.22118	9.4362E-05	426.63056984467477	82.862	0.93968	83.008	82.673	83.613	0.14694	0.12526	-0.00084709	NaN	9.6461	40	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	182140			44040	11615	29456	29469							0.24335062686941455
PVLLRLGKRLL	11	Unmodified	_PVLLRLGKRLL_					0	0	0		ENST00000429770.5_2_3:50402382-50403264:-|nuORF;ENST00000483620.1_1_3:50402099-50403170:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	426.630847	1276.87071	-1.6774	-0.00071564	1.9791	0.00084434	0.30168	0.0001287	426.6316832982354	82.824	1.2328	82.95	82.193	83.426	0.12601	0.06703	0.0021362	NaN	9.6461	42	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	192730			44041	11615	29456	29469							0.24335062686941455
PVLLSVVDHF	10	Unmodified	_PVLLSVVDHF_					0	0	0		ENST00000422197.2_1_1:51837944-51838202:+|nuORF	ENST00000422197.2_1_1:51837944-51838202:+|nuORF	ENST00000422197.2_1_1:51837944-51838202:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.3215942382812	2	563.318774	1124.623	-1.0735	-0.0006047	-2.958	-0.0016663	-4.0315	-0.002271	563.8174777116847	55.775	1.0022	55.775	55.238	56.24	0					49	27	4	0	0	0	0.85939	1	4766	4766		23.042	0	1	74923			44042	11477	29457	29470	49901	49901					0.06566889028476908
PVLNKELF	8	Unmodified	_PVLNKELF_					0	0	0			REV__ENST00000538923.1_1_11:94225978-94226920:-|nuORF	REV__ENST00000538923.1_1_11:94225978-94226920:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2812805175781	2	480.28166	958.548768	1.0992	0.00052791	-2.6116	-0.0012543	-1.5124	-0.00072638	480.2802815297023	99.288	1.3371	99.651	99.251	100.59	0.36292					88	33	4	0	0	0	0.92457	1	12036	12036		47.916	0	1	8963900	+		44043	25039	29458	29471	49902	49902					0.06783545936946211
PVLNQLQR	8	Unmodified	_PVLNQLQR_					0	0	0		ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C;nc|ENSG00000171988|Q15652-2|JMJD1C	ENSG00000171988|ENST00000399262|JMJD1C	ENSG00000171988|ENST00000399262|JMJD1C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.7182312011719	2	484.287808	966.561064	-0.73167	-0.00035434	-1.6089	-0.00077918	-2.3406	-0.0011335	484.2873046300145	100.39	0.22018	100.61	100.51	100.73	0.21511					6	4	2	0	0	0	0.4196	1	10473	10473		26.796	13.837	1	41990			44044	6731	29459	29472	49903	49903					0.07644582399996125
PVLPELPTRL	10	Unmodified	_PVLPELPTRL_					0	0	0		ENST00000449259.1_1_2:65131502-65132238:-|nuORF	ENST00000449259.1_1_2:65131502-65132238:-|nuORF	ENST00000449259.1_1_2:65131502-65132238:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3294677734375	2	567.847699	1133.68084	0.80073	0.00045469	3.8607	0.0021923	4.6615	0.002647	567.8509804514111	93.248	0.36993	93.409	93.162	93.532	0.16119					11	8	2	0	0	0	0.37624	1	9464	9464		31.53	0	1	51549			44045	11872	29460	29473	49904	49904					0.11935150953877383
PVLRGGGR	8	Unmodified	_PVLRGGGR_					0	0	0		ENST00000543732.1_1_11:60692691-60692868:+|nuORF	ENST00000543732.1_1_11:60692691-60692868:+|nuORF	ENST00000543732.1_1_11:60692691-60692868:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2483215332031	2	406.248486	810.48242	3.1449	0.0012776	-2.7889	-0.001133	0.35606	0.00014465	406.24727030482205	114.56	0.97545	114.57	114.14	115.12	0.0094528					67	46	2	0	0	0	0.81724	1	13833	13833		14.664	0.88877	1	78189			44046	13559	29461	29474	49905	49905					0.06959774885569914
PVLRGQNPGKK	11	Unmodified	_PVLRGQNPGKK_					0	0	0			REV__ENSG00000187325|ENST00000341864|TAF9B	REV__ENSG00000187325|ENST00000341864|TAF9B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3587036132812	2	597.359296	1192.70404	1.8735	0.0011192	-4.3524	-0.0025999	-2.4788	-0.0014808	597.3562887169959	99.941	2.3701	100.27	99.147	101.52	0.33294					172	60	4	0	0	0	0.76322	1	12085	12085		19.104	0.84144	1	4830100	+		44047	22912	29462	29475	49906	49906					0.11539589791209437
PVLRHLVWN	9	Unmodified	_PVLRHLVWN_					0	0	0		ENST00000449470.6_3_4:39460055-39460463:-|nuORF	ENST00000449470.6_3_4:39460055-39460463:-|nuORF	ENST00000449470.6_3_4:39460055-39460463:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3302001953125	2	567.33255	1132.65055	-1.3957	-0.00079181	-3.1453	-0.0017844	-4.5409	-0.0025762	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.78058	1	8891	8891		30.504	2.4222	1	5956400			44048	11875	29463	29476	49907	49907					0.08952837079368692
PVLSKVPGY	9	Unmodified	_PVLSKVPGY_					0	0	0		ENSG00000273559|ENST00000614790|CWC25	ENSG00000273559|ENST00000614790|CWC25	ENSG00000273559|ENST00000614790|CWC25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.28021240234375	2	480.28166	958.548768	-0.095811	-4.6016E-05	-1.6785	-0.00080616	-1.7743	-0.00085217	480.2805963433813	99.968	1.0838	100.01	99.629	100.71	0.0411					35	24	2	0	0	0	0.78058	1	10630	10630		30.504	0.6621	1	201920			44049	8987	29464	29477	49908	49908					0.06783545936946211
PVLSLYFFGC	10	Unmodified	_PVLSLYFFGC_					0	0	0		ENST00000446382.2_1_9:6834760-6835018:+|nuORF	ENST00000446382.2_1_9:6834760-6835018:+|nuORF	ENST00000446382.2_1_9:6834760-6835018:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.8162841796875	2	573.288628	1144.5627	-0.61677	-0.00035359	-2.5348	-0.0014532	-3.1516	-0.0018068	573.2867649580656	36.234	0.54297	36.178	35.925	36.468	-0.055904					26	11	3	0	0	0	0.37624	1	2386	2386		45.952	15.634	1	116020			44050	11835	29465	29478	49909	49909					-0.003795446262756741
PVLTFRAI	8	Unmodified	_PVLTFRAI_					0	0	0			REV__ENST00000427658.1_1_16:90057264-90060229:+|nuORF	REV__ENST00000427658.1_1_16:90057264-90060229:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.78509521484375	2	458.78437	915.554188	-0.22076	-0.00010128	0.36852	0.00016907	0.14776	6.7792E-05	458.78431341419895	55.03	0.9222	55.431	55.027	55.949	0.40101					48	21	3	0	0	0	0.92973	1	5630	5630		50.025	0	1	557910	+		44051	26464	29466	29479	49910	49910					0.09303269519409696
PVLTSLDVP	9	Unmodified	_PVLTSLDVP_					0	0	0		nc|ENSG00000172828|Q6UWW8-2|CES3;ENSG00000172828|ENST00000303334|CES3	nc|ENSG00000172828|Q6UWW8-2|CES3	nc|ENSG00000172828|Q6UWW8-2|CES3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7692565917969	2	470.771126	939.527698	-1.0221	-0.00048115	-3.257	-0.0015333	-4.2791	-0.0020145	470.76946116999153	50.688	1.1627	50.718	50.343	51.506	0.029629					82	35	3	0	0	0	0.77546	1	4083	4083		31.955	2.8053	1	1717600			44052	6798	29467	29480	49911	49911					0.0555153583743504
PVLTWSPLCI	10	Unmodified	_PVLTWSPLCI_					0	0	0		ENST00000573126.1_1_17:5329517-5329772:+|nuORF	ENST00000573126.1_1_17:5329517-5329772:+|nuORF	ENST00000573126.1_1_17:5329517-5329772:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	564.8114013671875	2	564.809728	1127.6049	0.3799	0.00021457	2.7594	0.0015585	3.1393	0.0017731	564.8113814777386	46.862	0.53256	46.9	46.654	47.186	0.038181					22	13	2	0	0	0	0.86452	1	3473	3473		30.504	1.3541	1	295160			44053	14017	29468	29481	49912	49912					0.046204307820971735
PVLVRLKA	8	Unmodified	_PVLVRLKA_					0	0	0			REV__ENST00000608236.1_1_1:153950428-153950677:+|nuORF	REV__ENST00000608236.1_1_1:153950428-153950677:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.30780029296875	2	448.308013	894.601472	-0.58085	-0.0002604	0.87174	0.00039081	0.29088	0.00013041	448.3082265393825	78.118	0.74159	78.523	78.182	78.924	0.4053					36	17	3	0	0	0	0.80706	1	8933	8933		19.36	4.6959	1	343680	+		44054	29395	29469	29482	49913	49913					0.1499554879039806
PVLVRLKA	8	Unmodified	_PVLVRLKA_					0	0	0			REV__ENST00000608236.1_1_1:153950428-153950677:+|nuORF	REV__ENST00000608236.1_1_1:153950428-153950677:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	448.308013	894.601472	-0.0017418	-7.8087E-07	0.15802	7.0841E-05	0.15628	7.0061E-05	448.3079324044305	78	0.90268	78.564	78.134	79.037	0.56332	0.020418	-0.00031417	NaN	19.36	32	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299620	+		44055	29395	29469	29482							0.1499554879039806
PVLVTITTYSE	11	Unmodified	_PVLVTITTYSE_					0	0	0			REV__nc|ENSG00000182985|Q9BY67-2|CADM1	REV__nc|ENSG00000182985|Q9BY67-2|CADM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3499145507812	2	611.831911	1221.64927	2.637	0.0016134	4.0084	0.0024525	6.6454	0.0040659	611.8341832462049	98.306	1.8493	98.251	97.188	99.037	-0.054817					60	42	2	0	0	0	0.17318	1	10466	10466		19.104	0.84144	1	56190	+		44056	22565	29470	29483	49914	49914					0.04731113409275167
PVLVTITTYSE	11	Unmodified	_PVLVTITTYSE_					0	0	0			REV__nc|ENSG00000182985|Q9BY67-2|CADM1	REV__nc|ENSG00000182985|Q9BY67-2|CADM1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	611.831911	1221.64927	0.23119	0.00014145	5.8603	0.0035855	6.0915	0.0037269	611.8354937481403	98.126	1.4369	98.174	97.373	98.81	0.048164	0.013513	0.00094243	NaN	19.104	57	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51235	+		44057	22565	29470	29483							0.04731113409275167
PVLVTITTYSE	11	Unmodified	_PVLVTITTYSE_					0	0	0			REV__nc|ENSG00000182985|Q9BY67-2|CADM1	REV__nc|ENSG00000182985|Q9BY67-2|CADM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	611.831911	1221.64927	1.1508	0.0007041	4.9617	0.0030357	6.1125	0.0037398	611.8348465796059	98.177	1.7259	98.405	97.327	99.053	0.22787	0.24493	-0.00015711	NaN	19.104	48	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45134	+		44058	22565	29470	29483							0.04731113409275167
PVLVTITTYSE	11	Unmodified	_PVLVTITTYSE_					0	0	0			REV__nc|ENSG00000182985|Q9BY67-2|CADM1	REV__nc|ENSG00000182985|Q9BY67-2|CADM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	611.831911	1221.64927	0.88627	0.00054225	5.0409	0.0030842	5.9272	0.0036264	611.8350428341538	97.804	1.5285	97.965	97.379	98.908	0.16073	-0.19509	-6.0164E-05	NaN	19.104	53	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43758	+		44059	22565	29470	29483							0.04731113409275167
PVLVTITTYSE	11	Unmodified	_PVLVTITTYSE_					0	0	0			REV__nc|ENSG00000182985|Q9BY67-2|CADM1	REV__nc|ENSG00000182985|Q9BY67-2|CADM1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	611.831911	1221.64927	1.3745	0.00084098	1.4354	0.00087821	2.8099	0.0017192	612.3326952361239	97.441	0.97959	97.832	97.157	98.137	0.39065	-0.32849	-0.0044721	NaN	19.104	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144730	+		44060	22565	29470	29483							0.04731113409275167
PVLVVKGR	8	Unmodified	_PVLVVKGR_					0	0	0			REV__ENST00000381475.3_1:147851207-147931919:-|nuORF	REV__ENST00000381475.3_1:147851207-147931919:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2513732910156	2	434.292362	866.570172	-0.16786	-7.2901E-05	0.58104	0.00025234	0.41318	0.00017944	434.29247929457296	80.107	1.2859	80.169	79.591	80.877	0.062233					85	42	3	0	0	0	0.4196	1	7793	7793		12.959	0.75233	1	238130	+		44061	25966	29471	29484	49915	49915					0.13154975756322074
PVLVVKGR	8	Unmodified	_PVLVVKGR_					0	0	0			REV__ENST00000381475.3_1:147851207-147931919:-|nuORF	REV__ENST00000381475.3_1:147851207-147931919:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2516174316406	2	434.292362	866.570172	-1.5797	-0.00068604	2.0132	0.00087433	0.43355	0.00018829	434.2930687205942	79.951	1.0809	80.085	79.537	80.618	0.13405					72	37	3	0	0	0	0.4196	1	7631	7631		18.324	5.3652	1	324350	+		44062	25966	29471	29484	49916	49916					0.13154975756322074
PVLVVKGR	8	Unmodified	_PVLVVKGR_					0	0	0			REV__ENST00000381475.3_1:147851207-147931919:-|nuORF	REV__ENST00000381475.3_1:147851207-147931919:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25152587890625	2	434.292362	866.570172	-1.5759	-0.00068438	2.1069	0.000915	0.53103	0.00023062	434.29330042551294	80.85	0.48317	80.955	80.75	81.233	0.10526					17	11	2	0	0	0	0.4196	1	7662	7662		12.207	8.5225	1	40293	+		44063	25966	29471	29484	49917	49917					0.13154975756322074
PVLVVKGR	8	Unmodified	_PVLVVKGR_					0	0	0			REV__ENST00000381475.3_1:147851207-147931919:-|nuORF	REV__ENST00000381475.3_1:147851207-147931919:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2516174316406	2	434.292362	866.570172	0.23659	0.00010275	0.025266	1.0973E-05	0.26186	0.00011372	434.2922052023286	79.125	1.2754	79.675	79.023	80.298	0.54945					60	29	3	0	0	0	0.4196	1	9130	9130		24.203	3.7209	1	1003500	+		44064	25966	29471	29484	49918	49918					0.13154975756322074
PVLYIINR	8	Unmodified	_PVLYIINR_					0	0	0		ENST00000294543.10_2_1:20124682-20126384:-|nuORF	ENST00000294543.10_2_1:20124682-20126384:-|nuORF	ENST00000294543.10_2_1:20124682-20126384:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3001708984375	2	494.302927	986.591301	-0.91928	-0.0004544	-2.9718	-0.001469	-3.8911	-0.0019234	494.3012643148675	17.165	0.6396	17.083	16.921	17.561	-0.0821					42	27	2	0	0	0	0.80127	1	206	206		16.705	1.0687	1	31671			44065	9706	29472	29485	49919	49919					0.09746941065179726
PVMELAKAL	9	Unmodified	_PVMELAKAL_					0	0	0			REV__ENSG00000184445|ENST00000333479|KNTC1	REV__ENSG00000184445|ENST00000333479|KNTC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.28515625	2	486.283346	970.552139	0.3876	0.00018848	-2.7572	-0.0013408	-2.3696	-0.0011523	486.2820323665379	56.853	0.46798	57.408	57.092	57.56	0.55512					14	10	2	0	0	0	0.20789	1	5900	5900		37.159	15.199	1	399460	+		44066	22677	29473	29486	49920	49920					0.06568472719300189
PVMLSVPRVRR	11	Unmodified	_PVMLSVPRVRR_					0	0	0			REV__nc|ENSG00000151067|Q13936-17|CACNA1C	REV__nc|ENSG00000151067|Q13936-17|CACNA1C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.60247802734375	3	437.267691	1308.78124	-0.040503	-1.7711E-05	0.41737	0.0001825	0.37687	0.00016479	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.72374	2	4353	4314;4353		27.644	7.6134	1	2735300	+		44067	29929	29474	29487	49921;49922	49922					0.13920484735899663
PVMLSVPRVRR	11	Unmodified	_PVMLSVPRVRR_					0	0	0			REV__nc|ENSG00000151067|Q13936-17|CACNA1C	REV__nc|ENSG00000151067|Q13936-17|CACNA1C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2679138183594	3	437.267691	1308.78124	-1.575	-0.00068869	2.0109	0.00087928	0.43587	0.00019059	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.72374	1	3999	3999		27.644	1.5805	1	3429700	+		44068	29929	29474	29487	49923	49923					0.13920484735899663
PVMNNDKH	8	Unmodified	_PVMNNDKH_					0	0	0		ENSG00000100271|ENST00000266254|TTLL1	ENSG00000100271|ENST00000266254|TTLL1	ENSG00000100271|ENST00000266254|TTLL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.7285461425781	2	477.726726	953.4389	1.9069	0.00091096	1.4734	0.00070387	3.3802	0.0016148	477.7275390599482	95.725	1.691	96.145	95.664	97.355	0.42051					104	40	5	0	0	0	0.9283	1	11476	11476		49.442	12.282	1	6957300			44069	1816	29475	29488	49924	49924					-0.039682026738887544
PVMNPLIYSL	10	Unmodified	_PVMNPLIYSL_					0	0	0		nc|ENSG00000203581|Q96R84|OR1F2P	nc|ENSG00000203581|Q96R84|OR1F2P	nc|ENSG00000203581|Q96R84|OR1F2P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	573.817138671875	2	573.81501	1145.61547	0.47187	0.00027077	2.9596	0.0016983	3.4315	0.001969	573.8166375827257	36.087	1.0388	36.026	35.489	36.528	-0.060337					75	29	4	0	0	0	0.77314	1	1981	1981		40.778	5.1599	1	912290			44070	15202	29476	29489	49925	49925					0.04848413436548071
PVNGMLLGL	9	Unmodified	_PVNGMLLGL_					0	0	0			REV__ENST00000222812.7_1_7:73113575-73114067:-|nuORF	REV__ENST00000222812.7_1_7:73113575-73114067:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2641296386719	2	457.262413	912.510274	0.52869	0.00024175	3.5661	0.0016306	4.0948	0.0018724	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.76996	1	8414	8414		33.516	3.674	1	4885100	+		44071	24167	29477	29490	49926	49926					0.05051917030777986
PVNLPGTNLRK	11	Unmodified	_PVNLPGTNLRK_					0	0	0		ENSG00000125848|ENST00000341420|FLRT3	ENSG00000125848|ENST00000341420|FLRT3	ENSG00000125848|ENST00000341420|FLRT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8587036132812	2	604.859129	1207.70371	0.044967	2.7199E-05	-0.8945	-0.00054104	-0.84953	-0.00051385	604.8584867584212	80.792	1.0733	81.319	80.907	81.98	0.52676					69	21	4	0	0	0	0.6593	1	9352	9352		21.686	0	1	4362400			44072	3421	29478	29491	49927	49927					0.10816170071348097
PVNQSSSFVL	10	Unmodified	_PVNQSSSFVL_					0	0	0		ENST00000460849.5_1_3:55640917-55717870:-|nuORF	ENST00000460849.5_1_3:55640917-55717870:-|nuORF	ENST00000460849.5_1_3:55640917-55717870:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.2792358398438	2	539.282389	1076.55022	-0.025946	-1.3992E-05	-1.3086	-0.0007057	-1.3345	-0.00071969	539.2814842127906	41.019	0.63779	41.023	40.753	41.391	0.0043983					55	23	3	0	0	0	0.85934	1	2627	2627		35.618	1.6967	1	583750			44073	12014	29479	29492	49928	49928					0.01501135235048423
PVNRLRTG	8	Unmodified	_PVNRLRTG_					0	0	0			REV__nc|ENSG00000066455|Q8TBA6-2|GOLGA5	REV__nc|ENSG00000066455|Q8TBA6-2|GOLGA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7722473144531	2	456.772326	911.530098	-0.13169	-6.0151E-05	0.064063	2.9262E-05	-0.067625	-3.0889E-05	456.7722620961799	90.094	1.9861	90.163	89.17	91.156	0.068703					88	46	4	0	0	0	0.86791	1	9222	9222		28.254	1.4582	1	947820	+		44074	16524	29480	29493	49929	49929					0.07079429085763422
PVNRLRTG	8	Unmodified	_PVNRLRTG_					0	0	0			REV__nc|ENSG00000066455|Q8TBA6-2|GOLGA5	REV__nc|ENSG00000066455|Q8TBA6-2|GOLGA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.77276611328125	2	456.772326	911.530098	-1.7558	-0.00080201	2.154	0.00098388	0.39816	0.00018187	456.7729586253597	89.816	2.3334	89.992	88.581	90.914	0.1758					104	54	4	0	0	0	0.86791	1	8977	8977		28.254	1.4582	1	808890	+		44075	16524	29480	29493	49930	49930					0.07079429085763422
PVNVIKTLH	9	Unmodified	_PVNVIKTLH_					0	0	0		ENST00000609887.1_1_X:46404949-46406924:+|nuORF	ENST00000609887.1_1_X:46404949-46406924:+|nuORF	ENST00000609887.1_1_X:46404949-46406924:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.81329345703125	2	510.813659	1019.61277	-0.053582	-2.7371E-05	1.033	0.00052767	0.97942	0.0005003	510.81277149178777	80.826	1.111	81.247	80.721	81.832	0.4215					79	26	4	0	0	0	0.72402	1	9292	9292		38.806	3.6054	1	1491100			44076	14491	29481	29494	49931	49931					0.10374326093915442
PVPAVEPV	8	Unmodified	_PVPAVEPV_					0	0	0		nc|ENSG00000290618|P0DPF6|CDRT15P3	nc|ENSG00000290618|P0DPF6|CDRT15P3	nc|ENSG00000290618|P0DPF6|CDRT15P3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.23138427734375	2	404.234179	806.453805	-0.18723	-7.5686E-05	-2.7376	-0.0011067	-2.9249	-0.0011823	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.87276	1	8442	8442		29.842	3.0454	1	4185000			44077	15339	29482	29495	49932	49932					0.04283612465758324
PVPCRGLLPLL	11	Unmodified	_PVPCRGLLPLL_					0	0	0		ENST00000426216.6_1_18:77105468-77105775:+|nuORF	ENST00000426216.6_1_18:77105468-77105775:+|nuORF	ENST00000426216.6_1_18:77105468-77105775:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3431396484375	2	589.359919	1176.70529	-0.40358	-0.00023786	0.18497	0.00010902	-0.21861	-0.00012884	589.3600927470569	92.482	0.17277	92.482	92.33	92.503	0					5	3	2	0	0	0	0.17359	1	9085	9085		26.693	0	1	19190			44078	11548	29483	29496	49933	49933					0.12400087835771956
PVPCSLHI	8	Unmodified	_PVPCSLHI_					0	0	0			REV__ENST00000262544.6_1_20:18488366-18488540:+|nuORF	REV__ENST00000262544.6_1_20:18488366-18488540:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.25543212890625	2	433.233656	864.452759	-0.16838	-7.2946E-05	-1.7492	-0.00075779	-1.9175	-0.00083074	433.233020194346	107.38	0.709	107.35	106.99	107.7	-0.034409					29	16	3	0	0	0	0.4196	1	11703	11703		29.842	8.1392	1	244150	+		44079	24425	29484	29497	49934	49934					0.015110748252027406
PVPELLTG	8	Unmodified	_PVPELLTG_					0	0	0		ENSG00000166987|ENST00000355673|MBD6	ENSG00000166987|ENST00000355673|MBD6	ENSG00000166987|ENST00000355673|MBD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2384338378906	2	413.239461	824.46437	0.89927	0.00037161	-3.9864	-0.0016473	-3.0871	-0.0012757	413.23775271826133	77.246	5.6199	77.651	75.794	81.414	0.40531					207	140	2	0	0	0	0.88915	1	8666	8666		35.201	7.3185	1	1083000			44080	6258	29485	29498	49935	49935					0.045115951201864846
PVPFPGHA	8	Unmodified	_PVPFPGHA_					0	0	0		ENST00000419457.1_1_13:29297857-29298106:-|nuORF	ENST00000419457.1_1_13:29297857-29298106:-|nuORF	ENST00000419457.1_1_13:29297857-29298106:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	411.21820068359375	2	411.218863	820.423173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.346	1	87.346	86.846	87.846	0								0	0	0	0.2945	1	8361	8361		33.493	0	1				44081	11439	29486	29499	49936	49936					0.005778788713769245
PVPGILLT	8	Unmodified	_PVPGILLT_					0	0	0		nc|ENSG00000185664|P40967-5|PMEL;nc|ENSG00000185664|P40967-2|PMEL	nc|ENSG00000185664|P40967-5|PMEL	nc|ENSG00000185664|P40967-5|PMEL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.8977355957031	2	405.260197	808.50584	1.5145	0.00061375	2.5495	0.0010332	4.0639	0.0016469	405.2619906553355	63.025	0.21426	63.053	62.944	63.158	0.02813					13	9	2	0	0	0	0.4196	1	5901	5901		7.6903	0	1	30631			44082	15153	29487	29500	49937	49937					0.09392775879518922
PVPGRHPV	8	Unmodified	_PVPGRHPV_					0	0	0		ENST00000289672.6_1_7:47853565-47855013:-|nuORF;SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|17|2|sense	ENST00000289672.6_1_7:47853565-47855013:-|nuORF	ENST00000289672.6_1_7:47853565-47855013:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7489013671875	2	429.750862	857.487171	-2.154	-0.00092569	-0.54032	-0.0002322	-2.6943	-0.0011579	429.75051038702645	40.625	2.1327	41.017	40.832	42.965	0.39209					111	57	2	0	0	0	0.90024	1	3536	3536		39.021	0	1	10174000			44083	9669	29488	29501	49938	49938					0.052726590283214136
PVPIAPLT	8	Unmodified	_PVPIAPLT_					0	0	0			REV__ENSG00000171956|ENST00000396057|FOXB1	REV__ENSG00000171956|ENST00000396057|FOXB1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.92950439453125	2	404.252372	806.49019	0.0102	4.1234E-06	0.5386	0.00021773	0.5488	0.00022185	404.254256316243	48.205	0.6908	48.197	48.087	48.778	-0.0086823					23	15	3	0	0	0	0.4196	1	3992	3992		28.254	1.4582	1	39501	+		44084	21791	29489	29502	49939	49939					0.07920489362459193
PVPIAPLT	8	Unmodified	_PVPIAPLT_					0	0	0			REV__ENSG00000171956|ENST00000396057|FOXB1	REV__ENSG00000171956|ENST00000396057|FOXB1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	404.252372	806.49019	-1.7637	-0.00071299	6.2813	0.0025392	4.5176	0.0018262	404.2546682439836	48.118	0.22187	48.118	47.982	48.204	0	-0.03946	0.0019975	NaN	28.254	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34072	+		44085	21791	29489	29502							0.07920489362459193
PVPIKKKQS	9	Unmodified	_PVPIKKKQS_					0	0	0		nc|ENSG00000293487|P0DO92|CDIPTOSP;ENST00000565014.5_2_16:29874917-29876497:+|nuORF	nc|ENSG00000293487|P0DO92|CDIPTOSP	nc|ENSG00000293487|P0DO92|CDIPTOSP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.7686767578125	2	512.829309	1023.64407	0.63667	0.0003265	-0.69865	-0.00035829	-0.061984	-3.1787E-05	512.8284374703271	48.84	0.43937	49.744	49.489	49.929	0.90424					12	10	2	0	0	0	0.20789	1	4721	4721		12.207	0	1	174250			44086	13903	29490	29503	49940	49940					0.13318899127989425
PVPKLKEVRW	10	Unmodified	_PVPKLKEVRW_					0	0	0			REV__nc|ENSG00000042493|P40121-2|CAPG	REV__nc|ENSG00000042493|P40121-2|CAPG	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3814086914062	2	626.38224	1250.74993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.89	1	116.8	116.3	117.3	-0.082458								0	0	0	0.45132	1	12566	12566		26.693	0.62953	1		+		44087	16328	29491	29504	49941	49941					0.1345823497345009
PVPLIESE	8	Unmodified	_PVPLIESE_					0	0	0		nc|ENSG00000185658|Q9NSI6-3|BRWD1;ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1;nc|ENSG00000185658|Q9NSI6-4|BRWD1	nc|ENSG00000185658|Q9NSI6-3|BRWD1	nc|ENSG00000185658|Q9NSI6-3|BRWD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2418518066406	2	442.242201	882.469849	-1.4875	-0.00065783	-1.3482	-0.00059624	-2.8357	-0.0012541	442.24148848241214	79.629	2.7036	79.728	77.569	80.272	0.098701					195	94	3	0	0	0	0.86791	1	7368	7368		28.254	2.8041	1	257300			44088	7732	29492	29505	49942	49942					0.0239127391199645
PVPLLCLLL	9	Unmodified	_PVPLLCLLL_					0	0	0			REV__ENST00000419716.7_1_8:70405294-70475816:+|nuORF	REV__ENST00000419716.7_1_8:70405294-70475816:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.8149108886719	2	490.814282	979.614011	-0.13641	-6.6952E-05	2.455	0.001205	2.3186	0.001138	490.8153746767679	73.803	0.85621	74.362	74.024	74.881	0.55891					42	20	3	0	0	0	0.78292	1	8331	8331		29.842	0	1	628450	+		44089	26477	29493	29506	49943	49943					0.1233882413845322
PVPLLLTQ	8	Unmodified	_PVPLLLTQ_					0	0	0		ENST00000554503.5_1_12:57628981-57629323:-|nuORF	ENST00000554503.5_1_12:57628981-57629323:-|nuORF	ENST00000554503.5_1_12:57628981-57629323:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.78082275390625	2	440.778754	879.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.336	1	53.407	52.907	53.907	0.070713								0	0	0	0.30004	1	4351	4351		21.702	1.2205	1				44090	13721	29494	29507	49944	49944					0.09836447425266215
PVPLPRPG	8	Unmodified	_PVPLPRPG_					0	0	0		ENSG00000203786|ENST00000606109|KPRP	ENSG00000203786|ENST00000606109|KPRP	ENSG00000203786|ENST00000606109|KPRP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	416.75469970703125	2	416.755613	831.496673	-1.8373	-0.00076571	0.26309	0.00010964	-1.5742	-0.00065607	416.7557703392063	69.009	0.92305	69.144	68.682	69.606	0.13521					98	39	4	0	0	0	0.86791	2	6242	6219;6242		37.028	1.4582	1	1065300			44091	8394	29495	29508	49945;49946	49946					0.07418427313859866
PVPLPRPG	8	Unmodified	_PVPLPRPG_					0	0	0		ENSG00000203786|ENST00000606109|KPRP	ENSG00000203786|ENST00000606109|KPRP	ENSG00000203786|ENST00000606109|KPRP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	416.7548522949219	2	416.755613	831.496673	-1.2346	-0.00051453	0.0008669	3.6128E-07	-1.2337	-0.00051417	416.7554996796795	69.232	0.75401	69.298	68.944	69.698	0.065506					85	35	3	0	0	0	0.86791	2	6230	6230;6254		28.254	0	1	1082800			44092	8394	29495	29508	49947;49948	49947					0.07418427313859866
PVPMLRDL	8	Unmodified	_PVPMLRDL_					0	0	0		ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2	ENSG00000088930|ENST00000377191|XRN2	ENSG00000088930|ENST00000377191|XRN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76519775390625	2	470.767863	939.521173	-1.9239	-0.00090572	-1.5922	-0.00074958	-3.5162	-0.0016553	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.88915	1	1451	1451		35.201	0	1	93177			44093	1600	29496	29509	49949	49949					0.04899319405046754
PVPQFKQP	8	Unmodified	_PVPQFKQP_					0	0	0			REV__ENSG00000184344|ENST00000329913|GDF3	REV__ENSG00000184344|ENST00000329913|GDF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7677001953125	2	470.766178	939.517802	-1.9239	-0.00090572	1.9879	0.00093583	0.06397	3.0115E-05	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.81548	1	1404	1404		20.482	0	1	93177	+		44094	22664	29497	29510	49950	49950					0.04562392622710831
PVPRKDFV	8	Unmodified	_PVPRKDFV_					0	0	0		nc|ENSG00000164078|Q04912-5|MST1R;nc|ENSG00000164078|Q04912-2|MST1R;ENSG00000164078|ENST00000296474|MST1R;nc|ENSG00000164078|Q04912-7|MST1R	nc|ENSG00000164078|Q04912-5|MST1R	nc|ENSG00000164078|Q04912-5|MST1R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27752685546875	2	479.279452	956.544351	-0.098244	-4.7086E-05	-4.1769	-0.0020019	-4.2751	-0.002049	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.86791	1	8772	8772		28.254	0.17279	1	6799600			44095	5912	29498	29511	49951	49951					0.0643408151404401
PVPSVSLTLI	10	Unmodified	_PVPSVSLTLI_					0	0	0		ENST00000422884.1_1_10:75491660-75492464:+|nuORF	ENST00000422884.1_1_10:75491660-75492464:+|nuORF	ENST00000422884.1_1_10:75491660-75492464:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3163452148438	2	513.3157	1024.61685	-1.5202	-0.00078036	3.031	0.0015559	1.5108	0.00077549	513.3171098240366	43.168	1.3566	43.168	42.754	44.111	0					83	32	4	0	0	0	0.85934	1	3114	3114		35.618	5.3006	1	698430			44096	11487	29499	29512	49952	49952					0.10552370796949617
PVPTLLLL	8	Unmodified	_PVPTLLLL_					0	0	0		ENSG00000154734|ENST00000284984|ADAMTS1	ENSG00000154734|ENST00000284984|ADAMTS1	ENSG00000154734|ENST00000284984|ADAMTS1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.29632568359375	2	433.291497	864.568441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.13	1	109.22	108.72	109.72	0.090057								0	0	0	0.30674	1	13287	13287		15.636	0	1				44097	5291	29500	29513	49953	49953					0.13073921947716372
PVPVVESL	8	Unmodified	_PVPVVESL_					0	0	0		ENST00000514380.5_1_4:26322378-26431729:+|nuORF;nc|ENSG00000168214|Q06330-3|RBPJ;nc|ENSG00000168214|Q06330-2|RBPJ;nc|ENSG00000168214|Q06330-5|RBPJ;nc|ENSG00000168214|Q06330-4|RBPJ;nc|ENSG00000168214|Q06330-6|RBPJ;ENSG00000168214|ENST00000355476|RBPJ;nc|ENSG00000168214|Q06330|RBPJ	ENST00000514380.5_1_4:26322378-26431729:+|nuORF	ENST00000514380.5_1_4:26322378-26431729:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.226806640625	2	420.247286	838.48002	-1.7893	-0.00075197	-0.84547	-0.00035531	-2.6348	-0.0011073	420.24678826135846	81.068	0.64044	81.214	80.888	81.529	0.14512					19	14	2	0	0	0	0.4196	1	7723	7723		28.254	1.4582	1	63760			44098	6382	29501	29514	49954	49954					0.054318816372301626
PVPVVRAM	8	Unmodified	_PVPVVRAM_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2;REV__ENST00000566635.5_1_15:28356911-28362639:-|nuORF	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.75970458984375	2	434.757298	867.500044	2.1234	0.00092316	2.0238	0.00087986	4.1472	0.001803	434.758413846185	87.485	3.2565	87.538	86.101	89.357	0.053024					140	76	4	0	0	0	0.86791	1	8930	8930		28.254	0	1	1543500	+		44099	18791;28872	29502	29515	49955	49955					0.06099354096204479
PVPVVRAM	8	Unmodified	_PVPVVRAM_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2;REV__ENST00000566635.5_1_15:28356911-28362639:-|nuORF	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7597351074219	2	434.757298	867.500044	0.61638	0.00026798	3.1592	0.0013735	3.7756	0.0016415	434.7589702890546	87.554	3.2021	87.703	86.279	89.481	0.14956					123	75	2	0	0	0	0.89457	2	8660	8660;8672		37.028	11.578	1	1373100	+		44100	18791;28872	29502	29515	49956;49957	49956					0.06099354096204479
PVQAACPNH	9	Unmodified	_PVQAACPNH_					0	0	0		ENST00000597830.1_1_19:35067776-35068290:-|nuORF	ENST00000597830.1_1_19:35067776-35068290:-|nuORF	ENST00000597830.1_1_19:35067776-35068290:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7236328125	2	468.721444	935.428335	1.0229	0.00047944	3.483	0.0016326	4.5059	0.002112	468.722942940269	93.238	1.0458	93.679	93.148	94.194	0.44099					53	24	3	0	0	0	0.74721	1	11118	11118		37.159	1.5408	1	566820			44101	14364	29503	29516	49958	49958					-0.041961853283282835
PVQIIPAS	8	Unmodified	_PVQIIPAS_					0	0	0		ENSG00000154727|ENST00000400075|GABPA;ENST00000419271.1_1_7:63353684-63354623:+|nuORF	ENSG00000154727|ENST00000400075|GABPA	ENSG00000154727|ENST00000400075|GABPA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7462463378906	2	412.747453	823.480354	-1.221	-0.00050397	-1.2134	-0.00050081	-2.4344	-0.0010048	412.7467805691387	85.252	3.325	85.252	83.926	87.251	0					125	76	4	0	0	0	0.85277	2	8087	8076;8087		26.796	6.3143	1	835890			44102	5290	29504	29517	49959;49960	49960					0.06155301357091503
PVQIIPAS	8	Unmodified	_PVQIIPAS_					0	0	0		ENSG00000154727|ENST00000400075|GABPA;ENST00000419271.1_1_7:63353684-63354623:+|nuORF	ENSG00000154727|ENST00000400075|GABPA	ENSG00000154727|ENST00000400075|GABPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7461853027344	2	412.747453	823.480354	0.7641	0.00031538	-3.3391	-0.0013782	-2.575	-0.0010628	412.7458735732829	85.139	3.1869	85.067	83.891	87.078	-0.07196					136	73	4	0	0	0	0.81548	1	8760	8760		20.482	0	1	1556000			44103	5290	29504	29517	49961	49961					0.06155301357091503
PVQPHILL	8	Unmodified	_PVQPHILL_					0	0	0		ENST00000355112.7_1_15:91354554-91358468:+|nuORF	ENST00000355112.7_1_15:91354554-91358468:+|nuORF	ENST00000355112.7_1_15:91354554-91358468:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.7849426269531	2	458.78437	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.831	1	57.801	57.301	58.301	-0.029865								0	0	0	0.29199	1	5351	5351		29.842	0	1				44104	10346	29505	29518	49962	49962					0.09303269519432433
PVQPHILL	8	Unmodified	_PVQPHILL_					0	0	0		ENST00000355112.7_1_15:91354554-91358468:+|nuORF	ENST00000355112.7_1_15:91354554-91358468:+|nuORF	ENST00000355112.7_1_15:91354554-91358468:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.783935546875	2	458.78437	915.554188	-0.25469	-0.00011685	0.29484	0.00013527	0.040144	1.8418E-05	458.7843711176116	54.815	1.2175	55.383	54.816	56.033	0.56836					53	28	3	0	0	0	0.92176	1	5620	5620		46.766	6.1938	1	659350			44105	10346	29505	29518	49963	49963					0.09303269519432433
PVRAKSKSA	9	Unmodified	_PVRAKSKSA_					0	0	0		ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.287353515625	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.73802	1	10562	10562		37.812	3.639	1	50843000			44106	1543	29506	29519	49964	49964					0.0874858239999412
PVRAKSKSA	9	Unmodified	_PVRAKSKSA_					0	0	0		ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2882995605469	2	472.287808	942.561064	0.76193	0.00035985	-0.26462	-0.00012498	0.49731	0.00023487	472.28771256093336	99.111	1.7073	99.267	98.769	100.48	0.15659					91	39	3	0	0	0	0.7932	1	10299	10299		24.519	3.5723	1	525470			44107	1543	29506	29519	49965	49965					0.0874858239999412
PVRAKSKSA	9	Unmodified	_PVRAKSKSA_					0	0	0		ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2877197265625	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.67345	1	9765	9765		42.396	13.247	1	40161000			44108	1543	29506	29519	49966	49966					0.0874858239999412
PVRAKSKSA	9	Unmodified	_PVRAKSKSA_					0	0	0		ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	ENSG00000085840|ENST00000371568|ORC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2877197265625	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.7932	1	11485	11485		26.693	1.2427	1	24731000			44109	1543	29506	29519	49967	49967					0.0874858239999412
PVRAMSSPSTG	11	Unmodified	_PVRAMSSPSTG_					0	0	0			REV__ENST00000414660.1_1_X:44493047-44494475:+|nuORF	REV__ENST00000414660.1_1_X:44493047-44494475:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3168334960938	2	545.271498	1088.52844	0.15176	8.2752E-05	2.6191	0.0014281	2.7709	0.0015109	545.2733693180793	90.559	0.11665	90.776	90.71	90.826	0.21737					4	2	2	0	0	0	0.17387	1	9082	9082		30.318	0	1	54126	+		44110	26407	29507	29520	49968	49968					-0.012279927851750472
PVRARRGRGR	10	Unmodified	_PVRARRGRGR_					0	0	0			REV__ENST00000276282.6_1_8:8750374-8750710:-|nuORF	REV__ENST00000276282.6_1_8:8750374-8750710:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.866943359375	2	590.865946	1179.71734	0.84845	0.00050132	-0.15772	-9.3192E-05	0.69073	0.00040813	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.86718	1	11143	11143		27.882	5.9224	1	94771000	+		44111	24576	29508	29521	49969	49969					0.13466885413845375
PVRGAEPIAGG	11	Unmodified	_PVRGAEPIAGG_					0	0	0			REV__ENSG00000282936|ENST00000634965|unknown	REV__ENSG00000282936|ENST00000634965|unknown	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2822875976562	2	512.282723	1022.55089	-0.88857	-0.0004552	-1.7897	-0.00091686	-2.6783	-0.0013721	512.2817341917631	86.454	3.0125	86.454	85.618	88.63	0					129	69	2	0	0	0	0.64498	1	8291	8291		39.253	2.8061	1	265310	+		44112	24052	29509	29522	49970	49970					0.04051974674769099
PVRGGRLN	8	Unmodified	_PVRGGRLN_					0	0	0			REV__ENST00000575985.1_1_17:4890483-4890591:+|nuORF	REV__ENST00000575985.1_1_17:4890483-4890591:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7596740722656	2	434.759218	867.503883	-0.5629	-0.00024473	4.1559	0.0018068	3.593	0.0015621	434.76067973092415	87.168	2.0805	87.623	86.978	89.058	0.45429					87	50	3	0	0	0	0.88915	1	10297	10297		35.201	3.2459	1	1032200	+		44113	28990	29510	29523	49971	49971					0.06483159914273529
PVRGLRGT	8	Unmodified	_PVRGLRGT_					0	0	0		ENST00000467099.6_1_17:18003545-18010551:+|nuORF	ENST00000467099.6_1_17:18003545-18010551:+|nuORF	ENST00000467099.6_1_17:18003545-18010551:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2616271972656	2	428.261594	854.508634	-1.6655	-0.00071328	1.873	0.00080211	0.20742	8.8832E-05	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.8347	1	9112	9112		23.042	0	1	44776000			44114	12144	29511	29524	49972	49972					0.07556044057048439
PVRGSQVRET	10	Unmodified	_PVRGSQVRET_					0	0	0		ENST00000523376.5_1_11:14926604-14927012:+|nuORF	ENST00000523376.5_1_11:14926604-14927012:+|nuORF	ENST00000523376.5_1_11:14926604-14927012:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.812255859375	2	564.809636	1127.60472	-1.1972	-0.0006762	4.4638	0.0025212	3.2666	0.001845	564.8121636275911	46.856	0.54027	46.856	46.535	47.075	0					20	12	2	0	0	0	0.77314	1	3556	3556		40.778	5.1599	1	164290			44115	13201	29512	29525	49973	49973					0.04602147106470511
PVRGVVDSPG	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))PVRGVVDSPG_					1	0	0			REV__chr14:92442816-92443400|14|19.64|0.53|5.21|+|2|SLC24A4,SLC24A4|1	REV__chr14:92442816-92443400|14|19.64|0.53|5.21|+|2|SLC24A4,SLC24A4|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.7739868164062	2	512.774731	1023.53491	-0.050404	-2.5846E-05	-0.62987	-0.00032298	-0.68027	-0.00034882	512.7743229859149	45.174	0.62418	45.105	44.768	45.392	-0.06863					30	14	3	0	0	0	0.74274	1	3262	3262		42.396	9.5837	1	318280	+		44116	15611	29513	29526	49974	49974					0.02408268437852712
PVRHLRTGVA	10	Unmodified	_PVRHLRTGVA_					0	0	0			REV__nc|ENSG00000120341|Q96JE7-3|SEC16B	REV__nc|ENSG00000120341|Q96JE7-3|SEC16B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3323974609375	2	553.333082	1104.65161	-0.75754	-0.00041917	-0.44783	-0.0002478	-1.2054	-0.00066697	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.86272	1	10258	10258		24.519	0	1	4355400	+		44117	25084	29514	29527	49975	49975					0.10347051448297861
PVRHLRTGVA	10	Unmodified	_PVRHLRTGVA_					0	0	0			REV__nc|ENSG00000120341|Q96JE7-3|SEC16B	REV__nc|ENSG00000120341|Q96JE7-3|SEC16B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.3323974609375	2	553.333082	1104.65161	2.7435	0.0015181	-3.9365	-0.0021782	-1.193	-0.00066013	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.80179	1	10396	10396		39.253	6.4404	1	4237100	+		44118	25084	29514	29527	49976	49976					0.10347051448297861
PVRILNLRCLG	11	Unmodified	_PVRILNLRCLG_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3850708007812	2	627.379175	1252.7438	0.9795	0.00061452	3.7075	0.002326	4.687	0.0029405	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.65746	1	13179	13179		37.812	3.639	1	19815000			44119	15193	29515	29528	49977	49977					0.12753393470279661
PVRILNLRCLG	11	Unmodified	_PVRILNLRCLG_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.379638671875	2	627.379175	1252.7438	6.5831	0.0041301	-1.1234	-0.0007048	5.4597	0.0034253	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.72918	1	13804	13804		26.693	1.1189	1	94412			44120	15193	29515	29528	49978	49978					0.12753393470279661
PVRILRTAQDL	11	Unmodified	_PVRILRTAQDL_					0	0	0		nc|ENSG00000064703|Q9UHI6-2|DDX20;ENSG00000064703|ENST00000369702|DDX20	nc|ENSG00000064703|Q9UHI6-2|DDX20	nc|ENSG00000064703|Q9UHI6-2|DDX20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.384033203125	2	641.385511	1280.75647	-0.056243	-3.6073E-05	-1.4846	-0.00095223	-1.5409	-0.00098831	641.38426478806	102.85	1.2882	102.86	102.47	103.76	0.0082016					78	31	4	0	0	0	0.638	2	11053	11008;11053		40.058	9.7405	1	1910600			44121	1110	29516	29529	49979;49980	49980					0.12732128134166487
PVRILRTAQDL	11	Unmodified	_PVRILRTAQDL_					0	0	0		nc|ENSG00000064703|Q9UHI6-2|DDX20;ENSG00000064703|ENST00000369702|DDX20	nc|ENSG00000064703|Q9UHI6-2|DDX20	nc|ENSG00000064703|Q9UHI6-2|DDX20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.384765625	2	641.385511	1280.75647	1.6527	0.00106	-3.143	-0.0020159	-1.4904	-0.00095591	641.383219573957	102.66	1.2178	102.7	102.3	103.51	0.043198					82	29	4	0	0	0	0.59499	1	11115	11115		45.022	7.2107	1	1834000			44122	1110	29516	29529	49981	49981					0.12732128134166487
PVRIVVPLK	9	Unmodified	_PVRIVVPLK_					0	0	0			REV__ENSG00000138600|ENST00000261854|SPPL2A	REV__ENSG00000138600|ENST00000261854|SPPL2A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.854736328125	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.16	1	115.09	114.59	115.59	-0.072342								0	0	0	0.33676	1	12431	12431		18.324	10.634	1		+		44123	19480	29517	29530	49982	49982					0.1764807988731718
PVRKPGPLP	9	Unmodified	_PVRKPGPLP_					0	0	0		nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB;ENSG00000186260|ENST00000571589|MRTFB	nc|ENSG00000186260|Q9ULH7-4|MRTFB	nc|ENSG00000186260|Q9ULH7-4|MRTFB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8016662597656	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.7932	1	9929	9929		25.45	0	1	17379000			44124	7787	29518	29531	49983	49983					0.1102236078503438
PVRKPGPLP	9	Unmodified	_PVRKPGPLP_					0	0	0		nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB;ENSG00000186260|ENST00000571589|MRTFB	nc|ENSG00000186260|Q9ULH7-4|MRTFB	nc|ENSG00000186260|Q9ULH7-4|MRTFB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.80108642578125	2	480.803094	959.591636	-0.2736	-0.00013155	-3.9156	-0.0018826	-4.1892	-0.0020142	480.80110367170755	95.033	3.9341	95.453	94.933	98.867	0.41964					263	95	5	0	0	0	0.7932	1	11474	11474		24.203	0	1	9403500			44125	7787	29518	29531	49984	49984					0.1102236078503438
PVRLDTLIY	9	Unmodified	_PVRLDTLIY_					0	0	0			REV__ENSG00000112139|ENST00000434837|MDGA1	REV__ENSG00000112139|ENST00000434837|MDGA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3158569335938	2	545.318774	1088.623	-0.53242	-0.00029034	-3.3466	-0.0018249	-3.879	-0.0021153	545.3168302794771	93.277	0.88976	93.727	93.4	94.289	0.44988					49	20	3	0	0	0	0.7932	1	11113	11113		26.693	1.1189	1	539260	+		44126	17917	29519	29532	49985	49985					0.08222889028502323
PVRLFQPKAAS	11	Unmodified	_PVRLFQPKAAS_					0	0	0		ENSG00000204518|ENST00000376221|AADACL4	ENSG00000204518|ENST00000376221|AADACL4	ENSG00000204518|ENST00000376221|AADACL4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5751953125	3	405.239907	1212.69789	-0.9621	-0.00038988	1.8579	0.00075288	0.89577	0.000363	405.24065528947847	103.14	0.51096	103.14	102.87	103.38	0					23	12	2	0	0	0	0.72374	1	10573	10573		27.644	3.4121	1	2123200			44127	8450	29520	29533	49986	49986					0.10005071559726275
PVRLGRGG	8	Unmodified	_PVRLGRGG_					0	0	0		ENST00000314485.11_2_1:160063696-160063849:-|nuORF	REV__ENST00000293379.8_1_12:54813056-54813194:-|nuORF	REV__ENST00000293379.8_1_12:54813056-54813194:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2485046386719	2	406.248486	810.48242	-0.18704	-7.5983E-05	0.46265	0.00018795	0.27561	0.00011197	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.85277	1	9057	9057		25.45	0	1	50007000			44128	9961	29521	29534	49987	49987					0.06959774885569914
PVRLGRGG	8	Unmodified	_PVRLGRGG_					0	0	0		ENST00000314485.11_2_1:160063696-160063849:-|nuORF	REV__ENST00000293379.8_1_12:54813056-54813194:-|nuORF	REV__ENST00000293379.8_1_12:54813056-54813194:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2486267089844	2	406.248486	810.48242	1.1517	0.00046786	-0.91843	-0.00037311	0.23322	9.4746E-05	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.86288	2	9202	9202;9214		33.516	6.7195	1	58759000			44129	9961	29521	29534	49988;49989	49988					0.06959774885569914
PVRLGRGG	8	Unmodified	_PVRLGRGG_					0	0	0		ENST00000314485.11_2_1:160063696-160063849:-|nuORF	REV__ENST00000293379.8_1_12:54813056-54813194:-|nuORF	REV__ENST00000293379.8_1_12:54813056-54813194:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.248291015625	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.81724	1	9265	9265		14.664	0	1	56664000			44130	9961	29521	29534	49990	49990					0.06959774885569914
PVRLGRGG	8	Unmodified	_PVRLGRGG_					0	0	0		ENST00000314485.11_2_1:160063696-160063849:-|nuORF	REV__ENST00000293379.8_1_12:54813056-54813194:-|nuORF	REV__ENST00000293379.8_1_12:54813056-54813194:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24859619140625	2	406.248486	810.48242	3.1451	0.0012777	-2.8339	-0.0011513	0.31112	0.00012639	406.2472569987741	110.94	0.91206	110.99	110.73	111.64	0.054062					48	31	2	0	0	0	0.81724	1	13442	13442		14.664	0.88877	1	457940			44131	9961	29521	29534	49991	49991					0.06959774885569914
PVRLGRGG	8	Unmodified	_PVRLGRGG_					0	0	0		ENST00000314485.11_2_1:160063696-160063849:-|nuORF	REV__ENST00000293379.8_1_12:54813056-54813194:-|nuORF	REV__ENST00000293379.8_1_12:54813056-54813194:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2509460449219	2	406.248486	810.48242	3.1468	0.0012784	-2.3396	-0.00095045	0.80725	0.00032794	406.2474300116592	115.25	0.26062	115.25	115.15	115.41	-0.0021133					16	12	2	0	0	0	0.86294	1	13887	13887		8.8223	4.1406	1	46673			44132	9961	29521	29534	49992	49992					0.06959774885569914
PVRLGRNALVI	11	Unmodified	_PVRLGRNALVI_					0	0	0			REV__ENSG00000150893|ENST00000280481|FREM2	REV__ENSG00000150893|ENST00000280481|FREM2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3661499023438	2	604.385314	1206.75608	-1.2752	-0.00077073	-1.2728	-0.00076925	-2.548	-0.00154	604.3834110873219	104.24	0.21379	104.34	104.14	104.36	0.093857					6	4	2	0	0	0	0.1728	1	10978	10978		39.253	0	1	380230	+		44133	20223	29522	29535	49993	49993					0.1609675320498809
PVRLHLALDIA	11	Unmodified	_PVRLHLALDIA_					0	0	0		ENST00000498522.5_1_9:35605559-35607650:+|nuORF;ENSG00000107140|ENST00000336395|TESK1	ENST00000498522.5_1_9:35605559-35607650:+|nuORF	ENST00000498522.5_1_9:35605559-35607650:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5838623046875	3	406.583674	1216.72919	3.1308	0.0012729	-2.164	-0.00087985	0.96679	0.00039308	406.5827071519945	112.24	0.82966	112.27	112.06	112.89	0.030602					58	32	2	0	0	0	0.76579	1	13605	13605		18.531	1.8137	1	1459000			44134	2331	29523	29536	49994	49994					0.12949644593800258
PVRLRTGG	8	Unmodified	_PVRLRTGG_					0	0	0		ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2615966796875	2	428.261594	854.508634	-1.1356	-0.00048635	1.4339	0.00061408	0.29824	0.00012772	428.2621524287907	91.088	2.5476	91.088	90.477	93.025	0					222	59	5	0	0	0	0.8347	3	8892	8892;8916;8988		30.504	3.7209	1	33233000			44135	11162	29524	29537	49995;49996;49997	49995					0.07556044057048439
PVRLRTGG	8	Unmodified	_PVRLRTGG_					0	0	0		ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.26153564453125	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.84341	2	9472	9436;9472		30.504	1.3541	1	52688000			44136	11162	29524	29537	49998;49999	49999					0.07556044057048439
PVRLRTGG	8	Unmodified	_PVRLRTGG_					0	0	0		ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2616882324219	2	428.261594	854.508634	1.4286	0.0006118	-1.267	-0.00054261	0.16155	6.9187E-05	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.87064	2	9652	9604;9652		30.504	6.1071	1	57042000			44137	11162	29524	29537	50000;50001	50001					0.07556044057048439
PVRLRTGG	8	Unmodified	_PVRLRTGG_					0	0	0		ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2616882324219	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.87479	2	9425	9425;9461		31.955	7.4612	1	55300000			44138	11162	29524	29537	50002;50003	50002					0.07556044057048439
PVRLRTGG	8	Unmodified	_PVRLRTGG_					0	0	0		ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.26165771484375	2	428.261594	854.508634	0.64465	0.00027608	-0.51085	-0.00021878	0.1338	5.7301E-05	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.84341	2	9103	9103;9163		30.504	2.5004	1	40631000			44139	11162	29524	29537	50004;50005	50004					0.07556044057048439
PVRLRTGG	8	Unmodified	_PVRLRTGG_					0	0	0		ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	ENST00000397820.4_1_19:10980033-10980441:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2615966796875	2	428.261594	854.508634	-1.8497	-0.00079216	1.9562	0.00083775	0.10645	4.5588E-05	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.87922	1	9069	9069		31.955	2.1133	1	31323000			44140	11162	29524	29537	50006	50006					0.07556044057048439
PVRLVGMA	8	Unmodified	_PVRLVGMA_					0	0	0			REV__ENSG00000140832|ENST00000268485|MARVELD3	REV__ENSG00000140832|ENST00000268485|MARVELD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75140380859375	2	421.749473	841.484393	2.261	0.00095358	2.5621	0.0010806	4.8232	0.0020342	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.83466	1	7632	7632		23.037	1.3344	1	532850	+		44141	19644	29525	29538	50007	50007					0.057310675791541144
PVRNKSMSPI	10	Unmodified	_PVRNKSMSPI_					0	0	0			REV__nc|ENSG00000135404|P08962-3|CD63	REV__nc|ENSG00000135404|P08962-3|CD63	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.810791015625	2	564.813333	1127.61211	-0.10009	-5.6535E-05	-3.4905	-0.0019715	-3.5906	-0.002028	564.8112494136785	45.358	0.52238	46.254	45.964	46.486	0.89542					22	12	2	0	0	0	0.46422	1	4229	4229		58.782	4.0056	1	1301000	+		44142	19216	29526	29539	50008	50008					0.05341163382558989
PVRNKSMSPI	10	Unmodified	_PVRNKSMSPI_					0	0	0			REV__nc|ENSG00000135404|P08962-3|CD63	REV__nc|ENSG00000135404|P08962-3|CD63	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	564.813333	1127.61211	-0.36349	-0.0002053	-3.205	-0.0018102	-3.5685	-0.0020155	564.8114288520378	45.517	0.52866	45.988	45.725	46.254	0.47139	-0.13256	0.00012998	NaN	58.782	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1401300	+		44143	19216	29526	29539							0.05341163382558989
PVRNKSMSPI	10	Unmodified	_PVRNKSMSPI_					0	0	0			REV__nc|ENSG00000135404|P08962-3|CD63	REV__nc|ENSG00000135404|P08962-3|CD63	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	564.813333	1127.61211	-0.10009	-5.6535E-05	-3.4905	-0.0019715	-3.5906	-0.002028	564.8112494136785	45.358	0.52238	46.254	45.964	46.486	0.89542	0.13256	-0.00019249	NaN	58.782	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1301000	+		44144	19216	29526	29539							0.05341163382558989
PVRPGDHRRG	10	Unmodified	_PVRPGDHRRG_					0	0	0			REV__ENST00000379937.6_3_14:105695225-105767012:-|nuORF;REV__ENST00000548421.2_1_14:105722813-105767174:-|nuORF	REV__ENST00000379937.6_3_14:105695225-105767012:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.81689453125	2	573.815587	1145.61662	0.47618	0.00027324	2.0381	0.0011695	2.5143	0.0014427	573.8166032618375	36.182	1.0397	36.213	35.726	36.765	0.031132					71	29	3	0	0	0	0.74274	1	1985	1985		42.396	3.1433	1	967530	+		44145	25932;28570	29527	29540	50009	50009					0.04963808640309253
PVRPPLHL	8	Unmodified	_PVRPPLHL_					0	0	0		ENST00000589069.1_1_19:36605452-36605638:-|nuORF;ENST00000586789.5_1_19:36605452-36605788:-|nuORF	ENST00000589069.1_1_19:36605452-36605638:-|nuORF	ENST00000589069.1_1_19:36605452-36605638:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7907409667969	2	464.789987	927.565421	-1.9025	-0.00088428	3.506	0.0016296	1.6035	0.00074527	464.7914872059108	34.459	1.5924	34.459	34.009	35.601	0					104	42	3	0	0	0	0.87276	1	1899	1899		29.842	1.5873	1	277220			44146	14177	29528	29541	50010	50010					0.09874091613551172
PVRPPVAP	8	Unmodified	_PVRPPVAP_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7548828125	2	416.755613	831.496673	0.85654	0.00035697	-2.1049	-0.00087723	-1.2484	-0.00052026	416.7546905427035	66.077	1.7412	66.462	65.937	67.678	0.38581					138	48	4	0	0	0	0.88915	1	7267	7267		35.201	0	1	3980900	+		44147	20385	29529	29542	50011	50011					0.07418427313848497
PVRPPVEPK	9	Unmodified	_PVRPPVEPK_					0	0	0			REV__ENSG00000116285|ENST00000377482|ERRFI1	REV__ENSG00000116285|ENST00000377482|ERRFI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8043518066406	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.7932	1	8147	8147		23.042	1.0826	1	1874600	+		44148	18195	29530	29543	50012	50012					0.08902039576844345
PVRQQKKNKV	10	Unmodified	_PVRQQKKNKV_					0	0	0		nc|ENSG00000136261|Q9Y6E2-2|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF	nc|ENSG00000136261|Q9Y6E2-2|BZW2	nc|ENSG00000136261|Q9Y6E2-2|BZW2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.92230224609375	3	408.922689	1223.74624	-1.7912	-0.00073246	0.82572	0.00033766	-0.96547	-0.0003948	408.92296036119325	104.35	2.8249	104.52	103.85	106.67	0.17096					215	70	5	0	0	0	0.86718	1	11132	11132		32.751	4.1738	1	5290200			44149	12439	29531	29544	50013	50013					0.14331565199586294
PVRQVLPSGT	10	Unmodified	_PVRQVLPSGT_					0	0	0		ENST00000263253.8_1_22:41523672-41525951:+|nuORF	ENST00000263253.8_1_22:41523672-41525951:+|nuORF	ENST00000263253.8_1_22:41523672-41525951:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3055419921875	2	527.306198	1052.59784	-0.62415	-0.00032912	-2.1989	-0.0011595	-2.8231	-0.0014886	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.82886	1	10045	10045		37.812	12.361	1	949980			44150	9458	29532	29545	50014	50014					0.07364834225927552
PVRRAKPLW	9	Unmodified	_PVRRAKPLW_					0	0	0			REV__ENST00000589137.5_1_19:36032474-36032856:-|nuORF	REV__ENST00000589137.5_1_19:36032474-36032856:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.8457641601562	2	561.848368	1121.68218	-1.2102	-0.00067997	-3.3965	-0.0019083	-4.6068	-0.0025883	561.8462778990414	97.077	2.3757	97.139	96.565	98.941	0.062225					142	54	5	0	0	0	0.7932	1	10247	10247		25.45	1.9275	1	1718900	+		44151	29140	29533	29546	50015	50015					0.12620829833326752
PVRRIATREL	10	Unmodified	_PVRRIATREL_					0	0	0			REV__ENSG00000148602|ENST00000372105|LRIT1	REV__ENSG00000148602|ENST00000372105|LRIT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.8729248046875	2	605.872571	1209.73059	0.90131	0.00054608	-1.6366	-0.00099159	-0.73532	-0.00044551	605.871436730015	100.15	1.5268	100.3	99.851	101.38	0.15073					77	35	3	0	0	0	0.70553	1	10453	10453		44.377	0	1	806450	+		44152	20125	29534	29547	50016	50016					0.13411278682565353
PVRRSLGRILA	11	Unmodified	_PVRRSLGRILA_					0	0	0			REV__ENST00000377291.2_1_5:175110069-175110369:+|nuORF	REV__ENST00000377291.2_1_5:175110069-175110369:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2657775878906	3	413.266568	1236.77787	0.21308	8.806E-05	3.766	0.0015564	3.9791	0.0016444	413.2670936743631	41.866	2.062	41.835	40.73	42.792	-0.030991					122	53	4	0	0	0	0.75457	1	2997	2997		21.032	0.19508	1	252870	+		44153	25863	29535	29548	50017	50017					0.16895557953580465
PVRRSLGRILA	11	Unmodified	_PVRRSLGRILA_					0	0	0			REV__ENST00000377291.2_1_5:175110069-175110369:+|nuORF	REV__ENST00000377291.2_1_5:175110069-175110369:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2667541503906	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.62	1	41.579	41.079	42.079	-0.04081								0	0	0	0.56276	1	3142	3142		19.263	0	1		+		44154	25863	29535	29548	50018	50018					0.16895557953580465
PVRRSSSGRTP	11	Unmodified	_PVRRSSSGRTP_					0	0	0			REV__ENST00000540643.5_2_22:32002357-32009472:+|nuORF	REV__ENST00000540643.5_2_22:32002357-32009472:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	600.3331909179688	2	600.33381	1198.65307	2.3588	0.0014161	-2.5944	-0.0015575	-0.23553	-0.00014139	600.3322451501099	94.355	2.7014	94.296	92.89	95.591	-0.059204					137	64	3	0	0	0	0.67778	1	10094	10094		35.152	0	1	661970	+		44155	28467	29536	29549	50019	50019					0.061686407463867
PVRSGGRRG	9	Unmodified	_PVRSGGRRG_					0	0	0			REV__ENST00000303236.7_1_2:88926794-88926968:-|nuORF	REV__ENST00000303236.7_1_2:88926794-88926968:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2040100097656	2	471.273024	940.531495	0.015432	7.2729E-06	3.4471	0.0016245	3.4625	0.0016318	471.2747883586327	28.989	0.38948	28.816	28.631	29.021	-0.17336					18	8	3	0	0	0	0.20789	1	1786	1786		37.812	0	1	133300	+		44156	24797	29537	29550	50020	50020					0.058850631745372084
PVRSGRAL	8	Unmodified	_PVRSGRAL_					0	0	0			REV__ENST00000437972.1_2_3:48229548-48229873:-|nuORF	REV__ENST00000437972.1_2_3:48229548-48229873:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2616882324219	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.87479	1	9351	9351		30.504	3.7075	1	52688000	+		44157	24786	29538	29551	50021	50021					0.07556044057048439
PVRSKPFRGLR	11	Unmodified	_PVRSKPFRGLR_					0	0	0			REV__ENST00000376113.6_2_2:127805867-127806032:-|nuORF	REV__ENST00000376113.6_2_2:127805867-127806032:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2730712890625	3	438.270201	1311.78877	2.7278	0.0011955	3.6527	0.0016009	6.3805	0.0027964	438.2717172692411	106.49	1.037	106.46	105.98	107.01	-0.034134					77	23	5	0	0	0	0.73647	1	11774	11774		25.068	4.0355	1	3866800	+		44158	25832	29539	29552	50022	50022					0.14534960327841873
PVRSRPGT	8	Unmodified	_PVRSRPGT_					0	0	0			REV__chr16:84195158-84195296|17|19.47|0.85|4.52|+|0|ADAD2,ADAD2|1	REV__chr16:84195158-84195296|17|19.47|0.85|4.52|+|0|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25146484375	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.884	1	7749	7749		33.516	0	1	2823900	+		44159	15644	29540	29553	50023	50023					0.04839453677391248
PVRSRPGT	8	Unmodified	_PVRSRPGT_					0	0	0			REV__chr16:84195158-84195296|17|19.47|0.85|4.52|+|0|ADAD2,ADAD2|1	REV__chr16:84195158-84195296|17|19.47|0.85|4.52|+|0|ADAD2,ADAD2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25140380859375	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.884	1	8008	8008		33.516	0	1	3292300	+		44160	15644	29540	29553	50024	50024					0.04839453677391248
PVRSTLHSI	9	Unmodified	_PVRSTLHSI_					0	0	0			REV__ENST00000413990.1_1_1:158146374-158146917:-|nuORF	REV__ENST00000413990.1_1_1:158146374-158146917:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.2947998046875	2	505.293091	1008.57163	-1.5977	-0.00080733	-1.6153	-0.00081618	-3.213	-0.0016235	505.2922038023598	97.2	2.3775	97.402	96.877	99.255	0.20206					132	54	3	0	0	0	0.7932	1	10080	10080		24.203	4.8428	1	991360	+		44161	26400	29541	29554	50025	50025					0.06768565054437659
PVRTKTKN	8	Unmodified	_PVRTKTKN_					0	0	0		L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|89|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|89|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|89|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2879333496094	2	472.287808	942.561064	-0.97076	-0.00045848	0.82719	0.00039067	-0.14357	-6.7805E-05	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.87064	1	9658	9658		29.15	0.89528	1	26024000			44162	14648	29542	29555	50026	50026					0.08748582399982752
PVRTKTKN	8	Unmodified	_PVRTKTKN_					0	0	0		L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|89|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|89|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|89|2|sense	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2875671386719	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.52	1	116.49	115.99	116.99	-0.02433								0	0	0	0.29596	1	12904	12904		35.618	5.1146	1				44163	14648	29542	29555	50027	50027					0.08748582399982752
PVRTKTKN	8	Unmodified	_PVRTKTKN_					0	0	0		L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|89|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|89|2|sense	L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|89|2|sense	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2881164550781	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.99	1	119.88	119.38	120.38	-0.11421								0	0	0	0.29264	1	12969	12969		29.15	3.6994	1				44164	14648	29542	29555	50028	50028					0.08748582399982752
PVRVLELSESH	11	Unmodified	_PVRVLELSESH_					0	0	0		ENST00000520579.5_1_5:149495328-149514444:-|nuORF;ENSG00000113721|ENST00000261799|PDGFRB	ENST00000520579.5_1_5:149495328-149514444:-|nuORF	ENST00000520579.5_1_5:149495328-149514444:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.3693237304688	2	633.346052	1264.67755	-0.1511	-9.5699E-05	0.30651	0.00019413	0.15541	9.8431E-05	633.3444586754514	97.917	0.58932	97.973	97.548	98.138	0.056839					15	13	2	0	0	0	0.17431	1	10293	10293		31.53	8.4873	1	52492			44165	2740	29543	29556	50029	50029					0.05579856109261527
PVRVLELSESH	11	Unmodified	_PVRVLELSESH_					0	0	0		ENST00000520579.5_1_5:149495328-149514444:-|nuORF;ENSG00000113721|ENST00000261799|PDGFRB	ENST00000520579.5_1_5:149495328-149514444:-|nuORF	ENST00000520579.5_1_5:149495328-149514444:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.368896484375	2	633.346052	1264.67755	-1.181	-0.00074796	0.80868	0.00051218	-0.37228	-0.00023578	633.3478766901613	97.631	0.73381	97.833	97.516	98.25	0.20207					20	16	2	0	0	0	0.17431	1	10064	10064		31.53	8.1519	1	58612			44166	2740	29543	29556	50030	50030					0.05579856109261527
PVRVLGIHTVF	11	Unmodified	_PVRVLGIHTVF_					0	0	0		ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.3712158203125	2	619.374415	1236.73428	-0.10661	-6.6034E-05	-3.8471	-0.0023828	-3.9537	-0.0024488	619.3719649656875	101.89	1.4654	101.89	101.45	102.91	0					98	36	4	0	0	0	0.36477	2	10382	10382;10446		62.107	17.73	1	1989800			44167	11631	29544	29557	50031;50032	50031					0.12537948456406411
PVRVLGIHTVF	11	Unmodified	_PVRVLGIHTVF_					0	0	0		ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.371337890625	2	619.374415	1236.73428	-0.31167	-0.00019304	-2.5734	-0.0015939	-2.885	-0.0017869	619.3734435178485	101.78	1.7281	101.8	101.4	103.13	0.01989					94	41	4	0	0	0	0.67778	4	10868	10847;10868;10892;10916		35.152	9.2897	1	3076000			44168	11631	29544	29557	50033;50034;50035;50036	50034					0.12537948456406411
PVRVLGIHTVF	11	Unmodified	_PVRVLGIHTVF_					0	0	0		ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.3710327148438	2	619.374415	1236.73428	0.60184	0.00037276	-4.1787	-0.0025882	-3.5769	-0.0022154	619.3721424545147	101.51	1.6945	101.55	101.22	102.91	0.044823					109	40	4	0	0	0	0.65746	3	10937	10937;10949;10973		37.812	8.4591	1	2715800			44169	11631	29544	29557	50037;50038;50039	50037					0.12537948456406411
PVRVLGIHTVF	11	Unmodified	_PVRVLGIHTVF_					0	0	0		ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.3714599609375	2	619.374415	1236.73428	0.91931	0.0005694	-4.3463	-0.002692	-3.4269	-0.0021226	619.3720836676316	101.53	1.7011	101.67	101.29	102.99	0.14102					92	41	4	0	0	0	0.66929	1	10661	10661		36.447	11.928	1	2053400			44170	11631	29544	29557	50040	50040					0.12537948456406411
PVRVLGIHTVF	11	Unmodified	_PVRVLGIHTVF_					0	0	0		ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.3715209960938	2	619.374415	1236.73428	-1.2262	-0.00075948	-3.0346	-0.0018796	-4.2608	-0.0026391	619.3724290211392	101.55	1.3094	101.7	101.32	102.63	0.15505					84	32	4	0	0	0	0.6921	1	10585	10585		32.812	3.6424	1	1786600			44171	11631	29544	29557	50041	50041					0.12537948456406411
PVRVPAPAPA	10	Unmodified	_PVRVPAPAPA_					0	0	0		ENSG00000186838|ENST00000335426|SELENOV	ENSG00000186838|ENST00000335426|SELENOV	ENSG00000186838|ENST00000335426|SELENOV	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7904968261719	2	487.792727	973.5709	-0.70733	-0.00034503	-3.6605	-0.0017856	-4.3678	-0.0021306	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.86452	1	8047	8047		30.504	0.6621	1	2348200			44172	7824	29545	29558	50042	50042					0.0830577040536582
PVSALKPL	8	Unmodified	_PVSALKPL_					0	0	0		ENSG00000251322|ENST00000262795|SHANK3;nc|ENSG00000251322|Q9BYB0-3|SHANK3;ENST00000414786.6_1_22:51113069-51169737:+|nuORF;nc|ENSG00000251322|Q9BYB0|SHANK3	ENSG00000251322|ENST00000262795|SHANK3	ENSG00000251322|ENST00000262795|SHANK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2682189941406	2	412.765646	823.516739	-0.62558	-0.00025822	2.0435	0.0008435	1.4179	0.00058528	412.7673203899957	51.451	2.0511	51.366	50.837	52.888	-0.084538					105	61	2	0	0	0	0.85277	1	4095	4095		25.45	4.9683	1	311840			44173	8852	29546	29559	50043	50043					0.09792178253792372
PVSFVRIV	8	Unmodified	_PVSFVRIV_					0	0	0			REV__nc|ENSG00000070540|Q5MNZ9-2|WIPI1	REV__nc|ENSG00000070540|Q5MNZ9-2|WIPI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.7841491699219	2	458.78437	915.554188	0.3745	0.00017181	-0.67305	-0.00030878	-0.29855	-0.00013697	458.78441818717437	57.78	1.0451	57.891	57.321	58.366	0.11027					69	51	2	0	0	0	0.79403	1	4903	4903		63.306	10.37	1	309670	+		44174	16604	29547	29560	50044	50044					0.09303269519421065
PVSFVRIV	8	Unmodified	_PVSFVRIV_					0	0	0			REV__nc|ENSG00000070540|Q5MNZ9-2|WIPI1	REV__nc|ENSG00000070540|Q5MNZ9-2|WIPI1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	458.78437	915.554188	0.3745	0.00017181	-0.67305	-0.00030878	-0.29855	-0.00013697	458.78441818717437	57.78	1.0451	57.891	57.321	58.366	0.11027	0.045691	-0.00078508	NaN	63.306	69	51	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	309670	+		44175	16604	29547	29560							0.09303269519421065
PVSFVRIV	8	Unmodified	_PVSFVRIV_					0	0	0			REV__nc|ENSG00000070540|Q5MNZ9-2|WIPI1	REV__nc|ENSG00000070540|Q5MNZ9-2|WIPI1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	458.78437	915.554188	-0.67686	-0.00031053	0.5976	0.00027417	-0.079264	-3.6365E-05	458.7848225604204	57.816	1.1931	57.799	57.276	58.469	-0.016426	-0.045691	0.00038082	NaN	63.306	69	54	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	303190	+		44176	16604	29547	29560							0.09303269519421065
PVSGILLN	8	Unmodified	_PVSGILLN_					0	0	0		ENSG00000149435|ENST00000335694|GGTLC1	ENSG00000149435|ENST00000335694|GGTLC1	ENSG00000149435|ENST00000335694|GGTLC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2575378417969	2	406.747453	811.480354	0.34134	0.00013884	4.0335	0.0016406	4.3748	0.0017794	406.7489556835273	57.241	0.4988	57.346	57.044	57.542	0.10549					41	24	2	0	0	0	0.4196	1	4853	4853		11.511	3.8207	1	121130			44177	5025	29548	29561	50045	50045					0.06707301357096185
PVSHRLKWYVL	11	Unmodified	_PVSHRLKWYVL_					0	0	0			REV__ENSG00000161509|ENST00000293190|GRIN2C	REV__ENSG00000161509|ENST00000293190|GRIN2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.60797119140625	3	466.60659	1396.79794	0.32068	0.00014963	2.6768	0.001249	2.9975	0.0013986	466.60769889886956	100.37	2.2833	100.42	99.018	101.3	0.046356					147	53	4	0	0	0	0.70584	1	10664	10664		30.569	12.038	1	458180	+		44178	20765	29549	29562	50046	50046					0.11541308893492896
PVSIIINL	8	Unmodified	_PVSIIINL_					0	0	0			REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7800598144531	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.84341	1	3247	3247		24.203	4.8428	1	15771000	+		44179	16706	29550	29563	50047	50047					0.10388447425270897
PVSKPHSK	8	Unmodified	_PVSKPHSK_					0	0	0			REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF	REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2554016113281	2	440.255977	878.497401	-1.4995	-0.00066014	-0.016865	-7.4251E-06	-1.5163	-0.00066757	440.2559096543124	60.596	0.55002	60.697	60.508	61.058	0.10082					39	23	2	0	0	0	0.89043	1	5231	5231		35.618	5.1146	1	235130	+		44180	19933	29551	29564	50048	50048					0.05329221962904285
PVSLARRN	8	Unmodified	_PVSLARRN_					0	0	0		ENSG00000142149|ENST00000270112|HUNK	ENSG00000142149|ENST00000270112|HUNK	ENSG00000142149|ENST00000270112|HUNK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.77227783203125	2	456.772326	911.530098	-1.1567	-0.00052834	1.2544	0.00057299	0.097763	4.4655E-05	456.7726883987969	89.791	2.1769	90.003	88.879	91.056	0.21271					109	51	4	0	0	0	0.884	1	8977	8977		33.516	3.0119	1	1072500			44181	4543	29552	29565	50049	50049					0.07079429085752054
PVSLLLTLG	9	Unmodified	_PVSLLLTLG_					0	0	0		ENST00000217381.2_1_20:31995804-31996281:-|nuORF	ENST00000217381.2_1_20:31995804-31996281:-|nuORF	ENST00000217381.2_1_20:31995804-31996281:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79302978515625	2	456.791861	911.569169	-1.1724	-0.00053555	3.9802	0.0018181	2.8078	0.0012826	456.7935742947897	38.88	1.6337	38.833	37.942	39.576	-0.047001					120	37	4	0	0	0	0.7932	1	2782	2782		25.45	6.0902	1	2323700			44182	9150	29553	29566	50050	50050					0.10984716596749422
PVSLLLTLG	9	Unmodified	_PVSLLLTLG_					0	0	0		ENST00000217381.2_1_20:31995804-31996281:-|nuORF	ENST00000217381.2_1_20:31995804-31996281:-|nuORF	ENST00000217381.2_1_20:31995804-31996281:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7917785644531	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.78536	1	2886	2886		29.15	3.6994	1	605230			44183	9150	29553	29566	50051	50051					0.10984716596749422
PVSLMGVLK	9	Unmodified	_PVSLMGVLK_					0	0	0		ENST00000483224.5_1_3:66354939-66420969:+|nuORF	ENST00000483224.5_1_3:66354939-66420969:+|nuORF	ENST00000483224.5_1_3:66354939-66420969:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2876892089844	2	472.285889	942.557224	0.72641	0.00034307	3.0865	0.0014577	3.8129	0.0018008	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.7932	1	9687	9687		23.042	3.6825	1	48696000			44184	12505	29554	29567	50052	50052					0.08364776581925071
PVSRKLSTTG	10	Unmodified	_PVSRKLSTTG_					0	0	0		nc|ENSG00000102804|Q15714-4|TSC22D1;ENSG00000102804|ENST00000458659|TSC22D1	nc|ENSG00000102804|Q15714-4|TSC22D1	nc|ENSG00000102804|Q15714-4|TSC22D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.86471	1	9005	9005		30.318	2.4355	1	12189000			44185	2021	29555	29568	50053	50053					0.07224530363282611
PVSSGPVLL	9	Unmodified	_PVSSGPVLL_					0	0	0		ENST00000354700.9_1_1:1228553-1228895:-|nuORF	ENST00000354700.9_1_1:1228553-1228895:-|nuORF	ENST00000354700.9_1_1:1228553-1228895:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.76025390625	2	434.760561	867.506569	-1.1839	-0.00051471	-1.2859	-0.00055904	-2.4698	-0.0010738	434.7597390953803	87.854	3.3898	87.854	86.125	89.515	0					151	78	4	0	0	0	0.77546	1	8469	8469		31.955	0	1	789230			44186	10341	29556	29569	50054	50054					0.06751570528570028
PVSSGPVLL	9	Unmodified	_PVSSGPVLL_					0	0	0		ENST00000354700.9_1_1:1228553-1228895:-|nuORF	ENST00000354700.9_1_1:1228553-1228895:-|nuORF	ENST00000354700.9_1_1:1228553-1228895:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7596435546875	2	434.760561	867.506569	0.61637	0.00026798	-4.3451	-0.0018891	-3.7288	-0.0016211	434.7589702890546	87.554	3.2021	87.703	86.279	89.481	0.14956					123	75	2	0	0	0	0.76996	1	8685	8685		33.516	0	1	1373100			44187	10341	29556	29569	50055	50055					0.06751570528570028
PVSSKEPLVP	10	Unmodified	_PVSSKEPLVP_					0	0	0			REV__ENST00000446190.5_1_12:132599077-132606470:+|nuORF	REV__ENST00000446190.5_1_12:132599077-132606470:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	527.3056030273438	2	526.802957	1051.59136	-0.10039	-5.2887E-05	3.5057	0.0018468	3.4053	0.0017939	526.807278834427	99.072	1.5943	99.295	98.744	100.34	0.22263					122	37	5	0	0	0	0.8545	1	10367	10367		36.447	6.129	1	2555900	+		44188	26801	29557	29570	50056	50056					0.06762896274540253
PVSSLVPL	8	Unmodified	_PVSSLVPL_					0	0	0			REV__ENST00000535126.1_1_11:64084335-64084494:-|nuORF	REV__ENST00000535126.1_1_11:64084335-64084494:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24847412109375	2	406.249829	810.485105	0.62319	0.00025317	-3.6411	-0.0014792	-3.0179	-0.001226	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.86288	1	8858	8858		26.796	0	1	38001000	+		44189	28378	29558	29571	50057	50057					0.07228185499855044
PVSSSALKYLL	11	Unmodified	_PVSSSALKYLL_					0	0	0		ENSG00000184210|ENST00000333026|DGAT2L6	ENSG00000184210|ENST00000333026|DGAT2L6	ENSG00000184210|ENST00000333026|DGAT2L6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3428955078125	2	589.344989	1176.67542	-1.324	-0.0007803	-2.248	-0.0013248	-3.572	-0.0021051	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.68532	1	9638	9638		33.922	2.3918	1	17904000			44190	7591	29559	29572	50058	50058					0.09415427371436635
PVSTDKIIP	9	Unmodified	_PVSTDKIIP_					0	0	0		ENST00000396049.4_1_2:74383511-74383577:-|nuORF	ENST00000396049.4_1_2:74383511-74383577:-|nuORF	ENST00000396049.4_1_2:74383511-74383577:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.2871398925781	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.017	1	78.964	78.464	79.464	-0.053558								0	0	0	0.31738	1	7894	7894		24.519	0.99649	1				44191	11107	29560	29573	50059	50059					0.06871224728774905
PVSTHVPSF	9	Unmodified	_PVSTHVPSF_					0	0	0		ENST00000467586.5_1_17:74084367-74085867:-|nuORF	ENST00000467586.5_1_17:74084367-74085867:-|nuORF	ENST00000467586.5_1_17:74084367-74085867:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2850036621094	2	485.753267	969.491981	0.16029	7.7859E-05	-1.456	-0.00070725	-1.2957	-0.00062939	485.75294349939855	51.08	0.49665	51.515	51.285	51.781	0.43505					20	11	2	0	0	0	0.20789	1	5091	5091		27.882	0	1	224220			44192	12159	29561	29574	50060	50060					0.006014983804220719
PVSTIPTE	8	Unmodified	_PVSTIPTE_					0	0	0			REV__nc|ENSG00000089639|Q9P107-2|GMIP	REV__nc|ENSG00000089639|Q9P107-2|GMIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.22808837890625	2	422.226551	842.438549	0.33102	0.00013977	3.0407	0.0012839	3.3717	0.0014236	422.227740126127	56.228	1.0937	56.328	55.393	56.487	0.09919					79	43	2	0	0	0	0.85277	1	4742	4742		25.45	0	1	846200	+		44193	16972	29562	29575	50061	50061					0.011027008779024072
PVSTLGLLI	9	Unmodified	_PVSTLGLLI_					0	0	0			REV__ENSG00000172365|ENST00000641342|OR5B2	REV__ENSG00000172365|ENST00000641342|OR5B2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79144287109375	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.7932	1	3180	3180		25.45	0	1	662040	+		44194	21825	29563	29576	50062	50062					0.10984716596760791
PVSTLLVN	8	Unmodified	_PVSTLLVN_					0	0	0			REV__ENST00000489651.5_1_22:20928956-20929091:+|nuORF	REV__ENST00000489651.5_1_22:20928956-20929091:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.75146484375	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.86677	1	7188	7188		27.882	1.0861	1	423780	+		44195	27624	29564	29577	50063	50063					0.06383284011531032
PVSTPTPGVE	10	Unmodified	_PVSTPTPGVE_					0	0	0		ENST00000439504.6_1_11:72535562-72535697:+|nuORF	ENST00000439504.6_1_11:72535562-72535697:+|nuORF	ENST00000439504.6_1_11:72535562-72535697:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7952880859375	2	492.25584	982.497126	-1.3254	-0.00065242	1.2639	0.00062214	-0.06152	-3.0284E-05	492.2564189377999	44.438	0.43365	45.282	44.986	45.419	0.84438					15	10	2	0	0	0	0.37624	1	4083	4083		20.947	0	1	205620			44196	11762	29565	29578	50064	50064					0.005177574523941075
PVSVLFVR	8	Unmodified	_PVSVLFVR_					0	0	0			REV__ENST00000491138.1_1_3:194930341-194930590:-|nuORF	REV__ENST00000491138.1_1_3:194930341-194930590:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7848815917969	2	458.78437	915.554188	-0.25469	-0.00011685	0.29484	0.00013527	0.040144	1.8418E-05	458.7843711176116	54.815	1.2175	55.383	54.816	56.033	0.56836					53	28	3	0	0	0	0.92457	1	5613	5613		47.916	5.4411	1	659350	+		44197	27649	29566	29579	50065	50065					0.09303269519421065
PVSVPVLVS	9	Unmodified	_PVSVPVLVS_					0	0	0		ENST00000595897.5_1_19:42401825-42402293:+|nuORF	ENST00000595897.5_1_19:42401825-42402293:+|nuORF	ENST00000595897.5_1_19:42401825-42402293:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7877502441406	2	448.776211	895.537869	-0.43391	-0.00019473	3.2553	0.0014609	2.8214	0.0012662	448.77754197634573	37.624	1.6262	37.937	37.042	38.669	0.31312					86	40	3	0	0	0	0.20789	1	3147	3147		16.473	4.2663	1	593140			44198	14330	29567	29580	50066	50066					0.08592143562680121
PVSVPVLVS	9	Unmodified	_PVSVPVLVS_					0	0	0		ENST00000595897.5_1_19:42401825-42402293:+|nuORF	ENST00000595897.5_1_19:42401825-42402293:+|nuORF	ENST00000595897.5_1_19:42401825-42402293:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	448.776211	895.537869	0.63402	0.00028453	2.1441	0.00096224	2.7782	0.0012468	448.7770770987777	37.545	1.3978	38.031	37.119	38.516	0.4858	0.046909	-0.00040807	NaN	16.473	86	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	497950			44199	14330	29567	29580							0.08592143562680121
PVTASLLII	9	Unmodified	_PVTASLLII_					0	0	0			REV__ENSG00000204351|ENST00000375394|SKIC2	REV__ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.801025390625	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.7932	1	2956	2956		25.45	6.0902	1	1091400	+		44200	23485	29568	29581	50067	50067					0.11905003113827206
PVTDQQLIEKI	11	Unmodified	_PVTDQQLIEKI_					0	0	0		ENSG00000142621|ENST00000688493|FHAD1;nc|ENSG00000142621|B1AJZ9-4|FHAD1;nc|ENSG00000142621|B1AJZ9|FHAD1;nc|ENSG00000142621|B1AJZ9-3|FHAD1;ENST00000472131.5_1_1:15653545-15656069:+|nuORF;ENST00000459961.1_1_1:15653545-15655159:+|nuORF	ENSG00000142621|ENST00000688493|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.3662109375	2	642.36391	1282.71327	-0.042196	-2.7105E-05	-1.4873	-0.00095538	-1.5295	-0.00098249	642.3635952564791	110.33	1.0043	110.28	110.08	111.09	-0.055077					98	36	3	0	0	0	0.60058	2	12005	12005;12011		44.377	1.5129	1	348750			44201	4576	29569	29582	50068;50069	50068					0.08321893566244398
PVTGTLIYLD	10	Unmodified	_PVTGTLIYLD_					0	0	0			REV__ENSG00000149218|ENST00000278505|ENDOD1	REV__ENSG00000149218|ENST00000278505|ENDOD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.316650390625	2	546.30279	1090.59103	-1.3313	-0.0007273	-0.57573	-0.00031452	-1.907	-0.0010418	546.8056501754861	88.425	0.11919	88.896	88.836	88.955	0.47068					4	2	2	0	0	0	0.37624	1	10451	10451		40.778	27.966	1	48273	+		44202	20154	29570	29583	50070	50070					0.049354765546468116
PVTKIGKHF	9	Unmodified	_PVTKIGKHF_					0	0	0			REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|25|2|sense	REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|25|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	514.3087158203125	2	513.808377	1025.6022	-0.38907	-0.00019991	1.6539	0.00084981	1.2649	0.0006499	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.7932	1	3589	3589		23.042	2.0956	1	1358900	+		44203	29521	29571	29584	50071	50071					0.0904234343945518
PVTKKVKIQGR	11	Unmodified	_PVTKKVKIQGR_					0	0	0		nc|ENSG00000171804|Q6ZQQ6|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;ENSG00000171804|ENST00000447313|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.93878173828125	3	418.60659	1252.79794	-0.53977	-0.00022595	-3.8565	-0.0016144	-4.3963	-0.0018403	418.6048372602651	50.241	1.6129	50.149	48.812	50.425	-0.091793					54	40	2	0	0	0	0.76892	1	3802	3802		17.833	0.36513	1	78750			44204	6711	29572	29585	50072	50072					0.18165308893503607
PVTLAGKLI	9	Unmodified	_PVTLAGKLI_					0	0	0		ENSG00000170745|ENST00000304101|KCNS3	ENSG00000170745|ENST00000304101|KCNS3	ENSG00000170745|ENST00000304101|KCNS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3008728027344	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.76764	1	2054	2054		34.173	5.023	1	1220600			44205	6610	29573	29586	50073	50073					0.1262842283365444
PVTLAGKLI	9	Unmodified	_PVTLAGKLI_					0	0	0		ENSG00000170745|ENST00000304101|KCNS3	ENSG00000170745|ENST00000304101|KCNS3	ENSG00000170745|ENST00000304101|KCNS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3012390136719	2	456.299853	910.585153	0.12298	5.6116E-05	2.7993	0.0012773	2.9223	0.0013334	456.30098509136985	34.994	1.698	34.939	34.615	36.313	-0.055149					136	59	3	0	0	0	0.7932	1	1831	1831		23.042	2.0956	1	657240			44206	6610	29573	29586	50074	50074					0.1262842283365444
PVTLGILGRKR	11	Unmodified	_PVTLGILGRKR_					0	0	0			REV__ENST00000564399.1_1_16:69355005-69355937:+|nuORF	REV__ENST00000564399.1_1_16:69355005-69355937:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	605.3904418945312	2	605.393139	1208.77173	-1.0119	-0.00061261	-4.4795	-0.0027118	-5.4914	-0.0033244	605.3903055636187	44.786	1.0425	44.786	44.46	45.502	0					57	25	3	0	0	0	0.73893	1	3288	3288		24.519	10.382	1	158280	+		44207	28836	29574	29587	50075	50075					0.17569039722025082
PVTLGLLVA	9	Unmodified	_PVTLGLLVA_					0	0	0		ENSG00000254126|ENST00000643224|CD8B2	ENSG00000254126|ENST00000643224|CD8B2	ENSG00000254126|ENST00000643224|CD8B2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7880554199219	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.7932	1	2478	2478		18.324	0.95945	1	12467000			44208	8873	29575	29588	50076	50076					0.11308733942325944
PVTLRWKP	8	Unmodified	_PVTLRWKP_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.8034973144531	2	498.803094	995.591636	0.36192	0.00018053	0.83184	0.00041492	1.1938	0.00059545	498.8033596820182	51.857	1.6149	51.917	51.457	53.072	0.059719					144	50	4	0	0	0	0.82658	1	4178	4178		21.96	0.25755	1	2712200			44209	8464	29576	29589	50077	50077					0.09366360785031702
PVTPKALL	8	Unmodified	_PVTPKALL_					0	0	0		ENSG00000163013|ENST00000520530|FBXO41	ENSG00000163013|ENST00000520530|FBXO41	ENSG00000163013|ENST00000520530|FBXO41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7745361328125	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.87064	1	3339	3339		29.15	0	1	10266000			44210	5757	29577	29590	50078	50078					0.10712464770847419
PVTPLPTL	8	Unmodified	_PVTPLPTL_					0	0	0			REV__ENST00000588439.1_1_19:36398509-36399100:-|nuORF	REV__ENST00000588439.1_1_19:36398509-36399100:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.2602844238281	2	419.257654	836.500755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.938	1	68.901	68.401	69.401	-0.036957								0	0	0	0.29344	1	6669	6669		31.955	0	1		+		44211	29142	29578	29591	50079	50079					0.0759647201689404
PVTPLVPK	8	Unmodified	_PVTPLVPK_					0	0	0			REV__nc|ENSG00000256463|Q9BXA9-3|SALL3	REV__nc|ENSG00000256463|Q9BXA9-3|SALL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.7747497558594	2	425.773471	849.53239	-0.11951	-5.0886E-05	3.5324	0.001504	3.4129	0.0014531	425.7748940405711	39.012	1.3083	38.959	38.379	39.687	-0.052731					144	37	5	0	0	0	0.86288	1	2398	2398		26.796	0	1	13488000	+		44212	23908	29579	29592	50080	50080					0.10160464770854105
PVTPPLTT	8	Unmodified	_PVTPPLTT_					0	0	0			REV__ENST00000369146.7_1_1:149875772-149875931:-|nuORF	REV__ENST00000369146.7_1_1:149875772-149875931:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2373352050781	2	413.239461	824.46437	-0.18778	-7.7597E-05	-2.7175	-0.001123	-2.9053	-0.0012006	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.86288	1	7189	7189		26.796	2.5934	1	1747900	+		44213	25615	29580	29593	50081	50081					0.04511595120175116
PVTPPLTT	8	Unmodified	_PVTPPLTT_					0	0	0			REV__ENST00000369146.7_1_1:149875772-149875931:-|nuORF	REV__ENST00000369146.7_1_1:149875772-149875931:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2373046875	2	413.239461	824.46437	0.52355	0.00021635	-1.497	-0.00061862	-0.97345	-0.00040227	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.86791	1	6939	6939		28.254	0	1	1692300	+		44214	25615	29580	29593	50082	50082					0.04511595120175116
PVTPPLTT	8	Unmodified	_PVTPPLTT_					0	0	0			REV__ENST00000369146.7_1_1:149875772-149875931:-|nuORF	REV__ENST00000369146.7_1_1:149875772-149875931:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.237548828125	2	413.239461	824.46437	-1.5467	-0.00063915	0.5911	0.00024426	-0.95558	-0.00039489	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.884	1	7478	7478		33.516	0	1	1341700	+		44215	25615	29580	29593	50083	50083					0.04511595120175116
PVTRRRDPRRR	11	Unmodified	_PVTRRRDPRRR_					0	0	0			REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	488.9623107910156	3	488.962541	1463.86579	0.73479	0.00035929	-0.98116	-0.00047975	-0.24637	-0.00012047	488.962037830155	16.572	0.58602	16.548	16.396	16.982	-0.024035					71	25	5	0	0	0	0.80373	1	163	163		10.562	0.91575	1	1499000	+		44216	25081	29581	29594	50084	50084					0.15241571596857284
PVTSTYSK	8	Unmodified	_PVTSTYSK_					0	0	0		ENSG00000132356|ENST00000397128|PRKAA1;nc|ENSG00000132356|Q13131-2|PRKAA1;ENST00000513152.1_1_5:40764586-40764871:-|nuORF	ENSG00000132356|ENST00000397128|PRKAA1	ENSG00000132356|ENST00000397128|PRKAA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78826904296875	2	441.732	881.449448	-0.48472	-0.00021412	-3.6925	-0.0016311	-4.1772	-0.0018452	441.7303768735069	37.905	0.30144	38.218	38.127	38.429	0.31312					13	7	2	0	0	0	0.4196	1	3091	3091		38.806	12.01	1	212400			44217	3785	29582	29595	50085	50085					0.003981032521892303
PVVAVEPPLAK	11	Unmodified	_PVVAVEPPLAK_					0	0	0		nc|ENSG00000160401|Q5JU67-2|CFAP157;ENSG00000160401|ENST00000373295|CFAP157	nc|ENSG00000160401|Q5JU67-2|CFAP157	nc|ENSG00000160401|Q5JU67-2|CFAP157	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3408813476562	2	560.342249	1118.66995	-1.1289	-0.00063255	-2.4697	-0.0013839	-3.5985	-0.0020164	560.3407299796369	89.624	3.285	89.693	87.185	90.47	0.068703					185	76	4	0	0	0	0.70737	2	9125	9125;9185		30.318	4.7437	1	1038600			44218	5585	29583	29596	50086;50087	50086					0.11535748579603933
PVVFAFLF	8	Unmodified	_PVVFAFLF_					0	0	0			REV__ENSG00000116329|ENST00000234961|OPRD1	REV__ENSG00000116329|ENST00000234961|OPRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.2683410644531	2	470.270564	938.526576	-0.5952	-0.00027991	-3.5725	-0.00168	-4.1677	-0.0019599	470.26875072135346	74.151	2.0983	74.542	73.933	76.031	0.3911					119	51	3	0	0	0	0.91333	1	8279	8279		43.626	3.0534	1	1416400	+		44219	18197	29584	29597	50088	50088					0.0548536625918814
PVVGLVVE	8	Unmodified	_PVVGLVVE_					0	0	0		ENST00000483186.1_1_9:77435204-77442805:-|nuORF;nc|ENSG00000119121|Q9BX84-6|TRPM6;nc|ENSG00000119121|Q9BX84-5|TRPM6;nc|ENSG00000119121|Q9BX84-4|TRPM6;nc|ENSG00000119121|Q9BX84-3|TRPM6;nc|ENSG00000119121|Q9BX84-2|TRPM6;ENSG00000119121|ENST00000360774|TRPM6	ENST00000483186.1_1_9:77435204-77442805:-|nuORF	ENST00000483186.1_1_9:77435204-77442805:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24847412109375	2	406.249829	810.485105	0.62319	0.00025317	-3.6411	-0.0014792	-3.0179	-0.001226	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.86791	1	8809	8809		28.254	2.8041	1	38001000			44220	3054	29585	29598	50089	50089					0.07228185499855044
PVVGNPPVLI	10	Unmodified	_PVVGNPPVLI_					0	0	0			REV__ENSG00000173166|ENST00000319170|RAPH1	REV__ENSG00000173166|ENST00000319170|RAPH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8139953613281	2	502.810585	1003.60662	2.3403	0.0011767	3.7237	0.0018723	6.064	0.003049	502.8125095454433	97.334	3.7238	97.279	96.672	100.4	-0.055542					261	86	6	0	0	0	0.53935	3	10511	10438;10486;10511		53.351	1.9636	1	22474000	+		44221	21895	29586	29599	50090;50091;50092	50092					0.10495807862366746
PVVIKPNRV	9	Unmodified	_PVVIKPNRV_					0	0	0			REV__ENSG00000164900|ENST00000297537|GBX1	REV__ENSG00000164900|ENST00000297537|GBX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.32672119140625	2	511.329476	1020.6444	-0.33604	-0.00017183	-4.3544	-0.0022265	-4.6904	-0.0023984	511.32714059375644	97.081	2.0161	97.312	96.825	98.841	0.23103					133	46	4	0	0	0	0.7932	1	10104	10104		25.45	1.2474	1	3439200	+		44222	21128	29587	29600	50093	50093					0.13490318847846083
PVVILKKIF	9	Unmodified	_PVVILKKIF_					0	0	0		ENST00000403050.7_1_7:11014557-11022082:+|nuORF	ENST00000403050.7_1_7:11014557-11022082:+|nuORF	ENST00000403050.7_1_7:11014557-11022082:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.8601684570312	2	528.862621	1055.71069	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.92	1	114.92	114.42	115.42	0								0	0	0	0.36216	1	11833	11833		8.8223	0	1				44223	11248	29588	29601	50094	50094					0.1850613468989195
PVVKVFYQF	9	Unmodified	_PVVKVFYQF_					0	0	0			REV__ENSG00000125991|ENST00000348547|ERGIC3	REV__ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.813720703125	2	563.81841	1125.62227	0.44054	0.00024839	-3.1496	-0.0017758	-2.7091	-0.0015274	563.8167106325166	53.732	0.9845	53.814	53.413	54.398	0.081524					36	24	2	0	0	0	0.76996	1	4396	4396		33.516	3.0119	1	160630	+		44224	18688	29589	29602	50095	50095					0.06448094379425129
PVVLDKKL	8	Unmodified	_PVVLDKKL_					0	0	0			REV__ENSG00000282815|ENST00000695840|TEX13C	REV__ENSG00000282815|ENST00000695840|TEX13C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.301025390625	2	456.299853	910.585153	-0.84354	-0.00038491	3.2342	0.0014758	2.3906	0.0010908	456.30117331551685	46.601	1.8723	46.572	45.714	47.586	-0.028778					105	48	3	0	0	0	0.82464	1	3840	3840		21.702	0.7554	1	332630	+		44225	24051	29590	29603	50096	50096					0.1262842283365444
PVVLGLDP	8	Unmodified	_PVVLGLDP_					0	0	0		ENSG00000206562|ENST00000383790|METTL6	ENSG00000206562|ENST00000383790|METTL6	ENSG00000206562|ENST00000383790|METTL6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2180480957031	2	405.242004	808.469455	-1.8195	-0.00073734	-1.4087	-0.00057086	-3.2282	-0.0013082	405.24145167935177	85.219	0.98435	85.404	85.101	86.085	0.18522					36	22	2	0	0	0	0.4196	1	8372	8372		4.6817	0	1	176030			44226	8563	29591	29604	50097	50097					0.057558989827953155
PVVLLIAGS	9	Unmodified	_PVVLLIAGS_					0	0	0			REV__ENST00000486433.5_1_12:56865273-56869736:-|nuORF	REV__ENST00000486433.5_1_12:56865273-56869736:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77911376953125	2	434.778754	867.542954	-0.89312	-0.00038831	3.6526	0.0015881	2.7595	0.0011998	434.7802679041939	61.693	0.95562	61.709	61.315	62.27	0.015724					65	41	2	0	0	0	0.7932	1	5369	5369		25.45	4.9683	1	303610	+		44227	19219	29592	29605	50098	50098					0.10388447425293634
PVVLLSVSL	9	Unmodified	_PVVLLSVSL_					0	0	0		ENST00000429927.6_2_4:76555328-76555460:-|nuORF	ENST00000429927.6_2_4:76555328-76555460:-|nuORF	ENST00000429927.6_2_4:76555328-76555460:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8005676269531	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	2994	2994		12.959	0.75233	1	942760			44228	11617	29593	29606	50099	50099					0.11905003113804469
PVVLPLLLL	9	Unmodified	_PVVLPLLLL_					0	0	0		nc|ENSG00000113273|P15848-2|ARSB;ENSG00000113273|ENST00000264914|ARSB	nc|ENSG00000113273|P15848-2|ARSB	nc|ENSG00000113273|P15848-2|ARSB	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	488.841552734375	2	488.843897	975.67324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.874	1	74.92	74.42	75.42	0.045959								0	0	0	0.32542	1	7175	7175		21.702	7.0382	1				44229	2711	29594	29607	50100	50100					0.18443043424292682
PVVMVSKAV	9	Unmodified	_PVVMVSKAV_					0	0	0		ENSG00000212126|ENST00000506868|TAS2R50	ENSG00000212126|ENST00000506868|TAS2R50	ENSG00000212126|ENST00000506868|TAS2R50	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.2801208496094	2	465.278063	928.541574	0.33843	0.00015746	3.9044	0.0018166	4.2428	0.0019741	465.2797412586998	88.673	1.4777	89.122	88.674	90.152	0.44893					74	35	3	0	0	0	0.78536	1	10450	10450		29.15	7.1897	1	982940			44230	8569	29595	29608	50101	50101					0.07444490064881393
PVVNIKGF	8	Unmodified	_PVVNIKGF_					0	0	0			REV__ENSG00000134697|ENST00000373062|GNL2	REV__ENSG00000134697|ENST00000373062|GNL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2644348144531	2	437.263271	872.511988	1.7902	0.0007828	4.1025	0.0017939	5.8928	0.0025767	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.86288	1	837	837		26.796	0	1	738160	+		44231	19158	29596	29609	50102	50102					0.0706329411104889
PVVPPTLI	8	Unmodified	_PVVPPTLI_					0	0	0			REV__ENSG00000275023|ENST00000621332|MLLT6	REV__ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2895812988281	2	418.268022	834.521491	0.48025	0.00020087	-0.87784	-0.00036717	-0.39759	-0.0001663	418.26752764088513	72.632	0.46223	72.763	72.521	72.984	0.13063					20	16	2	0	0	0	0.4196	1	6656	6656		8.8223	0.59103	1	60059	+		44232	24007	29597	29610	50103	50103					0.09761062396580655
PVVPVHLDTTI	11	Unmodified	_PVVPVHLDTTI_					0	0	0		ENSG00000169397|ENST00000304639|RNASE3	ENSG00000169397|ENST00000304639|RNASE3	ENSG00000169397|ENST00000304639|RNASE3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	595.8403930664062	2	595.842613	1189.67067	-0.25686	-0.00015305	0.21365	0.0001273	-0.04321	-2.5746E-05	595.8426994790095	67.475	0.72222	68.023	67.729	68.451	0.54819					38	16	3	0	0	0	0.63176	1	7415	7415		40.778	4.3314	1	451780			44233	6493	29598	29611	50104	50104					0.08342543228650356
PVVPVHLDTTI	11	Unmodified	_PVVPVHLDTTI_					0	0	0		ENSG00000169397|ENST00000304639|RNASE3	ENSG00000169397|ENST00000304639|RNASE3	ENSG00000169397|ENST00000304639|RNASE3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	595.842613	1189.67067	0.83145	0.00049542	-0.47803	-0.00028483	0.35342	0.00021059	595.8419255459087	67.663	0.65135	68.049	67.707	68.358	0.38515	0.012824	-0.00027637	NaN	40.778	41	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	326350			44234	6493	29598	29611							0.08342543228650356
PVVRGSFLKM	10	Unmodified	_PVVRGSFLKM_					0	0	0			REV__ENSG00000174460|ENST00000310164|ZCCHC12	REV__ENSG00000174460|ENST00000310164|ZCCHC12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3309936523438	2	567.328619	1132.64269	-0.54401	-0.00030863	3.1144	0.0017669	2.5704	0.0014583	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.88541	1	8941	8941		11.511	1.2458	1	4477200	+		44235	21994	29599	29612	50105	50105					0.0816694176760393
PVVRKSAFA	9	Unmodified	_PVVRKSAFA_					0	0	0			REV__nc|ENSG00000165891|Q96AV8-2|E2F7	REV__nc|ENSG00000165891|Q96AV8-2|E2F7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79058837890625	2	487.792727	973.5709	-1.4525	-0.00070854	-3.1625	-0.0015427	-4.6151	-0.0022512	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.78536	1	7856	7856		29.15	1.2673	1	503530	+		44236	21230	29600	29613	50106	50106					0.08305770405377189
PVVSFRLV	8	Unmodified	_PVVSFRLV_					0	0	0		nc|ENSG00000101811|P33240-2|CSTF2;ENSG00000101811|ENST00000372972|CSTF2	nc|ENSG00000101811|P33240-2|CSTF2	nc|ENSG00000101811|P33240-2|CSTF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7846984863281	2	458.78437	915.554188	-0.22076	-0.00010128	0.36852	0.00016907	0.14776	6.7792E-05	458.78431341419895	55.03	0.9222	55.431	55.027	55.949	0.40101					48	21	3	0	0	0	0.87479	1	5618	5618		30.504	0	1	557910			44237	1960	29601	29614	50107	50107					0.09303269519421065
PVVSRGFLAS	10	Unmodified	_PVVSRGFLAS_					0	0	0		ENST00000471787.1_1_2:215674137-215674392:-|nuORF;ENST00000479904.1_1_2:215661783-215674374:-|nuORF	ENST00000471787.1_1_2:215674137-215674392:-|nuORF	ENST00000471787.1_1_2:215674137-215674392:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7935791015625	2	516.795466	1031.57638	-0.047699	-2.465E-05	-4.0302	-0.0020828	-4.0779	-0.0021075	516.793282030647	86.386	2.8071	86.453	84.68	87.487	0.067436					129	64	3	0	0	0	0.82886	1	8719	8719		37.812	0.65241	1	264930			44238	12249	29602	29615	50108	50108					0.06185449197187154
PVVYGVVDLY	10	Unmodified	_PVVYGVVDLY_					0	0	0		nc|ENSG00000215041|Q96JN8-2|NEURL4;ENSG00000215041|ENST00000399464|NEURL4	nc|ENSG00000215041|Q96JN8-2|NEURL4	nc|ENSG00000215041|Q96JN8-2|NEURL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.3052368164062	2	562.305332	1122.59611	0.035051	1.9709E-05	0.28553	0.00016056	0.32058	0.00018026	562.305399043402	84.25	1.2874	84.686	84.172	85.46	0.43538					98	31	5	0	0	0	0.2613	1	9770	9770		76.847	11.381	1	6203300			44239	8645	29603	29616	50109	50109					0.03971780417282389
PVWLCPRL	8	Unmodified	_PVWLCPRL_					0	0	0			REV__ENST00000342412.10_1_20:61869925-61870532:+|nuORF	REV__ENST00000342412.10_1_20:61869925-61870532:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.2788391113281	2	492.278398	982.542243	-1.2168	-0.00059902	4.0857	0.0020113	2.8689	0.0014123	492.280280433145	26.498	0.59713	26.465	26.1	26.697	-0.032125					18	12	2	0	0	0	0.87807	1	1121	1121		31.579	4.7828	1	40689	+		44240	25274	29604	29617	50110	50110					0.05027329504582667
PWAARVPAENL	11	Unmodified	_PWAARVPAENL_					0	0	0		ENST00000485738.5_1_20:13765717-13782219:+|nuORF;nc|ENSG00000101247|Q5TEU4-2|NDUFAF5;ENSG00000101247|ENST00000378106|NDUFAF5	ENST00000485738.5_1_20:13765717-13782219:+|nuORF	ENST00000485738.5_1_20:13765717-13782219:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.32568359375	2	612.330205	1222.64586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.751	1	56.856	56.356	57.356	0.1055								0	0	0	0.56276	1	4789	4789		27.882	2.3082	1				44241	1920	29605	29618	50111	50111					0.04343908145938258
PWAGIGRLI	9	Unmodified	_PWAGIGRLI_					0	0	0		ENST00000498029.1_1_X:153648339-153649340:+|nuORF	ENST00000498029.1_1_X:153648339-153649340:+|nuORF	ENST00000498029.1_1_X:153648339-153649340:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7957458496094	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.7932	1	4645	4645		25.45	4.5032	1	1898900			44242	12819	29606	29619	50112	50112					0.08446074267999393
PWAKLALRP	9	Unmodified	_PWAKLALRP_					0	0	0			REV__ENST00000399541.6_1_17:6888782-6915571:-|nuORF	REV__ENST00000399541.6_1_17:6888782-6915571:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3225708007812	2	526.324194	1050.63383	-0.93594	-0.00049261	2.1786	0.0011466	1.2426	0.00065403	526.3251692142991	71.452	0.88377	71.528	70.921	71.805	0.076225					58	42	2	0	0	0	0.7932	1	6506	6506		24.203	0	1	116590	+		44243	26230	29607	29620	50113	50113					0.11054336193410563
PWALLQLR	8	Unmodified	_PWALLQLR_					0	0	0			REV__ENST00000585609.1_1_19:11363367-11373116:-|nuORF	REV__ENST00000585609.1_1_19:11363367-11373116:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.8039245605469	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.94132	1	4233	4233		54.765	4.7401	1	2538600	+		44244	29093	29608	29621	50114	50114					0.09366360785020333
PWDKFSDLRLE	11	Unmodified	_PWDKFSDLRLE_					0	0	0			REV__ENST00000511830.2_1_5:69390488-69422514:-|nuORF	REV__ENST00000511830.2_1_5:69390488-69422514:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.24072265625	3	469.241865	1404.70376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.546	1	74.632	74.132	75.132	0.085907								0	0	0	0.56276	1	6870	6870		37.6	13.368	1		+		44245	23864	29609	29622	50115	50115					0.017601252806798584
PWEEVMCFV	9	Unmodified	_PWEEVMCFV_					0	0	0		ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5;ENST00000407916.2_1_7:55002433-55002823:+|nuORF	ENSG00000100852|ENST00000345122|ARHGAP5	ENSG00000100852|ENST00000345122|ARHGAP5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.8390502929688	2	570.248646	1138.48274	1.5078	0.00085983	-2.9769	-0.0016976	-1.4691	-0.00083774	570.2466504231668	50.367	0.3223	51.168	50.971	51.293	0.80175					9	7	2	0	0	0	0.20789	1	4989	4989		52.299	7.922	1	108540			44246	1876	29610	29623	50116	50116					-0.0809635429179707
PWERSILDAL	10	Unmodified	_PWERSILDAL_					0	0	0			REV__nc|ENSG00000160505|Q96MN2-2|NLRP4	REV__nc|ENSG00000160505|Q96MN2-2|NLRP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.3230590820312	2	600.324588	1198.63462	-0.18991	-0.00011401	-0.93114	-0.00055898	-1.121	-0.00067299	600.3238493032328	110.54	1.5294	110.54	110.28	111.81	0					121	48	3	0	0	0	0.86348	1	11583	11583		31.53	1.2121	1	894450	+		44247	20722	29611	29624	50117	50117					0.04325086051812832
PWFREFWEQRF	11	Unmodified	_PWFREFWEQRF_					0	0	0		ENSG00000164082|ENST00000395052|GRM2	ENSG00000164082|ENST00000395052|GRM2	ENSG00000164082|ENST00000395052|GRM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7853088378906	4	407.700572	1626.77318	1.3156	0.00053638	-2.1453	-0.00087462	-0.82964	-0.00033825	407.9505709300569	33.133	0.21232	33.302	33.187	33.399	0.16971					6	4	2	0	0	0	0.18304	1	2355	2355		3.4087	3.0965	1	82319			44248	5914	29612	29625	50118	50118					-0.015133709798647033
PWGALPPRP	9	Unmodified	_PWGALPPRP_					0	0	0		nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B	nc|ENSG00000185033|Q9NPR2-2|SEMA4B	nc|ENSG00000185033|Q9NPR2-2|SEMA4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7787780761719	2	495.779619	989.544686	-0.29638	-0.00014694	-0.61659	-0.00030569	-0.91296	-0.00045263	495.77898062443245	77.704	0.61508	78.272	77.968	78.583	0.56836					31	14	3	0	0	0	0.7932	1	8893	8893		25.45	2.4077	1	783610			44249	7671	29613	29626	50119	50119					0.04949501233886622
PWGGRLLPV	9	Unmodified	_PWGGRLLPV_					0	0	0			REV__ENST00000424611.5_1_15:20644728-20658919:-|nuORF	REV__ENST00000424611.5_1_15:20644728-20658919:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.7955017089844	2	497.795269	993.575986	-1.5279	-0.00076056	2.6004	0.0012945	1.0726	0.00053392	497.79634722185193	48.476	0.80991	48.476	47.85	48.66	0					53	20	3	0	0	0	0.7932	2	3728	3728;3740		26.796	5.0938	1	518630	+		44250	26521	29614	29627	50120;50121	50120					0.07894074267983342
PWGGRLLPV	9	Unmodified	_PWGGRLLPV_					0	0	0			REV__ENST00000424611.5_1_15:20644728-20658919:-|nuORF	REV__ENST00000424611.5_1_15:20644728-20658919:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.7955322265625	2	497.795269	993.575986	-1.2593	-0.00062688	2.6686	0.0013284	1.4093	0.00070156	497.79616758279207	48.708	1.9058	48.709	47.99	49.896	0.00017166					121	43	4	0	0	0	0.7932	1	4027	4027		26.796	2.5934	1	500820	+		44251	26521	29614	29627	50122	50122					0.07894074267983342
PWGGRLLPV	9	Unmodified	_PWGGRLLPV_					0	0	0			REV__ENST00000424611.5_1_15:20644728-20658919:-|nuORF	REV__ENST00000424611.5_1_15:20644728-20658919:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.7952880859375	2	497.795269	993.575986	-0.62564	-0.00031144	1.9566	0.00097397	1.3309	0.00066253	497.7959662701911	48.367	0.7753	48.389	47.898	48.674	0.02227					49	20	3	0	0	0	0.7932	2	3678	3667;3678		26.796	5.0938	1	392340	+		44252	26521	29614	29627	50123;50124	50124					0.07894074267983342
PWGGSLRA	8	Unmodified	_PWGGSLRA_					0	0	0		ENST00000354700.9_1_1:1227787-1227973:-|nuORF	ENST00000354700.9_1_1:1227787-1227973:-|nuORF	ENST00000354700.9_1_1:1227787-1227973:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2288513183594	2	422.22722	842.439886	0.40511	0.00017105	1.6054	0.00067786	2.0105	0.00084891	422.2277865836404	64.332	1.1229	64.456	64.031	65.154	0.12397					101	41	4	0	0	0	0.84341	1	5706	5706		24.203	1.1603	1	502100			44253	10340	29615	29628	50125	50125					0.012363797573243573
PWGLGVPIR	9	Unmodified	_PWGLGVPIR_					0	0	0		ENST00000357573.10_2_16:28915757-28916156:-|nuORF	ENST00000357573.10_2_16:28915757-28916156:-|nuORF	ENST00000357573.10_2_16:28915757-28916156:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.7952880859375	2	497.795269	993.575986	-1.5169	-0.00075511	2.6411	0.0013147	1.1242	0.00055963	497.7963799927103	49.017	1.345	49.017	48.626	49.971	0					75	31	3	0	0	0	0.7932	1	3826	3826		25.45	3.7478	1	491380			44254	10389	29616	29629	50126	50126					0.07894074267983342
PWGLIAKAR	9	Unmodified	_PWGLIAKAR_					0	0	0		ENST00000533478.5_1_16:81157348-81174942:-|nuORF	ENST00000533478.5_1_16:81157348-81174942:-|nuORF	ENST00000533478.5_1_16:81157348-81174942:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.3099365234375	2	506.308544	1010.60253	0.1012	5.1237E-05	0.53119	0.00026894	0.63238	0.00032018	506.81022509860003	49.29	2.3799	49.287	48.52	50.9	-0.0030327					95	61	3	0	0	0	0.78058	1	4166	4166		30.504	3.7075	1	213010			44255	13395	29617	29630	50127	50127					0.09765763159305152
PWGLINLR	8	Unmodified	_PWGLINLR_					0	0	0		ENSG00000154237|ENST00000388948|LRRK1	ENSG00000154237|ENST00000388948|LRRK1	ENSG00000154237|ENST00000388948|LRRK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.28717041015625	2	484.787444	967.560336	-2.1932	-0.0010632	2.0475	0.0009926	-0.14566	-7.0612E-05	484.78805875753903	41.198	1.3446	41.59	41.379	42.723	0.39209					59	35	3	0	0	0	0.9159	1	3593	3593		44.531	2.0566	1	3024000			44256	5264	29618	29631	50128	50128					0.07525787750921609
PWHLLMLN	8	Unmodified	_PWHLLMLN_					0	0	0			REV__ENSG00000157999|ENST00000409061|ANKRD61	REV__ENSG00000157999|ENST00000409061|ANKRD61	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.7326354980469	2	512.275855	1022.53716	1.1565	0.00059243	1.2335	0.0006319	2.39	0.0012243	512.276501214572	51.318	0.70105	52.07	51.737	52.438	0.75174					27	16	2	0	0	0	0.4196	1	5075	5075		21.702	0	1	307000	+		44257	20577	29619	29632	50129	50129					0.026790256419531033
PWHSLLNS	8	Unmodified	_PWHSLLNS_					0	0	0		ENSG00000166268|ENST00000552032|MYRFL	ENSG00000166268|ENST00000552032|MYRFL	ENSG00000166268|ENST00000552032|MYRFL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2475891113281	2	477.245609	952.476666	0.42784	0.00020419	1.5249	0.00072774	1.9527	0.00093193	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.85277	1	7230	7230		25.45	0.94616	1	2278400			44258	6174	29620	29633	50130	50130					-0.0014736841676494805
PWIEIKIGLLN	11	Unmodified	_PWIEIKIGLLN_					0	0	0			REV__ENST00000609706.1_1_22:38244637-38244802:-|nuORF	REV__ENST00000609706.1_1_22:38244637-38244802:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3927612304688	2	648.389731	1294.76491	2.6473	0.0017165	1.9919	0.0012915	4.6393	0.0030081	648.3908884221966	106.46	0.85558	106.43	105.94	106.79	-0.034134					69	19	4	0	0	0	0.70278	1	11757	11757		35.152	7.0705	1	16306000	+		44259	29418	29621	29634	50131	50131					0.12931682050816562
PWIEIKIGLLN	11	Unmodified	_PWIEIKIGLLN_					0	0	0			REV__ENST00000609706.1_1_22:38244637-38244802:-|nuORF	REV__ENST00000609706.1_1_22:38244637-38244802:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3927612304688	2	648.389731	1294.76491	1.8787	0.0012181	2.9514	0.0019136	4.8301	0.0031318	648.3915145457087	107.1	1.2973	107.13	106.67	107.97	0.035622					111	30	4	0	0	0	0.69071	2	11735	11735;11760		30.318	7.7381	1	42934000	+		44260	29418	29621	29634	50132;50133	50132					0.12931682050816562
PWIEIKIGLLN	11	Unmodified	_PWIEIKIGLLN_					0	0	0			REV__ENST00000609706.1_1_22:38244637-38244802:-|nuORF	REV__ENST00000609706.1_1_22:38244637-38244802:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3929443359375	2	648.389731	1294.76491	1.6039	0.00104	3.2401	0.0021008	4.844	0.0031408	648.3917432358439	106.08	2.1363	106.23	104.51	106.65	0.14843					114	53	4	0	0	0	0.70737	1	11352	11352		30.318	3.6248	1	52760000	+		44261	29418	29621	29634	50134	50134					0.12931682050816562
PWIEIKIGLLN	11	Unmodified	_PWIEIKIGLLN_					0	0	0			REV__ENST00000609706.1_1_22:38244637-38244802:-|nuORF	REV__ENST00000609706.1_1_22:38244637-38244802:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3926391601562	2	648.389731	1294.76491	0.94475	0.00061257	3.7814	0.0024518	4.7262	0.0030644	648.3921194247092	106.15	2.119	106.24	104.58	106.7	0.099007					110	52	4	0	0	0	0.7144	2	11380	11322;11380		29.17	1.0886	1	47497000	+		44262	29418	29621	29634	50135;50136	50136					0.12931682050816562
PWIEIKIGLLN	11	Unmodified	_PWIEIKIGLLN_					0	0	0			REV__ENST00000609706.1_1_22:38244637-38244802:-|nuORF	REV__ENST00000609706.1_1_22:38244637-38244802:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3926391601562	2	648.389731	1294.76491	0.94475	0.00061257	4.1927	0.0027185	5.1374	0.0033311	648.3923298671006	107.11	0.98898	107.2	106.69	107.68	0.091255					92	23	4	0	0	0	0.70737	1	11524	11524		30.318	2.2362	1	51640000	+		44263	29418	29621	29634	50137	50137					0.12931682050816562
PWIGYGLLL	9	Unmodified	_PWIGYGLLL_					0	0	0		ENSG00000187048|ENST00000310638|CYP4A11;nc|ENSG00000187048|Q02928-2|CYP4A11	ENSG00000187048|ENST00000310638|CYP4A11	ENSG00000187048|ENST00000310638|CYP4A11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.29931640625	2	516.299853	1030.58515	-0.37711	-0.0001947	-0.60459	-0.00031215	-0.9817	-0.00050685	516.2998075146065	62.799	1.3838	63.187	62.708	64.092	0.38779					58	31	3	0	0	0	0.72098	1	6762	6762		39.021	0	1	306010			44264	7836	29622	29635	50138	50138					0.07108422833653094
PWIKRLLPVI	10	Unmodified	_PWIKRLLPVI_					0	0	0		nc|ENSG00000183605|Q6P4A7-3|SFXN4;nc|ENSG00000183605|Q6P4A7-2|SFXN4;ENSG00000183605|ENST00000355697|SFXN4	nc|ENSG00000183605|Q6P4A7-3|SFXN4	nc|ENSG00000183605|Q6P4A7-3|SFXN4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.7670593261719	3	412.27266	1233.79615	1.2592	0.00051915	0.61267	0.00025259	1.8719	0.00077173	412.27289444465634	36.512	0.99836	36.952	36.786	37.785	0.44043					55	23	3	0	0	0	0.37624	1	2866	2866		22.58	6.0498	1	278220			44265	7545	29623	29636	50139	50139					0.18860299875541386
PWKAPLAE	8	Unmodified	_PWKAPLAE_					0	0	0		nc|ENSG00000069535|P27338-2|MAOB;ENSG00000069535|ENST00000378069|MAOB	nc|ENSG00000069535|P27338-2|MAOB	nc|ENSG00000069535|P27338-2|MAOB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.755859375	2	456.252903	910.491253	-1.6868	-0.0007696	1.5765	0.00071928	-0.1103	-5.0324E-05	456.2528624469303	52.407	1.3098	52.407	51.831	53.141	0					69	34	3	0	0	0	0.86288	1	4274	4274		26.796	7.4361	1	84817			44266	1222	29624	29637	50140	50140					0.032427037313595974
PWKHAKKLSI	10	Unmodified	_PWKHAKKLSI_					0	0	0			REV__L1MA9_dup12488|chr12:104032460-104032879:+|4.706381523448719|0.35838869622059|3.72|63.0|1|1|sense	REV__L1MA9_dup12488|chr12:104032460-104032879:+|4.706381523448719|0.35838869622059|3.72|63.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3649291992188	2	604.369133	1206.72371	-1.2751	-0.00077064	-2.39	-0.0014444	-3.6651	-0.0022151	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.8486	1	12935	12935		18.262	1.7889	1	3346600	+		44267	29509	29625	29638	50141	50141					0.12861965801971564
PWLAPAALR	9	Unmodified	_PWLAPAALR_					0	0	0		nc|ENSG00000020129|Q9UBB6-2|NCDN;ENSG00000020129|ENST00000373243|NCDN	nc|ENSG00000020129|Q9UBB6-2|NCDN	nc|ENSG00000020129|Q9UBB6-2|NCDN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.7950134277344	2	497.795269	993.575986	0.32848	0.00016352	0.8359	0.0004161	1.1644	0.00057962	497.7954109844358	48.391	0.87605	48.429	47.96	48.836	0.037731					54	21	3	0	0	0	0.7932	1	3718	3718		25.45	4.9683	1	407880			44268	842	29626	29639	50142	50142					0.07894074267983342
PWLARLIAS	9	Unmodified	_PWLARLIAS_					0	0	0		nc|ENSG00000141449|Q9C091-4|GREB1L;ENST00000578368.5_1_18:18963479-19048745:+|nuORF;ENST00000584446.5_1_18:18963479-19034595:+|nuORF;ENSG00000141449|ENST00000424526|GREB1L	nc|ENSG00000141449|Q9C091-4|GREB1L	nc|ENSG00000141449|Q9C091-4|GREB1L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8089599609375	2	513.808377	1025.6022	-1.3833	-0.00071076	2.6514	0.0013623	1.2681	0.00065157	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.78058	1	4289	4289		30.504	6.3009	1	1148600			44269	4502	29627	29640	50143	50143					0.0904234343945518
PWLARLIAS	9	Unmodified	_PWLARLIAS_					0	0	0		nc|ENSG00000141449|Q9C091-4|GREB1L;ENST00000578368.5_1_18:18963479-19048745:+|nuORF;ENST00000584446.5_1_18:18963479-19034595:+|nuORF;ENSG00000141449|ENST00000424526|GREB1L	nc|ENSG00000141449|Q9C091-4|GREB1L	nc|ENSG00000141449|Q9C091-4|GREB1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8087768554688	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.76996	1	4582	4582		33.516	3.0119	1	771120			44270	4502	29627	29640	50144	50144					0.0904234343945518
PWLARLIAS	9	Unmodified	_PWLARLIAS_					0	0	0		nc|ENSG00000141449|Q9C091-4|GREB1L;ENST00000578368.5_1_18:18963479-19048745:+|nuORF;ENST00000584446.5_1_18:18963479-19034595:+|nuORF;ENSG00000141449|ENST00000424526|GREB1L	nc|ENSG00000141449|Q9C091-4|GREB1L	nc|ENSG00000141449|Q9C091-4|GREB1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8087158203125	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.78536	1	3819	3819		29.15	0.89528	1	1550000			44271	4502	29627	29640	50145	50145					0.0904234343945518
PWLARLIAS	9	Unmodified	_PWLARLIAS_					0	0	0		nc|ENSG00000141449|Q9C091-4|GREB1L;ENST00000578368.5_1_18:18963479-19048745:+|nuORF;ENST00000584446.5_1_18:18963479-19034595:+|nuORF;ENSG00000141449|ENST00000424526|GREB1L	nc|ENSG00000141449|Q9C091-4|GREB1L	nc|ENSG00000141449|Q9C091-4|GREB1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8092651367188	2	513.808377	1025.6022	-0.30203	-0.00015519	1.5478	0.00079525	1.2457	0.00064007	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.78058	1	4204	4204		30.504	6.3009	1	861580			44272	4502	29627	29640	50146	50146					0.0904234343945518
PWLHRLIRRNP	11	Unmodified	_PWLHRLIRRNP_					0	0	0		ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.626953125	3	486.624866	1456.85277	3.9672	0.0019305	1.53	0.00074454	5.4972	0.0026751	486.625118109721	105.82	0.62193	106	105.69	106.32	0.18647					37	18	3	0	0	0	0.76579	1	12929	12929		18.531	0	1	272160			44273	7004	29628	29641	50147	50147					0.1426174048476696
PWLHRLIRRNP	11	Unmodified	_PWLHRLIRRNP_					0	0	0		ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	486.624866	1456.85277	2.8333	0.0013787	2.0254	0.00098561	4.8587	0.0023643	486.62583546524337	106.33	0.72703	106.29	105.97	106.7	-0.03714	0.21784	-0.0026488	NaN	18.531	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138740			44274	7004	29628	29641							0.1426174048476696
PWLHRLIRRNP	11	Unmodified	_PWLHRLIRRNP_					0	0	0		ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	486.624866	1456.85277	-0.89288	-0.0004345	5.565	0.0027081	4.6721	0.0022736	486.62750737853975	106.07	0.55468	106.11	105.94	106.5	0.03688	0.035448	0.0025185	NaN	18.531	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90692			44275	7004	29628	29641							0.1426174048476696
PWLHRLIRRNP	11	Unmodified	_PWLHRLIRRNP_					0	0	0		ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	486.624866	1456.85277	-0.69533	-0.00033837	5.8069	0.0028258	5.1115	0.0024874	486.6275225375817	105.9	0.63318	106.06	105.81	106.44	0.15924	-0.016716	0.0028717	NaN	18.531	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	333480			44276	7004	29628	29641							0.1426174048476696
PWLHRLIRRNP	11	Unmodified	_PWLHRLIRRNP_					0	0	0		ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	486.624866	1456.85277	0.7899	0.00038438	4.2618	0.0020739	5.0517	0.0024583	486.6266869559536	105.97	0.43387	106.07	105.87	106.31	0.099007	-0.0038678	0.00061611	NaN	18.531	28	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	365050			44277	7004	29628	29641							0.1426174048476696
PWLHRLIRRNP	11	Unmodified	_PWLHRLIRRNP_					0	0	0		ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	486.624866	1456.85277	-1.6585	-0.00080709	6.6678	0.0032447	5.0093	0.0024377	486.6279679510904	106.01	0.39973	106.08	105.88	106.28	0.073112	0.010504	0.0041286	NaN	18.531	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	278040			44278	7004	29628	29641							0.1426174048476696
PWLIGIRGG	9	Unmodified	_PWLIGIRGG_					0	0	0			REV__ENSG00000170927|ENST00000371117|PKHD1	REV__ENSG00000170927|ENST00000371117|PKHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7860107421875	2	484.787444	967.560336	-1.9972	-0.00096823	2.4086	0.0011677	0.41137	0.00019943	484.7880846012334	40.756	1.0376	41.148	40.377	41.415	0.39209					49	28	3	0	0	0	0.76996	1	3513	3513		33.516	0	1	7044500	+		44279	21700	29629	29642	50148	50148					0.07525787750944346
PWLKNLPK	8	Unmodified	_PWLKNLPK_					0	0	0		ENST00000451320.6_1_4:153701211-153750831:+|nuORF	ENST00000451320.6_1_4:153701211-153750831:+|nuORF	ENST00000451320.6_1_4:153701211-153750831:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.3048095703125	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.889	1	52.93	52.43	53.43	0.040592								0	0	0	0.30252	1	4293	4293		19.36	0	1				44280	11900	29630	29643	50149	50149					0.09887244927790562
PWLKRRRTR	9	Unmodified	_PWLKRRRTR_					0	0	0			REV__ENST00000586866.5_2_19:1077961-1079783:+|nuORF	REV__ENST00000586866.5_2_19:1077961-1079783:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.59765625	3	423.59854	1267.77379	0.7341	0.00031097	-2.9076	-0.0012317	-2.1735	-0.00092071	423.59723125055814	105.63	2.8345	105.73	105.02	107.86	0.10765					213	69	5	0	0	0	0.7932	1	11232	11232		16.007	2.4988	1	8035700	+		44281	29116	29631	29644	50150	50150					0.150615132504754
PWLLSRLVVL	10	Unmodified	_PWLLSRLVVL_					0	0	0			REV__ENSG00000172426|ENST00000372163|RSPH9	REV__ENSG00000172426|ENST00000372163|RSPH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3807373046875	2	598.381709	1194.74886	-1.7641	-0.0010556	1.2492	0.00074748	-0.51497	-0.00030815	598.3824318861281	41.194	0.78385	41.828	41.496	42.28	0.6339					56	21	3	0	0	0	0.85694	1	3622	3622		21.96	0	1	4475400	+		44282	21830	29632	29645	50151	50151					0.15928020604565063
PWLLSVPHGAS	11	Unmodified	_PWLLSVPHGAS_					0	0	0			REV__ENST00000565256.1_1_17:75085247-75090336:+|nuORF	REV__ENST00000565256.1_1_17:75085247-75090336:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3533325195312	2	582.314023	1162.61349	0.71908	0.00041873	1.8325	0.0010671	2.5516	0.0014858	582.3157310929627	103.27	0.74099	103.45	103.24	103.98	0.18298					31	18	2	0	0	0	0.17431	1	10920	10920		39.253	6.5023	1	507650	+		44283	28853	29633	29646	50152	50152					0.03869120742956511
PWLPRGGG	8	Unmodified	_PWLPRGGG_					0	0	0		nc|ENSG00000102901|Q96BT3-3|CENPT;ENST00000564128.1_1_16:67866129-67867804:-|nuORF;ENST00000569862.5_1_16:67865986-67867804:-|nuORF	nc|ENSG00000102901|Q96BT3-3|CENPT	nc|ENSG00000102901|Q96BT3-3|CENPT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2268981933594	2	420.229762	838.444972	-1.4714	-0.00061832	-3.1187	-0.0013106	-4.59	-0.0019289	420.22834377301643	76.819	2.0914	76.909	74.945	77.036	0.089363					112	66	2	0	0	0	0.87276	1	7160	7160		29.842	0	1	246920			44284	13882	29634	29647	50153	50153					0.019286836199512436
PWLPTRGG	8	Unmodified	_PWLPTRGG_					0	0	0		ENST00000360900.10_3_16:86565809-86565971:-|nuORF	ENST00000360900.10_3_16:86565809-86565971:-|nuORF	ENST00000360900.10_3_16:86565809-86565971:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2409973144531	2	442.24287	882.471186	0.098186	4.3422E-05	-4.3565	-0.0019266	-4.2583	-0.0018832	442.2407808543281	79.076	2.7507	79.022	77.456	80.207	-0.053558					222	93	4	0	0	0	0.90465	1	7849	7849		40.573	3.4135	1	344800			44285	10460	29635	29648	50154	50154					0.025249527914297687
PWLPVRLLK	9	Unmodified	_PWLPVRLLK_					0	0	0			REV__ENST00000565162.2_1_22:19159276-19159567:+|nuORF	REV__ENST00000565162.2_1_22:19159276-19159567:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	561.86669921875	2	561.363319	1120.71209	-0.54951	-0.00030848	1.3579	0.00076227	0.80838	0.00045379	561.3639017095335	46.054	1.012	46.025	45.497	46.509	-0.028782					47	23	3	0	0	0	0.7932	1	3799	3799		18.324	0	1	192690	+		44286	28850	29636	29649	50155	50155					0.15655768778628953
PWLRALQL	8	Unmodified	_PWLRALQL_					0	0	0		ENSG00000130812|ENST00000253109|ANGPTL6	ENSG00000130812|ENST00000253109|ANGPTL6	ENSG00000130812|ENST00000253109|ANGPTL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8035888671875	2	498.803094	995.591636	-0.601	-0.00029978	1.7229	0.00085937	1.1219	0.00055959	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.88915	1	4593	4593		35.201	1.6851	1	2240900			44287	3688	29637	29650	50156	50156					0.09366360785031702
PWLRIAAS	8	Unmodified	_PWLRIAAS_					0	0	0			REV__nc|ENSG00000168060|Q9UQQ1-6|NAALADL1	REV__nc|ENSG00000168060|Q9UQQ1-6|NAALADL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2633056640625	2	457.266345	912.518136	-1.1625	-0.00053158	-3.3651	-0.0015388	-4.5277	-0.0020703	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.87064	1	8232	8232		29.15	2.3535	1	4732500	+		44288	30010	29638	29651	50157	50157					0.058378123425427475
PWLRPVLN	8	Unmodified	_PWLRPVLN_					0	0	0			REV__ENSG00000213614|ENST00000268097|HEXA	REV__ENSG00000213614|ENST00000268097|HEXA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.79541015625	2	497.795269	993.575986	-1.5169	-0.00075511	2.6411	0.0013147	1.1242	0.00055963	497.7963799927103	49.017	1.345	49.017	48.626	49.971	0					75	31	3	0	0	0	0.86288	2	3794	3794;3817		33.516	2.5934	1	491380	+		44289	23623	29639	29652	50158;50159	50158					0.07894074267983342
PWLRPVLN	8	Unmodified	_PWLRPVLN_					0	0	0			REV__ENSG00000213614|ENST00000268097|HEXA	REV__ENSG00000213614|ENST00000268097|HEXA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.7949523925781	2	497.795269	993.575986	0.10323	5.1388E-05	0.97414	0.00048492	1.0774	0.00053631	497.7955420598114	48.958	1.1928	48.952	48.605	49.798	-0.0056381					56	26	3	0	0	0	0.81548	1	4059	4059		20.482	0	1	455850	+		44290	23623	29639	29652	50160	50160					0.07894074267983342
PWLRPVLN	8	Unmodified	_PWLRPVLN_					0	0	0			REV__ENSG00000213614|ENST00000268097|HEXA	REV__ENSG00000213614|ENST00000268097|HEXA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.7949523925781	2	497.795269	993.575986	-0.23858	-0.00011877	1.4256	0.00070966	1.187	0.00059089	497.79577554464987	49.055	0.99467	48.961	48.599	49.594	-0.093178					54	23	3	0	0	0	0.81548	1	3730	3730		20.482	0.48506	1	401360	+		44291	23623	29639	29652	50161	50161					0.07894074267983342
PWLSKKPR	8	Unmodified	_PWLSKKPR_					0	0	0			REV__ENST00000257836.3_1_11:32851563-32852059:+|nuORF	REV__ENST00000257836.3_1_11:32851563-32852059:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.30841064453125	2	506.308544	1010.60253	0.26704	0.0001352	-0.23093	-0.00011692	0.03611	1.8283E-05	506.30835501628917	44.614	1.9662	44.591	43.729	45.696	-0.023079					64	45	2	0	0	0	0.884	1	3512	3512		33.516	1.9858	1	414870	+		44292	24349	29640	29653	50162	50162					0.0976576315931652
PWLSPLSQPKL	11	Unmodified	_PWLSPLSQPKL_					0	0	0			REV__ENST00000357155.1_1_1:109837903-109840046:-|nuORF	REV__ENST00000357155.1_1_1:109837903-109840046:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5819091796875	3	422.579929	1264.71796	2.2204	0.0009383	2.6436	0.0011171	4.864	0.0020554	422.58094622121547	97.769	3.2395	97.714	96.802	100.04	-0.055542					208	75	4	0	0	0	0.6396	2	10508	10508;10553		39.873	12.229	1	525770	+		44293	25406	29641	29654	50163;50164	50163					0.0961882249964674
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958679199219	2	491.795269	981.575986	-1.6029	-0.00078829	2.358	0.0011597	0.75513	0.00037137	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.7932	1	3388	3388		24.203	5.8783	1	603870	+		44294	26540	29642	29655	50165	50165					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7956237792969	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.77546	2	3655	3655;3664		31.955	4.8428	1	2891800	+		44295	26540	29642	29655	50166;50167	50166					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7959289550781	2	491.795269	981.575986	0.16895	8.3091E-05	0.70742	0.00034791	0.87638	0.000431	491.795491652363	46.653	1.8507	46.639	45.976	47.827	-0.013821					152	52	4	0	0	0	0.72402	1	3834	3834		38.806	10.552	1	2674700	+		44296	26540	29642	29655	50168	50168					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7957458496094	2	491.795269	981.575986	0.09879	4.8585E-05	0.95013	0.00046727	1.0489	0.00051585	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.7932	2	3979	3979;4039		24.203	3.2558	1	1349600	+		44297	26540	29642	29655	50169;50170	50169					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7955322265625	2	491.795269	981.575986	-0.99617	-0.00048991	0.64691	0.00031815	-0.34926	-0.00017177	491.7955324242566	43.442	1.556	43.406	42.885	44.441	-0.035816					74	36	3	0	0	0	0.76996	1	3385	3385		33.516	3.0119	1	171190	+		44298	26540	29642	29655	50171	50171					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7955627441406	2	491.795269	981.575986	-0.86128	-0.00042357	1.3952	0.00068615	0.53392	0.00026258	491.79583711541846	45.285	1.262	45.254	44.708	45.97	-0.031067					74	28	3	0	0	0	0.7932	1	3713	3713		26.796	1.3459	1	480390	+		44299	26540	29642	29655	50172	50172					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7962341308594	2	491.795269	981.575986	-0.75954	-0.00037354	1.5722	0.0007732	0.81265	0.00039966	491.7959244094971	46.601	1.9125	46.572	45.843	47.756	-0.028782					158	52	4	0	0	0	0.67235	3	3945	3906;3945;3991		42.474	7.4361	1	3015000	+		44300	26540	29642	29655	50173;50174;50175	50174					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7958679199219	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.76402	1	4686	4686		35.201	1.6851	1	792830	+		44301	26540	29642	29655	50176	50176					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7956848144531	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.7932	1	4552	4552		19.36	1.995	1	703950	+		44302	26540	29642	29655	50177	50177					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7955627441406	2	491.795269	981.575986	-2.0878	-0.0010268	2.9764	0.0014638	0.88855	0.00043698	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.7932	1	5042	5042		25.45	4.9683	1	1484300	+		44303	26540	29642	29655	50178	50178					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7959289550781	2	491.795269	981.575986	-0.72436	-0.00035624	0.93415	0.00045941	0.20979	0.00010317	491.79558867203156	43.471	1.2464	43.477	42.933	44.179	0.0057487					50	30	2	0	0	0	0.7932	1	3022	3022		25.45	1.2474	1	198180	+		44304	26540	29642	29655	50179	50179					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7951965332031	2	491.795269	981.575986	-0.72034	-0.00035426	1.4985	0.00073695	0.77816	0.00038269	491.7958614454625	45.142	1.3703	45.154	44.592	45.963	0.012058					80	34	3	0	0	0	0.7932	1	3202	3202		25.45	2.4135	1	396090	+		44305	26540	29642	29655	50180	50180					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.795654296875	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.7932	1	3456	3456		24.203	3.7209	1	3201400	+		44306	26540	29642	29655	50181	50181					0.08446074267976655
PWLVAGLRA	9	Unmodified	_PWLVAGLRA_					0	0	0			REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	REV__ENST00000425967.7_1_8:38270519-38270621:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79595947265625	2	491.795269	981.575986	-0.17405	-8.5598E-05	1.0809	0.00053159	0.90686	0.00044599	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.7932	1	3554	3554		24.203	2.5004	1	2994900	+		44307	26540	29642	29655	50182	50182					0.08446074267976655
PWLWMPKT	8	Unmodified	_PWLWMPKT_					0	0	0		ENST00000517712.5_1_8:141669593-141669659:-|nuORF	ENST00000517712.5_1_8:141669593-141669659:-|nuORF	ENST00000517712.5_1_8:141669593-141669659:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2793579101562	2	529.778231	1057.54191	0.50311	0.00026654	1.8913	0.001002	2.3944	0.0012685	530.2808421307274	64.434	0.8265	64.558	63.973	64.799	0.12397					49	31	2	0	0	0	0.91977	1	5690	5690		45.952	8.9235	1	131080			44308	13106	29643	29656	50183	50183					0.015439097847092853
PWMLLFKP	8	Unmodified	_PWMLLFKP_					0	0	0		nc|ENSG00000033627|Q93050-1|ATP6V0A1;ENSG00000033627|ENST00000343619|ATP6V0A1;nc|ENSG00000033627|Q93050-3|ATP6V0A1	nc|ENSG00000033627|Q93050-1|ATP6V0A1	nc|ENSG00000033627|Q93050-1|ATP6V0A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3145141601562	2	516.290974	1030.56739	-0.047236	-2.4388E-05	-1.7174	-0.00088668	-1.7646	-0.00091106	516.2907633315937	100.2	0.22157	100.25	100.18	100.4	0.041107					6	4	2	0	0	0	0.4196	1	10676	10676		28.254	0	1	48189			44309	893	29644	29657	50184	50184					0.05333384307164124
PWMRRWWRSRP	11	Unmodified	_PWMRRWWRSRP_					0	0	0		chr4:1985864-1985994|25|10.44|0.28|5.24|-|0|NELFA,None|2	chr4:1985864-1985994|25|10.44|0.28|5.24|-|0|NELFA,None|2	chr4:1985864-1985994|25|10.44|0.28|5.24|-|0|NELFA,None|2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.9246826171875	3	538.617606	1612.83099	0.93769	0.00050506	-0.66599	-0.00035871	0.2717	0.00014634	538.9521301416423	18.748	0.11717	18.822	18.75	18.868	0.073465					5	3	2	0	0	0	0.18386	1	317	317		1.2319	0	1	10297			44310	419	29645	29658	50185	50185					0.049086124645555174
PWNEVKKAR	9	Unmodified	_PWNEVKKAR_					0	0	0		ENSG00000158077|ENST00000299481|NLRP14	ENSG00000158077|ENST00000299481|NLRP14	ENSG00000158077|ENST00000299481|NLRP14	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.3189086914062	2	564.31964	1126.62473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.328	1	57.328	56.828	57.828	0								0	0	0	0.30778	1	4925	4925		27.882	1.1893	1				44311	5460	29646	29659	50186	50186					0.06647942837071241
PWPARPALVL	10	Unmodified	_PWPARPALVL_					0	0	0		ENSG00000166189|ENST00000299238|HPS6	ENSG00000166189|ENST00000299238|HPS6	ENSG00000166189|ENST00000299238|HPS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.34130859375	2	560.337301	1118.66005	3.1454	0.0017625	2.2738	0.0012741	5.4192	0.0030366	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.85939	1	13245	13245		23.042	1.0826	1	151040			44312	6168	29647	29660	50187	50187					0.10546605364879724
PWPFLAPVLLL	11	Unmodified	_PWPFLAPVLLL_					0	0	0		ENST00000379938.6_3_6:7250695-7251052:+|nuORF	ENST00000379938.6_3_6:7250695-7251052:+|nuORF	ENST00000379938.6_3_6:7250695-7251052:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5924377441406	3	422.593399	1264.75837	-1.8214	-0.00076972	0.093708	3.96E-05	-1.7277	-0.00073012	422.5933529014654	49.394	1.9735	49.419	48.567	50.541	0.025574					182	52	4	0	0	0	0.72739	1	3867	3867		27.047	2.8155	1	2033600			44313	10905	29648	29661	50188	50188					0.13657788890100164
PWPNCEAMDL	10	Unmodified	_PWPNCEAMDL_					0	0	0			REV__nc|ENSG00000084693|Q8NDL9-3|AGBL5	REV__nc|ENSG00000084693|Q8NDL9-3|AGBL5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	588.24755859375	2	588.246634	1174.47872	0.72895	0.0004288	2.1451	0.0012619	2.8741	0.0016907	588.2477687674693	58.587	0.40939	58.674	58.499	58.909	0.087002					32	21	2	0	0	0	0.86589	1	4986	4986		29.15	1.2673	1	93806	+		44314	16879	29649	29662	50189	50189					-0.1015444378549546
PWPSPPSSY	9	Unmodified	_PWPSPPSSY_					0	0	0		nc|ENSG00000088305|Q9UBC3-7|DNMT3B;nc|ENSG00000088305|Q9UBC3-4|DNMT3B;nc|ENSG00000088305|Q9UBC3-8|DNMT3B;nc|ENSG00000088305|Q9UBC3-3|DNMT3B;nc|ENSG00000088305|Q9UBC3-5|DNMT3B;nc|ENSG00000088305|Q9UBC3-2|DNMT3B;nc|ENSG00000088305|Q9UBC3-6|DNMT3B;ENSG00000088305|ENST00000328111|DNMT3B	nc|ENSG00000088305|Q9UBC3-7|DNMT3B	nc|ENSG00000088305|Q9UBC3-7|DNMT3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8052978515625	2	509.23745	1016.46035	0.99605	0.00050723	-1.7945	-0.00091382	-0.79844	-0.00040659	509.23665510426025	89.463	0.42026	89.914	89.692	90.113	0.45058					19	9	3	0	0	0	0.20789	1	10553	10553		33.516	3.674	1	224930			44315	1588	29650	29663	50190	50190					-0.04722494373527297
PWPSVKLR	8	Unmodified	_PWPSVKLR_					0	0	0			REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7953186035156	2	491.795269	981.575986	-0.035071	-1.7248E-05	1.1757	0.00057819	1.1406	0.00056094	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.87064	1	5017	5017		29.15	3.6994	1	1625300	+		44316	24649	29651	29664	50191	50191					0.08446074267988024
PWPSVKLR	8	Unmodified	_PWPSVKLR_					0	0	0			REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7954406738281	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.86677	1	3761	3761		27.882	3.6795	1	1346800	+		44317	24649	29651	29664	50192	50192					0.08446074267988024
PWPSVKLR	8	Unmodified	_PWPSVKLR_					0	0	0			REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7969055175781	2	491.795269	981.575986	-0.53143	-0.00026136	1.9035	0.00093611	1.372	0.00067476	491.79619139735206	56.69	1.2684	56.664	56.294	57.562	-0.026108					93	62	2	0	0	0	0.79929	1	4770	4770		18.324	0.95945	1	1036100	+		44318	24649	29651	29664	50193	50193					0.08446074267988024
PWPTRLVARK	10	Unmodified	_PWPTRLVARK_					0	0	0			REV__ENST00000368408.3_1_1:155059141-155059444:+|nuORF	REV__ENST00000368408.3_1_1:155059141-155059444:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.5838317871094	3	408.583897	1222.72986	1.3583	0.00055498	-0.91147	-0.00037241	0.44683	0.00018257	408.58343909999354	25.141	0.70901	24.813	24.521	25.23	-0.32825					45	15	4	0	0	0	0.86621	1	1277	1277		26.063	0.9374	1	443010	+		44319	25594	29652	29665	50194	50194					0.12740484033474786
PWQALQLLLAI	11	Unmodified	_PWQALQLLLAI_					0	0	0		nc|ENSG00000125831|Q9H112-2|CST11;ENSG00000125831|ENST00000377009|CST11	nc|ENSG00000125831|Q9H112-2|CST11	nc|ENSG00000125831|Q9H112-2|CST11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5924987792969	3	422.592058	1264.75434	-1.8214	-0.00076972	3.2668	0.0013805	1.4454	0.00061079	422.5933529014654	49.394	1.9735	49.419	48.567	50.541	0.025574					182	52	4	0	0	0	0.73621	1	3857	3857		25.126	0.89417	1	2033600			44320	3418	29653	29666	50195	50195					0.13255699396404452
PWQALQLLLAI	11	Unmodified	_PWQALQLLLAI_					0	0	0		nc|ENSG00000125831|Q9H112-2|CST11;ENSG00000125831|ENST00000377009|CST11	nc|ENSG00000125831|Q9H112-2|CST11	nc|ENSG00000125831|Q9H112-2|CST11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5928955078125	3	422.592058	1264.75434	-0.68255	-0.00028844	2.8706	0.0012131	2.188	0.00092464	422.59313934575044	54.378	2.61	54.329	53.535	56.145	-0.049271					161	81	4	0	0	0	0.73621	1	4492	4492		25.126	1.7481	1	1116400			44321	3418	29653	29666	50196	50196					0.13255699396404452
PWQRLLLT	8	Unmodified	_PWQRLLLT_					0	0	0		nc|ENSG00000105388|P06731-2|CEACAM5;ENSG00000105388|ENST00000221992|CEACAM5	nc|ENSG00000105388|P06731-2|CEACAM5	nc|ENSG00000105388|P06731-2|CEACAM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.80908203125	2	513.808377	1025.6022	0.37872	0.00019459	0.75131	0.00038603	1.13	0.00058062	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.85277	1	4202	4202		25.45	0	1	971720			44322	2212	29654	29667	50197	50197					0.09042343439477918
PWRKAQLL	8	Unmodified	_PWRKAQLL_					0	0	0		ENSG00000160703|ENST00000409109|NLRX1	ENSG00000160703|ENST00000409109|NLRX1	ENSG00000160703|ENST00000409109|NLRX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3100280761719	2	506.308544	1010.60253	-0.49442	-0.00025033	1.6696	0.00084534	1.1752	0.00059501	506.30930722746564	51.737	1.7906	51.772	50.998	52.788	0.034588					70	53	2	0	0	0	0.80706	1	4095	4095		19.36	1.995	1	138440			44323	5599	29655	29668	50198	50198					0.09765763159327889
PWRKILVD	8	Unmodified	_PWRKILVD_					0	0	0			REV__ENST00000513190.1_1_3:129233175-129239105:+|nuORF	REV__ENST00000513190.1_1_3:129233175-129239105:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087768554688	2	513.808377	1025.6022	-1.4174	-0.00072826	2.551	0.0013107	1.1336	0.00058246	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.85277	1	4009	4009		25.45	1.2474	1	1977600	+		44324	20997	29656	29669	50199	50199					0.09042343439477918
PWRKILVD	8	Unmodified	_PWRKILVD_					0	0	0			REV__ENST00000513190.1_1_3:129233175-129239105:+|nuORF	REV__ENST00000513190.1_1_3:129233175-129239105:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8087158203125	2	513.808377	1025.6022	0.35777	0.00018383	0.79125	0.00040655	1.149	0.00059038	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.80706	2	3893	3860;3893		25.45	2.4077	1	1443600	+		44325	20997	29656	29669	50200;50201	50201					0.09042343439477918
PWRLAIALVI	10	Unmodified	_PWRLAIALVI_					0	0	0			REV__ENST00000430515.1_1_3:194476389-194476791:+|nuORF	REV__ENST00000430515.1_1_3:194476389-194476791:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	576.8704223632812	2	576.368601	1150.72265	-0.7372	-0.0004249	1.7163	0.00098922	0.9791	0.00056432	576.3694812255828	46.694	1.765	46.68	45.831	47.597	-0.013821					91	46	2	0	0	0	0.86482	1	3810	3810		25.45	1.2474	1	191760	+		44326	26605	29657	29670	50202	50202					0.153317514330638
PWRLKGSCL	9	Unmodified	_PWRLKGSCL_					0	0	0			REV__ENST00000428687.1_1_1:247374055-247374160:-|nuORF	REV__ENST00000428687.1_1_1:247374055-247374160:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8109130859375	2	530.292037	1058.56952	2.9527	0.0015658	-1.6118	-0.00085473	1.3409	0.00071106	530.2911148137479	102.53	0.25673	102.83	102.64	102.9	0.29865					7	5	2	0	0	0	0.20789	1	12473	12473		51.335	3.6781	1	59882	+		44327	26585	29658	29671	50203	50203					0.04257813044955583
PWRLKGSCL	9	Unmodified	_PWRLKGSCL_					0	0	0			REV__ENST00000428687.1_1_1:247374055-247374160:-|nuORF	REV__ENST00000428687.1_1_1:247374055-247374160:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	530.292037	1058.56952	-0.033607	-1.7821E-05	2.9259	0.0015516	2.8923	0.0015337	530.2936034787025	102.93	0.37875	102.94	102.63	103.01	0.0082016	0.11765	0.0015115	NaN	51.335	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69947	+		44328	26585	29658	29671							0.04257813044955583
PWRLKGSCL	9	Unmodified	_PWRLKGSCL_					0	0	0			REV__ENST00000428687.1_1_1:247374055-247374160:-|nuORF	REV__ENST00000428687.1_1_1:247374055-247374160:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	530.292037	1058.56952	1.2433	0.00065932	1.822	0.00096617	3.0653	0.0016255	530.7940498098072	102.73	0.33775	102.78	102.54	102.88	0.043198	-0.04849	0.00034073	NaN	51.335	12	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88178	+		44329	26585	29658	29671							0.04257813044955583
PWRLKGSCL	9	Unmodified	_PWRLKGSCL_					0	0	0			REV__ENST00000428687.1_1_1:247374055-247374160:-|nuORF	REV__ENST00000428687.1_1_1:247374055-247374160:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	530.292037	1058.56952	-1.5164	-0.00080412	4.0291	0.0021366	2.5127	0.0013325	530.2943322632317	102.7	0.24989	102.84	102.65	102.9	0.13569	0.010922	0.0026816	NaN	51.335	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56922	+		44330	26585	29658	29671							0.04257813044955583
PWRLKVLGG	9	Unmodified	_PWRLKVLGG_					0	0	0		nc|ENSG00000129673|Q16613-2|AANAT	nc|ENSG00000129673|Q16613-2|AANAT	nc|ENSG00000129673|Q16613-2|AANAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3175048828125	2	513.316369	1024.61818	-0.35462	-0.00018203	1.0148	0.00052089	0.66014	0.00033886	513.3169096731813	53.695	2.201	53.717	52.714	54.915	0.022537					86	65	3	0	0	0	0.7932	1	4708	4708		24.203	2.2429	1	230160			44331	14902	29659	29672	50204	50204					0.10686049676382936
PWRLTLLAG	9	Unmodified	_PWRLTLLAG_					0	0	0			REV__ENST00000482378.6_2_12:56226934-56227222:+|nuORF	REV__ENST00000482378.6_2_12:56226934-56227222:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087768554688	2	513.808377	1025.6022	-1.3833	-0.00071076	2.6514	0.0013623	1.2681	0.00065157	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.7932	1	4207	4207		23.042	1.0826	1	1148600	+		44332	27464	29660	29673	50205	50205					0.09042343439477918
PWRLTLLAG	9	Unmodified	_PWRLTLLAG_					0	0	0			REV__ENST00000482378.6_2_12:56226934-56227222:+|nuORF	REV__ENST00000482378.6_2_12:56226934-56227222:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8094482421875	2	513.808377	1025.6022	-0.49115	-0.00025236	1.4357	0.00073767	0.94454	0.00048531	513.8089618478288	47.549	2.118	48.472	47.871	49.989	0.92315					109	52	4	0	0	0	0.78983	1	4528	4528		27.882	3.6795	1	2805200	+		44333	27464	29660	29673	50206	50206					0.09042343439477918
PWRPKSVI	8	Unmodified	_PWRPKSVI_					0	0	0		ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79486083984375	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.255	1	73.295	72.795	73.795	0.040024								0	0	0	0.29498	1	6998	6998		26.796	3.7536	1				44334	11305	29661	29674	50207	50207					0.08446074267999393
PWRPKSVI	8	Unmodified	_PWRPKSVI_					0	0	0		ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7968444824219	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.8347	1	4956	4956		23.042	1.0826	1	792830			44335	11305	29661	29674	50208	50208					0.08446074267999393
PWRPKSVI	8	Unmodified	_PWRPKSVI_					0	0	0		ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7969665527344	2	491.795269	981.575986	-0.36021	-0.00017715	1.3022	0.0006404	0.94195	0.00046325	491.79587618632917	55.368	1.5692	55.341	54.702	56.271	-0.027279					123	47	4	0	0	0	0.87922	2	4981	4973;4981		37.159	1.9584	1	1374900			44336	11305	29661	29674	50209;50210	50210					0.08446074267999393
PWRPKSVI	8	Unmodified	_PWRPKSVI_					0	0	0		ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7948303222656	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.051	1	62.018	61.518	62.518	-0.033173								0	0	0	0.29703	1	5870	5870		37.159	2.9866	1				44337	11305	29661	29674	50211	50211					0.08446074267999393
PWRPKSVI	8	Unmodified	_PWRPKSVI_					0	0	0		ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79522705078125	2	491.795269	981.575986	-2.6015	-0.0012794	1.8265	0.00089829	-0.77498	-0.00038113	491.7965338036507	61.872	0.72826	61.902	61.614	62.342	0.029575					42	30	2	0	0	0	0.89043	1	5783	5783		35.618	2.1027	1	169920			44338	11305	29661	29674	50212	50212					0.08446074267999393
PWRPKSVI	8	Unmodified	_PWRPKSVI_					0	0	0		ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7945251464844	2	491.795269	981.575986	-0.71044	-0.00034939	1.6504	0.00081164	0.93993	0.00046225	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.89043	1	3959	3959		35.618	7.364	1	571510			44339	11305	29661	29674	50213	50213					0.08446074267999393
PWRPKSVI	8	Unmodified	_PWRPKSVI_					0	0	0		ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7946472167969	2	491.795269	981.575986	-0.66987	-0.00032944	1.9663	0.00096699	1.2964	0.00063756	491.79618390061455	72.936	0.85153	73.065	72.466	73.317	0.1292					49	29	2	0	0	0	0.86288	1	6714	6714		26.796	1.3459	1	77471			44340	11305	29661	29674	50214	50214					0.08446074267999393
PWRPKSVI	8	Unmodified	_PWRPKSVI_					0	0	0		ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	ENST00000409333.1_1_2:170657480-170662026:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79541015625	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.87479	1	4222	4222		30.504	2.2494	1	748320			44341	11305	29661	29674	50215	50215					0.08446074267999393
PWRTSSAPS	9	Unmodified	_PWRTSSAPS_					0	0	0		ENST00000467246.5_1_10:100195492-100202894:-|nuORF	ENST00000467246.5_1_10:100195492-100202894:-|nuORF	ENST00000467246.5_1_10:100195492-100202894:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7455139160156	2	494.745973	987.477394	-0.72364	-0.00035802	0.81794	0.00040467	0.094301	4.6655E-05	494.74623529798345	19.99	0.36725	20.034	19.884	20.251	0.043749					27	17	2	0	0	0	0.73802	1	464	464		37.812	2.1932	1	139020			44342	12154	29662	29675	50216	50216					-0.016845737677272155
PWSPLLLW	8	Unmodified	_PWSPLLLW_					0	0	0			REV__ENSG00000198888|ENST00000361390|MT-ND1	REV__ENSG00000198888|ENST00000361390|MT-ND1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.2918395996094	2	506.286746	1010.55894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.159	1	53.207	52.707	53.707	0.047802								0	0	0	0.30609	1	4330	4330		44.531	0.41427	1		+		44343	23405	29663	29676	50217	50217					0.054081536621765736
PWSRKVLP	8	Unmodified	_PWSRKVLP_					0	0	0			REV__nc|ENSG00000091592|Q9C000-5|NLRP1	REV__nc|ENSG00000091592|Q9C000-5|NLRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7960205078125	2	491.795269	981.575986	0.16895	8.3091E-05	0.70742	0.00034791	0.87638	0.000431	491.795491652363	46.653	1.8507	46.639	45.976	47.827	-0.013821					152	52	4	0	0	0	0.86288	2	3862	3862;3903		31.955	1.4512	1	2674700	+		44344	17019	29664	29677	50218;50219	50218					0.08446074267999393
PWSRKVLP	8	Unmodified	_PWSRKVLP_					0	0	0			REV__nc|ENSG00000091592|Q9C000-5|NLRP1	REV__nc|ENSG00000091592|Q9C000-5|NLRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7951354980469	2	491.795269	981.575986	-1.7512	-0.00086123	2.5855	0.0012715	0.83426	0.00041029	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.87479	1	3920	3920		30.504	3.7075	1	2627300	+		44345	17019	29664	29677	50220	50220					0.08446074267999393
PWSRKVLP	8	Unmodified	_PWSRKVLP_					0	0	0			REV__nc|ENSG00000091592|Q9C000-5|NLRP1	REV__nc|ENSG00000091592|Q9C000-5|NLRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7954406738281	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.884	1	4539	4539		33.516	3.0119	1	703950	+		44346	17019	29664	29677	50221	50221					0.08446074267999393
PWSRKVLP	8	Unmodified	_PWSRKVLP_					0	0	0			REV__nc|ENSG00000091592|Q9C000-5|NLRP1	REV__nc|ENSG00000091592|Q9C000-5|NLRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7957763671875	2	491.795269	981.575986	-2.0878	-0.0010268	2.9764	0.0014638	0.88855	0.00043698	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.80706	1	4901	4901		19.36	0	1	1484300	+		44347	17019	29664	29677	50222	50222					0.08446074267999393
PWSRKVLP	8	Unmodified	_PWSRKVLP_					0	0	0			REV__nc|ENSG00000091592|Q9C000-5|NLRP1	REV__nc|ENSG00000091592|Q9C000-5|NLRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79534912109375	2	491.795269	981.575986	-0.72034	-0.00035426	1.4985	0.00073695	0.77816	0.00038269	491.7958614454625	45.142	1.3703	45.154	44.592	45.963	0.012058					80	34	3	0	0	0	0.79929	1	3213	3213		18.324	0	1	396090	+		44348	17019	29664	29677	50223	50223					0.08446074267999393
PWSRKVLP	8	Unmodified	_PWSRKVLP_					0	0	0			REV__nc|ENSG00000091592|Q9C000-5|NLRP1	REV__nc|ENSG00000091592|Q9C000-5|NLRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7949523925781	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.85277	1	3628	3628		25.45	0	1	1346800	+		44349	17019	29664	29677	50224	50224					0.08446074267999393
PWSRKVLP	8	Unmodified	_PWSRKVLP_					0	0	0			REV__nc|ENSG00000091592|Q9C000-5|NLRP1	REV__nc|ENSG00000091592|Q9C000-5|NLRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956848144531	2	491.795269	981.575986	0.44364	0.00021818	-0.6083	-0.00029916	-0.16465	-8.0976E-05	491.7950876173739	61.702	0.68761	61.821	61.679	62.366	0.11901					43	29	2	0	0	0	0.87479	1	5379	5379		30.504	0.6621	1	220410	+		44350	17019	29664	29677	50225	50225					0.08446074267999393
PWSRKVLP	8	Unmodified	_PWSRKVLP_					0	0	0			REV__nc|ENSG00000091592|Q9C000-5|NLRP1	REV__nc|ENSG00000091592|Q9C000-5|NLRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7952880859375	2	491.795269	981.575986	-0.41148	-0.00020237	1.3216	0.00064997	0.91013	0.0004476	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.79929	1	4434	4434		18.324	0.95945	1	887820	+		44351	17019	29664	29677	50226	50226					0.08446074267999393
PWTLVQLR	8	Unmodified	_PWTLVQLR_					0	0	0			REV__ENST00000240364.6_1_17:47788888-47793614:-|nuORF	REV__ENST00000240364.6_1_17:47788888-47793614:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.80145263671875	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.43	1	43.43	42.93	43.93	0								0	0	0	0.29871	1	3080	3080		23.042	0	1		+		44352	24225	29665	29678	50227	50227					0.08122056922422871
PWTLVQLR	8	Unmodified	_PWTLVQLR_					0	0	0			REV__ENST00000240364.6_1_17:47788888-47793614:-|nuORF	REV__ENST00000240364.6_1_17:47788888-47793614:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	507.3003234863281	2	506.800552	1011.58655	0.035087	1.7782E-05	1.482	0.00075107	1.5171	0.00076886	506.80134407750546	51.852	1.4357	51.85	50.901	52.337	-0.0020447					55	33	2	0	0	0	0.85277	1	4427	4427		25.45	0	1	101000	+		44353	24225	29665	29678	50228	50228					0.08122056922422871
PWTPLFISLP	10	Unmodified	_PWTPLFISLP_					0	0	0		ENST00000225665.11_1_17:4840855-4840987:-|nuORF	ENST00000225665.11_1_17:4840855-4840987:-|nuORF	ENST00000225665.11_1_17:4840855-4840987:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.8295288085938	2	585.831517	1169.64848	-0.92321	-0.00054084	-1.0567	-0.00061903	-1.9799	-0.0011599	585.8307293050794	57.888	1.4017	57.888	57.479	58.881	0					105	56	3	0	0	0	0.85934	1	4968	4968		35.618	6.4482	1	164040			44354	9189	29666	29679	50229	50229					0.07044363550903654
PWTRGLLLA	9	Unmodified	_PWTRGLLLA_					0	0	0			REV__ENST00000529281.5_1_11:102933090-102962462:-|nuORF	REV__ENST00000529281.5_1_11:102933090-102962462:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8092041015625	2	513.808377	1025.6022	-1.3833	-0.00071076	2.6514	0.0013623	1.2681	0.00065157	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.7932	1	4299	4299		23.042	3.6825	1	1148600	+		44355	19400	29667	29680	50230	50230					0.09042343439477918
PWTRGLLLA	9	Unmodified	_PWTRGLLLA_					0	0	0			REV__ENST00000529281.5_1_11:102933090-102962462:-|nuORF	REV__ENST00000529281.5_1_11:102933090-102962462:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8080444335938	2	513.808377	1025.6022	-0.38547	-0.00019806	1.7192	0.00088333	1.3337	0.00068527	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.7932	1	3824	3824		25.45	0.93098	1	1377600	+		44356	19400	29667	29680	50231	50231					0.09042343439477918
PWTRGLLLA	9	Unmodified	_PWTRGLLLA_					0	0	0			REV__ENST00000529281.5_1_11:102933090-102962462:-|nuORF	REV__ENST00000529281.5_1_11:102933090-102962462:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.808837890625	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.7932	1	4192	4192		23.042	1.0826	1	926440	+		44357	19400	29667	29680	50232	50232					0.09042343439477918
PWTRGLLLA	9	Unmodified	_PWTRGLLLA_					0	0	0			REV__ENST00000529281.5_1_11:102933090-102962462:-|nuORF	REV__ENST00000529281.5_1_11:102933090-102962462:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8087158203125	2	513.808377	1025.6022	0.35777	0.00018383	0.79125	0.00040655	1.149	0.00059038	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.78058	1	3872	3872		30.504	6.3009	1	1443600	+		44358	19400	29667	29680	50233	50233					0.09042343439477918
PWTRGLLLA	9	Unmodified	_PWTRGLLLA_					0	0	0			REV__ENST00000529281.5_1_11:102933090-102962462:-|nuORF	REV__ENST00000529281.5_1_11:102933090-102962462:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.808837890625	2	513.808377	1025.6022	-0.15906	-8.1728E-05	1.3381	0.00068753	1.179	0.0006058	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.76255	1	3693	3693		35.618	5.1146	1	1484700	+		44359	19400	29667	29680	50234	50234					0.09042343439477918
PWTVRLLQ	8	Unmodified	_PWTVRLLQ_					0	0	0		ENSG00000015532|ENST00000017003|XYLT2	ENSG00000015532|ENST00000017003|XYLT2	ENSG00000015532|ENST00000017003|XYLT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7987976074219	2	506.800552	1011.58655	-1.5095	-0.000765	2.422	0.0012274	0.91248	0.00046244	506.8017338500082	46.598	2.104	46.598	45.336	47.44	0					97	57	2	0	0	0	0.87479	1	3379	3379		30.504	3.7075	1	294110			44360	824	29668	29681	50235	50235					0.08122056922411502
PWTVRLLQ	8	Unmodified	_PWTVRLLQ_					0	0	0		ENSG00000015532|ENST00000017003|XYLT2	ENSG00000015532|ENST00000017003|XYLT2	ENSG00000015532|ENST00000017003|XYLT2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.80023193359375	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.75	1	45.719	45.219	46.219	-0.031067								0	0	0	0.29344	1	3721	3721		31.955	4.0726	1				44361	824	29668	29681	50236	50236					0.08122056922411502
PWTVRLLQ	8	Unmodified	_PWTVRLLQ_					0	0	0		ENSG00000015532|ENST00000017003|XYLT2	ENSG00000015532|ENST00000017003|XYLT2	ENSG00000015532|ENST00000017003|XYLT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.79986572265625	2	506.800552	1011.58655	-1.1816	-0.00059884	1.4736	0.00074682	0.29199	0.00014798	506.8012726682809	44.534	3.0875	44.53	42.489	45.577	-0.0041618					139	73	2	0	0	0	0.87064	2	3487	3451;3487		30.504	4.9468	1	459990			44362	824	29668	29681	50237;50238	50238					0.08122056922411502
PWVKPSRKRR	10	Unmodified	_PWVKPSRKRR_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2679443359375	3	437.270312	1308.78911	-1.7231	-0.00075344	-3.9149	-0.0017119	-5.638	-0.0024653	437.26850375985913	50.916	1.5264	50.916	50.06	51.586	0					171	39	5	0	0	0	0.86014	1	4074	4074		23.378	0.79825	1	3001200			44363	8437	29669	29682	50239	50239					0.14706380047687162
PWVLPRGGL	9	Unmodified	_PWVLPRGGL_					0	0	0			REV__ENST00000491892.1_1_22:20082246-20094325:+|nuORF	REV__ENST00000491892.1_1_22:20082246-20094325:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.79510498046875	2	497.795269	993.575986	-0.66885	-0.00033295	1.9666	0.00097898	1.2978	0.00064603	497.7958642477004	48.816	1.5297	48.791	47.88	49.41	-0.025112					123	35	4	0	0	0	0.7932	1	4160	4160		25.45	2.4077	1	502690	+		44364	27664	29670	29683	50240	50240					0.0789407426799471
PWWPGAGPS	9	Unmodified	_PWWPGAGPS_					0	0	0		ENST00000475146.1_1_20:34252448-34252655:-|nuORF	ENST00000475146.1_1_20:34252448-34252655:-|nuORF	ENST00000475146.1_1_20:34252448-34252655:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	477.7284240722656	2	477.727052	953.439552	0.75595	0.00036114	2.5926	0.0012385	3.3485	0.0015997	477.7281767160498	97.974	1.0146	98.134	97.668	98.683	0.16073					48	22	3	0	0	0	0.5393	1	10156	10156		50.025	12.213	1	430400			44365	12317	29671	29684	50241	50241					-0.03903039962528965
PWYGYTGANSF	11	Unmodified	_PWYGYTGANSF_					0	0	0			REV__ENSG00000186049|ENST00000305748|KRT73	REV__ENSG00000186049|ENST00000305748|KRT73	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	631.7766723632812	2	631.77747	1261.54039	-0.21154	-0.00013365	-0.54576	-0.0003448	-0.7573	-0.00047844	632.2784723295553	31.434	0.39645	31.383	31.171	31.567	-0.051033					15	8	2	0	0	0	0.74405	1	1792	1792		19.997	2.5288	1	29305	+	+	44366	16007	29672	29685	50242	50242					-0.0799205277035071
PYAQQLRVF	9	Unmodified	_PYAQQLRVF_					0	0	0		ENST00000433302.7_1_17:5357282-5372070:-|nuORF;ENST00000575153.5_1_17:5347527-5364435:-|nuORF;nc|ENSG00000005100|Q9H6R0-2|DHX33;ENSG00000005100|ENST00000225296|DHX33	ENST00000433302.7_1_17:5357282-5372070:-|nuORF	ENST00000433302.7_1_17:5357282-5372070:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.8116455078125	2	561.308741	1120.60293	-0.34103	-0.00019142	4.0527	0.0022748	3.7117	0.0020834	561.8121876312182	60.416	1.3094	60.806	60.013	61.322	0.38945					62	35	3	0	0	0	0.78058	1	6416	6416		30.504	0.6621	1	1336500			44367	673	29673	29686	50243	50243					0.047451380885149774
PYAVIMVPV	9	Unmodified	_PYAVIMVPV_					0	0	0			REV__ENSG00000152580|ENST00000282466|IGSF10	REV__ENSG00000152580|ENST00000282466|IGSF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7801208496094	2	494.780439	987.546325	-0.60063	-0.00029718	0.47387	0.00023446	-0.12676	-6.2719E-05	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.78292	1	8544	8544		29.842	1.9593	1	707910	+		44368	20306	29674	29687	50244	50244					0.05205374207639579
PYDAMHKLRL	10	Unmodified	_PYDAMHKLRL_					0	0	0			REV__ENSG00000176887|ENST00000322002|SOX11;REV__ENSG00000124766|ENST00000244745|SOX4	REV__ENSG00000176887|ENST00000322002|SOX11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	622.3360595703125	2	622.334433	1242.65431	0.92215	0.00057388	1.5865	0.0009873	2.5086	0.0015612	622.3353656698207	110.48	0.86303	110.55	110.31	111.17	0.073685					59	28	3	0	0	0	0.85934	1	11873	11873		35.618	0	1	819510	+		44369	22150;18609	29675	29688	50245	50245					0.042691387909144396
PYDAMHKLRL	10	Unmodified	_PYDAMHKLRL_					0	0	0			REV__ENSG00000176887|ENST00000322002|SOX11;REV__ENSG00000124766|ENST00000244745|SOX4	REV__ENSG00000176887|ENST00000322002|SOX11	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	622.3369750976562	2	622.334433	1242.65431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.48	1	110.47	109.97	110.97	-0.0074387								0	0	0	0.45132	1	11778	11778		31.53	18.076	1		+		44370	22150;18609	29675	29688	50246	50246					0.042691387909144396
PYHPSLLP	8	Unmodified	_PYHPSLLP_					0	0	0		nc|ENSG00000137075|Q9H0F5-5|RNF38;nc|ENSG00000137075|Q9H0F5-3|RNF38;nc|ENSG00000137075|Q9H0F5-4|RNF38;nc|ENSG00000137075|Q9H0F5-2|RNF38;ENSG00000137075|ENST00000259605|RNF38	nc|ENSG00000137075|Q9H0F5-5|RNF38	nc|ENSG00000137075|Q9H0F5-5|RNF38	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	462.2540588378906	2	462.252903	922.491253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.397	1	47.371	46.871	47.871	-0.026737								0	0	0	0.30609	1	3950	3950		44.531	0	1				44371	4169	29676	29689	50247	50247					0.026907037313776527
PYIVICFLVVN	11	Unmodified	_PYIVICFLVVN_					0	0	0		ENST00000463155.5_1_1:241757732-241840646:-|nuORF;nc|ENSG00000203668|Q9H1Y3-2|OPN3;ENSG00000054277|ENST00000366554|OPN3;ENST00000462265.5_1_1:241755332-241761290:-|nuORF	ENST00000463155.5_1_1:241757732-241840646:-|nuORF	ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3602905273438	2	640.359585	1278.70462	2.419	0.001549	-3.5834	-0.0022947	-1.1645	-0.00074568	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.61774	1	10872	10872		42.396	6.0785	1	625580			44372	1017	29677	29690	50248	50248					0.0764124839604392
PYKHIKVNRPI	11	Unmodified	_PYKHIKVNRPI_					0	0	0		nc|ENSG00000165671|Q96L73-3|NSD1;ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1	nc|ENSG00000165671|Q96L73-3|NSD1	nc|ENSG00000165671|Q96L73-3|NSD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6079406738281	3	455.610223	1363.80884	-1.2135	-0.00055287	-2.7106	-0.001235	-3.924	-0.0017878	455.6089380112046	69.06	0.71138	69.195	68.826	69.537	0.13521					50	31	2	0	0	0	0.73621	1	6243	6243		25.126	0	1	210520			44373	6108	29678	29691	50249	50249					0.14148711267785075
PYLLAMLPQ	9	Unmodified	_PYLLAMLPQ_					0	0	0			REV__nc|ENSG00000111325|Q6N063-4|OGFOD2	REV__nc|ENSG00000111325|Q6N063-4|OGFOD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.28173828125	2	523.291171	1044.56779	2.4873	0.0013016	-0.35154	-0.00018396	2.1358	0.0011176	523.7919511801673	25.233	0.61031	24.802	24.499	25.109	-0.4311					24	13	3	0	0	0	0.20789	1	1258	1258		17.365	0	1	83515	+		44374	17865	29679	29692	50250	50250					0.04728759236354563
PYPNKNRCL	9	Unmodified	_PYPNKNRCL_					0	0	0			REV__ENSG00000185467|ENST00000327442|KPNA7	REV__ENSG00000185467|ENST00000327442|KPNA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.2925415039062	2	552.784576	1103.5546	-0.45661	-0.0002524	-1.3849	-0.00076557	-1.8415	-0.001018	552.7837252488644	75.397	0.54607	75.792	75.489	76.035	0.39507					24	12	3	0	0	0	0.25826	1	8533	8533		68.485	2.0554	1	156970	+		44375	22767	29680	29693	50251	50251					0.00696321176951642
PYPSVAILLV	10	Unmodified	_PYPSVAILLV_					0	0	0			REV__ENSG00000148357|ENST00000683500|HMCN2	REV__ENSG00000148357|ENST00000683500|HMCN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7700805664062	2	536.326068	1070.63758	-0.4135	-0.00022177	-3.1712	-0.0017008	-3.5847	-0.0019226	536.32421932687	70.553	1.0005	70.937	70.627	71.627	0.38416					37	23	2	0	0	0	0.37624	1	7843	7843		35.618	0	1	345720	+		44376	20112	29681	29694	50252	50252					0.10508961176606135
PYRLSPPVLPL	11	Unmodified	_PYRLSPPVLPL_					0	0	0		ENSG00000179299|ENST00000381782|NSUN7	ENSG00000179299|ENST00000381782|NSUN7	ENSG00000179299|ENST00000381782|NSUN7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.92230224609375	3	417.920174	1250.73869	3.1807	0.0013293	1.9124	0.00079924	5.0931	0.0021285	417.9209605426618	105.73	2.7025	105.77	104.99	107.7	0.038322					262	63	6	0	0	0	0.72918	1	11491	11491		23.378	0	1	23553000			44377	7263	29682	29695	50253	50253					0.123354128793153
PYSLRKAYSA	10	Unmodified	_PYSLRKAYSA_					0	0	0		ENSG00000113946|ENST00000264734|CLDN16	ENSG00000113946|ENST00000264734|CLDN16	ENSG00000113946|ENST00000264734|CLDN16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	578.3106689453125	2	578.31148	1154.60841	0.66204	0.00038287	-2.1559	-0.0012468	-1.4939	-0.00086394	578.3100530437905	110.07	1.6087	110.19	110.03	111.64	0.11946					88	58	4	0	0	0	0.86272	1	11839	11839		24.519	0	1	2568100			44378	2754	29683	29696	50254	50254					0.037288168803115695
PYTRPKTHK	9	Unmodified	_PYTRPKTHK_					0	0	0			REV__nc|ENSG00000169607|Q8IYA6-3|CKAP2L	REV__nc|ENSG00000169607|Q8IYA6-3|CKAP2L	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.3213500976562	2	564.31964	1126.62473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.215	1	55.178	54.678	55.678	-0.036827								0	0	0	0.301	1	4615	4615		30.318	2.4355	1		+		44379	21590	29684	29697	50255	50255					0.06647942837071241
PYVPSDKDL	9	Unmodified	_PYVPSDKDL_					0	0	0			REV__ENSG00000113722|ENST00000231656|CDX1	REV__ENSG00000113722|ENST00000231656|CDX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2627563476562	2	517.263665	1032.51278	-0.47672	-0.00024659	0.7216	0.00037326	0.24488	0.00012667	517.2637742263854	57.187	0.80981	57.581	57.157	57.967	0.39407					45	19	4	0	0	0	0.6204	1	5932	5932		45.972	1.8554	1	928490	+		44380	18010	29685	29698	50256	50256					-0.00217956030564892
PYVPSDKDL	9	Unmodified	_PYVPSDKDL_					0	0	0			REV__ENSG00000113722|ENST00000231656|CDX1	REV__ENSG00000113722|ENST00000231656|CDX1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	517.263665	1032.51278	-0.47672	-0.00024659	0.7216	0.00037326	0.24488	0.00012667	517.2637742263854	57.187	0.80981	57.581	57.157	57.967	0.39407	-0.019944	0.00080641	NaN	45.972	45	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	928490	+		44381	18010	29685	29698							-0.00217956030564892
PYVSSTGE	8	Unmodified	_PYVSSTGE_					0	0	0			REV__ENSG00000176771|ENST00000409261|NCKAP5	REV__ENSG00000176771|ENST00000409261|NCKAP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1905517578125	2	420.192708	838.370863	-0.017504	-7.3551E-06	-3.0933	-0.0012998	-3.1109	-0.0013072	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.884	1	11136	11136		33.516	0	1	4147200	+		44382	22144	29686	29699	50257	50257					-0.054787490528838134
QAAGTTPGP	9	Unmodified	_QAAGTTPGP_					0	0	0		ENSG00000185803|ENST00000643944|SLC52A2	ENSG00000185803|ENST00000643944|SLC52A2	ENSG00000185803|ENST00000643944|SLC52A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2005310058594	2	400.200867	798.387182	-1.2405	-0.00049646	-2.0317	-0.00081307	-3.2722	-0.0013095	400.201810521261	68.411	1.2277	68.471	68.02	69.248	0.059288					82	51	3	0	0	0	0.62081	1	6184	6184		45.952	1.8352	1	208600			44383	7743	29687	29700	50258	50258					-0.02007623096142197
QAAGTTPGP	9	Unmodified	_QAAGTTPGP_					0	0	0		ENSG00000185803|ENST00000643944|SLC52A2	ENSG00000185803|ENST00000643944|SLC52A2	ENSG00000185803|ENST00000643944|SLC52A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2007751464844	2	400.200867	798.387182	-0.072413	-2.898E-05	-3.5103	-0.0014048	-3.5827	-0.0014338	400.2011984622312	64.759	1.0181	65.313	64.852	65.87	0.55386					57	25	3	0	0	0	0.47272	2	7017	7017;7074		53.351	3.3269	1	265310			44384	7743	29687	29700	50259;50260	50259					-0.02007623096142197
QAAHADDF	8	Unmodified	_QAAHADDF_					0	0	0		nc|ENSG00000204267|Q03519-2|TAP2;ENSG00000204267|ENST00000374897|TAP2	nc|ENSG00000204267|Q03519-2|TAP2	nc|ENSG00000204267|Q03519-2|TAP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713623046875	2	437.688124	873.361695	1.7546	0.00076798	-3.4228	-0.0014981	-1.6682	-0.00073016	437.68777718259946	36.451	0.12567	36.891	36.786	36.912	0.44043					4	2	2	0	0	0	0.4196	1	2875	2875		25.45	0	1	32662			44385	8426	29688	29701	50261	50261					-0.0800509761857029
QAALPPFRL	9	Unmodified	_QAALPPFRL_					0	0	0			REV__ENST00000417381.5_1_22:28315512-28315788:+|nuORF	REV__ENST00000417381.5_1_22:28315512-28315788:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7982177734375	2	506.800552	1011.58655	0.069929	3.544E-05	1.3087	0.00066326	1.3786	0.0006987	506.8012448436958	50.379	1.4088	50.377	49.492	50.901	-0.0020447					63	39	2	0	0	0	0.78058	1	4285	4285		30.504	1.3541	1	123380	+		44386	26442	29689	29702	50262	50262					0.08122056922411502
QAAQILVPL	9	Unmodified	_QAAQILVPL_					0	0	0			REV__nc|ENSG00000174780|O76094-2|SRP72	REV__nc|ENSG00000174780|O76094-2|SRP72	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.795166015625	2	476.794935	951.575317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.008	1	23.01	22.51	23.51	0.0018959								0	0	0	0.28877	1	708	708		35.201	0	1		+		44387	22013	29690	29703	50263	50263					0.09759234828266017
QAARNSQH	8	Unmodified	_QAARNSQH_					0	0	0			REV__ENST00000548178.1_1_14:105459311-105476648:+|nuORF	REV__ENST00000548178.1_1_14:105459311-105476648:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.793212890625	2	456.225739	910.436926	1.2221	0.00055757	2.2949	0.001047	3.5171	0.0016046	456.2266650565098	34.829	0.61991	35.21	34.977	35.597	0.3812					26	15	2	0	0	0	0.4196	1	2690	2690		31.955	12.595	1	276110	+		44388	28563	29691	29704	50264	50264					-0.021874953674796416
QAARRDPE	8	Unmodified	_QAARRDPE_					0	0	0			REV__ENST00000447263.1_1_1:39980824-39982159:+|nuORF	REV__ENST00000447263.1_1_1:39980824-39982159:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76983642578125	2	471.741222	941.467892	-0.44419	-0.00020954	-1.7394	-0.00082054	-2.1836	-0.0010301	471.74067020282916	83.683	0.78956	84.118	83.876	84.666	0.43538					29	18	2	0	0	0	0.4196	1	9713	9713		29.15	1.2673	1	106710	+		44389	26817	29692	29705	50265	50265					-0.005183420532489436
QAATKPLAP	9	Unmodified	_QAATKPLAP_					0	0	0			REV__ENSG00000204394|ENST00000375663|VARS1	REV__ENSG00000204394|ENST00000375663|VARS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.3059997558594	2	448.763635	895.512717	0.046377	2.0812E-05	0.17806	7.9907E-05	0.22444	0.00010072	448.7635773798138	20.759	0.63154	20.3	19.869	20.501	-0.4591					21	14	2	0	0	0	0.20789	1	689	689		19.997	16.012	1	47253	+		44390	23487	29693	29706	50266	50266					0.06078088760079936
QACKEKLL	8	Unmodified	_QACKEKLL_					0	0	0		nc|ENSG00000125844|Q9P2E9-3|RRBP1;ENSG00000125844|ENST00000377813|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.28204345703125	2	466.76532	931.516088	0.425	0.00019838	2.8664	0.0013379	3.2914	0.0015363	466.76573719442916	21.063	0.17785	20.603	20.54	20.718	-0.4591					5	3	2	0	0	0	0.4196	1	727	727		25.45	7.1258	1	19626			44391	3420	29694	29707	50267	50267					0.04759015542447287
QADSCCERCQ	10	Unmodified	_QADSCCERCQ_					0	0	0		ENSG00000135253|ENST00000610776|KCP;ENST00000492679.5_1_7:128505031-128520709:-|nuORF	ENSG00000135253|ENST00000610776|KCP	ENSG00000135253|ENST00000610776|KCP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.7015991210938	2	571.704808	1141.39506	-0.12615	-7.2123E-05	-3.39	-0.0019381	-3.5161	-0.0020102	571.702756822466	31.642	0.48851	31.591	31.289	31.778	-0.051033					16	10	2	0	0	0	0.86802	1	1797	1797		27.047	7.0505	1	44746			44392	3997	29695	29708	50268	50268					-0.16997923224857914
QAEDAREEQLA	11	Unmodified	_QAEDAREEQLA_					0	0	0			REV__ENSG00000163820|ENST00000296137|FYCO1	REV__ENSG00000163820|ENST00000296137|FYCO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	630.2965087890625	2	630.296756	1258.57896	0.77751	0.00049006	-0.52359	-0.00033002	0.25391	0.00016004	630.2963652604675	23.87	1.0195	23.826	23.466	24.486	-0.043221					83	28	4	0	0	0	0.66929	1	830	830		36.447	0	1	436810	+		44393	20980	29696	29709	50269	50269					-0.03998791926483136
QAEEAPEVL	9	Unmodified	_QAEEAPEVL_					0	0	0		nc|ENSG00000163803|Q6P1J6-3|PLB1;ENSG00000163803|ENST00000327757|PLB1;nc|ENSG00000163803|Q6P1J6-5|PLB1	nc|ENSG00000163803|Q6P1J6-3|PLB1	nc|ENSG00000163803|Q6P1J6-3|PLB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.24481201171875	2	493.245472	984.476391	-0.22235	-0.00010967	1.4183	0.00069959	1.196	0.00058992	493.2460736786689	27.772	1.7235	27.734	27.305	29.029	-0.038523					102	45	4	0	0	0	0.6204	1	1327	1327		45.972	8.1607	1	1093300			44394	5867	29697	29710	50270	50270					-0.016468329272925075
QAEERSLF	8	Unmodified	_QAEERSLF_					0	0	0			REV__nc|ENSG00000167302|Q96N21|TEPSIN	REV__nc|ENSG00000167302|Q96N21|TEPSIN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.216552734375	2	490.245806	978.47706	0.67677	0.00033178	2.8871	0.0014154	3.5639	0.0017472	490.2470997578428	28.691	0.94716	28.517	28.16	29.107	-0.17336					59	22	4	0	0	0	0.4196	1	1817	1817		27.882	7.8855	1	1621800	+		44395	21374	29698	29711	50271	50271					-0.013039934875791914
QAEIQEMKEAL	11	Unmodified	_QAEIQEMKEAL_					0	0	0		nc|ENSG00000162520|Q9H7C4-2|SYNC;ENSG00000162520|ENST00000409190|SYNC	nc|ENSG00000162520|Q9H7C4-2|SYNC	nc|ENSG00000162520|Q9H7C4-2|SYNC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	645.3277587890625	2	645.323928	1288.6333	0.1295	8.3573E-05	2.9565	0.0019079	3.086	0.0019915	645.3256819340743	61.949	0.44659	61.978	61.738	62.185	0.029575					29	16	2	0	0	0	0.73621	1	5791	5791		25.126	0.6068	1	208080			44396	5696	29699	29712	50272	50272					0.0005308390075242642
QAEPTEIP	8	Unmodified	_QAEPTEIP_					0	0	0			REV__ENSG00000145087|ENST00000471454|STXBP5L	REV__ENSG00000145087|ENST00000471454|STXBP5L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.7223205566406	2	442.721633	883.428712	1.3757	0.00060905	0.9152	0.00040518	2.2909	0.0010142	442.72174062194034	27.904	1.1856	27.881	27.606	28.792	-0.023556					62	28	3	0	0	0	0.91977	1	1306	1306		45.952	3.4775	1	143380	+		44397	19925	29700	29713	50273	50273					-0.017664871274746474
QAETEAVTCEL	11	Unmodified	_QAETEAVTCEL_					0	0	0			REV__ENSG00000204889|ENST00000377755|KRT40	REV__ENSG00000204889|ENST00000377755|KRT40	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.2767944335938	2	597.271361	1192.52817	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.035	1	56.135	55.635	56.635	0.099186								0	0	0	0.56276	1	4723	4723		42.864	5.7052	1		+	+	44398	16020	29701	29714	50274	50274					-0.06039457295696593
QAFEPHKKRI	10	Unmodified	_QAFEPHKKRI_					0	0	0			REV__nc|ENSG00000170325|Q9NQV6-2|PRDM10	REV__nc|ENSG00000170325|Q9NQV6-2|PRDM10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.9155578613281	3	418.57529	1252.70404	0.29359	0.00012289	0.44797	0.00018751	0.74156	0.0003104	418.5752649111673	31.001	0.77761	31.004	30.667	31.444	0.0037212					28	15	3	0	0	0	0.37624	1	2071	2071		46.457	31.119	1	298120	+		44399	21649	29702	29715	50275	50275					0.08779589791220133
QAFETPPL	8	Unmodified	_QAFETPPL_					0	0	0			REV__nc|ENSG00000160584|Q9Y2K2-7|SIK3	REV__nc|ENSG00000160584|Q9Y2K2-7|SIK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.7337951660156	2	451.734543	901.454533	1.0785	0.00048718	-2.0611	-0.00093107	-0.98262	-0.00044388	451.73371120029606	105.6	0.57723	105.76	105.43	106.01	0.15583					28	13	3	0	0	0	0.87922	1	12852	12852		31.955	0	1	285210	+		44400	20724	29703	29716	50276	50276					-0.0001359288519324764
QAFSQSSNLV	10	Unmodified	_QAFSQSSNLV_					0	0	0		ENSG00000250571|ENST00000340042|GLI4;ENST00000523812.1_1_8:144357822-144358971:+|nuORF	ENSG00000250571|ENST00000340042|GLI4	ENSG00000250571|ENST00000340042|GLI4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.7702026367188	2	540.769645	1079.52474	0.57209	0.00030937	-0.81256	-0.00043941	-0.24046	-0.00013004	540.769164777934	24.023	0.62648	24.078	23.732	24.358	0.055485					22	14	2	0	0	0	0.86225	1	820	820		32.751	1.2207	1	72341			44401	8848	29704	29717	50277	50277					-0.011843392873743142
QAGKARLP	8	Unmodified	_QAGKARLP_					0	0	0		chr6:43158968-43160721|23|22.43|0.24|6.56|+|2|PTK7,PTK7|1;chr6:43146698-43160721|24|16.21|0.14|6.82|+|2|PTK7,PTK7|1;ENST00000487673.5_1_6:43111066-43128616:+|nuORF;nc|ENSG00000112655|Q13308-3|PTK7;nc|ENSG00000112655|Q13308-4|PTK7;nc|ENSG00000112655|Q13308-2|PTK7;ENSG00000112655|ENST00000230419|PTK7;nc|ENSG00000112655|Q13308-6|PTK7	chr6:43158968-43160721|23|22.43|0.24|6.56|+|2|PTK7,PTK7|1	chr6:43158968-43160721|23|22.43|0.24|6.56|+|2|PTK7,PTK7|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.7549743652344	2	420.756144	839.497735	0.18337	7.7154E-05	-2.3767	-0.001	-2.1933	-0.00092286	420.7550318985828	22.352	1.7415	21.741	20.512	22.253	-0.6107					82	43	2	0	0	0	0.80706	1	901	901		19.36	1.0356	1	550570			44402	479	29705	29718	50278	50278					0.07156641682752252
QAGSPEIPAPN	11	Unmodified	_QAGSPEIPAPN_					0	0	0		ENST00000266458.9_1_12:10365411-10365633:+|nuORF	ENST00000266458.9_1_12:10365411-10365633:+|nuORF	ENST00000266458.9_1_12:10365411-10365633:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.7665405273438	2	540.769645	1079.52474	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.127	1	24.084	23.584	24.584	-0.043221								0	0	0	0.56276	1	852	852		47.96	1.9873	1				44403	9521	29706	29719	50279	50279					-0.011843392873743142
QAGTKRIQLS	10	Unmodified	_QAGTKRIQLS_					0	0	0			REV__nc|ENSG00000148120|Q8N6M6-3|AOPEP	REV__nc|ENSG00000148120|Q8N6M6-3|AOPEP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.3215942382812	2	551.32238	1100.63021	-0.57748	-0.00031838	0.9648	0.00053191	0.38732	0.00021354	551.32297252947	34.454	0.51962	34.449	34.174	34.693	-0.0047417					18	12	2	0	0	0	0.82886	1	2071	2071		37.812	2.1932	1	56015	+		44404	20096	29707	29720	50280	50280					0.08391621628902612
QAHELKALLNF	11	Unmodified	_QAHELKALLNF_					0	0	0			REV__nc|ENSG00000140481|Q8N5R6|CCDC33	REV__nc|ENSG00000140481|Q8N5R6|CCDC33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3631591796875	2	642.358962	1282.70337	7.1448	0.0045895	-2.0976	-0.0013474	5.0473	0.0032422	642.3585751725324	110.49	1.1397	110.55	110.17	111.3	0.058884					162	41	4	0	0	0	0.39037	2	13433	13433;13495		60.118	15.741	1	2259100	+		44405	29891	29708	29721	50281;50282	50281					0.0733275035152019
QAIAPVIL	8	Unmodified	_QAIAPVIL_					0	0	0			REV__ENST00000366847.8_1_6:167446117-167447391:+|nuORF	REV__ENST00000366847.8_1_6:167446117-167447391:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7673034667969	2	412.765646	823.516739	-1.8992	-0.00078392	4.1525	0.001714	2.2533	0.0009301	412.76765198426614	41.794	3.0272	41.798	40.935	43.962	0.0043983					161	84	4	0	0	0	0.88915	1	2865	2865		35.201	0	1	640430	+		44406	25538	29709	29722	50283	50283					0.09792178253815109
QAIPVRLKILL	11	Unmodified	_QAIPVRLKILL_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.4307861328125	2	632.42919	1262.84383	-0.021077	-1.333E-05	1.2003	0.0007591	1.1792	0.00074577	632.4296452184271	108.26	0.70177	108.26	107.96	108.66	0					68	33	3	0	0	0	0.80516	1	11268	11268		10.265	0	1	3975500			44407	6508	29710	29723	50284	50284					0.22291954075762987
QAIPVRLKILL	11	Unmodified	_QAIPVRLKILL_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	632.429931640625	2	632.42919	1262.84383	-0.16111	-0.00010189	1.4498	0.00091687	1.2887	0.00081498	632.4298123182796	108.36	0.78529	108.31	108.01	108.8	-0.042404					66	29	3	0	0	0	0.77937	1	11788	11788		15.642	4.7763	1	4385300			44408	6508	29710	29723	50285	50285					0.22291954075762987
QAIPVRLKILL	11	Unmodified	_QAIPVRLKILL_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	632.4266967773438	2	632.42919	1262.84383	2.8292	0.0017893	-1.6155	-0.0010217	1.2137	0.0007676	632.4278485771309	108.34	0.724	108.31	108	108.72	-0.031487					56	31	3	0	0	0	0.75495	1	11995	11995		20.947	5.3051	1	2849900			44409	6508	29710	29723	50286	50286					0.22291954075762987
QAIPVRLKILL	11	Unmodified	_QAIPVRLKILL_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.4253540039062	2	632.42919	1262.84383	1.461	0.00092401	-0.48958	-0.00030962	0.97147	0.00061438	632.4287200366232	108.38	0.64588	108.51	108.19	108.83	0.13026					29	17	2	0	0	0	0.78309	1	11629	11629		14.865	8.5522	1	3788100			44410	6508	29710	29723	50287	50287					0.22291954075762987
QAIPVRLKILL	11	Unmodified	_QAIPVRLKILL_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	632.4276123046875	2	632.42919	1262.84383	0.93178	0.00058929	0.55639	0.00035188	1.4882	0.00094116	632.42931035688	109.94	0.80294	110.01	109.81	110.61	0.073685					73	27	3	0	0	0	0.18136	1	11787	11787		9.1829	0	1	7779600			44411	6508	29710	29723	50288	50288					0.22291954075762987
QAIPVRLKILL	11	Unmodified	_QAIPVRLKILL_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	632.42919	1262.84383	-0.16063	-0.00010159	2.417	0.0015286	2.2564	0.001427	632.4305886211561	109.86	0.30002	109.81	109.7	110	-0.055077	-0.13198	0.0045025	NaN	9.1829	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4582700			44412	6508	29710	29723							0.22291954075762987
QAIPVRLKILL	11	Unmodified	_QAIPVRLKILL_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	632.42919	1262.84383	2.8304	0.00179	-0.97565	-0.00061703	1.8547	0.001173	632.4284787366372	109.82	0.6746	109.79	109.6	110.28	-0.027634	-0.144	0.00021122	NaN	9.1829	43	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	535410			44413	6508	29710	29723							0.22291954075762987
QAIPVRLKILL	11	Unmodified	_QAIPVRLKILL_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	632.42919	1262.84383	1.2223	0.00077299	0.91317	0.00057751	2.1354	0.0013505	632.4295802892005	109.9	0.51932	109.93	109.69	110.21	0.033096	-0.0070534	0.0026003	NaN	9.1829	45	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	717210			44414	6508	29710	29723							0.22291954075762987
QAIPVRLKILL	11	Unmodified	_QAIPVRLKILL_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	632.42919	1262.84383	1.4625	0.00092494	0.26374	0.0001668	1.7263	0.0010917	632.4290749625486	109.97	1.0949	110.09	109.45	110.55	0.1229	0.15198	0.0017789	NaN	9.1829	123	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9073500			44415	6508	29710	29723							0.22291954075762987
QAKFKLPSL	9	Unmodified	_QAKFKLPSL_					0	0	0			REV__ENSG00000277972|ENST00000613478|CISD3	REV__ENSG00000277972|ENST00000613478|CISD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3145751953125	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12518	12518		23.042	0	1	4038100	+		44416	24028	29711	29724	50289	50289					0.10343210236646883
QAKKHLEFRQ	10	Unmodified	_QAKKHLEFRQ_					0	0	0			REV__ENSG00000172081|ENST00000357066|MOB3A	REV__ENSG00000172081|ENST00000357066|MOB3A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.3637084960938	2	642.862203	1283.70985	-1.1486	-0.00073841	2.8819	0.0018527	1.7333	0.0011142	643.3644778828412	111.11	0.32581	111.11	110.9	111.23	-0.0074463					35	13	3	0	0	0	0.37624	1	11831	11831		26.693	7.5894	1	303500	+		44417	21801	29712	29725	50290	50290					0.07934688302884751
QAKKKGPVCIK	11	Unmodified	_QAKKKGPVCIK_					0	0	0			REV__nc|ENSG00000075292|Q14966-3|ZNF638	REV__nc|ENSG00000075292|Q14966-3|ZNF638	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5833435058594	3	400.581276	1198.722	2.8195	0.0011294	3.9951	0.0016003	6.8145	0.0027298	400.58284711593865	24.711	0.82143	24.674	24.297	25.118	-0.037178					47	17	3	0	0	0	0.74022	1	913	913		24.232	0.85391	1	68143	+		44418	16707	29713	29726	50291	50291					0.13058588721719389
QAKKKGPVCIK	11	Unmodified	_QAKKKGPVCIK_					0	0	0			REV__nc|ENSG00000075292|Q14966-3|ZNF638	REV__nc|ENSG00000075292|Q14966-3|ZNF638	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.58026123046875	3	400.581276	1198.722	-0.13625	-5.4579E-05	-1.9973	-0.00080009	-2.1336	-0.00085467	400.5803754100224	20.669	0.84843	20.039	19.673	20.521	-0.6296					51	20	4	0	0	0	0.67762	1	687	687		35.178	0.026198	1	284940	+		44419	16707	29713	29726	50292	50292					0.13058588721719389
QAKLKKMHN	9	Unmodified	_QAKLKKMHN_					0	0	0		nc|ENSG00000111913|Q9Y4F9|RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2	nc|ENSG00000111913|Q9Y4F9|RIPOR2	nc|ENSG00000111913|Q9Y4F9|RIPOR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.317626953125	2	549.316043	1096.61753	0.85079	0.00046735	2.0297	0.0011149	2.8804	0.0015823	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.78536	1	10533	10533		29.15	2.4566	1	2023500			44420	2625	29714	29727	50293	50293					0.07308886965006423
QAKLKRLQV	9	Unmodified	_QAKLKRLQV_					0	0	0			REV__ENSG00000139537|ENST00000320516|CCDC65	REV__ENSG00000139537|ENST00000320516|CCDC65	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.3192749023438	2	542.353483	1082.69241	2.1562	0.0011694	-2.9424	-0.0015958	-0.7862	-0.0004264	542.3517764071204	25.992	0.60575	25.561	25.354	25.96	-0.4311					29	13	3	0	0	0	0.20789	1	1416	1416		34.173	0	1	235900	+		44421	19547	29715	29728	50294	50294					0.1543739276787619
QAKNQIKHLK	10	Unmodified	_QAKNQIKHLK_					0	0	0			REV__nc|ENSG00000102387|Q5H9L4-3|TAF7L	REV__nc|ENSG00000102387|Q5H9L4-3|TAF7L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3658447265625	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.86718	1	12960	12960		27.882	4.3595	1	3346600	+		44422	17339	29716	29729	50295	50295					0.12459876308253115
QAKQESTEY	9	Unmodified	_QAKQESTEY_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.25146484375	2	542.251286	1082.48802	-0.34994	-0.00018975	0.047222	2.5606E-05	-0.30272	-0.00016415	542.2512301114573	21.414	0.66617	20.785	20.522	21.188	-0.62834					34	16	3	0	0	0	0.6204	1	779	779		45.972	1.8554	1	246390			44423	869	29717	29730	50296	50296					-0.04992635903954579
QAKRLRTR	8	Unmodified	_QAKRLRTR_					0	0	0			REV__ENST00000520481.1_1_8:28304597-28321161:-|nuORF	REV__ENST00000520481.1_1_8:28304597-28321161:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.8256225585938	2	514.825424	1027.63629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.878	1	16.955	16.455	17.455	0.07715								0	0	0	0.29344	1	146	146		31.955	7.4357	1		+		44424	23646	29718	29731	50297	50297					0.12358184651088777
QAKYILKDS	9	Unmodified	_QAKYILKDS_					0	0	0		ENSG00000009724|ENST00000400897|MASP2	ENSG00000009724|ENST00000400897|MASP2	ENSG00000009724|ENST00000400897|MASP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.8013305664062	2	533.300581	1064.58661	-0.46862	-0.00024992	0.32551	0.00017359	-0.14311	-7.6322E-05	533.3007266349649	31.256	2.7034	31.336	29.971	32.674	0.079834					123	61	4	0	0	0	0.76255	1	2158	2158		35.618	0.41757	1	663570			44425	756	29719	29732	50298	50298					0.05690012131753974
QALEKSLRA	9	Unmodified	_QALEKSLRA_					0	0	0			REV__ENST00000494080.5_1_11:64109984-64120281:+|nuORF	REV__ENST00000494080.5_1_11:64109984-64120281:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2977600097656	2	508.298373	1014.58219	0.94658	0.00048115	-1.0956	-0.00055691	-0.14905	-7.5763E-05	508.2975110475495	30.244	0.69923	30.154	29.917	30.616	-0.089544					37	15	3	0	0	0	0.33718	1	1994	1994		62.107	1.9892	1	1237100	+		44426	27710	29720	29733	50299	50299					0.07548547708859132
QALIDGSREGF	11	Unmodified	_QALIDGSREGF_					0	0	0		ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-3|CBLB;nc|ENSG00000114423|Q13191-2|CBLB	ENSG00000114423|ENST00000394030|CBLB	ENSG00000114423|ENST00000394030|CBLB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.7968139648438	2	596.801477	1191.5884	-0.38196	-0.00022795	-1.0908	-0.000651	-1.4728	-0.00087896	596.8002998226716	27.856	0.85773	27.759	27.403	28.261	-0.096947					49	19	4	0	0	0	0.72106	1	1685	1685		28.081	1.3886	1	699260			44427	2769	29721	29734	50300	50300					0.00027021149730899197
QALIQVIAKIT	11	Unmodified	_QALIQVIAKIT_					0	0	0		ENSG00000204764|ENST00000523189|RANBP17;ENST00000523727.1_1_5:170308890-170323149:+|nuORF;ENST00000519130.5_1_5:170289037-170336799:+|nuORF;nc|ENSG00000204764|Q9H2T7-2|RANBP17;ENST00000443155.5_1_5:170288887-170338173:+|nuORF	ENSG00000204764|ENST00000523189|RANBP17;ENST00000443155.5_1_5:170288887-170338173:+|nuORF	ENSG00000204764|ENST00000523189|RANBP17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.3781127929688	2	599.381906	1196.74926	-0.54345	-0.00032574	-2.532	-0.0015176	-3.0754	-0.0018434	599.3802252506414	103.57	3.0198	103.57	103.18	106.2	-0.0035782					175	72	5	0	0	0	0.76699	1	11100	11100		18.262	0	1	11998000			44428	8486;11801	29722	29735	50301	50301					0.15875395533748815
QALITQAKQ	9	Unmodified	_QALITQAKQ_					0	0	0			REV__ENSG00000185974|ENST00000335678|GRK1	REV__ENSG00000185974|ENST00000335678|GRK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.7936706542969	2	500.792924	999.571294	0.10713	5.3649E-05	0.15542	7.7832E-05	0.26255	0.00013148	500.79274110687714	18.637	0.57257	18.16	17.983	18.556	-0.47694					19	12	3	0	0	0	0.33718	1	414	414		62.107	20.681	1	194030	+		44429	22816	29723	29736	50302	50302					0.07149145334562945
QALITQAKQ	9	Unmodified	_QALITQAKQ_					0	0	0			REV__ENSG00000185974|ENST00000335678|GRK1	REV__ENSG00000185974|ENST00000335678|GRK1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	500.792924	999.571294	0.10713	5.3649E-05	0.15542	7.7832E-05	0.26255	0.00013148	500.79274110687714	18.637	0.57257	18.16	17.983	18.556	-0.47694	-0.0061068	0.00017089	NaN	62.107	19	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	194030	+		44430	22816	29723	29736							0.07149145334562945
QALKSVVLYV	10	Unmodified	_QALKSVVLYV_					0	0	0		ENSG00000197170|ENST00000356126|PSMD12;nc|ENSG00000197170|O00232-2|PSMD12;ENST00000584289.5_1_17:65341859-65362635:-|nuORF	ENSG00000197170|ENST00000356126|PSMD12	ENSG00000197170|ENST00000356126|PSMD12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.341064453125	2	560.342249	1118.66995	0.37477	0.00021	-4.1195	-0.0023083	-3.7447	-0.0020983	560.3398544470892	89.255	3.3389	89.463	87.161	90.5	0.2073					181	78	4	0	0	0	0.70553	1	8888	8888		44.377	3.599	1	715790			44431	8145	29724	29737	50303	50303					0.11535748579603933
QALLAGLFA	9	Unmodified	_QALLAGLFA_					0	0	0		ENSG00000160951|ENST00000292513|PTGER1	ENSG00000160951|ENST00000292513|PTGER1	ENSG00000160951|ENST00000292513|PTGER1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.2491760253906	2	452.268553	902.522553	-0.33634	-0.00015212	-3.3772	-0.0015274	-3.7135	-0.0016795	452.26646007543906	23.723	0.33246	23.671	23.457	23.79	-0.052114					10	8	2	0	0	0	0.20789	1	876	876		19.36	5.9059	1	8116.4			44432	5617	29725	29738	50304	50304					0.06739276765483737
QALLYKKII	9	Unmodified	_QALLYKKII_					0	0	0		ENSG00000109272|ENST00000226524|PF4V1	ENSG00000109272|ENST00000226524|PF4V1	ENSG00000109272|ENST00000226524|PF4V1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3555908203125	2	545.35516	1088.69577	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.063	1	23.065	22.565	23.565	0.0018959								0	0	0	0.32159	1	712	712		23.042	5.6775	1				44433	2457	29726	29739	50305	50305					0.1549664282190406
QALQDGILETR	11	Unmodified	_QALQDGILETR_					0	0	0			REV__ENSG00000166189|ENST00000299238|HPS6	REV__ENSG00000166189|ENST00000299238|HPS6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.22576904296875	3	415.226215	1242.65681	1.8471	0.00076696	-2.9213	-0.001213	-1.0742	-0.00044604	415.2246933890348	26.889	0.89677	26.548	26.096	26.992	-0.34035					67	19	6	0	0	0	0.70847	1	1545	1545		30.139	5.0132	1	829090	+		44434	21265	29727	29740	50306	50306					0.04519265729572908
QALRFEELL	9	Unmodified	_QALRFEELL_					0	0	0		nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-3|YY1AP1;ENSG00000163374|ENST00000355499|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;ENST00000496324.5_1_1:155642327-155650230:-|nuORF	nc|ENSG00000163374|Q9H869-6|YY1AP1	nc|ENSG00000163374|Q9H869-6|YY1AP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2753295898438	2	559.813856	1117.61316	0.64166	0.00035921	-1.0284	-0.00057572	-0.38676	-0.00021651	559.8130604606066	57.188	1.0336	57.743	57.397	58.43	0.55513					45	24	3	0	0	0	0.20789	1	5955	5955		53.351	25.469	1	899380			44435	5789	29728	29741	50307	50307					0.05905701023107213
QALRLLLAW	9	Unmodified	_QALRLLLAW_					0	0	0			REV__nc|ENSG00000015520|Q9UHC9-3|NPC1L1	REV__nc|ENSG00000015520|Q9UHC9-3|NPC1L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.31884765625	2	542.337301	1082.66005	2.1773	0.0011809	-2.0165	-0.0010936	0.16081	8.7214E-05	542.3365198294852	26.01	0.172	25.578	25.439	25.611	-0.4311					5	3	2	0	0	0	0.20789	1	1382	1382		38.806	1.647	1	26860	+		44436	16210	29729	29742	50308	50308					0.12202605364882402
QALRSNRF	8	Unmodified	_QALRSNRF_					0	0	0			REV__ENST00000498792.1_1_3:120025975-120026458:+|nuORF	REV__ENST00000498792.1_1_3:120025975-120026458:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.26513671875	2	496.275232	990.535912	-0.27664	-0.00013729	2.9484	0.0014632	2.6718	0.0013259	496.2765471040174	77.31	0.63611	77.715	77.465	78.101	0.40531					39	14	4	0	0	0	0.4196	1	8813	8813		37.159	0	1	1018000	+		44437	27794	29730	29743	50309	50309					0.040265275974206816
QALSAAAAAPK	11	Unmodified	_QALSAAAAAPK_					0	0	0			REV__ENST00000390687.8_1_15:25200095-25200161:+|nuORF	REV__ENST00000390687.8_1_15:25200095-25200161:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.78350830078125	2	499.785099	997.555644	0.19483	9.7372E-05	-0.077136	-3.8551E-05	0.11769	5.8821E-05	499.7848899296981	22.078	1.1524	21.635	21.19	22.342	-0.44324					54	25	4	0	0	0	0.48313	1	840	840		53.089	7.1167	1	243250	+		44438	26003	29731	29744	50310	50310					0.056768588175032164
QALTLVFDD	9	Unmodified	_QALTLVFDD_					0	0	0		ENSG00000010322|ENST00000345716|NISCH;nc|ENSG00000010322|Q9Y2I1-2|NISCH	ENSG00000010322|ENST00000345716|NISCH	ENSG00000010322|ENST00000345716|NISCH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2920837402344	2	511.263665	1020.51278	0.34672	0.00017726	-1.1743	-0.00060037	-0.82757	-0.00042311	511.26315792103696	52.961	0.53573	53.575	53.366	53.902	0.61436					18	12	2	0	0	0	0.20789	1	5376	5376		51.193	17.02	1	329760			44439	767	29732	29745	50311	50311					0.003340439694284214
QAMAKLVI	8	Unmodified	_QAMAKLVI_					0	0	0			REV__nc|ENSG00000196357|Q8N9K5|ZNF565	REV__nc|ENSG00000196357|Q8N9K5|ZNF565	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2655029296875	2	437.264956	872.515359	-0.37471	-0.00016385	2.1781	0.00095241	1.8034	0.00078857	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.79929	1	822	822		18.324	0.95945	1	970200	+		44440	30129	29733	29746	50312	50312					0.07400220893384812
QAMEQLQLQ	9	Unmodified	_QAMEQLQLQ_					0	0	0			REV__ENSG00000130783|ENST00000253079|CCDC62	REV__ENSG00000130783|ENST00000253079|CCDC62	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.7724609375	2	544.773874	1087.53319	-0.54836	-0.00029873	-2.792	-0.001521	-3.3404	-0.0018198	544.7722169969999	26.229	0.57865	25.972	25.726	26.304	-0.2572					31	12	3	0	0	0	0.39367	1	1406	1406		58.23	5.141	1	385930	+		44441	18909	29734	29747	50313	50313					-0.00707108642404819
QAMLLVVAV	9	Unmodified	_QAMLLVVAV_					0	0	0		nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.288818359375	2	472.285889	942.557224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.58	1	118.55	118.05	119.05	-0.024208								0	0	0	0.31828	1	13136	13136		24.203	1.1603	1				44442	15348	29735	29748	50314	50314					0.08364776581913702
QAPPCAPLH	9	Unmodified	_QAPPCAPLH_					0	0	0			REV__ENST00000263642.2_1_2:163174974-163175085:-|nuORF	REV__ENST00000263642.2_1_2:163174974-163175085:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.23406982421875	2	467.234187	932.453822	-0.82332	-0.00038468	-1.5441	-0.00072147	-2.3674	-0.0011061	467.2334921608077	63.726	1.0387	64.113	63.444	64.483	0.38681					60	23	4	0	0	0	0.78851	1	6870	6870		28.254	1.4582	1	272720	+		44443	24453	29736	29749	50315	50315					-0.015107108058941776
QAPYIPSTD	9	Unmodified	_QAPYIPSTD_					0	0	0		nc|ENSG00000266412|Q13772-4|NCOA4;nc|ENSG00000266412|Q13772-2|NCOA4;ENSG00000266412|ENST00000581486|NCOA4;nc|ENSG00000266412|Q13772-3|NCOA4	nc|ENSG00000266412|Q13772-4|NCOA4	nc|ENSG00000266412|Q13772-4|NCOA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.2375793457031	2	496.24019	990.465826	-1.3435	-0.00066668	-2.8339	-0.0014063	-4.1774	-0.002073	496.23868570674875	31.024	1.2712	31.103	30.457	31.728	0.079834					63	28	4	0	0	0	0.28163	1	2091	2091		66.429	2.222	1	1668700			44444	15308	29737	29750	50316	50316					-0.02978815581730032
QAQGPRKG	8	Unmodified	_QAQGPRKG_					0	0	0			REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10	REV__nc|ENSG00000157637|Q9HBR0-2|SLC38A10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.7041320800781	2	421.235576	840.456599	0.14538	6.124E-05	3.9084	0.0016463	4.0537	0.0017076	421.23724140071533	35.26	1.2915	35.366	35.2	36.492	0.10604					52	41	2	0	0	0	0.4196	1	1942	1942		11.511	0.64546	1	107770	+		44445	29953	29738	29751	50317	50317					0.029988806432811543
QAQPWGAPV	9	Unmodified	_QAQPWGAPV_					0	0	0		nc|ENSG00000077782|P11362-21|FGFR1;ENSG00000077782|ENST00000447712|FGFR1;nc|ENSG00000077782|P11362-19|FGFR1;nc|ENSG00000077782|P11362-2|FGFR1;nc|ENSG00000077782|P11362-7|FGFR1;nc|ENSG00000077782|P11362-8|FGFR1;nc|ENSG00000077782|P11362-9|FGFR1;ENST00000397090.4_1_8:38287194-38314994:-|nuORF;nc|ENSG00000077782|P11362-15|FGFR1	nc|ENSG00000077782|P11362-21|FGFR1	nc|ENSG00000077782|P11362-21|FGFR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2465515136719	2	477.245609	952.476666	0.42784	0.00020419	1.5249	0.00072774	1.9527	0.00093193	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.5393	2	7044	7044;7110		50.025	7.5501	1	2278400			44446	1386	29739	29752	50318;50319	50318					-0.0014736841676494805
QAQPWGAPV	9	Unmodified	_QAQPWGAPV_					0	0	0		nc|ENSG00000077782|P11362-21|FGFR1;ENSG00000077782|ENST00000447712|FGFR1;nc|ENSG00000077782|P11362-19|FGFR1;nc|ENSG00000077782|P11362-2|FGFR1;nc|ENSG00000077782|P11362-7|FGFR1;nc|ENSG00000077782|P11362-8|FGFR1;nc|ENSG00000077782|P11362-9|FGFR1;ENST00000397090.4_1_8:38287194-38314994:-|nuORF;nc|ENSG00000077782|P11362-15|FGFR1	nc|ENSG00000077782|P11362-21|FGFR1	nc|ENSG00000077782|P11362-21|FGFR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2465515136719	2	477.245609	952.476666	-0.88369	-0.00042174	2.6697	0.0012741	1.786	0.00085235	477.24693641483543	64.828	2.6891	65.382	64.729	67.418	0.55386					152	75	5	0	0	0	0.5393	1	7022	7022		50.025	2.1089	1	2295100			44447	1386	29739	29752	50320	50320					-0.0014736841676494805
QAQRDQSSGE	10	Unmodified	_QAQRDQSSGE_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.2484130859375	2	553.247066	1104.47958	-0.23711	-0.00013118	3.8419	0.0021255	3.6048	0.0019944	553.2490708217814	36.264	1.0362	36.208	35.834	36.87	-0.055901					55	22	4	0	0	0	0.5442	1	2438	2438		53.089	7.137	1	806210	+		44448	18751	29740	29753	50321	50321					-0.06848189820539119
QAQRHSLIGH	10	Unmodified	_QAQRHSLIGH_					0	0	0			REV__ENST00000607283.5_1_3:53077257-53126395:-|nuORF	REV__ENST00000607283.5_1_3:53077257-53126395:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.816162109375	2	573.809971	1145.60539	-0.75689	-0.00043431	3.1499	0.0018074	2.393	0.0013731	573.8114221641347	31.175	0.43206	31.193	31	31.432	0.018362					15	9	2	0	0	0	0.8545	1	1661	1661		36.447	2.2742	1	31375	+		44449	29383	29741	29754	50322	50322					0.03840986546174463
QAQSPIQQLDL	11	Unmodified	_QAQSPIQQLDL_					0	0	0		ENSG00000087095|ENST00000407008|NLK	ENSG00000087095|ENST00000407008|NLK	ENSG00000087095|ENST00000407008|NLK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	620.8327026367188	2	620.830234	1239.64592	-0.51033	-0.00031683	3.0637	0.001902	2.5534	0.0015852	620.8322011425744	61.29	0.6341	61.679	61.505	62.139	0.38945					46	16	4	0	0	0	0.3308	1	6535	6535		66.962	5.99	1	633710			44450	1567	29742	29755	50323	50323					0.035678633553061445
QARAVKVLTE	10	Unmodified	_QARAVKVLTE_					0	0	0		ENSG00000187609|ENST00000340951|EXD3;ENST00000475006.1_1_9:140262369-140269195:-|nuORF;nc|ENSG00000187609|Q8N9H8-4|EXD3	ENSG00000187609|ENST00000340951|EXD3	ENSG00000187609|ENST00000340951|EXD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.8323974609375	2	557.83258	1113.65061	0.055659	3.1049E-05	-0.17644	-9.8421E-05	-0.12078	-6.7373E-05	557.8323863083609	20.23	0.34261	20.301	20.141	20.484	0.071127					22	13	2	0	0	0	0.86272	1	468	468		24.519	2.5593	1	80845			44451	7865	29743	29756	50324	50324					0.09832792288671044
QARSRKTLS	9	Unmodified	_QARSRKTLS_					0	0	0			REV__ENST00000554756.1_1_14:24805383-24807435:-|nuORF	REV__ENST00000554756.1_1_14:24805383-24807435:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2796630859375	2	523.806897	1045.59924	-0.62153	-0.00032556	2.609	0.0013666	1.9875	0.001041	523.8080540696658	46.098	0.39708	46.993	46.767	47.164	0.89542					15	9	2	0	0	0	0.20789	1	4342	4342		49.536	15.364	1	555000	+		44452	18821	29744	29757	50325	50325					0.0782646831466991
QARSRTRLRLP	11	Unmodified	_QARSRTRLRLP_					0	0	0			REV__ENST00000417456.1_1_1:35441975-35442986:-|nuORF	REV__ENST00000417456.1_1_1:35441975-35442986:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.27850341796875	3	451.944376	1352.8113	-1.6541	-0.00074756	-0.56472	-0.00025522	-2.2188	-0.0010028	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.77511	1	4652	4652		16.53	1.1924	1	430100	+		44453	26443	29745	29758	50326	50326					0.14900559725447238
QASDVSVKY	9	Unmodified	_QASDVSVKY_					0	0	0		ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR	ENSG00000047410|ENST00000367478|TPR	ENSG00000047410|ENST00000367478|TPR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.7535095214844	2	498.753464	995.492375	-0.0081568	-4.0683E-06	0.30186	0.00015056	0.29371	0.00014649	498.753380544157	35.972	1.0209	36.224	35.673	36.694	0.25219					63	25	4	0	0	0	0.30689	1	2794	2794		64.207	0.901	1	2266800			44454	960	29746	29759	50327	50327					-0.0055512669038080276
QASDVSVKY	9	Unmodified	_QASDVSVKY_					0	0	0		ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR	ENSG00000047410|ENST00000367478|TPR	ENSG00000047410|ENST00000367478|TPR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.7530822753906	2	498.753464	995.492375	1.4332	0.00071481	-1.2597	-0.00062827	0.17351	8.6536E-05	498.75268932975655	35.92	0.58378	36.361	36.074	36.658	0.44043					41	14	4	0	0	0	0.30689	2	2795	2795;2805		64.207	10.856	1	2284800			44455	960	29746	29759	50328;50329	50328					-0.0055512669038080276
QASKPDVISRL	11	Unmodified	_QASKPDVISRL_					0	0	0		ENST00000528392.5_2_8:146219922-146225127:-|nuORF;ENST00000427606.2_1_8:146219922-146220138:-|nuORF	ENST00000528392.5_2_8:146219922-146225127:-|nuORF	ENST00000528392.5_2_8:146219922-146225127:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	607.349365234375	2	607.348594	1212.68264	-1.2176	-0.00073953	1.0333	0.00062755	-0.18438	-0.00011198	607.349208826232	30.097	0.60465	30.097	29.793	30.397	0					41	18	3	0	0	0	0.72106	1	1356	1356		28.081	0.19925	1	105210			44456	11580	29747	29760	50330	50330					0.08480159971850298
QASVHSTH	8	Unmodified	_QASVHSTH_					0	0	0			REV__nc|ENSG00000136758|Q96TA2-3|YME1L1	REV__nc|ENSG00000136758|Q96TA2-3|YME1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.70941162109375	2	433.709391	865.404229	-0.4049	-0.00017561	0.73237	0.00031764	0.32747	0.00014203	433.7095747053112	18.885	1.2564	18.812	18.502	19.759	-0.073704					78	36	3	0	0	0	0.47906	1	360	360		76.847	0.072494	1	1229300	+		44457	19332	29748	29761	50331	50331					-0.033857024903227284
QATLVTLIACK	11	Unmodified	_QATLVTLIACK_					0	0	0			REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	580.8411254882812	2	580.839017	1159.66348	-0.77465	-0.00044995	3.5649	0.0020706	2.7902	0.0016207	580.8409079649531	69.999	0.8299	69.999	69.758	70.588	0					106	43	3	0	0	0	0.732	1	6239	6239		26.063	0.48933	1	7674300	+		44458	20873	29749	29762	50332	50332					0.09003487356585538
QATLVTLIACK	11	Unmodified	_QATLVTLIACK_					0	0	0			REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	REV__nc|ENSG00000163026|Q9H6R7-2|WDCP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.8409423828125	2	580.839017	1159.66348	-0.43283	-0.00025141	3.0566	0.0017754	2.6237	0.001524	580.8405993802119	69.859	0.92783	69.822	69.57	70.498	-0.036957					124	48	3	0	0	0	0.77061	1	6791	6791		17.468	0.10304	1	18374000	+		44459	20873	29749	29762	50333	50333					0.09003487356585538
QAVKSSTKRNL	11	Unmodified	_QAVKSSTKRNL_					0	0	0			REV__nc|ENSG00000117305|P35914-3|HMGCL	REV__nc|ENSG00000117305|P35914-3|HMGCL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	411.57763671875	3	411.242088	1230.70443	2.7172	0.0011174	0.95472	0.00039262	3.6719	0.0015101	411.2422057573565	103.06	0.41344	103.01	102.83	103.24	-0.047005					16	9	2	0	0	0	0.75121	1	11268	11268		21.78	0.094677	1	859060	+		44460	18255	29750	29763	50334	50334					0.09830964720435986
QAVLRQLLRLL	11	Unmodified	_QAVLRQLLRLL_					0	0	0		ENSG00000160951|ENST00000292513|PTGER1	ENSG00000160951|ENST00000292513|PTGER1	ENSG00000160951|ENST00000292513|PTGER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.6258239746094	3	441.625873	1321.85579	0.58341	0.00025765	-0.47602	-0.00021022	0.10739	4.7426E-05	441.62561206833976	15.451	0.27005	15.427	15.297	15.567	-0.024207					16	7	3	0	0	0	0.71207	1	37	37		29.551	8.5185	1	188620			44461	5617	29751	29764	50335	50335					0.20773570818914777
QAVLTVQEP	9	Unmodified	_QAVLTVQEP_					0	0	0		nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;ENSG00000065534|ENST00000360304|MYLK	nc|ENSG00000065534|Q15746-4|MYLK	nc|ENSG00000065534|Q15746-4|MYLK	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.77105712890625	2	492.771657	983.528761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.561	1	72.603	72.103	73.103	0.042114								0	0	0	0.28223	1	6985	6985		37.812	2.1932	1				44462	1133	29752	29765	50336	50336					0.03633750206336117
QAVPLRVV	8	Unmodified	_QAVPLRVV_					0	0	0		ENSG00000006071|ENST00000389817|ABCC8;nc|ENSG00000006071|Q09428-2|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.28289794921875	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.676	1	40.63	40.13	41.13	-0.045467								0	0	0	0.30125	1	2594	2594		20.482	0	1				44463	693	29753	29766	50337	50337					0.10438385376653514
QAWCAASPE	9	Carbamidomethyl (C)	_QAWC(Carbamidomethyl (C))AASPE_	QAWC(1)AASPE		QAWC(57)AASPE		0	1	0			REV__ENST00000467751.5_1_1:1019401-1026714:-|nuORF	REV__ENST00000467751.5_1_1:1019401-1026714:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.21319580078125	2	510.216192	1018.41783	-0.1065	-5.4337E-05	3.5845	0.0018289	3.478	0.0017746	510.21786403292356	27.02	0.62769	26.845	26.477	27.105	-0.17559					27	13	3	0	0	0	0.41566	1	1520	1520		56.721	7.2795	1	185400	+		44464	27165	29754	29767	50338	50338	331				-0.09064212773409963
QAWCFVIV	8	Unmodified	_QAWCFVIV_					0	0	0			REV__CON__Q3MHH8	REV__CON__Q3MHH8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.75775146484375	2	483.249306	964.484059	-1.3104	-0.00063324	-2.6361	-0.0012739	-3.9464	-0.0019071	483.2480128771594	38.687	1.0225	39.209	38.911	39.934	0.52235					37	23	2	0	0	0	0.4196	1	3251	3251		13.775	0	1	129540	+	+	44465	16010	29755	29768	50339	50339					0.00039647859296110255
QAWWCVPVV	9	Unmodified	_QAWWCVPVV_					0	0	0		ENST00000542018.5_2_12:69004749-69018568:+|nuORF	ENST00000542018.5_2_12:69004749-69018568:+|nuORF	ENST00000542018.5_2_12:69004749-69018568:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.162109375	2	544.273312	1086.53207	-1.4104	-0.00076764	-0.82054	-0.0004466	-2.2309	-0.0012142	544.2726260335183	44.391	0.43453	45.236	45.067	45.501	0.84438					18	10	2	0	0	0	0.20789	1	4123	4123		25.45	0	1	239070			44466	13520	29756	29769	50340	50340					-0.007732782206630873
QCALLVKV	8	Unmodified	_QCALLVKV_					0	0	0		ENST00000534789.5_1_19:50838046-50840625:-|nuORF	ENST00000534789.5_1_19:50838046-50840625:-|nuORF	ENST00000534789.5_1_19:50838046-50840625:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2656555175781	2	437.264956	872.515359	0.51664	0.00022591	1.2835	0.00056123	1.8001	0.00078714	437.26538540238977	22.419	1.3051	22.41	21.975	23.28	-0.0088234					141	67	4	0	0	0	0.87922	1	661	661		31.955	0	1	1945900			44467	13415	29757	29770	50341	50341					0.07400220893396181
QCALLVKV	8	Unmodified	_QCALLVKV_					0	0	0		ENST00000534789.5_1_19:50838046-50840625:-|nuORF	ENST00000534789.5_1_19:50838046-50840625:-|nuORF	ENST00000534789.5_1_19:50838046-50840625:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2654113769531	2	437.264956	872.515359	0.051124	2.2355E-05	1.2114	0.00052972	1.2626	0.00055208	437.26563820123806	25.538	2.1653	25.281	24.501	26.666	-0.25721					170	48	6	0	0	0	0.91005	1	1294	1294		42.474	0	1	21512000			44468	13415	29757	29770	50342	50342					0.07400220893396181
QCALLVKV	8	Unmodified	_QCALLVKV_					0	0	0		ENST00000534789.5_1_19:50838046-50840625:-|nuORF	ENST00000534789.5_1_19:50838046-50840625:-|nuORF	ENST00000534789.5_1_19:50838046-50840625:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2655944824219	2	437.264956	872.515359	2.8534	0.0012477	-1.6442	-0.00071895	1.2092	0.00052875	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.87479	1	1320	1320		30.504	1.3541	1	21873000			44469	13415	29757	29770	50343	50343					0.07400220893396181
QCCMLVIVF	9	Unmodified	_QCCMLVIVF_					0	0	0		ENST00000367537.7_2_1:183521966-183522155:+|nuORF	ENST00000367537.7_2_1:183521966-183522155:+|nuORF	ENST00000367537.7_2_1:183521966-183522155:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.255859375	2	528.257959	1054.50137	-0.82934	-0.00043811	-3.2407	-0.0017119	-4.07	-0.00215	528.2561335472199	87.909	1.6573	88.373	87.77	89.427	0.46312					96	40	4	0	0	0	0.1538	1	10332	10332		83.287	0.98216	1	2015700			44470	10552	29758	29771	50344	50344					-0.023705159215523963
QCGDFRCPS	9	Unmodified	_QCGDFRCPS_					0	0	0		nc|ENSG00000146839|Q9Y493-5|ZAN;nc|ENSG00000146839|Q9Y493-4|ZAN;nc|ENSG00000146839|Q9Y493-3|ZAN;nc|ENSG00000146839|Q9Y493-6|ZAN;nc|ENSG00000146839|Q9Y493-2|ZAN;ENSG00000146839|ENST00000613979|ZAN;nc|ENSG00000146839|Q9Y493-7|ZAN	nc|ENSG00000146839|Q9Y493-5|ZAN	nc|ENSG00000146839|Q9Y493-5|ZAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.70440673828125	2	506.702394	1011.39024	-0.83233	-0.00042175	3.8154	0.0019333	2.983	0.0015115	506.704211315448	32.544	0.45803	32.543	32.292	32.75	-0.0016365					16	10	2	0	0	0	0.68711	1	1862	1862		41.427	11.109	1	52005			44471	4863	29759	29772	50345	50345					-0.11500439305291366
QCGDQTPQ	8	Unmodified	_QCGDQTPQ_					0	0	0			REV__nc|ENSG00000007372|P26367|PAX6	REV__nc|ENSG00000007372|P26367|PAX6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2633056640625	2	438.679442	875.344331	1.5813	0.00069367	1.1941	0.00052384	2.7754	0.0012175	438.68101669160114	35.287	0.3052	35.668	35.52	35.825	0.3812					10	7	2	0	0	0	0.4196	1	2713	2713		16.007	1.1419	1	34859	+		44472	16122	29760	29773	50346	50346					-0.09832761215875507
QCGESCWGS	9	Unmodified	_QCGESCWGS_					0	0	0			REV__ENSG00000096088|ENST00000373025|PGC	REV__ENSG00000096088|ENST00000373025|PGC	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.6640930175781	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.126	1	71.511	71.011	72.011	0.38449								0	0	0	0.3465	1	7904	7904		15.642	0.0055962	1		+		44473	17074	29761	29774	50347	50347					-0.16304407467623605
QCGPLSTH	8	Unmodified	_QCGPLSTH_					0	0	0			REV__nc|ENSG00000106018|P41587-2|VIPR2	REV__nc|ENSG00000106018|P41587-2|VIPR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.3000793457031	2	421.694895	841.375237	0.85151	0.00035908	2.1067	0.0008884	2.9582	0.0012475	421.6958254154535	87.739	0.6208	88.187	87.933	88.554	0.44777					18	14	2	0	0	0	0.4196	1	10340	10340		40.573	0	1	131090	+		44474	29762	29762	29775	50348	50348					-0.05179563110982599
QCGPTPGP	8	Carbamidomethyl (C)	_QC(Carbamidomethyl (C))GPTPGP_	QC(1)GPTPGP		QC(50)GPTPGP		0	1	0			REV__ENSG00000134058|ENST00000256443|CDK7	REV__ENSG00000134058|ENST00000256443|CDK7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.1849060058594	2	407.18162	812.348688	2.4545	0.00099941	1.62	0.00065963	4.0744	0.001659	407.1826090336494	96.976	1.3902	97.381	97.011	98.402	0.40498					85	33	5	0	0	0	0.92973	1	11690	11690		50.025	7.5501	1	3412500	+		44475	19112	29763	29776	50349	50349	243				-0.06499252002311096
QCIPYHWWYRW	11	Unmodified	_QCIPYHWWYRW_					0	0	0			REV__ENST00000410111.7_1_2:86406577-86422494:-|nuORF	REV__ENST00000410111.7_1_2:86406577-86422494:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.9199829101562	3	546.587201	1636.73977	-0.11886	-6.4966E-05	-3.5257	-0.0019271	-3.6445	-0.0019921	546.5850882852503	23.991	1.2224	23.609	23.108	24.331	-0.38178					55	27	3	0	0	0	0.84494	1	1110	1110		6.3209	0.90796	1	225370	+		44476	26365	29764	29777	50350	50350					-0.0531269602345219
QCLCPQGFQLA	11	Unmodified	_QCLCPQGFQLA_					0	0	0		ENSG00000119681|ENST00000261978|LTBP2	ENSG00000119681|ENST00000261978|LTBP2	ENSG00000119681|ENST00000261978|LTBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.2852783203125	2	604.283551	1206.55255	-0.10714	-6.4745E-05	2.7915	0.0016869	2.6844	0.0016221	604.2851451198585	29.872	0.8398	29.897	29.538	30.377	0.025013					42	21	3	0	0	0	0.7144	1	1510	1510		29.17	0.020503	1	166430			44477	3085	29765	29778	50351	50351					-0.04246475623153856
QCLKMPGP	8	Unmodified	_QCLKMPGP_					0	0	0		ENSG00000047617|ENST00000682330|ANO2;nc|ENSG00000047617|Q9NQ90-2|ANO2;nc|ENSG00000047617|Q9NQ90|ANO2	ENSG00000047617|ENST00000682330|ANO2	ENSG00000047617|ENST00000682330|ANO2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2656555175781	2	437.219691	872.42483	0.28454	0.00012441	1.2446	0.00054418	1.5292	0.00066859	437.2205784253077	24.11	0.25973	23.728	23.491	23.75	-0.38178					7	5	2	0	0	0	0.4196	1	1126	1126		52.299	7.7681	1	43217			44478	964	29766	29779	50352	50352					-0.01648571426540002
QCMEMVQQD	9	Oxidation (M)	_QCM(Oxidation (M))EMVQQD_		QCM(0.5)EM(0.5)VQQD		QCM(0)EM(0)VQQD	0	0	1		ENST00000318220.10_1_1:21771676-21793562:+|nuORF;ENST00000486229.5_1_1:21771673-21794972:+|nuORF	ENST00000318220.10_1_1:21771676-21793562:+|nuORF	ENST00000318220.10_1_1:21771676-21793562:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.2117309570312	2	564.211934	1126.40932	1.0973	0.00061908	-0.91795	-0.00051792	0.1793	0.00010116	564.2112650469574	29.202	0.861	29.029	28.674	29.535	-0.17336					40	19	3	0	0	0	0.41566	1	1856	1856		56.721	17.468	2	1359100			44479	10006	29767	29780	50353	50353		167;168			-0.14883270796553916
QCPACTCSGHA	11	Unmodified	_QCPACTCSGHA_					0	0	0		chr10:115315736-115394659|19|15.58|0.85|4.19|+|2|ATRNL1,ATRNL1|1	chr10:115315736-115394659|19|15.58|0.85|4.19|+|2|ATRNL1,ATRNL1|1	chr10:115315736-115394659|19|15.58|0.85|4.19|+|2|ATRNL1,ATRNL1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.19873046875	2	539.199161	1076.38377	0.58228	0.00031396	-0.64089	-0.00034557	-0.058614	-3.1604E-05	539.1987019875744	33.447	0.75262	33.658	33.313	34.066	0.21168					28	17	2	0	0	0	0.74763	1	2422	2422		22.58	6.1065	1	1098600			44480	63	29768	29781	50354	50354					-0.15136700528319125
QCPRGGLL	8	Unmodified	_QCPRGGLL_					0	0	0		ENST00000372396.3_1_1:44157203-44157976:+|nuORF	ENST00000372396.3_1_1:44157203-44157976:+|nuORF	ENST00000372396.3_1_1:44157203-44157976:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.22821044921875	2	422.228905	842.443257	-1.6383	-0.00069172	-0.9288	-0.00039217	-2.5671	-0.0010839	422.22843886781163	56.746	0.50715	56.746	56.45	56.957	0					41	24	2	0	0	0	0.86288	1	4872	4872		26.796	1.3459	1	414110			44481	10696	29769	29782	50355	50355					0.01573306539683017
QCPRLVAG	8	Unmodified	_QCPRLVAG_					0	0	0			REV__nc|ENSG00000059145|Q9H9P5|UNKL	REV__nc|ENSG00000059145|Q9H9P5|UNKL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.7301025390625	2	422.228905	842.443257	0.33102	0.00013977	-2.5347	-0.0010702	-2.2037	-0.00093047	422.227740126127	56.228	1.0937	56.328	55.393	56.487	0.09919					79	43	2	0	0	0	0.80706	1	4746	4746		19.36	1.0356	1	846200	+		44482	16443	29770	29783	50356	50356					0.015733065396716484
QCRYKILAYLL	11	Unmodified	_QCRYKILAYLL_					0	0	0			REV__ENST00000558084.5_1_7:151880177-151882692:-|nuORF	REV__ENST00000558084.5_1_7:151880177-151882692:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.9483337402344	3	461.932086	1382.77443	-1.7389	-0.00080325	-1.7625	-0.00081417	-3.5014	-0.0016174	461.93099463091744	107.68	0.21223	107.71	107.58	107.79	0.036125					8	4	3	0	0	0	0.17375	1	11504	11504		24.232	5.7008	1	61484	+		44483	28727	29771	29784	50357	50357					0.0983512706466172
QCSGQDGL	8	Unmodified	_QCSGQDGL_					0	0	0			REV__ENST00000395184.5_1_4:86396395-86396566:+|nuORF	REV__ENST00000395184.5_1_4:86396395-86396566:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.17047119140625	2	404.16871	806.322867	-1.318	-0.00053271	4.3696	0.0017661	3.0516	0.0012334	404.1707263168683	78.641	1.8199	78.641	78.235	80.055	0					146	66	5	0	0	0	0.86288	1	7283	7283		26.796	0.10319	1	3046600	+		44484	26101	29772	29785	50358	50358					-0.08804146244597177
QCTTTPPLRLA	11	Unmodified	_QCTTTPPLRLA_					0	0	0			REV__ENSG00000243649|ENST00000425368|CFB	REV__ENSG00000243649|ENST00000425368|CFB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8243408203125	2	600.823898	1199.63324	-0.59314	-0.00035637	1.6155	0.00097062	1.0224	0.00061425	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.72739	1	6778	6778		27.047	0	1	825510	+		44485	23840	29773	29786	50359	50359					0.04141128691412632
QCVILQCT	8	Unmodified	_QCVILQCT_					0	0	0			REV__ENST00000260585.11_1_2:26569100-26611935:+|nuORF	REV__ENST00000260585.11_1_2:26569100-26611935:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.2275085449219	2	454.222431	906.430309	0.17297	7.8566E-05	3.1012	0.0014086	3.2742	0.0014872	454.22436819405397	79.302	2.9696	79.246	78.255	81.225	-0.056297					166	88	3	0	0	0	0.93786	1	8076	8076		53.351	20.539	1	95494	+		44486	19429	29774	29787	50360	50360					-0.026648926347206725
QCYLFLSVD	9	Unmodified	_QCYLFLSVD_					0	0	0		ENST00000494403.2_1_11:47346029-47346842:+|nuORF	ENST00000494403.2_1_11:47346029-47346842:+|nuORF	ENST00000494403.2_1_11:47346029-47346842:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.2604370117188	2	544.260068	1086.50558	3.6614	0.0019927	-1.0749	-0.00058504	2.5864	0.0014077	544.2591897764995	105.37	0.53744	105.56	105.29	105.82	0.18647					25	12	3	0	0	0	0.51307	1	12880	12880		51.335	3.6781	1	236750			44487	12749	29775	29788	50361	50361					-0.034210119026511165
QCYLFLSVD	9	Unmodified	_QCYLFLSVD_					0	0	0		ENST00000494403.2_1_11:47346029-47346842:+|nuORF	ENST00000494403.2_1_11:47346029-47346842:+|nuORF	ENST00000494403.2_1_11:47346029-47346842:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	544.260068	1086.50558	-0.30502	-0.00016601	2.7596	0.0015019	2.4545	0.0013359	544.2614214718083	105.71	0.44276	105.69	105.53	105.97	-0.025146	0.074945	0.0023552	NaN	51.335	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119180			44488	12749	29775	29788							-0.034210119026511165
QCYLFLSVD	9	Unmodified	_QCYLFLSVD_					0	0	0		ENST00000494403.2_1_11:47346029-47346842:+|nuORF	ENST00000494403.2_1_11:47346029-47346842:+|nuORF	ENST00000494403.2_1_11:47346029-47346842:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	544.260068	1086.50558	3.5806	0.0019488	-1.2522	-0.00068153	2.3283	0.0012672	544.2593677752403	105.72	0.53122	105.68	105.37	105.9	-0.03714	0.073101	-0.0020117	NaN	51.335	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84434			44489	12749	29775	29788							-0.034210119026511165
QDAIFRHPP	9	Unmodified	_QDAIFRHPP_					0	0	0			REV__ENSG00000173141|ENST00000309594|MRPL57	REV__ENSG00000173141|ENST00000309594|MRPL57	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.4849243164062	2	540.78289	1079.55123	-1.0339	-0.00055913	-1.7641	-0.000954	-2.798	-0.0015131	540.7816959513904	43.995	0.52929	44.445	44.12	44.649	0.45025					26	12	3	0	0	0	0.20789	1	3969	3969		51.335	17.163	1	725700	+		44490	21892	29776	29789	50362	50362					0.014633943945909778
QDALSTAPLSL	11	Unmodified	_QDALSTAPLSL_					0	0	0			REV__ENSG00000165905|ENST00000401752|LARGE2	REV__ENSG00000165905|ENST00000401752|LARGE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.30078125	2	558.300778	1114.587	-0.26997	-0.00015073	1.5057	0.00084064	1.2357	0.00068992	558.3014243316093	27.942	0.60811	27.845	27.576	28.184	-0.096947					26	13	3	0	0	0	0.7144	1	1658	1658		29.17	0.020503	1	158810	+		44491	21231	29777	29790	50363	50363					0.034293870609417354
QDAQEPPAP	9	Unmodified	_QDAQEPPAP_					0	0	0		ENSG00000122574|ENST00000242140|WIPF3	ENSG00000122574|ENST00000242140|WIPF3	ENSG00000122574|ENST00000242140|WIPF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.6407470703125	2	476.722164	951.429775	-0.90287	-0.00043042	-1.1508	-0.0005486	-2.0536	-0.00097902	476.7211687607614	67.623	0.41821	67.758	67.582	68	0.13521					21	16	2	0	0	0	0.78536	1	6070	6070		29.15	3.5755	1	51741			44492	3233	29778	29791	50364	50364					-0.04788272758582934
QDCMYKDVQ	9	Oxidation (M)	_QDCM(Oxidation (M))YKDVQ_		QDCM(1)YKDVQ		QDCM(55)YKDVQ	0	0	1		ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.23388671875	2	573.233724	1144.45289	-1.144	-0.0006558	1.3065	0.00074894	0.16249	9.3145E-05	573.2343039259655	29.001	1.1207	28.972	28.57	29.691	-0.029207					62	25	3	0	0	0	0.44421	1	1796	1796		54.776	7.119	1	912100			44493	2234	29779	29792	50365	50365		44			-0.11355338027760808
QDDEPEETKR	10	Unmodified	_QDDEPEETKR_					0	0	0		nc|ENSG00000157388|Q01668-3|CACNA1D;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000157388|Q01668-2|CACNA1D	nc|ENSG00000157388|Q01668-3|CACNA1D	nc|ENSG00000157388|Q01668-3|CACNA1D	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.22833251953125	3	416.189718	1245.54732	0.18458	7.6821E-05	-2.1391	-0.00089029	-1.9546	-0.00081347	416.1888489289439	39.826	0.44578	39.915	39.687	40.133	0.088375					17	10	2	0	0	0	0.37624	1	2506	2506		14.694	3.2391	1	85598			44494	5426	29780	29793	50366	50366					-0.0656278468045457
QDDYIDGLEG	10	Unmodified	_QDDYIDGLEG_					0	0	0			REV__ENSG00000105849|ENST00000222567|POLR1F	REV__ENSG00000105849|ENST00000222567|POLR1F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.7411499023438	2	562.740751	1123.46695	-0.77496	-0.0004361	1.9342	0.0010885	1.1593	0.00065236	562.7416349517869	37.282	0.57347	37.294	37.017	37.591	0.011173					28	12	3	0	0	0	0.73395	1	2488	2488		42.864	4.0581	1	159500	+		44495	17573	29781	29794	50367	50367					-0.08984646003477792
QDELAEEIELN	11	Unmodified	_QDELAEEIELN_					0	0	0		ENSG00000179520|ENST00000323346|SLC17A8;nc|ENSG00000179520|Q8NDX2-2|SLC17A8	ENSG00000179520|ENST00000323346|SLC17A8	ENSG00000179520|ENST00000323346|SLC17A8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7800598144531	3	434.873507	1301.59869	0.5425	0.00023592	0.73409	0.00031924	1.2766	0.00055515	434.87409872629945	35.334	0.39777	35.341	35.167	35.565	0.0063896					17	8	3	0	0	0	0.17273	1	2221	2221		17.722	0	1	30918			44496	7275	29782	29795	50368	50368					-0.040044607063464355
QDELLGHV	8	Unmodified	_QDELLGHV_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.7347106933594	2	455.735074	909.455596	-0.28016	-0.00012768	0.7572	0.00034508	0.47704	0.0002174	455.7350341748715	31.996	0.90005	31.945	31.642	32.542	-0.051033					37	19	4	0	0	0	0.86791	1	1839	1839		28.254	1.4582	1	93087	+		44497	17426	29783	29796	50369	50369					-0.0027537851627812415
QDESSEEEEE	10	Unmodified	_QDESSEEEEE_					0	0	0		ENSG00000167721|ENST00000301364|TSR1	ENSG00000167721|ENST00000301364|TSR1	ENSG00000167721|ENST00000301364|TSR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.7163696289062	2	605.715127	1209.4157	0.93312	0.00056521	0.30728	0.00018612	1.2404	0.00075133	605.7150880651593	28.18	0.51201	28.248	28.004	28.516	0.06868					56	25	3	0	0	0	0.85251	1	1148	1148		19.997	0	1	123830			44498	6323	29784	29797	50370	50370					-0.1806305955881271
QDFHRYLLTQL	11	Unmodified	_QDFHRYLLTQL_					0	0	0			REV__ENST00000394628.2_1_10:79492938-79493973:+|nuORF	REV__ENST00000394628.2_1_10:79492938-79493973:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.58782958984375	3	478.589376	1432.7463	-0.06435	-3.0797E-05	-4.4571	-0.0021331	-4.5215	-0.0021639	478.5874879701833	48.705	1.8625	49.165	48.416	50.278	0.45983					145	45	6	0	0	0	0.090841	5	4691	4671;4691;4715;4740;4753		94.82	27.833	1	22356000	+		44499	16693	29785	29798	50371;50372;50373;50374;50375	50372					0.04723520408947479
QDFHRYLLTQL	11	Unmodified	_QDFHRYLLTQL_					0	0	0			REV__ENST00000394628.2_1_10:79492938-79493973:+|nuORF	REV__ENST00000394628.2_1_10:79492938-79493973:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.5875549316406	3	478.589376	1432.7463	-0.82422	-0.00039446	-3.6555	-0.0017495	-4.4797	-0.002144	478.5878634148912	48.525	1.45	49.429	48.963	50.413	0.90424					125	35	5	0	0	0	0.23973	2	4718	4718;4730		77.387	15.221	1	21529000	+		44500	16693	29785	29798	50376;50377	50376					0.04723520408947479
QDFQLQQA	8	Unmodified	_QDFQLQQA_					0	0	0		ENST00000497966.1_1_9:14683698-14690362:-|nuORF;ENST00000380916.8_1_9:14680113-14693400:-|nuORF	ENST00000497966.1_1_9:14683698-14690362:-|nuORF	ENST00000497966.1_1_9:14683698-14690362:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.28125	2	489.237981	976.461409	-0.27799	-0.000136	-2.3478	-0.0011486	-2.6258	-0.0012846	489.23673476164953	61.804	1.337	62.358	61.655	62.992	0.55386					44	31	2	0	0	0	0.4196	1	6636	6636		7.1934	0	1	113980			44501	10940	29786	29799	50378	50378					-0.02776280004616183
QDGASQDHRA	10	Unmodified	_QDGASQDHRA_					0	0	0		ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	542.7388305664062	2	542.741951	1083.46935	0.82326	0.00044682	-4.385	-0.0023799	-3.5617	-0.0019331	542.7395156697249	28.844	0.6699	28.825	28.523	29.193	-0.019405					47	21	3	0	0	0	0.51401	1	1426	1426		54.722	12.326	1	85871			44502	737	29787	29800	50379	50379					-0.0690475275512199
QDGDMHTAD	9	Unmodified	_QDGDMHTAD_					0	0	0			REV__ENSG00000067646|ENST00000155093|ZFY	REV__ENSG00000067646|ENST00000155093|ZFY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	495.1837463378906	2	495.185088	988.355624	-0.57822	-0.00028632	-2.2224	-0.0011005	-2.8006	-0.0013868	495.18382499389435	53.48	0.68114	53.455	53.091	53.772	-0.024754					35	16	3	0	0	0	0.78058	1	4788	4788		30.504	0	1	328790	+		44503	16546	29788	29801	50380	50380					-0.1390198391239892
QDGDRAGH	8	Unmodified	_QDGDRAGH_					0	0	0		ENST00000544283.5_1_2:91823926-91845846:-|nuORF	ENST00000544283.5_1_2:91823926-91845846:-|nuORF	ENST00000544283.5_1_2:91823926-91845846:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.18878173828125	2	428.188823	854.363092	1.4532	0.00062226	-2.4897	-0.0010661	-1.0365	-0.0004438	428.18810074524066	95.137	2.4856	95.57	94.801	97.287	0.4324					110	59	3	0	0	0	0.87479	3	11376	11339;11364;11376		44.117	5.3154	1	1692700			44504	13568	29789	29802	50381;50382;50383	50383					-0.06991463529811881
QDGEKEPPW	9	Unmodified	_QDGEKEPPW_					0	0	0			REV__ENST00000466097.1_1_22:38042800-38046733:+|nuORF	REV__ENST00000466097.1_1_22:38042800-38046733:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.2516479492188	2	543.248546	1084.48254	2.377	0.0012913	1.3091	0.00071119	3.6861	0.0020025	543.2489957909198	25.663	0.76028	25.232	24.851	25.611	-0.4311					35	17	3	0	0	0	0.44529	1	1348	1348		54.722	10.345	1	242040	+		44505	17136	29790	29803	50384	50384					-0.05632314695776586
QDGRIRPV	8	Unmodified	_QDGRIRPV_					0	0	0		ENST00000381781.2_1_19:4891229-4891436:-|nuORF	ENST00000381781.2_1_19:4891229-4891436:-|nuORF	ENST00000381781.2_1_19:4891229-4891436:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7689208984375	2	470.769783	939.525013	-1.6666	-0.00078458	-0.44144	-0.00020782	-2.108	-0.0009924	470.76948436620563	48.56	1.0696	48.56	48.244	49.314	0					49	25	3	0	0	0	0.89494	1	3763	3763		37.159	1.5408	1	317180			44506	10961	29791	29804	50385	50385					0.052831252231385406
QDGYDLTIG	9	Unmodified	_QDGYDLTIG_					0	0	0		ENSG00000198917|ENST00000361256|SPOUT1	ENSG00000198917|ENST00000361256|SPOUT1	ENSG00000198917|ENST00000361256|SPOUT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2711486816406	2	491.229822	980.445091	-0.46886	-0.00023032	0.2424	0.00011907	-0.22646	-0.00011124	491.2299008290513	53.812	0.54488	54.397	53.998	54.543	0.58474					16	12	2	0	0	0	0.20789	1	5434	5434		31.53	5.9558	1	167560			44507	8367	29792	29805	50386	50386					-0.04591405961377859
QDHLGKRPYR	10	Unmodified	_QDHLGKRPYR_					0	0	0		nc|ENSG00000164011|Q5VV52-3|ZNF691;ENSG00000164011|ENST00000651192|ZNF691	nc|ENSG00000164011|Q5VV52-3|ZNF691	nc|ENSG00000164011|Q5VV52-3|ZNF691	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.8982849121094	3	423.898544	1268.6738	0.84719	0.00035912	-0.75853	-0.00032154	0.088656	3.7581E-05	423.8981341340152	28.976	0.82732	28.803	28.365	29.192	-0.17336					38	19	3	0	0	0	0.86776	1	1799	1799		26.75	1.6237	1	270240			44508	5900	29793	29806	50387	50387					0.050212311260111164
QDHLVPDPG	9	Unmodified	_QDHLVPDPG_					0	0	0		ENST00000446607.1_1_1:236274160-236274493:+|nuORF	ENST00000446607.1_1_1:236274160-236274493:+|nuORF	ENST00000446607.1_1_1:236274160-236274493:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.2364807128906	2	489.237981	976.461409	-0.084851	-4.1512E-05	-2.5411	-0.0012432	-2.626	-0.0012847	489.23659515743003	63.847	1.1575	63.846	63.508	64.665	-0.00078583					92	41	3	0	0	0	0.77244	1	5969	5969		32.812	0.85756	1	760060			44509	11836	29794	29807	50388	50388					-0.027762800046275515
QDIGRVLP	8	Unmodified	_QDIGRVLP_					0	0	0		ENST00000224862.7_1_10:104182019-104182794:+|nuORF	ENST00000224862.7_1_10:104182019-104182794:+|nuORF	ENST00000224862.7_1_10:104182019-104182794:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2586669921875	2	449.261259	896.507966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.086	1	73.217	72.717	73.717	0.13064								0	0	0	0.29264	1	6731	6731		29.15	0	1				44510	9184	29795	29808	50389	50389					0.055572046173210765
QDIGSDVILL	10	Unmodified	_QDIGSDVILL_					0	0	0		ENST00000459718.1_1_3:118644864-118649075:-|nuORF;nc|ENSG00000144847|Q5DX21-3|IGSF11;nc|ENSG00000144847|Q5DX21-2|IGSF11;ENSG00000144847|ENST00000393775|IGSF11	ENST00000459718.1_1_3:118644864-118649075:-|nuORF	ENST00000459718.1_1_3:118644864-118649075:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.3031005859375	2	536.797872	1071.58119	0.13037	6.9984E-05	2.3704	0.0012724	2.5007	0.0013424	536.7974000429033	56.942	0.95939	57.497	57.006	57.965	0.55513					55	22	4	0	0	0	0.47091	1	5912	5912		58.23	8.2054	1	1016200			44511	4738	29796	29809	50390	50390					0.04826288549293167
QDIKTKKR	8	Unmodified	_QDIKTKKR_					0	0	0		ENSG00000107968|ENST00000263056|MAP3K8;nc|ENSG00000107968|P41279-2|MAP3K8;ENST00000430603.1_1_10:30728116-30739489:+|nuORF	ENSG00000107968|ENST00000263056|MAP3K8	ENSG00000107968|ENST00000263056|MAP3K8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.81146240234375	2	508.81419	1015.61383	-0.63775	-0.0003245	1.2358	0.0006288	0.59806	0.0003043	508.81487501461754	43.667	3.2315	44.117	43.686	46.917	0.45025					183	79	5	0	0	0	0.36381	2	4009	4009;4047		82.305	2.5924	1	105110000			44512	2385	29797	29810	50391;50392	50391					0.10664540462801142
QDIKTKKR	8	Unmodified	_QDIKTKKR_					0	0	0		ENSG00000107968|ENST00000263056|MAP3K8;nc|ENSG00000107968|P41279-2|MAP3K8;ENST00000430603.1_1_10:30728116-30739489:+|nuORF	ENSG00000107968|ENST00000263056|MAP3K8	ENSG00000107968|ENST00000263056|MAP3K8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8096008300781	2	508.81419	1015.61383	-0.9437	-0.00048017	1.3512	0.00068751	0.4075	0.00020734	508.814896871399	43.452	2.9729	44.226	43.866	46.839	0.77379					192	73	5	0	0	0	0.38235	2	3937	3937;3961		94.006	6.31	1	100420000			44513	2385	29797	29810	50393;50394	50393					0.10664540462801142
QDILIGLL	8	Unmodified	_QDILIGLL_					0	0	0		nc|ENSG00000134014|Q9H9T3-4|ELP3;nc|ENSG00000134014|Q9H9T3-5|ELP3;nc|ENSG00000134014|Q9H9T3-2|ELP3;ENSG00000134014|ENST00000256398|ELP3	nc|ENSG00000134014|Q9H9T3-4|ELP3	nc|ENSG00000134014|Q9H9T3-4|ELP3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7878723144531	2	442.776211	883.537869	-1.3542	-0.00059962	-1.5405	-0.00068208	-2.8947	-0.0012817	442.7777156400066	40.03	0.17189	39.987	39.879	40.051	-0.043694					5	3	2	0	0	0	0.4196	1	2924	2924		12.959	0	1	20407			44514	3905	29798	29811	50395	50395					0.09144143562662066
QDISRNQY	8	Unmodified	_QDISRNQY_					0	0	0			REV__L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|52|1|sense	REV__L1PA6_dup3347|chr9:41258115-41264136:-|1.0210981755671302|0.2942167730389589|1.8|63.0|52|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2479248046875	2	512.246338	1022.47812	0.20116	0.00010304	3.3795	0.0017311	3.5806	0.0018342	512.2478040699564	46.693	0.51127	46.679	46.438	46.949	-0.013821					26	13	3	0	0	0	0.90837	1	3772	3772		56.721	0	1	161080	+		44515	29577	29799	29812	50396	50396					-0.03221779118678114
QDISWHIK	8	Unmodified	_QDISWHIK_					0	0	0		ENST00000358015.7_1_9:110093006-110093297:+|nuORF	ENST00000358015.7_1_9:110093006-110093297:+|nuORF	ENST00000358015.7_1_9:110093006-110093297:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7706909179688	2	513.771991	1025.52943	0.25741	0.00013225	-1.4176	-0.00072831	-1.1602	-0.00059606	513.7715293722142	51.58	0.67187	52.015	51.7	52.372	0.43505					39	15	3	0	0	0	0.37624	1	5138	5138		96.19	5.8206	1	933180			44516	10400	29800	29813	50397	50397					0.01768589646030705
QDKDENKV	8	Unmodified	_QDKDENKV_					0	0	0			REV__nc|ENSG00000060339|Q8IX12-2|CCAR1	REV__nc|ENSG00000060339|Q8IX12-2|CCAR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.2962951660156	2	488.240721	974.466889	0.81215	0.00039652	-3.0503	-0.0014893	-2.2382	-0.0010928	488.23916408276705	32.925	1.055	33.137	32.723	33.778	0.21168					40	24	2	0	0	0	0.4196	1	2351	2351		44.377	7.2181	1	103150	+		44517	16448	29801	29814	50398	50398					-0.021366012128055445
QDKDSEELL	9	Unmodified	_QDKDSEELL_					0	0	0		ENSG00000165730|ENST00000298596|STOX1	ENSG00000165730|ENST00000298596|STOX1	ENSG00000165730|ENST00000298596|STOX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.7587280273438	2	538.758943	1075.50333	-1.5271	-0.00082276	0.63544	0.00034235	-0.8917	-0.00048041	538.7591647336409	42.961	0.81913	43.394	43.088	43.907	0.4334					44	19	4	0	0	0	0.049188	1	3849	3849		108.09	6.8349	1	1763800			44518	6118	29802	29815	50399	50399					-0.03139769106746826
QDKLNPYRAK	10	Unmodified	_QDKLNPYRAK_					0	0	0		ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.5643615722656	3	411.56305	1231.66732	0.12386	5.0976E-05	3.4261	0.0014101	3.5499	0.001461	411.56447022986043	18.92	0.55983	18.29	18.06	18.62	-0.62961					32	12	4	0	0	0	0.57305	1	460	460		51.528	1.4942	1	348630			44519	2641	29803	29816	50400	50400					0.06075293174649232
QDKPESLQPR	10	Unmodified	_QDKPESLQPR_					0	0	0		nc|ENSG00000204084|P32019-4|INPP5B;ENSG00000204084|ENST00000373024|INPP5B;nc|ENSG00000204084|P32019|INPP5B;nc|ENSG00000204084|P32019-3|INPP5B	nc|ENSG00000204084|P32019-4|INPP5B	nc|ENSG00000204084|P32019-4|INPP5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	599.3115234375	2	599.314751	1196.61495	-1.8597	-0.0011146	-3.935	-0.0023583	-5.7947	-0.0034728	599.3121904542354	41.828	0.5064	42.462	42.28	42.786	0.6339					30	12	3	0	0	0	0.44803	1	3701	3701		60.118	7.1816	1	1243400			44520	8410	29804	29817	50401	50401					0.02450710041034654
QDKRRRKKH	9	Unmodified	_QDKRRRKKH_					0	0	0		chr6:8425200-8427937|18|22.5|0.55|5.35|-|1|None,SLC35B3|1	chr6:8425200-8427937|18|22.5|0.55|5.35|-|1|None,SLC35B3|1	chr6:8425200-8427937|18|22.5|0.55|5.35|-|1|None,SLC35B3|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.2981872558594	3	417.921683	1250.74322	-0.18837	-7.8722E-05	-1.0072	-0.00042092	-1.1955	-0.00049964	417.921109696983	68.757	0.14821	68.783	68.7	68.848	0.02636					6	4	2	0	0	0	0.20789	1	6507	6507		16.717	0	1	33655			44521	486	29805	29818	50402	50402					0.1278773486544651
QDKVRLNK	8	Unmodified	_QDKVRLNK_					0	0	0			REV__ENSG00000124126|ENST00000371941|PREX1	REV__ENSG00000124126|ENST00000371941|PREX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.79840087890625	2	500.79854	999.582528	-0.15132	-7.5782E-05	0.29224	0.00014636	0.14092	7.0573E-05	500.7985981494417	25.412	0.99467	25.084	24.703	25.698	-0.32825					42	22	3	0	0	0	0.81485	1	1307	1307		62.107	0	1	528020	+		44522	18559	29806	29819	50403	50403					0.08271967428709104
QDLAAIPD	8	Unmodified	_QDLAAIPD_					0	0	0		ENSG00000164307|ENST00000443439|ERAP1;nc|ENSG00000164307|Q9NZ08-2|ERAP1	ENSG00000164307|ENST00000443439|ERAP1	ENSG00000164307|ENST00000443439|ERAP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7550964355469	2	421.71635	841.418148	1.0823	0.00045642	2.6466	0.0011161	3.7289	0.0015726	421.7172236360138	22.626	0.39567	22.208	22.016	22.412	-0.41879					13	8	2	0	0	0	0.4196	1	906	906		17.365	4.4058	1	30504			44523	5951	29807	29820	50404	50404					-0.008904697819161811
QDLALSPR	8	Unmodified	_QDLALSPR_					0	0	0		ENST00000430801.5_1_7:77290551-77325505:-|nuORF	ENST00000430801.5_1_7:77290551-77325505:-|nuORF	ENST00000430801.5_1_7:77290551-77325505:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.25042724609375	2	450.250892	898.48723	-1.4095	-0.00063463	1.7297	0.00077879	0.32018	0.00014416	450.2515003535652	31.411	1.0426	31.49	30.856	31.899	0.079836					49	23	4	0	0	0	0.42407	1	2113	2113		79.451	0	1	1166300			44524	11638	29808	29821	50405	50405					0.033926142376685675
QDLFQLHIL	9	Unmodified	_QDLFQLHIL_					0	0	0		ENSG00000134256|ENST00000682167|CD101	ENSG00000134256|ENST00000682167|CD101	ENSG00000134256|ENST00000682167|CD101	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.3187255859375	2	563.816399	1125.61824	-0.25081	-0.00014141	2.7419	0.0015459	2.491	0.0014045	563.8170061947588	55.275	1.2619	55.238	54.668	55.929	-0.036827					46	40	2	0	0	0	0.77696	1	4653	4653		31.53	0	1	166930			44525	3921	29809	29822	50406	50406					0.060460048857066795
QDLFQLHIL	9	Unmodified	_QDLFQLHIL_					0	0	0		ENSG00000134256|ENST00000682167|CD101	ENSG00000134256|ENST00000682167|CD101	ENSG00000134256|ENST00000682167|CD101	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.77783203125	2	563.816399	1125.61824	0.33127	0.00018678	-1.6654	-0.00093899	-1.3341	-0.00075221	563.8164522596521	52.858	0.8246	53.281	52.93	53.754	0.42348					38	19	3	0	0	0	0.20789	1	5322	5322		14.137	0	1	185460			44526	3921	29809	29822	50407	50407					0.060460048857066795
QDLISKSVT	9	Unmodified	_QDLISKSVT_					0	0	0			REV__ENSG00000198203|ENST00000251481|SULT1C2	REV__ENSG00000198203|ENST00000251481|SULT1C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.77227783203125	2	495.776939	989.539325	0.28176	0.00013969	-0.33512	-0.00016614	-0.053362	-2.6456E-05	495.7766176443139	21.291	0.47341	20.848	20.596	21.069	-0.44324					18	10	2	0	0	0	0.73802	1	767	767		37.812	0	1	66518	+		44527	23308	29810	29823	50408	50408					0.04413732860757591
QDLITPLLL	9	Unmodified	_QDLITPLLL_					0	0	0			REV__ENSG00000163507|ENST00000295746|CIP2A	REV__ENSG00000163507|ENST00000295746|CIP2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3167114257812	2	513.3157	1024.61685	-0.40505	-0.00020792	2.0459	0.0010502	1.6408	0.00084226	513.3166290585863	43.201	1.1169	43.206	42.933	44.05	0.0057487					65	27	3	0	0	0	0.78536	1	3004	3004		29.15	1.2673	1	350060	+		44528	20925	29811	29824	50409	50409					0.10552370796949617
QDLITPLLL	9	Unmodified	_QDLITPLLL_					0	0	0			REV__ENSG00000163507|ENST00000295746|CIP2A	REV__ENSG00000163507|ENST00000295746|CIP2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3180541992188	2	513.3157	1024.61685	-0.38757	-0.00019894	2.4414	0.0012532	2.0539	0.0010543	513.3170376628356	53.655	1.47	53.703	53.107	54.577	0.047802					76	53	2	0	0	0	0.78536	1	4404	4404		29.15	1.2673	1	209860	+		44529	20925	29811	29824	50410	50410					0.10552370796949617
QDLKTKDLIK	10	Unmodified	_QDLKTKDLIK_					0	0	0			REV__ENSG00000177453|ENST00000326035|NIM1K	REV__ENSG00000177453|ENST00000326035|NIM1K	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	601.8637084960938	2	601.36117	1200.70779	-0.091496	-5.5022E-05	4.2575	0.0025603	4.166	0.0025053	601.3635495118442	21.061	0.3777	20.432	20.208	20.586	-0.62835					17	10	2	0	0	0	0.86549	1	726	726		18.262	7.9968	1	47853	+		44530	22202	29812	29825	50411	50411					0.11546214774398322
QDLKTKDLIK	10	Unmodified	_QDLKTKDLIK_					0	0	0			REV__ENSG00000177453|ENST00000326035|NIM1K	REV__ENSG00000177453|ENST00000326035|NIM1K	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	601.36117	1200.70779	1.3296	0.00079956	2.6107	0.00157	3.9403	0.0023695	601.3628622196729	20.839	0.34861	20.38	20.192	20.54	-0.4591	-0.026269	-0.0011309	NaN	18.262	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41820	+		44531	22202	29812	29825							0.11546214774398322
QDLKTKDLIK	10	Unmodified	_QDLKTKDLIK_					0	0	0			REV__ENSG00000177453|ENST00000326035|NIM1K	REV__ENSG00000177453|ENST00000326035|NIM1K	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	601.36117	1200.70779	-0.091496	-5.5022E-05	4.2575	0.0025603	4.166	0.0025053	601.3635495118442	21.061	0.3777	20.432	20.208	20.586	-0.62835	0.026269	0.00084974	NaN	18.262	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47853	+		44532	22202	29812	29825							0.11546214774398322
QDLPDCCFWAS	11	Unmodified	_QDLPDCCFWAS_					0	0	0		ENST00000421852.5_1_3:185207567-185207957:-|nuORF	ENST00000421852.5_1_3:185207567-185207957:-|nuORF	ENST00000421852.5_1_3:185207567-185207957:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.7530517578125	2	642.754824	1283.49509	0.046508	2.9893E-05	-2.8491	-0.0018313	-2.8026	-0.0018014	642.7527988076217	52.206	0.94975	52.204	51.833	52.783	-0.0020447					58	23	4	0	0	0	0.32318	1	4503	4503		69.628	2.134	1	917140			44533	11473	29813	29826	50412	50412					-0.13531362619369247
QDLPDCCFWAS	11	Unmodified	_QDLPDCCFWAS_					0	0	0		ENST00000421852.5_1_3:185207567-185207957:-|nuORF	ENST00000421852.5_1_3:185207567-185207957:-|nuORF	ENST00000421852.5_1_3:185207567-185207957:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.753173828125	2	642.754824	1283.49509	-0.76535	-0.00049193	-2.0439	-0.0013137	-2.8092	-0.0018056	642.7533636052166	52.144	0.88099	52.12	51.821	52.702	-0.023853					49	20	3	0	0	0	0.45916	1	4632	4632		54.776	3.5836	1	1141900			44534	11473	29813	29826	50413	50413					-0.13531362619369247
QDLPDCCFWAS	11	Unmodified	_QDLPDCCFWAS_					0	0	0		ENST00000421852.5_1_3:185207567-185207957:-|nuORF	ENST00000421852.5_1_3:185207567-185207957:-|nuORF	ENST00000421852.5_1_3:185207567-185207957:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.751708984375	2	642.754824	1283.49509	0.76913	0.00049436	-4.1169	-0.0026462	-3.3478	-0.0021518	642.7521840357391	52.199	0.93826	52.211	51.851	52.789	0.01244					60	21	4	0	0	0	0.39037	1	4511	4511		60.118	1.8883	1	1121900			44535	11473	29813	29826	50414	50414					-0.13531362619369247
QDLRSHCYCC	10	Carbamidomethyl (C)	_QDLRSHCYC(Carbamidomethyl (C))C_	QDLRSHC(0.067)YC(0.727)C(0.206)		QDLRSHC(-10)YC(5.5)C(-5.5)		0	1	0		ENST00000414347.5_1_22:37771936-37814940:-|nuORF;ENST00000435824.5_1_22:37771936-37816401:-|nuORF	ENST00000414347.5_1_22:37771936-37814940:-|nuORF	ENST00000414347.5_1_22:37771936-37814940:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.7520141601562	2	642.74955	1283.48455	0.76913	0.00049436	4.0883	0.0026278	4.8575	0.0031221	642.7521840357391	52.199	0.93826	52.211	51.851	52.789	0.01244					60	21	4	0	0	0	0.21786	2	4570	4533;4570		82.241	22.122	3	1121900			44536	11366	29814	29827	50415;50416	50416	145				-0.14585668545464614
QDLYLEGF	8	Unmodified	_QDLYLEGF_					0	0	0		ENST00000483659.5_1_2:85623114-85625192:-|nuORF	ENST00000483659.5_1_2:85623114-85625192:-|nuORF	ENST00000483659.5_1_2:85623114-85625192:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.9136962890625	2	492.737283	983.460012	-1.156	-0.0005696	-2.2707	-0.0011188	-3.4266	-0.0016884	492.735599623016	24.886	0.35842	24.849	24.668	25.026	-0.037176					11	7	2	0	0	0	0.4196	1	962	962		44.531	0	1	15554			44537	12519	29815	29828	50417	50417					-0.03237914093369909
QDMPEGLLL	9	Unmodified	_QDMPEGLLL_					0	0	0		ENST00000587482.1_1_19:3649915-3700388:-|nuORF;nc|ENSG00000186111|O60331-4|PIP5K1C;ENSG00000186111|ENST00000335312|PIP5K1C;nc|ENSG00000186111|O60331-2|PIP5K1C;nc|ENSG00000186111|O60331-3|PIP5K1C	ENST00000587482.1_1_19:3649915-3700388:-|nuORF	ENST00000587482.1_1_19:3649915-3700388:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.2907409667969	2	508.260068	1014.50558	1.18	0.00059973	3.1407	0.0015963	4.3207	0.002196	508.2617212433278	29.638	0.38756	29.548	29.404	29.792	-0.089546					18	8	3	0	0	0	0.20789	1	1925	1925		21.96	4.5949	1	81670			44538	7774	29816	29829	50418	50418					-0.0010901190262302407
QDNSQKKVA	9	Unmodified	_QDNSQKKVA_					0	0	0		ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2681579589844	2	509.269813	1016.52507	0.63258	0.00032215	-0.75364	-0.00038381	-0.12106	-6.1652E-05	509.2693105940911	17.08	0.75059	16.598	16.241	16.991	-0.48256					34	16	3	0	0	0	0.38563	1	204	204		58.782	2.0609	1	540950			44539	4244	29817	29830	50419	50419					0.017470804324716482
QDPAQRDFSA	10	Unmodified	_QDPAQRDFSA_					0	0	0			REV__ENSG00000174145|ENST00000309447|NWD2	REV__ENSG00000174145|ENST00000309447|NWD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.32763671875	2	567.762352	1133.51015	4.2414	0.0024081	-4.2234	-0.0023979	0.017907	1.0167E-05	567.7598127239444	103.94	0.71139	104.2	103.89	104.6	0.26524					30	16	2	0	0	0	0.37624	1	12649	12649		16.007	5.1412	1	251920	+		44540	21975	29818	29831	50420	50420					-0.05126411435526279
QDPKLLVHL	9	Unmodified	_QDPKLLVHL_					0	0	0		ENSG00000087365|ENST00000322535|SF3B2	ENSG00000087365|ENST00000322535|SF3B2	ENSG00000087365|ENST00000322535|SF3B2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8163452148438	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.77696	1	8194	8194		31.53	1.0262	1	859730			44541	1577	29819	29832	50421	50421					0.09498308748334239
QDPLELMTK	9	Unmodified	_QDPLELMTK_					0	0	0			REV__ENSG00000116205|ENST00000234827|TCEANC2	REV__ENSG00000116205|ENST00000234827|TCEANC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	537.7764892578125	2	537.778625	1073.5427	-0.043154	-2.3207E-05	-1.6288	-0.00087595	-1.672	-0.00089916	537.7778414033497	44.053	0.8205	44.061	43.725	44.545	0.0084534					30	19	2	0	0	0	0.71772	1	3080	3080		39.253	7.723	1	141920	+		44542	18190	29820	29833	50422	50422					0.008866596431289508
QDPNRLLS	8	Unmodified	_QDPNRLLS_					0	0	0		nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;ENSG00000117600|ENST00000370185|PLPPR4;nc|ENSG00000117600|Q7Z2D5|PLPPR4;chr1:99300966-99305685|28|13.14|0.6|4.45|+|ENST00000457765|PLPPR4,PLPPR4;nc|ENSG00000117600|Q7Z2D5-3|PLPPR4	nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7543640136719	2	471.753798	941.493044	-0.09021	-4.2557E-05	0.084128	3.9688E-05	-0.006082	-2.8692E-06	471.75366761190736	32.111	0.60071	32.218	31.888	32.488	0.10707					29	13	3	0	0	0	0.79403	1	2227	2227		63.306	11.971	1	562510			44543	2989	29821	29834	50423	50423					0.019957127493285043
QDPPVGGLYY	10	Unmodified	_QDPPVGGLYY_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.7661743164062	2	554.769114	1107.52368	-0.77518	-0.00043005	-1.2395	-0.00068762	-2.0146	-0.0011177	554.7674856598604	34.629	0.76677	34.624	34.217	34.983	-0.0047417					36	19	3	0	0	0	0.74274	1	2098	2098		42.396	3.1433	1	107300	+		44544	18894	29822	29835	50424	50424					-0.025785536562807465
QDPSLSLHLV	10	Unmodified	_QDPSLSLHLV_					0	0	0			REV__nc|ENSG00000164287|Q86Y33-3|CDC20B	REV__nc|ENSG00000164287|Q86Y33-3|CDC20B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.748046875	2	554.803488	1107.59242	0.65961	0.00036595	4.4109	0.0024472	5.0705	0.0028131	554.8069146066666	49.958	0.21035	50.803	50.683	50.893	0.84501					6	4	2	0	0	0	0.37624	1	4897	4897		49.442	5.3247	1	118110	+		44545	21058	29823	29836	50425	50425					0.0429311064342528
QDQGKFIS	8	Unmodified	_QDQGKFIS_					0	0	0		ENSG00000168158|ENST00000304936|OR2C1;ENSG00000177476|ENST00000320002|OR2G3;nc|ENSG00000182477|P59922|OR2B8P	ENSG00000168158|ENST00000304936|OR2C1	ENSG00000168158|ENST00000304936|OR2C1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.7346496582031	2	461.735074	921.455596	0.66231	0.00030581	-0.53789	-0.00024836	0.12442	5.7447E-05	461.73461810636286	32.744	0.63437	32.956	32.636	33.271	0.21168					33	14	3	0	0	0	0.90523	1	2321	2321		40.778	0	1	643540			44546	6379	29824	29837	50426	50426					-0.00827378516294175
QDQHEVGTVLP	11	Unmodified	_QDQHEVGTVLP_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.5663146972656	3	408.206932	1221.59897	0.04378	1.7871E-05	3.7796	0.0015429	3.8234	0.0015607	408.54270634174566	59.186	0.2513	59.578	59.401	59.652	0.39209					7	5	2	0	0	0	0.17272	1	6218	6218		20.315	2.847	1	124320	+		44547	20661	29825	29838	50427	50427					-0.002969961958569911
QDRDYTRFQEQ	11	Unmodified	_QDRDYTRFQEQ_					0	0	0		ENST00000522879.1_1_5:171491486-171509389:-|nuORF;ENSG00000072786|ENST00000176763|STK10	ENST00000522879.1_1_5:171491486-171509389:-|nuORF	ENST00000522879.1_1_5:171491486-171509389:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	496.2367858886719	3	495.895416	1484.66442	-1.0025	-0.00049712	0.48321	0.00023962	-0.51925	-0.00025749	495.89558476172044	29.049	0.45512	29.03	28.89	29.346	-0.019407					26	17	2	0	0	0	0.77511	1	1455	1455		16.53	2.4438	1	23566			44548	1281	29826	29839	50428	50428					-0.05852626740784217
QDREGSYHEVT	11	Unmodified	_QDREGSYHEVT_					0	0	0		ENSG00000163092|ENST00000409195|XIRP2;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	ENSG00000163092|ENST00000409195|XIRP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2926330566406	3	440.865346	1319.57421	0.099244	4.3753E-05	-2.9649	-0.0013071	-2.8656	-0.0012634	440.8628470728039	59.775	0.2327	59.743	59.612	59.844	-0.031727					8	5	2	0	0	0	0.1746	1	5614	5614		24.276	6.4428	1	27104			44549	5765	29827	29840	50429	50429					-0.07279676069242669
QDRFKAQI	8	Unmodified	_QDRFKAQI_					0	0	0		nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;ENSG00000074054|ENST00000696935|CLASP1	nc|ENSG00000074054|Q7Z460-2|CLASP1	nc|ENSG00000074054|Q7Z460-2|CLASP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.2612609863281	2	503.277441	1004.54033	-0.40686	-0.00020476	-0.73266	-0.00036873	-1.1395	-0.00057349	503.2771723674231	49.639	0.5306	50.099	49.707	50.237	0.45983					16	12	2	0	0	0	0.4196	1	4800	4800		37.159	6.6555	1	249980			44550	1304	29828	29841	50430	50430					0.03823992020318201
QDRFKAQI	8	Unmodified	_QDRFKAQI_					0	0	0		nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;ENSG00000074054|ENST00000696935|CLASP1	nc|ENSG00000074054|Q7Z460-2|CLASP1	nc|ENSG00000074054|Q7Z460-2|CLASP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	503.277441	1004.54033	1.0251	0.00051592	-3.1928	-0.0016069	-2.1677	-0.001091	503.27582973217767	49.395	0.40304	50.24	50.074	50.477	0.84501	0.070751	-0.0013797	NaN	29.15	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165950			44551	1304	29828	29841							0.03823992020318201
QDRIEKITP	9	Unmodified	_QDRIEKITP_					0	0	0			REV__ENST00000525315.5_1_8:11708209-11710963:-|nuORF	REV__ENST00000525315.5_1_8:11708209-11710963:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3085327148438	2	550.308938	1098.60332	0.22784	0.00012538	-0.30799	-0.00016949	-0.080147	-4.4105E-05	550.3087229601335	31.292	1.3765	31.296	30.71	32.086	0.0037193					63	31	4	0	0	0	0.75725	1	2152	2152		36.447	1.2947	1	1781500	+		44552	21109	29829	29842	50431	50431					0.05796513017708094
QDRIPVLQKVK	11	Unmodified	_QDRIPVLQKVK_					0	0	0			REV__nc|ENSG00000077522|P35609-2|ACTN2	REV__nc|ENSG00000077522|P35609-2|ACTN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9401550292969	3	441.94175	1322.80342	-1.4755	-0.00065207	-2.8855	-0.0012752	-4.3609	-0.0019273	441.9403125343586	55.224	1.199	55.287	54.704	55.903	0.063725					106	39	3	0	0	0	0.74002	1	4568	4568		24.276	0.75323	1	485540	+		44553	16750	29830	29843	50432	50432					0.1549298768529752
QDRIPVLQKVK	11	Unmodified	_QDRIPVLQKVK_					0	0	0			REV__nc|ENSG00000077522|P35609-2|ACTN2	REV__nc|ENSG00000077522|P35609-2|ACTN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2749328613281	3	441.94175	1322.80342	-1.4738	-0.00065135	-3.037	-0.0013422	-4.5109	-0.0019936	441.94028424164003	56.309	0.61998	56.381	55.844	56.464	0.071835					69	31	3	0	0	0	0.70278	1	4726	4726		31.068	7.6902	1	795270	+		44554	16750	29830	29843	50433	50433					0.1549298768529752
QDRPFFLPLD	10	Unmodified	_QDRPFFLPLD_					0	0	0			REV__nc|ENSG00000158019|Q9NXR7-4|BABAM2	REV__nc|ENSG00000158019|Q9NXR7-4|BABAM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	624.3287963867188	2	624.324588	1246.63462	0.93813	0.0005857	0.88393	0.00055186	1.8221	0.0011376	624.3244602756348	63.863	0.72694	64.418	64.046	64.773	0.5545					32	16	3	0	0	0	0.73395	1	6917	6917		42.864	1.4377	1	596860	+		44555	20580	29831	29844	50434	50434					0.02117086051816841
QDRPKVVF	8	Unmodified	_QDRPKVVF_					0	0	0			REV__nc|ENSG00000169855|Q9Y6N7-6|ROBO1	REV__nc|ENSG00000169855|Q9Y6N7-6|ROBO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7823181152344	2	494.782359	987.550165	2.0595	0.001019	-2.4388	-0.0012067	-0.37935	-0.0001877	494.78110332701044	25.036	1.6025	24.524	24.013	25.616	-0.5123					97	36	6	0	0	0	0.47906	1	1311	1311		76.847	15.875	1	3117700	+		44556	21606	29832	29845	50435	50435					0.05589180025708629
QDRPSPTTAP	10	Unmodified	_QDRPSPTTAP_					0	0	0		ENST00000472564.1_1_13:113960786-113974926:+|nuORF;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	ENST00000472564.1_1_13:113960786-113974926:+|nuORF	ENST00000472564.1_1_13:113960786-113974926:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.27001953125	2	535.26727	1068.51999	0.30503	0.00016327	1.2618	0.00067539	1.5668	0.00083867	535.2678902855296	25.638	0.63939	25.381	25.043	25.682	-0.2572					35	14	3	0	0	0	0.28217	1	1328	1328		74.255	6.7614	1	367200			44557	7752	29833	29846	50436	50436					-0.01153223430151229
QDRPSPTTAP	10	Unmodified	_QDRPSPTTAP_					0	0	0		ENST00000472564.1_1_13:113960786-113974926:+|nuORF;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	ENST00000472564.1_1_13:113960786-113974926:+|nuORF	ENST00000472564.1_1_13:113960786-113974926:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.267578125	2	535.26727	1068.51999	2.3766	0.0012721	-0.85361	-0.00045691	1.523	0.00081521	535.2667942353804	25.666	0.80199	25.235	24.895	25.697	-0.4311					44	18	4	0	0	0	0.67571	1	1377	1377		45.972	3.108	1	495420			44558	7752	29833	29846	50437	50437					-0.01153223430151229
QDSADKVDPR	10	Unmodified	_QDSADKVDPR_					0	0	0			REV__nc|ENSG00000241697|Q8IYR6-2|TMEFF1	REV__nc|ENSG00000241697|Q8IYR6-2|TMEFF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	566.6986083984375	2	565.775459	1129.53637	0.64276	0.00036366	0.3028	0.00017131	0.94556	0.00053497	566.2752457230691	30.588	0.099342	30.586	30.507	30.606	-0.0022545					7	4	2	0	0	0	0.37624	1	1352	1352		7.8045	3.4657	1	37153	+		44559	23823	29834	29847	50438	50438					-0.02322142264051763
QDSADKVDPR	10	Unmodified	_QDSADKVDPR_					0	0	0			REV__nc|ENSG00000241697|Q8IYR6-2|TMEFF1	REV__nc|ENSG00000241697|Q8IYR6-2|TMEFF1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	565.775459	1129.53637	0.23243	0.0001315	7.4358	0.004207	7.6682	0.0043385	565.7805034522928	30.423	0.1208	30.535	30.443	30.564	0.11225	-0.025364	0.0079064	NaN	7.8045	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47967	+		44560	23823	29834	29847							-0.02322142264051763
QDSEQPEESP	10	Unmodified	_QDSEQPEESP_					0	0	0			REV__ENST00000483567.1_1_7:123143235-123152394:-|nuORF	REV__ENST00000483567.1_1_7:123143235-123152394:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.233642578125	2	573.23329	1144.45203	0.69324	0.00039739	0.080905	4.6378E-05	0.77415	0.00044377	573.2331643277087	29.173	1.2859	28.999	28.547	29.833	-0.17336					67	29	3	0	0	0	0.82886	1	1804	1804		37.812	2.6595	1	1232400	+		44561	21103	29835	29848	50439	50439					-0.11442137871449631
QDSEVQALAC	10	Unmodified	_QDSEVQALAC_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.2374267578125	2	532.239864	1062.46517	-0.9634	-0.00051276	-2.5507	-0.0013576	-3.5141	-0.0018704	532.2382568703794	39.812	0.68723	39.821	39.47	40.158	0.0092812					41	15	4	0	0	0	0.70553	1	2804	2804		44.377	8.0595	1	274680			44562	14896	29836	29849	50440	50440					-0.0635597829307244
QDSIQWVR	8	Unmodified	_QDSIQWVR_					0	0	0			REV__nc|ENSG00000198554|O75717-2|WDHD1	REV__nc|ENSG00000198554|O75717-2|WDHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3136596679688	2	516.267073	1030.51959	0.38227	0.00019735	-3.7005	-0.0019104	-3.3182	-0.0017131	516.2648235445441	29.919	0.42907	29.83	29.706	30.135	-0.089546					12	9	2	0	0	0	0.4196	1	1966	1966		27.882	0	1	62325	+		44563	23338	29837	29850	50441	50441					0.005554016406676965
QDSKVLPR	8	Unmodified	_QDSKVLPR_					0	0	0		ENST00000409556.5_1_2:86684189-86693535:+|nuORF;ENST00000488971.1_1_2:86683605-86693535:+|nuORF	ENST00000409556.5_1_2:86684189-86693535:+|nuORF	ENST00000409556.5_1_2:86684189-86693535:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.77081298828125	2	471.771991	941.529429	-0.083673	-3.9475E-05	-0.21942	-0.00010352	-0.30309	-0.00014299	471.771717611514	32.104	0.60151	32.211	31.93	32.532	0.10707					25	13	2	0	0	0	0.37302	1	2239	2239		87.754	2.8388	1	710380			44564	11311	29838	29851	50442	50442					0.05632589646040742
QDSNLSLTVP	10	Unmodified	_QDSNLSLTVP_					0	0	0		nc|ENSG00000172943|Q9UPP1-3|PHF8;nc|ENSG00000172943|Q9UPP1|PHF8;nc|ENSG00000172943|Q9UPP1-4|PHF8;ENSG00000172943|ENST00000338154|PHF8	nc|ENSG00000172943|Q9UPP1-3|PHF8	nc|ENSG00000172943|Q9UPP1-3|PHF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.276611328125	2	537.277303	1072.54005	1.2388	0.00066558	0.7175	0.0003855	1.9563	0.0010511	537.2771822937506	24.304	0.91818	23.79	23.408	24.326	-0.51365					46	20	4	0	0	0	0.86106	1	1186	1186		33.922	1.1092	1	351380			44565	15099	29839	29852	50443	50443					0.006685275098107013
QDSRVAFS	8	Unmodified	_QDSRVAFS_					0	0	0		ENST00000359866.8_1_19:17430707-17431082:+|nuORF	ENST00000359866.8_1_19:17430707-17431082:+|nuORF	ENST00000359866.8_1_19:17430707-17431082:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.9398498535156	2	455.224874	908.435195	0.02233	1.0165E-05	0.32042	0.00014586	0.34275	0.00015603	455.22474580251486	20.164	0.59767	19.704	19.501	20.099	-0.46006					26	12	3	0	0	0	0.4196	1	651	651		30.504	0	1	112270			44566	10438	29840	29853	50444	50444					-0.022685491760853438
QDSTTTRQ	8	Unmodified	_QDSTTTRQ_					0	0	0		ENST00000477561.5_1_X:48660534-48661332:+|nuORF;ENST00000481929.5_1_X:48660630-48664079:+|nuORF;ENST00000477528.5_1_X:48660534-48664079:+|nuORF;ENST00000465269.5_1_X:48660931-48664079:+|nuORF;ENST00000462730.5_1_X:48660634-48664079:+|nuORF;ENSG00000094631|ENST00000334136|HDAC6	ENST00000477561.5_1_X:48660534-48661332:+|nuORF	ENST00000477561.5_1_X:48660534-48661332:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7231750488281	2	468.722695	935.430838	2.8837	0.0013516	-1.6552	-0.00077582	1.2285	0.00057583	468.7218949032731	103.72	1.0883	103.99	103.67	104.76	0.26524					69	25	4	0	0	0	0.87792	1	12663	12663		31.53	6.0796	1	2233300			44567	1712	29841	29854	50445	50445					-0.039460583896698154
QDSTTTRQ	8	Unmodified	_QDSTTTRQ_					0	0	0		ENST00000477561.5_1_X:48660534-48661332:+|nuORF;ENST00000481929.5_1_X:48660630-48664079:+|nuORF;ENST00000477528.5_1_X:48660534-48664079:+|nuORF;ENST00000465269.5_1_X:48660931-48664079:+|nuORF;ENST00000462730.5_1_X:48660634-48664079:+|nuORF;ENSG00000094631|ENST00000334136|HDAC6	ENST00000477561.5_1_X:48660534-48661332:+|nuORF	ENST00000477561.5_1_X:48660534-48661332:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	468.722695	935.430838	-0.96109	-0.00045049	2.3403	0.001097	1.3792	0.00064647	468.7237114109983	103.63	0.48314	103.81	103.58	104.07	0.18298	-0.084413	0.0023285	NaN	31.53	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137420			44568	1712	29841	29854							-0.039460583896698154
QDSTTTRQ	8	Unmodified	_QDSTTTRQ_					0	0	0		ENST00000477561.5_1_X:48660534-48661332:+|nuORF;ENST00000481929.5_1_X:48660630-48664079:+|nuORF;ENST00000477528.5_1_X:48660534-48664079:+|nuORF;ENST00000465269.5_1_X:48660931-48664079:+|nuORF;ENST00000462730.5_1_X:48660634-48664079:+|nuORF;ENSG00000094631|ENST00000334136|HDAC6	ENST00000477561.5_1_X:48660534-48661332:+|nuORF	ENST00000477561.5_1_X:48660534-48661332:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	468.722695	935.430838	0.7721	0.0003619	1.0309	0.0004832	1.803	0.0008451	468.72293686023477	103.66	0.48438	103.78	103.59	104.07	0.12275	-0.1161	0.001101	NaN	31.53	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144100			44569	1712	29841	29854							-0.039460583896698154
QDSTTTRQ	8	Unmodified	_QDSTTTRQ_					0	0	0		ENST00000477561.5_1_X:48660534-48661332:+|nuORF;ENST00000481929.5_1_X:48660630-48664079:+|nuORF;ENST00000477528.5_1_X:48660534-48664079:+|nuORF;ENST00000465269.5_1_X:48660931-48664079:+|nuORF;ENST00000462730.5_1_X:48660634-48664079:+|nuORF;ENSG00000094631|ENST00000334136|HDAC6	ENST00000477561.5_1_X:48660534-48661332:+|nuORF	ENST00000477561.5_1_X:48660534-48661332:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	468.722695	935.430838	-1.7168	-0.00080471	3.2426	0.0015199	1.5258	0.00071519	468.7241124868872	103.73	0.43169	103.84	103.65	104.08	0.11494	-0.053739	0.0031744	NaN	31.53	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95417			44570	1712	29841	29854							-0.039460583896698154
QDTEENILL	9	Unmodified	_QDTEENILL_					0	0	0		nc|ENSG00000084112|Q8WYL5-2|SSH1;nc|ENSG00000084112|Q8WYL5-5|SSH1;ENSG00000084112|ENST00000326495|SSH1;nc|ENSG00000084112|Q8WYL5-3|SSH1;ENST00000547862.6_1_12:109201407-109211001:-|nuORF	nc|ENSG00000084112|Q8WYL5-2|SSH1	nc|ENSG00000084112|Q8WYL5-2|SSH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.7695922851562	2	537.769311	1073.52407	0.2234	0.00012014	0.26948	0.00014492	0.49287	0.00026505	537.7692334658091	24.754	0.76684	24.426	24.116	24.883	-0.32825					45	16	4	0	0	0	0.36616	1	1230	1230		60.118	3.6845	1	482240			44571	1514	29842	29855	50446	50446					-0.009751787270943169
QDTFPEET	8	Unmodified	_QDTFPEET_					0	0	0		nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.64581298828125	2	483.70618	965.397806	-1.2817	-0.00061996	0.66934	0.00032376	-0.61235	-0.0002962	483.7064869285205	44.776	0.5348	45.62	45.461	45.995	0.84437					22	12	2	0	0	0	0.4196	1	4129	4129		11.511	0	1	193130			44572	14953	29843	29856	50447	50447					-0.08627685232386284
QDTFRWYG	8	Unmodified	_QDTFRWYG_					0	0	0		ENST00000373279.5_1_10:71392915-71393320:+|nuORF	ENST00000373279.5_1_10:71392915-71393320:+|nuORF	ENST00000373279.5_1_10:71392915-71393320:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.6273803710938	2	536.745973	1071.47739	-0.80843	-0.00043392	-3.104	-0.0016661	-3.9125	-0.0021	536.7434946160575	54.325	0.41794	54.91	54.667	55.085	0.58474					13	9	2	0	0	0	0.4196	1	5565	5565		40.778	11.629	1	62473			44573	10738	29844	29857	50448	50448					-0.055485737677372526
QDTLPTLIKLP	11	Unmodified	_QDTLPTLIKLP_					0	0	0			REV__nc|ENSG00000196091|Q00872-5|MYBPC1	REV__nc|ENSG00000196091|Q00872-5|MYBPC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8699340820312	2	619.871371	1237.72819	1.2588	0.00078029	-4.0214	-0.0024927	-2.7626	-0.0017124	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.7434	1	11673	11673		23.523	1.5628	1	4742500	+		44574	23088	29845	29858	50449	50449					0.11883385434225602
QDTQVGLL	8	Unmodified	_QDTQVGLL_					0	0	0			REV__ENST00000478085.5_1_22:40800171-40802852:+|nuORF	REV__ENST00000478085.5_1_22:40800171-40802852:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7631530761719	2	437.23745	872.460347	-0.35601	-0.00015566	-0.51344	-0.00022449	-0.86945	-0.00038015	437.2371293542525	26.246	0.85015	26.208	25.729	26.58	-0.038525					22	18	2	0	0	0	0.4196	1	1198	1198		63.306	0	1	48277	+		44575	17180	29846	29859	50450	50450					0.019015056264720442
QDTYQIMK	8	Unmodified	_QDTYQIMK_					0	0	0		ENST00000576393.5_1_17:79651084-79657315:+|nuORF;ENST00000576498.5_1_17:79651084-79658602:+|nuORF;nc|ENSG00000185359|O14964-2|HGS;ENSG00000185359|ENST00000329138|HGS	ENST00000576393.5_1_17:79651084-79657315:+|nuORF	ENST00000576393.5_1_17:79651084-79657315:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.2201538085938	2	513.749867	1025.48518	0.0048605	2.4971E-06	-3.6015	-0.0018503	-3.5966	-0.0018478	514.2495281093488	29.913	0.42799	29.87	29.634	30.062	-0.043093					11	8	2	0	0	0	0.4196	1	1581	1581		45.952	11.779	1	36085			44576	7706	29847	29860	50451	50451					-0.026541825624462945
QDVEVHLEDQ	10	Unmodified	_QDVEVHLEDQ_					0	0	0		ENST00000526058.1_1_11:66360677-66366729:+|nuORF;ENST00000530384.5_1_11:66360639-66366729:+|nuORF;ENSG00000173992|ENST00000533244|CCS	ENST00000526058.1_1_11:66360677-66366729:+|nuORF	ENST00000526058.1_1_11:66360677-66366729:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.2828369140625	2	606.280574	1210.5466	-0.70845	-0.00042952	0.73363	0.00044479	0.025179	1.5265E-05	606.2810253358075	42.839	0.46296	42.803	42.595	43.058	-0.035816					16	10	2	0	0	0	0.86106	1	3313	3313		33.922	3.418	1	104910			44577	6903	29848	29861	50452	50452					-0.05025579329458196
QDVSIKIK	8	Unmodified	_QDVSIKIK_					0	0	0			REV__nc|ENSG00000120500|P36575-2|ARR3	REV__nc|ENSG00000120500|P36575-2|ARR3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7716979980469	2	465.784567	929.554582	0.14634	6.8163E-05	-0.79179	-0.00036881	-0.64545	-0.00030064	465.7844202474872	22.719	0.1741	22.108	21.99	22.164	-0.6107					5	3	2	0	0	0	0.4196	1	938	938		98.629	26.752	1	24634	+		44578	18415	29849	29862	50453	50453					0.08698644448611503
QDYIWHCI	8	Unmodified	_QDYIWHCI_					0	0	0		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6;ENST00000550040.1_1_12:50153009-50155568:+|nuORF	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	539.2415771484375	2	539.244752	1076.47495	-0.56157	-0.00030282	-3.8324	-0.0020666	-4.394	-0.0023694	539.2426054566623	61.977	0.63985	61.993	61.594	62.234	0.015724					36	24	2	0	0	0	0.89457	1	5412	5412		37.028	1.8278	1	430660			44579	4387	29850	29863	50454	50454					-0.06022745497034521
QDYKKQKQEEF	11	Unmodified	_QDYKKQKQEEF_					0	0	0		ENSG00000158417|ENST00000289371|EIF5B	ENSG00000158417|ENST00000289371|EIF5B	ENSG00000158417|ENST00000289371|EIF5B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7959899902344	3	490.912296	1469.71506	-1.0563	-0.00051853	-0.084625	-4.1543E-05	-1.1409	-0.00056007	490.91244235056485	45.589	0.40669	46.06	45.807	46.214	0.47139					20	9	3	0	0	0	0.17835	1	4219	4219		11.932	1.3456	1	277390			44580	5475	29851	29864	50455	50455					-0.0010109741581345588
QEAAEETNLAQ	11	Unmodified	_QEAAEETNLAQ_					0	0	0			REV__nc|ENSG00000275410|P35680-3|HNF1B	REV__nc|ENSG00000275410|P35680-3|HNF1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.2796630859375	2	602.278032	1202.54151	-0.83376	-0.00050216	1.9802	0.0011926	1.1465	0.00069049	602.2791335320527	40.386	0.68192	40.343	40.008	40.69	-0.043694					43	16	4	0	0	0	0.3308	1	2945	2945		66.962	0.53265	1	723560	+		44581	30266	29852	29865	50456	50456					-0.05165883192103138
QEAAKNKK	8	Unmodified	_QEAAKNKK_					0	0	0		ENSG00000054118|ENST00000354618|THRAP3;ENST00000466743.1_1_1:36755336-36759695:+|nuORF	ENSG00000054118|ENST00000354618|THRAP3	ENSG00000054118|ENST00000354618|THRAP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.78216552734375	2	458.764166	915.513779	0.63516	0.00029139	-3.5801	-0.0016424	-2.9449	-0.001351	458.7626239641195	21.033	0.25534	21.017	20.808	21.064	-0.016428					15	10	2	0	0	0	0.36484	1	548	548		102.77	6.5829	1	33416			44582	1015	29853	29866	50457	50457					0.052643031289903774
QEAEEAKEALL	11	Unmodified	_QEAEEAKEALL_					0	0	0		ENSG00000147065|ENST00000360270|MSN	ENSG00000147065|ENST00000360270|MSN	ENSG00000147065|ENST00000360270|MSN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	615.8136596679688	2	615.81425	1229.61395	-0.15038	-9.2604E-05	1.118	0.00068846	0.96758	0.00059585	615.8141634997523	45.624	0.55784	46.519	46.247	46.805	0.89542					48	13	5	0	0	0	0.00084953	1	4265	4265		120.31	35.145	1	1485400			44583	4878	29854	29867	50458	50458					0.008324508814666842
QEAEEAKEALL	11	Unmodified	_QEAEEAKEALL_					0	0	0		ENSG00000147065|ENST00000360270|MSN	ENSG00000147065|ENST00000360270|MSN	ENSG00000147065|ENST00000360270|MSN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	615.81425	1229.61395	-0.32103	-0.00019769	1.5488	0.00095375	1.2277	0.00075605	615.8141957753895	45.826	0.6053	46.297	46.009	46.614	0.4714	-0.11098	0.00027209	NaN	120.31	52	14	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1255700			44584	4878	29854	29867							0.008324508814666842
QEAIEELLN	9	Unmodified	_QEAIEELLN_					0	0	0			REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.7708740234375	2	529.771854	1057.52915	0.52899	0.00028025	-2.6127	-0.0013841	-2.0837	-0.0011039	529.7701667802362	67.166	0.82552	67.293	67.003	67.829	0.12748					76	32	3	0	0	0	0.6204	1	6032	6032		45.972	0	1	704470	+		44585	18928	29855	29868	50459	50459					0.002691251355372515
QEANNPRKLQ	10	Unmodified	_QEANNPRKLQ_					0	0	0		ENST00000550317.1_1_12:111284592-111319020:+|nuORF;nc|ENSG00000173093|Q8NA47-2|CCDC63;ENSG00000173093|ENST00000308208|CCDC63	ENST00000550317.1_1_12:111284592-111319020:+|nuORF	ENST00000550317.1_1_12:111284592-111319020:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3244018554688	2	599.320368	1196.62618	0.5273	0.00031602	2.9677	0.0017786	3.495	0.0020946	599.3217465646096	59.463	0.68615	59.577	59.217	59.903	0.11396					33	19	2	0	0	0	0.57924	1	5101	5101		51.193	1.6567	1	238140			44586	6826	29856	29869	50460	50460					0.03573532135169444
QEAVERSM	8	Unmodified	_QEAVERSM_					0	0	0			REV__ENST00000495155.5_1_17:19186396-19216987:+|nuORF	REV__ENST00000495155.5_1_17:19186396-19216987:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.2231140136719	2	475.224017	948.43348	1.0321	0.00049049	-0.91213	-0.00043347	0.12	5.7027E-05	475.2234305961543	26.427	2.0163	26.087	25.53	27.546	-0.34035					63	45	2	0	0	0	0.90523	1	1502	1502		40.778	1.5253	1	106910	+		44587	16638	29857	29870	50461	50461					-0.04279926256356248
QEDEEVEMEA	10	Unmodified	_QEDEEVEMEA_					0	0	0		ENST00000555284.1_1_14:81736911-81745120:-|nuORF;nc|ENSG00000140022|Q8WXE9|STON2;nc|ENSG00000140022|Q8WXE9-3|STON2;ENSG00000140022|ENST00000614646|STON2	ENST00000555284.1_1_14:81736911-81745120:-|nuORF	ENST00000555284.1_1_14:81736911-81745120:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.7325439453125	2	604.734808	1207.45506	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.91	1	111.98	111.48	112.48	0.069542								0	0	0	0.45132	1	12054	12054		10.866	0	1				44588	4411	29858	29871	50462	50462					-0.14036630808959671
QEDEVMRAYL	10	Unmodified	_QEDEVMRAYL_					0	0	0		ENSG00000111229|ENST00000228825|ARPC3;ENST00000397300.2_1_11:93921617-93921950:-|nuORF	ENSG00000111229|ENST00000228825|ARPC3	ENSG00000111229|ENST00000228825|ARPC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.2955322265625	2	627.29517	1252.57579	-0.75056	-0.00047082	0.93361	0.00058565	0.18305	0.00011482	627.2956538101482	58.735	0.83465	59.127	58.775	59.61	0.39209					45	19	3	0	0	0	0.025248	3	6163	6141;6151;6163		117.81	57.693	1	2138200			44589	2561	29859	29872	50463;50464;50465	50465					-0.0403975830483887
QEDEVMRAYL	10	Unmodified	_QEDEVMRAYL_					0	0	0		ENSG00000111229|ENST00000228825|ARPC3;ENST00000397300.2_1_11:93921617-93921950:-|nuORF	ENSG00000111229|ENST00000228825|ARPC3	ENSG00000111229|ENST00000228825|ARPC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.2955322265625	2	627.29517	1252.57579	0.83846	0.00052596	-0.53249	-0.00033403	0.30598	0.00019194	627.2947528568379	58.612	0.73728	59.166	58.837	59.574	0.55323					48	17	4	0	0	0	0.018546	4	6162	6151;6162;6173;6185		123.21	61.101	1	2079000			44590	2561	29859	29872	50466;50467;50468;50469	50467					-0.0403975830483887
QEDLRTFSW	9	Unmodified	_QEDLRTFSW_					0	0	0		ENSG00000145907|ENST00000356245|G3BP1	ENSG00000145907|ENST00000356245|G3BP1	ENSG00000145907|ENST00000356245|G3BP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	591.28662109375	2	591.28292	1180.55129	-0.64084	-0.00037892	1.1637	0.0006881	0.52291	0.00030919	591.2834368525135	67.785	0.74669	67.807	67.51	68.257	0.021599					82	32	3	0	0	0	0.0030376	4	6382	6373;6382;6390;6399		139.97	57.73	1	671920			44591	4802	29860	29873	50470;50471;50472;50473	50471					-0.031766503960625414
QEDLRTFSW	9	Unmodified	_QEDLRTFSW_					0	0	0		ENSG00000145907|ENST00000356245|G3BP1	ENSG00000145907|ENST00000356245|G3BP1	ENSG00000145907|ENST00000356245|G3BP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	591.2844848632812	2	591.28292	1180.55129	0.02868	1.6958E-05	0.51552	0.00030482	0.5442	0.00032178	591.2830726695104	67.723	0.65954	67.687	67.408	68.067	-0.035698					72	25	4	0	0	0	5.5105E-05	5	6524	6500;6506;6516;6524;6530		148.99	83.184	1	749980			44592	4802	29860	29873	50474;50475;50476;50477;50478	50477					-0.031766503960625414
QEDLRTFSW	9	Unmodified	_QEDLRTFSW_					0	0	0		ENSG00000145907|ENST00000356245|G3BP1	ENSG00000145907|ENST00000356245|G3BP1	ENSG00000145907|ENST00000356245|G3BP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	591.2850952148438	2	591.28292	1180.55129	-2.1189	-0.0012529	2.4803	0.0014665	0.36133	0.00021365	591.2842583691693	67.591	0.72942	67.621	67.353	68.083	0.030563					72	27	4	0	0	0	0.034797	5	6431	6418;6422;6431;6439;6445		115.49	48.204	1	656890			44593	4802	29860	29873	50479;50480;50481;50482;50483	50481					-0.031766503960625414
QEDLRTFSW	9	Unmodified	_QEDLRTFSW_					0	0	0		ENSG00000145907|ENST00000356245|G3BP1	ENSG00000145907|ENST00000356245|G3BP1	ENSG00000145907|ENST00000356245|G3BP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	591.28292	1180.55129	-0.011832	-6.9958E-06	-0.10539	-6.2312E-05	-0.11722	-6.9308E-05	591.7837610773936	68.15	0.098145	68.114	68.067	68.165	-0.036301	0.15343	-0.001471	NaN	139.97	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19688			44594	4802	29860	29873							-0.031766503960625414
QEDLVKDVL	9	Unmodified	_QEDLVKDVL_					0	0	0		nc|ENSG00000181222|P24928|POLR2A;ENSG00000181222|ENST00000674977|POLR2A	nc|ENSG00000181222|P24928|POLR2A	nc|ENSG00000181222|P24928|POLR2A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.788818359375	2	529.790047	1057.56554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.027	1	60.418	59.918	60.918	0.39077								0	0	0	0.18209	1	6350	6350		69.628	7.5202	1				44595	7377	29861	29874	50484	50484					0.03906002032226752
QEDLVKDVL	9	Unmodified	_QEDLVKDVL_					0	0	0		nc|ENSG00000181222|P24928|POLR2A;ENSG00000181222|ENST00000674977|POLR2A	nc|ENSG00000181222|P24928|POLR2A	nc|ENSG00000181222|P24928|POLR2A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7894287109375	2	529.790047	1057.56554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.091	1	60.482	59.982	60.982	0.39077								0	0	0	0.036722	1	6360	6360		95.815	8.1187	1				44596	7377	29861	29874	50485	50485					0.03906002032226752
QEEDIKRRIN	10	Unmodified	_QEEDIKRRIN_					0	0	0		ENSG00000197980|ENST00000356539|LEKR1	ENSG00000197980|ENST00000356539|LEKR1	ENSG00000197980|ENST00000356539|LEKR1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7800598144531	3	434.237114	1299.68951	-0.30998	-0.00013461	3.6092	0.0015672	3.2992	0.0014326	434.5732120596105	64.783	1.2327	64.749	63.773	65.005	-0.034798					37	32	2	0	0	0	0.37624	1	6211	6211		14.694	0	1	52456			44597	8222	29862	29875	50486	50486					0.05165472852422681
QEEEMKIQI	9	Oxidation (M)	_QEEEM(Oxidation (M))KIQI_		QEEEM(1)KIQI		QEEEM(96)KIQI	0	0	1			REV__ENST00000446818.6_2_3:17469969-17549971:-|nuORF	REV__ENST00000446818.6_2_3:17469969-17549971:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.2825927734375	2	582.284271	1162.55399	-2.1608	-0.0012582	-0.59908	-0.00034884	-2.7598	-0.001607	582.283730076334	39.456	0.76717	39.824	39.384	40.151	0.36797					47	17	3	0	0	0	0.086373	2	3317	3286;3317		95.815	15.257	1	874600	+		44598	26812	29863	29876	50487;50488	50488		408			-0.02078563053396465
QEEEMKIQI	9	Oxidation (M)	_QEEEM(Oxidation (M))KIQI_		QEEEM(1)KIQI		QEEEM(110)KIQI	0	0	1			REV__ENST00000446818.6_2_3:17469969-17549971:-|nuORF	REV__ENST00000446818.6_2_3:17469969-17549971:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.2824096679688	2	582.284271	1162.55399	-1.6963	-0.00098775	-0.9629	-0.00056068	-2.6592	-0.0015484	582.2836225113011	39.191	1.0741	39.745	39.194	40.269	0.55449					59	24	3	0	0	0	0.051853	3	3289	3278;3289;3316		107.01	17.722	1	777860	+		44599	26812	29863	29876	50489;50490;50491	50490		408			-0.02078563053396465
QEEKPEPVL	9	Unmodified	_QEEKPEPVL_					0	0	0		ENSG00000145907|ENST00000356245|G3BP1	ENSG00000145907|ENST00000356245|G3BP1	ENSG00000145907|ENST00000356245|G3BP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.7822875976562	2	534.782222	1067.54989	-0.70511	-0.00037708	-1.107	-0.00059199	-1.8121	-0.00096907	534.782403690865	38.889	1.0197	39.231	38.98	40	0.34187					33	23	2	0	0	0	0.11055	3	3235	3223;3235;3247		90.37	35.335	1	3215600			44600	4802	29864	29877	50492;50493;50494	50493					0.01881715515196447
QEELQKLQYS	10	Unmodified	_QEELQKLQYS_					0	0	0			REV__ENSG00000204843|ENST00000628224|DCTN1	REV__ENSG00000204843|ENST00000628224|DCTN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.5497741699219	3	422.550587	1264.62993	1.0448	0.00044147	-2.9796	-0.001259	-1.9348	-0.00081755	422.54937475486224	22.6	0.68582	22.181	21.924	22.61	-0.41879					33	15	3	0	0	0	0.81117	1	921	921		38.754	6.7195	1	219190	+		44601	23522	29865	29878	50495	50495					0.008201571183917622
QEEPGKGSFW	10	Unmodified	_QEEPGKGSFW_					0	0	0		ENST00000571160.1_1_17:80540661-80543138:+|nuORF;nc|ENSG00000164916|P85037-2|FOXK1;nc|ENSG00000141568|Q01167-2|FOXK2;ENSG00000141568|ENST00000335255|FOXK2;ENSG00000164916|ENST00000328914|FOXK1	ENST00000571160.1_1_17:80540661-80543138:+|nuORF	ENST00000571160.1_1_17:80540661-80543138:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.7695922851562	2	582.769645	1163.52474	-0.74972	-0.00043691	0.50635	0.00029508	-0.24337	-0.00014183	582.7700657576331	52.381	0.77937	52.377	52.032	52.812	-0.0033035					36	19	3	0	0	0	0.42393	2	4531	4519;4531		62.107	10.772	1	153160			44602	4511	29866	29879	50496;50497	50497					-0.05048339287372983
QEEPGKGSFW	10	Unmodified	_QEEPGKGSFW_					0	0	0		ENST00000571160.1_1_17:80540661-80543138:+|nuORF;nc|ENSG00000164916|P85037-2|FOXK1;nc|ENSG00000141568|Q01167-2|FOXK2;ENSG00000141568|ENST00000335255|FOXK2;ENSG00000164916|ENST00000328914|FOXK1	ENST00000571160.1_1_17:80540661-80543138:+|nuORF	ENST00000571160.1_1_17:80540661-80543138:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.769287109375	2	582.769645	1163.52474	-0.26436	-0.00015406	0.4108	0.0002394	0.14643	8.5337E-05	582.7697552354008	52.286	0.64261	52.263	51.979	52.621	-0.023853					30	14	3	0	0	0	0.42393	1	4626	4626		62.107	5.3864	1	169680			44603	4511	29866	29879	50498	50498					-0.05048339287372983
QEESLRTYL	9	Unmodified	_QEESLRTYL_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.7902221679688	2	569.790578	1137.5666	-0.052538	-2.9936E-05	0.052684	3.0019E-05	0.00014628	8.3351E-08	569.7904913042688	52.895	0.57846	53.319	53.054	53.632	0.42348					42	13	4	0	0	0	0.18338	1	5316	5316		77.318	5.4401	1	1612000			44604	7581	29867	29880	50499	50499					0.0033221640117062634
QEESLRTYL	9	Unmodified	_QEESLRTYL_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.7903442382812	2	569.790578	1137.5666	0.56825	0.00032379	-0.7141	-0.00040689	-0.14585	-8.3101E-05	569.7901550003997	52.67	1.0734	53.284	52.623	53.696	0.61436					52	25	4	0	0	0	0.15708	2	5306	5296;5306		82.75	5.3864	1	1652900			44605	7581	29867	29880	50500;50501	50501					0.0033221640117062634
QEESQLTEKTK	11	Unmodified	_QEESQLTEKTK_					0	0	0			REV__ENSG00000137101|ENST00000259633|CD72	REV__ENSG00000137101|ENST00000259633|CD72	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.8931884765625	3	440.892901	1319.65687	-0.33489	-0.00014765	-0.0085883	-3.7865E-06	-0.34348	-0.00015144	440.8932298445933	32.635	0.76971	32.761	32.332	33.102	0.12642					51	17	4	0	0	0	0.59831	1	2288	2288		44.639	0	1	819560	+		44606	19360	29868	29881	50502	50502					0.00983220938883278
QEETGAKISVL	11	Unmodified	_QEETGAKISVL_					0	0	0		ENST00000307714.12_1_1:32479575-32503673:+|nuORF;nc|ENSG00000121774|Q07666-2|KHDRBS1;ENSG00000121774|ENST00000327300|KHDRBS1	ENST00000307714.12_1_1:32479575-32503673:+|nuORF	ENST00000307714.12_1_1:32479575-32503673:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.8194580078125	2	587.819335	1173.62412	-1.5517	-0.00091215	1.3205	0.00077624	-0.2312	-0.00013591	587.8199548059002	47.652	0.6911	48.121	47.815	48.506	0.46941					48	17	4	0	0	0	1.0003E-05	4	4543	4533;4543;4556;4568		143.37	66.056	1	2486000			44607	3197	29869	29882	50503;50504;50505;50506	50504					0.04425058606716448
QEETGAKISVL	11	Unmodified	_QEETGAKISVL_					0	0	0		ENST00000307714.12_1_1:32479575-32503673:+|nuORF;nc|ENSG00000121774|Q07666-2|KHDRBS1;ENSG00000121774|ENST00000327300|KHDRBS1	ENST00000307714.12_1_1:32479575-32503673:+|nuORF	ENST00000307714.12_1_1:32479575-32503673:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.81982421875	2	587.819335	1173.62412	-0.87816	-0.0005162	0.45918	0.00026991	-0.41898	-0.00024629	587.8195252522253	47.464	0.70281	48.387	48.081	48.784	0.92315					47	17	4	0	0	0	1.6929E-38	3	4533	4523;4533;4544		187.5	78.026	1	2875100			44608	3197	29869	29882	50507;50508;50509	50508					0.04425058606716448
QEFGVPHQY	9	Unmodified	_QEFGVPHQY_					0	0	0		ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-3|OGA	ENSG00000198408|ENST00000361464|OGA	ENSG00000198408|ENST00000361464|OGA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.7581787109375	2	552.759081	1103.50361	-0.55958	-0.00030931	0.32666	0.00018056	-0.23292	-0.00012875	552.7590198768517	49.262	0.70812	49.259	48.783	49.491	-0.0030327					39	15	3	0	0	0	0.64922	1	4106	4106		44.117	5.3107	1	208980			44609	8270	29870	29883	50510	50510					-0.04400304596242677
QEFGVPHQY	9	Unmodified	_QEFGVPHQY_					0	0	0		ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-3|OGA	ENSG00000198408|ENST00000361464|OGA	ENSG00000198408|ENST00000361464|OGA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.7587890625	2	552.759081	1103.50361	-0.15488	-8.5611E-05	-0.075564	-4.1769E-05	-0.23044	-0.00012738	552.7588375859833	49.202	0.92498	49.178	48.619	49.544	-0.024033					46	20	3	0	0	0	0.58668	1	4210	4210		47.657	12.039	1	174440			44610	8270	29870	29883	50511	50511					-0.04400304596242677
QEFVLLDPD	9	Unmodified	_QEFVLLDPD_					0	0	0			REV__ENSG00000205693|ENST00000381273|MANSC4	REV__ENSG00000205693|ENST00000381273|MANSC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.7683715820312	2	538.268947	1074.52334	1.5134	0.00081462	1.7842	0.00096036	3.2976	0.001775	538.2698280497401	24.726	0.88437	24.212	23.615	24.499	-0.51365					33	19	3	0	0	0	0.20789	1	1208	1208		39.253	0	1	276540	+		44611	23571	29871	29884	50512	50512					-0.010939733761233583
QEGEKRLTK	9	Unmodified	_QEGEKRLTK_					0	0	0		ENST00000380259.6_2_11:5276313-5367061:-|nuORF	ENST00000380259.6_2_11:5276313-5367061:-|nuORF	ENST00000380259.6_2_11:5276313-5367061:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	544.8060913085938	2	544.806562	1087.59857	0.026613	1.4499E-05	-0.12454	-6.785E-05	-0.097928	-5.3352E-05	544.8064273929182	24.934	1.2168	24.992	24.613	25.83	0.058189					124	57	4	0	0	0	0.41566	1	872	872		56.721	0	1	915340			44612	10917	29872	29885	50513	50513					0.05827628874931179
QEGKALLPKSA	11	Unmodified	_QEGKALLPKSA_					0	0	0			REV__ENST00000481182.1_1_19:36206000-36206174:+|nuORF	REV__ENST00000481182.1_1_19:36206000-36206174:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3310546875	2	571.332413	1140.65027	0.55864	0.00031917	-3.1127	-0.0017784	-2.554	-0.0014592	571.3306168800059	102.04	2.573	102.24	101.51	104.08	0.19484					133	63	4	0	0	0	0.70584	1	10810	10810		30.569	3.876	1	4021100	+		44613	27432	29873	29886	50514	50514					0.08557372568861865
QEGLPLEHVAG	11	Unmodified	_QEGLPLEHVAG_					0	0	0		ENSG00000099899|ENST00000252136|TRMT2A;ENST00000494820.5_1_22:20100432-20103278:-|nuORF;nc|ENSG00000099899|Q8IZ69-2|TRMT2A	ENSG00000099899|ENST00000252136|TRMT2A	ENSG00000099899|ENST00000252136|TRMT2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.2987670898438	2	575.29857	1148.58259	-0.62013	-0.00035676	-1.2651	-0.0007278	-1.8852	-0.0010846	575.2976575807905	42.796	0.68694	42.766	42.497	43.184	-0.029461					33	16	3	0	0	0	0.7144	1	3244	3244		29.17	0	1	227850			44614	1774	29874	29887	50515	50515					0.014239226380595937
QEGNSKVSQK	10	Unmodified	_QEGNSKVSQK_					0	0	0		nc|ENSG00000184313|Q68CQ1-1|MROH7;ENSG00000184313|ENST00000421030|MROH7	nc|ENSG00000184313|Q68CQ1-1|MROH7	nc|ENSG00000184313|Q68CQ1-1|MROH7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.81591796875	2	552.785827	1103.5571	0.84645	0.0004679	3.9991	0.0022106	4.8455	0.0026785	552.7879586702386	28.31	0.57532	28.137	27.934	28.51	-0.17336					22	14	3	0	0	0	0.37624	1	1744	1744		41.427	0	1	80055			44615	7600	29875	29888	50516	50516					0.009464481156101101
QEILNLSEAG	10	Unmodified	_QEILNLSEAG_					0	0	0		ENSG00000215421|ENST00000299687|ZNF407;ENST00000579200.1_1_18:72775002-72776421:+|nuORF	ENSG00000215421|ENST00000299687|ZNF407	ENSG00000215421|ENST00000299687|ZNF407	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.2774658203125	2	537.277303	1072.54005	0.32498	0.00017461	0.94665	0.00050862	1.2716	0.00068322	537.2775627719318	24.386	0.89183	24.017	23.588	24.48	-0.36965					38	19	3	0	0	0	0.60985	1	1195	1195		49.536	5.1589	1	302720			44616	8652	29876	29889	50517	50517					0.006685275098107013
QEIPVNVRF	9	Unmodified	_QEIPVNVRF_					0	0	0		ENSG00000133313|ENST00000324262|CNDP2	ENSG00000133313|ENST00000324262|CNDP2	ENSG00000133313|ENST00000324262|CNDP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.3065185546875	2	551.306198	1100.59784	-0.64986	-0.00035827	0.44132	0.0002433	-0.20854	-0.00011497	551.3062723835128	64.068	0.78235	64.067	63.719	64.502	-0.00078583					57	26	3	0	0	0	0.19818	1	5959	5959		74.255	20.904	1	381510			44617	3871	29877	29890	50518	50518					0.051568342258860866
QEIPVNVRF	9	Unmodified	_QEIPVNVRF_					0	0	0		ENSG00000133313|ENST00000324262|CNDP2	ENSG00000133313|ENST00000324262|CNDP2	ENSG00000133313|ENST00000324262|CNDP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.3070678710938	2	551.306198	1100.59784	0.43781	0.00024137	-0.45107	-0.00024868	-0.013261	-7.311E-06	551.3057736322827	63.898	0.75933	63.864	63.577	64.337	-0.034256					55	22	3	0	0	0	0.19818	4	6061	6053;6061;6069;6080		74.255	11.271	1	474780			44618	3871	29877	29890	50519;50520;50521;50522	50520					0.051568342258860866
QEIPVNVRF	9	Unmodified	_QEIPVNVRF_					0	0	0		ENSG00000133313|ENST00000324262|CNDP2	ENSG00000133313|ENST00000324262|CNDP2	ENSG00000133313|ENST00000324262|CNDP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.30615234375	2	551.306198	1100.59784	-0.34137	-0.0001882	0.30277	0.00016692	-0.038596	-2.1278E-05	551.3061719414285	63.787	0.76929	63.814	63.476	64.246	0.027142					59	24	4	0	0	0	0.18601	2	5977	5968;5977		76.774	30.802	1	504530			44619	3871	29877	29890	50523;50524	50524					0.051568342258860866
QEIQSENLI	9	Unmodified	_QEIQSENLI_					0	0	0		ENSG00000126016|ENST00000371959|AMOT	ENSG00000126016|ENST00000371959|AMOT	ENSG00000126016|ENST00000371959|AMOT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.2750854492188	2	537.277303	1072.54005	1.2388	0.00066558	0.7175	0.0003855	1.9563	0.0010511	537.2771822937506	24.304	0.91818	23.79	23.408	24.326	-0.51365					46	20	4	0	0	0	0.75725	1	1198	1198		36.447	0	1	351380			44620	3438	29878	29891	50525	50525					0.006685275098107013
QEIQVLRVVKN	11	Unmodified	_QEIQVLRVVKN_					0	0	0		ENSG00000065833|ENST00000369705|ME1	ENSG00000065833|ENST00000369705|ME1	ENSG00000065833|ENST00000369705|ME1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.6011962890625	3	442.601504	1324.78268	1.7929	0.00079355	-2.9372	-0.0013	-1.1443	-0.00050647	442.6001215105029	103.71	1.4704	103.75	103.32	104.79	0.041481					92	35	4	0	0	0	0.77205	1	11313	11313		17.167	1.2461	1	665090			44621	1142	29879	29892	50526	50526					0.13328397305645012
QEISTVEGSY	10	Unmodified	_QEISTVEGSY_					0	0	0		ENST00000485604.1_1_20:34458944-34459771:+|nuORF	ENST00000485604.1_1_20:34458944-34459771:+|nuORF	ENST00000485604.1_1_20:34458944-34459771:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.7568969726562	2	556.758943	1111.50333	-0.83663	-0.0004658	-2.4786	-0.00138	-3.3152	-0.0018458	556.7575145907471	39.081	0.85041	39.423	39.149	40	0.34187					37	19	2	0	0	0	0.73395	1	3248	3248		42.864	11.334	1	606570			44622	12560	29880	29893	50527	50527					-0.047957691067495034
QEIYILAVL	9	Unmodified	_QEIYILAVL_					0	0	0			REV__ENSG00000206536|ENST00000383695|OR5K3	REV__ENSG00000206536|ENST00000383695|OR5K3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3190307617188	2	531.3157	1060.61685	2.5638	0.0013622	4.2767	0.0022723	6.8404	0.0036344	531.3177191515188	95.1	2.5434	95.042	94.557	97.1	-0.057526					188	59	5	0	0	0	0.78536	1	10134	10134		29.15	1.2673	1	4072600	+		44623	23591	29881	29894	50528	50528					0.0889637079694694
QEKGGQVLW	9	Unmodified	_QEKGGQVLW_					0	0	0			REV__nc|ENSG00000104055|O43548-2|TGM5	REV__nc|ENSG00000104055|O43548-2|TGM5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3713989257812	2	522.777274	1043.53999	-0.27997	-0.00014636	1.9992	0.0010451	1.7192	0.00089877	522.7789885041448	36.262	0.26353	36.293	36.153	36.416	0.031132					10	6	2	0	0	0	0.20789	1	1976	1976		25.574	9.1009	1	50562	+		44624	17433	29882	29895	50529	50529					0.019965723004588654
QEKLALRLD	9	Unmodified	_QEKLALRLD_					0	0	0		ENSG00000186103|ENST00000334384|ARGFX	ENSG00000186103|ENST00000334384|ARGFX	ENSG00000186103|ENST00000334384|ARGFX	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.8099365234375	2	543.319306	1084.62406	0.041746	2.2681E-05	-0.09659	-5.2479E-05	-0.054844	-2.9798E-05	543.3198625686662	16.546	0.1832	15.947	15.832	16.015	-0.59873					6	3	2	0	0	0	0.20789	1	138	138		32.751	0	1	37422			44625	7773	29883	29896	50530	50530					0.08513103397353916
QEKLPDEVVL	10	Unmodified	_QEKLPDEVVL_					0	0	0		nc|ENSG00000138081|Q86XK2-3|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11;ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-4|FBXO11	nc|ENSG00000138081|Q86XK2-3|FBXO11	nc|ENSG00000138081|Q86XK2-3|FBXO11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.3262939453125	2	585.324254	1168.63395	-0.71761	-0.00042004	0.73119	0.00042798	0.013575	7.946E-06	585.3244266120178	59.508	0.6635	60.061	59.692	60.355	0.55323					36	16	3	0	0	0	0.42393	1	6293	6293		62.107	0	1	928540			44626	4267	29884	29897	50531	50531					0.05638246612079456
QEKSKVGKL	9	Unmodified	_QEKSKVGKL_					0	0	0		nc|ENSG00000152969|Q96N16-3|JAKMIP1;nc|ENSG00000152969|Q96N16-4|JAKMIP1;nc|ENSG00000152969|Q96N16|JAKMIP1;ENSG00000152969|ENST00000409021|JAKMIP1	nc|ENSG00000152969|Q96N16-3|JAKMIP1	nc|ENSG00000152969|Q96N16-3|JAKMIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.80743408203125	2	508.808574	1015.60259	0.84861	0.00043178	-3.1233	-0.0015892	-2.2747	-0.0011574	508.8072597473503	83.541	2.7911	83.472	82.015	84.806	-0.069313					129	64	3	0	0	0	0.78124	1	8484	8484		30.318	2.2362	1	2497800			44627	5205	29885	29898	50532	50532					0.09541718368666352
QELAERGVRIV	11	Unmodified	_QELAERGVRIV_					0	0	0		nc|ENSG00000253485|Q9Y5G8-2|PCDHGA5;ENSG00000253485|ENST00000518069|PCDHGA5	nc|ENSG00000253485|Q9Y5G8-2|PCDHGA5	nc|ENSG00000253485|Q9Y5G8-2|PCDHGA5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8928833007812	2	635.367318	1268.72008	-0.1276	-8.1072E-05	-0.54721	-0.00034768	-0.67481	-0.00042875	635.3660743642795	105.98	0.35771	105.96	105.7	106.05	-0.025146					11	8	2	0	0	0	0.17502	1	11493	11493		52.937	5.2794	1	246190			44628	8859	29886	29899	50533	50533					0.096472512374703
QELAKKSIL	9	Unmodified	_QELAKKSIL_					0	0	0		nc|ENSG00000164542|Q8NCT3-4|MATCAP2;ENST00000493327.1_1_7:36396426-36406798:-|nuORF;nc|ENSG00000164542|Q8NCT3-3|MATCAP2;nc|ENSG00000164542|Q8NCT3-2|MATCAP2;ENSG00000164542|ENST00000440378|MATCAP2;nc|ENSG00000164542|Q8NCT3|MATCAP2	nc|ENSG00000164542|Q8NCT3-4|MATCAP2	nc|ENSG00000164542|Q8NCT3-4|MATCAP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	515.3233642578125	2	515.318774	1028.623	-1.8341	-0.00094513	-3.1291	-0.0016125	-4.9632	-0.0025576	515.317055688421	21.039	0.73342	21.039	20.572	21.306	0					48	34	2	0	0	0	0.7932	1	543	543		24.519	1.4767	1	37245			44629	5975	29887	29900	50534	50534					0.1098288902846889
QELDDILKF	9	Unmodified	_QELDDILKF_					0	0	0		ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4;nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170004|Q12873-2|CHD3;ENSG00000170004|ENST00000330494|CHD3;ENSG00000116254|ENST00000262450|CHD5	ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000170004|Q12873-3|CHD3;ENSG00000116254|ENST00000262450|CHD5	nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.7969970703125	2	560.797872	1119.58119	0.80766	0.00045293	-1.3314	-0.00074664	-0.52373	-0.00029371	560.7971860774161	80.48	0.66477	80.536	80.286	80.951	0.055916					29	15	3	0	0	0	0.26953	1	7993	7993		67.494	8.7117	1	132120			44630	15087;2592;2911	29888	29901	50535	50535					0.026182885492971764
QELDDILKF	9	Unmodified	_QELDDILKF_					0	0	0		ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4;nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170004|Q12873-2|CHD3;ENSG00000170004|ENST00000330494|CHD3;ENSG00000116254|ENST00000262450|CHD5	ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000170004|Q12873-3|CHD3;ENSG00000116254|ENST00000262450|CHD5	nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	560.797872	1119.58119	0.65712	0.00036851	-1.0007	-0.0005612	-0.34361	-0.00019269	560.7973334997787	80.631	0.5225	80.571	80.319	80.841	-0.059685	-0.011342	-0.00015185	NaN	67.494	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133380			44631	15087;2592;2911	29888	29901							0.026182885492971764
QELECWMSV	9	Unmodified	_QELECWMSV_					0	0	0			REV__ENST00000468868.1_1_7:48017962-48019116:-|nuORF	REV__ENST00000468868.1_1_7:48017962-48019116:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.7430419921875	2	562.741185	1123.46782	-1.1289	-0.00063527	1.8594	0.0010464	0.73055	0.00041111	562.7420463479946	37.258	0.58012	37.234	37.037	37.617	-0.023979					28	12	3	0	0	0	0.77696	1	2443	2443		31.53	1.0262	1	139270	+		44632	19302	29889	29902	50536	50536					-0.08897846159788969
QELEEHQLI	9	Unmodified	_QELEEHQLI_					0	0	0		nc|ENSG00000165288|Q6RI45-5|BRWD3;ENSG00000165288|ENST00000373275|BRWD3;ENST00000478415.1_1_X:79999455-80064970:-|nuORF	nc|ENSG00000165288|Q6RI45-5|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.7904052734375	2	569.790578	1137.5666	0.56825	0.00032379	-0.7141	-0.00040689	-0.14585	-8.3101E-05	569.7901550003997	52.67	1.0734	53.284	52.623	53.696	0.61436					52	25	4	0	0	0	0.18338	1	5319	5319		77.318	10.888	1	1652900			44633	6069	29890	29903	50537	50537					0.0033221640114788897
QELEKLKRRL	10	Unmodified	_QELEKLKRRL_					0	0	0		nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;ENSG00000105357|ENST00000642316|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14	nc|ENSG00000105357|Q7Z406-4|MYH14	nc|ENSG00000105357|Q7Z406-4|MYH14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.27325439453125	3	438.273499	1311.79867	2.0595	0.00090261	-3.3503	-0.0014684	-1.2909	-0.00056576	438.2719380139852	107.11	1.2259	107.15	106.67	107.9	0.035614					128	28	5	0	0	0	0.86409	1	11726	11726		25.126	0.89417	1	4659700			44634	2207	29891	29904	50538	50538					0.15524103542543344
QELFVTMFF	9	Unmodified	_QELFVTMFF_					0	0	0			REV__ENSG00000141873|ENST00000269740|SLC39A3	REV__ENSG00000141873|ENST00000269740|SLC39A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8645629882812	2	581.286085	1160.55762	-1.7823	-0.001036	-1.7572	-0.0010214	-3.5395	-0.0020575	581.2850020597235	62.956	1.0804	63.344	62.968	64.049	0.38779					43	24	2	0	0	0	0.20789	1	6713	6713		51.335	0	1	150570	+		44635	19713	29892	29905	50539	50539					-0.01623848488884505
QELIEASNW	9	Unmodified	_QELIEASNW_					0	0	0		ENSG00000109911|ENST00000640961|ELP4;nc|ENSG00000109911|Q96EB1-3|ELP4;nc|ENSG00000109911|Q96EB1-2|ELP4	ENSG00000109911|ENST00000640961|ELP4	ENSG00000109911|ENST00000640961|ELP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.2647094726562	2	545.264196	1088.51384	-0.25462	-0.00013883	-0.1898	-0.00010349	-0.44442	-0.00024233	545.2639698481355	52.782	0.64312	52.779	52.51	53.153	-0.0033035					32	18	2	0	0	0	0.14236	1	4573	4573		85.161	0	1	171760			44636	2490	29893	29906	50540	50540					-0.026877416616798655
QELIIPCLA	9	Carbamidomethyl (C)	_QELIIPC(Carbamidomethyl (C))LA_	QELIIPC(1)LA		QELIIPC(100)LA		0	1	0		nc|ENSG00000166946|O95273-2|CCNDBP1;ENSG00000166946|ENST00000300213|CCNDBP1;ENST00000568936.1_1_15:43482505-43485079:+|nuORF;nc|ENSG00000166946|O95273-4|CCNDBP1;ENST00000566882.5_1_15:43482236-43485079:+|nuORF;nc|ENSG00000166946|O95273-3|CCNDBP1;ENST00000564630.5_1_15:43478389-43485079:+|nuORF;ENST00000569745.5_1_15:43477607-43487036:+|nuORF;ENST00000563065.5_1_15:43477607-43487036:+|nuORF	nc|ENSG00000166946|O95273-2|CCNDBP1	nc|ENSG00000166946|O95273-2|CCNDBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.793212890625	2	528.791535	1055.56852	1.5726	0.00083159	1.8337	0.00096964	3.4063	0.0018012	528.7924826805944	35.727	2.3531	36.168	35.922	38.275	0.44043					117	58	5	0	0	0	0.062302	1	2762	2762		102.77	14.596	1	18377000			44637	6251	29894	29907	50541	50541	78				0.04295553885390291
QELILQISEGR	11	Unmodified	_QELILQISEGR_					0	0	0		ENST00000555109.1_1_14:24970801-24977459:+|nuORF	ENST00000555109.1_1_14:24970801-24977459:+|nuORF	ENST00000555109.1_1_14:24970801-24977459:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3733520507812	2	643.359159	1284.70376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.13	1	115.11	114.61	115.61	-0.02433								0	0	0	0.56276	1	12755	12755		33.922	1.1092	1				44638	13729	29895	29908	50542	50542					0.07280125280703942
QELILQISEGR	11	Unmodified	_QELILQISEGR_					0	0	0		ENST00000555109.1_1_14:24970801-24977459:+|nuORF	ENST00000555109.1_1_14:24970801-24977459:+|nuORF	ENST00000555109.1_1_14:24970801-24977459:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3685913085938	2	643.359159	1284.70376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.29	1	115.27	114.77	115.77	-0.02433								0	0	0	0.56276	1	12771	12771		38.754	11.706	1				44639	13729	29895	29908	50543	50543					0.07280125280703942
QELIQLEHE	9	Unmodified	_QELIQLEHE_					0	0	0			REV__ENSG00000165392|ENST00000298139|WRN	REV__ENSG00000165392|ENST00000298139|WRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.7903442382812	2	569.790578	1137.5666	-0.052538	-2.9936E-05	0.052684	3.0019E-05	0.00014628	8.3351E-08	569.7904913042688	52.895	0.57846	53.319	53.054	53.632	0.42348					42	13	4	0	0	0	0.18338	1	5328	5328		77.318	2.2743	1	1612000	+		44640	21180	29896	29909	50544	50544					0.0033221640114788897
QELKEIWR	8	Unmodified	_QELKEIWR_					0	0	0		ENST00000478742.1_1_1:203148575-203149107:-|nuORF	ENST00000478742.1_1_1:203148575-203149107:-|nuORF	ENST00000478742.1_1_1:203148575-203149107:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.3058471679688	2	551.306198	1100.59784	-0.64986	-0.00035827	0.44132	0.0002433	-0.20854	-0.00011497	551.3062723835128	64.068	0.78235	64.067	63.719	64.502	-0.00078583					57	26	3	0	0	0	0.66521	1	5951	5951		68.787	5.4806	1	381510			44641	12398	29897	29910	50545	50545					0.05156834225863349
QELKNKYYQV	10	Unmodified	_QELKNKYYQV_					0	0	0		ENSG00000162645|ENST00000370466|GBP2	ENSG00000162645|ENST00000370466|GBP2	ENSG00000162645|ENST00000370466|GBP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2629699707031	3	438.23471	1311.6823	-0.11444	-5.015E-05	-2.2009	-0.00096453	-2.3154	-0.0010147	438.23351820589954	40.27	0.19895	40.222	40.046	40.245	-0.04789					7	5	2	0	0	0	0.37624	1	2528	2528		19.263	1.4295	1	142790			44642	5712	29898	29911	50546	50546					0.038927402519675525
QELLEKKRR	9	Unmodified	_QELLEKKRR_					0	0	0			REV__nc|ENSG00000137474|Q13402-5|MYO7A	REV__nc|ENSG00000137474|Q13402-5|MYO7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5798645019531	3	400.578811	1198.7146	3.4049	0.0013639	0.73898	0.00029602	4.1439	0.00166	400.5790813057724	111.94	0.27284	111.98	111.85	112.12	0.041832					15	8	2	0	0	0	0.7932	1	13547	13547		26.063	3.5018	1	217270	+		44643	19385	29899	29912	50547	50547					0.12319572445630911
QELLTAGH	8	Unmodified	_QELLTAGH_					0	0	0		ENSG00000100154|ENST00000397906|TTC28	ENSG00000100154|ENST00000397906|TTC28	ENSG00000100154|ENST00000397906|TTC28	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7799987792969	2	434.729792	867.445031	-0.35714	-0.00015526	-0.23508	-0.0001022	-0.59222	-0.00025746	434.72974812782803	38.52	0.33348	39.043	38.87	39.204	0.52235					12	7	3	0	0	0	0.4196	1	3170	3170		25.45	17.219	1	47350			44644	1803	29900	29913	50548	50548					0.006006388292917109
QELMSLQNL	9	Oxidation (M)	_QELM(Oxidation (M))SLQNL_		QELM(1)SLQNL		QELM(51)SLQNL	0	0	1		nc|ENSG00000219186|P0C7X4|FTH1P19	nc|ENSG00000219186|P0C7X4|FTH1P19	nc|ENSG00000219186|P0C7X4|FTH1P19	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.2734375	2	546.273706	1090.53286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.83	1	29.855	29.355	30.355	0.025013								0	0	0	0.37639	1	1501	1501		51.193	11.94	1				44645	15257	29901	29914	50549	50549		220			-0.008785283622728457
QELNDRFANY	10	Unmodified	_QELNDRFANY_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF;ENSG00000175084|ENST00000373960|DES	ENSG00000026025|ENST00000544301|VIM;ENSG00000175084|ENST00000373960|DES	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	635.7998657226562	2	635.296559	1268.57856	0.43365	0.0002755	0.0041959	2.6656E-06	0.43784	0.00027816	635.296368438589	51.118	0.44579	51.126	50.903	51.349	0.0077477					20	12	2	0	0	0	0.82886	1	4399	4399		37.812	0.30334	1	151890			44646	869;6989	29902	29915	50550	50550					-0.04498166855637464
QELQEINRVY	10	Unmodified	_QELQEINRVY_					0	0	0		nc|ENSG00000231991|A6NMY6|ANXA2P2;ENSG00000182718|ENST00000451270|ANXA2;nc|ENSG00000182718|P07355-2|ANXA2	nc|ENSG00000231991|A6NMY6|ANXA2P2	nc|ENSG00000231991|A6NMY6|ANXA2P2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	646.3355102539062	2	646.335684	1290.65681	0.079793	5.1573E-05	0.057484	3.7154E-05	0.13728	8.8727E-05	646.3356867243526	52.361	0.74214	52.358	52.069	52.812	-0.0033035					32	18	2	0	0	0	0.00018268	5	4523	4511;4523;4535;4547;4557		145.46	63.936	1	494420			44647	7470	29903	29916	50551;50552;50553;50554;50555	50552					0.023112657295769168
QELQEINRVY	10	Unmodified	_QELQEINRVY_					0	0	0		nc|ENSG00000231991|A6NMY6|ANXA2P2;ENSG00000182718|ENST00000451270|ANXA2;nc|ENSG00000182718|P07355-2|ANXA2	nc|ENSG00000231991|A6NMY6|ANXA2P2	nc|ENSG00000231991|A6NMY6|ANXA2P2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	646.3359985351562	2	646.335684	1290.65681	-0.80592	-0.00052089	0.98722	0.00063808	0.1813	0.00011718	646.3362800955812	52.328	0.80746	52.305	51.938	52.746	-0.023849					43	18	3	0	0	0	0.17795	5	4613	4601;4613;4624;4636;4649		91.265	33.035	1	529770			44648	7470	29903	29916	50556;50557;50558;50559;50560	50557					0.023112657295769168
QELQEINRVY	10	Unmodified	_QELQEINRVY_					0	0	0		nc|ENSG00000231991|A6NMY6|ANXA2P2;ENSG00000182718|ENST00000451270|ANXA2;nc|ENSG00000182718|P07355-2|ANXA2	nc|ENSG00000231991|A6NMY6|ANXA2P2	nc|ENSG00000231991|A6NMY6|ANXA2P2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	646.3355712890625	2	646.335684	1290.65681	0.91101	0.00058882	-1.1069	-0.00071542	-0.19587	-0.0001266	646.3349429242918	52.327	0.82375	52.339	51.925	52.748	0.012436					41	18	3	0	0	0	5.5944E-07	4	4561	4540;4551;4561;4574		152.06	66.199	1	579770			44649	7470	29903	29916	50561;50562;50563;50564	50563					0.023112657295769168
QELRTKPAG	9	Unmodified	_QELRTKPAG_					0	0	0		nc|ENSG00000140859|Q9BVG8-4|KIFC3;ENSG00000140859|ENST00000445690|KIFC3;nc|ENSG00000140859|Q9BVG8|KIFC3;nc|ENSG00000140859|Q9BVG8-6|KIFC3;nc|ENSG00000140859|Q9BVG8-5|KIFC3	nc|ENSG00000140859|Q9BVG8-4|KIFC3	nc|ENSG00000140859|Q9BVG8-4|KIFC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.3064270019531	2	500.282723	998.550893	0.45581	0.00022803	1.5163	0.0007586	1.9721	0.00098663	500.28340203579046	16.591	0.18278	15.992	15.924	16.107	-0.59873					5	3	2	0	0	0	0.19797	1	153	153		79.713	0.26157	1	17593			44650	4462	29904	29917	50565	50565					0.05155974674744357
QELSQLEAS	9	Unmodified	_QELSQLEAS_					0	0	0			REV__ENSG00000102189|ENST00000322349|EEA1	REV__ENSG00000102189|ENST00000322349|EEA1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.81365966796875	2	502.748379	1003.4822	-0.061838	-3.1089E-05	-2.9764	-0.0014964	-3.0382	-0.0015274	502.7466559270761	97.529	0.12558	97.586	97.507	97.632	0.056839					4	2	2	0	0	0	0.20789	1	10275	10275		66.429	3.123	1	28737	+		44651	17330	29905	29918	50566	50566					-0.019397344156232066
QELTLLLF	8	Unmodified	_QELTLLLF_					0	0	0			REV__nc|nan|Q9BVC5-2|C2orf49	REV__nc|nan|Q9BVC5-2|C2orf49	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.78887939453125	2	488.789318	975.564084	1.4412	0.00070445	-1.6239	-0.00079376	-0.18272	-8.931E-05	488.78836786844454	102.14	0.87674	102.4	102.03	102.91	0.26323					61	21	5	0	0	0	0.37614	1	12399	12399		88.643	0	1	1967000	+		44652	19277	29906	29919	50567	50567					0.07532412734155969
QELTLLLF	8	Unmodified	_QELTLLLF_					0	0	0			REV__nc|nan|Q9BVC5-2|C2orf49	REV__nc|nan|Q9BVC5-2|C2orf49	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7890930175781	2	488.789318	975.564084	2.6694	0.0013048	-2.8817	-0.0014085	-0.21227	-0.00010375	488.7877664062211	102.11	0.80855	102.41	102.13	102.94	0.29864					53	18	4	0	0	0	0.37614	1	12458	12458		88.643	0	1	2328000	+		44653	19277	29906	29919	50568	50568					0.07532412734155969
QELYTESLR	9	Unmodified	_QELYTESLR_					0	0	0			REV__ENSG00000161040|ENST00000440067|FBXL13	REV__ENSG00000161040|ENST00000440067|FBXL13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.7904052734375	2	569.790578	1137.5666	-0.052538	-2.9936E-05	0.052684	3.0019E-05	0.00014628	8.3351E-08	569.7904913042688	52.895	0.57846	53.319	53.054	53.632	0.42348					42	13	4	0	0	0	0.73802	1	5305	5305		37.812	2.1932	1	1612000	+		44654	20761	29907	29920	50569	50569					0.0033221640114788897
QEMGHRRA	8	Unmodified	_QEMGHRRA_					0	0	0		ENSG00000090376|ENST00000261233|IRAK3	ENSG00000090376|ENST00000261233|IRAK3	ENSG00000090376|ENST00000261233|IRAK3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.27435302734375	2	492.743242	983.471931	-1.1991	-0.00059084	3.9048	0.0019241	2.7058	0.0013332	492.74476558147717	48.568	1.1669	49.037	48.466	49.633	0.46941					41	28	2	0	0	0	0.4196	1	4653	4653		10.265	0	1	142580			44655	1643	29908	29921	50570	50570					-0.020465758311729587
QENLVKTGR	9	Unmodified	_QENLVKTGR_					0	0	0		nc|ENSG00000242715|A6NNP5-5|CCDC169;ENSG00000242715|ENST00000239859|CCDC169	nc|ENSG00000242715|A6NNP5-5|CCDC169	nc|ENSG00000242715|A6NNP5-5|CCDC169	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.793701171875	2	522.793455	1043.57236	1.2723	0.00066513	-1.5156	-0.00079234	-0.24333	-0.00012721	522.7925484697116	21.895	1.1217	21.452	20.87	21.992	-0.44324					57	25	4	0	0	0	0.34325	1	852	852		61.691	1.573	1	389000			44656	8801	29909	29922	50571	50571					0.05231359703475391
QENRDPQQAFR	11	Unmodified	_QENRDPQQAFR_					0	0	0		ENSG00000117477|ENST00000367806|CCDC181	ENSG00000117477|ENST00000367806|CCDC181	ENSG00000117477|ENST00000367806|CCDC181	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2128601074219	3	463.560368	1387.65927	0.089521	4.1499E-05	-0.34858	-0.00016159	-0.25906	-0.00012009	463.55998708143204	24.208	0.44272	23.826	23.62	24.062	-0.38178					12	9	2	0	0	0	0.17729	1	1124	1124		12.957	0.52465	1	41733			44657	2980	29910	29923	50572	50572					-0.019048858127689527
QENRDPQQAFR	11	Unmodified	_QENRDPQQAFR_					0	0	0		ENSG00000117477|ENST00000367806|CCDC181	ENSG00000117477|ENST00000367806|CCDC181	ENSG00000117477|ENST00000367806|CCDC181	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	463.560368	1387.65927	1.3277	0.00061547	-1.3196	-0.00061171	0.0081191	3.7637E-06	463.5596154794737	24.151	0.25203	23.638	23.494	23.746	-0.51365	-0.094283	-0.0006716	NaN	8.7993	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50256			44658	2980	29910	29923							-0.019048858127689527
QEPALLVLPL	10	Unmodified	_QEPALLVLPL_					0	0	0		ENST00000448759.1_1_1:43352960-43353698:-|nuORF	ENST00000448759.1_1_1:43352960-43353698:-|nuORF	ENST00000448759.1_1_1:43352960-43353698:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.8406982421875	2	546.8368	1091.65905	2.1574	0.0011797	3.8395	0.0020996	5.9968	0.0032793	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.84112	2	12223	12223;12322		37.159	1.5408	1	10074000			44659	11863	29911	29924	50573;50574	50573					0.11688346205323796
QEPEKAERKH	10	Unmodified	_QEPEKAERKH_					0	0	0			REV__ENSG00000042980|ENST00000265769|ADAM28	REV__ENSG00000042980|ENST00000265769|ADAM28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3283081054688	2	626.32565	1250.63675	-0.15906	-9.9625E-05	3.3961	0.0021271	3.2371	0.0020275	626.3277543404057	53.246	0.94266	53.242	52.744	53.687	-0.0033035					65	25	3	0	0	0	0.86549	1	4632	4632		24.519	0	1	196380	+		44660	16332	29912	29925	50575	50575					0.02145514789617664
QEQLKLRV	8	Unmodified	_QEQLKLRV_					0	0	0			REV__chr1:234607852-234608022|33|27.3|0.62|5.46|-|0|IRF2BP2,None|1	REV__chr1:234607852-234608022|33|27.3|0.62|5.46|-|0|IRF2BP2,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3078918457031	2	507.308741	1012.60293	1.7512	0.00088841	-1.6339	-0.00082888	0.11735	5.9535E-05	507.3077698105232	28.448	0.69688	28.275	27.934	28.631	-0.17336					37	17	3	0	0	0	0.89494	1	1728	1728		37.159	0	1	310230	+		44661	15442	29913	29926	50576	50576					0.0971313808852301
QEQLKQKSA	9	Unmodified	_QEQLKQKSA_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2930908203125	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.6204	1	9498	9498		45.972	1.5951	1	1864800			44662	4726	29914	29927	50577	50577					0.045079399836367884
QEQSLRRFQLE	11	Unmodified	_QEQSLRRFQLE_					0	0	0			REV__nc|ENSG00000132305|Q16891-2|IMMT	REV__nc|ENSG00000132305|Q16891-2|IMMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.5879821777344	3	478.588035	1432.74228	-0.82422	-0.00039446	-0.85372	-0.00040858	-1.6779	-0.00080304	478.5878634148912	48.525	1.45	49.429	48.963	50.413	0.90424					125	35	5	0	0	0	0.23706	1	4693	4693		77.533	12.256	1	21529000	+		44663	18991	29915	29928	50578	50578					0.04321430915251767
QEQVKKLKVGR	11	Unmodified	_QEQVKKLKVGR_					0	0	0			REV__ENST00000561883.1_1_16:89920747-89922226:+|nuORF	REV__ENST00000561883.1_1_16:89920747-89922226:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2730712890625	3	438.273499	1311.79867	-1.4634	-0.00064136	0.1078	4.7245E-05	-1.3556	-0.00059411	438.2734550831373	106.96	1.4325	107.1	106.6	108.03	0.14105					150	35	5	0	0	0	0.73647	1	11428	11428		25.068	0.83596	1	5372900	+		44664	23534	29916	29929	50579	50579					0.15524103542543344
QEQVKKLKVGR	11	Unmodified	_QEQVKKLKVGR_					0	0	0			REV__ENST00000561883.1_1_16:89920747-89922226:+|nuORF	REV__ENST00000561883.1_1_16:89920747-89922226:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2730712890625	3	438.273499	1311.79867	0.73902	0.00032389	-1.8768	-0.00082255	-1.1378	-0.00049865	438.27258626082147	106.07	0.86208	106.16	105.83	106.7	0.099007					90	20	5	0	0	0	0.74771	1	11372	11372		22.562	0.78116	1	9065500	+		44665	23534	29916	29929	50580	50580					0.15524103542543344
QEREHNRLQS	10	Unmodified	_QEREHNRLQS_					0	0	0			REV__ENSG00000168813|ENST00000355898|ZNF507	REV__ENSG00000168813|ENST00000355898|ZNF507	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.59759521484375	3	432.884963	1295.63306	2.7169	0.0011761	-1.8871	-0.00081692	0.8298	0.00035921	432.8841243358561	104.38	3.183	104.34	103.04	106.22	-0.040512					129	76	2	0	0	0	0.37624	1	11736	11736		14.086	2.6314	1	141750	+		44666	21523	29917	29930	50581	50581					-0.0029315498422874953
QERIAKRKEQQ	11	Unmodified	_QERIAKRKEQQ_					0	0	0			REV__ENSG00000122970|ENST00000242591|IFT81	REV__ENSG00000122970|ENST00000242591|IFT81	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	471.8173828125	3	471.935546	1412.78481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.371	1	24.429	23.929	24.929	0.058167								0	0	0	0.56276	1	840	840		17.833	0.6664	1		+		44667	18522	29918	29931	50582	50582					0.09492826043447167
QERRAILTPVL	11	Unmodified	_QERRAILTPVL_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;ENST00000496144.5_1_8:100515159-100589873:+|nuORF	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.597900390625	3	432.597983	1294.77212	-0.16983	-7.3466E-05	0.49269	0.00021314	0.32286	0.00013967	432.59814834944257	107.38	0.9445	107.34	106.95	107.89	-0.034409					44	22	2	0	0	0	0.75921	1	11747	11747		17.833	0	1	14888000			44668	3805	29919	29932	50583	50583					0.13652414651210165
QERVEESDEET	11	Unmodified	_QERVEESDEET_					0	0	0			REV__ENSG00000105401|ENST00000222005|CDC37	REV__ENSG00000105401|ENST00000222005|CDC37	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.8865661621094	3	450.860037	1349.55828	-1.8834	-0.00084917	-1.1948	-0.00053869	-3.0782	-0.0013879	450.86028116249577	39.891	0.12859	39.891	39.802	39.931	0					4	2	2	0	0	0	0.17807	1	2575	2575		24.276	4.2455	1	10178	+		44669	17537	29920	29933	50584	50584					-0.10251427096773114
QERVPGWGW	9	Unmodified	_QERVPGWGW_					0	0	0		ENST00000368301.6_1_1:156052803-156060269:+|nuORF	ENST00000368301.6_1_1:156052803-156060269:+|nuORF	ENST00000368301.6_1_1:156052803-156060269:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	557.776611328125	2	557.775065	1113.53558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.724	1	77.293	76.793	77.793	0.56836								0	0	0	0.28386	1	8746	8746		37.159	2.9866	1				44670	10587	29921	29934	50585	50585					-0.01664892122425954
QESASNVSHT	10	Unmodified	_QESASNVSHT_					0	0	0		ENST00000484320.6_1_1:155979333-155988008:-|nuORF	ENST00000484320.6_1_1:155979333-155988008:-|nuORF	ENST00000484320.6_1_1:155979333-155988008:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.24072265625	2	530.238709	1058.46287	-0.033627	-1.783E-05	4.3792	0.002322	4.3455	0.0023042	530.240968765566	111.53	2.3024	111.47	110.12	112.42	-0.059937					158	81	3	0	0	0	0.73395	2	12152	12152;12166		42.864	8.4591	1	182550			44671	12533	29922	29935	50586;50587	50586					-0.06402690706499925
QESASNVSHT	10	Unmodified	_QESASNVSHT_					0	0	0		ENST00000484320.6_1_1:155979333-155988008:-|nuORF	ENST00000484320.6_1_1:155979333-155988008:-|nuORF	ENST00000484320.6_1_1:155979333-155988008:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	530.238709	1058.46287	2.6412	0.0014005	1.3676	0.00072517	4.0088	0.0021256	530.2392852349074	111.19	0.45892	111.23	110.85	111.31	0.041832	-0.11789	-0.0029457	NaN	42.864	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44756			44672	12533	29922	29935							-0.06402690706499925
QESASVSGKVE	11	Unmodified	_QESASVSGKVE_					0	0	0			REV__ENST00000443199.6_1_17:73623504-73629591:-|nuORF	REV__ENST00000443199.6_1_17:73623504-73629591:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.7801513671875	2	560.777667	1119.54078	-0.89657	-0.00050277	1.2392	0.00069494	0.34267	0.00019216	560.777889662643	31.755	0.44578	31.774	31.502	31.948	0.018362					13	9	2	0	0	0	0.732	1	1738	1738		26.063	0.48933	1	34995	+		44673	17713	29923	29936	50588	50588					-0.014206778411335108
QESTVVRG	8	Unmodified	_QESTVVRG_					0	0	0			REV__nc|ENSG00000088387|Q9BZ29-6|DOCK9	REV__nc|ENSG00000088387|Q9BZ29-6|DOCK9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2635803222656	2	438.232699	874.450845	-1.3346	-0.00058486	-1.2103	-0.00053041	-2.5449	-0.0011153	438.23186140227284	41.199	0.49681	41.833	41.675	42.172	0.6339					16	13	2	0	0	0	0.4196	1	3625	3625		40.778	0	1	773660	+		44674	16942	29924	29937	50589	50589					0.008597373409543252
QETEEKILL	9	Unmodified	_QETEEKILL_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.8038940429688	2	551.803154	1101.59175	-0.45569	-0.00025145	0.61927	0.00034172	0.16358	9.0264E-05	551.8033659569936	49.731	0.65676	50.186	49.908	50.565	0.45535					33	15	3	0	0	0	0.051853	3	4871	4851;4860;4871		107.01	11.192	1	1558600			44675	1442	29925	29938	50590;50591;50592	50592					0.04502271203705277
QETEEKILL	9	Unmodified	_QETEEKILL_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.8021850585938	2	551.803154	1101.59175	0.51323	0.0002832	-0.41176	-0.00022721	0.10147	5.5991E-05	551.8027731616427	49.588	0.60856	50.433	50.074	50.683	0.84501					31	14	3	0	0	0	0.01944	3	4857	4846;4857;4870		125.81	21.583	1	1445400			44676	1442	29925	29938	50593;50594;50595	50594					0.04502271203705277
QETGPLIRLR	10	Unmodified	_QETGPLIRLR_					0	0	0			REV__ENSG00000168538|ENST00000334690|TRAPPC11	REV__ENSG00000168538|ENST00000334690|TRAPPC11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	591.85400390625	2	591.851304	1181.68806	-0.4624	-0.00027367	3.1308	0.0018529	2.6684	0.0015793	591.8531037524784	60.656	0.65604	61.209	60.855	61.511	0.55323					47	19	3	0	0	0	0.3872	1	6480	6480		65.157	13.629	1	1852500	+		44677	21498	29926	29939	50596	50596					0.10447883554297732
QETIVPVTYQ	10	Unmodified	_QETIVPVTYQ_					0	0	0		ENSG00000062096|ENST00000381127|ARSF	ENSG00000062096|ENST00000381127|ARSF	ENSG00000062096|ENST00000381127|ARSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3070068359375	2	589.308603	1176.60265	-2.0876	-0.0012303	0.11446	6.745E-05	-1.9732	-0.0011628	589.3084929856454	43.89	0.57647	43.888	43.67	44.246	-0.002449					27	14	3	0	0	0	0.76096	1	3408	3408		41.427	1.3684	1	181370			44678	1082	29927	29940	50597	50597					0.0214167357801216
QETSFTKEAY	10	Unmodified	_QETSFTKEAY_					0	0	0		ENST00000533567.5_1_13:45912892-45914385:-|nuORF;nc|ENSG00000133112|P13693-2|TPT1;ENSG00000133112|ENST00000530705|TPT1	ENST00000533567.5_1_13:45912892-45914385:-|nuORF	ENST00000533567.5_1_13:45912892-45914385:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	602.2792358398438	2	602.280043	1202.54553	-0.185	-0.00011142	-2.3681	-0.0014262	-2.5531	-0.0015377	602.2784577384543	40.43	0.64768	40.399	40.044	40.692	-0.030991					42	17	3	0	0	0	0.021016	5	2893	2868;2876;2884;2893;2912		120.31	59.334	1	627000			44679	3858	29928	29941	50598;50599;50600;50601;50602	50601					-0.04763793698361951
QETSFTKEAY	10	Unmodified	_QETSFTKEAY_					0	0	0		ENST00000533567.5_1_13:45912892-45914385:-|nuORF;nc|ENSG00000133112|P13693-2|TPT1;ENSG00000133112|ENST00000530705|TPT1	ENST00000533567.5_1_13:45912892-45914385:-|nuORF	ENST00000533567.5_1_13:45912892-45914385:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.279052734375	2	602.280043	1202.54553	-0.83376	-0.00050216	-1.3594	-0.00081872	-2.1931	-0.0013209	602.2791335320527	40.386	0.68192	40.343	40.008	40.69	-0.043694					43	16	4	0	0	0	0.015963	3	2964	2956;2964;2988		126.24	31.819	1	723560			44680	3858	29928	29941	50603;50604;50605	50604					-0.04763793698361951
QETSFTKEAY	10	Unmodified	_QETSFTKEAY_					0	0	0		ENST00000533567.5_1_13:45912892-45914385:-|nuORF;nc|ENSG00000133112|P13693-2|TPT1;ENSG00000133112|ENST00000530705|TPT1	ENST00000533567.5_1_13:45912892-45914385:-|nuORF	ENST00000533567.5_1_13:45912892-45914385:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	602.27978515625	2	602.280043	1202.54553	-2.3357	-0.0014067	0.25826	0.00015555	-2.0774	-0.0012512	602.2799940981067	40.289	0.70148	40.298	39.986	40.687	0.0092773					46	16	4	0	0	0	0.00059979	3	2889	2879;2889;2901		140.11	65.857	1	842130			44681	3858	29928	29941	50606;50607;50608	50607					-0.04763793698361951
QEVERILYF	9	Unmodified	_QEVERILYF_					0	0	0		nc|ENSG00000165097|Q8NB78-2|KDM1B;ENSG00000165097|ENST00000650836|KDM1B	nc|ENSG00000165097|Q8NB78-2|KDM1B	nc|ENSG00000165097|Q8NB78-2|KDM1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.8192138671875	2	598.819138	1195.62372	-0.25861	-0.00015486	-0.10687	-6.3994E-05	-0.36548	-0.00021886	598.8191427631053	71.334	0.53845	71.295	70.984	71.522	-0.039001					36	25	2	0	0	0	0.69624	1	6921	6921		40.778	9.2484	1	137480			44682	6044	29929	29942	50609	50609					0.033736836775233314
QEVHVPVPM	9	Unmodified	_QEVHVPVPM_					0	0	0			REV__ENSG00000160218|ENST00000291574|TRAPPC10	REV__ENSG00000160218|ENST00000291574|TRAPPC10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2508544921875	2	518.268227	1034.5219	1.0818	0.00056064	1.5419	0.00079914	2.6237	0.0013598	518.2689409304893	33.916	0.53596	34.221	33.994	34.53	0.30494					18	12	2	0	0	0	0.20789	1	2469	2469		30.504	0	1	312330	+		44683	20704	29930	29943	50610	50610					0.006021140541179193
QEVKSQSKR	9	Unmodified	_QEVKSQSKR_					0	0	0			REV__ENST00000431635.6_1_1:43637952-43638000:-|nuORF	REV__ENST00000431635.6_1_1:43637952-43638000:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3062133789062	2	545.304187	1088.59382	-0.14303	-7.7996E-05	3.4446	0.0018783	3.3015	0.0018003	545.3060632440186	24.601	1.8516	24.273	23.461	25.312	-0.32825					98	41	5	0	0	0	0.19437	1	1229	1229		75.043	5.4157	1	6005700	+		44684	26623	29931	29944	50611	50611					0.053067447322064254
QEVTPPAP	8	Unmodified	_QEVTPPAP_					0	0	0			REV__ENSG00000119559|ENST00000585675|C19orf25	REV__ENSG00000119559|ENST00000585675|C19orf25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.71807861328125	2	419.718893	837.423233	1.6798	0.00070504	-2.4337	-0.0010215	-0.75393	-0.00031644	419.71778611541424	43.542	1.0507	43.54	43.239	44.289	-0.002449					50	25	3	0	0	0	0.9295	1	3371	3371		55.504	2.1528	1	281930	+		44685	18359	29932	29945	50612	50612					-0.0019816591927792615
QEVTQDLHY	9	Unmodified	_QEVTQDLHY_					0	0	0		ENSG00000168385|ENST00000391971|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000168385|Q15019-2|SEPTIN2;ENST00000481500.1_1_2:242277175-242285749:+|nuORF	ENSG00000168385|ENST00000391971|SEPTIN2	ENSG00000168385|ENST00000391971|SEPTIN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	566.767333984375	2	566.767103	1131.51965	-0.68936	-0.0003907	0.32318	0.00018317	-0.36618	-0.00020754	566.7670255612381	46.287	0.5362	46.258	45.973	46.509	-0.028778					26	12	3	0	0	0	0.28163	1	3805	3805		66.429	18.772	1	249420			44686	6396	29933	29946	50613	50613					-0.0408464315000856
QEVTQDLHY	9	Unmodified	_QEVTQDLHY_					0	0	0		ENSG00000168385|ENST00000391971|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000168385|Q15019-2|SEPTIN2;ENST00000481500.1_1_2:242277175-242285749:+|nuORF	ENSG00000168385|ENST00000391971|SEPTIN2	ENSG00000168385|ENST00000391971|SEPTIN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	566.766357421875	2	566.767103	1131.51965	0.49119	0.00027839	-0.92162	-0.00052235	-0.43043	-0.00024396	566.7663433613731	46.277	0.52493	46.273	46.069	46.593	-0.0041618					28	12	3	0	0	0	0.28163	2	3726	3726;3738		66.429	28.618	1	184980			44687	6396	29933	29946	50614;50615	50614					-0.0408464315000856
QEVTQDLHY	9	Unmodified	_QEVTQDLHY_					0	0	0		ENSG00000168385|ENST00000391971|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000168385|Q15019-2|SEPTIN2;ENST00000481500.1_1_2:242277175-242285749:+|nuORF	ENSG00000168385|ENST00000391971|SEPTIN2	ENSG00000168385|ENST00000391971|SEPTIN2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	566.767103	1131.51965	-0.95062	-0.00053878	0.6962	0.00039458	-0.25442	-0.0001442	566.7671988907111	46.387	0.61588	46.373	46.103	46.719	-0.013821	0.071797	0.00064043	NaN	66.429	29	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206300			44688	6396	29933	29946							-0.0408464315000856
QEWIKNIREV	10	Unmodified	_QEWIKNIREV_					0	0	0		ENSG00000160145|ENST00000682506|KALRN;nc|ENSG00000160145|O60229|KALRN;nc|ENSG00000160145|O60229-2|KALRN	ENSG00000160145|ENST00000682506|KALRN	ENSG00000160145|ENST00000682506|KALRN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26312255859375	3	438.910338	1313.70918	0.070427	3.0911E-05	-1.0398	-0.00045638	-0.96937	-0.00042547	438.9103875114935	38.886	0.1784	38.858	38.765	38.943	-0.027843					5	3	2	0	0	0	0.37624	1	2660	2660		22.562	10.129	1	16655			44689	5556	29934	29947	50616	50616					0.06487848863162071
QEWRRQLPWER	11	Unmodified	_QEWRRQLPWER_					0	0	0			REV__ENST00000450207.5_2_22:50315257-50315350:+|nuORF	REV__ENST00000450207.5_2_22:50315257-50315350:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.830078125	3	528.611174	1582.81169	0.16546	8.7465E-05	3.7067	0.0019594	3.8722	0.0020469	528.9476448628773	33.148	0.21126	33.093	32.969	33.18	-0.054337					8	5	2	0	0	0	0.18258	1	1990	1990		8.7993	0	1	19673	+		44690	26865	29935	29948	50617	50617					0.04359934654667086
QEWVHGGM	8	Unmodified	_QEWVHGGM_					0	0	0		ENST00000480809.5_1_3:185925300-186038248:-|nuORF;nc|ENSG00000058866|P49619-3|DGKG;nc|ENSG00000058866|P49619-2|DGKG;ENSG00000058866|ENST00000265022|DGKG;ENST00000482566.1_1_3:185997579-185998530:-|nuORF	ENST00000480809.5_1_3:185925300-186038248:-|nuORF	ENST00000480809.5_1_3:185925300-186038248:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2771301269531	2	472.20817	942.401786	0.20296	9.584E-05	-0.38551	-0.00018204	-0.18255	-8.6201E-05	472.20693652448585	34.345	0.15023	34.299	34.225	34.375	-0.045815					6	5	2	0	0	0	0.87922	1	1731	1731		31.955	6.5047	1	38221			44691	1049	29936	29949	50618	50618					-0.0717187421963672
QFAEAKKAM	9	Unmodified	_QFAEAKKAM_					0	0	0			REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2808837890625	2	512.268227	1022.5219	1.0387	0.00053209	2.1819	0.0011177	3.2206	0.0016498	512.2688851099183	84.797	0.47815	84.725	84.412	84.89	-0.07196					12	10	2	0	0	0	0.20789	1	8642	8642		47.657	19.775	1	31155	+		44692	27574	29937	29950	50619	50619					0.011541140541112327
QFAEAKKAM	9	Unmodified	_QFAEAKKAM_					0	0	0			REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	512.268227	1022.5219	-0.052147	-2.6713E-05	5.9055	0.0030252	5.8533	0.0029985	512.7735503341049	84.893	0.43611	84.961	84.593	85.029	0.067177	0.14537	0.00012583	NaN	47.657	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43967	+		44693	27574	29937	29950							0.011541140541112327
QFAEAKKAM	9	Unmodified	_QFAEAKKAM_					0	0	0			REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	512.268227	1022.5219	0.25358	0.0001299	4.1332	0.0021173	4.3867	0.0022472	512.2695883443203	84.621	0.47894	84.681	84.414	84.893	0.059258	-0.13461	-0.00169	NaN	47.657	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33268	+		44694	27574	29937	29950							0.011541140541112327
QFAEAKKAM	9	Unmodified	_QFAEAKKAM_					0	0	0			REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	512.268227	1022.5219	-0.14453	-7.4036E-05	6.7832	0.0034748	6.6387	0.0034008	512.2716706884705	84.388	0.4339	84.823	84.588	85.022	0.43538	0.0079068	0.0010251	NaN	47.657	16	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118570	+		44695	27574	29937	29950							0.011541140541112327
QFAEAKKAM	9	Unmodified	_QFAEAKKAM_					0	0	0			REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	REV__ENST00000487376.5_1_6:30695895-30698542:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	512.268227	1022.5219	0.29185	0.00014951	6.5938	0.0033778	6.8856	0.0035273	512.2711642058337	84.439	0.40143	84.887	84.713	85.115	0.44736	0.071498	0.00083103	NaN	47.657	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102090	+		44696	27574	29937	29950							0.011541140541112327
QFCFDGIH	8	Unmodified	_QFCFDGIH_					0	0	0			REV__nc|ENSG00000213020|Q8N823-2|ZNF611;REV__nc|ENSG00000198538|P17035-2|ZNF28	REV__nc|ENSG00000213020|Q8N823-2|ZNF611	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.71044921875	2	483.710545	965.406537	0.8658	0.0004188	-1.1105	-0.00053715	-0.24468	-0.00011835	483.7099777703553	88.514	1.0974	88.963	88.635	89.732	0.44893					54	26	4	0	0	0	0.86791	1	10425	10425		28.254	2.8041	1	1360900	+		44697	23604;23336	29938	29951	50620	50620					-0.07754990076887225
QFCFDGNH	8	Unmodified	_QFCFDGNH_					0	0	0			REV__ENSG00000196417|ENST00000396408|ZNF765	REV__ENSG00000196417|ENST00000396408|ZNF765	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.236083984375	2	484.189977	966.365401	0.24953	0.00012082	3.7823	0.0018314	4.0319	0.0019522	484.19185059251	86.228	0.20012	86.671	86.531	86.731	0.44331					7	4	2	0	0	0	0.4196	1	10081	10081		55.504	45.319	1	76543	+		44698	23126	29939	29952	50621	50621					-0.11912751116358322
QFCFDGNH	8	Unmodified	_QFCFDGNH_					0	0	0			REV__ENSG00000196417|ENST00000396408|ZNF765	REV__ENSG00000196417|ENST00000396408|ZNF765	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23614501953125	2	484.189977	966.365401	-0.90831	-0.00043979	-4.0222	-0.0019475	-4.9305	-0.0023873	484.18765035005947	86.26	0.28119	86.715	86.534	86.815	0.45429					9	6	2	0	0	0	0.4196	1	10126	10126		55.504	21.989	1	77343	+		44699	23126	29939	29952	50622	50622					-0.11912751116358322
QFCHKPSL	8	Unmodified	_QFCHKPSL_					0	0	0			REV__ENST00000475185.5_1_18:20877516-20877840:-|nuORF	REV__ENST00000475185.5_1_18:20877516-20877840:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.2421569824219	2	480.242012	958.469472	0.093776	4.5035E-05	2.2456	0.0010784	2.3394	0.0011235	480.2429209398555	32.615	0.74674	32.626	32.298	33.044	0.010899					34	18	3	0	0	0	0.89043	1	1834	1834		35.618	1.4457	1	131240	+		44700	27315	29940	29953	50623	50623					-0.011424242888324443
QFDVATHL	8	Unmodified	_QFDVATHL_					0	0	0		ENST00000488453.1_1_1:38483328-38489297:+|nuORF;ENSG00000183520|ENST00000373014|UTP11	ENST00000488453.1_1_1:38483328-38489297:+|nuORF	ENST00000488453.1_1_1:38483328-38489297:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7383728027344	2	465.737617	929.460681	-0.20328	-9.4673E-05	0.11912	5.5479E-05	-0.084156	-3.9194E-05	465.7375684973167	53.392	0.78505	53.806	53.499	54.284	0.4139					43	18	3	0	0	0	0.3646	4	5377	5377;5387;5399;5412		88.643	33.139	1	1702600			44701	7537	29941	29954	50624;50625;50626;50627	50624					-0.006870746536719707
QFDVATHL	8	Unmodified	_QFDVATHL_					0	0	0		ENST00000488453.1_1_1:38483328-38489297:+|nuORF;ENSG00000183520|ENST00000373014|UTP11	ENST00000488453.1_1_1:38483328-38489297:+|nuORF	ENST00000488453.1_1_1:38483328-38489297:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7383117675781	2	465.737617	929.460681	-0.47363	-0.00022059	0.46197	0.00021516	-0.011653	-5.4274E-06	465.73771861225316	53.143	0.66206	53.757	53.449	54.111	0.61436					39	15	3	0	0	0	0.3646	4	5361	5361;5371;5383;5397		97.473	39.661	1	1989700			44702	7537	29941	29954	50628;50629;50630;50631	50628					-0.006870746536719707
QFEEYFAW	8	Unmodified	_QFEEYFAW_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.747314453125	2	560.242732	1118.47091	-0.51849	-0.00029048	3.6227	0.0020296	3.1042	0.0017391	560.2447202398796	26.751	0.61838	26.792	26.47	27.088	0.040834					32	18	2	0	0	0	0.90465	1	1173	1173		40.573	1.7665	1	72536	+		44703	22907	29942	29955	50632	50632					-0.08358511719097805
QFIELLSKL	9	Unmodified	_QFIELLSKL_					0	0	0			REV__ENSG00000145839|ENST00000274520|IL9	REV__ENSG00000145839|ENST00000274520|IL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.827880859375	2	545.828975	1089.6434	-0.35864	-0.00019575	-0.18098	-9.8785E-05	-0.53962	-0.00029454	545.8287539646547	60.31	1.0281	60.296	59.859	60.888	-0.013729					68	27	4	0	0	0	0.48102	1	5610	5610		52.937	0	1	1311700	+		44704	19971	29943	29956	50633	50633					0.10216059688286805
QFIERRFKKEL	11	Unmodified	_QFIERRFKKEL_					0	0	0			REV__nc|ENSG00000138709|Q659C4-2|LARP1B	REV__nc|ENSG00000138709|Q659C4-2|LARP1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.623046875	3	498.624421	1492.85143	0.21444	0.00010693	-2.8229	-0.0014076	-2.6084	-0.0013006	498.62281482057665	22.043	1.7711	21.6	20.78	22.551	-0.44324					90	40	3	0	0	0	0.74405	1	889	889		23.378	6.2112	1	200640	+		44705	19498	29944	29957	50634	50634					0.12472061605376439
QFIGMMSRLF	10	Unmodified	_QFIGMMSRLF_					0	0	0			REV__ENST00000484527.5_1_7:105913079-105915456:-|nuORF	REV__ENST00000484527.5_1_7:105913079-105915456:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.3123779296875	2	615.312112	1228.60967	-0.36025	-0.00022167	3.2581	0.0020048	2.8979	0.0017831	615.3140495808801	80.594	1.1244	80.656	80.19	81.315	0.062225					71	31	4	0	0	0	0.42393	1	7919	7919		62.107	9.1707	1	822420	+		44706	27512	29945	29958	50635	50635					0.0045099165322426416
QFKKKKSP	8	Unmodified	_QFKKKKSP_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.809326171875	2	495.808377	989.6022	-0.65934	-0.00032691	0.66803	0.00033121	0.008687	4.3071E-06	495.80857590328196	38.133	0.74035	38.472	38.154	38.894	0.33957					39	18	3	0	0	0	0.79403	1	3123	3123		63.306	0	1	987110	+		44707	19496	29946	29959	50636	50636					0.10698343439469227
QFKQSKTQ	8	Unmodified	_QFKQSKTQ_					0	0	0		nc|ENSG00000172955|P28332|ADH6;ENSG00000172955|ENST00000394899|ADH6	nc|ENSG00000172955|P28332|ADH6	nc|ENSG00000172955|P28332|ADH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7701110839844	2	497.769448	993.524344	2.1837	0.001087	0.94386	0.00046982	3.1275	0.0015568	497.7697728239385	26.206	1.1075	25.866	25.53	26.637	-0.34035					61	24	4	0	0	0	0.53378	1	1446	1446		74.255	0	1	2042700			44708	6809	29947	29960	50637	50637					0.027322857834292336
QFLAIENKIAM	11	Unmodified	_QFLAIENKIAM_					0	0	0		chr2:99354073-99360236|38|35.08|0.8|5.45|+|2|TE_info:L1MD2,L1MD2_dup950,L1,LINE,donor,-,99353472,99354073|None,EIF5B|5	chr2:99354073-99360236|38|35.08|0.8|5.45|+|2|TE_info:L1MD2,L1MD2_dup950,L1,LINE,donor,-,99353472,99354073|None,EIF5B|5	chr2:99354073-99360236|38|35.08|0.8|5.45|+|2|TE_info:L1MD2,L1MD2_dup950,L1,LINE,donor,-,99353472,99354073|None,EIF5B|5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3599243164062	2	639.349748	1276.68494	3.0904	0.0019759	3.3759	0.0021584	6.4664	0.0041343	640.3567163045125	99.066	2.3862	99.429	98.727	101.11	0.36292					195	59	5	0	0	0	0.67778	1	12088	12088		35.152	2.3396	1	1604000			44709	355	29948	29961	50638	50638					0.057668723852884796
QFLGRVGGAG	10	Unmodified	_QFLGRVGGAG_					0	0	0		ENST00000222374.2_1_19:44126724-44127456:-|nuORF	ENST00000222374.2_1_19:44126724-44127456:-|nuORF	ENST00000222374.2_1_19:44126724-44127456:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.2708435058594	2	481.264333	960.514114	0.17384	8.3664E-05	3.13	0.0015064	3.3039	0.00159	481.2657430262698	31.517	0.57239	31.535	31.242	31.815	0.018362					20	12	2	0	0	0	0.86589	1	1700	1700		29.15	2.3535	1	41583			44710	9176	29949	29962	50639	50639					0.03227722848862413
QFLHSSCF	8	Unmodified	_QFLHSSCF_					0	0	0			REV__ENST00000349792.9_1_1:151221216-151221447:+|nuORF	REV__ENST00000349792.9_1_1:151221216-151221447:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7178649902344	2	484.71837	967.422187	1.6171	0.00078385	-1.8628	-0.00090295	-0.2457	-0.00011909	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.87922	1	11546	11546		31.955	1.4512	1	7541600	+		44711	25335	29950	29963	50640	50640					-0.06282703559827496
QFLLIFIQKRY	11	Unmodified	_QFLLIFIQKRY_					0	0	0			REV__nc|ENSG00000124207|P55060-4|CSE1L	REV__nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.62652587890625	3	490.294012	1467.86021	0.071923	3.5263E-05	0.053618	2.6289E-05	0.12554	6.1552E-05	490.62832702757953	16.078	0.17247	16.137	16.06	16.232	0.059269					11	7	2	0	0	0	0.74022	1	111	111		24.232	6.3987	1	103350	+		44712	18569	29951	29964	50641	50641					0.14499035241829006
QFLLIFIQKRY	11	Unmodified	_QFLLIFIQKRY_					0	0	0			REV__nc|ENSG00000124207|P55060-4|CSE1L	REV__nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	490.294012	1467.86021	-0.78989	-0.00038728	0.98259	0.00048176	0.19269	9.4476E-05	490.29453189177326	16.017	0.17571	16.065	15.987	16.163	0.047804	-0.035284	0.0010902	NaN	24.232	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62914	+		44713	18569	29951	29964							0.14499035241829006
QFLLIFIQKRY	11	Unmodified	_QFLLIFIQKRY_					0	0	0			REV__nc|ENSG00000124207|P55060-4|CSE1L	REV__nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	490.294012	1467.86021	0.071923	3.5263E-05	0.053618	2.6289E-05	0.12554	6.1552E-05	490.62832702757953	16.078	0.17247	16.137	16.06	16.232	0.059269	0.036696	-0.00027621	NaN	24.232	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103350	+		44714	18569	29951	29964							0.14499035241829006
QFLLIFIQKRY	11	Unmodified	_QFLLIFIQKRY_					0	0	0			REV__nc|ENSG00000124207|P55060-4|CSE1L	REV__nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	490.294012	1467.86021	0.73842	0.00036204	-0.2409	-0.00011811	0.49752	0.00024393	490.29400050151884	16.123	0.26686	16.099	15.958	16.225	-0.024035	-0.0014119	-0.0007094	NaN	24.232	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62052	+		44715	18569	29951	29964							0.14499035241829006
QFLSALGRKIN	11	Unmodified	_QFLSALGRKIN_					0	0	0			REV__ENSG00000138823|ENST00000265517|MTTP	REV__ENSG00000138823|ENST00000265517|MTTP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.87109375	2	623.866954	1245.71936	1.336	0.00083349	4.1968	0.0026182	5.5328	0.0034517	623.8694839910095	104.33	2.0015	104.5	104.05	106.06	0.17096					147	50	4	0	0	0	0.70737	1	11085	11085		30.318	2.4355	1	2830400	+		44716	19510	29952	29965	50642	50642					0.10632456588427885
QFNLIHPIII	10	Unmodified	_QFNLIHPIII_					0	0	0		ENSG00000122735|ENST00000242317|DNAI1	ENSG00000122735|ENST00000242317|DNAI1	ENSG00000122735|ENST00000242317|DNAI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2467346191406	3	403.24477	1206.71248	2.718	0.001096	2.5029	0.0010093	5.2209	0.0021053	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.86047	1	11559	11559		23.523	0.94304	1	15597000			44717	3244	29953	29966	50643	50643					0.11739143707859512
QFPLLGTGKQ	10	Unmodified	_QFPLLGTGKQ_					0	0	0			REV__ENSG00000187959|ENST00000344935|CPSF4L	REV__ENSG00000187959|ENST00000344935|CPSF4L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.80712890625	2	544.808574	1087.60259	0.47778	0.0002603	-3.8094	-0.0020754	-3.3316	-0.0018151	544.8063091278402	25.035	0.58678	24.994	24.644	25.231	-0.04117					29	13	3	0	0	0	0.57924	1	1028	1028		51.193	5.2204	1	69297	+		44718	22965	29954	29967	50644	50644					0.062297183686723656
QFPQQAPL	8	Unmodified	_QFPQQAPL_					0	0	0			REV__ENSG00000099721|ENST00000651267|AMELY	REV__ENSG00000099721|ENST00000651267|AMELY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7480163574219	2	464.747985	927.481417	-0.28675	-0.00013327	0.63286	0.00029412	0.34611	0.00016086	464.7479895288426	27.515	0.71511	27.477	27.165	27.88	-0.038523					32	16	4	0	0	0	0.884	1	1325	1325		33.516	0	1	76712	+		44719	17100	29955	29968	50645	50645					0.01477515725991907
QFPVCMLDIFK	11	Unmodified	_QFPVCMLDIFK_					0	0	0		ENST00000379162.8_1_X:24549786-24549834:+|nuORF	ENST00000379162.8_1_X:24549786-24549834:+|nuORF	ENST00000379162.8_1_X:24549786-24549834:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.3066711425781	3	447.562893	1339.66685	-0.073926	-3.3087E-05	3.4628	0.0015498	3.3888	0.0015167	447.5654719951178	23.723	0.60305	23.341	22.973	23.576	-0.38178					21	13	4	0	0	0	0.17302	1	1031	1031		47.228	23.85	1	75280			44720	10883	29956	29969	50646	50646					0.01060414138919441
QFQHHVNG	8	Unmodified	_QFQHHVNG_					0	0	0			REV__nc|ENSG00000057149|P29508-2|SERPINB3	REV__nc|ENSG00000057149|P29508-2|SERPINB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7275695800781	2	483.730658	965.446762	-0.43765	-0.00021171	-3.5248	-0.0017051	-3.9625	-0.0019168	483.7287765633433	73.809	0.56664	74.196	73.93	74.496	0.3878					32	14	3	0	0	0	0.86288	1	8292	8292		26.796	0.10319	1	556160	+		44721	16424	29957	29970	50647	50647					-0.03734307362094569
QFRGLRRV	8	Unmodified	_QFRGLRRV_					0	0	0		ENSG00000178971|ENST00000651323|CTC1;nc|ENSG00000178971|Q2NKJ3-2|CTC1	ENSG00000178971|ENST00000651323|CTC1	ENSG00000178971|ENST00000651323|CTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3143920898438	2	516.314692	1030.61483	-1.5619	-0.00080641	0.27971	0.00014442	-1.2821	-0.00066199	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86288	1	12771	12771		26.796	3.7536	1	4038100			44722	7237	29958	29971	50648	50648					0.10074799622361752
QFTLMLSSM	9	2 Oxidation (M)	_QFTLM(Oxidation (M))LSSM(Oxidation (M))_		QFTLM(1)LSSM(1)		QFTLM(91)LSSM(91)	0	0	2		ENST00000547237.1_1_14:25900667-25900754:-|nuORF	ENST00000547237.1_1_14:25900667-25900754:-|nuORF	ENST00000547237.1_1_14:25900667-25900754:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.25390625	2	545.251385	1088.48822	0.081856	4.4632E-05	4.0705	0.0022194	4.1523	0.0022641	545.2535786926758	68.87	1.1414	68.833	68.194	69.335	-0.036957					95	44	3	0	0	0	0.10807	1	6665	6665		90.777	8.5361	1	834940			44723	13601	29959	29972	50649	50649		199;200			-0.052486754999563345
QFVHPKKTY	9	Unmodified	_QFVHPKKTY_					0	0	0			REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3193969726562	2	574.316566	1146.61858	1.0954	0.0006291	4.0038	0.0022994	5.0992	0.0029285	574.3187099892803	94.307	4.5457	94.353	93.159	97.704	0.046173					261	107	4	0	0	0	0.76255	2	9885	9885;9953		35.618	7.5368	1	1593500	+		44724	18653	29960	29973	50650;50651	50650					0.051134246055880794
QFYGCTIIY	9	Unmodified	_QFYGCTIIY_					0	0	0		ENST00000485364.1_1_20:31136574-31172692:-|nuORF	ENST00000485364.1_1_20:31136574-31172692:-|nuORF	ENST00000485364.1_1_20:31136574-31172692:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.264892578125	2	554.26261	1106.51067	-0.11656	-6.4607E-05	-0.34233	-0.00018974	-0.45889	-0.00025435	554.2620387935995	55.119	1.2151	55.687	54.901	56.116	0.56836					63	28	3	0	0	0	0.69914	2	5678	5678;5692		40.573	10.069	1	791590			44725	12554	29961	29974	50652;50653	50652					-0.038327080399994884
QGAGLPKAPR	10	Unmodified	_QGAGLPKAPR_					0	0	0			REV__ENST00000358664.8_1_14:65543168-65544651:-|nuORF	REV__ENST00000358664.8_1_14:65543168-65544651:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7926330566406	2	497.793258	993.571963	0.11493	5.7209E-05	-0.38275	-0.00019053	-0.26783	-0.00013332	497.79284591894856	17.564	0.58294	16.953	16.613	17.196	-0.6107					25	13	3	0	0	0	0.77314	1	260	260		40.778	11.629	1	179040	+		44726	25440	29962	29975	50654	50654					0.07491984774276261
QGAHAIIGL	9	Unmodified	_QGAHAIIGL_					0	0	0			REV__ENSG00000121454|ENST00000263726|LHX4	REV__ENSG00000121454|ENST00000263726|LHX4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.2551574707031	2	440.255977	878.497401	-1.5839	-0.00069732	0.16691	7.3485E-05	-1.417	-0.00062383	440.25587976101764	60.405	0.60947	60.405	60.075	60.685	0					41	23	2	0	0	0	0.7932	1	5314	5314		25.45	2.4077	1	114510	+		44727	18456	29963	29976	50655	50655					0.05329221962904285
QGAKGVARPG	10	Unmodified	_QGAKGVARPG_					0	0	0			REV__ENSG00000197483|ENST00000598519|ZNF628	REV__ENSG00000197483|ENST00000598519|ZNF628	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7694396972656	2	470.769783	939.525013	-0.63239	-0.00029771	-1.0756	-0.00050635	-1.708	-0.00080406	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.6116	1	4792	4792		49.442	6.9671	1	1468500	+		44728	23237	29964	29977	50656	50656					0.052831252231385406
QGANFYCFWA	10	Unmodified	_QGANFYCFWA_					0	0	0			REV__ENST00000534425.5_1_11:67431830-67435009:-|nuORF	REV__ENST00000534425.5_1_11:67431830-67435009:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	603.7528686523438	2	603.755484	1205.49641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.902	1	18.879	18.379	19.379	-0.023342								0	0	0	0.45132	1	379	379		21.96	1.013	1		+		44729	19026	29965	29978	50657	50657					-0.09811360468302155
QGCFYTKL	8	Unmodified	_QGCFYTKL_					0	0	0		ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.28515625	2	480.236396	958.458238	0.96008	0.00046106	2.2153	0.0010639	3.1754	0.0015249	480.2371241941811	24.956	0.36233	24.627	24.476	24.838	-0.32825					9	7	2	0	0	0	0.4196	1	1250	1250		53.351	7.3792	1	21976			44730	1155	29966	29979	50658	50658					-0.022652463830013403
QGCLGAGAPDT	11	Unmodified	_QGCLGAGAPDT_					0	0	0			REV__nc|ENSG00000198276|Q9NWZ5-2|UCKL1	REV__nc|ENSG00000198276|Q9NWZ5-2|UCKL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.79327392578125	2	495.221474	988.428395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.866	1	72.866	72.366	73.366	0								0	0	0	0.56276	1	6546	6546		29.17	2.4771	1		+		44731	30145	29967	29980	50659	50659					-0.06628230118985812
QGDERQQSH	9	Unmodified	_QGDERQQSH_					0	0	0		ENST00000311331.11_1_17:16527390-16527531:-|nuORF	ENST00000311331.11_1_17:16527390-16527531:-|nuORF	ENST00000311331.11_1_17:16527390-16527531:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	542.7377319335938	2	542.741951	1083.46935	0.0027969	1.518E-06	-3.5	-0.0018996	-3.4972	-0.0018981	542.7399553349529	28.759	0.64643	28.828	28.635	29.282	0.068678					55	32	2	0	0	0	0.67345	1	1208	1208		42.396	5.9494	1	101460			44732	9926	29968	29981	50660	50660					-0.0690475275512199
QGDKVKRGT	9	Unmodified	_QGDKVKRGT_					0	0	0			REV__ENSG00000041802|ENST00000265245|LSG1	REV__ENSG00000041802|ENST00000265245|LSG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7801208496094	2	494.780348	987.546142	-0.85772	-0.00042438	0.93735	0.00046378	0.07963	3.9399E-05	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.73802	1	8829	8829		37.812	2.1932	1	737700	+		44733	16322	29969	29982	50661	50661					0.05187090532012917
QGEGDPHEL	9	Unmodified	_QGEGDPHEL_					0	0	0			REV__nc|ENSG00000172426|Q9H1X1-2|RSPH9	REV__nc|ENSG00000172426|Q9H1X1-2|RSPH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2171936035156	2	491.217246	980.419939	-1.2074	-0.00059309	1.2337	0.00060601	0.026311	1.2925E-05	491.217698034564	29.055	1.2056	29.026	28.57	29.775	-0.029207					62	27	3	0	0	0	0.67345	1	1828	1828		42.396	8.2236	1	361790	+		44734	30030	29970	29983	50662	50662					-0.07105460763943938
QGEGRGAPDL	10	Unmodified	_QGEGRGAPDL_					0	0	0			REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	REV__ENST00000464528.5_1_17:1630890-1639119:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.24749755859375	2	500.246338	998.478122	-0.20374	-0.00010192	0.24734	0.00012373	0.043604	2.1813E-05	500.24629090047296	28.667	0.77091	28.627	28.394	29.165	-0.039907					34	25	2	0	0	0	0.85981	1	1473	1473		35.152	0	1	56319	+		44735	21422	29971	29984	50663	50663					-0.0211777911866875
QGEPRTKRQAI	11	Unmodified	_QGEPRTKRQAI_					0	0	0		ENSG00000185532|ENST00000373980|PRKG1	ENSG00000185532|ENST00000373980|PRKG1	ENSG00000185532|ENST00000373980|PRKG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3633422851562	2	642.362567	1282.71058	2.0883	0.0013414	-1.9826	-0.0012736	0.10569	6.7891E-05	642.3608064218109	112.21	4.9435	112.24	112.06	117	0.030602					291	230	2	0	0	0	0.70737	1	13550	13550		30.318	0	1	12073000			44736	7722	29972	29985	50664	50664					0.08053482951959268
QGFHPSAP	8	Unmodified	_QGFHPSAP_					0	0	0		nc|ENSG00000118900|Q9NPG3-2|UBN1;ENSG00000118900|ENST00000262376|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.70330810546875	2	420.703577	839.392602	-0.84556	-0.00035573	1.2285	0.00051682	0.3829	0.00016109	420.7040371594046	36.096	0.77119	36.04	35.742	36.513	-0.055904					28	16	2	0	0	0	0.88915	1	2389	2389		35.201	1.6851	1	183950			44737	3048	29973	29986	50665	50665					-0.03351899513677381
QGFHPSAP	8	Unmodified	_QGFHPSAP_					0	0	0		nc|ENSG00000118900|Q9NPG3-2|UBN1;ENSG00000118900|ENST00000262376|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	nc|ENSG00000118900|Q9NPG3-2|UBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.7042541503906	2	420.703577	839.392602	0.14834	6.2408E-05	0.63018	0.00026512	0.77852	0.00032753	420.7036161426667	35.865	0.60511	35.968	35.648	36.253	0.10306					33	19	2	0	0	0	0.884	1	1927	1927		33.516	0	1	88341			44738	3048	29973	29986	50666	50666					-0.03351899513677381
QGFRIQNQ	8	Unmodified	_QGFRIQNQ_					0	0	0		L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|179|3|sense	L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|179|3|sense	L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|179|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.7538146972656	2	495.759415	989.504277	0.098162	4.8665E-05	0.074345	3.6857E-05	0.17251	8.5522E-05	495.75905236109116	34.81	2.006	35.02	34.646	36.652	0.21002					82	50	2	0	0	0	0.84634	2	2594	2582;2594		60.294	0	1	3894900			44739	14663	29974	29987	50667;50668	50668					0.009105348434673033
QGGCLPRL	8	Unmodified	_QGGCLPRL_					0	0	0		ENST00000490381.1_1_20:36963896-36965583:+|nuORF	ENST00000490381.1_1_20:36963896-36965583:+|nuORF	ENST00000490381.1_1_20:36963896-36965583:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2280578613281	2	422.228905	842.443257	-1.8115	-0.00076488	-0.36746	-0.00015515	-2.179	-0.00092003	422.2286507629438	57.274	2.0296	57.354	56.645	58.675	0.079643					188	95	3	0	0	0	0.84341	1	4845	4845		24.203	1.1603	1	748250			44740	12670	29975	29988	50669	50669					0.015733065396602797
QGGCLPRL	8	Unmodified	_QGGCLPRL_					0	0	0		ENST00000490381.1_1_20:36963896-36965583:+|nuORF	ENST00000490381.1_1_20:36963896-36965583:+|nuORF	ENST00000490381.1_1_20:36963896-36965583:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.5929260253906	2	422.228905	842.443257	0.27206	0.00011487	-1.8727	-0.00079069	-1.6006	-0.00067582	422.22812105055476	51.95	0.46188	52.374	51.979	52.441	0.42348					17	10	2	0	0	0	0.4196	1	5175	5175		38.806	14.603	1	211410			44741	12670	29975	29988	50670	50670					0.015733065396602797
QGGCLPRL	8	Unmodified	_QGGCLPRL_					0	0	0		ENST00000490381.1_1_20:36963896-36965583:+|nuORF	ENST00000490381.1_1_20:36963896-36965583:+|nuORF	ENST00000490381.1_1_20:36963896-36965583:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	422.228905	842.443257	-1.702	-0.00071865	0.1368	5.7761E-05	-1.5652	-0.00066089	422.22883866736527	52.403	1.4694	52.403	51.586	53.056	0	0.062585	0.00031555	NaN	23.042	99	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	398730			44742	12670	29975	29988							0.015733065396602797
QGGDPETCHPL	11	Unmodified	_QGGDPETCHPL_					0	0	0			REV__ENST00000360222.8_1_19:14857708-14876689:-|nuORF	REV__ENST00000360222.8_1_19:14857708-14876689:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3694458007812	2	577.250763	1152.48697	-0.94303	-0.00054437	1.4165	0.00081768	0.47347	0.00027331	577.2514712811886	38.095	0.46917	38.408	38.2	38.669	0.31312					23	11	3	0	0	0	0.17502	1	3119	3119		36.447	14.487	1	425940	+		44743	25472	29976	29989	50671	50671					-0.08317173544514844
QGGGGGGG	8	Unmodified	_QGGGGGGG_					0	0	0		nc|ENSG00000119318|P54727-2|RAD23B;ENSG00000119318|ENST00000358015|RAD23B;nc|ENSG00000099783|P52272-2|HNRNPM;nc|ENSG00000151322|Q8IXF0-4|NPAS3;nc|ENSG00000151322|Q8IXF0-2|NPAS3;nc|ENSG00000151322|Q8IXF0-3|NPAS3;ENSG00000151322|ENST00000356141|NPAS3;chr14:32935003-33215182|13|21.85|0.31|6.14|+|ENST00000551634|NPAS3,NPAS3;chr14:33215426-33367192|18|10.78|0.44|4.62|+|ENST00000551492|NPAS3,NPAS3;chr14:32935003-33055905|21|18.76|0.18|6.7|+|ENST00000551492|NPAS3,NPAS3;ENSG00000161671|ENST00000334976|EMC10;ENSG00000099783|ENST00000325495|HNRNPM	nc|ENSG00000119318|P54727-2|RAD23B;REV__ENSG00000112541|ENST00000539869|PDE10A;nc|ENSG00000151322|Q8IXF0-4|NPAS3;REV__ENST00000487509.6_1_16:31199536-31202756:+|nuORF;REV__nc|ENSG00000162923|Q9H7D7-2|WDR26;REV__nc|ENSG00000197451|Q99729-3|HNRNPAB;ENSG00000099783|ENST00000325495|HNRNPM	nc|ENSG00000151322|Q8IXF0-4|NPAS3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.259521484375	1	546.226665	545.219388	-0.03537	-1.932E-05	-2.1543	-0.0011767	-2.1897	-0.0011961	546.2253424690483	19.011	0.69307	18.381	18.018	18.711	-0.6296					19	15	2	0	0	0	0.4196	1	478	478		0	0	1	128460			44744	167;20862;23232;3060;17951;16969;1764	29977	29990	50672	50672					-0.07141265570089672
QGGGGGGG	8	Unmodified	_QGGGGGGG_					0	0	0		nc|ENSG00000119318|P54727-2|RAD23B;ENSG00000119318|ENST00000358015|RAD23B;nc|ENSG00000099783|P52272-2|HNRNPM;nc|ENSG00000151322|Q8IXF0-4|NPAS3;nc|ENSG00000151322|Q8IXF0-2|NPAS3;nc|ENSG00000151322|Q8IXF0-3|NPAS3;ENSG00000151322|ENST00000356141|NPAS3;chr14:32935003-33215182|13|21.85|0.31|6.14|+|ENST00000551634|NPAS3,NPAS3;chr14:33215426-33367192|18|10.78|0.44|4.62|+|ENST00000551492|NPAS3,NPAS3;chr14:32935003-33055905|21|18.76|0.18|6.7|+|ENST00000551492|NPAS3,NPAS3;ENSG00000161671|ENST00000334976|EMC10;ENSG00000099783|ENST00000325495|HNRNPM	nc|ENSG00000119318|P54727-2|RAD23B;REV__ENSG00000112541|ENST00000539869|PDE10A;nc|ENSG00000151322|Q8IXF0-4|NPAS3;REV__ENST00000487509.6_1_16:31199536-31202756:+|nuORF;REV__nc|ENSG00000162923|Q9H7D7-2|WDR26;REV__nc|ENSG00000197451|Q99729-3|HNRNPAB;ENSG00000099783|ENST00000325495|HNRNPM	nc|ENSG00000151322|Q8IXF0-4|NPAS3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		1	546.226665	545.219388	0.73215	0.00039992	-2.9219	-0.001596	-2.1898	-0.0011961	546.2248805025807	18.193	0.2185	18.268	18.125	18.344	0.075443	-0.056498	-0.00028101	NaN	0	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30377			44745	167;20862;23232;3060;17951;16969;1764	29977	29990							-0.07141265570089672
QGGGGGGGG	9	Unmodified	_QGGGGGGGG_					0	0	0		nc|ENSG00000151322|Q8IXF0-4|NPAS3;nc|ENSG00000151322|Q8IXF0-2|NPAS3;nc|ENSG00000151322|Q8IXF0-3|NPAS3;ENSG00000151322|ENST00000356141|NPAS3;chr14:32935003-33215182|13|21.85|0.31|6.14|+|ENST00000551634|NPAS3,NPAS3;chr14:33215426-33367192|18|10.78|0.44|4.62|+|ENST00000551492|NPAS3,NPAS3;chr14:32935003-33055905|21|18.76|0.18|6.7|+|ENST00000551492|NPAS3,NPAS3;ENSG00000161671|ENST00000334976|EMC10	nc|ENSG00000151322|Q8IXF0-4|NPAS3;REV__nc|ENSG00000162923|Q9H7D7-2|WDR26;REV__nc|ENSG00000197451|Q99729-3|HNRNPAB	nc|ENSG00000151322|Q8IXF0-4|NPAS3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	603.1781616210938	1	603.248128	602.240852	0.8541	0.00051524	-1.3209	-0.00079681	-0.46677	-0.00028158	603.2470728236675	76.279	0.54423	76.679	76.532	77.077	0.39969					19	13	2	0	0	0	0.20789	1	8702	8702		3.9852	0	1	153600			44746	167;20862;23232	29978	29991	50673	50673					-0.07617880541374689
QGGHSQGH	8	Unmodified	_QGGHSQGH_					0	0	0		ENSG00000130254|ENST00000252542|SAFB2;ENST00000587802.5_1_19:5587256-5588971:-|nuORF	ENSG00000130254|ENST00000252542|SAFB2	ENSG00000130254|ENST00000252542|SAFB2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.1701965332031	2	404.178258	806.341963	0.015122	6.1122E-06	3.6879	0.0014906	3.703	0.0014967	404.17970425774394	78.685	0.35143	78.631	78.4	78.751	-0.053558					12	8	2	0	0	0	0.4196	1	7841	7841		45.952	13.997	1	76957			44747	3627	29979	29992	50674	50674					-0.0689542883866352
QGGHSQGH	8	Unmodified	_QGGHSQGH_					0	0	0		ENSG00000130254|ENST00000252542|SAFB2;ENST00000587802.5_1_19:5587256-5588971:-|nuORF	ENSG00000130254|ENST00000252542|SAFB2	ENSG00000130254|ENST00000252542|SAFB2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.170166015625	2	404.178258	806.341963	0.53186	0.00021497	3.1306	0.0012653	3.6625	0.0014803	404.17970718201605	78.336	0.35894	78.472	78.354	78.713	0.13667					12	9	2	0	0	0	0.4196	1	7393	7393		53.351	32.405	1	43517			44748	3627	29979	29992	50675	50675					-0.0689542883866352
QGGLERRRCLI	11	Unmodified	_QGGLERRRCLI_					0	0	0			REV__ENST00000487903.5_1_13:113344735-113459305:+|nuORF	REV__ENST00000487903.5_1_13:113344735-113459305:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78021240234375	3	434.247067	1299.71937	-0.67449	-0.0002929	1.5716	0.00068247	0.89712	0.00038957	434.24772025506195	34.861	2.027	34.804	34.262	36.289	-0.056381					125	45	4	0	0	0	0.17553	1	2174	2174		29.551	0	1	278600	+		44749	27584	29980	29993	50676	50676					0.08150133316780739
QGGMGFTQ	8	Unmodified	_QGGMGFTQ_					0	0	0		ENST00000442885.2_1_11:65655295-65655958:-|nuORF	ENST00000442885.2_1_11:65655295-65655958:-|nuORF	ENST00000442885.2_1_11:65655295-65655958:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1839294433594	2	413.18162	824.348688	2.3001	0.00095037	1.4681	0.00060658	3.7682	0.0015569	413.18257983004736	99.112	0.94866	99.474	99.096	100.04	0.36137					76	23	5	0	0	0	0.8347	1	12006	12006		23.042	1.3402	1	10767000			44750	11798	29981	29994	50677	50677					-0.07051252002315778
QGGPAPRE	8	Unmodified	_QGGPAPRE_					0	0	0		ENSG00000100354|ENST00000454349|TNRC6B;nc|ENSG00000100354|Q9UPQ9-1|TNRC6B	ENSG00000100354|ENST00000454349|TNRC6B	ENSG00000100354|ENST00000454349|TNRC6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2076721191406	2	406.206484	810.398415	0.41441	0.00016834	0.23601	9.587E-05	0.65042	0.00026421	406.2065018547303	28.048	0.60811	27.951	27.576	28.184	-0.096947					19	13	2	0	0	0	0.8347	1	1679	1679		23.042	0	1	154750			44751	1833	29982	29995	50678	50678					-0.014368010020120892
QGGPLRRSTQ	10	Unmodified	_QGGPLRRSTQ_					0	0	0		ENST00000468535.5_1_7:1586590-1589169:-|nuORF	ENST00000468535.5_1_7:1586590-1589169:-|nuORF	ENST00000468535.5_1_7:1586590-1589169:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3035888671875	2	550.301978	1098.5894	-0.16311	-8.9759E-05	3.9211	0.0021578	3.758	0.002068	550.3039343164278	22	0.63786	21.39	21.072	21.71	-0.6107					31	15	3	0	0	0	0.62712	1	848	848		48.602	8.5434	1	239270			44752	12180	29983	29996	50679	50679					0.04405280309288173
QGGPRGPGQGH	11	Unmodified	_QGGPRGPGQGH_					0	0	0		ENST00000482556.5_1_20:47242425-47249020:-|nuORF	ENST00000482556.5_1_20:47242425-47249020:-|nuORF	ENST00000482556.5_1_20:47242425-47249020:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2769775390625	2	524.257571	1046.50059	2.8162	0.0014764	-1.494	-0.00078322	1.3223	0.00069322	524.2570952760673	25.736	0.45772	25.305	24.939	25.396	-0.4311					18	10	3	0	0	0	0.17383	1	1362	1362		39.253	3.6345	1	123770			44753	12488	29984	29997	50680	50680					-0.020801349303837924
QGGRVPTPP	9	Unmodified	_QGGRVPTPP_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	454.7518005371094	2	454.751059	907.487565	-1.6847	-0.00076611	2.3264	0.001058	0.64176	0.00029184	454.7515981670757	53.014	0.66855	53.014	52.679	53.348	0					25	17	2	0	0	0	0.64922	1	4385	4385		44.117	0	1	77189	+		44754	18431	29985	29998	50681	50681					0.030120339575091748
QGHGSQSH	8	Unmodified	_QGHGSQSH_					0	0	0			REV__ENSG00000143520|ENST00000388718|FLG2	REV__ENSG00000143520|ENST00000388718|FLG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.1839294433594	2	419.18354	836.352528	-1.7869	-0.00074903	1.3839	0.00058011	-0.40298	-0.00016892	419.1843260040602	87.259	0.73129	87.461	87.112	87.843	0.20115					34	16	3	0	0	0	0.85277	1	8618	8618		25.45	0	1	593320	+	+	44755	16019	29986	29999	50682	50682					-0.07219446184228673
QGHGSQSH	8	Unmodified	_QGHGSQSH_					0	0	0			REV__ENSG00000143520|ENST00000388718|FLG2	REV__ENSG00000143520|ENST00000388718|FLG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.1837463378906	2	419.18354	836.352528	-1.8893	-0.00079194	2.0181	0.00084595	0.12883	5.4003E-05	419.1843404237986	100.11	1.0511	100.28	99.803	100.85	0.172					47	23	3	0	0	0	0.85277	1	10365	10365		25.45	4.5032	1	376750	+	+	44756	16019	29986	29999	50683	50683					-0.07219446184228673
QGHNGSSH	8	Unmodified	_QGHNGSSH_					0	0	0			REV__ENSG00000167720|ENST00000344595|SRR	REV__ENSG00000167720|ENST00000344595|SRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.1756591796875	2	412.175715	822.336878	-1.8024	-0.00074289	1.3357	0.00055053	-0.46669	-0.00019236	412.1764055196895	94.607	2.9265	94.838	94.324	97.25	0.23103					168	69	5	0	0	0	0.86288	1	9638	9638		26.796	0	1	14636000	+		44757	21423	29987	30000	50684	50684					-0.0813973270128372
QGHNGSSH	8	Unmodified	_QGHNGSSH_					0	0	0			REV__ENSG00000167720|ENST00000344595|SRR	REV__ENSG00000167720|ENST00000344595|SRR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.17559814453125	2	412.175715	822.336878	0.33777	0.00013922	-1.869	-0.00077035	-1.5312	-0.00063113	412.1757826354691	95.171	5.6015	95.591	94.66	100.26	0.41964					346	137	6	0	0	0	0.88915	1	11368	11368		35.201	0	1	156020000	+		44758	21423	29987	30000	50685	50685					-0.0813973270128372
QGIHQFLW	8	Unmodified	_QGIHQFLW_					0	0	0			REV__ENST00000607049.5_1_21:44438250-44448736:+|nuORF	REV__ENST00000607049.5_1_21:44438250-44448736:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7988891601562	2	514.769252	1027.52395	0.79067	0.00040701	-1.5162	-0.0007805	-0.72554	-0.00037349	514.7683214537043	16.218	0.47723	15.731	15.436	15.913	-0.48718					13	10	2	0	0	0	0.4196	1	112	112		14.664	0	1	129270	+		44759	29381	29988	30001	50686	50686					0.011289108542314352
QGKELQLQ	8	Unmodified	_QGKELQLQ_					0	0	0			REV__ENSG00000177992|ENST00000325643|SPATA31E1	REV__ENSG00000177992|ENST00000325643|SPATA31E1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.26348876953125	2	472.263999	942.513445	0.76763	0.00036253	-0.40865	-0.00019299	0.35898	0.00016953	472.2636171025307	20.516	0.59324	20.057	19.687	20.28	-0.4591					16	12	2	0	0	0	0.88601	1	646	646		34.173	2.2177	1	79193	+		44760	22244	29989	30002	50687	50687					0.03988883409135724
QGKGNRPI	8	Unmodified	_QGKGNRPI_					0	0	0			REV__nc|ENSG00000065029|P36508-2|ZNF76;REV__ENST00000229405.8_1_6:35254110-35258558:+|nuORF	REV__ENST00000229405.8_1_6:35254110-35258558:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2519226074219	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.84341	1	7390	7390		24.203	1.1603	1	3322700	+		44761	16490;24191	29990	30003	50688	50688					0.048394536773685104
QGKLRRRPRE	10	Unmodified	_QGKLRRRPRE_					0	0	0		ENSG00000130775|ENST00000373921|THEMIS2	ENSG00000130775|ENST00000373921|THEMIS2	ENSG00000130775|ENST00000373921|THEMIS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3961791992188	2	648.391993	1294.76943	2.6466	0.001716	-1.8533	-0.0012017	0.79323	0.00051432	648.3907938833173	114.19	1.0061	114.17	113.59	114.59	-0.024452					48	34	2	0	0	0	0.85086	1	12667	12667		19.997	2.6318	1	216020			44762	3683	29991	30004	50689	50689					0.13384004036925035
QGKTLSAGLK	10	Unmodified	_QGKTLSAGLK_					0	0	0		ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.8006286621094	2	501.800749	1001.58694	0.43303	0.00021729	-0.58117	-0.00029163	-0.14815	-7.4341E-05	501.8003359325483	19.27	0.85564	18.64	18.358	19.214	-0.6296					41	18	4	0	0	0	0.51401	1	516	516		54.722	0	1	1045200			44763	8422	29992	30005	50690	50690					0.08621431851611305
QGKTQVLIKPK	11	Unmodified	_QGKTQVLIKPK_					0	0	0		ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;ENSG00000158636|ENST00000695367|EMSY	ENST00000531641.1_1_11:76237526-76255878:+|nuORF	ENST00000531641.1_1_11:76237526-76255878:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.93182373046875	3	413.930962	1238.77106	1.6433	0.00068023	2.1649	0.00089611	3.8082	0.0015763	413.9318142026393	43.114	2.2589	43.114	42.157	44.416	0.00016785					149	54	3	0	0	0	0.77205	1	3357	3357		17.167	1.2461	1	500010			44764	5491	29993	30006	50691	50691					0.16122200282279664
QGKVTIPCP	9	Unmodified	_QGKVTIPCP_					0	0	0		ENST00000470432.5_1_1:150480640-150482267:+|nuORF	ENST00000470432.5_1_1:150480640-150482267:+|nuORF	ENST00000470432.5_1_1:150480640-150482267:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.25445556640625	2	471.757495	941.500437	-0.88718	-0.00041854	-1.9368	-0.00091372	-2.824	-0.0013323	471.7560529350376	50.57	0.49906	50.578	50.301	50.8	0.0077438					17	13	2	0	0	0	0.20789	1	4320	4320		32.812	12.816	1	124650			44765	12222	29994	30007	50692	50692					0.027347290253942447
QGKYGNVTK	9	Unmodified	_QGKYGNVTK_					0	0	0		ENSG00000184619|ENST00000396267|KRBA2;nc|ENSG00000184619|Q6ZNG9|KRBA2	ENSG00000184619|ENST00000396267|KRBA2	ENSG00000184619|ENST00000396267|KRBA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7687683105469	2	497.769448	993.524344	-0.46792	-0.00023292	3.7254	0.0018544	3.2575	0.0016215	497.7711513163207	26.209	0.8904	25.952	25.551	26.441	-0.25721					41	19	3	0	0	0	0.11055	1	1445	1445		90.37	13.596	1	1659300			44766	7630	29995	30008	50693	50693					0.02732285783417865
QGLAAVHLLP	10	Unmodified	_QGLAAVHLLP_					0	0	0			REV__nc|ENSG00000158941|Q8N163-2|CCAR2	REV__nc|ENSG00000158941|Q8N163-2|CCAR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8038024902344	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.86452	1	8379	8379		30.504	2.2494	1	2989000	+		44767	20630	29996	30009	50694	50694					0.08902039576844345
QGLLKGLVCRL	11	Unmodified	_QGLLKGLVCRL_					0	0	0			REV__ENST00000530819.1_2_11:93517451-93521351:+|nuORF	REV__ENST00000530819.1_2_11:93517451-93521351:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.58013916015625	3	400.581276	1198.722	0.73385	0.00029397	-2.6784	-0.0010729	-1.9445	-0.00077895	400.58015542087406	111.26	0.52737	111.33	110.97	111.5	0.069542					32	20	2	0	0	0	0.7896	1	11985	11985		13.508	1.0751	1	556140	+		44768	28289	29997	30010	50695	50695					0.13058588721719389
QGLQLGLKQ	9	Unmodified	_QGLQLGLKQ_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.79541015625	2	492.795466	983.57638	0.25206	0.00012421	-0.35471	-0.0001748	-0.10265	-5.0586E-05	492.79512939166796	22.846	0.79203	22.427	22.016	22.808	-0.41879					34	18	3	0	0	0	0.18601	1	952	952		76.774	7.9873	1	310770	+		44769	18883	29998	30011	50696	50696					0.08393449197171776
QGLQLGLKQ	9	Unmodified	_QGLQLGLKQ_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	492.795466	983.57638	0.73703	0.00036321	-5.1908	-0.002558	-4.4537	-0.0021948	492.79400884622277	23.316	0.2167	22.742	22.62	22.836	-0.57415	0.15724	-0.004552	NaN	76.774	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27463	+		44770	18883	29998	30011							0.08393449197171776
QGLTYSTVVI	10	Unmodified	_QGLTYSTVVI_					0	0	0			REV__ENSG00000164543|ENST00000319357|STK17A	REV__ENSG00000164543|ENST00000319357|STK17A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.80078125	2	540.800414	1079.58628	-0.34188	-0.00018489	0.62781	0.00033952	0.28593	0.00015463	540.8005392456347	72.983	0.65971	73.537	73.191	73.851	0.55386					37	16	3	0	0	0	0.3985	1	8195	8195		64.207	4.089	1	1189500	+		44771	21090	29999	30012	50697	50697					0.049665924119153715
QGLVFTSRRLP	11	Unmodified	_QGLVFTSRRLP_					0	0	0		ENSG00000243477|ENST00000443094|NAA80;nc|ENSG00000243477|Q93015-2|NAA80	ENSG00000243477|ENST00000443094|NAA80	ENSG00000243477|ENST00000443094|NAA80	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.774658203125	3	425.250695	1272.73025	0.53562	0.00022777	-3.271	-0.001391	-2.7353	-0.0011632	425.5830676723299	37.645	0.85483	38.131	37.662	38.516	0.48581					27	21	2	0	0	0	0.17244	1	3019	3019		31.068	1.5174	1	132150			44772	8808	30000	30013	50698	50698					0.10479858962708022
QGMVSEVVVV	10	Unmodified	_QGMVSEVVVV_					0	0	0			REV__ENST00000431994.5_1_16:32890029-32891910:-|nuORF	REV__ENST00000431994.5_1_16:32890029-32891910:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3035278320312	2	523.781167	1045.54778	-0.17122	-8.9683E-05	1.6614	0.00087019	1.4901	0.0007805	523.7811972875722	87.25	0.42926	87.451	87.242	87.671	0.20114					13	9	2	0	0	0	0.37624	1	8622	8622		19.104	2.6304	1	47096	+		44773	26629	30001	30014	50699	50699					0.026829635057538326
QGNHLSGIY	9	Unmodified	_QGNHLSGIY_					0	0	0		chr5:164486741-164722765|25|13.64|0.1|7.03|+|0|LINC03000,LINC03000|1	chr5:164486741-164722765|25|13.64|0.1|7.03|+|0|LINC03000,LINC03000|1	chr5:164486741-164722765|25|13.64|0.1|7.03|+|0|LINC03000,LINC03000|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.74676513671875	2	494.745973	987.477394	1.0031	0.00049629	-0.78594	-0.00038884	0.21718	0.00010745	494.74542470137317	19.776	0.3728	19.847	19.665	20.038	0.071127					30	14	3	0	0	0	0.67345	1	431	431		42.396	0	1	78653			44774	447	30002	30015	50700	50700					-0.016845737677272155
QGPLGLKSSR	10	Unmodified	_QGPLGLKSSR_					0	0	0			REV__ENST00000305798.7_1_4:99579386-99579464:-|nuORF	REV__ENST00000305798.7_1_4:99579386-99579464:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.805419921875	2	521.803823	1041.59309	-0.11311	-5.9022E-05	4.3887	0.00229	4.2756	0.002231	521.8059245005005	44.852	1.3013	45.315	44.578	45.88	0.46313					77	31	3	0	0	0	0.85692	1	4089	4089		36.318	0.69936	1	1090800	+		44775	24818	30003	30016	50701	50701					0.073959500831279
QGPLLLPLEPT	11	Unmodified	_QGPLLLPLEPT_					0	0	0			REV__ENST00000233813.4_1_2:217540818-217540989:-|nuORF	REV__ENST00000233813.4_1_2:217540818-217540989:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.342529296875	2	589.344989	1176.67542	-0.67475	-0.00039766	-3.0874	-0.0018195	-3.7621	-0.0022172	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.7434	1	9508	9508		23.523	0	1	5429300	+		44776	24206	30004	30017	50702	50702					0.09415427371413898
QGPRALQSA	9	Unmodified	_QGPRALQSA_					0	0	0		chr6:70699512-70732378|16|17.38|0.56|4.96|+|0|TE_info:L1MA3,L1MA3_dup3493,L1,LINE,donor,-,70697606,70699512|None,SMAP1|37	chr6:70699512-70732378|16|17.38|0.56|4.96|+|0|TE_info:L1MA3,L1MA3_dup3493,L1,LINE,donor,-,70697606,70699512|None,SMAP1|37	chr6:70699512-70732378|16|17.38|0.56|4.96|+|0|TE_info:L1MA3,L1MA3_dup3493,L1,LINE,donor,-,70697606,70699512|None,SMAP1|37	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2533264160156	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.77696	1	8624	8624		31.53	0	1	1673200			44777	482	30005	30018	50703	50703					0.02719132469167107
QGPRRRGLVRS	11	Unmodified	_QGPRRRGLVRS_					0	0	0			REV__nc|ENSG00000176510|Q8NH08|OR10AC1	REV__nc|ENSG00000176510|Q8NH08|OR10AC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.3847045898438	2	641.384168	1280.75378	-1.1549	-0.00074073	1.5236	0.00097724	0.36875	0.00023651	641.3847498029768	102.62	1.032	102.75	102.41	103.44	0.13569					59	25	4	0	0	0	0.72106	1	10754	10754		28.081	5.5018	1	1426400	+		44778	30052	30006	30019	50704	50704					0.12463717519858619
QGPSKDKVAVL	11	Unmodified	_QGPSKDKVAVL_					0	0	0		ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3	ENSG00000008300|ENST00000164024|CELSR3	ENSG00000008300|ENST00000164024|CELSR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.3302612304688	2	571.332413	1140.65027	-1.1055	-0.00063161	-1.221	-0.00069761	-2.3265	-0.0013292	571.3317125893625	102.4	2.1601	102.42	101.65	103.81	0.01989					122	52	4	0	0	0	0.66009	1	11055	11055		37.508	3.3356	1	2384600			44779	741	30007	30020	50705	50705					0.08557372568861865
QGPTSPAQLY	10	Unmodified	_QGPTSPAQLY_					0	0	0			REV__ENSG00000185958|ENST00000327337|FAM186A	REV__ENSG00000185958|ENST00000327337|FAM186A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2671508789062	2	531.266739	1060.51892	-0.19781	-0.00010509	0.24084	0.00012795	0.043023	2.2857E-05	531.2667161695381	45.104	0.77737	45.567	45.264	46.041	0.46313					40	18	3	0	0	0	0.51302	1	4192	4192		54.776	1.4249	1	1576900	+		44780	22813	30008	30021	50706	50706					-0.008914377990549838
QGPVDAHLVP	10	Unmodified	_QGPVDAHLVP_					0	0	0		ENSG00000176170|ENST00000592299|SPHK1;nc|ENSG00000176170|Q9NYA1-3|SPHK1;nc|ENSG00000176170|Q9NYA1-2|SPHK1	ENSG00000176170|ENST00000592299|SPHK1	ENSG00000176170|ENST00000592299|SPHK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.77978515625	2	516.777274	1031.53999	-0.53903	-0.00027856	0.21487	0.00011104	-0.32416	-0.00016752	516.7775852931438	47.442	0.87286	47.914	47.476	48.349	0.47139					76	21	6	0	0	0	0.74274	1	4539	4539		42.396	8.8806	1	3356300			44781	7060	30009	30022	50707	50707					0.02548572300474916
QGPVRVPLWV	10	Unmodified	_QGPVRVPLWV_					0	0	0		nc|ENSG00000188566|Q9UHB4-3|NDOR1;nc|ENSG00000188566|Q9UHB4-4|NDOR1;ENSG00000188566|ENST00000684003|NDOR1;nc|ENSG00000188566|Q9UHB4-2|NDOR1	nc|ENSG00000188566|Q9UHB4-3|NDOR1	nc|ENSG00000188566|Q9UHB4-3|NDOR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8428344726562	2	575.840208	1149.66586	0.80402	0.00046299	3.8245	0.0022023	4.6286	0.0026653	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.85939	1	9313	9313		23.042	1.0826	1	6947200			44782	7937	30010	30023	50708	50708					0.09701703876544343
QGQAKRLRQRL	11	Unmodified	_QGQAKRLRQRL_					0	0	0			REV__ENSG00000176531|ENST00000292140|PHLDB3	REV__ENSG00000176531|ENST00000292140|PHLDB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.2777404785156	3	451.944376	1352.8113	0.2172	9.8162E-05	-2.8737	-0.0012987	-2.6565	-0.0012006	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.77205	1	4610	4610		17.167	0	1	771970	+		44783	22131	30011	30024	50709	50709					0.14900559725447238
QGQAKRLRQRL	11	Unmodified	_QGQAKRLRQRL_					0	0	0			REV__ENSG00000176531|ENST00000292140|PHLDB3	REV__ENSG00000176531|ENST00000292140|PHLDB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9427490234375	3	451.944376	1352.8113	-1.2962	-0.0005858	-1.4594	-0.00065959	-2.7556	-0.0012454	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.74022	1	4408	4408		24.232	2.4514	1	734340	+		44784	22131	30011	30024	50710	50710					0.14900559725447238
QGQAKRLRQRL	11	Unmodified	_QGQAKRLRQRL_					0	0	0			REV__ENSG00000176531|ENST00000292140|PHLDB3	REV__ENSG00000176531|ENST00000292140|PHLDB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9438171386719	3	451.944376	1352.8113	-1.2917	-0.0005838	-1.0632	-0.0004805	-2.3549	-0.0010643	451.94377054874303	55.311	1.3656	55.375	54.704	56.07	0.063725					141	47	4	0	0	0	0.74771	2	4615	4615;4633		22.562	4.0305	1	457030	+		44785	22131	30011	30024	50711;50712	50711					0.14900559725447238
QGQAKRLRQRL	11	Unmodified	_QGQAKRLRQRL_					0	0	0			REV__ENSG00000176531|ENST00000292140|PHLDB3	REV__ENSG00000176531|ENST00000292140|PHLDB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9423522949219	3	451.944376	1352.8113	-0.53385	-0.00024127	-2.2464	-0.0010153	-2.7803	-0.0012565	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.72374	2	4265	4265;4343		27.644	0.89421	1	920720	+		44786	22131	30011	30024	50713;50714	50713					0.14900559725447238
QGQAPIAAR	9	Unmodified	_QGQAPIAAR_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6079406738281	2	456.256508	910.498464	-1.2026	-0.00054871	2.4653	0.0011248	1.2627	0.00057612	456.25810942110064	72.35	0.18027	72.43	72.295	72.475	0.080025					5	4	2	0	0	0	0.20789	1	6592	6592		27.882	7.4004	1	17786			44787	7573	30012	30025	50715	50715					0.03963436331787307
QGQIAVGET	9	Unmodified	_QGQIAVGET_					0	0	0			REV__ENSG00000155561|ENST00000285968|NUP205	REV__ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.7341003417969	2	451.732532	901.45051	4.0099	0.0018114	-0.17377	-7.8499E-05	3.8362	0.0017329	451.73235845208677	105.55	0.65421	105.73	105.44	106.09	0.18647					30	15	3	0	0	0	0.74721	1	12905	12905		37.159	1.5408	1	267700	+		44788	20433	30013	30026	50716	50716					-0.0041568237888895965
QGQIAVGET	9	Unmodified	_QGQIAVGET_					0	0	0			REV__ENSG00000155561|ENST00000285968|NUP205	REV__ENSG00000155561|ENST00000285968|NUP205	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	451.732532	901.45051	1.0785	0.00048718	2.3915	0.0010803	3.4699	0.0015675	451.73371120029606	105.6	0.57723	105.76	105.43	106.01	0.15583	0.012173	0.0016963	NaN	37.159	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	285210	+		44789	20433	30013	30026							-0.0041568237888895965
QGQIAVGET	9	Unmodified	_QGQIAVGET_					0	0	0			REV__ENSG00000155561|ENST00000285968|NUP205	REV__ENSG00000155561|ENST00000285968|NUP205	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	451.732532	901.45051	4.0099	0.0018114	-0.17377	-7.8499E-05	3.8362	0.0017329	451.73235845208677	105.55	0.65421	105.73	105.44	106.09	0.18647	-0.012173	-0.00062127	NaN	37.159	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	267700	+		44790	20433	30013	30026							-0.0041568237888895965
QGQKGKVVFFA	11	Unmodified	_QGQKGKVVFFA_					0	0	0		nc|ENSG00000107201|O95786-2|RIGI;ENSG00000107201|ENST00000379883|RIGI	nc|ENSG00000107201|O95786-2|RIGI	nc|ENSG00000107201|O95786-2|RIGI	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.846923828125	2	604.842948	1207.67134	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.045	1	96.989	96.489	97.489	-0.055679								0	0	0	0.56276	1	10424	10424		26.693	1.1189	1				44791	2335	30014	30027	50717	50717					0.07581382668377046
QGQSSDSCLPE	11	Unmodified	_QGQSSDSCLPE_					0	0	0			REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.3661499023438	2	575.737685	1149.46082	0.15521	8.9362E-05	0.45457	0.00026171	0.60978	0.00035108	575.7377634389097	18.697	0.10601	18.763	18.691	18.797	0.066298					5	4	2	0	0	0	0.17472	1	360	360		12.812	0	1	72177	+		44792	23012	30015	30028	50718	50718					-0.10793487506657584
QGRLKGSA	8	Unmodified	_QGRLKGSA_					0	0	0			REV__ENST00000433853.1_1_3:183867695-183868220:+|nuORF	REV__ENST00000433853.1_1_3:183867695-183868220:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7394714355469	2	408.737951	815.46135	0.14715	6.0146E-05	4.0233	0.0016445	4.1704	0.0017046	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.89494	1	2110	2110		37.159	2.9866	1	1448600	+		44793	26657	30016	30029	50719	50719					0.04623764786038009
QGRLLCELFI	10	Unmodified	_QGRLLCELFI_					0	0	0		nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1;ENSG00000163939|ENST00000707071|PBRM1	nc|ENSG00000163939|Q86U86-6|PBRM1	nc|ENSG00000163939|Q86U86-6|PBRM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.3328857421875	2	596.331359	1190.64816	2.639	0.0015737	-0.18675	-0.00011137	2.4522	0.0014623	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.8608	1	10392	10392		34.173	1.422	1	1305600			44794	5888	30017	30030	50720	50720					0.06046620559368421
QGRRRQPR	8	Unmodified	_QGRRRQPR_					0	0	0		nc|ENSG00000188827|Q8IY92-2|SLX4;ENSG00000188827|ENST00000294008|SLX4	nc|ENSG00000188827|Q8IY92-2|SLX4	nc|ENSG00000188827|Q8IY92-2|SLX4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.8346557617188	2	527.310472	1052.60639	0.40218	0.00021207	1.8342	0.0009672	2.2364	0.0011793	527.3113890007025	30.296	0.56906	30.206	29.917	30.486	-0.089544					28	12	3	0	0	0	0.4196	1	1971	1971		30.504	2.6214	1	185310			44795	7965	30018	30031	50721	50721					0.08219245705731737
QGRTARAV	8	Unmodified	_QGRTARAV_					0	0	0			REV__ENST00000327492.3_1_22:41842635-41842764:-|nuORF	REV__ENST00000327492.3_1_22:41842635-41842764:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.7501220703125	2	429.74885	857.483148	0.0083591	3.5923E-06	3.7287	0.0016024	3.7371	0.001606	429.7502794012024	35.489	2.8966	35.429	35.209	38.105	-0.060337					197	86	4	0	0	0	0.91977	1	1911	1911		45.952	0	1	1630800	+		44796	25090	30019	30032	50722	50722					0.04870569534602964
QGSLAQAQAL	10	Unmodified	_QGSLAQAQAL_					0	0	0			REV__ENST00000494080.5_1_11:64109984-64120281:+|nuORF	REV__ENST00000494080.5_1_11:64109984-64120281:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.76739501953125	2	493.766906	985.519259	-1.2476	-0.00061604	4.4806	0.0022124	3.233	0.0015963	493.76913660103617	61.566	0.55843	61.954	61.671	62.229	0.38846					21	12	2	0	0	0	0.60985	1	6575	6575		49.536	5.4192	1	160760	+		44797	27710	30020	30033	50723	50723					0.025919819208070294
QGSRSPVTVVA	11	Unmodified	_QGSRSPVTVVA_					0	0	0		nc|ENSG00000206561|Q9Y215-6|COLQ	nc|ENSG00000206561|Q9Y215-6|COLQ	nc|ENSG00000206561|Q9Y215-6|COLQ	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.8062133789062	2	550.806562	1099.59857	-1.5149	-0.00083443	1.5031	0.00082789	-0.011875	-6.5411E-06	550.8072735830477	30.077	0.6332	30.077	29.793	30.426	0					50	19	3	0	0	0	0.55601	1	1359	1359		47.96	8.7067	1	258040			44798	15226	30021	30034	50724	50724					0.05275628874960603
QGTGFVRLR	9	Unmodified	_QGTGFVRLR_					0	0	0			REV__ENSG00000151360|ENST00000252505|ALLC	REV__ENSG00000151360|ENST00000252505|ALLC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.8151245117188	2	517.298707	1032.58286	2.3749	0.0012285	0.91935	0.00047558	3.2942	0.0017041	517.298766397339	101.07	0.56776	101.39	100.96	101.52	0.32511					31	14	3	0	0	0	0.78124	1	12304	12304		30.318	1.1682	1	328300	+		44799	20247	30022	30035	50725	50725					0.06787387148551716
QGTSCPSAG	9	Unmodified	_QGTSCPSAG_					0	0	0		ENST00000521665.1_1_5:156533808-156533979:-|nuORF;ENST00000307851.8_1_5:156533808-156536017:-|nuORF	ENST00000521665.1_1_5:156533808-156533979:-|nuORF	ENST00000521665.1_1_5:156533808-156533979:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.17041015625	2	404.16871	806.322867	0.53213	0.00021507	2.6453	0.0010691	3.1774	0.0012842	404.1699082116052	78.324	2.0905	78.461	78.03	80.121	0.13667					171	70	5	0	0	0	0.78536	1	7448	7448		29.15	6.1071	1	7251300			44800	9879	30023	30036	50726	50726					-0.08804146244585809
QGTTRLDRPR	10	Unmodified	_QGTTRLDRPR_					0	0	0			REV__chr16:57092790-57113288|17|12.53|0.19|6.05|+|1|CPNE2,CPNE2|2	REV__chr16:57092790-57113288|17|12.53|0.19|6.05|+|1|CPNE2,CPNE2|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.55859375	3	400.558299	1198.65307	0.91168	0.00036518	-0.37978	-0.00015213	0.5319	0.00021306	400.5580759097414	19.227	0.64959	19.301	19.049	19.698	0.073463					57	20	4	0	0	0	0.67571	1	370	370		50.034	6.3827	1	362530	+		44801	15633	30024	30037	50727	50727					0.06168640746341225
QGTTRLDRPR	10	Unmodified	_QGTTRLDRPR_					0	0	0			REV__chr16:57092790-57113288|17|12.53|0.19|6.05|+|1|CPNE2,CPNE2|2	REV__chr16:57092790-57113288|17|12.53|0.19|6.05|+|1|CPNE2,CPNE2|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.55853271484375	3	400.558299	1198.65307	2.9038	0.0011631	-2.4425	-0.00097838	0.46129	0.00018477	400.55722775640623	19.611	0.7765	19.541	19.308	20.084	-0.070013					69	31	4	0	0	0	0.67571	1	437	437		42.338	0	1	403570	+		44802	15633	30024	30037	50728	50728					0.06168640746341225
QGVEFHYVY	9	Unmodified	_QGVEFHYVY_					0	0	0		ENSG00000143815|ENST00000272163|LBR	ENSG00000143815|ENST00000272163|LBR	ENSG00000143815|ENST00000272163|LBR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.2708129882812	2	571.269281	1140.52401	0.59191	0.00033814	-0.98193	-0.00056094	-0.39002	-0.00022281	571.2685112746926	58.195	0.82882	58.748	58.428	59.257	0.55323					38	19	3	0	0	0	0.31972	2	6114	6099;6114		63.306	7.8021	1	595250			44803	4665	30025	30038	50729;50730	50730					-0.04063133936415397
QGVKLFRF	8	Unmodified	_QGVKLFRF_					0	0	0		ENSG00000183054|ENST00000329516|RGPD6;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000015568|ENST00000016946|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000196862|ENST00000408999|RGPD4;ENSG00000153165|ENST00000409886|RGPD3	ENSG00000183054|ENST00000329516|RGPD6	ENSG00000183054|ENST00000329516|RGPD6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.7955627441406	2	497.795269	993.575986	-1.5169	-0.00075511	2.6411	0.0013147	1.1242	0.00055963	497.7963799927103	49.017	1.345	49.017	48.626	49.971	0					75	31	3	0	0	0	0.85277	1	3872	3872		25.45	0	1	491380			44804	825	30026	30039	50731	50731					0.07894074267983342
QGVLFALKH	9	Unmodified	_QGVLFALKH_					0	0	0			REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7994079589844	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.107	1	51.107	50.607	51.607	0								0	0	0	0.30053	1	4121	4121		30.504	3.7075	1		+		44805	18629	30027	30040	50732	50732					0.08122056922400134
QGWRSGPTKG	10	Unmodified	_QGWRSGPTKG_					0	0	0			REV__ENST00000495690.6_1_1:156552093-156554937:+|nuORF	REV__ENST00000495690.6_1_1:156552093-156554937:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.2716064453125	2	537.277972	1072.54139	0.32498	0.00017461	-0.29796	-0.00016009	0.027026	1.4521E-05	537.2775627719318	24.386	0.89183	24.017	23.588	24.48	-0.36965					38	19	3	0	0	0	0.69342	1	1158	1158		45.022	0.9054	1	302720	+		44806	26390	30028	30041	50733	50733					0.008022063892440201
QGWTIQRGQ	9	Unmodified	_QGWTIQRGQ_					0	0	0			REV__ENST00000552818.1_1_12:48535711-48536092:+|nuORF	REV__ENST00000552818.1_1_12:48535711-48536092:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.2767944335938	2	537.277972	1072.54139	0.32498	0.00017461	-0.29796	-0.00016009	0.027026	1.4521E-05	537.2775627719318	24.386	0.89183	24.017	23.588	24.48	-0.36965					38	19	3	0	0	0	0.64555	1	1171	1171		44.377	1.5129	1	302720	+		44807	28632	30029	30042	50734	50734					0.008022063892440201
QGWTIQRGQ	9	Unmodified	_QGWTIQRGQ_					0	0	0			REV__ENST00000552818.1_1_12:48535711-48536092:+|nuORF	REV__ENST00000552818.1_1_12:48535711-48536092:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.2767333984375	2	537.277972	1072.54139	1.2388	0.00066558	-0.52711	-0.00028321	0.71169	0.00038237	537.2771822937506	24.304	0.91818	23.79	23.408	24.326	-0.51365					46	20	4	0	0	0	0.18338	1	1174	1174		77.318	2.2743	1	351380	+		44808	28632	30029	30042	50735	50735					0.008022063892440201
QGYRLDKEGN	10	Unmodified	_QGYRLDKEGN_					0	0	0		ENSG00000239961|ENST00000291759|LILRA4	ENSG00000239961|ENST00000291759|LILRA4	ENSG00000239961|ENST00000291759|LILRA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.2949829101562	2	590.291276	1178.568	-0.057665	-3.4039E-05	3.8433	0.0022687	3.7856	0.0022346	590.2951222950724	75.956	1.3937	76.525	75.668	77.062	0.56835					123	34	6	0	0	0	0.63899	1	8660	8660		47.96	7.1814	1	3913100			44809	8775	30030	30043	50736	50736					-0.01414149510083007
QHAVQAAAPP	10	Unmodified	_QHAVQAAAPP_					0	0	0			REV__ENSG00000112977|ENST00000230895|DAP	REV__ENSG00000112977|ENST00000230895|DAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2590637207031	2	495.261791	988.509028	-2.6631	-0.0013189	-2.7551	-0.0013645	-5.4182	-0.0026834	495.26028573461133	40.858	1.9733	41.25	40.867	42.841	0.39209					105	53	3	0	0	0	0.86452	1	3592	3592		30.504	0.6621	1	8396000	+		44810	17971	30031	30044	50737	50737					0.014314189862147941
QHCRAPGG	8	Unmodified	_QHCRAPGG_					0	0	0			REV__ENST00000565348.5_1_16:30484158-30495228:+|nuORF	REV__ENST00000565348.5_1_16:30484158-30495228:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7461853027344	2	413.192854	824.371155	-1.2161	-0.00050248	2.5477	0.0010527	1.3316	0.0005502	413.1942240511665	85.736	1.4244	85.736	84.788	86.212	0					67	32	3	0	0	0	0.4196	1	8065	8065		21.702	20.497	1	309470	+		44811	28854	30032	30045	50738	50738					-0.048056078140234604
QHECPNLDCVN	11	Unmodified	_QHECPNLDCVN_					0	0	0			REV__ENSG00000143126|ENST00000271332|CELSR2	REV__ENSG00000143126|ENST00000271332|CELSR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	636.262451171875	2	636.260804	1270.50706	-0.83382	-0.00053053	0.026802	1.7053E-05	-0.80702	-0.00051347	636.2607083959019	59.214	1.0647	59.605	59.19	60.255	0.39156					48	25	3	0	0	0	0.60687	1	6243	6243		43.651	1.2547	1	533370	+		44812	19771	30033	30046	50739	50739					-0.11737745876189365
QHECPNLDCVN	11	Unmodified	_QHECPNLDCVN_					0	0	0			REV__ENSG00000143126|ENST00000271332|CELSR2	REV__ENSG00000143126|ENST00000271332|CELSR2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	636.260804	1270.50706	-0.83382	-0.00053053	0.026802	1.7053E-05	-0.80702	-0.00051347	636.2607083959019	59.214	1.0647	59.605	59.19	60.255	0.39156	-0.054511	0.00043941	NaN	43.651	48	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	533370	+		44813	19771	30033	30046							-0.11737745876189365
QHELFDAP	8	Unmodified	_QHELFDAP_					0	0	0			REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.2886657714844	2	478.727249	955.439946	1.2337	0.00059061	3.7806	0.0018099	5.0144	0.0024005	478.7294929081959	34.044	0.49865	34.254	33.942	34.441	0.21003					13	11	2	0	0	0	0.4196	1	2513	2513		23.042	3.939	1	116810	+		44814	29761	30034	30047	50740	50740					-0.03955665033333844
QHGFRILF	8	Unmodified	_QHGFRILF_					0	0	0		nc|ENSG00000100083|Q9UJY5-4|GGA1;nc|ENSG00000100083|Q9UJY5-3|GGA1;nc|ENSG00000100083|Q9UJY5-2|GGA1;ENSG00000100083|ENST00000343632|GGA1;nc|ENSG00000100083|Q9UJY5-6|GGA1	nc|ENSG00000100083|Q9UJY5-4|GGA1	nc|ENSG00000100083|Q9UJY5-4|GGA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2522888183594	2	509.285069	1016.55558	0.66991	0.00034118	4.4041	0.0022429	5.074	0.0025841	509.28730314780483	23.667	0.60155	23.285	23.018	23.62	-0.38178					17	13	2	0	0	0	0.4196	1	1075	1075		44.531	12.576	1	64082			44815	1793	30035	30048	50741	50741					0.04796903608178127
QHGGQQSP	8	Unmodified	_QHGGQQSP_					0	0	0		nc|ENSG00000117713|O14497-2|ARID1A;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;ENSG00000049618|ENST00000636930|ARID1B	nc|ENSG00000117713|O14497-2|ARID1A	nc|ENSG00000117713|O14497-2|ARID1A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.77496337890625	2	419.693741	837.372929	1.5459	0.00064881	3.1862	0.0013372	4.7321	0.001986	419.6950328146859	42.569	2.9982	42.569	41.666	44.665	0.00016785					93	72	2	0	0	0	0.4196	1	3149	3149		37.159	14.117	1	110410			44816	2998	30036	30049	50742	50742					-0.05226275524421453
QHGLQEKKAQL	11	Unmodified	_QHGLQEKKAQL_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64490935-64514966:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.361083984375	2	640.359493	1278.70443	1.5852	0.0010151	-2.6843	-0.0017189	-1.099	-0.00070379	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.69248	1	10487	10487		32.751	3.5805	1	616450			44817	14756	30037	30050	50743	50743					0.07622964720439995
QHHSQRRLPWR	11	Unmodified	_QHHSQRRLPWR_					0	0	0		chr2:176105591-176118954|13|15.0|0.09|7.38|+|0|None,HOXD10|1	chr2:176105591-176118954|13|15.0|0.09|7.38|+|0|None,HOXD10|1	chr2:176105591-176118954|13|15.0|0.09|7.38|+|0|None,HOXD10|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.8006286621094	3	500.939625	1499.79705	0.30608	0.00015333	-1.1045	-0.00055327	-0.79839	-0.00039994	500.9392488496277	19.499	0.45741	18.869	18.711	19.168	-0.6296					16	9	2	0	0	0	0.18238	1	516	516		13.508	0.55046	1	119570			44818	317	30038	30051	50744	50744					0.0671390729714858
QHHSQRRLPWR	11	Unmodified	_QHHSQRRLPWR_					0	0	0		chr2:176105591-176118954|13|15.0|0.09|7.38|+|0|None,HOXD10|1	chr2:176105591-176118954|13|15.0|0.09|7.38|+|0|None,HOXD10|1	chr2:176105591-176118954|13|15.0|0.09|7.38|+|0|None,HOXD10|1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	500.939625	1499.79705	0.15613	7.8212E-05	-0.91503	-0.00045837	-0.7589	-0.00038016	500.93921443112475	19.383	0.50871	18.914	18.7	19.209	-0.46967	0.022162	0.00016334	NaN	13.508	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74722			44819	317	30038	30051							0.0671390729714858
QHISQPRLHQ	10	Unmodified	_QHISQPRLHQ_					0	0	0			REV__nc|ENSG00000007202|Q14667-2|BLTP2	REV__nc|ENSG00000007202|Q14667-2|BLTP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3346557617188	2	622.336353	1242.65815	-0.073789	-4.5921E-05	0.18042	0.00011228	0.10664	6.6363E-05	622.3363752507829	111.19	1.2568	111.19	110.57	111.83	0					110	41	4	0	0	0	0.86207	1	11545	11545		25.574	6.4705	1	190840	+		44820	16118	30039	30052	50745	50745					0.04652944608983489
QHKRKKKKEKK	11	Unmodified	_QHKRKKKKEKK_					0	0	0			REV__ENSG00000119720|ENST00000354366|NRDE2	REV__ENSG00000119720|ENST00000354366|NRDE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.65179443359375	3	489.319443	1464.9365	-0.80294	-0.0003929	-1.3896	-0.00067995	-2.1925	-0.0010729	489.31869096859845	16.472	0.55229	16.519	16.376	16.929	0.047802					62	24	4	0	0	0	0.86283	1	149	149		5.1424	1.931	1	902930	+		44821	18374	30040	30053	50746	50746					0.222628518618194
QHKRLHDKRIF	11	Unmodified	_QHKRLHDKRIF_					0	0	0			REV__nc|ENSG00000181220|Q6NUN9|ZNF746	REV__nc|ENSG00000181220|Q6NUN9|ZNF746	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.62298583984375	3	493.288143	1476.8426	0.16292	8.0368E-05	-3.2211	-0.0015889	-3.0582	-0.0015086	493.62092484877275	30.426	0.95694	30.538	30.206	31.163	0.11225					113	46	5	0	0	0	0.79224	1	1358	1358		12.957	2.8536	1	371460	+		44822	22446	30041	30054	50747	50747					0.12325132759519875
QHKSRPIGKL	10	Unmodified	_QHKSRPIGKL_					0	0	0			REV__ENST00000508510.5_1_4:76620044-76649314:-|nuORF	REV__ENST00000508510.5_1_4:76620044-76649314:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3558959960938	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.52	1	113.5	113	114	-0.024811								0	0	0	0.45132	1	12561	12561		27.882	0	1		+		44823	27927	30042	30055	50748	50748					0.11863607136797327
QHKWLTKLVV	10	Unmodified	_QHKWLTKLVV_					0	0	0			REV__nc|ENSG00000141867|O60885-2|BRD4	REV__nc|ENSG00000141867|O60885-2|BRD4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3787841796875	2	626.38224	1250.74993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.22	1	117.14	116.64	117.64	-0.082458								0	0	0	0.45132	1	12610	12610		24.519	2.5593	1		+		44824	19712	30043	30056	50749	50749					0.13458234973427352
QHLLQKQT	8	Unmodified	_QHLLQKQT_					0	0	0		nc|ENSG00000073282|Q9H3D4-8|TP63;nc|ENSG00000073282|Q9H3D4-4|TP63;nc|ENSG00000073282|Q9H3D4-10|TP63;nc|ENSG00000073282|Q9H3D4-7|TP63;nc|ENSG00000073282|Q9H3D4-3|TP63;nc|ENSG00000073282|Q9H3D4-12|TP63;nc|ENSG00000073282|Q9H3D4-2|TP63;nc|ENSG00000073282|Q9H3D4-9|TP63;nc|ENSG00000073282|Q9H3D4-11|TP63;ENSG00000073282|ENST00000264731|TP63	nc|ENSG00000073282|Q9H3D4-8|TP63	nc|ENSG00000073282|Q9H3D4-8|TP63	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.3036193847656	2	498.285266	994.555979	-1.0692	-0.00053279	-2.9311	-0.0014605	-4.0003	-0.0019933	498.2837126974095	31.655	1.6426	31.735	30.901	32.543	0.079834					63	37	3	0	0	0	0.4196	1	2211	2211		50.025	0	1	87729			44825	1290	30044	30057	50750	50750					0.05848278537382612
QHLLQKQT	8	Unmodified	_QHLLQKQT_					0	0	0		nc|ENSG00000073282|Q9H3D4-8|TP63;nc|ENSG00000073282|Q9H3D4-4|TP63;nc|ENSG00000073282|Q9H3D4-10|TP63;nc|ENSG00000073282|Q9H3D4-7|TP63;nc|ENSG00000073282|Q9H3D4-3|TP63;nc|ENSG00000073282|Q9H3D4-12|TP63;nc|ENSG00000073282|Q9H3D4-2|TP63;nc|ENSG00000073282|Q9H3D4-9|TP63;nc|ENSG00000073282|Q9H3D4-11|TP63;ENSG00000073282|ENST00000264731|TP63	nc|ENSG00000073282|Q9H3D4-8|TP63	nc|ENSG00000073282|Q9H3D4-8|TP63	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	498.285266	994.555979	0.17878	8.9082E-05	-8.3779	-0.0041746	-8.1992	-0.0040855	498.2824410149818	31.745	0.10218	31.857	31.816	31.918	0.11117	0.060693	-0.00054727	NaN	50.025	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36778			44826	1290	30044	30057							0.05848278537382612
QHLPALHS	8	Unmodified	_QHLPALHS_					0	0	0			REV__ENSG00000196531|ENST00000454682|NACA	REV__ENSG00000196531|ENST00000454682|NACA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.7781677246094	2	451.745776	901.477	1.3041	0.00058914	-1.311	-0.00059224	-0.0068612	-3.0995E-06	451.74512216693256	27.675	0.61219	27.42	27.152	27.765	-0.25465					23	13	2	0	0	0	0.4196	1	1615	1615		12.207	9.0476	1	226130	+		44827	23140	30045	30058	50751	50751					0.022320513030990696
QHLPVITRR	9	Unmodified	_QHLPVITRR_					0	0	0		ENST00000340541.4_1_18:9944981-9945035:+|nuORF	ENST00000340541.4_1_18:9944981-9945035:+|nuORF	ENST00000340541.4_1_18:9944981-9945035:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3421020507812	2	560.340907	1118.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.47	1	116.49	115.99	116.99	0.026466								0	0	0	0.3465	1	12796	12796		15.642	0	1				44828	10232	30046	30059	50752	50752					0.11267337965296065
QHLQQAFS	8	Unmodified	_QHLQQAFS_					0	0	0			REV__ENSG00000180921|ENST00000388913|FAM83H	REV__ENSG00000180921|ENST00000388913|FAM83H	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.738037109375	2	479.740691	957.466829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.099	1	29.13	28.63	29.63	0.030945								0	0	0	0.29631	1	1416	1416		25.45	1.2474	1		+		44829	22428	30047	30060	50753	50753					-0.013605564221506938
QHLRLAGG	8	Unmodified	_QHLRLAGG_					0	0	0			REV__ENST00000373954.10_1_1:28052521-28054029:+|nuORF	REV__ENST00000373954.10_1_1:28052521-28054029:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2455139160156	2	426.245944	850.477334	2.6022	0.0011092	-2.3558	-0.0010042	0.24641	0.00010503	426.2448505635507	87.493	3.3011	87.546	86.187	89.488	0.053024					131	77	2	0	0	0	0.89457	1	9033	9033		37.028	7.8789	1	4266000	+		44830	25777	30048	30061	50754	50754					0.0461147102294035
QHLSEYLVL	9	Unmodified	_QHLSEYLVL_					0	0	0		ENSG00000141252|ENST00000437048|VPS53;ENST00000576149.5_1_17:503295-579448:-|nuORF;nc|ENSG00000141252|Q5VIR6-2|VPS53;nc|ENSG00000141252|Q5VIR6-3|VPS53;nc|ENSG00000141252|Q5VIR6-1|VPS53	ENSG00000141252|ENST00000437048|VPS53	ENSG00000141252|ENST00000437048|VPS53	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	551.2985229492188	2	551.300581	1100.58661	-1.4835	-0.00081786	-2.2075	-0.001217	-3.691	-0.0020348	551.299268794571	32.001	0.65455	32.001	31.801	32.456	0					57	24	3	0	0	0	0.7932	1	1598	1598		25.45	0.93098	1	214540			44831	4484	30049	30062	50755	50755					0.04034012131751297
QHMLVIKMKGK	11	Unmodified	_QHMLVIKMKGK_					0	0	0			REV__ENST00000535812.1_1_12:66562688-66563015:-|nuORF	REV__ENST00000535812.1_1_12:66562688-66563015:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.25738525390625	3	438.257916	1311.75192	0.55491	0.00024319	-1.4324	-0.00062777	-0.87752	-0.00038458	438.25727820640566	29.88	1.2979	29.791	29.362	30.659	-0.089544					102	29	5	0	0	0	0.72374	1	2014	2014		27.644	0.59661	1	6394700	+		44832	28395	30050	30063	50756	50756					0.10851204395385139
QHPLRSKLEQ	10	Unmodified	_QHPLRSKLEQ_					0	0	0			REV__ENST00000247833.11_2_12:70149258-70149360:+|nuORF	REV__ENST00000247833.11_2_12:70149258-70149360:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.34619140625	2	618.346386	1234.67822	-0.1645	-0.00010172	-0.48965	-0.00030278	-0.65415	-0.00040449	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.8651	1	9998	9998		25.574	2.0514	1	511870	+		44833	24268	30051	30064	50757	50757					0.0702669554896147
QHPLYGTHA	9	Unmodified	_QHPLYGTHA_					0	0	0			REV__ENSG00000172869|ENST00000539542|DMXL1	REV__ENSG00000172869|ENST00000539542|DMXL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2540893554688	2	512.253966	1022.49338	-0.40094	-0.00020538	0.087759	4.4955E-05	-0.31318	-0.00016043	512.253883322564	54.419	1.295	54.474	54.011	55.305	0.055614					87	42	3	0	0	0	0.64922	1	4555	4555		44.117	5.0953	1	718970	+		44834	21860	30052	30065	50758	50758					-0.016968675308021375
QHPSRLLRL	9	Unmodified	_QHPSRLLRL_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3	REV__ENSG00000102753|ENST00000261667|KPNA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.34033203125	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.78058	1	11361	11361		30.504	6.3009	1	81463000	+		44835	17350	30053	30066	50759	50759					0.11267337965318802
QHPVIRAK	8	Unmodified	_QHPVIRAK_					0	0	0			REV__ENST00000307564.8_1_9:117099024-117099306:-|nuORF	REV__ENST00000307564.8_1_9:117099024-117099306:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.2773742675781	2	474.790518	947.566484	-0.63559	-0.00030177	-0.90269	-0.00042859	-1.5383	-0.00073036	474.7899923568577	22.529	0.37547	21.918	21.745	22.12	-0.6107					12	8	2	0	0	0	0.4196	1	914	914		40.573	0	1	55495	+		44836	24846	30054	30067	50760	50760					0.09060305982472983
QHQAVPVLP	9	Unmodified	_QHQAVPVLP_					0	0	0		ENST00000492143.5_1_7:148511147-148512007:-|nuORF;ENST00000478654.5_3_7:148511147-148512623:-|nuORF	ENST00000492143.5_1_7:148511147-148512007:-|nuORF	ENST00000492143.5_1_7:148511147-148512007:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.78021240234375	2	494.782359	987.550165	-0.78615	-0.00038897	-3.2604	-0.0016132	-4.0465	-0.0020021	494.78060020608814	86.18	3.7368	86.627	85.355	89.092	0.44736					160	91	3	0	0	0	0.7932	1	10010	10010		26.796	1.222	1	656610			44837	12396	30055	30068	50761	50761					0.05589180025708629
QHQPASAPP	9	Unmodified	_QHQPASAPP_					0	0	0		nc|ENSG00000168488|Q8WWM7-6|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;ENSG00000168488|ENST00000336783|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7346496582031	2	466.732866	931.451179	0.23559	0.00010996	2.6598	0.0012414	2.8953	0.0013514	466.7340279976939	23.781	0.81942	23.399	23.018	23.837	-0.38178					38	18	4	0	0	0	0.72402	1	1082	1082		38.806	3.1879	1	358980			44838	6405	30056	30069	50762	50762					-0.017288429392010585
QHRKRLQR	8	Unmodified	_QHRKRLQR_					0	0	0		nc|ENSG00000108523|Q9H6Y7-2|RNF167;ENSG00000108523|ENST00000262482|RNF167	nc|ENSG00000108523|Q9H6Y7-2|RNF167	nc|ENSG00000108523|Q9H6Y7-2|RNF167	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.343017578125	2	561.341772	1120.66899	0.44369	0.00024906	0.065122	3.6556E-05	0.50881	0.00028562	561.3416478757674	18.188	0.55705	17.567	17.21	17.767	-0.62141					26	12	3	0	0	0	0.87922	1	350	350		31.955	1.4512	1	200950			44839	2414	30057	30070	50763	50763					0.11348391773935873
QHRLWIVRGN	10	Unmodified	_QHRLWIVRGN_					0	0	0			REV__chr4:87657079-87659220|46|332.91|0.04|13.1|+|1|DMP1,DMP1|1	REV__chr4:87657079-87659220|46|332.91|0.04|13.1|+|1|DMP1,DMP1|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	639.3612670898438	2	639.862538	1277.71052	1.5744	0.0010074	1.195	0.00076465	2.7694	0.001772	639.863276242505	110.7	0.25691	110.73	110.56	110.82	0.031746					9	5	2	0	0	0	0.37624	1	12126	12126		14.865	2.0532	1	82996	+		44840	15841	30058	30071	50764	50764					0.08277527742620805
QHRRNRRRRKP	11	Unmodified	_QHRRNRRRRKP_					0	0	0		chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS;nc|ENSG00000087460|Q5JWF2-3|GNAS;ENST00000464624.6_1_20:57428320-57466719:+|nuORF;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS	chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS	nc|ENSG00000087460|Q5JWF2-2|GNAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	520.6507568359375	3	520.649068	1558.92537	-0.19327	-0.00010063	1.5953	0.00083061	1.4021	0.00072998	520.6498187835778	108.9	1.3116	109.03	108.21	109.52	0.13026					69	41	2	0	0	0	0.89215	1	11685	11685		3.2113	0	1	2987300			44841	368;14794	30059	30072	50765	50765					0.168268873308989
QHRRRSRSRSK	11	Unmodified	_QHRRRSRSRSK_					0	0	0			REV__ENSG00000117616|ENST00000243189|RSRP1	REV__ENSG00000117616|ENST00000243189|RSRP1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	485.28668212890625	3	485.282162	1452.82466	-1.4434	-0.00070046	-0.25201	-0.0001223	-1.6954	-0.00082276	485.61698671357385	58.495	1.2171	58.495	57.989	59.206	0					123	53	3	0	0	0	0.17586	1	5064	5064		8.0344	0	1	108050	+		44842	18273	30060	30073	50766	50766					0.11635810557390869
QHSPTSYWAE	10	Unmodified	_QHSPTSYWAE_					0	0	0		chr17:28856391-28858964|23|19.43|0.15|7.0|+|1|ERAL1,ERAL1|1;ENST00000254928.9_1_17:27183311-27184957:+|nuORF	chr17:28856391-28858964|23|19.43|0.15|7.0|+|1|ERAL1,ERAL1|1	chr17:28856391-28858964|23|19.43|0.15|7.0|+|1|ERAL1,ERAL1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	603.2651977539062	2	603.264727	1204.5149	-0.5684	-0.0003429	-2.7458	-0.0016565	-3.3143	-0.0019994	603.2629982026436	26.081	2.5205	26.049	25.031	27.552	-0.032125					87	66	2	0	0	0	0.85694	1	1107	1107		21.96	1.9631	1	26577			44843	222	30061	30074	50767	50767					-0.07917527292738669
QHTKVHKSLH	10	Unmodified	_QHTKVHKSLH_					0	0	0			REV__ENSG00000105866|ENST00000222584|SP4	REV__ENSG00000105866|ENST00000222584|SP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.56427001953125	3	405.563273	1213.66799	1.3715	0.00055625	2.1986	0.00089169	3.5702	0.0014479	405.5640303977856	59.974	1.644	60.007	59.019	60.663	0.032822					112	41	3	0	0	0	0.85466	1	5571	5571		20.03	0	1	297440	+		44844	17577	30062	30075	50768	50768					0.06970132614378599
QHTLLAPQN	9	Unmodified	_QHTLLAPQN_					0	0	0			REV__nc|ENSG00000160584|Q9Y2K2-7|SIK3	REV__nc|ENSG00000160584|Q9Y2K2-7|SIK3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.5392150878906	2	511.274898	1020.53524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.429	1	69.429	68.929	69.929	0								0	0	0	0.31738	1	6188	6188		24.519	1.4767	1		+		44845	20724	30063	30076	50769	50769					0.025796881576980013
QHTQIVIRF	9	Unmodified	_QHTQIVIRF_					0	0	0			REV__ENSG00000158553|ENST00000444565|POM121L2	REV__ENSG00000158553|ENST00000444565|POM121L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.3314819335938	2	571.327465	1140.64038	2.9117	0.0016635	3.1782	0.0018158	6.0899	0.0034793	571.3292778918316	102.35	2.3075	102.31	101.49	103.8	-0.047005					131	55	4	0	0	0	0.76764	1	11165	11165		34.173	6.2903	1	2404800	+		44846	20612	30064	30077	50770	50770					0.07568229354114919
QHVPLLKK	8	Unmodified	_QHVPLLKK_					0	0	0		ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.8109130859375	2	481.810919	961.607286	-0.63948	-0.00030811	1.0703	0.00051569	0.43083	0.00020758	481.81105254343703	30.272	0.70796	30.3	30.008	30.716	0.028618					25	15	3	0	0	0	0.91005	1	1971	1971		42.474	1.6963	1	224660			44847	4717	30065	30078	50771	50771					0.12494647302094108
QHVQIRVAR	9	Unmodified	_QHVQIRVAR_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1;ENST00000447863.5_1_7:86811523-86824453:+|nuORF;ENST00000580803.1_1_7:86817463-86822708:+|nuORF;ENST00000425406.5_1_7:86817376-86824453:+|nuORF;ENST00000547146.6_1_7:86813892-86824453:+|nuORF	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8302612304688	2	553.830706	1105.64686	-1.4397	-0.00079733	0.48085	0.00026631	-0.95882	-0.00053102	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.78536	1	9171	9171		29.15	4.9468	1	5453100			44848	3990	30066	30079	50772	50772					0.09826167305527633
QHVQSGLL	8	Unmodified	_QHVQSGLL_					0	0	0			REV__ENSG00000145014|ENST00000347147|TMEM44	REV__ENSG00000145014|ENST00000347147|TMEM44	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.2635803222656	2	441.245609	880.476666	1.0224	0.00045112	-0.49536	-0.00021858	0.52701	0.00023254	441.24524073514874	23.247	0.80435	22.673	22.29	23.094	-0.57415					33	19	2	0	0	0	0.4196	1	987	987		18.324	0	1	243520	+		44849	19921	30067	30080	50773	50773					0.03164631583240407
QHVTTLRETKA	11	Unmodified	_QHVTTLRETKA_					0	0	0		nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1;ENSG00000198901|ENST00000394249|PRC1;chr15:90981661-90981748|17|17.88|0.04|8.92|-|0|None,PRC1|1;ENST00000417173.6_1_15:91524704-91537723:-|nuORF	nc|ENSG00000198901|O43663-3|PRC1	nc|ENSG00000198901|O43663-3|PRC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3617553710938	2	642.356951	1282.69935	7.1578	0.0045978	0.90714	0.00058271	8.0649	0.0051806	642.357698090965	112.58	0.75734	112.61	112.29	113.05	0.032707					52	25	4	0	0	0	0.732	1	13643	13643		26.063	6.9599	1	69953			44850	8364	30068	30081	50774	50774					0.06930660857779003
QHWLTVLAQH	10	Unmodified	_QHWLTVLAQH_					0	0	0			REV__nc|ENSG00000178209|Q15149-7|PLEC	REV__nc|ENSG00000178209|Q15149-7|PLEC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.1755065917969	3	411.556007	1231.64619	0.25266	0.00010398	-3.1236	-0.0012855	-2.8709	-0.0011815	411.8901869270388	95.069	0.11651	95.489	95.393	95.509	0.41964					4	2	2	0	0	0	0.37624	1	11400	11400		63.534	0	1	34435	+		44851	22265	30069	30082	50775	50775					0.039633278657674964
QIAFIQKEL	9	Unmodified	_QIAFIQKEL_					0	0	0			REV__nc|ENSG00000108506|Q9H0H0|INTS2	REV__nc|ENSG00000108506|Q9H0H0|INTS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.316162109375	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.75725	1	10299	10299		36.447	0.82846	1	4868200	+		44852	17714	30070	30083	50776	50776					0.08222889028479585
QIAKGTKTNGG	11	Unmodified	_QIAKGTKTNGG_					0	0	0			REV__nc|ENSG00000124749|Q96P44-3|COL21A1	REV__nc|ENSG00000124749|Q96P44-3|COL21A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.8013305664062	2	537.798737	1073.58292	-0.31613	-0.00017001	4.0382	0.0021717	3.722	0.0020017	537.8006138106188	19.034	0.52099	18.405	18.19	18.711	-0.6296					20	11	3	0	0	0	0.7144	1	481	481		29.17	1.2878	1	132070	+		44853	18608	30071	30084	50777	50777					0.04907342357910238
QIAKLMVELSK	11	Unmodified	_QIAKLMVELSK_					0	0	0		ENST00000508451.1_1_5:10250422-10254994:+|nuORF;ENSG00000150753|ENST00000280326|CCT5	ENST00000508451.1_1_5:10250422-10254994:+|nuORF	ENST00000508451.1_1_5:10250422-10254994:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.57537841796875	3	420.584574	1258.73189	-0.21043	-8.8503E-05	-1.2571	-0.00052872	-1.4675	-0.00061722	420.58381045736667	45.386	1.4219	45.849	44.945	46.367	0.46313					53	34	2	0	0	0	0.1728	1	4225	4225		8.0344	5.6453	1	285880			44854	5081	30072	30085	50778	50778					0.11287731936431555
QIASFILLR	9	Unmodified	_QIASFILLR_					0	0	0		ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8297729492188	2	530.829309	1059.64407	-0.18777	-9.9676E-05	0.36027	0.00019124	0.17249	9.1564E-05	530.8293441521571	73.718	1.5584	74.106	73.797	75.355	0.38779					86	39	4	0	0	0	0.024351	5	8269	8261;8269;8278;8289;8301		122.18	42.725	1	3955200			44855	3880	30073	30086	50779;50780;50781;50782;50783	50780					0.11662899127986748
QIASFILLR	9	Unmodified	_QIASFILLR_					0	0	0		ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8289794921875	2	530.829309	1059.64407	0.021812	1.1578E-05	0.13517	7.1752E-05	0.15698	8.3331E-05	530.8292322958819	73.53	0.92635	74.084	73.827	74.753	0.55386					71	26	4	0	0	0	0.0080651	6	8295	8273;8281;8295;8305;8318;8330		134.81	35.436	1	4646000			44856	3880	30073	30086	50784;50785;50786;50787;50788;50789	50786					0.11662899127986748
QIASFILLRL	10	Unmodified	_QIASFILLRL_					0	0	0		ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.370361328125	2	587.371341	1172.72813	0.44494	0.00026135	-0.41963	-0.00024648	0.025308	1.4865E-05	587.3709316988227	90.094	1.0743	90.545	90.308	91.382	0.45058					57	26	3	0	0	0	0.16188	1	10671	10671		93.598	29.39	1	613160			44857	3880	30074	30087	50790	50790					0.1486743022489918
QIAVFFYFKRT	11	Unmodified	_QIAVFFYFKRT_					0	0	0			REV__ENSG00000134538|ENST00000256958|SLCO1B1	REV__ENSG00000134538|ENST00000256958|SLCO1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.93218994140625	3	473.930962	1418.77106	0.68533	0.0003248	1.8178	0.00086149	2.5031	0.0011863	473.93169135605365	15.923	0.18167	15.899	15.799	15.981	-0.024035					10	6	2	0	0	0	0.74771	1	93	93		22.562	2.2466	1	61262	+		44858	19149	30075	30088	50791	50791					0.07842200282289014
QIAVNTLH	8	Unmodified	_QIAVNTLH_					0	0	0			REV__nc|ENSG00000100271|O95922-4|TTLL1	REV__nc|ENSG00000100271|O95922-4|TTLL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.30804443359375	2	448.253434	894.492316	0.92302	0.00041375	3.9195	0.0017569	4.8425	0.0021707	448.25398085743615	81.365	0.59593	81.422	81.04	81.636	0.057808					18	13	2	0	0	0	0.4196	1	8053	8053		30.504	0	1	47019	+		44859	17161	30076	30089	50792	50792					0.04084918100284085
QICKVLIG	8	Unmodified	_QICKVLIG_					0	0	0			REV__nc|ENSG00000079263|Q13342-3|SP140	REV__nc|ENSG00000079263|Q13342-3|SP140	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26617431640625	2	437.264956	872.515359	1.7902	0.0007828	0.24809	0.00010848	2.0383	0.00089128	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.89457	1	772	772		37.028	0	1	738160	+		44860	16778	30077	30090	50793	50793					0.07400220893396181
QICPKRCVC	9	Unmodified	_QICPKRCVC_					0	0	0		ENSG00000165379|ENST00000298119|LRFN5	ENSG00000165379|ENST00000298119|LRFN5	ENSG00000165379|ENST00000298119|LRFN5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.2543334960938	2	525.256282	1048.49801	-1.1412	-0.00059945	-2.9521	-0.0015506	-4.0933	-0.00215	525.2546040568645	38.032	0.90385	38.043	37.724	38.627	0.011173					34	20	3	0	0	0	0.77546	1	2582	2582		31.955	1.6371	1	192990			44861	6078	30078	30091	50794	50794					-0.02429765975580267
QIDILLLV	8	Unmodified	_QIDILLLV_					0	0	0			REV__nc|ENSG00000197959|Q9UQ16-5|DNM3	REV__nc|ENSG00000197959|Q9UQ16-5|DNM3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80059814453125	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.7961	1	3359	3359		17.365	0	1	279560	+		44862	15428	30079	30092	50795	50795					0.11905003113815837
QIEFIKAIK	9	Unmodified	_QIEFIKAIK_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.316650390625	2	545.336967	1088.65938	2.148	0.0011714	4.3559	0.0023754	6.5039	0.0035468	545.3392343532324	90.022	0.2178	89.952	89.786	90.004	-0.069977					7	4	2	0	0	0	0.20789	1	9406	9406		31.53	2.3803	1	37580	+		44863	20160	30080	30093	50796	50796					0.11859765925169086
QIEKQKQTG	9	Unmodified	_QIEKQKQTG_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2931518554688	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.68711	2	8810	8810;8986		41.427	4.9799	1	1390700	+		44864	23043	30081	30094	50797;50798	50797					0.04507939983614051
QIEKQKQTG	9	Unmodified	_QIEKQKQTG_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2933349609375	2	530.293288	1058.57202	-0.034361	-1.8221E-05	0.31371	0.00016636	0.27935	0.00014814	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.68711	2	9367	9306;9367		41.427	9.8968	1	1852900	+		44865	23043	30081	30094	50799;50800	50800					0.04507939983614051
QIEKQKQTG	9	Unmodified	_QIEKQKQTG_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2933959960938	2	530.293288	1058.57202	2.0317	0.0010774	-1.9029	-0.0010091	0.12876	6.828E-05	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.64555	4	9529	9432;9444;9492;9529		44.377	5.1244	1	1811300	+		44866	23043	30081	30094	50801;50802;50803;50804	50804					0.04507939983614051
QIEKQKQTG	9	Unmodified	_QIEKQKQTG_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.293212890625	2	530.293288	1058.57202	-0.066725	-3.5384E-05	0.20402	0.00010819	0.1373	7.2808E-05	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.66686	4	9205	9055;9067;9193;9205		42.864	7.246	1	2084800	+		44867	23043	30081	30094	50805;50806;50807;50808	50808					0.04507939983614051
QIEKQKQTG	9	Unmodified	_QIEKQKQTG_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2935180664062	2	530.293288	1058.57202	0.74166	0.0003933	-0.55232	-0.00029289	0.18935	0.00010041	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.68711	3	9088	9088;9100;9148		41.427	0	1	2081200	+		44868	23043	30081	30094	50809;50810;50811	50809					0.04507939983614051
QIEKQKQTG	9	Unmodified	_QIEKQKQTG_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.293212890625	2	530.293288	1058.57202	-1.5163	-0.00080409	1.7205	0.00091237	0.2042	0.00010828	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.6204	1	9084	9084		45.972	3.5761	1	1686700	+		44869	23043	30081	30094	50812	50812					0.04507939983614051
QIEKQKQTG	9	Unmodified	_QIEKQKQTG_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2933959960938	2	530.293288	1058.57202	1.6334	0.0008662	-1.7145	-0.0009092	-0.081076	-4.2994E-05	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.76419	2	10652	10652;10809		35.152	2.3396	1	1816400	+		44870	23043	30081	30094	50813;50814	50813					0.04507939983614051
QIESARQR	8	Unmodified	_QIESARQR_					0	0	0			REV__nc|ENSG00000133816|O94851|MICAL2	REV__nc|ENSG00000133816|O94851|MICAL2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.30084228515625	2	494.270147	986.525741	-0.82762	-0.00040907	-2.078	-0.0010271	-2.9056	-0.0014362	494.26967897095625	97.617	0.3389	97.617	97.552	97.891	0					12	7	2	0	0	0	0.4196	1	9796	9796		40.778	13.982	1	232180	+		44871	29854	30082	30095	50815	50815					0.0319391987218296
QIEVPTLPITK	11	Unmodified	_QIEVPTLPITK_					0	0	0			REV__ENSG00000104998|ENST00000263379|IL27RA	REV__ENSG00000104998|ENST00000263379|IL27RA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8695068359375	2	619.871371	1237.72819	1.2588	0.00078029	-4.0214	-0.0024927	-2.7626	-0.0017124	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.6493	1	11503	11503		38.754	3.1353	1	4742500	+		44872	17500	30083	30096	50816	50816					0.11883385434202864
QIEYKKELAM	10	Unmodified	_QIEYKKELAM_					0	0	0			REV__chr13:35838201-35839092|15|18.13|0.06|8.29|-|0|None,DCLK1|1	REV__chr13:35838201-35839092|15|18.13|0.06|8.29|-|0|None,DCLK1|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.9223937988281	3	418.225046	1251.65331	2.7169	0.0011363	-2.3914	-0.0010001	0.3255	0.00013613	418.2241429580748	105.9	0.11715	105.87	105.78	105.9	-0.03714					4	2	2	0	0	0	0.37624	1	11686	11686		30.569	1.0181	1	61201	+		44873	15568	30084	30097	50817	50817					0.03754879631355834
QIFERIKRK	9	Unmodified	_QIFERIKRK_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.5875549316406	3	406.587418	1216.74043	2.8188	0.0011461	-2.2251	-0.00090468	0.5937	0.00024139	406.58643454203246	24.703	1.6586	24.666	24.201	25.86	-0.037178					110	42	4	0	0	0	0.76419	1	894	894		35.152	5.982	1	337090	+		44874	19317	30085	30098	50818	50818					0.1407246668791231
QIFKPIISK	9	Unmodified	_QIFKPIISK_					0	0	0		nc|ENSG00000196591|Q92769-3|HDAC2;ENSG00000196591|ENST00000519065|HDAC2	nc|ENSG00000196591|Q92769-3|HDAC2	nc|ENSG00000196591|Q92769-3|HDAC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.3390502929688	2	537.33951	1072.66447	-1.4822	-0.00079643	0.76431	0.00041069	-0.71786	-0.00038574	537.3396810647548	42.797	0.57951	43.23	43.006	43.586	0.4334					28	13	3	0	0	0	0.24527	1	3837	3837		69.628	21.97	1	1109900			44875	8079	30086	30099	50819	50819					0.13104069787800654
QIFKPIISK	9	Unmodified	_QIFKPIISK_					0	0	0		nc|ENSG00000196591|Q92769-3|HDAC2;ENSG00000196591|ENST00000519065|HDAC2	nc|ENSG00000196591|Q92769-3|HDAC2	nc|ENSG00000196591|Q92769-3|HDAC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.3377075195312	2	537.33951	1072.66447	-2.2608	-0.0012148	1.5235	0.00081865	-0.73727	-0.00039617	537.3401075411575	42.643	0.58041	43.341	43.052	43.632	0.69754					27	13	4	0	0	0	0.076066	1	3820	3820		98.582	18.869	1	967700			44876	8079	30086	30099	50820	50820					0.13104069787800654
QIFKVLPK	8	Unmodified	_QIFKVLPK_					0	0	0			REV__ENST00000477798.5_1_3:33840175-33866683:+|nuORF	REV__ENST00000477798.5_1_3:33840175-33866683:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.8137512207031	2	486.81567	971.616788	-0.21818	-0.00010621	-4.336	-0.0021108	-4.5542	-0.002217	486.8134859363653	32.309	0.98692	32.435	32.073	33.06	0.12642					70	22	5	0	0	0	0.92457	1	2291	2291		47.916	0.25827	1	4653700	+		44877	21639	30087	30100	50821	50821					0.12984415587595777
QIFLPRVAGKL	11	Unmodified	_QIFLPRVAGKL_					0	0	0		ENST00000477457.1_1_2:238455116-238462232:+|nuORF	ENST00000477457.1_1_2:238455116-238462232:+|nuORF	ENST00000477457.1_1_2:238455116-238462232:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3925170898438	2	621.390065	1240.76558	0.9213	0.00057249	3.1806	0.0019764	4.1019	0.0025489	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.6921	1	11105	11105		32.812	3.6424	1	22352000			44878	12356	30088	30101	50822	50822					0.15482521490503132
QIFNGTFVK	9	Unmodified	_QIFNGTFVK_					0	0	0		ENSG00000147604|ENST00000352983|RPL7;ENST00000461190.1_1_3:123871117-123871351:-|nuORF;ENST00000600588.1_1_19:6593418-6593715:+|nuORF;ENST00000397636.2_1_7:99737498-99738123:-|nuORF	ENSG00000147604|ENST00000352983|RPL7	ENSG00000147604|ENST00000352983|RPL7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.2900390625	2	527.290017	1052.56548	0.63153	0.000333	-0.86832	-0.00045785	-0.23678	-0.00012485	527.2894037871584	53.195	0.78617	53.609	53.332	54.119	0.4139					38	18	3	0	0	0	0.36616	1	5365	5365		60.118	4.6141	1	995190			44879	4914	30089	30102	50823	50823					0.04130046822888289
QIFNGTFVK	9	Unmodified	_QIFNGTFVK_					0	0	0		ENSG00000147604|ENST00000352983|RPL7;ENST00000461190.1_1_3:123871117-123871351:-|nuORF;ENST00000600588.1_1_19:6593418-6593715:+|nuORF;ENST00000397636.2_1_7:99737498-99738123:-|nuORF	ENSG00000147604|ENST00000352983|RPL7	ENSG00000147604|ENST00000352983|RPL7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.2901611328125	2	527.290017	1052.56548	0.03769	1.9874E-05	-0.23929	-0.00012617	-0.2016	-0.0001063	527.289714141244	52.998	0.5777	53.612	53.324	53.902	0.61436					31	13	3	0	0	0	0.48102	1	5348	5348		52.937	2.9122	1	1020800			44880	4914	30089	30102	50824	50824					0.04130046822888289
QIFPHVVHG	9	Unmodified	_QIFPHVVHG_					0	0	0		nc|ENSG00000142186|Q96KG9-6|SCYL1;nc|ENSG00000142186|Q96KG9-4|SCYL1;ENSG00000142186|ENST00000270176|SCYL1;nc|ENSG00000142186|Q96KG9-5|SCYL1;nc|ENSG00000142186|Q96KG9-3|SCYL1;nc|ENSG00000142186|Q96KG9-2|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7931518554688	2	517.282526	1032.5505	-0.047156	-2.4393E-05	-0.82331	-0.00042588	-0.87046	-0.00045028	517.2820542468112	87.916	0.60684	87.984	87.745	88.352	0.067711					21	13	2	0	0	0	0.20789	1	8928	8928		24.203	0	1	101840			44881	14969	30090	30103	50825	50825					0.03552599745557927
QIFVKRFHRWL	11	Unmodified	_QIFVKRFHRWL_					0	0	0			REV__ENST00000563230.1_1_16:79123974-79135149:+|nuORF	REV__ENST00000563230.1_1_16:79123974-79135149:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.6329650878906	3	510.63325	1528.87792	4.1352	0.0021116	-0.13742	-7.017E-05	3.9978	0.0020414	510.96644639342924	104.18	2.2061	104.41	103.8	106.01	0.22783					165	53	5	0	0	0	0.79224	1	12699	12699		12.957	4.1582	1	454800	+		44882	28815	30091	30104	50826	50826					0.1346379528736179
QIFVKTLTGK	10	Unmodified	_QIFVKTLTGK_					0	0	0		ENSG00000221983|ENST00000442744|UBA52;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENSG00000143947|ENST00000272317|RPS27A;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENSG00000170315|ENST00000302182|UBB;ENSG00000150991|ENST00000339647|UBC;ENST00000463185.1_1_2:55459960-55460026:+|nuORF;ENST00000471772.6_1_2:55459960-55460558:+|nuORF;ENST00000598814.1_1_19:18682694-18684218:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENSG00000221983|ENST00000442744|UBA52	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.8412475585938	2	567.847699	1133.68084	-1.375	-0.00078077	0.36842	0.00020921	-1.0065	-0.00057156	567.8479626989358	42.517	1.5658	42.95	42.183	43.749	0.4334					98	38	5	0	0	0	0.19099	2	3811	3799;3811		88.177	22.712	1	10047000			44883	8691;12378	30092	30105	50827;50828	50828					0.1193515095390012
QIFVKTLTGK	10	Unmodified	_QIFVKTLTGK_					0	0	0		ENSG00000221983|ENST00000442744|UBA52;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENSG00000143947|ENST00000272317|RPS27A;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENSG00000170315|ENST00000302182|UBB;ENSG00000150991|ENST00000339647|UBC;ENST00000463185.1_1_2:55459960-55460026:+|nuORF;ENST00000471772.6_1_2:55459960-55460558:+|nuORF;ENST00000598814.1_1_19:18682694-18684218:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENSG00000221983|ENST00000442744|UBA52	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.8432006835938	2	567.847699	1133.68084	-0.92964	-0.0005279	0.0093882	5.3311E-06	-0.92026	-0.00052256	567.8477872055079	42.347	0.97988	43.045	42.731	43.711	0.69754					78	23	4	0	0	0	0.045977	1	3787	3787		109.48	24.318	1	10351000			44884	8691;12378	30092	30105	50829	50829					0.1193515095390012
QIGDAYSNSDK	11	Unmodified	_QIGDAYSNSDK_					0	0	0		ENSG00000176971|ENST00000318627|FIBIN	ENSG00000176971|ENST00000318627|FIBIN	ENSG00000176971|ENST00000318627|FIBIN	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	599.2791748046875	2	599.272749	1196.53095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.198	1	22.779	22.279	23.279	-0.41879								0	0	0	0.56276	1	1006	1006		29.551	2.5034	1				44885	7107	30093	30106	50830	50830					-0.05945865846547349
QIGIRLINRQ	10	Unmodified	_QIGIRLINRQ_					0	0	0			REV__ENSG00000109911|ENST00000640961|ELP4	REV__ENSG00000109911|ENST00000640961|ELP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.8720092773438	2	605.872571	1209.73059	-1.2702	-0.00076958	0.43018	0.00026063	-0.84002	-0.00050895	605.8726634233227	100.16	1.4911	100.34	99.884	101.38	0.17199					100	34	4	0	0	0	0.86718	1	10429	10429		27.882	8.7787	1	739750	+		44886	17779	30094	30107	50831	50831					0.13411278682542616
QIGLFIPVKTR	11	Unmodified	_QIGLFIPVKTR_					0	0	0			REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	636.4004516601562	2	636.395348	1270.77614	1.4181	0.00090245	2.5732	0.0016376	3.9913	0.00254	636.3968876400421	101.52	0.88153	101.56	101.3	102.18	0.044823					40	20	3	0	0	0	0.72106	1	10981	10981		28.081	2.5074	1	385150	+		44887	19327	30095	30108	50832	50832					0.1515850414491524
QIGLFIPVKTR	11	Unmodified	_QIGLFIPVKTR_					0	0	0			REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	636.395348	1270.77614	-0.01464	-9.3171E-06	2.9395	0.0018707	2.9248	0.0018614	636.3974001587258	101.99	0.74551	101.99	101.57	102.32	0	0.30736	-0.00025671	NaN	28.081	40	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	242290	+		44888	19327	30095	30108							0.1515850414491524
QIGLFIPVKTR	11	Unmodified	_QIGLFIPVKTR_					0	0	0			REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	636.395348	1270.77614	-0.11445	-7.2836E-05	0.22749	0.00014477	0.11304	7.1937E-05	636.3937329484951	101.75	1.2384	101.77	101.52	102.76	0.01989	0.085466	-0.0037085	NaN	28.081	53	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	456850	+		44889	19327	30095	30108							0.1515850414491524
QIGLFIPVKTR	11	Unmodified	_QIGLFIPVKTR_					0	0	0			REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	636.395348	1270.77614	2.7247	0.001734	-2.7917	-0.0017766	-0.066987	-4.263E-05	636.3917086972409	101.64	1.2104	101.59	101.36	102.57	-0.049835	-0.093041	-0.0075513	NaN	28.081	51	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	337560	+		44890	19327	30095	30108							0.1515850414491524
QIGLFIPVKTR	11	Unmodified	_QIGLFIPVKTR_					0	0	0			REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	636.395348	1270.77614	1.4181	0.00090245	2.5732	0.0016376	3.9913	0.00254	636.3968876400421	101.52	0.88153	101.56	101.3	102.18	0.044823	-0.12198	-0.00072288	NaN	28.081	40	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	385150	+		44891	19327	30095	30108							0.1515850414491524
QIGLFIPVKTR	11	Unmodified	_QIGLFIPVKTR_					0	0	0			REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	636.395348	1270.77614	1.5204	0.0009676	1.9126	0.0012171	3.433	0.0021847	636.3962715564577	101.39	0.58527	101.6	101.4	101.98	0.2058	-0.084979	-0.0015638	NaN	28.081	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	264130	+		44892	19327	30095	30108							0.1515850414491524
QIGLFIPVKTR	11	Unmodified	_QIGLFIPVKTR_					0	0	0			REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	REV__nc|ENSG00000136697|Q8WWZ1-2|IL1F10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	636.395348	1270.77614	0.93601	0.00059567	3.1061	0.0019767	4.0421	0.0025724	636.3970599598815	101.53	0.62239	101.67	101.45	102.07	0.14169	-0.01429	-4.4687E-05	NaN	28.081	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	270420	+		44893	19327	30095	30108							0.1515850414491524
QIGTPCHG	8	Unmodified	_QIGTPCHG_					0	0	0			REV__ENST00000535424.5_1_16:71962217-71962331:+|nuORF	REV__ENST00000535424.5_1_16:71962217-71962331:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.6881103515625	2	406.689613	811.364672	0.28379	0.00011541	-3.914	-0.0015918	-3.6302	-0.0014764	406.68799140261245	28.549	0.68845	28.585	28.255	28.944	0.03607					36	23	2	0	0	0	0.91005	1	1359	1359		42.474	5.3154	1	63299	+		44894	28387	30096	30109	50833	50833					-0.048555457654060774
QIHLIKERFV	10	Unmodified	_QIHLIKERFV_					0	0	0			REV__nc|ENSG00000107201|O95786-2|RIGI	REV__nc|ENSG00000107201|O95786-2|RIGI	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8822631835938	2	641.885147	1281.75574	-1.1529	-0.00074004	-3.1	-0.0019899	-4.2529	-0.0027299	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.86763	1	9951	9951		26.693	1.1189	1	3521600	+		44895	17650	30097	30110	50834	50834					0.1261333348509197
QIHLNTTHTH	10	Unmodified	_QIHLNTTHTH_					0	0	0			REV__ENST00000379589.3_1_13:39917692-39917869:-|nuORF	REV__ENST00000379589.3_1_13:39917692-39917869:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	601.3089599609375	2	601.307261	1200.59997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.285	1	72.365	71.865	72.865	0.080032								0	0	0	0.45132	1	6591	6591		28.081	3.5623	1		+		44896	25924	30098	30111	50835	50835					0.0076926296369492775
QIHSMIARICP	11	Unmodified	_QIHSMIARICP_					0	0	0		ENSG00000075223|ENST00000265361|SEMA3C;nc|ENSG00000075223|Q99985-2|SEMA3C;ENST00000458729.5_1_7:80422797-80546000:-|nuORF	ENSG00000075223|ENST00000265361|SEMA3C	ENSG00000075223|ENST00000265361|SEMA3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8333740234375	2	634.833743	1267.65293	1.3245	0.00084084	-1.5729	-0.00099852	-0.24837	-0.00015767	634.8325268339341	18.782	0.3438	18.153	17.975	18.319	-0.6296					17	7	3	0	0	0	0.53361	1	437	437		49.536	8.1094	1	63903			44897	1324	30099	30112	50836	50836					0.029811814305048756
QIIDQDKH	8	Unmodified	_QIIDQDKH_					0	0	0		nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1;ENSG00000104067|ENST00000614355|TJP1	nc|ENSG00000104067|Q07157-2|TJP1	nc|ENSG00000104067|Q07157-2|TJP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.7596740722656	2	498.759081	995.503609	-1.5033	-0.0007498	0.80428	0.00040114	-0.69905	-0.00034866	498.7593715396186	47.778	0.57496	48.247	47.971	48.546	0.46941					32	14	3	0	0	0	0.42407	1	4575	4575		79.451	7.5735	1	922380			44898	2113	30100	30113	50837	50837					0.005676954037539872
QIIHIYDKI	9	Unmodified	_QIIHIYDKI_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.83251953125	2	571.832049	1141.64954	0.65309	0.00037346	-0.56066	-0.0003206	0.092423	5.2851E-05	571.831622562202	76.36	0.70596	76.493	76.172	76.878	0.13325					61	24	4	0	0	0	0.28163	1	7160	7160		66.429	6.311	1	512960	+		44899	30102	30101	30114	50838	50838					0.08438577919810086
QIIKKYKSMV	10	Unmodified	_QIIKKYKSMV_					0	0	0			REV__L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|29|1|sense	REV__L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|29|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.3724365234375	2	619.370484	1236.72641	2.9405	0.0018212	0.1384	8.572E-05	3.0789	0.001907	619.3710459342678	101.7	2.0362	101.65	101.12	103.16	-0.049828					124	48	5	0	0	0	0.8505	1	11130	11130		19.104	1.6355	1	3045300	+		44900	29462	30102	30115	50839	50839					0.11752053144618912
QIILISVP	8	Unmodified	_QIILISVP_					0	0	0		ENST00000228506.7_1_12:121134956-121135184:+|nuORF	ENST00000228506.7_1_12:121134956-121135184:+|nuORF	ENST00000228506.7_1_12:121134956-121135184:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78790283203125	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.85277	3	2800	2788;2800;2812		33.516	0	1	15753000			44901	9204	30103	30116	50840;50841;50842	50841					0.11308733942325944
QIILISVP	8	Unmodified	_QIILISVP_					0	0	0		ENST00000228506.7_1_12:121134956-121135184:+|nuORF	ENST00000228506.7_1_12:121134956-121135184:+|nuORF	ENST00000228506.7_1_12:121134956-121135184:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879638671875	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.85277	2	2802	2802;2839		25.45	0	1	14534000			44902	9204	30103	30116	50843;50844	50843					0.11308733942325944
QIILISVP	8	Unmodified	_QIILISVP_					0	0	0		ENST00000228506.7_1_12:121134956-121135184:+|nuORF	ENST00000228506.7_1_12:121134956-121135184:+|nuORF	ENST00000228506.7_1_12:121134956-121135184:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7879943847656	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.85277	3	2419	2419;2432;2454		42.474	8.9589	1	12467000			44903	9204	30103	30116	50845;50846;50847	50845					0.11308733942325944
QIILISVP	8	Unmodified	_QIILISVP_					0	0	0		ENST00000228506.7_1_12:121134956-121135184:+|nuORF	ENST00000228506.7_1_12:121134956-121135184:+|nuORF	ENST00000228506.7_1_12:121134956-121135184:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78814697265625	2	441.786579	881.558604	-0.54459	-0.00024059	3.5319	0.0015603	2.9873	0.0013197	441.7881167581505	37.981	2.8453	38.294	37.083	39.929	0.31312					193	69	5	0	0	0	0.85277	1	3115	3115		25.45	0	1	61531000			44904	9204	30103	30116	50848	50848					0.11308733942325944
QIIRLQGQVD	10	Unmodified	_QIIRLQGQVD_					0	0	0		nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;ENSG00000070182|ENST00000644917|SPTB	nc|ENSG00000070182|P11277-3|SPTB	nc|ENSG00000070182|P11277-3|SPTB	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	585.3160400390625	2	585.335487	1168.65642	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.186	1	62.176	61.676	62.676	-0.0094147								0	0	0	0.45132	1	5771	5771		31.53	4.4825	1				44905	1234	30104	30117	50849	50849					0.07883890800371773
QIIVQPKTQKP	11	Unmodified	_QIIVQPKTQKP_					0	0	0		nc|ENSG00000100150|O75140-5|DEPDC5;nc|ENSG00000100150|O75140-8|DEPDC5;nc|ENSG00000100150|O75140-4|DEPDC5;ENSG00000100150|ENST00000651528|DEPDC5;nc|ENSG00000100150|O75140-6|DEPDC5;nc|ENSG00000100150|O75140-1|DEPDC5;nc|ENSG00000100150|O75140-9|DEPDC5	nc|ENSG00000100150|O75140-5|DEPDC5	nc|ENSG00000100150|O75140-5|DEPDC5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3931884765625	2	640.390262	1278.76597	2.3199	0.0014856	1.8427	0.00118	4.1626	0.0026657	640.3913086567981	50.89	1.1946	51.642	51.12	52.315	0.75174					85	28	4	0	0	0	0.72106	1	5049	5049		28.081	2.5074	1	1438200			44906	14808	30105	30118	50850	50850					0.13773896419684206
QIIYGKIPA	9	Unmodified	_QIIYGKIPA_					0	0	0		ENSG00000138379|ENST00000260950|MSTN	ENSG00000138379|ENST00000260950|MSTN	ENSG00000138379|ENST00000260950|MSTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.7828063964844	2	501.80276	1001.59097	0.38365	0.00019252	0.90354	0.0004534	1.2872	0.00064592	502.30563115230376	62.744	0.69134	63.299	62.863	63.555	0.55449					24	15	2	0	0	0	0.20789	1	6705	6705		23.042	3.6825	1	82253			44907	4291	30106	30119	50851	50851					0.09023521345318386
QIKALTERIH	10	Unmodified	_QIKALTERIH_					0	0	0			REV__nc|ENSG00000138778|Q02224-3|CENPE	REV__nc|ENSG00000138778|Q02224-3|CENPE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5754089355469	3	403.575178	1207.70371	-1.8285	-0.00073793	1.0097	0.0004075	-0.81877	-0.00033043	403.5754909660959	80.353	1.0354	80.49	79.889	80.924	0.13702					64	31	3	0	0	0	0.86225	1	7635	7635		32.751	2.1817	1	264210	+		44908	15815	30107	30120	50852	50852					0.10816170071370834
QIKANAEELET	11	Unmodified	_QIKANAEELET_					0	0	0			REV__nc|ENSG00000166960|Q5BJE1-3|CCDC178	REV__nc|ENSG00000166960|Q5BJE1-3|CCDC178	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.8089599609375	3	415.882225	1244.62485	1.2822	0.00053323	-0.079466	-3.3049E-05	1.2027	0.00050018	415.88195648456895	19.127	0.3775	18.658	18.459	18.836	-0.46967					12	8	2	0	0	0	0.1751	1	499	499		42.338	7.1599	1	39638	+		44909	21345	30108	30121	50853	50853					0.012318532557628714
QIKASKTTVTG	11	Unmodified	_QIKASKTTVTG_					0	0	0		nc|ENSG00000079385|P13688-2|CEACAM1;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-10|CEACAM1;ENSG00000079385|ENST00000161559|CEACAM1;ENST00000485605.1_1_19:43015056-43023397:-|nuORF	nc|ENSG00000079385|P13688-2|CEACAM1	nc|ENSG00000079385|P13688-2|CEACAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3298950195312	2	567.32987	1132.64519	1.8589	0.0010546	-2.0003	-0.0011348	-0.14134	-8.0184E-05	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.7144	1	9718	9718		29.17	2.4771	1	15439000			44910	1419	30109	30122	50854	50854					0.08417068706239661
QIKASKTTVTG	11	Unmodified	_QIKASKTTVTG_					0	0	0		nc|ENSG00000079385|P13688-2|CEACAM1;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-10|CEACAM1;ENSG00000079385|ENST00000161559|CEACAM1;ENST00000485605.1_1_19:43015056-43023397:-|nuORF	nc|ENSG00000079385|P13688-2|CEACAM1	nc|ENSG00000079385|P13688-2|CEACAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3301391601562	2	567.32987	1132.64519	-1.3957	-0.00079181	1.2535	0.00071113	-0.14221	-8.0679E-05	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.68532	1	9237	9237		33.922	3.6039	1	17338000			44911	1419	30109	30122	50855	50855					0.08417068706239661
QIKFNSSQE	9	Unmodified	_QIKFNSSQE_					0	0	0		ENSG00000142621|ENST00000688493|FHAD1;ENST00000471347.5_1_1:15654853-15671627:+|nuORF	ENSG00000142621|ENST00000688493|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.7698974609375	2	540.769645	1079.52474	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.296	1	24.252	23.752	24.752	-0.043221								0	0	0	0.4027	1	872	872		54.776	0	1				44912	4576	30110	30123	50856	50856					-0.011843392873743142
QIKFRIELF	9	Unmodified	_QIKFRIELF_					0	0	0			REV__ENSG00000177051|ENST00000317683|FBXO46	REV__ENSG00000177051|ENST00000317683|FBXO46	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3582153320312	2	597.355691	1192.69683	1.8574	0.0011095	1.713	0.0010233	3.5703	0.0021328	597.3562688740209	100.02	4.4704	100.37	97.029	101.5	0.34591					218	110	4	0	0	0	0.7932	1	12122	12122		25.45	2.4077	1	5142000	+		44913	22174	30111	30124	50857	50857					0.10818857190770359
QIKGWRVPIVS	11	Unmodified	_QIKGWRVPIVS_					0	0	0		ENSG00000151952|ENST00000422113|TMEM132D;nc|ENSG00000151952|Q14C87-2|TMEM132D	ENSG00000151952|ENST00000422113|TMEM132D	ENSG00000151952|ENST00000422113|TMEM132D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8818359375	2	641.885147	1281.75574	-1.1528	-0.00073997	-3.087	-0.0019815	-4.2398	-0.0027215	641.8829970841505	95.709	2.5048	95.911	94.329	96.834	0.20242					216	59	5	0	0	0	0.70737	1	9736	9736		30.318	2.2362	1	1922900			44914	5151	30112	30125	50858	50858					0.12613333485114708
QIKKLTGS	8	Unmodified	_QIKKLTGS_					0	0	0		ENSG00000197385|ENST00000360311|ZNF860	ENSG00000197385|ENST00000360311|ZNF860	ENSG00000197385|ENST00000360311|ZNF860	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7709655761719	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.84341	1	2215	2215		24.203	6.8378	1	1151500			44915	8158	30113	30126	50859	50859					0.0865437527713766
QIKKLTGS	8	Unmodified	_QIKKLTGS_					0	0	0		ENSG00000197385|ENST00000360311|ZNF860	ENSG00000197385|ENST00000360311|ZNF860	ENSG00000197385|ENST00000360311|ZNF860	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7712707519531	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.83058	1	2207	2207		12.959	0.75233	1	1041500			44916	8158	30113	30126	50860	50860					0.0865437527713766
QIKKLTGS	8	Unmodified	_QIKKLTGS_					0	0	0		ENSG00000197385|ENST00000360311|ZNF860	ENSG00000197385|ENST00000360311|ZNF860	ENSG00000197385|ENST00000360311|ZNF860	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7715148925781	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.83058	1	3007	3007		12.959	0.75233	1	9763800			44917	8158	30113	30126	50861	50861					0.0865437527713766
QIKLERLEKLY	11	Unmodified	_QIKLERLEKLY_					0	0	0		ENST00000445715.5_1_Y:21755293-21766003:+|nuORF	ENST00000445715.5_1_Y:21755293-21766003:+|nuORF	ENST00000445715.5_1_Y:21755293-21766003:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.2890319824219	3	478.288926	1431.84495	1.1949	0.00057149	-0.63961	-0.00030592	0.55525	0.00026557	478.2885117236148	34.113	0.86948	34.323	33.942	34.812	0.21002					51	20	3	0	0	0	0.72374	1	2488	2488		27.644	3.4121	1	928240			44918	11827	30114	30127	50862	50862					0.14630123654001181
QIKPKKSK	8	Unmodified	_QIKPKKSK_					0	0	0		ENSG00000149177|ENST00000418331|PTPRJ;nc|ENSG00000149177|Q12913-3|PTPRJ	ENSG00000149177|ENST00000418331|PTPRJ	ENSG00000149177|ENST00000418331|PTPRJ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.8043518066406	2	478.816202	955.617851	-1.1828	-0.00056632	-1.2849	-0.00061524	-2.4677	-0.0011816	478.8155054892525	40.314	0.59016	40.706	40.377	40.968	0.39209					24	15	2	0	0	0	0.4196	1	3424	3424		40.778	0	1	391640			44919	5001	30115	30128	50863	50863					0.13826629956508896
QIKPLRAREQ	10	Unmodified	_QIKPLRAREQ_					0	0	0			REV__nc|ENSG00000065613|Q9H2G2-2|SLK	REV__nc|ENSG00000065613|Q9H2G2-2|SLK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.869140625	2	619.870028	1237.7255	1.2648	0.00078404	-2.3923	-0.0014829	-1.1274	-0.00069886	619.86841143733	93.879	2.9041	94.108	92.241	95.145	0.22863					217	69	4	0	0	0	0.86218	1	9505	9505		32.812	1.2826	1	2572300	+		44920	16506	30116	30129	50864	50864					0.11614974819917734
QIKQKVDSL	9	Unmodified	_QIKQKVDSL_					0	0	0		ENSG00000277058|ENST00000617807|HNRNPCL3;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000179172|ENST00000317869|HNRNPCL1;ENST00000571636.1_1_16:11336795-11337332:+|nuORF;ENST00000556181.1_1_14:58988389-58988443:+|nuORF;ENST00000553444.1_1_14:21679384-21680083:-|nuORF;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC	ENSG00000277058|ENST00000617807|HNRNPCL3;nc|ENSG00000092199|P07910-3|HNRNPC	ENSG00000277058|ENST00000617807|HNRNPCL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.8136596679688	2	529.813856	1057.61316	0.82368	0.0004364	-0.87873	-0.00046556	-0.055051	-2.9167E-05	529.8132607725706	28.221	0.81391	28.198	27.978	28.792	-0.023558					38	18	3	0	0	0	0.48102	1	1341	1341		52.937	12.159	1	203400			44921	7253;1694	30117	30130	50865	50865					0.0866570102307378
QIKQKVDSL	9	Unmodified	_QIKQKVDSL_					0	0	0		ENSG00000277058|ENST00000617807|HNRNPCL3;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000179172|ENST00000317869|HNRNPCL1;ENST00000571636.1_1_16:11336795-11337332:+|nuORF;ENST00000556181.1_1_14:58988389-58988443:+|nuORF;ENST00000553444.1_1_14:21679384-21680083:-|nuORF;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC	ENSG00000277058|ENST00000617807|HNRNPCL3;nc|ENSG00000092199|P07910-3|HNRNPC	ENSG00000277058|ENST00000617807|HNRNPCL3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	529.813856	1057.61316	0.4653	0.00024652	-0.48005	-0.00025434	-0.014751	-7.8152E-06	529.8134735993162	28.125	0.67264	28.161	27.872	28.544	0.03607	0.0095339	0.00011014	NaN	52.937	55	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	175510			44922	7253;1694	30117	30130							0.0866570102307378
QIKRKILDELQ	11	Unmodified	_QIKRKILDELQ_					0	0	0			REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.9482421875	3	461.948793	1382.82455	1.4853	0.00068611	-2.5605	-0.0011828	-1.0752	-0.00049669	461.94752150740254	107.41	0.52853	107.52	107.23	107.76	0.10396					75	22	4	0	0	0	0.75779	1	13104	13104		20.315	1.0523	1	1381000	+		44923	18928	30118	30131	50866	50866					0.14844952994189953
QIKSNIPLPP	10	Unmodified	_QIKSNIPLPP_					0	0	0			REV__ENSG00000143278|ENST00000367412|F13B	REV__ENSG00000143278|ENST00000367412|F13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8302001953125	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.80179	1	10825	10825		39.253	2.8061	1	5381700	+		44924	19786	30119	30132	50867	50867					0.10094577919812764
QIKVRHLKST	10	Unmodified	_QIKVRHLKST_					0	0	0			REV__nc|ENSG00000036257|Q13618-3|CUL3	REV__nc|ENSG00000036257|Q13618-3|CUL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92144775390625	3	403.919056	1208.73534	-2.0251	-0.00081798	-2.61	-0.0010542	-4.6351	-0.0018722	403.917757150303	42.949	0.48149	43.647	43.506	43.987	0.69754					13	11	2	0	0	0	0.86647	1	3921	3921		28.577	0	1	84638	+		44925	16291	30120	30133	50868	50868					0.13932162825290106
QIKWLGGGRAM	11	Unmodified	_QIKWLGGGRAM_					0	0	0			REV__ENST00000415030.6_1_11:118007494-118007596:-|nuORF	REV__ENST00000415030.6_1_11:118007494-118007596:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.8368530273438	2	608.8346	1215.65465	0.093851	5.714E-05	3.8499	0.002344	3.9438	0.0024011	608.836828431824	110.46	1.0631	110.5	110.23	111.29	0.031738					103	33	4	0	0	0	0.70737	2	12105	12085;12105		30.318	2.2362	1	3714300	+		44926	26414	30121	30134	50869;50870	50870					0.05544558510769093
QILCICFIY	9	Unmodified	_QILCICFIY_					0	0	0		ENST00000503771.1_1_3:45266207-45266372:-|nuORF	ENST00000503771.1_1_3:45266207-45266372:-|nuORF	ENST00000503771.1_1_3:45266207-45266372:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.2870483398438	2	558.285031	1114.55551	-1.0256	-0.0005726	0.4138	0.00023102	-0.61184	-0.00034158	558.2848413699397	75.44	0.58796	75.486	75.204	75.792	0.045959					38	17	3	0	0	0	0.78058	1	7262	7262		30.504	0	1	79645			44927	12893	30122	30135	50871	50871					0.0028139950165950722
QILCICFIY	9	Unmodified	_QILCICFIY_					0	0	0		ENST00000503771.1_1_3:45266207-45266372:-|nuORF	ENST00000503771.1_1_3:45266207-45266372:-|nuORF	ENST00000503771.1_1_3:45266207-45266372:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.7872924804688	2	558.285031	1114.55551	0.12978	7.2453E-05	-1.1049	-0.00061684	-0.9751	-0.00054438	558.2839602042076	75.399	0.59948	75.353	75.025	75.624	-0.045982					34	15	3	0	0	0	0.5393	1	7428	7428		50.025	4.0726	1	108530			44928	12893	30122	30135	50872	50872					0.0028139950165950722
QILERHKKKRK	11	Unmodified	_QILERHKKKRK_					0	0	0			REV__nc|ENSG00000147133|P21675-25|TAF1	REV__nc|ENSG00000147133|P21675-25|TAF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	488.9623107910156	3	488.64756	1462.92085	0.73347	0.00035841	-3.5585	-0.0017389	-2.825	-0.0013804	488.6461176481491	16.804	0.39051	16.78	16.523	16.913	-0.024035					34	16	3	0	0	0	0.18034	1	163	163		8.0344	2.6214	1	302650	+		44929	20054	30123	30136	50873	50873					0.2079056534475967
QILERHKKKRK	11	Unmodified	_QILERHKKKRK_					0	0	0			REV__nc|ENSG00000147133|P21675-25|TAF1	REV__nc|ENSG00000147133|P21675-25|TAF1	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	488.64756	1462.92085	-1.9801	-0.00096759	-0.25123	-0.00012277	-2.2314	-0.0010904	488.64739857003354	16.995	0.39079	16.995	16.79	17.181	0	0.1457	0.0025784	NaN	8.0344	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77869	+		44930	20054	30123	30136							0.2079056534475967
QILFSKKDS	9	Unmodified	_QILFSKKDS_					0	0	0		nc|ENSG00000104946|Q9HA65-3|TBC1D17;nc|ENSG00000104946|Q9HA65-2|TBC1D17;ENSG00000104946|ENST00000221543|TBC1D17	nc|ENSG00000104946|Q9HA65-3|TBC1D17	nc|ENSG00000104946|Q9HA65-3|TBC1D17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.8023071289062	2	533.300581	1064.58661	-0.46862	-0.00024992	0.32551	0.00017359	-0.14311	-7.6322E-05	533.3007266349649	31.256	2.7034	31.336	29.971	32.674	0.079834					123	61	4	0	0	0	0.66686	1	2117	2117		42.864	5.7052	1	663570			44931	2171	30124	30137	50874	50874					0.05690012131753974
QILFTVWLP	9	Unmodified	_QILFTVWLP_					0	0	0		ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	ENSG00000221954|ENST00000335238|OR4C12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8270874023438	2	558.826235	1115.63792	-0.1486	-8.3042E-05	2.5867	0.0014455	2.4381	0.0013625	558.8274959479605	65.531	0.78168	65.558	65.246	66.027	0.027321					103	42	3	0	0	0	0.76402	1	6216	6216		35.201	1.0282	1	6703400			44932	8689	30125	30138	50875	50875					0.08472380896455434
QILIKEDDF	9	Unmodified	_QILIKEDDF_					0	0	0			REV__ENST00000577324.1_1_17:30677304-30687987:+|nuORF	REV__ENST00000577324.1_1_17:30677304-30687987:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.7968139648438	2	560.797872	1119.58119	0.80766	0.00045293	-1.3314	-0.00074664	-0.52373	-0.00029371	560.7971860774161	80.48	0.66477	80.536	80.286	80.951	0.055916					29	15	3	0	0	0	0.58151	1	7981	7981		47.916	0	1	132120	+		44933	16159	30126	30139	50876	50876					0.02618288549274439
QILIYILVEL	10	Unmodified	_QILIYILVEL_					0	0	0			REV__ENST00000605357.5_1_7:20368428-20368995:-|nuORF	REV__ENST00000605357.5_1_7:20368428-20368995:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2554016113281	3	406.256564	1215.74786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.215	1	65.219	64.719	65.719	0.0046997								0	0	0	0.45132	1	6126	6126		14.694	0	1		+		44934	29360	30127	30140	50877	50877					0.14861761444990407
QILMVKIKSE	10	Unmodified	_QILMVKIKSE_					0	0	0		ENSG00000180530|ENST00000318948|NRIP1	ENSG00000180530|ENST00000318948|NRIP1	ENSG00000180530|ENST00000318948|NRIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.8519897460938	2	594.854667	1187.69478	-0.64844	-0.00038573	-2.3566	-0.0014018	-3.005	-0.0017875	594.8531383612473	45.556	0.77293	46.028	45.684	46.457	0.47139					54	18	4	0	0	0	0.31985	1	4271	4271		70.816	10.698	1	4203700			44935	7332	30128	30141	50878	50878					0.10844060390650156
QILPNAQLVF	10	Unmodified	_QILPNAQLVF_					0	0	0		nc|ENSG00000157107|Q0JRZ9-3|FCHO2;ENSG00000157107|ENST00000430046|FCHO2	nc|ENSG00000157107|Q0JRZ9-3|FCHO2	nc|ENSG00000157107|Q0JRZ9-3|FCHO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.8339233398438	2	571.832049	1141.64954	-0.97293	-0.00055635	1.2038	0.00068836	0.23085	0.000132	571.8326145712639	76.467	0.58675	76.557	76.254	76.841	0.089363					62	21	4	0	0	0	0.85934	1	7152	7152		35.618	2.8059	1	535810			44936	5412	30129	30142	50879	50879					0.08438577919810086
QILPRPPPIPP	11	Unmodified	_QILPRPPPIPP_					0	0	0			REV__nc|ENSG00000122257|Q7Z6E9-2|RBBP6	REV__nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.92218017578125	3	408.920286	1223.73903	3.1807	0.0013007	1.6839	0.00068856	4.8646	0.0019892	408.92095568616344	104.57	4.1233	104.61	103.07	107.19	0.039856					288	98	5	0	0	0	0.72918	1	11371	11371		29.551	0	1	4230400	+		44937	18486	30130	30143	50880	50880					0.13610832599169953
QILQGLVDVRI	11	Unmodified	_QILQGLVDVRI_					0	0	0		ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3847045898438	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.7144	1	12882	12882		29.17	0	1	19815000			44938	5851	30131	30144	50881	50881					0.1340560990265658
QILQQVGRVKN	11	Unmodified	_QILQQVGRVKN_					0	0	0			REV__nc|ENSG00000196236|Q9NQH7-3|XPNPEP3	REV__nc|ENSG00000196236|Q9NQH7-3|XPNPEP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8822631835938	2	641.883136	1281.75172	2.2004	0.0014124	-3.2914	-0.0021127	-1.091	-0.0007003	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.7342	1	10418	10418		25.574	1.0549	1	3624200	+		44939	23106	30132	30145	50882	50882					0.12211243991418996
QILRPVAVSD	10	Unmodified	_QILRPVAVSD_					0	0	0			REV__ENSG00000138641|ENST00000402738|HERC3	REV__ENSG00000138641|ENST00000402738|HERC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.318603515625	2	549.319306	1096.62406	1.2725	0.00069901	-4.2602	-0.0023402	-2.9877	-0.0016412	549.3168832768056	100.86	2.4507	100.91	100.43	102.88	0.046356					139	58	4	0	0	0	0.8651	1	10819	10819		25.574	2.9944	1	1880500	+		44940	19486	30133	30146	50883	50883					0.0796110339738334
QILRRIGA	8	Unmodified	_QILRRIGA_					0	0	0		ENSG00000164828|ENST00000401592|SUN1;nc|ENSG00000164828|O94901-9|SUN1;ENST00000413171.6_1_7:872152-892516:+|nuORF	ENSG00000164828|ENST00000401592|SUN1	ENSG00000164828|ENST00000401592|SUN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8003234863281	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.86288	1	3374	3374		26.796	0	1	1570500			44941	6008	30134	30147	50884	50884					0.11636592499519338
QILSHRFKGP	10	Unmodified	_QILSHRFKGP_					0	0	0		nc|ENSG00000108309|Q59EK9-2|RUNDC3A	nc|ENSG00000108309|Q59EK9-2|RUNDC3A	nc|ENSG00000108309|Q59EK9-2|RUNDC3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	591.8411865234375	2	591.840739	1181.66693	-0.40666	-0.00024068	-0.86718	-0.00051323	-1.2738	-0.00075391	591.8401589231509	54.069	0.87833	54.654	54.291	55.169	0.58474					54	20	4	0	0	0	0.6116	1	5529	5529		49.442	1.7842	1	1346000			44942	14837	30135	30148	50885	50885					0.08335918245438734
QILSVKSH	8	Unmodified	_QILSVKSH_					0	0	0		nc|ENSG00000167767|Q6KB66-2|KRT80;ENSG00000167767|ENST00000394815|KRT80;CON__Q6KB66-1;nc|ENSG00000167767|Q6KB66-3|KRT80;ENST00000466011.1_1_12:52565184-52579482:-|nuORF	nc|ENSG00000167767|Q6KB66-2|KRT80	nc|ENSG00000167767|Q6KB66-2|KRT80	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.2691955566406	2	456.269084	910.523616	-1.2298	-0.00056112	1.3658	0.00062319	0.13603	6.2066E-05	456.26955386041453	27.778	1.0533	27.681	27.36	28.413	-0.096945					55	24	3	0	0	0	0.36381	1	1632	1632		82.305	5.5309	1	414790		+	44943	628	30136	30149	50886	50886					0.06477491134376123
QILSVKSH	8	Unmodified	_QILSVKSH_					0	0	0		nc|ENSG00000167767|Q6KB66-2|KRT80;ENSG00000167767|ENST00000394815|KRT80;CON__Q6KB66-1;nc|ENSG00000167767|Q6KB66-3|KRT80;ENST00000466011.1_1_12:52565184-52579482:-|nuORF	nc|ENSG00000167767|Q6KB66-2|KRT80	nc|ENSG00000167767|Q6KB66-2|KRT80	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.2693176269531	2	456.269084	910.523616	1.0852	0.00049514	-0.94589	-0.00043158	0.1393	6.3559E-05	456.26850794128734	27.802	1.27	27.547	27.196	28.466	-0.25465					68	30	3	0	0	0	0.79403	1	1661	1661		63.306	0	1	382970		+	44944	628	30136	30149	50887	50887					0.06477491134376123
QILVGIVRRAQ	11	Unmodified	_QILVGIVRRAQ_					0	0	0		nc|ENSG00000184908|P51801-2|CLCNKB;ENSG00000184908|ENST00000375679|CLCNKB	nc|ENSG00000184908|P51801-2|CLCNKB	nc|ENSG00000184908|P51801-2|CLCNKB	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2652893066406	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.314	1	50.343	49.843	50.843	0.029629								0	0	0	0.56276	1	3945	3945		23.378	0.79825	1				44945	7652	30137	30150	50888	50888					0.16172138233719124
QIMCRFKV	8	Unmodified	_QIMCRFKV_					0	0	0			REV__ENST00000466047.5_1_10:121609046-121633060:-|nuORF	REV__ENST00000466047.5_1_10:121609046-121633060:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.7724609375	2	512.775165	1023.53578	0.31372	0.00016087	-1.6527	-0.00084745	-1.3389	-0.00068658	512.7742355656881	45.146	0.70348	45.192	44.903	45.606	0.046635					32	16	3	0	0	0	0.88915	1	3270	3270		35.201	4.6971	1	383840	+		44946	23267	30138	30151	50889	50889					0.024950682815529035
QIMLHPAPPNG	11	Unmodified	_QIMLHPAPPNG_					0	0	0		nc|ENSG00000119535|Q99062-4|CSF3R	nc|ENSG00000119535|Q99062-4|CSF3R	nc|ENSG00000119535|Q99062-4|CSF3R	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.8063354492188	2	587.805508	1173.59646	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.099	1	15.612	15.112	16.112	-0.48718								0	0	0	0.56276	1	87	87		45.972	8.4641	1				44947	14870	30139	30152	50890	50890					0.016608768654577943
QIMLPLGK	8	Unmodified	_QIMLPLGK_					0	0	0			REV__nc|ENSG00000083307|Q6ISB3-2|GRHL2	REV__nc|ENSG00000083307|Q6ISB3-2|GRHL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.274169921875	2	450.272781	898.531009	1.7291	0.00077856	1.6772	0.00075519	3.4063	0.0015338	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.884	1	10075	10075		33.516	1.5607	1	51820000	+		44948	16851	30140	30153	50891	50891					0.07768507410446546
QIMLPLGK	8	Unmodified	_QIMLPLGK_					0	0	0			REV__nc|ENSG00000083307|Q6ISB3-2|GRHL2	REV__nc|ENSG00000083307|Q6ISB3-2|GRHL2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2752380371094	2	450.272781	898.531009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.45	1	113.43	112.93	113.93	-0.024811								0	0	0	0.29755	1	12553	12553		24.203	3.7209	1		+		44949	16851	30140	30153	50892	50892					0.07768507410446546
QINLYLKMEKK	11	Unmodified	_QINLYLKMEKK_					0	0	0		nc|ENSG00000006576|Q8N3S3-4|PHTF2;nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;ENSG00000116793|ENST00000369604|PHTF1	nc|ENSG00000006576|Q8N3S3-4|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.310791015625	3	469.939129	1406.79556	0.052049	2.446E-05	-0.76922	-0.00036148	-0.71717	-0.00033702	470.27311991221165	16.538	0.23787	16.597	16.438	16.676	0.059269					11	8	2	0	0	0	0.17567	1	152	152		24.276	8.3553	1	49469			44950	703	30141	30154	50893	50893					0.10843092373511354
QINQRQESL	9	Unmodified	_QINQRQESL_					0	0	0		nc|ENSG00000111679|P29350-2|PTPN6;ENST00000416215.6_1_12:7061038-7070080:+|nuORF;ENSG00000111679|ENST00000318974|PTPN6;nc|ENSG00000111679|P29350-3|PTPN6;nc|ENSG00000111679|P29350-4|PTPN6	nc|ENSG00000111679|P29350-2|PTPN6	nc|ENSG00000111679|P29350-2|PTPN6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.2988891601562	2	558.293819	1114.57309	0.81218	0.00045343	-0.3426	-0.00019127	0.46958	0.00026216	558.2935445173563	30.567	0.41573	30.556	30.334	30.75	-0.010656					14	10	2	0	0	0	0.67345	1	1613	1613		42.396	3.59	1	29359			44951	2602	30142	30155	50894	50894					0.02038154352521815
QIPCPLPV	8	Carbamidomethyl (C)	_QIPC(Carbamidomethyl (C))PLPV_	QIPC(1)PLPV		QIPC(45)PLPV		0	1	0		ENSG00000139209|ENST00000266579|SLC38A4	ENSG00000139209|ENST00000266579|SLC38A4	ENSG00000139209|ENST00000266579|SLC38A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	462.255859375	2	462.254588	922.494624	-1.6815	-0.00077729	4.036	0.0018656	2.3544	0.0010883	462.25621077069724	50.777	1.0795	50.777	50.38	51.46	0					48	27	3	0	0	0	0.9159	1	4056	4056		44.531	7.372	1	317310			44952	4355	30143	30156	50895	50895	57				0.030276305137363124
QIPDLQQGV	9	Unmodified	_QIPDLQQGV_					0	0	0			REV__ENST00000602506.5_1_16:67760333-67793575:-|nuORF	REV__ENST00000602506.5_1_16:67760333-67793575:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.2709655761719	2	499.269281	996.52401	0.063777	3.1842E-05	-0.17125	-8.5499E-05	-0.10747	-5.3657E-05	499.2690985885145	20.416	0.67497	19.786	19.443	20.118	-0.6296					31	14	3	0	0	0	0.67345	1	663	663		42.396	3.1433	1	347620	+		44953	19661	30144	30157	50896	50896					0.025608660635725755
QIPDLVPS	8	Unmodified	_QIPDLVPS_					0	0	0		ENST00000600048.1_1_19:59082132-59084077:-|nuORF	ENST00000600048.1_1_19:59082132-59084077:-|nuORF	ENST00000600048.1_1_19:59082132-59084077:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7806091308594	2	434.742368	867.470183	1.6433	0.00071443	1.8497	0.00080415	3.4931	0.0015186	434.7431199260413	35.29	0.26694	35.671	35.52	35.787	0.3812					9	6	2	0	0	0	0.4196	1	2721	2721		7.6903	4.0059	1	58898			44954	14376	30145	30158	50897	50897					0.0311469363185779
QIQTLLATY	9	Unmodified	_QIQTLLATY_					0	0	0			REV__ENSG00000196859|ENST00000355612|KRT39	REV__ENSG00000196859|ENST00000355612|KRT39	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3613891601562	2	525.795132	1049.57571	1.1324	0.00059538	-1.4588	-0.00076705	-0.32648	-0.00017166	525.7941653627225	34.475	0.33362	34.685	34.563	34.897	0.21002					10	7	2	0	0	0	0.20789	1	2581	2581		56.721	14.325	1	249230	+	+	44955	16021	30146	30159	50898	50898					0.052906097574805244
QIRARPCT	8	Unmodified	_QIRARPCT_					0	0	0			REV__ENST00000598782.1_1_19:4785174-4785513:-|nuORF	REV__ENST00000598782.1_1_19:4785174-4785513:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2876281738281	2	472.758361	943.502169	-1.7037	-0.00080542	-4.2155	-0.0019929	-5.9192	-0.0027983	472.75480554681377	95.429	0.16629	95.632	95.557	95.723	0.20242					5	3	2	0	0	0	0.4196	1	9728	9728		18.324	0	1	27138	+		44956	29290	30147	30160	50899	50899					0.02815782833999947
QIRDLILV	8	Unmodified	_QIRDLILV_					0	0	0			REV__chr17:6449407-6450362|59|20.68|0.57|5.19|+|ENST00000572595|PIMREG,PIMREG	REV__chr17:6449407-6450362|59|20.68|0.57|5.19|+|ENST00000572595|PIMREG,PIMREG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.3074951171875	2	485.30821	968.601866	0.54019	0.00026216	-0.7974	-0.00038699	-0.25721	-0.00012483	485.3076614228541	33.419	0.67168	33.589	33.271	33.943	0.16971					29	15	3	0	0	0	0.83456	1	2410	2410		60.972	8.0352	1	419320	+		44957	15664	30148	30161	50900	50900					0.11630923719610564
QIRDLILV	8	Unmodified	_QIRDLILV_					0	0	0			REV__chr17:6449407-6450362|59|20.68|0.57|5.19|+|ENST00000572595|PIMREG,PIMREG	REV__chr17:6449407-6450362|59|20.68|0.57|5.19|+|ENST00000572595|PIMREG,PIMREG	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	485.30821	968.601866	0.54019	0.00026216	-0.7974	-0.00038699	-0.25721	-0.00012483	485.3076614228541	33.419	0.67168	33.589	33.271	33.943	0.16971	-0.018946	7.6309E-06	NaN	60.972	29	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	419320	+		44958	15664	30148	30161							0.11630923719610564
QIRIRQYNQYI	11	Unmodified	_QIRIRQYNQYI_					0	0	0			REV__ENST00000477668.5_1_3:127323572-127337961:+|nuORF	REV__ENST00000477668.5_1_3:127323572-127337961:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.80364990234375	3	498.944042	1493.8103	-0.60268	-0.0003007	-0.003828	-1.91E-06	-0.6065	-0.00030261	498.94406496164964	51.773	1.0115	51.808	51.448	52.46	0.034584					86	32	4	0	0	0	0.17521	1	4121	4121		22.562	8.4756	1	914620	+		44959	16666	30149	30162	50901	50901					0.08314300565893973
QIRLGIEEE	9	Unmodified	_QIRLGIEEE_					0	0	0			REV__ENST00000286800.7_1_21:30715829-30715970:+|nuORF	REV__ENST00000286800.7_1_21:30715829-30715970:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.7959594726562	2	543.793121	1085.57169	0.4756	0.00025863	4.3931	0.002389	4.8687	0.0026476	543.795425902486	28.837	0.74174	28.664	28.365	29.107	-0.17336					38	16	3	0	0	0	0.36616	1	1798	1798		60.118	5.0344	1	417870	+		44960	24643	30150	30163	50902	50902					0.032325202637593975
QIRLVSGAGDD	11	Unmodified	_QIRLVSGAGDD_					0	0	0			REV__ENSG00000142949|ENST00000359947|PTPRF	REV__ENSG00000142949|ENST00000359947|PTPRF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.7959594726562	2	565.793652	1129.57275	0.82828	0.00046864	3.3184	0.0018775	4.1466	0.0023461	565.7953584324353	67.212	1.0229	67.597	67.202	68.225	0.38515					61	28	3	0	0	0	0.39278	1	7358	7358		59.931	4.4266	1	1529300	+		44961	19763	30151	30164	50903	50903					0.013147346326604747
QIRLVSGAGDD	11	Unmodified	_QIRLVSGAGDD_					0	0	0			REV__ENSG00000142949|ENST00000359947|PTPRF	REV__ENSG00000142949|ENST00000359947|PTPRF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	565.793652	1129.57275	0.82828	0.00046864	3.3184	0.0018775	4.1466	0.0023461	565.7953584324353	67.212	1.0229	67.597	67.202	68.225	0.38515	-0.0012045	-6.9762E-05	NaN	59.931	61	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1529300	+		44962	19763	30151	30164							0.013147346326604747
QIRVNPIKDKL	11	Unmodified	_QIRVNPIKDKL_					0	0	0			REV__ENSG00000109805|ENST00000251496|NCAPG	REV__ENSG00000109805|ENST00000251496|NCAPG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.94036865234375	3	441.94175	1322.80342	-0.13164	-5.8177E-05	-4.1939	-0.0018535	-4.3256	-0.0019117	441.93974761618824	56.948	1.0225	56.935	56.674	57.696	-0.012203					78	36	3	0	0	0	0.75121	1	5128	5128		21.78	5.2506	1	317980	+		44963	17775	30152	30165	50904	50904					0.15492987685320259
QIRWPLAI	8	Unmodified	_QIRWPLAI_					0	0	0		ENSG00000157103|ENST00000287766|SLC6A1	ENSG00000157103|ENST00000287766|SLC6A1	ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8033447265625	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.88915	1	4521	4521		35.201	1.6851	1	2118300			44964	5410	30153	30166	50905	50905					0.09366360785008965
QIRWPLAI	8	Unmodified	_QIRWPLAI_					0	0	0		ENSG00000157103|ENST00000287766|SLC6A1	ENSG00000157103|ENST00000287766|SLC6A1	ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.8036804199219	2	498.803094	995.591636	-1.3081	-0.00065249	2.3965	0.0011954	1.0884	0.0005429	498.8041766680537	51.78	2.176	51.792	51.267	53.443	0.012436					146	54	4	0	0	0	0.884	1	4443	4443		33.516	1.5607	1	2702800			44965	5410	30153	30166	50906	50906					0.09366360785008965
QIRWPLAI	8	Unmodified	_QIRWPLAI_					0	0	0		ENSG00000157103|ENST00000287766|SLC6A1	ENSG00000157103|ENST00000287766|SLC6A1	ENSG00000157103|ENST00000287766|SLC6A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.80322265625	2	498.803094	995.591636	0.57569	0.00028715	0.65338	0.00032591	1.2291	0.00061306	498.80326110747177	49.369	1.5492	50.214	49.828	51.377	0.84501					106	37	4	0	0	0	0.81548	1	4873	4873		20.482	1.1219	1	6182600			44966	5410	30153	30166	50907	50907					0.09366360785008965
QISCRSRRGG	10	Unmodified	_QISCRSRRGG_					0	0	0		CON__Q3TTY5	CON__Q3TTY5	CON__Q3TTY5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.29345703125	2	560.29363	1118.57271	-0.11663	-6.5344E-05	-0.44457	-0.00024909	-0.56119	-0.00031443	560.2933678221074	28.363	0.49067	28.266	28.011	28.502	-0.096945					21	11	2	0	0	0	0.73395	1	1728	1728		42.864	2.8061	1	132890		+	44967	623	30154	30167	50908	50908					0.018164561516641697
QISYASTAPEL	11	Unmodified	_QISYASTAPEL_					0	0	0		ENSG00000113262|ENST00000517717|GRM6;nc|ENSG00000179603|O00222-3|GRM8;nc|ENSG00000179603|O00222-2|GRM8;ENSG00000179603|ENST00000339582|GRM8;nc|ENSG00000196277|Q14831-5|GRM7;nc|ENSG00000196277|Q14831-3|GRM7;nc|ENSG00000196277|Q14831-4|GRM7;ENSG00000196277|ENST00000357716|GRM7;nc|ENSG00000196277|Q14831-2|GRM7	ENSG00000113262|ENST00000517717|GRM6;nc|ENSG00000196277|Q14831-5|GRM7	ENSG00000113262|ENST00000517717|GRM6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.303955078125	2	590.298236	1178.58192	-1.7236	-0.0010174	1.9416	0.0011461	0.21805	0.00012872	590.2995134664934	52.545	0.98888	52.562	52.091	53.08	0.017487					35	23	3	0	0	0	0.67778	1	4601	4601		35.152	3.6222	1	139120			44968	2707;8033	30155	30168	50909	50909					-0.00022916801685823884
QITDDLFVWN	10	Unmodified	_QITDDLFVWN_					0	0	0		nc|ENSG00000091106|Q9NPP4-4|NLRC4;nc|ENSG00000091106|Q9NPP4-3|NLRC4;nc|ENSG00000091106|Q9NPP4-2|NLRC4;ENSG00000091106|ENST00000402280|NLRC4	nc|ENSG00000091106|Q9NPP4-4|NLRC4	nc|ENSG00000091106|Q9NPP4-4|NLRC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2896728515625	3	417.539911	1249.5979	0.051273	2.1409E-05	1.0367	0.00043285	1.0879	0.00045426	417.54024417036123	74.208	1.0813	74.767	74.369	75.45	0.55891					61	25	3	0	0	0	0.37624	1	8360	8360		20.03	0	1	1523800			44969	1665	30156	30169	50910	50910					-0.016912105647634235
QITGVGLLG	9	Unmodified	_QITGVGLLG_					0	0	0		chr3:197950270-197950936|26|552.92|0.24|11.19|+|2|None,RPL35A|1	chr3:197950270-197950936|26|552.92|0.24|11.19|+|2|None,RPL35A|1	chr3:197950270-197950936|26|552.92|0.24|11.19|+|2|None,RPL35A|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.75042724609375	2	429.258185	856.501818	1.5604	0.0006698	-0.67852	-0.00029126	0.88184	0.00037854	429.2577775032291	36.499	1.315	36.939	36.259	37.574	0.44043					52	31	2	0	0	0	0.20789	1	2793	2793		31.53	0	1	90427			44970	400	30157	30170	50911	50911					0.06782686385804482
QITGVGLLG	9	Unmodified	_QITGVGLLG_					0	0	0		chr3:197950270-197950936|26|552.92|0.24|11.19|+|2|None,RPL35A|1	chr3:197950270-197950936|26|552.92|0.24|11.19|+|2|None,RPL35A|1	chr3:197950270-197950936|26|552.92|0.24|11.19|+|2|None,RPL35A|1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	429.258185	856.501818	0.55626	0.00023878	0.26968	0.00011576	0.82594	0.00035454	429.2581871674029	36.586	0.95076	36.867	36.429	37.38	0.28173	-0.035885	0.00028289	NaN	31.53	36	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121570			44971	400	30157	30170							0.06782686385804482
QITKQLITVKH	11	Unmodified	_QITKQLITVKH_					0	0	0			REV__ENST00000540344.5_1_12:498593-542579:+|nuORF	REV__ENST00000540344.5_1_12:498593-542579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2742004394531	3	436.938117	1307.79252	0.087811	3.8368E-05	3.5222	0.001539	3.61	0.0015773	436.93951486031364	46.748	1.4073	46.734	46.189	47.597	-0.013821					110	37	4	0	0	0	0.76892	1	3764	3764		17.833	0.6664	1	618900	+		44972	18419	30158	30171	50912	50912					0.15093585311024071
QITKQLITVKH	11	Unmodified	_QITKQLITVKH_					0	0	0			REV__ENST00000540344.5_1_12:498593-542579:+|nuORF	REV__ENST00000540344.5_1_12:498593-542579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.274169921875	3	436.938117	1307.79252	-0.48993	-0.00021407	1.6948	0.00074052	1.2049	0.00052646	436.93993311330917	55.356	1.163	55.329	54.946	56.109	-0.027275					72	30	4	0	0	0	0.76579	1	5046	5046		18.531	0.69791	1	489260	+		44973	18419	30158	30171	50913	50913					0.15093585311024071
QITKQLITVKH	11	Unmodified	_QITKQLITVKH_					0	0	0			REV__ENST00000540344.5_1_12:498593-542579:+|nuORF	REV__ENST00000540344.5_1_12:498593-542579:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2738952636719	3	436.938117	1307.79252	0.24889	0.00010875	3.5908	0.0015689	3.8397	0.0016777	436.9395594339826	46.446	1.4419	46.484	46.059	47.501	0.038185					107	39	4	0	0	0	0.72892	1	3451	3451		26.75	1.6819	1	827010	+		44974	18419	30158	30171	50914	50914					0.15093585311024071
QITKQLITVKH	11	Unmodified	_QITKQLITVKH_					0	0	0			REV__ENST00000540344.5_1_12:498593-542579:+|nuORF	REV__ENST00000540344.5_1_12:498593-542579:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.9400329589844	3	436.938117	1307.79252	-0.36541	-0.00015966	3.9293	0.0017169	3.5639	0.0015572	436.93986861575377	52.649	0.95123	53.072	52.681	53.632	0.42348					63	22	4	0	0	0	0.72892	1	5276	5276		26.75	0.68632	1	826520	+		44975	18419	30158	30171	50915	50915					0.15093585311024071
QITLIITT	8	Unmodified	_QITLIITT_					0	0	0		ENST00000295851.9_2_2:204293378-204293543:+|nuORF	ENST00000295851.9_2_2:204293378-204293543:+|nuORF	ENST00000295851.9_2_2:204293378-204293543:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.7796325683594	2	451.781493	901.548434	-1.2361	-0.00055844	-1.7789	-0.00080368	-3.015	-0.0013621	451.78060040496564	86.527	1.3161	86.721	86.176	87.492	0.19379					78	30	4	0	0	0	0.85277	1	8492	8492		25.45	0	1	231810			44976	9723	30159	30172	50916	50916					0.09372126217078858
QITLPGNKI	9	Unmodified	_QITLPGNKI_					0	0	0		ENSG00000141384|ENST00000269142|TAF4B;nc|ENSG00000141384|Q92750-2|TAF4B;ENST00000504528.2_1_4:113747859-113748312:+|nuORF	ENSG00000141384|ENST00000269142|TAF4B	ENSG00000141384|ENST00000269142|TAF4B	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.29486083984375	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.859	1	66.985	66.485	67.485	0.12649								0	0	0	0.29796	1	5957	5957		31.53	1.0262	1				44977	4495	30160	30173	50917	50917					0.08914333339930636
QIVHHKKVSV	10	Unmodified	_QIVHHKKVSV_					0	0	0			REV__nc|ENSG00000184226|Q9HC56-2|PCDH9	REV__nc|ENSG00000184226|Q9HC56-2|PCDH9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.3273315429688	2	587.85639	1173.69823	-1.6528	-0.00097161	0.70867	0.0004166	-0.94413	-0.00055501	587.8568345792762	72.523	0.82999	72.909	72.583	73.413	0.38582					41	19	3	0	0	0	0.37624	1	8067	8067		18.262	2.6203	1	270760	+		44978	22657	30161	30174	50918	50918					0.11832491279551505
QIVHHKKVSV	10	Unmodified	_QIVHHKKVSV_					0	0	0			REV__nc|ENSG00000184226|Q9HC56-2|PCDH9	REV__nc|ENSG00000184226|Q9HC56-2|PCDH9	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	587.85639	1173.69823	-0.0019353	-1.1377E-06	-0.86785	-0.00051017	-0.86978	-0.00051131	587.8556973174304	72.31	0.82717	72.86	72.524	73.351	0.55008	-0.024606	-0.0010885	NaN	18.262	38	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	255300	+		44979	22657	30161	30174							0.11832491279551505
QIVLLVILL	9	Unmodified	_QIVLLVILL_					0	0	0		nc|ENSG00000064651|P55011-3|SLC12A2;ENSG00000064651|ENST00000262461|SLC12A2	nc|ENSG00000064651|P55011-3|SLC12A2	nc|ENSG00000064651|P55011-3|SLC12A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.3618774414062	2	512.362453	1022.71035	-0.052808	-2.7057E-05	-2.2805	-0.0011684	-2.3333	-0.0011955	512.3611914628581	74.266	1.3455	74.309	74.086	75.431	0.0429					113	47	3	0	0	0	0.76402	1	7124	7124		35.201	1.6851	1	281850			44980	1106	30162	30175	50919	50919					0.1999071497003797
QIVLLVILL	9	Unmodified	_QIVLLVILL_					0	0	0		nc|ENSG00000064651|P55011-3|SLC12A2;ENSG00000064651|ENST00000262461|SLC12A2	nc|ENSG00000064651|P55011-3|SLC12A2	nc|ENSG00000064651|P55011-3|SLC12A2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	512.362453	1022.71035	0.41772	0.00021403	-3.1432	-0.0016105	-2.7255	-0.0013965	512.3607745467801	73.557	1.6553	74.111	73.999	75.654	0.55386	-0.053321	-0.00089233	NaN	35.201	69	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	227640			44981	1106	30162	30175							0.1999071497003797
QIVQLKELFV	10	Unmodified	_QIVQLKELFV_					0	0	0			REV__nc|ENSG00000153827|Q14669-4|TRIP12	REV__nc|ENSG00000153827|Q14669-4|TRIP12	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2494812011719	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.77	1	116.75	116.25	117.25	-0.02433								0	0	0	0.45132	1	12937	12937		20.837	3.004	1		+		44982	20360	30163	30176	50920	50920					0.12347706642390222
QIVTLMVAPE	10	Unmodified	_QIVTLMVAPE_					0	0	0		ENST00000574186.1_1_17:5389953-5390326:+|nuORF	ENST00000574186.1_1_17:5389953-5390326:+|nuORF	ENST00000574186.1_1_17:5389953-5390326:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.806884765625	2	550.804642	1099.59473	0.24565	0.0001353	3.4438	0.0018969	3.6894	0.0020322	550.8063464981013	29.888	1.5118	29.799	29.104	30.616	-0.089546					94	34	5	0	0	0	0.64457	1	1886	1886		47.657	1.6851	1	1346500			44983	14032	30164	30177	50921	50921					0.04891823056868816
QIWLLPTR	8	Unmodified	_QIWLLPTR_					0	0	0			REV__ENST00000597095.5_1_19:19101856-19102289:-|nuORF	REV__ENST00000597095.5_1_19:19101856-19102289:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8089599609375	2	513.808377	1025.6022	0.14837	7.6233E-05	1.0682	0.00054883	1.2165	0.00062507	513.8088134492856	48.067	1.4161	48.057	47.714	49.13	-0.0093269					122	36	4	0	0	0	0.90089	1	3999	3999		39.253	3.6345	1	1557500	+		44984	29261	30165	30178	50922	50922					0.0904234343945518
QKAEMALLMM	10	Unmodified	_QKAEMALLMM_					0	0	0		ENSG00000089048|ENST00000617257|ESF1	ENSG00000089048|ENST00000617257|ESF1	ENSG00000089048|ENST00000617257|ESF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.2913818359375	2	583.29253	1164.57051	-0.4375	-0.00025519	-4.183	-0.0024399	-4.6205	-0.0026951	583.2914546218474	75.818	1.4306	76.386	75.46	76.89	0.56836					72	33	4	0	0	0	0.84112	1	8604	8604		37.159	0.71236	1	1497300			44985	1603	30166	30179	50923	50923					-0.005194766926706507
QKAGSRGL	8	Unmodified	_QKAGSRGL_					0	0	0		ENST00000590714.1_1_19:56110436-56110751:-|nuORF	ENST00000590714.1_1_19:56110436-56110751:-|nuORF	ENST00000590714.1_1_19:56110436-56110751:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.73944091796875	2	408.737951	815.46135	-0.071529	-2.9237E-05	4.315	0.0017637	4.2434	0.0017344	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.84341	1	1966	1966		24.203	1.1603	1	1654100			44986	14261	30167	30180	50924	50924					0.04623764786038009
QKAIRGIGT	9	Unmodified	_QKAIRGIGT_					0	0	0		ENST00000510502.1_1_4:79475627-79503447:+|nuORF;ENSG00000138772|ENST00000264908|ANXA3	ENST00000510502.1_1_4:79475627-79503447:+|nuORF	ENST00000510502.1_1_4:79475627-79503447:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2874755859375	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.78983	1	10550	10550		27.882	3.6795	1	50843000			44987	4332	30168	30181	50925	50925					0.08748582400005489
QKASKRHLLSA	11	Unmodified	_QKASKRHLLSA_					0	0	0			REV__ENSG00000096401|ENST00000371477|CDC5L	REV__ENSG00000096401|ENST00000371477|CDC5L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8692626953125	2	619.870028	1237.7255	-0.18236	-0.00011304	-0.59862	-0.00037106	-0.78097	-0.0004841	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.70737	1	9665	9665		30.318	2.4355	1	2627900	+		44988	17075	30169	30182	50926	50926					0.11614974819940471
QKASKRHLLSA	11	Unmodified	_QKASKRHLLSA_					0	0	0			REV__ENSG00000096401|ENST00000371477|CDC5L	REV__ENSG00000096401|ENST00000371477|CDC5L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8692626953125	2	619.870028	1237.7255	2.0624	0.0012784	-3.3055	-0.002049	-1.2431	-0.00077056	619.8678492982955	94.196	2.767	94.137	92.294	95.061	-0.059212					208	65	4	0	0	0	0.67778	1	10021	10021		35.152	3.6222	1	2061200	+		44989	17075	30169	30182	50927	50927					0.11614974819940471
QKASKRHLLSA	11	Unmodified	_QKASKRHLLSA_					0	0	0			REV__ENSG00000096401|ENST00000371477|CDC5L	REV__ENSG00000096401|ENST00000371477|CDC5L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8690795898438	2	619.870028	1237.7255	0.87762	0.00054401	-1.8204	-0.0011284	-0.94278	-0.0005844	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.70737	1	9789	9789		30.318	1.1477	1	6574700	+		44990	17075	30169	30182	50928	50928					0.11614974819940471
QKCAVDVLL	9	Unmodified	_QKCAVDVLL_					0	0	0			REV__nc|ENSG00000176160|Q4G112-2|HSF5	REV__nc|ENSG00000176160|Q4G112-2|HSF5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7796936035156	2	494.778428	987.542302	-0.075058	-3.7137E-05	3.6992	0.0018303	3.6241	0.0017931	494.7801083626478	84.098	2.6315	84.165	82.573	85.204	0.067001					119	60	3	0	0	0	0.74721	1	8407	8407		37.159	6.6555	1	230560	+		44991	22113	30170	30183	50929	50929					0.0480328471392113
QKEEAKREEEQ	11	Unmodified	_QKEEAKREEEQ_					0	0	0			REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2	REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.56500244140625	3	468.563555	1402.66884	-0.74961	-0.00035124	3.487	0.0016339	2.7374	0.0012826	468.5653557440957	53.503	1.4608	54.117	53.696	55.157	0.61436					114	34	6	0	0	0	0.42858	2	5396	5396;5469		57.149	12.509	1	11897000	+		44992	30147	30171	30184	50930;50931	50930					-0.016391623179060844
QKEIKALYTA	10	Unmodified	_QKEIKALYTA_					0	0	0		nc|ENSG00000130779|P30622-2|CLIP1;nc|ENSG00000130779|P30622-1|CLIP1;ENSG00000130779|ENST00000620786|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.8329467773438	2	582.834788	1163.65502	0.7163	0.00041749	-4.2997	-0.002506	-3.5834	-0.0020885	582.8322944715994	93.943	3.3707	94.171	93.279	96.65	0.22863					214	80	3	0	0	0	0.86348	1	9637	9637		31.53	3.6476	1	862210			44993	3684	30172	30185	50932	50932					0.07974256711622729
QKEIKKAYYQL	11	Unmodified	_QKEIKKAYYQL_					0	0	0		nc|ENSG00000103423|Q96EY1-2|DNAJA3;ENSG00000103423|ENST00000262375|DNAJA3;ENST00000573120.5_1_16:4476059-4487492:+|nuORF	nc|ENSG00000103423|Q96EY1-2|DNAJA3	nc|ENSG00000103423|Q96EY1-2|DNAJA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2720642089844	3	471.269643	1410.7871	0.66427	0.00031305	4.4322	0.0020888	5.0965	0.0024018	471.2716955726341	19.993	0.83779	19.524	19.113	19.95	-0.46967					50	17	4	0	0	0	0.67762	1	589	589		35.178	2.4277	1	690410			44994	2082	30173	30186	50933	50933					0.09813861728571283
QKEKKQGK	8	Unmodified	_QKEKKQGK_					0	0	0		ENST00000395442.5_1_10:55568369-55568990:-|nuORF	ENST00000395442.5_1_10:55568369-55568990:-|nuORF	ENST00000395442.5_1_10:55568369-55568990:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.29302978515625	2	487.293091	972.571629	0.71885	0.00035029	-0.76842	-0.00037445	-0.049573	-2.4157E-05	487.2926142390262	21.234	1.3308	21.217	20.618	21.949	-0.016428					149	64	4	0	0	0	0.065811	2	557	557;576		124.59	5.0374	1	2507800			44995	11094	30174	30187	50934;50935	50934					0.08424565054428967
QKEMVGLLVTR	11	Unmodified	_QKEMVGLLVTR_					0	0	0			REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.368896484375	2	637.368472	1272.72239	1.5361	0.00097909	1.6779	0.0010695	3.2141	0.0020485	637.3694440717433	105.45	2.1927	105.61	104.92	107.11	0.15924					169	54	4	0	0	0	0.74763	1	11296	11296		22.58	0.61977	1	2533600	+		44996	18513	30175	30188	50936	50936					0.0969396365094326
QKEVEAQQRLN	11	Unmodified	_QKEVEAQQRLN_					0	0	0			REV__ENSG00000166855|ENST00000300107|CLPX	REV__ENSG00000166855|ENST00000300107|CLPX	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.62298583984375	3	448.240635	1341.70008	0.42185	0.00018909	4.2594	0.0019092	4.6812	0.0020983	448.2442221256704	64.291	0.10835	64.415	64.33	64.438	0.12397					6	4	2	0	0	0	0.17363	1	5665	5665		19.627	0	1	23955	+		44997	21331	30176	30189	50937	50937					0.04289455506864215
QKEVQRLYHKL	11	Unmodified	_QKEVQRLYHKL_					0	0	0		ENSG00000135338|ENST00000369846|LCA5	ENSG00000135338|ENST00000369846|LCA5	ENSG00000135338|ENST00000369846|LCA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.28314208984375	3	481.280654	1440.82013	2.8229	0.0013586	4.1588	0.0020016	6.9817	0.0033602	481.2820387831268	102.84	2.0906	102.8	102.18	104.27	-0.047005					125	50	4	0	0	0	0.75121	1	11243	11243		21.78	0.74819	1	829310			44998	4008	30177	30190	50938	50938					0.1173548857127571
QKFFLRLSTK	10	Unmodified	_QKFFLRLSTK_					0	0	0			REV__chr5:70222015-70555218|14|29.93|0.38|6.29|-|1|GUSBP14,GUSBP15|1	REV__chr5:70222015-70555218|14|29.93|0.38|6.29|-|1|GUSBP14,GUSBP15|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.372314453125	2	634.379697	1266.74484	-1.1774	-0.00074694	-2.4387	-0.001547	-3.6161	-0.002294	634.3776223317757	111.13	0.41051	111.12	110.9	111.31	-0.0074387					40	17	3	0	0	0	0.85694	1	11853	11853		21.96	0	1	240410	+		44999	15862	30178	30191	50939	50939					0.12213931110841258
QKFGKDVKI	9	Unmodified	_QKFGKDVKI_					0	0	0		ENSG00000116005|ENST00000433351|PCYOX1	ENSG00000116005|ENST00000433351|PCYOX1	ENSG00000116005|ENST00000433351|PCYOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8171997070312	2	531.818941	1061.62333	-0.032225	-1.7138E-05	-3.6245	-0.0019276	-3.6567	-0.0019447	531.8169096298473	101.36	0.9939	101.39	101.01	102	0.031036					45	23	3	0	0	0	0.7932	1	10806	10806		21.96	1.4781	1	591860			45000	2892	30179	30192	50940	50940					0.09498308748334239
QKFLKILK	8	Unmodified	_QKFLKILK_					0	0	0		ENST00000381989.3_1_13:25009479-25009596:-|nuORF	ENST00000381989.3_1_13:25009479-25009596:-|nuORF	ENST00000381989.3_1_13:25009479-25009596:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.773681640625	2	509.344595	1016.67464	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.237	1	81.237	80.737	81.737	0								0	0	0	0.30784	1	7529	7529		14.664	0.88877	1				45001	10965	30180	30193	50941	50941					0.1669667751302768
QKFVVLPTGD	10	Unmodified	_QKFVVLPTGD_					0	0	0		ENSG00000127418|ENST00000510644|FGFRL1	ENSG00000127418|ENST00000510644|FGFRL1	ENSG00000127418|ENST00000510644|FGFRL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3057861328125	2	552.308406	1102.60226	-0.70613	-0.00039	-2.9091	-0.0016067	-3.6153	-0.0019967	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.44803	1	9696	9696		60.118	8.7828	1	1609500			45002	3496	30181	30194	50942	50942					0.055062986488110255
QKGAGGGA	8	Unmodified	_QKGAGGGA_					0	0	0			REV__ENSG00000088038|ENST00000221232|CNOT3	REV__ENSG00000088038|ENST00000221232|CNOT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.3521728515625	1	645.331464	644.324188	-0.38612	-0.00024917	3.7846	0.0024424	3.3985	0.0021932	645.333812215403	66.829	0.73917	66.881	66.346	67.085	0.052376					41	33	2	0	0	0	0.86294	1	5875	5875		8.8223	0	1	147420	+		45003	16937	30182	30195	50943	50943					-0.01220144093520048
QKGAGGGA	8	Unmodified	_QKGAGGGA_					0	0	0			REV__ENSG00000088038|ENST00000221232|CNOT3	REV__ENSG00000088038|ENST00000221232|CNOT3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		1	645.331464	644.324188	0.45254	0.00029204	2.4786	0.0015995	2.9312	0.0018916	645.333079181927	67.26	1.958	67.289	66.351	68.309	0.02858	0.26102	0.00019682	NaN	8.8223	131	84	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	155920	+		45004	16937	30182	30195							-0.01220144093520048
QKGAGGGA	8	Unmodified	_QKGAGGGA_					0	0	0			REV__ENSG00000088038|ENST00000221232|CNOT3	REV__ENSG00000088038|ENST00000221232|CNOT3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		1	645.331464	644.324188	1.542	0.00099507	1.2904	0.00083276	2.8324	0.0018278	645.3325212861381	66.78	1.9974	66.913	66.451	68.449	0.13326	-0.11463	-0.00056996	NaN	8.8223	113	80	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123780	+		45005	16937	30182	30195							-0.01220144093520048
QKGHAPCS	8	Unmodified	_QKGHAPCS_					0	0	0		ENSG00000119681|ENST00000261978|LTBP2	ENSG00000119681|ENST00000261978|LTBP2	ENSG00000119681|ENST00000261978|LTBP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.23773193359375	2	414.195062	826.375571	-0.18762	-7.7713E-05	3.2191	0.0013333	3.0315	0.0012556	414.19695510010706	79.226	0.31345	79.286	79.172	79.485	0.059349					11	8	2	0	0	0	0.4196	1	7737	7737		17.365	0	1	64185			45006	3085	30183	30196	50944	50944					-0.04456143391121259
QKGKALPLSSA	11	Unmodified	_QKGKALPLSSA_					0	0	0		nc|ENSG00000100697|Q9UPY3-2|DICER1;ENSG00000100697|ENST00000343455|DICER1;ENST00000556045.5_1_14:95570385-95572406:-|nuORF	nc|ENSG00000100697|Q9UPY3-2|DICER1	nc|ENSG00000100697|Q9UPY3-2|DICER1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.3280029296875	2	550.327131	1098.63971	-0.4914	-0.00027043	0.44675	0.00024586	-0.044654	-2.4574E-05	550.3274966608972	100.46	1.192	100.46	99.887	101.08	0					71	27	3	0	0	0	0.73893	1	10198	10198		24.519	0.31644	1	339490			45007	14817	30184	30197	50945	50945					0.09433389914443069
QKGLKGKVY	9	Unmodified	_QKGLKGKVY_					0	0	0		nc|ENSG00000172116|P10966-9|CD8B	nc|ENSG00000172116|P10966-9|CD8B	nc|ENSG00000172116|P10966-9|CD8B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8135986328125	2	510.813659	1019.61277	0.51454	0.00026283	-2.3882	-0.0012199	-1.8736	-0.00095708	510.81241665464495	79.725	0.8467	80.274	79.871	80.718	0.54945					42	19	3	0	0	0	0.72402	1	9168	9168		38.806	5.2906	1	928830			45008	15096	30185	30198	50946	50946					0.10374326093904074
QKGLKGKVY	9	Unmodified	_QKGLKGKVY_					0	0	0		nc|ENSG00000172116|P10966-9|CD8B	nc|ENSG00000172116|P10966-9|CD8B	nc|ENSG00000172116|P10966-9|CD8B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	510.813659	1019.61277	-0.37668	-0.00019242	-1.0693	-0.00054621	-1.446	-0.00073863	510.8127189347056	79.824	0.54854	79.955	79.678	80.227	0.13085	-0.17996	0.00070331	NaN	38.806	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72205			45009	15096	30185	30198							0.10374326093904074
QKGLKGKVY	9	Unmodified	_QKGLKGKVY_					0	0	0		nc|ENSG00000172116|P10966-9|CD8B	nc|ENSG00000172116|P10966-9|CD8B	nc|ENSG00000172116|P10966-9|CD8B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	510.813659	1019.61277	-1.2987	-0.00066339	0.20823	0.00010637	-1.0905	-0.00055703	510.8133389205919	80.009	0.54312	80.108	79.915	80.459	0.098694	-0.026647	0.0020085	NaN	38.806	28	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86361			45010	15096	30185	30198							0.10374326093904074
QKGLKGKVY	9	Unmodified	_QKGLKGKVY_					0	0	0		nc|ENSG00000172116|P10966-9|CD8B	nc|ENSG00000172116|P10966-9|CD8B	nc|ENSG00000172116|P10966-9|CD8B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	510.813659	1019.61277	0.015549	7.9427E-06	-1.5754	-0.00080471	-1.5598	-0.00079677	510.81274494297406	79.844	0.93144	80.26	79.785	80.716	0.41621	0.12522	0.00018631	NaN	38.806	37	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1134200			45011	15096	30185	30198							0.10374326093904074
QKGLNRAAS	9	Unmodified	_QKGLNRAAS_					0	0	0		nc|ENSG00000137204|Q9Y694-3|SLC22A7;nc|ENSG00000137204|Q9Y694-2|SLC22A7;ENSG00000137204|ENST00000372585|SLC22A7	nc|ENSG00000137204|Q9Y694-3|SLC22A7	nc|ENSG00000137204|Q9Y694-3|SLC22A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7672119140625	2	472.76724	943.519927	-0.10807	-5.1094E-05	0.17013	8.0433E-05	0.062057	2.9339E-05	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.76255	1	8392	8392		35.618	2.1027	1	501240			45012	4179	30186	30199	50947	50947					0.045908213605116543
QKGLQRTL	8	Unmodified	_QKGLQRTL_					0	0	0		ENSG00000105738|ENST00000222345|SIPA1L3	ENSG00000105738|ENST00000222345|SIPA1L3	ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28765869140625	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.86677	1	10041	10041		27.882	2.3082	1	40161000			45013	2249	30187	30200	50948	50948					0.08748582400005489
QKGVQDKTGK	10	Unmodified	_QKGVQDKTGK_					0	0	0		ENSG00000168334|ENST00000340369|XIRP1;nc|ENSG00000168334|Q702N8-3|XIRP1	ENSG00000168334|ENST00000340369|XIRP1	ENSG00000168334|ENST00000340369|XIRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.805419921875	2	544.806562	1087.59857	0.89236	0.00048616	-0.53961	-0.00029398	0.35275	0.00019218	544.8060221408508	25.027	0.54818	24.99	24.754	25.302	-0.037178					22	12	2	0	0	0	0.63899	2	968	957;968		47.96	2.55	1	67634			45014	6394	30188	30201	50949;50950	50950					0.05827628874953916
QKHLGLHK	8	Unmodified	_QKHLGLHK_					0	0	0		ENSG00000146070|ENST00000274793|PLA2G7	ENSG00000146070|ENST00000274793|PLA2G7	ENSG00000146070|ENST00000274793|PLA2G7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.78948974609375	2	480.790518	959.566484	1.0926	0.00052533	-2.7117	-0.0013038	-1.6191	-0.00077843	480.7890454445309	23.31	0.54122	22.909	22.593	23.135	-0.40058					27	12	3	0	0	0	0.87922	1	1028	1028		31.955	4.0726	1	89531			45015	4817	30189	30202	50951	50951					0.085083059824683
QKIAITHKNK	10	Unmodified	_QKIAITHKNK_					0	0	0		ENST00000583772.1_1_17:73016361-73017097:+|nuORF;ENSG00000167862|ENST00000301585|MRPL58	ENST00000583772.1_1_17:73016361-73017097:+|nuORF	ENST00000583772.1_1_17:73016361-73017097:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8666381835938	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.5766	3	11456	11432;11444;11456		51.335	12.529	1	52150000			45016	6334	30190	30203	50952;50953;50954	50954					0.12612473933972979
QKIATVTIVF	10	Unmodified	_QKIATVTIVF_					0	0	0			REV__ENSG00000058063|ENST00000323116|ATP11B;REV__ENST00000459908.5_1_13:113439469-113512287:+|nuORF	REV__ENST00000459908.5_1_13:113439469-113512287:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3407592773438	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.86471	1	12659	12659		30.318	8.632	1	4071000	+		45017	16561;16432	30191	30204	50955	50955					0.1153574857962667
QKIILPRSRV	10	Unmodified	_QKIILPRSRV_					0	0	0		nc|ENSG00000119703|Q53FD0-2|ZC2HC1C;ENSG00000119703|ENST00000524913|ZC2HC1C	nc|ENSG00000119703|Q53FD0-2|ZC2HC1C	nc|ENSG00000119703|Q53FD0-2|ZC2HC1C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9299621582031	3	403.931185	1208.77173	-1.8895	-0.00076324	-2.2243	-0.00089846	-4.1138	-0.0016617	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.8573	1	3563	3563		16.007	2.4988	1	2300300			45018	3090	30192	30205	50956	50956					0.17569039722025082
QKIIQRHLQ	9	Unmodified	_QKIIQRHLQ_					0	0	0		ENST00000519480.5_1_8:6266832-6272313:+|nuORF	ENST00000519480.5_1_8:6266832-6272313:+|nuORF	ENST00000519480.5_1_8:6266832-6272313:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3538818359375	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.78058	1	12517	12517		30.504	0	1	3937500			45019	13135	30193	30206	50957	50957					0.11863607136797327
QKILKKEKSD	10	Unmodified	_QKILKKEKSD_					0	0	0		nc|ENSG00000229089|Q5CZ79|ANKRD20A8P;ENST00000432432.6_1_2:95480778-95522914:-|nuORF	nc|ENSG00000229089|Q5CZ79|ANKRD20A8P	nc|ENSG00000229089|Q5CZ79|ANKRD20A8P	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24774169921875	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.562	1	15.478	14.978	15.978	-0.083363								0	0	0	0.45132	1	56	56		26.063	3.5018	1				45020	11667	30194	30207	50958	50958					0.1194561714869451
QKINDWIK	8	Unmodified	_QKINDWIK_					0	0	0		nc|ENSG00000135241|Q9NP80-3|PNPLA8;nc|ENSG00000135241|Q9NP80-2|PNPLA8;ENSG00000135241|ENST00000257694|PNPLA8	nc|ENSG00000135241|Q9NP80-3|PNPLA8	nc|ENSG00000135241|Q9NP80-3|PNPLA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.7941284179688	2	522.795466	1043.57638	0.077043	4.0278E-05	-4.0165	-0.0020998	-3.9394	-0.0020595	522.7932298193799	22.078	0.91792	21.467	21.072	21.99	-0.6107					46	22	4	0	0	0	0.53378	1	881	881		74.255	7.8258	1	468110			45021	3994	30195	30208	50959	50959					0.05633449197171103
QKIRVQAK	8	Unmodified	_QKIRVQAK_					0	0	0			REV__ENSG00000111249|ENST00000261726|CUX2	REV__ENSG00000111249|ENST00000261726|CUX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.8121337890625	2	485.811451	969.608348	0.58397	0.0002837	-0.95253	-0.00046275	-0.36856	-0.00017905	485.81082797558173	17.666	0.24058	17.183	16.991	17.232	-0.48256					11	5	3	0	0	0	0.91005	1	289	289		42.474	0.078325	1	66259	+		45022	17854	30196	30209	50960	50960					0.12232861670986495
QKKAIKKERQ	10	Unmodified	_QKKAIKKERQ_					0	0	0		ENST00000475065.5_1_7:102953018-102963086:-|nuORF;nc|ENSG00000105821|Q99543-2|DNAJC2;ENSG00000105821|ENST00000379263|DNAJC2	ENST00000475065.5_1_7:102953018-102963086:-|nuORF	ENST00000475065.5_1_7:102953018-102963086:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.5996398925781	3	419.598094	1255.77245	0.96458	0.00040474	2.9043	0.0012187	3.8689	0.0016234	419.5991830900443	24.354	1.3422	23.972	23.576	24.918	-0.38178					72	27	4	0	0	0	0.42808	2	1169	1169;1194		61.765	14.81	1	726260			45023	2254	30197	30210	50961;50962	50961					0.1547983437108087
QKKAIKKERQ	10	Unmodified	_QKKAIKKERQ_					0	0	0		ENST00000475065.5_1_7:102953018-102963086:-|nuORF;nc|ENSG00000105821|Q99543-2|DNAJC2;ENSG00000105821|ENST00000379263|DNAJC2	ENST00000475065.5_1_7:102953018-102963086:-|nuORF	ENST00000475065.5_1_7:102953018-102963086:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.59954833984375	3	419.598094	1255.77245	1.7793	0.00074657	1.9244	0.00080747	3.7036	0.001554	419.5987701797605	24.325	1.1367	23.811	23.408	24.544	-0.51365					65	23	4	0	0	0	0.65251	1	1165	1165		47.228	10.274	1	934580			45024	2254	30197	30210	50963	50963					0.1547983437108087
QKKALFRKIRF	11	Unmodified	_QKKALFRKIRF_					0	0	0			REV__ENSG00000198918|ENST00000361575|RPL39	REV__ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3091125488281	3	478.973384	1433.89832	-0.69274	-0.0003318	2.9962	0.0014351	2.3035	0.0011033	478.9746813820608	49.583	2.3312	49.559	48.401	50.732	-0.024033					111	53	3	0	0	0	0.79476	1	4382	4382		12.433	4.0256	1	142150	+		45025	23414	30198	30211	50964	50964					0.19872965947138255
QKKALFRKIRF	11	Unmodified	_QKKALFRKIRF_					0	0	0			REV__ENSG00000198918|ENST00000361575|RPL39	REV__ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3091735839844	3	478.973384	1433.89832	0.32204	0.00015425	2.3016	0.0011024	2.6237	0.0012567	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.8498	1	3769	3769		6.001	0	1	307830	+		45026	23414	30198	30211	50965	50965					0.19872965947138255
QKKANSLARLA	11	Unmodified	_QKKANSLARLA_					0	0	0		ENSG00000070444|ENST00000174618|MNT	ENSG00000070444|ENST00000174618|MNT	ENSG00000070444|ENST00000174618|MNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5811462402344	3	400.578811	1198.7146	3.1807	0.0012741	1.1216	0.00044928	4.3022	0.0017234	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.69687	1	12521	12521		32.034	1.4653	1	88404			45027	1242	30199	30212	50966	50966					0.12319572445653648
QKKANSLARLA	11	Unmodified	_QKKANSLARLA_					0	0	0		ENSG00000070444|ENST00000174618|MNT	ENSG00000070444|ENST00000174618|MNT	ENSG00000070444|ENST00000174618|MNT	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	400.578811	1198.7146	2.7175	0.0010886	1.4494	0.00058061	4.167	0.0016692	400.9139207578905	114.7	0.29166	114.68	114.57	114.86	-0.024452	0.016783	0.00032164	NaN	32.034	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63094			45028	1242	30199	30212							0.12319572445653648
QKKLSCSLEDL	11	Unmodified	_QKKLSCSLEDL_					0	0	0		nc|ENSG00000166387|Q8ND30-3|PPFIBP2;nc|ENSG00000166387|Q8ND30-2|PPFIBP2;ENSG00000166387|ENST00000299492|PPFIBP2	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.89208984375	3	421.891956	1262.65404	0.086923	3.6672E-05	-1.5715	-0.00066299	-1.4845	-0.00062632	421.8912283543651	28.979	0.91446	29.091	28.756	29.67	0.11225					126	46	4	0	0	0	0.52654	1	1196	1196		50.034	15.947	1	973080			45029	6187	30200	30213	50967	50967					0.03321674280391562
QKKQLAQDT	9	Unmodified	_QKKQLAQDT_					0	0	0		nc|ENSG00000143995|O00470-2|MEIS1;ENSG00000143995|ENST00000272369|MEIS1;nc|ENSG00000134138|O14770-8|MEIS2;nc|ENSG00000134138|O14770-4|MEIS2;nc|ENSG00000105419|Q99687-2|MEIS3;nc|ENSG00000134138|O14770-2|MEIS2;nc|ENSG00000134138|O14770-3|MEIS2;nc|ENSG00000134138|O14770-7|MEIS2;ENST00000409517.5_1_2:66688993-66796237:+|nuORF;ENST00000561204.5_1_19:47909736-47921444:-|nuORF;ENSG00000105419|ENST00000558555|MEIS3;nc|ENSG00000105419|Q99687-3|MEIS3;nc|ENSG00000134138|O14770-6|MEIS2;nc|ENSG00000179277|A6NDR6|MEIS3P1;ENST00000606455.5_1_2:66670102-66794607:+|nuORF;ENSG00000134138|ENST00000561208|MEIS2	nc|ENSG00000143995|O00470-2|MEIS1	nc|ENSG00000143995|O00470-2|MEIS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2921752929688	2	530.293288	1058.57202	-1.5163	-0.00080409	1.7205	0.00091237	0.2042	0.00010828	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.77546	1	9205	9205		31.955	0	1	1686700			45030	4682	30201	30214	50968	50968					0.04507939983614051
QKKRKLIL	8	Unmodified	_QKKRKLIL_					0	0	0		ENST00000472669.5_1_6:108365991-108372269:-|nuORF;ENSG00000081087|ENST00000193322|OSTM1	ENST00000472669.5_1_6:108365991-108372269:-|nuORF	ENST00000472669.5_1_6:108365991-108372269:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.86279296875	2	513.860944	1025.70733	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.158	1	73.289	72.789	73.789	0.13064								0	0	0	0.29498	1	6741	6741		26.796	0	1				45031	1460	30202	30215	50969	50969					0.19550884635896182
QKKSAPLEE	9	Unmodified	_QKKSAPLEE_					0	0	0			REV__nc|ENSG00000148773|P46013-2|MKI67	REV__nc|ENSG00000148773|P46013-2|MKI67	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2722778320312	2	515.282389	1028.55022	-0.48675	-0.00025081	-0.22723	-0.00011709	-0.71398	-0.0003679	515.2824401583275	48.493	0.4859	48.962	48.708	49.194	0.46941					15	11	2	0	0	0	0.20789	1	4707	4707		45.972	0	1	181820	+		45032	15466	30203	30216	50970	50970					0.03709135235044414
QKKSSVRHKL	10	Unmodified	_QKKSSVRHKL_					0	0	0		ENST00000481328.7_1_11:76890894-76905079:+|nuORF;nc|ENSG00000137474|Q13402-5|MYO7A;nc|ENSG00000137474|Q13402-8|MYO7A;nc|ENSG00000137474|Q13402-2|MYO7A;nc|ENSG00000137474|Q13402-7|MYO7A;ENSG00000137474|ENST00000409709|MYO7A;nc|ENSG00000137474|Q13402-3|MYO7A;nc|ENSG00000137474|Q13402-4|MYO7A	ENST00000481328.7_1_11:76890894-76905079:+|nuORF	ENST00000481328.7_1_11:76890894-76905079:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.8720092773438	2	605.872571	1209.73059	2.969	0.0017988	-3.6283	-0.0021983	-0.65929	-0.00039945	605.8701685265158	100.36	1.5776	100.31	99.825	101.4	-0.052109					123	36	5	0	0	0	0.86348	1	10938	10938		31.53	5.9558	1	1633200			45033	4202	30204	30217	50971	50971					0.13411278682565353
QKKVKKPKPEF	11	Unmodified	_QKKVKKPKPEF_					0	0	0		ENSG00000136770|ENST00000376980|DNAJC1;chr10:21882434-21918779|30|18.0|0.49|5.2|-|0|None,DNAJC1|1	ENSG00000136770|ENST00000376980|DNAJC1	ENSG00000136770|ENST00000376980|DNAJC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.9481506347656	3	452.950245	1355.82891	-1.1932	-0.00054047	-3.3468	-0.0015159	-4.54	-0.0020564	452.9486366147782	106.8	1.2296	106.95	106.47	107.7	0.14843					124	29	6	0	0	0	0.75121	1	11415	11415		21.78	0	1	8171700			45034	4136	30205	30218	50972	50972					0.16522462207740318
QKLECQDII	9	Unmodified	_QKLECQDII_					0	0	0		nc|ENSG00000163535|Q562F6-2|SGO2;ENSG00000163535|ENST00000357799|SGO2	nc|ENSG00000163535|Q562F6-2|SGO2	nc|ENSG00000163535|Q562F6-2|SGO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.2819213867188	2	545.284074	1088.5536	0.073676	4.0174E-05	-3.1367	-0.0017104	-3.0631	-0.0016702	545.2822083486135	51.033	2.1058	51.009	50.553	52.659	-0.023426					133	56	4	0	0	0	0.76255	1	4522	4522		35.618	1.4457	1	2515900			45035	5819	30206	30219	50973	50973					0.012860620173796633
QKLEQEAQK	9	Unmodified	_QKLEQEAQK_					0	0	0		ENSG00000206562|ENST00000383790|METTL6;nc|ENSG00000206562|Q8TCB7-2|METTL6	ENSG00000206562|ENST00000383790|METTL6	ENSG00000206562|ENST00000383790|METTL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.300537109375	2	551.29857	1100.58259	0.35595	0.00019624	-0.023637	-1.3031E-05	0.33232	0.00018321	551.2983762488637	32.057	0.54276	32.006	31.778	32.32	-0.051033					20	11	2	0	0	0	0.77244	1	1865	1865		32.812	4.9302	1	55560			45036	8563	30207	30220	50974	50974					0.03631922638032847
QKLGLLDCV	9	Unmodified	_QKLGLLDCV_					0	0	0		nc|ENSG00000159337|Q86XP0-2|PLA2G4D;ENSG00000159337|ENST00000290472|PLA2G4D	nc|ENSG00000159337|Q86XP0-2|PLA2G4D	nc|ENSG00000159337|Q86XP0-2|PLA2G4D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.78009033203125	2	494.778428	987.542302	1.0619	0.0005254	2.8604	0.0014153	3.9223	0.0019407	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.69914	1	8971	8971		40.573	6.4001	1	657500			45037	5523	30208	30221	50975	50975					0.0480328471392113
QKLGLLDCV	9	Unmodified	_QKLGLLDCV_					0	0	0		nc|ENSG00000159337|Q86XP0-2|PLA2G4D;ENSG00000159337|ENST00000290472|PLA2G4D	nc|ENSG00000159337|Q86XP0-2|PLA2G4D	nc|ENSG00000159337|Q86XP0-2|PLA2G4D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.78021240234375	2	494.778428	987.542302	-0.60525	-0.00029947	4.2344	0.0020951	3.6291	0.0017956	494.7803656183054	83.829	2.2213	83.994	82.644	84.865	0.1651					103	51	3	0	0	0	0.67345	1	8084	8084		42.396	6.7778	1	285340			45038	5523	30208	30221	50976	50976					0.0480328471392113
QKLIAIMTT	9	Unmodified	_QKLIAIMTT_					0	0	0			REV__ENSG00000147251|ENST00000276202|DOCK11	REV__ENSG00000147251|ENST00000276202|DOCK11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8035888671875	2	509.801903	1017.58925	-0.054506	-2.7787E-05	3.6278	0.0018495	3.5733	0.0018217	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.72402	1	8459	8459		38.806	0.99462	1	828920	+		45039	20062	30209	30222	50977	50977					0.08116144265068215
QKLIAIMTT	9	Unmodified	_QKLIAIMTT_					0	0	0			REV__ENSG00000147251|ENST00000276202|DOCK11	REV__ENSG00000147251|ENST00000276202|DOCK11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.80364990234375	2	509.801903	1017.58925	0.22319	0.00011378	3.3375	0.0017014	3.5607	0.0018152	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.74721	1	8927	8927		37.159	1.9584	1	3453000	+		45040	20062	30209	30222	50978	50978					0.08116144265068215
QKLIAIMTT	9	Unmodified	_QKLIAIMTT_					0	0	0			REV__ENSG00000147251|ENST00000276202|DOCK11	REV__ENSG00000147251|ENST00000276202|DOCK11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8033447265625	2	509.801903	1017.58925	-0.38177	-0.00019462	3.8836	0.0019799	3.5019	0.0017853	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.64922	1	8219	8219		44.117	0	1	948010	+		45041	20062	30209	30222	50979	50979					0.08116144265068215
QKLKGKTPPI	10	Unmodified	_QKLKGKTPPI_					0	0	0		ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.3533325195312	2	555.355691	1108.69683	-0.45068	-0.00025029	-3.7051	-0.0020576	-4.1558	-0.0023079	555.3535032243398	101.3	2.2254	101.3	100.77	103	0					164	54	4	0	0	0	0.64457	2	10371	10371;10384		47.657	17.293	1	2945100			45042	3811	30210	30223	50980;50981	50980					0.14682857190791765
QKLKGKTPPI	10	Unmodified	_QKLKGKTPPI_					0	0	0		ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.3533325195312	2	555.355691	1108.69683	-0.86355	-0.00047958	-3.4797	-0.0019325	-4.3433	-0.0024121	555.3536421650435	101.16	2.3681	101.19	100.7	103.07	0.031036					166	56	5	0	0	0	0.6116	3	10816	10816;10865;10889		49.442	5.1146	1	6361400			45043	3811	30210	30223	50982;50983;50984	50982					0.14682857190791765
QKLKGKTPPI	10	Unmodified	_QKLKGKTPPI_					0	0	0		ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.353271484375	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.80179	2	10594	10594;10606		39.253	10.083	1	5963400			45044	3811	30210	30223	50985;50986	50985					0.14682857190791765
QKLKKLPPGG	10	Unmodified	_QKLKKLPPGG_					0	0	0			REV__nc|ENSG00000166886|Q15742-3|NAB2	REV__nc|ENSG00000166886|Q15742-3|NAB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.340087890625	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.86201	1	10539	10539		24.203	0.68005	1	2530900	+		45045	21333	30211	30224	50987	50987					0.1408658801931324
QKLLALDPSPL	11	Unmodified	_QKLLALDPSPL_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.855712890625	2	597.858264	1193.70197	0.8216	0.0004912	-4.2474	-0.0025393	-3.4258	-0.0020481	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.64498	1	9399	9399		39.253	2.8061	1	2486400			45046	7573	30212	30225	50988	50988					0.11287116262769814
QKLLEDPVLAL	11	Unmodified	_QKLLEDPVLAL_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8692016601562	2	619.871371	1237.72819	-0.18235	-0.00011304	-2.7647	-0.0017137	-2.947	-0.0018268	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.69995	1	9653	9653		31.53	2.3598	1	2627900	+		45047	16905	30213	30226	50989	50989					0.11883385434225602
QKLLEDPVLAL	11	Unmodified	_QKLLEDPVLAL_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8689575195312	2	619.871371	1237.72819	0.62246	0.00038584	-4.0064	-0.0024835	-3.384	-0.0020976	619.8687823008486	94.059	2.9324	94.104	92.154	95.087	0.045448					223	69	4	0	0	0	0.5603	2	9955	9930;9955		47.657	1.6851	1	2371600	+		45048	16905	30213	30226	50990;50991	50991					0.11883385434225602
QKLLEDPVLAL	11	Unmodified	_QKLLEDPVLAL_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8694458007812	2	619.871371	1237.72819	0.87762	0.00054401	-3.9864	-0.0024711	-3.1088	-0.0019271	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.63176	1	9919	9919		40.778	6.6056	1	6574700	+		45049	16905	30213	30226	50992	50992					0.11883385434225602
QKLLEDPVLAL	11	Unmodified	_QKLLEDPVLAL_					0	0	0			REV__ENSG00000086015|ENST00000361297|MAST2	REV__ENSG00000086015|ENST00000361297|MAST2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.869384765625	2	619.871371	1237.72819	-1.2246	-0.00075909	-1.8945	-0.0011743	-3.1191	-0.0019334	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.63176	2	9813	9719;9813		40.778	9.2484	1	6224400	+		45050	16905	30213	30226	50993;50994	50994					0.11883385434225602
QKLLEKELKL	10	Unmodified	_QKLLEKELKL_					0	0	0			REV__ENSG00000110321|ENST00000339995|EIF4G2	REV__ENSG00000110321|ENST00000339995|EIF4G2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.392578125	2	621.395013	1240.77547	-0.078752	-4.8936E-05	-3.5843	-0.0022272	-3.663	-0.0022762	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.86348	1	10762	10762		31.53	0	1	10411000	+		45051	17807	30214	30227	50995	50995					0.1647166470522734
QKLLGIAM	8	Unmodified	_QKLLGIAM_					0	0	0		ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2649841308594	2	437.264956	872.515359	0.051124	2.2355E-05	1.2114	0.00052972	1.2626	0.00055208	437.26563820123806	25.538	2.1653	25.281	24.501	26.666	-0.25721					170	48	6	0	0	0	0.80706	1	1466	1466		19.36	0	1	21512000			45052	8159	30215	30228	50996	50996					0.0740022089340755
QKLLPMGN	8	Unmodified	_QKLLPMGN_					0	0	0			REV__nc|ENSG00000198589|P50851-2|LRBA	REV__nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7549133300781	2	450.752213	899.489873	0.78549	0.00035406	3.5542	0.0016021	4.3397	0.0019561	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.86288	1	7992	7992		26.796	0	1	420760	+		45053	23342	30216	30229	50997	50997					0.036107463709754484
QKLPPPSLLSA	11	Unmodified	_QKLPPPSLLSA_					0	0	0			REV__ENST00000378103.7_3_9:35748784-35748955:-|nuORF	REV__ENST00000378103.7_3_9:35748784-35748955:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8429565429688	2	575.845156	1149.67576	-0.99734	-0.00057431	-2.9254	-0.0016846	-3.9227	-0.0022589	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.69995	1	9755	9755		31.53	1.0262	1	5638300	+		45054	25888	30217	30230	50998	50998					0.10690847091314026
QKLRKAPVKFA	11	Unmodified	_QKLRKAPVKFA_					0	0	0		nc|ENSG00000116127|Q8TCU4-2|ALMS1;ENSG00000116127|ENST00000613296|ALMS1;nc|ENSG00000116127|Q8TCU4-3|ALMS1	nc|ENSG00000116127|Q8TCU4-2|ALMS1	nc|ENSG00000116127|Q8TCU4-2|ALMS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4043579101562	2	643.408789	1284.80303	0.024155	1.5542E-05	-4.3274	-0.0027843	-4.3033	-0.0027688	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.7342	1	11115	11115		25.574	2.0514	1	11188000			45055	2899	30218	30231	50999	50999					0.17201612756116447
QKLSLQRRRWY	11	Unmodified	_QKLSLQRRRWY_					0	0	0			REV__nc|ENSG00000003096|Q9P2N7-5|KLHL13	REV__nc|ENSG00000003096|Q9P2N7-5|KLHL13	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.7691040039062	3	511.963548	1532.86881	0.24981	0.00012789	1.6006	0.00081947	1.8505	0.00094737	511.9646335919719	38.143	0.15548	38.238	38.184	38.34	0.094318					7	5	2	0	0	0	0.17863	1	2252	2252		19.263	5.7547	1	26688	+		45056	29666	30219	30232	51000	51000					0.12369401931027824
QKLVNHVRV	9	Unmodified	_QKLVNHVRV_					0	0	0			REV__ENST00000393321.2_3_2:109102933-109106471:+|nuORF	REV__ENST00000393321.2_3_2:109102933-109106471:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8411865234375	2	546.835457	1091.65636	3.386	0.0018516	4.2852	0.0023433	7.6712	0.0041949	546.8379771318001	101.02	3.777	100.97	100.36	104.13	-0.052116					284	90	6	0	0	0	0.7932	1	11274	11274		25.45	0	1	39176000	+		45057	19275	30220	30233	51001	51001					0.11419935591038666
QKLVVLFHLQ	10	Unmodified	_QKLVVLFHLQ_					0	0	0			REV__ENST00000404488.7_1_22:50319154-50321136:+|nuORF	REV__ENST00000404488.7_1_22:50319154-50321136:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	613.3831176757812	2	612.876791	1223.73903	0.91302	0.00055957	3.4829	0.0021346	4.3959	0.0026941	612.8787003590065	104.47	3.5452	104.58	103.94	107.49	0.11684					293	87	6	0	0	0	0.74274	1	11044	11044		42.396	4.5846	1	81912000	+		45058	26283	30221	30234	51002	51002					0.13610832599169953
QKMGRRMLT	9	Unmodified	_QKMGRRMLT_					0	0	0			REV__nc|ENSG00000107186|O75970-5|MPDZ	REV__nc|ENSG00000107186|O75970-5|MPDZ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.9725341796875	2	560.807528	1119.6005	0.18039	0.00010117	2.2934	0.0012861	2.4738	0.0013873	560.8085489100418	27.265	0.40035	27.09	26.837	27.237	-0.17559					12	8	2	0	0	0	0.20789	1	1542	1542		19.104	0	1	45584	+		45059	17649	30222	30235	51003	51003					0.04548643087559867
QKMLQVAL	8	Unmodified	_QKMLQVAL_					0	0	0			REV__nc|ENSG00000153827|Q14669-4|TRIP12	REV__nc|ENSG00000153827|Q14669-4|TRIP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.777587890625	2	465.775688	929.536823	-0.22002	-0.00010248	4.439	0.0020676	4.2189	0.0019651	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.86791	1	9457	9457		28.254	1.4582	1	1042300	+		45060	20360	30223	30236	51004	51004					0.06923605922111165
QKMRSKPATG	10	Unmodified	_QKMRSKPATG_					0	0	0		nc|ENSG00000106344|Q9NW13-2|RBM28;ENSG00000106344|ENST00000223073|RBM28	nc|ENSG00000106344|Q9NW13-2|RBM28	nc|ENSG00000106344|Q9NW13-2|RBM28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3063354492188	2	552.303133	1102.59171	2.2801	0.0012593	3.7508	0.0020716	6.0309	0.0033309	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.8608	1	9836	9836		34.173	1.3601	1	1797400			45061	2290	30224	30237	51005	51005					0.044519927227156586
QKNFMNILEK	10	Unmodified	_QKNFMNILEK_					0	0	0		ENST00000287396.2_1_8:124515615-124544254:-|nuORF;ENSG00000156804|ENST00000517956|FBXO32;ENST00000521719.5_1_8:124526414-124553254:-|nuORF	ENST00000287396.2_1_8:124515615-124544254:-|nuORF	ENST00000287396.2_1_8:124515615-124544254:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2310485839844	3	422.228791	1263.66454	0.85489	0.00036096	4.4698	0.0018873	5.3246	0.0022482	422.2306179141909	33.441	0.79545	33.611	33.314	34.109	0.16971					47	18	4	0	0	0	0.81117	1	2414	2414		38.754	3.5754	1	946230			45062	9657	30225	30238	51006	51006					0.04325701725474573
QKNKSLVETG	10	Unmodified	_QKNKSLVETG_					0	0	0			REV__ENST00000578846.5_1_17:80017806-80018124:-|nuORF	REV__ENST00000578846.5_1_17:80017806-80018124:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3065185546875	2	552.306395	1102.59824	2.2801	0.0012593	-2.1564	-0.001191	0.1237	6.8322E-05	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.82886	2	9786	9775;9786		37.812	3.8899	1	1797400	+		45063	21597	30226	30239	51007;51008	51008					0.05104209155092576
QKNKSLVETG	10	Unmodified	_QKNKSLVETG_					0	0	0			REV__ENST00000578846.5_1_17:80017806-80018124:-|nuORF	REV__ENST00000578846.5_1_17:80017806-80018124:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3064575195312	2	552.306395	1102.59824	0.26261	0.00014504	-0.18156	-0.00010027	0.081052	4.4766E-05	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.54701	1	9384	9384		52.937	10.072	1	1950800	+		45064	21597	30226	30239	51009	51009					0.05104209155092576
QKNNKRKKRKK	11	Unmodified	_QKNNKRKKRKK_					0	0	0		ENST00000370779.8_1_X:134030894-134030957:-|nuORF	ENST00000370779.8_1_X:134030894-134030957:-|nuORF	ENST00000370779.8_1_X:134030894-134030957:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	485.3213195800781	3	485.982942	1454.927	0.72462	0.00035215	-1.3913	-0.00067614	-0.66668	-0.00032399	485.9817910675005	15.55	0.14922	15.526	15.417	15.567	-0.024207					5	3	2	0	0	0	0.17911	1	49	49		18.531	0	1	28278			45065	10647	30227	30240	51010	51010					0.21773083576272256
QKNNKRKKRKK	11	Unmodified	_QKNNKRKKRKK_					0	0	0		ENST00000370779.8_1_X:134030894-134030957:-|nuORF	ENST00000370779.8_1_X:134030894-134030957:-|nuORF	ENST00000370779.8_1_X:134030894-134030957:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	485.982942	1454.927	0.067544	3.2825E-05	-0.19784	-9.6145E-05	-0.13029	-6.332E-05	485.982864364039	15.57	0.15247	15.628	15.548	15.7	0.057872	0.050924	0.0007115	NaN	18.531	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38873			45066	10647	30227	30240							0.21773083576272256
QKNQNLRKKER	11	Unmodified	_QKNQNLRKKER_					0	0	0			REV__L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|23|3|sense	REV__L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|23|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.28277587890625	3	481.283057	1440.82734	2.8229	0.0013586	-0.83525	-0.00040199	1.9876	0.00095662	481.2820387831268	102.84	2.0906	102.8	102.18	104.27	-0.047005					125	50	4	0	0	0	0.72892	1	11255	11255		26.75	3.9683	1	829310	+		45067	29540	30228	30241	51011	51011					0.12456221171669313
QKNRPNRLI	9	Unmodified	_QKNRPNRLI_					0	0	0		ENST00000493886.5_1_9:35062192-35072350:-|nuORF;ENSG00000165280|ENST00000358901|VCP	ENST00000493886.5_1_9:35062192-35072350:-|nuORF	ENST00000493886.5_1_9:35062192-35072350:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.2578125	2	569.843813	1137.67307	0.67952	0.00038722	0.65807	0.000375	1.3376	0.00076222	569.8439168573863	72.575	1.2341	73.128	72.405	73.639	0.55386					43	29	2	0	0	0	0.20789	1	8045	8045		25.45	0	1	84925			45068	6066	30229	30242	51012	51012					0.10974436476999472
QKNVNSSA	8	Unmodified	_QKNVNSSA_					0	0	0			REV__ENSG00000121486|ENST00000367506|TRMT1L	REV__ENSG00000121486|ENST00000367506|TRMT1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.21875	2	424.217049	846.419545	1.9084	0.00080956	1.8334	0.00077778	3.7418	0.0015873	424.21773029200483	100.79	1.277	101.09	100.26	101.54	0.2999					57	33	3	0	0	0	0.90523	1	12227	12227		40.778	1.972	1	900380	+		45069	18458	30230	30243	51013	51013					-0.009808356931443996
QKPIHVLVE	9	Unmodified	_QKPIHVLVE_					0	0	0			REV__ENSG00000175262|ENST00000377004|C1orf127	REV__ENSG00000175262|ENST00000377004|C1orf127	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8180541992188	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.78536	1	8119	8119		29.15	1.2673	1	859730	+		45070	22053	30231	30244	51014	51014					0.09498308748334239
QKPIRLAESD	10	Unmodified	_QKPIRLAESD_					0	0	0			REV__nc|ENSG00000007923|Q9NVH1-2|DNAJC11	REV__nc|ENSG00000007923|Q9NVH1-2|DNAJC11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	578.3209228515625	2	578.81967	1155.62479	0.8052	0.00046607	2.5453	0.0014733	3.3506	0.0019394	578.8218707331152	92.447	2.6094	92.606	91.473	94.082	0.15875					111	61	2	0	0	0	0.37624	1	9353	9353		31.53	12.426	1	258500	+		45071	16126	30232	30245	51015	51015					0.05319898046423077
QKPLINKLKQ	10	Unmodified	_QKPLINKLKQ_					0	0	0			REV__nc|ENSG00000178177|Q8N3X6-2|LCORL	REV__nc|ENSG00000178177|Q8N3X6-2|LCORL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.93060302734375	3	403.92744	1208.76049	0.25224	0.00010189	2.3681	0.00095656	2.6204	0.0010584	403.92827500047315	43.269	1.3362	43.703	43.17	44.506	0.4334					104	32	4	0	0	0	0.86446	1	3925	3925		30.569	2.9249	1	3935700	+		45072	30059	30233	30246	51016	51016					0.16446217627867554
QKPLLQLIQ	9	Unmodified	_QKPLLQLIQ_					0	0	0		chr16:1841973-1853039|40|13.68|0.05|8.03|-|0|MEIOB,MEIOB|1	chr16:1841973-1853039|40|13.68|0.05|8.03|-|0|MEIOB,MEIOB|1	chr16:1841973-1853039|40|13.68|0.05|8.03|-|0|MEIOB,MEIOB|1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.7739868164062	2	540.842416	1079.67028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.676	1	67.227	66.727	67.727	0.55071								0	0	0	0.32159	1	7307	7307		23.042	1.0826	1				45073	199	30234	30247	51017	51017					0.13363168299474637
QKPNVRRLIRR	11	Unmodified	_QKPNVRRLIRR_					0	0	0			REV__ENST00000301464.3_1_12:53491832-53494558:+|nuORF	REV__ENST00000301464.3_1_12:53491832-53494558:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.30841064453125	3	479.307537	1434.90078	-1.3736	-0.0006584	4.2797	0.0020513	2.906	0.0013929	479.30948798715343	51.503	0.8999	51.515	50.87	51.77	0.012436					34	24	2	0	0	0	0.7896	1	4429	4429		13.508	0	1	121540	+		45074	24767	30235	30248	51018	51018					0.20072814404829842
QKPTRRPLAP	10	Unmodified	_QKPTRRPLAP_					0	0	0			REV__nc|ENSG00000103449|Q9NSC2-2|SALL1	REV__nc|ENSG00000103449|Q9NSC2-2|SALL1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3546142578125	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.57	1	113.55	113.05	114.05	-0.024811								0	0	0	0.45132	1	12567	12567		20.947	4.4738	1		+		45075	17414	30236	30249	51019	51019					0.11863607136797327
QKQEKKPRKIM	11	Unmodified	_QKQEKKPRKIM_					0	0	0		nc|ENSG00000225830|P0DP91|ERCC6;ENSG00000225830|ENST00000355832|ERCC6	nc|ENSG00000225830|P0DP91|ERCC6;ENSG00000225830|ENST00000355832|ERCC6	nc|ENSG00000225830|P0DP91|ERCC6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.29486083984375	3	471.950139	1412.82859	3.4182	0.0016132	-0.14697	-6.9363E-05	3.2713	0.0015439	471.95004401513967	105.96	1.221	106.15	105.65	106.87	0.18647					86	48	3	0	0	0	0.79224	1	12956	12956		12.957	0.52465	1	219940			45076	15263;8710	30237	30250	51020	51020					0.13868719216225145
QKQLETFFSPP	11	Unmodified	_QKQLETFFSPP_					0	0	0			REV__L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|3|1|sense	REV__L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|3|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.2294006347656	3	441.231077	1320.6714	0.61594	0.00027177	1.0129	0.00044694	1.6289	0.00071871	441.23181115018525	29.638	0.68434	29.548	29.276	29.96	-0.089544					42	15	4	0	0	0	0.69931	1	1905	1905		31.634	2.0835	1	147390	+		45077	29626	30238	30251	51021	51021					0.023893378777302132
QKQLETFFSPP	11	Unmodified	_QKQLETFFSPP_					0	0	0			REV__L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|3|1|sense	REV__L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|3|1|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	441.231077	1320.6714	-1.2748	-0.00056247	3.0077	0.0013271	1.733	0.00076463	441.23271936973265	29.42	1.0397	29.39	28.693	29.733	-0.029207	-0.078801	0.0012262	NaN	31.634	37	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	155950	+		45078	29626	30238	30251							0.023893378777302132
QKQLETFFSPP	11	Unmodified	_QKQLETFFSPP_					0	0	0			REV__L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|3|1|sense	REV__L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|3|1|sense	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	441.231077	1320.6714	0.61594	0.00027177	1.0129	0.00044694	1.6289	0.00071871	441.23181115018525	29.638	0.68434	29.548	29.276	29.96	-0.089544	0.078801	-0.0014143	NaN	31.634	42	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147390	+		45079	29626	30238	30251							0.023893378777302132
QKQLKYRR	8	Unmodified	_QKQLKYRR_					0	0	0			REV__ENST00000473916.1_1_6:30891971-30893984:+|nuORF	REV__ENST00000473916.1_1_6:30891971-30893984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3424072265625	2	560.340907	1118.66726	1.3844	0.00077575	-2.5897	-0.0014511	-1.2053	-0.00067535	560.3393459744692	117.94	0.74445	117.97	117.54	118.29	0.026466					39	25	2	0	0	0	0.85277	1	12982	12982		25.45	6.0902	1	42658	+		45080	27288	30239	30252	51022	51022					0.11267337965318802
QKQPVLQKKIL	11	Unmodified	_QKQPVLQKKIL_					0	0	0			REV__nc|ENSG00000137968|Q8NCS7|SLC44A5	REV__nc|ENSG00000137968|Q8NCS7|SLC44A5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7879943847656	3	441.622128	1321.84456	-0.39447	-0.00017421	-0.061326	-2.7083E-05	-0.45579	-0.00020129	441.62140804815454	37.853	0.10813	38.166	38.091	38.2	0.31312					4	2	2	0	0	0	0.181	1	3067	3067		13.508	9.8889	1	37252	+		45081	29879	30240	30253	51023	51023					0.19650748724802725
QKQTGLIYL	9	Unmodified	_QKQTGLIYL_					0	0	0			REV__ENSG00000134398|ENST00000256797|ERN2	REV__ENSG00000134398|ENST00000256797|ERN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.3095703125	2	532.310949	1062.60735	0.11151	5.9358E-05	0.1137	6.0526E-05	0.22521	0.00011988	532.3108990448857	71.661	0.65193	71.702	71.403	72.055	0.040222					44	27	2	0	0	0	0.69624	1	6875	6875		40.778	1.5253	1	184820	+		45082	19140	30241	30254	51024	51024					0.07854602511406483
QKQTGTKIK	9	Unmodified	_QKQTGTKIK_					0	0	0			REV__nc|ENSG00000130518|Q9H0B3-5|IQCN	REV__nc|ENSG00000130518|Q9H0B3-5|IQCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.314697265625	2	516.314023	1030.61349	-0.83644	-0.00043187	0.169	8.7256E-05	-0.66745	-0.00034461	516.3139322051438	39.382	0.66653	39.75	39.687	40.353	0.36797					21	15	2	0	0	0	0.75725	1	3295	3295		36.447	0.82846	1	1103900	+		45083	18879	30242	30255	51025	51025					0.09941120742928433
QKQVKNIRH	9	Unmodified	_QKQVKNIRH_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8446655273438	2	575.843813	1149.67307	0.87684	0.00050492	-1.3982	-0.00080517	-0.52141	-0.00030025	575.8428213809691	103.65	0.73141	103.77	103.51	104.25	0.12417					41	17	3	0	0	0	0.7932	1	10987	10987		24.203	2.2429	1	307570	+		45084	21394	30243	30256	51026	51026					0.10422436476960684
QKRFIELYRQI	11	Unmodified	_QKRFIELYRQI_					0	0	0		ENST00000466171.1_1_2:118694276-118701638:-|nuORF;ENSG00000125633|ENST00000376300|CCDC93	ENST00000466171.1_1_2:118694276-118701638:-|nuORF	ENST00000466171.1_1_2:118694276-118701638:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.6222229003906	3	498.624421	1492.85143	-0.24645	-0.00012288	-2.4102	-0.0012018	-2.6566	-0.0013247	498.62308144457916	21.663	1.0696	21.599	21.115	22.184	-0.064743					82	38	3	0	0	0	0.7896	1	644	644		13.508	0.55046	1	61443			45085	3400	30244	30257	51027	51027					0.12472061605376439
QKRGVFTKR	9	Unmodified	_QKRGVFTKR_					0	0	0		ENSG00000121053|ENST00000225371|EPX	ENSG00000121053|ENST00000225371|EPX	ENSG00000121053|ENST00000225371|EPX	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3424072265625	2	560.340907	1118.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.99	1	114.01	113.51	114.51	0.020027								0	0	0	0.32469	1	13763	13763		21.96	1.4781	1				45086	3162	30245	30258	51028	51028					0.11267337965318802
QKRKEQLQKNK	11	Unmodified	_QKRKEQLQKNK_					0	0	0		ENSG00000120051|ENST00000369704|CFAP58	ENSG00000120051|ENST00000369704|CFAP58	ENSG00000120051|ENST00000369704|CFAP58	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.60418701171875	3	476.619558	1426.83684	-0.99214	-0.00047287	-1.2183	-0.00058067	-2.2104	-0.0010535	476.6190094266889	15.933	0.15472	15.981	15.926	16.081	0.047803					8	6	2	0	0	0	0.17729	1	101	101		23.378	0	1	33895			45087	3110	30246	30259	51029	51029					0.14049989457203083
QKRKRHKFIF	10	Unmodified	_QKRKRHKFIF_					0	0	0			REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.2852478027344	3	463.285962	1386.83606	-1.383	-0.00064074	-1.2857	-0.00059566	-2.6688	-0.0012364	463.28534180257475	77.841	1.4247	77.932	77.648	79.073	0.091438					70	49	2	0	0	0	0.8573	1	7297	7297		16.007	2.4988	1	67444	+		45088	30043	30247	30260	51030	51030					0.15811239598815519
QKRKRHKFIF	10	Unmodified	_QKRKRHKFIF_					0	0	0			REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	463.285962	1386.83606	-0.12287	-5.6923E-05	-2.7286	-0.0012641	-2.8514	-0.001321	463.2846791206499	78.137	1.4144	78.193	77.96	79.375	0.056114	0.094752	-0.00044451	NaN	16.007	73	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61848	+		45089	30043	30247	30260							0.15811239598815519
QKRKRHKFIF	10	Unmodified	_QKRKRHKFIF_					0	0	0			REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	463.285962	1386.83606	0.030053	1.3923E-05	-2.9333	-0.001359	-2.9033	-0.001345	463.618984690217	78.393	0.78362	78.34	77.852	78.635	-0.053558	0.24113	-0.00072908	NaN	16.007	36	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98120	+		45090	30043	30247	30260							0.15811239598815519
QKRKRHKFIF	10	Unmodified	_QKRKRHKFIF_					0	0	0			REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	463.285962	1386.83606	-0.1911	-8.8535E-05	-2.3203	-0.001075	-2.5115	-0.0011635	463.28485442636395	77.989	1.1376	78.038	77.858	78.996	0.04969	-0.060001	0.00012286	NaN	16.007	55	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76935	+		45091	30043	30247	30260							0.15811239598815519
QKRKRHKFIF	10	Unmodified	_QKRKRHKFIF_					0	0	0			REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	463.285962	1386.83606	-1.0817	-0.00050112	-1.627	-0.00075377	-2.7087	-0.0012549	463.61945260328196	77.93	0.8063	78.057	77.659	78.465	0.12695	-0.04124	0.0010865	NaN	16.007	51	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77647	+		45092	30043	30247	30260							0.15811239598815519
QKRKRHKFIF	10	Unmodified	_QKRKRHKFIF_					0	0	0			REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	463.285962	1386.83606	0.56197	0.00026035	-3.3026	-0.0015301	-2.7407	-0.0012697	463.61874185971374	77.893	1.4107	78.03	77.632	79.042	0.13667	-0.068661	-0.0012424	NaN	16.007	63	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76376	+		45093	30043	30247	30260							0.15811239598815519
QKRKRHKFIF	10	Unmodified	_QKRKRHKFIF_					0	0	0			REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	REV__nc|ENSG00000174796|Q8TBB0-3|THAP6	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	463.285962	1386.83606	-1.383	-0.00064074	-1.2857	-0.00059566	-2.6688	-0.0012364	463.28534180257475	77.841	1.4247	77.932	77.648	79.073	0.091438	-0.16598	0.0015608	NaN	16.007	70	49	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67444	+		45094	30043	30247	30260							0.15811239598815519
QKRLKLKLRS	10	Unmodified	_QKRLKLKLRS_					0	0	0		ENST00000304858.6_1_5:132439683-132439931:+|nuORF	ENST00000304858.6_1_5:132439683-132439931:+|nuORF	ENST00000304858.6_1_5:132439683-132439931:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8826293945312	2	635.427513	1268.84047	1.5069	0.00095751	-2.5541	-0.001623	-1.0472	-0.00066545	635.4249467963087	112.18	0.092255	112.28	112.2	112.29	0.10638					6	2	3	0	0	0	0.37624	1	12075	12075		3.1592	0	1	1042900			45095	9842	30248	30261	51031	51031					0.21680704021719066
QKRLKSSP	8	Unmodified	_QKRLKSSP_					0	0	0			REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2873229980469	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.87922	1	10088	10088		31.955	4.0726	1	50946000	+		45096	16532	30249	30262	51032	51032					0.0874858239999412
QKRPLNAS	8	Unmodified	_QKRPLNAS_					0	0	0			REV__ENSG00000180884|ENST00000404801|ZNF792	REV__ENSG00000180884|ENST00000404801|ZNF792	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.263916015625	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.89962	1	8573	8573		38.806	0	1	4885100	+		45097	22422	30250	30263	51033	51033					0.054357228488470355
QKRQLTAPRR	10	Unmodified	_QKRQLTAPRR_					0	0	0			REV__nc|ENSG00000054611|Q8WUA7-3|TBC1D22A	REV__nc|ENSG00000054611|Q8WUA7-3|TBC1D22A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.383544921875	2	627.381094	1252.74764	-0.21917	-0.0001375	2.9844	0.0018723	2.7652	0.0017348	627.3827536710313	113.14	0.55793	113.07	112.73	113.28	-0.067215					52	23	3	0	0	0	0.85251	1	12283	12283		19.997	0.89325	1	140420	+		45098	16403	30251	30264	51034	51034					0.1313719928834871
QKRRNSSIPN	10	Unmodified	_QKRRNSSIPN_					0	0	0		nc|ENSG00000066230|P48764-2|SLC9A3;ENSG00000066230|ENST00000264938|SLC9A3	nc|ENSG00000066230|P48764-2|SLC9A3	nc|ENSG00000066230|P48764-2|SLC9A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	600.3346557617188	2	600.33381	1198.65307	2.3588	0.0014161	-2.5944	-0.0015575	-0.23553	-0.00014139	600.3322451501099	94.355	2.7014	94.296	92.89	95.591	-0.059204					137	64	3	0	0	0	0.8608	1	10082	10082		34.173	1.3601	1	661970			45099	1153	30252	30265	51035	51035					0.061686407463867
QKRRQVLSRKE	11	Unmodified	_QKRRQVLSRKE_					0	0	0			REV__ENSG00000226124|ENST00000420128|FTCDNL1	REV__ENSG00000226124|ENST00000420128|FTCDNL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.6231384277344	3	476.623303	1426.84808	3.7396	0.0017824	-3.4655	-0.0016517	0.27412	0.00013065	476.62154856038563	107.85	0.22624	107.96	107.81	108.04	0.11715					18	6	3	0	0	0	0.77205	1	13184	13184		17.167	2.4731	1	5038900	+		45100	23743	30253	30266	51036	51036					0.1517281155136061
QKRRRRRMLWH	11	Unmodified	_QKRRRRRMLWH_					0	0	0			REV__ENST00000579674.1_1_17:27898877-27899117:+|nuORF	REV__ENST00000579674.1_1_17:27898877-27899117:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.8790283203125	4	406.490385	1621.93243	1.7005	0.00069123	0.18583	7.5538E-05	1.8863	0.00076677	406.4903588750069	19.385	0.69897	18.916	18.745	19.444	-0.46967					23	14	3	0	0	0	0.18425	1	488	488		0.37141	0	1	54155	+		45101	21393	30254	30267	51037	51037					0.14634483887130045
QKRRRRRMLWH	11	Unmodified	_QKRRRRRMLWH_					0	0	0			REV__ENST00000579674.1_1_17:27898877-27899117:+|nuORF	REV__ENST00000579674.1_1_17:27898877-27899117:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.8789978027344	4	406.490385	1621.93243	-0.0023425	-9.5219E-07	1.5478	0.00062915	1.5454	0.0006282	406.4911180038629	19.57	0.548	18.941	18.711	19.259	-0.6296					22	11	3	0	0	0	0.1842	1	515	515		0.37141	0	1	51234	+		45102	21393	30254	30267	51038	51038					0.14634483887130045
QKRRVYRRKRS	11	Unmodified	_QKRRVYRRKRS_					0	0	0		ENSG00000119403|ENST00000373896|PHF19	ENSG00000119403|ENST00000373896|PHF19	ENSG00000119403|ENST00000373896|PHF19	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.38330078125	3	511.650075	1531.92839	-0.65669	-0.00033599	0.72796	0.00037246	0.071272	3.6466E-05	511.6503198735283	110.23	0.84827	110.23	110.13	110.98	0					26	24	2	0	0	0	0.18386	1	11523	11523		5.6988	2.4875	1	43923			45103	3067	30255	30268	51039	51039					0.1837071766506142
QKRRVYRRKRS	11	Unmodified	_QKRRVYRRKRS_					0	0	0		ENSG00000119403|ENST00000373896|PHF19	ENSG00000119403|ENST00000373896|PHF19	ENSG00000119403|ENST00000373896|PHF19	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	511.650075	1531.92839	0.53733	0.00027492	-0.83152	-0.00042545	-0.29419	-0.00015052	511.64967349200094	110.36	0.34135	110.39	110.25	110.6	0.031738	0.12742	-3.4232E-05	NaN	5.6988	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86657			45104	3067	30255	30268							0.1837071766506142
QKRRVYRRKRS	11	Unmodified	_QKRRVYRRKRS_					0	0	0		ENSG00000119403|ENST00000373896|PHF19	ENSG00000119403|ENST00000373896|PHF19	ENSG00000119403|ENST00000373896|PHF19	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	511.650075	1531.92839	-0.326	-0.0001668	0.18551	9.4917E-05	-0.14049	-7.1883E-05	511.6500175405377	110.08	1.5296	110.2	110.07	111.6	0.11659	-0.058661	0.0015269	NaN	5.6988	84	55	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	525420			45105	3067	30255	30268							0.1837071766506142
QKRRVYRRKRS	11	Unmodified	_QKRRVYRRKRS_					0	0	0		ENSG00000119403|ENST00000373896|PHF19	ENSG00000119403|ENST00000373896|PHF19	ENSG00000119403|ENST00000373896|PHF19	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	511.650075	1531.92839	0.81387	0.00041642	-1.2934	-0.00066178	-0.47955	-0.00024536	511.64942224881554	110.15	1.2115	110.22	110.11	111.32	0.073685	-0.037128	-0.00074322	NaN	5.6988	51	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	180280			45106	3067	30255	30268							0.1837071766506142
QKRVLGLR	8	Unmodified	_QKRVLGLR_					0	0	0		ENST00000592634.5_1_19:5895457-5895973:-|nuORF	ENST00000592634.5_1_19:5895457-5895973:-|nuORF	ENST00000592634.5_1_19:5895457-5895973:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	485.3213195800781	2	485.319443	968.624333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.561	1	15.537	15.037	16.037	-0.024207								0	0	0	0.29631	1	49	49		25.45	0	1				45107	14292	30256	30269	51040	51040					0.13876567907902881
QKRVLKGHQIF	11	Unmodified	_QKRVLKGHQIF_					0	0	0			REV__ENST00000459908.5_1_13:113439469-113512287:+|nuORF	REV__ENST00000459908.5_1_13:113439469-113512287:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9434509277344	3	451.941973	1352.80409	-1.2962	-0.0005858	3.8588	0.001744	2.5626	0.0011582	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.76579	1	4260	4260		18.531	3.7522	1	734340	+		45108	16561	30257	30270	51041	51041					0.14179827125030897
QKSARVLF	8	Unmodified	_QKSARVLF_					0	0	0			REV__nc|ENSG00000111859|Q14511-2|NEDD9	REV__nc|ENSG00000111859|Q14511-2|NEDD9	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.78369140625	2	474.784902	947.55525	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.78	1	26.741	26.241	27.241	-0.038523								0	0	0	0.29703	1	1234	1234		37.159	5.2042	1		+		45109	29778	30258	30271	51042	51042					0.07937483888326824
QKSILSSRK	9	Unmodified	_QKSILSSRK_					0	0	0		ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8218383789062	2	523.819473	1045.62439	2.1198	0.0011104	0.31109	0.00016296	2.4309	0.0012734	523.8195603086102	100.06	1.5228	100.4	100.02	101.54	0.33294					74	39	2	0	0	0	0.78983	1	12104	12104		27.882	4.8398	1	505800			45110	8030	30259	30272	51043	51043					0.1034052311722462
QKSILSSRK	9	Unmodified	_QKSILSSRK_					0	0	0		ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	523.819473	1045.62439	-1.5374	-0.00080533	3.3221	0.0017402	1.7846	0.00093483	524.3223572037105	100.42	0.44279	100.59	100.33	100.77	0.17199	0.095846	0.003009	NaN	27.882	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24227			45111	8030	30259	30272							0.1034052311722462
QKSKGPLFRR	10	Unmodified	_QKSKGPLFRR_					0	0	0			REV__nc|ENSG00000075035|Q2TBF2-2|WSCD2	REV__nc|ENSG00000075035|Q2TBF2-2|WSCD2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2472229003906	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.754	1	15.67	15.17	16.17	-0.083363								0	0	0	0.45132	1	75	75		18.531	2.0012	1		+		45112	16699	30260	30273	51044	51044					0.12079296028127828
QKSQLIIHL	9	Unmodified	_QKSQLIIHL_					0	0	0		ENSG00000147118|ENST00000376943|ZNF182;nc|ENSG00000147118|P17025|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	540.3298950195312	2	540.332216	1078.64988	-0.70981	-0.00038353	-2.9408	-0.001589	-3.6506	-0.0019726	540.3304590053511	88.774	3.0923	88.774	87.769	90.861	0					160	71	3	0	0	0	0.67235	1	8560	8560		42.474	3.6683	1	291030			45113	4881	30261	30274	51045	51045					0.11369997639690155
QKSQLIIHL	9	Unmodified	_QKSQLIIHL_					0	0	0		ENSG00000147118|ENST00000376943|ZNF182;nc|ENSG00000147118|P17025|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	540.332216	1078.64988	-0.20886	-0.00011285	-3.4522	-0.0018653	-3.661	-0.0019782	540.3302093861229	88.796	3.2752	88.865	87.488	90.763	0.068161	0.12823	0.00059948	NaN	42.474	200	76	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	373860			45114	4881	30261	30274							0.11369997639690155
QKSQLIIHL	9	Unmodified	_QKSQLIIHL_					0	0	0		ENSG00000147118|ENST00000376943|ZNF182;nc|ENSG00000147118|P17025|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	540.332216	1078.64988	2.0899	0.0011292	-5.8201	-0.0031448	-3.7302	-0.0020155	540.3289675222843	88.709	3.2534	88.637	87.424	90.678	-0.07238	-0.099433	-0.0019594	NaN	42.474	209	76	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	457370			45115	4881	30261	30274							0.11369997639690155
QKSQLIIHL	9	Unmodified	_QKSQLIIHL_					0	0	0		ENSG00000147118|ENST00000376943|ZNF182;nc|ENSG00000147118|P17025|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	540.332216	1078.64988	0.077164	4.1694E-05	-3.8029	-0.0020548	-3.7258	-0.0020131	540.3300646695246	88.373	3.3694	88.581	87.291	90.66	0.2073	-0.15576	0.00022044	NaN	42.474	202	79	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	458000			45116	4881	30261	30274							0.11369997639690155
QKSQLIIHL	9	Unmodified	_QKSQLIIHL_					0	0	0		ENSG00000147118|ENST00000376943|ZNF182;nc|ENSG00000147118|P17025|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	540.332216	1078.64988	-1.483	-0.00080129	-2.0993	-0.0011343	-3.5823	-0.0019356	540.3309607658338	88.342	3.5574	88.511	87.35	90.908	0.16922	-0.22549	0.0020615	NaN	42.474	208	83	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	390780			45117	4881	30261	30274							0.11369997639690155
QKSQLIIHL	9	Unmodified	_QKSQLIIHL_					0	0	0		ENSG00000147118|ENST00000376943|ZNF182;nc|ENSG00000147118|P17025|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	540.332216	1078.64988	0.18537	0.00010016	-4.0375	-0.0021816	-3.8522	-0.0020814	540.3299606975227	88.462	2.1768	88.911	87.934	90.111	0.44893	0.17462	-3.3099E-05	NaN	42.474	121	52	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	420230			45118	4881	30261	30274							0.11369997639690155
QKSQLIIHL	9	Unmodified	_QKSQLIIHL_					0	0	0		ENSG00000147118|ENST00000376943|ZNF182;nc|ENSG00000147118|P17025|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	ENSG00000147118|ENST00000376943|ZNF182	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	540.332216	1078.64988	-1.5774	-0.00085233	-2.3419	-0.0012654	-3.9193	-0.0021177	540.3309185028355	88.5	2.0726	88.971	88.026	90.098	0.47068	0.23441	0.0017993	NaN	42.474	125	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	577360			45119	4881	30261	30274							0.11369997639690155
QKSSSSDS	8	Unmodified	_QKSSSSDS_					0	0	0		ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1839294433594	2	413.182872	824.35119	2.3001	0.00095037	-1.5602	-0.00064463	0.73996	0.00030574	413.18257983004736	99.112	0.94866	99.474	99.096	100.04	0.36137					76	23	5	0	0	0	0.86288	1	11994	11994		26.796	3.7594	1	10767000			45120	7992	30262	30275	51046	51046					-0.06801125063645941
QKSSSSDS	8	Unmodified	_QKSSSSDS_					0	0	0		ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.18353271484375	2	413.182872	824.35119	2.34	0.00096685	-1.3158	-0.00054368	1.0242	0.00042317	413.18263814360023	99.934	1.4742	100.27	99.852	101.33	0.33294					93	36	4	0	0	0	0.86288	1	12018	12018		26.796	3.7536	1	6186100			45121	7992	30262	30275	51047	51047					-0.06801125063645941
QKSSSSDS	8	Unmodified	_QKSSSSDS_					0	0	0		ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	ENSG00000189134|ENST00000343684|NKAPL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1831970214844	2	413.182872	824.35119	2.0036	0.00082786	-1.1317	-0.00046761	0.87189	0.00036025	413.18277054138287	99.966	1.3545	100.32	99.907	101.26	0.35072					93	33	4	0	0	0	0.86288	1	12075	12075		26.796	1.3459	1	6662300			45122	7992	30262	30275	51048	51048					-0.06801125063645941
QKTCFIILSKL	11	Unmodified	_QKTCFIILSKL_					0	0	0		ENSG00000184575|ENST00000332707|XPOT	ENSG00000184575|ENST00000332707|XPOT	ENSG00000184575|ENST00000332707|XPOT	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	647.3854370117188	2	647.383591	1292.75263	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.666	1	70.213	69.713	70.713	0.54693								0	0	0	0.56276	1	7726	7726		35.152	1.2304	1				45123	7625	30263	30276	51049	51049					0.11796322316104124
QKTFSSIDR	9	Unmodified	_QKTFSSIDR_					0	0	0		ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	ENST00000216014.8_1_22:38878537-38878720:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.2864379882812	2	541.285463	1080.55637	-0.40662	-0.0002201	0.20459	0.00011074	-0.20202	-0.00010935	541.2854856444462	21.769	1.1064	21.14	20.586	21.692	-0.62834					53	27	3	0	0	0	0.44529	1	818	818		54.722	1.7857	1	346250			45124	9125	30264	30277	51050	51050					0.01931653466544958
QKTKTIRST	9	Unmodified	_QKTKTIRST_					0	0	0		ENST00000284384.6_1_17:64637544-64770230:+|nuORF;ENSG00000154229|ENST00000413366|PRKCA	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8170166015625	2	531.81693	1061.61931	0.83378	0.00044342	-0.56049	-0.00029808	0.27328	0.00014534	531.816483115085	101.13	0.87817	101.27	100.89	101.77	0.14352					39	21	3	0	0	0	0.77244	1	10600	10600		32.812	0	1	446230			45125	5263	30265	30278	51051	51051					0.09096219254638527
QKTLCDVIL	9	Unmodified	_QKTLCDVIL_					0	0	0		nc|ENSG00000122550|Q8IXQ5-3|KLHL7;ENSG00000122550|ENST00000339077|KLHL7	nc|ENSG00000122550|Q8IXQ5-3|KLHL7	nc|ENSG00000122550|Q8IXQ5-3|KLHL7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7935180664062	2	516.791535	1031.56852	1.5571	0.00080467	2.1758	0.0011244	3.7328	0.0019291	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.76419	1	9140	9140		35.152	3.6222	1	834930			45126	3231	30266	30279	51052	51052					0.05399553885399655
QKTPQKATTG	10	Unmodified	_QKTPQKATTG_					0	0	0		ENSG00000177575|ENST00000432237|CD163;nc|ENSG00000177575|Q86VB7-4|CD163;nc|ENSG00000177575|Q86VB7|CD163;nc|ENSG00000177575|Q86VB7-2|CD163;ENST00000537044.1_1_12:7633616-7656286:-|nuORF	ENSG00000177575|ENST00000432237|CD163	ENSG00000177575|ENST00000432237|CD163	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2933349609375	2	530.293288	1058.57202	2.0317	0.0010774	-1.9029	-0.0010091	0.12876	6.828E-05	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.86587	1	9614	9614		29.17	0	1	1811300			45127	7149	30267	30280	51053	51053					0.045079399835913136
QKVEFWKLI	9	Unmodified	_QKVEFWKLI_					0	0	0			REV__ENSG00000147459|ENST00000276440|DOCK5	REV__ENSG00000147459|ENST00000276440|DOCK5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	595.8475341796875	2	595.850242	1189.68593	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.203	1	16.721	16.221	17.221	-0.48256								0	0	0	0.19249	1	229	229		68.787	8.6686	1		+		45128	20072	30268	30281	51054	51054					0.09867454816526333
QKVETYEK	8	Unmodified	_QKVETYEK_					0	0	0		nc|ENSG00000168491|Q8TBZ0-2|CCDC110;ENSG00000168491|ENST00000307588|CCDC110	nc|ENSG00000168491|Q8TBZ0-2|CCDC110	nc|ENSG00000168491|Q8TBZ0-2|CCDC110	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.7684326171875	2	512.769114	1023.52368	0.87728	0.00044984	-0.94824	-0.00048623	-0.070962	-3.6387E-05	512.7684517764806	22.796	1.0179	22.185	21.865	22.883	-0.6107					53	24	4	0	0	0	0.66521	2	970	946;970		68.787	3.123	1	625090			45129	6406	30269	30282	51055;51056	51056					0.012854463437065533
QKVIEEAEVA	10	Unmodified	_QKVIEEAEVA_					0	0	0			REV__ENSG00000137770|ENST00000260327|CTDSPL2	REV__ENSG00000137770|ENST00000260327|CTDSPL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.3024291992188	2	558.300778	1114.587	-0.26997	-0.00015073	1.5057	0.00084064	1.2357	0.00068992	558.3014243316093	27.942	0.60811	27.845	27.576	28.184	-0.096947					26	13	3	0	0	0	0.67571	1	1646	1646		45.972	5.1941	1	158810	+		45130	15615	30270	30283	51057	51057					0.03429387060964473
QKVKLIYVK	9	Unmodified	_QKVKLIYVK_					0	0	0			REV__ENST00000302236.9_1_4:83826058-83827525:+|nuORF	REV__ENST00000302236.9_1_4:83826058-83827525:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8659057617188	2	559.868434	1117.72232	1.3762	0.0007705	-3.4613	-0.0019378	-2.085	-0.0011673	559.8673107113664	112.49	0.07251	112.52	112.46	112.53	0.028854					4	2	2	0	0	0	0.20789	1	12285	12285		3.6843	0	1	7987.1	+		45131	24779	30271	30284	51058	51058					0.1681633171322119
QKVKNWVKELR	11	Unmodified	_QKVKNWVKELR_					0	0	0		ENST00000547246.1_1_12:72164401-72167858:+|nuORF;ENSG00000080371|ENST00000261263|RAB21	ENST00000547246.1_1_12:72164401-72167858:+|nuORF	ENST00000547246.1_1_12:72164401-72167858:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.62353515625	3	476.620899	1426.84087	2.8112	0.0013399	3.054	0.0014556	5.8652	0.0027955	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.78683	1	13254	13254		14.086	1.6532	1	2689700			45132	1440	30272	30285	51059	51059					0.1445207895094427
QKVLCLLAS	9	Unmodified	_QKVLCLLAS_					0	0	0		nc|ENSG00000184465|A2RRH5-2|WDR27;nc|ENSG00000184465|A2RRH5|WDR27;ENSG00000184465|ENST00000448612|WDR27;ENST00000467418.1_1_6:170058029-170062491:-|nuORF;ENST00000546525.5_1_6:170034618-170062491:-|nuORF	nc|ENSG00000184465|A2RRH5-2|WDR27	nc|ENSG00000184465|A2RRH5-2|WDR27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906188964844	2	487.788795	973.563038	-0.085708	-4.1808E-05	3.6076	0.0017597	3.5219	0.0017179	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.7932	1	8072	8072		24.203	0.68005	1	514950			45133	7615	30273	30286	51060	51060					0.07519875093601058
QKVLEQIM	8	Unmodified	_QKVLEQIM_					0	0	0		nc|ENSG00000147231|Q6NSI4-4|RADX;ENSG00000147231|ENST00000372548|RADX;nc|ENSG00000147231|Q6NSI4-2|RADX	nc|ENSG00000147231|Q6NSI4-4|RADX	nc|ENSG00000147231|Q6NSI4-4|RADX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7791442871094	2	494.778428	987.542302	-0.60525	-0.00029947	4.2344	0.0020951	3.6291	0.0017956	494.7803656183054	83.829	2.2213	83.994	82.644	84.865	0.1651					103	51	3	0	0	0	0.86677	1	8061	8061		27.882	0	1	285340			45134	4889	30274	30287	51061	51061					0.048032847139324986
QKVMEKRK	8	Unmodified	_QKVMEKRK_					0	0	0		ENST00000475858.1_1_10:14563191-14564038:-|nuORF;nc|ENSG00000065809|Q9H098|FAM107B;ENSG00000065809|ENST00000181796|FAM107B	ENST00000475858.1_1_10:14563191-14564038:-|nuORF	ENST00000475858.1_1_10:14563191-14564038:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.8139038085938	2	523.810593	1045.60663	2.1623	0.0011327	4.2356	0.0022186	6.3979	0.0033513	523.8126069977261	24.772	0.57644	24.258	23.968	24.544	-0.51365					33	12	4	0	0	0	0.83456	1	1234	1234		60.972	2.19	1	276450			45135	1141	30275	30288	51062	51062					0.0856548459073565
QKVNQKIRS	9	Unmodified	_QKVNQKIRS_					0	0	0			REV__nc|ENSG00000172752|A8TX70-2|COL6A5	REV__nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.82958984375	2	550.830372	1099.64619	0.14183	7.8122E-05	3.4819	0.0019179	3.6237	0.0019961	550.8321308312868	17.7	0.47925	17.079	16.875	17.355	-0.62141					34	12	4	0	0	0	0.14386	1	310	310		84.916	0	1	821950	+		45136	21854	30276	30289	51063	51063					0.10035327865784893
QKVQYVPKH	9	Unmodified	_QKVQYVPKH_					0	0	0			REV__ENSG00000173269|ENST00000372027|MMRN2	REV__ENSG00000173269|ENST00000372027|MMRN2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	563.8238525390625	2	563.822015	1125.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.571	1	26.599	26.099	27.099	0.02817								0	0	0	0.31828	1	1022	1022		24.203	0	1		+		45137	21912	30277	30290	51064	51064					0.0716882697984147
QKVTNLLNPGF	11	Unmodified	_QKVTNLLNPGF_					0	0	0			REV__ENSG00000168002|ENST00000301788|POLR2G	REV__ENSG00000168002|ENST00000301788|POLR2G	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	410.8983154296875	3	410.89955	1229.67682	-0.3824	-0.00015713	2.4635	0.0010122	2.0811	0.00085511	411.2349693387629	22.797	0.73568	22.738	22.419	23.154	-0.05867					43	24	2	0	0	0	0.7434	1	783	783		21.032	0.71722	1	44235	+		45138	21448	30278	30291	51065	51065					0.07117061460166951
QKVTRKLLHRR	11	Unmodified	_QKVTRKLLHRR_					0	0	0			REV__nc|ENSG00000144285|P35498-3|SCN1A	REV__nc|ENSG00000144285|P35498-3|SCN1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9756164550781	3	478.975788	1433.90553	-0.89818	-0.00043021	-1.4459	-0.00069257	-2.3441	-0.0011228	478.9750533889841	51.817	1.8474	51.852	50.982	52.829	0.034588					134	56	3	0	0	0	0.79224	1	4078	4078		12.957	3.3113	1	276750	+		45139	19879	30279	30292	51066	51066					0.20593698547577333
QKWFLKLPVL	10	Unmodified	_QKWFLKLPVL_					0	0	0			REV__ENST00000467224.5_1_3:25761063-25761626:-|nuORF	REV__ENST00000467224.5_1_3:25761063-25761626:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	636.3971557617188	2	636.397359	1270.78016	-0.01464	-9.3171E-06	-0.22109	-0.0001407	-0.23573	-0.00015002	636.3974001587258	101.99	0.74551	101.99	101.57	102.32	0					40	18	3	0	0	0	0.85958	1	10389	10389		15.642	0	1	242290	+		45140	27150	30280	30293	51067	51067					0.1556059363863369
QLAAILYLR	9	Unmodified	_QLAAILYLR_					0	0	0		ENST00000488498.2_1_1:156377231-156377309:-|nuORF	ENST00000488498.2_1_1:156377231-156377309:-|nuORF	ENST00000488498.2_1_1:156377231-156377309:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8289794921875	2	530.829309	1059.64407	-0.18777	-9.9676E-05	0.36027	0.00019124	0.17249	9.1564E-05	530.8293441521571	73.718	1.5584	74.106	73.797	75.355	0.38779					86	39	4	0	0	0	0.64922	1	8314	8314		44.117	4.864	1	3955200			45141	12630	30281	30294	51068	51068					0.1166289912796401
QLAEAERM	8	Unmodified	_QLAEAERM_					0	0	0		nc|ENSG00000169641|Q86V48-2|LUZP1;nc|ENSG00000169641|Q86V48-3|LUZP1;ENSG00000169641|ENST00000302291|LUZP1	nc|ENSG00000169641|Q86V48-2|LUZP1	nc|ENSG00000169641|Q86V48-2|LUZP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	474.2322082519531	2	474.234384	946.454216	0.18958	8.9905E-05	-4.3239	-0.0020505	-4.1343	-0.0019606	474.2322245815835	39.967	0.8533	39.936	39.522	40.376	-0.03027					44	20	3	0	0	0	0.90983	1	2838	2838		42.396	0	1	388680			45142	6513	30282	30295	51069	51069					-0.021153358766923702
QLAGTLLIYLL	11	Unmodified	_QLAGTLLIYLL_					0	0	0			REV__ENSG00000129562|ENST00000250498|DAD1	REV__ENSG00000129562|ENST00000250498|DAD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.587646484375	3	406.588313	1216.74311	0.5758	0.00023411	-2.1697	-0.00088218	-1.5939	-0.00064807	406.5873508642622	24.247	1.5285	24.302	23.869	25.398	0.055485					100	43	4	0	0	0	0.62914	1	894	894		41.08	5.928	1	404210	+		45143	18825	30283	30296	51070	51070					0.14340877302220179
QLAHPGPGLV	10	Unmodified	_QLAHPGPGLV_					0	0	0			REV__ENST00000512731.5_1_1:1567737-1568735:+|nuORF	REV__ENST00000512731.5_1_1:1567737-1568735:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7801513671875	2	494.782359	987.550165	-1.0037	-0.00049663	-3.3955	-0.00168	-4.3992	-0.0021767	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.85694	1	8391	8391		21.96	1.013	1	265620			45144	24211	30284	30297	51071	51071					0.055891800257199975
QLAKFVSF	8	Unmodified	_QLAKFVSF_					0	0	0			REV__ENST00000510626.5_1_4:3131970-3189635:+|nuORF	REV__ENST00000510626.5_1_4:3131970-3189635:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.26824951171875	2	470.268553	938.522553	-0.59682	-0.00028066	0.69957	0.00032898	0.10275	4.8321E-05	470.2687452652717	73.919	2.2099	74.478	73.965	76.174	0.55891					143	55	4	0	0	0	0.93529	1	8397	8397		52.299	0	1	1996400	+		45145	27956	30285	30298	51072	51072					0.050832767654810596
QLAKQALQA	9	Unmodified	_QLAKQALQA_					0	0	0			REV__nc|ENSG00000155313|Q9UHP3|USP25	REV__nc|ENSG00000155313|Q9UHP3|USP25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	485.7850036621094	2	485.787641	969.56073	0.72392	0.00035167	-3.5527	-0.0017259	-2.8288	-0.0013742	485.7856481371192	15.835	0.30506	15.811	15.72	16.025	-0.024035					17	11	2	0	0	0	0.7932	1	92	92		23.042	2.0956	1	76997	+		45146	20423	30286	30299	51073	51073					0.07473162680139467
QLALLETHLL	10	Unmodified	_QLALLETHLL_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8427124023438	2	575.845156	1149.67576	0.60609	0.00034901	-4.3948	-0.0025308	-3.7888	-0.0021817	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.86218	1	8954	8954		32.812	1.2826	1	2381900			45147	7939	30287	30300	51074	51074					0.10690847091291289
QLALRKVSH	9	Unmodified	_QLALRKVSH_					0	0	0		nc|ENSG00000106336|O75426-2|FBXO24;nc|ENSG00000106336|O75426-4|FBXO24;ENSG00000106336|ENST00000241071|FBXO24;nc|ENSG00000106336|O75426-3|FBXO24	nc|ENSG00000106336|O75426-2|FBXO24	nc|ENSG00000106336|O75426-2|FBXO24	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.2916259765625	2	526.322183	1050.62981	0.92818	0.00048852	3.4873	0.0018354	4.4155	0.002324	526.3238925847731	54.306	1.2949	54.713	53.737	55.032	0.40663					55	30	2	0	0	0	0.20789	1	5389	5389		26.693	0	1	185630			45148	2289	30288	30301	51075	51075					0.10652246699692114
QLANWEEEM	9	Unmodified	_QLANWEEEM_					0	0	0			REV__nc|ENSG00000129197|Q86UA6-6|RPAIN	REV__nc|ENSG00000129197|Q86UA6-6|RPAIN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.8179321289062	2	575.247689	1148.48082	-0.22096	-0.00012711	-2.0966	-0.0012061	-2.3176	-0.0013332	575.2463046286728	87.2	0.5014	87.646	87.389	87.89	0.44628					17	11	2	0	0	0	0.20789	1	10213	10213		30.504	8.5438	1	155760	+		45149	18809	30289	30302	51076	51076					-0.08747691776034117
QLAPGVPLL	9	Unmodified	_QLAPGVPLL_					0	0	0			REV__nc|ENSG00000204469|P48634-2|PRRC2A	REV__nc|ENSG00000204469|P48634-2|PRRC2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7203063964844	2	454.284203	906.553853	0.82347	0.00037409	-2.0883	-0.00094867	-1.2648	-0.00057458	454.28348748764176	32.737	0.54944	32.948	32.636	33.186	0.21168					22	12	3	0	0	0	0.20789	1	2344	2344		44.531	2.0566	1	142180	+		45150	23495	30290	30303	51077	51077					0.0968384979955772
QLAPRPGP	8	Unmodified	_QLAPRPGP_					0	0	0			REV__ENST00000462073.5_1_22:30688366-30689945:-|nuORF	REV__ENST00000462073.5_1_22:30688366-30689945:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.76446533203125	2	418.24287	834.471186	0.94919	0.00039699	1.4597	0.00061051	2.4089	0.0010075	418.24388163650985	33.274	0.29685	33.444	33.314	33.61	0.16971					9	6	2	0	0	0	0.4196	1	2384	2384		25.45	0	1	29917	+		45151	17122	30291	30304	51078	51078					0.047329527914257596
QLARAKPG	8	Unmodified	_QLARAKPG_					0	0	0			REV__ENST00000352527.5_1_1:6086380-6086455:+|nuORF	REV__ENST00000352527.5_1_1:6086380-6086455:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.75482177734375	2	420.756144	839.497735	-2.163	-0.00091008	-0.04622	-1.9447E-05	-2.2092	-0.00092953	420.7559301673431	20.73	1.3575	20.73	19.75	21.107	0					81	64	2	0	0	0	0.80706	1	508	508		19.36	5.5846	1	64367	+		45152	25347	30292	30305	51079	51079					0.07156641682752252
QLARGALH	8	Unmodified	_QLARGALH_					0	0	0			REV__nc|ENSG00000240268|A6NHM9|MOXD2P	REV__nc|ENSG00000240268|A6NHM9|MOXD2P	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.2558898925781	2	433.253769	864.492984	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.87	1	114.93	114.43	115.43	0.061073								0	0	0	0.29199	1	12269	12269		29.842	0	1		+		45153	30230	30293	30306	51080	51080					0.05531757539984028
QLARGMEY	8	Unmodified	_QLARGMEY_					0	0	0		ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;ENSG00000066468|ENST00000358487|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23590087890625	2	484.236927	966.459301	-1.0641	-0.00051528	-0.85776	-0.00041536	-1.9219	-0.00093064	484.2366198797029	86.871	1.6056	87.325	87.019	88.625	0.45429					96	38	4	0	0	0	0.91005	1	10285	10285		42.474	1.6963	1	9271700			45154	1162	30294	30307	51081	51081					-0.02527032014074848
QLARLGKYTF	10	Unmodified	_QLARLGKYTF_					0	0	0			REV__ENSG00000101417|ENST00000409299|PXMP4	REV__ENSG00000101417|ENST00000409299|PXMP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.8406372070312	2	598.842948	1195.67134	-0.59473	-0.00035615	0.41999	0.00025151	-0.17474	-0.00010464	598.8431691150735	48.024	0.64759	48.947	48.622	49.269	0.92315					51	15	4	0	0	0	0.67571	1	4667	4667		45.972	0	1	5664900	+		45155	17278	30295	30308	51082	51082					0.08133382668370359
QLARLWPK	8	Unmodified	_QLARLWPK_					0	0	0			REV__ENSG00000130812|ENST00000253109|ANGPTL6	REV__ENSG00000130812|ENST00000253109|ANGPTL6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3030090332031	2	506.308544	1010.60253	0.40486	0.00020498	0.61276	0.00031025	1.0176	0.00051523	506.30888331142467	56.209	0.70053	56.309	55.673	56.373	0.099186					45	29	2	0	0	0	0.87922	1	4727	4727		31.955	0	1	200050	+		45156	18912	30296	30309	51083	51083					0.0976576315931652
QLASDGSPKG	10	Unmodified	_QLASDGSPKG_					0	0	0		ENSG00000147251|ENST00000276202|DOCK11	ENSG00000147251|ENST00000276202|DOCK11	ENSG00000147251|ENST00000276202|DOCK11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.2409973144531	2	480.243264	958.471974	-1.848	-0.00088747	2.0889	0.0010032	0.24097	0.00011572	480.24400212311673	32.713	0.57332	32.713	32.476	33.049	0					49	27	3	0	0	0	0.86587	1	1663	1663		29.17	4.6509	1	131570			45157	4892	30297	30310	51084	51084					-0.008922973501739762
QLASGERPAVL	11	Unmodified	_QLASGERPAVL_					0	0	0		ENST00000349841.9_1_3:169490802-169490979:+|nuORF	ENST00000349841.9_1_3:169490802-169490979:+|nuORF	ENST00000349841.9_1_3:169490802-169490979:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.821533203125	2	570.822212	1139.62987	-0.23349	-0.00013328	3.926	0.0022411	3.6925	0.0021078	570.8242504843668	61.573	0.86258	61.603	61.338	62.201	0.029575					86	37	3	0	0	0	0.55601	1	5761	5761		47.96	1.5027	1	572170			45158	10320	30298	30311	51085	51085					0.06564201909031908
QLCHLRFT	8	Unmodified	_QLCHLRFT_					0	0	0			REV__nc|ENSG00000011143|Q9NXB0-3|MKS1	REV__nc|ENSG00000011143|Q9NXB0-3|MKS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2687683105469	2	509.268561	1016.52257	0.63258	0.00032215	1.7032	0.0008674	2.3358	0.0011896	509.2693105940911	17.08	0.75059	16.598	16.241	16.991	-0.48256					34	16	3	0	0	0	0.89494	1	231	231		37.159	0	1	540950	+		45159	16178	30299	30312	51086	51086					0.014969534938245488
QLCKSVLPE	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QLCKSVLPE_					1	0	0			REV__ENST00000309993.2_1_3:135913954-135914020:-|nuORF	REV__ENST00000309993.2_1_3:135913954-135914020:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.7804565429688	2	529.781167	1057.54778	-0.3691	-0.00019554	0.41561	0.00022018	0.046502	2.4636E-05	529.7811640199199	55.532	0.95031	55.495	55.207	56.157	-0.036827					76	33	3	0	0	0	0.67345	1	4646	4646		42.396	8.8806	1	498070	+		45160	24878	30300	30313	51087	51087					0.021309635057150444
QLCKSVLPE	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QLCKSVLPE_					1	0	0			REV__ENST00000309993.2_1_3:135913954-135914020:-|nuORF	REV__ENST00000309993.2_1_3:135913954-135914020:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	529.781167	1057.54778	0.94556	0.00050094	-2.7606	-0.0014625	-1.815	-0.00096155	529.7789992937154	54.851	0.71315	55.257	54.822	55.535	0.40663	-0.14768	-0.0027582	NaN	42.396	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	407080	+		45161	24878	30300	30313							0.021309635057150444
QLCKSVLPE	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))QLCKSVLPE_					1	0	0			REV__ENST00000309993.2_1_3:135913954-135914020:-|nuORF	REV__ENST00000309993.2_1_3:135913954-135914020:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	529.781167	1057.54778	-0.23155	-0.00012267	-1.3317	-0.00070553	-1.5633	-0.0008282	529.7797014449872	54.622	0.58899	55.19	54.858	55.447	0.56836	-0.21492	-0.0012442	NaN	42.396	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	375620	+		45162	24878	30300	30313							0.021309635057150444
QLDDLQTKF	9	Unmodified	_QLDDLQTKF_					0	0	0		ENSG00000132259|ENST00000379936|CNGA4	ENSG00000132259|ENST00000379936|CNGA4	ENSG00000132259|ENST00000379936|CNGA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.2862548828125	2	554.287671	1106.56079	0.7182	0.00039809	-1.2345	-0.00068425	-0.51625	-0.00028615	554.2868521242876	60.037	1.294	60.005	59.612	60.906	-0.031727					86	35	4	0	0	0	0.54908	1	5704	5704		49.536	3.5638	1	1840800			45163	3773	30301	30314	51088	51088					0.011771178894605328
QLDDPGRGQS	10	Unmodified	_QLDDPGRGQS_					0	0	0			REV__ENST00000379061.8_1_17:26708312-26722930:+|nuORF	REV__ENST00000379061.8_1_17:26708312-26722930:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	537.3006591796875	2	536.754527	1071.4945	0.018342	9.845E-06	3.8137	0.002047	3.832	0.0020568	536.756026739411	50.204	0.47887	50.2	49.912	50.391	-0.0030327					14	11	2	0	0	0	0.37624	1	4235	4235		37.508	0	1	49140	+		45164	16056	30302	30315	51089	51089					-0.03838697952551229
QLDTLKAR	8	Unmodified	_QLDTLKAR_					0	0	0		ENST00000543590.1_1_12:123355407-123355842:-|nuORF;ENSG00000139722|ENST00000267202|VPS37B	ENST00000543590.1_1_12:123355407-123355842:-|nuORF	ENST00000543590.1_1_12:123355407-123355842:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7938537597656	2	472.779816	943.545079	0.022419	1.0599E-05	0.47811	0.00022604	0.50053	0.00023664	472.7798511417001	26.546	0.49783	26.371	26.115	26.613	-0.17559					18	10	2	0	0	0	0.4196	1	1469	1469		40.778	0	1	19559			45165	13556	30303	30316	51090	51090					0.07104876163089102
QLDWTRLT	8	Unmodified	_QLDWTRLT_					0	0	0			REV__nc|ENSG00000179698|A6NE52-2|WDR97	REV__nc|ENSG00000179698|A6NE52-2|WDR97	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7772216796875	2	516.777274	1031.53999	-1.0031	-0.00051839	0.65091	0.00033638	-0.3522	-0.00018201	516.777785348129	47.235	0.75013	48.158	47.871	48.622	0.92315					61	18	4	0	0	0	0.81485	1	4492	4492		62.107	12.571	1	3052700	+		45166	22350	30304	30317	51091	51091					0.02548572300474916
QLEAKPLLPP	10	Unmodified	_QLEAKPLLPP_					0	0	0			REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3325805664062	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.74274	2	9748	9701;9748		42.396	3.1433	1	2365500	+		45167	20501	30305	30318	51092;51093	51093					0.10615462062582992
QLEELKKDS	9	Unmodified	_QLEELKKDS_					0	0	0		ENST00000513194.1_1_Y:21636782-21643633:-|nuORF	ENST00000513194.1_1_Y:21636782-21643633:-|nuORF	ENST00000513194.1_1_Y:21636782-21643633:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.317138671875	2	545.292953	1088.57135	-1.4317	-0.00078072	-1.1361	-0.00061953	-2.5679	-0.0014003	545.2925233243249	90.802	0.23608	91.273	91.124	91.36	0.47068					6	5	2	0	0	0	0.20789	1	10779	10779		39.253	0	1	114420			45168	13046	30306	30319	51094	51094					0.03061100543914108
QLEEPLSEY	9	Unmodified	_QLEEPLSEY_					0	0	0			REV__ENSG00000105401|ENST00000222005|CDC37	REV__ENSG00000105401|ENST00000222005|CDC37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2670288085938	2	554.263862	1106.51317	0.12713	7.0464E-05	-2.9017	-0.0016083	-2.7745	-0.0015378	554.2620078315325	55.424	1.2545	55.825	54.901	56.156	0.40101					76	29	3	0	0	0	0.17307	2	5664	5664;5675		79.451	13.022	1	875290	+		45169	17537	30307	30320	51095;51096	51095					-0.03582581101386495
QLEEPLSEY	9	Unmodified	_QLEEPLSEY_					0	0	0			REV__ENSG00000105401|ENST00000222005|CDC37	REV__ENSG00000105401|ENST00000222005|CDC37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.2643432617188	2	554.263862	1106.51317	-0.11656	-6.4607E-05	-2.5998	-0.0014409	-2.7163	-0.0015056	554.2620387935995	55.119	1.2151	55.687	54.901	56.116	0.56836					63	28	3	0	0	0	0.38563	1	5632	5632		58.782	0	1	791590	+		45170	17537	30307	30320	51097	51097					-0.03582581101386495
QLEIKTKFV	9	Unmodified	_QLEIKTKFV_					0	0	0			REV__ENST00000374234.1_1_9:115449830-115480332:-|nuORF	REV__ENST00000374234.1_1_9:115449830-115480332:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3325805664062	2	553.334424	1104.6543	-0.75754	-0.00041917	-2.8743	-0.0015905	-3.6319	-0.0020096	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.74721	2	10197	10197;10221		37.159	2.9866	1	4355400	+		45171	25783	30308	30321	51098;51099	51098					0.10615462062560255
QLEIKTKFV	9	Unmodified	_QLEIKTKFV_					0	0	0			REV__ENST00000374234.1_1_9:115449830-115480332:-|nuORF	REV__ENST00000374234.1_1_9:115449830-115480332:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.3328247070312	2	553.334424	1104.6543	0.28517	0.0001578	-3.9073	-0.002162	-3.6221	-0.0020042	553.3321125200671	96.704	2.3133	96.935	96.395	98.708	0.23103					137	53	4	0	0	0	0.77244	1	9953	9953		32.812	1.2826	1	3367100	+		45172	25783	30308	30321	51100	51100					0.10615462062560255
QLEIKTKFV	9	Unmodified	_QLEIKTKFV_					0	0	0			REV__ENST00000374234.1_1_9:115449830-115480332:-|nuORF	REV__ENST00000374234.1_1_9:115449830-115480332:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.3324584960938	2	553.334424	1104.6543	0.81959	0.00045351	-4.4582	-0.0024669	-3.6386	-0.0020134	553.3317918445606	96.793	1.7474	96.956	96.403	98.15	0.16317					118	40	4	0	0	0	0.76764	2	9961	9961;10023		34.173	6.2903	1	2701500	+		45173	25783	30308	30321	51101;51102	51101					0.10615462062560255
QLEIKTKFV	9	Unmodified	_QLEIKTKFV_					0	0	0			REV__ENST00000374234.1_1_9:115449830-115480332:-|nuORF	REV__ENST00000374234.1_1_9:115449830-115480332:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3323974609375	2	553.334424	1104.6543	-1.4413	-0.00079751	-2.1828	-0.0012078	-3.6241	-0.0020053	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.76255	2	9945	9945;9971		35.618	0.48021	1	2490200	+		45174	25783	30308	30321	51103;51104	51103					0.10615462062560255
QLELITYLI	9	Unmodified	_QLELITYLI_					0	0	0			REV__nc|ENSG00000184313|Q68CQ1-9|MROH7	REV__nc|ENSG00000184313|Q68CQ1-9|MROH7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.3324584960938	2	553.328808	1104.64306	2.7435	0.0015181	3.7877	0.0020958	6.5312	0.0036139	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.74721	1	10433	10433		37.159	4.3467	1	4237100	+		45175	22663	30309	30322	51105	51105					0.09492639968402727
QLELLLGG	8	Unmodified	_QLELLLGG_					0	0	0		ENST00000558383.1_1_15:45393877-45400429:-|nuORF;nc|ENSG00000140279|Q9NRD8|DUOX2;ENSG00000140279|ENST00000389039|DUOX2	ENST00000558383.1_1_15:45393877-45400429:-|nuORF	ENST00000558383.1_1_15:45393877-45400429:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7518005371094	2	421.752736	841.490919	-1.7782	-0.00074997	0.91991	0.00038797	-0.85831	-0.000362	421.75218958440666	77.386	3.85	77.511	77.102	80.952	0.12485					260	132	4	0	0	0	0.81548	1	7295	7295		20.482	1.1219	1	434130			45176	4420	30310	30323	51106	51106					0.06383284011531032
QLESFGGDREL	11	Unmodified	_QLESFGGDREL_					0	0	0			REV__ENSG00000172167|ENST00000305949|MTBP	REV__ENSG00000172167|ENST00000305949|MTBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	625.806640625	2	625.804217	1249.59388	-0.20088	-0.00012571	4.1006	0.0025662	3.8997	0.0024404	625.8067206990463	74.37	1.1963	74.761	74.416	75.612	0.39111					67	28	4	0	0	0	0.31387	3	8363	8363;8385;8398		72.879	16.445	1	2980400	+		45177	21807	30311	30324	51107;51108;51109	51107					-0.020933000584591355
QLESFGGDREL	11	Unmodified	_QLESFGGDREL_					0	0	0			REV__ENSG00000172167|ENST00000305949|MTBP	REV__ENSG00000172167|ENST00000305949|MTBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.8062744140625	2	625.804217	1249.59388	0.81062	0.00050729	3.0535	0.0019109	3.8641	0.0024182	625.806094224884	74.203	1.1646	74.762	74.455	75.62	0.5589					78	27	4	0	0	0	0.26196	1	8373	8373		76.17	10.704	1	2889400	+		45178	21807	30311	30324	51110	51110					-0.020933000584591355
QLESFGGDREL	11	Unmodified	_QLESFGGDREL_					0	0	0			REV__ENSG00000172167|ENST00000305949|MTBP	REV__ENSG00000172167|ENST00000305949|MTBP	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	625.804217	1249.59388	0.81062	0.00050729	3.0535	0.0019109	3.8641	0.0024182	625.806094224884	74.203	1.1646	74.762	74.455	75.62	0.5589	0.00051016	-0.00066111	NaN	76.17	78	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2889400	+		45179	21807	30311	30324							-0.020933000584591355
QLFDKGDL	8	Unmodified	_QLFDKGDL_					0	0	0			REV__ENSG00000126814|ENST00000261249|TRMT5	REV__ENSG00000126814|ENST00000261249|TRMT5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72332763671875	2	468.245275	934.475997	1.5636	0.00073216	-2.6849	-0.0012572	-1.1213	-0.00052506	468.24393939055693	104.95	1.9475	105.11	104.25	106.2	0.15583					117	51	4	0	0	0	0.4196	1	12671	12671		37.159	11.709	1	962920	+		45180	18713	30312	30325	51111	51111					0.006137921435083626
QLFGILDVL	9	Unmodified	_QLFGILDVL_					0	0	0		nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1;ENSG00000144426|ENST00000683969|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.3058166503906	2	509.302593	1016.59063	1.9599	0.00099817	4.2752	0.0021774	6.2351	0.0031756	509.30464157571356	93.196	1.6755	93.134	92.591	94.267	-0.06144					130	39	5	0	0	0	0.76255	1	9851	9851		35.618	2.8059	1	3032400			45181	4707	30313	30326	51112	51112					0.08300101625445677
QLFIKHVRL	9	Unmodified	_QLFIKHVRL_					0	0	0		ENST00000471370.5_1_12:58007928-58008279:+|nuORF	ENST00000471370.5_1_12:58007928-58008279:+|nuORF	ENST00000471370.5_1_12:58007928-58008279:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.3660278320312	2	577.36385	1152.71315	3.0575	0.0017653	1.3884	0.0008016	4.4459	0.0025669	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.62081	1	11129	11129		45.952	1.5748	1	11111000			45182	12239	30314	30327	51113	51113					0.14289983147546081
QLFIWFVFIA	10	Unmodified	_QLFIWFVFIA_					0	0	0			REV__nc|ENSG00000112706|Q17R60-2|IMPG1	REV__nc|ENSG00000112706|Q17R60-2|IMPG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.364501953125	2	642.362985	1282.71142	0.9424	0.00060536	-2.0687	-0.0013288	-1.1263	-0.00072347	642.3625500461095	111.89	0.67577	111.96	111.47	112.15	0.069542					73	20	4	0	0	0	0.86452	1	12001	12001		30.504	2.6214	1	15356000	+		45183	17961	30315	30328	51114	51114					0.08136929338934351
QLFPLAVEAF	10	Unmodified	_QLFPLAVEAF_					0	0	0		ENST00000413282.6_1_1:156552045-156554937:+|nuORF;ENSG00000187862|ENST00000368236|TTC24	ENST00000413282.6_1_1:156552045-156554937:+|nuORF	ENST00000413282.6_1_1:156552045-156554937:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3626708984375	2	567.813325	1133.6121	-1.1616	-0.00065958	-2.2284	-0.0012653	-3.39	-0.0019249	568.3134957873275	42.844	0.16568	43.277	43.17	43.336	0.4334					6	3	2	0	0	0	0.37624	1	3844	3844		25.574	0	1	77618			45184	7889	30316	30329	51115	51115					0.05063486654148619
QLFQRPNAL	9	Unmodified	_QLFQRPNAL_					0	0	0		chr1:30981405-30982540|14|14.21|0.77|4.2|-|0|TE_info:L4_B_Mam,L4_B_Mam_dup20,RTE-X,LINE,donor,-,30982540,30982746|PUM1,None|5;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1;ENSG00000134644|ENST00000426105|PUM1	chr1:30981405-30982540|14|14.21|0.77|4.2|-|0|TE_info:L4_B_Mam,L4_B_Mam_dup20,RTE-X,LINE,donor,-,30982540,30982746|PUM1,None|5	chr1:30981405-30982540|14|14.21|0.77|4.2|-|0|TE_info:L4_B_Mam,L4_B_Mam_dup20,RTE-X,LINE,donor,-,30982540,30982746|PUM1,None|5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	543.8069458007812	2	543.806365	1085.59818	-0.23873	-0.00012982	0.62814	0.00034159	0.38941	0.00021176	543.8065840545032	54.352	0.51954	54.346	54.118	54.638	-0.0055237					29	20	2	0	0	0	0.47272	1	4789	4789		53.351	9.2347	1	136840			45185	47	30317	30330	51116	51116					0.05880253945747427
QLFQRPNAL	9	Unmodified	_QLFQRPNAL_					0	0	0		chr1:30981405-30982540|14|14.21|0.77|4.2|-|0|TE_info:L4_B_Mam,L4_B_Mam_dup20,RTE-X,LINE,donor,-,30982540,30982746|PUM1,None|5;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1;ENSG00000134644|ENST00000426105|PUM1	chr1:30981405-30982540|14|14.21|0.77|4.2|-|0|TE_info:L4_B_Mam,L4_B_Mam_dup20,RTE-X,LINE,donor,-,30982540,30982746|PUM1,None|5	chr1:30981405-30982540|14|14.21|0.77|4.2|-|0|TE_info:L4_B_Mam,L4_B_Mam_dup20,RTE-X,LINE,donor,-,30982540,30982746|PUM1,None|5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.8050537109375	2	543.806365	1085.59818	0.17093	9.2954E-05	-0.064513	-3.5082E-05	0.10642	5.7871E-05	543.8062541764675	54.364	0.53967	54.39	54.141	54.681	0.025612					29	19	2	0	0	0	0.62081	1	4821	4821		45.952	14.422	1	122220			45186	47	30317	30330	51117	51117					0.05880253945747427
QLFWRLWKTIL	11	Unmodified	_QLFWRLWKTIL_					0	0	0		ENST00000378809.8_1_12:70194050-70195428:+|nuORF	ENST00000378809.8_1_12:70194050-70195428:+|nuORF	ENST00000378809.8_1_12:70194050-70195428:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.9683532714844	3	501.966007	1502.87619	0.21344	0.00010714	4.1341	0.0020752	4.3475	0.0021823	501.9680903121297	33.907	0.95065	34.105	33.766	34.717	0.19865					69	22	4	0	0	0	0.76892	1	2468	2468		17.833	7.7292	1	3500100			45187	10876	30318	30331	51118	51118					0.14486741478731346
QLGAHVIRRT	10	Unmodified	_QLGAHVIRRT_					0	0	0			REV__ENSG00000113716|ENST00000502717|HMGXB3	REV__ENSG00000113716|ENST00000502717|HMGXB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8425903320312	2	575.843813	1149.67307	0.80402	0.00046299	-2.4364	-0.001403	-1.6324	-0.00094001	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.73395	1	9203	9203		42.864	2.0861	1	6947200	+		45188	18008	30319	30332	51119	51119					0.10422436476960684
QLGAHVIRRT	10	Unmodified	_QLGAHVIRRT_					0	0	0			REV__ENSG00000113716|ENST00000502717|HMGXB3	REV__ENSG00000113716|ENST00000502717|HMGXB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.8424072265625	2	575.843813	1149.67307	0.59662	0.00034356	-1.4839	-0.00085451	-0.88731	-0.00051095	575.8427619887541	92.087	2.9467	92.534	91.461	94.407	0.44661					232	71	4	0	0	0	0.86218	1	10839	10839		32.812	2.3088	1	1986600	+		45189	18008	30319	30332	51120	51120					0.10422436476960684
QLGDDGKLGP	10	Unmodified	_QLGDDGKLGP_					0	0	0			REV__ENSG00000188153|ENST00000328300|COL4A5	REV__ENSG00000188153|ENST00000328300|COL4A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.257080078125	2	500.258914	998.503274	0.063706	3.1869E-05	-4.2379	-0.00212	-4.1742	-0.0020882	500.25660582831534	52.55	0.86823	53.164	52.828	53.696	0.61436					41	20	3	0	0	0	0.80179	1	5312	5312		39.253	5.0803	1	1126100	+		45190	22980	30320	30333	51121	51121					0.0039627568389732915
QLGFPCSPE	9	Unmodified	_QLGFPCSPE_					0	0	0			REV__ENST00000553116.5_1_12:56387744-56387879:+|nuORF	REV__ENST00000553116.5_1_12:56387744-56387879:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.23675537109375	2	489.223485	976.432418	-0.76825	-0.00037584	-1.3076	-0.0006397	-2.0758	-0.0010155	489.2233622117428	63.097	0.1968	63.12	63.064	63.261	0.022984					10	7	2	0	0	0	0.20789	1	5512	5512		24.203	0	1	35322	+		45191	28639	30321	30334	51122	51122					-0.0567414062526268
QLGKKKVLSGE	11	Unmodified	_QLGKKKVLSGE_					0	0	0			REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	593.8601684570312	2	593.861338	1185.70812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.111	1	59.664	59.164	60.164	0.55323								0	0	0	0.56276	1	6232	6232		44.377	3.599	1		+		45192	17010	30322	30335	51123	51123					0.122696344942824
QLGPFRSY	8	Unmodified	_QLGPFRSY_					0	0	0			REV__ENST00000302351.8_1_5:73936651-73937086:-|nuORF	REV__ENST00000302351.8_1_5:73936651-73937086:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2682189941406	2	484.253434	966.492316	-0.72074	-0.00034902	3.1005	0.0015014	2.3797	0.0011524	484.2549882809921	59.264	0.81999	59.654	59.275	60.095	0.39077					28	19	2	0	0	0	0.4196	1	6263	6263		24.203	15.971	1	842950	+		45193	24781	30323	30336	51124	51124					0.0077291810027873
QLGPRHANI	9	Unmodified	_QLGPRHANI_					0	0	0			REV__nc|ENSG00000143365|P51449-2|RORC	REV__nc|ENSG00000143365|P51449-2|RORC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.25811767578125	2	503.283057	1004.55156	0.33231	0.00016724	1.9062	0.00095935	2.2385	0.0011266	503.28425774560634	70.994	0.70515	71.542	71.2	71.905	0.54756					30	16	3	0	0	0	0.20789	1	7919	7919		29.15	2.4566	1	127100	+		45194	19796	30324	30337	51125	51125					0.049468141144643596
QLGPRHANI	9	Unmodified	_QLGPRHANI_					0	0	0			REV__nc|ENSG00000143365|P51449-2|RORC	REV__nc|ENSG00000143365|P51449-2|RORC	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	503.283057	1004.55156	-0.86686	-0.00043628	3.5447	0.001784	2.6778	0.0013477	503.2846896384863	71.052	0.66566	71.437	71.168	71.834	0.38449	-0.052504	0.00061151	NaN	29.15	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138710	+		45195	19796	30324	30337							0.049468141144643596
QLGPTGQGLI	10	Unmodified	_QLGPTGQGLI_					0	0	0			REV__nc|ENSG00000090612|Q14587-6|ZNF268	REV__nc|ENSG00000090612|Q14587-6|ZNF268	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.2798767089844	2	492.279649	982.544745	-1.2168	-0.00059902	1.544	0.00076009	0.32719	0.00016107	492.280280433145	26.498	0.59713	26.465	26.1	26.697	-0.032125					18	12	2	0	0	0	0.6116	1	1133	1133		49.442	5.0644	1	40689	+		45196	16992	30325	30338	51126	51126					0.052774564432638726
QLGRKLITK	9	Unmodified	_QLGRKLITK_					0	0	0		nc|ENSG00000113734|Q12981-2|BNIP1;nc|ENSG00000113734|Q12981-3|BNIP1;ENSG00000113734|ENST00000351486|BNIP1;nc|ENSG00000113734|Q12981-1|BNIP1	nc|ENSG00000113734|Q12981-2|BNIP1	nc|ENSG00000113734|Q12981-2|BNIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.8475952148438	2	528.848033	1055.68151	0.19379	0.00010249	-0.48897	-0.00025859	-0.29518	-0.00015611	528.8476755921713	20.367	0.49452	19.737	19.536	20.03	-0.6296					23	10	3	0	0	0	0.6204	1	642	642		45.972	1.5951	1	217580			45197	14853	30326	30339	51127	51127					0.15589990393596054
QLGRLCDILD	10	Unmodified	_QLGRLCDILD_					0	0	0		ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH	ENSG00000103599|ENST00000335894|IQCH	ENSG00000103599|ENST00000335894|IQCH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.8025512695312	2	573.302798	1144.59104	-0.43257	-0.000248	-1.8857	-0.0010811	-2.3183	-0.0013291	573.3015257531335	72.569	0.63763	72.529	72.246	72.883	-0.04039					52	22	3	0	0	0	0.80179	1	7078	7078		39.253	3.6345	1	243080			45198	2094	30327	30340	51128	51128					0.024531532830224023
QLGYAAAR	8	Unmodified	_QLGYAAAR_					0	0	0		nc|ENSG00000063176|Q9NRA0-4|SPHK2;nc|ENSG00000063176|Q9NRA0-2|SPHK2;ENSG00000063176|ENST00000245222|SPHK2;nc|ENSG00000063176|Q9NRA0-5|SPHK2;nc|ENSG00000063176|Q9NRA0-3|SPHK2	nc|ENSG00000063176|Q9NRA0-4|SPHK2	nc|ENSG00000063176|Q9NRA0-4|SPHK2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.3057556152344	2	425.232502	848.450451	0.047379	2.0147E-05	1.715	0.00072928	1.7624	0.00074943	425.23319238378343	34.302	0.8344	34.257	33.79	34.624	-0.045815					52	33	2	0	0	0	0.4196	1	1754	1754		12.207	0	1	179320			45199	1088	30328	30341	51129	51129					0.020163624117458312
QLHGVGPAPGG	11	Unmodified	_QLHGVGPAPGG_					0	0	0			REV__ENST00000416602.6_1_7:66767701-66771051:+|nuORF	REV__ENST00000416602.6_1_7:66767701-66771051:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2597961425781	2	495.261791	988.509028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.182	1	35.429	34.929	35.929	0.24769								0	0	0	0.56276	1	2666	2666		34.173	3.6689	1		+		45200	26436	30329	30342	51130	51130					0.014314189862375315
QLHLRVRPT	9	Unmodified	_QLHLRVRPT_					0	0	0		ENSG00000153303|ENST00000283309|FRMD1;nc|ENSG00000153303|Q8N878-2|FRMD1	ENSG00000153303|ENST00000283309|FRMD1	ENSG00000153303|ENST00000283309|FRMD1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3429565429688	2	560.340907	1118.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.63	1	115.65	115.15	116.15	0.026466								0	0	0	0.32469	1	12688	12688		21.96	2.8564	1				45201	5231	30330	30343	51131	51131					0.11267337965318802
QLHTRLFTKRK	11	Unmodified	_QLHTRLFTKRK_					0	0	0			REV__ENSG00000147251|ENST00000276202|DOCK11	REV__ENSG00000147251|ENST00000276202|DOCK11	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.62554931640625	3	476.624643	1426.8521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.27	1	116.29	115.79	116.79	0.026466								0	0	0	0.56276	1	12772	12772		12.433	2.3289	1		+		45202	20062	30331	30344	51132	51132					0.15574901045056322
QLHWRRWKRRL	11	Unmodified	_QLHWRRWKRRL_					0	0	0			REV__nc|ENSG00000114812|P32241-4|VIPR1	REV__nc|ENSG00000114812|P32241-4|VIPR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.396484375	3	545.658681	1633.95422	3.7483	0.0020453	-0.37269	-0.00020336	3.3756	0.001842	545.658582445839	105.42	0.82294	105.61	105.33	106.15	0.18647					27	20	2	0	0	0	0.18238	1	12942	12942		13.508	12.089	1	76365	+		45203	18068	30332	30345	51133	51133					0.16259611907321414
QLHWRRWKRRL	11	Unmodified	_QLHWRRWKRRL_					0	0	0			REV__nc|ENSG00000114812|P32241-4|VIPR1	REV__nc|ENSG00000114812|P32241-4|VIPR1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	545.658681	1633.95422	-0.47725	-0.00026042	3.1056	0.0016946	2.6284	0.0014342	545.6607015595629	105.72	0.81624	105.72	105.16	105.97	0	0.060522	0.0012614	NaN	13.508	33	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85230	+		45204	18068	30332	30345							0.16259611907321414
QLHWRRWKRRL	11	Unmodified	_QLHWRRWKRRL_					0	0	0			REV__nc|ENSG00000114812|P32241-4|VIPR1	REV__nc|ENSG00000114812|P32241-4|VIPR1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	545.658681	1633.95422	0.84708	0.00046221	2.7759	0.0015147	3.623	0.0019769	545.9947610029176	105.55	0.76646	105.66	105.43	106.2	0.10765	-0.0058298	0.0007217	NaN	13.508	26	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86319	+		45205	18068	30332	30345							0.16259611907321414
QLIAVNVIN	9	Unmodified	_QLIAVNVIN_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|52|2|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|52|2|sense	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.298583984375	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.344	1	59.344	58.844	59.844	0								0	0	0	0.37744	1	5158	5158		51.335	13.524	1		+		45206	29554	30333	30346	51134	51134					0.08914333339942004
QLIDKVWQL	9	Unmodified	_QLIDKVWQL_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.831787109375	2	571.832049	1141.64954	0.52232	0.00029868	-0.23599	-0.00013495	0.28633	0.00016373	571.8317305626368	76.468	0.71038	76.593	76.218	76.929	0.12486					65	24	4	0	0	0	0.11055	3	7155	7139;7155;7167		90.37	18.492	1	605570			45207	3599	30334	30347	51135;51136;51137	51136					0.08438577919810086
QLIDKVWQL	9	Unmodified	_QLIDKVWQL_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.8312377929688	2	571.832049	1141.64954	0.65309	0.00037346	-0.56066	-0.0003206	0.092423	5.2851E-05	571.831622562202	76.36	0.70596	76.493	76.172	76.878	0.13325					61	24	4	0	0	0	0.11055	3	7152	7134;7143;7152		90.37	18.492	1	512960			45208	3599	30334	30347	51138;51139;51140	51140					0.08438577919810086
QLIDKVWQL	9	Unmodified	_QLIDKVWQL_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.8318481445312	2	571.832049	1141.64954	-0.97293	-0.00055635	1.2038	0.00068836	0.23085	0.000132	571.8326145712639	76.467	0.58675	76.557	76.254	76.841	0.089363					62	21	4	0	0	0	0.28163	2	7115	7115;7139		66.429	13.493	1	535810			45209	3599	30334	30347	51141;51142	51141					0.08438577919810086
QLIGITSLFI	10	Unmodified	_QLIGITSLFI_					0	0	0		ENSG00000175305|ENST00000308108|CCNE2	ENSG00000175305|ENST00000308108|CCNE2	ENSG00000175305|ENST00000308108|CCNE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8328857421875	2	552.8368	1103.65905	-0.73052	-0.00040386	-4.4671	-0.0024696	-5.1977	-0.0028735	552.8344975147925	83.134	0.85608	83.134	82.73	83.586	0					37	21	2	0	0	0	0.86718	1	7775	7775		27.882	0	1	88048			45210	7006	30335	30348	51143	51143					0.11136346205330483
QLIGKEILHTK	11	Unmodified	_QLIGKEILHTK_					0	0	0			REV__ENSG00000163624|ENST00000295887|CDS1	REV__ENSG00000163624|ENST00000295887|CDS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3030090332031	3	427.2626	1278.76597	-0.64245	-0.00027449	3.0526	0.0013042	2.4101	0.0010298	427.2630104261294	62.299	0.30401	62.687	62.535	62.839	0.38846					9	6	2	0	0	0	0.17243	1	6680	6680		28.577	0	1	32791	+		45211	20945	30336	30349	51144	51144					0.13773896419684206
QLIGRGRASL	10	Unmodified	_QLIGRGRASL_					0	0	0			REV__nc|ENSG00000148842|Q9H8M5-3|CNNM2	REV__nc|ENSG00000148842|Q9H8M5-3|CNNM2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	536.2628784179688	2	535.825089	1069.63563	-1.2709	-0.00068098	-4.119	-0.002207	-5.3899	-0.002888	535.822709520844	52.315	2.4282	52.315	51.056	53.484	0					97	46	3	0	0	0	0.37624	1	4172	4172		36.447	22.31	1	282960	+		45212	20141	30337	30350	51145	51145					0.10359345211372784
QLIHPLGG	8	Unmodified	_QLIHPLGG_					0	0	0			REV__nc|ENSG00000132879|Q9H4M3-2|FBXO44	REV__nc|ENSG00000132879|Q9H4M3-2|FBXO44	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2574157714844	2	417.745245	833.475937	1.1693	0.00048848	-0.83949	-0.00035069	0.32983	0.00013778	417.7446569189357	23.393	0.3915	23.011	22.762	23.153	-0.38178					14	8	2	0	0	0	0.4196	1	1039	1039		20.482	11.66	1	39367	+		45213	29848	30338	30351	51146	51146					0.05253836934195988
QLILVLVIL	9	Unmodified	_QLILVLVIL_					0	0	0			REV__ENSG00000116138|ENST00000375847|DNAJC16	REV__ENSG00000116138|ENST00000375847|DNAJC16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.3604125976562	2	512.362453	1022.71035	-0.052808	-2.7057E-05	-2.2805	-0.0011684	-2.3333	-0.0011955	512.3611914628581	74.266	1.3455	74.309	74.086	75.431	0.0429					113	47	3	0	0	0	0.7932	1	7133	7133		19.36	1.0356	1	281850	+		45214	18182	30339	30352	51147	51147					0.1999071497003797
QLIQKPASVSA	11	Unmodified	_QLIQKPASVSA_					0	0	0			REV__ENSG00000185950|ENST00000375856|IRS2	REV__ENSG00000185950|ENST00000375856|IRS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.3311157226562	2	571.332413	1140.65027	-1.3827	-0.00078998	-1.153	-0.00065874	-2.5357	-0.0014487	571.3317717910289	102.19	3.5699	102.32	101.59	105.16	0.1357					156	88	4	0	0	0	0.72739	1	10694	10694		27.047	0.98393	1	3715400	+		45215	22811	30340	30353	51148	51148					0.08557372568861865
QLISSRTLKLH	11	Unmodified	_QLISSRTLKLH_					0	0	0		nc|ENSG00000082269|Q9P2D6-4|FAM135A;ENSG00000082269|ENST00000418814|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-2|FAM135A;ENST00000393299.6_1_6:71138108-71233862:+|nuORF	nc|ENSG00000082269|Q9P2D6-4|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3921508789062	2	648.393336	1294.77212	-0.0023386	-1.5163E-06	-0.87161	-0.00056515	-0.87395	-0.00056666	648.3926215212863	106.57	0.85555	106.54	106.01	106.87	-0.025146					71	19	4	0	0	0	0.62614	2	11542	11542;11553		41.427	4.9799	1	19156000			45216	1483	30341	30354	51149;51150	51149					0.13652414651232903
QLISSRTLKLH	11	Unmodified	_QLISSRTLKLH_					0	0	0		nc|ENSG00000082269|Q9P2D6-4|FAM135A;ENSG00000082269|ENST00000418814|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-2|FAM135A;ENST00000393299.6_1_6:71138108-71233862:+|nuORF	nc|ENSG00000082269|Q9P2D6-4|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.392333984375	2	648.393336	1294.77212	2.6473	0.0017165	-3.5685	-0.0023138	-0.92115	-0.00059727	648.3908884221966	106.46	0.85558	106.43	105.94	106.79	-0.034134					69	19	4	0	0	0	0.6493	2	11792	11792;11805		38.754	4.832	1	16306000			45217	1483	30341	30354	51151;51152	51151					0.13652414651232903
QLISSRTLKLH	11	Unmodified	_QLISSRTLKLH_					0	0	0		nc|ENSG00000082269|Q9P2D6-4|FAM135A;ENSG00000082269|ENST00000418814|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-2|FAM135A;ENST00000393299.6_1_6:71138108-71233862:+|nuORF	nc|ENSG00000082269|Q9P2D6-4|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3931274414062	2	648.393336	1294.77212	1.8787	0.0012181	-2.609	-0.0016917	-0.73035	-0.00047355	648.3915145457087	107.1	1.2973	107.13	106.67	107.97	0.035622					111	30	4	0	0	0	0.59499	3	11831	11700;11831;11843		45.022	13.388	1	42934000			45218	1483	30341	30354	51153;51154;51155	51154					0.13652414651232903
QLISSRTLKLH	11	Unmodified	_QLISSRTLKLH_					0	0	0		nc|ENSG00000082269|Q9P2D6-4|FAM135A;ENSG00000082269|ENST00000418814|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-2|FAM135A;ENST00000393299.6_1_6:71138108-71233862:+|nuORF	nc|ENSG00000082269|Q9P2D6-4|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3924560546875	2	648.393336	1294.77212	1.6039	0.00104	-2.3204	-0.0015045	-0.71644	-0.00046454	648.3917432358439	106.08	2.1363	106.23	104.51	106.65	0.14843					114	53	4	0	0	0	0.732	1	11388	11388		26.063	3.4837	1	52760000			45219	1483	30341	30354	51156	51156					0.13652414651232903
QLISSRTLKLH	11	Unmodified	_QLISSRTLKLH_					0	0	0		nc|ENSG00000082269|Q9P2D6-4|FAM135A;ENSG00000082269|ENST00000418814|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-2|FAM135A;ENST00000393299.6_1_6:71138108-71233862:+|nuORF	nc|ENSG00000082269|Q9P2D6-4|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3927612304688	2	648.393336	1294.77212	1.6039	0.00104	-2.236	-0.0014498	-0.63213	-0.00040987	648.3917676742469	106.97	1.0935	107.11	106.64	107.73	0.13866					101	26	4	0	0	0	0.72106	1	11460	11460		28.081	2.0181	1	58516000			45220	1483	30341	30354	51157	51157					0.13652414651232903
QLISSRTLKLH	11	Unmodified	_QLISSRTLKLH_					0	0	0		nc|ENSG00000082269|Q9P2D6-4|FAM135A;ENSG00000082269|ENST00000418814|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-2|FAM135A;ENST00000393299.6_1_6:71138108-71233862:+|nuORF	nc|ENSG00000082269|Q9P2D6-4|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.39306640625	2	648.393336	1294.77212	1.6038	0.0010399	-3.2535	-0.0021096	-1.6497	-0.0010697	648.3911787840404	107.84	0.37682	107.98	107.69	108.07	0.13866					32	9	4	0	0	0	0.55601	2	11592	11569;11592		47.96	4.8343	1	42909000			45221	1483	30341	30354	51158;51159	51159					0.13652414651232903
QLISSRTLKLH	11	Unmodified	_QLISSRTLKLH_					0	0	0		nc|ENSG00000082269|Q9P2D6-4|FAM135A;ENSG00000082269|ENST00000418814|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-2|FAM135A;ENST00000393299.6_1_6:71138108-71233862:+|nuORF	nc|ENSG00000082269|Q9P2D6-4|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.392578125	2	648.393336	1294.77212	0.94474	0.00061257	-1.779	-0.0011535	-0.83426	-0.00054093	648.3921194247092	106.15	2.119	106.24	104.58	106.7	0.099007					110	52	4	0	0	0	0.66009	2	11368	11368;11404		37.508	9.4267	1	47497000			45222	1483	30341	30354	51160;51161	51160					0.13652414651232903
QLISSRTLKLH	11	Unmodified	_QLISSRTLKLH_					0	0	0		nc|ENSG00000082269|Q9P2D6-4|FAM135A;ENSG00000082269|ENST00000418814|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-2|FAM135A;ENST00000393299.6_1_6:71138108-71233862:+|nuORF	nc|ENSG00000082269|Q9P2D6-4|FAM135A	nc|ENSG00000082269|Q9P2D6-4|FAM135A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.392333984375	2	648.393336	1294.77212	-1.1412	-0.00073997	0.55376	0.00035906	-0.58747	-0.00038091	648.3936617519867	107.85	0.34956	107.88	107.62	107.97	0.036125					30	8	4	0	0	0	0.638	2	11510	11510;11522		40.058	6.1365	1	41447000			45223	1483	30341	30354	51162;51163	51162					0.13652414651232903
QLIVMTTV	8	Unmodified	_QLIVMTTV_					0	0	0		ENST00000217740.3_1_18:29598343-29598442:+|nuORF	ENST00000217740.3_1_18:29598343-29598442:+|nuORF	ENST00000217740.3_1_18:29598343-29598442:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.7636413574219	2	452.762246	903.50994	-1.309	-0.00059268	3.8108	0.0017254	2.5017	0.0011327	452.76391630275526	39.719	0.69509	39.726	39.418	40.114	0.0065041					32	17	2	0	0	0	0.87922	1	2461	2461		31.955	3.7006	1	173870			45224	9152	30342	30355	51164	51164					0.05432497310914641
QLKAAALP	8	Unmodified	_QLKAAALP_					0	0	0		nc|ENSG00000118495|Q9UM63-2|PLAGL1;ENSG00000118495|ENST00000674357|PLAGL1;chr6:143965313-143966158|31|14.55|0.44|5.03|-|ENST00000650125|PLAGL1,PLAGL1;chr6:143965279-143966158|38|12.58|0.43|4.87|-|ENST00000649211|PLAGL1,PLAGL1	nc|ENSG00000118495|Q9UM63-2|PLAGL1	nc|ENSG00000118495|Q9UM63-2|PLAGL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.76092529296875	2	406.255446	810.496338	-0.57032	-0.00023169	4.298	0.0017461	3.7277	0.0015144	406.2569933600897	67.175	0.92183	67.139	66.614	67.536	-0.03569					61	39	2	0	0	0	0.86791	1	6404	6404		28.254	6.5519	1	69421			45225	468	30343	30356	51165	51165					0.08351007593978466
QLKAAALP	8	Unmodified	_QLKAAALP_					0	0	0		nc|ENSG00000118495|Q9UM63-2|PLAGL1;ENSG00000118495|ENST00000674357|PLAGL1;chr6:143965313-143966158|31|14.55|0.44|5.03|-|ENST00000650125|PLAGL1,PLAGL1;chr6:143965279-143966158|38|12.58|0.43|4.87|-|ENST00000649211|PLAGL1,PLAGL1	nc|ENSG00000118495|Q9UM63-2|PLAGL1	nc|ENSG00000118495|Q9UM63-2|PLAGL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2575378417969	2	406.255446	810.496338	0.40708	0.00016538	3.217	0.0013069	3.624	0.0014723	406.25658192543807	64.684	1.5075	64.808	63.9	65.408	0.12397					94	59	2	0	0	0	0.80706	1	5747	5747		19.36	1.0356	1	141770			45226	468	30343	30356	51166	51166					0.08351007593978466
QLKAAALP	8	Unmodified	_QLKAAALP_					0	0	0		nc|ENSG00000118495|Q9UM63-2|PLAGL1;ENSG00000118495|ENST00000674357|PLAGL1;chr6:143965313-143966158|31|14.55|0.44|5.03|-|ENST00000650125|PLAGL1,PLAGL1;chr6:143965279-143966158|38|12.58|0.43|4.87|-|ENST00000649211|PLAGL1,PLAGL1	nc|ENSG00000118495|Q9UM63-2|PLAGL1	nc|ENSG00000118495|Q9UM63-2|PLAGL1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.255446	810.496338	1.7674	0.000718	2.113	0.0008584	3.8803	0.0015764	406.256145234764	67.078	0.9052	67.106	66.721	67.626	0.02858	-0.045112	-0.0015153	NaN	28.254	50	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60985			45227	468	30343	30356							0.08351007593978466
QLKAAALP	8	Unmodified	_QLKAAALP_					0	0	0		nc|ENSG00000118495|Q9UM63-2|PLAGL1;ENSG00000118495|ENST00000674357|PLAGL1;chr6:143965313-143966158|31|14.55|0.44|5.03|-|ENST00000650125|PLAGL1,PLAGL1;chr6:143965279-143966158|38|12.58|0.43|4.87|-|ENST00000649211|PLAGL1,PLAGL1	nc|ENSG00000118495|Q9UM63-2|PLAGL1	nc|ENSG00000118495|Q9UM63-2|PLAGL1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.8525	-0.00075258	5.3413	0.0021699	3.4888	0.0014173	406.25755107303127	66.784	1.4669	66.917	66.71	68.177	0.13326	-0.23436	0.0011077	NaN	28.254	82	59	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116440			45228	468	30343	30356							0.08351007593978466
QLKADSRLK	9	Unmodified	_QLKADSRLK_					0	0	0		nc|ENSG00000114520|O95219-2|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;ENSG00000114520|ENST00000251775|SNX4	nc|ENSG00000114520|O95219-2|SNX4	nc|ENSG00000114520|O95219-2|SNX4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.8195190429688	2	529.819473	1057.62439	-0.099069	-5.2489E-05	-0.016411	-8.6947E-06	-0.11548	-6.1184E-05	529.8193607415701	28.115	0.83513	28.018	27.707	28.542	-0.096947					47	19	4	0	0	0	0.44421	1	1688	1688		54.776	1.8396	1	740180			45229	2776	30344	30357	51167	51167					0.0978852311720857
QLKADSRLK	9	Unmodified	_QLKADSRLK_					0	0	0		nc|ENSG00000114520|O95219-2|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;ENSG00000114520|ENST00000251775|SNX4	nc|ENSG00000114520|O95219-2|SNX4	nc|ENSG00000114520|O95219-2|SNX4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	529.819473	1057.62439	1.0823	0.0005734	-1.1349	-0.00060129	-0.052636	-2.7887E-05	529.8187670828245	28.176	0.79678	27.922	27.632	28.428	-0.25465	-0.048038	-0.00045022	NaN	54.776	55	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	716660			45230	2776	30344	30357							0.0978852311720857
QLKAKRSL	8	Unmodified	_QLKAKRSL_					0	0	0			REV__ENSG00000134115|ENST00000446702|CNTN6	REV__ENSG00000134115|ENST00000446702|CNTN6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2874755859375	2	472.306001	942.597449	-0.10813	-5.107E-05	-2.8317	-0.0013374	-2.9398	-0.0013885	472.305556963493	95.33	0.74277	95.398	95.098	95.841	0.068344					34	17	3	0	0	0	0.4196	1	9975	9975		20.947	4.4738	1	416140	+		45231	19116	30345	30358	51168	51168					0.12385459296706358
QLKFRACLK	9	Unmodified	_QLKFRACLK_					0	0	0		nc|ENSG00000104093|Q8TDJ6-2|DMXL2;nc|ENSG00000104093|Q8TDJ6|DMXL2;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;ENSG00000104093|ENST00000560891|DMXL2;nc|ENSG00000172869|Q9Y485|DMXL1;ENSG00000172869|ENST00000539542|DMXL1	nc|ENSG00000104093|Q8TDJ6-2|DMXL2;nc|ENSG00000172869|Q9Y485|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8307495117188	2	553.828786	1105.64302	2.0416	0.0011307	0.42617	0.00023602	2.4678	0.0013667	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.7932	1	9720	9720		24.203	0	1	5457600			45232	6802;2114	30346	30359	51169	51169					0.09442361487413109
QLKGGPIV	8	Unmodified	_QLKGGPIV_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.524169921875	2	406.255446	810.496338	0.30114	0.00012234	3.5519	0.001443	3.853	0.0015653	406.25681249873213	49.019	1.8237	49.923	49.21	51.034	0.90424					65	44	2	0	0	0	0.4196	1	4924	4924		26.796	0	1	271400	+		45233	23707	30347	30360	51170	51170					0.08351007593989834
QLKGGPIV	8	Unmodified	_QLKGGPIV_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.255446	810.496338	-1.7386	-0.00070631	5.5567	0.0022574	3.8181	0.0015511	406.25759993259766	49.743	2.2244	49.743	48.693	50.918	0	0.064893	0.0010868	NaN	26.796	100	53	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	215230	+		45234	23707	30347	30360							0.08351007593989834
QLKGGPIV	8	Unmodified	_QLKGGPIV_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.255446	810.496338	2.3056	0.00093668	1.5887	0.0006454	3.8943	0.0015821	406.2559984924016	49.534	2.3468	49.538	48.533	50.88	0.0035973	-0.14007	-0.0021373	NaN	26.796	123	57	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	225190	+		45235	23707	30347	30360							0.08351007593989834
QLKGGPIV	8	Unmodified	_QLKGGPIV_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.8853	-0.00076591	5.6311	0.0022877	3.7459	0.0015218	406.2576439019726	49.498	2.6411	49.523	48.348	50.989	0.025574	-0.15481	0.0011472	NaN	26.796	153	73	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	284080	+		45236	23707	30347	30360							0.08351007593989834
QLKIPRTY	8	Unmodified	_QLKIPRTY_					0	0	0			REV__chr4:169562196-169580842|22|10.05|0.23|5.44|-|1|NEK1,NEK1|1	REV__chr4:169562196-169580842|22|10.05|0.23|5.44|-|1|NEK1,NEK1|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8035583496094	2	509.805834	1017.59712	-0.93407	-0.00047619	-3.0736	-0.0015669	-4.0077	-0.0020431	509.8042014095356	84.682	2.4835	84.682	83.134	85.618	0					128	59	3	0	0	0	0.884	1	8004	8004		33.516	3.0119	1	609880	+		45237	15825	30348	30361	51171	51171					0.08902039576832976
QLKIPRTY	8	Unmodified	_QLKIPRTY_					0	0	0			REV__chr4:169562196-169580842|22|10.05|0.23|5.44|-|1|NEK1,NEK1|1	REV__chr4:169562196-169580842|22|10.05|0.23|5.44|-|1|NEK1,NEK1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.80413818359375	2	509.805834	1017.59712	0.31699	0.0001616	-4.4775	-0.0022826	-4.1605	-0.002121	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.90465	1	10281	10281		40.573	5.4206	1	2635100	+		45238	15825	30348	30361	51172	51172					0.08902039576832976
QLKISNTND	9	Unmodified	_QLKISNTND_					0	0	0			REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|70|2|sense	REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|70|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.281982421875	2	516.769645	1031.52474	-0.30052	-0.0001553	-2.2547	-0.0011652	-2.5552	-0.0013205	516.767955674572	43.747	0.39849	44.197	44.003	44.401	0.45025					14	9	2	0	0	0	0.20789	1	3959	3959		14.865	0	1	296720	+		45239	29492	30349	30362	51173	51173					0.010236607126216768
QLKKELSVALI	11	Unmodified	_QLKKELSVALI_					0	0	0			REV__ENSG00000135914|ENST00000258400|HTR2B	REV__ENSG00000135914|ENST00000258400|HTR2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.392578125	2	621.395013	1240.77547	-0.28789	-0.0001789	-3.4371	-0.0021358	-3.725	-0.0023147	621.392781910036	104.72	2.6015	104.71	104.23	106.84	-0.014809					230	61	5	0	0	0	0.64498	3	11350	11350;11374;11425		39.253	5.0803	1	11881000	+		45240	19267	30350	30363	51174;51175;51176	51174					0.1647166470522734
QLKMDILIKK	10	Oxidation (M)	_QLKM(Oxidation (M))DILIKK_		QLKM(1)DILIKK		QLKM(90)DILIKK	0	0	1		ENST00000442354.1_1_9:44052481-44067763:-|nuORF	ENST00000442354.1_1_9:44052481-44067763:-|nuORF	ENST00000442354.1_1_9:44052481-44067763:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.9244079589844	3	415.92482	1244.75263	0.81946	0.00034083	-0.72183	-0.00030023	0.097637	4.061E-05	415.9244752331545	28.792	0.95755	28.618	28.02	28.977	-0.17336					75	23	4	0	0	0	0.18266	1	1752	1752		90.149	24.871	1	1055100			45241	11791	30351	30364	51177	51177		186			0.14004322316077378
QLKMIGIKKVQ	11	Unmodified	_QLKMIGIKKVQ_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.404541015625	2	643.404858	1284.79516	-0.027625	-1.7774E-05	3.2969	0.0021213	3.2693	0.0021035	643.4069538956494	107.53	1.1842	107.49	106.64	107.82	-0.034401					87	27	4	0	0	0	0.7342	1	11623	11623		25.574	2.9944	1	2502500			45242	4039	30352	30365	51178	51178					0.16415717444328948
QLKMIGIKKVQ	11	Unmodified	_QLKMIGIKKVQ_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4052734375	2	643.404858	1284.79516	2.6791	0.0017238	0.66968	0.00043087	3.3488	0.0021546	643.4052640495355	107.03	1.0145	106.99	106.79	107.81	-0.034134					59	23	3	0	0	0	0.69995	1	11955	11955		31.53	2.3598	1	2103900			45243	4039	30352	30365	51179	51179					0.16415717444328948
QLKMKKRRNL	10	Unmodified	_QLKMKKRRNL_					0	0	0			REV__nc|ENSG00000052749|Q5JTH9-2|RRP12	REV__nc|ENSG00000052749|Q5JTH9-2|RRP12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2625732421875	3	438.943208	1313.80779	-1.3791	-0.00060533	-3.1364	-0.0013767	-4.5155	-0.001982	439.2759414286529	57.536	0.87151	57.93	57.697	58.568	0.39407					24	21	2	0	0	0	0.37624	1	6058	6058		20.837	0.80668	1	87888	+		45244	29691	30353	30366	51180	51180					0.16344173627248892
QLKMKKRRNL	10	Unmodified	_QLKMKKRRNL_					0	0	0			REV__nc|ENSG00000052749|Q5JTH9-2|RRP12	REV__nc|ENSG00000052749|Q5JTH9-2|RRP12	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	438.943208	1313.80779	0.73651	0.00032329	-5.4646	-0.0023986	-4.728	-0.0020753	438.9411724229098	57.458	0.38154	58.013	57.848	58.23	0.55512	0.041853	-0.0023421	NaN	20.837	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78139	+		45245	29691	30353	30366							0.16344173627248892
QLKNPLEIVSI	11	Unmodified	_QLKNPLEIVSI_					0	0	0		ENST00000462663.5_1_3:158415931-158428584:-|nuORF;nc|ENSG00000118849|P49788-2|RARRES1;ENSG00000118849|ENST00000237696|RARRES1	ENST00000462663.5_1_3:158415931-158428584:-|nuORF	ENST00000462663.5_1_3:158415931-158428584:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3841552734375	2	627.37682	1252.73909	6.5832	0.0041301	2.6289	0.0016493	9.2121	0.0057794	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.70737	2	13735	13735;13844		30.318	4.7437	1	94412			45246	3045	30354	30367	51181;51182	51181					0.12282787808499052
QLKPWLRLAL	10	Unmodified	_QLKPWLRLAL_					0	0	0			REV__nc|ENSG00000167925|Q8N2G8-3|GHDC	REV__nc|ENSG00000167925|Q8N2G8-3|GHDC	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2679443359375	3	413.264164	1236.77066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.554	1	42.619	42.119	43.119	0.065037								0	0	0	0.45132	1	2871	2871		28.081	2.9555	1		+		45247	21438	30355	30368	51183	51183					0.1617482535311865
QLKRQKRDYRI	11	Unmodified	_QLKRQKRDYRI_					0	0	0		chrX:13039916-13040758|49|438.65|0.22|10.95|-|1|FAM9C,FAM9C|1;ENSG00000187268|ENST00000380625|FAM9C	chrX:13039916-13040758|49|438.65|0.22|10.95|-|1|FAM9C,FAM9C|1	chrX:13039916-13040758|49|438.65|0.22|10.95|-|1|FAM9C,FAM9C|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.9682922363281	3	501.967069	1502.87938	0.21344	0.00010714	2.0171	0.0010125	2.2306	0.0011197	501.9680903121297	33.907	0.95065	34.105	33.766	34.717	0.19865					69	22	4	0	0	0	0.74771	1	2480	2480		22.562	0.78116	1	3500100			45248	539	30356	30369	51184	51184					0.14805384585451975
QLKRQKRDYRI	11	Unmodified	_QLKRQKRDYRI_					0	0	0		chrX:13039916-13040758|49|438.65|0.22|10.95|-|1|FAM9C,FAM9C|1;ENSG00000187268|ENST00000380625|FAM9C	chrX:13039916-13040758|49|438.65|0.22|10.95|-|1|FAM9C,FAM9C|1	chrX:13039916-13040758|49|438.65|0.22|10.95|-|1|FAM9C,FAM9C|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.9678649902344	3	501.967069	1502.87938	1.4185	0.00071206	0.73788	0.00037039	2.1564	0.0010824	501.9674555649343	33.874	1.1122	34.179	33.871	34.984	0.30494					80	26	5	0	0	0	0.76892	2	2503	2479;2503		17.833	2.9235	1	4207500			45249	539	30356	30369	51185;51186	51186					0.14805384585451975
QLKRQQLEQLQ	11	Unmodified	_QLKRQQLEQLQ_					0	0	0		nc|ENSG00000151849|Q9HC77-2|CENPJ;ENSG00000151849|ENST00000381884|CENPJ	nc|ENSG00000151849|Q9HC77-2|CENPJ	nc|ENSG00000151849|Q9HC77-2|CENPJ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2716064453125	3	471.272047	1410.79431	0.66427	0.00031305	-0.66793	-0.00031478	-0.0036593	-1.7245E-06	471.2716955726341	19.993	0.83779	19.524	19.113	19.95	-0.46967					50	17	4	0	0	0	0.73621	1	579	579		25.126	3.3456	1	690410			45250	5147	30357	30370	51187	51187					0.10534594328987623
QLKRRNPPP	9	Unmodified	_QLKRRNPPP_					0	0	0			REV__ENSG00000024526|ENST00000456315|DEPDC1	REV__ENSG00000024526|ENST00000456315|DEPDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.3319702148438	2	553.333082	1104.65161	0.28517	0.0001578	-1.4807	-0.00081935	-1.1956	-0.00066155	553.3321125200671	96.704	2.3133	96.935	96.395	98.708	0.23103					137	53	4	0	0	0	0.7932	1	10028	10028		25.45	2.4077	1	3367100	+		45251	16255	30358	30371	51188	51188					0.10347051448275124
QLKRSATPL	9	Unmodified	_QLKRSATPL_					0	0	0			REV__ENST00000474123.1_1_7:105190513-105195680:+|nuORF	REV__ENST00000474123.1_1_7:105190513-105195680:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.30780029296875	2	507.308741	1012.60293	-0.73911	-0.00037496	0.84418	0.00042826	0.10507	5.3304E-05	507.3090651329104	28.358	0.65179	28.261	27.974	28.626	-0.096947					38	15	3	0	0	0	0.67345	1	1733	1733		42.396	1.618	1	309510	+		45252	19202	30359	30372	51189	51189					0.0971313808852301
QLKRSTPQ	8	Unmodified	_QLKRSTPQ_					0	0	0		CON__Q2KJ83	CON__Q2KJ83	CON__Q2KJ83	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.7855529785156	2	479.277441	956.540328	-0.44703	-0.00021425	-0.66862	-0.00032045	-1.1157	-0.00053471	479.2766692969696	92.37	0.29911	92.416	92.326	92.625	0.045448					8	6	2	0	0	0	0.4196	1	9644	9644		23.042	10.083	1	24910		+	45253	613	30360	30373	51190	51190					0.06031992020314192
QLKRWSRLQ	9	Unmodified	_QLKRWSRLQ_					0	0	0			REV__chr12:54282662-54283827|63|1039.33|0.0|26.63|+|1|HNRNPA1,HNRNPA1|1	REV__chr12:54282662-54283827|63|1039.33|0.0|26.63|+|1|HNRNPA1,HNRNPA1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.5527038574219	3	405.575401	1213.70437	0.62785	0.00025464	-4.1778	-0.0016944	-3.55	-0.0014398	405.5746800742	28.825	0.33659	28.652	28.51	28.846	-0.17336					11	7	2	0	0	0	0.20789	1	1801	1801		30.318	7.7381	1	44191	+		45254	15543	30361	30374	51191	51191					0.106070095110681
QLKTVLKREH	10	Unmodified	_QLKTVLKREH_					0	0	0			REV__ENSG00000176046|ENST00000324873|NUPR1	REV__ENSG00000176046|ENST00000324873|NUPR1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3805541992188	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.82	1	114.77	114.27	115.27	-0.05722								0	0	0	0.45132	1	12291	12291		19.104	0	1		+		45255	22102	30362	30375	51192	51192					0.1305614547973164
QLKWWQWWIWW	11	Unmodified	_QLKWWQWWIWW_					0	0	0			REV__chr12:54282841-54283827|63|2521.98|0.0|27.91|+|1|HNRNPA1,HNRNPA1|1	REV__chr12:54282841-54283827|63|2521.98|0.0|27.91|+|1|HNRNPA1,HNRNPA1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26556396484375	4	437.223949	1744.86669	2.8714	0.0012555	2.3187	0.0010138	5.1901	0.0022692	437.2248181864998	25.561	0.63138	25.13	24.851	25.482	-0.4311					16	14	2	0	0	0	0.18304	1	1356	1356		1.4188	0	1	73027	+		45256	15544	30363	30376	51193	51193					0.024049731932109353
QLKWWRWLRRR	11	Unmodified	_QLKWWRWLRRR_					0	0	0			REV__chr12:54283225-54283827|63|356.87|0.0|25.09|+|1|HNRNPA1,HNRNPA1|2	REV__chr12:54283225-54283827|63|356.87|0.0|25.09|+|1|HNRNPA1,HNRNPA1|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.336181640625	3	561.998815	1682.97462	1.1536	0.00064829	2.1087	0.0011851	3.2623	0.0018334	562.0000335120397	19.842	0.65623	19.372	19.065	19.722	-0.46967					33	13	4	0	0	0	0.93574	1	586	586		0.3405	0.3405	1	100710	+		45257	15546	30364	30377	51194	51194					0.16044782567132643
QLKWWRWLRRR	11	Unmodified	_QLKWWRWLRRR_					0	0	0			REV__chr12:54283225-54283827|63|356.87|0.0|25.09|+|1|HNRNPA1,HNRNPA1|2	REV__chr12:54283225-54283827|63|356.87|0.0|25.09|+|1|HNRNPA1,HNRNPA1|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.33642578125	3	561.998815	1682.97462	0.37699	0.00021187	2.9926	0.0016819	3.3696	0.0018937	562.3349064448382	19.976	0.64424	19.346	19.028	19.673	-0.62961					29	13	3	0	0	0	0.89215	1	606	606		3.2113	1.8894	1	155070	+		45258	15546	30364	30377	51195	51195					0.16044782567132643
QLKYLDKS	8	Unmodified	_QLKYLDKS_					0	0	0			REV__ENSG00000117501|ENST00000367759|MROH9	REV__ENSG00000117501|ENST00000367759|MROH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.78125	2	497.782025	993.549496	-1.2254	-0.00061	1.0485	0.00052192	-0.17695	-8.8084E-05	497.78240868647987	38.786	0.92824	39.128	38.817	39.745	0.34187					38	21	2	0	0	0	0.64455	1	3213	3213		69.628	3.1983	1	519540	+		45259	18265	30365	30378	51196	51196					0.05246340585995313
QLLFPCQP	8	Unmodified	_QLLFPCQP_					0	0	0			REV__ENST00000332995.11_1_6:13288134-13288596:+|nuORF	REV__ENST00000332995.11_1_6:13288134-13288596:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.2491760253906	2	473.246763	944.478974	-0.51455	-0.00024351	3.1885	0.0015089	2.6739	0.0012654	473.24818540235697	28.981	1.8023	28.961	28.523	30.325	-0.019407					101	54	4	0	0	0	0.93529	1	1489	1489		52.299	2.2746	1	574970	+		45260	25144	30366	30379	51197	51197					0.0045134399667858816
QLLGELLHRA	10	Unmodified	_QLLGELLHRA_					0	0	0			REV__ENST00000367855.7_1_6:134492115-134495951:-|nuORF	REV__ENST00000367855.7_1_6:134492115-134495951:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3403930664062	2	575.340572	1148.66659	-0.95443	-0.00054912	1.0023	0.00057665	0.047846	2.7528E-05	575.3409602555264	38.845	0.98347	38.797	38.42	39.404	-0.047005					49	22	3	0	0	0	0.67571	1	2764	2764		45.972	0	1	284350	+		45261	18319	30367	30380	51198	51198					0.09820498525618859
QLLGKETLY	9	Unmodified	_QLLGKETLY_					0	0	0			REV__ENSG00000163312|ENST00000295488|HELQ	REV__ENSG00000163312|ENST00000295488|HELQ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.7836303710938	2	532.802957	1063.59136	0.27267	0.00014528	-0.2838	-0.00015121	-0.011128	-5.9289E-06	532.8027462346423	78.796	0.55241	79.206	78.929	79.482	0.4106					27	12	3	0	0	0	0.20789	1	9002	9002		39.253	7.723	1	286640	+		45262	20896	30368	30381	51199	51199					0.062108962745242025
QLLGQQRHRF	10	Unmodified	_QLLGQQRHRF_					0	0	0			REV__ENST00000529132.1_1_11:67173299-67173527:+|nuORF	REV__ENST00000529132.1_1_11:67173299-67173527:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3614501953125	2	641.859995	1281.70544	-0.048782	-3.1311E-05	-1.3065	-0.00083859	-1.3553	-0.0008699	642.3608077145252	117.28	0.25537	117.21	117	117.26	-0.07531					22	8	4	0	0	0	0.46422	1	12587	12587		58.782	7.5893	1	1765100	+		45263	28261	30369	30382	51200	51200					0.0758522387998255
QLLIVRPVRSD	11	Unmodified	_QLLIVRPVRSD_					0	0	0		ENSG00000186806|ENST00000335624|VSIG10L;nc|ENSG00000186806|Q86VR7-2|VSIG10L	ENSG00000186806|ENST00000335624|VSIG10L	ENSG00000186806|ENST00000335624|VSIG10L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3956298828125	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.77421	1	12631	12631		16.717	1.8525	1	2297700			45264	7820	30370	30383	51201	51201					0.13652414651210165
QLLIWIPRL	9	Unmodified	_QLLIWIPRL_					0	0	0		ENSG00000069943|ENST00000164305|PIGB	ENSG00000069943|ENST00000164305|PIGB	ENSG00000069943|ENST00000164305|PIGB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3693237304688	2	576.368601	1150.72265	-0.0032095	-1.8498E-06	1.1259	0.00064892	1.1227	0.00064707	576.3691255987982	49.503	2.0721	49.41	48.483	50.555	-0.093182					130	52	3	0	0	0	0.7932	1	3849	3849		17.365	0.89182	1	379010			45265	1226	30371	30384	51202	51202					0.15331751433086538
QLLKEPDLSD	10	Unmodified	_QLLKEPDLSD_					0	0	0			REV__ENST00000546739.5_1_12:54858841-54867375:-|nuORF	REV__ENST00000546739.5_1_12:54858841-54867375:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	578.3209228515625	2	579.306061	1156.59757	0.80363	0.00046555	2.0071	0.0011627	2.8107	0.0016283	579.3065155546589	92.246	1.2612	92.405	91.899	93.16	0.15875					47	29	2	0	0	0	0.37624	1	9353	9353		29.17	18.305	1	75265	+		45266	21677	30372	30385	51203	51203					0.02553369715383269
QLLKQRLHQ	9	Unmodified	_QLLKQRLHQ_					0	0	0			REV__ENSG00000164125|ENST00000585682|GASK1B	REV__ENSG00000164125|ENST00000585682|GASK1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.35400390625	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.7932	1	12550	12550		23.042	0.46283	1	3937500	+		45267	21037	30373	30386	51204	51204					0.11863607136797327
QLLLEFGAVTG	11	Unmodified	_QLLLEFGAVTG_					0	0	0			REV__nc|ENSG00000007237|O60861-2|GAS7	REV__nc|ENSG00000007237|O60861-2|GAS7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.319580078125	2	574.321514	1146.62847	-0.44784	-0.0002572	-2.9941	-0.0017196	-3.4419	-0.0019768	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.69995	1	9460	9460		31.53	1.2121	1	1099700	+		45268	16120	30374	30387	51205	51205					0.06102567820266813
QLLLERQSL	9	Unmodified	_QLLLERQSL_					0	0	0		ENST00000497459.1_1_1:243651151-243663084:+|nuORF;nc|ENSG00000054282|Q86SQ7-3|SDCCAG8;nc|ENSG00000054282|Q86SQ7-4|SDCCAG8;ENSG00000054282|ENST00000366541|SDCCAG8	ENST00000497459.1_1_1:243651151-243663084:+|nuORF	ENST00000497459.1_1_1:243651151-243663084:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.3269653320312	2	550.327131	1098.63971	3.1879	0.0017544	-3.0241	-0.0016642	0.16384	9.0164E-05	550.325464553472	100.2	1.1012	100.15	99.651	100.75	-0.052353					65	24	3	0	0	0	0.48102	1	10896	10896		52.937	8.5595	1	374270			45269	1018	30375	30388	51206	51206					0.09433389914420331
QLLLERQSL	9	Unmodified	_QLLLERQSL_					0	0	0		ENST00000497459.1_1_1:243651151-243663084:+|nuORF;nc|ENSG00000054282|Q86SQ7-3|SDCCAG8;nc|ENSG00000054282|Q86SQ7-4|SDCCAG8;ENSG00000054282|ENST00000366541|SDCCAG8	ENST00000497459.1_1_1:243651151-243663084:+|nuORF	ENST00000497459.1_1_1:243651151-243663084:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	550.327131	1098.63971	0.85084	0.00046824	-0.66203	-0.00036433	0.18881	0.00010391	550.3267172362815	99.651	1.1113	99.984	99.61	100.72	0.33295	-0.22673	-0.00013092	NaN	52.937	50	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	246370			45270	1018	30375	30388							0.09433389914420331
QLLLERQSL	9	Unmodified	_QLLLERQSL_					0	0	0		ENST00000497459.1_1_1:243651151-243663084:+|nuORF;nc|ENSG00000054282|Q86SQ7-3|SDCCAG8;nc|ENSG00000054282|Q86SQ7-4|SDCCAG8;ENSG00000054282|ENST00000366541|SDCCAG8	ENST00000497459.1_1_1:243651151-243663084:+|nuORF	ENST00000497459.1_1_1:243651151-243663084:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	550.327131	1098.63971	1.8755	0.0010321	-1.709	-0.0009405	0.16648	9.1618E-05	550.3261497274533	99.889	1.1989	100.25	99.676	100.87	0.36292	0.041236	-0.0012832	NaN	52.937	50	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	297510			45271	1018	30375	30388							0.09433389914420331
QLLLIRLN	8	Unmodified	_QLLLIRLN_					0	0	0			REV__ENST00000337743.8_1_20:13567977-13605857:-|nuORF	REV__ENST00000337743.8_1_20:13567977-13605857:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7948303222656	2	491.824027	981.633501	-0.63787	-0.00031372	-4.4488	-0.002188	-5.0867	-0.0025018	491.8197943202968	50.812	0.34993	50.788	50.64	50.99	-0.02343					25	14	2	0	0	0	0.4196	1	4403	4403		19.36	1.995	1	34744	+		45272	25207	30376	30389	51207	51207					0.1419491647355926
QLLLLKKK	8	Unmodified	_QLLLLKKK_					0	0	0			REV__ENSG00000198929|ENST00000361897|NOS1AP	REV__ENSG00000198929|ENST00000361897|NOS1AP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7215270996094	2	492.35242	982.690287	-0.059228	-2.9161E-05	-1.1246	-0.0005537	-1.1838	-0.00058286	492.3517461160117	19.488	2.7858	18.859	17.975	20.761	-0.62961					72	64	2	0	0	0	0.4196	1	689	689		7.6903	0	1	45645	+		45273	23419	30377	30390	51208	51208					0.19824964030078718
QLLLLVSP	8	Unmodified	_QLLLLVSP_					0	0	0			REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78790283203125	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.84341	3	2766	2766;2778;2822		40.573	7.057	1	15753000	+		45274	27857	30378	30391	51209;51210;51211	51209					0.11308733942325944
QLLLLVSP	8	Unmodified	_QLLLLVSP_					0	0	0			REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879943847656	2	441.786579	881.558604	-0.46415	-0.00020506	3.4194	0.0015106	2.9552	0.0013056	441.78799213186835	39.191	2.395	39.203	38.447	40.842	0.011173					219	57	6	0	0	0	0.90465	2	2765	2765;2777		40.573	7.057	1	14534000	+		45275	27857	30378	30391	51212;51213	51212					0.11308733942325944
QLLLLVSP	8	Unmodified	_QLLLLVSP_					0	0	0			REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7879638671875	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.80706	2	2374	2374;2412		40.573	0	1	11532000	+		45276	27857	30378	30391	51214;51215	51214					0.11308733942325944
QLLLLVSP	8	Unmodified	_QLLLLVSP_					0	0	0			REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7880859375	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.87922	2	2466	2441;2466		33.516	5.1588	1	12467000	+		45277	27857	30378	30391	51216;51217	51217					0.11308733942325944
QLLLLVSP	8	Unmodified	_QLLLLVSP_					0	0	0			REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.78802490234375	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.87922	1	3127	3127		31.955	5.1588	1	54520000	+		45278	27857	30378	30391	51218	51218					0.11308733942325944
QLLLLVSP	8	Unmodified	_QLLLLVSP_					0	0	0			REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	REV__ENST00000504376.6_1_5:22505402-22853218:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.78814697265625	2	441.786579	881.558604	-1.1834	-0.00052282	2.9635	0.0013093	1.7801	0.00078643	441.78771241232647	40.14	0.99562	40.729	39.913	40.908	0.58915					63	23	3	0	0	0	0.884	1	3363	3363		33.516	0	1	2890500	+		45279	27857	30378	30391	51219	51219					0.11308733942325944
QLLLRRLRGP	10	Unmodified	_QLLLRRLRGP_					0	0	0			REV__ENST00000300134.7_1_12:57501484-57501966:-|nuORF	REV__ENST00000300134.7_1_12:57501484-57501966:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	407.9311828613281	3	407.934929	1220.78296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.3	1	115.39	114.89	115.89	0.094063								0	0	0	0.45132	1	12302	12302		11.636	0	1		+		45280	24746	30379	30392	51220	51220					0.1813986181614382
QLLLTPVV	8	Unmodified	_QLLLTPVV_					0	0	0			REV__nc|ENSG00000243649|P00751-2|CFB	REV__nc|ENSG00000243649|P00751-2|CFB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7880554199219	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.86791	1	2377	2377		28.254	0	1	12467000	+		45281	30232	30380	30393	51221	51221					0.11308733942325944
QLLPKNVQGT	10	Unmodified	_QLLPKNVQGT_					0	0	0		ENSG00000188649|ENST00000646931|CC2D2B;nc|ENSG00000188649|Q6DHV5-1|CC2D2B;nc|ENSG00000188649|Q6DHV5-2|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.3179321289062	2	549.319306	1096.62406	-0.54475	-0.00029924	-2.4274	-0.0013334	-2.9721	-0.0016327	549.3179138519522	101.15	1.9875	101.19	100.7	102.69	0.031036					127	47	4	0	0	0	0.86698	1	10785	10785		28.081	3.5623	1	2171100			45282	7945	30381	30394	51222	51222					0.0796110339738334
QLLPRLLWVLW	11	Unmodified	_QLLPRLLWVLW_					0	0	0		ENST00000292431.4_1_19:13250289-13250439:+|nuORF	ENST00000292431.4_1_19:13250289-13250439:+|nuORF	ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.31353759765625	3	479.630735	1435.87038	1.2446	0.00059696	3.8265	0.0018353	5.0711	0.0024323	479.6318335107323	19.602	1.526	19.132	18.609	20.135	-0.46967					74	32	3	0	0	0	0.18066	1	625	625		9.6461	0	1	106770			45283	9686	30382	30395	51223	51223					0.16987642967069405
QLLPTTGI	8	Unmodified	_QLLPTTGI_					0	0	0			REV__ENST00000480022.1_1_20:40043429-40043612:-|nuORF	REV__ENST00000480022.1_1_20:40043429-40043612:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.75115966796875	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.92457	1	7655	7655		47.916	1.9636	1	579450	+		45284	27409	30383	30396	51224	51224					0.06383284011508294
QLLQGLNLLRQ	11	Unmodified	_QLLQGLNLLRQ_					0	0	0		ENSG00000179454|ENST00000396128|KLHL28;nc|ENSG00000179454|Q9NXS3-2|KLHL28	ENSG00000179454|ENST00000396128|KLHL28	ENSG00000179454|ENST00000396128|KLHL28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3931274414062	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.76322	1	12880	12880		19.104	1.6355	1	2297700			45285	7270	30384	30397	51225	51225					0.13652414651210165
QLLQSVAEHAL	11	Unmodified	_QLLQSVAEHAL_					0	0	0			REV__ENSG00000100034|ENST00000263212|PPM1F	REV__ENSG00000100034|ENST00000263212|PPM1F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.5601806640625	3	403.559305	1207.65609	0.70065	0.00028275	1.0269	0.00041442	1.7276	0.00069717	403.5596050855879	22.48	0.98659	22.545	22.232	23.218	0.064745					76	37	3	0	0	0	0.71803	1	704	704		28.577	0.49524	1	100540	+		45286	17129	30385	30398	51226	51226					0.060564710805238064
QLLQYVVST	9	Unmodified	_QLLQYVVST_					0	0	0			REV__ENSG00000181626|ENST00000587848|ANKRD62	REV__ENSG00000181626|ENST00000587848|ANKRD62	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3613891601562	2	525.795132	1049.57571	1.3822	0.00072674	-0.98164	-0.00051614	0.40054	0.0002106	525.7943190498987	34.468	0.37209	34.773	34.571	34.943	0.30495					19	8	4	0	0	0	0.20789	1	2582	2582		32.812	0	1	243050	+		45287	22468	30386	30399	51227	51227					0.052906097574805244
QLLRCVAR	8	Unmodified	_QLLRCVAR_					0	0	0			REV__ENST00000597778.5_1_19:47996282-47999001:-|nuORF	REV__ENST00000597778.5_1_19:47996282-47999001:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.7873840332031	2	479.784379	957.554204	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.924	1	37.866	37.366	38.366	-0.057915								0	0	0	0.29452	1	2205	2205		33.516	0	1		+		45288	29272	30387	30400	51228	51228					0.07372946247767231
QLLRDLSGLQ	10	Unmodified	_QLLRDLSGLQ_					0	0	0		ENSG00000115020|ENST00000264380|PIKFYVE	ENSG00000115020|ENST00000264380|PIKFYVE	ENSG00000115020|ENST00000264380|PIKFYVE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.8311767578125	2	571.830037	1141.64552	0.65309	0.00037346	2.9568	0.0016908	3.6099	0.0020642	571.831622562202	76.36	0.70596	76.493	76.172	76.878	0.13325					61	24	4	0	0	0	0.51401	1	7127	7127		54.722	5.1863	1	512960			45289	2807	30388	30401	51229	51229					0.08036488426091637
QLLRHFTHP	9	Unmodified	_QLLRHFTHP_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.7919921875	2	574.819807	1147.62506	0.53252	0.0003061	-0.33053	-0.00018999	0.20199	0.00011611	575.3197065482307	80.693	0.21597	80.633	80.494	80.71	-0.059692					5	4	2	0	0	0	0.20789	1	8117	8117		29.15	13.508	1	38094	+		45290	16090	30389	30402	51230	51230					0.05715362556929904
QLLTGVPD	8	Unmodified	_QLLTGVPD_					0	0	0			REV__ENSG00000172939|ENST00000311806|OXSR1	REV__ENSG00000172939|ENST00000311806|OXSR1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.7381896972656	2	421.734543	841.454533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.788	1	31.899	31.399	32.399	0.11117								0	0	0	0.29978	1	1471	1471		21.96	1.4781	1		+		45291	21869	30390	30403	51231	51231					0.027464071148074254
QLLTWKKG	8	Unmodified	_QLLTWKKG_					0	0	0			REV__ENSG00000184985|ENST00000507866|SORCS2	REV__ENSG00000184985|ENST00000507866|SORCS2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.29241943359375	2	487.295102	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.363	1	31.475	30.975	31.975	0.11198								0	0	0	0.30811	1	1432	1432		45.952	0	1		+		45292	22720	30391	30404	51232	51232					0.0882665454812468
QLMVRGGP	8	Unmodified	_QLMVRGGP_					0	0	0		nc|ENSG00000185684|Q6ZTU2|EP400P1;nc|ENSG00000185684|Q6ZTU2-6|EP400P1	nc|ENSG00000185684|Q6ZTU2|EP400P1	nc|ENSG00000185684|Q6ZTU2|EP400P1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.2355041503906	2	429.23673	856.458907	0.92962	0.00039903	-3.3729	-0.0014478	-2.4433	-0.0010487	429.2351427168519	63.189	2.3191	63.218	62.635	64.954	0.028133					251	82	4	0	0	0	0.86288	1	5953	5953		26.796	0	1	5799800			45293	15154	30392	30405	51233	51233					0.024935930567380638
QLNIIPPET	9	Unmodified	_QLNIIPPET_					0	0	0			REV__ENSG00000184459|ENST00000300399|BPIFC	REV__ENSG00000184459|ENST00000300399|BPIFC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.80224609375	2	512.787307	1023.56006	1.368	0.0007015	-1.752	-0.00089842	-0.38402	-0.00019692	512.7862946925073	28.292	0.6865	28.119	27.713	28.399	-0.17336					37	16	3	0	0	0	0.55097	1	1688	1688		49.442	3.4896	1	224460	+		45294	22680	30393	30406	51234	51234					0.04922323240418791
QLNKELKVVK	10	Unmodified	_QLNKELKVVK_					0	0	0			REV__ENSG00000185697|ENST00000522677|MYBL1	REV__ENSG00000185697|ENST00000522677|MYBL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2393493652344	3	400.255446	1197.74451	1.98	0.00079249	-4.4142	-0.0017668	-2.4342	-0.00097431	400.5880870919862	19.486	0.51221	19.017	18.79	19.303	-0.46967					12	10	2	0	0	0	0.37624	1	512	512		10.104	0	1	28035	+		45295	22785	30394	30407	51235	51235					0.1535451139095585
QLNQAGLVPPG	11	Unmodified	_QLNQAGLVPPG_					0	0	0		ENSG00000204978|ENST00000378187|ERICH4	ENSG00000204978|ENST00000378187|ERICH4	ENSG00000204978|ENST00000378187|ERICH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	547.3035888671875	2	547.303655	1092.59276	-0.2532	-0.00013858	-0.82953	-0.00045401	-1.0827	-0.00059259	547.3027595738097	32.81	0.25808	32.821	32.691	32.949	0.010899					9	5	2	0	0	0	0.68378	1	1866	1866		34.173	11.13	1	19078			45296	8505	30395	30408	51236	51236					0.05016530363241145
QLNQAGLVPPG	11	Unmodified	_QLNQAGLVPPG_					0	0	0		ENSG00000204978|ENST00000378187|ERICH4	ENSG00000204978|ENST00000378187|ERICH4	ENSG00000204978|ENST00000378187|ERICH4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	547.303655	1092.59276	0.39384	0.00021555	-0.97243	-0.00053222	-0.57859	-0.00031667	547.303100388912	33.044	0.30517	32.989	32.81	33.115	-0.05434	0.13176	-0.00011975	NaN	34.173	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29569			45297	8505	30395	30408							0.05016530363241145
QLNQAGLVPPG	11	Unmodified	_QLNQAGLVPPG_					0	0	0		ENSG00000204978|ENST00000378187|ERICH4	ENSG00000204978|ENST00000378187|ERICH4	ENSG00000204978|ENST00000378187|ERICH4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	547.303655	1092.59276	0.1795	9.8241E-05	-0.65359	-0.00035771	-0.47409	-0.00025947	548.3056625713516	32.764	0.58077	32.763	32.399	32.979	-0.0016365	-0.094759	0.00022925	NaN	34.173	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	187610			45298	8505	30395	30408							0.05016530363241145
QLNRFAGF	8	Unmodified	_QLNRFAGF_					0	0	0		ENST00000508781.5_1_5:110073914-110092698:+|nuORF;nc|ENSG00000164209|Q96AG3-3|SLC25A46;ENSG00000164209|ENST00000355943|SLC25A46	ENST00000508781.5_1_5:110073914-110092698:+|nuORF	ENST00000508781.5_1_5:110073914-110092698:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.2601623535156	2	476.753601	951.49265	-1.0827	-0.00051616	-0.61429	-0.00029287	-1.697	-0.00080903	476.7535286633335	75.697	0.48878	76.264	76.066	76.555	0.56628					19	11	2	0	0	0	0.4196	1	8586	8586		13.775	1.5685	1	221150			45299	5939	30396	30409	51237	51237					0.014963378201287014
QLNRPQRT	8	Unmodified	_QLNRPQRT_					0	0	0			REV__ENSG00000183475|ENST00000332783|ASB7	REV__ENSG00000183475|ENST00000332783|ASB7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.8000183105469	2	506.785964	1011.55738	0.063579	3.2221E-05	2.6497	0.0013428	2.7133	0.0013751	506.7871512959727	26.004	0.13086	25.747	25.638	25.769	-0.2572					4	2	2	0	0	0	0.4196	1	1381	1381		44.117	12.162	1	20222	+		45300	22608	30397	30410	51238	51238					0.052059126261383426
QLNRPVHHTLV	11	Unmodified	_QLNRPVHHTLV_					0	0	0			REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.585693359375	3	438.586077	1312.7364	-1.997	-0.00087587	1.0676	0.00046821	-0.92947	-0.00040765	438.58651601334884	31.993	0.97123	31.993	31.701	32.672	0					74	39	2	0	0	0	0.74022	1	1589	1589		24.232	0	1	798930	+		45301	29779	30398	30411	51239	51239					0.09254377194224617
QLNRVLGPPR	10	Unmodified	_QLNRVLGPPR_					0	0	0			REV__nc|ENSG00000163395|Q86VF2|IGFN1	REV__nc|ENSG00000163395|Q86VF2|IGFN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3450927734375	2	575.346189	1148.67783	2.6142	0.0015041	-3.4926	-0.0020094	-0.87835	-0.00050535	575.3441275619858	98.676	2.5508	98.621	98.113	100.66	-0.054825					162	58	5	0	0	0	0.8651	1	10741	10741		25.574	3.6142	1	4409300	+		45302	20911	30399	30412	51240	51240					0.10943320619730912
QLPAMKKPL	9	Unmodified	_QLPAMKKPL_					0	0	0			REV__nc|ENSG00000105479|Q96M63-5|ODAD1	REV__nc|ENSG00000105479|Q96M63-5|ODAD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.8106079101562	2	513.312438	1024.61032	1.5676	0.00080469	0.26241	0.0001347	1.83	0.00093938	513.3126306855	27.749	1.1784	27.494	26.945	28.123	-0.25465					37	27	2	0	0	0	0.20789	1	1669	1669		60.972	0	1	151580	+		45303	17543	30400	30413	51241	51241					0.099001543645727
QLPAVHPIFK	10	Unmodified	_QLPAVHPIFK_					0	0	0		nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-3|ALOX5;ENSG00000012779|ENST00000374391|ALOX5;ENST00000475300.1_1_10:45935943-45936950:+|nuORF;nc|ENSG00000012779|P09917-5|ALOX5;nc|ENSG00000012779|P09917-4|ALOX5	nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-4|ALOX5	nc|ENSG00000012779|P09917-4|ALOX5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.3455810546875	2	575.342584	1148.67061	0.97572	0.00056137	4.3533	0.0025046	5.329	0.003066	575.3449806461122	98.555	2.3295	98.603	98.055	100.38	0.048157					165	53	5	0	0	0	0.86718	1	10522	10522		27.882	2.3082	1	4316200			45304	803;14739	30401	30414	51242	51242					0.10222588019314571
QLPESMRL	8	Oxidation (M)	_QLPESM(Oxidation (M))RL_		QLPESM(1)RL		QLPESM(50)RL	0	0	1			REV__ENSG00000176953|ENST00000320805|NFATC2IP	REV__ENSG00000176953|ENST00000320805|NFATC2IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.25885009765625	2	495.257859	988.501166	-1.7096	-0.00084669	4.0161	0.001989	2.3065	0.0011423	495.25992726495855	40.741	2.1466	41.33	40.797	42.943	0.58915					138	58	4	0	0	0	0.92973	1	3484	3484		50.025	7.6284	1	7011700	+		45305	22164	30402	30415	51243	51243					0.006455236744500326
QLPKVLGL	8	Unmodified	_QLPKVLGL_					0	0	0		chr2:42187327-42245505|34|14.53|0.32|5.53|+|1|TE_info:AluJo,AluJo_dup7891,Alu,SINE,donor,-,42187062,42187327|None,EML4|4	chr2:42187327-42245505|34|14.53|0.32|5.53|+|1|TE_info:AluJo,AluJo_dup7891,Alu,SINE,donor,-,42187062,42187327|None,EML4|4	chr2:42187327-42245505|34|14.53|0.32|5.53|+|1|TE_info:AluJo,AluJo_dup7891,Alu,SINE,donor,-,42187062,42187327|None,EML4|4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77862548828125	2	434.286746	866.558939	-2.1307	-0.00092532	3.8796	0.0016848	1.7489	0.00075953	434.28851956309404	40.56	0.36939	40.952	40.832	41.202	0.39209					15	10	2	0	0	0	0.4196	1	3507	3507		19.36	5.5846	1	472020			45306	334	30403	30416	51244	51244					0.12032153662175915
QLPLFPVVA	9	Unmodified	_QLPLFPVVA_					0	0	0			REV__ENST00000496460.5_1_9:130494315-130497584:-|nuORF	REV__ENST00000496460.5_1_9:130494315-130497584:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.796142578125	2	492.299853	982.585153	-1.5089	-0.00074281	-3.4086	-0.0016781	-4.9175	-0.0024209	492.2981004595933	51.503	1.6283	51.503	50.881	52.509	0					77	42	2	0	0	0	0.20789	1	4136	4136		40.573	13.777	1	119410	+		45307	27751	30404	30417	51245	51245					0.09316422833660454
QLPLLFKVVLH	11	Unmodified	_QLPLLFKVVLH_					0	0	0		nc|ENSG00000148200|Q15406-3|NR6A1;nc|ENSG00000148200|Q15406-5|NR6A1;nc|ENSG00000148200|Q15406-2|NR6A1;nc|ENSG00000148200|Q15406-4|NR6A1;ENSG00000148200|ENST00000487099|NR6A1	nc|ENSG00000148200|Q15406-3|NR6A1	nc|ENSG00000148200|Q15406-3|NR6A1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.30010986328125	3	436.279703	1305.81728	-0.43155	-0.00018827	4.1936	0.0018296	3.762	0.0016413	436.28117597273854	74.703	0.11546	74.66	74.599	74.715	-0.043877					5	3	2	0	0	0	0.17911	1	7333	7333		13.508	5.7034	1	15528			45308	4937	30405	30418	51246	51246					0.17660265184417767
QLPLLSPAPL	10	Unmodified	_QLPLLSPAPL_					0	0	0			REV__ENST00000495270.1_1_9:130697852-130697987:-|nuORF	REV__ENST00000495270.1_1_9:130697852-130697987:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8273315429688	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.86589	1	10956	10956		29.15	2.4566	1	30867000	+		45309	27734	30406	30419	51247	51247					0.11092077033845271
QLPMEPDFE	9	Unmodified	_QLPMEPDFE_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.9203491210938	2	553.247157	1104.47976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.142	1	67.142	66.642	67.642	0								0	0	0	0.30778	1	5933	5933		27.882	4.3595	1		+		45310	16117	30407	30420	51248	51248					-0.06829906144935194
QLPQYQNN	8	Unmodified	_QLPQYQNN_					0	0	0			REV__L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|26|1|sense	REV__L1PA6_dup5203|chr15:42246296-42252380:-|1.0307181180962524|0.1958308077281479|2.4|63.0|26|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.2637023925781	2	502.743431	1003.47231	1.3444	0.00067591	2.5331	0.0012735	3.8776	0.0019494	502.7443240456963	33.171	0.42133	33.382	33.061	33.482	0.21168					15	9	2	0	0	0	0.4196	1	2343	2343		68.485	0	1	82410	+		45311	29581	30408	30421	51249	51249					-0.02928877630347415
QLPRELQTKL	10	Unmodified	_QLPRELQTKL_					0	0	0			REV__ENST00000509525.5_1_5:132534789-132560973:-|nuORF	REV__ENST00000509525.5_1_5:132534789-132560973:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2477111816406	3	409.24695	1224.71902	1.024	0.00041908	4.0338	0.0016508	5.0578	0.0020699	409.2485717697956	27.976	0.9158	27.721	27.368	28.284	-0.25465					42	21	3	0	0	0	0.78666	1	1670	1670		40.058	1.3046	1	127400	+		45312	27940	30409	30422	51250	51250					0.11565036868546485
QLPRRLAQWD	10	Unmodified	_QLPRRLAQWD_					0	0	0			REV__ENST00000488906.1_1_17:45236559-45237015:-|nuORF	REV__ENST00000488906.1_1_17:45236559-45237015:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.85888671875	2	641.854378	1281.6942	7.1265	0.0045742	0.9889	0.00063473	8.1154	0.0052089	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.85251	1	13792	13792		19.997	0	1	98705	+		45313	27607	30410	30423	51251	51251					0.0646240178584776
QLPRVRAVS	9	Unmodified	_QLPRVRAVS_					0	0	0			REV__nc|ENSG00000130518|Q9H0B3-3|IQCN	REV__nc|ENSG00000130518|Q9H0B3-3|IQCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3165893554688	2	513.314358	1024.61416	0.017852	9.1639E-06	4.224	0.0021683	4.2419	0.0021774	513.3163616040292	43.268	1.3862	43.218	42.749	44.135	-0.050312					74	33	3	0	0	0	0.76764	1	3011	3011		34.173	0.65696	1	383900	+		45314	29301	30411	30424	51252	51252					0.10283960182641749
QLPTGGRCC	9	Unmodified	_QLPTGGRCC_					0	0	0		ENST00000491252.5_1_2:74710449-74717828:+|nuORF;ENST00000449459.5_1_2:74710449-74718064:+|nuORF	ENST00000491252.5_1_2:74710449-74717828:+|nuORF	ENST00000491252.5_1_2:74710449-74717828:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.7144470214844	2	467.715304	933.416056	-1.1651	-0.00054494	1.784	0.00083439	0.61886	0.00028945	467.71593243095464	72.382	0.63271	72.462	72.095	72.728	0.080032					44	21	3	0	0	0	0.7932	1	6572	6572		24.203	2.2429	1	143690			45315	11874	30412	30425	51253	51253					-0.05331545063006615
QLPVFKHK	8	Unmodified	_QLPVFKHK_					0	0	0		ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000495197.1_1_10:38368986-38369799:-|nuORF	ENST00000495197.1_1_10:38368986-38369799:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.8036193847656	2	498.803094	995.591636	0.57569	0.00028715	0.65338	0.00032591	1.2291	0.00061306	498.80326110747177	49.369	1.5492	50.214	49.828	51.377	0.84501					106	37	4	0	0	0	0.85277	1	4837	4837		25.45	0	1	6182600			45316	12763	30413	30426	51254	51254					0.09366360785031702
QLQAEVKKRKH	11	Unmodified	_QLQAEVKKRKH_					0	0	0			REV__ENSG00000100345|ENST00000216181|MYH9	REV__ENSG00000100345|ENST00000216181|MYH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6087341308594	3	455.608882	1363.80482	-0.20528	-9.3526E-05	-0.84962	-0.00038709	-1.0549	-0.00048062	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.67041	2	7651	7651;7663		36.318	5.7488	1	1835000	+		45317	17175	30414	30427	51255;51256	51255					0.13746621774066625
QLQEAETRGV	10	Unmodified	_QLQEAETRGV_					0	0	0		ENST00000539719.5_1_1:33765092-33765314:+|nuORF	ENST00000539719.5_1_1:33765092-33765314:+|nuORF	ENST00000539719.5_1_1:33765092-33765314:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.7943725585938	2	565.793652	1129.57275	0.55994	0.00031681	3.5224	0.001993	4.0824	0.0023098	565.7956122725219	67.048	0.93106	67.599	67.315	68.246	0.55071					51	25	3	0	0	0	0.78666	1	7347	7347		40.058	2.2467	1	1292700			45318	13484	30415	30428	51257	51257					0.013147346326604747
QLQETVATSF	10	Unmodified	_QLQETVATSF_					0	0	0			REV__ENSG00000068878|ENST00000404125|PSME4	REV__ENSG00000068878|ENST00000404125|PSME4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.2874755859375	2	562.285128	1122.5557	0.51987	0.00029231	2.0868	0.0011734	2.6067	0.0014657	562.2860653495065	63.228	0.96156	63.782	63.382	64.343	0.5545					53	22	3	0	0	0	0.86471	1	6812	6812		30.318	2.2362	1	538600	+		45319	16568	30416	30429	51258	51258					-0.0006718597314829822
QLQGLLVHL	9	Unmodified	_QLQGLLVHL_					0	0	0		ENSG00000179698|ENST00000323662|WDR97	ENSG00000179698|ENST00000323662|WDR97	ENSG00000179698|ENST00000323662|WDR97	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.81396484375	2	510.813659	1019.61277	-1.3545	-0.00069191	-0.18038	-9.2141E-05	-1.5349	-0.00078405	510.81327613613934	81.563	0.81853	81.678	81.319	82.137	0.11426					32	18	2	0	0	0	0.7932	1	7779	7779		26.796	3.7536	1	210970			45320	7288	30417	30430	51259	51259					0.10374326093892705
QLQIITGLLAF	11	Unmodified	_QLQIITGLLAF_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.5841979980469	3	406.24818	1215.72271	5.5965	0.0022736	-2.4525	-0.00099631	3.144	0.0012773	406.581695337414	111.5	0.49822	111.55	111.24	111.74	0.049095					37	18	3	0	0	0	0.74405	1	13541	13541		23.378	4.1152	1	805300	+		45321	18069	30418	30431	51260	51260					0.12347706642412959
QLQKDESQL	9	Unmodified	_QLQKDESQL_					0	0	0			REV__ENSG00000236287|ENST00000413761|ZBED5	REV__ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.7820434570312	2	544.782753	1087.55095	0.11733	6.3919E-05	-0.23536	-0.00012822	-0.11803	-6.4303E-05	544.7825039051146	20.465	0.50221	20.006	19.778	20.28	-0.4591					21	10	4	0	0	0	0.69624	1	655	655		40.778	0.20554	1	85609	+		45322	23788	30419	30432	51261	51261					0.010679298841068885
QLQKDESQL	9	Unmodified	_QLQKDESQL_					0	0	0			REV__ENSG00000236287|ENST00000413761|ZBED5	REV__ENSG00000236287|ENST00000413761|ZBED5	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	544.782753	1087.55095	0.11733	6.3919E-05	-0.23536	-0.00012822	-0.11803	-6.4303E-05	544.7825039051146	20.465	0.50221	20.006	19.778	20.28	-0.4591	-0.015077	-6.1392E-05	NaN	40.778	21	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85609	+		45323	23788	30419	30432							0.010679298841068885
QLQKDESQL	9	Unmodified	_QLQKDESQL_					0	0	0			REV__ENSG00000236287|ENST00000413761|ZBED5	REV__ENSG00000236287|ENST00000413761|ZBED5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	544.782753	1087.55095	-0.20462	-0.00011147	-0.14417	-7.8543E-05	-0.34879	-0.00019001	544.7826977313063	20.666	0.52882	20.036	19.809	20.338	-0.6296	0.015077	3.7966E-05	NaN	40.778	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101500	+		45324	23788	30419	30432							0.010679298841068885
QLQKITSQI	9	Unmodified	_QLQKITSQI_					0	0	0		L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|64|3|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|64|3|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|64|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.813720703125	2	529.813856	1057.61316	0.25842	0.00013691	-0.40693	-0.0002156	-0.14852	-7.8686E-05	529.813469368245	28.135	0.81001	28.095	27.793	28.603	-0.039907					37	18	3	0	0	0	0.54908	1	1382	1382		49.536	3.0793	1	193350			45325	14594	30420	30433	51262	51262					0.0866570102307378
QLQKTRPVIL	10	Unmodified	_QLQKTRPVIL_					0	0	0		ENSG00000111335|ENST00000392583|OAS2;nc|ENSG00000111335|P29728|OAS2	ENSG00000111335|ENST00000392583|OAS2	ENSG00000111335|ENST00000392583|OAS2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.282470703125	2	598.379697	1194.74484	-0.66457	-0.00039766	4.1126	0.0024609	3.448	0.0020632	598.3821093385279	41.963	1.6924	41.925	41.45	43.143	-0.038223					61	40	3	0	0	0	0.37624	1	3215	3215		19.104	0	1	319630			45326	2574	30421	30434	51263	51263					0.15525931110846614
QLQLAINIA	9	Unmodified	_QLQLAINIA_					0	0	0			REV__ENSG00000172336|ENST00000303151|POP7	REV__ENSG00000172336|ENST00000303151|POP7	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.2979431152344	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.572	1	59.572	59.072	60.072	0								0	0	0	0.30053	1	5187	5187		30.504	1.3541	1		+		45327	21819	30422	30435	51264	51264					0.08914333339919267
QLQLEHLLL	9	Unmodified	_QLQLEHLLL_					0	0	0		ENSG00000109471|ENST00000226730|IL2	ENSG00000109471|ENST00000226730|IL2	ENSG00000109471|ENST00000226730|IL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8304443359375	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.76255	1	9170	9170		35.618	0	1	6029400			45328	2464	30423	30436	51265	51265					0.10094577919812764
QLQQIPLMS	9	Unmodified	_QLQQIPLMS_					0	0	0			REV__ENSG00000197417|ENST00000225519|SHPK	REV__ENSG00000197417|ENST00000225519|SHPK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2610473632812	2	529.289159	1056.56377	0.89402	0.0004732	-1.7029	-0.00090131	-0.80885	-0.00042811	529.2889536481607	53.785	0.54332	54.199	53.951	54.495	0.4139					27	12	3	0	0	0	0.20789	1	5472	5472		8.6937	0	1	261700	+		45329	23229	30424	30437	51266	51266					0.037746697426428
QLQQLKLPDLK	11	Unmodified	_QLQQLKLPDLK_					0	0	0			REV__nc|ENSG00000129116|Q8WX93|PALLD	REV__nc|ENSG00000129116|Q8WX93|PALLD	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.9394226074219	3	441.938005	1322.79219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.024	1	56.014	55.514	56.514	-0.010136								0	0	0	0.56276	1	5018	5018		17.167	0	1		+		45330	29835	30425	30438	51267	51267					0.1437016559116273
QLQRECYLK	9	Unmodified	_QLQRECYLK_					0	0	0		ENSG00000113739|ENST00000265087|STC2	ENSG00000113739|ENST00000265087|STC2	ENSG00000113739|ENST00000265087|STC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8092651367188	2	590.81079	1179.60703	0.77133	0.00045571	-3.8204	-0.0022571	-3.0491	-0.0018014	590.8085136634772	59.814	1.2746	59.908	59.359	60.634	0.094063					111	41	3	0	0	0	0.28163	1	5163	5163		66.429	0	1	4884800			45331	2741	30426	30439	51268	51268					0.024408595199020056
QLQRECYLK	9	Unmodified	_QLQRECYLK_					0	0	0		ENSG00000113739|ENST00000265087|STC2	ENSG00000113739|ENST00000265087|STC2	ENSG00000113739|ENST00000265087|STC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8101806640625	2	590.81079	1179.60703	-1.4475	-0.00085521	-1.6233	-0.00095904	-3.0708	-0.0018143	590.8098678631684	57.766	1.8735	58.16	57.738	59.612	0.39408					109	45	3	0	0	0	0.14386	1	6074	6074		84.916	13.62	1	12390000			45332	2741	30426	30439	51269	51269					0.024408595199020056
QLQRECYLK	9	Unmodified	_QLQRECYLK_					0	0	0		ENSG00000113739|ENST00000265087|STC2	ENSG00000113739|ENST00000265087|STC2	ENSG00000113739|ENST00000265087|STC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8095092773438	2	590.81079	1179.60703	0.42073	0.00024857	-3.3903	-0.002003	-2.9696	-0.0017545	590.8087931973557	57.669	1.7305	58.224	57.808	59.538	0.55513					104	42	3	0	0	0	0.14115	1	6087	6087		85.359	11.385	1	12960000			45333	2741	30426	30439	51270	51270					0.024408595199020056
QLQRGMQRLN	10	Unmodified	_QLQRGMQRLN_					0	0	0			REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3	REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3373413085938	2	622.338038	1242.66152	-0.27733	-0.0001726	-2.4814	-0.0015443	-2.7588	-0.0017169	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.85958	1	12170	12170		15.642	2.8301	1	419280	+		45334	19567	30427	30440	51271	51271					0.049898713913535175
QLQRKRHIGND	11	Unmodified	_QLQRKRHIGND_					0	0	0		nc|ENSG00000076864|P47736-3|RAP1GAP;ENST00000574515.1_1_17:2894647-2911342:+|nuORF;ENSG00000076864|ENST00000374765|RAP1GAP;nc|ENSG00000076864|P47736-2|RAP1GAP;nc|ENSG00000076864|P47736-4|RAP1GAP;nc|ENSG00000132359|Q684P5-3|RAP1GAP2;nc|ENSG00000132359|Q684P5-2|RAP1GAP2;ENSG00000132359|ENST00000254695|RAP1GAP2	nc|ENSG00000076864|P47736-3|RAP1GAP;nc|ENSG00000132359|Q684P5-3|RAP1GAP2	nc|ENSG00000076864|P47736-3|RAP1GAP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.24859619140625	3	455.588369	1363.74328	-0.64232	-0.00029263	2.2952	0.0010457	1.6529	0.00075304	455.58929395571	54.026	0.70036	54.002	53.602	54.303	-0.024754					29	17	2	0	0	0	0.17289	1	4862	4862		11.932	3.5251	1	256340			45335	14781;3787	30428	30441	51272	51272					0.0759569007477694
QLQTKRTAS	9	Unmodified	_QLQTKRTAS_					0	0	0		ENSG00000162669|ENST00000370425|HFM1;nc|ENSG00000162669|A2PYH4-2|HFM1;ENST00000462405.5_1_1:91728075-91813019:-|nuORF	ENSG00000162669|ENST00000370425|HFM1	ENSG00000162669|ENST00000370425|HFM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7935180664062	2	516.793455	1031.57236	-0.83709	-0.0004326	0.85733	0.00044306	0.020239	1.0459E-05	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.76764	1	8529	8529		34.173	2.6427	1	490270			45336	5715	30429	30442	51273	51273					0.05783359703445967
QLQTQLIG	8	Unmodified	_QLQTQLIG_					0	0	0			REV__nc|ENSG00000126001|Q9BV73-2|CEP250	REV__nc|ENSG00000126001|Q9BV73-2|CEP250	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.7611389160156	2	450.761092	899.507631	1.1042	0.00049772	-0.87473	-0.0003943	0.22944	0.00010342	450.76047020922516	33.711	0.79038	34.016	33.575	34.366	0.30494					37	18	4	0	0	0	0.87259	1	2453	2453		58.782	9.2459	1	581490	+		45337	18690	30430	30443	51274	51274					0.05385784897475787
QLQVLFKVLE	10	Unmodified	_QLQVLFKVLE_					0	0	0		ENSG00000161509|ENST00000293190|GRIN2C	ENSG00000161509|ENST00000293190|GRIN2C	ENSG00000161509|ENST00000293190|GRIN2C	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2485046386719	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.334	1	16.25	15.75	16.75	-0.083363								0	0	0	0.45132	1	130	130		24.232	0	1				45338	5636	30431	30444	51275	51275					0.12347706642412959
QLQVLILS	8	Unmodified	_QLQVLILS_					0	0	0		ENSG00000172061|ENST00000347624|LRRC15;nc|ENSG00000172061|Q8TF66-2|LRRC15	ENSG00000172061|ENST00000347624|LRRC15	ENSG00000172061|ENST00000347624|LRRC15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2898864746094	2	457.289485	912.564418	-1.1653	-0.00053286	1.1796	0.00053941	0.014329	6.5523E-06	457.28991348220376	87.889	0.86775	87.889	87.555	88.423	0					35	19	3	0	0	0	0.91977	1	8434	8434		45.952	0	1	290940			45339	6738	30432	30445	51276	51276					0.10463832454001931
QLRAIKLVV	9	Unmodified	_QLRAIKLVV_					0	0	0			REV__nc|ENSG00000162729|Q969P0-3|IGSF8	REV__nc|ENSG00000162729|Q969P0-3|IGSF8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	520.6502075195312	2	520.352951	1038.69135	0.82245	0.00042796	-0.32553	-0.00016939	0.49692	0.00025857	520.35289969946	108.92	0.39611	109	108.86	109.26	0.078552					29	17	2	0	0	0	0.20789	1	11713	11713		3.6843	0	1	655530	+		45340	20841	30433	30446	51277	51277					0.17355178398975113
QLRAVSFPE	9	Unmodified	_QLRAVSFPE_					0	0	0		nc|ENSG00000137872|Q8NFY4-7|SEMA6D;nc|ENSG00000137872|Q8NFY4-8|SEMA6D;nc|ENSG00000137872|Q8NFY4-3|SEMA6D;nc|ENSG00000137872|Q8NFY4-2|SEMA6D;nc|ENSG00000137872|Q8NFY4-4|SEMA6D;nc|ENSG00000137872|Q8NFY4-5|SEMA6D;nc|ENSG00000137872|Q8NFY4-6|SEMA6D;ENSG00000137872|ENST00000536845|SEMA6D	nc|ENSG00000137872|Q8NFY4-7|SEMA6D	nc|ENSG00000137872|Q8NFY4-7|SEMA6D	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035278320312	2	523.785099	1045.55564	-0.81168	-0.00042514	-2.7913	-0.0014621	-3.603	-0.0018872	523.7830039731908	88.378	0.78247	88.378	87.64	88.423	0					32	17	2	0	0	0	0.20789	1	8490	8490		14.865	0	1	43710			45341	4243	30434	30447	51278	51278					0.03468858817518594
QLRAYSVKLM	10	Unmodified	_QLRAYSVKLM_					0	0	0		ENST00000360902.1_1_7:98610997-98611291:+|nuORF	ENST00000360902.1_1_7:98610997-98611291:+|nuORF	ENST00000360902.1_1_7:98610997-98611291:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.84619140625	2	604.844633	1207.67471	-1.2735	-0.00077028	3.7311	0.0022568	2.4576	0.0014865	604.84680283311	96.063	3.2734	96.265	95.11	98.383	0.20242					203	76	4	0	0	0	0.85251	1	9918	9918		19.997	1.7347	1	597870			45342	10461	30435	30448	51279	51279					0.079183094507016
QLRDCIIGKR	10	Unmodified	_QLRDCIIGKR_					0	0	0		nc|ENSG00000153064|Q8NDB2-3|BANK1;nc|ENSG00000153064|Q8NDB2-2|BANK1;ENSG00000153064|ENST00000322953|BANK1;nc|ENSG00000153064|Q8NDB2-4|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.244873046875	3	401.232647	1200.67611	2.0182	0.00080978	3.8941	0.0015625	5.9124	0.0023722	401.23413365209126	20.582	0.66503	20.123	19.915	20.58	-0.4591					22	15	2	0	0	0	0.37624	1	711	711		37.508	1.0614	1	116700			45343	5212	30436	30449	51280	51280					0.08379943539489432
QLRFVQDWF	9	Unmodified	_QLRFVQDWF_					0	0	0		ENSG00000203734|ENST00000541398|ECT2L	ENSG00000203734|ENST00000541398|ECT2L	ENSG00000203734|ENST00000541398|ECT2L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2750549316406	3	413.548741	1237.62439	0.34771	0.00014379	4.4401	0.0018362	4.7878	0.00198	413.5503873490771	29.836	0.47285	29.746	29.532	30.004	-0.089546					25	10	3	0	0	0	0.20789	1	1895	1895		19.104	8.9996	1	84551			45344	8392	30437	30450	51281	51281					0.015085231171951818
QLRHAASV	8	Unmodified	_QLRHAASV_					0	0	0		nc|ENSG00000170820|P23945-2|FSHR;nc|ENSG00000170820|P23945-3|FSHR;ENSG00000170820|ENST00000406846|FSHR;nc|ENSG00000170820|P23945-4|FSHR	nc|ENSG00000170820|P23945-2|FSHR	nc|ENSG00000170820|P23945-2|FSHR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.2523498535156	2	441.251226	880.487899	2.6622	0.0011747	1.6986	0.00074951	4.3608	0.0019242	441.2518577446417	26.045	0.78318	25.614	25.312	26.096	-0.4311					37	17	4	0	0	0	0.92973	1	1414	1414		50.025	2.1089	1	253850			45345	6616	30438	30451	51282	51282					0.04287453677363828
QLRHIKVTKS	10	Unmodified	_QLRHIKVTKS_					0	0	0		ENST00000489956.1_1_1:49226876-49242395:-|nuORF	ENST00000489956.1_1_1:49226876-49242395:-|nuORF	ENST00000489956.1_1_1:49226876-49242395:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9255065917969	3	403.919056	1208.73534	-2.0251	-0.00081798	-2.61	-0.0010542	-4.6351	-0.0018722	403.917757150303	42.949	0.48149	43.647	43.506	43.987	0.69754					13	11	2	0	0	0	0.37624	1	3911	3911		23.378	4.8469	1	84638			45346	12660	30439	30452	51283	51283					0.13932162825290106
QLRHYEKL	8	Unmodified	_QLRHYEKL_					0	0	0			REV__ENST00000513426.1_1_5:53156036-53156228:+|nuORF	REV__ENST00000513426.1_1_5:53156036-53156228:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.804931640625	2	543.806365	1085.59818	0.22212	0.00012079	-0.037578	-2.0435E-05	0.18454	0.00010035	543.8060783464553	54.313	0.51321	54.287	54.022	54.535	-0.025955					29	14	3	0	0	0	0.9295	1	4887	4887		55.504	0	1	146680	+		45347	18896	30440	30453	51284	51284					0.05880253945747427
QLRKLFFIE	9	Unmodified	_QLRKLFFIE_					0	0	0			REV__nc|ENSG00000157106|Q96Q15-2|SMG1	REV__nc|ENSG00000157106|Q96Q15-2|SMG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3588256835938	2	597.355691	1192.69683	-0.44906	-0.00026825	0.70282	0.00041983	0.25377	0.00015159	597.3558318178953	59.116	1.0301	59.669	59.089	60.119	0.55323					59	25	3	0	0	0	0.51307	1	6230	6230		51.335	12.529	1	568150	+		45348	20528	30441	30454	51285	51285					0.10818857190815834
QLRKLFFIE	9	Unmodified	_QLRKLFFIE_					0	0	0			REV__nc|ENSG00000157106|Q96Q15-2|SMG1	REV__nc|ENSG00000157106|Q96Q15-2|SMG1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	597.355691	1192.69683	-0.63804	-0.00038114	1.1877	0.00070948	0.54967	0.00032835	597.3562120432921	59.176	1.2749	59.568	58.941	60.216	0.39209	-0.050319	0.00031174	NaN	51.335	69	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	461870	+		45349	20528	30441	30454							0.10818857190815834
QLRKWYYFRTR	11	Unmodified	_QLRKWYYFRTR_					0	0	0		ENST00000483733.1_1_3:120424930-120428703:-|nuORF	ENST00000483733.1_1_3:120424930-120428703:-|nuORF	ENST00000483733.1_1_3:120424930-120428703:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5526123046875	4	404.975668	1615.87356	0.32181	0.00013032	4.4696	0.0018101	4.7914	0.0019404	405.22851056138086	28.953	0.34705	28.924	28.65	28.997	-0.029207					9	7	2	0	0	0	0.18216	1	1790	1790		3.2113	0	1	44249			45350	12521	30442	30455	51286	51286					0.09026286073731171
QLRLILQN	8	Unmodified	_QLRLILQN_					0	0	0			REV__nc|ENSG00000141519|Q4G0X9-3|CCDC40	REV__nc|ENSG00000141519|Q4G0X9-3|CCDC40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.3096008300781	2	499.311284	996.608014	-0.61652	-0.00030784	0.53936	0.00026931	-0.077158	-3.8526E-05	499.3113800220969	32.485	0.55836	32.612	32.375	32.933	0.12643					26	12	3	0	0	0	0.88944	1	2277	2277		57.811	11.859	1	246860	+		45351	19691	30443	30456	51287	51287					0.10957441951131841
QLRLILQN	8	Unmodified	_QLRLILQN_					0	0	0			REV__nc|ENSG00000141519|Q4G0X9-3|CCDC40	REV__nc|ENSG00000141519|Q4G0X9-3|CCDC40	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	499.311284	996.608014	0.73158	0.00036529	-0.81843	-0.00040865	-0.086849	-4.3365E-05	499.3107238652696	32.392	0.55627	32.499	32.232	32.788	0.10707	-0.056148	-0.00087626	NaN	57.811	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	273470	+		45352	19691	30443	30456							0.10957441951131841
QLRLMKPP	8	Unmodified	_QLRLMKPP_					0	0	0			REV__ENST00000554074.1_1_14:78174487-78178182:+|nuORF	REV__ENST00000554074.1_1_14:78174487-78178182:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7955017089844	2	491.796955	981.579357	-1.6329	-0.00080306	-1.8661	-0.00091774	-3.499	-0.0017208	491.7959208879528	43.173	1.2305	43.173	42.794	44.024	0					52	29	2	0	0	0	0.87922	1	3063	3063		31.955	0	1	189890	+		45353	28657	30444	30457	51288	51288					0.08783001050335315
QLRLMKPP	8	Unmodified	_QLRLMKPP_					0	0	0			REV__ENST00000554074.1_1_14:78174487-78178182:+|nuORF	REV__ENST00000554074.1_1_14:78174487-78178182:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79541015625	2	491.796955	981.579357	-1.9211	-0.00094481	-0.35505	-0.00017461	-2.2762	-0.0011194	491.7967978123057	73.119	0.75326	73.161	72.514	73.267	0.042114					44	31	2	0	0	0	0.81548	1	7041	7041		20.482	0	1	96217	+		45354	28657	30444	30457	51289	51289					0.08783001050335315
QLRPVPIPW	9	Unmodified	_QLRPVPIPW_					0	0	0			REV__ENST00000255108.7_1_1:44438316-44438679:+|nuORF	REV__ENST00000255108.7_1_1:44438316-44438679:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3325805664062	2	553.329476	1104.6444	1.115	0.00061697	4.2458	0.0023493	5.3608	0.0029663	553.3316729497465	96.557	1.6944	96.962	96.464	98.158	0.40498					120	40	4	0	0	0	0.74905	1	11590	11590		37.028	6.7108	1	3081200	+		45355	24317	30445	30458	51290	51290					0.09626318847836046
QLRQKAEKS	9	Unmodified	_QLRQKAEKS_					0	0	0			REV__ENSG00000196683|ENST00000358435|TOMM7	REV__ENSG00000196683|ENST00000358435|TOMM7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.31640625	2	544.314554	1086.61456	-1.687	-0.00091826	1.5647	0.00085171	-0.12228	-6.6558E-05	544.3152960234735	17.121	0.23308	17.121	16.972	17.205	0					21	10	3	0	0	0	0.76764	1	186	186		34.173	1.3601	1	94862	+		45356	23161	30446	30459	51291	51291					0.07471335111836197
QLRQKAEKS	9	Unmodified	_QLRQKAEKS_					0	0	0			REV__ENSG00000196683|ENST00000358435|TOMM7	REV__ENSG00000196683|ENST00000358435|TOMM7	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	544.314554	1086.61456	1.02	0.00055518	-1.6798	-0.00091433	-0.65983	-0.00035915	544.3134383618751	17.152	0.20255	17.07	16.966	17.169	-0.0821	0.011346	-0.0015351	NaN	34.173	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97394	+		45357	23161	30446	30459							0.07471335111836197
QLRRAADRRVL	11	Unmodified	_QLRRAADRRVL_					0	0	0		chr11:125593428-125595881|15|23.2|0.12|7.64|+|2|None,STT3A|1	chr11:125593428-125595881|15|23.2|0.12|7.64|+|2|None,STT3A|1	chr11:125593428-125595881|15|23.2|0.12|7.64|+|2|None,STT3A|1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9453125	3	451.944376	1352.8113	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.53	1	54.615	54.115	55.115	0.085423								0	0	0	0.56276	1	4516	4516		21.78	1.75	1				45358	96	30447	30460	51292	51292					0.14900559725447238
QLRRKKNHRQW	11	Unmodified	_QLRRKKNHRQW_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|47|2|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|47|2|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.31396484375	3	517.302675	1548.8862	0.8033	0.00041555	-0.20644	-0.00010679	0.59686	0.00030876	517.3022644192854	98.985	0.28038	99.142	99.074	99.354	0.15659					5	4	2	0	0	0	0.18066	1	10291	10291		6.001	0	1	129640	+		45359	29614	30448	30461	51293	51293					0.13370742256688573
QLRRLAPG	8	Unmodified	_QLRRLAPG_					0	0	0		ENSG00000114270|ENST00000681320|COL7A1;nc|ENSG00000114270|Q02388-2|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30169677734375	2	455.782693	909.550834	-1.7826	-0.00081249	0.93194	0.00042476	-0.85068	-0.00038772	455.7851098373374	45.979	0.2344	45.979	45.901	46.135	0					6	5	2	0	0	0	0.4196	1	3434	3434		4.3163	0.33103	1	13399			45360	2764	30449	30462	51294	51294					0.09244019465415931
QLRRRWRRRRW	11	Unmodified	_QLRRRWRRRRW_					0	0	0			REV__ENST00000597330.1_1_19:58557520-58558126:+|nuORF	REV__ENST00000597330.1_1_19:58557520-58558126:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.3555297851562	3	575.68048	1724.01961	4.0403	0.0023259	1.326	0.00076337	5.3664	0.0030893	575.680710852159	106.6	0.33908	106.75	106.62	106.96	0.14929					25	14	2	0	0	0	0.18425	1	13043	13043		0.37141	0.37141	1	77717	+		45361	29265	30450	30463	51295	51295					0.18656026153030325
QLRSLVGP	8	Unmodified	_QLRSLVGP_					0	0	0		ENSG00000167880|ENST00000301607|EVPL;ENST00000587569.5_1_17:74014525-74023279:-|nuORF	ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801208496094	2	435.263802	868.513051	1.1106	0.00048342	-0.68227	-0.00029697	0.42836	0.00018645	435.26356562879585	32.712	0.50504	32.924	32.723	33.228	0.21168					20	11	2	0	0	0	0.4196	1	2356	2356		31.955	5.2619	1	149610			45362	6335	30451	30464	51296	51296					0.07353508479945958
QLRSRIDD	8	Unmodified	_QLRSRIDD_					0	0	0			REV__ENST00000526564.1_1_8:145724415-145725789:+|nuORF	REV__ENST00000526564.1_1_8:145724415-145725789:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2906494140625	2	501.76998	1001.52541	1.0455	0.0005246	1.4055	0.00070523	2.451	0.0012298	501.7704821477021	86.28	0.59212	86.206	85.97	86.562	-0.073761					21	13	2	0	0	0	0.4196	1	8932	8932		17.365	0	1	93294	+		45363	20753	30452	30465	51297	51297					0.024705001523329884
QLRSSLSLRLP	11	Unmodified	_QLRSSLSLRLP_					0	0	0			REV__ENST00000277462.9_1_9:130887138-130890631:-|nuORF	REV__ENST00000277462.9_1_9:130887138-130890631:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.7510681152344	3	423.9261	1268.75647	-1.1843	-0.00050205	1.8122	0.00076825	0.62793	0.0002662	423.926488159655	39.865	0.73975	40.233	39.771	40.511	0.36797					44	17	4	0	0	0	0.17331	1	3365	3365		30.139	1.5624	1	243030	+		45364	24587	30453	30466	51298	51298					0.13284128134182538
QLRTLSLRPLL	11	Unmodified	_QLRTLSLRPLL_					0	0	0		ENSG00000250799|ENST00000653904|PRODH2	ENSG00000250799|ENST00000653904|PRODH2	ENSG00000250799|ENST00000653904|PRODH2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26776123046875	3	437.281995	1308.82415	-0.73928	-0.00032327	-2.4276	-0.0010616	-3.1669	-0.0013848	437.2819481066312	51.742	0.41342	51.719	51.566	51.979	-0.02343					12	9	2	0	0	0	0.17648	1	4576	4576		15.921	3.4878	1	23793			45365	8850	30454	30467	51299	51299					0.18209578065011556
QLSDLPPKP	9	Unmodified	_QLSDLPPKP_					0	0	0		nc|ENSG00000153317|Q9ULH1-2|ASAP1;ENSG00000153317|ENST00000518721|ASAP1	nc|ENSG00000153317|Q9ULH1-2|ASAP1	nc|ENSG00000153317|Q9ULH1-2|ASAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7809143066406	2	497.782025	993.549496	-0.90756	-0.00045177	0.91883	0.00045738	0.011267	5.6087E-06	497.7823095839269	38.693	0.58309	39.216	38.87	39.453	0.52236					31	13	4	0	0	0	0.18338	1	3203	3203		77.318	6.5014	1	514590			45366	5232	30455	30468	51300	51300					0.05246340585995313
QLSDLPPKP	9	Unmodified	_QLSDLPPKP_					0	0	0		nc|ENSG00000153317|Q9ULH1-2|ASAP1;ENSG00000153317|ENST00000518721|ASAP1	nc|ENSG00000153317|Q9ULH1-2|ASAP1	nc|ENSG00000153317|Q9ULH1-2|ASAP1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	497.782025	993.549496	-1.2254	-0.00061	1.0485	0.00052192	-0.17695	-8.8084E-05	497.78240868647987	38.786	0.92824	39.128	38.817	39.745	0.34187	-0.043816	6.3251E-05	NaN	77.318	38	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	519540			45367	5232	30455	30468							0.05246340585995313
QLSESYYIL	9	Unmodified	_QLSESYYIL_					0	0	0		ENSG00000117643|ENST00000374332|MAN1C1;ENST00000487493.1_1_1:26107225-26110277:+|nuORF	ENSG00000117643|ENST00000374332|MAN1C1	ENSG00000117643|ENST00000374332|MAN1C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.285888671875	2	558.284597	1114.55464	-1.0256	-0.0005726	1.1915	0.00066522	0.1659	9.262E-05	558.2848413699397	75.44	0.58796	75.486	75.204	75.792	0.045959					38	17	3	0	0	0	0.74721	1	7244	7244		37.159	5.2042	1	79645			45368	2995	30456	30469	51301	51301					0.0019459965794794698
QLSGAAKQP	9	Unmodified	_QLSGAAKQP_					0	0	0		nc|ENSG00000164616|Q9UKT6|FBXL21P	nc|ENSG00000164616|Q9UKT6|FBXL21P	nc|ENSG00000164616|Q9UKT6|FBXL21P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.25103759765625	2	450.250892	898.48723	0.38762	0.00017452	-0.21944	-9.8803E-05	0.16818	7.5721E-05	450.25063616936995	31.332	0.77067	31.335	30.971	31.742	0.0037212					45	17	5	0	0	0	0.21969	1	2132	2132		71.877	3.0906	1	1483200			45369	15061	30457	30470	51302	51302					0.03392614237657199
QLSGAPLH	8	Unmodified	_QLSGAPLH_					0	0	0			REV__ENST00000218548.10_1_13:25283962-25284932:+|nuORF	REV__ENST00000218548.10_1_13:25283962-25284932:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.72515869140625	2	411.727052	821.439552	0.11993	4.9378E-05	-1.4739	-0.00060682	-1.3539	-0.00055745	411.72628761383294	62.903	1.0103	63.458	62.993	64.003	0.55449					38	23	2	0	0	0	0.90024	1	6804	6804		39.021	3.8208	1	161220	+		45370	24144	30458	30471	51303	51303					0.021689600374770635
QLSGLLKKA	9	Unmodified	_QLSGLLKKA_					0	0	0			REV__ENSG00000171206|ENST00000643721|TRIM8	REV__ENSG00000171206|ENST00000643721|TRIM8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8047790527344	2	479.30821	956.601866	-1.1434	-0.00054806	-0.6899	-0.00033067	-1.8333	-0.00087874	479.30788493741795	41.699	0.6952	41.661	41.491	42.187	-0.038223					27	16	2	0	0	0	0.20789	1	3143	3143		19.104	7.5925	1	211320	+		45371	21720	30459	30472	51304	51304					0.12182923719603878
QLSGLRRWQV	10	Unmodified	_QLSGLRRWQV_					0	0	0			REV__chr14:89412490-89453074|25|11.32|0.68|4.05|-|1|TE_info:AluSq2,AluSq2_dup45381,Alu,SINE,donor,+,89453074,89453223|FOXN3,None|1	REV__chr14:89412490-89453074|25|11.32|0.68|4.05|-|1|TE_info:AluSq2,AluSq2_dup45381,Alu,SINE,donor,+,89453074,89453223|FOXN3,None|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.59124755859375	3	414.907039	1241.69929	0.66709	0.00027678	0.78954	0.00032758	1.4566	0.00060436	414.9081052280963	32.226	0.25608	32.333	32.189	32.446	0.10707					7	5	2	0	0	0	0.37624	1	2263	2263		39.873	13.123	1	16752	+		45372	15609	30460	30473	51305	51305					0.08810705648443218
QLSGRRVLV	9	Unmodified	_QLSGRRVLV_					0	0	0		ENSG00000068079|ENST00000415816|IFI35;nc|ENSG00000068079|P80217-2|IFI35	ENSG00000068079|ENST00000415816|IFI35	ENSG00000068079|ENST00000415816|IFI35	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.3240966796875	2	514.322183	1026.62981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.801	1	43.801	43.301	44.301	0								0	0	0	0.30416	1	3132	3132		29.15	2.4566	1				45373	1195	30461	30474	51306	51306					0.11756246699678741
QLSKLAEPK	9	Unmodified	_QLSKLAEPK_					0	0	0			REV__ENST00000479007.5_1_7:1474234-1478659:-|nuORF	REV__ENST00000479007.5_1_7:1474234-1478659:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.308837890625	2	507.303124	1012.5917	-0.48495	-0.00024602	1.0532	0.0005343	0.56826	0.00028828	507.30334278249245	49.744	0.41976	49.769	49.484	49.904	0.025578					15	10	2	0	0	0	0.20789	1	3859	3859		24.519	0.31644	1	126480	+		45374	21123	30462	30475	51307	51307					0.08590315994365483
QLSPHLCL	8	Unmodified	_QLSPHLCL_					0	0	0			REV__ENST00000368026.10_1_1:160970072-160970453:-|nuORF	REV__ENST00000368026.10_1_1:160970072-160970453:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3013000488281	2	455.744388	909.474223	-0.087232	-3.9755E-05	-3.1531	-0.001437	-3.2403	-0.0014768	455.7428909303944	35.917	0.27491	35.899	35.738	36.013	-0.018673					7	5	2	0	0	0	0.4196	1	2250	2250		14.664	5.8418	1	11967	+		45375	25585	30463	30476	51308	51308					0.015864598539110375
QLSRLKAHQL	10	Unmodified	_QLSRLKAHQL_					0	0	0		nc|ENSG00000130182|Q96SZ4|ZSCAN10;ENSG00000130182|ENST00000576985|ZSCAN10;nc|ENSG00000130182|Q96SZ4-3|ZSCAN10	nc|ENSG00000130182|Q96SZ4|ZSCAN10	nc|ENSG00000130182|Q96SZ4|ZSCAN10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.3589477539062	2	597.359296	1192.70404	-0.56757	-0.00033904	-1.0155	-0.00060663	-1.5831	-0.00094568	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.82886	1	10744	10744		37.812	6.2817	1	3951300			45376	3623	30464	30477	51309	51309					0.11539589791209437
QLSRPETNECF	11	Unmodified	_QLSRPETNECF_					0	0	0			REV__nc|ENSG00000135317|Q9Y5W7-2|SNX14	REV__nc|ENSG00000135317|Q9Y5W7-2|SNX14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879943847656	3	441.871443	1322.5925	-0.50492	-0.00022311	-0.25786	-0.00011394	-0.76278	-0.00033705	441.86962404020335	39.161	0.71719	39.172	38.627	39.345	0.011173					19	16	2	0	0	0	0.17302	1	2718	2718		33.039	9.5251	1	32653	+		45377	29863	30465	30478	51310	51310					-0.05589257418887428
QLSRRALL	8	Unmodified	_QLSRRALL_					0	0	0			REV__nc|ENSG00000069020|O15021-2|MAST4;REV__ENSG00000211456|ENST00000389061|SACM1L	REV__nc|ENSG00000069020|O15021-2|MAST4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80401611328125	2	478.803626	955.592698	0.30032	0.0001438	4.0728	0.0019501	4.3731	0.0020939	478.8054155827557	41.804	1.1764	41.773	41.067	42.244	-0.030991					72	29	3	0	0	0	0.8347	1	3052	3052		23.042	1.0826	1	345190	+		45378	16574;23597	30466	30479	51311	51311					0.11312575153931448
QLSSMLPFEN	10	Unmodified	_QLSSMLPFEN_					0	0	0			REV__ENST00000256689.9_1_12:46752655-46752838:-|nuORF	REV__ENST00000256689.9_1_12:46752655-46752838:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.2887573242188	2	583.281531	1164.54851	-0.43817	-0.00025558	0.99163	0.0005784	0.55346	0.00032282	583.2810332330771	75.198	0.60086	75.763	75.499	76.1	0.56458					28	14	3	0	0	0	0.76096	1	8541	8541		41.427	2.1738	1	369790	+		45379	24331	30467	30480	51312	51312					-0.02718241845218472
QLSTVRPTDGR	11	Unmodified	_QLSTVRPTDGR_					0	0	0			REV__ENST00000372397.6_1_X:106960162-106960288:-|nuORF	REV__ENST00000372397.6_1_X:106960162-106960288:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	615.3137817382812	2	615.333476	1228.6524	0.39623	0.00024382	3.0188	0.0018576	3.415	0.0021014	615.3355378908351	79.965	0.63136	80.492	80.275	80.907	0.52677					24	14	3	0	0	0	0.17527	1	9179	9179		40.058	10.909	1	432900	+		45380	25716	30468	30481	51313	51313					0.04721801306618545
QLSYHYPSK	9	Unmodified	_QLSYHYPSK_					0	0	0		ENST00000375153.7_1_1:19638904-19639291:+|nuORF	ENST00000375153.7_1_1:19638904-19639291:+|nuORF	ENST00000375153.7_1_1:19638904-19639291:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.7802124023438	2	561.782556	1121.55056	0.31807	0.00017869	-0.39941	-0.00022438	-0.081334	-4.5692E-05	561.7822462294486	46.807	0.63408	46.826	46.533	47.167	0.018967					36	16	3	0	0	0	0.29259	1	3463	3463		65.465	14.273	1	318170			45381	10791	30469	30482	51314	51314					-0.005354450451250159
QLTALPDLC	9	Unmodified	_QLTALPDLC_					0	0	0			REV__ENST00000532708.5_1_6:111896872-111896917:-|nuORF	REV__ENST00000532708.5_1_6:111896872-111896917:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.2535705566406	2	487.254785	972.495018	0.64568	0.00031461	-2.6141	-0.0012737	-1.9684	-0.00095911	487.25338430429883	28.873	0.79298	28.699	28.399	29.192	-0.17336					52	18	4	0	0	0	0.64922	1	1778	1778		44.117	0	1	1461400	+		45382	28331	30470	30483	51315	51315					0.007670054429240736
QLTDNANQL	9	Unmodified	_QLTDNANQL_					0	0	0		ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7531433105469	2	508.753995	1015.49344	-0.43112	-0.00021933	4.3686	0.0022226	3.9375	0.0020032	508.75606889010743	63.729	0.69307	64.116	63.79	64.483	0.38681					38	15	3	0	0	0	0.64555	1	6864	6864		44.377	1.981	1	328910			45383	8322	30471	30484	51316	51316					-0.0136891232148173
QLTEWQDLH	9	Unmodified	_QLTEWQDLH_					0	0	0		ENST00000518121.5_1_8:38250464-38262066:+|nuORF;nc|ENSG00000165046|Q2VYF4-4|LETM2;nc|ENSG00000165046|Q2VYF4-3|LETM2;nc|ENSG00000165046|Q2VYF4-2|LETM2;ENSG00000165046|ENST00000379957|LETM2	ENST00000518121.5_1_8:38250464-38262066:+|nuORF	ENST00000518121.5_1_8:38250464-38262066:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.7813110351562	2	585.28292	1168.55129	-0.30753	-0.00017999	-2.8253	-0.0016536	-3.1329	-0.0018336	585.2811868131729	16.286	0.17093	15.799	15.696	15.867	-0.48718					6	3	2	0	0	0	0.77244	1	110	110		32.812	2.3088	1	68371			45384	6040	30472	30485	51317	51317					-0.026246503960464906
QLTKKGTKTG	10	Unmodified	_QLTKKGTKTG_					0	0	0			REV__nc|ENSG00000120549|Q5T5P2-3|KIAA1217	REV__nc|ENSG00000120549|Q5T5P2-3|KIAA1217	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3187255859375	2	531.319306	1060.62406	2.5637	0.0013622	-2.509	-0.0013331	0.05478	2.9106E-05	531.3177191515188	95.1	2.5434	95.042	94.557	97.1	-0.057526					188	59	5	0	0	0	0.86047	1	10195	10195		23.523	1.5628	1	4072600	+		45385	18417	30473	30486	51318	51318					0.0961710339736328
QLTKKGTKTG	10	Unmodified	_QLTKKGTKTG_					0	0	0			REV__nc|ENSG00000120549|Q5T5P2-3|KIAA1217	REV__nc|ENSG00000120549|Q5T5P2-3|KIAA1217	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.318603515625	2	531.319306	1060.62406	1.2436	0.00066073	-1.246	-0.000662	-0.0023897	-1.2697E-06	531.3184005268905	94.973	2.3333	95.019	94.535	96.868	0.046173					183	54	5	0	0	0	0.8651	1	10124	10124		25.574	4.6271	1	4128600	+		45386	18417	30473	30486	51319	51319					0.0961710339736328
QLTKLGKPF	9	Unmodified	_QLTKLGKPF_					0	0	0		ENSG00000146425|ENST00000367089|DYNLT1	ENSG00000146425|ENST00000367089|DYNLT1	ENSG00000146425|ENST00000367089|DYNLT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3140869140625	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12782	12782		20.947	0.4651	1	4038100			45387	4845	30474	30487	51320	51320					0.10343210236646883
QLTLKKITNHK	11	Unmodified	_QLTLKKITNHK_					0	0	0			REV__ENSG00000186575|ENST00000338641|NF2	REV__ENSG00000186575|ENST00000338641|NF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.9397888183594	3	441.94175	1322.80342	-0.13164	-5.8177E-05	-4.1939	-0.0018535	-4.3256	-0.0019117	441.93974761618824	56.948	1.0225	56.935	56.674	57.696	-0.012203					78	36	3	0	0	0	0.73647	1	5135	5135		25.068	0.79185	1	317980	+		45388	22865	30475	30488	51321	51321					0.15492987685320259
QLTSKATV	8	Unmodified	_QLTSKATV_					0	0	0		nc|ENSG00000152936|Q8N9Z9-4|LMNTD1;nc|ENSG00000152936|Q8N9Z9|LMNTD1;ENSG00000152936|ENST00000458174|LMNTD1	nc|ENSG00000152936|Q8N9Z9-4|LMNTD1	nc|ENSG00000152936|Q8N9Z9-4|LMNTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	424.2502136230469	2	424.247818	846.481082	0.7342	0.00031148	4.3955	0.0018648	5.1297	0.0021763	424.2497618988356	107.12	1.1041	107.22	106.78	107.88	0.091255					91	26	5	0	0	0	0.85277	1	11533	11533		25.45	0	1	9522100			45389	5203	30476	30489	51322	51322					0.05170096006145286
QLTSTEPQ	8	Unmodified	_QLTSTEPQ_					0	0	0			REV__ENST00000494781.5_1_6:167412945-167425107:+|nuORF	REV__ENST00000494781.5_1_6:167412945-167425107:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.22869873046875	2	452.224539	902.434526	4.5148	0.0020417	1.6899	0.0007642	6.2046	0.0028059	452.2261030001731	107	0.85062	107.15	106.81	107.66	0.14929					69	29	5	0	0	0	0.87792	1	13107	13107		31.53	1.6883	1	2327200	+		45390	23607	30477	30490	51323	51323					-0.020593886157939778
QLTVTDTIG	9	Unmodified	_QLTVTDTIG_					0	0	0		nc|ENSG00000142687|Q8IZA0-2|KIAA0319L;ENSG00000142687|ENST00000325722|KIAA0319L;nc|ENSG00000142687|Q8IZA0-3|KIAA0319L;ENST00000485551.5_1_1:35906621-35936502:-|nuORF;ENST00000467109.1_1_1:35919156-35920053:-|nuORF	nc|ENSG00000142687|Q8IZA0-2|KIAA0319L	nc|ENSG00000142687|Q8IZA0-2|KIAA0319L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2549743652344	2	474.25584	946.497126	0.90723	0.00043026	-3.4257	-0.0016247	-2.5185	-0.0011944	474.2540659981243	22.601	1.5549	22.183	21.652	23.207	-0.41879					50	35	2	0	0	0	0.64922	1	960	960		44.117	6.9577	1	124210			45391	4581	30478	30491	51324	51324					0.021737574523740477
QLTWRDVQHL	10	Unmodified	_QLTWRDVQHL_					0	0	0		nc|ENSG00000140479|P29122-3|PCSK6;nc|ENSG00000140479|P29122-6|PCSK6;nc|ENSG00000140479|P29122-5|PCSK6;nc|ENSG00000140479|P29122-4|PCSK6;nc|ENSG00000140479|P29122-2|PCSK6;nc|ENSG00000140479|P29122-8|PCSK6;ENSG00000140479|ENST00000611716|PCSK6;nc|ENSG00000140479|P29122-7|PCSK6	nc|ENSG00000140479|P29122-3|PCSK6	nc|ENSG00000140479|P29122-3|PCSK6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3929443359375	2	648.346386	1294.67822	2.6464	0.0017158	-3.0304	-0.0019647	-0.38397	-0.00024894	648.3445246106402	107.78	0.17149	107.75	107.64	107.81	-0.031487					5	3	2	0	0	0	0.37624	1	11948	11948		33.922	3.6039	1	71110			45392	4437	30479	30492	51325	51325					0.04266695548926691
QLVGQRAGA	9	Unmodified	_QLVGQRAGA_					0	0	0			REV__ENST00000476527.6_1_3:15138164-15140563:-|nuORF	REV__ENST00000476527.6_1_3:15138164-15140563:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2579345703125	2	450.256508	898.498464	2.5113	0.0011307	1.4582	0.00065657	3.9695	0.0017873	450.25712397191535	26.02	1.659	25.589	25.109	26.768	-0.4311					129	37	5	0	0	0	0.58151	1	1376	1376		47.916	0	1	8434200	+		45393	27335	30480	30493	51326	51326					0.04515436331791989
QLVKRLLQLT	10	Unmodified	_QLVKRLLQLT_					0	0	0			REV__ENSG00000113716|ENST00000502717|HMGXB3	REV__ENSG00000113716|ENST00000502717|HMGXB3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9290466308594	3	404.599324	1210.77614	0.26338	0.00010656	-3.3469	-0.0013541	-3.0835	-0.0012476	404.59799081593735	48.443	1.5175	48.48	48.033	49.551	0.037731					58	36	2	0	0	0	0.37624	1	3746	3746		13.508	0	1	164490	+		45394	18008	30481	30494	51327	51327					0.17918504144927283
QLVLLGLP	8	Unmodified	_QLVLLGLP_					0	0	0			REV__nc|ENSG00000197558|A2VEC9|SSPOP	REV__nc|ENSG00000197558|A2VEC9|SSPOP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.30279541015625	2	426.781296	851.54804	-0.2853	-0.00012176	-1.95	-0.00083221	-2.2353	-0.00095397	426.7818820437964	64.336	0.15713	64.302	64.179	64.337	-0.034256					6	4	2	0	0	0	0.4196	1	6133	6133		13.775	0	1	40731	+		45395	30139	30482	30495	51328	51328					0.11632751287891097
QLVLLIIIV	9	Unmodified	_QLVLLIIIV_					0	0	0			REV__ENSG00000221813|ENST00000641698|OR6B1	REV__ENSG00000221813|ENST00000641698|OR6B1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.3630981445312	2	512.362453	1022.71035	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.5	1	118.59	118.09	119.09	0.087753								0	0	0	0.35327	1	12498	12498		13.775	0	1		+		45396	23705	30483	30496	51329	51329					0.1999071497004934
QLVLTGGTG	9	Unmodified	_QLVLTGGTG_					0	0	0		nc|ENSG00000178188|Q9NRF2-2|SH2B1;nc|ENSG00000178188|Q9NRF2-3|SH2B1;ENSG00000178188|ENST00000684370|SH2B1	nc|ENSG00000178188|Q9NRF2-2|SH2B1	nc|ENSG00000178188|Q9NRF2-2|SH2B1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5926208496094	2	423.239993	844.465432	-0.44026	-0.00018634	0.41139	0.00017412	-0.028868	-1.2218E-05	423.24004529285713	47.827	0.40155	48.75	48.542	48.944	0.92315					14	9	2	0	0	0	0.20789	1	4564	4564		10.866	3.1753	1	152420			45397	7191	30484	30497	51330	51330					0.03697809489108295
QLVPRRVGELV	11	Unmodified	_QLVPRRVGELV_					0	0	0		ENST00000589611.1_1_18:43669658-43669820:-|nuORF	ENST00000589611.1_1_18:43669658-43669820:-|nuORF	ENST00000589611.1_1_18:43669658-43669820:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7513732910156	3	422.594461	1264.76155	-0.48031	-0.00020298	-3.7059	-0.0015661	-4.1863	-0.0017691	422.92738618104113	74.275	0.41993	74.231	74.15	74.57	-0.043877					16	14	2	0	0	0	0.17305	1	7302	7302		18.531	4.445	1	30892			45398	14241	30485	30498	51331	51331					0.13976431996798055
QLVPVTLL	8	Unmodified	_QLVPVTLL_					0	0	0		ENSG00000092421|ENST00000343348|SEMA6A;nc|ENSG00000092421|Q9H2E6-2|SEMA6A	ENSG00000092421|ENST00000343348|SEMA6A	ENSG00000092421|ENST00000343348|SEMA6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.787841796875	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.82419	1	3667	3667		13.775	0.81615	1	539980			45399	1698	30486	30499	51332	51332					0.11308733942325944
QLVQPHVY	8	Unmodified	_QLVQPHVY_					0	0	0			REV__ENSG00000167670|ENST00000301280|CHAF1A	REV__ENSG00000167670|ENST00000301280|CHAF1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.27227783203125	2	492.269084	982.523616	-0.55188	-0.00027167	-0.38757	-0.00019079	-0.93945	-0.00046246	492.26945223096726	48.084	0.80656	49.008	48.542	49.349	0.92315					40	19	3	0	0	0	0.93529	1	4643	4643		52.299	4.3836	1	995720	+		45400	21413	30487	30500	51333	51333					0.03165491134370768
QLVSLKVSAMR	11	Unmodified	_QLVSLKVSAMR_					0	0	0			REV__ENST00000426647.2_1_7:32852458-32867019:+|nuORF	REV__ENST00000426647.2_1_7:32852458-32867019:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	411.24444580078125	3	411.244552	1230.71183	-0.96242	-0.00039579	-0.58985	-0.00024257	-1.5523	-0.00063836	411.5787168011258	103.17	0.55617	103.17	102.87	103.43	0					34	13	3	0	0	0	0.6396	3	10572	10551;10563;10572		39.873	3.4574	1	1384400	+		45401	26547	30488	30501	51334;51335;51336	51336					0.10569980996478989
QLVSLKVSAMR	11	Unmodified	_QLVSLKVSAMR_					0	0	0			REV__ENST00000426647.2_1_7:32852458-32867019:+|nuORF	REV__ENST00000426647.2_1_7:32852458-32867019:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	411.2439880371094	3	411.244552	1230.71183	0.73407	0.00030188	-2.8258	-0.0011621	-2.0917	-0.00086021	411.5776849607496	102.96	0.51617	103.08	102.85	103.37	0.12622					23	12	3	0	0	0	0.64964	1	10867	10867		38.714	5.6747	1	1052600	+		45402	26547	30488	30501	51337	51337					0.10569980996478989
QLVSLKVSAMR	11	Unmodified	_QLVSLKVSAMR_					0	0	0			REV__ENST00000426647.2_1_7:32852458-32867019:+|nuORF	REV__ENST00000426647.2_1_7:32852458-32867019:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	411.244552	1230.71183	-1.7909	-0.00073651	-0.077613	-3.1918E-05	-1.8685	-0.00076843	411.2443310153243	102.88	0.55746	103.06	102.8	103.36	0.18297	-0.028547	0.0032971	NaN	39.873	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	987160	+		45403	26547	30488	30501							0.10569980996478989
QLVSLKVSAMR	11	Unmodified	_QLVSLKVSAMR_					0	0	0			REV__ENST00000426647.2_1_7:32852458-32867019:+|nuORF	REV__ENST00000426647.2_1_7:32852458-32867019:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	411.244552	1230.71183	0.73407	0.00030188	-2.8258	-0.0011621	-2.0917	-0.00086021	411.5776849607496	102.96	0.51617	103.08	102.85	103.37	0.12622	-0.010043	-9.3391E-05	NaN	39.873	23	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1052600	+		45404	26547	30488	30501							0.10569980996478989
QLVTRGIDM	9	Unmodified	_QLVTRGIDM_					0	0	0			REV__nc|ENSG00000131373|Q9UJ83-2|HACL1	REV__nc|ENSG00000131373|Q9UJ83-2|HACL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7778930664062	2	516.778959	1031.54336	-0.53903	-0.00027856	-3.0465	-0.0015744	-3.5855	-0.0018529	516.7775852931438	47.442	0.87286	47.914	47.476	48.349	0.47139					76	21	6	0	0	0	0.21969	1	4518	4518		71.877	6.0743	1	3356300	+		45405	18945	30489	30502	51338	51338					0.028854990827994698
QLWPVLITV	9	Unmodified	_QLWPVLITV_					0	0	0			REV__ENST00000540839.7_3_16:67563547-67572402:+|nuORF	REV__ENST00000540839.7_3_16:67563547-67572402:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7872924804688	2	534.826235	1067.63792	0.11182	5.9803E-05	-0.44177	-0.00023627	-0.32995	-0.00017647	534.8258917004438	78.56	0.55142	78.971	78.717	79.269	0.41059					22	12	2	0	0	0	0.20789	1	8951	8951		10.265	0	1	252490	+		45406	28472	30490	30503	51339	51339					0.10680380896451425
QLWQLLLWEIL	11	Unmodified	_QLWQLLLWEIL_					0	0	0		ENST00000297632.7_2_8:125334358-125339602:-|nuORF	ENST00000297632.7_2_8:125334358-125339602:-|nuORF	ENST00000297632.7_2_8:125334358-125339602:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.2850646972656	3	485.618384	1453.83332	-0.090769	-4.4079E-05	-4.3912	-0.0021324	-4.4819	-0.0021765	485.6162406289808	59.547	1.0446	59.533	58.927	59.972	-0.013733					40	28	2	0	0	0	0.17911	1	5481	5481		24.232	7.702	1	137780			45407	9764	30491	30504	51340	51340					0.12455926630673275
QLWQLLLWEIL	11	Unmodified	_QLWQLLLWEIL_					0	0	0		ENST00000297632.7_2_8:125334358-125339602:-|nuORF	ENST00000297632.7_2_8:125334358-125339602:-|nuORF	ENST00000297632.7_2_8:125334358-125339602:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	485.618384	1453.83332	-0.78821	-0.00038277	-3.3027	-0.0016039	-4.0909	-0.0019866	485.6166906346317	59.168	0.82854	59.255	58.925	59.753	0.087132	-0.094609	0.0005326	NaN	24.232	39	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147910			45408	9764	30491	30504							0.12455926630673275
QLWQLLLWEIL	11	Unmodified	_QLWQLLLWEIL_					0	0	0		ENST00000297632.7_2_8:125334358-125339602:-|nuORF	ENST00000297632.7_2_8:125334358-125339602:-|nuORF	ENST00000297632.7_2_8:125334358-125339602:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	485.618384	1453.83332	0.41346	0.00020078	-4.6744	-0.00227	-4.261	-0.0020692	485.61610624541754	59.177	1.0877	59.291	58.9	59.987	0.11396	-0.058647	-0.0014658	NaN	24.232	40	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138470			45409	9764	30491	30504							0.12455926630673275
QLWQLLLWEIL	11	Unmodified	_QLWQLLLWEIL_					0	0	0		ENST00000297632.7_2_8:125334358-125339602:-|nuORF	ENST00000297632.7_2_8:125334358-125339602:-|nuORF	ENST00000297632.7_2_8:125334358-125339602:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	485.618384	1453.83332	-0.64533	-0.00031338	-3.5823	-0.0017396	-4.2276	-0.002053	485.6166188043603	59.233	1.0725	59.225	58.852	59.924	-0.0074387	-0.12443	0.00012533	NaN	24.232	50	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73997			45410	9764	30491	30504							0.12455926630673275
QLWRGRWRRRW	11	Unmodified	_QLWRGRWRRRW_					0	0	0		ENST00000216410.7_1_14:53258232-53258316:-|nuORF	ENST00000216410.7_1_14:53258232-53258316:-|nuORF	ENST00000216410.7_1_14:53258232-53258316:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.98828125	3	552.646664	1654.91816	0.20591	0.00011379	4.4005	0.0024319	4.6065	0.0025457	552.6489267525362	59.639	0.58605	59.733	59.479	60.065	0.094059					33	16	3	0	0	0	0.80813	1	5118	5118		9.6461	6.6202	1	103150			45411	9137	30492	30505	51341	51341					0.11690154730467839
QLWRGRWRRRW	11	Unmodified	_QLWRGRWRRRW_					0	0	0		ENST00000216410.7_1_14:53258232-53258316:-|nuORF	ENST00000216410.7_1_14:53258232-53258316:-|nuORF	ENST00000216410.7_1_14:53258232-53258316:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	552.646664	1654.91816	-0.44326	-0.00024497	5.5925	0.0030907	5.1493	0.0028457	552.6499670374653	59.824	0.54626	59.825	59.484	60.031	0.00051117	0.0043151	0.00084789	NaN	9.6461	37	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123740			45412	9137	30492	30505							0.11690154730467839
QLWRLLLYRER	11	Unmodified	_QLWRLLLYRER_					0	0	0		ENSG00000180998|ENST00000321662|GPR137C	ENSG00000180998|ENST00000321662|GPR137C	ENSG00000180998|ENST00000321662|GPR137C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.9705810546875	3	515.971932	1544.89397	0.3331	0.00017187	-2.805	-0.0014473	-2.4719	-0.0012754	515.9701906245115	17.878	0.52527	17.257	17.06	17.585	-0.62141					30	12	4	0	0	0	0.81892	1	319	319		8.0344	2.0333	1	178550			45413	7364	30493	30506	51342	51342					0.1433145673358922
QLYDKGLVY	9	Unmodified	_QLYDKGLVY_					0	0	0		ENSG00000196305|ENST00000443024|IARS1	ENSG00000196305|ENST00000443024|IARS1	ENSG00000196305|ENST00000443024|IARS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.7951049804688	2	549.795132	1097.57571	-0.39654	-0.00021801	0.42328	0.00023272	0.026742	1.4702E-05	549.795208908674	55.091	0.62726	55.492	55.196	55.824	0.40101					42	14	4	0	0	0	0.21969	1	5623	5623		71.877	9.7701	1	1270900			45414	8036	30494	30507	51343	51343					0.030826097574845335
QLYDKGLVY	9	Unmodified	_QLYDKGLVY_					0	0	0		ENSG00000196305|ENST00000443024|IARS1	ENSG00000196305|ENST00000443024|IARS1	ENSG00000196305|ENST00000443024|IARS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.7966918945312	2	549.795132	1097.57571	-0.22795	-0.00012533	0.1441	7.9226E-05	-0.083849	-4.6099E-05	549.7950385770134	54.895	0.88051	55.464	55.153	56.033	0.56836					46	20	4	0	0	0	0.28163	2	5625	5625;5637		66.429	16.988	1	1459500			45415	8036	30494	30507	51344;51345	51344					0.030826097574845335
QLYEKGLYY	9	Unmodified	_QLYEKGLYY_					0	0	0		ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF	ENSG00000157796|ENST00000399820|WDR19	ENSG00000157796|ENST00000399820|WDR19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	588.8001708984375	2	588.800414	1175.58628	-0.19654	-0.00011572	0.85478	0.0005033	0.65824	0.00038757	588.8005159239967	53.82	0.67089	54.234	53.994	54.665	0.4139					35	15	4	0	0	0	0.073112	3	5441	5441;5453;5468		99.375	25.4	1	1163900			45416	5449	30495	30508	51346;51347;51348	51346					0.005505924119006522
QLYEKGLYY	9	Unmodified	_QLYEKGLYY_					0	0	0		ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF	ENSG00000157796|ENST00000399820|WDR19	ENSG00000157796|ENST00000399820|WDR19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.8007202148438	2	588.800414	1175.58628	-0.23894	-0.00014069	0.40703	0.00023966	0.1681	9.8976E-05	588.8003935335096	53.601	0.91781	54.185	53.914	54.832	0.58474					38	21	3	0	0	0	0.057432	2	5448	5437;5448		104.75	35.96	1	1164600			45417	5449	30495	30508	51349;51350	51350					0.005505924119006522
QLYKEQLAK	9	Unmodified	_QLYKEQLAK_					0	0	0		ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9	ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8222045898438	2	560.821681	1119.62881	-0.44397	-0.00024899	0.49399	0.00027704	0.050025	2.8055E-05	560.8217938230096	30.058	0.70371	30.087	29.791	30.495	0.028618					36	15	4	0	0	0	0.07589	3	1935	1925;1935;1946		98.629	26.766	1	503490			45418	1829	30496	30509	51351;51352;51353	51352					0.07377987540144204
QLYKEQLAK	9	Unmodified	_QLYKEQLAK_					0	0	0		ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9	ENSG00000100345|ENST00000216181|MYH9	ENSG00000100345|ENST00000216181|MYH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.821044921875	2	560.821681	1119.62881	0.38015	0.0002132	-0.44501	-0.00024957	-0.064863	-3.6377E-05	560.8213387874321	30.208	0.65522	30.118	29.875	30.53	-0.089544					30	14	3	0	0	0	0.038282	2	1973	1973;1983		113.41	23.042	1	571870			45419	1829	30496	30509	51354;51355	51354					0.07377987540144204
QLYNQILLLK	10	Unmodified	_QLYNQILLLK_					0	0	0		ENST00000344851.4_1_6:158659294-158663164:-|nuORF	ENST00000344851.4_1_6:158659294-158663164:-|nuORF	ENST00000344851.4_1_6:158659294-158663164:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.9252014160156	3	415.923696	1244.74926	-0.1002	-4.1678E-05	2.9516	0.0012276	2.8514	0.0011859	415.9248786709585	28.616	1.3458	28.579	27.989	29.335	-0.037411					80	31	4	0	0	0	0.51401	1	1715	1715		54.722	1.6334	1	965320			45420	10298	30497	30510	51356	51356					0.13667395533752824
QLYPRNFLR	9	Unmodified	_QLYPRNFLR_					0	0	0		ENSG00000182154|ENST00000371443|MRPL41	ENSG00000182154|ENST00000371443|MRPL41	ENSG00000182154|ENST00000371443|MRPL41	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.8432006835938	2	603.840739	1205.66693	2.904	0.0017536	0.25596	0.00015456	3.16	0.0019081	603.8408639395307	102.57	0.46542	102.86	102.51	102.98	0.29865					25	10	3	0	0	0	0.78058	1	12504	12504		30.504	5.9844	1	585380			45421	7426	30498	30511	51357	51357					0.07231918245452107
QLYRHSQEK	9	Unmodified	_QLYRHSQEK_					0	0	0		ENST00000497302.1_1_1:12049245-12049278:+|nuORF	ENST00000497302.1_1_1:12049245-12049278:+|nuORF	ENST00000497302.1_1_1:12049245-12049278:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.808837890625	2	594.809636	1187.60472	0.17264	0.00010269	-0.35277	-0.00020983	-0.18013	-0.00010714	594.8093295310281	17.386	0.35937	16.775	16.613	16.972	-0.6107					16	7	3	0	0	0	0.044173	1	251	251		110.12	35.077	1	294460			45422	12799	30499	30512	51358	51358					0.018421471064584694
QLYRHSQEK	9	Unmodified	_QLYRHSQEK_					0	0	0		ENST00000497302.1_1_1:12049245-12049278:+|nuORF	ENST00000497302.1_1_1:12049245-12049278:+|nuORF	ENST00000497302.1_1_1:12049245-12049278:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	594.809636	1187.60472	0.56596	0.00033664	-0.68652	-0.00040835	-0.12056	-7.1712E-05	594.8091488719409	17.31	0.36615	16.828	16.625	16.991	-0.48256	0.02646	-0.0002081	NaN	110.12	19	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	256140			45423	12799	30499	30512							0.018421471064584694
QLYRYAER	8	Unmodified	_QLYRYAER_					0	0	0			REV__ENST00000554744.1_1_14:81964730-81972475:-|nuORF	REV__ENST00000554744.1_1_14:81964730-81972475:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.8291015625	2	549.788173	1097.56179	-1.9722	-0.0010843	-0.015925	-8.7554E-06	-1.9881	-0.001093	549.788053773077	43.081	0.72316	43.855	43.54	44.263	0.7738					38	17	4	0	0	0	0.4196	1	3875	3875		35.618	0	1	689800	+		45424	16626	30500	30513	51359	51359					0.016913770490191382
QLYSTILSH	9	Unmodified	_QLYSTILSH_					0	0	0		ENSG00000213654|ENST00000375040|GPSM3	ENSG00000213654|ENST00000375040|GPSM3	ENSG00000213654|ENST00000375040|GPSM3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2857055664062	2	531.284931	1060.55531	0.76638	0.00040717	-0.48759	-0.00025905	0.27879	0.00014812	531.2844722682192	55.118	0.79617	55.519	55.069	55.866	0.40101					38	18	3	0	0	0	0.062302	2	5638	5638;5651		102.77	42.479	1	2419100			45425	8598	30501	30514	51360;51361	51360					0.027454390976799914
QLYSTILSH	9	Unmodified	_QLYSTILSH_					0	0	0		ENSG00000213654|ENST00000375040|GPSM3	ENSG00000213654|ENST00000375040|GPSM3	ENSG00000213654|ENST00000375040|GPSM3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2861938476562	2	531.284931	1060.55531	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.837	1	55.405	54.905	55.905	0.56836								0	0	0	0.048901	1	5618	5618		87.754	2.3948	1				45426	8598	30501	30514	51362	51362					0.027454390976799914
QLYSTILSH	9	Unmodified	_QLYSTILSH_					0	0	0		ENSG00000213654|ENST00000375040|GPSM3	ENSG00000213654|ENST00000375040|GPSM3	ENSG00000213654|ENST00000375040|GPSM3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2857055664062	2	531.284931	1060.55531	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.992	1	55.56	55.06	56.06	0.56836								0	0	0	0.0064362	1	5640	5640		111.65	45.845	1				45427	8598	30501	30514	51363	51363					0.027454390976799914
QLYVASKKE	9	Unmodified	_QLYVASKKE_					0	0	0		ENSG00000134516|ENST00000520908|DOCK2;ENST00000522138.1_1_5:169064330-169108764:+|nuORF	ENSG00000134516|ENST00000520908|DOCK2	ENSG00000134516|ENST00000520908|DOCK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.3004150390625	2	533.300581	1064.58661	-0.46862	-0.00024992	0.32551	0.00017359	-0.14311	-7.6322E-05	533.3007266349649	31.256	2.7034	31.336	29.971	32.674	0.079834					123	61	4	0	0	0	0.54908	1	2103	2103		49.536	4.5138	1	663570			45428	3939	30502	30515	51364	51364					0.056900121317767116
QLYWSHPRK	9	Unmodified	_QLYWSHPRK_					0	0	0		ENST00000557367.2_1_14:50053001-50053064:-|nuORF;ENSG00000213741|ENST00000245458|RPS29;nc|ENSG00000213741|P62273-2|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5525207519531	3	405.552485	1213.63563	0.31154	0.00012634	-0.1617	-6.5578E-05	0.14984	6.0767E-05	405.55242896235654	28.737	3.0603	28.708	27.908	30.968	-0.029207					186	70	5	0	0	0	0.58063	2	1730	1730;1802		47.96	12.781	1	9803100			45429	8601	30503	30516	51365;51366	51365					0.03735345211339336
QLYWSHPRK	9	Unmodified	_QLYWSHPRK_					0	0	0		ENST00000557367.2_1_14:50053001-50053064:-|nuORF;ENSG00000213741|ENST00000245458|RPS29;nc|ENSG00000213741|P62273-2|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	607.8250732421875	2	607.825089	1213.63563	-0.26133	-0.00015885	0.33527	0.00020379	0.07394	4.4943E-05	607.8251794964127	28.702	1.1503	28.673	28.366	29.517	-0.029207					69	26	4	0	0	0	0.0358	4	1760	1737;1749;1760;1772		110.12	31.452	1	1259800			45430	8601	30503	30516	51367;51368;51369;51370	51369					0.03735345211339336
QLYWSHPRK	9	Unmodified	_QLYWSHPRK_					0	0	0		ENST00000557367.2_1_14:50053001-50053064:-|nuORF;ENSG00000213741|ENST00000245458|RPS29;nc|ENSG00000213741|P62273-2|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	607.8251953125	2	607.825089	1213.63563	0.88536	0.00053814	-0.83732	-0.00050894	0.048046	2.9204E-05	607.8245071246821	28.849	0.95527	28.676	28.365	29.32	-0.17336					59	22	4	0	0	0	0.040465	5	1783	1763;1772;1783;1795;1809		85.161	25.043	1	1212100			45431	8601	30503	30516	51371;51372;51373;51374;51375	51373					0.03735345211339336
QLYWSHPRK	9	Unmodified	_QLYWSHPRK_					0	0	0		ENST00000557367.2_1_14:50053001-50053064:-|nuORF;ENSG00000213741|ENST00000245458|RPS29;nc|ENSG00000213741|P62273-2|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.5527038574219	3	405.552485	1213.63563	0.59269	0.00024037	-0.43479	-0.00017633	0.1579	6.4037E-05	405.5523269463935	28.869	3.2114	28.696	27.713	30.924	-0.17336					183	75	5	0	0	0	0.66686	3	1789	1789;1813;1839		42.864	10.876	1	9724600			45432	8601	30503	30516	51376;51377;51378	51376					0.03735345211339336
QMAIACGSR	9	Unmodified	_QMAIACGSR_					0	0	0		nc|ENSG00000120697|Q9Y673-2|ALG5;ENSG00000120697|ENST00000239891|ALG5	nc|ENSG00000120697|Q9Y673-2|ALG5	nc|ENSG00000120697|Q9Y673-2|ALG5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.7225036621094	2	468.723129	935.431706	-1.0178	-0.00047706	1.2267	0.00057497	0.2089	9.7918E-05	468.72367977500755	69.802	1.0969	69.938	69.737	70.834	0.13506					82	54	2	0	0	0	0.76764	1	6352	6352		34.173	0	1	1482700			45433	3146	30504	30517	51379	51379					-0.03859258545958255
QMEKKIAN	8	Unmodified	_QMEKKIAN_					0	0	0		ENST00000550317.1_1_12:111284592-111319020:+|nuORF;nc|ENSG00000173093|Q8NA47-2|CCDC63;ENSG00000173093|ENST00000308208|CCDC63	ENST00000550317.1_1_12:111284592-111319020:+|nuORF	ENST00000550317.1_1_12:111284592-111319020:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.5792236328125	2	481.260402	960.506251	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.894	1	67.027	66.527	67.527	0.13326								0	0	0	0.2939	1	5951	5951		27.882	1.0861	1				45434	6826	30505	30518	51380	51380					0.02441827537052177
QMHVYSLG	8	Unmodified	_QMHVYSLG_					0	0	0		ENST00000468556.1_1_10:49450143-49459678:-|nuORF;nc|ENSG00000170324|Q68DX3-3|FRMPD2;ENST00000486151.5_1_10:49420141-49482610:-|nuORF;ENSG00000170324|ENST00000374201|FRMPD2	ENST00000468556.1_1_10:49450143-49459678:-|nuORF	ENST00000468556.1_1_10:49450143-49459678:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.72509765625	2	467.726195	933.437837	-1.0737	-0.00050218	-0.27654	-0.00012935	-1.3502	-0.00063153	467.72591085184155	62.432	1.4312	62.82	62.273	63.704	0.38779					65	32	3	0	0	0	0.89043	1	6687	6687		35.618	5.1146	1	686640			45435	6576	30506	30519	51381	51381					-0.031544170427764584
QMIKKVQLKTL	11	Unmodified	_QMIKKVQLKTL_					0	0	0			REV__nc|ENSG00000157833|Q75VX8-3|GAREM2	REV__nc|ENSG00000157833|Q75VX8-3|GAREM2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	444.2457275390625	3	443.947736	1328.82138	-0.9619	-0.00042703	2.9393	0.0013049	1.9774	0.00087788	443.9489616428	107.66	0.97002	107.66	106.8	107.77	0					66	22	4	0	0	0	0.17784	1	11146	11146		8.4073	0	1	923820	+		45436	20567	30507	30520	51382	51382					0.17011986615807473
QMKALVCGP	9	Carbamidomethyl (C),Oxidation (M)	_QM(Oxidation (M))KALVC(Carbamidomethyl (C))GP_	QMKALVC(1)GP	QM(1)KALVCGP	QMKALVC(52)GP	QM(52)KALVCGP	0	1	1			REV__ENSG00000278540|ENST00000616317|ACACA	REV__ENSG00000278540|ENST00000616317|ACACA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.25299072265625	2	510.254262	1018.49397	0.72823	0.00037158	-2.382	-0.0012154	-1.6537	-0.00084383	510.2529887289039	23.767	0.55502	23.385	23.108	23.663	-0.38178					27	12	3	0	0	0	0.49378	1	1097	1097		52.299	13.493	1	297170	+		45437	24037	30508	30521	51383	51383	294	374			-0.014535321976154592
QMNQLTSNPL	10	Unmodified	_QMNQLTSNPL_					0	0	0			REV__ENSG00000101680|ENST00000389658|LAMA1	REV__ENSG00000101680|ENST00000389658|LAMA1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	573.288818359375	2	573.284605	1144.55466	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.296	1	40.378	39.878	40.878	0.081345								0	0	0	0.45132	1	2545	2545		45.972	8.1607	1		+		45438	17296	30509	30522	51384	51384					-0.011837236137125728
QMNRNGIL	8	Unmodified	_QMNRNGIL_					0	0	0			REV__ENSG00000083097|ENST00000349129|DOP1A	REV__ENSG00000083097|ENST00000349129|DOP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.245849609375	2	473.250369	944.486184	-0.75152	-0.00035566	-2.8907	-0.001368	-3.6422	-0.0017237	473.24804630390827	36.233	1.0837	36.177	35.34	36.424	-0.055904					45	23	3	0	0	0	0.884	1	2402	2402		33.516	0.70317	1	74474	+		45439	16847	30510	30523	51385	51385					0.011720765971290348
QMRIKHLLKS	10	Unmodified	_QMRIKHLLKS_					0	0	0		ENSG00000117000|ENST00000372771|RLF	ENSG00000117000|ENST00000372771|RLF	ENSG00000117000|ENST00000372771|RLF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3805541992188	2	627.379175	1252.7438	6.5804	0.0041284	-1.1772	-0.00073854	5.4032	0.0033899	627.3785016354675	112.85	0.36639	112.87	112.77	113.14	0.01696					21	13	2	0	0	0	0.85251	1	13660	13660		19.997	2.5288	1	54970			45440	2960	30511	30524	51386	51386					0.12753393470279661
QMRKFLSDPQ	10	Unmodified	_QMRKFLSDPQ_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	625.3203125	2	625.321522	1248.62849	-0.24573	-0.00015366	-2.299	-0.0014376	-2.5447	-0.0015913	625.3199751264785	64.714	1.3394	64.719	64.245	65.584	0.0046997					92	46	4	0	0	0	0.18173	2	6050	6035;6050		90.37	13.052	1	486230			45441	8133	30512	30525	51387;51388	51388					0.014122445486236757
QMRKVVREL	9	Unmodified	_QMRKVVREL_					0	0	0		ENSG00000102452|ENST00000251127|NALCN	ENSG00000102452|ENST00000251127|NALCN	ENSG00000102452|ENST00000251127|NALCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	579.8438720703125	2	579.842425	1157.6703	0.68543	0.00039744	2.1926	0.0012714	2.878	0.0016688	579.8435684562951	102.05	1.3312	102.24	101.84	103.17	0.19483					96	32	4	0	0	0	0.67345	1	10742	10742		42.396	0	1	2191200			45442	2005	30513	30526	51389	51389					0.09776845027840864
QMTEQRKNK	9	Unmodified	_QMTEQRKNK_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	581.8038330078125	2	581.803497	1161.59244	-0.84342	-0.00049071	1.504	0.000875	0.66053	0.0003843	581.8042209078138	64.934	0.90569	64.934	64.471	65.377	0					126	41	4	0	0	0	0.15959	1	5711	5711		82.241	7.9855	1	1021200			45443	3260	30514	30527	51390	51390					0.018107873717553957
QMTEQRKNK	9	Unmodified	_QMTEQRKNK_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.803466796875	2	581.803497	1161.59244	0.11403	6.6344E-05	0.29242	0.00017013	0.40646	0.00023648	581.8035838058198	64.735	1.1415	64.7	64.269	65.41	-0.034798					108	38	4	0	0	0	0.14386	1	6169	6169		84.916	5.2029	1	2150000			45444	3260	30514	30527	51391	51391					0.018107873717553957
QMTEQRKNK	9	Unmodified	_QMTEQRKNK_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	581.8037719726562	2	581.803497	1161.59244	0.64741	0.00037667	0.047899	2.7868E-05	0.69531	0.00040453	581.8033899164078	64.583	0.90575	64.709	64.291	65.197	0.12545					96	31	4	0	0	0	0.19818	1	5695	5695		74.255	1.3758	1	1338100			45445	3260	30514	30527	51392	51392					0.018107873717553957
QMTEQRKNK	9	Unmodified	_QMTEQRKNK_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.8040771484375	2	581.803497	1161.59244	0.55662	0.00032384	0.13773	8.0132E-05	0.69435	0.00040397	581.8034623871067	64.587	0.91196	64.711	64.307	65.219	0.12396					103	32	4	0	0	0	0.14386	1	5712	5712		84.916	2.675	1	1348900			45446	3260	30514	30527	51393	51393					0.018107873717553957
QMTILMLFNN	10	Oxidation (M)	_QMTILM(Oxidation (M))LFNN_		QMTILM(1)LFNN		QM(-44)TILM(44)LFNN	0	0	1		nc|ENSG00000036257|Q13618-3|CUL3;ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3;ENST00000487558.1_1_2:225360464-225362517:-|nuORF	nc|ENSG00000036257|Q13618-3|CUL3;ENST00000487558.1_1_2:225360464-225362517:-|nuORF	nc|ENSG00000036257|Q13618-3|CUL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.8107299804688	2	620.806859	1239.59917	0.1525	9.4673E-05	2.2698	0.0014091	2.4223	0.0015038	620.8084857499598	59.522	1.8774	60.075	59.343	61.22	0.55323					109	49	4	0	0	0	0.57924	1	6268	6268		51.193	9.7661	2	3699000			45447	901;12603	30515	30528	51394	51394		14			-0.011050357918520604
QMTIYRQLSQ	10	Unmodified	_QMTIYRQLSQ_					0	0	0		ENST00000317829.12_1_11:94604974-94605094:+|nuORF	ENST00000317829.12_1_11:94604974-94605094:+|nuORF	ENST00000317829.12_1_11:94604974-94605094:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3284301757812	2	634.326805	1266.63906	1.6756	0.0010629	-4.0817	-0.0025891	-2.4061	-0.0015263	634.3241495458176	57.188	1.611	57.743	57.355	58.966	0.55512					111	39	4	0	0	0	0.44803	1	6032	6032		60.118	0.18749	1	5227300			45448	9998	30516	30529	51395	51395					0.016402272030745735
QMVARLTPW	9	Unmodified	_QMVARLTPW_					0	0	0			REV__ENST00000487903.5_1_13:113536381-113537092:+|nuORF	REV__ENST00000487903.5_1_13:113536381-113537092:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.2990112304688	2	551.297319	1100.58008	0.35596	0.00019624	2.2459	0.0012382	2.6019	0.0014344	551.2983762488637	32.057	0.54276	32.006	31.778	32.32	-0.051033					20	11	2	0	0	0	0.76764	1	1842	1842		34.173	1.422	1	55560	+		45449	27586	30517	30530	51396	51396					0.03381795699374379
QMVDRYLSKQ	10	Unmodified	_QMVDRYLSKQ_					0	0	0			REV__ENST00000462251.1_1_19:11877828-11888701:+|nuORF	REV__ENST00000462251.1_1_19:11877828-11888701:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3250122070312	2	634.326805	1266.63906	-0.43105	-0.00027343	-2.1918	-0.0013903	-2.6228	-0.0016637	634.3254652292756	59.323	2.4593	59.357	58.521	60.98	0.033905					136	70	4	0	0	0	0.21786	1	5466	5466		82.241	0	1	3076800	+		45450	27048	30518	30531	51397	51397					0.01640227203051836
QMVERYLNK	9	Unmodified	_QMVERYLNK_					0	0	0			REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.80908203125	2	590.81079	1179.60703	-0.8677	-0.00051265	-2.4314	-0.0014365	-3.2991	-0.0019492	590.8092605790742	59.99	1.6283	59.99	59.57	61.199	0					167	67	3	0	0	0	0.049188	2	5243	5243;5252		108.09	9.4581	1	3570000	+		45451	22991	30519	30532	51398;51399	51398					0.02440859519924743
QMVERYLNK	9	Unmodified	_QMVERYLNK_					0	0	0			REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8088989257812	2	590.81079	1179.60703	-0.64683	-0.00038215	-2.809	-0.0016596	-3.4559	-0.0020418	590.8091423509106	59.998	1.5026	59.984	59.286	60.789	-0.013729					96	38	3	0	0	0	0.14386	4	5527	5516;5527;5535;5557		84.916	7.5979	1	6218400	+		45452	22991	30519	30532	51400;51401;51402;51403	51401					0.02440859519924743
QMVERYLNK	9	Unmodified	_QMVERYLNK_					0	0	0			REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8087768554688	2	590.81079	1179.60703	0.75906	0.00044846	-4.0836	-0.0024126	-3.3245	-0.0019642	590.8083889638864	59.878	1.5877	59.846	59.4	60.988	-0.031727					100	43	3	0	0	0	0.032438	3	5649	5630;5639;5649		116.9	23.708	1	6527800	+		45453	22991	30519	30532	51404;51405;51406	51406					0.02440859519924743
QMVERYLNK	9	Unmodified	_QMVERYLNK_					0	0	0			REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.80908203125	2	590.81079	1179.60703	-2.5816	-0.0015252	-0.69084	-0.00040815	-3.2724	-0.0019334	590.810388094793	59.822	1.6947	59.855	59.336	61.031	0.032822					113	47	3	0	0	0	0.049188	3	5543	5543;5553;5564		108.09	20.333	1	6301700	+		45454	22991	30519	30532	51407;51408;51409	51407					0.02440859519924743
QMVERYLNK	9	Unmodified	_QMVERYLNK_					0	0	0			REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.80908203125	2	590.81079	1179.60703	0.77133	0.00045571	-3.8204	-0.0022571	-3.0491	-0.0018014	590.8085136634772	59.814	1.2746	59.908	59.359	60.634	0.094063					111	41	3	0	0	0	0.084975	2	5135	5135;5144		96.19	5.8206	1	4884800	+		45455	22991	30519	30532	51410;51411	51410					0.02440859519924743
QMVERYLNK	9	Unmodified	_QMVERYLNK_					0	0	0			REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8090209960938	2	590.81079	1179.60703	0.522	0.0003084	-3.4822	-0.0020574	-2.9603	-0.0017489	590.8087294350913	59.786	1.1886	59.902	59.476	60.664	0.11676					102	40	3	0	0	0	0.14386	3	5155	5138;5155;5179		84.916	5.2029	1	4726100	+		45456	22991	30519	30532	51412;51413;51414	51413					0.02440859519924743
QMVERYLNK	9	Unmodified	_QMVERYLNK_					0	0	0			REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8092041015625	2	590.81079	1179.60703	-0.32322	-0.00019096	-2.5449	-0.0015035	-2.8681	-0.0016945	590.8092533729065	59.928	1.5542	59.928	59.528	61.083	0.00051117					123	53	3	0	0	0	0.17307	1	5163	5163		79.451	11.957	1	4758100	+		45457	22991	30519	30532	51415	51415					0.02440859519924743
QMVERYLNK	9	Unmodified	_QMVERYLNK_					0	0	0			REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8090209960938	2	590.81079	1179.60703	-1.4475	-0.00085521	-1.6233	-0.00095904	-3.0708	-0.0018143	590.8098678631684	57.766	1.8735	58.16	57.738	59.612	0.39408					109	45	3	0	0	0	0.21969	2	6089	6061;6089		71.877	3.0906	1	12390000	+		45458	22991	30519	30532	51416;51417	51417					0.02440859519924743
QMVERYLNK	9	Unmodified	_QMVERYLNK_					0	0	0			REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	REV__nc|ENSG00000214189|Q6ZQV5-2|ZNF788P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8088989257812	2	590.81079	1179.60703	0.42073	0.00024857	-3.3903	-0.002003	-2.9696	-0.0017545	590.8087931973557	57.669	1.7305	58.224	57.808	59.538	0.55513					104	42	3	0	0	0	0.14386	2	6001	6001;6013		84.916	8.1414	1	12960000	+		45459	22991	30519	30532	51418;51419	51418					0.02440859519924743
QMVHVPIP	8	Oxidation (M)	_QM(Oxidation (M))VHVPIP_		QM(1)VHVPIP		QM(47)VHVPIP	0	0	1		ENST00000524558.5_1_11:75274226-75274610:+|nuORF	ENST00000524558.5_1_11:75274226-75274610:+|nuORF	ENST00000524558.5_1_11:75274226-75274610:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.75518798828125	2	468.752213	935.489873	-0.11471	-5.3772E-05	4.482	0.0021009	4.3673	0.0020472	468.75412070279606	21.769	0.39813	21.712	21.542	21.94	-0.057203					25	14	2	0	0	0	0.92176	1	622	622		46.766	7.9603	1	61732			45460	13218	30520	30533	51420	51420		197			0.019547463709841395
QMVLLRKLCL	10	Unmodified	_QMVLLRKLCL_					0	0	0		ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107	ENSG00000111581|ENST00000229179|NUP107	ENSG00000111581|ENST00000229179|NUP107	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2479248046875	3	406.247128	1215.71956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.233	1	20.163	19.663	20.663	-0.070013								0	0	0	0.45132	1	495	495		21.686	0.65352	1				45461	2585	30521	30534	51421	51421					0.12032416992428807
QMVYNTVGTVR	11	Unmodified	_QMVYNTVGTVR_					0	0	0			REV__nc|ENSG00000129680|Q8IWC1-3|MAP7D3	REV__nc|ENSG00000129680|Q8IWC1-3|MAP7D3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.32568359375	2	634.326805	1266.63906	1.6756	0.0010629	-4.0817	-0.0025891	-2.4061	-0.0015263	634.3241495458176	57.188	1.611	57.743	57.355	58.966	0.55512					111	39	4	0	0	0	0.31387	1	5934	5934		72.879	1.0018	1	5227300	+		45462	18830	30522	30535	51422	51422					0.01640227203051836
QMYIGRLTAQ	10	Unmodified	_QMYIGRLTAQ_					0	0	0			REV__chr6:27127401-27132367|54|14.06|0.67|4.4|-|1|None,H2BC11|1	REV__chr6:27127401-27132367|54|14.06|0.67|4.4|-|1|None,H2BC11|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.810546875	2	590.81079	1179.60703	0.42073	0.00024857	-3.3903	-0.002003	-2.9696	-0.0017545	590.8087931973557	57.669	1.7305	58.224	57.808	59.538	0.55513					104	42	3	0	0	0	0.3985	1	6098	6098		64.207	0	1	12960000	+		45463	15878	30523	30536	51423	51423					0.02440859519924743
QNAAAAVLL	9	Unmodified	_QNAAAAVLL_					0	0	0			REV__ENST00000586361.5_1_19:36386996-36387795:-|nuORF	REV__ENST00000586361.5_1_19:36386996-36387795:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.21014404296875	2	435.75581	869.497067	0.12324	5.3703E-05	-1.2884	-0.00056141	-1.1651	-0.00050771	435.75500495205563	67.785	0.46159	68.333	68.072	68.534	0.54819					14	10	2	0	0	0	0.20789	1	7421	7421		18.324	0	1	99094	+		45464	21402	30524	30537	51424	51424					0.057098022430295714
QNAKFHIKQ	9	Unmodified	_QNAKFHIKQ_					0	0	0			REV__ENST00000539115.5_1_X:24229529-24229658:+|nuORF	REV__ENST00000539115.5_1_X:24229529-24229658:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.3047485351562	2	557.311815	1112.60908	-0.6282	-0.0003501	-2.0795	-0.0011589	-2.7077	-0.001509	557.3104531492095	40.508	0.19093	40.477	40.407	40.598	-0.030987					10	5	2	0	0	0	0.78536	1	2899	2899		29.15	7.1897	1	108050	+		45465	28445	30525	30538	51425	51425					0.05727656320027563
QNAKFHIKQ	9	Unmodified	_QNAKFHIKQ_					0	0	0			REV__ENST00000539115.5_1_X:24229529-24229658:+|nuORF	REV__ENST00000539115.5_1_X:24229529-24229658:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	557.311815	1112.60908	-0.6282	-0.0003501	-2.0795	-0.0011589	-2.7077	-0.001509	557.3104531492095	40.508	0.19093	40.477	40.407	40.598	-0.030987	0.010729	-0.00027494	NaN	29.15	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108050	+		45466	28445	30525	30538							0.05727656320027563
QNAKFHIKQ	9	Unmodified	_QNAKFHIKQ_					0	0	0			REV__ENST00000539115.5_1_X:24229529-24229658:+|nuORF	REV__ENST00000539115.5_1_X:24229529-24229658:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	557.311815	1112.60908	-0.75077	-0.00041841	-1.7169	-0.00095686	-2.4677	-0.0013753	557.3106853176839	40.448	0.36937	40.456	40.235	40.605	0.007309	-0.010729	0.00012921	NaN	29.15	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91254	+		45467	28445	30525	30538							0.05727656320027563
QNALHHHHG	9	Unmodified	_QNALHHHHG_					0	0	0		ENSG00000157540|ENST00000647188|DYRK1A;nc|ENSG00000157540|Q13627|DYRK1A	ENSG00000157540|ENST00000647188|DYRK1A	ENSG00000157540|ENST00000647188|DYRK1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7533569335938	2	525.752456	1049.49036	1.2123	0.00063735	1.2482	0.00065622	2.4604	0.0012936	525.7529847600721	22.702	0.43969	22.284	22.062	22.502	-0.41879					17	9	2	0	0	0	0.69914	1	948	948		40.573	12.69	1	96483			45468	5437	30526	30539	51426	51426					-0.032406978649760276
QNCCRVTNHW	10	Unmodified	_QNCCRVTNHW_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	630.4944458007812	2	630.771674	1259.52879	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.013	1	57.118	56.618	57.618	0.1055								0	0	0	0.45132	1	4821	4821		32.812	8.2932	1		+		45469	22690	30527	30540	51427	51427					-0.09058896336955513
QNCDDVCRILD	11	Unmodified	_QNCDDVCRILD_					0	0	0		nc|ENSG00000111737|Q15286-2|RAB35	nc|ENSG00000111737|Q15286-2|RAB35	nc|ENSG00000111737|Q15286-2|RAB35	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	647.2796630859375	2	647.281737	1292.54892	1.5693	0.0010158	-3.5795	-0.002317	-2.0102	-0.0013011	647.2794672984256	58.664	1.0563	59.217	58.718	59.775	0.55323					72	25	4	0	0	0	0.67041	1	6184	6184		36.318	5.9999	1	2912600			45470	14846	30528	30541	51428	51428					-0.08565190187664484
QNDELVEIL	9	Unmodified	_QNDELVEIL_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.8246459960938	2	536.779679	1071.5448	-0.42196	-0.0002265	0.64264	0.00034495	0.22068	0.00011846	536.7801289906278	74.785	0.45587	75.35	75.128	75.584	0.56458					13	10	2	0	0	0	0.20789	1	8447	8447		27.882	1.1893	1	83686	+		45471	16117	30529	30542	51429	51429					0.011894116525809295
QNDRCAGQNL	10	Unmodified	_QNDRCAGQNL_					0	0	0		ENST00000467928.2_2_10:102894001-102896667:+|nuORF	ENST00000467928.2_2_10:102894001-102896667:+|nuORF	ENST00000467928.2_2_10:102894001-102896667:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	559.768798828125	2	559.754004	1117.49345	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.776	1	50.752	50.252	51.252	-0.02343								0	0	0	0.45132	1	4414	4414		23.523	0	1				45472	12165	30530	30543	51430	51430					-0.060592355931248676
QNDYLFQL	8	Unmodified	_QNDYLFQL_					0	0	0		ENSG00000081913|ENST00000262719|PHLPP1	ENSG00000081913|ENST00000262719|PHLPP1	ENSG00000081913|ENST00000262719|PHLPP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.7450561523438	2	520.756007	1039.49746	0.71791	0.00037386	-3.5904	-0.0018697	-2.8725	-0.0014959	521.2557456283313	76.36	0.84483	76.76	76.201	77.045	0.3997					24	20	2	0	0	0	0.4196	1	8613	8613		24.203	3.7209	1	110240			45473	1474	30531	30544	51431	51431					-0.020708228277726448
QNEINRLEKQ	10	Unmodified	_QNEINRLEKQ_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.5608215332031	3	424.561597	1270.66296	1.4537	0.00061718	-3.4909	-0.0014821	-2.0372	-0.00086491	424.5601606035987	27.607	1.8639	27.352	26.945	28.809	-0.25465					132	44	5	0	0	0	0.86742	1	1636	1636		27.644	0.89421	1	5946800			45474	5146	30532	30545	51432	51432					0.03845783961082816
QNEVNVSL	8	Unmodified	_QNEVNVSL_					0	0	0			REV__nc|ENSG00000170632|Q8N2F6-6|ARMC10	REV__nc|ENSG00000170632|Q8N2F6-6|ARMC10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7503662109375	2	451.732532	901.45051	-0.14209	-6.4186E-05	-0.52866	-0.00023881	-0.67075	-0.000303	451.7324605955829	33.973	0.54109	33.976	33.748	34.289	0.0026016					17	11	2	0	0	0	0.4196	1	2034	2034		37.159	4.3467	1	27143	+		45475	21679	30533	30546	51433	51433					-0.0041568237888895965
QNEVNVSL	8	Unmodified	_QNEVNVSL_					0	0	0			REV__nc|ENSG00000170632|Q8N2F6-6|ARMC10	REV__nc|ENSG00000170632|Q8N2F6-6|ARMC10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	451.732532	901.45051	0.15138	6.8381E-05	-3.0315	-0.0013694	-2.8801	-0.001301	451.732244566272	34.011	0.3813	33.965	33.728	34.109	-0.045815	-0.049447	-0.0023623	NaN	37.159	19	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47785	+		45476	21679	30533	30546							-0.0041568237888895965
QNEVRQWSGGL	11	Unmodified	_QNEVRQWSGGL_					0	0	0		nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2	nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2	nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	637.3165893554688	2	637.317825	1272.6211	0.57499	0.00036645	-1.8488	-0.0011783	-1.2738	-0.00081184	637.3164436433204	46.873	0.55861	46.869	46.637	47.195	-0.0041618					25	13	3	0	0	0	0.32541	1	3811	3811		68.846	1.8842	1	140870			45477	15282	30534	30547	51434	51434					-0.004307717274514289
QNEVWLLMSGP	11	Unmodified	_QNEVWLLMSGP_					0	0	0			REV__ENST00000475358.1_1_10:95097388-95099921:-|nuORF	REV__ENST00000475358.1_1_10:95097388-95099921:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	637.3177490234375	2	637.315906	1272.61726	-0.81475	-0.00051926	2.4232	0.0015443	1.6084	0.0010251	637.3173989215269	46.688	0.49515	46.688	46.381	46.876	0					21	11	3	0	0	0	0.33597	1	3519	3519		65.157	12.068	1	189020	+		45478	27317	30535	30548	51435	51435					-0.008145775455204785
QNFAKGYEE	9	Unmodified	_QNFAKGYEE_					0	0	0			REV__ENSG00000213967|ENST00000594466|ZNF726	REV__ENSG00000213967|ENST00000594466|ZNF726	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2501220703125	2	543.248546	1084.48254	-0.28393	-0.00015424	4.1086	0.002232	3.8247	0.0020778	543.2502943068316	25.66	0.6839	25.403	24.998	25.682	-0.2572					31	15	3	0	0	0	0.75725	1	1346	1346		36.447	1.2947	1	241570	+		45479	23639	30536	30549	51436	51436					-0.056323146957538484
QNFVKVRNKHK	11	Unmodified	_QNFVKVRNKHK_					0	0	0		nc|ENSG00000164221|Q8NEF3|CCDC112;ENSG00000164221|ENST00000379611|CCDC112	nc|ENSG00000164221|Q8NEF3|CCDC112	nc|ENSG00000164221|Q8NEF3|CCDC112	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.6077880859375	3	466.608993	1396.80515	0.32068	0.00014963	-2.4743	-0.0011545	-2.1536	-0.0010049	466.60769889886956	100.37	2.2833	100.42	99.018	101.3	0.046356					147	53	4	0	0	0	0.75457	1	10676	10676		21.032	2.5012	1	458180			45480	5941	30537	30550	51437	51437					0.12262041493909237
QNFVKVRNKHK	11	Unmodified	_QNFVKVRNKHK_					0	0	0		nc|ENSG00000164221|Q8NEF3|CCDC112;ENSG00000164221|ENST00000379611|CCDC112	nc|ENSG00000164221|Q8NEF3|CCDC112	nc|ENSG00000164221|Q8NEF3|CCDC112	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.6080017089844	3	466.608993	1396.80515	0.76537	0.00035713	-2.8238	-0.0013176	-2.0584	-0.00096048	466.60758822103855	100.27	2.2686	100.42	99.189	101.46	0.15073					150	53	4	0	0	0	0.76892	1	10397	10397		17.833	4.3252	1	578170			45481	5941	30537	30550	51438	51438					0.12262041493909237
QNGLARKL	8	Unmodified	_QNGLARKL_					0	0	0			REV__nc|ENSG00000095951|P15822-3|HIVEP1	REV__nc|ENSG00000095951|P15822-3|HIVEP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2749938964844	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.85277	1	9615	9615		25.45	0	1	41438000	+		45482	29730	30538	30551	51439	51439					0.08152313228504227
QNGLPLIL	8	Unmodified	_QNGLPLIL_					0	0	0			REV__ENSG00000133116|ENST00000380099|KL	REV__ENSG00000133116|ENST00000380099|KL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516784667969	2	434.268553	866.522553	-0.16825	-7.3065E-05	3.0624	0.0013299	2.8941	0.0012568	434.2697987130036	78.472	0.57932	78.528	78.263	78.842	0.056114					27	16	2	0	0	0	0.4196	1	7593	7593		13.775	0	1	66357	+		45483	19060	30539	30552	51440	51440					0.08395276765475046
QNGQKKKKGKK	11	Unmodified	_QNGQKKKKGKK_					0	0	0		ENSG00000170807|ENST00000458573|LMOD2	ENSG00000170807|ENST00000458573|LMOD2	ENSG00000170807|ENST00000458573|LMOD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	636.3983764648438	2	636.398953	1270.78335	-1.1707	-0.00074503	-0.71807	-0.00045698	-1.8888	-0.001202	636.3982870315757	101.45	0.60204	101.6	101.43	102.04	0.15505					31	14	3	0	0	0	0.7434	1	10625	10625		23.523	2.6855	1	219040			45484	6615	30540	30553	51441	51441					0.1587923674535432
QNGRKKRKIPK	11	Unmodified	_QNGRKKRKIPK_					0	0	0		ENSG00000146966|ENST00000496613|DENND2A;nc|ENSG00000146966|Q9ULE3-2|DENND2A	ENSG00000146966|ENST00000496613|DENND2A	ENSG00000146966|ENST00000496613|DENND2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9580383300781	3	451.624755	1351.85244	-1.8035	-0.00081452	1.1089	0.00050082	-0.69461	-0.0003137	451.6251108617355	45.416	1.0919	45.416	44.809	45.901	0					45	26	2	0	0	0	0.75121	1	3323	3323		21.78	6.4473	1	78079			45485	4873	30541	30554	51442	51442					0.19058320764906966
QNGRRKLVLQ	10	Unmodified	_QNGRRKLVLQ_					0	0	0			REV__ENSG00000062582|ENST00000317534|MRPS24	REV__ENSG00000062582|ENST00000317534|MRPS24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	606.3697509765625	2	606.370195	1210.72584	1.0648	0.00064567	-2.2369	-0.0013564	-1.1721	-0.00071071	606.3686977940384	94.008	3.2437	94.236	93.32	96.564	0.22863					196	77	3	0	0	0	0.86763	1	9613	9613		26.693	0.62953	1	863300	+		45486	16463	30542	30555	51443	51443					0.12890394539772387
QNGVHVIL	8	Unmodified	_QNGVHVIL_					0	0	0		ENSG00000184860|ENST00000328945|SDR42E1	ENSG00000184860|ENST00000328945|SDR42E1	ENSG00000184860|ENST00000328945|SDR42E1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.25628662109375	2	440.255977	878.497401	0.10626	4.6782E-05	-1.6749	-0.0007374	-1.5687	-0.00069062	440.25513615369636	77.169	0.87977	77.738	77.379	78.259	0.56835					33	20	2	0	0	0	0.86791	1	8790	8790		28.254	1.4582	1	782430			45487	7646	30543	30556	51444	51444					0.05329221962904285
QNHSAVNRRH	10	Unmodified	_QNHSAVNRRH_					0	0	0		nc|ENSG00000125804|Q5T1J6|FAM182A	nc|ENSG00000125804|Q5T1J6|FAM182A	nc|ENSG00000125804|Q5T1J6|FAM182A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.8785705566406	3	406.878143	1217.6126	-0.40526	-0.00016489	3.0475	0.00124	2.6422	0.0010751	406.8793197462454	18.556	0.75912	18.479	18.264	19.023	-0.07671					46	22	4	0	0	0	0.83456	1	308	308		37.508	2.33	1	489230			45488	14894	30544	30557	51445	51445					0.012497191465854485
QNIVKLFAV	9	Unmodified	_QNIVKLFAV_					0	0	0		ENSG00000263528|ENST00000581977|IKBKE	ENSG00000263528|ENST00000581977|IKBKE	ENSG00000263528|ENST00000581977|IKBKE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.311767578125	2	516.316035	1030.61752	0.81867	0.00042269	-4.2005	-0.0021688	-3.3818	-0.0017461	516.3139586362336	103.31	1.1027	103.44	102.97	104.08	0.12621					71	27	3	0	0	0	0.78058	1	10986	10986		30.504	0	1	1034200			45489	8939	30545	30558	51446	51446					0.10343210236624145
QNIYTDSCSL	10	Unmodified	_QNIYTDSCSL_					0	0	0			REV__ENSG00000186119|ENST00000333976|OR5D18	REV__ENSG00000186119|ENST00000333976|OR5D18	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.2737426757812	2	572.252971	1142.49139	-0.55746	-0.00031901	3.938	0.0022535	3.3806	0.0019345	572.2550797703535	87.202	0.49899	87.657	87.345	87.844	0.45429					19	11	2	0	0	0	0.37624	1	10277	10277		19.997	3.5236	1	213300	+		45490	22824	30546	30559	51447	51447					-0.07415709121596592
QNKAGLFPP	9	Unmodified	_QNKAGLFPP_					0	0	0		ENST00000315150.9_1_3:128806854-128806983:-|nuORF	ENST00000315150.9_1_3:128806854-128806983:-|nuORF	ENST00000315150.9_1_3:128806854-128806983:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.2669677734375	2	486.269084	970.523616	-1.6066	-0.00078124	-2.3049	-0.0011208	-3.9115	-0.0019021	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.72402	1	8387	8387		38.806	9.6361	1	1531500			45491	9968	30547	30560	51448	51448					0.037174911343640815
QNKERKKKIRR	11	Unmodified	_QNKERKKKIRR_					0	0	0			REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.286904904037577|0.1763547852274372|2.87|63.0|5|1|sense	REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.286904904037577|0.1763547852274372|2.87|63.0|5|1|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3277893066406	3	495.31458	1482.92191	0.076854	3.8067E-05	1.8426	0.00091265	1.9194	0.00095072	495.3154164908677	15.497	0.18551	15.555	15.469	15.654	0.057872					11	5	3	0	0	0	0.18209	1	31	31		15.921	2.4127	1	55972	+		45492	29601	30548	30561	51449	51449					0.19976779713670112
QNKERTLL	8	Unmodified	_QNKERTLL_					0	0	0			REV__ENSG00000135837|ENST00000367607|CEP350	REV__ENSG00000135837|ENST00000367607|CEP350	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.29022216796875	2	501.290548	1000.56654	-0.36653	-0.00018374	0.15869	7.9552E-05	-0.20784	-0.00010419	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.87064	1	8873	8873		29.15	0	1	9903700	+		45493	19256	30549	30562	51450	51450					0.06628261191815454
QNKFLRRQ	8	Unmodified	_QNKFLRRQ_					0	0	0		ENST00000474311.1_1_3:112724385-112727343:-|nuORF;ENST00000472637.5_1_3:112724385-112732818:-|nuORF;nc|ENSG00000163608|Q6NW34-2|NEPRO;ENSG00000163608|ENST00000314400|NEPRO	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.31689453125	2	545.317432	1088.62031	-0.68757	-0.00037494	-0.58844	-0.00032088	-1.276	-0.00069583	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.87922	2	8700	8629;8700		33.516	1.9858	1	3608000			45494	5834	30550	30563	51451;51452	51452					0.07954478414194455
QNKFLRRQ	8	Unmodified	_QNKFLRRQ_					0	0	0		ENST00000474311.1_1_3:112724385-112727343:-|nuORF;ENST00000472637.5_1_3:112724385-112732818:-|nuORF;nc|ENSG00000163608|Q6NW34-2|NEPRO;ENSG00000163608|ENST00000314400|NEPRO	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3165283203125	2	545.317432	1088.62031	-0.33932	-0.00018504	-1.0312	-0.00056233	-1.3705	-0.00074737	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.87922	4	8957	8957;9099;9111;9147		31.955	1.6371	1	4710900			45495	5834	30550	30563	51453;51454;51455;51456	51453					0.07954478414194455
QNKFLRRQ	8	Unmodified	_QNKFLRRQ_					0	0	0		ENST00000474311.1_1_3:112724385-112727343:-|nuORF;ENST00000472637.5_1_3:112724385-112732818:-|nuORF;nc|ENSG00000163608|Q6NW34-2|NEPRO;ENSG00000163608|ENST00000314400|NEPRO	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.31689453125	2	545.317432	1088.62031	1.9901	0.0010853	-3.3293	-0.0018155	-1.3392	-0.00073027	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.87922	3	9108	9108;9228;9252		31.955	2.8053	1	4704900			45496	5834	30550	30563	51457;51458;51459	51457					0.07954478414194455
QNKFLRRQ	8	Unmodified	_QNKFLRRQ_					0	0	0		ENST00000474311.1_1_3:112724385-112727343:-|nuORF;ENST00000472637.5_1_3:112724385-112732818:-|nuORF;nc|ENSG00000163608|Q6NW34-2|NEPRO;ENSG00000163608|ENST00000314400|NEPRO	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3172607421875	2	545.317432	1088.62031	1.1684	0.00063715	-2.5262	-0.0013776	-1.3578	-0.00074041	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.87922	1	8971	8971		31.955	2.7848	1	4705800			45497	5834	30550	30563	51460	51460					0.07954478414194455
QNKFLRRQ	8	Unmodified	_QNKFLRRQ_					0	0	0		ENST00000474311.1_1_3:112724385-112727343:-|nuORF;ENST00000472637.5_1_3:112724385-112732818:-|nuORF;nc|ENSG00000163608|Q6NW34-2|NEPRO;ENSG00000163608|ENST00000314400|NEPRO	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167724609375	2	545.317432	1088.62031	0.15103	8.2357E-05	-1.6523	-0.00090103	-1.5013	-0.00081867	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.89962	1	8711	8711		38.806	7.2763	1	5755000			45498	5834	30550	30563	51461	51461					0.07954478414194455
QNKFLRRQ	8	Unmodified	_QNKFLRRQ_					0	0	0		ENST00000474311.1_1_3:112724385-112727343:-|nuORF;ENST00000472637.5_1_3:112724385-112732818:-|nuORF;nc|ENSG00000163608|Q6NW34-2|NEPRO;ENSG00000163608|ENST00000314400|NEPRO	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3169555664062	2	545.317432	1088.62031	0.15577	8.4944E-05	-1.2744	-0.00069494	-1.1186	-0.00060999	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.92457	1	9475	9475		47.916	5.5195	1	17220000			45499	5834	30550	30563	51462	51462					0.07954478414194455
QNKFLRRQ	8	Unmodified	_QNKFLRRQ_					0	0	0		ENST00000474311.1_1_3:112724385-112727343:-|nuORF;ENST00000472637.5_1_3:112724385-112732818:-|nuORF;nc|ENSG00000163608|Q6NW34-2|NEPRO;ENSG00000163608|ENST00000314400|NEPRO	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	ENST00000474311.1_1_3:112724385-112727343:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3165893554688	2	545.317432	1088.62031	-1.4651	-0.00079892	0.057523	3.1368E-05	-1.4075	-0.00076755	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.87479	2	8675	8675;8688		31.955	1.4512	1	4998200			45500	5834	30550	30563	51463;51464	51463					0.07954478414194455
QNKFSILENAQ	11	Unmodified	_QNKFSILENAQ_					0	0	0			REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	646.3358154296875	2	646.335684	1290.65681	0.91101	0.00058882	-1.1069	-0.00071542	-0.19587	-0.0001266	646.3349429242918	52.327	0.82375	52.339	51.925	52.748	0.012436					41	18	3	0	0	0	0.69248	1	4588	4588		32.751	0	1	579770	+		45501	30240	30551	30564	51465	51465					0.02311265729599654
QNKIKMQG	8	Unmodified	_QNKIKMQG_					0	0	0			REV__ENSG00000187715|ENST00000405109|KBTBD12	REV__ENSG00000187715|ENST00000405109|KBTBD12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.7597351074219	2	473.760569	945.506586	0.75968	0.0003599	-3.1118	-0.0014742	-2.3521	-0.0011143	473.7590702725791	22.845	0.86935	22.905	22.46	23.329	0.060431					38	32	2	0	0	0	0.86288	1	726	726		26.796	1.222	1	28931	+		45502	22937	30552	30565	51466	51466					0.03165247256924886
QNKKIKDKHL	10	Unmodified	_QNKKIKDKHL_					0	0	0		ENSG00000081386|ENST00000223428|ZNF510	ENSG00000081386|ENST00000223428|ZNF510	ENSG00000081386|ENST00000223428|ZNF510	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.9223937988281	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.85466	1	11585	11585		20.03	0	1	19495000			45503	1465	30553	30566	51467	51467					0.13056145479754377
QNKKKLAN	8	Unmodified	_QNKKKLAN_					0	0	0			REV__nc|ENSG00000116731|Q13029-5|PRDM2	REV__nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2876892089844	2	472.287808	942.561064	-0.91361	-0.00043149	1.3293	0.00062781	0.41567	0.00019632	472.2883987984471	99.414	1.6316	99.414	99.097	100.73	0					84	38	3	0	0	0	0.84341	1	10070	10070		24.203	3.7209	1	360760	+		45504	18220	30554	30567	51468	51468					0.08748582399982752
QNKKKLAN	8	Unmodified	_QNKKKLAN_					0	0	0			REV__nc|ENSG00000116731|Q13029-5|PRDM2	REV__nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2874755859375	2	472.287808	942.561064	-0.108	-5.1006E-05	-0.19809	-9.3555E-05	-0.30609	-0.00014456	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.87922	2	10011	10011;10277		45.952	1.8352	1	46909000	+		45505	18220	30554	30567	51469;51470	51469					0.08748582399982752
QNKKKLAN	8	Unmodified	_QNKKKLAN_					0	0	0			REV__nc|ENSG00000116731|Q13029-5|PRDM2	REV__nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2875671386719	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.87479	1	9805	9805		30.504	1.3541	1	48696000	+		45506	18220	30554	30567	51471	51471					0.08748582399982752
QNKKKLAN	8	Unmodified	_QNKKKLAN_					0	0	0			REV__nc|ENSG00000116731|Q13029-5|PRDM2	REV__nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2862548828125	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.85277	3	12741	12144;12546;12741		40.573	3.4135	1	3080300	+		45507	18220	30554	30567	51472;51473;51474	51474					0.08748582399982752
QNKKKLAN	8	Unmodified	_QNKKKLAN_					0	0	0			REV__nc|ENSG00000116731|Q13029-5|PRDM2	REV__nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2873840332031	2	472.287808	942.561064	2.1484	0.0010146	-2.0454	-0.000966	0.103	4.8644E-05	472.28673091824714	113.99	1.2395	114.01	113.14	114.38	0.020027					83	56	2	0	0	0	0.90465	1	13746	13746		40.573	7.057	1	98727	+		45508	18220	30554	30567	51475	51475					0.08748582399982752
QNKKRVLL	8	Unmodified	_QNKKRVLL_					0	0	0		ENSG00000142534|ENST00000270625|RPS11;ENST00000599167.5_1_19:49999677-50000690:+|nuORF;ENST00000600027.5_1_19:49999677-50000944:+|nuORF	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	499.8273010253906	2	499.827101	997.639649	-0.56686	-0.00028333	0.5112	0.00025551	-0.055662	-2.7821E-05	499.8272182273713	19.855	0.40326	19.785	19.657	20.06	-0.070013					33	17	3	0	0	0	0.81548	2	464	464;469		20.482	0	1	72411			45509	4568	30555	30568	51476;51477	51476					0.14073434705096588
QNKKVVKEQI	10	Unmodified	_QNKKVVKEQI_					0	0	0			REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3	REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.2466735839844	3	405.24695	1212.71902	1.65	0.00066868	-1.1207	-0.00045416	0.52934	0.00021451	405.24639893952656	23.489	3.066	23.108	22.404	25.47	-0.38178					149	70	4	0	0	0	0.36572	1	1037	1037		66.962	10.33	1	247320	+		45510	19567	30556	30569	51478	51478					0.12117036868562536
QNKRLLKRF	9	Unmodified	_QNKRLLKRF_					0	0	0			REV__ENST00000271375.6_1_1:168215690-168215831:+|nuORF	REV__ENST00000271375.6_1_1:168215690-168215831:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2523193359375	3	401.58753	1201.74076	2.0638	0.00082879	-1.8881	-0.00075822	0.17572	7.0566E-05	401.58657694638543	21.775	0.38688	21.332	21.107	21.494	-0.44324					13	8	2	0	0	0	0.20789	1	817	817		13.454	0	1	38698	+		45511	24534	30557	30570	51479	51479					0.14795886407796388
QNKRVPAP	8	Unmodified	_QNKRVPAP_					0	0	0			REV__ENSG00000106125|ENST00000265299|MINDY4	REV__ENSG00000106125|ENST00000265299|MINDY4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.96551513671875	2	455.266876	908.519199	0.23799	0.00010835	-3.7036	-0.0016861	-3.4656	-0.0015778	455.26510994735673	41.2	0.38649	41.169	40.993	41.38	-0.030991					14	10	2	0	0	0	0.4196	1	3004	3004		18.324	5.3652	1	84542	+		45512	17599	30558	30571	51480	51480					0.06128026711462553
QNKRVPAP	8	Unmodified	_QNKRVPAP_					0	0	0			REV__ENSG00000106125|ENST00000265299|MINDY4	REV__ENSG00000106125|ENST00000265299|MINDY4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	455.266876	908.519199	-0.093802	-4.2705E-05	0.60674	0.00027623	0.51294	0.00023352	455.2674686078643	41.136	0.11761	41.09	41.025	41.143	-0.045471	0.064544	0.0026528	NaN	18.324	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45382	+		45513	17599	30558	30571							0.06128026711462553
QNKSGNQILV	10	Unmodified	_QNKSGNQILV_					0	0	0			REV__ENSG00000051341|ENST00000264233|POLQ	REV__ENSG00000051341|ENST00000264233|POLQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.806640625	2	550.806562	1099.59857	-0.24393	-0.00013436	0.40086	0.0002208	0.15693	8.6439E-05	550.8066637941864	29.97	0.60428	29.995	29.733	30.337	0.025013					23	14	2	0	0	0	0.86106	1	1518	1518		33.922	4.0801	1	101140	+		45514	16382	30559	30572	51481	51481					0.052756288749378655
QNKSGNQILV	10	Unmodified	_QNKSGNQILV_					0	0	0			REV__ENSG00000051341|ENST00000264233|POLQ	REV__ENSG00000051341|ENST00000264233|POLQ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8060913085938	2	550.806562	1099.59857	0.24565	0.0001353	-0.041853	-2.3053E-05	0.2038	0.00011225	550.8063464981013	29.888	1.5118	29.799	29.104	30.616	-0.089546					94	34	5	0	0	0	0.70553	1	1947	1947		44.377	0.26039	1	1346500	+		45515	16382	30559	30572	51482	51482					0.052756288749378655
QNKSTRIFK	9	Unmodified	_QNKSTRIFK_					0	0	0		ENST00000448223.6_1_2:17899438-17902280:-|nuORF	ENST00000448223.6_1_2:17899438-17902280:-|nuORF	ENST00000448223.6_1_2:17899438-17902280:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3271484375	2	561.324922	1120.63529	-0.26757	-0.00015019	3.8009	0.0021335	3.5333	0.0019833	561.3268339242239	62.486	1.1714	62.874	62.403	63.575	0.38779					62	26	3	0	0	0	0.36616	2	6719	6689;6719		60.118	1.5129	1	463100			45516	11856	30560	30573	51483;51484	51484					0.07979925491508766
QNKSTRIFK	9	Unmodified	_QNKSTRIFK_					0	0	0		ENST00000448223.6_1_2:17899438-17902280:-|nuORF	ENST00000448223.6_1_2:17899438-17902280:-|nuORF	ENST00000448223.6_1_2:17899438-17902280:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.32666015625	2	561.324922	1120.63529	0.24003	0.00013474	3.308	0.0018569	3.5481	0.0019916	561.3265230170197	62.343	1.1256	62.897	62.343	63.469	0.55449					62	25	3	0	0	0	0.33718	1	6695	6695		62.107	5.3864	1	488150			45517	11856	30560	30573	51485	51485					0.07979925491508766
QNKTIKKTG	9	Unmodified	_QNKTIKKTG_					0	0	0			REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|143|3|sense	REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|143|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.3056640625	2	509.306198	1016.59784	-0.80877	-0.00041191	0.15942	8.1194E-05	-0.64935	-0.00033072	509.30614096875837	93.406	1.6722	93.406	92.938	94.61	0					114	38	4	0	0	0	0.78983	1	9218	9218		27.882	0	1	1703100	+		45518	29483	30561	30574	51486	51486					0.09020834225907493
QNKTIKKTG	9	Unmodified	_QNKTIKKTG_					0	0	0			REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|143|3|sense	REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|143|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.305908203125	2	509.306198	1016.59784	-1.5847	-0.00080708	0.89267	0.00045464	-0.692	-0.00035244	509.30651405671495	92.924	1.4274	93.116	92.648	94.076	0.19238					107	33	5	0	0	0	0.71772	1	9354	9354		39.253	0	1	2014700	+		45519	29483	30561	30574	51487	51487					0.09020834225907493
QNLEGSEHGAI	11	Unmodified	_QNLEGSEHGAI_					0	0	0			REV__ENSG00000084623|ENST00000677711|EIF3I	REV__ENSG00000084623|ENST00000677711|EIF3I	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.2750244140625	2	577.775459	1153.53637	-0.56409	-0.00032592	4.2267	0.0024421	3.6626	0.0021162	577.7777107594777	76.339	0.53358	76.738	76.491	77.025	0.3997					26	12	3	0	0	0	0.62614	1	8668	8668		41.427	3.6151	1	310770	+		45520	16875	30562	30575	51488	51488					-0.0342614226403839
QNLLDKAFE	9	Unmodified	_QNLLDKAFE_					0	0	0		ENSG00000133687|ENST00000539277|TMTC1;nc|ENSG00000133687|Q8IUR5-2|TMTC1;nc|ENSG00000133687|Q8IUR5-1|TMTC1;nc|ENSG00000133687|Q8IUR5-4|TMTC1	ENSG00000133687|ENST00000539277|TMTC1	ENSG00000133687|ENST00000539277|TMTC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.2835083007812	2	539.282389	1076.55022	-1.3286	-0.00071648	1.3012	0.00070169	-0.02742	-1.4787E-05	539.2828341074548	58.89	0.83183	59.282	58.736	59.568	0.39209					32	19	2	0	0	0	0.41566	1	6159	6159		56.721	3.3696	1	737190			45521	3888	30563	30576	51489	51489					0.01501135235048423
QNLLKKTK	8	Unmodified	_QNLLKKTK_					0	0	0		ENST00000438666.6_1_13:36886473-36886551:-|nuORF	ENST00000438666.6_1_13:36886473-36886551:-|nuORF	ENST00000438666.6_1_13:36886473-36886551:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.8126525878906	2	486.813659	971.612765	0.56917	0.00027708	-0.99852	-0.00048609	-0.42935	-0.00020901	486.8131194278926	32.26	1.0233	32.367	32.016	33.04	0.10707					72	23	5	0	0	0	0.90837	1	2295	2295		56.721	0	1	4982000			45522	11755	30564	30577	51490	51490					0.12582326093900065
QNLLRLLRKA	10	Unmodified	_QNLLRLLRKA_					0	0	0		ENSG00000137225|ENST00000398776|CAPN11	ENSG00000137225|ENST00000398776|CAPN11	ENSG00000137225|ENST00000398776|CAPN11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9333190917969	3	408.934818	1223.78262	0.46238	0.00018908	-2.5602	-0.001047	-2.0978	-0.00085788	408.9337641207	16.291	0.68274	16.267	16.091	16.773	-0.024035					86	29	4	0	0	0	0.86551	1	161	161		14.694	2.2608	1	1069300			45523	4183	30565	30578	51491	51491					0.17968442096298531
QNLPAVPIH	9	Unmodified	_QNLPAVPIH_					0	0	0		nc|ENSG00000240021|Q5T0J7-5|TEX35	nc|ENSG00000240021|Q5T0J7-5|TEX35	nc|ENSG00000240021|Q5T0J7-5|TEX35	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.68756103515625	2	494.782359	987.550165	-0.3637	-0.00017995	-3.733	-0.001847	-4.0967	-0.002027	494.78036117734723	86.114	3.3197	86.558	85.468	88.787	0.44331					170	80	3	0	0	0	0.20789	1	10389	10389		25.45	6.3466	1	514260			45524	15278	30566	30579	51492	51492					0.05589180025708629
QNLQRELLL	9	Unmodified	_QNLQRELLL_					0	0	0		ENST00000297071.8_1_7:23561410-23571439:-|nuORF	ENST00000297071.8_1_7:23561410-23571439:-|nuORF	ENST00000297071.8_1_7:23561410-23571439:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.832275390625	2	563.83258	1125.65061	0.5245	0.00029573	-0.43318	-0.00024424	0.091322	5.149E-05	563.8322356707472	22.223	0.74319	21.612	21.332	22.076	-0.6107					51	18	4	0	0	0	0.55097	1	866	866		49.442	3.4693	1	883290			45525	9754	30567	30580	51493	51493					0.09280792288700468
QNLRDQLITVI	11	Unmodified	_QNLRDQLITVI_					0	0	0			REV__ENSG00000094804|ENST00000209728|CDC6	REV__ENSG00000094804|ENST00000209728|CDC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2578430175781	3	438.257626	1311.75105	0.21129	9.2599E-05	0.10345	4.5337E-05	0.31474	0.00013794	438.2576083423229	29.948	1.2574	29.973	29.652	30.909	0.025013					91	35	4	0	0	0	0.67762	1	1520	1520		35.178	4.6094	1	433100	+		45526	17045	30568	30581	51494	51494					0.10764404551696316
QNLRTKWKK	9	Unmodified	_QNLRTKWKK_					0	0	0			REV__nc|ENSG00000158488|P15812-8|CD1E	REV__nc|ENSG00000158488|P15812-8|CD1E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.2452697753906	3	401.243652	1200.70913	-0.1653	-6.6325E-05	3.4604	0.0013884	3.2951	0.0013221	401.2449412226133	21.064	0.80942	20.436	20.077	20.887	-0.62835					49	20	3	0	0	0	0.77244	1	749	749		32.812	0.061884	1	634220	+		45527	20610	30569	30582	51495	51495					0.11679893653808904
QNLSVNPK	8	Unmodified	_QNLSVNPK_					0	0	0		ENST00000597301.5_1_19:14828435-14828537:+|nuORF;ENST00000540689.6_1_19:14827826-14828537:+|nuORF	ENST00000597301.5_1_19:14828435-14828537:+|nuORF	ENST00000597301.5_1_19:14828435-14828537:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2510681152344	2	450.250892	898.48723	0.38762	0.00017452	-0.21944	-9.8803E-05	0.16818	7.5721E-05	450.25063616936995	31.332	0.77067	31.335	30.971	31.742	0.0037212					45	17	5	0	0	0	0.48059	1	2120	2120		76.774	2.5191	1	1483200			45528	13504	30570	30583	51496	51496					0.03392614237657199
QNLVQPIQE	9	Unmodified	_QNLVQPIQE_					0	0	0			REV__ENSG00000205339|ENST00000379719|IPO7	REV__ENSG00000205339|ENST00000379719|IPO7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.787841796875	2	534.787838	1067.56112	-0.69596	-0.00037219	0.59964	0.00032068	-0.096316	-5.1509E-05	534.7880464305689	28.901	0.77129	28.872	28.443	29.214	-0.029207					39	17	3	0	0	0	0.33718	1	1773	1773		62.107	1.1355	1	533830	+		45529	23555	30571	30584	51497	51497					0.030045376093539744
QNMAWSKPRND	11	Unmodified	_QNMAWSKPRND_					0	0	0		chr10:45982925-45985383|14|13.5|0.43|4.97|+|0|None,TIMM23|1	chr10:45982925-45985383|14|13.5|0.43|4.97|+|0|None,TIMM23|1	chr10:45982925-45985383|14|13.5|0.43|4.97|+|0|None,TIMM23|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2633056640625	3	449.547182	1345.61972	0.45323	0.00020375	-1.2337	-0.00055459	-0.78043	-0.00035084	449.54642187185203	29.742	0.51297	29.652	29.404	29.917	-0.089544					16	11	2	0	0	0	0.17437	1	1918	1918		32.034	2.4834	1	51854			45530	73	30572	30585	51498	51498					-0.039267290878342465
QNNLLTNSL	9	Unmodified	_QNNLLTNSL_					0	0	0			REV__chr10:31461237-31466427|51|26.02|0.27|6.61|+|1|TE_info:L1M2,L1M2_dup6175,L1,LINE,acceptor,+,31466427,31466916|ZEB1,None|4	REV__chr10:31461237-31466427|51|26.02|0.27|6.61|+|1|TE_info:L1M2,L1M2_dup6175,L1,LINE,acceptor,+,31466427,31466916|ZEB1,None|4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7700500488281	2	508.772188	1015.52982	0.077994	3.9681E-05	-0.27284	-0.00013881	-0.19485	-9.9133E-05	508.7720010142823	49.67	0.73777	50.13	49.789	50.527	0.45983					39	17	3	0	0	0	0.12688	1	4842	4842		87.696	13.441	1	1760400	+		45531	15474	30573	30586	51499	51499					0.02267964575219139
QNNSDAVVI	9	Unmodified	_QNNSDAVVI_					0	0	0			REV__nc|ENSG00000110171|O75382-4|TRIM3	REV__nc|ENSG00000110171|O75382-4|TRIM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.2408752441406	2	480.243264	958.471974	-1.5873	-0.00076229	1.5949	0.00076594	0.0076101	3.6547E-06	480.243773059925	32.707	1.1523	32.706	32.292	33.444	-0.0016365					48	27	3	0	0	0	0.58668	1	1861	1861		47.657	0	1	175860	+		45532	17801	30574	30587	51500	51500					-0.008922973501853448
QNNSPQLNN	9	Unmodified	_QNNSPQLNN_					0	0	0		ENST00000508571.6_1_5:109668587-109961153:-|nuORF;ENST00000515518.6_1_5:109760554-109978041:-|nuORF;nc|ENSG00000186952|C9JQI7-2|TMEM232;ENSG00000186952|ENST00000455884|TMEM232;ENST00000512003.7_1_5:109946270-109963572:-|nuORF	ENST00000508571.6_1_5:109668587-109961153:-|nuORF	ENST00000508571.6_1_5:109668587-109961153:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8087158203125	2	514.741419	1027.46829	0.36039	0.00018551	-3.886	-0.0020003	-3.5256	-0.0018148	514.7390924865908	50.14	0.51327	50.183	49.888	50.401	0.04224					21	12	2	0	0	0	0.20789	1	3893	3893		22.58	10.373	1	165380			45533	7831	30575	30588	51501	51501					-0.04434967124052491
QNNTLVLKQLD	11	Unmodified	_QNNTLVLKQLD_					0	0	0			REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3710327148438	2	643.359159	1284.70376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.95	1	114.92	114.42	115.42	-0.02433								0	0	0	0.56276	1	12738	12738		36.318	4.7878	1		+		45534	17693	30576	30589	51502	51502					0.07280125280703942
QNNTQQKY	8	Unmodified	_QNNTQQKY_					0	0	0			REV__ENSG00000155659|ENST00000374737|VSIG4	REV__ENSG00000155659|ENST00000374737|VSIG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2471313476562	2	512.246338	1022.47812	-0.57502	-0.00029455	3.1971	0.0016377	2.6221	0.0013431	512.2482070561316	46.636	0.62689	46.607	46.355	46.981	-0.028782					24	14	3	0	0	0	0.88944	1	3868	3868		57.811	2.3071	1	202660	+		45535	20438	30577	30590	51503	51503					-0.03221779118678114
QNPEPPVDF	9	Unmodified	_QNPEPPVDF_					0	0	0		nc|ENSG00000212643|Q15695|ZRSR2P1;ENSG00000169249|ENST00000307771|ZRSR2	nc|ENSG00000212643|Q15695|ZRSR2P1	nc|ENSG00000212643|Q15695|ZRSR2P1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.991943359375	2	521.745639	1041.47673	0.26327	0.00013736	0.1131	5.901E-05	0.37638	0.00019637	521.7455081460107	52.137	0.49056	52.805	52.637	53.127	0.66729					17	11	2	0	0	0	0.20789	1	5240	5240		21.96	7.095	1	496510			45536	6482	30578	30591	51504	51504					-0.04235413207447891
QNPGHCPLA	9	Unmodified	_QNPGHCPLA_					0	0	0		nc|ENSG00000170379|A6NFQ2-3|TCAF2;ENSG00000283528|ENST00000636941|TCAF2C;nc|ENSG00000170379|A6NFQ2-2|TCAF2;ENSG00000170379|ENST00000684770|TCAF2	nc|ENSG00000170379|A6NFQ2-3|TCAF2	nc|ENSG00000170379|A6NFQ2-3|TCAF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.722900390625	2	468.721444	935.428335	1.0684	0.00050079	3.5114	0.0016459	4.5798	0.0021467	468.7229595267066	94.221	0.99142	94.654	94.37	95.361	0.4324					49	25	3	0	0	0	0.77546	1	11256	11256		31.955	5.1588	1	660150			45537	15088	30579	30592	51505	51505					-0.04196185328339652
QNPIASELS	9	Unmodified	_QNPIASELS_					0	0	0			REV__nc|ENSG00000211750|A0A075B6N3|TRBV24-1	REV__nc|ENSG00000211750|A0A075B6N3|TRBV24-1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.5705871582031	2	479.745639	957.476725	-1.3493	-0.00064731	-0.69397	-0.00033293	-2.0432	-0.00098024	479.7446298596587	67.113	0.12723	67.113	67.089	67.216	0					8	6	2	0	0	0	0.20789	1	5938	5938		16.473	0	1	58576	+		45538	30184	30580	30593	51506	51506					-0.0037141320741511663
QNPLAGASLL	10	Unmodified	_QNPLAGASLL_					0	0	0			REV__nc|ENSG00000239388|A6NK59-2|ASB14	REV__nc|ENSG00000239388|A6NK59-2|ASB14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.2796936035156	2	492.279649	982.544745	-0.23302	-0.00011471	0.43605	0.00021466	0.20302	9.9943E-05	492.27983484983844	26.363	0.57969	26.325	26.096	26.676	-0.038525					21	11	3	0	0	0	0.4892	1	1190	1190		56.721	1.2168	1	47661	+		45539	23803	30581	30594	51507	51507					0.05277456443241135
QNPLAGASLL	10	Unmodified	_QNPLAGASLL_					0	0	0			REV__nc|ENSG00000239388|A6NK59-2|ASB14	REV__nc|ENSG00000239388|A6NK59-2|ASB14	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	492.279649	982.544745	-0.23302	-0.00011471	0.43605	0.00021466	0.20302	9.9943E-05	492.27983484983844	26.363	0.57969	26.325	26.096	26.676	-0.038525	-0.052283	-1.7318E-05	NaN	56.721	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47661	+		45540	23803	30581	30594							0.05277456443241135
QNPLAGASLL	10	Unmodified	_QNPLAGASLL_					0	0	0			REV__nc|ENSG00000239388|A6NK59-2|ASB14	REV__nc|ENSG00000239388|A6NK59-2|ASB14	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	492.279649	982.544745	-1.2168	-0.00059902	1.544	0.00076009	0.32719	0.00016107	492.280280433145	26.498	0.59713	26.465	26.1	26.697	-0.032125	0.088639	0.0010735	NaN	56.721	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40689	+		45541	23803	30581	30594							0.05277456443241135
QNPLSAGL	8	Unmodified	_QNPLSAGL_					0	0	0		ENSG00000175203|ENST00000548249|DCTN2;nc|ENSG00000175203|Q13561-3|DCTN2;nc|ENSG00000175203|Q13561-2|DCTN2	ENSG00000175203|ENST00000548249|DCTN2	ENSG00000175203|ENST00000548249|DCTN2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.2095642089844	2	400.21906	798.423567	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.531	1	22.473	21.973	22.973	-0.05867								0	0	0	0.28057	1	729	729		55.504	2.1528	1				45542	6996	30582	30595	51508	51508					0.01629253800558672
QNPSPPKP	8	Unmodified	_QNPSPPKP_					0	0	0		ENST00000601476.1_1_19:42462288-42463399:-|nuORF	ENST00000601476.1_1_19:42462288-42463399:-|nuORF	ENST00000601476.1_1_19:42462288-42463399:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.24566650390625	2	432.732335	863.450116	2.2648	0.00098007	-3.4729	-0.0015029	-1.2081	-0.00052278	432.7308275997824	98.233	1.1369	98.179	97.73	98.867	-0.054817					46	25	2	0	0	0	0.4196	1	10596	10596		5.9211	0	1	71715			45543	14391	30583	30596	51509	51509					0.012929426918958598
QNQAKLVVA	9	Unmodified	_QNQAKLVVA_					0	0	0		ENSG00000109805|ENST00000251496|NCAPG;ENST00000513226.1_1_4:17812700-17814869:+|nuORF	ENSG00000109805|ENST00000251496|NCAPG	ENSG00000109805|ENST00000251496|NCAPG	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.7868347167969	2	485.787641	969.56073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.919	1	15.979	15.479	16.479	0.059268								0	0	0	0.30416	1	92	92		29.15	8.2026	1				45544	2487	30584	30597	51510	51510					0.07473162680139467
QNQEGFAI	8	Unmodified	_QNQEGFAI_					0	0	0		nc|ENSG00000228741|Q96N96-5|SPATA13;nc|ENSG00000228741|Q96N96-2|SPATA13;nc|ENSG00000228741|Q96N96-3|SPATA13;nc|ENSG00000228741|Q96N96-4|SPATA13;nc|ENSG00000228741|Q96N96|SPATA13;ENSG00000182957|ENST00000382108|SPATA13	nc|ENSG00000228741|Q96N96-5|SPATA13	nc|ENSG00000228741|Q96N96-5|SPATA13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7195129394531	2	453.719424	905.424296	0.8235	0.00037364	0.30671	0.00013916	1.1302	0.0005128	453.7194513691515	32.7	0.63437	32.911	32.636	33.271	0.21168					33	14	3	0	0	0	0.60155	1	2327	2327		71.378	8.0716	1	537980			45545	7487	30585	30598	51511	51511					-0.032199515503748444
QNQLLKRQAAL	11	Unmodified	_QNQLLKRQAAL_					0	0	0		ENSG00000133812|ENST00000256190|SBF2	ENSG00000133812|ENST00000256190|SBF2	ENSG00000133812|ENST00000256190|SBF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8821411132812	2	641.883136	1281.75172	0.91411	0.00058675	-1.9967	-0.0012817	-1.0826	-0.00069492	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.65746	1	10016	10016		37.812	3.639	1	4136300			45546	3895	30586	30599	51512	51512					0.12211243991418996
QNQLLVDELSQ	11	Unmodified	_QNQLLVDELSQ_					0	0	0		ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	ENSG00000155980|ENST00000455537|KIF5A	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.8316650390625	2	643.832974	1285.6514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.18	1	51.18	50.68	51.68	0								0	0	0	0.56276	1	4131	4131		29.17	0	1				45547	5356	30587	30600	51513	51513					0.01999542147086686
QNQLVPEEV	9	Unmodified	_QNQLVPEEV_					0	0	0			REV__ENSG00000157985|ENST00000304032|AGAP1	REV__ENSG00000157985|ENST00000304032|AGAP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.6577758789062	2	528.272021	1054.52949	0.35043	0.00018512	2.629	0.0013888	2.9794	0.0015739	528.272782159871	26.847	0.17974	26.672	26.568	26.748	-0.17559					5	3	2	0	0	0	0.20789	1	1508	1508		32.812	17.479	1	20525	+		45548	20575	30588	30601	51514	51514					0.004405448553598035
QNQMLLKRK	9	Unmodified	_QNQMLLKRK_					0	0	0			REV__nc|ENSG00000148153|Q9NRY2-2|INIP	REV__nc|ENSG00000148153|Q9NRY2-2|INIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	579.8446655273438	2	579.842425	1157.6703	0.88069	0.00051066	1.9179	0.0011121	2.7986	0.0016227	579.843435527032	102.18	1.0887	102.31	101.93	103.02	0.13523					81	26	4	0	0	0	0.7932	1	10832	10832		23.042	3.0457	1	2076300	+		45549	20099	30589	30602	51515	51515					0.09776845027818126
QNQMNQLL	8	Unmodified	_QNQMNQLL_					0	0	0			REV__ENSG00000180016|ENST00000322608|OR1E1	REV__ENSG00000180016|ENST00000322608|OR1E1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	495.28277587890625	2	494.747659	987.480765	-0.63435	-0.00031384	1.787	0.00088412	1.1527	0.00057027	494.74821394086774	68.43	0.45996	68.565	68.45	68.91	0.13522					27	17	2	0	0	0	0.4196	1	6178	6178		25.45	0	1	77151	+		45550	18746	30590	30603	51516	51516					-0.013476469853458184
QNQQALDEV	9	Unmodified	_QNQQALDEV_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.797607421875	2	522.751453	1043.48835	0.53869	0.0002816	-0.87648	-0.00045818	-0.33778	-0.00017658	522.7509915650155	32.616	0.47147	32.742	32.546	33.018	0.12643					16	10	2	0	0	0	0.20789	1	2290	2290		34.173	11.13	1	266070	+		45551	22445	30591	30604	51517	51517					-0.03165216184106612
QNREKRFTFVL	11	Unmodified	_QNREKRFTFVL_					0	0	0		ENSG00000150594|ENST00000280155|ADRA2A	ENSG00000150594|ENST00000280155|ADRA2A	ENSG00000150594|ENST00000280155|ADRA2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.273193359375	3	479.936887	1436.78883	1.0287	0.00049372	3.6317	0.001743	4.6604	0.0022367	480.27304456191104	15.995	0.21398	15.508	15.436	15.65	-0.48718					9	4	3	0	0	0	0.69931	1	77	77		31.634	14.468	1	64316			45552	5074	30592	30605	51518	51518					0.0879091553717899
QNRFFEVL	8	Unmodified	_QNRFFEVL_					0	0	0			REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.7799682617188	2	526.779816	1051.54508	-1.1643	-0.00061331	1.2696	0.00066882	0.10537	5.5508E-05	526.7803385360115	62.777	0.9392	62.777	62.472	63.411	0					104	43	3	0	0	0	0.67263	3	5485	5477;5485;5491		68.485	0	1	461120	+		45553	25998	30593	30606	51519;51520;51521	51520					0.021368761630810695
QNRFFEVL	8	Unmodified	_QNRFFEVL_					0	0	0			REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.780029296875	2	526.779816	1051.54508	-0.039773	-2.0952E-05	0.073955	3.8958E-05	0.034182	1.8007E-05	526.7796901586527	62.695	1.081	62.69	62.4	63.481	-0.0055504					101	51	3	0	0	0	0.67263	2	5829	5808;5829		68.485	0	1	675050	+		45554	25998	30593	30606	51522;51523	51523					0.021368761630810695
QNRFFEVL	8	Unmodified	_QNRFFEVL_					0	0	0			REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.7799682617188	2	526.779816	1051.54508	0.4298	0.00022641	-0.29601	-0.00015593	0.13379	7.0476E-05	526.7794673445285	62.586	1.6533	62.553	62.242	63.895	-0.03371					150	73	4	0	0	0	0.73851	4	5927	5921;5927;5936;5947		65.803	0	1	712450	+		45555	25998	30593	30606	51524;51525;51526;51527	51525					0.021368761630810695
QNRFFEVL	8	Unmodified	_QNRFFEVL_					0	0	0			REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.7802734375	2	526.779816	1051.54508	-0.45265	-0.00023845	0.6383	0.00033624	0.18565	9.7797E-05	526.779998742406	62.534	1.519	62.562	62.243	63.762	0.028133					119	70	3	0	0	0	0.67263	2	5837	5837;5871		68.485	0	1	655170	+		45556	25998	30593	30606	51528;51529	51528					0.021368761630810695
QNRFFEVL	8	Unmodified	_QNRFFEVL_					0	0	0			REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.7803344726562	2	526.779816	1051.54508	-0.17134	-9.0257E-05	0.33557	0.00017677	0.16423	8.6514E-05	526.7798231618902	62.475	0.84435	62.589	62.338	63.183	0.11388					86	41	3	0	0	0	0.73851	2	5455	5455;5468		65.803	0	1	599530	+		45557	25998	30593	30606	51530;51531	51530					0.021368761630810695
QNRFFEVL	8	Unmodified	_QNRFFEVL_					0	0	0			REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.7803955078125	2	526.779816	1051.54508	0.48376	0.00025483	-0.28147	-0.00014827	0.20229	0.00010656	526.7794867271836	62.521	0.96588	62.642	62.272	63.238	0.1209					100	46	3	0	0	0	0.73851	1	5459	5459		65.803	0	1	677390	+		45558	25998	30593	30606	51532	51532					0.021368761630810695
QNRFFEVL	8	Unmodified	_QNRFFEVL_					0	0	0			REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	REV__ENST00000389622.6_1_3:97596741-97596864:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.7802734375	2	526.779816	1051.54508	-0.6273	-0.00033045	0.7852	0.00041363	0.1579	8.3178E-05	526.7800704110876	62.601	0.89739	62.624	62.313	63.21	0.022984					97	40	3	0	0	0	0.67263	2	5467	5461;5467		68.485	0	1	577420	+		45559	25998	30593	30606	51533;51534	51534					0.021368761630810695
QNRLDELTN	9	Unmodified	_QNRLDELTN_					0	0	0			REV__ENSG00000054654|ENST00000555002|SYNE2	REV__ENSG00000054654|ENST00000555002|SYNE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.7788696289062	2	551.778002	1101.54145	0.33143	0.00018288	0.094913	5.2371E-05	0.42634	0.00023525	551.7776556243681	30.434	0.52094	30.387	30.099	30.62	-0.047064					28	12	3	0	0	0	0.73802	1	1657	1657		37.812	3.639	1	89642	+		45560	16404	30594	30607	51535	51535					-0.005258384014496187
QNRLIATK	8	Unmodified	_QNRLIATK_					0	0	0		ENSG00000183508|ENST00000369448|TENT5C	ENSG00000183508|ENST00000369448|TENT5C	ENSG00000183508|ENST00000369448|TENT5C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2866516113281	2	472.287808	942.561064	-0.9074	-0.00042856	1.8926	0.00089384	0.98517	0.00046528	472.2888733808942	102.09	1.2249	102.29	101.67	102.89	0.19484					49	29	2	0	0	0	0.87064	1	10750	10750		29.15	7.1897	1	348320			45561	7536	30595	30608	51536	51536					0.0874858239999412
QNRLLILILSI	11	Unmodified	_QNRLLILILSI_					0	0	0		ENSG00000155495|ENST00000285879|MAGEC1;nc|ENSG00000155495|O60732-2|MAGEC1	ENSG00000155495|ENST00000285879|MAGEC1	ENSG00000155495|ENST00000285879|MAGEC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3931274414062	2	648.424105	1294.83366	-1.141	-0.00073988	0.24052	0.00015596	-0.90053	-0.00058392	648.4243785394639	107.46	0.12599	107.49	107.41	107.54	0.036125					4	2	2	0	0	0	0.17868	1	11463	11463		9.7057	0	1	63935			45562	5324	30596	30609	51537	51537					0.19803346350522588
QNRRMKWKRVK	11	Unmodified	_QNRRMKWKRVK_					0	0	0		nc|ENSG00000005102|P50221-3|MEOX1;chr17:43661393-43661871|39|15.46|0.6|4.68|-|ENST00000393661|MEOX1,MEOX1;ENSG00000005102|ENST00000318579|MEOX1;ENSG00000106511|ENST00000262041|MEOX2	nc|ENSG00000005102|P50221-3|MEOX1	nc|ENSG00000005102|P50221-3|MEOX1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	510.6337585449219	3	510.636778	1528.8885	-0.66182	-0.00033795	-4.2371	-0.0021636	-4.8989	-0.0025016	510.63445456092177	103.9	1.2109	103.9	103.18	104.39	0					61	29	3	0	0	0	0.81021	1	10723	10723		9.2118	3.2108	1	568590			45563	229	30597	30610	51538	51538					0.14521454670102685
QNRRRHELVRQ	11	Unmodified	_QNRRRHELVRQ_					0	0	0			REV__nc|ENSG00000168309|O95990-2|FAM107A	REV__nc|ENSG00000168309|O95990-2|FAM107A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.9516296386719	3	497.950301	1490.82907	0.72177	0.00035941	0.8089	0.00040279	1.5307	0.0007622	497.9506594640085	23.888	0.82867	23.944	23.607	24.435	0.055487					39	21	3	0	0	0	0.75121	1	837	837		21.78	7.6944	1	87871	+		45564	21478	30598	30611	51539	51539					0.1032927498031313
QNRRRHELVRQ	11	Unmodified	_QNRRRHELVRQ_					0	0	0			REV__nc|ENSG00000168309|O95990-2|FAM107A	REV__nc|ENSG00000168309|O95990-2|FAM107A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.81903076171875	3	497.950301	1490.82907	0.16857	8.3939E-05	-0.2405	-0.00011976	-0.071931	-3.5818E-05	498.285452721185	38.993	0.21835	38.963	38.896	39.114	-0.03027					7	4	2	0	0	0	0.17911	1	2697	2697		9.2118	0	1	21209	+		45565	21478	30598	30611	51540	51540					0.1032927498031313
QNRRRHELVRQ	11	Unmodified	_QNRRRHELVRQ_					0	0	0			REV__nc|ENSG00000168309|O95990-2|FAM107A	REV__nc|ENSG00000168309|O95990-2|FAM107A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.2868957519531	3	497.950301	1490.82907	-0.76848	-0.00038267	2.413	0.0012016	1.6445	0.0008189	497.9514380299923	24.167	0.79495	24.123	23.735	24.53	-0.043221					52	19	4	0	0	0	0.77205	1	845	845		17.167	7.5206	1	93776	+		45566	21478	30598	30611	51541	51541					0.1032927498031313
QNRRRHELVRQ	11	Unmodified	_QNRRRHELVRQ_					0	0	0			REV__nc|ENSG00000168309|O95990-2|FAM107A	REV__nc|ENSG00000168309|O95990-2|FAM107A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.9512634277344	3	497.950301	1490.82907	1.9027	0.00094744	-0.38779	-0.0001931	1.5149	0.00075435	497.9500785966066	24.766	1.0222	24.252	23.746	24.768	-0.51365					66	22	5	0	0	0	0.79224	1	1205	1205		12.957	0	1	639230	+		45567	21478	30598	30611	51542	51542					0.1032927498031313
QNSCVDCSV	9	2 Carbamidomethyl (C)	_QNSC(Carbamidomethyl (C))VDC(Carbamidomethyl (C))SV_	QNSC(1)VDC(1)SV		QNSC(61)VDC(61)SV		0	2	0		ENSG00000127947|ENST00000248594|PTPN12;nc|ENSG00000127947|Q05209-2|PTPN12;nc|ENSG00000127947|Q05209-3|PTPN12	ENSG00000127947|ENST00000248594|PTPN12	ENSG00000127947|ENST00000248594|PTPN12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	534.7100830078125	2	534.707873	1067.40119	0.11212	5.995E-05	3.0907	0.0016526	3.2028	0.0017126	534.7094103207395	49.086	0.57461	49.08	48.781	49.355	-0.0056419					27	12	3	0	0	0	0.35373	1	4095	4095		60.972	13.315	1	168280			45568	3519	30599	30612	51543	51543	46;47				-0.12981081721659393
QNSFMKSSKS	10	Unmodified	_QNSFMKSSKS_					0	0	0		MER92-int_dup937|chr22:50799208-50799654:-|1.017030345513651|0.2548607445478844|2.0|63.0|18|3|sense	MER92-int_dup937|chr22:50799208-50799654:-|1.017030345513651|0.2548607445478844|2.0|63.0|18|3|sense	MER92-int_dup937|chr22:50799208-50799654:-|1.017030345513651|0.2548607445478844|2.0|63.0|18|3|sense	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.2716674804688	2	572.27678	1142.53901	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.177	1	58.211	57.711	58.711	0.033905								0	0	0	0.45132	1	5326	5326		42.864	11.334	1				45569	14718	30600	30613	51544	51544					-0.02656010130726827
QNSGVLLIA	9	Unmodified	_QNSGVLLIA_					0	0	0			REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7886657714844	2	457.768917	913.523281	-2.6088	-0.0011942	0.30563	0.00013991	-2.3032	-0.0010543	457.7689625481164	40.633	0.44184	41.025	40.76	41.202	0.39209					19	12	2	0	0	0	0.20789	1	3473	3473		24.203	11.996	1	630000	+		45570	19858	30601	30614	51545	51545					0.06306071414519465
QNSNSRVTKL	10	Unmodified	_QNSNSRVTKL_					0	0	0			REV__ENSG00000181626|ENST00000587848|ANKRD62	REV__ENSG00000181626|ENST00000587848|ANKRD62	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.7695922851562	2	573.814919	1145.61528	-1.2616	-0.00072392	3.9138	0.0022458	2.6522	0.0015219	573.8172251393623	60.196	0.52544	60.587	60.413	60.938	0.39077					32	14	3	0	0	0	0.37624	1	6383	6383		40.778	2.9666	1	650480	+		45571	22468	30602	30615	51546	51546					0.048301297608986715
QNSSPHLPKL	10	Unmodified	_QNSSPHLPKL_					0	0	0		nc|ENSG00000100485|Q07890-2|SOS2;ENSG00000100485|ENST00000216373|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8031616210938	2	560.809105	1119.60366	-0.087449	-4.9042E-05	0.26433	0.00014824	0.17688	9.9194E-05	560.8091081677871	31.44	0.77379	31.52	31.209	31.983	0.079836					46	17	4	0	0	0	0.54701	1	2115	2115		52.937	3.4007	1	979640			45572	1843	30603	30616	51547	51547					0.04863932737566756
QNTARLVHEAF	11	Unmodified	_QNTARLVHEAF_					0	0	0			REV__ENST00000460579.5_1_2:219527197-219528106:+|nuORF	REV__ENST00000460579.5_1_2:219527197-219528106:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4055786132812	2	643.336018	1284.65748	-0.030126	-1.9381E-05	-2.102	-0.0013523	-2.1321	-0.0013717	643.3338544870529	105.98	0.19754	105.95	105.86	106.05	-0.025146					6	4	2	0	0	0	0.17226	1	11501	11501		42.864	5.0528	1	42235	+		45573	16691	30604	30617	51548	51548					0.026541051692674955
QNTCEGGV	8	Unmodified	_QNTCEGGV_					0	0	0			REV__nc|ENSG00000117155|Q9Y2D8-3|SSX2IP	REV__nc|ENSG00000117155|Q9Y2D8-3|SSX2IP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.1702880859375	2	404.16871	806.322867	-0.18774	-7.5878E-05	3.363	0.0013592	3.1752	0.0012833	404.170229386983	78.542	2.4005	78.598	78.112	80.513	0.056114					177	77	5	0	0	0	0.8621	1	7752	7752		26.693	3.6504	1	6189200	+		45574	18249	30605	30618	51549	51549					-0.08804146244585809
QNTPSCTHL	9	Unmodified	_QNTPSCTHL_					0	0	0			REV__nc|ENSG00000185760|Q9NR82-2|KCNQ5	REV__nc|ENSG00000185760|Q9NR82-2|KCNQ5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29052734375	2	500.729466	999.444379	-0.93896	-0.00047017	-2.8899	-0.001447	-3.8288	-0.0019172	501.22950630378466	83.355	0.63254	83.786	83.535	84.168	0.43108					26	14	2	0	0	0	0.20789	1	9719	9719		40.778	23.413	1	217380	+		45575	15892	30606	30619	51550	51550					-0.05536523882074107
QNTSALIVV	9	Unmodified	_QNTSALIVV_					0	0	0			REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	REV__ENST00000521792.2_1_8:43125532-43126024:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.7743835449219	2	472.7742	943.533846	-0.13618	-6.4381E-05	1.7563	0.00083035	1.6202	0.00076597	472.7741354171197	22.959	0.93172	22.375	21.851	22.782	-0.58348					48	22	4	0	0	0	0.73802	1	974	974		37.812	3.639	1	487620	+		45576	28125	30607	30620	51551	51551					0.059820540689429436
QNTWHGIVKY	10	Unmodified	_QNTWHGIVKY_					0	0	0			REV__ENST00000341617.7_1_7:126079175-126341814:-|nuORF	REV__ENST00000341617.7_1_7:126079175-126341814:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.3231811523438	2	623.32238	1244.63021	-0.74015	-0.00046135	0.50944	0.00031755	-0.23071	-0.00014381	623.3225358169732	57.039	0.54884	57.039	56.823	57.372	0					53	23	3	0	0	0	0.46422	1	4883	4883		58.782	0	1	309880	+		45577	22345	30608	30621	51552	51552					0.017676216288919022
QNVEFCDFS	9	Carbamidomethyl (C)	_QNVEFC(Carbamidomethyl (C))DFS_	QNVEFC(1)DFS		QNVEFC(41)DFS		0	1	0		ENSG00000166024|ENST00000298999|R3HCC1L;nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L;nc|ENSG00000166024|Q7Z5L2|R3HCC1L	ENSG00000166024|ENST00000298999|R3HCC1L	ENSG00000166024|ENST00000298999|R3HCC1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.2337036132812	2	573.232039	1144.44952	0.69325	0.00039739	2.2636	0.0012976	2.9569	0.001695	573.2331643277087	29.173	1.2859	28.999	28.547	29.833	-0.17336					67	29	3	0	0	0	0.69624	1	1826	1826		40.778	6.6056	1	1232400			45578	6150	30609	30622	51553	51553	76				-0.11692264810130837
QNVKFAAS	8	Unmodified	_QNVKFAAS_					0	0	0		nc|ENSG00000116731|Q13029-5|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;ENSG00000116731|ENST00000311066|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	nc|ENSG00000116731|Q13029-5|PRDM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.1914367675781	2	432.732335	863.450116	2.6376	0.0011414	-3.5945	-0.0015554	-0.9569	-0.00041408	432.73065091566616	100.91	0.64165	101.25	100.86	101.5	0.34591					31	15	3	0	0	0	0.4196	1	12268	12268		12.207	0	1	265030			45579	2943	30610	30623	51554	51554					0.012929426918958598
QNVKKTDWFQ	10	Unmodified	_QNVKKTDWFQ_					0	0	0		ENSG00000137270|ENST00000259803|GCM1	ENSG00000137270|ENST00000259803|GCM1	ENSG00000137270|ENST00000259803|GCM1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.24591064453125	3	431.891055	1292.65134	-1.0265	-0.00044333	-0.43317	-0.00018708	-1.4597	-0.00063041	432.22406443516314	98.816	1.0771	98.816	98.02	99.097	0					37	26	2	0	0	0	0.37624	1	9859	9859		36.318	8.6737	1	38792			45580	4186	30611	30624	51555	51555					0.016715869377549097
QNVKKTDWFQ	10	Unmodified	_QNVKKTDWFQ_					0	0	0		ENSG00000137270|ENST00000259803|GCM1	ENSG00000137270|ENST00000259803|GCM1	ENSG00000137270|ENST00000259803|GCM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.24566650390625	3	431.891055	1292.65134	2.2994	0.00099308	-3.9457	-0.0017041	-1.6463	-0.00071103	432.22263297297957	98.846	0.6665	98.791	98.201	98.867	-0.054817					22	14	2	0	0	0	0.37624	1	10596	10596		25.126	4.811	1	73459			45581	4186	30611	30624	51556	51556					0.016715869377549097
QNVLGQLLNDP	11	Unmodified	_QNVLGQLLNDP_					0	0	0		ENSG00000182158|ENST00000330387|CREB3L2;nc|ENSG00000182158|Q70SY1-2|CREB3L2;nc|ENSG00000182158|Q70SY1-3|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	606.1742553710938	2	605.824952	1209.63535	-0.34101	-0.00020659	-1.0239	-0.00062029	-1.3649	-0.00082688	605.8240685401776	54.355	0.66914	54.94	54.667	55.337	0.58474					32	15	3	0	0	0	0.16675	1	5512	5512		40.058	6.1365	1	376890			45582	7427	30612	30625	51557	51557					0.0389188070084856
QNVLRVVIPEV	11	Unmodified	_QNVLRVVIPEV_					0	0	0		nc|ENSG00000204634|O95759-2|TBC1D8;nc|ENSG00000204634|O95759|TBC1D8;ENSG00000204634|ENST00000409318|TBC1D8	nc|ENSG00000204634|O95759-2|TBC1D8	nc|ENSG00000204634|O95759-2|TBC1D8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.75238037109375	3	422.590717	1264.75032	-0.18703	-7.9036E-05	4.4552	0.0018827	4.2682	0.0018037	422.59232283664664	75.498	0.2083	75.543	75.465	75.673	0.045959					9	5	2	0	0	0	0.1745	1	7268	7268		8.7993	0	1	16422			45583	8473	30613	30626	51558	51558					0.12853609902640528
QNVNKYAE	8	Unmodified	_QNVNKYAE_					0	0	0			REV__nc|ENSG00000109854|Q9BUP3-2|HTATIP2	REV__nc|ENSG00000109854|Q9BUP3-2|HTATIP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2562561035156	2	483.237981	964.461409	0.80188	0.0003875	-0.84818	-0.00040987	-0.046309	-2.2378E-05	483.23750990295815	35.889	0.18861	36.137	36.007	36.195	0.24769					6	4	2	0	0	0	0.4196	1	2779	2779		16.473	3.514	1	131060	+		45584	17777	30614	30627	51559	51559					-0.022242800046228695
QNVVPPGT	8	Unmodified	_QNVVPPGT_					0	0	0		ENST00000511367.6_1_5:31526938-31529149:-|nuORF	ENST00000511367.6_1_5:31526938-31529149:-|nuORF	ENST00000511367.6_1_5:31526938-31529149:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2173156738281	2	406.21906	810.423567	-1.2103	-0.00049164	-1.9851	-0.00080637	-3.1954	-0.001298	406.21809428677255	86.069	1.1127	86.069	85.577	86.69	0					47	25	3	0	0	0	0.84341	1	8182	8182		24.203	1.1603	1	169130			45585	13018	30615	30628	51560	51560					0.010772538005767274
QNWPKPPL	8	Unmodified	_QNWPKPPL_					0	0	0		nc|ENSG00000161681|Q9Y566-2|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1;ENSG00000161681|ENST00000293441|SHANK1	nc|ENSG00000161681|Q9Y566-2|SHANK1	nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.8490295410156	2	490.271627	978.528701	0.56228	0.00027567	-1.9651	-0.00096344	-1.4028	-0.00068777	490.27017460165695	75.152	0.54254	75.285	75.002	75.544	0.13208					21	14	2	0	0	0	0.4196	1	6943	6943		25.45	0	1	45398			45586	5650	30616	30629	51561	51561					0.03857794996974917
QNWVFNLTT	9	Unmodified	_QNWVFNLTT_					0	0	0			REV__L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|157|3|sense	REV__L1PA7_dup7510|chr9:100177037-100183286:+|1.2842162837418132|0.122209282924474|3.39|63.0|157|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	561.7820434570312	2	561.782556	1121.55056	0.37654	0.00021153	-0.53156	-0.00029862	-0.15502	-8.7088E-05	561.7822384535328	46.817	0.53405	46.855	46.582	47.116	0.038181					22	13	2	0	0	0	0.77244	1	3474	3474		32.812	0.061884	1	235790	+		45587	29603	30617	30630	51562	51562					-0.005354450451250159
QNYYRLLTRLN	11	Unmodified	_QNYYRLLTRLN_					0	0	0			REV__ENST00000463348.5_1_6:30227710-30228217:+|nuORF	REV__ENST00000463348.5_1_6:30227710-30228217:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.28961181640625	3	485.268525	1452.78375	0.40227	0.00019521	0.49203	0.00023877	0.8943	0.00043398	485.2703310753771	53.786	0.6706	54.2	53.91	54.58	0.4139					24	15	3	0	0	0	0.17648	1	5450	5450		26.75	2.5179	1	106850	+		45588	27070	30618	30631	51563	51563					0.07546611674547421
QPACRPSL	8	Unmodified	_QPACRPSL_					0	0	0		ENST00000588732.5_1_16:4853794-4854569:-|nuORF	ENST00000588732.5_1_16:4853794-4854569:-|nuORF	ENST00000588732.5_1_16:4853794-4854569:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.18548583984375	2	436.226362	870.438172	1.73	0.00075468	2.9033	0.0012665	4.6333	0.0020212	436.22736610912943	107.03	0.48979	107.13	106.89	107.38	0.10396					27	14	2	0	0	0	0.4196	1	13011	13011		13.775	0	1	180690			45589	14218	30619	30632	51564	51564					-0.00222997322930496
QPAFFHAFYN	10	Unmodified	_QPAFFHAFYN_					0	0	0			REV__CON__Q0VCM5	REV__CON__Q0VCM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.7926635742188	2	621.290548	1240.56654	0.33695	0.00020934	0.82647	0.00051348	1.1634	0.00072282	621.291387826647	23.89	0.61201	23.847	23.629	24.241	-0.043221					23	17	2	0	0	0	0.85939	1	828	828		23.042	1.3567	1	26913	+	+	45590	15996	30620	30633	51565	51565					-0.04411738808175869
QPAGDPRLH	9	Unmodified	_QPAGDPRLH_					0	0	0		ENST00000609076.1_1_19:18255470-18256002:+|nuORF	ENST00000609076.1_1_19:18255470-18256002:+|nuORF	ENST00000609076.1_1_19:18255470-18256002:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.760498046875	2	495.759415	989.504277	-1.9425	-0.00096301	2.7963	0.0013863	0.85379	0.00042327	495.7602537576442	19.302	1.1114	19.302	18.834	19.945	0					76	43	2	0	0	0	0.74721	1	412	412		37.159	6.8414	1	56551			45591	14480	30621	30634	51566	51566					0.00910534843478672
QPAPHPTQG	9	Unmodified	_QPAPHPTQG_					0	0	0			REV__ENST00000587416.5_1_19:2040131-2040269:-|nuORF	REV__ENST00000587416.5_1_19:2040131-2040269:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.73486328125	2	466.732866	931.451179	0.23559	0.00010996	2.6598	0.0012414	2.8953	0.0013514	466.7340279976939	23.781	0.81942	23.399	23.018	23.837	-0.38178					38	18	4	0	0	0	0.69624	1	1093	1093		40.778	1.972	1	358980	+		45592	29129	30622	30635	51567	51567					-0.017288429392010585
QPAPHPTQG	9	Unmodified	_QPAPHPTQG_					0	0	0			REV__ENST00000587416.5_1_19:2040131-2040269:-|nuORF	REV__ENST00000587416.5_1_19:2040131-2040269:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	466.732866	931.451179	0.7175	0.00033488	10.074	0.0047019	10.792	0.0050368	466.7372684319491	23.282	0.41697	23.342	23.194	23.611	0.060431	0.046056	0.005785	NaN	40.778	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28799	+		45593	29129	30622	30635							-0.017288429392010585
QPAPLQRRIKF	11	Unmodified	_QPAPLQRRIKF_					0	0	0			REV__ENSG00000185567|ENST00000333244|AHNAK2	REV__ENSG00000185567|ENST00000333244|AHNAK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.2781982421875	3	451.941973	1352.80409	-1.6861	-0.00076203	4.482	0.0020256	2.7959	0.0012636	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.76579	1	4499	4499		18.531	4.445	1	792670	+		45594	22775	30623	30636	51568	51568					0.1417982712500816
QPAPLQRRIKF	11	Unmodified	_QPAPLQRRIKF_					0	0	0			REV__ENSG00000185567|ENST00000333244|AHNAK2	REV__ENSG00000185567|ENST00000333244|AHNAK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9432678222656	3	451.941973	1352.80409	0.2172	9.8162E-05	2.4446	0.0011048	2.6618	0.001203	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.74022	1	4812	4812		24.232	4.9691	1	771970	+		45595	22775	30623	30636	51569	51569					0.1417982712500816
QPAPLQRRIKF	11	Unmodified	_QPAPLQRRIKF_					0	0	0			REV__ENSG00000185567|ENST00000333244|AHNAK2	REV__ENSG00000185567|ENST00000333244|AHNAK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.9430236816406	3	451.941973	1352.80409	-0.56282	-0.00025436	3.1394	0.0014188	2.5766	0.0011645	451.9432961289507	50.995	2.7237	51.43	49.805	52.529	0.43505					150	65	3	0	0	0	0.74405	1	5052	5052		23.378	2.3457	1	757900	+		45596	22775	30623	30636	51570	51570					0.1417982712500816
QPAQDIFSVY	10	Unmodified	_QPAQDIFSVY_					0	0	0		ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.2872314453125	2	584.287671	1166.56079	-0.35757	-0.00020893	0.96983	0.00056666	0.61225	0.00035773	584.2883048001765	79.267	0.68226	79.816	79.531	80.213	0.54945					39	15	4	0	0	0	0.2953	1	9109	9109		72.879	19.943	1	676470			45597	5685	30624	30637	51571	51571					-0.015828821105060342
QPAQDIFSVY	10	Unmodified	_QPAQDIFSVY_					0	0	0		ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	584.287671	1166.56079	-0.96625	-0.00056457	1.7123	0.0010005	0.74605	0.00043591	584.2886320308427	79.413	0.59529	79.83	79.53	80.125	0.41621	0.0068315	0.00049116	NaN	72.879	37	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	585100			45598	5685	30624	30637							-0.015828821105060342
QPARLGFQ	8	Unmodified	_QPARLGFQ_					0	0	0			REV__ENST00000233535.8_1_2:27481772-27486087:-|nuORF	REV__ENST00000233535.8_1_2:27481772-27486087:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7514953613281	2	458.753601	915.49265	-0.018123	-8.3139E-06	-3.0476	-0.0013981	-3.0657	-0.0014064	458.7518060865104	23.767	1.7664	23.385	23.018	24.785	-0.38178					59	39	2	0	0	0	0.67263	1	1080	1080		68.485	10.673	1	878750	+		45599	24204	30625	30638	51572	51572					0.03152337820131379
QPARLGFQ	8	Unmodified	_QPARLGFQ_					0	0	0			REV__ENST00000233535.8_1_2:27481772-27486087:-|nuORF	REV__ENST00000233535.8_1_2:27481772-27486087:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7517395019531	2	458.753601	915.49265	1.1793	0.00054099	-4.175	-0.0019153	-2.9957	-0.0013743	458.75130962594056	23.717	1.8273	23.143	22.747	24.574	-0.57415					83	41	4	0	0	0	0.47906	1	1095	1095		76.847	11.043	1	885740	+		45600	24204	30625	30638	51573	51573					0.03152337820131379
QPARPLTP	8	Unmodified	_QPARPLTP_					0	0	0			REV__ENST00000574967.5_2_17:78194749-78195313:+|nuORF	REV__ENST00000574967.5_2_17:78194749-78195313:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.25506591796875	2	440.255977	878.497401	-1.1996	-0.00052811	-0.19109	-8.4128E-05	-1.3907	-0.00061224	440.25582777283796	71.837	1.2052	72.222	71.752	72.957	0.38449					55	28	3	0	0	0	0.87064	1	8037	8037		29.15	2.3535	1	420360	+		45601	25494	30626	30639	51574	51574					0.053292219628815474
QPASLSPK	8	Unmodified	_QPASLSPK_					0	0	0			REV__ENST00000417647.6_1_5:140032665-140033557:+|nuORF	REV__ENST00000417647.6_1_5:140032665-140033557:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.7792053222656	2	414.23471	826.454868	-0.128	-5.3023E-05	2.2535	0.00093348	2.1255	0.00088046	414.2366513972356	29.264	0.43217	29.235	28.997	29.429	-0.029207					11	9	2	0	0	0	0.4196	1	1835	1835		32.812	0	1	51685	+		45602	26448	30627	30640	51575	51575					0.034698268346687655
QPATGPGQPLP	11	Unmodified	_QPATGPGQPLP_					0	0	0		ENST00000329493.5_1_19:3543262-3543451:+|nuORF	ENST00000329493.5_1_19:3543262-3543451:+|nuORF	ENST00000329493.5_1_19:3543262-3543451:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.7821655273438	2	531.782556	1061.55056	-0.45981	-0.00024452	0.04954	2.6344E-05	-0.41027	-0.00021817	531.7825831037422	29.277	2.7619	29.248	28.206	30.968	-0.029207					186	63	5	0	0	0	0.39278	1	1766	1766		59.931	5.1545	1	10622000			45603	10100	30628	30641	51576	51576					0.022245549549097632
QPATMVRV	8	Unmodified	_QPATMVRV_					0	0	0		nc|ENSG00000073146|Q9BXT6-5|MOV10L1;nc|ENSG00000073146|Q9BXT6-4|MOV10L1;ENSG00000073146|ENST00000262794|MOV10L1	nc|ENSG00000073146|Q9BXT6-5|MOV10L1	nc|ENSG00000073146|Q9BXT6-5|MOV10L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.24755859375	2	451.249837	900.485122	-0.10221	-4.6121E-05	-2.4347	-0.0010987	-2.537	-0.0011448	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.88601	1	6424	6424		34.173	0	1	178200			45604	1288	30629	30642	51577	51577					0.0308986222820522
QPCGRRAG	8	Unmodified	_QPCGRRAG_					0	0	0		ENST00000591884.2_1_19:19887416-19887605:+|nuORF	ENST00000591884.2_1_19:19887416-19887605:+|nuORF	ENST00000591884.2_1_19:19887416-19887605:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.7118835449219	2	422.713953	843.413354	0.60659	0.00025641	0.19519	8.2507E-05	0.80177	0.00033892	422.7139150439154	25.649	0.90246	25.392	25.087	25.99	-0.2572					38	20	3	0	0	0	0.86288	1	1352	1352		26.796	2.5934	1	209840			45605	14281	30630	30643	51578	51578					-0.01461632405664659
QPCGRRAG	8	Unmodified	_QPCGRRAG_					0	0	0		ENST00000591884.2_1_19:19887416-19887605:+|nuORF	ENST00000591884.2_1_19:19887416-19887605:+|nuORF	ENST00000591884.2_1_19:19887416-19887605:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	422.713953	843.413354	2.8035	0.0011851	-2.6198	-0.0011074	0.18366	7.7638E-05	422.7127052746357	25.653	0.71601	25.221	24.895	25.611	-0.4311	-0.085187	-0.00058597	NaN	26.796	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224660			45606	14281	30630	30643							-0.01461632405664659
QPCLASKVAAR	11	Unmodified	_QPCLASKVAAR_					0	0	0			REV__ENST00000564170.1_1_16:75270707-75271278:-|nuORF	REV__ENST00000564170.1_1_16:75270707-75271278:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	572.3399047851562	2	572.318783	1142.62301	0.6088	0.00034843	1.6919	0.00096833	2.3007	0.0013168	572.3197053723317	32.124	0.10175	32.106	32.035	32.136	-0.017467					5	4	2	0	0	0	0.17472	1	1492	1492		24.519	0	1	30709	+		45607	28832	30631	30644	51579	51579					0.05740565756809701
QPCVGTIKRIE	11	Unmodified	_QPCVGTIKRIE_					0	0	0			REV__ENSG00000154262|ENST00000284425|ABCA6	REV__ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3468017578125	2	622.344997	1242.67544	-0.2781	-0.00017307	3.9759	0.0024744	3.6978	0.0023013	622.3475674365299	96.114	2.8356	96.18	95.181	98.017	0.06591					140	66	3	0	0	0	0.61369	1	10117	10117		42.864	6.4175	1	306120	+		45608	20377	30632	30645	51580	51580					0.06381104099796175
QPDPDAIKMF	10	Unmodified	_QPDPDAIKMF_					0	0	0		nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-3|CELF2;ENSG00000048740|ENST00000633077|CELF2	nc|ENSG00000048740|O95319-5|CELF2	nc|ENSG00000048740|O95319-5|CELF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.8043212890625	2	581.284074	1160.5536	-0.4353	-0.00025303	0.64939	0.00037748	0.21408	0.00012444	581.2841998345763	62.897	1.133	63.452	63.08	64.213	0.55449					42	26	2	0	0	0	0.37624	1	6771	6771		30.318	10.958	1	176640			45609	978	30633	30646	51581	51581					-0.020259379826029544
QPDRFYKQAFE	11	Unmodified	_QPDRFYKQAFE_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.8954162597656	3	476.901731	1427.68336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.75	1	114.68	114.18	115.18	-0.07								0	0	0	0.56276	1	12398	12398		9.6461	0	1		+		45610	17017	30634	30647	51582	51582					-0.013370453790912507
QPEGAGACY	9	Unmodified	_QPEGAGACY_					0	0	0		ENSG00000157399|ENST00000381134|ARSL	ENSG00000157399|ENST00000381134|ARSL	ENSG00000157399|ENST00000381134|ARSL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.1860046386719	2	448.18436	894.354167	1.6254	0.00072848	1.8494	0.00082888	3.4748	0.0015574	448.1854347640604	98.6	0.93456	98.977	98.449	99.384	0.37678					49	22	4	0	0	0	0.74721	2	11926	11926;11937		37.159	5.023	1	925000			45611	5427	30635	30648	51583;51584	51583					-0.09723573210499126
QPEGKNNLF	9	Unmodified	_QPEGKNNLF_					0	0	0		nc|ENSG00000148143|Q96JM2-3|ZNF462;ENSG00000148143|ENST00000277225|ZNF462;nc|ENSG00000148143|Q96JM2-2|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.6349487304688	2	523.766906	1045.51926	-0.50063	-0.00026221	-1.9961	-0.0010455	-2.4967	-0.0013077	523.765776261119	45.273	0.3052	45.242	44.973	45.278	-0.031067					8	6	2	0	0	0	0.20789	1	3652	3652		44.377	7.2181	1	29007			45612	4934	30636	30649	51585	51585					-0.0016801807921638101
QPEILPFLRGI	11	Unmodified	_QPEILPFLRGI_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8821411132812	2	641.87953	1281.74451	1.4722	0.00094496	3.0644	0.001967	4.5366	0.002912	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.61369	1	11659	11659		42.864	10.052	1	4511200	+		45613	24025	30637	30650	51586	51586					0.11490511390979918
QPEILPFLRGI	11	Unmodified	_QPEILPFLRGI_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8823852539062	2	641.87953	1281.74451	2.6248	0.0016848	1.9473	0.0012499	4.5721	0.0029347	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.61369	1	11871	11871		42.864	0.46813	1	4455800	+		45614	24025	30637	30650	51587	51587					0.11490511390979918
QPEVTQQAK	9	Unmodified	_QPEVTQQAK_					0	0	0		ENST00000526047.1_1_11:74618188-74632322:-|nuORF	ENST00000526047.1_1_11:74618188-74632322:-|nuORF	ENST00000526047.1_1_11:74618188-74632322:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.7706298828125	2	514.772188	1027.52982	0.88341	0.00045476	-0.97798	-0.00050343	-0.094564	-4.8679E-05	514.7712536354973	23.675	0.8203	23.293	22.887	23.707	-0.38178					25	18	3	0	0	0	0.78528	1	1076	1076		29.17	0.020503	1	113440			45615	13249	30638	30651	51588	51588					0.017159645752371944
QPEWHLCV	8	Unmodified	_QPEWHLCV_					0	0	0			REV__ENST00000395105.8_1_15:74472186-74472399:-|nuORF	REV__ENST00000395105.8_1_15:74472186-74472399:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.75341796875	2	506.23947	1010.46439	1.5719	0.00079577	-2.4041	-0.001217	-0.83218	-0.00042128	506.2380522583665	102.13	0.33379	102.4	102.23	102.56	0.26323					10	7	2	0	0	0	0.4196	1	12401	12401		25.45	0	1	76158	+		45616	26098	30639	30652	51589	51589					-0.040427281514553215
QPFLCLRG	8	Unmodified	_QPFLCLRG_					0	0	0		nc|ENSG00000149305|O95264-2|HTR3B;ENSG00000149305|ENST00000260191|HTR3B	nc|ENSG00000149305|O95264-2|HTR3B	nc|ENSG00000149305|O95264-2|HTR3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2328186035156	2	467.25238	932.490207	-0.43901	-0.00020513	-4.042	-0.0018886	-4.481	-0.0020938	467.2502458239274	66.829	0.28836	67.38	67.246	67.535	0.55071					15	10	2	0	0	0	0.4196	1	7345	7345		38.806	0	1	202910			45617	5017	30640	30653	51590	51590					0.02126166090829429
QPFYHDDSY	9	Unmodified	_QPFYHDDSY_					0	0	0		ENSG00000171223|ENST00000302754|JUNB	ENSG00000171223|ENST00000302754|JUNB	ENSG00000171223|ENST00000302754|JUNB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.238525390625	2	586.238178	1170.4618	-1.3619	-0.00079838	0.8854	0.00051905	-0.47647	-0.00027932	586.2385898656845	45.153	0.65535	45.616	45.345	46	0.46313					46	15	4	0	0	0	0.22631	3	4190	4178;4190;4202		71.296	27.179	1	3207500			45618	6649	30641	30654	51591;51592;51593	51592					-0.11660905075427763
QPFYHDDSY	9	Unmodified	_QPFYHDDSY_					0	0	0		ENSG00000171223|ENST00000302754|JUNB	ENSG00000171223|ENST00000302754|JUNB	ENSG00000171223|ENST00000302754|JUNB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.2380981445312	2	586.238178	1170.4618	-0.99388	-0.00058265	0.36469	0.00021379	-0.62919	-0.00036886	586.238310740397	44.944	1.1764	45.788	45.461	46.637	0.84438					57	28	4	0	0	0	0.10807	2	4173	4161;4173		90.777	46.66	1	3002900			45619	6649	30641	30654	51594;51595	51595					-0.11660905075427763
QPFYRAKSKK	10	Unmodified	_QPFYRAKSKK_					0	0	0		ENSG00000016602|ENST00000370563|CLCA4	ENSG00000016602|ENST00000370563|CLCA4	ENSG00000016602|ENST00000370563|CLCA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2418518066406	3	418.24354	1251.70879	0.34366	0.00014373	-3.4993	-0.0014635	-3.1556	-0.0013198	418.24199984171395	17.362	0.69825	16.752	16.305	17.003	-0.6107					35	15	4	0	0	0	0.78666	1	262	262		40.058	3.6114	1	327120			45620	828	30642	30655	51596	51596					0.09300473933967623
QPGDWTLF	8	Unmodified	_QPGDWTLF_					0	0	0		nc|ENSG00000133110|Q15063-7|POSTN;nc|ENSG00000133110|Q15063-6|POSTN;nc|ENSG00000133110|Q15063-4|POSTN;nc|ENSG00000133110|Q15063-10|POSTN;nc|ENSG00000133110|Q15063-2|POSTN;nc|ENSG00000133110|Q15063-3|POSTN;nc|ENSG00000133110|Q15063-9|POSTN;nc|ENSG00000133110|Q15063-8|POSTN;nc|ENSG00000133110|Q15063-5|POSTN;ENSG00000133110|ENST00000379747|POSTN;CON__Q2KJC7	nc|ENSG00000133110|Q15063-7|POSTN	nc|ENSG00000133110|Q15063-7|POSTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.7578125	2	482.232168	962.449782	-0.45934	-0.00022151	-3.2705	-0.0015771	-3.7298	-0.0017986	482.2303920536245	38.861	0.67948	39.203	39.065	39.745	0.34187					20	15	2	0	0	0	0.4196	1	3249	3249		18.324	5.3652	1	95208			45621	3857	30643	30656	51597	51597					-0.0329447702795278
QPGGLNRHS	9	Unmodified	_QPGGLNRHS_					0	0	0		ENSG00000225614|ENST00000565624|ZNF469	ENSG00000225614|ENST00000565624|ZNF469	ENSG00000225614|ENST00000565624|ZNF469	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.7578125	2	483.249215	964.483876	-0.47374	-0.00022894	-2.7812	-0.001344	-3.255	-0.001573	483.2479435710789	38.811	0.80682	39.153	38.896	39.703	0.34187					27	18	3	0	0	0	0.20789	1	3249	3249		23.042	12.858	1	101760			45622	8708	30644	30657	51598	51598					0.00021364183669447812
QPGGPEAR	8	Unmodified	_QPGGPEAR_					0	0	0			REV__ENST00000222573.4_1_7:20371057-20371243:+|nuORF	REV__ENST00000222573.4_1_7:20371057-20371243:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2066955566406	2	406.206484	810.398415	0.92034	0.00037385	-0.43108	-0.00017511	0.48926	0.00019874	406.2061549713193	28.141	0.62433	27.886	27.454	28.078	-0.25465					19	14	2	0	0	0	0.93786	1	1687	1687		53.351	3.9099	1	128410	+		45623	24163	30645	30658	51599	51599					-0.014368010020120892
QPGINYALGTN	11	Unmodified	_QPGINYALGTN_					0	0	0		ENSG00000174684|ENST00000311181|B4GAT1	ENSG00000174684|ENST00000311181|B4GAT1	ENSG00000174684|ENST00000311181|B4GAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.2902221679688	2	574.290745	1146.56694	0.047433	2.724E-05	-0.94092	-0.00054036	-0.89348	-0.00051312	574.290096159111	16.286	0.35611	15.799	15.65	16.006	-0.48718					16	7	3	0	0	0	0.69248	1	119	119		32.751	1.2207	1	550880			45624	6953	30646	30659	51600	51600					-0.0004836387897739769
QPGIPPKL	8	Unmodified	_QPGIPPKL_					0	0	0		chr10:89285264-89286872|20|25.55|0.0|21.28|+|2|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|1;chr10:89285264-89286796|15|22.93|0.0|21.13|+|0|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286796,89288116|IFIT2,None|2	chr10:89285264-89286872|20|25.55|0.0|21.28|+|2|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|1	chr10:89285264-89286872|20|25.55|0.0|21.28|+|2|TE_info:HERVH-int,HERVH-int_dup4062,ERV1,LTR,acceptor,+,89286872,89288116|IFIT2,None|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.8057861328125	2	425.263271	848.511988	0.87022	0.00037007	-0.59513	-0.00025309	0.27509	0.00011699	425.2627698401039	19.055	0.42578	18.578	18.357	18.783	-0.47694					14	9	2	0	0	0	0.4196	1	455	455		17.365	13.681	1	30544			45625	86	30647	30660	51601	51601					0.08167294111046886
QPGKVVVF	8	Unmodified	_QPGKVVVF_					0	0	0		ENSG00000173221|ENST00000237858|GLRX	ENSG00000173221|ENST00000237858|GLRX	ENSG00000173221|ENST00000237858|GLRX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2626647949219	2	437.263271	872.511988	1.5079	0.00065936	4.3859	0.0019178	5.8938	0.0025772	437.26518584977657	27.503	2.0915	27.248	26.544	28.636	-0.25465					92	49	2	0	0	0	0.80706	1	1775	1775		19.36	4.6959	1	428760			45626	6841	30648	30661	51602	51602					0.07063294111037521
QPGLIPLQPN	10	Unmodified	_QPGLIPLQPN_					0	0	0		nc|ENSG00000175727|Q9HAP2-3|MLXIP;ENSG00000175727|ENST00000319080|MLXIP;ENST00000538061.1_12:122614496-122617938:+|nuORF	nc|ENSG00000175727|Q9HAP2-3|MLXIP	nc|ENSG00000175727|Q9HAP2-3|MLXIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.8068237304688	2	538.808574	1075.60259	-1.4886	-0.00080208	-1.9733	-0.0010633	-3.462	-0.0018653	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.8608	1	9043	9043		34.173	6.2903	1	783690			45627	7032	30649	30662	51603	51603					0.06781718368665679
QPGLPYGY	8	Unmodified	_QPGLPYGY_					0	0	0		ENSG00000136931|ENST00000373588|NR5A1	ENSG00000136931|ENST00000373588|NR5A1	ENSG00000136931|ENST00000373588|NR5A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.76104736328125	2	447.721436	893.428318	1.2989	0.00058156	0.80143	0.00035882	2.1004	0.00094037	447.72201000564803	23.688	0.51279	23.114	22.878	23.391	-0.57415					15	11	2	0	0	0	0.4196	1	1100	1100		28.254	0	1	115770			45628	4159	30650	30663	51604	51604					-0.022658620566744503
QPGLVIDL	8	Unmodified	_QPGLVIDL_					0	0	0		ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1	ENSG00000115415|ENST00000361099|STAT1	ENSG00000115415|ENST00000361099|STAT1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.26153564453125	2	427.752736	853.490919	-1.6717	-0.00071508	-2.0811	-0.00089021	-3.7529	-0.0016053	427.75251673131834	91.309	0.29221	91.527	91.337	91.629	0.21737					12	6	3	0	0	0	0.4196	1	9172	9172		10.866	0	1	43579			45629	2841	30651	30664	51605	51605					0.0583128401152635
QPGLVTPR	8	Unmodified	_QPGLVTPR_					0	0	0		ENSG00000085999|ENST00000371975|RAD54L;ENST00000493032.5_1_1:46714192-46726402:+|nuORF;ENST00000487700.1_1_1:46714192-46733228:+|nuORF;ENST00000463715.5_3_1:46714207-46726591:+|nuORF	ENSG00000085999|ENST00000371975|RAD54L	ENSG00000085999|ENST00000371975|RAD54L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2522277832031	2	434.255977	866.497401	-0.16775	-7.2849E-05	-0.58422	-0.0002537	-0.75198	-0.00032655	434.2535881638074	82.699	0.38393	82.765	82.528	82.912	0.065918					11	8	2	0	0	0	0.4196	1	8162	8162		32.812	0	1	21410			45630	1549	30652	30665	51606	51606					0.05881221962897598
QPGMKLIL	8	Unmodified	_QPGMKLIL_					0	0	0		ENST00000556504.5_2_14:100828236-100841699:-|nuORF	ENST00000556504.5_2_14:100828236-100841699:-|nuORF	ENST00000556504.5_2_14:100828236-100841699:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.27447509765625	2	450.272781	898.531009	1.3234	0.00059587	2.0996	0.00094537	3.4229	0.0015412	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.87922	1	9942	9942		31.955	2.1133	1	51698000			45631	13750	30653	30666	51607	51607					0.07768507410446546
QPGMKLIL	8	Unmodified	_QPGMKLIL_					0	0	0		ENST00000556504.5_2_14:100828236-100841699:-|nuORF	ENST00000556504.5_2_14:100828236-100841699:-|nuORF	ENST00000556504.5_2_14:100828236-100841699:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7541809082031	2	450.272781	898.531009	0.57405	0.00025848	3.584	0.0016138	4.1581	0.0018723	450.2743507904109	80.94	0.75647	81.083	80.612	81.369	0.14352					26	17	2	0	0	0	0.4196	1	7766	7766		26.796	8.4717	1	71445			45632	13750	30653	30666	51608	51608					0.07768507410446546
QPGNHLKT	8	Unmodified	_QPGNHLKT_					0	0	0			REV__chr13:43055543-43068930|15|37.13|0.22|7.43|+|0|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|4	REV__chr13:43055543-43068930|15|37.13|0.22|7.43|+|0|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.76141357421875	2	447.743234	893.471915	1.3059	0.0005847	-3.0384	-0.0013604	-1.7325	-0.00077574	447.7433890160508	23.723	0.51377	23.149	22.92	23.433	-0.57415					28	11	4	0	0	0	0.4196	1	1064	1064		38.806	13.356	1	328450	+		45633	15571	30654	30667	51609	51609					0.020917474404768654
QPGNHLKT	8	Unmodified	_QPGNHLKT_					0	0	0			REV__chr13:43055543-43068930|15|37.13|0.22|7.43|+|0|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|4	REV__chr13:43055543-43068930|15|37.13|0.22|7.43|+|0|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.76141357421875	2	447.743234	893.471915	1.196	0.00053549	0.064999	2.9103E-05	1.261	0.00056459	447.7435142276988	23.604	0.13216	23.03	22.92	23.052	-0.57415					4	2	2	0	0	0	0.4196	1	1064	1064		38.806	13.356	1	70677	+		45634	15571	30654	30667	51610	51610					0.020917474404768654
QPGPSRRLPTL	11	Unmodified	_QPGPSRRLPTL_					0	0	0		ENST00000264560.11_1_19:746795-747209:+|nuORF	ENST00000264560.11_1_19:746795-747209:+|nuORF	ENST00000264560.11_1_19:746795-747209:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3541259765625	2	611.356754	1220.69895	-0.40517	-0.00024771	-0.92075	-0.00056291	-1.3259	-0.00081061	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.7144	1	9671	9671		29.17	0	1	5373200			45635	9480	30655	30668	51611	51611					0.09743285928584555
QPGSFLLIRG	10	Unmodified	_QPGSFLLIRG_					0	0	0			REV__ENSG00000008516|ENST00000336577|MMP25	REV__ENSG00000008516|ENST00000336577|MMP25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.3143310546875	2	544.316566	1086.61858	0.78952	0.00042975	-4.4183	-0.0024049	-3.6287	-0.0019752	544.3140930012478	16.907	0.32985	16.984	16.831	17.161	0.07715					20	13	2	0	0	0	0.86047	1	154	154		23.523	0.48021	1	70088	+		45636	16140	30656	30669	51612	51612					0.07873424605554646
QPGSGPSPEP	10	Unmodified	_QPGSGPSPEP_					0	0	0		nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;ENSG00000105357|ENST00000642316|MYH14;ENST00000597072.1_1_19:50812876-50813044:+|nuORF	nc|ENSG00000105357|Q7Z406-4|MYH14	nc|ENSG00000105357|Q7Z406-4|MYH14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.720947265625	2	476.722164	951.429775	-2.36	-0.001125	-0.34494	-0.00016444	-2.7049	-0.0012895	476.72188156607797	89.101	0.90321	89.572	89.195	90.098	0.47068					46	21	3	0	0	0	0.8545	1	10553	10553		36.447	2.2742	1	1072700			45637	2207	30657	30670	51613	51613					-0.047882727585715656
QPGVQLEP	8	Unmodified	_QPGVQLEP_					0	0	0			REV__nc|ENSG00000061273|Q8WUI4-3|HDAC7	REV__nc|ENSG00000061273|Q8WUI4-3|HDAC7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801818847656	2	434.232168	866.449782	-0.63432	-0.00027544	2.923	0.0012693	2.2887	0.00099383	434.2329451056311	34.64	0.65366	34.584	34.309	34.962	-0.056385					19	14	2	0	0	0	0.4196	1	2186	2186		30.504	0	1	29124	+		45638	16454	30658	30671	51614	51614					0.011215229720505704
QPHEVHVS	8	Unmodified	_QPHEVHVS_					0	0	0			REV__nc|ENSG00000090006|Q8N2S1|LTBP4	REV__nc|ENSG00000090006|Q8N2S1|LTBP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.7341613769531	2	466.732866	931.451179	0.9091	0.00042431	2.0621	0.00096247	2.9712	0.0013868	466.7337412153173	23.721	0.97725	23.147	22.664	23.641	-0.57415					45	22	3	0	0	0	0.88915	1	1089	1089		35.201	0	1	372510	+		45639	29723	30659	30672	51615	51615					-0.017288429391896898
QPHFGFVRARG	11	Unmodified	_QPHFGFVRARG_					0	0	0			REV__chr12:53452641-53454726|17|51.59|0.0|22.3|+|2|None,PCBP2|1	REV__chr12:53452641-53454726|17|51.59|0.0|22.3|+|2|None,PCBP2|1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	636.3411865234375	2	636.341438	1270.66832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.768	1	37.867	37.367	38.367	0.099277								0	0	0	0.56276	1	2190	2190		24.519	0	1		+		45640	15539	30660	30673	51616	51616					0.04381552334234584
QPHLFSINL	9	Unmodified	_QPHLFSINL_					0	0	0			REV__ENSG00000118017|ENST00000236709|A4GNT	REV__ENSG00000118017|ENST00000236709|A4GNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	534.7948608398438	2	534.795466	1067.57638	-0.31576	-0.00016887	0.13013	6.9592E-05	-0.18563	-9.9273E-05	534.7955123159545	57.932	0.73426	57.966	57.632	58.367	0.033905					46	20	3	0	0	0	0.33718	1	5295	5295		62.107	1.1355	1	268290	+		45641	18290	30661	30674	51617	51617					0.04529449197161739
QPHLFSINL	9	Unmodified	_QPHLFSINL_					0	0	0			REV__ENSG00000118017|ENST00000236709|A4GNT	REV__ENSG00000118017|ENST00000236709|A4GNT	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	534.795466	1067.57638	-1.1915	-0.0006372	1.0488	0.00056091	-0.14265	-7.629E-05	534.795990325514	58.027	0.62212	58.027	57.785	58.407	0	0.035212	0.0012861	NaN	62.107	52	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	126740	+		45642	18290	30661	30674							0.04529449197161739
QPHLFSINL	9	Unmodified	_QPHLFSINL_					0	0	0			REV__ENSG00000118017|ENST00000236709|A4GNT	REV__ENSG00000118017|ENST00000236709|A4GNT	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	534.795466	1067.57638	-0.43568	-0.000233	0.054837	2.9326E-05	-0.38084	-0.00020367	534.7955235186319	57.947	0.63086	57.931	57.686	58.317	-0.016426	-0.061211	0.00022297	NaN	62.107	52	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	205940	+		45643	18290	30661	30674							0.04529449197161739
QPHRPARPAP	10	Unmodified	_QPHRPARPAP_					0	0	0		ENST00000221086.7_1_8:11142255-11142417:+|nuORF	ENST00000221086.7_1_8:11142255-11142417:+|nuORF	ENST00000221086.7_1_8:11142255-11142417:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.8147583007812	2	563.815056	1125.61556	0.44055	0.00024839	2.7992	0.0015782	3.2397	0.0018266	563.8167106325166	53.732	0.9845	53.814	53.413	54.398	0.081524					36	24	2	0	0	0	0.86718	1	4374	4374		27.882	1.1893	1	160630			45644	9168	30662	30675	51618	51618					0.05777594271421549
QPHRSLRHPLR	11	Unmodified	_QPHRSLRHPLR_					0	0	0			REV__ENST00000409443.6_1_2:172016940-172017408:-|nuORF	REV__ENST00000409443.6_1_2:172016940-172017408:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.2333679199219	3	466.272604	1395.79598	-1.0544	-0.00049162	2.9189	0.001361	1.8645	0.00086939	466.27392611650356	69.039	0.77501	69.174	68.804	69.579	0.13521					98	34	4	0	0	0	0.17396	1	6255	6255		53.597	40.089	1	1223200	+		45645	26345	30663	30676	51619	51619					0.11391692928282282
QPHTKTFLNK	10	Unmodified	_QPHTKTFLNK_					0	0	0			REV__ENST00000593637.5_1_19:14640508-14674910:+|nuORF	REV__ENST00000593637.5_1_19:14640508-14674910:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.2268371582031	3	405.227779	1212.66151	0.067074	2.718E-05	-1.6033	-0.00064969	-1.5362	-0.00062251	405.2271099047801	26.788	0.59341	26.897	26.654	27.247	0.10901					49	27	2	0	0	0	0.85441	1	1030	1030		20.837	0.80668	1	95384	+		45646	17103	30664	30677	51620	51620					0.06368194662968563
QPIIISIV	8	Unmodified	_QPIIISIV_					0	0	0		ENSG00000059804|ENST00000075120|SLC2A3;ENST00000490763.1_1_12:8078421-8082456:-|nuORF;nc|ENSG00000173262|Q8TDB8-4|SLC2A14;ENSG00000173262|ENST00000431042|SLC2A14;nc|ENSG00000173262|Q8TDB8|SLC2A14;nc|ENSG00000173262|Q8TDB8-5|SLC2A14;ENST00000495813.5_1_12:8082264-8082456:-|nuORF	ENSG00000059804|ENST00000075120|SLC2A3	ENSG00000059804|ENST00000075120|SLC2A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7879943847656	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.82419	1	3292	3292		13.775	0	1	54520000			45647	1058	30665	30678	51621	51621					0.11308733942337312
QPIKLARGLG	10	Unmodified	_QPIKLARGLG_					0	0	0		chr19:8321569-8322272|26|91.31|0.05|10.86|+|0|RPS28,RPS28|1	chr19:8321569-8322272|26|91.31|0.05|10.86|+|0|RPS28,RPS28|1	chr19:8321569-8322272|26|91.31|0.05|10.86|+|0|RPS28,RPS28|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.8307495117188	2	526.832383	1051.65021	-0.63369	-0.00033385	-1.7948	-0.00094557	-2.4285	-0.0012794	526.8314539429292	99.046	1.7562	99.046	98.528	100.28	0					92	42	3	0	0	0	0.86718	1	9997	9997		27.882	2.4321	1	488410			45648	300	30666	30679	51622	51622					0.12645417359476596
QPILASSTM	9	Unmodified	_QPILASSTM_					0	0	0			REV__ENSG00000121381|ENST00000240691|TAS2R9	REV__ENSG00000121381|ENST00000240691|TAS2R9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.23138427734375	2	474.24696	946.479368	0.68652	0.00032558	-3.7036	-0.0017564	-3.0171	-0.0014309	474.2450893076519	54.577	0.46136	54.983	54.699	55.16	0.40663					12	10	2	0	0	0	0.20789	1	5534	5534		19.997	0	1	99260	+		45649	18454	30667	30680	51623	51623					0.003987189258850776
QPINLIFRY	9	Unmodified	_QPINLIFRY_					0	0	0		ENSG00000182004|ENST00000414487|SNRPE	ENSG00000182004|ENST00000414487|SNRPE	ENSG00000182004|ENST00000414487|SNRPE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3327026367188	2	582.332216	1162.64988	-1.3258	-0.00077203	1.5955	0.00092911	0.26974	0.00015708	582.3330829864858	74.703	0.99126	75.094	74.747	75.738	0.3911					68	23	4	0	0	0	0.09311	3	8410	8410;8421;8435		94.006	51.61	1	3446300			45650	7417	30668	30681	51624;51625;51626	51624					0.07505997639646012
QPINLIFRY	9	Unmodified	_QPINLIFRY_					0	0	0		ENSG00000182004|ENST00000414487|SNRPE	ENSG00000182004|ENST00000414487|SNRPE	ENSG00000182004|ENST00000414487|SNRPE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3323974609375	2	582.332216	1162.64988	-0.49845	-0.00029026	0.82858	0.00048251	0.33014	0.00019225	582.3326066741782	74.499	0.98103	75.058	74.717	75.698	0.55891					67	23	4	0	0	0	0.034856	3	8433	8422;8433;8445		115.46	62.108	1	3484500			45651	7417	30668	30681	51627;51628;51629	51628					0.07505997639646012
QPIQHVTGSM	10	Unmodified	_QPIQHVTGSM_					0	0	0			REV__ENSG00000204406|ENST00000642680|MBD5	REV__ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.2711181640625	2	549.274041	1096.53353	-0.21746	-0.00011945	-4.0786	-0.0022403	-4.2961	-0.0023597	549.2716639950368	43.633	0.67875	43.63	43.369	44.047	-0.002449					34	16	3	0	0	0	0.77314	1	3370	3370		40.778	4.3314	1	280700	+		45652	23489	30669	30682	51630	51630					-0.01087688922552843
QPKISLLCN	9	Unmodified	_QPKISLLCN_					0	0	0			REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2823791503906	2	508.283877	1014.5532	-0.12807	-6.5097E-05	-3.2333	-0.0016434	-3.3614	-0.0017085	508.28210982040144	21.685	0.90281	21.62	21.308	22.211	-0.064743					74	30	3	0	0	0	0.78536	1	674	674		29.15	3.6994	1	261030	+		45653	19807	30670	30683	51631	51631					0.04650687088201266
QPKLGNIPK	9	Unmodified	_QPKLGNIPK_					0	0	0		ENSG00000168454|ENST00000357775|TXNDC2;nc|ENSG00000168454|Q86VQ3-3|TXNDC2;nc|ENSG00000168454|Q86VQ3|TXNDC2	ENSG00000168454|ENST00000357775|TXNDC2	ENSG00000168454|ENST00000357775|TXNDC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.24517822265625	2	497.805834	993.597115	0.18528	9.2235E-05	-0.7067	-0.0003518	-0.52142	-0.00025956	497.8051912406174	20.247	0.27435	19.788	19.595	19.869	-0.4591					7	5	2	0	0	0	0.20789	1	604	604		15.642	5.3766	1	11782			45654	6402	30671	30684	51632	51632					0.1000603957684234
QPKLHRLVN	9	Unmodified	_QPKLHRLVN_					0	0	0			REV__ENST00000279392.7_1_16:30007232-30007604:-|nuORF	REV__ENST00000279392.7_1_16:30007232-30007604:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.833740234375	2	552.835457	1103.65636	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.021	1	84.087	83.587	84.587	0.066719								0	0	0	0.32469	1	8371	8371		21.96	0	1		+		45655	24601	30672	30685	51633	51633					0.10867935591022615
QPKLTIAVR	9	Unmodified	_QPKLTIAVR_					0	0	0			REV__ENSG00000198934|ENST00000361470|MAGEE1	REV__ENSG00000198934|ENST00000361470|MAGEE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.3272094726562	2	513.326934	1024.63931	0.83572	0.000429	-0.86541	-0.00044424	-0.029685	-1.5238E-05	513.326236894648	17.831	0.36691	17.349	17.192	17.559	-0.48256					20	7	4	0	0	0	0.44421	1	306	306		54.776	3.5836	1	291020	+		45656	23422	30673	30686	51634	51634					0.12798014985219197
QPKPKIKRASD	11	Unmodified	_QPKPKIKRASD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8785400390625	2	634.377686	1266.74082	-0.011361	-7.2071E-06	-0.68671	-0.00043563	-0.69807	-0.00044284	634.3770915186655	109.72	1.7775	109.72	109.29	111.07	0					117	70	2	0	0	0	0.7434	1	11414	11414		23.523	0	1	549070	+		45657	16363;28014	30674	30687	51635	51635					0.11811841617145546
QPKPKIKRASD	11	Unmodified	_QPKPKIKRASD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3756103515625	2	634.377686	1266.74082	1.3188	0.00083664	-1.7871	-0.0011337	-0.46828	-0.00029707	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.67778	2	13028	12748;13028		35.152	2.3396	1	12917000	+		45658	16363;28014	30674	30687	51636;51637	51637					0.11811841617145546
QPKPKIKRASD	11	Unmodified	_QPKPKIKRASD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.377197265625	2	634.377686	1266.74082	1.4899	0.00094515	-2.6111	-0.0016564	-1.1213	-0.0007113	634.3759288253121	109.92	1.3103	110.04	109.37	110.68	0.12289					100	52	2	0	0	0	0.68532	2	11829	11829;11837		33.922	2.2874	1	14976000	+		45659	16363;28014	30674	30687	51638;51639	51638					0.11811841617145546
QPKPKIKRASD	11	Unmodified	_QPKPKIKRASD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.376708984375	2	634.377686	1266.74082	1.4924	0.00094672	-3.038	-0.0019273	-1.5457	-0.00098054	634.3756362582708	111.65	0.59207	111.76	111.45	112.04	0.11118					53	17	5	0	0	0	0.67778	1	12016	12016		35.152	1.2304	1	27955000	+		45660	16363;28014	30674	30687	51640	51640					0.11811841617145546
QPKPKIKRASD	11	Unmodified	_QPKPKIKRASD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3765869140625	2	634.377686	1266.74082	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.47	1	114.53	114.03	115.03	0.061073								0	0	0	0.56276	1	12235	12235		38.754	5.9412	1		+		45661	16363;28014	30674	30687	51641	51641					0.11811841617145546
QPKPKIKRASD	11	Unmodified	_QPKPKIKRASD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.879150390625	2	634.377686	1266.74082	-1.1774	-0.00074689	0.2391	0.00015168	-0.93826	-0.00059521	634.3776925529805	109.87	1.6182	109.87	109.32	110.94	0.0060425					148	63	3	0	0	0	0.60058	2	11700	11700;11773		44.377	20.999	1	2778200	+		45662	16363;28014	30674	30687	51642;51643	51642					0.11811841617145546
QPKPKIKRASD	11	Unmodified	_QPKPKIKRASD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3767700195312	2	634.377686	1266.74082	2.1873	0.0013876	-2.6623	-0.0016889	-0.47502	-0.00030134	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.65746	3	13328	13321;13328;13428		37.812	3.6039	1	6886400	+		45663	16363;28014	30674	30687	51644;51645;51646	51645					0.11811841617145546
QPKPKIKRASD	11	Unmodified	_QPKPKIKRASD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	634.377686	1266.74082	-0.011361	-7.2071E-06	-0.68671	-0.00043563	-0.69807	-0.00044284	634.3770915186655	109.72	1.7775	109.72	109.29	111.07	0	-0.08253	0.00037479	NaN	44.377	117	70	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	549070	+		45664	16363;28014	30674	30687							0.11811841617145546
QPKPKIKRASD	11	Unmodified	_QPKPKIKRASD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	634.377686	1266.74082	-0.13805	-8.7576E-05	-0.064307	-4.0795E-05	-0.20236	-0.00012837	634.3771171892777	109.86	0.44304	109.81	109.68	110.12	-0.055077	0.0080406	0.0011645	NaN	44.377	51	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5538800	+		45665	16363;28014	30674	30687							0.11811841617145546
QPKPKIKRASD	11	Unmodified	_QPKPKIKRASD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	634.377686	1266.74082	2.8037	0.0017786	-3.2842	-0.0020834	-0.48052	-0.00030483	634.3754704981469	109.82	1.5056	109.79	109.5	111.01	-0.027641	-0.0096762	-0.0029208	NaN	44.377	100	54	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	389720	+		45666	16363;28014	30674	30687							0.11811841617145546
QPKPKIKRASD	11	Unmodified	_QPKPKIKRASD_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	634.377686	1266.74082	1.3159	0.00083475	-2.0128	-0.0012769	-0.69695	-0.00044213	634.3761223814594	109.85	1.4479	109.88	109.63	111.08	0.033096	0.079202	-0.0013077	NaN	44.377	91	54	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	754360	+		45667	16363;28014	30674	30687							0.11811841617145546
QPKRIFFGPI	10	Unmodified	_QPKRIFFGPI_					0	0	0		ENSG00000204479|ENST00000376098|PRAMEF17	ENSG00000204479|ENST00000376098|PRAMEF17	ENSG00000204479|ENST00000376098|PRAMEF17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.8585815429688	2	601.855858	1201.69716	1.0107	0.00060827	2.0733	0.0012478	3.0839	0.0018561	601.8569689467788	103.23	2.1882	103.41	103.08	105.27	0.18297					123	54	4	0	0	0	0.8488	1	10953	10953		17.365	0.89182	1	2928900			45668	8448	30675	30688	51647	51647					0.10438276910645072
QPKWPKLN	8	Unmodified	_QPKWPKLN_					0	0	0			REV__nc|ENSG00000205879|Q658T7-2|FAM90A2P	REV__nc|ENSG00000205879|Q658T7-2|FAM90A2P	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.210205078125	2	505.792727	1009.5709	0.75353	0.00038113	0.52253	0.00026429	1.2761	0.00064542	505.79276390599534	81.099	0.89596	81.598	81.176	82.072	0.49966					30	21	2	0	0	0	0.4196	1	9330	9330		6.3127	1.6309	1	85604	+		45669	21777	30676	30689	51648	51648					0.06649770405363142
QPLKAKTSL	9	Unmodified	_QPLKAKTSL_					0	0	0		nc|ENSG00000149476|Q3LXA3-2|TKFC;ENSG00000149476|ENST00000394900|TKFC;ENST00000530329.1_1_11:61112942-61113484:+|nuORF;ENST00000525366.5_1_11:61112846-61113972:+|nuORF	nc|ENSG00000149476|Q3LXA3-2|TKFC	nc|ENSG00000149476|Q3LXA3-2|TKFC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.30108642578125	2	493.305667	984.596781	0.71837	0.00035438	2.7181	0.0013408	3.4365	0.0016952	493.30719342237524	96.79	0.53764	97.181	96.905	97.443	0.39065					22	12	2	0	0	0	0.20789	1	11682	11682		26.693	0	1	125180			45670	5028	30677	30690	51649	51649					0.10386619857001733
QPLKEPSKPP	10	Unmodified	_QPLKEPSKPP_					0	0	0			REV__ENSG00000167978|ENST00000301740|SRRM2	REV__ENSG00000167978|ENST00000301740|SRRM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.81982421875	2	560.821681	1119.62881	-0.40201	-0.00022545	-2.9229	-0.0016392	-3.3249	-0.0018647	560.8199126084926	92.305	2.2839	92.767	91.977	94.26	0.46249					128	53	3	0	0	0	0.8651	1	11022	11022		25.574	0	1	273790	+		45671	21443	30678	30691	51650	51650					0.07377987540144204
QPLLALLLL	9	Unmodified	_QPLLALLLL_					0	0	0		ENSG00000130309|ENST00000252599|COLGALT1	ENSG00000130309|ENST00000252599|COLGALT1	ENSG00000130309|ENST00000252599|COLGALT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.28973388671875	2	497.338978	992.663404	-1.4595	-0.00072587	-1.4978	-0.00074489	-2.9573	-0.0014708	497.33801769776426	72.357	0.83335	72.742	72.084	72.917	0.38581					31	19	2	0	0	0	0.20789	1	7995	7995		38.806	0	1	129550			45672	3636	30679	30692	51651	51651					0.16677855418890886
QPLLPFFL	8	Unmodified	_QPLLPFFL_					0	0	0			REV__ENSG00000174004|ENST00000328557|NRROS	REV__ENSG00000174004|ENST00000328557|NRROS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.78973388671875	2	487.789121	973.56369	-0.085708	-4.1808E-05	2.9393	0.0014338	2.8536	0.001392	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.82464	1	8016	8016		21.702	0	1	514950	+		45673	21968	30680	30693	51652	51652					0.0758503780494948
QPLNINDSL	9	Unmodified	_QPLNINDSL_					0	0	0			REV__nc|ENSG00000077279|O43602-2|DCX	REV__nc|ENSG00000077279|O43602-2|DCX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.26641845703125	2	507.266739	1012.51892	1.6734	0.00084884	0.0061956	3.1428E-06	1.6796	0.00085198	507.2673076437526	51.086	1.1107	51.838	51.491	52.601	0.75174					45	26	3	0	0	0	0.51307	1	5093	5093		51.335	3.6781	1	1853200	+		45674	16744	30681	30694	51653	51653					0.013165622009523759
QPLPLYGEV	9	Unmodified	_QPLPLYGEV_					0	0	0			REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|99|1|anti-sense	REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|99|1|anti-sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.27520751953125	2	508.276575	1014.5386	-0.35401	-0.00017994	-3.9158	-0.0019903	-4.2698	-0.0021703	508.27456407429634	31.882	0.59818	32.008	31.691	32.289	0.12642					27	13	3	0	0	0	0.78536	1	2195	2195		29.15	1.2673	1	153330	+		45675	29431	30682	30695	51654	51654					0.03190938211707817
QPLPRTPA	8	Unmodified	_QPLPRTPA_					0	0	0		ENSG00000198142|ENST00000356454|SOWAHC	ENSG00000198142|ENST00000356454|SOWAHC	ENSG00000198142|ENST00000356454|SOWAHC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2557373046875	2	440.255977	878.497401	-1.055	-0.00046445	-0.316	-0.00013912	-1.371	-0.00060357	440.255692333896	66.85	0.64691	66.903	66.553	67.2	0.052376					60	27	3	0	0	0	0.84341	1	5930	5930		24.203	0	1	260280			45676	8244	30683	30696	51655	51655					0.05329221962892916
QPLRHPTRA	9	Unmodified	_QPLRHPTRA_					0	0	0		nc|ENSG00000159753|Q6F5E8-2|CARMIL2;ENSG00000159753|ENST00000334583|CARMIL2	nc|ENSG00000159753|Q6F5E8-2|CARMIL2	nc|ENSG00000159753|Q6F5E8-2|CARMIL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.8013305664062	2	538.309606	1074.60466	-0.34577	-0.00018613	-4.1334	-0.0022251	-4.4792	-0.0024112	538.3071936306642	19.416	0.67815	18.787	18.444	19.122	-0.62961					22	14	2	0	0	0	0.20789	1	481	481		2.5243	0	1	88680			45677	5546	30684	30697	51656	51656					0.07034191897128039
QPLRLVPIFFA	11	Unmodified	_QPLRLVPIFFA_					0	0	0		ENST00000413393.5_1_18:32720390-32720513:+|nuORF	ENST00000413393.5_1_18:32720390-32720513:+|nuORF	ENST00000413393.5_1_18:32720390-32720513:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.70941162109375	3	434.264053	1299.77033	0.52845	0.00022949	2.6639	0.0011568	3.1923	0.0013863	434.2655659589493	19.466	0.41279	18.996	18.7	19.113	-0.46967					10	8	2	0	0	0	0.17305	1	489	489		24.232	0	1	27981			45678	11352	30685	30698	51657	51657					0.1324340563323858
QPLRRGEPV	9	Unmodified	_QPLRRGEPV_					0	0	0			REV__ENSG00000170631|ENST00000394909|ZNF16	REV__ENSG00000170631|ENST00000394909|ZNF16	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.906005859375	2	526.30399	1050.59343	-0.12333	-6.491E-05	3.7924	0.0019959	3.669	0.001931	526.305839838568	28.158	0.50893	28.061	27.752	28.261	-0.096947					21	11	3	0	0	0	0.20752	1	1670	1670		63.306	0	1	123690	+		45679	21678	30686	30699	51658	51658					0.07015369802979876
QPLTSDIY	8	Unmodified	_QPLTSDIY_					0	0	0			REV__ENSG00000157445|ENST00000474759|CACNA2D3	REV__ENSG00000157445|ENST00000474759|CACNA2D3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.7376708984375	2	468.737283	935.460012	-0.37768	-0.00017703	-0.043974	-2.0612E-05	-0.42165	-0.00019764	468.737234211537	74.535	0.47767	74.491	74.257	74.734	-0.043877					27	15	2	0	0	0	0.884	1	7321	7321		33.516	1.5607	1	48688	+		45680	20544	30687	30700	51659	51659					-0.010299140933852868
QPLTVLNSFH	10	Unmodified	_QPLTVLNSFH_					0	0	0			REV__ENST00000477542.5_1_3:48415047-48423401:+|nuORF	REV__ENST00000477542.5_1_3:48415047-48423401:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3139038085938	2	578.31148	1154.60841	-0.77198	-0.00044645	4.4868	0.0025948	3.7148	0.0021483	578.3136706003854	71.013	1.0632	71.013	70.76	71.823	0					93	49	3	0	0	0	0.8651	1	6327	6327		25.574	1.3713	1	146110	+		45681	21015	30688	30701	51660	51660					0.03728816880334307
QPMEVQEGY	9	Unmodified	_QPMEVQEGY_					0	0	0		ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28;ENSG00000130726|ENST00000253024|TRIM28	ENST00000601150.5_1_19:59059168-59060232:+|nuORF	ENST00000601150.5_1_19:59059168-59060232:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.736572265625	2	540.736957	1079.45936	-0.57335	-0.00031003	0.53726	0.00029052	-0.036088	-1.9514E-05	540.7370790226233	49.509	0.61328	49.969	49.665	50.278	0.45983					33	14	3	0	0	0	0.21969	1	4830	4830		71.877	15.156	1	1003100			45682	3673	30689	30702	51661	51661					-0.07719076804710312
QPMEVQEGY	9	Unmodified	_QPMEVQEGY_					0	0	0		ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28;ENSG00000130726|ENST00000253024|TRIM28	ENST00000601150.5_1_19:59059168-59060232:+|nuORF	ENST00000601150.5_1_19:59059168-59060232:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.7379760742188	2	540.736957	1079.45936	0.1601	8.6573E-05	-0.29118	-0.00015745	-0.13108	-7.088E-05	540.7366588769921	49.383	0.60782	50.228	49.869	50.477	0.845					32	14	3	0	0	0	0.12688	2	4817	4817;4828		87.696	39.781	1	1018500			45683	3673	30689	30702	51662;51663	51662					-0.07719076804710312
QPMKVLAL	8	Unmodified	_QPMKVLAL_					0	0	0		chr7:56073111-56074593|13|17.23|0.31|5.81|+|0|SUMF2,None|1	chr7:56073111-56074593|13|17.23|0.31|5.81|+|0|SUMF2,None|1	chr7:56073111-56074593|13|17.23|0.31|5.81|+|0|SUMF2,None|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7574768066406	2	450.272781	898.531009	0.45205	0.00020354	3.9656	0.0017856	4.4176	0.0019891	450.2744889255376	81.99	1.5437	81.927	81.429	82.973	-0.062943					97	35	3	0	0	0	0.4196	1	8328	8328		44.531	24.049	1	484120			45684	502	30690	30703	51664	51664					0.07768507410446546
QPNTTTWPPP	10	Unmodified	_QPNTTTWPPP_					0	0	0			REV__ENST00000565120.1_1_17:42015742-42016079:+|nuORF	REV__ENST00000565120.1_1_17:42015742-42016079:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.778076171875	2	569.780013	1137.54547	-0.34656	-0.00019746	-3.0575	-0.0017421	-3.404	-0.0019396	569.7780779655194	23.853	0.60036	23.908	23.63	24.23	0.055487					40	15	3	0	0	0	0.86348	1	848	848		31.53	3.4483	1	132980	+		45685	28848	30691	30704	51665	51665					-0.017797489077111095
QPNTTTWPPP	10	Unmodified	_QPNTTTWPPP_					0	0	0			REV__ENST00000565120.1_1_17:42015742-42016079:+|nuORF	REV__ENST00000565120.1_1_17:42015742-42016079:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.77880859375	2	569.780013	1137.54547	-0.21256	-0.00012111	-3.1984	-0.0018224	-3.411	-0.0019435	569.7780484096427	24.183	0.84634	24.137	23.831	24.677	-0.04598					35	18	3	0	0	0	0.8608	1	949	949		34.173	1.3601	1	164760	+		45686	28848	30691	30704	51666	51666					-0.017797489077111095
QPPDGVLAS	9	Unmodified	_QPPDGVLAS_					0	0	0		nc|ENSG00000180264|Q7Z7M1|ADGRD2;ENSG00000180264|ENST00000696331|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2408142089844	2	442.229625	882.444697	1.2832	0.00056747	-2.6209	-0.001159	-1.3377	-0.00059155	442.2283876532701	81.307	0.38651	81.364	81.128	81.514	0.057808					10	8	2	0	0	0	0.20789	1	8115	8115		49.442	3.4896	1	20832			45687	15130	30692	30705	51667	51667					-0.0012278089056962926
QPPECEHH	8	Unmodified	_QPPECEHH_					0	0	0			REV__ENST00000525238.2_1_19:1041360-1041637:+|nuORF	REV__ENST00000525238.2_1_19:1041360-1041637:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7009582519531	2	488.700709	975.386864	-1.615	-0.00078926	-3.2888	-0.0016073	-4.9039	-0.0023965	488.6989401683685	89.871	0.58656	90.341	90.015	90.601	0.47068					26	15	2	0	0	0	0.90465	1	10662	10662		40.573	8.6178	1	617950	+		45688	28179	30693	30706	51668	51668					-0.10181366087647348
QPPECEHH	8	Unmodified	_QPPECEHH_					0	0	0			REV__ENST00000525238.2_1_19:1041360-1041637:+|nuORF	REV__ENST00000525238.2_1_19:1041360-1041637:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	488.700709	975.386864	0.69838	0.0003413	-6.1631	-0.0030119	-5.4647	-0.0026706	488.69785751148595	90.429	0.45361	90.583	90.345	90.799	0.15388	0.070003	-0.0021195	NaN	40.573	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110330	+		45689	28179	30693	30706							-0.10181366087647348
QPPECEHH	8	Unmodified	_QPPECEHH_					0	0	0			REV__ENST00000525238.2_1_19:1041360-1041637:+|nuORF	REV__ENST00000525238.2_1_19:1041360-1041637:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	488.700709	975.386864	-1.6518	-0.00080722	-3.7313	-0.0018235	-5.383	-0.0026307	488.6988588657558	90.438	0.49037	90.614	90.384	90.874	0.1758	0.10134	0.0002574	NaN	40.573	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80811	+		45690	28179	30693	30706							-0.10181366087647348
QPPECEHH	8	Unmodified	_QPPECEHH_					0	0	0			REV__ENST00000525238.2_1_19:1041360-1041637:+|nuORF	REV__ENST00000525238.2_1_19:1041360-1041637:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	488.700709	975.386864	-1.615	-0.00078926	-3.2888	-0.0016073	-4.9039	-0.0023965	488.6989401683685	89.871	0.58656	90.341	90.015	90.601	0.47068	-0.17134	0.00068984	NaN	40.573	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	617950	+		45691	28179	30693	30706							-0.10181366087647348
QPPFVFIP	8	Unmodified	_QPPFVFIP_					0	0	0		ENST00000528821.5_1_12:16111260-16112816:+|nuORF	ENST00000528821.5_1_12:16111260-16112816:+|nuORF	ENST00000528821.5_1_12:16111260-16112816:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7670593261719	2	472.765646	943.516739	0.74188	0.00035074	2.6918	0.0012726	3.4337	0.0016233	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.89457	1	8762	8762		37.028	5.0736	1	547170			45692	13314	30694	30707	51669	51669					0.04272178253813763
QPPIVFPF	8	Unmodified	_QPPIVFPF_					0	0	0			REV__ENST00000457307.1_1_20:43994210-43995752:+|nuORF	REV__ENST00000457307.1_1_20:43994210-43995752:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.767333984375	2	472.765646	943.516739	-0.93004	-0.00043969	4.2224	0.0019962	3.2924	0.0015565	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.89457	1	8233	8233		37.028	1.4102	1	526610	+		45693	26966	30695	30708	51670	51670					0.042721782538023945
QPPKKVSRVQV	11	Unmodified	_QPPKKVSRVQV_					0	0	0		ENSG00000074657|ENST00000591808|ZNF532;ENST00000394628.2_1_10:79492006-79493143:+|nuORF	ENSG00000074657|ENST00000591808|ZNF532;ENST00000394628.2_1_10:79492006-79493143:+|nuORF	ENSG00000074657|ENST00000591808|ZNF532	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.8831176757812	2	633.388054	1264.76155	-0.76688	-0.00048573	-3.4759	-0.0022016	-4.2427	-0.0026873	633.3857297307702	51.44	1.7579	51.44	50.814	52.572	0					77	46	2	0	0	0	0.71921	1	4209	4209		38.754	15.231	1	76099			45694	1311;11071	30696	30709	51671	51671					0.13976431996798055
QPPKPGAL	8	Unmodified	_QPPKPGAL_					0	0	0		ENST00000436129.2_1_20:60551226-60583162:-|nuORF;ENSG00000130699|ENST00000252996|TAF4	ENST00000436129.2_1_20:60551226-60583162:-|nuORF	ENST00000436129.2_1_20:60551226-60583162:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.23944091796875	2	404.239796	806.465038	-1.2359	-0.00049958	1.1294	0.00045654	-0.10647	-4.304E-05	404.24012345369397	41.924	0.94381	41.886	41.614	42.558	-0.038223					48	22	3	0	0	0	0.92176	1	3183	3183		46.766	2.2354	1	693430			45695	3666	30697	30710	51672	51672					0.05406434559904483
QPPKPGAL	8	Unmodified	_QPPKPGAL_					0	0	0		ENST00000436129.2_1_20:60551226-60583162:-|nuORF;ENSG00000130699|ENST00000252996|TAF4	ENST00000436129.2_1_20:60551226-60583162:-|nuORF	ENST00000436129.2_1_20:60551226-60583162:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.23931884765625	2	404.239796	806.465038	1.3717	0.0005545	-1.3722	-0.00055472	-0.00052774	-2.1333E-07	404.23906319895127	41.92	0.99368	41.923	41.545	42.539	0.0034142					50	23	3	0	0	0	0.94132	1	3126	3126		54.765	7.9982	1	778700			45696	3666	30697	30710	51673	51673					0.05406434559904483
QPPKPGAL	8	Unmodified	_QPPKPGAL_					0	0	0		ENST00000436129.2_1_20:60551226-60583162:-|nuORF;ENSG00000130699|ENST00000252996|TAF4	ENST00000436129.2_1_20:60551226-60583162:-|nuORF	ENST00000436129.2_1_20:60551226-60583162:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	404.239796	806.465038	-1.8553	-0.00075	1.8874	0.00076296	0.032059	1.296E-05	404.24043620467006	41.799	0.83179	41.799	41.477	42.309	0	-0.088319	0.0012057	NaN	46.766	34	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	244940			45697	3666	30697	30710							0.05406434559904483
QPPKPGAL	8	Unmodified	_QPPKPGAL_					0	0	0		ENST00000436129.2_1_20:60551226-60583162:-|nuORF;ENSG00000130699|ENST00000252996|TAF4	ENST00000436129.2_1_20:60551226-60583162:-|nuORF	ENST00000436129.2_1_20:60551226-60583162:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	404.239796	806.465038	0.2031	8.21E-05	-1.0308	-0.00041667	-0.82766	-0.00033457	404.23965787553976	41.891	0.41642	41.965	41.708	42.124	0.073414	0.077178	-0.0011535	NaN	46.766	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71956			45698	3666	30697	30710							0.05406434559904483
QPPKPGAL	8	Unmodified	_QPPKPGAL_					0	0	0		ENST00000436129.2_1_20:60551226-60583162:-|nuORF;ENSG00000130699|ENST00000252996|TAF4	ENST00000436129.2_1_20:60551226-60583162:-|nuORF	ENST00000436129.2_1_20:60551226-60583162:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	404.239796	806.465038	-0.28898	-0.00011682	0.13832	5.5916E-05	-0.15065	-6.09E-05	404.23965401828633	41.84	0.68522	41.794	41.588	42.273	-0.045471	-0.09341	-0.00020835	NaN	46.766	20	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66004			45699	3666	30697	30710							0.05406434559904483
QPPKSFPLHP	10	Unmodified	_QPPKSFPLHP_					0	0	0		ENSG00000182791|ENST00000333861|CCDC87	ENSG00000182791|ENST00000333861|CCDC87	ENSG00000182791|ENST00000333861|CCDC87	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3192749023438	2	574.316566	1146.61858	2.1223	0.0012189	2.8994	0.0016652	5.0218	0.0028841	574.3181422905453	94.479	4.1031	94.419	93.372	97.475	-0.059204					230	96	5	0	0	0	0.86348	1	10141	10141		31.53	3.6476	1	1734300			45700	7473	30698	30711	51674	51674					0.05113424605565342
QPPLSTVQ	8	Unmodified	_QPPLSTVQ_					0	0	0		ENSG00000250673|ENST00000623665|REELD1	ENSG00000250673|ENST00000623665|REELD1	ENSG00000250673|ENST00000623665|REELD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.8818359375	2	435.239993	868.465432	-1.6571	-0.00072124	0.33649	0.00014645	-1.3206	-0.00057479	435.23984159553964	27.859	0.13247	27.928	27.853	27.986	0.06868					9	6	2	0	0	0	0.4196	1	1125	1125		26.693	10.22	1	21853			45701	8849	30699	30712	51675	51675					0.025938094890875618
QPPLSTVQ	8	Unmodified	_QPPLSTVQ_					0	0	0		ENSG00000250673|ENST00000623665|REELD1	ENSG00000250673|ENST00000623665|REELD1	ENSG00000250673|ENST00000623665|REELD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	435.239993	868.465432	-0.35291	-0.0001536	0.84519	0.00036786	0.49228	0.00021426	435.2400261287417	27.638	0.76184	27.599	27.213	27.975	-0.038523	-0.1577	0.00075076	NaN	19.997	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36672			45702	8849	30699	30712							0.025938094890875618
QPPLSTVQ	8	Unmodified	_QPPLSTVQ_					0	0	0		ENSG00000250673|ENST00000623665|REELD1	ENSG00000250673|ENST00000623665|REELD1	ENSG00000250673|ENST00000623665|REELD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	435.239993	868.465432	1.8411	0.00080132	-1.0596	-0.00046118	0.78151	0.00034014	435.2392892494148	27.768	0.84978	27.744	27.313	28.163	-0.023556	-0.012957	-0.00090731	NaN	19.997	26	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22930			45703	8849	30699	30712							0.025938094890875618
QPPPLPSH	8	Unmodified	_QPPPLPSH_					0	0	0			REV__ENSG00000043462|ENST00000046794|LCP2	REV__ENSG00000043462|ENST00000046794|LCP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7637634277344	2	436.734877	871.455202	0.48053	0.00020986	0.084914	3.7085E-05	0.56544	0.00024695	436.73471933821213	26.1	0.75668	26.146	25.878	26.635	0.045509					35	20	3	0	0	0	0.4196	1	1087	1087		42.474	14.22	1	95053	+		45704	16337	30700	30713	51676	51676					0.014332465545066952
QPPPPPQRLV	10	Unmodified	_QPPPPPQRLV_					0	0	0		ENSG00000186193|ENST00000409687|SAPCD2	ENSG00000186193|ENST00000409687|SAPCD2	ENSG00000186193|ENST00000409687|SAPCD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.8101806640625	2	564.82984	1127.64513	0.055911	3.158E-05	1.8021	0.0010179	1.858	0.0010494	565.3338299771594	46.946	0.18329	46.858	46.783	46.966	-0.087646					5	4	2	0	0	0	0.37624	1	3483	3483		20.947	2.6225	1	66047			45705	7784	30701	30714	51677	51677					0.08641113496878461
QPPPQQSQ	8	Unmodified	_QPPPQQSQ_					0	0	0		nc|ENSG00000065970|Q9P0K8-2|FOXJ2;ENSG00000065970|ENST00000162391|FOXJ2	nc|ENSG00000065970|Q9P0K8-2|FOXJ2	nc|ENSG00000065970|Q9P0K8-2|FOXJ2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.9408874511719	2	455.224874	908.435195	0.01973	8.9816E-06	-0.087825	-3.998E-05	-0.068095	-3.0998E-05	455.22465061699637	20.331	0.63249	19.702	19.443	20.076	-0.62961					25	13	3	0	0	0	0.4196	1	668	668		15.642	4.7763	1	89527			45706	1146	30702	30715	51678	51678					-0.022685491760853438
QPPPTPQP	8	Unmodified	_QPPPTPQP_					0	0	0		nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379|BAG6;ENSG00000204463|ENST00000676615|BAG6;ENST00000465348.5_1_6:31610527-31611963:-|nuORF	nc|ENSG00000204463|P46379-5|BAG6	nc|ENSG00000204463|P46379-5|BAG6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2273254394531	2	431.226885	860.439217	0.2459	0.00010604	0.35379	0.00015256	0.59969	0.0002586	431.22697269182805	25.663	1.9834	25.406	24.638	26.622	-0.25721					115	44	5	0	0	0	0.42407	1	1325	1325		79.451	2.6769	1	5038700			45707	8445	30703	30716	51679	51679					0.0034154031761772785
QPPPTPQP	8	Unmodified	_QPPPTPQP_					0	0	0		nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379|BAG6;ENSG00000204463|ENST00000676615|BAG6;ENST00000465348.5_1_6:31610527-31611963:-|nuORF	nc|ENSG00000204463|P46379-5|BAG6	nc|ENSG00000204463|P46379-5|BAG6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.22711181640625	2	431.226885	860.439217	2.9201	0.0012592	-2.3558	-0.0010159	0.56433	0.00024335	431.2258144078327	25.682	2.586	25.25	24.227	26.813	-0.4311					128	58	4	0	0	0	0.42407	3	1351	1351;1363;1375		79.451	2.6769	1	5689000			45708	8445	30703	30716	51680;51681;51682	51680					0.0034154031761772785
QPPQLRLKKAT	11	Unmodified	_QPPQLRLKKAT_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3915405273438	2	640.395879	1278.7772	-0.0023581	-1.5101E-06	-4.369	-0.0027979	-4.3714	-0.0027994	640.3930794229678	53.7	0.84142	53.695	53.277	54.118	-0.0053711					48	20	3	0	0	0	0.75921	1	4682	4682		19.997	0.89325	1	158160	+		45709	24255	30704	30717	51683	51683					0.14896718513841734
QPPRKWFG	8	Unmodified	_QPPRKWFG_					0	0	0			REV__ENSG00000107771|ENST00000372088|CCSER2	REV__ENSG00000107771|ENST00000372088|CCSER2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.81158447265625	2	508.277244	1014.53993	-0.69685	-0.00035419	-0.064642	-3.2856E-05	-0.7615	-0.00038705	508.7771155663239	43.663	0.23633	44.113	43.963	44.2	0.45024					10	5	3	0	0	0	0.4196	1	3973	3973		19.36	0	1	276790	+		45710	17673	30705	30718	51684	51684					0.033246170911411355
QPPSPPDDFSC	11	Unmodified	_QPPSPPDDFSC_					0	0	0		ENSG00000163659|ENST00000295924|TIPARP	ENSG00000163659|ENST00000295924|TIPARP	ENSG00000163659|ENST00000295924|TIPARP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	595.2410278320312	2	595.245146	1188.47574	-0.77427	-0.00046088	-3.9519	-0.0023523	-4.7261	-0.0028132	595.2425877787755	64.821	0.56484	64.821	64.585	65.15	0					52	23	3	0	0	0	0.70737	1	5708	5708		30.318	1.1477	1	217320			45711	5849	30706	30719	51685	51685					-0.11095995638629574
QPPTKWPTISK	11	Unmodified	_QPPTKWPTISK_					0	0	0			REV__ENSG00000205593|ENST00000413817|DENND6B	REV__ENSG00000205593|ENST00000413817|DENND6B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8598022460938	2	641.861338	1281.70812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.2	1	119.13	118.63	119.63	-0.07531								0	0	0	0.56276	1	12785	12785		11.636	1.9303	1		+		45712	23566	30707	30720	51686	51686					0.0785363449426768
QPQAQQFPDT	10	Unmodified	_QPQAQQFPDT_					0	0	0			REV__ENSG00000248713|ENST00000511828|C4orf54	REV__ENSG00000248713|ENST00000511828|C4orf54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.7738647460938	2	580.272552	1158.53055	-0.15063	-8.7406E-05	2.6988	0.001566	2.5481	0.0014786	580.2740461045067	22.753	0.717	22.142	21.952	22.669	-0.6107					24	17	2	0	0	0	0.80179	1	978	978		39.253	8.7492	1	88756	+		45713	23860	30708	30721	51687	51687					-0.04237240775705686
QPQAQQFPDT	10	Unmodified	_QPQAQQFPDT_					0	0	0			REV__ENSG00000248713|ENST00000511828|C4orf54	REV__ENSG00000248713|ENST00000511828|C4orf54	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	580.272552	1158.53055	-0.4185	-0.00024284	2.8326	0.0016437	2.4141	0.0014008	580.2737474993621	22.717	0.58248	22.298	22.105	22.687	-0.41879	0.078268	7.3265E-05	NaN	39.253	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66897	+		45714	23860	30708	30721							-0.04237240775705686
QPQAQQFPDT	10	Unmodified	_QPQAQQFPDT_					0	0	0			REV__ENSG00000248713|ENST00000511828|C4orf54	REV__ENSG00000248713|ENST00000511828|C4orf54	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	580.272552	1158.53055	-0.15063	-8.7406E-05	2.6988	0.001566	2.5481	0.0014786	580.2740461045067	22.753	0.717	22.142	21.952	22.669	-0.6107	-0.078268	-8.2012E-05	NaN	39.253	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88756	+		45715	23860	30708	30721							-0.04237240775705686
QPQHLEEGAE	10	Unmodified	_QPQHLEEGAE_					0	0	0			REV__ENST00000331238.6_1_17:1840018-1840207:-|nuORF	REV__ENST00000331238.6_1_17:1840018-1840207:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.2672119140625	2	569.262185	1136.50982	0.62123	0.00035364	-0.52151	-0.00029687	0.099721	5.6767E-05	569.2617447002226	18.026	0.37154	17.544	17.374	17.745	-0.48163					19	7	3	0	0	0	0.86471	1	351	351		30.318	0	1	123260	+		45716	25120	30709	30722	51688	51688					-0.05297831155394306
QPQHVAPP	8	Unmodified	_QPQHVAPP_					0	0	0			REV__ENST00000595922.1_1_19:14920751-14945989:-|nuORF	REV__ENST00000595922.1_1_19:14920751-14945989:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.60205078125	2	437.232502	872.450451	-1.6673	-0.00072901	3.8477	0.0016823	2.1804	0.00095332	437.2340423713293	54.732	0.1455	54.732	54.618	54.763	0					9	5	2	0	0	0	0.4196	1	4609	4609		20.482	0	1	49705	+		45717	29253	30710	30723	51689	51689					0.009123624117592044
QPQNPFLLNQ	10	Unmodified	_QPQNPFLLNQ_					0	0	0			REV__ENSG00000185008|ENST00000696593|ROBO2	REV__ENSG00000185008|ENST00000696593|ROBO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2112121582031	3	400.212017	1197.61422	0.24894	9.963E-05	-2.2797	-0.00091238	-2.0308	-0.00081275	400.21103835206276	22.75	0.72043	22.139	21.71	22.43	-0.6107					42	17	3	0	0	0	0.78666	1	926	926		40.058	4.9061	1	157820	+		45718	22725	30711	30724	51690	51690					0.023319153920056124
QPQRENVLQ	9	Unmodified	_QPQRENVLQ_					0	0	0			REV__ENSG00000079462|ENST00000262890|PAFAH1B3	REV__ENSG00000079462|ENST00000262890|PAFAH1B3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.2950439453125	2	556.296362	1110.57817	0.020707	1.1519E-05	3.7421	0.0020817	3.7628	0.0020932	556.2982403934259	75.405	0.62208	75.8	75.574	76.196	0.39507					30	14	3	0	0	0	0.58668	1	8539	8539		47.657	3.5405	1	508580	+		45719	16786	30712	30725	51691	51691					0.027304582151373324
QPRAPSPLGP	10	Unmodified	_QPRAPSPLGP_					0	0	0			REV__ENST00000340170.8_1_22:19318642-19338944:-|nuORF	REV__ENST00000340170.8_1_22:19318642-19338944:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.28424072265625	2	510.285266	1018.55598	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.74	1	107.85	107.35	108.35	0.11715								0	0	0	0.45132	1	13175	13175		34.173	0.65696	1		+		45720	25241	30713	30726	51692	51692					0.04744278537373248
QPRETLLLPGK	11	Unmodified	_QPRETLLLPGK_					0	0	0		ENST00000336314.8_2_5:154194204-154194450:+|nuORF	ENST00000336314.8_2_5:154194204-154194450:+|nuORF	ENST00000336314.8_2_5:154194204-154194450:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.9219970703125	3	417.918834	1250.73467	4.0685	0.0017003	4.0974	0.0017124	8.1659	0.0034127	417.9204504044182	105.51	2.6111	105.69	104.89	107.5	0.18647					199	86	4	0	0	0	0.76699	1	12909	12909		16.53	4.5975	1	601650			45721	10172	30714	30727	51693	51693					0.11933323385619587
QPRGFLLVP	9	Unmodified	_QPRGFLLVP_					0	0	0			REV__nc|ENSG00000134215|Q9UKW4-2|VAV3	REV__nc|ENSG00000134215|Q9UKW4-2|VAV3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8088989257812	2	513.808377	1025.6022	-0.38547	-0.00019806	1.7192	0.00088333	1.3337	0.00068527	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.7932	1	3907	3907		18.324	0.95945	1	1377600	+		45722	19121	30715	30728	51694	51694					0.0904234343945518
QPRILAEA	8	Unmodified	_QPRILAEA_					0	0	0		ENST00000361524.7_1_18:22805794-22805878:-|nuORF	ENST00000361524.7_1_18:22805794-22805878:-|nuORF	ENST00000361524.7_1_18:22805794-22805878:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2599792480469	2	449.261259	896.507966	-0.031705	-1.4244E-05	-1.4161	-0.00063622	-1.4478	-0.00065046	449.26046135217877	71.325	1.0336	71.873	71.284	72.317	0.54756					58	24	3	0	0	0	0.87479	1	7996	7996		30.504	1.3336	1	1233100			45723	10481	30716	30729	51695	51695					0.05557204617332445
QPRIVKVINKL	11	Unmodified	_QPRIVKVINKL_					0	0	0			REV__nc|ENSG00000185046|Q7Z6G8-6|ANKS1B	REV__nc|ENSG00000185046|Q7Z6G8-6|ANKS1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.62139892578125	3	436.62224	1306.84489	0.31417	0.00013717	-2.3209	-0.0010133	-2.0067	-0.00087617	436.62114528618645	20.352	0.976	19.723	19.397	20.373	-0.6296					57	21	4	0	0	0	0.76892	1	640	640		17.833	0.6664	1	358780	+		45724	22733	30717	30730	51696	51696					0.20374168444664065
QPRKVRPKRR	10	Unmodified	_QPRKVRPKRR_					0	0	0			REV__ENSG00000140943|ENST00000343411|MBTPS1	REV__ENSG00000140943|ENST00000343411|MBTPS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.26861572265625	3	440.953094	1319.83745	-1.4745	-0.00065017	-0.56442	-0.00024888	-2.0389	-0.00089905	440.9525590784658	66.908	0.63004	67.042	66.795	67.425	0.13326					36	26	2	0	0	0	0.37624	1	5965	5965		20.03	14.029	1	86240	+		45725	19649	30718	30731	51697	51697					0.19032873687569918
QPRLLFSFQP	10	Unmodified	_QPRLLFSFQP_					0	0	0			REV__ENSG00000215529|ENST00000400522|EFCAB8	REV__ENSG00000215529|ENST00000400522|EFCAB8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.564453125	3	411.564391	1231.67134	1.4449	0.00059468	-0.75709	-0.00031159	0.68783	0.00028309	411.56397549775096	18.737	0.52581	18.26	18.03	18.556	-0.47694					23	11	3	0	0	0	0.74383	1	426	426		42.338	6.0204	1	315510	+		45726	23687	30719	30732	51698	51698					0.06477382668390419
QPRRLVRFV	9	Unmodified	_QPRRLVRFV_					0	0	0			REV__nc|ENSG00000257524|Q969X2-2|ST6GALNAC6	REV__nc|ENSG00000257524|Q969X2-2|ST6GALNAC6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.866455078125	2	585.864549	1169.71454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.111	1	24.68	24.18	25.18	-0.4311								0	0	0	0.31828	1	1275	1275		24.203	1.6231	1		+		45727	20717	30720	30733	51699	51699					0.13647617236301812
QPRSPVPS	8	Unmodified	_QPRSPVPS_					0	0	0		ENSG00000167978|ENST00000301740|SRRM2;nc|ENSG00000167978|Q9UQ35-2|SRRM2;ENST00000574593.1_1_16:2817540-2819884:+|nuORF	ENSG00000167978|ENST00000301740|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801208496094	2	434.237784	866.461016	-0.96684	-0.00041984	-1.5514	-0.00067369	-2.5183	-0.0010935	434.23734814261456	36.971	0.39875	36.917	36.739	37.137	-0.053555					11	8	2	0	0	0	0.4196	1	2500	2500		25.45	0	1	12838			45728	6348	30721	30734	51700	51700					0.02244345066196729
QPRVFKLVLLG	11	Unmodified	_QPRVFKLVLLG_					0	0	0		ENST00000416106.1_1_2:238494070-238499247:-|nuORF;ENSG00000124839|ENST00000264601|RAB17	ENST00000416106.1_1_2:238494070-238499247:-|nuORF	ENST00000416106.1_1_2:238494070-238499247:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	635.4075927734375	2	635.405715	1268.79688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.834	1	15.892	15.392	16.392	0.057872								0	0	0	0.56276	1	81	81		14.865	0	1				45729	3366	30722	30735	51701	51701					0.17323094524590488
QPSATVRLHA	10	Unmodified	_QPSATVRLHA_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024146	REV__CON__ENSEMBL:ENSBTAP00000024146	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.3015747070312	2	540.301447	1078.58834	1.2647	0.0006833	0.36451	0.00019695	1.6292	0.00088025	540.301492421599	24.294	0.65065	23.781	23.494	24.144	-0.51365					30	14	3	0	0	0	0.44803	1	1157	1157		60.118	7.1816	1	313710	+	+	45730	15963	30723	30736	51702	51702					0.05219065940377732
QPSATVRLHA	10	Unmodified	_QPSATVRLHA_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024146	REV__CON__ENSEMBL:ENSBTAP00000024146	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	540.301447	1078.58834	0.044559	2.4075E-05	2.548	0.0013767	2.5926	0.0014008	540.3021594373678	24.358	0.8342	23.976	23.407	24.241	-0.38178	0.097539	0.0022128	NaN	60.118	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211490	+	+	45731	15963	30723	30736							0.05219065940377732
QPSATVRLHA	10	Unmodified	_QPSATVRLHA_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024146	REV__CON__ENSEMBL:ENSBTAP00000024146	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	540.301447	1078.58834	1.2647	0.0006833	0.36451	0.00019695	1.6292	0.00088025	540.301492421599	24.294	0.65065	23.781	23.494	24.144	-0.51365	-0.097539	-0.00014673	NaN	60.118	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	313710	+	+	45732	15963	30723	30736							0.05219065940377732
QPSCQQIV	8	Unmodified	_QPSCQQIV_					0	0	0		nc|ENSG00000107443|Q5T5M9-2|CCNJ;nc|ENSG00000107443|Q5T5M9|CCNJ;ENSG00000107443|ENST00000465148|CCNJ	nc|ENSG00000107443|Q5T5M9-2|CCNJ	nc|ENSG00000107443|Q5T5M9-2|CCNJ	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7459716796875	2	451.723652	901.432752	-0.61879	-0.00027952	-2.3399	-0.001057	-2.9587	-0.0013365	451.72214603561815	34.866	0.46116	34.809	34.585	35.047	-0.056381					15	10	2	0	0	0	0.4196	1	2200	2200		38.806	0	1	14952			45733	2345	30724	30737	51703	51703					-0.02190720905400667
QPSDMYPN	8	Unmodified	_QPSDMYPN_					0	0	0			REV__ENSG00000120265|ENST00000464889|PCMT1	REV__ENSG00000120265|ENST00000464889|PCMT1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.1998291015625	2	476.197467	950.380382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.037	1	32.02	31.52	32.52	-0.017464								0	0	0	0.29245	1	1484	1484		30.504	11.144	1		+		45734	18405	30725	30738	51704	51704					-0.09679304039025283
QPSGYPYSE	9	Unmodified	_QPSGYPYSE_					0	0	0			REV__nc|ENSG00000167566|Q9HCH0-2|NCKAP5L	REV__nc|ENSG00000167566|Q9HCH0-2|NCKAP5L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.2201538085938	2	514.221997	1026.42944	0.35237	0.00018119	-4.1505	-0.0021343	-3.7981	-0.0019531	514.2197422056641	29.563	0.92425	29.594	29.101	30.025	0.030945					66	27	3	0	0	0	0.69624	1	1479	1479		40.778	0	1	300180	+		45735	21396	30726	30739	51705	51705					-0.08271692478410841
QPSIIPLE	8	Unmodified	_QPSIIPLE_					0	0	0		nc|ENSG00000160753|Q9BVN2-4|RUSC1;ENSG00000160753|ENST00000368352|RUSC1	nc|ENSG00000160753|Q9BVN2-4|RUSC1	nc|ENSG00000160753|Q9BVN2-4|RUSC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.30645751953125	2	448.758018	895.501483	-8.7702E-05	-3.9357E-08	-4.0823	-0.001832	-4.0824	-0.001832	448.7560902370376	22.623	1.1023	22.204	21.879	22.981	-0.41879					31	25	2	0	0	0	0.4196	1	1021	1021		37.159	6.6555	1	38781			45736	5603	30727	30740	51706	51706					0.04955266665956515
QPSKTSHSDK	10	Unmodified	_QPSKTSHSDK_					0	0	0		chr2:63050897-63051249|23|25.48|0.9|4.83|+|0|OTX1,OTX1|1	chr2:63050897-63051249|23|25.48|0.9|4.83|+|0|OTX1,OTX1|1	chr2:63050897-63051249|23|25.48|0.9|4.83|+|0|OTX1,OTX1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.7793579101562	2	557.778002	1113.54145	0.21835	0.00012179	-0.10306	-5.7487E-05	0.11528	6.4301E-05	557.7776122217316	25.489	0.5225	25.552	25.231	25.754	0.063122					36	25	2	0	0	0	0.86218	1	940	940		32.812	0	1	51451			45737	342	30728	30741	51707	51707					-0.01077838401442932
QPSPEPPLGLL	11	Unmodified	_QPSPEPPLGLL_					0	0	0		nc|ENSG00000164403|Q2M3G4-2|SHROOM1;ENSG00000164403|ENST00000378679|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3193969726562	2	574.321514	1146.62847	0.59155	0.00033974	-4.0871	-0.0023473	-3.4955	-0.0020075	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.61369	1	9606	9606		42.864	6.4175	1	1777600			45738	5963	30729	30742	51708	51708					0.061025678202895506
QPSPSMVGH	9	Unmodified	_QPSPSMVGH_					0	0	0		nc|ENSG00000204842|Q99700-5|ATXN2;ENSG00000204842|ENST00000673436|ATXN2;nc|ENSG00000204842|Q99700-4|ATXN2;nc|ENSG00000204842|Q99700|ATXN2;nc|ENSG00000204842|Q99700-2|ATXN2;ENST00000552323.1_1_12:111923039-111924609:-|nuORF	nc|ENSG00000204842|Q99700-5|ATXN2	nc|ENSG00000204842|Q99700-5|ATXN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.22442626953125	2	470.221277	938.428001	0.075405	3.5457E-05	2.9156	0.001371	2.991	0.0014064	470.22238126673386	23.189	0.87008	23.282	23.041	23.911	0.092134					56	40	2	0	0	0	0.76255	1	738	738		35.618	0	1	62364			45739	8489	30730	30743	51709	51709					-0.04367605048162204
QPSPSMVGH	9	Unmodified	_QPSPSMVGH_					0	0	0		nc|ENSG00000204842|Q99700-5|ATXN2;ENSG00000204842|ENST00000673436|ATXN2;nc|ENSG00000204842|Q99700-4|ATXN2;nc|ENSG00000204842|Q99700|ATXN2;nc|ENSG00000204842|Q99700-2|ATXN2;ENST00000552323.1_1_12:111923039-111924609:-|nuORF	nc|ENSG00000204842|Q99700-5|ATXN2	nc|ENSG00000204842|Q99700-5|ATXN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	470.221277	938.428001	0.58427	0.00027474	2.2374	0.0010521	2.8216	0.0013268	470.22212316099376	23.339	0.79859	23.341	23.121	23.92	0.0018959	0.02963	-0.00028547	NaN	35.618	55	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68752			45740	8489	30730	30743							-0.04367605048162204
QPSPTSCWPS	10	Unmodified	_QPSPTSCWPS_					0	0	0		ENST00000368489.3_1_1:154315281-154315774:+|nuORF	ENST00000368489.3_1_1:154315281-154315774:+|nuORF	ENST00000368489.3_1_1:154315281-154315774:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.2825927734375	2	545.237124	1088.45969	0.069497	3.7892E-05	-1.9785	-0.0010788	-1.909	-0.0010409	545.2363054373487	50.627	0.4941	50.603	50.384	50.878	-0.02343					20	15	2	0	0	0	0.37624	1	4426	4426		14.865	0	1	91048			45741	10596	30731	30744	51710	51710					-0.08099657084881073
QPSQNLEYPLN	11	Unmodified	_QPSQNLEYPLN_					0	0	0		ENSG00000175518|ENST00000380184|UBQLNL	ENSG00000175518|ENST00000380184|UBQLNL	ENSG00000175518|ENST00000380184|UBQLNL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.75518798828125	3	434.882337	1301.62518	0.26153	0.00011373	3.9858	0.0017334	4.2473	0.0018471	435.21963668103	66.336	0.62698	66.886	66.484	67.111	0.55071					23	16	2	0	0	0	0.17784	1	7205	7205		8.4073	0	1	85690			45742	7024	30732	30745	51711	51711					-0.013567270243584062
QPSTPGPDLL	10	Unmodified	_QPSTPGPDLL_					0	0	0		ENST00000537232.5_2_15:56657648-56657869:+|nuORF;ENSG00000151575|ENST00000696102|TEX9	ENST00000537232.5_2_15:56657648-56657869:+|nuORF	ENST00000537232.5_2_15:56657648-56657869:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.7686767578125	2	512.769114	1023.52368	0.29414	0.00015083	-0.69853	-0.00035818	-0.40439	-0.00020736	512.7686314865582	48.401	1.6422	49.305	48.411	50.053	0.90424					104	40	4	0	0	0	0.3985	1	4721	4721		64.207	12.872	1	5283800			45743	5127	30733	30746	51712	51712					0.01285446343717922
QPSTPILSM	9	Unmodified	_QPSTPILSM_					0	0	0			REV__ENSG00000179134|ENST00000610417|SAMD4B	REV__ENSG00000179134|ENST00000610417|SAMD4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.2533874511719	2	487.254785	972.495018	-0.86944	-0.00042364	-1.106	-0.00053888	-1.9754	-0.00096252	487.2540607958479	28.748	0.80415	28.719	28.366	29.171	-0.029207					53	18	4	0	0	0	0.55097	1	1747	1747		49.442	0	1	1269000	+		45744	22317	30734	30747	51713	51713					0.0076700544294681094
QPSVIILLSL	10	Unmodified	_QPSVIILLSL_					0	0	0		nc|ENSG00000094841|Q96BW1-3|UPRT;ENST00000462237.5_1_X:74514443-74523343:+|nuORF;ENSG00000094841|ENST00000373383|UPRT	nc|ENSG00000094841|Q96BW1-3|UPRT	nc|ENSG00000094841|Q96BW1-3|UPRT	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	541.8495483398438	2	541.844625	1081.6747	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.883	1	23.938	23.438	24.438	0.054892								0	0	0	0.45132	1	790	790		20.947	0	1				45745	1713	30735	30748	51714	51714					0.13712632722399576
QPSYNLEEITY	11	Unmodified	_QPSYNLEEITY_					0	0	0			REV__ENSG00000138356|ENST00000374700|AOX1	REV__ENSG00000138356|ENST00000374700|AOX1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.88104248046875	3	452.882114	1355.62451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.635	1	18.635	18.135	19.135	0								0	0	0	0.56276	1	325	325		26.75	5.7175	1		+		45746	19461	30736	30749	51715	51715					-0.039075664640904506
QPTEIPIPITL	11	Unmodified	_QPTEIPIPITL_					0	0	0		ENSG00000129636|ENST00000320640|ITFG1	ENSG00000129636|ENST00000320640|ITFG1	ENSG00000129636|ENST00000320640|ITFG1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3518676757812	2	611.358096	1220.70164	-0.25906	-0.00015838	-3.0986	-0.0018944	-3.3577	-0.0020528	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.67778	1	9201	9201		35.152	4.8343	1	3360200			45747	3597	30737	30750	51716	51716					0.1001169654291516
QPTESTEFSL	10	Unmodified	_QPTESTEFSL_					0	0	0			REV__ENST00000587682.5_1_19:44471099-44471177:+|nuORF	REV__ENST00000587682.5_1_19:44471099-44471177:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.7667236328125	2	569.766768	1137.51898	0.51177	0.00029159	-1.0326	-0.00058832	-0.5208	-0.00029674	569.7660224758696	60.966	0.45724	61.085	60.834	61.291	0.11901					44	20	3	0	0	0	0.8545	1	5289	5289		36.447	8.3653	1	681140	+		45748	29131	30738	30751	51717	51717					-0.04427482589699139
QPTFLLLPK	9	Unmodified	_QPTFLLLPK_					0	0	0		ENST00000535977.5_1_16:677627-678308:+|nuORF	ENST00000535977.5_1_16:677627-678308:+|nuORF	ENST00000535977.5_1_16:677627-678308:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.8262329101562	2	528.826235	1055.63792	-0.053193	-2.813E-05	-0.50276	-0.00026587	-0.55595	-0.000294	528.8257687817992	63.392	0.7337	63.78	63.445	64.179	0.38779					38	16	3	0	0	0	0.71772	1	6821	6821		39.253	2.8061	1	372540			45749	13434	30739	30752	51718	51718					0.11232380896467475
QPTGRQPGG	9	Unmodified	_QPTGRQPGG_					0	0	0		ENST00000493335.5_1_22:31492537-31494796:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF	ENST00000493335.5_1_22:31492537-31494796:+|nuORF	ENST00000493335.5_1_22:31492537-31494796:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2324523925781	2	449.230491	896.446428	-1.2863	-0.00057784	1.5021	0.0006748	0.21583	9.6958E-05	449.2311264032564	83.242	4.4752	83.407	81.466	85.941	0.1651					199	104	3	0	0	0	0.76764	1	8120	8120		34.173	0	1	231800			45750	12649	30740	30753	51719	51719					-0.005937270819458718
QPTGTPGTYLL	11	Unmodified	_QPTGTPGTYLL_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1;ENST00000447863.5_1_7:86811523-86824453:+|nuORF;ENST00000580803.1_1_7:86817463-86822708:+|nuORF;ENST00000425406.5_1_7:86817376-86824453:+|nuORF;ENST00000547146.6_1_7:86813892-86824453:+|nuORF	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.3040771484375	2	574.303321	1146.59209	0.16303	9.3629E-05	-3.5287	-0.0020266	-3.3657	-0.0019329	574.3010381217844	17.745	0.20949	17.124	17.023	17.232	-0.62141					8	5	2	0	0	0	0.6493	1	307	307		38.754	0.94209	1	76748			45751	3990	30741	30754	51720	51720					0.024656909235773128
QPTHLLLNART	11	Unmodified	_QPTHLLLNART_					0	0	0			REV__ENST00000581398.1_1_4:1245665-1246076:+|nuORF	REV__ENST00000581398.1_1_4:1245665-1246076:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	632.36279296875	2	632.362036	1262.70952	1.871	0.0011831	-3.2397	-0.0020487	-1.3688	-0.00086555	632.3597010861852	102.69	0.76917	102.92	102.65	103.42	0.22556					66	24	3	0	0	0	0.65746	1	12496	12496		37.812	0.30334	1	27101000	+		45752	29049	30742	30755	51721	51721					0.08867268583003352
QPTKIELLI	9	Unmodified	_QPTKIELLI_					0	0	0			REV__chr20:34105545-34129714|19|20.89|0.05|8.65|-|2|TE_info:HERVK-int,HERVK-int_dup234,ERVK,LTR,donor,+,34129714,34130246|EIF2S2,None|8	REV__chr20:34105545-34129714|19|20.89|0.05|8.65|-|2|TE_info:HERVK-int,HERVK-int_dup234,ERVK,LTR,donor,+,34129714,34130246|EIF2S2,None|8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.3281860351562	2	527.828975	1053.6434	0.34105	0.00018002	-3.8222	-0.0020175	-3.4811	-0.0018375	528.3276442009288	46.318	1.4508	46.357	46.016	47.467	0.038185					58	39	2	0	0	0	0.74721	1	3419	3419		37.159	0.71236	1	444870	+		45753	15772	30743	30756	51722	51722					0.11872059688289482
QPTLPIGAF	9	Unmodified	_QPTLPIGAF_					0	0	0			REV__ENSG00000122863|ENST00000373115|CHST3	REV__ENSG00000122863|ENST00000373115|CHST3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2631530761719	2	472.26601	942.517468	-0.70518	-0.00033303	-2.6148	-0.0012349	-3.32	-0.0015679	472.26450355657465	20.618	0.52882	19.988	19.809	20.338	-0.6296					22	11	3	0	0	0	0.69914	1	681	681		40.573	1.7665	1	94647	+		45754	18518	30744	30757	51723	51723					0.043909729028428046
QPTLPIGAF	9	Unmodified	_QPTLPIGAF_					0	0	0			REV__ENSG00000122863|ENST00000373115|CHST3	REV__ENSG00000122863|ENST00000373115|CHST3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	472.26601	942.517468	-0.70518	-0.00033303	-2.6148	-0.0012349	-3.32	-0.0015679	472.26450355657465	20.618	0.52882	19.988	19.809	20.338	-0.6296	-0.034297	0.00075997	NaN	40.573	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94647	+		45755	18518	30744	30757							0.043909729028428046
QPTPPCPWH	9	Unmodified	_QPTPPCPWH_					0	0	0		ENST00000380909.8_2_22:50637297-50637582:+|nuORF	ENST00000380909.8_2_22:50637297-50637582:+|nuORF	ENST00000380909.8_2_22:50637297-50637582:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.7424926757812	2	531.744919	1061.47529	-0.13634	-7.2499E-05	-4.2104	-0.0022389	-4.3467	-0.0023114	531.7425668988534	41.844	0.56822	41.848	41.539	42.107	0.0043983					29	13	3	0	0	0	0.69914	1	2771	2771		40.573	10.255	1	317360			45756	10939	30745	30758	51724	51724					-0.05299325777195918
QPTPPPPQ	8	Unmodified	_QPTPPPPQ_					0	0	0			REV__ENST00000396008.2_1_22:46447675-46449969:-|nuORF	REV__ENST00000396008.2_1_22:46447675-46449969:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2270202636719	2	431.226885	860.439217	0.2459	0.00010604	0.35379	0.00015256	0.59969	0.0002586	431.22697269182805	25.663	1.9834	25.406	24.638	26.622	-0.25721					115	44	5	0	0	0	0.60357	2	1349	1314;1349		71.296	0	1	5038700	+		45757	26131	30746	30759	51725;51726	51726					0.0034154031761772785
QPTPPPPQ	8	Unmodified	_QPTPPPPQ_					0	0	0			REV__ENST00000396008.2_1_22:46447675-46449969:-|nuORF	REV__ENST00000396008.2_1_22:46447675-46449969:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.227294921875	2	431.226885	860.439217	2.9201	0.0012592	-2.3558	-0.0010159	0.56433	0.00024335	431.2258144078327	25.682	2.586	25.25	24.227	26.813	-0.4311					128	58	4	0	0	0	0.38235	2	1339	1339;1388		94.006	0	1	5689000	+		45758	26131	30746	30759	51727;51728	51727					0.0034154031761772785
QPTPQVPQ	8	Unmodified	_QPTPQVPQ_					0	0	0		ENST00000553865.1_1_14:99968556-99969378:+|nuORF;nc|ENSG00000090061|O75909-2|CCNK;nc|ENSG00000090061|O75909-1|CCNK;ENSG00000090061|ENST00000389879|CCNK;nc|ENSG00000090061|O75909-4|CCNK	ENST00000553865.1_1_14:99968556-99969378:+|nuORF	ENST00000553865.1_1_14:99968556-99969378:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7390441894531	2	447.737617	893.460681	-1.2161	-0.0005445	2.8581	0.0012797	1.642	0.00073519	447.7387518269618	27.765	1.0003	27.668	27.183	28.184	-0.096947					35	22	3	0	0	0	0.79403	1	1640	1640		63.306	4.5243	1	235940			45759	1639	30747	30760	51729	51729					0.009689253463307068
QPTTVTTC	8	Unmodified	_QPTTVTTC_					0	0	0		ENSG00000204873|ENST00000411528|KRTAP9-3	ENSG00000204873|ENST00000411528|KRTAP9-3	ENSG00000204873|ENST00000411528|KRTAP9-3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7750549316406	2	425.702386	849.390218	-0.14147	-6.0225E-05	3.835	0.0016326	3.6935	0.0015723	425.7042757072602	38.361	0.11917	38.703	38.618	38.737	0.34187					4	2	2	0	0	0	0.4196	1	3152	3152		20.947	0	1	15460			45760	8495	30748	30761	51730	51730					-0.04050116033647555
QPVAETIH	8	Unmodified	_QPVAETIH_					0	0	0			REV__ENSG00000162396|ENST00000371279|PARS2	REV__ENSG00000162396|ENST00000371279|PARS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.73834228515625	2	447.737617	893.460681	1.2694	0.00056835	0.45962	0.00020579	1.729	0.00077414	447.7376770900924	27.789	0.82314	27.534	27.115	27.938	-0.25465					36	18	3	0	0	0	0.91005	1	1645	1645		42.474	3.6683	1	248700	+		45761	20808	30749	30762	51731	51731					0.009689253463307068
QPVAWIQP	8	Unmodified	_QPVAWIQP_					0	0	0			REV__ENST00000371410.4_2_X:119077536-119077716:-|nuORF	REV__ENST00000371410.4_2_X:119077536-119077716:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.7590637207031	2	469.758352	937.502152	0.22864	0.00010741	4.3938	0.002064	4.6224	0.0021714	469.7603126237485	40.263	1.3568	40.345	40.004	41.361	0.081345					62	45	2	0	0	0	0.91005	1	2536	2536		42.474	1.6963	1	459690	+		45762	25686	30750	30763	51732	51732					0.030901061056511026
QPVCASPIPAR	11	Unmodified	_QPVCASPIPAR_					0	0	0		ENST00000378313.6_2_19:41246893-41247043:-|nuORF	ENST00000378313.6_2_19:41246893-41247043:-|nuORF	ENST00000378313.6_2_19:41246893-41247043:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.8087158203125	2	569.805508	1137.59646	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.994	1	18.07	17.57	18.57	0.075441								0	0	0	0.56276	1	239	239		37.508	2.3561	1				45763	10863	30751	30764	51733	51733					0.03316876865483209
QPVNAAVAQSP	11	Unmodified	_QPVNAAVAQSP_					0	0	0		nc|ENSG00000116580|Q3T8J9-3|GON4L;ENSG00000116580|ENST00000368331|GON4L;nc|ENSG00000116580|Q3T8J9-2|GON4L;ENST00000500626.2_1_1:155619824-155629984:-|nuORF;nc|ENSG00000163374|Q9H869-7|YY1AP1;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;nc|ENSG00000163374|Q9H869-5|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-3|YY1AP1;ENSG00000163374|ENST00000355499|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1	nc|ENSG00000116580|Q3T8J9-3|GON4L;nc|ENSG00000163374|Q9H869-6|YY1AP1	nc|ENSG00000116580|Q3T8J9-3|GON4L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	541.2861328125	2	541.285463	1080.55637	0.12175	6.5901E-05	-0.16321	-8.8345E-05	-0.041464	-2.2444E-05	541.2853268986822	20.124	0.77876	20.2	19.898	20.676	0.075848					97	39	4	0	0	0	0.48313	1	475	475		53.089	1.8963	1	586580			45764	2927;5789	30752	30765	51734	51734					0.019316534665676954
QPVPIGRQ	8	Unmodified	_QPVPIGRQ_					0	0	0			REV__ENST00000572393.1_1_16:4311837-4313697:-|nuORF	REV__ENST00000572393.1_1_16:4311837-4313697:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.76141357421875	2	447.761426	893.5083	1.3347	0.00059763	-2.5954	-0.0011621	-1.2607	-0.00056451	447.76038296550075	23.705	4.4673	23.13	22.409	26.877	-0.57415					218	103	6	0	0	0	0.79403	1	1216	1216		63.306	5.495	1	38285000	+		45765	28946	30753	30766	51735	51735					0.05728624337200472
QPVRQIRQ	8	Unmodified	_QPVRQIRQ_					0	0	0			REV__ENSG00000158863|ENST00000289921|FHIP2B	REV__ENSG00000158863|ENST00000289921|FHIP2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.98876953125	2	512.804157	1023.59376	1.0244	0.00052533	1.875	0.00096152	2.8994	0.0014868	512.804851145109	32.189	0.73135	32.296	31.93	32.662	0.10707					38	16	3	0	0	0	0.4196	1	2207	2207		29.15	0	1	314440	+		45766	20626	30754	30767	51736	51736					0.08290789522845898
QPVSKAIS	8	Unmodified	_QPVSKAIS_					0	0	0		nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-4|SVIL;nc|ENSG00000197321|O95425-3|SVIL;ENSG00000197321|ENST00000355867|SVIL	nc|ENSG00000197321|O95425-2|SVIL	nc|ENSG00000197321|O95425-2|SVIL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.24493408203125	2	415.242535	828.470518	4.5254	0.0018791	0.48844	0.00020282	5.0138	0.0020819	415.2428634068345	107.07	0.82995	107.22	106.81	107.64	0.14929					51	28	3	0	0	0	0.85277	1	13109	13109		25.45	0	1	2111700			45767	8152	30755	30768	51737	51737					0.049421133517171256
QPVSPFPK	8	Unmodified	_QPVSPFPK_					0	0	0		ENST00000449606.5_1_16:23534653-23534791:-|nuORF	ENST00000449606.5_1_16:23534653-23534791:-|nuORF	ENST00000449606.5_1_16:23534653-23534791:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2506103515625	2	450.252903	898.491253	-1.4095	-0.00063463	-2.7375	-0.0012326	-4.147	-0.0018672	450.2515003535652	31.411	1.0426	31.49	30.856	31.899	0.079836					49	23	4	0	0	0	0.72312	1	2140	2140		66.429	3.123	1	1166300			45768	11877	30756	30769	51738	51738					0.03794703731375648
QPVSVETAQ	9	Unmodified	_QPVSVETAQ_					0	0	0			REV__ENSG00000090060|ENST00000216277|PAPOLA	REV__ENSG00000090060|ENST00000216277|PAPOLA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.63092041015625	2	479.745639	957.476725	1.2735	0.00061095	3.5004	0.0016793	4.7739	0.0022902	479.7472340649475	20.086	0.64769	19.617	19.303	19.95	-0.46967					15	13	2	0	0	0	0.20789	1	567	567		35.618	0	1	32209	+		45769	16981	30757	30770	51739	51739					-0.003714132074264853
QQADVEVQER	10	Unmodified	_QQADVEVQER_					0	0	0			REV__nc|ENSG00000254893|A6NIZ1|RAP1BL	REV__nc|ENSG00000254893|A6NIZ1|RAP1BL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	601.2946166992188	2	601.294016	1200.57348	0.6413	0.00038561	-0.10233	-6.1529E-05	0.53897	0.00032408	601.2933118496663	78.348	0.7178	78.759	78.551	79.269	0.4106					32	16	3	0	0	0	0.34592	1	8945	8945		68.626	2.1965	1	435050	+		45770	30241	30758	30771	51740	51740					-0.018784707182931015
QQADVEVQER	10	Unmodified	_QQADVEVQER_					0	0	0			REV__nc|ENSG00000254893|A6NIZ1|RAP1BL	REV__nc|ENSG00000254893|A6NIZ1|RAP1BL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	601.2938842773438	2	601.294016	1200.57348	-0.17354	-0.00010435	0.18691	0.00011239	0.013371	8.0399E-06	601.2935997377257	78.245	0.71089	78.808	78.537	79.248	0.56332					36	16	3	0	0	0	0.3872	1	8977	8977		65.157	8.7235	1	568860	+		45771	30241	30758	30771	51741	51741					-0.018784707182931015
QQADVEVQER	10	Unmodified	_QQADVEVQER_					0	0	0			REV__nc|ENSG00000254893|A6NIZ1|RAP1BL	REV__nc|ENSG00000254893|A6NIZ1|RAP1BL	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	601.294016	1200.57348	-0.17354	-0.00010435	0.18691	0.00011239	0.013371	8.0399E-06	601.2935997377257	78.245	0.71089	78.808	78.537	79.248	0.56332	0.024803	0.00024631	NaN	68.626	36	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	568860	+		45772	30241	30758	30771							-0.018784707182931015
QQAELVDEDAM	11	Unmodified	_QQAELVDEDAM_					0	0	0		ENST00000569018.5_1_16:57789126-57789830:+|nuORF;ENST00000566611.5_1_16:57786940-57790081:+|nuORF;ENSG00000140854|ENST00000379661|KATNB1	ENST00000569018.5_1_16:57789126-57789830:+|nuORF	ENST00000569018.5_1_16:57789126-57789830:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	624.7728881835938	2	624.774267	1247.53398	-0.18061	-0.00011284	0.75376	0.00047093	0.57315	0.00035809	624.7748591110883	53.317	0.39412	53.313	53.119	53.513	-0.0042343					17	10	2	0	0	0	0.72106	1	4656	4656		28.081	0.19925	1	133570			45773	4461	30759	30772	51742	51742					-0.07988358784041338
QQAELVDEDAM	11	Unmodified	_QQAELVDEDAM_					0	0	0		ENST00000569018.5_1_16:57789126-57789830:+|nuORF;ENST00000566611.5_1_16:57786940-57790081:+|nuORF;ENSG00000140854|ENST00000379661|KATNB1	ENST00000569018.5_1_16:57789126-57789830:+|nuORF	ENST00000569018.5_1_16:57789126-57789830:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	624.774267	1247.53398	-0.50179	-0.0003135	1.2427	0.00077643	0.74095	0.00046293	624.7752326452186	53.258	0.41579	53.233	53.017	53.433	-0.024754	-0.086321	0.00042358	NaN	28.081	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89894			45774	4461	30759	30772							-0.07988358784041338
QQAELVDEDAM	11	Unmodified	_QQAELVDEDAM_					0	0	0		ENST00000569018.5_1_16:57789126-57789830:+|nuORF;ENST00000566611.5_1_16:57786940-57790081:+|nuORF;ENSG00000140854|ENST00000379661|KATNB1	ENST00000569018.5_1_16:57789126-57789830:+|nuORF	ENST00000569018.5_1_16:57789126-57789830:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	624.774267	1247.53398	-0.14902	-9.3103E-05	0.79743	0.00049821	0.64841	0.00040511	624.7748895056363	53.295	0.55849	53.313	53.006	53.565	0.01749	-0.0068599	-0.00013285	NaN	28.081	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130000			45775	4461	30759	30772							-0.07988358784041338
QQAELVDEDAM	11	Unmodified	_QQAELVDEDAM_					0	0	0		ENST00000569018.5_1_16:57789126-57789830:+|nuORF;ENST00000566611.5_1_16:57786940-57790081:+|nuORF;ENSG00000140854|ENST00000379661|KATNB1	ENST00000569018.5_1_16:57789126-57789830:+|nuORF	ENST00000569018.5_1_16:57789126-57789830:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	624.774267	1247.53398	0.49628	0.00031007	0.71484	0.00044661	1.2111	0.00075668	624.7747144041749	53.349	0.23744	53.42	53.241	53.478	0.070713	0.10036	-0.00023605	NaN	28.081	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68265			45776	4461	30759	30772							-0.07988358784041338
QQAENNHVLK	10	Unmodified	_QQAENNHVLK_					0	0	0			REV__ENSG00000204815|ENST00000377540|ODAD4	REV__ENSG00000204815|ENST00000377540|ODAD4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.808837890625	2	590.807094	1179.59963	-0.8677	-0.00051265	3.8257	0.0022603	2.958	0.0017476	590.8092605790742	59.99	1.6283	59.99	59.57	61.199	0					167	67	3	0	0	0	0.28217	1	5261	5261		74.255	2.9593	1	3570000	+		45777	23520	30760	30773	51743	51743					0.017018432438362652
QQAENNHVLK	10	Unmodified	_QQAENNHVLK_					0	0	0			REV__ENSG00000204815|ENST00000377540|ODAD4	REV__ENSG00000204815|ENST00000377540|ODAD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.80908203125	2	590.807094	1179.59963	0.42073	0.00024857	2.8669	0.0016938	3.2876	0.0019423	590.8087931973557	57.669	1.7305	58.224	57.808	59.538	0.55513					104	42	3	0	0	0	0.33399	1	6024	6024		69.628	0.8408	1	12960000	+		45778	23520	30760	30773	51744	51744					0.017018432438362652
QQAPALWQ	8	Unmodified	_QQAPALWQ_					0	0	0		ENST00000494375.2_1_19:42042089-42043170:+|nuORF	ENST00000494375.2_1_19:42042089-42043170:+|nuORF	ENST00000494375.2_1_19:42042089-42043170:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	471.2425842285156	2	471.245609	940.476666	-0.95009	-0.00044772	-2.9229	-0.0013774	-3.873	-0.0018251	471.24408596775964	85.692	3.2441	85.877	84.627	87.871	0.18523					176	75	3	0	0	0	0.85277	1	8468	8468		25.45	2.4077	1	288030			45779	12747	30761	30774	51745	51745					0.004046315832169967
QQDDREGYPG	10	Unmodified	_QQDDREGYPG_					0	0	0			REV__ENSG00000160410|ENST00000291842|SHKBP1	REV__ENSG00000160410|ENST00000291842|SHKBP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.7479858398438	2	582.749441	1163.48433	-1.4231	-0.00082933	1.3946	0.00081272	-0.028498	-1.6607E-05	582.7501639764592	24.847	0.39258	24.847	24.673	25.066	0					28	17	2	0	0	0	0.86348	1	863	863		31.53	2.3803	1	64641	+		45780	20718	30762	30775	51746	51746					-0.09087305677826407
QQDTTMSGYC	10	Unmodified	_QQDTTMSGYC_					0	0	0			REV__nc|ENSG00000108406|Q8IX18-4|DHX40	REV__nc|ENSG00000108406|Q8IX18-4|DHX40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.2158813476562	2	567.215531	1132.41651	0.93315	0.0005293	2.6921	0.001527	3.6252	0.0020563	567.7181957165292	19.074	0.34042	18.445	18.28	18.62	-0.6296					11	7	2	0	0	0	0.77314	1	475	475		40.778	4.3314	1	60843	+		45781	17709	30763	30776	51747	51747					-0.14440214924456996
QQDVKKEKD	9	Unmodified	_QQDVKKEKD_					0	0	0		ENST00000528172.1_1_11:4232759-4233284:-|nuORF	ENST00000528172.1_1_11:4232759-4233284:-|nuORF	ENST00000528172.1_1_11:4232759-4233284:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.298583984375	2	559.296027	1116.5775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.173	1	59.726	59.226	60.226	0.55323								0	0	0	0.39224	1	6241	6241		53.351	2.016	1				45782	13297	30764	30777	51748	51748					0.023876187754240163
QQEAGLPAATH	11	Unmodified	_QQEAGLPAATH_					0	0	0		ENST00000604751.1_1_9:115626600-115626654:+|nuORF	ENST00000604751.1_1_9:115626600-115626654:+|nuORF	ENST00000604751.1_1_9:115626600-115626654:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	561.7833862304688	2	561.780544	1121.54654	0.050182	2.8191E-05	3.4621	0.0019449	3.5122	0.0019731	561.7822404459004	46.819	0.55844	46.74	46.477	47.036	-0.079006					26	14	3	0	0	0	0.59499	1	3473	3473		45.022	12.21	1	277480			45783	14432	30765	30778	51749	51749					-0.009375345388207279
QQEGTLLGKFT	11	Unmodified	_QQEGTLLGKFT_					0	0	0		nc|ENSG00000100242|Q9UH99-3|SUN2;ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3328857421875	2	611.327328	1220.6401	0.41561	0.00025408	2.9005	0.0017732	3.3161	0.0020272	611.3290637952541	78.627	1.0378	78.573	78.292	79.329	-0.053558					59	27	3	0	0	0	0.58425	1	7828	7828		45.972	4.5456	1	333110			45784	14812	30766	30779	51750	51750					0.038607648436027375
QQEIMALLI	9	Unmodified	_QQEIMALLI_					0	0	0		ENST00000315684.12_2_17:8131156-8131411:-|nuORF	ENST00000315684.12_2_17:8131156-8131411:-|nuORF	ENST00000315684.12_2_17:8131156-8131411:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.8423461914062	2	529.79936	1057.58417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.876	1	22.964	22.464	23.464	0.088013								0	0	0	0.32159	1	711	711		23.042	0	1				45785	9979	30767	30780	51751	51751					0.05767840402472757
QQENKPSH	8	Unmodified	_QQENKPSH_					0	0	0		ENSG00000074657|ENST00000591808|ZNF532;ENST00000518830.2_1_8:120492577-120492979:-|nuORF;ENST00000590442.1_1_18:56648660-56651695:+|nuORF;ENST00000592249.5_1_18:56620439-56651695:+|nuORF	ENSG00000074657|ENST00000591808|ZNF532	ENSG00000074657|ENST00000591808|ZNF532	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2328796386719	2	484.23323	966.451907	0.53423	0.00025869	-0.66811	-0.00032352	-0.13388	-6.4827E-05	484.2328344963672	23.219	1.5737	22.644	22.068	23.641	-0.57415					75	37	3	0	0	0	0.79403	1	1012	1012		63.306	0.32785	1	1837400			45786	1311	30768	30781	51752	51752					-0.032660482901405885
QQFIVTSGSGH	11	Unmodified	_QQFIVTSGSGH_					0	0	0		nc|ENSG00000169180|Q96QU8-2|XPO6;ENSG00000169180|ENST00000304658|XPO6	nc|ENSG00000169180|Q96QU8-2|XPO6	nc|ENSG00000169180|Q96QU8-2|XPO6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.7905883789062	2	580.78837	1159.56219	-0.54253	-0.00031509	4.3469	0.0025246	3.8044	0.0022095	580.7907032507866	19.861	1.1389	19.232	18.937	20.076	-0.62961					54	24	3	0	0	0	0.6921	1	600	600		32.812	0.85756	1	347400			45787	6476	30769	30782	51753	51753					-0.011212480217409393
QQFLVLLTT	9	Unmodified	_QQFLVLLTT_					0	0	0		ENST00000469302.1_1_13:113140309-113144032:-|nuORF;ENSG00000126216|ENST00000261965|TUBGCP3	ENST00000469302.1_1_13:113140309-113144032:-|nuORF	ENST00000469302.1_1_13:113140309-113144032:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8171997070312	2	531.813325	1061.6121	3.2614	0.0017345	3.9718	0.0021123	7.2332	0.0038467	531.8152553069001	101.24	0.81892	101.19	100.8	101.62	-0.049828					49	19	4	0	0	0	0.78983	1	11021	11021		27.882	1.1893	1	580610			45788	3444	30770	30783	51754	51754					0.08375486654176711
QQGPGPQQQ	9	Unmodified	_QQGPGPQQQ_					0	0	0			REV__ENSG00000160714|ENST00000292211|UBE2Q1	REV__ENSG00000160714|ENST00000292211|UBE2Q1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2329406738281	2	484.23323	966.451907	0.78986	0.00038248	-0.98339	-0.00047619	-0.19352	-9.371E-05	484.23263862664584	23.199	1.8288	22.781	22.016	23.845	-0.41879					84	42	4	0	0	0	0.17307	1	998	998		79.451	10.966	1	1385900	+		45789	20735	30771	30784	51755	51755					-0.032660482901405885
QQHHHLLSILG	11	Unmodified	_QQHHHLLSILG_					0	0	0			REV__ENST00000511209.5_1_5:56509967-56517206:+|nuORF	REV__ENST00000511209.5_1_5:56509967-56517206:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3624877929688	2	641.854378	1281.6942	7.1265	0.0045742	0.9889	0.00063473	8.1154	0.0052089	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.70737	1	13715	13715		30.318	1.1477	1	98705	+		45790	26518	30772	30785	51756	51756					0.0646240178584776
QQHQVPVP	8	Unmodified	_QQHQVPVP_					0	0	0		ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.7478942871094	2	466.751059	931.487565	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.6	1	75.647	75.147	76.147	0.046448								0	0	0	0.29568	1	7360	7360		35.201	1.6851	1				45791	3668	30773	30786	51757	51757					0.01908033957522548
QQIEELGSEGK	11	Unmodified	_QQIEELGSEGK_					0	0	0		ENST00000508482.5_1_17:48797176-48828101:+|nuORF;ENSG00000108848|ENST00000505658|LUC7L3	ENST00000508482.5_1_17:48797176-48828101:+|nuORF	ENST00000508482.5_1_17:48797176-48828101:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.53875732421875	3	406.538458	1216.59355	-0.33641	-0.00013676	1.974	0.00080249	1.6376	0.00066573	406.53915043709776	30.749	0.82197	30.702	30.309	31.131	-0.047064					63	21	4	0	0	0	0.60888	1	1684	1684		43.419	3.5454	1	318470			45792	2437	30774	30787	51758	51758					-0.00608719778347222
QQIKFRTE	8	Unmodified	_QQIKFRTE_					0	0	0			REV__ENSG00000178974|ENST00000313833|FBXO34	REV__ENSG00000178974|ENST00000313833|FBXO34	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8078002929688	2	525.290548	1048.56654	1.1129	0.0005846	-0.98187	-0.00051576	0.13104	6.8835E-05	525.2899523263453	18.171	0.46518	17.694	17.518	17.983	-0.47694					20	9	3	0	0	0	0.4196	1	365	365		30.504	0	1	157350	+		45793	22305	30775	30788	51759	51759					0.04420261191808095
QQILIILRSK	10	Unmodified	_QQILIILRSK_					0	0	0			REV__ENST00000425592.2_1_9:125524228-125524285:+|nuORF	REV__ENST00000425592.2_1_9:125524228-125524285:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.92938232421875	3	404.599324	1210.77614	-0.51813	-0.00020963	-2.1233	-0.00085907	-2.6414	-0.0010687	404.5983786113904	48.063	1.519	47.97	47.678	49.197	-0.093178					53	37	2	0	0	0	0.37624	1	3669	3669		22.562	3.2989	1	214890	+		45794	26536	30776	30789	51760	51760					0.17918504144927283
QQIPSDEWG	9	Unmodified	_QQIPSDEWG_					0	0	0			REV__chr13:113194326-113195071|13|25.62|0.56|5.5|-|1|TE_info:L1MDa,L1MDa_dup5470,L1,LINE,acceptor,-,113193724,113194326|None,PCID2|2	REV__chr13:113194326-113195071|13|25.62|0.56|5.5|-|1|TE_info:L1MDa,L1MDa_dup5470,L1,LINE,acceptor,-,113193724,113194326|None,PCID2|2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.241455078125	2	530.240721	1058.46689	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.82	1	111.86	111.36	112.36	0.041832								0	0	0	0.30416	1	13527	13527		29.15	7.1897	1		+		45795	15560	30777	30790	51761	51761					-0.06000601212804213
QQIRQPGT	8	Unmodified	_QQIRQPGT_					0	0	0			REV__ENST00000572919.1_3_17:3495643-3512676:-|nuORF	REV__ENST00000572919.1_3_17:3495643-3512676:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25341796875	2	464.253966	926.493378	-1.0637	-0.00049381	0.90249	0.00041899	-0.16118	-7.4827E-05	464.25425647374504	80.528	1.4241	80.665	79.54	80.965	0.13702					81	45	3	0	0	0	0.86677	1	7681	7681		27.882	1.1893	1	413450	+		45796	28953	30778	30791	51762	51762					0.027191324691784757
QQIVKLQYT	9	Unmodified	_QQIVKLQYT_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8196411132812	2	560.821681	1119.62881	-1.4169	-0.00079462	-1.874	-0.001051	-3.2909	-0.0018456	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.76764	1	9355	9355		34.173	6.0911	1	758020	+		45797	19132	30779	30792	51763	51763					0.07377987540144204
QQKQARQP	8	Unmodified	_QQKQARQP_					0	0	0			REV__ENST00000458274.1_1_X:149108278-149108993:+|nuORF	REV__ENST00000458274.1_1_X:149108278-149108993:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.79541015625	2	492.27269	982.530826	0.24568	0.00012094	1.0535	0.00051859	1.2992	0.00063954	492.2721871516259	23.006	0.44914	22.587	22.276	22.725	-0.41879					19	10	3	0	0	0	0.4196	1	952	952		26.796	5.8492	1	35560	+		45798	26982	30780	30793	51764	51764					0.038862237347984774
QQKRRKTALLW	11	Unmodified	_QQKRRKTALLW_					0	0	0			REV__ENSG00000134321|ENST00000382040|RSAD2	REV__ENSG00000134321|ENST00000382040|RSAD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.9585876464844	3	476.624643	1426.8521	-1.6911	-0.000806	-0.59192	-0.00028212	-2.283	-0.0010881	476.6241802064395	112.47	0.71533	112.44	112.25	112.96	-0.032333					34	19	2	0	0	0	0.8398	1	12037	12037		6.6596	0.65857	1	354050	+		45799	19133	30781	30794	51765	51765					0.1557490104507906
QQKRRKTALLW	11	Unmodified	_QQKRRKTALLW_					0	0	0			REV__ENSG00000134321|ENST00000382040|RSAD2	REV__ENSG00000134321|ENST00000382040|RSAD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62396240234375	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.73621	1	12422	12422		25.126	7.2928	1	2577100	+		45800	19133	30781	30794	51766	51766					0.1557490104507906
QQKRRKTALLW	11	Unmodified	_QQKRRKTALLW_					0	0	0			REV__ENSG00000134321|ENST00000382040|RSAD2	REV__ENSG00000134321|ENST00000382040|RSAD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	476.624643	1426.8521	0.77964	0.00037159	-2.733	-0.0013026	-1.9534	-0.00093103	476.62348948484555	113.55	0.10728	113.61	113.55	113.65	0.063232	0.17204	-0.003482	NaN	25.126	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20100	+		45801	19133	30781	30794							0.1557490104507906
QQKWIPIMKRE	11	Unmodified	_QQKWIPIMKRE_					0	0	0			REV__ENST00000517609.5_1_8:124429070-124447771:+|nuORF	REV__ENST00000517609.5_1_8:124429070-124447771:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2867126464844	3	486.274623	1455.80204	-0.8367	-0.00040686	0.12751	6.2007E-05	-0.70918	-0.00034486	486.2730630818834	27.177	0.084381	27.246	27.183	27.267	0.068678					5	3	2	0	0	0	0.17955	1	1070	1070		8.7993	0.76496	1	13263	+		45802	20507	30782	30795	51767	51767					0.09237030324902662
QQKWIPIMKRE	11	Unmodified	_QQKWIPIMKRE_					0	0	0			REV__ENST00000517609.5_1_8:124429070-124447771:+|nuORF	REV__ENST00000517609.5_1_8:124429070-124447771:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	486.274623	1455.80204	0.12686	6.1688E-05	-6.573	-0.0031963	-6.4462	-0.0031346	486.2714697983921	27.33	0.096479	27.439	27.352	27.448	0.10901	0.09624	-0.0025694	NaN	8.7993	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29830	+		45803	20507	30782	30795							0.09237030324902662
QQLADLDAHGL	11	Unmodified	_QQLADLDAHGL_					0	0	0			REV__ENSG00000110711|ENST00000279146|AIP	REV__ENSG00000110711|ENST00000279146|AIP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8668823242188	2	590.801477	1179.5884	0.89126	0.00052656	0.057761	3.4125E-05	0.94902	0.00056068	591.301225387015	103.81	0.20543	103.92	103.78	103.98	0.11685					5	4	2	0	0	0	0.14954	1	10979	10979		49.536	0	1	42699	+		45804	17826	30783	30796	51768	51768					0.005790211497242126
QQLAHAPPQT	10	Unmodified	_QQLAHAPPQT_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3161010742188	2	545.78563	1089.55671	0.88758	0.00048443	0.51248	0.00027971	1.4001	0.00076414	545.7878487646128	33.834	0.20625	34.139	34.076	34.282	0.30494					6	4	2	0	0	0	0.37624	1	2489	2489		23.523	0	1	89804	+		45805	21394	30784	30797	51769	51769					0.015510731864196714
QQLFSAFKALL	11	Unmodified	_QQLFSAFKALL_					0	0	0		nc|ENSG00000168502|Q9Y4B5-4|MTCL1;nc|ENSG00000168502|Q9Y4B5-2|MTCL1;nc|ENSG00000168502|Q9Y4B5-3|MTCL1;nc|ENSG00000168502|Q9Y4B5|MTCL1;ENSG00000168502|ENST00000695636|MTCL1;ENST00000520495.5_1_18:8785939-8809580:+|nuORF	nc|ENSG00000168502|Q9Y4B5-4|MTCL1	nc|ENSG00000168502|Q9Y4B5-4|MTCL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3687744140625	2	633.366256	1264.71796	1.5977	0.0010119	2.9361	0.0018596	4.5338	0.0028716	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.6396	1	11851	11851		17.468	0	1	10012000			45806	6407	30785	30798	51770	51770					0.09618822499669477
QQLGKKTLKH	10	Unmodified	_QQLGKKTLKH_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8670654296875	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.86218	2	11530	11530;11609		32.812	4.7309	1	52150000	+		45807	16105	30786	30799	51771;51772	51771					0.12612473933995716
QQLGSGFPDLY	11	Unmodified	_QQLGSGFPDLY_					0	0	0			REV__ENSG00000266074|ENST00000675386|BAHCC1	REV__ENSG00000266074|ENST00000675386|BAHCC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.7992553710938	2	612.798403	1223.58225	-0.26076	-0.0001598	0.12283	7.527E-05	-0.13794	-8.4526E-05	612.7983695527461	60.162	0.93864	60.163	59.86	60.798	0.00051498					65	32	3	0	0	0	0.32928	1	5187	5187		67.494	1.0644	1	772020	+		45808	23962	30787	30800	51773	51773					-0.020594970817910507
QQLILPTKDVV	11	Unmodified	_QQLILPTKDVV_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8772583007812	2	627.37682	1252.73909	6.587	0.0041325	2.6217	0.0016448	9.2086	0.0057773	627.3783410585748	112.58	0.5701	112.61	112.27	112.84	0.032707					46	19	3	0	0	0	0.73893	1	13623	13623		24.519	0	1	89780			45809	5333	30788	30801	51774	51774					0.12282787808499052
QQLLKLLLEQ	10	Unmodified	_QQLLKLLLEQ_					0	0	0			REV__ENSG00000146830|ENST00000678049|GIGYF1	REV__ENSG00000146830|ENST00000678049|GIGYF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.271240234375	3	409.255334	1224.74417	0.54456	0.00022286	-2.4664	-0.0010094	-1.9219	-0.00078654	409.25432649882725	29.193	0.60311	29.019	28.76	29.363	-0.17336					26	13	3	0	0	0	0.37624	1	1846	1846		38.754	0	1	153520	+		45810	15895	30789	30802	51775	51775					0.14079091671123933
QQLLQKAKTG	10	Unmodified	_QQLLQKAKTG_					0	0	0			REV__nc|ENSG00000138193|Q9P212-2|PLCE1	REV__nc|ENSG00000138193|Q9P212-2|PLCE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.8301391601562	2	557.83258	1113.65061	-0.43888	-0.00024482	-2.64	-0.0014727	-3.0789	-0.0017175	557.8312098012074	101.3	1.4308	101.3	100.82	102.25	0					75	34	3	0	0	0	0.8651	1	10303	10303		25.574	0	1	522930	+		45811	19450	30790	30803	51776	51776					0.09832792288693781
QQLPWLFE	8	Unmodified	_QQLPWLFE_					0	0	0		ENSG00000135763|ENST00000258243|URB2	ENSG00000135763|ENST00000258243|URB2	ENSG00000135763|ENST00000258243|URB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7789306640625	2	530.776742	1059.53893	0.54385	0.00028866	3.5733	0.0018966	4.1172	0.0021853	530.7785064746369	56.876	1.1282	57.431	57.181	58.309	0.55513					49	27	3	0	0	0	0.9295	1	5904	5904		55.504	0.60963	1	3022800			45812	4051	30791	30804	51777	51777					0.011543579315684838
QQLQMSADQ	9	Unmodified	_QQLQMSADQ_					0	0	0		CON__P07744	CON__P07744	CON__P07744	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.2423095703125	2	524.740031	1047.46551	0.31828	0.00016701	3.5747	0.0018758	3.893	0.0020428	524.7418682924637	43.758	0.60483	43.732	43.489	44.094	-0.026764					22	14	2	0	0	0	0.76255	1	3370	3370		35.618	0	1	93820		+	45813	590	30792	30805	51778	51778					-0.056325585732110994
QQLQMSADQ	9	Unmodified	_QQLQMSADQ_					0	0	0		CON__P07744	CON__P07744	CON__P07744	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	524.740031	1047.46551	-0.58985	-0.00030952	4.8708	0.0025559	4.281	0.0022464	524.7424394300759	43.762	0.54782	43.728	43.407	43.955	-0.033596	0.0044776	0.00044748	NaN	35.618	22	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136320		+	45814	590	30792	30805							-0.056325585732110994
QQLQMSADQ	9	Unmodified	_QQLQMSADQ_					0	0	0		CON__P07744	CON__P07744	CON__P07744	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	524.740031	1047.46551	-0.24217	-0.00012707	4.3927	0.002305	4.1505	0.0021779	524.742246386628	43.713	0.48399	43.711	43.412	43.896	-0.002449	-0.012507	-5.4321E-05	NaN	35.618	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121490		+	45815	590	30792	30805							-0.056325585732110994
QQLRQKGS	8	Unmodified	_QQLRQKGS_					0	0	0			REV__ENST00000607322.1_1_9:100000884-100000956:-|nuORF	REV__ENST00000607322.1_1_9:100000884-100000956:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7671203613281	2	472.76724	943.519927	-0.93004	-0.00043969	0.85085	0.00040225	-0.079188	-3.7437E-05	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.87479	1	8154	8154		30.504	0	1	526610	+		45816	29387	30793	30806	51779	51779					0.04590821360523023
QQLTGLKS	8	Unmodified	_QQLTGLKS_					0	0	0		nc|ENSG00000256463|Q9BXA9-3|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3;nc|ENSG00000256463|Q9BXA9-2|SALL3;ENSG00000256463|ENST00000537592|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26788330078125	2	437.753267	873.491981	0.48251	0.00021122	2.4401	0.0010682	2.9226	0.0012794	437.7537087545731	23.438	0.10051	23.44	23.409	23.51	0.0018959					5	4	2	0	0	0	0.4196	1	738	738		10.866	0	1	10868			45817	8897	30794	30807	51780	51780					0.05017498380436791
QQLVDRLKRI	10	Unmodified	_QQLVDRLKRI_					0	0	0			REV__nc|ENSG00000126602|Q12931-2|TRAP1	REV__nc|ENSG00000126602|Q12931-2|TRAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.892822265625	2	634.893503	1267.77245	-0.0069402	-4.4063E-06	-1.6425	-0.0010428	-1.6494	-0.0010472	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.64457	1	10945	10945		47.657	0	1	31286000	+		45818	18706	30795	30808	51781	51781					0.14927834371087556
QQLVDRLKRI	10	Unmodified	_QQLVDRLKRI_					0	0	0			REV__nc|ENSG00000126602|Q12931-2|TRAP1	REV__nc|ENSG00000126602|Q12931-2|TRAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.892578125	2	634.893503	1267.77245	-0.13084	-8.307E-05	-1.4622	-0.00092832	-1.593	-0.0010114	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.64457	1	11421	11421		47.657	4.7931	1	40768000	+		45819	18706	30795	30808	51782	51782					0.14927834371087556
QQLVDRLKRI	10	Unmodified	_QQLVDRLKRI_					0	0	0			REV__nc|ENSG00000126602|Q12931-2|TRAP1	REV__nc|ENSG00000126602|Q12931-2|TRAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8932495117188	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.67571	1	11259	11259		45.972	3.108	1	66671000	+		45820	18706	30795	30808	51783	51783					0.14927834371087556
QQLYWSHPR	9	Unmodified	_QQLYWSHPR_					0	0	0		ENST00000557367.2_1_14:50053001-50053064:-|nuORF;ENSG00000213741|ENST00000245458|RPS29;nc|ENSG00000213741|P62273-2|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5407409667969	3	405.540357	1213.59924	2.2598E-05	9.1643E-09	0.41082	0.0001666	0.41084	0.00016661	405.5404180707205	38.155	0.99045	38.127	37.774	38.765	-0.027843					51	22	3	0	0	0	0.76419	1	2570	2570		35.152	3.5178	1	420290			45821	8601	30796	30809	51784	51784					0.0009846831464983552
QQLYWSHPR	9	Unmodified	_QQLYWSHPR_					0	0	0		ENST00000557367.2_1_14:50053001-50053064:-|nuORF;ENSG00000213741|ENST00000245458|RPS29;nc|ENSG00000213741|P62273-2|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5410461425781	3	405.540357	1213.59924	-1.1386	-0.00046176	1.4988	0.00060782	0.36014	0.00014605	405.54088008733055	38.139	1.2338	38.089	37.673	38.906	-0.050369					69	27	4	0	0	0	0.70638	3	2636	2636;2647;2658		40.058	9.2603	1	455370			45822	8601	30796	30809	51785;51786;51787	51785					0.0009846831464983552
QQLYWSHPR	9	Unmodified	_QQLYWSHPR_					0	0	0		ENST00000557367.2_1_14:50053001-50053064:-|nuORF;ENSG00000213741|ENST00000245458|RPS29;nc|ENSG00000213741|P62273-2|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5407409667969	3	405.540357	1213.59924	0.78617	0.00031882	-0.25469	-0.00010329	0.53147	0.00021553	405.54013625430275	38.047	1.211	38.058	37.724	38.935	0.011173					75	27	4	0	0	0	0.68711	3	2569	2569;2580;2592		41.427	16.359	1	449130			45823	8601	30796	30809	51788;51789;51790	51788					0.0009846831464983552
QQLYWSHPR	9	Unmodified	_QQLYWSHPR_					0	0	0		ENST00000557367.2_1_14:50053001-50053064:-|nuORF;ENSG00000213741|ENST00000245458|RPS29;nc|ENSG00000213741|P62273-2|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	ENST00000557367.2_1_14:50053001-50053064:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5527038574219	3	405.540357	1213.59924	0.33012	0.00013388	-4.4732	-0.0018141	-4.1431	-0.0016802	405.53830714948253	28.743	0.50202	28.714	28.408	28.91	-0.029207					14	11	2	0	0	0	0.20789	1	1765	1765		26.063	0	1	70767			45824	8601	30796	30809	51791	51791					0.0009846831464983552
QQNFGPCCRDC	11	Unmodified	_QQNFGPCCRDC_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	635.74169921875	2	635.741725	1269.4689	-0.74252	-0.00047205	0.088738	5.6415E-05	-0.65378	-0.00041563	635.7417565321673	52.368	1.3441	52.368	51.493	52.837	0					66	35	3	0	0	0	0.73893	1	4319	4319		24.519	4.5224	1	270690	+		45825	18894	30797	30810	51792	51792					-0.15505955062508292
QQPEPKSQRDS	11	Unmodified	_QQPEPKSQRDS_					0	0	0		ENSG00000163064|ENST00000295206|EN1	ENSG00000163064|ENST00000295206|EN1	ENSG00000163064|ENST00000295206|EN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.8823547363281	3	433.881107	1298.62149	1.3382	0.00058061	2.7953	0.0012128	4.1335	0.0017935	433.8821183542534	32.334	1.2497	32.328	31.616	32.865	-0.0061455					47	29	3	0	0	0	0.66858	1	1837	1837		36.528	5.959	1	189580			45826	5762	30798	30811	51793	51793					-0.015873967982315662
QQPNEKNDS	9	Unmodified	_QQPNEKNDS_					0	0	0			REV__ENSG00000103343|ENST00000268655|ZNF174	REV__ENSG00000103343|ENST00000268655|ZNF174	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2400512695312	2	530.238709	1058.46287	-0.051973	-2.7558E-05	4.2672	0.0022626	4.2152	0.0022351	530.2409509004085	110.26	1.5296	110.38	110.11	111.63	0.11658					90	54	2	0	0	0	0.58063	1	11973	11973		47.96	3.4285	1	270990	+		45827	17407	30799	30812	51794	51794					-0.06402690706522662
QQPTMQVNL	9	Oxidation (M)	_QQPTM(Oxidation (M))QVNL_		QQPTM(1)QVNL		QQPTM(43)QVNL	0	0	1			REV__nc|ENSG00000186174|Q86UU0-3|BCL9L	REV__nc|ENSG00000186174|Q86UU0-3|BCL9L	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.7706298828125	2	537.766049	1073.51754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.977	1	24.463	23.963	24.963	-0.51365								0	0	0	0.31001	1	1257	1257		42.864	8.6917	1		+		45828	22828	30800	30813	51795	51795		347			-0.01627395159448497
QQQQPGQGP	9	Unmodified	_QQQQPGQGP_					0	0	0		ENSG00000139289|ENST00000266671|PHLDA1	ENSG00000139289|ENST00000266671|PHLDA1	ENSG00000139289|ENST00000266671|PHLDA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.233154296875	2	484.23323	966.451907	0.84969	0.00041145	-0.8013	-0.00038802	0.048386	2.343E-05	484.2327183120764	21.724	1.2506	21.788	21.289	22.539	0.064745					110	44	4	0	0	0	0.31972	1	617	617		63.306	2.3343	1	903290			45829	4358	30801	30814	51796	51796					-0.0326604829012922
QQQQSKSKK	9	Unmodified	_QQQQSKSKK_					0	0	0		ENSG00000111817|ENST00000644252|DSE	ENSG00000111817|ENST00000644252|DSE	ENSG00000111817|ENST00000644252|DSE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3062744140625	2	545.304187	1088.59382	-0.14303	-7.7996E-05	3.4446	0.0018783	3.3015	0.0018003	545.3060632440186	24.601	1.8516	24.273	23.461	25.312	-0.32825					98	41	5	0	0	0	0.30689	1	1168	1168		64.207	0	1	6005700			45830	2614	30802	30815	51797	51797					0.053067447322064254
QQQRDQFCEYL	11	Unmodified	_QQQRDQFCEYL_					0	0	0			REV__ENSG00000188649|ENST00000646931|CC2D2B	REV__ENSG00000188649|ENST00000646931|CC2D2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.28497314453125	3	486.554114	1456.64051	-0.11339	-5.5172E-05	1.9991	0.00097267	1.8857	0.0009175	486.5551598072398	21.324	0.50956	20.696	20.339	20.849	-0.62835					20	13	2	0	0	0	0.17911	1	756	756		5.6988	0	1	58169	+		45831	23020	30803	30816	51798	51798					-0.0695418349882857
QQQRDQFCEYL	11	Unmodified	_QQQRDQFCEYL_					0	0	0			REV__ENSG00000188649|ENST00000646931|CC2D2B	REV__ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	486.554114	1456.64051	0.70741	0.00034419	1.6262	0.00079122	2.3336	0.0011354	486.55486874612467	21.098	0.57676	20.639	20.323	20.9	-0.4591	-0.028434	-0.00028705	NaN	16.53	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57989	+		45832	23020	30803	30816							-0.0695418349882857
QQQRLLDI	8	Unmodified	_QQQRLLDI_					0	0	0		ENST00000479307.5_1_3:186508099-186512490:-|nuORF;nc|ENSG00000163918|P35249-2|RFC4;ENST00000494047.5_1_3:186509405-186522502:-|nuORF;ENSG00000163918|ENST00000296273|RFC4	REV__ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000163918|P35249-2|RFC4	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.280029296875	2	507.290548	1012.56654	-0.41226	-0.00020913	-1.6712	-0.00084778	-2.0835	-0.0010569	507.2908009409779	88.609	0.45152	88.817	88.549	89	0.20731					12	10	2	0	0	0	0.4196	1	8772	8772		45.952	10.334	1	20688			45833	22907;5882	30804	30817	51799	51799					0.06076261191822141
QQQSQHVHL	9	Unmodified	_QQQSQHVHL_					0	0	0			REV__nc|ENSG00000167925|Q8N2G8-3|GHDC	REV__nc|ENSG00000167925|Q8N2G8-3|GHDC	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.784912109375	2	552.780879	1103.5472	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.891	1	74.45	73.95	74.95	0.55891								0	0	0	0.12483	1	8342	8342		74.255	1.3758	1		+		45834	21438	30805	30818	51800	51800					-0.00042695099091361044
QQQVKIKQLLQ	11	Unmodified	_QQQVKIKQLLQ_					0	0	0		ENSG00000104760|ENST00000427924|FGL1	ENSG00000104760|ENST00000427924|FGL1	ENSG00000104760|ENST00000427924|FGL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9448547363281	3	451.945271	1352.81398	-0.47573	-0.000215	-3.838	-0.0017346	-4.3138	-0.0019496	451.9434025086026	55.358	2.0218	55.331	54.102	56.123	-0.027275					115	58	3	0	0	0	0.76579	1	4964	4964		18.531	0.69791	1	431630			45835	2145	30806	30819	51801	51801					0.15168970339755106
QQRGGEERLY	10	Unmodified	_QQRGGEERLY_					0	0	0		ENSG00000166135|ENST00000299163|HIF1AN;ENST00000478787.1_1_10:102296230-102304880:+|nuORF	ENSG00000166135|ENST00000299163|HIF1AN	ENSG00000166135|ENST00000299163|HIF1AN	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3076782226562	2	618.31	1234.60545	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.874	1	26.874	26.374	27.374	0								0	0	0	0.45132	1	1045	1045		39.253	7.298	1				45836	6160	30807	30820	51802	51802					-0.002470582444630054
QQRLFLIRQ	9	Unmodified	_QQRLFLIRQ_					0	0	0			REV__ENST00000345541.6_1_10:28905090-28908532:+|nuORF	REV__ENST00000345541.6_1_10:28905090-28908532:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.2450866699219	3	401.243652	1200.70913	-0.1653	-6.6325E-05	3.4604	0.0013884	3.2951	0.0013221	401.2449412226133	21.064	0.80942	20.436	20.077	20.887	-0.62835					49	20	3	0	0	0	0.58668	1	735	735		47.657	7.5992	1	634220	+		45837	17069	30808	30821	51803	51803					0.11679893653831641
QQRPCLGERPY	11	Carbamidomethyl (C)	_QQRPC(Carbamidomethyl (C))LGERPY_	QQRPC(1)LGERPY		QQRPC(60)LGERPY		0	1	0		nc|ENSG00000140265|Q8IWY8-2|ZSCAN29;ENSG00000140265|ENST00000684362|ZSCAN29;ENST00000566849.5_1_15:43653273-43656590:-|nuORF;nc|ENSG00000140265|Q8IWY8-4|ZSCAN29	nc|ENSG00000140265|Q8IWY8-2|ZSCAN29	nc|ENSG00000140265|Q8IWY8-2|ZSCAN29	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.5654602050781	3	468.566465	1402.67757	-0.74961	-0.00035124	-2.7242	-0.0012765	-3.4738	-0.0016277	468.5653557440957	53.503	1.4608	54.117	53.696	55.157	0.61436					114	34	6	0	0	0	0.38974	2	5406	5406;5442		60.167	10.752	1	11897000			45838	4419	30809	30822	51804;51805	51804	58				-0.007664671624297625
QQRRRKMRRRR	11	Unmodified	_QQRRRKMRRRR_					0	0	0		ENST00000525722.1_1_11:812627-812858:+|nuORF	ENST00000525722.1_1_11:812627-812858:+|nuORF	ENST00000525722.1_1_11:812627-812858:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.83447265625	3	542.997591	1625.97094	-0.035002	-1.9006E-05	-1.758	-0.00095458	-1.793	-0.00097359	542.996602958137	17.477	0.37431	16.867	16.659	17.034	-0.6107					16	8	3	0	0	0	0.18372	1	279	279		6.3209	3.1096	1	236260			45839	13243	30810	30823	51806	51806					0.1829978952162037
QQSAPLFGSSR	11	Unmodified	_QQSAPLFGSSR_					0	0	0			REV__nc|ENSG00000119777|Q6NUQ4-2|TMEM214	REV__nc|ENSG00000119777|Q6NUQ4-2|TMEM214	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3015747070312	2	589.301644	1176.58874	-0.24795	-0.00014612	0.094281	5.556E-05	-0.15367	-9.0557E-05	589.301562411532	110.39	1.2046	110.39	110.16	111.36	0					63	36	3	0	0	0	0.60687	1	11456	11456		43.651	2.8726	1	574490	+		45840	18377	30811	30824	51807	51807					0.0075044086956950196
QQSYPDVTTP	10	Unmodified	_QQSYPDVTTP_					0	0	0			REV__ENSG00000055609|ENST00000262189|KMT2C	REV__ENSG00000055609|ENST00000262189|KMT2C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3298950195312	2	568.266936	1134.51932	0.8731	0.00049615	3.0448	0.0017303	3.9179	0.0022264	568.2686022961792	88.949	0.44977	89.399	89.202	89.652	0.45058					16	10	2	0	0	0	0.37624	1	10515	10515		14.137	0	1	192910	+		45841	16413	30812	30825	51808	51808					-0.042560628698538494
QQTREVEK	8	Unmodified	_QQTREVEK_					0	0	0			REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF	REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.26788330078125	2	509.269813	1016.52507	0.97419	0.00049612	-0.98007	-0.00049912	-0.0058787	-2.9939E-06	509.26916380298894	17.067	0.8777	16.456	16.095	16.972	-0.6107					42	19	4	0	0	0	0.87259	1	204	204		58.782	0	1	585550	+		45842	16363;28014	30813	30826	51809	51809					0.017470804324716482
QQVEPFDY	8	Unmodified	_QQVEPFDY_					0	0	0			REV__ENSG00000171722|ENST00000367935|SPATA46	REV__ENSG00000171722|ENST00000367935|SPATA46	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.3792114257812	2	513.232364	1024.45018	0.1713	8.7915E-05	2.5671	0.0013175	2.7384	0.0014054	513.2335566802994	85.61	0.6637	86.049	85.699	86.363	0.43967					25	15	2	0	0	0	0.4196	1	9983	9983		44.531	15.382	1	204760	+		45843	21761	30814	30827	51810	51810					-0.06107102098746964
QQVFREKK	8	Unmodified	_QQVFREKK_					0	0	0		ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8058471679688	2	531.806365	1061.59818	2.3458	0.0012475	-2.6727	-0.0014214	-0.32698	-0.00017389	531.80487644275	25.24	0.69068	24.809	24.541	25.231	-0.4311					31	15	3	0	0	0	0.47906	2	1305	1292;1305		76.847	10.417	1	422230			45844	4077	30815	30828	51811;51812	51812					0.06984253945756791
QQVQQLQVLLL	11	Unmodified	_QQVQQLQVLLL_					0	0	0		nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B	nc|ENSG00000090889|O95239-2|KIF4A	nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.267578125	3	437.266122	1308.77654	1.1666	0.00051013	2.532	0.0011072	3.6987	0.0016173	437.26715109542596	51.001	1.6388	51.753	50.881	52.52	0.75174					116	39	4	0	0	0	0.78683	1	5097	5097		14.086	0	1	3280800			45845	1658	30816	30829	51813	51813					0.1344987907414179
QQWPLNQQQWM	11	Unmodified	_QQWPLNQQQWM_					0	0	0		nc|ENSG00000132424|Q8TF01-2|PNISR;ENST00000498075.1_1_6:99860192-99862535:-|nuORF;ENST00000466057.1_1_6:99860400-99862535:-|nuORF;ENSG00000132424|ENST00000369239|PNISR	nc|ENSG00000132424|Q8TF01-2|PNISR	nc|ENSG00000132424|Q8TF01-2|PNISR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.23626708984375	3	496.234716	1485.68232	-1.1499	-0.00057064	3.3324	0.0016536	2.1824	0.001083	496.23627294103244	46.682	1.0482	47.605	47.151	48.199	0.92315					60	24	3	0	0	0	0.76892	1	4462	4462		17.833	1.3033	1	3942600			45846	14921	30817	30830	51814	51814					-0.0410958301968094
QQYEDLKQPMA	11	Unmodified	_QQYEDLKQPMA_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.8852233886719	3	450.88346	1349.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.67	1	117.64	117.14	118.14	-0.030861								0	0	0	0.56276	1	14046	14046		29.551	6.1728	1				45847	3510	30818	30831	51815	51815					-0.03227800242052581
QQYLVPKDGQ	10	Unmodified	_QQYLVPKDGQ_					0	0	0		ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	588.3102416992188	2	588.306395	1174.59824	0.65943	0.00038795	3.1766	0.0018688	3.8361	0.0022568	588.3078699211738	78.978	0.85091	78.924	78.592	79.443	-0.053558					57	22	4	0	0	0	0.66675	1	7867	7867		46.457	3.5925	1	444190			45848	1203	30819	30832	51816	51816					0.01792209155087221
QRAFVFLLTL	10	Unmodified	_QRAFVFLLTL_					0	0	0		ENST00000216962.8_1_20:25277165-25277321:+|nuORF	ENST00000216962.8_1_20:25277165-25277321:+|nuORF	ENST00000216962.8_1_20:25277165-25277321:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3663940429688	2	604.363516	1206.71248	3.2045	0.0019367	1.6316	0.00098609	4.8361	0.0029228	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.86225	5	11498	11498;11510;11534;11546;11680		21.96	3.6355	1	63446000			45849	9146	30820	30833	51817;51818;51819;51820;51821	51817					0.11739143707859512
QRAFVFLLTL	10	Unmodified	_QRAFVFLLTL_					0	0	0		ENST00000216962.8_1_20:25277165-25277321:+|nuORF	ENST00000216962.8_1_20:25277165-25277321:+|nuORF	ENST00000216962.8_1_20:25277165-25277321:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3666381835938	2	604.363516	1206.71248	1.0484	0.00063359	3.8594	0.0023325	4.9078	0.0029661	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.86338	1	11266	11266		19.997	0	1	105850000			45850	9146	30820	30833	51822	51822					0.11739143707859512
QRAFVFLLTL	10	Unmodified	_QRAFVFLLTL_					0	0	0		ENST00000216962.8_1_20:25277165-25277321:+|nuORF	ENST00000216962.8_1_20:25277165-25277321:+|nuORF	ENST00000216962.8_1_20:25277165-25277321:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3662109375	2	604.363516	1206.71248	0.90474	0.00054679	3.9121	0.0023643	4.8168	0.0029111	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.86225	1	11074	11074		27.882	5.9224	1	105740000			45851	9146	30820	30833	51823	51823					0.11739143707859512
QRAHALSD	8	Unmodified	_QRAHALSD_					0	0	0		ENST00000461756.1_1_17:37899195-37899563:+|nuORF;nc|ENSG00000141738|Q14451-2|GRB7;nc|ENSG00000141738|Q14451-4|GRB7;ENSG00000141738|ENST00000309156|GRB7;nc|ENSG00000141738|Q14451-3|GRB7	ENST00000461756.1_1_17:37899195-37899563:+|nuORF	ENST00000461756.1_1_17:37899195-37899563:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.232666015625	2	449.230491	896.446428	-0.14348	-6.4457E-05	0.39856	0.00017905	0.25508	0.00011459	449.2306007992336	83.429	3.7259	83.496	82.088	85.814	0.066719					221	85	3	0	0	0	0.85277	1	8365	8365		25.45	1.2474	1	236580			45852	4526	30821	30834	51824	51824					-0.0059372708195724044
QRAIWIRHG	9	Unmodified	_QRAIWIRHG_					0	0	0			REV__ENST00000561976.5_1_16:89777082-89777376:-|nuORF	REV__ENST00000561976.5_1_16:89777082-89777376:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.8251953125	2	568.825424	1135.63629	-0.029858	-1.6984E-05	1.8602	0.0010581	1.8303	0.0010411	568.8263474382011	64.94	0.49887	64.967	64.711	65.21	0.027138					22	14	2	0	0	0	0.78058	1	6131	6131		30.504	1.3336	1	69212	+		45853	28787	30822	30835	51825	51825					0.07390184651080745
QRAIWIRHG	9	Unmodified	_QRAIWIRHG_					0	0	0			REV__ENST00000561976.5_1_16:89777082-89777376:-|nuORF	REV__ENST00000561976.5_1_16:89777082-89777376:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	568.825424	1135.63629	-0.17739	-0.00010091	2.4809	0.0014112	2.3035	0.0013103	568.8267398140448	64.932	0.5481	64.897	64.608	65.156	-0.034798	-0.089422	-0.00022435	NaN	30.504	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74575	+		45854	28787	30822	30835							0.07390184651080745
QRAIWIRHG	9	Unmodified	_QRAIWIRHG_					0	0	0			REV__ENST00000561976.5_1_16:89777082-89777376:-|nuORF	REV__ENST00000561976.5_1_16:89777082-89777376:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	568.825424	1135.63629	-0.029858	-1.6984E-05	1.8602	0.0010581	1.8303	0.0010411	568.8263474382011	64.94	0.49887	64.967	64.711	65.21	0.027138	-0.01929	-0.00093052	NaN	30.504	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69212	+		45855	28787	30822	30835							0.07390184651080745
QRAIWLVP	8	Unmodified	_QRAIWLVP_					0	0	0		ENST00000368043.7_1_1:160709068-160718007:+|nuORF	ENST00000368043.7_1_1:160709068-160718007:+|nuORF	ENST00000368043.7_1_1:160709068-160718007:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7959899902344	2	491.795269	981.575986	-0.41148	-0.00020237	1.3216	0.00064997	0.91013	0.0004476	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.89457	1	4297	4297		37.028	1.8278	1	887820			45856	10578	30823	30836	51826	51826					0.08446074267988024
QRASAEASLKK	11	Unmodified	_QRASAEASLKK_					0	0	0			REV__ENSG00000188886|ENST00000342380|ASTL	REV__ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.8385009765625	2	594.838394	1187.66223	-0.53383	-0.00031754	0.49418	0.00029396	-0.039656	-2.3589E-05	594.838563228105	27.728	0.52662	27.631	27.403	27.929	-0.096945					30	11	3	0	0	0	0.31977	1	1615	1615		70.816	17.88	1	575870	+		45857	23041	30824	30837	51827	51827					0.07590989312029706
QRASAEASLKK	11	Unmodified	_QRASAEASLKK_					0	0	0			REV__ENSG00000188886|ENST00000342380|ASTL	REV__ENSG00000188886|ENST00000342380|ASTL	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	594.838394	1187.66223	-0.53383	-0.00031754	0.49418	0.00029396	-0.039656	-2.3589E-05	594.838563228105	27.728	0.52662	27.631	27.403	27.929	-0.096945	0.047427	0.0010367	NaN	70.816	30	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	575870	+		45858	23041	30824	30837							0.07590989312029706
QRAVAAVAAT	10	Unmodified	_QRAVAAVAAT_					0	0	0		ENSG00000181274|ENST00000371019|FRAT2	ENSG00000181274|ENST00000371019|FRAT2	ENSG00000181274|ENST00000371019|FRAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2778625488281	2	479.277441	956.540328	-0.81003	-0.00038823	1.7076	0.00081842	0.89757	0.00043018	479.2781277040713	97.238	1.2623	97.469	96.955	98.217	0.23103					74	29	3	0	0	0	0.4892	1	10082	10082		56.721	7.2795	1	700460			45859	7381	30825	30838	51828	51828					0.06031992020314192
QRCGNRLLW	9	Unmodified	_QRCGNRLLW_					0	0	0		ENST00000428747.1_1_1:15655214-15655385:-|nuORF	ENST00000428747.1_1_1:15655214-15655385:-|nuORF	ENST00000428747.1_1_1:15655214-15655385:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.301513671875	2	573.303467	1144.59238	-1.0633	-0.00060957	-2.5992	-0.0014901	-3.6624	-0.0020997	573.3019114638097	72.702	0.59371	72.739	72.478	73.072	0.037148					37	21	2	0	0	0	0.31972	1	6915	6915		63.306	6.5852	1	225340			45860	11596	30826	30839	51829	51829					0.02586832162455721
QRCMSIPV	8	Unmodified	_QRCMSIPV_					0	0	0		ENSG00000125686|ENST00000300651|MED1;nc|ENSG00000125686|Q15648-3|MED1	ENSG00000125686|ENST00000300651|MED1	ENSG00000125686|ENST00000300651|MED1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.23272705078125	2	467.235873	932.457192	-1.0397	-0.00048579	-4.3726	-0.002043	-5.4123	-0.0025288	467.23372611150774	69.413	2.1998	69.548	69.082	71.282	0.13522					162	104	3	0	0	0	0.89494	1	6306	6306		37.159	7.3176	1	8546900			45861	3406	30827	30840	51830	51830					-0.011737840235241492
QRDLKQQRLNR	11	Unmodified	_QRDLKQQRLNR_					0	0	0			REV__ENSG00000166402|ENST00000299506|TUB	REV__ENSG00000166402|ENST00000299506|TUB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.26806640625	3	485.614807	1453.82259	-0.72048	-0.00034987	-1.1047	-0.00053647	-1.8252	-0.00088634	485.61424969281495	43.618	0.55678	44.069	43.805	44.362	0.45025					23	13	2	0	0	0	0.17272	1	3934	3934		25.892	6.2648	1	639800	+		45862	21290	30828	30841	51831	51831					0.11383337028951246
QRDRHVPLL	9	Unmodified	_QRDRHVPLL_					0	0	0			REV__ENST00000536349.5_1_9:139999728-140000091:+|nuORF	REV__ENST00000536349.5_1_9:139999728-140000091:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.330322265625	2	567.330539	1132.64652	1.492	0.00084643	-2.5283	-0.0014344	-1.0363	-0.00058793	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.77244	1	9253	9253		32.812	2.3088	1	5346500	+		45863	28404	30829	30842	51832	51832					0.0855074758567298
QRDRHVPLL	9	Unmodified	_QRDRHVPLL_					0	0	0			REV__ENST00000536349.5_1_9:139999728-140000091:+|nuORF	REV__ENST00000536349.5_1_9:139999728-140000091:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3316650390625	2	567.330539	1132.64652	0.27026	0.00015333	-1.2412	-0.00070419	-0.97098	-0.00055087	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.7932	1	11261	11261		24.203	1.1603	1	6007000	+		45864	28404	30829	30842	51833	51833					0.0855074758567298
QREAELQKVRK	11	Unmodified	_QREAELQKVRK_					0	0	0		ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.6060485839844	3	462.272158	1383.79465	0.12301	5.6866E-05	-0.15138	-6.998E-05	-0.028369	-1.3114E-05	462.2720711836785	18.047	0.46498	17.568	17.376	17.841	-0.47905					25	9	4	0	0	0	0.51578	1	336	336		50.791	1.3254	1	302720			45865	2352	30830	30843	51834	51834					0.1181001404881954
QREALSHG	8	Unmodified	_QREALSHG_					0	0	0		ENSG00000243708|ENST00000458483|PLA2G4B;nc|ENSG00000243708|P0C869-8|PLA2G4B;nc|ENSG00000243708|P0C869-7|PLA2G4B;nc|ENSG00000243708|P0C869-6|PLA2G4B;ENST00000491746.5_1_15:42134104-42137535:+|nuORF;nc|ENSG00000243708|P0C869-4|PLA2G4B	ENSG00000243708|ENST00000458483|PLA2G4B	ENSG00000243708|ENST00000458483|PLA2G4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2328186035156	2	449.230491	896.446428	0.61452	0.00027606	-0.40863	-0.00018357	0.20588	9.249E-05	449.2302672922752	83.471	4.8977	83.402	80.905	85.803	-0.069313					227	113	3	0	0	0	0.89494	1	8636	8636		37.159	0.13063	1	260170			45866	8812	30831	30844	51835	51835					-0.005937270819458718
QREGLASH	8	Unmodified	_QREGLASH_					0	0	0		nc|ENSG00000167395|O15015-1|ZNF646;ENSG00000167395|ENST00000300850|ZNF646	nc|ENSG00000167395|O15015-1|ZNF646	nc|ENSG00000167395|O15015-1|ZNF646	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.23309326171875	2	449.230491	896.446428	-1.2863	-0.00057784	1.5021	0.0006748	0.21583	9.6958E-05	449.2311264032564	83.242	4.4752	83.407	81.466	85.941	0.1651					199	104	3	0	0	0	0.89494	1	8060	8060		37.159	1.9584	1	231800			45867	6291	30832	30845	51836	51836					-0.0059372708195724044
QREIPKAKKPT	11	Unmodified	_QREIPKAKKPT_					0	0	0		nc|ENSG00000187742|Q96T21-2|SECISBP2;nc|ENSG00000187742|Q96T21-3|SECISBP2;ENSG00000187742|ENST00000375807|SECISBP2	nc|ENSG00000187742|Q96T21-2|SECISBP2	nc|ENSG00000187742|Q96T21-2|SECISBP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.59771728515625	3	432.597983	1294.77212	-0.96196	-0.00041614	0.089593	3.8758E-05	-0.87237	-0.00037738	432.5979589237285	106.62	0.93322	106.62	106.18	107.11	0					73	20	5	0	0	0	0.76322	2	11078	11031;11078		12.433	0	1	2667500			45868	7877	30833	30846	51837;51838	51838					0.13652414651210165
QREIPKAKKPT	11	Unmodified	_QREIPKAKKPT_					0	0	0		nc|ENSG00000187742|Q96T21-2|SECISBP2;nc|ENSG00000187742|Q96T21-3|SECISBP2;ENSG00000187742|ENST00000375807|SECISBP2	nc|ENSG00000187742|Q96T21-2|SECISBP2	nc|ENSG00000187742|Q96T21-2|SECISBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5975341796875	3	432.597983	1294.77212	-1.8326	-0.00079276	0.99264	0.00042942	-0.83992	-0.00036335	432.5983701682112	106.14	0.94881	106.2	105.74	106.69	0.053749					97	22	5	0	0	0	0.78986	1	11336	11336		8.4073	0	1	20584000			45869	7877	30833	30846	51839	51839					0.13652414651210165
QREKEKIK	8	Unmodified	_QREKEKIK_					0	0	0			REV__nc|ENSG00000104131|O75822-2|EIF3J	REV__nc|ENSG00000104131|O75822-2|EIF3J	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.8192749023438	2	529.819473	1057.62439	1.0823	0.0005734	-1.1349	-0.00060129	-0.052636	-2.7887E-05	529.8187670828245	28.176	0.79678	27.922	27.632	28.428	-0.25465					55	19	4	0	0	0	0.93293	1	1714	1714		51.335	0	1	716660	+		45870	17437	30834	30847	51840	51840					0.09788523117231307
QRFKKFNS	8	Unmodified	_QRFKKFNS_					0	0	0		ENST00000558806.5_1_15:90432326-90437205:-|nuORF	ENST00000558806.5_1_15:90432326-90437205:-|nuORF	ENST00000558806.5_1_15:90432326-90437205:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.7906494140625	2	527.793258	1053.57196	0.23503	0.00012404	-0.13853	-7.3117E-05	0.096492	5.0928E-05	527.7929613361491	32.377	0.66254	32.322	32.057	32.72	-0.05434					24	14	2	0	0	0	0.87479	1	1897	1897		30.504	2.6214	1	40489			45871	13795	30835	30848	51841	51841					0.04731984774275588
QRFLFRLLA	9	Unmodified	_QRFLFRLLA_					0	0	0			REV__ENSG00000140955|ENST00000315906|ADAD2	REV__ENSG00000140955|ENST00000315906|ADAD2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3561401367188	2	582.356025	1162.6975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.98	1	118.01	117.51	118.51	0.026466								0	0	0	0.31828	1	12975	12975		24.203	5.8783	1		+		45872	19651	30836	30849	51842	51842					0.12265696630515777
QRGALELH	8	Unmodified	_QRGALELH_					0	0	0		ENST00000395863.7_1_20:55840810-55841128:-|nuORF	ENST00000395863.7_1_20:55840810-55841128:-|nuORF	ENST00000395863.7_1_20:55840810-55841128:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.25634765625	2	462.256508	922.498464	-0.0054579	-2.523E-06	-1.569	-0.00072529	-1.5745	-0.00072782	462.25568540929567	52.25	1.5618	52.917	52.105	53.667	0.66729					71	37	3	0	0	0	0.92973	1	5204	5204		50.025	0.58299	1	3541100			45873	11102	30837	30850	51843	51843					0.03411436331805362
QRGEPEGGSQ	10	Unmodified	_QRGEPEGGSQ_					0	0	0		nc|ENSG00000137337|Q14676-3|MDC1;ENSG00000137337|ENST00000376406|MDC1	nc|ENSG00000137337|Q14676-3|MDC1	nc|ENSG00000137337|Q14676-3|MDC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.991943359375	2	522.738877	1043.4632	0.25328	0.0001324	-2.8669	-0.0014987	-2.6136	-0.0013663	522.7373184878267	52.404	0.33123	52.827	52.681	53.012	0.42348					10	7	2	0	0	0	0.37624	1	5264	5264		54.722	12.248	1	267140			45874	4191	30838	30851	51844	51844					-0.05679270986661322
QRGKGAKR	8	Unmodified	_QRGKGAKR_					0	0	0			REV__ENST00000577284.1_1_18:9856263-9859319:+|nuORF	REV__ENST00000577284.1_1_18:9856263-9859319:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.77484130859375	2	450.777942	899.541332	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.24	1	113.26	112.76	113.76	0.020027								0	0	0	0.29498	1	13684	13684		26.796	1.3459	1		+		45875	29004	30839	30852	51845	51845					0.08754251179891526
QRGLCKVKLHK	11	Unmodified	_QRGLCKVKLHK_					0	0	0		ENSG00000139865|ENST00000553443|TTC6;nc|ENSG00000139865|Q86TZ1-2|TTC6	ENSG00000139865|ENST00000553443|TTC6	ENSG00000139865|ENST00000553443|TTC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26824951171875	3	437.267691	1308.78124	-0.49223	-0.00021524	0.94558	0.00041347	0.45335	0.00019824	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.72374	1	4024	4024		27.644	1.7522	1	3262400			45876	4401	30840	30853	51846	51846					0.13920484735899663
QRGLKDPN	8	Unmodified	_QRGLKDPN_					0	0	0		nc|ENSG00000103723|Q13367|AP3B2;ENSG00000103723|ENST00000535359|AP3B2	nc|ENSG00000103723|Q13367|AP3B2	nc|ENSG00000103723|Q13367|AP3B2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25384521484375	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.89962	1	8183	8183		38.806	1.7777	1	1603800			45877	2098	30841	30854	51847	51847					0.027191324691784757
QRGSHKALY	9	Unmodified	_QRGSHKALY_					0	0	0			REV__nc|ENSG00000036257|Q13618-3|CUL3	REV__nc|ENSG00000036257|Q13618-3|CUL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7788696289062	2	530.28834	1058.56213	0.52408	0.00027791	-2.676	-0.001419	-2.1519	-0.0011411	530.2873928955362	56.513	0.61264	57.073	56.788	57.401	0.55954					27	13	3	0	0	0	0.20789	1	5892	5892		49.442	3.4896	1	348210	+		45878	16291	30842	30855	51848	51848					0.0351879676891258
QRHADRLY	8	Unmodified	_QRHADRLY_					0	0	0			REV__nc|ENSG00000151553|Q5W0V3-2|FHIP2A	REV__nc|ENSG00000151553|Q5W0V3-2|FHIP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.778564453125	2	529.778139	1057.54173	-0.33938	-0.0001798	2.8956	0.001534	2.5562	0.0013542	529.7795579963132	64.39	0.96629	64.417	63.833	64.799	0.027145					56	25	3	0	0	0	0.90983	1	6087	6087		42.396	3.59	1	324740	+		45879	20257	30843	30856	51849	51849					0.015256261091053602
QRHLHSNVML	10	Unmodified	_QRHLHSNVML_					0	0	0		ENSG00000186230|ENST00000334181|ZNF749	ENSG00000186230|ENST00000334181|ZNF749	ENSG00000186230|ENST00000334181|ZNF749	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	617.8250122070312	2	617.827306	1233.64006	0.71233	0.0004401	-1.1468	-0.00070851	-0.43445	-0.00026841	617.8267216674416	77.994	0.60945	78.13	77.878	78.487	0.13667					45	20	3	0	0	0	0.86348	1	7342	7342		31.53	1.2121	1	220630			45880	7786	30844	30857	51850	51850					0.03258486362642543
QRHRRNLAEWF	11	Unmodified	_QRHRRNLAEWF_					0	0	0		ENSG00000160703|ENST00000409109|NLRX1;ENST00000481860.6_1_11:119043673-119051967:+|nuORF;nc|ENSG00000160703|Q86UT6-2|NLRX1	ENSG00000160703|ENST00000409109|NLRX1;nc|ENSG00000160703|Q86UT6-2|NLRX1	nc|ENSG00000160703|Q86UT6-2|NLRX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	504.9406433105469	3	504.935881	1511.78581	0.40948	0.00020676	3.6604	0.0018482	4.0698	0.002055	504.9376797960629	56.544	0.77992	56.643	56.487	57.266	0.099186					51	34	2	0	0	0	0.71803	2	4776	4768;4776		28.577	6.7963	1	733080			45881	5599;15040	30845	30858	51851;51852	51852					0.05039085203043214
QRIHSRVRLYK	11	Unmodified	_QRIHSRVRLYK_					0	0	0		ENSG00000142528|ENST00000270617|ZNF473	ENSG00000142528|ENST00000270617|ZNF473	ENSG00000142528|ENST00000270617|ZNF473	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.95977783203125	3	485.960026	1454.85825	0.4698	0.0002283	-0.53878	-0.00026183	-0.068981	-3.3522E-05	485.9597301519579	15.648	0.16607	15.159	15.06	15.226	-0.48917					17	7	3	0	0	0	0.78391	1	34	34		14.694	0.60766	1	49840			45882	4566	30846	30859	51853	51853					0.14901419276611705
QRIIKKFQF	9	Unmodified	_QRIIKKFQF_					0	0	0		ENSG00000278870|ENST00000623849|OR51G1	ENSG00000278870|ENST00000623849|OR51G1	ENSG00000278870|ENST00000623849|OR51G1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3668823242188	2	604.369133	1206.72371	-1.2751	-0.00077064	-2.5014	-0.0015118	-3.7765	-0.0022824	604.3675622774762	107.87	0.68172	107.91	107.29	107.97	0.036125					51	16	4	0	0	0	0.62081	1	11477	11477		45.952	3.0877	1	15923000			45883	9037	30847	30860	51854	51854					0.12861965801971564
QRIIKKFQFIK	11	Unmodified	_QRIIKKFQFIK_					0	0	0		ENSG00000278870|ENST00000623849|OR51G1	ENSG00000278870|ENST00000623849|OR51G1	ENSG00000278870|ENST00000623849|OR51G1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.757080078125	3	483.641523	1447.90274	0.71735	0.00034694	3.2376	0.0015658	3.955	0.0019128	483.6433691241162	17.852	1.0348	17.828	17.451	18.486	-0.024035					107	51	3	0	0	0	0.18159	1	332	332		17.167	7.0628	1	291550			45884	9037	30848	30861	51855	51855					0.1967043037006988
QRIIKKFQFIK	11	Unmodified	_QRIIKKFQFIK_					0	0	0		ENSG00000278870|ENST00000623849|OR51G1	ENSG00000278870|ENST00000623849|OR51G1	ENSG00000278870|ENST00000623849|OR51G1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	483.641523	1447.90274	-0.88771	-0.00042933	5.2185	0.0025239	4.3308	0.0020945	483.64423909041784	17.969	0.5652	18.013	17.692	18.257	0.044048	0.099889	0.0014168	NaN	17.167	47	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200210			45885	9037	30848	30861							0.1967043037006988
QRIIKKFQFIK	11	Unmodified	_QRIIKKFQFIK_					0	0	0		ENSG00000278870|ENST00000623849|OR51G1	ENSG00000278870|ENST00000623849|OR51G1	ENSG00000278870|ENST00000623849|OR51G1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	483.641523	1447.90274	0.065341	3.1602E-05	4.3313	0.0020948	4.3966	0.0021264	483.64366785206977	17.836	0.79561	17.899	17.509	18.304	0.062603	-0.014375	0.00012955	NaN	17.167	68	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	270500			45886	9037	30848	30861							0.1967043037006988
QRIIPKMP	8	Unmodified	_QRIIPKMP_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.794921875	2	491.796955	981.579357	-0.70573	-0.00034708	-1.8748	-0.00092201	-2.5805	-0.0012691	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.82464	1	4234	4234		21.702	1.2205	1	772710	+		45887	16105	30849	30862	51856	51856					0.08783001050346684
QRIIPKMP	8	Unmodified	_QRIIPKMP_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79473876953125	2	491.796955	981.579357	0.36727	0.00018062	-2.9598	-0.0014556	-2.5925	-0.001275	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.88915	1	4454	4454		35.201	8.4046	1	748320	+		45888	16105	30849	30862	51857	51857					0.08783001050346684
QRIKNPGG	8	Unmodified	_QRIKNPGG_					0	0	0			REV__ENST00000590901.5_1_18:47808965-47812340:-|nuORF	REV__ENST00000590901.5_1_18:47808965-47812340:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2523193359375	2	435.251226	868.487899	-0.16621	-7.2343E-05	0.40306	0.00017543	0.23685	0.00010309	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.92176	1	7493	7493		46.766	7.9603	1	768200	+		45889	20405	30850	30863	51858	51858					0.04839453677379879
QRIKNPGG	8	Unmodified	_QRIKNPGG_					0	0	0			REV__ENST00000590901.5_1_18:47808965-47812340:-|nuORF	REV__ENST00000590901.5_1_18:47808965-47812340:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2513732910156	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.9159	1	7338	7338		44.531	0.41427	1	712390	+		45890	20405	30850	30863	51859	51859					0.04839453677379879
QRILRLAG	8	Unmodified	_QRILRLAG_					0	0	0			REV__L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|81|2|sense	REV__L1PA16_dup944|chr2:8951505-8955619:-|1.152468003516124|0.0872701952259848|3.72|63.0|81|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8002624511719	2	463.798343	925.582134	0.28206	0.00013082	4.2188	0.0019567	4.5009	0.0020875	463.8001612881591	41.523	1.5134	41.492	41.236	42.75	-0.030991					87	37	3	0	0	0	0.85277	1	3055	3055		25.45	2.4077	1	527400	+		45891	29558	30851	30864	51860	51860					0.11636592499519338
QRINTHIH	8	Unmodified	_QRINTHIH_					0	0	0			REV__ENST00000370651.5_1_6:64290538-64290784:+|nuORF	REV__ENST00000370651.5_1_6:64290538-64290784:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.7847595214844	2	509.780682	1017.54681	5.0414	0.00257	3.9643	0.0020209	9.0057	0.0045909	509.78224354563946	106.8	0.60811	106.95	106.64	107.25	0.14929					48	21	3	0	0	0	0.89494	1	13061	13061		37.159	3.6435	1	378320	+		45892	25661	30852	30865	51861	51861					0.038739299717235554
QRIWAPLL	8	Unmodified	_QRIWAPLL_					0	0	0		ENST00000490180.2_1_14:65197520-65198405:+|nuORF	ENST00000490180.2_1_14:65197520-65198405:+|nuORF	ENST00000490180.2_1_14:65197520-65198405:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8036804199219	2	498.803094	995.591636	-0.601	-0.00029978	1.7229	0.00085937	1.1219	0.00055959	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.81548	1	4641	4641		20.482	0	1	2240900			45893	12665	30853	30866	51862	51862					0.09366360785031702
QRKKLLLQ	8	Unmodified	_QRKKLLLQ_					0	0	0		ENST00000413340.5_2_6:117013233-117013486:+|nuORF	ENST00000413340.5_2_6:117013233-117013486:+|nuORF	ENST00000413340.5_2_6:117013233-117013486:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8428955078125	2	513.842751	1025.67095	1.2212	0.00062752	-1.0584	-0.00054384	0.16285	8.3681E-05	513.8420286733405	23.367	0.38921	22.793	22.575	22.965	-0.57415					12	7	2	0	0	0	0.91977	1	1050	1050		45.952	7.1458	1	47082			45894	11349	30854	30867	51863	51863					0.15914007739183944
QRKKQLGTPLP	11	Unmodified	_QRKKQLGTPLP_					0	0	0			REV__ENSG00000139719|ENST00000267199|VPS33A	REV__ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.3828735351562	2	633.388054	1264.76155	-0.1242	-7.8669E-05	-3.9397	-0.0024954	-4.0639	-0.002574	633.3858105087322	58.255	1.1923	58.241	57.672	58.864	-0.013721					76	54	2	0	0	0	0.74022	1	4932	4932		20.947	8.1352	1	113070	+		45895	19564	30855	30868	51864	51864					0.13976431996820793
QRKLLPSAS	9	Unmodified	_QRKLLPSAS_					0	0	0		ENST00000449714.1_1_2:150444067-150444316:+|nuORF	ENST00000449714.1_1_2:150444067-150444316:+|nuORF	ENST00000449714.1_1_2:150444067-150444316:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.7977294921875	2	500.300916	998.587279	-0.49899	-0.00024965	-1.8368	-0.00091894	-2.3358	-0.0011686	500.7979207845338	94.274	1.5127	94.502	94.118	95.631	0.22863					94	36	5	0	0	0	0.7932	1	9626	9626		23.042	1.0826	1	781760			45896	11879	30856	30869	51865	51865					0.08792851571467963
QRKRKSVTFSK	11	Unmodified	_QRKRKSVTFSK_					0	0	0		ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.60833740234375	3	455.608882	1363.80482	-1.2087	-0.00055071	0.20199	9.203E-05	-1.0067	-0.00045868	455.6088629206426	71.18	2.4746	71.313	70.49	72.965	0.13356					216	101	3	0	0	0	0.76384	1	6468	6468		18.966	0	1	705050			45897	10162	30857	30870	51866	51866					0.13746621774066625
QRKRKSVTFSK	11	Unmodified	_QRKRKSVTFSK_					0	0	0		ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.9420471191406	3	455.608882	1363.80482	0.49166	0.00022401	-1.6077	-0.0007325	-1.1161	-0.0005085	455.608083696801	71.141	2.3916	71.271	70.4	72.791	0.12965					199	101	2	0	0	0	0.76942	1	6590	6590		17.722	0.55478	1	552710			45898	10162	30857	30870	51867	51867					0.13746621774066625
QRKRKSVTFSK	11	Unmodified	_QRKRKSVTFSK_					0	0	0		ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6074523925781	3	455.608882	1363.80482	-1.0996	-0.00050099	-0.27784	-0.00012659	-1.3774	-0.00062757	455.608769026608	69.403	0.69586	69.468	69.035	69.731	0.065506					64	33	3	0	0	0	0.74672	1	6252	6252		22.781	0.21979	1	225360			45899	10162	30857	30870	51868	51868					0.13746621774066625
QRKRKSVTFSK	11	Unmodified	_QRKRKSVTFSK_					0	0	0		ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6087341308594	3	455.608882	1363.80482	-0.02024	-9.2214E-06	-1.0093	-0.00045987	-1.0296	-0.00046909	455.608304720296	65.806	3.5163	66.359	63.877	67.393	0.5526					173	94	4	0	0	0	0.68764	1	6878	6878		33.542	7.6498	1	1863500			45900	10162	30857	30870	51869	51869					0.13746621774066625
QRKRKSVTFSK	11	Unmodified	_QRKRKSVTFSK_					0	0	0		ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	ENST00000335681.9_1_2:101521220-101549455:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.9425354003906	3	455.608882	1363.80482	-0.22489	-0.00010246	-0.74709	-0.00034038	-0.97198	-0.00044284	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.79476	1	7341	7341		12.433	2.3289	1	1863900			45901	10162	30857	30870	51870	51870					0.13746621774066625
QRKRMHRPEVR	11	Unmodified	_QRKRMHRPEVR_					0	0	0		ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.282470703125	3	498.284515	1491.83172	-0.64576	-0.00032177	-2.3123	-0.0011522	-2.9581	-0.001474	498.28330584065924	33.322	0.54781	33.368	33.139	33.687	0.045853					57	23	4	0	0	0	0.78083	1	1603	1603		15.337	1.2515	1	213640			45902	5236	30858	30871	51871	51871					0.10547407113608642
QRKSAAVG	8	Unmodified	_QRKSAAVG_					0	0	0			REV__ENST00000486103.6_1_17:58031378-58035783:-|nuORF	REV__ENST00000486103.6_1_17:58031378-58035783:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.7392272949219	2	408.737951	815.46135	-0.047648	-1.9476E-05	4.4202	0.0018067	4.3725	0.0017872	408.73963408946304	36.955	2.5653	36.931	36.681	39.246	-0.023975					119	58	3	0	0	0	0.90465	1	2387	2387		40.573	3.4135	1	457600	+		45903	23059	30859	30872	51872	51872					0.04623764786049378
QRKSLKLKRE	10	Unmodified	_QRKSLKLKRE_					0	0	0			REV__ENST00000462759.5_1_1:52212388-52215826:+|nuORF	REV__ENST00000462759.5_1_1:52212388-52215826:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4072265625	2	643.406778	1284.799	-1.1464	-0.00073758	1.3668	0.00087939	0.22041	0.00014181	643.4076175151858	107.74	0.83601	107.77	107.1	107.93	0.036125					77	20	5	0	0	0	0.86587	1	11434	11434		29.17	3.596	1	3329000	+		45904	27063	30860	30873	51873	51873					0.16799523262420735
QRKTLPGN	8	Unmodified	_QRKTLPGN_					0	0	0		ENST00000394767.2_1_4:105413137-105416015:-|nuORF	ENST00000394767.2_1_4:105413137-105416015:-|nuORF	ENST00000394767.2_1_4:105413137-105416015:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.26385498046875	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.87064	1	8090	8090		29.15	1.2673	1	4814400			45905	11077	30861	30874	51874	51874					0.05435722848869773
QRKTLPGN	8	Unmodified	_QRKTLPGN_					0	0	0		ENST00000394767.2_1_4:105413137-105416015:-|nuORF	ENST00000394767.2_1_4:105413137-105416015:-|nuORF	ENST00000394767.2_1_4:105413137-105416015:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2635803222656	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.86677	1	7500	7500		27.882	1.1893	1	1262800			45906	11077	30861	30874	51875	51875					0.05435722848869773
QRKTLPGN	8	Unmodified	_QRKTLPGN_					0	0	0		ENST00000394767.2_1_4:105413137-105416015:-|nuORF	ENST00000394767.2_1_4:105413137-105416015:-|nuORF	ENST00000394767.2_1_4:105413137-105416015:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2640075683594	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.87064	1	7745	7745		29.15	3.6994	1	4061400			45907	11077	30861	30874	51876	51876					0.05435722848869773
QRKTLPGN	8	Unmodified	_QRKTLPGN_					0	0	0		ENST00000394767.2_1_4:105413137-105416015:-|nuORF	ENST00000394767.2_1_4:105413137-105416015:-|nuORF	ENST00000394767.2_1_4:105413137-105416015:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2628173828125	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.89494	1	9723	9723		37.159	0	1	3505500			45908	11077	30861	30874	51877	51877					0.05435722848869773
QRKVKCIDV	9	Unmodified	_QRKVKCIDV_					0	0	0		ENSG00000165591|ENST00000374900|FAAH2	ENSG00000165591|ENST00000374900|FAAH2	ENSG00000165591|ENST00000374900|FAAH2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.8184204101562	2	544.815876	1087.6172	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.977	1	16.897	16.397	17.397	-0.079056								0	0	0	0.32469	1	173	173		21.96	0	1				45909	6098	30862	30875	51878	51878					0.07689467245154447
QRLALPVW	8	Unmodified	_QRLALPVW_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.29644775390625	2	491.795269	981.575986	-2.2672	-0.001115	3.2317	0.0015893	0.96443	0.0004743	491.79705126035327	67.243	0.7262	67.272	67.037	67.763	0.028587					47	29	2	0	0	0	0.87276	1	6392	6392		29.842	1.5873	1	84975			45910	15003;5274	30863	30876	51879	51879					0.08446074267988024
QRLALPVW	8	Unmodified	_QRLALPVW_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7948303222656	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.86288	1	3339	3339		26.796	1.3459	1	3201400			45911	15003;5274	30863	30876	51880	51880					0.08446074267988024
QRLAQPGN	8	Unmodified	_QRLAQPGN_					0	0	0			REV__ENST00000515682.5_1_4:8207046-8242679:+|nuORF	REV__ENST00000515682.5_1_4:8207046-8242679:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2415466308594	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.89494	1	7417	7417		37.159	4.3467	1	1219900	+		45912	18626	30864	30877	51881	51881					0.021228632977113193
QRLAVLEEE	9	Unmodified	_QRLAVLEEE_					0	0	0		nc|ENSG00000082512|O00463-3|TRAF5;ENSG00000082512|ENST00000261464|TRAF5;nc|ENSG00000082512|O00463-2|TRAF5	nc|ENSG00000082512|O00463-3|TRAF5	nc|ENSG00000082512|O00463-3|TRAF5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.795166015625	2	543.793121	1085.57169	0.4756	0.00025863	4.3931	0.002389	4.8687	0.0026476	543.795425902486	28.837	0.74174	28.664	28.365	29.107	-0.17336					38	16	3	0	0	0	0.69624	1	1811	1811		40.778	0	1	417870			45913	1486	30865	30878	51882	51882					0.032325202637593975
QRLEDRARLPR	11	Unmodified	_QRLEDRARLPR_					0	0	0		ENSG00000174292|ENST00000688331|TNK1;nc|ENSG00000174292|Q13470|TNK1	ENSG00000174292|ENST00000688331|TNK1	ENSG00000174292|ENST00000688331|TNK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.94342041015625	3	470.607652	1408.80113	0.38125	0.00017942	-2.5929	-0.0012203	-2.2117	-0.0010408	470.9408011908062	57.072	1.2961	57.178	56.709	58.005	0.10549					115	61	2	0	0	0	0.77511	1	4801	4801		16.53	3.5724	1	253800			45914	6924	30866	30879	51883	51883					0.11307952000197474
QRLEIMERRLD	11	Unmodified	_QRLEIMERRLD_					0	0	0			REV__ENSG00000090447|ENST00000204517|TFAP4	REV__ENSG00000090447|ENST00000204517|TFAP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.9312744140625	3	486.933037	1457.77728	-1.8417	-0.00089677	-1.5106	-0.00073556	-3.3523	-0.0016323	486.93222838305667	30.711	1.274	30.711	30.137	31.411	0					107	45	3	0	0	0	0.77803	1	1422	1422		15.921	0.58754	1	376410	+		45915	16987	30867	30880	51884	51884					0.06670350451508966
QRLFKRSKE	9	Unmodified	_QRLFKRSKE_					0	0	0			REV__nc|ENSG00000116580|Q3T8J9-3|GON4L	REV__nc|ENSG00000116580|Q3T8J9-3|GON4L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3544921875	2	596.351471	1190.68839	0.66636	0.00039738	3.067	0.001829	3.7334	0.0022264	596.3531027493411	32.676	0.76283	32.887	32.55	33.313	0.21168					43	17	4	0	0	0	0.47272	1	2345	2345		53.351	3.8154	1	1154900	+		45916	18204	30868	30881	51885	51885					0.10067303274149708
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2272644042969	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.85277	5	7409	7150;7193;7218;7272;7409		40.573	10.924	1	419890	+		45917	25349	30869	30882	51886;51887;51888;51889;51890	51890					0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2271423339844	2	420.227751	838.440949	-0.18786	-7.8944E-05	0.38594	0.00016218	0.19808	8.324E-05	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.91472	1	7368	7368		44.117	12.162	1	279000	+		45918	25349	30869	30882	51891	51891					0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.22747802734375	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.90465	1	7756	7756		40.573	1.3198	1	743780	+		45919	25349	30869	30882	51892	51892					0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.22686767578125	2	420.227751	838.440949	-0.26172	-0.00010998	0.48315	0.00020303	0.22143	9.305E-05	420.2278427718772	76.28	2.2676	76.231	74.595	76.863	-0.048271					136	69	3	0	0	0	0.89043	1	7545	7545		35.618	0	1	253020	+		45920	25349	30869	30882	51893	51893					0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2269287109375	2	420.227751	838.440949	2.3003	0.00096666	-2.0316	-0.00085375	0.26868	0.00011291	420.2267541958877	76.314	2.1809	76.362	74.634	76.815	0.047974					151	68	3	0	0	0	0.89494	2	7399	7389;7399		42.474	6.8562	1	250270	+		45921	25349	30869	30882	51894;51895	51895					0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2272644042969	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.884	1	7956	7956		33.516	3.0119	1	961790	+		45922	25349	30869	30882	51896	51896					0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2273254394531	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.87922	3	7308	7308;7512;7624		42.474	3.0119	1	831720	+		45923	25349	30869	30882	51897;51898;51899	51897					0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2275085449219	2	420.227751	838.440949	0.51188	0.00021511	-0.42574	-0.00017891	0.086147	3.6201E-05	420.22745728477395	76.673	2.5132	76.808	74.515	77.028	0.13478					135	81	3	0	0	0	0.86677	1	7091	7091		27.882	2.4321	1	323390	+		45924	25349	30869	30882	51900	51900					0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22760009765625	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.87922	2	7625	7625;7737		33.516	4.366	1	678130	+		45925	25349	30869	30882	51901;51902	51901					0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2274475097656	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.87479	3	7331	7331;7521;7577		42.474	14.22	1	634680	+		45926	25349	30869	30882	51903;51904;51905	51903					0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.22735595703125	2	420.227751	838.440949	0.39025	0.000164	-0.22921	-9.6321E-05	0.16104	6.7675E-05	420.2275761359418	78.73	4.4768	79.141	77.509	81.986	0.4106					178	106	2	0	0	0	0.87922	2	9084	9018;9084		33.516	3.0119	1	423290	+		45927	25349	30869	30882	51906;51907	51907					0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	420.227751	838.440949	-0.14628	-6.1471E-05	0.062071	2.6084E-05	-0.084209	-3.5387E-05	420.2277158662232	77.18	0.66733	77.13	76.861	77.529	-0.049355	0.19906	-0.00043471	NaN	44.117	50	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	317770	+		45928	25349	30869	30882							0.015265941262214255
QRLGHAAS	8	Unmodified	_QRLGHAAS_					0	0	0			REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	REV__ENST00000590735.1_1_17:40066500-40075203:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	420.227751	838.440949	0.71967	0.00030243	-0.64258	-0.00027003	0.077095	3.2397E-05	420.22741227453565	76.597	0.97552	76.996	76.162	77.138	0.39969	0.064951	-0.0010269	NaN	44.117	35	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121780	+		45929	25349	30869	30882							0.015265941262214255
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79595947265625	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.86791	1	3626	3626		28.254	0	1	2891800			45930	12598	30870	30883	51908	51908					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7953186035156	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.86791	2	4044	4044;4224		28.254	1.4582	1	1240000			45931	12598	30870	30883	51909;51910	51909					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7965393066406	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.81548	2	4295	4295;4474		37.028	12.826	1	781720			45932	12598	30870	30883	51911;51912	51911					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7962646484375	2	491.795269	981.575986	0.16895	8.3091E-05	0.70742	0.00034791	0.87638	0.000431	491.795491652363	46.653	1.8507	46.639	45.976	47.827	-0.013821					152	52	4	0	0	0	0.88915	1	3875	3875		35.201	6.9464	1	2674700			45933	12598	30870	30883	51913	51913					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7957458496094	2	491.795269	981.575986	0.019467	9.5736E-06	1.1365	0.00055891	1.1559	0.00056849	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.86791	1	4477	4477		28.254	2.8041	1	310050			45934	12598	30870	30883	51914	51914					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7955627441406	2	491.795269	981.575986	-0.0088364	-4.3457E-06	1.0535	0.0005181	1.0447	0.00051376	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.82464	3	4548	4524;4548;4811		37.028	6.5248	1	782460			45935	12598	30870	30883	51915;51916;51917	51916					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79595947265625	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.82464	2	4757	4585;4757		28.254	5.2118	1	703950			45936	12598	30870	30883	51918;51919	51919					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.795654296875	2	491.795269	981.575986	-2.0878	-0.0010268	2.9764	0.0014638	0.88855	0.00043698	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.86791	1	5020	5020		28.254	0	1	1484300			45937	12598	30870	30883	51920	51920					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958984375	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.86288	1	3385	3385		26.796	2.5934	1	2747400			45938	12598	30870	30883	51921	51921					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7962646484375	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.81548	1	4583	4583		20.482	0	1	1759500			45939	12598	30870	30883	51922	51922					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7952575683594	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.81548	2	3809	3651;3809		35.201	3.2459	1	1346800			45940	12598	30870	30883	51923;51924	51924					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79583740234375	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.81548	1	4653	4653		20.482	2.1574	1	2075300			45941	12598	30870	30883	51925	51925					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7954406738281	2	491.795269	981.575986	-1.1725	-0.00057664	2.0381	0.0010023	0.86553	0.00042567	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.86288	1	4418	4418		26.796	0	1	3001500			45942	12598	30870	30883	51926	51926					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7966613769531	2	491.795269	981.575986	-0.48962	-0.00024079	1.5802	0.00077716	1.0906	0.00053636	491.7959072795416	52.767	1.4912	53.191	52.596	54.087	0.42348					103	35	4	0	0	0	0.88915	1	5257	5257		35.201	3.2459	1	2146400			45943	12598	30870	30883	51927	51927					0.08446074267999393
QRLGPLWL	8	Unmodified	_QRLGPLWL_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7961120605469	2	491.795269	981.575986	-0.91317	-0.00044909	1.7019	0.00083701	0.78877	0.00038791	491.79595933805444	45.694	2.2667	46.589	46.327	48.594	0.89542					151	55	4	0	0	0	0.82464	1	4403	4403		21.702	0.7554	1	3110500			45944	12598	30870	30883	51928	51928					0.08446074267999393
QRLHARAHSAL	11	Unmodified	_QRLHARAHSAL_					0	0	0			REV__nc|ENSG00000011451|O95785|WIZ	REV__nc|ENSG00000011451|O95785|WIZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.5760192871094	3	420.574172	1258.70069	-0.42349	-0.00017811	3.2089	0.0013496	2.7854	0.0011715	420.5754266268904	46.91	0.91414	46.822	46.39	47.304	-0.087646					74	26	4	0	0	0	0.70584	1	3507	3507		30.569	4.5055	1	1050400	+		45945	16186	30871	30884	51929	51929					0.08168339737221686
QRLIKIERIA	10	Unmodified	_QRLIKIERIA_					0	0	0			REV__nc|ENSG00000167258|Q9NYV4-3|CDK12	REV__nc|ENSG00000167258|Q9NYV4-3|CDK12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9327087402344	3	413.934706	1238.78229	-1.8924	-0.00078334	-2.7536	-0.0011398	-4.6461	-0.0019232	413.93347709098015	44.87	2.8248	44.882	43.566	46.391	0.012058					191	71	4	0	0	0	0.85259	1	3090	3090		20.03	4.0237	1	675440	+		45946	21370	30872	30885	51930	51930					0.17245022376482666
QRLILELQNVK	11	Unmodified	_QRLILELQNVK_					0	0	0			REV__ENSG00000116991|ENST00000674635|SIPA1L2	REV__ENSG00000116991|ENST00000674635|SIPA1L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.943359375	3	451.945271	1352.81398	-1.2962	-0.0005858	-3.44	-0.0015547	-4.7362	-0.0021405	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.72892	2	4366	4358;4366		26.75	9.583	1	734340	+		45947	18239	30873	30886	51931;51932	51932					0.15168970339732368
QRLIVLEHR	9	Unmodified	_QRLIVLEHR_					0	0	0		ENSG00000083097|ENST00000349129|DOP1A	ENSG00000083097|ENST00000349129|DOP1A	ENSG00000083097|ENST00000349129|DOP1A	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3545532226562	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.48	1	116.45	115.95	116.95	-0.02433								0	0	0	0.32469	1	12899	12899		21.96	1.013	1				45948	1496	30874	30887	51933	51933					0.11863607136797327
QRLKPPPNR	9	Unmodified	_QRLKPPPNR_					0	0	0			REV__ENSG00000095777|ENST00000642920|MYO3A	REV__ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.332275390625	2	553.333082	1104.65161	-1.4413	-0.00079751	0.24372	0.00013486	-1.1976	-0.00066265	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.78536	1	9996	9996		29.15	3.5755	1	2490200	+		45949	17068	30875	30888	51934	51934					0.10347051448275124
QRLLKWMYKFR	11	Unmodified	_QRLLKWMYKFR_					0	0	0			REV__ENSG00000118434|ENST00000237201|SPACA1	REV__ENSG00000118434|ENST00000237201|SPACA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.9693603515625	3	523.634263	1567.88096	-0.4869	-0.00025496	1.2056	0.00063132	0.71874	0.00037636	523.6348544015394	45.351	1.4658	45.32	44.929	46.395	-0.031067					110	33	5	0	0	0	0.7896	1	3712	3712		13.508	1.0751	1	2727200	+		45950	18311	30876	30889	51935	51935					0.1197330234981564
QRLLKWMYKFR	11	Unmodified	_QRLLKWMYKFR_					0	0	0			REV__ENSG00000118434|ENST00000237201|SPACA1	REV__ENSG00000118434|ENST00000237201|SPACA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.6347045898438	3	523.634263	1567.88096	0.080577	4.2193E-05	0.47994	0.00025131	0.56051	0.0002935	523.6344818031575	45.362	1.5324	45.358	44.881	46.413	-0.0041618					112	35	6	0	0	0	0.81021	1	3632	3632		9.2118	3.513	1	2358800	+		45951	18311	30876	30889	51936	51936					0.1197330234981564
QRLLNQKPLSL	11	Unmodified	_QRLLNQKPLSL_					0	0	0		nc|ENSG00000148356|Q6UWE0-3|LRSAM1;ENST00000483302.5_1_9:130248105-130265175:+|nuORF;nc|ENSG00000148356|Q6UWE0-2|LRSAM1;ENSG00000148356|ENST00000300417|LRSAM1	nc|ENSG00000148356|Q6UWE0-3|LRSAM1	nc|ENSG00000148356|Q6UWE0-3|LRSAM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.6026916503906	3	437.269866	1308.78777	-1.7045	-0.00074531	-2.8139	-0.0012304	-4.5184	-0.0019757	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.77205	1	4404	4404		17.167	0	1	3449100			45952	4955	30877	30890	51937	51937					0.1457270116827658
QRLMQEHKLKV	11	Unmodified	_QRLMQEHKLKV_					0	0	0		ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-4|ELAC2;ENSG00000006744|ENST00000338034|ELAC2	ENST00000484122.5_1_17:12899737-12920449:-|nuORF	ENST00000484122.5_1_17:12899737-12920449:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.9393310546875	3	470.606373	1408.79729	-0.32405	-0.0001525	0.46198	0.00021741	0.13793	6.4913E-05	470.6063856598867	15.886	0.18743	15.806	15.726	15.913	-0.080017					19	8	3	0	0	0	0.75457	1	61	61		21.032	1.4053	1	84087			45953	712	30878	30891	51938	51938					0.10924146182128425
QRLPVIAQGP	10	Unmodified	_QRLPVIAQGP_					0	0	0		nc|ENSG00000137968|Q8NCS7|SLC44A5;nc|ENSG00000137968|Q8NCS7-5|SLC44A5;ENSG00000137968|ENST00000370859|SLC44A5	nc|ENSG00000137968|Q8NCS7|SLC44A5	nc|ENSG00000137968|Q8NCS7|SLC44A5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.8240356445312	2	539.822015	1077.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.405	1	39.96	39.46	40.46	0.55449								0	0	0	0.45132	1	3314	3314		32.812	3.6629	1				45954	14949	30879	30892	51939	51939					0.09376826979860198
QRLQGPAGG	9	Unmodified	_QRLQGPAGG_					0	0	0			REV__ENSG00000158008|ENST00000374280|EXTL1	REV__ENSG00000158008|ENST00000374280|EXTL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2408447265625	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.69914	1	7638	7638		40.573	1.7665	1	716910	+		45955	20579	30880	30893	51940	51940					0.021228632977113193
QRLQGPAGG	9	Unmodified	_QRLQGPAGG_					0	0	0			REV__ENSG00000158008|ENST00000374280|EXTL1	REV__ENSG00000158008|ENST00000374280|EXTL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2406311035156	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.72402	1	7908	7908		38.806	1.647	1	1068200	+		45956	20579	30880	30893	51941	51941					0.021228632977113193
QRLRKWRRERH	11	Unmodified	_QRLRKWRRERH_					0	0	0		ENST00000563197.5_2_16:30007482-30007590:+|nuORF	ENST00000563197.5_2_16:30007482-30007590:+|nuORF	ENST00000563197.5_2_16:30007482-30007590:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.9859619140625	3	540.985457	1619.93454	0.51187	0.00027692	0.020146	1.0899E-05	0.53202	0.00028782	541.3196690977402	16.067	0.14541	15.987	15.913	16.058	-0.080017					10	5	3	0	0	0	0.88916	1	78	78		3.4087	0	1	36159			45957	13861	30881	30894	51942	51942					0.14937235896559287
QRLRLTPE	8	Unmodified	_QRLRLTPE_					0	0	0		ENSG00000237172|ENST00000449549|B3GNT9	ENSG00000237172|ENST00000449549|B3GNT9	ENSG00000237172|ENST00000449549|B3GNT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8003845214844	2	506.79854	1011.58253	0.2762	0.00013998	4.2956	0.002177	4.5718	0.002317	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.89494	1	3543	3543		37.159	3.6435	1	416790			45958	8757	30882	30895	51943	51943					0.07719967428704422
QRLSWIIRAS	10	Unmodified	_QRLSWIIRAS_					0	0	0			REV__ENSG00000182782|ENST00000328880|HCAR2	REV__ENSG00000182782|ENST00000328880|HCAR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	615.3579711914062	2	615.359296	1228.70404	0.91539	0.00056329	-4.0395	-0.0024857	-3.1241	-0.0019224	615.356833413619	104.5	2.6486	104.62	104.11	106.76	0.11684					178	65	4	0	0	0	0.86471	1	11119	11119		30.318	3.2704	1	3488600	+		45959	22549	30883	30896	51944	51944					0.09883589791229497
QRLTLRGP	8	Unmodified	_QRLTLRGP_					0	0	0			REV__ENST00000496634.2_1_11:62341216-62341447:-|nuORF	REV__ENST00000496634.2_1_11:62341216-62341447:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.27215576171875	2	470.787976	939.561398	-0.11067	-5.2101E-05	-0.49585	-0.00023344	-0.60652	-0.00028554	470.78771989827595	92.471	0.89881	92.541	92.155	93.054	0.06987					26	20	2	0	0	0	0.4196	1	9563	9563		42.396	14.514	1	68258	+		45960	27754	30884	30897	51945	51945					0.08920002119862147
QRLVAQRLLI	10	Unmodified	_QRLVAQRLLI_					0	0	0			REV__ENSG00000160951|ENST00000292513|PTGER1	REV__ENSG00000160951|ENST00000292513|PTGER1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.9295654296875	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.85441	1	3739	3739		20.837	3.004	1	2526100	+		45961	20751	30885	30898	51946	51946					0.1756903972204782
QRLVAQRLLI	10	Unmodified	_QRLVAQRLLI_					0	0	0			REV__ENSG00000160951|ENST00000292513|PTGER1	REV__ENSG00000160951|ENST00000292513|PTGER1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9295959472656	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.85285	1	4033	4033		16.717	1.3843	1	2612300	+		45962	20751	30885	30898	51947	51947					0.1756903972204782
QRLVAQRLLI	10	Unmodified	_QRLVAQRLLI_					0	0	0			REV__ENSG00000160951|ENST00000292513|PTGER1	REV__ENSG00000160951|ENST00000292513|PTGER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9295959472656	3	403.931185	1208.77173	-1.8895	-0.00076324	-2.2243	-0.00089846	-4.1138	-0.0016617	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.85441	2	3649	3649;3661		20.837	1.3131	1	2300300	+		45963	20751	30885	30898	51948;51949	51948					0.1756903972204782
QRLVEALEE	9	Unmodified	_QRLVEALEE_					0	0	0		nc|ENSG00000102871|Q15628-2|TRADD;ENSG00000102871|ENST00000345057|TRADD	nc|ENSG00000102871|Q15628-2|TRADD	nc|ENSG00000102871|Q15628-2|TRADD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.7963256835938	2	543.793121	1085.57169	0.4756	0.00025863	4.3931	0.002389	4.8687	0.0026476	543.795425902486	28.837	0.74174	28.664	28.365	29.107	-0.17336					38	16	3	0	0	0	0.22631	1	1785	1785		71.296	1.6681	1	417870			45964	2026	30886	30899	51950	51950					0.032325202637593975
QRLVGFVL	8	Unmodified	_QRLVGFVL_					0	0	0		nc|ENSG00000171365|P51795-1|CLCN5;ENSG00000171365|ENST00000376091|CLCN5	nc|ENSG00000171365|P51795-1|CLCN5	nc|ENSG00000171365|P51795-1|CLCN5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.28973388671875	2	466.28982	930.565087	-1.3157	-0.00061351	1.5891	0.00074096	0.27333	0.00012745	466.29039897325373	74.355	0.67729	74.355	74.138	74.815	0					55	29	3	0	0	0	0.89457	1	6722	6722		37.028	0	1	318180			45965	6661	30887	30900	51951	51951					0.09702671893705883
QRLVGFVL	8	Unmodified	_QRLVGFVL_					0	0	0		nc|ENSG00000171365|P51795-1|CLCN5;ENSG00000171365|ENST00000376091|CLCN5	nc|ENSG00000171365|P51795-1|CLCN5	nc|ENSG00000171365|P51795-1|CLCN5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.28863525390625	2	466.28982	930.565087	-0.64111	-0.00029894	0.64441	0.00030048	0.0033003	1.5389E-06	466.28999408550436	73.948	1.2575	73.992	73.721	74.978	0.043648					98	48	3	0	0	0	0.9159	1	7116	7116		44.531	0	1	991630			45966	6661	30887	30900	51952	51952					0.09702671893705883
QRMDMLPG	8	Unmodified	_QRMDMLPG_					0	0	0			REV__ENST00000506393.5_1_5:140047926-140048692:+|nuORF	REV__ENST00000506393.5_1_5:140047926-140048692:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	474.2236328125	2	474.225505	946.436457	-1.0302	-0.00048856	-4.3486	-0.0020622	-5.3788	-0.0025508	474.2236350594803	69.117	0.65221	69.182	68.918	69.571	0.065514					56	29	3	0	0	0	0.86677	1	6225	6225		27.882	5.9224	1	381450	+		45967	18406	30888	30901	51953	51953					-0.0389037440318134
QRMKKRKHKL	10	Unmodified	_QRMKKRKHKL_					0	0	0			REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.6206970214844	3	451.618835	1351.83468	0.30522	0.00013784	2.5385	0.0011464	2.8437	0.0012843	451.61995320650186	17.293	0.48307	16.682	16.52	17.003	-0.6107					24	10	3	0	0	0	0.86698	1	252	252		28.081	1.0342	1	302760	+		45968	26885	30889	30902	51954	51954					0.17283282238417996
QRMKKRKHKL	10	Unmodified	_QRMKKRKHKL_					0	0	0			REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	451.618835	1351.83468	-2.1643	-0.00097744	4.7888	0.0021627	2.6245	0.0011853	451.95526335402275	16.764	0.18353	16.764	16.678	16.861	0	0.056558	0.0026152	NaN	28.081	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39078	+		45969	26885	30889	30902							0.17283282238417996
QRMKKRKHKL	10	Unmodified	_QRMKKRKHKL_					0	0	0			REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	451.618835	1351.83468	-1.3625	-0.00061531	4.4932	0.0020292	3.1307	0.0014139	451.6208262335491	16.648	0.51984	16.694	16.35	16.87	0.046259	-0.013443	0.0022147	NaN	28.081	46	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118380	+		45970	26885	30889	30902							0.17283282238417996
QRMKKRKHKL	10	Unmodified	_QRMKKRKHKL_					0	0	0			REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	451.618835	1351.83468	0.033964	1.5339E-05	2.6444	0.0011943	2.6784	0.0012096	451.62009600774013	16.634	0.43091	16.693	16.338	16.769	0.059269	-0.014247	-0.00029009	NaN	28.081	32	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112560	+		45971	26885	30889	30902							0.17283282238417996
QRMKKRKHKL	10	Unmodified	_QRMKKRKHKL_					0	0	0			REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	451.618835	1351.83468	0.61327	0.00027697	1.7142	0.00077417	2.3275	0.0010511	451.61961649396784	16.72	0.36998	16.696	16.477	16.847	-0.024035	-0.011021	-0.0015504	NaN	28.081	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120400	+		45972	26885	30889	30902							0.17283282238417996
QRMKKRKHKL	10	Unmodified	_QRMKKRKHKL_					0	0	0			REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	REV__ENST00000451383.1_1_2:67108241-67108316:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	451.618835	1351.83468	-0.249	-0.00011245	2.9622	0.0013378	2.7132	0.0012253	451.620119058691	17.197	0.4986	16.715	16.579	17.077	-0.48256	0.0071398	0.00014047	NaN	28.081	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	212120	+		45973	26885	30889	30902							0.17283282238417996
QRMNKALPAP	10	Unmodified	_QRMNKALPAP_					0	0	0		ENSG00000198075|ENST00000272452|SULT1C4	ENSG00000198075|ENST00000272452|SULT1C4	ENSG00000198075|ENST00000272452|SULT1C4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.7435302734375	2	563.3135	1124.61245	-0.27525	-0.00015505	-0.57486	-0.00032382	-0.85011	-0.00047888	563.3152941578246	45.477	0.36462	45.94	45.717	46.082	0.46313					13	8	3	0	0	0	0.37624	1	4216	4216		37.159	10.466	1	210060			45974	8233	30890	30903	51955	51955					0.05512583102404278
QRNLGMSM	8	Unmodified	_QRNLGMSM_					0	0	0		ENST00000506644.3_1_5:140083564-140085338:+|nuORF;ENSG00000146007|ENST00000274712|ZMAT2	ENST00000506644.3_1_5:140083564-140085338:+|nuORF	ENST00000506644.3_1_5:140083564-140085338:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.72332763671875	2	468.723129	935.431706	1.5416	0.00072257	-1.1643	-0.00054573	0.37727	0.00017684	468.7225776858063	103.87	1.2091	104.06	103.68	104.89	0.18887					87	29	4	0	0	0	0.84341	1	12671	12671		24.203	1.1603	1	1879100			45975	4813	30891	30904	51956	51956					-0.03859258545958255
QRPEIKYVLN	10	Unmodified	_QRPEIKYVLN_					0	0	0		nc|ENSG00000166750|Q08AF3-2|SLFN5;ENSG00000166750|ENST00000299977|SLFN5	nc|ENSG00000166750|Q08AF3-2|SLFN5	nc|ENSG00000166750|Q08AF3-2|SLFN5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.90887451171875	3	420.575067	1258.70337	0.054208	2.2798E-05	0.93584	0.00039359	0.99005	0.00041639	420.5753673707218	47.088	0.73682	47.074	46.65	47.387	-0.013817					48	19	3	0	0	0	0.86151	1	3836	3836		15.333	1.196	1	673640			45976	6227	30892	30905	51957	51957					0.08436750351506817
QRPGDFPM	8	Unmodified	_QRPGDFPM_					0	0	0		nc|ENSG00000186431|P24071-6|FCAR	nc|ENSG00000186431|P24071-6|FCAR	nc|ENSG00000186431|P24071-6|FCAR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2228698730469	2	474.22382	946.433086	0.65646	0.00031131	-2.0713	-0.00098227	-1.4149	-0.00067097	474.2226664298733	66.642	1.4894	67.027	66.622	68.112	0.38541					75	41	3	0	0	0	0.92973	1	7276	7276		50.025	11.218	1	883560			45977	15158	30893	30906	51958	51958					-0.04227301185551369
QRPGVACL	8	Unmodified	_QRPGVACL_					0	0	0			REV__ENST00000290573.6_1_2:75061370-75061754:+|nuORF	REV__ENST00000290573.6_1_2:75061370-75061754:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.22845458984375	2	422.228905	842.443257	0.38075	0.00016076	-3.2224	-0.0013606	-2.8417	-0.0011998	422.22752903910396	61.401	1.1417	61.52	61.387	62.529	0.11901					70	54	2	0	0	0	0.86791	1	5398	5398		28.254	2.8041	1	712460	+		45978	24657	30894	30907	51959	51959					0.015733065396602797
QRPKHGVL	8	Unmodified	_QRPKHGVL_					0	0	0			REV__nc|ENSG00000158079|A2A3K4|PTPDC1	REV__nc|ENSG00000158079|A2A3K4|PTPDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.78253173828125	2	467.782693	933.550834	-0.25741	-0.00012041	0.27471	0.00012851	0.017303	8.0942E-06	467.78264184327145	30.346	0.69899	30.279	29.984	30.683	-0.066113					39	15	4	0	0	0	0.89457	1	1984	1984		37.028	3.5129	1	679190	+		45979	15938	30895	30908	51960	51960					0.08140019465417936
QRPLLPSS	8	Unmodified	_QRPLLPSS_					0	0	0			REV__ENSG00000115183|ENST00000263635|TANC1	REV__ENSG00000115183|ENST00000263635|TANC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2605895996094	2	449.261259	896.507966	-0.031705	-1.4244E-05	-1.4161	-0.00063622	-1.4478	-0.00065046	449.26046135217877	71.325	1.0336	71.873	71.284	72.317	0.54756					58	24	3	0	0	0	0.89962	1	7983	7983		38.806	4.6336	1	1233100	+		45980	18091	30896	30909	51961	51961					0.05557204617343814
QRPLLPSS	8	Unmodified	_QRPLLPSS_					0	0	0			REV__ENSG00000115183|ENST00000263635|TANC1	REV__ENSG00000115183|ENST00000263635|TANC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	449.261259	896.507966	-1.3095	-0.00058829	0.44678	0.00020072	-0.86269	-0.00038757	449.2614708585104	71.431	0.054611	71.565	71.529	71.584	0.13356	-0.21172	0.0010903	NaN	38.806	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29569	+		45981	18091	30896	30909							0.05557204617343814
QRPPPPPKL	9	Unmodified	_QRPPPPPKL_					0	0	0			REV__nc|ENSG00000179168|Q86UU5-3|GGN	REV__nc|ENSG00000179168|Q86UU5-3|GGN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3157958984375	2	515.313826	1028.6131	1.0881	0.00056071	3.0649	0.0015794	4.153	0.0021401	515.3153446059962	21.977	0.57329	21.534	21.235	21.808	-0.44324					27	12	3	0	0	0	0.7932	1	853	853		21.96	0	1	163770	+		45982	22322	30897	30910	51962	51962					0.09993745813744681
QRPRKLNPR	9	Unmodified	_QRPRKLNPR_					0	0	0		ENST00000459771.5_1_15:99781578-99781722:-|nuORF	ENST00000459771.5_1_15:99781578-99781722:-|nuORF	ENST00000459771.5_1_15:99781578-99781722:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.8572998046875	2	582.857255	1163.69996	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.82	1	113.84	113.34	114.34	0.020027								0	0	0	0.34348	1	13743	13743		16.473	0	1				45983	11994	30898	30911	51963	51963					0.12465545088184626
QRPRPSKRRA	10	Unmodified	_QRPRPSKRRA_					0	0	0		ENSG00000179715|ENST00000546455|PCED1B	ENSG00000179715|ENST00000546455|PCED1B	ENSG00000179715|ENST00000546455|PCED1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.92193603515625	3	417.921683	1250.74322	4.0685	0.0017003	-2.7205	-0.0011369	1.348	0.00056335	417.9204504044182	105.51	2.6111	105.69	104.89	107.5	0.18647					199	86	4	0	0	0	0.86621	1	12863	12863		26.063	3.5018	1	601650			45984	7290	30899	30912	51964	51964					0.12787734865469247
QRQAQEHY	8	Unmodified	_QRQAQEHY_					0	0	0		ENST00000602642.1_1_16:67697561-67697729:-|nuORF;nc|ENSG00000124074|Q9H0I2-2|ENKD1;ENSG00000124074|ENST00000243878|ENKD1	ENST00000602642.1_1_16:67697561-67697729:-|nuORF	ENST00000602642.1_1_16:67697561-67697729:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2354125976562	2	530.251954	1058.48936	-0.88784	-0.00047078	2.0274	0.001075	1.1396	0.00060426	530.754819150367	40.221	0.4196	40.23	39.986	40.405	0.0092773					18	9	3	0	0	0	0.4196	1	2856	2856		33.516	1.5607	1	61858			45985	3301	30900	30913	51965	51965					-0.03754957024511896
QRQELLVKLL	10	Unmodified	_QRQELLVKLL_					0	0	0		ENSG00000141219|ENST00000535032|C17orf80;nc|ENSG00000141219|Q9BSJ5-3|MTNAP1;nc|ENSG00000141219|Q9BSJ5-2|MTNAP1	ENSG00000141219|ENST00000535032|C17orf80	ENSG00000141219|ENST00000535032|C17orf80	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.932373046875	3	413.930962	1238.77106	0.19564	8.098E-05	3.7972	0.0015718	3.9928	0.0016527	413.93253835270247	43.14	1.6907	43.113	41.995	43.686	-0.026768					75	40	2	0	0	0	0.8583	1	3302	3302		22.562	3.2989	1	425020			45986	4483	30901	30914	51966	51966					0.1612220028232514
QRQELLVKLL	10	Unmodified	_QRQELLVKLL_					0	0	0		ENSG00000141219|ENST00000535032|C17orf80;nc|ENSG00000141219|Q9BSJ5-3|MTNAP1;nc|ENSG00000141219|Q9BSJ5-2|MTNAP1	ENSG00000141219|ENST00000535032|C17orf80	ENSG00000141219|ENST00000535032|C17orf80	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.932861328125	3	413.930962	1238.77106	1.9789	0.00081913	2.3996	0.00099326	4.3785	0.0018124	413.9318701140447	44.846	2.3922	44.842	44.201	46.593	-0.0041618					170	56	4	0	0	0	0.86409	1	3478	3478		25.126	1.6033	1	713740			45987	4483	30901	30914	51967	51967					0.1612220028232514
QRQGLALSPRL	11	Unmodified	_QRQGLALSPRL_					0	0	0		ENST00000595069.5_2_10:75256229-75278577:+|nuORF	ENST00000595069.5_2_10:75256229-75278577:+|nuORF	ENST00000595069.5_2_10:75256229-75278577:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.869140625	2	619.870028	1237.7255	-1.2246	-0.00075908	0.04402	2.7286E-05	-1.1806	-0.0007318	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.70737	1	9654	9654		30.318	3.2704	1	3118800			45988	14326	30902	30915	51968	51968					0.11614974819917734
QRQLAANV	8	Unmodified	_QRQLAANV_					0	0	0			REV__ENSG00000137809|ENST00000315757|ITGA11	REV__ENSG00000137809|ENST00000315757|ITGA11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2608337402344	2	450.256508	898.498464	-0.12019	-5.4118E-05	2.3777	0.0010706	2.2575	0.0010165	450.25681710871464	68.008	0.24923	68.556	68.451	68.7	0.54819					7	5	2	0	0	0	0.4196	1	7490	7490		38.806	1.647	1	48407	+		45989	19409	30903	30916	51969	51969					0.045154363318033575
QRQPMPASM	9	2 Oxidation (M)	_QRQPM(Oxidation (M))PASM(Oxidation (M))_		QRQPM(1)PASM(1)		QRQPM(56)PASM(56)	0	0	2		ENST00000484383.1_1_7:28725767-28818567:+|nuORF;ENST00000468391.5_1_7:28725767-28763985:+|nuORF;ENST00000461921.5_1_7:28610093-28788935:+|nuORF;nc|ENSG00000146592|Q02930-4|CREB5;nc|ENSG00000146592|Q02930-3|CREB5;nc|ENSG00000146592|Q02930-2|CREB5;ENSG00000146592|ENST00000357727|CREB5	ENST00000484383.1_1_7:28725767-28818567:+|nuORF	ENST00000484383.1_1_7:28725767-28818567:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.244873046875	2	539.244426	1076.4743	0.01069	5.7646E-06	-3.9164	-0.0021119	-3.9057	-0.0021061	539.2422023240468	61.908	0.64518	62.016	61.631	62.276	0.10743					51	28	3	0	0	0	0.43338	1	5367	5367		55.504	9.5523	1	504150			45990	4853	30904	30917	51970	51970		84;85			-0.06087908208382942
QRQPSPAGG	9	Unmodified	_QRQPSPAGG_					0	0	0			REV__nc|ENSG00000173818|Q8N8Q3-6|ENDOV	REV__nc|ENSG00000173818|Q8N8Q3-6|ENDOV	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2326965332031	2	449.230491	896.446428	-1.619	-0.00072729	1.9511	0.00087651	0.33216	0.00014922	449.23133844286133	83.319	3.7519	83.457	82.118	85.87	0.13811					166	86	3	0	0	0	0.78058	1	8017	8017		30.504	2.2494	1	160270	+		45991	30038	30905	30918	51971	51971					-0.005937270819458718
QRRAQQLH	8	Unmodified	_QRRAQQLH_					0	0	0			REV__ENSG00000068323|ENST00000315869|TFE3	REV__ENSG00000068323|ENST00000315869|TFE3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.810791015625	2	518.791581	1035.56861	2.0526	0.0010649	0.76061	0.0003946	2.8132	0.0014595	518.7903451944242	100.06	0.26727	100.4	100.3	100.57	0.34591					8	6	2	0	0	0	0.4196	1	12162	12162		52.299	0	1	110110	+		45992	16556	30906	30919	51972	51972					0.05224734720286506
QRRDGPLV	8	Unmodified	_QRRDGPLV_					0	0	0		nc|ENSG00000138376|Q99728-3|BARD1;nc|ENSG00000138376|Q99728-2|BARD1;ENSG00000138376|ENST00000260947|BARD1	nc|ENSG00000138376|Q99728-3|BARD1	nc|ENSG00000138376|Q99728-3|BARD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.768798828125	2	470.769783	939.525013	-1.0178	-0.00047915	-1.0022	-0.0004718	-2.02	-0.00095095	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.89962	1	4344	4344		38.806	9.6566	1	1648400			45993	4290	30907	30920	51973	51973					0.05283125223149909
QRREEPLIKP	10	Unmodified	_QRREEPLIKP_					0	0	0		THE1D_dup11999|chr19:49328113-49328466:-|1.0328815182934572|0.3056025317610205|1.76|63.0|26|3|anti-sense	THE1D_dup11999|chr19:49328113-49328466:-|1.0328815182934572|0.3056025317610205|1.76|63.0|26|3|anti-sense	THE1D_dup11999|chr19:49328113-49328466:-|1.0328815182934572|0.3056025317610205|1.76|63.0|26|3|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5818176269531	3	422.582333	1264.72517	0.70592	0.00029831	-1.5007	-0.00063419	-0.79483	-0.00033588	422.58159999345827	97.435	2.4101	97.596	96.789	99.199	0.16074					159	55	4	0	0	0	0.86218	1	10097	10097		24.232	3.3947	1	461560			45994	30339	30908	30921	51974	51974					0.1033955510006308
QRREKKFFLLE	11	Unmodified	_QRREKKFFLLE_					0	0	0		ENSG00000141574|ENST00000269389|SECTM1	ENSG00000141574|ENST00000269389|SECTM1	ENSG00000141574|ENST00000269389|SECTM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.6237487792969	3	498.624421	1492.85143	0.89929	0.00044841	-3.5895	-0.0017898	-2.6902	-0.0013414	498.62268617728625	21.451	1.1498	21.519	20.917	22.067	0.068251					65	41	2	0	0	0	0.77511	1	594	594		16.53	2.2866	1	54885			45995	4513	30909	30922	51975	51975					0.12472061605376439
QRREKKFFLLE	11	Unmodified	_QRREKKFFLLE_					0	0	0		ENSG00000141574|ENST00000269389|SECTM1	ENSG00000141574|ENST00000269389|SECTM1	ENSG00000141574|ENST00000269389|SECTM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.62237548828125	3	498.624421	1492.85143	-0.6857	-0.00034191	-2.1348	-0.0010645	-2.8205	-0.0014064	498.62329502123123	21.623	1.0354	21.565	21.112	22.147	-0.057203					74	42	2	0	0	0	0.78683	1	619	619		14.086	0	1	54712			45996	4513	30909	30922	51976	51976					0.12472061605376439
QRREQQWMEKK	11	Unmodified	_QRREQQWMEKK_					0	0	0		ENSG00000169914|ENST00000375120|OTUD3	ENSG00000169914|ENST00000375120|OTUD3	ENSG00000169914|ENST00000375120|OTUD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.26611328125	3	516.268419	1545.78343	0.16514	8.5256E-05	-3.136	-0.001619	-2.9708	-0.0015337	516.2664674460358	64.638	1.1453	65.024	64.607	65.752	0.38614					38	27	2	0	0	0	0.78351	1	6976	6976		14.779	0.085136	1	187700			45997	6540	30910	30923	51977	51977					0.032368686830523075
QRREQQWMEKK	11	Unmodified	_QRREQQWMEKK_					0	0	0		ENSG00000169914|ENST00000375120|OTUD3	ENSG00000169914|ENST00000375120|OTUD3	ENSG00000169914|ENST00000375120|OTUD3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	516.268419	1545.78343	0.2	0.00010325	-3.7716	-0.0019472	-3.5716	-0.0018439	516.2661201514725	64.579	1.0913	65.133	64.685	65.776	0.55386	0.054216	-0.00045217	NaN	14.779	40	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	144300			45998	6540	30910	30923							0.032368686830523075
QRRGEVLAM	9	Unmodified	_QRRGEVLAM_					0	0	0			REV__ENST00000579125.1_1_17:62776100-62776705:-|nuORF	REV__ENST00000579125.1_1_17:62776100-62776705:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2938842773438	2	530.290025	1058.5655	1.6335	0.0008662	4.4379	0.0023534	6.0714	0.0032196	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.72402	1	10676	10676		38.806	2.3594	1	1816400	+		45999	29017	30911	30924	51978	51978					0.03855723551259871
QRRGKVVALEI	11	Unmodified	_QRRGKVVALEI_					0	0	0			REV__nc|ENSG00000165802|Q6X4W1-5|NSMF	REV__nc|ENSG00000165802|Q6X4W1-5|NSMF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	423.5978698730469	3	423.598094	1267.77245	-0.96194	-0.00040747	0.13168	5.5777E-05	-0.83026	-0.0003517	423.59805160624353	105.99	2.401	105.99	105.33	107.73	0					158	55	4	0	0	0	0.7342	1	11063	11063		28.577	6.7963	1	1845700	+		46000	21219	30912	30925	51979	51979					0.14927834371110293
QRRGLDPV	8	Unmodified	_QRRGLDPV_					0	0	0		nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000100731|Q96RV3-3|PCNX1;ENSG00000100731|ENST00000304743|PCNX1;nc|ENSG00000100731|Q96RV3-2|PCNX1;ENST00000554879.5_1_14:71374480-71476401:+|nuORF	nc|ENSG00000100731|Q96RV3-4|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7697448730469	2	470.769783	939.525013	-0.23699	-0.00011157	-1.3396	-0.00063064	-1.5766	-0.00074221	470.7690852138792	80.179	2.0778	80.595	78.892	80.97	0.41621					101	48	4	0	0	0	0.91005	1	9227	9227		42.474	0.078325	1	1333300			46001	1864	30913	30926	51980	51980					0.05283125223149909
QRRILRRVNPK	11	Unmodified	_QRRILRRVNPK_					0	0	0		ENST00000301464.3_1_12:53491832-53494558:+|nuORF;ENST00000548176.1_1_12:53493102-53494558:+|nuORF	ENST00000301464.3_1_12:53491832-53494558:+|nuORF	ENST00000301464.3_1_12:53491832-53494558:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.30853271484375	3	479.307537	1434.90078	0.28128	0.00013482	1.1941	0.00057234	1.4754	0.00070716	479.3079813908047	43.232	1.6002	43.205	42.248	43.848	-0.026764					59	38	2	0	0	0	0.7896	1	3267	3267		13.508	0.55046	1	284320			46002	9805	30914	30927	51981	51981					0.20072814404829842
QRRIRAYN	8	Unmodified	_QRRIRAYN_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.8063354492188	2	538.807231	1075.59991	0.058912	3.1742E-05	-1.0748	-0.0005791	-1.0159	-0.00054736	538.806607108325	90.57	3.5579	90.787	89.308	92.866	0.21737					211	84	4	0	0	0	0.86288	1	8984	8984		26.796	0	1	874780	+		46003	15493	30915	30928	51982	51982					0.06513307754357811
QRRIRAYN	8	Unmodified	_QRRIRAYN_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.806640625	2	538.807231	1075.59991	-1.4886	-0.00080208	0.51859	0.00027942	-0.97003	-0.00052266	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.86288	1	9007	9007		26.796	0.10319	1	783690	+		46004	15493	30915	30928	51983	51983					0.06513307754357811
QRRKLECV	8	Unmodified	_QRRKLECV_					0	0	0			REV__chr21:18738025-18745028|30|41.33|0.0|21.98|-|2|TE_info:L2,L2_dup55381,L2,LINE,donor,+,18745028,18745477|MIR548XHG,None|5	REV__chr21:18738025-18745028|30|41.33|0.0|21.98|-|2|TE_info:L2,L2_dup55381,L2,LINE,donor,+,18745028,18745477|MIR548XHG,None|5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3139038085938	2	516.292568	1030.57058	0.80397	0.00041509	3.2105	0.0016575	4.0144	0.0020726	516.2918879761886	99.081	0.44232	99.238	99.074	99.516	0.15659					23	10	3	0	0	0	0.4196	1	10339	10339		45.952	11.779	1	640920	+		46005	15785	30916	30929	51984	51984					0.05652027413862015
QRRLAAVALIN	11	Unmodified	_QRRLAAVALIN_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.9222106933594	3	408.922689	1223.74624	-0.18603	-7.607E-05	-0.74679	-0.00030538	-0.93282	-0.00038145	408.9223182552884	104.73	3.6152	104.72	103.66	107.27	-0.014809					241	85	5	0	0	0	0.76322	1	11333	11333		17.167	3.6588	1	2991100			46006	4449	30917	30930	51985	51985					0.1433156519960903
QRRLAAVALIN	11	Unmodified	_QRRLAAVALIN_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.8790893554688	2	612.880396	1223.74624	-1.2473	-0.00076447	-0.19726	-0.00012089	-1.4446	-0.00088536	612.8800479877376	104.48	2.784	104.57	103.95	106.73	0.093857					273	68	6	0	0	0	0.6921	1	11001	11001		32.812	3.6629	1	81450000			46007	4449	30917	30930	51986	51986					0.1433156519960903
QRRLGDPV	8	Unmodified	_QRRLGDPV_					0	0	0			REV__ENST00000433688.2_2_11:63531028-63531832:-|nuORF	REV__ENST00000433688.2_2_11:63531028-63531832:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.76922607421875	2	470.769783	939.525013	-0.65478	-0.00030825	-0.88303	-0.00041571	-1.5378	-0.00072396	470.7692226833795	80.078	1.5697	80.605	79.423	80.992	0.52676					81	36	3	0	0	0	0.90465	1	9205	9205		40.573	0	1	1102700	+		46008	26656	30918	30931	51987	51987					0.052831252231385406
QRRLLIIDGK	10	Unmodified	_QRRLLIIDGK_					0	0	0			REV__ENSG00000156463|ENST00000359120|SH3RF2	REV__ENSG00000156463|ENST00000359120|SH3RF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.5888977050781	3	404.59094	1210.75099	-1.3096	-0.00052987	-2.8286	-0.0011444	-4.1383	-0.0016743	404.5896495246431	39.318	1.9056	39.271	38.511	40.416	-0.047005					116	44	4	0	0	0	0.84763	1	2823	2823		17.833	0	1	380940	+		46009	20487	30919	30932	51988	51988					0.15404449342349835
QRRLPILAWL	10	Unmodified	_QRRLPILAWL_					0	0	0		ENSG00000181045|ENST00000361193|SLC26A11	ENSG00000181045|ENST00000361193|SLC26A11	ENSG00000181045|ENST00000361193|SLC26A11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	632.40185546875	2	633.395682	1264.77681	0.21146	0.00013394	-0.091106	-5.7706E-05	0.12035	7.6229E-05	633.3959690708451	16.034	0.15107	16.093	16.017	16.168	0.059269					9	6	2	0	0	0	0.37624	1	102	102		16.473	0	1	41874			46010	7370	30920	30933	51989	51989					0.15501343584674032
QRRPLAVLKTS	11	Unmodified	_QRRPLAVLKTS_					0	0	0		nc|ENSG00000156970|O60566-2|BUB1B;ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B	nc|ENSG00000156970|O60566-2|BUB1B	nc|ENSG00000156970|O60566-2|BUB1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8937377929688	2	634.893503	1267.77245	0.93451	0.00059331	-2.8314	-0.0017976	-1.8969	-0.0012043	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.62614	1	11521	11521		41.427	9.8968	1	69492000			46011	5403	30921	30934	51990	51990					0.1492783437106482
QRRPLQLSPL	10	Unmodified	_QRRPLQLSPL_					0	0	0			REV__ENST00000556658.1_1_15:93609442-93616230:-|nuORF	REV__ENST00000556658.1_1_15:93609442-93616230:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.24676513671875	3	403.247173	1206.71969	0.73411	0.00029603	-1.4803	-0.00059692	-0.74617	-0.00030089	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.86444	1	11183	11183		10.104	0	1	18617000	+		46012	28706	30922	30935	51991	51991					0.12459876308275852
QRRPVAVDVLL	11	Unmodified	_QRRPVAVDVLL_					0	0	0		ENSG00000185897|ENST00000327809|FFAR3	ENSG00000185897|ENST00000327809|FFAR3	ENSG00000185897|ENST00000327809|FFAR3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5924377441406	3	422.594461	1264.76155	-1.7406	-0.00073557	-2.5077	-0.0010597	-4.2483	-0.0017953	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.74771	1	3911	3911		22.562	2.5311	1	1126900			46013	7753	30923	30936	51992	51992					0.13976431996798055
QRRQTLRPLW	10	Unmodified	_QRRQTLRPLW_					0	0	0			REV__ENST00000398808.3_1_11:61038963-61040779:-|nuORF	REV__ENST00000398808.3_1_11:61038963-61040779:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9324035644531	3	451.933588	1352.77894	-1.2127	-0.00054806	-0.85054	-0.00038439	-2.0632	-0.00093245	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.86338	1	10184	10184		31.634	3.0575	1	518100	+		46014	26214	30924	30937	51993	51993					0.11665772322453449
QRRQTLRPLW	10	Unmodified	_QRRQTLRPLW_					0	0	0			REV__ENST00000398808.3_1_11:61038963-61040779:-|nuORF	REV__ENST00000398808.3_1_11:61038963-61040779:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.93310546875	3	451.933588	1352.77894	-1.7713	-0.0008005	-0.19718	-8.9114E-05	-1.9685	-0.00088961	451.93340802352935	100.57	2.3737	100.74	99.884	102.26	0.17199					164	56	4	0	0	0	0.86802	1	10378	10378		27.047	1.9213	1	618930	+		46015	26214	30924	30937	51994	51994					0.11665772322453449
QRRRFREVKLW	11	Unmodified	_QRRRFREVKLW_					0	0	0		chr10:5080901-5096410|19|17.37|0.88|4.3|+|1|AKR1C3,AKR1C3|2	chr10:5080901-5096410|19|17.37|0.88|4.3|+|1|AKR1C3,AKR1C3|2	chr10:5080901-5096410|19|17.37|0.88|4.3|+|1|AKR1C3,AKR1C3|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.31005859375	3	525.311059	1572.91135	2.364	0.0012419	-1.251	-0.00065717	1.113	0.00058468	525.3086540767616	104.83	1.8627	104.98	104.56	106.42	0.15584					154	54	6	0	0	0	0.79716	3	12806	12782;12794;12806		11.932	5.6115	1	420070			46016	74	30925	30938	51995;51996;51997	51997					0.1478079705923392
QRRRFREVKLW	11	Unmodified	_QRRRFREVKLW_					0	0	0		chr10:5080901-5096410|19|17.37|0.88|4.3|+|1|AKR1C3,AKR1C3|2	chr10:5080901-5096410|19|17.37|0.88|4.3|+|1|AKR1C3,AKR1C3|2	chr10:5080901-5096410|19|17.37|0.88|4.3|+|1|AKR1C3,AKR1C3|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.9801025390625	3	525.311059	1572.91135	3.9552	0.0020777	-3.2746	-0.0017202	0.68062	0.00035754	525.3077170758435	104.92	1.8829	105.15	104.51	106.4	0.2268					138	50	5	0	0	0	0.7896	1	12823	12823		13.508	3.404	1	329530			46017	74	30925	30938	51998	51998					0.1478079705923392
QRRRLHRRRRS	11	Unmodified	_QRRRLHRRRRS_					0	0	0		ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.32568359375	3	526.324584	1575.95192	-0.57889	-0.00030468	1.772	0.00093263	1.1931	0.00062795	526.3254470710644	107.82	0.22448	107.82	107.65	107.87	0					18	5	5	0	0	0	0.7896	1	11230	11230		13.508	8.095	1	60798000			46018	9119	30926	30939	51999	51999					0.18698576222254815
QRRRLHRRRRS	11	Unmodified	_QRRRLHRRRRS_					0	0	0		ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3294067382812	3	526.324584	1575.95192	-0.037494	-1.9734E-05	1.442	0.00075894	1.4045	0.00073921	526.3252630893874	108.67	1.0705	108.63	108.13	109.2	-0.044502					60	44	2	0	0	0	0.8498	2	11855	11837;11855		6.001	2.9751	1	1648700			46019	9119	30926	30939	52000;52001	52001					0.18698576222254815
QRRRLHRRRRS	11	Unmodified	_QRRRLHRRRRS_					0	0	0		ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.32275390625	3	526.324584	1575.95192	3.2575	0.0017145	-1.8498	-0.00097362	1.4077	0.00074089	526.658016286229	108.52	1	108.48	108.19	109.19	-0.031494					72	41	2	0	0	0	0.78683	1	12030	12030		14.086	8.6731	1	1360300			46020	9119	30926	30939	52002	52002					0.18698576222254815
QRRRLHRRRRS	11	Unmodified	_QRRRLHRRRRS_					0	0	0		ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.776611328125	3	526.324584	1575.95192	-0.42062	-0.00022138	1.448	0.00076213	1.0274	0.00054075	526.3249589351664	63.133	0.22004	63.161	62.991	63.211	0.028133					16	10	2	0	0	0	0.18258	1	5890	5890		8.7993	4.156	1	119250			46021	9119	30926	30939	52003	52003					0.18698576222254815
QRRRLHRRRRS	11	Unmodified	_QRRRLHRRRRS_					0	0	0		ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	526.324584	1575.95192	-0.57882	-0.00030465	2.3357	0.0012293	1.7569	0.0009247	526.6601140734092	108.37	0.45468	108.37	108.09	108.55	0	-0.15251	0.0025877	NaN	14.086	42	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1323100			46022	9119	30926	30939							0.18698576222254815
QRRRLHRRRRS	11	Unmodified	_QRRRLHRRRRS_					0	0	0		ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	ENST00000215832.10_1_22:22221790-22221904:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	526.324584	1575.95192	-1.5293	-0.00080491	2.8543	0.0015023	1.325	0.0006974	526.325892305452	108.58	0.45205	108.6	108.22	108.67	0.020561	0.077569	0.0034066	NaN	14.086	30	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	691070			46023	9119	30926	30939							0.18698576222254815
QRRRQLRSAP	10	Unmodified	_QRRRQLRSAP_					0	0	0		ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.37646484375	2	634.376343	1266.73813	-0.13776	-8.7389E-05	1.5855	0.0010058	1.4477	0.00091841	634.3771594108364	117.84	0.45279	117.77	117.69	118.15	-0.07531					44	17	3	0	0	0	0.85466	1	12641	12641		20.947	2.6848	1	1053300			46024	4261	30927	30940	52004	52004					0.11543431002837679
QRRRQLRSAP	10	Unmodified	_QRRRQLRSAP_					0	0	0		ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3767700195312	2	634.376343	1266.73813	-1.1773	-0.00074688	2.1529	0.0013658	0.97558	0.00061888	634.3774291341157	112.05	1.1748	112.03	111.8	112.98	-0.019882					84	36	4	0	0	0	0.85934	1	12031	12031		35.618	2.8059	1	22589000			46025	4261	30927	30940	52005	52005					0.11543431002837679
QRRRRKLRRPT	11	Unmodified	_QRRRRKLRRPT_					0	0	0			REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.3188171386719	3	508.325702	1521.95528	0.089543	4.5517E-05	-1.0694	-0.00054362	-0.9799	-0.00049811	508.32492638312266	16.548	0.77167	16.607	16.438	17.209	0.059269					81	31	4	0	0	0	0.89215	1	158	158		3.2113	0	1	510050	+		46026	25012	30928	30941	52006	52006					0.21517826276249252
QRRSCVHDI	9	Unmodified	_QRRSCVHDI_					0	0	0			REV__nc|ENSG00000162923|Q9H7D7-2|WDR26	REV__nc|ENSG00000162923|Q9H7D7-2|WDR26	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	557.2813720703125	2	557.282731	1112.55091	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.9	1	70.976	70.476	71.476	0.076225								0	0	0	0.30613	1	6420	6420		42.396	9.5837	1		+		46027	20862	30929	30942	52007	52007					-0.0008634859689209406
QRRSKPGKRR	10	Unmodified	_QRRSKPGKRR_					0	0	0		ENST00000573745.1_1_17:7165530-7166136:-|nuORF	ENST00000573745.1_1_17:7165530-7166136:-|nuORF	ENST00000573745.1_1_17:7165530-7166136:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	423.5976867675781	3	423.597199	1267.76977	-0.18424	-7.8043E-05	1.3096	0.00055476	1.1254	0.00047672	423.5976787176537	105.93	2.5264	105.91	105.23	107.75	-0.025146					222	59	5	0	0	0	0.8651	1	11423	11423		24.232	0	1	5735600			46028	14025	30930	30943	52008	52008					0.14659423756779688
QRRSRRLHWFP	11	Unmodified	_QRRSRRLHWFP_					0	0	0			REV__ENST00000546949.5_1_19:58514261-58515786:+|nuORF	REV__ENST00000546949.5_1_19:58514261-58515786:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.6229248046875	3	513.623637	1537.84908	-1.3126	-0.00067417	-2.1949	-0.0011273	-3.5075	-0.0018015	513.6224723967395	41.448	0.4704	42.082	41.884	42.354	0.6339					39	12	4	0	0	0	0.73647	1	3646	3646		25.068	4.0355	1	2897000	+		46029	28541	30931	30944	52009	52009					0.10167070710917869
QRRTFLKKYN	10	Unmodified	_QRRTFLKKYN_					0	0	0		ENST00000341976.4_2_22:24087343-24092930:-|nuORF	ENST00000341976.4_2_22:24087343-24092930:-|nuORF	ENST00000341976.4_2_22:24087343-24092930:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.266845703125	3	451.929844	1352.7677	2.1819	0.00098608	4.1274	0.0018653	6.3093	0.0028514	451.9316131706083	100.36	1.9025	100.71	99.62	101.52	0.3459					138	47	4	0	0	0	0.8573	1	12298	12298		16.007	2.4988	1	885260			46030	10254	30932	30945	52010	52010					0.10542950228341397
QRRTLHAIF	9	Unmodified	_QRRTLHAIF_					0	0	0		ENSG00000169856|ENST00000305901|ONECUT1	ENSG00000169856|ENST00000305901|ONECUT1	ENSG00000169856|ENST00000305901|ONECUT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.330810546875	2	571.333082	1140.65161	-1.3827	-0.00078998	-2.3234	-0.0013274	-3.7061	-0.0021174	571.3317717910289	102.19	3.5699	102.32	101.59	105.16	0.1357					156	88	4	0	0	0	0.78536	1	10682	10682		29.15	2.1022	1	3715400			46031	6530	30933	30946	52011	52011					0.08691051448272447
QRRTPQGIGLL	11	Unmodified	_QRRTPQGIGLL_					0	0	0		ENSG00000184156|ENST00000388996|KCNQ3	ENSG00000184156|ENST00000388996|KCNQ3	ENSG00000184156|ENST00000388996|KCNQ3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8696899414062	2	619.870028	1237.7255	0.87762	0.00054401	-1.8204	-0.0011284	-0.94278	-0.0005844	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.69995	1	9979	9979		31.53	0	1	6574700			46032	7582	30934	30947	52012	52012					0.11614974819940471
QRRVRGSEY	9	Unmodified	_QRRVRGSEY_					0	0	0		ENSG00000065833|ENST00000369705|ME1;nc|ENSG00000065833|P48163-2|ME1	ENSG00000065833|ENST00000369705|ME1	ENSG00000065833|ENST00000369705|ME1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8090209960938	2	575.807428	1149.6003	-0.72954	-0.00042008	2.9636	0.0017065	2.2341	0.0012864	575.8091320270833	37.446	0.75306	37.394	37.05	37.803	-0.052689					39	16	4	0	0	0	0.35373	1	2563	2563		60.972	2.19	1	242790			46033	1142	30935	30948	52013	52013					0.03148682683581683
QRRVRPALP	9	Unmodified	_QRRVRPALP_					0	0	0		ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8399047851562	2	546.841074	1091.66759	-0.49529	-0.00027085	-1.5303	-0.00083683	-2.0256	-0.0011077	546.8402497724348	101.28	3.7061	101.28	100.69	104.39	0					228	91	5	0	0	0	0.58151	1	10287	10287		47.916	3.7988	1	22090000			46034	13595	30936	30949	52014	52014					0.12542757685173456
QRRVRPALP	9	Unmodified	_QRRVRPALP_					0	0	0		ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8401489257812	2	546.841074	1091.66759	-0.41161	-0.00022509	-2.2056	-0.0012061	-2.6172	-0.0014312	546.8400747085221	101.16	3.89	101.19	100.52	104.41	0.031036					283	93	6	0	0	0	0.76996	3	10767	10767;10863;11049		33.516	3.0119	1	40007000			46035	13595	30936	30949	52015;52016;52017	52015					0.12542757685173456
QRRVRPALP	9	Unmodified	_QRRVRPALP_					0	0	0		ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8402709960938	2	546.841074	1091.66759	1.265	0.00069175	-3.5971	-0.001967	-2.3321	-0.0012753	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.77546	1	10960	10960		31.955	2.8053	1	39577000			46036	13595	30936	30949	52018	52018					0.12542757685173456
QRRVRPALP	9	Unmodified	_QRRVRPALP_					0	0	0		ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.84130859375	2	546.841074	1091.66759	0.19665	0.00010754	-2.8678	-0.0015682	-2.6712	-0.0014607	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.69914	5	10481	10481;10621;10632;10680;10693		40.573	10.069	1	55511000			46037	13595	30936	30949	52019;52020;52021;52022;52023	52019					0.12542757685173456
QRRVRPALP	9	Unmodified	_QRRVRPALP_					0	0	0		ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8399658203125	2	546.841074	1091.66759	0.84844	0.00046396	-3.1925	-0.0017458	-2.3441	-0.0012818	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.76996	3	10542	10542;10672;10850		33.516	3.0119	1	43597000			46038	13595	30936	30949	52024;52025;52026	52024					0.12542757685173456
QRRVRPALP	9	Unmodified	_QRRVRPALP_					0	0	0		ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8406372070312	2	546.841074	1091.66759	-1.4624	-0.00079971	-0.92504	-0.00050585	-2.3875	-0.0013056	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.7932	1	10442	10442		26.796	2.5934	1	44929000			46039	13595	30936	30949	52027	52027					0.12542757685173456
QRRVRPALP	9	Unmodified	_QRRVRPALP_					0	0	0		ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8409423828125	2	546.841074	1091.66759	0.96702	0.0005288	-2.8806	-0.0015752	-1.9136	-0.0010464	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.76996	2	12226	12214;12226		33.516	1.2474	1	9124000			46040	13595	30936	30949	52028;52029	52029					0.12542757685173456
QRRVRPALP	9	Unmodified	_QRRVRPALP_					0	0	0		ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	ENST00000546828.6_1_12:98909466-98909845:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.8404541015625	2	546.841074	1091.66759	2.1573	0.0011797	-3.9764	-0.0021745	-1.8191	-0.00099474	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.67235	1	12283	12283		42.474	0.078325	1	10074000			46041	13595	30936	30949	52030	52030					0.12542757685173456
QRRWEDLK	8	Unmodified	_QRRWEDLK_					0	0	0		ENSG00000102452|ENST00000251127|NALCN	ENSG00000102452|ENST00000251127|NALCN	ENSG00000102452|ENST00000251127|NALCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.30322265625	2	565.806897	1129.59924	-0.5712	-0.00032319	-4.4912	-0.0025411	-5.0624	-0.0028643	565.8039818963895	61.203	0.44581	61.592	61.467	61.912	0.38945					20	13	2	0	0	0	0.60357	1	6516	6516		71.296	7.0884	1	233140			46042	2005	30937	30950	52031	52031					0.03962468314648504
QRSETVTLYIT	11	Unmodified	_QRSETVTLYIT_					0	0	0		ENSG00000143297|ENST00000361835|FCRL5;ENST00000461387.5_1_1:157490334-157491110:-|nuORF	ENSG00000143297|ENST00000361835|FCRL5	ENSG00000143297|ENST00000361835|FCRL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.56982421875	3	437.56987	1309.68778	-0.6351	-0.0002779	0.98116	0.00042933	0.34607	0.00015143	437.9045428950401	34.711	0.64537	34.655	34.401	35.047	-0.056385					31	14	3	0	0	0	0.74405	1	2208	2208		23.378	2.3457	1	113570			46043	4614	30938	30951	52032	52032					0.04532419043835034
QRSHINQY	8	Unmodified	_QRSHINQY_					0	0	0			REV__ENST00000252713.8_3_7:99171757-99171883:+|nuORF	REV__ENST00000252713.8_3_7:99171757-99171883:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.7614135742188	2	523.262322	1044.51009	-0.58611	-0.00030669	-3.5403	-0.0018525	-4.1264	-0.0021592	523.7610662863972	60.377	0.92597	60.408	60.027	60.953	0.0312					81	26	4	0	0	0	0.90465	1	5620	5620		40.573	7.7602	1	376950	+		46044	24296	30939	30952	52033	52033					-0.010383666448660733
QRSIKGPKSS	10	Unmodified	_QRSIKGPKSS_					0	0	0			REV__nc|ENSG00000035928|P35251|RFC1	REV__nc|ENSG00000035928|P35251|RFC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.3146362304688	2	544.314554	1086.61456	0.087837	4.7811E-05	-0.96518	-0.00052536	-0.87735	-0.00047755	544.3139175848067	41.643	0.57133	41.612	41.338	41.909	-0.030991					26	13	3	0	0	0	0.78666	1	3044	3044		40.058	4.4399	1	230620	+		46045	16290	30940	30953	52034	52034					0.07471335111858934
QRSIKGPKSS	10	Unmodified	_QRSIKGPKSS_					0	0	0			REV__nc|ENSG00000035928|P35251|RFC1	REV__nc|ENSG00000035928|P35251|RFC1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	544.314554	1086.61456	-0.61685	-0.00033576	-0.81801	-0.00044526	-1.4349	-0.00078102	544.313993071633	41.604	0.41374	41.608	41.378	41.792	0.0034142	0.013198	1.7851E-05	NaN	40.058	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	271820	+		46046	16290	30940	30953							0.07471335111858934
QRSIKRAKHR	10	Unmodified	_QRSIKRAKHR_					0	0	0			REV__ENST00000437626.5_1_21:46548444-46591585:+|nuORF	REV__ENST00000437626.5_1_21:46548444-46591585:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.395263671875	2	640.394536	1278.77452	0.58213	0.0003728	-2.871	-0.0018386	-2.2888	-0.0014658	640.3927395119395	53.856	0.94003	53.879	53.327	54.267	0.022541					50	25	3	0	0	0	0.86348	1	4760	4760		31.53	8.0071	1	220800	+		46047	26710	30941	30954	52035	52035					0.14628307899556603
QRSPAQPLFS	10	Unmodified	_QRSPAQPLFS_					0	0	0			REV__ENSG00000123388|ENST00000546378|HOXC11	REV__ENSG00000123388|ENST00000546378|HOXC11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.8029174804688	2	565.80128	1129.58801	0.42998	0.00024328	3.1167	0.0017634	3.5467	0.0020067	565.8029659982216	55.729	1.1064	56.13	55.323	56.429	0.40101					58	26	4	0	0	0	0.42393	2	5717	5707;5717		62.107	1.9892	1	2562400	+		46048	18542	30942	30955	52036;52037	52037					0.02839646220513714
QRSSIGKVN	9	Unmodified	_QRSSIGKVN_					0	0	0		ENST00000563419.5_1_16:66858748-66864862:-|nuORF	ENST00000563419.5_1_16:66858748-66864862:-|nuORF	ENST00000563419.5_1_16:66858748-66864862:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.780029296875	2	494.780348	987.546142	-0.85772	-0.00042438	0.93735	0.00046378	0.07963	3.9399E-05	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.78536	1	8731	8731		29.15	0	1	737700			46049	13870	30943	30956	52038	52038					0.05187090532012917
QRSTIVKNS	9	Unmodified	_QRSTIVKNS_					0	0	0		ENSG00000183186|ENST00000332235|C2CD4C	ENSG00000183186|ENST00000332235|C2CD4C	ENSG00000183186|ENST00000332235|C2CD4C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7933959960938	2	516.793455	1031.57236	0.82179	0.0004247	-0.75095	-0.00038809	0.070838	3.6609E-05	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.6204	1	9129	9129		45.972	9.5255	1	858640			46050	7507	30944	30957	52039	52039					0.057833597034687045
QRSVERLRREL	11	Unmodified	_QRSVERLRREL_					0	0	0			REV__ENST00000470974.1_1_2:85922010-85922247:+|nuORF	REV__ENST00000470974.1_1_2:85922010-85922247:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2822570800781	3	481.283057	1440.82734	-0.57529	-0.00027688	0.63408	0.00030517	0.058786	2.8293E-05	481.28331893775436	101.47	1.933	101.51	100.25	102.18	0.044815					108	45	4	0	0	0	0.76892	1	10939	10939		17.833	0	1	479720	+		46051	27223	30945	30958	52040	52040					0.1245622117169205
QRSVERLRREL	11	Unmodified	_QRSVERLRREL_					0	0	0			REV__ENST00000470974.1_1_2:85922010-85922247:+|nuORF	REV__ENST00000470974.1_1_2:85922010-85922247:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.2824401855469	3	481.283057	1440.82734	0.78447	0.00037755	-0.63085	-0.00030362	0.15362	7.3933E-05	481.2826753418143	101.45	1.7107	101.6	100.6	102.31	0.14352					107	41	3	0	0	0	0.74771	1	10687	10687		22.562	0.78116	1	602290	+		46052	27223	30945	30958	52041	52041					0.1245622117169205
QRTEVVKKHI	10	Unmodified	_QRTEVVKKHI_					0	0	0		nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1;ENSG00000198901|ENST00000394249|PRC1;chr15:90982026-90984018|51|10.22|0.42|4.59|-|ENST00000559811|PRC1,PRC1;ENST00000555791.5_1_15:91527220-91537794:-|nuORF;ENST00000557763.5_1_15:91524929-91537713:-|nuORF	nc|ENSG00000198901|O43663-3|PRC1	nc|ENSG00000198901|O43663-3|PRC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.3773193359375	2	619.372404	1236.73025	2.9405	0.0018212	-2.9614	-0.0018342	-0.020906	-1.2949E-05	619.3710459342678	101.7	2.0362	101.65	101.12	103.16	-0.049828					124	48	5	0	0	0	0.8651	1	11161	11161		25.574	1.0549	1	3045300			46053	8364	30946	30959	52042	52042					0.121358589627107
QRTFRRRRRLF	11	Unmodified	_QRTFRRRRRLF_					0	0	0			REV__ENSG00000179772|ENST00000375978|FOXS1	REV__ENSG00000179772|ENST00000375978|FOXS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.6558837890625	3	531.322069	1590.94438	3.7026	0.0019673	-4.1415	-0.0022005	-0.43884	-0.00023316	531.3187831183677	104.84	0.57112	105.07	104.8	105.37	0.2268					24	13	3	0	0	0	0.93527	1	12815	12815		0.37141	0.059155	1	204050	+		46054	22352	30947	30960	52043	52043					0.17254423901954397
QRTRLLDS	8	Unmodified	_QRTRLLDS_					0	0	0		ENST00000529500.1_1_11:47447261-47447800:-|nuORF;ENST00000528362.1_1_11:47446139-47447800:-|nuORF;ENST00000531653.5_1_11:47445967-47447800:-|nuORF;ENSG00000165916|ENST00000298852|PSMC3	ENST00000529500.1_1_11:47447261-47447800:-|nuORF	ENST00000529500.1_1_11:47447261-47447800:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.77984619140625	2	494.780348	987.546142	-0.60063	-0.00029718	0.65872	0.00032592	0.05809	2.8742E-05	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.91977	1	8581	8581		45.952	8.7928	1	707910			46055	6136	30948	30961	52044	52044					0.051870905319901794
QRTSPTPKT	9	Unmodified	_QRTSPTPKT_					0	0	0			REV__ENST00000333651.10_1_19:3578565-3578892:+|nuORF	REV__ENST00000333651.10_1_19:3578565-3578892:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2798767089844	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.6204	1	9294	9294		45.972	0	1	1903500	+		46056	25148	30949	30962	52045	52045					0.03911670812135526
QRTTPLILQE	10	Unmodified	_QRTTPLILQE_					0	0	0		ENSG00000157399|ENST00000381134|ARSL	ENSG00000157399|ENST00000381134|ARSL	ENSG00000157399|ENST00000381134|ARSL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2296447753906	3	400.231189	1197.67174	-0.34643	-0.00013865	-1.8381	-0.00073567	-2.1845	-0.00087432	400.2304278989063	42.279	0.60004	42.693	42.427	43.027	0.4139					28	14	3	0	0	0	0.86446	1	3748	3748		30.569	2.9249	1	989290			46057	5427	30950	30963	52046	52046					0.08080757597554111
QRVACIIPL	9	Unmodified	_QRVACIIPL_					0	0	0		chr1:172140596-172144365|61|16.49|0.01|10.47|-|0|DNM3OS,DNM3OS|1	chr1:172140596-172144365|61|16.49|0.01|10.47|-|0|DNM3OS,DNM3OS|1	chr1:172140596-172144365|61|16.49|0.01|10.47|-|0|DNM3OS,DNM3OS|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8009033203125	2	506.802237	1011.58992	0.2762	0.00013998	-2.9987	-0.0015198	-2.7225	-0.0013798	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.7932	1	3641	3641		25.45	1.2474	1	416790			46058	28	30951	30964	52047	52047					0.08458983704770162
QRVACIIPL	9	Unmodified	_QRVACIIPL_					0	0	0		chr1:172140596-172144365|61|16.49|0.01|10.47|-|0|DNM3OS,DNM3OS|1	chr1:172140596-172144365|61|16.49|0.01|10.47|-|0|DNM3OS,DNM3OS|1	chr1:172140596-172144365|61|16.49|0.01|10.47|-|0|DNM3OS,DNM3OS|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.79962158203125	2	506.802237	1011.58992	-1.1816	-0.00059884	-1.852	-0.00093859	-3.0336	-0.0015374	506.8012726682809	44.534	3.0875	44.53	42.489	45.577	-0.0041618					139	73	2	0	0	0	0.76996	1	3473	3473		33.516	1.5607	1	459990			46059	28	30951	30964	52048	52048					0.08458983704770162
QRVAGVGR	8	Unmodified	_QRVAGVGR_					0	0	0			REV__ENST00000545022.5_1_12:121970787-121972525:-|nuORF	REV__ENST00000545022.5_1_12:121970787-121972525:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7514953613281	2	421.751393	841.488233	-0.10002	-4.2183E-05	0.32598	0.00013748	0.22596	9.5298E-05	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.85277	1	7735	7735		25.45	3.7478	1	579450	+		46060	28518	30952	30965	52049	52049					0.06114873397245901
QRVALICLP	9	Unmodified	_QRVALICLP_					0	0	0		nc|ENSG00000186715|Q2TV78-2|MST1L;nc|ENSG00000186715|Q2TV78|MST1L;ENST00000492329.5_1_3:49721463-49723185:-|nuORF;nc|ENSG00000173531|P26927|MST1;ENSG00000173531|ENST00000449682|MST1	nc|ENSG00000186715|Q2TV78-2|MST1L	nc|ENSG00000186715|Q2TV78-2|MST1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.80206298828125	2	506.802237	1011.58992	-0.048814	-2.4739E-05	-2.3669	-0.0011995	-2.4157	-0.0012243	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.7932	1	3246	3246		25.45	0	1	475290			46061	15162	30953	30966	52050	52050					0.08458983704770162
QRVLEHRRRNQ	11	Unmodified	_QRVLEHRRRNQ_					0	0	0		nc|ENSG00000168309|O95990-2|FAM107A;ENSG00000168309|ENST00000360997|FAM107A;nc|ENSG00000168309|O95990-3|FAM107A;nc|ENSG00000168309|O95990-4|FAM107A	nc|ENSG00000168309|O95990-2|FAM107A	nc|ENSG00000168309|O95990-2|FAM107A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.9508056640625	3	497.950301	1490.82907	1.9027	0.00094744	-0.38779	-0.0001931	1.5149	0.00075435	497.9500785966066	24.766	1.0222	24.252	23.746	24.768	-0.51365					66	22	5	0	0	0	0.74405	1	1215	1215		23.378	0	1	639230			46062	6392	30954	30967	52051	52051					0.1032927498031313
QRVLLILG	8	Unmodified	_QRVLLILG_					0	0	0		nc|ENSG00000153982|Q8N9F7-3|GDPD1;nc|ENSG00000153982|Q8N9F7-2|GDPD1;ENSG00000153982|ENST00000284116|GDPD1	nc|ENSG00000153982|Q8N9F7-3|GDPD1	nc|ENSG00000153982|Q8N9F7-3|GDPD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3033447265625	2	456.30547	910.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.038	1	21.979	21.479	22.479	-0.05867								0	0	0	0.30004	1	686	686		21.702	2.3424	1				46063	5250	30955	30968	52052	52052					0.13751244927811968
QRVLYAIY	8	Unmodified	_QRVLYAIY_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.729248046875	2	513.292559	1024.57057	0.49124	0.00025215	-0.36516	-0.00018743	0.12608	6.4717E-05	513.2921400867955	64.169	0.75687	64.723	64.386	65.143	0.55386					28	17	2	0	0	0	0.4196	1	6984	6984		14.664	0	1	108960	+		46064	20903	30956	30969	52053	52053					0.05926350685513171
QRVLYAIY	8	Unmodified	_QRVLYAIY_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	513.292559	1024.57057	-0.066202	-3.3981E-05	0.07655	3.9293E-05	0.010348	5.3115E-06	513.2922622058015	64.243	0.63841	64.63	64.396	65.034	0.3868	-0.046862	0.00019305	NaN	14.664	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121760	+		46065	20903	30956	30969							0.05926350685513171
QRVPPGFLL	9	Unmodified	_QRVPPGFLL_					0	0	0		chr20:63446837-63466626|45|29.69|0.42|6.15|-|0|KCNQ2,KCNQ2|1	chr20:63446837-63466626|45|29.69|0.42|6.15|-|0|KCNQ2,KCNQ2|1	chr20:63446837-63466626|45|29.69|0.42|6.15|-|0|KCNQ2,KCNQ2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8091430664062	2	513.808377	1025.6022	-0.12671	-6.5103E-05	1.3179	0.00067714	1.1912	0.00061204	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.76996	1	3948	3948		33.516	1.5607	1	1731500			46066	370	30957	30970	52054	52054					0.09042343439477918
QRVPPGFLL	9	Unmodified	_QRVPPGFLL_					0	0	0		chr20:63446837-63466626|45|29.69|0.42|6.15|-|0|KCNQ2,KCNQ2|1	chr20:63446837-63466626|45|29.69|0.42|6.15|-|0|KCNQ2,KCNQ2|1	chr20:63446837-63466626|45|29.69|0.42|6.15|-|0|KCNQ2,KCNQ2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8086547851562	2	513.808377	1025.6022	0.36714	0.00018864	1.0087	0.00051826	1.3758	0.0007069	513.8088609518841	50.93	1.0953	50.98	50.541	51.637	0.049896					79	32	3	0	0	0	0.7932	1	4068	4068		19.36	1.995	1	394250			46067	370	30957	30970	52055	52055					0.09042343439477918
QRVQLLSTD	9	Unmodified	_QRVQLLSTD_					0	0	0			REV__nc|ENSG00000204469|P48634-2|PRRC2A	REV__nc|ENSG00000204469|P48634-2|PRRC2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2935180664062	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.7932	1	8998	8998		26.693	1.1189	1	1390700	+		46068	23495	30958	30971	52056	52056					0.04507939983614051
QRVQRRLERL	10	Unmodified	_QRVQRRLERL_					0	0	0			REV__nc|ENSG00000095066|Q96ED9-2|HOOK2	REV__nc|ENSG00000095066|Q96ED9-2|HOOK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9430236816406	3	451.944376	1352.8113	-1.2962	-0.0005858	-1.4594	-0.00065959	-2.7556	-0.0012454	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.85259	1	4288	4288		20.03	0.7678	1	734340	+		46069	17052	30959	30972	52057	52057					0.14900559725447238
QRVQRRLERL	10	Unmodified	_QRVQRRLERL_					0	0	0			REV__nc|ENSG00000095066|Q96ED9-2|HOOK2	REV__nc|ENSG00000095066|Q96ED9-2|HOOK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9427795410156	3	451.944376	1352.8113	0.3266	0.00014761	-3.1108	-0.0014059	-2.7842	-0.0012583	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.84763	1	4245	4245		17.833	0.6664	1	721610	+		46070	17052	30959	30972	52058	52058					0.14900559725447238
QRVQRRLERL	10	Unmodified	_QRVQRRLERL_					0	0	0			REV__nc|ENSG00000095066|Q96ED9-2|HOOK2	REV__nc|ENSG00000095066|Q96ED9-2|HOOK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9442138671875	3	451.944376	1352.8113	-0.61036	-0.00027585	-1.697	-0.00076695	-2.3073	-0.0010428	451.94349825987973	55.257	1.4276	55.22	54.668	56.095	-0.036823					123	46	4	0	0	0	0.86647	1	4575	4575		28.577	0.93281	1	459960	+		46071	17052	30959	30972	52059	52059					0.14900559725447238
QRVRSNQLF	9	Unmodified	_QRVRSNQLF_					0	0	0			REV__ENSG00000142655|ENST00000356607|PEX14	REV__ENSG00000142655|ENST00000356607|PEX14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3195190429688	2	574.320171	1146.62579	-1.3729	-0.0007885	0.18056	0.0001037	-1.1924	-0.0006848	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.74721	1	9539	9539		37.159	2.0071	1	1586900	+		46072	19750	30960	30973	52060	52060					0.058341572059816826
QRWTEECMWPQ	11	Unmodified	_QRWTEECMWPQ_					0	0	0		ENST00000476968.5_1_1:32560475-32568271:+|nuORF	ENST00000476968.5_1_1:32560475-32568271:+|nuORF	ENST00000476968.5_1_1:32560475-32568271:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.28240966796875	3	498.548195	1492.62275	-1.3979	-0.00069691	-3.8996	-0.0019441	-5.2974	-0.002641	498.54633364997545	29.405	0.47697	29.376	29.127	29.604	-0.029207					15	10	2	0	0	0	0.17955	1	1822	1822		23.378	6.8481	1	119900			46073	12349	30961	30974	52061	52061					-0.10385222025342955
QRWYRHQVQRR	11	Unmodified	_QRWYRHQVQRR_					0	0	0		nc|ENSG00000141577|Q9UPN4-3|CEP131;ENSG00000141577|ENST00000450824|CEP131;nc|ENSG00000141577|Q9UPN4|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.6272583007812	3	538.294179	1611.86071	-0.15689	-8.4455E-05	-1.9352	-0.0010417	-2.0921	-0.0011261	538.2930494824271	59.552	0.7397	59.538	59.196	59.935	-0.013729					62	19	5	0	0	0	0.81021	2	5490	5455;5490		9.2118	6.0005	1	520410			46074	4515	30962	30975	52062;52063	52063					0.07925267734231056
QRWYRHQVQRR	11	Unmodified	_QRWYRHQVQRR_					0	0	0		nc|ENSG00000141577|Q9UPN4-3|CEP131;ENSG00000141577|ENST00000450824|CEP131;nc|ENSG00000141577|Q9UPN4|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.292724609375	3	538.294179	1611.86071	0.8827	0.00047515	-2.9495	-0.0015877	-2.0668	-0.0011125	538.2925277299113	59.452	0.73342	59.42	59.111	59.844	-0.031685					54	17	4	0	0	0	0.80813	2	5559	5559;5594		9.6461	0.43434	1	673760			46075	4515	30962	30975	52064;52065	52064					0.07925267734231056
QRWYRHQVQRR	11	Unmodified	_QRWYRHQVQRR_					0	0	0		nc|ENSG00000141577|Q9UPN4-3|CEP131;ENSG00000141577|ENST00000450824|CEP131;nc|ENSG00000141577|Q9UPN4|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	538.294179	1611.86071	-1.1531	-0.00062072	-0.73065	-0.0003933	-1.8838	-0.001014	538.2937473939149	59.471	0.42462	59.471	59.286	59.711	0	0.029889	0.0021893	NaN	9.6461	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85372			46076	4515	30962	30975							0.07925267734231056
QRWYRHQVQRR	11	Unmodified	_QRWYRHQVQRR_					0	0	0		nc|ENSG00000141577|Q9UPN4-3|CEP131;ENSG00000141577|ENST00000450824|CEP131;nc|ENSG00000141577|Q9UPN4|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	538.294179	1611.86071	-0.0059806	-3.2193E-06	-1.883	-0.0010136	-1.889	-0.0010168	538.6275387260222	59.29	0.41835	59.384	59.221	59.639	0.094059	-0.057067	0.00032837	NaN	9.6461	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107290			46077	4515	30962	30975							0.07925267734231056
QRWYRHQVQRR	11	Unmodified	_QRWYRHQVQRR_					0	0	0		nc|ENSG00000141577|Q9UPN4-3|CEP131;ENSG00000141577|ENST00000450824|CEP131;nc|ENSG00000141577|Q9UPN4|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	538.294179	1611.86071	0.46606	0.00025088	-2.5845	-0.0013912	-2.1184	-0.0011403	538.292834196264	59.309	0.46161	59.423	59.183	59.645	0.11396	-0.018454	-0.00080442	NaN	9.6461	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135350			46078	4515	30962	30975							0.07925267734231056
QRWYRHQVQRR	11	Unmodified	_QRWYRHQVQRR_					0	0	0		nc|ENSG00000141577|Q9UPN4-3|CEP131;ENSG00000141577|ENST00000450824|CEP131;nc|ENSG00000141577|Q9UPN4|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	538.294179	1611.86071	-0.47618	-0.00025633	-1.2528	-0.00067438	-1.729	-0.00093071	538.2932218539654	59.482	0.52486	59.483	59.171	59.696	0.00051117	0.042028	0.001346	NaN	9.6461	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128190			46079	4515	30962	30975							0.07925267734231056
QRYMQLKRK	9	Unmodified	_QRYMQLKRK_					0	0	0			REV__ENST00000592676.1_1_17:74731222-74731732:-|nuORF	REV__ENST00000592676.1_1_17:74731222-74731732:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.5755920410156	3	417.576525	1249.70774	1.3349	0.00055741	-3.7322	-0.0015585	-2.3974	-0.0010011	417.5749239051732	21.566	1.4264	21.123	20.825	22.251	-0.44324					86	32	4	0	0	0	0.78528	1	811	811		29.17	0.59333	1	1107100	+		46080	29217	30963	30976	52066	52066					0.0928793629343545
QRYTCASVVI	10	Unmodified	_QRYTCASVVI_					0	0	0			REV__ENSG00000161652|ENST00000293405|IZUMO2	REV__ENSG00000161652|ENST00000293405|IZUMO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.2930908203125	2	570.297516	1138.58048	0.52087	0.00029705	-4.2084	-0.0024	-3.6875	-0.002103	570.2950227593519	61.904	0.63083	62.025	61.702	62.333	0.1209					52	26	3	0	0	0	0.51302	1	5386	5386		54.776	3.5836	1	523140	+		46081	20774	30964	30977	52067	52067					0.016731706286009285
QRYVKNMDIL	10	Unmodified	_QRYVKNMDIL_					0	0	0			REV__nc|ENSG00000178209|Q15149-7|PLEC	REV__nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3457641601562	2	640.344997	1278.67544	0.023456	1.502E-05	2.8832	0.0018462	2.9066	0.0018613	640.3467925312829	103.68	0.57704	103.68	103.38	103.96	0					38	13	4	0	0	0	0.80179	1	10620	10620		39.253	6.4404	1	848260	+		46082	22265	30965	30978	52068	52068					0.04725104099793498
QRYVKNMDIL	10	Unmodified	_QRYVKNMDIL_					0	0	0			REV__nc|ENSG00000178209|Q15149-7|PLEC	REV__nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3463745117188	2	640.344997	1278.67544	1.7833	0.0011419	0.56802	0.00036373	2.3513	0.0015056	640.3453874628556	103.41	0.76866	103.63	103.42	104.19	0.22556					52	18	4	0	0	0	0.77314	1	12569	12569		40.778	3.6191	1	7100500	+		46083	22265	30965	30978	52069	52069					0.04725104099793498
QSAKLKSTLTT	11	Unmodified	_QSAKLKSTLTT_					0	0	0			REV__nc|ENSG00000090615|Q08378-4|GOLGA3	REV__nc|ENSG00000090615|Q08378-4|GOLGA3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3434448242188	2	589.342978	1176.6714	-0.36759	-0.00021664	0.33052	0.00019479	-0.037071	-2.1847E-05	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.74763	1	9573	9573		22.58	1.6327	1	11103000	+		46084	16993	30966	30979	52070	52070					0.09013337877695449
QSAKLKSTLTT	11	Unmodified	_QSAKLKSTLTT_					0	0	0			REV__nc|ENSG00000090615|Q08378-4|GOLGA3	REV__nc|ENSG00000090615|Q08378-4|GOLGA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3423461914062	2	589.342978	1176.6714	-0.65315	-0.00038493	0.25103	0.00014794	-0.40212	-0.00023699	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.732	1	9648	9648		26.063	0.48933	1	5584100	+		46085	16993	30966	30979	52071	52071					0.09013337877695449
QSAKLKSTLTT	11	Unmodified	_QSAKLKSTLTT_					0	0	0			REV__nc|ENSG00000090615|Q08378-4|GOLGA3	REV__nc|ENSG00000090615|Q08378-4|GOLGA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427734375	2	589.342978	1176.6714	0.81285	0.00047905	-1.2472	-0.00073503	-0.43435	-0.00025598	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.67762	1	9189	9189		35.178	2.3658	1	6450100	+		46086	16993	30966	30979	52072	52072					0.09013337877695449
QSAKLKSTLTT	11	Unmodified	_QSAKLKSTLTT_					0	0	0			REV__nc|ENSG00000090615|Q08378-4|GOLGA3	REV__nc|ENSG00000090615|Q08378-4|GOLGA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3429565429688	2	589.342978	1176.6714	0.82336	0.00048524	-0.86988	-0.00051266	-0.046516	-2.7414E-05	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.67778	1	11284	11284		35.152	0.97948	1	9460500	+		46087	16993	30966	30979	52073	52073					0.09013337877695449
QSAQHRGEH	9	Unmodified	_QSAQHRGEH_					0	0	0			REV__chr20:32762699-32780318|54|20.96|0.74|4.83|+|2|DNMT3B,DNMT3B|1	REV__chr20:32762699-32780318|54|20.96|0.74|4.83|+|2|DNMT3B,DNMT3B|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.24609375	2	525.247203	1048.47985	0.85111	0.00044704	1.6218	0.00085185	2.4729	0.0012989	525.2479309242038	26.545	0.78844	26.516	26.103	26.891	-0.029093					41	16	3	0	0	0	0.78983	1	1101	1101		27.882	1.0861	1	239470	+		46088	15771	30967	30980	52074	52074					-0.04244725310059039
QSATPVKRPRV	11	Unmodified	_QSATPVKRPRV_					0	0	0			REV__ENST00000373578.6_1_20:36022665-36024618:+|nuORF	REV__ENST00000373578.6_1_20:36022665-36024618:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8701171875	2	619.870028	1237.7255	1.7162	0.0010638	-2.4227	-0.0015017	-0.70652	-0.00043795	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.75544	1	11604	11604		20.837	0.80668	1	4719500	+		46089	25766	30968	30981	52075	52075					0.11614974819917734
QSCSVVEQPS	10	Unmodified	_QSCSVVEQPS_					0	0	0			REV__ENST00000533897.1_1_11:88027176-88029469:-|nuORF	REV__ENST00000533897.1_1_11:88027176-88029469:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.2373046875	2	532.239864	1062.46517	-0.9634	-0.00051276	-2.5507	-0.0013576	-3.5141	-0.0018704	532.2382568703794	39.812	0.68723	39.821	39.47	40.158	0.0092812					41	15	4	0	0	0	0.60066	1	2816	2816		50.034	2.3762	1	274680	+		46090	17778	30969	30982	52076	52076					-0.0635597829307244
QSCYVPVCCKP	11	3 Carbamidomethyl (C)	_QSC(Carbamidomethyl (C))YVPVC(Carbamidomethyl (C))C(Carbamidomethyl (C))KP_	QSC(1)YVPVC(1)C(1)KP		QSC(54)YVPVC(54)C(54)KP		0	3	0		ENSG00000241123|ENST00000400372|KRTAP10-5	ENSG00000241123|ENST00000400372|KRTAP10-5	ENSG00000241123|ENST00000400372|KRTAP10-5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.53912353515625	3	466.538531	1396.59376	-1.3813	-0.00064444	2.1886	0.0010211	0.80724	0.00037661	466.5398648650698	30.629	1.8414	30.658	29.964	31.805	0.028618					115	41	6	0	0	0	0.47591	1	2011	2011		53.597	18.419	1	9322400			46091	8788	30970	30983	52077	52077	108;109;110				-0.0886708264599747
QSDFKLRST	9	Unmodified	_QSDFKLRST_					0	0	0			REV__ENST00000321521.13_1_5:102537656-102537803:+|nuORF	REV__ENST00000321521.13_1_5:102537656-102537803:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	541.2881469726562	2	541.285463	1080.55637	-1.7029	-0.00092177	1.6465	0.00089123	-0.056423	-3.0541E-05	541.2862100780545	20.29	0.5934	20.29	20.067	20.66	0					57	27	3	0	0	0	0.71772	1	494	494		39.253	2.8061	1	123340	+		46092	25013	30971	30984	52078	52078					0.019316534665676954
QSDMEILY	8	Unmodified	_QSDMEILY_					0	0	0			REV__ENSG00000185722|ENST00000341657|ANKFY1	REV__ENSG00000185722|ENST00000341657|ANKFY1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	499.7283630371094	2	499.7286	997.442648	-1.3395	-0.00066936	1.5174	0.00075829	0.17794	8.8924E-05	499.7291395948651	73.087	0.42794	73.129	72.862	73.29	0.042114					37	16	3	0	0	0	0.79403	1	7056	7056		63.306	3.0123	1	256480	+		46093	22787	30972	30985	52079	52079					-0.05617577690691178
QSDNLVPNY	9	Unmodified	_QSDNLVPNY_					0	0	0			REV__nc|ENSG00000178150|Q8NC26-2|ZNF114	REV__nc|ENSG00000178150|Q8NC26-2|ZNF114	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.2484130859375	2	525.248546	1048.48254	0.8511	0.00044704	-0.93445	-0.00049082	-0.083342	-4.3775E-05	525.2479309242038	26.545	0.78844	26.516	26.103	26.891	-0.029093					41	16	3	0	0	0	0.14236	1	1137	1137		85.161	2.4103	1	239470	+		46094	22258	30973	30986	52080	52080					-0.03976314695751171
QSDPKPSQY	9	Unmodified	_QSDPKPSQY_					0	0	0		ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF	ENSG00000137501|ENST00000359152|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.2484130859375	2	525.248546	1048.48254	0.59696	0.00031355	-0.25295	-0.00013286	0.34402	0.00018069	525.2482352365844	26.176	0.81921	26.221	25.836	26.655	0.045507					58	23	4	0	0	0	0.39367	4	1069	1069;1076;1086;1108		58.23	12.258	1	219750			46095	4207	30974	30987	52081;52082;52083;52084	52081					-0.03976314695751171
QSDPKPSQY	9	Unmodified	_QSDPKPSQY_					0	0	0		ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF	ENSG00000137501|ENST00000359152|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.2484130859375	2	525.248546	1048.48254	0.16335	8.5798E-05	-0.22004	-0.00011558	-0.056695	-2.9779E-05	525.248320459045	26.453	0.85244	26.415	26.017	26.87	-0.038525					42	18	4	0	0	0	0.059135	3	1207	1184;1195;1207		104.06	31.088	1	297920			46096	4207	30974	30987	52085;52086;52087	52087					-0.03976314695751171
QSDPKPSQY	9	Unmodified	_QSDPKPSQY_					0	0	0		ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF	ENSG00000137501|ENST00000359152|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.2484741210938	2	525.248546	1048.48254	0.8511	0.00044704	-0.93445	-0.00049082	-0.083342	-4.3775E-05	525.2479309242038	26.545	0.78844	26.516	26.103	26.891	-0.029093					41	16	3	0	0	0	0.64555	1	1125	1125		44.377	4.319	1	239470			46097	4207	30974	30987	52088	52088					-0.03976314695751171
QSDPKPSQY	9	Unmodified	_QSDPKPSQY_					0	0	0		ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF	ENSG00000137501|ENST00000359152|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	525.248546	1048.48254	-0.26109	-0.00013714	0.63317	0.00033257	0.37209	0.00019544	525.2493057425573	26.529	0.31881	26.596	26.38	26.699	0.066877	0.15277	0.00044113	NaN	104.06	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41792			46098	4207	30974	30987							-0.03976314695751171
QSDPKPSQY	9	Unmodified	_QSDPKPSQY_					0	0	0		ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF	ENSG00000137501|ENST00000359152|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	525.248546	1048.48254	0.15618	8.2036E-05	2.7498	0.0014443	2.906	0.0015264	525.251457491297	26.357	0.054373	26.466	26.424	26.478	0.10901	0.023666	0.0026647	NaN	104.06	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37541			46099	4207	30974	30987							-0.03976314695751171
QSDSDDEESH	10	Unmodified	_QSDSDDEESH_					0	0	0			REV__nc|ENSG00000152592|Q13316-2|DMP1	REV__nc|ENSG00000152592|Q13316-2|DMP1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.7018432617188	2	574.702354	1147.39015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.689	1	15.689	15.189	16.189	0								0	0	0	0.45132	1	57	57		20.947	0.95016	1		+		46100	15843	30975	30988	52089	52089					-0.17764489290584606
QSEIASMLY	9	Oxidation (M)	_QSEIASM(Oxidation (M))LY_		QSEIASM(1)LY		QSEIASM(55)LY	0	0	1		nc|ENSG00000197256|Q63ZY3-3|KANK2;ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2;ENST00000587317.1_1_19:11277236-11281082:-|nuORF	nc|ENSG00000197256|Q63ZY3-3|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.248291015625	2	529.247157	1056.47976	-0.58312	-0.00030862	0.66741	0.00035323	0.084291	4.4611E-05	529.2471839475656	60.1	0.91259	60.133	59.558	60.471	0.032822					47	23	3	0	0	0	0.44421	1	5587	5587		54.776	8.0099	1	204410			46101	8148	30976	30989	52090	52090		140			-0.046219061449164656
QSENDGFVQAL	11	Unmodified	_QSENDGFVQAL_					0	0	0			REV__ENSG00000235961|ENST00000421798|PNMA6A	REV__ENSG00000235961|ENST00000421798|PNMA6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.2852172851562	2	604.283117	1206.55168	-0.10714	-6.4745E-05	3.51	0.0021211	3.4029	0.0020563	604.2851451198585	29.872	0.8398	29.897	29.538	30.377	0.025013					42	21	3	0	0	0	0.55601	1	1499	1499		47.96	2.0076	1	166430	+		46102	23787	30977	30990	52091	52091					-0.04333275466842679
QSFIPRPVV	9	Unmodified	_QSFIPRPVV_					0	0	0			REV__ENSG00000141449|ENST00000424526|GREB1L	REV__ENSG00000141449|ENST00000424526|GREB1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.8052978515625	2	521.805834	1041.59712	-0.11311	-5.9022E-05	0.53405	0.00027867	0.42094	0.00021965	521.8059245005005	44.852	1.3013	45.315	44.578	45.88	0.46313					77	31	3	0	0	0	0.74721	1	4079	4079		37.159	3.2375	1	1090800	+		46103	19687	30978	30991	52092	52092					0.0779803957684635
QSFSSNSLLY	10	Unmodified	_QSFSSNSLLY_					0	0	0			REV__nc|ENSG00000179869|Q86UQ4|ABCA13	REV__nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.276611328125	2	573.277303	1144.54005	-0.12319	-7.0624E-05	0.18851	0.00010807	0.065316	3.7444E-05	573.277411621475	25.214	0.61848	25.173	24.893	25.511	-0.04117					30	16	3	0	0	0	0.70553	1	1048	1048		44.377	0	1	68124	+		46104	22360	30979	30992	52093	52093					-0.026434724901719164
QSGAPYVHAAP	11	Unmodified	_QSGAPYVHAAP_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.2678833007812	2	549.272355	1096.53016	-1.3279	-0.00072939	-0.016974	-9.3236E-06	-1.3449	-0.00073872	549.2722721223713	43.521	0.52309	43.521	43.221	43.744	0					23	12	2	0	0	0	0.51007	1	3096	3096		51.193	1.6567	1	162310	+		46105	18072	30980	30993	52094	52094					-0.01424615704900134
QSGLPQHL	8	Unmodified	_QSGLPQHL_					0	0	0			REV__ENST00000545128.5_1_9:78505928-78547329:+|nuORF	REV__ENST00000545128.5_1_9:78505928-78547329:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.23760986328125	2	440.237784	878.461016	0.94186	0.00041464	-0.30074	-0.0001324	0.64113	0.00028225	440.23748516276834	18.134	0.355	18.21	18.063	18.418	0.075441					16	9	2	0	0	0	0.89962	1	249	249		38.806	3.1879	1	75602	+		46106	28519	30981	30994	52095	52095					0.016923450661806783
QSGSFKLLFV	10	Unmodified	_QSGSFKLLFV_					0	0	0			REV__ENST00000474151.1_2_3:143567217-143567274:-|nuORF	REV__ENST00000474151.1_2_3:143567217-143567274:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	563.81396484375	2	563.318774	1124.623	-1.0735	-0.0006047	-2.958	-0.0016663	-4.0315	-0.002271	563.8174777116847	55.775	1.0022	55.775	55.238	56.24	0					49	27	4	0	0	0	0.86106	1	4749	4749		33.922	3.418	1	74923	+		46107	27294	30982	30995	52096	52096					0.0656688902845417
QSGSQSLST	9	Unmodified	_QSGSQSLST_					0	0	0		ENST00000373517.3_1_X:72434272-72434665:-|nuORF	ENST00000373517.3_1_X:72434272-72434665:-|nuORF	ENST00000373517.3_1_X:72434272-72434665:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.2587890625	2	447.711796	893.40904	-1.7839	-0.00079869	2.8248	0.0012647	1.0409	0.00046602	447.7132863970788	90.176	0.29626	90.352	90.215	90.511	0.1758					9	6	2	0	0	0	0.20789	1	8970	8970		19.104	5.6495	1	38755			46108	10746	30983	30996	52097	52097					-0.0419286313823477
QSHALPMLIT	10	Unmodified	_QSHALPMLIT_					0	0	0			REV__ENST00000337975.5_1_15:86303082-86303469:-|nuORF	REV__ENST00000337975.5_1_15:86303082-86303469:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.7996215820312	2	555.802434	1109.59032	-0.68057	-0.00037826	-1.8433	-0.0010245	-2.5239	-0.0014028	555.8013013120557	48.198	0.42183	48.189	48.005	48.427	-0.0093269					15	9	2	0	0	0	0.60985	1	3989	3989		49.536	8.7579	1	141670	+		46109	25210	30984	30997	52098	52098					0.03990358633973301
QSHPLRRVP	9	Unmodified	_QSHPLRRVP_					0	0	0		ENSG00000148408|ENST00000371372|CACNA1B	ENSG00000148408|ENST00000371372|CACNA1B	ENSG00000148408|ENST00000371372|CACNA1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3168334960938	2	545.317432	1088.62031	1.1684	0.00063715	-2.5262	-0.0013776	-1.3578	-0.00074041	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.67345	1	8997	8997		42.396	5.237	1	4705800			46110	4960	30985	30998	52099	52099					0.07954478414194455
QSHSPHCFAP	10	Unmodified	_QSHSPHCFAP_					0	0	0			REV__ENST00000264657.9_1_17:40467570-40467729:-|nuORF	REV__ENST00000264657.9_1_17:40467570-40467729:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.7406616210938	2	555.742908	1109.47126	-0.71842	-0.00039926	0.40658	0.00022595	-0.31184	-0.0001733	555.7429779562151	49.338	0.53163	49.335	49.092	49.624	-0.0030327					21	11	2	0	0	0	0.80179	1	4119	4119		39.253	1.4413	1	191470	+		46111	24476	30986	30999	52100	52100					-0.07909415270887621
QSHVPKTLN	9	Unmodified	_QSHVPKTLN_					0	0	0			REV__ENST00000504330.5_1_4:187070406-187073132:+|nuORF	REV__ENST00000504330.5_1_4:187070406-187073132:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2831420898438	2	512.282723	1022.55089	-0.052062	-2.6671E-05	-2.6058	-0.0013349	-2.6579	-0.0013616	512.2812910993212	86.454	3.487	86.521	85.51	88.997	0.067436					149	81	2	0	0	0	0.76255	1	8689	8689		35.618	1.4457	1	329990	+		46112	27855	30987	31000	52101	52101					0.04051974674769099
QSHYFHRDRLN	11	Unmodified	_QSHYFHRDRLN_					0	0	0		nc|ENSG00000110768|P32780-2|GTF2H1;ENST00000418116.6_1_11:18344284-18382305:+|nuORF;ENSG00000110768|ENST00000265963|GTF2H1	nc|ENSG00000110768|P32780-2|GTF2H1	nc|ENSG00000110768|P32780-2|GTF2H1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2482604980469	3	491.576241	1471.70689	-0.259	-0.00012732	-2.5497	-0.0012534	-2.8087	-0.0013807	491.5746186450395	49.866	0.288	50.314	50.143	50.431	0.44761					10	6	2	0	0	0	0.17521	1	4861	4861		22.562	0	1	258830			46113	2540	30988	31001	52102	52102					-0.010091868219205935
QSIAFGGK	8	Unmodified	_QSIAFGGK_					0	0	0		ENSG00000205858|ENST00000401542|LRRC72	ENSG00000205858|ENST00000401542|LRRC72	ENSG00000205858|ENST00000401542|LRRC72	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9101867675781	2	404.221603	806.428653	-0.406	-0.00016412	-3.7748	-0.0015258	-4.1808	-0.00169	404.2212146358592	69.088	0.67314	69.635	69.154	69.827	0.54693					23	15	2	0	0	0	0.4196	1	7625	7625		11.511	4.3177	1	79254			46114	8545	30989	31002	52103	52103					0.01769557663192245
QSIAFLQEVY	10	Unmodified	_QSIAFLQEVY_					0	0	0		nc|ENSG00000100888|Q9HCK8-2|CHD8;ENSG00000100888|ENST00000646647|CHD8	nc|ENSG00000100888|Q9HCK8-2|CHD8	nc|ENSG00000100888|Q9HCK8-2|CHD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	599.3115844726562	2	599.311146	1196.60774	-0.26172	-0.00015685	1.59	0.00095289	1.3283	0.00079604	599.3119061414959	28.738	0.55452	28.709	28.443	28.997	-0.029207					32	12	3	0	0	0	0.60985	1	1756	1756		49.536	0.094497	1	286930			46115	1879	30990	31003	52104	52104					0.017299774406183133
QSIDESTKSKT	11	Unmodified	_QSIDESTKSKT_					0	0	0			REV__nc|ENSG00000173210|O94929-2|ABLIM3	REV__nc|ENSG00000173210|O94929-2|ABLIM3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.565673828125	3	408.54198	1222.60411	0.052747	2.1549E-05	1.488	0.00060791	1.5407	0.00062946	408.877187880732	59.34	0.19896	59.73	59.651	59.85	0.39077					5	4	2	0	0	0	0.17424	1	6246	6246		27.554	0	1	29568	+		46116	21901	30991	31004	52105	52105					0.001712628760969892
QSIPGLLKKSD	11	Unmodified	_QSIPGLLKKSD_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-3|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-3|HDAC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.343017578125	2	593.34552	1184.67649	-0.64573	-0.00038314	-1.1769	-0.00069831	-1.8226	-0.0010814	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.72106	1	11259	11259		28.081	3.5623	1	2296600	+		46117	17736	30992	31005	52106	52106					0.09153641740317653
QSIPGLLKKSD	11	Unmodified	_QSIPGLLKKSD_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-3|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-3|HDAC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.3455200195312	2	593.34552	1184.67649	0.88436	0.00052473	-2.7449	-0.0016287	-1.8605	-0.0011039	593.343785503265	103.21	2.4131	103.4	103.04	105.46	0.18297					159	60	4	0	0	0	0.69248	4	10879	10879;10915;10964;11014		32.751	2.4328	1	4232500	+		46118	17736	30992	31005	52107;52108;52109;52110	52107					0.09153641740317653
QSIPGLLKKSD	11	Unmodified	_QSIPGLLKKSD_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-3|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-3|HDAC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.3436279296875	2	593.34552	1184.67649	0.89398	0.00053044	-2.6243	-0.0015571	-1.7303	-0.0010267	593.3438403936742	103.36	2.3929	103.49	103.05	105.45	0.12621					170	59	5	0	0	0	0.69248	4	10922	10922;10934;10957;11017		32.751	11.065	1	4092800	+		46119	17736	30992	31005	52111;52112;52113;52114	52111					0.09153641740317653
QSIPGLLKKSD	11	Unmodified	_QSIPGLLKKSD_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-3|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-3|HDAC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3441162109375	2	593.34552	1184.67649	-1.311	-0.00077786	-0.43407	-0.00025755	-1.745	-0.0010354	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.72106	2	10873	10861;10873		28.081	1.689	1	3957400	+		46120	17736	30992	31005	52115;52116	52116					0.09153641740317653
QSIPKRVLELP	11	Unmodified	_QSIPKRVLELP_					0	0	0			REV__nc|ENSG00000108389|Q9NYA4|MTMR4	REV__nc|ENSG00000108389|Q9NYA4|MTMR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3927612304688	2	640.390262	1278.76597	0.064657	4.1406E-05	3.9219	0.0025115	3.9865	0.0025529	640.3927299544963	53.652	0.88778	53.59	53.086	53.973	-0.062065					49	22	3	0	0	0	0.732	1	4385	4385		26.063	1.5442	1	245330	+		46121	17707	30993	31006	52117	52117					0.13773896419684206
QSIQKYIKSHY	11	Unmodified	_QSIQKYIKSHY_					0	0	0		nc|ENSG00000189060|P07305-2|H1-0;ENSG00000189060|ENST00000340857|H1-0	nc|ENSG00000189060|P07305-2|H1-0	nc|ENSG00000189060|P07305-2|H1-0	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.9197692871094	3	465.585743	1393.7354	0.2075	9.6607E-05	-3.2102	-0.0014946	-3.0027	-0.001398	465.5842362867719	38.49	0.71319	38.584	38.211	38.924	0.094322					46	23	3	0	0	0	0.70278	1	2285	2285		31.068	2.4914	1	215500			46122	7986	30994	31007	52118	52118					0.05428118034660656
QSIQKYIKSHY	11	Unmodified	_QSIQKYIKSHY_					0	0	0		nc|ENSG00000189060|P07305-2|H1-0;ENSG00000189060|ENST00000340857|H1-0	nc|ENSG00000189060|P07305-2|H1-0	nc|ENSG00000189060|P07305-2|H1-0	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	465.585743	1393.7354	0.10565	4.919E-05	-3.3356	-0.001553	-3.23	-0.0015038	465.5843080261838	38.778	0.31252	38.75	38.631	38.943	-0.027843	0.17758	-0.0010941	NaN	31.068	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38546			46123	7986	30994	31007							0.05428118034660656
QSIQKYIKSHY	11	Unmodified	_QSIQKYIKSHY_					0	0	0		nc|ENSG00000189060|P07305-2|H1-0;ENSG00000189060|ENST00000340857|H1-0	nc|ENSG00000189060|P07305-2|H1-0	nc|ENSG00000189060|P07305-2|H1-0	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	465.585743	1393.7354	-1.1361	-0.00052896	-2.0426	-0.000951	-3.1787	-0.00148	465.58465562258345	38.568	0.49518	38.521	38.33	38.825	-0.047001	-0.051971	0.00071198	NaN	31.068	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43870			46124	7986	30994	31007							0.05428118034660656
QSIQKYIKSHY	11	Unmodified	_QSIQKYIKSHY_					0	0	0		nc|ENSG00000189060|P07305-2|H1-0;ENSG00000189060|ENST00000340857|H1-0	nc|ENSG00000189060|P07305-2|H1-0	nc|ENSG00000189060|P07305-2|H1-0	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	465.585743	1393.7354	-2.0438	-0.00095158	-1.1559	-0.00053817	-3.1997	-0.0014898	465.5849878147322	38.593	0.48898	38.605	38.317	38.806	0.011173	0.031779	0.0019504	NaN	31.068	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48088			46125	7986	30994	31007							0.05428118034660656
QSIQKYIKSHY	11	Unmodified	_QSIQKYIKSHY_					0	0	0		nc|ENSG00000189060|P07305-2|H1-0;ENSG00000189060|ENST00000340857|H1-0	nc|ENSG00000189060|P07305-2|H1-0	nc|ENSG00000189060|P07305-2|H1-0	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	465.585743	1393.7354	-0.50729	-0.00023619	-2.3741	-0.0011053	-2.8813	-0.0013415	465.5848122717843	38.112	0.62054	38.437	38.139	38.76	0.32505	-0.13546	0.00024898	NaN	31.068	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122530			46126	7986	30994	31007							0.05428118034660656
QSIQKYIKSHY	11	Unmodified	_QSIQKYIKSHY_					0	0	0		nc|ENSG00000189060|P07305-2|H1-0;ENSG00000189060|ENST00000340857|H1-0	nc|ENSG00000189060|P07305-2|H1-0	nc|ENSG00000189060|P07305-2|H1-0	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	465.585743	1393.7354	-0.25542	-0.00011892	-2.6931	-0.0012539	-2.9486	-0.0013728	465.91871821365146	37.912	0.38274	38.435	38.21	38.593	0.52235	-0.13817	-0.00019669	NaN	31.068	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130470			46127	7986	30994	31007							0.05428118034660656
QSIRGFVQK	9	Unmodified	_QSIRGFVQK_					0	0	0		ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.805419921875	2	531.806365	1061.59818	0.79171	0.00042104	-0.96667	-0.00051408	-0.17496	-9.3044E-05	531.8057678754459	25.234	0.65381	24.905	24.658	25.312	-0.32825					23	14	2	0	0	0	0.30689	1	1297	1297		64.207	3.2353	1	459040			46128	7861	30995	31008	52119	52119					0.06984253945756791
QSIRKTPSKY	10	Unmodified	_QSIRKTPSKY_					0	0	0			REV__ENST00000547611.5_1_12:95645768-95660218:+|nuORF	REV__ENST00000547611.5_1_12:95645768-95660218:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3661499023438	2	604.343312	1206.67207	3.2064	0.0019377	-4.4734	-0.0027035	-1.2671	-0.00076574	604.3403198014355	104.83	0.99816	104.79	104.23	105.23	-0.04039					30	23	2	0	0	0	0.37624	1	11452	11452		29.551	16.739	1	556640	+		46129	28554	30996	31009	52120	52120					0.07700177317406087
QSIRRLPIKV	10	Unmodified	_QSIRRLPIKV_					0	0	0			REV__nc|ENSG00000163485|P30542-2|ADORA1	REV__nc|ENSG00000163485|P30542-2|ADORA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.92962646484375	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.8486	1	3968	3968		12.957	0	1	2636600	+		46130	29982	30997	31010	52121	52121					0.17569039722025082
QSIRRLPIKV	10	Unmodified	_QSIRRLPIKV_					0	0	0			REV__nc|ENSG00000163485|P30542-2|ADORA1	REV__nc|ENSG00000163485|P30542-2|ADORA1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.92974853515625	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.929	1	47.836	47.336	48.336	-0.093178								0	0	0	0.45132	1	3618	3618		17.167	3.0807	1		+		46131	29982	30997	31010	52122	52122					0.17569039722025082
QSKDTVQAD	9	Unmodified	_QSKDTVQAD_					0	0	0		ENSG00000135837|ENST00000367607|CEP350	ENSG00000135837|ENST00000367607|CEP350	ENSG00000135837|ENST00000367607|CEP350	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.23773193359375	2	496.238178	990.461803	0.25594	0.00012701	-0.12078	-5.9935E-05	0.13516	6.7074E-05	496.2378970327027	30.637	0.71332	30.662	30.337	31.05	0.025013					40	21	3	0	0	0	0.66686	1	1597	1597		42.864	1.4377	1	168640			46132	4057	30998	31011	52123	52123					-0.03380905075425744
QSKDTVQAD	9	Unmodified	_QSKDTVQAD_					0	0	0		ENSG00000135837|ENST00000367607|CEP350	ENSG00000135837|ENST00000367607|CEP350	ENSG00000135837|ENST00000367607|CEP350	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	496.23748779296875	2	496.238178	990.461803	-1.1591	-0.00057517	1.339	0.00066446	0.17994	8.9292E-05	496.238618590653	30.86	0.93819	30.85	30.405	31.344	-0.010656					47	23	4	0	0	0	0.78912	1	1636	1636		28.081	0.19925	1	242080			46133	4057	30998	31011	52124	52124					-0.03380905075425744
QSKIKENR	8	Unmodified	_QSKIKENR_					0	0	0		ENST00000553956.6_1_17:62527116-62533894:+|nuORF;ENST00000580285.1_1_17:62529306-62530930:+|nuORF;nc|ENSG00000258890|Q96GE4-2|CEP95;ENSG00000258890|ENST00000556440|CEP95	ENST00000553956.6_1_17:62527116-62533894:+|nuORF	ENST00000553956.6_1_17:62527116-62533894:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.7738342285156	2	501.788173	1001.56179	2.6083	0.0013088	3.9713	0.0019928	6.5797	0.0033016	502.29238059971635	25.112	0.31276	24.681	24.582	24.895	-0.4311					9	6	2	0	0	0	0.4196	1	1291	1291		58.782	0	1	30548			46134	13713	30999	31012	52125	52125					0.061073770490338575
QSKLQSTHGP	10	Unmodified	_QSKLQSTHGP_					0	0	0			REV__nc|ENSG00000168016|O15050|TRANK1	REV__nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	542.2853393554688	2	541.783087	1081.55162	-0.22268	-0.00012064	4.2763	0.0023168	4.0536	0.0021962	541.7852590351226	56.903	1.7601	56.891	56.59	58.35	-0.012203					157	62	4	0	0	0	0.86218	1	5250	5250		32.812	0	1	5602900	+		46135	21451	31000	31013	52126	52126					0.014107693237974672
QSKPSAPP	8	Unmodified	_QSKPSAPP_					0	0	0		nc|ENSG00000105426|Q13332-6|PTPRS;nc|ENSG00000105426|Q13332-3|PTPRS;nc|ENSG00000105426|Q13332-4|PTPRS;nc|ENSG00000105426|Q13332-2|PTPRS;ENSG00000105426|ENST00000262963|PTPRS;nc|ENSG00000153707|P23468-2|PTPRD;ENSG00000153707|ENST00000381196|PTPRD	nc|ENSG00000105426|Q13332-6|PTPRS	nc|ENSG00000105426|Q13332-6|PTPRS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2183532714844	2	406.21906	810.423567	-0.18719	-7.6038E-05	-3.3585	-0.0013643	-3.5457	-0.0014403	406.21765935142207	85.949	1.2831	86.016	85.51	86.793	0.067261					53	29	3	0	0	0	0.87479	1	8641	8641		30.504	0	1	243950			46136	2215	31001	31014	52127	52127					0.0107725380055399
QSKQSISDMSS	11	Unmodified	_QSKQSISDMSS_					0	0	0			REV__ENSG00000064999|ENST00000360359|ANKS1A	REV__ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.2750244140625	2	599.274435	1196.53432	-0.62158	-0.0003725	3.9625	0.0023747	3.341	0.0020022	599.2767741911099	17.984	0.17394	17.905	17.829	18.003	-0.078941					9	6	2	0	0	0	0.69931	1	281	281		31.634	3.5528	1	24784	+		46137	16488	31002	31015	52128	52128					-0.05608939064177321
QSKQSISDMSS	11	Unmodified	_QSKQSISDMSS_					0	0	0			REV__ENSG00000064999|ENST00000360359|ANKS1A	REV__ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	599.274435	1196.53432	0.55104	0.00033023	2.7302	0.0016362	3.2813	0.0019664	599.2761991025967	17.708	0.28541	17.783	17.718	18.003	0.075441	-0.060648	-0.00078575	NaN	31.634	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24771	+		46138	16488	31002	31015							-0.05608939064177321
QSKQSISDMSS	11	Unmodified	_QSKQSISDMSS_					0	0	0			REV__ENSG00000064999|ENST00000360359|ANKS1A	REV__ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	599.274435	1196.53432	-0.62158	-0.0003725	3.9625	0.0023747	3.341	0.0020022	599.2767741911099	17.984	0.17394	17.905	17.829	18.003	-0.078941	0.060648	0.00069126	NaN	31.634	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24784	+		46139	16488	31002	31015							-0.05608939064177321
QSKSVLIRG	9	Unmodified	_QSKSVLIRG_					0	0	0			REV__ENST00000542698.1_1_12:120117647-120118127:+|nuORF	REV__ENST00000542698.1_1_12:120117647-120118127:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.3009033203125	2	494.300916	986.587279	-0.7737	-0.00038244	0.64363	0.00031815	-0.13007	-6.4295E-05	494.3011465997647	101.19	1.3573	101.19	100.82	102.17	0					71	32	4	0	0	0	0.77244	1	10333	10333		32.812	0	1	465620	+		46140	28501	31003	31016	52129	52129					0.09344851571484014
QSLDVGTIQF	10	Unmodified	_QSLDVGTIQF_					0	0	0		ENSG00000112706|ENST00000369950|IMPG1	ENSG00000112706|ENST00000369950|IMPG1	ENSG00000112706|ENST00000369950|IMPG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.28759765625	2	554.287671	1106.56079	-0.81094	-0.00044949	0.24528	0.00013596	-0.56565	-0.00031354	554.2876595285483	60.14	0.93211	60.127	59.719	60.651	-0.013729					69	23	5	0	0	0	0.2575	1	5592	5592		77.318	5.4401	1	1684300			46141	2677	31004	31017	52130	52130					0.011771178894605328
QSLELLLLP	9	Unmodified	_QSLELLLLP_					0	0	0		nc|ENSG00000151612|Q17R98-2|ZNF827;ENSG00000151612|ENST00000508784|ZNF827	nc|ENSG00000151612|Q17R98-2|ZNF827	nc|ENSG00000151612|Q17R98-2|ZNF827	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.319091796875	2	513.3157	1024.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.261	1	53.257	52.757	53.757	-0.0033035								0	0	0	0.30053	1	4647	4647		30.504	1.3541	1				46142	5129	31005	31018	52131	52131					0.10552370796949617
QSLGKLLAPPL	11	Unmodified	_QSLGKLLAPPL_					0	0	0			REV__ENST00000275732.5_1_7:100286326-100286413:-|nuORF	REV__ENST00000275732.5_1_7:100286326-100286413:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8536987304688	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.74763	1	11248	11248		22.58	1.6327	1	50786000	+		46143	24574	31006	31019	52132	52132					0.13407437470914374
QSLGKLLAPPL	11	Unmodified	_QSLGKLLAPPL_					0	0	0			REV__ENST00000275732.5_1_7:100286326-100286413:-|nuORF	REV__ENST00000275732.5_1_7:100286326-100286413:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8532104492188	2	568.855524	1135.69649	-1.3907	-0.00079112	-2.9165	-0.001659	-4.3072	-0.0024502	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.66929	1	10736	10736		36.447	2.2742	1	72465000	+		46144	24574	31006	31019	52133	52133					0.13407437470914374
QSLHVCKN	8	Carbamidomethyl (C)	_QSLHVC(Carbamidomethyl (C))KN_	QSLHVC(1)KN		QSLHVC(46)KN		0	1	0			REV__ENSG00000168702|ENST00000389484|LRP1B	REV__ENSG00000168702|ENST00000389484|LRP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.244873046875	2	493.247826	984.481099	-1.1617	-0.000573	-2.4684	-0.0012175	-3.63	-0.0017905	493.24654239461523	27.911	1.9472	27.888	27.422	29.369	-0.023556					123	54	4	0	0	0	0.91977	1	1281	1281		45.952	7.1458	1	1012800	+		46145	21512	31007	31020	52134	52134	264				-0.011762272655118977
QSLILVRR	8	Unmodified	_QSLILVRR_					0	0	0			REV__nc|ENSG00000183495|Q96L91-4|EP400	REV__nc|ENSG00000183495|Q96L91-4|EP400	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.7904968261719	2	492.819276	983.623999	0.3957	0.00019501	-0.51454	-0.00025358	-0.11884	-5.8569E-05	492.81880759766534	32.002	0.5148	32.109	31.845	32.36	0.10707					26	11	3	0	0	0	0.4196	1	2194	2194		19.997	0	1	175210	+		46146	22609	31008	31021	52135	52135					0.13153148188030173
QSLLPDKQVLL	11	Unmodified	_QSLLPDKQVLL_					0	0	0			REV__ENSG00000167077|ENST00000401548|MEI1	REV__ENSG00000167077|ENST00000401548|MEI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8820190429688	2	627.37682	1252.73909	6.5832	0.0041301	2.6289	0.0016493	9.2121	0.0057794	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.7434	1	13782	13782		23.523	2.5758	1	94412	+		46147	21349	31009	31022	52136	52136					0.12282787808521789
QSLLPDVR	8	Unmodified	_QSLLPDVR_					0	0	0			REV__ENSG00000005108|ENST00000423059|THSD7A	REV__ENSG00000005108|ENST00000423059|THSD7A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7796325683594	2	464.266542	926.51853	-1.3659	-0.00063412	1.8326	0.0008508	0.46672	0.00021668	464.26706148325957	38.99	0.4741	39.545	39.36	39.834	0.55449					22	10	3	0	0	0	0.4196	1	3235	3235		26.693	20.38	1	110250	+		46148	16075	31010	31023	52137	52137					0.052331872717559236
QSLLPDVR	8	Unmodified	_QSLLPDVR_					0	0	0			REV__ENSG00000005108|ENST00000423059|THSD7A	REV__ENSG00000005108|ENST00000423059|THSD7A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	464.266542	926.51853	-1.3197	-0.00061268	0.85375	0.00039637	-0.46593	-0.00021632	464.2667210202489	39.143	0.47163	39.496	39.243	39.714	0.35293	-0.024498	-0.00041053	NaN	39.253	16	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76753	+		46149	16075	31010	31023							0.052331872717559236
QSLLQLWK	8	Unmodified	_QSLLQLWK_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000557024.1_1_14:64625447-64629048:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2984313964844	2	508.300384	1014.58622	-0.95406	-0.00048495	-2.3293	-0.001184	-3.2833	-0.0016689	508.2985875373154	30.098	0.79341	30.126	29.833	30.627	0.028618					61	17	6	0	0	0	0.72312	1	1933	1933		66.429	6.311	1	1055000			46150	14756	31011	31024	52138	52138					0.07950637202543476
QSLTAVPIN	9	Unmodified	_QSLTAVPIN_					0	0	0			REV__ENSG00000162419|ENST00000373816|GMEB1	REV__ENSG00000162419|ENST00000373816|GMEB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76910400390625	2	471.766374	941.518196	0.35269	0.00016639	-2.2368	-0.0010552	-1.8841	-0.00088885	471.7646332483829	50.38	0.78066	50.828	50.599	51.38	0.44761					31	18	2	0	0	0	0.20789	1	4926	4926		45.972	18.09	1	115290	+		46151	20813	31012	31025	52139	52139					0.045097675518945834
QSMRGPLI	8	Unmodified	_QSMRGPLI_					0	0	0			REV__nc|ENSG00000177034|Q5HYI7-2|MTX3	REV__nc|ENSG00000177034|Q5HYI7-2|MTX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.24725341796875	2	451.249837	900.485122	-0.10221	-4.6121E-05	-2.4347	-0.0010987	-2.537	-0.0011448	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.87479	1	6471	6471		30.504	2.2494	1	178200	+		46152	30055	31013	31026	52140	52140					0.0308986222820522
QSPDVHHSLAK	11	Unmodified	_QSPDVHHSLAK_					0	0	0			REV__ENSG00000149633|ENST00000279024|KIAA1755	REV__ENSG00000149633|ENST00000279024|KIAA1755	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.8786926269531	3	406.879038	1217.61528	-2.1643	-0.00088061	2.6695	0.0010862	0.50523	0.00020557	406.88003973926544	18.414	0.41613	18.414	18.223	18.639	0					39	16	3	0	0	0	0.70278	1	294	294		31.068	1.5174	1	262240	+		46153	20185	31014	31027	52141	52141					0.015181297608933164
QSPKGKNVTT	10	Unmodified	_QSPKGKNVTT_					0	0	0		ENST00000479810.6_1_21:42694930-42716440:+|nuORF;ENST00000398647.7_1_21:42688762-42716440:+|nuORF	ENST00000479810.6_1_21:42694930-42716440:+|nuORF	ENST00000479810.6_1_21:42694930-42716440:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2925415039062	2	530.293288	1058.57202	-0.066725	-3.5384E-05	0.20402	0.00010819	0.1373	7.2808E-05	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.85981	1	9242	9242		35.152	0.97948	1	2084800			46154	11188	31015	31028	52142	52142					0.04507939983614051
QSPKVSAKP	9	Unmodified	_QSPKVSAKP_					0	0	0			REV__ENSG00000168454|ENST00000357775|TXNDC2	REV__ENSG00000168454|ENST00000357775|TXNDC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2745361328125	2	471.274367	940.53418	-0.53957	-0.00025428	0.91162	0.00042962	0.37205	0.00017534	471.2746522155728	19.389	0.63108	18.759	18.444	19.075	-0.6296					29	13	3	0	0	0	0.29259	1	520	520		65.465	4.4934	1	103140	+		46155	21490	31016	31029	52143	52143					0.0615347378881097
QSPKVSAKP	9	Unmodified	_QSPKVSAKP_					0	0	0			REV__ENSG00000168454|ENST00000357775|TXNDC2	REV__ENSG00000168454|ENST00000357775|TXNDC2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	471.274367	940.53418	-0.53957	-0.00025428	0.91162	0.00042962	0.37205	0.00017534	471.2746522155728	19.389	0.63108	18.759	18.444	19.075	-0.6296	0.025443	0.0004317	NaN	65.465	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103140	+		46156	21490	31016	31029							0.0615347378881097
QSPLRCVV	8	Unmodified	_QSPLRCVV_					0	0	0		ENST00000475908.5_1_5:56205193-56212726:+|nuORF;ENSG00000155542|ENST00000285947|SETD9	ENST00000475908.5_1_5:56205193-56212726:+|nuORF	ENST00000475908.5_1_5:56205193-56212726:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2489013671875	2	451.249837	900.485122	-0.24052	-0.00010853	-1.8762	-0.00084665	-2.1168	-0.00095518	451.24888516204976	65.538	1.2999	65.566	64.989	66.289	0.027321					98	67	2	0	0	0	0.87922	1	6200	6200		31.955	1.4512	1	846940			46157	12332	31017	31030	52144	52144					0.0308986222820522
QSPLRSSSF	9	Unmodified	_QSPLRSSSF_					0	0	0			REV__ENST00000597741.1_1_19:43967385-43967493:-|nuORF	REV__ENST00000597741.1_1_19:43967385-43967493:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3456115722656	2	504.759081	1007.50361	0.21447	0.00010825	2.2974	0.0011596	2.5119	0.0012679	504.7624846064385	54.083	0.12661	54.49	54.403	54.53	0.40663					4	2	2	0	0	0	0.20789	1	5492	5492		51.193	6.8155	1	54421	+		46158	29271	31018	31031	52145	52145					0.00015695403772042482
QSPPTAPPSPL	11	Unmodified	_QSPPTAPPSPL_					0	0	0			REV__nc|ENSG00000183248|Q9H6K5-2|PRR36	REV__nc|ENSG00000183248|Q9H6K5-2|PRR36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.2862548828125	2	546.290214	1090.56587	-0.3732	-0.00020388	0.21184	0.00011572	-0.16137	-8.8154E-05	546.290162777225	62.855	0.44324	62.85	62.615	63.058	-0.0055504					31	17	2	0	0	0	0.66009	1	5843	5843		37.508	0.34906	1	95199	+		46159	22588	31019	31032	52146	52146					0.02421421752092101
QSPSSSNIPTQ	11	Unmodified	_QSPSSSNIPTQ_					0	0	0		ENST00000233596.7_3_19:1497206-1497893:+|nuORF	ENST00000233596.7_3_19:1497206-1497893:+|nuORF	ENST00000233596.7_3_19:1497206-1497893:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.2772216796875	2	573.275292	1144.53603	0.85446	0.00048984	2.6188	0.0015013	3.4733	0.0019911	573.2769023299956	25.232	0.65456	25.195	24.838	25.493	-0.037176					36	17	3	0	0	0	0.6493	1	997	997		38.754	2.3069	1	63206			46160	9225	31020	31033	52147	52147					-0.030455619838903658
QSPVCPKNLLK	11	Carbamidomethyl (C)	_QSPVC(Carbamidomethyl (C))PKNLLK_	QSPVC(1)PKNLLK		QSPVC(56)PKNLLK		0	1	0		ENST00000220592.9_2_8:141541824-141541974:-|nuORF	ENST00000220592.9_2_8:141541824-141541974:-|nuORF	ENST00000220592.9_2_8:141541824-141541974:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.3635864257812	2	642.360647	1282.70674	0.94222	0.00060524	1.992	0.0012796	2.9342	0.0018848	642.362532628932	110	1.3046	110.07	109.67	110.98	0.073685					156	47	4	0	0	0	0.43778	1	11879	11879		56.434	10.462	1	7000400			46161	9166	31021	31034	52148	52148	114				0.07669677133844743
QSQDGDRAGHP	11	Unmodified	_QSQDGDRAGHP_					0	0	0		ENST00000544283.5_1_2:91823926-91845846:-|nuORF	ENST00000544283.5_1_2:91823926-91845846:-|nuORF	ENST00000544283.5_1_2:91823926-91845846:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.2625732421875	2	584.260508	1166.50646	-1.8703	-0.0010928	3.9555	0.002311	2.0852	0.0012183	584.2626862461325	60.598	0.73638	60.629	60.275	61.012	0.031197					67	22	4	0	0	0	0.36477	1	5684	5684		62.107	0.41614	1	1332500			46162	13568	31022	31035	52149	52149					-0.07013081209379379
QSQHGGSH	8	Unmodified	_QSQHGGSH_					0	0	0		nc|ENSG00000204842|Q99700-5|ATXN2;ENSG00000204842|ENST00000673436|ATXN2;nc|ENSG00000204842|Q99700-4|ATXN2;nc|ENSG00000204842|Q99700|ATXN2;ENST00000468920.2_1_12:111893805-111895209:-|nuORF;nc|ENSG00000204842|Q99700-3|ATXN2;ENST00000482777.5_1_12:111893805-111908601:-|nuORF	nc|ENSG00000204842|Q99700-5|ATXN2	nc|ENSG00000204842|Q99700-5|ATXN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1842346191406	2	419.18354	836.352528	1.2906	0.000541	1.8069	0.00075742	3.0975	0.0012984	419.18302674583776	97.688	3.0434	98.079	96.039	99.082	0.39065					170	73	4	0	0	0	0.89962	1	11770	11770		38.806	3.6054	1	1212200			46163	8489	31023	31036	52150	52150					-0.07219446184228673
QSRAGIGK	8	Unmodified	_QSRAGIGK_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;ENST00000470074.1_1_2:160076105-160087520:+|nuORF	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7390441894531	2	408.737951	815.46135	-0.071529	-2.9237E-05	4.315	0.0017637	4.2434	0.0017344	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.81184	1	2063	2063		19.997	0.89325	1	1654100			46164	2816	31024	31037	52151	52151					0.04623764786060747
QSRLSLPSSVP	11	Unmodified	_QSRLSLPSSVP_					0	0	0			REV__ENST00000592072.1_1_17:40939341-40946077:+|nuORF	REV__ENST00000592072.1_1_17:40939341-40946077:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	585.8322143554688	2	585.827495	1169.64044	0.36546	0.0002141	4.4503	0.0026071	4.8158	0.0028212	585.8299498087534	57.741	1.3417	57.711	57.197	58.539	-0.029865					92	38	3	0	0	0	0.66929	1	5332	5332		36.447	2.5251	1	120850	+		46165	29207	31025	31038	52152	52152					0.06240184563466755
QSRLSLPSSVP	11	Unmodified	_QSRLSLPSSVP_					0	0	0			REV__ENST00000592072.1_1_17:40939341-40946077:+|nuORF	REV__ENST00000592072.1_1_17:40939341-40946077:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	585.83056640625	2	585.827495	1169.64044	0.49853	0.00029205	4.2519	0.0024909	4.7505	0.002783	585.8298665984416	57.52	1.1205	57.626	57.378	58.498	0.1055					94	54	2	0	0	0	0.7144	1	4884	4884		29.17	3.596	1	190780	+		46166	29207	31025	31038	52153	52153					0.06240184563466755
QSRQLAAPW	9	Unmodified	_QSRQLAAPW_					0	0	0			REV__ENSG00000205108|ENST00000378788|FAM205A	REV__ENSG00000205108|ENST00000378788|FAM205A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7841796875	2	528.78289	1055.55123	2.0369	0.0010771	0.4695	0.00024826	2.5064	0.0013254	528.7830016729833	97.738	1.3991	98.123	97.681	99.08	0.38548					98	33	4	0	0	0	0.76255	1	11731	11731		35.618	0	1	3308400	+		46167	23541	31026	31039	52154	52154					0.025673943945776045
QSRRERKPRGL	11	Unmodified	_QSRRERKPRGL_					0	0	0			REV__ENSG00000169551|ENST00000276241|CT55	REV__ENSG00000169551|ENST00000276241|CT55	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.5770263671875	3	461.607764	1381.80146	-1.495	-0.0006901	3.5139	0.001622	2.0189	0.00093193	461.60954687647677	30.201	0.48677	30.23	30.008	30.495	0.028618					24	10	3	0	0	0	0.17925	1	1954	1954		15.337	0	1	95274	+		46168	21584	31027	31040	52155	52155					0.12583371720074865
QSRTWVLSP	9	Unmodified	_QSRTWVLSP_					0	0	0			REV__ENST00000479578.5_1_1:110200431-110200590:+|nuORF	REV__ENST00000479578.5_1_1:110200431-110200590:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.2767944335938	2	537.290548	1072.56654	0.33483	0.0001799	3.6448	0.0019583	3.9796	0.0021382	537.2920771926106	24.265	0.66186	23.883	23.491	24.153	-0.38178					30	14	3	0	0	0	0.20789	1	1171	1171		30.318	0	1	128920	+		46169	27401	31028	31041	52156	52156					0.033162611917987306
QSRVKPEER	9	Unmodified	_QSRVKPEER_					0	0	0			REV__ENST00000455517.5_2_3:12330435-12330558:+|nuORF	REV__ENST00000455517.5_2_3:12330435-12330558:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.809814453125	2	564.809636	1127.60472	0.17109	9.6631E-05	1.304	0.0007365	1.4751	0.00083313	564.8102162208658	43.686	0.61086	43.635	43.309	43.92	-0.051613					23	14	2	0	0	0	0.33718	1	3028	3028		62.107	0.41614	1	390700	+		46170	26941	31029	31042	52157	52157					0.04602147106470511
QSSDWKIN	8	Unmodified	_QSSDWKIN_					0	0	0			REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|36|1|sense	REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|36|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.23675537109375	2	489.237981	976.461409	-2.6543	-0.0012986	-0.42131	-0.00020612	-3.0756	-0.0015047	489.2378098143177	63.789	1.3068	63.816	63.573	64.88	0.027142					83	36	4	0	0	0	0.89962	1	6040	6040		38.806	3.6541	1	723550	+		46171	29505	31030	31043	52158	52158					-0.02776280004616183
QSSSAKATPG	10	Unmodified	_QSSSAKATPG_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.23321533203125	2	467.235439	932.456324	-0.11758	-5.4936E-05	-4.1303	-0.0019298	-4.2478	-0.0019847	467.2333042677725	68.306	1.2873	68.328	67.991	69.278	0.021599					130	57	3	0	0	0	0.76096	1	6447	6447		41.427	6.2259	1	1529800			46172	6228	31031	31044	52159	52159					-0.012605838672357095
QSSSAKATPG	10	Unmodified	_QSSSAKATPG_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.2335205078125	2	467.235439	932.456324	-1.0422	-0.00048693	-3.449	-0.0016115	-4.4912	-0.0020984	467.23380164983837	67.827	1.4777	67.962	67.582	69.06	0.13521					154	58	4	0	0	0	0.60985	1	6094	6094		49.536	1.5765	1	2802800			46173	6228	31031	31044	52160	52160					-0.012605838672357095
QSSSAKATPG	10	Unmodified	_QSSSAKATPG_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.23333740234375	2	467.235439	932.456324	-1.0712	-0.00050052	-4.1563	-0.0019419	-5.2275	-0.0024425	467.2337815717814	69.637	1.4406	69.703	69.254	70.695	0.065506					156	70	4	0	0	0	0.76096	2	6263	6263;6278		41.427	3.6151	1	9146400			46174	6228	31031	31044	52161;52162	52161					-0.012605838672357095
QSTESNMSVPK	11	Unmodified	_QSTESNMSVPK_					0	0	0		nc|ENSG00000138468|Q9BQF6-3|SENP7;nc|ENSG00000138468|Q9BQF6-4|SENP7;nc|ENSG00000138468|Q9BQF6-5|SENP7;nc|ENSG00000138468|Q9BQF6-2|SENP7;ENSG00000138468|ENST00000394095|SENP7	nc|ENSG00000138468|Q9BQF6-3|SENP7	nc|ENSG00000138468|Q9BQF6-3|SENP7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.2124328613281	3	403.192294	1206.55505	-0.34105	-0.00013751	2.1024	0.00084766	1.7613	0.00071015	403.19319851269194	29.96	0.67765	29.917	29.555	30.233	-0.043095					30	14	3	0	0	0	0.16261	1	1563	1563		24.276	0	1	84314			46175	4300	31032	31045	52163	52163					-0.03996348684518125
QSTLKTVA	8	Unmodified	_QSTLKTVA_					0	0	0			REV__nc|ENSG00000081014|Q9UPM8-2|AP4E1	REV__nc|ENSG00000081014|Q9UPM8-2|AP4E1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.25030517578125	2	424.247818	846.481082	2.718	0.0011531	2.5033	0.001062	5.2214	0.0022152	424.24890535908264	107.33	0.96184	107.3	106.88	107.84	-0.034134					71	22	4	0	0	0	0.87922	1	11871	11871		31.955	2.8053	1	4480000	+		46176	16814	31033	31046	52164	52164					0.051700960061339174
QSTMAHFF	8	Unmodified	_QSTMAHFF_					0	0	0			REV__nc|ENSG00000143952|Q9P1Q0-4|VPS54	REV__nc|ENSG00000143952|Q9P1Q0-4|VPS54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7182312011719	2	484.71837	967.422187	-1.6647	-0.00080692	1.5426	0.00074774	-0.1221	-5.9183E-05	484.718975245025	98.748	4.2341	98.941	95.671	99.905	0.1928					171	98	2	0	0	0	0.88915	1	10295	10295		35.201	3.2459	1	437580	+		46177	19859	31034	31047	52165	52165					-0.06282703559838865
QSTSPNGTSAN	11	Unmodified	_QSTSPNGTSAN_					0	0	0			REV__ENSG00000105223|ENST00000409735|PLD3	REV__ENSG00000105223|ENST00000409735|PLD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.2373046875	2	532.236167	1062.45778	0.26072	0.00013877	2.9884	0.0015905	3.2491	0.0017293	532.2375023776897	39.934	0.69376	39.904	39.565	40.258	-0.03027					33	16	3	0	0	0	0.48313	1	2802	2802		53.089	3.5529	1	251430	+		46178	17515	31035	31048	52166	52166					-0.0709499456913818
QSTSPNGTSAN	11	Unmodified	_QSTSPNGTSAN_					0	0	0			REV__ENSG00000105223|ENST00000409735|PLD3	REV__ENSG00000105223|ENST00000409735|PLD3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	532.236167	1062.45778	-0.7	-0.00037257	4.0301	0.002145	3.3301	0.0017724	532.2381204164618	39.876	0.77567	39.833	39.45	40.226	-0.043694	-0.02004	0.00019515	NaN	53.089	41	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	279060	+		46179	17515	31035	31048							-0.0709499456913818
QSVAGRLLN	9	Unmodified	_QSVAGRLLN_					0	0	0			REV__ENST00000509573.5_1_5:138855949-138860944:-|nuORF	REV__ENST00000509573.5_1_5:138855949-138860944:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2789611816406	2	479.277441	956.540328	-0.097427	-4.6695E-05	0.75887	0.00036371	0.66144	0.00031701	479.2777564513445	97.555	2.08	97.612	96.988	99.068	0.056831					95	47	3	0	0	0	0.76764	1	10333	10333		34.173	0	1	964120	+		46180	22694	31036	31049	52167	52167					0.060319920203255606
QSVAGRLLN	9	Unmodified	_QSVAGRLLN_					0	0	0			REV__ENST00000509573.5_1_5:138855949-138860944:-|nuORF	REV__ENST00000509573.5_1_5:138855949-138860944:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27838134765625	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.79277	1	7669	7669		27.047	0.25122	1	1785900	+		46181	22694	31036	31049	52168	52168					0.060319920203255606
QSVLGQRVDL	10	Unmodified	_QSVLGQRVDL_					0	0	0		ENST00000485775.5_1_1:110582506-110596531:+|nuORF;nc|ENSG00000143093|Q5VSL9-2|STRIP1;ENSG00000143093|ENST00000369795|STRIP1	ENST00000485775.5_1_1:110582506-110596531:+|nuORF	ENST00000485775.5_1_1:110582506-110596531:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.7208251953125	2	557.814387	1113.61422	0.38831	0.0002166	3.2156	0.0017937	3.6039	0.0020103	557.8160919495899	53.239	0.95152	53.653	53.291	54.242	0.4139					47	22	4	0	0	0	0.37624	1	5380	5380		53.089	28.57	1	1249000			46182	4600	31037	31050	52169	52169					0.061959153919815435
QSVLGQRVDL	10	Unmodified	_QSVLGQRVDL_					0	0	0		ENST00000485775.5_1_1:110582506-110596531:+|nuORF;nc|ENSG00000143093|Q5VSL9-2|STRIP1;ENSG00000143093|ENST00000369795|STRIP1	ENST00000485775.5_1_1:110582506-110596531:+|nuORF	ENST00000485775.5_1_1:110582506-110596531:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.7210083007812	2	557.814387	1113.61422	-0.25205	-0.0001406	4.043	0.0022552	3.7909	0.0021146	557.8164922064349	52.983	0.70361	53.598	53.324	54.028	0.61436					46	16	4	0	0	0	0.37624	1	5384	5384		37.508	17.478	1	1381500			46183	4600	31037	31050	52170	52170					0.061959153919815435
QSVRLADSLPM	11	Unmodified	_QSVRLADSLPM_					0	0	0			REV__ENSG00000171487|ENST00000390649|NLRP5	REV__ENSG00000171487|ENST00000390649|NLRP5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2485046386719	3	406.216662	1215.62816	-1.1261	-0.00045743	0.25562	0.00010384	-0.87046	-0.00035359	406.21704952129346	87.891	0.16812	88.354	88.227	88.396	0.46311					5	3	2	0	0	0	0.17586	1	10372	10372		16.53	0	1	27528	+		46184	21735	31038	31051	52171	52171					0.028968248287583265
QSVSFLHGK	9	Unmodified	_QSVSFLHGK_					0	0	0		nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.77398681640625	2	501.771991	1001.52943	2.7001	0.0013548	0.75953	0.00038111	3.4596	0.0017359	501.77218039034597	25.294	1.0363	24.863	24.318	25.354	-0.4311					56	23	3	0	0	0	0.17181	1	1303	1303		79.713	7.8351	1	685650			46185	14976	31039	31052	52172	52172					0.028725896460514377
QSWLQIPRKKN	11	Unmodified	_QSWLQIPRKKN_					0	0	0		nc|ENSG00000137707|Q9NY30|BTG4;ENSG00000137707|ENST00000692032|BTG4	nc|ENSG00000137707|Q9NY30|BTG4	nc|ENSG00000137707|Q9NY30|BTG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.6082763671875	3	466.605249	1396.79392	2.578	0.0012029	3.3971	0.0015851	5.9751	0.002788	466.60668985200886	100.48	2.1594	100.43	99.202	101.36	-0.052116					162	50	4	0	0	0	0.75779	1	10945	10945		20.315	2.4819	1	531470			46186	4228	31040	31053	52173	52173					0.11139219399774447
QSWRLVVD	8	Unmodified	_QSWRLVVD_					0	0	0			REV__ENSG00000111644|ENST00000229243|ACRBP	REV__ENSG00000111644|ENST00000229243|ACRBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.7738342285156	2	501.771991	1001.52943	2.7001	0.0013548	0.75953	0.00038111	3.4596	0.0017359	501.77218039034597	25.294	1.0363	24.863	24.318	25.354	-0.4311					56	23	3	0	0	0	0.81485	1	1291	1291		62.107	1.9892	1	685650	+		46187	17879	31041	31054	52174	52174					0.028725896460514377
QSYQESLV	8	Unmodified	_QSYQESLV_					0	0	0			REV__nc|ENSG00000100106|Q9H2D6-3|TRIOBP;REV__ENSG00000133030|ENST00000651222|MPRIP	REV__ENSG00000133030|ENST00000651222|MPRIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	477.2347412109375	2	477.232364	952.450176	-0.2587	-0.00012346	0.35851	0.00017109	0.099808	4.7632E-05	477.232447667366	27.666	0.52666	27.627	27.305	27.832	-0.038523					29	12	3	0	0	0	0.92457	1	1358	1358		47.916	1.9434	1	76144	+		46188	19051;17139	31042	31055	52175	52175					-0.02795102098764346
QTAALRARV	9	Unmodified	_QTAALRARV_					0	0	0			REV__ENSG00000138050|ENST00000505747|THUMPD2	REV__ENSG00000138050|ENST00000505747|THUMPD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.2988586425781	2	493.298707	984.582862	0.076206	3.7592E-05	0.24241	0.00011958	0.31862	0.00015717	493.29854388353033	16.501	0.63078	16.014	15.821	16.452	-0.48718					22	13	2	0	0	0	0.38563	1	142	142		58.782	0.55203	1	494770	+		46189	19432	31043	31056	52176	52176					0.08995387148547707
QTAALRARV	9	Unmodified	_QTAALRARV_					0	0	0			REV__ENSG00000138050|ENST00000505747|THUMPD2	REV__ENSG00000138050|ENST00000505747|THUMPD2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	493.298707	984.582862	0.076206	3.7592E-05	0.24241	0.00011958	0.31862	0.00015717	493.29854388353033	16.501	0.63078	16.014	15.821	16.452	-0.48718	0.056367	0.0001044	NaN	58.782	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	494770	+		46190	19432	31043	31056							0.08995387148547707
QTADQLLAR	9	Unmodified	_QTADQLLAR_					0	0	0		ENSG00000135862|ENST00000258341|LAMC1;ENST00000495918.1_1_1:183103830-183107010:+|nuORF	ENSG00000135862|ENST00000258341|LAMC1	ENSG00000135862|ENST00000258341|LAMC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2795104980469	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.66686	1	8862	8862		42.864	5.0528	1	1814000			46191	4059	31044	31057	52177	52177					0.03911670812135526
QTAKDKMCS	9	Carbamidomethyl (C),Oxidation (M)	_QTAKDKM(Oxidation (M))C(Carbamidomethyl (C))S_	QTAKDKMC(1)S	QTAKDKM(1)CS	QTAKDKMC(60)S	QTAKDKM(60)CS	0	1	1			REV__ENST00000460897.1_1_7:8009428-8043764:+|nuORF	REV__ENST00000460897.1_1_7:8009428-8043764:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	542.7391967773438	2	542.741716	1083.46888	0.55296	0.00030012	-3.6489	-0.0019804	-3.096	-0.0016803	542.7395981445304	28.836	0.72158	28.796	28.394	29.116	-0.039907					49	23	3	0	0	0	0.36616	1	1471	1471		60.118	12.159	1	84710	+		46192	17612	31045	31058	52178	52178	228	253			-0.06951631790866486
QTALKPMPA	9	Oxidation (M)	_QTALKPM(Oxidation (M))PA_		QTALKPM(1)PA		QTALKPM(80)PA	0	0	1			REV__ENST00000423240.1_1_9:74622799-74623024:-|nuORF	REV__ENST00000423240.1_1_9:74622799-74623024:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.7608947753906	2	486.762778	971.511002	0.0078128	3.803E-06	-3.4757	-0.0016918	-3.4678	-0.001688	486.76094746193235	37.226	3.175	37.539	36.88	40.055	0.31312					217	77	4	0	0	0	0.17181	2	3046	3033;3046		79.713	11.398	1	1950900	+		46193	17600	31046	31059	52179;52180	52180		252			0.024107116798290917
QTALKPMPA	9	Oxidation (M)	_QTALKPM(Oxidation (M))PA_		QTALKPM(1)PA		QTALKPM(74)PA	0	0	1			REV__ENST00000423240.1_1_9:74622799-74623024:-|nuORF	REV__ENST00000423240.1_1_9:74622799-74623024:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.76104736328125	2	486.762778	971.511002	0.20856	0.00010152	-3.7	-0.001801	-3.4915	-0.0016995	486.76086709151963	37.199	3.1666	37.684	37.119	40.285	0.48581					216	76	4	0	0	0	0.19818	2	2989	2989;3037		74.255	15.473	1	2150800	+		46194	17600	31046	31059	52181;52182	52181		252			0.024107116798290917
QTALLLQPS	9	Unmodified	_QTALLLQPS_					0	0	0			REV__nc|ENSG00000168763|Q8NE01-2|CNNM3	REV__nc|ENSG00000168763|Q8NE01-2|CNNM3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.76116943359375	2	485.782025	969.549496	0.6017	0.0002923	-0.63581	-0.00030886	-0.034108	-1.6569E-05	485.7816708666908	37.18	0.78338	37.666	37.242	38.025	0.48581					31	18	4	0	0	0	0.20789	1	3037	3037		35.152	7.2698	1	163840	+		46195	21518	31047	31060	52183	52183					0.06350340586004677
QTALTLKQKLA	11	Unmodified	_QTALTLKQKLA_					0	0	0		ENSG00000172123|ENST00000304905|SLFN12	ENSG00000172123|ENST00000304905|SLFN12	ENSG00000172123|ENST00000304905|SLFN12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.9122314453125	3	405.587084	1213.73942	0.066072	2.6798E-05	0.012024	4.8769E-06	0.078096	3.1675E-05	405.5868986292677	30.931	0.60702	30.935	30.667	31.274	0.0037212					39	13	4	0	0	0	0.17368	1	2060	2060		28.577	3.4507	1	720320			46196	6744	31048	31061	52184	52184					0.14110207528369756
QTAPGQSH	8	Unmodified	_QTAPGQSH_					0	0	0			REV__ENST00000478000.5_1_7:939770-943776:-|nuORF	REV__ENST00000478000.5_1_7:939770-943776:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.194091796875	2	413.196116	824.37768	-1.8302	-0.00075625	-4.0037	-0.0016543	-5.834	-0.0024106	413.19437338858427	78.719	2.8895	78.846	78.411	81.3	0.12695					158	87	2	0	0	0	0.91982	1	7439	7439		45.972	3.5761	1	956620	+		46197	27370	31049	31062	52185	52185					-0.0415339138166928
QTAPGQSH	8	Unmodified	_QTAPGQSH_					0	0	0			REV__ENST00000478000.5_1_7:939770-943776:-|nuORF	REV__ENST00000478000.5_1_7:939770-943776:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.1938781738281	2	413.196116	824.37768	-1.6019	-0.00066191	-4.2995	-0.0017765	-5.9014	-0.0024384	413.19424248280797	78.75	3.0447	78.844	78.417	81.462	0.0942					181	92	2	0	0	0	0.87479	2	7410	7401;7410		35.618	2.8059	1	856750	+		46198	27370	31049	31062	52186;52187	52187					-0.0415339138166928
QTAQQNGDTP	10	Unmodified	_QTAQQNGDTP_					0	0	0		chr2:96364591-96365969|61|12.0|0.59|4.35|+|0|NCAPH,NCAPH|1	chr2:96364591-96365969|61|12.0|0.59|4.35|+|0|NCAPH,NCAPH|1	chr2:96364591-96365969|61|12.0|0.59|4.35|+|0|NCAPH,NCAPH|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.240966796875	2	530.238709	1058.46287	-0.033627	-1.783E-05	4.3792	0.002322	4.3455	0.0023042	530.240968765566	111.53	2.3024	111.47	110.12	112.42	-0.059937					158	81	3	0	0	0	0.82886	1	12160	12160		37.812	0	1	182550			46199	354	31050	31063	52188	52188					-0.06402690706499925
QTARHRHLIE	10	Unmodified	_QTARHRHLIE_					0	0	0		nc|ENSG00000009765|Q6PHW0-6|IYD;nc|ENSG00000009765|Q6PHW0-5|IYD;nc|ENSG00000009765|Q6PHW0-4|IYD	nc|ENSG00000009765|Q6PHW0-6|IYD	nc|ENSG00000009765|Q6PHW0-6|IYD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	630.8489379882812	2	630.849627	1259.6847	2.2532	0.0014214	-2.7042	-0.0017059	-0.45104	-0.00028454	630.8477428055293	110.22	0.49098	110.27	110.09	110.58	0.054062					43	16	4	0	0	0	0.86471	1	13332	13332		30.318	2.4355	1	2854200			46200	14738	31051	31064	52189	52189					0.06524633500316668
QTATILLD	8	Unmodified	_QTATILLD_					0	0	0			REV__nc|ENSG00000162843|B1ANS9-2|WDR64	REV__nc|ENSG00000162843|B1ANS9-2|WDR64	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7716064453125	2	437.74765	873.480748	-0.98078	-0.00042933	3.7478	0.0016406	2.767	0.0012113	437.7493533364963	38.836	0.75101	39.178	38.737	39.488	0.34187					33	17	3	0	0	0	0.4196	1	3159	3159		19.997	9.1312	1	405560	+		46201	20854	31052	31065	52190	52190					0.03894676286279264
QTAVKTVEERG	11	Unmodified	_QTAVKTVEERG_					0	0	0			REV__ENSG00000152093|ENST00000281882|CFC1B	REV__ENSG00000152093|ENST00000281882|CFC1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7843322753906	3	406.554331	1216.64116	1.6494	0.00067058	3.0529	0.0012412	4.7023	0.0019118	406.5554517143818	34.399	0.65912	34.609	34.319	34.978	0.21002					36	15	3	0	0	0	0.17302	1	2589	2589		33.039	12.202	1	542030	+		46202	19328	31053	31066	52191	52191					0.04150979212522543
QTAVPELKLLC	11	Unmodified	_QTAVPELKLLC_					0	0	0		nc|ENSG00000163864|Q96T66-3|NMNAT3	nc|ENSG00000163864|Q96T66-3|NMNAT3	nc|ENSG00000163864|Q96T66-3|NMNAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.564453125	3	405.565291	1213.67404	-0.19603	-7.9504E-05	-1.2042	-0.00048838	-1.4002	-0.00056788	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.74405	1	6041	6041		23.378	0.81632	1	328790			46203	15052	31054	31067	52192	52192					0.0757547001101102
QTAVPELKLLC	11	Unmodified	_QTAVPELKLLC_					0	0	0		nc|ENSG00000163864|Q96T66-3|NMNAT3	nc|ENSG00000163864|Q96T66-3|NMNAT3	nc|ENSG00000163864|Q96T66-3|NMNAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.56268310546875	3	405.565291	1213.67404	0.37514	0.00015214	-2.1837	-0.00088564	-1.8086	-0.0007335	405.8987384717414	61.089	0.62099	61.208	60.689	61.31	0.11901					42	26	2	0	0	0	0.72892	1	5317	5317		26.75	6.4347	1	745630			46204	15052	31054	31067	52193	52193					0.0757547001101102
QTCGRLLLAK	10	Unmodified	_QTCGRLLLAK_					0	0	0			REV__ENST00000492662.1_1_3:33414533-33415354:+|nuORF	REV__ENST00000492662.1_1_3:33414533-33415354:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	551.8204956054688	2	551.823701	1101.63285	0.15877	8.7612E-05	-3.8592	-0.0021296	-3.7005	-0.002042	551.8215735464796	40.092	0.66222	40.098	39.831	40.493	0.0065041					34	17	3	0	0	0	0.60985	1	2503	2503		49.536	8.9634	1	333190	+		46205	20351	31055	31068	52194	52194					0.08609753762220862
QTCHAASH	8	Unmodified	_QTCHAASH_					0	0	0			REV__ENST00000594624.6_1_19:43156221-43156347:+|nuORF	REV__ENST00000594624.6_1_19:43156221-43156347:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.6829528808594	2	427.682319	853.350085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.69	1	102.99	102.49	103.49	0.29865								0	0	0	0.30045	1	12519	12519		40.573	1.7665	1		+		46206	29237	31056	31069	52195	52195					-0.0824561791355336
QTCPKKIP	8	Unmodified	_QTCPKKIP_					0	0	0			REV__L1MB7_dup901|chr1:110945925-110946522:+|1.120968765350959|0.2621707466060082|2.1|63.0|11|2|sense	REV__L1MB7_dup901|chr1:110945925-110946522:+|1.120968765350959|0.2621707466060082|2.1|63.0|11|2|sense	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7628173828125	2	457.760038	913.505523	-1.9356	-0.00088604	-0.8464	-0.00038745	-2.782	-0.0012735	457.75927770355077	34.963	0.37376	34.963	34.692	35.066	0					12	10	2	0	0	0	0.4196	1	1888	1888		11.511	3.8207	1	23149	+		46207	29525	31057	31070	52196	52196					0.04531032888007758
QTCPKKIP	8	Unmodified	_QTCPKKIP_					0	0	0			REV__L1MB7_dup901|chr1:110945925-110946522:+|1.120968765350959|0.2621707466060082|2.1|63.0|11|2|sense	REV__L1MB7_dup901|chr1:110945925-110946522:+|1.120968765350959|0.2621707466060082|2.1|63.0|11|2|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	457.760038	913.505523	-0.63522	-0.00029078	-3.2224	-0.0014751	-3.8577	-0.0017659	457.7583800796931	35.126	0.75282	35.069	34.632	35.384	-0.056385	0.056623	-0.00046934	NaN	11.511	26	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44598	+		46208	29525	31057	31070							0.04531032888007758
QTCPKKIP	8	Unmodified	_QTCPKKIP_					0	0	0			REV__L1MB7_dup901|chr1:110945925-110946522:+|1.120968765350959|0.2621707466060082|2.1|63.0|11|2|sense	REV__L1MB7_dup901|chr1:110945925-110946522:+|1.120968765350959|0.2621707466060082|2.1|63.0|11|2|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	457.760038	913.505523	-0.73953	-0.00033853	-2.4405	-0.0011172	-3.1801	-0.0014557	457.7587955192235	34.999	0.39644	35.005	34.695	35.091	0.0063934	-0.0072213	0.0002465	NaN	11.511	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39340	+		46209	29525	31057	31070							0.04531032888007758
QTDAEEVR	8	Unmodified	_QTDAEEVR_					0	0	0			REV__nc|ENSG00000132677|Q9H310-4|RHBG	REV__nc|ENSG00000132677|Q9H310-4|RHBG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	474.2219543457031	2	474.225071	946.435589	-0.93694	-0.00044432	-3.9395	-0.0018682	-4.8764	-0.0023125	474.2235736809941	68.894	0.63741	69.03	68.782	69.419	0.13521					61	28	3	0	0	0	0.82658	1	6230	6230		21.96	2.5999	1	348720	+		46210	19020	31058	31071	52197	52197					-0.039771742468929006
QTDGVLLE	8	Unmodified	_QTDGVLLE_					0	0	0			REV__nc|ENSG00000100490|Q00532-3|CDKL1	REV__nc|ENSG00000100490|Q00532-3|CDKL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2315979003906	2	437.729458	873.444362	0.48198	0.00021098	0.13299	5.8214E-05	0.61497	0.00026919	437.7294765331459	26.126	0.69964	26.172	25.815	26.515	0.045509					43	19	4	0	0	0	0.89494	1	1049	1049		37.159	8.9048	1	121760	+		46211	17198	31059	31072	52198	52198					0.002577993895670261
QTDIQGALSAY	11	Unmodified	_QTDIQGALSAY_					0	0	0		ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.7882690429688	2	583.788035	1165.56152	-0.81056	-0.00047319	1.0374	0.00060561	0.22681	0.00013241	583.7884299477995	68.187	0.58757	68.209	67.93	68.517	0.021599					66	27	3	0	0	0	0.34641	4	6427	6418;6427;6436;6443		63.534	12.198	1	469790			46212	8317	31060	31073	52199;52200;52201;52202	52200					-0.014640874614769928
QTDIQGALSAY	11	Unmodified	_QTDIQGALSAY_					0	0	0		ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.7877807617188	2	583.788035	1165.56152	-0.18074	-0.00010551	0.49289	0.00028774	0.31215	0.00018223	583.7881372408947	68.118	0.63609	68.082	67.798	68.434	-0.036301					59	24	3	0	0	0	0.1181	4	6556	6548;6556;6564;6573		89.029	36.092	1	436950			46213	8317	31060	31073	52203;52204;52205;52206	52204					-0.014640874614769928
QTDIQGALSAY	11	Unmodified	_QTDIQGALSAY_					0	0	0		ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.7880249023438	2	583.788035	1165.56152	-1.3585	-0.00079305	1.4279	0.00083359	0.06944	4.0538E-05	583.7888412815615	68.005	0.64187	68.035	67.72	68.362	0.030571					70	25	4	0	0	0	0.14207	5	6465	6458;6465;6473;6490;6503		82.831	36.858	1	528690			46214	8317	31060	31073	52207;52208;52209;52210;52211	52208					-0.014640874614769928
QTDIQGALSAY	11	Unmodified	_QTDIQGALSAY_					0	0	0		ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	ENSG00000198730|ENST00000361367|CTR9	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	583.788035	1165.56152	-0.63701	-0.00037188	1.9045	0.0011118	1.2675	0.00073995	584.2909840435129	68.105	0.28504	68.164	68.071	68.356	0.059288	0.041711	0.0010033	NaN	89.029	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44513			46215	8317	31060	31073							-0.014640874614769928
QTDKLKELY	9	Unmodified	_QTDKLKELY_					0	0	0		nc|ENSG00000174780|O76094-2|SRP72;ENSG00000174780|ENST00000642900|SRP72	nc|ENSG00000174780|O76094-2|SRP72	nc|ENSG00000174780|O76094-2|SRP72	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.3118896484375	2	569.311146	1136.60774	-0.94718	-0.00053924	0.76495	0.0004355	-0.18223	-0.00010375	569.3115545509793	38.534	0.81402	38.506	38.129	38.943	-0.027843					38	18	3	0	0	0	0.51307	1	2620	2620		51.335	6.9583	1	169460			46216	6962	31061	31074	52212	52212					0.04489977440630355
QTDLLRSR	8	Unmodified	_QTDLLRSR_					0	0	0			REV__nc|ENSG00000163322|Q6UWZ7-2|ABRAXAS1	REV__nc|ENSG00000163322|Q6UWZ7-2|ABRAXAS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7802734375	2	494.780348	987.546142	-0.074951	-3.7084E-05	0.21159	0.00010469	0.13664	6.7607E-05	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.87064	1	8845	8845		29.15	0	1	651380	+		46217	20898	31062	31075	52213	52213					0.05187090532001548
QTDQIINHPVG	11	Unmodified	_QTDQIINHPVG_					0	0	0			REV__nc|ENSG00000290611|Q6ZSU1|CYP2G1P	REV__nc|ENSG00000290611|Q6ZSU1|CYP2G1P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3143310546875	2	611.314751	1220.61495	0.21013	0.00012846	-0.33209	-0.00020301	-0.12196	-7.4556E-05	611.3143606428133	110.46	0.80772	110.49	110.3	111.1	0.031738					40	22	3	0	0	0	0.7144	1	12092	12092		29.17	0	1	317240	+		46218	30294	31063	31076	52214	52214					0.01346710041048027
QTEHCVHL	8	Unmodified	_QTEHCVHL_					0	0	0		nc|ENSG00000115970|Q6YHU6-4|THADA;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;ENSG00000115970|ENST00000405975|THADA;ENST00000485018.1_1_2:43519181-43520149:-|nuORF	nc|ENSG00000115970|Q6YHU6-4|THADA	nc|ENSG00000115970|Q6YHU6-4|THADA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.72808837890625	2	483.726726	965.4389	-0.17344	-8.3898E-05	4.2936	0.0020769	4.1201	0.001993	483.7285884211748	74.404	1.2386	74.795	74.5	75.738	0.39111					50	29	3	0	0	0	0.89494	1	8401	8401		37.159	5.2042	1	561290			46219	2888	31064	31077	52215	52215					-0.045202026738934364
QTEKHVVLCV	10	Unmodified	_QTEKHVVLCV_					0	0	0		nc|ENSG00000162687|Q6UVM3-4|KCNT2;ENST00000610076.1_1_1:196227273-196577439:-|nuORF;nc|ENSG00000162687|Q6UVM3-3|KCNT2;nc|ENSG00000162687|Q6UVM3-2|KCNT2;ENSG00000162687|ENST00000294725|KCNT2;ENST00000498426.5_1_1:196286396-196434478:-|nuORF;nc|ENSG00000107147|Q5JUK3-4|KCNT1;nc|ENSG00000107147|Q5JUK3|KCNT1;ENSG00000107147|ENST00000371757|KCNT1;nc|ENSG00000107147|Q5JUK3-2|KCNT1	nc|ENSG00000162687|Q6UVM3-4|KCNT2	nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.310546875	2	578.313166	1154.61178	-0.30541	-0.00017662	-4.1751	-0.0024145	-4.4805	-0.0025911	578.3105993918314	110.37	1.6265	110.37	110.02	111.65	0					155	51	5	0	0	0	0.86452	1	11482	11482		30.504	2.6214	1	2787700			46220	5716	31065	31078	52216	52216					0.04065743662681598
QTEKHVVLCV	10	Unmodified	_QTEKHVVLCV_					0	0	0		nc|ENSG00000162687|Q6UVM3-4|KCNT2;ENST00000610076.1_1_1:196227273-196577439:-|nuORF;nc|ENSG00000162687|Q6UVM3-3|KCNT2;nc|ENSG00000162687|Q6UVM3-2|KCNT2;ENSG00000162687|ENST00000294725|KCNT2;ENST00000498426.5_1_1:196286396-196434478:-|nuORF;nc|ENSG00000107147|Q5JUK3-4|KCNT1;nc|ENSG00000107147|Q5JUK3|KCNT1;ENSG00000107147|ENST00000371757|KCNT1;nc|ENSG00000107147|Q5JUK3-2|KCNT1	nc|ENSG00000162687|Q6UVM3-4|KCNT2	nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.310302734375	2	578.313166	1154.61178	-0.93812	-0.00054253	-3.5765	-0.0020683	-4.5146	-0.0026108	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.86718	1	12034	12034		27.882	3.3631	1	3649700			46221	5716	31065	31078	52217	52217					0.04065743662681598
QTEKQSTGVY	10	Unmodified	_QTEKQSTGVY_					0	0	0		nc|ENSG00000163431|P29536-2|LMOD1;ENSG00000163431|ENST00000367288|LMOD1	nc|ENSG00000163431|P29536-2|LMOD1	nc|ENSG00000163431|P29536-2|LMOD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.7803344726562	2	570.78021	1139.54587	1.1603	0.00066225	-1.0197	-0.000582	0.1406	8.0251E-05	570.7794700070763	24.905	0.78845	24.868	24.536	25.325	-0.037178					40	18	3	0	0	0	0.8545	1	943	943		36.447	0.82846	1	146700			46222	5797	31066	31079	52218	52218					-0.0183237397850462
QTELLKALH	9	Unmodified	_QTELLKALH_					0	0	0			REV__nc|ENSG00000163808|Q9NS87-4|KIF15	REV__nc|ENSG00000163808|Q9NS87-4|KIF15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.8087158203125	2	526.808574	1051.60259	-0.10527	-5.5459E-05	-1.3143	-0.0006924	-1.4196	-0.00074786	526.8075985378076	98.641	0.66186	98.868	98.39	99.052	0.2269					35	14	3	0	0	0	0.41566	1	10224	10224		56.721	4.4219	1	911130	+		46223	20974	31067	31080	52219	52219					0.07885718368675043
QTELLKALH	9	Unmodified	_QTELLKALH_					0	0	0			REV__nc|ENSG00000163808|Q9NS87-4|KIF15	REV__nc|ENSG00000163808|Q9NS87-4|KIF15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.8082885742188	2	526.808574	1051.60259	-0.10054	-5.2966E-05	-0.84901	-0.00044727	-0.94955	-0.00050023	526.80805153199	100.65	1.7806	100.86	100.42	102.2	0.21511					97	42	4	0	0	0	0.47272	1	10557	10557		53.351	2.016	1	2744500	+		46224	20974	31067	31080	52220	52220					0.07885718368675043
QTELLKALH	9	Unmodified	_QTELLKALH_					0	0	0			REV__nc|ENSG00000163808|Q9NS87-4|KIF15	REV__nc|ENSG00000163808|Q9NS87-4|KIF15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.808837890625	2	526.808574	1051.60259	-1.5277	-0.0008048	0.10281	5.4159E-05	-1.4249	-0.00075064	526.8083649292871	98.814	0.65662	99	98.5	99.157	0.18582					32	14	3	0	0	0	0.58668	1	10186	10186		47.657	5.1829	1	791290	+		46225	20974	31067	31080	52221	52221					0.07885718368675043
QTELLKALH	9	Unmodified	_QTELLKALH_					0	0	0			REV__nc|ENSG00000163808|Q9NS87-4|KIF15	REV__nc|ENSG00000163808|Q9NS87-4|KIF15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8082275390625	2	526.808574	1051.60259	2.0771	0.0010942	-3.8443	-0.0020252	-1.7672	-0.00093099	526.8065947880607	99.033	1.2732	99.395	98.525	99.798	0.36137					108	31	5	0	0	0	0.10807	3	11848	11839;11848;11872		90.777	31.995	1	32054000	+		46226	20974	31067	31080	52222;52223;52224	52223					0.07885718368675043
QTELLKALH	9	Unmodified	_QTELLKALH_					0	0	0			REV__nc|ENSG00000163808|Q9NS87-4|KIF15	REV__nc|ENSG00000163808|Q9NS87-4|KIF15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8076171875	2	526.808574	1051.60259	2.1591	0.0011374	-4.2531	-0.0022406	-2.0941	-0.0011032	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.6204	2	12467	12346;12467		45.972	3.5761	1	36320000	+		46227	20974	31067	31080	52225;52226	52226					0.07885718368675043
QTELLKALH	9	Unmodified	_QTELLKALH_					0	0	0			REV__nc|ENSG00000163808|Q9NS87-4|KIF15	REV__nc|ENSG00000163808|Q9NS87-4|KIF15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8077392578125	2	526.808574	1051.60259	1.8843	0.00099267	-3.7441	-0.0019724	-1.8598	-0.00097976	526.806675241247	99.062	1.2342	99.425	98.602	99.837	0.36292					102	30	5	0	0	0	0.22631	3	11934	11890;11911;11934		71.296	10.324	1	32274000	+		46228	20974	31067	31080	52227;52228;52229	52229					0.07885718368675043
QTEMYRILK	9	Unmodified	_QTEMYRILK_					0	0	0		ENST00000439706.5_1_12:46582621-46582756:-|nuORF	ENST00000439706.5_1_12:46582621-46582756:-|nuORF	ENST00000439706.5_1_12:46582621-46582756:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	591.3182983398438	2	591.320991	1180.62743	0.11826	6.9931E-05	-1.9672	-0.0011633	-1.8489	-0.0010933	591.3195203707345	66.847	0.7553	66.811	66.494	67.25	-0.035698					74	33	3	0	0	0	0.33718	1	6417	6417		62.107	10.772	1	235530			46229	11764	31068	31081	52230	52230					0.04434030179709225
QTEMYRILK	9	Unmodified	_QTEMYRILK_					0	0	0		ENST00000439706.5_1_12:46582621-46582756:-|nuORF	ENST00000439706.5_1_12:46582621-46582756:-|nuORF	ENST00000439706.5_1_12:46582621-46582756:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	591.320991	1180.62743	-0.76242	-0.00045083	-1.2682	-0.0007499	-2.0306	-0.0012007	591.3202759040194	67.03	0.67344	67.03	66.818	67.491	0	0.15751	7.815E-05	NaN	62.107	58	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136820			46230	11764	31068	31081							0.04434030179709225
QTEMYRILK	9	Unmodified	_QTEMYRILK_					0	0	0		ENST00000439706.5_1_12:46582621-46582756:-|nuORF	ENST00000439706.5_1_12:46582621-46582756:-|nuORF	ENST00000439706.5_1_12:46582621-46582756:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	591.320991	1180.62743	0.79077	0.0004676	-2.0931	-0.0012377	-1.3023	-0.00077009	591.3198402480059	66.678	0.70819	66.811	66.547	67.255	0.13326	-0.061316	-0.00089744	NaN	62.107	57	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	304310			46231	11764	31068	31081							0.04434030179709225
QTENSNVKY	9	Unmodified	_QTENSNVKY_					0	0	0			REV__ENST00000529267.2_1_14:70712472-70713909:-|nuORF	REV__ENST00000529267.2_1_14:70712472-70713909:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.7615356445312	2	541.759278	1081.504	-0.0037188	-2.0147E-06	4.2162	0.0022841	4.2124	0.0022821	541.761386790069	51.891	0.65078	52.558	52.23	52.881	0.6673					29	15	3	0	0	0	0.12652	1	5205	5205		87.754	5.5138	1	1214000	+		46232	28264	31069	31082	52231	52231					-0.033489296670495605
QTETKTITY	9	Unmodified	_QTETKTITY_					0	0	0		ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2	ENST00000452150.6_1_6:131179278-131188835:-|nuORF	ENST00000452150.6_1_6:131179278-131188835:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	542.779052734375	2	542.779679	1083.5448	-0.20343	-0.00011042	0.21327	0.00011576	0.0098399	5.3409E-06	542.7796400144206	34.431	0.88705	34.427	34.044	34.931	-0.0047417					51	21	4	0	0	0	0.15708	3	2068	2050;2068;2088		82.75	10.915	1	360540			46233	1429	31070	31083	52232;52233;52234	52233					0.0063741165256487875
QTETKTITY	9	Unmodified	_QTETKTITY_					0	0	0		ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2	ENST00000452150.6_1_6:131179278-131188835:-|nuORF	ENST00000452150.6_1_6:131179278-131188835:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	542.7793579101562	2	542.779679	1083.5448	0.29053	0.00015769	-0.39798	-0.00021602	-0.10746	-5.8326E-05	542.7793490020276	34.494	0.71979	34.438	34.09	34.81	-0.056381					46	15	4	0	0	0	0.17181	4	2164	2153;2164;2176;2188		79.713	17.605	1	511340			46234	1429	31070	31083	52235;52236;52237;52238	52236					0.0063741165256487875
QTETKTITY	9	Unmodified	_QTETKTITY_					0	0	0		ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2	ENST00000452150.6_1_6:131179278-131188835:-|nuORF	ENST00000452150.6_1_6:131179278-131188835:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	542.7794799804688	2	542.779679	1083.5448	-0.23421	-0.00012713	0.29518	0.00016022	0.060971	3.3094E-05	542.779695824281	34.398	0.83688	34.401	34.057	34.894	0.0026054					54	19	4	0	0	0	0.026116	2	2087	2087;2098		120.87	51.241	1	451720			46235	1429	31070	31083	52239;52240	52239					0.0063741165256487875
QTFSRIQT	8	Unmodified	_QTFSRIQT_					0	0	0		ENST00000486793.5_1_6:1624406-1626408:-|nuORF	ENST00000486793.5_1_6:1624406-1626408:-|nuORF	ENST00000486793.5_1_6:1624406-1626408:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.7618408203125	2	490.761623	979.508694	-0.27625	-0.00013557	0.46708	0.00022923	0.19083	9.3654E-05	490.76161664802436	19.481	0.56101	19.407	19.198	19.759	-0.073702					25	15	3	0	0	0	0.90837	1	436	436		56.721	1.2168	1	49076			46236	12586	31071	31084	52241	52241					0.01811999266362818
QTGDLILV	8	Unmodified	_QTGDLILV_					0	0	0		nc|ENSG00000144152|Q53RD9-4|FBLN7;nc|ENSG00000144152|Q53RD9-3|FBLN7;nc|ENSG00000144152|Q53RD9-2|FBLN7;ENSG00000144152|ENST00000331203|FBLN7	nc|ENSG00000144152|Q53RD9-4|FBLN7	nc|ENSG00000144152|Q53RD9-4|FBLN7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.7483825683594	2	429.750193	857.485833	-1.7334	-0.00074493	0.77902	0.00033479	-0.95437	-0.00041014	429.7503701051042	40.361	2.4974	40.367	40.029	42.526	0.0065002					186	77	3	0	0	0	0.91472	1	2601	2601		44.117	8.9161	1	3826800			46237	4694	31072	31085	52242	52242					0.05138980148922201
QTGDLILV	8	Unmodified	_QTGDLILV_					0	0	0		nc|ENSG00000144152|Q53RD9-4|FBLN7;nc|ENSG00000144152|Q53RD9-3|FBLN7;nc|ENSG00000144152|Q53RD9-2|FBLN7;ENSG00000144152|ENST00000331203|FBLN7	nc|ENSG00000144152|Q53RD9-4|FBLN7	nc|ENSG00000144152|Q53RD9-4|FBLN7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.75030517578125	2	429.750193	857.485833	0.14732	6.3313E-05	0.46597	0.00020025	0.6133	0.00026357	429.7502450669041	35.27	2.574	35.376	35.139	37.713	0.10604					195	79	3	0	0	0	0.92457	1	1902	1902		47.916	0	1	1419900			46238	4694	31072	31085	52243	52243					0.05138980148922201
QTGDLILV	8	Unmodified	_QTGDLILV_					0	0	0		nc|ENSG00000144152|Q53RD9-4|FBLN7;nc|ENSG00000144152|Q53RD9-3|FBLN7;nc|ENSG00000144152|Q53RD9-2|FBLN7;ENSG00000144152|ENST00000331203|FBLN7	nc|ENSG00000144152|Q53RD9-4|FBLN7	nc|ENSG00000144152|Q53RD9-4|FBLN7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.7498779296875	2	429.750193	857.485833	0.19062	8.192E-05	-1.2633	-0.00054292	-1.0727	-0.000461	429.7494836550346	40.163	2.386	40.244	39.962	42.348	0.081345					177	71	3	0	0	0	0.87259	1	2533	2533		58.782	10.866	1	3979000			46239	4694	31072	31085	52244	52244					0.05138980148922201
QTGEVVII	8	Unmodified	_QTGEVVII_					0	0	0		ENST00000491414.5_1_2:27715265-27717055:-|nuORF;ENSG00000115226|ENST00000264703|FNDC4	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7498779296875	2	429.750193	857.485833	-1.2651	-0.00054369	0.44911	0.000193	-0.81601	-0.00035068	429.7502304021701	40.953	2.5169	41.587	40.841	43.358	0.6339					165	67	3	0	0	0	0.884	2	3458	3458;3628		53.351	10.877	1	8697100			46240	2820	31073	31086	52245;52246	52245					0.05138980148910832
QTGLGFRTIQ	10	Unmodified	_QTGLGFRTIQ_					0	0	0			REV__ENSG00000171451|ENST00000310045|DSEL	REV__ENSG00000171451|ENST00000310045|DSEL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.808349609375	2	560.809105	1119.60366	0.54768	0.00030714	-0.38928	-0.00021831	0.1584	8.883E-05	560.8087603082379	31.413	0.94127	31.505	31.19	32.131	0.092003					46	21	4	0	0	0	0.099622	1	2140	2140		101.25	1.8777	1	1176700	+		46241	21729	31074	31087	52247	52247					0.04863932737566756
QTGPIRDRHK	10	Unmodified	_QTGPIRDRHK_					0	0	0			REV__ENST00000515378.5_1_4:2256939-2263707:-|nuORF	REV__ENST00000515378.5_1_4:2256939-2263707:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.2129211425781	3	403.226661	1206.65815	1.7985	0.00072522	1.1705	0.00047199	2.9691	0.0011972	403.22699285172143	33.662	0.70968	33.832	33.526	34.236	0.16971					26	16	4	0	0	0	0.37624	1	2398	2398		5.6988	0	1	199870	+		46242	28030	31075	31088	52248	52248					0.06308944608986167
QTGTASPVEFL	11	Unmodified	_QTGTASPVEFL_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000007174|ENST00000262442|DNAH9;ENST00000581682.1_1_17:11787806-11828539:+|nuORF;nc|ENSG00000007174|Q9NYC9-3|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2923583984375	2	575.292953	1148.57135	-0.40049	-0.0002304	-0.96308	-0.00055405	-1.3636	-0.00078445	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.41466	1	8619	8619		58.23	5.2932	1	1396200			46243	720	31076	31089	52249	52249					0.003011005439020664
QTGVIPWA	8	Unmodified	_QTGVIPWA_					0	0	0			REV__chr2:189469439-189469832|42|21.57|0.86|4.65|+|0|TE_info:L2c,L2c_dup23996,L2,LINE,acceptor,+,189469832,189469943|WDR75,None|2	REV__chr2:189469439-189469832|42|21.57|0.86|4.65|+|0|TE_info:L2c,L2c_dup23996,L2,LINE,acceptor,+,189469832,189469943|WDR75,None|2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77374267578125	2	436.237253	870.459953	-1.6402	-0.00071552	4.1022	0.0017895	2.462	0.001074	436.23934944077655	26.461	0.11311	26.528	26.481	26.594	0.066877					7	5	2	0	0	0	0.4196	1	1004	1004		18.324	0	1	19781	+		46244	15747	31077	31090	52250	52250					0.019541306972655548
QTHFFPRGPH	10	Unmodified	_QTHFFPRGPH_					0	0	0			REV__ENSG00000112144|ENST00000676107|CILK1	REV__ENSG00000112144|ENST00000676107|CILK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.3282470703125	2	612.307064	1222.59957	0.23366	0.00014307	1.876	0.0011487	2.1097	0.0012918	612.3080861048256	76.23	0.58765	76.799	76.474	77.062	0.56836					24	14	2	0	0	0	0.37624	1	8649	8649		23.523	7.0495	1	117060	+		46245	17918	31078	31091	52251	52251					-0.002821119654981885
QTHFPKRPQ	9	Unmodified	_QTHFPKRPQ_					0	0	0		ENST00000310924.6_1_17:77914006-77914372:-|nuORF	ENST00000310924.6_1_17:77914006-77914372:-|nuORF	ENST00000310924.6_1_17:77914006-77914372:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.8085327148438	2	569.809439	1137.60433	-0.80528	-0.00045885	-0.28422	-0.00016195	-1.0895	-0.00062081	569.8092195262177	29.033	0.82348	29.003	28.693	29.517	-0.029207					42	18	4	0	0	0	0.30689	1	1797	1797		64.207	4.089	1	606530			46246	9915	31079	31092	52252	52252					0.04102772177270708
QTHKASLI	8	Unmodified	_QTHKASLI_					0	0	0			REV__chr1:156310689-156312041|14|72.29|0.27|8.07|-|0|CCT3,CCT3|1	REV__chr1:156310689-156312041|14|72.29|0.27|8.07|-|0|CCT3,CCT3|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2605895996094	2	449.261259	896.507966	-1.2373	-0.00055589	-0.66295	-0.00029784	-1.9003	-0.00085373	449.2607756731413	72.678	0.71947	72.758	72.438	73.158	0.080032					44	25	2	0	0	0	0.81548	1	6657	6657		20.482	0	1	208410	+		46247	15418	31080	31093	52253	52253					0.055572046173210765
QTHKRKELIR	10	Unmodified	_QTHKRKELIR_					0	0	0			REV__ENSG00000095539|ENST00000210633|SEMA4G	REV__ENSG00000095539|ENST00000210633|SEMA4G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.93365478515625	3	436.933477	1307.7786	0.27454	0.00011996	0.84307	0.00036836	1.1176	0.00048832	436.9337888157145	20.681	2.5222	20.051	19.49	22.012	-0.62961					153	62	4	0	0	0	0.85485	2	729	729;750		23.378	4.8469	1	646260	+		46248	17060	31081	31094	52254;52255	52254					0.13702352602581414
QTHLNSGV	8	Unmodified	_QTHLNSGV_					0	0	0		ENST00000547751.5_1_12:45059243-45269664:-|nuORF;chr12:44875353-44875507|39|14.69|0.69|4.4|-|ENST00000551601|NELL2,NELL2;nc|ENSG00000184613|Q99435-4|NELL2;ENSG00000184613|ENST00000429094|NELL2;nc|ENSG00000184613|Q99435-2|NELL2;nc|ENSG00000184613|Q99435-3|NELL2	ENST00000547751.5_1_12:45059243-45269664:-|nuORF	ENST00000547751.5_1_12:45059243-45269664:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.30279541015625	2	428.219591	854.42463	-0.68486	-0.00029327	0.52509	0.00022485	-0.15977	-6.8417E-05	428.219567594064	68.279	0.38168	68.242	67.974	68.356	-0.036301					14	13	2	0	0	0	0.4196	1	6577	6577		29.15	0	1	26474			46249	129	31082	31095	52256	52256					-0.008405318305221954
QTHLQVLPP	9	Unmodified	_QTHLQVLPP_					0	0	0		ENST00000435680.5_1_15:31283038-31283785:-|nuORF	ENST00000435680.5_1_15:31283038-31283785:-|nuORF	ENST00000435680.5_1_15:31283038-31283785:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.793701171875	2	516.795466	1031.57638	-0.83709	-0.0004326	-3.0347	-0.0015683	-3.8718	-0.0020009	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.78058	1	8500	8500		30.504	3.8107	1	490270			46250	11714	31083	31096	52257	52257					0.06185449197187154
QTHLQVLPP	9	Unmodified	_QTHLQVLPP_					0	0	0		ENST00000435680.5_1_15:31283038-31283785:-|nuORF	ENST00000435680.5_1_15:31283038-31283785:-|nuORF	ENST00000435680.5_1_15:31283038-31283785:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7933349609375	2	516.795466	1031.57638	-0.047501	-2.4548E-05	-3.81	-0.001969	-3.8575	-0.0019935	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.64555	1	8952	8952		44.377	1.981	1	692890			46251	11714	31083	31096	52258	52258					0.06185449197187154
QTIIPKIKLEP	11	Unmodified	_QTIIPKIKLEP_					0	0	0		ENSG00000182158|ENST00000330387|CREB3L2;nc|ENSG00000182158|Q70SY1-2|CREB3L2;nc|ENSG00000182158|Q70SY1-3|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.2715148925781	3	427.270984	1278.79112	1.165	0.00049778	-0.0039216	-1.6756E-06	1.1611	0.0004961	427.2710411965506	36.949	0.94741	37.435	37.078	38.025	0.48581					74	22	5	0	0	0	0.67762	1	2948	2948		35.178	3.544	1	4272200			46252	7427	31084	31097	52259	52259					0.16287951222238917
QTIKQTKGTI	10	Unmodified	_QTIKQTKGTI_					0	0	0			REV__ENST00000362042.7_1_17:46137782-46138226:+|nuORF	REV__ENST00000362042.7_1_17:46137782-46138226:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.3339233398438	2	559.332413	1116.65027	-0.033266	-1.8607E-05	3.2771	0.001833	3.2438	0.0018144	559.3341809592414	63.698	1.6782	64.085	63.314	64.992	0.38681					59	38	2	0	0	0	0.49268	2	6879	6833;6879		56.434	3.4971	1	1917400	+		46253	25520	31085	31098	52260;52261	52261					0.09661372568848492
QTIKQTKGTI	10	Unmodified	_QTIKQTKGTI_					0	0	0			REV__ENST00000362042.7_1_17:46137782-46138226:+|nuORF	REV__ENST00000362042.7_1_17:46137782-46138226:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.3340454101562	2	559.332413	1116.65027	0.24055	0.00013455	3.039	0.0016998	3.2796	0.0018344	559.3340611599375	63.586	1.1315	64.14	63.598	64.729	0.5545					46	26	2	0	0	0	0.57305	1	6868	6868		51.528	0.33506	1	1971700	+		46254	25520	31085	31098	52262	52262					0.09661372568848492
QTISRAALA	9	Unmodified	_QTISRAALA_					0	0	0		ENSG00000185070|ENST00000330753|FLRT2;chr14:85530556-85621139|22|11.59|0.28|5.36|+|ENST00000554746|FLRT2,FLRT2	ENSG00000185070|ENST00000330753|FLRT2	ENSG00000185070|ENST00000330753|FLRT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7720642089844	2	465.771991	929.529429	0.33908	0.00015793	-0.53604	-0.00024967	-0.19696	-9.1736E-05	465.77168744276247	22.614	1.4161	22.196	21.61	23.026	-0.41879					72	32	4	0	0	0	0.76255	1	964	964		35.618	1.4457	1	2020400			46255	179	31086	31099	52263	52263					0.061845896460340555
QTIWDPSEQ	9	Unmodified	_QTIWDPSEQ_					0	0	0			REV__ENST00000531787.5_2_11:60184399-60184972:+|nuORF	REV__ENST00000531787.5_2_11:60184399-60184972:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.2537231445312	2	552.253828	1102.4931	1.2806	0.00070722	-0.73852	-0.00040785	0.5421	0.00029938	552.2532948797596	111.44	1.2081	111.47	110.85	112.06	0.030388					69	46	2	0	0	0	0.7932	1	12227	12227		24.519	3.5723	1	33256	+		46256	28310	31087	31100	52264	52264					-0.05404332041325688
QTKDEDSVL	9	Unmodified	_QTKDEDSVL_					0	0	0			REV__ENST00000400109.2_1_13:19879361-19879751:-|nuORF	REV__ENST00000400109.2_1_13:19879361-19879751:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.753173828125	2	517.753661	1033.49277	-0.43157	-0.00022345	0.20129	0.00010422	-0.23029	-0.00011923	517.7535867827911	61	1.1143	61.39	60.753	61.867	0.38945					51	33	2	0	0	0	0.11055	1	6487	6487		90.37	10.919	1	958090	+		46257	26243	31088	31101	52265	52265					-0.022637517611883595
QTKGLLRYAQQ	11	Unmodified	_QTKGLLRYAQQ_					0	0	0			REV__nc|ENSG00000004766|Q96JG6-3|VPS50	REV__nc|ENSG00000004766|Q96JG6-3|VPS50	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.9142150878906	3	435.913971	1304.72008	-0.0086921	-3.789E-06	0.12341	5.3797E-05	0.11472	5.0008E-05	435.9139113667765	33.132	0.6597	33.135	32.85	33.509	0.0030785					34	14	3	0	0	0	0.74405	1	1908	1908		23.378	0	1	120780	+		46258	16061	31089	31102	52266	52266					0.07991251237467623
QTKIKTAQF	9	Unmodified	_QTKIKTAQF_					0	0	0			REV__nc|ENSG00000146833|Q9C037-3|TRIM4	REV__nc|ENSG00000146833|Q9C037-3|TRIM4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.2374267578125	2	532.808574	1063.60259	0.83701	0.00044596	-0.52744	-0.00028103	0.30956	0.00016494	532.8082446400517	35.804	0.97391	36.052	35.63	36.604	0.24769					26	24	2	0	0	0	0.20789	1	2752	2752		32.812	1.2826	1	154120	+		46259	29918	31090	31103	52267	52267					0.07333718368636255
QTKKKVAVE	9	Unmodified	_QTKKKVAVE_					0	0	0			REV__ENSG00000136866|ENST00000374227|ZFP37	REV__ENSG00000136866|ENST00000374227|ZFP37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8181762695312	2	515.816399	1029.61824	1.6693	0.00086108	-1.7796	-0.00091794	-0.11023	-5.686E-05	515.8153988367579	24.136	0.73672	23.622	23.408	24.144	-0.51365					43	16	4	0	0	0	0.73802	1	1138	1138		37.812	1.3648	1	197840	+		46260	19342	31091	31104	52268	52268					0.10462004885698661
QTKQGRAF	8	Unmodified	_QTKQGRAF_					0	0	0		ENST00000388948.7_2_15:101609189-101609468:+|nuORF	ENST00000388948.7_2_15:101609189-101609468:+|nuORF	ENST00000388948.7_2_15:101609189-101609468:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2569274902344	2	468.256508	934.498464	-0.24701	-0.00011566	-3.3298	-0.0015592	-3.5768	-0.0016749	468.25479155810393	81.956	2.8945	82.014	80.909	83.803	0.057808					126	66	2	0	0	0	0.89962	1	8176	8176		38.806	0	1	193290			46261	10986	31092	31105	52269	52269					0.0285943633180068
QTKRGAAQEA	10	Unmodified	_QTKRGAAQEA_					0	0	0			REV__ENST00000562513.6_1_16:67862078-67865741:-|nuORF	REV__ENST00000562513.6_1_16:67862078-67865741:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2791748046875	2	530.280712	1058.54687	-0.095666	-5.073E-05	2.6031	0.0013804	2.5074	0.0013296	530.2819114752125	76.375	0.64755	76.5	76.185	76.833	0.12485					36	21	2	0	0	0	0.73395	1	7143	7143		42.864	0.46813	1	146950	+		46262	28800	31093	31106	52270	52270					0.01993885181036603
QTKRPWELHRY	11	Unmodified	_QTKRPWELHRY_					0	0	0			REV__ENSG00000188897|ENST00000696174|unknown	REV__ENSG00000188897|ENST00000696174|unknown	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.73272705078125	3	505.27227	1512.79498	0.089149	4.5044E-05	-1.8011	-0.00091006	-1.712	-0.00086501	505.2713193350886	45.502	0.9538	46.398	46.088	47.042	0.89542					64	23	4	0	0	0	0.17996	1	4216	4216		8.4073	0	1	4419900	+		46263	23042	31094	31107	52271	52271					0.059094337686929066
QTKSSALVI	9	Unmodified	_QTKSSALVI_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.7830810546875	2	473.782025	945.549496	-0.30014	-0.0001422	2.1607	0.0010237	1.8606	0.00088151	473.7828602657225	21.786	0.75253	21.722	21.433	22.185	-0.063837					49	24	3	0	0	0	0.7932	1	667	667		23.042	1.0826	1	95857			46264	3556	31095	31108	52272	52272					0.07454340585979935
QTKTIKLLKH	10	Unmodified	_QTKTIKLLKH_					0	0	0			REV__nc|ENSG00000130167|Q9UKR8-3|TSPAN16	REV__nc|ENSG00000130167|Q9UKR8-3|TSPAN16	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9292907714844	3	403.92744	1208.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.487	1	48.487	47.987	48.987	0.00016785								0	0	0	0.45132	1	4037	4037		17.167	3.0807	1		+		46265	18853	31096	31109	52273	52273					0.16446217627867554
QTKTIKLLKH	10	Unmodified	_QTKTIKLLKH_					0	0	0			REV__nc|ENSG00000130167|Q9UKR8-3|TSPAN16	REV__nc|ENSG00000130167|Q9UKR8-3|TSPAN16	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.92962646484375	3	403.92744	1208.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.117	1	48.155	47.655	48.655	0.037731								0	0	0	0.45132	1	3646	3646		17.167	4.2093	1		+		46266	18853	31096	31109	52274	52274					0.16446217627867554
QTLAPQAML	9	Unmodified	_QTLAPQAML_					0	0	0		ENSG00000196456|ENST00000329630|ZNF775	ENSG00000196456|ENST00000329630|ZNF775	ENSG00000196456|ENST00000329630|ZNF775	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.7615966796875	2	486.762778	971.511002	0.20856	0.00010152	-3.7	-0.001801	-3.4915	-0.0016995	486.76086709151963	37.199	3.1666	37.684	37.119	40.285	0.48581					216	76	4	0	0	0	0.55097	1	3143	3143		49.442	3.4693	1	2150800			46267	8059	31097	31110	52275	52275					0.024107116798290917
QTLEKNRAGPE	11	Unmodified	_QTLEKNRAGPE_					0	0	0		nc|ENSG00000072195|Q15772-1|SPEG;ENSG00000072195|ENST00000312358|SPEG	nc|ENSG00000072195|Q15772-1|SPEG	nc|ENSG00000072195|Q15772-1|SPEG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.9062194824219	3	414.886081	1241.63641	0.24746	0.00010267	-3.3893	-0.0014062	-3.1418	-0.0013035	414.88458731599104	31.052	0.69424	31.055	30.579	31.274	0.0037212					27	15	3	0	0	0	0.17331	1	2109	2109		30.139	3.3894	1	79496			46268	1271	31098	31111	52276	52276					0.02526095069765688
QTLETRDC	8	Unmodified	_QTLETRDC_					0	0	0		nc|ENSG821|P63135|ERVK-7_pol;nc|ENSG819|P61567|ERVK-7_env	nc|ENSG821|P63135|ERVK-7_pol	nc|ENSG821|P63135|ERVK-7_pol	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2562561035156	2	483.221474	964.428395	0.80177	0.00038743	-0.92151	-0.00044529	-0.11974	-5.7862E-05	483.22076111358473	35.87	0.19046	36.117	36.043	36.234	0.24769					6	4	2	0	0	0	0.4196	1	2779	2779		18.324	6.8134	1	115800			46269	15361	31099	31112	52277	52277					-0.05524230118987816
QTLGRISP	8	Unmodified	_QTLGRISP_					0	0	0		ENSG00000006634|ENST00000265728|DBF4;ENST00000486925.1_1_7:87505915-87514494:+|nuORF;nc|ENSG00000006634|Q9UBU7-2|DBF4	ENSG00000006634|ENST00000265728|DBF4	ENSG00000006634|ENST00000265728|DBF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.2550354003906	2	436.253434	870.492316	1.8861	0.00082282	1.8789	0.00081969	3.7651	0.0016425	436.2540023475616	112.21	0.53641	112.24	112.11	112.65	0.030602					22	19	2	0	0	0	0.89494	1	13570	13570		37.159	1.5408	1	431720			46270	706	31100	31113	52278	52278					0.051889181002820806
QTLKKGSL	8	Unmodified	_QTLKKGSL_					0	0	0			REV__ENSG00000151025|ENST00000376351|GPR158	REV__ENSG00000151025|ENST00000376351|GPR158	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713623046875	2	437.77146	873.528367	-0.63876	-0.00027963	0.070293	3.0772E-05	-0.56847	-0.00024886	437.77162175664915	38.677	1.0193	39.199	38.87	39.89	0.52235					96	23	6	0	0	0	0.80514	1	3194	3194		19.104	0.84144	1	19739000	+		46271	20235	31101	31114	52279	52279					0.08654375277149029
QTLKLTQKA	9	Unmodified	_QTLKLTQKA_					0	0	0			REV__ENST00000343882.10_1_6:108986065-109001113:+|nuORF	REV__ENST00000343882.10_1_6:108986065-109001113:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8173217773438	2	515.816399	1029.61824	1.6693	0.00086108	-1.7796	-0.00091794	-0.11023	-5.686E-05	515.8153988367579	24.136	0.73672	23.622	23.408	24.144	-0.51365					43	16	4	0	0	0	0.54908	1	1150	1150		49.536	0	1	197840	+		46272	25295	31102	31115	52280	52280					0.10462004885698661
QTLKTAKTK	9	Unmodified	_QTLKTAKTK_					0	0	0		ENSG00000068784|ENST00000263736|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8136901855469	2	509.816399	1017.61824	0.63506	0.00032376	-3.5869	-0.0018286	-2.9518	-0.0015049	509.8142843245604	80.674	0.49664	81.201	80.949	81.446	0.52677					15	11	2	0	0	0	0.20789	1	9307	9307		11.636	5.3233	1	66913			46273	1207	31103	31116	52281	52281					0.11014004885691975
QTLLKYPINHF	11	Unmodified	_QTLLKYPINHF_					0	0	0		ENSG00000166743|ENST00000520010|ACSM1	ENSG00000166743|ENST00000520010|ACSM1	ENSG00000166743|ENST00000520010|ACSM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.733154296875	3	458.590717	1372.75032	-1.287	-0.00059021	-4.3295	-0.0019855	-5.6165	-0.0025757	458.58862902966985	31.361	0.39224	31.441	31.165	31.558	0.079834					13	8	2	0	0	0	0.17729	1	2085	2085		23.378	12.816	1	64547			46274	6225	31104	31117	52282	52282					0.07885609902655233
QTLPALTV	8	Unmodified	_QTLPALTV_					0	0	0		ENSG00000185245|ENST00000329125|GP1BA	ENSG00000185245|ENST00000329125|GP1BA	ENSG00000185245|ENST00000329125|GP1BA	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.751708984375	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.549	1	74.592	74.092	75.092	0.0429								0	0	0	0.29245	1	7136	7136		30.504	3.7075	1				46275	7692	31105	31118	52283	52283					0.06383284011519663
QTLSCHLRVI	10	Unmodified	_QTLSCHLRVI_					0	0	0			REV__ENST00000503561.7_1_5:50057675-50130728:+|nuORF	REV__ENST00000503561.7_1_5:50057675-50130728:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.3258666992188	2	585.326608	1168.63866	-1.6605	-0.00097193	-2.2046	-0.0012904	-3.8651	-0.0022623	585.3254129056655	59.604	0.79423	59.995	59.651	60.445	0.39077					42	19	3	0	0	0	0.51302	1	6284	6284		54.776	1.8396	1	541780	+		46276	20276	31106	31119	52284	52284					0.06108852273882803
QTLSRRSSMQ	10	Unmodified	_QTLSRRSSMQ_					0	0	0			REV__ENST00000569136.5_1_15:42701576-42702036:+|nuORF	REV__ENST00000569136.5_1_15:42701576-42702036:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.18994140625	2	597.306403	1192.59825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.7	1	71.777	71.277	72.277	0.076225								0	0	0	0.45132	1	6513	6513		28.081	0.19925	1		+		46277	28907	31107	31120	52285	52285					0.009658858834654893
QTLVPLACL	9	Unmodified	_QTLVPLACL_					0	0	0			REV__nc|ENSG00000211672|A0A075B6K6|IGLV4-3	REV__nc|ENSG00000211672|A0A075B6K6|IGLV4-3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2779846191406	2	479.275521	956.536489	0.75121	0.00036004	3.9365	0.0018867	4.6877	0.0022467	479.2773206113693	97.297	1.0964	97.46	96.922	98.018	0.16317					63	25	3	0	0	0	0.74721	1	10078	10078		37.159	3.6661	1	731730	+		46278	30181	31108	31121	52286	52286					0.05648186202256511
QTLVRRTR	8	Unmodified	_QTLVRRTR_					0	0	0		ENST00000540006.5_1_13:111293886-111296904:-|nuORF	ENST00000540006.5_1_13:111293886-111296904:-|nuORF	ENST00000540006.5_1_13:111293886-111296904:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3157348632812	2	515.317432	1028.62031	0.14223	7.3293E-05	-2.7069	-0.0013949	-2.5647	-0.0013216	515.3158766132427	22.128	0.48729	21.517	21.295	21.782	-0.6107					33	12	4	0	0	0	0.9283	1	884	884		49.442	1.5259	1	280240			46279	13489	31109	31122	52287	52287					0.10714478414161022
QTLYSLLKFVK	11	Unmodified	_QTLYSLLKFVK_					0	0	0			REV__ENSG00000197472|ENST00000339986|ZNF695	REV__ENSG00000197472|ENST00000339986|ZNF695	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.2740173339844	3	447.270984	1338.79112	2.7481	0.0012291	1.5625	0.00069887	4.3106	0.001928	447.2715969592816	107.28	1.0213	107.25	106.57	107.59	-0.034134					90	23	5	0	0	0	0.72374	1	11856	11856		27.644	0.89421	1	9462500	+		46280	23236	31110	31123	52288	52288					0.1352795122227235
QTMDGDWE	8	Unmodified	_QTMDGDWE_					0	0	0		ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.1881103515625	2	491.184557	980.354561	-0.081959	-4.0257E-05	2.0498	0.0010068	1.9678	0.00096657	491.1854436193473	64.538	1.8054	64.538	63.212	65.018	-0.00078583					113	67	2	0	0	0	0.8347	1	6058	6058		23.042	1.0826	1	132810			46281	8055	31111	31124	52289	52289					-0.13640198281314042
QTMDGDWE	8	Unmodified	_QTMDGDWE_					0	0	0		ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.1841735839844	2	491.184557	980.354561	-0.081276	-3.9921E-05	2.0079	0.00098624	1.9266	0.00094632	491.18538846506436	74.021	0.69407	74.064	73.923	74.617	0.0429					45	30	2	0	0	0	0.87922	1	7073	7073		31.955	1.4512	1	232210			46282	8055	31111	31124	52290	52290					-0.13640198281314042
QTMHAIYE	8	Unmodified	_QTMHAIYE_					0	0	0		ENSG00000100294|ENST00000290429|MCAT	ENSG00000100294|ENST00000290429|MCAT	ENSG00000100294|ENST00000290429|MCAT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.1328125	2	496.728935	991.443317	0.009549	4.7433E-06	0.3516	0.00017465	0.36115	0.00017939	496.7288552478886	36.501	0.2961	36.783	36.553	36.849	0.28173					8	6	2	0	0	0	0.4196	1	2855	2855		23.042	0	1	47106			46283	1822	31112	31125	52291	52291					-0.05274738251000599
QTMHIMADL	9	Unmodified	_QTMHIMADL_					0	0	0		nc|ENSG00000011143|Q9NXB0-2|MKS1;nc|ENSG00000011143|Q9NXB0-3|MKS1;ENSG00000011143|ENST00000393119|MKS1	nc|ENSG00000011143|Q9NXB0-2|MKS1	nc|ENSG00000011143|Q9NXB0-2|MKS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.261474609375	2	530.25172	1058.48889	-0.29518	-0.00015652	-2.6418	-0.0014008	-2.937	-0.0015573	530.250313441938	53.829	0.54181	54.413	54.249	54.79	0.58474					15	12	2	0	0	0	0.20789	1	5457	5457		20.947	0	1	270190			46284	782	31113	31126	52292	52292					-0.03801836060233654
QTMKKCNAKHN	11	Unmodified	_QTMKKCNAKHN_					0	0	0			REV__ENST00000418987.2_1_9:103493819-103494230:+|nuORF	REV__ENST00000418987.2_1_9:103493819-103494230:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.21856689453125	3	434.88503	1301.63326	-1.5919	-0.00069227	1.0134	0.00044071	-0.57846	-0.00025156	435.2205932066213	66.653	1.1577	66.786	66.495	67.653	0.13326					57	47	2	0	0	0	0.71803	1	5916	5916		28.577	5.1988	1	231290	+		46285	26469	31114	31127	52293	52293					-0.0054919458025324275
QTMVVDGRSAP	11	Unmodified	_QTMVVDGRSAP_					0	0	0			REV__nc|ENSG00000211626|A0A0C4DH26|IGKV6D-41	REV__nc|ENSG00000211626|A0A0C4DH26|IGKV6D-41	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.7904052734375	2	580.790055	1159.56556	-0.42667	-0.00024781	1.2119	0.00070384	0.78519	0.00045603	580.7906128619697	19.702	1.115	19.232	18.974	20.089	-0.46967					60	23	3	0	0	0	0.72739	1	634	634		27.047	0	1	396860	+		46286	30177	31115	31128	52294	52294					-0.007843212393936483
QTMWEKELQKL	11	Unmodified	_QTMWEKELQKL_					0	0	0			REV__ENSG00000156502|ENST00000359655|SUPV3L1	REV__ENSG00000156502|ENST00000359655|SUPV3L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.5876770019531	3	478.586755	1432.73844	-0.064351	-3.0797E-05	1.0191	0.00048772	0.95474	0.00045692	478.5874879701833	48.705	1.8625	49.165	48.416	50.278	0.45983					145	45	6	0	0	0	0.098554	2	4703	4703;4728		93.442	21.153	1	22356000	+		46287	20492	31116	31129	52295;52296	52295					0.03937625097137243
QTMWEKELQKL	11	Unmodified	_QTMWEKELQKL_					0	0	0			REV__ENSG00000156502|ENST00000359655|SUPV3L1	REV__ENSG00000156502|ENST00000359655|SUPV3L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.5876770019531	3	478.586755	1432.73844	-0.82422	-0.00039446	1.8207	0.00087136	0.99648	0.0004769	478.5878634148912	48.525	1.45	49.429	48.963	50.413	0.90424					125	35	5	0	0	0	0.14207	4	4681	4661;4681;4705;4743		82.831	8.1115	1	21529000	+		46288	20492	31116	31129	52297;52298;52299;52300	52298					0.03937625097137243
QTNHVKDVK	9	Unmodified	_QTNHVKDVK_					0	0	0		nc|ENSG00000065883|Q14004-2|CDK13;ENSG00000065883|ENST00000181839|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	534.7952270507812	2	534.793455	1067.57236	-0.052812	-2.8243E-05	3.5637	0.0019058	3.5109	0.0018776	534.7953394938359	58.03	0.8242	58.016	57.676	58.5	-0.013638					56	27	3	0	0	0	0.76419	1	5276	5276		35.152	2.3396	1	226440			46289	1144	31117	31130	52301	52301					0.04127359703466027
QTNISLRCY	9	Unmodified	_QTNISLRCY_					0	0	0			REV__ENST00000509182.1_1_5:61688751-61699599:-|nuORF	REV__ENST00000509182.1_1_5:61688751-61699599:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.8302612304688	2	549.274041	1096.53353	-2.1085	-0.0011582	-1.2296	-0.00067539	-3.3381	-0.0018335	549.273176548388	42.784	0.57405	43.217	42.804	43.378	0.4334					21	13	3	0	0	0	0.20789	1	3853	3853		45.952	3.5558	1	260470	+		46290	15857	31118	31131	52302	52302					-0.01087688922552843
QTNPIIDIKLE	11	Unmodified	_QTNPIIDIKLE_					0	0	0			REV__ENST00000507090.2_1_4:13338255-13338456:+|nuORF	REV__ENST00000507090.2_1_4:13338255-13338456:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.3638916015625	2	642.36391	1282.71327	0.94243	0.00060538	-3.3683	-0.0021637	-2.4259	-0.0015583	642.3626446280917	111.26	0.57246	111.33	110.96	111.53	0.069542					80	21	4	0	0	0	0.75906	1	11969	11969		20.03	0.033703	1	3156600	+		46291	27900	31119	31132	52303	52303					0.08321893566221661
QTNQLKTY	8	Unmodified	_QTNQLKTY_					0	0	0			REV__nc|ENSG00000177200|Q3L8U1-2|CHD9	REV__nc|ENSG00000177200|Q3L8U1-2|CHD9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2851867675781	2	498.261456	994.50836	-0.97392	-0.00048527	1.3444	0.00066987	0.37049	0.0001846	498.26188268633837	27.488	0.43653	27.313	27.06	27.497	-0.17559					14	9	2	0	0	0	0.4196	1	1583	1583		34.173	5.023	1	77586	+		46292	22190	31120	31133	52304	52304					0.010885795465242154
QTNSADLN	8	Unmodified	_QTNSADLN_					0	0	0			REV__ENSG00000110318|ENST00000263468|CEP126	REV__ENSG00000110318|ENST00000263468|CEP126	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.70013427734375	2	431.698689	861.382825	1.9353	0.00083548	-0.22598	-9.7554E-05	1.7093	0.00073792	431.6984650172347	107.78	0.38459	107.89	107.55	107.93	0.10396					26	16	4	0	0	0	0.87922	1	13148	13148		31.955	0	1	3654600	+		46293	17806	31121	31134	52305	52305					-0.05341132309729346
QTNSADLN	8	Unmodified	_QTNSADLN_					0	0	0			REV__ENSG00000110318|ENST00000263468|CEP126	REV__ENSG00000110318|ENST00000263468|CEP126	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	431.698689	861.382825	1.9353	0.00083548	-0.22598	-9.7554E-05	1.7093	0.00073792	431.6984650172347	107.78	0.38459	107.89	107.55	107.93	0.10396	0.010553	0.0020486	NaN	31.955	26	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3654600	+		46294	17806	31121	31134							-0.05341132309729346
QTNSADLN	8	Unmodified	_QTNSADLN_					0	0	0			REV__ENSG00000110318|ENST00000263468|CEP126	REV__ENSG00000110318|ENST00000263468|CEP126	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	431.698689	861.382825	5.0231	0.0021685	-3.473	-0.0014993	1.5502	0.00066921	431.697108352617	107.75	0.40053	107.87	107.54	107.94	0.11715	-0.010553	-0.00075482	NaN	31.955	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2661600	+		46295	17806	31121	31134							-0.05341132309729346
QTNYDLPTQHH	11	Unmodified	_QTNYDLPTQHH_					0	0	0			REV__ENSG00000101972|ENST00000371145|STAG2	REV__ENSG00000101972|ENST00000371145|STAG2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.7683410644531	3	451.877586	1352.61093	-0.30228	-0.00013659	0.94567	0.00042733	0.64339	0.00029073	451.87841767355394	29.722	0.39637	29.679	29.476	29.872	-0.043095					12	9	2	0	0	0	0.17536	1	1577	1577		32.034	16.113	1	15061	+		46296	17314	31122	31135	52306	52306					-0.05127379452665082
QTPELPGP	8	Unmodified	_QTPELPGP_					0	0	0			REV__ENSG00000213928|ENST00000396864|IRF9	REV__ENSG00000213928|ENST00000396864|IRF9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7171936035156	2	419.718893	837.423233	0.17461	7.3288E-05	-0.79184	-0.00033235	-0.61723	-0.00025906	419.7184802033485	43.588	1.0293	43.561	43.187	44.216	-0.026764					41	24	2	0	0	0	0.90465	1	3376	3376		40.573	5.3719	1	235560	+		46297	23637	31123	31136	52307	52307					-0.0019816591927792615
QTPETKLLNRI	11	Unmodified	_QTPETKLLNRI_					0	0	0			REV__ENSG00000162889|ENST00000367103|MAPKAPK2	REV__ENSG00000162889|ENST00000367103|MAPKAPK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2585754394531	3	438.257626	1311.75105	1.3695	0.00060021	-1.2844	-0.00056291	0.085112	3.7301E-05	438.25703315598963	31.177	0.62991	31.167	30.842	31.472	-0.010656					32	14	3	0	0	0	0.71803	1	1678	1678		28.577	1.5294	1	49445	+		46298	20860	31124	31137	52308	52308					0.10764404551719053
QTPGAAATCI	10	Unmodified	_QTPGAAATCI_					0	0	0			REV__ENSG00000124215|ENST00000348616|CDH26	REV__ENSG00000124215|ENST00000348616|CDH26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.72705078125	2	466.728935	931.443317	0.27426	0.00012801	-2.376	-0.0011089	-2.1017	-0.00098094	466.72694153892775	34.642	0.64356	34.852	34.522	35.166	0.21003					26	15	2	0	0	0	0.86587	1	2591	2591		29.17	0	1	332730	+		46299	18572	31125	31138	52309	52309					-0.02514738250999926
QTPHFNSPIV	10	Unmodified	_QTPHFNSPIV_					0	0	0			REV__nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8	REV__nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.2940673828125	2	570.29583	1138.57711	-0.46386	-0.00026454	0.00054839	3.1274E-07	-0.46331	-0.00026422	570.2956874292098	62.034	0.54156	62.05	61.764	62.306	0.015724					47	20	3	0	0	0	0.73395	1	5398	5398		42.864	2.0861	1	694080	+		46300	20347	31126	31139	52310	52310					0.013362438462081627
QTPIQEKH	8	Unmodified	_QTPIQEKH_					0	0	0		ENST00000375050.5_1_6:32153594-32154113:-|nuORF	ENST00000375050.5_1_6:32153594-32154113:-|nuORF	ENST00000375050.5_1_6:32153594-32154113:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.7625427246094	2	490.761623	979.508694	0.97193	0.00047698	-1.4264	-0.00070005	-0.45452	-0.00022306	490.76046891491	20.127	0.40246	20.198	20.016	20.418	0.071127					24	15	2	0	0	0	0.87922	1	477	477		31.955	0	1	32582			46301	10790	31127	31140	52311	52311					0.01811999266374187
QTPIVPFR	8	Unmodified	_QTPIVPFR_					0	0	0		ENSG00000105738|ENST00000222345|SIPA1L3	ENSG00000105738|ENST00000222345|SIPA1L3	ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27764892578125	2	479.279452	956.544351	-1.1288	-0.000541	-3.1146	-0.0014928	-4.2434	-0.0020338	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.84341	1	7561	7561		24.203	3.2558	1	1311100			46302	2249	31128	31141	52312	52312					0.0643408151404401
QTPKIVNFV	9	Unmodified	_QTPKIVNFV_					0	0	0		nc|ENSG00000077238|P24394-3|IL4R;ENSG00000077238|ENST00000395762|IL4R	nc|ENSG00000077238|P24394-3|IL4R	nc|ENSG00000077238|P24394-3|IL4R	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.30322265625	2	523.305667	1044.59678	-0.83281	-0.00043582	-3.2133	-0.0016815	-4.0461	-0.0021173	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.77696	1	8287	8287		31.53	1.2121	1	2778600			46303	1376	31129	31142	52313	52313					0.0762661985700106
QTPKIVNFV	9	Unmodified	_QTPKIVNFV_					0	0	0		nc|ENSG00000077238|P24394-3|IL4R;ENSG00000077238|ENST00000395762|IL4R	nc|ENSG00000077238|P24394-3|IL4R	nc|ENSG00000077238|P24394-3|IL4R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.30322265625	2	523.305667	1044.59678	-0.041393	-2.1661E-05	-4.0495	-0.0021191	-4.0909	-0.0021408	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.77244	1	8686	8686		32.812	1.2826	1	3850300			46304	1376	31129	31142	52314	52314					0.0762661985700106
QTPKIVNFV	9	Unmodified	_QTPKIVNFV_					0	0	0		nc|ENSG00000077238|P24394-3|IL4R;ENSG00000077238|ENST00000395762|IL4R	nc|ENSG00000077238|P24394-3|IL4R	nc|ENSG00000077238|P24394-3|IL4R	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3040771484375	2	523.305667	1044.59678	-0.50611	-0.00026485	-3.5572	-0.0018615	-4.0633	-0.0021264	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.7932	1	10003	10003		23.523	0.94304	1	3970100			46305	1376	31129	31142	52315	52315					0.0762661985700106
QTPMYFFLRNL	11	Unmodified	_QTPMYFFLRNL_					0	0	0		ENST00000419087.1_1_1:247782982-247783861:+|nuORF;ENSG00000198452|ENST00000641545|OR14L1P	ENST00000419087.1_1_1:247782982-247783861:+|nuORF	ENST00000419087.1_1_1:247782982-247783861:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.31500244140625	3	477.248074	1428.72239	-0.38532	-0.00018389	-1.5877	-0.00075772	-1.973	-0.00094161	477.2471368624455	33.648	0.18303	33.592	33.468	33.651	-0.056385					5	3	2	0	0	0	0.17365	1	2056	2056		21.032	0	1	11385			46306	8274	31130	31143	52316	52316					0.025179636509164993
QTPMYTSENR	10	Unmodified	_QTPMYTSENR_					0	0	0		ENSG00000100557|ENST00000216445|CCDC198	ENSG00000100557|ENST00000216445|CCDC198	ENSG00000100557|ENST00000216445|CCDC198	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	410.21881103515625	3	409.520522	1225.53974	2.9492	0.0012077	0.69106	0.000283	3.6402	0.0014907	409.5206535835905	16.85	0.17597	16.768	16.66	16.836	-0.0821					15	6	3	0	0	0	0.37624	1	182	182		18.531	0	1	55805			46307	1847	31131	31144	52317	52317					-0.06401215481696454
QTPPKRSR	8	Unmodified	_QTPPKRSR_					0	0	0			REV__ENST00000296575.7_1_4:145567307-145567847:+|nuORF	REV__ENST00000296575.7_1_4:145567307-145567847:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2870788574219	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.456	1	41.46	40.96	41.96	0.0043983								0	0	0	0.29245	1	2711	2711		30.504	0.6621	1		+		46308	24717	31132	31145	52318	52318					0.06602814114467037
QTPPLLSD	8	Unmodified	_QTPPLLSD_					0	0	0			REV__nc|ENSG00000187605|O43151-2|TET3	REV__nc|ENSG00000187605|O43151-2|TET3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2518005371094	2	435.732	869.449448	-0.16517	-7.197E-05	-2.9031	-0.001265	-3.0683	-0.0013369	435.73091748720196	80.614	2.3007	80.676	80.311	82.611	0.062225					80	56	2	0	0	0	0.4196	1	8019	8019		26.693	4.733	1	110860	+		46309	22926	31133	31146	52319	52319					0.009501032521825437
QTPPLLTL	8	Unmodified	_QTPPLLTL_					0	0	0		ENST00000459919.1_1_1:151261826-151261955:+|nuORF	ENST00000459919.1_1_1:151261826-151261955:+|nuORF	ENST00000459919.1_1_1:151261826-151261955:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7675476074219	2	441.768386	881.522219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.935	1	63.963	63.463	64.463	0.027142								0	0	0	0.29871	1	6005	6005		23.042	3.6825	1				46310	11997	31134	31147	52320	52320					0.07671857045602337
QTPPPFLL	8	Unmodified	_QTPPPFLL_					0	0	0		ENST00000335515.10_2_6:41749076-41749232:+|nuORF;ENST00000456057.5_2_6:41748514-41749232:+|nuORF	ENST00000335515.10_2_6:41749076-41749232:+|nuORF	ENST00000335515.10_2_6:41749076-41749232:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3009338378906	2	456.763104	911.511654	-0.073363	-3.351E-05	-4.3115	-0.0019694	-4.3849	-0.0020029	456.76109623625416	34.547	0.64022	34.542	34.217	34.857	-0.0047417					30	15	3	0	0	0	0.4196	1	2059	2059		31.955	6.5047	1	111100			46311	10160	31135	31148	52321	52321					0.052358743911895544
QTPQQKKN	8	Unmodified	_QTPQQKKN_					0	0	0			REV__nc|ENSG00000079691|Q5VZK9-2|CARMIL1	REV__nc|ENSG00000079691|Q5VZK9-2|CARMIL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.2671203613281	2	486.267073	970.519593	-1.6066	-0.00078124	1.8314	0.00089055	0.2248	0.00010932	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.89494	1	8465	8465		37.159	1.5408	1	1531500	+		46312	16790	31136	31149	52322	52322					0.03315401640657001
QTPRRLKRRRR	11	Unmodified	_QTPRRLKRRRR_					0	0	0		ENST00000321448.12_1_11:74648098-74660104:-|nuORF;ENST00000530562.5_1_11:74648079-74660104:-|nuORF	ENST00000321448.12_1_11:74648098-74660104:-|nuORF	ENST00000321448.12_1_11:74648098-74660104:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8150939941406	3	508.325702	1521.95528	-0.41617	-0.00021155	-1.7145	-0.00087154	-2.1307	-0.0010831	508.32466422888297	44.478	0.97291	45.322	44.694	45.667	0.84438					50	23	3	0	0	0	0.18318	1	4035	4035		1.3219	0	1	183270			46313	10039	31137	31150	52323	52323					0.21517826276226515
QTPRVASI	8	Unmodified	_QTPRVASI_					0	0	0		ENST00000307403.6_1_7:155532339-155538302:+|nuORF;ENSG00000184863|ENST00000401878|RBM33	ENST00000307403.6_1_7:155532339-155538302:+|nuORF	ENST00000307403.6_1_7:155532339-155538302:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.2539367675781	2	436.253434	870.492316	2.1857	0.00095352	1.2941	0.00056457	3.4798	0.0015181	436.2538705634068	114.35	2.7328	114.38	114.11	116.84	0.026459					117	82	2	0	0	0	0.80308	1	12582	12582		16.473	0	1	78531			46314	7647	31138	31151	52324	52324					0.051889181002820806
QTPSDRQRAIQ	11	Unmodified	_QTPSDRQRAIQ_					0	0	0		nc|ENSG00000122126|Q01968-2|OCRL;ENSG00000122126|ENST00000371113|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.8988342285156	3	433.89698	1298.66911	0.38289	0.00016613	2.6588	0.0011536	3.0417	0.0013198	433.89805625003885	20.004	0.95407	19.374	19.122	20.076	-0.6296					42	20	4	0	0	0	0.52654	1	604	604		50.034	10.16	1	502150			46315	3211	31139	31152	52325	52325					0.031723021926154615
QTPSPPAKKP	10	Unmodified	_QTPSPPAKKP_					0	0	0		ENSG00000229474|ENST00000682850|PATL2	ENSG00000229474|ENST00000682850|PATL2	ENSG00000229474|ENST00000682850|PATL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.8274536132812	2	525.800749	1049.58694	2.0362	0.0010707	-3.9883	-0.002097	-1.952	-0.0010264	526.2997549024691	98.614	1.1893	98.975	97.907	99.096	0.36137					39	28	2	0	0	0	0.37624	1	11897	11897		23.523	0	1	91477			46316	8726	31140	31153	52326	52326					0.06413431851615314
QTPVLVVL	8	Unmodified	_QTPVLVVL_					0	0	0		ENSG00000180758|ENST00000377411|GPR157	ENSG00000180758|ENST00000377411|GPR157	ENSG00000180758|ENST00000377411|GPR157	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7791442871094	2	434.778754	867.542954	1.2416	0.00053983	1.4609	0.00063516	2.7025	0.001175	434.77928458805707	50.665	0.98352	51.416	51.08	52.063	0.75174					40	23	2	0	0	0	0.89457	1	5020	5020		37.028	1.8278	1	345360			46317	7343	31141	31154	52327	52327					0.10388447425293634
QTPVLVVL	8	Unmodified	_QTPVLVVL_					0	0	0		ENSG00000180758|ENST00000377411|GPR157	ENSG00000180758|ENST00000377411|GPR157	ENSG00000180758|ENST00000377411|GPR157	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	434.778754	867.542954	-0.07296	-3.1722E-05	3.0612	0.0013309	2.9882	0.0012992	434.7799037764808	51.173	2.0341	51.171	50.749	52.783	-0.0020447	-0.1227	0.00051232	NaN	37.028	140	53	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	411540			46318	7343	31141	31154							0.10388447425293634
QTPVVIIGL	9	Unmodified	_QTPVVIIGL_					0	0	0		CON__Q2YDI2	CON__Q2YDI2	CON__Q2YDI2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	469.7196960449219	2	470.29731	938.580068	-1.8414	-0.00086602	4.2846	0.002015	2.4432	0.001149	470.299171298899	36.635	0.88135	36.635	36.381	37.263	0					30	19	2	0	0	0	0.20789	1	2105	2105		32.812	10.853	1	44156		+	46319	617	31142	31155	52328	52328					0.10832118971029558
QTPVVIIGL	9	Unmodified	_QTPVVIIGL_					0	0	0		CON__Q2YDI2	CON__Q2YDI2	CON__Q2YDI2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	470.29731	938.580068	-0.87384	-0.00041096	3.4695	0.0016317	2.5957	0.0012207	470.2987861530223	36.913	0.84454	36.859	36.381	37.226	-0.053558	0.074244	-0.00060097	NaN	32.812	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38799		+	46320	617	31142	31155							0.10832118971029558
QTPVVIIGL	9	Unmodified	_QTPVVIIGL_					0	0	0		CON__Q2YDI2	CON__Q2YDI2	CON__Q2YDI2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	470.29731	938.580068	-2.0234	-0.00095162	4.8653	0.0022881	2.8418	0.0013365	470.2994802471404	36.85	0.93607	36.861	36.614	37.55	0.011173	0.075881	0.00071188	NaN	32.812	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40896		+	46321	617	31142	31155							0.10832118971029558
QTPYQVLG	8	Unmodified	_QTPYQVLG_					0	0	0		chr7:130428018-130452242|27|26.63|0.0|21.34|-|0|TE_info:L2b,L2b_dup42146,L2,LINE,donor,+,130452242,130452637|CEP41,None|2	chr7:130428018-130452242|27|26.63|0.0|21.34|-|0|TE_info:L2b,L2b_dup42146,L2,LINE,donor,+,130452242,130452637|CEP41,None|2	chr7:130428018-130452242|27|26.63|0.0|21.34|-|0|TE_info:L2b,L2b_dup42146,L2,LINE,donor,+,130452242,130452637|CEP41,None|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7656555175781	2	453.239993	904.465432	-1.653	-0.00074919	0.75278	0.00034119	-0.90019	-0.000408	453.23996004730725	41.69	0.45119	42.324	42.135	42.586	0.6339					15	11	2	0	0	0	0.4196	1	3688	3688		51.335	15.717	1	283530			46322	491	31143	31156	52329	52329					0.009378094891076216
QTQECAAG	8	Unmodified	_QTQECAAG_					0	0	0			REV__ENSG00000157131|ENST00000361249|C8A	REV__ENSG00000157131|ENST00000361249|C8A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.17120361328125	2	404.16871	806.322867	-1.318	-0.00053271	4.3696	0.0017661	3.0516	0.0012334	404.1707263168683	78.641	1.8199	78.641	78.235	80.055	0					146	66	5	0	0	0	0.85277	1	7169	7169		25.45	1.2474	1	3046600	+		46323	20530	31144	31157	52330	52330					-0.08804146244597177
QTQGRDKNQ	9	Unmodified	_QTQGRDKNQ_					0	0	0			REV__ENST00000577783.2_1_17:77079170-77080166:+|nuORF	REV__ENST00000577783.2_1_17:77079170-77080166:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.7697143554688	2	537.767968	1073.52138	0.2234	0.00012014	2.7662	0.0014876	2.9896	0.0016077	537.7692334658091	24.754	0.76684	24.426	24.116	24.883	-0.32825					45	16	4	0	0	0	0.36616	1	1244	1244		60.118	3.3972	1	482240	+		46324	29015	31145	31158	52331	52331					-0.012435893414021848
QTQIPHSYI	9	Unmodified	_QTQIPHSYI_					0	0	0			REV__nc|ENSG00000161813|Q71RC2-7|LARP4	REV__nc|ENSG00000161813|Q71RC2-7|LARP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.7791137695312	2	543.782556	1085.55056	0.26988	0.00014675	-1.4354	-0.00078053	-1.1655	-0.00063377	543.7814170421531	31.842	1.1132	31.95	31.505	32.619	0.10707					59	25	4	0	0	0	0.71772	1	2243	2243		39.253	2.0937	1	355150	+		46325	20781	31146	31159	52332	52332					0.011205549548776617
QTQKLLKVPKG	11	Unmodified	_QTQKLLKVPKG_					0	0	0		ENST00000569891.5_1_16:50783609-50818363:+|nuORF;nc|ENSG00000083799|Q9NQC7-2|CYLD;ENSG00000083799|ENST00000427738|CYLD	ENST00000569891.5_1_16:50783609-50818363:+|nuORF	ENST00000569891.5_1_16:50783609-50818363:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.93243408203125	3	413.930962	1238.77106	1.9789	0.00081913	2.3996	0.00099326	4.3785	0.0018124	413.9318701140447	44.846	2.3922	44.842	44.201	46.593	-0.0041618					170	56	4	0	0	0	0.72892	1	3645	3645		26.75	4.1881	1	713740			46326	1506	31147	31160	52333	52333					0.161222002823024
QTQKLLKVPKG	11	Unmodified	_QTQKLLKVPKG_					0	0	0		ENST00000569891.5_1_16:50783609-50818363:+|nuORF;nc|ENSG00000083799|Q9NQC7-2|CYLD;ENSG00000083799|ENST00000427738|CYLD	ENST00000569891.5_1_16:50783609-50818363:+|nuORF	ENST00000569891.5_1_16:50783609-50818363:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9324951171875	3	413.930962	1238.77106	0.21387	8.8526E-05	4.0224	0.001665	4.2363	0.0017535	413.93255960283653	42.979	1.989	43.044	42.116	44.105	0.065033					113	52	3	0	0	0	0.68431	2	3043	2977;3043		34.087	12.306	1	432840			46327	1506	31147	31160	52334;52335	52335					0.161222002823024
QTQLEAMEL	9	Unmodified	_QTQLEAMEL_					0	0	0		nc|ENSG00000136877|Q05932-3|FPGS;nc|ENSG00000136877|Q05932-2|FPGS;nc|ENSG00000136877|Q05932-4|FPGS;ENSG00000136877|ENST00000373247|FPGS;ENST00000479375.6_1_9:130556974-130569527:+|nuORF;ENST00000460181.5_1_9:130565203-130569527:+|nuORF;ENST00000488307.5_1_9:130565203-130570042:+|nuORF	nc|ENSG00000136877|Q05932-3|FPGS	nc|ENSG00000136877|Q05932-3|FPGS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.1860961914062	2	531.760432	1061.50631	-0.065045	-3.4588E-05	-0.47415	-0.00025213	-0.53919	-0.00028672	531.7598412480157	48.509	0.55932	49.413	49.126	49.686	0.90424					18	13	2	0	0	0	0.20789	1	4702	4702		39.253	12.56	1	236020			46328	4150	31148	31161	52336	52336					-0.02198217253612711
QTQLKPIAV	9	Unmodified	_QTQLKPIAV_					0	0	0			REV__ENSG00000109323|ENST00000647097|MANBA	REV__ENSG00000109323|ENST00000647097|MANBA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.3046569824219	2	499.305667	996.596781	2.5883	0.0012923	-2.3542	-0.0011755	0.23408	0.00011688	499.30452757705115	25.928	0.84452	25.497	24.983	25.827	-0.4311					32	19	2	0	0	0	0.71772	1	1383	1383		39.253	5.0803	1	195240	+		46329	17755	31149	31162	52337	52337					0.09834619856974314
QTRALLRV	8	Unmodified	_QTRALLRV_					0	0	0		ENSG00000113555|ENST00000231484|PCDH12	ENSG00000113555|ENST00000231484|PCDH12	ENSG00000113555|ENST00000231484|PCDH12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.80523681640625	2	478.803626	955.592698	-1.2382	-0.00059286	4.3011	0.0020594	3.0629	0.0014665	478.80558529591235	40.624	1.0284	40.581	39.923	40.951	-0.042892					45	26	2	0	0	0	0.8347	1	2909	2909		23.042	1.0826	1	267990			46330	2727	31150	31163	52338	52338					0.11312575153931448
QTRALLRV	8	Unmodified	_QTRALLRV_					0	0	0		ENSG00000113555|ENST00000231484|PCDH12	ENSG00000113555|ENST00000231484|PCDH12	ENSG00000113555|ENST00000231484|PCDH12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.80743408203125	2	478.803626	955.592698	0.24724	0.00011838	4.3933	0.0021035	4.6405	0.0022219	478.8055593968592	41.183	1.271	41.256	40.938	42.209	0.073414					62	33	2	0	0	0	0.87479	1	2777	2777		30.504	2.6214	1	199990			46331	2727	31150	31163	52339	52339					0.11312575153931448
QTRKKKGG	8	Unmodified	_QTRKKKGG_					0	0	0		nc|ENSG00000165288|Q6RI45-5|BRWD3;ENSG00000165288|ENST00000373275|BRWD3;ENST00000473691.1_1_X:79938122-79975072:-|nuORF;nc|ENSG00000165288|Q6RI45-3|BRWD3;nc|ENSG00000165288|Q6RI45-4|BRWD3;nc|ENSG00000165288|Q6RI45-2|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.78009033203125	2	451.780151	901.545748	0.99248	0.00044838	-1.1508	-0.00051993	-0.15836	-7.1544E-05	451.77963856381217	86.78	1.6717	86.706	86.227	87.899	-0.074005					91	38	4	0	0	0	0.91472	1	8990	8990		44.117	12.587	1	335390			46332	6069	31151	31164	52340	52340					0.09103715602805096
QTRLHASA	8	Unmodified	_QTRLHASA_					0	0	0		ENST00000567385.5_1_16:48265837-48278487:-|nuORF	ENST00000567385.5_1_16:48265837-48278487:-|nuORF	ENST00000567385.5_1_16:48265837-48278487:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2407531738281	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.87064	1	7900	7900		29.15	1.2673	1	1094000			46333	13948	31152	31165	52341	52341					0.021228632976999506
QTRLHASA	8	Unmodified	_QTRLHASA_					0	0	0		ENST00000567385.5_1_16:48265837-48278487:-|nuORF	ENST00000567385.5_1_16:48265837-48278487:-|nuORF	ENST00000567385.5_1_16:48265837-48278487:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2406921386719	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.91472	1	7739	7739		44.117	6.9577	1	968500			46334	13948	31152	31165	52342	52342					0.021228632976999506
QTRRRLWGEG	10	Unmodified	_QTRRRLWGEG_					0	0	0			REV__ENST00000340611.8_1_7:2594013-2595160:-|nuORF	REV__ENST00000340611.8_1_7:2594013-2595160:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.9156799316406	3	420.230294	1257.66905	-0.48686	-0.00020459	-0.4136	-0.00017381	-0.90046	-0.0003784	420.23024281598094	29.912	0.38947	29.941	29.618	30.008	0.028618					11	8	2	0	0	0	0.37624	1	1895	1895		20.03	10.384	1	33888	+		46335	25247	31153	31166	52343	52343					0.05052346983256939
QTRRVSLKKH	10	Unmodified	_QTRRVSLKKH_					0	0	0		ENST00000533558.5_1_11:7689723-7689786:-|nuORF	ENST00000533558.5_1_11:7689723-7689786:-|nuORF	ENST00000533558.5_1_11:7689723-7689786:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.2978210449219	3	418.258072	1251.75239	0.33004	0.00013804	-3.5687	-0.0014927	-3.2387	-0.0013546	418.25743217166774	55.954	0.15674	56.054	55.97	56.127	0.09919					6	4	2	0	0	0	0.37624	1	4712	4712		20.03	0.7678	1	29928			46336	13397	31154	31167	52344	52344					0.13658083431141677
QTRVAGCLAL	10	Unmodified	_QTRVAGCLAL_					0	0	0		ENST00000569733.6_1_16:67575293-67580037:+|nuORF;ENSG00000039523|ENST00000042381|RIPOR1;nc|ENSG00000039523|Q6ZS17|RIPOR1;nc|ENSG00000039523|Q6ZS17-3|RIPOR1;nc|ENSG00000039523|Q6ZS17-4|RIPOR1	ENST00000569733.6_1_16:67575293-67580037:+|nuORF	ENST00000569733.6_1_16:67575293-67580037:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.2860107421875	2	516.286951	1030.55935	0.24047	0.00012415	-3.8811	-0.0020038	-3.6406	-0.0018796	516.2850805411663	36.613	0.69756	36.716	36.464	37.161	0.10306					35	19	3	0	0	0	0.70553	1	2043	2043		44.377	5.1244	1	162020			46337	923	31155	31168	52345	52345					0.04529205319727225
QTRVAGCLAL	10	Unmodified	_QTRVAGCLAL_					0	0	0		ENST00000569733.6_1_16:67575293-67580037:+|nuORF;ENSG00000039523|ENST00000042381|RIPOR1;nc|ENSG00000039523|Q6ZS17|RIPOR1;nc|ENSG00000039523|Q6ZS17-3|RIPOR1;nc|ENSG00000039523|Q6ZS17-4|RIPOR1	ENST00000569733.6_1_16:67575293-67580037:+|nuORF	ENST00000569733.6_1_16:67575293-67580037:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	516.286951	1030.55935	-0.37558	-0.00019391	-2.9349	-0.0015152	-3.3105	-0.0017091	516.2854646272209	36.825	0.56328	36.848	36.588	37.151	0.023624	0.078833	0.00045799	NaN	44.377	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135490			46338	923	31155	31168							0.04529205319727225
QTSIVAAQMF	10	Oxidation (M)	_QTSIVAAQM(Oxidation (M))F_		QTSIVAAQM(1)F		QTSIVAAQM(58)F	0	0	1		nc|ENSG00000142197|Q9Y3R5-2|DOP1B;ENSG00000142197|ENST00000691173|DOP1B	nc|ENSG00000142197|Q9Y3R5-2|DOP1B	nc|ENSG00000142197|Q9Y3R5-2|DOP1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.2775268554688	2	556.276249	1110.53795	0.065676	3.6534E-05	-2.455	-0.0013657	-2.3893	-0.0013291	556.274462722407	64.264	1.6945	64.818	63.96	65.654	0.55386					83	40	3	0	0	0	0.47091	1	6951	6951		58.23	6.8945	1	796650			46339	4548	31156	31169	52346	52346		81			-0.012902244996666923
QTSLKGLLK	9	Unmodified	_QTSLKGLLK_					0	0	0			REV__ENSG00000112159|ENST00000369393|MDN1	REV__ENSG00000112159|ENST00000369393|MDN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.3133850097656	2	494.313492	986.612431	0.17117	8.4609E-05	-0.39231	-0.00019392	-0.22114	-0.00010931	494.31315315762487	34.223	0.70489	34.433	34.149	34.854	0.21003					42	16	4	0	0	0	0.26953	1	2541	2541		67.494	3.2864	1	1501200	+		46340	17920	31157	31170	52347	52347					0.11858906374050093
QTSLTLVVK	9	Unmodified	_QTSLTLVVK_					0	0	0			REV__ENSG00000112379|ENST00000251691|ARFGEF3	REV__ENSG00000112379|ENST00000251691|ARFGEF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.9548034667969	2	494.8055	987.596446	-0.073795	-3.6514E-05	0.070331	3.48E-05	-0.0034641	-1.7141E-06	494.8055268269524	30.694	0.39247	30.698	30.535	30.928	0.0037212					12	8	2	0	0	0	0.20789	1	2057	2057		14.865	0	1	83041	+		46341	17944	31158	31171	52348	52348					0.10215200137133706
QTSMRKTL	8	Oxidation (M)	_QTSM(Oxidation (M))RKTL_		QTSM(1)RKTL		QTSM(70)RKTL	0	0	1			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	490.7603759765625	2	490.763309	979.512065	-1.2394	-0.00060824	-2.4396	-0.0011973	-3.679	-0.0018055	490.76200800927813	19.579	0.44814	19.509	19.285	19.733	-0.070013					29	16	2	0	0	0	0.64455	1	434	434		69.628	7.5202	1	64072	+		46342	29599	31159	31172	52349	52349		431			0.021489260487442152
QTSMRKTL	8	Oxidation (M)	_QTSM(Oxidation (M))RKTL_					0	0	1			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	490.763309	979.512065	0.072304	3.5484E-05	-3.543	-0.0017388	-3.4707	-0.0017033	490.76144610091643	19.273	0.36556	19.344	19.143	19.508	0.070713	-0.019183	8.5539E-05	NaN	69.628	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112670	+		46343	29599	31159	31172				431			0.021489260487442152
QTSMRKTL	8	Oxidation (M)	_QTSM(Oxidation (M))RKTL_					0	0	1			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|79|2|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	490.763309	979.512065	0.74001	0.00036317	-4.3407	-0.0021302	-3.6006	-0.0017671	490.76106946896465	19.338	0.39302	19.314	19.128	19.521	-0.023342	-0.048421	-0.00069734	NaN	69.628	28	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110910	+		46344	29599	31159	31172				431			0.021489260487442152
QTSPFGVEWF	10	Unmodified	_QTSPFGVEWF_					0	0	0			REV__nc|ENSG00000101773|Q99708-2|RBBP8	REV__nc|ENSG00000101773|Q99708-2|RBBP8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	599.2811279296875	2	599.282389	1196.55022	-1.091	-0.00065384	-0.044874	-2.6892E-05	-1.1359	-0.00068073	599.2821324751964	41.641	0.81788	41.641	41.328	42.145	0					53	19	4	0	0	0	0.4892	1	2834	2834		56.721	9.0637	1	755210	+		46345	17302	31160	31173	52350	52350					-0.04018864764952923
QTSPTRAH	8	Unmodified	_QTSPTRAH_					0	0	0		ENST00000563837.1_1_16:1027070-1031229:-|nuORF	ENST00000563837.1_1_16:1027070-1031229:-|nuORF	ENST00000563837.1_1_16:1027070-1031229:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2325439453125	2	449.230491	896.446428	-1.2863	-0.00057784	1.5021	0.0006748	0.21583	9.6958E-05	449.2311264032564	83.242	4.4752	83.407	81.466	85.941	0.1651					199	104	3	0	0	0	0.84579	1	8035	8035		24.519	1.4767	1	231800			46346	13876	31161	31174	52351	52351					-0.0059372708195724044
QTSQKKKKS	9	Unmodified	_QTSQKKKKS_					0	0	0		MER4-int_dup2456|chr14:101678431-101679440:-|1.249631700700766|0.067251674876087|4.22|63.0|43|1|anti-sense	MER4-int_dup2456|chr14:101678431-101679440:-|1.249631700700766|0.067251674876087|4.22|63.0|43|1|anti-sense	MER4-int_dup2456|chr14:101678431-101679440:-|1.249631700700766|0.067251674876087|4.22|63.0|43|1|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8171997070312	2	531.81693	1061.61931	1.2435	0.00066132	-1.012	-0.00053822	0.23146	0.00012309	531.8162466604691	101.09	1.2403	101.14	100.73	101.97	0.044823					55	29	3	0	0	0	0.7932	1	10862	10862		17.365	1.7232	1	527610			46347	14715	31162	31175	52352	52352					0.0909621925461579
QTSSLPLL	8	Unmodified	_QTSSLPLL_					0	0	0			REV__ENSG00000261150|ENST00000615648|EPPK1	REV__ENSG00000261150|ENST00000615648|EPPK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.74871826171875	2	429.750193	857.485833	-1.2651	-0.00054369	0.44911	0.000193	-0.81601	-0.00035068	429.7502304021701	40.953	2.5169	41.587	40.841	43.358	0.6339					165	67	3	0	0	0	0.90465	1	3616	3616		40.573	3.4135	1	8697100	+		46348	23941	31163	31176	52353	52353					0.05138980148910832
QTTDLGSSKNT	11	Unmodified	_QTTDLGSSKNT_					0	0	0		L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|24|1|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|24|1|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|24|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.310302734375	2	576.280574	1150.5466	-0.39373	-0.0002269	-4.1027	-0.0023643	-4.4964	-0.0025912	576.2778549162316	53.639	0.66695	54.052	53.786	54.453	0.4139					31	15	3	0	0	0	0.17415	1	5467	5467		15.333	3.6972	1	285780			46349	14591	31164	31177	52354	52354					-0.022655793294461546
QTTRGFGALPT	11	Unmodified	_QTTRGFGALPT_					0	0	0			REV__ENST00000372409.7_1_20:44572315-44574382:+|nuORF	REV__ENST00000372409.7_1_20:44572315-44574382:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.8065795898438	2	574.806562	1147.59857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.476	1	33.688	33.188	34.188	0.21168								0	0	0	0.33258	1	2432	2432		72.879	16.158	1		+		46350	25719	31165	31178	52355	52355					0.030676288749418745
QTVFLQRRY	9	Unmodified	_QTVFLQRRY_					0	0	0		ENSG00000183128|ENST00000369783|CALHM3	ENSG00000183128|ENST00000369783|CALHM3	ENSG00000183128|ENST00000369783|CALHM3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.76092529296875	3	404.22789	1209.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.009	1	66.139	65.639	66.639	0.12996								0	0	0	0.28889	1	5847	5847		35.152	4.5832	1				46351	7503	31166	31179	52356	52356					0.06539614382859327
QTVKLQLPQRL	11	Unmodified	_QTVKLQLPQRL_					0	0	0		ENST00000271450.10_1_1:161475779-161476144:+|nuORF	ENST00000271450.10_1_1:161475779-161476144:+|nuORF	ENST00000271450.10_1_1:161475779-161476144:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.940185546875	3	441.94175	1322.80342	-0.67661	-0.00029902	-3.8568	-0.0017045	-4.5334	-0.0020035	441.93996604387434	56.404	1.0058	56.378	55.754	56.759	-0.026108					84	47	2	0	0	0	0.75457	1	4723	4723		21.032	6.2534	1	784320			46352	9561	31167	31180	52357	52357					0.15492987685320259
QTVLTVTQT	9	Unmodified	_QTVLTVTQT_					0	0	0			REV__nc|ENSG00000198947|P11532-4|DMD	REV__nc|ENSG00000198947|P11532-4|DMD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7732849121094	2	495.776939	989.539325	-0.23378	-0.0001159	-0.52318	-0.00025938	-0.75695	-0.00037528	495.77653465411356	21.443	0.64695	20.815	20.586	21.233	-0.62835					20	15	2	0	0	0	0.41566	1	786	786		56.721	0.28726	1	79624	+		46353	23425	31168	31181	52358	52358					0.04413732860757591
QTVLTVTQT	9	Unmodified	_QTVLTVTQT_					0	0	0			REV__nc|ENSG00000198947|P11532-4|DMD	REV__nc|ENSG00000198947|P11532-4|DMD	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	495.776939	989.539325	0.28176	0.00013969	-0.33512	-0.00016614	-0.053362	-2.6456E-05	495.7766176443139	21.291	0.47341	20.848	20.596	21.069	-0.44324	0.01633	0.00010019	NaN	56.721	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66518	+		46354	23425	31168	31181							0.04413732860757591
QTVLTVTQT	9	Unmodified	_QTVLTVTQT_					0	0	0			REV__nc|ENSG00000198947|P11532-4|DMD	REV__nc|ENSG00000198947|P11532-4|DMD	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	495.776939	989.539325	-0.23378	-0.0001159	-0.52318	-0.00025938	-0.75695	-0.00037528	495.77653465411356	21.443	0.64695	20.815	20.586	21.233	-0.62835	-0.01633	-8.6279E-05	NaN	56.721	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79624	+		46355	23425	31168	31181							0.04413732860757591
QTVRHSPSF	9	Unmodified	_QTVRHSPSF_					0	0	0		ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.7708129882812	2	529.772522	1057.53049	-0.036559	-1.9368E-05	-3.2858	-0.0017407	-3.3224	-0.0017601	529.7704330502653	67.363	0.60791	67.38	67.138	67.745	0.016205					60	26	3	0	0	0	0.68711	1	6341	6341		41.427	2.6205	1	307260			46356	7216	31169	31182	52359	52359					0.004028040149478329
QTVTAPQSPY	10	Unmodified	_QTVTAPQSPY_					0	0	0			REV__ENSG00000138279|ENST00000372921|ANXA7	REV__ENSG00000138279|ENST00000372921|ANXA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.2650146484375	2	546.272021	1090.52949	0.53485	0.00029217	-0.23872	-0.00013041	0.29612	0.00016176	546.7737297993075	31.293	0.29089	31.283	31.137	31.428	-0.010656					11	6	2	0	0	0	0.86587	1	1703	1703		29.17	1.2878	1	32217	+		46357	19454	31170	31183	52360	52360					-0.012154551446201367
QTVVLQVRPHS	11	Unmodified	_QTVVLQVRPHS_					0	0	0		ENST00000415764.5_1_22:21822705-21823352:+|nuORF;ENST00000414022.5_1_22:21057767-21058517:+|nuORF;ENST00000452055.5_2_22:21057761-21058605:+|nuORF;ENST00000422715.1_1_22:21057767-21058517:+|nuORF;ENST00000445836.5_2_22:21057761-21058775:+|nuORF;nc|ENSG00000206140|A6NGB0-1|TMEM191C;ENSG00000278558|ENST00000612978|TMEM191B	ENST00000415764.5_1_22:21822705-21823352:+|nuORF	ENST00000415764.5_1_22:21822705-21823352:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	632.3626098632812	2	632.362036	1262.70952	-0.16064	-0.00010158	-1.4238	-0.00090034	-1.5844	-0.0010019	632.3610607095746	103.11	0.60912	103.12	102.83	103.44	0.0082016					44	14	4	0	0	0	0.51007	1	11080	11080		51.193	6.8155	1	4561200			46358	9033	31171	31184	52361	52361					0.08867268583026089
QTVVLQVRPHS	11	Unmodified	_QTVVLQVRPHS_					0	0	0		ENST00000415764.5_1_22:21822705-21823352:+|nuORF;ENST00000414022.5_1_22:21057767-21058517:+|nuORF;ENST00000452055.5_2_22:21057761-21058605:+|nuORF;ENST00000422715.1_1_22:21057767-21058517:+|nuORF;ENST00000445836.5_2_22:21057761-21058775:+|nuORF;nc|ENSG00000206140|A6NGB0-1|TMEM191C;ENSG00000278558|ENST00000612978|TMEM191B	ENST00000415764.5_1_22:21822705-21823352:+|nuORF	ENST00000415764.5_1_22:21822705-21823352:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	632.3646240234375	2	632.362036	1262.70952	-1.1839	-0.00074864	-0.092284	-5.8357E-05	-1.2762	-0.000807	632.3616057727943	102.98	0.994	103.09	102.39	103.39	0.11495					58	24	4	0	0	0	0.58425	1	10818	10818		45.972	5.1941	1	10467000			46359	9033	31171	31184	52362	52362					0.08867268583026089
QTVYHFGTE	9	Unmodified	_QTVYHFGTE_					0	0	0			REV__chr19:46121210-46123886|26|42.62|0.01|11.83|-|2|None,IGFL3|1	REV__chr19:46121210-46123886|26|42.62|0.01|11.83|-|2|None,IGFL3|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.83740234375	2	541.251089	1080.48762	1.064	0.00057587	-2.6849	-0.0014532	-1.6209	-0.00087731	541.2495520871418	35.727	0.22277	36.168	36.036	36.259	0.44043					6	5	2	0	0	0	0.20789	1	2777	2777		26.693	8.3685	1	64593	+		46360	15711	31172	31185	52363	52363					-0.04940010833138331
QTWNKTVPLQ	10	Unmodified	_QTWNKTVPLQ_					0	0	0		nc|ENSG00000144451|Q8N0X2-5|SPAG16	nc|ENSG00000144451|Q8N0X2-5|SPAG16	nc|ENSG00000144451|Q8N0X2-5|SPAG16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	607.8291015625	2	607.830037	1213.64552	1.0045	0.00061057	-2.9844	-0.001814	-1.9799	-0.0012034	607.8282661778062	16.583	0.27672	16.096	15.959	16.236	-0.48718					11	5	3	0	0	0	0.67571	1	151	151		45.972	3.108	1	94521			46361	14974	31173	31186	52364	52364					0.04724488426086282
QTWNKTVPLQ	10	Unmodified	_QTWNKTVPLQ_					0	0	0		nc|ENSG00000144451|Q8N0X2-5|SPAG16	nc|ENSG00000144451|Q8N0X2-5|SPAG16	nc|ENSG00000144451|Q8N0X2-5|SPAG16	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	607.830037	1213.64552	0.47284	0.00028741	-2.1572	-0.0013112	-1.6843	-0.0010238	607.8286969893154	16.589	0.41359	15.99	15.74	16.154	-0.59873	-0.053146	0.00069795	NaN	45.972	13	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125410			46362	14974	31173	31186							0.04724488426086282
QTYVGITEK	9	Unmodified	_QTYVGITEK_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.77685546875	2	519.776939	1037.53933	0.44867	0.00023321	-0.56831	-0.00029539	-0.11964	-6.2184E-05	519.7765910851372	37.868	1.2542	38.181	37.825	39.079	0.31312					91	31	4	0	0	0	0.085559	4	3053	3053;3064;3073;3086		96.034	18.716	1	9376000			46363	4683	31174	31187	52365;52366;52367;52368	52365					0.022057328607616
QTYVGITEK	9	Unmodified	_QTYVGITEK_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.7767333984375	2	519.776939	1037.53933	0.15994	8.3135E-05	-0.28864	-0.00015003	-0.12869	-6.6891E-05	519.7767309231349	37.741	1.4659	38.263	37.945	39.411	0.52224					99	36	5	0	0	0	0.065543	4	3062	3051;3062;3086;3099		101.46	21.747	1	9176300			46364	4683	31174	31187	52369;52370;52371;52372	52370					0.022057328607616
QVAAWDATSIY	11	Unmodified	_QVAAWDATSIY_					0	0	0			REV__ENST00000523028.5_1_16:21892164-21910369:-|nuORF	REV__ENST00000523028.5_1_16:21892164-21910369:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.7981567382812	2	612.798403	1223.58225	0.49678	0.00030443	-0.92271	-0.00056543	-0.42592	-0.000261	612.79773543131	60.179	1.1342	60.147	59.804	60.939	-0.031727					87	31	4	0	0	0	0.67778	1	5722	5722		35.152	4.8343	1	1989600	+		46365	24874	31175	31188	52373	52373					-0.020594970817910507
QVACSPLYPL	10	Unmodified	_QVACSPLYPL_					0	0	0			REV__ENST00000530213.5_1_11:64809351-64812196:+|nuORF	REV__ENST00000530213.5_1_11:64809351-64812196:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.1627807617188	2	545.78371	1089.55287	-1.4266	-0.00077863	1.2666	0.00069126	-0.16007	-8.7366E-05	545.7841748514728	39.202	0.82422	39.757	39.401	40.225	0.55449					30	18	2	0	0	0	0.37624	1	3272	3272		58.23	19.424	1	112880	+		46366	21456	31176	31189	52374	52374					0.011672673683506218
QVAFRPVLP	9	Unmodified	_QVAFRPVLP_					0	0	0		nc|ENSG00000142609|Q9C0B2|CFAP74;ENSG00000142609|ENST00000682832|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.80908203125	2	513.808377	1025.6022	-0.47161	-0.00024232	1.6041	0.00082419	1.1325	0.00058187	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.78058	2	4029	4017;4029		30.504	10.022	1	1552900			46367	4573	31177	31190	52375;52376	52376					0.09042343439477918
QVAFRPVLP	9	Unmodified	_QVAFRPVLP_					0	0	0		nc|ENSG00000142609|Q9C0B2|CFAP74;ENSG00000142609|ENST00000682832|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8097534179688	2	513.808377	1025.6022	-0.22351	-0.00011484	1.6547	0.00085019	1.4312	0.00073535	513.8091977878661	50.938	0.75373	50.946	50.757	51.511	0.0077438					49	23	3	0	0	0	0.74721	1	4433	4433		37.159	1.9584	1	174420			46368	4573	31177	31190	52377	52377					0.09042343439477918
QVAFRPVLP	9	Unmodified	_QVAFRPVLP_					0	0	0		nc|ENSG00000142609|Q9C0B2|CFAP74;ENSG00000142609|ENST00000682832|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	nc|ENSG00000142609|Q9C0B2|CFAP74	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.8079223632812	2	513.808377	1025.6022	-0.47838	-0.0002458	1.7183	0.00088287	1.2399	0.00063707	513.8090681534527	46.11	2.0095	46.581	45.725	47.735	0.47139					108	48	3	0	0	0	0.78983	2	4323	4323;4346		27.882	2.4321	1	5264100			46369	4573	31177	31190	52378;52379	52378					0.09042343439477918
QVAKEYRKR	9	Unmodified	_QVAKEYRKR_					0	0	0			REV__ENSG00000135205|ENST00000285871|CCDC146	REV__ENSG00000135205|ENST00000285871|CCDC146	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.34326171875	2	589.343646	1176.67274	0.66189	0.00039008	-1.7255	-0.0010169	-1.0636	-0.00062683	589.3425006699924	91.235	1.3572	91.685	90.611	91.968	0.44958					101	32	4	0	0	0	0.76764	1	10814	10814		34.173	1.3601	1	1778100	+		46370	19198	31178	31191	52380	52380					0.09147016757128767
QVALQSKGHLL	11	Unmodified	_QVALQSKGHLL_					0	0	0			REV__nc|ENSG00000197847|A6NK97|SLC22A20P	REV__nc|ENSG00000197847|A6NK97|SLC22A20P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8558959960938	2	597.35368	1192.69281	2.4166	0.0014436	0.49195	0.00029387	2.9086	0.0017374	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.70737	1	9971	9971		30.318	0	1	8047600	+		46371	30141	31179	31192	52381	52381					0.10416767697097384
QVALQSKGHLL	11	Unmodified	_QVALQSKGHLL_					0	0	0			REV__nc|ENSG00000197847|A6NK97|SLC22A20P	REV__nc|ENSG00000197847|A6NK97|SLC22A20P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8561401367188	2	597.35368	1192.69281	0.9357	0.00055895	2.5932	0.001549	3.5289	0.002108	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.67778	1	9732	9732		35.152	2.3396	1	19058000	+		46372	30141	31179	31192	52382	52382					0.10416767697097384
QVANKNVAK	9	Unmodified	_QVANKNVAK_					0	0	0		nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2;ENSG00000143514|ENST00000343537|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.28497314453125	2	486.285266	970.555979	-0.13669	-6.6471E-05	-0.015348	-7.4634E-06	-0.15204	-7.3935E-05	486.2851393074563	21.327	0.89202	20.699	20.296	21.188	-0.62835					49	23	3	0	0	0	0.25483	1	756	756		68.787	19.251	1	587940			46373	4640	31180	31193	52383	52383					0.06952278537369239
QVANKNVAK	9	Unmodified	_QVANKNVAK_					0	0	0		nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2;ENSG00000143514|ENST00000343537|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	486.285266	970.555979	0.9408	0.0004575	-0.69386	-0.00033742	0.24694	0.00012008	486.2848554364236	20.479	0.56533	20.55	20.31	20.875	0.071127	-0.16895	-0.00069441	NaN	68.787	50	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72900			46374	4640	31180	31193							0.06952278537369239
QVANKNVAK	9	Unmodified	_QVANKNVAK_					0	0	0		nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2;ENSG00000143514|ENST00000343537|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	486.285266	970.555979	-0.27857	-0.00013546	1.1507	0.00055958	0.87216	0.00042412	486.2858384161069	20.919	0.81981	20.855	20.295	21.115	-0.064743	0.13539	0.0010996	NaN	68.787	53	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96498			46375	4640	31180	31193							0.06952278537369239
QVANKNVAK	9	Unmodified	_QVANKNVAK_					0	0	0		nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2;ENSG00000143514|ENST00000343537|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	486.285266	970.555979	-1.1657	-0.00056688	1.3984	0.00068	0.23262	0.00011312	486.28587953453547	20.862	0.56899	20.798	20.578	21.147	-0.064058	0.078426	0.0013404	NaN	68.787	43	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81917			46376	4640	31180	31193							0.06952278537369239
QVANKNVAK	9	Unmodified	_QVANKNVAK_					0	0	0		nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2;ENSG00000143514|ENST00000343537|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	486.285266	970.555979	0.72911	0.00035455	-0.6783	-0.00032984	0.050811	2.4708E-05	486.28478226988574	21.154	0.84931	20.695	20.28	21.129	-0.4591	-0.024404	-0.00067927	NaN	68.787	41	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	483010			46377	4640	31180	31193							0.06952278537369239
QVARHSLGRYG	11	Unmodified	_QVARHSLGRYG_					0	0	0			REV__chr19:46120320-46123886|33|109.58|0.18|9.23|-|0|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120320|None,IGFL3|4	REV__chr19:46120320-46123886|33|109.58|0.18|9.23|-|0|TE_info:LTR1E,LTR1E_dup286,ERV1,LTR,acceptor,-,46119705,46120320|None,IGFL3|4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3362426757812	2	622.336353	1242.65815	0.74466	0.00046343	-0.51938	-0.00032323	0.22528	0.0001402	622.3359336056161	110.94	1.6886	110.97	110.28	111.96	0.031738					155	57	4	0	0	0	0.70278	1	12190	12190		21.686	2.5822	1	299380	+		46378	15709	31181	31194	52384	52384					0.046529446090062265
QVASALRPHHS	11	Unmodified	_QVASALRPHHS_					0	0	0			REV__ENSG00000148513|ENST00000361713|ANKRD30A	REV__ENSG00000148513|ENST00000361713|ANKRD30A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	601.2985229492188	2	601.823078	1201.6316	-0.4375	-0.0002633	-3.8486	-0.0023162	-4.2861	-0.0025795	601.822151416384	58.221	0.16968	58.613	58.482	58.651	0.39209					5	3	2	0	0	0	0.17339	1	6073	6073		19.263	0	1	73155	+		46379	20121	31182	31195	52385	52385					0.03885255717682412
QVATRTPMR	9	Unmodified	_QVATRTPMR_					0	0	0			REV__ENST00000592220.1_1_19:34917242-34919163:-|nuORF	REV__ENST00000592220.1_1_19:34917242-34919163:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2669677734375	2	530.290025	1058.5655	-0.7744	-0.00041066	-2.9481	-0.0015634	-3.7225	-0.001974	530.7896941494279	45.066	0.28686	45.91	45.708	45.995	0.84438					11	6	2	0	0	0	0.20789	1	4155	4155		34.173	17.699	1	138550	+		46380	29209	31183	31196	52386	52386					0.038557235512371335
QVAVRVRPLSK	11	Unmodified	_QVAVRVRPLSK_					0	0	0		ENSG00000159433|ENST00000290607|STARD9;nc|ENSG00000159433|Q9P2P6-2|STARD9;ENST00000564158.5_1_15:42867889-42955097:+|nuORF;ENST00000563872.5_1_15:42867889-42930286:+|nuORF	ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.2642822265625	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.583	1	48.583	48.083	49.083	0								0	0	0	0.56276	1	3779	3779		23.514	3.4839	1				46381	5530	31184	31197	52387	52387					0.16172138233696387
QVAWAPNN	8	Unmodified	_QVAWAPNN_					0	0	0			REV__nc|ENSG00000168995|Q9Y286-4|SIGLEC7	REV__nc|ENSG00000168995|Q9Y286-4|SIGLEC7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2633056640625	2	450.222134	898.429715	0.42309	0.00019048	-1.424	-0.00064113	-1.0009	-0.00045065	450.2210977005411	29.862	0.30136	29.773	29.532	29.833	-0.089544					9	6	2	0	0	0	0.4196	1	1918	1918		33.516	3.0119	1	35876	+		46382	21539	31185	31198	52388	52388					-0.023562279679140374
QVCHPHRI	8	Unmodified	_QVCHPHRI_					0	0	0		nc|ENSG00000180113|O60522-2|TDRD6;ENSG00000180113|ENST00000316081|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2598876953125	2	495.258528	988.502503	1.1508	0.00056992	1.9093	0.00094561	3.0601	0.0015155	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.92457	1	2752	2752		47.916	3.7988	1	3842700			46383	7314	31186	31199	52389	52389					0.007792025538719827
QVCVRPATRLH	11	Unmodified	_QVCVRPATRLH_					0	0	0			REV__ENST00000607711.1_1_6:15244923-15245223:-|nuORF	REV__ENST00000607711.1_1_6:15244923-15245223:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3594360351562	2	640.356231	1278.69791	1.6035	0.0010268	2.5133	0.0016094	4.1168	0.0026362	640.3577368030512	99.407	2.6879	99.454	98.409	101.1	0.047531					162	62	4	0	0	0	0.7144	1	10627	10627		29.17	3.596	1	584870	+		46384	29389	31187	31200	52390	52390					0.0697074828804034
QVDASRAR	8	Unmodified	_QVDASRAR_					0	0	0			REV__nc|ENSG00000179240|Q3ZCU0|GVQW3	REV__nc|ENSG00000179240|Q3ZCU0|GVQW3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7615051269531	2	451.743765	901.472977	0.015985	7.2211E-06	-3.1544	-0.001425	-3.1384	-0.0014178	451.7418161498455	37.76	0.27122	37.702	37.507	37.779	-0.057915					13	10	2	0	0	0	0.4196	1	2161	2161		35.618	11.416	1	39271	+		46385	30065	31188	31201	52391	52391					0.018299618093692516
QVDKNFLKAEK	11	Unmodified	_QVDKNFLKAEK_					0	0	0		nc|ENSG00000188554|Q14596-2|NBR1;ENSG00000188554|ENST00000590996|NBR1	nc|ENSG00000188554|Q14596-2|NBR1	nc|ENSG00000188554|Q14596-2|NBR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.2528381347656	3	440.58211	1318.7245	-0.21047	-9.2728E-05	0.26445	0.00011651	0.053981	2.3783E-05	440.5821880345176	25.962	0.69491	25.704	25.383	26.078	-0.2572					26	15	2	0	0	0	0.1746	1	1387	1387		24.276	2.4955	1	261060			46386	7935	31189	31202	52392	52392					0.0778871566037651
QVEELLCNL	9	Unmodified	_QVEELLCNL_					0	0	0		nc|ENSG00000107099|Q8NF50-4|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;ENSG00000107099|ENST00000432829|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.3057861328125	2	530.7708	1059.52705	1.0771	0.0005717	4.4752	0.0023753	5.5523	0.002947	530.7733800164098	33.697	0.20471	34.002	33.871	34.076	0.30495					6	4	2	0	0	0	0.20789	1	2473	2473		42.396	0	1	46571			46387	2330	31190	31203	52393	52393					-0.00033626873914727184
QVELQFQLN	9	Unmodified	_QVELQFQLN_					0	0	0		ENSG00000198265|ENST00000358691|HELZ;nc|ENSG00000198265|P42694-2|HELZ	ENSG00000198265|ENST00000358691|HELZ	ENSG00000198265|ENST00000358691|HELZ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.3523559570312	2	559.795663	1117.57677	-0.24821	-0.00013895	0.57609	0.00032249	0.32788	0.00018354	559.795956741108	53.74	0.46216	54.325	54.123	54.585	0.58474					14	10	2	0	0	0	0.20789	1	5491	5491		19.104	0	1	115060			46388	8260	31191	31204	52394	52394					0.022688241263722375
QVEMGRQI	8	Unmodified	_QVEMGRQI_					0	0	0			REV__ENSG00000198576|ENST00000356613|ARC	REV__ENSG00000198576|ENST00000356613|ARC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.7903747558594	2	480.750201	959.48585	1.0908	0.0005244	-1.4783	-0.00071067	-0.38747	-0.00018628	480.74958390573244	23.245	0.50618	22.827	22.61	23.116	-0.41879					24	11	3	0	0	0	0.4196	1	1016	1016		42.396	0	1	56787	+		46389	23341	31192	31205	52395	52395					0.0044865687726769465
QVEYYRYIRFF	11	Unmodified	_QVEYYRYIRFF_					0	0	0		nc|ENSG00000112146|Q9UK97-3|FBXO9;ENSG00000112146|ENST00000323557|FBXO9;nc|ENSG00000112146|Q9UK97|FBXO9	nc|ENSG00000112146|Q9UK97-3|FBXO9	nc|ENSG00000112146|Q9UK97-3|FBXO9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.385498046875	3	528.605026	1582.79325	0.7376	0.0003899	2.3449	0.0012395	3.0825	0.0016294	528.6068695088344	24.491	0.26601	24.505	24.359	24.625	0.013996					13	12	2	0	0	0	0.18131	1	825	825		12.957	7.2587	1	44361			46390	2635	31193	31206	52396	52396					0.025163799600477432
QVEYYRYIRFF	11	Unmodified	_QVEYYRYIRFF_					0	0	0		nc|ENSG00000112146|Q9UK97-3|FBXO9;ENSG00000112146|ENST00000323557|FBXO9;nc|ENSG00000112146|Q9UK97|FBXO9	nc|ENSG00000112146|Q9UK97-3|FBXO9	nc|ENSG00000112146|Q9UK97-3|FBXO9	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	528.605026	1582.79325	0.14193	7.5027E-05	4.8907	0.0025853	5.0327	0.0026603	528.6076231681421	24.401	0.095469	24.502	24.465	24.56	0.10045	-0.0018513	0.0019111	NaN	12.957	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106500			46391	2635	31193	31206							0.025163799600477432
QVFGLLIIL	9	Unmodified	_QVFGLLIIL_					0	0	0			REV__ENSG00000103257|ENST00000261622|SLC7A5	REV__ENSG00000103257|ENST00000261622|SLC7A5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8126525878906	2	508.331153	1014.64775	-0.71573	-0.00036383	3.653	0.0018569	2.9372	0.0014931	508.83509890378696	43.582	0.23633	44.032	43.963	44.2	0.45025					8	5	2	0	0	0	0.20789	1	3961	3961		20.482	0	1	394900	+		46392	17401	31194	31207	52397	52397					0.141015689018559
QVFKLLEIKT	10	Unmodified	_QVFKLLEIKT_					0	0	0			REV__ENSG00000097046|ENST00000234626|CDC7	REV__ENSG00000097046|ENST00000234626|CDC7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2481994628906	3	406.920063	1217.73836	-1.9265	-0.00078395	0.24073	9.7959E-05	-1.6858	-0.00068599	406.92169394027553	116.34	0.13084	116.27	116.2	116.33	-0.069672					4	2	2	0	0	0	0.37624	1	12493	12493		22.562	16.241	1	9357.2	+		46393	17081	31195	31208	52398	52398					0.13819993159427213
QVFLFLLFLAI	11	Unmodified	_QVFLFLLFLAI_					0	0	0		ENSG00000181698|ENST00000641665|OR5T1	ENSG00000181698|ENST00000641665|OR5T1	ENSG00000181698|ENST00000641665|OR5T1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9398498535156	3	441.940687	1322.80023	0.33265	0.00014701	-2.3466	-0.001037	-2.0139	-0.00089003	441.9395069624772	55.282	1.2267	55.373	54.736	55.962	0.091167					101	37	4	0	0	0	0.78391	1	4597	4597		14.694	0.60766	1	451030			46394	7399	31196	31209	52399	52399					0.1517434457859963
QVFLVTKREI	10	Unmodified	_QVFLVTKREI_					0	0	0			REV__ENST00000294008.3_1_16:3658980-3659088:-|nuORF	REV__ENST00000294008.3_1_16:3658980-3659088:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.5851135253906	3	411.583562	1231.72886	-0.064664	-2.6615E-05	1.4558	0.0005992	1.3912	0.00057259	411.58409479509044	21.479	1.1219	20.851	20.494	21.616	-0.62834					86	28	4	0	0	0	0.85692	1	825	825		36.318	4.6834	1	818940	+		46395	24689	31197	31210	52400	52400					0.12226224873938918
QVFQARLPY	9	Unmodified	_QVFQARLPY_					0	0	0		ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3032836914062	2	561.308741	1120.60293	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.332	1	55.733	55.233	56.233	0.40101								0	0	0	0.42198	1	5669	5669		57.811	11.839	1				46396	3006	31198	31211	52401	52401					0.047451380885149774
QVFQARLPY	9	Unmodified	_QVFQARLPY_					0	0	0		ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.304443359375	2	561.308741	1120.60293	0.39133	0.00021966	2.8329	0.0015901	3.2242	0.0018098	561.3093913762153	55.356	2.8595	55.925	53.691	56.55	0.56836					96	69	3	0	0	0	0.58151	1	5685	5685		47.916	3.3845	1	1532900			46397	3006	31198	31211	52402	52402					0.047451380885149774
QVFQMCNTLL	10	Oxidation (M)	_QVFQM(Oxidation (M))CNTLL_		QVFQM(1)CNTLL		QVFQM(57)CNTLL	0	0	1		ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF;ENST00000525056.1_1_11:108203545-108206748:+|nuORF	ENSG00000149311|ENST00000675843|ATM	ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	606.7882690429688	2	606.791209	1211.56787	0.067328	4.0854E-05	2.7072	0.0016427	2.7745	0.0016836	606.7928339427665	79.616	1.0594	80.166	79.743	80.802	0.54945					55	24	4	0	0	0	0.4892	1	9139	9139		56.721	7.2795	1	1142200			46398	5019	31199	31212	52403	52403		89			-0.029456088259621538
QVFQMITK	8	Unmodified	_QVFQMITK_					0	0	0		nc|ENSG00000118156|Q9H0D2-2|ZNF541;ENSG00000118156|ENST00000391901|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7706604003906	2	497.773145	993.531738	-0.46792	-0.00023292	-3.7013	-0.0018424	-4.1692	-0.0020753	497.7711513163207	26.209	0.8904	25.952	25.551	26.441	-0.25721					41	19	3	0	0	0	0.35525	3	1421	1398;1421;1433		101.6	7.1465	1	1659300			46399	3012	31200	31213	52404;52405;52406	52405					0.034713020594722366
QVFRKRATQ	9	Unmodified	_QVFRKRATQ_					0	0	0			REV__nc|ENSG00000122482|Q9H582-2|ZNF644	REV__nc|ENSG00000122482|Q9H582-2|ZNF644	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3294067382812	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.77244	1	11279	11279		32.812	0	1	6182600	+		46400	15459	31201	31214	52407	52407					0.08550747585650242
QVFVMNVDFTR	11	Unmodified	_QVFVMNVDFTR_					0	0	0		nc|ENSG00000184979|Q9UMW8-2|USP18;ENSG00000184979|ENST00000215794|USP18	nc|ENSG00000184979|Q9UMW8-2|USP18	nc|ENSG00000184979|Q9UMW8-2|USP18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.8975524902344	3	452.564062	1354.67036	-1.3471	-0.00060964	4.1874	0.001895	2.8403	0.0012854	452.5658003249651	17.807	0.44631	17.851	17.659	18.105	0.044048					52	22	4	0	0	0	0.62889	1	281	281		41.109	4.7913	1	420650			46401	7660	31202	31215	52408	52408					0.007208002371271505
QVFVMNVDFTR	11	Unmodified	_QVFVMNVDFTR_					0	0	0		nc|ENSG00000184979|Q9UMW8-2|USP18;ENSG00000184979|ENST00000215794|USP18	nc|ENSG00000184979|Q9UMW8-2|USP18	nc|ENSG00000184979|Q9UMW8-2|USP18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.8977355957031	3	452.564062	1354.67036	0.6163	0.00027892	2.3586	0.0010674	2.9749	0.0013463	452.5650072930857	17.725	0.36772	17.701	17.541	17.908	-0.024033					48	19	4	0	0	0	0.6593	1	260	260		37.6	6.5317	1	491340			46402	7660	31202	31215	52409	52409					0.007208002371271505
QVGAKPSLT	9	Unmodified	_QVGAKPSLT_					0	0	0			REV__ENST00000468260.5_2_16:175002-188644:-|nuORF	REV__ENST00000468260.5_2_16:175002-188644:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.7610168457031	2	450.761092	899.507631	-0.14597	-6.5799E-05	-0.36324	-0.00016374	-0.50922	-0.00022954	450.7611164931486	33.67	0.91978	33.84	33.399	34.319	0.16971					34	21	2	0	0	0	0.38563	1	2444	2444		58.782	3.2778	1	556190	+		46403	27179	31203	31216	52410	52410					0.053857848974644185
QVGGFVTPKI	10	Unmodified	_QVGGFVTPKI_					0	0	0			REV__ENSG00000137124|ENST00000377698|ALDH1B1	REV__ENSG00000137124|ENST00000377698|ALDH1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.86348	1	8596	8596		31.53	1.0262	1	12189000	+		46404	19362	31204	31217	52411	52411					0.0762661985700106
QVGGKRFEC	9	Unmodified	_QVGGKRFEC_					0	0	0		nc|ENSG00000198300|Q9GZU2-3|PEG3;chr19:56824514-56836018|39|11.51|0.17|6.04|-|ENST00000647621|ZIM2,ZIM2;chr19:56817579-56818600|38|19.68|0.62|5.0|-|ENST00000647621|PEG3,ZIM2;nc|ENSG00000198300|Q9GZU2-2|PEG3;nc|ENSG00000198300|Q9GZU2-4|PEG3;chr19:56836104-56837752|35|12.57|0.22|5.86|-|ENST00000649428|ZIM2,PEG3;chr19:56833763-56836018|38|26.37|0.74|5.16|-|ENST00000650632|PEG3,ZIM2;chr19:56833420-56836018|53|36.06|0.68|5.73|-|ENST00000649233|PEG3,ZIM2;chr19:56827246-56836018|17|10.18|0.0|19.96|-|ENST00000650102|PEG3,ZIM2;chr19:56826463-56833290|37|25.22|0.63|5.33|-|ENST00000649233|ZIM2,PEG3;chr19:56826463-56829783|33|12.79|0.36|5.15|-|ENST00000649876|ZIM2,PEG3;chr19:56826463-56827134|36|14.94|0.37|5.33|-|ENST00000650102|ZIM2,PEG3;chr19:56824514-56826388|41|23.68|0.7|5.09|-|ENST00000650102|ZIM2,ZIM2;chr19:56824427-56833290|51|35.98|0.96|5.23|-|ENST00000650632|ZIM2,PEG3;ENSG00000198300|ENST00000326441|PEG3;chr19:56824741-56836018|33|11.52|0.18|5.99|-|ENST00000599577|ZIM2,ZIM2	nc|ENSG00000198300|Q9GZU2-3|PEG3	nc|ENSG00000198300|Q9GZU2-3|PEG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.2528686523438	2	512.255651	1022.49675	-0.40094	-0.00020538	-3.2024	-0.0016405	-3.6034	-0.0018458	512.253883322564	54.419	1.295	54.474	54.011	55.305	0.055614					87	42	3	0	0	0	0.76764	1	4559	4559		34.173	5.023	1	718970			46405	295	31205	31218	52412	52412					-0.013599407484548465
QVGLILAR	8	Unmodified	_QVGLILAR_					0	0	0			REV__ENST00000493253.5_1_17:39778327-39780527:-|nuORF	REV__ENST00000493253.5_1_17:39778327-39780527:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3001403808594	2	435.281995	868.549437	-1.5713	-0.00068394	-1.5331	-0.00066735	-3.1044	-0.0013513	435.2814626527255	72.657	0.34472	72.789	72.618	72.963	0.13145					22	11	3	0	0	0	0.4196	1	6670	6670		6.7355	0	1	36785	+		46406	27690	31206	31219	52413	52413					0.10990385376669565
QVGLIVPS	8	Unmodified	_QVGLIVPS_					0	0	0			REV__ENSG00000136695|ENST00000393200|IL36RN	REV__ENSG00000136695|ENST00000393200|IL36RN	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2570495605469	2	406.747453	811.480354	-1.9774	-0.00080429	4.2784	0.0017402	2.301	0.00093592	406.7494790841525	33.446	0.18402	33.446	33.354	33.538	0					7	4	2	0	0	0	0.4196	1	1715	1715		29.15	3.6994	1	16244	+		46407	19326	31207	31220	52414	52414					0.06707301357096185
QVGLLRVK	8	Unmodified	_QVGLLRVK_					0	0	0		nc|ENSG00000065457|Q9BUB4-2|ADAT1;ENSG00000065457|ENST00000564657|ADAT1	nc|ENSG00000065457|Q9BUB4-2|ADAT1	nc|ENSG00000065457|Q9BUB4-2|ADAT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7920837402344	2	456.803094	911.591636	-0.13517	-6.1748E-05	-0.0064106	-2.9284E-06	-0.14159	-6.4677E-05	456.8028721986076	37.856	0.91056	38.378	38.21	39.121	0.52235					37	22	4	0	0	0	0.4196	1	3095	3095		21.96	3.6355	1	250830			46408	1128	31208	31221	52415	52415					0.1323036078504174
QVGLLVLP	8	Unmodified	_QVGLLVLP_					0	0	0			REV__ENST00000405995.5_1_9:134358773-134360079:+|nuORF	REV__ENST00000405995.5_1_9:134358773-134360079:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7747497558594	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.86288	1	2773	2773		26.796	2.5934	1	10440000	+		46409	26299	31209	31222	52416	52416					0.10712464770847419
QVGPELIL	8	Unmodified	_QVGPELIL_					0	0	0			REV__ENSG00000116819|ENST00000373235|TFAP2E	REV__ENSG00000116819|ENST00000373235|TFAP2E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7599792480469	2	434.760561	867.506569	0.15252	6.6311E-05	1.8637	0.00081025	2.0162	0.00087656	434.760660552279	87.036	1.2069	87.482	87.061	88.268	0.44628					53	28	4	0	0	0	0.80706	1	10256	10256		19.36	0	1	1015900	+		46410	18228	31210	31223	52417	52417					0.06751570528592765
QVGRPPLVF	9	Unmodified	_QVGRPPLVF_					0	0	0			REV__ENST00000460696.1_1_1:5923922-5924763:-|nuORF;REV__ENSG00000131697|ENST00000378156|NPHP4	REV__ENST00000460696.1_1_1:5923922-5924763:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8015441894531	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.78058	1	3334	3334		30.504	0	1	412810	+		46411	27014;18959	31211	31224	52418	52418					0.08122056922411502
QVGSIPLV	8	Unmodified	_QVGSIPLV_					0	0	0		ENSG00000133687|ENST00000539277|TMTC1;nc|ENSG00000133687|Q8IUR5-2|TMTC1;nc|ENSG00000133687|Q8IUR5-1|TMTC1;nc|ENSG00000133687|Q8IUR5-3|TMTC1;ENST00000553189.5_1_12:29689066-29935873:-|nuORF	ENSG00000133687|ENST00000539277|TMTC1;ENST00000553189.5_1_12:29689066-29935873:-|nuORF	ENSG00000133687|ENST00000539277|TMTC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7850341796875	2	406.747453	811.480354	1.5006	0.00061037	1.8266	0.00074295	3.3272	0.0013533	406.7482137474698	35.08	1.0671	35.086	34.727	35.794	0.0063934					31	25	2	0	0	0	0.4196	1	2270	2270		23.042	0	1	34248			46412	3888;13695	31212	31225	52419	52419					0.06707301357096185
QVGVPGVYTNL	11	Unmodified	_QVGVPGVYTNL_					0	0	0		ENST00000599865.5_1_19:51410192-51411818:-|nuORF;ENST00000602148.1_1_19:51410192-51412503:-|nuORF;nc|ENSG00000167749|Q9Y5K2|KLK4;ENSG00000167749|ENST00000324041|KLK4	ENST00000599865.5_1_19:51410192-51411818:-|nuORF	ENST00000599865.5_1_19:51410192-51411818:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.803955078125	2	573.811313	1145.60807	0.50161	0.00028783	-3.8876	-0.0022308	-3.386	-0.0019429	573.808958076325	51.177	0.45063	51.212	50.998	51.448	0.034588					20	11	2	0	0	0	0.72106	1	4071	4071		28.081	0.19925	1	141390			46413	6326	31213	31226	52420	52420					0.04109397160482331
QVGVPSKPT	9	Unmodified	_QVGVPSKPT_					0	0	0			REV__nc|ENSG00000257017|P00738-2|HP	REV__nc|ENSG00000257017|P00738-2|HP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7607727050781	2	456.761092	911.507631	-0.073363	-3.351E-05	0.091989	4.2017E-05	0.018626	8.5075E-06	456.76109623625416	34.547	0.64022	34.542	34.217	34.857	-0.0047417					30	15	3	0	0	0	0.6204	1	2089	2089		45.972	0.020292	1	111100	+		46414	23915	31214	31227	52421	52421					0.04833784897471105
QVHVTVIGGN	10	Unmodified	_QVHVTVIGGN_					0	0	0		ENSG00000083857|ENST00000441802|FAT1	ENSG00000083857|ENST00000441802|FAT1	ENSG00000083857|ENST00000441802|FAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2827758789062	2	512.282723	1022.55089	-0.3427	-0.00017556	-2.3981	-0.0012285	-2.7408	-0.0014041	512.2814243636773	86.125	3.8841	86.31	84.842	88.726	0.18523					170	91	2	0	0	0	0.8545	1	8479	8479		36.447	1.246	1	381930			46415	1509	31215	31228	52422	52422					0.04051974674769099
QVIDTKNILI	10	Unmodified	_QVIDTKNILI_					0	0	0		nc|ENSG00000091140|P09622-2|DLD;ENSG00000091140|ENST00000205402|DLD;ENST00000451081.5_1_7:107545401-107546727:+|nuORF;ENST00000478414.1_1_7:107543952-107546123:+|nuORF	nc|ENSG00000091140|P09622-2|DLD	nc|ENSG00000091140|P09622-2|DLD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.8484497070312	2	578.850438	1155.68632	-1.5045	-0.00087091	-0.36057	-0.00020871	-1.8651	-0.0010796	578.8503186649035	44.216	0.57048	44.667	44.362	44.932	0.45024					30	13	3	0	0	0	0.66675	1	4053	4053		46.457	2.806	1	1193400			46416	1671	31216	31229	52423	52423					0.11470829745712763
QVIIINRLAR	10	Unmodified	_QVIIINRLAR_					0	0	0			REV__ENSG00000136237|ENST00000665637|RAPGEF5	REV__ENSG00000136237|ENST00000665637|RAPGEF5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.2816162109375	2	598.385314	1194.75608	-2.2252	-0.0013315	-3.4846	-0.0020851	-5.7098	-0.0034166	598.38309778046	41.837	0.86842	41.84	41.587	42.455	0.0034142					35	20	2	0	0	0	0.37624	1	3147	3147		24.519	10.382	1	328290	+		46417	19296	31217	31230	52424	52424					0.16648753204981404
QVIKNIPEY	9	Unmodified	_QVIKNIPEY_					0	0	0		ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.306396484375	2	552.308406	1102.60226	0.26261	0.00014504	-3.8233	-0.0021116	-3.5607	-0.0019666	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.78536	1	9336	9336		29.15	0	1	1950800			46418	5338	31218	31231	52425	52425					0.05506298648788288
QVIKTNADVK	10	Unmodified	_QVIKTNADVK_					0	0	0		ENSG00000183960|ENST00000328405|KCNH8	ENSG00000183960|ENST00000328405|KCNH8	ENSG00000183960|ENST00000328405|KCNH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.32373046875	2	558.324588	1114.63462	0.94648	0.00052844	-0.50485	-0.00028187	0.44163	0.00024657	558.32418676663	50.8	0.45198	51.552	51.325	51.777	0.75174					18	10	2	0	0	0	0.21391	1	5043	5043		82.75	18.543	1	673730			46419	7576	31219	31232	52426	52426					0.08189086051788763
QVILVVGP	8	Unmodified	_QVILVVGP_					0	0	0			REV__nc|ENSG00000173193|Q460N5-3|PARP14	REV__nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76727294921875	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.89457	1	2701	2701		37.028	0	1	669780	+		46420	21898	31220	31233	52427	52427					0.0979217825380374
QVIMPGYCVQ	10	Unmodified	_QVIMPGYCVQ_					0	0	0		ENST00000478641.5_1_1:1248044-1248711:-|nuORF;ENST00000470030.6_1_1:1247241-1248711:-|nuORF	ENST00000478641.5_1_1:1248044-1248711:-|nuORF	ENST00000478641.5_1_1:1248044-1248711:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.2760009765625	2	569.275195	1136.53584	-1.0015	-0.00057015	0.34835	0.00019831	-0.65319	-0.00037184	569.2753008923387	58.655	0.52158	58.655	58.377	58.898	0					56	23	3	0	0	0	0.6116	1	5099	5099		49.442	7.0454	1	173440			46421	12213	31221	31234	52428	52428					-0.026969765091052977
QVIVQRLL	8	Unmodified	_QVIVQRLL_					0	0	0			REV__nc|ENSG00000172943|Q9UPP1-4|PHF8	REV__nc|ENSG00000172943|Q9UPP1-4|PHF8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.2873229980469	2	484.816202	967.617851	-2.1669	-0.0010506	2.1351	0.0010352	-0.031779	-1.5407E-05	484.8170959762748	67.631	0.6413	67.662	67.38	68.021	0.030563					46	24	3	0	0	0	0.4196	1	6461	6461		19.36	0	1	137680	+		46422	30033	31222	31235	52429	52429					0.13274629956515582
QVKAPTHIW	9	Unmodified	_QVKAPTHIW_					0	0	0			REV__nc|ENSG00000198589|P50851-2|LRBA;REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.30224609375	2	540.303458	1078.59236	0.044558	2.4075E-05	-1.1747	-0.00063468	-1.1301	-0.0006106	540.3021594373678	24.358	0.8342	23.976	23.407	24.241	-0.38178					27	18	2	0	0	0	0.7932	1	1177	1177		25.45	0	1	211490	+		46423	23342;21863	31223	31236	52430	52430					0.05621155434073444
QVKAPTWPTL	10	Unmodified	_QVKAPTWPTL_					0	0	0			REV__ENST00000468535.5_1_7:1586590-1589169:-|nuORF	REV__ENST00000468535.5_1_7:1586590-1589169:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.8255004882812	2	570.824224	1139.63389	0.28979	0.00016542	0.98882	0.00056444	1.2786	0.00072986	570.8247161195649	58.881	1.0315	59.435	59.047	60.079	0.55323					56	25	3	0	0	0	0.82886	1	6192	6192		37.812	1.3648	1	762650	+		46424	27185	31224	31237	52431	52431					0.06966291402750358
QVKAVLTS	8	Unmodified	_QVKAVLTS_					0	0	0			REV__ENSG00000164199|ENST00000405460|ADGRV1	REV__ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	423.2596435546875	2	423.258185	844.501818	-0.38901	-0.00016465	3.9873	0.0016877	3.5983	0.001523	423.25992388476186	21.708	1.0519	21.643	21.017	22.069	-0.064743					56	37	3	0	0	0	0.84341	1	651	651		24.203	0	1	71106	+		46425	21051	31225	31238	52432	52432					0.07334686385797795
QVKAVLTS	8	Unmodified	_QVKAVLTS_					0	0	0			REV__ENSG00000164199|ENST00000405460|ADGRV1	REV__ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	423.258185	844.501818	-0.38901	-0.00016465	3.9873	0.0016877	3.5983	0.001523	423.25992388476186	21.708	1.0519	21.643	21.017	22.069	-0.064743	0.10844	0.0012386	NaN	24.203	56	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71106	+		46426	21051	31225	31238							0.07334686385797795
QVKAVLTS	8	Unmodified	_QVKAVLTS_					0	0	0			REV__ENSG00000164199|ENST00000405460|ADGRV1	REV__ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	423.258185	844.501818	2.619	0.0011085	0.84184	0.00035632	3.4609	0.0014648	423.25857635303095	21.564	1.0346	21.502	21.086	22.121	-0.061295	-0.032723	-0.001424	NaN	24.203	60	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72757	+		46427	21051	31225	31238							0.07334686385797795
QVKFLSALLT	10	Unmodified	_QVKFLSALLT_					0	0	0			REV__nc|ENSG00000072756|Q96Q11-2|TRNT1	REV__nc|ENSG00000072756|Q96Q11-2|TRNT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3399658203125	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.86718	1	12299	12299		27.882	0	1	4071000	+		46428	16654	31226	31239	52433	52433					0.11535748579581195
QVKIRSRLIP	10	Unmodified	_QVKIRSRLIP_					0	0	0		ENSG00000182218|ENST00000330710|HHIPL1	ENSG00000182218|ENST00000330710|HHIPL1	ENSG00000182218|ENST00000330710|HHIPL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.26422119140625	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.91405	1	3649	3649		7.0187	0	1	2526100			46429	7434	31227	31240	52434	52434					0.1756903972204782
QVKIRSRLIP	10	Unmodified	_QVKIRSRLIP_					0	0	0		ENSG00000182218|ENST00000330710|HHIPL1	ENSG00000182218|ENST00000330710|HHIPL1	ENSG00000182218|ENST00000330710|HHIPL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9295654296875	3	403.931185	1208.77173	-1.8895	-0.00076324	-2.2243	-0.00089846	-4.1138	-0.0016617	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.8492	1	3512	3512		18.531	0	1	2300300			46430	7434	31227	31240	52435	52435					0.1756903972204782
QVKKKLYEEI	10	Unmodified	_QVKKKLYEEI_					0	0	0		ENSG00000148795|ENST00000369887|CYP17A1	ENSG00000148795|ENST00000369887|CYP17A1	ENSG00000148795|ENST00000369887|CYP17A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.58642578125	3	426.586972	1276.73909	0.43197	0.00018427	-3.1012	-0.0013229	-2.6692	-0.0011387	426.58581260955526	17.907	0.5297	17.285	17.101	17.631	-0.62141					18	12	2	0	0	0	0.86338	1	331	331		31.634	3.0575	1	292700			46431	4981	31228	31241	52436	52436					0.11178787808535162
QVKPSPLPVSV	11	Unmodified	_QVKPSPLPVSV_					0	0	0			REV__ENSG00000095203|ENST00000374566|EPB41L4B	REV__ENSG00000095203|ENST00000374566|EPB41L4B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8429565429688	2	575.845156	1149.67576	-0.46596	-0.00026832	-3.1419	-0.0018092	-3.6078	-0.0020776	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.70737	1	9266	9266		30.318	2.2362	1	3411000	+		46432	17054	31229	31242	52437	52437					0.10690847091268552
QVKRKWLWVFK	11	Unmodified	_QVKRKWLWVFK_					0	0	0		ENST00000446176.6_1_9:132650909-132651179:-|nuORF	ENST00000446176.6_1_9:132650909-132651179:-|nuORF	ENST00000446176.6_1_9:132650909-132651179:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.9742736816406	3	506.641634	1516.90307	2.9501	0.0014946	0.4301	0.00021791	3.3802	0.0017125	506.64173574763436	115.99	0.97626	115.96	115.81	116.79	-0.02433					40	29	2	0	0	0	0.18331	1	12838	12838		3.026	1.6072	1	91438			46433	11832	31230	31243	52438	52438					0.16529850089887077
QVKVKKSDN	9	Unmodified	_QVKVKKSDN_					0	0	0			REV__ENST00000420088.1_1_6:13618294-13618372:+|nuORF	REV__ENST00000420088.1_1_6:13618294-13618372:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3040161132812	2	523.303655	1044.59276	0.8255	0.00043199	-0.87613	-0.00045848	-0.050623	-2.6491E-05	523.3030798217648	101.17	1.685	101.32	100.51	102.19	0.14352					75	40	3	0	0	0	0.7932	1	10605	10605		23.523	0.48021	1	694620	+		46434	23741	31231	31244	52439	52439					0.07224530363282611
QVKVSLDVVF	10	Unmodified	_QVKVSLDVVF_					0	0	0			REV__ENST00000273038.7_1_3:11597946-11598108:-|nuORF	REV__ENST00000273038.7_1_3:11597946-11598108:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3301391601562	2	567.331882	1132.64921	0.48094	0.00027285	-3.8594	-0.0021896	-3.3785	-0.0019167	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.86763	1	9102	9102		26.693	2.1737	1	6590100	+		46435	24553	31232	31245	52440	52440					0.08819158199935373
QVLATRSR	8	Unmodified	_QVLATRSR_					0	0	0		ENSG00000165688|ENST00000371717|PMPCA;nc|ENSG00000165688|Q10713-2|PMPCA	ENSG00000165688|ENST00000371717|PMPCA	ENSG00000165688|ENST00000371717|PMPCA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2643737792969	2	465.777608	929.540663	0.1944	9.0548E-05	-0.40106	-0.00018681	-0.20666	-9.6258E-05	465.7764251663504	23.927	0.33661	23.545	23.327	23.663	-0.38178					10	7	2	0	0	0	0.4196	1	1109	1109		15.642	0	1	23169			46436	6112	31233	31246	52441	52441					0.07307411740168845
QVLCCRLSLQ	10	Unmodified	_QVLCCRLSLQ_					0	0	0		ENSG00000183840|ENST00000329321|GPR39	ENSG00000183840|ENST00000329321|GPR39	ENSG00000183840|ENST00000329321|GPR39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	581.80419921875	2	581.807193	1161.59983	-1.759	-0.0010234	-4.081	-0.0023744	-5.84	-0.0033977	581.8047058865073	62.986	1.4271	63.374	62.752	64.179	0.3878					94	32	4	0	0	0	0.19302	1	6764	6764		87.696	12.653	1	1535400			46437	7566	31234	31247	52442	52442					0.025498036478438735
QVLCKKNKF	9	Unmodified	_QVLCKKNKF_					0	0	0		ENST00000540341.1_1_12:8787977-8789216:+|nuORF;ENSG00000084754|ENST00000380649|HADHA	ENST00000540341.1_1_12:8787977-8789216:+|nuORF	ENST00000540341.1_1_12:8787977-8789216:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7904663085938	2	554.320794	1106.62703	0.33208	0.00018408	-3.0144	-0.0016709	-2.6823	-0.0014869	554.3189441968374	51.789	0.73528	52.456	52.105	52.84	0.66729					23	17	2	0	0	0	0.20789	1	5175	5175		29.15	1.2673	1	1139000			46438	13494	31235	31248	52443	52443					0.07798655250508091
QVLGCLVQPLA	11	Unmodified	_QVLGCLVQPLA_					0	0	0		nc|ENSG00000142197|Q9Y3R5-2|DOP1B;ENSG00000142197|ENST00000691173|DOP1B	nc|ENSG00000142197|Q9Y3R5-2|DOP1B	nc|ENSG00000142197|Q9Y3R5-2|DOP1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.7787475585938	2	570.825909	1139.63727	-0.82492	-0.00047088	-1.9833	-0.0011321	-2.8082	-0.001603	570.8245679441056	57.046	0.5397	57.442	57.16	57.699	0.39672					20	12	2	0	0	0	0.17478	1	5907	5907		25.574	0	1	241420			46439	4548	31236	31249	52444	52444					0.07303218185097649
QVLGKRESRGN	11	Unmodified	_QVLGKRESRGN_					0	0	0			REV__ENST00000355485.6_1_1:116238301-116238403:+|nuORF	REV__ENST00000355485.6_1_1:116238301-116238403:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	622.3470458984375	2	622.346917	1242.67928	1.3041	0.0008116	-0.61107	-0.0003803	0.69303	0.00043131	622.3465977924652	95.841	2.6338	96.072	95.148	97.782	0.23103					155	62	3	0	0	0	0.72106	1	9835	9835		28.081	0	1	379700	+		46440	25380	31237	31250	52445	52445					0.06764909917842488
QVLGPCPAV	9	Unmodified	_QVLGPCPAV_					0	0	0		ENST00000546953.1_1_6:170070523-170070838:-|nuORF	ENST00000546953.1_1_6:170070523-170070838:-|nuORF	ENST00000546953.1_1_6:170070523-170070838:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.24139404296875	2	442.238938	882.463324	1.1524	0.00050963	3.3739	0.0014921	4.5263	0.0020017	442.24031897086877	78.91	2.9149	78.962	77.3	80.215	0.051682					176	101	2	0	0	0	0.69914	1	7700	7700		40.573	1.7665	1	354610			46441	13596	31238	31251	52446	52446					0.01739057479630901
QVLIRETCT	9	Unmodified	_QVLIRETCT_					0	0	0		ENST00000593157.5_1_19:13216299-13227549:-|nuORF;ENST00000357720.8_1_19:13227157-13227549:-|nuORF;ENST00000590812.5_1_19:13226958-13227549:-|nuORF	ENST00000593157.5_1_19:13216299-13227549:-|nuORF	ENST00000593157.5_1_19:13216299-13227549:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7824096679688	2	531.784241	1061.55393	0.46378	0.00024663	-4.2133	-0.0022406	-3.7496	-0.001994	531.7820031077274	29.432	2.4582	29.343	28.288	30.746	-0.089544					170	57	5	0	0	0	0.15959	2	1831	1807;1831		82.241	6.6032	1	12586000			46442	14305	31239	31252	52447;52448	52448					0.025614817372343168
QVLKPGGSLF	10	Unmodified	_QVLKPGGSLF_					0	0	0		ENSG00000132423|ENST00000254759|COQ3	ENSG00000132423|ENST00000254759|COQ3	ENSG00000132423|ENST00000254759|COQ3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3043823242188	2	523.305667	1044.59678	-0.61952	-0.0003242	-3.0338	-0.0015876	-3.6533	-0.0019118	523.3039684590141	101.43	1.531	101.43	100.64	102.17	0					81	36	3	0	0	0	0.86272	1	10307	10307		24.519	0	1	761010			46443	3793	31240	31253	52449	52449					0.0762661985700106
QVLNSATI	8	Unmodified	_QVLNSATI_					0	0	0			REV__ENST00000567143.1_1_16:58438378-58438630:+|nuORF	REV__ENST00000567143.1_1_16:58438378-58438630:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.525146484375	2	423.239993	844.465432	1.5795	0.00066851	0.30937	0.00013094	1.8889	0.00079945	423.2399485591236	24.028	0.67776	23.514	23.112	23.79	-0.51365					20	15	2	0	0	0	0.4196	1	1166	1166		18.324	0	1	80557	+		46444	22489	31241	31254	52450	52450					0.03697809489096926
QVLQKQLDDAK	11	Unmodified	_QVLQKQLDDAK_					0	0	0		nc|ENSG00000111879|Q8NB25-4|FAM184A;nc|ENSG00000111879|Q8NB25-2|FAM184A;nc|ENSG00000111879|Q8NB25-3|FAM184A;ENSG00000111879|ENST00000338891|FAM184A	nc|ENSG00000111879|Q8NB25-4|FAM184A	nc|ENSG00000111879|Q8NB25-4|FAM184A	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3706665039062	2	643.359159	1284.70376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.46	1	115.43	114.93	115.93	-0.02433								0	0	0	0.56276	1	12785	12785		32.751	0	1				46445	2619	31242	31255	52451	52451					0.07280125280703942
QVLRGSAVL	9	Unmodified	_QVLRGSAVL_					0	0	0		ENSG00000113396|ENST00000262462|SLC27A6	ENSG00000113396|ENST00000262462|SLC27A6	ENSG00000113396|ENST00000262462|SLC27A6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.20367431640625	2	471.790184	941.565815	-0.68794	-0.00032456	0.97013	0.0004577	0.28219	0.00013314	471.7903830023144	28.365	0.69475	28.268	27.974	28.669	-0.096947					25	16	2	0	0	0	0.20789	1	1739	1739		27.882	0	1	139370			46446	2723	31243	31256	52452	52452					0.0926946654275298
QVLSPLLL	8	Unmodified	_QVLSPLLL_					0	0	0			REV__ENSG00000164142|ENST00000435205|FHIP1A	REV__ENSG00000164142|ENST00000435205|FHIP1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7887268066406	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.84341	1	3274	3274		24.203	0	1	448230	+		46447	21038	31244	31257	52453	52453					0.11308733942325944
QVLSSFSPFP	10	Unmodified	_QVLSSFSPFP_					0	0	0		ENST00000459775.5_1_2:85848673-85875928:+|nuORF	ENST00000459775.5_1_2:85848673-85875928:+|nuORF	ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7958984375	2	554.787307	1107.56006	0.66113	0.00036678	-0.90276	-0.00050084	-0.24164	-0.00013406	554.7867054478468	51.121	2.0515	51.873	51.202	53.253	0.75174					120	49	3	0	0	0	0.6116	1	5183	5183		49.442	1.7842	1	3213200			46448	11995	31245	31258	52454	52454					0.010583232404314913
QVLSTSIATLQ	11	Unmodified	_QVLSTSIATLQ_					0	0	0			REV__chr6:52269226-52271383|22|14.41|0.38|5.26|-|1|TE_info:AluSp,AluSp_dup17300,Alu,SINE,donor,+,52271383,52271674|MCM3,None|1	REV__chr6:52269226-52271383|22|14.41|0.38|5.26|-|1|TE_info:AluSp,AluSp_dup17300,Alu,SINE,donor,+,52271383,52271674|MCM3,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8325805664062	2	580.829703	1159.64485	-1.0916	-0.00063402	2.1904	0.0012723	1.0989	0.00063826	580.8307679449848	59.536	0.88874	60.089	59.574	60.463	0.55323					49	22	3	0	0	0	0.43522	1	6325	6325		56.632	1.9099	1	1358100	+		46449	15883	31246	31259	52455	52455					0.07141648986407745
QVLVTKSH	8	Unmodified	_QVLVTKSH_					0	0	0			REV__ENST00000409158.5_1_2:131904558-131904606:+|nuORF	REV__ENST00000409158.5_1_2:131904558-131904606:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.2696533203125	2	456.269084	910.523616	1.0852	0.00049514	-0.94589	-0.00043158	0.1393	6.3559E-05	456.26850794128734	27.802	1.27	27.547	27.196	28.466	-0.25465					68	30	3	0	0	0	0.83456	1	1639	1639		60.972	0	1	382970	+		46450	26335	31247	31260	52456	52456					0.06477491134364755
QVLWGRALLSY	11	Unmodified	_QVLWGRALLSY_					0	0	0		ENST00000452721.2_1_12:110815522-110815708:-|nuORF	ENST00000452721.2_1_12:110815522-110815708:-|nuORF	ENST00000452721.2_1_12:110815522-110815708:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.9134216308594	3	435.915312	1304.72411	-0.0086921	-3.789E-06	-2.9527	-0.0012871	-2.9614	-0.0012909	435.9139113667765	33.132	0.6597	33.135	32.85	33.509	0.0030785					34	14	3	0	0	0	0.75121	1	1897	1897		21.78	0.094677	1	120780			46451	11925	31248	31261	52457	52457					0.08393340731186072
QVNKLIYNI	9	Unmodified	_QVNKLIYNI_					0	0	0			REV__ENSG00000168143|ENST00000306858|FAM83B	REV__ENSG00000168143|ENST00000306858|FAM83B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.824462890625	2	552.824224	1103.63389	-1.0859	-0.00060033	1.3549	0.00074901	0.26894	0.00014868	552.8247634918083	77.88	0.86649	77.972	77.698	78.564	0.091438					80	32	4	0	0	0	0.22631	1	7292	7292		71.296	4.8664	1	542910	+		46452	21466	31249	31262	52458	52458					0.08622291402775772
QVPAKHKVGR	10	Unmodified	_QVPAKHKVGR_					0	0	0			REV__ENST00000479193.1_1_13:113534616-113534949:+|nuORF	REV__ENST00000479193.1_1_13:113534616-113534949:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3405151367188	2	560.340907	1118.66726	2.2618	0.0012674	-3.4816	-0.0019509	-1.2198	-0.00068351	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.8651	1	12379	12379		25.574	1.3713	1	14759000	+		46453	27397	31250	31263	52459	52459					0.11267337965318802
QVPAKLSH	8	Unmodified	_QVPAKLSH_					0	0	0			REV__nc|ENSG00000277399|Q6PRD1|GPR179	REV__nc|ENSG00000277399|Q6PRD1|GPR179	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.255615234375	2	440.255977	878.497401	0.10626	4.6782E-05	-1.6749	-0.0007374	-1.5687	-0.00069062	440.25513615369636	77.169	0.87977	77.738	77.379	78.259	0.56835					33	20	2	0	0	0	0.86677	1	8815	8815		27.882	2.4321	1	782430	+		46454	24024	31251	31264	52460	52460					0.05329221962904285
QVPALPLL	8	Unmodified	_QVPALPLL_					0	0	0		ENST00000584205.5_1_17:17891793-17931952:-|nuORF	ENST00000584205.5_1_17:17891793-17931952:-|nuORF	ENST00000584205.5_1_17:17891793-17931952:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	425.7748107910156	2	425.773471	849.53239	0.42545	0.00018115	3.0537	0.0013002	3.4791	0.0014813	425.7747050516017	38.994	1.8218	39.005	38.08	39.902	0.011173					147	42	5	0	0	0	0.81724	1	2688	2688		14.664	0	1	15234000			46455	14130	31252	31265	52461	52461					0.10160464770854105
QVPDVMAPQ	9	Unmodified	_QVPDVMAPQ_					0	0	0		ENST00000488498.2_1_1:156377632-156377902:-|nuORF;nc|ENSG00000125462|Q13536|MIR9-1HG	ENST00000488498.2_1_1:156377632-156377902:-|nuORF	ENST00000488498.2_1_1:156377632-156377902:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7938232421875	2	492.744585	983.474617	-1.8839	-0.00092828	-0.65051	-0.00032054	-2.5344	-0.0012488	492.74412384237826	43.406	0.75438	44.18	43.787	44.542	0.77379					27	18	2	0	0	0	0.20789	1	3891	3891		24.519	3.5723	1	337430			46456	12631	31253	31266	52462	52462					-0.01778165216887828
QVPGPPTGVHA	11	Unmodified	_QVPGPPTGVHA_					0	0	0		ENSG00000036448|ENST00000262113|MYOM2	ENSG00000036448|ENST00000262113|MYOM2	ENSG00000036448|ENST00000262113|MYOM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2813110351562	2	530.282723	1058.55089	0.39913	0.00021165	-1.7634	-0.00093511	-1.3643	-0.00072346	530.2817370348984	76.587	0.55269	76.538	76.177	76.73	-0.048264					32	18	2	0	0	0	0.62614	1	7586	7586		41.427	4.2675	1	143280			46457	902	31254	31267	52463	52463					0.023959746747550525
QVPHRARQQ	9	Unmodified	_QVPHRARQQ_					0	0	0			REV__chr16:2085026-2086193|16|10.94|0.65|4.07|+|2|TSC2,TSC2|2	REV__chr16:2085026-2086193|16|10.94|0.65|4.07|+|2|TSC2,TSC2|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3111572265625	2	560.310138	1118.60572	-1.0666	-0.00059765	3.7488	0.0021005	2.6821	0.0015028	560.3118570415677	38.395	0.68195	38.406	38.08	38.762	0.011173					33	15	3	0	0	0	0.76255	1	2607	2607		35.618	0.46626	1	212520	+		46458	15629	31255	31268	52464	52464					0.051164062660291165
QVPLKKILDAL	11	Unmodified	_QVPLKKILDAL_					0	0	0			REV__ENST00000582263.1_1_17:38092096-38095731:+|nuORF	REV__ENST00000582263.1_1_17:38092096-38095731:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.9325256347656	3	413.267463	1236.78056	-0.96374	-0.00039828	2.7379	0.0011315	1.7742	0.00073322	413.2683485818871	46.076	1.8536	46.047	44.579	46.432	-0.028782					58	42	2	0	0	0	0.17648	1	3593	3593		21.032	9.5776	1	340080	+		46459	29057	31256	31269	52465	52465					0.17163968567842858
QVPLPPNGQMP	11	Unmodified	_QVPLPPNGQMP_					0	0	0		ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4;ENSG00000156304|ENST00000286835|SCAF4	ENST00000467731.1_1_21:33057290-33073360:-|nuORF	ENST00000467731.1_1_21:33057290-33073360:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.2919311523438	2	589.305341	1176.59613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.69	1	64.814	64.314	65.314	0.12397								0	0	0	0.56276	1	5722	5722		30.318	2.4355	1				46460	5374	31257	31270	52466	52466					0.014894571456352423
QVPLTLELI	9	Unmodified	_QVPLTLELI_					0	0	0			REV__ENST00000426919.5_1_10:103345907-103347065:-|nuORF	REV__ENST00000426919.5_1_10:103345907-103347065:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3191528320312	2	513.3157	1024.61685	-0.40055	-0.00020561	2.1862	0.0011222	1.7857	0.00091662	513.3168893835641	46.422	0.89507	46.437	46.084	46.979	0.015514					35	24	2	0	0	0	0.7932	1	3387	3387		23.042	2.5607	1	150790	+		46461	26550	31258	31271	52467	52467					0.10552370796949617
QVPLVHHLTS	10	Unmodified	_QVPLVHHLTS_					0	0	0		ENST00000470832.1_1_X:70463642-70464308:-|nuORF	ENST00000470832.1_1_X:70463642-70464308:-|nuORF	ENST00000470832.1_1_X:70463642-70464308:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.7776489257812	2	565.819473	1129.62439	-0.67003	-0.00037912	-0.65842	-0.00037255	-1.3285	-0.00075166	565.8190055418892	48.325	0.32679	48.794	48.668	48.995	0.46941					12	7	2	0	0	0	0.37624	1	4634	4634		14.865	0	1	160070			46462	12227	31259	31272	52468	52468					0.06476523117225952
QVPNPAAAAI	10	Unmodified	_QVPNPAAAAI_					0	0	0		nc|ENSG00000100014|Q69YQ0-2|SPECC1L;ENSG00000100014|ENST00000314328|SPECC1L	nc|ENSG00000100014|Q69YQ0-2|SPECC1L	nc|ENSG00000100014|Q69YQ0-2|SPECC1L	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.2601623535156	2	476.266542	950.51853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.588	1	76.153	75.653	76.653	0.56458								0	0	0	0.45132	1	8586	8586		49.442	10.635	1				46463	1784	31260	31273	52469	52469					0.04129187271735191
QVPTHFVN	8	Unmodified	_QVPTHFVN_					0	0	0		ENST00000588701.1_1_17:75370096-75370759:-|nuORF	ENST00000588701.1_1_17:75370096-75370759:-|nuORF	ENST00000588701.1_1_17:75370096-75370759:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	471.2417907714844	2	471.245609	940.476666	-1.6339	-0.00076995	-2.1185	-0.00099833	-3.7523	-0.0017683	471.24439943443156	85.663	2.966	85.821	84.632	87.598	0.15851					150	68	3	0	0	0	0.90983	1	8275	8275		42.396	9.5837	1	239090			46464	14217	31261	31274	52470	52470					0.0040463158322836534
QVPTLHGVPHH	11	Unmodified	_QVPTLHGVPHH_					0	0	0		ENST00000251507.8_1_1:174671318-174671375:+|nuORF	ENST00000251507.8_1_1:174671318-174671375:+|nuORF	ENST00000251507.8_1_1:174671318-174671375:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3363647460938	2	611.327996	1220.64144	1.1116	0.00067957	0.91857	0.00056155	2.0302	0.0012411	611.3286276945797	78.517	1.0448	78.644	78.256	79.301	0.12695					71	31	4	0	0	0	0.67778	1	7382	7382		35.152	2.3396	1	448710			46465	9301	31262	31275	52471	52471					0.03994443723036056
QVPVILTSQ	9	Unmodified	_QVPVILTSQ_					0	0	0		nc|ENSG00000119977|Q6NUS6-2|TCTN3;ENSG00000119977|ENST00000371217|TCTN3	nc|ENSG00000119977|Q6NUS6-2|TCTN3	nc|ENSG00000119977|Q6NUS6-2|TCTN3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.6968688964844	2	492.78985	983.565146	0.32328	0.00015931	-1.0263	-0.00050573	-0.70298	-0.00034642	492.7890910007839	31.844	0.8975	31.951	31.377	32.274	0.10707					35	20	2	0	0	0	0.20789	1	2188	2188		31.53	0	1	214070			46466	3107	31263	31276	52472	52472					0.07270627103048355
QVQAAYICVS	10	Unmodified	_QVQAAYICVS_					0	0	0			REV__nc|ENSG00000184313|Q68CQ1-9|MROH7	REV__nc|ENSG00000184313|Q68CQ1-9|MROH7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.2693481445312	2	541.270967	1080.52738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.654	1	16.043	15.543	16.543	-0.6107								0	0	0	0.45132	1	160	160		32.812	2.3088	1		+		46467	22663	31264	31277	52473	52473					-0.00966207154078802
QVQAKVVLGP	10	Unmodified	_QVQAKVVLGP_					0	0	0			REV__ENSG00000148843|ENST00000369797|PDCD11	REV__ENSG00000148843|ENST00000369797|PDCD11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8184814453125	2	519.818941	1037.62333	0.53043	0.00027573	-2.0205	-0.0010503	-1.49	-0.00077455	519.8177780302549	86.129	1.5218	86.573	86.074	87.596	0.44331					94	36	4	0	0	0	0.85934	1	10115	10115		35.618	1.4457	1	1531200	+		46468	20142	31265	31278	52474	52474					0.10602308748320866
QVQAQKVP	8	Unmodified	_QVQAQKVP_					0	0	0			REV__ENSG00000046604|ENST00000261590|DSG2	REV__ENSG00000046604|ENST00000261590|DSG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2599182128906	2	449.261259	896.507966	0.47902	0.00021521	-2.0825	-0.00093559	-1.6035	-0.00072038	449.2601268412696	70.509	0.67209	70.638	70.305	70.977	0.12965					54	34	2	0	0	0	0.86288	1	6419	6419		26.796	0.10319	1	260720	+		46469	16344	31266	31279	52475	52475					0.05557204617332445
QVQCIKEW	8	Unmodified	_QVQCIKEW_					0	0	0			REV__nc|ENSG00000100796|Q6IN85-2|PPP4R3A	REV__nc|ENSG00000100796|Q6IN85-2|PPP4R3A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.314208984375	2	517.260402	1032.50625	0.68942	0.00035661	1.8265	0.00094477	2.5159	0.0013014	517.764168303714	32.388	0.17263	32.495	32.403	32.575	0.10707					5	3	2	0	0	0	0.4196	1	2278	2278		35.201	21.064	1	28746	+		46470	17220	31267	31280	52476	52476					-0.008701724629418095
QVQEIVKRRL	10	Unmodified	_QVQEIVKRRL_					0	0	0			REV__CON__P02672	REV__CON__P02672	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8929443359375	2	634.893503	1267.77245	1.4999	0.00095225	-3.3387	-0.0021197	-1.8389	-0.0011675	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.77314	1	11371	11371		40.778	1.5253	1	68597000	+	+	46471	15976	31268	31281	52477	52477					0.14927834371087556
QVQEIVKRRL	10	Unmodified	_QVQEIVKRRL_					0	0	0			REV__CON__P02672	REV__CON__P02672	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8927001953125	2	634.893503	1267.77245	1.9684	0.0012497	-3.4658	-0.0022004	-1.4974	-0.00095071	634.8913842364989	105.48	2.7267	105.63	104.93	107.65	0.15583					244	94	5	0	0	0	0.64457	1	12854	12854		47.657	3.2801	1	2461800	+	+	46472	15976	31268	31281	52478	52478					0.14927834371087556
QVQGQKPFL	9	Unmodified	_QVQGQKPFL_					0	0	0			REV__ENST00000461375.1_1_1:44280573-44366462:+|nuORF	REV__ENST00000461375.1_1_1:44280573-44366462:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.796142578125	2	522.795466	1043.57638	0.60427	0.00031591	-0.4962	-0.00025941	0.10807	5.6498E-05	522.7953135933902	57.532	0.87128	58.087	57.601	58.472	0.55513					50	21	3	0	0	0	0.62081	1	6021	6021		45.952	1.8352	1	1292800	+		46473	27026	31269	31282	52479	52479					0.056334491971938405
QVQKYKQV	8	Unmodified	_QVQKYKQV_					0	0	0		nc|ENSG00000177302|Q13472-3|TOP3A;nc|ENSG00000177302|Q13472-2|TOP3A;ENSG00000177302|ENST00000321105|TOP3A	nc|ENSG00000177302|Q13472-3|TOP3A	nc|ENSG00000177302|Q13472-3|TOP3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.79461669921875	2	510.795466	1019.57638	2.77	0.0014149	-1.8443	-0.00094206	0.92571	0.00047285	510.7937006198357	26.335	0.57825	25.995	25.745	26.323	-0.34035					28	12	4	0	0	0	0.89962	1	1462	1462		38.806	4.6336	1	160580			46474	7132	31270	31283	52480	52480					0.06737449197180467
QVQLVKKST	9	Unmodified	_QVQLVKKST_					0	0	0			REV__ENST00000468969.6_1_9:130536664-130540951:-|nuORF	REV__ENST00000468969.6_1_9:130536664-130540951:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8141479492188	2	515.816399	1029.61824	2.5821	0.0013319	-2.2901	-0.0011813	0.29199	0.00015061	515.8149408689814	25.348	0.52347	24.917	24.627	25.15	-0.4311					25	11	3	0	0	0	0.76764	1	1312	1312		34.173	0.65696	1	172540	+		46475	27191	31271	31284	52481	52481					0.10462004885698661
QVQLVKKST	9	Unmodified	_QVQLVKKST_					0	0	0			REV__ENST00000468969.6_1_9:130536664-130540951:-|nuORF	REV__ENST00000468969.6_1_9:130536664-130540951:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	515.816399	1029.61824	0.72115	0.00037198	-0.375	-0.00019343	0.34615	0.00017855	515.8159651911996	25.342	0.55952	25.014	24.793	25.353	-0.32825	0.048345	0.0011613	NaN	34.173	23	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	148800	+		46476	27191	31271	31284							0.10462004885698661
QVQLVKKST	9	Unmodified	_QVQLVKKST_					0	0	0			REV__ENST00000468969.6_1_9:130536664-130540951:-|nuORF	REV__ENST00000468969.6_1_9:130536664-130540951:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	515.816399	1029.61824	2.5821	0.0013319	-2.2901	-0.0011813	0.29199	0.00015061	515.8149408689814	25.348	0.52347	24.917	24.627	25.15	-0.4311	-0.048345	-0.0008144	NaN	34.173	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172540	+		46477	27191	31271	31284							0.10462004885698661
QVQMVAIQ	8	Unmodified	_QVQMVAIQ_					0	0	0		ENST00000399586.2_1_X:74960734-74966719:-|nuORF	ENST00000399586.2_1_X:74960734-74966719:-|nuORF	ENST00000399586.2_1_X:74960734-74966719:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7516174316406	2	458.74967	915.484787	1.1793	0.00054099	4.3946	0.002016	5.5738	0.002557	458.75130962594056	23.717	1.8273	23.143	22.747	24.574	-0.57415					83	41	4	0	0	0	0.91005	1	1119	1119		42.474	3.6683	1	885740			46478	11209	31272	31285	52482	52482					0.023664425083552487
QVQQLKDQVLS	11	Unmodified	_QVQQLKDQVLS_					0	0	0		nc|ENSG00000160299|O95613-2|PCNT;ENSG00000160299|ENST00000359568|PCNT	nc|ENSG00000160299|O95613-2|PCNT	nc|ENSG00000160299|O95613-2|PCNT	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.3687744140625	2	643.359159	1284.70376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.42	1	115.39	114.89	115.89	-0.02433								0	0	0	0.56276	1	12782	12782		28.081	1.0342	1				46479	5577	31273	31286	52483	52483					0.07280125280703942
QVQQPPPPPAA	11	Unmodified	_QVQQPPPPPAA_					0	0	0		ENSG00000140836|ENST00000268489|ZFHX3;chr16:73456258-73680180|53|17.49|0.14|6.93|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73318336-73456003|47|12.38|0.07|7.55|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73257136-73318240|51|12.71|0.0|20.28|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73143831-73257047|49|21.06|0.1|7.71|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73131094-73143752|54|16.8|0.2|6.36|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73093598-73130968|46|12.0|0.08|7.25|-|ENST00000641206|ZFHX3,ZFHX3;nc|ENSG00000140836|Q15911-2|ZFHX3;chr16:72950965-73058530|60|21.05|0.31|6.07|-|ENST00000397992|ZFHX3,ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	565.305419921875	2	565.303655	1128.59276	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.058	1	22	21.5	22.5	-0.05867								0	0	0	0.56276	1	688	688		26.693	1.1189	1				46480	208	31274	31287	52484	52484					0.03360530363283942
QVQVMKLAR	9	Unmodified	_QVQVMKLAR_					0	0	0			REV__nc|ENSG00000125675|P42263|GRIA3	REV__nc|ENSG00000125675|P42263|GRIA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.8191528320312	2	536.818418	1071.62228	-0.21311	-0.0001144	-0.019903	-1.0684E-05	-0.23301	-0.00012509	536.8182852906143	18.614	0.47422	17.992	17.767	18.241	-0.62141					18	10	3	0	0	0	0.43338	1	417	417		55.504	7.5886	1	173000	+		46481	29824	31275	31288	52485	52485					0.08933771107763278
QVQVMKLAR	9	Unmodified	_QVQVMKLAR_					0	0	0			REV__nc|ENSG00000125675|P42263|GRIA3	REV__nc|ENSG00000125675|P42263|GRIA3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	536.818418	1071.62228	0.98518	0.00052886	-0.04162	-2.2342E-05	0.94356	0.00050652	536.8183934948811	18.013	0.18872	18.088	18.003	18.192	0.075443	0.04361	0.00020977	NaN	55.504	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28459	+		46482	29824	31275	31288							0.08933771107763278
QVQVMKLAR	9	Unmodified	_QVQVMKLAR_					0	0	0			REV__nc|ENSG00000125675|P42263|GRIA3	REV__nc|ENSG00000125675|P42263|GRIA3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	536.818418	1071.62228	0.39565	0.00021239	-0.84389	-0.00045302	-0.44824	-0.00024062	536.8179366312809	18.279	0.20787	18.203	18.121	18.329	-0.07671	0.1577	-0.00065158	NaN	55.504	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29352	+		46483	29824	31275	31288							0.08933771107763278
QVQVMKLAR	9	Unmodified	_QVQVMKLAR_					0	0	0			REV__nc|ENSG00000125675|P42263|GRIA3	REV__nc|ENSG00000125675|P42263|GRIA3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	536.818418	1071.62228	0.99044	0.00053169	-1.0638	-0.00057106	-0.073344	-3.9372E-05	536.8176868311722	18.3	0.19659	18.221	18.095	18.292	-0.078941	0.17646	-0.00088767	NaN	55.504	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38470	+		46484	29824	31275	31288							0.08933771107763278
QVQVMKLAR	9	Unmodified	_QVQVMKLAR_					0	0	0			REV__nc|ENSG00000125675|P42263|GRIA3	REV__nc|ENSG00000125675|P42263|GRIA3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	536.818418	1071.62228	0.89084	0.00047822	5.6291	0.0030218	6.5199	0.0035	537.3236727286871	17.829	0.054197	17.805	17.76	17.814	-0.024035	-0.24037	0.006298	NaN	55.504	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41331	+		46485	29824	31275	31288							0.08933771107763278
QVQVMKLAR	9	Unmodified	_QVQVMKLAR_					0	0	0			REV__nc|ENSG00000125675|P42263|GRIA3	REV__nc|ENSG00000125675|P42263|GRIA3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	536.818418	1071.62228	-0.21311	-0.0001144	-0.019903	-1.0684E-05	-0.23301	-0.00012509	536.8182852906143	18.614	0.47422	17.992	17.767	18.241	-0.62141	-0.052425	0.00023308	NaN	55.504	18	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173000	+		46486	29824	31275	31288							0.08933771107763278
QVREISFTV	9	Unmodified	_QVREISFTV_					0	0	0			REV__ENST00000457976.1_1_9:93881489-93881789:-|nuORF	REV__ENST00000457976.1_1_9:93881489-93881789:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.7985229492188	2	539.798206	1077.58186	1.5892	0.00085785	1.4363	0.00077529	3.0255	0.0016331	539.7987299992417	26.686	0.63107	26.345	26.006	26.637	-0.34035					24	13	3	0	0	0	0.48102	1	1501	1501		52.937	1.6012	1	201220	+		46487	26977	31276	31289	52486	52486					0.0461712798901317
QVRGDKLHILS	11	Unmodified	_QVRGDKLHILS_					0	0	0			REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3	REV__nc|ENSG00000116406|Q9BZQ6-2|EDEM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5805358886719	3	422.582333	1264.72517	-1.8745	-0.00079214	1.022	0.00043188	-0.85252	-0.00036026	422.58264285495795	97.6	3.2584	97.802	96.488	99.746	0.20206					167	75	4	0	0	0	0.73893	1	10032	10032		16.53	0	1	303430	+		46488	18198	31277	31290	52487	52487					0.10339555100085818
QVRGGPGTK	9	Unmodified	_QVRGGPGTK_					0	0	0		ENST00000591750.1_1_19:11347408-11347555:-|nuORF	ENST00000591750.1_1_19:11347408-11347555:-|nuORF	ENST00000591750.1_1_19:11347408-11347555:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.797119140625	2	450.256508	898.498464	2.5113	0.0011307	1.4582	0.00065657	3.9695	0.0017873	450.25712397191535	26.02	1.659	25.589	25.109	26.768	-0.4311					129	37	5	0	0	0	0.20789	1	1492	1492		25.574	1.3713	1	8434200			46489	14279	31278	31291	52488	52488					0.04515436331814726
QVRGLPTQ	8	Unmodified	_QVRGLPTQ_					0	0	0			REV__ENST00000595125.5_1_19:50436342-50436534:+|nuORF	REV__ENST00000595125.5_1_19:50436342-50436534:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.75439453125	2	449.758884	897.503215	-1.2827	-0.0005769	-2.2293	-0.0010026	-3.512	-0.0015795	449.7594110416722	81.093	0.21761	81.238	81.144	81.362	0.14512					6	4	2	0	0	0	0.4196	1	7759	7759		34.173	0	1	16365	+		46490	29243	31279	31292	52489	52489					0.05036320474550848
QVRGLPTQ	8	Unmodified	_QVRGLPTQ_					0	0	0			REV__ENST00000595125.5_1_19:50436342-50436534:+|nuORF	REV__ENST00000595125.5_1_19:50436342-50436534:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	449.758884	897.503215	-0.96809	-0.00043541	2.196	0.00098768	1.2279	0.00055227	449.75894289350884	80.877	0.81453	81.299	80.976	81.79	0.4215	0.037007	0.0034394	NaN	40.778	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116580	+		46491	29243	31279	31292							0.05036320474550848
QVRGLPTQ	8	Unmodified	_QVRGLPTQ_					0	0	0			REV__ENST00000595125.5_1_19:50436342-50436534:+|nuORF	REV__ENST00000595125.5_1_19:50436342-50436534:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	449.758884	897.503215	0.063605	2.8607E-05	0.065053	2.9258E-05	0.12866	5.7865E-05	449.75859140863673	80.721	0.6978	81.248	80.949	81.647	0.52676	-0.013424	0.0015226	NaN	40.778	20	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86571	+		46492	29243	31279	31292							0.05036320474550848
QVRIAGQILVV	11	Unmodified	_QVRIAGQILVV_					0	0	0			REV__nc|ENSG00000213676|Q99941-2|ATF6B	REV__nc|ENSG00000213676|Q99941-2|ATF6B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.8829956054688	2	598.379697	1194.74484	-0.19423	-0.00011622	3.3027	0.0019763	3.1085	0.00186	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.73893	1	2964	2964		24.519	1.4767	1	825320	+		46493	23629	31280	31293	52490	52490					0.15525931110823876
QVRLETIKDR	10	Unmodified	_QVRLETIKDR_					0	0	0			REV__ENSG00000155659|ENST00000374737|VSIG4	REV__ENSG00000155659|ENST00000374737|VSIG4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.75543212890625	3	419.913971	1256.72008	0.052109	2.1881E-05	0.19145	8.0391E-05	0.24356	0.00010227	419.91394043831446	21.705	0.47357	21.077	20.804	21.277	-0.62835					17	11	2	0	0	0	0.37624	1	813	813		18.531	5.5736	1	65979	+		46494	20438	31281	31294	52491	52491					0.10199251237463614
QVRPIVGPF	9	Unmodified	_QVRPIVGPF_					0	0	0		CON__ENSEMBL:ENSBTAP00000016046	CON__ENSEMBL:ENSBTAP00000016046	CON__ENSEMBL:ENSBTAP00000016046	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8022766113281	2	506.800552	1011.58655	-0.4843	-0.00024544	2.1408	0.001085	1.6565	0.00083952	506.8016364988691	53.923	1.2683	53.971	53.181	54.449	0.047802					71	44	2	0	0	0	0.7932	1	4416	4416		26.796	2.5934	1	157540		+	46495	564	31282	31295	52492	52492					0.08122056922422871
QVRRVPGG	8	Unmodified	_QVRRVPGG_					0	0	0		ENST00000467201.5_1_7:100176230-100176407:-|nuORF	ENST00000467201.5_1_7:100176230-100176407:-|nuORF	ENST00000467201.5_1_7:100176230-100176407:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7598571777344	2	434.759218	867.503883	2.1234	0.00092316	-2.3923	-0.0010401	-0.26887	-0.00011689	434.758413846185	87.485	3.2565	87.538	86.101	89.357	0.053024					140	76	4	0	0	0	0.86791	1	8964	8964		28.254	2.8041	1	1543500			46496	12152	31283	31296	52493	52493					0.06483159914284897
QVRRVPGG	8	Unmodified	_QVRRVPGG_					0	0	0		ENST00000467201.5_1_7:100176230-100176407:-|nuORF	ENST00000467201.5_1_7:100176230-100176407:-|nuORF	ENST00000467201.5_1_7:100176230-100176407:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7596740722656	2	434.759218	867.503883	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.349	1	87.55	87.05	88.05	0.20114								0	0	0	0.29353	1	8623	8623		28.254	1.4582	1				46497	12152	31283	31296	52494	52494					0.06483159914284897
QVRRVPGG	8	Unmodified	_QVRRVPGG_					0	0	0		ENST00000467201.5_1_7:100176230-100176407:-|nuORF	ENST00000467201.5_1_7:100176230-100176407:-|nuORF	ENST00000467201.5_1_7:100176230-100176407:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7597961425781	2	434.759218	867.503883	0.61638	0.00026798	-1.2568	-0.00054642	-0.64046	-0.00027845	434.7589702890546	87.554	3.2021	87.703	86.279	89.481	0.14956					123	75	2	0	0	0	0.86791	1	8699	8699		28.254	1.4582	1	1373100			46498	12152	31283	31296	52495	52495					0.06483159914284897
QVRRVPGG	8	Unmodified	_QVRRVPGG_					0	0	0		ENST00000467201.5_1_7:100176230-100176407:-|nuORF	ENST00000467201.5_1_7:100176230-100176407:-|nuORF	ENST00000467201.5_1_7:100176230-100176407:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7600402832031	2	434.759218	867.503883	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.441	1	87.61	87.11	88.11	0.16923								0	0	0	0.29694	1	8591	8591		37.028	3.5129	1				46499	12152	31283	31296	52496	52496					0.06483159914284897
QVRRVPGG	8	Unmodified	_QVRRVPGG_					0	0	0		ENST00000467201.5_1_7:100176230-100176407:-|nuORF	ENST00000467201.5_1_7:100176230-100176407:-|nuORF	ENST00000467201.5_1_7:100176230-100176407:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7594909667969	2	434.759218	867.503883	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.613	1	87.782	87.282	88.282	0.16923								0	0	0	0.29568	1	8615	8615		35.201	3.2459	1				46500	12152	31283	31296	52497	52497					0.06483159914284897
QVRTIVIQKE	10	Unmodified	_QVRTIVIQKE_					0	0	0		ENST00000485274.1_1_1:217671646-217783710:-|nuORF	ENST00000485274.1_1_1:217671646-217783710:-|nuORF	ENST00000485274.1_1_1:217671646-217783710:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.2466125488281	3	405.24695	1212.71902	1.65	0.00066868	-1.1207	-0.00045416	0.52934	0.00021451	405.24639893952656	23.489	3.066	23.108	22.404	25.47	-0.38178					149	70	4	0	0	0	0.79014	1	1005	1005		39.873	8.2389	1	247320			46501	12552	31284	31297	52498	52498					0.12117036868517062
QVRTMIIRGEP	11	Unmodified	_QVRTMIIRGEP_					0	0	0			REV__ENSG00000120458|ENST00000374979|MSANTD2	REV__ENSG00000120458|ENST00000374979|MSANTD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801818847656	3	433.911573	1298.71289	0.14124	6.1285E-05	-2.911	-0.0012631	-2.7698	-0.0012018	434.2436379597694	34.898	0.072571	35.004	34.942	35.014	0.10603					4	2	2	0	0	0	0.17432	1	1795	1795		33.039	13.777	1	23010	+		46502	18413	31285	31298	52499	52499					0.07548195365416177
QVSCPSAHEC	10	Carbamidomethyl (C)	_QVSCPSAHEC(Carbamidomethyl (C))_	QVSC(0.026)PSAHEC(0.974)		QVSC(-16)PSAHEC(16)		0	1	0		ENST00000261965.7_1_13:113140005-113140284:-|nuORF;ENST00000440735.2_2_13:111642507-111642792:+|nuORF	ENST00000261965.7_1_13:113140005-113140284:-|nuORF	ENST00000261965.7_1_13:113140005-113140284:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	559.3350830078125	2	559.223691	1116.43283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.042	1	27.07	26.57	27.57	0.02817								0	0	0	0.45132	1	1062	1062		42.396	10.866	2				46503	9425	31286	31299	52500	52500	122				-0.12073088967736112
QVSFPTLSSH	10	Unmodified	_QVSFPTLSSH_					0	0	0			REV__ENSG00000165030|ENST00000297689|NFIL3	REV__ENSG00000165030|ENST00000297689|NFIL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	551.776123046875	2	551.780013	1101.54547	-1.5043	-0.00083005	-2.0662	-0.0011401	-3.5705	-0.0019701	551.77864396301	30.515	0.43739	30.515	30.237	30.674	0					28	17	2	0	0	0	0.80179	1	1395	1395		39.253	3.6345	1	67618	+		46504	21141	31287	31300	52501	52501					-0.0012374890770843194
QVSHIYAH	8	Unmodified	_QVSHIYAH_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7447204589844	2	477.743234	953.471915	-0.071145	-3.3989E-05	0.58183	0.00027797	0.51069	0.00024398	477.7428261454946	28.568	0.47159	28.395	28.16	28.631	-0.17336					16	11	2	0	0	0	0.88944	1	1750	1750		57.811	5.5121	1	77646	+		46505	21530	31288	31301	52502	52502					-0.006682525595351763
QVSIIISAR	9	Unmodified	_QVSIIISAR_					0	0	0		nc|ENSG00000133067|Q9HBX8-2|LGR6	nc|ENSG00000133067|Q9HBX8-2|LGR6	nc|ENSG00000133067|Q9HBX8-2|LGR6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7401123046875	2	493.803291	985.59203	0.19773	9.7642E-05	2.3072	0.0011393	2.5049	0.0012369	493.8027769669147	33.944	0.25055	34.154	33.983	34.234	0.21002					6	5	2	0	0	0	0.20789	1	2465	2465		32.812	0	1	25586			46506	14925	31289	31302	52503	52503					0.09865735714231505
QVSKTSSVL	9	Unmodified	_QVSKTSSVL_					0	0	0		nc|ENSG00000178177|Q8N3X6-2|LCORL;nc|ENSG00000178177|Q8N3X6|LCORL	nc|ENSG00000178177|Q8N3X6-2|LCORL	nc|ENSG00000178177|Q8N3X6-2|LCORL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.77392578125	2	474.771657	947.528761	1.6045	0.00076178	2.8508	0.0013535	4.4553	0.0021153	474.7729143386918	94.736	1.0324	95.168	94.846	95.878	0.4324					45	24	3	0	0	0	0.21969	1	11306	11306		71.877	3.0906	1	608530			46507	15121	31290	31303	52504	52504					0.05289750206316057
QVSKTSSVL	9	Unmodified	_QVSKTSSVL_					0	0	0		nc|ENSG00000178177|Q8N3X6-2|LCORL;nc|ENSG00000178177|Q8N3X6|LCORL	nc|ENSG00000178177|Q8N3X6-2|LCORL	nc|ENSG00000178177|Q8N3X6-2|LCORL	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	474.771657	947.528761	-0.68646	-0.00032591	5.1775	0.0024581	4.4911	0.0021322	474.7739625373348	94.858	1.1753	95.278	94.933	96.109	0.41963	0.054541	0.0013366	NaN	71.877	51	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	642350			46508	15121	31290	31303							0.05289750206316057
QVSPFKLI	8	Unmodified	_QVSPFKLI_					0	0	0			REV__ENSG00000205327|ENST00000548615|OR6C68;REV__ENSG00000179695|ENST00000641202|OR6C2	REV__ENSG00000179695|ENST00000641202|OR6C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.2818298339844	2	466.284203	930.553853	0.04489	2.0932E-05	-4.1114	-0.0019171	-4.0665	-0.0018961	466.28216714928925	16.361	0.36927	15.763	15.555	15.924	-0.59873					12	7	3	0	0	0	0.89494	1	132	132		37.159	0	1	217770	+		46509	23550;22349	31291	31304	52505	52505					0.08579849799559724
QVSQWIVP	8	Unmodified	_QVSQWIVP_					0	0	0			REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|0|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|14	REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|0|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.6640930175781	2	478.763635	955.512717	-0.00055227	-2.6441E-07	0.089659	4.2926E-05	0.089107	4.2661E-05	478.76358066930874	71.306	0.62202	71.69	71.294	71.916	0.38449					23	14	2	0	0	0	0.4196	1	7904	7904		42.474	10.52	1	116710	+		46510	15522	31292	31305	52506	52506					0.03318088760079263
QVSREPRLRL	10	Unmodified	_QVSREPRLRL_					0	0	0		nc|ENSG00000120896|O60504-2|SORBS3;ENSG00000120896|ENST00000240123|SORBS3	nc|ENSG00000120896|O60504-2|SORBS3	nc|ENSG00000120896|O60504-2|SORBS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.383544921875	2	627.375478	1252.7364	6.5825	0.0041297	4.0117	0.0025168	10.594	0.0066465	627.3778931643454	110.88	0.7373	110.93	110.56	111.3	0.049095					56	30	2	0	0	0	0.86763	1	13481	13481		26.693	0	1	362180			46511	3156	31293	31306	52507	52507					0.12014377194213921
QVSTATLKL	9	Unmodified	_QVSTATLKL_					0	0	0			REV__ENST00000559920.5_1_15:57182237-57209815:-|nuORF	REV__ENST00000559920.5_1_15:57182237-57209815:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.7903747558594	2	480.78985	959.565146	1.0926	0.00052533	-1.3209	-0.00063506	-0.22823	-0.00010973	480.7890454445309	23.31	0.54122	22.909	22.593	23.135	-0.40058					27	12	3	0	0	0	0.54908	1	1016	1016		49.536	5.1589	1	89531	+		46512	28750	31294	31307	52508	52508					0.0837462710304635
QVSTATLKL	9	Unmodified	_QVSTATLKL_					0	0	0			REV__ENST00000559920.5_1_15:57182237-57209815:-|nuORF	REV__ENST00000559920.5_1_15:57182237-57209815:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	480.78985	959.565146	0.21791	0.00010477	-0.052983	-2.5474E-05	0.16493	7.9295E-05	480.7896908578666	23.28	0.49775	22.705	22.467	22.965	-0.57415	-0.10175	0.00040903	NaN	49.536	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135240	+		46513	28750	31294	31307							0.0837462710304635
QVSTNLLDFE	10	Unmodified	_QVSTNLLDFE_					0	0	0		nc|ENSG00000160282|O95954-3|FTCD;ENSG00000160282|ENST00000397746|FTCD;nc|ENSG00000160282|O95954-2|FTCD	nc|ENSG00000160282|O95954-3|FTCD	nc|ENSG00000160282|O95954-3|FTCD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.2918090820312	2	583.290411	1164.56627	-0.80441	-0.0004692	2.3032	0.0013434	1.4988	0.00087421	583.2916759756378	75.943	1.3305	76.339	75.784	77.114	0.39507					52	33	2	0	0	0	0.70553	1	8602	8602		44.377	1.981	1	1046400			46514	15038	31295	31308	52509	52509					-0.009432033187067645
QVSTNLLDFE	10	Unmodified	_QVSTNLLDFE_					0	0	0		nc|ENSG00000160282|O95954-3|FTCD;ENSG00000160282|ENST00000397746|FTCD;nc|ENSG00000160282|O95954-2|FTCD	nc|ENSG00000160282|O95954-3|FTCD	nc|ENSG00000160282|O95954-3|FTCD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.2918090820312	2	583.290411	1164.56627	-0.4375	-0.00025519	-0.54916	-0.00032032	-0.98666	-0.00057551	583.2914546218474	75.818	1.4306	76.386	75.46	76.89	0.56836					72	33	4	0	0	0	0.60985	1	8585	8585		49.536	3.0793	1	1497300			46515	15038	31295	31308	52510	52510					-0.009432033187067645
QVSVRTHTKVL	11	Unmodified	_QVSVRTHTKVL_					0	0	0			REV__ENST00000488906.1_1_17:45236559-45237015:-|nuORF	REV__ENST00000488906.1_1_17:45236559-45237015:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.877685546875	2	634.377686	1266.74082	2.2036	0.0013979	-3.0142	-0.0019121	-0.81065	-0.00051426	634.3750780706696	111.6	0.45724	111.65	111.39	111.85	0.041832					52	15	4	0	0	0	0.72739	1	13481	13481		27.047	1.4733	1	7905500	+		46516	27607	31296	31309	52511	52511					0.11811841617122809
QVSVRYLGTKL	11	Unmodified	_QVSVRYLGTKL_					0	0	0			REV__ENST00000332629.6_1_3:196293846-196293930:-|nuORF	REV__ENST00000332629.6_1_3:196293846-196293930:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	632.373291015625	2	632.374612	1262.73467	1.5156	0.00095844	-1.8319	-0.0011584	-0.31625	-0.00019999	632.3734512075463	49.124	0.5274	50.028	49.765	50.292	0.90424					31	12	3	0	0	0	0.39278	2	4791	4779;4791		59.931	8.6635	1	1421900	+		46517	25142	31297	31310	52512;52513	52513					0.11381323385603537
QVSVRYLGTKL	11	Unmodified	_QVSVRYLGTKL_					0	0	0			REV__ENST00000332629.6_1_3:196293846-196293930:-|nuORF	REV__ENST00000332629.6_1_3:196293846-196293930:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	632.374612	1262.73467	-0.11854	-7.4965E-05	-0.21378	-0.00013519	-0.33233	-0.00021016	632.3746140279287	49.296	0.53338	49.756	49.459	49.992	0.45983	-0.13617	0.0012519	NaN	59.931	32	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1288300	+		46518	25142	31297	31310							0.11381323385603537
QVTDCRSLVK	10	Unmodified	_QVTDCRSLVK_					0	0	0		nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.8064575195312	2	574.808248	1147.60194	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.322	1	33.491	32.991	33.991	0.16971								0	0	0	0.45132	1	2392	2392		53.089	5.1294	1				46519	8045	31298	31311	52514	52514					0.03404555657311903
QVTDDALVY	9	Unmodified	_QVTDDALVY_					0	0	0		nc|ENSG00000188372|P21754-2|ZP3;nc|ENSG00000188372|P21754-3|ZP3;ENSG00000188372|ENST00000394857|ZP3	nc|ENSG00000188372|P21754-2|ZP3	nc|ENSG00000188372|P21754-2|ZP3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2337646484375	2	512.253297	1022.49204	-1.0102	-0.0005175	0.11926	6.1093E-05	-0.89098	-0.00045641	512.2534854993323	58.204	0.37502	58.238	57.992	58.367	0.033905					14	10	2	0	0	0	0.20789	1	5320	5320		44.117	16.235	1	49079			46520	7926	31299	31312	52515	52515					-0.018305464102581936
QVTDNSLFKG	10	Unmodified	_QVTDNSLFKG_					0	0	0			REV__nc|ENSG00000012124|P20273-2|CD22	REV__nc|ENSG00000012124|P20273-2|CD22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7898559570312	2	554.785296	1107.55604	0.66113	0.00036678	2.7227	0.0015105	3.3839	0.0018773	554.7867054478468	51.121	2.0515	51.873	51.202	53.253	0.75174					120	49	3	0	0	0	0.49268	1	5195	5195		56.434	1.7114	1	3213200	+		46521	16188	31300	31313	52516	52516					0.006562337466903045
QVTENPNL	8	Unmodified	_QVTENPNL_					0	0	0			REV__ENSG00000114670|ENST00000383366|NEK11	REV__ENSG00000114670|ENST00000383366|NEK11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.7328186035156	2	457.732532	913.45051	0.12761	5.8411E-05	-0.10638	-4.8693E-05	0.02123	9.7176E-06	457.7324191080723	30.194	0.69272	30.104	29.749	30.442	-0.089544					32	15	3	0	0	0	0.93293	1	1967	1967		51.335	0.14276	1	469770	+		46522	18059	31301	31314	52517	52517					-0.009676823789163791
QVTGTGNFYPL	11	Unmodified	_QVTGTGNFYPL_					0	0	0			REV__nc|ENSG00000143355|Q9NQ69-3|LHX9	REV__nc|ENSG00000143355|Q9NQ69-3|LHX9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.802001953125	2	598.800946	1195.58734	-0.77716	-0.00046537	1.0584	0.00063379	0.28126	0.00016842	598.8013448272425	63.345	0.56187	63.345	63.143	63.704	0					43	24	2	0	0	0	0.57736	1	5566	5566		46.457	3.5925	1	108740	+		46523	15435	31302	31315	52518	52518					-0.0026319321918890637
QVTIFLLLYR	10	Unmodified	_QVTIFLLLYR_					0	0	0		ENST00000483443.1_1_2:238664770-238678725:+|nuORF	ENST00000483443.1_1_2:238664770-238678725:+|nuORF	ENST00000483443.1_1_2:238664770-238678725:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.9268493652344	3	422.592058	1264.75434	1.3012	0.00054986	0.095071	4.0176E-05	1.3962	0.00059004	422.59197853531197	58.619	1.7414	58.653	57.951	59.692	0.033905					114	50	3	0	0	0	0.85259	1	5410	5410		20.03	3.3131	1	112420			46524	12512	31303	31316	52519	52519					0.13255699396381715
QVTKSTQNSF	10	Unmodified	_QVTKSTQNSF_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.2892456054688	2	570.288202	1138.56185	-0.95373	-0.0005439	1.8328	0.0010452	0.87908	0.00050133	570.2885730104407	29.693	0.95909	29.714	29.308	30.267	0.021555					35	18	3	0	0	0	0.18739	2	1888	1876;1888		89.029	22.6	1	610480			46525	663	31304	31317	52520;52521	52521					-0.0018866774159960187
QVTKSTQNSF	10	Unmodified	_QVTKSTQNSF_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.2888793945312	2	570.288202	1138.56185	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.846	1	29.757	29.257	30.257	-0.089544								0	0	0	0.001186	1	1924	1924		89.029	32.308	1				46526	663	31304	31317	52522	52522					-0.0018866774159960187
QVTKSTQNSF	10	Unmodified	_QVTKSTQNSF_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	570.288202	1138.56185	-1.4193	-0.00080939	1.6033	0.00091434	0.18403	0.00010495	570.288703741181	29.665	0.86003	29.665	29.348	30.208	0	0.024433	0.0004297	NaN	89.029	36	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70074			46527	663	31304	31317							-0.0018866774159960187
QVTKSTQNSF	10	Unmodified	_QVTKSTQNSF_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	570.288202	1138.56185	-0.72681	-0.00041449	0.46752	0.00026662	-0.25929	-0.00014787	570.2883518823401	29.512	0.34929	29.543	29.389	29.739	0.030945	-0.097666	-0.00086574	NaN	89.029	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22150			46528	663	31304	31317							-0.0018866774159960187
QVTLNYTGQHH	11	Unmodified	_QVTLNYTGQHH_					0	0	0			REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.2554626464844	3	433.214309	1296.6211	-1.5634	-0.0006773	3.5939	0.0015569	2.0305	0.00087965	433.21553590573495	107.12	0.2405	107.26	107.2	107.44	0.13866					7	5	2	0	0	0	0.17273	1	11502	11502		29.551	0	1	109940	+		46529	18513	31305	31318	52523	52523					-0.015347717274380557
QVVARALL	8	Unmodified	_QVVARALL_					0	0	0			REV__ENST00000482704.1_1_2:96692637-96693504:-|nuORF	REV__ENST00000482704.1_1_2:96692637-96693504:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25140380859375	2	435.281995	868.549437	-1.5625	-0.00068012	-2.6712	-0.0011627	-4.2337	-0.0018429	435.28065899223117	79.877	0.27397	80.008	79.839	80.113	0.13086					12	9	2	0	0	0	0.4196	1	7597	7597		25.45	6.0902	1	33402	+		46530	27237	31306	31319	52524	52524					0.10990385376669565
QVVDTVVKVF	10	Unmodified	_QVVDTVVKVF_					0	0	0		ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3297729492188	2	567.331882	1132.64921	-1.2007	-0.00068122	-1.9524	-0.0011076	-3.1531	-0.0017889	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.86471	1	9292	9292		30.318	1.1477	1	5763000			46531	2997	31307	31320	52525	52525					0.0881915819995811
QVVDTVVKVF	10	Unmodified	_QVVDTVVKVF_					0	0	0		ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3289794921875	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.8608	2	9899	9852;9899		34.173	3.6689	1	15673000			46532	2997	31307	31320	52526;52527	52527					0.0881915819995811
QVVDTVVKVF	10	Unmodified	_QVVDTVVKVF_					0	0	0		ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.329833984375	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.82886	1	9364	9364		37.812	12.237	1	18558000			46533	2997	31307	31320	52528	52528					0.0881915819995811
QVVDTVVKVF	10	Unmodified	_QVVDTVVKVF_					0	0	0		ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.329833984375	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86348	3	9285	9285;9297;9597		31.53	3.4483	1	17338000			46534	2997	31307	31320	52529;52530;52531	52529					0.0881915819995811
QVVDTVVKVF	10	Unmodified	_QVVDTVVKVF_					0	0	0		ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3298950195312	2	567.331882	1132.64921	1.2029	0.00068247	-3.4414	-0.0019524	-2.2385	-0.00127	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.67571	2	10527	10515;10527		45.972	3.639	1	4990000			46535	2997	31307	31320	52532;52533	52533					0.0881915819995811
QVVDTVVKVF	10	Unmodified	_QVVDTVVKVF_					0	0	0		ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3304443359375	2	567.331882	1132.64921	-0.50942	-0.00028901	-1.8517	-0.0010506	-2.3612	-0.0013396	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.86272	1	10775	10775		24.519	1.4767	1	5685000			46536	2997	31307	31320	52534	52534					0.0881915819995811
QVVDTVVKVF	10	Unmodified	_QVVDTVVKVF_					0	0	0		ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	ENSG00000117707|ENST00000366958|PROX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3270263671875	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.82886	2	11146	11099;11146		37.812	8.3559	1	6007000			46537	2997	31307	31320	52535;52536	52536					0.0881915819995811
QVVERVFTE	9	Unmodified	_QVVERVFTE_					0	0	0		nc|ENSG00000134333|P00338-5|LDHA	nc|ENSG00000134333|P00338-5|LDHA	nc|ENSG00000134333|P00338-5|LDHA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.2957763671875	2	553.795663	1105.57677	-0.14197	-7.862E-05	-1.1138	-0.00061684	-1.2558	-0.00069546	553.7956902824818	71.77	1.9369	72.32	71.66	73.597	0.55009					121	46	4	0	0	0	0.58668	1	8011	8011		47.657	1.2006	1	1387300			46538	14933	31308	31321	52537	52537					0.02820824126365551
QVVFLGNVIT	10	Unmodified	_QVVFLGNVIT_					0	0	0			REV__ENSG00000163568|ENST00000368130|AIM2	REV__ENSG00000163568|ENST00000368130|AIM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3168334960938	2	545.318774	1088.623	0.15577	8.4944E-05	-3.7365	-0.0020376	-3.5808	-0.0019527	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.57924	1	9245	9245		51.193	6.8155	1	17220000	+		46539	20937	31309	31322	52538	52538					0.08222889028456848
QVVFVPQQPLL	11	Unmodified	_QVVFVPQQPLL_					0	0	0			REV__ENST00000563441.5_1_15:75651254-75660924:-|nuORF	REV__ENST00000563441.5_1_15:75651254-75660924:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3760986328125	2	634.374081	1266.73361	6.6613	0.0042258	-2.0557	-0.0013041	4.6056	0.0029217	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.69995	1	13320	13320		31.53	4.8369	1	7041100	+		46540	19614	31310	31323	52539	52539					0.11091109016706469
QVVGIIVP	8	Unmodified	_QVVGIIVP_					0	0	0			REV__ENST00000393713.7_1_11:71706487-71707358:+|nuORF	REV__ENST00000393713.7_1_11:71706487-71707358:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7674560546875	2	412.765646	823.516739	-1.8818	-0.00077676	3.6465	0.0015051	1.7646	0.00072837	412.7678046235096	51.389	1.3986	51.424	50.891	52.29	0.034584					78	43	3	0	0	0	0.86791	1	4059	4059		28.254	1.4582	1	257640	+		46541	19389	31311	31324	52540	52540					0.0979217825380374
QVVGIIVP	8	Unmodified	_QVVGIIVP_					0	0	0			REV__ENST00000393713.7_1_11:71706487-71707358:+|nuORF	REV__ENST00000393713.7_1_11:71706487-71707358:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7664794921875	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.80706	1	2843	2843		19.36	0	1	818920	+		46542	19389	31311	31324	52541	52541					0.0979217825380374
QVVGLRGAGG	10	Unmodified	_QVVGLRGAGG_					0	0	0		ENST00000482576.1_1_22:24217352-24224826:+|nuORF	ENST00000482576.1_1_22:24217352-24224826:+|nuORF	ENST00000482576.1_1_22:24217352-24224826:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2640380859375	2	457.264333	912.514114	0.21557	9.8573E-05	-0.19878	-9.0895E-05	0.016791	7.678E-06	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.8608	2	7930	7930;8145		34.173	5.023	1	1366100			46543	12489	31312	31325	52542;52543	52542					0.05435722848858404
QVVGLRGAGG	10	Unmodified	_QVVGLRGAGG_					0	0	0		ENST00000482576.1_1_22:24217352-24224826:+|nuORF	ENST00000482576.1_1_22:24217352-24224826:+|nuORF	ENST00000482576.1_1_22:24217352-24224826:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26397705078125	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.86718	1	7524	7524		27.882	1.0861	1	1329900			46544	12489	31312	31325	52544	52544					0.05435722848858404
QVVGLRGAGG	10	Unmodified	_QVVGLRGAGG_					0	0	0		ENST00000482576.1_1_22:24217352-24224826:+|nuORF	ENST00000482576.1_1_22:24217352-24224826:+|nuORF	ENST00000482576.1_1_22:24217352-24224826:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2626037597656	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.8608	1	7751	7751		34.173	0.67956	1	4597500			46545	12489	31312	31325	52545	52545					0.05435722848858404
QVVGLRGAGG	10	Unmodified	_QVVGLRGAGG_					0	0	0		ENST00000482576.1_1_22:24217352-24224826:+|nuORF	ENST00000482576.1_1_22:24217352-24224826:+|nuORF	ENST00000482576.1_1_22:24217352-24224826:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.263427734375	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.85934	1	7680	7680		35.618	2.1027	1	4061400			46546	12489	31312	31325	52546	52546					0.05435722848858404
QVVGLRGAGG	10	Unmodified	_QVVGLRGAGG_					0	0	0		ENST00000482576.1_1_22:24217352-24224826:+|nuORF	ENST00000482576.1_1_22:24217352-24224826:+|nuORF	ENST00000482576.1_1_22:24217352-24224826:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.26348876953125	2	457.264333	912.514114	-0.73369	-0.00033549	0.73239	0.0003349	-0.0013027	-5.9568E-07	457.26455633568185	79.517	3.0273	79.933	78.153	81.18	0.41621					150	71	3	0	0	0	0.5766	1	9123	9123		51.335	14.176	1	894880			46547	12489	31312	31325	52547	52547					0.05435722848858404
QVVHRAFLLSI	11	Unmodified	_QVVHRAFLLSI_					0	0	0		ENSG00000145860|ENST00000424310|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145	ENSG00000145860|ENST00000424310|RNF145	ENSG00000145860|ENST00000424310|RNF145	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8824462890625	2	641.885147	1281.75574	-1.1529	-0.00074004	-3.1	-0.0019899	-4.2529	-0.0027299	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.70737	1	10222	10222		30.318	1.1682	1	3521600			46548	4798	31313	31326	52548	52548					0.12613333485114708
QVVIFATCV	9	Unmodified	_QVVIFATCV_					0	0	0		ENSG00000221989|ENST00000408979|OR2A2	ENSG00000221989|ENST00000408979|OR2A2	ENSG00000221989|ENST00000408979|OR2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	490.266357421875	2	490.267696	978.520839	-0.67208	-0.0003295	1.9364	0.00094935	1.2643	0.00061985	490.26866249477763	83.997	2.9917	84.163	83.319	86.311	0.1651					132	69	2	0	0	0	0.76255	1	8178	8178		35.618	3.6634	1	268130			46549	8693	31314	31327	52549	52549					0.030718996851987868
QVVKKGTLV	9	Unmodified	_QVVKKGTLV_					0	0	0			REV__nc|ENSG00000156709|O95831-4|AIFM1	REV__nc|ENSG00000156709|O95831-4|AIFM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.2849426269531	2	486.316035	970.617516	-0.14978	-7.284E-05	0.016977	8.2563E-06	-0.1328	-6.4584E-05	486.315816087622	21.542	0.70792	20.914	20.676	21.384	-0.62834					35	17	3	0	0	0	0.20789	1	768	768		23.042	2.0956	1	178370	+		46550	20504	31315	31328	52550	52550					0.13103210236670293
QVVKKGTLV	9	Unmodified	_QVVKKGTLV_					0	0	0			REV__nc|ENSG00000156709|O95831-4|AIFM1	REV__nc|ENSG00000156709|O95831-4|AIFM1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	486.316035	970.617516	0.73783	0.00035882	-0.69739	-0.00033915	0.04044	1.9667E-05	486.3155564013213	21.321	0.67879	20.878	20.556	21.235	-0.44324	-0.018233	-0.00031161	NaN	23.042	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164570	+		46551	20504	31315	31328							0.13103210236670293
QVVKLHKM	8	Unmodified	_QVVKLHKM_					0	0	0		ENST00000472109.1_1_17:42797561-42797837:-|nuORF;ENST00000445338.1_1_10:13633913-13634195:-|nuORF;ENST00000454924.1_1_7:63602236-63602701:-|nuORF	ENST00000472109.1_1_17:42797561-42797837:-|nuORF	ENST00000472109.1_1_17:42797561-42797837:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958984375	2	491.796955	981.579357	-1.4864	-0.00073099	-0.75568	-0.00037164	-2.2421	-0.0011026	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.85277	1	4516	4516		25.45	0	1	781720			46552	11821	31316	31329	52551	52551					0.08783001050335315
QVVKLHKM	8	Unmodified	_QVVKLHKM_					0	0	0		ENST00000472109.1_1_17:42797561-42797837:-|nuORF;ENST00000445338.1_1_10:13633913-13634195:-|nuORF;ENST00000454924.1_1_7:63602236-63602701:-|nuORF	ENST00000472109.1_1_17:42797561-42797837:-|nuORF	ENST00000472109.1_1_17:42797561-42797837:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7961120605469	2	491.796955	981.579357	0.29464	0.0001449	-2.8698	-0.0014114	-2.5751	-0.0012664	491.7954245147593	45.248	1.2335	45.291	44.693	45.927	0.042599					75	30	3	0	0	0	0.87479	1	3210	3210		30.504	2.6214	1	440250			46553	11821	31316	31329	52552	52552					0.08783001050335315
QVVKPLHKMV	10	Oxidation (M)	_QVVKPLHKM(Oxidation (M))V_		QVVKPLHKM(1)V		QVVKPLHKM(42)V	0	0	1			REV__chr9:137256428-137263037|13|14.46|0.72|4.33|+|0|NELFB,NELFB|1	REV__chr9:137256428-137263037|13|14.46|0.72|4.33|+|0|NELFB,NELFB|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8557739257812	2	597.855001	1193.69545	-0.56225	-0.00033615	2.6789	0.0016016	2.1167	0.0012655	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.74274	1	9587	9587		42.396	8.4745	1	2042000	+		46554	15930	31317	31330	52553	52553		227			0.10634899830370159
QVVLKGAP	8	Unmodified	_QVVLKGAP_					0	0	0		nc|ENSG00000172534|P51610-2|HCFC1;ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7851867675781	2	406.255446	810.496338	1.2853	0.00052217	2.4074	0.00097803	3.6928	0.0015002	406.25629022906	32.952	1.3994	33.122	32.503	33.902	0.16971					64	32	3	0	0	0	0.4196	1	2450	2450		25.45	4.9683	1	583640			46555	6775	31318	31331	52554	52554					0.08351007593989834
QVVMCHLF	8	Unmodified	_QVVMCHLF_					0	0	0		nc|ENSG00000155034|Q96ME1-2|FBXL18;ENSG00000155034|ENST00000382368|FBXL18;nc|ENSG00000155034|Q96ME1-5|FBXL18;nc|ENSG00000155034|Q96ME1-1|FBXL18	nc|ENSG00000155034|Q96ME1-2|FBXL18	nc|ENSG00000155034|Q96ME1-2|FBXL18	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7828369140625	2	488.740791	975.467029	-0.040273	-1.9683E-05	0.36323	0.00017752	0.32296	0.00015784	488.7404870703842	49.959	0.33112	50.407	50.184	50.515	0.4476					12	7	2	0	0	0	0.4196	1	4898	4898		20.482	0	1	131750			46556	5308	31319	31332	52555	52555					-0.021685960181571318
QVVNIKAKVNR	11	Unmodified	_QVVNIKAKVNR_					0	0	0		ENST00000498228.1_1_1:55014277-55063089:+|nuORF;ENSG00000162390|ENST00000343744|ACOT11;nc|ENSG00000162390|Q8WXI4|ACOT11	ENST00000498228.1_1_1:55014277-55063089:+|nuORF	ENST00000498228.1_1_1:55014277-55063089:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8927001953125	2	634.893503	1267.77245	1.4999	0.00095225	-3.3387	-0.0021197	-1.8389	-0.0011675	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.65746	1	11298	11298		37.812	1.3648	1	68597000			46557	5682	31320	31333	52556	52556					0.1492783437106482
QVVNRAQHQ	9	Unmodified	_QVVNRAQHQ_					0	0	0		nc|ENSG00000102900|Q8N1F7-2|NUP93;ENSG00000102900|ENST00000308159|NUP93	nc|ENSG00000102900|Q8N1F7-2|NUP93	nc|ENSG00000102900|Q8N1F7-2|NUP93	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.2548217773438	2	540.288871	1078.56319	0.15556	8.405E-05	2.0909	0.0011297	2.2465	0.0012138	540.2898884378087	52.151	0.54979	52.128	51.821	52.371	-0.023849					20	12	2	0	0	0	0.20789	1	4557	4557		37.159	14.117	1	99130			46558	2029	31321	31334	52557	52557					0.027050111377775465
QVVNRAQHQ	9	Unmodified	_QVVNRAQHQ_					0	0	0		nc|ENSG00000102900|Q8N1F7-2|NUP93;ENSG00000102900|ENST00000308159|NUP93	nc|ENSG00000102900|Q8N1F7-2|NUP93	nc|ENSG00000102900|Q8N1F7-2|NUP93	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	540.288871	1078.56319	0.28522	0.0001541	2.0185	0.0010906	2.3037	0.0012447	540.2898208600193	52.161	0.51437	52.173	51.925	52.439	0.012436	0.010754	-0.00027971	NaN	29.15	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127330			46559	2029	31321	31334							0.027050111377775465
QVVQPPPPGP	10	Unmodified	_QVVQPPPPGP_					0	0	0			REV__ENSG00000084463|ENST00000261167|WBP11	REV__ENSG00000084463|ENST00000261167|WBP11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.28009033203125	2	508.282192	1014.54983	-0.055639	-2.828E-05	-3.7761	-0.0019193	-3.8318	-0.0019476	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.71042	1	9102	9102		44.117	3.3386	1	1918800	+		46560	16874	31322	31335	52558	52558					0.043137603058426066
QVVRSALAN	9	Unmodified	_QVVRSALAN_					0	0	0		ENST00000557380.5_1_14:50292586-50301128:-|nuORF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF;nc|ENSG00000165525|O60524-3|NEMF;ENSG00000165525|ENST00000298310|NEMF	ENST00000557380.5_1_14:50292586-50301128:-|nuORF	ENST00000557380.5_1_14:50292586-50301128:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27783203125	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.73802	1	8241	8241		37.812	2.1932	1	4644500			46561	6091	31323	31336	52559	52559					0.06031992020314192
QVVVAIVAL	9	Unmodified	_QVVVAIVAL_					0	0	0			REV__ENSG00000168135|ENST00000303592|KCNJ4	REV__ENSG00000168135|ENST00000303592|KCNJ4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3012390136719	2	456.299853	910.585153	0.15231	6.9501E-05	2.9243	0.0013344	3.0766	0.0014039	456.30102814495837	33.268	1.6065	33.378	33.034	34.64	0.10991					186	70	4	0	0	0	0.7932	1	1616	1616		24.203	3.7209	1	1696300	+		46562	21463	31324	31337	52560	52560					0.1262842283365444
QVVVAPVLRSK	11	Unmodified	_QVVVAPVLRSK_					0	0	0		ENST00000447794.1_1_17:18553574-18554852:+|nuORF	ENST00000447794.1_1_17:18553574-18554852:+|nuORF	ENST00000447794.1_1_17:18553574-18554852:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.8876953125	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.66929	1	2741	2741		36.447	4.9169	1	352020			46563	11850	31325	31338	52561	52561					0.1552593111080114
QVVVELIL	8	Unmodified	_QVVVELIL_					0	0	0		ENST00000557830.1_1_14:24710868-24711254:-|nuORF	ENST00000557830.1_1_14:24710868-24711254:-|nuORF	ENST00000557830.1_1_14:24710868-24711254:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7894287109375	2	456.791861	911.569169	-1.8648	-0.0008518	3.8747	0.0017699	2.0099	0.00091811	456.7934584355426	39.935	1.6687	39.935	39.337	41.006	0					122	49	4	0	0	0	0.884	1	2695	2695		33.516	6.7195	1	1012300			46564	13781	31326	31339	52562	52562					0.10984716596760791
QVVVELIL	8	Unmodified	_QVVVELIL_					0	0	0		ENST00000557830.1_1_14:24710868-24711254:-|nuORF	ENST00000557830.1_1_14:24710868-24711254:-|nuORF	ENST00000557830.1_1_14:24710868-24711254:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7930603027344	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.80706	1	2389	2389		19.36	0	1	1834900			46565	13781	31326	31339	52563	52563					0.10984716596760791
QVVVELIL	8	Unmodified	_QVVVELIL_					0	0	0		ENST00000557830.1_1_14:24710868-24711254:-|nuORF	ENST00000557830.1_1_14:24710868-24711254:-|nuORF	ENST00000557830.1_1_14:24710868-24711254:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7931823730469	2	456.791861	911.569169	0.20144	9.2015E-05	2.7795	0.0012696	2.9809	0.0013616	456.79301419254114	38.74	1.332	38.834	38.396	39.728	0.094318					137	38	4	0	0	0	0.80706	1	2289	2289		19.36	1.0356	1	1693200			46566	13781	31326	31339	52564	52564					0.10984716596760791
QVVVGMVPL	9	Oxidation (M)	_QVVVGM(Oxidation (M))VPL_		QVVVGM(1)VPL		QVVVGM(48)VPL	0	0	1			REV__ENSG00000205593|ENST00000413817|DENND6B	REV__ENSG00000205593|ENST00000413817|DENND6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27740478515625	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.58151	1	9692	9692		47.916	13.743	1	5642300	+		46567	23566	31327	31340	52565	52565		362			0.05648186202245142
QVVYDKPIK	9	Unmodified	_QVVYDKPIK_					0	0	0			REV__ENSG00000168246|ENST00000393792|UBTD2	REV__ENSG00000168246|ENST00000393792|UBTD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3167114257812	2	545.318774	1088.623	-1.3538	-0.00073823	-2.3594	-0.0012866	-3.7132	-0.0020249	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.76764	1	10464	10464		34.173	2.2177	1	5184000	+		46568	21471	31328	31341	52566	52566					0.08222889028456848
QVVYSVDGYW	10	Unmodified	_QVVYSVDGYW_					0	0	0		ENST00000515388.1_1_4:144312653-144316050:+|nuORF	ENST00000515388.1_1_4:144312653-144316050:+|nuORF	ENST00000515388.1_1_4:144312653-144316050:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.2811889648438	2	608.287671	1214.56079	-0.42542	-0.00025878	0.52233	0.00031773	0.096913	5.8951E-05	608.287892447858	70.979	0.61301	70.939	70.686	71.299	-0.039001					84	29	4	0	0	0	0.3985	1	6910	6910		64.207	7.4862	1	685590			46569	13083	31329	31342	52567	52567					-0.03790882110502025
QVVYVPVKTG	10	Unmodified	_QVVYVPVKTG_					0	0	0		ENST00000485364.1_1_20:31136574-31172692:-|nuORF;ENSG00000197183|ENST00000621426|NOL4L	ENST00000485364.1_1_20:31136574-31172692:-|nuORF	ENST00000485364.1_1_20:31136574-31172692:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167724609375	2	545.318774	1088.623	0.15103	8.2357E-05	-4.1145	-0.0022437	-3.9634	-0.0021613	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.66675	2	8879	8615;8879		46.457	8.6453	1	5755000			46570	12554	31330	31343	52568;52569	52569					0.08222889028479585
QVVYVPVKTG	10	Unmodified	_QVVYVPVKTG_					0	0	0		ENST00000485364.1_1_20:31136574-31172692:-|nuORF;ENSG00000197183|ENST00000621426|NOL4L	ENST00000485364.1_1_20:31136574-31172692:-|nuORF	ENST00000485364.1_1_20:31136574-31172692:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3169555664062	2	545.318774	1088.623	0.15577	8.4944E-05	-3.7365	-0.0020376	-3.5808	-0.0019527	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.86587	1	9220	9220		29.17	0.020503	1	17220000			46571	12554	31330	31343	52570	52570					0.08222889028479585
QVVYVPVKTG	10	Unmodified	_QVVYVPVKTG_					0	0	0		ENST00000485364.1_1_20:31136574-31172692:-|nuORF;ENSG00000197183|ENST00000621426|NOL4L	ENST00000485364.1_1_20:31136574-31172692:-|nuORF	ENST00000485364.1_1_20:31136574-31172692:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3170166015625	2	545.318774	1088.623	-1.465	-0.00079892	-2.4047	-0.0013113	-3.8697	-0.0021102	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.63899	2	8626	8614;8626		47.96	13.706	1	4998200			46572	12554	31330	31343	52571;52572	52572					0.08222889028479585
QVVYVPVKTG	10	Unmodified	_QVVYVPVKTG_					0	0	0		ENST00000485364.1_1_20:31136574-31172692:-|nuORF;ENSG00000197183|ENST00000621426|NOL4L	ENST00000485364.1_1_20:31136574-31172692:-|nuORF	ENST00000485364.1_1_20:31136574-31172692:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3171997070312	2	545.318774	1088.623	-1.3538	-0.00073823	-2.3594	-0.0012866	-3.7132	-0.0020249	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.70553	3	10370	10370;10380;10561		44.377	10.456	1	5184000			46573	12554	31330	31343	52573;52574;52575	52573					0.08222889028479585
QVWKPKVIR	9	Unmodified	_QVWKPKVIR_					0	0	0		ENSG00000151611|ENST00000649156|MMAA	ENSG00000151611|ENST00000649156|MMAA	ENSG00000151611|ENST00000649156|MMAA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.3663330078125	2	577.36385	1152.71315	3.0575	0.0017653	1.3884	0.0008016	4.4459	0.0025669	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.78536	1	11285	11285		29.15	4.9468	1	11111000			46574	5128	31331	31344	52576	52576					0.14289983147546081
QVWQDFLYD	9	Unmodified	_QVWQDFLYD_					0	0	0		ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	607.2799682617188	2	607.279846	1212.54514	-0.75772	-0.00046015	-0.20827	-0.00012648	-0.96599	-0.00058662	607.279446198653	42.848	0.57951	43.281	43.006	43.586	0.4334					34	13	3	0	0	0	0.47272	1	3848	3848		53.351	2.1588	1	1499600			46575	8979	31332	31345	52577	52577					-0.05263168627561754
QVWQDFLYD	9	Unmodified	_QVWQDFLYD_					0	0	0		ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	607.2796630859375	2	607.279846	1212.54514	-1.7006	-0.0010327	0.5489	0.00033333	-1.1517	-0.00069938	607.2799465144572	42.66	0.54043	43.357	43.091	43.632	0.69754					28	12	3	0	0	0	0.41566	1	3831	3831		56.721	7.185	1	1344500			46576	8979	31332	31345	52578	52578					-0.05263168627561754
QVWQDFLYD	9	Unmodified	_QVWQDFLYD_					0	0	0		ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	607.279846	1212.54514	-1.0238	-0.00062176	-0.67227	-0.00040825	-1.6961	-0.00103	607.279227330895	43.365	0.40492	43.365	43.26	43.665	0	-0.13596	-6.9793E-05	NaN	56.721	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88310			46577	8979	31332	31345							-0.05263168627561754
QVWQDFLYD	9	Unmodified	_QVWQDFLYD_					0	0	0		ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	607.279846	1212.54514	-0.092727	-5.6311E-05	-2.6877	-0.0016322	-2.7804	-0.0016885	607.2780367391019	43.566	0.35947	43.539	43.446	43.805	-0.026764	0.038737	-0.0025177	NaN	56.721	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92071			46578	8979	31332	31345							-0.05263168627561754
QVWQDFLYD	9	Unmodified	_QVWQDFLYD_					0	0	0		ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	607.279846	1212.54514	-0.66514	-0.00040393	-1.9097	-0.0011597	-2.5748	-0.0015636	607.2785625933485	43.623	0.55167	43.587	43.362	43.914	-0.03582	0.086198	-0.0015727	NaN	56.721	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97278			46579	8979	31332	31345							-0.05263168627561754
QVWQDFLYD	9	Unmodified	_QVWQDFLYD_					0	0	0		ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	607.279846	1212.54514	-1.4858	-0.00090228	-0.36642	-0.00022252	-1.8522	-0.0011248	607.2793250907098	43.565	0.40168	43.562	43.412	43.814	-0.002449	0.06154	0.00030168	NaN	56.721	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76797			46580	8979	31332	31345							-0.05263168627561754
QVWQDFLYD	9	Unmodified	_QVWQDFLYD_					0	0	0		ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	607.279846	1212.54514	0.98369	0.00059737	-2.684	-0.0016299	-1.7003	-0.0010325	607.2778931125285	43.676	0.3258	43.685	43.519	43.845	0.0084534	0.18404	-0.0025131	NaN	56.721	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113020			46581	8979	31332	31345							-0.05263168627561754
QVWQDFLYD	9	Unmodified	_QVWQDFLYD_					0	0	0		ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	ENSG00000271503|ENST00000651122|CCL5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	607.279846	1212.54514	0.31277	0.00018994	-2.78	-0.0016882	-2.4672	-0.0014983	607.277701173745	43.679	0.42495	43.629	43.31	43.735	-0.050308	0.12821	-0.0026297	NaN	56.721	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130010			46582	8979	31332	31345							-0.05263168627561754
QVYRLVTYIFV	11	Unmodified	_QVYRLVTYIFV_					0	0	0		ENSG00000005486|ENST00000006777|RHBDD2;nc|ENSG00000005486|Q6NTF9-2|RHBDD2	ENSG00000005486|ENST00000006777|RHBDD2	ENSG00000005486|ENST00000006777|RHBDD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.62359619140625	3	467.602734	1399.78637	0.77079	0.00036042	0.96437	0.00045094	1.7352	0.00081137	467.60222773722546	107.61	0.25216	107.7	107.59	107.84	0.091255					7	5	2	0	0	0	0.17375	1	11566	11566		24.232	0.85391	1	67472			46583	685	31333	31346	52579	52579					0.10247067079512817
QVYSVLPRRLL	11	Unmodified	_QVYSVLPRRLL_					0	0	0			REV__ENST00000487362.1_1_20:36640912-36642208:-|nuORF	REV__ENST00000487362.1_1_20:36640912-36642208:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.6092224121094	3	448.610111	1342.8085	-0.33073	-0.00014837	-1.3466	-0.00060412	-1.6774	-0.00075249	448.60926417433876	75.297	1.2081	75.251	74.823	76.031	-0.045982					90	31	4	0	0	0	0.78683	1	7419	7419		14.086	0	1	359860	+		46584	27573	31334	31347	52580	52580					0.1508129154794915
QWHHFYVHSFI	11	Unmodified	_QWHHFYVHSFI_					0	0	0			REV__ENST00000451333.1_1_2:71037932-71038202:-|nuORF	REV__ENST00000451333.1_1_2:71037932-71038202:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.9100036621094	3	500.910561	1499.70985	-1.7493	-0.00087627	0.62272	0.00031193	-1.1266	-0.00056434	500.91080383390045	64.943	1.039	64.97	64.439	65.478	0.027145					142	37	5	0	0	0	0.74405	1	6180	6180		23.378	0	1	1793600	+		46585	26884	31335	31348	52581	52581					-0.020013116971085765
QWIRPLVA	8	Unmodified	_QWIRPLVA_					0	0	0		ENSG00000164168|ENST00000296582|TMEM184C;nc|ENSG00000164168|Q9NVA4-2|TMEM184C	ENSG00000164168|ENST00000296582|TMEM184C	ENSG00000164168|ENST00000296582|TMEM184C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7959899902344	2	491.795269	981.575986	-0.64291	-0.00031618	1.7291	0.00085035	1.0862	0.00053417	491.79609453871643	50.642	0.51759	50.619	50.252	50.77	-0.02343					22	13	2	0	0	0	0.86791	1	4358	4358		28.254	2.8041	1	333610			46586	5931	31336	31349	52582	52582					0.08446074267976655
QWIYLIHHP	9	Unmodified	_QWIYLIHHP_					0	0	0			REV__nc|ENSG00000135407|O75366-2|AVIL	REV__nc|ENSG00000135407|O75366-2|AVIL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	603.8271484375	2	603.824558	1205.63456	-0.59862	-0.00036146	3.806	0.0022982	3.2074	0.0019367	603.8268481283726	43.91	0.48102	43.877	43.623	44.104	-0.03347					20	11	2	0	0	0	0.7932	1	3485	3485		25.45	1.9275	1	128450	+		46587	19217	31337	31350	52583	52583					0.03997130842481056
QWKDVQRIL	9	Unmodified	_QWKDVQRIL_					0	0	0			REV__nc|ENSG00000173482|P28827|PTPRM	REV__nc|ENSG00000173482|P28827|PTPRM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	593.3446655273438	2	593.340572	1184.66659	3.3538	0.0019899	2.9688	0.0017615	6.3226	0.0037515	593.3422294286001	103.53	2.4934	103.48	103.12	105.61	-0.043755					162	59	4	0	0	0	0.7932	1	11368	11368		26.693	5.0072	1	2080000	+		46588	21928	31338	31351	52584	52584					0.08164498525616182
QWKGALQP	8	Unmodified	_QWKGALQP_					0	0	0			REV__nc|ENSG00000240764|Q9Y5F6-2|PCDHGC5	REV__nc|ENSG00000240764|Q9Y5F6-2|PCDHGC5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2536926269531	2	464.255977	926.497401	-1.1813	-0.00054845	-2.9805	-0.0013837	-4.1619	-0.0019322	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.88915	1	7844	7844		35.201	1.6851	1	946850	+		46589	23815	31339	31352	52585	52585					0.031212219629082938
QWKKKISFV	9	Unmodified	_QWKKKISFV_					0	0	0			REV__nc|ENSG00000119121|Q9BX84-4|TRPM6	REV__nc|ENSG00000119121|Q9BX84-4|TRPM6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353271484375	2	582.350409	1162.68626	3.1803	0.0018521	1.9439	0.001132	5.1242	0.0029841	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.78536	1	11414	11414		29.15	1.2673	1	77008000	+		46590	18339	31340	31353	52586	52586					0.1114287453635825
QWLFKDQSEKY	11	Unmodified	_QWLFKDQSEKY_					0	0	0			REV__nc|ENSG00000251192|Q2M3X9-2|ZNF674	REV__nc|ENSG00000251192|Q2M3X9-2|ZNF674	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.57720947265625	3	491.245386	1470.71433	-1.9663	-0.00096595	-2.9509	-0.0014496	-4.9173	-0.0024156	491.24390598531505	19.16	0.65491	19.16	18.809	19.464	0					70	21	4	0	0	0	0.70847	2	370	365;370		30.139	8.3587	1	480380	+		46591	23872	31341	31354	52587;52588	52588					-0.002198920648879721
QWLRGVSP	8	Unmodified	_QWLRGVSP_					0	0	0		ENST00000551192.5_1_12:49719304-49723306:+|nuORF;ENST00000546735.5_1_12:49717501-49723306:+|nuORF;chr12:49330573-49330661|62|27.55|0.49|5.81|+|ENST00000547923|TROAP,TROAP;ENSG00000135451|ENST00000257909|TROAP	ENST00000551192.5_1_12:49719304-49723306:+|nuORF	ENST00000551192.5_1_12:49719304-49723306:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7908020019531	2	471.761426	941.5083	0.19314	9.1115E-05	1.1052	0.00052137	1.2983	0.00061249	471.76056464045143	28.523	0.37687	28.35	28.091	28.468	-0.17336					15	9	2	0	0	0	0.4196	1	1724	1724		40.573	0	1	34015			46592	130	31342	31355	52589	52589					0.035206243371817436
QWLRRRWWRRE	11	Unmodified	_QWLRRRWWRRE_					0	0	0			REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.6572265625	3	576.653708	1726.93929	0.87753	0.00050603	4.1329	0.0023832	5.0104	0.0028893	576.6556712256094	110.51	1.1389	110.58	110.18	111.32	0.073685					71	37	3	0	0	0	0.88916	1	11887	11887		3.4087	3.0373	1	480690	+		46593	24630	31343	31356	52590	52590					0.10490120039321482
QWLRRRWWRRE	11	Unmodified	_QWLRRRWWRRE_					0	0	0			REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	576.653708	1726.93929	-0.31419	-0.00018118	5.8676	0.0033836	5.5535	0.0032024	576.6563733211841	110.56	1.6081	110.56	109.82	111.43	0	-0.02732	0.0014328	NaN	3.4087	100	53	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191260	+		46594	24630	31343	31356							0.10490120039321482
QWLRRRWWRRE	11	Unmodified	_QWLRRRWWRRE_					0	0	0			REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	576.653708	1726.93929	3.0445	0.0017556	2.3856	0.0013757	5.4301	0.0031313	576.6543553664058	110.68	1.3576	110.65	110.15	111.51	-0.026321	0.064323	-0.004591	NaN	3.4087	111	42	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	391130	+		46595	24630	31343	31356							0.10490120039321482
QWLRRRWWRRE	11	Unmodified	_QWLRRRWWRRE_					0	0	0			REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	576.653708	1726.93929	0.83114	0.00047928	4.0079	0.0023112	4.8391	0.0027905	576.9901612602462	110.59	1.6223	110.63	110.08	111.7	0.031738	0.035903	-0.0017844	NaN	3.4087	124	56	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	520250	+		46596	24630	31343	31356							0.10490120039321482
QWLRRRWWRRE	11	Unmodified	_QWLRRRWWRRE_					0	0	0			REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	576.653708	1726.93929	0.87753	0.00050603	4.1329	0.0023832	5.0104	0.0028893	576.6556712256094	110.51	1.1389	110.58	110.18	111.32	0.073685	-0.00579	-0.0015682	NaN	3.4087	71	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	480690	+		46597	24630	31343	31356							0.10490120039321482
QWLRRRWWRRE	11	Unmodified	_QWLRRRWWRRE_					0	0	0			REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	REV__ENST00000284971.7_1_21:27102007-27107256:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	576.653708	1726.93929	-1.3653	-0.00078732	6.2895	0.0036269	4.9242	0.0028396	576.6570631563376	110.53	0.81099	110.52	110.16	110.97	-0.0074387	-0.067117	0.0021627	NaN	3.4087	54	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	492040	+		46598	24630	31343	31356							0.10490120039321482
QWPFAQVL	8	Unmodified	_QWPFAQVL_					0	0	0			REV__ENSG00000179532|ENST00000254579|DNHD1	REV__ENSG00000179532|ENST00000254579|DNHD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.30078125	2	494.766178	987.517802	-0.07432	-3.6771E-05	-1.6059	-0.00079453	-1.6802	-0.0008313	494.76478780840637	97.555	0.7569	97.612	97.294	98.051	0.056831					23	17	2	0	0	0	0.4196	1	10341	10341		13.775	0	1	138730	+		46599	22341	31344	31357	52591	52591					0.023543926227148404
QWQRTAPGP	9	Unmodified	_QWQRTAPGP_					0	0	0		ENST00000564642.1_1_16:2042626-2043070:+|nuORF;ENSG00000127561|ENST00000248121|SYNGR3	ENST00000564642.1_1_16:2042626-2043070:+|nuORF	ENST00000564642.1_1_16:2042626-2043070:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8184814453125	2	520.76724	1039.51993	0.11895	6.1948E-05	0.95711	0.00049843	1.0761	0.00056038	520.7669562904631	82.383	0.1243	82.857	82.795	82.919	0.47383					4	2	2	0	0	0	0.20789	1	9566	9566		34.173	20.397	1	55040			46600	3507	31345	31358	52592	52592					0.0017482136051967245
QWQRTAPGP	9	Unmodified	_QWQRTAPGP_					0	0	0		ENST00000564642.1_1_16:2042626-2043070:+|nuORF;ENSG00000127561|ENST00000248121|SYNGR3	ENST00000564642.1_1_16:2042626-2043070:+|nuORF	ENST00000564642.1_1_16:2042626-2043070:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	520.76724	1039.51993	0.13755	7.1634E-05	-0.46168	-0.00024043	-0.32413	-0.0001688	520.7669393230433	82.212	0.36271	82.639	82.469	82.831	0.42646	-0.1093	-0.00047811	NaN	34.173	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70100			46601	3507	31345	31358							0.0017482136051967245
QWRRRQRRRVR	11	Unmodified	_QWRRRQRRRVR_					0	0	0		ENST00000370332.5_1_1:92949124-92949509:-|nuORF	ENST00000370332.5_1_1:92949124-92949509:-|nuORF	ENST00000370332.5_1_1:92949124-92949509:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.0036010742188	3	551.668351	1651.98322	0.21641	0.00011939	2.3833	0.0013148	2.5997	0.0014342	551.6696816805156	74.089	0.47975	74.216	74	74.48	0.12711					33	19	2	0	0	0	0.91937	1	6821	6821		1.4188	1.4188	1	147030			46602	10634	31346	31359	52593	52593					0.18331149256300705
QWRRRQRRRVR	11	Unmodified	_QWRRRQRRRVR_					0	0	0		ENST00000370332.5_1_1:92949124-92949509:-|nuORF	ENST00000370332.5_1_1:92949124-92949509:-|nuORF	ENST00000370332.5_1_1:92949124-92949509:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	551.6707153320312	3	551.668351	1651.98322	-0.95917	-0.00052914	3.346	0.0018459	2.3869	0.0013168	551.6701232950942	74.189	0.45739	74.275	74.144	74.602	0.085907					44	19	3	0	0	0	0.92084	1	6820	6820		1.3219	0.95051	1	164540			46603	10634	31346	31359	52594	52594					0.18331149256300705
QWRRRQRRRVR	11	Unmodified	_QWRRRQRRRVR_					0	0	0		ENST00000370332.5_1_1:92949124-92949509:-|nuORF	ENST00000370332.5_1_1:92949124-92949509:-|nuORF	ENST00000370332.5_1_1:92949124-92949509:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	551.668351	1651.98322	0.6128	0.00033806	1.7656	0.00097403	2.3784	0.0013121	551.6693316930304	74.097	0.51482	74.229	74.022	74.537	0.13127	-0.011489	-0.0011287	NaN	1.4188	40	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137720			46604	10634	31346	31359							0.18331149256300705
QWTKIRPRG	9	Unmodified	_QWTKIRPRG_					0	0	0			REV__nc|ENSG00000173193|Q460N5-3|PARP14	REV__nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.3311767578125	2	571.333082	1140.65161	-1.3827	-0.00078998	-2.3234	-0.0013274	-3.7061	-0.0021174	571.3317717910289	102.19	3.5699	102.32	101.59	105.16	0.1357					156	88	4	0	0	0	0.78983	1	10658	10658		27.882	1.0861	1	3715400	+		46605	21898	31347	31360	52595	52595					0.08691051448272447
QWVARPSI	8	Unmodified	_QWVARPSI_					0	0	0			REV__ENSG00000170890|ENST00000308366|PLA2G1B	REV__ENSG00000170890|ENST00000308366|PLA2G1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2800598144531	2	478.769252	955.52395	0.30182	0.0001445	-4.3263	-0.0020713	-4.0245	-0.0019268	478.7685341913493	84.728	0.60073	85.167	84.863	85.464	0.43967					21	14	2	0	0	0	0.4196	1	9836	9836		55.504	9.5523	1	130070	+		46606	21695	31348	31361	52596	52596					0.0444091085423679
QWWRRQWVEEF	11	Unmodified	_QWWRRQWVEEF_					0	0	0		nc|ENSG00000100258|Q9BU23-3|LMF2;nc|ENSG00000100258|Q9BU23-2|LMF2;ENSG00000100258|ENST00000474879|LMF2;ENST00000504717.1_1_22:50941822-50943237:-|nuORF	nc|ENSG00000100258|Q9BU23-3|LMF2	nc|ENSG00000100258|Q9BU23-3|LMF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.6014404296875	3	550.603908	1648.78989	-1.654	-0.0009107	-3.2471	-0.0017879	-4.9011	-0.0026986	550.6021077085894	18.222	0.30806	18.222	18.046	18.354	0					37	13	3	0	0	0	0.79224	3	273	273;276;288		12.957	9.3384	1	190990			46607	1813	31349	31362	52597;52598;52599	52597					-0.00854870093894533
QWWRRQWVEEF	11	Unmodified	_QWWRRQWVEEF_					0	0	0		nc|ENSG00000100258|Q9BU23-3|LMF2;nc|ENSG00000100258|Q9BU23-2|LMF2;ENSG00000100258|ENST00000474879|LMF2;ENST00000504717.1_1_22:50941822-50943237:-|nuORF	nc|ENSG00000100258|Q9BU23-3|LMF2	nc|ENSG00000100258|Q9BU23-3|LMF2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	550.603908	1648.78989	0.10327	5.6863E-05	-5.3297	-0.0029345	-5.2264	-0.0028777	550.6009998113527	18.203	0.56523	18.247	18.086	18.651	0.044048	0.03732	-6.4082E-05	NaN	12.957	48	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	225710			46608	1813	31349	31362							-0.00854870093894533
QWWRRQWVEEF	11	Unmodified	_QWWRRQWVEEF_					0	0	0		nc|ENSG00000100258|Q9BU23-3|LMF2;nc|ENSG00000100258|Q9BU23-2|LMF2;ENSG00000100258|ENST00000474879|LMF2;ENST00000504717.1_1_22:50941822-50943237:-|nuORF	nc|ENSG00000100258|Q9BU23-3|LMF2	nc|ENSG00000100258|Q9BU23-3|LMF2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	550.603908	1648.78989	0.13071	7.1971E-05	-4.9143	-0.0027058	-4.7836	-0.0026339	550.601086767673	18.081	0.25374	18.147	18.013	18.267	0.066296	-0.062119	0.00062205	NaN	12.957	33	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	263610			46609	1813	31349	31362							-0.00854870093894533
QWWRRQWVEEF	11	Unmodified	_QWWRRQWVEEF_					0	0	0		nc|ENSG00000100258|Q9BU23-3|LMF2;nc|ENSG00000100258|Q9BU23-2|LMF2;ENSG00000100258|ENST00000474879|LMF2;ENST00000504717.1_1_22:50941822-50943237:-|nuORF	nc|ENSG00000100258|Q9BU23-3|LMF2	nc|ENSG00000100258|Q9BU23-3|LMF2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	550.603908	1648.78989	0.9352	0.00051493	-6.0311	-0.0033208	-5.0959	-0.0028058	550.600721038679	18.095	0.31398	18.071	17.928	18.242	-0.024035	-0.13856	-0.0012228	NaN	12.957	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	412530			46610	1813	31349	31362							-0.00854870093894533
QYCKKLLKGL	10	Unmodified	_QYCKKLLKGL_					0	0	0		ENST00000468370.5_1_14:30107689-30135322:-|nuORF;ENSG00000184304|ENST00000331968|PRKD1	ENST00000468370.5_1_14:30107689-30135322:-|nuORF	ENST00000468370.5_1_14:30107689-30135322:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.8564453125	2	597.357376	1192.7002	-0.84393	-0.00050413	-1.4489	-0.0008655	-2.2928	-0.0013696	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.85934	1	11008	11008		35.618	4.0885	1	1407500			46611	7598	31350	31363	52600	52600					0.11155783973163125
QYDEAVAQF	9	Unmodified	_QYDEAVAQF_					0	0	0		nc|ENSG00000132780|P49321-4|NASP;ENSG00000132780|ENST00000350030|NASP;nc|ENSG00000132780|P49321-3|NASP;ENST00000529239.1_1_8:61850552-61850903:-|nuORF;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;nc|ENSG00000132780|P49321-2|NASP	nc|ENSG00000132780|P49321-4|NASP	nc|ENSG00000132780|P49321-4|NASP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7431640625	2	535.743096	1069.47164	-0.816	-0.00043717	0.65728	0.00035214	-0.15872	-8.5034E-05	535.7433567835764	61.922	1.4059	62.31	61.866	63.272	0.38846					81	31	4	0	0	0	0.084975	2	6620	6620;6632		96.19	19.416	1	3172900			46612	3827	31351	31364	52601;52602	52601					-0.06031717070072773
QYFNVGLIQP	10	Unmodified	_QYFNVGLIQP_					0	0	0		CON__Q2UVX4	CON__Q2UVX4	CON__Q2UVX4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.8140869140625	2	589.813856	1177.61316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.046	1	46.017	45.517	46.517	-0.028782								0	0	0	0.45132	1	3762	3762		42.396	7.2441	1			+	46613	616	31352	31365	52603	52603					0.03145701023095171
QYHRALVAVLL	11	Unmodified	_QYHRALVAVLL_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8822631835938	2	641.885147	1281.75574	-1.1529	-0.00074004	-3.1	-0.0019899	-4.2529	-0.0027299	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.66312	1	10083	10083		37.159	4.3467	1	3521600			46614	1611	31353	31366	52604	52604					0.12613333485114708
QYKVKGAF	8	Unmodified	_QYKVKGAF_					0	0	0			REV__ENSG00000099331|ENST00000682292|MYO9B	REV__ENSG00000099331|ENST00000682292|MYO9B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7661437988281	2	470.766178	939.517802	-1.9239	-0.00090572	1.9879	0.00093583	0.06397	3.0115E-05	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.87922	1	1492	1492		31.955	2.1133	1	93177	+		46615	17092	31354	31367	52605	52605					0.04562392622710831
QYLLPKMKPLL	11	Unmodified	_QYLLPKMKPLL_					0	0	0			REV__ENST00000307377.12_1_3:33095017-33107044:-|nuORF	REV__ENST00000307377.12_1_3:33095017-33107044:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.6092834472656	3	448.608831	1342.80467	0.51142	0.00022943	0.64148	0.00028777	1.1529	0.0005172	448.60891312566025	75.185	1.0571	75.23	74.705	75.762	0.04509					87	28	4	0	0	0	0.76251	1	7317	7317		19.263	2.7328	1	364530	+		46616	21642	31355	31368	52606	52606					0.146974857298801
QYLWILRK	8	Unmodified	_QYLWILRK_					0	0	0			REV__ENSG00000009335|ENST00000348165|UBE3C	REV__ENSG00000009335|ENST00000348165|UBE3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3425903320312	2	560.337301	1118.66005	3.1463	0.001763	2.2382	0.0012542	5.3845	0.0030171	560.3384571607505	112.87	1.2169	112.84	112.7	113.91	-0.024811					58	33	2	0	0	0	0.80706	1	12606	12606		19.36	1.0356	1	1119600	+		46617	16147	31356	31369	52607	52607					0.10546605364902462
QYNRVNLTL	9	Unmodified	_QYNRVNLTL_					0	0	0		nc|ENSG00000053747|Q16787-3|LAMA3;ENSG00000053747|ENST00000313654|LAMA3	nc|ENSG00000053747|Q16787-3|LAMA3	nc|ENSG00000053747|Q16787-3|LAMA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3054809570312	2	560.809105	1119.60366	1.7722	0.00099386	-1.3647	-0.00076536	0.40744	0.0002285	561.3098603442904	27.246	0.56174	26.991	26.634	27.196	-0.25465					18	12	2	0	0	0	0.20789	1	1586	1586		27.882	3.6795	1	50137			46618	1010	31357	31370	52608	52608					0.04863932737566756
QYRLKVDTLF	10	Unmodified	_QYRLKVDTLF_					0	0	0		ENSG00000115993|ENST00000332624|TRAK2;nc|ENSG00000115993|O60296-2|TRAK2	ENSG00000115993|ENST00000332624|TRAK2	ENSG00000115993|ENST00000332624|TRAK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3641967773438	2	641.861338	1281.70812	-0.046786	-3.003E-05	-1.5534	-0.0009971	-1.6002	-0.0010271	642.3619686544171	113.17	0.33764	113.1	112.9	113.24	-0.067215					42	13	4	0	0	0	0.86272	1	12281	12281		24.519	0	1	78874			46619	2890	31358	31371	52609	52609					0.0785363449426768
QYRVSEKPGN	10	Unmodified	_QYRVSEKPGN_					0	0	0			REV__ENSG00000047936|ENST00000368507|ROS1	REV__ENSG00000047936|ENST00000368507|ROS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3429565429688	2	589.301644	1176.58874	0.83352	0.00049119	2.0754	0.001223	2.9089	0.0017142	589.3043783235695	94.559	0.21014	94.722	94.575	94.785	0.16307					5	4	2	0	0	0	0.37624	1	9655	9655		29.17	6.1276	1	48846	+		46620	16361	31359	31372	52610	52610					0.0075044086956950196
QYWCCCDP	8	Unmodified	_QYWCCCDP_					0	0	0			REV__ENST00000374023.7_2_6:34555964-34556354:-|nuORF	REV__ENST00000374023.7_2_6:34555964-34556354:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.1688537597656	2	509.166798	1016.31904	0.48895	0.00024895	2.47	0.0012576	2.959	0.0015066	509.16807979648974	53.045	1.3729	53.659	53.2	54.573	0.61436					92	32	4	0	0	0	0.85277	1	5414	5414		25.45	2.4077	1	2981900	+		46621	25779	31360	31373	52611	52611					-0.18846275334328766
RAAAAVPR	8	Unmodified	_RAAAAVPR_					0	0	0			REV__ENST00000487852.1_1_13:33590814-33628082:+|nuORF	REV__ENST00000487852.1_1_13:33590814-33628082:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2480163574219	2	406.248486	810.48242	-1.235	-0.0005017	1.527	0.00062034	0.29202	0.00011863	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.89962	1	10564	10564		38.806	5.2906	1	38125000	+		46622	27580	31361	31374	52612	52612					0.06959774885558545
RAAAFRLA	8	Unmodified	_RAAAFRLA_					0	0	0		ENSG00000262814|ENST00000333676|MRPL12	ENSG00000262814|ENST00000333676|MRPL12	ENSG00000262814|ENST00000333676|MRPL12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26519775390625	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.79929	1	2971	2971		18.324	0.8564	1	22029000			46623	8935	31362	31375	52613	52613					0.07144347919654592
RAAAIGHLLR	10	Unmodified	_RAAAIGHLLR_					0	0	0			REV__ENST00000490483.5_3_19:36500194-36502343:-|nuORF	REV__ENST00000490483.5_3_19:36500194-36502343:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.3349609375	2	539.335624	1076.6567	0.46408	0.0002503	-0.54044	-0.00029148	-0.076355	-4.1181E-05	539.3352209245297	17.12	0.21493	17.041	16.915	17.13	-0.079056					13	7	2	0	0	0	0.85934	1	189	189		35.618	5.1146	1	60490	+		46624	23802	31363	31376	52614	52614					0.12143355310877268
RAAARFLAR	9	Unmodified	_RAAARFLAR_					0	0	0		ENSG00000213199|ENST00000349064|ASIC3;nc|ENSG00000213199|Q9UHC3-2|ASIC3;nc|ENSG00000213199|Q9UHC3-3|ASIC3	ENSG00000213199|ENST00000349064|ASIC3	ENSG00000213199|ENST00000349064|ASIC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3132934570312	2	516.314692	1030.61483	-1.5619	-0.00080641	0.27971	0.00014442	-1.2821	-0.00066199	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12684	12684		23.042	0	1	4038100			46625	8581	31364	31377	52615	52615					0.10074799622361752
RAAASLTKTAS	11	Unmodified	_RAAASLTKTAS_					0	0	0			REV__nc|ENSG00000151208|Q8TDM6-2|DLG5	REV__nc|ENSG00000151208|Q8TDM6-2|DLG5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.8065185546875	2	538.806562	1075.59857	-0.69163	-0.00037266	0.94236	0.00050775	0.25073	0.0001351	538.8070299475025	90.865	3.8094	90.865	89.559	93.368	0					216	88	3	0	0	0	0.69248	1	8800	8800		32.751	2.4328	1	563820	+		46626	20240	31365	31378	52616	52616					0.0637962887494723
RAAAVLLSSTG	11	Unmodified	_RAAAVLLSSTG_					0	0	0		ENSG00000167077|ENST00000401548|MEI1;nc|ENSG00000167077|Q5TIA1-5|MEI1;nc|ENSG00000167077|Q5TIA1-3|MEI1;nc|ENSG00000167077|Q5TIA1-2|MEI1	ENSG00000167077|ENST00000401548|MEI1	ENSG00000167077|ENST00000401548|MEI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3037719726562	2	523.303655	1044.59276	-0.17027	-8.9103E-05	0.13508	7.0686E-05	-0.035194	-1.8417E-05	523.3036223327587	91.376	2.6869	91.596	91.26	93.946	0.22013					111	63	2	0	0	0	0.7144	1	9229	9229		29.17	0.020503	1	1188800			46627	6264	31366	31379	52617	52617					0.07224530363282611
RAAEAPIRG	9	Unmodified	_RAAEAPIRG_					0	0	0		ENST00000296677.4_1_5:76114869-76114908:+|nuORF	ENST00000296677.4_1_5:76114869-76114908:+|nuORF	ENST00000296677.4_1_5:76114869-76114908:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7689208984375	2	470.769783	939.525013	0.34379	0.00016185	-2.4863	-0.0011705	-2.1425	-0.0010086	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.66686	1	4411	4411		42.864	0	1	1863100			46628	9748	31367	31380	52618	52618					0.052831252231385406
RAAGPFSPQVG	11	Unmodified	_RAAGPFSPQVG_					0	0	0			REV__ENST00000357058.7_1_9:36400701-36400785:-|nuORF	REV__ENST00000357058.7_1_9:36400701-36400785:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	543.7887573242188	2	543.788173	1085.56179	-0.13722	-7.462E-05	-0.003759	-2.0441E-06	-0.14098	-7.6664E-05	543.7880009644933	33.057	0.747	33.06	32.762	33.509	0.0030785					35	16	3	0	0	0	0.7144	1	1926	1926		29.17	1.2878	1	283920	+		46629	25403	31368	31381	52619	52619					0.02243377049035189
RAAHRGRAG	9	Unmodified	_RAAHRGRAG_					0	0	0		ENST00000320892.10_1_2:7057533-7081179:+|nuORF	ENST00000320892.10_1_2:7057533-7081179:+|nuORF	ENST00000320892.10_1_2:7057533-7081179:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.2685241699219	2	476.270816	950.527078	0.13824	6.5838E-05	2.4302	0.0011574	2.5684	0.0012232	476.271871835513	39.11	0.60444	39.08	38.718	39.322	-0.03027					25	13	2	0	0	0	0.72402	1	2699	2699		38.806	0	1	127120			46630	10033	31369	31382	52620	52620					0.049835987516075875
RAAHRGRAG	9	Unmodified	_RAAHRGRAG_					0	0	0		ENST00000320892.10_1_2:7057533-7081179:+|nuORF	ENST00000320892.10_1_2:7057533-7081179:+|nuORF	ENST00000320892.10_1_2:7057533-7081179:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	476.270816	950.527078	-1.1602	-0.00055257	3.7909	0.0018055	2.6307	0.0012529	476.27248877575016	38.89	0.8116	38.843	38.511	39.322	-0.047001	-0.069672	5.0796E-05	NaN	38.806	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113280			46631	10033	31369	31382							0.049835987516075875
RAAHRGRAG	9	Unmodified	_RAAHRGRAG_					0	0	0		ENST00000320892.10_1_2:7057533-7081179:+|nuORF	ENST00000320892.10_1_2:7057533-7081179:+|nuORF	ENST00000320892.10_1_2:7057533-7081179:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	476.270816	950.527078	-2.6407	-0.0012577	5.1684	0.0024615	2.5277	0.0012038	476.27314329239624	38.804	0.80738	38.815	38.537	39.345	0.011173	-0.097458	0.0013629	NaN	38.806	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108180			46632	10033	31369	31382							0.049835987516075875
RAAIIAKW	8	Unmodified	_RAAIIAKW_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7950134277344	2	464.789987	927.565421	-1.6424	-0.00076336	3.1055	0.0014434	1.4631	0.00068002	464.79130074195194	36.947	2.0594	36.958	35.753	37.812	0.011173					99	45	3	0	0	0	0.91005	1	2463	2463		42.474	8.9589	1	317960	+		46633	23556	31370	31383	52621	52621					0.09874091613551172
RAAKQRKLLE	10	Unmodified	_RAAKQRKLLE_					0	0	0		ENST00000510527.5_1_4:113153247-113186224:+|nuORF;ENSG00000138660|ENST00000274000|AP1AR	ENST00000510527.5_1_4:113153247-113186224:+|nuORF	ENST00000510527.5_1_4:113153247-113186224:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.92291259765625	3	404.922689	1211.74624	0.44862	0.00018165	0.063043	2.5527E-05	0.51166	0.00020718	404.92260093832465	26.168	1.321	26.213	25.795	27.116	0.045507					105	39	4	0	0	0	0.85654	1	1081	1081		21.78	3.2494	1	304530			46634	4315	31371	31384	52622	52622					0.14883565199579607
RAAKRAPRR	9	Unmodified	_RAAKRAPRR_					0	0	0		ENST00000602642.1_1_16:67697561-67697729:-|nuORF;nc|ENSG00000124074|Q9H0I2-2|ENKD1;ENSG00000124074|ENST00000243878|ENKD1	ENST00000602642.1_1_16:67697561-67697729:-|nuORF	ENST00000602642.1_1_16:67697561-67697729:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.2857055664062	2	541.344315	1080.67408	0.90625	0.00049059	0.29038	0.00015719	1.1966	0.00064779	541.844399314434	20.471	0.09215	20.45	20.41	20.502	-0.020924					10	4	3	0	0	0	0.20789	1	488	488		23.042	0	1	50517			46635	3301	31372	31385	52623	52623					0.1369669563653133
RAALEEQRRR	10	Unmodified	_RAALEEQRRR_					0	0	0			REV__ENSG00000189431|ENST00000529419|RASSF10	REV__ENSG00000189431|ENST00000529419|RASSF10	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.8645629882812	2	642.865808	1283.71706	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.1	1	118.02	117.52	118.52	-0.07531								0	0	0	0.45132	1	12677	12677		45.972	1.5951	1		+		46636	23083	31373	31386	52624	52624					0.08655420903301092
RAALGGRRGPL	11	Unmodified	_RAALGGRRGPL_					0	0	0		ENST00000282382.8_2_5:114961385-114961538:-|nuORF	ENST00000282382.8_2_5:114961385-114961538:-|nuORF	ENST00000282382.8_2_5:114961385-114961538:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	562.3433227539062	2	562.343981	1122.67341	-1.412	-0.00079401	0.83639	0.00047034	-0.57558	-0.00032367	562.3442982549859	90.512	3.3727	90.693	89.307	92.679	0.18029					187	79	3	0	0	0	0.70737	1	8976	8976		30.318	1.1477	1	509350			46637	9634	31374	31387	52625	52625					0.11697856196838075
RAALGTRK	8	Unmodified	_RAALGTRK_					0	0	0			REV__ENST00000476983.5_1_1:155238132-155243105:-|nuORF	REV__ENST00000476983.5_1_1:155238132-155243105:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7731018066406	2	436.774868	871.535184	0.064831	2.8317E-05	-2.643	-0.0011544	-2.5782	-0.0011261	436.77360082478805	26.186	0.49975	26.291	25.975	26.474	0.1054					37	22	2	0	0	0	0.81184	1	982	982		19.997	4.355	1	131610	+		46638	27347	31375	31388	52626	52626					0.09427732948370249
RAALKLTQ	8	Unmodified	_RAALKLTQ_					0	0	0			REV__ENSG00000233608|ENST00000612363|TWIST2	REV__ENSG00000233608|ENST00000612363|TWIST2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2633056640625	2	450.784902	899.55525	0.37292	0.00016811	-0.3599	-0.00016224	0.013024	5.8712E-06	450.784487151712	29.942	0.34154	29.853	29.619	29.96	-0.089544					11	7	2	0	0	0	0.4196	1	1918	1918		37.159	0	1	49678	+		46639	18510	31376	31389	52627	52627					0.10145483888311446
RAALPYPQTV	10	Unmodified	_RAALPYPQTV_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-3|DQX1	REV__nc|ENSG00000144045|Q8TE96-3|DQX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	558.3124389648438	2	558.314023	1114.61349	-0.013297	-7.4238E-06	-3.3499	-0.0018703	-3.3632	-0.0018777	558.3123635261824	48.197	1.178	48.104	47.807	48.985	-0.093178					36	28	2	0	0	0	0.86218	1	3644	3644		32.812	1.2826	1	142070	+		46640	19869	31377	31390	52628	52628					0.06077120742929765
RAALYICA	8	Unmodified	_RAALYICA_					0	0	0			REV__ENST00000471247.5_1_3:156868037-156868247:-|nuORF	REV__ENST00000471247.5_1_3:156868037-156868247:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.8010559082031	2	440.739105	879.463658	0.15269	6.7295E-05	3.2599	0.0014368	3.4126	0.0015041	440.7396471600525	21.745	0.32545	21.117	20.952	21.277	-0.62835					9	7	2	0	0	0	0.4196	1	833	833		14.664	7.9286	1	16512	+		46641	20955	31378	31391	52629	52629					0.019104771994761904
RAAPILLRLM	10	Unmodified	_RAAPILLRLM_					0	0	0			REV__ENST00000405876.8_1_12:110354461-110354608:+|nuORF	REV__ENST00000405876.8_1_12:110354461-110354608:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.3665771484375	2	577.365536	1152.71652	-0.9604	-0.0005545	2.6594	0.0015355	1.699	0.00098097	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.86763	1	10934	10934		26.693	3.1702	1	9850700	+		46642	26295	31379	31392	52630	52630					0.14626909929893372
RAARGPTP	8	Unmodified	_RAARGPTP_					0	0	0		ENST00000216039.9_1_22:39096486-39096549:-|nuORF;ENST00000579674.1_1_17:27899162-27899804:+|nuORF;ENSG00000167543|ENST00000301057|TP53I13	ENST00000216039.9_1_22:39096486-39096549:-|nuORF	ENST00000216039.9_1_22:39096486-39096549:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2380676269531	2	413.238119	824.461684	-0.12335	-5.0972E-05	0.56146	0.00023202	0.43812	0.00018105	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.89962	1	7558	7558		38.806	1.7777	1	1978800			46643	6300	31380	31393	52631	52631					0.04243184505889985
RAARLAPG	8	Unmodified	_RAARLAPG_					0	0	0			REV__ENST00000345523.8_1_19:51302184-51307950:-|nuORF	REV__ENST00000345523.8_1_19:51302184-51307950:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.248291015625	2	406.248486	810.48242	3.144	0.0012772	-2.6463	-0.0010751	0.49768	0.00020218	406.2473237922933	114.03	1.1173	114.05	113.12	114.24	0.020027					74	50	2	0	0	0	0.80706	2	13708	13708;13720		19.36	0	1	65995	+		46644	25315	31381	31394	52632;52633	52632					0.06959774885547176
RAASERRRLY	10	Unmodified	_RAASERRRLY_					0	0	0		ENSG00000237289|ENST00000441322|CKMT1B;ENSG00000223572|ENST00000413453|CKMT1A;nc|ENSG00000237289|P12532-2|CKMT1A;ENST00000475589.1_1_15:43886371-43886566:+|nuORF;ENST00000481666.1_1_15:43886371-43886950:+|nuORF	ENSG00000237289|ENST00000441322|CKMT1B	ENSG00000237289|ENST00000441322|CKMT1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	639.8642578125	2	639.362902	1276.71125	1.5682	0.0010027	-2.0313	-0.0012987	-0.46306	-0.00029606	639.3615226756846	110.32	0.45279	110.44	110.27	110.72	0.11659					20	12	3	0	0	0	0.85834	1	11878	11878		22.58	3.4761	1	230740			46645	8699	31382	31395	52634	52634					0.08396322391672584
RAAVSFLTLL	10	Unmodified	_RAAVSFLTLL_					0	0	0			REV__ENSG00000154734|ENST00000284984|ADAMTS1	REV__ENSG00000154734|ENST00000284984|ADAMTS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.316650390625	2	545.834591	1089.65463	-1.3769	-0.00075153	-0.19449	-0.00010616	-1.5713	-0.00085769	545.8347046954285	90.91	0.12024	91.381	91.281	91.401	0.47068					4	2	2	0	0	0	0.37624	1	10803	10803		19.104	10.868	1	55267	+		46646	20397	31383	31396	52635	52635					0.11338881782421595
RACAARLVPP	10	Unmodified	_RACAARLVPP_					0	0	0			REV__ENST00000538966.5_1_X:153039107-153039924:+|nuORF	REV__ENST00000538966.5_1_X:153039107-153039924:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.3053588867188	2	527.302936	1052.59132	1.242	0.00065492	2.5257	0.0013318	3.7677	0.0019867	527.3046705662339	99.127	1.5298	99.174	98.632	100.16	0.047523					112	35	4	0	0	0	0.6116	1	10632	10632		49.442	1.5259	1	1549600	+		46647	28443	31384	31397	52636	52636					0.06712617793550635
RACLQPEPR	9	Unmodified	_RACLQPEPR_					0	0	0			REV__nc|ENSG00000170185|Q8NB14-2|USP38	REV__nc|ENSG00000170185|Q8NB14-2|USP38	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.8671875	2	535.2822	1068.54985	-0.0025989	-1.3911E-06	-0.081269	-4.3502E-05	-0.083868	-4.4893E-05	535.2821137716344	17.259	0.27733	16.648	16.475	16.752	-0.6107					8	5	2	0	0	0	0.20789	1	233	233		34.173	3.8548	1	51710	+		46648	21634	31385	31398	52637	52637					0.018314370342068287
RACRLPPRIIT	11	Unmodified	_RACRLPPRIIT_					0	0	0		ENSG00000198746|ENST00000361720|GPATCH3	ENSG00000198746|ENST00000361720|GPATCH3	ENSG00000198746|ENST00000361720|GPATCH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5980529785156	3	432.595808	1294.76559	2.4108	0.0010429	2.5674	0.0011107	4.9783	0.0021536	432.5968710757986	107.1	1.2973	107.13	106.67	107.97	0.035622					60	30	2	0	0	0	0.76322	1	11724	11724		17.167	0	1	18390000			46649	8320	31386	31399	52638	52638					0.13000198218833248
RACWPWRWREW	11	Unmodified	_RACWPWRWREW_					0	0	0		ENST00000589087.5_1_19:2806818-2807876:+|nuORF	ENST00000589087.5_1_19:2806818-2807876:+|nuORF	ENST00000589087.5_1_19:2806818-2807876:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	409.2911376953125	4	408.700478	1630.7728	-1.9388	-0.00079238	0.56771	0.00023202	-1.3711	-0.00056035	408.95168336770615	18.92	0.52725	18.964	18.726	19.253	0.043747					51	24	3	0	0	0	0.18353	1	397	397		5.1424	1.7337	1	145320			46650	14224	31387	31400	52639	52639					-0.01735069180767823
RADAAGPEPE	10	Unmodified	_RADAAGPEPE_					0	0	0			REV__ENST00000358536.8_1_3:48466741-48470855:-|nuORF	REV__ENST00000358536.8_1_3:48466741-48470855:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7994384765625	2	506.738345	1011.46214	0.14138	7.1644E-05	-3.7864	-0.0019187	-3.645	-0.0018471	506.73610964420783	48.268	0.34046	48.262	48.09	48.43	-0.0056381					11	7	2	0	0	0	0.37624	1	3983	3983		24.519	1.9395	1	48249	+		46651	25436	31388	31401	52640	52640					-0.043134853555670816
RADLFRSRL	9	Unmodified	_RADLFRSRL_					0	0	0			REV__ENST00000538998.1_1_9:128606084-128725334:+|nuORF	REV__ENST00000538998.1_1_9:128606084-128725334:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3299560546875	2	567.330539	1132.64652	-0.54401	-0.00030863	-0.26969	-0.00015301	-0.81371	-0.00046164	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.78124	1	8725	8725		30.318	3.2704	1	4477200	+		46652	21351	31389	31402	52641	52641					0.0855074758567298
RADLFRSRL	9	Unmodified	_RADLFRSRL_					0	0	0			REV__ENST00000538998.1_1_9:128606084-128725334:+|nuORF	REV__ENST00000538998.1_1_9:128606084-128725334:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3295288085938	2	567.330539	1132.64652	0.48094	0.00027285	-1.4928	-0.00084691	-1.0119	-0.00057406	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.7932	1	9016	9016		25.574	0	1	6590100	+		46653	21351	31389	31402	52642	52642					0.0855074758567298
RADLFRSRL	9	Unmodified	_RADLFRSRL_					0	0	0			REV__ENST00000538998.1_1_9:128606084-128725334:+|nuORF	REV__ENST00000538998.1_1_9:128606084-128725334:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3302001953125	2	567.330539	1132.64652	0.27026	0.00015333	-1.2412	-0.00070419	-0.97098	-0.00055087	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.7932	1	11013	11013		23.523	0.94304	1	6007000	+		46654	21351	31389	31402	52643	52643					0.0855074758567298
RAEAEVRP	8	Unmodified	_RAEAEVRP_					0	0	0		ENSG00000167476|ENST00000300961|JSRP1	ENSG00000167476|ENST00000300961|JSRP1	ENSG00000167476|ENST00000300961|JSRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2537841796875	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.90983	1	8041	8041		42.396	1.8235	1	1603800			46655	6293	31390	31403	52644	52644					0.027191324691784757
RAEAGCHGL	9	Unmodified	_RAEAGCHGL_					0	0	0			REV__ENST00000586617.1_1_19:5711860-5720154:-|nuORF	REV__ENST00000586617.1_1_19:5711860-5720154:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79254150390625	2	457.219069	912.423584	-1.2876	-0.00058872	1.4409	0.00065882	0.15331	7.0095E-05	457.21828781178607	38.786	0.80438	39.128	38.856	39.661	0.34187					20	18	2	0	0	0	0.20789	1	3178	3178		31.53	6.0796	1	48071	+		46656	25482	31391	31404	52645	52645					-0.03613069471077779
RAEDRLLMRPT	11	Unmodified	_RAEDRLLMRPT_					0	0	0			REV__ENST00000430382.1_1_2:39193149-39196651:+|nuORF	REV__ENST00000430382.1_1_2:39193149-39196651:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.2484130859375	3	453.250477	1356.7296	0.66324	0.00030061	-3.0868	-0.0013991	-2.4235	-0.0010985	453.24905718399623	23.771	1.0969	23.827	23.444	24.541	0.055487					76	30	3	0	0	0	0.70847	1	871	871		30.139	2.4952	1	185360	+		46657	26602	31392	31405	52646	52646					0.06550696251338195
RAEEQAMRF	9	Unmodified	_RAEEQAMRF_					0	0	0			REV__ENSG00000198952|ENST00000361813|SMG5	REV__ENSG00000198952|ENST00000361813|SMG5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.2759399414062	2	569.277115	1136.53968	-1.0015	-0.00057015	-3.0242	-0.0017216	-4.0257	-0.0022918	569.2753008923387	58.655	0.52158	58.655	58.377	58.898	0					56	23	3	0	0	0	0.51592	1	5085	5085		51.193	4.7359	1	173440	+		46658	23427	31393	31406	52647	52647					-0.02313170691036248
RAEGTDIPT	9	Unmodified	_RAEGTDIPT_					0	0	0		ENST00000521873.1_1_8:79578383-79590923:+|nuORF;ENSG00000104427|ENST00000263849|ZC2HC1A	ENST00000521873.1_1_8:79578383-79590923:+|nuORF	ENST00000521873.1_1_8:79578383-79590923:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.2428894042969	2	480.243264	958.471974	-1.5873	-0.00076229	1.5949	0.00076594	0.0076101	3.6547E-06	480.243773059925	32.707	1.1523	32.706	32.292	33.444	-0.0016365					48	27	3	0	0	0	0.77546	1	1891	1891		31.955	0	1	175860			46659	2131	31394	31407	52648	52648					-0.008922973502080822
RAELVLVSV	9	Unmodified	_RAELVLVSV_					0	0	0			REV__ENSG00000189221|ENST00000338702|MAOA	REV__ENSG00000189221|ENST00000338702|MAOA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.7713317871094	2	493.305667	984.596781	0.16191	7.9869E-05	0.98152	0.00048419	1.1434	0.00056406	493.3059783850238	18.116	0.51176	17.639	17.471	17.983	-0.47694					18	10	3	0	0	0	0.20789	1	371	371		29.15	1.2673	1	109510	+		46660	23070	31395	31408	52649	52649					0.10386619857001733
RAERDHGT	8	Unmodified	_RAERDHGT_					0	0	0			REV__ENST00000531660.5_1_11:47270518-47282963:+|nuORF	REV__ENST00000531660.5_1_11:47270518-47282963:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.2315673828125	2	471.231022	940.447491	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.028	1	17.951	17.451	18.451	-0.07671								0	0	0	0.2939	1	261	261		27.882	2.4321	1		+		46661	26107	31396	31409	52650	52650					-0.025115127130561632
RAERFGATL	9	Unmodified	_RAERFGATL_					0	0	0			REV__ENST00000533629.5_1_11:65144811-65146868:-|nuORF	REV__ENST00000533629.5_1_11:65144811-65146868:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.780029296875	2	510.78289	1019.55123	0.091613	4.6794E-05	-0.25448	-0.00012998	-0.16286	-8.3188E-05	510.7826138521108	26.501	0.82938	26.469	26.1	26.929	-0.032127					35	17	3	0	0	0	0.67345	1	1119	1119		42.396	3.1433	1	143900	+		46662	28350	31397	31410	52651	52651					0.04223394394614388
RAETLKTR	8	Unmodified	_RAETLKTR_					0	0	0			REV__ENSG00000009709|ENST00000420770|PAX7	REV__ENSG00000009709|ENST00000420770|PAX7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7904968261719	2	487.790715	973.566878	-1.0855	-0.00052952	0.66797	0.00032583	-0.41757	-0.00020369	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.87792	1	7640	7640		31.53	2.3803	1	309700	+		46663	16150	31398	31411	52652	52652					0.07903680911658739
RAEVDLQGIKA	11	Unmodified	_RAEVDLQGIKA_					0	0	0		ENSG00000104537|ENST00000419625|ANXA13;nc|ENSG00000104537|P27216-2|ANXA13	ENSG00000104537|ENST00000419625|ANXA13	ENSG00000104537|ENST00000419625|ANXA13	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	600.3429565429688	2	600.340769	1198.66699	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.443	1	28.555	28.055	29.055	0.11225								0	0	0	0.56276	1	1171	1171		38.754	8.25	1				46664	2137	31399	31412	52653	52653					0.07559873454783883
RAEVKRLSH	9	Unmodified	_RAEVKRLSH_					0	0	0		nc|ENSG00000185963|Q8TD16|BICD2;ENSG00000185963|ENST00000356884|BICD2	nc|ENSG00000185963|Q8TD16|BICD2	nc|ENSG00000185963|Q8TD16|BICD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.3744506835938	2	548.322714	1094.63087	0.34399	0.00018862	3.2854	0.0018014	3.6294	0.0019901	548.8257282940056	37.374	0.17517	37.314	37.192	37.367	-0.060333					6	4	2	0	0	0	0.20789	1	2124	2124		22.58	5.1116	1	48261			46665	7763	31400	31413	52654	52654					0.08734461068593191
RAFATLGP	8	Unmodified	_RAFATLGP_					0	0	0		nc|ENSG00000205213|Q9BXB1-2|LGR4;ENSG00000205213|ENST00000379214|LGR4	nc|ENSG00000205213|Q9BXB1-2|LGR4	nc|ENSG00000205213|Q9BXB1-2|LGR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	416.73602294921875	2	416.73742	831.460287	-0.025986	-1.0829E-05	-1.2896	-0.00053742	-1.3156	-0.00054825	416.73691266354535	35.363	0.44613	35.308	35.123	35.569	-0.055153					28	14	4	0	0	0	0.87922	1	1843	1843		31.955	1.4512	1	442650			46666	8516	31401	31414	52655	52655					0.03781550417147628
RAFCLLLRA	9	Unmodified	_RAFCLLLRA_					0	0	0		ENSG00000143869|ENST00000272224|GDF7	ENSG00000143869|ENST00000272224|GDF7	ENSG00000143869|ENST00000272224|GDF7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8180541992188	2	531.815679	1061.6168	1.0705	0.00056928	1.2938	0.00068805	2.3642	0.0012573	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.78983	1	10263	10263		27.882	0	1	4490200			46667	4670	31402	31415	52656	52656					0.08846092315957321
RAFFRLPR	8	Unmodified	_RAFFRLPR_					0	0	0		nc|ENSG00000204634|O95759-2|TBC1D8;nc|ENSG00000204634|O95759|TBC1D8;ENSG00000204634|ENST00000409318|TBC1D8	nc|ENSG00000204634|O95759-2|TBC1D8	nc|ENSG00000204634|O95759-2|TBC1D8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8170166015625	2	531.81961	1061.62467	-1.264	-0.00067223	-3.7858	-0.0020134	-5.0498	-0.0026856	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.84341	1	10463	10463		24.203	0.68005	1	4586300			46668	8473	31403	31416	52657	52657					0.0963198762774482
RAFHAAHQ	8	Unmodified	_RAFHAAHQ_					0	0	0			REV__nc|ENSG00000130731|Q96S19-3|METTL26	REV__nc|ENSG00000130731|Q96S19-3|METTL26	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.2396545410156	2	469.241193	936.467832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.542	1	67.677	67.177	68.177	0.13522								0	0	0	0.29816	1	6032	6032		38.806	7.2763	1		+		46669	18900	31404	31417	52658	52658					-0.002942972625874063
RAFIKVNF	8	Unmodified	_RAFIKVNF_					0	0	0		ENST00000354924.2_1_3:98073116-98073209:+|nuORF	ENST00000354924.2_1_3:98073116-98073209:+|nuORF	ENST00000354924.2_1_3:98073116-98073209:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7953796386719	2	497.795269	993.575986	-1.291	-0.00064263	2.2189	0.0011046	0.92797	0.00046194	497.79630502708676	46.597	0.8435	47.069	46.457	47.3	0.4714					42	20	3	0	0	0	0.87922	1	4390	4390		31.955	6.5047	1	1411700			46670	10344	31405	31418	52659	52659					0.07894074267983342
RAFLPTLS	8	Unmodified	_RAFLPTLS_					0	0	0		ENST00000342427.6_1_20:32379592-32379847:+|nuORF	ENST00000342427.6_1_20:32379592-32379847:+|nuORF	ENST00000342427.6_1_20:32379592-32379847:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.7632751464844	2	452.766178	903.517802	-1.8886	-0.0008551	-4.1399	-0.0018744	-6.0285	-0.0027295	452.76426110841714	39.559	0.86848	39.559	39.19	40.058	0					46	20	3	0	0	0	0.87922	1	2527	2527		31.955	0	1	144770			46671	10261	31406	31419	52660	52660					0.06218392622713509
RAFQLALL	8	Unmodified	_RAFQLALL_					0	0	0			REV__nc|ENSG00000170786|Q8N3Y7-2|SDR16C5	REV__nc|ENSG00000170786|Q8N3Y7-2|SDR16C5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2922668457031	2	466.28982	930.565087	-0.64111	-0.00029894	0.64441	0.00030048	0.0033003	1.5389E-06	466.28999408550436	73.948	1.2575	73.992	73.721	74.978	0.043648					98	48	3	0	0	0	0.86791	1	7215	7215		28.254	0	1	991630	+		46672	21687	31407	31420	52661	52661					0.09702671893705883
RAFRKKTNL	9	Unmodified	_RAFRKKTNL_					0	0	0		ENST00000571720.2_1_16:68596924-68598598:+|nuORF;ENSG00000184939|ENST00000563169|ZFP90	ENST00000571720.2_1_16:68596924-68598598:+|nuORF	ENST00000571720.2_1_16:68596924-68598598:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.33447265625	2	567.348732	1132.68291	0.2734	0.00015512	3.3456	0.0018981	3.619	0.0020532	567.3496487284076	53.334	0.57707	53.747	53.374	53.951	0.4139					14	13	2	0	0	0	0.20789	1	5364	5364		15.642	0	1	162730			46673	7656	31408	31421	52662	52662					0.1218762448236248
RAFRKLMP	8	Unmodified	_RAFRKLMP_					0	0	0			REV__ENST00000609196.5_1_1:147102847-147131108:-|nuORF	REV__ENST00000609196.5_1_1:147102847-147131108:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8035888671875	2	509.802571	1017.59059	0.68681	0.00035014	1.5331	0.0007816	2.2199	0.0011317	509.80326235241614	86.403	4.313	86.552	84.994	89.307	0.14902					345	101	5	0	0	0	0.86288	1	8408	8408		26.796	0	1	3017600	+		46674	20853	31409	31422	52663	52663					0.08249823144490165
RAFYSWGRRKA	11	Unmodified	_RAFYSWGRRKA_					0	0	0		ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.5893859863281	3	466.589822	1396.74764	-0.11305	-5.2749E-05	-1.0216	-0.00047665	-1.1346	-0.00052939	466.589270448406	58.418	0.72167	58.404	58.111	58.833	-0.013641					61	25	4	0	0	0	0.71803	1	5330	5330		28.577	11.41	1	239310			46675	799	31410	31423	52664	52664					0.06513199288338001
RAFYSWGRRKA	11	Unmodified	_RAFYSWGRRKA_					0	0	0		ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	ENSG00000012174|ENST00000379484|MBTPS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.589599609375	3	466.589822	1396.74764	-0.023047	-1.0753E-05	-1.1795	-0.00055034	-1.2025	-0.00056109	466.58915281637627	58.428	0.8177	58.397	58.018	58.836	-0.030888					58	24	3	0	0	0	0.75121	1	5447	5447		21.78	1.4654	1	355430			46676	799	31410	31423	52665	52665					0.06513199288338001
RAGAGRHLGR	10	Unmodified	_RAGAGRHLGR_					0	0	0			REV__ENSG00000176058|ENST00000409012|TPRN	REV__ENSG00000176058|ENST00000409012|TPRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8048095703125	2	525.805023	1049.59549	1.0339	0.00054362	-0.77319	-0.00040655	0.26068	0.00013707	525.80451634497	16.607	0.45287	16.12	15.959	16.412	-0.48718					19	9	3	0	0	0	0.8608	1	152	152		34.173	9.9698	1	348810	+		46677	22104	31411	31424	52666	52666					0.07267843331464974
RAGAVLQH	8	Unmodified	_RAGAVLQH_					0	0	0		ENST00000358994.8_1_9:131909974-131910454:+|nuORF	ENST00000358994.8_1_9:131909974-131910454:+|nuORF	ENST00000358994.8_1_9:131909974-131910454:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.1917419433594	2	426.245944	850.477334	-1.8584	-0.00079212	1.7905	0.00076318	-0.0679	-2.8942E-05	426.24664361609763	95.9	2.2782	96.103	94.862	97.14	0.20242					69	53	2	0	0	0	0.4196	1	9904	9904		35.201	0	1	92031			46678	10421	31412	31425	52667	52667					0.046114710229517186
RAGERKSP	8	Unmodified	_RAGERKSP_					0	0	0		ENST00000531778.1_1_11:134256448-134256499:-|nuORF	ENST00000531778.1_1_11:134256448-134256499:-|nuORF	ENST00000531778.1_1_11:134256448-134256499:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.75439453125	2	450.754133	899.493713	-0.14159	-6.3823E-05	0.143	6.4458E-05	0.0014091	6.3515E-07	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.91472	1	7727	7727		44.117	6.9577	1	109620			46679	13364	31413	31426	52668	52668					0.03994552189044498
RAGFGSDT	8	Unmodified	_RAGFGSDT_					0	0	0			REV__nc|ENSG00000204463|P46379-5|BAG6	REV__nc|ENSG00000204463|P46379-5|BAG6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.68780517578125	2	405.690667	809.366781	-0.34798	-0.00014117	0.90329	0.00036646	0.55531	0.00022529	405.69093560989353	28.751	0.64814	28.712	28.349	28.997	-0.039906					31	20	2	0	0	0	0.4196	1	1461	1461		24.203	0	1	42561	+		46680	23494	31414	31427	52669	52669					-0.04552793755954099
RAGGEFLV	8	Unmodified	_RAGGEFLV_					0	0	0		ENSG00000266074|ENST00000675386|BAHCC1;nc|ENSG00000266074|Q9P281|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.91802978515625	2	424.734877	847.455202	2.5803	0.0010959	-1.7767	-0.00075463	0.80358	0.00034131	424.7338314997892	25.26	0.52704	24.829	24.541	25.068	-0.4311					15	11	2	0	0	0	0.4196	1	1268	1268		12.207	0.69583	1	39505			46681	8950	31415	31428	52670	52670					0.02537246554527428
RAGGGGLVLAI	11	Unmodified	_RAGGGGLVLAI_					0	0	0			REV__nc|ENSG00000032444|Q8IY17-5|PNPLA6	REV__nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.3000793457031	2	492.303458	982.592364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.952	1	58.952	58.452	59.452	0								0	0	0	0.56276	1	5121	5121		35.618	2.8059	1		+		46682	16278	31416	31429	52671	52671					0.10037155434076794
RAGGLSAPA	9	Unmodified	_RAGGLSAPA_					0	0	0			REV__ENST00000494263.5_1_2:219646539-219646824:+|nuORF	REV__ENST00000494263.5_1_2:219646539-219646824:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2256164550781	2	400.224677	798.434801	-0.24227	-9.6962E-05	3.1489	0.0012602	2.9066	0.0011633	400.22586635628164	40.347	1.7799	40.299	40.01	41.79	-0.04789					125	60	3	0	0	0	0.74721	1	2531	2531		37.159	2.9866	1	1238600	+		46683	27713	31417	31430	52672	52672					0.027520758947048307
RAGGLSAPA	9	Unmodified	_RAGGLSAPA_					0	0	0			REV__ENST00000494263.5_1_2:219646539-219646824:+|nuORF	REV__ENST00000494263.5_1_2:219646539-219646824:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.22662353515625	2	400.224677	798.434801	1.1683	0.00046758	3.5853	0.0014349	4.7536	0.0019025	400.2259734207164	34.839	1.4569	35.22	34.977	36.434	0.3812					102	37	3	0	0	0	0.72402	1	2620	2620		38.806	0	1	1604200	+		46684	27713	31417	31430	52673	52673					0.027520758947048307
RAGGQVLLPT	10	Unmodified	_RAGGQVLLPT_					0	0	0		ENST00000216027.7_1_22:29138202-29138283:+|nuORF	ENST00000216027.7_1_22:29138202-29138283:+|nuORF	ENST00000216027.7_1_22:29138202-29138283:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3016052246094	2	506.300916	1010.58728	-1.5945	-0.00080728	1.9293	0.00097679	0.33481	0.00016952	506.30185711798276	96.376	1.2072	96.579	96.02	97.227	0.20241					70	27	3	0	0	0	0.8608	1	9882	9882		34.173	8.5985	1	332450			46685	9126	31418	31431	52674	52674					0.08240851571463281
RAGIRVDN	8	Unmodified	_RAGIRVDN_					0	0	0		ENSG00000152315|ENST00000282146|KCNK13	ENSG00000152315|ENST00000282146|KCNK13	ENSG00000152315|ENST00000282146|KCNK13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7581481933594	2	450.754133	899.493713	-1.5537	-0.00070033	1.6807	0.0007576	0.12705	5.7268E-05	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.91472	1	7815	7815		44.117	6.9577	1	298090			46686	5168	31419	31432	52675	52675					0.03994552189033129
RAGKGLGPGG	10	Unmodified	_RAGKGLGPGG_					0	0	0			REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2533264160156	2	435.251226	868.487899	-1.3354	-0.00058123	1.6938	0.00073721	0.35838	0.00015599	435.2518916713919	77.486	2.837	77.486	75.833	78.67	0					195	121	3	0	0	0	0.86589	2	7022	7022;7113		29.15	0	1	487350	+		46687	24239	31420	31433	52676;52677	52676					0.04839453677391248
RAGKGLGPGG	10	Unmodified	_RAGKGLGPGG_					0	0	0			REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25189208984375	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.84112	4	7547	7462;7547;7629;7783		37.159	3.6795	1	1788100	+		46688	24239	31420	31433	52678;52679;52680;52681	52679					0.04839453677391248
RAGKGLGPGG	10	Unmodified	_RAGKGLGPGG_					0	0	0			REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2512512207031	2	435.251226	868.487899	-0.16621	-7.2343E-05	0.40306	0.00017543	0.23685	0.00010309	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.84112	2	7489	7360;7489		37.159	3.6435	1	768200	+		46689	24239	31420	31433	52682;52683	52683					0.04839453677391248
RAGKGLGPGG	10	Unmodified	_RAGKGLGPGG_					0	0	0			REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.251953125	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.85939	2	7631	7631;7653		29.15	3.6994	1	2823900	+		46690	24239	31420	31433	52684;52685	52684					0.04839453677391248
RAGKGLGPGG	10	Unmodified	_RAGKGLGPGG_					0	0	0			REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25115966796875	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.84112	10	7651	7532;7564;7594;7651;7669;7677;7693;7859;8303;8428		37.159	6.3009	1	3292300	+		46691	24239	31420	31433	52686;52687;52688;52689;52690;52691;52692;52693;52694;52695	52689					0.04839453677391248
RAGKGLGPGG	10	Unmodified	_RAGKGLGPGG_					0	0	0			REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2521667480469	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.67608	8	7501	7433;7493;7501;7551;7671;8096;8167;8313		45.952	8.9161	1	3370400	+		46692	24239	31420	31433	52696;52697;52698;52699;52700;52701;52702;52703	52698					0.04839453677391248
RAGKGLGPGG	10	Unmodified	_RAGKGLGPGG_					0	0	0			REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2522277832031	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.85694	2	7977	7414;7977		29.15	4.6455	1	3322700	+		46693	24239	31420	31433	52704;52705	52705					0.04839453677391248
RAGKGLGPGG	10	Unmodified	_RAGKGLGPGG_					0	0	0			REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25140380859375	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.85694	1	7186	7186		21.96	0.25755	1	712390	+		46694	24239	31420	31433	52706	52706					0.04839453677391248
RAGKGLGPGG	10	Unmodified	_RAGKGLGPGG_					0	0	0			REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.251708984375	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.71042	5	7431	7431;7667;7939;7951;8071		44.117	9.9443	1	2743300	+		46695	24239	31420	31433	52707;52708;52709;52710;52711	52707					0.04839453677391248
RAGKGLGPGG	10	Unmodified	_RAGKGLGPGG_					0	0	0			REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2528991699219	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.74274	8	7992	7146;7156;7285;7706;7861;7910;7957;7992		42.396	8.8806	1	2494100	+		46696	24239	31420	31433	52712;52713;52714;52715;52716;52717;52718;52719	52719					0.04839453677391248
RAGKGLGPGG	10	Unmodified	_RAGKGLGPGG_					0	0	0			REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	REV__ENST00000243878.8_1_16:67700395-67700590:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2511901855469	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.85694	1	9341	9341		21.96	0	1	2020200	+		46697	24239	31420	31433	52720	52720					0.04839453677391248
RAGKHPLSTLK	11	Unmodified	_RAGKHPLSTLK_					0	0	0			REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L	REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7059326171875	3	403.247173	1206.71969	1.5999	0.00064515	-1.4112	-0.00056906	0.18871	7.6095E-05	403.24650363577126	25.16	0.22357	24.831	24.748	24.972	-0.32825					6	4	2	0	0	0	0.17318	1	1278	1278		17.167	8.7595	1	47283	+		46698	29755	31421	31434	52721	52721					0.12459876308253115
RAGLALGPL	9	Unmodified	_RAGLALGPL_					0	0	0		ENST00000492289.5_1_22:45073049-45126704:+|nuORF	ENST00000492289.5_1_22:45073049-45126704:+|nuORF	ENST00000492289.5_1_22:45073049-45126704:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.2732238769531	2	434.27417	866.533787	-0.474	-0.00020585	-0.78373	-0.00034035	-1.2577	-0.0005462	434.2735892156423	82.201	1.4504	82.627	82.08	83.531	0.42646					66	35	3	0	0	0	0.69914	1	9520	9520		40.573	0	1	1211300			46699	12701	31422	31435	52722	52722					0.09518098859598467
RAGLALGPL	9	Unmodified	_RAGLALGPL_					0	0	0		ENST00000492289.5_1_22:45073049-45126704:+|nuORF	ENST00000492289.5_1_22:45073049-45126704:+|nuORF	ENST00000492289.5_1_22:45073049-45126704:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2518615722656	2	434.27417	866.533787	-0.37615	-0.00016335	-0.92225	-0.00040051	-1.2984	-0.00056386	434.27367099724864	80.908	0.85681	81.329	81.018	81.875	0.4215					28	20	2	0	0	0	0.20789	1	9305	9305		33.516	0	1	428440			46700	12701	31422	31435	52723	52723					0.09518098859598467
RAGLGAVAH	9	Unmodified	_RAGLGAVAH_					0	0	0		nc|ENSG00000162458|Q8WUP2-2|FBLIM1	nc|ENSG00000162458|Q8WUP2-2|FBLIM1	nc|ENSG00000162458|Q8WUP2-2|FBLIM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.1914978027344	2	426.245944	850.477334	1.2769	0.00054427	-0.87337	-0.00037227	0.40352	0.000172	426.24544191052746	90.111	2.0233	90.562	89.86	91.883	0.45058					73	51	2	0	0	0	0.20789	1	10830	10830		19.36	0	1	233220			46701	15044	31423	31436	52724	52724					0.0461147102294035
RAGLGYDLC	9	Unmodified	_RAGLGYDLC_					0	0	0		ENST00000473483.1_1_1:201182298-201185067:+|nuORF	ENST00000473483.1_1_1:201182298-201185067:+|nuORF	ENST00000473483.1_1_1:201182298-201185067:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.2358093261719	2	484.236927	966.459301	-0.090701	-4.3921E-05	-1.2582	-0.00060928	-1.3489	-0.0006532	484.23624824193166	87.61	1.1145	87.677	87.401	88.515	0.067711					61	25	4	0	0	0	0.62081	1	8878	8878		45.952	0	1	736890			46702	12282	31424	31437	52725	52725					-0.025270320140975855
RAGLGYDLC	9	Unmodified	_RAGLGYDLC_					0	0	0		ENST00000473483.1_1_1:201182298-201185067:+|nuORF	ENST00000473483.1_1_1:201182298-201185067:+|nuORF	ENST00000473483.1_1_1:201182298-201185067:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.2360534667969	2	484.236927	966.459301	-0.75974	-0.0003679	-1.1272	-0.00054586	-1.887	-0.00091375	484.23638529318964	84.866	0.60439	85.042	84.661	85.265	0.17561					46	13	5	0	0	0	0.72402	1	8291	8291		38.806	0	1	1728500			46703	12282	31424	31437	52726	52726					-0.025270320140975855
RAGLGYDLC	9	Unmodified	_RAGLGYDLC_					0	0	0		ENST00000473483.1_1_1:201182298-201185067:+|nuORF	ENST00000473483.1_1_1:201182298-201185067:+|nuORF	ENST00000473483.1_1_1:201182298-201185067:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2361755371094	2	484.236927	966.459301	0.39551	0.00019152	-2.3516	-0.0011387	-1.9561	-0.00094721	484.23583864352696	86.77	1.4541	87.217	86.978	88.432	0.44629					87	34	4	0	0	0	0.39977	1	10228	10228		57.811	7.7867	1	8816400			46704	12282	31424	31437	52727	52727					-0.025270320140975855
RAGLKLWL	8	Unmodified	_RAGLKLWL_					0	0	0		ENST00000483051.5_1_3:9854969-9859595:+|nuORF;ENST00000496526.5_1_3:9854990-9859595:+|nuORF	ENST00000483051.5_1_3:9854969-9859595:+|nuORF	ENST00000483051.5_1_3:9854969-9859595:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8061218261719	2	478.805637	955.596721	-1.2024	-0.0005757	2.6266	0.0012576	1.4242	0.00068191	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.80706	1	2819	2819		19.36	0	1	361300			46705	12501	31425	31438	52728	52728					0.11714664647661266
RAGLKPPML	9	Unmodified	_RAGLKPPML_					0	0	0		nc|ENSG00000116852|O75037-3|KIF21B;ENSG00000116852|ENST00000461742|KIF21B;nc|ENSG00000116852|O75037-2|KIF21B;nc|ENSG00000116852|O75037|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7955017089844	2	491.796955	981.579357	-1.7104	-0.00084119	-0.84139	-0.00041379	-2.5518	-0.001255	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.74721	1	4031	4031		37.159	2.9866	1	1232600			46706	2951	31426	31439	52729	52729					0.08783001050335315
RAGLKPPML	9	Unmodified	_RAGLKPPML_					0	0	0		nc|ENSG00000116852|O75037-3|KIF21B;ENSG00000116852|ENST00000461742|KIF21B;nc|ENSG00000116852|O75037-2|KIF21B;nc|ENSG00000116852|O75037|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7958679199219	2	491.796955	981.579357	-0.22794	-0.0001121	-2.3551	-0.0011582	-2.583	-0.0012703	491.795700180553	50.73	2.2718	51.177	50.348	52.62	0.4476					135	54	3	0	0	0	0.7932	1	5022	5022		23.042	1.0826	1	1342800			46707	2951	31426	31439	52730	52730					0.08783001050335315
RAGLPMVN	8	Unmodified	_RAGLPMVN_					0	0	0			REV__ENST00000529437.1_1_10:102286710-102289623:-|nuORF	REV__ENST00000529437.1_1_10:102286710-102289623:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	429.2355651855469	2	429.23673	856.458907	-0.17888	-7.6781E-05	-2.1976	-0.0009433	-2.3765	-0.0010201	429.2356452046458	63.375	2.3242	63.37	62.729	65.053	-0.0055504					274	88	5	0	0	0	0.89962	1	5911	5911		38.806	0	1	5346500	+		46708	21254	31427	31440	52731	52731					0.024935930567380638
RAGLQHLAPAH	11	Unmodified	_RAGLQHLAPAH_					0	0	0		ENSG00000157680|ENST00000614521|DGKI;nc|ENSG00000157680|O75912|DGKI	ENSG00000157680|ENST00000614521|DGKI	ENSG00000157680|ENST00000614521|DGKI	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	585.830810546875	2	585.828163	1169.64177	0.36546	0.0002141	3.3088	0.0019384	3.6743	0.0021525	585.8299498087534	57.741	1.3417	57.711	57.197	58.539	-0.029865					92	38	3	0	0	0	0.6921	1	5323	5323		32.812	2.3088	1	120850			46709	5445	31428	31441	52732	52732					0.06373863442877337
RAGLSRPGL	9	Unmodified	_RAGLSRPGL_					0	0	0		ENST00000557237.1_1_14:67708427-67708655:+|nuORF	ENST00000557237.1_1_14:67708427-67708655:+|nuORF	ENST00000557237.1_1_14:67708427-67708655:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7787170410156	2	463.780151	925.545748	-2.226	-0.0010324	-1.7375	-0.00080582	-3.9635	-0.0018382	463.77924988782166	40.526	1.7931	40.918	39.408	41.202	0.39209					79	45	2	0	0	0	0.67345	1	3455	3455		42.396	1.8235	1	9649600			46710	13765	31429	31442	52733	52733					0.07999715602795732
RAGLWVAPL	9	Unmodified	_RAGLWVAPL_					0	0	0		ENST00000517418.5_1_8:21916917-21924359:+|nuORF	ENST00000517418.5_1_8:21916917-21924359:+|nuORF	ENST00000517418.5_1_8:21916917-21924359:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7955322265625	2	491.795269	981.575986	0.21767	0.00010705	0.41627	0.00020472	0.63394	0.00031177	491.79537288056144	45.526	1.3498	45.507	44.705	46.055	-0.018581					75	31	3	0	0	0	0.7932	1	3624	3624		24.203	0	1	529090			46711	13097	31430	31443	52734	52734					0.08446074267999393
RAGLWVAPL	9	Unmodified	_RAGLWVAPL_					0	0	0		ENST00000517418.5_1_8:21916917-21924359:+|nuORF	ENST00000517418.5_1_8:21916917-21924359:+|nuORF	ENST00000517418.5_1_8:21916917-21924359:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.796142578125	2	491.795269	981.575986	-0.0088364	-4.3457E-06	1.0535	0.0005181	1.0447	0.00051376	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.7932	1	4773	4773		24.203	2.2429	1	782460			46712	13097	31430	31443	52735	52735					0.08446074267999393
RAGPIKKP	8	Unmodified	_RAGPIKKP_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7802429199219	2	433.782162	865.549771	-1.7067	-0.00074033	-2.7555	-0.0011953	-4.4622	-0.0019356	433.7819459773158	51.312	5.3307	51.312	50.734	56.065	0					552	155	5	0	0	0	0.79929	1	4537	4537		18.324	5.3652	1	1514200			46713	8446	31431	31444	52736	52736					0.11161805096514854
RAGPIKKP	8	Unmodified	_RAGPIKKP_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7796936035156	2	433.782162	865.549771	-0.12221	-5.3012E-05	-2.9113	-0.0012628	-3.0335	-0.0013159	433.78098025095153	55.241	0.36899	55.233	55.047	55.416	-0.0077057					12	8	2	0	0	0	0.4196	1	4909	4909		12.959	11.962	1	58022			46714	8446	31431	31444	52737	52737					0.11161805096514854
RAGPIKKP	8	Unmodified	_RAGPIKKP_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7800598144531	2	433.782162	865.549771	-0.010793	-4.682E-06	-2.0974	-0.0009098	-2.1082	-0.00091448	433.7811925110709	49.161	2.0028	49.156	48.214	50.217	-0.0056419					87	46	2	0	0	0	0.4196	1	3985	3985		12.959	4.7279	1	3422000			46715	8446	31431	31444	52738	52738					0.11161805096514854
RAGPIKKP	8	Unmodified	_RAGPIKKP_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7798156738281	2	433.782162	865.549771	1.4642	0.00063514	-3.6275	-0.0015735	-2.1633	-0.00093839	433.7805036177892	49.502	1.9755	49.505	48.409	50.385	0.0035973					75	44	2	0	0	0	0.4196	1	4030	4030		31.955	18.996	1	3065200			46716	8446	31431	31444	52739	52739					0.11161805096514854
RAGPIKKP	8	Unmodified	_RAGPIKKP_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799377441406	2	433.782162	865.549771	0.28843	0.00012512	-3.8544	-0.001672	-3.566	-0.0015469	433.78110763255734	50.946	4.0891	50.995	50.343	54.432	0.049896					422	122	5	0	0	0	0.80706	2	4404	4404;4485		25.45	11.675	1	4871400			46717	8446	31431	31444	52740;52741	52740					0.11161805096514854
RAGPIKKP	8	Unmodified	_RAGPIKKP_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7795104980469	2	433.782162	865.549771	-0.46533	-0.00020185	-3.4393	-0.0014919	-3.9046	-0.0016938	433.7814019397393	49.581	1.4611	49.488	48.854	50.315	-0.093178					165	35	5	0	0	0	0.4196	1	3771	3771		12.207	8.5225	1	4508100			46718	8446	31431	31444	52742	52742					0.11161805096514854
RAGPIKKP	8	Unmodified	_RAGPIKKP_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7800598144531	2	433.782162	865.549771	-0.51978	-0.00022547	-3.0782	-0.0013353	-3.598	-0.0015607	433.7814781473535	50.921	3.2949	50.829	50.283	53.578	-0.091797					363	97	5	0	0	0	0.4196	1	4383	4383		12.959	8.9739	1	3862400			46719	8446	31431	31444	52743	52743					0.11161805096514854
RAGPPKHL	8	Unmodified	_RAGPPKHL_					0	0	0		ENST00000444772.3_1_10:21805118-21806168:-|nuORF	ENST00000444772.3_1_10:21805118-21806168:-|nuORF	ENST00000444772.3_1_10:21805118-21806168:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2635192871094	2	438.264136	874.51372	-0.25936	-0.00011367	-1.4504	-0.00063564	-1.7097	-0.00074931	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.85277	1	2808	2808		25.45	0	1	2361100			46720	11815	31432	31445	52744	52744					0.07144347919643224
RAGPRAAL	8	Unmodified	_RAGPRAAL_					0	0	0			REV__ENSG00000167157|ENST00000372469|PRRX2	REV__ENSG00000167157|ENST00000372469|PRRX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24822998046875	2	406.248486	810.48242	3.144	0.0012772	-2.6463	-0.0010751	0.49768	0.00020218	406.2473237922933	114.03	1.1173	114.05	113.12	114.24	0.020027					74	50	2	0	0	0	0.81724	1	13773	13773		14.664	0	1	65995	+		46721	21360	31433	31446	52745	52745					0.06959774885547176
RAGPWVPL	8	Unmodified	_RAGPWVPL_					0	0	0			REV__ENST00000415253.5_1_8:21916870-21927027:+|nuORF	REV__ENST00000415253.5_1_8:21916870-21927027:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2320251464844	2	448.261062	894.507572	-1.3037	-0.00058441	-3.5021	-0.0015699	-4.8059	-0.0021543	448.2593627878643	84.307	1.6314	84.483	83.503	85.135	0.17561					54	37	2	0	0	0	0.4196	1	8072	8072		19.36	7.1531	1	64164	+		46722	26418	31434	31447	52746	52746					0.05609829688125956
RAGPWVPL	8	Unmodified	_RAGPWVPL_					0	0	0			REV__ENST00000415253.5_1_8:21916870-21927027:+|nuORF	REV__ENST00000415253.5_1_8:21916870-21927027:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	448.261062	894.507572	-1.2342	-0.00055323	-3.3416	-0.0014979	-4.5758	-0.0020512	448.25938020245104	84.722	1.3645	84.722	83.732	85.096	0	0.010808	0.00058551	NaN	12.959	43	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54228	+		46723	26418	31434	31447							0.05609829688125956
RAGPWVPL	8	Unmodified	_RAGPWVPL_					0	0	0			REV__ENST00000415253.5_1_8:21916870-21927027:+|nuORF	REV__ENST00000415253.5_1_8:21916870-21927027:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	448.261062	894.507572	-1.0022	-0.00044927	-6.9572	-0.0031186	-7.9594	-0.0035679	448.25675316167485	84.494	0.44289	84.929	84.782	85.225	0.43538	0.21773	-0.0026559	NaN	12.959	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33693	+		46724	26418	31434	31447							0.05609829688125956
RAGRAKIPV	9	Unmodified	_RAGRAKIPV_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23602294921875	2	484.311618	966.608683	-0.52193	-0.00025278	3.1825	0.0015413	2.6606	0.0012885	484.3127099965975	84.8	0.35811	85.248	85.074	85.432	0.44736					10	8	2	0	0	0	0.20789	1	9940	9940		37.159	1.5408	1	92163	+		46725	20542	31435	31448	52747	52747					0.12404281390831784
RAGRGGPR	8	Unmodified	_RAGRGGPR_					0	0	0		ENST00000467201.5_1_7:100174483-100175156:-|nuORF	ENST00000467201.5_1_7:100174483-100175156:-|nuORF	ENST00000467201.5_1_7:100174483-100175156:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.23681640625	2	413.74136	825.468167	-1.5053	-0.0006228	-2.2427	-0.0009279	-3.748	-0.0015507	413.7404624340493	76.888	1.2711	76.977	75.847	77.119	0.089371					110	48	3	0	0	0	0.4196	1	7052	7052		11.511	0	1	407550			46726	12150	31436	31449	52748	52748					0.04845122457288653
RAGRGPGR	8	Unmodified	_RAGRGPGR_					0	0	0		ENST00000590076.2_1_19:46271073-46274920:+|nuORF	ENST00000590076.2_1_19:46271073-46274920:+|nuORF	ENST00000590076.2_1_19:46271073-46274920:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2373352050781	2	413.74136	825.468167	0.49533	0.00020494	-3.8783	-0.0016046	-3.383	-0.0013997	413.739726335296	74.288	1.2924	74.419	73.85	75.143	0.13126					64	45	2	0	0	0	0.4196	1	6929	6929		47.916	0	1	123020			46727	14251	31437	31450	52749	52749					0.04845122457288653
RAGRPGLV	8	Unmodified	_RAGRPGLV_					0	0	0		ENST00000527742.1_1_12:57859296-57859723:+|nuORF	ENST00000527742.1_1_12:57859296-57859723:+|nuORF	ENST00000527742.1_1_12:57859296-57859723:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76708984375	2	413.256311	824.49807	-0.54844	-0.00022664	-1.5704	-0.00064896	-2.1188	-0.0008756	413.2560560858421	49.627	0.81447	49.534	49.029	49.844	-0.093178					20	19	2	0	0	0	0.4196	1	3783	3783		8.2313	0.54101	1	48205			46728	13290	31438	31451	52750	52750					0.0788006140262496
RAGRSPLRG	9	Unmodified	_RAGRSPLRG_					0	0	0			REV__ENST00000309993.2_1_3:135913869-135914463:-|nuORF	REV__ENST00000309993.2_1_3:135913869-135914463:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	485.2844543457031	2	485.288674	968.562795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.842	1	58.842	58.342	59.342	0								0	0	0	0.28889	1	5108	5108		35.152	1.6364	1		+		46729	24877	31439	31452	52751	52751					0.07725636208613196
RAGRTAPP	8	Unmodified	_RAGRTAPP_					0	0	0			REV__ENST00000517894.5_3_8:143530803-143545560:+|nuORF	REV__ENST00000517894.5_3_8:143530803-143545560:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2373352050781	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.89494	1	6929	6929		37.159	8.0096	1	1692300	+		46730	28054	31440	31453	52752	52752					0.04243184505901354
RAGRTAPP	8	Unmodified	_RAGRTAPP_					0	0	0			REV__ENST00000517894.5_3_8:143530803-143545560:+|nuORF	REV__ENST00000517894.5_3_8:143530803-143545560:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2367858886719	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.92457	1	7467	7467		47.916	9.1095	1	1341700	+		46731	28054	31440	31453	52753	52753					0.04243184505901354
RAGSKGNH	8	Unmodified	_RAGSKGNH_					0	0	0			REV__ENSG00000171940|ENST00000371471|ZNF217	REV__ENSG00000171940|ENST00000371471|ZNF217	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1939697265625	2	413.71755	825.420548	-0.076324	-3.1577E-05	3.0679	0.0012693	2.9916	0.0012377	413.7188958087324	78.443	0.12671	79.007	78.91	79.037	0.56332					4	2	2	0	0	0	0.4196	1	8992	8992		37.159	5.2042	1	30455	+		46732	21787	31441	31454	52754	52754					0.0008542346643025667
RAGTFGPQC	9	Unmodified	_RAGTFGPQC_					0	0	0			REV__nc|ENSG00000157168|Q02297-4|NRG1	REV__nc|ENSG00000157168|Q02297-4|NRG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.7232971191406	2	468.721444	935.428335	0.65327	0.0003062	3.0365	0.0014233	3.6897	0.0017295	468.7229384039559	87.468	1.1891	87.618	87.294	88.483	0.14956					52	27	4	0	0	0	0.74721	1	8651	8651		37.159	1.5408	1	560790	+		46733	20532	31442	31455	52755	52755					-0.04196185328316915
RAGTFGPQC	9	Unmodified	_RAGTFGPQC_					0	0	0			REV__nc|ENSG00000157168|Q02297-4|NRG1	REV__nc|ENSG00000157168|Q02297-4|NRG1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	468.721444	935.428335	-1.104	-0.00051747	4.7216	0.0022131	3.6176	0.0016956	468.7240261810437	87.979	0.47923	87.979	87.726	88.205	0	0.24005	0.00034787	NaN	37.159	12	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34896	+		46734	20532	31442	31455							-0.04196185328316915
RAGTFGPQC	9	Unmodified	_RAGTFGPQC_					0	0	0			REV__nc|ENSG00000157168|Q02297-4|NRG1	REV__nc|ENSG00000157168|Q02297-4|NRG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	468.721444	935.428335	-0.11399	-5.3431E-05	4.5422	0.002129	4.4282	0.0020756	468.72335359889206	87.715	0.98506	87.782	87.53	88.515	0.067711	0.042839	0.00017969	NaN	37.159	39	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	155560	+		46735	20532	31442	31455							-0.04196185328316915
RAGTFGPQC	9	Unmodified	_RAGTFGPQC_					0	0	0			REV__nc|ENSG00000157168|Q02297-4|NRG1	REV__nc|ENSG00000157168|Q02297-4|NRG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	468.721444	935.428335	1.1541	0.00054096	3.0772	0.0014424	4.2314	0.0019833	468.72279147039467	87.92	0.68751	87.846	87.552	88.239	-0.073997	0.10709	-0.0011936	NaN	37.159	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	148600	+		46736	20532	31442	31455							-0.04196185328316915
RAGTFGPQC	9	Unmodified	_RAGTFGPQC_					0	0	0			REV__nc|ENSG00000157168|Q02297-4|NRG1	REV__nc|ENSG00000157168|Q02297-4|NRG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	468.721444	935.428335	0.062035	2.9077E-05	4.1876	0.0019628	4.2497	0.0019919	468.7231816709754	87.741	0.73048	87.794	87.47	88.2	0.053032	0.05471	-0.00015269	NaN	37.159	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147790	+		46737	20532	31442	31455							-0.04196185328316915
RAGTFGPQC	9	Unmodified	_RAGTFGPQC_					0	0	0			REV__nc|ENSG00000157168|Q02297-4|NRG1	REV__nc|ENSG00000157168|Q02297-4|NRG1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	468.721444	935.428335	-0.98543	-0.00046189	5.0434	0.0023639	4.0579	0.001902	468.7237063977118	87.334	1.3094	87.535	87.155	88.464	0.20115	-0.20463	0.00064953	NaN	37.159	44	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	488540	+		46738	20532	31442	31455							-0.04196185328316915
RAGTFGPQC	9	Unmodified	_RAGTFGPQC_					0	0	0			REV__nc|ENSG00000157168|Q02297-4|NRG1	REV__nc|ENSG00000157168|Q02297-4|NRG1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	468.721444	935.428335	0.65327	0.0003062	3.0365	0.0014233	3.6897	0.0017295	468.7229384039559	87.468	1.1891	87.618	87.294	88.483	0.14956	-0.12145	-0.0012318	NaN	37.159	52	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	560790	+		46739	20532	31442	31455							-0.04196185328316915
RAGTGRGKLH	10	Unmodified	_RAGTGRGKLH_					0	0	0		ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.8084106445312	2	526.807231	1051.59991	3.1222	0.0016448	-1.628	-0.00085765	1.4942	0.00078713	526.8062549875466	101.13	2.204	101.08	100.09	102.29	-0.052116					131	51	4	0	0	0	0.42393	1	10992	10992		62.107	8.756	1	2494300			46740	13404	31443	31456	52756	52756					0.07617307754389913
RAGTGRGKLH	10	Unmodified	_RAGTGRGKLH_					0	0	0		ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.8084106445312	2	526.807231	1051.59991	0.8285	0.00043646	0.8947	0.00047133	1.7232	0.00090779	526.8075886317766	100.77	1.8367	100.92	100.51	102.34	0.14352					113	44	4	0	0	0	0.20477	2	10550	10550;10610		84.916	11.989	1	2715400			46741	13404	31443	31456	52757;52758	52757					0.07617307754389913
RAGTGRGKLH	10	Unmodified	_RAGTGRGKLH_					0	0	0		ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8084716796875	2	526.807231	1051.59991	2.118	0.0011158	-1.431	-0.00075385	0.68702	0.00036193	526.8064931441075	99.786	1.2202	100.12	99.379	100.6	0.33295					60	16	4	0	0	0	0.28217	2	12100	12088;12100		74.255	13.283	1	16521000			46742	13404	31443	31456	52759;52760	52760					0.07617307754389913
RAGTGRGKLH	10	Unmodified	_RAGTGRGKLH_					0	0	0		ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.808349609375	2	526.807231	1051.59991	2.1591	0.0011374	-1.7045	-0.00089792	0.45462	0.00023949	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.28217	3	12112	12112;12148;12160		74.255	10.048	1	36320000			46743	13404	31443	31456	52761;52762;52763	52761					0.07617307754389913
RAGTGRGKLH	10	Unmodified	_RAGTGRGKLH_					0	0	0		ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8082275390625	2	526.807231	1051.59991	1.8843	0.00099267	-1.1954	-0.00062976	0.68889	0.00036291	526.806675241247	99.062	1.2342	99.425	98.602	99.837	0.36292					102	30	5	0	0	0	0.3985	1	11946	11946		64.207	0	1	32274000			46744	13404	31443	31456	52764	52764					0.07617307754389913
RAGTGRGKLH	10	Unmodified	_RAGTGRGKLH_					0	0	0		ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.808837890625	2	526.807231	1051.59991	2.1723	0.0011444	-1.4363	-0.00075667	0.73601	0.00038774	526.806498827833	99.792	0.95116	100.16	99.637	100.59	0.36292					61	16	4	0	0	0	0.3985	1	12127	12127		64.207	0	1	16717000			46745	13404	31443	31456	52765	52765					0.07617307754389913
RAGTGRGKLH	10	Unmodified	_RAGTGRGKLH_					0	0	0		ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	ENST00000534268.5_1_15:79237012-79237186:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8082885742188	2	526.807231	1051.59991	2.4511	0.0012913	-1.9686	-0.001037	0.48256	0.00025421	526.8063545435555	100.49	2.2675	100.83	100.38	102.64	0.34591					144	58	4	0	0	0	0.3985	1	12222	12222		64.207	5.4253	1	37709000			46746	13404	31443	31456	52766	52766					0.07617307754389913
RAGTPPPLA	9	Unmodified	_RAGTPPPLA_					0	0	0			REV__ENST00000568177.1_1_14:103994764-103994866:-|nuORF	REV__ENST00000568177.1_1_14:103994764-103994866:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.25634765625	2	440.255977	878.497401	0.48837	0.00021501	-1.5877	-0.000699	-1.0993	-0.00048399	440.2553200536456	72.771	0.86505	72.902	72.395	73.26	0.13064					39	28	2	0	0	0	0.7932	1	6709	6709		24.203	0	1	97421	+		46747	28895	31444	31457	52767	52767					0.05329221962892916
RAGTSKLH	8	Unmodified	_RAGTSKLH_					0	0	0		ENST00000252711.6_1_2:240900063-240900423:-|nuORF	ENST00000252711.6_1_2:240900063-240900423:-|nuORF	ENST00000252711.6_1_2:240900063-240900423:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2528381347656	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87479	1	8246	8246		30.504	7.4669	1	2823900			46748	9312	31445	31458	52768	52768					0.048394536773685104
RAGTSKLH	8	Unmodified	_RAGTSKLH_					0	0	0		ENST00000252711.6_1_2:240900063-240900423:-|nuORF	ENST00000252711.6_1_2:240900063-240900423:-|nuORF	ENST00000252711.6_1_2:240900063-240900423:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2515563964844	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.87922	1	7702	7702		31.955	1.4512	1	3292300			46749	9312	31445	31458	52769	52769					0.048394536773685104
RAGTSKLH	8	Unmodified	_RAGTSKLH_					0	0	0		ENST00000252711.6_1_2:240900063-240900423:-|nuORF	ENST00000252711.6_1_2:240900063-240900423:-|nuORF	ENST00000252711.6_1_2:240900063-240900423:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25225830078125	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.86288	1	7914	7914		26.796	0	1	2743300			46750	9312	31445	31458	52770	52770					0.048394536773685104
RAGVAAVRL	9	Unmodified	_RAGVAAVRL_					0	0	0			REV__nc|ENSG00000114054|P05166-2|PCCB	REV__nc|ENSG00000114054|P05166-2|PCCB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7906188964844	2	456.790518	911.566484	0.18235	8.3295E-05	3.5287	0.0016119	3.7111	0.0016952	456.79200220887	40.258	1.2138	40.227	39.65	40.864	-0.030987					94	32	4	0	0	0	0.7932	1	2944	2944		23.042	0	1	1159000	+		46751	18027	31446	31459	52771	52771					0.10716305982452923
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7956848144531	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.78058	1	3453	3453		30.504	2.2494	1	2891800	+		46752	17097	31447	31460	52772	52772					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7963562011719	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.7932	1	4190	4190		25.45	2.4077	1	1240000	+		46753	17097	31447	31460	52773	52773					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79583740234375	2	491.795269	981.575986	-1.4502	-0.0007132	2.5925	0.001275	1.1423	0.00056177	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.77546	1	4728	4728		31.955	6.5047	1	1043600	+		46754	17097	31447	31460	52774	52774					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79571533203125	2	491.795269	981.575986	0.09879	4.8585E-05	0.95013	0.00046727	1.0489	0.00051585	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.7932	1	4102	4102		24.203	1.1603	1	1349600	+		46755	17097	31447	31460	52775	52775					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7961730957031	2	491.795269	981.575986	0.019467	9.5736E-06	1.1365	0.00055891	1.1559	0.00056849	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.58151	1	4499	4499		47.916	15.961	1	310050	+		46756	17097	31447	31460	52776	52776					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.2979431152344	2	491.795269	981.575986	-0.035071	-1.7248E-05	1.1757	0.00057819	1.1406	0.00056094	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.7932	1	4988	4988		24.203	3.7209	1	1625300	+		46757	17097	31447	31460	52777	52777					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7961730957031	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.953	1	56.941	56.441	57.441	-0.012203								0	0	0	0.31472	1	5125	5125		25.45	0	1		+		46758	17097	31447	31460	52778	52778					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7959899902344	2	491.795269	981.575986	-0.36021	-0.00017715	1.3022	0.0006404	0.94195	0.00046325	491.79587618632917	55.368	1.5692	55.341	54.702	56.271	-0.027279					123	47	4	0	0	0	0.7932	1	5066	5066		24.203	3.7209	1	1374900	+		46759	17097	31447	31460	52779	52779					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7957763671875	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.7932	1	4007	4007		24.203	0	1	1232600	+		46760	17097	31447	31460	52780	52780					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79583740234375	2	491.795269	981.575986	-1.7961	-0.00088329	2.9764	0.0014638	1.1803	0.00058047	491.7966581870457	51.567	1.6539	51.579	50.697	52.351	0.012436					117	46	3	0	0	0	0.77546	1	4484	4484		31.955	1.4512	1	354980	+		46761	17097	31447	31460	52781	52781					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7956848144531	2	491.795269	981.575986	-2.0878	-0.0010268	2.9764	0.0014638	0.88855	0.00043698	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.78536	1	5064	5064		29.15	1.2673	1	1484300	+		46762	17097	31447	31460	52782	52782					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7965393066406	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.76996	1	3890	3890		33.516	1.5607	1	1219600	+		46763	17097	31447	31460	52783	52783					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956237792969	2	491.795269	981.575986	-0.71044	-0.00034939	1.6504	0.00081164	0.93993	0.00046225	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.7932	1	4189	4189		23.042	0.0057756	1	571510	+		46764	17097	31447	31460	52784	52784					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79583740234375	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.7932	1	3499	3499		25.45	3.7478	1	3201400	+		46765	17097	31447	31460	52785	52785					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7960510253906	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.77546	1	4128	4128		31.955	1.4512	1	581270	+		46766	17097	31447	31460	52786	52786					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79547119140625	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.77546	1	4213	4213		31.955	2.1133	1	748320	+		46767	17097	31447	31460	52787	52787					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7967529296875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.04	1	64.164	63.664	64.664	0.12397								0	0	0	0.35186	1	5634	5634		47.916	5.5195	1		+		46768	17097	31447	31460	52788	52788					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7955322265625	2	491.795269	981.575986	-0.12437	-6.1163E-05	0.93789	0.00046125	0.81352	0.00040009	491.7955803973609	45.417	1.3583	45.348	44.556	45.914	-0.06863					81	33	3	0	0	0	0.77546	1	3261	3261		31.955	4.0726	1	439300	+		46769	17097	31447	31460	52789	52789					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7960205078125	2	491.795269	981.575986	-0.17405	-8.5598E-05	1.0809	0.00053159	0.90686	0.00044599	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.5393	1	3446	3446		50.025	12.996	1	2994900	+		46770	17097	31447	31460	52790	52790					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7956848144531	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.78058	1	3787	3787		30.504	3.7075	1	1502200	+		46771	17097	31447	31460	52791	52791					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7955322265625	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.77546	1	4148	4148		31.955	7.7521	1	412030	+		46772	17097	31447	31460	52792	52792					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7961730957031	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.7932	1	4598	4598		24.203	2.2429	1	1898900	+		46773	17097	31447	31460	52793	52793					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7963562011719	2	491.795269	981.575986	-0.53143	-0.00026136	1.9035	0.00093611	1.372	0.00067476	491.79619139735206	56.69	1.2684	56.664	56.294	57.562	-0.026108					93	62	2	0	0	0	0.7932	1	4813	4813		24.203	0	1	1036100	+		46774	17097	31447	31460	52794	52794					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.796142578125	2	491.795269	981.575986	-0.48962	-0.00024079	1.5802	0.00077716	1.0906	0.00053636	491.7959072795416	52.767	1.4912	53.191	52.596	54.087	0.42348					103	35	4	0	0	0	0.77546	3	5280	5269;5280;5303		31.955	2.8053	1	2146400	+		46775	17097	31447	31460	52795;52796;52797	52796					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7952880859375	2	491.795269	981.575986	-1.2395	-0.00060959	1.4172	0.00069695	0.17764	8.7362E-05	491.7958275421146	44.647	1.7443	45.492	44.612	46.357	0.84437					115	42	4	0	0	0	0.77546	1	4083	4083		31.955	5.1588	1	6753400	+		46776	17097	31447	31460	52798	52798					0.08446074267999393
RAGVAPWLL	9	Unmodified	_RAGVAPWLL_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7952880859375	2	491.795269	981.575986	-0.91317	-0.00044909	1.7019	0.00083701	0.78877	0.00038791	491.79595933805444	45.694	2.2667	46.589	46.327	48.594	0.89542					151	55	4	0	0	0	0.77546	1	4318	4318		31.955	3.7006	1	3110500	+		46777	17097	31447	31460	52799	52799					0.08446074267999393
RAGVIKVW	8	Unmodified	_RAGVIKVW_					0	0	0		nc|ENSG00000116852|O75037-3|KIF21B;ENSG00000116852|ENST00000461742|KIF21B;nc|ENSG00000116852|O75037-2|KIF21B;nc|ENSG00000116852|O75037|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	nc|ENSG00000116852|O75037-3|KIF21B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7904052734375	2	464.789987	927.565421	-1.1101	-0.00051598	2.5453	0.001183	1.4351	0.00066703	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.86288	1	2142	2142		26.796	3.7594	1	415400			46778	2951	31448	31461	52800	52800					0.09874091613551172
RAGVKVGGP	9	Unmodified	_RAGVKVGGP_					0	0	0			REV__ENST00000328914.4_1_7:4810677-4810839:+|nuORF	REV__ENST00000328914.4_1_7:4810677-4810839:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.7556457519531	2	420.756144	839.497735	0.83426	0.00035102	-2.8991	-0.0012198	-2.0648	-0.00086878	420.75480151347654	20.751	1.3708	20.819	19.836	21.206	0.068251					89	57	2	0	0	0	0.7932	1	507	507		23.042	2.5607	1	62277	+		46779	25100	31449	31462	52801	52801					0.0715664168276362
RAGVRGRP	8	Unmodified	_RAGVRGRP_					0	0	0			REV__ENST00000482692.1_1_7:28449401-28450235:+|nuORF	REV__ENST00000482692.1_1_7:28449401-28450235:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7803039550781	2	434.764835	867.515117	-0.046559	-2.0242E-05	-4.0574	-0.001764	-4.1039	-0.0017842	434.7630503130844	37.157	0.66822	37.133	36.771	37.439	-0.023979					19	14	2	0	0	0	0.4196	1	2397	2397		44.531	26.207	1	28644	+		46780	27471	31450	31463	52802	52802					0.07605982008419687
RAGVRQRIRK	10	Unmodified	_RAGVRQRIRK_					0	0	0		ENSG00000196376|ENST00000360388|SLC35F1	ENSG00000196376|ENST00000360388|SLC35F1	ENSG00000196376|ENST00000360388|SLC35F1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.9320373535156	3	413.933811	1238.7796	0.19564	8.098E-05	-3.0864	-0.0012776	-2.8908	-0.0011966	413.93253835270247	43.14	1.6907	43.113	41.995	43.686	-0.026768					75	40	2	0	0	0	0.85834	1	3329	3329		22.58	0.018069	1	425020			46781	8047	31451	31464	52803	52803					0.1697661176215206
RAGVRQRIRK	10	Unmodified	_RAGVRQRIRK_					0	0	0		ENSG00000196376|ENST00000360388|SLC35F1	ENSG00000196376|ENST00000360388|SLC35F1	ENSG00000196376|ENST00000360388|SLC35F1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9331970214844	3	413.933811	1238.7796	-1.8924	-0.00078334	-0.5912	-0.00024472	-2.4836	-0.0010281	413.93347709098015	44.87	2.8248	44.882	43.566	46.391	0.012058					191	71	4	0	0	0	0.85441	1	3281	3281		20.837	1.5745	1	675440			46782	8047	31451	31464	52804	52804					0.1697661176215206
RAGWGLLP	8	Unmodified	_RAGWGLLP_					0	0	0		ENST00000450554.6_1_19:56185440-56185578:+|nuORF	ENST00000450554.6_1_19:56185440-56185578:+|nuORF	ENST00000450554.6_1_19:56185440-56185578:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2520446777344	2	435.253237	868.491922	-0.16621	-7.2343E-05	-4.2181	-0.0018359	-4.3843	-0.0019083	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.87276	1	7427	7427		29.842	0.69198	1	768200			46783	11890	31452	31465	52805	52805					0.0524154317108696
RAGWPLGL	8	Unmodified	_RAGWPLGL_					0	0	0			REV__ENST00000167106.8_2_14:77228565-77228700:+|nuORF	REV__ENST00000167106.8_2_14:77228565-77228700:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25201416015625	2	435.253237	868.491922	-1.1061	-0.00048143	-3.4341	-0.0014947	-4.5402	-0.0019761	435.2516688804781	93.233	1.4228	93.233	92.721	94.144	0					80	32	3	0	0	0	0.86791	1	9190	9190		28.254	0	1	477960	+		46784	24079	31453	31466	52806	52806					0.0524154317108696
RAGYKFKL	8	Unmodified	_RAGYKFKL_					0	0	0			REV__nc|ENSG00000122966|O14578|CIT	REV__nc|ENSG00000122966|O14578|CIT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79583740234375	2	491.795269	981.575986	-0.72034	-0.00035426	1.4985	0.00073695	0.77816	0.00038269	491.7958614454625	45.142	1.3703	45.154	44.592	45.963	0.012058					80	34	3	0	0	0	0.81548	1	3270	3270		20.482	0	1	396090	+		46785	18521	31454	31467	52807	52807					0.08446074267999393
RAGYKFKL	8	Unmodified	_RAGYKFKL_					0	0	0			REV__nc|ENSG00000122966|O14578|CIT	REV__nc|ENSG00000122966|O14578|CIT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79510498046875	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.80706	1	4183	4183		19.36	0	1	581270	+		46786	18521	31454	31467	52808	52808					0.08446074267999393
RAHAAPHLA	9	Unmodified	_RAHAAPHLA_					0	0	0			REV__ENSG00000006283|ENST00000359106|CACNA1G	REV__ENSG00000006283|ENST00000359106|CACNA1G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2649230957031	2	472.264668	942.514782	0.76763	0.00036253	-1.8246	-0.00086169	-1.057	-0.00049917	472.2636171025307	20.516	0.59324	20.057	19.687	20.28	-0.4591					16	12	2	0	0	0	0.76996	1	669	669		33.516	3.0119	1	79193	+		46787	16099	31455	31468	52809	52809					0.04122562288534937
RAHFWLHFLL	10	Unmodified	_RAHFWLHFLL_					0	0	0		nc|ENSG00000142733|O95382-3|MAP3K6;ENSG00000142733|ENST00000357582|MAP3K6;nc|ENSG00000142733|O95382-2|MAP3K6	nc|ENSG00000142733|O95382-3|MAP3K6	nc|ENSG00000142733|O95382-3|MAP3K6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2731018066406	3	447.252258	1338.73495	-1.2922	-0.00057793	-3.9149	-0.0017509	-5.207	-0.0023289	447.2501268594212	107	0.54292	107.14	106.77	107.32	0.13866					15	13	2	0	0	0	0.37624	1	11479	11479		29.17	12.64	1	110230			46788	4582	31456	31469	52810	52810					0.07912787896134432
RAHLLPLLPHL	11	Unmodified	_RAHLLPLLPHL_					0	0	0		ENST00000520539.5_1_8:103424846-103424885:-|nuORF	ENST00000520539.5_1_8:103424846-103424885:-|nuORF	ENST00000520539.5_1_8:103424846-103424885:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.27154541015625	3	427.27143	1278.79246	0.59953	0.00025616	-0.4195	-0.00017924	0.18003	7.6921E-05	427.2712325235539	37.091	1.1654	37.404	36.962	38.127	0.31312					94	28	5	0	0	0	0.732	1	2943	2943		26.063	4.283	1	3902400			46789	13159	31457	31470	52811	52811					0.16421630101694973
RAHLPAFIR	9	Unmodified	_RAHLPAFIR_					0	0	0		ENST00000453597.7_1_9:34998003-34998117:+|nuORF	ENST00000453597.7_1_9:34998003-34998117:+|nuORF	ENST00000453597.7_1_9:34998003-34998117:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.4907836914062	2	540.824892	1079.63523	0.58695	0.00031744	-1.3274	-0.0007179	-0.74046	-0.00040046	540.8239609678685	33.21	1.2641	33.421	32.636	33.901	0.21168					46	29	3	0	0	0	0.20789	1	2379	2379		15.642	0	1	1137300			46790	11934	31458	31471	52812	52812					0.09859970282150243
RAIDFSPYL	9	Unmodified	_RAIDFSPYL_					0	0	0		nc|ENSG00000172216|P17676-2|CEBPB;ENSG00000172216|ENST00000303004|CEBPB	nc|ENSG00000172216|P17676-2|CEBPB	nc|ENSG00000172216|P17676-2|CEBPB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.2877807617188	2	541.287474	1080.5604	-0.80121	-0.00043369	1.2657	0.00068511	0.46449	0.00025142	541.2879299434815	70.479	0.87196	70.864	70.506	71.378	0.38416					58	20	4	0	0	0	0.44421	2	7815	7815;7827		54.776	5.3348	1	870440			46791	6753	31459	31472	52813;52814	52813					0.023337429602634074
RAIGSQFTIQ	10	Unmodified	_RAIGSQFTIQ_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8051147460938	2	560.809105	1119.60366	0.54768	0.00030714	-0.38928	-0.00021831	0.1584	8.883E-05	560.8087603082379	31.413	0.94127	31.505	31.19	32.131	0.092003					46	21	4	0	0	0	0.23822	1	2128	2128		79.713	5.4575	1	1176700	+		46792	20437;29946;29947	31460	31473	52815	52815					0.04863932737566756
RAIKLVVA	8	Unmodified	_RAIKLVVA_					0	0	0			REV__nc|ENSG00000162729|Q969P0-3|IGSF8	REV__nc|ENSG00000162729|Q969P0-3|IGSF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2998352050781	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82464	1	8266	8266		21.702	0	1	5485100	+		46793	20841	31461	31474	52816	52816					0.14627262273370434
RAIKRGTA	8	Unmodified	_RAIKRGTA_					0	0	0			REV__ENSG00000237441|ENST00000497454|RGL2	REV__ENSG00000237441|ENST00000497454|RGL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7745666503906	2	436.774868	871.535184	0.068775	3.0039E-05	-2.5353	-0.0011074	-2.4666	-0.0010773	436.77361932227035	26.594	0.6912	26.703	26.441	27.132	0.10901					65	32	3	0	0	0	0.81567	1	1008	1008		14.865	2.658	1	226120	+		46794	23797	31462	31475	52817	52817					0.09427732948370249
RAIMAIVV	8	Unmodified	_RAIMAIVV_					0	0	0		ENSG00000146205|ENST00000674324|ANO7;nc|ENSG00000146205|Q6IWH7|ANO7;nc|ENSG00000146205|Q6IWH7-3|ANO7	ENSG00000146205|ENST00000674324|ANO7	ENSG00000146205|ENST00000674324|ANO7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.774169921875	2	436.772948	871.531344	-0.35355	-0.00015442	1.7456	0.00076241	1.392	0.00060799	436.77386062542524	26.841	0.59137	26.803	26.483	27.075	-0.038525					26	14	2	0	0	0	0.86791	1	1243	1243		28.254	6.5519	1	55158			46795	4825	31463	31476	52818	52818					0.0904392713028983
RAIWLVPQ	8	Unmodified	_RAIWLVPQ_					0	0	0		ENST00000368043.7_1_1:160709068-160718007:+|nuORF	ENST00000368043.7_1_1:160709068-160718007:+|nuORF	ENST00000368043.7_1_1:160709068-160718007:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958984375	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.203	1	59.203	58.703	59.703	0								0	0	0	0.29264	1	5146	5146		29.15	2.4566	1				46796	10578	31464	31477	52819	52819					0.08446074267988024
RAIYLRRE	8	Unmodified	_RAIYLRRE_					0	0	0		ENST00000539627.5_1_19:41888855-41888924:+|nuORF	ENST00000539627.5_1_19:41888855-41888924:+|nuORF	ENST00000539627.5_1_19:41888855-41888924:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8199462890625	2	538.819807	1075.62506	1.5057	0.00081131	-2.7126	-0.0014616	-1.2069	-0.0006503	538.818215058259	24.677	0.66485	24.164	23.88	24.544	-0.51365					32	14	3	0	0	0	0.93293	1	1204	1204		51.335	0	1	413780			46797	13478	31465	31478	52820	52820					0.09027362556957996
RAKEERAKRRA	11	Unmodified	_RAKEERAKRRA_					0	0	0			REV__nc|ENSG00000141577|Q9UPN4-3|CEP131	REV__nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7929382324219	3	457.607764	1369.80146	-1.5611	-0.00071437	3.4971	0.0016003	1.936	0.00088592	457.6092234863508	38.256	0.63685	38.267	38.036	38.673	0.011177					30	14	3	0	0	0	0.17334	1	2658	2658		27.644	19.61	1	69370	+		46798	19701	31466	31479	52821	52821					0.13135371720068179
RAKELLGQGLL	11	Unmodified	_RAKELLGQGLL_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3816528320312	2	599.36933	1196.72411	-1.2028	-0.00072094	-0.35466	-0.00021257	-1.5575	-0.00093352	599.3692208772595	40.198	0.42279	40.566	40.313	40.736	0.36797					22	10	3	0	0	0	0.17551	1	3416	3416		30.318	0	1	540880			46799	7581	31467	31480	52822	52822					0.13361340731194105
RAKEQIESL	9	Unmodified	_RAKEQIESL_					0	0	0		ENST00000324309.8_1_4:24833126-24981729:-|nuORF;nc|ENSG00000181982|Q6ZUS6-2|CCDC149;nc|ENSG00000181982|Q6ZUS6-6|CCDC149;nc|ENSG00000181982|Q6ZUS6|CCDC149;nc|ENSG00000181982|Q6ZUS6-5|CCDC149;nc|ENSG00000181982|Q6ZUS6-4|CCDC149;ENSG00000181982|ENST00000635206|CCDC149	ENST00000324309.8_1_4:24833126-24981729:-|nuORF	ENST00000324309.8_1_4:24833126-24981729:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.3001708984375	2	537.301113	1072.58767	0.35186	0.00018905	-0.4096	-0.00022008	-0.057736	-3.1022E-05	537.3007589479149	50.199	0.83301	50.202	49.855	50.688	0.0035973					51	18	4	0	0	0	0.051853	1	4249	4249		107.01	13.864	1	980940			46800	10057	31468	31481	52823	52823					0.05428226500657729
RAKIPGLL	8	Unmodified	_RAKIPGLL_					0	0	0		nc|ENSG00000090534|P40225-3|THPO;nc|ENSG00000090534|P40225-2|THPO;ENSG00000090534|ENST00000647395|THPO	nc|ENSG00000090534|P40225-3|THPO	nc|ENSG00000090534|P40225-3|THPO	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2513427734375	2	434.292362	866.570172	1.696	0.00073656	-1.4267	-0.00061962	0.26927	0.00011694	434.2916118196403	79.972	1.115	80.026	79.571	80.686	0.053841					64	37	2	0	0	0	0.4196	1	7897	7897		13.775	0.81615	1	283570			46801	1648	31469	31482	52824	52824					0.13154975756322074
RAKLDKLSD	9	Unmodified	_RAKLDKLSD_					0	0	0			REV__nc|ENSG00000035403|P18206-2|VCL	REV__nc|ENSG00000035403|P18206-2|VCL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3037719726562	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.7932	1	10833	10833		20.947	0	1	11944000	+		46802	16286	31470	31483	52825	52825					0.07224530363282611
RAKLLPIWC	9	Unmodified	_RAKLLPIWC_					0	0	0			REV__ENSG00000132740|ENST00000255078|IGHMBP2	REV__ENSG00000132740|ENST00000255078|IGHMBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.3270263671875	2	550.325879	1098.63721	1.2755	0.00070194	1.0798	0.00059423	2.3553	0.0012962	550.3264981095151	100.02	1.2719	100.07	99.504	100.78	0.047523					72	28	3	0	0	0	0.7932	1	10747	10747		24.203	2.517	1	456100	+		46803	19025	31471	31484	52826	52826					0.09183262975761863
RAKLLVVA	8	Unmodified	_RAKLLVVA_					0	0	0			REV__nc|ENSG00000144369|Q6P995-2|FAM171B	REV__nc|ENSG00000144369|Q6P995-2|FAM171B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001708984375	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81548	1	8329	8329		20.482	0	1	6323600	+		46804	19885	31472	31485	52827	52827					0.14627262273359065
RAKLTYLLLF	10	Unmodified	_RAKLTYLLLF_					0	0	0			REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|146|3|anti-sense	REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|146|3|anti-sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.76654052734375	3	413.26042	1236.75943	-0.81909	-0.0003385	2.2786	0.00094167	1.4596	0.00060318	413.5958106445827	46.289	0.40644	47.212	46.988	47.395	0.92315					11	9	2	0	0	0	0.37624	1	4358	4358		29.17	9.9074	1	197990	+		46805	29433	31473	31486	52828	52828					0.15052003258961122
RAKLVAIV	8	Unmodified	_RAKLVAIV_					0	0	0			REV__ENSG00000154237|ENST00000388948|LRRK1	REV__ENSG00000154237|ENST00000388948|LRRK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3002014160156	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.86294	1	7873	7873		8.8223	0	1	6323600	+		46806	20374	31474	31487	52829	52829					0.14627262273347696
RAKPSDYLLK	10	Unmodified	_RAKPSDYLLK_					0	0	0			REV__ENSG00000114738|ENST00000621469|MAPKAPK3	REV__ENSG00000114738|ENST00000621469|MAPKAPK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	595.8487548828125	2	595.84823	1189.68191	0.15157	9.0313E-05	0.012622	7.5209E-06	0.16419	9.7834E-05	595.848252333103	17.273	0.41158	16.662	16.475	16.886	-0.6107					17	8	4	0	0	0	0.21391	1	239	239		82.75	15.257	1	173670	+		46807	18060	31475	31488	52830	52830					0.09465365322785146
RAKQVQPLVL	10	Unmodified	_RAKQVQPLVL_					0	0	0		ENSG00000127511|ENST00000248054|SIN3B;nc|ENSG00000127511|O75182|SIN3B	ENSG00000127511|ENST00000248054|SIN3B	ENSG00000127511|ENST00000248054|SIN3B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	576.2412109375	2	576.36659	1150.71863	-0.99137	-0.0005714	3.9781	0.0022929	2.9868	0.0017215	576.3686551323491	70.794	0.10385	70.828	70.781	70.885	0.034004					5	4	2	0	0	0	0.37624	1	6699	6699		14.865	0	1	91223			46808	3502	31476	31489	52831	52831					0.14929661939368088
RAKRRVRLR	9	Unmodified	_RAKRRVRLR_					0	0	0			REV__ENST00000466059.5_1_3:112989541-112990141:+|nuORF	REV__ENST00000466059.5_1_3:112989541-112990141:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.27288818359375	3	404.274168	1209.80067	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.524	1	22.524	22.024	23.024	0								0	0	0	0.33394	1	671	671		19.104	3.7704	1		+		46809	27118	31477	31490	52832	52832					0.2041662186168196
RAKSALQLG	9	Unmodified	_RAKSALQLG_					0	0	0			REV__chr17:44040256-44052634|18|17.94|0.29|5.97|-|0|TE_info:AluSq2,AluSq2_dup51882,Alu,SINE,donor,+,44052634,44052767|LSM12,None|2	REV__chr17:44040256-44052634|18|17.94|0.29|5.97|-|0|TE_info:AluSq2,AluSq2_dup51882,Alu,SINE,donor,+,44052634,44052767|LSM12,None|2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28826904296875	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.41	1	114.47	113.97	114.97	0.061073								0	0	0	0.34348	1	12229	12229		16.473	2.6978	1		+		46810	15655	31478	31491	52833	52833					0.0874858239999412
RAKTIKNTVC	10	Unmodified	_RAKTIKNTVC_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3298950195312	2	567.326608	1132.63866	1.492	0.00084643	4.4012	0.0024969	5.8932	0.0033434	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.86763	1	9302	9302		26.693	1.1189	1	5346500			46811	6612	31479	31492	52834	52834					0.07764852273862743
RAKVLIAV	8	Unmodified	_RAKVLIAV_					0	0	0		ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	ENSG00000112218|ENST00000229955|GPR63	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3001708984375	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.80706	1	7621	7621		19.36	0	1	5485100			46812	2641	31480	31493	52835	52835					0.14627262273359065
RAKVPGETAS	10	Unmodified	_RAKVPGETAS_					0	0	0			REV__ENST00000570036.5_1_16:84513521-84531159:-|nuORF	REV__ENST00000570036.5_1_16:84513521-84531159:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2799377441406	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.80179	1	9221	9221		39.253	4.1008	1	1903500	+		46813	19650	31481	31494	52836	52836					0.039116708121468946
RALAKPAV	8	Unmodified	_RALAKPAV_					0	0	0		ENSG00000150990|ENST00000308736|DHX37	ENSG00000150990|ENST00000308736|DHX37	ENSG00000150990|ENST00000308736|DHX37	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26678466796875	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.81548	1	2386	2386		20.482	0	1	268720			46814	5086	31482	31495	52837	52837					0.10394116205179671
RALAQFIL	8	Unmodified	_RALAQFIL_					0	0	0		ENST00000588022.1_1_17:33786947-33787550:-|nuORF	ENST00000588022.1_1_17:33786947-33787550:-|nuORF	ENST00000588022.1_1_17:33786947-33787550:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.289794921875	2	466.28982	930.565087	-0.42617	-0.00019872	0.52169	0.00024326	0.095514	4.4537E-05	466.2898922448067	74.098	1.2536	74.054	73.807	75.061	-0.043877					90	43	4	0	0	0	0.93529	1	7237	7237		52.299	4.3836	1	967050			46815	14204	31483	31496	52838	52838					0.09702671893705883
RALASTSRAPP	11	Unmodified	_RALASTSRAPP_					0	0	0		ENST00000561241.1_1_15:63340374-63341172:-|nuORF	ENST00000561241.1_1_15:63340374-63341172:-|nuORF	ENST00000561241.1_1_15:63340374-63341172:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.8168334960938	2	563.820004	1125.62546	-1.2239	-0.00069008	-4.0885	-0.0023052	-5.3124	-0.0029952	563.8176885194346	53.777	0.95777	53.771	53.358	54.315	-0.0053711					44	26	3	0	0	0	0.67778	1	4731	4731		35.152	2.4015	1	93872			46816	13831	31484	31497	52839	52839					0.0676673748612302
RALAVVKL	8	Unmodified	_RALAVVKL_					0	0	0			REV__ENSG00000180694|ENST00000458549|TMEM64	REV__ENSG00000180694|ENST00000458549|TMEM64	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3002624511719	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81548	1	8341	8341		20.482	0	1	6323600	+		46817	22410	31485	31498	52840	52840					0.14627262273359065
RALDKTKH	8	Unmodified	_RALDKTKH_					0	0	0			REV__ENSG00000188897|ENST00000696174|unknown	REV__ENSG00000188897|ENST00000696174|unknown	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.7875671386719	2	484.785433	967.556313	-1.1421	-0.00055367	1.9636	0.00095194	0.82152	0.00039826	484.78789018167805	41.476	1.8948	41.435	40.856	42.751	-0.04081					148	48	4	0	0	0	0.88601	1	3135	3135		34.173	0	1	1666200	+		46818	23042	31486	31499	52841	52841					0.07123698257225897
RALESKGKPPS	11	Unmodified	_RALESKGKPPS_					0	0	0		ENST00000519685.5_1_8:22874978-22875368:+|nuORF	ENST00000519685.5_1_8:22874978-22875368:+|nuORF	ENST00000519685.5_1_8:22874978-22875368:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.3115234375	2	585.335487	1168.65642	0.36587	0.00021415	3.5126	0.002056	3.8784	0.0022702	585.3374990807561	49.471	0.93906	50.316	49.869	50.809	0.84501					40	22	3	0	0	0	0.17368	1	4775	4775		28.577	0.49524	1	762090			46819	13142	31487	31500	52842	52842					0.07883890800394511
RALETRSAL	9	Unmodified	_RALETRSAL_					0	0	0		nc|ENSG00000120256|Q86VZ4-2|LRP11	nc|ENSG00000120256|Q86VZ4-2|LRP11	nc|ENSG00000120256|Q86VZ4-2|LRP11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.8077392578125	2	508.795998	1015.57744	-0.055623	-2.8301E-05	-0.79096	-0.00040244	-0.84658	-0.00043074	508.79627319077696	83.291	0.12709	83.358	83.253	83.38	0.066719					4	2	2	0	0	0	0.20789	1	8272	8272		15.642	0	1	23803			46820	14874	31488	31501	52843	52843					0.07027663566088904
RALFPGAH	8	Unmodified	_RALFPGAH_					0	0	0		nc|ENSG00000154025|A0PJK1-4|SLC5A10;nc|ENSG00000154025|A0PJK1-3|SLC5A10	nc|ENSG00000154025|A0PJK1-4|SLC5A10	nc|ENSG00000154025|A0PJK1-4|SLC5A10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801208496094	2	434.743037	867.471521	-0.96794	-0.00042081	3.4211	0.0014873	2.4532	0.0010665	434.7432223271131	36.985	0.39875	36.932	36.739	37.137	-0.053558					10	8	2	0	0	0	0.4196	1	2476	2476		37.028	16.547	1	26591			46821	15001	31489	31502	52844	52844					0.0324837251127974
RALGLASH	8	Unmodified	_RALGLASH_					0	0	0			REV__ENST00000593209.5_2_17:40340836-40341070:-|nuORF	REV__ENST00000593209.5_2_17:40340836-40341070:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1836853027344	2	412.740494	823.466435	2.4521	0.0010121	0.65949	0.0002722	3.1116	0.0012843	412.74058648387654	101.82	0.234	102.09	101.96	102.19	0.26322					7	5	2	0	0	0	0.4196	1	12350	12350		25.45	4.9683	1	58663	+		46822	29225	31490	31503	52845	52845					0.047640686486602135
RALGLLPQ	8	Unmodified	_RALGLLPQ_					0	0	0			REV__ENST00000553678.1_1_14:85995020-85995465:+|nuORF	REV__ENST00000553678.1_1_14:85995020-85995465:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2518310546875	2	434.27417	866.533787	1.7466	0.0007585	3.6604	0.0015896	5.407	0.0023481	434.2740775224735	94.145	1.3377	94.086	92.89	94.228	-0.059212					42	31	2	0	0	0	0.4196	1	9854	9854		12.207	8.2216	1	68415	+		46823	28652	31491	31504	52846	52846					0.09518098859598467
RALGPRSSD	9	Unmodified	_RALGPRSSD_					0	0	0		ENST00000537318.5_1_11:61547758-61548478:+|nuORF;ENST00000265460.9_1_11:61547758-61548478:+|nuORF	ENST00000537318.5_1_11:61547758-61548478:+|nuORF	ENST00000537318.5_1_11:61547758-61548478:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27740478515625	2	479.756872	957.499192	-1.1039	-0.00052963	1.6863	0.00080903	0.58239	0.00027941	479.7575853383176	83.912	0.77727	83.912	83.442	84.219	0					27	19	2	0	0	0	0.20789	1	7912	7912		42.396	19.354	1	49867			46824	9506	31492	31505	52847	52847					0.01874230980865832
RALGPWAS	8	Unmodified	_RALGPWAS_					0	0	0		ENST00000267202.6_1_12:123351539-123351611:-|nuORF	ENST00000267202.6_1_12:123351539-123351611:-|nuORF	ENST00000267202.6_1_12:123351539-123351611:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.2357482910156	2	429.235045	856.455536	-1.7002	-0.00072977	3.2929	0.0014134	1.5927	0.00068365	429.23632496484737	63.188	2.3667	63.302	62.678	65.045	0.11389					282	104	4	0	0	0	0.87922	1	5565	5565		31.955	5.1588	1	6358600			46825	9528	31493	31506	52848	52848					0.02156666274379404
RALGPWAS	8	Unmodified	_RALGPWAS_					0	0	0		ENST00000267202.6_1_12:123351539-123351611:-|nuORF	ENST00000267202.6_1_12:123351539-123351611:-|nuORF	ENST00000267202.6_1_12:123351539-123351611:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.23583984375	2	429.235045	856.455536	-0.96904	-0.00041595	2.5449	0.0010923	1.5758	0.0006764	429.23600225893705	63.259	2.2189	63.282	62.72	64.938	0.022984					256	90	4	0	0	0	0.87922	2	5547	5540;5547		47.916	12.715	1	5703300			46826	9528	31493	31506	52849;52850	52850					0.02156666274379404
RALHIRKLL	9	Unmodified	_RALHIRKLL_					0	0	0		nc|ENSG00000196935|Q7Z6B7-2|SRGAP1;ENSG00000196935|ENST00000355086|SRGAP1	nc|ENSG00000196935|Q7Z6B7-2|SRGAP1	nc|ENSG00000196935|Q7Z6B7-2|SRGAP1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3402099609375	2	560.377292	1118.74003	-0.40792	-0.00022859	-3.8163	-0.0021385	-4.2242	-0.0023671	560.374426453582	102.69	0.67233	102.69	102.28	102.96	0					26	16	2	0	0	0	0.20789	1	10496	10496		11.511	3.8207	1	231800			46827	8116	31494	31507	52851	52851					0.18541091758743278
RALILVSDL	9	Unmodified	_RALILVSDL_					0	0	0		ENSG00000213023|ENST00000600079|SYT3	ENSG00000213023|ENST00000600079|SYT3	ENSG00000213023|ENST00000600079|SYT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.3116149902344	2	500.313492	998.612431	0.60375	0.00030207	-0.30238	-0.00015128	0.30138	0.00015078	500.3130487867207	78.718	0.69824	78.857	78.489	79.187	0.13883					40	18	3	0	0	0	0.69624	1	7416	7416		40.778	7.2626	1	179210			46828	8575	31495	31508	52852	52852					0.11306906374034043
RALKLIRFIRM	11	Unmodified	_RALKLIRFIRM_					0	0	0			REV__ENSG00000156486|ENST00000287042|KCNS2;REV__ENSG00000168263|ENST00000382082|KCNV2;REV__ENSG00000170745|ENST00000304101|KCNS3	REV__ENSG00000156486|ENST00000287042|KCNS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.9710998535156	3	472.970986	1415.89113	-0.95095	-0.00044977	0.88645	0.00041927	-0.064501	-3.0507E-05	472.971385713144	49.546	3.8081	49.55	48.972	52.78	0.0035973					232	95	4	0	0	0	0.79224	1	4312	4312		12.957	0.52465	1	1400600	+		46829	20491;21473;21683	31496	31509	52853	52853					0.1998191007510286
RALKLIRFIRM	11	Unmodified	_RALKLIRFIRM_					0	0	0			REV__ENSG00000156486|ENST00000287042|KCNS2;REV__ENSG00000168263|ENST00000382082|KCNV2;REV__ENSG00000170745|ENST00000304101|KCNS3	REV__ENSG00000156486|ENST00000287042|KCNS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.3051452636719	3	472.970986	1415.89113	-1.5017	-0.00071026	1.2351	0.00058416	-0.26661	-0.0001261	472.97146844681254	45.906	1.1209	46.801	46.327	47.448	0.89542					102	27	5	0	0	0	0.77511	1	4291	4291		16.53	2.4438	1	9488500	+		46830	20491;21473;21683	31496	31509	52854	52854					0.1998191007510286
RALLASWAT	9	Unmodified	_RALLASWAT_					0	0	0		nc|ENSG00000064300|P08138-2|NGFR;ENSG00000064300|ENST00000172229|NGFR	nc|ENSG00000064300|P08138-2|NGFR	nc|ENSG00000064300|P08138-2|NGFR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.78076171875	2	494.782359	987.550165	-1.0197	-0.00050453	-3.2191	-0.0015927	-4.2388	-0.0020973	494.78063343938777	84.197	2.1372	84.197	83.134	85.271	0					93	51	2	0	0	0	0.78983	1	7866	7866		27.882	2.3082	1	184680			46831	1100	31497	31510	52855	52855					0.05589180025708629
RALLFLSYILT	11	Unmodified	_RALLFLSYILT_					0	0	0		ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2676086425781	3	437.267463	1308.78056	1.089	0.00047619	-0.35859	-0.0001568	0.73042	0.00031939	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.7896	1	4729	4729		13.508	0.55046	1	2745300			46832	3698	31498	31511	52856	52856					0.13851968567837503
RALLLAGP	8	Unmodified	_RALLLAGP_					0	0	0		ENST00000553883.1_1_14:94401004-94406176:-|nuORF	ENST00000553883.1_1_14:94401004-94406176:-|nuORF	ENST00000553883.1_1_14:94401004-94406176:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5636901855469	2	405.763438	809.512323	0.3976	0.00016133	-1.4018	-0.0005688	-1.0042	-0.00040747	405.76275052337263	63.468	0.068245	63.59	63.556	63.625	0.12252					4	2	2	0	0	0	0.4196	1	5565	5565		9.4706	8.3751	1	26416			46833	13709	31499	31512	52857	52857					0.09994713830894852
RALLLHLPAFG	11	Unmodified	_RALLLHLPAFG_					0	0	0		ENSG00000140470|ENST00000268070|ADAMTS17	ENSG00000140470|ENST00000268070|ADAMTS17	ENSG00000140470|ENST00000268070|ADAMTS17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3649291992188	2	604.369133	1206.72371	-1.2751	-0.00077064	-2.39	-0.0014444	-3.6651	-0.0022151	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.77937	1	12873	12873		15.642	1.5047	1	3346600			46834	4434	31500	31513	52858	52858					0.12861965801971564
RALLRAGVRGG	11	Unmodified	_RALLRAGVRGG_					0	0	0		ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.7974853515625	2	563.351806	1124.68906	0.92119	0.00051895	-2.4067	-0.0013558	-1.4855	-0.00083685	563.350578093856	95.709	1.0181	96.129	95.704	96.723	0.41964					40	24	3	0	0	0	0.17387	1	11476	11476		30.318	10.321	1	222350			46835	8876	31501	31514	52859	52859					0.13170142713875066
RALLRAGVRGG	11	Unmodified	_RALLRAGVRGG_					0	0	0		ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	563.351806	1124.68906	0.42939	0.0002419	-1.929	-0.0010867	-1.4996	-0.00084482	563.350538146682	95.641	0.8831	95.872	95.469	96.352	0.23103	-0.077226	-0.0010699	NaN	22.58	36	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199700			46836	8876	31501	31514							0.13170142713875066
RALLRAGVRGG	11	Unmodified	_RALLRAGVRGG_					0	0	0		ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	563.351806	1124.68906	0.81917	0.00046148	-2.4029	-0.0013537	-1.5838	-0.00089222	563.3501700674734	95.682	0.97008	95.845	95.433	96.403	0.16316	-0.10334	-0.0016038	NaN	22.58	40	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185280			46837	8876	31501	31514							0.13170142713875066
RALLRAGVRGG	11	Unmodified	_RALLRAGVRGG_					0	0	0		ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	563.351806	1124.68906	-1.4088	-0.00079363	-0.23487	-0.00013232	-1.6436	-0.00092595	563.3514337784594	95.697	1.104	95.899	95.557	96.661	0.20242	-0.049593	0.00083894	NaN	22.58	41	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188060			46838	8876	31501	31514							0.13170142713875066
RALLRLLALG	10	Unmodified	_RALLRLLALG_					0	0	0		ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6;nc|ENSG00000124587|Q13608-2|PEX6	ENSG00000124587|ENST00000304611|PEX6	ENSG00000124587|ENST00000304611|PEX6	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.3741455078125	2	548.371675	1094.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.8	1	36.739	36.239	37.239	-0.060333								0	0	0	0.45132	1	2052	2052		20.947	3.582	1				46839	3346	31502	31515	52860	52860					0.18522269664572377
RALMIVGI	8	Unmodified	_RALMIVGI_					0	0	0		nc|ENSG00000066405|P56856-2|CLDN18;ENSG00000066405|ENST00000183605|CLDN18	nc|ENSG00000066405|P56856-2|CLDN18	nc|ENSG00000066405|P56856-2|CLDN18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.7734375	2	436.772948	871.531344	0.36031	0.00015737	1.5614	0.00068196	1.9217	0.00083933	436.77349327524536	26.738	0.89724	26.766	26.451	27.349	0.028172					66	41	2	0	0	0	0.86294	1	1026	1026		8.8223	0	1	200440			46840	14766	31503	31516	52861	52861					0.09043927130312568
RALPAGRRRR	10	Unmodified	_RALPAGRRRR_					0	0	0		ENST00000282146.4_1_14:90528455-90650665:+|nuORF	ENST00000282146.4_1_14:90528455-90650665:+|nuORF	ENST00000282146.4_1_14:90528455-90650665:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5904541015625	3	403.590156	1207.74864	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.146	1	16.206	15.706	16.706	0.059269								0	0	0	0.45132	1	114	114		19.263	0	1				46841	9632	31504	31517	52862	52862					0.1530745844793273
RALPWAVTL	9	Unmodified	_RALPWAVTL_					0	0	0			REV__ENSG00000166341|ENST00000299441|DCHS1	REV__ENSG00000166341|ENST00000299441|DCHS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.80908203125	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.78536	1	3944	3944		29.15	0	1	1550000	+		46842	21281	31505	31518	52863	52863					0.09042343439477918
RALQVFFCII	10	Unmodified	_RALQVFFCII_					0	0	0			REV__ENST00000482846.1_1_15:63447754-63448774:-|nuORF	REV__ENST00000482846.1_1_15:63447754-63448774:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8589477539062	2	605.344269	1208.67399	0.14892	9.0149E-05	-3.0519	-0.0018474	-2.9029	-0.0017573	605.3422001771712	83.11	0.45029	83.565	83.317	83.767	0.45556					17	10	2	0	0	0	0.37624	1	9667	9667		51.335	9.9088	1	161130	+		46843	27475	31506	31519	52864	52864					0.07799514801672558
RALRFAAA	8	Unmodified	_RALRFAAA_					0	0	0			REV__ENSG00000262814|ENST00000333676|MRPL12	REV__ENSG00000262814|ENST00000333676|MRPL12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77178955078125	2	438.264136	874.51372	-1.1179	-0.00048992	-1.4421	-0.00063201	-2.5599	-0.0011219	438.2635111536389	40.018	1.1582	40.607	39.563	40.721	0.58915					43	26	4	0	0	0	0.4196	1	3364	3364		8.2313	0	1	2279700	+		46844	23950	31507	31520	52865	52865					0.07144347919643224
RALRLVWH	8	Unmodified	_RALRLVWH_					0	0	0			REV__ENST00000474436.1_1_9:35096124-35096232:-|nuORF	REV__ENST00000474436.1_1_9:35096124-35096232:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.75927734375	2	525.81961	1049.62467	0.27122	0.00014261	-3.2648	-0.0017167	-2.9936	-0.0015741	525.8168479172153	82.987	0.28338	83.461	83.335	83.619	0.47383					9	6	2	0	0	0	0.4196	1	9666	9666		35.201	10.998	1	89043	+		46845	27301	31508	31521	52866	52866					0.10183987627738134
RALRNVWQWLL	11	Unmodified	_RALRNVWQWLL_					0	0	0		nc|ENSG00000163354|Q5T1A1-2|DCST2;ENSG00000163354|ENST00000368424|DCST2	nc|ENSG00000163354|Q5T1A1-2|DCST2	nc|ENSG00000163354|Q5T1A1-2|DCST2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2857971191406	3	485.617489	1453.83064	0.40422	0.0001963	-2.6547	-0.0012892	-2.2505	-0.0010929	485.61623019479447	57.927	1.1347	58.037	57.739	58.874	0.11027					78	53	2	0	0	0	0.17863	1	4945	4945		25.126	6.5949	1	353490			46846	5786	31509	31522	52867	52867					0.12187516016365407
RALRPGLRVR	10	Unmodified	_RALRPGLRVR_					0	0	0		ENST00000444040.6_1_3:72897384-72897555:-|nuORF	ENST00000444040.6_1_3:72897384-72897555:-|nuORF	ENST00000444040.6_1_3:72897384-72897555:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3931884765625	2	597.388722	1192.76289	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.68	1	115.66	115.16	116.16	-0.016441								0	0	0	0.45132	1	13907	13907		10.265	0.5596	1				46847	11810	31510	31523	52868	52868					0.17422110876213992
RALRPLGKVSL	11	Unmodified	_RALRPLGKVSL_					0	0	0			REV__nc|ENSG00000074855|Q9HCE9-2|ANO8	REV__nc|ENSG00000074855|Q9HCE9-2|ANO8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92962646484375	3	403.931185	1208.77173	-1.067	-0.00043099	-3.6376	-0.0014693	-4.7046	-0.0019003	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.73893	1	4195	4195		27.644	11.114	1	5907700	+		46848	16697	31511	31524	52869	52869					0.1756903972204782
RALRSLTAS	9	Unmodified	_RALRSLTAS_					0	0	0		ENST00000473391.1_1_7:150067121-150067265:+|nuORF	ENST00000473391.1_1_7:150067121-150067265:+|nuORF	ENST00000473391.1_1_7:150067121-150067265:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7906188964844	2	487.790715	973.566878	-1.3135	-0.00064074	1.1066	0.00053979	-0.20694	-0.00010094	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.76764	1	8441	8441		34.173	2.6427	1	2239000			46849	12279	31512	31525	52870	52870					0.07903680911658739
RALRTGAGR	9	Unmodified	_RALRTGAGR_					0	0	0			REV__ENST00000381939.1_1_20:814482-825421:+|nuORF	REV__ENST00000381939.1_1_20:814482-825421:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2882995605469	2	479.288674	956.562795	1.1411	0.00054692	-1.0598	-0.00050794	0.081317	3.8974E-05	479.28802767290887	16.959	0.34087	16.472	16.326	16.667	-0.48718					17	7	3	0	0	0	0.51307	1	209	209		51.335	5.3835	1	564860	+		46850	25971	31513	31526	52871	52871					0.08277636208606509
RALSAAKAPK	10	Unmodified	_RALSAAKAPK_					0	0	0			REV__nc|ENSG00000130363|Q86UC2|RSPH3	REV__nc|ENSG00000130363|Q86UC2|RSPH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.3194580078125	2	506.816733	1011.61891	-0.90619	-0.00045927	3.564	0.0018063	2.6578	0.001347	506.81836669409296	60.86	0.69365	61.25	60.9	61.593	0.38945					52	22	3	0	0	0	0.76096	1	6458	6458		41.427	0	1	2316000	+		46851	29838	31514	31527	52872	52872					0.11356844325405291
RALSATVR	8	Unmodified	_RALSATVR_					0	0	0			REV__ENST00000507689.1_3_17:48277445-48277520:-|nuORF	REV__ENST00000507689.1_3_17:48277445-48277520:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2650451660156	2	437.266876	872.519199	-0.36504	-0.00015962	-2.3712	-0.0010368	-2.7362	-0.0011965	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.87479	1	1069	1069		30.504	2.2494	1	1300600	+		46852	27912	31515	31528	52873	52873					0.0778402671146523
RALSRPSAS	9	Unmodified	_RALSRPSAS_					0	0	0		ENST00000254657.7_1_2:239161823-239162174:-|nuORF	ENST00000254657.7_1_2:239161823-239162174:-|nuORF	ENST00000254657.7_1_2:239161823-239162174:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7674865722656	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.76764	1	8702	8702		34.173	5.023	1	547170			46853	9322	31516	31529	52874	52874					0.04590821360523023
RALTHCLVRIK	11	Unmodified	_RALTHCLVRIK_					0	0	0			REV__nc|ENSG00000146856|Q8NEM8-2|AGBL3	REV__nc|ENSG00000146856|Q8NEM8-2|AGBL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2677001953125	3	437.267691	1308.78124	0.29718	0.00012995	0.15623	6.8312E-05	0.4534	0.00019826	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.74771	1	4179	4179		22.562	4.7284	1	4533800	+		46854	20037	31517	31530	52875	52875					0.13920484735899663
RALTHCLVRIK	11	Unmodified	_RALTHCLVRIK_					0	0	0			REV__nc|ENSG00000146856|Q8NEM8-2|AGBL3	REV__nc|ENSG00000146856|Q8NEM8-2|AGBL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2679748535156	3	437.267691	1308.78124	-0.34848	-0.00015238	0.5887	0.00025742	0.24022	0.00010504	437.26783788235974	49.466	1.602	49.926	49.459	51.061	0.45983					122	38	5	0	0	0	0.77511	1	4824	4824		16.53	0	1	4698000	+		46855	20037	31517	31530	52876	52876					0.13920484735899663
RALWNPLL	8	Unmodified	_RALWNPLL_					0	0	0			REV__ENST00000324460.6_1_9:128003401-128003485:-|nuORF	REV__ENST00000324460.6_1_9:128003401-128003485:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7955627441406	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.86288	1	3954	3954		26.796	1.3459	1	1232600	+		46856	25050	31518	31531	52877	52877					0.08446074267999393
RAMELKDGQ	9	Unmodified	_RAMELKDGQ_					0	0	0			REV__nc|ENSG00000136811|Q5BJF6-2|ODF2	REV__nc|ENSG00000136811|Q5BJF6-2|ODF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.76220703125	2	524.266216	1046.51788	-0.94372	-0.00049476	3.0322	0.0015897	2.0884	0.0010949	524.2679559011215	42.548	0.65496	42.982	42.765	43.419	0.4334					30	15	3	0	0	0	0.26953	1	3789	3789		67.494	5.3863	1	1404000	+		46857	19334	31519	31532	52878	52878					-0.0035197543959384348
RAMLRGSRLRK	11	Unmodified	_RAMLRGSRLRK_					0	0	0		ENSG00000161714|ENST00000619929|PLCD3	ENSG00000161714|ENST00000619929|PLCD3	ENSG00000161714|ENST00000619929|PLCD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.608642578125	3	448.61034	1342.80919	0.6314	0.00028325	-3.1348	-0.0014063	-2.5034	-0.0011231	448.60887470875934	77.01	0.99304	77.058	76.682	77.675	0.047981					82	45	2	0	0	0	0.77803	1	7579	7579		15.921	3.4878	1	702210			46858	5653	31520	31533	52879	52879					0.15149807715988572
RAMRSTTL	8	Unmodified	_RAMRSTTL_					0	0	0		nc|ENSG00000182450|Q9NYG8-2|KCNK4	nc|ENSG00000182450|Q9NYG8-2|KCNK4	nc|ENSG00000182450|Q9NYG8-2|KCNK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.258544921875	2	468.258194	934.501834	1.2763	0.00059762	-1.795	-0.0008405	-0.5187	-0.00024289	468.2572045606824	99.029	2.0924	99.391	99.016	101.11	0.36137					103	52	4	0	0	0	0.93786	1	11912	11912		53.351	1.0523	1	3431000			46859	15140	31521	31534	52880	52880					0.031963631141593396
RAMVKKPSLLV	11	Unmodified	_RAMVKKPSLLV_					0	0	0			REV__ENSG00000137501|ENST00000359152|SYTL2	REV__ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3936157226562	2	621.391751	1240.76895	-0.28789	-0.0001789	1.8133	0.0011268	1.5254	0.00094787	621.392781910036	104.72	2.6015	104.71	104.23	106.84	-0.014809					230	61	5	0	0	0	0.72918	1	11449	11449		26.693	5.746	1	11881000	+		46860	19388	31522	31535	52881	52881					0.15819448272850423
RANNRDQTY	9	Unmodified	_RANNRDQTY_					0	0	0			REV__ENSG00000138801|ENST00000265174|PAPSS1	REV__ENSG00000138801|ENST00000265174|PAPSS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.2774658203125	2	569.273418	1136.53228	0.4898	0.00027883	1.9815	0.001128	2.4713	0.0014068	569.2744694870318	58.537	1.2979	58.647	58.343	59.641	0.11027					132	48	4	0	0	0	0.76255	1	5032	5032		35.618	1.4457	1	2907600	+		46861	19509	31523	31536	52882	52882					-0.030521869671019886
RANPMYNA	8	Unmodified	_RANPMYNA_					0	0	0		ENSG00000175206|ENST00000376480|NPPA	ENSG00000175206|ENST00000376480|NPPA	ENSG00000175206|ENST00000376480|NPPA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7229919433594	2	468.721444	935.428335	-0.013184	-6.1798E-06	3.638	0.0017052	3.6249	0.001699	468.7232380662735	77.148	2.5429	77.547	77.268	79.811	0.3997					145	61	5	0	0	0	0.89962	1	8842	8842		38.806	13.232	1	15095000			46862	6997	31524	31537	52883	52883					-0.041961853283282835
RAPAARAR	8	Unmodified	_RAPAARAR_					0	0	0		ENST00000249330.2_1_7:100805946-100806276:-|nuORF	ENST00000249330.2_1_7:100805946-100806276:-|nuORF	ENST00000249330.2_1_7:100805946-100806276:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78009033203125	2	434.764835	867.515117	-0.90827	-0.00039488	1.7579	0.00076425	0.84958	0.00036937	434.7657379706865	36.57	0.17816	36.517	36.426	36.604	-0.053558					5	3	2	0	0	0	0.4196	1	2440	2440		17.365	0	1	15232			46863	9287	31525	31538	52884	52884					0.0760598200839695
RAPAPRSA	8	Unmodified	_RAPAPRSA_					0	0	0			REV__ENST00000317089.9_1_16:47007413-47007584:-|nuORF	REV__ENST00000317089.9_1_16:47007413-47007584:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2368469238281	2	413.238119	824.461684	-0.12335	-5.0972E-05	0.56146	0.00023202	0.43812	0.00018105	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.84341	1	7378	7378		24.203	0	1	1978800	+		46864	24961	31526	31539	52885	52885					0.04243184505889985
RAPEGFEE	8	Unmodified	_RAPEGFEE_					0	0	0		ENST00000464111.1_1_7:100283679-100283991:-|nuORF;ENSG00000146830|ENST00000678049|GIGYF1;chr7:100689555-100693937|53|10.19|0.0|19.96|-|ENST00000646601|GIGYF1,GIGYF1	ENST00000464111.1_1_7:100283679-100283991:-|nuORF	ENST00000464111.1_1_7:100283679-100283991:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.7185974121094	2	467.716882	933.41921	-1.1651	-0.00054494	-1.5881	-0.00074278	-2.7532	-0.0012877	467.71593243095464	72.382	0.63271	72.462	72.095	72.728	0.080032					44	21	3	0	0	0	0.79929	1	6621	6621		18.324	0	1	143690			46865	12082	31527	31540	52886	52886					-0.05016255412999726
RAPGCLEPPL	10	Unmodified	_RAPGCLEPPL_					0	0	0		ENST00000502488.1_1_4:106447966-106448143:-|nuORF	ENST00000502488.1_1_4:106447966-106448143:-|nuORF	ENST00000502488.1_1_4:106447966-106448143:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7816162109375	2	526.781502	1051.54845	-0.40283	-0.0002122	-3.6928	-0.0019453	-4.0956	-0.0021575	526.7793154264734	59.804	1.2618	60.357	59.998	61.26	0.55323					60	33	3	0	0	0	0.74274	1	6400	6400		42.396	5.237	1	1946700			46866	12854	31528	31541	52887	52887					0.024738029454283605
RAPGGRPV	8	Unmodified	_RAPGGRPV_					0	0	0		ENST00000342427.6_1_20:32379363-32379447:+|nuORF	ENST00000342427.6_1_20:32379363-32379447:+|nuORF	ENST00000342427.6_1_20:32379363-32379447:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2183532714844	2	405.240661	808.46677	-0.18721	-7.5864E-05	0.59134	0.00023964	0.40413	0.00016377	405.24086602759013	85.421	1.1197	85.488	85.292	86.411	0.067261					40	25	2	0	0	0	0.4196	1	8641	8641		12.207	0	1	201830			46867	10260	31529	31542	52888	52888					0.05487488368510185
RAPGGSSTDS	10	Unmodified	_RAPGGSSTDS_					0	0	0			REV__ENSG00000058262|ENST00000243253|SEC61A1	REV__ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.716064453125	2	467.71487	933.415188	-1.1651	-0.00054494	2.7123	0.0012686	1.5472	0.00072365	467.71593243095464	72.382	0.63271	72.462	72.095	72.728	0.080032					44	21	3	0	0	0	0.86348	1	6593	6593		31.53	8.4873	1	143690	+		46868	16434	31530	31543	52889	52889					-0.054183449067181755
RAPGHRAF	8	Unmodified	_RAPGHRAF_					0	0	0		ENSG00000105464|ENST00000263269|GRIN2D	ENSG00000105464|ENST00000263269|GRIN2D	ENSG00000105464|ENST00000263269|GRIN2D	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79168701171875	2	456.25156	910.488568	-1.2517	-0.00057109	-3.5577	-0.0016232	-4.8094	-0.0021943	456.2514357747908	40.476	0.94245	40.483	40.114	41.056	0.0065002					65	34	5	0	0	0	0.4196	1	2634	2634		35.201	1.0282	1	155290			46869	2219	31531	31544	52890	52890					0.029742931170858355
RAPGLARA	8	Unmodified	_RAPGLARA_					0	0	0		nc|ENSG00000157833|Q75VX8-3|GAREM2;nc|ENSG00000157833|Q75VX8-2|GAREM2;ENSG00000157833|ENST00000401533|GAREM2	nc|ENSG00000157833|Q75VX8-3|GAREM2	nc|ENSG00000157833|Q75VX8-3|GAREM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2485046386719	2	406.248486	810.48242	3.1442	0.0012773	-3.4094	-0.0013851	-0.26526	-0.00010776	406.24697611805044	112.74	0.52679	112.77	112.38	112.91	0.030602					35	22	2	0	0	0	0.86791	1	13629	13629		28.254	0	1	70745			46870	5450	31532	31545	52891	52891					0.06959774885547176
RAPGLGAAK	9	Unmodified	_RAPGLGAAK_					0	0	0			REV__ENST00000408965.3_1_8:48650723-48651419:-|nuORF	REV__ENST00000408965.3_1_8:48650723-48651419:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.75439453125	2	420.756144	839.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.635	1	21.192	20.692	21.692	-0.44324								0	0	0	0.31117	1	801	801		26.693	3.6504	1		+		46871	26326	31533	31546	52892	52892					0.07156641682740883
RAPIRQKCV	9	Unmodified	_RAPIRQKCV_					0	0	0			REV__ENSG00000168386|ENST00000477258|FILIP1L	REV__ENSG00000168386|ENST00000477258|FILIP1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	535.8162231445312	2	535.81621	1069.61787	3.1559	0.001691	-0.64084	-0.00034337	2.5151	0.0013476	535.8161013513314	99.289	1.4852	99.235	98.78	100.26	-0.053741					66	34	3	0	0	0	0.78058	1	10740	10740		30.504	0	1	505840	+		46872	21482	31534	31547	52893	52893					0.08584306684861076
RAPIRQKCV	9	Unmodified	_RAPIRQKCV_					0	0	0			REV__ENSG00000168386|ENST00000477258|FILIP1L	REV__ENSG00000168386|ENST00000477258|FILIP1L	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	535.81621	1069.61787	-0.091924	-4.9255E-05	2.3559	0.0012623	2.264	0.0012131	535.8178493049433	99.302	1.7934	99.351	99.017	100.81	0.049828	0.042178	0.0014329	NaN	30.504	71	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	385560	+		46873	21482	31534	31547							0.08584306684861076
RAPIRQKCV	9	Unmodified	_RAPIRQKCV_					0	0	0			REV__ENSG00000168386|ENST00000477258|FILIP1L	REV__ENSG00000168386|ENST00000477258|FILIP1L	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	535.81621	1069.61787	0.82299	0.00044097	1.6752	0.0008976	2.4982	0.0013386	535.8173401968428	99.112	1.3531	99.268	98.814	100.17	0.15659	-0.040899	0.00070343	NaN	30.504	43	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	354400	+		46874	21482	31534	31547							0.08584306684861076
RAPKHVLFQR	10	Unmodified	_RAPKHVLFQR_					0	0	0		ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.326171875	2	626.375281	1250.73601	-0.5161	-0.00032327	3.7902	0.0023741	3.2741	0.0020508	626.3775534004373	53.802	1.5207	53.777	52.583	54.104	-0.024754					52	37	2	0	0	0	0.37624	1	4758	4758		25.574	2.0514	1	43590			46875	5364	31535	31548	52894	52894					0.12067002265007432
RAPKHVLFQR	10	Unmodified	_RAPKHVLFQR_					0	0	0		ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	626.375281	1250.73601	1.2848	0.00080476	2.5322	0.0015861	3.817	0.0023909	626.8787924086546	53.372	0.7939	53.42	52.843	53.637	0.047802	-0.11367	-0.0011159	NaN	25.574	38	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86413			46876	5364	31535	31548							0.12067002265007432
RAPLLTLALAA	11	Unmodified	_RAPLLTLALAA_					0	0	0			REV__nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	REV__nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.353515625	2	555.355691	1108.69683	-0.86355	-0.00047958	-3.4797	-0.0019325	-4.3433	-0.0024121	555.3536421650435	101.16	2.3681	101.19	100.7	103.07	0.031036					166	56	5	0	0	0	0.72918	1	10780	10780		26.693	4.733	1	6361400	+		46877	16862	31536	31549	52895	52895					0.14682857190791765
RAPLLTLALAA	11	Unmodified	_RAPLLTLALAA_					0	0	0			REV__nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	REV__nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.3530883789062	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.75495	1	10502	10502		20.947	0	1	5963400	+		46878	16862	31536	31549	52896	52896					0.14682857190791765
RAPLPPGP	8	Unmodified	_RAPLPPGP_					0	0	0			REV__ENSG00000197496|ENST00000359271|SLC2A10	REV__ENSG00000197496|ENST00000359271|SLC2A10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7367248535156	2	402.739963	803.465373	-1.0067	-0.00040545	-1.8183	-0.00073229	-2.825	-0.0011377	402.73907914939394	40.848	1.2743	41.24	40.867	42.142	0.39209					61	35	3	0	0	0	0.82464	1	3497	3497		21.702	0	1	1860800	+		46879	23238	31537	31550	52897	52897					0.05577854279749772
RAPNSLHRQ	9	Unmodified	_RAPNSLHRQ_					0	0	0			REV__ENST00000533518.5_3_16:31095113-31102425:-|nuORF	REV__ENST00000533518.5_3_16:31095113-31102425:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.8002319335938	2	539.796863	1077.57917	1.5892	0.00085785	3.9236	0.002118	5.5128	0.0029758	539.7987299992417	26.686	0.63107	26.345	26.006	26.637	-0.34035					24	13	3	0	0	0	0.38563	1	1490	1490		58.782	4.0056	1	201220	+		46880	20231	31538	31551	52898	52898					0.04348717374705302
RAPNSLHRQ	9	Unmodified	_RAPNSLHRQ_					0	0	0			REV__ENST00000533518.5_3_16:31095113-31102425:-|nuORF	REV__ENST00000533518.5_3_16:31095113-31102425:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	539.796863	1077.57917	1.5892	0.00085785	3.9236	0.002118	5.5128	0.0029758	539.7987299992417	26.686	0.63107	26.345	26.006	26.637	-0.34035	-0.086013	-0.00068954	NaN	58.782	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	201220	+		46881	20231	31538	31551							0.04348717374705302
RAPPTSILDGV	11	Unmodified	_RAPPTSILDGV_					0	0	0			REV__ENST00000598558.5_1_19:41083239-41086365:+|nuORF	REV__ENST00000598558.5_1_19:41083239-41086365:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.3212280273438	2	563.316763	1124.61897	-1.2505	-0.00070442	1.3631	0.00076785	0.11259	6.3424E-05	563.8178015744215	55.91	0.93718	55.9	55.247	56.184	-0.010136					34	25	2	0	0	0	0.70737	1	4985	4985		30.318	5.7985	1	136080	+		46882	29285	31539	31552	52899	52899					0.06164799534758458
RAPPVVPAG	9	Unmodified	_RAPPVVPAG_					0	0	0		ENST00000565696.1_1_16:27353421-27356207:+|nuORF;ENST00000543915.6_1_16:27325322-27356207:+|nuORF;ENST00000566117.5_1_16:27325059-27356207:+|nuORF	ENST00000565696.1_1_16:27353421-27356207:+|nuORF	ENST00000565696.1_1_16:27353421-27356207:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2574157714844	2	432.25852	862.502486	0.40609	0.00017553	-1.8282	-0.00079027	-1.4221	-0.00061473	432.2575947247643	68.412	1.5069	68.797	68.224	69.731	0.38482					60	35	2	0	0	0	0.7932	1	7527	7527		26.796	0	1	399210			46883	13566	31540	31553	52900	52900					0.06573525825513116
RAPRLRLVK	9	Unmodified	_RAPRLRLVK_					0	0	0			REV__ENST00000409979.6_1_2:228336893-228337256:+|nuORF	REV__ENST00000409979.6_1_2:228336893-228337256:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	554.8287963867188	2	554.874917	1107.73528	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.682	1	60.783	60.283	61.283	0.10082								0	0	0	0.36148	1	5261	5261		11.511	0.64546	1		+		46884	26361	31541	31554	52901	52901					0.185722076159891
RAPSNRVKGIP	11	Unmodified	_RAPSNRVKGIP_					0	0	0		ENSG00000099899|ENST00000252136|TRMT2A;ENST00000404751.7_2_22:20100088-20100440:-|nuORF;ENST00000487668.5_1_22:20100088-20100349:-|nuORF;ENST00000480339.1_1_22:20100088-20100591:-|nuORF;ENST00000487378.1_1_22:20100088-20100785:-|nuORF	ENSG00000099899|ENST00000252136|TRMT2A	ENSG00000099899|ENST00000252136|TRMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8561401367188	2	597.856921	1193.69929	-1.2962	-0.00077492	0.5934	0.00035477	-0.70276	-0.00042015	598.3589924641743	94.317	5.5544	94.515	93.356	98.911	0.19827					368	130	4	0	0	0	0.70737	1	9497	9497		30.318	2.4355	1	9481100			46885	1774	31542	31555	52902	52902					0.11018705648461946
RAPTLGPAP	9	Unmodified	_RAPTLGPAP_					0	0	0			REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I	REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2558898925781	2	440.255977	878.497401	-1.4995	-0.00066014	-0.016865	-7.4251E-06	-1.5163	-0.00066757	440.2559096543124	60.596	0.55002	60.697	60.508	61.058	0.10082					39	23	2	0	0	0	0.7932	1	5260	5260		25.45	0	1	235130	+		46886	17176	31543	31556	52903	52903					0.05329221962892916
RAPTPGLVF	9	Unmodified	_RAPTPGLVF_					0	0	0			REV__ENSG00000137218|ENST00000373018|FRS3	REV__ENSG00000137218|ENST00000373018|FRS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2762451171875	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.7932	1	8642	8642		25.45	0.93098	1	7438100	+		46887	19369	31544	31557	52904	52904					0.0643408151404401
RAPWVGPD	8	Unmodified	_RAPWVGPD_					0	0	0			REV__ENST00000599791.1_1_19:49952679-49954831:-|nuORF	REV__ENST00000599791.1_1_19:49952679-49954831:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.2322082519531	2	449.232502	896.450451	-0.14348	-6.4457E-05	-4.0788	-0.0018323	-4.2223	-0.0018968	449.2306007992336	83.429	3.7259	83.496	82.088	85.814	0.066719					221	85	3	0	0	0	0.92457	1	8240	8240		47.916	15.961	1	236580	+		46888	29302	31545	31558	52905	52905					-0.0019163758825015975
RAPYGPQL	8	Unmodified	_RAPYGPQL_					0	0	0		nc|ENSG00000185247|P43364-2|MAGEA11;ENST00000518694.1_1_X:148796119-148798433:+|nuORF;ENSG00000185247|ENST00000355220|MAGEA11	nc|ENSG00000185247|P43364-2|MAGEA11	nc|ENSG00000185247|P43364-2|MAGEA11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.248779296875	2	451.248152	900.481751	0.4571	0.00020627	0.75976	0.00034284	1.2169	0.00054911	451.2483516516998	67.877	1.2398	68.005	67.282	68.522	0.12748					79	46	2	0	0	0	0.86288	1	6071	6071		26.796	2.5934	1	170990			46889	7693	31546	31559	52906	52906					0.027529354458465605
RAQEATLRVSA	11	Unmodified	_RAQEATLRVSA_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	601.8580322265625	2	601.336018	1200.65748	-1.2851	-0.0007728	-4.174	-0.00251	-5.4592	-0.0032828	601.3330977481738	103.34	0.62134	103.45	103.27	103.89	0.11494					23	15	2	0	0	0	0.17415	1	10867	10867		27.047	0	1	248350	+		46890	18894	31547	31560	52907	52907					0.06518105169288901
RAQEKGKRK	9	Unmodified	_RAQEKGKRK_					0	0	0			REV__ENST00000583273.5_1_17:56603775-56606703:-|nuORF	REV__ENST00000583273.5_1_17:56603775-56606703:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.837158203125	2	550.835988	1099.65742	0.32251	0.00017765	2.2121	0.0012185	2.5346	0.0013962	550.837103460483	24.46	0.63952	24.414	24.117	24.757	-0.04598					22	13	2	0	0	0	0.77696	1	950	950		31.53	4.8369	1	49837	+		46891	29067	31548	31561	52908	52908					0.1115814995994242
RAQLLLRIL	9	Unmodified	_RAQLLLRIL_					0	0	0			REV__ENST00000479659.5_1_1:1561777-1565907:+|nuORF	REV__ENST00000479659.5_1_1:1561777-1565907:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.3737182617188	2	548.371675	1094.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.224	1	37.163	36.663	37.663	-0.060333								0	0	0	0.33676	1	2112	2112		18.324	0.95945	1		+		46892	23241	31549	31562	52909	52909					0.18522269664595115
RAQLLPNVKVN	11	Unmodified	_RAQLLPNVKVN_					0	0	0			REV__ENST00000560298.1_1_15:57024815-57024902:-|nuORF	REV__ENST00000560298.1_1_15:57024815-57024902:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3796997070312	2	626.380229	1250.7459	2.0982	0.0013142	-3.0036	-0.0018814	-0.90548	-0.00056717	626.3782628803294	105.51	2.7267	105.67	104.93	107.65	0.15583					187	94	2	0	0	0	0.69071	2	12808	12808;12884		30.318	6.5904	1	2939000	+		46893	28755	31550	31563	52910;52911	52910					0.1305614547973164
RAQQLLAN	8	Unmodified	_RAQQLLAN_					0	0	0		ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2627258300781	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.884	1	7691	7691		33.516	0.70317	1	4061400			46894	3668	31551	31564	52912	52912					0.054357228488470355
RARAAEHTLL	10	Unmodified	_RARAAEHTLL_					0	0	0		nc|ENSG00000130589|Q9BYK8|HELZ2;ENSG00000130589|ENST00000467148|HELZ2;nc|ENSG00000130589|Q9BYK8-2|HELZ2	nc|ENSG00000130589|Q9BYK8|HELZ2	nc|ENSG00000130589|Q9BYK8|HELZ2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.3302612304688	2	569.327996	1136.64144	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.355	1	79.355	78.855	79.855	0								0	0	0	0.45132	1	7297	7297		34.173	0.65696	1				46895	3658	31552	31565	52913	52913					0.07858443723034725
RARAAPTP	8	Unmodified	_RARAAPTP_					0	0	0			REV__ENST00000343958.8_1_12:95604994-95611239:-|nuORF	REV__ENST00000343958.8_1_12:95604994-95611239:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.22723388671875	2	420.245944	838.477334	-1.6277	-0.00068405	0.47368	0.00019906	-1.1541	-0.00048499	420.2466253278525	80.518	0.87783	80.624	80.465	81.343	0.10527					34	22	3	0	0	0	0.4196	1	7610	7610		21.96	9.0007	1	65834	+		46896	25298	31553	31566	52914	52914					0.051634710229222947
RARAGRPHAF	10	Unmodified	_RARAGRPHAF_					0	0	0		ENST00000445792.7_1_X:305849-322301:-|nuORF	ENST00000445792.7_1_X:305849-322301:-|nuORF	ENST00000445792.7_1_X:305849-322301:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.7948608398438	2	569.820673	1137.62679	0.66187	0.00037714	-4.0251	-0.0022936	-3.3632	-0.0019164	570.3200287184922	84.11	0.28577	84.561	84.354	84.64	0.45139					9	6	2	0	0	0	0.37624	1	9816	9816		16.473	0	1	89495			46897	11829	31554	31567	52915	52915					0.06348416365540288
RARAKVRPRR	10	Unmodified	_RARAKVRPRR_					0	0	0			REV__ENST00000451195.7_1_15:83679069-83680265:-|nuORF	REV__ENST00000451195.7_1_15:83679069-83680265:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.4126586914062	2	633.410521	1264.80649	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.211	1	21.292	20.792	21.792	0.081615								0	0	0	0.45132	1	581	581		14.865	0.72775	1		+		46898	26882	31555	31568	52916	52916					0.18467720373337215
RARALSSI	8	Unmodified	_RARALSSI_					0	0	0		ENSG00000185504|ENST00000327787|FAAP100;nc|ENSG00000185504|Q0VG06-3|FAAP100;nc|ENSG00000185504|Q0VG06-2|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2616882324219	2	437.266876	872.519199	0.089398	3.9091E-05	-2.6709	-0.0011679	-2.5815	-0.0011288	437.26561767206454	28.999	0.99977	29.111	28.354	29.354	0.11225					70	52	2	0	0	0	0.84341	1	1239	1239		24.203	3.7209	1	59113			46899	7718	31556	31569	52917	52917					0.0778402671146523
RARAPPTT	8	Unmodified	_RARAPPTT_					0	0	0		ENST00000571637.1_1_17:3808599-3819210:-|nuORF	ENST00000571637.1_1_17:3808599-3819210:-|nuORF	ENST00000571637.1_1_17:3808599-3819210:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25146484375	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.884	1	7469	7469		33.516	1.5607	1	1788100			46900	14001	31557	31570	52918	52918					0.048394536773685104
RARATVAPLP	10	Unmodified	_RARATVAPLP_					0	0	0		nc|ENSG00000159374|Q8TC57-3|M1AP;ENST00000464686.5_1_2:74785845-74804048:-|nuORF;nc|ENSG00000159374|Q8TC57-4|M1AP;ENSG00000159374|ENST00000421985|M1AP	nc|ENSG00000159374|Q8TC57-3|M1AP	nc|ENSG00000159374|Q8TC57-3|M1AP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3234252929688	2	526.322183	1050.62981	0.47734	0.00025124	4.3102	0.0022686	4.7876	0.0025198	526.3243924608943	61.628	1.0384	61.747	61.573	62.611	0.11901					72	48	2	0	0	0	0.81018	1	5392	5392		38.806	1.647	1	411810			46901	5528	31558	31571	52919	52919					0.10652246699692114
RARATVAPLP	10	Unmodified	_RARATVAPLP_					0	0	0		nc|ENSG00000159374|Q8TC57-3|M1AP;ENST00000464686.5_1_2:74785845-74804048:-|nuORF;nc|ENSG00000159374|Q8TC57-4|M1AP;ENSG00000159374|ENST00000421985|M1AP	nc|ENSG00000159374|Q8TC57-3|M1AP	nc|ENSG00000159374|Q8TC57-3|M1AP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	526.322183	1050.62981	0.47956	0.0002524	4.4822	0.0023591	4.9618	0.0026115	526.3245727280963	62.085	0.62481	62.052	61.746	62.371	-0.033173	0.24131	-6.3216E-06	NaN	38.806	32	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71283			46902	5528	31558	31571							0.10652246699692114
RARATVAPLP	10	Unmodified	_RARATVAPLP_					0	0	0		nc|ENSG00000159374|Q8TC57-3|M1AP;ENST00000464686.5_1_2:74785845-74804048:-|nuORF;nc|ENSG00000159374|Q8TC57-4|M1AP;ENSG00000159374|ENST00000421985|M1AP	nc|ENSG00000159374|Q8TC57-3|M1AP	nc|ENSG00000159374|Q8TC57-3|M1AP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	526.322183	1050.62981	-0.48655	-0.00025608	4.8517	0.0025536	4.3652	0.0022975	526.3246695741319	61.766	0.82098	61.796	61.595	62.416	0.029575	-0.014745	0.00038265	NaN	38.806	43	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110220			46903	5528	31558	31571							0.10652246699692114
RARATVAPLP	10	Unmodified	_RARATVAPLP_					0	0	0		nc|ENSG00000159374|Q8TC57-3|M1AP;ENST00000464686.5_1_2:74785845-74804048:-|nuORF;nc|ENSG00000159374|Q8TC57-4|M1AP;ENSG00000159374|ENST00000421985|M1AP	nc|ENSG00000159374|Q8TC57-3|M1AP	nc|ENSG00000159374|Q8TC57-3|M1AP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	526.322183	1050.62981	-0.18046	-9.4982E-05	4.7669	0.0025089	4.5865	0.002414	526.324521462419	61.541	0.75476	61.648	61.595	62.35	0.10743	-0.16278	0.00029339	NaN	38.806	55	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	293760			46904	5528	31558	31571							0.10652246699692114
RARDEERRRQQ	11	Unmodified	_RARDEERRRQQ_					0	0	0		nc|ENSG00000130396|P55196-6|AFDN	nc|ENSG00000130396|P55196-6|AFDN	nc|ENSG00000130396|P55196-6|AFDN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.2149353027344	3	500.601449	1498.78252	0.070529	3.5307E-05	3.8882	0.0019464	3.9587	0.0019817	500.60340754371344	23.458	0.35755	23.077	22.887	23.244	-0.38178					13	7	2	0	0	0	0.17996	1	1034	1034		17.167	7.0628	1	49417			46905	14905	31559	31572	52920	52920					0.0530779035834712
RARERPSGQAR	11	Unmodified	_RARERPSGQAR_					0	0	0			REV__ENST00000377403.6_1_1:9294861-9305106:+|nuORF	REV__ENST00000377403.6_1_1:9294861-9305106:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3648681640625	2	642.355608	1282.69666	7.1449	0.0045895	3.1239	0.0020067	10.269	0.0065962	642.3585751725324	110.49	1.1397	110.55	110.17	111.3	0.058884					162	41	4	0	0	0	0.51007	1	13378	13378		51.193	5.2407	1	2259100	+		46906	25867	31560	31573	52921	52921					0.06662250243493872
RARFRELRAK	10	Unmodified	_RARFRELRAK_					0	0	0			REV__ENSG00000123307|ENST00000242994|NEUROD4	REV__ENSG00000123307|ENST00000242994|NEUROD4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.23663330078125	3	434.9337	1301.77927	0.30058	0.00013073	3.9718	0.0017275	4.2724	0.0018582	434.934630787676	28.292	0.09577	28.314	28.236	28.332	0.021946					6	4	2	0	0	0	0.37624	1	1155	1155		14.694	0	1	16844	+		46907	18534	31561	31574	52922	52922					0.1404519204229473
RARFSRDLL	9	Unmodified	_RARFSRDLL_					0	0	0			REV__ENSG00000170128|ENST00000304244|GPR25	REV__ENSG00000170128|ENST00000304244|GPR25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3299560546875	2	567.330539	1132.64652	0.27026	0.00015333	-1.2412	-0.00070419	-0.97098	-0.00055087	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.78983	1	10989	10989		27.882	1.8189	1	6007000	+		46908	21632	31562	31575	52923	52923					0.0855074758567298
RARGAPAN	8	Unmodified	_RARGAPAN_					0	0	0		ENST00000560975.5_1_15:63335715-63353895:+|nuORF	ENST00000560975.5_1_15:63335715-63353895:+|nuORF	ENST00000560975.5_1_15:63335715-63353895:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7298889160156	2	406.727918	811.441283	-0.18786	-7.6407E-05	0.54475	0.00022157	0.3569	0.00014516	406.7280690694445	76.123	2.0682	76.173	74.921	76.99	0.049194					93	66	2	0	0	0	0.89962	1	7398	7398		38.806	5.2906	1	123610			46909	13825	31563	31576	52924	52924					0.02802013846076079
RARGGGPR	8	Unmodified	_RARGGGPR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.23736572265625	2	413.74136	825.468167	-0.46579	-0.00019272	-2.9566	-0.0012232	-3.4223	-0.001416	413.7401105162224	74.082	1.208	74.039	73.785	74.993	-0.043701					59	42	2	0	0	0	0.4196	1	7368	7368		17.365	0	1	199760	+		46910	24647	31564	31577	52925	52925					0.048451224572772844
RARGKHGG	8	Unmodified	_RARGKHGG_					0	0	0			REV__ENSG00000106244|ENST00000350498|PDAP1	REV__ENSG00000106244|ENST00000350498|PDAP1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.77490234375	2	419.74136	837.468167	-1.8513	-0.00077706	-1.32	-0.00055404	-3.1712	-0.0013311	419.7416235110434	42.146	0.16623	42.146	42.018	42.185	0					6	3	2	0	0	0	0.4196	1	2904	2904		19.36	4.6959	1	15522	+		46911	17601	31565	31578	52926	52926					0.04293122457272602
RARGPRSVF	9	Unmodified	_RARGPRSVF_					0	0	0			REV__ENST00000524230.6_3_3:126326756-126373974:-|nuORF	REV__ENST00000524230.6_3_3:126326756-126373974:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.304324	1044.5941	0.71899	0.00037625	-2.2367	-0.0011705	-1.5177	-0.00079421	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.78058	1	8738	8738		30.504	0.18592	1	13442000	+		46912	28157	31566	31579	52927	52927					0.07358209242693192
RARGRART	8	Unmodified	_RARGRART_					0	0	0			REV__ENSG00000184571|ENST00000616349|PIWIL3	REV__ENSG00000184571|ENST00000616349|PIWIL3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2885437011719	2	472.286466	942.558379	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.2	1	118.18	117.68	118.68	-0.024208								0	0	0	0.3037	1	13090	13090		18.324	0	1		+		46913	22692	31567	31580	52928	52928					0.08480171785697621
RARGRGRGQRR	11	Unmodified	_RARGRGRGQRR_					0	0	0			REV__ENST00000457270.5_1_22:22311488-22312070:-|nuORF	REV__ENST00000457270.5_1_22:22311488-22312070:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.6008605957031	3	442.599714	1324.77731	-0.15208	-6.7312E-05	3.1519	0.001395	2.9998	0.0013277	442.6010716654733	103.97	1.4842	103.96	103.51	105	-0.0035706					84	35	4	0	0	0	0.75457	1	11213	11213		21.032	0.19508	1	603650	+		46914	17130	31568	31581	52929	52929					0.12791576077052014
RARGRGRGQRR	11	Unmodified	_RARGRGRGQRR_					0	0	0			REV__ENST00000457270.5_1_22:22311488-22312070:-|nuORF	REV__ENST00000457270.5_1_22:22311488-22312070:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.6009216308594	3	442.599714	1324.77731	2.7378	0.0012118	0.38475	0.00017029	3.1226	0.0013821	442.5997945412009	103.8	1.4388	103.76	103.37	104.81	-0.043755					90	34	4	0	0	0	0.75457	1	11412	11412		21.032	1.7696	1	569000	+		46915	17130	31568	31581	52930	52930					0.12791576077052014
RARHRGGPRA	10	Unmodified	_RARHRGGPRA_					0	0	0		ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000148408|Q00975-2|CACNA1B	ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3325805664062	2	567.329196	1132.64384	1.4941	0.00084767	0.014436	8.1901E-06	1.5086	0.00085586	567.3291475254166	114.35	1.3512	114.37	114.18	115.54	0.026466					54	36	2	0	0	0	0.86718	1	12509	12509		27.882	3.6795	1	81930			46916	14984;4960	31569	31582	52931	52931					0.08282336971387849
RARIMQRKRG	10	Unmodified	_RARIMQRKRG_					0	0	0		ENST00000590271.5_1_18:76847676-76954399:+|nuORF;nc|ENSG00000166377|O43861-2|ATP9B;ENSG00000166377|ENST00000426216|ATP9B	ENST00000590271.5_1_18:76847676-76954399:+|nuORF	ENST00000590271.5_1_18:76847676-76954399:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.30584716796875	3	424.591168	1270.75168	-1.8174	-0.00077165	-1.7826	-0.00075686	-3.6	-0.0015285	424.59029926479326	38.539	0.52364	38.549	38.263	38.786	0.010708					22	14	2	0	0	0	0.37624	1	2282	2282		20.03	9.9266	1	80786			46917	6186	31570	31583	52932	52932					0.12712965510399954
RARIYSSD	8	Unmodified	_RARIYSSD_					0	0	0		nc|ENSG00000166477|Q8WVC0-2|LEO1;ENSG00000166477|ENST00000299601|LEO1	nc|ENSG00000166477|Q8WVC0-2|LEO1	nc|ENSG00000166477|Q8WVC0-2|LEO1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.2877502441406	2	484.251423	966.488293	1.9874	0.00096238	2.9872	0.0014466	4.9746	0.002409	484.2527027846146	94.952	0.58724	94.893	94.598	95.185	-0.058319					17	13	2	0	0	0	0.4196	1	10106	10106		17.365	0	1	44431			46918	6201	31571	31584	52933	52933					0.003708286065716493
RARKALAS	8	Unmodified	_RARKALAS_					0	0	0		nc|ENSG00000012817|Q9BY66-2|KDM5D;ENSG00000012817|ENST00000317961|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D;ENST00000469599.6_1_Y:21868632-21871788:-|nuORF;ENST00000492117.1_1_Y:21868632-21877911:-|nuORF	nc|ENSG00000012817|Q9BY66-2|KDM5D	nc|ENSG00000012817|Q9BY66-2|KDM5D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7748107910156	2	436.774868	871.535184	-0.16229	-7.0884E-05	0.14035	6.1301E-05	-0.021941	-9.5833E-06	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.87064	1	9523	9523		29.15	2.3535	1	15341000			46919	804	31572	31585	52934	52934					0.09427732948370249
RARKLSTDL	9	Unmodified	_RARKLSTDL_					0	0	0		nc|ENSG00000133612|Q96P47-5|AGAP3;nc|ENSG00000133612|Q96P47|AGAP3;nc|ENSG00000133612|Q96P47-2|AGAP3;ENSG00000133612|ENST00000397238|AGAP3;nc|ENSG00000133612|Q96P47-3|AGAP3;nc|ENSG00000133612|Q96P47-6|AGAP3	nc|ENSG00000133612|Q96P47-5|AGAP3	nc|ENSG00000133612|Q96P47-5|AGAP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8238525390625	2	530.317097	1058.61964	1.1766	0.00062396	1.0961	0.00058127	2.2727	0.0012052	530.31777393265	18.972	0.56728	18.495	18.171	18.738	-0.47694					19	12	2	0	0	0	0.78058	1	460	460		30.504	2.6214	1	58253			46920	3883	31573	31586	52935	52935					0.09267638974461079
RARLFVGG	8	Unmodified	_RARLFVGG_					0	0	0		ENST00000554271.5_1_14:59951307-59951502:+|nuORF	ENST00000554271.5_1_14:59951307-59951502:+|nuORF	ENST00000554271.5_1_14:59951307-59951502:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2635192871094	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.81548	1	2800	2800		20.482	1.1219	1	21381000			46921	13717	31574	31587	52936	52936					0.07144347919665961
RARLHMGIRLS	11	Unmodified	_RARLHMGIRLS_					0	0	0		ENSG00000204099|ENST00000407683|NEU4;nc|ENSG00000204099|Q8WWR8-2|NEU4;nc|ENSG00000204099|Q8WWR8-3|NEU4	ENSG00000204099|ENST00000407683|NEU4	ENSG00000204099|ENST00000407683|NEU4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2565612792969	3	437.259307	1308.75609	-0.16089	-7.0349E-05	-4.3574	-0.0019053	-4.5183	-0.0019757	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.71207	1	10464	10464		29.551	1.9068	1	727380			46922	8411	31575	31588	52937	52937					0.11406429933344953
RARPDLAA	8	Unmodified	_RARPDLAA_					0	0	0		ENSG00000132518|ENST00000254854|GUCY2D	ENSG00000132518|ENST00000254854|GUCY2D	ENSG00000132518|ENST00000254854|GUCY2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25225830078125	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.86288	1	7933	7933		26.796	2.5934	1	2494100			46923	3804	31576	31589	52938	52938					0.048394536773685104
RARPGKQGL	9	Unmodified	_RARPGKQGL_					0	0	0		ENST00000314852.2_1_15:75940516-75940885:-|nuORF	ENST00000314852.2_1_15:75940516-75940885:-|nuORF	ENST00000314852.2_1_15:75940516-75940885:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7956237792969	2	491.798875	981.583196	-2.0878	-0.0010268	-4.3545	-0.0021415	-6.4423	-0.0031683	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.78536	1	4920	4920		29.15	1.2673	1	1484300			46924	9967	31577	31590	52939	52939					0.09166806868415733
RARPIWYV	8	Unmodified	_RARPIWYV_					0	0	0		nc|ENSG00000197444|Q9ULD0-3|OGDHL;nc|ENSG00000197444|Q9ULD0-2|OGDHL;ENSG00000197444|ENST00000374103|OGDHL;ENST00000490844.1_1_10:50943276-50946169:-|nuORF	nc|ENSG00000197444|Q9ULD0-3|OGDHL	nc|ENSG00000197444|Q9ULD0-3|OGDHL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8209228515625	2	530.806168	1059.59778	0.66705	0.00035407	0.21388	0.00011353	0.88093	0.0004676	531.3077089453204	82.379	0.17044	82.524	82.418	82.588	0.1455					5	3	2	0	0	0	0.4196	1	7931	7931		44.531	0.15388	1	30036			46925	8164	31578	31591	52940	52940					0.07036879016550301
RARPSAPTPPR	11	Unmodified	_RARPSAPTPPR_					0	0	0			REV__ENSG00000213445|ENST00000534313|SIPA1	REV__ENSG00000213445|ENST00000534313|SIPA1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	603.2435302734375	2	603.34672	1204.67889	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.855	1	19.834	19.334	20.334	-0.020922								0	0	0	0.56276	1	444	444		20.837	0.84038	1		+		46926	23617	31579	31592	52941	52941					0.08473534988638676
RARPSGVI	8	Unmodified	_RARPSGVI_					0	0	0			REV__ENST00000419712.7_1_17:27043073-27045143:-|nuORF	REV__ENST00000419712.7_1_17:27043073-27045143:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2618713378906	2	428.261594	854.508634	-1.6655	-0.00071328	1.873	0.00080211	0.20742	8.8832E-05	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.884	1	9320	9320		33.516	0	1	44776000	+		46927	24761	31580	31593	52942	52942					0.07556044057048439
RARPSGVI	8	Unmodified	_RARPSGVI_					0	0	0			REV__ENST00000419712.7_1_17:27043073-27045143:-|nuORF	REV__ENST00000419712.7_1_17:27043073-27045143:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.26153564453125	2	428.261594	854.508634	-1.021	-0.00043726	1.2368	0.00052966	0.21577	9.2404E-05	428.26203928148993	90.556	2.3584	91.026	90.524	92.882	0.47068					198	56	5	0	0	0	0.90465	1	10869	10869		40.573	0	1	38446000	+		46928	24761	31580	31593	52943	52943					0.07556044057048439
RARRGHVIRPF	11	Unmodified	_RARRGHVIRPF_					0	0	0			REV__nc|ENSG00000154134|Q96MS0-2|ROBO3	REV__nc|ENSG00000154134|Q96MS0-2|ROBO3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6086120605469	3	455.609328	1363.80615	-0.20528	-9.3526E-05	-1.8281	-0.00083289	-2.0334	-0.00092642	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.72892	1	7474	7474		26.75	0.85799	1	1835000	+		46929	29941	31581	31594	52944	52944					0.13880300653477207
RARRLIIPRL	10	Unmodified	_RARRLIIPRL_					0	0	0			REV__ENSG00000132825|ENST00000370996|PPP1R3D	REV__ENSG00000132825|ENST00000370996|PPP1R3D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	632.4314575195312	2	632.427848	1262.84114	1.2265	0.00077567	2.1272	0.0013453	3.3537	0.002121	632.4287764251125	108.29	0.57515	108.33	108.03	108.61	0.034355					58	25	3	0	0	0	0.86763	1	11895	11895		26.693	0	1	3438700	+		46930	19037	31582	31595	52945	52945					0.2202354346145512
RARRPLLRPL	10	Unmodified	_RARRPLLRPL_					0	0	0			REV__ENST00000533277.5_1_11:66610677-66610866:+|nuORF	REV__ENST00000533277.5_1_11:66610677-66610866:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	624.3304443359375	2	624.412198	1246.80984	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.911	1	52.982	52.482	53.482	0.070713								0	0	0	0.45132	1	4293	4293		15.642	5.3766	1		+		46931	28340	31583	31596	52946	52946					0.19630970427351713
RARRRRKPRV	10	Unmodified	_RARRRRKPRV_					0	0	0		ENSG00000183072|ENST00000329198|NKX2-5	ENSG00000183072|ENST00000329198|NKX2-5	ENSG00000183072|ENST00000329198|NKX2-5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27410888671875	3	450.964105	1349.87049	-0.14033	-6.3285E-05	-1.9493	-0.00087908	-2.0897	-0.00094236	450.96342932342606	93.327	0.12021	93.397	93.296	93.416	0.069595					4	2	2	0	0	0	0.37624	1	9675	9675		7.3997	0	1	18418			46932	7498	31584	31597	52947	52947					0.20954500530274345
RARRRRRRRRR	11	Unmodified	_RARRRRRRRRR_					0	0	0		ENSG00000185052|ENST00000328041|SLC24A3;ENST00000253008.2_1_9:133556683-133557598:+|nuORF	ENSG00000185052|ENST00000328041|SLC24A3;ENST00000253008.2_1_9:133556683-133557598:+|nuORF	ENSG00000185052|ENST00000328041|SLC24A3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	551.0283203125	3	551.026873	1650.05879	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.933	1	15.909	15.409	16.409	-0.024035								0	0	0	0.56276	1	91	91		3.4087	0	1				46933	7675;9314	31585	31598	52948	52948					0.2597617122723932
RARSAALK	8	Unmodified	_RARSAALK_					0	0	0		ENST00000552226.1_1_12:32490575-32491939:+|nuORF	ENST00000552226.1_1_12:32490575-32491939:+|nuORF	ENST00000552226.1_1_12:32490575-32491939:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.77386474609375	2	436.774868	871.535184	0.37686	0.0001646	-3.0257	-0.0013215	-2.6488	-0.0011569	436.77341022193644	26.318	0.4133	26.346	26.113	26.526	0.02817					33	18	2	0	0	0	0.7961	1	995	995		17.365	0.89182	1	141420			46934	13678	31586	31599	52949	52949					0.09427732948370249
RARSLQLQP	9	Unmodified	_RARSLQLQP_					0	0	0		ENST00000331242.11_1_7:86781748-86792930:+|nuORF;ENST00000446796.6_1_7:86781748-86792851:+|nuORF	ENST00000331242.11_1_7:86781748-86792930:+|nuORF	ENST00000331242.11_1_7:86781748-86792930:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2676391601562	2	534.817264	1067.61998	2.3687	0.0012668	3.1765	0.0016988	5.5452	0.0029656	535.3209592717927	25.537	0.37383	25.106	24.939	25.312	-0.4311					13	8	2	0	0	0	0.20789	1	1352	1352		20.947	0	1	34753			46935	10119	31587	31600	52950	52950					0.08887058694335792
RARSSLRKS	9	Unmodified	_RARSSLRKS_					0	0	0			REV__nc|ENSG00000111641|P46087-3|NOP2	REV__nc|ENSG00000111641|P46087-3|NOP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8211059570312	2	530.820338	1059.62612	-0.85099	-0.00045172	2.1722	0.001153	1.3212	0.0007013	530.8213432265311	82.745	2.1308	82.745	82.264	84.395	0					134	52	5	0	0	0	0.78983	1	7688	7688		27.882	1.1893	1	4119600	+		46936	17877	31588	31601	52951	52951					0.09869576925848378
RARSSVPP	8	Unmodified	_RARSSVPP_					0	0	0			REV__ENST00000568542.5_1_16:2255373-2256424:+|nuORF	REV__ENST00000568542.5_1_16:2255373-2256424:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2524108886719	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.884	1	7694	7694		33.516	3.0119	1	1788100	+		46937	28900	31589	31602	52952	52952					0.04839453677379879
RARSSVPP	8	Unmodified	_RARSSVPP_					0	0	0			REV__ENST00000568542.5_1_16:2255373-2256424:+|nuORF	REV__ENST00000568542.5_1_16:2255373-2256424:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516174316406	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.884	1	8138	8138		33.516	3.0119	1	2823900	+		46938	28900	31589	31602	52953	52953					0.04839453677379879
RARSSVPP	8	Unmodified	_RARSSVPP_					0	0	0			REV__ENST00000568542.5_1_16:2255373-2256424:+|nuORF	REV__ENST00000568542.5_1_16:2255373-2256424:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2529296875	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.85277	1	8498	8498		25.45	0	1	3292300	+		46939	28900	31589	31602	52954	52954					0.04839453677379879
RARSSVPP	8	Unmodified	_RARSSVPP_					0	0	0			REV__ENST00000568542.5_1_16:2255373-2256424:+|nuORF	REV__ENST00000568542.5_1_16:2255373-2256424:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2516784667969	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.86791	1	8289	8289		28.254	2.8041	1	3370400	+		46940	28900	31589	31602	52955	52955					0.04839453677379879
RARTSSAE	8	Unmodified	_RARTSSAE_					0	0	0			REV__ENST00000587019.5_1_19:13870037-13873207:+|nuORF	REV__ENST00000587019.5_1_19:13870037-13873207:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.2505187988281	2	439.227948	876.441343	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.025	1	16.943	16.443	17.443	-0.0821								0	0	0	0.29755	1	195	195		24.203	1.1603	1		+		46941	29121	31590	31603	52956	52956					-0.0018203094457476254
RARVGGITT	9	Unmodified	_RARVGGITT_					0	0	0		ENST00000527464.5_1_11:47270203-47282963:+|nuORF;ENST00000529540.5_1_11:47269870-47282963:+|nuORF	ENST00000527464.5_1_11:47270203-47282963:+|nuORF	ENST00000527464.5_1_11:47270203-47282963:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7781677246094	2	465.777608	929.540663	-0.69238	-0.0003225	0.76957	0.00035845	0.077191	3.5954E-05	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.62081	1	9430	9430		45.952	7.1458	1	927810			46942	13288	31591	31604	52957	52957					0.07307411740168845
RARVVPAS	8	Unmodified	_RARVVPAS_					0	0	0			REV__nc|ENSG00000132879|Q9H4M3-2|FBXO44	REV__nc|ENSG00000132879|Q9H4M3-2|FBXO44	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2616271972656	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.8347	1	9608	9608		23.042	5.6775	1	55300000	+		46943	29848	31592	31605	52958	52958					0.0755604405703707
RARVVPAS	8	Unmodified	_RARVVPAS_					0	0	0			REV__nc|ENSG00000132879|Q9H4M3-2|FBXO44	REV__nc|ENSG00000132879|Q9H4M3-2|FBXO44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.261474609375	2	428.261594	854.508634	-1.6655	-0.00071328	1.873	0.00080211	0.20742	8.8832E-05	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.7961	5	9258	9031;9172;9234;9258;9308		29.15	4.8398	1	44776000	+		46944	29848	31592	31605	52959;52960;52961;52962;52963	52962					0.0755604405703707
RARVVPAS	8	Unmodified	_RARVVPAS_					0	0	0			REV__nc|ENSG00000132879|Q9H4M3-2|FBXO44	REV__nc|ENSG00000132879|Q9H4M3-2|FBXO44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.261474609375	2	428.261594	854.508634	0.64465	0.00027608	-0.51085	-0.00021878	0.1338	5.7301E-05	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.86677	2	9199	9057;9199		34.173	6.2903	1	40631000	+		46945	29848	31592	31605	52964;52965	52965					0.0755604405703707
RARVVPAS	8	Unmodified	_RARVVPAS_					0	0	0			REV__nc|ENSG00000132879|Q9H4M3-2|FBXO44	REV__nc|ENSG00000132879|Q9H4M3-2|FBXO44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2615661621094	2	428.261594	854.508634	-1.8497	-0.00079216	1.9562	0.00083775	0.10645	4.5588E-05	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.8347	1	9179	9179		23.042	1.3402	1	31323000	+		46946	29848	31592	31605	52966	52966					0.0755604405703707
RARYVAVKGTG	11	Unmodified	_RARYVAVKGTG_					0	0	0			REV__ENSG00000077943|ENST00000378076|ITGA8	REV__ENSG00000077943|ENST00000378076|ITGA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.343017578125	2	589.343646	1176.67274	0.82336	0.00048524	-2.0045	-0.0011814	-1.1812	-0.00069612	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.70737	1	11431	11431		30.318	1.1477	1	9460500	+		46947	16755	31593	31606	52967	52967					0.09147016757128767
RASFLVSITL	10	Unmodified	_RASFLVSITL_					0	0	0			REV__ENST00000462917.1_1_17:39845907-39845994:+|nuORF	REV__ENST00000462917.1_1_17:39845907-39845994:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8308715820312	2	553.832049	1105.64954	-1.4397	-0.00079736	-1.5438	-0.00085498	-2.9835	-0.0016523	553.8309437406523	102.46	0.72263	102.59	102.26	102.98	0.13569					39	17	3	0	0	0	0.86272	1	10745	10745		24.519	0.99649	1	413090	+		46948	27067	31594	31607	52968	52968					0.10094577919812764
RASGAHPN	8	Unmodified	_RASGAHPN_					0	0	0		ENST00000258169.8_1_16:82182192-82182318:-|nuORF	ENST00000258169.8_1_16:82182192-82182318:-|nuORF	ENST00000258169.8_1_16:82182192-82182318:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.2041320800781	2	405.204276	808.393999	-0.0495	-2.0058E-05	1.1279	0.00045704	1.0784	0.00043698	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.8537	1	7757	7757		25.574	5.0922	1	162370			46949	9367	31595	31608	52969	52969					-0.017862654249142906
RASLAPVKLK	10	Unmodified	_RASLAPVKLK_					0	0	0		nc|ENSG00000135931|Q7Z3E5-2|ARMC9;ENSG00000135931|ENST00000611582|ARMC9	nc|ENSG00000135931|Q7Z3E5-2|ARMC9	nc|ENSG00000135931|Q7Z3E5-2|ARMC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.8555297851562	2	541.855858	1081.69716	-1.3656	-0.00073996	1.8977	0.0010283	0.53206	0.0002883	541.856488876591	29.316	0.56318	29.287	28.954	29.517	-0.029207					26	12	3	0	0	0	0.8545	1	1840	1840		36.447	3.6343	1	251560			46950	4072	31596	31609	52970	52970					0.15958276910646418
RASLDSAGGSG	11	Unmodified	_RASLDSAGGSG_					0	0	0		nc|ENSG00000114993|Q9BST9-3|RTKN;nc|ENSG00000114993|Q9BST9-2|RTKN;ENSG00000114993|ENST00000272430|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.2340393066406	2	489.23597	976.457387	-0.95168	-0.0004656	2.653	0.0012979	1.7013	0.00083234	489.2372701417275	68.289	0.6958	68.349	68.045	68.741	0.059288					41	27	2	0	0	0	0.68532	1	6120	6120		33.922	4.7721	1	129100			46951	2804	31597	31610	52971	52971					-0.03178369498311895
RASLDSAGGSG	11	Unmodified	_RASLDSAGGSG_					0	0	0		nc|ENSG00000114993|Q9BST9-3|RTKN;nc|ENSG00000114993|Q9BST9-2|RTKN;ENSG00000114993|ENST00000272430|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	489.23597	976.457387	-0.71703	-0.0003508	3.1611	0.0015465	2.4441	0.0011957	489.23738697603073	68.042	1.0476	68.177	67.814	68.862	0.13522	-0.095015	0.0011857	NaN	33.922	54	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139300			46952	2804	31597	31610							-0.03178369498311895
RASLDSAGGSG	11	Unmodified	_RASLDSAGGSG_					0	0	0		nc|ENSG00000114993|Q9BST9-3|RTKN;nc|ENSG00000114993|Q9BST9-2|RTKN;ENSG00000114993|ENST00000272430|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	489.23597	976.457387	0.49831	0.00024379	0.91822	0.00044922	1.4165	0.00069302	489.2364393796821	68.162	0.65366	68.29	67.963	68.617	0.12838	0.018143	-0.0010089	NaN	33.922	40	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129000			46953	2804	31597	31610							-0.03178369498311895
RASLNYGGLPT	11	Unmodified	_RASLNYGGLPT_					0	0	0			REV__nc|ENSG00000068024|P56524-2|HDAC4	REV__nc|ENSG00000068024|P56524-2|HDAC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.8059692382812	2	574.806562	1147.59857	-0.26346	-0.00015144	0.47146	0.000271	0.208	0.00011956	574.8065326924051	34.066	0.74987	34.009	33.651	34.401	-0.056385					37	16	3	0	0	0	0.62614	1	2096	2096		41.427	2.1738	1	189990	+		46954	16552	31598	31611	52972	52972					0.030676288749418745
RASPAGKCM	9	Oxidation (M)	_RASPAGKCM(Oxidation (M))_		RASPAGKCM(1)		RASPAGKCM(51)	0	0	1		ENST00000371626.8_1_1:52521183-52521414:-|nuORF	ENST00000371626.8_1_1:52521183-52521414:-|nuORF	ENST00000371626.8_1_1:52521183-52521414:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7239990234375	2	468.723129	935.431706	1.0229	0.00047944	-0.11275	-5.2846E-05	0.91012	0.0004266	468.722942940269	93.238	1.0458	93.679	93.148	94.194	0.44099					53	24	3	0	0	0	0.51307	1	11107	11107		51.335	8.861	1	566820			46955	10669	31599	31612	52973	52973		174			-0.03859258545958255
RASPAGKCM	9	Oxidation (M)	_RASPAGKCM(Oxidation (M))_					0	0	1		ENST00000371626.8_1_1:52521183-52521414:-|nuORF	ENST00000371626.8_1_1:52521183-52521414:-|nuORF	ENST00000371626.8_1_1:52521183-52521414:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	468.723129	935.431706	-0.97481	-0.00045691	1.1024	0.00051671	0.12757	5.9795E-05	468.7235582123549	93.22	0.5882	93.445	93.236	93.824	0.22548	-0.17486	0.00039381	NaN	51.335	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140410			46956	10669	31599	31612				174			-0.03859258545958255
RASPAGKCM	9	Oxidation (M)	_RASPAGKCM(Oxidation (M))_					0	0	1		ENST00000371626.8_1_1:52521183-52521414:-|nuORF	ENST00000371626.8_1_1:52521183-52521414:-|nuORF	ENST00000371626.8_1_1:52521183-52521414:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	468.723129	935.431706	0.70602	0.00033093	-0.38274	-0.0001794	0.32328	0.00015153	468.7227906509745	93.422	0.76205	93.583	93.283	94.045	0.16119	-0.037251	-0.00099841	NaN	51.335	26	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119560			46957	10669	31599	31612				174			-0.03859258545958255
RASPAGKCM	9	Oxidation (M)	_RASPAGKCM(Oxidation (M))_					0	0	1		ENST00000371626.8_1_1:52521183-52521414:-|nuORF	ENST00000371626.8_1_1:52521183-52521414:-|nuORF	ENST00000371626.8_1_1:52521183-52521414:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	468.723129	935.431706	-1.7168	-0.0008047	2.2494	0.0010544	0.53261	0.00024965	468.7239945573696	93.334	0.55356	93.526	93.31	93.863	0.19239	-0.093885	0.0014691	NaN	51.335	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128310			46958	10669	31599	31612				174			-0.03859258545958255
RASPRTRRPAD	11	Unmodified	_RASPRTRRPAD_					0	0	0			REV__ENST00000599588.5_1_19:17337056-17337729:+|nuORF	REV__ENST00000599588.5_1_19:17337056-17337729:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8604125976562	2	641.857983	1281.70141	-0.047502	-3.0489E-05	1.8588	0.0011931	1.8113	0.0011626	642.3607489097492	117.62	0.31653	117.55	117.34	117.65	-0.07531					33	10	4	0	0	0	0.60058	1	12603	12603		44.377	3.599	1	442700	+		46959	17091	31600	31613	52974	52974					0.071831343862641
RASPRTRRPAD	11	Unmodified	_RASPRTRRPAD_					0	0	0			REV__ENST00000599588.5_1_19:17337056-17337729:+|nuORF	REV__ENST00000599588.5_1_19:17337056-17337729:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3613891601562	2	641.857983	1281.70141	1.7061	0.001095	0.85773	0.00055054	2.5638	0.0016456	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.638	1	12974	12974		40.058	6.1365	1	27133000	+		46960	17091	31600	31613	52975	52975					0.071831343862641
RASPSKPASA	10	Unmodified	_RASPSKPASA_					0	0	0		ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	ENSG00000047849|ENST00000683076|MAP4	ENSG00000047849|ENST00000683076|MAP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.26654052734375	2	486.267073	970.519593	-0.087647	-4.262E-05	0.30406	0.00014785	0.21641	0.00010523	486.26710603472304	86.356	4.0954	86.423	85.117	89.212	0.067444					314	95	4	0	0	0	0.80179	1	8904	8904		39.253	3.6345	1	1700900			46961	969	31601	31614	52976	52976					0.03315401640657001
RASPSKPASA	10	Unmodified	_RASPSKPASA_					0	0	0		ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-4|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4	ENSG00000047849|ENST00000683076|MAP4	ENSG00000047849|ENST00000683076|MAP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.266845703125	2	486.267073	970.519593	0.080189	3.8993E-05	-0.13772	-6.6968E-05	-0.057528	-2.7974E-05	486.2668793256364	86.146	4.4086	86.59	84.867	89.275	0.44331					281	107	4	0	0	0	0.67571	1	9980	9980		45.972	0.020292	1	1279400			46962	969	31601	31614	52977	52977					0.03315401640657001
RASRLENGS	9	Unmodified	_RASRLENGS_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.26019287109375	2	495.259779	988.505006	1.1508	0.00056992	-0.61704	-0.0003056	0.53371	0.00026433	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.44421	1	2630	2630		54.776	5.3348	1	3842700			46963	7373	31602	31615	52978	52978					0.010293294925304508
RASSVLHGT	9	Unmodified	_RASSVLHGT_					0	0	0		ENST00000517600.5_1_8:21924352-21927027:+|nuORF;ENST00000523300.5_1_8:21906721-21927027:+|nuORF;ENST00000517804.5_1_8:21914606-21927027:+|nuORF;ENST00000415253.5_1_8:21916870-21927027:+|nuORF	ENST00000517600.5_1_8:21924352-21927027:+|nuORF	ENST00000517600.5_1_8:21924352-21927027:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.253662109375	2	464.253966	926.493378	-0.76573	-0.00035549	0.99904	0.00046381	0.2333	0.00010831	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.64555	1	9694	9694		44.377	6.5657	1	1046600			46964	11376	31603	31616	52979	52979					0.02719132469201213
RATAFIKIT	9	Unmodified	_RATAFIKIT_					0	0	0		ENSG00000135914|ENST00000258400|HTR2B	ENSG00000135914|ENST00000258400|HTR2B	ENSG00000135914|ENST00000258400|HTR2B	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.813232421875	2	510.813659	1019.61277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.33	1	105.49	104.99	105.99	0.15583								0	0	0	0.28009	1	12834	12834		39.253	3.6345	1				46965	4065	31604	31617	52980	52980					0.10374326093892705
RATGRKAL	8	Unmodified	_RATGRKAL_					0	0	0			REV__ENST00000414809.7_1_1:44399451-44399905:+|nuORF	REV__ENST00000414809.7_1_1:44399451-44399905:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7738342285156	2	436.774868	871.535184	-0.35354	-0.00015442	-2.6501	-0.0011575	-3.0037	-0.0013119	436.77386062542524	26.841	0.59137	26.803	26.483	27.075	-0.038525					26	14	2	0	0	0	0.80706	1	1251	1251		19.36	1.0356	1	55158	+		46966	26413	31605	31618	52981	52981					0.0942773294835888
RATGSLALHI	10	Unmodified	_RATGSLALHI_					0	0	0		ENST00000409331.6_1_2:85584191-85584266:+|nuORF	ENST00000409331.6_1_2:85584191-85584266:+|nuORF	ENST00000409331.6_1_2:85584191-85584266:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	518.8108520507812	2	519.806365	1037.59818	0.81787	0.00042513	-0.27374	-0.00014229	0.54413	0.00028284	520.308930266428	100.24	0.57526	100.39	100.16	100.74	0.15073					15	12	2	0	0	0	0.37624	1	10485	10485		39.253	0.44669	1	31672			46967	11304	31606	31619	52982	52982					0.08088253945743418
RATGTAFLLL	10	Unmodified	_RATGTAFLLL_					0	0	0		ENSG00000213906|ENST00000533293|LTB4R2	ENSG00000213906|ENST00000533293|LTB4R2	ENSG00000213906|ENST00000533293|LTB4R2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8172607421875	2	531.818941	1061.62333	-0.7527	-0.0004003	-3.1029	-0.0016502	-3.8556	-0.0020505	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.86763	1	8671	8671		26.693	0	1	2790600			46968	8606	31607	31620	52983	52983					0.09498308748334239
RATKPTVQK	9	Unmodified	_RATKPTVQK_					0	0	0		ENST00000263196.11_1_22:19055732-19076988:-|nuORF	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.814208984375	2	514.81419	1027.61383	0.81769	0.00042096	-1.1947	-0.00061504	-0.377	-0.00019409	514.813579480516	16.607	0.79747	16.12	15.959	16.757	-0.48718					38	17	4	0	0	0	0.0017431	2	160	148;160		143.37	50.178	1	2794600			46969	9455	31608	31621	52984;52985	52985					0.10112540462819197
RATKPTVQK	9	Unmodified	_RATKPTVQK_					0	0	0		ENST00000263196.11_1_22:19055732-19076988:-|nuORF	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.8140869140625	2	514.81419	1027.61383	0.52238	0.00026893	-0.90142	-0.00046406	-0.37904	-0.00019514	514.8137347167254	16.636	0.88589	16.026	15.82	16.706	-0.6107					51	19	5	0	0	0	0.0041213	1	159	159		138.06	39.433	1	3645200			46970	9455	31608	31621	52986	52986					0.10112540462819197
RATKPTVQK	9	Unmodified	_RATKPTVQK_					0	0	0		ENST00000263196.11_1_22:19055732-19076988:-|nuORF	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	514.81419	1027.61383	-1.8425	-0.00094854	3.1078	0.0015999	1.2653	0.00065139	514.8163170477198	16.316	0.11581	16.316	16.28	16.396	0	0.10494	0.0039084	NaN	143.37	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33818			46971	9455	31608	31621							0.10112540462819197
RATKWISL	8	Unmodified	_RATKWISL_					0	0	0			REV__ENST00000409031.5_3_2:130940142-130940265:-|nuORF	REV__ENST00000409031.5_3_2:130940142-130940265:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7906799316406	2	487.792727	973.5709	-0.48923	-0.00023864	-3.7823	-0.001845	-4.2716	-0.0020836	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.93293	1	9721	9721		51.335	4.569	1	1599600	+		46972	26330	31609	31622	52987	52987					0.08305770405377189
RATLLPSEQ	9	Unmodified	_RATLLPSEQ_					0	0	0			REV__ENST00000475937.5_1_3:71542611-71592656:-|nuORF	REV__ENST00000475937.5_1_3:71542611-71592656:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7846984863281	2	507.782556	1013.55056	0.51213	0.00026005	3.9471	0.0020043	4.4593	0.0022643	507.78450159638214	16.833	0.70228	16.345	16.098	16.8	-0.48718					32	15	4	0	0	0	0.73802	1	194	194		37.812	8.662	1	834700	+		46973	27325	31610	31623	52988	52988					0.04432554954905754
RATLSPHLLR	10	Unmodified	_RATLSPHLLR_					0	0	0		ENST00000371753.5_1_9:138900198-138900429:-|nuORF	ENST00000371753.5_1_9:138900198-138900429:-|nuORF	ENST00000371753.5_1_9:138900198-138900429:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.35498046875	2	582.354014	1162.69348	0.75692	0.00044079	-1.142	-0.00066503	-0.38505	-0.00022424	582.3532376593708	103.08	2.584	103.3	103	105.58	0.22556					189	68	3	0	0	0	0.86802	1	12506	12506		27.047	0.3544	1	7736200			46974	10674	31611	31624	52989	52989					0.1186360713677459
RATRAPQPTY	10	Unmodified	_RATRAPQPTY_					0	0	0			REV__ENST00000377067.8_1_13:92051146-92101018:+|nuORF	REV__ENST00000377067.8_1_13:92051146-92101018:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.3189086914062	2	580.812179	1159.60981	0.039054	2.2683E-05	0.40403	0.00023466	0.44308	0.00025735	580.8125705241928	22.609	0.3818	22.55	22.443	22.825	-0.05867					21	13	2	0	0	0	0.82886	1	745	745		37.812	1.3648	1	31331	+		46975	25853	31612	31625	52990	52990					0.03638450969083351
RATRRVIGRL	10	Unmodified	_RATRRVIGRL_					0	0	0			REV__ENST00000367154.5_3_1:205419007-205419058:-|nuORF	REV__ENST00000367154.5_3_1:205419007-205419058:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3893432617188	2	599.38618	1196.75781	0.8242	0.00049401	1.843	0.0011047	2.6672	0.0015987	599.386985798388	15.299	0.1596	15.348	15.245	15.404	0.049079					7	4	2	0	0	0	0.86718	1	33	33		27.882	0	1	37266	+		46976	25553	31613	31626	52991	52991					0.16729807013598474
RATRSACC	8	Unmodified	_RATRSACC_					0	0	0			REV__ENST00000569236.5_1_16:27236480-27252833:-|nuORF	REV__ENST00000569236.5_1_16:27236480-27252833:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77978515625	2	434.199822	866.38509	0.15769	6.8467E-05	1.6787	0.00072889	1.8364	0.00079736	434.20169499425936	44.657	0.21976	44.634	44.569	44.788	-0.023079					6	4	2	0	0	0	0.4196	1	3497	3497		33.516	0	1	32558	+		46977	28910	31614	31627	52992	52992					-0.053446983772460044
RATTLVRGG	9	Unmodified	_RATTLVRGG_					0	0	0			REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7774353027344	2	465.777608	929.540663	-1.2002	-0.00055902	1.1319	0.00052724	-0.068228	-3.1779E-05	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.76255	2	7710	7710;7722		35.618	2.8059	1	683640	+		46978	28205	31615	31628	52993;52994	52993					0.07307411740191583
RATTLVRGG	9	Unmodified	_RATTLVRGG_					0	0	0			REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7775573730469	2	465.777608	929.540663	-0.11871	-5.5291E-05	0.041983	1.9555E-05	-0.076723	-3.5736E-05	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.76255	4	8001	8001;8024;8166;8178		35.618	10.633	1	1083800	+		46979	28205	31615	31628	52995;52996;52997;52998	52995					0.07307411740191583
RATTLVRGG	9	Unmodified	_RATTLVRGG_					0	0	0			REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77740478515625	2	465.777608	929.540663	0.52254	0.00024339	-0.63525	-0.00029589	-0.11271	-5.2499E-05	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.71772	1	8232	8232		39.253	6.4404	1	1330400	+		46980	28205	31615	31628	52999	52999					0.07307411740191583
RATTLVRGG	9	Unmodified	_RATTLVRGG_					0	0	0			REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7777404785156	2	465.777608	929.540663	-0.25577	-0.00011913	0.16818	7.8335E-05	-0.08759	-4.0797E-05	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.78058	1	7902	7902		30.504	3.7075	1	451640	+		46981	28205	31615	31628	53000	53000					0.07307411740191583
RATTLVRGG	9	Unmodified	_RATTLVRGG_					0	0	0			REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7774658203125	2	465.777608	929.540663	-1.0371	-0.00048307	0.85648	0.00039893	-0.18065	-8.4142E-05	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.77244	3	8010	7845;7915;8010		32.812	3.6629	1	1384500	+		46982	28205	31615	31628	53001;53002;53003	53003					0.07307411740191583
RATTLVRGG	9	Unmodified	_RATTLVRGG_					0	0	0			REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77716064453125	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.745	1	80.882	80.382	81.382	0.13702								0	0	0	0.28009	1	7700	7700		39.253	10.103	1		+		46983	28205	31615	31628	53004	53004					0.07307411740191583
RATTLVRGG	9	Unmodified	_RATTLVRGG_					0	0	0			REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7774963378906	2	465.777608	929.540663	0.60386	0.00028126	-0.75167	-0.00035011	-0.14781	-6.8848E-05	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.55097	3	7946	7836;7876;7946		49.442	13.823	1	1082300	+		46984	28205	31615	31628	53005;53006;53007	53007					0.07307411740191583
RATTLVRGG	9	Unmodified	_RATTLVRGG_					0	0	0			REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	REV__ENST00000526338.5_1_8:145582883-145583949:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7773742675781	2	465.777608	929.540663	-0.22002	-0.00010248	0.31699	0.00014765	0.096969	4.5166E-05	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.58668	4	9487	9432;9487;9534;9649		47.657	13.485	1	1042300	+		46985	28205	31615	31628	53008;53009;53010;53011	53009					0.07307411740191583
RATVPVRN	8	Unmodified	_RATVPVRN_					0	0	0			REV__ENST00000370902.7_1_10:99202997-99205519:-|nuORF	REV__ENST00000370902.7_1_10:99202997-99205519:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7724914550781	2	456.772326	911.530098	0.92134	0.00042084	-0.6003	-0.0002742	0.32104	0.00014664	456.77176380852353	89.91	2.1934	89.958	88.794	90.987	0.048164					112	51	4	0	0	0	0.88601	1	9271	9271		34.173	5.023	1	1119200	+		46986	25671	31616	31629	53012	53012					0.07079429085752054
RATVRALWFW	10	Unmodified	_RATVRALWFW_					0	0	0		nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:32002284-32014401:+|nuORF	nc|ENSG00000198089|A8K8P3-4|SFI1	nc|ENSG00000198089|A8K8P3-4|SFI1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.7095031738281	3	435.912013	1304.71421	0.48099	0.00020967	4.4545	0.0019418	4.9355	0.0021514	435.9137965006744	30.97	0.52067	30.974	30.623	31.144	0.0037212					16	11	2	0	0	0	0.37624	1	2086	2086		16.007	0	1	40142			46987	8237	31617	31630	53013	53013					0.07404197516439126
RAVAHLRSQL	10	Unmodified	_RAVAHLRSQL_					0	0	0		nc|ENSG00000197150|Q9NUT2-3|ABCB8;ENSG00000197150|ENST00000358849|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8	nc|ENSG00000197150|Q9NUT2-3|ABCB8	nc|ENSG00000197150|Q9NUT2-3|ABCB8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8427124023438	2	575.843813	1149.67307	0.91732	0.00052823	-2.5477	-0.0014671	-1.6304	-0.00093886	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.8651	1	9641	9641		25.574	2.5316	1	5468500			46988	8141	31618	31631	53014	53014					0.10422436476960684
RAVAHLRSQL	10	Unmodified	_RAVAHLRSQL_					0	0	0		nc|ENSG00000197150|Q9NUT2-3|ABCB8;ENSG00000197150|ENST00000358849|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8	nc|ENSG00000197150|Q9NUT2-3|ABCB8	nc|ENSG00000197150|Q9NUT2-3|ABCB8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.843017578125	2	575.843813	1149.67307	-1.6501	-0.00095021	-0.26578	-0.00015305	-1.9159	-0.0011033	575.8434791868526	90.193	1.8473	90.663	90.18	92.028	0.47068					146	46	4	0	0	0	0.86348	1	10776	10776		31.53	1.0262	1	1810000			46989	8141	31618	31631	53015	53015					0.10422436476960684
RAVAKAGLAS	10	Unmodified	_RAVAKAGLAS_					0	0	0		ENSG00000077420|ENST00000376236|APBB1IP	ENSG00000077420|ENST00000376236|APBB1IP	ENSG00000077420|ENST00000376236|APBB1IP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28759765625	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.86272	1	9874	9874		24.519	0.31644	1	40161000			46990	1381	31619	31632	53016	53016					0.0874858239999412
RAVAKNTTP	9	Unmodified	_RAVAKNTTP_					0	0	0		ENSG00000142330|ENST00000391984|CAPN10	ENSG00000142330|ENST00000391984|CAPN10	ENSG00000142330|ENST00000391984|CAPN10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2773742675781	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.71772	1	10024	10024		39.253	4.1008	1	6350300			46991	4559	31620	31633	53017	53017					0.06031992020314192
RAVAPSIIFFD	11	Unmodified	_RAVAPSIIFFD_					0	0	0		ENSG00000145375|ENST00000274008|SPATA5;nc|ENSG00000145375|Q8NB90-2|AFG2A;ENST00000422835.2_1_4:123844270-124023368:+|nuORF	ENSG00000145375|ENST00000274008|SPATA5	ENSG00000145375|ENST00000274008|SPATA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.3461303710938	2	618.342781	1234.67101	2.5351	0.0015676	2.4621	0.0015224	4.9972	0.00309	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.61369	1	10495	10495		42.864	16.171	1	980120			46992	4767	31621	31634	53018	53018					0.06305962948522392
RAVASINQHLL	11	Unmodified	_RAVASINQHLL_					0	0	0		ENSG00000198838|ENST00000634891|RYR3;nc|ENSG00000198838|Q15413-2|RYR3;nc|ENSG00000198838|Q15413-3|RYR3	ENSG00000198838|ENST00000634891|RYR3	ENSG00000198838|ENST00000634891|RYR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3558349609375	2	611.356754	1220.69895	-1.2523	-0.00076562	0.84173	0.0005146	-0.41059	-0.00025102	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.7144	1	9764	9764		29.17	0	1	16503000			46993	8348	31622	31635	53019	53019					0.09743285928584555
RAVASLSPP	9	Unmodified	_RAVASLSPP_					0	0	0		ENST00000520728.5_1_8:94929214-94934280:+|nuORF;ENST00000297598.4_1_8:94929214-94934336:+|nuORF	ENST00000520728.5_1_8:94929214-94934280:+|nuORF	ENST00000520728.5_1_8:94929214-94934280:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2586975097656	2	449.261259	896.507966	-0.84381	-0.00037909	-0.64993	-0.00029199	-1.4937	-0.00067108	449.2608028150776	70.775	0.66237	70.737	70.497	71.16	-0.037865					52	32	2	0	0	0	0.7932	1	6880	6880		24.203	0	1	207110			46994	9762	31623	31636	53020	53020					0.055572046173210765
RAVATTRDV	9	Unmodified	_RAVATTRDV_					0	0	0			REV__ENSG00000150760|ENST00000623213|DOCK1	REV__ENSG00000150760|ENST00000623213|DOCK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.780517578125	2	494.780348	987.546142	-0.60063	-0.00029718	0.65872	0.00032592	0.05809	2.8742E-05	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.76764	1	8521	8521		34.173	1.3601	1	707910	+		46995	20220	31624	31637	53021	53021					0.051870905319901794
RAVAVKRLL	9	Unmodified	_RAVAVKRLL_					0	0	0		ENST00000562562.1_1_16:23706236-23712034:-|nuORF;ENSG00000134398|ENST00000256797|ERN2	ENST00000562562.1_1_16:23706236-23712034:-|nuORF	ENST00000562562.1_1_16:23706236-23712034:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.318603515625	2	513.350743	1024.68693	-0.012636	-6.4865E-06	-0.27212	-0.00013969	-0.28476	-0.00014618	513.3505662687024	55.877	0.79495	55.867	55.333	56.128	-0.010132					28	21	2	0	0	0	0.20789	1	4925	4925		38.806	1.647	1	65440			46996	3933	31625	31638	53022	53022					0.17557713976088962
RAVAVKRLL	9	Unmodified	_RAVAVKRLL_					0	0	0		ENST00000562562.1_1_16:23706236-23712034:-|nuORF;ENSG00000134398|ENST00000256797|ERN2	ENST00000562562.1_1_16:23706236-23712034:-|nuORF	ENST00000562562.1_1_16:23706236-23712034:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	513.350743	1024.68693	-0.38288	-0.00019655	0.55803	0.00028646	0.17515	8.9911E-05	513.350929337578	56.016	0.41918	56.08	55.888	56.307	0.063725	0.096194	0.00030342	NaN	38.806	29	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80424			46997	3933	31625	31638							0.17557713976088962
RAVAVKRLL	9	Unmodified	_RAVAVKRLL_					0	0	0		ENST00000562562.1_1_16:23706236-23712034:-|nuORF;ENSG00000134398|ENST00000256797|ERN2	ENST00000562562.1_1_16:23706236-23712034:-|nuORF	ENST00000562562.1_1_16:23706236-23712034:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	513.350743	1024.68693	0.3459	0.00017757	-0.25452	-0.00013066	0.091381	4.691E-05	513.3504714979932	55.403	1.5892	55.972	54.733	56.322	0.56836	-0.011777	-0.00053082	NaN	38.806	49	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217610			46998	3933	31625	31638							0.17557713976088962
RAVDEVLR	8	Unmodified	_RAVDEVLR_					0	0	0			REV__nc|ENSG00000155093|Q92932-4|PTPRN2	REV__nc|ENSG00000155093|Q92932-4|PTPRN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2779235839844	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.89494	1	7734	7734		37.159	0	1	1785900	+		46999	20415	31626	31639	53023	53023					0.060319920203255606
RAVDRPLR	8	Unmodified	_RAVDRPLR_					0	0	0			REV__ENSG00000134250|ENST00000256646|NOTCH2;REV__ENST00000361545.9_1_7:73703847-73704045:+|nuORF	REV__ENSG00000134250|ENST00000256646|NOTCH2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79595947265625	2	491.798875	981.583196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.214	1	58.248	57.748	58.748	0.033905								0	0	0	0.29264	1	5331	5331		29.15	2.4566	1		+		47000	19125;25503	31627	31640	53024	53024					0.09166806868404365
RAVDTRVP	8	Unmodified	_RAVDTRVP_					0	0	0			REV__ENST00000357037.5_1_17:40575120-40575375:-|nuORF	REV__ENST00000357037.5_1_17:40575120-40575375:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2640380859375	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.87479	1	8232	8232		30.504	0	1	4814400	+		47001	25402	31628	31641	53025	53025					0.054357228488470355
RAVDTRVP	8	Unmodified	_RAVDTRVP_					0	0	0			REV__ENST00000357037.5_1_17:40575120-40575375:-|nuORF	REV__ENST00000357037.5_1_17:40575120-40575375:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2638854980469	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.90523	1	7527	7527		40.778	6.6056	1	1262800	+		47002	25402	31628	31641	53026	53026					0.054357228488470355
RAVDTRVP	8	Unmodified	_RAVDTRVP_					0	0	0			REV__ENST00000357037.5_1_17:40575120-40575375:-|nuORF	REV__ENST00000357037.5_1_17:40575120-40575375:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2630920410156	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.87479	1	8237	8237		30.504	0	1	4597500	+		47003	25402	31628	31641	53027	53027					0.054357228488470355
RAVESCKR	8	Unmodified	_RAVESCKR_					0	0	0			REV__ENST00000474481.1_1_1:1425808-1431194:+|nuORF	REV__ENST00000474481.1_1_1:1425808-1431194:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.7535400390625	2	474.755818	947.497083	0.92908	0.00044109	-0.4855	-0.00023049	0.44358	0.00021059	474.7557380661556	19.642	0.37585	19.172	18.974	19.35	-0.46967					9	7	2	0	0	0	0.87064	1	544	544		29.15	2.3535	1	45296	+		47004	20693	31629	31642	53028	53028					0.02123478971395798
RAVFHISMI	9	Unmodified	_RAVFHISMI_					0	0	0			REV__ENST00000460265.5_1_5:126171989-126172217:+|nuORF	REV__ENST00000460265.5_1_5:126171989-126172217:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.3008422851562	2	537.299862	1072.58517	0.036797	1.9771E-05	2.0982	0.0011273	2.135	0.0011471	537.3008851187805	50.122	0.82911	50.099	49.811	50.64	-0.02343					51	18	4	0	0	0	0.049188	1	4305	4305		108.09	14.944	1	1029800	+		47005	26999	31630	31643	53029	53029					0.05178099561999261
RAVGPLSR	8	Unmodified	_RAVGPLSR_					0	0	0			REV__ENST00000504941.1_1_5:106762801-107006392:-|nuORF	REV__ENST00000504941.1_1_5:106762801-107006392:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2614440917969	2	428.261594	854.508634	1.4286	0.0006118	-1.267	-0.00054261	0.16155	6.9187E-05	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.87792	1	9664	9664		31.53	2.3803	1	57042000	+		47006	27869	31631	31644	53030	53030					0.0755604405703707
RAVGSPGGAY	10	Unmodified	_RAVGSPGGAY_					0	0	0			REV__nc|ENSG00000146094|Q7L591-3|DOK3	REV__nc|ENSG00000146094|Q7L591-3|DOK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7378234863281	2	467.740691	933.466829	0.17529	8.1989E-05	4.2479	0.0019869	4.4232	0.0020689	467.7424649813079	54.516	0.79655	54.922	54.573	55.369	0.40663					37	18	3	0	0	0	0.54701	1	5545	5545		52.937	3.7259	1	909810	+		47007	19987	31632	31645	53031	53031					-0.0025655642215269836
RAVGTLQTSL	10	Unmodified	_RAVGTLQTSL_					0	0	0			REV__ENSG00000164077|ENST00000296473|MON1A	REV__ENSG00000164077|ENST00000296473|MON1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035278320312	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.86225	1	8727	8727		32.751	2.4328	1	12189000	+		47008	21025	31633	31646	53032	53032					0.07224530363282611
RAVHEKLEKAD	11	Unmodified	_RAVHEKLEKAD_					0	0	0			REV__nc|ENSG00000164403|Q2M3G4-2|SHROOM1	REV__nc|ENSG00000164403|Q2M3G4-2|SHROOM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3615112304688	2	648.356951	1294.69935	-0.033664	-2.1826E-05	-0.99051	-0.00064221	-1.0242	-0.00066403	648.3561672466351	99.16	0.58132	99.16	98.849	99.431	0					24	13	3	0	0	0	0.62614	1	10005	10005		41.427	0.64845	1	275360	+		47009	21079	31634	31647	53033	53033					0.06378660857808427
RAVISELVP	9	Unmodified	_RAVISELVP_					0	0	0			REV__ENSG00000112249|ENST00000369162|ASCC3	REV__ENSG00000112249|ENST00000369162|ASCC3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.3004455566406	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.288	1	59.288	58.788	59.788	0								0	0	0	0.32039	1	5153	5153		44.117	6.3053	1		+		47010	17934	31635	31648	53034	53034					0.08914333339942004
RAVKAILV	8	Unmodified	_RAVKAILV_					0	0	0			REV__ENSG00000086200|ENST00000325324|IPO11	REV__ENSG00000086200|ENST00000325324|IPO11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3002014160156	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.82419	1	7071	7071		13.775	0	1	1702600	+		47011	16908	31636	31649	53035	53035					0.14627262273370434
RAVKAILV	8	Unmodified	_RAVKAILV_					0	0	0			REV__ENSG00000086200|ENST00000325324|IPO11	REV__ENSG00000086200|ENST00000325324|IPO11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3002624511719	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.81724	1	6774	6774		14.664	0	1	1852500	+		47012	16908	31636	31649	53036	53036					0.14627262273370434
RAVKRKDHP	9	Unmodified	_RAVKRKDHP_					0	0	0			REV__ENST00000462243.2_1_1:40318401-40323020:-|nuORF	REV__ENST00000462243.2_1_1:40318401-40323020:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8310546875	2	553.830706	1105.64686	-1.3791	-0.00076379	0.87112	0.00048245	-0.50797	-0.00028133	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.7932	1	10697	10697		26.693	6.6961	1	5911200	+		47013	16338	31637	31650	53037	53037					0.09826167305504896
RAVLETKQ	8	Unmodified	_RAVLETKQ_					0	0	0		ENSG00000117480|ENST00000243167|FAAH;ENST00000484697.5_1_1:46871424-46877830:+|nuORF;ENST00000489366.2_1_1:46871719-46874871:+|nuORF	ENSG00000117480|ENST00000243167|FAAH	ENSG00000117480|ENST00000243167|FAAH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.77911376953125	2	472.779816	943.545079	0.16923	8.0011E-05	-0.20064	-9.486E-05	-0.031408	-1.4849E-05	472.7796320364736	35.339	0.65096	35.284	35.071	35.722	-0.055149					39	21	3	0	0	0	0.90523	1	1845	1845		40.778	7.9657	1	166940			47014	2982	31638	31651	53038	53038					0.07104876163077734
RAVLINNN	8	Unmodified	_RAVLINNN_					0	0	0		ENSG00000134569|ENST00000378623|LRP4	ENSG00000134569|ENST00000378623|LRP4	ENSG00000134569|ENST00000378623|LRP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2630920410156	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.87064	1	8261	8261		29.15	2.3535	1	4597500			47015	3944	31639	31652	53039	53039					0.054357228488470355
RAVLITDR	8	Unmodified	_RAVLITDR_					0	0	0		ENSG00000188419|ENST00000357749|CHM	ENSG00000188419|ENST00000357749|CHM	ENSG00000188419|ENST00000357749|CHM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2879638671875	2	472.287808	942.561064	-1.7052	-0.00080535	2.0866	0.00098547	0.38138	0.00018012	472.2887688366916	99.113	1.9296	99.299	98.808	100.74	0.18582					95	44	3	0	0	0	0.88601	1	10244	10244		34.173	6.2903	1	583920			47016	7928	31640	31653	53040	53040					0.0874858239999412
RAVLLQVYT	9	Unmodified	_RAVLLQVYT_					0	0	0			REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8168334960938	2	531.818941	1061.62333	-0.7527	-0.0004003	-3.1029	-0.0016502	-3.8556	-0.0020505	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.71772	2	8635	8635;8659		39.253	3.6345	1	2790600	+		47017	18653	31641	31654	53041;53042	53041					0.09498308748334239
RAVLLQVYT	9	Unmodified	_RAVLLQVYT_					0	0	0			REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.76255	3	8938	8938;9023;9107		35.618	8.9254	1	4208000	+		47018	18653	31641	31654	53043;53044;53045	53043					0.09498308748334239
RAVLLQVYT	9	Unmodified	_RAVLLQVYT_					0	0	0			REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8167724609375	2	531.818941	1061.62333	-0.04786	-2.5453E-05	-3.9998	-0.0021272	-4.0476	-0.0021526	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.76255	1	8866	8866		35.618	2.8059	1	4916300	+		47019	18653	31641	31654	53046	53046					0.09498308748334239
RAVLLQVYT	9	Unmodified	_RAVLLQVYT_					0	0	0			REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	REV__nc|ENSG00000125637|Q8NDX1-2|PSD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8167114257812	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.76255	2	8736	8736;8829		35.618	4.0885	1	4022300	+		47020	18653	31641	31654	53047;53048	53047					0.09498308748334239
RAVLYLKE	8	Unmodified	_RAVLYLKE_					0	0	0		ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.2983703613281	2	496.300384	990.586216	-0.1906	-9.4597E-05	0.14517	7.2049E-05	-0.045433	-2.2548E-05	496.30026686092117	32.285	0.48824	32.231	31.869	32.357	-0.054337					16	10	2	0	0	0	0.90089	1	1884	1884		39.253	0	1	28209			47021	3139	31642	31655	53049	53049					0.0905463720255284
RAVLYLKE	8	Unmodified	_RAVLYLKE_					0	0	0		ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	496.300384	990.586216	0.15992	7.937E-05	-0.05186	-2.5738E-05	0.10806	5.3632E-05	496.3003099614226	32.034	0.52283	32.045	31.807	32.33	0.010899	-0.092974	-0.00010355	NaN	39.253	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29808			47022	3139	31642	31655							0.0905463720255284
RAVNLLPKVKN	11	Unmodified	_RAVNLLPKVKN_					0	0	0			REV__nc|ENSG00000002079|Q9H6N6|MYH16	REV__nc|ENSG00000002079|Q9H6N6|MYH16	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3794555664062	2	626.398422	1250.78229	-0.053196	-3.3322E-05	-0.61784	-0.00038701	-0.67104	-0.00042034	626.3989551977462	106.33	0.21938	106.33	106.26	106.48	0					6	4	2	0	0	0	0.17779	1	11035	11035		24.519	6.2571	1	80201	+		47023	29665	31643	31656	53050	53050					0.16693022376466615
RAVNRGYVTSL	11	Unmodified	_RAVNRGYVTSL_					0	0	0		nc|ENSG00000273540|Q96MI9|AGBL1;ENSG00000273540|ENST00000614907|AGBL1	nc|ENSG00000273540|Q96MI9|AGBL1	nc|ENSG00000273540|Q96MI9|AGBL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	618.3458862304688	2	618.346386	1234.67822	1.8217	0.0011265	-2.4051	-0.0014872	-0.58333	-0.0003607	618.3447943757376	97.603	2.4577	97.988	96.782	99.24	0.38548					159	59	3	0	0	0	0.74763	1	11689	11689		22.58	0.61977	1	976090			47024	15313	31644	31657	53051	53051					0.0702669554896147
RAVNRITYGGG	11	Unmodified	_RAVNRITYGGG_					0	0	0			REV__chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1	REV__chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3539428710938	2	582.317628	1162.6207	-0.28509	-0.00016602	3.3928	0.0019757	3.1077	0.0018097	582.3194192569573	103.62	0.40474	103.62	103.47	103.88	0					10	9	2	0	0	0	0.17527	1	10623	10623		47.96	17.642	1	302650	+		47025	15869	31645	31658	53052	53052					0.04589853343350114
RAVNRITYGGG	11	Unmodified	_RAVNRITYGGG_					0	0	0			REV__chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1	REV__chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3536987304688	2	582.317628	1162.6207	3.1755	0.0018492	2.2858	0.0013311	5.4614	0.0031803	582.3195514256163	103.52	0.76591	103.47	103.2	103.97	-0.043755					31	18	3	0	0	0	0.16675	1	11378	11378		56.434	15.007	1	544200	+		47026	15869	31645	31658	53053	53053					0.04589853343350114
RAVNRITYGGG	11	Unmodified	_RAVNRITYGGG_					0	0	0			REV__chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1	REV__chr6:113946088-113948979|21|54.57|0.23|7.91|-|2|None,HDAC2|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3541259765625	2	582.317628	1162.6207	-1.347	-0.0007844	2.8085	0.0016354	1.4615	0.00085104	582.3190755760394	103.56	0.15348	103.67	103.54	103.69	0.11494					5	3	2	0	0	0	0.17415	1	10883	10883		41.427	18.847	1	188070	+		47027	15869	31645	31658	53054	53054					0.04589853343350114
RAVPGVLYSA	10	Unmodified	_RAVPGVLYSA_					0	0	0		ENST00000589246.1_1_17:75493182-75494737:+|nuORF	ENST00000589246.1_1_17:75493182-75494737:+|nuORF	ENST00000589246.1_1_17:75493182-75494737:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7938232421875	2	516.795466	1031.57638	-0.047699	-2.465E-05	-4.0302	-0.0020828	-4.0779	-0.0021075	516.793282030647	86.386	2.8071	86.453	84.68	87.487	0.067436					129	64	3	0	0	0	0.86218	1	8778	8778		32.812	2.3088	1	264930			47028	14234	31646	31659	53055	53055					0.061854491971644165
RAVPGVLYSA	10	Unmodified	_RAVPGVLYSA_					0	0	0		ENST00000589246.1_1_17:75493182-75494737:+|nuORF	ENST00000589246.1_1_17:75493182-75494737:+|nuORF	ENST00000589246.1_1_17:75493182-75494737:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7935180664062	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.74274	1	8768	8768		42.396	1.618	1	817800			47029	14234	31646	31659	53056	53056					0.061854491971644165
RAVPGVLYSA	10	Unmodified	_RAVPGVLYSA_					0	0	0		ENST00000589246.1_1_17:75493182-75494737:+|nuORF	ENST00000589246.1_1_17:75493182-75494737:+|nuORF	ENST00000589246.1_1_17:75493182-75494737:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7933959960938	2	516.795466	1031.57638	-1.5008	-0.00077558	-2.6662	-0.0013779	-4.167	-0.0021535	516.7939962444509	86.285	2.6644	86.444	84.762	87.426	0.15851					129	61	3	0	0	0	0.8651	1	8389	8389		25.574	1.0549	1	241060			47030	14234	31646	31659	53057	53057					0.061854491971644165
RAVPGVLYSA	10	Unmodified	_RAVPGVLYSA_					0	0	0		ENST00000589246.1_1_17:75493182-75494737:+|nuORF	ENST00000589246.1_1_17:75493182-75494737:+|nuORF	ENST00000589246.1_1_17:75493182-75494737:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7937622070312	2	516.795466	1031.57638	-1.5587	-0.00080555	-2.3442	-0.0012115	-3.9029	-0.002017	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.86348	1	8755	8755		31.53	5.9558	1	755180			47031	14234	31646	31659	53058	53058					0.061854491971644165
RAVPGVLYSA	10	Unmodified	_RAVPGVLYSA_					0	0	0		ENST00000589246.1_1_17:75493182-75494737:+|nuORF	ENST00000589246.1_1_17:75493182-75494737:+|nuORF	ENST00000589246.1_1_17:75493182-75494737:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7921752929688	2	516.795466	1031.57638	-1.1229	-0.00058032	-2.9464	-0.0015227	-4.0693	-0.002103	516.7939356050468	88.475	2.4458	88.946	87.694	90.139	0.47068					178	59	4	0	0	0	0.86218	1	10339	10339		32.812	1.2826	1	833210			47032	14234	31646	31659	53059	53059					0.061854491971644165
RAVPSRQAGPA	11	Unmodified	_RAVPSRQAGPA_					0	0	0			REV__ENST00000395873.7_3_10:38145437-38146837:-|nuORF	REV__ENST00000395873.7_3_10:38145437-38146837:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.3146362304688	2	555.312346	1108.61014	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.009	1	79.009	78.509	79.509	0								0	0	0	0.56276	1	7251	7251		35.152	3.1972	1		+		47033	26127	31647	31660	53060	53060					0.06017870688947369
RAVPVKRPRV	10	Unmodified	_RAVPVKRPRV_					0	0	0		ENST00000488227.1_1_20:32663701-32663851:+|nuORF;nc|ENSG00000125970|Q9UKM9-2|RALY;ENSG00000125970|ENST00000246194|RALY	ENST00000488227.1_1_20:32663701-32663851:+|nuORF	ENST00000488227.1_1_20:32663701-32663851:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3424682617188	2	589.385648	1176.75674	0.83162	0.00049015	4.0866	0.0024086	4.9183	0.0028987	589.3886737285621	94.303	0.24601	94.466	94.37	94.617	0.16308					6	5	2	0	0	0	0.37624	1	9619	9619		25.574	8.106	1	88922			47034	3433	31648	31661	53061	53061					0.17543592644688033
RAVQGAIGK	9	Unmodified	_RAVQGAIGK_					0	0	0			REV__ENSG00000112541|ENST00000539869|PDE10A	REV__ENSG00000112541|ENST00000539869|PDE10A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2731018066406	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.74721	1	9632	9632		37.159	1.9584	1	26247000	+		47035	17951	31649	31662	53062	53062					0.08152313228526964
RAVQLPFN	8	Unmodified	_RAVQLPFN_					0	0	0			REV__ENST00000513781.5_1_17:46970480-46973128:+|nuORF	REV__ENST00000513781.5_1_17:46970480-46973128:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7668762207031	2	472.769252	943.52395	-1.568	-0.00074129	-2.6998	-0.0012764	-4.2678	-0.0020177	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.87479	1	7975	7975		30.504	0	1	404330	+		47036	20644	31650	31663	53063	53063					0.04992910854230104
RAVRASLTT	9	Unmodified	_RAVRASLTT_					0	0	0			REV__nc|ENSG00000139637|Q9HB07|MYG1	REV__nc|ENSG00000139637|Q9HB07|MYG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7901611328125	2	487.790715	973.566878	0.54992	0.00026825	-0.9209	-0.00044921	-0.37098	-0.00018096	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.58668	1	8193	8193		47.657	7.0847	1	633420	+		47037	19557	31651	31664	53064	53064					0.0790368091164737
RAVRIQVHQ	9	Unmodified	_RAVRIQVHQ_					0	0	0			REV__ENST00000580803.1_1_7:86817463-86822708:+|nuORF	REV__ENST00000580803.1_1_7:86817463-86822708:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8297119140625	2	553.830706	1105.64686	1.198	0.00066348	-2.4064	-0.0013328	-1.2084	-0.00066928	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.76255	1	8943	8943		35.618	5.1146	1	1689700	+		47038	19197	31652	31665	53065	53065					0.09826167305504896
RAVRISSLVAQ	11	Unmodified	_RAVRISSLVAQ_					0	0	0		nc|ENSG00000055118|Q12809-6|KCNH2;ENST00000461280.1_1_7:150646989-150652738:-|nuORF;ENST00000473610.5_1_7:150648470-150652738:-|nuORF;nc|ENSG00000055118|Q12809-2|KCNH2	nc|ENSG00000055118|Q12809-6|KCNH2;nc|ENSG00000055118|Q12809-2|KCNH2	nc|ENSG00000055118|Q12809-6|KCNH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.9145812988281	3	400.578811	1198.7146	3.1807	0.0012741	1.1216	0.00044928	4.3022	0.0017234	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.74002	1	12531	12531		24.276	0.04411	1	88404			47039	12020;14757	31653	31666	53066	53066					0.12319572445653648
RAVRLALDPTP	11	Unmodified	_RAVRLALDPTP_					0	0	0			REV__ENST00000550178.1_1_12:120933958-120934105:+|nuORF	REV__ENST00000550178.1_1_12:120933958-120934105:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747985839844	3	403.575178	1207.70371	-0.15272	-6.1634E-05	-1.1844	-0.00047801	-1.3372	-0.00053965	403.57482141632175	80.779	1.0749	81.306	80.78	81.855	0.52676					103	25	6	0	0	0	0.64964	1	9358	9358		38.714	2.3964	1	21414000	+		47040	28593	31654	31667	53067	53067					0.10816170071348097
RAVRLALDPTP	11	Unmodified	_RAVRLALDPTP_					0	0	0			REV__ENST00000550178.1_1_12:120933958-120934105:+|nuORF	REV__ENST00000550178.1_1_12:120933958-120934105:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57470703125	3	403.575178	1207.70371	-0.098768	-3.986E-05	-1.4245	-0.00057487	-1.5232	-0.00061473	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.69071	1	9538	9538		33.039	0.28887	1	16485000	+		47041	28593	31654	31667	53068	53068					0.10816170071348097
RAVRPLLSRGE	11	Unmodified	_RAVRPLLSRGE_					0	0	0			REV__ENST00000250457.7_1_14:34420017-34420161:-|nuORF	REV__ENST00000250457.7_1_14:34420017-34420161:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3828735351562	2	627.375478	1252.7364	6.5883	0.0041333	4.1804	0.0026227	10.769	0.006756	627.3778538382699	111.82	0.62036	111.85	111.67	112.29	0.032707					64	21	4	0	0	0	0.74763	1	13581	13581		22.58	0.61977	1	10130000	+		47042	24282	31655	31668	53069	53069					0.12014377194213921
RAVRTAPP	8	Unmodified	_RAVRTAPP_					0	0	0		ENST00000341676.9_2_1:17331565-17338402:-|nuORF	ENST00000341676.9_2_1:17331565-17338402:-|nuORF	ENST00000341676.9_2_1:17331565-17338402:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7801513671875	2	434.261594	866.508634	-1.6546	-0.00071854	-0.86066	-0.00037375	-2.5153	-0.0010923	434.26140893387844	39.842	0.56189	39.848	39.712	40.274	0.0065002					15	13	2	0	0	0	0.4196	1	2459	2459		45.952	33.745	1	53153			47043	10251	31656	31669	53070	53070					0.07004044057032388
RAVRVLRLL	9	Unmodified	_RAVRVLRLL_					0	0	0			REV__nc|ENSG00000055118|Q12809-2|KCNH2;REV__nc|ENSG00000173826|Q9H252-3|KCNH6;REV__nc|ENSG00000184611|Q9NS40-2|KCNH7	REV__nc|ENSG00000055118|Q12809-2|KCNH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3761596679688	2	548.377292	1094.74003	-0.93575	-0.00051314	-4.429	-0.0024288	-5.3648	-0.0029419	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.7932	1	2541	2541		23.042	0	1	651720	+		47044	16408;21955;22695	31657	31670	53071	53071					0.19645091758752642
RAVSARLLRGV	11	Unmodified	_RAVSARLLRGV_					0	0	0			REV__nc|ENSG00000165672|P30048-2|PRDX3	REV__nc|ENSG00000165672|P30048-2|PRDX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.38037109375	2	599.380563	1196.74657	0.89992	0.0005394	-1.6462	-0.00098668	-0.74624	-0.00044728	599.379410135585	103.38	3.1227	103.51	103.01	106.14	0.12621					246	78	5	0	0	0	0.7434	1	10886	10886		23.523	2.5758	1	20012000	+		47045	21205	31658	31671	53072	53072					0.15606984919440947
RAVSARLLRGV	11	Unmodified	_RAVSARLLRGV_					0	0	0			REV__nc|ENSG00000165672|P30048-2|PRDX3	REV__nc|ENSG00000165672|P30048-2|PRDX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	599.3775024414062	2	599.380563	1196.74657	2.2233	0.0013326	-1.7579	-0.0010537	0.46535	0.00027892	599.3794612183918	103.02	0.80547	103.24	103.04	103.84	0.22556					35	21	2	0	0	0	0.70737	1	12531	12531		30.318	0	1	2193500	+		47046	21205	31658	31671	53073	53073					0.15606984919440947
RAVSARTLT	9	Unmodified	_RAVSARTLT_					0	0	0			REV__nc|ENSG00000103111|Q7L1V2-2|MON1B	REV__nc|ENSG00000103111|Q7L1V2-2|MON1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.79071044921875	2	487.790715	973.566878	-0.085473	-4.1693E-05	-0.089202	-4.3512E-05	-0.17467	-8.5205E-05	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.64922	1	8542	8542		44.117	13.613	1	1889700	+		47047	17388	31659	31672	53074	53074					0.0790368091164737
RAVSARTLT	9	Unmodified	_RAVSARTLT_					0	0	0			REV__nc|ENSG00000103111|Q7L1V2-2|MON1B	REV__nc|ENSG00000103111|Q7L1V2-2|MON1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7907409667969	2	487.790715	973.566878	-1.5393	-0.00075085	1.3207	0.00064423	-0.21857	-0.00010661	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.78983	1	8055	8055		27.882	3.3782	1	1760400	+		47048	17388	31659	31672	53075	53075					0.0790368091164737
RAVSKNKP	8	Unmodified	_RAVSKNKP_					0	0	0		ENST00000502950.1_1_4:183601480-183676413:+|nuORF;ENSG00000218336|ENST00000511685|TENM3;nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	ENST00000502950.1_1_4:183601480-183676413:+|nuORF;nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2748107910156	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.11	1	116.09	115.59	116.59	-0.02433								0	0	0	0.29596	1	12851	12851		35.618	0.41757	1				47049	14976;8661	31660	31673	53076	53076					0.08152313228515595
RAVSQKPQV	9	Unmodified	_RAVSQKPQV_					0	0	0		chr10:5773941-5783324|14|91.93|0.56|7.35|-|2|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|16	chr10:5773941-5783324|14|91.93|0.56|7.35|-|2|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|16	chr10:5773941-5783324|14|91.93|0.56|7.35|-|2|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.7997131347656	2	506.79854	1011.58253	0.2762	0.00013998	4.2956	0.002177	4.5718	0.002317	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.77244	1	3686	3686		32.812	0	1	416790			47050	77	31661	31674	53077	53077					0.0771996742871579
RAVSSRALA	9	Unmodified	_RAVSSRALA_					0	0	0			REV__ENST00000221452.12_1_19:45541072-45541210:+|nuORF	REV__ENST00000221452.12_1_19:45541072-45541210:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77740478515625	2	465.777608	929.540663	-1.2002	-0.00055902	1.1319	0.00052724	-0.068228	-3.1779E-05	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.76255	1	7633	7633		35.618	7.736	1	683640	+		47051	24159	31662	31675	53078	53078					0.07307411740180214
RAVTRGGGGG	10	Unmodified	_RAVTRGGGGG_					0	0	0			REV__ENST00000607286.5_1_5:473405-473474:+|nuORF	REV__ENST00000607286.5_1_5:473405-473474:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	444.2454833984375	2	444.243932	886.473312	1.4251	0.00063311	2.4607	0.0010932	3.8859	0.0017263	444.24485409277173	107.1	1.0795	107.21	106.82	107.9	0.10396					105	39	3	0	0	0	0.86471	1	13035	13035		30.318	1.1682	1	6005700	+		47052	29384	31663	31676	53079	53079					0.02553381529253329
RAVVEHELKL	10	Unmodified	_RAVVEHELKL_					0	0	0			REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8560791015625	2	597.35368	1192.69281	2.4166	0.0014436	0.49195	0.00029387	2.9086	0.0017374	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.86471	1	9994	9994		30.318	3.6248	1	8047600	+		47053	17226	31664	31677	53080	53080					0.10416767697074647
RAVVEHELKL	10	Unmodified	_RAVVEHELKL_					0	0	0			REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.85546875	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.86218	1	9584	9584		32.812	2.4947	1	18777000	+		47054	17226	31664	31677	53081	53081					0.10416767697074647
RAVVIAFVVC	10	Carbamidomethyl (C)	_RAVVIAFVVC(Carbamidomethyl (C))_	RAVVIAFVVC(1)		RAVVIAFVVC(46)		0	1	0		ENSG00000101188|ENST00000370501|NTSR1	ENSG00000101188|ENST00000370501|NTSR1	ENSG00000101188|ENST00000370501|NTSR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3302001953125	2	567.328619	1132.64269	-0.50942	-0.00028901	3.899	0.002212	3.3896	0.001923	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.67608	1	10858	10858		45.952	14.422	1	5685000			47055	1906	31665	31678	53082	53082	26				0.08166941767581193
RAVVKRLFELL	11	Unmodified	_RAVVKRLFELL_					0	0	0			REV__ENSG00000124143|ENST00000373345|ARHGAP40	REV__ENSG00000124143|ENST00000373345|ARHGAP40	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.6230773925781	3	448.62224	1342.84489	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.212	1	65.337	64.837	65.837	0.12545								0	0	0	0.56276	1	5777	5777		9.2118	0	1		+		47056	18561	31666	31679	53083	53083					0.18718168444661387
RAVVNIFL	8	Unmodified	_RAVVNIFL_					0	0	0		ENSG00000101438|ENST00000217420|SLC32A1	ENSG00000101438|ENST00000217420|SLC32A1	ENSG00000101438|ENST00000217420|SLC32A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.28936767578125	2	466.28982	930.565087	-1.0457	-0.00048758	1.1245	0.00052435	0.078871	3.6777E-05	466.29021591001344	73.859	1.0735	73.986	73.713	74.787	0.1271					83	42	3	0	0	0	0.93529	1	6782	6782		52.299	2.2746	1	958110			47057	1941	31667	31680	53084	53084					0.09702671893705883
RAWAAAAAI	9	Unmodified	_RAWAAAAAI_					0	0	0		ENST00000275517.7_2_11:64846315-64846582:-|nuORF	ENST00000275517.7_2_11:64846315-64846582:-|nuORF	ENST00000275517.7_2_11:64846315-64846582:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7551574707031	2	450.756144	899.497735	-0.14135	-6.3713E-05	-4.1513	-0.0018712	-4.2927	-0.0019349	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.77546	1	7973	7973		31.955	0	1	337080			47058	9596	31668	31681	53085	53085					0.04396641682728841
RAWGRLVR	8	Unmodified	_RAWGRLVR_					0	0	0			REV__ENST00000272937.9_1_2:239147383-239147464:-|nuORF	REV__ENST00000272937.9_1_2:239147383-239147464:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.29052734375	2	507.30941	1012.60427	-0.94934	-0.00048161	-0.8118	-0.00041184	-1.7611	-0.00089344	507.30885530008715	29.626	0.51871	29.597	29.3	29.818	-0.029207					19	11	2	0	0	0	0.4196	1	1893	1893		30.504	0	1	91191	+		47059	24552	31669	31682	53086	53086					0.09846816967933592
RAWKPGRR	8	Unmodified	_RAWKPGRR_					0	0	0		ENST00000567700.5_1_16:1832933-1836988:+|nuORF	ENST00000567700.5_1_16:1832933-1836988:+|nuORF	ENST00000567700.5_1_16:1832933-1836988:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8090209960938	2	513.807034	1025.59952	-0.21927	-0.00011266	3.9089	0.0020084	3.6896	0.0018957	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.85277	1	3876	3876		25.45	1.2474	1	1550000			47060	13951	31670	31683	53087	53087					0.0877393282517005
RAWLAVAL	8	Unmodified	_RAWLAVAL_					0	0	0		ENST00000484352.5_1_2:74757313-74758690:+|nuORF;nc|ENSG00000115317|O43464-4|HTRA2;nc|ENSG00000115317|O43464-2|HTRA2;nc|ENSG00000115317|O43464-3|HTRA2;ENSG00000115317|ENST00000258080|HTRA2	ENST00000484352.5_1_2:74757313-74758690:+|nuORF	ENST00000484352.5_1_2:74757313-74758690:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.75482177734375	2	450.276712	898.538872	-1.2716	-0.00057259	-3.0762	-0.0013852	-4.3479	-0.0019577	450.27524750410043	81.84	2.4417	81.985	80.556	82.998	0.14513					90	57	3	0	0	0	0.4196	1	7765	7765		26.796	2.2921	1	354980			47061	12534	31671	31684	53088	53088					0.08554402722199939
RAWLGPVDLLV	11	Unmodified	_RAWLGPVDLLV_					0	0	0			REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.869140625	2	619.866423	1237.71829	2.311	0.0014325	2.5285	0.0015673	4.8395	0.0029999	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.61369	3	10354	10223;10342;10354		42.864	10.052	1	4854700	+		47062	24091	31672	31685	53089;53090;53091	53091					0.10894242219501393
RAWLGPVDLLV	11	Unmodified	_RAWLGPVDLLV_					0	0	0			REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8695678710938	2	619.866423	1237.71829	0.62565	0.00038782	4.2643	0.0026433	4.8899	0.0030311	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.5603	4	10328	10099;10121;10241;10328		47.657	20.398	1	4779100	+		47063	24091	31672	31685	53092;53093;53094;53095	53095					0.10894242219501393
RAWLGPVDLLV	11	Unmodified	_RAWLGPVDLLV_					0	0	0			REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8700561523438	2	619.866423	1237.71829	1.2649	0.00078404	3.424	0.0021224	4.6888	0.0029065	619.86841143733	93.879	2.9041	94.108	92.241	95.145	0.22863					217	69	4	0	0	0	0.60058	1	9564	9564		44.377	13.874	1	2572300	+		47064	24091	31672	31685	53096	53096					0.10894242219501393
RAWLGPVDLLV	11	Unmodified	_RAWLGPVDLLV_					0	0	0			REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8696899414062	2	619.866423	1237.71829	1.2689	0.00078657	3.6102	0.0022379	4.8792	0.0030244	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.70737	1	9750	9750		30.318	7.7381	1	6493200	+		47065	24091	31672	31685	53097	53097					0.10894242219501393
RAWLGPVDLLV	11	Unmodified	_RAWLGPVDLLV_					0	0	0			REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8690795898438	2	619.866423	1237.71829	0.85836	0.00053207	3.8017	0.0023565	4.66	0.0028886	619.8686410709195	93.975	2.8634	94.136	92.286	95.15	0.16119					249	68	4	0	0	0	0.61369	4	9562	9562;9597;9621;9656		42.864	11.334	1	2724800	+		47066	24091	31672	31685	53098;53099;53100;53101	53098					0.10894242219501393
RAWLGPVDLLV	11	Unmodified	_RAWLGPVDLLV_					0	0	0			REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8695678710938	2	619.866423	1237.71829	0.87763	0.00054401	3.9959	0.0024769	4.8735	0.0030209	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.60058	5	9955	9896;9955;9967;10004;10042		44.377	12.847	1	6574700	+		47067	24091	31672	31685	53102;53103;53104;53105;53106	53103					0.10894242219501393
RAWLGPVDLLV	11	Unmodified	_RAWLGPVDLLV_					0	0	0			REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8692016601562	2	619.866423	1237.71829	1.7162	0.0010638	3.3936	0.0021036	5.1098	0.0031674	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.51007	5	11447	11411;11447;11459;11484;11495		51.193	18.006	1	4719500	+		47068	24091	31672	31685	53107;53108;53109;53110;53111	53108					0.10894242219501393
RAWLGPVDLLV	11	Unmodified	_RAWLGPVDLLV_					0	0	0			REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8689575195312	2	619.866423	1237.71829	0.5439	0.00033715	4.1993	0.002603	4.7432	0.0029401	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.7342	1	11336	11336		25.574	1.0549	1	1280900	+		47069	24091	31672	31685	53112	53112					0.10894242219501393
RAWLGPVDLLV	11	Unmodified	_RAWLGPVDLLV_					0	0	0			REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	REV__ENST00000199320.8_1_5:61699532-61699646:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.869384765625	2	619.866423	1237.71829	1.2588	0.00078029	3.961	0.0024553	5.2198	0.0032356	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.60058	6	11540	11445;11480;11491;11540;11563;11610		44.377	17.414	1	4742500	+		47070	24091	31672	31685	53113;53114;53115;53116;53117;53118	53116					0.10894242219501393
RAWLLLGA	8	Unmodified	_RAWLLLGA_					0	0	0		ENST00000448973.6_1_16:685217-685415:-|nuORF	ENST00000448973.6_1_16:685217-685415:-|nuORF	ENST00000448973.6_1_16:685217-685415:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2742004394531	2	450.276712	898.538872	-1.7762	-0.00079979	-2.6214	-0.0011804	-4.3976	-0.0019801	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.88915	1	12354	12354		35.201	6.9464	1	2494900			47071	11868	31673	31686	53119	53119					0.08554402722222676
RAWMKFRWVLV	11	Unmodified	_RAWMKFRWVLV_					0	0	0		ENST00000526757.5_1_11:8715264-8715453:-|nuORF	ENST00000526757.5_1_11:8715264-8715453:-|nuORF	ENST00000526757.5_1_11:8715264-8715453:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.94989013671875	3	497.951703	1490.83328	0.72177	0.00035941	-2.0064	-0.0009991	-1.2846	-0.00063969	497.9506594640085	23.888	0.82867	23.944	23.607	24.435	0.055487					39	21	3	0	0	0	0.7896	1	825	825		13.508	0	1	87871			47072	13268	31674	31687	53120	53120					0.10749648149635505
RAWQSPVGL	9	Unmodified	_RAWQSPVGL_					0	0	0		ENST00000374831.8_1_6:32938956-32939746:+|nuORF;ENST00000374825.8_1_6:32936812-32939746:+|nuORF;ENST00000580234.1_1_6:32938180-32939746:+|nuORF;ENST00000496118.2_1_6:32937075-32939746:+|nuORF;ENST00000581002.1_1_6:32938681-32939746:+|nuORF	ENST00000374831.8_1_6:32938956-32939746:+|nuORF	ENST00000374831.8_1_6:32938956-32939746:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.79815673828125	2	507.279983	1012.54541	0.016131	8.1829E-06	-0.87728	-0.00044502	-0.86115	-0.00043684	507.27910611422436	53.195	0.67175	53.192	52.842	53.514	-0.0033035					28	18	2	0	0	0	0.20789	1	4609	4609		20.947	0	1	64277			47073	10787	31675	31688	53121	53121					0.03964295882940405
RAYILNLVKQ	10	Unmodified	_RAYILNLVKQ_					0	0	0		ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4;ENST00000461540.2_1_2:62096624-62104153:-|nuORF	ENSG00000115484|ENST00000394440|CCT4	ENSG00000115484|ENST00000394440|CCT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5821228027344	3	406.583674	1216.72919	1.5838	0.00064395	-4.4874	-0.0018245	-2.9037	-0.0011806	406.581775317399	17.31	0.36333	16.828	16.672	17.035	-0.48256					12	7	2	0	0	0	0.66675	1	246	246		46.457	0	1	189270			47074	2848	31676	31689	53122	53122					0.12949644593800258
RAYILNLVKQ	10	Unmodified	_RAYILNLVKQ_					0	0	0		ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4;ENST00000461540.2_1_2:62096624-62104153:-|nuORF	ENSG00000115484|ENST00000394440|CCT4	ENSG00000115484|ENST00000394440|CCT4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	406.583674	1216.72919	0.1552	6.31E-05	-3.2026	-0.0013021	-3.0474	-0.001239	406.58229348870145	17.386	0.35937	16.775	16.613	16.972	-0.6107	-0.02646	0.00066947	NaN	46.457	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165440			47075	2848	31676	31689							0.12949644593800258
RAYNPDMEDDD	11	Unmodified	_RAYNPDMEDDD_					0	0	0			REV__nc|ENSG00000116117|Q8TEW8-6|PARD3B	REV__nc|ENSG00000116117|Q8TEW8-6|PARD3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7612609863281	3	447.50683	1339.49866	-0.070601	-3.1595E-05	1.8892	0.00084544	1.8186	0.00081384	447.84094367956584	23.767	0.24973	23.385	23.199	23.449	-0.38178					7	5	2	0	0	0	0.17835	1	1067	1067		16.53	0	1	40017	+		47076	18178	31677	31690	53123	53123					-0.15751021311825752
RAYRQRLN	8	Unmodified	_RAYRQRLN_					0	0	0			REV__ENSG00000078814|ENST00000262873|MYH7B	REV__ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.8067626953125	2	538.807231	1075.59991	1.2439	0.00067023	-2.2532	-0.001214	-1.0093	-0.00054381	538.8059653540298	90.569	3.7366	90.615	89.222	92.959	0.046448					245	88	4	0	0	0	0.85277	1	9344	9344		25.45	2.4077	1	805100	+		47077	16773	31678	31691	53124	53124					0.06513307754380548
RCAQCQRRTK	10	Unmodified	_RCAQCQRRTK_					0	0	0			REV__nc|ENSG00000144852|O75469-5|NR1I2	REV__nc|ENSG00000144852|O75469-5|NR1I2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.3211669921875	2	625.321865	1248.62918	-0.68478	-0.00042821	-2.4543	-0.0015347	-3.139	-0.0019629	625.3201576946594	64.459	1.2974	64.486	64.064	65.361	0.027138					89	41	4	0	0	0	0.42393	1	6103	6103		62.107	1.9892	1	457250	+		47078	19916	31679	31692	53125	53125					0.014807607166858361
RCDSSRQY	8	Unmodified	_RCDSSRQY_					0	0	0			REV__nc|ENSG00000185621|Q96KR4-2|LMLN	REV__nc|ENSG00000185621|Q96KR4-2|LMLN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2286682128906	2	507.724715	1013.43488	-0.41571	-0.00021106	3.0098	0.0015281	2.594	0.0013171	507.7261271570995	68.048	1.2191	68.012	67.339	68.558	-0.036293					75	45	2	0	0	0	0.90465	1	6562	6562		40.573	1.7665	1	121600	+		47079	22780	31680	31693	53126	53126					-0.07130292167596508
RCEAPPAPNLL	11	Unmodified	_RCEAPPAPNLL_					0	0	0		ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8090209960938	2	590.81079	1179.60703	-0.8677	-0.00051265	-2.4314	-0.0014365	-3.2991	-0.0019492	590.8092605790742	59.99	1.6283	59.99	59.57	61.199	0					167	67	3	0	0	0	0.12325	1	5237	5237		87.696	5.4559	1	3570000			47080	2442	31681	31694	53127	53127					0.024408595199020056
RCEAPPAPNLL	11	Unmodified	_RCEAPPAPNLL_					0	0	0		ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.809326171875	2	590.81079	1179.60703	-0.64683	-0.00038215	-2.809	-0.0016596	-3.4559	-0.0020418	590.8091423509106	59.998	1.5026	59.984	59.286	60.789	-0.013729					96	38	3	0	0	0	0.34641	1	5570	5570		63.534	1.4264	1	6218400			47081	2442	31681	31694	53128	53128					0.024408595199020056
RCERAESLAK	10	Unmodified	_RCERAESLAK_					0	0	0		ENSG00000023608|ENST00000216294|SNAPC1	ENSG00000023608|ENST00000216294|SNAPC1	ENSG00000023608|ENST00000216294|SNAPC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.8032836914062	2	581.803497	1161.59244	0.55662	0.00032384	0.13773	8.0132E-05	0.69435	0.00040397	581.8034623871067	64.587	0.91196	64.711	64.307	65.219	0.12396					103	32	4	0	0	0	0.42897	1	5744	5744		61.691	12.25	1	1348900			47082	861	31682	31695	53129	53129					0.018107873717553957
RCHKNKSI	8	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))HKNKSI_	RC(1)HKNKSI		RC(46)HKNKSI		0	1	0			REV__ENST00000265713.6_2_8:41812916-41832247:-|nuORF	REV__ENST00000265713.6_2_8:41812916-41832247:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.78125	2	521.782367	1041.55018	-0.36396	-0.00018991	-0.81024	-0.00042277	-1.1742	-0.00061267	521.781827522837	48.002	1.084	48.925	48.503	49.587	0.92315					72	26	4	0	0	0	0.91977	1	4652	4652		45.952	6.6991	1	8503600	+		47083	24497	31683	31696	53130	53130	300				0.031068567540614822
RCKFPKHAQH	10	Unmodified	_RCKFPKHAQH_					0	0	0			REV__ENSG00000101493|ENST00000443185|ZNF516	REV__ENSG00000101493|ENST00000443185|ZNF516	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3280029296875	2	626.330016	1250.64548	-0.52598	-0.00032944	-3.2689	-0.0020474	-3.7949	-0.0023769	626.3277375544901	53.044	1.0318	53.02	52.658	53.69	-0.023849					62	25	3	0	0	0	0.8608	1	4710	4710		34.173	5.0025	1	183520	+		47084	17286	31684	31697	53131	53131					0.03018209945093986
RCKTKAEKIS	10	Unmodified	_RCKTKAEKIS_					0	0	0			REV__ENSG00000166317|ENST00000394810|SYNPO2L	REV__ENSG00000166317|ENST00000394810|SYNPO2L	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3324584960938	2	582.33189	1162.64923	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.26	1	110.26	109.76	110.76	0								0	0	0	0.45132	1	11451	11451		24.519	0	1		+		47085	21279	31685	31698	53132	53132					0.0744083492829759
RCLAAHAA	8	Unmodified	_RCLAAHAA_					0	0	0			REV__ENST00000373045.10_1_1:38259590-38259821:+|nuORF	REV__ENST00000373045.10_1_1:38259590-38259821:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2485046386719	2	406.713422	811.412291	1.1618	0.00047251	3.0594	0.0012443	4.2212	0.0017168	406.71325872432584	88.667	0.19787	88.594	88.515	88.712	-0.073112					7	4	2	0	0	0	0.4196	1	9238	9238		4.6817	0	1	16810	+		47086	25742	31686	31699	53133	53133					-0.0009584677457041835
RCLSKLKMF	9	Unmodified	_RCLSKLKMF_					0	0	0		ENSG00000084453|ENST00000683939|SLCO1A2	ENSG00000084453|ENST00000683939|SLCO1A2	ENSG00000084453|ENST00000683939|SLCO1A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	563.3150024414062	2	563.317197	1124.61984	-1.0735	-0.0006047	-0.15824	-8.9141E-05	-1.2317	-0.00069384	563.8174777116847	55.775	1.0022	55.775	55.238	56.24	0					49	27	4	0	0	0	0.7932	1	4803	4803		24.519	1.9395	1	74923			47087	1517	31687	31700	53134	53134					0.06251599378447281
RCPAGFQGE	9	Unmodified	_RCPAGFQGE_					0	0	0		nc|ENSG00000162591|O75095-2|MEGF6;ENSG00000162591|ENST00000356575|MEGF6	nc|ENSG00000162591|O75095-2|MEGF6	nc|ENSG00000162591|O75095-2|MEGF6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.7536315917969	2	482.718901	963.42325	-0.48368	-0.00023348	2.6629	0.0012854	2.1792	0.001052	482.7204480131254	79.991	0.59	80.517	80.105	80.695	0.52676					19	13	2	0	0	0	0.20789	1	9222	9222		30.504	14.03	1	62713			47088	5699	31688	31701	53135	53135					-0.059924891909417966
RCPAGFQGE	9	Unmodified	_RCPAGFQGE_					0	0	0		nc|ENSG00000162591|O75095-2|MEGF6;ENSG00000162591|ENST00000356575|MEGF6	nc|ENSG00000162591|O75095-2|MEGF6	nc|ENSG00000162591|O75095-2|MEGF6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	482.718901	963.42325	0.11174	5.3938E-05	3.2542	0.0015709	3.3659	0.0016248	482.72046012503887	80.18	1.0505	80.597	80.253	81.303	0.41621	0.039583	0.00013195	NaN	16.473	25	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95013			47089	5699	31688	31701							-0.059924891909417966
RCPALKVLRR	10	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))PALKVLRR_	RC(1)PALKVLRR		RC(42)PALKVLRR		0	1	0			REV__ENSG00000070601|ENST00000377765|FRMPD1	REV__ENSG00000070601|ENST00000377765|FRMPD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8931274414062	2	634.890241	1267.76593	-0.0069402	-4.4063E-06	3.4963	0.0022198	3.4894	0.0022154	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.74274	1	11053	11053		42.396	9.5837	1	31286000	+		47090	16605	31689	31702	53136	53136	222				0.142756179386879
RCPALKVLRR	10	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))PALKVLRR_	RC(1)PALKVLRR		RC(42)PALKVLRR		0	1	0			REV__ENSG00000070601|ENST00000377765|FRMPD1	REV__ENSG00000070601|ENST00000377765|FRMPD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.892822265625	2	634.890241	1267.76593	-0.13084	-8.307E-05	3.6766	0.0023343	3.5458	0.0022512	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.74274	1	11541	11541		42.396	12.078	1	40768000	+		47091	16605	31689	31702	53137	53137	222				0.142756179386879
RCPALKVLRR	10	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))PALKVLRR_	RC(1)PALKVLRR		RC(42)PALKVLRR		0	1	0			REV__ENSG00000070601|ENST00000377765|FRMPD1	REV__ENSG00000070601|ENST00000377765|FRMPD1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.893798828125	2	634.890241	1267.76593	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.74	1	107.7	107.2	108.2	-0.042404								0	0	0	0.45132	1	11736	11736		42.396	6.7778	1		+		47092	16605	31689	31702	53138	53138	222				0.142756179386879
RCPVASAHLWQ	11	Unmodified	_RCPVASAHLWQ_					0	0	0		ENST00000377351.8_1_X:47050260-47058480:+|nuORF	ENST00000377351.8_1_X:47050260-47058480:+|nuORF	ENST00000377351.8_1_X:47050260-47058480:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3257446289062	2	634.321857	1266.62916	1.6756	0.0010629	3.7187	0.0023589	5.3943	0.0034217	634.3241495458176	57.188	1.611	57.743	57.355	58.966	0.55512					111	39	4	0	0	0	0.48529	1	5986	5986		52.937	1.6012	1	5227300			47093	10836	31690	31703	53139	53139					0.00651083988350365
RCRRERVVSL	10	Unmodified	_RCRRERVVSL_					0	0	0			REV__ENST00000438877.1_1_6:90385182-90385362:+|nuORF	REV__ENST00000438877.1_1_6:90385182-90385362:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.25494384765625	3	425.247179	1272.71971	1.2071	0.00051333	-2.2847	-0.00097154	-1.0775	-0.00045821	425.246087718688	33.616	0.628	33.921	33.448	34.076	0.30494					16	14	2	0	0	0	0.37624	1	2386	2386		41.08	16.848	1	56123	+		47094	26726	31691	31704	53140	53140					0.09425553036635392
RCRRGGGGL	9	Unmodified	_RCRRGGGGL_					0	0	0		ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2518615722656	2	466.253777	930.493001	-1.3306	-0.0006204	2.0492	0.00095544	0.71858	0.00033504	466.2545972233514	62.853	1.2518	62.881	62.285	63.537	0.028133					98	59	2	0	0	0	0.58151	1	5883	5883		47.916	8.6628	1	139830			47095	12220	31692	31705	53141	53141					0.024974342683549366
RCRRGGGGL	9	Unmodified	_RCRRGGGGL_					0	0	0		ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.25372314453125	2	466.253777	930.493001	-1.0712	-0.00049944	1.1543	0.0005382	0.083122	3.8756E-05	466.2541904327881	60.586	1.2512	60.686	59.935	61.186	0.10082					87	49	2	0	0	0	0.77546	1	5288	5288		31.955	0	1	202870			47096	12220	31692	31705	53142	53142					0.024974342683549366
RCRRGGGGL	9	Unmodified	_RCRRGGGGL_					0	0	0		ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	466.253777	930.493001	0.4265	0.00019886	0.27467	0.00012807	0.70117	0.00032692	466.2537748418339	62.72	1.4283	62.841	62.172	63.6	0.1209	-0.17905	-0.0011397	NaN	47.916	105	67	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	192710			47097	12220	31692	31705							0.024974342683549366
RCRRGGGGL	9	Unmodified	_RCRRGGGGL_					0	0	0		ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	466.253777	930.493001	-0.83251	-0.00038816	1.5276	0.00071227	0.69513	0.00032411	466.25439030354687	62.881	1.2059	62.904	62.293	63.499	0.022984	-0.116	2.8736E-05	NaN	47.916	83	55	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188450			47098	12220	31692	31705							0.024974342683549366
RCRRGGGGL	9	Unmodified	_RCRRGGGGL_					0	0	0		ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	466.253777	930.493001	-1.0877	-0.00050716	1.7368	0.00080978	0.64903	0.00030261	466.25447466176536	62.904	1.2996	63.292	62.534	63.834	0.3878	0.27176	0.00022375	NaN	47.916	44	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91629			47099	12220	31692	31705							0.024974342683549366
RCRRGGGGL	9	Unmodified	_RCRRGGGGL_					0	0	0		ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	ENST00000470375.1_1_2:238499793-238499868:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	466.253777	930.493001	-0.2256	-0.00010518	0.51428	0.00023978	0.28868	0.0001346	466.25394929210245	62.784	1.2477	63.339	62.472	63.72	0.55449	0.31869	-0.00091623	NaN	47.916	48	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113440			47100	12220	31692	31705							0.024974342683549366
RCSKKERVYVY	11	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))SKKERVYVY_	RC(1)SKKERVYVY		RC(41)SKKERVYVY		0	1	0		ENSG00000180424|ENST00000376309|DEFB123	ENSG00000180424|ENST00000376309|DEFB123	ENSG00000180424|ENST00000376309|DEFB123	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.9322814941406	3	496.597766	1486.77147	-1.0113	-0.00050219	1.0101	0.00050161	-0.0011736	-5.8282E-07	496.59795966113825	45.086	0.49007	45.931	45.667	46.157	0.84438					29	11	3	0	0	0	0.62914	1	4198	4198		41.08	19.3	1	771910			47101	7329	31693	31706	53143	53143	91				0.047552519398777804
RCSKKERVYVY	11	Carbamidomethyl (C)	_RC(Carbamidomethyl (C))SKKERVYVY_					0	1	0		ENSG00000180424|ENST00000376309|DEFB123	ENSG00000180424|ENST00000376309|DEFB123	ENSG00000180424|ENST00000376309|DEFB123	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	496.597766	1486.77147	-1.1513	-0.00057173	1.0935	0.00054302	-0.057817	-2.8712E-05	496.59814210113296	45.326	0.65295	45.789	45.47	46.123	0.46313	-0.070638	4.1879E-05	NaN	41.08	40	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	810600			47102	7329	31693	31706			91				0.047552519398777804
RCSRLYGKLD	10	Unmodified	_RCSRLYGKLD_					0	0	0			REV__ENSG00000181409|ENST00000326724|AATK	REV__ENSG00000181409|ENST00000326724|AATK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.1729736328125	2	605.821689	1209.62883	0.98059	0.00059406	2.3829	0.0014436	3.3635	0.0020377	605.8227867255827	54.528	0.67081	54.934	54.699	55.369	0.40663					31	15	3	0	0	0	0.37624	1	5527	5527		22.58	6.1065	1	353090	+		47103	22458	31694	31707	53144	53144					0.0323966426849438
RCVERTQQNGD	11	Unmodified	_RCVERTQQNGD_					0	0	0		ENSG00000152527|ENST00000282406|PLEKHH2;nc|ENSG00000152527|Q8IVE3-2|PLEKHH2	ENSG00000152527|ENST00000282406|PLEKHH2	ENSG00000152527|ENST00000282406|PLEKHH2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.8672180175781	3	435.870325	1304.58915	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.14	1	119.2	118.7	119.7	0.060577								0	0	0	0.56276	1	12513	12513		17.167	0	1				47104	5181	31695	31708	53145	53145					-0.0509650747287651
RCVFTGLSLGQ	11	Unmodified	_RCVFTGLSLGQ_					0	0	0		ENST00000511345.5_1_4:845337-845877:-|nuORF;ENST00000515868.5_1_4:845337-862348:-|nuORF	ENST00000511345.5_1_4:845337-845877:-|nuORF	ENST00000511345.5_1_4:845337-845877:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8092651367188	2	590.81079	1179.60703	0.522	0.0003084	-3.4822	-0.0020574	-2.9603	-0.0017489	590.8087294350913	59.786	1.1886	59.902	59.476	60.664	0.11676					102	40	3	0	0	0	0.32541	1	5146	5146		68.846	0.059317	1	4726100			47105	13017	31696	31709	53146	53146					0.02440859519924743
RCVKKAPIDV	10	Unmodified	_RCVKKAPIDV_					0	0	0			REV__ENST00000469346.1_1_X:46940570-46944097:+|nuORF	REV__ENST00000469346.1_1_X:46940570-46944097:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.8339233398438	2	564.831526	1127.6485	1.0144	0.00057298	2.6433	0.001493	3.6577	0.002066	564.8327976075485	20.351	0.45872	19.892	19.687	20.145	-0.4591					22	9	3	0	0	0	0.86471	1	652	652		30.318	1.1682	1	153650	+		47106	18926	31697	31710	53147	53147					0.08978040279225752
RCWHSSQNACT	11	Unmodified	_RCWHSSQNACT_					0	0	0		ENST00000553932.5_1_14:39306894-39307230:-|nuORF	ENST00000553932.5_1_14:39306894-39307230:-|nuORF	ENST00000553932.5_1_14:39306894-39307230:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	646.7634887695312	2	646.766588	1291.51862	0.65702	0.00042494	-1.3591	-0.00087902	-0.70207	-0.00045408	646.7654771687639	22.302	0.75695	21.884	21.564	22.321	-0.41879					36	16	3	0	0	0	0.72106	1	923	923		28.081	2.5074	1	217980			47107	13711	31698	31711	53148	53148					-0.11547504062195912
RCYDGYTLR	9	Unmodified	_RCYDGYTLR_					0	0	0		CON__Q3KUS7	CON__Q3KUS7	CON__Q3KUS7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.7716064453125	2	573.771665	1145.52878	-0.87205	-0.00050036	0.59005	0.00033856	-0.282	-0.0001618	573.7718634593974	38.027	0.84522	37.999	37.696	38.541	-0.027843					39	19	3	0	0	0	0.28163	1	2552	2552		66.429	8.618	1	317510		+	47108	618	31699	31712	53149	53149					-0.038165730653417995
RCYGKRPGL	9	Unmodified	_RCYGKRPGL_					0	0	0		nc|ENSG00000129566|Q99973-2|TEP1;ENSG00000129566|ENST00000262715|TEP1	nc|ENSG00000129566|Q99973-2|TEP1	nc|ENSG00000129566|Q99973-2|TEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.7877807617188	2	525.287285	1048.56002	0.054286	2.8516E-05	-4.266	-0.0022409	-4.2117	-0.0022123	525.7865411935035	51.661	0.56668	51.659	51.307	51.874	-0.0020447					21	12	2	0	0	0	0.76255	1	4439	4439		35.618	1.4457	1	74027			47109	3595	31700	31713	53150	53150					0.03768044759431177
RDAAEQGEPTH	11	Unmodified	_RDAAEQGEPTH_					0	0	0			REV__nc|ENSG00000198948|O75121-2|MFAP3L	REV__nc|ENSG00000198948|O75121-2|MFAP3L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.7748413085938	2	605.77599	1209.53743	-0.024815	-1.5032E-05	-2.1515	-0.0013033	-2.1763	-0.0013184	605.774462948763	67.085	1.1656	67.636	67.246	68.412	0.55071					63	31	3	0	0	0	0.72739	1	7372	7372		27.047	0.3544	1	2325800	+		47110	23426	31701	31714	53151	53151					-0.05895927895130626
RDAVAVRPG	9	Unmodified	_RDAVAVRPG_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7682800292969	2	470.769783	939.525013	-1.0221	-0.00048115	-0.40497	-0.00019065	-1.427	-0.0006718	470.76946116999153	50.688	1.1627	50.718	50.343	51.506	0.029629					82	35	3	0	0	0	0.28163	1	3969	3969		66.429	7.6473	1	1717600			47111	7421	31702	31715	53152	53152					0.052831252231385406
RDCAWRVVSNL	11	Unmodified	_RDCAWRVVSNL_					0	0	0			REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	REV__nc|ENSG00000164796|Q7Z407-5|CSMD3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.2248229980469	3	440.227673	1317.66119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.861	1	16.861	16.361	17.361	0								0	0	0	0.56276	1	163	163		29.551	6.9892	1		+		47112	21116	31703	31716	53153	53153					0.015064516714801357
RDEELWRQRQ	10	Unmodified	_RDEELWRQRQ_					0	0	0		ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.5774230957031	3	472.576129	1414.70656	-0.46626	-0.00022034	3.073	0.0014522	2.6068	0.0012319	472.57754406341894	33.991	0.98044	33.935	33.697	34.677	-0.056385					36	21	2	0	0	0	0.85259	1	2134	2134		20.03	0.7678	1	149320			47113	5531	31704	31717	53154	53154					0.015793934582234215
RDEKKKLRH	9	Unmodified	_RDEKKKLRH_					0	0	0		ENSG00000198793|ENST00000361445|MTOR	ENSG00000198793|ENST00000361445|MTOR	ENSG00000198793|ENST00000361445|MTOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.24273681640625	3	403.910672	1208.71019	-0.1485	-5.9982E-05	-0.54535	-0.00022027	-0.69386	-0.00028026	403.91028994282544	65.774	1.1316	66.327	66.043	67.174	0.5526					53	30	2	0	0	0	0.73802	1	7199	7199		37.812	2.6595	1	198480			47114	8334	31705	31718	53155	53155					0.11418108022735396
RDGKFGRMG	9	Unmodified	_RDGKFGRMG_					0	0	0			REV__nc|ENSG00000168079|Q6ZMJ2-4|SCARA5	REV__nc|ENSG00000168079|Q6ZMJ2-4|SCARA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.2597045898438	2	512.261268	1022.50798	-0.66054	-0.00033837	-2.5464	-0.0013044	-3.2069	-0.0016428	512.2597390876737	29.456	0.69104	29.427	29.171	29.862	-0.029209					31	15	3	0	0	0	0.64922	1	1857	1857		44.117	4.864	1	222240	+		47115	21460	31706	31719	53156	53156					-0.0023711865430868784
RDGKFGRMG	9	Unmodified	_RDGKFGRMG_					0	0	0			REV__nc|ENSG00000168079|Q6ZMJ2-4|SCARA5	REV__nc|ENSG00000168079|Q6ZMJ2-4|SCARA5	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	512.261268	1022.50798	-0.66054	-0.00033837	-2.5464	-0.0013044	-3.2069	-0.0016428	512.2597390876737	29.456	0.69104	29.427	29.171	29.862	-0.029209	-0.077081	0.00076214	NaN	44.117	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	222240	+		47116	21460	31706	31719							-0.0023711865430868784
RDGNRILD	8	Unmodified	_RDGNRILD_					0	0	0		nc|ENSG00000107593|Q9P0L9-4|PKD2L1;nc|ENSG00000107593|Q9P0L9-3|PKD2L1;nc|ENSG00000107593|Q9P0L9-2|PKD2L1;ENSG00000107593|ENST00000318222|PKD2L1	nc|ENSG00000107593|Q9P0L9-4|PKD2L1	nc|ENSG00000107593|Q9P0L9-4|PKD2L1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2782897949219	2	479.756872	957.499192	-1.6038	-0.00076943	2.3899	0.0011466	0.78607	0.00037712	479.757990409477	85.977	3.9187	86.136	83.938	87.857	0.15851					112	90	2	0	0	0	0.4196	1	8314	8314		34.173	18.531	1	123440			47117	2353	31707	31720	53157	53157					0.018742309808544633
RDGTVRVWKI	10	Unmodified	_RDGTVRVWKI_					0	0	0		ENSG00000114767|ENST00000232888|RRP9	ENSG00000114767|ENST00000232888|RRP9	ENSG00000114767|ENST00000232888|RRP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.3577880859375	2	615.359296	1228.70404	-1.2393	-0.00076262	-1.6685	-0.0010267	-2.9078	-0.0017894	615.3583728067321	104.45	3.3275	104.55	104.1	107.43	0.093857					191	81	4	0	0	0	0.86763	1	11056	11056		26.693	0.62953	1	3359300			47118	2790	31708	31721	53158	53158					0.09883589791229497
RDILQDYTH	9	Unmodified	_RDILQDYTH_					0	0	0		nc|ENSG00000108587|O95249-2|GOSR1;ENSG00000108587|ENST00000451249|GOSR1;nc|ENSG00000108587|O95249|GOSR1;ENST00000467635.6_1_17:28804451-28817236:+|nuORF	nc|ENSG00000108587|O95249-2|GOSR1	nc|ENSG00000108587|O95249-2|GOSR1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.7904052734375	2	580.78837	1159.56219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.504	1	19.43	18.93	19.93	-0.073704								0	0	0	0.31828	1	430	430		24.203	0.68005	1				47119	2420	31709	31722	53159	53159					-0.01121248021786414
RDIMITLL	8	Unmodified	_RDIMITLL_					0	0	0		ENST00000360171.10_2_9:70914784-70914904:+|nuORF	ENST00000360171.10_2_9:70914784-70914904:+|nuORF	ENST00000360171.10_2_9:70914784-70914904:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.77325439453125	2	487.788795	973.563038	-0.70262	-0.00034273	3.8595	0.0018826	3.1569	0.0015399	487.79093784709045	87.169	1.3593	87.363	87.019	88.378	0.19379					66	31	3	0	0	0	0.4196	1	8708	8708		33.516	8.0654	1	241090			47120	10443	31710	31723	53160	53160					0.0751987509358969
RDKDYRRKEIL	11	Unmodified	_RDKDYRRKEIL_					0	0	0		ENSG00000137776|ENST00000380516|SLTM;nc|ENSG00000137776|Q9NWH9-3|SLTM	ENSG00000137776|ENST00000380516|SLTM	ENSG00000137776|ENST00000380516|SLTM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.9510498046875	3	497.951196	1490.83176	-0.077728	-3.8705E-05	-0.01648	-8.2062E-06	-0.094208	-4.6911E-05	497.9511157857349	24.867	0.94643	24.539	24.025	24.972	-0.32825					56	20	4	0	0	0	0.71803	2	1234	1234;1248		28.577	5.8635	1	643250			47121	4234	31711	31724	53161;53162	53161					0.1059768559459826
RDKKLLNKPK	10	Unmodified	_RDKKLLNKPK_					0	0	0			REV__ENSG00000168875|ENST00000306087|SOX14	REV__ENSG00000168875|ENST00000306087|SOX14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.9328308105469	3	413.934706	1238.78229	-1.1382	-0.00047114	-3.9325	-0.0016278	-5.0707	-0.002099	413.9330056480743	43.336	2.2043	43.3	41.98	44.184	-0.03582					131	52	3	0	0	0	0.86207	1	3344	3344		24.232	0.85391	1	471060	+		47122	21529	31712	31725	53163	53163					0.1724502237645993
RDLGRVVSS	9	Unmodified	_RDLGRVVSS_					0	0	0			REV__ENST00000379026.6_1_19:36133589-36134644:+|nuORF	REV__ENST00000379026.6_1_19:36133589-36134644:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7803955078125	2	494.780348	987.546142	-0.074951	-3.7084E-05	0.21159	0.00010469	0.13664	6.7607E-05	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.77244	1	8587	8587		32.812	0.85756	1	651380	+		47123	25909	31713	31726	53164	53164					0.05187090532001548
RDLHSMIV	8	Unmodified	_RDLHSMIV_					0	0	0		nc|ENSG00000170471|Q86X10-2|RALGAPB;nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;ENST00000461423.1_1_20:37137783-37175090:+|nuORF;nc|ENSG00000170471|Q86X10-4|RALGAPB;ENST00000298281.8_1_11:82878493-82879556:+|nuORF	nc|ENSG00000170471|Q86X10-2|RALGAPB	nc|ENSG00000170471|Q86X10-2|RALGAPB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2850036621094	2	485.760569	969.506586	0.075867	3.6853E-05	0.99901	0.00048528	1.0749	0.00052213	485.76204922859796	51.39	0.12354	51.825	51.74	51.864	0.43505					4	2	2	0	0	0	0.4196	1	5091	5091		15.642	1.8665	1	38160			47124	6595	31714	31727	53165	53165					0.020612472569268903
RDLKPQSK	8	Unmodified	_RDLKPQSK_					0	0	0			REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000197283|Q96PV0-3|SYNGAP1;REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.2665710449219	2	486.285266	970.555979	1.2069	0.00058689	-2.2338	-0.0010863	-1.027	-0.00049939	486.2837654787102	88.088	1.2056	88.014	87.466	88.672	-0.074005					59	28	3	0	0	0	0.4196	1	9110	9110		40.778	3.6191	1	87216	+		47125	19340;23216;27400	31715	31728	53166	53166					0.06952278537369239
RDLKQQLLLLN	11	Unmodified	_RDLKQQLLLLN_					0	0	0		ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-5|SYNE1;nc|ENSG00000131018|Q8NF91-6|SYNE1;nc|ENSG00000131018|Q8NF91-10|SYNE1;ENST00000461872.6_1_6:152697909-152949466:-|nuORF	ENSG00000131018|ENST00000367255|SYNE1	ENSG00000131018|ENST00000367255|SYNE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.27789306640625	3	451.945271	1352.81398	-1.6861	-0.00076203	-2.8168	-0.0012731	-4.5029	-0.0020351	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.77511	1	4341	4341		16.53	5.0752	1	792670			47126	3707	31716	31729	53167	53167					0.15168970339777843
RDLMNLCIY	9	Unmodified	_RDLMNLCIY_					0	0	0		nc|ENSG00000196440|Q5H9R4-3|ARMCX4	nc|ENSG00000196440|Q5H9R4-3|ARMCX4	nc|ENSG00000196440|Q5H9R4-3|ARMCX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.779296875	2	570.780644	1139.54674	-0.36907	-0.00021066	-0.27559	-0.0001573	-0.64466	-0.00036796	570.7803128361679	24.518	0.87242	24.574	24.135	25.007	0.055485					44	22	3	0	0	0	0.58151	1	898	898		47.916	13.743	1	98944			47127	15183	31717	31730	53168	53168					-0.017455741348385345
RDLSSGFSK	9	Unmodified	_RDLSSGFSK_					0	0	0		ENSG00000241322|ENST00000395906|FBXW10B;nc|ENSG00000171931|Q5XX13-3|FBXW10;nc|ENSG00000171931|Q5XX13-4|FBXW10;ENSG00000171931|ENST00000395665|FBXW10;nc|ENSG00000171931|Q5XX13-2|FBXW10;ENST00000574478.1_1_17:18651366-18682393:+|nuORF	ENSG00000241322|ENST00000395906|FBXW10B	ENSG00000241322|ENST00000395906|FBXW10B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.7597961425781	2	498.759081	995.503609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.899	1	28.859	28.359	29.359	-0.039907								0	0	0	0.31016	1	1488	1488		27.047	1.4733	1				47128	6724	31718	31731	53169	53169					0.005676954037653559
RDLTTQIVN	9	Unmodified	_RDLTTQIVN_					0	0	0		ENSG00000163885|ENST00000352312|CFAP100;nc|ENSG00000163885|Q494V2-2|CFAP100	ENSG00000163885|ENST00000352312|CFAP100	ENSG00000163885|ENST00000352312|CFAP100	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2935791015625	2	530.293288	1058.57202	2.0317	0.0010774	-1.9029	-0.0010091	0.12876	6.828E-05	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.51592	1	9565	9565		51.193	5.2204	1	1811300			47129	5878	31719	31732	53170	53170					0.04507939983614051
RDNRTQCPFFF	11	Unmodified	_RDNRTQCPFFF_					0	0	0		ENST00000609579.1_1_10:52384849-52386526:+|nuORF	ENST00000609579.1_1_10:52384849-52386526:+|nuORF	ENST00000609579.1_1_10:52384849-52386526:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.55328369140625	3	477.559311	1429.6561	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.108	1	20.087	19.587	20.587	-0.020922								0	0	0	0.56276	1	462	462		22.562	4.7284	1				47130	14485	31720	31733	53171	53171					-0.04153852191166152
RDPCAPGAAY	10	Carbamidomethyl (C)	_RDPC(Carbamidomethyl (C))APGAAY_	RDPC(1)APGAAY		RDPC(69)APGAAY		0	1	0		ENST00000396987.7_1_8:41478532-41478793:+|nuORF	ENST00000396987.7_1_8:41478532-41478793:+|nuORF	ENST00000396987.7_1_8:41478532-41478793:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.2421875	2	539.242741	1076.47093	0.01069	5.7646E-06	-0.79089	-0.00042648	-0.7802	-0.00042072	539.2422023240468	61.908	0.64518	62.016	61.631	62.276	0.10743					51	28	3	0	0	0	0.344	1	5372	5372		68.787	8.4929	1	504150			47131	11130	31721	31734	53172	53172	143				-0.06424834990775707
RDQDEPVEWET	11	Unmodified	_RDQDEPVEWET_					0	0	0		nc|ENSG00000068028|Q9NS23-9|RASSF1;nc|ENSG00000068028|Q9NS23-4|RASSF1	nc|ENSG00000068028|Q9NS23-9|RASSF1	nc|ENSG00000068028|Q9NS23-9|RASSF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.56512451171875	3	468.540639	1402.60009	-0.73902	-0.00034626	-0.93702	-0.00043903	-1.676	-0.00078529	468.5400888203723	53.496	0.16584	54.11	54.028	54.194	0.61436					6	3	2	0	0	0	0.16543	1	5430	5430		49.466	3.5577	1	41744			47132	14769	31722	31735	53173	53173					-0.0851082661761211
RDRERWRERKR	11	Unmodified	_RDRERWRERKR_					0	0	0		L1MEd_dup12611|chrX:628376-628706:-|1.6308868218908503|0.0104924427382037|7.28|52.0|3|2|sense;L1MEd_dup12611|chrX:628376-628706:-|1.6308868218908503|0.0104924427382037|7.28|52.0|1|1|sense	L1MEd_dup12611|chrX:628376-628706:-|1.6308868218908503|0.0104924427382037|7.28|52.0|3|2|sense	L1MEd_dup12611|chrX:628376-628706:-|1.6308868218908503|0.0104924427382037|7.28|52.0|3|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.58416748046875	4	411.483185	1641.90364	2.5772	0.0010605	0.077946	3.2073E-05	2.6551	0.0010925	411.4832079590446	25.806	0.88857	25.374	24.983	25.871	-0.4311					45	20	3	0	0	0	0.18372	1	1322	1322		1.4188	0	1	122990			47133	14603	31723	31736	53174	53174					0.10836037791659692
RDRGLAAKLVL	11	Unmodified	_RDRGLAAKLVL_					0	0	0			REV__ENST00000252674.8_2_19:6212687-6212918:-|nuORF	REV__ENST00000252674.8_2_19:6212687-6212918:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.5892028808594	3	404.59094	1210.75099	-1.3096	-0.00052987	-2.8286	-0.0011444	-4.1383	-0.0016743	404.5896495246431	39.318	1.9056	39.271	38.511	40.416	-0.047005					116	44	4	0	0	0	0.75121	1	2800	2800		21.78	0.94327	1	380940	+		47134	24294	31724	31737	53175	53175					0.15404449342349835
RDRGLAAKLVL	11	Unmodified	_RDRGLAAKLVL_					0	0	0			REV__ENST00000252674.8_2_19:6212687-6212918:-|nuORF	REV__ENST00000252674.8_2_19:6212687-6212918:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.58892822265625	3	404.59094	1210.75099	-0.19379	-7.8407E-05	-4.1135	-0.0016643	-4.3073	-0.0017427	404.5891664662758	39.222	1.192	39.169	38.578	39.77	-0.052727					84	33	3	0	0	0	0.74405	1	2375	2375		23.378	1.6922	1	333770	+		47135	24294	31724	31737	53176	53176					0.15404449342349835
RDRHTKHIPT	10	Unmodified	_RDRHTKHIPT_					0	0	0			REV__ENST00000537498.1_1_16:89114163-89119334:-|nuORF	REV__ENST00000537498.1_1_16:89114163-89119334:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	630.8490600585938	2	630.849627	1259.6847	-1.1888	-0.00074997	0.97459	0.00061482	-0.21423	-0.00013515	630.8500523700144	110.47	0.76814	110.46	110.16	110.92	-0.0074387					58	23	5	0	0	0	0.86218	2	11762	11762;11772		32.812	3.3631	1	2040200	+		47136	28422	31725	31738	53177;53178	53177					0.06524633500316668
RDRLFNAV	8	Unmodified	_RDRLFNAV_					0	0	0		ENSG00000187688|ENST00000338560|TRPV2	ENSG00000187688|ENST00000338560|TRPV2	ENSG00000187688|ENST00000338560|TRPV2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.79302978515625	2	495.777608	989.540663	0.54634	0.00027086	-1.9609	-0.00097217	-1.4146	-0.0007013	495.77649954629334	26.467	0.32429	26.513	26.257	26.582	0.045507					11	7	2	0	0	0	0.4196	1	1127	1127		31.955	5.1588	1	19941			47137	7870	31726	31739	53179	53179					0.045474117401681724
RDRPTLSL	8	Unmodified	_RDRPTLSL_					0	0	0		ENST00000372677.7_1_X:102564842-102565956:-|nuORF	ENST00000372677.7_1_X:102564842-102565956:-|nuORF	ENST00000372677.7_1_X:102564842-102565956:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2778625488281	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.91472	1	8600	8600		44.117	0	1	7438100			47138	10710	31727	31740	53180	53180					0.06031992020336929
RDRQGAHE	8	Unmodified	_RDRQGAHE_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7378845214844	2	484.736471	967.45839	-0.098392	-4.7694E-05	-0.97317	-0.00047173	-1.0716	-0.00051942	484.7360154148434	80.446	0.58928	80.868	80.637	81.227	0.4215					33	13	4	0	0	0	0.92457	1	9234	9234		47.916	0	1	504100	+		47139	18360	31728	31741	53181	53181					-0.02664110338764658
RDRRPRLKFHS	11	Unmodified	_RDRRPRLKFHS_					0	0	0		ENST00000575714.5_1_16:4407825-4408182:-|nuORF;ENST00000574849.1_1_16:4407825-4408472:-|nuORF	ENST00000575714.5_1_16:4407825-4408182:-|nuORF	ENST00000575714.5_1_16:4407825-4408182:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.9541320800781	3	489.951642	1466.8331	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.469	1	62.59	62.09	63.09	0.1209								0	0	0	0.56276	1	5447	5447		27.644	3.4121	1				47140	14037	31729	31742	53182	53182					0.11835364473995469
RDRYRRRN	8	Unmodified	_RDRYRRRN_					0	0	0		ENST00000553902.5_1_14:23375339-23380574:-|nuORF;ENST00000556687.5_1_14:23375339-23380602:-|nuORF;ENST00000554955.5_1_14:23375339-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-3|RBM23;ENST00000557667.5_1_14:23373372-23380602:-|nuORF;nc|ENSG00000100461|Q86U06-4|RBM23;nc|ENSG00000100461|Q86U06-2|RBM23;ENSG00000100461|ENST00000359890|RBM23	ENST00000553902.5_1_14:23375339-23380574:-|nuORF	ENST00000553902.5_1_14:23375339-23380574:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3323364257812	2	596.331936	1190.64932	0.54724	0.00032634	1.2161	0.00072523	1.7634	0.0010516	596.3325172883492	95.985	3.4694	96.39	95.216	98.686	0.40451					232	84	4	0	0	0	0.87479	1	11642	11642		30.504	0	1	1225200			47141	1840	31730	31743	53183	53183					0.06162015763175077
RDSIGLLLLLT	11	Unmodified	_RDSIGLLLLLT_					0	0	0			REV__nc|ENSG00000189099|Q7RTY5-3|PRSS48	REV__nc|ENSG00000189099|Q7RTY5-3|PRSS48	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2076721191406	3	405.255334	1212.74417	0.43733	0.00017723	-1.5273	-0.00061894	-1.0899	-0.00044171	405.58968039961707	28.124	0.20998	28.027	27.974	28.184	-0.096947					5	4	2	0	0	0	0.17521	1	1679	1679		12.433	0	1	25432	+		47142	30119	31731	31744	53184	53184					0.14631091671139984
RDSTPVPL	8	Unmodified	_RDSTPVPL_					0	0	0			REV__ENST00000372722.7_1_20:44037543-44038777:+|nuORF	REV__ENST00000372722.7_1_20:44037543-44038777:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.74481201171875	2	442.745442	883.476331	0.39735	0.00017592	-1.8334	-0.00081175	-1.4361	-0.00063583	442.74450802650625	89.278	0.7365	89.729	89.448	90.184	0.45058					60	17	4	0	0	0	0.884	1	10531	10531		33.516	7.9415	1	3535200	+		47143	23848	31732	31745	53185	53185					0.029932118633610116
RDTPRSPSW	9	Unmodified	_RDTPRSPSW_					0	0	0		ENST00000263212.9_2_22:22277201-22277426:-|nuORF	ENST00000263212.9_2_22:22277201-22277426:-|nuORF	ENST00000263212.9_2_22:22277201-22277426:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.275146484375	2	551.275429	1100.53631	0.32503	0.00017918	-0.37436	-0.00020638	-0.04933	-2.7194E-05	551.2751109394707	27.083	1.2037	27.045	26.676	27.88	-0.038523					78	29	4	0	0	0	0.25483	1	1277	1277		68.787	3.6296	1	656180			47144	9456	31733	31746	53186	53186					-0.009940974733808616
RDVAKIAATT	10	Unmodified	_RDVAKIAATT_					0	0	0		ENST00000592939.1_1_17:76105130-76105382:-|nuORF;ENST00000589217.1_1_17:76103713-76105382:-|nuORF	ENST00000592939.1_1_17:76105130-76105382:-|nuORF	ENST00000592939.1_1_17:76105130-76105382:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3040161132812	2	523.303655	1044.59276	-0.041393	-2.1661E-05	-0.20594	-0.00010777	-0.24734	-0.00012943	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.83456	1	8592	8592		37.508	5.9784	1	3850300			47145	14232	31734	31747	53187	53187					0.07224530363259873
RDVAKIAATT	10	Unmodified	_RDVAKIAATT_					0	0	0		ENST00000592939.1_1_17:76105130-76105382:-|nuORF;ENST00000589217.1_1_17:76103713-76105382:-|nuORF	ENST00000592939.1_1_17:76105130-76105382:-|nuORF	ENST00000592939.1_1_17:76105130-76105382:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3038940429688	2	523.303655	1044.59276	-1.5391	-0.00080541	1.6494	0.00086314	0.11031	5.7726E-05	523.3043931360254	91.382	2.3991	91.563	91.237	93.636	0.18029					145	56	4	0	0	0	0.86047	1	9223	9223		23.523	0.94304	1	1040100			47146	14232	31734	31747	53188	53188					0.07224530363259873
RDVAKQLHKI	10	Unmodified	_RDVAKQLHKI_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.366455078125	2	604.367121	1206.71969	-0.16822	-0.00010167	-0.91026	-0.00055013	-1.0785	-0.0006518	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.86471	1	10752	10752		30.318	4.2543	1	47715000	+		47147	20267	31735	31748	53189	53189					0.12459876308253115
RDVAKQLHKI	10	Unmodified	_RDVAKQLHKI_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3662719726562	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.86218	1	11331	11331		32.812	0.061884	1	63350000	+		47148	20267	31735	31748	53190	53190					0.12459876308253115
RDVAKQLHKI	10	Unmodified	_RDVAKQLHKI_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3666381835938	2	604.367121	1206.71969	3.2045	0.0019367	-4.3338	-0.0026192	-1.1294	-0.00068255	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.86218	1	11618	11618		32.812	0.061884	1	63446000	+		47149	20267	31735	31748	53191	53191					0.12459876308253115
RDVAKQLHKI	10	Unmodified	_RDVAKQLHKI_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3662109375	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.82886	1	11369	11369		37.812	2.6595	1	64334000	+		47150	20267	31735	31748	53192	53192					0.12459876308253115
RDVAKQLHKI	10	Unmodified	_RDVAKQLHKI_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3661499023438	2	604.367121	1206.71969	0.90473	0.00054679	-2.0534	-0.001241	-1.1487	-0.00069423	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.86763	1	11400	11400		26.693	0	1	105740000	+		47151	20267	31735	31748	53193	53193					0.12459876308253115
RDVAKQLHKI	10	Unmodified	_RDVAKQLHKI_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3670043945312	2	604.367121	1206.71969	-1.2751	-0.0007706	0.20453	0.00012361	-1.0705	-0.00064699	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.86218	1	11144	11144		32.812	3.6424	1	103250000	+		47152	20267	31735	31748	53194	53194					0.12459876308253115
RDVAKQLHKI	10	Unmodified	_RDVAKQLHKI_					0	0	0			REV__ENSG00000151746|ENST00000652176|BICD1	REV__ENSG00000151746|ENST00000652176|BICD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3670043945312	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.86047	1	12630	12630		23.523	0.48021	1	3346600	+		47153	20267	31735	31748	53195	53195					0.12459876308253115
RDVILNLYFL	10	Unmodified	_RDVILNLYFL_					0	0	0		ENST00000533739.1_1_11:89951170-89956122:-|nuORF	ENST00000533739.1_1_11:89951170-89956122:-|nuORF	ENST00000533739.1_1_11:89951170-89956122:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3673095703125	2	633.366256	1264.71796	1.4675	0.00092945	2.9702	0.0018813	4.4377	0.0028107	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.86549	1	9655	9655		24.519	0	1	5460600			47154	13401	31736	31749	53196	53196					0.0961882249964674
RDVILNLYFL	10	Unmodified	_RDVILNLYFL_					0	0	0		ENST00000533739.1_1_11:89951170-89956122:-|nuORF	ENST00000533739.1_1_11:89951170-89956122:-|nuORF	ENST00000533739.1_1_11:89951170-89956122:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.36865234375	2	633.366256	1264.71796	1.5977	0.0010119	2.9361	0.0018596	4.5338	0.0028716	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.86089	1	11609	11609		29.17	0	1	10012000			47155	13401	31736	31749	53197	53197					0.0961882249964674
RDVILNLYFL	10	Unmodified	_RDVILNLYFL_					0	0	0		ENST00000533739.1_1_11:89951170-89956122:-|nuORF	ENST00000533739.1_1_11:89951170-89956122:-|nuORF	ENST00000533739.1_1_11:89951170-89956122:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3687744140625	2	633.366256	1264.71796	1.5936	0.0010093	3.1239	0.0019786	4.7175	0.0029879	633.3681450827713	95.612	2.2846	96.032	94.734	97.018	0.41963					200	55	4	0	0	0	0.86195	1	11355	11355		28.081	0	1	3838500			47156	13401	31736	31749	53198	53198					0.0961882249964674
RDVIRHITVV	10	Unmodified	_RDVIRHITVV_					0	0	0		ENSG00000048405|ENST00000265827|ZNF800	ENSG00000048405|ENST00000265827|ZNF800	ENSG00000048405|ENST00000265827|ZNF800	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3684692382812	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.03	1	119.01	118.51	119.51	-0.024033								0	0	0	0.45132	1	13188	13188		19.104	0	1				47157	974	31737	31750	53199	53199					0.12459876308230378
RDVKGQIK	8	Unmodified	_RDVKGQIK_					0	0	0		nc|ENSG00000289750|Q9H1K0-2|RBSN;ENST00000449964.6_1_3:15122283-15137627:-|nuORF;ENSG00000131381|ENST00000253699|RBSN	nc|ENSG00000289750|Q9H1K0-2|RBSN	nc|ENSG00000289750|Q9H1K0-2|RBSN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2887268066406	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.86791	1	12612	12612		28.254	0	1	3080300			47158	3728	31738	31751	53200	53200					0.0874858239999412
RDVKLAANA	9	Unmodified	_RDVKLAANA_					0	0	0			REV__CON__P13717	REV__CON__P13717	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2781982421875	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.78124	1	7752	7752		30.318	3.6248	1	1802300	+	+	47159	15983	31739	31752	53201	53201					0.06031992020314192
RDVMWENY	8	Unmodified	_RDVMWENY_					0	0	0		ENSG00000142065|ENST00000270001|ZFP14	ENSG00000142065|ENST00000270001|ZFP14	ENSG00000142065|ENST00000270001|ZFP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	557.2456665039062	2	556.745116	1111.47568	0.90574	0.00050427	2.4347	0.0013555	3.3405	0.0018598	556.7463950646656	21.837	0.65516	21.394	21.107	21.762	-0.44324					23	14	2	0	0	0	0.88601	1	860	860		34.173	2.6427	1	139690			47160	4540	31740	31753	53202	53202					-0.07559950847962682
RDVSRYLRL	9	Unmodified	_RDVSRYLRL_					0	0	0		ENSG00000115073|ENST00000289228|ACTR1B	ENSG00000115073|ENST00000289228|ACTR1B	ENSG00000115073|ENST00000289228|ACTR1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3431396484375	2	589.343646	1176.67274	2.472	0.0014569	-3.7901	-0.0022337	-1.3181	-0.00077681	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.78124	1	10218	10218		30.318	5.7985	1	16740000			47161	2810	31741	31754	53203	53203					0.09147016757128767
RDVSVRQRAV	10	Unmodified	_RDVSVRQRAV_					0	0	0		nc|ENSG00000183020|O94973-3|AP2A2;ENSG00000183020|ENST00000448903|AP2A2;nc|ENSG00000183020|O94973-2|AP2A2;ENST00000524952.2_1_11:985541-988707:+|nuORF	nc|ENSG00000183020|O94973-3|AP2A2	nc|ENSG00000183020|O94973-3|AP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.3444213867188	2	593.344178	1184.6738	-0.64573	-0.00038314	1.086	0.00064436	0.44025	0.00026122	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.86763	1	11187	11187		26.693	0	1	2296600			47162	7493	31742	31755	53204	53204					0.08885231126032522
RDVVGKVVF	9	Unmodified	_RDVVGKVVF_					0	0	0			REV__ENSG00000148158|ENST00000374232|SNX30	REV__ENSG00000148158|ENST00000374232|SNX30	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.80352783203125	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.77244	1	8501	8501		32.812	3.6629	1	2989000	+		47163	20100	31743	31756	53205	53205					0.08902039576855714
RDWPAPSEEK	10	Unmodified	_RDWPAPSEEK_					0	0	0			REV__nc|ENSG00000186818|Q8NHJ6-2|LILRB4	REV__nc|ENSG00000186818|Q8NHJ6-2|LILRB4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.5527038574219	3	405.531527	1213.57275	0.62564	0.00025372	0.16655	6.7542E-05	0.79219	0.00032126	405.53168214446373	28.808	0.37792	28.634	28.468	28.846	-0.17336					12	8	2	0	0	0	0.37624	1	1801	1801		26.063	19.045	1	30405	+		47164	22882	31744	31757	53206	53206					-0.025492653673381938
RDYLKLHSK	9	Unmodified	_RDYLKLHSK_					0	0	0		ENST00000556408.5_1_14:71787209-71880727:+|nuORF	ENST00000556408.5_1_14:71787209-71880727:+|nuORF	ENST00000556408.5_1_14:71787209-71880727:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.3338623046875	2	580.332747	1158.65094	0.33138	0.00019231	-0.63307	-0.00036739	-0.30168	-0.00017508	580.3322507801092	39.778	0.78229	39.866	39.53	40.312	0.088375					57	19	4	0	0	0	0.64555	1	2531	2531		44.377	1.981	1	1035100			47165	13743	31745	31758	53207	53207					0.0779621200854308
RDYSKGFGGK	10	Unmodified	_RDYSKGFGGK_					0	0	0		ENST00000415461.2_1_11:70253665-70266006:+|nuORF;nc|ENSG00000085733|Q14247-3|CTTN;ENSG00000085733|ENST00000301843|CTTN;nc|ENSG00000085733|Q14247-2|CTTN	ENST00000415461.2_1_11:70253665-70266006:+|nuORF	ENST00000415461.2_1_11:70253665-70266006:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.7850341796875	2	557.78563	1113.55671	-0.92705	-0.0005171	0.59255	0.00033052	-0.3345	-0.00018658	557.785921557231	36.217	2.1138	36.198	35.42	37.533	-0.018673					120	46	5	0	0	0	0.60985	1	2363	2363		49.536	0	1	2817100			47166	1538	31746	31759	53208	53208					0.004470731864330446
REAEETQSTL	10	Unmodified	_REAEETQSTL_					0	0	0		nc|ENSG00000125844|Q9P2E9-3|RRBP1;ENSG00000125844|ENST00000377813|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.2800903320312	2	582.280574	1162.5466	-1.7995	-0.0010478	1.7245	0.0010041	-0.07506	-4.3706E-05	582.2815583160785	28.951	0.56381	28.922	28.65	29.214	-0.029207					35	12	4	0	0	0	0.4503	1	1784	1784		59.931	8.7381	1	514880			47167	3420	31747	31760	53209	53209					-0.028175793294849427
REAEETQSTL	10	Unmodified	_REAEETQSTL_					0	0	0		nc|ENSG00000125844|Q9P2E9-3|RRBP1;ENSG00000125844|ENST00000377813|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.2802124023438	2	582.280574	1162.5466	0.15901	9.2587E-05	-0.18093	-0.00010535	-0.021922	-1.2765E-05	582.2803408768269	29.073	0.56097	28.9	28.674	29.235	-0.17336					34	12	3	0	0	0	0.57305	1	1827	1827		51.528	0.33506	1	491890			47168	3420	31747	31760	53210	53210					-0.028175793294849427
REAEKEQLWQ	10	Unmodified	_REAEKEQLWQ_					0	0	0			REV__nc|ENSG00000109111|Q7KZ85-2|SUPT6H	REV__nc|ENSG00000109111|Q7KZ85-2|SUPT6H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.5564270019531	3	439.557964	1315.65206	0.15693	6.8982E-05	-2.9978	-0.0013177	-2.8409	-0.0012487	439.5566148254639	22.028	0.43054	21.417	21.161	21.592	-0.6107					17	10	2	0	0	0	0.86446	1	869	869		30.569	1.9921	1	143300	+		47169	17747	31748	31761	53211	53211					0.006863815867973244
REAKKARKM	9	Unmodified	_REAKKARKM_					0	0	0		nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-4|SBNO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	559.3349609375	2	559.334767	1116.65498	-0.79115	-0.00044252	3.2184	0.0018002	2.4273	0.0013577	559.3365046411202	31.331	0.55992	31.349	31.121	31.681	0.018362					22	12	2	0	0	0	0.51307	1	1694	1694		51.335	8.9393	1	85898			47170	14960	31749	31762	53212	53212					0.10131978230629102
REAKKARKM	9	Unmodified	_REAKKARKM_					0	0	0		nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-4|SBNO1	nc|ENSG00000139697|A3KN83-4|SBNO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	559.335205078125	2	559.334767	1116.65498	0.12373	6.9204E-05	2.3344	0.0013057	2.4581	0.0013749	559.3359036293601	31.463	0.74524	31.412	31.127	31.872	-0.051031					35	16	3	0	0	0	0.51307	1	1789	1789		51.335	14.176	1	118640			47171	14960	31749	31762	53213	53213					0.10131978230629102
REAPLLLPSW	10	Unmodified	_REAPLLLPSW_					0	0	0		ENSG00000183971|ENST00000566435|NPW	ENSG00000183971|ENST00000566435|NPW	ENSG00000183971|ENST00000566435|NPW	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	591.3309326171875	2	591.337498	1180.66044	-0.63956	-0.0003782	1.0269	0.00060727	0.38739	0.00022908	591.338043030153	79.461	1.0112	79.521	78.846	79.857	0.059349					60	29	3	0	0	0	0.47091	2	7751	7751;7759		58.23	3.5354	1	297830			47172	7577	31750	31763	53214;53215	53214					0.0773398029409691
REAPLLLPSW	10	Unmodified	_REAPLLLPSW_					0	0	0		ENSG00000183971|ENST00000566435|NPW	ENSG00000183971|ENST00000566435|NPW	ENSG00000183971|ENST00000566435|NPW	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	591.330810546875	2	591.337498	1180.66044	0.77811	0.00046012	-0.60406	-0.0003572	0.17405	0.00010292	591.3368886778635	79.503	1.1585	79.447	78.675	79.834	-0.056503					61	32	3	0	0	0	0.49268	3	7954	7949;7954;7965		56.434	20.366	1	343670			47173	7577	31750	31763	53216;53217;53218	53217					0.0773398029409691
REAPLLLPSW	10	Unmodified	_REAPLLLPSW_					0	0	0		ENSG00000183971|ENST00000566435|NPW	ENSG00000183971|ENST00000566435|NPW	ENSG00000183971|ENST00000566435|NPW	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	591.330078125	2	591.337498	1180.66044	-1.3918	-0.00082303	1.5144	0.00089551	0.12256	7.2475E-05	591.3383093897371	79.318	0.9941	79.372	78.856	79.85	0.053841					66	30	3	0	0	0	0.76096	1	7840	7840		41.427	4.2675	1	329750			47174	7577	31750	31763	53219	53219					0.0773398029409691
REARARPLFPL	11	Unmodified	_REARARPLFPL_					0	0	0			REV__nc|ENSG00000119684|Q9UHC1-2|MLH3	REV__nc|ENSG00000119684|Q9UHC1-2|MLH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.5991516113281	3	442.598206	1324.77279	-0.78529	-0.00034757	3.7988	0.0016813	3.0135	0.0013338	442.5997035886443	48.9	1.7146	48.875	48.139	49.854	-0.025112					92	38	3	0	0	0	0.69071	1	4143	4143		33.039	2.4705	1	323300	+		47175	18369	31751	31764	53220	53220					0.12339254090920804
REARAVKPLRG	11	Unmodified	_REARAVKPLRG_					0	0	0			REV__ENSG00000132793|ENST00000373257|LPIN3	REV__ENSG00000132793|ENST00000373257|LPIN3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.8925170898438	2	626.88347	1251.75239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.35	1	108.43	107.93	108.93	0.084412								0	0	0	0.56276	1	11649	11649		32.751	3.5805	1		+		47176	19033	31752	31765	53221	53221					0.1365808343111894
REARFRKSA	9	Unmodified	_REARFRKSA_					0	0	0			REV__ENSG00000183963|ENST00000333137|SMTN	REV__ENSG00000183963|ENST00000333137|SMTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8198852539062	2	560.820338	1119.62612	-1.1548	-0.00064764	0.17668	9.9087E-05	-0.97813	-0.00054855	560.8203192234314	92.561	2.9962	92.631	91.312	94.308	0.06987					218	70	4	0	0	0	0.78983	1	9577	9577		27.882	0	1	775670	+		47177	22639	31753	31766	53222	53222					0.07109576925859074
REARPPGG	8	Unmodified	_REARPPGG_					0	0	0		ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2279357910156	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.91005	1	7716	7716		42.474	5.3154	1	743780			47178	9073	31754	31767	53223	53223					0.015265941262327942
REARPPGG	8	Unmodified	_REARPPGG_					0	0	0		ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2272033691406	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.9159	1	8043	8043		44.531	5.7249	1	888480			47179	9073	31754	31767	53224	53224					0.015265941262327942
REARPPGG	8	Unmodified	_REARPPGG_					0	0	0		ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2275695800781	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.9159	2	7776	7776;7793		44.531	2.1349	1	961790			47180	9073	31754	31767	53225;53226	53225					0.015265941262327942
REARPPGG	8	Unmodified	_REARPPGG_					0	0	0		ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.22735595703125	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.91005	1	7598	7598		42.474	7.2737	1	831720			47181	9073	31754	31767	53227	53227					0.015265941262327942
REARPPGG	8	Unmodified	_REARPPGG_					0	0	0		ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.22747802734375	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.87922	3	7356	7356;7443;7619		35.201	2.8053	1	634680			47182	9073	31754	31767	53228;53229;53230	53228					0.015265941262327942
REARPPGG	8	Unmodified	_REARPPGG_					0	0	0		ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	ENST00000055682.10_1_X:74144885-74144945:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.2270812988281	2	420.227751	838.440949	0.39025	0.000164	-0.22921	-9.6321E-05	0.16104	6.7675E-05	420.2275761359418	78.73	4.4768	79.141	77.509	81.986	0.4106					178	106	2	0	0	0	0.89494	1	9167	9167		37.159	1.5408	1	423290			47183	9073	31754	31767	53231	53231					0.015265941262327942
RECERVFDKI	10	Unmodified	_RECERVFDKI_					0	0	0		nc|ENSG00000118156|Q9H0D2-2|ZNF541;ENSG00000118156|ENST00000391901|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2226257324219	3	432.223928	1293.64996	-1.2201	-0.00052735	-2.6085	-0.0011275	-3.8286	-0.0016548	432.2227949823204	39.449	1.1723	39.817	39.299	40.472	0.36797					49	27	2	0	0	0	0.21391	1	3313	3313		84.817	19.66	1	3594900			47184	3012	31755	31768	53232	53232					0.014876295773319725
RECERVFDKI	10	Unmodified	_RECERVFDKI_					0	0	0		nc|ENSG00000118156|Q9H0D2-2|ZNF541;ENSG00000118156|ENST00000391901|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	nc|ENSG00000118156|Q9H0D2-2|ZNF541	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.2226257324219	3	432.223928	1293.64996	-0.91805	-0.0003968	-3.2198	-0.0013917	-4.1379	-0.0017885	432.22274537935755	39.23	1.8544	39.785	38.985	40.839	0.55449					124	43	5	0	0	0	0.2953	3	3271	3271;3295;3307		75.652	8.6903	1	2725200			47185	3012	31755	31768	53233;53234;53235	53233					0.014876295773319725
REDGIWVDR	9	Unmodified	_REDGIWVDR_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.2867431640625	2	573.288537	1144.56252	0.38627	0.00022144	-3.6865	-0.0021134	-3.3002	-0.001892	573.2863016098212	20.64	0.98573	20.181	19.732	20.718	-0.4591					47	22	4	0	0	0	0.24527	1	673	673		69.628	9.6968	1	277750	+		47186	20661	31756	31769	53236	53236					-0.003978283019250739
REDGLPVQGCW	11	Unmodified	_REDGLPVQGCW_					0	0	0		nc|ENSG00000197467|Q5TAT6-9|COL13A1	nc|ENSG00000197467|Q5TAT6-9|COL13A1	nc|ENSG00000197467|Q5TAT6-9|COL13A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	630.2980346679688	2	630.295504	1258.57646	1.0969	0.00069134	1.3559	0.00085462	2.4528	0.001546	630.2963342926464	23.71	0.66888	23.712	23.388	24.057	0.0018959					67	32	3	0	0	0	0.60058	1	751	751		44.377	2.9506	1	196440			47187	15192	31757	31770	53237	53237					-0.04248918865118867
REDNQTNRL	9	Unmodified	_REDNQTNRL_					0	0	0		ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;chr20:58839940-58840850|41|40.1|0.19|7.74|+|ENST00000667293|GNAS,None;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-2|GNAS;ENSG00000087460|ENST00000371085|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF	ENST00000313949.11_1_20:57415898-57485881:+|nuORF;nc|ENSG00000087460|Q5JWF2-2|GNAS;ENST00000480975.5_1_20:57464272-57485881:+|nuORF	ENST00000313949.11_1_20:57415898-57485881:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.287109375	2	573.286525	1144.5585	0.38627	0.00022144	-0.17798	-0.00010203	0.20829	0.00011941	573.2863016098212	20.64	0.98573	20.181	19.732	20.718	-0.4591					47	22	4	0	0	0	0.44529	1	685	685		54.722	8.7704	1	277750			47188	9958;14794;12367	31758	31771	53238	53238					-0.007999177956207859
REDNQTNRL	9	Unmodified	_REDNQTNRL_					0	0	0		ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;chr20:58839940-58840850|41|40.1|0.19|7.74|+|ENST00000667293|GNAS,None;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-2|GNAS;ENSG00000087460|ENST00000371085|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF	ENST00000313949.11_1_20:57415898-57485881:+|nuORF;nc|ENSG00000087460|Q5JWF2-2|GNAS;ENST00000480975.5_1_20:57464272-57485881:+|nuORF	ENST00000313949.11_1_20:57415898-57485881:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.2867431640625	2	573.286525	1144.5585	0.11082	6.3529E-05	-0.039099	-2.2415E-05	0.071716	4.1114E-05	573.2864109055901	20.889	0.68782	20.261	19.943	20.631	-0.62835					29	17	2	0	0	0	0.10914	2	709	709;721		90.601	19.305	1	355890			47189	9958;14794;12367	31758	31771	53239;53240	53239					-0.007999177956207859
REDPLLLKTLI	11	Unmodified	_REDPLLLKTLI_					0	0	0			REV__nc|ENSG00000164638|Q7RTT9-2|SLC29A4	REV__nc|ENSG00000164638|Q7RTT9-2|SLC29A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.6046142578125	3	437.606255	1309.79694	-0.39751	-0.00017395	-3.5376	-0.0015481	-3.9351	-0.001722	437.60462813644443	16.143	0.34375	16.063	15.955	16.299	-0.080017					26	13	3	0	0	0	0.75779	1	88	88		20.315	3.1483	1	98668	+		47190	21098	31759	31772	53241	53241					0.1544304973394901
REEEEDSTIE	10	Unmodified	_REEEEDSTIE_					0	0	0		ENSG00000047410|ENST00000367478|TPR	ENSG00000047410|ENST00000367478|TPR	ENSG00000047410|ENST00000367478|TPR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.7660522460938	2	618.764954	1235.51536	-0.24876	-0.00015393	1.3202	0.00081687	1.0714	0.00066295	618.7657540181829	31.683	0.63522	31.677	31.311	31.946	-0.0061474					30	14	3	0	0	0	0.82886	1	1765	1765		37.812	7.4938	1	133270			47191	960	31760	31773	53242	53242					-0.09298197154225818
REEEMDRQQ	9	Oxidation (M)	_REEEM(Oxidation (M))DRQQ_		REEEM(1)DRQQ		REEEM(41)DRQQ	0	0	1			REV__ENST00000585990.5_1_17:73910371-73916335:-|nuORF	REV__ENST00000585990.5_1_17:73910371-73916335:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.7655029296875	2	618.767308	1235.52006	-0.24876	-0.00015393	-2.4844	-0.0015372	-2.7331	-0.0016912	618.7657540181829	31.683	0.63522	31.677	31.311	31.946	-0.0061474					30	14	3	0	0	0	0.69624	1	1746	1746		40.778	7.9657	1	133270	+		47192	23039	31761	31774	53243	53243		351			-0.08827591492467945
REENAEQQAL	10	Unmodified	_REENAEQQAL_					0	0	0		ENSG00000108055|ENST00000361804|SMC3	ENSG00000108055|ENST00000361804|SMC3	ENSG00000108055|ENST00000361804|SMC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.2864379882812	2	594.286191	1186.55783	-1.0012	-0.00059502	1.1726	0.00069689	0.17141	0.00010187	594.2868113161653	29.952	0.6129	29.981	29.705	30.318	0.028618					31	13	3	0	0	0	0.19099	2	1929	1929;1942		88.177	29.931	1	586170			47193	2390	31762	31775	53244;53245	53244					-0.027987572353367796
REENAEQQAL	10	Unmodified	_REENAEQQAL_					0	0	0		ENSG00000108055|ENST00000361804|SMC3	ENSG00000108055|ENST00000361804|SMC3	ENSG00000108055|ENST00000361804|SMC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.2861328125	2	594.286191	1186.55783	0.15472	9.1949E-05	-0.19901	-0.00011827	-0.044291	-2.6321E-05	594.2860901738973	30.115	0.64814	30.026	29.706	30.354	-0.089544					33	14	3	0	0	0	0.38353	2	1953	1953;1963		65.465	7.2191	1	667230			47194	2390	31762	31775	53246;53247	53246					-0.027987572353367796
REENPEFTSL	10	Unmodified	_REENPEFTSL_					0	0	0		ENSG00000130775|ENST00000373921|THEMIS2	ENSG00000130775|ENST00000373921|THEMIS2	ENSG00000130775|ENST00000373921|THEMIS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.290771484375	2	611.290942	1220.56733	0.69203	0.00042303	-0.42929	-0.00026242	0.26274	0.00016061	611.2906149263899	49.979	0.53992	50.427	50.184	50.724	0.4476					33	12	3	0	0	0	0.38353	1	4897	4897		65.465	8.7443	1	900540			47195	3683	31763	31776	53248	53248					-0.03412988949799001
REENPEFTSL	10	Unmodified	_REENPEFTSL_					0	0	0		ENSG00000130775|ENST00000373921|THEMIS2	ENSG00000130775|ENST00000373921|THEMIS2	ENSG00000130775|ENST00000373921|THEMIS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.291259765625	2	611.290942	1220.56733	0.97631	0.00059681	-0.80903	-0.00049455	0.16728	0.00010226	611.2903875104481	49.761	0.57945	50.606	50.395	50.974	0.84501					33	13	4	0	0	0	0.16188	1	4886	4886		93.598	11.357	1	971790			47196	3683	31763	31776	53249	53249					-0.03412988949799001
REEVGNISI	9	Unmodified	_REEVGNISI_					0	0	0		ENSG00000164754|ENST00000297338|RAD21;chr8:116866761-116874250|49|11.71|0.69|4.09|-|ENST00000519837|RAD21,RAD21;chr8:116866761-116874206|49|14.8|0.54|4.77|-|ENST00000522699|RAD21,RAD21	ENSG00000164754|ENST00000297338|RAD21	ENSG00000164754|ENST00000297338|RAD21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7710876464844	2	508.772188	1015.52982	1.319	0.00067108	-1.5385	-0.00078273	-0.21946	-0.00011166	508.77133558794765	49.499	0.60856	50.344	50.074	50.683	0.84501					37	14	3	0	0	0	0.2083	1	4851	4851		72.879	0	1	1920100			47197	511	31764	31777	53250	53250					0.022679645752418764
REFILKAFSK	10	Unmodified	_REFILKAFSK_					0	0	0		nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A	nc|ENSG00000169432|Q15858-4|SCN9A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8697509765625	2	619.866423	1237.71829	1.2588	0.00078029	3.961	0.0024553	5.2198	0.0032356	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.86272	1	11422	11422		24.519	1.9395	1	4742500			47198	313	31765	31778	53251	53251					0.10894242219501393
REFLLPRHP	9	Unmodified	_REFLLPRHP_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.8328247070312	2	582.835457	1163.65636	-1.3452	-0.00078404	-3.4542	-0.0020132	-4.7994	-0.0027973	582.8334573704366	94.259	3.5437	94.457	93.113	96.657	0.19827					191	84	3	0	0	0	0.67345	1	9481	9481		42.396	11.892	1	775360			47199	6985	31766	31779	53252	53252					0.08107935591056048
REFPYSLF	8	Unmodified	_REFPYSLF_					0	0	0		ENST00000381844.8_1_2:9724735-9724870:-|nuORF	ENST00000381844.8_1_2:9724735-9724870:-|nuORF	ENST00000381844.8_1_2:9724735-9724870:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.7703247070312	2	529.768917	1057.52328	-0.11856	-6.2808E-05	3.5817	0.0018975	3.4632	0.0018347	529.7705146887486	67.089	0.97255	67.222	66.897	67.869	0.13326					84	40	3	0	0	0	0.93293	1	5987	5987		51.335	1.3109	1	711500			47200	10963	31767	31780	53253	53253					-0.0031792858549124503
REGEKQNER	9	Unmodified	_REGEKQNER_					0	0	0			REV__ENST00000407997.3_1_22:39473052-39473223:+|nuORF	REV__ENST00000407997.3_1_22:39473052-39473223:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	573.2862548828125	2	573.286525	1144.5585	-1.3935	-0.00079889	1.3656	0.00078287	-0.027932	-1.6013E-05	573.2873936717183	30.268	1.1577	30.268	29.824	30.981	0					60	39	2	0	0	0	0.76419	1	1372	1372		35.152	1.2304	1	122110	+		47201	26323	31768	31781	53254	53254					-0.007999177956207859
REGLIVGFVH	10	Unmodified	_REGLIVGFVH_					0	0	0		nc|ENSG00000149823|Q9UID3-2|VPS51;ENSG00000149823|ENST00000279281|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.8214111328125	2	563.822015	1125.62948	-0.38665	-0.000218	1.9455	0.0010969	1.5588	0.0008789	563.8228498879856	46.48	0.84751	47.403	47.11	47.958	0.92315					37	19	4	0	0	0	0.77314	1	4427	4427		40.778	0	1	4727600			47202	5052	31769	31782	53255	53255					0.0716882697984147
REGLSKVNK	9	Unmodified	_REGLSKVNK_					0	0	0		ENSG00000125734|ENST00000264080|GPR108	ENSG00000125734|ENST00000264080|GPR108	ENSG00000125734|ENST00000264080|GPR108	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.803466796875	2	515.803823	1029.59309	0.99159	0.00051147	-1.0995	-0.00056714	-0.10793	-5.5671E-05	515.8030952914191	22.982	0.88607	22.563	22.23	23.116	-0.41879					49	20	4	0	0	0	0.77244	1	1004	1004		32.812	4.9302	1	541750			47203	3411	31770	31783	53256	53256					0.07947950083121214
REGRPGVLG	9	Unmodified	_REGRPGVLG_					0	0	0			REV__ENST00000493991.5_1_12:48375847-48382223:-|nuORF	REV__ENST00000493991.5_1_12:48375847-48382223:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7689208984375	2	470.769783	939.525013	0.25998	0.00012239	-1.8077	-0.000851	-1.5477	-0.00072861	470.7687399956873	50.307	1.239	50.754	50.307	51.546	0.4476					93	29	5	0	0	0	0.44421	1	4985	4985		54.776	7.119	1	9098100	+		47204	19526	31771	31784	53257	53257					0.05283125223149909
REGRPGVLG	9	Unmodified	_REGRPGVLG_					0	0	0			REV__ENST00000493991.5_1_12:48375847-48382223:-|nuORF	REV__ENST00000493991.5_1_12:48375847-48382223:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.76910400390625	2	470.769783	939.525013	0.2097	9.8719E-05	-1.7244	-0.0008118	-1.5147	-0.00071309	470.76868671211275	51.093	0.86503	51.845	51.491	52.356	0.75174					55	20	5	0	0	0	0.69624	1	5083	5083		40.778	1.972	1	3620900	+		47205	19526	31771	31784	53258	53258					0.05283125223149909
REGRPLAP	8	Unmodified	_REGRPLAP_					0	0	0		ENSG00000186806|ENST00000335624|VSIG10L;nc|ENSG00000186806|Q86VR7-2|VSIG10L	ENSG00000186806|ENST00000335624|VSIG10L	ENSG00000186806|ENST00000335624|VSIG10L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.25848388671875	2	448.259051	894.503549	-1.3629	-0.00061094	1.4471	0.00064866	0.084131	3.7712E-05	448.2596556507269	89.763	2.6764	90.233	89.394	92.071	0.47068					116	66	2	0	0	0	0.87922	1	10621	10621		31.955	1.4512	1	2268200			47206	7820	31772	31785	53259	53259					0.05207740194418875
REHMERRRRFE	11	Unmodified	_REHMERRRRFE_					0	0	0		nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;nc|ENSG00000204120|Q6Y7W6-5|GIGYF2;ENSG00000204120|ENST00000373563|GIGYF2;nc|ENSG00000204120|Q6Y7W6-3|GIGYF2	nc|ENSG00000204120|Q6Y7W6-4|GIGYF2	nc|ENSG00000204120|Q6Y7W6-4|GIGYF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	534.6098022460938	3	534.61118	1600.81171	0.16551	8.8482E-05	-3.4768	-0.0018587	-3.3112	-0.0017702	534.609388213352	26.348	0.74506	26.457	26.169	26.914	0.10901					88	34	4	0	0	0	0.8498	1	985	985		6.001	1.3577	1	349720			47207	8415	31773	31786	53260	53260					0.03533611382977142
REHPEMGP	8	Oxidation (M)	_REHPEM(Oxidation (M))GP_		REHPEM(1)GP		REHPEM(42)GP	0	0	1		ENSG00000159433|ENST00000290607|STARD9;nc|ENSG00000159433|Q9P2P6-2|STARD9;ENST00000564158.5_1_15:42867889-42955097:+|nuORF;nc|ENSG00000159433|Q9P2P6-3|STARD9	ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.71795654296875	2	484.716359	967.418164	1.7202	0.00083382	1.1811	0.00057251	2.9014	0.0014063	484.71724999015095	100.07	1.5114	100.41	100.06	101.57	0.33295					128	39	5	0	0	0	0.91005	1	12239	12239		42.474	11.971	1	10028000			47208	5530	31774	31787	53261	53261		97			-0.06684793053534577
REIEENLKKIE	11	Unmodified	_REIEENLKKIE_					0	0	0			REV__ENSG00000198752|ENST00000361246|CDC42BPB	REV__ENSG00000198752|ENST00000361246|CDC42BPB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.78253173828125	3	467.596308	1399.76709	-0.15356	-7.1806E-05	3.4996	0.0016364	3.346	0.0015646	467.5977952808617	30.075	0.51908	29.986	29.792	30.311	-0.089544					17	11	2	0	0	0	0.17365	1	1984	1984		21.032	3.1991	1	65936	+		47209	23373	31775	31788	53262	53262					0.08320065997918391
REIESSPQY	9	Unmodified	_REIESSPQY_					0	0	0		nc|ENSG00000168488|Q8WWM7-6|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;ENSG00000168488|ENST00000336783|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;ENST00000564284.1_1_16:28841101-28842119:+|nuORF;ENST00000570284.1_1_16:28840745-28842349:+|nuORF;nc|ENSG00000168488|Q8WWM7-7|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7669677734375	2	554.767103	1107.51965	-0.049561	-2.7495E-05	0.72257	0.00040086	0.67301	0.00037337	554.7671502833035	34.684	0.90481	34.627	34.262	35.167	-0.056385					37	20	3	0	0	0	0.70638	2	2184	2184;2207		40.058	11.977	1	137990			47210	6405	31776	31789	53263;53264	53263					-0.029806431499764585
REILDALRNLL	11	Unmodified	_REILDALRNLL_					0	0	0			REV__ENST00000548536.1_1_12:112213467-112247376:+|nuORF	REV__ENST00000548536.1_1_12:112213467-112247376:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.60101318359375	3	442.601504	1324.78268	-0.96202	-0.00042579	0.15349	6.7935E-05	-0.80853	-0.00035786	442.60138371478644	103.97	1.3087	103.97	103.68	104.99	0					72	32	4	0	0	0	0.75457	1	10702	10702		21.032	0	1	296460	+		47211	17859	31777	31790	53265	53265					0.13328397305645012
REILDALRNLL	11	Unmodified	_REILDALRNLL_					0	0	0			REV__ENST00000548536.1_1_12:112213467-112247376:+|nuORF	REV__ENST00000548536.1_1_12:112213467-112247376:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.6011047363281	3	442.601504	1324.78268	-0.15208	-6.7312E-05	-0.89292	-0.00039521	-1.045	-0.00046252	442.6010716654733	103.97	1.4842	103.96	103.51	105	-0.0035706					84	35	4	0	0	0	0.74405	1	11202	11202		23.378	1.5975	1	603650	+		47212	17859	31777	31790	53266	53266					0.13328397305645012
REILDALRNLL	11	Unmodified	_REILDALRNLL_					0	0	0			REV__ENST00000548536.1_1_12:112213467-112247376:+|nuORF	REV__ENST00000548536.1_1_12:112213467-112247376:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.60137939453125	3	442.601504	1324.78268	2.7378	0.0012118	-3.66	-0.0016199	-0.9222	-0.00040817	442.5997945412009	103.8	1.4388	103.76	103.37	104.81	-0.043755					90	34	4	0	0	0	0.74771	1	11388	11388		22.562	3.2989	1	569000	+		47213	17859	31777	31790	53267	53267					0.13328397305645012
REIQTAVRL	9	Unmodified	_REIQTAVRL_					0	0	0		chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15;chr6:27841661-27852109|62|16.63|0.85|4.28|+|ENST00000606613|H2BC15,H2BC15;ENSG00000203814|ENST00000369167|H2BC18;nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000146047|ENST00000274764|H2BC1;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000124635|ENST00000339812|H2BC11	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15;ENSG00000197903|ENST00000356950|H2BC12	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.32470703125	2	543.324922	1084.63529	-1.108	-0.00060199	1.029	0.00055908	-0.078988	-4.2916E-05	543.3253431661017	38.617	0.87661	38.959	38.697	39.574	0.34187					38	20	3	0	0	0	0.052654	2	3199	3188;3199		106.68	33.804	1	1511200			47214	473;8212	31778	31791	53268;53269	53269					0.09635925491488706
REIQTAVRL	9	Unmodified	_REIQTAVRL_					0	0	0		chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15;chr6:27841661-27852109|62|16.63|0.85|4.28|+|ENST00000606613|H2BC15,H2BC15;ENSG00000203814|ENST00000369167|H2BC18;nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000146047|ENST00000274764|H2BC1;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000124635|ENST00000339812|H2BC11	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15;ENSG00000197903|ENST00000356950|H2BC12	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.3247680664062	2	543.324922	1084.63529	-0.88466	-0.00048066	0.98256	0.00053385	0.097904	5.3194E-05	543.3253208814141	38.486	0.61627	39.008	38.711	39.328	0.52235					38	14	3	0	0	0	0.10914	2	3178	3178;3189		90.601	23.734	1	1445400			47215	473;8212	31778	31791	53270;53271	53270					0.09635925491488706
REKCCLAN	8	Unmodified	_REKCCLAN_					0	0	0			REV__ENST00000586489.5_1_18:33060501-33077518:-|nuORF	REV__ENST00000586489.5_1_18:33060501-33077518:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.72308349609375	2	468.723129	935.431706	-1.001	-0.0004692	1.2728	0.0005966	0.2718	0.0001274	468.7237111234843	78.023	1.0772	78.15	77.878	78.955	0.12695					84	33	4	0	0	0	0.86677	1	7341	7341		27.882	1.0861	1	786850	+		47216	29104	31779	31792	53272	53272					-0.03859258545969624
REKKEESEL	9	Unmodified	_REKKEESEL_					0	0	0		nc|ENSG00000067082|Q99612-3|KLF6;nc|ENSG00000067082|Q99612-2|KLF6;ENSG00000067082|ENST00000497571|KLF6	nc|ENSG00000067082|Q99612-3|KLF6	nc|ENSG00000067082|Q99612-3|KLF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.3024291992188	2	574.30131	1146.58807	0.12782	7.341E-05	-0.51612	-0.00029641	-0.3883	-0.000223	574.3007389596266	17.659	0.33767	17.176	17.035	17.373	-0.48256					11	7	2	0	0	0	0.63647	1	290	290		45.022	9.4039	1	71275			47217	1175	31780	31793	53273	53273					0.020636014298588634
REKKERRKEVQ	11	Unmodified	_REKKERRKEVQ_					0	0	0			REV__ENSG00000261649|ENST00000567390|GOLGA6L7	REV__ENSG00000261649|ENST00000567390|GOLGA6L7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	496.2923889160156	3	495.958462	1484.85356	-0.55609	-0.0002758	1.2506	0.00062025	0.69452	0.00034445	495.95900016490566	102.37	1.472	102.57	101.58	103.06	0.19484					109	35	4	0	0	0	0.81407	1	10690	10690		8.4073	0	1	494170	+		47218	23945	31781	31794	53274	53274					0.13052490343170575
REKKSLRWTRV	11	Unmodified	_REKKSLRWTRV_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.95819091796875	3	486.959915	1457.85791	-0.68917	-0.0003356	-1.13	-0.00055025	-1.8191	-0.00088584	486.95912437629556	102.63	1.2663	102.82	102.18	103.44	0.19484					77	31	5	0	0	0	0.80813	1	10827	10827		9.6461	0	1	378820			47219	5333	31782	31795	53275	53275					0.14729999556698203
REKLHSGG	8	Unmodified	_REKLHSGG_					0	0	0		ENST00000394685.7_1_15:81071845-81165978:+|nuORF	ENST00000394685.7_1_15:81071845-81165978:+|nuORF	ENST00000394685.7_1_15:81071845-81165978:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24072265625	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.87479	1	7932	7932		30.504	0	1	968500			47220	11075	31783	31796	53276	53276					0.02122863297722688
REKLHSGG	8	Unmodified	_REKLHSGG_					0	0	0		ENST00000394685.7_1_15:81071845-81165978:+|nuORF	ENST00000394685.7_1_15:81071845-81165978:+|nuORF	ENST00000394685.7_1_15:81071845-81165978:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2408142089844	2	442.240858	882.467164	-0.73522	-0.00032514	0.71434	0.00031591	-0.020876	-9.2322E-06	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.89494	1	9329	9329		37.159	1.5408	1	866900			47221	11075	31783	31796	53277	53277					0.02122863297722688
REKLRKYVF	9	Unmodified	_REKLRKYVF_					0	0	0		ENSG00000213213|ENST00000338005|CCDC183;nc|ENSG00000213213|Q5T5S1-3|CCDC183;ENST00000415992.5_1_9:139693810-139699267:+|nuORF;nc|ENSG00000213213|Q5T5S1-4|CCDC183;ENST00000430612.5_1_9:139694306-139700853:+|nuORF;ENST00000371682.7_1_9:139690828-139700853:+|nuORF;nc|ENSG00000213213|Q5T5S1-2|CCDC183	ENSG00000213213|ENST00000338005|CCDC183	ENSG00000213213|ENST00000338005|CCDC183	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8694458007812	2	619.87204	1237.72953	-0.18235	-0.00011304	-3.8434	-0.0023824	-4.0258	-0.0024955	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.69624	1	9550	9550		40.778	10.275	1	2627900			47222	8582	31784	31797	53278	53278					0.1201706431365892
REKRKIKKPL	10	Unmodified	_REKRKIKKPL_					0	0	0			REV__ENSG00000188177|ENST00000409871|ZC3H6	REV__ENSG00000188177|ENST00000409871|ZC3H6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.59759521484375	3	432.625984	1294.85612	-1.5731	-0.00068058	-1.739	-0.00075232	-3.3121	-0.0014329	432.6247671212931	106.1	0.40056	106.25	106.07	106.47	0.14843					16	9	2	0	0	0	0.37624	1	11378	11378		20.03	8.3945	1	80347	+		47223	22986	31785	31798	53279	53279					0.22048990538792168
REKRKIKKPL	10	Unmodified	_REKRKIKKPL_					0	0	0			REV__ENSG00000188177|ENST00000409871|ZC3H6	REV__ENSG00000188177|ENST00000409871|ZC3H6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59765625	3	432.625984	1294.85612	0.73461	0.00031781	-2.3751	-0.0010275	-1.6405	-0.00070973	432.6254256813378	106.11	0.27458	106.21	105.99	106.27	0.099007					11	6	2	0	0	0	0.37624	1	11326	11326		14.694	4.5898	1	152530	+		47224	22986	31785	31798	53280	53280					0.22048990538792168
REKRPRLPRKL	11	Unmodified	_REKRPRLPRKL_					0	0	0		ENSG00000169592|ENST00000563197|INO80E;ENST00000569957.5_1_16:30012641-30012857:+|nuORF;ENST00000562441.5_1_16:30012641-30015954:+|nuORF	ENSG00000169592|ENST00000563197|INO80E	ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.64654541015625	3	483.647671	1447.92118	-0.83799	-0.00040529	-1.7948	-0.00086806	-2.6328	-0.0012733	483.646679966578	46.367	1.8019	46.382	45.827	47.628	0.015514					182	51	6	0	0	0	0.8398	1	3375	3375		6.6596	0.65857	1	4521700			47225	6507	31786	31799	53281	53281					0.2151398506462101
REKRRGVG	8	Unmodified	_REKRRGVG_					0	0	0		ENSG00000129646|ENST00000680821|QRICH2	ENSG00000129646|ENST00000680821|QRICH2	ENSG00000129646|ENST00000680821|QRICH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2884521484375	2	479.288674	956.562795	1.1411	0.00054692	-1.0598	-0.00050794	0.081317	3.8974E-05	479.28802767290887	16.959	0.34087	16.472	16.326	16.667	-0.48718					17	7	3	0	0	0	0.91005	1	199	199		42.474	0.078325	1	564860			47226	3598	31787	31800	53282	53282					0.08277636208617878
REKTVLQS	8	Unmodified	_REKTVLQS_					0	0	0		ENST00000467998.1_1_1:151508635-151509819:+|nuORF;ENSG00000143375|ENST00000271636|CGN	ENST00000467998.1_1_1:151508635-151509819:+|nuORF	ENST00000467998.1_1_1:151508635-151509819:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.7773132324219	2	480.777274	959.539994	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.363	1	30.316	29.816	30.816	-0.047064								0	0	0	0.29724	1	1649	1649		24.519	0.31644	1				47227	4622	31788	31801	53283	53283					0.058605723004689025
REKVLHIPVF	10	Unmodified	_REKVLHIPVF_					0	0	0			REV__nc|nan|Q6ZRI6-2|C15orf39	REV__nc|nan|Q6ZRI6-2|C15orf39	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.3715209960938	2	619.374415	1236.73428	-1.2262	-0.00075948	-3.0346	-0.0018796	-4.2608	-0.0026391	619.3724290211392	101.55	1.3094	101.7	101.32	102.63	0.15505					84	32	4	0	0	0	0.86763	1	10575	10575		26.693	5.746	1	1786600	+		47228	21362	31789	31802	53284	53284					0.12537948456406411
RELASLCLQD	10	Unmodified	_RELASLCLQD_					0	0	0		ENSG00000154252|ENST00000192314|GAL3ST2	ENSG00000154252|ENST00000192314|GAL3ST2	ENSG00000154252|ENST00000192314|GAL3ST2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.2899169921875	2	574.29243	1146.57031	0.2625	0.00015075	-4.2734	-0.0024542	-4.0109	-0.0023034	574.2898570404749	16.273	0.36927	15.675	15.555	15.924	-0.59873					15	7	3	0	0	0	0.71918	1	109	109		43.651	2.8726	1	486150			47229	5266	31790	31803	53285	53285					0.0028856290334715595
RELETESNEP	10	Unmodified	_RELETESNEP_					0	0	0			REV__nc|ENSG00000187164|A0MZ66-8|SHTN1	REV__nc|ENSG00000187164|A0MZ66-8|SHTN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	602.2789916992188	2	602.278032	1202.54151	-0.185	-0.00011142	0.97152	0.00058512	0.78652	0.0004737	602.2784577384543	40.43	0.64768	40.399	40.044	40.692	-0.030991					42	17	3	0	0	0	0.57924	1	2903	2903		51.193	5.2204	1	627000	+		47230	22906	31791	31804	53286	53286					-0.051658831920804005
RELLEIVLRLL	11	Unmodified	_RELLEIVLRLL_					0	0	0			REV__nc|ENSG00000023287|Q8TDY2-2|RB1CC1	REV__nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.2958984375	3	456.297533	1365.87077	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.369	1	66.334	65.834	66.834	-0.035217								0	0	0	0.56276	1	6345	6345		14.086	3.9821	1		+		47231	16248	31792	31805	53287	53287					0.20247017896258512
RELRKVRRHLW	11	Unmodified	_RELRKVRRHLW_					0	0	0			REV__ENSG00000204482|ENST00000438075|LST1	REV__ENSG00000204482|ENST00000438075|LST1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2722778320312	3	516.983054	1547.92733	0.03831	1.9806E-05	3.829	0.0019795	3.8673	0.0019993	517.3194153063101	49.321	1.1337	49.781	49.104	50.237	0.45983					58	27	3	0	0	0	0.181	1	4707	4707		18.531	15.679	1	571150	+		47232	23498	31793	31806	53288	53288					0.175285032961483
RELRKVRRHLW	11	Unmodified	_RELRKVRRHLW_					0	0	0			REV__ENSG00000204482|ENST00000438075|LST1	REV__ENSG00000204482|ENST00000438075|LST1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2716064453125	3	516.983054	1547.92733	0.37149	0.00019206	3.4402	0.0017785	3.8117	0.0019706	516.9846245529166	49.018	1.1643	49.923	49.29	50.454	0.90424					72	28	4	0	0	0	0.18216	1	4690	4690		14.086	10.875	1	705390	+		47233	23498	31793	31806	53289	53289					0.175285032961483
RELTQLAKRHL	11	Unmodified	_RELTQLAKRHL_					0	0	0			REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	REV__ENST00000491786.5_1_2:47205894-47301059:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6086730957031	3	455.608882	1363.80482	-0.88204	-0.00040187	-0.15867	-7.2292E-05	-1.0407	-0.00047416	455.6087169982617	69.938	2.9068	70.322	69.842	72.749	0.38416					146	73	3	0	0	0	0.33562	1	7806	7806		65.278	34.209	1	869170	+		47234	16563	31794	31807	53290	53290					0.13746621774066625
RELVEKNSQL	10	Unmodified	_RELVEKNSQL_					0	0	0		nc|ENSG00000157514|Q99576-5|TSC22D3;nc|ENSG00000157514|Q99576|TSC22D3;ENSG00000157514|ENST00000372383|TSC22D3	nc|ENSG00000157514|Q99576-5|TSC22D3	nc|ENSG00000157514|Q99576-5|TSC22D3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.3380737304688	2	608.338227	1214.6619	-0.55482	-0.00033752	0.60316	0.00036692	0.048339	2.9406E-05	608.3384519772599	30.696	0.6201	30.725	30.45	31.07	0.028618					30	13	3	0	0	0	0.34329	1	2021	2021		68.846	12.412	1	306100			47235	5435	31795	31808	53291	53291					0.0631556959219779
RELYRRMARKN	11	Unmodified	_RELYRRMARKN_					0	0	0			REV__nc|ENSG00000065361|P21860-4|ERBB3	REV__nc|ENSG00000065361|P21860-4|ERBB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.6162414550781	3	498.280771	1491.82048	0.19127	9.5308E-05	4.2217	0.0021036	4.413	0.0021989	498.28272038181507	33.175	0.58385	33.285	32.974	33.558	0.10991					55	26	3	0	0	0	0.79224	1	1578	1578		12.957	1.5029	1	250960	+		47236	16497	31796	31809	53292	53292					0.09424585019473852
REMRYKEIE	9	Unmodified	_REMRYKEIE_					0	0	0			REV__ENSG00000101161|ENST00000266079|PRPF6	REV__ENSG00000101161|ENST00000266079|PRPF6	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	627.319580078125	2	627.31898	1252.62341	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.109	1	62.076	61.576	62.576	-0.033173								0	0	0	0.27769	1	5878	5878		64.207	2.0999	1		+		47237	17246	31797	31810	53293	53293					0.007199406860081581
REMTCGRHP	9	Carbamidomethyl (C),Oxidation (M)	_REM(Oxidation (M))TC(Carbamidomethyl (C))GRHP_	REMTC(1)GRHP	REM(1)TCGRHP	REMTC(51)GRHP	REM(51)TCGRHP	0	1	1		ENST00000229829.6_1_6:32974526-32975093:-|nuORF	ENST00000229829.6_1_6:32974526-32975093:-|nuORF	ENST00000229829.6_1_6:32974526-32975093:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.2578125	2	580.258399	1158.50225	-0.13873	-8.0496E-05	3.2516	0.0018868	3.1129	0.0018063	580.2601037354048	34.043	0.56614	33.987	33.743	34.309	-0.056385					18	12	2	0	0	0	0.51592	1	2125	2125		51.193	7.0759	1	24974			47238	9210	31798	31811	53294	53294	116	161			-0.07066585228267286
REMTCGRHP	9	Carbamidomethyl (C),Oxidation (M)	_REM(Oxidation (M))TC(Carbamidomethyl (C))GRHP_					0	1	1		ENST00000229829.6_1_6:32974526-32975093:-|nuORF	ENST00000229829.6_1_6:32974526-32975093:-|nuORF	ENST00000229829.6_1_6:32974526-32975093:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	580.258399	1158.50225	-0.95445	-0.00055383	3.5152	0.0020397	2.5608	0.0014859	580.2604684483255	33.97	0.43717	33.972	33.667	34.104	0.0026054	-0.0073535	0.00014948	NaN	51.193	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22656			47239	9210	31798	31811			116	161			-0.07066585228267286
RENAYLTK	8	Unmodified	_RENAYLTK_					0	0	0		ENSG00000140057|ENST00000267584|AK7	ENSG00000140057|ENST00000267584|AK7	ENSG00000140057|ENST00000267584|AK7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7707214355469	2	497.769448	993.524344	2.1837	0.001087	0.94386	0.00046982	3.1275	0.0015568	497.7697728239385	26.206	1.1075	25.866	25.53	26.637	-0.34035					61	24	4	0	0	0	0.3822	1	1423	1423		90.37	5.209	1	2042700			47240	4413	31799	31812	53295	53295					0.02732285783417865
RENILPIWRS	10	Unmodified	_RENILPIWRS_					0	0	0			REV__nc|ENSG00000126858|Q8IXI2-6|RHOT1	REV__nc|ENSG00000126858|Q8IXI2-6|RHOT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.3634033203125	2	642.364579	1282.7146	-1.1506	-0.00073908	-1.7683	-0.0011359	-2.9188	-0.001875	642.3639567174044	110.02	1.5274	110.03	109.72	111.24	0.0060425					172	55	4	0	0	0	0.76096	1	11851	11851		41.427	2.1738	1	1394500	+		47241	18716	31800	31813	53296	53296					0.0845557244565498
RENPLELRL	9	Unmodified	_RENPLELRL_					0	0	0		nc|ENSG00000123329|Q9BRR9-4|ARHGAP9;nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;ENSG00000123329|ENST00000393791|ARHGAP9;nc|ENSG00000123329|Q9BRR9|ARHGAP9	nc|ENSG00000123329|Q9BRR9-4|ARHGAP9	nc|ENSG00000123329|Q9BRR9-4|ARHGAP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.3314819335938	2	570.330205	1138.64586	-0.44085	-0.00025143	0.53079	0.00030273	0.089938	5.1295E-05	570.3305184443199	54.641	0.33503	54.615	54.368	54.703	-0.025955					18	10	2	0	0	0	0.6107	1	4943	4943		46.457	5.3767	1	91760			47242	3267	31801	31814	53297	53297					0.08207908145936926
RENPLELRL	9	Unmodified	_RENPLELRL_					0	0	0		nc|ENSG00000123329|Q9BRR9-4|ARHGAP9;nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;ENSG00000123329|ENST00000393791|ARHGAP9;nc|ENSG00000123329|Q9BRR9|ARHGAP9	nc|ENSG00000123329|Q9BRR9-4|ARHGAP9	nc|ENSG00000123329|Q9BRR9-4|ARHGAP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.3291625976562	2	570.330205	1138.64586	0.42359	0.00024159	-0.079385	-4.5275E-05	0.34421	0.00019631	570.3301084176036	54.642	0.40913	54.669	54.442	54.851	0.027142					18	14	2	0	0	0	0.3164	1	4858	4858		63.534	5.3039	1	113650			47243	3267	31801	31814	53298	53298					0.08207908145936926
RENPLELRL	9	Unmodified	_RENPLELRL_					0	0	0		nc|ENSG00000123329|Q9BRR9-4|ARHGAP9;nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;ENSG00000123329|ENST00000393791|ARHGAP9;nc|ENSG00000123329|Q9BRR9|ARHGAP9	nc|ENSG00000123329|Q9BRR9-4|ARHGAP9	nc|ENSG00000123329|Q9BRR9-4|ARHGAP9	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	570.330205	1138.64586	-1.0793	-0.00061555	1.7081	0.00097418	0.6288	0.00035863	570.3310538893516	54.699	0.30091	54.691	54.455	54.756	-0.0077057	0.032746	0.0011737	NaN	63.534	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82495			47244	3267	31801	31814							0.08207908145936926
REPARRPH	8	Unmodified	_REPARRPH_					0	0	0		ENST00000406875.7_1_7:139248020-139248128:-|nuORF	ENST00000406875.7_1_7:139248020-139248128:-|nuORF	ENST00000406875.7_1_7:139248020-139248128:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7842102050781	2	509.786299	1017.55804	2.0655	0.0010529	-3.7415	-0.0019074	-1.676	-0.00085442	509.7839834358301	106.91	0.92004	107.01	106.61	107.53	0.10396					57	33	3	0	0	0	0.884	1	12998	12998		33.516	0.70317	1	400230			47245	11278	31802	31815	53299	53299					0.04996752065835608
REPPPRLLW	9	Unmodified	_REPPPRLLW_					0	0	0		nc|ENSG00000196166|Q6ZUL3-2|LINC03042;nc|ENSG00000196166|Q6ZUL3|LINC03042	nc|ENSG00000196166|Q6ZUL3-2|LINC03042	nc|ENSG00000196166|Q6ZUL3-2|LINC03042	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3353881835938	2	582.337833	1162.66111	-0.30079	-0.00017516	-3.0653	-0.001785	-3.3661	-0.0019602	582.3359512116871	20.122	0.73913	19.652	19.35	20.089	-0.46967					42	15	4	0	0	0	0.76996	1	606	606		33.516	0.70317	1	789020			47246	15177	31803	31816	53300	53300					0.08628819733803539
REQGKGLLST	10	Unmodified	_REQGKGLLST_					0	0	0			REV__ENST00000519326.1_1_8:81942229-81982374:-|nuORF	REV__ENST00000519326.1_1_8:81942229-81982374:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.8067016601562	2	544.806562	1087.59857	0.41149	0.00022418	-0.3772	-0.0002055	0.034291	1.8682E-05	544.8063017118704	24.787	0.48479	24.838	24.602	25.087	0.050451					23	13	2	0	0	0	0.66675	1	951	951		46.457	8.6453	1	61132	+		47247	24155	31804	31817	53301	53301					0.05827628874953916
REQLALLKLVL	11	Unmodified	_REQLALLKLVL_					0	0	0		ENSG00000134815|ENST00000328771|DHX34;ENST00000486327.6_1_19:47870378-47879405:+|nuORF	ENSG00000134815|ENST00000328771|DHX34	ENSG00000134815|ENST00000328771|DHX34	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59765625	3	432.618495	1294.83366	0.7346	0.0003178	-0.98467	-0.00042599	-0.25007	-0.00010819	432.6172577964269	106.07	0.1963	106.17	105.99	106.19	0.099007					6	4	2	0	0	0	0.17643	1	11326	11326		17.833	0	1	80990			47248	3960	31805	31818	53302	53302					0.19803346350477113
REQLRRLQLW	10	Unmodified	_REQLRRLQLW_					0	0	0			REV__chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	REV__chr19:35900975-35903351|30|10.23|0.37|4.8|+|0|TE_info:AluSx1,AluSx1_dup106967,Alu,SINE,donor,-,35900851,35900975|None,HCST|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.6082763671875	3	466.608993	1396.80515	0.32068	0.00014963	-2.4743	-0.0011545	-2.1536	-0.0010049	466.60769889886956	100.37	2.2833	100.42	99.018	101.3	0.046356					147	53	4	0	0	0	0.8573	1	10741	10741		16.007	0.6693	1	458180	+		47249	15698	31806	31819	53303	53303					0.12262041493931974
REQLTFAMGK	10	Unmodified	_REQLTFAMGK_					0	0	0			REV__nc|ENSG00000082212|P23368-2|ME2	REV__nc|ENSG00000082212|P23368-2|ME2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8093872070312	2	590.81079	1179.60703	0.522	0.0003084	-3.4822	-0.0020574	-2.9603	-0.0017489	590.8087294350913	59.786	1.1886	59.902	59.476	60.664	0.11676					102	40	3	0	0	0	0.20373	1	5161	5161		85.161	16.374	1	4726100	+		47250	16834	31807	31820	53304	53304					0.024408595199020056
REQPGRKLRR	10	Unmodified	_REQPGRKLRR_					0	0	0		ENST00000582437.1_1_18:72914218-72920414:-|nuORF	ENST00000582437.1_1_18:72914218-72920414:-|nuORF	ENST00000582437.1_1_18:72914218-72920414:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5975646972656	3	432.597088	1294.76943	-1.8326	-0.00079276	3.0618	0.0013245	1.2292	0.00053177	432.5983701682112	106.14	0.94881	106.2	105.74	106.69	0.053749					97	22	5	0	0	0	0.8505	1	11276	11276		18.531	5.0231	1	20584000			47251	14114	31808	31821	53305	53305					0.13384004036925035
REQTRAAL	8	Unmodified	_REQTRAAL_					0	0	0		ENSG00000232070|ENST00000556585|TMEM253	ENSG00000232070|ENST00000556585|TMEM253;REV__ENSG00000171467|ENST00000361428|ZNF318	REV__ENSG00000171467|ENST00000361428|ZNF318	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7667236328125	2	472.76724	943.519927	-0.10826	-5.1183E-05	-0.02496	-1.18E-05	-0.13322	-6.2983E-05	472.76709197007693	81.653	2.5573	81.717	80.353	82.91	0.064384					120	61	3	0	0	0	0.86791	1	8054	8054		28.254	0	1	144950			47252	21733;8738	31809	31822	53306	53306					0.045908213605116543
REQVALDQH	9	Unmodified	_REQVALDQH_					0	0	0			REV__nc|ENSG00000099849|Q02833-3|RASSF7	REV__nc|ENSG00000099849|Q02833-3|RASSF7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.2831420898438	2	548.280712	1094.54687	-1.4657	-0.00080363	2.0138	0.0011041	0.54805	0.00030048	548.281610390018	34.409	0.47747	34.409	34.138	34.615	0					16	11	2	0	0	0	0.66686	1	1842	1842		42.864	3.6114	1	58850	+		47253	17110	31810	31823	53307	53307					0.003378851810339256
REQVALDQH	9	Unmodified	_REQVALDQH_					0	0	0			REV__nc|ENSG00000099849|Q02833-3|RASSF7	REV__nc|ENSG00000099849|Q02833-3|RASSF7	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	548.280712	1094.54687	-1.4657	-0.00080363	2.0138	0.0011041	0.54805	0.00030048	548.281610390018	34.409	0.47747	34.409	34.138	34.615	0	-0.03544	0.00052198	NaN	42.864	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58850	+		47254	17110	31810	31823							0.003378851810339256
REQVALDQH	9	Unmodified	_REQVALDQH_					0	0	0			REV__nc|ENSG00000099849|Q02833-3|RASSF7	REV__nc|ENSG00000099849|Q02833-3|RASSF7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	548.280712	1094.54687	0.1566	8.5859E-05	0.28024	0.00015365	0.43684	0.00023951	548.2802659749749	34.536	0.27732	34.48	34.262	34.54	-0.056385	0.03544	-0.0013789	NaN	42.864	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13391	+		47255	17110	31810	31823							0.003378851810339256
RERETREWE	9	Unmodified	_RERETREWE_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	646.3140258789062	2	645.812907	1289.61126	-1.097	-0.00070848	0.14941	9.6492E-05	-0.94762	-0.00061199	645.8129719767265	26.17	0.35815	26.17	26.022	26.38	0					29	15	2	0	0	0	0.70638	1	986	986		40.058	0	1	61421	+		47256	23503	31811	31824	53308	53308					-0.021959597327850133
RERFCDKL	8	Carbamidomethyl (C)	_RERFC(Carbamidomethyl (C))DKL_	RERFC(1)DKL		RERFC(44)DKL		0	1	0			REV__chr13:37565496-37569300|35|15.66|0.76|4.37|-|0|POSTN,POSTN|1	REV__chr13:37565496-37569300|35|15.66|0.76|4.37|-|0|POSTN,POSTN|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.287841796875	2	562.287482	1122.56041	0.31099	0.00017487	-1.5683	-0.00088185	-1.2573	-0.00070698	562.2863310461746	65.939	0.91332	66.491	66.2	67.113	0.5526					43	24	2	0	0	0	0.91472	1	7230	7230		44.117	8.9648	1	344450	+		47257	15569	31812	31825	53309	53309	205				0.004034196886095742
RERFCDKL	8	Carbamidomethyl (C)	_RERFC(Carbamidomethyl (C))DKL_					0	1	0			REV__chr13:37565496-37569300|35|15.66|0.76|4.37|-|0|POSTN,POSTN|1	REV__chr13:37565496-37569300|35|15.66|0.76|4.37|-|0|POSTN,POSTN|1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	562.287482	1122.56041	0.5557	0.00031246	-1.5635	-0.00087914	-1.0078	-0.00056668	562.2865239668718	66.63	0.43244	66.756	66.592	67.024	0.1265	0.11508	-0.00012445	NaN	44.117	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	117460	+		47258	15569	31812	31825			205				0.004034196886095742
RERFCDKL	8	Carbamidomethyl (C)	_RERFC(Carbamidomethyl (C))DKL_					0	1	0			REV__chr13:37565496-37569300|35|15.66|0.76|4.37|-|0|POSTN,POSTN|1	REV__chr13:37565496-37569300|35|15.66|0.76|4.37|-|0|POSTN,POSTN|1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	562.287482	1122.56041	-0.65974	-0.00037096	-1.2335	-0.0006936	-1.8933	-0.0010646	562.2864165996734	66.837	0.46637	66.889	66.619	67.085	0.052368	0.24795	0.00024663	NaN	44.117	34	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124210	+		47259	15569	31812	31825			205				0.004034196886095742
RERFCDKL	8	Carbamidomethyl (C)	_RERFC(Carbamidomethyl (C))DKL_					0	1	0			REV__chr13:37565496-37569300|35|15.66|0.76|4.37|-|0|POSTN,POSTN|1	REV__chr13:37565496-37569300|35|15.66|0.76|4.37|-|0|POSTN,POSTN|1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	562.287482	1122.56041	0.71262	0.0004007	-1.2602	-0.00070859	-0.54757	-0.00030789	562.2862653847312	66.042	1.3085	66.428	65.991	67.3	0.38581	-0.21338	0.00021665	NaN	44.117	65	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	322600	+		47260	15569	31812	31825			205				0.004034196886095742
RERFCDKL	8	Carbamidomethyl (C)	_RERFC(Carbamidomethyl (C))DKL_					0	1	0			REV__chr13:37565496-37569300|35|15.66|0.76|4.37|-|0|POSTN,POSTN|1	REV__chr13:37565496-37569300|35|15.66|0.76|4.37|-|0|POSTN,POSTN|1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	562.287482	1122.56041	0.31099	0.00017487	-1.5683	-0.00088185	-1.2573	-0.00070698	562.2863310461746	65.939	0.91332	66.491	66.2	67.113	0.5526	-0.14966	-0.00012987	NaN	44.117	43	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	344450	+		47261	15569	31812	31825			205				0.004034196886095742
RERHKKLAT	9	Unmodified	_RERHKKLAT_					0	0	0			REV__ENST00000403291.1_1_6:160134476-160134596:-|nuORF	REV__ENST00000403291.1_1_6:160134476-160134596:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.8440551757812	2	569.843813	1137.67307	0.43191	0.00024612	1.0319	0.00058804	1.4638	0.00083416	569.8441380457228	68.763	1.1279	69.31	68.699	69.827	0.54693					60	26	3	0	0	0	0.75725	1	7600	7600		36.447	6.129	1	315050	+		47262	26274	31813	31826	53310	53310					0.10974436476999472
RERKQKRAHR	10	Unmodified	_RERKQKRAHR_					0	0	0			REV__ENSG00000089902|ENST00000262241|RCOR1	REV__ENSG00000089902|ENST00000262241|RCOR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6076965332031	3	455.607987	1363.80213	-0.55129	-0.00025117	1.5527	0.00070741	1.0014	0.00045624	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.81117	1	7122	7122		38.754	1.1537	1	1732400	+		47263	16979	31814	31827	53311	53311					0.13478211159781495
RERKRSRSKER	11	Unmodified	_RERKRSRSKER_					0	0	0		ENST00000492779.5_1_20:34292405-34320086:-|nuORF;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;nc|ENSG00000131051|Q14498-3|RBM39;ENSG00000131051|ENST00000253363|RBM39;nc|ENSG00000131051|Q14498-2|RBM39;ENST00000442447.5_1_20:34319864-34322136:-|nuORF	ENST00000492779.5_1_20:34292405-34320086:-|nuORF	ENST00000492779.5_1_20:34292405-34320086:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	496.2918701171875	3	496.625706	1486.85529	0.79912	0.00039687	2.6616	0.0013218	3.4608	0.0017187	496.6269753668557	101.93	0.46758	102.07	101.72	102.18	0.13523					14	10	2	0	0	0	0.18209	1	10700	10700		11.455	5.7558	1	70404			47264	3712	31815	31828	53312	53312					0.13133544151787646
RERLMRRRKRR	11	Unmodified	_RERLMRRRKRR_					0	0	0			REV__nc|ENSG00000131149|Q14687-2|GSE1	REV__nc|ENSG00000131149|Q14687-2|GSE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9293212890625	4	404.002388	1611.98045	0.48656	0.00019657	3.1106	0.0012567	3.5972	0.0014533	404.0038010679515	45.422	0.5299	45.885	45.635	46.165	0.46313					16	12	2	0	0	0	0.18343	1	4207	4207		5.4129	2.5611	1	145910	+		47265	18937	31816	31829	53313	53313					0.19893557807154139
RERPLNVFW	9	Unmodified	_RERPLNVFW_					0	0	0		ENST00000507684.1_1_6:31976393-31978991:-|nuORF	ENST00000507684.1_1_6:31976393-31978991:-|nuORF	ENST00000507684.1_1_6:31976393-31978991:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.836669921875	2	608.832914	1215.65128	3.145	0.0019148	3.5662	0.0021712	6.7112	0.004086	608.8349484484327	110.59	1.437	110.57	110.28	111.71	-0.027641					106	45	4	0	0	0	0.78058	1	12228	12228		30.504	2.6214	1	3029200			47266	12962	31817	31830	53314	53314					0.05207631728421802
RERPPAGG	8	Unmodified	_RERPPAGG_					0	0	0			REV__nc|ENSG00000176909|Q6ZN01-2|MAMSTR	REV__nc|ENSG00000176909|Q6ZN01-2|MAMSTR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22711181640625	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.89457	1	7125	7125		37.028	7.1869	1	419890	+		47267	22155	31818	31831	53315	53315					0.015265941262327942
RERPRRPPP	9	Unmodified	_RERPRRPPP_					0	0	0			REV__nc|ENSG00000099625|Q8N350-4|CBARP	REV__nc|ENSG00000099625|Q8N350-4|CBARP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.8408203125	2	580.841605	1159.66866	0.60129	0.00034925	-2.4927	-0.0014479	-1.8914	-0.0010986	580.839949137506	69.631	0.83281	69.76	69.457	70.29	0.1291					104	40	3	0	0	0	0.78536	1	6331	6331		29.15	7.1897	1	14222000	+		47268	29734	31819	31832	53316	53316					0.09520972054087906
RERQDRARPK	10	Unmodified	_RERQDRARPK_					0	0	0			REV__ENSG00000126653|ENST00000247026|NSRP1	REV__ENSG00000126653|ENST00000247026|NSRP1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2631530761719	3	437.916597	1310.72796	-1.8401	-0.00080579	-4.329	-0.0018958	-6.1691	-0.0027015	438.2492980618917	42.843	0.6165	42.843	42.644	43.26	0					17	14	2	0	0	0	0.37624	1	2976	2976		17.833	4.8757	1	49932	+		47269	18708	31820	31833	53317	53317					0.08502823277581228
RERRKKRVPKK	11	Unmodified	_RERRKKRVPKK_					0	0	0		ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3278503417969	3	494.32682	1479.95863	0.75213	0.0003718	0.93126	0.00046035	1.6834	0.00083214	494.32727971408536	15.362	0.29456	15.337	15.23	15.524	-0.024207					22	9	3	0	0	0	0.79476	1	25	25		12.433	1.846	1	451070			47270	3560	31821	31834	53318	53318					0.2378507633022764
RERRRQRLRHV	11	Unmodified	_RERRRQRLRHV_					0	0	0			REV__nc|ENSG00000070413|P98153-2|DGCR2	REV__nc|ENSG00000070413|P98153-2|DGCR2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	520.649658203125	3	521.317207	1560.92979	3.1778	0.0016567	-1.1366	-0.00059254	2.0412	0.0010641	521.3166504514945	112.32	0.50905	112.3	112.19	112.69	-0.025414					16	10	2	0	0	0	0.18386	1	12412	12412		5.6988	2.2901	1	546080	+		47271	16602	31822	31835	53319	53319					0.171763517538011
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7689514160156	2	470.769783	939.525013	-1.6346	-0.00076952	0.1281	6.0304E-05	-1.5065	-0.00070922	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.47272	1	4075	4075		53.351	0.41475	1	1359900	+		47272	26115	31823	31836	53320	53320					0.05283125223149909
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7689208984375	2	470.769783	939.525013	-1.6002	-0.00075333	-0.071841	-3.3821E-05	-1.6721	-0.00078715	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.64922	1	4389	4389		44.117	1.7207	1	1490800	+		47273	26115	31823	31836	53321	53321					0.05283125223149909
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7685852050781	2	470.769783	939.525013	-1.0178	-0.00047915	-1.0022	-0.0004718	-2.02	-0.00095095	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.25483	1	4300	4300		68.787	14.011	1	1648400	+		47274	26115	31823	31836	53322	53322					0.05283125223149909
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.76922607421875	2	470.769783	939.525013	-1.0146	-0.00047764	-0.29264	-0.00013777	-1.3072	-0.0006154	470.7694800096645	54.93	1.6163	54.986	54.192	55.809	0.055611					122	53	3	0	0	0	0.47272	1	4579	4579		53.351	3.9099	1	2574100	+		47275	26115	31823	31836	53323	53323					0.05283125223149909
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7689514160156	2	470.769783	939.525013	0.3235	0.00015229	-1.7498	-0.00082374	-1.4263	-0.00067145	470.7688399761902	50.705	1.3688	50.755	50.372	51.741	0.049896					94	42	3	0	0	0	0.47272	1	4004	4004		53.351	7.3792	1	1304900	+		47276	26115	31823	31836	53324	53324					0.05283125223149909
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76885986328125	2	470.769783	939.525013	0.25998	0.00012239	-1.8077	-0.000851	-1.5477	-0.00072861	470.7687399956873	50.307	1.239	50.754	50.307	51.546	0.4476					93	29	5	0	0	0	0.47272	3	5009	5009;5021;5033		53.351	5.6941	1	9098100	+		47277	26115	31823	31836	53325;53326;53327	53325					0.05283125223149909
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7695007324219	2	470.769783	939.525013	-0.26642	-0.00012542	-1.5501	-0.00072973	-1.8165	-0.00085516	470.76897416042203	52.548	1.7695	52.972	52.234	54.003	0.42348					108	42	4	0	0	0	0.47272	1	5212	5212		53.351	2.016	1	18288000	+		47278	26115	31823	31836	53328	53328					0.05283125223149909
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76904296875	2	470.769783	939.525013	-0.23699	-0.00011157	-1.3396	-0.00063064	-1.5766	-0.00074221	470.7690852138792	80.179	2.0778	80.595	78.892	80.97	0.41621					101	48	4	0	0	0	0.31972	1	9177	9177		63.306	1.1989	1	1333300	+		47279	26115	31823	31836	53329	53329					0.05283125223149909
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76910400390625	2	470.769783	939.525013	-0.31282	-0.00014727	-1.012	-0.00047641	-1.3248	-0.00062368	470.7690962660208	80.864	0.77295	81.286	80.933	81.706	0.4215					52	18	4	0	0	0	0.30689	2	9310	9286;9310		64.207	5.4305	1	1358000	+		47280	26115	31823	31836	53330;53331	53331					0.05283125223149909
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7691345214844	2	470.769783	939.525013	-0.65478	-0.00030825	-0.88303	-0.00041571	-1.5378	-0.00072396	470.7692226833795	80.078	1.5697	80.605	79.423	80.992	0.52676					81	36	3	0	0	0	0.10807	1	9229	9229		90.777	17.897	1	1102700	+		47281	26115	31823	31836	53332	53332					0.05283125223149909
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	470.769783	939.525013	-0.96669	-0.00045509	-0.55568	-0.0002616	-1.5224	-0.00071668	470.7693738989326	81.152	1.2036	81.297	80.325	81.529	0.14513	0.018596	0.00050357	NaN	64.207	42	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128750	+		47282	26115	31823	31836							0.05283125223149909
RERVVGAPG	9	Unmodified	_RERVVGAPG_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	470.769783	939.525013	0.59445	0.00027985	-2.436	-0.0011468	-1.8415	-0.00086693	470.76852010801923	81.068	1.2532	81.211	80.289	81.543	0.14352	-0.066827	-0.0012668	NaN	64.207	63	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85646	+		47283	26115	31823	31836							0.05283125223149909
RESEYKQVY	9	Unmodified	_RESEYKQVY_					0	0	0		ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.2962646484375	2	601.296027	1200.5775	-0.69305	-0.00041673	0.50933	0.00030626	-0.18372	-0.00011047	601.2963589933263	28.526	0.67548	28.506	28.214	28.89	-0.019922					33	16	3	0	0	0	0.44529	1	1364	1364		54.722	14.664	1	78653			47284	1334	31824	31837	53333	53333					-0.014763812245746522
RESISSCPS	9	Unmodified	_RESISSCPS_					0	0	0			REV__chr13:42574522-42581126|28|19.07|0.48|5.3|+|1|TNFSF11,TNFSF11|1	REV__chr13:42574522-42581126|28|19.07|0.48|5.3|+|1|TNFSF11,TNFSF11|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.2375183105469	2	483.221474	964.428395	0.19729	9.5336E-05	0.58375	0.00028208	0.78104	0.00037742	483.2213117451654	39.899	0.23804	39.869	39.694	39.932	-0.03027					9	5	2	0	0	0	0.20789	1	2794	2794		30.504	8.5438	1	108810	+		47285	15570	31825	31838	53334	53334					-0.055242301189764476
RESKFSYH	8	Unmodified	_RESKFSYH_					0	0	0		ENST00000257724.7_1_7:114657703-114657775:+|nuORF	ENST00000257724.7_1_7:114657703-114657775:+|nuORF	ENST00000257724.7_1_7:114657703-114657775:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.2583618164062	2	527.259248	1052.50394	0.66214	0.00034912	-4.467	-0.0023553	-3.8049	-0.0020062	527.2567706615374	25.253	0.8396	25.303	24.898	25.737	0.050451					79	32	4	0	0	0	0.89679	1	973	973		37.812	3.639	1	313920			47286	9358	31826	31839	53335	53335					-0.02020884876378659
RESVLQKIRA	10	Unmodified	_RESVLQKIRA_					0	0	0		ENSG00000160957|ENST00000617875|RECQL4	ENSG00000160957|ENST00000617875|RECQL4	ENSG00000160957|ENST00000617875|RECQL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5799255371094	3	400.578811	1198.7146	3.4037	0.0013634	1.0118	0.0004053	4.4155	0.0017688	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.8573	1	13688	13688		16.007	0	1	5321000			47287	5619	31827	31840	53336	53336					0.12319572445653648
RETEDDVIE	9	Unmodified	_RETEDDVIE_					0	0	0		nc|ENSG00000123427|Q96AZ1-2|EEF1AKMT3	nc|ENSG00000123427|Q96AZ1-2|EEF1AKMT3	nc|ENSG00000123427|Q96AZ1-2|EEF1AKMT3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8134155273438	2	553.254025	1104.4935	1.3969	0.00077283	-1.5851	-0.00087697	-0.18824	-0.00010415	553.2530983030535	27.364	0.42497	27.109	26.9	27.325	-0.25465					16	9	2	0	0	0	0.20789	1	1556	1556		35.618	0	1	101650			47288	14883	31828	31841	53337	53337					-0.05456957112164673
RETLAPSLLLV	11	Unmodified	_RETLAPSLLLV_					0	0	0		nc|ENSG00000168781|Q6PFW1-5|PPIP5K1;nc|ENSG00000168781|Q6PFW1-4|PPIP5K1;nc|ENSG00000168781|Q6PFW1-3|PPIP5K1;nc|ENSG00000168781|Q6PFW1-2|PPIP5K1;nc|ENSG00000168781|Q6PFW1|PPIP5K1;ENSG00000168781|ENST00000420765|PPIP5K1;nc|ENSG00000168781|Q6PFW1-6|PPIP5K1;ENST00000488768.5_1_15:43865553-43876720:-|nuORF;nc|ENSG00000168781|Q6PFW1-7|PPIP5K1	nc|ENSG00000168781|Q6PFW1-5|PPIP5K1	nc|ENSG00000168781|Q6PFW1-5|PPIP5K1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	606.3695068359375	2	606.371538	1210.72852	0.84903	0.00051483	-4.1925	-0.0025422	-3.3434	-0.0020274	606.3688643769136	94.076	3.4223	94.237	93.324	96.746	0.16118					202	81	3	0	0	0	0.69995	1	9652	9652		31.53	2.3598	1	934800			47289	6435	31829	31842	53338	53338					0.13158805154080255
RETLKFVK	8	Unmodified	_RETLKFVK_					0	0	0		nc|ENSG00000087263|Q8N543-2|OGFOD1;ENSG00000087263|ENST00000566157|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.81195068359375	2	510.813659	1019.61277	2.0738	0.0010593	-3.4035	-0.0017386	-1.3297	-0.00067922	510.811728357041	106.1	0.82207	106.22	105.9	106.72	0.12742					79	35	3	0	0	0	0.91977	1	12956	12956		45.952	7.1458	1	1055000			47290	1573	31830	31843	53339	53339					0.10374326093904074
RETNNVIVGG	10	Unmodified	_RETNNVIVGG_					0	0	0			REV__ENST00000589241.5_1_17:73851318-73851408:-|nuORF	REV__ENST00000589241.5_1_17:73851318-73851408:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7808837890625	2	529.783087	1057.55162	0.45896	0.00024315	-4.1034	-0.0021739	-3.6444	-0.0019308	529.7806261653575	52.825	1.5318	53.249	52.638	54.169	0.42348					117	36	6	0	0	0	0.73395	1	5297	5297		42.864	3.6114	1	6482700	+		47291	29127	31831	31844	53340	53340					0.025147693238068314
REVCTVLPGD	10	Carbamidomethyl (C)	_REVC(Carbamidomethyl (C))TVLPGD_	REVC(1)TVLPGD		REVC(41)TVLPGD		0	1	0			REV__ENST00000497521.5_1_3:133407124-133418814:+|nuORF	REV__ENST00000497521.5_1_3:133407124-133418814:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.285888671875	2	573.284605	1144.55466	0.38627	0.00022144	3.171	0.0018179	3.5573	0.0020393	573.2863016098212	20.64	0.98573	20.181	19.732	20.718	-0.4591					47	22	4	0	0	0	0.76096	1	697	697		41.427	9.4718	1	277750	+		47292	27637	31832	31845	53341	53341	338				-0.011837236136898355
REVGKMGGC	9	Unmodified	_REVGKMGGC_					0	0	0			REV__nc|ENSG00000183718|Q96A61-2|TRIM52	REV__nc|ENSG00000183718|Q96A61-2|TRIM52	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7226867675781	2	468.723129	935.431706	-1.2296	-0.00057635	1.4404	0.00067517	0.21082	9.8818E-05	468.7238369987016	86.792	1.5636	87.247	86.655	88.219	0.4543					99	37	4	0	0	0	0.74721	1	10184	10184		37.159	3.6435	1	4103600	+		47293	30088	31833	31846	53342	53342					-0.03859258545958255
REVGRPGGL	9	Unmodified	_REVGRPGGL_					0	0	0		ENST00000418994.1_1_3:15247725-15252361:+|nuORF	ENST00000418994.1_1_3:15247725-15252361:+|nuORF	ENST00000418994.1_1_3:15247725-15252361:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76898193359375	2	470.769783	939.525013	-1.6346	-0.00076952	0.1281	6.0304E-05	-1.5065	-0.00070922	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.71772	1	4113	4113		39.253	1.4413	1	1359900			47294	11435	31834	31847	53343	53343					0.052831252231385406
REVLPGPL	8	Unmodified	_REVLPGPL_					0	0	0			REV__ENST00000376741.4_1_17:46005196-46005520:+|nuORF	REV__ENST00000376741.4_1_17:46005196-46005520:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.76605224609375	2	440.766178	879.517802	-0.76695	-0.00033804	1.196	0.00052714	0.42902	0.0001891	440.76652816860985	35.673	1.0842	35.617	35.25	36.334	-0.055904					63	23	4	0	0	0	0.92973	1	2345	2345		50.025	0	1	450250	+		47295	25843	31835	31848	53344	53344					0.07322392622711504
REVLVPAP	8	Unmodified	_REVLVPAP_					0	0	0		nc|ENSG00000057657|O75626-3|PRDM1;nc|ENSG00000057657|O75626-2|PRDM1;ENSG00000057657|ENST00000369096|PRDM1	nc|ENSG00000057657|O75626-3|PRDM1	nc|ENSG00000057657|O75626-3|PRDM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.766357421875	2	440.766178	879.517802	-0.76695	-0.00033804	1.196	0.00052714	0.42902	0.0001891	440.76652816860985	35.673	1.0842	35.617	35.25	36.334	-0.055904					63	23	4	0	0	0	0.87276	1	2352	2352		29.842	3.0454	1	450250			47296	1039	31836	31849	53345	53345					0.07322392622711504
REVPVISA	8	Unmodified	_REVPVISA_					0	0	0		ENSG00000136492|ENST00000259008|BRIP1;nc|ENSG00000136492|Q9BX63-2|BRIP1	ENSG00000136492|ENST00000259008|BRIP1	ENSG00000136492|ENST00000259008|BRIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.75372314453125	2	435.75581	869.497067	0.32717	0.00014257	-3.8531	-0.001679	-3.5259	-0.0015364	435.75338117519266	81.61	2.2798	82.11	81.744	84.024	0.49966					68	55	2	0	0	0	0.87479	1	9440	9440		30.504	1.3541	1	343320			47297	4115	31837	31850	53346	53346					0.0570980224304094
REVRLLTG	8	Unmodified	_REVRLLTG_					0	0	0			REV__ENST00000536836.1_1_12:31458043-31479021:-|nuORF	REV__ENST00000536836.1_1_12:31458043-31479021:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28851318359375	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.8347	1	12329	12329		23.042	0	1	3080300	+		47298	28415	31838	31851	53347	53347					0.0874858239999412
REVRQQQAKQ	10	Unmodified	_REVRQQQAKQ_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.5720520019531	3	424.237337	1269.69018	0.31575	0.00013395	2.263	0.00096006	2.5788	0.001094	424.23799526801355	19.023	0.56054	18.394	18.15	18.711	-0.6296					33	12	4	0	0	0	0.86409	1	464	464		25.126	0.89417	1	111400	+		47299	18069	31839	31852	53348	53348					0.06612312292122624
REVSILSLH	9	Unmodified	_REVSILSLH_					0	0	0			REV__ENSG00000110756|ENST00000349215|HPS5	REV__ENSG00000110756|ENST00000349215|HPS5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.31396484375	2	527.306198	1052.59784	1.242	0.00065492	-3.6616	-0.0019308	-2.4196	-0.0012758	527.3046705662339	99.127	1.5298	99.174	98.632	100.16	0.047523					112	35	4	0	0	0	0.76255	1	10562	10562		35.618	6.4482	1	1549600	+		47300	17830	31840	31853	53349	53349					0.07364834225927552
REVTTLRN	8	Unmodified	_REVTTLRN_					0	0	0		nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;ENSG00000105357|ENST00000642316|MYH14;ENST00000597072.1_1_19:50812261-50812477:+|nuORF	nc|ENSG00000105357|Q7Z406-4|MYH14	nc|ENSG00000105357|Q7Z406-4|MYH14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7803649902344	2	494.780348	987.546142	-0.60063	-0.00029718	0.65872	0.00032592	0.05809	2.8742E-05	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.87479	1	8376	8376		30.504	1.3541	1	707910			47301	2207	31841	31854	53350	53350					0.051870905319901794
REVVRPGG	8	Unmodified	_REVVRPGG_					0	0	0			REV__ENSG00000176595|ENST00000320248|KBTBD11	REV__ENSG00000176595|ENST00000320248|KBTBD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25189208984375	2	435.251226	868.487899	1.6601	0.00072257	-1.6819	-0.00073205	-0.021767	-9.474E-06	435.25040422889157	93.013	2.1505	92.951	91.863	94.014	-0.06144					107	50	3	0	0	0	0.87922	1	9829	9829		31.955	4.0726	1	812220	+		47302	22137	31842	31855	53351	53351					0.04839453677391248
REVVRPGG	8	Unmodified	_REVVRPGG_					0	0	0			REV__ENSG00000176595|ENST00000320248|KBTBD11	REV__ENSG00000176595|ENST00000320248|KBTBD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2528076171875	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87064	1	7442	7442		29.15	0.89528	1	3370400	+		47303	22137	31842	31855	53352	53352					0.04839453677391248
REVYSDDL	8	Unmodified	_REVYSDDL_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.7362060546875	2	498.735271	995.45599	0.95568	0.00047663	2.3503	0.0011722	3.306	0.0016488	498.73627473351064	20.56	0.34136	20.628	20.438	20.78	0.068251					23	14	2	0	0	0	0.90523	1	497	497		40.778	10.275	1	34697	+		47304	21174	31843	31856	53353	53353					-0.04192003587104409
REYVRWMMYWI	11	Unmodified	_REYVRWMMYWI_					0	0	0		ENSG00000168476|ENST00000306306|REEP4;ENST00000519875.1_1_8:21997686-21998995:-|nuORF;nc|ENSG00000168476|Q9H6H4-2|REEP4;ENST00000519074.5_1_8:21996670-21998995:-|nuORF	ENSG00000168476|ENST00000306306|REEP4	ENSG00000168476|ENST00000306306|REEP4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.9326782226562	3	544.93198	1631.77411	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.483	1	19.014	18.514	19.514	-0.46967								0	0	0	0.56276	1	523	523		3.6191	0	1				47305	6403	31844	31857	53354	53354					-0.016506159268374176
REYYRDYDRWK	11	Unmodified	_REYYRDYDRWK_					0	0	0			REV__ENSG00000091009|ENST00000265271|RBM27	REV__ENSG00000091009|ENST00000265271|RBM27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.6008911132812	3	550.598823	1648.77464	0.48693	0.0002681	3.7202	0.0020483	4.2071	0.0023164	550.6008568284933	18.08	0.56966	18.156	17.968	18.538	0.075441					48	16	5	0	0	0	0.8498	1	261	261		6.001	2.5923	1	241290	+		47306	17003	31845	31858	53355	53355					-0.02379781681793247
REYYRDYDRWK	11	Unmodified	_REYYRDYDRWK_					0	0	0			REV__ENSG00000091009|ENST00000265271|RBM27	REV__ENSG00000091009|ENST00000265271|RBM27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.9319458007812	3	550.598823	1648.77464	0.29436	0.00016207	3.9508	0.0021753	4.2452	0.0023374	550.6010461865411	18.389	0.63671	18.312	18.121	18.758	-0.07671					40	17	4	0	0	0	0.8398	2	326	316;326		6.6596	4.4781	1	246790	+		47307	17003	31845	31858	53356;53357	53357					-0.02379781681793247
REYYRDYDRWK	11	Unmodified	_REYYRDYDRWK_					0	0	0			REV__ENSG00000091009|ENST00000265271|RBM27	REV__ENSG00000091009|ENST00000265271|RBM27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.6008911132812	3	550.598823	1648.77464	1.0198	0.0005615	3.2906	0.0018118	4.3104	0.0023733	550.6005895742304	18.389	0.61923	18.31	18.07	18.689	-0.078943					52	24	3	0	0	0	0.80593	3	315	308;315;322		10.104	6.4848	1	179160	+		47308	17003	31845	31858	53358;53359;53360	53359					-0.02379781681793247
REYYRDYDRWK	11	Unmodified	_REYYRDYDRWK_					0	0	0			REV__ENSG00000091009|ENST00000265271|RBM27	REV__ENSG00000091009|ENST00000265271|RBM27	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.9353637695312	3	550.598823	1648.77464	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.707	1	18.632	18.132	19.132	-0.074974								0	0	0	0.56276	1	351	351		11.455	8.2433	1		+		47309	17003	31845	31858	53361	53361					-0.02379781681793247
REYYRDYDRWK	11	Unmodified	_REYYRDYDRWK_					0	0	0			REV__ENSG00000091009|ENST00000265271|RBM27	REV__ENSG00000091009|ENST00000265271|RBM27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.6007690429688	3	550.598823	1648.77464	-0.057816	-3.1833E-05	4.0592	0.002235	4.0014	0.0022032	550.6010595542077	18.815	1.0768	18.338	18.077	19.153	-0.47694					48	23	4	0	0	0	0.79716	1	456	456		11.932	2.2862	1	399640	+		47310	17003	31845	31858	53362	53362					-0.02379781681793247
REYYRDYDRWK	11	Unmodified	_REYYRDYDRWK_					0	0	0			REV__ENSG00000091009|ENST00000265271|RBM27	REV__ENSG00000091009|ENST00000265271|RBM27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.6005859375	3	550.598823	1648.77464	0.040051	2.2052E-05	4.1311	0.0022746	4.1711	0.0022966	550.6010798593529	19.046	0.92437	18.416	18.15	19.075	-0.62961					45	20	4	0	0	0	0.8398	1	471	471		6.6596	1.5172	1	424390	+		47311	17003	31845	31858	53363	53363					-0.02379781681793247
REYYRDYDRWK	11	Unmodified	_REYYRDYDRWK_					0	0	0			REV__ENSG00000091009|ENST00000265271|RBM27	REV__ENSG00000091009|ENST00000265271|RBM27	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	550.598823	1648.77464	-1.6543	-0.00091088	7.1835	0.0039552	5.5291	0.0030443	550.603162867451	18.45	0.16924	18.45	18.354	18.523	0	0.064119	0.0050906	NaN	11.932	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30621	+		47312	17003	31845	31858							-0.02379781681793247
REYYRDYDRWK	11	Unmodified	_REYYRDYDRWK_					0	0	0			REV__ENSG00000091009|ENST00000265271|RBM27	REV__ENSG00000091009|ENST00000265271|RBM27	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	550.598823	1648.77464	0.93467	0.00051463	2.5642	0.0014118	3.4988	0.0019264	550.6001205864178	18.362	0.15174	18.338	18.265	18.416	-0.024035	-0.04732	-0.0025396	NaN	11.932	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54886	+		47313	17003	31845	31858							-0.02379781681793247
RFAAAALL	8	Unmodified	_RFAAAALL_					0	0	0			REV__ENST00000485682.6_2_11:2422258-2422552:+|nuORF	REV__ENST00000485682.6_2_11:2422258-2422552:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7549133300781	2	416.755613	831.496673	0.047442	1.9772E-05	-1.1428	-0.00047629	-1.0954	-0.00045652	416.7550156148421	65.976	1.6616	66.528	65.948	67.61	0.5526					110	49	3	0	0	0	0.87807	1	7284	7284		31.579	1.0753	1	3875200	+		47314	27527	31846	31859	53364	53364					0.07418427313837128
RFAALAKFK	9	Unmodified	_RFAALAKFK_					0	0	0		ENST00000601772.1_1_19:19035054-19035967:+|nuORF;ENST00000601803.5_1_19:19032987-19035509:+|nuORF;nc|ENSG00000105671|Q9Y6V7-2|DDX49;ENST00000595858.5_1_19:19032475-19037138:+|nuORF;ENSG00000105671|ENST00000247003|DDX49	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3229370117188	2	526.324194	1050.63383	0.59853	0.00031502	0.45386	0.00023888	1.0524	0.0005539	526.3242977161077	75.26	1.7289	75.393	74.703	76.432	0.13207					66	49	2	0	0	0	0.78536	1	7040	7040		29.15	8.2026	1	82421			47315	2238	31847	31860	53365	53365					0.11054336193410563
RFATLFKI	8	Unmodified	_RFATLFKI_					0	0	0			REV__ENST00000485323.2_1_6:11738840-11768613:-|nuORF	REV__ENST00000485323.2_1_6:11738840-11768613:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.3056335449219	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.598	1	52.615	52.115	53.115	0.017487								0	0	0	0.29497	1	4592	4592		34.173	3.6689	1		+		47316	17902	31848	31861	53366	53366					0.0988724492780193
RFAVGLPAGT	10	Unmodified	_RFAVGLPAGT_					0	0	0			REV__ENST00000409031.5_3_2:130939329-130940025:-|nuORF	REV__ENST00000409031.5_3_2:130939329-130940025:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7791442871094	2	494.782359	987.550165	-0.075057	-3.7137E-05	-4.2464	-0.002101	-4.3214	-0.0021382	494.7801083626478	84.098	2.6315	84.165	82.573	85.204	0.067001					119	60	3	0	0	0	0.86218	1	8334	8334		32.812	1.2826	1	230560	+		47317	26329	31849	31862	53367	53367					0.05589180025708629
RFDSDVGEF	9	Unmodified	_RFDSDVGEF_					0	0	0		ENST00000469120.1_1_6:33043797-33048717:+|nuORF;ENST00000471184.5_1_6:33048250-33051373:+|nuORF;nc|ENSG00000232629|P05538-2|HLA-DQB2;ENSG00000223865|ENST00000418931|HLA-DPB1;ENSG00000232629|ENST00000437316|HLA-DQB2;ENSG00000196126|ENST00000360004|HLA-DRB1;nc|ENSG00000232629|P05538|HLA-DQB2	ENST00000469120.1_1_6:33043797-33048717:+|nuORF	ENST00000469120.1_1_6:33043797-33048717:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.2401733398438	2	536.240721	1070.46689	0.14351	7.6958E-05	-0.32986	-0.00017689	-0.18635	-9.9928E-05	536.2403637432138	53.545	0.95256	53.959	53.416	54.369	0.4139					48	22	3	0	0	0	0.33718	2	5417	5405;5417		62.107	5.3864	1	1390800			47318	8014	31850	31863	53368;53369	53369					-0.06552601212820264
RFEIWFRRRK	10	Unmodified	_RFEIWFRRRK_					0	0	0		ENST00000563969.5_1_16:67314567-67322708:+|nuORF;nc|ENSG00000196155|Q58EX7-2|PLEKHG4;ENSG00000196155|ENST00000379344|PLEKHG4	ENST00000563969.5_1_16:67314567-67322708:+|nuORF	ENST00000563969.5_1_16:67314567-67322708:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.6213073730469	3	498.624866	1492.85277	0.89929	0.00044841	-4.4836	-0.0022356	-3.5843	-0.0017872	498.62268617728625	21.451	1.1498	21.519	20.917	22.067	0.068251					65	41	2	0	0	0	0.888	1	605	605		11.097	1.4506	1	54885			47319	8019	31851	31864	53370	53370					0.12605740484764283
RFENGRFVYRI	11	Unmodified	_RFENGRFVYRI_					0	0	0		nc|ENSG00000187079|P28347-2|TEAD1;ENSG00000187079|ENST00000527636|TEAD1	nc|ENSG00000187079|P28347-2|TEAD1	nc|ENSG00000187079|P28347-2|TEAD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.2674255371094	3	486.265115	1455.77352	0.072577	3.5292E-05	3.6642	0.0017818	3.7368	0.0018171	486.2667986946802	33.044	0.78993	33.047	32.72	33.509	0.0030785					42	17	4	0	0	0	0.77205	1	1895	1895		17.167	0	1	234010			47320	7837	31852	31865	53371	53371					0.06386048739977923
RFEQLISRRPL	11	Unmodified	_RFEQLISRRPL_					0	0	0		ENST00000595288.5_1_19:7687207-7690948:-|nuORF;ENSG00000076924|ENST00000358368|XAB2	ENST00000595288.5_1_19:7687207-7690948:-|nuORF	ENST00000595288.5_1_19:7687207-7690948:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2828369140625	3	472.280765	1413.82047	0.77578	0.00036639	3.8274	0.0018076	4.6031	0.002174	472.2820799548474	101.83	1.6089	101.96	101.04	102.65	0.13523					79	39	4	0	0	0	0.76251	1	10651	10651		19.263	3.342	1	311620			47321	1368	31853	31866	53372	53372					0.13010908291130363
RFERKRRIKK	10	Unmodified	_RFERKRRIKK_					0	0	0			REV__ENSG00000130560|ENST00000371756|UBAC1	REV__ENSG00000130560|ENST00000371756|UBAC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.9708251953125	3	472.972266	1415.89497	-0.70224	-0.00033214	-2.1098	-0.00099786	-2.812	-0.00133	472.9712636412795	49.393	3.7524	49.369	48.706	52.459	-0.024033					207	93	4	0	0	0	0.86151	1	4261	4261		15.333	1.2471	1	1446100	+		47322	18882	31854	31867	53373	53373					0.20365715893149172
RFFYDFLWRDW	11	Unmodified	_RFFYDFLWRDW_					0	0	0		nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L;ENSG00000157060|ENST00000367547|SHCBP1L	nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.6024780273438	3	550.933254	1649.77793	-0.010115	-5.5727E-06	4.0793	0.0022474	4.0691	0.0022418	550.9354350624939	19.329	0.36517	18.86	18.609	18.974	-0.46967					13	7	2	0	0	0	0.1841	1	507	507		3.2113	0.35952	1	49198			47323	5408	31855	31868	53374	53374					-0.020964868371265766
RFGTTSPTK	9	Unmodified	_RFGTTSPTK_					0	0	0		ENST00000553700.5_2_14:31675086-31676852:-|nuORF	ENST00000553700.5_2_14:31675086-31676852:-|nuORF	ENST00000553700.5_2_14:31675086-31676852:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7691345214844	2	497.769448	993.524344	2.1837	0.001087	0.94386	0.00046982	3.1275	0.0015568	497.7697728239385	26.206	1.1075	25.866	25.53	26.637	-0.34035					61	24	4	0	0	0	0.24527	1	1458	1458		69.628	3.8245	1	2042700			47324	13706	31856	31869	53375	53375					0.02732285783417865
RFGVPVPL	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RFGVPVPL_					1	0	0			REV__ENST00000361545.9_1_7:73819550-73819868:+|nuORF	REV__ENST00000361545.9_1_7:73819550-73819868:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.77716064453125	2	463.776545	925.538538	-1.6269	-0.00075451	4.4605	0.0020687	2.8336	0.0013142	463.77871170676815	40.303	0.42848	40.892	40.721	41.149	0.58915					28	11	4	0	0	0	0.89567	1	3446	3446		57.453	12.922	1	7368700	+		47325	25504	31857	31870	53376	53376					0.07278983002356654
RFHQGDLD	8	Unmodified	_RFHQGDLD_					0	0	0			REV__ENSG00000147041|ENST00000297875|SYTL5	REV__ENSG00000147041|ENST00000297875|SYTL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.23388671875	2	494.235773	986.456993	0.86147	0.00042577	-1.0247	-0.00050645	-0.16324	-8.0677E-05	494.23506236337215	21.782	0.52663	21.847	21.611	22.138	0.064745					29	18	2	0	0	0	0.87922	1	615	615		31.955	7.7521	1	30883	+		47326	20047	31858	31871	53377	53377					-0.036777444275230664
RFIKSRNVSA	10	Unmodified	_RFIKSRNVSA_					0	0	0		nc|ENSG00000075413|P27448-8|MARK3	nc|ENSG00000075413|P27448-8|MARK3	nc|ENSG00000075413|P27448-8|MARK3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3434448242188	2	589.343646	1176.67274	-0.40075	-0.00023618	-0.79332	-0.00046754	-1.1941	-0.00070372	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.86272	1	9241	9241		24.519	0	1	4112500			47327	14779	31859	31872	53378	53378					0.09147016757151505
RFIQVGVI	8	Unmodified	_RFIQVGVI_					0	0	0		CON__Q3KUS7;ENST00000482312.1_1_6:31918808-31919804:+|nuORF;ENSG00000243649|ENST00000425368|CFB	CON__Q3KUS7;ENSG00000243649|ENST00000425368|CFB	CON__Q3KUS7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2900390625	2	466.28982	930.565087	-1.1838	-0.00055201	1.3476	0.00062836	0.16374	7.6351E-05	466.29033790400257	73.255	0.82825	73.643	73.291	74.119	0.38779					44	22	3	0	0	0	0.94132	1	8233	8233		54.765	2.4655	1	1844000		+	47328	618;8810	31860	31873	53379	53379					0.09702671893705883
RFIRRPSTTI	10	Unmodified	_RFIRRPSTTI_					0	0	0		ENSG00000108370|ENST00000262406|RGS9;ENST00000584234.5_1_17:63204097-63223522:+|nuORF;nc|ENSG00000108370|O75916-4|RGS9;nc|ENSG00000108370|O75916-5|RGS9	ENSG00000108370|ENST00000262406|RGS9	ENSG00000108370|ENST00000262406|RGS9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	623.8709716796875	2	623.872571	1245.73059	-1.2116	-0.00075585	-2.299	-0.0014343	-3.5106	-0.0021902	623.8710403744353	104.48	2.0404	104.58	104.1	106.14	0.093857					153	50	5	0	0	0	0.86718	1	11008	11008		27.882	2.4321	1	2931600			47329	2401	31861	31874	53380	53380					0.11755278682539938
RFKALAAQFV	10	Unmodified	_RFKALAAQFV_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8438110351562	2	575.840208	1149.66586	0.61103	0.00035186	4.0503	0.0023323	4.6613	0.0026842	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.74274	1	9529	9529		42.396	1.8235	1	6623700			47330	6228	31862	31875	53381	53381					0.09701703876521606
RFKGPVPHI	9	Unmodified	_RFKGPVPHI_					0	0	0			REV__ENSG00000138829|ENST00000262464|FBN2	REV__ENSG00000138829|ENST00000262464|FBN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8173217773438	2	525.813993	1049.61343	2.4203	0.0012726	0.45697	0.00024028	2.8772	0.0015129	525.8148344392195	106.1	1.1594	106.23	105.62	106.78	0.12742					80	45	3	0	0	0	0.77546	1	12966	12966		31.955	2.8053	1	143960	+		47331	19511	31863	31876	53382	53382					0.09061165533603344
RFKKKKKS	8	Unmodified	_RFKKKKKS_					0	0	0			REV__ENSG00000075340|ENST00000264436|ADD2;REV__nc|ENSG00000148700|Q9UEY8-2|ADD3	REV__ENSG00000075340|ENST00000264436|ADD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7553100585938	2	525.350743	1048.68693	-0.36086	-0.00018958	2.6174	0.0013751	2.2566	0.0011855	525.3531196453757	29.476	0.43349	29.447	29.214	29.647	-0.029207					13	9	2	0	0	0	0.4196	1	1867	1867		15.642	11.957	1	41909	+		47332	16709;20132	31864	31877	53383	53383					0.16453713976079598
RFKKSKSR	8	Unmodified	_RFKKSKSR_					0	0	0			REV__nc|ENSG00000118785|P10451-3|SPP1	REV__nc|ENSG00000118785|P10451-3|SPP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8200073242188	2	518.82235	1035.63015	-0.12817	-6.6495E-05	-3.888	-0.0020172	-4.0162	-0.0020837	518.8201606196009	48.341	0.8793	49.245	48.885	49.765	0.90424					60	21	4	0	0	0	0.87792	1	4683	4683		31.53	9.5699	1	3317100	+		47333	18327	31865	31878	53384	53384					0.11375666419553454
RFKKSRSK	8	Unmodified	_RFKKSRSK_					0	0	0			REV__CON__P31096	REV__CON__P31096	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8199462890625	2	518.82235	1035.63015	-0.12817	-6.6495E-05	-3.888	-0.0020172	-4.0162	-0.0020837	518.8201606196009	48.341	0.8793	49.245	48.885	49.765	0.90424					60	21	4	0	0	0	0.88601	1	4670	4670		34.173	3.6689	1	3317100	+	+	47334	15989	31866	31879	53385	53385					0.11375666419553454
RFKPLIANVR	10	Unmodified	_RFKPLIANVR_					0	0	0		chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	607.37646484375	2	607.380032	1212.74551	-0.20362	-0.00012367	-3.9289	-0.0023863	-4.1325	-0.00251	607.3775190247616	99.603	1.0221	99.603	99.222	100.24	0					43	24	2	0	0	0	0.86763	1	10082	10082		26.693	5.746	1	227100			47335	117	31867	31880	53386	53386					0.14764770550550566
RFKPLIANVR	10	Unmodified	_RFKPLIANVR_					0	0	0		chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	607.380032	1212.74551	2.8312	0.0017196	-7.0253	-0.004267	-4.1941	-0.0025474	607.3756305321192	99.299	1.1746	99.245	98.824	99.999	-0.053741	-0.10519	-0.0024717	NaN	26.693	50	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	534850			47336	117	31867	31880							0.14764770550550566
RFKPLIANVR	10	Unmodified	_RFKPLIANVR_					0	0	0		chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	607.380032	1212.74551	1.0872	0.00066035	-5.2428	-0.0031843	-4.1555	-0.002524	607.3766262265308	99.05	0.90021	99.273	98.964	99.864	0.22262	-0.077584	-0.00030627	NaN	26.693	40	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	169680			47337	117	31867	31880							0.14764770550550566
RFKPLIANVR	10	Unmodified	_RFKPLIANVR_					0	0	0		chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	607.380032	1212.74551	0.89331	0.00054258	-4.8445	-0.0029424	-3.9512	-0.0023999	607.3769535131341	99.113	0.91091	99.27	98.99	99.901	0.15659	-0.080707	0.00017753	NaN	26.693	35	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	180650			47338	117	31867	31880							0.14764770550550566
RFKPLIANVR	10	Unmodified	_RFKPLIANVR_					0	0	0		chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	607.380032	1212.74551	-1.2654	-0.0007686	-2.7769	-0.0016867	-4.0424	-0.0024553	607.3782217294122	99.251	0.91086	99.437	99.031	99.942	0.18582	0.086367	0.0026891	NaN	26.693	36	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143510			47339	117	31867	31880							0.14764770550550566
RFKPLIANVR	10	Unmodified	_RFKPLIANVR_					0	0	0		chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	607.380032	1212.74551	2.0479	0.0012438	-5.1348	-0.0031187	-3.0869	-0.0018749	607.3767768444008	98.941	1.1501	99.303	98.936	100.09	0.36136	-0.047843	-0.00017508	NaN	26.693	39	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	276650			47340	117	31867	31880							0.14764770550550566
RFKPLIANVR	10	Unmodified	_RFKPLIANVR_					0	0	0		chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	chr12:15217603-15218518|18|10.06|0.14|6.2|-|0|TE_info:L3,L3_dup33408,CR1,LINE,donor,-,15218518,15219229|RERG,None|7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	607.380032	1212.74551	1.8169	0.0011035	-4.9649	-0.0030156	-3.148	-0.001912	607.3768005650816	98.96	1.0273	99.323	98.933	99.961	0.36292	-0.027616	3.1311E-05	NaN	26.693	38	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	420910			47341	117	31867	31880							0.14764770550550566
RFLKEMLVK	9	Unmodified	_RFLKEMLVK_					0	0	0			REV__ENST00000547411.1_1_12:29302213-29449968:+|nuORF;REV__ENSG00000064763|ENST00000536681|FAR2	REV__ENST00000547411.1_1_12:29302213-29449968:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3539428710938	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.34	1	116.32	115.82	116.82	-0.02433								0	0	0	0.34348	1	12882	12882		16.473	0.83134	1		+		47342	28550;16484	31868	31881	53387	53387					0.1147980131870554
RFLKRPAM	8	Unmodified	_RFLKRPAM_					0	0	0		ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8035583496094	2	509.802571	1017.59059	-0.89954	-0.00045859	3.2332	0.0016483	2.3337	0.0011897	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.86791	2	8329	8329;8365		28.254	0	1	1874600			47343	14254	31869	31882	53388;53389	53388					0.08249823144478796
RFLKRPAM	8	Unmodified	_RFLKRPAM_					0	0	0		ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8037414550781	2	509.802571	1017.59059	1.253	0.0006388	1.0003	0.00050997	2.2534	0.0011488	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.86791	3	8796	8796;8986;9082		35.201	1.0282	1	3243500			47344	14254	31869	31882	53390;53391;53392	53390					0.08249823144478796
RFLKRPAM	8	Unmodified	_RFLKRPAM_					0	0	0		ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8038024902344	2	509.802571	1017.59059	0.22319	0.00011378	2.0258	0.0010327	2.249	0.0011465	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.88915	2	8915	8915;8952		35.201	2.3883	1	3453000			47345	14254	31869	31882	53393;53394	53393					0.08249823144478796
RFLKRPAM	8	Unmodified	_RFLKRPAM_					0	0	0		ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.80352783203125	2	509.802571	1017.59059	-0.37726	-0.00019233	2.5658	0.0013081	2.1885	0.0011157	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.88915	1	8650	8650		35.201	6.0512	1	3415500			47346	14254	31869	31882	53395	53395					0.08249823144478796
RFLKRPAM	8	Unmodified	_RFLKRPAM_					0	0	0		ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.80352783203125	2	509.802571	1017.59059	-1.541	-0.00078559	3.7909	0.0019326	2.2499	0.001147	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.86791	3	8513	8321;8513;8597		42.474	8.3019	1	2989000			47347	14254	31869	31882	53396;53397;53398	53397					0.08249823144478796
RFLKRPAM	8	Unmodified	_RFLKRPAM_					0	0	0		ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	ENST00000590210.1_1_19:38755508-38778604:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8038330078125	2	509.802571	1017.59059	0.31699	0.0001616	1.9222	0.00097995	2.2392	0.0011416	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.88915	2	10195	10195;10208		35.201	6.9464	1	2635100			47348	14254	31869	31882	53399;53400	53399					0.08249823144478796
RFLLLVILFL	10	Unmodified	_RFLLLVILFL_					0	0	0		nc|ENSG00000182271|Q6UXZ0-2|TMIGD1;ENSG00000182271|ENST00000328886|TMIGD1	nc|ENSG00000182271|Q6UXZ0-2|TMIGD1	nc|ENSG00000182271|Q6UXZ0-2|TMIGD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.9175415039062	2	623.917927	1245.8213	2.3391	0.0014594	-4.4207	-0.0027582	-2.0816	-0.0012987	623.9150348689084	109.89	1.4015	109.95	109.45	110.85	0.067932					103	58	2	0	0	0	0.91289	1	13291	13291		7.1934	0	1	709500			47349	7443	31870	31883	53401	53401					0.2082235467812552
RFLQKNIPWLL	11	Unmodified	_RFLQKNIPWLL_					0	0	0			REV__ENSG00000026652|ENST00000320285|AGPAT4	REV__ENSG00000026652|ENST00000320285|AGPAT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.62420654296875	3	476.62224	1426.84489	2.8112	0.0013399	0.24063	0.00011469	3.0518	0.0014546	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.80593	1	12541	12541		10.104	0	1	2689700	+		47350	16261	31871	31884	53402	53402					0.1485416844466272
RFLRRKLS	8	Unmodified	_RFLRRKLS_					0	0	0			REV__nc|ENSG00000137843|Q9NQU5-2|PAK6	REV__nc|ENSG00000137843|Q9NQU5-2|PAK6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3270263671875	2	538.345992	1074.67743	-0.15618	-8.4081E-05	-3.2321	-0.00174	-3.3883	-0.0018241	538.3439088273664	101.2	0.78057	101.23	100.84	101.62	0.031036					43	18	4	0	0	0	0.4196	1	10778	10778		17.365	11.444	1	986540	+		47351	19418	31872	31885	53403	53403					0.14307945690552515
RFLSKLNDP	9	Unmodified	_RFLSKLNDP_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.2977294921875	2	545.306198	1088.59784	0.09739	5.3107E-05	-0.15683	-8.5521E-05	-0.059441	-3.2413E-05	545.3060338932492	60.05	0.61361	60.144	59.8	60.414	0.094063					27	19	2	0	0	0	0.71772	1	5170	5170		39.253	0	1	133080	+		47352	30102	31873	31886	53404	53404					0.057088342259021374
RFLYQTLAG	9	Unmodified	_RFLYQTLAG_					0	0	0		ENST00000603284.1_1_8:77316524-77316740:+|nuORF	ENST00000603284.1_1_8:77316524-77316740:+|nuORF	ENST00000603284.1_1_8:77316524-77316740:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	534.7950439453125	2	534.795466	1067.57638	-0.31576	-0.00016887	0.13013	6.9592E-05	-0.18563	-9.9273E-05	534.7955123159545	57.932	0.73426	57.966	57.632	58.367	0.033905					46	20	3	0	0	0	0.51307	1	5284	5284		51.335	0	1	268290			47353	14422	31874	31887	53405	53405					0.045294491971844764
RFMRRRKR	8	Unmodified	_RFMRRRKR_					0	0	0		ENST00000391975.5_1_2:242194961-242195633:-|nuORF	ENST00000391975.5_1_2:242194961-242195633:-|nuORF	ENST00000391975.5_1_2:242194961-242195633:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.373046875	2	603.367267	1204.71998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.32	1	107.47	106.97	107.97	0.14929								0	0	0	0.29755	1	13134	13134		24.203	0	1				47354	11004	31875	31888	53406	53406					0.12581017547131523
RFNEKKTT	8	Unmodified	_RFNEKKTT_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense;REV__nc|ENSG999|O00370|L1_ORF2	REV__nc|ENSG999|O00370|L1_ORF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2814331054688	2	512.282723	1022.55089	-0.052062	-2.6671E-05	-2.6058	-0.0013349	-2.6579	-0.0013616	512.2812910993212	86.454	3.487	86.521	85.51	88.997	0.067436					149	81	2	0	0	0	0.86677	1	8826	8826		27.882	0	1	329990	+		47355	30321;29575	31876	31889	53407	53407					0.0405197467475773
RFPVPPDEPA	10	Unmodified	_RFPVPPDEPA_					0	0	0			REV__ENSG00000119559|ENST00000585675|C19orf25	REV__ENSG00000119559|ENST00000585675|C19orf25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.7921752929688	2	562.790381	1123.56621	-1.2112	-0.00068165	0.91574	0.00051537	-0.29545	-0.00016628	562.7910246246227	54.797	0.64039	54.79	54.481	55.121	-0.0077095					29	20	2	0	0	0	0.8608	1	4859	4859		34.173	1.3601	1	129910	+		47356	18359	31877	31890	53408	53408					0.009368414719347129
RFQDVLMSL	9	Unmodified	_RFQDVLMSL_					0	0	0		ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7965698242188	2	554.794609	1107.57467	0.2334	0.00012949	3.2054	0.0017783	3.4388	0.0019078	554.7962668415221	26.797	1.0384	26.759	26.435	27.473	-0.038523					39	24	2	0	0	0	0.71772	1	1240	1240		39.253	3.6345	1	326390			47357	6723	31878	31891	53409	53409					0.025180721169363096
RFRLVLIAEH	10	Unmodified	_RFRLVLIAEH_					0	0	0		ENSG00000154252|ENST00000192314|GAL3ST2	ENSG00000154252|ENST00000192314|GAL3ST2	ENSG00000154252|ENST00000192314|GAL3ST2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3829956054688	2	627.377489	1252.74043	6.5869	0.0041325	1.5558	0.00097609	8.1428	0.0051086	627.3783410585748	112.58	0.5701	112.61	112.27	112.84	0.032707					46	19	3	0	0	0	0.85694	1	13649	13649		21.96	0	1	89780			47358	5266	31879	31892	53410	53410					0.1241646668793237
RFRQQEAR	8	Unmodified	_RFRQQEAR_					0	0	0			REV__ENST00000592920.5_1_19:55652034-55658489:-|nuORF	REV__ENST00000592920.5_1_19:55652034-55658489:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.31640625	2	545.796863	1089.57917	-1.4659	-0.00080008	0.53401	0.00029146	-0.93188	-0.00050862	545.7971305717571	92.323	2.4952	92.508	91.448	93.943	0.18582					80	58	2	0	0	0	0.4196	1	9456	9456		15.642	0	1	122520	+		47359	17501	31880	31893	53411	53411					0.03796717374689251
RFRRVLMMK	9	Oxidation (M)	_RFRRVLMM(Oxidation (M))K_		RFRRVLM(0.126)M(0.874)K		RFRRVLM(-8.4)M(8.4)K	0	0	1			REV__ENSG00000177706|ENST00000313766|FAM20C	REV__ENSG00000177706|ENST00000313766|FAM20C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.24176025390625	3	418.242489	1251.70564	0.34366	0.00014373	-0.98531	-0.0004121	-0.64165	-0.00026837	418.24199984171395	17.362	0.69825	16.752	16.305	17.003	-0.6107					35	15	4	0	0	0	0.58668	1	240	240		47.657	6.2307	2	327120	+		47360	22227	31881	31894	53412	53412		335			0.08985184283983472
RFRVLGCLV	9	Unmodified	_RFRVLGCLV_					0	0	0		nc|ENSG00000165917|Q13702-2|RAPSN;ENSG00000165917|ENST00000298854|RAPSN	nc|ENSG00000165917|Q13702-2|RAPSN	nc|ENSG00000165917|Q13702-2|RAPSN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8170166015625	2	531.815679	1061.6168	1.2435	0.00066132	1.3407	0.00071299	2.5842	0.0013743	531.8162466604691	101.09	1.2403	101.14	100.73	101.97	0.044823					55	29	3	0	0	0	0.7932	1	10885	10885		26.796	4.8362	1	527610			47361	6137	31882	31895	53413	53413					0.08846092315957321
RFRVLWWRRRS	11	Unmodified	_RFRVLWWRRRS_					0	0	0		ENST00000307340.7_1_1:215963551-215972328:-|nuORF	ENST00000307340.7_1_1:215963551-215972328:-|nuORF	ENST00000307340.7_1_1:215963551-215972328:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.986572265625	3	539.983165	1616.92767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.29	1	105.44	104.94	105.94	0.15583								0	0	0	0.56276	1	12828	12828		6.3209	3.4691	1				47362	9872	31883	31896	53414	53414					0.14387923015988235
RFSGLSLVYLL	11	Unmodified	_RFSGLSLVYLL_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3766479492188	2	634.374081	1266.73361	2.1873	0.0013876	3.021	0.0019164	5.2083	0.003304	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.7144	1	13351	13351		29.17	1.2878	1	6886400			47363	2075	31884	31897	53415	53415					0.11091109016706469
RFSGLSLVYLL	11	Unmodified	_RFSGLSLVYLL_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3760375976562	2	634.374081	1266.73361	6.6613	0.0042258	-2.0557	-0.0013041	4.6056	0.0029217	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.60058	1	13384	13384		44.377	0	1	7041100			47364	2075	31884	31897	53416	53416					0.11091109016706469
RFSGLSLVYLL	11	Unmodified	_RFSGLSLVYLL_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3770751953125	2	634.374081	1266.73361	6.8434	0.0043413	-1.8757	-0.0011899	4.9677	0.0031514	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.7434	1	13847	13847		23.523	4.4192	1	75725			47365	2075	31884	31897	53417	53417					0.11091109016706469
RFSGYVILLIS	11	Unmodified	_RFSGYVILLIS_					0	0	0			REV__ENSG00000157837|ENST00000353487|SPPL3	REV__ENSG00000157837|ENST00000353487|SPPL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3768310546875	2	634.374081	1266.73361	1.4924	0.00094672	2.6452	0.0016781	4.1376	0.0026248	634.3756362582708	111.65	0.59207	111.76	111.45	112.04	0.11118					53	17	5	0	0	0	0.7342	1	12051	12051		25.574	0	1	27955000	+		47366	20568	31885	31898	53418	53418					0.11091109016729206
RFSKTEGGAR	10	Unmodified	_RFSKTEGGAR_					0	0	0		ENSG00000037280|ENST00000261937|FLT4;nc|ENSG00000037280|P35916-1|FLT4	ENSG00000037280|ENST00000261937|FLT4	ENSG00000037280|ENST00000261937|FLT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.796630859375	2	554.796529	1107.5785	-0.23484	-0.00013029	0.43375	0.00024064	0.1989	0.00011035	554.796558209616	26.745	0.66422	26.786	26.47	27.134	0.040833					48	20	4	0	0	0	0.44803	1	1154	1154		60.118	2.307	1	214690			47367	907	31886	31899	53419	53419					0.029018779349826218
RFTLLLAATG	10	Unmodified	_RFTLLLAATG_					0	0	0			REV__nc|ENSG00000131650|Q8NCW0-6|KREMEN2	REV__nc|ENSG00000131650|Q8NCW0-6|KREMEN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8173217773438	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.86348	1	8206	8206		31.53	0	1	859730	+		47368	15630	31887	31900	53420	53420					0.09498308748311501
RFTRHGKE	8	Unmodified	_RFTRHGKE_					0	0	0		ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7821044921875	2	515.780682	1029.54681	0.80887	0.0004172	2.2625	0.0011669	3.0713	0.0015841	515.7817509816016	15.945	0.44332	15.457	15.296	15.739	-0.48727					19	9	3	0	0	0	0.89043	1	63	63		35.618	0	1	223630			47369	7384	31888	31901	53421	53421					0.03321929971684767
RFVILHKVC	9	Unmodified	_RFVILHKVC_					0	0	0		ENST00000262430.5_1_16:83949618-83949660:+|nuORF	ENST00000262430.5_1_16:83949618-83949660:+|nuORF	ENST00000262430.5_1_16:83949618-83949660:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	557.8292236328125	2	557.831329	1113.6481	0.35884	0.00020017	-1.2703	-0.00070863	-0.91149	-0.00050846	557.8305500141807	100.81	1.6091	101.01	100.54	102.15	0.2058					76	38	3	0	0	0	0.77546	1	10546	10546		31.955	5.2619	1	1006700			47370	9439	31889	31902	53422	53422					0.09582665350080788
RFVKKKGK	8	Unmodified	_RFVKKKGK_					0	0	0			REV__ENST00000556641.5_1_14:99959014-99967243:+|nuORF	REV__ENST00000556641.5_1_14:99959014-99967243:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	495.94110107421875	2	495.832186	989.649819	-0.038385	-1.9032E-05	4.124	0.0020448	4.0856	0.0020258	495.8340880939127	43.444	1.01	43.394	42.64	43.65	-0.050308					34	24	2	0	0	0	0.4196	1	2898	2898		7.6903	0	1	106690	+		47371	28705	31890	31903	53423	53423					0.15458042430327623
RFVLTVFKLE	10	Unmodified	_RFVLTVFKLE_					0	0	0			REV__ENST00000493235.5_1_3:132036276-132056343:+|nuORF	REV__ENST00000493235.5_1_3:132036276-132056343:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.92230224609375	3	417.920174	1250.73869	3.1807	0.0013293	1.9124	0.00079924	5.0931	0.0021285	417.9209605426618	105.73	2.7025	105.77	104.99	107.7	0.038322					262	63	6	0	0	0	0.8505	1	11598	11598		13.508	0	1	23553000	+		47372	16205	31891	31904	53424	53424					0.123354128793153
RFVPQSPP	8	Unmodified	_RFVPQSPP_					0	0	0			REV__nc|ENSG00000204248|P13942-9|COL11A2	REV__nc|ENSG00000204248|P13942-9|COL11A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.254638671875	2	464.255977	926.497401	-0.76573	-0.00035549	-3.3334	-0.0015476	-4.0992	-0.0019031	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.90465	1	9917	9917		40.573	4.9543	1	1046600	+		47373	23471	31892	31905	53425	53425					0.031212219629082938
RFWRRRLRRP	10	Unmodified	_RFWRRRLRRP_					0	0	0			REV__ENST00000574110.5_1_19:30433210-30433438:+|nuORF	REV__ENST00000574110.5_1_19:30433210-30433438:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.3064270019531	3	500.307872	1497.90179	0.43261	0.00021644	-3.7106	-0.0018565	-3.278	-0.00164	500.3060463887944	16.64	0.93214	16.029	15.82	16.752	-0.6107					30	20	3	0	0	0	0.8573	1	153	153		16.007	1.9208	1	2118800	+		47374	28967	31893	31906	53426	53426					0.17275073564383092
RFYFLLYIFLP	11	Unmodified	_RFYFLLYIFLP_					0	0	0			REV__ENST00000593637.5_1_19:14640508-14674910:+|nuORF	REV__ENST00000593637.5_1_19:14640508-14674910:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.2868957519531	3	497.951475	1490.83259	-1.8811	-0.00093669	1.2278	0.00061139	-0.65329	-0.00032531	497.95200362159926	24.056	0.79183	24.056	23.674	24.466	0					97	33	4	0	0	0	0.78391	1	818	818		14.694	4.1069	1	192870	+		47375	17103	31894	31907	53427	53427					0.10681131981596081
RFYTLIPH	8	Unmodified	_RFYTLIPH_					0	0	0		ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226555150-226558263:-|nuORF	ENSG00000143799|ENST00000366794|PARP1	ENSG00000143799|ENST00000366794|PARP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7939453125	2	523.792727	1045.5709	1.1929	0.00062481	1.036	0.00054262	2.2288	0.0011674	523.7931742755334	19.706	1.4854	19.236	18.928	20.414	-0.46967					77	32	3	0	0	0	0.82464	1	619	619		21.702	0.7554	1	1002100			47376	4662	31895	31908	53428	53428					0.049937704053718335
RGAEAQAEATH	11	Unmodified	_RGAEAQAEATH_					0	0	0			REV__ENSG00000167967|ENST00000301727|E4F1	REV__ENSG00000167967|ENST00000301727|E4F1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	571.2748413085938	2	570.773251	1139.53195	-0.20834	-0.00011891	-3.48	-0.0019863	-3.6883	-0.0021052	570.7714135024667	59.12	1.8858	59.154	58.468	60.353	0.033905					84	53	2	0	0	0	0.69248	1	5451	5451		32.751	0.79567	1	117990	+		47377	21439	31896	31909	53429	53429					-0.03223606686947278
RGAEERRR	8	Unmodified	_RGAEERRR_					0	0	0			REV__ENST00000175091.4_1_2:20251387-20251465:-|nuORF	REV__ENST00000175091.4_1_2:20251387-20251465:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	515.2843017578125	2	515.286663	1028.55877	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.312	1	28.312	27.812	28.812	0								0	0	0	0.30045	1	1171	1171		40.573	3.4135	1		+		47378	24082	31897	31910	53430	53430					0.045635467148940734
RGAEMRSF	8	Unmodified	_RGAEMRSF_					0	0	0		ENST00000379441.7_1_12:56992027-56992288:-|nuORF	ENST00000379441.7_1_12:56992027-56992288:-|nuORF	ENST00000379441.7_1_12:56992027-56992288:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.7364501953125	2	477.234719	952.454884	0.69881	0.0003335	-0.20289	-9.6825E-05	0.49593	0.00023667	477.2321784897056	66.004	0.91444	66.389	66.11	67.024	0.38581					44	23	3	0	0	0	0.87064	1	7208	7208		29.15	1.2673	1	267160			47379	10892	31898	31911	53431	53431					-0.023244964369723675
RGAGITGAP	9	Unmodified	_RGAGITGAP_					0	0	0		ENST00000597488.1_1_10:104211754-104212027:+|nuORF	ENST00000597488.1_1_10:104211754-104212027:+|nuORF	ENST00000597488.1_1_10:104211754-104212027:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2258605957031	2	400.224677	798.434801	1.8836	0.00075385	2.9405	0.0011769	4.8241	0.0019307	400.22567128573456	34.872	1.5031	35.082	34.854	36.357	0.21003					89	38	3	0	0	0	0.74721	1	2729	2729		37.159	0	1	1257500			47380	14358	31899	31912	53432	53432					0.027520758947048307
RGAIKVLI	8	Unmodified	_RGAIKVLI_					0	0	0		ENSG00000007314|ENST00000435607|SCN4A	ENSG00000007314|ENST00000435607|SCN4A	ENSG00000007314|ENST00000435607|SCN4A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2998046875	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.7961	1	6753	6753		17.365	3.5896	1	1072400			47381	725	31900	31913	53433	53433					0.14627262273359065
RGAIKVLI	8	Unmodified	_RGAIKVLI_					0	0	0		ENSG00000007314|ENST00000435607|SCN4A	ENSG00000007314|ENST00000435607|SCN4A	ENSG00000007314|ENST00000435607|SCN4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3002014160156	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.81548	1	6821	6821		20.482	3.7769	1	1680500			47382	725	31900	31913	53434	53434					0.14627262273359065
RGAIPGQAPG	10	Unmodified	_RGAIPGQAPG_					0	0	0		nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1;ENSG00000204843|ENST00000628224|DCTN1	nc|ENSG00000204843|Q14203-2|DCTN1	nc|ENSG00000204843|Q14203-2|DCTN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.25518798828125	2	462.256508	922.498464	-1.3349	-0.00061706	-0.92978	-0.0004298	-2.2647	-0.0010469	462.2559286254501	47.157	0.42875	47.628	47.388	47.817	0.47139					16	9	2	0	0	0	0.86218	1	4479	4479		32.812	2.3088	1	698820			47383	8490	31901	31914	53435	53435					0.03411436331816731
RGALAPLLCL	10	Unmodified	_RGALAPLLCL_					0	0	0			REV__nc|ENSG00000189350|Q6ZUX3-3|TOGARAM2	REV__nc|ENSG00000189350|Q6ZUX3-3|TOGARAM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8088989257812	2	513.810062	1025.60557	-1.4174	-0.00072826	-0.72923	-0.00037469	-2.1466	-0.0011029	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.67608	1	3894	3894		45.952	15.448	1	1977600	+		47384	23081	31902	31915	53436	53436					0.09379270221802471
RGALGGTAP	9	Unmodified	_RGALGGTAP_					0	0	0		ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2253723144531	2	400.224677	798.434801	-0.90021	-0.00036028	3.7777	0.0015119	2.8775	0.0011517	400.22605803281857	41.083	1.6559	41.475	40.867	42.523	0.39209					92	45	3	0	0	0	0.76255	1	3575	3575		35.618	0	1	2260300			47385	6915	31903	31916	53437	53437					0.027520758947161994
RGALGGTAP	9	Unmodified	_RGALGGTAP_					0	0	0		ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2259826660156	2	400.224677	798.434801	1.1683	0.00046758	3.5853	0.0014349	4.7536	0.0019025	400.2259734207164	34.839	1.4569	35.22	34.977	36.434	0.3812					102	37	3	0	0	0	0.76255	1	2783	2783		35.618	2.1027	1	1604200			47386	6915	31903	31916	53438	53438					0.027520758947161994
RGALGGTAP	9	Unmodified	_RGALGGTAP_					0	0	0		ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	400.224677	798.434801	0.21023	8.414E-05	3.4425	0.0013778	3.6527	0.0014619	400.2259879926034	41.457	1.2203	41.426	41.236	42.457	-0.030991	-0.11334	-0.00041519	NaN	35.618	48	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254580			47387	6915	31903	31916							0.027520758947161994
RGALGGTAP	9	Unmodified	_RGALGGTAP_					0	0	0		ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	400.224677	798.434801	-1.2443	-0.00049799	4.4745	0.0017908	3.2302	0.0012928	400.226575316977	41.643	1.3021	41.603	41.407	42.709	-0.040134	0.063504	0.00041089	NaN	35.618	44	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	249730			47388	6915	31903	31916							0.027520758947161994
RGALGGTAP	9	Unmodified	_RGALGGTAP_					0	0	0		ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	400.224677	798.434801	1.3878	0.00055543	2.4089	0.0009641	3.7967	0.0015195	400.2256626617592	41.889	1.6146	41.892	41.587	43.201	0.0034142	0.35278	-0.0012425	NaN	35.618	53	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153700			47389	6915	31903	31916							0.027520758947161994
RGALLVKL	8	Unmodified	_RGALLVKL_					0	0	0		nc|nan|Q6P1S2-2|C3orf33;ENSG00000174928|ENST00000340171|C3orf33	nc|nan|Q6P1S2-2|C3orf33	nc|nan|Q6P1S2-2|C3orf33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3003234863281	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.82419	1	6567	6567		13.775	0	1	1819800			47390	6972	31904	31917	53439	53439					0.14627262273359065
RGALRPEAL	9	Unmodified	_RGALRPEAL_					0	0	0		ENST00000491235.1_1_X:153055507-153059775:-|nuORF	ENST00000491235.1_1_X:153055507-153059775:-|nuORF	ENST00000491235.1_1_X:153055507-153059775:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7961730957031	2	491.793258	981.571963	0.72275	0.00035544	4.2539	0.002092	4.9766	0.0024475	491.79524952616435	50.532	2.1367	51.283	50.465	52.601	0.75174					133	51	3	0	0	0	0.76764	1	5050	5050		34.173	5.9183	1	1359500			47391	12679	31905	31918	53440	53440					0.08043984774269575
RGALSEHIETQ	11	Unmodified	_RGALSEHIETQ_					0	0	0		nc|ENSG00000114654|Q9HA90|EFCC1;ENSG00000114654|ENST00000683648|EFCC1	nc|ENSG00000114654|Q9HA90|EFCC1	nc|ENSG00000114654|Q9HA90|EFCC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.215576171875	3	414.214198	1239.62076	1.3279	0.00055002	2.2505	0.00093217	3.5783	0.0014822	414.2150743373195	34.161	0.99127	34.371	34.024	35.016	0.21003					65	23	4	0	0	0	0.71207	1	2507	2507		26.753	0.86138	1	1141400			47392	2783	31906	31919	53441	53441					0.010538085527286967
RGALTPTK	8	Unmodified	_RGALTPTK_					0	0	0			REV__nc|ENSG00000196243|Q96LM1|LINC00615	REV__nc|ENSG00000196243|Q96LM1|LINC00615	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.30010986328125	2	422.255977	842.497401	-0.96535	-0.00040763	-3.6663	-0.0015481	-4.6317	-0.0019558	422.2537383080015	88.203	0.15546	88.667	88.595	88.75	0.46312					5	3	2	0	0	0	0.4196	1	10410	10410		29.15	16.943	1	26042	+		47393	30126	31907	31920	53442	53442					0.06985221962895594
RGALYTAHA	9	Unmodified	_RGALYTAHA_					0	0	0		nc|ENSG00000142102|Q32M88-2|PGGHG;ENST00000474221.5_1_11:289135-291269:+|nuORF;ENSG00000142102|ENST00000409548|PGGHG	nc|ENSG00000142102|Q32M88-2|PGGHG	nc|ENSG00000142102|Q32M88-2|PGGHG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3204345703125	2	480.256508	958.498464	-1.033	-0.00049609	-0.39911	-0.00019168	-1.4321	-0.00068777	480.256147169745	59.18	0.74281	59.734	59.456	60.199	0.55323					34	18	3	0	0	0	0.20789	1	6246	6246		53.351	14.545	1	599160			47394	4542	31908	31921	53443	53443					0.017554363318026844
RGAPAPLPR	9	Unmodified	_RGAPAPLPR_					0	0	0		ENST00000367157.4_2_1:205290701-205290866:-|nuORF	ENST00000367157.4_2_1:205290701-205290866:-|nuORF	ENST00000367157.4_2_1:205290701-205290866:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7821350097656	2	467.782693	933.550834	-1.2971	-0.00060674	1.367	0.00063947	0.069954	3.2723E-05	467.78318178495175	30.176	0.88393	30.205	29.876	30.76	0.028618					38	19	3	0	0	0	0.78058	1	1958	1958		30.504	3.7075	1	607830			47395	10536	31909	31922	53444	53444					0.08140019465406567
RGAPLNKN	8	Unmodified	_RGAPLNKN_					0	0	0			REV__ENSG00000145975|ENST00000274673|FAM217A	REV__ENSG00000145975|ENST00000274673|FAM217A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2518615722656	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.84341	1	8222	8222		24.203	1.1603	1	2823900	+		47396	19979	31910	31923	53445	53445					0.04839453677379879
RGAPLNKN	8	Unmodified	_RGAPLNKN_					0	0	0			REV__ENSG00000145975|ENST00000274673|FAM217A	REV__ENSG00000145975|ENST00000274673|FAM217A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2514343261719	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87479	1	7828	7828		30.504	2.2494	1	3370400	+		47397	19979	31910	31923	53446	53446					0.04839453677379879
RGAPPPRG	8	Unmodified	_RGAPPPRG_					0	0	0		nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR	nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000125944|O43390-4|HNRNPR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.23309326171875	2	404.232836	806.45112	-1.8204	-0.00073588	2.3521	0.00095079	0.53167	0.00021492	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.86288	1	8335	8335		26.796	0	1	4754100			47398	3429	31911	31924	53447	53447					0.040152018514731935
RGAQPLGAPG	10	Unmodified	_RGAQPLGAPG_					0	0	0			REV__ENST00000539367.5_1_11:72287653-72353469:-|nuORF	REV__ENST00000539367.5_1_11:72287653-72353469:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	462.2552185058594	2	462.256508	922.498464	-0.074127	-3.4265E-05	-1.5925	-0.00073613	-1.6666	-0.00077039	462.2555518247335	55.049	0.93565	55.041	54.521	55.456	-0.0077095					49	26	2	0	0	0	0.64457	1	4888	4888		47.657	6.449	1	295440	+		47399	28448	31912	31925	53448	53448					0.03411436331816731
RGAQPLGAPG	10	Unmodified	_RGAQPLGAPG_					0	0	0			REV__ENST00000539367.5_1_11:72287653-72353469:-|nuORF	REV__ENST00000539367.5_1_11:72287653-72353469:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	462.2550354003906	2	462.256508	922.498464	-0.41541	-0.00019202	-1.2789	-0.00059118	-1.6943	-0.0007832	462.25572507259955	50.691	0.91424	50.599	50.35	51.265	-0.091797					43	26	2	0	0	0	0.84112	1	3992	3992		37.159	4.3467	1	292570	+		47400	28448	31912	31925	53449	53449					0.03411436331816731
RGAQPLGAPG	10	Unmodified	_RGAQPLGAPG_					0	0	0			REV__ENST00000539367.5_1_11:72287653-72353469:-|nuORF	REV__ENST00000539367.5_1_11:72287653-72353469:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	462.256508	922.498464	-0.47911	-0.00022147	-1.1684	-0.00054012	-1.6475	-0.00076159	462.25574193935563	55.189	1.0474	55.163	54.613	55.66	-0.025955	-0.13058	0.00024581	NaN	47.657	42	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	333210	+		47401	28448	31912	31925							0.03411436331816731
RGAQPLGAPG	10	Unmodified	_RGAQPLGAPG_					0	0	0			REV__ENST00000539367.5_1_11:72287653-72353469:-|nuORF	REV__ENST00000539367.5_1_11:72287653-72353469:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	462.256508	922.498464	-0.12805	-5.9194E-05	-1.8283	-0.00084513	-1.9563	-0.00090432	462.2555786592735	55.025	0.54354	55.426	55.238	55.782	0.40101	0.13262	-0.00036421	NaN	47.657	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89363	+		47402	28448	31912	31925							0.03411436331816731
RGAQPLGAPG	10	Unmodified	_RGAQPLGAPG_					0	0	0			REV__ENST00000539367.5_1_11:72287653-72353469:-|nuORF	REV__ENST00000539367.5_1_11:72287653-72353469:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	462.256508	922.498464	-0.28912	-0.00013365	-2.2166	-0.0010247	-2.5057	-0.0011583	462.25527355031915	55.035	0.71284	55.604	55.153	55.866	0.56836	0.31036	-0.00072326	NaN	47.657	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113450	+		47403	28448	31912	31925							0.03411436331816731
RGARLGRGPP	10	Unmodified	_RGARLGRGPP_					0	0	0		ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8115844726562	2	518.809774	1035.60499	1.4633	0.00075919	-0.21234	-0.00011016	1.251	0.00064903	518.8094853315844	89.952	0.62448	90.403	90.239	90.863	0.45058					29	16	2	0	0	0	0.4892	1	10631	10631		56.721	1.2168	1	1149500			47404	12492	31913	31926	53450	53450					0.08861611616998744
RGARLGRGPP	10	Unmodified	_RGARLGRGPP_					0	0	0		ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	518.809774	1035.60499	-0.23869	-0.00012383	1.5204	0.00078881	1.2817	0.00066497	518.8104551072158	90.306	0.64938	90.519	90.211	90.861	0.21271	-0.016785	-0.00016185	NaN	56.721	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	209320			47405	12492	31913	31926							0.08861611616998744
RGARLGRGPP	10	Unmodified	_RGARLGRGPP_					0	0	0		ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	518.809774	1035.60499	0.72799	0.00037769	0.75558	0.000392	1.4836	0.00076969	518.8100314659484	90.497	0.57126	90.651	90.345	90.916	0.15388	0.11545	-0.00095546	NaN	56.721	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185620			47406	12492	31913	31926							0.08861611616998744
RGARLGRGPP	10	Unmodified	_RGARLGRGPP_					0	0	0		ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	518.809774	1035.60499	-1.5538	-0.0008061	3.0831	0.0015996	1.5294	0.00079346	518.8112998860189	90.397	0.69163	90.573	90.342	91.034	0.1758	0.037222	0.0014597	NaN	56.721	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	208770			47407	12492	31913	31926							0.08861611616998744
RGARLGRGPP	10	Unmodified	_RGARLGRGPP_					0	0	0		ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	ENST00000482723.1_1_17:72439553-72445018:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	518.809774	1035.60499	-1.4636	-0.00075931	3.032	0.001573	1.5684	0.0008137	518.811229385458	90.062	0.6598	90.533	90.273	90.932	0.47068	-0.0030628	0.0014066	NaN	56.721	30	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1033500			47408	12492	31913	31926							0.08861611616998744
RGARLIPSPPN	11	Unmodified	_RGARLIPSPPN_					0	0	0		ENST00000427845.5_1_3:184033190-184033298:+|nuORF	ENST00000427845.5_1_3:184033190-184033298:+|nuORF	ENST00000427845.5_1_3:184033190-184033298:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.342529296875	2	589.343646	1176.67274	-0.6745	-0.00039751	-0.65118	-0.00038377	-1.3257	-0.00078128	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.67778	1	9748	9748		35.152	0	1	16185000			47409	11585	31914	31927	53451	53451					0.09147016757151505
RGARLIPSPPN	11	Unmodified	_RGARLIPSPPN_					0	0	0		ENST00000427845.5_1_3:184033190-184033298:+|nuORF	ENST00000427845.5_1_3:184033190-184033298:+|nuORF	ENST00000427845.5_1_3:184033190-184033298:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3435668945312	2	589.343646	1176.67274	2.472	0.0014569	-3.7901	-0.0022337	-1.3181	-0.00077681	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.67778	2	10398	10120;10398		35.152	3.5805	1	16740000			47410	11585	31914	31927	53452;53453	53453					0.09147016757151505
RGARLIPSPPN	11	Unmodified	_RGARLIPSPPN_					0	0	0		ENST00000427845.5_1_3:184033190-184033298:+|nuORF	ENST00000427845.5_1_3:184033190-184033298:+|nuORF	ENST00000427845.5_1_3:184033190-184033298:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3425903320312	2	589.343646	1176.67274	-1.324	-0.00078029	-0.19058	-0.00011232	-1.5146	-0.00089261	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.732	1	9315	9315		26.063	0	1	5946500			47411	11585	31914	31927	53454	53454					0.09147016757151505
RGARLIPSPPN	11	Unmodified	_RGARLIPSPPN_					0	0	0		ENST00000427845.5_1_3:184033190-184033298:+|nuORF	ENST00000427845.5_1_3:184033190-184033298:+|nuORF	ENST00000427845.5_1_3:184033190-184033298:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3429565429688	2	589.343646	1176.67274	-0.63668	-0.00037522	-0.11858	-6.9885E-05	-0.75526	-0.00044511	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.66929	1	11104	11104		36.447	0	1	2236100			47412	11585	31914	31927	53455	53455					0.09147016757151505
RGARLRVK	8	Unmodified	_RGARLRVK_					0	0	0		ENST00000602124.1_1_19:58427023-58427871:-|nuORF	ENST00000602124.1_1_19:58427023-58427871:-|nuORF	ENST00000602124.1_1_19:58427023-58427871:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.31463623046875	2	478.317235	954.619916	-1.8008	-0.00086135	-4.2619	-0.0020385	-6.0627	-0.0028999	478.3150553405579	36.705	0.5735	36.705	36.293	36.867	0					27	12	3	0	0	0	0.79929	1	2154	2154		18.324	4.5491	1	88940			47413	14399	31915	31928	53456	53456					0.14079103484982625
RGARRWRKLYR	11	Unmodified	_RGARRWRKLYR_					0	0	0		nc|ENSG00000067606|Q05513-3|PRKCZ;ENSG00000067606|ENST00000378567|PRKCZ;ENST00000486681.5_3_1:2036198-2076794:+|nuORF	nc|ENSG00000067606|Q05513-3|PRKCZ	nc|ENSG00000067606|Q05513-3|PRKCZ	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.9736022949219	3	506.639398	1516.89637	2.9503	0.0014948	4.255	0.0021557	7.2053	0.0036505	506.64156292179723	112.87	1.2851	112.84	112.65	113.93	-0.024811					46	35	2	0	0	0	0.17911	1	12487	12487		18.531	8.8849	1	604080			47414	1185	31916	31929	53457	53457					0.15859349981928972
RGARVEGVP	9	Unmodified	_RGARVEGVP_					0	0	0		ENST00000367177.3_1_1:204654612-204654840:-|nuORF	ENST00000367177.3_1_1:204654612-204654840:-|nuORF	ENST00000367177.3_1_1:204654612-204654840:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7694396972656	2	470.769783	939.525013	-0.061589	-2.8994E-05	-1.2536	-0.00059017	-1.3152	-0.00061916	470.7690565543328	55.059	1.681	55.051	54.414	56.095	-0.0077095					114	49	3	0	0	0	0.58668	1	4855	4855		47.657	1.6851	1	1601200			47415	10538	31917	31930	53458	53458					0.05283125223149909
RGARVEGVP	9	Unmodified	_RGARVEGVP_					0	0	0		ENST00000367177.3_1_1:204654612-204654840:-|nuORF	ENST00000367177.3_1_1:204654612-204654840:-|nuORF	ENST00000367177.3_1_1:204654612-204654840:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7679443359375	2	470.769783	939.525013	-1.0221	-0.00048115	-0.40497	-0.00019065	-1.427	-0.0006718	470.76946116999153	50.688	1.1627	50.718	50.343	51.506	0.029629					82	35	3	0	0	0	0.78536	1	3961	3961		29.15	2.4566	1	1717600			47416	10538	31917	31930	53459	53459					0.05283125223149909
RGATGHRCSF	10	Unmodified	_RGATGHRCSF_					0	0	0		ENST00000409951.1_1_2:120438557-120438698:+|nuORF	ENST00000409951.1_1_2:120438557-120438698:+|nuORF	ENST00000409951.1_1_2:120438557-120438698:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.2626342773438	2	546.261799	1090.50905	-1.4106	-0.00077056	3.9208	0.0021418	2.5102	0.0013712	546.2637570613591	62.711	1.0832	63.098	62.621	63.704	0.38779					61	24	3	0	0	0	0.70553	1	6716	6716		44.377	7.2181	1	791480			47417	11321	31918	31931	53460	53460					-0.03258904285416975
RGATSLRL	8	Unmodified	_RGATSLRL_					0	0	0			REV__ENST00000501338.5_1_5:96270334-96270637:-|nuORF	REV__ENST00000501338.5_1_5:96270334-96270637:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26544189453125	2	437.266876	872.519199	-1.6274	-0.00071159	-1.0909	-0.00047703	-2.7183	-0.0011886	437.2663457196616	22.467	1.2654	22.516	22.142	23.407	0.048553					168	64	5	0	0	0	0.90465	1	672	672		40.573	0	1	1779900	+		47418	27811	31919	31932	53461	53461					0.0778402671146523
RGAVTPTPA	9	Unmodified	_RGAVTPTPA_					0	0	0		ENST00000318430.9_1_17:76134666-76137438:+|nuORF	ENST00000318430.9_1_17:76134666-76137438:+|nuORF	ENST00000318430.9_1_17:76134666-76137438:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2454833984375	2	435.245609	868.476666	-0.74855	-0.0003258	0.65444	0.00028484	-0.094112	-4.0962E-05	435.2457494614933	47.227	1.0811	48.151	47.783	48.864	0.92315					74	26	4	0	0	0	0.55097	1	4521	4521		49.442	3.4896	1	7740400			47419	10008	31920	31933	53462	53462					0.037166315832337204
RGAWLLKL	8	Unmodified	_RGAWLLKL_					0	0	0			REV__ENST00000577142.1_1_17:79649546-79649603:-|nuORF	REV__ENST00000577142.1_1_17:79649546-79649603:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.80499267578125	2	478.805637	955.596721	-0.92233	-0.00044162	0.65678	0.00031447	-0.26555	-0.00012715	478.8057713642185	40.528	0.94245	40.532	40.111	41.054	0.0043983					47	34	2	0	0	0	0.86791	1	2580	2580		28.254	1.4582	1	213120	+		47420	29001	31921	31934	53463	53463					0.11714664647661266
RGCMVDQGPG	10	Unmodified	_RGCMVDQGPG_					0	0	0		ENST00000589096.1_1_19:13869843-13870239:+|nuORF	ENST00000589096.1_1_19:13869843-13870239:+|nuORF	ENST00000589096.1_1_19:13869843-13870239:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2222595214844	2	510.223494	1018.43243	1.4058	0.00071727	-2.6134	-0.0013334	-1.2076	-0.00061613	510.22200691810997	92.893	1.7711	93.34	92.349	94.12	0.44661					97	41	3	0	0	0	0.80179	3	11022	11022;11043;11054		39.253	8.662	1	1371800			47421	14225	31922	31935	53464;53465;53466	53464					-0.07604463896905145
RGDLLGFQNV	10	Unmodified	_RGDLLGFQNV_					0	0	0		ENST00000481641.1_1_2:201725957-201728949:-|nuORF;nc|ENSG00000013441|P49759-3|CLK1	ENST00000481641.1_1_2:201725957-201728949:-|nuORF	ENST00000481641.1_1_2:201725957-201728949:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	559.8009643554688	2	559.80128	1117.58801	-0.76325	-0.00042727	-1.8005	-0.0010079	-2.5637	-0.0014352	559.7999204810457	40.551	0.39139	40.52	40.3	40.692	-0.030991					21	11	2	0	0	0	0.73395	1	2887	2887		42.864	3.8428	1	170550			47422	12463	31923	31936	53467	53467					0.03391646220529765
RGDPNLRRRTI	11	Unmodified	_RGDPNLRRRTI_					0	0	0			REV__nc|ENSG00000137094|O75953|DNAJB5	REV__nc|ENSG00000137094|O75953|DNAJB5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9323425292969	3	451.932248	1352.77491	-1.2127	-0.00054806	2.1165	0.00095653	0.90382	0.00040847	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.72892	1	10202	10202		26.75	6.7192	1	518100	+		47423	19359	31924	31937	53468	53468					0.11263682828735
RGDPSWCV	8	Unmodified	_RGDPSWCV_					0	0	0			REV__ENSG00000185800|ENST00000270223|DMWD	REV__ENSG00000185800|ENST00000270223|DMWD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	459.2557678222656	2	460.20817	918.401786	-0.29124	-0.00013403	4.4312	0.0020393	4.1399	0.0019052	460.2101646246407	77.14	1.0429	77.54	77.295	78.337	0.3997					57	25	4	0	0	0	0.4196	1	8873	8873		35.201	0	1	1553600	+		47424	22793	31925	31938	53469	53469					-0.060678742196500934
RGEALGLVG	9	Unmodified	_RGEALGLVG_					0	0	0		ENSG00000268606|ENST00000684311|MAGEA2;ENSG00000183305|ENST00000682532|MAGEA2B;ENSG00000221867|ENST00000370278|MAGEA3;ENSG00000197172|ENST00000329342|MAGEA6	ENSG00000268606|ENST00000684311|MAGEA2	ENSG00000268606|ENST00000684311|MAGEA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.2525329589844	2	436.253434	870.492316	-1.259	-0.00054923	-0.63671	-0.00027777	-1.8957	-0.00082699	436.25306316069333	43.734	1.1664	44.508	43.708	44.875	0.7738					51	28	3	0	0	0	0.38563	1	3982	3982		58.782	0.55203	1	1307000			47425	7519	31926	31939	53470	53470					0.051889181002820806
RGEASRIKLVA	11	Unmodified	_RGEASRIKLVA_					0	0	0			REV__ENSG00000168158|ENST00000304936|OR2C1	REV__ENSG00000168158|ENST00000304936|OR2C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.5762634277344	3	400.578811	1198.7146	2.7177	0.0010886	1.7342	0.00069467	4.4518	0.0017833	400.57942388573207	112.17	0.64908	112.15	112.05	112.69	-0.025414					36	14	3	0	0	0	0.74771	1	12390	12390		22.562	1.5294	1	3056300	+		47426	21468	31927	31940	53471	53471					0.12319572445653648
RGELVVRYRV	10	Unmodified	_RGELVVRYRV_					0	0	0		ENST00000599659.5_1_19:41725288-41749617:+|nuORF;nc|ENSG00000167601|P30530-2|AXL;ENSG00000167601|ENST00000301178|AXL	ENST00000599659.5_1_19:41725288-41749617:+|nuORF	ENST00000599659.5_1_19:41725288-41749617:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	623.8714599609375	2	623.872571	1245.73059	0.81494	0.00050842	-4.2483	-0.0026504	-3.4334	-0.002142	623.869854859963	104.57	2.157	104.61	104.13	106.28	0.039856					135	51	4	0	0	0	0.8486	1	11379	11379		18.262	0	1	1612700			47427	6304	31928	31941	53472	53472					0.11755278682539938
RGEPGSYVYV	10	Unmodified	_RGEPGSYVYV_					0	0	0			REV__nc|ENSG807|P61550|ERVS71-1	REV__nc|ENSG807|P61550|ERVS71-1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.779541015625	2	563.780013	1125.54547	-0.59695	-0.00033655	-1.8719	-0.0010553	-2.4688	-0.0013919	563.7782390832367	25.376	0.53678	25.427	25.113	25.649	0.050453					34	21	2	0	0	0	0.86763	1	1012	1012		26.693	0	1	65081	+		47428	30314	31929	31942	53473	53473					-0.012277489077177961
RGERGTMDIK	10	Unmodified	_RGERGTMDIK_					0	0	0			REV__ENSG00000070018|ENST00000261349|LRP6	REV__ENSG00000070018|ENST00000261349|LRP6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	581.80419921875	2	581.803497	1161.59244	-0.84342	-0.00049071	1.504	0.000875	0.66053	0.0003843	581.8042209078138	64.934	0.90569	64.934	64.471	65.377	0					126	41	4	0	0	0	0.33399	1	5752	5752		69.628	11.398	1	1021200	+		47429	16592	31930	31943	53474	53474					0.018107873717553957
RGESIQLILEQ	11	Unmodified	_RGESIQLILEQ_					0	0	0			REV__ENST00000555109.1_1_14:24970801-24977459:+|nuORF	REV__ENST00000555109.1_1_14:24970801-24977459:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.371826171875	2	643.359159	1284.70376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.98	1	116.95	116.45	117.45	-0.02433								0	0	0	0.56276	1	12958	12958		20.837	1.7336	1		+		47430	28677	31931	31944	53475	53475					0.07280125280726679
RGESIQLILEQ	11	Unmodified	_RGESIQLILEQ_					0	0	0			REV__ENST00000555109.1_1_14:24970801-24977459:+|nuORF	REV__ENST00000555109.1_1_14:24970801-24977459:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.3668212890625	2	643.359159	1284.70376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.37	1	116.35	115.85	116.85	-0.014999								0	0	0	0.56276	1	13965	13965		27.047	3.5246	1		+		47431	28677	31931	31944	53476	53476					0.07280125280726679
RGFGIKVMLV	10	Unmodified	_RGFGIKVMLV_					0	0	0		ENST00000461338.5_1_2:162017862-162019698:+|nuORF	ENST00000461338.5_1_2:162017862-162019698:+|nuORF	ENST00000461338.5_1_2:162017862-162019698:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3377685546875	2	560.338987	1118.66342	1.3844	0.00077572	1.2296	0.00068898	2.6139	0.0014647	560.3396080868185	114.62	2.2118	114.64	113.84	116.05	0.026466					86	62	2	0	0	0	0.86444	1	12652	12652		14.865	0	1	96310			47432	12021	31932	31945	53477	53477					0.10883532147249753
RGFIRLGG	8	Unmodified	_RGFIRLGG_					0	0	0		nc|ENSG00000179397|Q5SY80-3|CATSPERE;nc|ENSG00000179397|Q5SY80-2|CATSPERE;ENSG00000179397|ENST00000366534|CATSPERE	nc|ENSG00000179397|Q5SY80-3|CATSPERE	nc|ENSG00000179397|Q5SY80-3|CATSPERE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2629699707031	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.86288	1	3401	3401		26.796	0	1	4268300			47433	7268	31933	31946	53478	53478					0.07144347919643224
RGFIRLGG	8	Unmodified	_RGFIRLGG_					0	0	0		nc|ENSG00000179397|Q5SY80-3|CATSPERE;nc|ENSG00000179397|Q5SY80-2|CATSPERE;ENSG00000179397|ENST00000366534|CATSPERE	nc|ENSG00000179397|Q5SY80-3|CATSPERE	nc|ENSG00000179397|Q5SY80-3|CATSPERE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2626953125	2	438.264136	874.51372	0.15263	6.689E-05	-1.9074	-0.00083592	-1.7547	-0.00076903	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.87922	1	2141	2141		31.955	0	1	11370000			47434	7268	31933	31946	53479	53479					0.07144347919643224
RGFLGGLR	8	Unmodified	_RGFLGGLR_					0	0	0		ENST00000551835.5_1_12:57998631-57999993:+|nuORF;ENST00000550596.5_1_12:57998631-57999917:+|nuORF	ENST00000551835.5_1_12:57998631-57999993:+|nuORF	ENST00000551835.5_1_12:57998631-57999993:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2632141113281	2	438.264136	874.51372	-1.2142	-0.00053214	-0.86056	-0.00037715	-2.0748	-0.00090929	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.86288	1	3431	3431		26.796	2.5934	1	4828000			47435	13659	31934	31947	53480	53480					0.07144347919654592
RGFLGGLR	8	Unmodified	_RGFLGGLR_					0	0	0		ENST00000551835.5_1_12:57998631-57999993:+|nuORF;ENST00000550596.5_1_12:57998631-57999917:+|nuORF	ENST00000551835.5_1_12:57998631-57999993:+|nuORF	ENST00000551835.5_1_12:57998631-57999993:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2636413574219	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.85277	1	2920	2920		25.45	3.4903	1	22029000			47436	13659	31934	31947	53481	53481					0.07144347919654592
RGFLGGLR	8	Unmodified	_RGFLGGLR_					0	0	0		ENST00000551835.5_1_12:57998631-57999993:+|nuORF;ENST00000550596.5_1_12:57998631-57999917:+|nuORF	ENST00000551835.5_1_12:57998631-57999993:+|nuORF	ENST00000551835.5_1_12:57998631-57999993:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.262939453125	2	438.264136	874.51372	0.60068	0.00026326	-1.8619	-0.00081599	-1.2612	-0.00055273	438.263210874223	57.843	1.7031	58.396	57.682	59.385	0.55323					87	41	3	0	0	0	0.8347	1	6042	6042		23.042	1.3402	1	1743700			47437	13659	31934	31947	53482	53482					0.07144347919654592
RGFLGLGP	8	Unmodified	_RGFLGLGP_					0	0	0		ENST00000524570.5_1_8:144904827-144905247:-|nuORF	ENST00000524570.5_1_8:144904827-144905247:-|nuORF	ENST00000524570.5_1_8:144904827-144905247:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.73944091796875	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.88915	1	1879	1879		35.201	6.9464	1	1448600			47438	13219	31935	31948	53483	53483					0.0502585427974509
RGFLGLGP	8	Unmodified	_RGFLGLGP_					0	0	0		ENST00000524570.5_1_8:144904827-144905247:-|nuORF	ENST00000524570.5_1_8:144904827-144905247:-|nuORF	ENST00000524570.5_1_8:144904827-144905247:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.7398681640625	2	408.739963	815.465373	1.5082	0.00061648	-2.0092	-0.00082126	-0.50101	-0.00020478	408.739095634202	34.891	2.006	35.101	34.812	36.818	0.21003					151	50	4	0	0	0	0.9159	1	2623	2623		44.531	7.5026	1	5089300			47439	13219	31935	31948	53484	53484					0.0502585427974509
RGFLNLAR	8	Unmodified	_RGFLNLAR_					0	0	0		nc|ENSG00000139278|P48060-2|GLIPR1	nc|ENSG00000139278|P48060-2|GLIPR1	nc|ENSG00000139278|P48060-2|GLIPR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.283447265625	2	473.782693	945.550834	0.79572	0.000377	-0.64784	-0.00030693	0.14789	7.0066E-05	473.7822138533881	18.495	0.60831	18.018	17.843	18.451	-0.47694					20	12	3	0	0	0	0.4196	1	410	410		1.2052	0	1	103670			47440	14957	31936	31949	53485	53485					0.07588019465413254
RGFRLVGKSSA	11	Unmodified	_RGFRLVGKSSA_					0	0	0		nc|ENSG00000164796|Q7Z407-5|CSMD3;nc|ENSG00000164796|Q7Z407-3|CSMD3;nc|ENSG00000164796|Q7Z407-4|CSMD3;nc|ENSG00000164796|Q7Z407-2|CSMD3;ENSG00000164796|ENST00000297405|CSMD3	nc|ENSG00000164796|Q7Z407-5|CSMD3	nc|ENSG00000164796|Q7Z407-5|CSMD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3411254882812	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.72106	1	10157	10157		28.081	6.3957	1	17904000			47441	6004	31937	31950	53486	53486					0.09147016757151505
RGFTHLVL	8	Unmodified	_RGFTHLVL_					0	0	0			REV__ENST00000342756.9_1_4:57357643-57361536:+|nuORF	REV__ENST00000342756.9_1_4:57357643-57361536:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.7784118652344	2	471.779619	941.544686	-0.10976	-5.1782E-05	-1.3602	-0.00064171	-1.47	-0.0006935	471.7788250865109	82.739	0.81616	82.805	82.396	83.212	0.065918					39	18	3	0	0	0	0.87922	1	8216	8216		31.955	1.4512	1	340970	+		47442	25278	31938	31951	53487	53487					0.07157501233893981
RGFVKTVAL	9	Unmodified	_RGFVKTVAL_					0	0	0			REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.8051452636719	2	495.808377	989.6022	-0.072972	-3.618E-05	-4.0378	-0.002002	-4.1108	-0.0020382	495.80633218090117	91.181	1.8649	91.25	90.804	92.669	0.069328					89	44	3	0	0	0	0.78058	1	9379	9379		30.504	6.3009	1	621650	+		47443	16754	31939	31952	53488	53488					0.10698343439469227
RGFVKTVAL	9	Unmodified	_RGFVKTVAL_					0	0	0			REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.8060302734375	2	495.808377	989.6022	-0.57039	-0.0002828	-3.7409	-0.0018548	-4.3113	-0.0021376	495.8065300685273	90.913	2.2012	90.959	90.595	92.796	0.046448					94	52	3	0	0	0	0.78058	1	9476	9476		30.504	2.6214	1	659920	+		47444	16754	31939	31952	53489	53489					0.10698343439469227
RGGADKRV	8	Unmodified	_RGGADKRV_					0	0	0			REV__CON__Q2KJF1	REV__CON__Q2KJF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.7491149902344	2	429.74885	857.483148	-0.15763	-6.7743E-05	2.1698	0.00093248	2.0122	0.00086473	429.7496181624476	40.277	2.7409	40.229	39.975	42.716	-0.04789					188	88	4	0	0	0	0.91472	1	2577	2577		44.117	1.7207	1	4300300	+	+	47445	16005	31940	31953	53490	53490					0.04870569534602964
RGGCAAPAP	9	Unmodified	_RGGCAAPAP_					0	0	0		ENST00000545671.5_1_12:132312976-132323174:+|nuORF;ENSG00000198598|ENST00000360564|MMP17	ENST00000545671.5_1_12:132312976-132323174:+|nuORF	ENST00000545671.5_1_12:132312976-132323174:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.19818115234375	2	400.197605	798.380657	-1.8242	-0.00073005	-3.8427	-0.0015379	-5.667	-0.0022679	400.196324479631	82.498	1.2255	82.653	82.3	83.526	0.15474					77	28	4	0	0	0	0.67235	1	8024	8024		42.474	12.633	1	6786400			47446	8293	31941	31954	53491	53491					-0.026598395285191145
RGGCAAPAP	9	Unmodified	_RGGCAAPAP_					0	0	0		ENST00000545671.5_1_12:132312976-132323174:+|nuORF;ENSG00000198598|ENST00000360564|MMP17	ENST00000545671.5_1_12:132312976-132323174:+|nuORF	ENST00000545671.5_1_12:132312976-132323174:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.19622802734375	2	400.197605	798.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.219	1	83.366	82.866	83.866	0.14694								0	0	0	0.31472	1	8053	8053		25.45	8.0852	1				47447	8293	31941	31954	53492	53492					-0.026598395285191145
RGGCAAPAP	9	Unmodified	_RGGCAAPAP_					0	0	0		ENST00000545671.5_1_12:132312976-132323174:+|nuORF;ENSG00000198598|ENST00000360564|MMP17	ENST00000545671.5_1_12:132312976-132323174:+|nuORF	ENST00000545671.5_1_12:132312976-132323174:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.19757080078125	2	400.197605	798.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.206	1	82.679	82.179	83.179	0.47383								0	0	0	0.29299	1	9535	9535		33.516	1.5607	1				47448	8293	31941	31954	53493	53493					-0.026598395285191145
RGGDLRVP	8	Unmodified	_RGGDLRVP_					0	0	0		ENST00000399813.1_1_22:18043396-18070735:+|nuORF	ENST00000399813.1_1_22:18043396-18070735:+|nuORF	ENST00000399813.1_1_22:18043396-18070735:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25164794921875	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.87479	1	7303	7303		30.504	5.0535	1	712390			47449	11212	31942	31955	53494	53494					0.048394536773685104
RGGDLRVP	8	Unmodified	_RGGDLRVP_					0	0	0		ENST00000399813.1_1_22:18043396-18070735:+|nuORF	ENST00000399813.1_1_22:18043396-18070735:+|nuORF	ENST00000399813.1_1_22:18043396-18070735:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2514953613281	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.89494	1	9219	9219		37.159	1.9584	1	2020200			47450	11212	31942	31955	53495	53495					0.048394536773685104
RGGGCSLGPM	10	Unmodified	_RGGGCSLGPM_					0	0	0			REV__ENST00000260970.7_1_2:170440858-170460586:+|nuORF	REV__ENST00000260970.7_1_2:170440858-170460586:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.71563720703125	2	467.715304	933.416056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.086	1	89.537	89.037	90.037	0.45058								0	0	0	0.45132	1	10510	10510		31.53	3.6476	1		+		47451	24374	31943	31956	53496	53496					-0.05331545063006615
RGGLAQHT	8	Unmodified	_RGGLAQHT_					0	0	0			REV__ENST00000440716.5_1_19:54871478-54875971:-|nuORF	REV__ENST00000440716.5_1_19:54871478-54875971:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.228271484375	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.87064	1	8147	8147		29.15	2.3535	1	888480	+		47452	26743	31944	31957	53497	53497					0.015265941262214255
RGGLPRVD	8	Unmodified	_RGGLPRVD_					0	0	0			REV__ENST00000487115.1_1_7:99707771-99708935:-|nuORF	REV__ENST00000487115.1_1_7:99707771-99708935:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2523193359375	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87064	1	7158	7158		29.15	3.6994	1	1788100	+		47453	27570	31945	31958	53498	53498					0.048394536773685104
RGGPLSRGI	9	Unmodified	_RGGPLSRGI_					0	0	0		ENST00000270460.10_2_19:56206922-56207027:+|nuORF	ENST00000270460.10_2_19:56206922-56207027:+|nuORF	ENST00000270460.10_2_19:56206922-56207027:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7723083496094	2	456.772326	911.530098	-1.7558	-0.00080201	2.154	0.00098388	0.39816	0.00018187	456.7729586253597	89.816	2.3334	89.992	88.581	90.914	0.1758					104	54	4	0	0	0	0.76255	1	8928	8928		35.618	6.4687	1	808890			47454	9554	31946	31959	53499	53499					0.07079429085752054
RGGRLAGL	8	Unmodified	_RGGRLAGL_					0	0	0			REV__ENST00000505306.5_1_17:48154319-48165696:+|nuORF	REV__ENST00000505306.5_1_17:48154319-48165696:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.2481994628906	2	400.248486	798.48242	0.55585	0.00022248	0.35523	0.00014218	0.91109	0.00036466	400.2484529763441	24.6	0.84744	24.655	24.318	25.165	0.055025					44	24	3	0	0	0	0.89457	1	918	918		37.028	0	1	85580	+		47455	27877	31947	31960	53500	53500					0.07511774885574596
RGGRLLGA	8	Unmodified	_RGGRLLGA_					0	0	0			REV__ENST00000588984.5_1_19:3751262-3752524:-|nuORF	REV__ENST00000588984.5_1_19:3751262-3752524:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.2489929199219	2	400.248486	798.48242	2.8149	0.0011266	-2.0128	-0.0008056	0.80212	0.00032105	400.24758038028125	25.002	0.86704	24.965	24.581	25.448	-0.037176					34	22	2	0	0	0	0.81548	1	971	971		20.482	0	1	108830	+		47456	29119	31948	31961	53501	53501					0.07511774885574596
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	400.197509765625	2	400.193908	798.373263	-1.2044	-0.00048198	2.5965	0.0010391	1.3921	0.00055711	400.1947798209339	86.451	0.82581	86.451	86.169	86.995	0					36	18	3	0	0	0	0.4196	1	8225	8225		37.159	7.3176	1	321890	+		47457	27812	31949	31962	53502	53502					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.1963806152344	2	400.193908	798.373263	-0.18739	-7.4993E-05	4.283	0.001714	4.0956	0.001639	400.19593739643125	82.746	1.2452	82.812	82.44	83.685	0.06591					67	28	5	0	0	0	0.87064	2	8195	8195;8220		37.159	1.9584	1	4451600	+		47458	27812	31949	31962	53503;53504	53503					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.19696044921875	2	400.193908	798.373263	-0.18716	-7.4901E-05	2.8757	0.0011508	2.6886	0.0010759	400.1952819307741	86.353	1.3706	86.421	85.987	87.357	0.067444					79	31	5	0	0	0	0.87479	3	8736	8685;8723;8736		45.952	6.9305	1	2357200	+		47459	27812	31949	31962	53505;53506;53507	53507					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.19580078125	2	400.193908	798.373263	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.365	1	83.432	82.932	83.932	0.066719								0	0	0	0.29497	1	8281	8281		34.173	3.6689	1		+		47460	27812	31949	31962	53508	53508					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.196533203125	2	400.193908	798.373263	0.51059	0.00020433	3.3623	0.0013456	3.8729	0.0015499	400.1955363705816	82.964	1.6149	82.898	82.456	84.071	-0.066185					89	37	4	0	0	0	0.91977	2	8400	8400;8432		49.442	8.8689	1	4296700	+		47461	27812	31949	31962	53509;53510	53509					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.19635009765625	2	400.193908	798.373263	0.91791	0.00036734	2.5215	0.0010091	3.4394	0.0013764	400.1951514766141	86.536	1.7122	86.462	86.013	87.725	-0.073769					84	39	4	0	0	0	0.89494	2	8910	8910;8946		45.952	5.3793	1	3325200	+		47462	27812	31949	31962	53511;53512	53511					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.19610595703125	2	400.193908	798.373263	2.7375	0.0010955	0.48716	0.00019496	3.2247	0.0012905	400.19430392281004	82.738	1.2461	82.797	82.427	83.673	0.059166					65	28	4	0	0	0	0.91977	3	8286	8286;8298;8310		55.504	13.03	1	4511800	+		47463	27812	31949	31962	53513;53514;53515	53513					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.19683837890625	2	400.193908	798.373263	2.9562	0.001183	1.6178	0.00064742	4.5739	0.0018305	400.19504393030127	86.25	1.3268	86.305	85.975	87.302	0.055641					56	30	3	0	0	0	0.88601	2	8828	8757;8828		37.159	0.67956	1	2395800	+		47464	27812	31949	31962	53516;53517	53517					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.19647216796875	2	400.193908	798.373263	0.56967	0.00022798	2.9209	0.0011689	3.4905	0.0013969	400.1953507719879	82.54	1.3237	82.686	82.288	83.611	0.1455					67	30	3	0	0	0	0.90465	4	8016	7954;7978;8004;8016		47.916	6.9305	1	6052300	+		47465	27812	31949	31962	53518;53519;53520;53521	53521					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.1967468261719	2	400.193908	798.373263	0.60168	0.00024079	3.2716	0.0013093	3.8733	0.0015501	400.19549041096013	86.068	1.3495	86.217	85.858	87.207	0.14902					77	31	4	0	0	0	0.91977	1	8432	8432		45.952	6.9305	1	5538900	+		47466	27812	31949	31962	53522	53522					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.19683837890625	2	400.193908	798.373263	1.0095	0.00040398	2.1539	0.00086197	3.1633	0.0012659	400.19508038720977	81.709	1.4923	82.135	81.837	83.33	0.42646					93	36	4	0	0	0	0.89494	3	9509	9476;9490;9509		45.952	8.9235	1	32993000	+		47467	27812	31949	31962	53523;53524;53525	53525					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1954345703125	2	400.193908	798.373263	1.1195	0.00044802	1.6036	0.00064177	2.7232	0.0010898	400.194879000031	85.082	1.7417	85.522	85.026	86.768	0.43967					94	42	4	0	0	0	0.89494	7	9925	9880;9889;9925;9937;9949;9961;9998		45.952	8.9235	1	30482000	+		47468	27812	31949	31962	53526;53527;53528;53529;53530;53531;53532	53528					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.1960754394531	2	400.193908	798.373263	-0.12707	-5.0854E-05	2.9909	0.0011969	2.8638	0.0011461	400.19544340069075	81.631	1.4124	82.131	81.786	83.198	0.49966					81	34	4	0	0	0	0.89962	6	9484	9436;9448;9472;9484;9509;9521		55.504	16.698	1	35228000	+		47469	27812	31949	31962	53533;53534;53535;53536;53537;53538	53536					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.1955871582031	2	400.193908	798.373263	-0.4695	-0.00018789	3.6706	0.001469	3.2011	0.0012811	400.1956755271944	85.113	2.0219	85.561	85.155	87.177	0.44736					102	49	4	0	0	0	0.79403	6	9982	9934;9946;9958;9970;9982;10006		63.306	22.734	1	34648000	+		47470	27812	31949	31962	53539;53540;53541;53542;53543;53544	53543					-0.03398855804573486
RGGSASQH	8	Unmodified	_RGGSASQH_					0	0	0			REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	REV__ENST00000501338.5_1_5:96271077-96271491:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.1973571777344	2	400.193908	798.373263	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.969	1	86.417	85.917	86.917	0.44736								0	0	0	0.29703	1	10088	10088		37.159	1.9584	1		+		47471	27812	31949	31962	53545	53545					-0.03398855804573486
RGGSSDSSPK	10	Unmodified	_RGGSSDSSPK_					0	0	0			REV__ENST00000510927.5_1_4:106967729-107168455:-|nuORF	REV__ENST00000510927.5_1_4:106967729-107168455:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.2366943359375	2	489.23597	976.457387	-0.77305	-0.00037821	1.5327	0.00074983	0.7596	0.00037162	489.23682963313604	63.081	1.9408	63.104	62.828	64.768	0.022984					241	80	5	0	0	0	0.86587	1	5600	5600		29.17	1.2878	1	3852300	+		47472	19939	31950	31963	53546	53546					-0.031783694983232635
RGGVKGPH	8	Unmodified	_RGGVKGPH_					0	0	0			REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.23150634765625	2	404.232836	806.45112	-0.39209	-0.00015849	0.40601	0.00016412	0.013927	5.6299E-06	404.23288491550113	84.848	3.8677	85.296	83.349	87.217	0.44736					164	94	4	0	0	0	0.82464	1	9959	9959		21.702	0	1	3295900	+		47473	28899	31951	31964	53547	53547					0.040152018514731935
RGGYRSLL	8	Unmodified	_RGGYRSLL_					0	0	0			REV__ENST00000453426.1_1_6:32811873-32813517:+|nuORF	REV__ENST00000453426.1_1_6:32811873-32813517:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.2654113769531	2	461.266876	920.519199	0.74903	0.0003455	-3.8122	-0.0017584	-3.0632	-0.0014129	461.2650179304886	92.74	1.2179	93.186	92.819	94.037	0.44661					57	28	3	0	0	0	0.8347	1	11061	11061		23.042	0.0057756	1	317280	+		47474	26912	31952	31965	53548	53548					0.0557602671146924
RGGYSGRG	8	Unmodified	_RGGYSGRG_					0	0	0			REV__CON__Q3TTY5	REV__CON__Q3TTY5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.20404052734375	2	405.204276	808.393999	0.52684	0.00021348	0.86096	0.00034886	1.3878	0.00056234	405.20454904166456	77.549	2.3576	77.686	77.044	79.402	0.13667					120	85	3	0	0	0	0.87479	1	7346	7346		30.504	1.3541	1	116860	+	+	47475	16017	31953	31966	53549	53549					-0.01786265424902922
RGHAGGSASH	10	Unmodified	_RGHAGGSASH_					0	0	0			REV__ENST00000556867.1_1_14:90422403-90422577:+|nuORF	REV__ENST00000556867.1_1_14:90422403-90422577:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.72198486328125	2	468.723364	935.432175	-1.0176	-0.000477	0.92356	0.0004329	-0.094085	-4.41E-05	468.7236481671381	70.265	0.71931	70.303	70.071	70.79	0.038055					54	36	2	0	0	0	0.82886	1	6728	6728		37.812	2.1932	1	311830	+		47476	28709	31954	31967	53550	53550					-0.03812379510247865
RGHKRARKR	9	Unmodified	_RGHKRARKR_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.8585815429688	2	582.868489	1163.72242	0.1137	6.627E-05	1.1105	0.00064726	1.2242	0.00071353	582.8690267756018	99.701	2.7623	99.749	98.055	100.82	0.047523					114	63	2	0	0	0	0.20789	1	10535	10535		29.15	10.046	1	175800			47477	6275	31955	31968	53551	53551					0.14711189276454206
RGHKRARKR	9	Unmodified	_RGHKRARKR_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	583.858154296875	2	582.868489	1163.72242	0.72412	0.00042207	1.0351	0.00060332	1.7592	0.0010254	582.8686228402482	98.57	0.6236	98.798	98.303	98.927	0.22788					15	13	2	0	0	0	0.20789	1	10194	10194		29.15	4.6304	1	25436			47478	6275	31955	31968	53552	53552					0.14711189276454206
RGHKRARKR	9	Unmodified	_RGHKRARKR_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	582.868489	1163.72242	0.72576	0.00042302	0.74951	0.00043686	1.4753	0.00085989	582.8686244567397	99.856	1.1013	100.07	99.359	100.46	0.21512	0.13097	5.7619E-05	NaN	29.15	32	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69166			47479	6275	31955	31968							0.14711189276454206
RGHKRARKR	9	Unmodified	_RGHKRARKR_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	582.868489	1163.72242	0.8743	0.0005096	0.70965	0.00041364	1.5839	0.00092323	583.3705778405348	99.701	1.4642	99.852	99.229	100.69	0.15073	-0.088512	1.1164E-05	NaN	29.15	50	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78351			47480	6275	31955	31968							0.14711189276454206
RGHKRARKR	9	Unmodified	_RGHKRARKR_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	582.868489	1163.72242	0.60636	0.00035343	1.0404	0.0006064	1.6467	0.00095983	582.86883504182	99.579	0.87592	99.912	99.379	100.25	0.33295	-0.028689	0.0003967	NaN	29.15	27	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94225			47481	6275	31955	31968							0.14711189276454206
RGHKRARKR	9	Unmodified	_RGHKRARKR_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	582.868489	1163.72242	1.3957	0.00081348	-0.28443	-0.00016579	1.1112	0.0006477	582.868443847049	99.622	0.9548	99.985	99.29	100.24	0.36292	0.044022	-0.0011477	NaN	29.15	28	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119770			47482	6275	31955	31968							0.14711189276454206
RGHKTLAS	8	Unmodified	_RGHKTLAS_					0	0	0			REV__ENSG00000179965|ENST00000319296|ZNF771	REV__ENSG00000179965|ENST00000319296|ZNF771	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2513122558594	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.87922	1	8049	8049		31.955	3.7006	1	3292300	+		47483	22372	31956	31969	53553	53553					0.04839453677379879
RGHTKASRIIA	11	Unmodified	_RGHTKASRIIA_					0	0	0		ENST00000500986.5_1_12:93960742-93965530:-|nuORF	ENST00000500986.5_1_12:93960742-93965530:-|nuORF	ENST00000500986.5_1_12:93960742-93965530:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.91058349609375	3	403.910672	1208.71019	1.4026	0.00056654	-2.3482	-0.00094848	-0.9456	-0.00038194	403.9097044639606	65.998	1.3411	66.384	65.959	67.3	0.38582					64	35	2	0	0	0	0.72892	1	7180	7180		26.75	2.5179	1	273570			47484	12842	31957	31970	53554	53554					0.11418108022758133
RGIGQATH	8	Unmodified	_RGIGQATH_					0	0	0		ENST00000503417.1_1_5:137515369-137517456:+|nuORF;nc|ENSG00000112984|O95235-2|KIF20A;ENSG00000112984|ENST00000394894|KIF20A	ENST00000503417.1_1_5:137515369-137517456:+|nuORF	ENST00000503417.1_1_5:137515369-137517456:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2276916503906	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.89043	1	7896	7896		35.618	2.8059	1	888480			47485	2691	31958	31971	53555	53555					0.015265941262214255
RGIIDLTNM	9	Unmodified	_RGIIDLTNM_					0	0	0		nc|ENSG00000141027|O75376-2|NCOR1;ENSG00000141027|ENST00000268712|NCOR1;ENST00000470782.5_1_17:15935612-15971511:-|nuORF	nc|ENSG00000141027|O75376-2|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7777709960938	2	516.778959	1031.54336	-1.0031	-0.00051839	-2.6105	-0.001349	-3.6136	-0.0018674	516.777785348129	47.235	0.75013	48.158	47.871	48.622	0.92315					61	18	4	0	0	0	0.41566	1	4503	4503		56.721	1.9447	1	3052700			47486	4476	31959	31972	53556	53556					0.02885499082822207
RGIIFTRTR	9	Unmodified	_RGIIFTRTR_					0	0	0		ENSG00000108771|ENST00000251642|DHX58;ENST00000586522.5_1_17:40255624-40263910:-|nuORF	ENSG00000108771|ENST00000251642|DHX58	ENSG00000108771|ENST00000251642|DHX58	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.341064453125	2	560.340907	1118.66726	3.1454	0.0017625	-4.1604	-0.0023312	-1.015	-0.00056875	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.7932	1	13062	13062		26.693	6.2111	1	151040			47487	2428	31960	31973	53557	53557					0.11267337965296065
RGIIFTRTR	9	Unmodified	_RGIIFTRTR_					0	0	0		ENSG00000108771|ENST00000251642|DHX58;ENST00000586522.5_1_17:40255624-40263910:-|nuORF	ENSG00000108771|ENST00000251642|DHX58	ENSG00000108771|ENST00000251642|DHX58	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.340576171875	2	560.340907	1118.66726	-1.4185	-0.00079484	0.46581	0.00026101	-0.95269	-0.00053383	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	1	12892	12892		19.997	2.6318	1	4071000			47488	2428	31960	31973	53558	53558					0.11267337965296065
RGIITRDGT	9	Unmodified	_RGIITRDGT_					0	0	0			REV__ENSG00000105675|ENST00000262623|ATP4A	REV__ENSG00000105675|ENST00000262623|ATP4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7802429199219	2	494.780348	987.546142	1.0619	0.0005254	-1.0199	-0.00050462	0.042	2.0781E-05	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.69624	1	8808	8808		40.778	0.20554	1	657500	+		47489	17561	31961	31974	53559	53559					0.051870905319901794
RGIKHTGG	8	Unmodified	_RGIKHTGG_					0	0	0			REV__ENSG00000166035|ENST00000299022|LIPC	REV__ENSG00000166035|ENST00000299022|LIPC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2380676269531	2	413.238119	824.461684	-1.33	-0.0005496	2.1463	0.00088694	0.81635	0.00033735	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.84341	4	7182	7024;7149;7173;7182		47.916	10.756	1	895630	+		47490	21246	31962	31975	53560;53561;53562;53563	53563					0.04243184505912723
RGIKHTGG	8	Unmodified	_RGIKHTGG_					0	0	0			REV__ENSG00000166035|ENST00000299022|LIPC	REV__ENSG00000166035|ENST00000299022|LIPC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2378234863281	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.86677	11	7542	7172;7515;7535;7542;7566;7574;7584;7600;7610;7629;7652		44.117	13.613	1	1747900	+		47491	21246	31962	31975	53564;53565;53566;53567;53568;53569;53570;53571;53572;53573;53574	53567					0.04243184505912723
RGIKHTGG	8	Unmodified	_RGIKHTGG_					0	0	0			REV__ENSG00000166035|ENST00000299022|LIPC	REV__ENSG00000166035|ENST00000299022|LIPC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2371826171875	2	413.238119	824.461684	-0.12335	-5.0972E-05	0.56146	0.00023202	0.43812	0.00018105	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.84341	19	7438	7438;7566;7572;7589;7600;7682;7691;7717;7725;7734;7740;7746;7752;7767;7775;7792;7809;7821;7832		35.618	8.8222	1	1978800	+		47492	21246	31962	31975	53575;53576;53577;53578;53579;53580;53581;53582;53583;53584;53585;53586;53587;53588;53589;53590;53591;53592;53593	53575					0.04243184505912723
RGIKHTGG	8	Unmodified	_RGIKHTGG_					0	0	0			REV__ENSG00000166035|ENST00000299022|LIPC	REV__ENSG00000166035|ENST00000299022|LIPC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.238037109375	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.86677	20	7559	7398;7440;7449;7473;7480;7488;7559;7573;7599;7609;7618;7631;7643;7652;7668;7679;7688;7709;7720;7732		53.351	22.848	1	2127000	+		47493	21246	31962	31975	53594;53595;53596;53597;53598;53599;53600;53601;53602;53603;53604;53605;53606;53607;53608;53609;53610;53611;53612;53613	53600					0.04243184505912723
RGIKHTGG	8	Unmodified	_RGIKHTGG_					0	0	0			REV__ENSG00000166035|ENST00000299022|LIPC	REV__ENSG00000166035|ENST00000299022|LIPC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2381286621094	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.86677	19	7344	6950;7016;7141;7244;7251;7259;7268;7282;7290;7300;7326;7335;7344;7354;7363;7371;7379;7388;7413		53.351	22.848	1	2012200	+		47494	21246	31962	31975	53614;53615;53616;53617;53618;53619;53620;53621;53622;53623;53624;53625;53626;53627;53628;53629;53630;53631;53632	53626					0.04243184505912723
RGIKHTGG	8	Unmodified	_RGIKHTGG_					0	0	0			REV__ENSG00000166035|ENST00000299022|LIPC	REV__ENSG00000166035|ENST00000299022|LIPC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2381591796875	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.8621	14	7408	7150;7174;7243;7251;7267;7276;7284;7294;7312;7344;7363;7379;7398;7408		44.117	8.9161	1	1692300	+		47495	21246	31962	31975	53633;53634;53635;53636;53637;53638;53639;53640;53641;53642;53643;53644;53645;53646	53646					0.04243184505912723
RGIKHTGG	8	Unmodified	_RGIKHTGG_					0	0	0			REV__ENSG00000166035|ENST00000299022|LIPC	REV__ENSG00000166035|ENST00000299022|LIPC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2379150390625	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.86677	4	7245	7245;7255;7299;7317		37.159	1.5408	1	1341700	+		47496	21246	31962	31975	53647;53648;53649;53650	53647					0.04243184505912723
RGIKHTGG	8	Unmodified	_RGIKHTGG_					0	0	0			REV__ENSG00000166035|ENST00000299022|LIPC	REV__ENSG00000166035|ENST00000299022|LIPC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2380065917969	2	413.238119	824.461684	0.89927	0.00037161	-0.73723	-0.00030465	0.16205	6.6964E-05	413.23775271826133	77.246	5.6199	77.651	75.794	81.414	0.40531					207	140	2	0	0	0	0.88601	2	8825	8800;8825		35.618	10.168	1	1083000	+		47497	21246	31962	31975	53651;53652	53652					0.04243184505912723
RGIKHTGG	8	Unmodified	_RGIKHTGG_					0	0	0			REV__ENSG00000166035|ENST00000299022|LIPC	REV__ENSG00000166035|ENST00000299022|LIPC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.23797607421875	2	413.238119	824.461684	-0.091267	-3.7715E-05	0.27761	0.00011472	0.18635	7.7005E-05	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.87479	1	8855	8855		30.504	1.3541	1	1247200	+		47498	21246	31962	31975	53653	53653					0.04243184505912723
RGIPRNVK	8	Unmodified	_RGIPRNVK_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.769287109375	2	470.295968	938.577383	-0.60484	-0.00028445	2.6472	0.001245	2.0424	0.00096051	470.29720675548646	80.17	0.29539	80.696	80.569	80.864	0.52676					10	6	2	0	0	0	0.4196	1	9242	9242		55.504	0	1	73802	+		47499	21204	31963	31976	53654	53654					0.10563708356744428
RGIQGLKPP	9	Unmodified	_RGIQGLKPP_					0	0	0			REV__ENSG00000162545|ENST00000375078|CAMK2N1	REV__ENSG00000162545|ENST00000375078|CAMK2N1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.7458190917969	2	483.298176	964.581799	-0.17782	-8.594E-05	-0.34539	-0.00016693	-0.52321	-0.00025287	483.29763263620885	31.84	0.64146	31.967	31.604	32.246	0.12642					23	14	2	0	0	0	0.20789	1	2151	2151		19.997	4.355	1	128580	+		47500	20819	31964	31977	53655	53655					0.09809172779648634
RGIQHKLIITS	11	Unmodified	_RGIQHKLIITS_					0	0	0			REV__ENST00000601286.5_1_13:51463800-51479022:-|nuORF	REV__ENST00000601286.5_1_13:51463800-51479022:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5922546386719	3	422.594461	1264.76155	-0.62547	-0.00026432	-2.6174	-0.0011061	-3.2429	-0.0013704	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.74022	1	4980	4980		24.232	4.9691	1	1069500	+		47501	29317	31965	31978	53656	53656					0.13976431996798055
RGIRNRVF	8	Unmodified	_RGIRNRVF_					0	0	0			REV__ENSG00000152104|ENST00000366956|PTPN14	REV__ENSG00000152104|ENST00000366956|PTPN14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.3061828613281	2	509.306867	1016.59918	-0.80877	-0.00041191	-1.1535	-0.00058751	-1.9623	-0.00099942	509.30614096875837	93.406	1.6722	93.406	92.938	94.61	0					114	38	4	0	0	0	0.86288	1	9243	9243		26.796	1.3459	1	1703100	+		47502	20285	31966	31979	53657	53657					0.09154513105318074
RGIRNRVF	8	Unmodified	_RGIRNRVF_					0	0	0			REV__ENSG00000152104|ENST00000366956|PTPN14	REV__ENSG00000152104|ENST00000366956|PTPN14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.305908203125	2	509.306867	1016.59918	-0.05438	-2.7696E-05	-2.0775	-0.0010581	-2.1319	-0.0010858	509.3056675667054	93.221	1.5935	93.291	92.756	94.349	0.06987					113	37	4	0	0	0	0.86288	1	9654	9654		26.796	4.8362	1	2872400	+		47503	20285	31966	31979	53658	53658					0.09154513105318074
RGIRNRVF	8	Unmodified	_RGIRNRVF_					0	0	0			REV__ENSG00000152104|ENST00000366956|PTPN14	REV__ENSG00000152104|ENST00000366956|PTPN14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.3058166503906	2	509.306867	1016.59918	0.38214	0.00019463	-2.5509	-0.0012992	-2.1688	-0.0011046	509.30545060509706	93	1.7659	93.046	92.369	94.135	0.045448					129	41	4	0	0	0	0.86288	1	9794	9794		26.796	3.2734	1	3009900	+		47504	20285	31966	31979	53659	53659					0.09154513105318074
RGIRQLDLQD	10	Unmodified	_RGIRQLDLQD_					0	0	0			REV__nc|ENSG00000155508|Q9UFF9-2|CNOT8	REV__nc|ENSG00000155508|Q9UFF9-2|CNOT8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.2255554199219	3	405.226438	1212.65748	0.24596	9.9668E-05	1.2127	0.00049144	1.4587	0.0005911	405.2270170895955	26.888	0.52347	26.916	26.718	27.241	0.02817					52	25	3	0	0	0	0.86207	1	1041	1041		24.232	0.85391	1	70582	+		47505	20431	31967	31980	53660	53660					0.059661051692728506
RGIRQLDLQD	10	Unmodified	_RGIRQLDLQD_					0	0	0			REV__nc|ENSG00000155508|Q9UFF9-2|CNOT8	REV__nc|ENSG00000155508|Q9UFF9-2|CNOT8	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	405.226438	1212.65748	-1.9278	-0.00078118	-4.9278	-0.0019969	-6.8556	-0.0027781	405.55841312721435	26.468	0.11471	26.535	26.502	26.616	0.066877	-0.24768	-0.007654	NaN	24.232	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35242	+		47506	20431	31967	31980							0.059661051692728506
RGIRQLDLQD	10	Unmodified	_RGIRQLDLQD_					0	0	0			REV__nc|ENSG00000155508|Q9UFF9-2|CNOT8	REV__nc|ENSG00000155508|Q9UFF9-2|CNOT8	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	405.226438	1212.65748	0.24596	9.9668E-05	1.2127	0.00049144	1.4587	0.0005911	405.2270170895955	26.888	0.52347	26.916	26.718	27.241	0.02817	0.13353	-0.00018903	NaN	24.232	52	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70582	+		47507	20431	31967	31980							0.059661051692728506
RGISASLALSA	11	Unmodified	_RGISASLALSA_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.303466796875	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.66929	1	8586	8586		36.447	3.6343	1	9288900	+		47508	18894	31968	31981	53661	53661					0.07224530363282611
RGISASLALSA	11	Unmodified	_RGISASLALSA_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3035278320312	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.65746	2	9160	9160;9704		37.812	6.2817	1	13080000	+		47509	18894	31968	31981	53662;53663	53662					0.07224530363282611
RGISASLALSA	11	Unmodified	_RGISASLALSA_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3032836914062	2	523.303655	1044.59276	1.0264	0.00053713	-1.3248	-0.00069329	-0.29841	-0.00015616	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.70737	1	8807	8807		30.318	2.4355	1	3817300	+		47510	18894	31968	31981	53664	53664					0.07224530363282611
RGISASLALSA	11	Unmodified	_RGISASLALSA_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.69995	2	8690	8690;8857		31.53	0	1	13442000	+		47511	18894	31968	31981	53665;53666	53665					0.07224530363282611
RGISASLALSA	11	Unmodified	_RGISASLALSA_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.303466796875	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.61369	1	8799	8799		42.864	5.0528	1	12189000	+		47512	18894	31968	31981	53667	53667					0.07224530363282611
RGISASLALSA	11	Unmodified	_RGISASLALSA_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3036499023438	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.60058	1	10725	10725		44.377	6.5657	1	11944000	+		47513	18894	31968	31981	53668	53668					0.07224530363282611
RGISKGKS	8	Unmodified	_RGISKGKS_					0	0	0		L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|19|2|sense	L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|19|2|sense	L1M4b_dup409|chr2:99315365-99316132:-|1.1482252863481537|0.2824116377342518|2.02|63.0|19|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.7547607421875	2	416.753601	831.49265	0.44827	0.00018682	3.2079	0.0013369	3.6562	0.0015237	416.75482420878427	69.04	0.8387	69.169	68.79	69.629	0.12838					83	36	3	0	0	0	0.90983	1	6231	6231		42.396	11.892	1	1117600			47514	14523	31969	31982	53669	53669					0.07016337820141416
RGITGTAPP	9	Unmodified	_RGITGTAPP_					0	0	0			REV__ENST00000403625.6_1_5:66462457-66462550:+|nuORF	REV__ENST00000403625.6_1_5:66462457-66462550:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2455139160156	2	435.245609	868.476666	-0.74855	-0.0003258	0.65444	0.00028484	-0.094112	-4.0962E-05	435.2457494614933	47.227	1.0811	48.151	47.783	48.864	0.92315					74	26	4	0	0	0	0.51307	1	4507	4507		51.335	0	1	7740400	+		47515	26277	31970	31983	53670	53670					0.037166315832337204
RGITRFSTKK	10	Unmodified	_RGITRFSTKK_					0	0	0			REV__ENST00000558735.1_1_15:44581347-44620963:+|nuORF	REV__ENST00000558735.1_1_15:44581347-44620963:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.3580932617188	2	597.359296	1192.70404	-0.24184	-0.00014447	-1.7236	-0.0010296	-1.9655	-0.0011741	597.3578636523395	100.56	3.0718	100.56	99.06	102.13	0					172	73	4	0	0	0	0.86348	1	10170	10170		31.53	3.4483	1	2923800	+		47516	28736	31971	31984	53671	53671					0.115395897911867
RGITRFSTKK	10	Unmodified	_RGITRFSTKK_					0	0	0			REV__ENST00000558735.1_1_15:44581347-44620963:+|nuORF	REV__ENST00000558735.1_1_15:44581347-44620963:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.3587036132812	2	597.359296	1192.70404	-0.45682	-0.00027289	-1.281	-0.00076525	-1.7379	-0.0010381	597.3582006630761	100.19	3.2446	100.23	98.977	102.22	0.046349					174	76	4	0	0	0	0.77314	2	10721	10709;10721		40.778	12.697	1	4145900	+		47517	28736	31971	31984	53672;53673	53673					0.115395897911867
RGITRFSTKK	10	Unmodified	_RGITRFSTKK_					0	0	0			REV__ENST00000558735.1_1_15:44581347-44620963:+|nuORF	REV__ENST00000558735.1_1_15:44581347-44620963:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.3580932617188	2	597.359296	1192.70404	0.94282	0.0005632	-2.9089	-0.0017377	-1.9661	-0.0011744	597.3571269689473	100.1	2.8225	100.31	99.04	101.86	0.21512					167	67	4	0	0	0	0.86763	2	10408	10408;10431		26.693	2.1737	1	2588300	+		47518	28736	31971	31984	53674;53675	53674					0.115395897911867
RGITRFSTKK	10	Unmodified	_RGITRFSTKK_					0	0	0			REV__ENST00000558735.1_1_15:44581347-44620963:+|nuORF	REV__ENST00000558735.1_1_15:44581347-44620963:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.3590698242188	2	597.359296	1192.70404	-1.2979	-0.00077532	-0.78886	-0.00047123	-2.0868	-0.0012466	597.3583970456502	100.18	2.7493	100.35	98.666	101.42	0.17199					156	64	4	0	0	0	0.82886	2	10386	10375;10386		37.812	6.2817	1	2737400	+		47519	28736	31971	31984	53676;53677	53677					0.115395897911867
RGITWERKRLL	11	Unmodified	_RGITWERKRLL_					0	0	0			REV__ENST00000535181.5_1_12:133448808-133463914:-|nuORF	REV__ENST00000535181.5_1_12:133448808-133463914:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.95904541015625	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.77205	1	12353	12353		17.167	0.44936	1	2577100	+		47520	16651	31972	31985	53678	53678					0.15574901045056322
RGIVLNNPRK	10	Unmodified	_RGIVLNNPRK_					0	0	0			REV__ENSG00000197498|ENST00000441448|RPF2	REV__ENSG00000197498|ENST00000441448|RPF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	583.8585205078125	2	583.859464	1165.70437	0.74064	0.00043243	-1.7526	-0.0010233	-1.012	-0.00059086	583.8582354915881	98.447	2.0436	98.675	98.127	100.17	0.22788					107	47	4	0	0	0	0.86763	1	10218	10218		26.693	0.62953	1	1023000	+		47521	23240	31973	31986	53679	53679					0.12815009511041353
RGIVQLLD	8	Unmodified	_RGIVQLLD_					0	0	0			REV__ENST00000392722.3_1_X:100793474-100793738:-|nuORF	REV__ENST00000392722.3_1_X:100793474-100793738:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2637634277344	2	457.276909	912.539266	-1.4551	-0.00066536	4.3361	0.0019828	2.8811	0.0013174	457.2780349704945	79.518	0.10957	79.617	79.552	79.661	0.098701					5	3	2	0	0	0	0.4196	1	7500	7500		15.642	0	1	14540	+		47522	26030	31974	31987	53680	53680					0.07949777651424483
RGKAKKKK	8	Unmodified	_RGKAKKKK_					0	0	0		ENST00000321870.2_1_8:65492938-65493277:+|nuORF	ENST00000321870.2_1_8:65492938-65493277:+|nuORF	ENST00000321870.2_1_8:65492938-65493277:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2875671386719	2	472.329811	942.645068	-0.97294	-0.00045955	2.1738	0.0010268	1.2009	0.0005672	472.3310604515974	95.598	0.2132	95.598	95.529	95.742	0					7	4	2	0	0	0	0.4196	1	9529	9529		0	0	1	127520			47523	10043	31975	31988	53681	53681					0.17145158287542017
RGKALQLHRHK	11	Unmodified	_RGKALQLHRHK_					0	0	0			REV__ENST00000409123.5_1_7:29874333-29915507:+|nuORF	REV__ENST00000409123.5_1_7:29874333-29915507:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.6089172363281	3	448.609216	1342.80582	-1.309	-0.00058724	1.7264	0.00077449	0.41742	0.00018726	448.60976401690687	76.777	1.1377	76.902	76.414	77.552	0.12485					110	49	3	0	0	0	0.73647	1	7211	7211		25.068	7.2346	1	879130	+		47524	26334	31976	31989	53682	53682					0.14812880933618544
RGKARPLP	8	Unmodified	_RGKARPLP_					0	0	0		nc|ENSG00000127483|Q5SSJ5-3|HP1BP3;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;ENSG00000127483|ENST00000438032|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.7716979980469	2	447.785236	893.555919	0.21117	9.4558E-05	3.9526	0.0017699	4.1638	0.0018645	447.78689018874115	40.955	2.609	41.033	40.085	42.694	0.078365					165	79	3	0	0	0	0.4196	1	2611	2611		8.2313	0	1	871290			47525	3500	31977	31990	53683	53683					0.10488323328013394
RGKCLVSCF	9	2 Carbamidomethyl (C)	_RGKC(Carbamidomethyl (C))LVSC(Carbamidomethyl (C))F_	RGKC(1)LVSC(1)F		RGKC(51)LVSC(51)F		0	2	0		ENST00000307602.8_1_8:42879272-42879317:+|nuORF	ENST00000307602.8_1_8:42879272-42879317:+|nuORF	ENST00000307602.8_1_8:42879272-42879317:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.7777099609375	2	563.778436	1125.54232	-0.042612	-2.4024E-05	-0.65313	-0.00036822	-0.69574	-0.00039224	563.7777650447418	25.71	0.5638	25.669	25.415	25.979	-0.04117					29	14	3	0	0	0	0.51307	1	1111	1111		51.335	9.9088	1	74922			47526	9874	31978	31991	53684	53684	127;128				-0.015430385577246852
RGKGGLVF	8	Unmodified	_RGKGGLVF_					0	0	0			REV__ENST00000359195.3_1_7:106505947-106508023:+|nuORF	REV__ENST00000359195.3_1_7:106505947-106508023:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.25189208984375	2	417.253237	832.491922	-0.040205	-1.6776E-05	-0.42783	-0.00017851	-0.46804	-0.00019529	417.25296314698	35.536	1.154	35.476	35.254	36.408	-0.060333					58	32	2	0	0	0	0.81548	1	1928	1928		20.482	5.8177	1	236350	+		47527	25453	31979	31992	53685	53685					0.06897543171089637
RGKGKRSS	8	Unmodified	_RGKGKRSS_					0	0	0			REV__ENSG00000146197|ENST00000274938|SCUBE3	REV__ENSG00000146197|ENST00000274938|SCUBE3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2647399902344	2	438.262125	874.509697	0.19585	8.5835E-05	1.4584	0.00063916	1.6542	0.00072499	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.81897	1	2859	2859		20.947	0.4651	1	22029000	+		47528	19992	31980	31993	53686	53686					0.06742258425936143
RGKLLETAMIE	11	Unmodified	_RGKLLETAMIE_					0	0	0			REV__ENSG00000081248|ENST00000362061|CACNA1S	REV__ENSG00000081248|ENST00000362061|CACNA1S	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.8496704101562	2	630.852655	1259.69076	-0.1784	-0.00011254	-4.4452	-0.0028043	-4.6236	-0.0029168	630.8497127634344	110.75	1.3676	110.7	110.4	111.77	-0.057182					112	42	4	0	0	0	0.70737	1	12091	12091		30.318	3.6248	1	825620	+		47529	16822	31981	31994	53687	53687					0.07129970896971827
RGKRKHRAEK	10	Unmodified	_RGKRKHRAEK_					0	0	0		ENST00000261942.6_1_5:175934391-175934511:+|nuORF	ENST00000261942.6_1_5:175934391-175934511:+|nuORF	ENST00000261942.6_1_5:175934391-175934511:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59228515625	3	422.593566	1264.75887	0.36096	0.00015254	-2.4457	-0.0010335	-2.0847	-0.00088099	422.59247958124973	59.467	1.1073	59.581	58.945	60.053	0.11396					46	36	2	0	0	0	0.86621	1	5090	5090		26.063	1.7875	1	119250			47530	9424	31982	31995	53688	53688					0.13708021382490188
RGKRVRWLF	9	Unmodified	_RGKRVRWLF_					0	0	0			REV__ENST00000480340.1_1_1:153902104-153902251:-|nuORF	REV__ENST00000480340.1_1_1:153902104-153902251:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.5798034667969	3	406.58412	1216.73053	-1.927	-0.00078348	1.6612	0.0006754	-0.26583	-0.00010808	406.58477414221215	112.11	0.72639	112.09	111.83	112.55	-0.01989					36	23	2	0	0	0	0.7932	1	11920	11920		19.104	1.2704	1	4313100	+		47531	27414	31983	31996	53689	53689					0.1308332347321084
RGKRVRWLF	9	Unmodified	_RGKRVRWLF_					0	0	0			REV__ENST00000480340.1_1_1:153902104-153902251:-|nuORF	REV__ENST00000480340.1_1_1:153902104-153902251:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5843505859375	3	406.58412	1216.73053	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.61	1	111.65	111.15	112.15	0.041832								0	0	0	0.33394	1	13503	13503		19.104	2.3861	1		+		47532	27414	31983	31996	53690	53690					0.1308332347321084
RGKWKSKA	8	Unmodified	_RGKWKSKA_					0	0	0			REV__chr3:9757621-9759488|34|10.32|0.32|5.03|-|0|CAMK1,CAMK1|1	REV__chr3:9757621-9759488|34|10.32|0.32|5.03|-|0|CAMK1,CAMK1|1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.7876281738281	2	480.790518	959.566484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.777	1	21.72	21.22	22.22	-0.057203								0	0	0	0.29631	1	627	627		25.45	2.4077	1		+		47533	15813	31984	31997	53691	53691					0.08508305982456932
RGLAAPAAR	9	Unmodified	_RGLAAPAAR_					0	0	0		ENST00000513185.1_1_5:98109449-98109824:+|nuORF	ENST00000513185.1_1_5:98109449-98109824:+|nuORF	ENST00000513185.1_1_5:98109449-98109824:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7680358886719	2	441.767043	881.519533	4.6911	0.0020724	-2.6105	-0.0011532	2.0806	0.00091914	441.76590394209916	107.02	1.0661	107.17	106.81	107.88	0.14929					95	39	4	0	0	0	0.78536	1	13123	13123		29.15	2.3535	1	3173300			47534	13045	31985	31998	53692	53692					0.07403446431305838
RGLAFSVAIL	10	Unmodified	_RGLAFSVAIL_					0	0	0		nc|ENSG00000214826|Q92771|DDX12P	nc|ENSG00000214826|Q92771|DDX12P	nc|ENSG00000214826|Q92771|DDX12P	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3033447265625	2	523.821484	1045.62842	-0.16891	-8.8478E-05	2.6245	0.0013747	2.4556	0.0012863	523.8234479948524	88.01	0.25119	88.211	88.016	88.267	0.20115					8	5	2	0	0	0	0.37624	1	8717	8717		27.882	4.8398	1	47695			47535	15251	31986	31999	53693	53693					0.1074261261094307
RGLAGFLPTCI	11	Unmodified	_RGLAGFLPTCI_					0	0	0		ENST00000523352.1_1_8:95884148-95885795:+|nuORF	ENST00000523352.1_1_8:95884148-95885795:+|nuORF	ENST00000523352.1_1_8:95884148-95885795:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.319580078125	2	574.318251	1146.62195	-0.44784	-0.0002572	2.6867	0.001543	2.2389	0.0012858	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.60058	2	9343	9343;9473		44.377	1.5129	1	1099700			47536	13199	31987	32000	53694;53695	53694					0.05450351387912633
RGLAGFLPTCI	11	Unmodified	_RGLAGFLPTCI_					0	0	0		ENST00000523352.1_1_8:95884148-95885795:+|nuORF	ENST00000523352.1_1_8:95884148-95885795:+|nuORF	ENST00000523352.1_1_8:95884148-95885795:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.319091796875	2	574.318251	1146.62195	2.1223	0.0012189	-0.035188	-2.0209E-05	2.0871	0.0011987	574.3181422905453	94.479	4.1031	94.419	93.372	97.475	-0.059204					230	96	5	0	0	0	0.65746	2	10014	10014;10122		37.812	6.2817	1	1734300			47537	13199	31987	32000	53696;53697	53696					0.05450351387912633
RGLALDGKLKH	11	Unmodified	_RGLALDGKLKH_					0	0	0		nc|ENSG00000141480|P32121-5|ARRB2;nc|ENSG00000141480|P32121-2|ARRB2;ENSG00000141480|ENST00000269260|ARRB2;nc|ENSG00000141480|P32121-3|ARRB2;nc|ENSG00000141480|P32121-4|ARRB2;ENST00000529741.1_1_11:74983937-74987896:-|nuORF;ENST00000576235.1_1_17:4621317-4623595:+|nuORF;ENST00000531012.1_1_11:74982743-74985434:-|nuORF;nc|ENSG00000137486|P49407-2|ARRB1;ENSG00000137486|ENST00000420843|ARRB1;nc|ENSG00000120500|P36575-2|ARR3;ENSG00000120500|ENST00000307959|ARR3	nc|ENSG00000141480|P32121-5|ARRB2;nc|ENSG00000120500|P36575-2|ARR3	nc|ENSG00000120500|P36575-2|ARR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3666381835938	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.732	1	11659	11659		26.063	0	1	64334000			47538	4504;3133	31988	32001	53698	53698					0.12459876308253115
RGLCAKIAKF	10	Unmodified	_RGLCAKIAKF_					0	0	0			REV__ENSG00000132749|ENST00000255087|TESMIN	REV__ENSG00000132749|ENST00000255087|TESMIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8309936523438	2	553.828786	1105.64302	1.287	0.00071279	1.2184	0.00067476	2.5054	0.0013876	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.86763	1	9492	9492		26.693	8.3685	1	5348100	+		47539	19027	31989	32002	53699	53699					0.09442361487413109
RGLCAKIAKF	10	Unmodified	_RGLCAKIAKF_					0	0	0			REV__ENSG00000132749|ENST00000255087|TESMIN	REV__ENSG00000132749|ENST00000255087|TESMIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8305053710938	2	553.828786	1105.64302	-1.3791	-0.00076379	4.3377	0.0024024	2.9586	0.0016386	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.8608	1	10781	10781		34.173	6.2903	1	5911200	+		47540	19027	31989	32002	53700	53700					0.09442361487413109
RGLCLVALL	9	Unmodified	_RGLCLVALL_					0	0	0			REV__ENSG00000165782|ENST00000250489|PIP4P1	REV__ENSG00000165782|ENST00000250489|PIP4P1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27740478515625	2	479.29933	956.584108	-0.79177	-0.0003795	3.4878	0.0016717	2.696	0.0012922	479.30088325379955	84.377	0.12955	84.436	84.328	84.457	0.05925					4	2	2	0	0	0	0.20789	1	8507	8507		25.45	7.1258	1	29672	+		47541	21216	31990	32003	53701	53701					0.10407885193103539
RGLEIHSK	8	Unmodified	_RGLEIHSK_					0	0	0		nc|ENSG00000167632|Q96Q05-3|TRAPPC9;ENSG00000167632|ENST00000438773|TRAPPC9;nc|ENSG00000167632|Q96Q05-2|TRAPPC9;ENST00000521667.5_1_8:140743306-141301208:-|nuORF	nc|ENSG00000167632|Q96Q05-3|TRAPPC9	nc|ENSG00000167632|Q96Q05-3|TRAPPC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.2720031738281	2	470.272158	938.529764	0.099415	4.6752E-05	-0.22805	-0.00010725	-0.12864	-6.0495E-05	470.2720226453988	92.144	2.4368	92.19	91.141	93.578	0.045456					134	57	4	0	0	0	0.88601	1	9590	9590		34.173	5.023	1	1955400			47542	6310	31991	32004	53702	53702					0.058040093658974
RGLFAFVWGV	10	Unmodified	_RGLFAFVWGV_					0	0	0			REV__ENST00000579695.5_1_17:38078188-38078341:-|nuORF	REV__ENST00000579695.5_1_17:38078188-38078341:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8428344726562	2	576.321651	1150.62875	-0.98866	-0.00056978	1.8488	0.0010655	0.8601	0.00049569	576.3210542262574	92.683	0.21438	92.752	92.67	92.884	0.06987					6	4	2	0	0	0	0.37624	1	9610	9610		29.15	12.676	1	15590	+		47543	29034	31992	32005	53703	53703					0.059460323307803264
RGLFAWLIP	9	Unmodified	_RGLFAWLIP_					0	0	0		ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	ENSG00000174844|ENST00000495027|DNAH12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	537.7794799804688	2	536.818744	1071.62294	0.32723	0.00017566	1.8024	0.00096757	2.1297	0.0011432	537.3233363652593	44.037	0.17385	44.094	44.01	44.184	0.056744					5	3	2	0	0	0	0.20789	1	3074	3074		31.955	0	1	30520			47544	6969	31993	32006	53704	53704					0.08998933819134436
RGLFVAVFAGI	11	Unmodified	_RGLFVAVFAGI_					0	0	0			REV__ENST00000554295.1_1_12:98849015-98849897:-|nuORF	REV__ENST00000554295.1_1_12:98849015-98849897:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3457641601562	2	575.342584	1148.67061	2.6142	0.0015041	2.7738	0.0015959	5.388	0.0031	575.3441275619858	98.676	2.5508	98.621	98.113	100.66	-0.054825					162	58	5	0	0	0	0.75495	1	10614	10614		20.947	0	1	4409300	+		47545	28662	31994	32007	53705	53705					0.10222588019314571
RGLGAKGLFAM	11	Unmodified	_RGLGAKGLFAM_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|264|2|anti-sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|264|2|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.820068359375	2	560.818418	1119.62228	2.0312	0.0011391	0.45892	0.00025737	2.4901	0.0013965	560.8185510503406	92.547	2.8653	92.482	91.358	94.223	-0.06414					202	67	4	0	0	0	0.7342	1	9793	9793		25.574	3.6142	1	788180	+		47546	29443	31995	32008	53706	53706					0.06725771107767287
RGLGALKNGP	10	Unmodified	_RGLGALKNGP_					0	0	0			REV__nc|ENSG00000105672|O00321-2|ETV2	REV__nc|ENSG00000105672|O00321-2|ETV2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79534912109375	2	491.793258	981.571963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.115	1	73.246	72.746	73.746	0.13064								0	0	0	0.45132	1	6735	6735		40.778	6.6056	1		+		47547	29759	31996	32009	53707	53707					0.08043984774280943
RGLGFRVA	8	Unmodified	_RGLGFRVA_					0	0	0		ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2634582519531	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.88915	1	2713	2713		35.201	1.6851	1	3384400			47548	12913	31997	32010	53708	53708					0.07144347919643224
RGLGFRVA	8	Unmodified	_RGLGFRVA_					0	0	0		ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2633056640625	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.884	1	2487	2487		33.516	0.70317	1	3673500			47549	12913	31997	32010	53709	53709					0.07144347919643224
RGLGFRVA	8	Unmodified	_RGLGFRVA_					0	0	0		ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26336669921875	2	438.264136	874.51372	-1.0936	-0.00047928	-0.34853	-0.00015275	-1.4421	-0.00063203	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.86288	1	2708	2708		26.796	1.3459	1	2862500			47550	12913	31997	32010	53710	53710					0.07144347919643224
RGLGFRVA	8	Unmodified	_RGLGFRVA_					0	0	0		ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2632751464844	2	438.264136	874.51372	-0.25936	-0.00011367	-1.4504	-0.00063564	-1.7097	-0.00074931	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.91005	1	2525	2525		42.474	0	1	2361100			47551	12913	31997	32010	53711	53711					0.07144347919643224
RGLGFRVA	8	Unmodified	_RGLGFRVA_					0	0	0		ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.263427734375	2	438.264136	874.51372	-1.5833	-0.00069392	-0.15448	-6.7702E-05	-1.7378	-0.00076162	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.88915	1	1955	1955		35.201	1.6851	1	11160000			47552	12913	31997	32010	53712	53712					0.07144347919643224
RGLGFRVA	8	Unmodified	_RGLGFRVA_					0	0	0		ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2627258300781	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.88915	2	2666	2666;2676		35.201	0	1	22924000			47553	12913	31997	32010	53713;53714	53713					0.07144347919643224
RGLGFRVA	8	Unmodified	_RGLGFRVA_					0	0	0		ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.263427734375	2	438.264136	874.51372	0.27759	0.00012166	-2.5692	-0.001126	-2.2916	-0.0010043	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.91005	1	2713	2713		42.474	1.9018	1	85249000			47554	12913	31997	32010	53715	53715					0.07144347919643224
RGLGFRVA	8	Unmodified	_RGLGFRVA_					0	0	0		ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	ENST00000504821.1_1_5:175813909-175815568:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.263916015625	2	438.264136	874.51372	1.5783	0.00069171	-3.9402	-0.0017268	-2.3619	-0.0010351	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.884	1	2797	2797		33.516	0	1	92475000			47555	12913	31997	32010	53716	53716					0.07144347919643224
RGLGGPPRPR	10	Unmodified	_RGLGGPPRPR_					0	0	0			REV__ENST00000535977.5_1_16:678431-678971:+|nuORF	REV__ENST00000535977.5_1_16:678431-678971:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8165283203125	2	531.817599	1061.62064	0.70533	0.00037511	-2.1628	-0.0011502	-1.4575	-0.00077513	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.86348	1	8505	8505		31.53	1.0262	1	1163300	+		47556	28399	31998	32011	53717	53717					0.09229898134026371
RGLGGVSHG	9	Unmodified	_RGLGGVSHG_					0	0	0			REV__ENST00000405546.7_1_2:242612193-242612451:+|nuORF	REV__ENST00000405546.7_1_2:242612193-242612451:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2275390625	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.74721	1	7689	7689		37.159	1.5408	1	743780	+		47557	26294	31999	32012	53718	53718					0.015265941262327942
RGLGKLLL	8	Unmodified	_RGLGKLLL_					0	0	0			REV__ENSG00000143315|ENST00000368090|PIGM	REV__ENSG00000143315|ENST00000368090|PIGM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3005065917969	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.85787	1	7783	7783		9.4706	0	1	6323600	+		47558	19789	32000	32013	53719	53719					0.14627262273359065
RGLGPHSK	8	Unmodified	_RGLGPHSK_					0	0	0		ENSG00000164694|ENST00000297267|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.24603271484375	2	426.245944	850.477334	2.6022	0.0011092	-2.3558	-0.0010042	0.24641	0.00010503	426.2448505635507	87.493	3.3011	87.546	86.187	89.488	0.053024					131	77	2	0	0	0	0.8537	1	8982	8982		25.574	5.0922	1	4266000			47559	5993	32001	32014	53720	53720					0.0461147102294035
RGLGVQLL	8	Unmodified	_RGLGVQLL_					0	0	0		nc|ENSG00000114904|P51957-3|NEK4;ENSG00000114904|ENST00000233027|NEK4;nc|ENSG00000114904|P51957-2|NEK4	nc|ENSG00000114904|P51957-3|NEK4	nc|ENSG00000114904|P51957-3|NEK4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.26141357421875	2	428.27417	854.533787	0.6434	0.00027555	3.5154	0.0015055	4.1588	0.0017811	428.2758129894289	90.743	0.71663	90.896	90.471	91.188	0.15388					37	17	3	0	0	0	0.4196	1	9057	9057		16.473	0	1	446590			47560	2798	32002	32015	53721	53721					0.1007009885960315
RGLHERIAIV	10	Unmodified	_RGLHERIAIV_					0	0	0			REV__ENSG00000187550|ENST00000413299|SBK2	REV__ENSG00000187550|ENST00000413299|SBK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3551025390625	2	582.354014	1162.69348	0.16989	9.8934E-05	-0.87197	-0.0005078	-0.70208	-0.00040886	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.85466	1	12710	12710		20.947	2.6225	1	635410	+		47561	22923	32003	32016	53722	53722					0.1186360713677459
RGLHLGHQK	9	Unmodified	_RGLHLGHQK_					0	0	0		ENSG00000175322|ENST00000590202|ZNF519	ENSG00000175322|ENST00000590202|ZNF519	ENSG00000175322|ENST00000590202|ZNF519	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3045654296875	2	523.304324	1044.5941	0.69703	0.00036476	-2.3416	-0.0012254	-1.6446	-0.00086061	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.78983	1	8356	8356		27.882	1.1893	1	3801600			47562	7007	32004	32017	53723	53723					0.0735820924271593
RGLHPAPFPSI	11	Unmodified	_RGLHPAPFPSI_					0	0	0		ENST00000485069.1_1_2:220336438-220336879:+|nuORF	ENST00000485069.1_1_2:220336438-220336879:+|nuORF	ENST00000485069.1_1_2:220336438-220336879:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3323364257812	2	596.33529	1190.65603	-0.30561	-0.00018224	-3.6958	-0.002204	-4.0015	-0.0023862	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.66929	1	9758	9758		36.447	3.6343	1	740920			47563	12547	32005	32018	53724	53724					0.06832515871178657
RGLIRPSD	8	Unmodified	_RGLIRPSD_					0	0	0			REV__ENST00000547364.1_1_19:58514673-58520859:+|nuORF	REV__ENST00000547364.1_1_19:58514673-58520859:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2626647949219	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.88601	1	9752	9752		34.173	0	1	4402400	+		47564	28549	32006	32019	53725	53725					0.054357228488470355
RGLKGDRG	8	Unmodified	_RGLKGDRG_					0	0	0		ENSG00000114270|ENST00000681320|COL7A1;nc|ENSG00000114270|Q02388-2|COL7A1;ENST00000487017.5_1_3:48609337-48621784:-|nuORF	ENSG00000114270|ENST00000681320|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7505187988281	2	429.74885	857.483148	1.5892	0.00068294	2.5388	0.001091	4.128	0.001774	429.74995933180253	34.855	1.9588	35.237	34.934	36.893	0.3812					144	49	4	0	0	0	0.87259	1	2611	2611		58.782	0.97068	1	5947200			47565	2764	32007	32020	53726	53726					0.04870569534614333
RGLKRFQAN	9	Unmodified	_RGLKRFQAN_					0	0	0		ENST00000593157.5_1_19:13216299-13227549:-|nuORF;nc|ENSG00000104907|Q9NXH9-2|TRMT1;ENSG00000104907|ENST00000357720|TRMT1	ENST00000593157.5_1_19:13216299-13227549:-|nuORF	ENST00000593157.5_1_19:13216299-13227549:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3169555664062	2	545.317432	1088.62031	1.1684	0.00063715	-2.5262	-0.0013776	-1.3578	-0.00074041	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.74721	1	8923	8923		37.159	6.6555	1	4705800			47566	14305	32008	32021	53727	53727					0.07954478414194455
RGLLAGGR	8	Unmodified	_RGLLAGGR_					0	0	0		nc|ENSG00000111785|Q9NVN3-3|RIC8B;nc|ENSG00000111785|Q9NVN3|RIC8B;nc|ENSG00000111785|Q9NVN3-1|RIC8B;ENSG00000111785|ENST00000392837|RIC8B;nc|ENSG00000111785|Q9NVN3-4|RIC8B	nc|ENSG00000111785|Q9NVN3-3|RIC8B	nc|ENSG00000111785|Q9NVN3-3|RIC8B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.24884033203125	2	400.248486	798.48242	0.55585	0.00022248	0.35523	0.00014218	0.91109	0.00036466	400.2484529763441	24.6	0.84744	24.655	24.318	25.165	0.055025					44	24	3	0	0	0	0.88915	1	938	938		35.201	3.6218	1	85580			47567	2612	32009	32022	53728	53728					0.07511774885574596
RGLLFPVV	8	Unmodified	_RGLLFPVV_					0	0	0		ENST00000519369.1_1_8:56986247-56986352:-|nuORF	ENST00000519369.1_1_8:56986247-56986352:-|nuORF	ENST00000519369.1_1_8:56986247-56986352:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.78778076171875	2	450.786913	899.559273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.01	1	109.96	109.46	110.46	-0.055084								0	0	0	0.29199	1	11964	11964		29.842	0.69198	1				47568	13134	32010	32023	53729	53729					0.10547573382029896
RGLLFSPAP	9	Unmodified	_RGLLFSPAP_					0	0	0		nc|ENSG00000160323|Q76LX8|ADAMTS13	nc|ENSG00000160323|Q76LX8|ADAMTS13	nc|ENSG00000160323|Q76LX8|ADAMTS13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2760009765625	2	479.279452	956.544351	-1.0476	-0.00050211	-2.956	-0.0014168	-4.0037	-0.0019189	479.27794521109934	87.608	3.0549	87.608	87.076	90.13	0					149	70	3	0	0	0	0.78536	1	8396	8396		29.15	2.3535	1	645930			47569	15039	32011	32024	53730	53730					0.06434081514032641
RGLLFSPAP	9	Unmodified	_RGLLFSPAP_					0	0	0		nc|ENSG00000160323|Q76LX8|ADAMTS13	nc|ENSG00000160323|Q76LX8|ADAMTS13	nc|ENSG00000160323|Q76LX8|ADAMTS13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2774353027344	2	479.279452	956.544351	-0.72512	-0.00034753	-3.4808	-0.0016683	-4.2059	-0.0020158	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.62081	1	9504	9504		45.952	5.1738	1	1822400			47570	15039	32011	32024	53731	53731					0.06434081514032641
RGLLFSPAP	9	Unmodified	_RGLLFSPAP_					0	0	0		nc|ENSG00000160323|Q76LX8|ADAMTS13	nc|ENSG00000160323|Q76LX8|ADAMTS13	nc|ENSG00000160323|Q76LX8|ADAMTS13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27825927734375	2	479.279452	956.544351	-0.95082	-0.00045571	-3.0433	-0.0014586	-3.9941	-0.0019143	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.74721	1	10140	10140		37.159	0	1	6350300			47571	15039	32011	32024	53732	53732					0.06434081514032641
RGLLLAREE	9	Unmodified	_RGLLLAREE_					0	0	0			REV__ENST00000562258.5_1_15:42452954-42456706:-|nuORF	REV__ENST00000562258.5_1_15:42452954-42456706:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.760498046875	2	528.811648	1055.60874	0.9126	0.00048259	-1.3305	-0.0007036	-0.41794	-0.00022101	529.3115455476683	50.191	0.49519	50.638	50.431	50.926	0.44761					15	11	2	0	0	0	0.20789	1	4968	4968		20.947	0	1	64570	+		47572	21334	32012	32025	53733	53733					0.08316236600194316
RGLLPLFN	8	Unmodified	_RGLLPLFN_					0	0	0			REV__ENST00000311085.8_2_5:118450207-118451868:+|nuORF	REV__ENST00000311085.8_2_5:118450207-118451868:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.28009033203125	2	465.281995	928.549437	-1.1036	-0.00051349	-3.1369	-0.0014595	-4.2405	-0.001973	465.28037254514356	89.207	2.109	89.207	88.71	90.819	0					110	48	4	0	0	0	0.87922	1	8649	8649		31.955	0.42505	1	1091500	+		47573	24899	32013	32026	53734	53734					0.08230385376668892
RGLLPLFN	8	Unmodified	_RGLLPLFN_					0	0	0			REV__ENST00000311085.8_2_5:118450207-118451868:+|nuORF	REV__ENST00000311085.8_2_5:118450207-118451868:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.2797546386719	2	465.281995	928.549437	-1.4902	-0.00069338	-2.801	-0.0013033	-4.2912	-0.0019966	465.28061982816973	88.721	1.2176	89.191	88.797	90.015	0.47068					80	29	4	0	0	0	0.87922	1	10507	10507		31.955	5.1588	1	1086000	+		47574	24899	32013	32026	53735	53735					0.08230385376668892
RGLLQKVF	8	Unmodified	_RGLLQKVF_					0	0	0		ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3;ENST00000426414.6_1_4:85730999-85781744:-|nuORF	ENSG00000163625|ENST00000295888|WDFY3	ENSG00000163625|ENST00000295888|WDFY3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8009338378906	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.85277	1	9554	9554		25.45	0	1	7439400			47575	5839	32014	32027	53736	53736					0.1102236078503438
RGLLQKVF	8	Unmodified	_RGLLQKVF_					0	0	0		ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3;ENST00000426414.6_1_4:85730999-85781744:-|nuORF	ENSG00000163625|ENST00000295888|WDFY3	ENSG00000163625|ENST00000295888|WDFY3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.8011474609375	2	480.803094	959.591636	-0.79097	-0.0003803	-4.038	-0.0019415	-4.829	-0.0023218	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.86288	1	9816	9816		26.796	0	1	18644000			47576	5839	32014	32027	53737	53737					0.1102236078503438
RGLLQSRLPAP	11	Unmodified	_RGLLQSRLPAP_					0	0	0			REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3665771484375	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.66929	1	11442	11442		36.447	4.9169	1	63350000	+		47577	26372	32015	32028	53738	53738					0.12459876308275852
RGLLQSRLPAP	11	Unmodified	_RGLLQSRLPAP_					0	0	0			REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3665161132812	2	604.367121	1206.71969	3.2045	0.0019367	-4.3338	-0.0026192	-1.1294	-0.00068255	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.66929	1	11630	11630		36.447	1.2947	1	63446000	+		47578	26372	32015	32028	53739	53739					0.12459876308275852
RGLLQSRLPAP	11	Unmodified	_RGLLQSRLPAP_					0	0	0			REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.366455078125	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.67778	3	11465	11465;11623;11635		35.152	3.6222	1	64334000	+		47579	26372	32015	32028	53740;53741;53742	53740					0.12459876308275852
RGLLQSRLPAP	11	Unmodified	_RGLLQSRLPAP_					0	0	0			REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3668212890625	2	604.367121	1206.71969	1.0484	0.00063359	-2.1061	-0.0012728	-1.0577	-0.00063923	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.66929	2	11205	11205;11385		36.447	3.6962	1	105850000	+		47580	26372	32015	32028	53743;53744	53743					0.12459876308275852
RGLLQSRLPAP	11	Unmodified	_RGLLQSRLPAP_					0	0	0			REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3668212890625	2	604.367121	1206.71969	-1.2751	-0.0007706	0.20453	0.00012361	-1.0705	-0.00064699	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.7144	2	11180	11180;11325		29.17	4.4887	1	103250000	+		47581	26372	32015	32028	53745;53746	53745					0.12459876308275852
RGLLQSRLPAP	11	Unmodified	_RGLLQSRLPAP_					0	0	0			REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.365966796875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.6921	1	12577	12577		32.812	0	1	3346600	+		47582	26372	32015	32028	53747	53747					0.12459876308275852
RGLLQSRLPAP	11	Unmodified	_RGLLQSRLPAP_					0	0	0			REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	REV__ENST00000412023.5_1_12:6982564-6991452:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3667602539062	2	604.367121	1206.71969	3.6458	0.0022034	-4.4074	-0.0026637	-0.76167	-0.00046033	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.72106	1	12716	12716		28.081	0	1	5883900	+		47583	26372	32015	32028	53748	53748					0.12459876308275852
RGLLRDGPG	9	Unmodified	_RGLLRDGPG_					0	0	0		ENST00000477275.1_1_10:133959024-133981894:+|nuORF	ENST00000477275.1_1_10:133959024-133981894:+|nuORF	ENST00000477275.1_1_10:133959024-133981894:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7693176269531	2	470.769783	939.525013	-0.039118	-1.8416E-05	-1.6086	-0.0007573	-1.6478	-0.00077572	470.76888428229023	53.107	1.8265	53.104	52.614	54.44	-0.0033035					119	53	3	0	0	0	0.69624	1	4739	4739		40.778	0	1	1606400			47584	12355	32016	32029	53749	53749					0.052831252231385406
RGLLRDGPG	9	Unmodified	_RGLLRDGPG_					0	0	0		ENST00000477275.1_1_10:133959024-133981894:+|nuORF	ENST00000477275.1_1_10:133959024-133981894:+|nuORF	ENST00000477275.1_1_10:133959024-133981894:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7691345214844	2	470.769783	939.525013	-0.93673	-0.00044098	-0.76345	-0.00035941	-1.7002	-0.00080039	470.7692759714824	53.261	1.827	53.278	52.753	54.58	0.017487					126	54	3	0	0	0	0.58668	1	4710	4710		47.657	0	1	1396300			47585	12355	32016	32029	53750	53750					0.052831252231385406
RGLLRDGPG	9	Unmodified	_RGLLRDGPG_					0	0	0		ENST00000477275.1_1_10:133959024-133981894:+|nuORF	ENST00000477275.1_1_10:133959024-133981894:+|nuORF	ENST00000477275.1_1_10:133959024-133981894:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.768798828125	2	470.769783	939.525013	0.34379	0.00016185	-2.4863	-0.0011705	-2.1425	-0.0010086	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.71772	1	4265	4265		39.253	0	1	1863100			47586	12355	32016	32029	53751	53751					0.052831252231385406
RGLLRDGPG	9	Unmodified	_RGLLRDGPG_					0	0	0		ENST00000477275.1_1_10:133959024-133981894:+|nuORF	ENST00000477275.1_1_10:133959024-133981894:+|nuORF	ENST00000477275.1_1_10:133959024-133981894:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7696533203125	2	470.769783	939.525013	-0.26642	-0.00012542	-1.5501	-0.00072973	-1.8165	-0.00085516	470.76897416042203	52.548	1.7695	52.972	52.234	54.003	0.42348					108	42	4	0	0	0	0.6204	1	5236	5236		45.972	0	1	18288000			47587	12355	32016	32029	53752	53752					0.052831252231385406
RGLLRLKRPG	10	Unmodified	_RGLLRLKRPG_					0	0	0			REV__ENST00000575944.1_1_17:1519839-1531078:-|nuORF	REV__ENST00000575944.1_1_17:1519839-1531078:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.2593994140625	2	583.385648	1164.75674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.594	1	24.266	23.766	24.766	-0.32825								0	0	0	0.45132	1	1196	1196		15.642	4.1308	1		+		47588	28989	32017	32030	53753	53753					0.18095592644681346
RGLLWRLRDKQ	11	Unmodified	_RGLLWRLRDKQ_					0	0	0		ENSG00000167103|ENST00000388747|PIP5KL1;ENST00000492296.1_1_9:130690342-130693031:-|nuORF	ENSG00000167103|ENST00000388747|PIP5KL1	ENSG00000167103|ENST00000388747|PIP5KL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.9553527832031	3	480.956393	1439.84735	-0.47065	-0.00022636	-2.8191	-0.0013558	-3.2897	-0.0015822	480.95514697396237	19.05	0.47779	18.42	18.233	18.711	-0.6296					23	10	4	0	0	0	0.77205	1	467	467		17.167	0.63689	1	204650			47589	6266	32018	32031	53754	53754					0.1450201690229278
RGLNIILISRN	11	Unmodified	_RGLNIILISRN_					0	0	0		nc|ENSG00000103160|Q3SXM5-2|HSDL1;ENSG00000103160|ENST00000219439|HSDL1	nc|ENSG00000103160|Q3SXM5-2|HSDL1	nc|ENSG00000103160|Q3SXM5-2|HSDL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8928833007812	2	634.893503	1267.77245	-0.13084	-8.307E-05	-1.4622	-0.00092832	-1.593	-0.0010114	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.61369	1	11445	11445		42.864	3.6114	1	40768000			47590	2058	32019	32032	53755	53755					0.14927834371087556
RGLNRPDI	8	Unmodified	_RGLNRPDI_					0	0	0			REV__ENSG00000036672|ENST00000260187|USP2	REV__ENSG00000036672|ENST00000260187|USP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76806640625	2	470.769783	939.525013	-0.26514	-0.00012482	-1.518	-0.00071462	-1.7831	-0.00083944	470.76915813148867	64.797	1.286	65.183	64.351	65.637	0.38615					55	30	2	0	0	0	0.90465	1	7016	7016		40.573	1.7665	1	115640	+		47591	16295	32020	32033	53756	53756					0.052831252231385406
RGLNTSILL	9	Unmodified	_RGLNTSILL_					0	0	0		ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-4|CLCN2;nc|ENSG00000114859|P51788-3|CLCN2;ENSG00000114859|ENST00000265593|CLCN2;nc|ENSG00000114859|P51788-5|CLCN2	ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-5|CLCN2	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7677307128906	2	493.803291	985.59203	-1.3126	-0.00064816	1.0185	0.00050293	-0.29412	-0.00014524	493.8037892806279	38.994	0.29869	39.549	39.36	39.658	0.55449					10	6	2	0	0	0	0.20789	1	3232	3232		24.203	0	1	115590			47592	12563;14856	32021	32034	53757	53757					0.09865735714254242
RGLNVDHK	8	Unmodified	_RGLNVDHK_					0	0	0			REV__ENSG00000174231|ENST00000304992|PRPF8	REV__ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.76202392578125	2	469.761958	937.509363	-1.0651	-0.00050035	-0.060913	-2.8615E-05	-1.126	-0.00052896	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.85277	1	1872	1872		25.45	0	1	219920	+		47593	21981	32022	32035	53758	53758					0.03810838706078812
RGLPAQQSA	9	Unmodified	_RGLPAQQSA_					0	0	0		ENST00000526183.5_1_8:145725999-145727283:+|nuORF	ENST00000526183.5_1_8:145725999-145727283:+|nuORF	ENST00000526183.5_1_8:145725999-145727283:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25372314453125	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.77244	1	8277	8277		32.812	3.6629	1	1482000			47594	13254	32023	32036	53759	53759					0.027191324691784757
RGLPGLKGH	9	Unmodified	_RGLPGLKGH_					0	0	0		ENSG00000164692|ENST00000297268|COL1A2;ENST00000478215.1_1_7:94054867-94055854:+|nuORF	ENSG00000164692|ENST00000297268|COL1A2	ENSG00000164692|ENST00000297268|COL1A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.7828674316406	2	467.782693	933.550834	-0.33029	-0.00015451	0.46133	0.0002158	0.13103	6.1295E-05	467.7826753915283	18.279	0.25961	18.203	18.069	18.329	-0.07671					13	7	2	0	0	0	0.78058	1	287	287		30.504	5.0535	1	79545			47595	5992	32024	32037	53760	53760					0.08140019465417936
RGLPLASAS	9	Unmodified	_RGLPLASAS_					0	0	0		ENST00000227525.7_1_11:60689754-60689967:+|nuORF	ENST00000227525.7_1_11:60689754-60689967:+|nuORF	ENST00000227525.7_1_11:60689754-60689967:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.2555847167969	2	436.253434	870.492316	2.1857	0.0009535	0.79812	0.00034818	2.9838	0.0013017	436.2535659232107	112.82	1.3997	112.85	112.71	114.11	0.028854					52	37	2	0	0	0	0.76255	1	12314	12314		35.618	0.41757	1	994690			47596	9200	32025	32038	53761	53761					0.051889181002820806
RGLPLRQGGVP	11	Unmodified	_RGLPLRQGGVP_					0	0	0		ENST00000378412.7_1_1:2527532-2528087:-|nuORF	ENST00000378412.7_1_1:2527532-2528087:-|nuORF	ENST00000378412.7_1_1:2527532-2528087:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.3460693359375	2	575.346189	1148.67783	0.94019	0.00054093	-1.3159	-0.0007571	-0.37572	-0.00021617	575.3454322863764	98.249	1.7248	98.634	98.18	99.904	0.38548					107	42	5	0	0	0	0.64498	1	11874	11874		39.253	7.298	1	3140900			47597	10864	32026	32039	53762	53762					0.10943320619753649
RGLPSPASAPP	11	Unmodified	_RGLPSPASAPP_					0	0	0		ENST00000535572.5_1_12:862139-862463:+|nuORF	ENST00000535572.5_1_12:862139-862463:+|nuORF	ENST00000535572.5_1_12:862139-862463:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.826904296875	2	525.290548	1048.56654	-1.5327	-0.00080511	2.5009	0.0013137	0.96823	0.0005086	525.2914249332272	99.073	0.24474	99.259	99.074	99.319	0.18582					7	5	2	0	0	0	0.17527	1	10243	10243		47.96	5.5634	1	100310			47598	13426	32027	32040	53763	53763					0.044202611917853574
RGLQERRLVL	10	Unmodified	_RGLQERRLVL_					0	0	0		ENST00000418710.2_1_7:20824815-20825286:-|nuORF	ENST00000418710.2_1_7:20824815-20825286:-|nuORF	ENST00000418710.2_1_7:20824815-20825286:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8690795898438	2	620.385845	1238.75714	0.89344	0.00055428	0.68925	0.0004276	1.5827	0.00098188	621.3894828033013	97.501	2.0737	97.662	96.963	99.037	0.16073					81	47	3	0	0	0	0.37624	1	10030	10030		20.837	0	1	91867			47599	11428	32028	32041	53764	53764					0.1473096757388248
RGLQKDYRK	9	Unmodified	_RGLQKDYRK_					0	0	0		CON__Q0VCM5	CON__Q0VCM5	CON__Q0VCM5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3345947265625	2	582.335821	1162.65709	-0.42207	-0.00024579	0.66388	0.0003866	0.2418	0.00014081	582.3360730171839	20.278	0.90201	19.648	19.305	20.207	-0.6296					47	19	4	0	0	0	0.55097	1	617	617		49.442	1.5259	1	811170		+	47600	605	32029	32042	53765	53765					0.08226730240062352
RGLQKQLD	8	Unmodified	_RGLQKQLD_					0	0	0			REV__ENST00000461811.5_1_9:131770965-131772716:-|nuORF	REV__ENST00000461811.5_1_9:131770965-131772716:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774353027344	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.88601	1	8205	8205		34.173	0.65696	1	6441000	+		47601	20108	32030	32043	53766	53766					0.06031992020314192
RGLQWLLP	8	Unmodified	_RGLQWLLP_					0	0	0			REV__ENST00000072869.8_1_7:140394627-140394756:+|nuORF	REV__ENST00000072869.8_1_7:140394627-140394756:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7955017089844	2	491.795269	981.575986	-1.7512	-0.00086123	2.5855	0.0012715	0.83426	0.00041029	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.80706	1	3910	3910		19.36	0	1	2627300	+		47602	24072	32031	32044	53767	53767					0.08446074267999393
RGLRAATVPAR	11	Unmodified	_RGLRAATVPAR_					0	0	0			REV__ENST00000356384.4_1_9:137332080-137332257:+|nuORF	REV__ENST00000356384.4_1_9:137332080-137332257:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	584.3569946289062	2	584.357088	1166.69962	0.73696	0.00043065	-2.5462	-0.0014879	-1.8092	-0.0010572	584.3556286390271	92.429	3.0487	92.654	91.107	94.155	0.22547					201	72	4	0	0	0	0.74763	1	9272	9272		22.58	0	1	730880	+		47603	25389	32032	32045	53768	53768					0.12294125368293862
RGLRAATVPAR	11	Unmodified	_RGLRAATVPAR_					0	0	0			REV__ENST00000356384.4_1_9:137332080-137332257:+|nuORF	REV__ENST00000356384.4_1_9:137332080-137332257:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	584.3565063476562	2	584.357088	1166.69962	0.8115	0.00047421	-2.7242	-0.0015919	-1.9127	-0.0011177	584.3555753434755	92.506	2.8121	92.665	91.311	94.123	0.15874					185	66	3	0	0	0	0.732	1	9352	9352		26.063	2.5407	1	722410	+		47604	25389	32032	32045	53769	53769					0.12294125368293862
RGLREVDL	8	Unmodified	_RGLREVDL_					0	0	0			REV__ENSG00000071246|ENST00000167106|VASH1	REV__ENSG00000071246|ENST00000167106|VASH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27764892578125	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.88601	1	9896	9896		34.173	0	1	5642300	+		47605	16625	32033	32046	53770	53770					0.06031992020314192
RGLRFERRRQR	11	Unmodified	_RGLRFERRRQR_					0	0	0		ENST00000382247.5_1_4:17812117-17812297:-|nuORF	ENST00000382247.5_1_4:17812117-17812297:-|nuORF	ENST00000382247.5_1_4:17812117-17812297:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	510.63348388671875	3	510.638057	1528.89234	-0.66076	-0.00033741	-4.2242	-0.002157	-4.885	-0.0024945	510.63450150479764	105.06	2.1188	105.06	104.28	106.4	0					172	50	6	0	0	0	0.78683	1	10764	10764		14.086	7.7651	1	638450			47606	10971	32034	32047	53771	53771					0.14905260488194472
RGLRGPSV	8	Unmodified	_RGLRGPSV_					0	0	0		ENST00000541178.1_1_12:34175516-34175777:+|nuORF	ENST00000541178.1_1_12:34175516-34175777:+|nuORF	ENST00000541178.1_1_12:34175516-34175777:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.2540588378906	2	421.253769	840.492984	-1.7494	-0.00073696	2.1586	0.00090931	0.40915	0.00017236	421.25452750849325	84.126	1.3912	84.264	83.786	85.177	0.13811					78	31	3	0	0	0	0.81897	1	8149	8149		20.947	1.587	1	553140			47607	13514	32035	32048	53772	53772					0.06635757539993392
RGLRQRPVRRR	11	Unmodified	_RGLRQRPVRRR_					0	0	0			REV__ENST00000373313.2_1_20:39317299-39317872:-|nuORF	REV__ENST00000373313.2_1_20:39317299-39317872:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.9749755859375	3	483.974781	1448.90251	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.5	1	16.548	16.048	17.048	0.047804								0	0	0	0.56276	1	158	158		9.6461	0	1		+		47608	25757	32036	32049	53773	53773					0.19601868213430862
RGLRSGRHRV	10	Unmodified	_RGLRSGRHRV_					0	0	0			REV__ENST00000468085.5_1_1:221875756-221910233:-|nuORF	REV__ENST00000468085.5_1_1:221875756-221910233:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.3598022460938	2	597.357954	1192.70135	-0.45682	-0.00027289	0.96663	0.00057742	0.50981	0.00030454	597.3582006630761	100.19	3.2446	100.23	98.977	102.22	0.046349					174	76	4	0	0	0	0.86698	1	10831	10831		28.081	2.5074	1	4145900	+		47609	27174	32037	32050	53774	53774					0.11271179176924306
RGLRVPGT	8	Unmodified	_RGLRVPGT_					0	0	0		ENST00000293379.8_1_12:54813056-54813194:-|nuORF	ENST00000293379.8_1_12:54813056-54813194:-|nuORF	ENST00000293379.8_1_12:54813056-54813194:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2616271972656	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.89494	1	9375	9375		37.159	0	1	52688000			47610	9695	32038	32051	53775	53775					0.07556044057048439
RGLRYYYRR	9	Unmodified	_RGLRYYYRR_					0	0	0		ENSG00000105672|ENST00000402764|ETV2;nc|ENSG00000105672|O00321-2|ETV2	ENSG00000105672|ENST00000402764|ETV2	ENSG00000105672|ENST00000402764|ETV2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.24237060546875	3	434.910784	1301.71052	0.36005	0.00015659	-4.0464	-0.0017598	-3.6864	-0.0016032	434.90894034764267	16.777	0.22573	16.289	16.143	16.369	-0.48718					6	4	2	0	0	0	0.20789	1	176	176		13.454	0	1	53612			47611	2239	32039	32052	53776	53776					0.07173527742565966
RGLRYYYRR	9	Unmodified	_RGLRYYYRR_					0	0	0		ENSG00000105672|ENST00000402764|ETV2;nc|ENSG00000105672|O00321-2|ETV2	ENSG00000105672|ENST00000402764|ETV2	ENSG00000105672|ENST00000402764|ETV2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	434.910784	1301.71052	0.60289	0.0002622	-4.8801	-0.0021224	-4.2772	-0.0018602	434.9085051400577	16.776	0.38353	16.165	16.003	16.386	-0.6107	-0.062245	-0.00059954	NaN	13.454	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61773			47612	2239	32039	32052							0.07173527742565966
RGLSAPLSV	9	Unmodified	_RGLSAPLSV_					0	0	0			REV__ENSG00000121058|ENST00000240316|COIL	REV__ENSG00000121058|ENST00000240316|COIL	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27203369140625	2	450.269084	898.523616	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.78	1	109.75	109.25	110.25	-0.027641								0	0	0	0.30778	1	12151	12151		27.882	5.9224	1		+		47613	18444	32040	32053	53777	53777					0.07029491134369437
RGLSKNLSN	9	Unmodified	_RGLSKNLSN_					0	0	0		nc|ENSG00000127507|Q9UHX3-5|ADGRE2;nc|ENSG00000127507|Q9UHX3-4|ADGRE2;nc|ENSG00000127507|Q9UHX3-6|ADGRE2;nc|ENSG00000127507|Q9UHX3-3|ADGRE2;nc|ENSG00000127507|Q9UHX3-2|ADGRE2;ENSG00000127507|ENST00000315576|ADGRE2;ENST00000360222.8_1_19:14857708-14876689:-|nuORF	nc|ENSG00000127507|Q9UHX3-5|ADGRE2	nc|ENSG00000127507|Q9UHX3-5|ADGRE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7800598144531	2	494.780348	987.546142	0.77018	0.00038107	-1.1499	-0.00056896	-0.37974	-0.00018789	494.77966004867045	84.042	2.7013	83.973	82.365	85.067	-0.069313					89	62	2	0	0	0	0.76764	1	8594	8594		34.173	0.65696	1	283830			47614	3501	32041	32054	53778	53778					0.05187090532001548
RGLTGSLGLTG	11	Unmodified	_RGLTGSLGLTG_					0	0	0			REV__nc|ENSG00000120685|Q86XN7-2|PROSER1	REV__nc|ENSG00000120685|Q86XN7-2|PROSER1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3136596679688	2	516.29583	1030.57711	0.80876	0.00041756	-3.4349	-0.0017734	-2.6261	-0.0013559	516.2946928888624	99.723	0.30535	99.874	99.679	99.984	0.15073					8	6	2	0	0	0	0.17442	1	10399	10399		45.022	5.7694	1	112330	+		47615	18420	32042	32055	53779	53779					0.06304243846216195
RGLTHLCI	8	Unmodified	_RGLTHLCI_					0	0	0		ENST00000510740.1_1_5:36668711-36725248:-|nuORF	ENST00000510740.1_1_5:36668711-36725248:-|nuORF	ENST00000510740.1_1_5:36668711-36725248:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30133056640625	2	456.75783	911.501106	1.1766	0.00053744	4.407	0.0020129	5.5837	0.0025504	456.75965380149466	34.763	0.39994	35.144	34.811	35.211	0.3812					13	9	2	0	0	0	0.4196	1	2583	2583		30.504	5.9844	1	133080			47616	13009	32043	32056	53780	53780					0.041815684650941876
RGLTITAQHLK	11	Unmodified	_RGLTITAQHLK_					0	0	0			REV__ENST00000590252.2_1_19:1508603-1508663:+|nuORF	REV__ENST00000590252.2_1_19:1508603-1508663:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.3720703125	2	619.372404	1236.73025	-0.31167	-0.00019304	0.67406	0.0004175	0.36239	0.00022446	619.3734435178485	101.78	1.7281	101.8	101.4	103.13	0.01989					94	41	4	0	0	0	0.75164	1	10880	10880		21.686	0.8486	1	3076000	+		47617	29177	32044	32057	53781	53781					0.12135858962665225
RGLTITAQHLK	11	Unmodified	_RGLTITAQHLK_					0	0	0			REV__ENST00000590252.2_1_19:1508603-1508663:+|nuORF	REV__ENST00000590252.2_1_19:1508603-1508663:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.37158203125	2	619.372404	1236.73025	2.9405	0.0018212	-2.9614	-0.0018342	-0.020906	-1.2949E-05	619.3710459342678	101.7	2.0362	101.65	101.12	103.16	-0.049828					124	48	5	0	0	0	0.66009	2	11091	11091;11115		37.508	11.445	1	3045300	+		47618	29177	32044	32057	53782;53783	53782					0.12135858962665225
RGLVGSRP	8	Unmodified	_RGLVGSRP_					0	0	0		ENSG00000117983|ENST00000529681|MUC5B;ENST00000525715.5_1_11:1244314-1260349:+|nuORF	ENSG00000117983|ENST00000529681|MUC5B	ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.2543640136719	2	421.253769	840.492984	-1.2322	-0.00051907	1.6629	0.0007005	0.43068	0.00018143	421.25432904467385	84.477	1.3086	84.477	83.963	85.271	0					69	29	3	0	0	0	0.8621	1	8029	8029		26.693	1.2427	1	450410			47619	3006	32045	32058	53784	53784					0.06635757539982023
RGLVIAIK	8	Unmodified	_RGLVIAIK_					0	0	0			REV__ENST00000469042.5_1_3:132298334-132378619:-|nuORF	REV__ENST00000469042.5_1_3:132298334-132378619:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.30035400390625	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.86294	1	6669	6669		8.8223	0	1	1819800	+		47620	23810	32046	32059	53785	53785					0.14627262273347696
RGLVPHPLL	9	Unmodified	_RGLVPHPLL_					0	0	0			REV__ENSG00000123364|ENST00000243056|HOXC13	REV__ENSG00000123364|ENST00000243056|HOXC13	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.290283203125	2	501.316369	1000.61818	0.65542	0.00032857	-1.778	-0.00089135	-1.1226	-0.00056278	501.3147049778615	84.248	0.21524	84.396	84.215	84.431	0.14793					8	4	3	0	0	0	0.20789	1	8175	8175		11.511	2.8173	1	18962	+		47621	18539	32047	32060	53786	53786					0.11790049676358194
RGLVPVFVS	9	Unmodified	_RGLVPVFVS_					0	0	0		ENST00000558679.1_1_15:50546296-50557931:-|nuORF	ENST00000558679.1_1_15:50546296-50557931:-|nuORF	ENST00000558679.1_1_15:50546296-50557931:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.2922058105469	2	487.295102	972.575651	-1.6564	-0.00080713	-2.3009	-0.0011212	-3.9572	-0.0019283	487.29386636791077	90.875	2.2933	91.055	90.557	92.85	0.18029					120	54	3	0	0	0	0.78983	1	9127	9127		27.882	2.3082	1	1353600			47622	13793	32048	32061	53787	53787					0.08826654548136048
RGLVVIWD	8	Unmodified	_RGLVVIWD_					0	0	0		nc|ENSG00000073350|Q6P1M3-3|LLGL2;nc|ENSG00000073350|Q6P1M3-2|LLGL2;ENSG00000073350|ENST00000392550|LLGL2;ENST00000545227.6_1_17:73554011-73570984:+|nuORF	nc|ENSG00000073350|Q6P1M3-3|LLGL2	nc|ENSG00000073350|Q6P1M3-3|LLGL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27789306640625	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.884	1	8514	8514		33.516	1.5607	1	7438100			47623	1291	32049	32062	53788	53788					0.0643408151404401
RGLVVWKV	8	Unmodified	_RGLVVWKV_					0	0	0		ENST00000438284.2_1_3:11302203-11302380:+|nuORF	ENST00000438284.2_1_3:11302203-11302380:+|nuORF	ENST00000438284.2_1_3:11302203-11302380:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.80633544921875	2	478.805637	955.596721	0.48091	0.00023026	0.92951	0.00044505	1.4104	0.00067532	478.8059956307694	38.14	1.7088	38.481	37.399	39.107	0.34187					102	42	3	0	0	0	0.85277	1	3136	3136		25.45	3.4903	1	956570			47624	11749	32050	32063	53789	53789					0.11714664647661266
RGLWARRRVV	10	Unmodified	_RGLWARRRVV_					0	0	0			REV__ENST00000599937.5_1_19:50215848-50216859:+|nuORF	REV__ENST00000599937.5_1_19:50215848-50216859:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8931274414062	2	634.894172	1267.77379	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.64	1	107.68	107.18	108.18	0.035622								0	0	0	0.45132	1	11825	11825		26.693	1.1189	1		+		47625	29305	32051	32064	53790	53790					0.150615132504754
RGLWASSH	8	Unmodified	_RGLWASSH_					0	0	0			REV__chr1:101001587-101005941|30|17.03|0.15|6.78|-|1|TE_info:THE1C,THE1C_dup321,ERVL-MaLR,LTR,donor,+,101005941,101006247|DPH5,None|6	REV__chr1:101001587-101005941|30|17.03|0.15|6.78|-|1|TE_info:THE1C,THE1C_dup321,ERVL-MaLR,LTR,donor,+,101005941,101006247|DPH5,None|6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26373291015625	2	457.235576	912.456599	-0.13189	-6.0306E-05	-3.0886	-0.0014122	-3.2205	-0.0014725	457.2344004951889	79.345	0.14767	79.405	79.337	79.485	0.059357					5	3	2	0	0	0	0.4196	1	7736	7736		24.203	10.427	1	25671	+		47626	15404	32052	32065	53791	53791					-0.0031311935672420077
RGLWLAKP	8	Unmodified	_RGLWLAKP_					0	0	0		ENST00000420716.2_1_3:195591054-195595875:-|nuORF;nc|ENSG00000061938|Q07912|TNK2;nc|ENSG00000061938|Q07912-3|TNK2;ENSG00000061938|ENST00000672887|TNK2	ENST00000420716.2_1_3:195591054-195595875:-|nuORF	ENST00000420716.2_1_3:195591054-195595875:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7904968261719	2	470.789987	939.565421	-1.7868	-0.00084119	1.6107	0.00075828	-0.1761	-8.2908E-05	470.7906139736521	40.476	1.2312	40.476	39.584	40.815	0					64	34	2	0	0	0	0.85277	1	2596	2596		25.45	3.7478	1	120330			47627	1079	32053	32066	53792	53792					0.09322091613557859
RGMEIASIHLD	11	Unmodified	_RGMEIASIHLD_					0	0	0		ENST00000444519.5_1_19:9730197-9731842:-|nuORF;ENST00000457965.5_1_19:9730200-9731851:-|nuORF;ENST00000421525.5_3_19:9730200-9731858:-|nuORF;ENST00000585964.1_1_19:9806866-9811207:-|nuORF	ENST00000444519.5_1_19:9730197-9731842:-|nuORF	ENST00000444519.5_1_19:9730197-9731842:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3185424804688	2	621.31898	1240.62341	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.96	1	120.04	119.54	120.54	0.087753								0	0	0	0.56276	1	12592	12592		13.454	0.64233	1				47628	11463	32054	32067	53793	53793					0.012719406860014715
RGMLGNNFPL	10	Unmodified	_RGMLGNNFPL_					0	0	0			REV__ENST00000495482.1_1_1:44386060-44395890:+|nuORF	REV__ENST00000495482.1_1_1:44386060-44395890:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	559.7945556640625	2	559.792401	1117.57025	0.11611	6.4997E-05	1.8722	0.0010481	1.9883	0.0011131	559.79331126822	32.279	0.43787	32.225	31.963	32.401	-0.05434					16	9	2	0	0	0	0.74274	1	1887	1887		42.396	4.5846	1	57513	+		47629	18695	32055	32068	53794	53794					0.016166076940180574
RGMPAAFMES	10	Unmodified	_RGMPAAFMES_					0	0	0			REV__nc|ENSG00000176170|Q9NYA1-2|SPHK1	REV__nc|ENSG00000176170|Q9NYA1-2|SPHK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.2152099609375	2	548.749344	1095.48414	-0.51946	-0.00028505	-0.27713	-0.00015207	-0.79659	-0.00043713	548.7489963303229	54.358	0.79435	54.942	54.626	55.421	0.58474					42	18	3	0	0	0	0.37624	1	5593	5593		40.778	0	1	862460	+		47630	30050	32056	32069	53795	53795					-0.0597872020300656
RGMPEASGPK	10	Unmodified	_RGMPEASGPK_					0	0	0		ENSG00000197077|ENST00000358431|KIAA1671	ENSG00000197077|ENST00000358431|KIAA1671	ENSG00000197077|ENST00000358431|KIAA1671	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.257568359375	2	515.260933	1028.50731	0.17955	9.2515E-05	-3.2537	-0.0016765	-3.0742	-0.001584	515.2590970344206	30.802	0.50757	30.792	30.585	31.093	-0.010656					23	12	2	0	0	0	0.86047	1	1637	1637		23.523	0.48021	1	53048			47631	8131	32057	32070	53796	53796					-0.005799580940447413
RGNECVQY	8	Unmodified	_RGNECVQY_					0	0	0		ENST00000474941.1_1_3:42633004-42635998:+|nuORF;ENSG00000008324|ENST00000011691|SS18L2	ENST00000474941.1_1_3:42633004-42635998:+|nuORF	ENST00000474941.1_1_3:42633004-42635998:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7183837890625	2	484.716359	967.418164	1.0671	0.00051723	2.8185	0.0013662	3.8855	0.0018834	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.9283	1	11613	11613		49.442	5.0644	1	7522200			47632	744	32058	32071	53797	53797					-0.06684793053545945
RGNLAVNA	8	Unmodified	_RGNLAVNA_					0	0	0		ENSG00000161798|ENST00000293599|AQP5	ENSG00000161798|ENST00000293599|AQP5	ENSG00000161798|ENST00000293599|AQP5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78515625	2	407.730126	813.4457	-0.053194	-2.1689E-05	4.3638	0.0017793	4.3106	0.0017576	407.73156789287026	35.388	0.20324	35.333	35.191	35.394	-0.055149					8	6	2	0	0	0	0.4196	1	1855	1855		7.1934	0.45781	1	47576			47633	5655	32059	32072	53798	53798					0.03151478268989649
RGNPRSLN	8	Unmodified	_RGNPRSLN_					0	0	0		ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.25250244140625	2	457.251757	912.488962	-1.0616	-0.00048543	4.4416	0.0020309	3.3799	0.0015455	457.25362094838925	31.811	1.3336	31.937	31.344	32.677	0.12643					58	30	4	0	0	0	0.93786	1	2191	2191		53.351	10.955	1	534050			47634	10599	32060	32073	53799	53799					0.029216680462809563
RGNPRSLN	8	Unmodified	_RGNPRSLN_					0	0	0		ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	457.251757	912.488962	-1.9825	-0.00090651	5.2293	0.0023911	3.2468	0.0014846	457.254052832472	31.851	0.76632	31.851	31.469	32.235	0	0.070423	0.0012996	NaN	53.351	40	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104390			47635	10599	32060	32073							0.029216680462809563
RGNPRSLN	8	Unmodified	_RGNPRSLN_					0	0	0		ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	457.251757	912.488962	0.12275	5.6128E-05	3.0743	0.0014057	3.1971	0.0014619	457.25296997474567	31.82	0.71788	31.831	31.33	32.048	0.0109	0.050096	-0.00067117	NaN	53.351	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48133			47636	10599	32060	32073							0.029216680462809563
RGNPRSLN	8	Unmodified	_RGNPRSLN_					0	0	0		ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	457.251757	912.488962	-0.27777	-0.00012701	3.5716	0.0016331	3.2938	0.0015061	457.25322752613084	31.841	1.2365	31.79	31.211	32.448	-0.051031	0.0095728	-0.00021638	NaN	53.351	51	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62351			47637	10599	32060	32073							0.029216680462809563
RGNPRSLN	8	Unmodified	_RGNPRSLN_					0	0	0		ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	457.251757	912.488962	0.050445	2.3066E-05	2.9483	0.0013481	2.9987	0.0013712	457.25291412150784	31.705	1.7447	31.699	31.23	32.975	-0.0061455	-0.081317	-0.0007864	NaN	53.351	51	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72716			47638	10599	32060	32073							0.029216680462809563
RGNPRSLN	8	Unmodified	_RGNPRSLN_					0	0	0		ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	457.251757	912.488962	-1.2573	-0.00057491	4.7828	0.0021869	3.5255	0.001612	457.25363542076036	31.79	0.90026	31.848	31.471	32.371	0.058315	0.067519	0.00089123	NaN	53.351	55	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77681			47639	10599	32060	32073							0.029216680462809563
RGNPRSLN	8	Unmodified	_RGNPRSLN_					0	0	0		ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	457.251757	912.488962	0.13694	6.2615E-05	3.2306	0.0014772	3.3675	0.0015398	457.25296450768326	31.525	0.5657	31.637	31.376	31.942	0.11198	-0.14399	-0.00052824	NaN	53.351	47	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106110			47640	10599	32060	32073							0.029216680462809563
RGNPRSLN	8	Unmodified	_RGNPRSLN_					0	0	0		ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	ENST00000368535.2_1_10:135193041-135204956:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	457.251757	912.488962	0.24869	0.00011371	3.1266	0.0014297	3.3753	0.0015434	457.2533420021874	31.665	0.64785	31.648	31.324	31.972	-0.017466	-0.13283	-0.00062332	NaN	53.351	42	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80198			47641	10599	32060	32073							0.029216680462809563
RGNRPLTV	8	Unmodified	_RGNRPLTV_					0	0	0			REV__nc|ENSG00000116871|Q3KQU3-2|MAP7D1	REV__nc|ENSG00000116871|Q3KQU3-2|MAP7D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.77264404296875	2	456.772326	911.530098	-1.7558	-0.00080201	2.154	0.00098388	0.39816	0.00018187	456.7729586253597	89.816	2.3334	89.992	88.581	90.914	0.1758					104	54	4	0	0	0	0.85277	1	8964	8964		25.45	2.4077	1	808890	+		47642	18230	32061	32074	53800	53800					0.07079429085740685
RGPAGAAGPIG	11	Unmodified	_RGPAGAAGPIG_					0	0	0		nc|ENSG00000130635|P20908-2|COL5A1;ENSG00000130635|ENST00000371817|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	nc|ENSG00000130635|P20908-2|COL5A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.2552490234375	2	462.256508	922.498464	-0.66018	-0.00030517	-1.031	-0.00047661	-1.6912	-0.00078178	462.25599733554526	52.52	1.5182	52.944	52.318	53.836	0.42348					74	36	3	0	0	0	0.61774	1	5218	5218		42.396	1.618	1	3176800			47643	3662	32062	32075	53801	53801					0.03411436331816731
RGPAGQCH	8	Unmodified	_RGPAGQCH_					0	0	0			REV__ENSG00000184221|ENST00000382348|OLIG1	REV__ENSG00000184221|ENST00000382348|OLIG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1938171386719	2	413.192854	824.371155	-0.094874	-3.9201E-05	1.5112	0.00062443	1.4163	0.00058522	413.1937900034763	84.315	3.1314	84.763	83.717	86.848	0.44736					207	76	5	0	0	0	0.884	3	9737	9737;9749;9787		35.201	5.3592	1	10183000	+		47644	22656	32063	32076	53802;53803;53804	53802					-0.04805607814034829
RGPCAALLLL	10	Unmodified	_RGPCAALLLL_					0	0	0		ENSG00000186827|ENST00000379236|TNFRSF4	ENSG00000186827|ENST00000379236|TNFRSF4	ENSG00000186827|ENST00000379236|TNFRSF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8096313476562	2	513.810062	1025.60557	0.35777	0.00018383	-2.489	-0.0012789	-2.1312	-0.001095	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.86589	1	3959	3959		29.15	3.6994	1	1443600			47645	7823	32064	32077	53805	53805					0.09379270221825209
RGPCAALLLL	10	Unmodified	_RGPCAALLLL_					0	0	0		ENSG00000186827|ENST00000379236|TNFRSF4	ENSG00000186827|ENST00000379236|TNFRSF4	ENSG00000186827|ENST00000379236|TNFRSF4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.81005859375	2	513.810062	1025.60557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.583	1	50.491	49.991	50.991	-0.091797								0	0	0	0.45132	1	3983	3983		24.203	3.2558	1				47646	7823	32064	32077	53806	53806					0.09379270221825209
RGPFGREP	8	Unmodified	_RGPFGREP_					0	0	0			REV__ENST00000552457.1_1_12:105724602-105761251:+|nuORF	REV__ENST00000552457.1_1_12:105724602-105761251:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2623291015625	2	458.243401	914.472249	-0.81437	-0.00037318	4.1474	0.0019005	3.333	0.0015273	458.24507919815557	80.683	0.74883	81.104	80.721	81.47	0.4215					27	17	2	0	0	0	0.4196	1	9233	9233		21.96	0	1	128740	+		47647	28626	32065	32078	53807	53807					0.011591671603241593
RGPGLVMN	8	Unmodified	_RGPGLVMN_					0	0	0			REV__ENSG00000111271|ENST00000313698|ACAD10	REV__ENSG00000111271|ENST00000313698|ACAD10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2277526855469	2	422.228905	842.443257	-0.18819	-7.946E-05	-2.6251	-0.0011084	-2.8133	-0.0011879	422.22774658617425	61.684	0.88657	61.675	61.564	62.45	-0.0094147					63	38	2	0	0	0	0.90465	1	5772	5772		40.573	8.6178	1	445730	+		47648	17858	32066	32079	53808	53808					0.015733065396716484
RGPHRLLVR	9	Unmodified	_RGPHRLLVR_					0	0	0			REV__ENST00000326153.9_1_X:224107-229437:-|nuORF	REV__ENST00000326153.9_1_X:224107-229437:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3502197265625	2	552.349066	1102.68358	-0.44202	-0.00024415	1.7976	0.00099291	1.3556	0.00074876	552.8512329099864	109.37	0.13609	109.37	109.31	109.45	0					9	6	2	0	0	0	0.7932	1	11364	11364		15.642	1.5047	1	1126500	+		47649	25074	32067	32080	53809	53809					0.13634463922062423
RGPIGFRGPP	10	Unmodified	_RGPIGFRGPP_					0	0	0		ENSG00000092758|ENST00000649368|COL9A3	ENSG00000092758|ENST00000649368|COL9A3	ENSG00000092758|ENST00000649368|COL9A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.3056640625	2	527.30125	1052.58795	2.9406	0.0015506	4.0934	0.0021585	7.034	0.003709	527.3038780211599	99.28	1.7966	99.226	98.69	100.49	-0.053741					98	41	3	0	0	0	0.77314	1	10750	10750		40.778	8.8233	1	1691500			47650	1702	32068	32081	53810	53810					0.06375691011180606
RGPIGPPGR	9	Unmodified	_RGPIGPPGR_					0	0	0		chr2:189066433-189079080|50|11.52|0.18|5.98|-|ENST00000618828|COL5A2,COL5A2;ENSG00000204262|ENST00000374866|COL5A2	REV__ENSG00000082293|ENST00000620364|COL19A1	REV__ENSG00000082293|ENST00000620364|COL19A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.76519775390625	2	453.767043	905.519533	-0.13114	-5.9507E-05	-2.4763	-0.0011237	-2.6075	-0.0011832	453.7659298914551	41.976	1.7233	41.931	41.177	42.9	-0.045471					104	47	4	0	0	0	0.74721	1	2840	2840		37.159	8.9048	1	768160	+		47651	16838	32069	32082	53811	53811					0.06299446431319211
RGPKILGQN	9	Unmodified	_RGPKILGQN_					0	0	0		ENST00000560197.5_1_15:39160624-39178953:-|nuORF	ENST00000560197.5_1_15:39160624-39178953:-|nuORF	ENST00000560197.5_1_15:39160624-39178953:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.797119140625	2	491.793258	981.571963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.827	1	64.951	64.451	65.451	0.12397								0	0	0	0.31828	1	5741	5741		24.203	4.206	1				47652	13816	32070	32083	53812	53812					0.08043984774269575
RGPKPKRGLGT	11	Unmodified	_RGPKPKRGLGT_					0	0	0			REV__ENST00000507678.5_1_4:177241184-177241601:+|nuORF	REV__ENST00000507678.5_1_4:177241184-177241601:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.8585205078125	2	583.859464	1165.70437	-0.80585	-0.00047051	-0.15748	-9.1945E-05	-0.96333	-0.00056245	583.8591949944405	98.804	2.4153	98.854	98.351	100.77	0.049828					137	55	4	0	0	0	0.70737	1	10491	10491		30.318	3.6248	1	1986800	+		47653	27911	32071	32084	53813	53813					0.1281500951106409
RGPLALASH	9	Unmodified	_RGPLALASH_					0	0	0			REV__ENST00000361722.7_1_17:45788113-45788221:+|nuORF	REV__ENST00000361722.7_1_17:45788113-45788221:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.26641845703125	2	461.266876	920.519199	0.10818	4.9901E-05	-2.1066	-0.00097169	-1.9984	-0.00092179	461.2656469961776	34.574	0.4902	34.784	34.563	35.053	0.21003					22	11	3	0	0	0	0.74721	1	2577	2577		37.159	0	1	523800	+		47654	25510	32072	32085	53814	53814					0.05576026711457871
RGPLALASH	9	Unmodified	_RGPLALASH_					0	0	0			REV__ENST00000361722.7_1_17:45788113-45788221:+|nuORF	REV__ENST00000361722.7_1_17:45788113-45788221:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	461.266876	920.519199	-0.096362	-4.4449E-05	-0.88195	-0.00040681	-0.97831	-0.00045126	461.26644963924093	34.984	0.23072	34.971	34.849	35.08	-0.012203	0.071637	0.00067321	NaN	37.159	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18711	+		47655	25510	32072	32085							0.05576026711457871
RGPLALASH	9	Unmodified	_RGPLALASH_					0	0	0			REV__ENST00000361722.7_1_17:45788113-45788221:+|nuORF	REV__ENST00000361722.7_1_17:45788113-45788221:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	461.266876	920.519199	-0.63213	-0.00029158	-0.93796	-0.00043265	-1.5701	-0.00072423	461.26651435900857	35.063	0.39444	35.007	34.81	35.205	-0.056385	0.10691	0.00062154	NaN	37.159	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29072	+		47656	25510	32072	32085							0.05576026711457871
RGPLALASH	9	Unmodified	_RGPLALASH_					0	0	0			REV__ENST00000361722.7_1_17:45788113-45788221:+|nuORF	REV__ENST00000361722.7_1_17:45788113-45788221:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	461.266876	920.519199	0.10818	4.9901E-05	-2.1066	-0.00097169	-1.9984	-0.00092179	461.2656469961776	34.574	0.4902	34.784	34.563	35.053	0.21003	-0.11584	-0.00045655	NaN	37.159	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	523800	+		47657	25510	32072	32085							0.05576026711457871
RGPLGGAFTL	10	Unmodified	_RGPLGGAFTL_					0	0	0			REV__ENST00000608763.1_1_13:114524697-114525165:-|nuORF	REV__ENST00000608763.1_1_13:114524697-114525165:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.781005859375	2	494.782359	987.550165	-0.60525	-0.00029947	-3.7112	-0.0018362	-4.3164	-0.0021357	494.7803656183054	83.829	2.2213	83.994	82.644	84.865	0.1651					103	51	3	0	0	0	0.86218	1	8049	8049		32.812	2.9709	1	285340	+		47658	29402	32073	32086	53815	53815					0.05589180025708629
RGPPPLARA	9	Unmodified	_RGPPPLARA_					0	0	0		nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000115266|O95996-3|APC2;ENSG00000115266|ENST00000590469|APC2	nc|ENSG00000115266|O95996-2|APC2	nc|ENSG00000115266|O95996-2|APC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7833557128906	2	467.782693	933.550834	-0.24777	-0.0001159	0.2353	0.00011007	-0.012468	-5.8325E-06	467.7826615983552	18.941	0.33667	18.312	18.107	18.444	-0.6296					14	7	3	0	0	0	0.67345	1	454	454		42.396	0.96952	1	80852			47659	2826	32074	32087	53816	53816					0.08140019465406567
RGPPPLARA	9	Unmodified	_RGPPPLARA_					0	0	0		nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000115266|O95996-3|APC2;ENSG00000115266|ENST00000590469|APC2	nc|ENSG00000115266|O95996-2|APC2	nc|ENSG00000115266|O95996-2|APC2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	467.782693	933.550834	0.0034097	1.595E-06	-0.029831	-1.3954E-05	-0.026421	-1.2359E-05	467.78253862288267	18.255	0.26925	18.176	18.048	18.317	-0.078941	-0.0061818	-0.00015117	NaN	42.396	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70850			47660	2826	32074	32087							0.08140019465406567
RGPPPLARA	9	Unmodified	_RGPPPLARA_					0	0	0		nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000115266|O95996-3|APC2;ENSG00000115266|ENST00000590469|APC2	nc|ENSG00000115266|O95996-2|APC2	nc|ENSG00000115266|O95996-2|APC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	467.782693	933.550834	-1.1215	-0.00052464	2.2781	0.0010657	1.1566	0.00054102	467.78312420741537	18.166	0.19283	18.21	18.064	18.257	0.044048	0.026932	0.0020081	NaN	42.396	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40892			47661	2826	32074	32087							0.08140019465406567
RGPPPLARA	9	Unmodified	_RGPPPLARA_					0	0	0		nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000115266|O95996-3|APC2;ENSG00000115266|ENST00000590469|APC2	nc|ENSG00000115266|O95996-2|APC2	nc|ENSG00000115266|O95996-2|APC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	467.782693	933.550834	0.66532	0.00031122	-0.12553	-5.8723E-05	0.53978	0.0002525	467.78237065828336	18.077	0.17473	18.053	17.984	18.158	-0.024033	-0.12983	-0.00024071	NaN	42.396	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90880			47662	2826	32074	32087							0.08140019465406567
RGPQGHQGP	9	Unmodified	_RGPQGHQGP_					0	0	0		ENSG00000164692|ENST00000297268|COL1A2	ENSG00000164692|ENST00000297268|COL1A2	ENSG00000164692|ENST00000297268|COL1A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.2335510253906	2	467.236107	932.457661	-1.3963	-0.0006524	-4.2677	-0.001994	-5.664	-0.0026464	467.23387854623877	68.403	0.92169	68.403	68.094	69.016	0					94	38	3	0	0	0	0.72402	1	6085	6085		38.806	1.647	1	339590			47663	5992	32075	32088	53817	53817					-0.011269049878137594
RGPRMSQNL	9	Unmodified	_RGPRMSQNL_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;nc|ENSG00000114841|Q9P2D7-6|DNAH1;ENST00000486752.5_1_3:52350520-52422757:+|nuORF;nc|ENSG00000114841|Q9P2D7-3|DNAH1;ENST00000497875.1_1_3:52356446-52387784:+|nuORF	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7847900390625	2	529.779825	1057.5451	0.065511	3.4706E-05	2.1997	0.0011653	2.2652	0.0012	529.7807903370734	52.522	1.485	53.136	52.584	54.069	0.61446					111	35	5	0	0	0	0.51592	1	5331	5331		51.193	14.034	1	6729200			47664	2792	32076	32089	53818	53818					0.01862552891429914
RGPRRREPPE	10	Unmodified	_RGPRRREPPE_					0	0	0			REV__ENSG00000226174|ENST00000451127|TEX22	REV__ENSG00000226174|ENST00000451127|TEX22	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2330322265625	3	417.233927	1248.67995	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.402	1	31.514	31.014	32.014	0.11198								0	0	0	0.45132	1	1437	1437		28.081	0.43757	1		+		47665	23744	32077	32090	53819	53819					0.06555749357539753
RGQRLPRLSAR	11	Unmodified	_RGQRLPRLSAR_					0	0	0		ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2677917480469	3	437.268971	1308.78508	-1.7045	-0.00074531	-0.76685	-0.00033532	-2.4713	-0.0010806	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.73647	1	4195	4195		25.068	5.4408	1	3449100			47666	9453	32078	32091	53820	53820					0.14304290553968713
RGQRLPRLSAR	11	Unmodified	_RGQRLPRLSAR_					0	0	0		ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2678527832031	3	437.268971	1308.78508	-0.040503	-1.7711E-05	-2.5098	-0.0010974	-2.5503	-0.0011151	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.72892	1	4263	4263		26.75	0.68632	1	2735300			47667	9453	32078	32091	53821	53821					0.14304290553968713
RGQRLPRLSAR	11	Unmodified	_RGQRLPRLSAR_					0	0	0		ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677307128906	3	437.268971	1308.78508	-0.071191	-3.113E-05	-2.4084	-0.0010531	-2.4796	-0.0010843	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.74002	1	4435	4435		24.276	0.04411	1	3270700			47668	9453	32078	32091	53822	53822					0.14304290553968713
RGQRLPRLSAR	11	Unmodified	_RGQRLPRLSAR_					0	0	0		ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26776123046875	3	437.268971	1308.78508	-0.73822	-0.0003228	-1.7923	-0.00078371	-2.5305	-0.0011065	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.74771	1	4554	4554		22.562	2.2466	1	3639500			47669	9453	32078	32091	53823	53823					0.14304290553968713
RGQRLPRLSAR	11	Unmodified	_RGQRLPRLSAR_					0	0	0		ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26788330078125	3	437.268971	1308.78508	1.1681	0.00051075	-3.7096	-0.0016221	-2.5416	-0.0011114	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.78351	1	4476	4476		14.779	1.2709	1	4130900			47670	9453	32078	32091	53824	53824					0.14304290553968713
RGQRLPRLSAR	11	Unmodified	_RGQRLPRLSAR_					0	0	0		ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2679748535156	3	437.268971	1308.78508	-1.5729	-0.00068777	-0.86313	-0.00037742	-2.436	-0.0010652	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.76384	1	4166	4166		18.966	1.1332	1	4358700			47671	9453	32078	32091	53825	53825					0.14304290553968713
RGQRLPRLSAR	11	Unmodified	_RGQRLPRLSAR_					0	0	0		ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2679138183594	3	437.268971	1308.78508	0.29718	0.00012995	-2.7709	-0.0012116	-2.4737	-0.0010817	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.74672	1	4168	4168		22.781	1.7491	1	4533800			47672	9453	32078	32091	53826	53826					0.14304290553968713
RGQRLPRLSAR	11	Unmodified	_RGQRLPRLSAR_					0	0	0		ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2679138183594	3	437.268971	1308.78508	-0.53561	-0.00023421	-1.9117	-0.00083594	-2.4473	-0.0010701	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.77803	1	4147	4147		15.921	0	1	4132000			47673	9453	32078	32091	53827	53827					0.14304290553968713
RGQRLPRLSAR	11	Unmodified	_RGQRLPRLSAR_					0	0	0		ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2678527832031	3	437.268971	1308.78508	-1.0895	-0.00047642	-1.5359	-0.00067161	-2.6255	-0.001148	437.2682076309449	48.376	1.4718	48.845	48.119	49.591	0.46941					123	36	4	0	0	0	0.75779	1	4698	4698		20.315	1.784	1	3096400			47674	9453	32078	32091	53828	53828					0.14304290553968713
RGQRLPRLSAR	11	Unmodified	_RGQRLPRLSAR_					0	0	0		ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	ENST00000263026.9_1_16:22217644-22236999:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26800537109375	3	437.268971	1308.78508	0.02954	1.2917E-05	-2.6658	-0.0011657	-2.6363	-0.0011528	437.26770833059527	48.1	1.3181	49.023	48.466	49.784	0.92315					115	32	4	0	0	0	0.74002	1	4671	4671		24.276	0.89802	1	3276900			47675	9453	32078	32091	53829	53829					0.14304290553968713
RGQSVLYLKVF	11	Unmodified	_RGQSVLYLKVF_					0	0	0			REV__ENSG00000188352|ENST00000338382|FOCAD	REV__ENSG00000188352|ENST00000338382|FOCAD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2568054199219	3	437.259079	1308.75541	-1.4866	-0.00065002	-2.4798	-0.0010843	-3.9663	-0.0017343	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.732	1	10389	10389		26.063	4.283	1	981430	+		47676	22998	32079	32092	53830	53830					0.11337913765237317
RGRAAAPL	8	Unmodified	_RGRAAAPL_					0	0	0			REV__ENST00000336431.9_1_20:33450700-33460640:-|nuORF	REV__ENST00000336431.9_1_20:33450700-33460640:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7475280761719	2	406.248486	810.48242	-0.18598	-7.5555E-05	0.75193	0.00030547	0.56595	0.00022992	406.2487203598378	111.64	0.79961	111.58	111.26	112.06	-0.059937					46	25	2	0	0	0	0.81548	1	12189	12189		20.482	0	1	69533	+		47677	25190	32080	32093	53831	53831					0.06959774885547176
RGRAAAPL	8	Unmodified	_RGRAAAPL_					0	0	0			REV__ENST00000336431.9_1_20:33450700-33460640:-|nuORF	REV__ENST00000336431.9_1_20:33450700-33460640:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24835205078125	2	406.248486	810.48242	1.1517	0.00046786	-0.91843	-0.00037311	0.23322	9.4746E-05	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.9159	1	9322	9322		44.531	2.0566	1	58759000	+		47678	25190	32080	32093	53832	53832					0.06959774885547176
RGRAAAPL	8	Unmodified	_RGRAAAPL_					0	0	0			REV__ENST00000336431.9_1_20:33450700-33460640:-|nuORF	REV__ENST00000336431.9_1_20:33450700-33460640:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7497253417969	2	406.248486	810.48242	3.144	0.0012772	-2.6463	-0.0010751	0.49768	0.00020218	406.2473237922933	114.03	1.1173	114.05	113.12	114.24	0.020027					74	50	2	0	0	0	0.86294	1	13737	13737		8.8223	0	1	65995	+		47679	25190	32080	32093	53833	53833					0.06959774885547176
RGRAAPLA	8	Unmodified	_RGRAAPLA_					0	0	0		ENST00000366600.7_1_1:235658098-235667703:-|nuORF;ENST00000329082.11_1_15:93587869-93588007:-|nuORF	ENST00000366600.7_1_1:235658098-235667703:-|nuORF	ENST00000366600.7_1_1:235658098-235667703:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24847412109375	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.81724	2	9035	9035;9131		14.664	0	1	56664000			47680	10513	32081	32094	53834;53835	53834					0.06959774885535808
RGRAAPLA	8	Unmodified	_RGRAAPLA_					0	0	0		ENST00000366600.7_1_1:235658098-235667703:-|nuORF;ENST00000329082.11_1_15:93587869-93588007:-|nuORF	ENST00000366600.7_1_1:235658098-235667703:-|nuORF	ENST00000366600.7_1_1:235658098-235667703:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24847412109375	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.81548	3	10327	10327;10387;10399		20.482	0	1	28266000			47681	10513	32081	32094	53836;53837;53838	53836					0.06959774885535808
RGRASPFSF	9	Unmodified	_RGRASPFSF_					0	0	0			REV__ENST00000541206.6_1_16:88769648-88769795:-|nuORF	REV__ENST00000541206.6_1_16:88769648-88769795:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.769287109375	2	512.769783	1023.52501	0.15603	8.0008E-05	-1.5593	-0.00079956	-1.4033	-0.00071955	512.7688154099643	38.505	0.9453	38.477	38.129	39.074	-0.027843					50	21	3	0	0	0	0.69624	1	2630	2630		40.778	0.20554	1	477320	+		47682	28477	32082	32095	53839	53839					0.014191252231285034
RGRATGKGFV	10	Unmodified	_RGRATGKGFV_					0	0	0		nc|ENSG00000121390|Q8WXF1-2|PSPC1;ENSG00000121390|ENST00000338910|PSPC1	nc|ENSG00000121390|Q8WXF1-2|PSPC1	nc|ENSG00000121390|Q8WXF1-2|PSPC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8265380859375	2	524.804157	1047.59376	1.2408	0.0006512	2.881	0.0015119	4.1218	0.0021631	524.806236916653	99.032	0.73698	99.08	98.81	99.547	0.048157					24	17	2	0	0	0	0.37624	1	10594	10594		56.721	5.3856	1	258650			47683	3181	32083	32096	53840	53840					0.07186789522825165
RGRAVGVP	8	Unmodified	_RGRAVGVP_					0	0	0		ENST00000515110.1_1_5:122758190-122758966:-|nuORF;ENST00000306467.9_1_5:122754157-122758966:-|nuORF	ENST00000515110.1_1_5:122758190-122758966:-|nuORF	ENST00000515110.1_1_5:122758190-122758966:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24847412109375	2	406.248486	810.48242	-0.18704	-7.5983E-05	0.46265	0.00018795	0.27561	0.00011197	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.86288	1	9070	9070		26.796	0	1	50007000			47684	13074	32084	32097	53841	53841					0.06959774885558545
RGRDGGSFADT	11	Unmodified	_RGRDGGSFADT_					0	0	0		ENST00000393644.3_1_3:196255445-196255661:-|nuORF	ENST00000393644.3_1_3:196255445-196255661:-|nuORF	ENST00000393644.3_1_3:196255445-196255661:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.7667846679688	2	569.765426	1137.5163	0.51177	0.00029159	1.324	0.00075435	1.8357	0.0010459	569.7660224758696	60.966	0.45724	61.085	60.834	61.291	0.11901					44	20	3	0	0	0	0.70737	1	5298	5298		30.318	0	1	681140			47685	11051	32085	32098	53842	53842					-0.046958932039842693
RGRDPLLLR	9	Unmodified	_RGRDPLLLR_					0	0	0		ENST00000354883.10_1_3:66271363-66271495:+|nuORF	ENST00000354883.10_1_3:66271363-66271495:+|nuORF	ENST00000354883.10_1_3:66271363-66271495:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3387451171875	2	548.340907	1094.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.159	1	21.094	20.594	21.594	-0.064743								0	0	0	0.32159	1	593	593		23.042	2.5607	1				47686	10343	32086	32099	53843	53843					0.12371337965305429
RGRGIKGKG	9	Unmodified	_RGRGIKGKG_					0	0	0			REV__nc|ENSG00000270231|Q3BBV2|NBPF8	REV__nc|ENSG00000270231|Q3BBV2|NBPF8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7902526855469	2	464.793592	927.572632	-1.8726	-0.00087039	-4.4289	-0.0020585	-6.3015	-0.0029289	464.79142205700754	36.889	1.6787	36.889	35.761	37.439	0					76	39	3	0	0	0	0.7932	1	2160	2160		23.042	5.6775	1	196040	+		47687	30261	32087	32100	53844	53844					0.1059482421399025
RGRGKAFKIF	10	Unmodified	_RGRGKAFKIF_					0	0	0		ENST00000339094.5_1_15:85113353-85113692:-|nuORF	ENST00000339094.5_1_15:85113353-85113692:-|nuORF	ENST00000339094.5_1_15:85113353-85113692:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8612670898438	2	590.359099	1178.70365	0.037599	2.2197E-05	-3.1897	-0.0018831	-3.1521	-0.0018609	590.3568203632512	15.995	0.18199	15.508	15.389	15.571	-0.48718					5	3	2	0	0	0	0.37624	1	78	78		10.265	0	1	27005			47688	10214	32088	32101	53845	53845					0.12144214861996261
RGRGLRPIKG	10	Unmodified	_RGRGLRPIKG_					0	0	0		ENST00000440001.2_1_6:111805042-111805285:+|nuORF	ENST00000440001.2_1_6:111805042-111805285:+|nuORF	ENST00000440001.2_1_6:111805042-111805285:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.3530883789062	2	555.354348	1108.69414	1.3083	0.00072658	-3.2843	-0.0018239	-1.9759	-0.0010974	555.3524110053091	100.9	2.53	100.95	100.38	102.91	0.046356					182	60	5	0	0	0	0.85694	3	10813	10813;10895;10956		27.882	6.9353	1	5418400			47689	11768	32089	32102	53846;53847;53848	53846					0.14414446576483897
RGRGLRPIKG	10	Unmodified	_RGRGLRPIKG_					0	0	0		ENST00000440001.2_1_6:111805042-111805285:+|nuORF	ENST00000440001.2_1_6:111805042-111805285:+|nuORF	ENST00000440001.2_1_6:111805042-111805285:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3529663085938	2	555.354348	1108.69414	0.32258	0.00017915	-2.3709	-0.0013167	-2.0484	-0.0011376	555.3529219120848	100.81	3.7216	101.02	100.5	104.22	0.2058					223	91	5	0	0	0	0.85466	1	10592	10592		20.947	1.587	1	7708500			47690	11768	32089	32102	53849	53849					0.14414446576483897
RGRGLRPIKG	10	Unmodified	_RGRGLRPIKG_					0	0	0		ENST00000440001.2_1_6:111805042-111805285:+|nuORF	ENST00000440001.2_1_6:111805042-111805285:+|nuORF	ENST00000440001.2_1_6:111805042-111805285:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.3533325195312	2	555.354348	1108.69414	0.85673	0.00047579	-2.8194	-0.0015658	-1.9627	-0.00109	555.3526695275054	100.86	2.5278	101	100.46	102.99	0.14352					194	61	5	0	0	0	0.85438	5	10609	10511;10585;10609;10621;10679		34.173	8.7224	1	5097700			47691	11768	32089	32102	53850;53851;53852;53853;53854	53852					0.14414446576483897
RGRGLRPIKG	10	Unmodified	_RGRGLRPIKG_					0	0	0		ENST00000440001.2_1_6:111805042-111805285:+|nuORF	ENST00000440001.2_1_6:111805042-111805285:+|nuORF	ENST00000440001.2_1_6:111805042-111805285:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.353515625	2	555.354348	1108.69414	1.5834	0.00087937	-3.1167	-0.0017309	-1.5333	-0.00085153	555.3524993853406	100.59	1.0891	100.89	100.45	101.54	0.2999					67	28	3	0	0	0	0.8608	2	12164	12164;12187		34.173	9.9698	1	1093500			47692	11768	32089	32102	53855;53856	53855					0.14414446576483897
RGRGLRPIKG	10	Unmodified	_RGRGLRPIKG_					0	0	0		ENST00000440001.2_1_6:111805042-111805285:+|nuORF	ENST00000440001.2_1_6:111805042-111805285:+|nuORF	ENST00000440001.2_1_6:111805042-111805285:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.353759765625	2	555.354348	1108.69414	2.1967	0.00122	-3.5328	-0.001962	-1.3361	-0.00074201	555.3522704950425	100.68	0.92799	101.03	100.57	101.5	0.3459					69	22	4	0	0	0	0.71042	3	12241	12207;12229;12241		44.117	4.5949	1	1353700			47693	11768	32089	32102	53857;53858;53859	53859					0.14414446576483897
RGRGNLLLRV	10	Unmodified	_RGRGNLLLRV_					0	0	0			REV__ENST00000525451.6_2_11:65623690-65625691:-|nuORF	REV__ENST00000525451.6_2_11:65623690-65625691:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3670043945312	2	577.367456	1152.72036	0.64818	0.00037424	-2.4151	-0.0013944	-1.7669	-0.0010202	577.3659582171192	102.04	3.0704	102.23	101.84	104.91	0.19484					206	76	5	0	0	0	0.85466	1	10876	10876		20.947	1.587	1	17266000	+		47694	28184	32090	32103	53860	53860					0.15010715747962422
RGRGNLLLRV	10	Unmodified	_RGRGNLLLRV_					0	0	0			REV__ENST00000525451.6_2_11:65623690-65625691:-|nuORF	REV__ENST00000525451.6_2_11:65623690-65625691:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	577.3676147460938	2	577.367456	1152.72036	0.87834	0.00050713	-2.6389	-0.0015236	-1.7606	-0.0010165	577.3658132315567	102.16	3.1638	102.3	101.85	105.01	0.13522					236	78	5	0	0	0	0.86444	1	10904	10904		14.865	1.9057	1	15036000	+		47695	28184	32090	32103	53861	53861					0.15010715747962422
RGRHLATSRL	10	Unmodified	_RGRHLATSRL_					0	0	0			REV__ENST00000394586.6_1_14:65878636-66028150:+|nuORF	REV__ENST00000394586.6_1_14:65878636-66028150:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.3463134765625	2	583.846887	1165.67922	3.6826	0.0021501	-2.911	-0.0016996	0.7716	0.00045049	583.8448515127648	105.62	0.60435	105.81	105.52	106.12	0.18647					29	14	3	0	0	0	0.86106	1	12933	12933		33.922	4.7721	1	112560	+		47696	26086	32091	32104	53862	53862					0.10300954708486643
RGRHLATSRL	10	Unmodified	_RGRHLATSRL_					0	0	0			REV__ENST00000394586.6_1_14:65878636-66028150:+|nuORF	REV__ENST00000394586.6_1_14:65878636-66028150:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	583.846887	1165.67922	3.2092	0.0018737	-1.8009	-0.0010514	1.4083	0.00082225	583.8454261937402	105.9	0.43706	105.87	105.66	106.1	-0.03714	0.03664	-0.00041026	NaN	33.922	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127990	+		47697	26086	32091	32104							0.10300954708486643
RGRHLATSRL	10	Unmodified	_RGRHLATSRL_					0	0	0			REV__ENST00000394586.6_1_14:65878636-66028150:+|nuORF	REV__ENST00000394586.6_1_14:65878636-66028150:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	583.846887	1165.67922	0.0075521	4.4093E-06	2.6755	0.0015621	2.683	0.0015665	583.8479823443502	105.76	0.355	105.8	105.63	105.99	0.038322	-0.028638	0.0048167	NaN	33.922	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128430	+		47698	26086	32091	32104							0.10300954708486643
RGRHLATSRL	10	Unmodified	_RGRHLATSRL_					0	0	0			REV__ENST00000394586.6_1_14:65878636-66028150:+|nuORF	REV__ENST00000394586.6_1_14:65878636-66028150:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	583.846887	1165.67922	3.6826	0.0021501	-2.911	-0.0016996	0.7716	0.00045049	583.8448515127648	105.62	0.60435	105.81	105.52	106.12	0.18647	-0.024241	-0.0017066	NaN	33.922	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112560	+		47699	26086	32091	32104							0.10300954708486643
RGRHPRVP	8	Unmodified	_RGRHPRVP_					0	0	0		ENST00000330503.11_1_5:176939806-176940036:-|nuORF	ENST00000330503.11_1_5:176939806-176940036:-|nuORF	ENST00000330503.11_1_5:176939806-176940036:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.790771484375	2	487.791384	973.568215	-1.3135	-0.00064074	-0.26427	-0.00012891	-1.5778	-0.00076965	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.884	1	8658	8658		33.516	0	1	2239000			47700	10112	32092	32105	53863	53863					0.0803735979106932
RGRHQKKIRS	10	Unmodified	_RGRHQKKIRS_					0	0	0		ENST00000555815.5_1_15:25924490-25961922:-|nuORF;ENSG00000206190|ENST00000555815|ATP10A	ENST00000555815.5_1_15:25924490-25961922:-|nuORF	ENST00000555815.5_1_15:25924490-25961922:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.3866577148438	2	633.386711	1264.75887	-0.16034	-0.00010155	-2.0491	-0.0012979	-2.2095	-0.0013995	633.3853861154565	57.138	1.3537	57.109	56.711	58.065	-0.02866					59	39	2	0	0	0	0.85441	1	5284	5284		10.265	0	1	143780			47701	8555	32093	32106	53864	53864					0.13708021382490188
RGRICLRR	8	Unmodified	_RGRICLRR_					0	0	0		ENST00000327158.4_1_17:900609-902082:+|nuORF	ENST00000327158.4_1_17:900609-902082:+|nuORF	ENST00000327158.4_1_17:900609-902082:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3140869140625	2	515.314169	1028.61378	0.58613	0.00030204	3.6929	0.001903	4.279	0.002205	515.3156734656603	22.644	1.1835	22.034	21.745	22.928	-0.6107					52	28	3	0	0	0	0.87922	1	934	934		31.955	2.8053	1	271940			47702	10084	32094	32107	53865	53865					0.10062261981806842
RGRKGRLL	8	Unmodified	_RGRKGRLL_					0	0	0		ENST00000515867.1_1_3:126668128-126668617:+|nuORF	ENST00000515867.1_1_3:126668128-126668617:+|nuORF	ENST00000515867.1_1_3:126668128-126668617:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.31292724609375	2	478.317235	954.619916	-1.818	-0.00086957	-4.1885	-0.0020034	-6.0065	-0.002873	478.31510795693185	35.448	1.0031	35.448	35.005	36.008	0					44	26	2	0	0	0	0.81548	1	2007	2007		20.482	6.7065	1	76605			47703	13094	32095	32108	53866	53866					0.14079103484993993
RGRKKTPLKE	10	Unmodified	_RGRKKTPLKE_					0	0	0			REV__ENSG00000187475|ENST00000338379|H1-6	REV__ENSG00000187475|ENST00000338379|H1-6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.9228820800781	3	404.922689	1211.74624	0.44862	0.00018165	0.063043	2.5527E-05	0.51166	0.00020718	404.92260093832465	26.168	1.321	26.213	25.795	27.116	0.045507					105	39	4	0	0	0	0.84763	1	1090	1090		17.833	1.3033	1	304530	+		47704	22916	32096	32109	53867	53867					0.14883565199579607
RGRLLKGPKP	10	Unmodified	_RGRLLKGPKP_					0	0	0			REV__ENST00000388747.8_1_9:130692031-130693066:-|nuORF	REV__ENST00000388747.8_1_9:130692031-130693066:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.362060546875	2	561.366924	1120.7193	-1.2272	-0.00068889	-4.3413	-0.0024371	-5.5685	-0.003126	561.3643862619919	45.972	0.98896	45.972	45.502	46.491	0					58	25	3	0	0	0	0.85466	1	3427	3427		20.947	3.582	1	208060	+		47705	25988	32097	32110	53868	53868					0.1637650137906803
RGRLPISAS	9	Unmodified	_RGRLPISAS_					0	0	0		ENST00000525531.5_1_11:117070387-117070495:+|nuORF	ENST00000525531.5_1_11:117070387-117070495:+|nuORF	ENST00000525531.5_1_11:117070387-117070495:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.78546142578125	2	478.785433	955.556313	-1.6841	-0.00080631	1.9315	0.00092477	0.24743	0.00011846	478.78607821108346	92.142	1.9841	92.328	91.657	93.642	0.18582					105	46	4	0	0	0	0.67345	1	9247	9247		42.396	8.2236	1	673480			47706	13240	32098	32111	53869	53869					0.0767569825721921
RGRLPRHPLAV	11	Unmodified	_RGRLPRHPLAV_					0	0	0			REV__ENST00000579152.1_1_17:17398683-17399571:-|nuORF	REV__ENST00000579152.1_1_17:17398683-17399571:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	636.39892578125	2	636.394005	1270.77346	2.7247	0.001734	-0.68191	-0.00043397	2.0428	0.0013	636.3917086972409	101.64	1.2104	101.59	101.36	102.57	-0.049835					51	28	3	0	0	0	0.72228	1	11095	11095		27.882	2.3082	1	337560	+		47707	29030	32099	32112	53870	53870					0.1489009353063011
RGRPEFVAG	9	Unmodified	_RGRPEFVAG_					0	0	0			REV__ENST00000450917.1_1_2:3523256-3523661:+|nuORF	REV__ENST00000450917.1_1_2:3523256-3523661:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7677307128906	2	494.769783	987.525013	-1.0804	-0.00053455	-2.6501	-0.0013112	-3.7305	-0.0018457	494.76831235713274	38.716	0.71983	39.238	38.994	39.714	0.52235					52	16	4	0	0	0	0.76402	1	3232	3232		35.201	5.3592	1	759320	+		47708	26878	32100	32113	53871	53871					0.03075125223131181
RGRPLEKLLR	10	Unmodified	_RGRPLEKLLR_					0	0	0			REV__ENST00000585606.5_1_19:14590895-14591279:-|nuORF	REV__ENST00000585606.5_1_19:14590895-14591279:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26666259765625	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.029	1	47.067	46.567	47.567	0.038181								0	0	0	0.45132	1	3494	3494		25.126	9.7929	1		+		47709	18529	32101	32114	53872	53872					0.1689555795353499
RGRPPVPP	8	Unmodified	_RGRPPVPP_					0	0	0			REV__ENSG00000155629|ENST00000339364|PIK3AP1	REV__ENSG00000155629|ENST00000339364|PIK3AP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26336669921875	2	438.264136	874.51372	-1.9277	-0.00084486	0.24503	0.00010739	-1.6827	-0.00073747	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.86791	1	2247	2247		28.254	0	1	3507500	+		47710	20435	32102	32115	53873	53873					0.07144347919643224
RGRPRKALP	9	Unmodified	_RGRPRKALP_					0	0	0		ENST00000558085.6_1_22:17082945-17119521:+|nuORF;ENST00000591299.1_2_22:17082945-17094937:+|nuORF	ENST00000558085.6_1_22:17082945-17119521:+|nuORF	ENST00000558085.6_1_22:17082945-17119521:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3611450195312	2	525.835791	1049.65703	0.25468	0.00013392	-0.031595	-1.6614E-05	0.22308	0.0001173	525.8367114276828	37.209	0.10228	37.308	37.244	37.346	0.099277					4	2	2	0	0	0	0.20789	1	2113	2113		11.511	4.7755	1	23657			47711	13785	32103	32116	53874	53874					0.13418775030731922
RGRPVLGG	8	Unmodified	_RGRPVLGG_					0	0	0			REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2481689453125	2	406.248486	810.48242	-1.171	-0.0004757	1.5737	0.0006393	0.40272	0.0001636	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.81548	2	8488	8488;8752		26.796	5.0938	1	30016000	+		47712	24437	32104	32117	53875;53876	53875					0.06959774885569914
RGRPVLGG	8	Unmodified	_RGRPVLGG_					0	0	0			REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24835205078125	2	406.248486	810.48242	2.7178	0.0011041	-2.1477	-0.00087251	0.57008	0.0002316	406.24748869064086	111.72	0.8214	111.69	111.25	112.07	-0.025414					71	31	3	0	0	0	0.82419	2	12345	12345;12357		13.775	4.3048	1	80466	+		47713	24437	32104	32117	53877;53878	53877					0.06959774885569914
RGRPVLGG	8	Unmodified	_RGRPVLGG_					0	0	0			REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2471008300781	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.44	1	114.42	113.92	114.92	-0.024452								0	0	0	0.29353	1	12680	12680		28.254	1.4582	1		+		47714	24437	32104	32117	53879	53879					0.06959774885569914
RGRPVLGG	8	Unmodified	_RGRPVLGG_					0	0	0			REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24725341796875	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.78	1	118.76	118.26	119.26	-0.024208								0	0	0	0.30125	1	13162	13162		20.482	1.1219	1		+		47715	24437	32104	32117	53880	53880					0.06959774885569914
RGRPVLGG	8	Unmodified	_RGRPVLGG_					0	0	0			REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2491149902344	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.68	1	114.71	114.21	115.21	0.026466								0	0	0	0.30004	1	12561	12561		21.702	2.3424	1		+		47716	24437	32104	32117	53881	53881					0.06959774885569914
RGRPVLGG	8	Unmodified	_RGRPVLGG_					0	0	0			REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.24847412109375	2	406.248486	810.48242	-1.8141	-0.00073698	2.0083	0.00081588	0.1942	7.8892E-05	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.884	1	8849	8849		33.516	5.2613	1	42617000	+		47717	24437	32104	32117	53882	53882					0.06959774885569914
RGRPVLGG	8	Unmodified	_RGRPVLGG_					0	0	0			REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2483825683594	2	406.248486	810.48242	-1.8094	-0.00073505	2.5614	0.0010406	0.75204	0.00030551	406.2494235031066	90.628	2.0567	90.845	90.343	92.4	0.21736					110	49	3	0	0	0	0.86791	1	9110	9110		28.254	6.5519	1	1054100	+		47718	24437	32104	32117	53883	53883					0.06959774885569914
RGRPVLGG	8	Unmodified	_RGRPVLGG_					0	0	0			REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2484130859375	2	406.248486	810.48242	-1.9275	-0.00078306	2.6578	0.0010797	0.73023	0.00029665	406.2494715444893	90.638	1.8224	90.818	90.389	92.211	0.18029					100	43	3	0	0	0	0.86791	1	9037	9037		28.254	6.5519	1	761320	+		47719	24437	32104	32117	53884	53884					0.06959774885569914
RGRPVLGG	8	Unmodified	_RGRPVLGG_					0	0	0			REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2484130859375	2	406.248486	810.48242	3.144	0.0012772	-2.6463	-0.0010751	0.49768	0.00020218	406.2473237922933	114.03	1.1173	114.05	113.12	114.24	0.020027					74	50	2	0	0	0	0.9159	1	13712	13712		44.531	0	1	65995	+		47720	24437	32104	32117	53885	53885					0.06959774885569914
RGRPVLGG	8	Unmodified	_RGRPVLGG_					0	0	0			REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	REV__ENST00000262995.8_1_4:144257940-144258054:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2479248046875	2	406.248486	810.48242	-1.235	-0.0005017	1.527	0.00062034	0.29202	0.00011863	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.86288	1	10628	10628		26.796	6.3143	1	38125000	+		47721	24437	32104	32117	53886	53886					0.06959774885569914
RGRQPRLRNL	10	Unmodified	_RGRQPRLRNL_					0	0	0			REV__ENST00000553142.5_1_12:58021477-58021885:-|nuORF	REV__ENST00000553142.5_1_12:58021477-58021885:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.8896484375	2	633.386711	1264.75887	-0.76688	-0.00048573	-1.356	-0.0008589	-2.1229	-0.0013446	633.3857297307702	51.44	1.7579	51.44	50.814	52.572	0					77	46	2	0	0	0	0.86621	1	4122	4122		9.7057	0	1	76099	+		47722	28640	32105	32118	53887	53887					0.13708021382512925
RGRQPRLRNL	10	Unmodified	_RGRQPRLRNL_					0	0	0			REV__ENST00000553142.5_1_12:58021477-58021885:-|nuORF	REV__ENST00000553142.5_1_12:58021477-58021885:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.8831787109375	2	633.386711	1264.75887	-0.16034	-0.00010155	-2.0491	-0.0012979	-2.2095	-0.0013995	633.3853861154565	57.138	1.3537	57.109	56.711	58.065	-0.02866					59	39	2	0	0	0	0.86802	1	5277	5277		10.265	0	1	143780	+		47723	28640	32105	32118	53888	53888					0.13708021382512925
RGRQPRLRNL	10	Unmodified	_RGRQPRLRNL_					0	0	0			REV__ENST00000553142.5_1_12:58021477-58021885:-|nuORF	REV__ENST00000553142.5_1_12:58021477-58021885:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.885986328125	2	633.386711	1264.75887	0.12513	7.9253E-05	-2.7252	-0.0017261	-2.6001	-0.0016469	633.3847477666662	46.793	1.2244	47.716	47.519	48.744	0.92315					53	29	2	0	0	0	0.86225	1	4439	4439		20.947	0.95016	1	968610	+		47724	28640	32105	32118	53889	53889					0.13708021382512925
RGRQRRLRRVL	11	Unmodified	_RGRQRRLRRVL_					0	0	0			REV__ENSG00000111012|ENST00000228606|CYP27B1	REV__ENSG00000111012|ENST00000228606|CYP27B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.3176574707031	3	489.318548	1464.93381	-1.9765	-0.00096714	1.6179	0.00079166	-0.35864	-0.00017549	489.3194578450995	16.707	0.39843	16.707	16.493	16.892	0					35	17	3	0	0	0	0.88916	1	149	149		3.4087	0.19739	1	55555	+		47725	17844	32106	32119	53890	53890					0.21994441247511531
RGRQRRLRRVL	11	Unmodified	_RGRQRRLRRVL_					0	0	0			REV__ENSG00000111012|ENST00000228606|CYP27B1	REV__ENSG00000111012|ENST00000228606|CYP27B1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	488.9622802734375	3	489.318548	1464.93381	0.070995	3.4739E-05	-0.55841	-0.00027324	-0.48741	-0.0002385	489.3182650642184	16.441	0.40953	16.501	16.359	16.769	0.059267					51	17	4	0	0	0	0.18131	1	156	156		17.833	4.8757	1	1373000	+		47726	17844	32106	32119	53891	53891					0.21994441247511531
RGRQVPKAF	9	Unmodified	_RGRQVPKAF_					0	0	0			REV__ENSG00000139629|ENST00000356317|GALNT6	REV__ENSG00000139629|ENST00000356317|GALNT6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.813720703125	2	529.814525	1057.6145	0.82368	0.0004364	-2.1409	-0.0011343	-1.3172	-0.00069787	529.8132607725706	28.221	0.81391	28.198	27.978	28.792	-0.023558					38	18	3	0	0	0	0.74721	1	1353	1353		37.159	2.0071	1	203400	+		47727	19556	32107	32120	53892	53892					0.08799379902484361
RGRRHGRPII	10	Unmodified	_RGRRHGRPII_					0	0	0			REV__ENSG00000112996|ENST00000507110|MRPS30	REV__ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.587646484375	3	406.586523	1216.73774	-0.37107	-0.00015087	3.1758	0.0012912	2.8047	0.0011403	406.58772324462274	24.588	2.4069	24.542	24.117	26.524	-0.04598					132	57	4	0	0	0	0.85834	2	944	944;1005		35.152	7.0705	1	381610	+		47728	17974	32108	32121	53893;53894	53893					0.13804056073649917
RGRRRGHPLL	10	Unmodified	_RGRRRGHPLL_					0	0	0			REV__ENST00000367161.7_1_1:205156906-205180643:-|nuORF	REV__ENST00000367161.7_1_1:205156906-205180643:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.5876770019531	3	406.586523	1216.73774	0.5758	0.00023411	2.2333	0.00090804	2.8091	0.0011422	406.5873508642622	24.247	1.5285	24.302	23.869	25.398	0.055485					100	43	4	0	0	0	0.85981	1	863	863		35.152	0	1	404210	+		47729	25556	32109	32122	53895	53895					0.13804056073649917
RGRRRRHLRRL	11	Unmodified	_RGRRRRHLRRL_					0	0	0			REV__ENST00000379162.8_1_X:24483408-24483594:+|nuORF	REV__ENST00000379162.8_1_X:24483408-24483594:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.83306884765625	3	511.329558	1530.96685	0.092369	4.7231E-05	-2.9558	-0.0015114	-2.8634	-0.0014642	511.32675744719216	17.111	0.17152	17.174	17.068	17.24	0.062603					9	6	2	0	0	0	0.18258	1	225	225		8.7993	2.7983	1	71485	+		47730	25913	32110	32123	53896	53896					0.22260068090236018
RGRRRRHLRRL	11	Unmodified	_RGRRRRHLRRL_					0	0	0			REV__ENST00000379162.8_1_X:24483408-24483594:+|nuORF	REV__ENST00000379162.8_1_X:24483408-24483594:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	511.329558	1530.96685	-0.47796	-0.00024439	1.8213	0.0009313	1.3434	0.0006869	511.6651604843238	17.454	0.48981	17.5	17.17	17.66	0.0457	0.16292	0.001385	NaN	8.7993	30	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77831	+		47731	25913	32110	32123							0.22260068090236018
RGRRRRTKM	9	Unmodified	_RGRRRRTKM_					0	0	0			REV__ENST00000587309.5_1_17:43003545-43003737:-|nuORF	REV__ENST00000587309.5_1_17:43003545-43003737:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24847412109375	3	406.247513	1215.72071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.05	1	114.03	113.53	114.53	-0.024452								0	0	0	0.32292	1	12628	12628		22.58	1.7425	1		+		47732	29126	32111	32124	53897	53897					0.12147812196167251
RGRRRRTKM	9	Unmodified	_RGRRRRTKM_					0	0	0			REV__ENST00000587309.5_1_17:43003545-43003737:-|nuORF	REV__ENST00000587309.5_1_17:43003545-43003737:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.247802734375	3	406.247513	1215.72071	3.1409	0.001276	1.0897	0.00044271	4.2306	0.0017187	406.24731251758544	112.95	0.35545	112.98	112.85	113.21	0.030602					32	16	3	0	0	0	0.7932	1	13663	13663		16.717	1.8525	1	70867	+		47733	29126	32111	32124	53898	53898					0.12147812196167251
RGRRVPTDQKQ	11	Unmodified	_RGRRVPTDQKQ_					0	0	0			REV__nc|ENSG00000164663|Q70CQ1-2|USP49	REV__nc|ENSG00000164663|Q70CQ1-2|USP49	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7378234863281	3	447.588369	1339.74328	-1.6555	-0.00074097	-4.031	-0.0018042	-5.6864	-0.0025452	447.9210155346025	30.28	0.39804	30.309	30.052	30.45	0.028618					12	8	2	0	0	0	0.17648	1	1976	1976		11.455	0.86782	1	59844	+		47734	21102	32112	32125	53899	53899					0.08699690074786304
RGRRWGVLSGA	11	Unmodified	_RGRRWGVLSGA_					0	0	0			REV__ENST00000401950.6_1_22:30279275-30366973:+|nuORF	REV__ENST00000401950.6_1_22:30279275-30366973:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5641174316406	3	405.567017	1213.67922	-1.5858	-0.00064316	-4.1121	-0.0016677	-5.6979	-0.0023109	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.72892	1	5367	5367		26.75	3.2354	1	181560	+		47735	26258	32113	32126	53900	53900					0.08092954708513389
RGRSRRGRVF	10	Unmodified	_RGRSRRGRVF_					0	0	0			REV__ENST00000559750.5_1_15:77317886-77323646:+|nuORF	REV__ENST00000559750.5_1_15:77317886-77323646:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.8713989257812	2	623.871228	1245.7279	-0.065768	-4.1031E-05	-1.1891	-0.00074184	-1.2549	-0.00078287	623.8703810158217	104.89	2.4155	104.89	104.43	106.84	0					131	56	4	0	0	0	0.86587	1	10791	10791		29.17	7.2102	1	1348200	+		47736	28749	32114	32127	53901	53901					0.11486868068254807
RGRTIAPA	8	Unmodified	_RGRTIAPA_					0	0	0			REV__ENSG00000131773|ENST00000355849|KHDRBS3	REV__ENSG00000131773|ENST00000355849|KHDRBS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.2541809082031	2	421.253769	840.492984	-0.18708	-7.8807E-05	0.65223	0.00027475	0.46515	0.00019595	421.25387987106194	84.393	1.9611	84.46	83.811	85.772	0.067177					92	44	3	0	0	0	0.85277	1	8429	8429		25.45	1.2474	1	712040	+		47737	18964	32115	32128	53902	53902					0.06635757539970655
RGRWTLVRR	9	Unmodified	_RGRWTLVRR_					0	0	0			REV__ENST00000522060.1_1_8:144090549-144099792:-|nuORF	REV__ENST00000522060.1_1_8:144090549-144099792:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5802917480469	3	400.579257	1198.71594	3.4037	0.0013634	-0.1011	-4.05E-05	3.3026	0.0013229	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.7932	1	13671	13671		23.523	3.4922	1	5321000	+		47738	28052	32116	32129	53903	53903					0.1245325132506423
RGSAGRVP	8	Unmodified	_RGSAGRVP_					0	0	0			REV__ENSG00000173261|ENST00000311450|PLAC8L1	REV__ENSG00000173261|ENST00000311450|PLAC8L1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	400.228515625	2	400.230294	798.446034	-1.6649	-0.00066634	-2.1763	-0.00087101	-3.8412	-0.0015373	400.2294311369864	54.916	1.7424	54.916	53.961	55.703	0					80	56	2	0	0	0	0.86288	1	4661	4661		26.796	0	1	296370	+		47739	21909	32117	32130	53904	53904					0.03874897988839621
RGSAVRPTT	9	Unmodified	_RGSAVRPTT_					0	0	0			REV__ENST00000557554.5_1_14:74757154-74769615:-|nuORF	REV__ENST00000557554.5_1_14:74757154-74769615:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7670593261719	2	472.76724	943.519927	-1.568	-0.00074129	1.5546	0.00073498	-0.013349	-6.3108E-06	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.7932	1	8033	8033		26.693	2.4902	1	404330	+		47740	28720	32118	32131	53905	53905					0.045908213605116543
RGSDGQDH	8	Unmodified	_RGSDGQDH_					0	0	0		ENSG00000084731|ENST00000264712|KIF3C	ENSG00000084731|ENST00000264712|KIF3C	ENSG00000084731|ENST00000264712|KIF3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.18548583984375	2	436.18628	870.358007	1.7202	0.00075031	-1.7638	-0.00076933	-0.043586	-1.9012E-05	436.1854102685264	106.83	0.42462	106.94	106.7	107.13	0.10395					21	15	2	0	0	0	0.88944	1	13011	13011		57.811	9.8957	1	86010			47741	1524	32119	32132	53906	53906					-0.0823576739244345
RGSDGQDH	8	Unmodified	_RGSDGQDH_					0	0	0		ENSG00000084731|ENST00000264712|KIF3C	ENSG00000084731|ENST00000264712|KIF3C	ENSG00000084731|ENST00000264712|KIF3C	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	436.18628	870.358007	4.6619	0.0020334	-4.7579	-0.0020753	-0.096047	-4.1895E-05	436.18414027593576	106.8	0.35607	106.95	106.71	107.07	0.14929	0.0087492	-0.0010564	NaN	57.811	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96504			47742	1524	32119	32132							-0.0823576739244345
RGSEIKTPQ	9	Unmodified	_RGSEIKTPQ_					0	0	0			REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|98|3|sense	REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|98|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2798156738281	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.78124	1	8824	8824		30.318	2.0634	1	1814000	+		47743	29496	32120	32133	53907	53907					0.03911670812135526
RGSFERRVYI	10	Unmodified	_RGSFERRVYI_					0	0	0			REV__chr2:23939676-23958301|52|10.15|0.57|4.15|+|1|TE_info:MER92B,MER92B_dup60,ERV1,LTR,donor,-,23939242,23939676|None,UBXN2A|1	REV__chr2:23939676-23958301|52|10.15|0.57|4.15|+|1|TE_info:MER92B,MER92B_dup60,ERV1,LTR,donor,-,23939242,23939676|None,UBXN2A|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8609619140625	2	641.854378	1281.6942	7.1265	0.0045742	0.9889	0.00063473	8.1154	0.0052089	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.85251	2	13778	13778;13781		26.693	2.1737	1	98705	+		47744	15753	32121	32134	53908;53909	53908					0.0646240178584776
RGSFMGSDEV	10	Unmodified	_RGSFMGSDEV_					0	0	0		ENSG00000157227|ENST00000311852|MMP14	ENSG00000157227|ENST00000311852|MMP14	ENSG00000157227|ENST00000311852|MMP14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	542.7379760742188	2	542.740031	1083.46551	0.19272	0.00010459	-0.1323	-7.1805E-05	0.060415	3.279E-05	542.7398530998665	28.525	0.51326	28.637	28.336	28.849	0.11225					51	27	2	0	0	0	0.80179	1	1183	1183		39.253	4.0521	1	140290			47745	5418	32122	32135	53910	53910					-0.07288558573213777
RGSFVGNI	8	Unmodified	_RGSFVGNI_					0	0	0		nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2;ENSG00000081853|ENST00000394576|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.2344665527344	2	425.232502	848.450451	0.13377	5.6882E-05	1.8205	0.00077415	1.9543	0.00083103	425.2331653384869	34.208	0.69647	34.317	33.942	34.639	0.10829					61	30	3	0	0	0	0.88601	1	1727	1727		34.173	0	1	230230			47746	1472	32123	32136	53911	53911					0.020163624117685686
RGSFVRLKKY	10	Unmodified	_RGSFVRLKKY_					0	0	0			REV__ENSG00000165943|ENST00000298894|MOAP1	REV__ENSG00000165943|ENST00000298894|MOAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.38232421875	2	627.377489	1252.74043	6.5824	0.0041297	0.80567	0.00050546	7.3881	0.0046351	627.3778931643454	110.88	0.7373	110.93	110.56	111.3	0.049095					56	30	2	0	0	0	0.8651	1	13474	13474		25.574	1.3713	1	362180	+		47747	21236	32124	32137	53912	53912					0.1241646668793237
RGSGPFPCAH	10	Unmodified	_RGSGPFPCAH_					0	0	0		ENST00000035307.6_1_7:150930442-150930622:+|nuORF	ENST00000035307.6_1_7:150930442-150930622:+|nuORF	ENST00000035307.6_1_7:150930442-150930622:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8082885742188	2	514.740168	1027.46578	-0.3729	-0.00019195	2.6057	0.0013413	2.2328	0.0011493	514.7394649704216	50.144	0.51991	50.174	49.823	50.343	0.029629					21	13	2	0	0	0	0.37624	1	3936	3936		23.523	0	1	150030			47748	9070	32125	32138	53913	53913					-0.04685094062733697
RGSGPHDN	8	Unmodified	_RGSGPHDN_					0	0	0			REV__ENST00000319332.9_1_3:189674951-189675125:-|nuORF	REV__ENST00000319332.9_1_3:189674951-189675125:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.1908264160156	2	420.191365	838.368178	1.7374	0.00073004	-2.4837	-0.0010436	-0.7463	-0.00031359	420.1905572526673	93.928	4.8779	94.369	91.96	96.838	0.44099					240	120	3	0	0	0	0.91472	1	11109	11109		44.117	1.6423	1	4179400	+		47749	24986	32126	32139	53914	53914					-0.0574715966720305
RGSGPVRP	8	Unmodified	_RGSGPVRP_					0	0	0			REV__nc|ENSG00000141736|P04626-6|ERBB2	REV__nc|ENSG00000141736|P04626-6|ERBB2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2379455566406	2	413.238119	824.461684	-1.33	-0.0005496	2.1463	0.00088694	0.81635	0.00033735	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.86677	1	7209	7209		27.882	4.8398	1	895630	+		47750	29896	32127	32140	53915	53915					0.04243184505889985
RGSGPVRP	8	Unmodified	_RGSGPVRP_					0	0	0			REV__nc|ENSG00000141736|P04626-6|ERBB2	REV__nc|ENSG00000141736|P04626-6|ERBB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.23779296875	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.91472	1	7276	7276		44.117	3.5442	1	1341700	+		47751	29896	32127	32140	53916	53916					0.04243184505889985
RGSGRVTT	8	Unmodified	_RGSGRVTT_					0	0	0			REV__ENST00000352432.8_2_3:10369406-10369550:-|nuORF	REV__ENST00000352432.8_2_3:10369406-10369550:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2330627441406	2	417.233033	832.451513	-1.9007	-0.00079304	0.15977	6.6659E-05	-1.741	-0.00072638	417.23406411050627	32.902	0.70251	32.955	32.632	33.335	0.05246					59	32	3	0	0	0	0.79929	1	1560	1560		18.324	0	1	130350	+		47752	25346	32128	32141	53917	53917					0.028585767806475815
RGSLLRPT	8	Unmodified	_RGSLLRPT_					0	0	0		ENST00000294072.8_2_11:61116428-61116869:-|nuORF	ENST00000294072.8_2_11:61116428-61116869:-|nuORF	ENST00000294072.8_2_11:61116428-61116869:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2751770019531	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.90983	1	9443	9443		42.396	5.237	1	26247000			47753	9702	32129	32142	53918	53918					0.08152313228504227
RGSNLEQGIFG	11	Unmodified	_RGSNLEQGIFG_					0	0	0			REV__nc|ENSG00000172752|A8TX70-2|COL6A5	REV__nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3013916015625	2	589.301644	1176.58874	-0.24795	-0.00014612	0.094281	5.556E-05	-0.15367	-9.0557E-05	589.301562411532	110.39	1.2046	110.39	110.16	111.36	0					63	36	3	0	0	0	0.66929	1	11465	11465		36.447	2.2742	1	574490	+		47754	21854	32130	32143	53919	53919					0.007504408695467646
RGSPHKAS	8	Unmodified	_RGSPHKAS_					0	0	0		ENST00000461446.1_1_22:32914234-32925055:-|nuORF	ENST00000461446.1_1_22:32914234-32925055:-|nuORF	ENST00000461446.1_1_22:32914234-32925055:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2275390625	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.87922	1	7349	7349		31.955	2.8053	1	678130			47755	12024	32131	32144	53920	53920					0.015265941262214255
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7687683105469	2	470.769783	939.525013	-1.6346	-0.00076952	0.1281	6.0304E-05	-1.5065	-0.00070922	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.51592	1	4064	4064		51.193	3.5354	1	1359900			47756	4956	32132	32145	53921	53921					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7687683105469	2	470.769783	939.525013	-1.6002	-0.00075333	-0.071841	-3.3821E-05	-1.6721	-0.00078715	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.39367	1	4380	4380		58.23	7.0372	1	1490800			47757	4956	32132	32145	53922	53922					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7690734863281	2	470.769783	939.525013	-1.5754	-0.00074164	0.39518	0.00018604	-1.1802	-0.0005556	470.7698262584641	54.969	1.6886	54.969	54.144	55.833	0					124	54	3	0	0	0	0.51592	3	4631	4623;4631;4639		51.193	5.005	1	1398900			47758	4956	32132	32145	53923;53924;53925	53924					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7689208984375	2	470.769783	939.525013	-0.039118	-1.8416E-05	-1.6086	-0.0007573	-1.6478	-0.00077572	470.76888428229023	53.107	1.8265	53.104	52.614	54.44	-0.0033035					119	53	3	0	0	0	0.26953	3	4618	4618;4627;4653		67.494	12.717	1	1606400			47759	4956	32132	32145	53926;53927;53928	53926					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7692565917969	2	470.769783	939.525013	-0.061589	-2.8994E-05	-1.2536	-0.00059017	-1.3152	-0.00061916	470.7690565543328	55.059	1.681	55.051	54.414	56.095	-0.0077095					114	49	3	0	0	0	0.36616	3	4893	4863;4883;4893		60.118	4.6141	1	1601200			47760	4956	32132	32145	53929;53930;53931	53931					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7690124511719	2	470.769783	939.525013	-0.63239	-0.00029771	-1.0756	-0.00050635	-1.708	-0.00080406	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.39367	2	4727	4708;4727		58.23	12.258	1	1468500			47761	4956	32132	32145	53932;53933	53933					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7689514160156	2	470.769783	939.525013	-0.93673	-0.00044098	-0.76345	-0.00035941	-1.7002	-0.00080039	470.7692759714824	53.261	1.827	53.278	52.753	54.58	0.017487					126	54	3	0	0	0	0.39367	1	4681	4681		58.23	3.4536	1	1396300			47762	4956	32132	32145	53934	53934					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7690124511719	2	470.769783	939.525013	-1.0221	-0.00048115	-0.40497	-0.00019065	-1.427	-0.0006718	470.76946116999153	50.688	1.1627	50.718	50.343	51.506	0.029629					82	35	3	0	0	0	0.39367	3	3991	3983;3991;4012		58.23	15.574	1	1717600			47763	4956	32132	32145	53935;53936;53937	53936					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.768798828125	2	470.769783	939.525013	-1.0178	-0.00047915	-1.0022	-0.0004718	-2.02	-0.00095095	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.39367	2	4291	4291;4319		58.23	3.5297	1	1648400			47764	4956	32132	32145	53938;53939	53938					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7686462402344	2	470.769783	939.525013	0.34379	0.00016185	-2.4863	-0.0011705	-2.1425	-0.0010086	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.33718	1	4311	4311		62.107	12.083	1	1863100			47765	4956	32132	32145	53940	53940					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.76910400390625	2	470.769783	939.525013	0.35975	0.00016936	-1.6807	-0.00079124	-1.321	-0.00062187	470.76882384290565	54.831	1.8402	54.923	54.179	56.019	0.091167					116	54	3	0	0	0	0.39367	1	4550	4550		58.23	3.4536	1	2565300			47766	4956	32132	32145	53941	53941					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7687072753906	2	470.769783	939.525013	-0.46989	-0.00022121	-1.5944	-0.00075061	-2.0643	-0.00097182	470.768898093518	52.94	1.6168	52.866	52.471	54.088	-0.074509					101	42	3	0	0	0	0.36616	1	4286	4286		60.118	10.677	1	1875900			47767	4956	32132	32145	53942	53942					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7688903808594	2	470.769783	939.525013	-0.5306	-0.00024979	-0.82903	-0.00039028	-1.3596	-0.00064007	470.76924692266675	54.862	1.6397	54.812	54.113	55.753	-0.049274					122	51	3	0	0	0	0.36616	2	4568	4550;4568		60.118	5.3419	1	2604200			47768	4956	32132	32145	53943;53944	53944					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7689208984375	2	470.769783	939.525013	-0.63024	-0.0002967	-1.6901	-0.00079565	-2.3203	-0.0010924	470.76900608470595	48.857	1.2932	49.317	48.985	50.278	0.45983					73	31	4	0	0	0	0.66686	1	4751	4751		42.864	3.6114	1	21584000			47769	4956	32132	32145	53945	53945					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7690124511719	2	470.769783	939.525013	0.25998	0.00012239	-1.8077	-0.000851	-1.5477	-0.00072861	470.7687399956873	50.307	1.239	50.754	50.307	51.546	0.4476					93	29	5	0	0	0	0.54908	2	4937	4937;4997		49.536	7.0616	1	9098100			47770	4956	32132	32145	53946;53947	53946					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7691955566406	2	470.769783	939.525013	-0.26642	-0.00012542	-1.5501	-0.00072973	-1.8165	-0.00085516	470.76897416042203	52.548	1.7695	52.972	52.234	54.003	0.42348					108	42	4	0	0	0	0.39367	2	5248	5224;5248		58.23	1.981	1	18288000			47771	4956	32132	32145	53948;53949	53949					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7689208984375	2	470.769783	939.525013	-0.38204	-0.00017986	-1.0263	-0.00048316	-1.4084	-0.00066301	470.769153299195	81.635	1.0784	82.062	81.671	82.749	0.42646					51	26	2	0	0	0	0.44529	2	9412	9412;9424		54.722	3.3869	1	1307200			47772	4956	32132	32145	53950;53951	53950					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7691955566406	2	470.769783	939.525013	0.24256	0.00011419	-1.7466	-0.00082224	-1.504	-0.00070805	470.7687464868604	50.117	1.1073	50.962	50.641	51.748	0.84501					94	26	5	0	0	0	0.51592	3	4951	4939;4951;4987		51.193	2.1738	1	10800000			47773	4956	32132	32145	53952;53953;53954	53953					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7693176269531	2	470.769783	939.525013	0.2097	9.8719E-05	-1.7244	-0.0008118	-1.5147	-0.00071309	470.76868671211275	51.093	0.86503	51.845	51.491	52.356	0.75174					55	20	5	0	0	0	0.39367	1	5095	5095		58.23	17.452	1	3620900			47774	4956	32132	32145	53955	53955					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.76934814453125	2	470.769783	939.525013	-0.45506	-0.00021423	-1.2089	-0.00056911	-1.664	-0.00078334	470.7691067247387	52.317	1.9749	52.984	52.189	54.164	0.6673					112	47	4	0	0	0	0.18338	5	5226	5181;5214;5226;5250;5262		77.318	25.982	1	18701000			47775	4956	32132	32145	53956;53957;53958;53959;53960	53958					0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	470.769783	939.525013	-1.1264	-0.00053028	-0.32286	-0.00015199	-1.4493	-0.00068228	470.76946359217703	55.205	1.5206	55.232	54.59	56.111	0.027142	0.18195	0.00036268	NaN	60.118	94	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1443000			47776	4956	32132	32145							0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	470.769783	939.525013	-0.96569	-0.00045462	-1.0173	-0.00047891	-1.983	-0.00093353	470.76930027619693	81.681	0.76192	81.826	81.529	82.291	0.14513	-0.13012	3.8329E-05	NaN	54.722	31	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	145540			47777	4956	32132	32145							0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	470.769783	939.525013	0.60285	0.0002838	-2.4228	-0.0011406	-1.82	-0.00085679	470.7685343065905	81.756	0.78654	81.901	81.501	82.288	0.1455	-0.054973	-0.001285	NaN	54.722	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141650			47778	4956	32132	32145							0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	470.769783	939.525013	-1.4911	-0.00070195	-0.24951	-0.00011746	-1.7406	-0.00081941	470.7695156279439	81.748	0.7433	81.862	81.526	82.269	0.11426	-0.094136	0.00076124	NaN	54.722	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130650			47779	4956	32132	32145							0.05283125223127172
RGSPTPRIG	9	Unmodified	_RGSPTPRIG_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	470.769783	939.525013	-0.74559	-0.000351	-1.5421	-0.00072599	-2.2877	-0.001077	470.7692259582202	54.754	0.96549	55.322	54.984	55.95	0.56836	0.27211	-0.00078532	NaN	60.118	37	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272160			47780	4956	32132	32145							0.05283125223127172
RGSQCSLS	8	Unmodified	_RGSQCSLS_					0	0	0			REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.19952392578125	2	419.197802	836.381051	-1.891	-0.00079271	3.2039	0.0013431	1.3129	0.00055036	419.1989788685259	30.658	0.52602	30.721	30.572	31.098	0.063124					42	25	2	0	0	0	0.89962	1	1355	1355		38.806	3.6054	1	91142	+		47781	25137	32133	32146	53961	53961					-0.043684645993153026
RGSQCSLS	8	Unmodified	_RGSQCSLS_					0	0	0			REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	419.197802	836.381051	-2.0185	-0.00084614	3.5296	0.0014796	1.5112	0.00063348	419.19905999997303	30.695	0.42387	30.695	30.497	30.92	0	-0.058267	0.001435	NaN	38.806	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43869	+		47782	25137	32133	32146							-0.043684645993153026
RGSQCSLS	8	Unmodified	_RGSQCSLS_					0	0	0			REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	419.197802	836.381051	0.14249	5.9732E-05	1.3315	0.00055818	1.474	0.00061791	419.198044061194	30.621	0.44846	30.646	30.414	30.863	0.025011	-0.10714	-0.00040791	NaN	38.806	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43635	+		47783	25137	32133	32146							-0.043684645993153026
RGSQCSLS	8	Unmodified	_RGSQCSLS_					0	0	0			REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	419.197802	836.381051	-0.33657	-0.00014109	1.801	0.00075499	1.4645	0.00061391	419.19820218658055	30.689	0.67191	30.642	30.422	31.094	-0.047062	-0.11076	-1.4269E-05	NaN	38.806	37	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57146	+		47784	25137	32133	32146							-0.043684645993153026
RGSQCSLS	8	Unmodified	_RGSQCSLS_					0	0	0			REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	419.197802	836.381051	2.6005	0.0010901	-1.4019	-0.00058768	1.1986	0.00050244	419.1969106059714	30.712	0.5719	30.701	30.477	31.049	-0.010656	-0.052078	-0.0026996	NaN	38.806	34	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69532	+		47785	25137	32133	32146							-0.043684645993153026
RGSQCSLS	8	Unmodified	_RGSQCSLS_					0	0	0			REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	419.197802	836.381051	-1.891	-0.00079271	3.2039	0.0013431	1.3129	0.00055036	419.1989788685259	30.658	0.52602	30.721	30.572	31.098	0.063124	-0.032345	0.0011619	NaN	38.806	42	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91142	+		47786	25137	32133	32146							-0.043684645993153026
RGSQCSLS	8	Unmodified	_RGSQCSLS_					0	0	0			REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	419.197802	836.381051	-0.46576	-0.00019525	1.6806	0.00070452	1.2149	0.00050927	419.19838969392623	30.864	0.66292	30.944	30.678	31.341	0.079834	0.19096	-0.00011522	NaN	38.806	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	297970	+		47787	25137	32133	32146							-0.043684645993153026
RGSQCSLS	8	Unmodified	_RGSQCSLS_					0	0	0			REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	REV__ENST00000332231.9_2_11:1011318-1011438:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	419.197802	836.381051	0.27918	0.00011703	1.1046	0.00046303	1.3837	0.00058006	419.1980813504718	30.919	0.56387	30.923	30.667	31.23	0.0037212	0.16963	-0.0005982	NaN	38.806	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	313990	+		47788	25137	32133	32146							-0.043684645993153026
RGSRASGGKMT	11	Unmodified	_RGSRASGGKMT_					0	0	0		ENST00000400246.5_1_22:32150090-32150886:+|nuORF	ENST00000400246.5_1_22:32150090-32150886:+|nuORF	ENST00000400246.5_1_22:32150090-32150886:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.2886962890625	2	554.288014	1106.56147	-1.3781	-0.00076384	1.8934	0.0010495	0.51531	0.00028563	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.54689	1	2389	2389		48.602	4.4848	1	328550			47789	11223	32134	32147	53962	53962					0.012456340575454306
RGSRLGGP	8	Unmodified	_RGSRLGGP_					0	0	0			REV__ENST00000538079.1_1_12:6882155-6887174:+|nuORF	REV__ENST00000538079.1_1_12:6882155-6887174:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	400.2284240722656	2	400.230294	798.446034	-1.6649	-0.00066634	-2.1763	-0.00087101	-3.8412	-0.0015373	400.2294311369864	54.916	1.7424	54.916	53.961	55.703	0					80	56	2	0	0	0	0.86677	1	4619	4619		27.882	3.6795	1	296370	+		47790	28432	32135	32148	53963	53963					0.038748979888509893
RGSVADVLFI	10	Unmodified	_RGSVADVLFI_					0	0	0			REV__ENST00000474944.5_1_8:94767142-94822123:+|nuORF	REV__ENST00000474944.5_1_8:94767142-94822123:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.8068237304688	2	538.808574	1075.60259	-0.16838	-9.0727E-05	-3.2418	-0.0017467	-3.4102	-0.0018374	538.8067545662908	90.656	4.0484	90.725	89.127	93.176	0.069336					223	95	3	0	0	0	0.85934	1	9325	9325		35.618	2.1027	1	849020	+		47791	21134	32136	32149	53964	53964					0.06781718368642942
RGSVDLSVLN	10	Unmodified	_RGSVDLSVLN_					0	0	0			REV__ENSG00000162378|ENST00000294353|ZYG11B	REV__ENSG00000162378|ENST00000294353|ZYG11B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.29345703125	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.77314	1	9486	9486		40.778	1.5253	1	1864800	+		47792	20807	32137	32150	53965	53965					0.04507939983614051
RGSYWCSY	8	Carbamidomethyl (C)	_RGSYWC(Carbamidomethyl (C))SY_	RGSYWC(1)SY		RGSYWC(44)SY		0	1	0		ENST00000493784.1_1_3:111705786-111705882:+|nuORF	ENST00000493784.1_1_3:111705786-111705882:+|nuORF	ENST00000493784.1_1_3:111705786-111705882:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.7246704101562	2	539.724184	1077.43381	0.57792	0.00031192	1.6342	0.000882	2.2121	0.0011939	539.7249558516484	24.279	0.58073	24.335	24.088	24.669	0.055487					22	14	2	0	0	0	0.91472	1	889	889		44.117	6.3053	1	86496			47793	12739	32138	32151	53966	53966	166				-0.10180506536516987
RGTVSSRA	8	Unmodified	_RGTVSSRA_					0	0	0		ENST00000378090.8_1_12:104350891-104350945:-|nuORF	ENST00000378090.8_1_12:104350891-104350945:-|nuORF	ENST00000378090.8_1_12:104350891-104350945:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.7322998046875	2	417.233033	832.451513	0.06829	2.8493E-05	-2.241	-0.00093503	-2.1727	-0.00090654	417.2331943797063	32.781	0.56691	32.749	32.48	33.047	-0.032677					56	27	3	0	0	0	0.89494	1	1541	1541		37.159	0	1	104990			47794	10857	32139	32152	53967	53967					0.02858576780670319
RGVAAGVPL	9	Unmodified	_RGVAAGVPL_					0	0	0			REV__ENST00000460680.5_1_3:52443893-52444115:-|nuORF	REV__ENST00000460680.5_1_3:52443893-52444115:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.6772766113281	2	420.25852	838.502486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.107	1	69.07	68.57	69.57	-0.036957								0	0	0	0.28877	1	6687	6687		35.201	3.2459	1		+		47795	27013	32140	32153	53968	53968					0.07677525825499742
RGVAPRVN	8	Unmodified	_RGVAPRVN_					0	0	0		nc|ENSG00000144115|Q86YJ6-3|THNSL2;nc|ENSG00000144115|Q86YJ6-2|THNSL2;nc|ENSG00000144115|Q86YJ6-4|THNSL2;ENSG00000144115|ENST00000674334|THNSL2	nc|ENSG00000144115|Q86YJ6-3|THNSL2	nc|ENSG00000144115|Q86YJ6-3|THNSL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7607421875	2	434.759218	867.503883	-0.16642	-7.2351E-05	0.12333	5.3619E-05	-0.043085	-1.8732E-05	434.75945112998903	87.697	3.829	87.765	85.858	89.687	0.067711					171	89	4	0	0	0	0.87922	1	8851	8851		31.955	1.4512	1	1344400			47796	4688	32141	32154	53969	53969					0.06483159914273529
RGVAPRVN	8	Unmodified	_RGVAPRVN_					0	0	0		nc|ENSG00000144115|Q86YJ6-3|THNSL2;nc|ENSG00000144115|Q86YJ6-2|THNSL2;nc|ENSG00000144115|Q86YJ6-4|THNSL2;ENSG00000144115|ENST00000674334|THNSL2	nc|ENSG00000144115|Q86YJ6-3|THNSL2	nc|ENSG00000144115|Q86YJ6-3|THNSL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7603759765625	2	434.759218	867.503883	2.1234	0.00092316	-2.3923	-0.0010401	-0.26887	-0.00011689	434.758413846185	87.485	3.2565	87.538	86.101	89.357	0.053024					140	76	4	0	0	0	0.87064	1	8919	8919		29.15	2.3535	1	1543500			47797	4688	32141	32154	53970	53970					0.06483159914273529
RGVEVTKGK	9	Unmodified	_RGVEVTKGK_					0	0	0			REV__nc|ENSG00000103342|P15170|GSPT1	REV__nc|ENSG00000103342|P15170|GSPT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.2929992675781	2	487.293091	972.571629	-0.83121	-0.00040504	0.72567	0.00035361	-0.10554	-5.1428E-05	487.2933413180339	21.31	1.5119	21.355	20.763	22.275	0.045399					160	73	4	0	0	0	0.065196	1	582	582		101.6	0	1	2368300	+		47798	17406	32142	32155	53971	53971					0.08424565054428967
RGVHSGQLF	9	Unmodified	_RGVHSGQLF_					0	0	0			REV__chr14:41888537-41891250|20|15.0|0.41|5.21|+|2|TE_info:MARNA,MARNA_dup2564,TcMar-Mariner,DNA,donor,-,41888245,41888537|None,LRFN5|1	REV__chr14:41888537-41891250|20|15.0|0.41|5.21|+|2|TE_info:MARNA,MARNA_dup2564,TcMar-Mariner,DNA,donor,-,41888245,41888537|None,LRFN5|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.76806640625	2	500.769783	999.525013	-0.44921	-0.00022495	-3.2795	-0.0016423	-3.7288	-0.0018672	500.76806829817474	54.757	0.55186	54.731	54.427	54.978	-0.025955					28	17	2	0	0	0	0.55097	1	4938	4938		49.442	3.4896	1	186400	+		47799	15593	32143	32156	53972	53972					0.025231252231492363
RGVIWLWWLWW	11	Unmodified	_RGVIWLWWLWW_					0	0	0			REV__ENST00000361229.8_1_X:101976007-102003782:+|nuORF	REV__ENST00000361229.8_1_X:101976007-102003782:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.2902221679688	3	534.290713	1599.85031	0.32514	0.00017372	-2.1885	-0.0011693	-1.8634	-0.00099557	534.2895008039583	33.083	0.979	33.029	32.72	33.699	-0.05434					55	23	3	0	0	0	0.88916	1	1978	1978		3.4087	0.19739	1	281820	+		47800	25496	32144	32157	53973	53973					0.07437892027110138
RGVKKRLVLC	10	Unmodified	_RGVKKRLVLC_					0	0	0		ENSG00000197859|ENST00000651351|ADAMTSL2	ENSG00000197859|ENST00000651351|ADAMTSL2	ENSG00000197859|ENST00000651351|ADAMTSL2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	586.63134765625	2	586.376435	1170.73832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.878	1	75.01	74.51	75.51	0.13208								0	0	0	0.45132	1	6944	6944		16.473	2.336	1				47801	8207	32145	32158	53974	53974					0.1597771467847906
RGVKLSLSGG	10	Unmodified	_RGVKLSLSGG_					0	0	0		nc|ENSG00000008735|Q13387-2|MAPK8IP2;ENSG00000008735|ENST00000329492|MAPK8IP2;nc|ENSG00000008735|Q13387-3|MAPK8IP2;nc|ENSG00000008735|Q13387-4|MAPK8IP2	nc|ENSG00000008735|Q13387-2|MAPK8IP2	nc|ENSG00000008735|Q13387-2|MAPK8IP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.2926330566406	2	487.293091	972.571629	-0.95487	-0.0004653	1.1127	0.0005422	0.1578	7.6897E-05	487.2935206291715	91.355	2.0771	91.355	90.861	92.938	0					114	48	4	0	0	0	0.85981	1	8918	8918		35.152	6.0025	1	1437600			47802	750	32146	32159	53975	53975					0.08424565054440336
RGVKLSLSGG	10	Unmodified	_RGVKLSLSGG_					0	0	0		nc|ENSG00000008735|Q13387-2|MAPK8IP2;ENSG00000008735|ENST00000329492|MAPK8IP2;nc|ENSG00000008735|Q13387-3|MAPK8IP2;nc|ENSG00000008735|Q13387-4|MAPK8IP2	nc|ENSG00000008735|Q13387-2|MAPK8IP2	nc|ENSG00000008735|Q13387-2|MAPK8IP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.29302978515625	2	487.293091	972.571629	0.70329	0.00034271	-0.54514	-0.00026564	0.15815	7.7066E-05	487.2927254358079	90.914	2.8458	91.068	90.679	93.525	0.15388					125	68	3	0	0	0	0.73395	1	9141	9141		42.864	13.694	1	1558400			47803	750	32146	32159	53976	53976					0.08424565054440336
RGVLKTLPP	9	Unmodified	_RGVLKTLPP_					0	0	0		ENST00000546455.5_1_12:47473502-47610158:+|nuORF	ENST00000546455.5_1_12:47473502-47610158:+|nuORF	ENST00000546455.5_1_12:47473502-47610158:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.81494140625	2	490.816202	979.617851	-0.95094	-0.00046674	-0.52084	-0.00025564	-1.4718	-0.00072237	490.8158025749221	74.022	0.86785	74.411	74.042	74.91	0.38921					46	20	3	0	0	0	0.78983	1	8340	8340		27.882	4.8398	1	603920			47804	13590	32147	32160	53977	53977					0.127226299565109
RGVRSVTV	8	Unmodified	_RGVRSVTV_					0	0	0			REV__ENSG00000010319|ENST00000231721|SEMA3G	REV__ENSG00000010319|ENST00000231721|SEMA3G	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2677917480469	2	437.266876	872.519199	-0.37471	-0.00016385	-2.2126	-0.0009675	-2.5873	-0.0011313	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.8347	1	846	846		23.042	3.6825	1	970200	+		47805	16164	32148	32161	53978	53978					0.07784026711476599
RGWGAAVLH	9	Unmodified	_RGWGAAVLH_					0	0	0			REV__ENST00000254806.7_2_17:73841979-73842153:-|nuORF	REV__ENST00000254806.7_2_17:73841979-73842153:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.3004150390625	2	483.767043	965.519533	0.15536	7.5157E-05	0.38651	0.00018698	0.54186	0.00026214	483.76640044176094	32.442	0.21786	32.568	32.503	32.721	0.12643					5	4	2	0	0	0	0.20789	1	2263	2263		25.45	12.491	1	26047	+		47806	24312	32149	32162	53979	53979					0.03539446431318538
RGWLAKSLRL	10	Unmodified	_RGWLAKSLRL_					0	0	0			REV__ENST00000602101.6_1_19:15568751-15575169:-|nuORF	REV__ENST00000602101.6_1_19:15568751-15575169:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.58331298828125	3	400.583897	1198.72986	2.8195	0.0011294	-2.5476	-0.0010205	0.2719	0.00010892	400.58284711593865	24.711	0.82143	24.674	24.297	25.118	-0.037178					47	17	3	0	0	0	0.86225	1	932	932		32.751	3.1998	1	68143	+		47807	17506	32150	32163	53980	53980					0.13844484033506887
RGWRPGRK	8	Unmodified	_RGWRPGRK_					0	0	0		ENST00000389793.6_1_1:235993542-235993656:-|nuORF	ENST00000389793.6_1_1:235993542-235993656:-|nuORF	ENST00000389793.6_1_1:235993542-235993656:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8006591796875	2	506.799209	1011.58387	0.2762	0.00013998	2.9762	0.0015083	3.2524	0.0016483	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.84341	1	3595	3595		24.203	0.68005	1	416790			47808	10993	32151	32164	53981	53981					0.07853646308126372
RGYRIGRKWQR	11	Unmodified	_RGYRIGRKWQR_					0	0	0		ENST00000357156.6_1_20:33104228-33114094:+|nuORF	ENST00000357156.6_1_20:33104228-33114094:+|nuORF	ENST00000357156.6_1_20:33104228-33114094:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.29901123046875	3	492.620004	1474.83818	0.17487	8.6143E-05	-0.94188	-0.00046399	-0.76702	-0.00037785	492.6195863590965	16.408	0.2762	15.809	15.648	15.924	-0.59873					12	5	3	0	0	0	0.181	1	135	135		5.6988	2.6728	1	107950			47809	10382	32152	32165	53982	53982					0.11975668336617673
RHALRVLQN	9	Unmodified	_RHALRVLQN_					0	0	0			REV__ENSG00000166508|ENST00000303887|MCM7	REV__ENSG00000166508|ENST00000303887|MCM7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8309936523438	2	553.830706	1105.64686	-1.3791	-0.00076379	0.87112	0.00048245	-0.50797	-0.00028133	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.78536	1	10675	10675		29.15	3.6994	1	5911200	+		47810	21300	32153	32166	53983	53983					0.09826167305527633
RHAPSSKLV	9	Unmodified	_RHAPSSKLV_					0	0	0			REV__ENST00000414046.2_1_6:31430911-31431209:+|nuORF	REV__ENST00000414046.2_1_6:31430911-31431209:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7934875488281	2	497.793258	993.571963	0.11493	5.7209E-05	-0.38275	-0.00019053	-0.26783	-0.00013332	497.79284591894856	17.564	0.58294	16.953	16.613	17.196	-0.6107					25	13	3	0	0	0	0.58151	1	290	290		47.916	3.7988	1	179040	+		47811	26401	32154	32167	53984	53984					0.0749198477428763
RHDNNDWYE	9	Unmodified	_RHDNNDWYE_					0	0	0			REV__ENSG00000132825|ENST00000370996|PPP1R3D	REV__ENSG00000132825|ENST00000370996|PPP1R3D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.8376159667969	3	416.839131	1247.49556	-0.39394	-0.00016421	-2.8195	-0.0011753	-3.2134	-0.0013395	416.83788538428985	30.06	1.0565	30.089	29.748	30.805	0.028618					55	23	3	0	0	0	0.68711	1	1939	1939		41.427	0.34655	1	1292800	+		47812	19037	32155	32168	53985	53985					-0.11828483583644811
RHDNNDWYE	9	Unmodified	_RHDNNDWYE_					0	0	0			REV__ENSG00000132825|ENST00000370996|PPP1R3D	REV__ENSG00000132825|ENST00000370996|PPP1R3D	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	416.839131	1247.49556	-0.39394	-0.00016421	-2.8195	-0.0011753	-3.2134	-0.0013395	416.83788538428985	30.06	1.0565	30.089	29.748	30.805	0.028618	-0.025424	0.00044012	NaN	41.427	55	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1292800	+		47813	19037	32155	32168							-0.11828483583644811
RHFLIECTPK	10	Unmodified	_RHFLIECTPK_					0	0	0		nc|ENSG00000136205|Q68CZ2-2|TNS3;ENSG00000136205|ENST00000311160|TNS3	nc|ENSG00000136205|Q68CZ2-2|TNS3	nc|ENSG00000136205|Q68CZ2-2|TNS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3355712890625	2	622.334433	1242.65431	-0.27734	-0.0001726	3.3118	0.002061	3.0344	0.0018884	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.86763	1	12147	12147		26.693	2.1737	1	419280			47814	4096	32156	32169	53986	53986					0.04269138790891702
RHFLRMQQLAK	11	Unmodified	_RHFLRMQQLAK_					0	0	0		nc|ENSG00000126602|Q12931-2|TRAP1;ENSG00000126602|ENST00000246957|TRAP1	nc|ENSG00000126602|Q12931-2|TRAP1	nc|ENSG00000126602|Q12931-2|TRAP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.6233825683594	3	476.606595	1426.79796	0.77973	0.00037162	-0.86687	-0.00041316	-0.087141	-4.1532E-05	476.60464021388276	107.88	0.18073	107.96	107.79	107.98	0.084412					7	4	2	0	0	0	0.17648	1	11585	11585		21.032	16.389	1	1017300			47815	3458	32157	32170	53987	53987					0.10162985621855114
RHFQCLRKKNF	11	Unmodified	_RHFQCLRKKNF_					0	0	0			REV__ENST00000481952.1_1_10:124921781-124922345:+|nuORF	REV__ENST00000481952.1_1_10:124921781-124922345:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2637023925781	3	492.938345	1475.79321	-1.066	-0.00052549	-2.1848	-0.001077	-3.2509	-0.0016025	493.27177626696806	28.076	0.55338	27.979	27.707	28.261	-0.096947					27	12	3	0	0	0	0.18066	1	1692	1692		19.263	5.7547	1	99508	+		47816	20389	32158	32171	53988	53988					0.07434101479088895
RHFQCLRKKNF	11	Unmodified	_RHFQCLRKKNF_					0	0	0			REV__ENST00000481952.1_1_10:124921781-124922345:+|nuORF	REV__ENST00000481952.1_1_10:124921781-124922345:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	492.938345	1475.79321	0.84358	0.00041583	-4.4047	-0.0021712	-3.5611	-0.0017554	492.936138036846	28.189	0.53653	27.935	27.676	28.212	-0.25465	-0.022363	-0.0016528	NaN	19.263	32	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109410	+		47817	20389	32158	32171							0.07434101479088895
RHHEEQRQKEE	11	Unmodified	_RHHEEQRQKEE_					0	0	0		nc|ENSG00000080603|Q6ZRS2-3|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.5788269042969	3	502.57831	1504.7131	-1.2633	-0.00063491	-3.9567	-0.0019885	-5.22	-0.0026235	502.5763541881739	59.535	0.80822	59.926	59.525	60.333	0.39077					41	19	3	0	0	0	0.71394	1	6273	6273		29.245	1.6011	1	457910			47818	1447	32159	32172	53989	53989					-0.019067133810722225
RHHLKKVN	8	Unmodified	_RHHLKKVN_					0	0	0		nc|ENSG00000163576|Q8N7U6-3|EFHB;ENSG00000163576|ENST00000295824|EFHB;nc|ENSG00000163576|Q8N7U6-2|EFHB;ENST00000498089.1_1_3:19936277-19975510:-|nuORF	nc|ENSG00000163576|Q8N7U6-3|EFHB	nc|ENSG00000163576|Q8N7U6-3|EFHB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3141479492188	2	516.314692	1030.61483	-1.5619	-0.00080641	0.27971	0.00014442	-1.2821	-0.00066199	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86791	1	12571	12571		28.254	2.8041	1	4038100			47819	5829	32160	32173	53990	53990					0.10074799622361752
RHHPPVLVSSA	11	Unmodified	_RHHPPVLVSSA_					0	0	0		nc|ENSG00000038382|O75962-5|TRIO;nc|ENSG00000038382|O75962-2|TRIO;ENSG00000038382|ENST00000344204|TRIO;ENST00000515144.5_1_5:14293150-14488426:+|nuORF;nc|ENSG00000038382|O75962-4|TRIO	nc|ENSG00000038382|O75962-5|TRIO	nc|ENSG00000038382|O75962-5|TRIO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	600.3318481445312	2	600.335821	1198.65709	-0.5349	-0.00032112	-2.6296	-0.0015786	-3.1645	-0.0018998	600.3340485202916	94.432	2.5436	94.5	93.254	95.798	0.068336					116	60	2	0	0	0	0.66929	1	9841	9841		36.447	7.2767	1	428900			47820	14744	32161	32174	53991	53991					0.06570730240082412
RHIKLSIILRW	11	Unmodified	_RHIKLSIILRW_					0	0	0			REV__chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	REV__chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9755554199219	3	478.973384	1433.89832	-1.6051	-0.0007688	3.9699	0.0019015	2.3648	0.0011327	478.9751768575692	49.706	2.3794	49.706	48.538	50.918	0					127	57	3	0	0	0	0.79945	1	3919	3919		11.455	4.1133	1	134370	+		47821	15661	32162	32175	53992	53992					0.19872965947160992
RHIKLSIILRW	11	Unmodified	_RHIKLSIILRW_					0	0	0			REV__chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	REV__chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3092956542969	3	478.973384	1433.89832	-1.5624	-0.00074834	3.9921	0.0019121	2.4297	0.0011638	479.30961963549026	52.606	1.2577	52.606	52.057	53.314	0					69	33	3	0	0	0	0.81219	1	4336	4336		8.7993	0	1	125180	+		47822	15661	32162	32175	53993	53993					0.19872965947160992
RHILDQKIGK	10	Unmodified	_RHILDQKIGK_					0	0	0			REV__ENST00000552207.1_1_12:56188062-56211500:-|nuORF	REV__ENST00000552207.1_1_12:56188062-56211500:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3657836914062	2	604.367121	1206.71969	-0.12671	-7.6581E-05	-0.17423	-0.0001053	-0.30095	-0.00018188	604.3667576937121	114.61	2.863	114.64	114.11	116.97	0.026466					110	87	2	0	0	0	0.85251	1	12698	12698		19.997	9.7315	1	97003	+		47823	23549	32163	32176	53994	53994					0.12459876308253115
RHILDQKIGK	10	Unmodified	_RHILDQKIGK_					0	0	0			REV__ENST00000552207.1_1_12:56188062-56211500:-|nuORF	REV__ENST00000552207.1_1_12:56188062-56211500:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	604.367121	1206.71969	0.90474	0.00054679	-1.864	-0.0011265	-0.95927	-0.00057975	604.8678023547345	114.58	0.17273	114.64	114.55	114.73	0.061073	-0.0012976	-0.0018879	NaN	19.997	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33968	+		47824	23549	32163	32176							0.12459876308253115
RHKDRVRPP	9	Unmodified	_RHKDRVRPP_					0	0	0			REV__ENST00000244815.9_2_2:238671720-238671768:+|nuORF	REV__ENST00000244815.9_2_2:238671720-238671768:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.8405151367188	2	580.841605	1159.66866	-0.88113	-0.0005118	-1.0136	-0.00058872	-1.8947	-0.0011005	580.8408357600173	69.895	0.91608	69.925	69.626	70.542	0.030502					112	46	3	0	0	0	0.7932	1	6601	6601		17.365	1.7232	1	15247000	+		47825	24248	32164	32177	53995	53995					0.09520972054087906
RHKHRRLLHLL	11	Unmodified	_RHKHRRLLHLL_					0	0	0			REV__ENST00000451963.1_2_7:99818153-99818871:+|nuORF	REV__ENST00000451963.1_2_7:99818153-99818871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.9835510253906	3	493.647894	1477.92185	0.24426	0.00012058	3.1224	0.0015414	3.3667	0.001662	493.6494164548298	44.568	2.4513	44.545	43.895	46.346	-0.023079					82	57	2	0	0	0	0.80593	1	3428	3428		10.104	4.1029	1	516410	+		47826	23615	32165	32178	53996	53996					0.20200824504354387
RHKIIAATIEN	11	Unmodified	_RHKIIAATIEN_					0	0	0		ENST00000414673.5_1_17:16734454-16736059:-|nuORF	ENST00000414673.5_1_17:16734454-16736059:-|nuORF	ENST00000414673.5_1_17:16734454-16736059:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3689575195312	2	633.369861	1264.72517	1.5976	0.0010119	-2.7562	-0.0017457	-1.1585	-0.00073377	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.75457	1	11788	11788		12.207	0	1	10012000			47827	11371	32166	32179	53997	53997					0.1033955510006308
RHKITKRGQ	9	Unmodified	_RHKITKRGQ_					0	0	0		nc|ENSG00000278030|P04435|TRBV7-9	nc|ENSG00000278030|P04435|TRBV7-9	nc|ENSG00000278030|P04435|TRBV7-9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	562.3466796875	2	562.343981	1122.67341	0.40646	0.00022857	-1.0806	-0.00060764	-0.6741	-0.00037907	562.3432469329894	90.325	4.336	90.539	89.434	93.77	0.21404					201	103	3	0	0	0	0.7932	1	9146	9146		7.6903	0	1	624710			47828	15318	32167	32180	53998	53998					0.11697856196815337
RHLANATT	8	Unmodified	_RHLANATT_					0	0	0		ENSG00000124194|ENST00000342560|GDAP1L1;nc|ENSG00000124194|Q96MZ0-4|GDAP1L1	ENSG00000124194|ENST00000342560|GDAP1L1	ENSG00000124194|ENST00000342560|GDAP1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.24090576171875	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.90983	1	8071	8071		42.396	3.59	1	1068200			47829	3314	32168	32181	53999	53999					0.021228632976999506
RHLANATT	8	Unmodified	_RHLANATT_					0	0	0		ENSG00000124194|ENST00000342560|GDAP1L1;nc|ENSG00000124194|Q96MZ0-4|GDAP1L1	ENSG00000124194|ENST00000342560|GDAP1L1	ENSG00000124194|ENST00000342560|GDAP1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2406921386719	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.86677	1	8255	8255		27.882	0	1	1238700			47830	3314	32168	32181	54000	54000					0.021228632976999506
RHLFLLLN	8	Unmodified	_RHLFLLLN_					0	0	0			REV__ENSG00000177570|ENST00000314727|SAMD12	REV__ENSG00000177570|ENST00000314727|SAMD12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3174438476562	2	513.316369	1024.61818	-1.3651	-0.00070072	2.2159	0.0011375	0.85085	0.00043675	513.3175456130648	53.876	2.1608	53.876	52.509	54.67	0					97	64	3	0	0	0	0.87922	1	4527	4527		31.955	0	1	276500	+		47831	22218	32169	32182	54001	54001					0.10686049676382936
RHLFSLRDRL	10	Unmodified	_RHLFSLRDRL_					0	0	0			REV__nc|ENSG00000167302|Q96N21|TEPSIN	REV__nc|ENSG00000167302|Q96N21|TEPSIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.25836181640625	3	438.258072	1311.75239	1.6079	0.00070467	-2.4566	-0.0010766	-0.84868	-0.00037194	438.2569039821351	29.892	1.3479	29.877	29.524	30.872	-0.015167					99	34	5	0	0	0	0.85086	1	1609	1609		19.263	2.0959	1	559550	+		47832	21374	32170	32183	54002	54002					0.10898083431129635
RHLGAATN	8	Unmodified	_RHLGAATN_					0	0	0			REV__ENST00000454928.5_2_2:110705383-110742349:+|nuORF	REV__ENST00000454928.5_2_2:110705383-110742349:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.22845458984375	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.87479	1	7914	7914		30.504	1.3541	1	743780	+		47833	26936	32171	32184	54003	54003					0.015265941262100569
RHLLATVF	8	Unmodified	_RHLLATVF_					0	0	0		ENST00000484693.1_1_6:30709216-30709507:-|nuORF;ENST00000484168.1_1_6:30709216-30709966:-|nuORF	ENST00000484693.1_1_6:30709216-30709507:-|nuORF	ENST00000484693.1_1_6:30709216-30709507:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.7857360839844	2	478.787444	955.560336	-0.098425	-4.7125E-05	-2.8398	-0.0013597	-2.9382	-0.0014068	478.78530530827464	92.434	2.0709	92.504	91.595	93.666	0.06987					117	48	4	0	0	0	0.88915	1	9570	9570		35.201	6.9464	1	727550			47834	12530	32172	32185	54004	54004					0.0807778775093766
RHLLEALWL	9	Unmodified	_RHLLEALWL_					0	0	0		nc|ENSG00000107036|Q4ADV7-3|RIC1;ENSG00000107036|ENST00000414202|RIC1;nc|ENSG00000107036|Q4ADV7-2|RIC1	nc|ENSG00000107036|Q4ADV7-3|RIC1	nc|ENSG00000107036|Q4ADV7-3|RIC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8425903320312	2	575.840208	1149.66586	0.78302	0.0004509	3.9888	0.0022969	4.7719	0.0027478	575.8423757005949	90.383	2.7025	90.537	88.725	91.427	0.15388					214	64	4	0	0	0	0.78058	1	8998	8998		30.504	1.3336	1	2399100			47835	2328	32173	32186	54005	54005					0.09701703876544343
RHLLVEGA	8	Unmodified	_RHLLVEGA_					0	0	0			REV__ENSG00000053900|ENST00000315368|ANAPC4	REV__ENSG00000053900|ENST00000315368|ANAPC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7615966796875	2	447.761426	893.5083	-0.088431	-3.9596E-05	-1.2083	-0.00054104	-1.2968	-0.00058064	447.7610086963675	23.767	2.5137	23.385	22.449	24.963	-0.38178					185	57	6	0	0	0	0.884	1	1200	1200		33.516	0	1	39013000	+		47836	16393	32174	32187	54006	54006					0.05728624337189103
RHLNVSAS	8	Unmodified	_RHLNVSAS_					0	0	0		ENST00000481849.5_1_6:31321947-31322043:-|nuORF	ENST00000481849.5_1_6:31321947-31322043:-|nuORF	ENST00000481849.5_1_6:31321947-31322043:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24078369140625	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.87479	1	7540	7540		30.504	0	1	716910			47837	12472	32175	32188	54007	54007					0.021228632977113193
RHLPAKGP	8	Unmodified	_RHLPAKGP_					0	0	0			REV__ENST00000339570.9_1_12:125262560-125262674:-|nuORF	REV__ENST00000339570.9_1_12:125262560-125262674:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2630615234375	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.81548	1	2776	2776		20.482	1.1219	1	21381000	+		47838	25235	32176	32189	54008	54008					0.07144347919654592
RHLPSQCWRTW	11	Unmodified	_RHLPSQCWRTW_					0	0	0		nc|ENSG00000124126|Q8TCU6-3|PREX1	nc|ENSG00000124126|Q8TCU6-3|PREX1	nc|ENSG00000124126|Q8TCU6-3|PREX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.57940673828125	3	490.578817	1468.71462	0.23176	0.0001137	1.0166	0.00049874	1.2484	0.00061244	490.57933719725315	18.437	1.0345	17.96	17.703	18.738	-0.47694					60	22	5	0	0	0	0.67568	1	389	389		35.496	5.3565	1	1434900			47839	14887	32177	32190	54009	54009					-0.0009875082600956375
RHLQLAVRN	9	Unmodified	_RHLQLAVRN_					0	0	0		ENSG00000184270|ENST00000331128|H2AC21	ENSG00000184270|ENST00000331128|H2AC21	ENSG00000184270|ENST00000331128|H2AC21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8302001953125	2	553.830706	1105.64686	2.0416	0.0011307	-3.0404	-0.0016839	-0.99881	-0.00055317	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.78058	1	9528	9528		30.504	1.3541	1	5457600			47840	7596	32178	32191	54010	54010					0.09826167305504896
RHLQLAVRN	9	Unmodified	_RHLQLAVRN_					0	0	0		ENSG00000184270|ENST00000331128|H2AC21	ENSG00000184270|ENST00000331128|H2AC21	ENSG00000184270|ENST00000331128|H2AC21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.830078125	2	553.830706	1105.64686	1.287	0.00071279	-2.2482	-0.0012451	-0.96123	-0.00053236	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.7932	1	9372	9372		24.203	1.1603	1	5348100			47841	7596	32178	32191	54011	54011					0.09826167305504896
RHLRRVLCHRL	11	Unmodified	_RHLRRVLCHRL_					0	0	0		nc|ENSG00000115289|Q9BSM1-3|PCGF1;ENST00000475863.5_1_2:74732272-74734286:-|nuORF;ENSG00000115289|ENST00000233630|PCGF1	nc|ENSG00000115289|Q9BSM1-3|PCGF1	nc|ENSG00000115289|Q9BSM1-3|PCGF1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.9580993652344	3	486.961484	1457.86262	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.8	1	102.85	102.35	103.35	0.043198								0	0	0	0.56276	1	11130	11130		17.833	1.3033	1				47842	2830	32179	32192	54012	54012					0.15200605218524288
RHLSHKIGL	9	Unmodified	_RHLSHKIGL_					0	0	0			REV__ENSG00000110841|ENST00000228425|PPFIBP1	REV__ENSG00000110841|ENST00000228425|PPFIBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.8208618164062	2	530.82235	1059.63015	1.1117	0.00059012	-3.7818	-0.0020075	-2.6701	-0.0014174	530.8202358745281	82.61	1.5277	82.544	82.018	83.546	-0.066185					83	35	4	0	0	0	0.78983	1	8411	8411		27.882	1.0861	1	1339600	+		47843	17833	32180	32193	54013	54013					0.10271666419566827
RHNRDDEAIK	10	Unmodified	_RHNRDDEAIK_					0	0	0		ENSG00000197557|ENST00000355689|TTC30A;ENSG00000196659|ENST00000408939|TTC30B	ENSG00000197557|ENST00000355689|TTC30A	ENSG00000197557|ENST00000355689|TTC30A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3201904296875	2	627.320899	1252.62725	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.805	1	61.912	61.412	62.412	0.10743								0	0	0	0.45132	1	5373	5373		49.536	3.5638	1				47844	8088	32181	32194	54014	54014					0.011037465040772076
RHNVGVPSN	9	Unmodified	_RHNVGVPSN_					0	0	0			REV__ENST00000478378.5_1_1:201924654-201931951:+|nuORF	REV__ENST00000478378.5_1_1:201924654-201931951:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.2588806152344	2	490.25704	978.499526	1.5736	0.00077149	0.44195	0.00021667	2.0156	0.00098816	490.25714425919216	107.1	2.1346	107.2	105.77	107.9	0.10396					168	84	3	0	0	0	0.67345	1	13105	13105		42.396	3.59	1	1431500	+		47845	19138	32182	32195	54015	54015					0.009416507007131258
RHPLVYVV	8	Unmodified	_RHPLVYVV_					0	0	0		nc|ENSG00000149305|O95264-2|HTR3B;ENSG00000149305|ENST00000260191|HTR3B	nc|ENSG00000149305|O95264-2|HTR3B	nc|ENSG00000149305|O95264-2|HTR3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7956848144531	2	491.795269	981.575986	-0.0088364	-4.3457E-06	1.0535	0.0005181	1.0447	0.00051376	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.82464	1	4781	4781		21.702	1.2205	1	782460			47846	5017	32183	32196	54016	54016					0.08446074267999393
RHPPARKGL	9	Unmodified	_RHPPARKGL_					0	0	0		ENST00000402673.6_1_5:133968445-133968544:-|nuORF	ENST00000402673.6_1_5:133968445-133968544:-|nuORF	ENST00000402673.6_1_5:133968445-133968544:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3150024414062	2	516.314692	1030.61483	-1.5619	-0.00080641	0.27971	0.00014442	-1.2821	-0.00066199	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12717	12717		24.203	0	1	4038100			47847	11245	32184	32197	54017	54017					0.10074799622361752
RHPQRQRR	8	Unmodified	_RHPQRQRR_					0	0	0		ENST00000338745.10_3_3:18466531-18466693:-|nuORF;ENST00000450898.1_1_3:18465198-18466693:-|nuORF	ENST00000338745.10_3_3:18466531-18466693:-|nuORF	ENST00000338745.10_3_3:18466531-18466693:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3269653320312	2	567.329196	1132.64384	1.3743	0.0007797	0.010867	6.1654E-06	1.3852	0.00078587	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.84341	1	11065	11065		24.203	0	1	6182600			47848	10208	32185	32198	54018	54018					0.08282336971365112
RHPRLRSV	8	Unmodified	_RHPRLRSV_					0	0	0			REV__ENST00000601340.5_1_19:50059010-50059717:-|nuORF	REV__ENST00000601340.5_1_19:50059010-50059717:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8117370605469	2	510.812316	1019.61008	4.704	0.0024028	-3.382	-0.0017276	1.3219	0.00067527	510.81038527976574	106.02	0.73642	106.21	105.87	106.6	0.18647					70	29	3	0	0	0	0.89043	1	12974	12974		35.618	3.6634	1	1170500	+		47849	29319	32186	32199	54019	54019					0.10105915479596206
RHPRRSVL	8	Unmodified	_RHPRRSVL_					0	0	0		ENST00000005340.9_1_17:7137570-7137852:-|nuORF	ENST00000005340.9_1_17:7137570-7137852:-|nuORF	ENST00000005340.9_1_17:7137570-7137852:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.81353759765625	2	510.812316	1019.61008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.25	1	105.43	104.93	105.93	0.18647								0	0	0	0.29568	1	12867	12867		35.201	4.6971	1				47850	9066	32187	32200	54020	54020					0.10105915479596206
RHQRHSLLRKP	11	Unmodified	_RHQRHSLLRKP_					0	0	0		ENST00000465425.1_1_19:36494241-36496384:-|nuORF;nc|ENSG00000181392|Q8N205-2|SYNE4;ENSG00000181392|ENST00000324444|SYNE4	ENST00000465425.1_1_19:36494241-36496384:-|nuORF	ENST00000465425.1_1_19:36494241-36496384:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.623291015625	3	476.620004	1426.83818	3.7397	0.0017824	3.4554	0.0016469	7.1951	0.0034293	476.62154856038563	107.85	0.22624	107.96	107.81	108.04	0.11715					18	6	3	0	0	0	0.76892	1	13195	13195		17.833	4.3252	1	5038900			47851	7385	32188	32201	54021	54021					0.14183668336613664
RHRARGQRP	9	Unmodified	_RHRARGQRP_					0	0	0		ENST00000499430.6_1_4:4544185-4544311:+|nuORF	ENST00000499430.6_1_4:4544185-4544311:+|nuORF	ENST00000499430.6_1_4:4544185-4544311:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3290405273438	2	567.329196	1132.64384	1.3743	0.0007797	0.010867	6.1654E-06	1.3852	0.00078587	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.78058	1	11360	11360		30.504	2.6214	1	6182600			47852	12834	32189	32202	54022	54022					0.08282336971365112
RHRDYHQHQDH	11	Unmodified	_RHRDYHQHQDH_					0	0	0		ENSG00000175294|ENST00000312106|CATSPER1	ENSG00000175294|ENST00000312106|CATSPER1	ENSG00000175294|ENST00000312106|CATSPER1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.780029296875	3	510.234878	1527.6828	0.05172	2.6389E-05	-0.99974	-0.0005101	-0.94802	-0.00048371	510.2343681293137	26.337	0.4525	26.305	26.1	26.552	-0.032125					21	9	3	0	0	0	0.17996	1	1119	1119		17.167	1.8293	1	28662			47853	7005	32190	32203	54023	54023					-0.059930272555902775
RHRKQTQFLV	10	Unmodified	_RHRKQTQFLV_					0	0	0		ENST00000427574.6_1_11:76155969-76156146:+|nuORF	ENST00000427574.6_1_11:76155969-76156146:+|nuORF	ENST00000427574.6_1_11:76155969-76156146:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.25775146484375	3	438.258072	1311.75239	1.6079	0.00070467	-2.4566	-0.0010766	-0.84868	-0.00037194	438.2569039821351	29.892	1.3479	29.877	29.524	30.872	-0.015167					99	34	5	0	0	0	0.86698	1	1561	1561		28.081	1.0342	1	559550			47854	11579	32191	32204	54024	54024					0.10898083431106897
RHRLEVPR	8	Unmodified	_RHRLEVPR_					0	0	0		ENST00000300849.4_2_16:31085137-31085191:-|nuORF	ENST00000300849.4_2_16:31085137-31085191:-|nuORF	ENST00000300849.4_2_16:31085137-31085191:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.81689453125	2	531.817599	1061.62064	1.8637	0.00099113	-3.2612	-0.0017344	-1.3976	-0.00074324	531.8157444108199	88.686	4.0119	88.613	87.337	91.349	-0.07238					352	95	5	0	0	0	0.87064	1	9407	9407		29.15	1.2673	1	4423300			47855	9797	32192	32205	54025	54025					0.09229898134026371
RHRLEVPR	8	Unmodified	_RHRLEVPR_					0	0	0		ENST00000300849.4_2_16:31085137-31085191:-|nuORF	ENST00000300849.4_2_16:31085137-31085191:-|nuORF	ENST00000300849.4_2_16:31085137-31085191:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8167114257812	2	531.817599	1061.62064	0.70533	0.00037511	-2.1628	-0.0011502	-1.4575	-0.00077513	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.87064	1	8530	8530		29.15	1.2673	1	1163300			47856	9797	32192	32205	54026	54026					0.09229898134026371
RHRLPPSRRPR	11	Unmodified	_RHRLPPSRRPR_					0	0	0		ENST00000592217.2_1_19:46271832-46273041:+|nuORF	ENST00000592217.2_1_19:46271832-46273041:+|nuORF	ENST00000592217.2_1_19:46271832-46273041:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62371826171875	3	476.623748	1426.84942	-1.6911	-0.000806	1.5998	0.0007625	-0.09126	-4.3497E-05	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.78083	1	12545	12545		15.337	2.9046	1	2577100			47857	14286	32193	32206	54027	54027					0.1530649043077119
RHRNPNRPEWN	11	Unmodified	_RHRNPNRPEWN_					0	0	0		ENSG00000179477|ENST00000647874|ALOX12B	ENSG00000179477|ENST00000647874|ALOX12B	ENSG00000179477|ENST00000647874|ALOX12B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.5822448730469	3	492.583618	1474.72903	-1.894	-0.00093293	-1.7655	-0.00086964	-3.6594	-0.0018026	492.5826189537496	25.088	0.53813	25.088	24.895	25.433	0					60	24	3	0	0	0	0.76892	1	890	890		17.833	0	1	155290			47858	7274	32194	32207	54028	54028					0.01065037646503697
RHRPHKRRHCR	11	Unmodified	_RHRPHKRRHCR_					0	0	0			REV__ENST00000265140.9_1_5:93954307-93964559:+|nuORF	REV__ENST00000265140.9_1_5:93954307-93964559:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.9554443359375	3	513.623865	1537.84977	-1.8309	-0.0009404	-2.2289	-0.0011448	-4.0598	-0.0020852	513.6226038173158	41.637	0.4515	42.051	41.823	42.274	0.4139					35	11	4	0	0	0	0.76892	1	3659	3659		17.833	3.0543	1	2391200	+		47859	24489	32195	32208	54029	54029					0.1023558687898003
RHRRRRRWWW	10	Unmodified	_RHRRRRRWWW_					0	0	0			REV__ENST00000475204.5_1_1:70687068-70687435:+|nuORF	REV__ENST00000475204.5_1_1:70687068-70687435:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.9775390625	3	550.978637	1649.91408	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.082	1	58.161	57.661	58.661	0.079643								0	0	0	0.45132	1	4928	4928		4.3388	0.25591	1		+		47860	25673	32196	32209	54030	54030					0.11512110027433664
RHSASLTK	8	Unmodified	_RHSASLTK_					0	0	0			REV__ENSG00000213199|ENST00000349064|ASIC3	REV__ENSG00000213199|ENST00000349064|ASIC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.25823974609375	2	450.256508	898.498464	2.5113	0.0011307	1.4582	0.00065657	3.9695	0.0017873	450.25712397191535	26.02	1.659	25.589	25.109	26.768	-0.4311					129	37	5	0	0	0	0.73851	1	1387	1387		65.803	2.4969	1	8434200	+		47861	23610	32197	32210	54031	54031					0.04515436331791989
RHSKSKSS	8	Unmodified	_RHSKSKSS_					0	0	0			REV__nc|ENSG00000159140|P18583-6|SON	REV__nc|ENSG00000159140|P18583-6|SON	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7514343261719	2	458.75159	915.488627	1.1793	0.00054099	0.20947	9.6095E-05	1.3887	0.00063709	458.75130962594056	23.717	1.8273	23.143	22.747	24.574	-0.57415					83	41	4	0	0	0	0.9283	1	1108	1108		49.442	8.6634	1	885740	+		47862	20639	32198	32211	54032	54032					0.02750248326435667
RHSQTTDAPQ	10	Unmodified	_RHSQTTDAPQ_					0	0	0		nc|ENSG00000188153|P29400|COL4A5;ENSG00000188153|ENST00000328300|COL4A5	nc|ENSG00000188153|P29400|COL4A5	nc|ENSG00000188153|P29400|COL4A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.7691650390625	2	570.773251	1139.53195	-1.0878	-0.0006209	-2.7845	-0.0015893	-3.8723	-0.0022102	570.7715868891898	56.291	0.56245	56.28	55.771	56.334	-0.010136					29	19	2	0	0	0	0.86471	1	5020	5020		30.318	2.2362	1	395810			47863	7908	32199	32212	54033	54033					-0.03223606686970015
RHSRAPSPLL	10	Unmodified	_RHSRAPSPLL_					0	0	0			REV__ENST00000257359.6_1_11:130297588-130298293:-|nuORF	REV__ENST00000257359.6_1_11:130297588-130298293:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3277587890625	2	567.330539	1132.64652	2.9387	0.0016672	-3.9731	-0.0022541	-1.0344	-0.00058686	567.3283043760771	116.2	1.239	116.18	115.69	116.93	-0.02433					56	40	2	0	0	0	0.86348	1	12933	12933		31.53	2.3803	1	94442	+		47864	24340	32200	32213	54034	54034					0.0855074758567298
RHSSEKLSKLT	11	Unmodified	_RHSSEKLSKLT_					0	0	0			REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.372314453125	2	643.364776	1284.715	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.89	1	114.83	114.33	115.33	-0.05722								0	0	0	0.56276	1	12300	12300		27.047	0.3544	1		+		47865	20880	32201	32214	54035	54035					0.08402947374861469
RHSSEKLSKLT	11	Unmodified	_RHSSEKLSKLT_					0	0	0			REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.3692626953125	2	643.364776	1284.715	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.09	1	115.03	114.53	115.53	-0.05722								0	0	0	0.56276	1	12327	12327		27.047	6.1004	1		+		47866	20880	32201	32214	54036	54036					0.08402947374861469
RHSVGAVTG	9	Unmodified	_RHSVGAVTG_					0	0	0		ENST00000478590.1_1_15:66206003-66207886:-|nuORF;nc|ENSG00000157890|A6BM72-4|MEGF11;ENST00000490495.5_1_15:66202139-66208942:-|nuORF;nc|ENSG00000157890|A6BM72-2|MEGF11;nc|ENSG00000157890|A6BM72|MEGF11;chr15:66128411-66253605|48|19.02|0.49|5.27|-|ENST00000422354|MEGF11,MEGF11;ENSG00000157890|ENST00000395614|MEGF11	ENST00000478590.1_1_15:66206003-66207886:-|nuORF	ENST00000478590.1_1_15:66206003-66207886:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.24090576171875	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.78536	1	7852	7852		29.15	0	1	1219900			47867	189	32202	32215	54037	54037					0.021228632977113193
RHSVVAGGG	9	Unmodified	_RHSVVAGGG_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;nc|ENSG00000155506|Q6PKG0-3|LARP1	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22808837890625	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.77546	1	7653	7653		31.955	2.8053	1	678130			47868	5325	32203	32216	54038	54038					0.015265941262441629
RHTGKRKQVR	10	Unmodified	_RHTGKRKQVR_					0	0	0			REV__nc|ENSG00000203896|Q9H400-2|LIME1	REV__nc|ENSG00000203896|Q9H400-2|LIME1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.59222412109375	3	422.593566	1264.75887	-0.14442	-6.1032E-05	-1.8866	-0.00079727	-2.031	-0.0008583	422.5926654554972	55.449	1.1746	55.439	55.01	56.184	-0.010132					83	31	3	0	0	0	0.86802	1	4890	4890		27.047	4.4677	1	310110	+		47869	23446	32204	32217	54039	54039					0.13708021382490188
RHTLILLLARL	11	Unmodified	_RHTLILLLARL_					0	0	0			REV__ENST00000357700.10_1_10:5681946-5682531:-|nuORF	REV__ENST00000357700.10_1_10:5681946-5682531:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.29217529296875	3	440.294235	1317.86087	-1.4987	-0.00065986	-2.6745	-0.0011776	-4.1732	-0.0018374	440.29287290347224	59.592	1.1212	59.686	59.191	60.312	0.094063					94	32	4	0	0	0	0.76579	1	5133	5133		18.531	4.445	1	285330	+		47870	25421	32205	32218	54040	54040					0.2146587468157577
RHTQLTGP	8	Unmodified	_RHTQLTGP_					0	0	0		ENSG00000015532|ENST00000017003|XYLT2;ENST00000571021.1_1_17:48437265-48437649:+|nuORF	ENSG00000015532|ENST00000017003|XYLT2	ENSG00000015532|ENST00000017003|XYLT2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.24737548828125	2	455.248683	908.482814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.69	1	52.666	52.166	53.166	-0.023849								0	0	0	0.29264	1	4671	4671		29.15	2.3535	1				47871	824	32206	32219	54041	54041					0.024911498147503153
RHVLPLPP	8	Unmodified	_RHVLPLPP_					0	0	0			REV__ENST00000262370.11_1_16:4740150-4740852:+|nuORF	REV__ENST00000262370.11_1_16:4740150-4740852:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7925720214844	2	464.789987	927.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.234	1	36.174	35.674	36.674	-0.060333								0	0	0	0.30004	1	1977	1977		21.702	2.3424	1		+		47872	24416	32207	32220	54042	54042					0.09874091613551172
RHVLTMDDL	9	Unmodified	_RHVLTMDDL_					0	0	0		ENSG00000161956|ENST00000321337|SENP3;ENST00000580997.1_1_17:7468099-7469096:+|nuORF;ENST00000583277.1_1_17:7468610-7469096:+|nuORF	ENSG00000161956|ENST00000321337|SENP3;ENST00000583277.1_1_17:7468610-7469096:+|nuORF	ENSG00000161956|ENST00000321337|SENP3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.7816772460938	2	550.281866	1098.54918	-1.0732	-0.00059057	-1.9466	-0.0010712	-3.0198	-0.0016617	550.2805312740918	60.534	0.56399	60.534	60.264	60.828	0					42	21	3	0	0	0	0.67345	1	5311	5311		42.396	1.618	1	65788			47873	5660;14120	32208	32221	54043	54043					0.0038459759448414843
RHVLTMDDL	9	Unmodified	_RHVLTMDDL_					0	0	0		ENSG00000161956|ENST00000321337|SENP3;ENST00000580997.1_1_17:7468099-7469096:+|nuORF;ENST00000583277.1_1_17:7468610-7469096:+|nuORF	ENSG00000161956|ENST00000321337|SENP3;ENST00000583277.1_1_17:7468610-7469096:+|nuORF	ENSG00000161956|ENST00000321337|SENP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	550.281866	1098.54918	0.80447	0.00044269	-4.7067	-0.00259	-3.9023	-0.0021473	550.2786189303928	60.579	0.20883	60.546	60.395	60.604	-0.032509	0.0060288	-0.0025211	NaN	42.396	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36589			47874	5660;14120	32208	32221							0.0038459759448414843
RHVTNRLF	8	Unmodified	_RHVTNRLF_					0	0	0			REV__nc|ENSG00000166133|Q8IZ73-2|RPUSD2	REV__nc|ENSG00000166133|Q8IZ73-2|RPUSD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	521.8005981445312	2	521.798875	1041.5832	0.36603	0.00019099	2.2358	0.0011666	2.6018	0.0013576	521.7998993312532	77.521	0.82666	77.471	77.244	78.071	-0.050789					80	35	3	0	0	0	0.88944	1	7695	7695		57.811	0	1	566060	+		47875	21253	32209	32222	54044	54044					0.06406806868426429
RHWRAYLRRKQ	11	Unmodified	_RHWRAYLRRKQ_					0	0	0		ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.3016357421875	3	523.971037	1568.89128	0.62669	0.00032836	-3.4715	-0.001819	-2.8448	-0.0014906	524.3035408349213	60.228	0.68466	60.197	59.946	60.631	-0.031727					40	17	3	0	0	0	0.7896	1	5672	5672		13.508	7.1871	1	177940			47876	1155	32210	32223	54045	54045					0.12959046119271989
RHWRKWSCVLR	11	Unmodified	_RHWRKWSCVLR_					0	0	0		ENST00000543086.7_1_12:1192471-1192564:+|nuORF	ENST00000543086.7_1_12:1192471-1192564:+|nuORF	ENST00000543086.7_1_12:1192471-1192564:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.9494323730469	3	509.613973	1525.82009	-1.755	-0.00089438	3.3059	0.0016847	1.5508	0.00079033	509.61555556193184	28.54	1.0683	28.54	27.927	28.995	0					107	46	3	0	0	0	0.74771	1	1221	1221		22.562	2.5311	1	157640			47877	13548	32211	32224	54046	54046					0.07821210090287423
RHYRIKHNNVR	11	Unmodified	_RHYRIKHNNVR_					0	0	0		nc|ENSG00000148143|Q96JM2-3|ZNF462;ENSG00000148143|ENST00000277225|ZNF462;nc|ENSG00000148143|Q96JM2-2|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.2813720703125	3	498.283392	1491.82835	0.19127	9.5308E-05	-1.0381	-0.00051727	-0.84682	-0.00042196	498.28272038181507	33.175	0.58385	33.285	32.974	33.558	0.10991					55	26	3	0	0	0	0.76251	1	1603	1603		19.263	6.8298	1	250960			47878	4934	32212	32225	54047	54047					0.10210480331261351
RIAALDPE	8	Unmodified	_RIAALDPE_					0	0	0		ENSG00000172071|ENST00000303236|EIF2AK3	ENSG00000172071|ENST00000303236|EIF2AK3	ENSG00000172071|ENST00000303236|EIF2AK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7447204589844	2	442.745442	883.476331	-0.84967	-0.00037619	-0.44682	-0.00019783	-1.2965	-0.00057401	442.74508565704974	91.361	1.8975	91.832	90.855	92.753	0.47068					98	45	4	0	0	0	0.89494	1	10849	10849		37.159	5.2042	1	3563500			47879	6739	32213	32226	54048	54048					0.029932118633723803
RIADRVGGT	9	Unmodified	_RIADRVGGT_					0	0	0		ENST00000342081.7_1_4:74477471-74486347:-|nuORF	ENST00000342081.7_1_4:74477471-74486347:-|nuORF	ENST00000342081.7_1_4:74477471-74486347:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.76715087890625	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.76764	1	8527	8527		34.173	0	1	547170			47880	10255	32214	32227	54049	54049					0.04590821360534392
RIAKKGKSNTY	11	Unmodified	_RIAKKGKSNTY_					0	0	0			REV__ENSG00000158023|ENST00000288912|CFAP251	REV__ENSG00000158023|ENST00000288912|CFAP251	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3693237304688	2	633.369861	1264.72517	-0.11908	-7.5423E-05	-0.90029	-0.00057022	-1.0194	-0.00064564	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.66929	1	9694	9694		36.447	9.7538	1	2722900	+		47881	20581	32215	32228	54050	54050					0.10339555100085818
RIAKKGKSNTY	11	Unmodified	_RIAKKGKSNTY_					0	0	0			REV__ENSG00000158023|ENST00000288912|CFAP251	REV__ENSG00000158023|ENST00000288912|CFAP251	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3677978515625	2	633.369861	1264.72517	1.4675	0.00092945	-2.7221	-0.0017241	-1.2546	-0.00079462	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.6593	2	9899	9815;9899		35.152	1.2304	1	5460600	+		47882	20581	32215	32228	54051;54052	54052					0.10339555100085818
RIAKKGKSNTY	11	Unmodified	_RIAKKGKSNTY_					0	0	0			REV__ENSG00000158023|ENST00000288912|CFAP251	REV__ENSG00000158023|ENST00000288912|CFAP251	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.368896484375	2	633.369861	1264.72517	1.4714	0.00093196	-2.6119	-0.0016543	-1.1404	-0.0007223	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.6396	4	10192	9954;10014;10168;10192		30.318	0	1	11430000	+		47883	20581	32215	32228	54053;54054;54055;54056	54056					0.10339555100085818
RIAKKLSEKDR	11	Unmodified	_RIAKKLSEKDR_					0	0	0			REV__nc|ENSG00000136811|Q5BJF6-2|ODF2	REV__nc|ENSG00000136811|Q5BJF6-2|ODF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.6096496582031	3	448.60877	1342.80448	-1.309	-0.00058724	2.7202	0.0012203	1.4112	0.00063306	448.60976401690687	76.777	1.1377	76.902	76.414	77.552	0.12485					110	49	3	0	0	0	0.75457	1	7186	7186		21.032	6.9462	1	879130	+		47884	19334	32216	32229	54057	54057					0.14679202054207963
RIAKRTDLEG	10	Unmodified	_RIAKRTDLEG_					0	0	0			REV__ENSG00000125966|ENST00000246186|MMP24	REV__ENSG00000125966|ENST00000246186|MMP24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.8310546875	2	579.833111	1157.65167	-0.03296	-1.9111E-05	-2.6856	-0.0015572	-2.7186	-0.0015763	579.8313370706231	82.024	1.0108	82.082	81.677	82.688	0.057816					59	22	4	0	0	0	0.35939	1	8181	8181		67.494	10.773	1	340990	+		47885	18686	32217	32230	54058	54058					0.07915006657594859
RIAKSYQAS	9	Unmodified	_RIAKSYQAS_					0	0	0		nc|ENSG00000107099|Q8NF50-4|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;ENSG00000107099|ENST00000432829|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.2818603515625	2	512.282723	1022.55089	0.66671	0.00034154	-3.5842	-0.0018361	-2.9175	-0.0014946	512.2807919302783	84.375	1.7701	84.523	83.526	85.296	0.14793					72	40	2	0	0	0	0.77696	1	8148	8148		31.53	2.3803	1	117460			47886	2330	32218	32231	54059	54059					0.0405197467475773
RIALKLVG	8	Unmodified	_RIALKLVG_					0	0	0		ENSG00000100714|ENST00000652337|MTHFD1;ENST00000556771.5_1_14:64906939-64911458:+|nuORF	ENSG00000100714|ENST00000652337|MTHFD1	ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.30010986328125	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.82464	3	6744	6721;6737;6744		37.028	3.0454	1	1072400			47887	1861	32219	32232	54060;54061;54062	54062					0.14627262273359065
RIALKLVG	8	Unmodified	_RIALKLVG_					0	0	0		ENSG00000100714|ENST00000652337|MTHFD1;ENST00000556771.5_1_14:64906939-64911458:+|nuORF	ENSG00000100714|ENST00000652337|MTHFD1	ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.30047607421875	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.82464	4	7092	7092;7100;7115;7123		29.842	3.0454	1	1680500			47888	1861	32219	32232	54063;54064;54065;54066	54063					0.14627262273359065
RIALKLVG	8	Unmodified	_RIALKLVG_					0	0	0		ENSG00000100714|ENST00000652337|MTHFD1;ENST00000556771.5_1_14:64906939-64911458:+|nuORF	ENSG00000100714|ENST00000652337|MTHFD1	ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3003234863281	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.86791	1	7273	7273		28.254	2.8041	1	881780			47889	1861	32219	32232	54067	54067					0.14627262273359065
RIALKLVG	8	Unmodified	_RIALKLVG_					0	0	0		ENSG00000100714|ENST00000652337|MTHFD1;ENST00000556771.5_1_14:64906939-64911458:+|nuORF	ENSG00000100714|ENST00000652337|MTHFD1	ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3003234863281	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.82464	3	7140	7140;7148;7176		46.766	2.3424	1	1921500			47890	1861	32219	32232	54068;54069;54070	54068					0.14627262273359065
RIALKLVG	8	Unmodified	_RIALKLVG_					0	0	0		ENSG00000100714|ENST00000652337|MTHFD1;ENST00000556771.5_1_14:64906939-64911458:+|nuORF	ENSG00000100714|ENST00000652337|MTHFD1	ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.300048828125	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.86791	3	6797	6797;6806;6849		29.842	2.8041	1	2081500			47891	1861	32219	32232	54071;54072;54073	54071					0.14627262273359065
RIALKLVG	8	Unmodified	_RIALKLVG_					0	0	0		ENSG00000100714|ENST00000652337|MTHFD1;ENST00000556771.5_1_14:64906939-64911458:+|nuORF	ENSG00000100714|ENST00000652337|MTHFD1	ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.29986572265625	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.82464	1	6803	6803		21.702	2.3424	1	1852500			47892	1861	32219	32232	54074	54074					0.14627262273359065
RIALKLVG	8	Unmodified	_RIALKLVG_					0	0	0		ENSG00000100714|ENST00000652337|MTHFD1;ENST00000556771.5_1_14:64906939-64911458:+|nuORF	ENSG00000100714|ENST00000652337|MTHFD1	ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.300048828125	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82464	2	8274	8243;8274		28.254	2.8041	1	5485100			47893	1861	32219	32232	54075;54076	54076					0.14627262273359065
RIALKLVG	8	Unmodified	_RIALKLVG_					0	0	0		ENSG00000100714|ENST00000652337|MTHFD1;ENST00000556771.5_1_14:64906939-64911458:+|nuORF	ENSG00000100714|ENST00000652337|MTHFD1	ENSG00000100714|ENST00000652337|MTHFD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3003845214844	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.82464	6	8285	8221;8233;8245;8257;8276;8285		54.765	3.5129	1	6323600			47894	1861	32219	32232	54077;54078;54079;54080;54081;54082	54082					0.14627262273359065
RIAQLEETL	9	Unmodified	_RIAQLEETL_					0	0	0			REV__nc|ENSG00000141519|Q4G0X9-3|CCDC40	REV__nc|ENSG00000141519|Q4G0X9-3|CCDC40	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	536.8038940429688	2	536.803488	1071.59242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.024	1	55.016	54.516	55.516	-0.0077095								0	0	0	0.28386	1	4880	4880		37.159	4.3467	1		+		47895	19691	32220	32233	54083	54083					0.05949110643427957
RIARASLNSGF	11	Unmodified	_RIARASLNSGF_					0	0	0		nc|ENSG00000107829|P57775|FBXW4;ENSG00000107829|ENST00000331272|FBXW4	nc|ENSG00000107829|P57775|FBXW4	nc|ENSG00000107829|P57775|FBXW4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.3324584960938	2	596.333279	1190.652	0.85589	0.0005104	-1.5023	-0.00089585	-0.64637	-0.00038545	596.3322598839247	96.043	3.1049	96.206	95.311	98.416	0.16316					228	72	4	0	0	0	0.45992	1	10007	10007		54.722	20.55	1	1469100			47896	2373	32221	32234	54084	54084					0.06430426377460208
RICHLQRENA	10	Unmodified	_RICHLQRENA_					0	0	0		nc|ENSG00000229089|Q5CZ79|ANKRD20A8P;ENST00000432432.6_1_2:95480778-95522914:-|nuORF;nc|ENSG00000229089|Q5CZ79-2|ANKRD20A8P;nc|ENSG00000291287|Q5SQ80|ANKRD20A2P;nc|ENSG00000276203|Q5VUR7|ANKRD20A3P;nc|ENSG00000172014|Q4UJ75|ANKRD20A4P;ENSG00000260691|ENST00000562196|ANKRD20A1	nc|ENSG00000229089|Q5CZ79|ANKRD20A8P	nc|ENSG00000229089|Q5CZ79|ANKRD20A8P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	620.3214721679688	2	620.322388	1238.63022	0.033353	2.069E-05	-4.4543	-0.0027631	-4.421	-0.0027424	620.3195551884588	44.368	0.51524	44.345	44.097	44.612	-0.023079					22	11	2	0	0	0	0.82886	1	3453	3453		37.812	15.25	1	105460			47897	11667	32222	32235	54085	54085					0.020452983572567973
RIDGILTHKAK	11	Unmodified	_RIDGILTHKAK_					0	0	0			REV__nc|ENSG00000164089|Q8TBG4-3|ETNPPL	REV__nc|ENSG00000164089|Q8TBG4-3|ETNPPL	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3814086914062	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.13	1	117.05	116.55	117.55	-0.082458								0	0	0	0.56276	1	12598	12598		23.523	2.5758	1		+		47898	21030	32223	32236	54086	54086					0.1305614547973164
RIDLLQAFSQL	11	Unmodified	_RIDLLQAFSQL_					0	0	0		nc|ENSG00000143493|Q9NVH2-4|INTS7;nc|ENSG00000143493|Q9NVH2-2|INTS7;ENSG00000143493|ENST00000366994|INTS7;nc|ENSG00000143493|Q9NVH2-3|INTS7;ENST00000462910.1_1_1:212139770-212142034:-|nuORF;ENST00000461212.5_1_1:212125793-212148678:-|nuORF	nc|ENSG00000143493|Q9NVH2-4|INTS7	nc|ENSG00000143493|Q9NVH2-4|INTS7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2495422363281	3	435.250472	1302.72959	0.44646	0.00019432	-3.3836	-0.0014727	-2.9371	-0.0012784	435.24889616353823	18.626	0.42133	18.149	17.983	18.404	-0.47694					24	8	4	0	0	0	0.69071	1	429	429		33.039	4.9579	1	259940			47899	4636	32224	32237	54087	54087					0.09033019523008079
RIEAKIKNDGF	11	Unmodified	_RIEAKIKNDGF_					0	0	0			REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	644.8632202148438	2	645.861869	1289.70918	-1.1414	-0.00073719	-2.8194	-0.0018209	-3.9608	-0.0025581	645.861023778075	112.18	0.63227	112.16	111.88	112.51	-0.01989					39	20	3	0	0	0	0.17552	1	11947	11947		23.523	0	1	1379300	+		47900	21608	32225	32238	54088	54088					0.07591848863148698
RIEAKIKNDGF	11	Unmodified	_RIEAKIKNDGF_					0	0	0			REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	645.861869	1289.70918	1.6042	0.0010361	-5.7081	-0.0036866	-4.1039	-0.0026506	646.3599039061005	112.2	0.28555	112.31	112.2	112.48	0.10638	-0.028726	-0.0022636	NaN	17.468	33	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	896090	+		47901	21608	32225	32238							0.07591848863148698
RIEAKIKNDGF	11	Unmodified	_RIEAKIKNDGF_					0	0	0			REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	645.861869	1289.70918	2.0375	0.0013159	-4.413	-0.0028502	-2.3755	-0.0015342	645.859394816726	112.51	0.43407	112.54	112.42	112.85	0.030602	0.20515	-0.00059061	NaN	17.468	18	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33586	+		47902	21608	32225	32238							0.07591848863148698
RIEKFLPKY	9	Unmodified	_RIEKFLPKY_					0	0	0			REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|51|1|sense	REV__L1PA8A_dup2159|chr14:66701366-66707789:+|2.398928009374464|0.2909126365437136|3.04|63.0|51|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3579711914062	2	597.355691	1192.69683	-0.63804	-0.00038114	1.1877	0.00070948	0.54967	0.00032835	597.3562120432921	59.176	1.2749	59.568	58.941	60.216	0.39209					69	30	3	0	0	0	0.67345	1	6232	6232		42.396	0.96952	1	461870	+		47903	29620	32226	32239	54089	54089					0.10818857190793096
RIESRISKR	9	Unmodified	_RIESRISKR_					0	0	0		L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|28|1|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|28|1|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|28|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	572.8490600585938	2	572.849096	1143.68364	-0.17047	-9.7652E-05	0.60384	0.00034591	0.43337	0.00024826	572.8493038317292	17.117	0.32895	17.038	16.892	17.221	-0.079056					26	12	3	0	0	0	0.6204	1	187	187		45.972	0	1	167180			47904	14577	32227	32240	54090	54090					0.11754419131420946
RIFALSGRR	9	Unmodified	_RIFALSGRR_					0	0	0			REV__ENSG00000066230|ENST00000264938|SLC9A3	REV__ENSG00000066230|ENST00000264938|SLC9A3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3267822265625	2	538.327799	1074.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.79	1	114.82	114.32	115.32	0.026466								0	0	0	0.3307	1	12576	12576		19.997	0.6368	1		+		47905	16519	32228	32241	54091	54091					0.1067106879381754
RIFAPNHVVAK	11	Unmodified	_RIFAPNHVVAK_					0	0	0		ENST00000602216.1_1_19:17970765-17972392:+|nuORF;ENST00000600238.1_1_19:17972170-17973061:+|nuORF;ENSG00000105640|ENST00000222247|RPL18A	ENST00000602216.1_1_19:17970765-17972392:+|nuORF	ENST00000602216.1_1_19:17970765-17972392:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.91583251953125	3	417.915535	1250.72478	-0.40993	-0.00017132	0.48024	0.0002007	0.070316	2.9386E-05	417.91574403887137	30.844	1.0551	30.924	30.546	31.601	0.079834					66	23	4	0	0	0	0.03847	5	2047	2026;2036;2047;2059;2071		104.42	57.684	1	2143500			47906	14400	32229	32242	54092;54093;54094;54095;54096	54094					0.10944180170872642
RIFAPNHVVAK	11	Unmodified	_RIFAPNHVVAK_					0	0	0		ENST00000602216.1_1_19:17970765-17972392:+|nuORF;ENST00000600238.1_1_19:17972170-17973061:+|nuORF;ENSG00000105640|ENST00000222247|RPL18A	ENST00000602216.1_1_19:17970765-17972392:+|nuORF	ENST00000602216.1_1_19:17970765-17972392:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.9155578613281	3	417.915535	1250.72478	0.24366	0.00010183	-0.23933	-0.00010002	0.0043261	1.808E-06	417.915428932354	30.859	1.0363	30.863	30.535	31.571	0.0037212					64	23	5	0	0	0	0.00029353	5	2071	2049;2059;2071;2084;2097		133.99	77.361	1	2698000			47907	14400	32229	32242	54097;54098;54099;54100;54101	54099					0.10944180170872642
RIFEPPPPK	9	Unmodified	_RIFEPPPPK_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.8140258789062	2	540.813659	1079.61277	0.11952	6.4638E-05	0.36076	0.00019511	0.48028	0.00025974	540.813674930169	34.68	1.5274	34.89	34.065	35.593	0.21002					91	37	3	0	0	0	0.23176	1	2576	2576		70.816	16.094	1	1016600			47908	2468	32230	32243	54102	54102					0.07614326093880663
RIFGLLMG	8	Unmodified	_RIFGLLMG_					0	0	0		ENSG00000100941|ENST00000216832|PNN	ENSG00000100941|ENST00000216832|PNN	ENSG00000100941|ENST00000216832|PNN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.76605224609375	2	453.765123	905.515694	-1.2902	-0.00058543	1.9617	0.00089015	0.67153	0.00030472	453.76607829009424	41.177	0.83587	41.181	40.825	41.661	0.0043983					78	27	4	0	0	0	0.88915	1	2648	2648		35.201	0	1	657720			47909	1888	32231	32244	54103	54103					0.0591564061326153
RIFKDKIVLN	10	Unmodified	_RIFKDKIVLN_					0	0	0			REV__ENSG00000134452|ENST00000362091|FBH1	REV__ENSG00000134452|ENST00000362091|FBH1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	623.3914184570312	2	623.387522	1244.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.78	1	112.76	112.26	113.26	-0.024811								0	0	0	0.45132	1	12468	12468		14.865	3.3539	1		+		47910	19143	32232	32245	54104	54104					0.14790217627887614
RIFKHFTRK	9	Unmodified	_RIFKHFTRK_					0	0	0		ENSG00000027075|ENST00000332981|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.58416748046875	3	411.584008	1231.73019	-0.064664	-2.6615E-05	0.37271	0.0001534	0.30805	0.00012679	411.58409479509044	21.479	1.1219	20.851	20.494	21.616	-0.62834					86	28	4	0	0	0	0.53912	1	803	803		50.034	10.16	1	818940			47911	873	32233	32246	54105	54105					0.12359903753326762
RIFKHFTRK	9	Unmodified	_RIFKHFTRK_					0	0	0		ENSG00000027075|ENST00000332981|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	411.584008	1231.73019	1.5828	0.00065145	-1.2065	-0.00049658	0.37628	0.00015487	411.5834556402397	21.313	1.331	20.869	20.477	21.808	-0.44324	0.0093082	-0.001143	NaN	50.034	86	30	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	766690			47912	873	32233	32246							0.12359903753326762
RIFSAVLRYL	10	Unmodified	_RIFSAVLRYL_					0	0	0			REV__ENSG00000046889|ENST00000288368|PREX2	REV__ENSG00000046889|ENST00000288368|PREX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.3726806640625	2	619.374415	1236.73428	0.60184	0.00037276	-4.1787	-0.0025882	-3.5769	-0.0022154	619.3721424545147	101.51	1.6945	101.55	101.22	102.91	0.044823					109	40	4	0	0	0	0.8651	1	10996	10996		25.574	1.0549	1	2715800	+		47913	16346	32234	32247	54106	54106					0.1253794845642915
RIFSKVKY	8	Unmodified	_RIFSKVKY_					0	0	0		ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-3|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	ENSG00000142661|ENST00000374434|MYOM3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.818603515625	2	520.816202	1039.61785	-0.03517	-1.8317E-05	-4.1006	-0.0021357	-4.1358	-0.002154	521.3161259386087	84.367	0.88947	84.815	84.266	85.155	0.44736					24	21	2	0	0	0	0.4196	1	9887	9887		73.975	0	1	220150			47914	4579	32235	32248	54107	54107					0.09962629956521596
RIGAQQPN	8	Unmodified	_RIGAQQPN_					0	0	0			REV__ENSG00000137975|ENST00000370565|CLCA2	REV__ENSG00000137975|ENST00000370565|CLCA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2407531738281	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.89962	1	7716	7716		38.806	3.1879	1	716910	+		47915	19427	32236	32249	54108	54108					0.021228632976999506
RIGAQQPN	8	Unmodified	_RIGAQQPN_					0	0	0			REV__ENSG00000137975|ENST00000370565|CLCA2	REV__ENSG00000137975|ENST00000370565|CLCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2409362792969	2	442.240858	882.467164	1.1524	0.00050963	-0.96747	-0.00042785	0.18491	8.1777E-05	442.24031897086877	78.91	2.9149	78.962	77.3	80.215	0.051682					176	101	2	0	0	0	0.85277	1	7712	7712		25.45	0	1	354610	+		47916	19427	32236	32249	54109	54109					0.021228632976999506
RIGAQQPN	8	Unmodified	_RIGAQQPN_					0	0	0			REV__ENSG00000137975|ENST00000370565|CLCA2	REV__ENSG00000137975|ENST00000370565|CLCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2408142089844	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.89962	1	8115	8115		38.806	0	1	1244000	+		47917	19427	32236	32249	54110	54110					0.021228632976999506
RIGAQQPN	8	Unmodified	_RIGAQQPN_					0	0	0			REV__ENSG00000137975|ENST00000370565|CLCA2	REV__ENSG00000137975|ENST00000370565|CLCA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.24127197265625	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.87922	1	8067	8067		31.955	0	1	1219900	+		47918	19427	32236	32249	54111	54111					0.021228632976999506
RIGAQQPN	8	Unmodified	_RIGAQQPN_					0	0	0			REV__ENSG00000137975|ENST00000370565|CLCA2	REV__ENSG00000137975|ENST00000370565|CLCA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24163818359375	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.87479	1	7421	7421		30.504	2.6214	1	1094000	+		47919	19427	32236	32249	54112	54112					0.021228632976999506
RIGDVTKK	8	Unmodified	_RIGDVTKK_					0	0	0			REV__ENST00000471660.5_1_3:87276594-87294874:+|nuORF	REV__ENST00000471660.5_1_3:87276594-87294874:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7822570800781	2	458.782359	915.550165	-1.2533	-0.00057499	0.92739	0.00042547	-0.32591	-0.00014952	458.78277385971126	21.037	1.5776	21.082	20.679	22.257	0.045401					194	76	5	0	0	0	0.3289	1	537	537		102.77	0	1	7296300	+		47920	27235	32237	32250	54113	54113					0.08901180025713984
RIGGKYWKV	9	Unmodified	_RIGGKYWKV_					0	0	0		ENSG00000181333|ENST00000315765|HEPHL1	ENSG00000181333|ENST00000315765|HEPHL1	ENSG00000181333|ENST00000315765|HEPHL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8302612304688	2	553.827101	1105.63965	1.7761	0.00098364	3.5243	0.0019519	5.3004	0.0029355	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.78536	1	9278	9278		29.15	3.6994	1	1628400			47921	7382	32238	32251	54114	54114					0.09105434705065818
RIGGQATH	8	Unmodified	_RIGGQATH_					0	0	0		ENST00000519844.1_1_8:101393729-101422965:-|nuORF;ENST00000523870.1_1_8:101393729-101407626:-|nuORF	ENST00000519844.1_1_8:101393729-101422965:-|nuORF	ENST00000519844.1_1_8:101393729-101422965:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22747802734375	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.87479	1	7355	7355		30.504	2.6214	1	419890			47922	13145	32239	32252	54115	54115					0.015265941262214255
RIGGQATH	8	Unmodified	_RIGGQATH_					0	0	0		ENST00000519844.1_1_8:101393729-101422965:-|nuORF;ENST00000523870.1_1_8:101393729-101407626:-|nuORF	ENST00000519844.1_1_8:101393729-101422965:-|nuORF	ENST00000519844.1_1_8:101393729-101422965:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2274475097656	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.88915	1	7669	7669		35.201	4.6971	1	961790			47923	13145	32239	32252	54116	54116					0.015265941262214255
RIGGQATH	8	Unmodified	_RIGGQATH_					0	0	0		ENST00000519844.1_1_8:101393729-101422965:-|nuORF;ENST00000523870.1_1_8:101393729-101407626:-|nuORF	ENST00000519844.1_1_8:101393729-101422965:-|nuORF	ENST00000519844.1_1_8:101393729-101422965:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2265625	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.8347	2	7784	7520;7784		31.955	1.4512	1	831720			47924	13145	32239	32252	54117;54118	54118					0.015265941262214255
RIGGQATH	8	Unmodified	_RIGGQATH_					0	0	0		ENST00000519844.1_1_8:101393729-101422965:-|nuORF;ENST00000523870.1_1_8:101393729-101407626:-|nuORF	ENST00000519844.1_1_8:101393729-101422965:-|nuORF	ENST00000519844.1_1_8:101393729-101422965:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2275085449219	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.87479	1	7319	7319		30.504	0.6621	1	634680			47925	13145	32239	32252	54119	54119					0.015265941262214255
RIGKIQAN	8	Unmodified	_RIGKIQAN_					0	0	0		ENSG00000099290|ENST00000282633|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C	ENSG00000099290|ENST00000282633|WASHC2A	ENSG00000099290|ENST00000282633|WASHC2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2734375	2	450.274701	898.534849	-1.7762	-0.00079979	1.8456	0.00083102	0.069358	3.123E-05	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.87479	2	12174	12124;12174		31.955	6.5047	1	2494900			47926	1753	32240	32253	54120;54121	54121					0.08152313228504227
RIGKNPGQ	8	Unmodified	_RIGKNPGQ_					0	0	0		ENSG00000115232|ENST00000397033|ITGA4;ENST00000478440.1_1_2:182322968-182343489:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;nc|ENSG00000115232|P13612-2|ITGA4;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000465522.5_1_2:182322141-182350724:+|nuORF	ENSG00000115232|ENST00000397033|ITGA4	ENSG00000115232|ENST00000397033|ITGA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2518615722656	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87922	1	7622	7622		31.955	0	1	2823900			47927	2821	32241	32254	54122	54122					0.04839453677379879
RIGKNPGQ	8	Unmodified	_RIGKNPGQ_					0	0	0		ENSG00000115232|ENST00000397033|ITGA4;ENST00000478440.1_1_2:182322968-182343489:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;nc|ENSG00000115232|P13612-2|ITGA4;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000465522.5_1_2:182322141-182350724:+|nuORF	ENSG00000115232|ENST00000397033|ITGA4	ENSG00000115232|ENST00000397033|ITGA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.251708984375	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.884	1	7763	7763		33.516	0	1	3292300			47928	2821	32241	32254	54123	54123					0.04839453677379879
RIGKPVSI	8	Unmodified	_RIGKPVSI_					0	0	0			REV__ENSG00000131379|ENST00000253697|C3orf20	REV__ENSG00000131379|ENST00000253697|C3orf20	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2517395019531	2	435.281995	868.549437	0.25849	0.00011252	-1.853	-0.00080656	-1.5945	-0.00069404	435.28108148205797	80.206	0.9726	80.733	80.105	81.078	0.52676					39	22	2	0	0	0	0.4196	1	9203	9203		35.618	6.4687	1	153510	+		47929	18948	32242	32255	54124	54124					0.10990385376669565
RIGLEVDR	8	Unmodified	_RIGLEVDR_					0	0	0		nc|ENSG00000083896|Q96MU7-2|YTHDC1;ENSG00000083896|ENST00000344157|YTHDC1	nc|ENSG00000083896|Q96MU7-2|YTHDC1	nc|ENSG00000083896|Q96MU7-2|YTHDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2782897949219	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.89494	1	7787	7787		37.159	2.9866	1	2142700			47930	1510	32243	32256	54125	54125					0.06031992020314192
RIGLHSGSVF	10	Unmodified	_RIGLHSGSVF_					0	0	0		nc|ENSG00000164116|Q02108-2|GUCY1A1;ENSG00000164116|ENST00000506455|GUCY1A1	nc|ENSG00000164116|Q02108-2|GUCY1A1	nc|ENSG00000164116|Q02108-2|GUCY1A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7986450195312	2	536.79854	1071.58253	0.13037	6.9984E-05	1.1246	0.0006037	1.255	0.00067368	536.7974000429033	56.942	0.95939	57.497	57.006	57.965	0.55513					55	22	4	0	0	0	0.43769	1	5950	5950		60.972	7.6205	1	1016200			47931	5921	32244	32257	54126	54126					0.04959967428703749
RIGLKKWEKRN	11	Unmodified	_RIGLKKWEKRN_					0	0	0		ENST00000591531.1_1_19:37264270-37264402:+|nuORF	ENST00000591531.1_1_19:37264270-37264402:+|nuORF	ENST00000591531.1_1_19:37264270-37264402:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62420654296875	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.78683	2	12304	12304;12434		14.086	2.1536	1	2577100			47932	14275	32245	32258	54127;54128	54127					0.15574901045056322
RIGLMKKFN	9	Unmodified	_RIGLMKKFN_					0	0	0		chr7:56101861-56104226|18|117.83|0.67|7.46|-|1|CHCHD2,CHCHD2|1;ENST00000395422.3_1_7:56169496-56170576:-|nuORF	chr7:56101861-56104226|18|117.83|0.67|7.46|-|1|CHCHD2,CHCHD2|1	chr7:56101861-56104226|18|117.83|0.67|7.46|-|1|CHCHD2,CHCHD2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.83056640625	2	553.828786	1105.64302	-1.4397	-0.00079733	3.9475	0.0021862	2.5078	0.0013889	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.77546	1	9147	9147		31.955	1.4512	1	5453100			47933	504	32246	32259	54129	54129					0.09442361487435846
RIGQLLPF	8	Unmodified	_RIGQLLPF_					0	0	0			REV__ENSG00000119535|ENST00000373106|CSF3R	REV__ENSG00000119535|ENST00000373106|CSF3R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28753662109375	2	472.28982	942.565087	-1.7052	-0.00080536	-2.8033	-0.001324	-4.5086	-0.0021293	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.86288	1	9885	9885		26.796	0.10319	1	40161000	+		47934	18357	32247	32260	54130	54130					0.0915067189371257
RIGRKVFAKAA	11	Unmodified	_RIGRKVFAKAA_					0	0	0		nc|ENSG00000163945|Q2YD98-2|UVSSA;ENSG00000163945|ENST00000389851|UVSSA	nc|ENSG00000163945|Q2YD98-2|UVSSA	nc|ENSG00000163945|Q2YD98-2|UVSSA	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.26019287109375	3	406.259413	1215.75641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.787	1	56.761	56.261	57.261	-0.026108								0	0	0	0.56276	1	4794	4794		14.086	5.3923	1				47935	5889	32248	32261	54131	54131					0.15716172924862803
RIGRQLSVWLR	11	Unmodified	_RIGRQLSVWLR_					0	0	0		ENST00000260570.7_1_2:27676255-27679405:-|nuORF	ENST00000260570.7_1_2:27676255-27679405:-|nuORF	ENST00000260570.7_1_2:27676255-27679405:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	461.9480895996094	3	461.949239	1382.82589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.88	1	112.91	112.41	113.41	0.028854								0	0	0	0.56276	1	12323	12323		21.032	0.19508	1				47936	9387	32249	32262	54132	54132					0.14978631873577797
RIGSKRKRREE	11	Unmodified	_RIGSKRKRREE_					0	0	0			REV__ENSG00000235703.6,LINC00894,chrX,+,I11.1,149944571,149945347|20|10.75|1|intron	REV__ENSG00000235703.6,LINC00894,chrX,+,I11.1,149944571,149945347|20|10.75|1|intron	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2839660644531	3	472.283169	1413.82768	-0.90644	-0.0004281	0.47648	0.00022503	-0.42996	-0.00020306	472.2829852906886	101.65	1.9803	101.85	100.8	102.78	0.2058					96	48	4	0	0	0	0.77803	1	10664	10664		15.921	0	1	449410	+		47937	23784	32250	32263	54133	54133					0.1373164089156944
RIGTALAQPT	10	Unmodified	_RIGTALAQPT_					0	0	0			REV__ENSG00000188690|ENST00000368797|UROS	REV__ENSG00000188690|ENST00000368797|UROS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.2982788085938	2	514.298373	1026.58219	-0.73299	-0.00037698	1.1638	0.00059853	0.43078	0.00022155	514.2990191535417	96.746	3.1495	96.746	95.529	98.678	0					118	74	2	0	0	0	0.86272	1	9709	9709		24.519	0.99649	1	424760	+		47938	23023	32251	32264	54134	54134					0.0699654770885445
RIGTKTPKS	9	Unmodified	_RIGTKTPKS_					0	0	0		ENSG00000181072|ENST00000680005|CHRM2	ENSG00000181072|ENST00000680005|CHRM2	ENSG00000181072|ENST00000680005|CHRM2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3028259277344	2	494.300916	986.587279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.005	1	15.922	15.422	16.422	-0.083363								0	0	0	0.34932	1	101	101		14.865	0.72775	1				47939	7371	32252	32265	54135	54135					0.09344851571472645
RIGVQLTDSA	10	Unmodified	_RIGVQLTDSA_					0	0	0		ENST00000561050.5_1_14:24566116-24568822:+|nuORF;ENST00000558674.5_1_14:24567646-24569225:+|nuORF;nc|ENSG00000100889|Q16822-2|PCK2;nc|ENSG00000100889|Q16822-3|PCK2;ENSG00000100889|ENST00000216780|PCK2	ENST00000561050.5_1_14:24566116-24568822:+|nuORF	ENST00000561050.5_1_14:24566116-24568822:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.293212890625	2	530.293288	1058.57202	-0.034361	-1.8221E-05	0.31371	0.00016636	0.27935	0.00014814	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.82886	1	9245	9245		37.812	2.6595	1	1852900			47940	1880	32253	32266	54136	54136					0.04507939983614051
RIGVQLTDSA	10	Unmodified	_RIGVQLTDSA_					0	0	0		ENST00000561050.5_1_14:24566116-24568822:+|nuORF;ENST00000558674.5_1_14:24567646-24569225:+|nuORF;nc|ENSG00000100889|Q16822-2|PCK2;nc|ENSG00000100889|Q16822-3|PCK2;ENSG00000100889|ENST00000216780|PCK2	ENST00000561050.5_1_14:24566116-24568822:+|nuORF	ENST00000561050.5_1_14:24566116-24568822:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2932739257812	2	530.293288	1058.57202	-1.2396	-0.00065735	1.1575	0.00061382	-0.082084	-4.3529E-05	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.70553	1	10759	10759		44.377	5.1244	1	1818700			47941	1880	32253	32266	54137	54137					0.04507939983614051
RIHIVTSTPP	10	Unmodified	_RIHIVTSTPP_					0	0	0			REV__ENSG00000142089|ENST00000399808|IFITM3	REV__ENSG00000142089|ENST00000399808|IFITM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8262329101562	2	560.827298	1119.64004	-1.0474	-0.00058741	-0.85113	-0.00047734	-1.8985	-0.0010647	560.8265219498778	50.913	0.64624	50.911	50.705	51.351	-0.0020447					51	20	3	0	0	0	0.86218	1	4327	4327		32.812	0	1	533400	+		47942	19722	32254	32267	54138	54138					0.08500809634256257
RIHLLPYT	8	Unmodified	_RIHLLPYT_					0	0	0			REV__ENST00000309955.7_1_2:202028647-202028731:+|nuORF	REV__ENST00000309955.7_1_2:202028647-202028731:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	507.30218505859375	2	506.800552	1011.58655	0.018043	9.144E-06	1.4105	0.00071482	1.4285	0.00072396	506.80125221893354	53.037	1.9797	53.034	52.291	54.271	-0.0033035					105	54	3	0	0	0	0.80706	1	4743	4743		19.36	0	1	173240	+		47943	24875	32255	32268	54139	54139					0.08122056922411502
RIHLNLVL	8	Unmodified	_RIHLNLVL_					0	0	0			REV__chr13:31137216-31137368|16|48.12|0.67|6.16|-|0|None,HSPH1|1	REV__chr13:31137216-31137368|16|48.12|0.67|6.16|-|0|None,HSPH1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.31390380859375	2	489.316369	976.618185	-1.6498	-0.00080726	-3.082	-0.0015081	-4.7317	-0.0023153	489.3147299207674	95.17	1.9292	95.372	94.862	96.791	0.20242					112	45	5	0	0	0	0.87922	1	9701	9701		31.955	5.1588	1	1907500	+		47944	15563	32256	32269	54140	54140					0.12894049676367558
RIHSGMKPYK	10	Unmodified	_RIHSGMKPYK_					0	0	0		nc|ENSG00000198482|Q8N4W9-2|ZNF808;ENSG00000198482|ENST00000359798|ZNF808	nc|ENSG00000198482|Q8N4W9-2|ZNF808	nc|ENSG00000198482|Q8N4W9-2|ZNF808	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	608.837158203125	2	608.8346	1215.65465	1.1133	0.00067784	3.6864	0.0022444	4.7997	0.0029222	608.836684936877	110.21	0.79676	110.33	110.13	110.93	0.11658					62	26	4	0	0	0	0.85251	1	11882	11882		19.997	0.89325	1	3625100			47945	8276	32257	32270	54141	54141					0.05544558510769093
RIHWESASLLR	11	Unmodified	_RIHWESASLLR_					0	0	0		ENSG00000125730|ENST00000245907|C3	ENSG00000125730|ENST00000245907|C3	ENSG00000125730|ENST00000245907|C3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.5891418457031	3	456.589599	1366.74697	-1.5071	-0.00068814	1.4143	0.00064575	-0.092854	-4.2396E-05	456.59003038213086	47.114	0.87174	47.586	47.175	48.047	0.47139					55	20	4	0	0	0	5.6234E-15	3	4464	4464;4476;4491		166.11	78.394	1	2960600			47946	3409	32258	32271	54142;54143;54144	54142					0.078263598486501
RIHWESASLLR	11	Unmodified	_RIHWESASLLR_					0	0	0		ENSG00000125730|ENST00000245907|C3	ENSG00000125730|ENST00000245907|C3	ENSG00000125730|ENST00000245907|C3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.5891418457031	3	456.589599	1366.74697	-1.0528	-0.00048068	0.89593	0.00040907	-0.15684	-7.1613E-05	456.58985833705674	46.884	1.1872	47.808	47.476	48.663	0.92315					60	28	4	0	0	0	0.00027001	3	4454	4442;4454;4468		134.38	57.843	1	2778000			47947	3409	32258	32271	54145;54146;54147	54146					0.078263598486501
RIIENLVKNLN	11	Unmodified	_RIIENLVKNLN_					0	0	0		ENSG00000169126|ENST00000305242|ODAD2;nc|ENSG00000169126|Q5T2S8-2|ODAD2	ENSG00000169126|ENST00000305242|ODAD2	ENSG00000169126|ENST00000305242|ODAD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.60089111328125	3	442.601504	1324.78268	-0.96202	-0.00042579	0.15349	6.7935E-05	-0.80853	-0.00035786	442.60138371478644	103.97	1.3087	103.97	103.68	104.99	0					72	32	4	0	0	0	0.73277	1	10691	10691		25.892	4.8595	1	296460			47948	6471	32259	32272	54148	54148					0.1332839730566775
RIIHAATN	8	Unmodified	_RIIHAATN_					0	0	0			REV__ENSG00000088756|ENST00000383472|ARHGAP28	REV__ENSG00000088756|ENST00000383472|ARHGAP28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.2587585449219	2	448.259051	894.503549	1.4362	0.00064381	-1.3421	-0.00060159	0.09419	4.2221E-05	448.25829457253	89.934	3.412	89.982	87.811	91.223	0.048157					180	81	5	0	0	0	0.8347	1	9338	9338		23.042	0	1	2959200	+		47949	16945	32260	32273	54149	54149					0.05207740194418875
RIIHETAV	8	Unmodified	_RIIHETAV_					0	0	0		ENSG00000183421|ENST00000332512|RIPK4;nc|ENSG00000183421|P57078|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.7730712890625	2	469.774534	937.534515	0.67124	0.00031533	-3.2272	-0.0015161	-2.556	-0.0012007	469.7728081529732	21.001	0.36928	20.985	20.764	21.133	-0.016428					31	15	3	0	0	0	0.84341	1	533	533		24.203	0	1	130770			47950	7530	32261	32274	54150	54150					0.06324893508644891
RIIIIKAA	8	Unmodified	_RIIIIKAA_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	449.3143615722656	2	449.315838	896.617122	-2.1641	-0.00097236	-0.50993	-0.00022912	-2.674	-0.0012015	449.31543234649376	20.072	0.91752	20.072	19.547	20.465	0					75	43	2	0	0	0	0.81548	1	460	460		20.482	0	1	130470	+		47951	29629	32262	32275	54151	54151					0.1646783530745779
RIIIIKAA	8	Unmodified	_RIIIIKAA_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	449.315838	896.617122	-2.1641	-0.00097236	-0.50993	-0.00022912	-2.674	-0.0012015	449.31543234649376	20.072	0.91752	20.072	19.547	20.465	0	-0.055157	0.0018562	NaN	20.482	75	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130470	+		47952	29629	32262	32275							0.1646783530745779
RIIIIKAA	8	Unmodified	_RIIIIKAA_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	449.315838	896.617122	0.91523	0.00041123	-3.6645	-0.0016465	-2.7493	-0.0012353	449.31402681558393	20.083	0.84957	20.154	19.723	20.572	0.071127	0.026986	-0.0009786	NaN	20.482	56	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94702	+		47953	29629	32262	32275							0.1646783530745779
RIIIIKAA	8	Unmodified	_RIIIIKAA_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	449.315838	896.617122	-0.36219	-0.00016274	-2.3125	-0.001039	-2.6747	-0.0012018	449.3146473601278	20.327	0.92877	20.258	19.828	20.757	-0.069735	0.13009	0.00023641	NaN	20.482	67	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76793	+		47954	29629	32262	32275							0.1646783530745779
RIIIIKAA	8	Unmodified	_RIIIIKAA_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	449.315838	896.617122	1.0976	0.00049319	-3.7178	-0.0016705	-2.6202	-0.0011773	449.3140110440809	20.258	0.9344	20.188	19.943	20.877	-0.070013	0.060843	-0.0010265	NaN	20.482	63	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55064	+		47955	29629	32262	32275							0.1646783530745779
RIIIIKAA	8	Unmodified	_RIIIIKAA_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	449.315838	896.617122	-1.4021	-0.00062997	-1.3472	-0.00060531	-2.7493	-0.0012353	449.3150841537722	20.024	0.67412	20.067	19.864	20.538	0.043747	-0.06016	0.0011038	NaN	20.482	51	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75664	+		47956	29629	32262	32275							0.1646783530745779
RIIIIKAA	8	Unmodified	_RIIIIKAA_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|103|2|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	449.315838	896.617122	0.60616	0.00027236	-3.3457	-0.0015033	-2.7395	-0.0012309	449.3141618354478	20.046	0.62169	20.025	19.713	20.334	-0.020922	-0.1026	-0.00069209	NaN	20.482	53	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80189	+		47957	29629	32262	32275							0.1646783530745779
RIIKKIEEKP	10	Unmodified	_RIIKKIEEKP_					0	0	0			REV__ENSG00000173597|ENST00000310613|SULT1B1	REV__ENSG00000173597|ENST00000310613|SULT1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.60577392578125	3	418.602845	1252.78671	0.27529	0.00011524	4.3507	0.0018212	4.6259	0.0019364	418.604626684704	50.079	2.9767	50.122	47.918	50.895	0.042236					100	78	2	0	0	0	0.85259	1	3839	3839		20.03	0.7678	1	77871	+		47958	21935	32263	32276	54152	54152					0.1704248679934608
RIIKLFRDF	9	Unmodified	_RIIKLFRDF_					0	0	0			REV__nc|ENSG00000181631|Q9BPV8-2|P2RY13	REV__nc|ENSG00000181631|Q9BPV8-2|P2RY13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3667602539062	2	604.369133	1206.72371	-1.2751	-0.00077064	-2.39	-0.0014444	-3.6651	-0.0022151	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.7932	1	12182	12182		11.511	1.2458	1	3346600	+		47959	22469	32264	32277	54153	54153					0.12861965801971564
RIIKRPNLKS	10	Unmodified	_RIIKRPNLKS_					0	0	0			REV__ENST00000581302.5_1_18:21033283-21057068:+|nuORF	REV__ENST00000581302.5_1_18:21033283-21057068:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.93377685546875	3	408.934818	1223.78262	0.012697	5.1924E-06	-2.0601	-0.00084244	-2.0474	-0.00083725	408.933961832912	16.242	0.73024	16.301	16.127	16.857	0.059269					78	32	4	0	0	0	0.85259	1	129	129		20.03	1.4994	1	1215700	+		47960	29047	32265	32278	54154	54154					0.17968442096298531
RIIKVLFTIFL	11	Unmodified	_RIIKVLFTIFL_					0	0	0		ENSG00000176495|ENST00000641998|OR5AN1	ENSG00000176495|ENST00000641998|OR5AN1	ENSG00000176495|ENST00000641998|OR5AN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.9660949707031	3	454.967236	1361.87988	-0.85763	-0.00039019	0.024217	1.1018E-05	-0.83341	-0.00037918	454.96706899495365	41.367	1.3426	41.373	40.948	42.29	0.0065727					90	33	4	0	0	0	0.8498	1	3042	3042		6.001	0.85868	1	458770			47961	7085	32266	32279	54155	54155					0.2134141125259248
RIILNHDAR	9	Unmodified	_RIILNHDAR_					0	0	0			REV__nc|ENSG00000156687|Q6UXZ4-2|UNC5D	REV__nc|ENSG00000156687|Q6UXZ4-2|UNC5D	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3342895507812	2	554.322714	1106.63087	-0.72624	-0.00040257	-0.173	-9.5896E-05	-0.89923	-0.00049846	554.3227223010464	82.957	1.6544	82.957	82.077	83.732	0					69	41	2	0	0	0	0.20789	1	7806	7806		29.15	0	1	47045	+		47962	20502	32267	32280	54156	54156					0.0818246106857714
RIIPKIMPEK	10	Unmodified	_RIIPKIMPEK_					0	0	0		nc|ENSG00000171483|Q7RTT6|SSX6P	nc|ENSG00000171483|Q7RTT6|SSX6P	nc|ENSG00000171483|Q7RTT6|SSX6P	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	409.25689697265625	3	408.921409	1223.7424	-0.96203	-0.00039339	3.0371	0.0012419	2.075	0.00084852	408.92267652699474	104.87	3.639	104.87	103.29	106.93	0					182	86	5	0	0	0	0.8651	1	10835	10835		18.531	2.5243	1	1119800			47963	15093	32268	32281	54157	54157					0.13947759381517244
RIIQNGAIFQ	10	Unmodified	_RIIQNGAIFQ_					0	0	0		ENSG00000133216|ENST00000374630|EPHB2;nc|ENSG00000133216|P29323-3|EPHB2;nc|ENSG00000133216|P29323|EPHB2	ENSG00000133216|ENST00000374630|EPHB2	ENSG00000133216|ENST00000374630|EPHB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.3322143554688	2	580.332747	1158.65094	0.57992	0.00033655	-0.80327	-0.00046616	-0.22335	-0.00012961	580.33221961555	39.911	0.8952	39.917	39.495	40.39	0.0065002					58	22	4	0	0	0	0.51302	1	2500	2500		54.776	0.053964	1	1007900			47964	3866	32269	32282	54158	54158					0.07796212008565817
RIIQQSIVSA	10	Unmodified	_RIIQQSIVSA_					0	0	0			REV__nc|ENSG00000062194|Q86WP2-4|GPBP1	REV__nc|ENSG00000062194|Q86WP2-4|GPBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.8302612304688	2	557.83258	1113.65061	-0.9931	-0.00055398	-2.1796	-0.0012158	-3.1727	-0.0017698	557.83140422783	101.17	1.502	101.2	100.79	102.29	0.031036					74	35	3	0	0	0	0.86763	1	10799	10799		26.693	1.1189	1	902020	+		47965	16460	32270	32283	54159	54159					0.09832792288693781
RIIYTYSLIVL	11	Unmodified	_RIIYTYSLIVL_					0	0	0			REV__ENSG00000185821|ENST00000328314|OR6C76	REV__ENSG00000185821|ENST00000328314|OR6C76	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9429626464844	3	451.942868	1352.80677	-0.094243	-4.2593E-05	1.2047	0.00054444	1.1104	0.00050185	451.9433078192179	55.499	2.0176	55.489	54.191	56.208	-0.010136					136	62	4	0	0	0	0.76892	1	4913	4913		17.833	1.8264	1	381010	+		47966	22797	32271	32284	54160	54160					0.1444823773929329
RIKGSRAVPL	10	Unmodified	_RIKGSRAVPL_					0	0	0			REV__ENST00000372521.8_1_1:43282239-43282911:-|nuORF	REV__ENST00000372521.8_1_1:43282239-43282911:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.8555297851562	2	548.851107	1095.68766	-1.5484	-0.00084986	4.449	0.0024418	2.9005	0.001592	548.8534163902094	40.343	1.3609	40.932	40.303	41.664	0.58915					102	36	4	0	0	0	0.85466	1	3478	3478		20.947	0.95016	1	5413900	+		47967	25721	32272	32285	54161	54161					0.14364508625112649
RIKHPVLKLI	10	Unmodified	_RIKHPVLKLI_					0	0	0		ENST00000396307.6_1_15:55497313-55497613:-|nuORF	ENST00000396307.6_1_15:55497313-55497613:-|nuORF	ENST00000396307.6_1_15:55497313-55497613:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7850646972656	3	406.279926	1215.81795	0.13197	5.3616E-05	2.3524	0.00095571	2.4843	0.0010093	406.61523560426883	33.999	0.10923	34.107	34.06	34.169	0.10829					5	4	2	0	0	0	0.37624	1	1693	1693		7.8045	0	1	20431			47968	11114	32273	32286	54162	54162					0.21867104624107014
RIKIQGATG	9	Unmodified	_RIKIQGATG_					0	0	0		nc|ENSG00000170471|Q86X10-2|RALGAPB;nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB	nc|ENSG00000170471|Q86X10-2|RALGAPB	nc|ENSG00000170471|Q86X10-2|RALGAPB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2887268066406	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.78536	1	12447	12447		29.15	3.6994	1	3080300			47969	6595	32274	32287	54163	54163					0.0874858239999412
RIKKLTPNHT	10	Unmodified	_RIKKLTPNHT_					0	0	0		L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3668212890625	2	604.367121	1206.71969	-1.2751	-0.0007706	0.20453	0.00012361	-1.0705	-0.00064699	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.86698	1	11349	11349		28.081	1.0342	1	103250000			47970	14675	32275	32288	54164	54164					0.12459876308230378
RIKKVLDPSIA	11	Unmodified	_RIKKVLDPSIA_					0	0	0			REV__ENSG00000204610|ENST00000376694|TRIM15	REV__ENSG00000204610|ENST00000376694|TRIM15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9327697753906	3	413.930962	1238.77106	0.21387	8.8526E-05	4.0224	0.001665	4.2363	0.0017535	413.93255960283653	42.979	1.989	43.044	42.116	44.105	0.065033					113	52	3	0	0	0	0.76579	1	3068	3068		18.531	1.3643	1	432840	+		47971	23509	32276	32289	54165	54165					0.1612220028232514
RIKKWVSKQIM	11	Unmodified	_RIKKWVSKQIM_					0	0	0			REV__ENST00000438107.1_1_X:3785229-3785337:-|nuORF	REV__ENST00000438107.1_1_X:3785229-3785337:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.9578857421875	3	472.955113	1415.84351	0.74005	0.00035001	4.3826	0.0020728	5.1227	0.0024228	472.9572235267456	34.131	1.5761	34.341	33.44	35.016	0.21002					95	37	4	0	0	0	0.75121	1	2511	2511		21.78	2.1535	1	2079600	+		47972	26718	32277	32290	54166	54166					0.15222211084233095
RIKKYGAF	8	Unmodified	_RIKKYGAF_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957458496094	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.86791	1	4630	4630		28.254	0.37203	1	1759500			47973	959	32278	32291	54167	54167					0.08446074267988024
RIKLAPGL	8	Unmodified	_RIKLAPGL_					0	0	0			REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.2923583984375	2	434.292362	866.570172	-1.5915	-0.00069117	1.699	0.00073787	0.10753	4.6698E-05	434.2929791362948	74.024	0.92229	74.151	73.732	74.655	0.1271					69	37	2	0	0	0	0.81548	3	6828	6810;6817;6828		28.254	1.4582	1	1163100	+		47974	22929	32279	32292	54168;54169;54170	54170					0.13154975756322074
RIKLAPGL	8	Unmodified	_RIKLAPGL_					0	0	0			REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	REV__nc|ENSG00000187634|Q96NU1-6|SAMD11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.2925109863281	2	434.292362	866.570172	-1.3365	-0.00058044	1.4956	0.00064951	0.15904	6.9069E-05	434.2928799544304	74.19	1.0466	74.276	73.895	74.942	0.085907					77	42	2	0	0	0	0.81548	2	6836	6810;6836		35.201	6.9464	1	1072300	+		47975	22929	32279	32292	54171;54172	54172					0.13154975756322074
RIKNLIKKGRH	11	Unmodified	_RIKNLIKKGRH_					0	0	0			REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|32|1|sense	REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|32|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.96502685546875	3	454.965	1361.87317	-1.4336	-0.00065226	4.0752	0.0018541	2.6416	0.0012018	454.9667637640074	40.21	1.0197	40.799	40.26	41.28	0.58915					78	26	4	0	0	0	0.79224	1	3447	3447		12.957	3.3113	1	11642000	+		47976	29485	32280	32293	54173	54173					0.20670911144566162
RIKNVIQTRNN	11	Unmodified	_RIKNVIQTRNN_					0	0	0		ENST00000202816.5_1_20:13763760-13765473:-|nuORF	ENST00000202816.5_1_20:13763760-13765473:-|nuORF	ENST00000202816.5_1_20:13763760-13765473:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9322814941406	3	452.600386	1354.77933	0.74253	0.00033607	1.6088	0.00072814	2.3513	0.0010642	452.60109668300953	99.182	0.78294	99.338	99.074	99.857	0.15659					29	18	2	0	0	0	0.1767	1	10366	10366		13.508	3.3634	1	135850			47977	9096	32281	32294	54174	54174					0.11613147251659939
RIKPIRPLE	9	Unmodified	_RIKPIRPLE_					0	0	0			REV__nc|ENSG00000070047|Q9P1Y6-2|PHRF1	REV__nc|ENSG00000070047|Q9P1Y6-2|PHRF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3629760742188	2	561.361308	1120.70806	-0.061787	-3.4685E-05	3.5032	0.0019666	3.4414	0.0019319	561.3631099932169	44.376	1.0511	44.826	44.16	45.211	0.45024					79	25	4	0	0	0	0.7932	1	4040	4040		21.96	2.5999	1	3514300	+		47978	16594	32282	32295	54175	54175					0.15253679284933241
RIKQPTVKL	9	Unmodified	_RIKQPTVKL_					0	0	0		ENSG00000107742|ENST00000373109|SPOCK2	ENSG00000107742|ENST00000373109|SPOCK2	ENSG00000107742|ENST00000373109|SPOCK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.8551025390625	2	541.855858	1081.69716	0.15153	8.2105E-05	0.49112	0.00026612	0.64265	0.00034822	541.8555874036251	29.435	0.60128	29.346	29.148	29.749	-0.089544					31	13	3	0	0	0	0.58668	1	1871	1871		47.657	5.2612	1	222210			47979	2364	32283	32296	54176	54176					0.15958276910646418
RIKQQAQALR	10	Unmodified	_RIKQQAQALR_					0	0	0			REV__ENSG00000166813|ENST00000394412|KIF7	REV__ENSG00000166813|ENST00000394412|KIF7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.58197021484375	3	404.582556	1210.72584	2.5442	0.0010293	-2.1363	-0.00086432	0.40789	0.00016503	404.5815915077912	30.915	0.71748	30.904	30.626	31.344	-0.010656					46	17	3	0	0	0	0.8608	1	1650	1650		38.754	2.3069	1	137840	+		47980	21322	32284	32297	54177	54177					0.12890394539772387
RIKRLTTVF	9	Unmodified	_RIKRLTTVF_					0	0	0			REV__ENST00000484502.1_1_7:140706232-140714400:-|nuORF	REV__ENST00000484502.1_1_7:140706232-140714400:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.363037109375	2	567.361308	1132.70806	0.20972	0.00011899	3.6746	0.0020848	3.8843	0.0022038	567.3632440181018	44.63	2.2677	44.626	43.93	46.198	-0.0041618					153	53	5	0	0	0	0.71772	5	3517	3461;3494;3505;3517;3529		39.253	15.05	1	2377000	+		47981	26042	32285	32298	54178;54179;54180;54181;54182	54181					0.1470167928491719
RIKRLTTVF	9	Unmodified	_RIKRLTTVF_					0	0	0			REV__ENST00000484502.1_1_7:140706232-140714400:-|nuORF	REV__ENST00000484502.1_1_7:140706232-140714400:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3633422851562	2	567.361308	1132.70806	0.15466	8.7749E-05	3.9039	0.0022149	4.0585	0.0023027	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.7932	2	3076	3076;3120		26.693	7.5894	1	1937600	+		47982	26042	32285	32298	54183;54184	54183					0.1470167928491719
RIKRLTTVF	9	Unmodified	_RIKRLTTVF_					0	0	0			REV__ENST00000484502.1_1_7:140706232-140714400:-|nuORF	REV__ENST00000484502.1_1_7:140706232-140714400:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3627319335938	2	567.361308	1132.70806	-0.94241	-0.00053469	4.2694	0.0024223	3.327	0.0018876	567.3637060270148	42.168	1.9304	42.865	42.418	44.348	0.69754					144	47	5	0	0	0	0.76764	1	3733	3733		34.173	3.6689	1	16501000	+		47983	26042	32285	32298	54185	54185					0.1470167928491719
RIKSNQISK	9	Unmodified	_RIKSNQISK_					0	0	0		ENSG00000139146|ENST00000337682|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.32421875	2	537.324922	1072.63529	0.36209	0.00019456	-0.9218	-0.00049531	-0.55971	-0.00030075	537.3246028197666	17.224	0.45142	16.741	16.493	16.944	-0.48256					24	9	4	0	0	0	0.2083	1	228	228		72.879	14.649	1	493480			47984	4348	32286	32299	54186	54186					0.10187925491504757
RIKSREDVS	9	Unmodified	_RIKSREDVS_					0	0	0		ENSG00000027075|ENST00000332981|PRKCH;ENST00000556245.1_1_14:62011269-62016546:+|nuORF;nc|ENSG00000027075|P24723-2|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	ENSG00000027075|ENST00000332981|PRKCH	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3042602539062	2	545.304187	1088.59382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.022	1	25.022	24.522	25.522	0								0	0	0	0.29134	1	887	887		34.173	1.3601	1				47985	873	32287	32300	54187	54187					0.05306744732183688
RIKSTHHKL	9	Unmodified	_RIKSTHHKL_					0	0	0			REV__nc|ENSG00000291154|O95744|PMS2P2	REV__nc|ENSG00000291154|O95744|PMS2P2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3401489257812	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.77244	5	11012	11012;11036;11084;11227;11288		32.812	4.7309	1	81463000	+		47986	30303	32288	32301	54188;54189;54190;54191;54192	54188					0.11267337965296065
RIKSTHHKL	9	Unmodified	_RIKSTHHKL_					0	0	0			REV__nc|ENSG00000291154|O95744|PMS2P2	REV__nc|ENSG00000291154|O95744|PMS2P2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3400268554688	2	560.340907	1118.66726	0.86176	0.00048288	-2.22	-0.001244	-1.3582	-0.00076107	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.76764	7	10703	10703;10810;10822;10858;10996;11090;11150		34.173	4.9302	1	126390000	+		47987	30303	32288	32301	54193;54194;54195;54196;54197;54198;54199	54193					0.11267337965296065
RIKSTHHKL	9	Unmodified	_RIKSTHHKL_					0	0	0			REV__nc|ENSG00000291154|O95744|PMS2P2	REV__nc|ENSG00000291154|O95744|PMS2P2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3401489257812	2	560.340907	1118.66726	-1.4185	-0.00079484	0.46581	0.00026101	-0.95269	-0.00053383	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.78983	2	12702	12604;12702		27.882	1.1893	1	4071000	+		47988	30303	32288	32301	54200;54201	54201					0.11267337965296065
RIKSVVLVILL	11	Unmodified	_RIKSVVLVILL_					0	0	0		ENSG00000212124|ENST00000390673|TAS2R19	ENSG00000212124|ENST00000390673|TAS2R19	ENSG00000212124|ENST00000390673|TAS2R19	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2979736328125	3	418.295353	1251.86423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.46	1	75.855	75.355	76.355	0.39507								0	0	0	0.56276	1	8535	8535		6.001	1.6622	1				47989	8568	32289	32302	54202	54202					0.2483712473556352
RIKTKQPVELN	11	Unmodified	_RIKTKQPVELN_					0	0	0			REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|36|3|sense	REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|36|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.59991455078125	3	442.601504	1324.78268	-0.96202	-0.00042579	0.15349	6.7935E-05	-0.80853	-0.00035786	442.60138371478644	103.97	1.3087	103.97	103.68	104.99	0					72	32	4	0	0	0	0.72374	1	10724	10724		27.644	0.89421	1	296460	+		47990	29480	32290	32303	54203	54203					0.1332839730566775
RIKTKQPVELN	11	Unmodified	_RIKTKQPVELN_					0	0	0			REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|36|3|sense	REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|36|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	442.601504	1324.78268	-1.3791	-0.0006104	0.26674	0.00011806	-1.1124	-0.00049234	442.6015585070328	103.47	0.96249	103.65	103.39	104.36	0.18297	-0.125	0.0027357	NaN	27.644	56	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	395550	+		47991	29480	32290	32303							0.1332839730566775
RIKTKQPVELN	11	Unmodified	_RIKTKQPVELN_					0	0	0			REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|36|3|sense	REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|36|3|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	442.601504	1324.78268	-1.7993	-0.00079636	0.73998	0.00032751	-1.0593	-0.00046885	442.60173259233267	103.61	0.91519	103.73	103.42	104.34	0.11494	-0.050251	0.003364	NaN	27.644	42	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	297600	+		47992	29480	32290	32303							0.1332839730566775
RIKTKQPVELN	11	Unmodified	_RIKTKQPVELN_					0	0	0			REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|36|3|sense	REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|36|3|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	442.601504	1324.78268	1.316	0.00058247	-2.4827	-0.0010988	-1.1667	-0.00051638	442.6002884471727	103.42	0.61937	103.65	103.42	104.04	0.22556	-0.12974	-0.00091506	NaN	27.644	16	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	193370	+		47993	29480	32290	32303							0.1332839730566775
RIKTLRRCY	9	Unmodified	_RIKTLRRCY_					0	0	0		ENSG00000120458|ENST00000374979|MSANTD2	ENSG00000120458|ENST00000374979|MSANTD2	ENSG00000120458|ENST00000374979|MSANTD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57489013671875	3	403.573003	1207.69718	-0.15272	-6.1634E-05	4.205	0.001697	4.0523	0.0016354	403.57482141632175	80.779	1.0749	81.306	80.78	81.855	0.52676					103	25	6	0	0	0	0.7423	1	9346	9346		37.508	4.4688	1	21414000			47994	3131	32291	32304	54204	54204					0.10163953639016654
RILARQVCHL	10	Unmodified	_RILARQVCHL_					0	0	0			REV__nc|ENSG00000153487|Q9UK53-3|ING1	REV__nc|ENSG00000153487|Q9UK53-3|ING1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8585205078125	2	604.855867	1207.69718	0.22273	0.00013472	4.2582	0.0025756	4.481	0.0027103	604.8583327420461	82.105	1.1205	82.531	81.753	82.873	0.42645					96	27	4	0	0	0	0.78666	1	9501	9501		35.618	12.096	1	3330300	+		47995	20349	32292	32305	54205	54205					0.10163953638993917
RILARQVCHL	10	Unmodified	_RILARQVCHL_					0	0	0			REV__nc|ENSG00000153487|Q9UK53-3|ING1	REV__nc|ENSG00000153487|Q9UK53-3|ING1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.858154296875	2	604.855867	1207.69718	0.082073	4.9642E-05	4.3287	0.0026183	4.4108	0.0026679	604.8584757159402	82.084	1.3276	82.558	81.718	83.045	0.47383					56	29	2	0	0	0	0.5442	1	9557	9557		49.442	1.7842	1	3105600	+		47996	20349	32292	32305	54206	54206					0.10163953638993917
RILDVART	8	Unmodified	_RILDVART_					0	0	0			REV__ENST00000588511.5_1_19:13223619-13226880:-|nuORF	REV__ENST00000588511.5_1_19:13223619-13226880:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2872314453125	2	472.287808	942.561064	-1.7052	-0.00080535	2.0866	0.00098547	0.38138	0.00018012	472.2887688366916	99.113	1.9296	99.299	98.808	100.74	0.18582					95	44	3	0	0	0	0.86677	1	10280	10280		27.882	1.1893	1	583920	+		47997	17488	32293	32306	54207	54207					0.08748582399982752
RILFFNTPK	9	Unmodified	_RILFFNTPK_					0	0	0		ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.3338012695312	2	568.334759	1134.65496	0.1346	7.6501E-05	-0.16142	-9.174E-05	-0.026814	-1.5239E-05	568.3345603716866	53.12	0.82681	53.534	53.209	54.036	0.4139					45	19	4	0	0	0	0.039957	3	5341	5341;5352;5364		112.41	44.917	1	1244100			47998	1760	32294	32307	54208;54209;54210	54208					0.09302301502248156
RILFFNTPK	9	Unmodified	_RILFFNTPK_					0	0	0		ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.3340454101562	2	568.334759	1134.65496	0.70405	0.00040014	-0.66015	-0.00037518	0.043906	2.4953E-05	568.3342850685762	52.838	0.66032	53.452	53.2	53.86	0.61436					40	15	4	0	0	0	0.11055	1	5343	5343		90.37	26.836	1	1352400			47999	1760	32294	32307	54211	54211					0.09302301502248156
RILFPGGG	8	Unmodified	_RILFPGGG_					0	0	0		ENST00000483271.1_1_1:246784923-246797226:+|nuORF	ENST00000483271.1_1_1:246784923-246797226:+|nuORF	ENST00000483271.1_1_1:246784923-246797226:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.73944091796875	2	408.739963	815.465373	-1.9104	-0.00078087	1.2072	0.00049344	-0.70323	-0.00028744	408.7403172425698	35.43	2.8133	35.461	35.232	38.045	0.031132					176	81	3	0	0	0	0.80963	1	2045	2045		15.636	0	1	1364200			48000	12507	32295	32308	54212	54212					0.050258542797678274
RILGPGLNK	9	Unmodified	_RILGPGLNK_					0	0	0		ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF	ENST00000472730.1_1_3:61728131-61728755:-|nuORF	ENST00000472730.1_1_3:61728131-61728755:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.306640625	2	484.306001	966.597449	-0.18342	-8.8831E-05	0.25659	0.00012427	0.073176	3.544E-05	484.3059108174794	31.955	0.42864	32.082	31.86	32.289	0.12642					24	9	3	0	0	0	0.38563	1	2199	2199		58.782	3.2778	1	289130			48001	12268	32296	32309	54213	54213					0.11281459296708363
RILGPGLNK	9	Unmodified	_RILGPGLNK_					0	0	0		ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF	ENST00000472730.1_1_3:61728131-61728755:-|nuORF	ENST00000472730.1_1_3:61728131-61728755:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.30621337890625	2	484.306001	966.597449	0.22608	0.00010949	-0.43109	-0.00020878	-0.20502	-9.9292E-05	484.30564451882566	31.894	0.47249	32.001	31.717	32.189	0.10707					27	10	3	0	0	0	0.25483	1	2211	2211		68.787	5.4806	1	368050			48002	12268	32296	32309	54214	54214					0.11281459296708363
RILHLLLRRY	10	Unmodified	_RILHLLLRRY_					0	0	0		ENST00000424919.1_1_X:150162237-150162561:+|nuORF	ENST00000424919.1_1_X:150162237-150162561:+|nuORF	ENST00000424919.1_1_X:150162237-150162561:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9578552246094	3	451.626096	1351.85646	-1.8035	-0.00081452	-1.8602	-0.0008401	-3.6637	-0.0016546	451.6251108617355	45.416	1.0919	45.416	44.809	45.901	0					45	26	2	0	0	0	0.85633	1	3385	3385		21.686	4.519	1	78079			48003	11523	32297	32310	54215	54215					0.19460410258625416
RILHLLTQEA	10	Unmodified	_RILHLLTQEA_					0	0	0		ENSG00000059573|ENST00000371224|ALDH18A1;nc|ENSG00000059573|P54886-2|ALDH18A1	ENSG00000059573|ENST00000371224|ALDH18A1	ENSG00000059573|ENST00000371224|ALDH18A1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3577270507812	2	597.35368	1192.69281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.172	1	93.613	93.113	94.113	0.44099								0	0	0	0.45132	1	11096	11096		37.812	1.3648	1				48004	1053	32298	32311	54216	54216					0.10416767697097384
RILHTAAN	8	Unmodified	_RILHTAAN_					0	0	0			REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.2582702636719	2	448.259051	894.503549	1.3621	0.00061059	-1.0199	-0.00045716	0.34228	0.00015343	448.2583183287722	90.104	3.5316	90.034	88.323	91.855	-0.069977					211	84	5	0	0	0	0.89494	1	9493	9493		37.159	0	1	2982200	+		48005	29996	32299	32312	54217	54217					0.05207740194418875
RILKFLKLFI	10	Unmodified	_RILKFLKLFI_					0	0	0		ENST00000546531.5_1_12:49396684-49399341:-|nuORF;nc|ENSG00000181929|P54619-2|PRKAG1;ENSG00000181929|ENST00000548065|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1	ENST00000546531.5_1_12:49396684-49399341:-|nuORF	ENST00000546531.5_1_12:49396684-49399341:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.9606018066406	3	430.960193	1289.85875	-1.3804	-0.0005949	1.9801	0.00085335	0.59969	0.00025844	430.960928295924	39.883	1.7352	40.251	38.964	40.699	0.36797					162	41	5	0	0	0	0.90881	1	3381	3381		7.8045	1.4836	1	5466100			48006	7415	32300	32313	54218	54218					0.22541445943716099
RILKKARKGRH	11	Unmodified	_RILKKARKGRH_					0	0	0		ENST00000506560.5_1_4:83852219-83852264:-|nuORF	ENST00000506560.5_1_4:83852219-83852264:-|nuORF	ENST00000506560.5_1_4:83852219-83852264:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.9662780761719	3	454.968745	1361.8844	-1.2289	-0.00055911	-2.9632	-0.0013482	-4.1921	-0.0019073	454.9672058394649	41.291	1.22	41.25	40.922	42.142	-0.040806					93	31	4	0	0	0	0.80593	1	3116	3116		10.104	0.45776	1	820870			48007	12938	32301	32314	54219	54219					0.2179373323872369
RILKQPITLQ	10	Unmodified	_RILKQPITLQ_					0	0	0		chr4:56505693-56523697|34|10.71|0.01|10.37|+|1|None,ARL9|1;chr4:56505509-56523697|23|12.39|0.02|9.31|+|1|ARL9,ARL9|1	chr4:56505693-56523697|34|10.71|0.01|10.37|+|1|None,ARL9|1	chr4:56505693-56523697|34|10.71|0.01|10.37|+|1|None,ARL9|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9295959472656	3	403.92744	1208.76049	2.3249	0.0009391	3.1739	0.001282	5.4989	0.0022211	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.888	1	3958	3958		11.097	0.50996	1	2948200			48008	426	32302	32315	54220	54220					0.16446217627890292
RILPKPTRK	9	Unmodified	_RILPKPTRK_					0	0	0		chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2;ENST00000444127.1_1_1:68708159-68708657:-|nuORF;ENSG00000171863|ENST00000645674|RPS7	chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.869384765625	2	554.8693	1107.72405	0.57286	0.00031786	-0.40692	-0.00022579	0.16594	9.2073E-05	554.8689840832363	19.886	0.70171	19.416	19.065	19.767	-0.46967					34	14	3	0	0	0	0.7932	1	566	566		26.693	1.1189	1	410780			48009	333	32303	32316	54221	54221					0.17449385521831573
RILPKPTRK	9	Unmodified	_RILPKPTRK_					0	0	0		chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2;ENST00000444127.1_1_1:68708159-68708657:-|nuORF;ENSG00000171863|ENST00000645674|RPS7	chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	chr2:3577428-3577710|32|25.91|0.02|10.49|+|0|None,RPS7|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.8693237304688	2	554.8693	1107.72405	-0.0075547	-4.1919E-06	0.17005	9.4357E-05	0.1625	9.0166E-05	554.8692814582408	20.007	0.64329	19.378	19.075	19.718	-0.62961					31	13	3	0	0	0	0.71772	2	603	582;603		39.253	10.103	1	548660			48010	333	32303	32316	54222;54223	54223					0.17449385521831573
RILQFRLYKKK	11	Unmodified	_RILQFRLYKKK_					0	0	0		ENSG00000184156|ENST00000388996|KCNQ3;ENST00000519589.1_1_8:133141511-133152462:-|nuORF;nc|ENSG00000184156|O43525-2|KCNQ3	ENSG00000184156|ENST00000388996|KCNQ3	ENSG00000184156|ENST00000388996|KCNQ3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.6577453613281	3	498.320672	1491.94019	-0.30203	-0.00015051	2.9552	0.0014726	2.6532	0.0013221	498.3219797483675	50.891	1.0872	50.799	50.377	51.464	-0.091793					78	30	4	0	0	0	0.81021	1	4011	4011		9.2118	3.2108	1	376330			48011	7582	32304	32317	54224	54224					0.21389521635660458
RILSGVVTK	9	Unmodified	_RILSGVVTK_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.8133850097656	2	486.813659	971.612765	-0.21818	-0.00010621	-0.20428	-9.9448E-05	-0.42247	-0.00020566	486.8134859363653	32.309	0.98692	32.435	32.073	33.06	0.12642					70	22	5	0	0	0	0.059135	1	2245	2245		104.06	2.4561	1	4653700			48012	4568	32305	32318	54225	54225					0.12582326093900065
RILSGVVTK	9	Unmodified	_RILSGVVTK_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.81341552734375	2	486.813659	971.612765	0.56917	0.00027708	-0.99852	-0.00048609	-0.42935	-0.00020901	486.8131194278926	32.26	1.0233	32.367	32.016	33.04	0.10707					72	23	5	0	0	0	0.026876	3	2281	2245;2257;2281		120.31	24.116	1	4982000			48013	4568	32305	32318	54226;54227;54228	54228					0.12582326093900065
RILSRDKKVL	10	Unmodified	_RILSRDKKVL_					0	0	0		nc|ENSG00000111785|Q9NVN3-3|RIC8B;nc|ENSG00000111785|Q9NVN3|RIC8B;nc|ENSG00000111785|Q9NVN3-1|RIC8B;ENSG00000111785|ENST00000392837|RIC8B	nc|ENSG00000111785|Q9NVN3-3|RIC8B	nc|ENSG00000111785|Q9NVN3-3|RIC8B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2923278808594	3	409.934706	1226.78229	-0.028036	-1.1493E-05	0.74967	0.00030731	0.72163	0.00029582	409.93488566927056	20.669	0.53445	20.04	19.718	20.253	-0.6296					22	11	3	0	0	0	0.37624	1	656	656		20.03	0.7678	1	61493			48014	2612	32306	32319	54229	54229					0.17797022376453242
RILSYTTN	8	Unmodified	_RILSYTTN_					0	0	0		ENST00000485901.1_1_6:32974617-32975137:-|nuORF	ENST00000485901.1_1_6:32974617-32975137:-|nuORF	ENST00000485901.1_1_6:32974617-32975137:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.64593505859375	2	484.263999	966.513445	-0.72466	-0.00035093	1.2369	0.00059897	0.5122	0.00024804	484.2644270654109	47.66	0.61744	47.634	47.175	47.792	-0.026737					32	21	2	0	0	0	0.4196	1	3928	3928		44.117	0	1	272370			48015	12569	32307	32320	54230	54230					0.028848834091263598
RILVFDPKLSR	11	Unmodified	_RILVFDPKLSR_					0	0	0			REV__nc|ENSG00000008056|P17600-2|SYN1	REV__nc|ENSG00000008056|P17600-2|SYN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.609130859375	3	448.610111	1342.8085	-1.3368	-0.0005997	-0.31575	-0.00014165	-1.6525	-0.00074135	448.60975879741926	77.285	1.2875	77.285	77.023	78.311	0					128	61	3	0	0	0	0.74405	1	7075	7075		23.378	2.5408	1	598490	+		48016	16127	32308	32321	54231	54231					0.15081291547926412
RILVFDPKLSR	11	Unmodified	_RILVFDPKLSR_					0	0	0			REV__nc|ENSG00000008056|P17600-2|SYN1	REV__nc|ENSG00000008056|P17600-2|SYN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.9433288574219	3	448.610111	1342.8085	-0.14494	-6.5021E-05	-1.758	-0.00078864	-1.9029	-0.00085366	448.9437169224278	77.071	0.84238	77.124	76.655	77.498	0.052704					75	41	2	0	0	0	0.78391	1	7445	7445		14.694	0.60766	1	780830	+		48017	16127	32308	32321	54232	54232					0.15081291547926412
RILYYKLVEDI	11	Unmodified	_RILYYKLVEDI_					0	0	0			REV__ENSG00000138315|ENST00000334011|OIT3	REV__ENSG00000138315|ENST00000334011|OIT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	475.6081237792969	3	475.609777	1423.8075	-1.171	-0.00055696	-1.5356	-0.00073034	-2.7066	-0.0012873	475.6088239953205	51.667	0.52666	51.68	51.398	51.925	0.01244					30	12	3	0	0	0	0.76251	1	4467	4467		19.263	5.1767	1	155360	+		48018	19456	32309	32322	54233	54233					0.11255032388362451
RIMRSLSLPPR	11	Unmodified	_RIMRSLSLPPR_					0	0	0			REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.59942626953125	3	442.599329	1324.77616	0.94149	0.00041671	-0.54781	-0.00024246	0.39369	0.00017425	442.59892389076134	48.942	1.6202	48.942	48.276	49.896	0.00016785					103	36	4	0	0	0	0.67762	1	4098	4098		35.178	0	1	343460	+		48019	16469	32310	32323	54234	54234					0.12676180873268095
RINAEIVAVVK	11	Unmodified	_RINAEIVAVVK_					0	0	0			REV__ENSG00000125962|ENST00000473968|ARMCX5	REV__ENSG00000125962|ENST00000473968|ARMCX5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.58843994140625	3	404.587195	1210.73976	-0.70688	-0.000286	3.8208	0.0015458	3.1139	0.0012598	404.5885895770404	40.363	0.86463	40.755	40.337	41.202	0.39209					67	23	4	0	0	0	0.73647	1	3425	3425		25.068	1.5451	1	1603300	+		48020	18685	32311	32324	54235	54235					0.14281627248215045
RINNFDTIK	9	Unmodified	_RINNFDTIK_					0	0	0			REV__ENSG00000257743|ENST00000477922|MGAM2	REV__ENSG00000257743|ENST00000477922|MGAM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8085327148438	2	560.809105	1119.60366	0.54768	0.00030714	-0.38928	-0.00021831	0.1584	8.883E-05	560.8087603082379	31.413	0.94127	31.505	31.19	32.131	0.092003					46	21	4	0	0	0	0.11055	1	2151	2151		90.37	5.4543	1	1176700	+		48021	23924	32312	32325	54236	54236					0.04863932737566756
RINPLLVMG	9	Unmodified	_RINPLLVMG_					0	0	0		ENST00000368433.5_1_1:154962752-154963160:+|nuORF	ENST00000368433.5_1_1:154962752-154963160:+|nuORF	ENST00000368433.5_1_1:154962752-154963160:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8011474609375	2	506.802237	1011.58992	-0.74642	-0.00037829	-1.7572	-0.00089057	-2.5037	-0.0012689	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.76996	1	3708	3708		33.516	7.9415	1	258120			48022	10594	32313	32326	54237	54237					0.08458983704781531
RINREIEIEIL	11	Unmodified	_RINREIEIEIL_					0	0	0			REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.6083679199219	3	466.608548	1396.80381	-0.1162	-5.4221E-05	-1.0205	-0.00047616	-1.1367	-0.00053038	466.608028235663	100.63	2.2402	100.66	99.377	101.62	0.031036					154	52	4	0	0	0	0.74771	1	10691	10691		22.562	4.0305	1	499520	+		48023	16548	32314	32327	54238	54238					0.12128362614521393
RINRPALEIAL	11	Unmodified	_RINRPALEIAL_					0	0	0			REV__ENST00000559270.5_2_14:24507775-24520174:+|nuORF	REV__ENST00000559270.5_2_14:24507775-24520174:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.9272155761719	3	422.594461	1264.76155	-1.8214	-0.00076972	-2.4208	-0.001023	-4.2423	-0.0017928	422.5933529014654	49.394	1.9735	49.419	48.567	50.541	0.025574					182	52	4	0	0	0	0.76579	1	3753	3753		18.531	2.0012	1	2033600	+		48024	20540	32315	32328	54239	54239					0.13976431996798055
RINTPPLTKLV	11	Unmodified	_RINTPPLTKLV_					0	0	0			REV__ENST00000546455.5_1_12:47473502-47610158:+|nuORF	REV__ENST00000546455.5_1_12:47473502-47610158:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92254638671875	3	417.930962	1250.77106	-1.8944	-0.00079173	3.4759	0.0014527	1.5815	0.00066095	417.93254498362114	105.63	0.19276	105.7	105.65	105.84	0.073112					5	4	2	0	0	0	0.17807	1	11201	11201		14.243	2.7886	1	144960	+		48025	28538	32316	32329	54240	54240					0.1557020028228635
RINVPSPP	8	Unmodified	_RINVPSPP_					0	0	0			REV__ENST00000494757.5_1_17:38375603-38434474:+|nuORF	REV__ENST00000494757.5_1_17:38375603-38434474:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2549743652344	2	440.255977	878.497401	-1.1281	-0.00049663	-0.16476	-7.2535E-05	-1.2928	-0.00056917	440.2557479543984	62.714	1.4312	63.102	62.273	63.704	0.3878					74	32	3	0	0	0	0.87922	1	6728	6728		31.955	3.7006	1	707290	+		48026	21734	32317	32330	54241	54241					0.05329221962892916
RIPAPLSVSSA	11	Unmodified	_RIPAPLSVSSA_					0	0	0			REV__ENST00000467242.1_1_2:30455222-30455939:+|nuORF	REV__ENST00000467242.1_1_2:30455222-30455939:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3175659179688	2	549.319306	1096.62406	0.85078	0.00046735	-3.9097	-0.0021477	-3.0589	-0.0016803	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.74763	1	10628	10628		22.58	0	1	2023500	+		48027	27152	32318	32331	54242	54242					0.0796110339738334
RIPAPNPRVK	10	Unmodified	_RIPAPNPRVK_					0	0	0			REV__ENST00000470396.1_1_1:151238797-151239150:+|nuORF	REV__ENST00000470396.1_1_1:151238797-151239150:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3603515625	2	574.356557	1146.69856	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.65	1	100.65	100.15	101.15	0								0	0	0	0.45132	1	10213	10213		19.997	0.89325	1		+		48028	27210	32319	32332	54243	54243					0.13107910999406158
RIPASDIY	8	Unmodified	_RIPASDIY_					0	0	0		ENST00000426799.1_1_X:65041564-65042074:-|nuORF	ENST00000426799.1_1_X:65041564-65042074:-|nuORF	ENST00000426799.1_1_X:65041564-65042074:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7400817871094	2	467.753267	933.491981	-0.80528	-0.00037667	2.1198	0.00099153	1.3145	0.00061486	467.75334280195676	54.136	0.79301	54.721	54.418	55.211	0.58474					44	18	3	0	0	0	0.4196	1	5553	5553		33.516	0	1	1140300			48029	11563	32320	32333	54244	54244					0.022574983804133808
RIPFFRGVK	9	Unmodified	_RIPFFRGVK_					0	0	0			REV__ENST00000373204.5_1_1:36388990-36389218:+|nuORF	REV__ENST00000373204.5_1_1:36388990-36389218:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3397216796875	2	560.342918	1118.67128	-0.60038	-0.00033642	-4.1798	-0.0023421	-4.7802	-0.0026786	560.3405348095038	89.752	2.8802	89.752	87.726	90.606	0					163	66	4	0	0	0	0.78983	1	8668	8668		27.882	1.0861	1	504890	+		48030	25751	32321	32334	54245	54245					0.11669427459014514
RIPFFRGVK	9	Unmodified	_RIPFFRGVK_					0	0	0			REV__ENST00000373204.5_1_1:36388990-36389218:+|nuORF	REV__ENST00000373204.5_1_1:36388990-36389218:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3406982421875	2	560.342918	1118.67128	-1.4184	-0.00079481	-3.3589	-0.0018821	-4.7773	-0.0026769	560.3409019697357	89.331	3.0544	89.504	87.698	90.752	0.17234					137	71	4	0	0	0	0.78536	1	8869	8869		29.15	0	1	613340	+		48031	25751	32321	32334	54246	54246					0.11669427459014514
RIPGFRDLSQH	11	Unmodified	_RIPGFRDLSQH_					0	0	0		ENSG00000174738|ENST00000312521|NR1D2;ENST00000492552.5_1_3:23987629-24018907:+|nuORF	ENSG00000174738|ENST00000312521|NR1D2	ENSG00000174738|ENST00000312521|NR1D2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.78741455078125	3	442.573949	1324.70002	0.23049	0.00010201	-0.11254	-4.9805E-05	0.11796	5.2204E-05	442.9082591070824	43.018	0.5209	42.988	42.793	43.314	-0.029461					16	11	2	0	0	0	0.17272	1	3254	3254		32.034	9.4725	1	124030			48032	6959	32322	32335	54247	54247					0.050655002975190655
RIPGFRDLSQH	11	Unmodified	_RIPGFRDLSQH_					0	0	0		ENSG00000174738|ENST00000312521|NR1D2;ENST00000492552.5_1_3:23987629-24018907:+|nuORF	ENSG00000174738|ENST00000312521|NR1D2	ENSG00000174738|ENST00000312521|NR1D2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	442.573949	1324.70002	-2.1613	-0.00095653	1.7447	0.00077216	-0.41659	-0.00018437	442.90946028599336	42.213	0.16048	42.627	42.505	42.666	0.4139	-0.25422	0.0019148	NaN	32.034	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92874			48033	6959	32322	32335							0.050655002975190655
RIPKVRIGI	9	Unmodified	_RIPKVRIGI_					0	0	0			REV__ENSG00000183747|ENST00000573854|ACSM2A	REV__ENSG00000183747|ENST00000573854|ACSM2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.360595703125	2	526.358568	1050.70258	1.057	0.00055634	4.0611	0.0021376	5.1181	0.0026939	526.3605624063631	36.088	1.9344	36.37	35.78	37.714	0.28173					146	47	5	0	0	0	0.7932	1	2860	2860		24.203	1.1603	1	5773200	+		48034	16530	32323	32336	54248	54248					0.1792600049311659
RIPKVRIGI	9	Unmodified	_RIPKVRIGI_					0	0	0			REV__ENSG00000183747|ENST00000573854|ACSM2A	REV__ENSG00000183747|ENST00000573854|ACSM2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3610229492188	2	526.358568	1050.70258	1.6664	0.00087713	3.3741	0.001776	5.0405	0.0026531	526.3602142312507	35.988	1.9361	36.429	35.808	37.744	0.44043					142	47	4	0	0	0	0.78058	1	2821	2821		30.504	1.3541	1	6841400	+		48035	16530	32323	32336	54249	54249					0.1792600049311659
RIPLCLPIF	9	Carbamidomethyl (C)	_RIPLC(Carbamidomethyl (C))LPIF_	RIPLC(1)LPIF		RIPLC(42)LPIF		0	1	0			REV__nc|ENSG00000135905|Q96BY6-3|DOCK10	REV__nc|ENSG00000135905|Q96BY6-3|DOCK10	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.8352661132812	2	564.833537	1127.65252	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.5	1	19.87	19.37	20.37	-0.6296								0	0	0	0.30678	1	660	660		42.474	8.3019	1		+		48036	19264	32324	32337	54250	54250	244				0.09380129772944201
RIPLKVLRQS	10	Unmodified	_RIPLKVLRQS_					0	0	0		nc|ENSG00000185989|Q14644-2|RASA3;ENSG00000185989|ENST00000334062|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.92950439453125	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.8651	1	3992	3992		18.531	4.445	1	2636600			48037	7767	32325	32338	54251	54251					0.17569039722025082
RIPLKVLRQS	10	Unmodified	_RIPLKVLRQS_					0	0	0		nc|ENSG00000185989|Q14644-2|RASA3;ENSG00000185989|ENST00000334062|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9295959472656	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.86014	2	4069	3819;4069		23.378	0.81632	1	2612300			48038	7767	32325	32338	54252;54253	54253					0.17569039722025082
RIPLKVLRQS	10	Unmodified	_RIPLKVLRQS_					0	0	0		nc|ENSG00000185989|Q14644-2|RASA3;ENSG00000185989|ENST00000334062|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.92919921875	3	403.931185	1208.77173	-1.8895	-0.00076324	-2.2243	-0.00089846	-4.1138	-0.0016617	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.8492	2	3706	3683;3706		18.531	1.3643	1	2300300			48039	7767	32325	32338	54254;54255	54255					0.17569039722025082
RIPLKVLRQS	10	Unmodified	_RIPLKVLRQS_					0	0	0		nc|ENSG00000185989|Q14644-2|RASA3;ENSG00000185989|ENST00000334062|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9300231933594	3	403.931185	1208.77173	0.25098	0.00010138	-4.1453	-0.0016744	-3.8943	-0.001573	403.92942319004646	47.073	4.6899	47.112	45.811	50.501	0.038181					268	130	4	0	0	0	0.86272	1	3623	3623		17.833	3.1395	1	2178500			48040	7767	32325	32338	54256	54256					0.17569039722025082
RIPPAIKS	8	Unmodified	_RIPPAIKS_					0	0	0		ENST00000470452.5_1_2:237994547-238002319:+|nuORF;nc|ENSG00000198612|Q99627-2|COPS8;ENSG00000198612|ENST00000354371|COPS8	ENST00000470452.5_1_2:237994547-238002319:+|nuORF	ENST00000470452.5_1_2:237994547-238002319:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.27972412109375	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.601	1	40.607	40.107	41.107	0.0065727								0	0	0	0.30884	1	2932	2932		13.775	0	1				48041	8295	32326	32339	54257	54257					0.10438385376653514
RIPVLVFHA	9	Unmodified	_RIPVLVFHA_					0	0	0		nc|ENSG00000119685|Q6EMB2-3|TTLL5;ENSG00000119685|ENST00000298832|TTLL5	nc|ENSG00000119685|Q6EMB2-3|TTLL5	nc|ENSG00000119685|Q6EMB2-3|TTLL5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.324951171875	2	526.324194	1050.63383	-0.18547	-9.7616E-05	1.313	0.00069106	1.1275	0.00059344	526.3248074069744	59.278	1.5395	59.372	58.359	59.898	0.094059					97	61	2	0	0	0	0.7932	1	5015	5015		26.796	1.3459	1	183600			48042	3088	32327	32340	54258	54258					0.110543361934333
RIPVLVFHA	9	Unmodified	_RIPVLVFHA_					0	0	0		nc|ENSG00000119685|Q6EMB2-3|TTLL5;ENSG00000119685|ENST00000298832|TTLL5	nc|ENSG00000119685|Q6EMB2-3|TTLL5	nc|ENSG00000119685|Q6EMB2-3|TTLL5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3234252929688	2	526.324194	1050.63383	0.415	0.00021842	0.70191	0.00036943	1.1169	0.00058786	526.3245632731013	54.903	1.3099	54.994	54.222	55.532	0.091167					57	35	2	0	0	0	0.20789	1	4506	4506		13.775	0	1	189050			48043	3088	32327	32340	54259	54259					0.110543361934333
RIPVLVFHA	9	Unmodified	_RIPVLVFHA_					0	0	0		nc|ENSG00000119685|Q6EMB2-3|TTLL5;ENSG00000119685|ENST00000298832|TTLL5	nc|ENSG00000119685|Q6EMB2-3|TTLL5	nc|ENSG00000119685|Q6EMB2-3|TTLL5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	526.324194	1050.63383	-0.15741	-8.285E-05	0.90435	0.00047598	0.74694	0.00039313	526.3245130529184	54.171	1.6747	54.755	53.831	55.505	0.58474	-0.065522	0.00038719	NaN	13.775	63	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	256590			48044	3088	32327	32340							0.110543361934333
RIPVRKALV	9	Unmodified	_RIPVRKALV_					0	0	0		ENST00000423725.5_1_2:207014644-207018402:-|nuORF;ENST00000432169.5_1_2:207012550-207018402:-|nuORF;nc|ENSG00000023228|P28331-5|NDUFS1;ENSG00000023228|ENST00000233190|NDUFS1;nc|ENSG00000023228|P28331-2|NDUFS1	ENST00000423725.5_1_2:207014644-207018402:-|nuORF	ENST00000423725.5_1_2:207014644-207018402:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3609008789062	2	526.358568	1050.70258	0.76968	0.00040513	3.9857	0.0020979	4.7554	0.002503	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.7932	1	2440	2440		23.042	4.7181	1	7968500			48045	855	32328	32341	54260	54260					0.17926000493093852
RIPVRKALV	9	Unmodified	_RIPVRKALV_					0	0	0		ENST00000423725.5_1_2:207014644-207018402:-|nuORF;ENST00000432169.5_1_2:207012550-207018402:-|nuORF;nc|ENSG00000023228|P28331-5|NDUFS1;ENSG00000023228|ENST00000233190|NDUFS1;nc|ENSG00000023228|P28331-2|NDUFS1	ENST00000423725.5_1_2:207014644-207018402:-|nuORF	ENST00000423725.5_1_2:207014644-207018402:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3607788085938	2	526.358568	1050.70258	1.057	0.00055634	4.0611	0.0021376	5.1181	0.0026939	526.3605624063631	36.088	1.9344	36.37	35.78	37.714	0.28173					146	47	5	0	0	0	0.78058	1	2847	2847		30.504	1.3541	1	5773200			48046	855	32328	32341	54261	54261					0.17926000493093852
RIPVRKALV	9	Unmodified	_RIPVRKALV_					0	0	0		ENST00000423725.5_1_2:207014644-207018402:-|nuORF;ENST00000432169.5_1_2:207012550-207018402:-|nuORF;nc|ENSG00000023228|P28331-5|NDUFS1;ENSG00000023228|ENST00000233190|NDUFS1;nc|ENSG00000023228|P28331-2|NDUFS1	ENST00000423725.5_1_2:207014644-207018402:-|nuORF	ENST00000423725.5_1_2:207014644-207018402:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3606567382812	2	526.358568	1050.70258	1.6664	0.00087713	3.3741	0.001776	5.0405	0.0026531	526.3602142312507	35.988	1.9361	36.429	35.808	37.744	0.44043					142	47	4	0	0	0	0.78058	1	2833	2833		30.504	3.7075	1	6841400			48047	855	32328	32341	54262	54262					0.17926000493093852
RIPVSVDFW	9	Unmodified	_RIPVSVDFW_					0	0	0		nc|ENSG00000147862|O00712-4|NFIB	nc|ENSG00000147862|O00712-4|NFIB	nc|ENSG00000147862|O00712-4|NFIB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	559.803955078125	2	559.803291	1117.59203	-0.63937	-0.00035792	0.78561	0.00043979	0.14624	8.1866E-05	559.8035328499079	86.861	0.95203	86.861	86.517	87.469	0					62	21	4	0	0	0	0.51307	1	8338	8338		51.335	7.2187	1	647940			48048	14981	32329	32342	54263	54263					0.03793735714225477
RIPVYINSA	9	Unmodified	_RIPVYINSA_					0	0	0			REV__ENSG00000101442|ENST00000243903|ACTR5	REV__ENSG00000101442|ENST00000243903|ACTR5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.793212890625	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.69624	1	8701	8701		40.778	1.972	1	817800	+		48049	17279	32330	32343	54264	54264					0.061854491971644165
RIQGVPKV	8	Unmodified	_RIQGVPKV_					0	0	0		ENST00000574752.5_1_17:2340122-2367575:-|nuORF;ENSG00000127804|ENST00000263092|METTL16	ENST00000574752.5_1_17:2340122-2367575:-|nuORF	ENST00000574752.5_1_17:2340122-2367575:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.30804443359375	2	448.787444	895.560336	0.86902	0.00039001	3.8895	0.0017456	4.7585	0.0021356	448.78902456498315	81.007	0.5186	81.063	80.82	81.338	0.055916					19	11	2	0	0	0	0.4196	1	8053	8053		31.955	12.595	1	59798			48050	3515	32331	32344	54265	54265					0.10837787750938332
RIQGVPKV	8	Unmodified	_RIQGVPKV_					0	0	0		ENST00000574752.5_1_17:2340122-2367575:-|nuORF;ENSG00000127804|ENST00000263092|METTL16	ENST00000574752.5_1_17:2340122-2367575:-|nuORF	ENST00000574752.5_1_17:2340122-2367575:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	448.787444	895.560336	-0.1444	-6.4804E-05	4.5817	0.0020562	4.4373	0.0019914	448.7894406759726	81.072	0.56824	81.137	80.88	81.448	0.064384	0.028022	0.00015842	NaN	31.955	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99381			48051	3515	32331	32344							0.10837787750938332
RIQGVPKV	8	Unmodified	_RIQGVPKV_					0	0	0		ENST00000574752.5_1_17:2340122-2367575:-|nuORF;ENSG00000127804|ENST00000263092|METTL16	ENST00000574752.5_1_17:2340122-2367575:-|nuORF	ENST00000574752.5_1_17:2340122-2367575:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	448.787444	895.560336	0.34211	0.00015354	4.5459	0.0020401	4.888	0.0021937	448.78942414697354	81.186	0.55458	81.126	80.878	81.433	-0.059692	0.017397	0.0001263	NaN	31.955	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75548			48052	3515	32331	32344							0.10837787750938332
RIQKELAEI	9	Unmodified	_RIQKELAEI_					0	0	0		ENSG00000182247|ENST00000396703|UBE2E2;ENSG00000170035|ENST00000410062|UBE2E3;ENST00000602762.5_1_2:181846769-181940241:+|nuORF	ENSG00000182247|ENST00000396703|UBE2E2	ENSG00000182247|ENST00000396703|UBE2E2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3283081054688	2	550.327131	1098.63971	-1.4511	-0.00079856	1.2412	0.00068307	-0.20986	-0.00011549	550.3279242402356	100.07	1.1382	100.24	99.716	100.85	0.17199					63	25	3	0	0	0	0.78536	1	10420	10420		29.15	3.5755	1	345000			48053	6553	32332	32345	54266	54266					0.09433389914420331
RIQLAPAPARA	11	Unmodified	_RIQLAPAPARA_					0	0	0			REV__ENST00000526349.5_1_8:42729111-42751823:-|nuORF	REV__ENST00000526349.5_1_8:42729111-42751823:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3534545898438	2	582.354014	1162.69348	2.7406	0.001596	-3.1524	-0.0018358	-0.4118	-0.00023981	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.6921	1	12603	12603		32.812	3.6424	1	7862700	+		48054	28207	32333	32346	54267	54267					0.1186360713677459
RIQLYERWWQK	11	Unmodified	_RIQLYERWWQK_					0	0	0			REV__nc|ENSG00000101624|Q8TAP6-3|CEP76	REV__nc|ENSG00000101624|Q8TAP6-3|CEP76	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.958251953125	3	535.959803	1604.85758	-1.7175	-0.0009205	-2.2593	-0.0012109	-3.9768	-0.0021314	535.9585819880436	42.231	1.0038	42.645	42.313	43.316	0.4139					69	24	4	0	0	0	0.80813	1	3766	3766		9.6461	0.43434	1	2136800	+		48055	17292	32334	32347	54268	54268					0.07934579836864941
RIQRATTVSQ	10	Unmodified	_RIQRATTVSQ_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.3321533203125	2	580.330736	1158.64692	0.33139	0.00019231	2.8328	0.001644	3.1642	0.0018363	580.3322507801092	39.778	0.78229	39.866	39.53	40.312	0.088375					57	19	4	0	0	0	0.2953	1	2469	2469		72.879	5.3856	1	1035100			48056	2342	32335	32348	54269	54269					0.0739412251482463
RIQRRYFRFFT	11	Unmodified	_RIQRRYFRFFT_					0	0	0		ENSG00000101407|ENST00000373447|TTI1;ENST00000487362.1_1_20:36640605-36642218:-|nuORF	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.6329956054688	3	530.631909	1588.8739	-0.1019	-5.407E-05	3.1141	0.0016524	3.0122	0.0015983	530.967866542013	48.109	0.59789	48.016	47.885	48.483	-0.093178					21	14	2	0	0	0	0.81219	1	3666	3666		8.7993	2.1397	1	130660			48057	1939	32336	32349	54270	54270					0.10301705793585825
RIQRRYFRFFT	11	Unmodified	_RIQRRYFRFFT_					0	0	0		ENSG00000101407|ENST00000373447|TTI1;ENST00000487362.1_1_20:36640605-36642218:-|nuORF	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	530.631909	1588.8739	-0.142	-7.5349E-05	3.5998	0.0019101	3.4578	0.0018348	530.6338608929716	48.204	0.55702	48.227	47.937	48.494	0.02227	0.015006	0.0004236	NaN	8.7993	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92590			48058	1939	32336	32349							0.10301705793585825
RIQRRYFRFFT	11	Unmodified	_RIQRRYFRFFT_					0	0	0		ENSG00000101407|ENST00000373447|TTI1;ENST00000487362.1_1_20:36640605-36642218:-|nuORF	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	530.631909	1588.8739	0.35921	0.00019061	3.2573	0.0017284	3.6165	0.001919	530.6334879095976	48.355	0.63734	48.393	47.96	48.597	0.037731	0.18101	-0.0001216	NaN	8.7993	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138090			48059	1939	32336	32349							0.10301705793585825
RIRFVIDEGM	10	Oxidation (M)	_RIRFVIDEGM(Oxidation (M))_		RIRFVIDEGM(1)		RIRFVIDEGM(66)	0	0	1			REV__ENST00000367521.5_1_1:183906707-183906932:-|nuORF	REV__ENST00000367521.5_1_1:183906707-183906932:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.8304443359375	2	626.329347	1250.64414	-0.062907	-3.94E-05	-2.6333	-0.0016493	-2.6962	-0.0016887	626.3275040017871	53.127	1.167	53.144	52.533	53.7	0.017487					73	31	3	0	0	0	0.37206	1	4695	4695		66.429	32.257	1	169450	+		48060	25568	32337	32350	54271	54271		394			0.028845310656834044
RIRGLLPLQGM	11	Unmodified	_RIRGLLPLQGM_					0	0	0		ENSG00000006607|ENST00000264042|FARP2	ENSG00000006607|ENST00000264042|FARP2	ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3862915039062	2	627.379175	1252.7438	0.9795	0.00061452	3.7075	0.002326	4.687	0.0029405	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.72228	1	12978	12978		27.882	0.83493	1	19815000			48061	704	32338	32351	54272	54272					0.12753393470279661
RIRHRKMRESL	11	Unmodified	_RIRHRKMRESL_					0	0	0		ENST00000495954.5_1_3:159557968-159614560:+|nuORF	ENST00000495954.5_1_3:159557968-159614560:+|nuORF	ENST00000495954.5_1_3:159557968-159614560:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.30078125	3	494.624649	1480.85212	0.76411	0.00037795	1.7295	0.00085546	2.4936	0.0012334	494.62673160848567	97.117	0.1217	97.281	97.179	97.301	0.16316					4	2	2	0	0	0	0.18331	1	10033	10033		5.6988	0	1	18989			48062	12776	32339	32352	54273	54273					0.1309257777345465
RIRIKLYFK	9	Unmodified	_RIRIKLYFK_					0	0	0		Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	Charlie1a_dup2161|chr6:30486902-30487023:+|1.0369218682392445|0.0886171994344632|3.55|63.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	618.90234375	2	618.9006	1235.78665	1.0743	0.00066487	2.4776	0.0015334	3.5518	0.0021982	618.9019046745647	88.771	0.90382	89.22	88.996	89.9	0.44893					47	21	3	0	0	0	0.7932	1	10462	10462		23.042	5.6775	1	1744000			48063	14	32340	32353	54274	54274					0.1781853159000093
RIRKQKGA	8	Unmodified	_RIRKQKGA_					0	0	0			REV__ENST00000452764.3_2_17:33760109-33760220:-|nuORF	REV__ENST00000452764.3_2_17:33760109-33760220:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8061218261719	2	478.809242	955.603932	-2.669	-0.0012779	-4.0656	-0.0019466	-6.7346	-0.0032246	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.85277	1	2810	2810		25.45	1.2474	1	370420	+		48064	26902	32341	32354	54275	54275					0.12435397248077606
RIRLQLYVF	9	Unmodified	_RIRLQLYVF_					0	0	0		nc|ENSG00000081803|Q86UW7-3|CADPS2;nc|ENSG00000081803|Q86UW7-2|CADPS2;ENSG00000081803|ENST00000449022|CADPS2	nc|ENSG00000081803|Q86UW7-3|CADPS2	nc|ENSG00000081803|Q86UW7-3|CADPS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3652954101562	2	604.369133	1206.72371	-1.2751	-0.00077064	-2.39	-0.0014444	-3.6651	-0.0022151	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.7932	1	12841	12841		25.45	3.7644	1	3346600			48065	1470	32342	32355	54276	54276					0.12861965801971564
RIRLRRTLRNL	11	Unmodified	_RIRLRRTLRNL_					0	0	0		nc|ENSG00000236311|P0CAT3|TLX1NB	nc|ENSG00000236311|P0CAT3|TLX1NB	nc|ENSG00000236311|P0CAT3|TLX1NB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.9866638183594	3	489.654937	1465.94298	0.22144	0.00010843	-0.98571	-0.00048266	-0.76427	-0.00037423	489.65441973916506	17.531	0.42737	17.048	16.804	17.232	-0.48256					13	9	2	0	0	0	0.79224	1	266	266		12.957	3.3113	1	59790			48066	15276	32343	32356	54277	54277					0.22864789813206698
RIRNLDTT	8	Unmodified	_RIRNLDTT_					0	0	0		nc|ENSG00000185483|Q01973-3|ROR1;ENSG00000185483|ENST00000371079|ROR1	nc|ENSG00000185483|Q01973-3|ROR1	nc|ENSG00000185483|Q01973-3|ROR1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.78057861328125	2	494.780348	987.546142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.68	1	85.829	85.329	86.329	0.14857								0	0	0	0.29703	1	8394	8394		37.159	1.5408	1				48067	7717	32344	32357	54278	54278					0.05187090531967442
RIRNLDTT	8	Unmodified	_RIRNLDTT_					0	0	0		nc|ENSG00000185483|Q01973-3|ROR1;ENSG00000185483|ENST00000371079|ROR1	nc|ENSG00000185483|Q01973-3|ROR1	nc|ENSG00000185483|Q01973-3|ROR1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7802429199219	2	494.780348	987.546142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.557	1	86.706	86.206	87.206	0.14902								0	0	0	0.30457	1	8519	8519		50.025	5.4935	1				48068	7717	32344	32357	54279	54279					0.05187090531967442
RIRPRLKL	8	Unmodified	_RIRPRLKL_					0	0	0			REV__ENSG00000270765|ENST00000604641|GAS2L2	REV__ENSG00000270765|ENST00000604641|GAS2L2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3605346679688	2	526.364185	1050.71382	-1.5923	-0.00083811	-4.4023	-0.0023172	-5.9946	-0.0031553	526.3617428180578	33.41	1.543	33.41	33.111	34.654	0					182	44	5	0	0	0	0.83058	1	1868	1868		12.959	0	1	7280900	+		48069	23979	32345	32358	54280	54280					0.1904882258725138
RIRQFRLRIYR	11	Unmodified	_RIRQFRLRIYR_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.3067626953125	3	526.32682	1575.95863	1.2418	0.00065357	-3.6238	-0.0019073	-2.382	-0.0012537	526.3246347820428	98.528	1.0076	98.576	98.012	99.019	0.048157					40	22	3	0	0	0	0.18343	1	10584	10584		8.7993	5.3906	1	58864	+		48070	23147	32346	32359	54281	54281					0.19369076330258395
RIRQFRLRIYR	11	Unmodified	_RIRQFRLRIYR_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	526.32682	1575.95863	-0.03785	-1.9922E-05	-2.7519	-0.0014484	-2.7897	-0.0014683	526.3251857997079	98.76	1.2645	98.81	97.708	98.973	0.04982	0.11687	0.00099094	NaN	8.7993	40	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95966	+		48071	23147	32346	32359							0.19369076330258395
RIRQLLRRPQV	11	Unmodified	_RIRQLLRRPQV_					0	0	0		nc|ENSG00000167612|Q7Z3H0-1|ANKRD33;ENSG00000167612|ENST00000301190|ANKRD33	nc|ENSG00000167612|Q7Z3H0-1|ANKRD33	nc|ENSG00000167612|Q7Z3H0-1|ANKRD33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3100891113281	3	478.975788	1433.90553	-0.89818	-0.00043021	-1.4459	-0.00069257	-2.3441	-0.0011228	478.9750533889841	51.817	1.8474	51.852	50.982	52.829	0.034588					134	56	3	0	0	0	0.76892	1	4108	4108		17.833	3.7471	1	276750			48072	6307	32347	32360	54282	54282					0.2059369854760007
RIRQLLRRPQV	11	Unmodified	_RIRQLLRRPQV_					0	0	0		nc|ENSG00000167612|Q7Z3H0-1|ANKRD33;ENSG00000167612|ENST00000301190|ANKRD33	nc|ENSG00000167612|Q7Z3H0-1|ANKRD33	nc|ENSG00000167612|Q7Z3H0-1|ANKRD33	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97607421875	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.874	1	45.889	45.389	46.389	0.015514								0	0	0	0.56276	1	3332	3332		8.7993	0	1				48073	6307	32347	32360	54283	54283					0.2059369854760007
RIRQLLRRPQV	11	Unmodified	_RIRQLLRRPQV_					0	0	0		nc|ENSG00000167612|Q7Z3H0-1|ANKRD33;ENSG00000167612|ENST00000301190|ANKRD33	nc|ENSG00000167612|Q7Z3H0-1|ANKRD33	nc|ENSG00000167612|Q7Z3H0-1|ANKRD33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9762878417969	3	478.975788	1433.90553	-0.41434	-0.00019846	-1.9974	-0.00095669	-2.4117	-0.0011551	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.81021	1	4161	4161		9.2118	2.4998	1	341610			48074	6307	32347	32360	54284	54284					0.2059369854760007
RIRRQVEHFL	10	Unmodified	_RIRRQVEHFL_					0	0	0			REV__ENSG00000159461|ENST00000290649|AMFR	REV__ENSG00000159461|ENST00000290649|AMFR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9327697753906	3	451.933588	1352.77894	2.3813	0.0010762	-4.3483	-0.0019651	-1.967	-0.00088894	451.9315121357165	99.085	2.2621	99.03	97.603	99.866	-0.054817					133	52	3	0	0	0	0.86698	1	10795	10795		28.081	2.9555	1	545200	+		48075	20663	32348	32361	54285	54285					0.11665772322453449
RIRRRGPNW	9	Unmodified	_RIRRRGPNW_					0	0	0			REV__ENST00000473443.5_1_2:219483348-219487425:+|nuORF	REV__ENST00000473443.5_1_2:219483348-219487425:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5748291015625	3	404.239123	1209.69554	0.84182	0.0003403	-3.3021	-0.0013348	-2.4602	-0.00099452	404.2369341579307	81.614	0.28529	82.04	81.795	82.08	0.42646					15	6	3	0	0	0	0.20789	1	9391	9391		52.937	5.2794	1	109730	+		48076	27283	32349	32362	54286	54286					0.09908080665263697
RIRSHALIKD	10	Unmodified	_RIRSHALIKD_					0	0	0			REV__nc|ENSG00000133110|Q15063-7|POSTN	REV__nc|ENSG00000133110|Q15063-7|POSTN	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8668212890625	2	604.864746	1207.71494	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.11	1	117.09	116.59	117.59	-0.02433								0	0	0	0.45132	1	12971	12971		20.03	0.033703	1		+	+	48077	19057	32350	32363	54287	54287					0.11938992165482887
RIRTRPALWN	10	Unmodified	_RIRTRPALWN_					0	0	0		nc|ENSG00000153064|Q8NDB2-3|BANK1;nc|ENSG00000153064|Q8NDB2-2|BANK1;ENSG00000153064|ENST00000322953|BANK1;nc|ENSG00000153064|Q8NDB2-4|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8823852539062	2	641.878188	1281.74182	2.2004	0.0014124	4.4172	0.0028353	6.6176	0.0042477	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.86218	1	10549	10549		32.812	3.6424	1	3624200			48078	5212	32351	32364	54288	54288					0.11222100776694788
RIRVKLPK	8	Unmodified	_RIRVKLPK_					0	0	0		ENST00000512594.5_1_4:7968719-8022199:-|nuORF;nc|ENSG00000163995|Q6H8Q1-4|ABLIM2;nc|ENSG00000163995|Q6H8Q1-8|ABLIM2;nc|ENSG00000163995|Q6H8Q1-3|ABLIM2;nc|ENSG00000163995|Q6H8Q1-7|ABLIM2;nc|ENSG00000163995|Q6H8Q1-2|ABLIM2;nc|ENSG00000163995|Q6H8Q1-5|ABLIM2;nc|ENSG00000163995|Q6H8Q1|ABLIM2;ENSG00000163995|ENST00000447017|ABLIM2	ENST00000512594.5_1_4:7968719-8022199:-|nuORF	ENST00000512594.5_1_4:7968719-8022199:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.284912109375	2	505.353286	1008.69202	0.087695	4.4317E-05	0.77531	0.0003918	0.863	0.00043612	505.35369876688463	53.661	1.4153	54.075	53.499	54.914	0.4139					54	33	2	0	0	0	0.4196	1	5533	5533		24.203	0	1	390280			48079	5897	32352	32365	54289	54289					0.18802017838697793
RIRWLMSA	8	Unmodified	_RIRWLMSA_					0	0	0			REV__nc|ENSG00000159899|P20594-2|NPR2	REV__nc|ENSG00000159899|P20594-2|NPR2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7933959960938	2	516.792204	1031.56985	-0.83709	-0.0004326	3.2784	0.0016943	2.4413	0.0012617	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.884	1	8572	8572		33.516	1.9858	1	490270	+		48080	20685	32353	32366	54290	54290					0.055332327648102364
RISAARSTPAP	11	Unmodified	_RISAARSTPAP_					0	0	0		ENST00000502692.5_1_11:66313918-66328094:+|nuORF	ENST00000502692.5_1_11:66313918-66328094:+|nuORF	ENST00000502692.5_1_11:66313918-66328094:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.32177734375	2	563.820004	1125.62546	-1.0471	-0.0005904	-3.9143	-0.002207	-4.9615	-0.0027974	563.8176364165028	57.434	0.57993	57.434	57.304	57.884	0					32	22	2	0	0	0	0.67778	1	4941	4941		35.152	7.0705	1	88435			48081	12860	32354	32367	54291	54291					0.0676673748612302
RISALMWEVR	10	Unmodified	_RISALMWEVR_					0	0	0		nc|ENSG00000165288|Q6RI45-5|BRWD3;ENSG00000165288|ENST00000373275|BRWD3;ENST00000473691.1_1_X:79938122-79975072:-|nuORF;nc|ENSG00000165288|Q6RI45-3|BRWD3;nc|ENSG00000165288|Q6RI45-4|BRWD3;nc|ENSG00000165288|Q6RI45-2|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.8480834960938	2	630.847707	1259.68086	1.363	0.00085985	4.4463	0.0028049	5.8093	0.0036648	630.8498159070497	60.27	0.34418	60.371	60.217	60.561	0.10082					22	13	2	0	0	0	0.82886	1	5206	5206		37.812	1.3648	1	104060			48082	6069	32355	32368	54292	54292					0.06140827682224881
RISGSRSRVF	10	Unmodified	_RISGSRSRVF_					0	0	0		ENST00000519927.5_1_8:72443445-72460383:-|nuORF	ENST00000519927.5_1_8:72443445-72460383:-|nuORF	ENST00000519927.5_1_8:72443445-72460383:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.8334350585938	2	582.833446	1163.65234	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.377	1	94.81	94.31	95.31	0.4324								0	0	0	0.45132	1	11263	11263		29.17	8.2231	1				48083	13148	32356	32369	54293	54293					0.07705846097314861
RISHWTATK	9	Unmodified	_RISHWTATK_					0	0	0		ENST00000337451.7_1_15:23034209-23034353:-|nuORF	ENST00000337451.7_1_15:23034209-23034353:-|nuORF	ENST00000337451.7_1_15:23034209-23034353:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3024291992188	2	550.30399	1098.59343	0.058555	3.2223E-05	0.018616	1.0244E-05	0.077171	4.2467E-05	550.3039008656866	21.801	0.65516	21.358	21.107	21.762	-0.44324					31	14	3	0	0	0	0.13808	3	815	815;824;835		85.862	27.08	1	155670			48084	10190	32357	32370	54294;54295;54296	54294					0.04807369802983885
RISIRHMV	8	Unmodified	_RISIRHMV_					0	0	0		nc|ENSG00000198216|Q15878-2|CACNA1E;nc|ENSG00000198216|Q15878-3|CACNA1E;ENSG00000198216|ENST00000367573|CACNA1E	nc|ENSG00000198216|Q15878-2|CACNA1E	nc|ENSG00000198216|Q15878-2|CACNA1E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3004455566406	2	506.297653	1010.58075	2.29	0.0011594	4.2779	0.0021659	6.5679	0.0033253	506.2997439327226	96.465	1.166	96.408	95.894	97.06	-0.056389					72	26	3	0	0	0	0.85277	1	10315	10315		25.45	2.4077	1	446160			48085	8256	32358	32371	54297	54297					0.07588635139097732
RISKPTIMF	9	Unmodified	_RISKPTIMF_					0	0	0			REV__ENSG00000188771|ENST00000338832|PLET1	REV__ENSG00000188771|ENST00000338832|PLET1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8161010742188	2	546.815344	1091.61614	0.69695	0.0003811	2.9549	0.0016158	3.6519	0.0019969	546.8168015948943	15.861	0.29414	15.939	15.814	16.108	0.077959					21	12	2	0	0	0	0.64922	1	60	60		44.117	3.3386	1	116450	+		48086	23028	32359	32372	54298	54298					0.07399252876257378
RISKPTIMF	9	Unmodified	_RISKPTIMF_					0	0	0			REV__ENSG00000188771|ENST00000338832|PLET1	REV__ENSG00000188771|ENST00000338832|PLET1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	546.815344	1091.61614	1.0441	0.00057091	2.5475	0.001393	3.5915	0.0019639	546.8165669986155	16.177	0.2505	16.094	15.961	16.211	-0.083363	0.037092	-0.00036658	NaN	44.117	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104320	+		48087	23028	32359	32372							0.07399252876257378
RISKRKLHIS	10	Unmodified	_RISKRKLHIS_					0	0	0		nc|ENSG00000133863|Q9BXT5|TEX15;ENSG00000133863|ENST00000643185|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.26556396484375	3	413.266568	1236.77787	0.21308	8.806E-05	3.766	0.0015564	3.9791	0.0016444	413.2670936743631	41.866	2.062	41.835	40.73	42.792	-0.030991					122	53	4	0	0	0	0.85441	1	3028	3028		20.837	1.5745	1	252870			48088	3897	32360	32373	54299	54299					0.16895557953557727
RISKRKLHIS	10	Unmodified	_RISKRKLHIS_					0	0	0		nc|ENSG00000133863|Q9BXT5|TEX15;ENSG00000133863|ENST00000643185|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2671203613281	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.331	1	41.285	40.785	41.785	-0.045467								0	0	0	0.45132	1	2690	2690		20.03	0.7678	1				48089	3897	32360	32373	54300	54300					0.16895557953557727
RISKRLPG	8	Unmodified	_RISKRLPG_					0	0	0			REV__ENST00000303210.8_1_7:100271283-100273893:+|nuORF	REV__ENST00000303210.8_1_7:100271283-100273893:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8005676269531	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.8347	1	3260	3260		23.042	3.6825	1	1570500	+		48090	24794	32361	32374	54301	54301					0.1163659249950797
RISLAIPN	8	Unmodified	_RISLAIPN_					0	0	0		ENSG00000165660|ENST00000298492|ABRAXAS2	ENSG00000165660|ENST00000298492|ABRAXAS2	ENSG00000165660|ENST00000298492|ABRAXAS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2406005859375	2	442.271627	882.528701	-0.68322	-0.00030217	-0.77827	-0.0003442	-1.4615	-0.00064637	442.27113745756975	80.908	0.44366	81.329	81.144	81.588	0.4215					14	10	2	0	0	0	0.4196	1	9288	9288		29.15	1.2673	1	198850			48091	6106	32362	32375	54302	54302					0.08273794996989636
RISLKKFC	8	Unmodified	_RISLKKFC_					0	0	0		ENSG00000162068|ENST00000293973|NTN3	ENSG00000162068|ENST00000293973|NTN3	ENSG00000162068|ENST00000293973|NTN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.7957763671875	2	497.796955	993.579357	-1.5279	-0.00076056	-0.78532	-0.00039093	-2.3132	-0.0011515	497.79634722185193	48.476	0.80991	48.476	47.85	48.66	0					53	20	3	0	0	0	0.90523	1	3717	3717		40.778	8.8233	1	518630			48092	5666	32363	32376	54303	54303					0.08231001050330633
RISRRQQKKEV	11	Unmodified	_RISRRQQKKEV_					0	0	0			REV__nc|ENSG00000147548|Q9BZ95-4|NSD3	REV__nc|ENSG00000147548|Q9BZ95-4|NSD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.6237487792969	3	476.623303	1426.84808	-0.29165	-0.00013901	1.0591	0.00050481	0.76748	0.0003658	476.6237090735966	107.88	0.41002	107.92	107.56	107.97	0.035622					34	9	5	0	0	0	0.77803	1	11864	11864		15.921	0	1	121210000	+		48093	20075	32364	32377	54304	54304					0.1517281155136061
RISSFTPKMQG	11	Unmodified	_RISSFTPKMQG_					0	0	0		nc|ENSG00000079841|Q86UR5-12|RIMS1;nc|ENSG00000079841|Q86UR5-3|RIMS1;nc|ENSG00000079841|Q86UR5-4|RIMS1;ENSG00000079841|ENST00000521978|RIMS1	nc|ENSG00000079841|Q86UR5-12|RIMS1	nc|ENSG00000079841|Q86UR5-12|RIMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3272705078125	2	626.329347	1250.64414	-0.15906	-9.9625E-05	-2.5062	-0.0015697	-2.6652	-0.0016693	626.3277543404057	53.246	0.94266	53.242	52.744	53.687	-0.0033035					65	25	3	0	0	0	0.61907	1	4660	4660		32.751	1.2207	1	196380			48094	1430	32365	32378	54305	54305					0.028845310656834044
RISSNPVAK	9	Unmodified	_RISSNPVAK_					0	0	0		ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8-6|RNF213;ENST00000427003.7_1_17:78356226-78367295:+|nuORF;ENST00000411702.7_1_17:78356744-78367295:+|nuORF	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.2849426269531	2	486.285266	970.555979	-0.13669	-6.6471E-05	-0.015348	-7.4634E-06	-0.15204	-7.3935E-05	486.2851393074563	21.327	0.89202	20.699	20.296	21.188	-0.62835					49	23	3	0	0	0	0.41984	1	768	768		56.434	0.92959	1	587940			48095	6887	32366	32379	54306	54306					0.06952278537369239
RISTDSVHGHT	11	Unmodified	_RISTDSVHGHT_					0	0	0			REV__ENST00000491449.5_1_22:50658476-50664613:-|nuORF	REV__ENST00000491449.5_1_22:50658476-50664613:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.3311767578125	2	605.302175	1208.5898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.003	1	26.027	25.527	26.527	0.024021								0	0	0	0.56276	1	968	968		35.152	1.2304	1		+		48096	18762	32367	32380	54307	54307					-0.006153447615361074
RISVIKSVF	9	Unmodified	_RISVIKSVF_					0	0	0		ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8271484375	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.77546	2	10206	10206;10229		31.955	9.995	1	15330000			48097	7064	32368	32381	54308;54309	54308					0.12214899127980061
RISVIKSVF	9	Unmodified	_RISVIKSVF_					0	0	0		ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.827880859375	2	524.829309	1047.64407	-0.59499	-0.00031227	-2.9841	-0.0015662	-3.5791	-0.0018784	524.8275943455435	102.47	0.70876	102.47	102.25	102.96	0					43	17	3	0	0	0	0.7932	1	10480	10480		23.042	1.0826	1	339820			48098	7064	32368	32381	54310	54310					0.12214899127980061
RISVIKSVF	9	Unmodified	_RISVIKSVF_					0	0	0		ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208|ENST00000321990|ATAD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8275146484375	2	524.829309	1047.64407	-0.12962	-6.8027E-05	-3.5193	-0.001847	-3.6489	-0.001915	524.8273126123019	102.03	1.1787	102.23	101.8	102.98	0.19483					72	28	3	0	0	0	0.7932	1	10714	10714		21.96	0	1	693200			48099	7064	32368	32381	54311	54311					0.12214899127980061
RITATAGAAVA	11	Unmodified	_RITATAGAAVA_					0	0	0		ENSG00000147100|ENST00000587091|SLC16A2	ENSG00000147100|ENST00000587091|SLC16A2	ENSG00000147100|ENST00000587091|SLC16A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2901611328125	2	501.290548	1000.56654	-0.52378	-0.00026256	0.16738	8.3908E-05	-0.35639	-0.00017866	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.61369	1	8561	8561		42.864	0.46813	1	2929300			48100	4880	32369	32382	54312	54312					0.06628261191792717
RITDQSTPGW	10	Unmodified	_RITDQSTPGW_					0	0	0			REV__nc|ENSG00000167671|Q9BZV1-2|UBXN6	REV__nc|ENSG00000167671|Q9BZV1-2|UBXN6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.7909545898438	2	580.78837	1159.56219	0.21448	0.00012457	3.1857	0.0018502	3.4002	0.0019748	580.7900272528708	18.875	0.8325	18.948	18.778	19.61	0.073463					32	25	2	0	0	0	0.85694	1	387	387		21.96	2.8564	1	29306	+		48101	21414	32370	32383	54313	54313					-0.01121248021786414
RITFRRLN	8	Unmodified	_RITFRRLN_					0	0	0			REV__ENST00000487406.2_1_9:133495824-133506568:+|nuORF	REV__ENST00000487406.2_1_9:133495824-133506568:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3272705078125	2	538.327799	1074.64105	-1.4901	-0.00080219	-0.38647	-0.00020805	-1.8766	-0.0010102	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.87479	1	10441	10441		30.504	3.8107	1	93615000	+		48102	17647	32371	32384	54314	54314					0.10671068793840277
RITHFIAS	8	Unmodified	_RITHFIAS_					0	0	0			REV__ENSG00000151025|ENST00000376351|GPR158	REV__ENSG00000151025|ENST00000376351|GPR158	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.76702880859375	2	472.769252	943.52395	-0.41041	-0.00019403	-3.7134	-0.0017556	-4.1238	-0.0019496	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.90465	1	8359	8359		40.573	1.7665	1	590200	+		48103	20235	32372	32385	54315	54315					0.04992910854218735
RITIKNPKPQA	11	Unmodified	_RITIKNPKPQA_					0	0	0		ENST00000440636.1_1_7:21468363-21468411:+|nuORF	ENST00000440636.1_1_7:21468363-21468411:+|nuORF	ENST00000440636.1_1_7:21468363-21468411:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3825073242188	2	633.388054	1264.76155	-0.79334	-0.00050249	-3.6185	-0.0022919	-4.4118	-0.0027944	633.3858115557084	49.904	1.4514	49.904	49.018	50.469	0					50	33	2	0	0	0	0.74405	1	3961	3961		9.1829	0	1	147250			48104	11773	32373	32386	54316	54316					0.13976431996798055
RITKRLRKH	9	Unmodified	_RITKRLRKH_					0	0	0		ENSG00000221843|ENST00000447166|C2orf16;nc|ENSG00000221843|Q68DN1|SPATA31H1	ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3663940429688	2	604.396548	1206.77854	0.90429	0.00054655	2.6649	0.0016106	3.5692	0.0021572	604.398065467141	105.02	0.25029	105.13	105.02	105.28	0.10766					8	5	2	0	0	0	0.20789	1	11182	11182		15.642	4.7763	1	128360			48105	8672	32374	32387	54317	54317					0.18342397393280407
RITLITLMKY	10	Unmodified	_RITLITLMKY_					0	0	0			REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|192|2|anti-sense	REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|192|2|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.92254638671875	3	417.921298	1250.74206	-0.18602	-7.7743E-05	2.6603	0.0011118	2.4743	0.0010341	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.86047	1	11476	11476		22.562	0	1	19495000	+		48106	29651	32375	32388	54318	54318					0.12672339661685328
RITLITLMKY	10	Unmodified	_RITLITLMKY_					0	0	0			REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|192|2|anti-sense	REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|192|2|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3794555664062	2	626.378309	1250.74206	1.3741	0.00086073	0.75761	0.00047455	2.1317	0.0013353	626.3786910858371	105.48	2.5428	105.64	104.92	107.46	0.15924					334	63	6	0	0	0	0.86471	1	11439	11439		30.318	1.1477	1	79850000	+		48107	29651	32375	32388	54319	54319					0.12672339661685328
RITLITLMKY	10	Unmodified	_RITLITLMKY_					0	0	0			REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|192|2|anti-sense	REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|192|2|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3798217773438	2	626.378309	1250.74206	0.92606	0.00058007	0.53106	0.00033265	1.4571	0.00091271	626.3785630608256	107.87	0.55867	107.95	107.45	108.01	0.084412					54	13	5	0	0	0	0.86218	1	11538	11538		32.812	1.2826	1	22268000	+		48108	29651	32375	32388	54320	54320					0.12672339661685328
RITLITLMKY	10	Unmodified	_RITLITLMKY_					0	0	0			REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|192|2|anti-sense	REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|192|2|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3792114257812	2	626.378309	1250.74206	-1.2034	-0.00075379	3.2333	0.0020253	2.0299	0.0012715	626.3801652504003	107.85	0.68172	107.89	107.29	107.97	0.036125					50	16	4	0	0	0	0.78666	1	11512	11512		40.058	4.9061	1	22990000	+		48109	29651	32375	32388	54321	54321					0.12672339661685328
RITLITLMKY	10	Unmodified	_RITLITLMKY_					0	0	0			REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|192|2|anti-sense	REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|192|2|anti-sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3795166015625	2	626.378309	1250.74206	4.8483	0.0030369	-2.6642	-0.0016688	2.1841	0.0013681	626.376538751344	105.56	2.7242	105.75	104.85	107.57	0.18647					224	90	4	0	0	0	0.86587	1	12931	12931		29.17	0	1	2877800	+		48110	29651	32375	32388	54322	54322					0.12672339661685328
RITLLDVVF	9	Unmodified	_RITLLDVVF_					0	0	0		nc|ENSG00000172752|A8TX70-2|COL6A5;ENSG00000172752|ENST00000373157|COL6A5;nc|ENSG00000172752|A8TX70|COL6A5	nc|ENSG00000172752|A8TX70-2|COL6A5	nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3268432617188	2	538.329142	1074.64373	-0.15628	-8.4129E-05	-3.1712	-0.0017072	-3.3275	-0.0017913	538.3273734998361	103.57	1.2288	103.57	103.11	104.34	-0.0016403					90	29	4	0	0	0	0.78536	1	11148	11148		29.15	0	1	1025700			48111	6790	32376	32389	54323	54323					0.10939479408125408
RITLLDVVF	9	Unmodified	_RITLLDVVF_					0	0	0		nc|ENSG00000172752|A8TX70-2|COL6A5;ENSG00000172752|ENST00000373157|COL6A5;nc|ENSG00000172752|A8TX70|COL6A5	nc|ENSG00000172752|A8TX70-2|COL6A5	nc|ENSG00000172752|A8TX70-2|COL6A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3267822265625	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.76764	1	12308	12308		34.173	0	1	4041000			48112	6790	32376	32389	54324	54324					0.10939479408125408
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.38330078125	2	627.382437	1252.75032	-0.21859	-0.00013714	0.24384	0.00015298	0.025247	1.584E-05	627.3823747340618	111.34	0.42085	111.28	111.08	111.5	-0.059937					29	12	4	0	0	0	0.53361	1	12115	12115		49.536	16.724	1	5771700	+		48113	21535	32377	32390	54325	54325					0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3833618164062	2	627.382437	1252.75032	-0.21918	-0.00013751	0.64139	0.0004024	0.42221	0.00026489	627.382569161749	117.84	0.45222	117.77	117.68	118.13	-0.07531					39	17	3	0	0	0	0.73893	2	12659	12659;12666		24.519	1.7889	1	1073400	+		48114	21535	32377	32390	54326;54327	54326					0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	627.3764038085938	2	627.382437	1252.75032	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.16	1	112.13	111.63	112.63	-0.025414								0	0	0	0.56276	1	12388	12388		41.427	8.6142	1		+		48115	21535	32377	32390	54328	54328					0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.385009765625	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.60058	10	12799	12328;12348;12415;12455;12485;12496;12617;12627;12799;12897		44.377	10.399	1	19815000	+		48116	21535	32377	32390	54329;54330;54331;54332;54333;54334;54335;54336;54337;54338	54337					0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3826293945312	2	627.382437	1252.75032	1.3884	0.00087108	-1.8152	-0.0011388	-0.42679	-0.00026776	627.3810650235214	111.67	0.61607	111.78	111.48	112.09	0.11118					52	18	4	0	0	0	0.53361	3	12050	12024;12044;12050		49.536	15.5	1	62529000	+		48117	21535	32377	32390	54339;54340;54341	54341					0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3828735351562	2	627.382437	1252.75032	1.3883	0.00087098	-1.7808	-0.0011173	-0.39257	-0.00024629	627.3811393436591	112.19	0.42046	112.3	112.06	112.48	0.10638					48	15	4	0	0	0	0.62614	1	12108	12108		41.427	3.6151	1	25719000	+		48118	21535	32377	32390	54342	54342					0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3822631835938	2	627.382437	1252.75032	0.92716	0.00058169	-1.2273	-0.00076996	-0.30009	-0.00018827	627.3814833817243	111.89	0.64575	111.96	111.47	112.12	0.069542					69	19	4	0	0	0	0.60058	2	12016	12016;12048		44.377	7.9304	1	15643000	+		48119	21535	32377	32390	54343;54344	54343					0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3843994140625	2	627.382437	1252.75032	0.92709	0.00058164	-0.48746	-0.00030582	0.43963	0.00027582	627.3819778015263	118.8	0.24324	118.86	118.79	119.03	0.060577					22	9	4	0	0	0	0.7144	1	12492	12492		29.17	2.1227	1	434870	+		48120	21535	32377	32390	54345	54345					0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.3836669921875	2	627.382437	1252.75032	-1.2001	-0.00075294	0.60915	0.00038217	-0.59097	-0.00037077	627.3827611804128	112.09	1.416	112.07	111.56	112.98	-0.01989					130	45	4	0	0	0	0.72739	1	11958	11958		27.047	1.4733	1	42384000	+		48121	21535	32377	32390	54346	54346					0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3850708007812	2	627.382437	1252.75032	2.3057	0.0014466	-2.6415	-0.0016572	-0.33579	-0.00021067	627.3803631374124	110.82	0.68079	110.87	110.56	111.24	0.054062					56	23	3	0	0	0	0.7144	1	13433	13433		29.17	0	1	353100	+		48122	21535	32377	32390	54347	54347					0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3839111328125	2	627.382437	1252.75032	2.3056	0.0014465	-2.8861	-0.0018107	-0.58047	-0.00036418	627.3803712370747	111.61	0.69481	111.65	111.16	111.85	0.041832					78	24	4	0	0	0	0.7144	1	13487	13487		29.17	2.4771	1	19059000	+		48123	21535	32377	32390	54348	54348					0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	627.382437	1252.75032	-0.047998	-3.0113E-05	0.25114	0.00015756	0.20314	0.00012745	627.3824599507525	111.04	0.88773	111.04	110.79	111.68	0	-0.21196	0.00050229	NaN	49.536	42	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39561	+		48124	21535	32377	32390							0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	627.382437	1252.75032	1.3884	0.00087108	-1.8152	-0.0011388	-0.42679	-0.00026776	627.3810650235214	111.67	0.61607	111.78	111.48	112.09	0.11118	-0.025369	-0.00051812	NaN	49.536	52	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62529000	+		48125	21535	32377	32390							0.13405609902679316
RITLLQVPLNS	11	Unmodified	_RITLLQVPLNS_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	627.382437	1252.75032	0.9271	0.00058164	-0.91787	-0.00057585	0.0092291	5.7902E-06	627.3816040296016	111.26	0.49553	111.33	110.97	111.47	0.069542	0.085087	-0.00096454	NaN	49.536	53	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2019600	+		48126	21535	32377	32390							0.13405609902679316
RITPPPQGSA	10	Unmodified	_RITPPPQGSA_					0	0	0			REV__nc|ENSG00000154133|Q8WZ75-2|ROBO4	REV__nc|ENSG00000154133|Q8WZ75-2|ROBO4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2815551757812	2	512.282723	1022.55089	-0.92106	-0.00047184	-1.9464	-0.00099711	-2.8675	-0.0014689	512.2816133607977	84.69	1.8154	84.69	83.802	85.618	0					71	41	2	0	0	0	0.86218	1	8018	8018		32.812	2.4947	1	77833	+		48127	20369	32378	32391	54349	54349					0.0405197467475773
RITVRTQPTK	10	Unmodified	_RITVRTQPTK_					0	0	0			REV__nc|ENSG00000100311|P01127-2|PDGFB	REV__nc|ENSG00000100311|P01127-2|PDGFB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.57958984375	3	400.578811	1198.7146	3.1796	0.0012737	1.3359	0.00053514	4.5155	0.0018088	400.57916816268914	115.86	0.63822	115.89	115.41	116.05	0.026466					29	20	2	0	0	0	0.85259	1	12674	12674		20.03	1.7684	1	56920	+		48128	17167	32379	32392	54350	54350					0.12319572445630911
RITWVGVTG	9	Unmodified	_RITWVGVTG_					0	0	0		ENSG00000114270|ENST00000681320|COL7A1;nc|ENSG00000114270|Q02388-2|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7800598144531	2	494.782359	987.550165	-0.85772	-0.00042438	-3.1278	-0.0015476	-3.9855	-0.001972	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.77696	1	8865	8865		31.53	3.6476	1	737700			48129	2764	32380	32393	54351	54351					0.055891800257199975
RIVGFHTN	8	Unmodified	_RIVGFHTN_					0	0	0			REV__ENST00000533478.5_1_16:81171088-81180967:-|nuORF	REV__ENST00000533478.5_1_16:81171088-81180967:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28765869140625	2	472.259051	942.503549	-0.92005	-0.0004345	-1.252	-0.00059129	-2.1721	-0.0010258	472.25799807830015	94.815	0.20744	95.046	94.859	95.067	0.23103					5	4	2	0	0	0	0.4196	1	9676	9676		32.812	6.1195	1	113540	+		48130	28347	32381	32394	54352	54352					0.029997401944115154
RIVKLVEA	8	Unmodified	_RIVKLVEA_					0	0	0			REV__ENST00000580029.1_1_17:37790107-37792115:+|nuORF	REV__ENST00000580029.1_1_17:37790107-37792115:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.3005676269531	2	464.302927	926.591301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.3	1	15.349	14.849	15.849	0.04908								0	0	0	0.29498	1	32	32		26.796	1.3459	1		+		48131	18963	32382	32395	54353	54353					0.1250694106516903
RIVSRREAAR	10	Unmodified	_RIVSRREAAR_					0	0	0			REV__ENSG00000176022|ENST00000379198|B3GALT6	REV__ENSG00000176022|ENST00000379198|B3GALT6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.25384521484375	3	405.246055	1212.71634	1.0635	0.00043097	1.5645	0.000634	2.628	0.001065	405.2465768037405	23.434	2.4302	22.86	22.409	24.839	-0.57415					118	56	3	0	0	0	0.85979	1	1133	1133		35.178	3.6484	1	383090	+		48132	22098	32383	32396	54354	54354					0.11848626254254668
RIVVNIDLN	9	Unmodified	_RIVVNIDLN_					0	0	0			REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31	REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.3137817382812	2	528.314023	1054.61349	2.8563	0.001509	-2.641	-0.0013953	0.2152	0.0001137	528.3126813461913	98.458	1.2186	98.403	97.86	99.078	-0.054825					71	27	4	0	0	0	0.76255	1	10662	10662		35.618	1.4457	1	423590	+		48133	20506	32384	32397	54355	54355					0.08837120742964544
RIWRGVLH	8	Unmodified	_RIWRGVLH_					0	0	0			REV__ENSG00000100504|ENST00000216392|PYGL;REV__ENSG00000100994|ENST00000216962|PYGB;REV__ENSG00000068976|ENST00000164139|PYGM	REV__ENSG00000068976|ENST00000164139|PYGM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8095703125	2	518.811785	1035.60902	-1.4636	-0.00075931	-0.84493	-0.00043836	-2.3085	-0.0011977	518.811229385458	90.062	0.6598	90.533	90.273	90.932	0.47068					30	16	2	0	0	0	0.73619	1	10688	10688		65.897	2.5912	1	1033500	+		48134	17199;16572;17235	32385	32398	54356	54356					0.09263701110694456
RIWVRLDIRRA	11	Unmodified	_RIWVRLDIRRA_					0	0	0		ENST00000373374.7_1_1:34673819-34684388:+|nuORF	ENST00000373374.7_1_1:34673819-34684388:+|nuORF	ENST00000373374.7_1_1:34673819-34684388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.6378173828125	3	485.300271	1452.87898	1.0097	0.00049003	3.7452	0.0018176	4.755	0.0023076	485.3020682659724	16.477	0.64601	16.554	16.427	17.073	0.07715					46	24	4	0	0	0	0.77205	1	99	99		17.167	7.0628	1	156250			48135	10744	32386	32399	54357	54357					0.17066009656241476
RIYNMEMARK	10	Unmodified	_RIYNMEMARK_					0	0	0		ENSG00000266472|ENST00000614145|MRPS21	ENSG00000266472|ENST00000614145|MRPS21	ENSG00000266472|ENST00000614145|MRPS21	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.25738525390625	3	437.893525	1310.65875	0.33171	0.00014525	-0.48536	-0.00021254	-0.15365	-6.7283E-05	437.8932483872008	30.577	0.56735	30.581	30.272	30.84	0.0037212					21	12	2	0	0	0	0.37624	1	2014	2014		41.109	25.102	1	253460			48136	8951	32387	32400	54358	54358					0.015842799421534437
RKAAAQQLG	9	Unmodified	_RKAAAQQLG_					0	0	0		ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.7762145996094	2	471.777608	941.540663	-0.40163	-0.00018948	0.75941	0.00035827	0.35778	0.00016879	471.77774525080497	27.985	0.39441	27.961	27.768	28.163	-0.023556					12	9	2	0	0	0	0.78058	1	1311	1311		30.504	2.2494	1	27196			48137	1730	32388	32401	54359	54359					0.06755411740186901
RKAELLLRLQ	10	Unmodified	_RKAELLLRLQ_					0	0	0		ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.9320983886719	3	413.934706	1238.78229	-1.8356	-0.0007598	-3.1712	-0.0013127	-5.0068	-0.0020725	413.93335322974514	43.048	2.0933	43.048	42.061	44.154	0					130	51	3	0	0	0	0.86207	1	3085	3085		24.232	6.3987	1	494810			48138	2234	32389	32402	54360	54360					0.1724502237645993
RKAELLLRLQ	10	Unmodified	_RKAELLLRLQ_					0	0	0		ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.93255615234375	3	413.934706	1238.78229	-1.0065	-0.00041663	-3.7709	-0.0015609	-4.7774	-0.0019775	413.93306098265026	44.954	2.5911	44.923	43.876	46.467	-0.031067					192	60	4	0	0	0	0.85633	2	3724	3707;3724		29.551	6.1728	1	748080			48139	2234	32389	32402	54361;54362	54362					0.1724502237645993
RKAELLLRLQ	10	Unmodified	_RKAELLLRLQ_					0	0	0		ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.932373046875	3	413.934706	1238.78229	-1.8924	-0.00078334	-2.7536	-0.0011398	-4.6461	-0.0019232	413.93347709098015	44.87	2.8248	44.882	43.566	46.391	0.012058					191	71	4	0	0	0	0.85086	1	3240	3240		19.263	0.73163	1	675440			48140	2234	32389	32402	54363	54363					0.1724502237645993
RKAEQPLQKAI	11	Unmodified	_RKAEQPLQKAI_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.3840942382812	2	641.385511	1280.75647	2.7088	0.0017374	-4.3584	-0.0027954	-1.6496	-0.001058	641.3824552667398	102.77	1.4212	102.72	102.34	103.76	-0.046997					84	34	4	0	0	0	0.65746	1	11214	11214		37.812	2.6595	1	1908400	+		48141	18606	32390	32403	54364	54364					0.12732128134166487
RKAERPRLK	9	Unmodified	_RKAERPRLK_					0	0	0			REV__ENST00000449707.5_1_2:219523523-219524103:-|nuORF	REV__ENST00000449707.5_1_2:219523523-219524103:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	577.366455078125	2	577.367456	1152.72036	0.74115	0.00042792	-2.508	-0.0014481	-1.7669	-0.0010201	577.3658570064985	102.18	2.9839	102.23	101.81	104.79	0.043198					214	72	5	0	0	0	0.7932	1	11194	11194		15.642	1.8665	1	10154000	+		48142	26858	32391	32404	54365	54365					0.15010715747962422
RKAFGFTL	8	Unmodified	_RKAFGFTL_					0	0	0			REV__ENST00000399438.7_2_5:64920774-64920858:+|nuORF	REV__ENST00000399438.7_2_5:64920774-64920858:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.2721252441406	2	470.27417	938.533787	-1.7118	-0.000805	-2.5944	-0.0012201	-4.3061	-0.0020251	470.2729404281299	92.166	2.8676	92.352	91.202	94.069	0.18582					129	67	3	0	0	0	0.87064	1	9301	9301		29.15	3.5755	1	1756700	+		48143	26224	32392	32405	54366	54366					0.06206098859627218
RKAGGQLH	8	Unmodified	_RKAGGQLH_					0	0	0			REV__chr12:6063458-6537101|30|21.17|0.0|21.01|+|0|None,GAPDH|1	REV__chr12:6063458-6537101|30|21.17|0.0|21.01|+|0|None,GAPDH|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7527770996094	2	433.751393	865.488233	-0.89842	-0.00038969	4.242	0.00184	3.3436	0.0014503	433.7530751140989	61.556	3.4273	61.944	61.394	64.821	0.38845					196	83	3	0	0	0	0.86288	1	6929	6929		26.796	2.5934	1	960390	+		48144	15551	32393	32406	54367	54367					0.050108733972138
RKAGLLVL	8	Unmodified	_RKAGLLVL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;ENST00000561199.5_1_14:24652794-24657993:-|nuORF;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.29974365234375	2	435.300188	868.585822	-1.3785	-0.00060007	1.5278	0.00066505	0.14927	6.4979E-05	435.30073733409733	75.396	1.3729	75.483	74.943	76.316	0.087639					63	36	2	0	0	0	0.80963	1	7031	7031		15.636	0.97212	1	527430			48145	8063	32394	32407	54368	54368					0.14627262273359065
RKAGLLVL	8	Unmodified	_RKAGLLVL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;ENST00000561199.5_1_14:24652794-24657993:-|nuORF;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002624511719	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.85228	2	7991	7955;7991		10.185	1.3624	1	5485100			48146	8063	32394	32407	54369;54370	54370					0.14627262273359065
RKAGPKPDRRA	11	Unmodified	_RKAGPKPDRRA_					0	0	0			REV__nc|ENSG00000205879|Q658T7-2|FAM90A2P	REV__nc|ENSG00000205879|Q658T7-2|FAM90A2P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3731079101562	2	626.373269	1250.73199	1.2701	0.00079556	4.3603	0.0027312	5.6304	0.0035268	626.3762557773946	44.91	0.84672	44.922	44.469	45.315	0.012058					41	19	3	0	0	0	0.73893	1	3209	3209		24.519	3.5723	1	186930	+		48147	21777	32395	32408	54371	54371					0.1166491277131172
RKAGRPKPR	9	Unmodified	_RKAGRPKPR_					0	0	0		ENST00000606662.1_1_5:115420534-115420723:-|nuORF	ENST00000606662.1_1_5:115420534-115420723:-|nuORF	ENST00000606662.1_1_5:115420534-115420723:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.34033203125	2	533.341241	1064.66793	-0.0064483	-3.4392E-06	-2.0623	-0.0010999	-2.0688	-0.0011034	533.3400284044101	98.996	2.9551	99.219	98.699	101.65	0.22262					166	70	4	0	0	0	0.7932	1	10363	10363		16.473	0.83134	1	2531600			48148	14452	32396	32409	54372	54372					0.13818177405005372
RKAKGHKG	8	Unmodified	_RKAKGHKG_					0	0	0		ENSG00000198780|ENST00000687041|FAM169A	ENSG00000198780|ENST00000687041|FAM169A	ENSG00000198780|ENST00000687041|FAM169A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.27264404296875	2	441.275035	880.535518	0.022734	1.0032E-05	-4.2612	-0.0018803	-4.2384	-0.0018703	441.27304767072025	52.937	0.86954	53.551	53.075	53.944	0.61436					37	20	2	0	0	0	0.79929	1	5360	5360		18.324	3.6603	1	1126100			48149	8330	32397	32410	54373	54373					0.09047152668233593
RKAKGHKG	8	Unmodified	_RKAKGHKG_					0	0	0		ENSG00000198780|ENST00000687041|FAM169A	ENSG00000198780|ENST00000687041|FAM169A	ENSG00000198780|ENST00000687041|FAM169A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	441.275035	880.535518	-0.33925	-0.0001497	-3.9746	-0.0017539	-4.3139	-0.0019036	441.27318175499244	53.147	0.99224	53.561	53.044	54.036	0.4139	0.0047198	0.00015782	NaN	18.324	41	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1087400			48150	8330	32397	32410							0.09047152668233593
RKAKLPPF	8	Unmodified	_RKAKLPPF_					0	0	0		ENSG00000179627|ENST00000342537|ZBTB42	ENSG00000179627|ENST00000342537|ZBTB42	ENSG00000179627|ENST00000342537|ZBTB42	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8052673339844	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.792	1	42.757	42.257	43.257	-0.035816								0	0	0	0.29568	1	3312	3312		35.201	8.4046	1				48151	7285	32398	32411	54374	54374					0.11714664647649897
RKAKLPPF	8	Unmodified	_RKAKLPPF_					0	0	0		ENSG00000179627|ENST00000342537|ZBTB42	ENSG00000179627|ENST00000342537|ZBTB42	ENSG00000179627|ENST00000342537|ZBTB42	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8058166503906	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.72	1	42.725	42.225	43.225	0.0057487								0	0	0	0.29498	1	2893	2893		26.796	1.3459	1				48152	7285	32398	32411	54375	54375					0.11714664647649897
RKALALWAP	9	Unmodified	_RKALALWAP_					0	0	0			REV__ENSG00000109265|ENST00000682029|CRACD	REV__ENSG00000109265|ENST00000682029|CRACD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.31591796875	2	513.316369	1024.61818	-0.35462	-0.00018203	1.0148	0.00052089	0.66014	0.00033886	513.3169096731813	53.695	2.201	53.717	52.714	54.915	0.022537					86	65	3	0	0	0	0.7932	1	4778	4778		18.324	0	1	230160	+		48153	17753	32399	32412	54376	54376					0.10686049676337461
RKALHGDS	8	Unmodified	_RKALHGDS_					0	0	0			REV__ENSG00000158428|ENST00000289388|CATIP	REV__ENSG00000158428|ENST00000289388|CATIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.240478515625	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.91005	1	8202	8202		42.474	3.6683	1	1068200	+		48154	20605	32400	32413	54377	54377					0.021228632977113193
RKALKELANLL	11	Unmodified	_RKALKELANLL_					0	0	0			REV__ENSG00000204010|ENST00000371809|IFIT1B	REV__ENSG00000204010|ENST00000371809|IFIT1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.376953125	2	634.906079	1267.79761	2.1839	0.0013866	-0.56121	-0.00035632	1.6227	0.0010303	634.906201478878	109.96	1.2811	110.01	109.63	110.91	0.054062					69	51	2	0	0	0	0.1728	1	13382	13382		24.519	0	1	949290	+		48155	23451	32401	32414	54378	54378					0.17441889173642267
RKALKSGKMT	10	Unmodified	_RKALKSGKMT_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3378295898438	2	560.336975	1118.6594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.37	1	116.43	115.93	116.93	0.059448								0	0	0	0.45132	1	12359	12359		15.642	0.97771	1				48156	2924	32402	32415	54379	54379					0.10481442653531303
RKALKVKRP	9	Unmodified	_RKALKVKRP_					0	0	0		ENST00000468775.1_1_2:11591697-11606038:-|nuORF;nc|ENSG00000169016|O75461-3|E2F6;ENSG00000169016|ENST00000381525|E2F6	ENST00000468775.1_1_2:11591697-11606038:-|nuORF	ENST00000468775.1_1_2:11591697-11606038:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3743286132812	2	548.377292	1094.74003	-1.4257	-0.00078185	-3.9799	-0.0021825	-5.4057	-0.0029643	548.3749403834641	37.356	2.5025	37.356	35.98	38.483	0					111	59	3	0	0	0	0.7932	1	2194	2194		17.365	4.4058	1	203100			48157	6457	32403	32416	54380	54380					0.19645091758729905
RKALLIVG	8	Unmodified	_RKALLIVG_					0	0	0		ENSG00000198883|ENST00000535214|PNMA5	ENSG00000198883|ENST00000535214|PNMA5	ENSG00000198883|ENST00000535214|PNMA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3000183105469	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.83466	1	7140	7140		23.037	1.3344	1	1680500			48158	8356	32404	32417	54381	54381					0.14627262273359065
RKALLIVG	8	Unmodified	_RKALLIVG_					0	0	0		ENSG00000198883|ENST00000535214|PNMA5	ENSG00000198883|ENST00000535214|PNMA5	ENSG00000198883|ENST00000535214|PNMA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3003234863281	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.90024	1	8680	8680		39.021	17.319	1	5485100			48159	8356	32404	32417	54382	54382					0.14627262273359065
RKALRQVGLAL	11	Unmodified	_RKALRQVGLAL_					0	0	0			REV__ENSG00000183665|ENST00000328599|TRMT12	REV__ENSG00000183665|ENST00000328599|TRMT12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.9338684082031	3	408.934818	1223.78262	-1.9388	-0.00079284	-0.054927	-2.2462E-05	-1.9937	-0.0008153	408.93476832528296	16.248	0.87597	16.296	16.053	16.929	0.047802					86	39	4	0	0	0	0.76251	1	132	132		19.263	1.7947	1	909210	+		48160	22619	32405	32418	54383	54383					0.1796844209632127
RKALVILG	8	Unmodified	_RKALVILG_					0	0	0		ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3002014160156	2	435.300188	868.585822	-0.33292	-0.00014492	0.65367	0.00028454	0.32075	0.00013962	435.30030600334584	75.563	1.7203	75.517	74.991	76.711	-0.045975					102	48	3	0	0	0	0.81724	1	7403	7403		14.664	0	1	492420			48161	1556	32406	32419	54384	54384					0.14627262273370434
RKALVILG	8	Unmodified	_RKALVILG_					0	0	0		ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3001708984375	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.81724	1	6659	6659		14.664	0	1	1852500			48162	1556	32406	32419	54385	54385					0.14627262273370434
RKAMTKLGSK	10	Unmodified	_RKAMTKLGSK_					0	0	0		ENSG00000103888|ENST00000394685|CEMIP;nc|ENSG00000103888|Q8WUJ3-2|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3416137695312	2	560.336975	1118.6594	3.1454	0.0017625	2.8555	0.0016	6.0009	0.0033625	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.86106	1	12883	12883		33.922	1.1092	1	151040			48163	2104	32407	32420	54386	54386					0.10481442653531303
RKAPACRR	8	Unmodified	_RKAPACRR_					0	0	0		ENST00000585362.6_3_19:1104424-1105401:+|nuORF	ENST00000585362.6_3_19:1104424-1105401:+|nuORF	ENST00000585362.6_3_19:1104424-1105401:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2778625488281	2	479.279795	956.545037	-1.4767	-0.00070776	-3.6223	-0.0017361	-5.099	-0.0024439	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.87922	1	7758	7758		31.955	6.5047	1	1785900			48164	14145	32408	32421	54387	54387					0.06502597682094802
RKAPKKKLPQK	11	Unmodified	_RKAPKKKLPQK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.2998352050781	3	441.297868	1320.87177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.227	1	19.597	19.097	20.097	-0.6296								0	0	0	0.56276	1	624	624		23.378	7.3711	1				48165	7176	32409	32422	54388	54388					0.22417277055819795
RKAQKKSA	8	Unmodified	_RKAQKKSA_					0	0	0			REV__nc|ENSG00000180228|O75569-3|PRKRA	REV__nc|ENSG00000180228|O75569-3|PRKRA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	458.78765869140625	2	458.787976	915.561398	-1.0758	-0.00049355	0.12952	5.9424E-05	-0.94624	-0.00043412	458.7880145411106	93.372	3.7853	93.372	92.851	96.637	0					181	88	4	0	0	0	0.85277	1	9271	9271		25.45	0	1	6725700	+		48166	22381	32410	32423	54389	54389					0.10024002119848774
RKARFAKLKWL	11	Unmodified	_RKARFAKLKWL_					0	0	0		ENST00000503687.2_2_7:66094097-66236887:+|nuORF	ENST00000503687.2_2_7:66094097-66236887:+|nuORF	ENST00000503687.2_2_7:66094097-66236887:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.9707946777344	3	472.969863	1415.88776	0.051384	2.4303E-05	2.1773	0.0010298	2.2286	0.0010541	472.97087077601634	49.142	2.3722	49.137	48.43	50.803	-0.0056381					193	58	5	0	0	0	0.79224	1	4088	4088		12.957	0.52465	1	1340700			48167	12890	32411	32424	54390	54390					0.19644983292732832
RKARILIPTDP	11	Unmodified	_RKARILIPTDP_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.8966064453125	2	640.395879	1278.7772	-0.0023581	-1.5101E-06	-4.369	-0.0027979	-4.3714	-0.0027994	640.3930794229678	53.7	0.84142	53.695	53.277	54.118	-0.0053711					48	20	3	0	0	0	0.73893	1	4714	4714		24.519	0	1	158160	+		48168	22575	32412	32425	54391	54391					0.14896718513841734
RKARKTKIT	9	Unmodified	_RKARKTKIT_					0	0	0		nc|ENSG00000114439|Q8WY36-2|BBX;ENSG00000114439|ENST00000325805|BBX	nc|ENSG00000114439|Q8WY36-2|BBX	nc|ENSG00000114439|Q8WY36-2|BBX	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	551.363525390625	2	551.364382	1100.71421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.876	1	15.852	15.352	16.352	-0.024035								0	0	0	0.32159	1	84	84		23.042	6.5693	1				48169	2770	32413	32426	54392	54392					0.1678819751643914
RKARRLPRNRL	11	Unmodified	_RKARRLPRNRL_					0	0	0		ENST00000602101.6_1_19:15568751-15575169:-|nuORF	ENST00000602101.6_1_19:15568751-15575169:-|nuORF	ENST00000602101.6_1_19:15568751-15575169:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.30914306640625	3	479.311282	1434.91202	-0.63549	-0.0003046	-4.2236	-0.0020244	-4.8591	-0.002329	479.30917580991905	52.514	1.6934	52.49	51.325	53.018	-0.023849					51	40	2	0	0	0	0.7896	1	4688	4688		13.508	1.0751	1	106560			48170	14398	32414	32427	54393	54393					0.21195636498964632
RKARRLPRNRL	11	Unmodified	_RKARRLPRNRL_					0	0	0		ENST00000602101.6_1_19:15568751-15575169:-|nuORF	ENST00000602101.6_1_19:15568751-15575169:-|nuORF	ENST00000602101.6_1_19:15568751-15575169:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3046569824219	3	479.311282	1434.91202	-2.1416	-0.0010265	-2.5243	-0.0012099	-4.6658	-0.0022364	479.3100387681763	58.955	1.0833	58.989	58.521	59.604	0.033905					44	31	2	0	0	0	0.79476	1	5447	5447		12.433	3.221	1	84700			48171	14398	32414	32427	54394	54394					0.21195636498964632
RKASKPISD	9	Unmodified	_RKASKPISD_					0	0	0		nc|ENSG00000143033|Q9Y483-3|MTF2;ENSG00000143033|ENST00000370298|MTF2;nc|ENSG00000143033|Q9Y483-2|MTF2	nc|ENSG00000143033|Q9Y483-3|MTF2	nc|ENSG00000143033|Q9Y483-3|MTF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29046630859375	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.77244	1	9295	9295		32.812	0.85756	1	9883700			48172	4596	32415	32428	54395	54395					0.06628261191792717
RKAVLVAL	8	Unmodified	_RKAVLVAL_					0	0	0		ENST00000461328.1_1_6:31750305-31750407:-|nuORF;ENSG00000204394|ENST00000375663|VARS1	ENST00000461328.1_1_6:31750305-31750407:-|nuORF	ENST00000461328.1_1_6:31750305-31750407:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3003845214844	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.85787	1	6533	6533		9.4706	0	1	1072400			48173	8439	32416	32429	54396	54396					0.14627262273359065
RKAVLVAL	8	Unmodified	_RKAVLVAL_					0	0	0		ENST00000461328.1_1_6:31750305-31750407:-|nuORF;ENSG00000204394|ENST00000375663|VARS1	ENST00000461328.1_1_6:31750305-31750407:-|nuORF	ENST00000461328.1_1_6:31750305-31750407:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.30029296875	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.82419	1	6688	6688		13.775	0	1	1819800			48174	8439	32416	32429	54397	54397					0.14627262273359065
RKAVLVAL	8	Unmodified	_RKAVLVAL_					0	0	0		ENST00000461328.1_1_6:31750305-31750407:-|nuORF;ENSG00000204394|ENST00000375663|VARS1	ENST00000461328.1_1_6:31750305-31750407:-|nuORF	ENST00000461328.1_1_6:31750305-31750407:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3000183105469	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81724	1	8526	8526		14.664	0	1	6323600			48175	8439	32416	32429	54398	54398					0.14627262273359065
RKAYKYLA	8	Unmodified	_RKAYKYLA_					0	0	0		ENSG00000101997|ENST00000376227|CCDC22	ENSG00000101997|ENST00000376227|CCDC22	ENSG00000101997|ENST00000376227|CCDC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.80047607421875	2	506.800552	1011.58655	-0.4843	-0.00024544	2.1408	0.001085	1.6565	0.00083952	506.8016364988691	53.923	1.2683	53.971	53.181	54.449	0.047802					71	44	2	0	0	0	0.80706	1	4386	4386		19.36	1.0356	1	157540			48176	1979	32417	32430	54399	54399					0.08122056922400134
RKCKKYVKY	9	Unmodified	_RKCKKYVKY_					0	0	0			REV__nc|ENSG00000158055|Q8TE85-4|GRHL3	REV__nc|ENSG00000158055|Q8TE85-4|GRHL3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.3532104492188	2	608.355168	1214.69578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.451	1	65.451	64.951	65.951	0								0	0	0	0.30778	1	5774	5774		27.882	1.1893	1		+		48177	20583	32418	32431	54400	54400					0.09702319550228822
RKCPVPSA	8	Unmodified	_RKCPVPSA_					0	0	0		ENST00000378426.5_2_X:40506367-40506781:-|nuORF	ENST00000378426.5_2_X:40506367-40506781:-|nuORF	ENST00000378426.5_2_X:40506367-40506781:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.23577880859375	2	429.23673	856.458907	-1.7002	-0.00072977	-0.63366	-0.00027199	-2.3338	-0.0010018	429.23632496484737	63.188	2.3667	63.302	62.678	65.045	0.11389					282	104	4	0	0	0	0.89494	1	5557	5557		37.159	0	1	6358600			48178	10865	32419	32432	54401	54401					0.02493593056726695
RKDFHKTLPKQ	11	Unmodified	_RKDFHKTLPKQ_					0	0	0		nc|ENSG00000107099|Q8NF50-4|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;ENSG00000107099|ENST00000432829|DOCK8;ENST00000478380.5_1_9:286487-312499:+|nuORF;ENST00000454469.6_1_9:214976-340322:+|nuORF;ENST00000495184.5_1_9:286487-368312:+|nuORF	nc|ENSG00000107099|Q8NF50-4|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.6077880859375	3	466.605249	1396.79392	2.578	0.0012029	3.3971	0.0015851	5.9751	0.002788	466.60668985200886	100.48	2.1594	100.43	99.202	101.36	-0.052116					162	50	4	0	0	0	0.72374	1	10849	10849		27.644	10.477	1	531470			48179	2330	32420	32433	54402	54402					0.11139219399797184
RKDPKRFSTG	10	Unmodified	_RKDPKRFSTG_					0	0	0			REV__ENST00000509124.5_1_17:47866196-47893226:+|nuORF	REV__ENST00000509124.5_1_17:47866196-47893226:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3326416015625	2	596.333279	1190.652	-0.57959	-0.00034563	-0.049534	-2.9539E-05	-0.62912	-0.00037517	596.3331084008277	96.35	3.5496	96.416	95.306	98.855	0.06591					255	82	4	0	0	0	0.57924	1	10063	10063		51.193	16.041	1	1242500	+		48180	27937	32421	32434	54403	54403					0.06430426377460208
RKDQLVPE	8	Unmodified	_RKDQLVPE_					0	0	0			REV__ENSG00000145041|ENST00000684031|DCAF1	REV__ENSG00000145041|ENST00000684031|DCAF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79541015625	2	492.777274	983.539994	-1.1079	-0.00054597	3.853	0.0018987	2.7451	0.0013527	492.7789861958335	44.735	0.65609	45.579	45.339	45.995	0.84438					27	15	2	0	0	0	0.4196	1	4117	4117		26.693	0	1	347790	+		48181	19924	32422	32435	54404	54404					0.04756572300470907
RKDVRRPG	8	Unmodified	_RKDVRRPG_					0	0	0			REV__ENST00000468365.1_1_1:1178728-1179534:-|nuORF	REV__ENST00000468365.1_1_1:1178728-1179534:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.2995910644531	2	492.296499	982.578445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.947	1	67.074	66.574	67.574	0.12649								0	0	0	0.29619	1	5967	5967		25.574	2.5316	1		+		48182	22649	32423	32436	54405	54405					0.08645922725656874
RKDYEKICLKY	11	Carbamidomethyl (C)	_RKDYEKIC(Carbamidomethyl (C))LKY_	RKDYEKIC(1)LKY		RKDYEKIC(42)LKY		0	1	0		nc|ENSG00000163395|Q86VF2-4|IGFN1;nc|ENSG00000163395|Q86VF2|IGFN1;ENSG00000163395|ENST00000335211|IGFN1	nc|ENSG00000163395|Q86VF2-4|IGFN1	nc|ENSG00000163395|Q86VF2-4|IGFN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.93988037109375	3	505.937788	1514.79153	0.70233	0.00035534	3.4808	0.001761	4.1831	0.0021164	505.9395195781461	62.078	1.1683	62.633	62.257	63.425	0.55449					88	26	5	0	0	0	0.61824	1	6663	6663		42.338	13.761	1	1470300			48183	5793	32424	32437	54406	54406	73				0.054730028798303465
RKEAIQAWSGD	11	Unmodified	_RKEAIQAWSGD_					0	0	0			REV__nc|ENSG00000162729|Q969P0-3|IGSF8	REV__nc|ENSG00000162729|Q969P0-3|IGSF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	630.8192138671875	2	630.820201	1259.62585	-0.46369	-0.00029251	-3.8527	-0.0024303	-4.3164	-0.0027228	630.8185435190518	63.949	0.7281	63.976	63.711	64.439	0.027142					34	20	2	0	0	0	0.638	1	6000	6000		40.058	0.18502	1	131030	+		48184	20841	32425	32438	54407	54407					0.0064211241528937535
RKEARILLQL	10	Unmodified	_RKEARILLQL_					0	0	0		ENST00000542678.5_2_12:123464691-123464859:-|nuORF	ENST00000542678.5_2_12:123464691-123464859:-|nuORF	ENST00000542678.5_2_12:123464691-123464859:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.9322509765625	3	413.934706	1238.78229	-1.8077	-0.00074828	-2.9541	-0.0012228	-4.7618	-0.0019711	413.9334753019912	44.718	2.8382	44.718	44.154	46.992	0					147	70	3	0	0	0	0.86106	1	3382	3382		33.922	4.7516	1	588320			48185	13540	32426	32439	54408	54408					0.17245022376482666
RKEAVSVLDS	10	Unmodified	_RKEAVSVLDS_					0	0	0		ENSG00000269313|ENST00000595224|MAGIX	ENSG00000269313|ENST00000595224|MAGIX	ENSG00000269313|ENST00000595224|MAGIX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3059692382812	2	552.306395	1102.59824	1.2817	0.0007079	-1.3256	-0.00073213	-0.043866	-2.4228E-05	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.86218	1	9795	9795		32.812	3.6424	1	1712700			48186	8968	32427	32440	54409	54409					0.05104209155092576
RKEEARRGPT	10	Unmodified	_RKEEARRGPT_					0	0	0			REV__chr3:108430922-108437554|33|17.39|0.57|4.93|-|0|MYH15,MYH15|1	REV__chr3:108430922-108437554|33|17.39|0.57|4.93|-|0|MYH15,MYH15|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	600.3341064453125	2	600.33381	1198.65307	2.3588	0.0014161	-2.5944	-0.0015575	-0.23553	-0.00014139	600.3322451501099	94.355	2.7014	94.296	92.89	95.591	-0.059204					137	64	3	0	0	0	0.86218	1	10034	10034		32.812	8.6097	1	661970	+		48187	15799	32428	32441	54410	54410					0.061686407463639625
RKEEARRGPT	10	Unmodified	_RKEEARRGPT_					0	0	0			REV__chr3:108430922-108437554|33|17.39|0.57|4.93|-|0|MYH15,MYH15|1	REV__chr3:108430922-108437554|33|17.39|0.57|4.93|-|0|MYH15,MYH15|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	600.3330688476562	2	600.33381	1198.65307	0.97496	0.0005853	-0.89695	-0.00053847	0.078005	4.6829E-05	600.3333001736194	93.972	2.6072	94.2	93.361	95.968	0.22863					134	62	3	0	0	0	0.82886	1	9608	9608		37.812	0.65241	1	602950	+		48188	15799	32428	32441	54411	54411					0.061686407463639625
RKEGEFYPD	9	Unmodified	_RKEGEFYPD_					0	0	0		nc|ENSG00000171502|Q17RW2-2|COL24A1;ENSG00000171502|ENST00000370571|COL24A1	nc|ENSG00000171502|Q17RW2-2|COL24A1	nc|ENSG00000171502|Q17RW2-2|COL24A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	571.2733154296875	2	570.769645	1139.52474	-0.20834	-0.00011891	2.8366	0.0016191	2.6283	0.0015001	570.7714135024667	59.12	1.8858	59.154	58.468	60.353	0.033905					84	53	2	0	0	0	0.67345	1	5422	5422		42.396	3.1433	1	117990			48189	6675	32429	32442	54412	54412					-0.03944339287386356
RKEICKFYL	9	Unmodified	_RKEICKFYL_					0	0	0		ENSG00000188177|ENST00000409871|ZC3H6	ENSG00000188177|ENST00000409871|ZC3H6	ENSG00000188177|ENST00000409871|ZC3H6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	600.3334350585938	2	600.333901	1198.65325	0.84167	0.00050528	-0.65745	-0.00039469	0.18422	0.00011059	600.3333552176359	94.081	3.1031	94.242	93.043	96.146	0.16119					126	74	2	0	0	0	0.7932	1	9611	9611		26.693	0	1	621100			48190	7913	32430	32443	54413	54413					0.06186924422013362
RKEKRKHARVK	11	Unmodified	_RKEKRKHARVK_					0	0	0		nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-3|CDK11B	nc|ENSG00000248333|P21127-6|CDK11B	nc|ENSG00000248333|P21127-6|CDK11B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3082275390625	3	479.307537	1434.90078	0.28128	0.00013482	1.1941	0.00057234	1.4754	0.00070716	479.3079813908047	43.232	1.6002	43.205	42.248	43.848	-0.026764					59	38	2	0	0	0	0.75457	1	3326	3326		21.032	2.5012	1	284320			48191	15285	32431	32444	54414	54414					0.20072814404807104
RKEKRKHARVK	11	Unmodified	_RKEKRKHARVK_					0	0	0		nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-3|CDK11B	nc|ENSG00000248333|P21127-6|CDK11B	nc|ENSG00000248333|P21127-6|CDK11B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3094787597656	3	479.307537	1434.90078	0.025082	1.2022E-05	3.0486	0.0014612	3.0737	0.0014732	479.308928067406	50.56	0.83576	50.558	49.913	50.749	-0.0020447					36	21	2	0	0	0	0.79224	1	4290	4290		12.957	1.3216	1	105480			48192	15285	32431	32444	54415	54415					0.20072814404807104
RKELDKLVN	9	Unmodified	_RKELDKLVN_					0	0	0			REV__ENSG00000152818|ENST00000367545|UTRN	REV__ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.8301391601562	2	557.83258	1113.65061	-0.43888	-0.00024482	-2.64	-0.0014727	-3.0789	-0.0017175	557.8312098012074	101.3	1.4308	101.3	100.82	102.25	0					75	34	3	0	0	0	0.78983	1	10315	10315		27.882	2.3082	1	522930	+		48193	20318	32432	32445	54416	54416					0.09832792288693781
RKELQSLRNRK	11	Unmodified	_RKELQSLRNRK_					0	0	0		ENSG00000070269|ENST00000261556|TMEM260	ENSG00000070269|ENST00000261556|TMEM260	ENSG00000070269|ENST00000261556|TMEM260	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.62298583984375	3	476.623303	1426.84808	2.8112	0.0013399	-1.9889	-0.00094794	0.82234	0.00039195	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.78683	1	12474	12474		14.086	1.6532	1	2689700			48194	1236	32433	32446	54417	54417					0.1517281155136061
RKEQTLLKQLP	11	Unmodified	_RKEQTLLKQLP_					0	0	0		nc|ENSG00000118200|Q08AD1-2|CAMSAP2;ENSG00000118200|ENST00000358823|CAMSAP2;nc|ENSG00000118200|Q08AD1|CAMSAP2	nc|ENSG00000118200|Q08AD1-2|CAMSAP2	nc|ENSG00000118200|Q08AD1-2|CAMSAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9430236816406	3	451.945271	1352.81398	-0.53384	-0.00024127	-4.227	-0.0019104	-4.7608	-0.0021516	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.72374	1	4324	4324		27.644	4.266	1	920720			48195	3017	32434	32447	54418	54418					0.15168970339755106
RKERGLPVLVE	11	Unmodified	_RKERGLPVLVE_					0	0	0		nc|ENSG00000099889|O00192-2|ARVCF;ENSG00000099889|ENST00000263207|ARVCF;ENST00000495096.5_1_22:19958242-19966598:-|nuORF	nc|ENSG00000099889|O00192-2|ARVCF	nc|ENSG00000099889|O00192-2|ARVCF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.5979309082031	3	432.597983	1294.77212	-0.96173	-0.00041604	1.3295	0.00057514	0.36778	0.0001591	432.5984432488919	107.49	0.99143	107.49	106.84	107.83	0					54	23	3	0	0	0	0.70737	1	11197	11197		21.032	0.71722	1	9853300			48196	1773	32435	32448	54419	54419					0.13652414651232903
RKERGLPVLVE	11	Unmodified	_RKERGLPVLVE_					0	0	0		nc|ENSG00000099889|O00192-2|ARVCF;ENSG00000099889|ENST00000263207|ARVCF;ENST00000495096.5_1_22:19958242-19966598:-|nuORF	nc|ENSG00000099889|O00192-2|ARVCF	nc|ENSG00000099889|O00192-2|ARVCF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5978698730469	3	432.597983	1294.77212	2.4108	0.0010429	-2.4605	-0.0010644	-0.04966	-2.1483E-05	432.5968710757986	107.1	1.2973	107.13	106.67	107.97	0.035622					60	30	2	0	0	0	0.77061	1	11832	11832		11.455	0	1	18390000			48197	1773	32435	32448	54420	54420					0.13652414651232903
RKERGLPVLVE	11	Unmodified	_RKERGLPVLVE_					0	0	0		nc|ENSG00000099889|O00192-2|ARVCF;ENSG00000099889|ENST00000263207|ARVCF;ENST00000495096.5_1_22:19958242-19966598:-|nuORF	nc|ENSG00000099889|O00192-2|ARVCF	nc|ENSG00000099889|O00192-2|ARVCF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5979309082031	3	432.597983	1294.77212	-1.5719	-0.00068002	0.90427	0.00039118	-0.66768	-0.00028884	432.5984109358272	105.99	1.0468	106.14	105.65	106.69	0.14843					117	25	6	0	0	0	0.78309	1	11341	11341		9.2118	0	1	44749000			48198	1773	32435	32448	54421	54421					0.13652414651232903
RKERGLPVLVE	11	Unmodified	_RKERGLPVLVE_					0	0	0		nc|ENSG00000099889|O00192-2|ARVCF;ENSG00000099889|ENST00000263207|ARVCF;ENST00000495096.5_1_22:19958242-19966598:-|nuORF	nc|ENSG00000099889|O00192-2|ARVCF	nc|ENSG00000099889|O00192-2|ARVCF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5976867675781	3	432.597983	1294.77212	-1.5737	-0.00068079	1.9561	0.00084622	0.3824	0.00016543	432.59875141375613	106.97	1.3878	107.11	106.64	108.03	0.13866					68	34	2	0	0	0	0.75921	1	11546	11546		12.957	0	1	21235000			48199	1773	32435	32448	54422	54422					0.13652414651232903
RKERGLPVLVE	11	Unmodified	_RKERGLPVLVE_					0	0	0		nc|ENSG00000099889|O00192-2|ARVCF;ENSG00000099889|ENST00000263207|ARVCF;ENST00000495096.5_1_22:19958242-19966598:-|nuORF	nc|ENSG00000099889|O00192-2|ARVCF	nc|ENSG00000099889|O00192-2|ARVCF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.59771728515625	3	432.597983	1294.77212	-1.8325	-0.00079275	2.3285	0.0010073	0.49597	0.00021455	432.598847314963	107.12	1.3043	107.16	106.63	107.93	0.036118					117	31	6	0	0	0	0.75921	1	11385	11385		12.957	0	1	10726000			48200	1773	32435	32448	54423	54423					0.13652414651232903
RKERTPGT	8	Unmodified	_RKERTPGT_					0	0	0		ENST00000372642.4_1_9:131580754-131580841:+|nuORF	ENST00000372642.4_1_9:131580754-131580841:+|nuORF	ENST00000372642.4_1_9:131580754-131580841:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.76708984375	2	472.76724	943.519927	-0.41041	-0.00019403	0.54101	0.00025577	0.1306	6.1745E-05	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.8347	2	8408	8396;8408		33.516	3.0119	1	590200			48201	10709	32436	32449	54424;54425	54425					0.04590821360534392
RKESIIKSE	9	Unmodified	_RKESIIKSE_					0	0	0		ENSG00000174705|ENST00000311601|SH3PXD2B	ENSG00000174705|ENST00000311601|SH3PXD2B	ENSG00000174705|ENST00000311601|SH3PXD2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.31787109375	2	545.316763	1088.61897	1.1684	0.00063715	-1.2999	-0.00070886	-0.1315	-7.1708E-05	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.78124	1	8889	8889		30.318	4.8675	1	4705800			48202	6955	32437	32450	54426	54426					0.07820799534783873
RKESSNTD	8	Unmodified	_RKESSNTD_					0	0	0		ENSG00000164867|ENST00000297494|NOS3	ENSG00000164867|ENST00000297494|NOS3	ENSG00000164867|ENST00000297494|NOS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232360839844	2	468.722695	935.430838	-1.9165	-0.00089829	3.0142	0.0014128	1.0978	0.00051454	468.7241207550591	90.104	1.871	90.574	90.243	92.114	0.47068					100	46	4	0	0	0	0.89962	1	10720	10720		38.806	5.2906	1	6559600			48203	6013	32438	32451	54427	54427					-0.03946058389658447
RKEVARRLLT	10	Unmodified	_RKEVARRLLT_					0	0	0			REV__ENSG00000240694|ENST00000522362|PNMA2	REV__ENSG00000240694|ENST00000522362|PNMA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3930053710938	2	621.39367	1240.77279	-1.2196	-0.00075786	-0.45293	-0.00028145	-1.6726	-0.0010393	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.85251	1	11114	11114		19.997	0	1	23459000	+		48204	23813	32439	32452	54428	54428					0.1620325409094221
RKEVKLPGKGK	11	Unmodified	_RKEVKLPGKGK_					0	0	0		nc|ENSG00000127483|Q5SSJ5-3|HP1BP3;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;ENSG00000127483|ENST00000438032|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.9324645996094	3	413.934706	1238.78229	-1.0065	-0.00041663	-3.7709	-0.0015609	-4.7774	-0.0019775	413.93306098265026	44.954	2.5911	44.923	43.876	46.467	-0.031067					192	60	4	0	0	0	0.77205	1	3533	3533		17.167	0.44936	1	748080			48205	3500	32440	32453	54429	54429					0.1724502237645993
RKEVKWLHLGV	11	Unmodified	_RKEVKWLHLGV_					0	0	0			REV__ENST00000483602.1_1_2:241534571-241535939:+|nuORF	REV__ENST00000483602.1_1_2:241534571-241535939:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6083984375	3	455.610223	1363.80884	-1.2148	-0.00055347	-2.8267	-0.0012879	-4.0415	-0.0018414	455.6088555000252	68.308	1.0125	68.443	67.92	68.932	0.13521					65	38	2	0	0	0	0.73621	1	6117	6117		25.126	0.89417	1	184950	+		48206	19738	32441	32454	54430	54430					0.14148711267785075
RKEVKWLHLGV	11	Unmodified	_RKEVKWLHLGV_					0	0	0			REV__ENST00000483602.1_1_2:241534571-241535939:+|nuORF	REV__ENST00000483602.1_1_2:241534571-241535939:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.942138671875	3	455.610223	1363.80884	-0.02024	-9.2214E-06	-3.9525	-0.0018008	-3.9727	-0.00181	455.608304720296	65.806	3.5163	66.359	63.877	67.393	0.5526					173	94	4	0	0	0	0.732	2	7167	7045;7167		26.063	3.5018	1	1863500	+		48207	19738	32441	32454	54431;54432	54432					0.14148711267785075
RKEVREQPKL	10	Unmodified	_RKEVREQPKL_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8834838867188	2	641.883136	1281.75172	-0.050098	-3.2157E-05	-0.96956	-0.00062234	-1.0197	-0.0006545	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.86106	1	10506	10506		33.922	4.7516	1	3644700	+		48208	20602	32442	32455	54433	54433					0.12211243991418996
RKFDPRLRQVL	11	Unmodified	_RKFDPRLRQVL_					0	0	0			REV__ENSG00000011198|ENST00000644371|ABHD5	REV__ENSG00000011198|ENST00000644371|ABHD5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.62408447265625	3	476.624643	1426.8521	-0.84023	-0.00040047	-1.2163	-0.0005797	-2.0565	-0.00098017	476.62395766938414	107.8	0.76151	107.8	107.11	107.87	0					44	18	5	0	0	0	0.76579	1	11217	11217		18.531	0	1	82361000	+		48209	16179	32443	32456	54434	54434					0.15574901045056322
RKFDPRLRQVL	11	Unmodified	_RKFDPRLRQVL_					0	0	0			REV__ENSG00000011198|ENST00000644371|ABHD5	REV__ENSG00000011198|ENST00000644371|ABHD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6241760253906	3	476.624643	1426.8521	-1.6911	-0.00080602	-0.098144	-4.6778E-05	-1.7893	-0.0008528	476.6245112219867	107.85	0.64255	107.89	107.33	107.97	0.036118					45	15	6	0	0	0	0.76579	1	11530	11530		18.531	2.6104	1	137120000	+		48210	16179	32443	32456	54435	54435					0.15574901045056322
RKFDPRLRQVL	11	Unmodified	_RKFDPRLRQVL_					0	0	0			REV__ENSG00000011198|ENST00000644371|ABHD5	REV__ENSG00000011198|ENST00000644371|ABHD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62408447265625	3	476.624643	1426.8521	-1.6911	-0.00080601	-0.051328	-2.4464E-05	-1.7424	-0.00083048	476.6245636799804	113.21	0.20975	113.18	113.01	113.22	-0.032333					10	5	3	0	0	0	0.77205	1	12085	12085		17.167	5.2344	1	1513300	+		48211	16179	32443	32456	54436	54436					0.15574901045056322
RKFDPRLRQVL	11	Unmodified	_RKFDPRLRQVL_					0	0	0			REV__ENSG00000011198|ENST00000644371|ABHD5	REV__ENSG00000011198|ENST00000644371|ABHD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6239318847656	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.79224	2	12243	12243;12964		12.957	2.2428	1	2577100	+		48212	16179	32443	32456	54437;54438	54437					0.15574901045056322
RKFFVAKS	8	Unmodified	_RKFFVAKS_					0	0	0			REV__ENST00000397747.4_1_9:5557645-5569982:+|nuORF	REV__ENST00000397747.4_1_9:5557645-5569982:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.2978515625	2	491.795269	981.575986	-0.080821	-3.9747E-05	1.1996	0.00058995	1.1188	0.0005502	491.7960401944478	66.981	1.1041	66.997	66.508	67.612	0.016197					82	51	2	0	0	0	0.84341	1	6329	6329		24.203	0	1	81064	+		48213	26177	32444	32457	54439	54439					0.08446074267999393
RKFFVAKS	8	Unmodified	_RKFFVAKS_					0	0	0			REV__ENST00000397747.4_1_9:5557645-5569982:+|nuORF	REV__ENST00000397747.4_1_9:5557645-5569982:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79522705078125	2	491.795269	981.575986	-0.72436	-0.00035624	0.93415	0.00045941	0.20979	0.00010317	491.79558867203156	43.471	1.2464	43.477	42.933	44.179	0.0057487					50	30	2	0	0	0	0.84341	1	2975	2975		24.203	0	1	198180	+		48214	26177	32444	32457	54440	54440					0.08446074267999393
RKFIKAPP	8	Unmodified	_RKFIKAPP_					0	0	0		chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3;nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3;ENST00000509177.1_1_8:15480615-15508356:+|nuORF	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8037109375	2	478.805637	955.596721	0.18646	8.928E-05	0.43935	0.00021037	0.62582	0.00029964	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.81548	1	2896	2896		20.482	0	1	371600			48215	512	32445	32458	54441	54441					0.11714664647661266
RKFIKAPP	8	Unmodified	_RKFIKAPP_					0	0	0		chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3;nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3;ENST00000509177.1_1_8:15480615-15508356:+|nuORF	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8047790527344	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.417	1	42.388	41.888	42.888	-0.029461								0	0	0	0.30125	1	3166	3166		20.482	0	1				48216	512	32445	32458	54442	54442					0.11714664647661266
RKFIKAPP	8	Unmodified	_RKFIKAPP_					0	0	0		chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3;nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3;ENST00000509177.1_1_8:15480615-15508356:+|nuORF	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8038635253906	2	478.805637	955.596721	-2.2898	-0.0010963	2.2588	0.0010815	-0.030934	-1.4811E-05	478.80658371263473	41.743	1.2165	41.746	40.986	42.202	0.0034142					57	30	2	0	0	0	0.86288	1	3049	3049		26.796	2.5934	1	281640			48217	512	32445	32458	54443	54443					0.11714664647661266
RKFIKAPP	8	Unmodified	_RKFIKAPP_					0	0	0		chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3;nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3;ENST00000509177.1_1_8:15480615-15508356:+|nuORF	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8017578125	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.415	1	38.431	37.931	38.931	0.016563								0	0	0	0.30125	1	2273	2273		20.482	1.1219	1				48218	512	32445	32458	54444	54444					0.11714664647661266
RKFIKAPP	8	Unmodified	_RKFIKAPP_					0	0	0		chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3;nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3;ENST00000509177.1_1_8:15480615-15508356:+|nuORF	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.8048400878906	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.629	1	42.695	42.195	43.195	0.065037								0	0	0	0.30125	1	2882	2882		20.482	1.1219	1				48219	512	32445	32458	54445	54445					0.11714664647661266
RKFIKAPP	8	Unmodified	_RKFIKAPP_					0	0	0		chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3;nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3;ENST00000509177.1_1_8:15480615-15508356:+|nuORF	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.80322265625	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.276	1	44.218	43.718	44.718	-0.058262								0	0	0	0.30252	1	3108	3108		19.36	0	1				48220	512	32445	32458	54446	54446					0.11714664647661266
RKFKKKMKL	9	Unmodified	_RKFKKKMKL_					0	0	0			REV__ENST00000264065.11_1_2:183641855-183641906:+|nuORF	REV__ENST00000264065.11_1_2:183641855-183641906:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.92431640625	2	603.897003	1205.77945	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.534	1	67.085	66.585	67.585	0.55071								0	0	0	0.33676	1	7286	7286		18.324	0	1		+		48221	24463	32446	32459	54447	54447					0.1847947571795885
RKFLFIKK	8	Unmodified	_RKFLFIKK_					0	0	0			REV__nc|ENSG00000156313|Q92834-2|RPGR	REV__nc|ENSG00000156313|Q92834-2|RPGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.359619140625	2	540.358037	1078.70152	0.26404	0.00014267	1.0051	0.00054312	1.2691	0.00068579	540.3583702946399	36.686	1.1714	36.789	36.281	37.453	0.10306					78	34	3	0	0	0	0.86906	1	2011	2011		8.2313	0	1	384450	+		48222	29949	32447	32460	54448	54448					0.16531786124232895
RKFLSMVLSL	10	Unmodified	_RKFLSMVLSL_					0	0	0			REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8565063476562	2	597.357376	1192.7002	0.9357	0.00055895	-3.5954	-0.0021477	-2.6597	-0.0015888	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.67571	3	9592	9463;9592;9749		45.972	5.1941	1	19058000	+		48223	16949	32448	32461	54449;54450;54451	54450					0.11155783973185862
RKFLSMVLSL	10	Unmodified	_RKFLSMVLSL_					0	0	0			REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8560791015625	2	597.357376	1192.7002	0.84117	0.00050248	-3.5267	-0.0021067	-2.6855	-0.0016042	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.54701	3	9514	9514;9560;9753		52.937	10.072	1	18777000	+		48224	16949	32448	32461	54452;54453;54454	54452					0.11155783973185862
RKFLSMVLSL	10	Unmodified	_RKFLSMVLSL_					0	0	0			REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3593139648438	2	597.357376	1192.7002	-0.84393	-0.00050413	-1.4489	-0.0008655	-2.2928	-0.0013696	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.23822	1	11077	11077		79.713	37.316	1	1407500	+		48225	16949	32448	32461	54455	54455					0.11155783973185862
RKFMQDVL	8	Oxidation (M)	_RKFM(Oxidation (M))QDVL_		RKFM(1)QDVL		RKFM(77)QDVL	0	0	1		nc|ENSG00000123136|O00148-3|DDX39A	nc|ENSG00000123136|O00148-3|DDX39A	nc|ENSG00000123136|O00148-3|DDX39A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.7799072265625	2	526.781502	1051.54845	-0.45265	-0.00023845	-2.5611	-0.0013492	-3.0138	-0.0015876	526.779998742406	62.534	1.519	62.562	62.243	63.762	0.028133					119	70	3	0	0	0	0.47906	1	5849	5849		76.847	10.417	1	655170			48226	14881	32449	32462	54456	54456		214			0.02473802945451098
RKFNARRKLKG	11	Unmodified	_RKFNARRKLKG_					0	0	0		nc|ENSG00000147044|O14936-3|CASK;nc|ENSG00000147044|O14936-4|CASK;nc|ENSG00000147044|O14936-6|CASK;nc|ENSG00000147044|O14936-2|CASK;ENSG00000147044|ENST00000378163|CASK;ENST00000492020.5_1_10:75597207-75607060:-|nuORF;nc|ENSG00000148660|Q13555-5|CAMK2G;nc|ENSG00000148660|Q13555-7|CAMK2G;ENST00000472912.5_1_10:75578585-75620616:-|nuORF;ENSG00000148660|ENST00000423381|CAMK2G;nc|ENSG00000148660|Q13555-6|CAMK2G;nc|ENSG00000148660|Q13555|CAMK2G;nc|ENSG00000148660|Q13555-10|CAMK2G;nc|ENSG00000148660|Q13555-8|CAMK2G;nc|ENSG00000148660|Q13555-2|CAMK2G;nc|ENSG00000148660|Q13555-9|CAMK2G;nc|ENSG00000148660|Q13555-3|CAMK2G;nc|ENSG00000148660|Q13555-11|CAMK2G;nc|ENSG00000148660|Q13555-4|CAMK2G	nc|ENSG00000147044|O14936-3|CASK;nc|ENSG00000148660|Q13555-5|CAMK2G	nc|ENSG00000148660|Q13555-5|CAMK2G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.623779296875	3	458.624866	1372.85277	-1.1089	-0.00050858	-1.3569	-0.00062232	-2.4659	-0.0011309	458.62415132719974	106.78	1.1825	106.93	106.56	107.74	0.14843					87	28	5	0	0	0	0.7896	1	11445	11445		13.508	2.5097	1	2607000			48227	4975;4875	32450	32463	54457	54457					0.1812574048476563
RKFPDVKFI	9	Unmodified	_RKFPDVKFI_					0	0	0		ENST00000398028.3_1_6:151148820-151149375:+|nuORF;ENSG00000115539|ENST00000264254|PDCL3;ENST00000429744.2_1_1:52645740-52646091:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.3453369140625	2	575.342584	1148.67061	0.97572	0.00056137	4.3533	0.0025046	5.329	0.003066	575.3449806461122	98.555	2.3295	98.603	98.055	100.38	0.048157					165	53	5	0	0	0	0.78983	1	10486	10486		27.882	1.1893	1	4316200			48228	2853	32451	32464	54458	54458					0.10222588019314571
RKFTKLSF	8	Unmodified	_RKFTKLSF_					0	0	0			REV__nc|ENSG00000132561|O00339-3|MATN2	REV__nc|ENSG00000132561|O00339-3|MATN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087158203125	2	513.808377	1025.6022	-1.4174	-0.00072826	2.551	0.0013107	1.1336	0.00058246	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.89962	1	4045	4045		38.806	8.3025	1	1977600	+		48229	19013	32452	32465	54459	54459					0.0904234343945518
RKFVSMLTII	10	Unmodified	_RKFVSMLTII_					0	0	0			REV__ENST00000296490.7_1_3:52291276-52291372:-|nuORF	REV__ENST00000296490.7_1_3:52291276-52291372:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3667602539062	2	604.365201	1206.71585	1.0484	0.00063359	1.0707	0.00064708	2.119	0.0012807	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.8651	1	11409	11409		25.574	9.9322	1	105850000	+		48230	24712	32453	32466	54460	54460					0.12076070490206803
RKFYGPVK	8	Unmodified	_RKFYGPVK_					0	0	0		nc|ENSG00000101856|O00264-2|PGRMC1	nc|ENSG00000101856|O00264-2|PGRMC1	nc|ENSG00000101856|O00264-2|PGRMC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.7952880859375	2	497.795269	993.575986	0.10323	5.1388E-05	0.97414	0.00048492	1.0774	0.00053631	497.7955420598114	48.958	1.1928	48.952	48.605	49.798	-0.0056381					56	26	3	0	0	0	0.84341	1	4093	4093		24.203	3.7209	1	455850			48231	14822	32454	32467	54461	54461					0.0789407426799471
RKGFLFKS	8	Unmodified	_RKGFLFKS_					0	0	0		nc|ENSG00000196235|O00267-2|SUPT5H;ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF	nc|ENSG00000196235|O00267-2|SUPT5H	nc|ENSG00000196235|O00267-2|SUPT5H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7953186035156	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.82419	1	4431	4431		13.775	0	1	748320			48232	8031	32455	32468	54462	54462					0.08446074267999393
RKGFLFKS	8	Unmodified	_RKGFLFKS_					0	0	0		nc|ENSG00000196235|O00267-2|SUPT5H;ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF	nc|ENSG00000196235|O00267-2|SUPT5H	nc|ENSG00000196235|O00267-2|SUPT5H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79638671875	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.85277	1	3631	3631		25.45	0	1	1502200			48233	8031	32455	32468	54463	54463					0.08446074267999393
RKGGCPLL	8	Unmodified	_RKGGCPLL_					0	0	0			REV__ENST00000537971.5_1_12:3392287-3392575:+|nuORF	REV__ENST00000537971.5_1_12:3392287-3392575:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.8908386230469	2	422.247098	842.479642	0.21095	8.9071E-05	2.9843	0.0012601	3.1953	0.0013492	422.24705191044205	29.361	0.056814	29.373	29.328	29.384	0.01123					4	2	2	0	0	0	0.4196	1	1239	1239		9.4706	9.4706	1	11870	+		48234	28427	32456	32469	54464	54464					0.05210183436383886
RKGGRSLV	8	Unmodified	_RKGGRSLV_					0	0	0			REV__ENSG00000197471|ENST00000652691|SPN	REV__ENSG00000197471|ENST00000652691|SPN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.77337646484375	2	436.774868	871.535184	0.36031	0.00015737	-2.8343	-0.001238	-2.474	-0.0010806	436.77349327524536	26.738	0.89724	26.766	26.451	27.349	0.028172					66	41	2	0	0	0	0.80706	1	1040	1040		19.36	1.0356	1	200440	+		48235	23235	32457	32470	54465	54465					0.09427732948370249
RKGHAVGD	8	Unmodified	_RKGHAVGD_					0	0	0		ENST00000429775.2_1_X:70182861-70183140:+|nuORF;ENSG00000186468|ENST00000296674|RPS23	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2276611328125	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.92457	1	7234	7234		47.916	5.4411	1	419890			48236	7797	32458	32471	54466	54466					0.015265941262327942
RKGHLPAP	8	Unmodified	_RKGHLPAP_					0	0	0		ENSG00000164080|ENST00000684192|RAD54L2;ENST00000461680.1_1_3:51673299-51697433:+|nuORF;ENST00000487093.5_1_3:51669772-51697433:+|nuORF	ENSG00000164080|ENST00000684192|RAD54L2	ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2630615234375	2	438.264136	874.51372	-1.8646	-0.00081717	-0.44896	-0.00019677	-2.3135	-0.0010139	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.83466	1	2934	2934		23.037	1.3344	1	3384400			48237	5913	32459	32472	54467	54467					0.07144347919643224
RKGHLPAP	8	Unmodified	_RKGHLPAP_					0	0	0		ENSG00000164080|ENST00000684192|RAD54L2;ENST00000461680.1_1_3:51673299-51697433:+|nuORF;ENST00000487093.5_1_3:51669772-51697433:+|nuORF	ENSG00000164080|ENST00000684192|RAD54L2	ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2636413574219	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.86791	1	2381	2381		28.254	2.8041	1	3673500			48238	5913	32459	32472	54468	54468					0.07144347919643224
RKGHLPAP	8	Unmodified	_RKGHLPAP_					0	0	0		ENSG00000164080|ENST00000684192|RAD54L2;ENST00000461680.1_1_3:51673299-51697433:+|nuORF;ENST00000487093.5_1_3:51669772-51697433:+|nuORF	ENSG00000164080|ENST00000684192|RAD54L2	ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633972167969	2	438.264136	874.51372	0.33791	0.0001481	-2.3812	-0.0010436	-2.0433	-0.00089552	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.86288	1	3665	3665		26.796	4.8362	1	4268300			48239	5913	32459	32472	54469	54469					0.07144347919643224
RKGHLPAP	8	Unmodified	_RKGHLPAP_					0	0	0		ENSG00000164080|ENST00000684192|RAD54L2;ENST00000461680.1_1_3:51673299-51697433:+|nuORF;ENST00000487093.5_1_3:51669772-51697433:+|nuORF	ENSG00000164080|ENST00000684192|RAD54L2	ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26300048828125	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.86791	1	2839	2839		28.254	6.5519	1	22029000			48240	5913	32459	32472	54470	54470					0.07144347919643224
RKGIKQEAF	9	Unmodified	_RKGIKQEAF_					0	0	0		chr12:90970139-90971800|56|1321.25|0.18|12.81|-|0|EPYC,EPYC|1;chr12:91002573-91004947|39|60.26|0.0|15.62|-|ENST00000551767|EPYC,EPYC;ENSG00000083782|ENST00000261172|EPYC	chr12:90970139-90971800|56|1321.25|0.18|12.81|-|0|EPYC,EPYC|1	chr12:90970139-90971800|56|1321.25|0.18|12.81|-|0|EPYC,EPYC|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.7255859375	2	538.81419	1075.61383	-1.1684	-0.00062952	-2.9848	-0.0016082	-4.1531	-0.0022378	538.8125985367433	71.859	0.74835	72.244	71.875	72.624	0.38449					34	17	3	0	0	0	0.20789	1	7976	7976		42.396	7.1954	1	178790			48241	146	32460	32473	54471	54471					0.07904540462777732
RKGIKVEGVPL	11	Unmodified	_RKGIKVEGVPL_					0	0	0			REV__nc|ENSG00000106410|O60393-2|NOBOX	REV__nc|ENSG00000106410|O60393-2|NOBOX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.8831787109375	2	598.379697	1194.74484	-0.74115	-0.00044349	3.5243	0.0021089	2.7832	0.0016654	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.732	1	3041	3041		26.063	4.1035	1	772980	+		48242	17611	32461	32474	54472	54472					0.15525931110846614
RKGKEQAVP	9	Unmodified	_RKGKEQAVP_					0	0	0		chr8:42194213-42207494|20|15.6|0.23|6.1|-|0|TE_info:AluJb,AluJb_dup55022,Alu,SINE,acceptor,-,42194041,42194213|None,PLAT|1	chr8:42194213-42207494|20|15.6|0.23|6.1|-|0|TE_info:AluJb,AluJb_dup55022,Alu,SINE,acceptor,-,42194041,42194213|None,PLAT|1	chr8:42194213-42207494|20|15.6|0.23|6.1|-|0|TE_info:AluJb,AluJb_dup55022,Alu,SINE,acceptor,-,42194041,42194213|None,PLAT|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8006286621094	2	506.79854	1011.58253	0.2762	0.00013998	4.2956	0.002177	4.5718	0.002317	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.78536	1	3304	3304		29.15	1.2673	1	416790			48243	519	32462	32475	54473	54473					0.07719967428704422
RKGLKKMCV	9	Unmodified	_RKGLKKMCV_					0	0	0			REV__ENST00000540925.5_1_11:113745412-113745487:-|nuORF	REV__ENST00000540925.5_1_11:113745412-113745487:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.81689453125	2	531.817364	1061.62018	-0.04786	-2.5453E-05	-1.0342	-0.00054998	-1.082	-0.00057543	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.7932	1	8734	8734		25.45	4.5032	1	4916300	+		48244	28474	32463	32476	54474	54474					0.09183019098304612
RKGMAKGK	8	Unmodified	_RKGMAKGK_					0	0	0		ENSG00000142347|ENST00000644032|MYO1F;ENST00000596245.1_1_19:8590207-8591472:-|nuORF	ENSG00000142347|ENST00000644032|MYO1F	ENSG00000142347|ENST00000644032|MYO1F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.76318359375	2	438.265822	874.517091	-1.5666	-0.00068658	-3.8946	-0.0017069	-5.4611	-0.0023934	438.2640033133023	45.783	1.2838	45.798	45.032	46.315	0.015511					49	34	2	0	0	0	0.80706	1	3310	3310		19.36	2.655	1	101570			48245	4560	32464	32477	54475	54475					0.07481274702013252
RKGPAGGRRRP	11	Unmodified	_RKGPAGGRRRP_					0	0	0			REV__ENST00000485972.5_1_7:150755117-150755342:-|nuORF	REV__ENST00000485972.5_1_7:150755117-150755342:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.367919921875	2	604.365779	1206.717	2.5019	0.001512	-1.3517	-0.00081694	1.1501	0.0006951	604.3649596280135	107.39	0.6578	107.49	107.05	107.71	0.10396					39	24	2	0	0	0	0.69995	1	13102	13102		31.53	3.6476	1	96280	+		48246	27535	32465	32478	54476	54476					0.12191465693990722
RKGPHPAI	8	Unmodified	_RKGPHPAI_					0	0	0			REV__ENSG00000198894|ENST00000361786|CIPC	REV__ENSG00000198894|ENST00000361786|CIPC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2627258300781	2	438.264136	874.51372	-1.5833	-0.00069392	-0.15448	-6.7702E-05	-1.7378	-0.00076162	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.83466	1	2171	2171		23.037	2.5549	1	11160000	+		48247	23406	32466	32479	54477	54477					0.07144347919643224
RKGPHPAI	8	Unmodified	_RKGPHPAI_					0	0	0			REV__ENSG00000198894|ENST00000361786|CIPC	REV__ENSG00000198894|ENST00000361786|CIPC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2646179199219	2	438.264136	874.51372	0.19585	8.5835E-05	-3.131	-0.0013722	-2.9352	-0.0012864	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.82464	1	2849	2849		21.702	3.3779	1	22029000	+		48248	23406	32466	32479	54478	54478					0.07144347919643224
RKGPLVKQTKV	11	Unmodified	_RKGPLVKQTKV_					0	0	0		nc|ENSG00000161681|Q9Y566-2|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1;ENSG00000161681|ENST00000293441|SHANK1	nc|ENSG00000161681|Q9Y566-2|SHANK1	nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.606689453125	3	418.60659	1252.79794	-1.7442	-0.00073012	-2.6386	-0.0011045	-4.3828	-0.0018347	418.60537062211796	49.043	4.3192	49.043	47.911	52.23	0					175	108	3	0	0	0	0.77205	1	4082	4082		17.167	1.2461	1	101990			48249	5650	32467	32480	54479	54479					0.18165308893503607
RKGSLFLGL	9	Unmodified	_RKGSLFLGL_					0	0	0			REV__ENST00000418390.6_1_1:24088355-24088499:+|nuORF	REV__ENST00000418390.6_1_1:24088355-24088499:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.80621337890625	2	495.808377	989.6022	-0.57039	-0.0002828	-3.7409	-0.0018548	-4.3113	-0.0021376	495.8065300685273	90.913	2.2012	90.959	90.595	92.796	0.046448					94	52	3	0	0	0	0.69914	1	9488	9488		40.573	3.4135	1	659920	+		48250	26462	32468	32481	54480	54480					0.1069834343944649
RKGVAVRARPW	11	Unmodified	_RKGVAVRARPW_					0	0	0		ENSG00000177108|ENST00000319374|ZDHHC22	ENSG00000177108|ENST00000319374|ZDHHC22	ENSG00000177108|ENST00000319374|ZDHHC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3931274414062	2	648.394005	1294.77346	-1.1411	-0.00073988	-1.4026	-0.00090944	-2.5437	-0.0016493	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75921	2	12965	12596;12965		19.997	1.7347	1	2297700			48251	7118	32469	32482	54481;54482	54482					0.13786093530643484
RKGVNARTAM	10	Unmodified	_RKGVNARTAM_					0	0	0			REV__ENSG00000116991|ENST00000674635|SIPA1L2	REV__ENSG00000116991|ENST00000674635|SIPA1L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3060913085938	2	552.308749	1102.60295	-1.4446	-0.00079788	-2.6511	-0.0014642	-4.0957	-0.0022621	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.80179	1	9433	9433		39.253	1.4413	1	1677300	+		48252	18239	32470	32483	54483	54483					0.05574814816873186
RKGWGLGVP	9	Unmodified	_RKGWGLGVP_					0	0	0			REV__ENST00000532163.5_1_11:111945420-111945471:+|nuORF	REV__ENST00000532163.5_1_11:111945420-111945471:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	485.2843322753906	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.708	1	59.708	59.208	60.208	0								0	0	0	0.31472	1	5205	5205		25.45	1.2474	1		+		48253	28318	32471	32484	54484	54484					0.07004903608185487
RKHATLTS	8	Unmodified	_RKHATLTS_					0	0	0			REV__ENSG00000213988|ENST00000418063|ZNF90	REV__ENSG00000213988|ENST00000418063|ZNF90	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2603454589844	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.91977	1	7385	7385		45.952	13.997	1	1032000	+		48254	23640	32472	32485	54485	54485					0.054357228488470355
RKHDKVTDK	9	Unmodified	_RKHDKVTDK_					0	0	0		ENSG00000183783|ENST00000360029|KCTD8	ENSG00000183783|ENST00000360029|KCTD8	ENSG00000183783|ENST00000360029|KCTD8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	564.321044921875	2	563.820004	1125.62546	-1.2457	-0.00070233	-1.7556	-0.00098984	-3.0013	-0.0016922	563.8178367580804	55.254	0.89718	55.246	54.942	55.839	-0.0077095					38	23	2	0	0	0	0.77244	1	4990	4990		32.812	4.9302	1	71105			48255	7562	32473	32486	54486	54486					0.0676673748612302
RKHDKVTDK	9	Unmodified	_RKHDKVTDK_					0	0	0		ENSG00000183783|ENST00000360029|KCTD8	ENSG00000183783|ENST00000360029|KCTD8	ENSG00000183783|ENST00000360029|KCTD8	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	563.820004	1125.62546	0.21006	0.00011843	-2.4079	-0.0013576	-2.1979	-0.0012392	563.8166226411039	55.491	0.83716	55.522	55.076	55.913	0.030838	0.20639	0.0015887	NaN	32.812	37	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94130			48256	7562	32473	32486							0.0676673748612302
RKHETLQSK	9	Unmodified	_RKHETLQSK_					0	0	0			REV__ENSG00000198093|ENST00000354957|ZNF649	REV__ENSG00000198093|ENST00000354957|ZNF649	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	563.8177490234375	2	563.820004	1125.62546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.181	1	57.181	56.681	57.681	0								0	0	0	0.31437	1	4906	4906		25.574	0	1		+		48257	23299	32474	32487	54487	54487					0.0676673748612302
RKHKGKRC	8	Unmodified	_RKHKGKRC_					0	0	0			REV__nc|ENSG00000049246|P56645|PER3	REV__nc|ENSG00000049246|P56645|PER3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.79962158203125	2	506.800894	1011.58724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.233	1	43.239	42.739	43.739	0.0057487								0	0	0	0.29344	1	2965	2965		31.955	8.9124	1		+		48258	16370	32475	32488	54488	54488					0.08190573090485032
RKHKGKRC	8	Unmodified	_RKHKGKRC_					0	0	0			REV__nc|ENSG00000049246|P56645|PER3	REV__nc|ENSG00000049246|P56645|PER3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.80010986328125	2	506.800894	1011.58724	-0.34654	-0.00017563	0.81649	0.0004138	0.46995	0.00023817	506.8012475613855	52.837	1.9821	52.763	52.142	54.124	-0.074509					82	54	2	0	0	0	0.80706	1	4335	4335		19.36	1.0356	1	214150	+		48259	16370	32475	32488	54489	54489					0.08190573090485032
RKHKRRRRKQ	10	Unmodified	_RKHKRRRRKQ_					0	0	0		nc|ENSG00000107404|O14640-2|DVL1;ENSG00000107404|ENST00000378888|DVL1	nc|ENSG00000107404|O14640-2|DVL1	nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.9803466796875	3	483.646776	1447.9185	-0.37847	-0.00018305	-1.3274	-0.00064197	-1.7058	-0.00082502	483.6460621723924	44.406	1.6273	44.856	44.239	45.867	0.45025					169	39	6	0	0	0	0.89119	1	4165	4165		10.587	0.4829	1	32621000			48260	2344	32476	32489	54490	54490					0.21245574450313143
RKHLKGVL	8	Unmodified	_RKHLKGVL_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	475.6930236816406	2	475.816536	949.618519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.043	1	24	23.5	24.5	-0.043221								0	0	0	0.29353	1	842	842		28.254	0	1				48261	1328	32477	32490	54491	54491					0.14169469396222212
RKHQEALH	8	Unmodified	_RKHQEALH_					0	0	0		ENSG00000171219|ENST00000342711|CDC42BPG	ENSG00000171219|ENST00000342711|CDC42BPG	ENSG00000171219|ENST00000342711|CDC42BPG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.7851257324219	2	509.780682	1017.54681	5.0414	0.00257	3.9643	0.0020209	9.0057	0.0045909	509.78224354563946	106.8	0.60811	106.95	106.64	107.25	0.14929					48	21	3	0	0	0	0.92973	1	13042	13042		50.025	5.4935	1	378320			48262	6647	32478	32491	54492	54492					0.03873929971700818
RKHQNKLH	8	Unmodified	_RKHQNKLH_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8101806640625	2	530.809774	1059.60499	1.9903	0.0010565	-0.95296	-0.00050584	1.0374	0.00055065	530.8091393249302	98.15	1.1454	98.536	98.015	99.161	0.38548					61	23	4	0	0	0	0.91005	1	11790	11790		42.474	1.6963	1	1598900	+		48263	23285	32479	32492	54493	54493					0.0775761161698938
RKHQNKLH	8	Unmodified	_RKHQNKLH_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8107299804688	2	530.809774	1059.60499	2.1944	0.0011648	0.13816	7.3339E-05	2.3326	0.0012381	530.8089951106499	102.41	1.0747	102.67	101.8	102.88	0.26323					40	26	3	0	0	0	0.60155	1	12435	12435		71.378	13.567	1	654720	+		48264	23285	32479	32492	54494	54494					0.0775761161698938
RKHQNKLH	8	Unmodified	_RKHQNKLH_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8109130859375	2	530.809774	1059.60499	2.8792	0.0015283	-0.1786	-9.4803E-05	2.7006	0.0014335	530.8086334321874	102.4	1.0794	102.69	101.95	103.03	0.29865					60	25	4	0	0	0	0.88915	1	12473	12473		35.201	0	1	672210	+		48265	23285	32479	32492	54495	54495					0.0775761161698938
RKHQNKLH	8	Unmodified	_RKHQNKLH_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8119506835938	2	530.809774	1059.60499	3.1482	0.0016711	-2.0866	-0.0011076	1.0616	0.0005635	530.8085142109409	103.14	0.35374	103.4	103.23	103.58	0.26524					14	8	2	0	0	0	0.93529	1	12578	12578		52.299	11.727	1	853120	+		48266	23285	32479	32492	54496	54496					0.0775761161698938
RKHQNKLH	8	Unmodified	_RKHQNKLH_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	530.809774	1059.60499	-0.04244	-2.2528E-05	1.5855	0.00084162	1.5431	0.00081909	530.8102329459673	102.65	0.37218	102.84	102.52	102.89	0.19484	0.070041	0.00033986	NaN	71.378	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87163	+		48267	23285	32479	32492							0.0775761161698938
RKHQNKLH	8	Unmodified	_RKHQNKLH_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	530.809774	1059.60499	0.83261	0.00044196	1.423	0.00075534	2.2556	0.0011973	530.8099560643269	102.76	0.4132	102.88	102.52	102.93	0.12622	0.10899	0.0001673	NaN	71.378	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53691	+		48268	23285	32479	32492							0.0775761161698938
RKHQNKLH	8	Unmodified	_RKHQNKLH_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	530.809774	1059.60499	-1.5147	-0.000804	3.7693	0.0020008	2.2547	0.0011968	530.8111199078058	102.64	0.33074	102.78	102.57	102.9	0.13569	0.0022011	0.0026582	NaN	71.378	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49416	+		48269	23285	32479	32492							0.0775761161698938
RKHTTLAS	8	Unmodified	_RKHTTLAS_					0	0	0			REV__ENSG00000197372|ENST00000359788|ZNF675;REV__ENSG00000213967|ENST00000594466|ZNF726	REV__ENSG00000213967|ENST00000594466|ZNF726	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2632141113281	2	457.264333	912.514114	-1.2803	-0.00058543	1.4305	0.00065413	0.15023	6.8693E-05	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.89962	1	7304	7304		38.806	3.1879	1	812040	+		48270	23223;23639	32480	32493	54497	54497					0.05435722848858404
RKHTTLHVSV	10	Unmodified	_RKHTTLHVSV_					0	0	0			REV__ENST00000600766.1_3_19:23032061-23041232:+|nuORF	REV__ENST00000600766.1_3_19:23032061-23041232:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3447875976562	2	589.343646	1176.67274	1.3218	0.00077898	-2.1122	-0.0012448	-0.79038	-0.00046581	589.3422903600197	104.56	1.3297	104.75	103.97	105.3	0.18887					70	33	4	0	0	0	0.8651	1	12764	12764		25.574	2.5316	1	471390	+		48271	23972	32481	32494	54498	54498					0.09147016757128767
RKHTTLTT	8	Unmodified	_RKHTTLTT_					0	0	0			REV__nc|ENSG00000250312|Q3SXZ3-2|ZNF718	REV__nc|ENSG00000250312|Q3SXZ3-2|ZNF718	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27789306640625	2	479.277441	956.540328	-0.098426	-4.7173E-05	-0.05206	-2.4951E-05	-0.15049	-7.2124E-05	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.87922	1	8013	8013		31.955	7.7521	1	1929800	+		48272	23870	32482	32495	54499	54499					0.06031992020314192
RKHTTLTT	8	Unmodified	_RKHTTLTT_					0	0	0			REV__nc|ENSG00000250312|Q3SXZ3-2|ZNF718	REV__nc|ENSG00000250312|Q3SXZ3-2|ZNF718	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27728271484375	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.85277	1	7996	7996		25.45	1.2474	1	1785900	+		48273	23870	32482	32495	54500	54500					0.06031992020314192
RKHTTLTT	8	Unmodified	_RKHTTLTT_					0	0	0			REV__nc|ENSG00000250312|Q3SXZ3-2|ZNF718	REV__nc|ENSG00000250312|Q3SXZ3-2|ZNF718	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27783203125	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.884	1	8549	8549		33.516	3.0119	1	6441000	+		48274	23870	32482	32495	54501	54501					0.06031992020314192
RKIAELLEGKP	11	Unmodified	_RKIAELLEGKP_					0	0	0			REV__ENST00000541573.5_1_6:160103527-160113001:-|nuORF	REV__ENST00000541573.5_1_6:160103527-160113001:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	627.3832397460938	2	627.382437	1252.75032	2.3057	0.0014466	-2.6415	-0.0016572	-0.33579	-0.00021067	627.3803631374124	110.82	0.68079	110.87	110.56	111.24	0.054062					56	23	3	0	0	0	0.61369	1	13414	13414		42.864	1.4377	1	353100	+		48275	28389	32483	32496	54502	54502					0.1340560990265658
RKIAELLEGKP	11	Unmodified	_RKIAELLEGKP_					0	0	0			REV__ENST00000541573.5_1_6:160103527-160113001:-|nuORF	REV__ENST00000541573.5_1_6:160103527-160113001:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	627.382437	1252.75032	1.386	0.00086953	-2.3879	-0.0014981	-1.0019	-0.00062859	627.3808879599815	110.64	0.12528	110.76	110.64	110.77	0.11659	-0.065626	-2.0548E-05	NaN	42.864	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95173	+		48276	28389	32483	32496							0.1340560990265658
RKIAELLEGKP	11	Unmodified	_RKIAELLEGKP_					0	0	0			REV__ENST00000541573.5_1_6:160103527-160113001:-|nuORF	REV__ENST00000541573.5_1_6:160103527-160113001:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	627.382437	1252.75032	0.92688	0.00058151	-0.87823	-0.00055099	0.048648	3.0521E-05	627.3815328610885	110.76	0.41135	110.84	110.57	110.98	0.073685	0.014577	0.0018737	NaN	42.864	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60057	+		48277	28389	32483	32496							0.1340560990265658
RKIEEATH	8	Unmodified	_RKIEEATH_					0	0	0			REV__ENSG00000112685|ENST00000230449|EXOC2	REV__ENSG00000112685|ENST00000230449|EXOC2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2989196777344	2	492.267073	982.519593	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.298	1	60.399	59.899	60.899	0.10082								0	0	0	0.29631	1	5209	5209		25.45	1.2474	1		+		48278	17959	32484	32497	54503	54503					0.027634016406636874
RKIFILQRY	9	Unmodified	_RKIFILQRY_					0	0	0			REV__chr2:203328631-203380208|45|10.91|0.37|4.87|+|1|ABI2,ABI2|1	REV__chr2:203328631-203380208|45|10.91|0.37|4.87|+|1|ABI2,ABI2|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76312255859375	3	412.92403	1235.75026	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.142	1	66.107	65.607	66.607	-0.035217								0	0	0	0.33394	1	6325	6325		19.104	0.57247	1		+		48279	15750	32485	32498	54504	54504					0.1418165469331143
RKIFRLIKK	9	Unmodified	_RKIFRLIKK_					0	0	0		ENST00000392859.7_1_11:118471445-118471652:+|nuORF	ENST00000392859.7_1_11:118471445-118471652:+|nuORF	ENST00000392859.7_1_11:118471445-118471652:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	601.4179077148438	2	601.416417	1200.81828	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.358	1	29.358	28.858	29.858	0								0	0	0	0.36138	1	1268	1268		3.6843	0	1				48280	11033	32486	32499	54505	54505					0.22590524343968355
RKIGYFVI	8	Unmodified	_RKIGYFVI_					0	0	0		ENSG00000011677|ENST00000370314|GABRA3;ENSG00000151834|ENST00000381620|GABRA2;nc|ENSG00000151834|P47869-2|GABRA2;ENSG00000022355|ENST00000393943|GABRA1;chr5:161848612-161850796|17|26.76|0.53|5.66|+|ENST00000437025|GABRA1,GABRA1;ENSG00000186297|ENST00000335625|GABRA5;chr15:26867111-26869175|22|17.95|0.15|6.94|+|ENST00000355395|GABRA5,GABRA5	ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.3056335449219	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.779	1	52.776	52.276	53.276	-0.0033035								0	0	0	0.30125	1	4582	4582		20.482	0	1				48281	796	32487	32500	54506	54506					0.0988724492780193
RKIHGSAT	8	Unmodified	_RKIHGSAT_					0	0	0			REV__ENSG00000176887|ENST00000322002|SOX11	REV__ENSG00000176887|ENST00000322002|SOX11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2519226074219	2	435.251226	868.487899	1.6601	0.00072257	-1.6819	-0.00073205	-0.021767	-9.474E-06	435.25040422889157	93.013	2.1505	92.951	91.863	94.014	-0.06144					107	50	3	0	0	0	0.87479	1	9842	9842		30.504	2.2494	1	812220	+		48282	22150	32488	32501	54507	54507					0.048394536773685104
RKIINPCVKRP	11	Unmodified	_RKIINPCVKRP_					0	0	0			REV__ENSG00000159527|ENST00000683862|PGLYRP3	REV__ENSG00000159527|ENST00000683862|PGLYRP3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.9397888183594	3	441.939575	1322.79689	-1.6349	-0.00072252	2.0849	0.00092142	0.45005	0.0001989	442.27488917327764	56.546	2.0203	56.546	56.188	58.209	0					207	89	3	0	0	0	0.75121	2	4899	4890;4899		21.78	3.4488	1	695230	+		48283	20665	32489	32502	54508;54509	54509					0.1484077125294334
RKIINPCVKRP	11	Unmodified	_RKIINPCVKRP_					0	0	0			REV__ENSG00000159527|ENST00000683862|PGLYRP3	REV__ENSG00000159527|ENST00000683862|PGLYRP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.27508544921875	3	441.939575	1322.79689	-0.69974	-0.00030924	1.2232	0.00054059	0.52348	0.00023135	441.9399909148648	56.856	0.75961	56.83	56.632	57.391	-0.026108					86	36	3	0	0	0	0.72374	2	4799	4793;4799		27.644	1.7522	1	338630	+		48284	20665	32489	32502	54510;54511	54511					0.1484077125294334
RKIKEITDS	9	Unmodified	_RKIKEITDS_					0	0	0			REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.3203125	2	545.316763	1088.61897	0.73643	0.00040159	-0.91435	-0.00049861	-0.17792	-9.7022E-05	545.316117867523	88.493	3.0395	88.643	86.614	89.654	0.15055					258	71	4	0	0	0	0.7932	1	8608	8608		21.96	0	1	5181100	+		48285	16960	32490	32503	54512	54512					0.07820799534761136
RKIKKHSHVRK	11	Unmodified	_RKIKKHSHVRK_					0	0	0			REV__ENST00000480924.3_1_12:87563815-87564172:-|nuORF	REV__ENST00000480924.3_1_12:87563815-87564172:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.3052062988281	3	472.972266	1415.89497	-1.6394	-0.00077538	-1.0525	-0.00049779	-2.6919	-0.0012732	472.9717127008119	49.434	3.3366	49.434	48.538	51.875	0					243	82	4	0	0	0	0.77511	3	3832	3832;4004;4035		16.53	3.0219	1	1017000	+		48286	27428	32491	32504	54513;54514;54515	54513					0.20365715893126435
RKIKKHSHVRK	11	Unmodified	_RKIKKHSHVRK_					0	0	0			REV__ENST00000480924.3_1_12:87563815-87564172:-|nuORF	REV__ENST00000480924.3_1_12:87563815-87564172:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.9709777832031	3	472.972266	1415.89497	0.3106	0.00014691	-3.0231	-0.0014298	-2.7125	-0.0012829	473.3050663884793	49.019	2.0636	49.057	48.411	50.474	0.037731					160	51	5	0	0	0	0.79476	1	3760	3760		12.433	0.97822	1	2073100	+		48287	27428	32491	32504	54516	54516					0.20365715893126435
RKIKKHSHVRK	11	Unmodified	_RKIKKHSHVRK_					0	0	0			REV__ENST00000480924.3_1_12:87563815-87564172:-|nuORF	REV__ENST00000480924.3_1_12:87563815-87564172:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.969970703125	3	472.972266	1415.89497	-0.61443	-0.00029061	-2.1783	-0.0010303	-2.7927	-0.0013209	472.9711500191985	46.191	1.1241	46.663	46.09	47.214	0.4714					97	27	5	0	0	0	0.79716	1	4324	4324		11.932	2.2862	1	6530400	+		48288	27428	32491	32504	54517	54517					0.20365715893126435
RKIKNKPIV	9	Unmodified	_RKIKNKPIV_					0	0	0		nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B	nc|ENSG00000090889|O95239-2|KIF4A	nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.3740844726562	2	548.371675	1094.7288	1.358	0.0007447	3.3661	0.0018459	4.7241	0.0025906	548.3732426557895	36.03	1.5893	36.47	35.732	37.321	0.44043					101	39	4	0	0	0	0.74721	1	2824	2824		37.159	4.3467	1	1040800			48289	1658	32492	32505	54518	54518					0.18522269664572377
RKIKNKPIVN	10	Unmodified	_RKIKNKPIVN_					0	0	0		nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B	nc|ENSG00000090889|O95239-2|KIF4A	nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.3897094726562	2	605.393139	1208.77173	-1.3112	-0.00079378	-4.2469	-0.002571	-5.558	-0.0033648	605.3904490970708	44.982	0.96035	44.978	44.616	45.577	-0.0041618					50	21	3	0	0	0	0.86763	1	3550	3550		26.693	2.1737	1	285680			48290	1658	32493	32506	54519	54519					0.17569039722025082
RKIKNKPIVN	10	Unmodified	_RKIKNKPIVN_					0	0	0		nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B	nc|ENSG00000090889|O95239-2|KIF4A	nc|ENSG00000090889|O95239-2|KIF4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92938232421875	3	403.931185	1208.77173	-1.067	-0.00043099	-3.6376	-0.0014693	-4.7046	-0.0019003	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.8505	1	4101	4101		18.531	5.5736	1	5907700			48291	1658	32493	32506	54520	54520					0.17569039722025082
RKILEKERM	9	Unmodified	_RKILEKERM_					0	0	0			REV__nc|ENSG00000073803|O43283-5|MAP3K13	REV__nc|ENSG00000073803|O43283-5|MAP3K13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.8577880859375	2	601.855532	1201.69651	1.0107	0.00060827	2.6149	0.0015738	3.6255	0.002182	601.8569689467788	103.23	2.1882	103.41	103.08	105.27	0.18297					123	54	4	0	0	0	0.7932	1	11007	11007		25.574	0	1	2928900	+		48292	16682	32494	32507	54521	54521					0.10373114199296651
RKILKQAKKIN	11	Unmodified	_RKILKQAKKIN_					0	0	0			REV__nc|ENSG00000168116|Q9HCI6-2|KIAA1586	REV__nc|ENSG00000168116|Q9HCI6-2|KIAA1586	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	447.27325439453125	3	447.301389	1338.88234	-0.14517	-6.4934E-05	0.38556	0.00017246	0.2404	0.00010753	447.3023037745381	107.35	0.11996	107.31	107.21	107.33	-0.034409					4	2	2	0	0	0	0.18238	1	11680	11680		9.2118	2.5522	1	31889	+		48293	21462	32495	32508	54522	54522					0.22645259710270693
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9739990234375	3	478.973384	1433.89832	-1.7043	-0.00081634	3.2384	0.0015511	1.5341	0.00073477	478.9749318699197	42.97	1.9218	42.97	41.976	43.898	0					105	47	4	0	0	0	0.83434	1	3046	3046		7.0192	1.3204	1	335660			48294	6740	32496	32509	54523	54523					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9708557128906	3	478.973384	1433.89832	-1.6788	-0.00080411	3.2689	0.0015657	1.5901	0.0007616	479.3090926937771	44.658	1.9564	44.658	43.823	45.779	0					118	47	4	0	0	0	0.76892	1	3380	3380		17.833	5.4003	1	394570			48295	6740	32496	32509	54524	54524					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3089294433594	3	478.973384	1433.89832	-1.6535	-0.00079198	3.9148	0.0018751	2.2613	0.0010831	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.79716	1	3503	3503		11.932	2.7206	1	252010			48296	6740	32496	32509	54525	54525					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3080139160156	3	478.973384	1433.89832	-1.6306	-0.00078103	4.3048	0.0020619	2.6742	0.0012809	478.97540943407233	47.987	1.2617	47.987	47.56	48.821	0					77	38	3	0	0	0	0.81021	1	3757	3757		9.2118	1.1774	1	195490			48297	6740	32496	32509	54526	54526					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3092346191406	3	478.973384	1433.89832	-1.6051	-0.0007688	3.9699	0.0019015	2.3648	0.0011327	478.9751768575692	49.706	2.3794	49.706	48.538	50.918	0					127	57	3	0	0	0	0.78683	2	3963	3963;3979		14.086	2.1536	1	134370			48298	6740	32496	32509	54527;54528	54527					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3081970214844	3	478.973384	1433.89832	-1.5624	-0.00074834	3.9921	0.0019121	2.4297	0.0011638	479.30961963549026	52.606	1.2577	52.606	52.057	53.314	0					69	33	3	0	0	0	0.79476	1	4358	4358		12.433	3.221	1	125180			48299	6740	32496	32509	54529	54529					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3085632324219	3	478.973384	1433.89832	0.22007	0.00010541	1.4347	0.00068717	1.6548	0.00079258	478.9740845349807	44.981	2.0928	44.958	43.729	45.822	-0.023079					123	48	4	0	0	0	0.77205	2	3511	3355;3511		17.167	5.2344	1	463950			48300	6740	32496	32509	54530;54531	54531					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3100280761719	3	478.973384	1433.89832	0.1614	7.7307E-05	2.071	0.00099196	2.2324	0.0010693	478.974258997061	46.621	1.762	46.607	45.625	47.387	-0.013821					99	45	3	0	0	0	0.80164	3	3705	3705;3725;3804		10.998	1.7864	1	179760			48301	6740	32496	32509	54532;54533;54534	54532					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9743347167969	3	478.973384	1433.89832	0.065395	3.1322E-05	2.2352	0.0010706	2.3006	0.0011019	478.9743761165068	49.154	1.8702	49.148	48.387	50.257	-0.0056381					110	43	3	0	0	0	0.7896	4	4118	4025;4085;4097;4118		13.508	4.2961	1	187140			48302	6740	32496	32509	54535;54536;54537;54538	54538					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9755859375	3	478.973384	1433.89832	0.0068331	3.2729E-06	2.4216	0.0011599	2.4284	0.0011632	478.9744559828599	50.975	1.3531	50.973	50.261	51.614	-0.0020447					59	37	2	0	0	0	0.77803	2	4278	4278;4355		15.921	6.7089	1	175970			48303	6740	32496	32509	54539;54540	54539					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.30712890625	3	478.973384	1433.89832	-0.022494	-1.0774E-05	2.5633	0.0012277	2.5408	0.001217	478.9744999510038	52.877	2.746	52.874	51.525	54.271	-0.0033035					162	72	3	0	0	0	0.69687	6	4579	4450;4462;4558;4564;4567;4579		32.034	20.58	1	150480			48304	6740	32496	32509	54541;54542;54543;54544;54545;54546	54546					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97381591796875	3	478.973384	1433.89832	-1.0377	-0.00049701	2.1803	0.0010443	1.1426	0.00054727	478.97440370036395	43.258	1.9554	43.222	42.189	44.144	-0.035816					117	46	4	0	0	0	0.77803	1	3404	3404		15.921	3.4878	1	472330			48305	6740	32496	32509	54547	54547					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9743347167969	3	478.973384	1433.89832	-0.79395	-0.00038028	3.0915	0.0014807	2.2975	0.0011005	478.9747699681175	46.852	2.0236	46.823	45.583	47.607	-0.028782					130	52	3	0	0	0	0.81219	1	3793	3793		8.7993	1.1199	1	237090			48306	6740	32496	32509	54548	54548					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9734802246094	3	478.973384	1433.89832	-0.72158	-0.00034562	3.2574	0.0015602	2.5358	0.0012146	478.97494935068806	47.94	1.1198	47.915	47.673	48.793	-0.025326					45	28	2	0	0	0	0.76892	1	4071	4071		17.833	3.0543	1	261310			48307	6740	32496	32509	54549	54549					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97344970703125	3	478.973384	1433.89832	-0.69274	-0.0003318	2.9962	0.0014351	2.3035	0.0011033	478.9746813820608	49.583	2.3312	49.559	48.401	50.732	-0.024033					111	53	3	0	0	0	0.76579	5	4198	4198;4232;4312;4324;4360		18.531	9.3192	1	142150			48308	6740	32496	32509	54550;54551;54552;54553;54554	54550					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3080749511719	3	478.973384	1433.89832	-0.59952	-0.00028715	3.054	0.0014628	2.4545	0.0011756	479.30919988874916	53.475	3.0495	53.45	51.564	54.614	-0.02475					117	77	2	0	0	0	0.81219	1	4748	4748		8.7993	1.1199	1	217940			48309	6740	32496	32509	54555	54555					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97369384765625	3	478.973384	1433.89832	-0.13683	-6.554E-05	3.0428	0.0014574	2.906	0.0013919	478.974750908379	57.254	1.3987	57.225	56.666	58.065	-0.02866					58	41	2	0	0	0	0.81219	1	5281	5281		8.7993	2.7983	1	137920			48310	6740	32496	32509	54556	54556					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9747314453125	3	478.973384	1433.89832	-1.9678	-0.00094254	3.1251	0.0014969	1.1573	0.00055432	479.30912300096907	43.377	1.5252	43.377	42.724	44.249	0.00016785					100	36	3	0	0	0	0.79716	2	3311	3311;3436		11.932	3.1331	1	374940			48311	6740	32496	32509	54557;54558	54557					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3096618652344	3	478.973384	1433.89832	-1.4024	-0.00067171	3.5342	0.0016928	2.1318	0.0010211	479.3093824668273	46.595	1.8758	46.59	45.62	47.496	-0.0041618					104	46	3	0	0	0	0.79716	1	3696	3696		11.932	3.1331	1	224330			48312	6740	32496	32509	54559	54559					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9745788574219	3	478.973384	1433.89832	-1.3068	-0.00062591	3.7757	0.0018085	2.469	0.0011826	478.9750986281663	49.151	3.7005	49.151	47.803	51.503	0.00016785					187	96	3	0	0	0	0.71207	3	4177	4177;4217;4253		29.551	9.6041	1	240410			48313	6740	32496	32509	54560;54561;54562	54560					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9735107421875	3	478.973384	1433.89832	-2.0196	-0.00096732	4.4654	0.0021388	2.4459	0.0011715	478.975508836348	58.396	1.2392	58.43	57.534	58.773	0.033905					55	37	2	0	0	0	0.79716	1	5287	5287		11.932	1.3705	1	86761			48314	6740	32496	32509	54563	54563					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9759521484375	3	478.973384	1433.89832	-0.91417	-0.00043786	2.5827	0.001237	1.6685	0.00079918	478.9746832148069	43.078	1.9449	43.084	42.148	44.093	0.0057487					98	52	3	0	0	0	0.81407	1	3000	3000		8.4073	0.72786	1	330000			48315	6740	32496	32509	54564	54564					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9745788574219	3	478.973384	1433.89832	-0.90815	-0.00043498	3.264	0.0015634	2.3558	0.0011284	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.75121	3	3390	3381;3390;3431		21.78	7.5206	1	368580			48316	6740	32496	32509	54565;54566;54567	54566					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3035888671875	3	478.973384	1433.89832	-0.90639	-0.00043414	3.3972	0.0016272	2.4909	0.0011931	479.3093505928146	47.758	1.3305	47.777	47.26	48.59	0.018967					62	39	2	0	0	0	0.79945	1	3556	3556		11.455	1.8085	1	302610			48317	6740	32496	32509	54568	54568					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9752197265625	3	478.973384	1433.89832	-0.90277	-0.0004324	3.3572	0.001608	2.4544	0.0011756	478.97487033218596	49.369	1.842	49.394	48.497	50.339	0.025578					115	47	3	0	0	0	0.78683	4	3748	3735;3748;3833;3865		14.086	4.4399	1	238510			48318	6740	32496	32509	54569;54570;54571;54572	54570					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9741516113281	3	478.973384	1433.89832	-0.90027	-0.0004312	3.5043	0.0016784	2.604	0.0012472	479.3094231457841	50.589	1.3321	50.619	49.948	51.28	0.029629					91	40	3	0	0	0	0.77205	1	3978	3978		17.167	7.5206	1	250790			48319	6740	32496	32509	54573	54573					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97491455078125	3	478.973384	1433.89832	-0.89818	-0.00043021	3.5722	0.001711	2.674	0.0012808	478.9750533889841	51.817	1.8474	51.852	50.982	52.829	0.034588					134	56	3	0	0	0	0.77205	1	4130	4130		17.167	5.2344	1	276750			48320	6740	32496	32509	54574	54574					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9744567871094	3	478.973384	1433.89832	-0.8898	-0.00042619	3.6621	0.001754	2.7723	0.0013278	478.97502977834864	56.875	1.1479	56.946	56.618	57.766	0.071835					88	55	2	0	0	0	0.76251	1	4850	4850		19.263	6.3052	1	207280			48321	6740	32496	32509	54575	54575					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97412109375	3	478.973384	1433.89832	0.29105	0.00013941	2	0.00095795	2.2911	0.0010974	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.77205	3	3411	3280;3378;3411		17.167	4.2093	1	395190			48322	6740	32496	32509	54576;54577;54578	54578					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9748229980469	3	478.973384	1433.89832	0.30578	0.00014646	2.3764	0.0011382	2.6822	0.0012847	478.97445511920006	47.863	1.3107	47.901	47.243	48.554	0.037731					72	41	3	0	0	0	0.80813	2	3637	3618;3637		9.6461	3.3864	1	244030			48323	6740	32496	32509	54579;54580	54580					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3094177246094	3	478.973384	1433.89832	0.32204	0.00015425	2.3016	0.0011024	2.6237	0.0012567	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.72374	2	3781	3781;3845		27.644	14.686	1	307830			48324	6740	32496	32509	54581;54582	54581					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9749755859375	3	478.973384	1433.89832	0.34157	0.0001636	2.1071	0.0010093	2.4487	0.0011729	478.9743151753571	51.804	1.1678	51.863	51.373	52.541	0.059719					70	37	2	0	0	0	0.79224	3	4151	4151;4189;4209		12.957	3.7457	1	347520			48325	6740	32496	32509	54583;54584;54585	54583					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9759826660156	3	478.973384	1433.89832	0.41435	0.00019846	1.9079	0.00091386	2.3223	0.0011123	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.81021	1	5286	5286		9.2118	0.41249	1	131420			48326	6740	32496	32509	54586	54586					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3084411621094	3	478.973384	1433.89832	-0.085377	-4.0893E-05	1.9381	0.0009283	1.8527	0.0008874	479.30837143687245	43.044	1.6592	42.994	42.147	43.806	-0.050308					106	44	4	0	0	0	0.77205	2	2941	2922;2941		17.167	3.6588	1	375540			48327	6740	32496	32509	54587;54588	54588					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3099670410156	3	478.973384	1433.89832	-0.20548	-9.8418E-05	2.5121	0.0012032	2.3066	0.0011048	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.76892	4	3398	3337;3398;3409;3527		17.833	7.5206	1	468190			48328	6740	32496	32509	54589;54590;54591;54592	54590					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9755554199219	3	478.973384	1433.89832	-0.25402	-0.00012167	2.9951	0.0014346	2.741	0.0013129	478.9747709878051	47.62	1.4426	47.532	47.242	48.685	-0.087646					53	40	2	0	0	0	0.78351	2	3639	3597;3639		14.779	2.346	1	370120			48329	6740	32496	32509	54593;54594	54594					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9742431640625	3	478.973384	1433.89832	-0.315	-0.00015088	2.7524	0.0013183	2.4374	0.0011675	478.9746652956354	49.514	1.8124	49.42	48.44	50.252	-0.093178					109	43	3	0	0	0	0.78683	3	3789	3789;3799;3820		14.086	5.6788	1	294110			48330	6740	32496	32509	54595;54596;54597	54595					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9751892089844	3	478.973384	1433.89832	-0.3619	-0.00017334	3.0729	0.0014719	2.711	0.0012985	478.9747142061381	50.735	1.3969	50.643	50.107	51.504	-0.091797					89	39	3	0	0	0	0.79224	1	4066	4066		12.957	1.0251	1	284170			48331	6740	32496	32509	54598	54598					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.306640625	3	478.973384	1433.89832	-0.41434	-0.00019846	3.0207	0.0014469	2.6064	0.0012484	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.77511	4	4222	4128;4175;4214;4222		16.53	5.0752	1	341610			48332	6740	32496	32509	54599;54600;54601;54602	54602					0.19872965947115517
RKILSRLFRVF	11	Unmodified	_RKILSRLFRVF_					0	0	0		ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	ENSG00000172081|ENST00000357066|MOB3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.9732666015625	3	478.973384	1433.89832	0.027199	1.3027E-05	1.196	0.00057284	1.2232	0.00058586	478.97388628432867	44.311	1.3695	44.761	44.003	45.372	0.45025					93	33	4	0	0	0	0.79716	1	4054	4054		11.932	0.47776	1	869860			48333	6740	32496	32509	54603	54603					0.19872965947115517
RKIMEVVIRSL	11	Unmodified	_RKIMEVVIRSL_					0	0	0			REV__ENSG00000124571|ENST00000265351|XPO5	REV__ENSG00000124571|ENST00000265351|XPO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.6086730957031	3	448.611235	1342.81188	-0.33073	-0.00014837	-3.8513	-0.0017277	-4.182	-0.0018761	448.60926417433876	75.297	1.2081	75.251	74.823	76.031	-0.045982					90	31	4	0	0	0	0.78391	1	7411	7411		14.694	1.7362	1	359860	+		48334	18594	32497	32510	54604	54604					0.1541821833029644
RKIRDRVC	8	Unmodified	_RKIRDRVC_					0	0	0			REV__ENSG00000109475|ENST00000394667|RPL34	REV__ENSG00000109475|ENST00000394667|RPL34	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3057861328125	2	523.30601	1044.59747	-0.83281	-0.00043582	-3.8682	-0.0020243	-4.701	-0.0024601	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.89494	1	8071	8071		37.159	3.6435	1	2778600	+		48335	15817	32498	32511	54605	54605					0.07695136025040483
RKIREELMSM	10	Unmodified	_RKIREELMSM_					0	0	0			REV__nc|ENSG00000175216|Q14008-2|CKAP5	REV__nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	646.8445434570312	2	646.844307	1291.67406	1.5134	0.0009789	1.2281	0.00079438	2.7414	0.0017733	646.8451814342149	51.738	0.47779	51.773	51.551	52.029	0.034588					24	15	2	0	0	0	0.80179	1	4148	4148		39.253	0.49923	1	142440	+		48336	22050	32499	32512	54606	54606					0.039891467393317726
RKISQIEKHK	10	Unmodified	_RKISQIEKHK_					0	0	0		HAL1_dup21739|chr20:4024584-4025416:+|1.1559220623866735|0.1385400223363406|3.06|63.0|15|2|sense	HAL1_dup21739|chr20:4024584-4025416:+|1.1559220623866735|0.1385400223363406|3.06|63.0|15|2|sense	HAL1_dup21739|chr20:4024584-4025416:+|1.1559220623866735|0.1385400223363406|3.06|63.0|15|2|sense	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.9271240234375	3	422.926211	1265.7568	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.839	1	58.953	58.453	59.453	0.11396								0	0	0	0.45132	1	5027	5027		16.007	1.3131	1				48337	14497	32500	32513	54607	54607					0.13455547854027827
RKISQRVIH	9	Unmodified	_RKISQRVIH_					0	0	0		ENSG00000122033|ENST00000381120|MTIF3	ENSG00000122033|ENST00000381120|MTIF3	ENSG00000122033|ENST00000381120|MTIF3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.7987060546875	2	568.854181	1135.69381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.729	1	63.849	63.349	64.349	0.12004								0	0	0	0.32469	1	5586	5586		21.96	1.9631	1				48338	3208	32501	32514	54608	54608					0.1313902685665198
RKISVAVP	8	Unmodified	_RKISVAVP_					0	0	0			REV__ENSG00000105738|ENST00000222345|SIPA1L3	REV__ENSG00000105738|ENST00000222345|SIPA1L3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2818908691406	2	435.281995	868.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.456	1	66.421	65.921	66.921	-0.035217								0	0	0	0.29498	1	6355	6355		26.796	0	1		+		48339	17567	32502	32515	54609	54609					0.10990385376658196
RKISVAVP	8	Unmodified	_RKISVAVP_					0	0	0			REV__ENSG00000105738|ENST00000222345|SIPA1L3	REV__ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77947998046875	2	435.281995	868.549437	0.083825	3.6488E-05	-1.1213	-0.00048807	-1.0374	-0.00045158	435.2815310902219	60.499	0.66784	60.466	60.319	60.987	-0.032509					31	19	2	0	0	0	0.4196	1	5763	5763		31.955	13.63	1	87877	+		48340	17567	32502	32515	54610	54610					0.10990385376658196
RKISVAVP	8	Unmodified	_RKISVAVP_					0	0	0			REV__ENSG00000105738|ENST00000222345|SIPA1L3	REV__ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7800598144531	2	435.281995	868.549437	0.30826	0.00013418	-1.4798	-0.00064412	-1.1715	-0.00050994	435.28135794302204	52.929	1.9368	52.999	52.552	54.489	0.070709					78	52	2	0	0	0	0.4196	1	4337	4337		47.916	5.4411	1	179240	+		48341	17567	32502	32515	54611	54611					0.10990385376658196
RKISVAVP	8	Unmodified	_RKISVAVP_					0	0	0			REV__ENSG00000105738|ENST00000222345|SIPA1L3	REV__ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	435.281995	868.549437	-0.93284	-0.00040605	-0.11676	-5.0822E-05	-1.0496	-0.00045687	435.2819888166949	62.903	0.67306	62.926	62.648	63.321	0.022987					45	29	2	0	0	0	0.4196	1	5534	5534		44.531	16.277	1	135060	+		48342	17567	32502	32515	54612	54612					0.10990385376658196
RKISVAVP	8	Unmodified	_RKISVAVP_					0	0	0			REV__ENSG00000105738|ENST00000222345|SIPA1L3	REV__ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	435.281995	868.549437	-0.28056	-0.00012212	-1.942	-0.00084532	-2.2226	-0.00096745	435.28125150673037	60.158	0.27344	60.711	60.581	60.855	0.55323	0.12234	-0.00065683	NaN	31.955	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	207170	+		48343	17567	32502	32515							0.10990385376658196
RKITLKTPLIS	11	Unmodified	_RKITLKTPLIS_					0	0	0		nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;ENSG00000106348|ENST00000338791|IMPDH1;ENST00000418838.1_1_X:40219448-40219874:-|nuORF	nc|ENSG00000106348|P20839-2|IMPDH1	nc|ENSG00000106348|P20839-2|IMPDH1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8927001953125	2	635.41628	1268.81801	-1.1741	-0.00074604	0.71498	0.00045431	-0.45912	-0.00029173	635.4164961376164	105.3	0.23689	105.37	105.22	105.46	0.073112					10	5	3	0	0	0	0.17385	1	11139	11139		19.104	0	1	153420			48344	2292	32503	32516	54613	54613					0.19435059833472224
RKIVMDFL	8	Unmodified	_RKIVMDFL_					0	0	0		ENSG00000166135|ENST00000299163|HIF1AN;ENST00000478787.1_1_10:102296230-102304880:+|nuORF	ENSG00000166135|ENST00000299163|HIF1AN	ENSG00000166135|ENST00000299163|HIF1AN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.29705810546875	2	511.296788	1020.57902	0.70365	0.00035977	0.69805	0.00035691	1.4017	0.00071668	511.29707692793426	16.607	0.36884	16.12	15.867	16.236	-0.48718					14	7	3	0	0	0	0.92457	1	155	155		47.916	0	1	291840			48345	6160	32504	32517	54614	54614					0.0695558133047598
RKIVVVVG	8	Unmodified	_RKIVVVVG_					0	0	0			REV__ENSG00000108107|ENST00000344063|RPL28	REV__ENSG00000108107|ENST00000344063|RPL28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.30010986328125	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.81548	1	6902	6902		20.482	5.8177	1	1680500	+		48346	17696	32505	32518	54615	54615					0.14627262273370434
RKIVVVVG	8	Unmodified	_RKIVVVVG_					0	0	0			REV__ENSG00000108107|ENST00000344063|RPL28	REV__ENSG00000108107|ENST00000344063|RPL28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2998352050781	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.81724	1	6914	6914		14.664	0	1	1702600	+		48347	17696	32505	32518	54616	54616					0.14627262273370434
RKIVVVVG	8	Unmodified	_RKIVVVVG_					0	0	0			REV__ENSG00000108107|ENST00000344063|RPL28	REV__ENSG00000108107|ENST00000344063|RPL28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.29974365234375	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.80963	1	7041	7041		15.636	0.97212	1	2081500	+		48348	17696	32505	32518	54617	54617					0.14627262273370434
RKIVVVVG	8	Unmodified	_RKIVVVVG_					0	0	0			REV__ENSG00000108107|ENST00000344063|RPL28	REV__ENSG00000108107|ENST00000344063|RPL28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.300048828125	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.83466	1	8309	8309		23.037	1.3344	1	5485100	+		48349	17696	32505	32518	54618	54618					0.14627262273370434
RKIWNAVAPIA	11	Unmodified	_RKIWNAVAPIA_					0	0	0			REV__ENSG00000163106|ENST00000295256|HPGDS	REV__ENSG00000163106|ENST00000295256|HPGDS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8694458007812	2	619.87204	1237.72953	-0.18235	-0.00011304	-3.8434	-0.0023824	-4.0258	-0.0024955	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.68378	2	9572	9572;9619		34.173	2.6427	1	2627900	+		48350	20883	32506	32519	54619;54620	54619					0.1201706431365892
RKIWNAVAPIA	11	Unmodified	_RKIWNAVAPIA_					0	0	0			REV__ENSG00000163106|ENST00000295256|HPGDS	REV__ENSG00000163106|ENST00000295256|HPGDS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8695678710938	2	619.87204	1237.72953	-0.30615	-0.00018977	-3.8344	-0.0023768	-4.1405	-0.0025666	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.67493	2	10279	10026;10279		35.618	1.1189	1	4796900	+		48351	20883	32506	32519	54621;54622	54622					0.1201706431365892
RKIWVPDI	8	Unmodified	_RKIWVPDI_					0	0	0		ENSG00000183185|ENST00000472788|GABRR3	ENSG00000183185|ENST00000472788|GABRR3	ENSG00000183185|ENST00000472788|GABRR3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8106689453125	2	513.808377	1025.6022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.146	1	55.173	54.673	55.673	0.027142								0	0	0	0.29245	1	4936	4936		30.504	3.8107	1				48352	7506	32507	32520	54623	54623					0.0904234343945518
RKKDKATKLH	10	Unmodified	_RKKDKATKLH_					0	0	0		L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|55|3|sense	L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|55|3|sense	L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|55|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9222106933594	3	408.922689	1223.74624	-1.9234	-0.00078652	0.84702	0.00034637	-1.0764	-0.00044016	408.9230151046432	104.46	2.832	104.56	103.59	106.42	0.093857					212	70	5	0	0	0	0.8651	1	11045	11045		24.232	1.6702	1	2027500			48353	14572	32508	32521	54624	54624					0.14331565199586294
RKKDKATKLH	10	Unmodified	_RKKDKATKLH_					0	0	0		L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|55|3|sense	L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|55|3|sense	L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|55|3|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	408.922689	1223.74624	2.7438	0.001122	-2.0975	-0.0008577	0.64634	0.0002643	409.2564810718027	104.22	1.6573	104.41	103.85	105.5	0.18887	-0.085509	-0.0035019	NaN	24.232	59	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156450			48354	14572	32508	32521							0.14331565199586294
RKKDKATKLH	10	Unmodified	_RKKDKATKLH_					0	0	0		L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|55|3|sense	L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|55|3|sense	L1MA9_dup10729|chr10:42350012-42352117:+|1.1317870787696125|0.3222337281286975|1.81|61.0|55|3|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	408.922689	1223.74624	3.5379	0.0014467	-4.2015	-0.0017181	-0.66365	-0.00027138	409.2553411569171	104.25	1.9019	104.48	104.08	105.98	0.2268	-0.013038	-0.0060831	NaN	24.232	75	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	214150			48355	14572	32508	32521							0.14331565199586294
RKKEGFPI	8	Unmodified	_RKKEGFPI_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.79150390625	2	487.792727	973.5709	-1.0855	-0.00052952	-3.4554	-0.0016855	-4.541	-0.0022151	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.88915	1	7575	7575		35.201	1.6851	1	309700	+		48356	15798	32509	32522	54625	54625					0.08305770405377189
RKKEVGIN	8	Unmodified	_RKKEVGIN_					0	0	0		nc|ENSG00000114439|Q8WY36-3|BBX	nc|ENSG00000114439|Q8WY36-3|BBX	nc|ENSG00000114439|Q8WY36-3|BBX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28778076171875	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.8621	1	10526	10526		26.693	2.1737	1	50843000			48357	14854	32510	32523	54626	54626					0.0874858239999412
RKKEVGIN	8	Unmodified	_RKKEVGIN_					0	0	0		nc|ENSG00000114439|Q8WY36-3|BBX	nc|ENSG00000114439|Q8WY36-3|BBX	nc|ENSG00000114439|Q8WY36-3|BBX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28790283203125	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.87792	1	9955	9955		31.53	4.8369	1	50946000			48358	14854	32510	32523	54627	54627					0.0874858239999412
RKKGGAGVTG	10	Unmodified	_RKKGGAGVTG_					0	0	0			REV__ENSG00000079841|ENST00000521978|RIMS1	REV__ENSG00000079841|ENST00000521978|RIMS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77752685546875	2	465.777608	929.540663	0.60386	0.00028126	-0.75167	-0.00035011	-0.14781	-6.8848E-05	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.86763	1	7934	7934		26.693	0	1	1082300	+		48359	16792	32511	32524	54628	54628					0.07307411740180214
RKKGRPTSP	9	Unmodified	_RKKGRPTSP_					0	0	0			REV__nc|ENSG00000171490|O76021-2|RSL1D1	REV__nc|ENSG00000171490|O76021-2|RSL1D1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8082885742188	2	513.811982	1025.60941	-1.4174	-0.00072826	-4.4658	-0.0022946	-5.8832	-0.0030229	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.7932	1	4108	4108		23.042	2.5607	1	1977600	+		48360	21736	32512	32525	54629	54629					0.09763076039894258
RKKHIYIPKNG	11	Unmodified	_RKKHIYIPKNG_					0	0	0		ENSG00000169154|ENST00000307599|GOT1L1	ENSG00000169154|ENST00000307599|GOT1L1	ENSG00000169154|ENST00000307599|GOT1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9428405761719	3	451.941973	1352.80409	-0.06697	-3.0266E-05	2.8157	0.0012725	2.7487	0.0012423	451.9431207678107	53.546	2.822	53.541	51.391	54.213	-0.0053711					204	73	4	0	0	0	0.78083	1	4637	4637		15.337	0.64381	1	724120			48361	6473	32513	32526	54630	54630					0.1417982712500816
RKKHIYIPKNG	11	Unmodified	_RKKHIYIPKNG_					0	0	0		ENSG00000169154|ENST00000307599|GOT1L1	ENSG00000169154|ENST00000307599|GOT1L1	ENSG00000169154|ENST00000307599|GOT1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.94317626953125	3	451.941973	1352.80409	-0.67633	-0.00030566	3.3865	0.0015305	2.7102	0.0012249	451.94335598806316	53.501	2.9355	53.476	51.367	54.303	-0.024754					205	72	4	0	0	0	0.77511	1	4680	4680		16.53	0	1	765750			48362	6473	32513	32526	54631	54631					0.1417982712500816
RKKHKQKLREK	11	Unmodified	_RKKHKQKLREK_					0	0	0			REV__ENSG00000275023|ENST00000621332|MLLT6	REV__ENSG00000275023|ENST00000621332|MLLT6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.9840393066406	3	493.651193	1477.93175	0.28936	0.00014284	-3.3881	-0.0016725	-3.0987	-0.0015297	493.6493656295497	44.418	1.6555	44.467	43.631	45.286	0.048996					106	39	4	0	0	0	0.7896	1	3110	3110		13.508	0	1	509790	+		48363	24007	32514	32527	54632	54632					0.21189967719078595
RKKILKIRHGW	11	Unmodified	_RKKILKIRHGW_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;ENST00000412573.1_1_7:89792322-89794045:+|nuORF	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9733581542969	3	478.977129	1433.90956	-1.6306	-0.00078103	-3.5128	-0.0016826	-5.1434	-0.0024636	478.97540943407233	47.987	1.2617	47.987	47.56	48.821	0					77	38	3	0	0	0	0.81021	1	3683	3683		9.2118	2.8909	1	195490			48364	5983	32515	32528	54633	54633					0.20995788041295782
RKKILKIRHGW	11	Unmodified	_RKKILKIRHGW_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;ENST00000412573.1_1_7:89792322-89794045:+|nuORF	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.974365234375	3	478.977129	1433.90956	-0.58257	-0.00027904	-4.3615	-0.0020891	-4.9441	-0.0023681	479.30946207671553	56.807	0.59378	56.781	56.673	57.266	-0.026108					48	28	2	0	0	0	0.76579	1	4814	4814		18.531	5.5736	1	273600			48365	5983	32515	32528	54634	54634					0.20995788041295782
RKKILKIRHGW	11	Unmodified	_RKKILKIRHGW_					0	0	0		ENSG00000164647|ENST00000297205|STEAP1;ENST00000412573.1_1_7:89792322-89794045:+|nuORF	ENSG00000164647|ENST00000297205|STEAP1	ENSG00000164647|ENST00000297205|STEAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9746398925781	3	478.977129	1433.90956	-0.64689	-0.00030985	-4.1835	-0.0020038	-4.8304	-0.0023137	478.9749929627301	58.599	1.6691	58.591	58.082	59.751	-0.0074387					98	61	3	0	0	0	0.7896	1	5078	5078		13.508	4.7086	1	163840			48366	5983	32515	32528	54635	54635					0.20995788041295782
RKKISGPN	8	Unmodified	_RKKISGPN_					0	0	0		ENSG00000147679|ENST00000309822|UTP23	ENSG00000147679|ENST00000309822|UTP23	ENSG00000147679|ENST00000309822|UTP23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2747802734375	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.80308	1	9430	9430		16.473	0	1	26247000			48367	4919	32516	32529	54636	54636					0.08152313228526964
RKKISPPTPK	10	Unmodified	_RKKISPPTPK_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1;ENST00000517412.1_1_5:67522458-67569396:+|nuORF	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3700561523438	2	576.36659	1150.71863	0.21884	0.00012613	3.6231	0.0020883	3.842	0.0022144	576.3685004407081	43.385	1.6048	43.335	42.606	44.211	-0.050308					89	39	3	0	0	0	0.8505	1	2974	2974		19.104	2.6304	1	327130			48368	4782	32517	32530	54637	54637					0.14929661939368088
RKKKAEREEYR	11	Unmodified	_RKKKAEREEYR_					0	0	0		nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;ENSG00000064042|ENST00000503057|LIMCH1	nc|ENSG00000064042|Q9UPQ0-9|LIMCH1	nc|ENSG00000064042|Q9UPQ0-9|LIMCH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.27923583984375	3	498.282946	1491.82701	0.19127	9.5308E-05	-0.14342	-7.1464E-05	0.047853	2.3844E-05	498.28272038181507	33.175	0.58385	33.285	32.974	33.558	0.10991					55	26	3	0	0	0	0.77205	1	1585	1585		17.167	0.44936	1	250960			48369	1097	32518	32531	54638	54638					0.1007680145185077
RKKKKIKT	8	Unmodified	_RKKKKIKT_					0	0	0		ENSG00000111845|ENST00000379568|PAK1IP1	ENSG00000111845|ENST00000379568|PAK1IP1	ENSG00000111845|ENST00000379568|PAK1IP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.8673095703125	2	515.366393	1028.71823	3.0895	0.0015922	-2.8503	-0.0014689	0.23922	0.00012328	515.3649456454685	109.06	0.4231	109.03	108.79	109.21	-0.029381					33	15	3	0	0	0	0.97365	1	12089	12089		3.6843	0.27433	1	2999800			48370	2616	32519	32532	54639	54639					0.20502287010185682
RKKKKRKRKGH	11	Unmodified	_RKKKKRKRKGH_					0	0	0			REV__ENSG00000055483|ENST00000449938|USP36	REV__ENSG00000055483|ENST00000449938|USP36	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.9963684082031	3	483.995294	1448.96405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.531	1	70.915	70.415	71.415	0.38416								0	0	0	0.56276	1	7819	7819		1.4188	0.096825	1		+		48371	16412	32520	32533	54640	54640					0.2575279991269781
RKKKMLAVF	9	Oxidation (M)	_RKKKM(Oxidation (M))LAVF_		RKKKM(1)LAVF		RKKKM(42)LAVF	0	0	1			REV__ENST00000296328.8_1_3:196089371-196089518:-|nuORF	REV__ENST00000296328.8_1_3:196089371-196089518:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8536376953125	2	568.852261	1135.68997	0.52259	0.00029728	0.88949	0.00050599	1.4121	0.00080327	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.67235	1	11024	11024		42.474	7.2737	1	84800000	+		48372	24709	32521	32534	54641	54641		385			0.12755221038560194
RKKKQNKSF	9	Unmodified	_RKKKQNKSF_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3535766601562	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.11	1	113.08	112.58	113.58	-0.024811								0	0	0	0.31828	1	12510	12510		24.203	2.2429	1		+		48373	24295	32522	32535	54642	54642					0.11863607136797327
RKKLFPNG	8	Unmodified	_RKKLFPNG_					0	0	0		ENSG00000147251|ENST00000276202|DOCK11	ENSG00000147251|ENST00000276202|DOCK11	ENSG00000147251|ENST00000276202|DOCK11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.2923889160156	2	480.292894	958.571235	-0.95985	-0.00046101	-0.23874	-0.00011467	-1.1986	-0.00057567	480.2926803782629	29.996	0.753	29.981	29.577	30.33	-0.015167					23	17	2	0	0	0	0.86288	1	1558	1558		26.796	1.3459	1	38009			48374	4892	32523	32536	54643	54643					0.09029190125238529
RKKLFRLYL	9	Unmodified	_RKKLFRLYL_					0	0	0			REV__ENST00000526700.5_1_16:70530266-70542451:-|nuORF	REV__ENST00000526700.5_1_16:70530266-70542451:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	618.9017944335938	2	618.9006	1235.78665	-0.70301	-0.00043509	4.3137	0.0026698	3.6107	0.0022347	618.9030490497685	88.787	0.85529	89.258	89.075	89.93	0.47068					60	20	4	0	0	0	0.76996	1	10514	10514		33.516	13.485	1	1768000	+		48375	17383	32524	32537	54644	54644					0.17818531590046405
RKKLFSKSK	9	Unmodified	_RKKLFSKSK_					0	0	0		ENST00000496726.5_1_3:25777437-25777596:-|nuORF	ENST00000496726.5_1_3:25777437-25777596:-|nuORF	ENST00000496726.5_1_3:25777437-25777596:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3624267578125	2	561.361308	1120.70806	-0.061787	-3.4685E-05	3.5032	0.0019666	3.4414	0.0019319	561.3631099932169	44.376	1.0511	44.826	44.16	45.211	0.45024					79	25	4	0	0	0	0.7932	1	4028	4028		19.997	3.2794	1	3514300			48376	12790	32525	32538	54645	54645					0.15253679284933241
RKKLKIIPED	10	Unmodified	_RKKLKIIPED_					0	0	0		ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	ENSG00000121064|ENST00000262288|SCPEP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.93255615234375	3	413.930962	1238.77106	0.23139	9.5777E-05	4.1873	0.0017332	4.4187	0.001829	413.9326448757643	44.768	3.3816	44.817	43.631	47.012	0.048996					183	86	4	0	0	0	0.85259	1	3279	3279		20.03	0.92695	1	706670			48377	3165	32526	32539	54646	54646					0.161222002823024
RKKLKKKG	8	Unmodified	_RKKLKKKG_					0	0	0		ENST00000442210.2_1_12:123465790-123467130:+|nuORF;nc|ENSG00000182196|Q66PJ3-5|ARL6IP4;nc|ENSG00000182196|Q66PJ3-10|ARL6IP4;nc|ENSG00000182196|Q66PJ3-9|ARL6IP4;chr12:122980385-122981129|57|19.07|0.95|4.33|+|ENST00000426960|ARL6IP4,ARL6IP4;nc|ENSG00000182196|Q66PJ3-7|ARL6IP4;ENSG00000182196|ENST00000315580|ARL6IP4;ENST00000539576.5_1_12:123465834-123466670:+|nuORF;nc|ENSG00000182196|Q66PJ3-4|ARL6IP4;nc|ENSG00000182196|Q66PJ3-3|ARL6IP4;nc|ENSG00000182196|Q66PJ3-2|ARL6IP4;nc|ENSG00000182196|Q66PJ3-1|ARL6IP4	ENST00000442210.2_1_12:123465790-123467130:+|nuORF	ENST00000442210.2_1_12:123465790-123467130:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.34832763671875	2	493.353286	984.692019	2.8482	0.0014052	-3.2954	-0.0016258	-0.44719	-0.00022062	493.35151589544125	109.11	0.44239	109.08	108.79	109.23	-0.029388					23	16	2	0	0	0	0.4196	1	12115	12115		13.775	0.81615	1	2398900			48378	114	32527	32540	54647	54647					0.19906017838707157
RKKLMEIFHII	11	Unmodified	_RKKLMEIFHII_					0	0	0		nc|ENSG00000100325|Q9H1I8-2|ASCC2;ENST00000458594.5_1_22:30197094-30223519:-|nuORF;nc|ENSG00000100325|Q9H1I8-3|ASCC2;ENSG00000100325|ENST00000307790|ASCC2;ENST00000472433.5_1_22:30184624-30209474:-|nuORF	nc|ENSG00000100325|Q9H1I8-2|ASCC2	nc|ENSG00000100325|Q9H1I8-2|ASCC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6240234375	3	476.623364	1426.84826	2.8124	0.0013405	-2.6485	-0.0012624	0.16387	7.8106E-05	476.622006004692	107.89	0.57175	107.86	107.34	107.92	-0.031487					38	13	5	0	0	0	0.76579	1	11973	11973		18.531	0.69791	1	133400000			48379	1824	32528	32541	54648	54648					0.1519109522701001
RKKLRGKKMA	10	Unmodified	_RKKLRGKKMA_					0	0	0		nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170004|Q12873-2|CHD3;ENSG00000170004|ENST00000330494|CHD3;ENST00000572579.1_1_17:7796637-7797935:+|nuORF	nc|ENSG00000170004|Q12873-3|CHD3	nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.93280029296875	3	405.932531	1214.77576	0.15529	6.3036E-05	0.75614	0.00030694	0.91143	0.00036998	405.9327475645885	36.626	1.2302	36.73	36.086	37.317	0.10306					79	36	3	0	0	0	0.85981	1	2042	2042		35.152	16.621	1	141990			48380	15087	32529	32542	54649	54649					0.17696805944115113
RKKMCLVNL	9	Unmodified	_RKKMCLVNL_					0	0	0		ENST00000483409.1_1_6:7303794-7313353:-|nuORF	ENST00000483409.1_1_6:7303794-7313353:-|nuORF	ENST00000483409.1_1_6:7303794-7313353:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.8250732421875	2	552.822647	1103.63074	0.24223	0.00013391	2.8109	0.0015539	3.0532	0.0016879	552.8240262062169	77.847	0.71408	77.971	77.695	78.409	0.12485					57	23	3	0	0	0	0.38563	1	7309	7309		58.782	12.81	1	625310			48381	12511	32530	32543	54650	54650					0.08307001752746146
RKKNKLKKCFR	11	Unmodified	_RKKNKLKKCFR_					0	0	0			REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	REV__ENST00000313843.7_1_16:31051123-31051483:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.6401062011719	3	483.638007	1447.89219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.31	1	117.3	116.8	117.8	-0.014999								0	0	0	0.56276	1	14025	14025		6.001	1.9181	1		+		48382	24927	32531	32544	54651	54651					0.1861612444399725
RKKPAPLF	8	Unmodified	_RKKPAPLF_					0	0	0			REV__ENST00000409365.5_2_2:183291437-183291587:-|nuORF	REV__ENST00000409365.5_2_2:183291437-183291587:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8052673339844	2	478.805637	955.596721	-1.2024	-0.0005757	2.6266	0.0012576	1.4242	0.00068191	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.82464	1	2672	2672		21.702	1.2205	1	361300	+		48383	26343	32532	32545	54652	54652					0.11714664647649897
RKKPLSGN	8	Unmodified	_RKKPLSGN_					0	0	0		ENST00000460489.1_1_13:50096192-50097385:+|nuORF;ENST00000488605.1_1_13:50096192-50101394:+|nuORF;nc|ENSG00000136147|Q9UIL8-2|PHF11;ENSG00000136147|ENST00000378319|PHF11	ENST00000460489.1_1_13:50096192-50097385:+|nuORF	ENST00000460489.1_1_13:50096192-50097385:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2747497558594	2	450.274701	898.534849	-1.0413	-0.00046886	1.2903	0.00058099	0.24902	0.00011213	450.2751780304547	97.596	1.8622	97.596	96.898	98.76	0					87	44	3	0	0	0	0.89962	1	9794	9794		38.806	5.2906	1	262970			48384	4092	32533	32546	54653	54653					0.08152313228526964
RKKPMVVV	8	Unmodified	_RKKPMVVV_					0	0	0			REV__ENSG00000104824|ENST00000221419|HNRNPL	REV__ENSG00000104824|ENST00000221419|HNRNPL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8063049316406	2	478.807322	955.600092	-1.7281	-0.00082743	-1.5753	-0.00075426	-3.3034	-0.0015817	478.806439205216	41.295	1.2034	41.295	40.815	42.018	0					75	35	3	0	0	0	0.82464	1	2740	2740		21.702	0	1	280900	+		48385	17476	32534	32547	54654	54654					0.12051591430019926
RKKPMVVV	8	Unmodified	_RKKPMVVV_					0	0	0			REV__ENSG00000104824|ENST00000221419|HNRNPL	REV__ENSG00000104824|ENST00000221419|HNRNPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.80523681640625	2	478.807322	955.600092	-2.2897	-0.0010963	-1.2612	-0.00060387	-3.5509	-0.0017002	478.80658371263473	41.743	1.2165	41.746	40.986	42.202	0.0034142					57	30	2	0	0	0	0.81548	1	3116	3116		20.482	4.0087	1	281640	+		48386	17476	32534	32547	54655	54655					0.12051591430019926
RKKPMVVV	8	Unmodified	_RKKPMVVV_					0	0	0			REV__ENSG00000104824|ENST00000221419|HNRNPL	REV__ENSG00000104824|ENST00000221419|HNRNPL	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8055114746094	2	478.807322	955.600092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.44	1	38.382	37.882	38.882	-0.057915								0	0	0	0.30316	1	2275	2275		42.474	15.678	1		+		48387	17476	32534	32547	54656	54656					0.12051591430019926
RKKPRRPPKR	10	Unmodified	_RKKPRRPPKR_					0	0	0			REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.29241943359375	3	440.29334	1317.85819	0.36311	0.00015988	-2.5683	-0.0011308	-2.2052	-0.00097093	440.2919928155031	58.022	1.2392	58.056	57.534	58.773	0.033905					105	37	4	0	0	0	0.91151	1	5312	5312		7.3997	0.38104	1	302530	+		48388	29312	32535	32548	54657	54657					0.21197464067245164
RKKPRRPPKR	10	Unmodified	_RKKPRRPPKR_					0	0	0			REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2916259765625	3	440.29334	1317.85819	0.37061	0.00016318	-2.5322	-0.0011149	-2.1616	-0.00095173	440.29198732058745	59.638	1.194	59.752	59.25	60.444	0.11396					105	36	4	0	0	0	0.85285	1	5111	5111		16.717	6.1306	1	260900	+		48389	29312	32535	32548	54658	54658					0.21197464067245164
RKKPSVAFKKP	11	Unmodified	_RKKPSVAFKKP_					0	0	0		ENSG00000176771|ENST00000409261|NCKAP5	ENSG00000176771|ENST00000409261|NCKAP5	ENSG00000176771|ENST00000409261|NCKAP5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4059448242188	2	643.408789	1284.80303	0.024153	1.554E-05	-2.8	-0.0018015	-2.7758	-0.001786	643.4073313468332	107.75	0.43301	107.75	107.4	107.83	0					29	10	3	0	0	0	0.72739	1	11194	11194		27.047	3.5246	1	6606600			48390	7097	32536	32549	54659	54659					0.17201612756116447
RKKPSVAFKKP	11	Unmodified	_RKKPSVAFKKP_					0	0	0		ENSG00000176771|ENST00000409261|NCKAP5	ENSG00000176771|ENST00000409261|NCKAP5	ENSG00000176771|ENST00000409261|NCKAP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4063720703125	2	643.408789	1284.80303	1.777	0.0011433	-4.4559	-0.002867	-2.6789	-0.0017236	643.4059831518348	106.95	1.1451	106.98	106.72	107.86	0.03688					79	26	4	0	0	0	0.72106	1	11730	11730		28.081	3.5623	1	1597700			48391	7097	32536	32549	54660	54660					0.17201612756116447
RKKRIEKPRR	10	Unmodified	_RKKRIEKPRR_					0	0	0		ENST00000433877.6_1_12:122990076-123005058:-|nuORF;nc|ENSG00000111011|Q7L4I2-2|RSRC2;ENSG00000111011|ENST00000331738|RSRC2	ENST00000433877.6_1_12:122990076-123005058:-|nuORF	ENST00000433877.6_1_12:122990076-123005058:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.29693603515625	3	456.300383	1365.87932	-0.3857	-0.000176	-2.9755	-0.0013577	-3.3612	-0.0015337	456.2988994913002	76.3	0.70937	76.7	76.367	77.077	0.3997					37	17	3	0	0	0	0.8492	1	8694	8694		18.531	8.4272	1	291170			48392	2557	32537	32550	54661	54661					0.21101429376085434
RKKRKRPKGPK	11	Unmodified	_RKKRKRPKGPK_					0	0	0			REV__nc|ENSG00000170004|Q12873-3|CHD3	REV__nc|ENSG00000170004|Q12873-3|CHD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.30963134765625	3	460.312511	1377.9157	-2.4094	-0.0011091	-2.7841	-0.0012816	-5.1935	-0.0023906	460.31115668533715	40.471	1.1873	40.863	40.05	41.237	0.39209					73	31	3	0	0	0	0.81407	1	3491	3491		8.4073	2.4062	1	7212400	+		48393	30022	32538	32551	54662	54662					0.2418630627280436
RKKRLRQAPAP	11	Unmodified	_RKKRLRQAPAP_					0	0	0			REV__nc|ENSG00000112041|O00294-2|TULP1	REV__nc|ENSG00000112041|O00294-2|TULP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2548522949219	3	440.94935	1319.82622	-0.56534	-0.00024929	4.2166	0.0018593	3.6513	0.00161	441.284762298858	67.133	0.69202	67.097	66.948	67.64	-0.035698					52	30	3	0	0	0	0.17375	1	6435	6435		30.569	13.101	1	123410	+		48394	17911	32539	32552	54663	54663					0.17910051593457865
RKKRMQKYLWG	11	Unmodified	_RKKRMQKYLWG_					0	0	0			REV__ENST00000539256.5_1_12:19282733-19418734:+|nuORF	REV__ENST00000539256.5_1_12:19282733-19418734:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.6231689453125	3	498.622246	1492.84491	-0.24645	-0.00012288	1.952	0.00097329	1.7055	0.00085041	498.62308144457916	21.663	1.0696	21.599	21.115	22.184	-0.064743					82	38	3	0	0	0	0.78683	1	653	653		14.086	1.1285	1	61443	+		48395	28447	32540	32553	54664	54664					0.11819845172999521
RKKRRKEAAH	10	Unmodified	_RKKRRKEAAH_					0	0	0			REV__nc|ENSG00000170264|Q3B820-2|FAM161A	REV__nc|ENSG00000170264|Q3B820-2|FAM161A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3954467773438	2	640.394536	1278.77452	0.51396	0.00032914	-3.1553	-0.0020207	-2.6414	-0.0016915	640.3923882876153	53.544	0.83096	53.626	53.252	54.083	0.081524					35	21	2	0	0	0	0.85958	1	4385	4385		15.642	0.77694	1	183090	+		48396	21640	32541	32554	54665	54665					0.1462830789957934
RKKRRPKER	9	Unmodified	_RKKRRPKER_					0	0	0			REV__nc|ENSG00000168658|Q502W6-5|VWA3B	REV__nc|ENSG00000168658|Q502W6-5|VWA3B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.60400390625	3	418.605695	1252.79525	-1.7442	-0.00073012	-0.50029	-0.00020942	-2.2445	-0.00093954	418.60537062211796	49.043	4.3192	49.043	47.911	52.23	0					175	108	3	0	0	0	0.75725	1	3778	3778		36.447	1.2685	1	101990	+		48397	21509	32542	32555	54666	54666					0.17896898279218476
RKKTILLTK	9	Unmodified	_RKKTILLTK_					0	0	0			REV__ENST00000490180.2_1_14:65197520-65198405:+|nuORF	REV__ENST00000490180.2_1_14:65197520-65198405:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.3803100585938	2	550.879333	1099.74411	3.4101	0.0018786	-3.6109	-0.0019892	-0.20073	-0.00011058	550.8772112738451	108.99	0.56081	108.96	108.67	109.23	-0.029381					52	22	3	0	0	0	0.7932	1	12067	12067		14.137	1.1779	1	2297500	+		48398	18714	32543	32556	54667	54667					0.19823136461786817
RKKTILLTK	9	Unmodified	_RKKTILLTK_					0	0	0			REV__ENST00000490180.2_1_14:65197520-65198405:+|nuORF	REV__ENST00000490180.2_1_14:65197520-65198405:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.8792114257812	2	550.879333	1099.74411	1.2771	0.00070354	-1.3833	-0.00076203	-0.10617	-5.8487E-05	550.8784430359498	108.9	0.52892	108.94	108.73	109.25	0.034355					60	25	3	0	0	0	0.7932	3	11981	11951;11964;11981		17.365	5.9362	1	2842700	+		48399	18714	32543	32556	54668;54669;54670	54670					0.19823136461786817
RKKVCQIGLN	10	Unmodified	_RKKVCQIGLN_					0	0	0			REV__nc|ENSG00000173039|Q04206-2|RELA	REV__nc|ENSG00000173039|Q04206-2|RELA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	579.8439331054688	2	579.842425	1157.6703	0.88069	0.00051066	1.9179	0.0011121	2.7986	0.0016227	579.843435527032	102.18	1.0887	102.31	101.93	103.02	0.13523					81	26	4	0	0	0	0.86718	1	10769	10769		27.882	0	1	2076300	+		48400	21881	32544	32557	54671	54671					0.09776845027840864
RKKVCQIGLN	10	Unmodified	_RKKVCQIGLN_					0	0	0			REV__nc|ENSG00000173039|Q04206-2|RELA	REV__nc|ENSG00000173039|Q04206-2|RELA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	579.8439331054688	2	579.842425	1157.6703	-1.355	-0.00078567	4.169	0.0024174	2.814	0.0016317	579.8447437223629	102.17	1.0869	102.31	101.93	103.02	0.13569					79	26	4	0	0	0	0.8651	2	10731	10695;10731		26.693	0	1	2038000	+		48401	21881	32544	32557	54672;54673	54673					0.09776845027840864
RKKVSPFV	8	Unmodified	_RKKVSPFV_					0	0	0			REV__ENST00000483254.1_1_9:119135964-119158892:+|nuORF	REV__ENST00000483254.1_1_9:119135964-119158892:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8011474609375	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.86288	1	9641	9641		26.796	3.7594	1	17379000	+		48402	27484	32545	32558	54674	54674					0.11022360785045748
RKKWWQWRRRK	11	Unmodified	_RKKWWQWRRRK_					0	0	0			REV__ENST00000324344.8_1_16:20911624-20911678:-|nuORF	REV__ENST00000324344.8_1_16:20911624-20911678:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.341064453125	3	572.006081	1712.99641	0.43825	0.00025068	-1.7172	-0.00098224	-1.2789	-0.00073155	572.0049750560728	31.305	0.1568	31.363	31.246	31.403	0.058315					10	7	2	0	0	0	0.91779	1	1411	1411		1.523	0.10423	1	59055	+		48403	25045	32546	32559	54675	54675					0.16843587315679542
RKKWWQWRRRK	11	Unmodified	_RKKWWQWRRRK_					0	0	0			REV__ENST00000324344.8_1_16:20911624-20911678:-|nuORF	REV__ENST00000324344.8_1_16:20911624-20911678:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	572.00146484375	3	572.006081	1712.99641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.503	1	26.531	26.031	27.031	0.02817								0	0	0	0.56276	1	1013	1013		0.37141	0	1		+		48404	25045	32546	32559	54676	54676					0.16843587315679542
RKKWWQWRRRK	11	Unmodified	_RKKWWQWRRRK_					0	0	0			REV__ENST00000324344.8_1_16:20911624-20911678:-|nuORF	REV__ENST00000324344.8_1_16:20911624-20911678:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	572.006081	1712.99641	0.43825	0.00025068	-1.7172	-0.00098224	-1.2789	-0.00073155	572.0049750560728	31.305	0.1568	31.363	31.246	31.403	0.058315	0.0798	-6.8603E-05	NaN	1.523	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59055	+		48405	25045	32546	32559							0.16843587315679542
RKKWWQWRRRK	11	Unmodified	_RKKWWQWRRRK_					0	0	0			REV__ENST00000324344.8_1_16:20911624-20911678:-|nuORF	REV__ENST00000324344.8_1_16:20911624-20911678:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	572.006081	1712.99641	0.24457	0.00013989	-1.6184	-0.00092571	-1.3738	-0.00078581	572.004404254622	31.092	0.13324	31.204	31.121	31.254	0.11198	-0.0798	0.00010099	NaN	1.523	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85757	+		48406	25045	32546	32559							0.16843587315679542
RKLAAPVI	8	Unmodified	_RKLAAPVI_					0	0	0		nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6;nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-5|MARCHF6	nc|ENSG00000145495|O60337-5|MARCHF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.2925109863281	2	434.292362	866.570172	-1.5915	-0.00069117	1.699	0.00073787	0.10753	4.6698E-05	434.2929791362948	74.024	0.92229	74.151	73.732	74.655	0.1271					69	37	2	0	0	0	0.86288	1	6836	6836		26.796	0	1	1163100			48407	4773	32547	32560	54677	54677					0.13154975756322074
RKLAKLFESK	10	Unmodified	_RKLAKLFESK_					0	0	0			REV__nc|ENSG00000062194|Q86WP2-4|GPBP1	REV__nc|ENSG00000062194|Q86WP2-4|GPBP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7852478027344	3	407.255557	1218.74484	0.96257	0.00039201	-1.357	-0.00055264	-0.39442	-0.00016063	407.25502443190675	33.66	0.32845	33.965	33.871	34.2	0.30495					14	7	3	0	0	0	0.37624	1	2462	2462		17.833	0	1	60963	+		48408	16460	32548	32561	54678	54678					0.1442193111083725
RKLDYPLFLAE	11	Unmodified	_RKLDYPLFLAE_					0	0	0			REV__nc|ENSG00000135372|Q9H0A0-2|NAT10	REV__nc|ENSG00000135372|Q9H0A0-2|NAT10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.24871826171875	3	455.590605	1363.74999	-0.072391	-3.2981E-05	-3.3651	-0.0015331	-3.4375	-0.0015661	455.5889066574011	54.066	0.61962	54.061	53.768	54.388	-0.0053711					31	19	2	0	0	0	0.17289	1	4756	4756		34.087	27.068	1	180910	+		48409	19213	32549	32562	54679	54679					0.08266190182825994
RKLDYPLFLAE	11	Unmodified	_RKLDYPLFLAE_					0	0	0			REV__nc|ENSG00000135372|Q9H0A0-2|NAT10	REV__nc|ENSG00000135372|Q9H0A0-2|NAT10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	455.590605	1363.74999	0.33774	0.00015387	-4.3546	-0.0019839	-4.0168	-0.00183	455.5885681251189	54.067	0.35825	54.148	53.854	54.212	0.081528	0.12207	-0.0015611	NaN	34.087	9	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37126	+		48410	19213	32549	32562							0.08266190182825994
RKLDYPLFLAE	11	Unmodified	_RKLDYPLFLAE_					0	0	0			REV__nc|ENSG00000135372|Q9H0A0-2|NAT10	REV__nc|ENSG00000135372|Q9H0A0-2|NAT10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	455.590605	1363.74999	-0.54755	-0.00024946	-5.2583	-0.0023956	-5.8058	-0.0026451	455.58829861680226	53.93	0.16584	53.868	53.724	53.89	-0.062065	-0.15854	-0.0027963	NaN	34.087	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38163	+		48411	19213	32549	32562							0.08266190182825994
RKLEDNEQD	9	Unmodified	_RKLEDNEQD_					0	0	0			REV__ENSG00000198707|ENST00000552810|CEP290	REV__ENSG00000198707|ENST00000552810|CEP290	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.7711791992188	2	573.772916	1145.53128	-1.1839	-0.00067926	-1.0763	-0.00061757	-2.2602	-0.0012968	573.7720534159134	37.932	0.80771	37.943	37.55	38.358	0.011173					38	18	3	0	0	0	0.35373	1	2570	2570		60.972	0.85368	1	318640	+		48412	23359	32550	32563	54680	54680					-0.03566446126660594
RKLESLSLVGT	11	Unmodified	_RKLESLSLVGT_					0	0	0			REV__nc|ENSG00000173698|Q8IZP9-10|ADGRG2	REV__nc|ENSG00000173698|Q8IZP9-10|ADGRG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.8582763671875	2	601.858795	1201.70304	-0.24099	-0.00014504	-1.5802	-0.00095104	-1.8212	-0.0010961	601.8577844533773	103.4	2.3202	103.45	103.07	105.39	0.041481					122	55	4	0	0	0	0.68532	1	11204	11204		33.922	4.7516	1	1412200	+		48413	21945	32551	32564	54681	54681					0.11025330631650831
RKLFKKKSSGS	11	Unmodified	_RKLFKKKSSGS_					0	0	0		ENSG00000214694|ENST00000409978|ARHGEF33	ENSG00000214694|ENST00000409978|ARHGEF33	ENSG00000214694|ENST00000409978|ARHGEF33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5920104980469	3	422.594461	1264.76155	-0.18605	-7.8623E-05	-4.1752	-0.0017644	-4.3613	-0.0018431	422.59257278124653	58.831	1.5397	58.817	57.968	59.508	-0.013729					80	49	3	0	0	0	0.75457	1	5435	5435		21.032	1.0018	1	107360			48414	8633	32552	32565	54682	54682					0.13976431996798055
RKLFLCVQGT	10	Unmodified	_RKLFLCVQGT_					0	0	0			REV__ENST00000466876.1_1_3:195006441-195012466:-|nuORF	REV__ENST00000466876.1_1_3:195006441-195012466:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.832763671875	2	582.831526	1163.6485	2.3168	0.0013503	-0.37374	-0.00021783	1.943	0.0011325	582.8313275695042	94.548	3.2085	94.489	93.331	96.54	-0.059212					184	75	3	0	0	0	0.86763	1	10028	10028		26.693	0	1	663000	+		48415	18039	32553	32566	54683	54683					0.07322040279223074
RKLFLGELIY	10	Unmodified	_RKLFLGELIY_					0	0	0		ENSG00000007541|ENST00000321878|PIGQ;ENST00000480424.6_1_16:630665-633032:+|nuORF;ENST00000476438.1_1_16:632096-633032:+|nuORF	ENSG00000007541|ENST00000321878|PIGQ;ENST00000476438.1_1_16:632096-633032:+|nuORF	ENST00000476438.1_1_16:632096-633032:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3273315429688	2	626.376623	1250.73869	-0.068938	-4.3181E-05	0.61248	0.00038364	0.54354	0.00034046	626.3769044153142	53.382	0.394	53.405	53.119	53.513	0.022541					13	11	2	0	0	0	0.37624	1	4678	4678		47.657	14.845	1	43958			48416	728;12338	32554	32567	54684	54684					0.12335412879338037
RKLGAPAL	8	Unmodified	_RKLGAPAL_					0	0	0		nc|ENSG00000172478|Q08AI8-3|MAB21L4;nc|ENSG00000172478|Q08AI8-2|MAB21L4;ENSG00000172478|ENST00000388934|MAB21L4	nc|ENSG00000172478|Q08AI8-3|MAB21L4	nc|ENSG00000172478|Q08AI8-3|MAB21L4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2677307128906	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.80963	1	2275	2275		15.636	0.97212	1	268720			48417	6772	32555	32568	54685	54685					0.10394116205168302
RKLGRVKPPN	10	Unmodified	_RKLGRVKPPN_					0	0	0			REV__ENST00000378887.3_1_19:36486520-36486634:+|nuORF	REV__ENST00000378887.3_1_19:36486520-36486634:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.868896484375	2	582.869831	1163.72511	0.10187	5.9377E-05	-2.0182	-0.0011763	-1.9163	-0.0011169	582.8686105160244	102.31	0.9475	102.35	101.93	102.88	0.043198					58	22	4	0	0	0	0.86718	1	11070	11070		27.882	5.3026	1	776660	+		48418	25906	32556	32569	54686	54686					0.14979599890762074
RKLGSARAPA	10	Unmodified	_RKLGSARAPA_					0	0	0		ENST00000528318.5_1_8:42716773-42751856:-|nuORF;ENST00000526349.5_1_8:42729111-42751823:-|nuORF;ENST00000534961.5_1_8:42742976-42751856:-|nuORF	ENST00000528318.5_1_8:42716773-42751856:-|nuORF	ENST00000528318.5_1_8:42716773-42751856:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8089599609375	2	513.811982	1025.60941	-1.4445	-0.00074222	-4.4488	-0.0022859	-5.8934	-0.0030281	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.86218	1	3715	3715		32.812	4.9302	1	1675700			48419	13299	32557	32570	54687	54687					0.09763076039894258
RKLHLSVF	8	Unmodified	_RKLHLSVF_					0	0	0		nc|ENSG00000134207|Q5T7P8-2|SYT6;ENSG00000134207|ENST00000610222|SYT6	nc|ENSG00000134207|Q5T7P8-2|SYT6	nc|ENSG00000134207|Q5T7P8-2|SYT6	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.3012390136719	2	500.308544	998.602535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.143	1	81.256	80.756	81.756	0.11286								0	0	0	0.29344	1	7716	7716		31.955	5.1588	1				48420	3916	32558	32571	54688	54688					0.10317763159321203
RKLIEQGN	8	Unmodified	_RKLIEQGN_					0	0	0		nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	nc|ENSG00000156313|Q92834|RPGR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27764892578125	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.89962	1	7867	7867		38.806	2.3594	1	1785900			48421	15012	32559	32572	54689	54689					0.060319920203255606
RKLIERLTDIP	11	Unmodified	_RKLIERLTDIP_					0	0	0			REV__nc|ENSG00000011451|O95785|WIZ	REV__nc|ENSG00000011451|O95785|WIZ	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.94317626953125	3	451.945271	1352.81398	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.424	1	54.479	53.979	54.979	0.055614								0	0	0	0.56276	1	4499	4499		27.644	5.0823	1		+		48422	16186	32560	32573	54690	54690					0.15168970339755106
RKLILIGG	8	Unmodified	_RKLILIGG_					0	0	0			REV__ENST00000434457.6_2_9:19360473-19369888:+|nuORF	REV__ENST00000434457.6_2_9:19360473-19369888:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3002624511719	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.81724	3	6540	6540;6787;6949		14.664	0.88877	1	1072400	+		48423	26666	32561	32574	54691;54692;54693	54691					0.14627262273381803
RKLILIGG	8	Unmodified	_RKLILIGG_					0	0	0			REV__ENST00000434457.6_2_9:19360473-19369888:+|nuORF	REV__ENST00000434457.6_2_9:19360473-19369888:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2994079589844	2	435.300188	868.585822	-0.33292	-0.00014492	0.65367	0.00028454	0.32075	0.00013962	435.30030600334584	75.563	1.7203	75.517	74.991	76.711	-0.045975					102	48	3	0	0	0	0.81724	1	7522	7522		14.664	0	1	492420	+		48424	26666	32561	32574	54694	54694					0.14627262273381803
RKLILIGG	8	Unmodified	_RKLILIGG_					0	0	0			REV__ENST00000434457.6_2_9:19360473-19369888:+|nuORF	REV__ENST00000434457.6_2_9:19360473-19369888:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3001403808594	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.86294	1	6670	6670		8.8223	0	1	2081500	+		48425	26666	32561	32574	54695	54695					0.14627262273381803
RKLILIGG	8	Unmodified	_RKLILIGG_					0	0	0			REV__ENST00000434457.6_2_9:19360473-19369888:+|nuORF	REV__ENST00000434457.6_2_9:19360473-19369888:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001403808594	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81548	1	7594	7594		20.482	1.1219	1	6323600	+		48426	26666	32561	32574	54696	54696					0.14627262273381803
RKLIRFRFLR	10	Unmodified	_RKLIRFRFLR_					0	0	0		ENST00000397086.6_2_16:2303455-2303809:-|nuORF	ENST00000397086.6_2_16:2303455-2303809:-|nuORF	ENST00000397086.6_2_16:2303455-2303809:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.97100830078125	3	468.973607	1403.89899	-1.6686	-0.00078252	-3.8782	-0.0018188	-5.5468	-0.0026013	468.9716486739128	48.981	2.0478	48.981	48.288	50.336	0					141	48	4	0	0	0	0.89421	1	3849	3849		10.104	3.783	1	552830			48427	11137	32562	32575	54697	54697					0.21319805386883672
RKLKKSSN	8	Unmodified	_RKLKKSSN_					0	0	0			REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|97|2|sense	REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|97|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8011779785156	2	480.801083	959.587613	-1.6775	-0.00080655	1.1222	0.00053954	-0.55533	-0.00026701	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.82658	1	9795	9795		21.96	1.013	1	17379000	+		48428	29486	32563	32576	54698	54698					0.10620271291327299
RKLKQLKFEPG	11	Unmodified	_RKLKQLKFEPG_					0	0	0			REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6090087890625	3	448.610111	1342.8085	-1.3368	-0.0005997	-0.31575	-0.00014165	-1.6525	-0.00074135	448.60975879741926	77.285	1.2875	77.285	77.023	78.311	0					128	61	3	0	0	0	0.74405	2	7079	7069;7079		23.378	4.1152	1	598490	+		48429	16827	32564	32577	54699;54700	54700					0.15081291547926412
RKLKQLKFEPG	11	Unmodified	_RKLKQLKFEPG_					0	0	0			REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.6108703613281	3	448.610111	1342.8085	-0.14494	-6.5021E-05	-1.758	-0.00078864	-1.9029	-0.00085366	448.9437169224278	77.071	0.84238	77.124	76.655	77.498	0.052704					75	41	2	0	0	0	0.71803	1	7472	7472		28.577	8.2617	1	780830	+		48430	16827	32564	32577	54701	54701					0.15081291547926412
RKLKQLKFEPG	11	Unmodified	_RKLKQLKFEPG_					0	0	0			REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.9436950683594	3	448.610111	1342.8085	-0.12449	-5.5849E-05	-1.5935	-0.00071488	-1.718	-0.00077073	448.94365307156517	77.124	0.95989	77.076	76.709	77.669	-0.048264					104	45	3	0	0	0	0.76579	2	7645	7645;7663		18.531	0.69791	1	533170	+		48431	16827	32564	32577	54702;54703	54702					0.15081291547926412
RKLKQLKFEPG	11	Unmodified	_RKLKQLKFEPG_					0	0	0			REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.60888671875	3	448.610111	1342.8085	-1.309	-0.00058724	-0.26888	-0.00012062	-1.5779	-0.00070786	448.60976401690687	76.777	1.1377	76.902	76.414	77.552	0.12485					110	49	3	0	0	0	0.74022	2	7177	7177;7200		24.232	3.3947	1	879130	+		48432	16827	32564	32577	54704;54705	54704					0.15081291547926412
RKLKQLKFEPG	11	Unmodified	_RKLKQLKFEPG_					0	0	0			REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.609130859375	3	448.610111	1342.8085	0.51937	0.00023299	-2.1838	-0.00097969	-1.6645	-0.0007467	448.6089579752084	75.063	1.1228	75.195	74.637	75.76	0.13208					79	31	3	0	0	0	0.77511	1	6968	6968		16.53	3.5724	1	398900	+		48433	16827	32564	32577	54706	54706					0.15081291547926412
RKLKQLKFEPG	11	Unmodified	_RKLKQLKFEPG_					0	0	0			REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.6097412109375	3	448.610111	1342.8085	0.53519	0.00024009	-2.1435	-0.00096159	-1.6083	-0.0007215	448.6089733377508	76.693	0.99095	76.828	76.468	77.459	0.13478					122	48	3	0	0	0	0.74405	3	7204	7172;7204;7219		23.378	3.3474	1	670390	+		48434	16827	32564	32577	54707;54708;54709	54708					0.15081291547926412
RKLKQLKFEPG	11	Unmodified	_RKLKQLKFEPG_					0	0	0			REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.6089172363281	3	448.610111	1342.8085	-1.3856	-0.00062161	-0.42513	-0.00019072	-1.8108	-0.00081233	448.609746420413	76.801	0.97182	76.89	76.464	77.435	0.089363					88	45	3	0	0	0	0.76251	3	7175	7150;7159;7175		19.263	5.1767	1	651130	+		48435	16827	32564	32577	54710;54711;54712	54712					0.15081291547926412
RKLKTGGN	8	Unmodified	_RKLKTGGN_					0	0	0		ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2648620605469	2	437.266876	872.519199	0.46111	0.00020163	-3.2258	-0.0014106	-2.7647	-0.0012089	437.2654513325837	23.967	1.9466	23.969	23.291	25.237	0.0018959					213	95	5	0	0	0	0.86677	1	745	745		27.882	2.4321	1	2561300			48436	1797	32565	32578	54713	54713					0.07784026711476599
RKLKTIPNIPM	11	Unmodified	_RKLKTIPNIPM_					0	0	0		ENSG00000127083|ENST00000375550|OMD	ENSG00000127083|ENST00000375550|OMD	ENSG00000127083|ENST00000375550|OMD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.6029357910156	3	437.60408	1309.79041	0.93747	0.00041024	0.12623	5.5239E-05	1.0637	0.00046548	437.60413783215915	15.683	0.47148	15.761	15.549	16.02	0.077959					33	20	2	0	0	0	0.73621	1	47	47		25.126	6.5949	1	53717			48437	3482	32566	32579	54714	54714					0.14790833301572093
RKLLALGV	8	Unmodified	_RKLLALGV_					0	0	0			REV__nc|ENSG00000087269|P78316-2|NOP14	REV__nc|ENSG00000087269|P78316-2|NOP14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3000183105469	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.86791	1	7296	7296		28.254	2.8041	1	881780	+		48438	16930	32567	32580	54715	54715					0.14627262273359065
RKLLALGV	8	Unmodified	_RKLLALGV_					0	0	0			REV__nc|ENSG00000087269|P78316-2|NOP14	REV__nc|ENSG00000087269|P78316-2|NOP14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.29974365234375	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81724	1	7131	7131		14.664	0	1	1921500	+		48439	16930	32567	32580	54716	54716					0.14627262273359065
RKLLALGV	8	Unmodified	_RKLLALGV_					0	0	0			REV__nc|ENSG00000087269|P78316-2|NOP14	REV__nc|ENSG00000087269|P78316-2|NOP14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2998352050781	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.83466	2	6840	6794;6840		29.842	0	1	1852500	+		48440	16930	32567	32580	54717;54718	54718					0.14627262273359065
RKLLALGV	8	Unmodified	_RKLLALGV_					0	0	0			REV__nc|ENSG00000087269|P78316-2|NOP14	REV__nc|ENSG00000087269|P78316-2|NOP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3002624511719	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.80963	2	8413	8137;8413		15.636	0	1	6323600	+		48441	16930	32567	32580	54719;54720	54720					0.14627262273359065
RKLLANRKLSA	11	Unmodified	_RKLLANRKLSA_					0	0	0			REV__ENST00000349314.6_1_22:36541572-36556848:-|nuORF	REV__ENST00000349314.6_1_22:36541572-36556848:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8927612304688	2	635.409321	1268.80409	1.504	0.00095567	-0.69021	-0.00043857	0.81382	0.00051711	635.4085378442235	105.48	0.18611	105.64	105.47	105.66	0.15924					7	4	2	0	0	0	0.17385	1	11226	11226		25.574	0	1	382400	+		48442	25332	32568	32581	54721	54721					0.18043827125029566
RKLLANRKLSA	11	Unmodified	_RKLLANRKLSA_					0	0	0			REV__ENST00000349314.6_1_22:36541572-36556848:-|nuORF	REV__ENST00000349314.6_1_22:36541572-36556848:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8927001953125	2	635.409321	1268.80409	0.93459	0.00059384	2.5498	0.0016202	3.4844	0.002214	635.4098730819109	105.22	0.15667	105.32	105.23	105.39	0.10765					7	3	3	0	0	0	0.1728	1	11201	11201		31.53	11.533	1	146080	+		48443	25332	32568	32581	54722	54722					0.18043827125029566
RKLLKLQLQN	10	Unmodified	_RKLLKLQLQN_					0	0	0		nc|ENSG00000149636|Q9H410-3|DSN1;nc|ENSG00000149636|Q9H410-2|DSN1;nc|ENSG00000149636|Q9H410-4|DSN1;ENSG00000149636|ENST00000373750|DSN1	nc|ENSG00000149636|Q9H410-3|DSN1	nc|ENSG00000149636|Q9H410-3|DSN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.60345458984375	3	418.60659	1252.79794	-1.86	-0.00077861	-2.6426	-0.0011062	-4.5026	-0.0018848	418.60539862838016	50.396	1.4893	50.426	49.452	50.941	0.029629					67	42	2	0	0	0	0.86551	1	3953	3953		14.694	0	1	136920			48444	5041	32569	32582	54723	54723					0.18165308893526344
RKLLLFKTF	9	Unmodified	_RKLLLFKTF_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	583.3765258789062	2	583.376426	1164.7383	0.63475	0.0003703	0.35856	0.00020917	0.99331	0.00057947	583.376388327019	44.912	1.522	44.924	44.229	45.751	0.012058					108	36	4	0	0	0	0.43338	1	3199	3199		55.504	14.932	1	1529200			48445	8635	32570	32583	54724	54724					0.16252037950107479
RKLLLFKTF	9	Unmodified	_RKLLLFKTF_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	583.376953125	2	583.376426	1164.7383	0.18608	0.00010855	0.83925	0.0004896	1.0253	0.00059815	583.3765821004686	44.9	1.8417	44.832	44.033	45.874	-0.068634					126	45	4	0	0	0	0.74721	1	3190	3190		37.159	2.9866	1	959060			48446	8635	32570	32583	54725	54725					0.16252037950107479
RKLLLFKTF	9	Unmodified	_RKLLLFKTF_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.37109375	2	583.376426	1164.7383	-2.1463	-0.0012521	1.2498	0.00072913	-0.89647	-0.00052298	583.3769989741414	43.059	2.3047	43.833	43.416	45.72	0.7738					144	56	4	0	0	0	0.7932	2	3909	3902;3909		23.042	3.0457	1	7573300			48447	8635	32570	32583	54726;54727	54727					0.16252037950107479
RKLLLFKTF	9	Unmodified	_RKLLLFKTF_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	583.376426	1164.7383	-1.1247	-0.00065615	2.2158	0.0012926	1.091	0.00063648	583.3772684677696	45.203	2.2598	45.203	43.938	46.198	0	0.1164	0.0012376	NaN	55.504	137	55	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	454220			48448	8635	32570	32583							0.16252037950107479
RKLLLFKTF	9	Unmodified	_RKLLLFKTF_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	583.376426	1164.7383	-0.51692	-0.00030156	1.4797	0.0008632	0.96274	0.00056164	583.3770086560302	45.574	1.7377	45.555	44.573	46.311	-0.018585	0.46868	0.0003787	NaN	55.504	96	40	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	881210			48449	8635	32570	32583							0.16252037950107479
RKLLLFKTF	9	Unmodified	_RKLLLFKTF_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	583.376426	1164.7383	-1.1894	-0.00069389	1.75	0.0010209	0.56058	0.00032703	583.3771702968781	45.008	2.1187	45.004	44.165	46.284	-0.0041618	-0.0822	0.00069414	NaN	55.504	113	49	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1120500			48450	8635	32570	32583							0.16252037950107479
RKLLLFKTF	9	Unmodified	_RKLLLFKTF_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	583.376426	1164.7383	0.38125	0.00022241	0.65762	0.00038364	1.0389	0.00060606	583.3764878089725	44.956	1.689	45.005	44.133	45.822	0.048996	-0.081641	-0.00058041	NaN	55.504	113	41	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	735740			48451	8635	32570	32583							0.16252037950107479
RKLLLQLP	8	Unmodified	_RKLLLQLP_					0	0	0			REV__nc|ENSG00000188487|Q1MX18-4|INSC	REV__nc|ENSG00000188487|Q1MX18-4|INSC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7952880859375	2	490.834394	979.654236	-1.4231	-0.00069849	-0.19098	-9.3738E-05	-1.614	-0.00079222	490.83403522668897	44.191	0.40186	45.035	44.82	45.222	0.84438					14	9	2	0	0	0	0.4196	1	4083	4083		3.41	3.41	1	196330	+		48452	23004	32571	32584	54728	54728					0.16359506853234507
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7959289550781	2	491.796955	981.579357	-1.5463	-0.00076044	-0.86884	-0.00042729	-2.4151	-0.0011877	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.7932	1	3930	3930		18.324	0	1	1240000			48453	444	32572	32585	54729	54729					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958984375	2	491.796955	981.579357	-1.4864	-0.00073099	-0.75568	-0.00037164	-2.2421	-0.0011026	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.5393	7	4390	4364;4390;4402;4410;4428;4449;4456		50.025	14.824	1	781720			48454	444	32572	32585	54730;54731;54732;54733;54734;54735;54736	54731					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7959289550781	2	491.796955	981.579357	0.019467	9.5736E-06	-2.2906	-0.0011265	-2.2711	-0.0011169	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.7932	1	4418	4418		25.45	0	1	310050			48455	444	32572	32585	54737	54737					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7954406738281	2	491.796955	981.579357	-0.0088364	-4.3457E-06	-2.3736	-0.0011673	-2.3824	-0.0011717	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.7932	1	4766	4766		25.45	6.0902	1	782460			48456	444	32572	32585	54738	54738					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.796142578125	2	491.796955	981.579357	-0.75953	-0.00037354	-1.8549	-0.00091221	-2.6144	-0.0012857	491.7959244094971	46.601	1.9125	46.572	45.843	47.756	-0.028782					158	52	4	0	0	0	0.7932	1	3955	3955		24.203	2.2429	1	3015000			48457	444	32572	32585	54739	54739					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7959289550781	2	491.796955	981.579357	-0.62954	-0.00030961	-1.6715	-0.00082202	-2.301	-0.0011316	491.79606037186466	51.204	1.5616	51.18	50.34	51.902	-0.02343					100	43	3	0	0	0	0.7932	1	4480	4480		25.45	0	1	394140			48458	444	32572	32585	54740	54740					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7956848144531	2	491.796955	981.579357	-0.58221	-0.00028633	-1.8427	-0.00090624	-2.4249	-0.0011926	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.76996	3	4696	4696;4728;4864		33.516	6.0902	1	792830			48459	444	32572	32585	54741;54742;54743	54741					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7955627441406	2	491.796955	981.579357	-1.8635	-0.00091647	-0.58818	-0.00028927	-2.4517	-0.0012057	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.7932	1	4625	4625		26.796	1.3459	1	703950			48460	444	32572	32585	54744	54744					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7972412109375	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.741	1	56.775	56.275	57.275	0.033184								0	0	0	0.31472	1	5133	5133		25.45	1.2474	1				48461	444	32572	32585	54745	54745					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.795654296875	2	491.796955	981.579357	-0.70573	-0.00034708	-1.8748	-0.00092201	-2.5805	-0.0012691	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.7932	1	4439	4439		26.796	7.4361	1	772710			48462	444	32572	32585	54746	54746					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7970886230469	2	491.796955	981.579357	-0.70147	-0.00034498	-1.5541	-0.0007643	-2.2556	-0.0011093	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.7932	1	4549	4549		18.324	0	1	1759500			48463	444	32572	32585	54747	54747					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956848144531	2	491.796955	981.579357	0.30701	0.00015099	-2.816	-0.0013849	-2.509	-0.0012339	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.77546	1	3478	3478		31.955	3.7006	1	3201400			48464	444	32572	32585	54748	54748					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7961730957031	2	491.796955	981.579357	0.36727	0.00018062	-2.9598	-0.0014556	-2.5925	-0.001275	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.67235	4	4419	4282;4312;4419;4442		42.474	11.971	1	748320			48465	444	32572	32585	54749;54750;54751;54752	54751					0.08783001050346684
RKLLMGAPP	9	Unmodified	_RKLLMGAPP_					0	0	0		chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	chr5:141494865-141510947|15|15.8|0.2|6.32|+|0|PCDHGC5,PCDHGC5|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79376220703125	2	491.796955	981.579357	-0.41148	-0.00020237	-2.1054	-0.0010354	-2.5169	-0.0012378	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.7932	1	4489	4489		25.45	1.2474	1	887820			48466	444	32572	32585	54753	54753					0.08783001050346684
RKLLPHKI	8	Unmodified	_RKLLPHKI_					0	0	0			REV__nc|ENSG00000172349|Q14005-2|IL16	REV__nc|ENSG00000172349|Q14005-2|IL16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	502.81390380859375	2	502.840011	1003.66547	0.77296	0.00038868	2.3715	0.0011925	3.1444	0.0015811	502.8414793836125	97.076	0.576	97.239	97.052	97.628	0.16316					20	13	2	0	0	0	0.4196	1	10063	10063		8.2313	0	1	100160	+		48467	21823	32573	32586	54754	54754					0.16378328947359932
RKLLWAPRR	9	Unmodified	_RKLLWAPRR_					0	0	0			REV__ENST00000420616.6_1_12:7342542-7342761:+|nuORF	REV__ENST00000420616.6_1_12:7342542-7342761:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.3800659179688	2	598.380366	1194.74618	-2.4045	-0.0014388	4.146	0.0024809	1.7415	0.001042	598.3827122218626	40.848	1.3552	40.855	40.235	41.59	0.0065727					86	35	3	0	0	0	0.78058	1	2974	2974		30.504	1.3541	1	583190	+		48468	26489	32574	32587	54755	54755					0.15659609990257195
RKLLWAPRR	9	Unmodified	_RKLLWAPRR_					0	0	0			REV__ENST00000420616.6_1_12:7342542-7342761:+|nuORF	REV__ENST00000420616.6_1_12:7342542-7342761:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3800048828125	2	598.380366	1194.74618	-1.5819	-0.00094655	2.7876	0.0016681	1.2058	0.00072151	598.381910376305	40.152	1.105	40.741	40.044	41.149	0.58915					94	27	5	0	0	0	0.7932	1	3380	3380		21.96	0.27414	1	9102300	+		48469	26489	32574	32587	54756	54756					0.15659609990257195
RKLLWAPRR	9	Unmodified	_RKLLWAPRR_					0	0	0			REV__ENST00000420616.6_1_12:7342542-7342761:+|nuORF	REV__ENST00000420616.6_1_12:7342542-7342761:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.383056640625	2	598.380366	1194.74618	-1.7641	-0.0010556	3.493	0.0020902	1.7289	0.0010345	598.3824318861281	41.194	0.78385	41.828	41.496	42.28	0.6339					56	21	3	0	0	0	0.78536	2	3634	3634;3647		29.15	6.1071	1	4475400	+		48470	26489	32574	32587	54757;54758	54757					0.15659609990257195
RKLMVEPL	8	Unmodified	_RKLMVEPL_					0	0	0		ENSG00000108094|ENST00000374749|CUL2;nc|ENSG00000108094|Q13617-2|CUL2	ENSG00000108094|ENST00000374749|CUL2	ENSG00000108094|ENST00000374749|CUL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.29901123046875	2	493.296788	984.579022	0.15762	7.7751E-05	3.9589	0.0019529	4.1165	0.0020307	493.2984788281329	16.5	0.53093	15.901	15.74	16.271	-0.59873					21	11	4	0	0	0	0.9295	1	135	135		55.504	0.78186	1	687420			48471	2393	32575	32588	54759	54759					0.08611581330478657
RKLPGPRPVFS	11	Unmodified	_RKLPGPRPVFS_					0	0	0			REV__ENSG00000158553|ENST00000444565|POM121L2	REV__ENSG00000158553|ENST00000444565|POM121L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.385009765625	2	627.377489	1252.74043	6.5824	0.0041297	0.80567	0.00050546	7.3881	0.0046351	627.3778931643454	110.88	0.7373	110.93	110.56	111.3	0.049095					56	30	2	0	0	0	0.69995	1	13445	13445		31.53	7.0106	1	362180	+		48472	20612	32576	32589	54760	54760					0.1241646668793237
RKLPILLAR	9	Unmodified	_RKLPILLAR_					0	0	0		ENST00000373685.1_1_6:36853700-36860566:+|nuORF;ENST00000480824.6_1_6:36853700-36862364:+|nuORF	ENST00000373685.1_1_6:36853700-36860566:+|nuORF	ENST00000373685.1_1_6:36853700-36860566:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.3765258789062	2	540.374218	1078.73388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.65	1	116.57	116.07	117.07	-0.074318								0	0	0	0.36148	1	12528	12528		11.511	4.3177	1				48473	10753	32577	32590	54761	54761					0.19766573527226683
RKLQAHVLLIK	11	Unmodified	_RKLQAHVLLIK_					0	0	0		nc|ENSG00000183569|Q9H4I8-3|SERHL2;nc|ENSG00000183569|Q9H4I8-2|SERHL2;ENST00000534080.5_1_22:42950026-42967210:+|nuORF;ENSG00000183569|ENST00000327678|SERHL2;ENST00000477564.5_1_22:42956217-42967210:+|nuORF;ENST00000527167.5_1_22:42967159-42969648:+|nuORF	nc|ENSG00000183569|Q9H4I8-3|SERHL2	nc|ENSG00000183569|Q9H4I8-3|SERHL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.6269226074219	3	440.294235	1317.86087	-1.6142	-0.00071074	-2.0665	-0.00090985	-3.6807	-0.0016206	440.2929975930263	58.275	1.2356	58.275	57.838	59.074	0					156	53	4	0	0	0	0.79716	1	5035	5035		11.932	0	1	193800			48474	7540	32578	32591	54762	54762					0.21465874681553032
RKLQAHVLLIK	11	Unmodified	_RKLQAHVLLIK_					0	0	0		nc|ENSG00000183569|Q9H4I8-3|SERHL2;nc|ENSG00000183569|Q9H4I8-2|SERHL2;ENST00000534080.5_1_22:42950026-42967210:+|nuORF;ENSG00000183569|ENST00000327678|SERHL2;ENST00000477564.5_1_22:42956217-42967210:+|nuORF;ENST00000527167.5_1_22:42967159-42969648:+|nuORF	nc|ENSG00000183569|Q9H4I8-3|SERHL2	nc|ENSG00000183569|Q9H4I8-3|SERHL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.625732421875	3	440.294235	1317.86087	0.12493	5.5008E-05	-4.4297	-0.0019504	-4.3048	-0.0018954	440.29209490830686	59.759	1.3614	59.791	59.261	60.623	0.032825					81	34	3	0	0	0	0.7896	1	5509	5509		13.508	2.4112	1	212730			48475	7540	32578	32591	54763	54763					0.21465874681553032
RKLQAHVLLIK	11	Unmodified	_RKLQAHVLLIK_					0	0	0		nc|ENSG00000183569|Q9H4I8-3|SERHL2;nc|ENSG00000183569|Q9H4I8-2|SERHL2;ENST00000534080.5_1_22:42950026-42967210:+|nuORF;ENSG00000183569|ENST00000327678|SERHL2;ENST00000477564.5_1_22:42956217-42967210:+|nuORF;ENST00000527167.5_1_22:42967159-42969648:+|nuORF	nc|ENSG00000183569|Q9H4I8-3|SERHL2	nc|ENSG00000183569|Q9H4I8-3|SERHL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2918701171875	3	440.294235	1317.86087	-1.5024	-0.00066148	-2.8775	-0.0012669	-4.3799	-0.0019284	440.2927341441064	57.947	0.93653	58.027	57.61	58.546	0.079643					126	42	4	0	0	0	0.79224	1	4922	4922		12.957	0	1	432770			48476	7540	32578	32591	54764	54764					0.21465874681553032
RKLQAHVLLIK	11	Unmodified	_RKLQAHVLLIK_					0	0	0		nc|ENSG00000183569|Q9H4I8-3|SERHL2;nc|ENSG00000183569|Q9H4I8-2|SERHL2;ENST00000534080.5_1_22:42950026-42967210:+|nuORF;ENSG00000183569|ENST00000327678|SERHL2;ENST00000477564.5_1_22:42956217-42967210:+|nuORF;ENST00000527167.5_1_22:42967159-42969648:+|nuORF	nc|ENSG00000183569|Q9H4I8-3|SERHL2	nc|ENSG00000183569|Q9H4I8-3|SERHL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.29254150390625	3	440.294235	1317.86087	-0.80693	-0.00035529	-3.543	-0.00156	-4.3499	-0.0019153	440.2925892319023	59.813	1.0781	59.814	59.336	60.414	0.00051117					87	33	3	0	0	0	0.74405	2	5164	5139;5164		23.378	9.87	1	264470			48477	7540	32578	32591	54765;54766	54766					0.21465874681553032
RKLQKSTH	8	Unmodified	_RKLQKSTH_					0	0	0		ENST00000472719.5_1_2:27008929-27016144:+|nuORF;ENSG00000115163|ENST00000335756|CENPA;nc|ENSG00000115163|P49450-2|CENPA;ENST00000475662.5_1_2:26987167-27016144:+|nuORF	ENST00000472719.5_1_2:27008929-27016144:+|nuORF	ENST00000472719.5_1_2:27008929-27016144:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.2978515625	2	499.298707	996.582862	-1.3389	-0.00066851	1.5845	0.00079115	0.24562	0.00012264	499.29910871767044	28.871	1.101	28.842	28.328	29.429	-0.029209					49	25	3	0	0	0	0.90983	1	1775	1775		42.396	8.2236	1	163610			48478	2815	32579	32592	54767	54767					0.08443387148565762
RKLQKSTH	8	Unmodified	_RKLQKSTH_					0	0	0		ENST00000472719.5_1_2:27008929-27016144:+|nuORF;ENSG00000115163|ENST00000335756|CENPA;nc|ENSG00000115163|P49450-2|CENPA;ENST00000475662.5_1_2:26987167-27016144:+|nuORF	ENST00000472719.5_1_2:27008929-27016144:+|nuORF	ENST00000472719.5_1_2:27008929-27016144:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	499.298707	996.582862	0.69633	0.00034768	-0.91759	-0.00045815	-0.22125	-0.00011047	499.29815809956716	29.047	1.0694	28.874	28.294	29.363	-0.17336	0.015702	-0.00077218	NaN	42.396	43	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165060			48479	2815	32579	32592							0.08443387148565762
RKLRAATG	8	Unmodified	_RKLRAATG_					0	0	0		ENSG00000129467|ENST00000418030|ADCY4;ENST00000545213.5_1_14:24798022-24799232:-|nuORF;ENST00000557056.5_1_14:24792528-24800258:-|nuORF;nc|ENSG00000129467|Q8NFM4-2|ADCY4	ENSG00000129467|ENST00000418030|ADCY4	ENSG00000129467|ENST00000418030|ADCY4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.77362060546875	2	436.774868	871.535184	-0.76279	-0.00033317	-2.0845	-0.00091048	-2.8473	-0.0012436	436.773961366412	27.779	2.36	27.682	26.915	29.275	-0.096947					107	54	4	0	0	0	0.80308	1	1570	1570		16.473	1.809	1	1192900			48480	3589	32580	32593	54768	54768					0.09427732948370249
RKLRGKRRPVI	11	Unmodified	_RKLRGKRRPVI_					0	0	0		ENST00000434206.1_1_3:43020805-43095327:+|nuORF;ENSG00000144649|ENST00000430121|GASK1A	ENST00000434206.1_1_3:43020805-43095327:+|nuORF	ENST00000434206.1_1_3:43020805-43095327:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.30633544921875	3	460.312511	1377.9157	-2.4094	-0.0011091	-2.7841	-0.0012816	-5.1935	-0.0023906	460.31115668533715	40.471	1.1873	40.863	40.05	41.237	0.39209					73	31	3	0	0	0	0.76579	4	3459	3434;3446;3459;3472		18.531	7.0764	1	7212400			48481	4724	32581	32594	54769;54770;54771;54772	54771					0.2418630627280436
RKLRGKRRPVI	11	Unmodified	_RKLRGKRRPVI_					0	0	0		ENST00000434206.1_1_3:43020805-43095327:+|nuORF;ENSG00000144649|ENST00000430121|GASK1A	ENST00000434206.1_1_3:43020805-43095327:+|nuORF	ENST00000434206.1_1_3:43020805-43095327:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.31365966796875	3	460.312511	1377.9157	-1.5682	-0.00072186	-3.2717	-0.001506	-4.8399	-0.0022279	460.3109022015977	40.379	0.79731	40.968	40.515	41.312	0.58915					59	21	3	0	0	0	0.78683	1	3476	3476		14.086	5.2867	1	6461400			48482	4724	32581	32594	54773	54773					0.2418630627280436
RKLRGKRRPVI	11	Unmodified	_RKLRGKRRPVI_					0	0	0		ENST00000434206.1_1_3:43020805-43095327:+|nuORF;ENSG00000144649|ENST00000430121|GASK1A	ENST00000434206.1_1_3:43020805-43095327:+|nuORF	ENST00000434206.1_1_3:43020805-43095327:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	460.312511	1377.9157	-1.1967	-0.00055086	-2.1888	-0.0010075	-3.3855	-0.0015584	460.3111848150804	40.729	0.14588	40.734	40.607	40.753	0.0043983	-0.12134	0.00097767	NaN	18.531	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	192530			48483	4724	32581	32594							0.2418630627280436
RKLRLITFNR	10	Unmodified	_RKLRLITFNR_					0	0	0		ENSG00000157224|ENST00000496677|CLDN12	ENSG00000157224|ENST00000496677|CLDN12	ENSG00000157224|ENST00000496677|CLDN12	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.6125793457031	3	439.613967	1315.82007	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.358	1	58.75	58.25	59.25	0.39209								0	0	0	0.45132	1	6107	6107		20.837	0	1				48484	5417	32582	32595	54774	54774					0.17479533361915855
RKLRLLRSLD	10	Unmodified	_RKLRLLRSLD_					0	0	0		ENSG00000174348|ENST00000312553|PODN;nc|ENSG00000174348|Q7Z5L7-2|PODN;nc|ENSG00000174348|Q7Z5L7-3|PODN;nc|ENSG00000174348|Q7Z5L7-4|PODN	ENSG00000174348|ENST00000312553|PODN	ENSG00000174348|ENST00000312553|PODN	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	635.4077758789062	2	635.409321	1268.80409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.819	1	15.819	15.319	16.319	0								0	0	0	0.45132	1	68	68		25.574	1.0549	1				48485	6926	32583	32596	54775	54775					0.18043827125006828
RKLRPISKLE	10	Unmodified	_RKLRPISKLE_					0	0	0			REV__ENSG00000182791|ENST00000333861|CCDC87	REV__ENSG00000182791|ENST00000333861|CCDC87	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.9322204589844	3	413.934706	1238.78229	-1.0065	-0.00041663	-3.7709	-0.0015609	-4.7774	-0.0019775	413.93306098265026	44.954	2.5911	44.923	43.876	46.467	-0.031067					192	60	4	0	0	0	0.85259	1	3546	3546		20.03	0.7678	1	748080	+		48486	22551	32584	32597	54776	54776					0.1724502237643719
RKLRRRALKIQ	11	Unmodified	_RKLRRRALKIQ_					0	0	0			REV__nc|ENSG00000165626|Q8N7W2-2|BEND7	REV__nc|ENSG00000165626|Q8N7W2-2|BEND7	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.9927673339844	3	479.991549	1436.95282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.675	1	15.733	15.233	16.233	0.057872								0	0	0	0.56276	1	61	61		9.2118	0	1		+		48487	21197	32585	32598	54777	54777					0.2518197781857907
RKLRRRALKIQ	11	Unmodified	_RKLRRRALKIQ_					0	0	0			REV__nc|ENSG00000165626|Q8N7W2-2|BEND7	REV__nc|ENSG00000165626|Q8N7W2-2|BEND7	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.9921569824219	3	479.991549	1436.95282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.585	1	15.561	15.061	16.061	-0.024207								0	0	0	0.56276	1	52	52		13.508	0.55046	1		+		48488	21197	32585	32598	54778	54778					0.2518197781857907
RKLRVHNEI	9	Unmodified	_RKLRVHNEI_					0	0	0			REV__ENST00000359358.8_1_18:30253844-30254171:-|nuORF	REV__ENST00000359358.8_1_18:30253844-30254171:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8551635742188	2	582.851638	1163.68872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.1	1	119.08	118.58	119.58	-0.024033								0	0	0	0.34348	1	13197	13197		16.473	0	1		+		48489	25459	32586	32599	54779	54779					0.11342722994027099
RKLSAHSA	8	Unmodified	_RKLSAHSA_					0	0	0		nc|ENSG00000173567|Q8IZF5-2|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2524108886719	2	435.251226	868.487899	-1.3354	-0.00058123	1.6938	0.00073721	0.35838	0.00015599	435.2518916713919	77.486	2.837	77.486	75.833	78.67	0					195	121	3	0	0	0	0.89043	1	7119	7119		35.618	2.8059	1	487350			48490	6868	32587	32600	54780	54780					0.048394536773685104
RKLSAHSA	8	Unmodified	_RKLSAHSA_					0	0	0		nc|ENSG00000173567|Q8IZF5-2|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2523498535156	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.89494	2	7671	7671;7774		38.806	5.2906	1	1788100			48491	6868	32587	32600	54781;54782	54781					0.048394536773685104
RKLSAHSA	8	Unmodified	_RKLSAHSA_					0	0	0		nc|ENSG00000173567|Q8IZF5-2|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25335693359375	2	435.251226	868.487899	-0.16621	-7.2343E-05	0.40306	0.00017543	0.23685	0.00010309	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.8347	2	7392	7392;7405		30.504	0	1	768200			48492	6868	32587	32600	54783;54784	54783					0.048394536773685104
RKLSAHSA	8	Unmodified	_RKLSAHSA_					0	0	0		nc|ENSG00000173567|Q8IZF5-2|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25164794921875	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.89494	1	8088	8088		37.159	2.9866	1	2823900			48493	6868	32587	32600	54785	54785					0.048394536773685104
RKLSAHSA	8	Unmodified	_RKLSAHSA_					0	0	0		nc|ENSG00000173567|Q8IZF5-2|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2522888183594	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.89494	1	7612	7612		37.159	5.2042	1	3292300			48494	6868	32587	32600	54786	54786					0.048394536773685104
RKLSAHSA	8	Unmodified	_RKLSAHSA_					0	0	0		nc|ENSG00000173567|Q8IZF5-2|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25140380859375	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87479	2	7508	7508;8108		37.159	11.709	1	3370400			48495	6868	32587	32600	54787;54788	54787					0.048394536773685104
RKLSAHSA	8	Unmodified	_RKLSAHSA_					0	0	0		nc|ENSG00000173567|Q8IZF5-2|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2510986328125	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.89043	1	7224	7224		35.618	1.4457	1	712390			48496	6868	32587	32600	54789	54789					0.048394536773685104
RKLSAHSA	8	Unmodified	_RKLSAHSA_					0	0	0		nc|ENSG00000173567|Q8IZF5-2|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2518005371094	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.87064	1	7962	7962		29.15	4.9468	1	2743300			48497	6868	32587	32600	54790	54790					0.048394536773685104
RKLSAHSA	8	Unmodified	_RKLSAHSA_					0	0	0		nc|ENSG00000173567|Q8IZF5-2|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2520446777344	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87064	3	7355	7318;7355;7946		30.504	4.9468	1	2494100			48498	6868	32587	32600	54791;54792;54793	54792					0.048394536773685104
RKLSAHSA	8	Unmodified	_RKLSAHSA_					0	0	0		nc|ENSG00000173567|Q8IZF5-2|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	nc|ENSG00000173567|Q8IZF5-2|ADGRF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2523498535156	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.87479	1	9421	9421		30.504	6.3009	1	2235800			48499	6868	32587	32600	54794	54794					0.048394536773685104
RKLSARIKY	9	Unmodified	_RKLSARIKY_					0	0	0			REV__nc|ENSG00000164347|Q969S9-5|GFM2	REV__nc|ENSG00000164347|Q969S9-5|GFM2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3300170898438	2	567.858932	1133.70331	0.78993	0.00044857	-4.3591	-0.0024753	-3.5691	-0.0020268	567.8563067819179	92.035	0.21333	92.191	92.025	92.238	0.15614					6	4	2	0	0	0	0.20789	1	9283	9283		17.365	6.4994	1	48359	+		48500	21075	32588	32601	54795	54795					0.141807951421697
RKLSFFTK	8	Unmodified	_RKLSFFTK_					0	0	0			REV__ENSG00000196646|ENST00000343979|ZNF136	REV__ENSG00000196646|ENST00000343979|ZNF136	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8084716796875	2	513.808377	1025.6022	-1.3833	-0.00071076	2.6514	0.0013623	1.2681	0.00065157	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.87479	1	4338	4338		30.504	3.8107	1	1148600	+		48501	23156	32589	32602	54796	54796					0.0904234343945518
RKLSFFTK	8	Unmodified	_RKLSFFTK_					0	0	0			REV__ENSG00000196646|ENST00000343979|ZNF136	REV__ENSG00000196646|ENST00000343979|ZNF136	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8086547851562	2	513.808377	1025.6022	0.034734	1.7846E-05	1.2224	0.00062807	1.2571	0.00064592	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.86677	1	4476	4476		27.882	1.0861	1	666950	+		48502	23156	32589	32602	54797	54797					0.0904234343945518
RKLSFFTK	8	Unmodified	_RKLSFFTK_					0	0	0			REV__ENSG00000196646|ENST00000343979|ZNF136	REV__ENSG00000196646|ENST00000343979|ZNF136	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.808837890625	2	513.808377	1025.6022	-0.47161	-0.00024232	1.6041	0.00082419	1.1325	0.00058187	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.86677	1	4052	4052		27.882	3.6795	1	1552900	+		48503	23156	32589	32602	54798	54798					0.0904234343945518
RKLSFFTK	8	Unmodified	_RKLSFFTK_					0	0	0			REV__ENSG00000196646|ENST00000343979|ZNF136	REV__ENSG00000196646|ENST00000343979|ZNF136	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8084716796875	2	513.808377	1025.6022	-0.43911	-0.00022562	1.5531	0.00079801	1.114	0.00057239	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.89043	1	4215	4215		35.618	2.1027	1	1606900	+		48504	23156	32589	32602	54799	54799					0.0904234343945518
RKLSFFTK	8	Unmodified	_RKLSFFTK_					0	0	0			REV__ENSG00000196646|ENST00000343979|ZNF136	REV__ENSG00000196646|ENST00000343979|ZNF136	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8096923828125	2	513.808377	1025.6022	-0.26337	-0.00013532	1.4503	0.00074519	1.187	0.00060987	513.8089696081398	52.202	2.125	52.215	51.482	53.607	0.012436					136	54	4	0	0	0	0.84341	1	4586	4586		24.203	1.1603	1	732880	+		48505	23156	32589	32602	54800	54800					0.0904234343945518
RKLSHLGSK	9	Unmodified	_RKLSHLGSK_					0	0	0			REV__ENST00000471867.2_2_13:47349749-47349869:-|nuORF	REV__ENST00000471867.2_2_13:47349749-47349869:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.31640625	2	513.314358	1024.61416	0.3202	0.00016436	3.49	0.0017915	3.8102	0.0019558	513.3159908318282	43.284	1.4208	43.257	42.839	44.259	-0.026768					81	33	4	0	0	0	0.77244	2	3295	3295;3328		32.812	2.5316	1	394850	+		48506	27244	32590	32603	54801;54802	54801					0.10283960182664487
RKLSIRFRAY	10	Unmodified	_RKLSIRFRAY_					0	0	0		ENST00000292535.11_1_7:101747723-101758522:+|nuORF	ENST00000292535.11_1_7:101747723-101758522:+|nuORF	ENST00000292535.11_1_7:101747723-101758522:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2679443359375	3	437.266568	1308.77787	-0.68964	-0.00030156	3.497	0.0015291	2.8073	0.0012275	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.85259	1	4762	4762		20.03	5.7872	1	2651700			48507	9689	32591	32604	54803	54803					0.13583557953552372
RKLSKSLLKH	10	Unmodified	_RKLSKSLLKH_					0	0	0		nc|ENSG00000196353|Q96A23-2|CPNE4;ENSG00000196353|ENST00000429747|CPNE4	nc|ENSG00000196353|Q96A23-2|CPNE4	nc|ENSG00000196353|Q96A23-2|CPNE4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.929443359375	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.85004	1	3484	3484		17.167	1.2461	1	2526100			48508	8042	32592	32605	54804	54804					0.17569039722025082
RKLSLILLT	9	Unmodified	_RKLSLILLT_					0	0	0			REV__ENSG00000236398|ENST00000446620|TAS2R39	REV__ENSG00000236398|ENST00000446620|TAS2R39	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.3087768554688	2	528.860609	1055.70667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.31	1	115.3	114.8	115.8	-0.016441								0	0	0	0.36238	1	13881	13881		10.265	2.575	1		+		48509	23791	32593	32606	54805	54805					0.1810404519619624
RKLSRAPV	8	Unmodified	_RKLSRAPV_					0	0	0		nc|ENSG00000170379|A6NFQ2-3|TCAF2;ENSG00000283528|ENST00000636941|TCAF2C;nc|ENSG00000170379|A6NFQ2-2|TCAF2;ENSG00000170379|ENST00000684770|TCAF2	nc|ENSG00000170379|A6NFQ2-3|TCAF2	nc|ENSG00000170379|A6NFQ2-3|TCAF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.7998962402344	2	463.798343	925.582134	0.28206	0.00013082	4.2188	0.0019567	4.5009	0.0020875	463.8001612881591	41.523	1.5134	41.492	41.236	42.75	-0.030991					87	37	3	0	0	0	0.89043	1	3031	3031		35.618	2.1027	1	527400			48510	15088	32594	32607	54806	54806					0.1163659249950797
RKLSRRLWP	9	Unmodified	_RKLSRRLWP_					0	0	0		ENST00000381496.7_1_10:468766-532425:-|nuORF	ENST00000381496.7_1_10:468766-532425:-|nuORF	ENST00000381496.7_1_10:468766-532425:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5900573730469	3	404.587641	1210.74109	1.2344	0.00049943	1.5544	0.00062891	2.7889	0.0011283	404.5881712722995	41.372	1.4334	41.378	40.604	42.037	0.0065727					70	37	2	0	0	0	0.7932	1	2982	2982		24.519	1.1413	1	244970			48511	10958	32595	32608	54807	54807					0.14415306127648364
RKLVDREGLIP	11	Unmodified	_RKLVDREGLIP_					0	0	0		nc|ENSG00000117425|Q9Y6C5-2|PTCH2;ENSG00000117425|ENST00000372192|PTCH2	nc|ENSG00000117425|Q9Y6C5-2|PTCH2	nc|ENSG00000117425|Q9Y6C5-2|PTCH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3924560546875	2	648.393336	1294.77212	2.6473	0.0017165	-3.3608	-0.0021791	-0.7135	-0.00046263	648.3910621231973	107.28	1.1649	107.25	106.75	107.91	-0.034134					106	27	4	0	0	0	0.7144	1	11816	11816		29.17	1.0886	1	42480000			48512	2978	32596	32609	54808	54808					0.13652414651232903
RKLVPQLVR	9	Unmodified	_RKLVPQLVR_					0	0	0		ENSG00000166747|ENST00000299980|AP1G1	ENSG00000166747|ENST00000299980|AP1G1	ENSG00000166747|ENST00000299980|AP1G1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.8699951171875	2	554.8693	1107.72405	-0.0075547	-4.1919E-06	0.17005	9.4357E-05	0.1625	9.0166E-05	554.8692814582408	20.007	0.64329	19.378	19.075	19.718	-0.62961					31	13	3	0	0	0	0.74721	1	618	618		37.159	1.5408	1	548660			48513	6226	32597	32610	54809	54809					0.17449385521831573
RKLVREYY	8	Unmodified	_RKLVREYY_					0	0	0			REV__nc|ENSG00000104381|Q8TB36-2|GDAP1	REV__nc|ENSG00000104381|Q8TB36-2|GDAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.8195190429688	2	563.822015	1125.62948	-0.38665	-0.000218	1.9455	0.0010969	1.5588	0.0008789	563.8228498879856	46.48	0.84751	47.403	47.11	47.958	0.92315					37	19	4	0	0	0	0.42407	1	4375	4375		79.451	31.491	1	4727600	+		48514	17455	32598	32611	54810	54810					0.0716882697984147
RKLWLRQRRPQ	11	Unmodified	_RKLWLRQRRPQ_					0	0	0			REV__nc|ENSG00000142405|P59046-5|NLRP12	REV__nc|ENSG00000142405|P59046-5|NLRP12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8077392578125	3	512.983054	1535.92733	-0.38571	-0.00019786	0.76794	0.00039394	0.38222	0.00019607	513.3172599219184	57.445	0.10404	57.525	57.44	57.544	0.079643					6	4	2	0	0	0	0.18258	1	4856	4856		8.7993	5.588	1	45297	+		48515	29900	32599	32612	54811	54811					0.18080503296164352
RKLYAKKELKK	11	Unmodified	_RKLYAKKELKK_					0	0	0			REV__ENSG00000111249|ENST00000261726|CUX2	REV__ENSG00000111249|ENST00000261726|CUX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.97076416015625	3	468.973161	1403.89765	-0.32674	-0.00015323	-4.1476	-0.0019451	-4.4744	-0.0020984	468.97108105597175	48.857	1.6348	48.764	48.126	49.761	-0.093178					121	39	4	0	0	0	0.79476	1	3752	3752		12.433	0	1	745890	+		48516	17854	32600	32613	54812	54812					0.21186126507450354
RKLYGTRRD	9	Unmodified	_RKLYGTRRD_					0	0	0			REV__chr1:145925927-145926482|13|20.15|0.35|5.86|-|0|RBM8A,RBM8A|1	REV__chr1:145925927-145926482|13|20.15|0.35|5.86|-|0|RBM8A,RBM8A|1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.8343505859375	2	582.833446	1163.65234	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.471	1	94.906	94.406	95.406	0.43539								0	0	0	0.31738	1	11318	11318		24.519	0	1		+		48517	15412	32601	32614	54813	54813					0.07705846097337599
RKLYVLKYL	9	Unmodified	_RKLYVLKYL_					0	0	0		ENST00000474873.5_1_10:100195027-100205113:-|nuORF;ENST00000467246.5_1_10:100191016-100205113:-|nuORF;nc|ENSG00000289758|Q92902-3|HPS1;nc|ENSG00000289758|Q92902-2|HPS1;ENSG00000107521|ENST00000361490|HPS1	ENST00000474873.5_1_10:100195027-100205113:-|nuORF	ENST00000474873.5_1_10:100195027-100205113:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.8843383789062	2	598.381709	1194.74886	-0.74115	-0.00044349	0.16298	9.7525E-05	-0.57817	-0.00034597	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.7932	1	3032	3032		21.96	0	1	772980			48518	2348	32602	32615	54814	54814					0.15928020604565063
RKMENLKK	8	Oxidation (M)	_RKM(Oxidation (M))ENLKK_		RKM(1)ENLKK		RKM(79)ENLKK	0	0	1		ENSG00000139132|ENST00000534526|FGD4;nc|ENSG00000139132|Q96M96-2|FGD4;ENST00000493087.5_1_12:32755237-32793464:+|nuORF;nc|ENSG00000139132|Q96M96|FGD4	ENSG00000139132|ENST00000534526|FGD4	ENSG00000139132|ENST00000534526|FGD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.806396484375	2	531.808051	1061.60155	0.79171	0.00042104	-4.1359	-0.0021995	-3.3442	-0.0017785	531.8057678754459	25.234	0.65381	24.905	24.658	25.312	-0.32825					23	14	2	0	0	0	0.42407	1	1286	1286		79.451	8.1553	1	459040			48519	4346	32603	32616	54815	54815		75			0.07321180728104082
RKMLTLHA	8	Unmodified	_RKMLTLHA_					0	0	0			REV__nc|ENSG00000163754|P46976-2|GYG1	REV__nc|ENSG00000163754|P46976-2|GYG1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.28594970703125	2	485.286754	968.558955	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.458	1	76.591	76.091	77.091	0.13325								0	0	0	0.30045	1	7156	7156		40.573	1.7665	1		+		48520	20966	32604	32617	54816	54816					0.07341830390532778
RKMMWKRLPLI	11	Unmodified	_RKMMWKRLPLI_					0	0	0		ENST00000543897.5_2_12:122973991-122975064:-|nuORF	ENST00000543897.5_2_12:122973991-122975064:-|nuORF	ENST00000543897.5_2_12:122973991-122975064:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2987060546875	3	491.296593	1470.86795	2.8436	0.001397	2.2637	0.0011121	5.1073	0.0025092	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.80593	1	13113	13113		10.104	0.8921	1	3274400			48521	13565	32605	32618	54817	54817					0.15135147966111617
RKMPDVQLM	9	2 Oxidation (M)	_RKM(Oxidation (M))PDVQLM(Oxidation (M))_		RKM(1)PDVQLM(1)		RKM(63)PDVQLM(63)	0	0	2			REV__ENSG00000132356|ENST00000397128|PRKAA1	REV__ENSG00000132356|ENST00000397128|PRKAA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.2947387695312	2	575.291376	1148.5682	-0.40049	-0.0002304	1.7784	0.0010231	1.378	0.00079272	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.31972	1	8678	8678		63.306	13.865	1	1396200	+		48522	18995	32606	32619	54818	54818		276;277			-0.00014189106104822713
RKMRLLGP	8	Unmodified	_RKMRLLGP_					0	0	0			REV__ENST00000497956.1_1_1:26152850-26152910:+|nuORF	REV__ENST00000497956.1_1_1:26152850-26152910:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2872314453125	2	485.802571	969.59059	-0.76304	-0.00037069	-4.195	-0.0020379	-4.958	-0.0024086	485.8004603855518	46.55	0.69697	47.021	46.735	47.432	0.47139					27	16	3	0	0	0	0.4196	1	4446	4446		50.025	12.865	1	1501100	+		48523	27125	32607	32620	54819	54819					0.10457823144486156
RKMRLVWRSYW	11	Unmodified	_RKMRLVWRSYW_					0	0	0		ENST00000536938.1_1_12:48543600-48543777:-|nuORF	ENST00000536938.1_1_12:48543600-48543777:-|nuORF	ENST00000536938.1_1_12:48543600-48543777:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	527.6427001953125	3	527.625879	1579.85581	0.10823	5.7106E-05	-2.1745	-0.0011473	-2.0663	-0.0010902	527.6250001594861	17.149	0.49668	17.211	16.993	17.49	0.062601					33	22	2	0	0	0	0.18331	1	208	208		3.026	0	1	72814			48524	13445	32608	32621	54820	54820					0.08907247547290353
RKMRLVWRSYW	11	Unmodified	_RKMRLVWRSYW_					0	0	0		ENST00000536938.1_1_12:48543600-48543777:-|nuORF	ENST00000536938.1_1_12:48543600-48543777:-|nuORF	ENST00000536938.1_1_12:48543600-48543777:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	527.625879	1579.85581	-0.23629	-0.00012467	-1.6595	-0.00087559	-1.8958	-0.0010003	527.9594799293411	17.209	0.38992	17.255	17.02	17.409	0.045702	0.044534	0.00083034	NaN	5.6988	36	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	117300			48525	13445	32608	32621							0.08907247547290353
RKMRLVWRSYW	11	Unmodified	_RKMRLVWRSYW_					0	0	0		ENST00000536938.1_1_12:48543600-48543777:-|nuORF	ENST00000536938.1_1_12:48543600-48543777:-|nuORF	ENST00000536938.1_1_12:48543600-48543777:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	527.625879	1579.85581	0.86016	0.00045384	-2.8559	-0.0015069	-1.9958	-0.001053	527.6242343284205	17.188	0.35915	17.164	16.982	17.341	-0.024035	-0.045844	-0.0010635	NaN	5.6988	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88997			48526	13445	32608	32621							0.08907247547290353
RKMRMPTV	8	Unmodified	_RKMRMPTV_					0	0	0		ENST00000302764.8_1_5:162880852-162880972:-|nuORF	ENST00000302764.8_1_5:162880852-162880972:-|nuORF	ENST00000302764.8_1_5:162880852-162880972:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7849426269531	2	509.786064	1017.55758	2.0655	0.0010529	-3.2815	-0.0016729	-1.216	-0.00061991	509.7839834358301	106.91	0.92004	107.01	106.61	107.53	0.10396					57	33	3	0	0	0	0.91977	1	13029	13029		45.952	3.4775	1	400230			48527	9824	32609	32622	54821	54821					0.04949873030125218
RKMVPATIH	9	Unmodified	_RKMVPATIH_					0	0	0			REV__ENST00000244043.4_1_20:48164381-48164465:-|nuORF	REV__ENST00000244043.4_1_20:48164381-48164465:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.8076171875	2	526.805311	1051.59607	3.1222	0.0016448	2.0164	0.0010623	5.1386	0.002707	526.8062549875466	101.13	2.204	101.08	100.09	102.29	-0.052116					131	51	4	0	0	0	0.47272	1	11052	11052		53.351	0.41475	1	2494300	+		48528	24244	32610	32623	54822	54822					0.07233501936298126
RKMVPATIH	9	Unmodified	_RKMVPATIH_					0	0	0			REV__ENST00000244043.4_1_20:48164381-48164465:-|nuORF	REV__ENST00000244043.4_1_20:48164381-48164465:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8081665039062	2	526.805311	1051.59607	2.0771	0.0010942	2.3488	0.0012374	4.4259	0.0023316	526.8065947880607	99.033	1.2732	99.395	98.525	99.798	0.36137					108	31	5	0	0	0	0.14115	1	11968	11968		85.359	0.44396	1	32054000	+		48529	24244	32610	32623	54823	54823					0.07233501936298126
RKMVPATIH	9	Unmodified	_RKMVPATIH_					0	0	0			REV__ENST00000244043.4_1_20:48164381-48164465:-|nuORF	REV__ENST00000244043.4_1_20:48164381-48164465:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.80859375	2	526.805311	1051.59607	2.118	0.0011158	2.2135	0.0011661	4.3315	0.0022818	526.8064931441075	99.786	1.2202	100.12	99.379	100.6	0.33295					60	16	4	0	0	0	0.14115	2	12028	12028;12052		85.359	21.152	1	16521000	+		48530	24244	32610	32623	54824;54825	54824					0.07233501936298126
RKMVPATIH	9	Unmodified	_RKMVPATIH_					0	0	0			REV__ENST00000244043.4_1_20:48164381-48164465:-|nuORF	REV__ENST00000244043.4_1_20:48164381-48164465:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8074340820312	2	526.805311	1051.59607	2.1591	0.0011374	1.94	0.001022	4.0991	0.0021594	526.8064897496846	100.49	2.6702	100.79	100.33	103	0.2999					222	71	6	0	0	0	0.19953	2	12255	12124;12255		73.975	5.1879	1	36320000	+		48531	24244	32610	32623	54826;54827	54827					0.07233501936298126
RKMVPATIH	9	Unmodified	_RKMVPATIH_					0	0	0			REV__ENST00000244043.4_1_20:48164381-48164465:-|nuORF	REV__ENST00000244043.4_1_20:48164381-48164465:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	526.805311	1051.59607	-0.10216	-5.382E-05	5.0685	0.0026701	4.9664	0.0026163	526.8076065250903	99.98	0.68266	100.19	99.734	100.42	0.21511	0.00061545	0.0024808	NaN	85.359	45	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	957180	+		48532	24244	32610	32623							0.07233501936298126
RKNAGRAPD	9	Unmodified	_RKNAGRAPD_					0	0	0			REV__ENST00000369750.3_1_6:83073582-83074524:+|nuORF	REV__ENST00000369750.3_1_6:83073582-83074524:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.7723693847656	2	492.770314	983.526075	-0.55043	-0.00027124	2.4234	0.0011942	1.873	0.00092294	492.7716650672891	72.523	0.71144	72.482	72.201	72.912	-0.04039					34	25	2	0	0	0	0.55097	1	7104	7104		49.442	1.7842	1	85038	+		48533	25628	32611	32624	54828	54828					0.03365339592039618
RKNASLAPPVC	11	Unmodified	_RKNASLAPPVC_					0	0	0			REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3206787109375	2	578.318783	1154.62301	-0.45444	-0.00026281	3.9046	0.0022581	3.4502	0.0019953	578.3212868289457	92.787	2.7225	92.787	91.761	94.484	0					150	62	3	0	0	0	0.43408	1	9046	9046		56.721	27.551	1	310260	+		48534	29739	32612	32625	54829	54829					0.05188565756816388
RKNASLAPPVC	11	Unmodified	_RKNASLAPPVC_					0	0	0			REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	578.318783	1154.62301	0.63653	0.00036812	2.2593	0.0013066	2.8959	0.0016747	578.3203291077863	92.395	2.7513	92.44	91.342	94.093	0.045448	-0.18743	-0.0010716	NaN	56.721	167	64	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410610	+		48535	29739	32612	32625							0.05188565756816388
RKNASLAPPVC	11	Unmodified	_RKNASLAPPVC_					0	0	0			REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	578.318783	1154.62301	0.33771	0.0001953	3.7623	0.0021758	4.1	0.0023711	578.3208580852869	92.146	2.4928	92.593	91.586	94.079	0.44661	-0.03452	0.00066671	NaN	56.721	111	58	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162070	+		48536	29739	32612	32625							0.05188565756816388
RKNASLAPPVC	11	Unmodified	_RKNASLAPPVC_					0	0	0			REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	REV__nc|ENSG00000100578|Q9BVV6-3|KIAA0586	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	578.318783	1154.62301	-1.4493	-0.00083815	5.5878	0.0032315	4.1385	0.0023934	578.3217648892189	92.287	2.1564	92.749	91.977	94.133	0.46249	0.12178	0.0027781	NaN	56.721	69	50	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	163930	+		48537	29739	32612	32625							0.05188565756816388
RKNDLMLY	8	Unmodified	_RKNDLMLY_					0	0	0			REV__nc|ENSG00000115415|P42224-2|STAT1	REV__nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.779541015625	2	526.781502	1051.54845	-0.32579	-0.00017162	-3.5893	-0.0018908	-3.9151	-0.0020624	526.779382089394	59.932	1.1266	60.322	60.014	61.14	0.39077					73	30	5	0	0	0	0.3646	2	6324	6324;6338		85.359	15.391	1	1864000	+		48538	18117	32613	32626	54830;54831	54830					0.02473802945451098
RKNDLMLY	8	Unmodified	_RKNDLMLY_					0	0	0			REV__nc|ENSG00000115415|P42224-2|STAT1	REV__nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7793579101562	2	526.781502	1051.54845	-0.40283	-0.0002122	-3.6928	-0.0019453	-4.0956	-0.0021575	526.7793154264734	59.804	1.2618	60.357	59.998	61.26	0.55323					60	33	3	0	0	0	0.67263	2	6345	6345;6369		68.485	20.569	1	1946700	+		48539	18117	32613	32626	54832;54833	54832					0.02473802945451098
RKNDLMLY	8	Unmodified	_RKNDLMLY_					0	0	0			REV__nc|ENSG00000115415|P42224-2|STAT1	REV__nc|ENSG00000115415|P42224-2|STAT1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	526.781502	1051.54845	-0.32579	-0.00017162	-3.5893	-0.0018908	-3.9151	-0.0020624	526.779382089394	59.932	1.1266	60.322	60.014	61.14	0.39077	-0.017384	4.7577E-05	NaN	85.359	73	30	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1864000	+		48540	18117	32613	32626							0.02473802945451098
RKNNNNKIF	9	Unmodified	_RKNNNNKIF_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|46|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|46|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|46|1|sense	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.8052368164062	2	574.320171	1146.62579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.77	1	113.7	113.2	114.2	-0.067215								0	0	0	0.31828	1	12325	12325		24.203	2.2429	1				48541	14699	32614	32627	54834	54834					0.058341572059816826
RKNNTYLVK	9	Unmodified	_RKNNTYLVK_					0	0	0		nc|ENSG00000166734|Q6P4E1-3|GOLM2;nc|ENSG00000166734|Q6P4E1-2|GOLM2;nc|ENSG00000166734|Q6P4E1-5|GOLM2;ENSG00000166734|ENST00000299957|GOLM2	nc|ENSG00000166734|Q6P4E1-3|GOLM2	nc|ENSG00000166734|Q6P4E1-3|GOLM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.7344360351562	2	568.332747	1134.65094	0.95136	0.00054069	-0.57938	-0.00032928	0.37198	0.00021141	568.3324240823694	89.314	1.2274	89.764	88.957	90.184	0.45058					45	29	2	0	0	0	0.20789	1	10427	10427		19.997	5.8596	1	306140			48542	6224	32615	32628	54835	54835					0.08900212008552444
RKNRLTIAPK	10	Unmodified	_RKNRLTIAPK_					0	0	0			REV__ENST00000317025.12_1_8:38187341-38189007:-|nuORF	REV__ENST00000317025.12_1_8:38187341-38189007:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.883056640625	2	598.882939	1195.75132	-0.19582	-0.00011727	3.5191	0.0021075	3.3232	0.0019902	598.8834369079352	44.015	1.2903	43.988	43.056	44.346	-0.026764					44	30	2	0	0	0	0.85981	1	3377	3377		35.152	8.4591	1	65214	+		48543	24959	32616	32629	54836	54836					0.16127869062211175
RKPDENRFAG	10	Unmodified	_RKPDENRFAG_					0	0	0			REV__chr6:15533395-15553873|17|11.76|0.71|4.05|-|1|TE_info:MER39,MER39_dup1336,ERV1,LTR,donor,+,15553873,15554253|DTNBP1,None|2	REV__chr6:15533395-15553873|17|11.76|0.71|4.05|-|1|TE_info:MER39,MER39_dup1336,ERV1,LTR,donor,+,15553873,15554253|DTNBP1,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	595.811279296875	2	595.307261	1188.59997	-0.71089	-0.0004232	4.163	0.0024783	3.4521	0.0020551	595.3096481578248	62.135	1.7915	62.523	61.957	63.748	0.38845					88	40	4	0	0	0	0.51302	1	6624	6624		54.776	3.4409	1	706330	+		48544	15876	32617	32630	54837	54837					0.013212629636882411
RKPDENRFAG	10	Unmodified	_RKPDENRFAG_					0	0	0			REV__chr6:15533395-15553873|17|11.76|0.71|4.05|-|1|TE_info:MER39,MER39_dup1336,ERV1,LTR,donor,+,15553873,15554253|DTNBP1,None|2	REV__chr6:15533395-15553873|17|11.76|0.71|4.05|-|1|TE_info:MER39,MER39_dup1336,ERV1,LTR,donor,+,15553873,15554253|DTNBP1,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	595.3070678710938	2	595.307261	1188.59997	-0.18529	-0.00011031	3.558	0.0021181	3.3727	0.0020078	595.3093976132366	62.024	1.6687	62.579	62.171	63.84	0.55449					83	38	4	0	0	0	0.35939	1	6624	6624		67.494	1.0644	1	666850	+		48545	15876	32617	32630	54838	54838					0.013212629636882411
RKPERGVSINQ	11	Unmodified	_RKPERGVSINQ_					0	0	0		nc|ENSG00000174547|Q9Y3B7-2|MRPL11	nc|ENSG00000174547|Q9Y3B7-2|MRPL11	nc|ENSG00000174547|Q9Y3B7-2|MRPL11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.861572265625	2	642.362567	1282.71058	-0.042366	-2.7214E-05	-0.63637	-0.00040878	-0.67874	-0.000436	642.3621422971506	112.55	0.35496	112.48	112.39	112.75	-0.063889					30	11	4	0	0	0	0.72739	1	12241	12241		27.047	3.5246	1	319940			48546	15107	32618	32631	54839	54839					0.08053482951959268
RKPESAPI	8	Unmodified	_RKPESAPI_					0	0	0			REV__ENSG00000112290|ENST00000392589|WASF1	REV__ENSG00000112290|ENST00000392589|WASF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2607727050781	2	449.261259	896.507966	-0.43537	-0.0001956	-1.0183	-0.0004575	-1.4537	-0.00065309	449.26067669224085	66.168	1.0089	66.554	66.153	67.162	0.38581					54	26	3	0	0	0	0.85277	1	7197	7197		25.45	3.7478	1	1011600	+		48547	17936	32619	32632	54840	54840					0.055572046173210765
RKPGSHAS	8	Unmodified	_RKPGSHAS_					0	0	0		ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2274169921875	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.86288	1	7375	7375		26.796	0	1	678130			48548	3454	32620	32633	54841	54841					0.015265941262214255
RKPNKLAPH	9	Unmodified	_RKPNKLAPH_					0	0	0		ENSG00000179299|ENST00000381782|NSUN7	ENSG00000179299|ENST00000381782|NSUN7	ENSG00000179299|ENST00000381782|NSUN7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.820556640625	2	530.82235	1059.63015	0.64668	0.00034327	-3.3293	-0.0017672	-2.6826	-0.001424	530.8205589668217	80.04	1.1775	80.181	79.815	80.992	0.14118					115	43	3	0	0	0	0.7932	1	7611	7611		25.45	0	1	892800			48549	7263	32621	32634	54842	54842					0.10271666419566827
RKPPGKAL	8	Unmodified	_RKPPGKAL_					0	0	0		ENST00000589599.5_2_17:73775146-73775806:-|nuORF;ENST00000254810.8_2_17:73775146-73775846:-|nuORF	ENST00000589599.5_2_17:73775146-73775806:-|nuORF	ENST00000589599.5_2_17:73775146-73775806:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7794189453125	2	433.782162	865.549771	0.28843	0.00012512	-3.8544	-0.001672	-3.566	-0.0015469	433.78110763255734	50.946	4.0891	50.995	50.343	54.432	0.049896					422	122	5	0	0	0	0.81724	1	4314	4314		14.664	0.88877	1	4871400			48550	9324	32622	32635	54843	54843					0.11161805096514854
RKPRIRDRLPK	11	Unmodified	_RKPRIRDRLPK_					0	0	0		ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.97412109375	3	478.975788	1433.90553	-1.7043	-0.00081634	-1.7797	-0.00085244	-3.484	-0.0016688	478.9749318699197	42.97	1.9218	42.97	41.976	43.898	0					105	47	4	0	0	0	0.79716	1	3057	3057		11.932	1.3705	1	335660			48551	3178	32623	32636	54844	54844					0.2059369854760007
RKPRIRDRLPK	11	Unmodified	_RKPRIRDRLPK_					0	0	0		ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9757080078125	3	478.975788	1433.90553	0.1614	7.7307E-05	-2.9471	-0.0014116	-2.7857	-0.0013343	478.974258997061	46.621	1.762	46.607	45.625	47.387	-0.013821					99	45	3	0	0	0	0.77511	1	3668	3668		16.53	3.5724	1	179760			48552	3178	32623	32636	54845	54845					0.2059369854760007
RKPRIRDRLPK	11	Unmodified	_RKPRIRDRLPK_					0	0	0		ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9740905761719	3	478.975788	1433.90553	0.006833	3.2729E-06	-2.5965	-0.0012437	-2.5897	-0.0012404	478.9744559828599	50.975	1.3531	50.973	50.261	51.614	-0.0020447					59	37	2	0	0	0	0.79476	1	4379	4379		12.433	1.4346	1	175970			48553	3178	32623	32636	54846	54846					0.2059369854760007
RKPRIRDRLPK	11	Unmodified	_RKPRIRDRLPK_					0	0	0		ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9746398925781	3	478.975788	1433.90553	-0.72157	-0.00034562	-1.7607	-0.00084335	-2.4823	-0.001189	478.97494935068806	47.94	1.1198	47.915	47.673	48.793	-0.025326					45	28	2	0	0	0	0.79945	1	4025	4025		11.455	2.2428	1	261310			48554	3178	32623	32636	54847	54847					0.2059369854760007
RKPRIRDRLPK	11	Unmodified	_RKPRIRDRLPK_					0	0	0		ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9750061035156	3	478.975788	1433.90553	-0.90815	-0.00043498	-1.7541	-0.00084019	-2.6623	-0.0012752	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.79476	1	3403	3403		12.433	2.7867	1	368580			48555	3178	32623	32636	54848	54848					0.2059369854760007
RKPRIRDRLPK	11	Unmodified	_RKPRIRDRLPK_					0	0	0		ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.30841064453125	3	478.975788	1433.90553	-0.90026	-0.0004312	-1.5139	-0.0007251	-2.4141	-0.0011563	479.3094231457841	50.589	1.3321	50.619	49.948	51.28	0.029629					91	40	3	0	0	0	0.81407	1	3924	3924		8.4073	1.3881	1	250790			48556	3178	32623	32636	54849	54849					0.2059369854760007
RKPRIRDRLPK	11	Unmodified	_RKPRIRDRLPK_					0	0	0		ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9746398925781	3	478.975788	1433.90553	0.29105	0.00013941	-3.0181	-0.0014456	-2.7271	-0.0013062	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.82945	1	3331	3331		7.3413	0.32217	1	395190			48557	3178	32623	32636	54850	54850					0.2059369854760007
RKPRIRDRLPK	11	Unmodified	_RKPRIRDRLPK_					0	0	0		ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9742126464844	3	478.975788	1433.90553	0.41435	0.00019846	-3.1102	-0.0014897	-2.6958	-0.0012912	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.79476	1	5108	5108		12.433	0.50046	1	131420			48558	3178	32623	32636	54851	54851					0.2059369854760007
RKPRIRDRLPK	11	Unmodified	_RKPRIRDRLPK_					0	0	0		ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9755859375	3	478.975788	1433.90553	-0.20548	-9.8418E-05	-2.506	-0.0012003	-2.7115	-0.0012987	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.79716	1	3509	3509		11.932	3.1331	1	468190			48559	3178	32623	32636	54852	54852					0.2059369854760007
RKPRIRDRLPK	11	Unmodified	_RKPRIRDRLPK_					0	0	0		ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	ENSG00000121361|ENST00000240662|KCNJ8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3089904785156	3	478.975788	1433.90553	-0.3619	-0.00017334	-1.9452	-0.00093169	-2.3071	-0.001105	478.9747142061381	50.735	1.3969	50.643	50.107	51.504	-0.091797					89	39	3	0	0	0	0.81021	1	3986	3986		9.2118	0.41249	1	284170			48560	3178	32623	32636	54853	54853					0.2059369854760007
RKPSHTSA	8	Unmodified	_RKPSHTSA_					0	0	0		nc|ENSG00000143924|Q9HC35-2|EML4;ENSG00000143924|ENST00000318522|EML4;ENST00000409040.1_1_2:42396751-42488438:+|nuORF	nc|ENSG00000143924|Q9HC35-2|EML4	nc|ENSG00000143924|Q9HC35-2|EML4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2408752441406	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.87479	1	7678	7678		30.504	1.3541	1	1094000			48561	4676	32624	32637	54854	54854					0.021228632977113193
RKPSHTSA	8	Unmodified	_RKPSHTSA_					0	0	0		nc|ENSG00000143924|Q9HC35-2|EML4;ENSG00000143924|ENST00000318522|EML4;ENST00000409040.1_1_2:42396751-42488438:+|nuORF	nc|ENSG00000143924|Q9HC35-2|EML4	nc|ENSG00000143924|Q9HC35-2|EML4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24090576171875	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.87479	1	7800	7800		30.504	0	1	968500			48562	4676	32624	32637	54855	54855					0.021228632977113193
RKPSHTSA	8	Unmodified	_RKPSHTSA_					0	0	0		nc|ENSG00000143924|Q9HC35-2|EML4;ENSG00000143924|ENST00000318522|EML4;ENST00000409040.1_1_2:42396751-42488438:+|nuORF	nc|ENSG00000143924|Q9HC35-2|EML4	nc|ENSG00000143924|Q9HC35-2|EML4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2413330078125	2	442.240858	882.467164	-0.73522	-0.00032514	0.71434	0.00031591	-0.020876	-9.2322E-06	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.87479	1	9252	9252		30.504	0	1	866900			48563	4676	32624	32637	54856	54856					0.021228632977113193
RKPTERARRLA	11	Unmodified	_RKPTERARRLA_					0	0	0			REV__ENST00000529940.5_1_11:8752463-8832809:-|nuORF	REV__ENST00000529940.5_1_11:8752463-8832809:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.943115234375	3	451.944376	1352.8113	-1.6541	-0.00074756	-0.56472	-0.00025522	-2.2188	-0.0010028	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.78683	1	4666	4666		14.086	1.1285	1	430100	+		48564	28274	32625	32638	54857	54857					0.14900559725469975
RKPTTFLLCV	10	Unmodified	_RKPTTFLLCV_					0	0	0		ENST00000542977.5_2_11:71746988-71752151:-|nuORF	ENST00000542977.5_2_11:71746988-71752151:-|nuORF	ENST00000542977.5_2_11:71746988-71752151:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.34375	2	589.341726	1176.6689	-0.3676	-0.00021664	2.4536	0.001446	2.086	0.0012294	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.85939	1	9714	9714		23.042	0	1	11103000			48565	13543	32626	32639	54858	54858					0.08763210939059718
RKPVCPILG	9	Unmodified	_RKPVCPILG_					0	0	0		nc|ENSG00000173421|Q8IYA8-2|IHO1;ENSG00000173421|ENST00000452691|IHO1	nc|ENSG00000173421|Q8IYA8-2|IHO1	nc|ENSG00000173421|Q8IYA8-2|IHO1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.794189453125	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.32	1	60.421	59.921	60.921	0.10082								0	0	0	0.33301	1	5212	5212		19.36	0	1				48566	6858	32627	32640	54859	54859					0.08783001050346684
RKPYHKKRKY	10	Unmodified	_RKPYHKKRKY_					0	0	0		ENST00000470475.1_1_1:45241268-45242451:+|nuORF;ENSG00000142937|ENST00000396651|RPS8	ENST00000470475.1_1_1:45241268-45242451:+|nuORF	ENST00000470475.1_1_1:45241268-45242451:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.6174621582031	3	468.6176	1402.83097	0.23239	0.0001089	-0.41717	-0.00019549	-0.18478	-8.6591E-05	468.6173072299361	16.211	0.34229	15.723	15.571	15.913	-0.48718					16	7	3	0	0	0	0.81117	1	99	99		38.754	22.224	1	130940			48567	4590	32628	32641	54860	54860					0.14566935736206688
RKPYHKKRKY	10	Unmodified	_RKPYHKKRKY_					0	0	0		ENST00000470475.1_1_1:45241268-45242451:+|nuORF;ENSG00000142937|ENST00000396651|RPS8	ENST00000470475.1_1_1:45241268-45242451:+|nuORF	ENST00000470475.1_1_1:45241268-45242451:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.6179504394531	3	468.6176	1402.83097	-0.11492	-5.3854E-05	0.11966	5.6073E-05	0.0047355	2.2192E-06	468.61756455175953	16.176	0.50177	15.577	15.422	15.924	-0.59873					25	10	4	0	0	0	0.69342	2	95	95;107		45.022	28.492	1	203790			48568	4590	32628	32641	54861;54862	54861					0.14566935736206688
RKPYIVKNVT	10	Unmodified	_RKPYIVKNVT_					0	0	0		nc|ENSG00000256771|O75346-2|ZNF253;ENSG00000256771|ENST00000589717|ZNF253	nc|ENSG00000256771|O75346-2|ZNF253	nc|ENSG00000256771|O75346-2|ZNF253	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.58514404296875	3	406.583674	1216.72919	0.73403	0.00029845	0.19556	7.9511E-05	0.92959	0.00037796	406.5836501066581	111.89	0.52492	111.96	111.59	112.12	0.069542					42	15	3	0	0	0	0.85259	1	12064	12064		20.03	4.0237	1	1799400			48569	8902	32629	32642	54863	54863					0.12949644593800258
RKQANPRRKN	10	Unmodified	_RKQANPRRKN_					0	0	0		ENSG00000169554|ENST00000627532|ZEB2;nc|ENSG00000169554|O60315-2|ZEB2;ENST00000472146.5_1_2:145187282-145277655:-|nuORF	ENSG00000169554|ENST00000627532|ZEB2	ENSG00000169554|ENST00000627532|ZEB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.376220703125	2	634.376343	1266.73813	-0.13881	-8.8058E-05	0.94902	0.00060203	0.81021	0.00051398	634.3768707133166	111.34	0.2866	111.28	111.08	111.37	-0.059937					16	8	2	0	0	0	0.85694	1	12120	12120		21.96	1.013	1	2796400			48570	6504	32630	32643	54864	54864					0.11543431002814941
RKQGLSKG	8	Unmodified	_RKQGLSKG_					0	0	0			REV__nc|ENSG00000165181|Q5VXU9-3|SHOC1	REV__nc|ENSG00000165181|Q5VXU9-3|SHOC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2654724121094	2	437.266876	872.519199	0.51664	0.00022591	-3.1072	-0.0013587	-2.5906	-0.0011328	437.26538540238977	22.419	1.3051	22.41	21.975	23.28	-0.0088234					141	67	4	0	0	0	0.90983	1	665	665		42.396	5.237	1	1945900	+		48571	21157	32631	32644	54865	54865					0.07784026711476599
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3084716796875	3	478.975788	1433.90553	-1.7043	-0.00081634	-1.7797	-0.00085244	-3.484	-0.0016688	478.9749318699197	42.97	1.9218	42.97	41.976	43.898	0					105	47	4	0	0	0	0.79224	1	3005	3005		12.957	0	1	335660			48572	2828	32632	32645	54866	54866					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.30889892578125	3	478.975788	1433.90553	-1.6306	-0.00078103	-0.71327	-0.00034164	-2.3439	-0.0011227	478.97540943407233	47.987	1.2617	47.987	47.56	48.821	0					77	38	3	0	0	0	0.7896	1	3718	3718		13.508	0	1	195490			48573	2828	32632	32645	54867	54867					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3103942871094	3	478.975788	1433.90553	-1.6051	-0.0007688	-1.0482	-0.00050206	-2.6533	-0.0012709	478.9751768575692	49.706	2.3794	49.706	48.538	50.918	0					127	57	3	0	0	0	0.79476	1	3813	3813		12.433	0	1	134370			48574	2828	32632	32645	54868	54868					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3095397949219	3	478.975788	1433.90553	-1.5808	-0.00075714	-0.99267	-0.00047547	-2.5734	-0.0012326	478.9752399041666	51.639	1.4994	51.639	50.814	52.314	0					68	39	2	0	0	0	0.72374	1	4183	4183		27.644	5.0823	1	107410			48575	2828	32632	32645	54869	54869					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9753112792969	3	478.975788	1433.90553	-1.5624	-0.00074834	-1.026	-0.00049144	-2.5884	-0.0012398	479.30961963549026	52.606	1.2577	52.606	52.057	53.314	0					69	33	3	0	0	0	0.76579	1	4367	4367		18.531	5.0231	1	125180			48576	2828	32632	32645	54870	54870					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.30865478515625	3	478.975788	1433.90553	0.1614	7.7307E-05	-2.9471	-0.0014116	-2.7857	-0.0013343	478.974258997061	46.621	1.762	46.607	45.625	47.387	-0.013821					99	45	3	0	0	0	0.77511	2	3787	3691;3787		16.53	3.5724	1	179760			48577	2828	32632	32645	54871;54872	54872					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3080749511719	3	478.975788	1433.90553	0.065395	3.1322E-05	-2.7829	-0.001333	-2.7175	-0.0013016	478.9743761165068	49.154	1.8702	49.148	48.387	50.257	-0.0056381					110	43	3	0	0	0	0.76892	3	4156	4037;4144;4156		17.833	4.3252	1	187140			48578	2828	32632	32645	54873;54874;54875	54875					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9743957519531	3	478.975788	1433.90553	-1.0377	-0.00049701	-2.8379	-0.0013593	-3.8755	-0.0018563	478.97440370036395	43.258	1.9554	43.222	42.189	44.144	-0.035816					117	46	4	0	0	0	0.74771	1	3445	3445		22.562	6.0317	1	472330			48579	2828	32632	32645	54876	54876					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.30914306640625	3	478.975788	1433.90553	-0.79395	-0.00038028	-1.9266	-0.0009228	-2.7206	-0.0013031	478.9747699681175	46.852	2.0236	46.823	45.583	47.607	-0.028782					130	52	3	0	0	0	0.77511	3	3716	3716;3781;3786		16.53	3.6335	1	237090			48580	2828	32632	32645	54877;54878;54879	54877					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9719543457031	3	478.975788	1433.90553	-0.59951	-0.00028715	-1.9641	-0.00094078	-2.5637	-0.0012279	479.30919988874916	53.475	3.0495	53.45	51.564	54.614	-0.02475					117	77	2	0	0	0	0.79476	1	4759	4759		12.433	3.6335	1	217940			48581	2828	32632	32645	54880	54880					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3065490722656	3	478.975788	1433.90553	-0.13683	-6.554E-05	-1.9753	-0.00094612	-2.1121	-0.0010117	478.974750908379	57.254	1.3987	57.225	56.666	58.065	-0.02866					58	41	2	0	0	0	0.79224	3	5271	5271;5293;5333		12.957	2.7867	1	137920			48582	2828	32632	32645	54881;54882;54883	54881					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97540283203125	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.158	1	59.127	58.627	59.627	-0.030888								0	0	0	0.56276	1	5529	5529		9.2118	3.513	1				48583	2828	32632	32645	54884	54884					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.97601318359375	3	478.975788	1433.90553	-1.3068	-0.00062591	-1.2424	-0.00059507	-2.5492	-0.001221	478.9750986281663	49.151	3.7005	49.151	47.803	51.503	0.00016785					187	96	3	0	0	0	0.77803	1	4387	4387		15.921	2.4127	1	240410			48584	2828	32632	32645	54885	54885					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9750671386719	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.154	1	59.188	58.688	59.688	0.033905								0	0	0	0.56276	1	5452	5452		11.932	3.898	1				48585	2828	32632	32645	54886	54886					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9739074707031	3	478.975788	1433.90553	-0.90277	-0.0004324	-1.6609	-0.00079555	-2.5637	-0.001228	478.97487033218596	49.369	1.842	49.394	48.497	50.339	0.025578					115	47	3	0	0	0	0.7896	1	3823	3823		13.508	0.55046	1	238510			48586	2828	32632	32645	54887	54887					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9764404296875	3	478.975788	1433.90553	-0.89818	-0.00043021	-1.4459	-0.00069257	-2.3441	-0.0011228	478.9750533889841	51.817	1.8474	51.852	50.982	52.829	0.034588					134	56	3	0	0	0	0.77511	2	4093	4093;4194		16.53	3.0219	1	276750			48587	2828	32632	32645	54888;54889	54888					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97601318359375	3	478.975788	1433.90553	-0.89395	-0.00042818	-1.3922	-0.00066681	-2.2861	-0.001095	478.9750464670604	54.211	0.95452	54.267	53.609	54.563	0.055614					56	30	3	0	0	0	0.72374	1	4445	4445		27.644	4.266	1	270440			48588	2828	32632	32645	54890	54890					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9742126464844	3	478.975788	1433.90553	-0.88979	-0.00042619	-1.3561	-0.00064952	-2.2459	-0.0010757	478.97502977834864	56.875	1.1479	56.946	56.618	57.766	0.071835					88	55	2	0	0	0	0.81021	2	4860	4829;4860		9.2118	0	1	207280			48589	2828	32632	32645	54891;54892	54892					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.973388671875	3	478.975788	1433.90553	-0.87611	-0.00041963	-1.5053	-0.00072102	-2.3814	-0.0011407	478.97493608424577	63.878	0.46339	63.998	63.763	64.226	0.12004					40	21	3	0	0	0	0.74771	1	5598	5598		22.562	6.0317	1	87395			48590	2828	32632	32645	54893	54893					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2776794433594	3	478.975788	1433.90553	-0.84534	-0.0004049	-0.92341	-0.00044229	-1.7687	-0.00084719	478.9755500542312	81.11	0.42846	81.255	81.057	81.485	0.14513					10	9	2	0	0	0	0.17784	1	7728	7728		28.577	12.656	1	30674			48591	2828	32632	32645	54894	54894					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.311279296875	3	478.975788	1433.90553	0.29105	0.00013941	-3.0181	-0.0014456	-2.7271	-0.0013062	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.75121	3	3325	3325;3442;3476		21.78	12.569	1	395190			48592	2828	32632	32645	54895;54896;54897	54895					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9762268066406	3	478.975788	1433.90553	0.30578	0.00014646	-2.6417	-0.0012653	-2.3359	-0.0011188	478.97445511920006	47.863	1.3107	47.901	47.243	48.554	0.037731					72	41	3	0	0	0	0.75779	1	3525	3525		20.315	6.229	1	244030			48593	2828	32632	32645	54898	54898					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97607421875	3	478.975788	1433.90553	0.32204	0.00015425	-2.7165	-0.0013011	-2.3944	-0.0011469	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.79476	2	3919	3919;3941		12.433	2.7867	1	307830			48594	2828	32632	32645	54899;54900	54899					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.310302734375	3	478.975788	1433.90553	0.36809	0.00017631	-2.7907	-0.0013367	-2.4226	-0.0011604	478.9743048162478	54.877	1.9768	54.968	54.012	55.989	0.091167					129	57	3	0	0	0	0.79224	1	4582	4582		12.957	3.7457	1	277080			48595	2828	32632	32645	54901	54901					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9739685058594	3	478.975788	1433.90553	0.38747	0.00018559	-2.2837	-0.0010938	-1.8962	-0.00090825	478.9745687436675	56.933	0.89649	57.038	56.685	57.582	0.1055					78	40	3	0	0	0	0.76892	2	4845	4845;4854		17.833	5.4003	1	258090			48596	2828	32632	32645	54902;54903	54902					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97369384765625	3	478.975788	1433.90553	0.4058	0.00019437	-2.7433	-0.001314	-2.3375	-0.0011196	478.97428271058664	59.004	0.64193	59.118	58.79	59.432	0.11397					30	23	2	0	0	0	0.79224	1	5070	5070		12.957	1.5029	1	163150			48597	2828	32632	32645	54904	54904					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9744567871094	3	478.975788	1433.90553	0.45213	0.00021656	-3.1063	-0.0014878	-2.6542	-0.0012713	478.97429795671763	64.171	0.962	64.295	63.877	64.839	0.12397					52	35	2	0	0	0	0.7896	2	5654	5644;5654		13.508	4.3985	1	113580			48598	2828	32632	32645	54905;54906	54906					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.973388671875	3	478.975788	1433.90553	-0.085376	-4.0893E-05	-3.08	-0.0014753	-3.1654	-0.0015161	479.30837143687245	43.044	1.6592	42.994	42.147	43.806	-0.050308					106	44	4	0	0	0	0.79224	2	2992	2964;2992		12.957	2.7983	1	375540			48599	2828	32632	32645	54907;54908	54908					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97576904296875	3	478.975788	1433.90553	-0.20548	-9.8418E-05	-2.506	-0.0012003	-2.7115	-0.0012987	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.77205	1	3377	3377		17.167	4.2093	1	468190			48600	2828	32632	32645	54909	54909					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.975341796875	3	478.975788	1433.90553	-0.25402	-0.00012167	-2.023	-0.00096899	-2.2771	-0.0010907	478.9747709878051	47.62	1.4426	47.532	47.242	48.685	-0.087646					53	40	2	0	0	0	0.7896	2	3649	3606;3649		13.508	0.55046	1	370120			48601	2828	32632	32645	54910;54911	54911					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97686767578125	3	478.975788	1433.90553	-0.3619	-0.00017334	-1.9452	-0.00093169	-2.3071	-0.001105	478.9747142061381	50.735	1.3969	50.643	50.107	51.504	-0.091797					89	39	3	0	0	0	0.76892	2	3960	3960;4028		17.833	4.7339	1	284170			48602	2828	32632	32645	54912;54913	54912					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.973388671875	3	478.975788	1433.90553	-0.41434	-0.00019846	-1.9974	-0.00095669	-2.4117	-0.0011551	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.79224	4	4149	4113;4149;4391;4414		12.957	1.1774	1	341610			48603	2828	32632	32645	54914;54915;54916;54917	54915					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9754943847656	3	478.975788	1433.90553	-0.60023	-0.00028749	-1.7397	-0.00083329	-2.34	-0.0011208	478.9750252013462	57.613	0.46197	57.596	57.239	57.701	-0.016426					39	22	2	0	0	0	0.78683	2	4872	4852;4872		14.086	4.4399	1	124190			48604	2828	32632	32645	54918;54919	54919					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9739990234375	3	478.975788	1433.90553	-0.71901	-0.00034439	-1.8715	-0.00089638	-2.5905	-0.0012408	479.3092394614084	60.917	0.55768	60.925	60.553	61.11	0.0081177					45	21	3	0	0	0	0.81219	1	5259	5259		8.7993	0	1	136290			48605	2828	32632	32645	54920	54920					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97509765625	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.003	1	53.941	53.441	54.441	-0.062065								0	0	0	0.56276	1	4448	4448		15.337	3.4051	1				48606	2828	32632	32645	54921	54921					0.2059369854760007
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	478.975788	1433.90553	-1.7649	-0.00084533	-0.31135	-0.00014913	-2.0762	-0.00099446	479.3100722384134	46.618	0.64622	47.541	47.395	48.041	0.92315	-0.29154	0.0020283	NaN	20.315	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	589970			48607	2828	32632	32645							0.2059369854760007
RKQKRKEKRKR	11	Unmodified	_RKQKRKEKRKR_					0	0	0		ENST00000507394.1_1_4:100479199-100480495:-|nuORF;ENSG00000145331|ENST00000394876|TRMT10A	ENST00000507394.1_1_4:100479199-100480495:-|nuORF	ENST00000507394.1_1_4:100479199-100480495:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.80908203125	3	514.337608	1539.99099	-0.25151	-0.00012936	-2.3946	-0.0012316	-2.6461	-0.001361	514.3359892879041	50.963	0.16676	50.871	50.761	50.928	-0.091797					8	5	2	0	0	0	0.18343	1	4037	4037		8.7993	0.39205	1	40115			48608	4761	32633	32646	54922	54922					0.24259863733232123
RKQLPNES	8	Unmodified	_RKQLPNES_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2;ENST00000574518.1_1_17:7674005-7689702:+|nuORF	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.2664489746094	2	486.267073	970.519593	1.0382	0.00050483	-0.85752	-0.00041699	0.18065	8.7843E-05	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.88915	1	9122	9122		35.201	3.2459	1	1819100			48609	7573	32634	32647	54923	54923					0.03315401640657001
RKQMIAVKIKE	11	Unmodified	_RKQMIAVKIKE_					0	0	0		nc|ENSG00000080561|Q9UJV3-2|MID2;ENSG00000080561|ENST00000262843|MID2	nc|ENSG00000080561|Q9UJV3-2|MID2	nc|ENSG00000080561|Q9UJV3-2|MID2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.6099853515625	3	448.611235	1342.81188	-0.12449	-5.5849E-05	-4.0982	-0.0018385	-4.2227	-0.0018943	448.94365307156517	77.124	0.95989	77.076	76.709	77.669	-0.048264					104	45	3	0	0	0	0.75457	1	7649	7649		21.032	3.8655	1	533170			48610	1445	32635	32648	54924	54924					0.15418218330273703
RKQMKRWQRWR	11	Unmodified	_RKQMKRWQRWR_					0	0	0		ENST00000216456.6_1_14:68126581-68129225:-|nuORF	ENST00000216456.6_1_14:68126581-68129225:-|nuORF	ENST00000216456.6_1_14:68126581-68129225:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.9796142578125	3	553.647677	1657.9212	-0.43621	-0.00024151	4.0809	0.0022594	3.6447	0.0020179	553.6498984843062	110.61	0.36798	110.61	110.42	110.79	0					13	9	2	0	0	0	0.18131	1	11479	11479		17.833	8.187	1	59436			48611	9141	32636	32649	54925	54925					0.1185566179296984
RKQRNSRKK	9	Unmodified	_RKQRNSRKK_					0	0	0		ENST00000507446.1_1_4:761063-761393:-|nuORF	ENST00000507446.1_1_4:761063-761393:-|nuORF	ENST00000507446.1_1_4:761063-761393:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.58038330078125	3	400.91805	1199.73232	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.31	1	117.23	116.73	117.73	-0.07531								0	0	0	0.33057	1	12588	12588		20.03	2.8637	1				48612	12956	32637	32650	54926	54926					0.14044332491153
RKQVLKHPGT	10	Unmodified	_RKQVLKHPGT_					0	0	0			REV__ENSG00000107554|ENST00000324109|DNMBP	REV__ENSG00000107554|ENST00000324109|DNMBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3551025390625	2	582.354014	1162.69348	0.16989	9.8934E-05	-0.87197	-0.0005078	-0.70208	-0.00040886	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.85694	1	12697	12697		21.96	0.27414	1	635410	+		48613	17661	32638	32651	54927	54927					0.11863607136797327
RKQVSPGK	8	Unmodified	_RKQVSPGK_					0	0	0			REV__nc|ENSG00000187772|Q6ZN17-2|LIN28B	REV__nc|ENSG00000187772|Q6ZN17-2|LIN28B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2745056152344	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.19	1	113.17	112.67	113.67	-0.024811								0	0	0	0.29264	1	12521	12521		29.15	3.5755	1		+		48614	22945	32639	32652	54928	54928					0.08152313228526964
RKQVVNLS	8	Unmodified	_RKQVVNLS_					0	0	0		ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28790283203125	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.87479	1	12784	12784		30.504	3.7075	1	3080300			48615	7607	32640	32653	54929	54929					0.08748582400005489
RKRAKPIKV	9	Unmodified	_RKRAKPIKV_					0	0	0			REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3732299804688	2	548.377292	1094.74003	-1.4257	-0.00078185	-3.9799	-0.0021825	-5.4057	-0.0029643	548.3749403834641	37.356	2.5025	37.356	35.98	38.483	0					111	59	3	0	0	0	0.7932	1	2127	2127		11.511	0.64546	1	203100	+		48616	19448	32641	32654	54930	54930					0.19645091758752642
RKRAPGAS	8	Unmodified	_RKRAPGAS_					0	0	0		ENST00000379977.7_3_10:5994794-5994992:-|nuORF	ENST00000379977.7_3_10:5994794-5994992:-|nuORF	ENST00000379977.7_3_10:5994794-5994992:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7508239746094	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.346	1	77.398	76.898	77.898	0.052696								0	0	0	0.29703	1	7486	7486		37.159	1.5408	1				48617	10908	32642	32655	54931	54931					0.061148733972345326
RKRDAGPLL	9	Unmodified	_RKRDAGPLL_					0	0	0			REV__ENSG00000163792|ENST00000296096|TCF23	REV__ENSG00000163792|ENST00000296096|TCF23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.31787109375	2	513.314358	1024.61416	0.40552	0.00020816	4.0183	0.0020626	4.4238	0.0022708	513.3165443291848	55.171	1.2841	55.262	54.835	56.119	0.091164					59	39	2	0	0	0	0.78536	1	4607	4607		29.15	1.2673	1	269410	+		48618	20971	32643	32656	54932	54932					0.10283960182664487
RKRDPKSKY	9	Unmodified	_RKRDPKSKY_					0	0	0			REV__nc|ENSG00000153707|P23468-7|PTPRD	REV__nc|ENSG00000153707|P23468-7|PTPRD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3427124023438	2	589.343646	1176.67274	-0.65315	-0.00038493	-0.88363	-0.00052076	-1.5368	-0.00090569	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.7932	1	9624	9624		26.693	3.1702	1	5584100	+		48619	29937	32644	32657	54933	54933					0.09147016757151505
RKRDPKSKY	9	Unmodified	_RKRDPKSKY_					0	0	0			REV__nc|ENSG00000153707|P23468-7|PTPRD	REV__nc|ENSG00000153707|P23468-7|PTPRD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3430786132812	2	589.343646	1176.67274	0.83312	0.00049099	-2.1148	-0.0012464	-1.2817	-0.00075536	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.78983	2	9861	9861;9874		27.882	3.3631	1	20363000	+		48620	29937	32644	32657	54934;54935	54934					0.09147016757151505
RKRDVLGYSK	10	Unmodified	_RKRDVLGYSK_					0	0	0		ENSG00000180902|ENST00000321264|D2HGDH	ENSG00000180902|ENST00000321264|D2HGDH	ENSG00000180902|ENST00000321264|D2HGDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3563842773438	2	611.356754	1220.69895	0.8676	0.00053041	-1.2868	-0.00078671	-0.41922	-0.00025629	611.3560720152175	95.924	5.0581	96.087	95.071	100.13	0.16317					363	118	6	0	0	0	0.86272	1	9883	9883		24.519	0.99649	1	16539000			48621	7357	32645	32658	54936	54936					0.09743285928584555
RKRELKAM	8	Unmodified	_RKRELKAM_					0	0	0		ENST00000421004.3_1_5:77655801-77656260:-|nuORF	ENST00000421004.3_1_5:77655801-77656260:-|nuORF	ENST00000421004.3_1_5:77655801-77656260:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.31396484375	2	516.310761	1030.60697	2.7794	0.001435	3.1012	0.0016012	5.8806	0.0030362	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.87922	4	10935	10683;10888;10935;11007		38.806	2.9866	1	67991000			48622	11458	32646	32659	54937;54938;54939;54940	54939					0.09288904310574253
RKRELKAM	8	Unmodified	_RKRELKAM_					0	0	0		ENST00000421004.3_1_5:77655801-77656260:-|nuORF	ENST00000421004.3_1_5:77655801-77656260:-|nuORF	ENST00000421004.3_1_5:77655801-77656260:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3143920898438	2	516.310761	1030.60697	1.9037	0.0009829	4.3859	0.0022645	6.2896	0.0032474	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.91977	1	12005	12005		45.952	8.7928	1	22616000			48623	11458	32646	32659	54941	54941					0.09288904310574253
RKRFCRRRRKR	11	Unmodified	_RKRFCRRRRKR_					0	0	0			REV__ENST00000257626.11_2_7:77035403-77045687:-|nuORF	REV__ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.564453125	4	405.253743	1616.98587	-0.18872	-7.6478E-05	4.0946	0.0016593	3.9058	0.0015829	405.25514282242744	63.691	0.32864	63.69	63.485	63.814	-0.00078583					18	14	2	0	0	0	0.18413	1	5924	5924		1.2319	0.91967	1	52242	+		48624	24344	32647	32660	54942	54942					0.20205281389621632
RKRFCRRRRKR	11	Unmodified	_RKRFCRRRRKR_					0	0	0			REV__ENST00000257626.11_2_7:77035403-77045687:-|nuORF	REV__ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5638732910156	4	405.253743	1616.98587	1.507	0.00061071	1.8007	0.00072974	3.3077	0.0013405	405.2539102850464	62.862	0.34132	62.89	62.775	63.116	0.028133					19	14	2	0	0	0	0.1841	1	5879	5879		1.3219	1.3219	1	37448	+		48625	24344	32647	32660	54943	54943					0.20205281389621632
RKRFCRRRRKR	11	Unmodified	_RKRFCRRRRKR_					0	0	0			REV__ENST00000257626.11_2_7:77035403-77045687:-|nuORF	REV__ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.2432250976562	3	540.002565	1616.98587	0.49112	0.00026521	3.0285	0.0016354	3.5197	0.0019006	540.0042856070917	61.933	0.29521	62.054	61.9	62.196	0.1209					13	11	2	0	0	0	0.18331	1	5382	5382		5.6988	4.3769	1	151580	+		48626	24344	32647	32660	54944	54944					0.20205281389621632
RKRFCRRRRKR	11	Unmodified	_RKRFCRRRRKR_					0	0	0			REV__ENST00000257626.11_2_7:77035403-77045687:-|nuORF	REV__ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		4	405.253743	1616.98587	-0.15055	-6.101E-05	4.7838	0.0019386	4.6332	0.0018776	405.2562327971207	62.959	0.1551	62.926	62.842	62.997	-0.033714	0.017648	0.0024312	NaN	1.2319	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68571	+		48627	24344	32647	32660							0.20205281389621632
RKRFCRRRRKR	11	Unmodified	_RKRFCRRRRKR_					0	0	0			REV__ENST00000257626.11_2_7:77035403-77045687:-|nuORF	REV__ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	540.002565	1616.98587	-0.58226	-0.00031442	2.3655	0.0012774	1.7833	0.00096297	540.3375916780545	61.638	0.46518	62.192	62.006	62.472	0.55386	0.069101	-0.0007127	NaN	1.2319	12	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	158430	+		48628	24344	32647	32660							0.20205281389621632
RKRFKRHQL	9	Unmodified	_RKRFKRHQL_					0	0	0		ENSG00000184492|ENST00000306507|FOXD4L1;ENSG00000204779|ENST00000377420|FOXD4L5;ENSG00000184659|ENST00000377413|FOXD4L4;ENSG00000273514|ENST00000622588|FOXD4L6;ENSG00000187559|ENST00000342833|FOXD4L3	ENSG00000184492|ENST00000306507|FOXD4L1	ENSG00000184492|ENST00000306507|FOXD4L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	423.5976257324219	3	423.59854	1267.77379	-0.18424	-7.8043E-05	-1.8559	-0.00078616	-2.0401	-0.0008642	423.5976787176537	105.93	2.5264	105.91	105.23	107.75	-0.025146					222	59	5	0	0	0	0.78058	1	11482	11482		30.318	10.003	1	5735600			48629	7617	32648	32661	54945	54945					0.15061513250520875
RKRFKRHQL	9	Unmodified	_RKRFKRHQL_					0	0	0		ENSG00000184492|ENST00000306507|FOXD4L1;ENSG00000204779|ENST00000377420|FOXD4L5;ENSG00000184659|ENST00000377413|FOXD4L4;ENSG00000273514|ENST00000622588|FOXD4L6;ENSG00000187559|ENST00000342833|FOXD4L3	ENSG00000184492|ENST00000306507|FOXD4L1	ENSG00000184492|ENST00000306507|FOXD4L1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8931274414062	2	634.894172	1267.77379	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.35	1	107.48	106.98	107.98	0.13866								0	0	0	0.30053	1	11528	11528		30.504	0.18592	1				48630	7617	32648	32661	54946	54946					0.15061513250520875
RKRFKRHQL	9	Unmodified	_RKRFKRHQL_					0	0	0		ENSG00000184492|ENST00000306507|FOXD4L1;ENSG00000204779|ENST00000377420|FOXD4L5;ENSG00000184659|ENST00000377413|FOXD4L4;ENSG00000273514|ENST00000622588|FOXD4L6;ENSG00000187559|ENST00000342833|FOXD4L3	ENSG00000184492|ENST00000306507|FOXD4L1	ENSG00000184492|ENST00000306507|FOXD4L1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8939819335938	2	634.894172	1267.77379	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.41	1	107.5	107	108	0.091255								0	0	0	0.28386	1	11532	11532		37.159	6.8414	1				48631	7617	32648	32661	54947	54947					0.15061513250520875
RKRGKPGTH	9	Unmodified	_RKRGKPGTH_					0	0	0		nc|ENSG00000185404|Q9H930-1|SP140L;nc|ENSG00000185404|Q9H930-2|SP140L;ENSG00000185404|ENST00000415673|SP140L;ENST00000462156.1_1_2:231249961-231253449:+|nuORF	nc|ENSG00000185404|Q9H930-1|SP140L	nc|ENSG00000185404|Q9H930-1|SP140L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8109741210938	2	518.809774	1035.60499	2.0333	0.0010549	-0.97117	-0.00050385	1.0622	0.00055106	518.8092333336378	100.03	1.6601	100.36	99.811	101.47	0.33295					136	41	4	0	0	0	0.51307	1	12118	12118		51.335	1.8939	1	17274000			48632	7710	32649	32662	54948	54948					0.08861611616998744
RKRGKRRYF	9	Unmodified	_RKRGKRRYF_					0	0	0		ENST00000520464.1_1_5:172507634-172535847:+|nuORF;ENSG00000164463|ENST00000296953|CREBRF;nc|ENSG00000164463|Q8IUR6-3|CREBRF	ENST00000520464.1_1_5:172507634-172535847:+|nuORF	ENST00000520464.1_1_5:172507634-172535847:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.9267578125	3	422.926657	1265.75814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.014	1	59.128	58.628	59.628	0.11396								0	0	0	0.301	1	5048	5048		30.318	3.568	1				48633	5966	32650	32663	54949	54949					0.13589226733461146
RKRGLIGLTVP	11	Unmodified	_RKRGLIGLTVP_					0	0	0		ENST00000564399.1_1_16:69355005-69355937:+|nuORF	ENST00000564399.1_1_16:69355005-69355937:+|nuORF	ENST00000564399.1_1_16:69355005-69355937:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.93023681640625	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.76251	1	3638	3638		19.263	4.569	1	2526100			48634	13886	32651	32664	54950	54950					0.17569039722025082
RKRHKFIIWYL	11	Unmodified	_RKRHKFIIWYL_					0	0	0			REV__ENST00000294997.10_1_1:207888693-207911758:+|nuORF	REV__ENST00000294997.10_1_1:207888693-207911758:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	520.648681640625	3	520.6489	1558.92487	-0.19093	-9.941E-05	0.94665	0.00049287	0.75571	0.00039346	520.649325376911	107.84	0.83096	107.98	107.24	108.07	0.13866					61	20	6	0	0	0	0.80813	1	11599	11599		9.6461	0	1	322590000	+		48635	24694	32652	32665	54951	54951					0.16776654838531613
RKRHRYLWKNF	11	Unmodified	_RKRHRYLWKNF_					0	0	0		ENST00000438724.5_1_13:79951611-79952941:-|nuORF	ENST00000438724.5_1_13:79951611-79952941:-|nuORF	ENST00000438724.5_1_13:79951611-79952941:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.3242797851562	3	535.307537	1602.90078	0.022778	1.2193E-05	-1.9422	-0.0010397	-1.9195	-0.0010275	535.3065549489172	107.85	0.098679	107.99	107.93	108.03	0.13866					4	2	2	0	0	0	0.181	1	11601	11601		18.531	12.832	1	1026500			48636	11757	32653	32666	54952	54952					0.12344814404832505
RKRICILVFLR	11	Unmodified	_RKRICILVFLR_					0	0	0		nc|ENSG00000184999|Q63ZE4-2|SLC22A10;ENSG00000184999|ENST00000332793|SLC22A10	nc|ENSG00000184999|Q63ZE4-2|SLC22A10	nc|ENSG00000184999|Q63ZE4-2|SLC22A10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.3049011230469	3	472.970986	1415.89113	-1.6394	-0.00077538	1.6537	0.00078215	0.014314	6.7703E-06	472.9717127008119	49.434	3.3366	49.434	48.538	51.875	0					243	82	4	0	0	0	0.79476	1	3995	3995		12.433	2.7867	1	1017000			48637	7665	32654	32667	54953	54953					0.1998191007510286
RKRIDVLANAL	11	Unmodified	_RKRIDVLANAL_					0	0	0		ENST00000381055.7_1_5:64447501-64447618:-|nuORF	ENST00000381055.7_1_5:64447501-64447618:-|nuORF	ENST00000381055.7_1_5:64447501-64447618:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	423.5976257324219	3	423.598094	1267.77245	-0.96194	-0.00040747	0.13168	5.5777E-05	-0.83026	-0.0003517	423.59805160624353	105.99	2.401	105.99	105.33	107.73	0					158	55	4	0	0	0	0.77061	1	10936	10936		15.921	0	1	1845700			48638	10943	32655	32668	54954	54954					0.14927834371087556
RKRIITHI	8	Unmodified	_RKRIITHI_					0	0	0			REV__ENSG00000174197|ENST00000703841|MGA	REV__ENSG00000174197|ENST00000703841|MGA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.810302734375	2	518.840542	1035.66653	1.9465	0.0010099	4.089	0.0021215	6.0355	0.0031315	518.8427264059043	98.352	0.16615	98.714	98.608	98.774	0.36136					5	3	2	0	0	0	0.4196	1	11842	11842		33.516	10.473	1	50957	+		48639	21979	32656	32669	54955	54955					0.1501254331628843
RKRILINPGN	10	Unmodified	_RKRILINPGN_					0	0	0		nc|ENSG00000156113|Q12791-3|KCNMA1	nc|ENSG00000156113|Q12791-3|KCNMA1	nc|ENSG00000156113|Q12791-3|KCNMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8671264648438	2	590.867289	1179.72002	-0.64255	-0.00037966	-1.0172	-0.00060105	-1.6598	-0.00098071	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.71042	2	11328	11328;11364		44.117	1.7207	1	52912000			48640	15010	32657	32670	54956;54957	54956					0.13735296028153243
RKRILINPGN	10	Unmodified	_RKRILINPGN_					0	0	0		nc|ENSG00000156113|Q12791-3|KCNMA1	nc|ENSG00000156113|Q12791-3|KCNMA1	nc|ENSG00000156113|Q12791-3|KCNMA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.86767578125	2	590.867289	1179.72002	1.3812	0.0008161	-2.2271	-0.0013159	-0.8459	-0.00049981	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.85934	1	12553	12553		35.618	6.4687	1	6168400			48641	15010	32657	32670	54958	54958					0.13735296028153243
RKRILINPGN	10	Unmodified	_RKRILINPGN_					0	0	0		nc|ENSG00000156113|Q12791-3|KCNMA1	nc|ENSG00000156113|Q12791-3|KCNMA1	nc|ENSG00000156113|Q12791-3|KCNMA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8668212890625	2	590.867289	1179.72002	3.2055	0.001894	-4.0778	-0.0024095	-0.87234	-0.00051544	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.86589	1	12653	12653		29.15	1.2673	1	6398400			48642	15010	32657	32670	54959	54959					0.13735296028153243
RKRIVPICRI	10	Unmodified	_RKRIVPICRI_					0	0	0		ENST00000353205.5_1_6:41062183-41065126:+|nuORF	ENST00000353205.5_1_6:41062183-41065126:+|nuORF	ENST00000353205.5_1_6:41062183-41065126:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.6034240722656	3	418.604415	1252.79141	-1.7442	-0.00073012	2.5573	0.0010705	0.81318	0.0003404	418.60537062211796	49.043	4.3192	49.043	47.911	52.23	0					175	108	3	0	0	0	0.85086	1	3800	3800		19.263	1.4295	1	101990			48643	10329	32658	32671	54960	54960					0.17513092461149427
RKRKAKPS	8	Unmodified	_RKRKAKPS_					0	0	0			REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2850341796875	2	485.817067	969.619582	-0.40294	-0.00019576	2.8066	0.0013635	2.4036	0.0011677	485.8183742962222	48.268	0.36524	49.18	48.932	49.298	0.91199					11	8	2	0	0	0	0.4196	1	4655	4655		29.15	0	1	141310	+		48644	16532	32659	32672	54961	54961					0.13355683765132653
RKRKLIIP	8	Unmodified	_RKRKLIIP_					0	0	0			REV__ENSG00000126705|ENST00000673934|AHDC1	REV__ENSG00000126705|ENST00000673934|AHDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.3606567382812	2	512.361111	1022.70767	-0.052808	-2.7057E-05	0.34006	0.00017423	0.28725	0.00014718	512.3611914628581	74.266	1.3455	74.309	74.086	75.431	0.0429					113	47	3	0	0	0	0.81548	1	7173	7173		20.482	0	1	281850	+		48645	18709	32660	32673	54962	54962					0.1972230435574147
RKRKMSSK	8	Unmodified	_RKRKMSSK_					0	0	0		nc|ENSG00000205097|Q64ET8|FRG2;ENSG00000225899|ENST00000425520|FRG2B;ENSG00000205097|ENST00000504750|FRG2	nc|ENSG00000205097|Q64ET8|FRG2	nc|ENSG00000205097|Q64ET8|FRG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.81011962890625	2	510.808385	1019.60222	4.704	0.0024028	4.3142	0.0022037	9.0182	0.0046066	510.81038527976574	106.02	0.73642	106.21	105.87	106.6	0.18647					70	29	3	0	0	0	0.889	1	13008	13008		35.152	3.1972	1	1170500			48646	8510	32661	32674	54963	54963					0.09320020167831444
RKRKQPPTTV	10	Unmodified	_RKRKQPPTTV_					0	0	0		ENSG00000204406|ENST00000642680|MBD5;nc|ENSG00000204406|Q9P267|MBD5;nc|ENSG00000204406|Q9P267-2|MBD5	ENSG00000204406|ENST00000642680|MBD5	ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.8731689453125	2	605.872571	1209.73059	1.0692	0.00064779	-1.8241	-0.0011052	-0.75496	-0.00045741	605.8712819289403	100.09	1.5113	100.3	99.817	101.33	0.21512					93	35	4	0	0	0	0.85939	1	10505	10505		23.042	1.0826	1	798340			48647	8441	32662	32675	54964	54964					0.13411278682542616
RKRKVISFGG	10	Unmodified	_RKRKVISFGG_					0	0	0		ENSG00000230178|ENST00000456475|OR4F3;ENSG00000176269|ENST00000320901|OR4F21	ENSG00000230178|ENST00000456475|OR4F3	ENSG00000230178|ENST00000456475|OR4F3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3568725585938	2	574.356557	1146.69856	1.1071	0.0006359	-2.2805	-0.0013098	-1.1733	-0.0006739	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.86272	1	10657	10657		24.519	0	1	708140			48648	7069	32663	32676	54965	54965					0.13107910999406158
RKRKVISLTY	10	Unmodified	_RKRKVISLTY_					0	0	0		ENST00000487363.5_1_9:15485934-15510186:-|nuORF	ENST00000487363.5_1_9:15485934-15510186:-|nuORF	ENST00000487363.5_1_9:15485934-15510186:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.3982543945312	2	632.398422	1262.78229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.077	1	16.125	15.625	16.625	0.047804								0	0	0	0.45132	1	114	114		27.882	3.3631	1				48649	12600	32664	32677	54966	54966					0.16141022376473302
RKRKVTVT	8	Unmodified	_RKRKVTVT_					0	0	0			REV__nc|ENSG00000085274|Q9NPC7-3|MYNN	REV__nc|ENSG00000085274|Q9NPC7-3|MYNN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3007507324219	2	494.324725	986.634898	-0.67519	-0.00033376	3.589	0.0017741	2.9138	0.0014404	494.3255665330652	97.377	0.41552	97.425	97.291	97.706	0.048164					16	9	3	0	0	0	0.4196	1	10384	10384		23.042	5.6775	1	155230	+		48650	16886	32665	32678	54967	54967					0.14104550562319673
RKRKYLLSDS	10	Unmodified	_RKRKYLLSDS_					0	0	0			REV__nc|ENSG00000188227|Q6ZN11-3|ZNF793	REV__nc|ENSG00000188227|Q6ZN11-3|ZNF793	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3687133789062	2	633.369861	1264.72517	0.88638	0.00056141	-2.1201	-0.0013428	-1.2337	-0.0007814	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.86218	1	9830	9830		32.812	6.749	1	5166300	+		48651	22988	32666	32679	54968	54968					0.10339555100085818
RKRLFTLC	8	Unmodified	_RKRLFTLC_					0	0	0			REV__ENST00000298875.8_1_14:92628093-92628159:+|nuORF	REV__ENST00000298875.8_1_14:92628093-92628159:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.81005859375	2	518.807854	1035.60115	0.73707	0.0003824	3.9869	0.0020684	4.724	0.0024508	518.8098800745994	96.38	1.5271	96.785	95.769	97.296	0.40451					65	36	2	0	0	0	0.88915	1	11592	11592		35.201	1.0282	1	2354000	+		48652	24737	32667	32680	54969	54969					0.08477805798929694
RKRLLQQRNN	10	Unmodified	_RKRLLQQRNN_					0	0	0			REV__ENSG00000116991|ENST00000674635|SIPA1L2;REV__ENSG00000105738|ENST00000222345|SIPA1L3	REV__ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.6010437011719	3	442.600609	1324.78	-0.15208	-6.7312E-05	1.1295	0.00049991	0.9774	0.0004326	442.6010716654733	103.97	1.4842	103.96	103.51	105	-0.0035706					84	35	4	0	0	0	0.85259	1	11191	11191		20.03	0	1	603650	+		48653	18239;17567	32668	32681	54970	54970					0.1305998669138262
RKRLPAHPT	9	Unmodified	_RKRLPAHPT_					0	0	0		ENST00000373991.3_1_20:34542249-34542378:-|nuORF	ENST00000373991.3_1_20:34542249-34542378:-|nuORF	ENST00000373991.3_1_20:34542249-34542378:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3272094726562	2	538.327799	1074.64105	1.8602	0.0010014	-3.4699	-0.001868	-1.6098	-0.00086659	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.78058	1	12204	12204		30.504	0	1	19391000			48654	10761	32669	32682	54971	54971					0.10671068793840277
RKRMSIIVRTP	11	Unmodified	_RKRMSIIVRTP_					0	0	0		ENSG00000081923|ENST00000648908|ATP8B1	ENSG00000081923|ENST00000648908|ATP8B1	ENSG00000081923|ENST00000648908|ATP8B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.9482116699219	3	452.946729	1355.81836	1.1592	0.00052504	2.4878	0.0011268	3.6469	0.0016519	452.947744260499	107.13	1.326	107.16	106.32	107.65	0.035622					97	30	5	0	0	0	0.70847	1	11766	11766		30.139	1.5624	1	2905000			48655	1475	32670	32683	54972	54972					0.1546815628166769
RKRNRKSGKLN	11	Unmodified	_RKRNRKSGKLN_					0	0	0		ENSG00000204406|ENST00000642680|MBD5;nc|ENSG00000204406|Q9P267|MBD5	ENSG00000204406|ENST00000642680|MBD5	ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.9482727050781	3	452.948009	1355.8222	-0.13654	-6.1846E-05	0.97436	0.00044134	0.83782	0.00037949	452.9483614950571	107.37	0.93114	107.33	106.73	107.66	-0.034409					72	21	5	0	0	0	0.69687	1	11674	11674		32.034	3.4574	1	2765200			48656	8441	32671	32684	54973	54973					0.15851962099759476
RKRNRKSGKLN	11	Unmodified	_RKRNRKSGKLN_					0	0	0		ENSG00000204406|ENST00000642680|MBD5;nc|ENSG00000204406|Q9P267|MBD5	ENSG00000204406|ENST00000642680|MBD5	ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.94854736328125	3	452.948009	1355.8222	1.1592	0.00052504	-0.33804	-0.00015311	0.82111	0.00037192	452.947744260499	107.13	1.326	107.16	106.32	107.65	0.035622					97	30	5	0	0	0	0.73277	1	11742	11742		25.892	1.6599	1	2905000			48657	8441	32671	32684	54974	54974					0.15851962099759476
RKRNRKSGKLN	11	Unmodified	_RKRNRKSGKLN_					0	0	0		ENSG00000204406|ENST00000642680|MBD5;nc|ENSG00000204406|Q9P267|MBD5	ENSG00000204406|ENST00000642680|MBD5	ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.94830322265625	3	452.948009	1355.8222	-1.1932	-0.00054047	1.5898	0.0007201	0.39658	0.00017963	452.9486366147782	106.8	1.2296	106.95	106.47	107.7	0.14843					124	29	6	0	0	0	0.73277	1	11462	11462		25.892	2.5138	1	8171700			48658	8441	32671	32684	54975	54975					0.15851962099759476
RKRNRKSGKLN	11	Unmodified	_RKRNRKSGKLN_					0	0	0		ENSG00000204406|ENST00000642680|MBD5;nc|ENSG00000204406|Q9P267|MBD5	ENSG00000204406|ENST00000642680|MBD5	ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.9487609863281	3	452.948009	1355.8222	0.75692	0.00034285	-0.14994	-6.7914E-05	0.60699	0.00027493	452.94782570061545	106.9	1.1199	106.99	106.6	107.72	0.091255					115	26	5	0	0	0	0.73647	1	11479	11479		25.068	0.83596	1	5690500			48659	8441	32671	32684	54976	54976					0.15851962099759476
RKRPPFPRRFA	11	Unmodified	_RKRPPFPRRFA_					0	0	0			REV__ENST00000310837.8_1_17:39845180-39847075:+|nuORF	REV__ENST00000310837.8_1_17:39845180-39847075:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.6233825683594	3	476.621345	1426.8422	0.78009	0.00037181	3.9265	0.0018714	4.7066	0.0022432	476.6231329059609	107.87	0.64194	107.96	107.37	108.01	0.084404					50	15	6	0	0	0	0.75121	1	11585	11585		21.78	4.6137	1	181130000	+		48660	24896	32672	32685	54977	54977					0.1458575783035485
RKRPRDAL	8	Unmodified	_RKRPRDAL_					0	0	0		ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA	ENSG00000011007|ENST00000613537|ELOA	ENSG00000011007|ENST00000613537|ELOA	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3097839355469	2	506.312149	1010.60975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.694	1	63.724	63.224	64.224	0.030243								0	0	0	0.29978	1	5583	5583		21.96	3.6355	1				48661	776	32673	32686	54978	54978					0.1048649575974423
RKRQKNVF	8	Unmodified	_RKRQKNVF_					0	0	0			REV__nc|ENSG00000080854|Q9UPX0|IGSF9B	REV__nc|ENSG00000080854|Q9UPX0|IGSF9B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3269653320312	2	538.327799	1074.64105	0.070451	3.7926E-05	-0.97487	-0.0005248	-0.90442	-0.00048687	538.3272381280076	104.36	1.1253	104.53	103.89	105.01	0.17096					89	27	4	0	0	0	0.87922	1	11073	11073		31.955	2.7848	1	1335300	+		48662	16812	32674	32687	54979	54979					0.10671068793840277
RKRQSSFLK	9	Unmodified	_RKRQSSFLK_					0	0	0			REV__ENSG00000163637|ENST00000638394|PRICKLE2	REV__ENSG00000163637|ENST00000638394|PRICKLE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.3456420898438	2	575.346189	1148.67783	0.94019	0.00054093	-1.3159	-0.0007571	-0.37572	-0.00021617	575.3454322863764	98.249	1.7248	98.634	98.18	99.904	0.38548					107	42	5	0	0	0	0.78536	1	11862	11862		29.15	1.0681	1	3140900	+		48663	20951	32675	32688	54980	54980					0.10943320619730912
RKRRAVRRQPL	11	Unmodified	_RKRRAVRRQPL_					0	0	0			REV__ENST00000264258.7_1_2:101618763-101619227:+|nuORF	REV__ENST00000264258.7_1_2:101618763-101619227:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97528076171875	3	479.311282	1434.91202	-0.67452	-0.00032331	-3.9951	-0.0019149	-4.6696	-0.0022382	479.3093558580906	59.578	0.87093	59.579	59.126	59.997	0.00051117					40	27	2	0	0	0	0.17289	1	5103	5103		21.78	6.4429	1	137950	+		48664	24469	32676	32689	54981	54981					0.21195636498964632
RKRREELF	8	Unmodified	_RKRREELF_					0	0	0		nc|ENSG00000225921|Q9UMY1-2|NOL7;ENSG00000225921|ENST00000451315|NOL7	nc|ENSG00000225921|Q9UMY1-2|NOL7	nc|ENSG00000225921|Q9UMY1-2|NOL7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3303833007812	2	567.330539	1132.64652	0.79571	0.00045143	-2.2136	-0.0012558	-1.4178	-0.00080439	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.88915	1	9247	9247		35.201	0	1	18145000			48665	8711	32677	32690	54982	54982					0.08550747585650242
RKRREQQKH	9	Unmodified	_RKRREQQKH_					0	0	0		nc|ENSG00000140694|O95453-4|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;ENSG00000140694|ENST00000437198|PARN	nc|ENSG00000140694|O95453-4|PARN	nc|ENSG00000140694|O95453-4|PARN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3689575195312	2	633.368518	1264.72248	1.5977	0.0010119	-0.63628	-0.000403	0.96137	0.0006089	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.7932	1	11812	11812		30.318	21.624	1	10012000			48666	4454	32678	32691	54983	54983					0.1007114448577795
RKRRGNLPKE	10	Unmodified	_RKRRGNLPKE_					0	0	0		nc|ENSG00000118707|Q9GZN2-2|TGIF2;ENSG00000118707|ENST00000373872|TGIF2;chr20:36574635-36578741|58|36.57|0.66|5.78|+|ENST00000611732|TGIF2-RAB5IF,TGIF2-RAB5IF	nc|ENSG00000118707|Q9GZN2-2|TGIF2	nc|ENSG00000118707|Q9GZN2-2|TGIF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.384033203125	2	627.381094	1252.74764	-1.2002	-0.00075297	3.4349	0.002155	2.2347	0.001402	627.3830835136717	111.36	0.55814	111.34	111.22	111.78	-0.019882					41	20	3	0	0	0	0.80179	1	11874	11874		39.253	8.9351	1	7923200			48667	14867	32679	32692	54984	54984					0.1313719928834871
RKRRNTSHIK	10	Unmodified	_RKRRNTSHIK_					0	0	0			REV__ENST00000356093.6_1_1:29313974-29314025:+|nuORF	REV__ENST00000356093.6_1_1:29313974-29314025:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.5975036621094	3	432.597088	1294.76943	0.73482	0.00031788	0.60922	0.00026355	1.344	0.00058143	432.59735068529625	106.11	1.1677	106.21	105.57	106.74	0.099007					121	28	6	0	0	0	0.84816	1	11386	11386		12.433	1.4346	1	31122000	+		48668	25385	32680	32693	54985	54985					0.13384004036925035
RKRRNTSHIK	10	Unmodified	_RKRRNTSHIK_					0	0	0			REV__ENST00000356093.6_1_1:29313974-29314025:+|nuORF	REV__ENST00000356093.6_1_1:29313974-29314025:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3926391601562	2	648.391993	1294.76943	0.94475	0.00061257	0.70304	0.00045585	1.6478	0.0010684	648.3923298671006	107.11	0.98898	107.2	106.69	107.68	0.091255					92	23	4	0	0	0	0.86348	1	11465	11465		31.53	1.2121	1	51640000	+		48669	25385	32680	32693	54986	54986					0.13384004036925035
RKRRPQDGPR	10	Unmodified	_RKRRPQDGPR_					0	0	0		ENSG00000099381|ENST00000262519|SETD1A	ENSG00000099381|ENST00000262519|SETD1A	ENSG00000099381|ENST00000262519|SETD1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3692016601562	2	633.368518	1264.72248	-0.087569	-5.5464E-05	1.1358	0.00071935	1.0482	0.00066389	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.86218	1	9802	9802		32.812	3.6424	1	7059800			48670	1762	32681	32694	54987	54987					0.1007114448577795
RKRRRFLSPQ	10	Unmodified	_RKRRRFLSPQ_					0	0	0		nc|ENSG00000065883|Q14004-2|CDK13;ENSG00000065883|ENST00000181839|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.6081848144531	3	448.609216	1342.80582	0.6314	0.00028325	-0.6302	-0.00028271	0.0012043	5.4025E-07	448.60887470875934	77.01	0.99304	77.058	76.682	77.675	0.047981					82	45	2	0	0	0	0.86551	1	7520	7520		14.694	0	1	702210			48671	1144	32682	32695	54988	54988					0.14812880933641281
RKRRRRCFRKR	11	Unmodified	_RKRRRRCFRKR_					0	0	0		ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5641174316406	4	405.253743	1616.98587	-0.18899	-7.6587E-05	4.3863	0.0017776	4.1973	0.001701	405.506304606314	60.44	1.0884	60.426	59.433	60.522	-0.013733					38	27	2	0	0	0	0.18386	1	5586	5586		5.6988	4.3769	1	135900			48672	9356	32683	32696	54989	54989					0.20205281389621632
RKRRRRCFRKR	11	Unmodified	_RKRRRRCFRKR_					0	0	0		ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5648193359375	4	405.253743	1616.98587	0.36371	0.0001474	3.9302	0.0015927	4.2939	0.0017401	405.2553510653691	59.737	0.87914	59.851	59.389	60.268	0.11416					45	26	2	0	0	0	0.1838	1	5162	5162		3.2113	2.8708	1	136490			48673	9356	32683	32696	54990	54990					0.20205281389621632
RKRRRRCFRKR	11	Unmodified	_RKRRRRCFRKR_					0	0	0		ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2549743652344	4	405.253743	1616.98587	0.40603	0.00016454	3.0802	0.0012483	3.4862	0.0014128	405.25460534696685	64.235	0.78822	64.359	64.152	64.94	0.12397					37	27	2	0	0	0	0.1841	1	5731	5731		3.2113	1.8894	1	81124			48674	9356	32683	32696	54991	54991					0.20205281389621632
RKRRRRCFRKR	11	Unmodified	_RKRRRRCFRKR_					0	0	0		ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5641174316406	4	405.253743	1616.98587	0.37344	0.00015134	4.0426	0.0016383	4.416	0.0017896	405.506157580752	60.803	0.63423	60.922	60.526	61.16	0.11879					40	25	3	0	0	0	0.18421	1	5256	5256		0.3405	0	1	80415			48675	9356	32683	32696	54992	54992					0.20205281389621632
RKRRRRCFRKR	11	Unmodified	_RKRRRRCFRKR_					0	0	0		ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.299560546875	3	540.002565	1616.98587	0.45192	0.00024404	3.1248	0.0016874	3.5767	0.0019314	540.3385553924599	57.552	0.12596	57.657	57.563	57.689	0.1055					8	5	2	0	0	0	0.18413	1	4877	4877		3.026	1.6072	1	104680			48676	9356	32683	32696	54993	54993					0.20205281389621632
RKRRRRCFRKR	11	Unmodified	_RKRRRRCFRKR_					0	0	0		ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.2293701171875	4	405.253743	1616.98587	0.13994	5.6713E-05	0.7263	0.00029434	0.86624	0.00035105	405.5054225026084	47.732	0.18791	48.201	48.082	48.27	0.46941					5	4	2	0	0	0	0.18422	1	4573	4573		1.3219	1.0097	1	42351			48677	9356	32683	32696	54994	54994					0.20205281389621632
RKRRRRCFRKR	11	Unmodified	_RKRRRRCFRKR_					0	0	0		ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		4	405.253743	1616.98587	-0.18866	-7.6455E-05	4.7048	0.0019066	4.5162	0.0018302	405.25529821963727	64.306	1.0607	64.305	63.88	64.941	-0.00078583	-0.043234	0.0013212	NaN	3.2113	36	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108300			48678	9356	32683	32696							0.20205281389621632
RKRRRRCFRKR	11	Unmodified	_RKRRRRCFRKR_					0	0	0		ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		4	405.253743	1616.98587	-0.30616	-0.00012407	4.3936	0.0017805	4.0875	0.0016565	405.5062863705471	64.416	0.75071	64.382	64.143	64.893	-0.034256	0.033248	0.00081678	NaN	3.2113	23	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48422			48679	9356	32683	32696							0.20205281389621632
RKRRRRCFRKR	11	Unmodified	_RKRRRRCFRKR_					0	0	0		ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	540.002565	1616.98587	-0.4134	-0.00022324	3.8927	0.0021021	3.4793	0.0018789	540.0047027009728	57.755	0.29833	57.738	57.635	57.934	-0.016426	0.040663	0.00035175	NaN	3.026	19	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77267			48680	9356	32683	32696							0.20205281389621632
RKRRWYKT	8	Unmodified	_RKRRWYKT_					0	0	0		nc|ENSG00000054392|Q5VTY9-5|HHAT;nc|ENSG00000054392|Q5VTY9-2|HHAT	nc|ENSG00000054392|Q5VTY9-5|HHAT	nc|ENSG00000054392|Q5VTY9-5|HHAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.360107421875	2	597.354348	1192.69414	3.085	0.0018428	3.6722	0.0021936	6.7571	0.0040364	597.3562180293547	100.36	3.052	100.31	99.202	102.25	-0.052116					175	71	4	0	0	0	0.85277	1	10962	10962		25.45	2.4077	1	3981300			48681	14754	32684	32697	54995	54995					0.10550446576485228
RKRRYVRRKQQ	11	Unmodified	_RKRRYVRRKQQ_					0	0	0			REV__ENSG00000119403|ENST00000373896|PHF19	REV__ENSG00000119403|ENST00000373896|PHF19	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	525.2549438476562	3	525.325591	1572.95494	0.23429	0.00012308	-4.3505	-0.0022854	-4.1162	-0.0021623	525.3242249057586	38.328	0.36924	38.27	38.038	38.407	-0.057915					13	10	2	0	0	0	0.1841	1	2229	2229		3.2113	1.9794	1	60267	+		48682	18352	32685	32698	54996	54996					0.19138406556385235
RKRSAALQP	9	Unmodified	_RKRSAALQP_					0	0	0		ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF	ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087768554688	2	513.811982	1025.60941	-1.4445	-0.00074222	-4.4488	-0.0022859	-5.8934	-0.0030281	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.73802	1	3695	3695		37.812	2.6108	1	1675700			48683	4219	32686	32699	54997	54997					0.09763076039894258
RKRSIKYDSL	10	Unmodified	_RKRSIKYDSL_					0	0	0		nc|ENSG00000109685|O96028-5|NSD2;nc|ENSG00000109685|O96028-3|NSD2;ENSG00000109685|ENST00000508803|NSD2;nc|ENSG00000109685|O96028-7|NSD2;nc|ENSG00000109685|O96028-6|NSD2;ENST00000508355.5_1_4:1902372-1920392:+|nuORF	nc|ENSG00000109685|O96028-5|NSD2	nc|ENSG00000109685|O96028-5|NSD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.9163513183594	3	422.582333	1264.72517	2.9692	0.0012547	-3.8305	-0.0016187	-0.86127	-0.00036396	422.58062707178027	97.728	3.629	97.776	96.312	99.941	0.048164					208	84	4	0	0	0	0.86698	1	10441	10441		28.081	0	1	464700			48684	2476	32687	32700	54998	54998					0.10339555100085818
RKRSRKELLNF	11	Unmodified	_RKRSRKELLNF_					0	0	0		ENSG00000189306|ENST00000323013|RRP7A	ENSG00000189306|ENST00000323013|RRP7A	ENSG00000189306|ENST00000323013|RRP7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	482.9598388671875	3	482.959915	1445.85791	1.0063	0.00048598	-0.72934	-0.00035224	0.27692	0.00013374	482.9594620642882	19.053	0.41886	19.127	18.907	19.326	0.073465					30	12	3	0	0	0	0.68431	1	356	356		34.087	3.0184	1	57363			48685	8001	32688	32701	54999	54999					0.15281999556736992
RKRSRKELLNF	11	Unmodified	_RKRSRKELLNF_					0	0	0		ENSG00000189306|ENST00000323013|RRP7A	ENSG00000189306|ENST00000323013|RRP7A	ENSG00000189306|ENST00000323013|RRP7A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	482.959915	1445.85791	-0.89812	-0.00043375	1.2797	0.00061806	0.38162	0.0001843	482.96060033616334	19.327	0.32497	19.371	19.148	19.473	0.043747	0.15867	0.00094076	NaN	34.087	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41107			48686	8001	32688	32701							0.15281999556736992
RKRSRKELLNF	11	Unmodified	_RKRSRKELLNF_					0	0	0		ENSG00000189306|ENST00000323013|RRP7A	ENSG00000189306|ENST00000323013|RRP7A	ENSG00000189306|ENST00000323013|RRP7A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	482.959915	1445.85791	0.064721	3.1258E-05	-0.080741	-3.8994E-05	-0.016019	-7.7366E-06	482.9595761592262	19.031	0.31467	19.102	18.965	19.28	0.070711	-0.1102	-0.0010304	NaN	34.087	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57446			48687	8001	32688	32701							0.15281999556736992
RKRSRKELLNF	11	Unmodified	_RKRSRKELLNF_					0	0	0		ENSG00000189306|ENST00000323013|RRP7A	ENSG00000189306|ENST00000323013|RRP7A	ENSG00000189306|ENST00000323013|RRP7A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	482.959915	1445.85791	0.71476	0.0003452	-0.35522	-0.00017156	0.35955	0.00017365	482.9596796379056	19.123	0.23092	19.1	18.982	19.213	-0.023342	-0.11215	-0.0014281	NaN	34.087	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63136			48688	8001	32688	32701							0.15281999556736992
RKRTEPTG	8	Unmodified	_RKRTEPTG_					0	0	0			REV__ENSG00000247746|ENST00000500968|USP51	REV__ENSG00000247746|ENST00000500968|USP51	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7671813964844	2	472.76724	943.519927	-0.93004	-0.00043969	0.85085	0.00040225	-0.079188	-3.7437E-05	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.87479	1	8089	8089		30.504	0	1	526610	+		48689	23858	32689	32702	55000	55000					0.04590821360523023
RKRTQDALIVL	11	Unmodified	_RKRTQDALIVL_					0	0	0		ENSG00000184408|ENST00000331113|KCND2	ENSG00000184408|ENST00000331113|KCND2	ENSG00000184408|ENST00000331113|KCND2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.273193359375	3	438.273499	1311.79867	-1.4634	-0.00064136	0.1078	4.7245E-05	-1.3556	-0.00059411	438.2734550831373	106.96	1.4325	107.1	106.6	108.03	0.14105					150	35	5	0	0	0	0.71803	1	11440	11440		28.577	0.93281	1	5372900			48690	7608	32690	32703	55001	55001					0.15524103542543344
RKRTQDALIVL	11	Unmodified	_RKRTQDALIVL_					0	0	0		ENSG00000184408|ENST00000331113|KCND2	ENSG00000184408|ENST00000331113|KCND2	ENSG00000184408|ENST00000331113|KCND2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2734069824219	3	438.273499	1311.79867	0.73902	0.00032389	-1.8768	-0.00082255	-1.1378	-0.00049865	438.27258626082147	106.07	0.86208	106.16	105.83	106.7	0.099007					90	20	5	0	0	0	0.75457	1	11360	11360		21.032	0	1	9065500			48691	7608	32690	32703	55002	55002					0.15524103542543344
RKRVARVC	8	Unmodified	_RKRVARVC_					0	0	0		ENST00000336180.6_1_7:73498316-73500123:+|nuORF	ENST00000336180.6_1_7:73498316-73500123:+|nuORF	ENST00000336180.6_1_7:73498316-73500123:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3002624511719	2	494.30327	986.591987	-1.6335	-0.00080746	-3.3781	-0.0016698	-5.0116	-0.0024772	494.30150238478427	100.99	1.3749	101.14	100.57	101.95	0.15505					78	33	3	0	0	0	0.89457	1	10528	10528		37.028	2.8559	1	773220			48692	10169	32691	32704	55003	55003					0.09815457233241887
RKRVGRGC	8	Carbamidomethyl (C)	_RKRVGRGC(Carbamidomethyl (C))_	RKRVGRGC(1)		RKRVGRGC(41)		0	1	0			REV__nc|ENSG00000140873|Q8TE60-2|ADAMTS18	REV__nc|ENSG00000140873|Q8TE60-2|ADAMTS18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7797546386719	2	494.782702	987.55085	-1.4939	-0.00073914	-3.3999	-0.0016822	-4.8938	-0.0024214	494.78084579093485	83.794	2.8854	83.932	82.379	85.265	0.13811					127	66	3	0	0	0	0.90465	1	8119	8119		40.573	13.88	1	242900	+		48693	19648	32692	32705	55004	55004	248				0.05657696193782158
RKRVLERKRRY	11	Unmodified	_RKRVLERKRRY_					0	0	0		nc|ENSG00000198300|Q9GZU2-3|PEG3;chr19:56824514-56836018|39|11.51|0.17|6.04|-|ENST00000647621|ZIM2,ZIM2;chr19:56817579-56818600|38|19.68|0.62|5.0|-|ENST00000647621|PEG3,ZIM2;nc|ENSG00000198300|Q9GZU2-2|PEG3;nc|ENSG00000198300|Q9GZU2-4|PEG3;chr19:56836104-56837752|35|12.57|0.22|5.86|-|ENST00000649428|ZIM2,PEG3;chr19:56833763-56836018|38|26.37|0.74|5.16|-|ENST00000650632|PEG3,ZIM2;chr19:56833420-56836018|53|36.06|0.68|5.73|-|ENST00000649233|PEG3,ZIM2;chr19:56827246-56836018|17|10.18|0.0|19.96|-|ENST00000650102|PEG3,ZIM2;chr19:56826463-56833290|37|25.22|0.63|5.33|-|ENST00000649233|ZIM2,PEG3;chr19:56826463-56829783|33|12.79|0.36|5.15|-|ENST00000649876|ZIM2,PEG3;chr19:56826463-56827134|36|14.94|0.37|5.33|-|ENST00000650102|ZIM2,PEG3;chr19:56824514-56826388|41|23.68|0.7|5.09|-|ENST00000650102|ZIM2,ZIM2;chr19:56824427-56833290|51|35.98|0.96|5.23|-|ENST00000650632|ZIM2,PEG3;ENSG00000198300|ENST00000326441|PEG3;chr19:56824741-56836018|33|11.52|0.18|5.99|-|ENST00000599577|ZIM2,ZIM2	nc|ENSG00000198300|Q9GZU2-3|PEG3	nc|ENSG00000198300|Q9GZU2-3|PEG3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	520.6499633789062	3	520.662092	1558.96445	0.82267	0.00042833	2.323	0.0012095	3.1456	0.0016378	520.6631004777653	107.88	0.10036	107.96	107.87	107.98	0.084412					4	2	2	0	0	0	0.18415	1	11603	11603		2.8518	2.8518	1	1762400			48694	295	32693	32706	55005	55005					0.20732174841896267
RKRVVDES	8	Unmodified	_RKRVVDES_					0	0	0		ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1;ENST00000475379.1_1_14:55408210-55411247:-|nuORF	ENSG00000198554|ENST00000360586|WDHD1	ENSG00000198554|ENST00000360586|WDHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7798767089844	2	494.780348	987.546142	1.0619	0.0005254	-1.0199	-0.00050462	0.042	2.0781E-05	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.884	1	8983	8983		33.516	1.5607	1	657500			48695	8286	32694	32707	55006	55006					0.05187090532001548
RKRWLPKIK	9	Unmodified	_RKRWLPKIK_					0	0	0		ENSG00000148411|ENST00000277554|NACC2	ENSG00000148411|ENST00000277554|NACC2	ENSG00000148411|ENST00000277554|NACC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.879638671875	2	612.906217	1223.79788	0.2879	0.00017646	3.6186	0.0022178	3.9065	0.0023943	612.9084738571039	104.59	0.57874	104.63	104.17	104.75	0.039856					27	13	3	0	0	0	0.20789	1	11387	11387		38.806	14.603	1	350550			48696	4961	32695	32708	55007	55007					0.1949335368415177
RKSGVAGDRVF	11	Unmodified	_RKSGVAGDRVF_					0	0	0			REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3327026367188	2	596.333279	1190.652	-0.57959	-0.00034563	-0.049534	-2.9539E-05	-0.62912	-0.00037517	596.3331084008277	96.35	3.5496	96.416	95.306	98.855	0.06591					255	82	4	0	0	0	0.638	1	10103	10103		40.058	2.2467	1	1242500	+		48697	23619	32696	32709	55008	55008					0.06430426377460208
RKSKKKKRY	9	Unmodified	_RKSKKKKRY_					0	0	0		ENSG00000185272|ENST00000400577|RBM11	ENSG00000185272|ENST00000400577|RBM11	ENSG00000185272|ENST00000400577|RBM11	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	407.9290466308594	3	407.934929	1220.78296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.18	1	114.18	113.68	114.68	0								0	0	0	0.36103	1	11778	11778		11.636	1.0491	1				48698	7696	32697	32710	55009	55009					0.18139861816189295
RKSLAPEP	8	Unmodified	_RKSLAPEP_					0	0	0		ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	ENSG00000065060|ENST00000192788|BLTP3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.26055908203125	2	449.261259	896.507966	0.47902	0.00021521	-2.0825	-0.00093559	-1.6035	-0.00072038	449.2601268412696	70.509	0.67209	70.638	70.305	70.977	0.12965					54	34	2	0	0	0	0.91005	1	6413	6413		42.474	1.9018	1	260720			48699	1119	32698	32711	55010	55010					0.05557204617332445
RKSLKAALKH	10	Unmodified	_RKSLKAALKH_					0	0	0		ENSG00000112039|ENST00000229769|FANCE	ENSG00000112039|ENST00000229769|FANCE	ENSG00000112039|ENST00000229769|FANCE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.369384765625	2	576.372207	1150.72986	-0.74313	-0.00042832	-4.0021	-0.0023067	-4.7452	-0.002735	576.3696767962949	37.867	1.5412	38.18	37.746	39.287	0.31312					100	38	4	0	0	0	0.82886	1	3070	3070		37.812	3.639	1	2629900			48700	2629	32699	32712	55011	55011					0.1605248403348014
RKSLKAALKH	10	Unmodified	_RKSLKAALKH_					0	0	0		ENSG00000112039|ENST00000229769|FANCE	ENSG00000112039|ENST00000229769|FANCE	ENSG00000112039|ENST00000229769|FANCE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.36962890625	2	576.372207	1150.72986	-0.38703	-0.00022307	-4.4362	-0.0025569	-4.8232	-0.00278	576.369487649421	37.688	1.7157	38.174	37.83	39.546	0.48581					111	42	4	0	0	0	0.77314	2	3087	3076;3087		40.778	12.896	1	1850300			48701	2629	32699	32712	55012;55013	55013					0.1605248403348014
RKSNTGSLTI	10	Unmodified	_RKSNTGSLTI_					0	0	0			REV__ENSG00000048405|ENST00000265827|ZNF800	REV__ENSG00000048405|ENST00000265827|ZNF800	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.806640625	2	538.806562	1075.59857	-1.4886	-0.00080208	1.7597	0.00094812	0.27105	0.00014604	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.86348	1	9019	9019		31.53	2.3803	1	783690	+		48702	16365	32700	32713	55014	55014					0.0637962887494723
RKSPFIKLPN	10	Unmodified	_RKSPFIKLPN_					0	0	0			REV__ENST00000542274.5_1_16:68679206-68732300:+|nuORF	REV__ENST00000542274.5_1_16:68679206-68732300:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.5802917480469	3	400.580152	1198.71863	2.7173	0.0010885	-1.7826	-0.00071408	0.93471	0.00037443	400.5792998697629	114.19	0.82281	114.17	113.49	114.32	-0.024452					41	26	2	0	0	0	0.86698	1	12646	12646		28.081	2.1898	1	90559	+		48703	28495	32701	32714	55015	55015					0.12721661939372098
RKSPFIKLPN	10	Unmodified	_RKSPFIKLPN_					0	0	0			REV__ENST00000542274.5_1_16:68679206-68732300:+|nuORF	REV__ENST00000542274.5_1_16:68679206-68732300:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	400.580152	1198.71863	2.7173	0.0010885	-1.7826	-0.00071408	0.93471	0.00037443	400.5792998697629	114.19	0.82281	114.17	113.49	114.32	-0.024452	0	0	NaN	28.081	41	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90559	+		48704	28495	32701	32714							0.12721661939372098
RKSRGAQIH	9	Unmodified	_RKSRGAQIH_					0	0	0			REV__ENST00000415807.6_1_3:172046791-172048336:+|nuORF	REV__ENST00000415807.6_1_3:172046791-172048336:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.8075561523438	2	526.807231	1051.59991	-0.037043	-1.9515E-05	1.6124	0.00084942	1.5753	0.0008299	526.8079411043393	101.16	2.0772	101.19	100.26	102.33	0.031029					128	48	4	0	0	0	0.41566	1	10834	10834		56.721	1.9447	1	2562600	+		48705	26424	32702	32715	55016	55016					0.07617307754389913
RKSRPTPQ	8	Unmodified	_RKSRPTPQ_					0	0	0			REV__ENST00000359920.10_1_19:7506854-7506917:+|nuORF	REV__ENST00000359920.10_1_19:7506854-7506917:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2865295410156	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.093	1	71.223	70.723	71.723	0.12965								0	0	0	0.29315	1	6472	6472		31.53	1.0262	1		+		48706	25465	32703	32716	55017	55017					0.06602814114467037
RKSRVVDLNL	10	Unmodified	_RKSRVVDLNL_					0	0	0		nc|ENSG00000145431|Q9NRA1-4|PDGFC;ENST00000506880.5_3_4:157684244-157699382:-|nuORF;nc|ENSG00000145431|Q9NRA1-2|PDGFC;ENSG00000145431|ENST00000502773|PDGFC	nc|ENSG00000145431|Q9NRA1-4|PDGFC	nc|ENSG00000145431|Q9NRA1-4|PDGFC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.58026123046875	3	400.578811	1198.7146	3.4037	0.0013634	1.0118	0.0004053	4.4155	0.0017688	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.85441	1	13700	13700		20.837	0	1	5321000			48707	4771	32704	32717	55018	55018					0.12319572445676386
RKSSKIFF	8	Unmodified	_RKSSKIFF_					0	0	0			REV__ENST00000498257.5_1_6:129811877-129812174:+|nuORF	REV__ENST00000498257.5_1_6:129811877-129812174:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7996520996094	2	506.800552	1011.58655	-1.5095	-0.000765	2.422	0.0012274	0.91248	0.00046244	506.8017338500082	46.598	2.104	46.598	45.336	47.44	0					97	57	2	0	0	0	0.87479	1	3411	3411		30.504	0	1	294110	+		48708	27786	32705	32718	55019	55019					0.0812205692243424
RKSSKIFF	8	Unmodified	_RKSSKIFF_					0	0	0			REV__ENST00000498257.5_1_6:129811877-129812174:+|nuORF	REV__ENST00000498257.5_1_6:129811877-129812174:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.7998046875	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.148	1	43.153	42.653	43.653	0.0057487								0	0	0	0.30252	1	2953	2953		19.36	0	1		+		48709	27786	32705	32718	55020	55020					0.0812205692243424
RKSSKIFF	8	Unmodified	_RKSSKIFF_					0	0	0			REV__ENST00000498257.5_1_6:129811877-129812174:+|nuORF	REV__ENST00000498257.5_1_6:129811877-129812174:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8024597167969	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.884	1	3286	3286		33.516	0	1	412810	+		48710	27786	32705	32718	55021	55021					0.0812205692243424
RKSSKIFF	8	Unmodified	_RKSSKIFF_					0	0	0			REV__ENST00000498257.5_1_6:129811877-129812174:+|nuORF	REV__ENST00000498257.5_1_6:129811877-129812174:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8009338378906	2	506.800552	1011.58655	0.38439	0.00019481	0.96921	0.00049119	1.3536	0.000686	506.80097431464225	53.444	1.0595	53.515	53.221	54.281	0.070709					58	27	3	0	0	0	0.92457	1	4401	4401		47.916	9.1095	1	177670	+		48711	27786	32705	32718	55022	55022					0.0812205692243424
RKSSLTRHCR	10	Unmodified	_RKSSLTRHCR_					0	0	0		ENSG00000213799|ENST00000458035|ZNF845	ENSG00000213799|ENST00000458035|ZNF845	ENSG00000213799|ENST00000458035|ZNF845	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	622.3463134765625	2	622.343655	1242.67276	0.8786	0.00054679	4.4814	0.002789	5.36	0.0033357	622.346539275879	95.975	2.7711	96.138	95.071	97.843	0.16317					131	65	3	0	0	0	0.86802	1	9838	9838		27.047	0.3544	1	486240			48712	8602	32706	32719	55023	55023					0.0611269348546557
RKSVRRGRKP	10	Unmodified	_RKSVRRGRKP_					0	0	0		nc|ENSG00000139218|Q99590-2|SCAF11;ENSG00000139218|ENST00000369367|SCAF11	nc|ENSG00000139218|Q99590-2|SCAF11	nc|ENSG00000139218|Q99590-2|SCAF11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.9326477050781	3	413.933811	1238.7796	-1.8356	-0.0007598	-1.0088	-0.00041756	-2.8443	-0.0011774	413.93335322974514	43.048	2.0933	43.048	42.061	44.154	0					130	51	3	0	0	0	0.86409	1	3016	3016		25.126	4.0938	1	494810			48713	4356	32707	32720	55024	55024					0.16976611762174798
RKTAKLMF	8	Unmodified	_RKTAKLMF_					0	0	0		ENST00000494203.1_1_2:64333384-64335477:-|nuORF;ENST00000466177.6_1_2:64327629-64335477:-|nuORF	ENST00000494203.1_1_2:64333384-64335477:-|nuORF	ENST00000494203.1_1_2:64333384-64335477:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.7949523925781	2	497.796955	993.579357	0.10323	5.1388E-05	-2.4116	-0.0012005	-2.3084	-0.0011491	497.7955420598114	48.958	1.1928	48.952	48.605	49.798	-0.0056381					56	26	3	0	0	0	0.87479	1	4107	4107		30.504	3.7075	1	455850			48714	12125	32708	32721	55025	55025					0.0823100105035337
RKTAPLPSAS	10	Unmodified	_RKTAPLPSAS_					0	0	0			REV__ENST00000509378.1_1_4:165110937-165111516:+|nuORF	REV__ENST00000509378.1_1_4:165110937-165111516:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	514.2977905273438	2	514.298373	1026.58219	-0.29361	-0.00015101	-0.83044	-0.00042709	-1.1241	-0.0005781	514.298462804293	96.228	2.3462	96.459	94.984	97.33	0.23103					132	55	3	0	0	0	0.86718	1	9919	9919		27.882	3.6795	1	616300	+		48715	27939	32709	32722	55026	55026					0.06996547708831713
RKTFYKFG	8	Unmodified	_RKTFYKFG_					0	0	0			REV__ENSG00000130940|ENST00000377022|CASZ1	REV__ENSG00000130940|ENST00000377022|CASZ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7936401367188	2	523.792727	1045.5709	1.1929	0.00062481	1.036	0.00054262	2.2288	0.0011674	523.7931742755334	19.706	1.4854	19.236	18.928	20.414	-0.46967					77	32	3	0	0	0	0.87064	1	571	571		29.15	3.6994	1	1002100	+		48716	18921	32710	32723	55027	55027					0.049937704053718335
RKTIFILPHL	10	Unmodified	_RKTIFILPHL_					0	0	0		ENST00000401000.8_1_1:150446088-150446325:+|nuORF	ENST00000401000.8_1_1:150446088-150446325:+|nuORF	ENST00000401000.8_1_1:150446088-150446325:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26580810546875	3	413.264164	1236.77066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.114	1	47.152	46.652	47.652	0.038181								0	0	0	0.45132	1	3506	3506		21.686	1.6553	1				48717	11231	32711	32724	55028	55028					0.16174825353141387
RKTKGSGV	8	Unmodified	_RKTKGSGV_					0	0	0		ENST00000519308.1_1_9:5114002-5114779:+|nuORF	ENST00000519308.1_1_9:5114002-5114779:+|nuORF	ENST00000519308.1_1_9:5114002-5114779:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.75506591796875	2	416.753601	831.49265	0.047442	1.9772E-05	3.6834	0.0015351	3.7309	0.0015549	416.7550156148421	65.976	1.6616	66.528	65.948	67.61	0.5526					110	49	3	0	0	0	0.87479	1	7208	7208		30.504	0	1	3875200			48718	13133	32712	32725	55029	55029					0.07016337820141416
RKTKKFFG	8	Unmodified	_RKTKKFFG_					0	0	0			REV__nc|ENSG00000125037|Q9P0I2-2|EMC3	REV__nc|ENSG00000125037|Q9P0I2-2|EMC3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30755615234375	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.842	1	61.961	61.461	62.461	0.11901								0	0	0	0.29755	1	5384	5384		24.203	1.1603	1		+		48719	18624	32713	32726	55030	55030					0.09765763159327889
RKTKRKKR	8	Unmodified	_RKTKRKKR_					0	0	0		chrX:130412282-130412361|16|42.38|0.1|8.71|+|0|None,RBMX2|2	chrX:130412282-130412361|16|42.38|0.1|8.71|+|0|None,RBMX2|2	chrX:130412282-130412361|16|42.38|0.1|8.71|+|0|None,RBMX2|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.8798217773438	2	550.877991	1099.74143	3.4101	0.0018786	-1.1735	-0.00064648	2.2366	0.0012321	550.8772112738451	108.99	0.56081	108.96	108.67	109.23	-0.029381					52	22	3	0	0	0	0.85277	1	12109	12109		25.45	0	1	2297500			48720	541	32714	32727	55031	55031					0.19554725847501686
RKTKRKKR	8	Unmodified	_RKTKRKKR_					0	0	0		chrX:130412282-130412361|16|42.38|0.1|8.71|+|0|None,RBMX2|2	chrX:130412282-130412361|16|42.38|0.1|8.71|+|0|None,RBMX2|2	chrX:130412282-130412361|16|42.38|0.1|8.71|+|0|None,RBMX2|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.8786010742188	2	550.877991	1099.74143	1.2771	0.00070354	1.054	0.00058064	2.3312	0.0012842	550.8784430359498	108.9	0.52892	108.94	108.73	109.25	0.034355					60	25	3	0	0	0	0.8347	1	11973	11973		23.042	4.7181	1	2842700			48721	541	32714	32727	55032	55032					0.19554725847501686
RKTNKSRGFA	10	Unmodified	_RKTNKSRGFA_					0	0	0		ENSG00000175718|ENST00000424776|RBMXL3	ENSG00000175718|ENST00000424776|RBMXL3	ENSG00000175718|ENST00000424776|RBMXL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	583.3329467773438	2	582.833446	1163.65234	-0.40613	-0.0002367	-0.9644	-0.00056209	-1.3705	-0.00079879	582.832911894326	94.456	2.7605	94.456	93.622	96.382	0					111	64	3	0	0	0	0.8651	1	9385	9385		25.574	1.0549	1	367730			48722	7031	32715	32728	55033	55033					0.07705846097337599
RKTPAPAC	8	Unmodified	_RKTPAPAC_					0	0	0		ENST00000420010.6_1_16:84440201-84449139:+|nuORF	ENST00000420010.6_1_16:84440201-84449139:+|nuORF	ENST00000420010.6_1_16:84440201-84449139:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2280578613281	2	422.228905	842.443257	-1.5227	-0.00064292	-0.47201	-0.0001993	-1.9947	-0.00084222	422.2286072039903	64.658	1.0335	64.658	64.292	65.325	0					111	47	3	0	0	0	0.87922	1	5706	5706		31.955	0	1	501820			48723	11443	32716	32729	55034	55034					0.015733065396716484
RKTPLRPPPV	10	Unmodified	_RKTPLRPPPV_					0	0	0			REV__ENSG00000160224|ENST00000291582|AIRE	REV__ENSG00000160224|ENST00000291582|AIRE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8663940429688	2	580.866757	1159.71896	-1.8878	-0.0010966	0.45517	0.00026439	-1.4326	-0.00083216	580.8667247469302	62.592	1.1317	62.98	62.183	63.315	0.38779					63	25	4	0	0	0	0.5766	1	6686	6686		51.335	12.083	1	930800	+		48724	20705	32717	32730	55035	55035					0.14549081659220064
RKTRVEAVPR	10	Unmodified	_RKTRVEAVPR_					0	0	0			REV__ENST00000492555.5_1_3:52568505-52568682:-|nuORF	REV__ENST00000492555.5_1_3:52568505-52568682:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	606.3690795898438	2	606.370195	1210.72584	0.84903	0.00051483	-1.9782	-0.0011995	-1.1292	-0.00068469	606.3688643769136	94.076	3.4223	94.237	93.324	96.746	0.16118					202	81	3	0	0	0	0.86272	1	9639	9639		24.519	0	1	934800	+		48725	27676	32718	32731	55036	55036					0.12890394539772387
RKTSASGLVN	10	Unmodified	_RKTSASGLVN_					0	0	0		ENST00000424774.1_1_1:16481822-16481975:+|nuORF	ENST00000424774.1_1_1:16481822-16481975:+|nuORF	ENST00000424774.1_1_1:16481822-16481975:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.793701171875	2	516.793455	1031.57236	-1.5587	-0.00080555	1.5478	0.00079991	-0.010905	-5.6357E-06	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.82886	1	8731	8731		37.812	7.4938	1	755180			48726	11521	32719	32732	55037	55037					0.057833597034687045
RKTSMETIKW	10	Unmodified	_RKTSMETIKW_					0	0	0			REV__ENSG00000178177|ENST00000635767|LCORL	REV__ENSG00000178177|ENST00000635767|LCORL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3449096679688	2	640.344997	1278.67544	1.6035	0.0010268	0.89377	0.00057232	2.4973	0.0015991	640.345537292935	102.92	0.5733	102.96	102.71	103.28	0.04319					45	13	4	0	0	0	0.57924	1	11182	11182		51.193	9.7661	1	2983300	+		48727	22262	32720	32733	55038	55038					0.047251040997707605
RKTVESKEL	9	Unmodified	_RKTVESKEL_					0	0	0			REV__ENSG00000189108|ENST00000372582|IL1RAPL2	REV__ENSG00000189108|ENST00000372582|IL1RAPL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3169555664062	2	545.316763	1088.61897	1.2602	0.00068721	-1.6244	-0.00088579	-0.36416	-0.00019858	545.3157252215916	93.374	2.1704	93.419	93.078	95.248	0.045448					107	51	4	0	0	0	0.78912	1	9867	9867		28.081	0.19925	1	955570	+		48728	23065	32721	32734	55039	55039					0.07820799534761136
RKVAALRQRQQ	11	Unmodified	_RKVAALRQRQQ_					0	0	0			REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31	REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.946044921875	3	451.944376	1352.8113	-1.2917	-0.0005838	-1.0632	-0.0004805	-2.3549	-0.0010643	451.94377054874303	55.311	1.3656	55.375	54.704	56.07	0.063725					141	47	4	0	0	0	0.74405	1	4541	4541		23.378	0	1	457030	+		48729	20506	32722	32735	55040	55040					0.14900559725469975
RKVAGKVEN	9	Unmodified	_RKVAGKVEN_					0	0	0			REV__ENSG00000179919|ENST00000326258|OR10A7	REV__ENSG00000179919|ENST00000326258|OR10A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.798095703125	2	500.79854	999.582528	-0.20548	-0.00010291	0.93558	0.00046854	0.7301	0.00036563	500.79776973299846	94.355	2.1278	94.402	93.492	95.62	0.046173					87	50	4	0	0	0	0.78058	1	9914	9914		30.504	0	1	522090	+		48730	22365	32723	32736	55041	55041					0.08271967428709104
RKVEQNTP	8	Unmodified	_RKVEQNTP_					0	0	0			REV__ENSG00000115183|ENST00000263635|TANC1	REV__ENSG00000115183|ENST00000263635|TANC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.26690673828125	2	486.267073	970.519593	-0.72648	-0.00035326	0.90847	0.00044176	0.182	8.8499E-05	486.2674012957117	86.085	5.1254	86.27	85.016	90.141	0.18522					327	120	4	0	0	0	0.87479	1	8648	8648		30.504	0	1	1830000	+		48731	18091	32724	32737	55042	55042					0.03315401640657001
RKVFVGGL	8	Unmodified	_RKVFVGGL_					0	0	0		nc|ENSG00000107864|Q8NE35-2|CPEB3;ENSG00000107864|ENST00000265997|CPEB3;nc|ENSG00000113742|Q17RY0-3|CPEB4;nc|ENSG00000137449|Q7Z5Q1-7|CPEB2;nc|ENSG00000137449|Q7Z5Q1-5|CPEB2;nc|ENSG00000137449|Q7Z5Q1-4|CPEB2;nc|ENSG00000137449|Q7Z5Q1-6|CPEB2;nc|ENSG00000137449|Q7Z5Q1-3|CPEB2;nc|ENSG00000137449|Q7Z5Q1|CPEB2;nc|ENSG00000113742|Q17RY0-2|CPEB4;ENSG00000113742|ENST00000265085|CPEB4;nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;ENSG00000137449|ENST00000538197|CPEB2	nc|ENSG00000107864|Q8NE35-2|CPEB3	nc|ENSG00000107864|Q8NE35-2|CPEB3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26324462890625	2	438.276712	874.538872	0.054814	2.4024E-05	-2.129	-0.00093311	-2.0742	-0.00090909	438.2756181988518	35.461	0.24435	35.4	35.32	35.564	-0.060333					12	6	2	0	0	0	0.4196	1	1888	1888		37.028	11.578	1	120740			48732	2377	32725	32738	55043	55043					0.09658402722243409
RKVFVGGL	8	Unmodified	_RKVFVGGL_					0	0	0		nc|ENSG00000107864|Q8NE35-2|CPEB3;ENSG00000107864|ENST00000265997|CPEB3;nc|ENSG00000113742|Q17RY0-3|CPEB4;nc|ENSG00000137449|Q7Z5Q1-7|CPEB2;nc|ENSG00000137449|Q7Z5Q1-5|CPEB2;nc|ENSG00000137449|Q7Z5Q1-4|CPEB2;nc|ENSG00000137449|Q7Z5Q1-6|CPEB2;nc|ENSG00000137449|Q7Z5Q1-3|CPEB2;nc|ENSG00000137449|Q7Z5Q1|CPEB2;nc|ENSG00000113742|Q17RY0-2|CPEB4;ENSG00000113742|ENST00000265085|CPEB4;nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;ENSG00000137449|ENST00000538197|CPEB2	nc|ENSG00000107864|Q8NE35-2|CPEB3	nc|ENSG00000107864|Q8NE35-2|CPEB3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26220703125	2	438.276712	874.538872	-2.4845	-0.0010889	-0.3532	-0.0001548	-2.8377	-0.0012437	438.2768576697378	41.114	0.58606	41.506	40.935	41.521	0.39209					23	16	2	0	0	0	0.4196	1	3553	3553		28.254	2.8041	1	2211500			48733	2377	32725	32738	55044	55044					0.09658402722243409
RKVICIPK	8	Unmodified	_RKVICIPK_					0	0	0		ENST00000487654.5_1_1:46033819-46034819:+|nuORF;ENSG00000117448|ENST00000351829|AKR1A1;ENST00000473038.5_1_1:46033610-46035625:+|nuORF	ENST00000487654.5_1_1:46033819-46034819:+|nuORF	ENST00000487654.5_1_1:46033819-46034819:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80548095703125	2	478.807322	955.600092	0.18646	8.928E-05	-3.0807	-0.001475	-2.8942	-0.0013858	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.87922	1	2855	2855		31.955	6.5047	1	371600			48734	2979	32726	32739	55045	55045					0.12051591430008557
RKVICIPK	8	Unmodified	_RKVICIPK_					0	0	0		ENST00000487654.5_1_1:46033819-46034819:+|nuORF;ENSG00000117448|ENST00000351829|AKR1A1;ENST00000473038.5_1_1:46033610-46035625:+|nuORF	ENST00000487654.5_1_1:46033819-46034819:+|nuORF	ENST00000487654.5_1_1:46033819-46034819:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.80560302734375	2	478.807322	955.600092	-1.2024	-0.0005757	-0.89347	-0.0004278	-2.0958	-0.0010035	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.87922	1	2693	2693		31.955	2.8053	1	361300			48735	2979	32726	32739	55046	55046					0.12051591430008557
RKVICIPK	8	Unmodified	_RKVICIPK_					0	0	0		ENST00000487654.5_1_1:46033819-46034819:+|nuORF;ENSG00000117448|ENST00000351829|AKR1A1;ENST00000473038.5_1_1:46033610-46035625:+|nuORF	ENST00000487654.5_1_1:46033819-46034819:+|nuORF	ENST00000487654.5_1_1:46033819-46034819:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.80401611328125	2	478.807322	955.600092	-1.0213	-0.00048898	-2.9417	-0.0014085	-3.963	-0.0018975	478.80577246421075	40.154	1.6745	40.522	39.134	40.808	0.36797					102	40	4	0	0	0	0.79929	1	3399	3399		18.324	0.95945	1	2523100			48736	2979	32726	32739	55047	55047					0.12051591430008557
RKVIDRLLVQ	10	Unmodified	_RKVIDRLLVQ_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.93218994140625	3	413.934706	1238.78229	-1.7284	-0.00071544	-3.4466	-0.0014267	-5.175	-0.0021421	413.9331861748567	42.059	0.84296	42.757	42.456	43.299	0.69754					54	20	3	0	0	0	0.8573	1	3742	3742		16.007	0.67366	1	1111600	+		48737	23196	32727	32740	55048	55048					0.1724502237645993
RKVIKNSPLP	10	Unmodified	_RKVIKNSPLP_					0	0	0			REV__ENSG00000133328|ENST00000255695|PLAAT2	REV__ENSG00000133328|ENST00000255695|PLAAT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	576.86767578125	2	576.36659	1150.71863	-0.95493	-0.00055039	4.4007	0.0025364	3.4458	0.001986	576.3689207411744	41.362	1.2441	41.321	40.856	42.1	-0.04081					57	32	2	0	0	0	0.85251	1	3097	3097		19.997	0	1	219690	+		48738	19075	32728	32741	55049	55049					0.14929661939368088
RKVIKNSPLP	10	Unmodified	_RKVIKNSPLP_					0	0	0			REV__ENSG00000133328|ENST00000255695|PLAAT2	REV__ENSG00000133328|ENST00000255695|PLAAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3679809570312	2	576.36659	1150.71863	0.35965	0.00020729	3.6137	0.0020828	3.9734	0.0022901	576.3684427135254	43.121	1.8301	43.178	42.557	44.387	0.056744					99	45	3	0	0	0	0.86763	1	2978	2978		26.693	1.1189	1	329330	+		48739	19075	32728	32741	55050	55050					0.14929661939368088
RKVIKNSPLP	10	Unmodified	_RKVIKNSPLP_					0	0	0			REV__ENSG00000133328|ENST00000255695|PLAAT2	REV__ENSG00000133328|ENST00000255695|PLAAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3689575195312	2	576.36659	1150.71863	0.36118	0.00020817	4.4471	0.0025631	4.8082	0.0027713	576.3690085595338	39.41	1.5229	39.358	38.775	40.298	-0.052727					87	42	3	0	0	0	0.8651	1	2403	2403		25.574	4.6271	1	289570	+		48740	19075	32728	32741	55051	55051					0.14929661939368088
RKVILFTFK	9	Unmodified	_RKVILFTFK_					0	0	0		ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3658447265625	2	576.368601	1150.72265	-1.8889	-0.0010887	1.4195	0.00081817	-0.46939	-0.00027054	576.3692460621713	40.332	1.1916	40.921	40.26	41.451	0.58915					99	31	4	0	0	0	0.67345	1	3431	3431		42.396	16.822	1	6057000			48741	10564	32729	32742	55052	55052					0.15331751433109275
RKVILFTFK	9	Unmodified	_RKVILFTFK_					0	0	0		ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3698120117188	2	576.368601	1150.72265	-2.0469	-0.0011797	1.8422	0.0010618	-0.20464	-0.00011795	576.369506794978	41.409	1.2071	42.043	41.461	42.668	0.6339					86	32	3	0	0	0	0.55097	1	3635	3635		49.442	15.269	1	2070900			48742	10564	32729	32742	55053	55053					0.15331751433109275
RKVILFTFK	9	Unmodified	_RKVILFTFK_					0	0	0		ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	576.368601	1150.72265	-1.2036	-0.0006937	1.9763	0.0011391	0.7727	0.00044536	576.3695618440737	42.057	1.0728	42.057	41.642	42.715	0	0.041198	0.00068807	NaN	49.442	60	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181890			48743	10564	32729	32742							0.15331751433109275
RKVKKGLR	8	Unmodified	_RKVKKGLR_					0	0	0			REV__ENSG00000162998|ENST00000295113|FRZB	REV__ENSG00000162998|ENST00000295113|FRZB	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.8442077636719	2	492.843085	983.671617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.54	1	118.6	118.1	119.1	0.060577								0	0	0	0.30884	1	12471	12471		13.775	4.953	1		+		48744	20871	32730	32743	55054	55054					0.1791284717888857
RKVKKKHK	8	Unmodified	_RKVKKKHK_					0	0	0		nc|ENSG00000153132|O14967-2|CLGN;ENSG00000153132|ENST00000325617|CLGN	nc|ENSG00000153132|O14967-2|CLGN	nc|ENSG00000153132|O14967-2|CLGN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3610229492188	2	526.364185	1050.71382	-1.5923	-0.00083811	-4.4023	-0.0023172	-5.9946	-0.0031553	526.3617428180578	33.41	1.543	33.41	33.111	34.654	0					182	44	5	0	0	0	0.85277	5	1734	1698;1714;1734;1775;1798		40.573	15.122	1	7280900			48745	5215	32731	32744	55055;55056;55057;55058;55059	55057					0.19048822587274117
RKVKKKHK	8	Unmodified	_RKVKKKHK_					0	0	0		nc|ENSG00000153132|O14967-2|CLGN;ENSG00000153132|ENST00000325617|CLGN	nc|ENSG00000153132|O14967-2|CLGN	nc|ENSG00000153132|O14967-2|CLGN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3610229492188	2	526.364185	1050.71382	-1.5676	-0.00082514	-4.2159	-0.0022191	-5.7835	-0.0030442	526.3617973555264	35.031	1.6441	35.031	34.615	36.259	0					148	43	4	0	0	0	0.86288	3	1940	1930;1940;1980		40.573	14.156	1	1307600			48746	5215	32731	32744	55060;55061;55062	55061					0.19048822587274117
RKVKKKHK	8	Unmodified	_RKVKKKHK_					0	0	0		nc|ENSG00000153132|O14967-2|CLGN;ENSG00000153132|ENST00000325617|CLGN	nc|ENSG00000153132|O14967-2|CLGN	nc|ENSG00000153132|O14967-2|CLGN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3601684570312	2	526.364185	1050.71382	-1.5421	-0.00081169	-4.0982	-0.0021571	-5.6402	-0.0029688	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.80706	2	2098	2098;2205		26.796	3.7536	1	788470			48747	5215	32731	32744	55063;55064	55063					0.19048822587274117
RKVKPLPRIIA	11	Unmodified	_RKVKPLPRIIA_					0	0	0			REV__ENSG00000138246|ENST00000260818|DNAJC13	REV__ENSG00000138246|ENST00000260818|DNAJC13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.95928955078125	3	430.962597	1289.86596	-1.1979	-0.00051624	-3.9994	-0.0017236	-5.1973	-0.0022398	430.96070559366615	40.578	1.0757	41.167	40.797	41.872	0.58915					92	30	5	0	0	0	0.8498	1	3507	3507		6.001	0.30226	1	17366000	+		48748	19452	32732	32745	55065	55065					0.23262178544177914
RKVKPSPLQV	10	Unmodified	_RKVKPSPLQV_					0	0	0			REV__ENST00000541244.1_1_12:123560352-123560463:-|nuORF	REV__ENST00000541244.1_1_12:123560352-123560463:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3682861328125	2	576.36659	1150.71863	0.53296	0.00030718	4.1039	0.0023653	4.6368	0.0026725	576.3687776976809	46.453	1.6617	46.469	45.398	47.06	0.015514					107	45	3	0	0	0	0.85251	1	3432	3432		19.997	1.7347	1	233880	+		48749	28480	32733	32746	55066	55066					0.14929661939368088
RKVKPSPLQV	10	Unmodified	_RKVKPSPLQV_					0	0	0			REV__ENST00000541244.1_1_12:123560352-123560463:-|nuORF	REV__ENST00000541244.1_1_12:123560352-123560463:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.368896484375	2	576.36659	1150.71863	0.43776	0.00025231	4.3476	0.0025058	4.7853	0.0027581	576.3689389740499	51.813	1.6149	51.873	51.457	53.072	0.059719					109	50	3	0	0	0	0.85834	1	4142	4142		22.58	4.2552	1	237350	+		48750	28480	32733	32746	55067	55067					0.14929661939368088
RKVKPSPLQV	10	Unmodified	_RKVKPSPLQV_					0	0	0			REV__ENST00000541244.1_1_12:123560352-123560463:-|nuORF	REV__ENST00000541244.1_1_12:123560352-123560463:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	576.36659	1150.71863	-0.39274	-0.00022636	4.987	0.0028743	4.5943	0.002648	576.3693555845607	52.201	3.3944	52.177	51.368	54.763	-0.023849	0.14146	0.00019984	NaN	22.58	159	87	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125970	+		48751	28480	32733	32746							0.14929661939368088
RKVKPSPLQV	10	Unmodified	_RKVKPSPLQV_					0	0	0			REV__ENST00000541244.1_1_12:123560352-123560463:-|nuORF	REV__ENST00000541244.1_1_12:123560352-123560463:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	576.36659	1150.71863	0.43776	0.00025231	4.3476	0.0025058	4.7853	0.0027581	576.3689389740499	51.813	1.6149	51.873	51.457	53.072	0.059719	-0.16282	-0.00053726	NaN	22.58	109	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	237350	+		48752	28480	32733	32746							0.14929661939368088
RKVKPSPLQV	10	Unmodified	_RKVKPSPLQV_					0	0	0			REV__ENST00000541244.1_1_12:123560352-123560463:-|nuORF	REV__ENST00000541244.1_1_12:123560352-123560463:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	576.36659	1150.71863	-0.092746	-5.3456E-05	5.0834	0.0029299	4.9907	0.0028765	576.3693517866177	52.132	1.9893	52.057	51.354	53.344	-0.074512	0.021358	0.000311	NaN	22.58	111	60	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	236170	+		48753	28480	32733	32746							0.14929661939368088
RKVKQEQP	8	Unmodified	_RKVKQEQP_					0	0	0			REV__chr6:70163396-70165941|13|26.0|0.6|5.44|+|1|COL19A1,COL19A1|1	REV__chr6:70163396-70165941|13|26.0|0.6|5.44|+|1|COL19A1,COL19A1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8006896972656	2	506.79854	1011.58253	0.2762	0.00013998	4.2956	0.002177	4.5718	0.002317	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.89043	1	3608	3608		35.618	8.9254	1	416790	+		48754	15887	32734	32747	55068	55068					0.0771996742871579
RKVKREEMTK	10	Unmodified	_RKVKREEMTK_					0	0	0			REV__nc|ENSG00000024862|Q8IWP9|CCDC28A	REV__nc|ENSG00000024862|Q8IWP9|CCDC28A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.9180603027344	3	435.587089	1303.73944	-0.25141	-0.00010951	-1.7277	-0.00075254	-1.9791	-0.00086205	435.5862152580201	26.43	0.94317	26.173	25.901	26.844	-0.2572					27	20	2	0	0	0	0.37624	1	1500	1500		10.587	0	1	93343	+		48755	29679	32735	32748	55069	55069					0.09971884256697194
RKVKSKGTG	9	Unmodified	_RKVKSKGTG_					0	0	0			REV__ENST00000467566.1_1_2:109065703-109066163:+|nuORF	REV__ENST00000467566.1_1_2:109065703-109066163:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.801513671875	2	480.801083	959.587613	1.8221	0.00087609	-1.8297	-0.00087971	-0.0075387	-3.6246E-06	480.8000859655465	94.893	2.2797	95.326	94.801	97.081	0.4324					179	54	5	0	0	0	0.7932	1	11292	11292		25.574	1.07	1	7713500	+		48756	27160	32736	32749	55070	55070					0.10620271291350036
RKVLLGAL	8	Unmodified	_RKVLLGAL_					0	0	0		ENST00000503671.2_1_4:110737056-110740318:+|nuORF	ENST00000503671.2_1_4:110737056-110740318:+|nuORF	ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.29998779296875	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.85228	1	6402	6402		10.185	0	1	1072400			48757	12889	32737	32750	55071	55071					0.14627262273381803
RKVLLGAL	8	Unmodified	_RKVLLGAL_					0	0	0		ENST00000503671.2_1_4:110737056-110740318:+|nuORF	ENST00000503671.2_1_4:110737056-110740318:+|nuORF	ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3004455566406	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.80963	2	7188	6830;7188		15.636	0	1	1680500			48758	12889	32737	32750	55072;55073	55073					0.14627262273381803
RKVLLGAL	8	Unmodified	_RKVLLGAL_					0	0	0		ENST00000503671.2_1_4:110737056-110740318:+|nuORF	ENST00000503671.2_1_4:110737056-110740318:+|nuORF	ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.30010986328125	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.85787	1	7171	7171		9.4706	0	1	1702600			48759	12889	32737	32750	55074	55074					0.14627262273381803
RKVLLGAL	8	Unmodified	_RKVLLGAL_					0	0	0		ENST00000503671.2_1_4:110737056-110740318:+|nuORF	ENST00000503671.2_1_4:110737056-110740318:+|nuORF	ENST00000503671.2_1_4:110737056-110740318:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3002624511719	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.82419	1	6481	6481		13.775	0	1	2081500			48760	12889	32737	32750	55075	55075					0.14627262273381803
RKVMAMLVL	9	Unmodified	_RKVMAMLVL_					0	0	0			REV__nc|ENSG00000211751|P01850|TRBC1	REV__nc|ENSG00000211751|P01850|TRBC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.821044921875	2	530.822115	1059.62968	-0.88248	-0.00046844	-1.0002	-0.00053093	-1.8827	-0.00099937	530.821384723199	80.761	1.5978	80.761	80.141	81.738	0					159	57	4	0	0	0	0.77546	1	7486	7486		31.955	0	1	2196600	+		48761	30185	32738	32751	55076	55076					0.10224787383822331
RKVNGKIE	8	Unmodified	_RKVNGKIE_					0	0	0			REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	REV__nc|ENSG00000163092|A4UGR9-2|XIRP2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2882995605469	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.46	1	116.44	115.94	116.94	-0.02433								0	0	0	0.29344	1	12897	12897		31.955	0.42505	1		+		48762	20880	32739	32752	55077	55077					0.0874858239999412
RKVPWYVL	8	Unmodified	_RKVPWYVL_					0	0	0		ENST00000588524.5_1_19:11687529-11687667:-|nuORF;ENSG00000102575|ENST00000648477|ACP5	ENST00000588524.5_1_19:11687529-11687667:-|nuORF	ENST00000588524.5_1_19:11687529-11687667:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.8207397460938	2	530.818744	1059.62294	-0.034622	-1.8378E-05	4.0917	0.002172	4.0571	0.0021536	530.820933749492	80.358	1.1642	80.42	79.976	81.14	0.062225					91	34	3	0	0	0	0.86791	2	7885	7885;7895		35.201	2.3883	1	600980			48763	2010	32740	32753	55078;55079	55078					0.09550933819127749
RKVPWYVL	8	Unmodified	_RKVPWYVL_					0	0	0		ENST00000588524.5_1_19:11687529-11687667:-|nuORF;ENSG00000102575|ENST00000648477|ACP5	ENST00000588524.5_1_19:11687529-11687667:-|nuORF	ENST00000588524.5_1_19:11687529-11687667:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.8201293945312	2	530.818744	1059.62294	0.64608	0.00034295	3.3079	0.0017559	3.954	0.0020988	530.820506018963	80.205	1.3856	80.261	79.781	81.166	0.055916					85	34	3	0	0	0	0.86288	1	7960	7960		26.796	2.5934	1	627060			48764	2010	32740	32753	55080	55080					0.09550933819127749
RKVPWYVL	8	Unmodified	_RKVPWYVL_					0	0	0		ENST00000588524.5_1_19:11687529-11687667:-|nuORF;ENSG00000102575|ENST00000648477|ACP5	ENST00000588524.5_1_19:11687529-11687667:-|nuORF	ENST00000588524.5_1_19:11687529-11687667:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8208618164062	2	530.818744	1059.62294	0.64668	0.00034327	3.4627	0.0018381	4.1094	0.0021813	530.8205589668217	80.04	1.1775	80.181	79.815	80.992	0.14118					115	43	3	0	0	0	0.86791	1	7672	7672		28.254	0.37203	1	892800			48765	2010	32740	32753	55081	55081					0.09550933819127749
RKVRHVST	8	Unmodified	_RKVRHVST_					0	0	0		ENSG00000204839|ENST00000398882|MROH6	ENSG00000204839|ENST00000398882|MROH6	ENSG00000204839|ENST00000398882|MROH6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7962646484375	2	491.798875	981.583196	-1.796	-0.00088329	-4.3545	-0.0021416	-6.1506	-0.0030248	491.7966581870457	51.567	1.6539	51.579	50.697	52.351	0.012436					117	46	3	0	0	0	0.85277	1	4505	4505		25.45	3.4903	1	354980			48766	8488	32741	32754	55082	55082					0.09166806868415733
RKVSLFGKR	9	Unmodified	_RKVSLFGKR_					0	0	0		ENSG00000080986|ENST00000261597|NDC80	ENSG00000080986|ENST00000261597|NDC80	ENSG00000080986|ENST00000261597|NDC80	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.8477783203125	2	545.845825	1089.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.48	1	116.41	115.91	116.91	-0.074318								0	0	0	0.36148	1	12517	12517		11.511	0.64546	1				48767	1456	32742	32755	55083	55083					0.13584525970713912
RKVTEFPF	8	Unmodified	_RKVTEFPF_					0	0	0			REV__ENST00000488158.5_1_X:118533366-118560222:+|nuORF	REV__ENST00000488158.5_1_X:118533366-118560222:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2805786132812	2	512.284734	1022.55492	-0.82606	-0.00042318	-3.0568	-0.001566	-3.8829	-0.0019891	512.2830036162308	34.015	0.59412	34.018	33.833	34.427	0.0026054					21	12	2	0	0	0	0.85277	1	2044	2044		25.45	2.4077	1	44458	+		48768	16753	32743	32756	55084	55084					0.044540641684761795
RKVTHESPTT	10	Unmodified	_RKVTHESPTT_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;nc|ENSG00000133243|Q9BX70-2|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3107299804688	2	578.309469	1154.60439	-0.93812	-0.00054253	2.8159	0.0016285	1.8778	0.0010859	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.8608	2	12046	11989;12046		34.173	6.0796	1	3649700			48769	3867	32744	32757	55085;55086	55086					0.033267273866158575
RKVVLFLMK	9	Unmodified	_RKVVLFLMK_					0	0	0		ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.362548828125	2	567.365004	1132.71546	-1.2185	-0.00069132	-1.4379	-0.0008158	-2.6563	-0.0015071	567.3640514854945	44.308	2.4797	44.308	43.541	46.02	0					178	60	4	0	0	0	0.7932	2	3135	3135;3179		24.203	6.8378	1	1364200			48770	12406	32745	32758	55087;55088	55087					0.15440695561005668
RKVVLFLMK	9	Unmodified	_RKVVLFLMK_					0	0	0		ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.363037109375	2	567.365004	1132.71546	-0.87429	-0.00049604	-1.7403	-0.00098738	-2.6146	-0.0014834	567.3638800486743	44.538	2.1986	44.515	43.895	46.093	-0.023079					155	51	5	0	0	0	0.7932	1	3432	3432		24.203	0	1	2273000			48771	12406	32745	32758	55089	55089					0.15440695561005668
RKVVVVVP	8	Unmodified	_RKVVVVVP_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.3076171875	2	448.308013	894.601472	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.333	1	81.273	80.773	81.773	-0.059692								0	0	0	0.29871	1	8205	8205		23.037	0	1				48772	8635	32746	32759	55090	55090					0.14995548790420798
RKVVVVVP	8	Unmodified	_RKVVVVVP_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.3077392578125	2	448.308013	894.601472	-0.81848	-0.00036693	0.83217	0.00037307	0.013688	6.1366E-06	448.30828378299327	79.858	1.6959	80.274	79.317	81.013	0.41621					76	39	2	0	0	0	0.80963	1	9154	9154		15.636	0.97212	1	808240			48773	8635	32746	32759	55091	55091					0.14995548790420798
RKVVVVVP	8	Unmodified	_RKVVVVVP_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.30792236328125	2	448.308013	894.601472	0.040774	1.8279E-05	0.012791	5.7345E-06	0.053566	2.4014E-05	448.3078723892815	79.698	1.7809	80.247	79.234	81.015	0.54945					88	41	3	0	0	0	0.81548	1	9187	9187		20.482	0	1	769040			48774	8635	32746	32759	55092	55092					0.14995548790420798
RKWEIHWAVLR	11	Unmodified	_RKWEIHWAVLR_					0	0	0		ENST00000496804.5_1_1:39734274-39734415:+|nuORF	ENST00000496804.5_1_1:39734274-39734415:+|nuORF	ENST00000496804.5_1_1:39734274-39734415:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.9580383300781	3	498.621122	1492.84154	0.8993	0.00044841	3.026	0.0015088	3.9253	0.0019572	498.62268617728625	21.451	1.1498	21.519	20.917	22.067	0.068251					65	41	2	0	0	0	0.76892	1	539	539		17.833	1.9125	1	54885			48775	12794	32747	32760	55093	55093					0.11482918390629493
RKWPSKRRIP	10	Unmodified	_RKWPSKRRIP_					0	0	0		ENSG00000167645|ENST00000339413|YIF1B	ENSG00000167645|ENST00000339413|YIF1B	ENSG00000167645|ENST00000339413|YIF1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9398498535156	3	441.942195	1322.80476	-1.4729	-0.00065094	-3.9355	-0.0017393	-5.4084	-0.0023902	441.94033054697593	56.641	1.0598	56.713	56.56	57.62	0.071835					108	50	3	0	0	0	0.85633	1	4799	4799		21.686	0.65352	1	756750			48776	6311	32748	32761	55094	55094					0.15626666564753577
RKYALLPSSSS	11	Unmodified	_RKYALLPSSSS_					0	0	0		ENSG00000157450|ENST00000348370|RNF111;nc|ENSG00000157450|Q6ZNA4|RNF111;nc|ENSG00000157450|Q6ZNA4-4|RNF111;nc|ENSG00000157450|Q6ZNA4-3|RNF111	ENSG00000157450|ENST00000348370|RNF111	ENSG00000157450|ENST00000348370|RNF111	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.5595397949219	3	403.559305	1207.65609	-0.38238	-0.00015431	2.1758	0.00087806	1.7934	0.00072374	403.56005878614496	22.792	0.9348	22.733	22.419	23.353	-0.058668					76	31	3	0	0	0	0.74405	1	781	781		23.378	0.81632	1	169720			48777	5431	32749	32762	55095	55095					0.060564710805238064
RKYFQLDVTL	10	Unmodified	_RKYFQLDVTL_					0	0	0		ENST00000432857.2_1_3:9792686-9793638:+|nuORF;nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-8|OGG1;nc|ENSG00000114026|O15527-2|OGG1;ENSG00000114026|ENST00000344629|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1	ENST00000432857.2_1_3:9792686-9793638:+|nuORF	ENST00000432857.2_1_3:9792686-9793638:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3621826171875	2	641.861338	1281.70812	1.706	0.001095	-4.3678	-0.0028035	-2.6617	-0.0017085	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.74274	1	12575	12575		42.396	4.5846	1	27133000			48778	2758	32750	32763	55096	55096					0.0785363449426768
RKYHKLGTG	9	Unmodified	_RKYHKLGTG_					0	0	0		nc|ENSG00000116641|Q96N67-7|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;ENSG00000116641|ENST00000635253|DOCK7	nc|ENSG00000116641|Q96N67-7|DOCK7	nc|ENSG00000116641|Q96N67-7|DOCK7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8106689453125	2	530.306532	1058.59851	-1.5163	-0.00080408	1.8908	0.0010027	0.37454	0.00019862	530.811105038982	98.264	1.7761	98.459	97.177	98.953	0.19585					71	40	3	0	0	0	0.78536	1	10158	10158		29.15	2.3535	1	81500			48779	2929	32751	32764	55097	55097					0.0715567366560208
RKYKCIFRIDN	11	Unmodified	_RKYKCIFRIDN_					0	0	0			REV__ENSG00000204186|ENST00000374423|ZDBF2	REV__ENSG00000204186|ENST00000374423|ZDBF2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.2857971191406	3	485.934489	1454.78164	-0.090104	-4.3785E-05	-3.4298	-0.0016667	-3.5199	-0.0017104	485.93236747716054	60.723	0.4504	60.711	60.396	60.846	-0.012199					17	11	2	0	0	0	0.17835	1	5620	5620		11.932	0	1	79864	+		48780	23469	32752	32765	55098	55098					0.0724385966511818
RKYKGISSRI	10	Unmodified	_RKYKGISSRI_					0	0	0		nc|ENSG00000122591|Q9BYI3-3|HYCC1;ENSG00000122591|ENST00000432176|HYCC1	nc|ENSG00000122591|Q9BYI3-3|HYCC1	nc|ENSG00000122591|Q9BYI3-3|HYCC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.36669921875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.8651	1	12421	12421		25.574	3.6142	1	3346600			48781	3235	32753	32766	55099	55099					0.12459876308275852
RKYNRNETYIR	11	Unmodified	_RKYNRNETYIR_					0	0	0		ENST00000474489.5_1_2:220381987-220402187:+|nuORF;nc|ENSG00000072182|Q96FT7-1|ASIC4;ENSG00000072182|ENST00000358078|ASIC4	ENST00000474489.5_1_2:220381987-220402187:+|nuORF	ENST00000474489.5_1_2:220381987-220402187:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	504.9383850097656	3	504.939179	1511.79571	-0.48501	-0.0002449	-1.795	-0.00090639	-2.2801	-0.0011513	504.9382559423754	56.501	0.77333	56.475	56.384	57.158	-0.026108					61	37	2	0	0	0	0.76892	1	4777	4777		17.833	0.6664	1	644060			48782	1270	32754	32767	55100	55100					0.060282284177446854
RKYPLLPT	8	Unmodified	_RKYPLLPT_					0	0	0		ENST00000290271.6_1_8:23701968-23702067:-|nuORF	ENST00000290271.6_1_8:23701968-23702067:-|nuORF	ENST00000290271.6_1_8:23701968-23702067:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.30426025390625	2	494.302927	986.591301	-0.93526	-0.0004623	-3.1775	-0.0015706	-4.1127	-0.0020329	494.30124312836693	18.382	0.49697	18.303	18.095	18.592	-0.078943					25	19	2	0	0	0	0.81548	1	336	336		20.482	0	1	18498			48783	9672	32755	32768	55101	55101					0.09746941065179726
RKYRNQKFK	9	Unmodified	_RKYRNQKFK_					0	0	0		ENSG00000070495|ENST00000397625|JMJD6;nc|ENSG00000070495|Q6NYC1-3|JMJD6;nc|ENSG00000070495|Q6NYC1-2|JMJD6	ENSG00000070495|ENST00000397625|JMJD6	ENSG00000070495|ENST00000397625|JMJD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3748779296875	2	634.372738	1266.73092	6.6613	0.0042258	0.060811	3.8577E-05	6.7222	0.0042644	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.7932	1	13439	13439		24.203	0.68005	1	7041100			48784	1244	32756	32769	55102	55102					0.108226984023986
RKYRRLTN	8	Unmodified	_RKYRRLTN_					0	0	0			REV__ENSG00000164105|ENST00000296504|SAP30;REV__ENST00000520731.1_1_5:153832004-153835585:+|nuORF	REV__ENSG00000164105|ENST00000296504|SAP30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.830078125	2	553.830706	1105.64686	1.287	0.00071279	-2.2482	-0.0012451	-0.96123	-0.00053236	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.80706	1	9469	9469		19.36	0.25645	1	5348100	+		48785	21032;28108	32757	32770	55103	55103					0.09826167305527633
RKYVDPSR	8	Unmodified	_RKYVDPSR_					0	0	0		nc|ENSG00000155313|Q9UHP3|USP25;nc|ENSG00000155313|Q9UHP3-1|USP25;ENSG00000155313|ENST00000400183|USP25;ENST00000464435.1_1_21:17172090-17177592:+|nuORF	nc|ENSG00000155313|Q9UHP3|USP25	nc|ENSG00000155313|Q9UHP3|USP25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.7817687988281	2	510.78289	1019.55123	0.57365	0.00029301	-0.7572	-0.00038677	-0.18355	-9.3756E-05	510.78246923554457	26.283	0.78617	26.329	26.034	26.821	0.045507					43	21	3	0	0	0	0.7468	1	1113	1113		65.465	3.358	1	147580			48786	5321	32758	32771	55104	55104					0.04223394394614388
RKYVNIKSR	9	Unmodified	_RKYVNIKSR_					0	0	0			REV__ENSG00000048162|ENST00000614830|NOP16	REV__ENSG00000048162|ENST00000614830|NOP16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3533935546875	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.77696	1	10726	10726		31.53	0	1	61091000	+		48787	16362	32759	32772	55105	55105					0.11863607136797327
RKYVNIKSR	9	Unmodified	_RKYVNIKSR_					0	0	0			REV__ENSG00000048162|ENST00000614830|NOP16	REV__ENSG00000048162|ENST00000614830|NOP16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3534545898438	2	582.354014	1162.69348	-0.84093	-0.00048972	-0.12395	-7.2182E-05	-0.96488	-0.0005619	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.78528	1	11241	11241		29.17	3.596	1	77752000	+		48788	16362	32759	32772	55106	55106					0.11863607136797327
RKYYRTRAKSL	11	Unmodified	_RKYYRTRAKSL_					0	0	0		ENST00000448110.6_1_20:35383252-35384143:-|nuORF	ENST00000448110.6_1_20:35383252-35384143:-|nuORF	ENST00000448110.6_1_20:35383252-35384143:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.28271484375	3	481.284398	1440.83137	-0.57975	-0.00027902	-0.55663	-0.0002679	-1.1364	-0.00054692	481.28359993784676	102.78	2.1606	102.82	102.1	104.26	0.04319					140	52	5	0	0	0	0.74405	1	11116	11116		23.378	6.8481	1	978410			48789	11853	32760	32773	55107	55107					0.12858310665387762
RLAAEKWA	8	Unmodified	_RLAAEKWA_					0	0	0			REV__ENST00000372246.7_1_X:107370046-107370121:+|nuORF	REV__ENST00000372246.7_1_X:107370046-107370121:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.76727294921875	2	472.769252	943.52395	-1.568	-0.00074129	-2.6998	-0.0012764	-4.2678	-0.0020177	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.87922	1	8056	8056		31.955	1.4512	1	404330	+		48790	25712	32761	32774	55108	55108					0.04992910854218735
RLAAKTQSL	9	Unmodified	_RLAAKTQSL_					0	0	0			REV__ENSG00000135837|ENST00000367607|CEP350	REV__ENSG00000135837|ENST00000367607|CEP350	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3002014160156	2	494.300916	986.587279	-0.67308	-0.0003327	0.69742	0.00034473	0.024336	1.2029E-05	494.301277334812	103.42	1.1043	103.46	102.98	104.09	0.041481					59	26	3	0	0	0	0.76255	1	11212	11212		35.618	0	1	522720	+		48791	19256	32762	32775	55109	55109					0.09344851571484014
RLAEWKATKL	10	Unmodified	_RLAEWKATKL_					0	0	0		ENST00000398028.3_1_6:151148820-151149375:+|nuORF;ENSG00000115539|ENST00000264254|PDCL3;ENST00000489621.1_1_3:101431466-101431589:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.9122314453125	3	405.91179	1214.71354	1.2294	0.00049903	-0.56809	-0.0002306	0.6613	0.00026843	405.9115005832532	37.578	1.9473	37.891	36.841	38.788	0.31312					140	48	5	0	0	0	0.053567	1	3027	3027		108.31	20.136	1	6110800			48792	2853	32763	32776	55110	55110					0.11477358076740529
RLAEWKATKL	10	Unmodified	_RLAEWKATKL_					0	0	0		ENST00000398028.3_1_6:151148820-151149375:+|nuORF;ENSG00000115539|ENST00000264254|PDCL3;ENST00000489621.1_1_3:101431466-101431589:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	ENST00000398028.3_1_6:151148820-151149375:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.9119873046875	3	405.91179	1214.71354	0.30773	0.00012491	0.2908	0.00011804	0.59853	0.00024295	405.91183014408284	37.421	1.3012	37.907	37.492	38.794	0.48581					116	32	5	0	0	0	0.032956	4	3009	3009;3020;3033;3046		113.67	30.024	1	6192400			48793	2853	32763	32776	55111;55112;55113;55114	55111					0.11477358076740529
RLAGAPIWL	9	Unmodified	_RLAGAPIWL_					0	0	0			REV__nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	REV__nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8034362792969	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.76996	1	4545	4545		33.516	1.5607	1	2118300	+		48794	19802	32764	32777	55115	55115					0.09366360785031702
RLAGAPIWL	9	Unmodified	_RLAGAPIWL_					0	0	0			REV__nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	REV__nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.80340576171875	2	498.803094	995.591636	-0.601	-0.00029978	1.7229	0.00085937	1.1219	0.00055959	498.8038061623405	51.762	2.3231	51.739	51.194	53.517	-0.02343					143	56	4	0	0	0	0.76996	1	4617	4617		33.516	8.0654	1	2240900	+		48795	19802	32764	32777	55116	55116					0.09366360785031702
RLAGKDHS	8	Unmodified	_RLAGKDHS_					0	0	0		ENSG00000133812|ENST00000256190|SBF2	ENSG00000133812|ENST00000256190|SBF2	ENSG00000133812|ENST00000256190|SBF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2404479980469	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.86677	1	7762	7762		27.882	1.0861	1	716910			48796	3895	32765	32778	55117	55117					0.021228632976999506
RLAGLKGALQH	11	Unmodified	_RLAGLKGALQH_					0	0	0			REV__ENST00000503271.5_1_4:113739280-113825611:+|nuORF	REV__ENST00000503271.5_1_4:113739280-113825611:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3541870117188	2	582.354014	1162.69348	0.16989	9.8934E-05	-0.87197	-0.0005078	-0.70208	-0.00040886	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.7342	1	12448	12448		25.574	1.3713	1	635410	+		48797	27843	32766	32779	55118	55118					0.11863607136797327
RLAGRRGP	8	Unmodified	_RLAGRRGP_					0	0	0			REV__ENSG00000141668|ENST00000269503|CBLN2	REV__ENSG00000141668|ENST00000269503|CBLN2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.7446594238281	2	441.77266	881.530767	1.8354	0.00081085	-3.7136	-0.0016406	-1.8781	-0.0008297	441.7703847641144	89.681	0.48116	89.729	89.527	90.008	0.048157					15	10	2	0	0	0	0.4196	1	9255	9255		13.775	0	1	36011	+		48798	19706	32767	32780	55119	55119					0.08526268525463365
RLAKLVVA	8	Unmodified	_RLAKLVVA_					0	0	0			REV__ENST00000569733.6_1_16:67575293-67580037:+|nuORF	REV__ENST00000569733.6_1_16:67575293-67580037:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.29986572265625	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.86288	1	6729	6729		26.796	0	1	1072400	+		48799	16312	32768	32781	55120	55120					0.14627262273370434
RLALLSNLTG	10	Unmodified	_RLALLSNLTG_					0	0	0		ENST00000244040.3_1_20:56938529-56938601:+|nuORF	ENST00000244040.3_1_20:56938529-56938601:+|nuORF	ENST00000244040.3_1_20:56938529-56938601:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.3225708007812	2	529.321848	1056.62914	-1.5195	-0.0008043	2.0796	0.0011008	0.56007	0.00029646	529.3227009054564	100.97	1.3749	101.12	100.57	101.95	0.15504					63	33	3	0	0	0	0.86272	1	10522	10522		24.519	2.5593	1	285080			48800	9262	32769	32782	55121	55121					0.10309407259978798
RLALLSNLTG	10	Unmodified	_RLALLSNLTG_					0	0	0		ENST00000244040.3_1_20:56938529-56938601:+|nuORF	ENST00000244040.3_1_20:56938529-56938601:+|nuORF	ENST00000244040.3_1_20:56938529-56938601:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	529.321848	1056.62914	-0.034797	-1.8419E-05	-0.089124	-4.7176E-05	-0.12392	-6.5594E-05	529.3216987720389	101.07	1.3447	101.1	100.61	101.96	0.031036	0.1043	0.00023577	NaN	24.519	38	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	247890			48801	9262	32769	32782							0.10309407259978798
RLALLSNLTG	10	Unmodified	_RLALLSNLTG_					0	0	0		ENST00000244040.3_1_20:56938529-56938601:+|nuORF	ENST00000244040.3_1_20:56938529-56938601:+|nuORF	ENST00000244040.3_1_20:56938529-56938601:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	529.321848	1056.62914	3.1661	0.0016759	-2.8563	-0.0015119	0.30982	0.00016399	529.320109340085	101.01	0.95305	100.96	100.53	101.49	-0.052109	-0.044104	-0.0026937	NaN	24.519	46	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	324130			48802	9262	32769	32782							0.10309407259978798
RLALLSNLTG	10	Unmodified	_RLALLSNLTG_					0	0	0		ENST00000244040.3_1_20:56938529-56938601:+|nuORF	ENST00000244040.3_1_20:56938529-56938601:+|nuORF	ENST00000244040.3_1_20:56938529-56938601:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	529.321848	1056.62914	1.2421	0.00065749	-1.5014	-0.00079474	-0.2593	-0.00013725	529.3209740968474	100.81	1.037	100.86	100.47	101.51	0.046356	-0.14502	-0.0012594	NaN	24.519	29	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217510			48803	9262	32769	32782							0.10309407259978798
RLALLSNLTG	10	Unmodified	_RLALLSNLTG_					0	0	0		ENST00000244040.3_1_20:56938529-56938601:+|nuORF	ENST00000244040.3_1_20:56938529-56938601:+|nuORF	ENST00000244040.3_1_20:56938529-56938601:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	529.321848	1056.62914	0.83112	0.00043993	-0.17303	-9.1589E-05	0.65808	0.00034834	529.3214292628094	100.82	1.3477	100.96	100.46	101.81	0.14352	-0.038969	0.00014694	NaN	24.519	55	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	328800			48804	9262	32769	32782							0.10309407259978798
RLALPPCL	8	Unmodified	_RLALPPCL_					0	0	0		ENSG00000185742|ENST00000327419|C11orf87	ENSG00000185742|ENST00000327419|C11orf87	ENSG00000185742|ENST00000327419|C11orf87	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7679138183594	2	441.765123	881.515694	4.6911	0.0020724	1.7355	0.00076667	6.4266	0.0028391	441.76590394209916	107.02	1.0661	107.17	106.81	107.88	0.14929					95	39	4	0	0	0	0.82464	1	13112	13112		21.702	0	1	3173300			48805	7740	32770	32783	55122	55122					0.07019640613236788
RLALQGKTG	9	Unmodified	_RLALQGKTG_					0	0	0		nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-6|API5;ENSG00000166181|ENST00000531273|API5;ENST00000532267.1_1_11:43351536-43357422:+|nuORF	nc|ENSG00000166181|Q9BZZ5-3|API5	nc|ENSG00000166181|Q9BZZ5-3|API5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2882385253906	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.38	1	116.36	115.86	116.86	-0.02433								0	0	0	0.31117	1	12887	12887		26.693	1.2427	1				48806	6166	32771	32784	55123	55123					0.0874858239999412
RLAMALLQH	9	Unmodified	_RLAMALLQH_					0	0	0			REV__ENSG00000177694|ENST00000454872|NAALADL2	REV__ENSG00000177694|ENST00000454872|NAALADL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.309814453125	2	526.805311	1051.59607	-0.036904	-1.9441E-05	-1.1847	-0.0006241	-1.2216	-0.00064354	527.3054504644606	99.375	1.7033	99.425	98.884	100.59	0.04982					129	39	5	0	0	0	0.78058	2	10503	10503;10528		30.504	3.8107	1	1726400	+		48807	22226	32772	32785	55124;55125	55124					0.07233501936298126
RLAQNILSY	9	Unmodified	_RLAQNILSY_					0	0	0		ENSG00000166170|ENST00000299204|BAG5;nc|ENSG00000166170|Q9UL15-2|BAG5	ENSG00000166170|ENST00000299204|BAG5	ENSG00000166170|ENST00000299204|BAG5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.3067016601562	2	539.306198	1076.59784	-0.020337	-1.0968E-05	-0.21177	-0.00011421	-0.2321	-0.00012518	539.3058512123412	54.971	0.88146	55.378	54.99	55.871	0.40663					45	20	3	0	0	0	0.18601	1	5616	5616		76.774	13.468	1	1054400			48808	6165	32773	32786	55126	55126					0.06260834225918188
RLAQNILSY	9	Unmodified	_RLAQNILSY_					0	0	0		ENSG00000166170|ENST00000299204|BAG5;nc|ENSG00000166170|Q9UL15-2|BAG5	ENSG00000166170|ENST00000299204|BAG5	ENSG00000166170|ENST00000299204|BAG5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.3065185546875	2	539.306198	1076.59784	-0.60361	-0.00032553	0.47936	0.00025852	-0.12424	-6.7005E-05	539.3062587677553	54.751	1.0064	55.32	55.027	56.033	0.56836					53	23	4	0	0	0	0.10807	3	5612	5601;5612;5626		90.777	27.47	1	1206100			48809	6165	32773	32786	55127;55128;55129	55128					0.06260834225918188
RLARLLGVHTQ	11	Unmodified	_RLARLLGVHTQ_					0	0	0		nc|ENSG00000108604|Q92925-3|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;ENSG00000108604|ENST00000448276|SMARCD2	nc|ENSG00000108604|Q92925-3|SMARCD2	nc|ENSG00000108604|Q92925-3|SMARCD2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.927001953125	3	421.926322	1262.75714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.531	1	16.59	16.09	17.09	0.059269								0	0	0	0.56276	1	160	160		22.562	0	1				48810	2421	32774	32787	55130	55130					0.13626967573895854
RLARVVSQL	9	Unmodified	_RLARVVSQL_					0	0	0			REV__nc|ENSG00000140691|Q96C12-3|ARMC5	REV__nc|ENSG00000140691|Q96C12-3|ARMC5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.28125	2	521.330008	1040.64546	-1.7474	-0.00091097	3.3653	0.0017544	1.6179	0.00084344	521.3312449853511	42.58	0.45667	43.278	43.091	43.548	0.69754					12	10	2	0	0	0	0.20789	1	3826	3826		56.721	21.103	1	234470	+		48811	19638	32775	32788	55131	55131					0.12676533216767893
RLASGAPW	8	Unmodified	_RLASGAPW_					0	0	0			REV__ENSG00000187714|ENST00000374115|SLC18A3	REV__ENSG00000187714|ENST00000374115|SLC18A3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	429.2356262207031	2	429.235045	856.455536	-1.5383	-0.00066028	3.1941	0.001371	1.6559	0.00071075	429.23631228522396	63.563	2.4446	63.563	62.881	65.325	0					341	112	4	0	0	0	0.92973	1	5564	5564		50.025	9.4519	1	5885000	+		48812	22936	32776	32789	55132	55132					0.02156666274379404
RLASGAPW	8	Unmodified	_RLASGAPW_					0	0	0			REV__ENSG00000187714|ENST00000374115|SLC18A3	REV__ENSG00000187714|ENST00000374115|SLC18A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.2354736328125	2	429.235045	856.455536	0.92962	0.00039903	0.55362	0.00023763	1.4832	0.00063666	429.2351427168519	63.189	2.3191	63.218	62.635	64.954	0.028133					251	82	4	0	0	0	0.91005	1	5919	5919		42.474	1.9018	1	5799800	+		48813	22936	32776	32789	55133	55133					0.02156666274379404
RLASGAPW	8	Unmodified	_RLASGAPW_					0	0	0			REV__ENSG00000187714|ENST00000374115|SLC18A3	REV__ENSG00000187714|ENST00000374115|SLC18A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.2356872558594	2	429.235045	856.455536	-1.7002	-0.00072977	3.2929	0.0014134	1.5927	0.00068365	429.23632496484737	63.188	2.3667	63.302	62.678	65.045	0.11389					282	104	4	0	0	0	0.92973	1	5518	5518		50.025	14.824	1	6358600	+		48814	22936	32776	32789	55134	55134					0.02156666274379404
RLASKVISH	9	Unmodified	_RLASKVISH_					0	0	0		nc|ENSG00000115970|Q6YHU6-4|THADA;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;ENSG00000115970|ENST00000405975|THADA	nc|ENSG00000115970|Q6YHU6-4|THADA	nc|ENSG00000115970|Q6YHU6-4|THADA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.80926513671875	2	505.808908	1009.60326	0.57417	0.00029042	-0.23418	-0.00011845	0.33999	0.00017197	505.8086447576315	22.338	0.58115	21.919	21.695	22.276	-0.41879					30	12	3	0	0	0	0.26953	2	893	893;905		67.494	12.717	1	174520			48815	2888	32777	32790	55135;55136	55135					0.098845578083683
RLATSLVEKL	10	Unmodified	_RLATSLVEKL_					0	0	0		ENSG00000125875|ENST00000354200|TBC1D20;nc|ENSG00000125875|Q96BZ9-3|TBC1D20	ENSG00000125875|ENST00000354200|TBC1D20	ENSG00000125875|ENST00000354200|TBC1D20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.3502197265625	2	565.350606	1128.68666	-0.44927	-0.00025399	0.11847	6.6976E-05	-0.3308	-0.00018702	565.3506345049396	48.648	0.6007	49.117	48.788	49.389	0.46941					36	14	3	0	0	0	0.34329	1	4700	4700		68.846	6.7387	1	1055400			48816	3423	32778	32791	55137	55137					0.1274624946554468
RLAVPLWQ	8	Unmodified	_RLAVPLWQ_					0	0	0			REV__ENST00000531029.5_1_11:64880120-64882285:+|nuORF	REV__ENST00000531029.5_1_11:64880120-64882285:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.296630859375	2	491.795269	981.575986	-1.4502	-0.0007132	2.5925	0.001275	1.1423	0.00056177	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.87922	1	4827	4827		31.955	3.7006	1	1043600	+		48817	28293	32779	32792	55138	55138					0.08446074267999393
RLCKKALP	8	Unmodified	_RLCKKALP_					0	0	0			REV__ENST00000367161.7_1_1:205116358-205116508:-|nuORF	REV__ENST00000367161.7_1_1:205116358-205116508:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.78973388671875	2	464.791672	927.568792	-0.5794	-0.0002693	-1.489	-0.0006921	-2.0684	-0.0009614	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.86288	1	2142	2142		26.796	1.3459	1	409180	+		48818	25554	32780	32793	55139	55139					0.10211018395898463
RLCSLLARSA	10	Unmodified	_RLCSLLARSA_					0	0	0			REV__ENST00000520584.5_1_8:144329158-144329458:+|nuORF	REV__ENST00000520584.5_1_8:144329158-144329458:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3168334960938	2	545.3135	1088.61245	1.9901	0.0010853	3.8799	0.0021158	5.87	0.003201	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.86471	1	9205	9205		30.318	1.1682	1	4704900	+		48819	28105	32781	32794	55140	55140					0.07168583102406956
RLCVIAAA	8	Unmodified	_RLCVIAAA_					0	0	0			REV__ENSG00000167264|ENST00000565263|DUS2	REV__ENSG00000167264|ENST00000565263|DUS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.739501953125	2	408.741648	815.468743	-1.9297	-0.00078873	-2.8268	-0.0011554	-4.7564	-0.0019441	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.86288	1	2133	2133		26.796	5.0938	1	521170	+		48820	21371	32782	32795	55141	55141					0.053627810620810124
RLDIWSPDYGS	11	Unmodified	_RLDIWSPDYGS_					0	0	0			REV__chr3:185926734-185930113|17|11.76|0.68|4.1|-|1|TRA2B,None|1	REV__chr3:185926734-185930113|17|11.76|0.68|4.1|-|1|TRA2B,None|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26763916015625	3	436.878815	1307.61462	-0.7473	-0.00032648	2.8825	0.0012593	2.1352	0.00093281	436.88015527265924	51.542	0.4114	51.519	51.154	51.566	-0.023426					10	9	2	0	0	0	0.1745	1	4475	4475		23.378	0	1	25199	+		48821	15804	32783	32796	55142	55142					-0.026887096787959308
RLDKEKGK	8	Unmodified	_RLDKEKGK_					0	0	0		ENSG00000167074|ENST00000266304|TEF	ENSG00000167074|ENST00000266304|TEF	ENSG00000167074|ENST00000266304|TEF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.2931213378906	2	487.293091	972.571629	0.071868	3.5021E-05	-0.081666	-3.9795E-05	-0.0097977	-4.7744E-06	487.2929485266333	21.072	1.5372	21.148	20.502	22.039	0.075848					159	76	4	0	0	0	0.014196	2	565	565;577		134.81	5.1281	1	2578500			48822	6263	32784	32797	55143;55144	55143					0.08424565054428967
RLDKEKGK	8	Unmodified	_RLDKEKGK_					0	0	0		ENSG00000167074|ENST00000266304|TEF	ENSG00000167074|ENST00000266304|TEF	ENSG00000167074|ENST00000266304|TEF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.2930603027344	2	487.293091	972.571629	0.71885	0.00035029	-0.76842	-0.00037445	-0.049573	-2.4157E-05	487.2926142390262	21.234	1.3308	21.217	20.618	21.949	-0.016428					149	64	4	0	0	0	0.12355	2	565	565;571		115.49	8.4865	1	2507800			48823	6263	32784	32797	55145;55146	55145					0.08424565054428967
RLDLEGNEY	9	Unmodified	_RLDLEGNEY_					0	0	0		ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5	ENSG00000100852|ENST00000345122|ARHGAP5	ENSG00000100852|ENST00000345122|ARHGAP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.7667236328125	2	554.767103	1107.51965	-0.77518	-0.00043005	2.3861	0.0013238	1.611	0.00089371	554.7674856598604	34.629	0.76677	34.624	34.217	34.983	-0.0047417					36	19	3	0	0	0	0.71772	1	2090	2090		39.253	3.6345	1	107300			48824	1876	32785	32798	55147	55147					-0.029806431499764585
RLDLTNSIIV	10	Unmodified	_RLDLTNSIIV_					0	0	0			REV__ENST00000535317.5_1_12:31230919-31231000:+|nuORF	REV__ENST00000535317.5_1_12:31230919-31231000:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.8436889648438	2	572.340238	1142.66592	1.327	0.00075947	-1.5484	-0.0008862	-0.22143	-0.00012674	572.33942129023	101.52	0.83997	101.57	101.18	102.02	0.044823					41	19	3	0	0	0	0.73395	1	10928	10928		42.864	5.7052	1	295770	+		48825	28383	32786	32799	55148	55148					0.10029659085898857
RLDNPDIIKIL	11	Unmodified	_RLDNPDIIKIL_					0	0	0			REV__ENSG00000173681|ENST00000379682|BCLAF3	REV__ENSG00000173681|ENST00000379682|BCLAF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677917480469	3	437.266122	1308.77654	-0.040504	-1.7711E-05	4.0065	0.0017519	3.966	0.0017342	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.75457	1	4240	4240		21.032	0.19508	1	2735300	+		48826	21944	32787	32800	55149	55149					0.13449879074119053
RLDNVNVIL	9	Unmodified	_RLDNVNVIL_					0	0	0			REV__ENSG00000112118|ENST00000596288|MCM3	REV__ENSG00000112118|ENST00000596288|MCM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	528.3134765625	2	528.314023	1054.61349	-0.082822	-4.3756E-05	0.29541	0.00015607	0.21259	0.00011231	528.3142773088822	98.195	1.2332	98.423	97.779	99.012	0.22787					59	27	3	0	0	0	0.69624	1	10207	10207		40.778	0.20554	1	437980	+		48827	17915	32788	32801	55150	55150					0.08837120742964544
RLDPRESIA	9	Unmodified	_RLDPRESIA_					0	0	0			REV__nc|ENSG00000052749|Q5JTH9-2|RRP12	REV__nc|ENSG00000052749|Q5JTH9-2|RRP12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.7925415039062	2	528.793455	1055.57236	-1.5408	-0.00081478	1.4151	0.0007483	-0.12571	-6.6474E-05	528.7940819687291	36.232	0.98741	36.232	35.879	36.867	0					58	23	4	0	0	0	0.55097	1	2115	2115		49.442	5.3247	1	756220	+		48828	29691	32789	32802	55151	55151					0.04679359703482078
RLDQLVEP	8	Unmodified	_RLDQLVEP_					0	0	0			REV__ENSG00000115756|ENST00000307845|HPCAL1	REV__ENSG00000115756|ENST00000307845|HPCAL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.2880554199219	2	485.271824	968.529095	-1.283	-0.00062261	1.004	0.0004872	-0.27904	-0.00013541	485.2711922332108	82.406	1.2584	82.466	81.516	82.774	0.059158					31	28	2	0	0	0	0.4196	1	8134	8134		27.882	4.8398	1	38963	+		48829	18147	32790	32803	55152	55152					0.04357169926197457
RLDQLVEP	8	Unmodified	_RLDQLVEP_					0	0	0			REV__ENSG00000115756|ENST00000307845|HPCAL1	REV__ENSG00000115756|ENST00000307845|HPCAL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	485.271824	968.529095	-0.7494	-0.00036366	1.5369	0.00074583	0.78753	0.00038217	485.2715057764452	82.333	0.41268	82.488	82.221	82.634	0.15474	0.01116	0.00028205	NaN	27.882	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46203	+		48830	18147	32790	32803							0.04357169926197457
RLDQSVSGCF	10	Unmodified	_RLDQSVSGCF_					0	0	0			REV__ENSG00000167014|ENST00000340827|TERB2	REV__ENSG00000167014|ENST00000340827|TERB2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	556.6862182617188	2	556.263673	1110.51279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.902	1	74.029	73.529	74.529	0.12711								0	0	0	0.45132	1	6807	6807		26.693	1.1189	1		+		48831	21347	32791	32804	55153	55153					-0.038042793021986654
RLDRVLGT	8	Unmodified	_RLDRVLGT_					0	0	0			REV__nc|ENSG00000183250|P58512-2|LINC01547	REV__nc|ENSG00000183250|P58512-2|LINC01547	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.280029296875	2	465.279983	928.545414	-0.11899	-5.5362E-05	0.19844	9.2329E-05	0.079452	3.6968E-05	465.2799248826243	89.079	2.3276	89.147	88.595	90.922	0.068161					120	54	4	0	0	0	0.89043	1	9114	9114		35.618	0	1	1620100	+		48832	25111	32792	32805	55154	55154					0.07828295882961811
RLDSLRAAS	9	Unmodified	_RLDSLRAAS_					0	0	0		ENSG00000107863|ENST00000396432|ARHGAP21;nc|ENSG00000107863|Q5T5U3-3|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21;ENST00000401578.2_1_6:80777785-80779717:-|nuORF	ENSG00000107863|ENST00000396432|ARHGAP21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7803039550781	2	494.780348	987.546142	-0.074951	-3.7084E-05	0.21159	0.00010469	0.13664	6.7607E-05	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.71772	1	8610	8610		39.253	2.0937	1	651380			48833	2376;11238	32793	32806	55155	55155					0.05187090532001548
RLDTYGSA	8	Unmodified	_RLDTYGSA_					0	0	0			REV__ENSG00000091542|ENST00000399138|ALKBH5	REV__ENSG00000091542|ENST00000399138|ALKBH5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7880554199219	2	441.719424	881.424296	0.18613	8.2219E-05	0.077177	3.409E-05	0.26331	0.00011631	441.71999338621356	39.011	0.22885	39.1	38.991	39.22	0.088371					8	5	2	0	0	0	0.4196	1	2363	2363		24.203	6.8378	1	39272	+		48834	17018	32794	32807	55156	55156					-0.02115951550376849
RLDVRMSY	8	Unmodified	_RLDVRMSY_					0	0	0			REV__nc|ENSG00000168477|P22105-1|TNXB	REV__nc|ENSG00000168477|P22105-1|TNXB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.818603515625	2	520.271301	1038.52805	-0.12835	-6.6776E-05	-1.6812	-0.00087468	-1.8095	-0.00094145	520.2702967240455	84.648	0.4446	85.095	84.792	85.236	0.44736					15	10	2	0	0	0	0.38948	1	9887	9887		99.375	0	1	120890	+		48835	21491	32795	32808	55157	55157					0.010326322856371917
RLDYVKLF	8	Unmodified	_RLDYVKLF_					0	0	0			REV__ENST00000551359.5_1_12:56713025-56726878:-|nuORF	REV__ENST00000551359.5_1_12:56713025-56726878:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	527.3074340820312	2	527.30821	1052.60187	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.29	1	101.49	100.99	101.99	0.2058								0	0	0	0.29344	1	10619	10619		31.955	0	1		+		48836	19227	32796	32809	55158	55158					0.07766923719600527
RLEDQYLF	8	Unmodified	_RLEDQYLF_					0	0	0		ENST00000455997.5_1_3:45763569-45764436:+|nuORF	ENST00000455997.5_1_3:45763569-45764436:+|nuORF	ENST00000455997.5_1_3:45763569-45764436:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.2761840820312	2	542.277106	1082.53966	-0.1449	-7.8574E-05	-0.069665	-3.7778E-05	-0.21456	-0.00011635	542.2769556804265	54.956	0.62906	55.362	55.032	55.661	0.40663					31	14	3	0	0	0	0.9295	1	5611	5611		55.504	2.1528	1	810480			48837	11961	32797	32810	55159	55159					0.0016915258061089844
RLEKLWHKAK	10	Unmodified	_RLEKLWHKAK_					0	0	0		ENST00000515119.5_1_4:3517776-3534065:-|nuORF;ENST00000296325.9_1_4:3514703-3533784:-|nuORF;ENSG00000163956|ENST00000650182|LRPAP1	ENST00000515119.5_1_4:3517776-3534065:-|nuORF	ENST00000515119.5_1_4:3517776-3534065:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.9340515136719	3	436.934818	1307.78262	0.27454	0.00011996	-2.2259	-0.00097255	-1.9513	-0.00085259	436.9337888157145	20.681	2.5222	20.051	19.49	22.012	-0.62961					153	62	4	0	0	0	0.8583	1	696	696		22.562	0	1	646260			48838	5892	32798	32811	55160	55160					0.14104442096277126
RLERPRQLL	9	Unmodified	_RLERPRQLL_					0	0	0			REV__ENST00000368605.2_1_6:116783229-116784525:+|nuORF	REV__ENST00000368605.2_1_6:116783229-116784525:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8663940429688	2	590.867289	1179.72002	-0.64255	-0.00037966	-1.0172	-0.00060105	-1.6598	-0.00098071	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.76255	1	11194	11194		35.618	0	1	52912000	+		48839	25599	32799	32812	55161	55161					0.13735296028130506
RLERPRQLL	9	Unmodified	_RLERPRQLL_					0	0	0			REV__ENST00000368605.2_1_6:116783229-116784525:+|nuORF	REV__ENST00000368605.2_1_6:116783229-116784525:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8663940429688	2	590.867289	1179.72002	0.84845	0.00050132	-2.4301	-0.0014359	-1.5816	-0.00093454	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.76764	1	10914	10914		34.173	0	1	94771000	+		48840	25599	32799	32812	55162	55162					0.13735296028130506
RLERPRQLL	9	Unmodified	_RLERPRQLL_					0	0	0			REV__ENST00000368605.2_1_6:116783229-116784525:+|nuORF	REV__ENST00000368605.2_1_6:116783229-116784525:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8670043945312	2	590.867289	1179.72002	0.89156	0.00052679	-2.3999	-0.001418	-1.5084	-0.00089125	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.67345	2	10874	10874;11052		42.396	10.46	1	84183000	+		48841	25599	32799	32812	55163;55164	55163					0.13735296028130506
RLERPRQLL	9	Unmodified	_RLERPRQLL_					0	0	0			REV__ENST00000368605.2_1_6:116783229-116784525:+|nuORF	REV__ENST00000368605.2_1_6:116783229-116784525:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8673706054688	2	590.867289	1179.72002	-1.319	-0.00077937	-0.16176	-9.558E-05	-1.4808	-0.00087495	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.78058	1	11064	11064		30.504	0.18592	1	81379000	+		48842	25599	32799	32812	55165	55165					0.13735296028130506
RLERTAIRRVP	11	Unmodified	_RLERTAIRRVP_					0	0	0		ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79302978515625	3	456.28451	1365.8317	0.19738	9.0062E-05	-3.6159	-0.0016499	-3.4186	-0.0015598	456.283678066582	38.374	0.072453	38.468	38.424	38.497	0.094318					4	2	2	0	0	0	0.17911	1	2272	2272		13.508	0.55046	1	10414			48843	4971	32800	32813	55166	55166					0.16341730385238407
RLESRDKAGP	10	Unmodified	_RLESRDKAGP_					0	0	0		ENST00000492185.5_1_6:31922795-31926696:-|nuORF;ENST00000488426.5_1_6:31922795-31926316:-|nuORF	ENST00000492185.5_1_6:31922795-31926696:-|nuORF	ENST00000492185.5_1_6:31922795-31926696:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.8099975585938	2	564.809636	1127.60472	0.17109	9.6631E-05	1.304	0.0007365	1.4751	0.00083313	564.8102162208658	43.686	0.61086	43.635	43.309	43.92	-0.051613					23	14	2	0	0	0	0.37206	1	3040	3040		66.429	2.8954	1	390700			48844	12627	32801	32814	55167	55167					0.04602147106470511
RLFAPNVLP	9	Unmodified	_RLFAPNVLP_					0	0	0		ENSG00000223510|ENST00000420162|CDRT15;ENSG00000214819|ENST00000399044|CDRT15L2	ENSG00000223510|ENST00000420162|CDRT15	ENSG00000223510|ENST00000420162|CDRT15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8087158203125	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.7932	1	3964	3964		23.042	3.6825	1	1550000			48845	8639	32802	32815	55168	55168					0.0904234343945518
RLFCYADWK	9	Unmodified	_RLFCYADWK_					0	0	0		ENST00000538485.6_1_14:90390290-90390416:-|nuORF	ENST00000538485.6_1_14:90390290-90390416:-|nuORF	ENST00000538485.6_1_14:90390290-90390416:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.294677734375	2	601.294776	1200.575	-0.039284	-2.3621E-05	2.3711	0.0014257	2.3318	0.0014021	601.295823583783	28.392	0.56702	28.428	28.223	28.79	0.03607					34	17	3	0	0	0	0.76255	1	1336	1336		35.618	4.0885	1	85245			48846	13465	32803	32816	55169	55169					-0.017265081632331203
RLFIGGIPK	9	Unmodified	_RLFIGGIPK_					0	0	0		nc|ENSG00000163694|A0AV96-2|RBM47;ENSG00000163694|ENST00000295971|RBM47	nc|ENSG00000163694|A0AV96-2|RBM47	nc|ENSG00000163694|A0AV96-2|RBM47	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.819091796875	2	500.818744	999.622936	-1.4085	-0.00070541	1.3017	0.00065192	-0.10681	-5.3494E-05	500.8192459155419	47.272	1.0396	47.743	47.388	48.428	0.4714					58	25	3	0	0	0	0.47272	1	4495	4495		53.351	3.3269	1	1221300			48847	5853	32804	32817	55170	55170					0.12310933819139791
RLFIGGIPK	9	Unmodified	_RLFIGGIPK_					0	0	0		nc|ENSG00000163694|A0AV96-2|RBM47;ENSG00000163694|ENST00000295971|RBM47	nc|ENSG00000163694|A0AV96-2|RBM47	nc|ENSG00000163694|A0AV96-2|RBM47	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.8193664550781	2	500.818744	999.622936	-0.81854	-0.00040994	0.69848	0.00034981	-0.12006	-6.013E-05	500.81893393080526	47.121	1.0928	48.045	47.651	48.744	0.92315					64	26	3	0	0	0	0.55097	1	4474	4474		49.442	3.4896	1	1164300			48848	5853	32804	32817	55171	55171					0.12310933819139791
RLFLNFRKA	9	Unmodified	_RLFLNFRKA_					0	0	0			REV__ENSG00000171714|ENST00000324559|ANO5	REV__ENSG00000171714|ENST00000324559|ANO5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.354248046875	2	582.85365	1163.69275	3.1866	0.0018573	-0.44966	-0.00026208	2.7369	0.0015952	582.8534083559822	112.34	0.46783	112.31	112.23	112.69	-0.025414					13	9	2	0	0	0	0.20789	1	12433	12433		15.642	8.4485	1	222340	+		48849	21760	32805	32818	55172	55172					0.11744812487745548
RLFNLVHRFLL	11	Unmodified	_RLFNLVHRFLL_					0	0	0			REV__ENSG00000180332|ENST00000379108|KCTD4	REV__ENSG00000180332|ENST00000379108|KCTD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6239929199219	3	476.625984	1426.85612	-1.6911	-0.000806	-3.0916	-0.0014735	-4.7826	-0.0022795	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.78085	8	12377	12125;12377;12412;12502;12589;12685;12730;12847		15.333	2.9003	1	2577100	+		48850	22390	32806	32819	55173;55174;55175;55176;55177;55178;55179;55180	55174					0.1597699053877477
RLFPPLRQR	9	Unmodified	_RLFPPLRQR_					0	0	0		nc|ENSG00000134882|Q8NBM4-4|UBAC2;ENST00000480738.1_1_13:99967048-100037586:+|nuORF;nc|ENSG00000134882|Q8NBM4-3|UBAC2;nc|ENSG00000134882|Q8NBM4-2|UBAC2;ENSG00000134882|ENST00000403766|UBAC2	nc|ENSG00000134882|Q8NBM4-4|UBAC2	nc|ENSG00000134882|Q8NBM4-4|UBAC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.8646850585938	2	591.864549	1181.71454	0.2284	0.00013518	-0.59661	-0.00035311	-0.3682	-0.00021793	591.8643633910696	36.472	1.3667	36.754	35.89	37.257	0.28173					67	33	3	0	0	0	0.041233	1	2854	2854		111.65	20.872	1	1105800			48851	3966	32807	32820	55181	55181					0.13095617236285761
RLFPPLRQR	9	Unmodified	_RLFPPLRQR_					0	0	0		nc|ENSG00000134882|Q8NBM4-4|UBAC2;ENST00000480738.1_1_13:99967048-100037586:+|nuORF;nc|ENSG00000134882|Q8NBM4-3|UBAC2;nc|ENSG00000134882|Q8NBM4-2|UBAC2;ENSG00000134882|ENST00000403766|UBAC2	nc|ENSG00000134882|Q8NBM4-4|UBAC2	nc|ENSG00000134882|Q8NBM4-4|UBAC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	591.8648071289062	2	591.864549	1181.71454	1.472	0.0008712	-1.4472	-0.00085655	0.024763	1.4656E-05	591.8635926552608	36.247	1.0298	36.687	36.333	37.363	0.44043					73	24	4	0	0	0	0.0092756	5	2867	2843;2854;2867;2878;2891		133.81	28.636	1	1173300			48852	3966	32807	32820	55182;55183;55184;55185;55186	55184					0.13095617236285761
RLFRRFVNRLR	11	Unmodified	_RLFRRFVNRLR_					0	0	0			REV__ENSG00000105397|ENST00000525621|TYK2	REV__ENSG00000105397|ENST00000525621|TYK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.6478576660156	3	511.651415	1531.93242	-0.32509	-0.00016633	-2.3233	-0.0011887	-2.6484	-0.001355	511.64996663544747	108.96	1.0403	109.1	108.28	109.32	0.13026					68	27	3	0	0	0	0.79224	2	11740	11740;11752		12.957	3.2649	1	1228900	+		48853	17535	32808	32821	55187;55188	55187					0.1877280715877987
RLFRWLYEKFR	11	Unmodified	_RLFRWLYEKFR_					0	0	0		ENSG00000167904|ENST00000434581|TMEM68	ENSG00000167904|ENST00000434581|TMEM68	ENSG00000167904|ENST00000434581|TMEM68	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92962646484375	4	404.232039	1612.89905	-0.97711	-0.00039498	-0.79307	-0.00032059	-1.7702	-0.00071556	404.48237127722035	45.05	0.5327	45.895	45.585	46.118	0.84438					15	12	2	0	0	0	0.18238	1	4195	4195		5.6988	4.5505	1	144470			48854	6339	32809	32822	55189	55189					0.11711760596176646
RLFVGSIPK	9	Unmodified	_RLFVGSIPK_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000271793|O60506-5|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.81793212890625	2	508.816202	1015.61785	-0.63775	-0.0003245	-2.7172	-0.0013826	-3.355	-0.0017071	508.81487501461754	43.667	3.2315	44.117	43.686	46.917	0.45025					183	79	5	0	0	0	0.030919	6	3955	3943;3955;3961;3973;3985;3997		117.81	30.057	1	105110000			48855	487;3429	32810	32823	55190;55191;55192;55193;55194;55195	55191					0.11066629956519591
RLFVGSIPK	9	Unmodified	_RLFVGSIPK_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000271793|O60506-5|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8130187988281	2	508.816202	1015.61785	-0.94369	-0.00048017	-2.6018	-0.0013239	-3.5455	-0.001804	508.814896871399	43.452	2.9729	44.226	43.866	46.839	0.77379					192	73	5	0	0	0	0.044173	4	3985	3925;3973;3985;3997		110.12	13.687	1	100420000			48856	487;3429	32810	32823	55196;55197;55198;55199	55198					0.11066629956519591
RLFVRIGAM	9	Unmodified	_RLFVRIGAM_					0	0	0		ENSG00000123562|ENST00000441076|MORF4L2;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1	ENSG00000123562|ENST00000441076|MORF4L2	ENSG00000123562|ENST00000441076|MORF4L2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8173217773438	2	531.815679	1061.6168	-0.78788	-0.00041901	3.1677	0.0016847	2.3799	0.0012656	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.74721	1	8183	8183		37.159	16.212	1	859730			48857	3279	32811	32824	55200	55200					0.08846092315957321
RLFVRIGAM	9	Unmodified	_RLFVRIGAM_					0	0	0		ENSG00000123562|ENST00000441076|MORF4L2;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1	ENSG00000123562|ENST00000441076|MORF4L2	ENSG00000123562|ENST00000441076|MORF4L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8171997070312	2	531.815679	1061.6168	1.0296	0.00054754	1.2167	0.00064705	2.2462	0.0011946	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.7932	1	8937	8937		24.203	0	1	1241100			48858	3279	32811	32824	55201	55201					0.08846092315957321
RLGAAGKR	8	Unmodified	_RLGAAGKR_					0	0	0			REV__ENSG00000139797|ENST00000267291|RNF113B	REV__ENSG00000139797|ENST00000267291|RNF113B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.7616271972656	2	414.761761	827.508969	1.2689	0.00052628	-1.0912	-0.0004526	0.17762	7.3671E-05	414.7612423593211	88.129	2.1347	88.578	88.017	90.152	0.44893					145	51	4	0	0	0	0.884	1	10451	10451		33.516	8.0654	1	6571000	+		48859	19571	32812	32825	55202	55202					0.08831463776891724
RLGAGGHAT	9	Unmodified	_RLGAGGHAT_					0	0	0		nc|ENSG00000168071|A6NC98-3|CCDC88B;ENST00000494566.5_1_11:64110218-64117194:+|nuORF	nc|ENSG00000168071|A6NC98-3|CCDC88B	nc|ENSG00000168071|A6NC98-3|CCDC88B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2275085449219	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.67345	1	7645	7645		42.396	4.5846	1	743780			48860	12752	32813	32826	55203	55203					0.015265941262214255
RLGAGGHAT	9	Unmodified	_RLGAGGHAT_					0	0	0		nc|ENSG00000168071|A6NC98-3|CCDC88B;ENST00000494566.5_1_11:64110218-64117194:+|nuORF	nc|ENSG00000168071|A6NC98-3|CCDC88B	nc|ENSG00000168071|A6NC98-3|CCDC88B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2277526855469	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.76255	1	7876	7876		35.618	1.4457	1	888480			48861	12752	32813	32826	55204	55204					0.015265941262214255
RLGAKLGFV	9	Unmodified	_RLGAKLGFV_					0	0	0		ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8013610839844	2	480.803094	959.591636	-0.87555	-0.00042097	-3.3204	-0.0015965	-4.1959	-0.0020174	480.80141229635706	99.415	2.4533	99.415	98.234	100.69	0					106	59	2	0	0	0	0.7932	1	9912	9912		26.796	0	1	116320			48862	7703	32814	32827	55205	55205					0.11022360785045748
RLGAKLGFV	9	Unmodified	_RLGAKLGFV_					0	0	0		ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.8009338378906	2	480.803094	959.591636	-0.54823	-0.00026359	-4.2519	-0.0020443	-4.8001	-0.0023079	480.80093903656257	95.17	4.1898	95.217	94.619	98.809	0.046982					308	97	5	0	0	0	0.7932	1	10280	10280		26.796	0	1	18729000			48863	7703	32814	32827	55206	55206					0.11022360785045748
RLGAPEAR	8	Unmodified	_RLGAPEAR_					0	0	0		ENSG00000197892|ENST00000524189|KIF13B;ENST00000529788.2_1_11:47269122-47270343:-|nuORF;nc|ENSG00000197892|Q9NQT8-2|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2515563964844	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.90523	1	9070	9070		40.778	5.1599	1	2235800			48864	8210	32815	32828	55207	55207					0.048394536773685104
RLGAPRTPRV	10	Unmodified	_RLGAPRTPRV_					0	0	0		ENST00000590277.1_1_19:9929234-9929697:-|nuORF;ENST00000588922.5_1_19:9929234-9929667:-|nuORF	ENST00000590277.1_1_19:9929234-9929697:-|nuORF	ENST00000590277.1_1_19:9929234-9929697:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.8457641601562	2	561.846356	1121.67816	1.4106	0.00079252	-2.5998	-0.0014607	-1.1893	-0.00066819	561.8447337891968	96.819	2.411	96.866	96.355	98.766	0.047798					140	55	5	0	0	0	0.86763	1	10282	10282		26.693	1.1189	1	1810100			48865	14222	32816	32829	55208	55208					0.12218740339585565
RLGARLILN	9	Unmodified	_RLGARLILN_					0	0	0			REV__ENST00000447814.1_2_2:95830931-95831156:-|nuORF	REV__ENST00000447814.1_2_2:95830931-95831156:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.31640625	2	513.33255	1024.65055	-1.3845	-0.00071072	-2.3789	-0.0012212	-3.7635	-0.0019319	513.3312048811255	42.064	0.55262	42.762	42.418	42.97	0.69754					23	13	3	0	0	0	0.20789	1	3693	3693		21.96	0	1	276100	+		48866	26828	32817	32830	55209	55209					0.13920837079376724
RLGASLGTIGT	11	Unmodified	_RLGASLGTIGT_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3045043945312	2	523.303655	1044.59276	-0.75421	-0.00039468	0.83726	0.00043814	0.083058	4.3465E-05	523.3039964981095	91.826	2.332	91.826	91.507	93.839	0					135	53	3	0	0	0	0.70737	1	8962	8962		30.318	1.1682	1	769560	+		48867	23565	32818	32831	55210	55210					0.07224530363305348
RLGASLGTIGT	11	Unmodified	_RLGASLGTIGT_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3033447265625	2	523.303655	1044.59276	-0.041206	-2.1563E-05	-0.13765	-7.2034E-05	-0.17886	-9.3597E-05	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.70737	1	8949	8949		30.318	2.4355	1	12431000	+		48868	23565	32818	32831	55211	55211					0.07224530363305348
RLGASLGTIGT	11	Unmodified	_RLGASLGTIGT_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.303466796875	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.65746	3	9208	9148;9196;9208		37.812	6.2817	1	13080000	+		48869	23565	32818	32831	55212;55213;55214	55214					0.07224530363305348
RLGASLGTIGT	11	Unmodified	_RLGASLGTIGT_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3037109375	2	523.303655	1044.59276	1.1688	0.00061163	-1.3622	-0.00071286	-0.19344	-0.00010123	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.62614	5	9374	8987;8999;9036;9061;9374		41.427	13.544	1	12580000	+		48870	23565	32818	32831	55215;55216;55217;55218;55219	55219					0.07224530363305348
RLGASLGTIGT	11	Unmodified	_RLGASLGTIGT_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3035278320312	2	523.303655	1044.59276	-0.1734	-9.0741E-05	-0.15994	-8.3699E-05	-0.33334	-0.00017444	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.70737	2	8789	8669;8789		30.318	3.596	1	13808000	+		48871	23565	32818	32831	55220;55221	55221					0.07224530363305348
RLGASLGTIGT	11	Unmodified	_RLGASLGTIGT_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3034057617188	2	523.303655	1044.59276	-0.17027	-8.9103E-05	0.13508	7.0686E-05	-0.035194	-1.8417E-05	523.3036223327587	91.376	2.6869	91.596	91.26	93.946	0.22013					111	63	2	0	0	0	0.7144	1	9216	9216		29.17	1.2878	1	1188800	+		48872	23565	32818	32831	55222	55222					0.07224530363305348
RLGASLGTIGT	11	Unmodified	_RLGASLGTIGT_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3032836914062	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.69995	1	8463	8463		31.53	0	1	3566700	+		48873	23565	32818	32831	55223	55223					0.07224530363305348
RLGASLGTIGT	11	Unmodified	_RLGASLGTIGT_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3032836914062	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.67778	3	8679	8655;8667;8679		35.152	6.0025	1	12189000	+		48874	23565	32818	32831	55224;55225;55226	55226					0.07224530363305348
RLGASLGTIGT	11	Unmodified	_RLGASLGTIGT_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3036499023438	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.70737	1	10414	10414		30.318	2.2362	1	13160000	+		48875	23565	32818	32831	55227	55227					0.07224530363305348
RLGDPVRGA	9	Unmodified	_RLGDPVRGA_					0	0	0			REV__ENST00000433688.2_2_11:63531028-63531832:-|nuORF	REV__ENST00000433688.2_2_11:63531028-63531832:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7691955566406	2	470.769783	939.525013	0.30506	0.00014361	-2.2092	-0.00104	-1.9041	-0.00089639	470.76861297979144	48.661	0.88583	48.698	48.371	49.257	0.037731					43	21	3	0	0	0	0.51307	1	3712	3712		51.335	3.4199	1	284770	+		48876	26656	32819	32832	55228	55228					0.052831252231385406
RLGDQMFT	8	Unmodified	_RLGDQMFT_					0	0	0		ENSG00000068654|ENST00000263857|POLR1A;ENST00000486964.5_1_2:86305209-86332944:-|nuORF	ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2359924316406	2	484.236927	966.459301	0.39551	0.00019152	-2.3516	-0.0011387	-1.9561	-0.00094721	484.23583864352696	86.77	1.4541	87.217	86.978	88.432	0.44629					87	34	4	0	0	0	0.93786	1	10201	10201		53.351	0	1	8816400			48877	1203	32820	32833	55229	55229					-0.025270320140862168
RLGDQMFT	8	Unmodified	_RLGDQMFT_					0	0	0		ENSG00000068654|ENST00000263857|POLR1A;ENST00000486964.5_1_2:86305209-86332944:-|nuORF	ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2362060546875	2	484.236927	966.459301	-0.88512	-0.00042861	-1.8146	-0.00087868	-2.6997	-0.0013073	484.23648902418813	86.261	1.1049	86.715	86.159	87.264	0.45429					90	26	5	0	0	0	0.9295	1	10175	10175		55.504	5.4797	1	35198000			48878	1203	32820	32833	55230	55230					-0.025270320140862168
RLGDSFCL	8	Carbamidomethyl (C)	_RLGDSFC(Carbamidomethyl (C))L_	RLGDSFC(1)L		RLGDSFC(56)L		0	1	0			REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|77|2|sense	REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|77|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2361145019531	2	484.236927	966.459301	-1.0641	-0.00051528	-0.85776	-0.00041536	-1.9219	-0.00093064	484.2366198797029	86.871	1.6056	87.325	87.019	88.625	0.45429					96	38	4	0	0	0	0.9295	1	10247	10247		55.504	7.5886	1	9271700	+		48879	29562	32821	32834	55231	55231	355				-0.02527032014074848
RLGDSQLVK	9	Unmodified	_RLGDSQLVK_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.298095703125	2	508.298373	1014.58219	-0.95406	-0.00048495	1.6278	0.00082741	0.67374	0.00034246	508.2985875373154	30.098	0.79341	30.126	29.833	30.627	0.028618					61	17	6	0	0	0	0.076066	2	1957	1945;1957		98.582	18.127	1	1055000			48880	6350	32822	32835	55232;55233	55233					0.07548547708859132
RLGDSQLVK	9	Unmodified	_RLGDSQLVK_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2982177734375	2	508.298373	1014.58219	0.94658	0.00048115	-1.0956	-0.00055691	-0.14905	-7.5763E-05	508.2975110475495	30.244	0.69923	30.154	29.917	30.616	-0.089544					37	15	3	0	0	0	0.086373	1	1981	1981		95.815	2.6197	1	1237100			48881	6350	32822	32835	55234	55234					0.07548547708859132
RLGFEKSLI	9	Unmodified	_RLGFEKSLI_					0	0	0			REV__ENSG00000203859|ENST00000369416|HSD3B2	REV__ENSG00000203859|ENST00000369416|HSD3B2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8169555664062	2	531.818941	1061.62333	-0.7527	-0.0004003	-3.1029	-0.0016502	-3.8556	-0.0020505	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.76255	1	8647	8647		35.618	1.4457	1	2790600	+		48882	23441	32823	32836	55235	55235					0.09498308748334239
RLGFGGLR	8	Unmodified	_RLGFGGLR_					0	0	0		ENSG00000241360|ENST00000215904|PDXP	ENSG00000241360|ENST00000215904|PDXP	ENSG00000241360|ENST00000215904|PDXP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2626647949219	2	438.264136	874.51372	-1.5746	-0.00069011	-1.1866	-0.00052006	-2.7613	-0.0012102	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.87922	1	2822	2822		31.955	0	1	22924000			48883	8792	32824	32837	55236	55236					0.07144347919654592
RLGGDCSR	8	Unmodified	_RLGGDCSR_					0	0	0		ENST00000256495.3_1_3:5025622-5025691:+|nuORF	ENST00000256495.3_1_3:5025622-5025691:+|nuORF	ENST00000256495.3_1_3:5025622-5025691:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	431.30474853515625	2	432.211244	862.407934	1.5942	0.00068903	-0.59491	-0.00025713	0.99929	0.0004319	432.2109540311972	76.601	1.1553	76.649	75.677	76.832	0.047981					60	39	2	0	0	0	0.4196	1	7516	7516		37.159	0	1	87835			48884	9340	32825	32838	55237	55237					-0.028773559881187794
RLGGGLGVAGG	11	Unmodified	_RLGGGLGVAGG_					0	0	0		ENSG00000136146|ENST00000258648|MED4	ENSG00000136146|ENST00000258648|MED4	ENSG00000136146|ENST00000258648|MED4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2640380859375	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.67493	1	7580	7580		35.618	5.1146	1	2957200			48885	4091	32826	32839	55238	55238					0.05435722848858404
RLGGGPVR	8	Unmodified	_RLGGGPVR_					0	0	0		ENST00000549441.6_1_12:49741035-49741203:+|nuORF	ENST00000549441.6_1_12:49741035-49741203:+|nuORF	ENST00000549441.6_1_12:49741035-49741203:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.25	2	406.248486	810.48242	3.1802	0.001292	-2.3078	-0.00093752	0.87248	0.00035444	406.24736760071454	117.21	0.50548	117.24	116.92	117.43	0.026466					24	18	2	0	0	0	0.86791	1	12884	12884		28.254	1.4582	1	32600			48886	13638	32827	32840	55239	55239					0.06959774885558545
RLGGIPVGV	9	Unmodified	_RLGGIPVGV_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000076555|O00763-2|ACACB;nc|ENSG00000076555|O00763-3|ACACB;ENSG00000076555|ENST00000338432|ACACB	nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000076555|O00763-3|ACACB	nc|ENSG00000278540|Q13085-3|ACACA	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.2719421386719	2	434.27417	866.533787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.743	1	35.774	35.274	36.274	0.031132								0	0	0	0.31088	1	1909	1909		26.796	0	1				48887	9032;1360	32828	32841	55240	55240					0.09518098859609836
RLGGLPSR	8	Unmodified	_RLGGLPSR_					0	0	0		ENST00000340181.8_1_6:36334208-36334316:-|nuORF	ENST00000340181.8_1_6:36334208-36334316:-|nuORF	ENST00000340181.8_1_6:36334208-36334316:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2615966796875	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.81897	1	9533	9533		20.947	2.6225	1	55300000			48888	10229	32829	32842	55241	55241					0.0755604405703707
RLGGPRAR	8	Unmodified	_RLGGPRAR_					0	0	0		ENST00000608477.1_1_7:128170420-128171047:-|nuORF	ENST00000608477.1_1_7:128170420-128171047:-|nuORF	ENST00000608477.1_1_7:128170420-128171047:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78753662109375	2	441.77266	881.530767	0.0083807	3.7024E-06	3.1771	0.0014036	3.1855	0.0014073	441.77390662056496	41.79	0.24527	41.794	41.587	41.832	0.0034142					9	5	2	0	0	0	0.4196	1	3089	3089		31.955	0	1	163350			48889	14475	32830	32843	55242	55242					0.08526268525451997
RLGGPRSL	8	Unmodified	_RLGGPRSL_					0	0	0		ENST00000608232.5_1_3:183851865-183852039:-|nuORF	ENST00000608232.5_1_3:183851865-183852039:-|nuORF	ENST00000608232.5_1_3:183851865-183852039:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2616271972656	2	428.261594	854.508634	-1.1356	-0.00048635	1.4339	0.00061408	0.29824	0.00012772	428.2621524287907	91.088	2.5476	91.088	90.477	93.025	0					222	59	5	0	0	0	0.8621	3	9013	8940;8952;9013		29.15	4.733	1	33233000			48890	14472	32831	32844	55243;55244;55245	55245					0.07556044057025701
RLGGPRSL	8	Unmodified	_RLGGPRSL_					0	0	0		ENST00000608232.5_1_3:183851865-183852039:-|nuORF	ENST00000608232.5_1_3:183851865-183852039:-|nuORF	ENST00000608232.5_1_3:183851865-183852039:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.26153564453125	2	428.261594	854.508634	1.2297	0.00052665	-1.0776	-0.00046151	0.1521	6.5138E-05	428.26104076888095	90.552	2.3243	91.003	90.412	92.737	0.45058					198	55	5	0	0	0	0.8537	2	10745	10745;10805		42.396	1.8235	1	32404000			48891	14472	32831	32844	55246;55247	55246					0.07556044057025701
RLGGPSLR	8	Unmodified	_RLGGPSLR_					0	0	0		ENST00000373314.7_1_9:130268061-130268379:-|nuORF	ENST00000373314.7_1_9:130268061-130268379:-|nuORF	ENST00000373314.7_1_9:130268061-130268379:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.261474609375	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.86677	1	9293	9293		27.882	0	1	52688000			48892	10740	32832	32845	55248	55248					0.0755604405703707
RLGGRGPV	8	Unmodified	_RLGGRGPV_					0	0	0		ENST00000380007.2_1_5:94956482-94957517:+|nuORF	ENST00000380007.2_1_5:94956482-94957517:+|nuORF	ENST00000380007.2_1_5:94956482-94957517:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2489013671875	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.80706	1	10460	10460		19.36	0	1	28266000			48893	10909	32833	32846	55249	55249					0.06959774885558545
RLGGTAQH	8	Unmodified	_RLGGTAQH_					0	0	0		ENST00000378799.10_1_16:71929242-71949560:+|nuORF	ENST00000378799.10_1_16:71929242-71949560:+|nuORF	ENST00000378799.10_1_16:71929242-71949560:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2269592285156	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.87479	1	7157	7157		30.504	1.3541	1	419890			48894	10875	32834	32847	55250	55250					0.015265941262214255
RLGGTAQH	8	Unmodified	_RLGGTAQH_					0	0	0		ENST00000378799.10_1_16:71929242-71949560:+|nuORF	ENST00000378799.10_1_16:71929242-71949560:+|nuORF	ENST00000378799.10_1_16:71929242-71949560:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.22705078125	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.87479	1	7282	7282		30.504	0	1	634680			48895	10875	32834	32847	55251	55251					0.015265941262214255
RLGKFKPE	8	Unmodified	_RLGKFKPE_					0	0	0			REV__nc|ENSG00000110218|Q96RD7-2|PANX1	REV__nc|ENSG00000110218|Q96RD7-2|PANX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7906494140625	2	487.792727	973.5709	-1.4525	-0.00070854	-3.1625	-0.0015427	-4.6151	-0.0022512	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.90089	1	7672	7672		39.253	0.23134	1	503530	+		48896	17802	32835	32848	55252	55252					0.08305770405377189
RLGKGQPWALL	11	Unmodified	_RLGKGQPWALL_					0	0	0			REV__ENST00000535420.5_1_1:154989902-154990361:+|nuORF	REV__ENST00000535420.5_1_1:154989902-154990361:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8690795898438	2	619.87204	1237.72953	-0.18235	-0.00011304	-3.8434	-0.0023824	-4.0258	-0.0024955	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.63176	1	9527	9527		40.778	2.9666	1	2627900	+		48897	28386	32836	32849	55253	55253					0.1201706431365892
RLGKLWTT	8	Unmodified	_RLGKLWTT_					0	0	0		ENST00000378192.2_1_9:35724919-35725570:-|nuORF	ENST00000378192.2_1_9:35724919-35725570:-|nuORF	ENST00000378192.2_1_9:35724919-35725570:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79052734375	2	487.792727	973.5709	-1.5393	-0.00075085	-2.8027	-0.0013671	-4.342	-0.002118	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.87922	1	8139	8139		31.955	1.4512	1	1760400			48898	10858	32837	32850	55254	55254					0.08305770405354451
RLGKMELFAL	10	Unmodified	_RLGKMELFAL_					0	0	0			REV__ENST00000573016.2_1_17:9479177-9479897:-|nuORF	REV__ENST00000573016.2_1_17:9479177-9479897:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3424072265625	2	589.341726	1176.6689	-1.324	-0.0007803	3.288	0.0019378	1.964	0.0011575	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86621	1	9447	9447		26.063	2.5407	1	17904000	+		48899	28955	32838	32851	55255	55255					0.08763210939059718
RLGKRVSD	8	Unmodified	_RLGKRVSD_					0	0	0		ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF	ENSG00000136718|ENST00000259239|IMP4	ENSG00000136718|ENST00000259239|IMP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7775573730469	2	465.777608	929.540663	-0.11871	-5.5291E-05	0.041983	1.9555E-05	-0.076723	-3.5736E-05	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.87922	1	8225	8225		31.955	0	1	1083800			48900	4131	32839	32852	55256	55256					0.07307411740180214
RLGKRVSD	8	Unmodified	_RLGKRVSD_					0	0	0		ENSG00000136718|ENST00000259239|IMP4;ENST00000460766.5_1_2:131100637-131104038:+|nuORF	ENSG00000136718|ENST00000259239|IMP4	ENSG00000136718|ENST00000259239|IMP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7774963378906	2	465.777608	929.540663	-1.5315	-0.00071332	1.4551	0.00067775	-0.076382	-3.5577E-05	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.87064	1	7871	7871		29.15	0	1	991370			48901	4131	32839	32852	55257	55257					0.07307411740180214
RLGLAALLLRR	11	Unmodified	_RLGLAALLLRR_					0	0	0			REV__ENST00000339374.10_1_14:21458030-21458174:+|nuORF	REV__ENST00000339374.10_1_14:21458030-21458174:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3795166015625	2	626.422231	1250.82991	-1.2035	-0.00075392	-4.448	-0.0027863	-5.6515	-0.0035402	626.41996551123	105.67	0.4665	105.75	105.53	106	0.073112					15	11	2	0	0	0	0.17714	1	11186	11186		19.104	9.3979	1	254170	+		48902	25228	32840	32853	55258	55258					0.21452721367290906
RLGLILALLRN	11	Unmodified	_RLGLILALLRN_					0	0	0			REV__ENST00000524193.1_1_8:38663043-38663160:+|nuORF	REV__ENST00000524193.1_1_8:38663043-38663160:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.4165649414062	2	626.416614	1250.81868	-1.255	-0.00078617	1.7559	0.0010999	0.50089	0.00031377	626.4175648209418	15.3	0.18611	15.3	15.194	15.38	0					17	8	3	0	0	0	0.78658	1	22	22		14.137	0	1	91826	+		48903	28155	32841	32854	55259	55259					0.20329899273156116
RLGLLCRVC	9	Unmodified	_RLGLLCRVC_					0	0	0		ENST00000602477.1_1_1:9299915-9300071:+|nuORF	ENST00000602477.1_1_1:9299915-9300071:+|nuORF	ENST00000602477.1_1_1:9299915-9300071:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7933349609375	2	516.793889	1031.57323	-0.83709	-0.0004326	0.017152	8.8642E-06	-0.81994	-0.00042374	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.58151	1	8630	8630		47.916	12.297	1	490270			48904	14405	32842	32855	55260	55260					0.05870159547180265
RLGLLCRVC	9	Unmodified	_RLGLLCRVC_					0	0	0		ENST00000602477.1_1_1:9299915-9300071:+|nuORF	ENST00000602477.1_1_1:9299915-9300071:+|nuORF	ENST00000602477.1_1_1:9299915-9300071:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7936401367188	2	516.793889	1031.57323	-0.047501	-2.4548E-05	-0.75816	-0.00039181	-0.80566	-0.00041636	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.78058	1	9079	9079		30.504	0	1	692890			48905	14405	32842	32855	55261	55261					0.05870159547180265
RLGLLCRVC	9	Unmodified	_RLGLLCRVC_					0	0	0		ENST00000602477.1_1_1:9299915-9300071:+|nuORF	ENST00000602477.1_1_1:9299915-9300071:+|nuORF	ENST00000602477.1_1_1:9299915-9300071:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7933349609375	2	516.793889	1031.57323	0.67669	0.00034971	-1.8062	-0.00093341	-1.1295	-0.0005837	516.7929283696592	86.202	2.6305	86.258	84.584	87.215	0.055641					143	60	4	0	0	0	0.62081	1	8751	8751		45.952	5.3793	1	319120			48906	14405	32842	32855	55262	55262					0.05870159547180265
RLGLLCRVC	9	Unmodified	_RLGLLCRVC_					0	0	0		ENST00000602477.1_1_1:9299915-9300071:+|nuORF	ENST00000602477.1_1_1:9299915-9300071:+|nuORF	ENST00000602477.1_1_1:9299915-9300071:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7935180664062	2	516.793889	1031.57323	-1.5587	-0.00080555	0.70766	0.00036572	-0.85108	-0.00043983	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.77546	1	8815	8815		31.955	1.6371	1	755180			48907	14405	32842	32855	55263	55263					0.05870159547180265
RLGMITHLF	9	Oxidation (M)	_RLGM(Oxidation (M))ITHLF_		RLGM(1)ITHLF		RLGM(44)ITHLF	0	0	1		nc|ENSG00000171804|Q6ZQQ6|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;ENSG00000171804|ENST00000447313|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3059692382812	2	552.305144	1102.59573	2.2801	0.0012593	0.10903	6.022E-05	2.3891	0.0013195	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.64922	1	9908	9908		44.117	11.304	1	1797400			48908	6711	32843	32856	55264	55264		115			0.048540822164113706
RLGMITHLF	9	Oxidation (M)	_RLGM(Oxidation (M))ITHLF_		RLGM(1)ITHLF		RLGM(44)ITHLF	0	0	1		nc|ENSG00000171804|Q6ZQQ6|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;ENSG00000171804|ENST00000447313|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3062133789062	2	552.305144	1102.59573	1.2817	0.0007079	0.93985	0.00051908	2.2216	0.001227	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.64922	1	9643	9643		44.117	6.3053	1	1712700			48909	6711	32843	32856	55265	55265		115			0.048540822164113706
RLGNKAQPHL	10	Unmodified	_RLGNKAQPHL_					0	0	0		chr5:64754362-64754578|44|47.39|0.33|7.16|-|1|TE_info:AluJr,AluJr_dup22332,Alu,SINE,donor,-,64754578,64754758|SREK1IP1,None|2	chr5:64754362-64754578|44|47.39|0.33|7.16|-|1|TE_info:AluJr,AluJr_dup22332,Alu,SINE,donor,-,64754578,64754758|SREK1IP1,None|2	chr5:64754362-64754578|44|47.39|0.33|7.16|-|1|TE_info:AluJr,AluJr_dup22332,Alu,SINE,donor,-,64754578,64754758|SREK1IP1,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.330539	1132.64652	0.48094	0.00027285	-1.4928	-0.00084691	-1.0119	-0.00057406	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.86589	1	8874	8874		29.15	1.2673	1	6590100			48910	451	32844	32857	55266	55266					0.08550747585650242
RLGNPPLPRN	10	Unmodified	_RLGNPPLPRN_					0	0	0		ENSG00000184083|ENST00000375180|FAM120C	ENSG00000184083|ENST00000375180|FAM120C	ENSG00000184083|ENST00000375180|FAM120C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3301391601562	2	567.330539	1132.64652	0.4851	0.00027521	-1.8618	-0.0010563	-1.3767	-0.00078107	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.86718	1	9210	9210		27.882	1.1893	1	18558000			48911	7580	32845	32858	55267	55267					0.08550747585650242
RLGPFRHRIG	10	Unmodified	_RLGPFRHRIG_					0	0	0			REV__ENST00000302351.8_1_5:73936169-73936514:-|nuORF	REV__ENST00000302351.8_1_5:73936169-73936514:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5747375488281	3	403.575624	1207.70504	-1.8238	-0.00073605	-0.39926	-0.00016113	-2.2231	-0.00089718	403.575388315242	82.768	3.2423	82.923	82.261	85.503	0.15474					165	75	3	0	0	0	0.86718	1	7917	7917		20.03	0	1	1511600	+		48912	24780	32846	32859	55268	55268					0.10949848950781416
RLGPGPPRG	9	Unmodified	_RLGPGPPRG_					0	0	0		ENST00000497613.2_1_8:145658938-145666334:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL;ENSG00000160949|ENST00000409379|TONSL	ENST00000497613.2_1_8:145658938-145666334:-|nuORF	ENST00000497613.2_1_8:145658938-145666334:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.7650146484375	2	453.767043	905.519533	0.27129	0.0001231	-3.0095	-0.0013656	-2.7382	-0.0012425	453.76550964369613	41.947	1.1764	41.916	41.067	42.244	-0.030991					46	29	2	0	0	0	0.74721	1	3129	3129		37.159	0	1	291970			48913	5616	32847	32860	55269	55269					0.06299446431319211
RLGPGPPRG	9	Unmodified	_RLGPGPPRG_					0	0	0		ENST00000497613.2_1_8:145658938-145666334:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL;ENSG00000160949|ENST00000409379|TONSL	ENST00000497613.2_1_8:145658938-145666334:-|nuORF	ENST00000497613.2_1_8:145658938-145666334:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.7657165527344	2	453.767043	905.519533	-0.098866	-4.4862E-05	-2.9209	-0.0013254	-3.0198	-0.0013703	453.7655359393201	41.096	0.91404	41.05	40.674	41.588	-0.045467					76	30	3	0	0	0	0.62081	1	2708	2708		45.952	11.779	1	750830			48914	5616	32847	32860	55270	55270					0.06299446431319211
RLGPGPPRG	9	Unmodified	_RLGPGPPRG_					0	0	0		ENST00000497613.2_1_8:145658938-145666334:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL;ENSG00000160949|ENST00000409379|TONSL	ENST00000497613.2_1_8:145658938-145666334:-|nuORF	ENST00000497613.2_1_8:145658938-145666334:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.765869140625	2	453.767043	905.519533	-0.13114	-5.9507E-05	-2.4763	-0.0011237	-2.6075	-0.0011832	453.7659298914551	41.976	1.7233	41.931	41.177	42.9	-0.045471					104	47	4	0	0	0	0.64922	1	2799	2799		44.117	13.613	1	768160			48915	5616	32847	32860	55271	55271					0.06299446431319211
RLGPGPPRG	9	Unmodified	_RLGPGPPRG_					0	0	0		ENST00000497613.2_1_8:145658938-145666334:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL;ENSG00000160949|ENST00000409379|TONSL	ENST00000497613.2_1_8:145658938-145666334:-|nuORF	ENST00000497613.2_1_8:145658938-145666334:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	453.767043	905.519533	-2.5938	-0.001177	-1.9473	-0.00088364	-4.5412	-0.0020606	453.76606745856094	40.481	0.7281	40.873	40.337	41.065	0.39209	-0.16129	0.00048041	NaN	45.952	40	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1717400			48916	5616	32847	32860							0.06299446431319211
RLGPGPPRG	9	Unmodified	_RLGPGPPRG_					0	0	0		ENST00000497613.2_1_8:145658938-145666334:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL;ENSG00000160949|ENST00000409379|TONSL	ENST00000497613.2_1_8:145658938-145666334:-|nuORF	ENST00000497613.2_1_8:145658938-145666334:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	453.767043	905.519533	-1.399	-0.00063482	-3.1203	-0.0014159	-4.5193	-0.0020507	453.76550046679694	40.236	1.0068	40.825	40.174	41.181	0.58915	-0.20869	-0.00058406	NaN	45.952	43	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	979960			48917	5616	32847	32860							0.06299446431319211
RLGPLLHP	8	Unmodified	_RLGPLLHP_					0	0	0		nc|ENSG00000185436|Q8IU57-3|IFNLR1	nc|ENSG00000185436|Q8IU57-3|IFNLR1	nc|ENSG00000185436|Q8IU57-3|IFNLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.77960205078125	2	451.782162	901.549771	-1.2361	-0.00055844	-3.2591	-0.0014724	-4.4952	-0.0020308	451.78060040496564	86.527	1.3161	86.721	86.176	87.492	0.19379					78	30	4	0	0	0	0.81548	1	8510	8510		20.482	0	1	231810			48918	15150	32848	32861	55272	55272					0.09505805096512177
RLGPMTLN	8	Unmodified	_RLGPMTLN_					0	0	0			REV__ENST00000482645.1_1_2:3383573-3392513:+|nuORF	REV__ENST00000482645.1_1_2:3383573-3392513:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.24932861328125	2	451.249837	900.485122	-0.97999	-0.00044222	-1.1427	-0.00051564	-2.1227	-0.00095786	451.24921015554173	65.724	1.4568	65.769	65.089	66.546	0.045113					104	74	2	0	0	0	0.85277	1	5812	5812		25.45	1.2474	1	906430	+		48919	21779	32849	32862	55273	55273					0.03089862228216589
RLGPQPTSPLV	11	Unmodified	_RLGPQPTSPLV_					0	0	0			REV__ENST00000587252.5_1_19:56156851-56156968:+|nuORF	REV__ENST00000587252.5_1_19:56156851-56156968:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.842529296875	2	582.840405	1163.66626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.379	1	19.379	18.879	19.879	0								0	0	0	0.56276	1	409	409		29.17	3.7199	1		+		48920	29124	32850	32863	55274	55274					0.09097078805734782
RLGPRFVSIR	10	Unmodified	_RLGPRFVSIR_					0	0	0			REV__ENSG00000106028|ENST00000265304|SSBP1	REV__ENSG00000106028|ENST00000265304|SSBP1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.9154968261719	3	400.915646	1199.72511	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.33	1	118.35	117.85	118.85	0.026466								0	0	0	0.45132	1	13018	13018		24.232	4.2013	1		+		48921	17594	32851	32864	55275	55275					0.1332359989073666
RLGPRLRGRQ	10	Unmodified	_RLGPRLRGRQ_					0	0	0			REV__nc|ENSG00000187260|Q86TI4-4|WDR86	REV__nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747985839844	3	403.586412	1207.73741	-0.14432	-5.8244E-05	-2.7547	-0.0011118	-2.899	-0.00117	403.9186902855728	81.057	0.32478	81.557	81.419	81.744	0.49966					10	7	2	0	0	0	0.37624	1	9358	9358		47.96	32.622	1	94022	+		48922	30112	32852	32865	55276	55276					0.14184636353775204
RLGPRLRGRQ	10	Unmodified	_RLGPRLRGRQ_					0	0	0			REV__nc|ENSG00000187260|Q86TI4-4|WDR86	REV__nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57476806640625	3	403.586412	1207.73741	-0.15461	-6.2398E-05	1.4578	0.00058836	1.3032	0.00052596	403.9202232296298	80.774	0.28295	81.301	81.203	81.486	0.52677					10	6	2	0	0	0	0.37624	1	9310	9310		40.058	14.166	1	167170	+		48923	30112	32852	32865	55277	55277					0.14184636353775204
RLGPRLRGRQ	10	Unmodified	_RLGPRLRGRQ_					0	0	0			REV__nc|ENSG00000187260|Q86TI4-4|WDR86	REV__nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747375488281	3	403.586412	1207.73741	-0.11006	-4.4418E-05	0.8724	0.00035209	0.76234	0.00030767	403.58673463371866	82.07	0.47094	82.544	82.201	82.672	0.47383					16	11	2	0	0	0	0.37624	1	9502	9502		43.651	16.007	1	140140	+		48924	30112	32852	32865	55278	55278					0.14184636353775204
RLGPSFILTG	10	Unmodified	_RLGPSFILTG_					0	0	0		nc|ENSG00000227011|F2Z3M2|LINC02876	nc|ENSG00000227011|F2Z3M2|LINC02876	nc|ENSG00000227011|F2Z3M2|LINC02876	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7503662109375	2	530.811116	1059.60768	0.39949	0.00021205	2.5601	0.0013589	2.9596	0.001571	530.8122450934164	15.707	0.22038	15.108	15.027	15.248	-0.59873					9	7	2	0	0	0	0.37624	1	39	39		9.1829	0.36058	1	51589			48925	15266	32853	32866	55279	55279					0.0802602223127451
RLGPSKKMH	9	Unmodified	_RLGPSKKMH_					0	0	0		chr12:18143293-18198401|18|114.39|0.0|23.45|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|57;chr12:18143293-18198304|14|75.14|0.0|22.84|-|1|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198304,18203231|RERGL,None|57;chr12:18143293-18197336|19|33.89|0.0|21.69|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|57;chr12:18088956-18198401|14|92.57|0.0|23.14|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|57;chr12:18088956-18197336|15|76.93|0.0|22.88|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|57	chr12:18143293-18198401|18|114.39|0.0|23.45|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|57	chr12:18143293-18198401|18|114.39|0.0|23.45|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18198401,18203231|RERGL,None|57	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.3053588867188	2	527.302936	1052.59132	1.242	0.00065492	2.5257	0.0013318	3.7677	0.0019867	527.3046705662339	99.127	1.5298	99.174	98.632	100.16	0.047523					112	35	4	0	0	0	0.76419	1	10620	10620		35.152	1.2304	1	1549600			48926	121	32854	32867	55280	55280					0.06712617793550635
RLGPSPLFA	9	Unmodified	_RLGPSPLFA_					0	0	0			REV__ENST00000388948.7_2_15:101609189-101609468:+|nuORF	REV__ENST00000388948.7_2_15:101609189-101609468:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27752685546875	2	479.279452	956.544351	-1.0476	-0.00050211	-2.956	-0.0014168	-4.0037	-0.0019189	479.27794521109934	87.608	3.0549	87.608	87.076	90.13	0					149	70	3	0	0	0	0.78536	1	8372	8372		29.15	2.4566	1	645930	+		48927	25990	32855	32868	55281	55281					0.0643408151404401
RLGRVRIRLL	10	Unmodified	_RLGRVRIRLL_					0	0	0			REV__ENST00000518385.5_3_8:97506087-97614626:+|nuORF	REV__ENST00000518385.5_3_8:97506087-97614626:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3794555664062	2	626.427848	1250.84114	0.9326	0.00058421	-4.1963	-0.0026287	-3.2637	-0.0020445	626.4258292728499	106.09	0.37419	106.13	105.87	106.24	0.03688					10	8	2	0	0	0	0.37624	1	11615	11615		10.265	0	1	75888	+		48928	24778	32856	32869	55282	55282					0.22575543461448433
RLGRVRIRLL	10	Unmodified	_RLGRVRIRLL_					0	0	0			REV__ENST00000518385.5_3_8:97506087-97614626:+|nuORF	REV__ENST00000518385.5_3_8:97506087-97614626:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3795776367188	2	626.427848	1250.84114	0.92591	0.00058002	3.7447	0.0023458	4.6707	0.0029258	626.4297503863917	105.54	0.22314	105.65	105.54	105.77	0.10765					4	2	2	0	0	0	0.37624	1	11272	11272		10.866	0.6003	1	115610	+		48929	24778	32856	32869	55283	55283					0.22575543461448433
RLGSGVISTK	10	Unmodified	_RLGSGVISTK_					0	0	0		ENST00000295079.6_1_2:200820652-200820697:+|nuORF	ENST00000295079.6_1_2:200820652-200820697:+|nuORF	ENST00000295079.6_1_2:200820652-200820697:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.30645751953125	2	509.306198	1016.59784	1.9599	0.00099817	-2.8037	-0.0014279	-0.84383	-0.00042977	509.30464157571356	93.196	1.6755	93.134	92.591	94.267	-0.06144					130	39	5	0	0	0	0.86698	1	9962	9962		28.081	0.19925	1	3032400			48930	9711	32857	32870	55284	55284					0.09020834225884755
RLGSKLLI	8	Unmodified	_RLGSKLLI_					0	0	0		ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2745666503906	2	450.30547	898.596387	0.49524	0.00022301	-2.667	-0.001201	-2.1718	-0.00097796	450.3042910491949	92.727	0.49541	93.173	92.947	93.442	0.44661					15	11	2	0	0	0	0.4196	1	11004	11004		30.504	7.4612	1	90694			48931	4081	32858	32871	55285	55285					0.1430324492780528
RLGSLRLSLHS	11	Unmodified	_RLGSLRLSLHS_					0	0	0		ENSG00000214688|ENST00000441508|C10orf105	ENSG00000214688|ENST00000441508|C10orf105	ENSG00000214688|ENST00000441508|C10orf105	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8692626953125	2	619.870028	1237.7255	-0.30615	-0.00018977	-0.58957	-0.00036546	-0.89572	-0.00055523	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.7144	1	10143	10143		29.17	1.0886	1	4796900			48932	8632	32859	32872	55286	55286					0.11614974819940471
RLGTIFIQA	9	Unmodified	_RLGTIFIQA_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.803466796875	2	509.805834	1017.59712	-0.054506	-2.7787E-05	-4.0835	-0.0020818	-4.1381	-0.0021096	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.75725	1	8447	8447		36.447	3.6343	1	828920			48933	720	32860	32873	55287	55287					0.08902039576832976
RLGTKPNVQ	9	Unmodified	_RLGTKPNVQ_					0	0	0		L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|85|3|sense;L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|118|2|sense	L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|85|3|sense	L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|85|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8004455566406	2	506.79854	1011.58253	0.2918	0.00014788	3.8962	0.0019746	4.188	0.0021225	506.8005319323782	43.625	1.7295	43.682	42.323	44.053	0.056747					65	45	2	0	0	0	0.78536	1	3023	3023		29.15	3.6994	1	255230			48934	14623	32861	32874	55288	55288					0.07719967428704422
RLGTLTQK	8	Unmodified	_RLGTLTQK_					0	0	0		nc|ENSG00000077522|P35609-2|ACTN2;ENSG00000077522|ENST00000366578|ACTN2	nc|ENSG00000077522|P35609-2|ACTN2	nc|ENSG00000077522|P35609-2|ACTN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.7822265625	2	458.782359	915.550165	0.041914	1.923E-05	-0.38631	-0.00017723	-0.3444	-0.000158	458.7821952343748	20.778	1.5787	20.854	20.502	22.08	0.075848					186	78	4	0	0	0	0.42407	1	548	548		79.451	0	1	8263600			48935	1383	32862	32875	55289	55289					0.08901180025702615
RLGTRLDL	8	Unmodified	_RLGTRLDL_					0	0	0		ENST00000507978.5_1_3:130732903-130735843:-|nuORF;ENSG00000034533|ENST00000264992|ASTE1	ENST00000507978.5_1_3:130732903-130735843:-|nuORF	ENST00000507978.5_1_3:130732903-130735843:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2869873046875	2	472.287808	942.561064	0.76193	0.00035985	-0.26462	-0.00012498	0.49731	0.00023487	472.28771256093336	99.111	1.7073	99.267	98.769	100.48	0.15659					91	39	3	0	0	0	0.87479	2	10322	10322;10347		40.573	0.6621	1	525470			48936	894	32863	32876	55290;55291	55290					0.08748582399982752
RLGVGPSEP	9	Unmodified	_RLGVGPSEP_					0	0	0			REV__ENST00000459638.5_3_3:69591404-69591638:-|nuORF	REV__ENST00000459638.5_3_3:69591404-69591638:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79046630859375	2	456.250892	910.48723	0.26568	0.00012122	0.84274	0.0003845	1.1084	0.00050572	456.25109805740766	41.575	0.48397	41.544	41.303	41.787	-0.030991					12	11	2	0	0	0	0.20789	1	3063	3063		30.504	5.0535	1	48114	+		48937	26988	32864	32877	55292	55292					0.02840614237675254
RLGVKALL	8	Unmodified	_RLGVKALL_					0	0	0			REV__nc|ENSG00000273540|Q96MI9|AGBL1	REV__nc|ENSG00000273540|Q96MI9|AGBL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.30023193359375	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.86288	1	6712	6712		26.796	0	1	1072400	+		48938	23990	32865	32878	55293	55293					0.14627262273359065
RLGVLGPVF	9	Unmodified	_RLGVLGPVF_					0	0	0			REV__ENSG00000188897|ENST00000696174|unknown	REV__ENSG00000188897|ENST00000696174|unknown	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27740478515625	2	479.297645	956.580737	-0.79778	-0.00038237	-3.8747	-0.0018571	-4.6724	-0.0022395	479.29567138919504	84.463	0.52148	84.522	84.154	84.675	0.05925					15	11	2	0	0	0	0.20789	1	8483	8483		18.324	0	1	39717	+		48939	23042	32866	32879	55294	55294					0.10070958410756248
RLGVMEKRLA	10	Unmodified	_RLGVMEKRLA_					0	0	0			REV__ENSG00000176973|ENST00000530349|FAM89B	REV__ENSG00000176973|ENST00000530349|FAM89B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.84326171875	2	586.85025	1171.68595	-1.3881	-0.00081461	-4.1418	-0.0024306	-5.5299	-0.0032452	586.8477688310322	43.671	0.51787	44.122	43.884	44.401	0.45025					35	12	4	0	0	0	0.4892	2	3977	3965;3977		56.721	8.9037	1	2123100	+		48940	22165	32867	32880	55295;55296	55296					0.10697131544861804
RLGVPVSFN	9	Unmodified	_RLGVPVSFN_					0	0	0			REV__ENSG00000114127|ENST00000392981|XRN1	REV__ENSG00000114127|ENST00000392981|XRN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.78009033203125	2	494.782359	987.550165	-0.85772	-0.00042438	-3.1278	-0.0015476	-3.9855	-0.001972	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.78983	1	8877	8877		27.882	2.4321	1	737700	+		48941	18034	32868	32881	55297	55297					0.05589180025708629
RLGVWYNF	8	Unmodified	_RLGVWYNF_					0	0	0		nc|ENSG00000122378|Q9BRX8-2|PRXL2A;ENSG00000122378|ENST00000606162|PRXL2A	nc|ENSG00000122378|Q9BRX8-2|PRXL2A	nc|ENSG00000122378|Q9BRX8-2|PRXL2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3107299804688	2	527.777077	1053.5396	0.21787	0.00011499	-1.9154	-0.0010109	-1.6976	-0.00089594	527.776110701672	81.975	0.5904	82.401	82.159	82.749	0.42645					24	14	2	0	0	0	0.4196	1	9503	9503		68.485	10.673	1	112070			48942	3221	32869	32882	55298	55298					0.014971973712817999
RLGWCSGVIL	10	Unmodified	_RLGWCSGVIL_					0	0	0		ENST00000508913.5_1_5:43043449-43044931:+|nuORF	ENST00000508913.5_1_5:43043449-43044931:+|nuORF	ENST00000508913.5_1_5:43043449-43044931:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.3057250976562	2	552.305144	1102.59573	-0.69245	-0.00038245	3.2977	0.0018214	2.6053	0.0014389	552.3068506755722	92.408	2.4109	92.871	91.891	94.302	0.46249					185	56	4	0	0	0	0.8545	1	11028	11028		36.447	2.2742	1	607550			48943	12983	32870	32883	55299	55299					0.04854082216434108
RLHAVLKPFLL	11	Unmodified	_RLHAVLKPFLL_					0	0	0		nc|ENSG00000102038|P28370-2|SMARCA1;nc|ENSG00000102038|P28370|SMARCA1;ENSG00000102038|ENST00000371121|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26788330078125	3	436.283447	1305.82851	-0.50472	-0.0002202	-0.42526	-0.00018554	-0.92998	-0.00040574	436.28476868510893	51.031	0.11194	50.946	50.856	50.968	-0.084538					5	3	2	0	0	0	0.18066	1	4040	4040		9.6461	0.43434	1	26948			48944	1982	32871	32884	55300	55300					0.18783087278575294
RLHFGNGH	8	Unmodified	_RLHFGNGH_					0	0	0		ENSG00000044524|ENST00000336596|EPHA3	ENSG00000044524|ENST00000336596|EPHA3	ENSG00000044524|ENST00000336596|EPHA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.7706604003906	2	469.241193	936.467832	-1.2149	-0.00057008	-3.0037	-0.0014095	-4.2186	-0.0019796	469.2392036658124	38.569	0.20943	39.091	38.994	39.204	0.52235					7	4	2	0	0	0	0.4196	1	3211	3211		35.201	0	1	64798			48945	949	32872	32885	55301	55301					-0.002942972625760376
RLHIRQGVE	9	Unmodified	_RLHIRQGVE_					0	0	0			REV__ENST00000446807.5_1_10:29747311-29771776:+|nuORF	REV__ENST00000446807.5_1_10:29747311-29771776:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.3342895507812	2	554.322714	1106.63087	0.70854	0.00039276	-1.3804	-0.00076518	-0.67185	-0.00037242	554.3219783637478	84.453	0.2164	84.601	84.517	84.733	0.14793					6	4	2	0	0	0	0.20789	1	8219	8219		10.265	0	1	33457	+		48946	26811	32873	32886	55302	55302					0.08182461068599878
RLHKQRKLISR	11	Unmodified	_RLHKQRKLISR_					0	0	0			REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9748840332031	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.742	1	45.758	45.258	46.258	0.015514								0	0	0	0.56276	1	3314	3314		16.53	3.0219	1		+		48947	29828	32874	32887	55303	55303					0.2059369854760007
RLHLKRTLFPW	11	Unmodified	_RLHLKRTLFPW_					0	0	0			REV__ENST00000578210.5_1_17:20623854-20624593:+|nuORF	REV__ENST00000578210.5_1_17:20623854-20624593:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.62884521484375	3	489.629617	1465.86702	0.18918	9.2628E-05	-4.173	-0.0020432	-3.9838	-0.0019506	489.62759995350746	16.963	0.38765	16.476	16.327	16.714	-0.48665					15	8	3	0	0	0	0.80361	1	192	192		10.587	0.4829	1	120500	+		48948	29022	32875	32888	55304	55304					0.15272392913061594
RLHLLVIP	8	Unmodified	_RLHLLVIP_					0	0	0			REV__ENST00000337080.7_1_19:56671600-56671822:+|nuORF	REV__ENST00000337080.7_1_19:56671600-56671822:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.8013610839844	2	480.821287	959.628021	-0.095373	-4.5858E-05	-1.8796	-0.00090373	-1.9749	-0.00094959	480.82051049132974	95.3	0.28651	95.368	95.184	95.47	0.068344					9	6	2	0	0	0	0.4196	1	9942	9942		14.664	0	1	145870	+		48949	25200	32876	32889	55305	55305					0.1465923768173525
RLHLPRHATVL	11	Unmodified	_RLHLPRHATVL_					0	0	0		ENST00000465952.5_1_13:31191850-31192063:+|nuORF	ENST00000465952.5_1_13:31191850-31192063:+|nuORF	ENST00000465952.5_1_13:31191850-31192063:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2728576660156	3	438.270201	1311.78877	2.0592	0.0009025	4.3289	0.0018972	6.3881	0.0027997	438.27198607190746	106.29	0.8153	106.33	105.9	106.72	0.03688					74	18	5	0	0	0	0.74405	1	11679	11679		23.378	0.81632	1	4519600			48950	12117	32877	32890	55306	55306					0.14534960327841873
RLHMLLSSRQI	11	Unmodified	_RLHMLLSSRQI_					0	0	0			REV__ENSG00000186448|ENST00000344387|ZNF197	REV__ENSG00000186448|ENST00000344387|ZNF197	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9320373535156	3	451.930968	1352.77107	1.2229	0.00055267	2.7025	0.0012213	3.9254	0.001774	451.93203668437076	98.85	2.391	98.898	97.373	99.764	0.048164					142	55	4	0	0	0	0.72892	1	10526	10526		26.75	0	1	439970	+		48951	22853	32878	32891	55307	55307					0.10879877010688688
RLHMLLSSRQI	11	Unmodified	_RLHMLLSSRQI_					0	0	0			REV__ENSG00000186448|ENST00000344387|ZNF197	REV__ENSG00000186448|ENST00000344387|ZNF197	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.93243408203125	3	451.930968	1352.77107	0.73765	0.00033337	3.0405	0.0013741	3.7781	0.0017074	451.932241061631	98.904	2.3627	99.06	97.538	99.901	0.15659					136	54	4	0	0	0	0.75779	1	10222	10222		20.315	1.0523	1	302530	+		48952	22853	32878	32891	55308	55308					0.10879877010688688
RLHSGPVTK	9	Unmodified	_RLHSGPVTK_					0	0	0		ENST00000399070.3_2_18:32870248-32870989:+|nuORF	ENST00000399070.3_2_18:32870248-32870989:+|nuORF	ENST00000399070.3_2_18:32870248-32870989:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7925720214844	2	497.793258	993.571963	0.033882	1.6866E-05	-0.29158	-0.00014514	-0.25769	-0.00012828	497.79294802566244	17.498	0.35384	17.015	16.761	17.115	-0.48256					16	7	3	0	0	0	0.086373	1	262	262		95.815	13.51	1	193010			48953	11198	32879	32892	55309	55309					0.0749198477428763
RLHSGPVTK	9	Unmodified	_RLHSGPVTK_					0	0	0		ENST00000399070.3_2_18:32870248-32870989:+|nuORF	ENST00000399070.3_2_18:32870248-32870989:+|nuORF	ENST00000399070.3_2_18:32870248-32870989:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	497.793258	993.571963	0.11493	5.7209E-05	-0.38275	-0.00019053	-0.26783	-0.00013332	497.79284591894856	17.564	0.58294	16.953	16.613	17.196	-0.6107	-0.030945	-5.34E-05	NaN	95.815	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	179040			48954	11198	32879	32892							0.0749198477428763
RLHSHPHTFAD	11	Unmodified	_RLHSHPHTFAD_					0	0	0			REV__ENST00000466900.5_1_3:37035370-37047454:+|nuORF	REV__ENST00000466900.5_1_3:37035370-37047454:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.8869934082031	3	439.886415	1316.63742	-0.32244	-0.00014184	-0.56934	-0.00025045	-0.89178	-0.00039228	439.8861485081008	32.569	1.5036	32.515	32.104	33.608	-0.05434					106	35	5	0	0	0	0.74405	1	1981	1981		23.378	1.5975	1	1366300	+		48955	27140	32880	32893	55310	55310					-0.00823645770674375
RLHSTKSFTKG	11	Unmodified	_RLHSTKSFTKG_					0	0	0			REV__nc|ENSG00000198416|Q4V348|ZNF658B	REV__nc|ENSG00000198416|Q4V348|ZNF658B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	631.3570556640625	2	631.354211	1260.69387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.507	1	60.495	59.995	60.995	-0.012447								0	0	0	0.56276	1	5600	5600		49.536	9.4779	1		+		48956	24000	32881	32894	55311	55311					0.0739498206596636
RLHTAAGGT	9	Unmodified	_RLHTAAGGT_					0	0	0		ENSG00000123810|ENST00000243578|B9D2	ENSG00000123810|ENST00000243578|B9D2	ENSG00000123810|ENST00000243578|B9D2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2412414550781	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.78536	1	7275	7275		29.15	1.2673	1	716910			48957	3289	32882	32895	55312	55312					0.021228632976999506
RLHTAAGGT	9	Unmodified	_RLHTAAGGT_					0	0	0		ENSG00000123810|ENST00000243578|B9D2	ENSG00000123810|ENST00000243578|B9D2	ENSG00000123810|ENST00000243578|B9D2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2408752441406	2	442.240858	882.467164	-0.73522	-0.00032514	0.71434	0.00031591	-0.020876	-9.2322E-06	442.2410832268947	81.468	4.5183	81.895	80.178	84.696	0.42645					210	109	2	0	0	0	0.67345	1	9342	9342		42.396	5.3677	1	866900			48958	3289	32882	32895	55313	55313					0.021228632976999506
RLHYAFRRRFA	11	Unmodified	_RLHYAFRRRFA_					0	0	0			REV__nc|ENSG00000115464|Q70CQ2-3|USP34	REV__nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.2830810546875	3	498.284733	1491.83237	-1.6153	-0.00080489	-1.9588	-0.00097604	-3.5741	-0.0017809	498.2836706814712	33.272	0.88227	33.271	32.947	33.829	-0.0016365					56	20	4	0	0	0	0.78391	1	1973	1973		14.694	5.4819	1	169750	+		48959	18123	32883	32896	55314	55314					0.10612569824957063
RLHYAFRRRFA	11	Unmodified	_RLHYAFRRRFA_					0	0	0			REV__nc|ENSG00000115464|Q70CQ2-3|USP34	REV__nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.2789611816406	3	498.284733	1491.83237	0.12325	6.1415E-05	-4.0871	-0.0020366	-3.9639	-0.0019751	498.6175011054031	39.039	0.4028	38.986	38.674	39.077	-0.052731					18	11	2	0	0	0	0.75544	1	2320	2320		20.837	6.7511	1	67599	+		48960	18123	32883	32896	55315	55315					0.10612569824957063
RLHYAFRRRFA	11	Unmodified	_RLHYAFRRRFA_					0	0	0			REV__nc|ENSG00000115464|Q70CQ2-3|USP34	REV__nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	498.284733	1491.83237	-0.63745	-0.00031763	-3.0986	-0.001544	-3.7361	-0.0018616	498.2831372957823	39.09	0.25412	39.1	38.978	39.232	0.010708	0.057176	0.00068138	NaN	20.837	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58670	+		48961	18123	32883	32896							0.10612569824957063
RLHYAFRRRFA	11	Unmodified	_RLHYAFRRRFA_					0	0	0			REV__nc|ENSG00000115464|Q70CQ2-3|USP34	REV__nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	498.284733	1491.83237	0.12325	6.1415E-05	-4.0871	-0.0020366	-3.9639	-0.0019751	498.6175011054031	39.039	0.4028	38.986	38.674	39.077	-0.052731	-0.057176	-0.00079632	NaN	20.837	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67599	+		48962	18123	32883	32896							0.10612569824957063
RLIDLRSPQIV	11	Unmodified	_RLIDLRSPQIV_					0	0	0		ENST00000312184.5_1_8:74894595-74894706:+|nuORF	ENST00000312184.5_1_8:74894595-74894706:+|nuORF	ENST00000312184.5_1_8:74894595-74894706:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2678527832031	3	437.269866	1308.78777	-1.5729	-0.00068777	-2.9102	-0.0012725	-4.483	-0.0019603	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.75121	1	4191	4191		21.78	1.4654	1	4358700			48963	9938	32884	32897	55316	55316					0.14572701168253843
RLIDSKGRSQ	10	Unmodified	_RLIDSKGRSQ_					0	0	0			REV__ENST00000598273.5_1_19:48283225-48283447:+|nuORF	REV__ENST00000598273.5_1_19:48283225-48283447:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.3334350585938	2	580.330736	1158.64692	0.33139	0.00019231	2.8328	0.001644	3.1642	0.0018363	580.3322507801092	39.778	0.78229	39.866	39.53	40.312	0.088375					57	19	4	0	0	0	0.42897	1	2459	2459		61.691	14.034	1	1035100	+		48964	29282	32885	32898	55317	55317					0.07394122514847368
RLIDVLARPVN	11	Unmodified	_RLIDVLARPVN_					0	0	0			REV__ENSG00000187902|ENST00000376325|SHISA7	REV__ENSG00000187902|ENST00000376325|SHISA7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5925598144531	3	422.594461	1264.76155	-1.7406	-0.00073557	-2.5077	-0.0010597	-4.2483	-0.0017953	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.67762	1	3947	3947		35.178	3.544	1	1126900	+		48965	22960	32886	32899	55318	55318					0.13976431996798055
RLIDVLARPVN	11	Unmodified	_RLIDVLARPVN_					0	0	0			REV__ENSG00000187902|ENST00000376325|SHISA7	REV__ENSG00000187902|ENST00000376325|SHISA7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7518005371094	3	422.594461	1264.76155	-0.2149	-9.0815E-05	-4.0143	-0.0016964	-4.2292	-0.0017872	422.9271913974845	76.646	0.23938	76.598	76.402	76.641	-0.048264					9	7	2	0	0	0	0.1767	1	7602	7602		13.508	6.8483	1	44404	+		48966	22960	32886	32899	55319	55319					0.13976431996798055
RLIDVLARPVN	11	Unmodified	_RLIDVLARPVN_					0	0	0			REV__ENSG00000187902|ENST00000376325|SHISA7	REV__ENSG00000187902|ENST00000376325|SHISA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.3850708007812	2	633.388054	1264.76155	0.12605	7.984E-05	-4.2714	-0.0027054	-4.1453	-0.0026256	633.3850253113031	51.101	1.496	51.017	50.491	51.987	-0.084538					79	43	3	0	0	0	0.73647	1	4085	4085		21.686	16.128	1	224090	+		48967	22960	32886	32899	55320	55320					0.13976431996798055
RLIIFTQSVK	10	Unmodified	_RLIIFTQSVK_					0	0	0		ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS;chr13:23375269-23375352|50|13.84|0.85|4.03|-|ENST00000402364|SACS,SACS	ENSG00000151835|ENST00000382292|SACS	ENSG00000151835|ENST00000382292|SACS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.8041687011719	3	402.251924	1203.73394	-0.088542	-3.5616E-05	3.6091	0.0014518	3.5205	0.0014161	402.25283715677085	20.019	0.50486	19.389	19.122	19.627	-0.62961					13	10	2	0	0	0	0.37624	1	566	566		15.333	0.63944	1	25928			48968	5146	32887	32900	55321	55321					0.14022528736541062
RLIIVGYVSIF	11	Unmodified	_RLIIVGYVSIF_					0	0	0			REV__ENST00000025301.3_1_13:42895410-42895458:+|nuORF	REV__ENST00000025301.3_1_13:42895410-42895458:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3941040039062	2	640.392273	1278.76999	-0.69345	-0.00044408	2.0468	0.0013107	1.3533	0.00086667	640.3933606010097	53.872	1.0072	53.872	53.507	54.514	0					69	30	3	0	0	0	0.73893	1	4501	4501		24.519	3.5723	1	206080	+		48969	24061	32888	32901	55322	55322					0.14175985913402656
RLIKPKPRT	9	Unmodified	_RLIKPKPRT_					0	0	0			REV__nc|ENSG00000133619|A5PL33-3|KRBA1	REV__nc|ENSG00000133619|A5PL33-3|KRBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.869384765625	2	554.8693	1107.72405	0.57286	0.00031786	-0.40692	-0.00022579	0.16594	9.2073E-05	554.8689840832363	19.886	0.70171	19.416	19.065	19.767	-0.46967					34	14	3	0	0	0	0.71772	2	577	554;577		39.253	7.3079	1	410780	+		48970	19085	32889	32902	55323;55324	55324					0.17449385521831573
RLIKRHKQVRT	11	Unmodified	_RLIKRHKQVRT_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.30841064453125	3	478.975788	1433.90553	-1.5624	-0.00074834	-1.026	-0.00049144	-2.5884	-0.0012398	479.30961963549026	52.606	1.2577	52.606	52.057	53.314	0					69	33	3	0	0	0	0.81219	1	4378	4378		8.7993	2.4784	1	125180	+		48971	21464	32890	32903	55325	55325					0.20593698547577333
RLIKRHKQVRT	11	Unmodified	_RLIKRHKQVRT_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97509765625	3	478.975788	1433.90553	-0.69273	-0.0003318	-2.0219	-0.00096845	-2.7146	-0.0013002	478.9746813820608	49.583	2.3312	49.559	48.401	50.732	-0.024033					111	53	3	0	0	0	0.79224	1	4154	4154		12.957	3.3113	1	142150	+		48972	21464	32890	32903	55326	55326					0.20593698547577333
RLIKRHKQVRT	11	Unmodified	_RLIKRHKQVRT_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3085021972656	3	478.975788	1433.90553	-1.9678	-0.00094254	-1.893	-0.00090669	-3.8608	-0.0018492	479.30912300096907	43.377	1.5252	43.377	42.724	44.249	0.00016785					100	36	3	0	0	0	0.78683	1	3376	3376		14.086	3.9821	1	374940	+		48973	21464	32890	32903	55327	55327					0.20593698547577333
RLIKRHKQVRT	11	Unmodified	_RLIKRHKQVRT_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3079528808594	3	478.975788	1433.90553	0.32204	0.00015425	-2.7165	-0.0013011	-2.3944	-0.0011469	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.80164	1	3805	3805		10.998	2.1989	1	307830	+		48974	21464	32890	32903	55328	55328					0.20593698547577333
RLILDRHGLA	10	Unmodified	_RLILDRHGLA_					0	0	0		ENSG00000142233|ENST00000270235|NTN5	ENSG00000142233|ENST00000270235|NTN5	ENSG00000142233|ENST00000270235|NTN5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.351318359375	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.05	1	115.02	114.52	115.52	-0.02433								0	0	0	0.45132	1	12749	12749		39.253	8.7492	1				48975	4553	32891	32904	55329	55329					0.11863607136797327
RLILLNQASAL	11	Unmodified	_RLILLNQASAL_					0	0	0			REV__ENST00000328550.6_1_19:38055330-38055624:-|nuORF	REV__ENST00000328550.6_1_19:38055330-38055624:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.59033203125	3	404.587195	1210.73976	0.18961	7.6715E-05	3.9321	0.0015909	4.1218	0.0016676	404.5886662890934	41.346	1.1707	41.315	40.657	41.828	-0.030991					72	31	3	0	0	0	0.76251	1	2953	2953		19.263	0	1	279590	+		48976	25094	32892	32905	55330	55330					0.14281627248237783
RLILSSSV	8	Unmodified	_RLILSSSV_					0	0	0			REV__ENST00000425046.1_1_3:4345037-4358927:+|nuORF	REV__ENST00000425046.1_1_3:4345037-4358927:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7710876464844	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.8347	1	3065	3065		23.042	0	1	9763800	+		48977	21651	32893	32906	55331	55331					0.0865437527713766
RLILSSSV	8	Unmodified	_RLILSSSV_					0	0	0			REV__ENST00000425046.1_1_3:4345037-4358927:+|nuORF	REV__ENST00000425046.1_1_3:4345037-4358927:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77178955078125	2	437.77146	873.528367	-1.1766	-0.00051507	-0.34958	-0.00015304	-1.5261	-0.0006681	437.77143489998485	40.358	2.279	40.947	39.956	42.235	0.58915					112	60	4	0	0	0	0.87479	1	3364	3364		30.504	0	1	5900400	+		48978	21651	32893	32906	55332	55332					0.0865437527713766
RLINKRIELV	10	Unmodified	_RLINKRIELV_					0	0	0			REV__nc|ENSG00000113532|Q92187-2|ST8SIA4	REV__nc|ENSG00000113532|Q92187-2|ST8SIA4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.6045837402344	3	418.60659	1252.79794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.408	1	49.314	48.814	49.814	-0.093178								0	0	0	0.45132	1	3822	3822		27.047	5.2669	1		+		48979	17997	32894	32907	55333	55333					0.18165308893503607
RLIPHTVLTFV	11	Unmodified	_RLIPHTVLTFV_					0	0	0		ENST00000574129.5_1_17:79680521-79687104:+|nuORF;ENSG00000183048|ENST00000350690|SLC25A10;nc|ENSG00000183048|Q9UBX3-2|SLC25A10	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3915405273438	2	648.395348	1294.77614	0.024155	1.5662E-05	-4.0311	-0.0026138	-4.007	-0.0025981	648.3927913840552	106.64	2.0197	106.64	104.87	106.89	0					89	46	4	0	0	0	0.72918	1	11072	11072		26.693	5.0072	1	6259100			48980	7497	32895	32908	55334	55334					0.14054504144905877
RLIPHTVLTFV	11	Unmodified	_RLIPHTVLTFV_					0	0	0		ENST00000574129.5_1_17:79680521-79687104:+|nuORF;ENSG00000183048|ENST00000350690|SLC25A10;nc|ENSG00000183048|Q9UBX3-2|SLC25A10	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3925170898438	2	648.395348	1294.77614	0.024154	1.5661E-05	-3.7072	-0.0024038	-3.6831	-0.0023881	648.3928433509174	107.73	1.0319	107.73	106.84	107.87	0					93	24	4	0	0	0	0.66929	1	11203	11203		36.447	6.129	1	35129000			48981	7497	32895	32908	55335	55335					0.14054504144905877
RLIPHTVLTFV	11	Unmodified	_RLIPHTVLTFV_					0	0	0		ENST00000574129.5_1_17:79680521-79687104:+|nuORF;ENSG00000183048|ENST00000350690|SLC25A10;nc|ENSG00000183048|Q9UBX3-2|SLC25A10	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3922729492188	2	648.395348	1294.77614	-0.0023386	-1.5163E-06	-3.9737	-0.0025765	-3.976	-0.002578	648.3926215212863	106.57	0.85555	106.54	106.01	106.87	-0.025146					71	19	4	0	0	0	0.6921	1	11565	11565		32.812	4.7309	1	19156000			48982	7497	32895	32908	55336	55336					0.14054504144905877
RLIPHTVLTFV	11	Unmodified	_RLIPHTVLTFV_					0	0	0		ENST00000574129.5_1_17:79680521-79687104:+|nuORF;ENSG00000183048|ENST00000350690|SLC25A10;nc|ENSG00000183048|Q9UBX3-2|SLC25A10	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3931884765625	2	648.395348	1294.77614	-0.0023385	-1.5163E-06	-3.8153	-0.0024738	-3.8177	-0.0024754	648.3927201405174	107.38	1.0747	107.34	106.86	107.93	-0.034409					97	25	4	0	0	0	0.64498	1	11697	11697		39.253	8.684	1	36844000			48983	7497	32895	32908	55337	55337					0.14054504144905877
RLIPHTVLTFV	11	Unmodified	_RLIPHTVLTFV_					0	0	0		ENST00000574129.5_1_17:79680521-79687104:+|nuORF;ENSG00000183048|ENST00000350690|SLC25A10;nc|ENSG00000183048|Q9UBX3-2|SLC25A10	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.393798828125	2	648.395348	1294.77614	0.94474	0.00061257	-4.4698	-0.0028982	-3.5251	-0.0022856	648.3923298671006	107.11	0.98898	107.2	106.69	107.68	0.091255					92	23	4	0	0	0	0.63176	2	11477	11477;11548		40.778	6.8565	1	51640000			48984	7497	32895	32908	55338;55339	55338					0.14054504144905877
RLIPHTVLTFV	11	Unmodified	_RLIPHTVLTFV_					0	0	0		ENST00000574129.5_1_17:79680521-79687104:+|nuORF;ENSG00000183048|ENST00000350690|SLC25A10;nc|ENSG00000183048|Q9UBX3-2|SLC25A10	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3927001953125	2	648.395348	1294.77614	-1.1413	-0.00074	-2.9648	-0.0019224	-4.1061	-0.0026624	648.3933115061765	106.13	0.94215	106.19	105.71	106.65	0.053757					81	22	4	0	0	0	0.63176	2	11282	11270;11282		40.778	9.2484	1	40329000			48985	7497	32895	32908	55340;55341	55341					0.14054504144905877
RLIPHTVLTFV	11	Unmodified	_RLIPHTVLTFV_					0	0	0		ENST00000574129.5_1_17:79680521-79687104:+|nuORF;ENSG00000183048|ENST00000350690|SLC25A10;nc|ENSG00000183048|Q9UBX3-2|SLC25A10	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3926391601562	2	648.395348	1294.77614	-1.1413	-0.00074001	-2.4279	-0.0015742	-3.5692	-0.0023142	648.3936534392657	107.12	0.99413	107.16	106.63	107.62	0.036118					92	23	4	0	0	0	0.69995	1	11402	11402		31.53	2.3598	1	53885000			48986	7497	32895	32908	55342	55342					0.14054504144905877
RLIPHTVLTFV	11	Unmodified	_RLIPHTVLTFV_					0	0	0		ENST00000574129.5_1_17:79680521-79687104:+|nuORF;ENSG00000183048|ENST00000350690|SLC25A10;nc|ENSG00000183048|Q9UBX3-2|SLC25A10	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	ENST00000574129.5_1_17:79680521-79687104:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.39453125	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.73893	1	12929	12929		24.519	0.99649	1	2297700			48987	7497	32895	32908	55343	55343					0.14054504144905877
RLIPRLCRVSP	11	Unmodified	_RLIPRLCRVSP_					0	0	0			REV__ENST00000327214.5_1_12:27091474-27091543:+|nuORF	REV__ENST00000327214.5_1_12:27091474-27091543:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26776123046875	3	437.267691	1308.78124	1.089	0.00047619	-0.88113	-0.00038529	0.20788	9.0897E-05	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.74771	1	4751	4751		22.562	0.78116	1	2745300	+		48988	25085	32896	32909	55344	55344					0.13920484735899663
RLIPTKLLVEE	11	Unmodified	_RLIPTKLLVEE_					0	0	0			REV__ENST00000204566.6_1_15:65255658-65255769:-|nuORF	REV__ENST00000204566.6_1_15:65255658-65255769:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.6027526855469	3	437.606255	1309.79694	-1.6248	-0.00071102	-2.4968	-0.0010926	-4.1216	-0.0018036	437.60506833777157	15.914	0.28422	15.962	15.857	16.141	0.047804					25	12	3	0	0	0	0.77803	1	98	98		15.921	1.8346	1	96678	+		48989	24096	32897	32910	55345	55345					0.1544304973394901
RLIQIAVV	8	Unmodified	_RLIQIAVV_					0	0	0			REV__nc|ENSG00000162551|P05186-2|ALPL	REV__nc|ENSG00000162551|P05186-2|ALPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.8084716796875	2	456.30547	910.596387	0.80667	0.00036809	-3.3976	-0.0015503	-2.5909	-0.0011822	456.30387685904844	21.656	0.83154	21.721	21.472	22.303	0.064745					40	29	2	0	0	0	0.86288	1	609	609		26.796	1.3459	1	22104	+		48990	20820	32898	32911	55346	55346					0.1375124492778923
RLIRDVGRHR	10	Unmodified	_RLIRDVGRHR_					0	0	0		ENSG00000084710|ENST00000403714|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B	ENSG00000084710|ENST00000403714|EFR3B	ENSG00000084710|ENST00000403714|EFR3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.594482421875	3	426.593566	1276.75887	-0.045125	-1.925E-05	2.4038	0.0010254	2.3587	0.0010062	426.5944815383962	33.374	1.1492	33.377	32.989	34.138	0.0030785					68	26	4	0	0	0	0.44803	1	1945	1945		47.228	0	1	379550			48991	1523	32899	32912	55347	55347					0.13156021382496874
RLISLREKHS	10	Unmodified	_RLISLREKHS_					0	0	0			REV__ENSG00000149929|ENST00000279392|HIRIP3	REV__ENSG00000149929|ENST00000279392|HIRIP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.86865234375	2	619.870028	1237.7255	1.2648	0.00078404	-2.3923	-0.0014829	-1.1274	-0.00069886	619.86841143733	93.879	2.9041	94.108	92.241	95.145	0.22863					217	69	4	0	0	0	0.67571	1	9662	9662		45.972	14.442	1	2572300	+		48992	20200	32900	32913	55348	55348					0.11614974819940471
RLISLREKHS	10	Unmodified	_RLISLREKHS_					0	0	0			REV__ENSG00000149929|ENST00000279392|HIRIP3	REV__ENSG00000149929|ENST00000279392|HIRIP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8690795898438	2	619.870028	1237.7255	1.7162	0.0010638	-2.4227	-0.0015017	-0.70652	-0.00043795	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.82886	1	11530	11530		37.812	2.6595	1	4719500	+		48993	20200	32900	32913	55349	55349					0.11614974819940471
RLISLREKHS	10	Unmodified	_RLISLREKHS_					0	0	0			REV__ENSG00000149929|ENST00000279392|HIRIP3	REV__ENSG00000149929|ENST00000279392|HIRIP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8684692382812	2	619.870028	1237.7255	0.5439	0.00033715	-1.617	-0.0010023	-1.0731	-0.00066519	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.85981	1	11323	11323		35.152	2.3396	1	1280900	+		48994	20200	32900	32913	55350	55350					0.11614974819940471
RLISPVPS	8	Unmodified	_RLISPVPS_					0	0	0			REV__ENST00000433593.6_1_3:145938690-145968784:-|nuORF	REV__ENST00000433593.6_1_3:145938690-145968784:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77984619140625	2	434.766178	867.517802	-0.16813	-7.3099E-05	-0.43834	-0.00019058	-0.60648	-0.00026368	434.76385097926817	41.463	0.19641	41.418	41.238	41.434	-0.045467					5	4	2	0	0	0	0.4196	1	2705	2705		21.96	1.013	1	18279	+		48995	26653	32901	32914	55351	55351					0.07874392622716186
RLISSSVL	8	Unmodified	_RLISSSVL_					0	0	0		ENST00000511154.5_1_19:54041514-54074864:+|nuORF	ENST00000511154.5_1_19:54041514-54074864:+|nuORF	ENST00000511154.5_1_19:54041514-54074864:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713623046875	2	437.77146	873.528367	-0.63876	-0.00027963	0.070293	3.0772E-05	-0.56847	-0.00024886	437.77162175664915	38.677	1.0193	39.199	38.87	39.89	0.52235					96	23	6	0	0	0	0.8347	1	3229	3229		23.042	2.0956	1	19739000			48996	13014	32902	32915	55352	55352					0.08654375277149029
RLITLRIEFG	10	Unmodified	_RLITLRIEFG_					0	0	0			REV__ENSG00000170537|ENST00000304381|TMC7	REV__ENSG00000170537|ENST00000304381|TMC7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5841979980469	3	406.583674	1216.72919	3.1308	0.0012729	-2.164	-0.00087985	0.96679	0.00039308	406.5827071519945	112.24	0.82966	112.27	112.06	112.89	0.030602					58	32	2	0	0	0	0.84763	1	13607	13607		17.833	0.6664	1	1459000	+		48997	21670	32903	32916	55353	55353					0.12949644593800258
RLITPNRG	8	Unmodified	_RLITPNRG_					0	0	0			REV__ENSG00000168702|ENST00000389484|LRP1B	REV__ENSG00000168702|ENST00000389484|LRP1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.7791748046875	2	463.780151	925.545748	-0.022801	-1.0575E-05	-2.19	-0.0010157	-2.2128	-0.0010263	463.77892097410154	39.841	0.70793	39.793	39.566	40.274	-0.04789					34	18	3	0	0	0	0.89962	1	2471	2471		38.806	1.647	1	282990	+		48998	21512	32904	32917	55354	55354					0.079997156028071
RLIVLTPKWV	10	Unmodified	_RLIVLTPKWV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.7088928222656	3	408.932414	1223.77541	0.22738	9.2984E-05	3.8029	0.0015551	4.0303	0.0016481	408.93443388036314	16.91	0.17369	16.299	16.213	16.386	-0.6107					6	3	2	0	0	0	0.37624	1	187	187		25.126	9.7929	1	18837	+		48999	23822	32905	32918	55355	55355					0.17247709495859453
RLKAWEAVPSL	11	Unmodified	_RLKAWEAVPSL_					0	0	0		nc|ENSG00000155846|Q86YN6-4|PPARGC1B;nc|ENSG00000155846|Q86YN6-3|PPARGC1B	nc|ENSG00000155846|Q86YN6-4|PPARGC1B	nc|ENSG00000155846|Q86YN6-4|PPARGC1B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8929443359375	2	635.36933	1268.72411	1.3584	0.00086309	-2.6806	-0.0017032	-1.3222	-0.00084012	635.3672874880103	105.79	0.43605	105.83	105.51	105.94	0.038322					12	10	2	0	0	0	0.17551	1	11537	11537		30.318	0	1	137600			49000	15009	32906	32919	55356	55356					0.10049340731166012
RLKAWEAVPSL	11	Unmodified	_RLKAWEAVPSL_					0	0	0		nc|ENSG00000155846|Q86YN6-4|PPARGC1B;nc|ENSG00000155846|Q86YN6-3|PPARGC1B	nc|ENSG00000155846|Q86YN6-4|PPARGC1B	nc|ENSG00000155846|Q86YN6-4|PPARGC1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8927612304688	2	635.36933	1268.72411	-1.1741	-0.000746	-3.8338	-0.0024359	-5.0079	-0.0031819	635.3654556247214	105.79	0.23677	105.87	105.76	106	0.073112					9	5	3	0	0	0	0.16388	1	11223	11223		30.318	0	1	137860			49001	15009	32906	32919	55357	55357					0.10049340731166012
RLKEELSKSL	10	Unmodified	_RLKEELSKSL_					0	0	0			REV__ENSG00000101327|ENST00000217305|PDYN	REV__ENSG00000101327|ENST00000217305|PDYN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.8582153320312	2	601.858795	1201.70304	-0.24099	-0.00014504	-1.5802	-0.00095104	-1.8212	-0.0010961	601.8577844533773	103.4	2.3202	103.45	103.07	105.39	0.041481					122	55	4	0	0	0	0.86698	1	11308	11308		28.081	1.3886	1	1412200	+		49002	17266	32907	32920	55358	55358					0.11025330631650831
RLKEELSKSL	10	Unmodified	_RLKEELSKSL_					0	0	0			REV__ENSG00000101327|ENST00000217305|PDYN	REV__ENSG00000101327|ENST00000217305|PDYN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	601.8587036132812	2	601.858795	1201.70304	0.90226	0.00054303	-2.5932	-0.0015607	-1.6909	-0.0010177	601.8571228928912	103.35	2.581	103.48	103.09	105.68	0.12622					132	64	4	0	0	0	0.77314	2	10950	10901;10950		40.778	3.6039	1	2471100	+		49003	17266	32907	32920	55359;55360	55360					0.11025330631650831
RLKEELSKSL	10	Unmodified	_RLKEELSKSL_					0	0	0			REV__ENSG00000101327|ENST00000217305|PDYN	REV__ENSG00000101327|ENST00000217305|PDYN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	601.8577270507812	2	601.858795	1201.70304	-1.2832	-0.00077232	-0.42174	-0.00025383	-1.705	-0.0010262	601.8583669122717	103.38	2.0705	103.5	103.11	105.18	0.11494					139	51	4	0	0	0	0.85834	1	10855	10855		22.58	0	1	2503700	+		49004	17266	32907	32920	55361	55361					0.11025330631650831
RLKFYRKKWRQ	11	Unmodified	_RLKFYRKKWRQ_					0	0	0			REV__nc|ENSG00000102780|Q86XP1-2|DGKH	REV__nc|ENSG00000102780|Q86XP1-2|DGKH	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.2496948242188	3	536.991438	1607.95248	0.045994	2.4698E-05	0.51812	0.00027823	0.56411	0.00030292	537.325995622774	51.064	0.31264	51.04	50.925	51.238	-0.02343					10	8	2	0	0	0	0.18408	1	4469	4469		3.4087	3.4087	1	33077	+		49005	17354	32908	32921	55362	55362					0.17282558098713707
RLKGMFIR	8	Unmodified	_RLKGMFIR_					0	0	0		nc|ENSG00000142687|Q8IZA0-2|KIAA0319L;ENSG00000142687|ENST00000325722|KIAA0319L;nc|ENSG00000142687|Q8IZA0-3|KIAA0319L;ENST00000485551.5_1_1:35906621-35936502:-|nuORF	nc|ENSG00000142687|Q8IZA0-2|KIAA0319L	nc|ENSG00000142687|Q8IZA0-2|KIAA0319L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8118591308594	2	510.810396	1019.60624	4.704	0.0024028	0.37654	0.00019234	5.0805	0.0025952	510.81038527976574	106.02	0.73642	106.21	105.87	106.6	0.18647					70	29	3	0	0	0	0.91005	1	12982	12982		42.474	8.3019	1	1170500			49006	4581	32909	32922	55363	55363					0.09722109661527156
RLKICYFMRYW	11	Unmodified	_RLKICYFMRYW_					0	0	0		nc|ENSG00000152689|Q8IV61-2|RASGRP3;ENSG00000152689|ENST00000403687|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3234252929688	3	526.940587	1577.79993	0.41021	0.00021615	1.3038	0.00068701	1.714	0.00090317	527.2750307449446	54.338	0.40217	54.42	54.212	54.615	0.081528					15	10	2	0	0	0	0.18318	1	4506	4506		6.001	0.30226	1	101700			49007	5194	32910	32923	55364	55364					0.03414278315449337
RLKICYFMRYW	11	Unmodified	_RLKICYFMRYW_					0	0	0		nc|ENSG00000152689|Q8IV61-2|RASGRP3;ENSG00000152689|ENST00000403687|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	526.940587	1577.79993	-1.2857	-0.00067748	3.9141	0.0020625	2.6284	0.001385	527.2769985737257	54.424	0.54789	54.424	54.144	54.692	0	0.084187	0.0018119	NaN	6.001	24	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65745			49008	5194	32910	32923							0.03414278315449337
RLKICYFMRYW	11	Unmodified	_RLKICYFMRYW_					0	0	0		nc|ENSG00000152689|Q8IV61-2|RASGRP3;ENSG00000152689|ENST00000403687|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	526.940587	1577.79993	0.019294	1.0167E-05	2.4606	0.0012966	2.4799	0.0013067	526.9421934345263	54.375	0.30952	54.367	54.193	54.503	-0.0073853	0.027957	-0.00048583	NaN	6.001	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87210			49009	5194	32910	32923							0.03414278315449337
RLKICYFMRYW	11	Unmodified	_RLKICYFMRYW_					0	0	0		nc|ENSG00000152689|Q8IV61-2|RASGRP3;ENSG00000152689|ENST00000403687|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	526.940587	1577.79993	-0.10687	-5.6313E-05	2.626	0.0013837	2.5191	0.0013274	527.2758972840819	54.284	0.30558	54.258	54.062	54.368	-0.025955	-0.080979	-0.00022441	NaN	6.001	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69326			49010	5194	32910	32923							0.03414278315449337
RLKICYFMRYW	11	Unmodified	_RLKICYFMRYW_					0	0	0		nc|ENSG00000152689|Q8IV61-2|RASGRP3;ENSG00000152689|ENST00000403687|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	nc|ENSG00000152689|Q8IV61-2|RASGRP3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	526.940587	1577.79993	-0.32823	-0.00017296	2.9698	0.0015649	2.6415	0.0013919	526.942325613892	54.277	0.33654	54.228	53.986	54.323	-0.049274	-0.11169	0.00031912	NaN	6.001	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92196			49011	5194	32910	32923							0.03414278315449337
RLKILLVI	8	Unmodified	_RLKILLVI_					0	0	0			REV__ENST00000461249.1_1_2:27852141-27855513:+|nuORF	REV__ENST00000461249.1_1_2:27852141-27855513:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.77410888671875	2	484.354963	966.695373	0.80494	0.00038988	-1.9746	-0.0009564	-1.1696	-0.00056652	484.35384875342805	19.132	0.89103	18.662	18.365	19.256	-0.46967					26	19	2	0	0	0	0.4196	1	469	469		14.664	0	1	62400	+		49012	27024	32911	32924	55365	55365					0.21069267892698917
RLKILLVI	8	Unmodified	_RLKILLVI_					0	0	0			REV__ENST00000461249.1_1_2:27852141-27855513:+|nuORF	REV__ENST00000461249.1_1_2:27852141-27855513:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	484.354963	966.695373	0.066129	3.203E-05	-0.60267	-0.00029191	-0.53654	-0.00025988	484.35433674334627	18.609	0.092415	18.676	18.621	18.713	0.066298	0.0092233	0.00074625	NaN	14.664	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53996	+		49013	27024	32911	32924							0.21069267892698917
RLKILLVI	8	Unmodified	_RLKILLVI_					0	0	0			REV__ENST00000461249.1_1_2:27852141-27855513:+|nuORF	REV__ENST00000461249.1_1_2:27852141-27855513:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	484.354963	966.695373	-0.17647	-8.5475E-05	-0.77882	-0.00037723	-0.9553	-0.0004627	484.3543146627831	19.291	0.77006	18.661	18.444	19.214	-0.6296	-0.005232	0.0005756	NaN	14.664	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91888	+		49014	27024	32911	32924							0.21069267892698917
RLKILSTFIPN	11	Unmodified	_RLKILSTFIPN_					0	0	0		ENST00000464863.1_1_6:32825734-32826344:+|nuORF	ENST00000464863.1_1_6:32825734-32826344:+|nuORF	ENST00000464863.1_1_6:32825734-32826344:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7529296875	3	434.602845	1300.78671	-0.95188	-0.00041369	-2.3199	-0.0010082	-3.2718	-0.0014219	434.9364669866212	61.743	0.1364	62.132	62.047	62.184	0.38846					4	2	2	0	0	0	0.17882	1	6585	6585		15.921	5.3588	1	26213			49015	12099	32912	32925	55366	55366					0.14834486799372826
RLKKKRFKL	9	Unmodified	_RLKKKRFKL_					0	0	0			REV__ENSG00000099381|ENST00000262519|SETD1A	REV__ENSG00000099381|ENST00000262519|SETD1A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2979736328125	3	406.28367	1215.82918	0.17652	7.1718E-05	0.16805	6.8277E-05	0.34457	0.00013999	406.28367324852456	71.915	1.2052	72.301	71.712	72.917	0.38545					43	28	2	0	0	0	0.20789	1	7989	7989		25.574	0	1	103600	+		49016	17094	32913	32926	55367	55367					0.22989926718264542
RLKKKVKT	8	Unmodified	_RLKKKVKT_					0	0	0			REV__ENSG00000134899|ENST00000652225|ERCC5	REV__ENSG00000134899|ENST00000652225|ERCC5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.8006591796875	2	500.853119	999.691684	0.12589	6.3054E-05	-2.081	-0.0010423	-1.9551	-0.00097923	500.8507841372745	18.967	0.3829	18.49	18.264	18.647	-0.47694					10	8	2	0	0	0	0.4196	1	462	462		11.511	3.8207	1	19537	+		49017	19175	32914	32927	55368	55368					0.19182598118834449
RLKKVPAKKLV	11	Unmodified	_RLKKVPAKKLV_					0	0	0		ENST00000409410.6_3_19:38826782-38827079:+|nuORF	ENST00000409410.6_3_19:38826782-38827079:+|nuORF	ENST00000409410.6_3_19:38826782-38827079:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.30291748046875	3	427.30273	1278.88636	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.95	1	83.381	82.881	83.881	0.43108								0	0	0	0.56276	1	9610	9610		13.508	3.8618	1				49018	11308	32915	32928	55369	55369					0.2580734920395571
RLKKVPAKKLV	11	Unmodified	_RLKKVPAKKLV_					0	0	0		ENST00000409410.6_3_19:38826782-38827079:+|nuORF	ENST00000409410.6_3_19:38826782-38827079:+|nuORF	ENST00000409410.6_3_19:38826782-38827079:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3030700683594	3	427.30273	1278.88636	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.031	1	83.462	82.962	83.962	0.43108								0	0	0	0.56276	1	9622	9622		18.531	4.445	1				49019	11308	32915	32928	55370	55370					0.2580734920395571
RLKLKDGN	8	Unmodified	_RLKLKDGN_					0	0	0		ENSG00000006432|ENST00000554752|MAP3K9;nc|ENSG00000006432|P80192-4|MAP3K9	ENSG00000006432|ENST00000554752|MAP3K9	ENSG00000006432|ENST00000554752|MAP3K9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.288818359375	2	472.287808	942.561064	2.1484	0.0010146	-2.0454	-0.000966	0.103	4.8644E-05	472.28673091824714	113.99	1.2395	114.01	113.14	114.38	0.020027					83	56	2	0	0	0	0.8347	1	13780	13780		23.042	3.6825	1	98727			49020	698	32916	32929	55371	55371					0.0874858239999412
RLKLVSNN	8	Unmodified	_RLKLVSNN_					0	0	0			REV__ENSG00000173769|ENST00000309765|TOPAZ1	REV__ENSG00000173769|ENST00000309765|TOPAZ1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2892761230469	2	472.287808	942.561064	-0.91361	-0.00043149	1.3293	0.00062781	0.41567	0.00019632	472.2883987984471	99.414	1.6316	99.414	99.097	100.73	0					84	38	3	0	0	0	0.84341	1	10160	10160		24.203	0	1	360760	+		49021	21950	32917	32930	55372	55372					0.0874858239999412
RLKQIEEQTKK	11	Unmodified	_RLKQIEEQTKK_					0	0	0		ENSG00000147065|ENST00000360270|MSN;ENST00000511640.1_1_5:25909808-25910855:+|nuORF	ENSG00000147065|ENST00000360270|MSN	ENSG00000147065|ENST00000360270|MSN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.61199951171875	3	467.612181	1399.81471	0.36596	0.00017113	-0.29325	-0.00013713	0.072713	3.4001E-05	467.6119757672096	19.472	0.51221	19.003	18.79	19.303	-0.46967					32	10	4	0	0	0	0.69331	1	514	514		32.616	10.054	1	174850			49022	4878	32918	32931	55373	55373					0.1307976498876542
RLKQIEEQTKK	11	Unmodified	_RLKQIEEQTKK_					0	0	0		ENSG00000147065|ENST00000360270|MSN;ENST00000511640.1_1_5:25909808-25910855:+|nuORF	ENSG00000147065|ENST00000360270|MSN	ENSG00000147065|ENST00000360270|MSN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.61224365234375	3	467.612181	1399.81471	-0.29352	-0.00013725	0.45704	0.00021372	0.16352	7.6463E-05	467.61227571321893	19.647	0.41233	19.017	18.847	19.259	-0.62961					24	8	4	0	0	0	0.58516	2	554	546;554		45.908	18.264	1	248650			49023	4878	32918	32931	55374;55375	55375					0.1307976498876542
RLKRKGLVKK	10	Unmodified	_RLKRKGLVKK_					0	0	0		ENST00000379707.7_1_9:33255219-33262163:-|nuORF;nc|ENSG00000107262|Q99933-4|BAG1;nc|ENSG00000107262|Q99933-3|BAG1;ENSG00000107262|ENST00000634734|BAG1;ENST00000493917.5_1_9:33248401-33256801:-|nuORF	ENST00000379707.7_1_9:33255219-33262163:-|nuORF	ENST00000379707.7_1_9:33255219-33262163:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	409.29248046875	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.073	1	19.144	18.644	19.644	0.070713								0	0	0	0.45132	1	397	397		4.3388	0.4954	1				49024	2338	32919	32932	55376	55376					0.2472131174695278
RLKRKGLVKK	10	Unmodified	_RLKRKGLVKK_					0	0	0		ENST00000379707.7_1_9:33255219-33262163:-|nuORF;nc|ENSG00000107262|Q99933-4|BAG1;nc|ENSG00000107262|Q99933-3|BAG1;ENSG00000107262|ENST00000634734|BAG1;ENST00000493917.5_1_9:33248401-33256801:-|nuORF	ENST00000379707.7_1_9:33255219-33262163:-|nuORF	ENST00000379707.7_1_9:33255219-33262163:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	409.2913818359375	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.895	1	18.872	18.372	19.372	-0.023342								0	0	0	0.45132	1	378	378		4.0829	0.46384	1				49025	2338	32919	32932	55377	55377					0.2472131174695278
RLKRVFVKYER	11	Unmodified	_RLKRVFVKYER_					0	0	0			REV__ENST00000466614.1_1_22:30983271-30987820:-|nuORF	REV__ENST00000466614.1_1_22:30983271-30987820:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.76312255859375	3	498.640294	1492.89905	0.12606	6.2858E-05	-2.3938	-0.0011937	-2.2678	-0.0011308	498.638946880861	19.426	0.50871	18.956	18.7	19.209	-0.46967					17	10	2	0	0	0	0.17784	1	526	526		28.577	19.777	1	35285	+		49026	17126	32920	32933	55378	55378					0.1723176059620073
RLKSDVHKAIL	11	Unmodified	_RLKSDVHKAIL_					0	0	0			REV__nc|ENSG00000139842|Q13619-2|CUL4A	REV__nc|ENSG00000139842|Q13619-2|CUL4A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.8919677734375	2	640.395879	1278.7772	-0.69345	-0.00044408	-3.5831	-0.0022946	-4.2765	-0.0027387	640.3933606010097	53.872	1.0072	53.872	53.507	54.514	0					69	30	3	0	0	0	0.6493	1	4512	4512		38.754	8.1847	1	206080	+		49027	19575	32921	32934	55379	55379					0.1489671851386447
RLKSVVDKS	9	Unmodified	_RLKSVVDKS_					0	0	0			REV__ENSG00000224051|ENST00000343938|CPTP	REV__ENSG00000224051|ENST00000343938|CPTP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.314697265625	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12759	12759		21.96	1.013	1	4038100	+		49028	23730	32922	32935	55380	55380					0.09941120742928433
RLKWLPPS	8	Unmodified	_RLKWLPPS_					0	0	0		ENST00000260276.7_1_11:111750228-111753254:+|nuORF	ENST00000260276.7_1_11:111750228-111753254:+|nuORF	ENST00000260276.7_1_11:111750228-111753254:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.8034362792969	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.88915	1	4242	4242		35.201	1.6851	1	2538600			49029	9384	32923	32936	55381	55381					0.09366360785031702
RLLAFLSLLAL	11	Unmodified	_RLLAFLSLLAL_					0	0	0		ENSG00000188770|ENST00000367222|OPTC	ENSG00000188770|ENST00000367222|OPTC	ENSG00000188770|ENST00000367222|OPTC	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.4055786132812	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.27	1	50.3	49.8	50.8	0.029629								0	0	0	0.56276	1	3939	3939		19.997	0	1				49030	7957	32924	32937	55382	55382					0.1854857629309663
RLLAKLRAI	9	Unmodified	_RLLAKLRAI_					0	0	0		ENSG00000248712|ENST00000503566|CCDC153;nc|ENSG00000248712|Q494R4-2|DRC12;ENST00000375140.7_1_11:119061011-119064134:-|nuORF	ENSG00000248712|ENST00000503566|CCDC153	ENSG00000248712|ENST00000503566|CCDC153	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.75537109375	2	527.366393	1052.71823	0.28938	0.00015261	-2.9503	-0.0015559	-2.6609	-0.0014033	527.3647971921902	20.109	0.81632	19.48	19.214	20.03	-0.6296					23	17	2	0	0	0	0.20789	1	679	679		7.1934	0	1	59750			49031	8831	32925	32938	55383	55383					0.1939828701015358
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3076477050781	3	478.973384	1433.89832	-1.6788	-0.00080411	3.2689	0.0015657	1.5901	0.0007616	479.3090926937771	44.658	1.9564	44.658	43.823	45.779	0					118	47	4	0	0	0	0.7896	3	3229	3229;3293;3361		13.508	4.2961	1	394570	+		49032	16685	32926	32939	55384;55385;55386	55384					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.30474853515625	3	478.973384	1433.89832	-1.6535	-0.00079198	3.9148	0.0018751	2.2613	0.0010831	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.81021	1	3595	3595		9.2118	3.2108	1	252010	+		49033	16685	32926	32939	55387	55387					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.97637939453125	3	478.973384	1433.89832	-1.6306	-0.00078103	4.3048	0.0020619	2.6742	0.0012809	478.97540943407233	47.987	1.2617	47.987	47.56	48.821	0					77	38	3	0	0	0	0.78683	1	3692	3692		14.086	5.2867	1	195490	+		49034	16685	32926	32939	55388	55388					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9734802246094	3	478.973384	1433.89832	-1.6051	-0.0007688	3.9699	0.0019015	2.3648	0.0011327	478.9751768575692	49.706	2.3794	49.706	48.538	50.918	0					127	57	3	0	0	0	0.76579	2	3909	3909;4029		18.531	4.445	1	134370	+		49035	16685	32926	32939	55389;55390	55389					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9737548828125	3	478.973384	1433.89832	-1.5808	-0.00075714	4.0254	0.0019281	2.4447	0.0011709	478.9752399041666	51.639	1.4994	51.639	50.814	52.314	0					68	39	2	0	0	0	0.78683	2	4147	4147;4160		14.086	5.6788	1	107410	+		49036	16685	32926	32939	55391;55392	55391					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.30816650390625	3	478.973384	1433.89832	0.22007	0.00010541	1.4347	0.00068717	1.6548	0.00079258	478.9740845349807	44.981	2.0928	44.958	43.729	45.822	-0.023079					123	48	4	0	0	0	0.76251	1	3537	3537		19.263	1.4295	1	463950	+		49037	16685	32926	32939	55393	55393					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.30767822265625	3	478.973384	1433.89832	0.1614	7.7307E-05	2.071	0.00099196	2.2324	0.0010693	478.974258997061	46.621	1.762	46.607	45.625	47.387	-0.013821					99	45	3	0	0	0	0.78683	1	3714	3714		14.086	6.0517	1	179760	+		49038	16685	32926	32939	55394	55394					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3090515136719	3	478.973384	1433.89832	0.11282	5.404E-05	2.5878	0.0012395	2.7006	0.0012935	478.9744667412385	47.884	1.3902	47.875	47.036	48.427	-0.0093231					71	41	3	0	0	0	0.78683	4	3929	3929;3941;3959;3981		14.086	4.4399	1	396300	+		49039	16685	32926	32939	55395;55396;55397;55398	55395					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9733581542969	3	478.973384	1433.89832	0.065395	3.1322E-05	2.2352	0.0010706	2.3006	0.0011019	478.9743761165068	49.154	1.8702	49.148	48.387	50.257	-0.0056381					110	43	3	0	0	0	0.76579	2	4212	4212;4228		18.531	9.3192	1	187140	+		49040	16685	32926	32939	55399;55400	55399					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9748840332031	3	478.973384	1433.89832	-0.022494	-1.0774E-05	2.5633	0.0012277	2.5408	0.001217	478.9744999510038	52.877	2.746	52.874	51.525	54.271	-0.0033035					162	72	3	0	0	0	0.84494	2	4494	4494;4600		6.3209	0.31984	1	150480	+		49041	16685	32926	32939	55401;55402	55401					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3077392578125	3	478.973384	1433.89832	-0.72158	-0.00034562	3.2574	0.0015602	2.5358	0.0012146	478.97494935068806	47.94	1.1198	47.915	47.673	48.793	-0.025326					45	28	2	0	0	0	0.81021	1	4031	4031		9.2118	0.41249	1	261310	+		49042	16685	32926	32939	55403	55403					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9732360839844	3	478.973384	1433.89832	-1.9678	-0.00094254	3.1251	0.0014969	1.1573	0.00055432	479.30912300096907	43.377	1.5252	43.377	42.724	44.249	0.00016785					100	36	3	0	0	0	0.76892	1	3299	3299		17.833	5.4003	1	374940	+		49043	16685	32926	32939	55404	55404					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3086242675781	3	478.973384	1433.89832	-1.3068	-0.00062591	3.7757	0.0018085	2.469	0.0011826	478.9750986281663	49.151	3.7005	49.151	47.803	51.503	0.00016785					187	96	3	0	0	0	0.78683	1	4099	4099		14.086	1.6532	1	240410	+		49044	16685	32926	32939	55405	55405					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.97601318359375	3	478.973384	1433.89832	-1.3988	-0.00066997	3.7123	0.0017781	2.3136	0.0011081	478.9750520037149	52.203	1.7713	52.215	51.267	53.038	0.012436					94	42	3	0	0	0	0.80813	2	4577	4577;4594		9.6461	3.3253	1	183680	+		49045	16685	32926	32939	55406;55407	55406					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.30877685546875	3	478.973384	1433.89832	-0.90815	-0.00043498	3.264	0.0015634	2.3558	0.0011284	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.7896	2	3421	3373;3421		13.508	7.5069	1	368580	+		49046	16685	32926	32939	55408;55409	55409					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.308837890625	3	478.973384	1433.89832	-0.90027	-0.0004312	3.5043	0.0016784	2.604	0.0012472	479.3094231457841	50.589	1.3321	50.619	49.948	51.28	0.029629					91	40	3	0	0	0	0.78683	1	3897	3897		14.086	0.57807	1	250790	+		49047	16685	32926	32939	55410	55410					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97735595703125	3	478.973384	1433.89832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.627	1	45.639	45.139	46.139	0.012058								0	0	0	0.56276	1	3298	3298		14.086	6.4066	1		+		49048	16685	32926	32939	55411	55411					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.974853515625	3	478.973384	1433.89832	0.29105	0.00013941	2	0.00095795	2.2911	0.0010974	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.81021	1	3349	3349		9.2118	0	1	395190	+		49049	16685	32926	32939	55412	55412					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.30572509765625	3	478.973384	1433.89832	0.30578	0.00014646	2.3764	0.0011382	2.6822	0.0012847	478.97445511920006	47.863	1.3107	47.901	47.243	48.554	0.037731					72	41	3	0	0	0	0.76251	2	3600	3600;3659		19.263	10.855	1	244030	+		49050	16685	32926	32939	55413;55414	55413					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97186279296875	3	478.973384	1433.89832	0.32204	0.00015425	2.3016	0.0011024	2.6237	0.0012567	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.80813	1	3724	3724		9.6461	0	1	307830	+		49051	16685	32926	32939	55415	55415					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.30523681640625	3	478.973384	1433.89832	0.41435	0.00019846	1.9079	0.00091386	2.3223	0.0011123	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.80593	3	5177	5132;5177;5193		10.104	4.1029	1	131420	+		49052	16685	32926	32939	55416;55417;55418	55417					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9747314453125	3	478.973384	1433.89832	-0.25402	-0.00012167	2.9951	0.0014346	2.741	0.0013129	478.9747709878051	47.62	1.4426	47.532	47.242	48.685	-0.087646					53	40	2	0	0	0	0.78391	1	3609	3609		14.694	5.0475	1	370120	+		49053	16685	32926	32939	55419	55419					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9748229980469	3	478.973384	1433.89832	-0.315	-0.00015088	2.7524	0.0013183	2.4374	0.0011675	478.9746652956354	49.514	1.8124	49.42	48.44	50.252	-0.093178					109	43	3	0	0	0	0.80813	1	3908	3908		9.6461	1.2389	1	294110	+		49054	16685	32926	32939	55420	55420					0.19872965947160992
RLLALFKRVRY	11	Unmodified	_RLLALFKRVRY_					0	0	0			REV__ENSG00000073969|ENST00000398238|NSF	REV__ENSG00000073969|ENST00000398238|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97467041015625	3	478.973384	1433.89832	-0.41434	-0.00019846	3.0207	0.0014469	2.6064	0.0012484	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.7896	4	4142	4142;4199;4206;4267		13.508	3.8618	1	341610	+		49055	16685	32926	32939	55421;55422;55423;55424	55421					0.19872965947160992
RLLCLGQLH	9	Unmodified	_RLLCLGQLH_					0	0	0		nc|ENSG00000177674|Q6RW13-4|AGTRAP;nc|ENSG00000177674|Q6RW13-3|AGTRAP;nc|ENSG00000177674|Q6RW13-5|AGTRAP	nc|ENSG00000177674|Q6RW13-4|AGTRAP	nc|ENSG00000177674|Q6RW13-4|AGTRAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.80859375	2	526.805311	1051.59607	3.1222	0.0016448	2.0164	0.0010623	5.1386	0.002707	526.8062549875466	101.13	2.204	101.08	100.09	102.29	-0.052116					131	51	4	0	0	0	0.43338	1	10980	10980		55.504	9.5523	1	2494300			49056	15117	32927	32940	55425	55425					0.07233501936298126
RLLCLGQLH	9	Unmodified	_RLLCLGQLH_					0	0	0		nc|ENSG00000177674|Q6RW13-4|AGTRAP;nc|ENSG00000177674|Q6RW13-3|AGTRAP;nc|ENSG00000177674|Q6RW13-5|AGTRAP	nc|ENSG00000177674|Q6RW13-4|AGTRAP	nc|ENSG00000177674|Q6RW13-4|AGTRAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8074951171875	2	526.805311	1051.59607	2.0214	0.0010649	2.0707	0.0010909	4.0921	0.0021558	526.8066755630937	97.885	1.3091	98.27	97.24	98.549	0.38548					64	31	4	0	0	0	0.28875	1	11798	11798		65.803	1.5959	1	2611300			49057	15117	32927	32940	55426	55426					0.07233501936298126
RLLCLGQLH	9	Unmodified	_RLLCLGQLH_					0	0	0		nc|ENSG00000177674|Q6RW13-4|AGTRAP;nc|ENSG00000177674|Q6RW13-3|AGTRAP;nc|ENSG00000177674|Q6RW13-5|AGTRAP	nc|ENSG00000177674|Q6RW13-4|AGTRAP	nc|ENSG00000177674|Q6RW13-4|AGTRAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8079833984375	2	526.805311	1051.59607	1.8843	0.00099267	2.449	0.0012902	4.3333	0.0022828	526.806675241247	99.062	1.2342	99.425	98.602	99.837	0.36292					102	30	5	0	0	0	0.39977	1	11922	11922		57.811	2.3071	1	32274000			49058	15117	32927	32940	55427	55427					0.07233501936298126
RLLCLGQLH	9	Unmodified	_RLLCLGQLH_					0	0	0		nc|ENSG00000177674|Q6RW13-4|AGTRAP;nc|ENSG00000177674|Q6RW13-3|AGTRAP;nc|ENSG00000177674|Q6RW13-5|AGTRAP	nc|ENSG00000177674|Q6RW13-4|AGTRAP	nc|ENSG00000177674|Q6RW13-4|AGTRAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8084716796875	2	526.805311	1051.59607	2.4511	0.0012913	1.6759	0.00088286	4.127	0.0021741	526.8063545435555	100.49	2.2675	100.83	100.38	102.64	0.34591					144	58	4	0	0	0	0.25826	2	12198	12186;12198		68.485	2.5872	1	37709000			49059	15117	32927	32940	55428;55429	55429					0.07233501936298126
RLLDHRDSVE	10	Unmodified	_RLLDHRDSVE_					0	0	0		ENSG00000137070|ENST00000441545|IL11RA;nc|ENSG00000137070|Q14626-2|IL11RA	ENSG00000137070|ENST00000441545|IL11RA	ENSG00000137070|ENST00000441545|IL11RA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9327392578125	3	413.886192	1238.63675	-1.8945	-0.00078409	3.2959	0.0013641	1.4015	0.00058006	413.88734666306067	43.773	0.31844	43.781	43.605	43.923	0.0084534					10	7	2	0	0	0	0.37624	1	3052	3052		9.6461	0	1	90938			49060	4168	32928	32941	55430	55430					0.0269751478958824
RLLDYVVNI	9	Unmodified	_RLLDYVVNI_					0	0	0		nc|ENSG00000197256|Q63ZY3-3|KANK2;ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8259887695312	2	552.824224	1103.63389	0.64746	0.00035793	-0.51514	-0.00028478	0.13232	7.315E-05	552.8237799511401	77.799	0.7224	77.936	77.632	78.354	0.13667					62	25	3	0	0	0	0.51592	1	7317	7317		51.193	9.7661	1	521170			49061	8148	32929	32942	55431	55431					0.08622291402753035
RLLEALQLSLP	11	Unmodified	_RLLEALQLSLP_					0	0	0		ENSG00000047648|ENST00000337414|ARHGAP6;nc|ENSG00000047648|O43182-4|ARHGAP6;nc|ENSG00000047648|O43182-2|ARHGAP6;nc|ENSG00000047648|O43182-5|ARHGAP6;nc|ENSG00000047648|O43182-3|ARHGAP6;ENST00000489330.6_1_X:11166772-11683098:-|nuORF	ENSG00000047648|ENST00000337414|ARHGAP6	ENSG00000047648|ENST00000337414|ARHGAP6	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.2622375488281	3	418.258967	1251.75507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.371	1	58.481	57.981	58.981	0.11027								0	0	0	0.56276	1	4974	4974		38.714	3.2184	1				49062	967	32930	32943	55432	55432					0.13926494045426807
RLLEIALGF	9	Unmodified	_RLLEIALGF_					0	0	0		ENSG00000166147|ENST00000316623|FBN1;ENST00000558230.1_1_15:48935234-48936966:-|nuORF	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3174438476562	2	516.316035	1030.61752	-0.2877	-0.00014854	-0.13005	-6.7148E-05	-0.41775	-0.00021569	516.3159037753348	84.02	1.328	84.185	83.926	85.255	0.1651					41	30	2	0	0	0	0.69624	1	8180	8180		40.778	1.7567	1	291560			49063	6162	32931	32944	55433	55433					0.10343210236646883
RLLEIALGF	9	Unmodified	_RLLEIALGF_					0	0	0		ENSG00000166147|ENST00000316623|FBN1;ENST00000558230.1_1_15:48935234-48936966:-|nuORF	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3169555664062	2	516.316035	1030.61752	0.66914	0.00034549	-1.002	-0.00051733	-0.33283	-0.00017185	516.3153400716644	84.185	0.72745	84.333	83.962	84.69	0.14793					37	16	3	0	0	0	0.35373	1	8195	8195		60.972	15.02	1	242850			49064	6162	32931	32944	55434	55434					0.10343210236646883
RLLEIALGF	9	Unmodified	_RLLEIALGF_					0	0	0		ENSG00000166147|ENST00000316623|FBN1;ENST00000558230.1_1_15:48935234-48936966:-|nuORF	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3173217773438	2	516.316035	1030.61752	-1.4284	-0.00073751	1.0963	0.00056603	-0.33212	-0.00017148	516.316409958008	84.135	0.73714	84.273	83.961	84.698	0.13811					42	16	3	0	0	0	0.51307	1	8130	8130		51.335	1.3109	1	238630			49065	6162	32931	32944	55435	55435					0.10343210236646883
RLLERLVKKP	10	Unmodified	_RLLERLVKKP_					0	0	0			REV__nc|ENSG00000136305|Q9UHD4|CIDEB	REV__nc|ENSG00000136305|Q9UHD4|CIDEB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.4136962890625	2	626.416614	1250.81868	-1.255	-0.00078617	1.7559	0.0010999	0.50089	0.00031377	626.4175648209418	15.3	0.18611	15.3	15.194	15.38	0					17	8	3	0	0	0	0.8486	1	15	15		18.262	0	1	91826	+		49066	29871	32932	32945	55436	55436					0.20329899273156116
RLLERLVKKP	10	Unmodified	_RLLERLVKKP_					0	0	0			REV__nc|ENSG00000136305|Q9UHD4|CIDEB	REV__nc|ENSG00000136305|Q9UHD4|CIDEB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.4127197265625	2	626.416614	1250.81868	1.1813	0.00073998	-0.58855	-0.00036868	0.59273	0.0003713	626.4160523351012	15.305	0.12382	15.281	15.23	15.353	-0.024207					7	4	2	0	0	0	0.85958	1	20	20		15.642	0.77694	1	48251	+		49067	29871	32932	32945	55437	55437					0.20329899273156116
RLLERLVKKP	10	Unmodified	_RLLERLVKKP_					0	0	0			REV__nc|ENSG00000136305|Q9UHD4|CIDEB	REV__nc|ENSG00000136305|Q9UHD4|CIDEB	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	626.416614	1250.81868	-1.255	-0.00078617	1.7559	0.0010999	0.50089	0.00031377	626.4175648209418	15.3	0.18611	15.3	15.194	15.38	0	-0.030951	0.00040232	NaN	18.262	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91826	+		49068	29871	32932	32945							0.20329899273156116
RLLERLVKKP	10	Unmodified	_RLLERLVKKP_					0	0	0			REV__nc|ENSG00000136305|Q9UHD4|CIDEB	REV__nc|ENSG00000136305|Q9UHD4|CIDEB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	626.416614	1250.81868	0.20466	0.0001282	0.88861	0.00055664	1.0933	0.00068484	626.4162232115173	15.354	0.12549	15.412	15.369	15.494	0.057872	0.080872	-0.00068428	NaN	18.262	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36176	+		49069	29871	32932	32945							0.20329899273156116
RLLERLVKKP	10	Unmodified	_RLLERLVKKP_					0	0	0			REV__nc|ENSG00000136305|Q9UHD4|CIDEB	REV__nc|ENSG00000136305|Q9UHD4|CIDEB	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	626.416614	1250.81868	1.1813	0.00073998	-0.58855	-0.00036868	0.59273	0.0003713	626.4160523351012	15.305	0.12382	15.281	15.23	15.353	-0.024207	-0.049922	-0.0025349	NaN	18.262	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48251	+		49070	29871	32932	32945							0.20329899273156116
RLLESPTP	8	Unmodified	_RLLESPTP_					0	0	0		nc|ENSG00000167118|Q9BTM9-2|URM1	nc|ENSG00000167118|Q9BTM9-2|URM1	nc|ENSG00000167118|Q9BTM9-2|URM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7605895996094	2	456.761092	911.507631	-0.58705	-0.00026814	0.78678	0.00035937	0.19973	9.1227E-05	456.7612975873337	34.494	0.70835	34.5	34.154	34.862	0.0063934					37	16	3	0	0	0	0.79403	1	2115	2115		63.306	0	1	138490			49071	15073	32933	32946	55438	55438					0.04833784897471105
RLLFLLSLLH	10	Unmodified	_RLLFLLSLLH_					0	0	0		nc|ENSG00000111785|Q9NVN3-3|RIC8B;nc|ENSG00000111785|Q9NVN3|RIC8B;nc|ENSG00000111785|Q9NVN3-1|RIC8B;ENSG00000111785|ENST00000392837|RIC8B	nc|ENSG00000111785|Q9NVN3-3|RIC8B	nc|ENSG00000111785|Q9NVN3-3|RIC8B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.9316101074219	3	408.932414	1223.77541	0.24154	9.8775E-05	-2.6387	-0.001079	-2.3972	-0.00098027	408.93107439761843	28.345	0.78642	28.248	27.796	28.582	-0.096945					38	18	4	0	0	0	0.86225	1	1712	1712		32.751	3.1998	1	256810			49072	2612	32934	32947	55439	55439					0.17247709495904928
RLLFSVTLN	9	Unmodified	_RLLFSVTLN_					0	0	0			REV__nc|ENSG00000148204|Q5IJ48-3|CRB2	REV__nc|ENSG00000148204|Q5IJ48-3|CRB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8153686523438	2	531.818941	1061.62333	-0.69524	-0.00036974	-3.1977	-0.0017006	-3.8929	-0.0020703	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.69624	1	10100	10100		40.778	10.275	1	1296000	+		49073	29922	32935	32948	55440	55440					0.09498308748356976
RLLGLPRWRS	10	Unmodified	_RLLGLPRWRS_					0	0	0		ENST00000495019.5_2_3:125075950-125076085:-|nuORF	ENST00000495019.5_2_3:125075950-125076085:-|nuORF	ENST00000495019.5_2_3:125075950-125076085:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3848266601562	2	627.383106	1252.75166	-0.21902	-0.00013741	-0.8611	-0.00054024	-1.0801	-0.00067765	627.3824199275489	117.28	0.27765	117.21	117	117.28	-0.075302					26	9	4	0	0	0	0.85934	1	12571	12571		35.618	5.3006	1	4893700			49074	12761	32936	32949	55441	55441					0.1353928878206716
RLLHKEIGNK	10	Unmodified	_RLLHKEIGNK_					0	0	0			REV__nc|ENSG00000070669|P08243-3|ASNS	REV__nc|ENSG00000070669|P08243-3|ASNS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3670654296875	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.85834	1	12803	12803		22.58	0.61977	1	5984800	+		49075	16608	32937	32950	55442	55442					0.12459876308253115
RLLIHFRRIP	10	Unmodified	_RLLIHFRRIP_					0	0	0			REV__ENST00000335661.6_1_15:80263082-80263130:-|nuORF	REV__ENST00000335661.6_1_15:80263082-80263130:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7405090332031	3	440.950691	1319.83024	0.45293	0.00019972	2.76	0.001217	3.2129	0.0014167	440.95176730638434	68.751	0.57082	68.879	68.617	69.188	0.12839					29	21	2	0	0	0	0.37624	1	6209	6209		7.3997	0	1	70028	+		49076	25172	32938	32951	55443	55443					0.18312141087153577
RLLIKRLL	8	Unmodified	_RLLIKRLL_					0	0	0			REV__nc|ENSG00000050628|P43115-3|PTGER3	REV__nc|ENSG00000050628|P43115-3|PTGER3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8082885742188	2	512.871311	1023.72807	-0.3974	-0.00020382	-3.9051	-0.0020028	-4.3025	-0.0022066	513.370896054237	50.954	0.22422	50.989	50.851	51.076	0.034588					11	8	2	0	0	0	0.4196	1	4018	4018		1.4648	0	1	75917	+		49077	16378	32939	32952	55444	55444					0.2171547501556006
RLLKDLRIRFP	11	Unmodified	_RLLKDLRIRFP_					0	0	0		ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2253723144531	3	476.305022	1425.89324	0.5725	0.00027269	2.9114	0.0013867	3.4839	0.0016594	476.30667681701476	65.94	0.43761	66.326	66.11	66.547	0.38581					13	10	2	0	0	0	0.17835	1	7186	7186		21.78	11.677	1	122860			49078	4651	32940	32953	55445	55445					0.1973266208451605
RLLKHKKKHYK	11	Unmodified	_RLLKHKKKHYK_					0	0	0			REV__ENSG00000116539|ENST00000392403|ASH1L	REV__ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.6498107910156	3	493.652533	1477.93577	-1.6053	-0.00079248	-4.4432	-0.0021934	-6.0485	-0.0029859	493.6501931782481	44.56	1.836	44.56	43.623	45.459	0					138	44	4	0	0	0	0.79224	1	3245	3245		12.957	6.9564	1	434870	+		49079	18201	32941	32954	55446	55446					0.21592057212774307
RLLKHKKKHYK	11	Unmodified	_RLLKHKKKHYK_					0	0	0			REV__ENSG00000116539|ENST00000392403|ASH1L	REV__ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.64996337890625	3	493.652533	1477.93577	-2.0219	-0.0009981	-4.0798	-0.002014	-6.1017	-0.0030121	493.6504107120104	44.606	1.8952	44.602	43.855	45.75	-0.0041618					105	44	3	0	0	0	0.81021	2	3524	3467;3524		9.2118	4.156	1	507660	+		49080	18201	32941	32954	55447;55448	55448					0.21592057212774307
RLLKPIQRCNL	11	Unmodified	_RLLKPIQRCNL_					0	0	0			REV__ENSG00000104866|ENST00000221462|PPP1R37	REV__ENSG00000104866|ENST00000221462|PPP1R37	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9434509277344	3	451.943096	1352.80746	0.347	0.00015682	0.15946	7.2067E-05	0.50646	0.00022889	451.94308439808714	55.355	1.4573	55.446	54.835	56.292	0.091167					122	48	4	0	0	0	0.74405	1	4627	4627		23.378	1.5975	1	477300	+		49081	17483	32942	32955	55449	55449					0.14516753907400926
RLLKVGELRAV	11	Unmodified	_RLLKVGELRAV_					0	0	0			REV__ENSG00000131386|ENST00000339732|GALNT15	REV__ENSG00000131386|ENST00000339732|GALNT15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.603515625	3	418.60659	1252.79794	-1.7442	-0.00073012	-2.6386	-0.0011045	-4.3828	-0.0018347	418.60537062211796	49.043	4.3192	49.043	47.911	52.23	0					175	108	3	0	0	0	0.6396	1	3880	3880		39.873	12.229	1	101990	+		49082	18949	32943	32956	55450	55450					0.18165308893503607
RLLKVGELRAV	11	Unmodified	_RLLKVGELRAV_					0	0	0			REV__ENSG00000131386|ENST00000339732|GALNT15	REV__ENSG00000131386|ENST00000339732|GALNT15	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	418.60659	1252.79794	-0.022256	-9.3163E-06	-4.4541	-0.0018645	-4.4763	-0.0018738	418.6046851198204	49.071	2.7151	49.065	47.966	50.681	-0.0056381	-0.044638	-0.00096948	NaN	39.873	104	63	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111610	+		49083	18949	32943	32956							0.18165308893503607
RLLLFKLLLF	10	Unmodified	_RLLLFKLLLF_					0	0	0		nc|ENSG00000171611|Q6ISU1-2|PTCRA;nc|ENSG00000171611|Q6ISU1-3|PTCRA;ENSG00000171611|ENST00000304672|PTCRA	nc|ENSG00000171611|Q6ISU1-2|PTCRA	nc|ENSG00000171611|Q6ISU1-2|PTCRA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2459716796875	3	425.95656	1274.84785	2.5614	0.0010911	3.297	0.0014044	5.8584	0.0024954	425.95787360488947	86.774	1.2841	86.829	86.017	87.302	0.055649					44	29	2	0	0	0	0.37624	1	8912	8912		8.2351	2.234	1	65316			49084	6688	32944	32957	55451	55451					0.22142043569465386
RLLLLPLLLGW	11	Unmodified	_RLLLLPLLLGW_					0	0	0		nc|ENSG00000065923|Q96T83|SLC9A7;ENSG00000065923|ENST00000616978|SLC9A7	nc|ENSG00000065923|Q96T83|SLC9A7	nc|ENSG00000065923|Q96T83|SLC9A7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2679138183594	3	436.291831	1305.85366	1.2688	0.00055357	2.891	0.0012613	4.1598	0.0018149	436.62840723220273	50.876	0.060555	50.884	50.843	50.903	0.0077438					4	2	2	0	0	0	0.18191	1	4362	4362		10.104	4.1029	1	18637			49085	1145	32945	32958	55452	55452					0.21297142081130005
RLLLPGKM	8	Unmodified	_RLLLPGKM_					0	0	0		ENSG00000101812|ENST00000675318|H2BW2;nc|ENSG00000101812|P0C1H6|H2BW2	ENSG00000101812|ENST00000675318|H2BW2	ENSG00000101812|ENST00000675318|H2BW2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.2560119628906	2	464.294048	926.573543	2.3918	0.0011105	1.7454	0.00081036	4.1372	0.0019209	464.2960012638739	25.876	0.33645	25.445	25.231	25.568	-0.4311					11	7	2	0	0	0	0.4196	1	1399	1399		19.36	11.129	1	24317			49086	1961	32946	32959	55453	55453					0.1073190253868006
RLLLPLRPLR	10	Unmodified	_RLLLPLRPLR_					0	0	0			REV__ENST00000426250.3_1_12:72666801-72667203:-|nuORF	REV__ENST00000426250.3_1_12:72666801-72667203:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2532043457031	3	416.287192	1245.83975	0.14484	6.0295E-05	1.2478	0.00051944	1.3926	0.00057974	416.6217508786327	35.377	0.78961	35.483	35.2	35.99	0.10604					31	24	2	0	0	0	0.37624	1	1900	1900		7.0187	2.9358	1	55165	+		49087	26542	32947	32960	55454	55454					0.22665909372676651
RLLLQWRLPRP	11	Unmodified	_RLLLQWRLPRP_					0	0	0			REV__ENST00000558870.1_1_15:77324662-77328157:+|nuORF	REV__ENST00000558870.1_1_15:77324662-77328157:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7276916503906	3	483.305134	1446.89357	-0.40994	-0.00019812	4.1791	0.0020198	3.7692	0.0018217	483.6410421173927	74.424	0.12125	74.983	74.881	75.002	0.55891					4	2	2	0	0	0	0.17863	1	8416	8416		19.263	7.3303	1	37818	+		49088	28738	32948	32961	55455	55455					0.18800081804374713
RLLLRPALP	9	Unmodified	_RLLLRPALP_					0	0	0		nc|ENSG00000179148|Q9BYJ1-2|ALOXE3	nc|ENSG00000179148|Q9BYJ1-2|ALOXE3	nc|ENSG00000179148|Q9BYJ1-2|ALOXE3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8267211914062	2	524.853119	1047.69168	2.892	0.0015179	0.44702	0.00023462	3.339	0.0017525	524.8543002100463	99.274	0.44436	99.22	99.079	99.524	-0.053741					16	10	2	0	0	0	0.20789	1	10749	10749		12.959	0	1	175780			49089	15124	32949	32962	55456	55456					0.1697459811882709
RLLNMVHTT	9	Unmodified	_RLLNMVHTT_					0	0	0			REV__ENST00000538998.1_1_9:128606084-128725334:+|nuORF	REV__ENST00000538998.1_1_9:128606084-128725334:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.3038330078125	2	542.800226	1083.5859	1.2343	0.00066999	-2.0428	-0.0011088	-0.80846	-0.00043883	542.7991222400209	103.47	1.0718	103.7	103.42	104.49	0.22556					41	25	2	0	0	0	0.78058	1	12638	12638		30.504	0.18592	1	542050	+		49090	21351	32950	32963	55457	55457					0.047448942110577264
RLLPEQLIKEA	11	Unmodified	_RLLPEQLIKEA_					0	0	0		ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.6051330566406	3	437.266122	1308.77654	0.94785	0.00041446	4.1396	0.0018101	5.0875	0.0022246	437.6021157281718	55.109	0.32409	55.136	54.92	55.244	0.027142					11	7	2	0	0	0	0.75779	1	4902	4902		20.315	3.7852	1	286510			49091	5329	32951	32964	55458	55458					0.13449879074119053
RLLPGNATISK	11	Unmodified	_RLLPGNATISK_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.3482055664062	2	585.35368	1168.69281	0.38091	0.00022297	-0.16063	-9.4026E-05	0.22028	0.00012894	585.3535493213133	37.303	0.79118	37.789	37.492	38.284	0.48581					49	19	4	0	0	0	0.00085052	1	3003	3003		120.27	39.818	1	1448800			49092	6838	32952	32965	55459	55459					0.11520767697084011
RLLPGNATISK	11	Unmodified	_RLLPGNATISK_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	585.35368	1168.69281	-0.47555	-0.00027837	0.68301	0.0003998	0.20745	0.00012143	585.3540020655511	37.435	0.68017	37.748	37.411	38.091	0.31312	-0.020598	0.0006869	NaN	120.27	46	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1260000			49093	6838	32952	32965							0.11520767697084011
RLLPQRGKT	9	Unmodified	_RLLPQRGKT_					0	0	0		ENST00000528897.1_1_8:11302137-11302787:-|nuORF	ENST00000528897.1_1_8:11302137-11302787:-|nuORF	ENST00000528897.1_1_8:11302137-11302787:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.8345336914062	2	534.835457	1067.65636	-0.11497	-6.1492E-05	0.34196	0.00018289	0.22698	0.0001214	534.8353406353116	19.111	0.386	18.481	18.28	18.666	-0.6296					20	8	3	0	0	0	0.7932	1	477	477		19.997	0.89325	1	204230			49094	13315	32953	32966	55460	55460					0.12523935591025293
RLLQKVLAY	9	Unmodified	_RLLQKVLAY_					0	0	0		ENSG00000179134|ENST00000610417|SAMD4B	ENSG00000179134|ENST00000610417|SAMD4B	ENSG00000179134|ENST00000610417|SAMD4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.3490600585938	2	552.350409	1102.68626	0.33416	0.00018458	-0.48241	-0.00026646	-0.14825	-8.1884E-05	552.3498919162487	49.087	0.5274	49.991	49.765	50.292	0.90424					25	12	3	0	0	0	0.47272	1	4787	4787		53.351	10.877	1	532390			49095	7248	32954	32967	55461	55461					0.13902874536347554
RLLQKVLAY	9	Unmodified	_RLLQKVLAY_					0	0	0		ENSG00000179134|ENST00000610417|SAMD4B	ENSG00000179134|ENST00000610417|SAMD4B	ENSG00000179134|ENST00000610417|SAMD4B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	552.350409	1102.68626	-0.75087	-0.00041474	0.21136	0.00011674	-0.53952	-0.000298	552.3504388516683	49.284	0.4937	49.744	49.459	49.952	0.45983	-0.12356	0.00035638	NaN	53.351	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	578120			49096	7248	32954	32967							0.13902874536347554
RLLQNELLLK	10	Unmodified	_RLLQNELLLK_					0	0	0			REV__ENSG00000100219|ENST00000344347|XBP1	REV__ENSG00000100219|ENST00000344347|XBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9326477050781	3	413.930962	1238.77106	1.9789	0.00081913	2.3996	0.00099326	4.3785	0.0018124	413.9318701140447	44.846	2.3922	44.842	44.201	46.593	-0.0041618					170	56	4	0	0	0	0.85834	1	3621	3621		22.58	3.317	1	713740	+		49097	17154	32955	32968	55462	55462					0.161222002823024
RLLRISQLIQ	10	Unmodified	_RLLRISQLIQ_					0	0	0		ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295	ENSG00000166004|ENST00000325212|CEP295	ENSG00000166004|ENST00000325212|CEP295	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.93243408203125	3	413.934706	1238.78229	-1.1382	-0.00047114	-3.9325	-0.0016278	-5.0707	-0.002099	413.9330056480743	43.336	2.2043	43.3	41.98	44.184	-0.03582					131	52	3	0	0	0	0.86106	1	3466	3466		33.922	7.2287	1	471060			49098	6147	32956	32969	55463	55463					0.17245022376482666
RLLRSVPTPL	10	Unmodified	_RLLRSVPTPL_					0	0	0		nc|ENSG00000148426|Q86WR7-2|PROSER2;ENSG00000148426|ENST00000277570|PROSER2	nc|ENSG00000148426|Q86WR7-2|PROSER2	nc|ENSG00000148426|Q86WR7-2|PROSER2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3670654296875	2	576.36659	1150.71863	0.53296	0.00030718	4.1039	0.0023653	4.6368	0.0026725	576.3687776976809	46.453	1.6617	46.469	45.398	47.06	0.015514					107	45	3	0	0	0	0.8486	1	3422	3422		18.262	0.89712	1	233880			49099	4962	32957	32970	55464	55464					0.14929661939368088
RLLRTEPAVGP	11	Unmodified	_RLLRTEPAVGP_					0	0	0		ENST00000379026.6_1_19:36133589-36134644:+|nuORF	ENST00000379026.6_1_19:36133589-36134644:+|nuORF	ENST00000379026.6_1_19:36133589-36134644:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.858154296875	2	604.859129	1207.70371	0.012057	7.2928E-06	-0.97821	-0.00059168	-0.96615	-0.00058438	604.8584425211963	80.105	0.71658	80.632	80.233	80.949	0.52676					43	16	3	0	0	0	0.6593	1	9221	9221		42.864	22.867	1	1113700			49100	10881	32958	32971	55465	55465					0.10816170071348097
RLLRVPDGLL	10	Unmodified	_RLLRVPDGLL_					0	0	0		ENSG00000205502|ENST00000380392|C2CD4B;ENSG00000198535|ENST00000355522|C2CD4A	ENSG00000205502|ENST00000380392|C2CD4B	ENSG00000205502|ENST00000380392|C2CD4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3698120117188	2	576.36659	1150.71863	0.53296	0.00030718	4.1039	0.0023653	4.6368	0.0026725	576.3687776976809	46.453	1.6617	46.469	45.398	47.06	0.015514					107	45	3	0	0	0	0.86763	1	3411	3411		26.693	5.746	1	233880			49101	8282	32959	32972	55466	55466					0.14929661939368088
RLLSCGGN	8	Carbamidomethyl (C)	_RLLSC(Carbamidomethyl (C))GGN_	RLLSC(1)GGN		RLLSC(49)GGN		0	1	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.7196350097656	2	438.721444	875.428335	-0.62222	-0.00027298	-2.5476	-0.0011177	-3.1698	-0.0013907	438.7198970188487	54.495	0.57487	54.469	54.103	54.678	-0.025955					20	17	2	0	0	0	0.9283	1	4918	4918		49.442	7.0454	1	75440			49102	2636	32960	32973	55467	55467	31				-0.014361853283048731
RLLSCGGN	8	Carbamidomethyl (C)	_RLLSC(Carbamidomethyl (C))GGN_					0	1	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	438.721444	875.428335	0.94232	0.00041342	-4.7927	-0.0021027	-3.8504	-0.0016892	438.7190905945531	54.44	0.47618	54.467	54.246	54.722	0.027138	-0.00091444	-0.00062566	NaN	49.442	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72623			49103	2636	32960	32973			31				-0.014361853283048731
RLLSEIEKL	9	Unmodified	_RLLSEIEKL_					0	0	0		ENST00000503808.5_1_4:57204874-57250274:-|nuORF;nc|ENSG00000157426|Q4L235-3|AASDH;nc|ENSG00000157426|Q4L235-4|AASDH;nc|ENSG00000157426|Q4L235-2|AASDH;ENSG00000157426|ENST00000205214|AASDH	ENST00000503808.5_1_4:57204874-57250274:-|nuORF	ENST00000503808.5_1_4:57204874-57250274:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.8381958007812	2	550.837331	1099.66011	0.15138	8.3386E-05	0.36583	0.00020151	0.51721	0.0002849	550.8375159080202	24.2	0.63874	24.255	23.869	24.508	0.055487					29	14	3	0	0	0	0.6204	1	881	881		45.972	0	1	51828			49104	5429	32961	32974	55468	55468					0.11426560574250288
RLLSGLEP	8	Unmodified	_RLLSGLEP_					0	0	0		ENST00000519956.1_3_8:77900546-77913121:-|nuORF	ENST00000519956.1_3_8:77900546-77913121:-|nuORF	ENST00000519956.1_3_8:77900546-77913121:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7677307128906	2	442.763635	883.512717	2.7372	0.0012119	2.2586	0.001	4.9958	0.002212	442.76455138148395	107.34	0.40659	107.31	107.06	107.46	-0.034134					13	9	2	0	0	0	0.4196	1	11884	11884		29.15	4.9468	1	214120			49105	13151	32962	32975	55469	55469					0.06630088760095987
RLLSSIVEELL	11	Unmodified	_RLLSSIVEELL_					0	0	0		ENST00000472077.1_1_2:27604468-27607956:-|nuORF;ENSG00000115241|ENST00000344034|PPM1G	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	636.371826171875	2	636.382103	1270.74965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.927	1	67.987	67.487	68.487	0.059288								0	0	0	0.56276	1	6074	6074		41.427	4.9799	1				49106	2824	32963	32976	55470	55470					0.1251077046294995
RLLTHSRLRRK	11	Unmodified	_RLLTHSRLRRK_					0	0	0			REV__ENSG00000156486|ENST00000287042|KCNS2	REV__ENSG00000156486|ENST00000287042|KCNS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.30926513671875	3	479.307537	1434.90078	-0.6355	-0.0003046	3.5886	0.00172	2.9531	0.0014154	479.30917580991905	52.514	1.6934	52.49	51.325	53.018	-0.023849					51	40	2	0	0	0	0.7896	1	4578	4578		13.508	2.0533	1	106560	+		49107	20491	32964	32977	55471	55471					0.20072814404807104
RLLTPHIY	8	Unmodified	_RLLTPHIY_					0	0	0		ENSG00000124201|ENST00000396105|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	ENSG00000124201|ENST00000396105|ZNFX1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8009948730469	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.663	1	45.632	45.132	46.132	-0.031067								0	0	0	0.29568	1	3709	3709		35.201	4.6971	1				49108	3316	32965	32978	55472	55472					0.08122056922422871
RLLTSLTLH	9	Unmodified	_RLLTSLTLH_					0	0	0			REV__ENST00000513199.5_1_4:99943548-99960531:+|nuORF	REV__ENST00000513199.5_1_4:99943548-99960531:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8082885742188	2	527.324391	1052.63423	2.4505	0.0012922	2.9744	0.0015685	5.4249	0.0028607	527.3252231863387	100.52	0.36095	100.86	100.78	101.14	0.34591					12	8	2	0	0	0	0.20012	1	12246	12246		94.006	27.577	1	291920	+		49109	27990	32966	32979	55473	55473					0.11001711122594315
RLLVPNRKL	9	Unmodified	_RLLVPNRKL_					0	0	0			REV__ENST00000456324.5_1_19:36726911-36727052:+|nuORF	REV__ENST00000456324.5_1_19:36726911-36727052:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.8693237304688	2	554.8693	1107.72405	-0.0075547	-4.1919E-06	0.17005	9.4357E-05	0.1625	9.0166E-05	554.8692814582408	20.007	0.64329	19.378	19.075	19.718	-0.62961					31	13	3	0	0	0	0.28875	1	591	591		65.803	1.5959	1	548660	+		49110	26955	32967	32980	55474	55474					0.17449385521831573
RLLWSLSSCSS	11	Unmodified	_RLLWSLSSCSS_					0	0	0			REV__nc|ENSG00000164118|Q9C0F1-2|CEP44	REV__nc|ENSG00000164118|Q9C0F1-2|CEP44	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.54620361328125	3	413.544779	1237.61251	0.45921	0.0001899	1.025	0.0004239	1.4842	0.0006138	413.545095398812	51.724	0.86133	52.392	51.979	52.84	0.6673					64	20	4	0	0	0	0.69687	1	5193	5193		32.034	0.39986	1	2734300	+		49111	29988	32968	32981	55475	55475					0.0032053831173470826
RLLYSRNQQVS	11	Unmodified	_RLLYSRNQQVS_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.25421142578125	3	455.252875	1362.7368	0.30184	0.00013741	-0.39223	-0.00017856	-0.090394	-4.1152E-05	455.2529082601906	29.093	0.52753	29.124	28.895	29.422	0.030947					41	19	3	0	0	0	0.76087	1	1421	1421		19.627	1.0959	1	38357	+		49112	21648	32969	32982	55476	55476					0.06993752123412378
RLMCGTMSE	9	Unmodified	_RLMCGTMSE_					0	0	0			REV__ENST00000380099.3_1_13:33635833-33635875:+|nuORF	REV__ENST00000380099.3_1_13:33635833-33635875:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	514.2199096679688	2	514.222105	1026.42966	-0.41696	-0.00021441	-3.6338	-0.0018686	-4.0508	-0.002083	514.220108431148	29.981	0.69284	30.047	29.668	30.361	0.066727					67	31	3	0	0	0	0.67345	1	1300	1300		42.396	1.8235	1	329530	+		49113	25937	32970	32983	55477	55477					-0.0825005534607044
RLMKRKQFKS	10	Unmodified	_RLMKRKQFKS_					0	0	0			REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	REV__nc|ENSG00000138182|Q96Q89-3|KIF20B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.6019592285156	3	441.267691	1320.78124	-1.49	-0.00065751	1.6673	0.00073574	0.17729	7.823E-05	441.26834688248266	54.071	1.5602	54.127	53.341	54.901	0.055614					103	52	3	0	0	0	0.85086	1	4470	4470		19.263	1.4295	1	145180	+		49114	19448	32971	32984	55478	55478					0.1336848473590635
RLMSRSQMH	9	Unmodified	_RLMSRSQMH_					0	0	0			REV__ENSG00000137831|ENST00000322954|UACA	REV__ENSG00000137831|ENST00000322954|UACA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.285888671875	2	573.28696	1144.55937	0.38627	0.00022144	-0.93536	-0.00053623	-0.54909	-0.00031479	573.2863016098212	20.64	0.98573	20.181	19.732	20.718	-0.4591					47	22	4	0	0	0	0.51307	1	664	664		51.335	3.3759	1	277750	+		49115	19415	32972	32985	55479	55479					-0.007131179519092257
RLNAGLGPGL	10	Unmodified	_RLNAGLGPGL_					0	0	0		ENST00000521774.1_1_7:120655823-120690468:+|nuORF;ENST00000495036.5_1_7:120629669-120690919:+|nuORF;nc|ENSG00000106034|A4D0V7-2|CPED1;ENSG00000106034|ENST00000310396|CPED1	ENST00000521774.1_1_7:120655823-120690468:+|nuORF	ENST00000521774.1_1_7:120655823-120690468:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.2878723144531	2	484.287808	966.561064	-0.75446	-0.00036538	2.6377	0.0012774	1.8832	0.00091201	484.2891912957526	94.428	0.99274	94.474	94.135	95.128	0.046173					42	23	2	0	0	0	0.86452	1	9974	9974		30.504	7.4612	1	329720			49116	2276	32973	32986	55480	55480					0.07644582400007494
RLNDLLPG	8	Unmodified	_RLNDLLPG_					0	0	0			REV__ENSG00000215045|ENST00000457091|GRID2IP	REV__ENSG00000215045|ENST00000457091|GRID2IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.26043701171875	2	449.261259	896.507966	-1.6904	-0.00075944	0.29835	0.00013403	-1.3921	-0.0006254	449.2612435598619	72.23	1.3235	72.615	72.251	73.575	0.38582					73	31	3	0	0	0	0.90983	1	8095	8095		42.396	1.618	1	1206100	+		49117	23675	32974	32987	55481	55481					0.05557204617332445
RLNKSWEKR	9	Unmodified	_RLNKSWEKR_					0	0	0		ENSG00000179133|ENST00000636213|C10orf67;nc|nan|Q8IYJ2|C10orf67	ENSG00000179133|ENST00000636213|C10orf67	ENSG00000179133|ENST00000636213|C10orf67	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.23388671875	3	406.235156	1215.68364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.437	1	26.097	25.597	26.597	-0.34035								0	0	0	0.32255	1	1460	1460		44.377	4.319	1				49118	7247	32975	32988	55482	55482					0.08442419131392853
RLNPTLASCQY	11	Unmodified	_RLNPTLASCQY_					0	0	0		ENSG00000182950|ENST00000332145|ODF3L1	ENSG00000182950|ENST00000332145|ODF3L1	ENSG00000182950|ENST00000332145|ODF3L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5498046875	3	422.548412	1264.62341	0.5351	0.00022611	2.7977	0.0011822	3.3328	0.0014083	422.54954180977603	22.691	0.5155	22.08	21.823	22.339	-0.6107					27	11	3	0	0	0	0.73647	1	940	940		25.068	2.4881	1	286660			49119	7486	32976	32989	55483	55483					0.0016794068601484469
RLNQLLLPLLQ	11	Unmodified	_RLNQLLLPLLQ_					0	0	0		ENSG00000089053|ENST00000261819|ANAPC5;ENST00000544442.5_1_12:121784793-121790143:-|nuORF;ENST00000545801.1_1_12:121785603-121790107:-|nuORF;ENST00000536416.5_1_12:121783870-121790143:-|nuORF	ENSG00000089053|ENST00000261819|ANAPC5	ENSG00000089053|ENST00000261819|ANAPC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.28179931640625	3	440.950245	1319.82891	0.6076	0.00026792	3.6476	0.0016084	4.2552	0.0018763	440.9516374087023	69.073	0.75814	69.106	68.673	69.431	0.033005					39	32	2	0	0	0	0.76579	1	6588	6588		18.531	2.0012	1	68286			49120	1604	32977	32990	55484	55484					0.18178462207765733
RLNRDPGL	8	Unmodified	_RLNRDPGL_					0	0	0		ENSG00000132518|ENST00000254854|GUCY2D	ENSG00000132518|ENST00000254854|GUCY2D	ENSG00000132518|ENST00000254854|GUCY2D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7690734863281	2	470.769783	939.525013	-0.23699	-0.00011157	-1.3396	-0.00063064	-1.5766	-0.00074221	470.7690852138792	80.179	2.0778	80.595	78.892	80.97	0.41621					101	48	4	0	0	0	0.89043	1	9114	9114		35.618	1.4457	1	1333300			49121	3804	32978	32991	55485	55485					0.052831252231385406
RLNRLIHDSH	10	Unmodified	_RLNRLIHDSH_					0	0	0			REV__ENST00000513117.1_1_5:6633573-6668378:+|nuORF	REV__ENST00000513117.1_1_5:6633573-6668378:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.8517456054688	2	630.849627	1259.6847	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.593	1	60.581	60.081	61.081	-0.012203								0	0	0	0.45132	1	5612	5612		30.318	1.1477	1		+		49122	27988	32979	32992	55486	55486					0.06524633500316668
RLNVNQNFRP	10	Unmodified	_RLNVNQNFRP_					0	0	0			REV__nc|ENSG00000184381|O60733-2|PLA2G6	REV__nc|ENSG00000184381|O60733-2|PLA2G6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.2384948730469	3	419.898544	1256.6738	-0.2186	-9.179E-05	-0.41427	-0.00017395	-0.63287	-0.00026574	419.8985626522357	28.279	0.91564	28.182	27.796	28.711	-0.096947					45	21	3	0	0	0	0.37624	1	1680	1680		26.063	0	1	105270	+		49123	22671	32980	32993	55487	55487					0.05573231126027167
RLNYVTEKLK	10	Unmodified	_RLNYVTEKLK_					0	0	0			REV__ENST00000479415.1_1_3:167759128-167762642:-|nuORF	REV__ENST00000479415.1_1_3:167759128-167762642:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	632.3737182617188	2	632.374612	1262.73467	-0.11854	-7.4965E-05	-0.21378	-0.00013519	-0.33233	-0.00021016	632.3746140279287	49.296	0.53338	49.756	49.459	49.992	0.45983					32	12	4	0	0	0	0.47091	1	4794	4794		58.23	1.0812	1	1288300	+		49124	21961	32981	32994	55488	55488					0.11381323385603537
RLPAFGGV	8	Unmodified	_RLPAFGGV_					0	0	0		ENSG00000165684|ENST00000684778|SNAPC4	ENSG00000165684|ENST00000684778|SNAPC4	ENSG00000165684|ENST00000684778|SNAPC4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.73931884765625	2	408.739963	815.465373	-1.9297	-0.00078873	1.2966	0.00052999	-0.63302	-0.00025874	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.86791	1	2182	2182		28.254	5.2176	1	521170			49125	6110	32982	32995	55489	55489					0.050258542797678274
RLPAFGGVIP	10	Unmodified	_RLPAFGGVIP_					0	0	0		ENSG00000165684|ENST00000684778|SNAPC4	ENSG00000165684|ENST00000684778|SNAPC4	ENSG00000165684|ENST00000684778|SNAPC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.808349609375	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.85939	1	4219	4219		23.042	1.0826	1	926440			49126	6110	32983	32996	55490	55490					0.09042343439477918
RLPAFPKPS	9	Unmodified	_RLPAFPKPS_					0	0	0		chr19:11345415-11345664|23|29.61|0.0|21.5|-|1|TMEM205,None|2;chr19:11345415-11345559|55|83.95|0.0|23.0|-|1|TMEM205,None|2;chr19:11345415-11368174|21|20.52|0.0|20.97|-|1|TE_info:AluJr,AluJr_dup77039,Alu,SINE,donor,+,11368174,11368316|TMEM205,None|1	chr19:11345415-11345664|23|29.61|0.0|21.5|-|1|TMEM205,None|2	chr19:11345415-11345664|23|29.61|0.0|21.5|-|1|TMEM205,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8002014160156	2	506.800552	1011.58655	-0.49674	-0.00025175	1.6185	0.00082027	1.1218	0.00056852	506.8013355229327	46.548	1.4801	46.564	46.121	47.601	0.015511					75	41	2	0	0	0	0.76764	1	3418	3418		34.173	9.6685	1	188180			49127	263	32984	32997	55491	55491					0.08122056922422871
RLPAVVQNAHS	11	Unmodified	_RLPAVVQNAHS_					0	0	0		ENSG00000157353|ENST00000288078|FCSK;nc|ENSG00000157353|Q8N0W3-2|FCSK;ENST00000485034.1_1_16:70512152-70512615:+|nuORF;ENST00000464499.5_1_16:70508533-70512710:+|nuORF	ENSG00000157353|ENST00000288078|FCSK	ENSG00000157353|ENST00000288078|FCSK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.3328857421875	2	596.333279	1190.652	1.5761	0.00093988	-2.1147	-0.0012611	-0.53864	-0.00032121	596.3318720869813	95.913	2.9437	96.333	95.271	98.215	0.4205					211	71	4	0	0	0	0.65746	1	11437	11437		37.812	3.639	1	1079900			49128	5423	32985	32998	55492	55492					0.06430426377460208
RLPGKKERVQV	11	Unmodified	_RLPGKKERVQV_					0	0	0			REV__ENSG00000203685|ENST00000366788|STUM	REV__ENSG00000203685|ENST00000366788|STUM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.260498046875	3	437.273611	1308.799	-2.1405	-0.000936	1.7128	0.00074896	-0.42774	-0.00018704	437.2741569154506	40.517	0.24437	40.909	40.723	40.968	0.39209					9	6	2	0	0	0	0.17289	1	3469	3469		27.644	15.211	1	209820	+		49129	23435	32986	32999	55493	55493					0.15695523262388633
RLPGLRLCVRA	11	Unmodified	_RLPGLRLCVRA_					0	0	0		ENST00000483521.1_1_9:131475404-131482989:+|nuORF	ENST00000483521.1_1_9:131475404-131482989:+|nuORF	ENST00000483521.1_1_9:131475404-131482989:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3818359375	2	627.384791	1252.75503	-0.21991	-0.00013797	-3.1518	-0.0019774	-3.3717	-0.0021154	627.3828796950999	119.3	0.087494	119.22	119.15	119.23	-0.07531					5	3	2	0	0	0	0.76322	1	12790	12790		19.104	0.84144	1	127020			49130	12516	32987	33000	55494	55494					0.1387621556441445
RLPGLRLCVRA	11	Unmodified	_RLPGLRLCVRA_					0	0	0		ENST00000483521.1_1_9:131475404-131482989:+|nuORF	ENST00000483521.1_1_9:131475404-131482989:+|nuORF	ENST00000483521.1_1_9:131475404-131482989:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	627.384791	1252.75503	2.3066	0.0014471	-4.8552	-0.0030461	-2.5486	-0.0015989	627.381452248943	119.44	0.23093	119.38	119.24	119.47	-0.05838	0.021898	0.0019877	NaN	19.104	12	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17094			49131	12516	32987	33000							0.1387621556441445
RLPGLRLCVRA	11	Unmodified	_RLPGLRLCVRA_					0	0	0		ENST00000483521.1_1_9:131475404-131482989:+|nuORF	ENST00000483521.1_1_9:131475404-131482989:+|nuORF	ENST00000483521.1_1_9:131475404-131482989:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	627.384791	1252.75503	6.583	0.00413	-9.5345	-0.0059818	-2.9515	-0.0018517	627.3788450485306	119.6	0.46828	119.47	119.19	119.66	-0.12704	0.11489	-0.0038837	NaN	19.104	28	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23036			49132	12516	32987	33000							0.1387621556441445
RLPGRLHPGA	10	Unmodified	_RLPGRLHPGA_					0	0	0		ENST00000374057.3_1_9:117267577-117267712:-|nuORF	ENST00000374057.3_1_9:117267577-117267712:-|nuORF	ENST00000374057.3_1_9:117267577-117267712:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.8010864257812	2	537.319974	1072.6254	0.44726	0.00024032	-1.1046	-0.0005935	-0.65731	-0.00035318	537.3189028025918	19.027	0.42709	18.55	18.311	18.738	-0.47694					20	9	4	0	0	0	0.37624	1	446	446		14.865	0	1	51980			49133	10766	32988	33001	55495	55495					0.09198782276780548
RLPGSRTTT	9	Unmodified	_RLPGSRTTT_					0	0	0		ENST00000457010.6_2_16:31470472-31470829:+|nuORF	ENST00000457010.6_2_16:31470472-31470829:+|nuORF	ENST00000457010.6_2_16:31470472-31470829:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7801513671875	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.76764	1	8424	8424		34.173	3.6689	1	569520			49134	11975	32989	33002	55496	55496					0.051870905319901794
RLPGWVVGL	9	Unmodified	_RLPGWVVGL_					0	0	0			REV__ENST00000342115.8_1_1:110162645-110168822:+|nuORF	REV__ENST00000342115.8_1_1:110162645-110168822:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.8001708984375	2	498.803094	995.591636	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.667	1	54.667	54.167	55.167	0								0	0	0	0.29103	1	4602	4602		40.573	7.057	1		+		49135	25269	32990	33003	55497	55497					0.09366360785031702
RLPHPRRRE	9	Unmodified	_RLPHPRRRE_					0	0	0		nc|ENSG00000186174|Q86UU0-3|BCL9L;nc|ENSG00000186174|Q86UU0-4|BCL9L;ENSG00000186174|ENST00000683865|BCL9L	nc|ENSG00000186174|Q86UU0-3|BCL9L	nc|ENSG00000186174|Q86UU0-3|BCL9L	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2422180175781	3	406.242645	1215.70611	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.683	1	24.697	24.197	25.197	0.013996								0	0	0	0.32547	1	855	855		21.686	1.6553	1				49136	7779	32991	33004	55498	55498					0.1068806331968517
RLPIFSSH	8	Unmodified	_RLPIFSSH_					0	0	0			REV__ENST00000320322.2_1_14:21584623-21584770:+|nuORF	REV__ENST00000320322.2_1_14:21584623-21584770:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.2041015625	2	478.769252	955.52395	-0.32527	-0.00015573	0.26563	0.00012717	-0.05964	-2.8554E-05	478.76892637063315	30.931	0.5303	31.011	30.767	31.297	0.079834					17	11	2	0	0	0	0.4196	1	2038	2038		31.955	0	1	154760	+		49137	24995	32992	33005	55499	55499					0.0444091085423679
RLPIPRPQ	8	Unmodified	_RLPIPRPQ_					0	0	0		ENST00000462494.5_1_7:5568445-5568514:-|nuORF	ENST00000462494.5_1_7:5568445-5568514:-|nuORF	ENST00000462494.5_1_7:5568445-5568514:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.7061767578125	2	488.806168	975.597784	1.1167	0.00054585	2.214	0.0010822	3.3307	0.0016281	488.80690200105244	95.443	0.65015	95.864	95.624	96.274	0.42051					29	15	3	0	0	0	0.4196	1	11438	11438		7.1934	0	1	186070			49138	12042	32993	33006	55500	55500					0.10900879016560339
RLPKLEFAQ	9	Unmodified	_RLPKLEFAQ_					0	0	0			REV__nc|ENSG00000133858|O60293-2|ZFC3H1	REV__nc|ENSG00000133858|O60293-2|ZFC3H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.3195190429688	2	551.324391	1100.63423	-0.22243	-0.00012263	-2.8715	-0.0015831	-3.0939	-0.0017057	551.323001796936	34.472	0.64371	34.477	34.152	34.796	0.0046539					25	14	3	0	0	0	0.76255	1	2106	2106		35.618	6.4482	1	69470	+		49139	19099	32994	33007	55501	55501					0.08793711122598324
RLPLALFES	9	Unmodified	_RLPLALFES_					0	0	0		ENST00000474550.5_1_2:101601378-101601966:+|nuORF	ENST00000474550.5_1_2:101601378-101601966:+|nuORF	ENST00000474550.5_1_2:101601378-101601966:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.303955078125	2	523.305667	1044.59678	-0.61952	-0.0003242	-3.0338	-0.0015876	-3.6533	-0.0019118	523.3039684590141	101.43	1.531	101.43	100.64	102.17	0					81	36	3	0	0	0	0.7932	1	10319	10319		24.203	2.2429	1	761010			49140	12305	32995	33008	55502	55502					0.0762661985700106
RLPLGGVHFTL	11	Unmodified	_RLPLGGVHFTL_					0	0	0			REV__ENSG00000169962|ENST00000339381|TAS1R3	REV__ENSG00000169962|ENST00000339381|TAS1R3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.911865234375	3	403.908269	1208.70298	1.0442	0.00042176	3.9474	0.0015944	4.9916	0.0020162	403.9099011929403	65.242	1.0643	65.629	64.688	65.752	0.38615					39	25	2	0	0	0	0.74405	1	7081	7081		23.378	0.79825	1	230060	+		49141	21620	32996	33009	55503	55503					0.10697375422341793
RLPLGGVHFTL	11	Unmodified	_RLPLGGVHFTL_					0	0	0			REV__ENSG00000169962|ENST00000339381|TAS1R3	REV__ENSG00000169962|ENST00000339381|TAS1R3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	403.908269	1208.70298	1.0442	0.00042176	3.9474	0.0015944	4.9916	0.0020162	403.9099011929403	65.242	1.0643	65.629	64.688	65.752	0.38615	-0.082845	-0.00073063	NaN	23.378	39	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	230060	+		49142	21620	32996	33009							0.10697375422341793
RLPLGGVHFTL	11	Unmodified	_RLPLGGVHFTL_					0	0	0			REV__ENSG00000169962|ENST00000339381|TAS1R3	REV__ENSG00000169962|ENST00000339381|TAS1R3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	403.908269	1208.70298	-0.057335	-2.3158E-05	5.0119	0.0020243	4.9545	0.0020012	403.9101833387366	65.242	1.7543	65.794	64.087	65.842	0.5526	0.082845	0.00055919	NaN	23.378	57	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	174620	+		49143	21620	32996	33009							0.10697375422341793
RLPPTLVSRLP	11	Unmodified	_RLPPTLVSRLP_					0	0	0		nc|ENSG00000261359|I3L0S3|PYCARD-AS1	nc|ENSG00000261359|I3L0S3|PYCARD-AS1	nc|ENSG00000261359|I3L0S3|PYCARD-AS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2898254394531	3	416.931073	1247.77139	-1.3674	-0.00057011	1.8369	0.00076585	0.4695	0.00019575	416.9323826642507	73.014	0.078552	73.097	73.049	73.128	0.083138					4	2	2	0	0	0	0.17729	1	6690	6690		17.833	11.512	1	20224			49144	15305	32997	33010	55504	55504					0.15741620002177115
RLPRISGT	8	Unmodified	_RLPRISGT_					0	0	0		ENST00000607097.1_1_8:94928640-94928784:-|nuORF	ENST00000607097.1_1_8:94928640-94928784:-|nuORF	ENST00000607097.1_1_8:94928640-94928784:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2744445800781	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.82658	1	9402	9402		21.96	0	1	26247000			49145	14458	32998	33011	55505	55505					0.08152313228526964
RLPRLVKRK	9	Unmodified	_RLPRLVKRK_					0	0	0			REV__nc|ENSG00000163517|Q96DB2-2|HDAC11	REV__nc|ENSG00000163517|Q96DB2-2|HDAC11	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.4026489257812	2	583.403841	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.212	1	73.766	73.266	74.266	0.55386								0	0	0	0.35896	1	8243	8243		12.207	1.9416	1		+		49146	29983	32999	33012	55506	55506					0.21732469541393584
RLPRLVKRK	9	Unmodified	_RLPRLVKRK_					0	0	0			REV__nc|ENSG00000163517|Q96DB2-2|HDAC11	REV__nc|ENSG00000163517|Q96DB2-2|HDAC11	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.4053344726562	2	583.403841	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.47	1	74.024	73.524	74.524	0.55386								0	0	0	0.31828	1	8282	8282		24.203	7.7296	1		+		49147	29983	32999	33012	55507	55507					0.21732469541393584
RLPRRYGRWVL	11	Unmodified	_RLPRRYGRWVL_					0	0	0			REV__nc|ENSG00000091262|O95255-3|ABCC6	REV__nc|ENSG00000091262|O95255-3|ABCC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.2987976074219	3	491.29675	1470.86842	-0.07893	-3.8778E-05	3.7228	0.001829	3.6439	0.0017902	491.29850370213825	107.88	0.56458	107.84	107.36	107.93	-0.042404					36	13	5	0	0	0	0.79224	1	11766	11766		12.957	3.7457	1	140110000	+		49148	29727	33000	33013	55508	55508					0.15182027001833376
RLPRRYGRWVL	11	Unmodified	_RLPRRYGRWVL_					0	0	0			REV__nc|ENSG00000091262|O95255-3|ABCC6	REV__nc|ENSG00000091262|O95255-3|ABCC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2990417480469	3	491.29675	1470.86842	2.8436	0.001397	1.9455	0.00095581	4.789	0.0023528	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.81021	1	12911	12911		9.2118	2.8909	1	3274400	+		49149	29727	33000	33013	55509	55509					0.15182027001833376
RLPRVFVRL	9	Unmodified	_RLPRVFVRL_					0	0	0		ENST00000377716.6_1_9:37903591-37903951:-|nuORF	ENST00000377716.6_1_9:37903591-37903951:-|nuORF	ENST00000377716.6_1_9:37903591-37903951:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.3736572265625	2	578.377292	1154.74003	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.106	1	47.578	47.078	48.078	0.47139								0	0	0	0.32159	1	4467	4467		23.042	2.0956	1				49150	10845	33001	33014	55510	55510					0.168850917587406
RLPRVFVRL	9	Unmodified	_RLPRVFVRL_					0	0	0		ENST00000377716.6_1_9:37903591-37903951:-|nuORF	ENST00000377716.6_1_9:37903591-37903951:-|nuORF	ENST00000377716.6_1_9:37903591-37903951:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.3744506835938	2	578.377292	1154.74003	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.516	1	47.44	46.94	47.94	0.92315								0	0	0	0.32159	1	4402	4402		23.042	2.0956	1				49151	10845	33001	33014	55511	55511					0.168850917587406
RLPRVSGG	8	Unmodified	_RLPRVSGG_					0	0	0		ENST00000481869.1_1_1:934427-935027:-|nuORF	ENST00000481869.1_1_1:934427-935027:-|nuORF	ENST00000481869.1_1_1:934427-935027:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.2540588378906	2	421.253769	840.492984	-1.773	-0.00074688	2.2835	0.00096195	0.51053	0.00021506	421.25456874716457	84.085	1.5006	84.252	83.669	85.17	0.16721					78	34	3	0	0	0	0.8347	3	8186	8186;8198;8221		34.173	5.9183	1	757090			49152	12474	33002	33015	55512;55513;55514	55512					0.06635757539993392
RLPSILHF	8	Unmodified	_RLPSILHF_					0	0	0		ENST00000460500.1_1_1:85123956-85128195:-|nuORF	ENST00000460500.1_1_1:85123956-85128195:-|nuORF	ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79547119140625	2	491.795269	981.575986	0.16895	8.3091E-05	0.70742	0.00034791	0.87638	0.000431	491.795491652363	46.653	1.8507	46.639	45.976	47.827	-0.013821					152	52	4	0	0	0	0.88915	1	3737	3737		35.201	9.7505	1	2674700			49153	12007	33003	33016	55515	55515					0.08446074267988024
RLPSILHF	8	Unmodified	_RLPSILHF_					0	0	0		ENST00000460500.1_1_1:85123956-85128195:-|nuORF	ENST00000460500.1_1_1:85123956-85128195:-|nuORF	ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7956237792969	2	491.795269	981.575986	-1.7512	-0.00086123	2.5855	0.0012715	0.83426	0.00041029	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.86791	1	3790	3790		28.254	0	1	2627300			49154	12007	33003	33016	55516	55516					0.08446074267988024
RLPSILHF	8	Unmodified	_RLPSILHF_					0	0	0		ENST00000460500.1_1_1:85123956-85128195:-|nuORF	ENST00000460500.1_1_1:85123956-85128195:-|nuORF	ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7949523925781	2	491.795269	981.575986	-1.0095	-0.00049646	1.2929	0.00063585	0.28344	0.00013939	491.79577391563464	44.834	1.3425	45.297	44.375	45.717	0.46313					102	32	4	0	0	0	0.81548	1	4063	4063		20.482	0	1	7709100			49155	12007	33003	33016	55517	55517					0.08446074267988024
RLPSILHF	8	Unmodified	_RLPSILHF_					0	0	0		ENST00000460500.1_1_1:85123956-85128195:-|nuORF	ENST00000460500.1_1_1:85123956-85128195:-|nuORF	ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79571533203125	2	491.795269	981.575986	-1.0684	-0.00052544	1.9332	0.00095072	0.86475	0.00042528	491.7960749594644	45.401	0.52972	45.865	45.676	46.205	0.46313					42	12	4	0	0	0	0.87922	1	4208	4208		31.955	2.8053	1	5204000			49156	12007	33003	33016	55518	55518					0.08446074267988024
RLPSILHF	8	Unmodified	_RLPSILHF_					0	0	0		ENST00000460500.1_1_1:85123956-85128195:-|nuORF	ENST00000460500.1_1_1:85123956-85128195:-|nuORF	ENST00000460500.1_1_1:85123956-85128195:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7960205078125	2	491.795269	981.575986	-1.1725	-0.00057664	2.0381	0.0010023	0.86553	0.00042567	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.81548	1	4291	4291		20.482	1.1219	1	3001500			49157	12007	33003	33016	55519	55519					0.08446074267988024
RLPSLETP	8	Unmodified	_RLPSLETP_					0	0	0		ENST00000521436.5_1_8:22474947-22476312:+|nuORF	ENST00000521436.5_1_8:22474947-22476312:+|nuORF	ENST00000521436.5_1_8:22474947-22476312:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7608947753906	2	456.761092	911.507631	-0.58705	-0.00026814	0.78678	0.00035937	0.19973	9.1227E-05	456.7612975873337	34.494	0.70835	34.5	34.154	34.862	0.0063934					37	16	3	0	0	0	0.91472	1	2102	2102		44.117	5.3107	1	138490			49158	13170	33004	33017	55520	55520					0.04833784897471105
RLPSQPRSI	9	Unmodified	_RLPSQPRSI_					0	0	0		ENST00000478176.1_1_20:26084284-26094659:-|nuORF	ENST00000478176.1_1_20:26084284-26094659:-|nuORF	ENST00000478176.1_1_20:26084284-26094659:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3106689453125	2	527.311815	1052.60908	0.16127	8.5039E-05	-1.0775	-0.00056818	-0.91623	-0.00048314	527.3111035367203	79.218	1.2329	79.768	79.023	80.256	0.54945					64	28	3	0	0	0	0.67345	1	9100	9100		42.396	3.1433	1	880030			49159	12377	33005	33018	55521	55521					0.08487656320039605
RLPSVRIIRQ	10	Unmodified	_RLPSVRIIRQ_					0	0	0		ENST00000426421.5_1_7:116556165-116557937:+|nuORF	ENST00000426421.5_1_7:116556165-116557937:+|nuORF	ENST00000426421.5_1_7:116556165-116557937:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.26849365234375	3	413.266568	1236.77787	0.21308	8.806E-05	3.766	0.0015564	3.9791	0.0016444	413.2670936743631	41.866	2.062	41.835	40.73	42.792	-0.030991					122	53	4	0	0	0	0.85086	1	2951	2951		19.263	6.3052	1	252870			49160	11552	33006	33019	55522	55522					0.1689555795353499
RLPSYRFRYRR	11	Unmodified	_RLPSYRFRYRR_					0	0	0		ENSG00000142408|ENST00000270458|CACNG8	ENSG00000142408|ENST00000270458|CACNG8	ENSG00000142408|ENST00000270458|CACNG8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.9716796875	3	523.967292	1568.88005	-0.042618	-2.2331E-05	4.3709	0.0022902	4.3283	0.0022679	523.969611587705	60.372	0.65467	60.358	60.075	60.73	-0.013729					36	15	3	0	0	0	0.7896	1	5587	5587		13.508	3.8618	1	178880			49161	4562	33007	33020	55523	55523					0.11836224025137199
RLPTMRLKYRL	11	Unmodified	_RLPTMRLKYRL_					0	0	0			REV__ENSG00000158748|ENST00000289753|HTR6	REV__ENSG00000158748|ENST00000289753|HTR6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	482.9598083496094	3	482.962379	1445.86531	-2.01	-0.00097073	-3.0605	-0.0014781	-5.0704	-0.0024488	482.9607228885635	19.199	0.45232	19.199	18.987	19.439	0					36	14	3	0	0	0	0.81021	1	406	406		9.2118	0	1	100610	+		49162	20619	33008	33021	55524	55524					0.16021015832802732
RLPTPAVLPG	10	Unmodified	_RLPTPAVLPG_					0	0	0			REV__ENSG00000049769|ENST00000055335|PPP1R3F	REV__ENSG00000049769|ENST00000055335|PPP1R3F	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8127136230469	2	510.813659	1019.61277	2.0738	0.0010593	-3.4035	-0.0017386	-1.3297	-0.00067922	510.811728357041	106.1	0.82207	106.22	105.9	106.72	0.12742					79	35	3	0	0	0	0.85934	1	12933	12933		35.618	1.4457	1	1055000	+		49163	16373	33009	33022	55525	55525					0.10374326093904074
RLPTRCRGT	9	Unmodified	_RLPTRCRGT_					0	0	0			REV__ENST00000600077.5_1_19:19049818-19051212:-|nuORF	REV__ENST00000600077.5_1_19:19049818-19051212:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2928466796875	2	530.295642	1058.57673	-1.5163	-0.00080409	-2.7187	-0.0014417	-4.235	-0.0022458	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.69624	1	8963	8963		40.778	1.5253	1	1686700	+		49164	29308	33010	33023	55526	55526					0.04978545645394661
RLPVGGFA	8	Unmodified	_RLPVGGFA_					0	0	0		nc|ENSG00000289720|Q96J02|ITCH;ENSG00000078747|ENST00000374864|ITCH;nc|ENSG00000289720|Q96J02-3|ITCH;nc|ENSG00000198373|O00308-3|WWP2;nc|ENSG00000198373|O00308-2|WWP2;ENSG00000198373|ENST00000359154|WWP2	nc|ENSG00000289720|Q96J02|ITCH;nc|ENSG00000198373|O00308-3|WWP2	nc|ENSG00000289720|Q96J02|ITCH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7386169433594	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.86791	1	2085	2085		28.254	4.0515	1	1654100			49165	1406;8268	33011	33024	55527	55527					0.05025854279756459
RLPYRRIHP	9	Unmodified	_RLPYRRIHP_					0	0	0		ENST00000292894.1_1_19:36530505-36530886:-|nuORF	ENST00000292894.1_1_19:36530505-36530886:-|nuORF	ENST00000292894.1_1_19:36530505-36530886:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3660888671875	2	604.362173	1206.70979	3.6458	0.0022034	3.7797	0.0022843	7.4255	0.0044877	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.7932	1	12954	12954		12.207	0	1	5883900			49166	9694	33012	33025	55528	55528					0.11470733093551644
RLQAAHLRKK	10	Unmodified	_RLQAAHLRKK_					0	0	0			REV__nc|ENSG00000117650|P51955-4|NEK2	REV__nc|ENSG00000117650|P51955-4|NEK2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	610.8929443359375	2	610.888555	1219.76256	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.058	1	21.041	20.541	21.541	-0.016428								0	0	0	0.45132	1	546	546		29.15	6.1071	1		+		49167	18275	33013	33026	55529	55529					0.161466911563366
RLQAGIERAW	10	Unmodified	_RLQAGIERAW_					0	0	0			REV__ENST00000598636.1_1_19:47725061-47730093:-|nuORF	REV__ENST00000598636.1_1_19:47725061-47730093:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.55853271484375	3	400.55964	1198.65709	-0.4013	-0.00016075	-2.4522	-0.00098224	-2.8535	-0.001143	400.55857592859013	19.576	0.65935	19.502	19.226	19.886	-0.073704					41	18	3	0	0	0	0.8608	1	450	450		38.754	10.177	1	413560	+		49168	17526	33014	33027	55530	55530					0.06570730240082412
RLQAGLPP	8	Unmodified	_RLQAGLPP_					0	0	0			REV__ENST00000455574.6_1_5:148651446-148679906:+|nuORF	REV__ENST00000455574.6_1_5:148651446-148679906:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.59466552734375	2	426.25852	850.502486	-0.079214	-3.3766E-05	-2.4267	-0.0010344	-2.5059	-0.0010682	426.2574440298504	33.818	0.87449	33.821	33.509	34.384	0.0030785					31	20	2	0	0	0	0.4196	1	1956	1956		31.955	7.7521	1	45961	+		49169	26943	33015	33028	55531	55531					0.07125525825506429
RLQAGLPP	8	Unmodified	_RLQAGLPP_					0	0	0			REV__ENST00000455574.6_1_5:148651446-148679906:+|nuORF	REV__ENST00000455574.6_1_5:148651446-148679906:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	426.25852	850.502486	-1.9762	-0.00084236	-1.2442	-0.00053033	-3.2203	-0.0013727	426.25812059003607	33.496	1.0533	33.496	33.156	34.209	0	-0.16254	0.00056557	NaN	31.955	41	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64406	+		49170	26943	33015	33028							0.07125525825506429
RLQAVQAAILL	11	Unmodified	_RLQAVQAAILL_					0	0	0		nc|ENSG00000133121|Q9Y3M8-3|STARD13;nc|ENSG00000133121|Q9Y3M8-4|STARD13;nc|ENSG00000133121|Q9Y3M8-2|STARD13;ENSG00000133121|ENST00000336934|STARD13	nc|ENSG00000133121|Q9Y3M8-3|STARD13	nc|ENSG00000133121|Q9Y3M8-3|STARD13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.3826904296875	2	598.379697	1194.74484	-0.74115	-0.00044349	3.5243	0.0021089	2.7832	0.0016654	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.72918	1	3113	3113		26.693	3.6504	1	772980			49171	3860	33016	33029	55532	55532					0.15525931110823876
RLQCLLLH	8	Carbamidomethyl (C)	_RLQC(Carbamidomethyl (C))LLLH_	RLQC(1)LLLH		RLQC(47)LLLH		0	1	0			REV__ENSG00000068654|ENST00000263857|POLR1A	REV__ENSG00000068654|ENST00000263857|POLR1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3067626953125	2	526.805311	1051.59607	-0.60466	-0.00031854	1.8512	0.0009752	1.2465	0.00065666	526.8081877026477	101.2	1.1278	101.2	100.73	101.86	0					41	26	2	0	0	0	0.92176	1	10259	10259		46.766	6.1938	1	206580	+		49172	16562	33017	33030	55533	55533	221				0.07233501936298126
RLQICCQSH	9	Unmodified	_RLQICCQSH_					0	0	0			REV__ENSG00000204583|ENST00000376608|LRCOL1	REV__ENSG00000204583|ENST00000376608|LRCOL1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.263916015625	2	544.26041	1086.50627	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.185	1	29.216	28.716	29.716	0.030945								0	0	0	0.31117	1	1426	1426		26.693	1.1189	1		+		49173	23506	33018	33031	55534	55534					-0.03352495734588956
RLQKSQLPA	9	Unmodified	_RLQKSQLPA_					0	0	0			REV__L1M2_dup9102|chr21:15781465-15783675:+|2.176233979814302|0.1805436335784144|3.59|63.0|4|1|sense	REV__L1M2_dup9102|chr21:15781465-15783675:+|2.176233979814302|0.1805436335784144|3.59|63.0|4|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.818603515625	2	520.81419	1039.61383	0.069218	3.605E-05	-1.5728	-0.00081914	-1.5036	-0.00078309	521.3154124488309	84.192	0.97058	84.628	84.214	85.185	0.43538					37	23	2	0	0	0	0.20789	1	9802	9802		44.117	0	1	104730	+		49174	29454	33019	33032	55535	55535					0.09560540462803147
RLQLAQQPALA	11	Unmodified	_RLQLAQQPALA_					0	0	0		ENST00000253008.2_1_9:133556683-133557598:+|nuORF	ENST00000253008.2_1_9:133556683-133557598:+|nuORF	ENST00000253008.2_1_9:133556683-133557598:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5748291015625	3	403.575178	1207.70371	-1.8285	-0.00073793	1.0097	0.0004075	-0.81877	-0.00033043	403.5754909660959	80.353	1.0354	80.49	79.889	80.924	0.13702					64	31	3	0	0	0	0.67762	1	7672	7672		35.178	15.916	1	264210			49175	9314	33020	33033	55536	55536					0.10816170071370834
RLQLRAGL	8	Unmodified	_RLQLRAGL_					0	0	0			REV__ENST00000456883.6_3_12:133405053-133405404:-|nuORF	REV__ENST00000456883.6_3_12:133405053-133405404:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8003845214844	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.86791	1	3456	3456		28.254	0	1	1570500	+		49176	26961	33021	33034	55537	55537					0.11636592499496601
RLQPASPPAS	10	Unmodified	_RLQPASPPAS_					0	0	0		ENST00000571245.5_1_17:3831639-3833719:-|nuORF	ENST00000571245.5_1_17:3831639-3833719:-|nuORF	ENST00000571245.5_1_17:3831639-3833719:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2822265625	2	512.282723	1022.55089	1.2711	0.00065114	-3.95	-0.0020235	-2.6789	-0.0013724	512.2806294768477	86.671	3.241	86.597	85.234	88.475	-0.074005					135	75	2	0	0	0	0.57924	1	8912	8912		51.193	8.7966	1	387010			49177	13999	33022	33035	55538	55538					0.040519746747463614
RLQPGAFQ	8	Unmodified	_RLQPGAFQ_					0	0	0		ENSG00000102802|ENST00000380482|MEDAG	ENSG00000102802|ENST00000380482|MEDAG	ENSG00000102802|ENST00000380482|MEDAG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7515563964844	2	458.753601	915.49265	-0.018123	-8.3139E-06	-3.0476	-0.0013981	-3.0657	-0.0014064	458.7518060865104	23.767	1.7664	23.385	23.018	24.785	-0.38178					59	39	2	0	0	0	0.88944	1	1069	1069		57.811	4.4598	1	878750			49178	2020	33023	33036	55539	55539					0.03152337820131379
RLQPLGLVSD	10	Unmodified	_RLQPLGLVSD_					0	0	0		nc|ENSG00000159753|Q6F5E8-2|CARMIL2;ENSG00000159753|ENST00000334583|CARMIL2;ENST00000602321.5_1_16:67683966-67684089:+|nuORF;ENST00000602633.1_1_16:67683966-67685573:+|nuORF	nc|ENSG00000159753|Q6F5E8-2|CARMIL2	nc|ENSG00000159753|Q6F5E8-2|CARMIL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3191528320312	2	549.319306	1096.62406	0.23279	0.00012788	-3.323	-0.0018254	-3.0902	-0.0016975	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.86272	1	10504	10504		24.519	4.5224	1	3004300			49179	5546	33024	33037	55540	55540					0.0796110339738334
RLQPWLHL	8	Unmodified	_RLQPWLHL_					0	0	0			REV__nc|ENSG00000143554|Q5K4L6-3|SLC27A3	REV__nc|ENSG00000143554|Q5K4L6-3|SLC27A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8179321289062	2	531.813993	1061.61343	1.0705	0.00056928	4.463	0.0023735	5.5334	0.0029427	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.88915	1	10275	10275		35.201	3.2459	1	4490200	+		49180	19822	33025	33038	55541	55541					0.08509165533587293
RLQQFVTP	8	Unmodified	_RLQQFVTP_					0	0	0			REV__ENST00000470597.5_1_5:64558740-64769500:-|nuORF	REV__ENST00000470597.5_1_5:64558740-64769500:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7798156738281	2	494.782359	987.550165	-0.60063	-0.00029718	-3.4065	-0.0016855	-4.0071	-0.0019826	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.87479	1	8400	8400		30.504	5.0535	1	707910	+		49181	27213	33026	33039	55542	55542					0.05589180025708629
RLQRARPRPGA	11	Unmodified	_RLQRARPRPGA_					0	0	0			REV__ENST00000531837.1_1_11:105948124-105948229:-|nuORF	REV__ENST00000531837.1_1_11:105948124-105948229:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.59466552734375	3	426.593566	1276.75887	-0.045125	-1.925E-05	2.4038	0.0010254	2.3587	0.0010062	426.5944815383962	33.374	1.1492	33.377	32.989	34.138	0.0030785					68	26	4	0	0	0	0.45916	1	1956	1956		55.084	7.1244	1	379550	+		49182	28313	33027	33040	55543	55543					0.13156021382496874
RLQRARPRPGA	11	Unmodified	_RLQRARPRPGA_					0	0	0			REV__ENST00000531837.1_1_11:105948124-105948229:-|nuORF	REV__ENST00000531837.1_1_11:105948124-105948229:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.59442138671875	3	426.593566	1276.75887	-0.47921	-0.00020443	2.6083	0.0011127	2.1291	0.00090825	426.5946424263707	33.571	1.0016	33.514	33.214	34.216	-0.056385					58	22	4	0	0	0	0.64498	1	2073	2073		41.08	8.0407	1	557890	+		49183	28313	33027	33040	55544	55544					0.13156021382496874
RLQRARPRPGA	11	Unmodified	_RLQRARPRPGA_					0	0	0			REV__ENST00000531837.1_1_11:105948124-105948229:-|nuORF	REV__ENST00000531837.1_1_11:105948124-105948229:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.59423828125	3	426.593566	1276.75887	1.4588	0.00062231	0.72433	0.00030899	2.1831	0.0009313	426.5938475594282	33.45	1.3653	33.448	33.012	34.377	-0.0016327					74	30	4	0	0	0	0.64498	1	1995	1995		34.087	0	1	453100	+		49184	28313	33027	33040	55545	55545					0.13156021382496874
RLQTSREKKYW	11	Unmodified	_RLQTSREKKYW_					0	0	0			REV__nc|ENSG00000235931|A4QN01|LINC01553	REV__nc|ENSG00000235931|A4QN01|LINC01553	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.9435729980469	3	498.944042	1493.8103	-0.1769	-8.8261E-05	-1.0968	-0.00054723	-1.2737	-0.0006355	498.94349260549313	50.336	0.94911	50.783	50.348	51.297	0.44761					83	22	5	0	0	0	0.77205	2	4950	4950;4967		17.167	2.9046	1	6998100	+		49185	30225	33028	33041	55546;55547	55546					0.08314300565893973
RLQTSREKKYW	11	Unmodified	_RLQTSREKKYW_					0	0	0			REV__nc|ENSG00000235931|A4QN01|LINC01553	REV__nc|ENSG00000235931|A4QN01|LINC01553	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.94342041015625	3	498.944042	1493.8103	0.81029	0.00040429	-2.1748	-0.0010851	-1.3645	-0.00068083	498.9429898071896	50.142	0.77797	50.987	50.599	51.377	0.84501					71	18	5	0	0	0	0.72892	1	4940	4940		26.75	2.5179	1	7799100	+		49186	30225	33028	33041	55548	55548					0.08314300565893973
RLQVWRVSA	9	Unmodified	_RLQVWRVSA_					0	0	0		ENST00000564929.5_1_15:75648526-75649229:-|nuORF	ENST00000564929.5_1_15:75648526-75649229:-|nuORF	ENST00000564929.5_1_15:75648526-75649229:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.829345703125	2	557.827632	1113.64071	1.3464	0.00075106	4.2948	0.0023958	5.6412	0.0031468	557.8300995899048	100.89	1.6699	100.93	100.47	102.14	0.046356					80	39	3	0	0	0	0.78983	2	10868	10868;10892		27.882	2.3082	1	658310			49187	13897	33029	33042	55549;55550	55549					0.0884364907399231
RLRALEAAGP	10	Unmodified	_RLRALEAAGP_					0	0	0			REV__ENSG00000132478|ENST00000589666|UNK	REV__ENSG00000132478|ENST00000589666|UNK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3106079101562	2	527.311815	1052.60908	0.22805	0.00012025	-1.4606	-0.00077019	-1.2325	-0.00064993	527.3109109335428	80.785	0.86409	81.312	80.907	81.771	0.52676					54	20	3	0	0	0	0.77314	1	9312	9312		40.778	1.5253	1	2180000	+		49188	19007	33030	33043	55551	55551					0.08487656320016868
RLRALEAAGP	10	Unmodified	_RLRALEAAGP_					0	0	0			REV__ENSG00000132478|ENST00000589666|UNK	REV__ENSG00000132478|ENST00000589666|UNK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3109130859375	2	527.311815	1052.60908	0.30458	0.00016061	-1.4031	-0.00073988	-1.0985	-0.00057927	527.3109007634706	82.716	1.747	83.19	82.836	84.583	0.47384					72	41	3	0	0	0	0.77314	1	9581	9581		40.778	0	1	1438500	+		49189	19007	33030	33043	55552	55552					0.08487656320016868
RLRAPGAA	8	Unmodified	_RLRAPGAA_					0	0	0		ENST00000232564.7_1_3:179169144-179169282:-|nuORF	ENST00000232564.7_1_3:179169144-179169282:-|nuORF	ENST00000232564.7_1_3:179169144-179169282:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24884033203125	2	406.248486	810.48242	3.144	0.0012772	-2.6463	-0.0010751	0.49768	0.00020218	406.2473237922933	114.03	1.1173	114.05	113.12	114.24	0.020027					74	50	2	0	0	0	0.85787	1	13691	13691		9.4706	0	1	65995			49190	9219	33031	33044	55553	55553					0.06959774885547176
RLRCASVSY	9	Unmodified	_RLRCASVSY_					0	0	0			REV__ENST00000461395.5_1_2:220397036-220397240:+|nuORF	REV__ENST00000461395.5_1_2:220397036-220397240:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8082885742188	2	527.776751	1053.53895	2.3305	0.00123	-3.0753	-0.0016231	-0.7448	-0.00039309	527.7752347253578	100.25	0.40514	100.59	100.45	100.86	0.34591					14	9	2	0	0	0	0.20012	1	12163	12163		82.305	5.4584	1	97716	+		49191	16640	33032	33045	55554	55554					0.014320346599106415
RLRCGRRH	8	Unmodified	_RLRCGRRH_					0	0	0			REV__ENSG00000178904|ENST00000392250|DPY19L3	REV__ENSG00000178904|ENST00000392250|DPY19L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.3086547851562	2	527.301593	1052.58863	2.9406	0.0015506	3.4434	0.0018157	6.384	0.0033663	527.3038780211599	99.28	1.7966	99.226	98.69	100.49	-0.053741					98	41	3	0	0	0	0.67263	4	10702	10702;10738;10762;10781		68.485	18.46	1	1691500	+		49192	22299	33033	33046	55555;55556;55557;55558	55555					0.06444207179242767
RLRDVAPMVTR	11	Unmodified	_RLRDVAPMVTR_					0	0	0		ENST00000564546.5_1_16:30076568-30077015:+|nuORF	ENST00000564546.5_1_16:30076568-30077015:+|nuORF	ENST00000564546.5_1_16:30076568-30077015:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.58575439453125	3	438.587201	1312.73977	-1.584	-0.00069474	-1.8079	-0.00079292	-3.3919	-0.0014877	438.5863355487925	32.045	0.80102	32.103	31.818	32.619	0.058319					85	39	3	0	0	0	0.71394	1	1487	1487		29.245	4.1772	1	359140			49193	13887	33034	33047	55559	55559					0.0959130397654917
RLREGQAL	8	Unmodified	_RLREGQAL_					0	0	0		ENST00000411473.1_1_X:147279889-147280084:-|nuORF	ENST00000411473.1_1_X:147279889-147280084:-|nuORF	ENST00000411473.1_1_X:147279889-147280084:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.7793273925781	2	471.777608	941.540663	-0.3072	-0.00014493	2.9323	0.0013834	2.6251	0.0012384	471.7788353055033	81.895	1.368	82.322	81.921	83.289	0.42646					68	33	4	0	0	0	0.60357	1	9482	9482		71.296	7.9894	1	2126100			49194	11326	33035	33048	55560	55560					0.06755411740175532
RLREVIAS	8	Unmodified	_RLREVIAS_					0	0	0			REV__ENSG00000184384|ENST00000524717|MAML2	REV__ENSG00000184384|ENST00000524717|MAML2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2875671386719	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.85277	1	12817	12817		25.45	0	1	3080300	+		49195	22672	33036	33049	55561	55561					0.0874858239999412
RLRFAILY	8	Unmodified	_RLRFAILY_					0	0	0		ENSG00000218305|ENST00000650262|CDC14C	ENSG00000218305|ENST00000650262|CDC14C	ENSG00000218305|ENST00000650262|CDC14C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3216552734375	2	526.324194	1050.63383	-0.67072	-0.00035302	1.8472	0.00097224	1.1765	0.00061923	526.3250687277414	64.714	3.1276	64.752	62.47	65.598	0.037849					207	130	2	0	0	0	0.82464	1	5528	5528		21.702	0	1	198930			49196	8660	33037	33050	55562	55562					0.110543361934333
RLRGAPCPAL	10	Unmodified	_RLRGAPCPAL_					0	0	0			REV__ENST00000394833.6_1_4:103265936-103266233:-|nuORF	REV__ENST00000394833.6_1_4:103265936-103266233:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.306884765625	2	527.302936	1052.59132	2.9405	0.0015506	0.8971	0.00047304	3.8376	0.0020236	527.3038780211599	99.28	1.7966	99.226	98.69	100.49	-0.053741					98	41	3	0	0	0	0.74274	1	10714	10714		42.396	3.59	1	1691500	+		49197	26092	33038	33051	55563	55563					0.06712617793527897
RLRGIMYK	8	Unmodified	_RLRGIMYK_					0	0	0			REV__nc|ENSG00000141934|O43688-3|PLPP2	REV__nc|ENSG00000141934|O43688-3|PLPP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.809814453125	2	518.807854	1035.60115	1.4633	0.00075919	3.4883	0.0018097	4.9516	0.0025689	518.8094853315844	89.952	0.62448	90.403	90.239	90.863	0.45058					29	16	2	0	0	0	0.9295	1	10653	10653		55.504	6.0627	1	1149500	+		49198	19714	33039	33052	55564	55564					0.08477805798884219
RLRGITRTF	9	Unmodified	_RLRGITRTF_					0	0	0		chrX:153796552-153798071|16|62.5|0.33|7.58|+|1|SSR4,SSR4|2	chrX:153796552-153798071|16|62.5|0.33|7.58|+|1|SSR4,SSR4|2	chrX:153796552-153798071|16|62.5|0.33|7.58|+|1|SSR4,SSR4|2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3402099609375	2	560.340907	1118.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.41	1	104.6	104.1	105.1	0.18887								0	0	0	0.30778	1	12709	12709		27.882	3.3631	1				49199	546	33040	33053	55565	55565					0.11267337965296065
RLRGLEPPSAL	11	Unmodified	_RLRGLEPPSAL_					0	0	0			REV__ENST00000395336.7_1_11:47291747-47295429:+|nuORF	REV__ENST00000395336.7_1_11:47291747-47295429:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.57489013671875	3	403.575178	1207.70371	-1.7086	-0.00068956	0.81853	0.00033034	-0.89009	-0.00035922	403.5754460433533	81.698	1.5245	81.812	80.874	82.399	0.11426					96	35	4	0	0	0	0.49623	1	7787	7787		52.167	12.109	1	1977300	+		49200	26105	33041	33054	55566	55566					0.10816170071370834
RLRGLEPPSAL	11	Unmodified	_RLRGLEPPSAL_					0	0	0			REV__ENST00000395336.7_1_11:47291747-47295429:+|nuORF	REV__ENST00000395336.7_1_11:47291747-47295429:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57476806640625	3	403.575178	1207.70371	-0.098768	-3.986E-05	-1.4245	-0.00057487	-1.5232	-0.00061473	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.62914	1	9490	9490		41.08	1.0219	1	16485000	+		49201	26105	33041	33054	55567	55567					0.10816170071370834
RLRGSPRPL	9	Unmodified	_RLRGSPRPL_					0	0	0		ENST00000578067.5_1_17:61776931-61777213:-|nuORF	ENST00000578067.5_1_17:61776931-61777213:-|nuORF	ENST00000578067.5_1_17:61776931-61777213:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3242797851562	2	526.327799	1050.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.148	1	75.236	74.736	75.736	0.087631								0	0	0	0.30778	1	6948	6948		27.882	1.1893	1				49202	14077	33042	33055	55568	55568					0.11775068793826904
RLRHLFPD	8	Unmodified	_RLRHLFPD_					0	0	0			REV__ENSG00000157782|ENST00000316803|CABP1	REV__ENSG00000157782|ENST00000316803|CABP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.3062133789062	2	527.30125	1052.58795	2.9406	0.0015506	4.0934	0.0021585	7.034	0.003709	527.3038780211599	99.28	1.7966	99.226	98.69	100.49	-0.053741					98	41	3	0	0	0	0.91472	1	10726	10726		44.117	3.5442	1	1691500	+		49203	20564	33043	33056	55569	55569					0.06375691011180606
RLRHWFER	8	Unmodified	_RLRHWFER_					0	0	0			REV__ENST00000476826.5_1_6:160210904-160219152:+|nuORF	REV__ENST00000476826.5_1_6:160210904-160219152:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	600.3369140625	2	600.330873	1198.64719	0.56346	0.00033827	4.4138	0.0026498	4.9773	0.002988	600.333112305304	19.211	0.33591	19.285	19.118	19.454	0.073465					17	10	2	0	0	0	0.87792	1	374	374		21.96	0	1	33257	+		49204	17914	33044	33057	55570	55570					0.055815870253582034
RLRIGIHTGP	10	Unmodified	_RLRIGIHTGP_					0	0	0		ENSG00000169418|ENST00000368680|NPR1;ENST00000368677.2_1_1:153661447-153665772:+|nuORF	ENSG00000169418|ENST00000368680|NPR1	ENSG00000169418|ENST00000368680|NPR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3392944335938	2	560.340907	1118.66726	1.3844	0.00077575	-2.5897	-0.0014511	-1.2053	-0.00067535	560.3393459744692	117.94	0.74445	117.97	117.54	118.29	0.026466					39	25	2	0	0	0	0.85466	1	12946	12946		20.947	3.582	1	42658			49205	6496	33045	33058	55571	55571					0.11267337965318802
RLRIQPSSP	9	Unmodified	_RLRIQPSSP_					0	0	0		nc|ENSG00000160584|Q9Y2K2-8|SIK3;ENSG00000160584|ENST00000445177|SIK3;nc|ENSG00000160584|Q9Y2K2-7|SIK3;nc|ENSG00000160584|Q9Y2K2|SIK3	nc|ENSG00000160584|Q9Y2K2-8|SIK3	nc|ENSG00000160584|Q9Y2K2-8|SIK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3111572265625	2	527.311815	1052.60908	0.30458	0.00016061	-1.4031	-0.00073988	-1.0985	-0.00057927	527.3109007634706	82.716	1.747	83.19	82.836	84.583	0.47384					72	41	3	0	0	0	0.62081	1	9572	9572		45.952	1.8352	1	1438500			49206	5594	33046	33059	55572	55572					0.08487656320039605
RLRKLLSHQKR	11	Unmodified	_RLRKLLSHQKR_					0	0	0			REV__ENSG00000115268|ENST00000592588|RPS15	REV__ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9756164550781	3	478.975788	1433.90553	0.41435	0.00019846	-3.1102	-0.0014897	-2.6958	-0.0012912	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.79224	1	5212	5212		12.957	1.5029	1	131420	+		49207	18102	33047	33060	55573	55573					0.20593698547577333
RLRKLLSHQKR	11	Unmodified	_RLRKLLSHQKR_					0	0	0			REV__ENSG00000115268|ENST00000592588|RPS15	REV__ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9742736816406	3	478.975788	1433.90553	-0.20548	-9.8418E-05	-2.506	-0.0012003	-2.7115	-0.0012987	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.7896	1	3452	3452		13.508	0.55046	1	468190	+		49208	18102	33047	33060	55574	55574					0.20593698547577333
RLRKSEPAP	9	Unmodified	_RLRKSEPAP_					0	0	0		ENST00000491815.1_1_1:14075919-14099632:+|nuORF;ENST00000491134.5_1_1:14075919-14099594:+|nuORF	ENST00000491815.1_1_1:14075919-14099632:+|nuORF	ENST00000491815.1_1_1:14075919-14099632:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3099975585938	2	527.311815	1052.60908	0.29221	0.00015408	-1.3979	-0.00073715	-1.1057	-0.00058307	527.3109426709796	80.891	0.85687	81.312	80.891	81.748	0.4215					62	20	4	0	0	0	0.58151	1	9274	9274		47.916	3.7988	1	2260400			49209	12676	33048	33061	55575	55575					0.08487656320016868
RLRKWHGT	8	Unmodified	_RLRKWHGT_					0	0	0			REV__ENSG00000114999|ENST00000233336|TTL	REV__ENSG00000114999|ENST00000233336|TTL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3064575195312	2	527.306867	1052.59918	-0.62415	-0.00032912	-3.4671	-0.0018282	-4.0912	-0.0021573	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.87479	1	10201	10201		30.504	5.9844	1	949980	+		49210	18078	33049	33062	55576	55576					0.07498513105315396
RLRLADRRR	9	Unmodified	_RLRLADRRR_					0	0	0			REV__ENST00000270357.9_2_2:241508179-241513275:+|nuORF	REV__ENST00000270357.9_2_2:241508179-241513275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.58917236328125	3	404.590045	1210.7483	0.17885	7.236E-05	-2.2454	-0.00090845	-2.0665	-0.00083609	404.5890516543303	39.161	1.4029	39.25	38.65	40.053	0.088371					99	37	3	0	0	0	0.78912	1	2348	2348		28.081	2.9555	1	306250	+		49211	24530	33050	33063	55577	55577					0.15136038728041967
RLRLDRFTG	9	Unmodified	_RLRLDRFTG_					0	0	0			REV__ENSG00000173080|ENST00000368318|RXFP4	REV__ENSG00000173080|ENST00000368318|RXFP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3300170898438	2	567.330539	1132.64652	-1.2006	-0.00068114	-0.16538	-9.3826E-05	-1.366	-0.00077496	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.76764	1	9477	9477		34.173	2.6427	1	15673000	+		49212	21886	33051	33064	55578	55578					0.08550747585650242
RLRLDRFTG	9	Unmodified	_RLRLDRFTG_					0	0	0			REV__ENSG00000173080|ENST00000368318|RXFP4	REV__ENSG00000173080|ENST00000368318|RXFP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3297729492188	2	567.330539	1132.64652	0.79571	0.00045143	-2.2136	-0.0012558	-1.4178	-0.00080439	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.78528	1	9808	9808		29.17	1.2878	1	18145000	+		49213	21886	33051	33064	55579	55579					0.08550747585650242
RLRLELDS	8	Unmodified	_RLRLELDS_					0	0	0			REV__ENSG00000177575|ENST00000432237|CD163	REV__ENSG00000177575|ENST00000432237|CD163	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2901306152344	2	501.290548	1000.56654	-0.064942	-3.2555E-05	-0.21369	-0.00010712	-0.27863	-0.00013967	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.87922	1	8493	8493		31.955	0.42505	1	2854100	+		49214	22219	33052	33065	55580	55580					0.06628261191792717
RLRLLAAARN	10	Unmodified	_RLRLLAAARN_					0	0	0		ENSG00000168140|ENST00000304735|VASN	ENSG00000168140|ENST00000304735|VASN	ENSG00000168140|ENST00000304735|VASN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	577.3665161132812	2	577.367456	1152.72036	0.74115	0.00042792	-2.508	-0.0014481	-1.7669	-0.0010201	577.3658570064985	102.18	2.9839	102.23	101.81	104.79	0.043198					214	72	5	0	0	0	0.86718	1	11025	11025		27.882	3.6795	1	10154000			49215	6376	33053	33066	55581	55581					0.1501071574798516
RLRLLGPGAA	10	Unmodified	_RLRLLGPGAA_					0	0	0		ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.324951171875	2	512.324725	1022.6349	0.39641	0.00020309	-0.71681	-0.00036724	-0.3204	-0.00016415	512.3242771059046	21.552	0.81508	20.923	20.462	21.277	-0.62834					33	20	2	0	0	0	0.86589	1	800	800		29.15	4.9468	1	114470			49216	3698	33054	33067	55582	55582					0.12448550562328364
RLRLPLEAAL	10	Unmodified	_RLRLPLEAAL_					0	0	0		ENSG00000261150|ENST00000615648|EPPK1	ENSG00000261150|ENST00000615648|EPPK1	ENSG00000261150|ENST00000615648|EPPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3695068359375	2	576.36659	1150.71863	0.38706	0.00022309	4.0536	0.0023364	4.4407	0.0025595	576.3687857053872	46.409	2.2039	46.447	45.362	47.565	0.038181					117	60	3	0	0	0	0.86763	1	3372	3372		26.693	1.1189	1	342020			49217	8922	33055	33068	55583	55583					0.14929661939368088
RLRLRAPPTG	10	Unmodified	_RLRLRAPPTG_					0	0	0		ENST00000543341.6_1_12:124140334-124144070:+|nuORF	ENST00000543341.6_1_12:124140334-124144070:+|nuORF	ENST00000543341.6_1_12:124140334-124144070:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.853515625	2	568.854181	1135.69381	-1.3907	-0.00079112	-0.55616	-0.00031637	-1.9469	-0.0011075	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.77314	1	10748	10748		40.778	11.629	1	72465000			49218	13551	33056	33069	55584	55584					0.13139026856629243
RLRLRKERVSD	11	Unmodified	_RLRLRKERVSD_					0	0	0		nc|ENSG00000107593|Q9P0L9-4|PKD2L1;nc|ENSG00000107593|Q9P0L9-3|PKD2L1;nc|ENSG00000107593|Q9P0L9-2|PKD2L1;ENSG00000107593|ENST00000318222|PKD2L1;nc|ENSG00000107593|Q9P0L9-5|PKD2L1	nc|ENSG00000107593|Q9P0L9-4|PKD2L1	nc|ENSG00000107593|Q9P0L9-4|PKD2L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6238708496094	3	476.623303	1426.84808	2.8112	0.0013399	-1.9889	-0.00094794	0.82234	0.00039195	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.80813	1	12423	12423		9.6461	0.43434	1	2689700			49219	2353	33057	33070	55585	55585					0.1517281155136061
RLRLRRGG	8	Unmodified	_RLRLRRGG_					0	0	0		ENST00000466082.1_3_9:34660594-34661492:+|nuORF	ENST00000466082.1_3_9:34660594-34661492:+|nuORF	ENST00000466082.1_3_9:34660594-34661492:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.31793212890625	2	492.320309	982.626064	-0.75989	-0.00037411	0.66727	0.00032851	-0.092623	-4.56E-05	492.32056657313603	15.899	0.37498	15.947	15.788	16.163	0.047803					26	15	2	0	0	0	0.80706	1	112	112		19.36	1.0356	1	78070			49220	12123	33058	33071	55586	55586					0.1340562171651527
RLRLTKRK	8	Unmodified	_RLRLTKRK_					0	0	0		nc|ENSG00000125386|P78312-4|FAM193A;nc|ENSG00000125386|P78312-6|FAM193A;nc|ENSG00000125386|P78312-2|FAM193A;nc|ENSG00000125386|P78312-5|FAM193A;nc|ENSG00000125386|P78312|FAM193A;ENSG00000125386|ENST00000637812|FAM193A;ENST00000513898.5_1_4:2696860-2717089:+|nuORF	nc|ENSG00000125386|P78312-4|FAM193A	nc|ENSG00000125386|P78312-4|FAM193A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.8671875	2	535.867092	1069.71963	-0.04429	-2.3734E-05	-0.088919	-4.7649E-05	-0.13321	-7.1382E-05	535.8668991008702	17.209	0.54296	16.598	16.386	16.929	-0.6107					22	11	3	0	0	0	0.7961	1	233	233		17.365	0	1	371070			49221	3385	33059	33072	55587	55587					0.18755921098909312
RLRLTKRK	8	Unmodified	_RLRLTKRK_					0	0	0		nc|ENSG00000125386|P78312-4|FAM193A;nc|ENSG00000125386|P78312-6|FAM193A;nc|ENSG00000125386|P78312-2|FAM193A;nc|ENSG00000125386|P78312-5|FAM193A;nc|ENSG00000125386|P78312|FAM193A;ENSG00000125386|ENST00000637812|FAM193A;ENST00000513898.5_1_4:2696860-2717089:+|nuORF	nc|ENSG00000125386|P78312-4|FAM193A	nc|ENSG00000125386|P78312-4|FAM193A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	535.867092	1069.71963	0.51303	0.00027492	-0.83455	-0.00044721	-0.32152	-0.00017229	535.8665104051548	17.139	0.45142	16.657	16.493	16.944	-0.48256	0.029206	-0.00038542	NaN	17.365	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299080			49222	3385	33059	33072							0.18755921098909312
RLRLTLQGPGP	11	Unmodified	_RLRLTLQGPGP_					0	0	0			REV__ENSG00000108828|ENST00000355653|VAT1	REV__ENSG00000108828|ENST00000355653|VAT1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3674926757812	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.21	1	118.18	117.68	118.68	-0.024208								0	0	0	0.56276	1	13091	13091		19.104	16.385	1		+		49223	17734	33060	33073	55588	55588					0.12459876308253115
RLRNIESD	8	Unmodified	_RLRNIESD_					0	0	0			REV__nc|ENSG00000128487|Q5M775-5|SPECC1	REV__nc|ENSG00000128487|Q5M775-5|SPECC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2906799316406	2	501.76998	1001.52541	-0.064079	-3.2153E-05	0.077353	3.8814E-05	0.013275	6.6609E-06	501.7700953466205	88.151	3.2435	88.218	87.14	90.384	0.067719					110	75	2	0	0	0	0.4196	1	9133	9133		29.15	18.284	1	165790	+		49224	18772	33061	33074	55589	55589					0.024705001523216197
RLRNLPTINR	10	Unmodified	_RLRNLPTINR_					0	0	0		nc|ENSG00000168961|O00182-3|LGALS9;nc|ENSG00000168961|O00182-2|LGALS9;nc|ENSG00000168961|O00182-6|LGALS9;ENSG00000168961|ENST00000395473|LGALS9	nc|ENSG00000168961|O00182-3|LGALS9	nc|ENSG00000168961|O00182-3|LGALS9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.258544921875	3	418.258072	1251.75239	1.0843	0.00045354	-1.0496	-0.00043901	0.034733	1.4527E-05	418.25769485547886	33.577	1.046	33.747	33.314	34.36	0.16971					53	24	5	0	0	0	0.50904	3	2421	2421;2433;2446		55.084	6.3692	1	667310			49225	6456	33062	33075	55590;55591;55592	55590					0.1365808343111894
RLRNLPTINR	10	Unmodified	_RLRNLPTINR_					0	0	0		nc|ENSG00000168961|O00182-3|LGALS9;nc|ENSG00000168961|O00182-2|LGALS9;nc|ENSG00000168961|O00182-6|LGALS9;ENSG00000168961|ENST00000395473|LGALS9	nc|ENSG00000168961|O00182-3|LGALS9	nc|ENSG00000168961|O00182-3|LGALS9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.25830078125	3	418.258072	1251.75239	1.1005	0.00046029	-0.90238	-0.00037743	0.19813	8.2868E-05	418.25761040723347	33.526	0.83737	33.788	33.279	34.116	0.26204					45	19	3	0	0	0	0.44744	3	2445	2435;2445;2458		60.167	22.546	1	742540			49226	6456	33062	33075	55593;55594;55595	55594					0.1365808343111894
RLRNPLERP	9	Unmodified	_RLRNPLERP_					0	0	0		nc|ENSG00000260220|A0A096LP49-2|CCDC187;nc|ENSG00000260220|A0A096LP49|CCDC187;ENSG00000260220|ENST00000638797|CCDC187	nc|ENSG00000260220|A0A096LP49-2|CCDC187	nc|ENSG00000260220|A0A096LP49-2|CCDC187	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8431396484375	2	575.843813	1149.67307	0.60609	0.00034901	-2.0632	-0.0011881	-1.4571	-0.00083907	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.76255	1	8918	8918		35.618	0	1	2381900			49227	8916	33063	33076	55596	55596					0.10422436476960684
RLRPACAVLT	10	Unmodified	_RLRPACAVLT_					0	0	0		ENST00000565336.1_1_1:94313579-94313903:+|nuORF	ENST00000565336.1_1_1:94313579-94313903:+|nuORF	ENST00000565336.1_1_1:94313579-94313903:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.3275146484375	2	550.323868	1098.63318	3.188	0.0017544	2.9044	0.0015983	6.0923	0.0033527	550.325464553472	100.2	1.1012	100.15	99.651	100.75	-0.052353					65	24	3	0	0	0	0.86218	1	10883	10883		32.812	1.2826	1	374270			49228	13909	33064	33077	55597	55597					0.08781173482043414
RLRPARARR	9	Unmodified	_RLRPARARR_					0	0	0			REV__ENST00000356362.6_1_7:105148961-105162615:-|nuORF	REV__ENST00000356362.6_1_7:105148961-105162615:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	576.369873046875	2	576.370864	1150.72718	-1.1857	-0.0006834	-2.6096	-0.0015041	-3.7953	-0.0021875	576.3692069652303	43.303	1.7585	43.303	42.57	44.329	0					110	42	3	0	0	0	0.7932	1	3045	3045		24.203	0	1	302820	+		49229	25388	33065	33078	55598	55598					0.1578407341919501
RLRQELLLLLR	11	Unmodified	_RLRQELLLLLR_					0	0	0		ENSG00000255181|ENST00000542437|CCDC166	ENSG00000255181|ENST00000542437|CCDC166	ENSG00000255181|ENST00000542437|CCDC166	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	475.60748291015625	3	474.980427	1421.91945	0.68955	0.00032752	-1.5645	-0.00074311	-0.87497	-0.00041559	475.3139066598906	17.144	0.1255	17.12	17.01	17.136	-0.024035					5	4	2	0	0	0	0.18353	1	213	213		5.1424	4.1445	1	193590			49230	8882	33066	33079	55599	55599					0.2253693125603604
RLRQELVHL	9	Unmodified	_RLRQELVHL_					0	0	0			REV__ENST00000464858.5_1_1:228333604-228336395:+|nuORF	REV__ENST00000464858.5_1_1:228333604-228336395:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3536376953125	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.7932	1	12830	12830		18.324	0.95945	1	3937500	+		49231	19839	33067	33080	55600	55600					0.11863607136797327
RLRQIRRQRGR	11	Unmodified	_RLRQIRRQRGR_					0	0	0			REV__ENST00000379656.7_1_19:18112104-18119556:+|nuORF	REV__ENST00000379656.7_1_19:18112104-18119556:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.28485107421875	3	498.981936	1493.92398	-2.8498	-0.001422	0.20627	0.00010292	-2.6435	-0.0013191	498.9819030417459	41.275	0.57604	41.683	41.466	42.042	0.40769					40	15	3	0	0	0	0.18331	1	3646	3646		3.026	0	1	1115000	+		49232	25926	33068	33081	55601	55601					0.1967725324213916
RLRQKRRRRKH	11	Unmodified	_RLRQKRRRRKH_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2294921875	3	530.676847	1589.00871	0.57327	0.00030422	1.5206	0.00080695	2.0939	0.0011112	531.0129410966543	29.32	0.096176	29.332	29.268	29.364	0.011229					5	4	2	0	0	0	0.18318	1	1235	1235		6.001	4.5823	1	30777	+		49233	17657	33069	33082	55602	55602					0.2377662377875822
RLRQLAWMR	9	Unmodified	_RLRQLAWMR_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.178466796875	3	410.573115	1228.69751	-0.11479	-4.7131E-05	3.3965	0.0013945	3.2817	0.0013474	410.5742131609926	78.812	0.42361	79.376	79.163	79.587	0.56332					19	9	3	0	0	0	0.20789	1	9037	9037		33.922	5.3449	1	120560	+		49234	18791	33070	33083	55603	55603					0.09231373358852579
RLRQLAWMR	9	Unmodified	_RLRQLAWMR_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	410.573115	1228.69751	0.83473	0.00034272	2.1975	0.00090225	3.0323	0.001245	410.573999944486	78.823	0.50939	79.233	79.142	79.651	0.41059	-0.07131	-0.00042029	NaN	33.922	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96106	+		49235	18791	33070	33083							0.09231373358852579
RLRRALLGRM	10	Unmodified	_RLRRALLGRM_					0	0	0			REV__ENSG00000164919|ENST00000520468|COX6C	REV__ENSG00000164919|ENST00000520468|COX6C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3926391601562	2	621.390408	1240.76626	2.9766	0.0018496	0.7245	0.00045019	3.7011	0.0022998	621.3907359645153	104.71	2.7313	104.66	104.1	106.83	-0.04039					247	64	5	0	0	0	0.85958	1	11601	11601		15.642	0	1	12926000	+		49236	21129	33071	33084	55604	55604					0.15551037658565292
RLRRPGPPGG	10	Unmodified	_RLRRPGPPGG_					0	0	0			REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8169555664062	2	531.817599	1061.62064	-0.78788	-0.00041901	-0.44237	-0.00023526	-1.2302	-0.00065427	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.86589	1	8264	8264		29.15	1.2673	1	859730	+		49237	25423	33072	33085	55605	55605					0.09229898134049108
RLRRPGPPGG	10	Unmodified	_RLRRPGPPGG_					0	0	0			REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8172607421875	2	531.817599	1061.62064	-0.033207	-1.766E-05	-0.82835	-0.00044053	-0.86155	-0.00045819	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.84112	1	8807	8807		37.159	5.6293	1	1254600	+		49238	25423	33072	33085	55606	55606					0.09229898134049108
RLRRPGPPGG	10	Unmodified	_RLRRPGPPGG_					0	0	0			REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8168334960938	2	531.817599	1061.62064	1.595	0.00084823	-2.9849	-0.0015874	-1.3899	-0.00073919	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.86589	1	9073	9073		29.15	7.1897	1	1345000	+		49239	25423	33072	33085	55607	55607					0.09229898134049108
RLRRPGPPGG	10	Unmodified	_RLRRPGPPGG_					0	0	0			REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8168334960938	2	531.817599	1061.62064	1.8637	0.00099113	-3.2612	-0.0017344	-1.3976	-0.00074324	531.8157444108199	88.686	4.0119	88.613	87.337	91.349	-0.07238					352	95	5	0	0	0	0.84112	3	9370	9180;9323;9370		37.159	8.9048	1	4423300	+		49240	25423	33072	33085	55608;55609;55610	55610					0.09229898134049108
RLRRPGPPGG	10	Unmodified	_RLRRPGPPGG_					0	0	0			REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8167724609375	2	531.817599	1061.62064	1.1723	0.00062347	-2.558	-0.0013604	-1.3857	-0.00073692	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.85939	3	9053	9053;9137;9149		27.882	4.8398	1	4413000	+		49241	25423	33072	33085	55611;55612;55613	55611					0.09229898134049108
RLRRPGPPGG	10	Unmodified	_RLRRPGPPGG_					0	0	0			REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8173217773438	2	531.817599	1061.62064	-0.053058	-2.8217E-05	-1.4964	-0.00079579	-1.5494	-0.000824	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.86452	1	8543	8543		30.504	1.3336	1	1422300	+		49242	25423	33072	33085	55614	55614					0.09229898134049108
RLRRPGPPGG	10	Unmodified	_RLRRPGPPGG_					0	0	0			REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.81689453125	2	531.817599	1061.62064	0.7269	0.00038658	-2.1356	-0.0011358	-1.4087	-0.00074918	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.85939	3	8768	8695;8768;8923		29.15	1.3402	1	4496300	+		49243	25423	33072	33085	55615;55616;55617	55616					0.09229898134049108
RLRRPGPPGG	10	Unmodified	_RLRRPGPPGG_					0	0	0			REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8164672851562	2	531.817599	1061.62064	1.0704	0.00056928	-2.3163	-0.0012319	-1.2459	-0.00066258	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.85939	4	10252	10252;10287;10334;10442		29.15	3.6994	1	4490200	+		49244	25423	33072	33085	55618;55619;55620;55621	55618					0.09229898134049108
RLRRPGPPGG	10	Unmodified	_RLRRPGPPGG_					0	0	0			REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	REV__ENST00000358055.7_2_2:220492239-220492678:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.81689453125	2	531.817599	1061.62064	-1.264	-0.00067223	-0.0037545	-1.9967E-06	-1.2678	-0.00067423	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.84112	2	10403	10403;10620		37.159	3.6435	1	4586300	+		49245	25423	33072	33085	55622;55623	55622					0.09229898134049108
RLRRQERERKF	11	Unmodified	_RLRRQERERKF_					0	0	0		ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8048095703125	3	525.309718	1572.90732	1.0321	0.00054216	0.46015	0.00024172	1.4922	0.00078388	525.3099386994652	16.699	0.43631	16.212	16.052	16.488	-0.48718					17	9	3	0	0	0	0.18343	1	152	152		8.7993	5.1802	1	125790			49246	5531	33073	33086	55624	55624					0.1437870756551547
RLRRQERERKF	11	Unmodified	_RLRRQERERKF_					0	0	0		ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.3101196289062	3	525.309718	1572.90732	3.9552	0.0020777	-0.72201	-0.00037928	3.2332	0.0016985	525.3077170758435	104.92	1.8829	105.15	104.51	106.4	0.2268					138	50	5	0	0	0	0.80361	1	12849	12849		10.587	7.1781	1	329530			49247	5531	33073	33086	55625	55625					0.1437870756551547
RLRRQERERKF	11	Unmodified	_RLRRQERERKF_					0	0	0		ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.804931640625	3	525.309718	1572.90732	0.48545	0.00025501	0.74199	0.00038978	1.2274	0.00064479	525.3100809799269	16.677	0.34694	16.067	15.912	16.259	-0.6107					16	7	3	0	0	0	0.18293	1	154	154		11.932	8.721	1	171700			49248	5531	33073	33086	55626	55626					0.1437870756551547
RLRRRLWLTME	11	Unmodified	_RLRRRLWLTME_					0	0	0		ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.81195068359375	3	510.633033	1528.87727	1.9211	0.00098099	0.14523	7.4161E-05	2.0664	0.0010552	510.63314393446103	103.24	0.32162	103.46	103.27	103.59	0.22555					12	7	2	0	0	0	0.18191	1	12523	12523		10.104	6.8926	1	267100			49249	3307	33074	33087	55627	55627					0.13398632575967895
RLRRRLWLTME	11	Unmodified	_RLRRRLWLTME_					0	0	0		ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	510.633033	1528.87727	-0.052458	-2.6787E-05	2.6776	0.0013673	2.6252	0.0013405	510.63415346129335	103.75	1.0528	103.75	103.11	104.16	-0.0035782	0.16601	0.0011895	NaN	10.104	57	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	249980			49250	3307	33074	33087							0.13398632575967895
RLRRRLWLTME	11	Unmodified	_RLRRRLWLTME_					0	0	0		ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	510.633033	1528.87727	3.0122	0.0015381	-0.77148	-0.00039394	2.2407	0.0011442	510.63261752795376	103.58	1.0176	103.54	102.99	104.01	-0.043755	-0.043622	-0.0040942	NaN	10.104	45	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	258180			49251	3307	33074	33087							0.13398632575967895
RLRRRLWLTME	11	Unmodified	_RLRRRLWLTME_					0	0	0		ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	510.633033	1528.87727	0.47507	0.00024259	2.1107	0.0010778	2.5858	0.0013204	510.63383214382606	103.51	1.0193	103.55	103.03	104.05	0.041481	-0.029743	0.00032109	NaN	10.104	55	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189750			49252	3307	33074	33087							0.13398632575967895
RLRRRLWLTME	11	Unmodified	_RLRRRLWLTME_					0	0	0		ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	510.633033	1528.87727	-0.34147	-0.00017436	2.6754	0.0013661	2.3339	0.0011918	510.6343906974688	103.17	1.3908	103.35	102.55	103.94	0.18298	-0.22774	0.001186	NaN	10.104	62	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	367650			49253	3307	33074	33087							0.13398632575967895
RLRRRLWLTME	11	Unmodified	_RLRRRLWLTME_					0	0	0		ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	510.633033	1528.87727	0.81318	0.00041524	1.7718	0.00090475	2.585	0.00132	510.63374543381474	103.3	0.85356	103.43	102.97	103.83	0.12622	-0.15205	-0.0001981	NaN	10.104	47	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	258330			49254	3307	33074	33087							0.13398632575967895
RLRRRLWLTME	11	Unmodified	_RLRRRLWLTME_					0	0	0		ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	510.633033	1528.87727	-1.5804	-0.00080698	4.0072	0.0020462	2.4269	0.0012393	510.63481472706695	103.55	0.85787	103.67	103.15	104.01	0.11494	0.08947	0.0032263	NaN	10.104	45	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272180			49255	3307	33074	33087							0.13398632575967895
RLRRRYQKKPK	11	Unmodified	_RLRRRYQKKPK_					0	0	0			REV__nc|ENSG00000167258|Q9NYV4-3|CDK12	REV__nc|ENSG00000167258|Q9NYV4-3|CDK12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.9536437988281	3	510.32682	1527.95863	0.12792	6.5281E-05	-2.6686	-0.0013618	-2.5406	-0.0012966	510.3251057651872	24.823	0.099016	24.923	24.867	24.966	0.10045					6	4	2	0	0	0	0.1838	1	874	874		3.2113	0.18535	1	41703	+		49256	21370	33075	33088	55628	55628					0.2157707633020891
RLRSIKDS	8	Unmodified	_RLRSIKDS_					0	0	0		nc|ENSG00000196632|Q9BYP7-3|WNK3;nc|ENSG00000196632|Q9BYP7-4|WNK3;nc|ENSG00000196632|Q9BYP7-2|WNK3;ENSG00000196632|ENST00000354646|WNK3	nc|ENSG00000196632|Q9BYP7-3|WNK3	nc|ENSG00000196632|Q9BYP7-3|WNK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7908020019531	2	487.790715	973.566878	0.6235	0.00030414	-1.3362	-0.00065176	-0.71266	-0.00034763	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.90523	1	7986	7986		40.778	0	1	479320			49257	8083	33076	33089	55629	55629					0.07903680911658739
RLRSLLHAKRI	11	Unmodified	_RLRSLLHAKRI_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.96551513671875	3	454.965	1361.87317	0.25168	0.0001145	3.9066	0.0017774	4.1582	0.0018919	454.9666308327424	41.348	1.1666	41.317	40.993	42.16	-0.030987					84	29	4	0	0	0	0.81021	1	3004	3004		9.2118	0.41249	1	651050	+		49258	23578	33077	33090	55630	55630					0.206709111445889
RLRSLLHAKRI	11	Unmodified	_RLRSLLHAKRI_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.9641418457031	3	454.965	1361.87317	-1.4336	-0.00065226	4.0752	0.0018541	2.6416	0.0012018	454.9667637640074	40.21	1.0197	40.799	40.26	41.28	0.58915					78	26	4	0	0	0	0.77205	1	3416	3416		17.167	3.0807	1	11642000	+		49259	23578	33077	33090	55631	55631					0.206709111445889
RLRSLPSPQ	9	Unmodified	_RLRSLPSPQ_					0	0	0		ENSG00000099338|ENST00000409235|CATSPERG;ENST00000471517.5_1_19:38845366-38853372:+|nuORF;ENST00000412458.6_1_19:38845366-38860119:+|nuORF	ENSG00000099338|ENST00000409235|CATSPERG	ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3106079101562	2	527.311815	1052.60908	0.44959	0.00023708	-1.5212	-0.00080216	-1.0716	-0.00056508	527.3109028538461	79.369	1.1902	79.786	79.02	80.21	0.41621					60	27	3	0	0	0	0.55097	1	9076	9076		49.442	1.5259	1	973190			49260	1759	33078	33091	55632	55632					0.08487656320039605
RLRSPPKKGLG	11	Unmodified	_RLRSPPKKGLG_					0	0	0		ENSG00000068078|ENST00000440486|FGFR3;nc|ENSG00000068078|P22607-2|FGFR3;nc|ENSG00000068078|P22607-4|FGFR3	ENSG00000068078|ENST00000440486|FGFR3	ENSG00000068078|ENST00000440486|FGFR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5909423828125	3	403.591051	1207.75132	-1.9386	-0.00078239	-0.42796	-0.00017272	-2.3665	-0.00095511	403.5908338947275	16.138	0.20859	16.186	16.081	16.289	0.047802					15	9	2	0	0	0	0.76322	1	125	125		12.433	0	1	93875			49261	1194	33079	33092	55633	55633					0.15575869062217862
RLRTFEVTK	9	Unmodified	_RLRTFEVTK_					0	0	0			REV__nc|ENSG00000115970|Q6YHU6-4|THADA	REV__nc|ENSG00000115970|Q6YHU6-4|THADA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.3408813476562	2	575.340572	1148.66659	-0.77132	-0.00044377	0.66457	0.00038235	-0.10675	-6.1418E-05	575.3408323014936	39.083	0.98392	39.053	38.538	39.522	-0.03027					45	22	3	0	0	0	0.76419	1	2675	2675		35.152	4.8343	1	230080	+		49262	18166	33080	33093	55634	55634					0.09820498525596122
RLRTFEVTK	9	Unmodified	_RLRTFEVTK_					0	0	0			REV__nc|ENSG00000115970|Q6YHU6-4|THADA	REV__nc|ENSG00000115970|Q6YHU6-4|THADA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.3394775390625	2	575.340572	1148.66659	-1.4031	-0.00080726	1.4395	0.00082822	0.036418	2.0953E-05	575.341163197935	38.821	0.945	38.832	38.358	39.303	0.011173					51	21	3	0	0	0	0.77244	1	2704	2704		32.812	0.061884	1	287500	+		49263	18166	33080	33093	55635	55635					0.09820498525596122
RLRTTIACSL	10	Unmodified	_RLRTTIACSL_					0	0	0		nc|ENSG00000147874|Q7Z4H7-3|HAUS6;ENSG00000147874|ENST00000380502|HAUS6;ENST00000456660.1_1_7:53930759-53931029:+|nuORF	nc|ENSG00000147874|Q7Z4H7-3|HAUS6	nc|ENSG00000147874|Q7Z4H7-3|HAUS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3306274414062	2	567.326608	1132.63866	1.8589	0.0010546	3.7505	0.0021278	5.6095	0.0031824	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.8967	1	9648	9648		9.7057	2.5123	1	15439000			49264	4926	33081	33094	55636	55636					0.07764852273862743
RLRYFLIA	8	Unmodified	_RLRYFLIA_					0	0	0		ENST00000452380.6_1_10:17194042-17210877:-|nuORF;nc|ENSG00000107614|O14717-3|TRDMT1;nc|ENSG00000107614|O14717-2|TRDMT1;ENSG00000107614|ENST00000377799|TRDMT1	ENST00000452380.6_1_10:17194042-17210877:-|nuORF	ENST00000452380.6_1_10:17194042-17210877:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3296508789062	2	526.324194	1050.63383	0.46763	0.00024613	0.25264	0.00013297	0.72027	0.0003791	526.324215984377	60.996	0.63423	61.115	60.526	61.16	0.11901					47	25	2	0	0	0	0.86791	1	5275	5275		28.254	4.0515	1	224710			49265	2355	33082	33095	55637	55637					0.110543361934333
RLRYFLIA	8	Unmodified	_RLRYFLIA_					0	0	0		ENST00000452380.6_1_10:17194042-17210877:-|nuORF;nc|ENSG00000107614|O14717-3|TRDMT1;nc|ENSG00000107614|O14717-2|TRDMT1;ENSG00000107614|ENST00000377799|TRDMT1	ENST00000452380.6_1_10:17194042-17210877:-|nuORF	ENST00000452380.6_1_10:17194042-17210877:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.325927734375	2	526.324194	1050.63383	-0.53497	-0.00028157	1.5071	0.00079323	0.97214	0.00051166	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.9159	1	5294	5294		44.531	2.0566	1	220370			49266	2355	33082	33095	55638	55638					0.110543361934333
RLRYLLAF	8	Unmodified	_RLRYLLAF_					0	0	0			REV__ENSG00000204311|ENST00000644580|PJVK	REV__ENSG00000204311|ENST00000644580|PJVK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3261108398438	2	526.324194	1050.63383	-0.53497	-0.00028157	1.5071	0.00079323	0.97214	0.00051166	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.86791	1	5268	5268		28.254	2.8041	1	220370	+		49267	23481	33083	33096	55639	55639					0.11054336193410563
RLSAGGGPVGG	11	Unmodified	_RLSAGGGPVGG_					0	0	0			REV__ENST00000433464.5_1_7:72985200-72985623:-|nuORF	REV__ENST00000433464.5_1_7:72985200-72985623:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2525329589844	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.68532	1	8871	8871		33.922	0.42865	1	1673200	+		49268	26650	33084	33097	55640	55640					0.027191324691898444
RLSCTGSHGR	10	Unmodified	_RLSCTGSHGR_					0	0	0			REV__nc|ENSG00000106078|O75128-6|COBL	REV__nc|ENSG00000106078|O75128-6|COBL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.2667236328125	2	537.267081	1072.51961	0.37189	0.0001998	-1.0108	-0.00054309	-0.63896	-0.00034329	537.2664300657294	31.923	0.70452	31.917	31.616	32.32	-0.0061455					37	16	3	0	0	0	0.86471	1	1786	1786		30.318	1.1682	1	172920	+		49269	17596	33085	33098	55641	55641					-0.013749216309861367
RLSFGLSR	8	Unmodified	_RLSFGLSR_					0	0	0		ENST00000548084.1_1_12:57118972-57119053:-|nuORF	ENST00000548084.1_1_12:57118972-57119053:-|nuORF	ENST00000548084.1_1_12:57118972-57119053:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2739562988281	2	468.274701	934.534849	0.98407	0.00046081	-0.943	-0.00044159	0.041063	1.9229E-05	468.27415231648797	16.57	0.50453	16.647	16.403	16.907	0.07715					32	18	3	0	0	0	0.8621	1	126	126		26.693	1.1189	1	88321			49270	13617	33086	33099	55642	55642					0.06496313228512918
RLSFPNLFK	9	Unmodified	_RLSFPNLFK_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3265991210938	2	561.326934	1120.63931	-0.26757	-0.00015019	0.21762	0.00012216	-0.049943	-2.8034E-05	561.3268339242239	62.486	1.1714	62.874	62.403	63.575	0.38779					62	26	3	0	0	0	0.26953	1	6708	6708		67.494	6.5217	1	463100			49271	8802	33087	33100	55643	55643					0.08382014985227215
RLSGNKLSN	9	Unmodified	_RLSGNKLSN_					0	0	0			REV__ENST00000467897.2_1_7:27168846-27192162:-|nuORF	REV__ENST00000467897.2_1_7:27168846-27192162:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.78021240234375	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.76764	1	8383	8383		34.173	2.2177	1	569520	+		49272	27170	33088	33101	55644	55644					0.05187090532001548
RLSKQVLPHDS	11	Unmodified	_RLSKQVLPHDS_					0	0	0		ENSG00000083168|ENST00000265713|KAT6A	ENSG00000083168|ENST00000265713|KAT6A	ENSG00000083168|ENST00000265713|KAT6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3585205078125	2	640.359493	1278.70443	-0.067952	-4.3514E-05	-0.91045	-0.00058301	-0.9784	-0.00062653	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.69931	1	10647	10647		31.634	2.4642	1	640120			49273	1498	33089	33102	55645	55645					0.07622964720417258
RLSKVAVP	8	Unmodified	_RLSKVAVP_					0	0	0			REV__ENSG00000174292|ENST00000688331|TNK1	REV__ENSG00000174292|ENST00000688331|TNK1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.281982421875	2	435.281995	868.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.012	1	67.975	67.475	68.475	-0.036301								0	0	0	0.29631	1	6546	6546		25.45	0	1		+		49274	21983	33090	33103	55646	55646					0.10990385376658196
RLSPKAAE	8	Unmodified	_RLSPKAAE_					0	0	0		ENSG00000177706|ENST00000313766|FAM20C	ENSG00000177706|ENST00000313766|FAM20C	ENSG00000177706|ENST00000313766|FAM20C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.75628662109375	2	436.253434	870.492316	2.1857	0.00095352	1.2941	0.00056457	3.4798	0.0015181	436.2538705634068	114.35	2.7328	114.38	114.11	116.84	0.026459					117	82	2	0	0	0	0.90983	1	12669	12669		42.396	4.5846	1	78531			49275	7160	33091	33104	55647	55647					0.05188918100270712
RLSPQPGLALR	11	Unmodified	_RLSPQPGLALR_					0	0	0			REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2467346191406	3	403.247173	1206.71969	2.718	0.001096	-3.4576	-0.0013942	-0.73958	-0.00029823	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.7144	1	11595	11595		20.315	1.0523	1	15597000	+		49276	20776	33092	33105	55648	55648					0.12459876308253115
RLSPSDKYP	9	Unmodified	_RLSPSDKYP_					0	0	0		ENSG00000109101|ENST00000579795|FOXN1	ENSG00000109101|ENST00000579795|FOXN1	ENSG00000109101|ENST00000579795|FOXN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.7823486328125	2	531.782556	1061.55056	-0.45981	-0.00024452	0.04954	2.6344E-05	-0.41027	-0.00021817	531.7825831037422	29.277	2.7619	29.248	28.206	30.968	-0.029207					186	63	5	0	0	0	0.12652	1	1813	1813		87.754	12.711	1	10622000			49277	2448	33093	33106	55649	55649					0.022245549548870258
RLSQLRLAQK	10	Unmodified	_RLSQLRLAQK_					0	0	0			REV__ENST00000247843.6_1_12:69783965-69784016:+|nuORF	REV__ENST00000247843.6_1_12:69783965-69784016:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.923095703125	3	404.922689	1211.74624	1.8224	0.00073792	-1.3466	-0.00054527	0.47577	0.00019265	404.9219764261746	20.439	0.63909	19.98	19.641	20.28	-0.4591					29	13	3	0	0	0	0.86409	1	658	658		25.126	0	1	145330	+		49278	24269	33094	33107	55650	55650					0.1488356519955687
RLSQMVAR	8	Unmodified	_RLSQMVAR_					0	0	0			REV__ENSG00000204175|ENST00000374314|GPRIN2	REV__ENSG00000204175|ENST00000374314|GPRIN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.7711181640625	2	480.774011	959.533469	-1.1927	-0.00057344	-3.9939	-0.0019201	-5.1866	-0.0024936	480.7719026747457	41.087	0.70248	41.046	40.786	41.489	-0.04081					37	19	3	0	0	0	0.91472	1	3063	3063		44.117	1.6423	1	473220	+		49279	23466	33095	33108	55651	55651					0.05208355868103354
RLSRAPASS	9	Unmodified	_RLSRAPASS_					0	0	0			REV__ENST00000551489.5_1_12:107349705-107350883:+|nuORF	REV__ENST00000551489.5_1_12:107349705-107350883:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.76708984375	2	472.76724	943.519927	-0.10807	-5.1094E-05	0.17013	8.0433E-05	0.062057	2.9339E-05	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.7932	1	8551	8551		24.519	0	1	501240	+		49280	28607	33096	33109	55652	55652					0.045908213605116543
RLSRIELLRG	10	Unmodified	_RLSRIELLRG_					0	0	0			REV__AluSz_dup47996|chr9:36681508-36681817:-|1.64201677267165|0.0574684267580931|4.84|63.0|5|2|sense	REV__AluSz_dup47996|chr9:36681508-36681817:-|1.64201677267165|0.0574684267580931|4.84|63.0|5|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.9229431152344	3	404.922689	1211.74624	2.788	0.0011289	-2.2292	-0.00090265	0.5588	0.00022627	404.92169157251993	26.492	2.181	26.459	26.021	28.202	-0.032125					96	52	4	0	0	0	0.85086	1	1124	1124		19.263	1.7947	1	297020	+		49281	15399	33097	33110	55653	55653					0.14883565199579607
RLSRPHVPEA	10	Unmodified	_RLSRPHVPEA_					0	0	0			REV__ENST00000342232.4_1_8:75233190-75233559:-|nuORF	REV__ENST00000342232.4_1_8:75233190-75233559:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	581.325439453125	2	581.327996	1160.64144	-1.0714	-0.00062282	-0.57287	-0.00033303	-1.6442	-0.00095585	581.3275578322612	49.481	0.56482	49.481	49.229	49.794	0					20	12	2	0	0	0	0.70553	1	3896	3896		44.377	2.9506	1	76713	+		49282	25270	33098	33111	55654	55654					0.06754443723048098
RLSRPHVPEA	10	Unmodified	_RLSRPHVPEA_					0	0	0			REV__ENST00000342232.4_1_8:75233190-75233559:-|nuORF	REV__ENST00000342232.4_1_8:75233190-75233559:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	581.327996	1160.64144	-1.0714	-0.00062282	-0.57287	-0.00033303	-1.6442	-0.00095585	581.3275578322612	49.481	0.56482	49.481	49.229	49.794	0	0.028936	1.3937E-05	NaN	44.377	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76713	+		49283	25270	33098	33111							0.06754443723048098
RLSRPHVPEA	10	Unmodified	_RLSRPHVPEA_					0	0	0			REV__ENST00000342232.4_1_8:75233190-75233559:-|nuORF	REV__ENST00000342232.4_1_8:75233190-75233559:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	581.327996	1160.64144	-0.71209	-0.00041396	-0.81621	-0.00047449	-1.5283	-0.00088845	581.3272896137179	49.444	0.3549	49.441	49.225	49.58	-0.0030327	-0.010391	-0.00026898	NaN	44.377	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49410	+		49284	25270	33098	33111							0.06754443723048098
RLSRPHVPEA	10	Unmodified	_RLSRPHVPEA_					0	0	0			REV__ENST00000342232.4_1_8:75233190-75233559:-|nuORF	REV__ENST00000342232.4_1_8:75233190-75233559:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	581.327996	1160.64144	-0.56718	-0.00032972	-0.43857	-0.00025495	-1.0057	-0.00058467	581.3275427633374	49.43	0.48592	49.433	49.191	49.677	0.0035973	-0.018545	0.00017009	NaN	44.377	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56857	+		49285	25270	33098	33111							0.06754443723048098
RLSSRMAVKLS	11	Unmodified	_RLSSRMAVKLS_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	624.3739624023438	2	624.366264	1246.71798	3.9932	0.0024932	1.651	0.0010308	5.6441	0.003524	624.3671230613811	103.41	0.59944	103.67	103.46	104.06	0.26524					22	13	2	0	0	0	0.69248	1	12645	12645		32.751	0	1	2378900	+		49286	18069	33099	33112	55655	55655					0.10448499228027686
RLSSRMAVKLS	11	Unmodified	_RLSSRMAVKLS_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	624.366264	1246.71798	-0.254	-0.00015859	6.6714	0.0041654	6.4174	0.0040068	624.8718974377357	103.65	0.3128	103.64	103.47	103.78	-0.0035782	-0.00044096	0.0037903	NaN	32.751	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139430	+		49287	18069	33099	33112							0.10448499228027686
RLSSRMAVKLS	11	Unmodified	_RLSSRMAVKLS_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	624.366264	1246.71798	2.9374	0.001834	3.2116	0.0020052	6.149	0.0038392	624.8696131557816	103.64	0.3134	103.6	103.37	103.68	-0.043755	-0.04297	-0.00053005	NaN	32.751	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173070	+		49288	18069	33099	33112							0.10448499228027686
RLSSRMAVKLS	11	Unmodified	_RLSSRMAVKLS_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	624.366264	1246.71798	1.3431	0.00083859	4.7068	0.0029388	6.0499	0.0037774	624.8711050606543	103.41	0.71538	103.6	103.39	104.11	0.18297	-0.047291	0.001337	NaN	32.751	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	322160	+		49289	18069	33099	33112							0.10448499228027686
RLSSRMAVKLS	11	Unmodified	_RLSSRMAVKLS_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	624.366264	1246.71798	0.92404	0.00057694	5.161	0.0032223	6.085	0.0037993	624.8711023820354	103.53	0.42709	103.65	103.44	103.87	0.12622	0.0081006	0.0019042	NaN	32.751	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	266080	+		49290	18069	33099	33112							0.10448499228027686
RLSVTRRLQWL	11	Unmodified	_RLSVTRRLQWL_					0	0	0			REV__ENST00000405515.5_2_11:67957596-67981223:-|nuORF	REV__ENST00000405515.5_2_11:67957596-67981223:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6242370605469	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.8498	1	12708	12708		6.001	0	1	2577100	+		49291	26292	33100	33113	55656	55656					0.1557490104507906
RLSYVFPIKLL	11	Unmodified	_RLSYVFPIKLL_					0	0	0			REV__nc|ENSG00000156096|P06133-3|UGT2B4	REV__nc|ENSG00000156096|P06133-3|UGT2B4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.7366943359375	3	450.283224	1347.82784	-0.33827	-0.00015232	-1.4967	-0.00067393	-1.8349	-0.00082624	450.2822054468864	53.938	0.58408	54.522	54.459	55.043	0.58474					20	13	2	0	0	0	0.1767	1	5554	5554		13.508	0.55046	1	188510	+		49292	20467	33101	33114	55657	55657					0.16784247838836563
RLTAARRRD	9	Unmodified	_RLTAARRRD_					0	0	0			REV__ENSG00000122180|ENST00000241651|MYOG	REV__ENSG00000122180|ENST00000241651|MYOG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.8281860351562	2	557.831237	1113.64792	0.85904	0.0004792	-1.6782	-0.00093613	-0.81912	-0.00045693	557.8303228390891	100.95	1.6407	101.1	100.55	102.19	0.14352					87	39	3	0	0	0	0.7932	1	10587	10587		26.693	2.1737	1	700710	+		49293	18482	33102	33115	55658	55658					0.09564381674408651
RLTAEQAR	8	Unmodified	_RLTAEQAR_					0	0	0		ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.7789611816406	2	472.76724	943.519927	-0.25564	-0.00012086	0.018256	8.6306E-06	-0.23739	-0.00011223	472.76720033950204	82.193	0.77222	82.62	82.352	83.124	0.42645					28	18	2	0	0	0	0.4196	1	9460	9460		53.351	24.202	1	150570			49294	3668	33103	33116	55659	55659					0.045908213605116543
RLTALVGASN	10	Unmodified	_RLTALVGASN_					0	0	0			REV__nc|ENSG00000162813|O95861-3|BPNT1	REV__nc|ENSG00000162813|O95861-3|BPNT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29022216796875	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.86106	1	8585	8585		33.922	0.40605	1	2850500	+		49295	20850	33104	33117	55660	55660					0.06628261191792717
RLTAREPKKSP	11	Unmodified	_RLTAREPKKSP_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8825073242188	2	641.883136	1281.75172	-1.1529	-0.00074004	0.033515	2.1513E-05	-1.1194	-0.00071853	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.732	1	10167	10167		26.063	0	1	3521600			49296	5333	33105	33118	55661	55661					0.12211243991396259
RLTARSLSA	9	Unmodified	_RLTARSLSA_					0	0	0		ENST00000284486.8_1_8:11302061-11302304:-|nuORF	ENST00000284486.8_1_8:11302061-11302304:-|nuORF	ENST00000284486.8_1_8:11302061-11302304:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.79071044921875	2	487.790715	973.566878	-0.085708	-4.1808E-05	-0.32837	-0.00016018	-0.41408	-0.00020199	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.7932	1	8192	8192		25.574	0	1	514950			49297	9648	33106	33119	55662	55662					0.07903680911658739
RLTARSLSA	9	Unmodified	_RLTARSLSA_					0	0	0		ENST00000284486.8_1_8:11302061-11302304:-|nuORF	ENST00000284486.8_1_8:11302061-11302304:-|nuORF	ENST00000284486.8_1_8:11302061-11302304:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7908935546875	2	487.790715	973.566878	0.84663	0.00041298	-1.0594	-0.00051676	-0.21277	-0.00010379	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.78124	1	8496	8496		30.318	0	1	2238600			49298	9648	33106	33119	55663	55663					0.07903680911658739
RLTATDVKK	9	Unmodified	_RLTATDVKK_					0	0	0			REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	REV__nc|ENSG00000131018|Q8NF91-4|SYNE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.311767578125	2	516.314023	1030.61349	0.96653	0.00049903	-1.1711	-0.00060464	-0.20454	-0.0001056	516.3133887311924	32.644	2.0073	32.856	32.593	34.6	0.21168					79	47	2	0	0	0	0.77244	1	2301	2301		32.812	4.5581	1	535970	+		49299	18928	33107	33120	55664	55664					0.09941120742928433
RLTFLLFSH	9	Unmodified	_RLTFLLFSH_					0	0	0		ENST00000565698.5_2_16:28109346-28109856:-|nuORF	ENST00000565698.5_2_16:28109346-28109856:-|nuORF	ENST00000565698.5_2_16:28109346-28109856:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.32568359375	2	567.326934	1132.63931	1.3743	0.0007797	3.9991	0.0022688	5.3735	0.0030485	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.77244	1	11077	11077		32.812	1.2826	1	6182600			49300	13920	33108	33121	55665	55665					0.07830014985211164
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.88427734375	2	641.879873	1281.74519	-0.076643	-4.9196E-05	4.1722	0.0026781	4.0956	0.0026289	641.8824265545632	96.25	1.6726	96.25	95.357	97.03	0					110	38	3	0	0	0	0.69995	1	9679	9679		31.53	5.9558	1	839370			49301	13312	33109	33122	55666	55666					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8822021484375	2	641.879873	1281.74519	-0.046993	-3.0164E-05	4.1398	0.0026572	4.0928	0.0026271	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.64498	3	9958	9756;9803;9958		39.253	7.0106	1	2217900			49302	13312	33109	33122	55667;55668;55669	55669					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.881591796875	2	641.879873	1281.74519	-0.050339	-3.2311E-05	4.1684	0.0026756	4.118	0.0026433	641.8823954757748	95.916	2.4458	95.982	94.508	96.954	0.06591					198	57	4	0	0	0	0.65746	3	10015	10015;10122;10133		37.812	3.8899	1	1572400			49303	13312	33109	33122	55670;55671;55672	55670					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8818969726562	2	641.879873	1281.74519	-0.050098	-3.2157E-05	4.1133	0.0026402	4.0632	0.0026081	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.66929	2	10312	10288;10312		36.447	8.3653	1	3644700			49304	13312	33109	33122	55673;55674	55674					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8817749023438	2	641.879873	1281.74519	1.9607	0.0012585	2.0579	0.0013209	4.0186	0.0025794	641.8810415769531	95.839	2.2822	95.782	94.474	96.756	-0.057526					187	53	4	0	0	0	0.66929	1	10345	10345		36.447	0	1	1600600			49305	13312	33109	33122	55675	55675					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8828735351562	2	641.879873	1281.74519	2.2004	0.0014124	1.7915	0.0011499	3.9918	0.0025623	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.69995	4	10406	10406;10452;10656;10717		31.53	7.7381	1	3624200			49306	13312	33109	33122	55676;55677;55678;55679	55676					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8828125	2	641.879873	1281.74519	1.6835	0.0010806	2.3587	0.001514	4.0421	0.0025946	641.8812254430574	95.773	2.4493	95.82	94.333	96.782	0.046989					202	57	5	0	0	0	0.66929	1	10212	10212		36.447	10.873	1	1550900			49307	13312	33109	33122	55680	55680					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.882080078125	2	641.879873	1281.74519	1.6823	0.0010798	2.3496	0.0015082	4.0319	0.002588	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.66929	4	10410	10268;10292;10303;10410		36.447	4.9169	1	3772700			49308	13312	33109	33122	55681;55682;55683;55684	55684					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8822631835938	2	641.879873	1281.74519	1.5974	0.0010254	2.3734	0.0015235	3.9709	0.0025488	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.69995	6	10199	10030;10043;10138;10199;10262;10274		31.53	2.3598	1	4266200			49309	13312	33109	33122	55685;55686;55687;55688;55689;55690	55688					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8825073242188	2	641.879873	1281.74519	0.89498	0.00057447	3.0248	0.0019416	3.9198	0.0025161	641.8816647321656	95.707	2.6304	95.87	94.248	96.878	0.16316					218	62	4	0	0	0	0.66929	1	9897	9897		36.447	10.873	1	2156900			49310	13312	33109	33122	55691	55691					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8822021484375	2	641.879873	1281.74519	0.91411	0.00058675	3.0861	0.0019809	4.0002	0.0025677	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.69995	4	10076	10040;10076;10088;10195		31.53	4.7437	1	4136300			49311	13312	33109	33122	55692;55693;55694;55695	55693					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8817749023438	2	641.879873	1281.74519	1.4722	0.00094496	2.5305	0.0016243	4.0027	0.0025692	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.61369	3	11730	11683;11730;11828		42.864	16.171	1	4511200			49312	13312	33109	33122	55696;55697;55698	55697					0.11559027559042079
RLTGKPRRPMA	11	Unmodified	_RLTGKPRRPMA_					0	0	0		ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	ENST00000528804.1_1_14:24682355-24682604:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8820190429688	2	641.879873	1281.74519	2.6248	0.0016848	1.4133	0.00090718	4.0381	0.002592	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.69995	2	11761	11761;11773		31.53	2.3598	1	4455800			49313	13312	33109	33122	55699;55700	55699					0.11559027559042079
RLTIAQIKEH	10	Unmodified	_RLTIAQIKEH_					0	0	0		ENSG00000170145|ENST00000304987|SIK2	ENSG00000170145|ENST00000304987|SIK2	ENSG00000170145|ENST00000304987|SIK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5748291015625	3	403.575178	1207.70371	-1.8238	-0.00073605	0.70537	0.00028467	-1.1185	-0.00045138	403.575388315242	82.768	3.2423	82.923	82.261	85.503	0.15474					165	75	3	0	0	0	0.86106	1	8058	8058		33.922	2.2874	1	1511600			49314	6562	33110	33123	55701	55701					0.10816170071370834
RLTISNPTSA	10	Unmodified	_RLTISNPTSA_					0	0	0		ENST00000478527.1_1_7:3990577-3991593:+|nuORF;nc|ENSG00000146555|Q7Z5N4-3|SDK1;ENSG00000146555|ENST00000404826|SDK1	ENST00000478527.1_1_7:3990577-3991593:+|nuORF	ENST00000478527.1_1_7:3990577-3991593:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2933959960938	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.8545	1	9475	9475		36.447	0	1	1864800			49315	4851	33111	33124	55702	55702					0.04507939983614051
RLTKAKVSD	9	Unmodified	_RLTKAKVSD_					0	0	0			REV__nc|ENSG00000169398|Q05397-4|PTK2	REV__nc|ENSG00000169398|Q05397-4|PTK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.3056945800781	2	509.306198	1016.59784	0.74223	0.00037802	-1.438	-0.00073237	-0.69576	-0.00035435	509.305324720209	92.968	1.4156	93.127	92.667	94.082	0.15875					103	33	4	0	0	0	0.73802	1	9466	9466		37.812	0.65241	1	2131200	+		49316	21576	33112	33125	55703	55703					0.09020834225896124
RLTKGKFAVM	10	Unmodified	_RLTKGKFAVM_					0	0	0		nc|ENSG00000166575|Q86UB9-2|TMEM135;ENSG00000166575|ENST00000305494|TMEM135	nc|ENSG00000166575|Q86UB9-2|TMEM135	nc|ENSG00000166575|Q86UB9-2|TMEM135	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8429565429688	2	575.841894	1149.66923	0.91732	0.00052823	0.78637	0.00045282	1.7037	0.00098106	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.86218	1	9535	9535		32.812	4.9302	1	5468500			49317	6210	33113	33126	55704	55704					0.10038630658914371
RLTKGKFAVM	10	Unmodified	_RLTKGKFAVM_					0	0	0		nc|ENSG00000166575|Q86UB9-2|TMEM135;ENSG00000166575|ENST00000305494|TMEM135	nc|ENSG00000166575|Q86UB9-2|TMEM135	nc|ENSG00000166575|Q86UB9-2|TMEM135	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.84326171875	2	575.841894	1149.66923	0.61103	0.00035186	1.1234	0.0006469	1.7344	0.00099876	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.86348	1	9287	9287		31.53	1.2121	1	6623700			49318	6210	33113	33126	55705	55705					0.10038630658914371
RLTKHTTT	8	Unmodified	_RLTKHTTT_					0	0	0			REV__nc|ENSG00000182199|P34897-3|SHMT2;REV__nc|ENSG00000176974|P34896-4|SHMT1	REV__nc|ENSG00000182199|P34897-3|SHMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2775573730469	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.8537	2	8711	8567;8711		27.882	1.3713	1	7040000	+		49319	22508;22166	33114	33127	55706;55707	55707					0.06031992020314192
RLTKHTTT	8	Unmodified	_RLTKHTTT_					0	0	0			REV__nc|ENSG00000182199|P34897-3|SHMT2;REV__nc|ENSG00000176974|P34896-4|SHMT1	REV__nc|ENSG00000182199|P34897-3|SHMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27752685546875	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.86677	1	8289	8289		27.882	2.3082	1	6441000	+		49320	22508;22166	33114	33127	55708	55708					0.06031992020314192
RLTKHTTT	8	Unmodified	_RLTKHTTT_					0	0	0			REV__nc|ENSG00000182199|P34897-3|SHMT2;REV__nc|ENSG00000176974|P34896-4|SHMT1	REV__nc|ENSG00000182199|P34897-3|SHMT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2799377441406	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.86677	1	9814	9814		27.882	2.3082	1	5642300	+		49321	22508;22166	33114	33127	55709	55709					0.06031992020314192
RLTKKKKK	8	Unmodified	_RLTKKKKK_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|4|1|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.3660888671875	2	515.366393	1028.71823	3.0895	0.0015922	-2.8503	-0.0014689	0.23922	0.00012328	515.3649456454685	109.06	0.4231	109.03	108.79	109.21	-0.029381					33	15	3	0	0	0	0.84191	1	12096	12096		11.511	3.8207	1	2999800	+		49322	29552	33115	33128	55710	55710					0.20502287010162945
RLTKKKKK	8	Unmodified	_RLTKKKKK_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|4|1|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.3649291992188	2	515.366393	1028.71823	0.80564	0.0004152	-0.65283	-0.00033645	0.15281	7.8753E-05	515.366087242878	109.05	0.38199	109.08	108.85	109.24	0.033096					40	17	3	0	0	0	0.96673	1	11972	11972		3.9852	0	1	3407000	+		49323	29552	33115	33128	55711	55711					0.20502287010162945
RLTKKKKK	8	Unmodified	_RLTKKKKK_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|4|1|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	515.3648071289062	2	515.366393	1028.71823	0.81757	0.00042135	-0.46421	-0.00023924	0.35335	0.00018211	515.3661768227523	109.06	0.33616	109.14	108.9	109.24	0.078552					20	14	2	0	0	0	0.89294	1	11729	11729		7.1934	2.8771	1	1615900	+		49324	29552	33115	33128	55712	55712					0.20502287010162945
RLTKKKKK	8	Unmodified	_RLTKKKKK_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|4|1|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	515.3616943359375	2	515.366393	1028.71823	-1.565	-0.00080653	2.0152	0.0010386	0.45023	0.00023204	515.3675277002984	109	0.29034	109.02	108.86	109.15	0.020561					24	14	2	0	0	0	0.96673	1	11647	11647		3.9852	2.6576	1	842840	+		49325	29552	33115	33128	55713	55713					0.20502287010162945
RLTKPKHIHS	10	Unmodified	_RLTKPKHIHS_					0	0	0			REV__ENST00000359314.5_1_6:47501434-47512410:+|nuORF	REV__ENST00000359314.5_1_6:47501434-47512410:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.5840148925781	3	406.247285	1215.72002	5.5965	0.0022736	-0.24909	-0.00010119	5.3474	0.0021724	406.581695337414	111.5	0.49822	111.55	111.24	111.74	0.049095					37	18	3	0	0	0	0.85086	1	13528	13528		19.263	0	1	805300	+		49326	25457	33116	33129	55714	55714					0.12079296028127828
RLTKVSKT	8	Unmodified	_RLTKVSKT_					0	0	0			REV__ENSG00000135914|ENST00000258400|HTR2B	REV__ENSG00000135914|ENST00000258400|HTR2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.79766845703125	2	466.798009	931.581465	0.98178	0.00045829	-1.6856	-0.00078684	-0.70384	-0.00032855	466.7969983674982	18.812	1.0462	18.886	18.723	19.769	0.073465					58	33	3	0	0	0	0.8347	1	329	329		23.042	4.7181	1	203960	+		49327	19267	33117	33130	55715	55715					0.11293753059806022
RLTKYSGKVLS	11	Unmodified	_RLTKYSGKVLS_					0	0	0			REV__ENSG00000138771|ENST00000296043|SHROOM3	REV__ENSG00000138771|ENST00000296043|SHROOM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3793334960938	2	626.374612	1250.73467	2.9096	0.0018225	4.2134	0.0026392	7.123	0.0044617	626.3771603031328	107.89	0.4325	107.86	107.51	107.94	-0.031487					32	10	4	0	0	0	0.72106	1	11939	11939		28.081	1.0342	1	11845000	+		49328	19505	33118	33131	55716	55716					0.11933323385619587
RLTLLRPKKD	10	Unmodified	_RLTLLRPKKD_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.93231201171875	3	413.934706	1238.78229	-0.38357	-0.00015877	-4.3232	-0.0017895	-4.7068	-0.0019483	413.9328988978551	44.689	3.4482	44.631	43.515	46.963	-0.058262					186	88	3	0	0	0	0.85285	1	3283	3283		16.717	1.3843	1	587780			49329	7373	33119	33132	55717	55717					0.1724502237645993
RLTMALTGPFL	11	Oxidation (M)	_RLTM(Oxidation (M))ALTGPFL_		RLTM(1)ALTGPFL		RLTM(43)ALTGPFL	0	0	1			REV__ENST00000483551.6_1_15:69082217-69082433:-|nuORF	REV__ENST00000483551.6_1_15:69082217-69082433:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.3468627929688	2	618.344466	1234.67438	-0.32375	-0.00020019	2.6984	0.0016685	2.3747	0.0014684	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.61369	1	10470	10470		42.864	10.052	1	926440	+		49330	27493	33120	33133	55718	55718		411			0.06642889730869683
RLTMRFPR	8	Unmodified	_RLTMRFPR_					0	0	0			REV__nc|ENSG00000156050|Q96MY7-2|FAM161B	REV__nc|ENSG00000156050|Q96MY7-2|FAM161B	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.326904296875	2	538.810928	1075.6073	-0.53674	-0.0002892	-0.86528	-0.00046622	-1.402	-0.00075543	538.809853058897	101.55	0.20889	101.55	101.41	101.62	0					5	4	2	0	0	0	0.4196	1	10329	10329		31.955	11.958	1	101990	+		49331	29948	33121	33134	55719	55719					0.07252324030446289
RLTPAGRRPL	10	Unmodified	_RLTPAGRRPL_					0	0	0			REV__nc|ENSG00000117602|Q9UKA8-4|RCAN3	REV__nc|ENSG00000117602|Q9UKA8-4|RCAN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8544921875	2	568.854181	1135.69381	0.52259	0.00029728	-2.4856	-0.0014139	-1.963	-0.0011166	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.74274	1	10849	10849		42.396	3.59	1	84800000	+		49332	29803	33122	33135	55720	55720					0.1313902685665198
RLTPAPLRSQL	11	Unmodified	_RLTPAPLRSQL_					0	0	0		ENST00000412023.5_1_12:6982564-6991452:+|nuORF	ENST00000412023.5_1_12:6982564-6991452:+|nuORF	ENST00000412023.5_1_12:6982564-6991452:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.92236328125	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.74763	1	11428	11428		32.034	12.771	1	19495000			49333	11334	33123	33136	55721	55721					0.1305614547973164
RLTQAIKN	8	Unmodified	_RLTQAIKN_					0	0	0			REV__ENSG00000228567|ENST00000311170|VN1R4	REV__ENSG00000228567|ENST00000311170|VN1R4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.287841796875	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.89962	1	9942	9942		38.806	6.8513	1	50946000	+		49334	23750	33124	33137	55722	55722					0.08748582399982752
RLTQAIKN	8	Unmodified	_RLTQAIKN_					0	0	0			REV__ENSG00000228567|ENST00000311170|VN1R4	REV__ENSG00000228567|ENST00000311170|VN1R4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.28778076171875	2	472.287808	942.561064	1.4182	0.00066978	-1.3444	-0.00063493	0.07378	3.4846E-05	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.90983	1	11345	11345		42.396	3.1433	1	21289000	+		49335	23750	33124	33137	55723	55723					0.08748582399982752
RLTQKPTGG	9	Unmodified	_RLTQKPTGG_					0	0	0		chr2:188517658-188522756|14|11.57|0.13|6.53|+|0|TE_info:HAL1,HAL1_dup3632,L1,LINE,donor,-,188517284,188517658|None,GULP1|8	chr2:188517658-188522756|14|11.57|0.13|6.53|+|0|TE_info:HAL1,HAL1_dup3632,L1,LINE,donor,-,188517284,188517658|None,GULP1|8	chr2:188517658-188522756|14|11.57|0.13|6.53|+|0|TE_info:HAL1,HAL1_dup3632,L1,LINE,donor,-,188517284,188517658|None,GULP1|8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2776184082031	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.66686	1	7997	7997		42.864	7.246	1	2142700			49336	320	33125	33138	55724	55724					0.06031992020336929
RLTQKPTGG	9	Unmodified	_RLTQKPTGG_					0	0	0		chr2:188517658-188522756|14|11.57|0.13|6.53|+|0|TE_info:HAL1,HAL1_dup3632,L1,LINE,donor,-,188517284,188517658|None,GULP1|8	chr2:188517658-188522756|14|11.57|0.13|6.53|+|0|TE_info:HAL1,HAL1_dup3632,L1,LINE,donor,-,188517284,188517658|None,GULP1|8	chr2:188517658-188522756|14|11.57|0.13|6.53|+|0|TE_info:HAL1,HAL1_dup3632,L1,LINE,donor,-,188517284,188517658|None,GULP1|8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27728271484375	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.75725	1	8121	8121		36.447	0.82846	1	6441000			49337	320	33125	33138	55725	55725					0.06031992020336929
RLTQPFFIK	9	Unmodified	_RLTQPFFIK_					0	0	0			REV__ENSG00000005156|ENST00000378526|LIG3	REV__ENSG00000005156|ENST00000378526|LIG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3453369140625	2	575.342584	1148.67061	2.6142	0.0015041	2.7738	0.0015959	5.388	0.0031	575.3441275619858	98.676	2.5508	98.621	98.113	100.66	-0.054825					162	58	5	0	0	0	0.77244	1	10684	10684		32.812	4.9302	1	4409300	+		49338	16076	33126	33139	55726	55726					0.10222588019314571
RLTQVHTSLQP	11	Unmodified	_RLTQVHTSLQP_					0	0	0		ENST00000600466.1_1_19:50306521-50306755:+|nuORF	ENST00000600466.1_1_19:50306521-50306755:+|nuORF	ENST00000600466.1_1_19:50306521-50306755:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3602905273438	2	640.359493	1278.70443	1.5852	0.0010151	-2.6843	-0.0017189	-1.099	-0.00070379	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.6493	1	10446	10446		38.754	0.94209	1	616450			49339	14381	33127	33140	55727	55727					0.07622964720439995
RLTRASLAS	9	Unmodified	_RLTRASLAS_					0	0	0		ENST00000308219.13_1_11:1482541-1482889:+|nuORF	ENST00000308219.13_1_11:1482541-1482889:+|nuORF	ENST00000308219.13_1_11:1482541-1482889:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.790771484375	2	487.790715	973.566878	0.84663	0.00041298	-1.0594	-0.00051676	-0.21277	-0.00010379	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.7932	1	8627	8627		24.519	0.015177	1	2238600			49340	9884	33128	33141	55728	55728					0.07903680911658739
RLTRASLAS	9	Unmodified	_RLTRASLAS_					0	0	0		ENST00000308219.13_1_11:1482541-1482889:+|nuORF	ENST00000308219.13_1_11:1482541-1482889:+|nuORF	ENST00000308219.13_1_11:1482541-1482889:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7906494140625	2	487.790715	973.566878	-1.5393	-0.00075085	1.3207	0.00064423	-0.21857	-0.00010661	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.77696	1	8163	8163		31.53	1.0262	1	1760400			49341	9884	33128	33141	55729	55729					0.07903680911658739
RLTRVPTG	8	Unmodified	_RLTRVPTG_					0	0	0			REV__nc|ENSG00000182541|P53671-2|LIMK2	REV__nc|ENSG00000182541|P53671-2|LIMK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.27435302734375	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.89043	1	9186	9186		35.618	5.1146	1	26247000	+		49342	22531	33129	33142	55730	55730					0.08152313228515595
RLTRVPTG	8	Unmodified	_RLTRVPTG_					0	0	0			REV__nc|ENSG00000182541|P53671-2|LIMK2	REV__nc|ENSG00000182541|P53671-2|LIMK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2743225097656	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.88185	1	9723	9723		32.812	0.85756	1	47650000	+		49343	22531	33129	33142	55731	55731					0.08152313228515595
RLTRVPTG	8	Unmodified	_RLTRVPTG_					0	0	0			REV__nc|ENSG00000182541|P53671-2|LIMK2	REV__nc|ENSG00000182541|P53671-2|LIMK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.274169921875	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.86677	2	9868	9868;9892		27.882	2.4321	1	51820000	+		49344	22531	33129	33142	55732;55733	55732					0.08152313228515595
RLTRVPTG	8	Unmodified	_RLTRVPTG_					0	0	0			REV__nc|ENSG00000182541|P53671-2|LIMK2	REV__nc|ENSG00000182541|P53671-2|LIMK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2742919921875	2	450.274701	898.534849	-1.2506	-0.00056311	0.52833	0.00023789	-0.72226	-0.00032522	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.86677	1	9388	9388		27.882	2.4321	1	44812000	+		49345	22531	33129	33142	55734	55734					0.08152313228515595
RLTRVPTG	8	Unmodified	_RLTRVPTG_					0	0	0			REV__nc|ENSG00000182541|P53671-2|LIMK2	REV__nc|ENSG00000182541|P53671-2|LIMK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2745361328125	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.89043	1	9517	9517		35.618	0	1	41438000	+		49346	22531	33129	33142	55735	55735					0.08152313228515595
RLTRVPTG	8	Unmodified	_RLTRVPTG_					0	0	0			REV__nc|ENSG00000182541|P53671-2|LIMK2	REV__nc|ENSG00000182541|P53671-2|LIMK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2742614746094	2	450.274701	898.534849	-1.7763	-0.00079984	1.0964	0.00049366	-0.67999	-0.00030618	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.87479	1	9357	9357		30.504	0	1	35178000	+		49347	22531	33129	33142	55736	55736					0.08152313228515595
RLTSEQLNV	9	Unmodified	_RLTSEQLNV_					0	0	0			REV__ENSG00000196584|ENST00000359321|XRCC2	REV__ENSG00000196584|ENST00000359321|XRCC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2921142578125	2	530.293288	1058.57202	0.74166	0.0003933	-0.55232	-0.00029289	0.18935	0.00010041	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.77696	1	9293	9293		31.53	1.2121	1	2081200	+		49348	23149	33130	33143	55737	55737					0.04507939983614051
RLTSGYLQ	8	Unmodified	_RLTSGYLQ_					0	0	0		ENST00000300584.7_1_15:78290174-78290387:-|nuORF	ENST00000300584.7_1_15:78290174-78290387:-|nuORF	ENST00000300584.7_1_15:78290174-78290387:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	469.2598876953125	2	469.258717	936.50288	-0.21471	-0.00010075	0.56692	0.00026603	0.35221	0.00016528	469.258843652114	25.622	0.74992	25.589	25.307	26.057	-0.032125					48	23	3	0	0	0	0.89962	1	1051	1051		38.806	8.3025	1	142410			49349	9795	33131	33144	55738	55738					0.0320890075471425
RLTSLVPFV	9	Unmodified	_RLTSLVPFV_					0	0	0		ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A;ENST00000462527.2_1_10:120819077-120819266:-|nuORF	ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3142700195312	2	516.316035	1030.61752	-0.68072	-0.00035146	-3.5737	-0.0018451	-4.2544	-0.0021966	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.78058	2	10157	10157;10239		30.504	0	1	39641000			49350	2352	33132	33145	55739;55740	55739					0.10343210236646883
RLTSLVPFV	9	Unmodified	_RLTSLVPFV_					0	0	0		ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A;ENST00000462527.2_1_10:120819077-120819266:-|nuORF	ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.31396484375	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.7724	-0.0014314	-4.3342	-0.0022378	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.76255	2	10237	10237;10321		35.618	5.1146	1	66055000			49351	2352	33132	33145	55741;55742	55741					0.10343210236646883
RLTSLVRRATL	11	Unmodified	_RLTSLVRRATL_					0	0	0		ENSG00000128656|ENST00000409900|CHN1	ENSG00000128656|ENST00000409900|CHN1	ENSG00000128656|ENST00000409900|CHN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4058227539062	2	643.406778	1284.799	1.7782	0.0011441	-3.0269	-0.0019475	-1.2486	-0.00080338	643.4046886151041	105.77	1.7293	105.8	105.04	106.77	0.038322					167	40	5	0	0	0	0.61369	2	11520	11520;11655		42.864	0.98393	1	14066000			49352	3559	33133	33146	55743;55744	55743					0.16799523262420735
RLTSLVRRATL	11	Unmodified	_RLTSLVRRATL_					0	0	0		ENSG00000128656|ENST00000409900|CHN1	ENSG00000128656|ENST00000409900|CHN1	ENSG00000128656|ENST00000409900|CHN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4055786132812	2	643.406778	1284.799	0.94326	0.0006069	-2.5215	-0.0016224	-1.5783	-0.0010155	643.4049918963857	105.64	1.1738	105.75	104.98	106.16	0.10766					144	29	6	0	0	0	0.60058	1	11192	11192		44.377	5.1244	1	23114000			49353	3559	33133	33146	55745	55745					0.16799523262420735
RLTSLVRRATL	11	Unmodified	_RLTSLVRRATL_					0	0	0		ENSG00000128656|ENST00000409900|CHN1	ENSG00000128656|ENST00000409900|CHN1	ENSG00000128656|ENST00000409900|CHN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4060668945312	2	643.406778	1284.799	0.94326	0.0006069	-1.4069	-0.0009052	-0.46364	-0.00029831	643.4057417471539	106.19	1.8486	106.29	106.11	107.96	0.099007					180	44	5	0	0	0	0.60058	2	11467	11467;11514		44.377	5.1244	1	16037000			49354	3559	33133	33146	55746;55747	55746					0.16799523262420735
RLTSRGLP	8	Unmodified	_RLTSRGLP_					0	0	0		ENSG00000174348|ENST00000312553|PODN;nc|ENSG00000174348|Q7Z5L7-2|PODN;nc|ENSG00000174348|Q7Z5L7-3|PODN	ENSG00000174348|ENST00000312553|PODN	ENSG00000174348|ENST00000312553|PODN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2744445800781	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.87064	1	9784	9784		29.15	0	1	47650000			49355	6926	33134	33147	55748	55748					0.08152313228526964
RLTSRLISQ	9	Unmodified	_RLTSRLISQ_					0	0	0			REV__ENSG00000153207|ENST00000648844|AHCTF1	REV__ENSG00000153207|ENST00000648844|AHCTF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.3240356445312	2	537.324922	1072.63529	-0.15828	-8.505E-05	-0.1231	-6.6143E-05	-0.28138	-0.00015119	537.3248040827777	17.247	0.41158	16.636	16.475	16.886	-0.6107					15	8	2	0	0	0	0.17181	1	238	238		79.713	6.8333	1	618680	+		49356	20337	33135	33148	55749	55749					0.10187925491527494
RLTSRLISQ	9	Unmodified	_RLTSRLISQ_					0	0	0			REV__ENSG00000153207|ENST00000648844|AHCTF1	REV__ENSG00000153207|ENST00000648844|AHCTF1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	537.324922	1072.63529	-0.15828	-8.505E-05	-0.1231	-6.6143E-05	-0.28138	-0.00015119	537.3248040827777	17.247	0.41158	16.636	16.475	16.886	-0.6107	-0.052459	3.1846E-05	NaN	79.713	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	618680	+		49357	20337	33135	33148							0.10187925491527494
RLTSRLQRM	9	Unmodified	_RLTSRLQRM_					0	0	0			REV__nc|ENSG00000103152|P29372-5|MPG	REV__nc|ENSG00000103152|P29372-5|MPG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.8400268554688	2	580.837674	1159.66079	0.60129	0.00034925	4.2756	0.0024834	4.8769	0.0028327	580.839949137506	69.631	0.83281	69.76	69.457	70.29	0.1291					104	40	3	0	0	0	0.77244	1	6316	6316		32.812	1.2826	1	14222000	+		49358	17392	33136	33149	55750	55750					0.0873507674227767
RLTTRSKSTA	10	Unmodified	_RLTTRSKSTA_					0	0	0		ENST00000307145.3_2_15:31619213-31619579:+|nuORF	ENST00000307145.3_2_15:31619213-31619579:+|nuORF	ENST00000307145.3_2_15:31619213-31619579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8257446289062	2	560.825286	1119.63602	-0.34947	-0.00019599	1.7324	0.0009716	1.383	0.00077561	560.8260618873793	51.029	0.61336	51.005	50.792	51.405	-0.02343					42	18	3	0	0	0	0.86348	1	4459	4459		31.53	2.3598	1	494230			49359	9867	33137	33150	55751	55751					0.08098720140560545
RLTVAFLVSFV	11	Unmodified	_RLTVAFLVSFV_					0	0	0			REV__ENST00000589695.1_1_6:41243865-41248907:-|nuORF	REV__ENST00000589695.1_1_6:41243865-41248907:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3797607421875	2	626.376623	1250.73869	1.374	0.00086065	2.4244	0.0015186	3.7984	0.0023793	626.3778876948486	107.84	0.75342	107.98	107.32	108.07	0.13867					64	18	4	0	0	0	0.68532	1	11547	11547		33.922	0	1	27248000	+		49360	18607	33138	33151	55752	55752					0.123354128793153
RLTVPIVPLL	10	Unmodified	_RLTVPIVPLL_					0	0	0			REV__ENSG00000114650|ENST00000265565|SCAP;REV__nc|ENSG00000114650|Q12770-2|SCAP	REV__ENSG00000114650|ENST00000265565|SCAP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3401489257812	2	560.876259	1119.73797	0.86181	0.00048337	0.95321	0.00053463	1.815	0.001018	560.8769480881962	102.07	0.4076	102.2	101.89	102.3	0.13523					10	9	2	0	0	0	0.37624	1	10738	10738		10.265	0	1	210290	+		49361	18058;29792	33139	33152	55753	55753					0.1828861823025818
RLTVYGNPL	9	Unmodified	_RLTVYGNPL_					0	0	0			REV__nc|ENSG00000138639|Q8N264-3|ARHGAP24	REV__nc|ENSG00000138639|Q8N264-3|ARHGAP24	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7938232421875	2	516.795466	1031.57638	-0.83709	-0.0004326	-3.0347	-0.0015683	-3.8718	-0.0020009	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.77244	1	8606	8606		32.812	0.85756	1	490270	+		49362	19484	33140	33153	55754	55754					0.06185449197187154
RLTYPRAVVF	10	Unmodified	_RLTYPRAVVF_					0	0	0		ENSG00000130714|ENST00000402686|POMT1;nc|ENSG00000130714|Q9Y6A1|POMT1	ENSG00000130714|ENST00000402686|POMT1	ENSG00000130714|ENST00000402686|POMT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.35302734375	2	611.358765	1220.70298	-0.40517	-0.00024771	-4.2108	-0.0025743	-4.6159	-0.002822	611.3560030849253	94.249	2.8974	94.318	92.412	95.31	0.069603					251	68	4	0	0	0	0.82886	1	9849	9849		37.812	4.9991	1	5373200			49363	3670	33141	33154	55755	55755					0.10145375422303005
RLTYPRAVVF	10	Unmodified	_RLTYPRAVVF_					0	0	0		ENSG00000130714|ENST00000402686|POMT1;nc|ENSG00000130714|Q9Y6A1|POMT1	ENSG00000130714|ENST00000402686|POMT1	ENSG00000130714|ENST00000402686|POMT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3555297851562	2	611.358765	1220.70298	0.21646	0.00013233	-4.1006	-0.0025069	-3.8841	-0.0023746	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.86218	1	10204	10204		32.812	1.2826	1	12399000			49364	3670	33141	33154	55756	55756					0.10145375422303005
RLTYPRAVVF	10	Unmodified	_RLTYPRAVVF_					0	0	0		ENSG00000130714|ENST00000402686|POMT1;nc|ENSG00000130714|Q9Y6A1|POMT1	ENSG00000130714|ENST00000402686|POMT1	ENSG00000130714|ENST00000402686|POMT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3540649414062	2	611.358765	1220.70298	-1.2523	-0.00076561	-3.3028	-0.0020192	-4.5551	-0.0027848	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.80179	1	9556	9556		39.253	2.8061	1	5978100			49365	3670	33141	33154	55757	55757					0.10145375422303005
RLVASAEQLL	10	Unmodified	_RLVASAEQLL_					0	0	0		ENST00000526250.5_1_11:66259118-66263112:+|nuORF;nc|ENSG00000254986|Q9NY33-4|DPP3;ENSG00000254986|ENST00000531863|DPP3	ENST00000526250.5_1_11:66259118-66263112:+|nuORF	ENST00000526250.5_1_11:66259118-66263112:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.3270263671875	2	550.327131	1098.63971	3.1879	0.0017544	-3.0241	-0.0016642	0.16384	9.0164E-05	550.325464553472	100.2	1.1012	100.15	99.651	100.75	-0.052353					65	24	3	0	0	0	0.86471	1	10859	10859		30.318	3.5216	1	374270			49366	8881	33142	33155	55758	55758					0.09433389914420331
RLVDNRTIL	9	Unmodified	_RLVDNRTIL_					0	0	0		ENST00000480370.1_1_2:70515195-70515252:-|nuORF	ENST00000480370.1_1_2:70515195-70515252:-|nuORF	ENST00000480370.1_1_2:70515195-70515252:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3357543945312	2	550.332747	1098.65094	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.07	1	117.98	117.48	118.48	-0.088509								0	0	0	0.30053	1	12721	12721		30.504	0	1				49367	12432	33143	33156	55759	55759					0.10556212008555121
RLVFLDHVIP	10	Unmodified	_RLVFLDHVIP_					0	0	0			REV__ENST00000510626.5_1_4:3131970-3189635:+|nuORF	REV__ENST00000510626.5_1_4:3131970-3189635:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5748596191406	3	403.576519	1207.70773	-1.8261	-0.00073697	-2.4452	-0.00098683	-4.2713	-0.0017238	403.5754952513638	81.706	0.84529	81.851	81.446	82.291	0.14513					69	19	4	0	0	0	0.71042	1	7827	7827		32.751	0	1	2366000	+		49368	27956	33144	33157	55760	55760					0.11218259565066546
RLVFLDHVIP	10	Unmodified	_RLVFLDHVIP_					0	0	0			REV__ENST00000510626.5_1_4:3131970-3189635:+|nuORF	REV__ENST00000510626.5_1_4:3131970-3189635:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5745544433594	3	403.576519	1207.70773	-0.18431	-7.4383E-05	-4.1628	-0.00168	-4.3471	-0.0017544	403.57480385646164	80.099	0.84451	80.626	80.105	80.949	0.52676					63	19	4	0	0	0	0.71042	1	9239	9239		32.751	0	1	4093300	+		49369	27956	33144	33157	55761	55761					0.11218259565066546
RLVFRAGACY	10	Unmodified	_RLVFRAGACY_					0	0	0			REV__ENST00000439308.6_1_22:50683173-50683230:-|nuORF	REV__ENST00000439308.6_1_22:50683173-50683230:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3065185546875	2	578.308218	1154.60188	-0.8638	-0.00049954	-3.6943	-0.0021364	-4.5581	-0.002636	578.305931030003	52.909	0.73541	52.905	52.58	53.316	-0.0032997					43	21	3	0	0	0	0.81018	1	4590	4590		38.806	1.647	1	307760	+		49370	26729	33145	33158	55762	55762					0.030766004479573894
RLVGALLK	8	Unmodified	_RLVGALLK_					0	0	0			REV__ENSG00000130349|ENST00000311381|MTRES1	REV__ENSG00000130349|ENST00000311381|MTRES1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3000793457031	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.80706	1	6704	6704		19.36	0	1	1072400	+		49371	18870	33146	33159	55763	55763					0.14627262273370434
RLVGPVHLTR	10	Unmodified	_RLVGPVHLTR_					0	0	0		ENST00000522335.5_1_8:144462155-144464818:+|nuORF;ENSG00000158106|ENST00000289013|RHPN1	ENST00000522335.5_1_8:144462155-144464818:+|nuORF	ENST00000522335.5_1_8:144462155-144464818:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3564453125	2	574.356557	1146.69856	2.697	0.001549	-3.8251	-0.002197	-1.1282	-0.00064797	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.86218	1	10834	10834		32.812	2.4947	1	738540			49372	5461	33147	33160	55764	55764					0.1310791099938342
RLVHSNDG	8	Unmodified	_RLVHSNDG_					0	0	0		ENST00000493335.5_1_22:31492537-31494796:+|nuORF;ENST00000489337.5_1_22:31484532-31494796:+|nuORF;ENST00000460658.5_1_22:31492537-31495228:+|nuORF;nc|ENSG00000183963|P53814-2|SMTN;ENSG00000183963|ENST00000333137|SMTN;nc|ENSG00000183963|P53814|SMTN;nc|ENSG00000183963|P53814-6|SMTN	ENST00000493335.5_1_22:31492537-31494796:+|nuORF	ENST00000493335.5_1_22:31492537-31494796:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2327575683594	2	449.230491	896.446428	-1.619	-0.00072729	1.9511	0.00087651	0.33216	0.00014922	449.23133844286133	83.319	3.7519	83.457	82.118	85.87	0.13811					166	86	3	0	0	0	0.88185	1	7964	7964		32.812	6.1195	1	160270			49373	12649	33148	33161	55765	55765					-0.0059372708195724044
RLVILTDPLP	10	Unmodified	_RLVILTDPLP_					0	0	0			REV__ENST00000489173.1_1_3:52325707-52327139:+|nuORF	REV__ENST00000489173.1_1_3:52325707-52327139:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8536987304688	2	568.855524	1135.69649	-0.35573	-0.00020236	-3.0084	-0.0017113	-3.3641	-0.0019137	568.8537210066357	105.99	1.5144	105.99	105.37	106.89	0					65	34	2	0	0	0	0.86718	1	11021	11021		27.882	4.3595	1	402380	+		49374	27615	33149	33162	55766	55766					0.1340743747093711
RLVILTDPLP	10	Unmodified	_RLVILTDPLP_					0	0	0			REV__ENST00000489173.1_1_3:52325707-52327139:+|nuORF	REV__ENST00000489173.1_1_3:52325707-52327139:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8544921875	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.85934	1	11153	11153		35.618	4.0885	1	50786000	+		49375	27615	33149	33162	55767	55767					0.1340743747093711
RLVIRKLRAT	10	Unmodified	_RLVIRKLRAT_					0	0	0		ENSG00000183340|ENST00000332349|JRKL	ENSG00000183340|ENST00000332349|JRKL	ENSG00000183340|ENST00000332349|JRKL	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	409.2785339355469	3	409.278696	1224.81426	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.468	1	18.389	17.889	18.889	-0.078943								0	0	0	0.45132	1	325	325		10.587	0.4829	1				49376	7524	33150	33163	55768	55768					0.2108443485024054
RLVISYEP	8	Unmodified	_RLVISYEP_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	488.77606201171875	2	488.776742	975.538931	-1.6312	-0.0007973	1.8407	0.00089967	0.20944	0.00010237	488.7775472681233	80.365	0.64294	80.421	80.133	80.776	0.055916					26	17	2	0	0	0	0.86288	1	7958	7958		26.796	1.3459	1	143550			49377	8945	33151	33164	55769	55769					0.050183579315557836
RLVISYEP	8	Unmodified	_RLVISYEP_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	488.776742	975.538931	-0.08446	-4.1282E-05	-0.0079718	-3.8964E-06	-0.092432	-4.5178E-05	488.77667950614386	80.52	0.6187	80.582	80.259	80.877	0.062225	0.1597	-0.0004854	NaN	26.796	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90931			49378	8945	33151	33164							0.050183579315557836
RLVISYEP	8	Unmodified	_RLVISYEP_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	488.776742	975.538931	-0.70227	-0.00034326	1.3795	0.00067427	0.67724	0.00033102	488.7772667301227	80.321	0.63557	80.458	80.201	80.837	0.13702	0.036283	0.00087094	NaN	26.796	34	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102770			49379	8945	33151	33164							0.050183579315557836
RLVISYEP	8	Unmodified	_RLVISYEP_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	488.776742	975.538931	0.60664	0.00029651	-0.37678	-0.00018416	0.22986	0.00011235	488.7764880692043	80.199	0.52494	80.34	80.125	80.65	0.14118	-0.082401	-0.00084594	NaN	26.796	29	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88000			49380	8945	33151	33164							0.050183579315557836
RLVISYEP	8	Unmodified	_RLVISYEP_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	488.776742	975.538931	-1.3811	-0.00067506	1.667	0.00081478	0.28585	0.00013972	488.777303105621	80.269	0.48584	80.375	80.223	80.709	0.10527	-0.047519	0.0011519	NaN	26.796	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89830			49381	8945	33151	33164							0.050183579315557836
RLVISYEP	8	Unmodified	_RLVISYEP_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	488.776742	975.538931	-0.41802	-0.00020432	0.34773	0.00016996	-0.070298	-3.436E-05	488.7768832088902	79.974	0.59187	80.39	80.082	80.674	0.41621	-0.032238	-0.00013769	NaN	26.796	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	372410			49382	8945	33151	33164							0.050183579315557836
RLVISYEP	8	Unmodified	_RLVISYEP_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	488.776742	975.538931	-0.15016	-7.3394E-05	-0.024616	-1.2032E-05	-0.17477	-8.5426E-05	488.77670810448177	79.865	0.63281	80.414	80.085	80.718	0.54945	-0.0076828	-0.00050167	NaN	26.796	26	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	323000			49383	8945	33151	33164							0.050183579315557836
RLVKAVLP	8	Unmodified	_RLVKAVLP_					0	0	0		ENSG00000080511|ENST00000591589|RDH8	ENSG00000080511|ENST00000591589|RDH8	ENSG00000080511|ENST00000591589|RDH8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2870788574219	2	448.308013	894.601472	0.21123	9.4696E-05	-3.0187	-0.0013533	-2.8075	-0.0012586	448.3065467828119	19.262	0.67815	18.632	18.444	19.122	-0.6296					23	14	2	0	0	0	0.4196	1	480	480		29.842	16.066	1	83939			49384	1443	33152	33165	55770	55770					0.1499554879039806
RLVKAVLP	8	Unmodified	_RLVKAVLP_					0	0	0		ENSG00000080511|ENST00000591589|RDH8	ENSG00000080511|ENST00000591589|RDH8	ENSG00000080511|ENST00000591589|RDH8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	448.308013	894.601472	-0.022396	-1.004E-05	-2.7089	-0.0012144	-2.7313	-0.0012245	448.3067134901572	19.11	0.29557	18.641	18.495	18.79	-0.46967	0.0044099	0.00016658	NaN	29.842	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43785			49385	1443	33152	33165							0.1499554879039806
RLVKENLID	9	Unmodified	_RLVKENLID_					0	0	0		nc|ENSG00000186283|Q9H497-3|TOR3A;ENSG00000186283|ENST00000367627|TOR3A	nc|ENSG00000186283|Q9H497-3|TOR3A	nc|ENSG00000186283|Q9H497-3|TOR3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.3270263671875	2	550.327131	1098.63971	1.2755	0.00070194	-1.1938	-0.00065698	0.081698	4.4961E-05	550.3264981095151	100.02	1.2719	100.07	99.504	100.78	0.047523					72	28	3	0	0	0	0.7932	1	10735	10735		24.519	0.99649	1	456100			49386	7790	33153	33166	55771	55771					0.09433389914420331
RLVKGLLA	8	Unmodified	_RLVKGLLA_					0	0	0			REV__nc|ENSG00000182218|Q96JK4-2|HHIPL1	REV__nc|ENSG00000182218|Q96JK4-2|HHIPL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30035400390625	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.82464	1	8077	8077		21.702	6.0661	1	6323600	+		49387	22510	33154	33167	55772	55772					0.14627262273370434
RLVLAHLAR	9	Unmodified	_RLVLAHLAR_					0	0	0		ENSG00000160883|ENST00000292432|HK3	ENSG00000160883|ENST00000292432|HK3	ENSG00000160883|ENST00000292432|HK3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.361572265625	2	524.840542	1047.66653	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.45	1	115.45	114.95	115.95	0								0	0	0	0.36148	1	11872	11872		11.511	0	1				49388	5613	33155	33168	55773	55773					0.1446054331624964
RLVLEFIFTK	10	Unmodified	_RLVLEFIFTK_					0	0	0		ENST00000502774.1_1_4:154579740-154580577:+|nuORF	ENST00000502774.1_1_4:154579740-154580577:+|nuORF	ENST00000502774.1_1_4:154579740-154580577:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5924987792969	3	422.592058	1264.75434	-0.62548	-0.00026432	3.0702	0.0012974	2.4447	0.0010331	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.86621	1	4988	4988		26.063	8.2302	1	1069500			49389	12863	33156	33169	55774	55774					0.1325569939633624
RLVLGGTWVC	10	Unmodified	_RLVLGGTWVC_					0	0	0			REV__ENST00000494295.1_1_X:134477789-134477951:-|nuORF	REV__ENST00000494295.1_1_X:134477789-134477951:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3065185546875	2	552.305144	1102.59573	0.26261	0.00014504	2.0839	0.0011509	2.3465	0.001296	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.86718	1	9264	9264		27.882	2.3082	1	1950800	+		49390	27715	33157	33170	55775	55775					0.04854082216434108
RLVLGVLL	8	Unmodified	_RLVLGVLL_					0	0	0			REV__nc|ENSG00000198689|Q92581-3|SLC9A6	REV__nc|ENSG00000198689|Q92581-3|SLC9A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.8072814941406	2	441.810388	881.606223	0.23762	0.00010498	-3.2652	-0.0014426	-3.0275	-0.0013376	441.80895009460005	19.294	0.77876	18.824	18.524	19.303	-0.46967					22	16	2	0	0	0	0.81548	1	520	520		20.482	0	1	136750	+		49391	23355	33158	33171	55776	55776					0.16068432933172971
RLVLVLLWLE	10	Unmodified	_RLVLVLLWLE_					0	0	0			REV__ENSG00000161381|ENST00000315392|PLXDC1	REV__ENSG00000161381|ENST00000315392|PLXDC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.94024658203125	3	418.604186	1252.79073	-1.7442	-0.00073012	3.1032	0.001299	1.359	0.00056889	418.60537062211796	49.043	4.3192	49.043	47.911	52.23	0					175	108	3	0	0	0	0.85441	1	3840	3840		20.837	3.004	1	101990	+		49392	20764	33159	33172	55777	55777					0.17444576293087266
RLVNLPTSSL	10	Unmodified	_RLVNLPTSSL_					0	0	0		ENST00000509376.5_1_4:52779756-52779993:+|nuORF	ENST00000509376.5_1_4:52779756-52779993:+|nuORF	ENST00000509376.5_1_4:52779756-52779993:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.3275146484375	2	550.327131	1098.63971	1.2755	0.00070194	-1.1938	-0.00065698	0.081698	4.4961E-05	550.3264981095151	100.02	1.2719	100.07	99.504	100.78	0.047523					72	28	3	0	0	0	0.80179	1	10783	10783		39.253	1.4413	1	456100			49393	12988	33160	33173	55778	55778					0.09433389914420331
RLVPGQHPKL	10	Unmodified	_RLVPGQHPKL_					0	0	0			REV__nc|ENSG00000109118|Q96QT6-4|PHF12	REV__nc|ENSG00000109118|Q96QT6-4|PHF12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.8500366210938	2	572.851107	1143.68766	1.0371	0.00059409	-4.1675	-0.0023874	-3.1304	-0.0017933	572.8485650257212	17.146	0.38702	17.064	16.857	17.244	-0.0821					28	15	3	0	0	0	0.86718	1	221	221		27.882	4.8398	1	130280	+		49394	17749	33161	33174	55779	55779					0.12156508625139395
RLVPPEKPVY	10	Unmodified	_RLVPPEKPVY_					0	0	0			REV__ENSG00000196547|ENST00000559717|MAN2A2	REV__ENSG00000196547|ENST00000559717|MAN2A2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.3796997070312	2	599.353148	1196.69174	-1.2916	-0.00077415	0.40513	0.00024281	-0.88652	-0.00053134	599.3537100444794	103.44	0.19016	103.55	103.46	103.65	0.11494					6	4	2	0	0	0	0.37624	1	10865	10865		35.618	8.571	1	186700	+		49395	23143	33162	33175	55780	55780					0.10126553328177579
RLVRFQLKKLY	11	Unmodified	_RLVRFQLKKLY_					0	0	0		ENST00000334268.8_1_6:123658775-123687324:-|nuORF	ENST00000334268.8_1_6:123658775-123687324:-|nuORF	ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7689208984375	3	488.645156	1462.91364	0.14841	7.252E-05	2.4902	0.0012168	2.6386	0.0012893	488.9807502024176	17.477	0.26682	16.867	16.706	16.972	-0.6107					8	5	2	0	0	0	0.18238	1	265	265		9.2118	3.2108	1	51632			49396	10147	33163	33176	55781	55781					0.20069832744366067
RLVRNARRLRR	11	Unmodified	_RLVRNARRLRR_					0	0	0			REV__nc|ENSG00000102001|O60840-4|CACNA1F	REV__nc|ENSG00000102001|O60840-4|CACNA1F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.3124084472656	3	489.318548	1464.93381	-0.80294	-0.0003929	0.43971	0.00021516	-0.36323	-0.00017774	489.31869096859845	16.472	0.55229	16.519	16.376	16.929	0.047802					62	24	4	0	0	0	0.81219	1	172	172		8.7993	2.4784	1	902930	+		49397	17316	33164	33177	55782	55782					0.21994441247511531
RLVRSARA	8	Unmodified	_RLVRSARA_					0	0	0			REV__nc|nan|Q7Z7L8|C11orf96	REV__nc|nan|Q7Z7L8|C11orf96	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.79290771484375	2	464.793592	927.572632	-1.8726	-0.00087039	-4.4289	-0.0020585	-6.3015	-0.0029289	464.79142205700754	36.889	1.6787	36.889	35.761	37.439	0					76	39	3	0	0	0	0.81897	1	2118	2118		20.947	4.4738	1	196040	+		49398	30326	33165	33178	55783	55783					0.10594824213978882
RLVRVFILL	9	Unmodified	_RLVRVFILL_					0	0	0			REV__ENST00000491016.1_1_22:29706398-29706989:+|nuORF	REV__ENST00000491016.1_1_22:29706398-29706989:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.841552734375	2	564.884419	1127.75428	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.12	1	116.08	115.58	116.58	-0.037872								0	0	0	0.36143	1	13940	13940		3.9852	0	1		+		49399	22762	33166	33179	55784	55784					0.19551744187037912
RLVRWWRVHRR	11	Unmodified	_RLVRWWRVHRR_					0	0	0			REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.6559448242188	3	540.658793	1618.95455	1.2466	0.00067399	-4.1969	-0.0022691	-2.9502	-0.0015951	540.6561844313776	106.78	1.7575	106.82	106.07	107.82	0.03688					73	31	3	0	0	0	0.93617	2	11708	11708;11721		0.31226	0.31226	1	610530	+		49400	28493	33167	33180	55785;55786	55785					0.16983031627160017
RLVRWWRVHRR	11	Unmodified	_RLVRWWRVHRR_					0	0	0			REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.322509765625	3	540.658793	1618.95455	1.4534	0.0007858	-4.26	-0.0023032	-2.8066	-0.0015174	540.9906622835479	106.83	0.89928	106.93	106.59	107.49	0.10396					68	32	3	0	0	0	0.91937	1	13003	13003		1.4188	1.4188	1	194260	+		49401	28493	33167	33180	55787	55787					0.16983031627160017
RLVRWWRVHRR	11	Unmodified	_RLVRWWRVHRR_					0	0	0			REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	540.658793	1618.95455	-0.21613	-0.00011685	-2.7416	-0.0014823	-2.9577	-0.0015991	540.6570338123256	107.05	1.4023	107.02	106.38	107.79	-0.034401	0.059838	0.0024497	NaN	1.4188	71	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	592170	+		49402	28493	33167	33180							0.16983031627160017
RLVRWWRVHRR	11	Unmodified	_RLVRWWRVHRR_					0	0	0			REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	540.658793	1618.95455	3.6261	0.0019605	-6.8691	-0.0037138	-3.243	-0.0017533	540.6548353927262	106.96	1.3635	106.92	106.4	107.77	-0.034134	-0.035427	-0.004245	NaN	1.4188	76	28	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	647440	+		49403	28493	33167	33180							0.16983031627160017
RLVRWWRVHRR	11	Unmodified	_RLVRWWRVHRR_					0	0	0			REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	540.658793	1618.95455	1.2466	0.00067399	-4.1969	-0.0022691	-2.9502	-0.0015951	540.6561844313776	106.78	1.7575	106.82	106.07	107.82	0.03688	-0.13573	8.9296E-05	NaN	1.4188	73	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	610530	+		49404	28493	33167	33180							0.16983031627160017
RLVRWWRVHRR	11	Unmodified	_RLVRWWRVHRR_					0	0	0			REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	540.658793	1618.95455	0.10513	5.6839E-05	-3.3278	-0.0017992	-3.2226	-0.0017424	540.9911501938982	106.74	0.5544	106.89	106.47	107.03	0.14843	-0.066479	0.0014989	NaN	1.4188	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149880	+		49405	28493	33167	33180							0.16983031627160017
RLVRWWRVHRR	11	Unmodified	_RLVRWWRVHRR_					0	0	0			REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	REV__ENST00000542104.5_2_12:65089076-65089520:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	540.658793	1618.95455	-1.4826	-0.0008016	-1.9069	-0.001031	-3.3896	-0.0018326	540.6576606367722	106.87	0.78572	106.92	106.6	107.39	0.053749	-0.033572	0.0038035	NaN	1.4188	21	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86237	+		49406	28493	33167	33180							0.16983031627160017
RLVSLIVLLN	10	Unmodified	_RLVSLIVLLN_					0	0	0			REV__ENSG00000134640|ENST00000257068|MTNR1B	REV__ENSG00000134640|ENST00000257068|MTNR1B	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.3817749023438	2	570.379166	1138.74378	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.245	1	15.294	14.794	15.794	0.04908								0	0	0	0.45132	1	25	25		24.519	3.5723	1		+		49407	19153	33168	33181	55788	55788					0.17995716741961587
RLVVVVVV	8	Unmodified	_RLVVVVVV_					0	0	0		nc|ENSG00000186810|P49682-2|CXCR3;ENSG00000186810|ENST00000373693|CXCR3	nc|ENSG00000186810|P49682-2|CXCR3	nc|ENSG00000186810|P49682-2|CXCR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.80865478515625	2	441.810388	881.606223	0.23762	0.00010498	-3.2652	-0.0014426	-3.0275	-0.0013376	441.80895009460005	19.294	0.77876	18.824	18.524	19.303	-0.46967					22	16	2	0	0	0	0.81724	1	495	495		14.664	0	1	136750			49408	7821	33169	33182	55789	55789					0.1606843293318434
RLVYSGHL	8	Unmodified	_RLVYSGHL_					0	0	0			REV__nc|ENSG00000115325|Q99704-3|DOK1	REV__nc|ENSG00000115325|Q99704-3|DOK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7673645019531	2	472.769252	943.52395	-1.1355	-0.00053681	-3.1204	-0.0014752	-4.2559	-0.002012	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.884	1	7881	7881		33.516	1.5607	1	292450	+		49409	18110	33170	33183	55790	55790					0.04992910854230104
RLVYSGHL	8	Unmodified	_RLVYSGHL_					0	0	0			REV__nc|ENSG00000115325|Q99704-3|DOK1	REV__nc|ENSG00000115325|Q99704-3|DOK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7672424316406	2	472.769252	943.52395	-0.41041	-0.00019403	-3.7134	-0.0017556	-4.1238	-0.0019496	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.87479	1	8509	8509		30.504	3.7075	1	590200	+		49410	18110	33170	33183	55791	55791					0.04992910854230104
RLWMRSLWWLK	11	Unmodified	_RLWMRSLWWLK_					0	0	0			REV__ENST00000216218.7_1_22:41222585-41223167:-|nuORF	REV__ENST00000216218.7_1_22:41222585-41223167:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	525.9620361328125	3	525.630741	1573.87039	-1.7853	-0.00093843	-1.4465	-0.00076033	-3.2319	-0.0016988	525.630099752315	19.204	0.44818	19.204	19.016	19.464	0					29	14	3	0	0	0	0.85439	1	402	402		5.6988	0.28586	1	70348	+		49411	24127	33171	33184	55792	55792					0.10641319695400853
RLWPRPHA	8	Unmodified	_RLWPRPHA_					0	0	0			REV__ENSG00000135925|ENST00000258411|WNT10A	REV__ENSG00000135925|ENST00000258411|WNT10A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.79296875	2	516.796135	1031.57772	-1.1229	-0.00058032	-4.2403	-0.0021914	-5.3633	-0.0027717	516.7939356050468	88.475	2.4458	88.946	87.694	90.139	0.47068					178	59	4	0	0	0	0.90465	1	10351	10351		40.573	4.1259	1	833210	+		49412	19271	33172	33185	55793	55793					0.06319128076597735
RLWRKNKSIRP	11	Unmodified	_RLWRKNKSIRP_					0	0	0		ENST00000495736.1_1_7:129986419-130007427:+|nuORF;nc|ENSG00000158525|Q8WXQ8-2|CPA5;nc|ENSG00000158525|Q8WXQ8-3|CPA5;chr7:130367571-130368410|28|89.54|0.14|9.3|+|ENST00000431780|CPA5,CPA5;ENSG00000158525|ENST00000474905|CPA5	ENST00000495736.1_1_7:129986419-130007427:+|nuORF	ENST00000495736.1_1_7:129986419-130007427:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.6375427246094	3	485.300271	1452.87898	-1.0424	-0.00050586	3.481	0.0016893	2.4386	0.0011835	485.3011113307685	16.711	0.54544	16.629	16.421	16.966	-0.0821					43	23	3	0	0	0	0.80813	1	157	157		9.6461	0.84683	1	173530			49413	490	33173	33186	55794	55794					0.17066009656241476
RLWTAPVLA	9	Unmodified	_RLWTAPVLA_					0	0	0			REV__ENST00000292385.9_1_5:176894615-176895140:-|nuORF	REV__ENST00000292385.9_1_5:176894615-176895140:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8090209960938	2	513.808377	1025.6022	0.034734	1.7846E-05	1.2224	0.00062807	1.2571	0.00064592	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.7932	1	4534	4534		21.96	1.9631	1	666950	+		49414	24676	33174	33187	55795	55795					0.09042343439477918
RLWTINIVPP	10	Unmodified	_RLWTINIVPP_					0	0	0			REV__ENST00000485901.1_1_6:32974995-32975826:-|nuORF	REV__ENST00000485901.1_1_6:32974995-32975826:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.57440185546875	3	403.576519	1207.70773	-1.7546	-0.00070812	-2.524	-0.0010186	-4.2787	-0.0017268	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.67608	1	7909	7909		33.922	3.3528	1	1090300	+		49415	23472	33175	33188	55796	55796					0.11218259565089284
RLWTINIVPP	10	Unmodified	_RLWTINIVPP_					0	0	0			REV__ENST00000485901.1_1_6:32974995-32975826:-|nuORF	REV__ENST00000485901.1_1_6:32974995-32975826:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8587036132812	2	604.861141	1207.70773	0.22273	0.00013472	-4.4611	-0.0026983	-4.2384	-0.0025636	604.8583327420461	82.105	1.1205	82.531	81.753	82.873	0.42645					96	27	4	0	0	0	0.8608	1	9525	9525		34.173	11.593	1	3330300	+		49416	23472	33175	33188	55797	55797					0.11218259565089284
RLWTINIVPP	10	Unmodified	_RLWTINIVPP_					0	0	0			REV__ENST00000485901.1_1_6:32974995-32975826:-|nuORF	REV__ENST00000485901.1_1_6:32974995-32975826:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8588256835938	2	604.861141	1207.70773	0.044967	2.7199E-05	-4.2198	-0.0025524	-4.1749	-0.0025252	604.8584867584212	80.792	1.0733	81.319	80.907	81.98	0.52676					69	21	4	0	0	0	0.77314	1	9340	9340		40.778	2.9666	1	4362400	+		49417	23472	33175	33188	55798	55798					0.11218259565089284
RLWTINIVPP	10	Unmodified	_RLWTINIVPP_					0	0	0			REV__ENST00000485901.1_1_6:32974995-32975826:-|nuORF	REV__ENST00000485901.1_1_6:32974995-32975826:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8583374023438	2	604.861141	1207.70773	0.082072	4.9642E-05	-4.3906	-0.0026557	-4.3085	-0.0026061	604.8584757159402	82.084	1.3276	82.558	81.718	83.045	0.47383					56	29	2	0	0	0	0.54701	1	9498	9498		52.937	10.072	1	3105600	+		49418	23472	33175	33188	55799	55799					0.11218259565089284
RLYFSQQTY	9	Unmodified	_RLYFSQQTY_					0	0	0		ENSG00000101986|ENST00000218104|ABCD1	ENSG00000101986|ENST00000218104|ABCD1	ENSG00000101986|ENST00000218104|ABCD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	603.802490234375	2	603.301113	1204.58767	0.64147	0.000387	-0.28244	-0.0001704	0.35903	0.0002166	603.3009670750008	51.299	0.66569	51.734	51.367	52.033	0.43505					30	15	4	0	0	0	0.3164	1	5097	5097		63.534	10.597	1	748630			49419	1978	33176	33189	55800	55800					-0.006437734993369304
RLYFSQQTY	9	Unmodified	_RLYFSQQTY_					0	0	0		ENSG00000101986|ENST00000218104|ABCD1	ENSG00000101986|ENST00000218104|ABCD1	ENSG00000101986|ENST00000218104|ABCD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.3018188476562	2	603.301113	1204.58767	0.80419	0.00048517	1.8937	0.0011425	2.6979	0.0016277	603.3031561194687	51.111	1.152	51.863	51.449	52.601	0.75174					37	27	3	0	0	0	0.3164	1	5087	5087		63.534	12.341	1	959410			49420	1978	33176	33189	55801	55801					-0.006437734993369304
RLYLIAHP	8	Unmodified	_RLYLIAHP_					0	0	0		ENST00000242848.8_2_13:46619177-46626639:-|nuORF	ENST00000242848.8_2_13:46619177-46626639:-|nuORF	ENST00000242848.8_2_13:46619177-46626639:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79534912109375	2	491.795269	981.575986	0.42504	0.00020903	0.32902	0.00016181	0.75406	0.00037084	491.7954861357076	59.345	2.1315	59.459	58.989	61.12	0.11396					113	74	3	0	0	0	0.82464	1	5094	5094		21.702	1.7056	1	139720			49421	9257	33177	33190	55802	55802					0.08446074267988024
RLYLIAHP	8	Unmodified	_RLYLIAHP_					0	0	0		ENST00000242848.8_2_13:46619177-46626639:-|nuORF	ENST00000242848.8_2_13:46619177-46626639:-|nuORF	ENST00000242848.8_2_13:46619177-46626639:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7945556640625	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.90024	1	4526	4526		39.021	7.0666	1	1898900			49422	9257	33177	33190	55803	55803					0.08446074267988024
RLYPTPFAR	9	Unmodified	_RLYPTPFAR_					0	0	0			REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	REV__nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8206176757812	2	560.816733	1119.61891	1.7672	0.00099109	3.7263	0.0020898	5.4936	0.0030809	560.818662901512	92.32	2.1996	92.766	91.879	94.079	0.44661					115	51	3	0	0	0	0.7932	1	11013	11013		26.693	1.1189	1	230230	+		49423	18722	33178	33191	55804	55804					0.06388844325419996
RLYPTSNPK	9	Unmodified	_RLYPTSNPK_					0	0	0		ENST00000568685.1_1_16:31191489-31193920:+|nuORF	ENST00000568685.1_1_16:31191489-31193920:+|nuORF	ENST00000568685.1_1_16:31191489-31193920:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.297607421875	2	538.298373	1074.58219	-0.15282	-8.2265E-05	-0.074032	-3.9851E-05	-0.22686	-0.00012212	538.2981908710656	26.032	0.83897	25.775	25.465	26.304	-0.2572					45	18	3	0	0	0	0.17181	1	1382	1382		79.713	13.283	1	449360			49424	13964	33179	33192	55805	55805					0.047885477088584594
RLYPTSNPK	9	Unmodified	_RLYPTSNPK_					0	0	0		ENST00000568685.1_1_16:31191489-31193920:+|nuORF	ENST00000568685.1_1_16:31191489-31193920:+|nuORF	ENST00000568685.1_1_16:31191489-31193920:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.2980346679688	2	538.298373	1074.58219	2.0126	0.0010834	-2.2294	-0.0012001	-0.21685	-0.00011673	538.29703109323	26.01	0.85884	25.579	25.191	26.05	-0.4311					45	19	4	0	0	0	0.24527	1	1401	1401		69.628	10.846	1	561100			49425	13964	33179	33192	55806	55806					0.047885477088584594
RMAKGVKEI	9	Unmodified	_RMAKGVKEI_					0	0	0		ENST00000462351.5_1_2:220154950-220159983:-|nuORF;nc|ENSG00000054356|Q16849-3|PTPRN;nc|ENSG00000054356|Q16849-2|PTPRN;ENSG00000054356|ENST00000295718|PTPRN	ENST00000462351.5_1_2:220154950-220159983:-|nuORF	ENST00000462351.5_1_2:220154950-220159983:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.304931640625	2	516.305144	1030.59573	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.61	1	62.577	62.077	63.077	-0.033714								0	0	0	0.30416	1	5922	5922		29.15	1.2673	1				49426	1019	33180	33193	55807	55807					0.08166082216439463
RMFNAENGK	9	Unmodified	_RMFNAENGK_					0	0	0		ENST00000532202.1_1_11:764437-764842:+|nuORF;ENST00000530666.1_1_11:764238-764842:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1;ENSG00000177156|ENST00000319006|TALDO1	ENST00000532202.1_1_11:764437-764842:+|nuORF	ENST00000532202.1_1_11:764437-764842:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.7586669921875	2	533.758558	1065.50256	0.81126	0.00043301	-0.64185	-0.00034259	0.16941	9.0423E-05	533.7579875992449	23.418	0.47182	22.843	22.664	23.136	-0.57415					23	10	3	0	0	0	0.18601	1	1045	1045		76.774	2.7994	1	226520			49427	7120	33181	33194	55808	55808					-0.027568422367949097
RMILKGKFN	9	Unmodified	_RMILKGKFN_					0	0	0			REV__ENSG00000136628|ENST00000366923|EPRS1	REV__ENSG00000136628|ENST00000366923|EPRS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8316040039062	2	553.828786	1105.64302	0.29912	0.00016566	2.5185	0.0013948	2.8176	0.0015605	553.8300566957491	102.35	0.6834	102.54	102.25	102.94	0.19484					39	16	3	0	0	0	0.7932	1	10768	10768		17.365	0	1	507320	+		49428	19322	33182	33195	55809	55809					0.09442361487458584
RMIVGKKP	8	Unmodified	_RMIVGKKP_					0	0	0		nc|ENSG00000124313|Q5JU85-3|IQSEC2;ENSG00000124313|ENST00000642864|IQSEC2	nc|ENSG00000124313|Q5JU85-3|IQSEC2	nc|ENSG00000124313|Q5JU85-3|IQSEC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7907409667969	2	464.791672	927.568792	-1.1356	-0.00052781	-1.1654	-0.00054165	-2.3009	-0.0010695	464.7910242247121	36.975	1.5496	36.999	36.145	37.695	0.023624					81	41	3	0	0	0	0.81548	1	2048	2048		20.482	1.1219	1	297830			49429	3329	33183	33196	55810	55810					0.10211018395921201
RMIYEDYISIL	11	Unmodified	_RMIYEDYISIL_					0	0	0		ENSG00000091844|ENST00000206262|RGS17	ENSG00000091844|ENST00000206262|RGS17	ENSG00000091844|ENST00000206262|RGS17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.5753173828125	3	472.579489	1414.71664	-0.46625	-0.00022034	-4.0361	-0.0019074	-4.5024	-0.0021277	472.57754406341894	33.991	0.98044	33.935	33.697	34.677	-0.056385					36	21	2	0	0	0	0.75121	1	2097	2097		21.78	2.5177	1	149320			49430	1684	33184	33197	55811	55811					0.025868203485970298
RMKIKLAP	8	Unmodified	_RMKIKLAP_					0	0	0			REV__ENST00000471860.1_1_21:18970975-18971116:-|nuORF	REV__ENST00000471860.1_1_21:18970975-18971116:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8049011230469	2	478.807322	955.600092	-1.7576	-0.00084154	-0.70314	-0.00033667	-2.4607	-0.0011782	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.83058	1	2385	2385		12.959	0	1	336090	+		49431	27243	33185	33198	55812	55812					0.12051591430008557
RMKSAVPVNTP	11	Unmodified	_RMKSAVPVNTP_					0	0	0		ENST00000380191.8_1_10:5807813-5807927:-|nuORF	ENST00000380191.8_1_10:5807813-5807927:-|nuORF	ENST00000380191.8_1_10:5807813-5807927:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.3328857421875	2	600.33189	1198.64923	-0.31484	-0.00018901	3.8448	0.0023081	3.5299	0.0021191	600.3340171924639	94.652	2.3297	94.652	93.284	95.614	0					94	54	2	0	0	0	0.68532	1	9344	9344		33.922	1.1711	1	234100			49432	10913	33186	33199	55813	55813					0.05784834928294913
RMLPLLALGLL	11	Unmodified	_RMLPLLALGLL_					0	0	0		nc|ENSG00000196136|P01011-3|SERPINA3;nc|ENSG00000196136|P01011-2|SERPINA3;ENSG00000196136|ENST00000393078|SERPINA3	nc|ENSG00000196136|P01011-3|SERPINA3	nc|ENSG00000196136|P01011-3|SERPINA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.3895263671875	2	605.391219	1208.76789	-0.53776	-0.00032555	-1.8235	-0.0011039	-2.3612	-0.0014295	605.3900141549213	45.074	0.91728	45.043	44.621	45.538	-0.031067					52	20	3	0	0	0	0.71207	1	3618	3618		9.1829	0	1	360790			49433	8017	33187	33200	55814	55814					0.17185233903956032
RMMWWRHPRWK	11	Unmodified	_RMMWWRHPRWK_					0	0	0		chr5:150392790-150396282|14|21.29|0.15|7.19|+|1|TCOF1,TCOF1|1	chr5:150392790-150396282|14|21.29|0.15|7.19|+|1|TCOF1,TCOF1|1	chr5:150392790-150396282|14|21.29|0.15|7.19|+|1|TCOF1,TCOF1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.2960205078125	3	557.287091	1668.83944	0.75013	0.00041804	2.8915	0.0016114	3.6417	0.0020295	557.2881613401182	68.174	0.54761	68.559	68.358	68.906	0.38483					12	12	2	0	0	0	0.18421	1	7476	7476		1.4188	1.0782	1	267430			49434	445	33188	33201	55815	55815					0.031778431095290216
RMPGETQE	8	Unmodified	_RMPGETQE_					0	0	0			REV__ENST00000317025.12_1_8:38205710-38239332:-|nuORF	REV__ENST00000317025.12_1_8:38205710-38239332:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2184753417969	2	474.216192	946.41783	0.78918	0.00037424	1.7244	0.00081776	2.5136	0.001192	474.21668296694435	23.753	0.77575	23.372	23.018	23.794	-0.38178					42	17	4	0	0	0	0.88601	1	1112	1112		34.173	5.023	1	342520	+		49435	24960	33189	33202	55816	55816					-0.05752212773415977
RMPKMPKVPS	10	Unmodified	_RMPKMPKVPS_					0	0	0			REV__ENST00000335765.8_1_17:26874042-26874168:-|nuORF	REV__ENST00000335765.8_1_17:26874042-26874168:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	585.82958984375	2	585.827929	1169.6413	-0.26334	-0.00015427	4.1069	0.0024059	3.8436	0.0022517	585.830277494987	57.754	1.2846	57.738	57.257	58.542	-0.01643					107	58	2	0	0	0	0.67571	1	4867	4867		45.972	12.051	1	182280	+		49436	25173	33190	33203	55817	55817					0.06326984407201053
RMRATKPT	8	Unmodified	_RMRATKPT_					0	0	0		ENST00000263196.11_1_22:19055732-19076988:-|nuORF	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	ENST00000263196.11_1_22:19055732-19076988:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.77117919921875	2	480.774011	959.533469	-2.5003	-0.0012021	-2.9045	-0.0013964	-5.4048	-0.0025985	480.7724817241375	41.101	0.70321	41.107	40.803	41.506	0.0065727					33	18	2	0	0	0	0.94135	1	3032	3032		54.776	7.119	1	446290			49437	9455	33191	33204	55818	55818					0.052083558681147224
RMRGFWARLS	10	Unmodified	_RMRGFWARLS_					0	0	0		ENST00000486702.1_1_7:99768818-99769832:-|nuORF;ENSG00000213420|ENST00000292377|GPC2	ENST00000486702.1_1_7:99768818-99769832:-|nuORF	ENST00000486702.1_1_7:99768818-99769832:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3465576171875	2	640.345666	1278.67678	1.6035	0.0010268	-0.15051	-9.6381E-05	1.453	0.00093043	640.345537292935	102.92	0.5733	102.96	102.71	103.28	0.04319					45	13	4	0	0	0	0.80179	1	11161	11161		39.253	0	1	2983300			49438	8590	33192	33205	55819	55819					0.04858782979204079
RMRGPAQAK	9	Unmodified	_RMRGPAQAK_					0	0	0		ENST00000507191.1_1_5:133295698-133304275:-|nuORF;ENST00000509913.1_1_5:133295698-133304275:-|nuORF;ENSG00000113583|ENST00000231512|C5orf15	ENST00000507191.1_1_5:133295698-133304275:-|nuORF	ENST00000507191.1_1_5:133295698-133304275:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.78485107421875	2	507.78491	1013.55527	0.51213	0.00026005	-0.68893	-0.00034983	-0.1768	-8.9775E-05	507.78450159638214	16.833	0.70228	16.345	16.098	16.8	-0.48718					32	15	4	0	0	0	0.64922	1	174	174		44.117	8.9161	1	834700			49439	2730	33193	33206	55820	55820					0.04903160616674995
RMRGPAQAK	9	Unmodified	_RMRGPAQAK_					0	0	0		ENST00000507191.1_1_5:133295698-133304275:-|nuORF;ENST00000509913.1_1_5:133295698-133304275:-|nuORF;ENSG00000113583|ENST00000231512|C5orf15	ENST00000507191.1_1_5:133295698-133304275:-|nuORF	ENST00000507191.1_1_5:133295698-133304275:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.7845458984375	2	507.78491	1013.55527	1.1228	0.00057015	-1.1618	-0.00058996	-0.039015	-1.9811E-05	507.7842156196741	16.847	0.61078	16.236	16.048	16.659	-0.6107					30	13	3	0	0	0	0.51307	1	175	175		51.335	5.3632	1	1020700			49440	2730	33193	33206	55821	55821					0.04903160616674995
RMRILHRLLRR	11	Unmodified	_RMRILHRLLRR_					0	0	0		ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENST00000432746.1_1_7:102781798-102782185:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3123779296875	3	507.324534	1518.95177	0.64836	0.00032893	-1.7738	-0.00089987	-1.1254	-0.00057094	507.6568013884013	61.58	0.12939	62.134	62.041	62.171	0.55387					4	2	2	0	0	0	0.1838	1	6584	6584		6.001	0.30226	1	26783			49441	11674	33194	33207	55822	55822					0.21305440178025492
RMRKKKRERLD	11	Unmodified	_RMRKKKRERLD_					0	0	0		ENSG00000159023|ENST00000343067|EPB41	ENSG00000159023|ENST00000343067|EPB41	ENSG00000159023|ENST00000343067|EPB41	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.97314453125	3	505.971937	1514.89398	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.93	1	108.05	107.55	108.55	0.11715								0	0	0	0.56276	1	13204	13204		9.6461	2.9865	1				49442	5507	33195	33208	55823	55823					0.15713133461940743
RMRRQHQKQLL	11	Unmodified	_RMRRQHQKQLL_					0	0	0		ENSG00000149930|ENST00000308893|TAOK2;nc|ENSG00000149930|Q9UL54-3|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2;nc|ENSG00000149930|Q9UL54-2|TAOK2	ENSG00000149930|ENST00000308893|TAOK2	ENSG00000149930|ENST00000308893|TAOK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.9579162597656	3	498.624649	1492.85212	-0.062002	-3.0916E-05	-3.0811	-0.0015363	-3.1431	-0.0015672	498.62296334525274	22.15	1.0549	21.539	20.935	21.99	-0.6107					59	26	3	0	0	0	0.76579	1	845	845		18.531	0	1	216830			49443	5055	33196	33209	55824	55824					0.125405777734386
RMRVVFTL	8	Unmodified	_RMRVVFTL_					0	0	0			REV__ENSG00000180638|ENST00000433844|SLC47A2	REV__ENSG00000180638|ENST00000433844|SLC47A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.814453125	2	511.302404	1020.59026	0.1546	7.9046E-05	2.6854	0.0013731	2.84	0.0014521	511.8057446186279	79.007	0.1282	79.418	79.354	79.482	0.4106					4	2	2	0	0	0	0.4196	1	9035	9035		25.45	0	1	55839	+		49444	22406	33197	33210	55825	55825					0.08078403424644875
RMSKQGRTI	9	Unmodified	_RMSKQGRTI_					0	0	0		nc|ENSG00000118777|Q9UNQ0-2|ABCG2;ENSG00000118777|ENST00000237612|ABCG2	nc|ENSG00000118777|Q9UNQ0-2|ABCG2	nc|ENSG00000118777|Q9UNQ0-2|ABCG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8062133789062	2	538.8033	1075.59205	2.2674	0.0012217	4.0273	0.0021699	6.2947	0.0033916	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.58668	1	9512	9512		47.657	6.8792	1	835060			49445	3044	33198	33211	55826	55826					0.057274124425930495
RMVIIKKVRKQ	11	Unmodified	_RMVIIKKVRKQ_					0	0	0		L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|53|2|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|53|2|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|53|2|sense	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.6387939453125	3	466.974508	1397.90169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.608	1	56.707	56.207	57.207	0.099186								0	0	0	0.56276	1	4771	4771		14.694	4.5898	1				49446	14640	33199	33212	55827	55827					0.21865892729533698
RMYKKRWVDFD	11	Unmodified	_RMYKKRWVDFD_					0	0	0			REV__nc|ENSG00000127603|O94854|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1	REV__nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3104248046875	3	515.266127	1542.77655	-0.59611	-0.00030716	-4.2397	-0.0021846	-4.8359	-0.0024918	515.5971612363766	59.183	0.12525	59.576	59.485	59.61	0.39209					4	2	2	0	0	0	0.18238	1	6223	6223		13.508	10.82	1	47407	+		49447	18743;29829	33200	33213	55828	55828					0.026875558024812563
RNADGLIVAS	10	Unmodified	_RNADGLIVAS_					0	0	0		nc|ENSG00000089195|Q9UJA5-4|TRMT6;ENSG00000089195|ENST00000203001|TRMT6	nc|ENSG00000089195|Q9UJA5-4|TRMT6	nc|ENSG00000089195|Q9UJA5-4|TRMT6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2801513671875	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.80179	1	8817	8817		39.253	1.4413	1	1954800			49448	1616	33201	33214	55829	55829					0.03911670812135526
RNAPRASQSD	10	Unmodified	_RNAPRASQSD_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.2764892578125	2	551.273418	1100.53228	0.32503	0.00017918	3.2742	0.001805	3.5993	0.0019842	551.2751109394707	27.083	1.2037	27.045	26.676	27.88	-0.038523					78	29	4	0	0	0	0.86218	1	1313	1313		32.812	2.3088	1	656180	+		49449	17426	33202	33215	55830	55830					-0.01396186967099311
RNAPVDIKYL	10	Unmodified	_RNAPVDIKYL_					0	0	0			REV__ENSG00000116120|ENST00000281828|FARSB	REV__ENSG00000116120|ENST00000281828|FARSB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	594.8367309570312	2	594.840405	1187.66626	-0.60024	-0.00035705	-3.2703	-0.0019453	-3.8706	-0.0023024	594.8383419849733	69.788	0.58778	69.818	69.449	70.036	0.030495					43	30	2	0	0	0	0.77314	1	6592	6592		40.778	1.5253	1	867610	+		49450	18179	33203	33216	55831	55831					0.07993078805748155
RNAPVDIKYL	10	Unmodified	_RNAPVDIKYL_					0	0	0			REV__ENSG00000116120|ENST00000281828|FARSB	REV__ENSG00000116120|ENST00000281828|FARSB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	594.839111328125	2	594.840405	1187.66626	-0.22069	-0.00013127	-3.7209	-0.0022133	-3.9416	-0.0023446	594.8381332628321	69.679	0.59947	69.642	69.378	69.978	-0.036957					55	31	2	0	0	0	0.86218	1	6756	6756		32.812	0	1	1810100	+		49451	18179	33203	33216	55832	55832					0.07993078805748155
RNCEKPLRRLL	11	Unmodified	_RNCEKPLRRLL_					0	0	0		chr2:73734588-73736617|21|21.95|0.52|5.39|-|0|TE_info:L2,L2_dup6768,L2,LINE,donor,+,73736617,73736795|TPRKB,None|4	chr2:73734588-73736617|21|21.95|0.52|5.39|-|0|TE_info:L2,L2_dup6768,L2,LINE,donor,+,73736617,73736795|TPRKB,None|4	chr2:73734588-73736617|21|21.95|0.52|5.39|-|0|TE_info:L2,L2_dup6768,L2,LINE,donor,+,73736617,73736795|TPRKB,None|4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.60797119140625	3	466.610117	1396.80852	-0.1162	-5.4221E-05	-4.3839	-0.0020456	-4.5001	-0.0020998	466.608028235663	100.63	2.2402	100.66	99.377	101.62	0.031036					154	52	4	0	0	0	0.77205	1	10643	10643		17.167	0.44936	1	499520			49452	349	33204	33217	55833	55833					0.12598968276302003
RNCMAATL	8	Carbamidomethyl (C),Oxidation (M)	_RNC(Carbamidomethyl (C))M(Oxidation (M))AATL_	RNC(1)MAATL	RNCM(1)AATL	RNC(42)MAATL	RNCM(42)AATL	0	1	1		nc|ENSG00000290798|Q9H1B4-3|NXF5;nc|ENSG00000290798|Q9H1B4-5|NXF5;nc|ENSG00000290798|Q9H1B4-4|NXF5;nc|ENSG00000290798|Q9H1B4-6|NXF5;nc|ENSG00000290798|Q9H1B4-2|NXF5;nc|ENSG00000290798|Q9H1B4|NXF5;ENSG00000269437|ENST00000602195|NXF2B;ENSG00000269405|ENST00000625106|NXF2	nc|ENSG00000290798|Q9H1B4-3|NXF5	nc|ENSG00000290798|Q9H1B4-3|NXF5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.7197265625	2	476.720587	951.426621	-1.244	-0.00059303	2.3474	0.001119	1.1034	0.000526	476.72134377163644	75.355	0.94296	75.442	75.028	75.971	0.087631					35	23	2	0	0	0	0.91005	1	6969	6969		42.474	10.945	1	106620			49453	8970	33205	33218	55834	55834	112	158			-0.05103562408578455
RNCMAATL	8	Carbamidomethyl (C),Oxidation (M)	_RNC(Carbamidomethyl (C))M(Oxidation (M))AATL_					0	1	1		nc|ENSG00000290798|Q9H1B4-3|NXF5;nc|ENSG00000290798|Q9H1B4-5|NXF5;nc|ENSG00000290798|Q9H1B4-4|NXF5;nc|ENSG00000290798|Q9H1B4-6|NXF5;nc|ENSG00000290798|Q9H1B4-2|NXF5;nc|ENSG00000290798|Q9H1B4|NXF5;ENSG00000269437|ENST00000602195|NXF2B;ENSG00000269405|ENST00000625106|NXF2	nc|ENSG00000290798|Q9H1B4-3|NXF5	nc|ENSG00000290798|Q9H1B4-3|NXF5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	476.720587	951.426621	-0.88895	-0.00042378	2.3331	0.0011122	1.4441	0.00068845	476.7210709774912	75.304	0.91837	75.429	74.922	75.841	0.12545	0.034808	0.0004627	NaN	42.474	37	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85217			49454	8970	33205	33218			112	158			-0.05103562408578455
RNCMAATL	8	Carbamidomethyl (C),Oxidation (M)	_RNC(Carbamidomethyl (C))M(Oxidation (M))AATL_					0	1	1		nc|ENSG00000290798|Q9H1B4-3|NXF5;nc|ENSG00000290798|Q9H1B4-5|NXF5;nc|ENSG00000290798|Q9H1B4-4|NXF5;nc|ENSG00000290798|Q9H1B4-6|NXF5;nc|ENSG00000290798|Q9H1B4-2|NXF5;nc|ENSG00000290798|Q9H1B4|NXF5;ENSG00000269437|ENST00000602195|NXF2B;ENSG00000269405|ENST00000625106|NXF2	nc|ENSG00000290798|Q9H1B4-3|NXF5	nc|ENSG00000290798|Q9H1B4-3|NXF5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	476.720587	951.426621	0.54989	0.00026215	0.76673	0.00036551	1.3166	0.00062766	476.72041051244395	75.179	0.75801	75.312	75.002	75.76	0.13208	-0.082871	-0.0010307	NaN	42.474	36	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93717			49455	8970	33205	33218			112	158			-0.05103562408578455
RNDGGSPH	8	Unmodified	_RNDGGSPH_					0	0	0		ENST00000547791.2_2_12:56415181-56418838:+|nuORF	ENST00000547791.2_2_12:56415181-56418838:+|nuORF	ENST00000547791.2_2_12:56415181-56418838:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1910095214844	2	420.191365	838.368178	-0.017504	-7.3551E-06	0.10202	4.2869E-05	0.084518	3.5514E-05	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.89494	1	11124	11124		37.159	1.5408	1	4147200			49456	13615	33206	33219	55835	55835					-0.057471596671916814
RNDKIELLV	9	Unmodified	_RNDKIELLV_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;nc|ENSG00000110066|Q4FZB7-2|KMT5B;nc|ENSG00000110066|Q4FZB7-4|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.3273315429688	2	550.327131	1098.63971	-0.59914	-0.00032972	0.77743	0.00042784	0.1783	9.8121E-05	550.3275633204873	100.31	1.098	100.35	99.837	100.93	0.041107					67	24	4	0	0	0	0.78536	1	10650	10650		29.15	4.9468	1	446840			49457	2506	33207	33220	55836	55836					0.09433389914420331
RNDNIDKV	8	Unmodified	_RNDNIDKV_					0	0	0			REV__ENSG00000079112|ENST00000027335|CDH17	REV__ENSG00000079112|ENST00000027335|CDH17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.0755920410156	2	487.256705	972.498858	-0.36899	-0.00017979	3.6429	0.001775	3.2739	0.0015952	487.2582095080284	59.079	0.38816	59.632	59.421	59.809	0.55323					17	9	3	0	0	0	0.4196	1	6221	6221		15.642	0	1	479780	+		49458	16776	33208	33221	55837	55837					0.011508112609931231
RNDVTVGH	8	Unmodified	_RNDVTVGH_					0	0	0			REV__ENSG00000112293|ENST00000230036|GPLD1	REV__ENSG00000112293|ENST00000230036|GPLD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.232177734375	2	449.230491	896.446428	0.9656	0.00043378	-0.74303	-0.00033379	0.22258	9.9988E-05	449.2301030462438	83.133	5.5992	83.192	80.121	85.72	0.059158					204	132	2	0	0	0	0.89962	1	8445	8445		38.806	5.2906	1	221730	+		49459	17937	33209	33222	55838	55838					-0.0059372708195724044
RNEIRRKVRP	10	Unmodified	_RNEIRRKVRP_					0	0	0			REV__ENSG00000221878|ENST00000406070|PSG7	REV__ENSG00000221878|ENST00000406070|PSG7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2740478515625	3	441.940855	1322.80073	-1.4729	-0.00065094	-0.90136	-0.00039835	-2.3743	-0.0010493	441.94033054697593	56.641	1.0598	56.713	56.56	57.62	0.071835					108	50	3	0	0	0	0.85086	1	4822	4822		19.263	0	1	756750	+		49460	23711	33210	33223	55839	55839					0.15224577071035128
RNEKEKLAKKL	11	Unmodified	_RNEKEKLAKKL_					0	0	0			REV__nc|ENSG00000155329|Q8TBK6-2|ZCCHC10	REV__nc|ENSG00000155329|Q8TBK6-2|ZCCHC10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.9482421875	3	452.948904	1355.82488	-1.1931	-0.0005404	-0.58482	-0.00026489	-1.7779	-0.0008053	453.2830739211877	107.81	0.41713	107.95	107.61	108.03	0.13867					33	10	4	0	0	0	0.73277	1	11588	11588		25.892	3.3301	1	7346700	+		49461	20425	33211	33224	55840	55840					0.1612037271402187
RNEKEKLAKKL	11	Unmodified	_RNEKEKLAKKL_					0	0	0			REV__nc|ENSG00000155329|Q8TBK6-2|ZCCHC10	REV__nc|ENSG00000155329|Q8TBK6-2|ZCCHC10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.947998046875	3	452.948904	1355.82488	0.75692	0.00034285	-2.1261	-0.00096303	-1.3692	-0.00062018	452.94782570061545	106.9	1.1199	106.99	106.6	107.72	0.091255					115	26	5	0	0	0	0.62914	2	11453	11443;11453		41.08	4.7624	1	5690500	+		49462	20425	33211	33224	55841;55842	55842					0.1612037271402187
RNEQTLLRR	9	Unmodified	_RNEQTLLRR_					0	0	0			REV__nc|ENSG00000162688|P35573-2|AGL	REV__nc|ENSG00000162688|P35573-2|AGL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	593.344482421875	2	593.344178	1184.6738	-0.61427	-0.00036447	1.0434	0.0006191	0.42913	0.00025462	593.3447041008176	103.62	2.4136	103.61	103.22	105.64	-0.0035706					155	57	4	0	0	0	0.78983	1	11152	11152		27.882	3.3631	1	2207400	+		49463	20835	33212	33225	55843	55843					0.08885231126009785
RNEVLRVKKK	10	Unmodified	_RNEVLRVKKK_					0	0	0		ENSG00000197616|ENST00000405093|MYH6	ENSG00000197616|ENST00000405093|MYH6	ENSG00000197616|ENST00000405093|MYH6	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	635.4102783203125	2	635.409321	1268.80409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.909	1	15.884	15.384	16.384	-0.024035								0	0	0	0.45132	1	88	88		15.642	0.3087	1				49464	8183	33213	33226	55844	55844					0.18043827125006828
RNFFKAVRR	9	Unmodified	_RNFFKAVRR_					0	0	0			REV__ENST00000508686.1_3_5:72861812-72861932:+|nuORF	REV__ENST00000508686.1_3_5:72861812-72861932:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.855712890625	2	597.354348	1192.69414	-0.84393	-0.00050413	3.6203	0.0021626	2.7763	0.0016585	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.7932	1	11089	11089		24.203	4.206	1	1407500	+		49465	27931	33214	33227	55845	55845					0.10550446576485228
RNFLLSKP	8	Unmodified	_RNFLLSKP_					0	0	0		ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-2|AK9;nc|ENSG00000155085|Q5TCS8-1|AK9;nc|ENSG00000155085|Q5TCS8-3|AK9;nc|ENSG00000155085|Q5TCS8-6|AK9	ENSG00000155085|ENST00000424296|AK9	ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79095458984375	2	487.792727	973.5709	-1.4525	-0.00070854	-3.1625	-0.0015427	-4.6151	-0.0022512	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.88601	1	7916	7916		34.173	6.2903	1	503530			49466	5310	33215	33228	55846	55846					0.08305770405388557
RNFMLRVP	8	Unmodified	_RNFMLRVP_					0	0	0		L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|111|3|sense	L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|111|3|sense	L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|111|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7933959960938	2	516.792204	1031.56985	-0.27573	-0.0001425	2.5152	0.0012999	2.2395	0.0011574	516.7933490368572	86.056	2.7275	86.241	84.67	87.398	0.18523					138	63	3	0	0	0	0.88915	1	8432	8432		35.201	6.0512	1	324400			49467	14581	33216	33229	55847	55847					0.055332327648102364
RNGFTVKRVG	10	Unmodified	_RNGFTVKRVG_					0	0	0			REV__ENST00000366472.5_1_1:249120450-249120786:-|nuORF	REV__ENST00000366472.5_1_1:249120450-249120786:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3297119140625	2	567.330539	1132.64652	0.77491	0.00043963	-1.6405	-0.0009307	-0.86557	-0.00049107	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.86589	1	9116	9116		29.15	0	1	6344600	+		49468	25523	33217	33230	55848	55848					0.08550747585650242
RNGGVIALES	10	Unmodified	_RNGGVIALES_					0	0	0		ENSG00000167011|ENST00000300303|NAT16	ENSG00000167011|ENST00000300303|NAT16	ENSG00000167011|ENST00000300303|NAT16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2799072265625	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.8608	1	8449	8449		34.173	1.422	1	1261800			49469	6261	33218	33231	55849	55849					0.03911670812124157
RNGLLMPLL	9	Unmodified	_RNGLLMPLL_					0	0	0		ENSG00000120289|ENST00000378982|MAGEB4;ENSG00000214107|ENST00000397548|MAGEB1	ENSG00000120289|ENST00000378982|MAGEB4	ENSG00000120289|ENST00000378982|MAGEB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8074340820312	2	513.810062	1025.60557	-0.39189	-0.00020136	-1.6821	-0.00086429	-2.074	-0.0010656	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.78851	1	4504	4504		28.254	1.4582	1	771120			49470	3124	33219	33232	55850	55850					0.09379270221802471
RNGLLMPLL	9	Unmodified	_RNGLLMPLL_					0	0	0		ENSG00000120289|ENST00000378982|MAGEB4;ENSG00000214107|ENST00000397548|MAGEB1	ENSG00000120289|ENST00000378982|MAGEB4	ENSG00000120289|ENST00000378982|MAGEB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.80908203125	2	513.810062	1025.60557	-0.82069	-0.00042168	-0.96325	-0.00049493	-1.7839	-0.0009166	513.8095156540879	56.98	2.3357	57.013	56.616	58.952	0.033184					104	77	2	0	0	0	0.7932	1	5178	5178		26.796	2.5934	1	188070			49471	3124	33219	33232	55851	55851					0.09379270221802471
RNGLLSVKG	9	Unmodified	_RNGLLSVKG_					0	0	0			REV__ENSG00000173212|ENST00000369500|MAB21L3	REV__ENSG00000173212|ENST00000369500|MAB21L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2878112792969	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.7932	1	10234	10234		21.96	1.013	1	48574000	+		49472	21902	33220	33233	55852	55852					0.0874858239999412
RNGLLSVKG	9	Unmodified	_RNGLLSVKG_					0	0	0			REV__ENSG00000173212|ENST00000369500|MAB21L3	REV__ENSG00000173212|ENST00000369500|MAB21L3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2879333496094	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.7932	1	10029	10029		26.693	1.2427	1	40161000	+		49473	21902	33220	33233	55853	55853					0.0874858239999412
RNGMLFILGL	10	Unmodified	_RNGMLFILGL_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.330078125	2	567.328619	1132.64269	-1.2008	-0.00068122	3.7984	0.0021549	2.5976	0.0014737	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.86452	1	9196	9196		30.504	1.3541	1	5763000	+		49474	22874	33221	33234	55854	55854					0.08166941767581193
RNGMLFILGL	10	Unmodified	_RNGMLFILGL_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.330078125	2	567.328619	1132.64269	1.5887	0.00090129	0.7216	0.00040939	2.3103	0.0013107	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.86452	1	9557	9557		30.504	0.18592	1	5459400	+		49475	22874	33221	33234	55855	55855					0.08166941767581193
RNGMLFILGL	10	Unmodified	_RNGMLFILGL_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3299560546875	2	567.328619	1132.64269	1.8589	0.0010546	0.20517	0.0001164	2.0641	0.001171	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.85939	2	9778	9778;9958		29.15	1.0681	1	15439000	+		49476	22874	33221	33234	55856;55857	55856					0.08166941767581193
RNGMLFILGL	10	Unmodified	_RNGMLFILGL_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3295288085938	2	567.328619	1132.64269	1.492	0.00084643	0.85585	0.00048555	2.3478	0.001332	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.86452	1	9277	9277		30.504	0	1	5346500	+		49477	22874	33221	33234	55858	55858					0.08166941767581193
RNGMLFILGL	10	Unmodified	_RNGMLFILGL_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3304443359375	2	567.328619	1132.64269	1.497	0.00084932	0.52822	0.00029968	2.0253	0.001149	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.85939	2	9900	9840;9900		30.504	0	1	15259000	+		49478	22874	33221	33234	55859;55860	55860					0.08166941767581193
RNGMLFILGL	10	Unmodified	_RNGMLFILGL_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3299560546875	2	567.328619	1132.64269	0.4851	0.00027521	1.5223	0.00086364	2.0074	0.0011388	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.86452	2	9316	9316;9389		30.504	4.9296	1	18558000	+		49479	22874	33221	33234	55861;55862	55861					0.08166941767581193
RNGMLFILGL	10	Unmodified	_RNGMLFILGL_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3297729492188	2	567.328619	1132.64269	0.79571	0.00045143	1.1706	0.0006641	1.9663	0.0011155	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.85939	3	9367	9343;9367;9537		30.504	2.4222	1	18145000	+		49480	22874	33221	33234	55863;55864;55865	55864					0.08166941767581193
RNGMLFILGL	10	Unmodified	_RNGMLFILGL_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3262939453125	2	567.328619	1132.64269	1.3743	0.0007797	1.0283	0.00058341	2.4027	0.0013631	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.84112	4	11089	11005;11029;11089;11101		37.159	4.6304	1	6182600	+		49481	22874	33221	33234	55866;55867;55868;55869	55868					0.08166941767581193
RNGMLFILGL	10	Unmodified	_RNGMLFILGL_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3270874023438	2	567.328619	1132.64269	0.27026	0.00015333	2.1429	0.0012157	2.4131	0.001369	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.86589	1	11134	11134		29.15	6.1071	1	6007000	+		49482	22874	33221	33234	55870	55870					0.08166941767581193
RNGPLLPVF	9	Unmodified	_RNGPLLPVF_					0	0	0			REV__nc|ENSG00000253729|P78527-2|PRKDC	REV__nc|ENSG00000253729|P78527-2|PRKDC	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80108642578125	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.385	1	48.422	47.922	48.922	0.037731								0	0	0	0.31088	1	3683	3683		26.796	2.5934	1		+		49483	23882	33222	33235	55871	55871					0.08122056922411502
RNGVPEIVK	9	Unmodified	_RNGVPEIVK_					0	0	0			REV__ENSG00000121879|ENST00000263967|PIK3CA	REV__ENSG00000121879|ENST00000263967|PIK3CA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.3009033203125	2	506.300916	1010.58728	-0.057036	-2.8877E-05	0.14532	7.3574E-05	0.088281	4.4697E-05	506.3009364840715	96.693	1.2093	96.756	96.133	97.342	0.062225					68	27	3	0	0	0	0.76764	1	10165	10165		34.173	5.023	1	463280	+		49484	18468	33223	33236	55872	55872					0.08240851571463281
RNHGFYRIRYI	11	Unmodified	_RNHGFYRIRYI_					0	0	0			REV__ENSG00000204147|ENST00000647317|ASAH2B	REV__ENSG00000204147|ENST00000647317|ASAH2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.9433898925781	3	498.940743	1493.8004	0.81029	0.00040429	4.4365	0.0022135	5.2468	0.0026178	498.9429898071896	50.142	0.77797	50.987	50.599	51.377	0.84501					71	18	5	0	0	0	0.71207	1	4928	4928		29.551	5.2748	1	7799100	+		49485	23016	33224	33237	55873	55873					0.07325157351169764
RNHGVVSA	8	Unmodified	_RNHGVVSA_					0	0	0		ENSG00000176399|ENST00000325870|DMRTA1;ENSG00000142700|ENST00000404795|DMRTA2	ENSG00000176399|ENST00000325870|DMRTA1	ENSG00000176399|ENST00000325870|DMRTA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2275085449219	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.90465	1	7560	7560		40.573	4.9543	1	678130			49486	7077	33225	33238	55874	55874					0.015265941262214255
RNIEEILTAR	10	Unmodified	_RNIEEILTAR_					0	0	0		ENSG00000213221|ENST00000371738|DNLZ;ENST00000481053.5_1_9:139256466-139257898:-|nuORF	ENSG00000213221|ENST00000371738|DNLZ	ENSG00000213221|ENST00000371738|DNLZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.5642395019531	3	405.566571	1213.67788	-1.0529	-0.00042701	-3.3591	-0.0013624	-4.412	-0.0017894	405.5651485487608	63.261	1.4207	63.284	62.805	64.225	0.022984					129	62	3	0	0	0	0.85692	1	5549	5549		36.318	3.2782	1	264990			49487	8583	33226	33239	55875	55875					0.0795927582908007
RNIEIAAH	8	Unmodified	_RNIEIAAH_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.2550048828125	2	462.256508	922.498464	-1.0307	-0.00047644	-0.95869	-0.00044316	-1.9894	-0.0009196	462.2559435428212	48.824	0.88636	49.283	48.779	49.665	0.45983					43	21	3	0	0	0	0.91005	1	4754	4754		42.474	0.078325	1	4622100	+		49488	23536	33227	33240	55876	55876					0.03411436331805362
RNIKDLKLAF	10	Unmodified	_RNIKDLKLAF_					0	0	0		nc|ENSG00000143324|Q9UBH6-2|XPR1;ENSG00000143324|ENST00000367590|XPR1	nc|ENSG00000143324|Q9UBH6-2|XPR1	nc|ENSG00000143324|Q9UBH6-2|XPR1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5831604003906	3	406.583674	1216.72919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.54	1	111.59	111.09	112.09	0.041832								0	0	0	0.45132	1	13493	13493		27.047	9.2142	1				49489	4619	33228	33241	55877	55877					0.1294964459377752
RNIKQGAL	8	Unmodified	_RNIKQGAL_					0	0	0		ENST00000328086.11_1_16:25268480-25268591:-|nuORF	ENST00000328086.11_1_16:25268480-25268591:-|nuORF	ENST00000328086.11_1_16:25268480-25268591:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2743835449219	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.884	1	11038	11038		33.516	3.0119	1	19085000			49490	10089	33229	33242	55878	55878					0.08152313228504227
RNILRSRLLK	10	Unmodified	_RNILRSRLLK_					0	0	0		chr18:2615314-2616437|16|17.5|0.11|7.35|+|1|NDC80,NDC80|1	chr18:2615314-2616437|16|17.5|0.11|7.35|+|1|NDC80,NDC80|1	chr18:2615314-2616437|16|17.5|0.11|7.35|+|1|NDC80,NDC80|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	423.5977783203125	3	423.613967	1267.82007	-1.7158	-0.00072684	-2.3358	-0.00098948	-4.0516	-0.0017163	423.6129098754392	105.59	0.22616	105.75	105.66	105.88	0.15924					7	5	2	0	0	0	0.37624	1	11277	11277		27.047	12.354	1	86171			49491	250	33230	33243	55879	55879					0.19687533361934584
RNIPLVCVI	9	Unmodified	_RNIPLVCVI_					0	0	0		ENST00000610085.1_1_7:148394554-148394812:-|nuORF	ENST00000610085.1_1_7:148394554-148394812:-|nuORF	ENST00000610085.1_1_7:148394554-148394812:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8101196289062	2	513.810062	1025.60557	-0.38547	-0.00019806	-1.5611	-0.00080208	-1.9465	-0.0010001	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.78851	1	4065	4065		28.254	4.0515	1	1377600			49492	14493	33231	33244	55880	55880					0.09379270221802471
RNIRHRRGE	9	Unmodified	_RNIRHRRGE_					0	0	0		ENSG00000001084|ENST00000650454|GCLC	ENSG00000001084|ENST00000650454|GCLC	ENSG00000001084|ENST00000650454|GCLC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3579711914062	2	597.339761	1192.66497	-0.66223	-0.00039557	0.42306	0.00025271	-0.23916	-0.00014286	597.3398352660062	58.78	1.2462	59.172	58.482	59.728	0.39209					79	29	5	0	0	0	0.20789	1	6232	6232		37.159	0	1	470260			49493	648	33232	33245	55881	55881					0.07634302280234806
RNKAGGLPG	9	Unmodified	_RNKAGGLPG_					0	0	0		nc|ENSG00000167741|Q6P531-2|GGT6;nc|ENSG00000167741|Q6P531|GGT6;ENSG00000167741|ENST00000381550|GGT6	nc|ENSG00000167741|Q6P531-2|GGT6	nc|ENSG00000167741|Q6P531-2|GGT6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25152587890625	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.77546	1	9171	9171		31.955	2.8053	1	2020200			49494	6325	33233	33246	55882	55882					0.04839453677379879
RNKHGSITILL	11	Unmodified	_RNKHGSITILL_					0	0	0			REV__nc|ENSG00000123572|Q7Z2Y5-2|NRK	REV__nc|ENSG00000123572|Q7Z2Y5-2|NRK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.9223327636719	3	417.922578	1250.7459	-0.96194	-0.00040202	0.30568	0.00012775	-0.65627	-0.00027427	417.922646807868	105.95	2.4445	105.95	105.29	107.73	0					194	56	4	0	0	0	0.75921	1	11000	11000		23.378	5.5448	1	9358100	+		49495	18546	33234	33247	55883	55883					0.13056145479754377
RNKHGSITILL	11	Unmodified	_RNKHGSITILL_					0	0	0			REV__nc|ENSG00000123572|Q7Z2Y5-2|NRK	REV__nc|ENSG00000123572|Q7Z2Y5-2|NRK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3803100585938	2	626.380229	1250.7459	-1.2034	-0.00075376	0.27647	0.00017318	-0.92689	-0.00058058	626.3802975335307	105.63	2.6046	105.7	104.93	107.53	0.073112					329	63	6	0	0	0	0.6921	1	11428	11428		32.812	0	1	74722000	+		49496	18546	33234	33247	55884	55884					0.13056145479754377
RNKKEICIAK	10	Unmodified	_RNKKEICIAK_					0	0	0		ENSG00000152409|ENST00000396137|JMY;nc|ENSG00000152409|Q8N9B5-2|JMY	ENSG00000152409|ENST00000396137|JMY	ENSG00000152409|ENST00000396137|JMY	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	601.8578491210938	2	601.855532	1201.69651	0.90226	0.00054303	2.8277	0.0017019	3.73	0.0022449	601.8571228928912	103.35	2.581	103.48	103.09	105.68	0.12622					132	64	4	0	0	0	0.86718	1	10937	10937		27.882	2.3082	1	2471100			49497	5173	33235	33248	55885	55885					0.10373114199296651
RNKKKLLQH	9	Unmodified	_RNKKKLLQH_					0	0	0		L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|77|3|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|77|3|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.3441332223274989|0.3959605958472513|1.76|63.0|77|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.373291015625	2	582.869831	1163.72511	2.9196	0.0017018	-3.8318	-0.0022335	-0.91221	-0.0005317	582.867503173777	99.897	2.6122	99.843	98.423	101.04	-0.053741					88	60	2	0	0	0	0.7932	1	10891	10891		18.324	0.95945	1	164770			49498	14579	33236	33249	55886	55886					0.14979599890762074
RNKKLKKKDK	10	Unmodified	_RNKKLKKKDK_					0	0	0		ENSG00000113141|ENST00000417647|IK	ENSG00000113141|ENST00000417647|IK	ENSG00000113141|ENST00000417647|IK	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4190063476562	2	643.424971	1284.83539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.154	1	16.213	15.713	16.713	0.059269								0	0	0	0.45132	1	115	115		22.58	0.61977	1				49499	2700	33237	33250	55887	55887					0.20436400159087498
RNKLNQAG	8	Unmodified	_RNKLNQAG_					0	0	0		L1M3_dup5191|chr13:100538615-100539826:-|1.143422986957237|0.4271131615856792|1.42|63.0|19|2|sense	L1M3_dup5191|chr13:100538615-100539826:-|1.143422986957237|0.4271131615856792|1.42|63.0|19|2|sense	L1M3_dup5191|chr13:100538615-100539826:-|1.143422986957237|0.4271131615856792|1.42|63.0|19|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7549133300781	2	450.754133	899.493713	-0.14135	-6.3713E-05	0.3109	0.00014014	0.16956	7.6428E-05	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.88915	1	7960	7960		35.201	1.6851	1	337080			49500	14518	33238	33251	55888	55888					0.03994552189044498
RNKLRGVQRNL	11	Unmodified	_RNKLRGVQRNL_					0	0	0		ENSG00000178971|ENST00000651323|CTC1	ENSG00000178971|ENST00000651323|CTC1	ENSG00000178971|ENST00000651323|CTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9443359375	3	451.944376	1352.8113	-0.61036	-0.00027585	-1.697	-0.00076695	-2.3073	-0.0010428	451.94349825987973	55.257	1.4276	55.22	54.668	56.095	-0.036823					123	46	4	0	0	0	0.72374	1	4603	4603		27.644	1.7522	1	459960			49501	7237	33239	33252	55889	55889					0.14900559725492712
RNKNGPAL	8	Unmodified	_RNKNGPAL_					0	0	0		ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2510070800781	2	435.251226	868.487899	-0.16621	-7.2343E-05	0.40306	0.00017543	0.23685	0.00010309	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.88915	1	7508	7508		35.201	6.0512	1	768200			49502	7091	33240	33253	55890	55890					0.048394536773685104
RNKNGPAL	8	Unmodified	_RNKNGPAL_					0	0	0		ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2514953613281	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.86791	3	7838	7567;7838;7855		35.201	7.3185	1	2823900			49503	7091	33240	33253	55891;55892;55893	55892					0.048394536773685104
RNKNGPAL	8	Unmodified	_RNKNGPAL_					0	0	0		ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2513122558594	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.86791	6	8026	7815;8026;8033;8084;8092;8184		37.028	11.578	1	3292300			49504	7091	33240	33253	55894;55895;55896;55897;55898;55899	55895					0.048394536773685104
RNKNGPAL	8	Unmodified	_RNKNGPAL_					0	0	0		ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.251708984375	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.86791	5	7690	7566;7690;7913;7938;7966		35.201	6.0512	1	3370400			49505	7091	33240	33253	55900;55901;55902;55903;55904	55901					0.048394536773685104
RNKNGPAL	8	Unmodified	_RNKNGPAL_					0	0	0		ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25140380859375	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.86791	7	7573	7573;7581;7590;7603;7610;7639;7797		37.028	6.5248	1	3322700			49506	7091	33240	33253	55905;55906;55907;55908;55909;55910;55911	55905					0.048394536773685104
RNKNGPAL	8	Unmodified	_RNKNGPAL_					0	0	0		ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2518310546875	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.86791	3	7372	7313;7357;7372		37.028	3.5129	1	712390			49507	7091	33240	33253	55912;55913;55914	55914					0.048394536773685104
RNKNGPAL	8	Unmodified	_RNKNGPAL_					0	0	0		ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2513427734375	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.86791	5	7598	7589;7598;7606;7614;7623		37.028	10.232	1	2743300			49508	7091	33240	33253	55915;55916;55917;55918;55919	55916					0.048394536773685104
RNKNGPAL	8	Unmodified	_RNKNGPAL_					0	0	0		ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25140380859375	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.86791	6	7520	7520;7538;7546;7553;7567;7581		46.766	17.617	1	2494100			49509	7091	33240	33253	55920;55921;55922;55923;55924;55925	55920					0.048394536773685104
RNKNGPAL	8	Unmodified	_RNKNGPAL_					0	0	0		ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25152587890625	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.88915	2	9050	9050;9062		37.028	1.4102	1	2020200			49510	7091	33240	33253	55926;55927	55926					0.048394536773685104
RNKNGPAL	8	Unmodified	_RNKNGPAL_					0	0	0		ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	ENSG00000176624|ENST00000406189|MEX3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2516174316406	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.86791	6	9130	9058;9082;9118;9130;9228;9299		42.474	9.662	1	2235800			49511	7091	33240	33253	55928;55929;55930;55931;55932;55933	55931					0.048394536773685104
RNKQQVIKLI	10	Unmodified	_RNKQQVIKLI_					0	0	0			REV__ENSG00000225614|ENST00000565624|ZNF469	REV__ENSG00000225614|ENST00000565624|ZNF469	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9322814941406	3	413.934706	1238.78229	-1.896	-0.00078482	-2.7964	-0.0011575	-4.6924	-0.0019423	413.93352675822	43.019	1.5308	43.025	42.029	43.559	0.0057487					104	42	4	0	0	0	0.85981	1	2984	2984		35.152	1.0655	1	469080	+		49512	23739	33241	33254	55934	55934					0.1724502237645993
RNKQQVIKLI	10	Unmodified	_RNKQQVIKLI_					0	0	0			REV__ENSG00000225614|ENST00000565624|ZNF469	REV__ENSG00000225614|ENST00000565624|ZNF469	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.932861328125	3	413.934706	1238.78229	-0.30792	-0.00012746	-4.4381	-0.0018371	-4.746	-0.0019645	413.9329171146817	43.07	1.6523	43.019	41.913	43.565	-0.050308					85	44	2	0	0	0	0.86802	1	2921	2921		27.047	6.2102	1	357350	+		49513	23739	33241	33254	55935	55935					0.1724502237645993
RNKSLLISN	9	Unmodified	_RNKSLLISN_					0	0	0		L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	522.81201171875	2	522.811648	1043.60874	-0.16795	-8.7807E-05	-1.2982	-0.00067869	-1.4661	-0.0007665	522.811533345868	96.258	1.6184	96.489	95.591	97.21	0.23103					71	37	3	0	0	0	0.76419	1	9926	9926		35.152	1.2304	1	368960			49514	14539	33242	33255	55936	55936					0.08868236600210366
RNKSLLISN	9	Unmodified	_RNKSLLISN_					0	0	0		L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	522.811648	1043.60874	-0.69008	-0.00036078	-0.36253	-0.00018954	-1.0526	-0.00055032	522.8118202963492	96.792	1.7246	96.792	95.699	97.424	0	0.25536	0.00031303	NaN	35.152	56	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108720			49515	14539	33242	33255							0.08868236600210366
RNKSLLISN	9	Unmodified	_RNKSLLISN_					0	0	0		L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	522.811648	1043.60874	-0.04124	-2.1561E-05	-0.68106	-0.00035607	-0.7223	-0.00037763	522.8114435446957	96.636	1.5047	96.698	96.133	97.638	0.062225	0.16112	-2.0026E-05	NaN	35.152	51	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	293580			49516	14539	33242	33255							0.08868236600210366
RNKSLLISN	9	Unmodified	_RNKSLLISN_					0	0	0		L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	522.811648	1043.60874	2.5433	0.0013297	-4.4818	-0.0023432	-1.9385	-0.0010135	522.8101491191474	96.486	1.4659	96.43	95.678	97.144	-0.056381	-0.10679	-0.0039942	NaN	35.152	74	33	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	326020			49517	14539	33242	33255							0.08868236600210366
RNKSLLISN	9	Unmodified	_RNKSLLISN_					0	0	0		L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	522.811648	1043.60874	1.2404	0.00064849	-2.6863	-0.0014044	-1.4459	-0.00075591	522.8108095159686	96.371	1.2051	96.419	95.922	97.127	0.047798	-0.11787	-0.0021167	NaN	35.152	56	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	341050			49518	14539	33242	33255							0.08868236600210366
RNKSLLISN	9	Unmodified	_RNKSLLISN_					0	0	0		L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	522.811648	1043.60874	0.78513	0.00041047	-1.3756	-0.00071917	-0.59046	-0.0003087	522.8110201119222	96.303	2.5891	96.467	95.474	98.063	0.16316	-0.070119	-0.00074625	NaN	35.152	69	60	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	402470			49519	14539	33242	33255							0.08868236600210366
RNKSLLISN	9	Unmodified	_RNKSLLISN_					0	0	0		L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	522.811648	1043.60874	-1.5407	-0.0008055	0.75383	0.00039411	-0.78688	-0.00041139	522.8122152698957	96.314	1.7836	96.516	95.313	97.096	0.20242	-0.020429	0.0014803	NaN	35.152	54	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	246880			49520	14539	33242	33255							0.08868236600210366
RNKSLLISN	9	Unmodified	_RNKSLLISN_					0	0	0		L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|98|2|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	522.811648	1043.60874	1.899	0.0009928	-3.3391	-0.0017457	-1.4401	-0.0007529	522.8104768007858	96.062	1.2821	96.483	95.745	97.027	0.42051	-0.054044	-0.0027993	NaN	35.152	42	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	240070			49521	14539	33242	33255							0.08868236600210366
RNKVLIKSLQ	10	Unmodified	_RNKVLIKSLQ_					0	0	0		chr3:109328024-109328890|20|198.5|0.38|9.04|-|1|DPPA4,DPPA4|1;ENST00000475135.1_1_3:109046837-109047984:-|nuORF;ENSG00000121570|ENST00000335658|DPPA4	chr3:109328024-109328890|20|198.5|0.38|9.04|-|1|DPPA4,DPPA4|1	chr3:109328024-109328890|20|198.5|0.38|9.04|-|1|DPPA4,DPPA4|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2293701171875	3	400.25919	1197.75574	-0.38353	-0.00015351	2.7038	0.0010822	2.3203	0.00092872	400.26022512924357	42.159	0.67202	42.573	42.274	42.946	0.4139					23	16	2	0	0	0	0.37624	1	3772	3772		12.957	4.5502	1	387440			49522	385	33243	33256	55937	55937					0.16477333485136114
RNKVRQSFV	9	Unmodified	_RNKVRQSFV_					0	0	0			REV__ENST00000565598.2_1_16:53404936-53406966:-|nuORF	REV__ENST00000565598.2_1_16:53404936-53406966:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3291015625	2	567.330539	1132.64652	-0.468	-0.00026551	-0.52667	-0.00029879	-0.99467	-0.0005643	567.330130226139	95.712	2.0668	95.712	95.357	97.424	0					107	47	3	0	0	0	0.74721	1	9557	9557		37.159	5.6293	1	608220	+		49523	28857	33244	33257	55938	55938					0.08550747585650242
RNKVRQSFV	9	Unmodified	_RNKVRQSFV_					0	0	0			REV__ENST00000565598.2_1_16:53404936-53406966:-|nuORF	REV__ENST00000565598.2_1_16:53404936-53406966:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3298950195312	2	567.330539	1132.64652	1.492	0.00084643	-2.5283	-0.0014344	-1.0363	-0.00058793	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.77546	1	9409	9409		31.955	2.7848	1	5346500	+		49524	28857	33244	33257	55939	55939					0.08550747585650242
RNLAARPKG	9	Unmodified	_RNLAARPKG_					0	0	0			REV__ENST00000507384.1_2_5:180219964-180220048:-|nuORF	REV__ENST00000507384.1_2_5:180219964-180220048:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79595947265625	2	491.798875	981.583196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.461	1	58.495	57.995	58.995	0.033905								0	0	0	0.30416	1	5364	5364		29.15	4.9468	1		+		49525	27903	33245	33258	55940	55940					0.09166806868415733
RNLAGKKDS	9	Unmodified	_RNLAGKKDS_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP;ENST00000573850.1_1_16:27709674-27761267:+|nuORF	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7796325683594	2	494.780348	987.546142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.244	1	85.392	84.892	85.892	0.14857								0	0	0	0.31828	1	8333	8333		24.203	1.1603	1				49526	961	33246	33259	55941	55941					0.05187090532001548
RNLAKGQL	8	Unmodified	_RNLAKGQL_					0	0	0		ENSG00000134115|ENST00000446702|CNTN6	ENSG00000134115|ENST00000446702|CNTN6	ENSG00000134115|ENST00000446702|CNTN6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2746887207031	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.85277	1	11169	11169		25.45	0	1	19085000			49527	3911	33247	33260	55942	55942					0.08152313228526964
RNLDMRIYK	9	Unmodified	_RNLDMRIYK_					0	0	0		ENST00000609841.1_1_10:42833576-42833609:-|nuORF	ENST00000609841.1_1_10:42833576-42833609:-|nuORF	ENST00000609841.1_1_10:42833576-42833609:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5746154785156	3	403.55713	1207.64956	0.84512	0.00034105	-1.872	-0.00075546	-1.0269	-0.00041441	403.55617421306613	82.043	0.11678	82.469	82.391	82.508	0.42646					4	2	2	0	0	0	0.20789	1	9475	9475		35.152	12.59	1	41660			49528	14490	33248	33261	55943	55943					0.05404254648146889
RNLFVPVFL	9	Unmodified	_RNLFVPVFL_					0	0	0		nc|ENSG00000162687|Q6UVM3-4|KCNT2;ENST00000610076.1_1_1:196227273-196577439:-|nuORF;nc|ENSG00000162687|Q6UVM3-3|KCNT2;nc|ENSG00000162687|Q6UVM3-2|KCNT2;ENSG00000162687|ENST00000294725|KCNT2;ENST00000451324.6_1_1:196367785-196577439:-|nuORF	nc|ENSG00000162687|Q6UVM3-4|KCNT2	nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.8338623046875	2	552.831852	1103.64915	0.25245	0.00013956	3.4641	0.0019151	3.7166	0.0020547	552.8337647587357	83.48	1.9763	83.645	83.104	85.081	0.1651					82	45	2	0	0	0	0.77546	1	8091	8091		31.955	1.4512	1	227090			49529	5716	33249	33262	55944	55944					0.10147202990606274
RNLGQNRNL	9	Unmodified	_RNLGQNRNL_					0	0	0			REV__ENSG00000141002|ENST00000263346|TCF25	REV__ENSG00000141002|ENST00000263346|TCF25	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	542.8019409179688	2	542.802146	1083.58974	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.354	1	81.354	80.854	81.854	0								0	0	0	0.30416	1	7543	7543		29.15	3.5755	1		+		49530	19655	33250	33263	55945	55945					0.05128700029126776
RNLKALTRLDL	11	Unmodified	_RNLKALTRLDL_					0	0	0		ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2730712890625	3	438.273499	1311.79867	-0.96199	-0.00042161	-0.26536	-0.0001163	-1.2273	-0.00053791	438.2732841967114	107.57	0.99143	107.57	106.84	107.83	0					91	23	5	0	0	0	0.75121	1	11198	11198		21.78	0	1	3871200			49531	7861	33251	33264	55946	55946					0.15524103542543344
RNLKALTRLDL	11	Unmodified	_RNLKALTRLDL_					0	0	0		ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2729797363281	3	438.273499	1311.79867	2.0595	0.00090261	-3.3503	-0.0014684	-1.2909	-0.00056576	438.2719380139852	107.11	1.2259	107.15	106.67	107.9	0.035614					128	28	5	0	0	0	0.74405	1	11691	11691		23.378	0.81632	1	4659700			49532	7861	33251	33264	55947	55947					0.15524103542543344
RNLKALTRLDL	11	Unmodified	_RNLKALTRLDL_					0	0	0		ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.27313232421875	3	438.273499	1311.79867	0.73903	0.0003239	-2.0576	-0.00090178	-1.3185	-0.00057788	438.2725101796097	107.07	1.2292	107.16	106.69	107.92	0.091255					130	29	5	0	0	0	0.75121	1	11450	11450		21.78	2.5177	1	4759800			49533	7861	33251	33264	55948	55948					0.15524103542543344
RNLKALTRLDL	11	Unmodified	_RNLKALTRLDL_					0	0	0		ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	ENSG00000187554|ENST00000642603|TLR5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2729797363281	3	438.273499	1311.79867	-1.813	-0.00079457	0.66137	0.00028986	-1.1516	-0.00050471	438.27366907360886	106.16	0.83208	106.21	105.86	106.69	0.053757					80	19	5	0	0	0	0.76892	1	11328	11328		17.833	0.6664	1	5030100			49534	7861	33251	33264	55949	55949					0.15524103542543344
RNLKGVVSA	9	Unmodified	_RNLKGVVSA_					0	0	0		ENSG00000149571|ENST00000525144|KIRREL3	ENSG00000149571|ENST00000525144|KIRREL3	ENSG00000149571|ENST00000525144|KIRREL3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2887268066406	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.88	1	117.86	117.36	118.36	-0.02433								0	0	0	0.32758	1	13055	13055		20.947	3.582	1				49535	5035	33252	33265	55950	55950					0.0874858239999412
RNLLMPGLI	9	Unmodified	_RNLLMPGLI_					0	0	0			REV__ENSG00000187091|ENST00000334661|PLCD1	REV__ENSG00000187091|ENST00000334661|PLCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8091430664062	2	513.810062	1025.60557	-0.38168	-0.00019611	-1.7037	-0.00087537	-2.0854	-0.0010715	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.7932	1	4167	4167		26.796	1.3459	1	926440	+		49536	22901	33253	33266	55951	55951					0.09379270221825209
RNLMIHLY	8	Unmodified	_RNLMIHLY_					0	0	0			REV__ENSG00000184471|ENST00000328449|C1QTNF8	REV__ENSG00000184471|ENST00000328449|C1QTNF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2930297851562	2	530.292037	1058.56952	-1.2396	-0.00065735	3.517	0.001865	2.2774	0.0012077	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.88915	1	10879	10879		35.201	0	1	1818700	+		49537	22683	33254	33267	55952	55952					0.04257813044955583
RNLQKLVLSH	10	Unmodified	_RNLQKLVLSH_					0	0	0		ENSG00000239810|ENST00000619922|PRAMEF11;ENSG00000270601|ENST00000622421|PRAMEF5;ENSG00000232423|ENST00000376189|PRAMEF6;chr1:12942540-12945353|18|14.83|0.0|20.5|-|ENST00000415464|PRAMEF6,PRAMEF6;ENSG00000280267|ENST00000624207|PRAMEF26;ENSG00000274764|ENST00000436041|PRAMEF27;ENSG00000229571|ENST00000619661|PRAMEF25;ENSG00000204505|ENST00000415919|PRAMEF9;ENSG00000204501|ENST00000376152|PRAMEF15;chr1:13068754-13073678|18|17.94|0.01|11.02|+|ENST00000614839|PRAMEF25,PRAMEF25	ENSG00000239810|ENST00000619922|PRAMEF11	ENSG00000239810|ENST00000619922|PRAMEF11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3652954101562	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85958	1	12489	12489		15.642	0.77694	1	3346600			49538	8773	33255	33268	55953	55953					0.12459876308253115
RNLQKLVLSH	10	Unmodified	_RNLQKLVLSH_					0	0	0		ENSG00000239810|ENST00000619922|PRAMEF11;ENSG00000270601|ENST00000622421|PRAMEF5;ENSG00000232423|ENST00000376189|PRAMEF6;chr1:12942540-12945353|18|14.83|0.0|20.5|-|ENST00000415464|PRAMEF6,PRAMEF6;ENSG00000280267|ENST00000624207|PRAMEF26;ENSG00000274764|ENST00000436041|PRAMEF27;ENSG00000229571|ENST00000619661|PRAMEF25;ENSG00000204505|ENST00000415919|PRAMEF9;ENSG00000204501|ENST00000376152|PRAMEF15;chr1:13068754-13073678|18|17.94|0.01|11.02|+|ENST00000614839|PRAMEF25,PRAMEF25	ENSG00000239810|ENST00000619922|PRAMEF11	ENSG00000239810|ENST00000619922|PRAMEF11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3671264648438	2	604.367121	1206.71969	3.6458	0.0022034	-4.4074	-0.0026637	-0.76167	-0.00046033	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.86218	1	12904	12904		32.812	4.9302	1	5883900			49539	8773	33255	33268	55954	55954					0.12459876308253115
RNLSGGHV	8	Unmodified	_RNLSGGHV_					0	0	0		ENSG00000186440|ENST00000641540|OR6P1	ENSG00000186440|ENST00000641540|OR6P1	ENSG00000186440|ENST00000641540|OR6P1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2263488769531	2	420.227751	838.440949	0.51188	0.00021511	-0.42574	-0.00017891	0.086147	3.6201E-05	420.22745728477395	76.673	2.5132	76.808	74.515	77.028	0.13478					135	81	3	0	0	0	0.79929	1	7021	7021		18.324	0.95945	1	323390			49540	7796	33256	33269	55955	55955					0.015265941262327942
RNLTGHEA	8	Unmodified	_RNLTGHEA_					0	0	0			REV__ENSG00000167967|ENST00000301727|E4F1	REV__ENSG00000167967|ENST00000301727|E4F1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	449.23223876953125	2	449.230491	896.446428	-1.2481	-0.0005607	1.5085	0.00067767	0.26038	0.00011697	449.23112787491493	83.63	3.2349	83.63	82.037	85.271	0					120	78	2	0	0	0	0.85277	1	7805	7805		25.45	0	1	126580	+		49541	21439	33257	33270	55956	55956					-0.0059372708195724044
RNLVTLRVDPN	11	Unmodified	_RNLVTLRVDPN_					0	0	0		ENSG00000149782|ENST00000279230|PLCB3	ENSG00000149782|ENST00000279230|PLCB3	ENSG00000149782|ENST00000279230|PLCB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.8729248046875	2	648.872768	1295.73098	1.8785	0.0012189	-3.0506	-0.0019794	-1.1721	-0.00076053	648.8707456112022	99.351	2.3226	99.398	98.454	100.78	0.047523					131	53	3	0	0	0	0.68532	1	10687	10687		33.922	2.3918	1	270500			49542	5050	33258	33271	55957	55957					0.09494653611773174
RNNKPAGL	8	Unmodified	_RNNKPAGL_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8|DNAH14	REV__nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25238037109375	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.91005	1	7751	7751		42.474	0	1	1788100	+		49543	30102	33259	33272	55958	55958					0.048394536773685104
RNPGNGFCPCS	11	Unmodified	_RNPGNGFCPCS_					0	0	0			REV__ENST00000491446.1_1_4:154073617-154077872:+|nuORF	REV__ENST00000491446.1_1_4:154073617-154077872:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.2403564453125	2	576.239675	1150.4648	-0.30586	-0.00017625	2.4784	0.0014282	2.1725	0.0012519	576.2409934715854	70.623	0.50249	70.661	70.423	70.925	0.038055					47	26	2	0	0	0	0.65746	1	6757	6757		37.812	1.3648	1	254570	+		49544	27656	33260	33273	55959	55959					-0.10441676493906016
RNPPLKLEL	9	Unmodified	_RNPPLKLEL_					0	0	0			REV__ENSG00000051341|ENST00000264233|POLQ	REV__ENSG00000051341|ENST00000264233|POLQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.3313598632812	2	540.332216	1078.64988	-0.20886	-0.00011285	-3.4522	-0.0018653	-3.661	-0.0019782	540.3302093861229	88.796	3.2752	88.865	87.488	90.763	0.068161					200	76	3	0	0	0	0.78983	1	9013	9013		27.882	1.0861	1	373860	+		49545	16382	33261	33274	55960	55960					0.1136999763964468
RNPQQRLRWWR	11	Unmodified	_RNPQQRLRWWR_					0	0	0		ENST00000519528.1_1_8:103299768-103305927:-|nuORF	ENST00000519528.1_1_8:103299768-103305927:-|nuORF	ENST00000519528.1_1_8:103299768-103305927:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	532.6304321289062	3	532.630791	1594.87055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.7	1	110.73	110.23	111.23	0.031738								0	0	0	0.56276	1	12125	12125		13.508	6.8483	1				49546	13136	33262	33275	55961	55961					0.09690455739632853
RNPQQRLRWWR	11	Unmodified	_RNPQQRLRWWR_					0	0	0		ENST00000519528.1_1_8:103299768-103305927:-|nuORF	ENST00000519528.1_1_8:103299768-103305927:-|nuORF	ENST00000519528.1_1_8:103299768-103305927:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	532.6307983398438	3	532.630791	1594.87055	0.83452	0.00044449	-2.7855	-0.0014836	-1.9509	-0.0010391	532.6292489521602	110.52	1.0072	110.59	110.11	111.12	0.073685					58	31	3	0	0	0	0.79224	1	11897	11897		12.957	4.1582	1	347430			49547	13136	33262	33275	55962	55962					0.09690455739632853
RNPTYKGR	8	Unmodified	_RNPTYKGR_					0	0	0		L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|152|3|sense	L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|152|3|sense	L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|152|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.2745056152344	2	496.275232	990.535912	-0.24206	-0.00012013	0.84584	0.00041977	0.60379	0.00029964	496.2753499826284	23.354	0.63107	23.302	23.043	23.674	-0.052114					23	20	2	0	0	0	0.89494	1	832	832		37.159	3.6435	1	36494			49548	14632	33263	33276	55963	55963					0.040265275974206816
RNPVAKIRPP	10	Unmodified	_RNPVAKIRPP_					0	0	0			REV__ENST00000546023.1_1_6:160209518-160209776:-|nuORF	REV__ENST00000546023.1_1_6:160209518-160209776:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3588256835938	2	574.356557	1146.69856	0.5994	0.00034427	-1.7354	-0.00099676	-1.136	-0.00065249	574.3554932610225	99.489	2.9336	99.712	98.122	101.06	0.22262					130	68	2	0	0	0	0.85934	1	10463	10463		35.618	7.736	1	294880	+		49549	28534	33264	33277	55964	55964					0.13107910999428896
RNQEEGLAVL	10	Unmodified	_RNQEEGLAVL_					0	0	0			REV__ENSG00000008869|ENST00000233099|HEATR5B	REV__ENSG00000008869|ENST00000233099|HEATR5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.8029174804688	2	564.80402	1127.59349	-0.31383	-0.00017725	-0.39425	-0.00022268	-0.70808	-0.00039993	564.8037100378494	44.854	0.68915	45.317	44.906	45.595	0.46313					40	16	4	0	0	0	0.57924	1	4145	4145		51.193	7.0759	1	1385900	+		49550	16144	33265	33278	55965	55965					0.03479325012335721
RNQLNMISY	9	Unmodified	_RNQLNMISY_					0	0	0			REV__nc|ENSG00000176884|Q05586-2|GRIN1	REV__nc|ENSG00000176884|Q05586-2|GRIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.78466796875	2	569.787315	1137.56008	0.90133	0.00051357	-4.2934	-0.0024463	-3.3921	-0.0019328	570.2861079064445	79.642	0.50963	79.695	79.471	79.981	0.053848					36	17	3	0	0	0	0.76255	1	7870	7870		35.618	2.8059	1	102630	+		49551	22149	33266	33279	55966	55966					-0.0032000003120629117
RNQPPLVH	8	Unmodified	_RNQPPLVH_					0	0	0			REV__nc|ENSG00000116117|Q8TEW8-6|PARD3B	REV__nc|ENSG00000116117|Q8TEW8-6|PARD3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.7696228027344	2	480.772326	959.530098	-0.89304	-0.00042935	-0.40451	-0.00019448	-1.2975	-0.00062383	480.77199336465685	41.06	0.54614	41.064	40.845	41.391	0.0043983					32	19	2	0	0	0	0.88915	1	2659	2659		35.201	1.6851	1	358340	+		49552	18178	33267	33280	55967	55967					0.04871429085744694
RNRATFTAKL	10	Unmodified	_RNRATFTAKL_					0	0	0			REV__ENST00000528023.3_1_15:41455975-41456569:+|nuORF	REV__ENST00000528023.3_1_15:41455975-41456569:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3427124023438	2	589.343646	1176.67274	0.71715	0.00042265	-1.4797	-0.00087205	-0.76255	-0.0004494	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.86763	1	11055	11055		26.693	3.1702	1	2439600	+		49553	28242	33268	33281	55968	55968					0.09147016757151505
RNRCHYGALY	10	Unmodified	_RNRCHYGALY_					0	0	0			REV__ENST00000478548.1_1_11:64573702-64573789:-|nuORF	REV__ENST00000478548.1_1_11:64573702-64573789:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.8038330078125	2	626.803831	1251.59311	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.723	1	29.79	29.29	30.29	0.066727								0	0	0	0.45132	1	1277	1277		29.15	2.4566	1		+		49554	19102	33269	33282	55969	55969					-0.022623731885005327
RNREPLICPLC	11	Unmodified	_RNREPLICPLC_					0	0	0		ENSG00000095015|ENST00000399503|MAP3K1	ENSG00000095015|ENST00000399503|MAP3K1	ENSG00000095015|ENST00000399503|MAP3K1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.5664367675781	3	438.565408	1312.6744	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.478	1	62.501	62.001	63.001	0.022984								0	0	0	0.56276	1	5450	5450		20.03	1.4994	1				49555	1717	33270	33283	55970	55970					0.0305656645923591
RNRHLFRLI	9	Unmodified	_RNRHLFRLI_					0	0	0			REV__ENSG00000074755|ENST00000381638|ZZEF1	REV__ENSG00000074755|ENST00000381638|ZZEF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.9222717285156	3	408.919391	1223.73634	3.1807	0.0013007	3.8728	0.0015837	7.0536	0.0028843	408.92095568616344	104.57	4.1233	104.61	103.07	107.19	0.039856					288	98	5	0	0	0	0.7932	1	11467	11467		13.454	0	1	4230400	+		49556	16695	33271	33284	55971	55971					0.1334242198490756
RNRKSKHL	8	Unmodified	_RNRKSKHL_					0	0	0		ENSG00000067445|ENST00000173898|TRO;nc|ENSG00000067445|Q12816-2|TRO	ENSG00000067445|ENST00000173898|TRO	ENSG00000067445|ENST00000173898|TRO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8181762695312	2	519.817599	1037.62064	0.066288	3.4458E-05	1.2788	0.00066475	1.3451	0.00069921	519.8181781419161	84.428	1.8402	84.864	83.581	85.421	0.43538					115	44	4	0	0	0	0.91472	1	9874	9874		44.117	8.4985	1	6841200			49557	1184	33272	33285	55972	55972					0.10333898134035735
RNRKSKHL	8	Unmodified	_RNRKSKHL_					0	0	0		ENSG00000067445|ENST00000173898|TRO;nc|ENSG00000067445|Q12816-2|TRO	ENSG00000067445|ENST00000173898|TRO	ENSG00000067445|ENST00000173898|TRO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8180541992188	2	519.817599	1037.62064	0.30718	0.00015968	0.937	0.00048707	1.2442	0.00064675	519.817982893576	85.216	0.64485	85.656	85.425	86.07	0.43967					43	15	3	0	0	0	0.87259	3	9976	9951;9963;9976		58.782	9.3404	1	926980			49558	1184	33272	33285	55973;55974;55975	55975					0.10333898134035735
RNRKSKHL	8	Unmodified	_RNRKSKHL_					0	0	0		ENSG00000067445|ENST00000173898|TRO;nc|ENSG00000067445|Q12816-2|TRO	ENSG00000067445|ENST00000173898|TRO	ENSG00000067445|ENST00000173898|TRO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.81787109375	2	519.817599	1037.62064	0.53043	0.00027573	0.56249	0.00029239	1.0929	0.00056812	519.8177780302549	86.129	1.5218	86.573	86.074	87.596	0.44331					94	36	4	0	0	0	0.5397	4	10077	10054;10065;10077;10101		73.975	22.639	1	1531200			49559	1184	33272	33285	55976;55977;55978;55979	55978					0.10333898134035735
RNRKSKHL	8	Unmodified	_RNRKSKHL_					0	0	0		ENSG00000067445|ENST00000173898|TRO;nc|ENSG00000067445|Q12816-2|TRO	ENSG00000067445|ENST00000173898|TRO	ENSG00000067445|ENST00000173898|TRO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8179931640625	2	519.817599	1037.62064	-0.33063	-0.00017187	1.3585	0.00070615	1.0278	0.00053429	519.818243934646	85.343	0.76443	85.79	85.471	86.235	0.44736					48	18	3	0	0	0	0.90837	3	10008	9974;10008;10022		56.721	7.2795	1	887450			49560	1184	33272	33285	55980;55981;55982	55981					0.10333898134035735
RNRKSKHL	8	Unmodified	_RNRKSKHL_					0	0	0		ENSG00000067445|ENST00000173898|TRO;nc|ENSG00000067445|Q12816-2|TRO	ENSG00000067445|ENST00000173898|TRO	ENSG00000067445|ENST00000173898|TRO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8179931640625	2	519.817599	1037.62064	-0.5555	-0.00028876	1.6625	0.00086418	1.107	0.00057542	519.8183725021587	86.178	0.98313	86.626	86.194	87.177	0.44736					65	23	3	0	0	0	0.37302	3	10123	10123;10135;10147		87.754	28.972	1	1525700			49561	1184	33272	33285	55983;55984;55985	55983					0.10333898134035735
RNRKSKHL	8	Unmodified	_RNRKSKHL_					0	0	0		ENSG00000067445|ENST00000173898|TRO;nc|ENSG00000067445|Q12816-2|TRO	ENSG00000067445|ENST00000173898|TRO	ENSG00000067445|ENST00000173898|TRO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8179931640625	2	519.817599	1037.62064	0.62872	0.00032682	0.67176	0.00034919	1.3005	0.00067602	519.8178355105972	96.042	1.6829	96.446	95.572	97.255	0.40451					106	40	3	0	0	0	0.92457	1	11535	11535		47.916	0.25827	1	1896000			49562	1184	33272	33285	55986	55986					0.10333898134035735
RNRKSKHL	8	Unmodified	_RNRKSKHL_					0	0	0		ENSG00000067445|ENST00000173898|TRO;nc|ENSG00000067445|Q12816-2|TRO	ENSG00000067445|ENST00000173898|TRO	ENSG00000067445|ENST00000173898|TRO	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	519.817599	1037.62064	-0.044772	-2.3273E-05	-0.54464	-0.00028311	-0.58941	-0.00030639	520.3183576925223	85.93	0.93882	85.997	85.598	86.537	0.067261	0.1828	-0.0017076	NaN	58.782	34	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102480			49563	1184	33272	33285							0.10333898134035735
RNRLETVT	8	Unmodified	_RNRLETVT_					0	0	0			REV__nc|ENSG00000115484|P50991-2|CCT4	REV__nc|ENSG00000115484|P50991-2|CCT4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7802429199219	2	494.780348	987.546142	-1.0197	-0.00050453	0.84608	0.00041862	-0.17362	-8.5904E-05	494.78063343938777	84.197	2.1372	84.197	83.134	85.271	0					93	51	2	0	0	0	0.87479	1	7921	7921		30.504	0	1	184680	+		49564	18124	33273	33286	55987	55987					0.05187090532012917
RNRPRKHR	8	Unmodified	_RNRPRKHR_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3405151367188	2	560.339564	1118.66457	-0.40673	-0.00022791	1.5911	0.00089156	1.1844	0.00066365	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.86288	1	10779	10779		26.796	1.222	1	60162000			49565	959	33274	33287	55988	55988					0.10998927351010934
RNRPRKHR	8	Unmodified	_RNRPRKHR_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.34033203125	2	560.339564	1118.66457	1.387	0.00077719	-0.35691	-0.00019999	1.0301	0.0005772	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.81548	1	11456	11456		20.482	0.48506	1	81463000			49566	959	33274	33287	55989	55989					0.10998927351010934
RNRPRKHR	8	Unmodified	_RNRPRKHR_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3418579101562	2	560.339564	1118.66457	1.383	0.00077498	0.0010657	5.9714E-07	1.3841	0.00077557	560.3394720232257	112.84	1.5011	112.87	112.76	114.26	0.028854					65	39	2	0	0	0	0.80706	1	12394	12394		19.36	1.0356	1	665690			49567	959	33274	33287	55990	55990					0.10998927351010934
RNRPRKHR	8	Unmodified	_RNRPRKHR_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3401489257812	2	560.339564	1118.66457	0.86177	0.00048288	0.17617	9.8717E-05	1.0379	0.0005816	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.86288	1	11078	11078		26.796	1.222	1	126390000			49568	959	33274	33287	55991	55991					0.10998927351010934
RNRPRKHR	8	Unmodified	_RNRPRKHR_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.341552734375	2	560.339564	1118.66457	-1.4185	-0.00079484	2.862	0.0016037	1.4435	0.00080884	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.81548	1	12924	12924		20.482	0.48506	1	4071000			49569	959	33274	33287	55992	55992					0.10998927351010934
RNRQNYGI	8	Unmodified	_RNRQNYGI_					0	0	0			REV__nc|ENSG00000013503|Q9NW08-2|POLR3B	REV__nc|ENSG00000013503|Q9NW08-2|POLR3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.77154541015625	2	510.770314	1019.52608	-0.64993	-0.00033197	3.2626	0.0016664	2.6127	0.0013345	510.77187525321716	71.61	0.5751	71.651	71.424	71.999	0.040222					48	23	3	0	0	0	0.884	1	6890	6890		33.516	4.366	1	203960	+		49570	16197	33275	33288	55993	55993					0.017093395920369403
RNRRLGVLY	9	Unmodified	_RNRRLGVLY_					0	0	0		chr12:132621364-132621475|26|11.65|0.3|5.28|+|ENST00000542301|P2RX2,P2RX2;nc|ENSG00000187848|Q9UBL9-2|P2RX2;nc|ENSG00000187848|Q9UBL9-3|P2RX2;ENSG00000187848|ENST00000643471|P2RX2;nc|ENSG00000187848|Q9UBL9-4|P2RX2;nc|ENSG00000187848|Q9UBL9-7|P2RX2;chr12:132619574-132619844|26|15.65|0.5|4.96|+|ENST00000449132|P2RX2,P2RX2	chr12:132621364-132621475|26|11.65|0.3|5.28|+|ENST00000542301|P2RX2,P2RX2	chr12:132621364-132621475|26|11.65|0.3|5.28|+|ENST00000542301|P2RX2,P2RX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8478393554688	2	573.846356	1145.67816	0.78893	0.00045272	1.7597	0.0010098	2.5486	0.0014625	573.847130269326	83.972	0.69629	84.031	83.761	84.457	0.05925					34	15	3	0	0	0	0.62081	1	8457	8457		45.952	1.5748	1	227830			49571	115	33276	33289	55994	55994					0.11114740339621676
RNRVPDLL	8	Unmodified	_RNRVPDLL_					0	0	0			REV__nc|ENSG00000178209|Q15149-7|PLEC	REV__nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.2998046875	2	491.793258	981.571963	0.13478	6.6286E-05	4.4765	0.0022015	4.6113	0.0022678	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.88915	1	5518	5518		35.201	1.6851	1	176030	+		49572	22265	33277	33290	55995	55995					0.08043984774269575
RNSAEVLYQIA	11	Unmodified	_RNSAEVLYQIA_					0	0	0		nc|ENSG00000032742|Q13099-3|IFT88;ENSG00000032742|ENST00000351808|IFT88;nc|ENSG00000032742|Q13099-1|IFT88	nc|ENSG00000032742|Q13099-3|IFT88	nc|ENSG00000032742|Q13099-3|IFT88	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.8938293457031	3	421.894577	1262.6619	1.0406	0.00043902	-1.9046	-0.00080352	-0.86396	-0.0003645	421.8937515207672	22.892	0.49457	22.473	22.23	22.725	-0.41879					23	11	3	0	0	0	0.70278	1	979	979		31.068	1.5174	1	61991			49573	886	33278	33291	55996	55996					0.04107569592179061
RNSKLTRLLKD	11	Unmodified	_RNSKLTRLLKD_					0	0	0		ENSG00000121621|ENST00000263181|KIF18A;ENST00000533466.1_1_11:28098218-28119398:-|nuORF	ENSG00000121621|ENST00000263181|KIF18A	ENSG00000121621|ENST00000263181|KIF18A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.6087951660156	3	448.60877	1342.80448	-1.3262	-0.00059493	2.6509	0.0011892	1.3248	0.00059431	448.6097359452046	75.096	1.0894	75.184	74.756	75.846	0.087631					82	27	5	0	0	0	0.77803	1	6959	6959		15.921	2.4127	1	417120			49574	3191	33279	33292	55997	55997					0.14679202054207963
RNSSKKKL	8	Unmodified	_RNSSKKKL_					0	0	0		ENSG00000100281|ENST00000216106|HMGXB4;ENST00000455359.5_2_22:35653519-35659991:+|nuORF	ENSG00000100281|ENST00000216106|HMGXB4	ENSG00000100281|ENST00000216106|HMGXB4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.80108642578125	2	480.801083	959.587613	-0.92579	-0.00044512	0.60221	0.00028954	-0.32358	-0.00015558	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.84341	3	9494	9494;9567;9643		40.573	13.777	1	7439400			49575	1818	33280	33293	55998;55999;56000	55998					0.10620271291338668
RNSSKKKL	8	Unmodified	_RNSSKKKL_					0	0	0		ENSG00000100281|ENST00000216106|HMGXB4;ENST00000455359.5_2_22:35653519-35659991:+|nuORF	ENSG00000100281|ENST00000216106|HMGXB4	ENSG00000100281|ENST00000216106|HMGXB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.80084228515625	2	480.801083	959.587613	-0.095214	-4.5779E-05	-0.50772	-0.00024411	-0.60293	-0.00028989	480.80074135922035	95.38	4.3631	95.446	94.67	99.033	0.065918					323	101	5	0	0	0	0.84341	1	10097	10097		24.203	0	1	17278000			49576	1818	33280	33293	56001	56001					0.10620271291338668
RNSSKKKL	8	Unmodified	_RNSSKKKL_					0	0	0		ENSG00000100281|ENST00000216106|HMGXB4;ENST00000455359.5_2_22:35653519-35659991:+|nuORF	ENSG00000100281|ENST00000216106|HMGXB4	ENSG00000100281|ENST00000216106|HMGXB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.8008728027344	2	480.801083	959.587613	-0.79098	-0.0003803	0.14535	6.9882E-05	-0.64563	-0.00031042	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.88915	1	9791	9791		35.201	1.6851	1	18644000			49577	1818	33280	33293	56002	56002					0.10620271291338668
RNSSKKKL	8	Unmodified	_RNSSKKKL_					0	0	0		ENSG00000100281|ENST00000216106|HMGXB4;ENST00000455359.5_2_22:35653519-35659991:+|nuORF	ENSG00000100281|ENST00000216106|HMGXB4	ENSG00000100281|ENST00000216106|HMGXB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.8008728027344	2	480.801083	959.587613	0.73477	0.00035328	-1.2899	-0.00062021	-0.55517	-0.00026693	480.80036646857246	95.125	4.291	95.288	94.575	98.866	0.16308					305	100	5	0	0	0	0.884	2	9843	9794;9843		35.201	4.366	1	18148000			49578	1818	33280	33293	56003;56004	56004					0.10620271291338668
RNSSKKKL	8	Unmodified	_RNSSKKKL_					0	0	0		ENSG00000100281|ENST00000216106|HMGXB4;ENST00000455359.5_2_22:35653519-35659991:+|nuORF	ENSG00000100281|ENST00000216106|HMGXB4	ENSG00000100281|ENST00000216106|HMGXB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8009948730469	2	480.801083	959.587613	-1.6775	-0.00080655	1.1222	0.00053954	-0.55533	-0.00026701	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.86288	3	9758	9758;9783;9832		31.955	5.1588	1	17379000			49579	1818	33280	33293	56005;56006;56007	56005					0.10620271291338668
RNSSKKKL	8	Unmodified	_RNSSKKKL_					0	0	0		ENSG00000100281|ENST00000216106|HMGXB4;ENST00000455359.5_2_22:35653519-35659991:+|nuORF	ENSG00000100281|ENST00000216106|HMGXB4	ENSG00000100281|ENST00000216106|HMGXB4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.8010559082031	2	480.801083	959.587613	1.8221	0.00087609	-1.8297	-0.00087971	-0.0075387	-3.6246E-06	480.8000859655465	94.893	2.2797	95.326	94.801	97.081	0.4324					179	54	5	0	0	0	0.86288	1	11314	11314		26.796	0	1	7713500			49580	1818	33280	33293	56008	56008					0.10620271291338668
RNTKTPVK	8	Unmodified	_RNTKTPVK_					0	0	0		ENSG00000102595|ENST00000376747|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2872619628906	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.82658	1	12435	12435		21.96	1.4781	1	3080300			49581	2011	33281	33294	56009	56009					0.08748582399982752
RNTLIVATN	9	Unmodified	_RNTLIVATN_					0	0	0			REV__ENSG00000071991|ENST00000262150|CDH19	REV__ENSG00000071991|ENST00000262150|CDH19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2906494140625	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.76764	1	8932	8932		34.173	0	1	9883700	+		49582	16633	33282	33295	56010	56010					0.06628261191781348
RNTPYWYF	8	Unmodified	_RNTPYWYF_					0	0	0		ENST00000485746.1_1_7:99030561-99032532:-|nuORF;ENSG00000106246|ENST00000292478|PTCD1	ENST00000485746.1_1_7:99030561-99032532:-|nuORF	ENST00000485746.1_1_7:99030561-99032532:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.7716064453125	2	573.771991	1145.52943	-0.85757	-0.00049205	0.137	7.8607E-05	-0.72057	-0.00041344	573.771928991387	37.93	0.96849	37.88	37.584	38.553	-0.050369					43	21	3	0	0	0	0.87276	1	2635	2635		29.842	0.69198	1	394790			49583	2286	33283	33296	56011	56011					-0.03751410353970641
RNTQSSSIPI	10	Unmodified	_RNTQSSSIPI_					0	0	0			REV__nc|ENSG00000119760|O94864-2|SUPT7L	REV__nc|ENSG00000119760|O94864-2|SUPT7L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.204833984375	2	551.796195	1101.57784	0.23208	0.00012806	2.8454	0.0015701	3.0774	0.0016981	552.2991301383684	33.365	0.26382	33.309	33.113	33.377	-0.056385					9	6	2	0	0	0	0.37624	1	2011	2011		24.519	8.8774	1	32318	+		49584	18375	33284	33297	56012	56012					0.031110384952853565
RNTRKKNKRVT	11	Unmodified	_RNTRKKNKRVT_					0	0	0			REV__nc|ENSG00000177324|Q8NDZ0-2|BEND2	REV__nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.623046875	3	467.623414	1399.84841	-0.9763	-0.00045654	0.88073	0.00041185	-0.095565	-4.4689E-05	467.62378407363303	107.84	0.75049	107.98	107.28	108.03	0.13866					91	18	6	0	0	0	0.73277	2	11562	11562;11574		25.892	6.2648	1	26120000	+		49585	22195	33285	33298	56013;56014	56013					0.16448231271192526
RNTRKKNKRVT	11	Unmodified	_RNTRKKNKRVT_					0	0	0			REV__nc|ENSG00000177324|Q8NDZ0-2|BEND2	REV__nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.62353515625	3	467.623414	1399.84841	0.7713	0.00036068	-0.39618	-0.00018526	0.37512	0.00017541	467.623137961311	107.87	0.64194	107.95	107.37	108.01	0.084404					70	15	6	0	0	0	0.72892	1	11554	11554		26.75	6.4347	1	22591000	+		49586	22195	33285	33298	56015	56015					0.16448231271192526
RNTRRWKRRS	10	Unmodified	_RNTRRWKRRS_					0	0	0		ENST00000338573.9_2_16:21312214-21312475:+|nuORF	ENST00000338573.9_2_16:21312214-21312475:+|nuORF	ENST00000338573.9_2_16:21312214-21312475:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.61077880859375	3	472.61162	1414.81303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.58	1	118.61	118.11	119.11	0.026466								0	0	0	0.45132	1	13049	13049		20.03	3.5006	1				49587	10206	33286	33299	56016	56016					0.12221613534052267
RNTSFEPH	8	Unmodified	_RNTSFEPH_					0	0	0			REV__ENSG00000111667|ENST00000229268|USP5	REV__ENSG00000111667|ENST00000229268|USP5	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.2353210449219	2	494.235773	986.456993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.093	1	27.134	26.634	27.634	0.040834								0	0	0	0.29264	1	1197	1197		29.15	2.3535	1		+		49588	17882	33287	33300	56017	56017					-0.03677744427534435
RNTVLSKSAT	10	Unmodified	_RNTVLSKSAT_					0	0	0		nc|ENSG00000165309|Q5W041-3|ARMC3;nc|ENSG00000165309|Q5W041-4|ARMC3;ENSG00000165309|ENST00000298032|ARMC3	nc|ENSG00000165309|Q5W041-3|ARMC3	nc|ENSG00000165309|Q5W041-3|ARMC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8064575195312	2	538.806562	1075.59857	-1.7158	-0.0009245	1.9508	0.0010511	0.23494	0.00012659	538.8077132058876	90.429	2.6922	90.899	89.762	92.454	0.47068					154	66	4	0	0	0	0.86698	1	10723	10723		28.081	0.19925	1	808590			49589	6070	33288	33301	56018	56018					0.0637962887494723
RNVALTTFL	9	Unmodified	_RNVALTTFL_					0	0	0		ENSG00000196943|ENST00000267425|NOP9	ENSG00000196943|ENST00000267425|NOP9	ENSG00000196943|ENST00000267425|NOP9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.8026733398438	2	517.803291	1033.59203	1.8454	0.00095555	-3.4835	-0.0018038	-1.6381	-0.00084821	517.8013948225781	96.741	1.9372	97.146	96.547	98.484	0.40498					84	46	2	0	0	0	0.47272	1	11624	11624		53.351	0.41475	1	864970			49590	8117	33289	33302	56019	56019					0.07657735714201408
RNVEKLQVLLN	11	Unmodified	_RNVEKLQVLLN_					0	0	0		ENST00000541805.1_1_12:64889334-64889560:+|nuORF;ENSG00000183735|ENST00000331710|TBK1	ENST00000541805.1_1_12:64889334-64889560:+|nuORF	ENST00000541805.1_1_12:64889334-64889560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.6009216308594	3	442.601504	1324.78268	1.7929	0.00079355	-2.9372	-0.0013	-1.1443	-0.00050647	442.6001215105029	103.71	1.4704	103.75	103.32	104.79	0.041481					92	35	4	0	0	0	0.77205	1	11290	11290		17.167	0	1	665090			49591	7554	33290	33303	56020	56020					0.1332839730566775
RNVERAVP	8	Unmodified	_RNVERAVP_					0	0	0		nc|ENSG00000136636|Q9Y597-3|KCTD3;nc|ENSG00000136636|Q9Y597-2|KCTD3;ENSG00000136636|ENST00000259154|KCTD3	nc|ENSG00000136636|Q9Y597-3|KCTD3	nc|ENSG00000136636|Q9Y597-3|KCTD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	471.263671875	2	470.769783	939.525013	-1.2357	-0.00058174	-0.60457	-0.00028461	-1.8403	-0.00086635	470.7697035465195	74.565	0.5463	74.651	74.48	75.026	0.085907					25	17	2	0	0	0	0.89962	1	6854	6854		38.806	3.6054	1	36932			49592	4124	33291	33304	56021	56021					0.052831252231385406
RNVERAVP	8	Unmodified	_RNVERAVP_					0	0	0		nc|ENSG00000136636|Q9Y597-3|KCTD3;nc|ENSG00000136636|Q9Y597-2|KCTD3;ENSG00000136636|ENST00000259154|KCTD3	nc|ENSG00000136636|Q9Y597-3|KCTD3	nc|ENSG00000136636|Q9Y597-3|KCTD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.76885986328125	2	470.769783	939.525013	0.2097	9.8719E-05	-1.7244	-0.0008118	-1.5147	-0.00071309	470.76868671211275	51.093	0.86503	51.845	51.491	52.356	0.75174					55	20	5	0	0	0	0.89494	1	5072	5072		37.159	0.71236	1	3620900			49593	4124	33291	33304	56022	56022					0.052831252231385406
RNVFLLKA	8	Unmodified	_RNVFLLKA_					0	0	0			REV__ENSG00000121957|ENST00000264126|GPSM2	REV__ENSG00000121957|ENST00000264126|GPSM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.80126953125	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.81548	1	9680	9680		20.482	0	1	7439400	+		49594	18474	33292	33305	56023	56023					0.1102236078503438
RNVFLLKA	8	Unmodified	_RNVFLLKA_					0	0	0			REV__ENSG00000121957|ENST00000264126|GPSM2	REV__ENSG00000121957|ENST00000264126|GPSM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.80084228515625	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.86288	1	9820	9820		26.796	0	1	17379000	+		49595	18474	33292	33305	56024	56024					0.1102236078503438
RNVFSHRLSV	10	Unmodified	_RNVFSHRLSV_					0	0	0		ENST00000422321.5_1_10:22856588-22898637:-|nuORF;nc|ENSG00000150867|P48426-2|PIP4K2A;ENSG00000150867|ENST00000376573|PIP4K2A	ENST00000422321.5_1_10:22856588-22898637:-|nuORF	ENST00000422321.5_1_10:22856588-22898637:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5641174316406	3	405.563273	1213.66799	1.5319	0.00062128	2.1099	0.00085571	3.6418	0.001477	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.86047	1	5925	5925		17.167	1.16	1	245170			49596	11479	33293	33306	56025	56025					0.06970132614378599
RNVGSQRPVLI	11	Unmodified	_RNVGSQRPVLI_					0	0	0		ENST00000209875.8_1_12:54632788-54632935:-|nuORF	ENST00000209875.8_1_12:54632788-54632935:-|nuORF	ENST00000209875.8_1_12:54632788-54632935:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.869384765625	2	619.870028	1237.7255	0.87762	0.00054401	-1.8204	-0.0011284	-0.94278	-0.0005844	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.60058	1	9884	9884		44.377	3.599	1	6574700			49597	9110	33294	33307	56026	56026					0.11614974819940471
RNVGSQRPVLI	11	Unmodified	_RNVGSQRPVLI_					0	0	0		ENST00000209875.8_1_12:54632788-54632935:-|nuORF	ENST00000209875.8_1_12:54632788-54632935:-|nuORF	ENST00000209875.8_1_12:54632788-54632935:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8690795898438	2	619.870028	1237.7255	-1.2246	-0.00075908	0.04402	2.7286E-05	-1.1806	-0.0007318	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.66929	1	9642	9642		36.447	11.928	1	3118800			49598	9110	33294	33307	56027	56027					0.11614974819940471
RNVIAARLVQI	11	Unmodified	_RNVIAARLVQI_					0	0	0		chrX:70134135-70146633|15|10.93|0.31|5.15|+|0|IGBP1,IGBP1|1	chrX:70134135-70146633|15|10.93|0.31|5.15|+|0|IGBP1,IGBP1|1	chrX:70134135-70146633|15|10.93|0.31|5.15|+|0|IGBP1,IGBP1|1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2651062011719	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.787	1	49.813	49.313	50.313	0.025574								0	0	0	0.56276	1	3873	3873		29.551	3.4874	1				49599	552	33295	33308	56028	56028					0.16172138233696387
RNVKNVTKPLN	11	Unmodified	_RNVKNVTKPLN_					0	0	0		ENST00000596528.1_1_19:23541540-23541639:-|nuORF	ENST00000596528.1_1_19:23541540-23541639:-|nuORF	ENST00000596528.1_1_19:23541540-23541639:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8824462890625	2	641.883136	1281.75172	2.2004	0.0014124	-3.2914	-0.0021127	-1.091	-0.0007003	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.69995	1	10440	10440		31.53	1.2121	1	3624200			49600	14338	33296	33309	56029	56029					0.12211243991418996
RNVLHRDLK	9	Unmodified	_RNVLHRDLK_					0	0	0		ENSG00000164885|ENST00000485972|CDK5	ENSG00000164885|ENST00000485972|CDK5	ENSG00000164885|ENST00000485972|CDK5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8432006835938	2	575.843813	1149.67307	1.9391	0.0011166	-3.5988	-0.0020723	-1.6596	-0.00095569	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.7932	1	9979	9979		26.693	0	1	5986700			49601	6016	33297	33310	56030	56030					0.10422436476960684
RNVLITVGLD	10	Unmodified	_RNVLITVGLD_					0	0	0			REV__ENSG00000148290|ENST00000371974|SURF1	REV__ENSG00000148290|ENST00000371974|SURF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.3273315429688	2	550.327131	1098.63971	3.1879	0.0017544	-3.0241	-0.0016642	0.16384	9.0164E-05	550.325464553472	100.2	1.1012	100.15	99.651	100.75	-0.052353					65	24	3	0	0	0	0.8545	1	10871	10871		36.447	6.129	1	374270	+		49602	20106	33298	33311	56031	56031					0.09433389914443069
RNVNLGCH	8	Unmodified	_RNVNLGCH_					0	0	0			REV__ENST00000314845.7_1_11:46418495-46418936:-|nuORF	REV__ENST00000314845.7_1_11:46418495-46418936:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7283630371094	2	456.727061	911.439569	-0.35137	-0.00016048	0.85177	0.00038903	0.5004	0.00022855	456.7273299077862	76.796	1.1861	77.196	76.868	78.054	0.3997					41	34	2	0	0	0	0.90024	1	8745	8745		39.021	1.993	1	464610	+		49603	24938	33299	33312	56032	56032					-0.019693632341841294
RNVSKLMHI	9	Unmodified	_RNVSKLMHI_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.31884765625	2	549.316043	1096.61753	3.3171	0.0018221	-0.33799	-0.00018566	2.9791	0.0016365	549.3157779565678	101.02	2.3329	100.97	100.53	102.87	-0.052109					129	55	4	0	0	0	0.7932	1	11047	11047		18.324	0	1	1991000			49604	7747	33300	33313	56033	56033					0.07308886965006423
RNVTVTLKHI	10	Unmodified	_RNVTVTLKHI_					0	0	0		nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2;nc|ENSG00000173698|Q8IZP9-9|ADGRG2;nc|ENSG00000173698|Q8IZP9-7|ADGRG2;nc|ENSG00000173698|Q8IZP9-6|ADGRG2;nc|ENSG00000173698|Q8IZP9-3|ADGRG2;nc|ENSG00000173698|Q8IZP9-4|ADGRG2;nc|ENSG00000173698|Q8IZP9-2|ADGRG2;ENSG00000173698|ENST00000379869|ADGRG2	nc|ENSG00000173698|Q8IZP9-8|ADGRG2	nc|ENSG00000173698|Q8IZP9-8|ADGRG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8668212890625	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.4892	1	11360	11360		56.721	1.9447	1	52150000			49605	15104	33301	33314	56034	56034					0.12612473933995716
RNVVVSRQL	9	Unmodified	_RNVVVSRQL_					0	0	0			REV__ENST00000470388.5_1_1:35944782-36019985:-|nuORF	REV__ENST00000470388.5_1_1:35944782-36019985:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.8216552734375	2	535.825089	1069.63563	-1.2709	-0.00068098	-4.119	-0.002207	-5.3899	-0.002888	535.822709520844	52.315	2.4282	52.315	51.056	53.484	0					97	46	3	0	0	0	0.74721	1	4272	4272		37.159	4.3467	1	282960	+		49606	27209	33302	33315	56035	56035					0.10359345211372784
RNWQTQVLEE	10	Unmodified	_RNWQTQVLEE_					0	0	0		ENSG00000135426|ENST00000449076|TESPA1	ENSG00000135426|ENST00000449076|TESPA1	ENSG00000135426|ENST00000449076|TESPA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77972412109375	3	434.886081	1301.63641	-1.6026	-0.00069694	-4.1863	-0.0018206	-5.7889	-0.0025175	434.8829766187451	61.761	0.51494	61.869	61.73	62.245	0.10743					32	21	2	0	0	0	0.37624	1	5364	5364		43.651	8.1551	1	101500			49607	4018	33303	33316	56036	56036					-0.002339049302463536
RNYHFVFWLKP	11	Unmodified	_RNYHFVFWLKP_					0	0	0		ENST00000215912.9_3_22:31678754-31679060:-|nuORF	ENST00000215912.9_3_22:31678754-31679060:-|nuORF	ENST00000215912.9_3_22:31678754-31679060:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	503.10723876953125	3	502.93834	1505.79319	0.074822	3.7631E-05	-0.94832	-0.00047695	-0.8735	-0.00043931	503.2732837076233	40.756	0.070732	40.711	40.674	40.745	-0.045467					4	2	2	0	0	0	0.17911	1	2607	2607		9.2118	0	1	152800			49608	9121	33304	33317	56037	56037					0.060524247507146356
RNYLLNPV	8	Unmodified	_RNYLLNPV_					0	0	0		ENSG00000185101|ENST00000332826|ANO9;nc|ENSG00000185101|A1A5B4-2|ANO9;ENST00000534161.5_1_11:418373-429524:-|nuORF;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENST00000532094.5_1_11:420655-431830:-|nuORF	ENSG00000185101|ENST00000332826|ANO9	ENSG00000185101|ENST00000332826|ANO9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.78021240234375	2	494.782359	987.550165	-1.0037	-0.00049663	-3.3955	-0.00168	-4.3992	-0.0021767	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.86288	1	8510	8510		26.796	0.10319	1	265620			49609	7679	33305	33318	56038	56038					0.05589180025708629
RNYTLPPP	8	Unmodified	_RNYTLPPP_					0	0	0		ENSG00000110851|ENST00000228437|PRDM4	ENSG00000110851|ENST00000228437|PRDM4	ENSG00000110851|ENST00000228437|PRDM4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27886962890625	2	479.261259	956.507966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.713	1	15.629	15.129	16.129	-0.083363								0	0	0	0.29245	1	70	70		30.504	5.9844	1				49610	2545	33306	33319	56039	56039					0.027972046173204035
RPAAGLKAG	9	Unmodified	_RPAAGLKAG_					0	0	0		ENST00000580238.5_2_11:46639119-46639191:+|nuORF	ENST00000580238.5_2_11:46639119-46639191:+|nuORF	ENST00000580238.5_2_11:46639119-46639191:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.75506591796875	2	420.756144	839.497735	-2.163	-0.00091008	-0.04622	-1.9447E-05	-2.2092	-0.00092953	420.7559301673431	20.73	1.3575	20.73	19.75	21.107	0					81	64	2	0	0	0	0.7932	1	519	519		17.365	0	1	64367			49611	14093	33307	33320	56040	56040					0.07156641682740883
RPAELKEAIKP	11	Unmodified	_RPAELKEAIKP_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.9202575683594	3	417.918834	1250.73467	1.9854	0.00082972	2.3576	0.00098527	4.3429	0.001815	417.91973324598933	45.042	2.3897	45.038	44.498	46.888	-0.0041618					145	56	4	0	0	0	0.74763	1	3532	3532		15.337	0.0043666	1	825880			49612	5333	33308	33321	56041	56041					0.1193332338559685
RPAEWLPAG	9	Unmodified	_RPAEWLPAG_					0	0	0		ENST00000339381.5_1_1:1268919-1269807:+|nuORF	ENST00000339381.5_1_1:1268919-1269807:+|nuORF	ENST00000339381.5_1_1:1268919-1269807:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.7642822265625	2	498.766709	995.518865	0.054896	2.738E-05	-4.1553	-0.0020725	-4.1004	-0.0020452	498.7644275162763	19.715	0.5517	19.085	18.892	19.443	-0.62961					17	11	2	0	0	0	0.62081	1	558	558		45.952	1.8352	1	123670			49613	10221	33309	33322	56042	56042					0.020926069916072265
RPAKPPVVDRS	11	Unmodified	_RPAKPPVVDRS_					0	0	0		nc|ENSG00000124356|O95630-2|STAMBP;ENSG00000124356|ENST00000394070|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3560791015625	2	611.356754	1220.69895	1.8406	0.0011253	-2.148	-0.0013132	-0.3074	-0.00018793	611.3554755611618	95.715	4.0888	96.135	95.146	99.235	0.42051					346	99	4	0	0	0	0.72918	1	11506	11506		26.693	1.1189	1	11372000			49614	3330	33310	33323	56043	56043					0.09743285928584555
RPALLAETP	9	Unmodified	_RPALLAETP_					0	0	0		ENST00000262462.8_1_5:128301784-128301916:+|nuORF	ENST00000262462.8_1_5:128301784-128301916:+|nuORF	ENST00000262462.8_1_5:128301784-128301916:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.9295654296875	2	484.282192	966.549831	0.49784	0.00024109	-0.53898	-0.00026102	-0.04114	-1.9923E-05	484.28158890126895	26.798	0.52744	26.839	26.674	27.201	0.040834					19	15	2	0	0	0	0.20789	1	1148	1148		37.159	18.835	1	24348			49615	9441	33311	33324	56044	56044					0.06521760305838598
RPALLAETP	9	Unmodified	_RPALLAETP_					0	0	0		ENST00000262462.8_1_5:128301784-128301916:+|nuORF	ENST00000262462.8_1_5:128301784-128301916:+|nuORF	ENST00000262462.8_1_5:128301784-128301916:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	484.282192	966.549831	-0.86531	-0.00041905	3.8754	0.0018768	3.0101	0.0014577	484.2828210966799	27.004	0.30199	27.071	26.922	27.224	0.066877	0.12315	0.0030329	NaN	37.159	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49318			49616	9441	33311	33324							0.06521760305838598
RPALNAQGG	9	Unmodified	_RPALNAQGG_					0	0	0		nc|ENSG00000037749|P55082-2|MFAP3;ENSG00000037749|ENST00000522782|MFAP3	nc|ENSG00000037749|P55082-2|MFAP3	nc|ENSG00000037749|P55082-2|MFAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2411193847656	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.7932	1	8055	8055		25.45	0	1	1219900			49617	909	33312	33325	56045	56045					0.021228632977113193
RPALPKTRPY	10	Unmodified	_RPALPKTRPY_					0	0	0		ENST00000246657.2_1_17:38710548-38710746:-|nuORF	ENST00000246657.2_1_17:38710548-38710746:-|nuORF	ENST00000246657.2_1_17:38710548-38710746:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2392883300781	3	400.240018	1197.69823	-0.057483	-2.3007E-05	0.62897	0.00025174	0.57148	0.00022873	400.24018208852016	19.59	0.45808	18.96	18.756	19.214	-0.6296					21	9	3	0	0	0	0.86621	1	539	539		26.063	2.6855	1	162200			49618	9273	33313	33326	56046	56046					0.10728491279564878
RPALVPAFS	9	Unmodified	_RPALVPAFS_					0	0	0		ENST00000477680.5_1_7:4829853-4831013:+|nuORF	ENST00000477680.5_1_7:4829853-4831013:+|nuORF	ENST00000477680.5_1_7:4829853-4831013:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.278076171875	2	479.279452	956.544351	-0.4544	-0.00021779	-3.2446	-0.0015551	-3.699	-0.0017728	479.2777888563568	97.247	1.3159	97.295	96.739	98.055	0.048157					88	30	4	0	0	0	0.78058	1	10351	10351		30.504	0.6621	1	962360			49619	12359	33314	33327	56047	56047					0.06434081514032641
RPAMATKC	8	Unmodified	_RPAMATKC_					0	0	0			REV__ENST00000342272.3_1_20:42806570-42815011:-|nuORF	REV__ENST00000342272.3_1_20:42806570-42815011:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2212219238281	2	439.222765	876.430978	0.25845	0.00011352	-3.4159	-0.0015003	-3.1574	-0.0013868	439.2211637207704	17.879	0.68422	17.396	17.153	17.838	-0.48256					24	14	2	0	0	0	0.87922	1	321	321		31.955	5.1588	1	136610	+		49620	25271	33315	33328	56048	56048					-0.01218053195009361
RPAPDFQLPQ	10	Unmodified	_RPAPDFQLPQ_					0	0	0			REV__ENST00000522113.1_1_8:30643753-30643988:-|nuORF	REV__ENST00000522113.1_1_8:30643753-30643988:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.8076782226562	2	584.809105	1167.60366	-1.4001	-0.00081878	-0.41383	-0.00024201	-1.8139	-0.0010608	584.8087827244572	43.925	1.0089	44.375	43.963	44.972	0.45024					75	24	4	0	0	0	0.49268	1	4039	4039		56.434	10.462	1	5003400	+		49621	28128	33316	33329	56049	56049					0.026559327375707653
RPAPDFQLPQ	10	Unmodified	_RPAPDFQLPQ_					0	0	0			REV__ENST00000522113.1_1_8:30643753-30643988:-|nuORF	REV__ENST00000522113.1_1_8:30643753-30643988:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.8091430664062	2	584.809105	1167.60366	-1.7945	-0.0010495	-0.31235	-0.00018266	-2.1069	-0.0012321	584.8088382688337	43.722	1.0102	44.496	44.103	45.113	0.77379					68	24	4	0	0	0	0.44803	2	4015	4003;4015		60.118	14.146	1	5197200	+		49622	28128	33316	33329	56050;56051	56051					0.026559327375707653
RPAPDFQLPQ	10	Unmodified	_RPAPDFQLPQ_					0	0	0			REV__ENST00000522113.1_1_8:30643753-30643988:-|nuORF	REV__ENST00000522113.1_1_8:30643753-30643988:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	584.809105	1167.60366	0.65207	0.00038133	-6.276	-0.0036703	-5.6239	-0.0032889	584.8053279904491	44.559	0.16721	44.567	44.422	44.589	0.0084534	0.08762	-0.0067963	NaN	60.118	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41514	+		49623	28128	33316	33329							0.026559327375707653
RPAPKWYL	8	Unmodified	_RPAPKWYL_					0	0	0			REV__nc|ENSG00000259024|Q96ET8|TVP23C	REV__nc|ENSG00000259024|Q96ET8|TVP23C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.797119140625	2	515.795269	1029.57599	0.2493	0.00012859	1.5101	0.00077889	1.7594	0.00090748	515.7962101314712	19.318	0.54216	18.689	18.533	19.075	-0.6296					17	11	2	0	0	0	0.86791	1	510	510		28.254	0.37203	1	129700	+		49624	30246	33317	33330	56052	56052					0.062380742679806644
RPAPKWYL	8	Unmodified	_RPAPKWYL_					0	0	0			REV__nc|ENSG00000259024|Q96ET8|TVP23C	REV__nc|ENSG00000259024|Q96ET8|TVP23C	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	515.795269	1029.57599	0.096739	4.9897E-05	2.7737	0.0014306	2.8704	0.0014805	515.7967559721397	18.393	0.20693	18.46	18.371	18.578	0.066298	-0.15912	0.0015603	NaN	28.254	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54036	+		49625	30246	33317	33330							0.062380742679806644
RPAPKWYL	8	Unmodified	_RPAPKWYL_					0	0	0			REV__nc|ENSG00000259024|Q96ET8|TVP23C	REV__nc|ENSG00000259024|Q96ET8|TVP23C	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	515.795269	1029.57599	0.2493	0.00012859	1.5101	0.00077889	1.7594	0.00090748	515.7962101314712	19.318	0.54216	18.689	18.533	19.075	-0.6296	0.069774	0.0002568	NaN	28.254	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129700	+		49626	30246	33317	33330							0.062380742679806644
RPAPVEVTY	9	Unmodified	_RPAPVEVTY_					0	0	0		ENSG00000112245|ENST00000626021|PTP4A1	ENSG00000112245|ENST00000626021|PTP4A1	ENSG00000112245|ENST00000626021|PTP4A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2757568359375	2	516.279649	1030.54475	-0.54379	-0.00028075	-2.5153	-0.0012986	-3.0591	-0.0015794	516.2782073574077	43.394	0.96505	43.836	43.428	44.393	0.44172					65	23	4	0	0	0	0.01944	6	3909	3899;3909;3920;3931;3944;3959		125.81	26.439	1	5690700			49627	2645	33318	33331	56053;56054;56055;56056;56057;56058	56054					0.030694564432451443
RPAPVEVTY	9	Unmodified	_RPAPVEVTY_					0	0	0		ENSG00000112245|ENST00000626021|PTP4A1	ENSG00000112245|ENST00000626021|PTP4A1	ENSG00000112245|ENST00000626021|PTP4A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2774047851562	2	516.279649	1030.54475	-1.746	-0.00090143	-0.77454	-0.00039988	-2.5205	-0.0013013	516.2790765169598	43.157	0.88124	43.931	43.582	44.463	0.7738					64	21	4	0	0	0	0.01944	5	3895	3885;3895;3907;3919;3933		125.81	36.637	1	5641400			49628	2645	33318	33331	56059;56060;56061;56062;56063	56060					0.030694564432451443
RPAQTAPP	8	Unmodified	_RPAQTAPP_					0	0	0			REV__nc|ENSG00000117425|Q9Y6C5-2|PTCH2	REV__nc|ENSG00000117425|Q9Y6C5-2|PTCH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7750244140625	2	419.232502	836.450451	0.20905	8.7641E-05	3.7135	0.0015568	3.9226	0.0016445	419.2359358810254	42.596	0.21914	42.661	42.462	42.681	0.065037					7	5	2	0	0	0	0.4196	1	2878	2878		33.516	0	1	34300	+		49629	18261	33319	33332	56064	56064					0.025683624117505133
RPARHLRLFRH	11	Unmodified	_RPARHLRLFRH_					0	0	0			REV__ENST00000434316.6_1_13:114193706-114203864:+|nuORF	REV__ENST00000434316.6_1_13:114193706-114203864:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.9588928222656	3	486.96036	1457.85925	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.97	1	102.98	102.48	103.48	0.0082016								0	0	0	0.56276	1	11050	11050		9.2118	0.80454	1		+		49630	26664	33320	33333	56065	56065					0.14863678436131522
RPARQTDRRRR	11	Unmodified	_RPARQTDRRRR_					0	0	0		ENST00000396757.5_1_9:35615990-35616170:-|nuORF	ENST00000396757.5_1_9:35615990-35616170:-|nuORF	ENST00000396757.5_1_9:35615990-35616170:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.95367431640625	3	489.954046	1466.84031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.746	1	62.769	62.269	63.269	0.022984								0	0	0	0.56276	1	5475	5475		12.957	0	1				49631	11122	33321	33334	56066	56066					0.12556097074434547
RPARRSPFLPL	11	Unmodified	_RPARRSPFLPL_					0	0	0			REV__ENST00000321394.11_1_6:160210531-160210732:-|nuORF	REV__ENST00000321394.11_1_6:160210531-160210732:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26776123046875	3	437.266568	1308.77787	1.1681	0.00051075	1.7871	0.00078144	2.9551	0.0012922	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.74405	1	4532	4532		23.378	4.4116	1	4130900	+		49632	25010	33322	33335	56067	56067					0.13583557953552372
RPARRSPFLPL	11	Unmodified	_RPARRSPFLPL_					0	0	0			REV__ENST00000321394.11_1_6:160210531-160210732:-|nuORF	REV__ENST00000321394.11_1_6:160210531-160210732:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2681579589844	3	437.266568	1308.77787	0.29718	0.00012995	2.7258	0.0011919	3.023	0.0013219	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.75121	1	4225	4225		21.78	4.6137	1	4533800	+		49633	25010	33322	33335	56068	56068					0.13583557953552372
RPARRSPFLPL	11	Unmodified	_RPARRSPFLPL_					0	0	0			REV__ENST00000321394.11_1_6:160210531-160210732:-|nuORF	REV__ENST00000321394.11_1_6:160210531-160210732:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2679748535156	3	437.266568	1308.77787	-0.49223	-0.00021524	3.5152	0.0015371	3.023	0.0013218	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.74405	1	4052	4052		23.378	0.79825	1	3262400	+		49634	25010	33322	33335	56069	56069					0.13583557953552372
RPARRSPFLPL	11	Unmodified	_RPARRSPFLPL_					0	0	0			REV__ENST00000321394.11_1_6:160210531-160210732:-|nuORF	REV__ENST00000321394.11_1_6:160210531-160210732:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2679443359375	3	437.266568	1308.77787	-0.53562	-0.00023421	3.585	0.0015676	3.0494	0.0013334	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.74405	1	4203	4203		23.378	1.5975	1	4132000	+		49635	25010	33322	33335	56070	56070					0.13583557953552372
RPASALAPP	9	Unmodified	_RPASALAPP_					0	0	0			REV__ENST00000564033.1_1_16:2086391-2086732:+|nuORF	REV__ENST00000564033.1_1_16:2086391-2086732:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2562255859375	2	440.255977	878.497401	-0.15766	-6.9413E-05	-1.402	-0.00061726	-1.5597	-0.00068667	440.255318055682	75.69	0.48738	75.736	75.434	75.922	0.045952					25	14	2	0	0	0	0.62081	1	7272	7272		45.952	5.3793	1	76989	+		49636	28829	33323	33336	56071	56071					0.05329221962892916
RPASALAPP	9	Unmodified	_RPASALAPP_					0	0	0			REV__ENST00000564033.1_1_16:2086391-2086732:+|nuORF	REV__ENST00000564033.1_1_16:2086391-2086732:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	440.255977	878.497401	-0.15766	-6.9413E-05	-1.402	-0.00061726	-1.5597	-0.00068667	440.255318055682	75.69	0.48738	75.736	75.434	75.922	0.045952	0.16689	-0.00019405	NaN	45.952	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76989	+		49637	28829	33323	33336							0.05329221962892916
RPASALAPP	9	Unmodified	_RPASALAPP_					0	0	0			REV__ENST00000564033.1_1_16:2086391-2086732:+|nuORF	REV__ENST00000564033.1_1_16:2086391-2086732:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	440.255977	878.497401	-0.31439	-0.00013841	-1.3157	-0.00057923	-1.63	-0.00071764	440.2551389048843	75.663	0.81265	75.617	75.293	76.105	-0.045982	0.047087	-0.00011799	NaN	45.952	26	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71711	+		49638	28829	33323	33336							0.05329221962892916
RPASALAPP	9	Unmodified	_RPASALAPP_					0	0	0			REV__ENST00000564033.1_1_16:2086391-2086732:+|nuORF	REV__ENST00000564033.1_1_16:2086391-2086732:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	440.255977	878.497401	1.0466	0.00046079	-2.2095	-0.00097274	-1.1629	-0.00051196	440.2548257680922	75.575	0.82625	75.622	74.981	75.807	0.046448	0.052236	-0.00090502	NaN	45.952	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76130	+		49639	28829	33323	33336							0.05329221962892916
RPASALAPP	9	Unmodified	_RPASALAPP_					0	0	0			REV__ENST00000564033.1_1_16:2086391-2086732:+|nuORF	REV__ENST00000564033.1_1_16:2086391-2086732:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	440.255977	878.497401	-1.4732	-0.0006486	0.019542	8.6034E-06	-1.4537	-0.00064	440.255873281753	75.377	0.64651	75.502	75.091	75.737	0.12545	-0.067172	0.0010577	NaN	45.952	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97336	+		49640	28829	33323	33336							0.05329221962892916
RPASLIDKIE	10	Unmodified	_RPASLIDKIE_					0	0	0		ENST00000369494.5_1_1:116925078-116925195:+|nuORF	ENST00000369494.5_1_1:116925078-116925195:+|nuORF	ENST00000369494.5_1_1:116925078-116925195:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.3306884765625	2	571.332413	1140.65027	0.87236	0.00049841	-3.3864	-0.0019347	-2.514	-0.0014363	571.3304741505596	102.17	3.4204	102.3	101.59	105.01	0.13523					157	84	4	0	0	0	0.86587	1	10740	10740		29.17	0	1	3995900			49641	10619	33324	33337	56072	56072					0.08557372568861865
RPASLQVPNVL	11	Unmodified	_RPASLQVPNVL_					0	0	0		nc|ENSG00000115966|P15336-3|ATF2;nc|ENSG00000115966|P15336-7|ATF2;nc|ENSG00000115966|P15336-4|ATF2;nc|ENSG00000115966|P15336-5|ATF2;ENSG00000115966|ENST00000264110|ATF2	nc|ENSG00000115966|P15336-3|ATF2	nc|ENSG00000115966|P15336-3|ATF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8572998046875	2	597.35368	1192.69281	2.4166	0.0014436	0.49195	0.00029387	2.9086	0.0017374	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.67778	1	10255	10255		35.152	4.6484	1	8047600			49642	2887	33325	33338	56073	56073					0.10416767697074647
RPASLQVPNVL	11	Unmodified	_RPASLQVPNVL_					0	0	0		nc|ENSG00000115966|P15336-3|ATF2;nc|ENSG00000115966|P15336-7|ATF2;nc|ENSG00000115966|P15336-4|ATF2;nc|ENSG00000115966|P15336-5|ATF2;ENSG00000115966|ENST00000264110|ATF2	nc|ENSG00000115966|P15336-3|ATF2	nc|ENSG00000115966|P15336-3|ATF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8560791015625	2	597.35368	1192.69281	0.84118	0.00050248	2.6619	0.0015901	3.503	0.0020926	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.65746	1	9704	9704		37.812	1.3648	1	18777000			49643	2887	33325	33338	56074	56074					0.10416767697074647
RPASVKVPKVI	11	Unmodified	_RPASVKVPKVI_					0	0	0			REV__ENSG00000114391|ENST00000394077|RPL24	REV__ENSG00000114391|ENST00000394077|RPL24	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.3040161132812	2	597.390065	1192.76558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.29	1	118.35	117.85	118.85	0.060135								0	0	0	0.56276	1	12457	12457		12.812	3.6288	1		+		49644	18044	33326	33339	56075	56075					0.1769052149052186
RPATRPGPS	9	Unmodified	_RPATRPGPS_					0	0	0			REV__nc|ENSG00000173818|Q8N8Q3-3|ENDOV	REV__nc|ENSG00000173818|Q8N8Q3-3|ENDOV	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.76153564453125	2	469.761958	937.509363	0.13992	6.5729E-05	-1.2577	-0.0005908	-1.1177	-0.00052507	469.7613068625106	35.735	1.6772	35.674	35.283	36.96	-0.060337					67	47	2	0	0	0	0.77696	1	1924	1924		31.53	2.3598	1	144740	+		49645	30037	33327	33340	56076	56076					0.03810838706078812
RPCAQDNLLPS	11	Unmodified	_RPCAQDNLLPS_					0	0	0			REV__ENSG00000152767|ENST00000319562|FARP1	REV__ENSG00000152767|ENST00000319562|FARP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	607.2997436523438	2	607.303329	1212.59211	0.079075	4.8022E-05	-2.4064	-0.0014614	-2.3274	-0.0014134	607.3016709049745	58.644	0.6612	59.197	58.837	59.498	0.55323					35	15	3	0	0	0	0.43778	1	6169	6169		56.434	17.68	1	583710	+		49646	20315	33328	33341	56077	56077					-0.005686323480858846
RPCAQDNLLPS	11	Unmodified	_RPCAQDNLLPS_					0	0	0			REV__ENSG00000152767|ENST00000319562|FARP1	REV__ENSG00000152767|ENST00000319562|FARP1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	607.303329	1212.59211	0.079075	4.8022E-05	-2.4064	-0.0014614	-2.3274	-0.0014134	607.3016709049745	58.644	0.6612	59.197	58.837	59.498	0.55323	0.015969	-0.00041943	NaN	56.434	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	583710	+		49647	20315	33328	33341							-0.005686323480858846
RPCPGEGPGP	10	Unmodified	_RPCPGEGPGP_					0	0	0		ENST00000511998.1_1_3:129034238-129036147:+|nuORF	ENST00000511998.1_1_3:129034238-129036147:+|nuORF	ENST00000511998.1_1_3:129034238-129036147:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7286071777344	2	483.726726	965.4389	-0.17344	-8.3898E-05	4.2936	0.0020769	4.1201	0.001993	483.7285884211748	74.404	1.2386	74.795	74.5	75.738	0.39111					50	29	3	0	0	0	0.67571	1	8388	8388		45.972	8.8131	1	561290			49648	13029	33329	33342	56078	56078					-0.04520202673882068
RPDKLFLLP	9	Unmodified	_RPDKLFLLP_					0	0	0			REV__ENSG00000076258|ENST00000367749|FMO4	REV__ENSG00000076258|ENST00000367749|FMO4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.8060913085938	2	549.837134	1097.65972	0.15955	8.7726E-05	-4.4024	-0.0024206	-4.2429	-0.0023329	549.8345771699076	29.969	0.69124	29.879	29.663	30.354	-0.089544					23	15	2	0	0	0	0.20789	1	1947	1947		54.776	12.38	1	141560	+		49649	16724	33330	33343	56079	56079					0.11479185645021062
RPDKLLAKD	9	Unmodified	_RPDKLLAKD_					0	0	0			REV__ENSG00000158315|ENST00000372990|RHBDL2	REV__ENSG00000158315|ENST00000372990|RHBDL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.3134765625	2	528.314023	1054.61349	2.8563	0.001509	-2.641	-0.0013953	0.2152	0.0001137	528.3126813461913	98.458	1.2186	98.403	97.86	99.078	-0.054825					71	27	4	0	0	0	0.76764	1	10626	10626		34.173	2.6427	1	423590	+		49650	20601	33331	33344	56080	56080					0.08837120742941806
RPDPHHLLA	9	Unmodified	_RPDPHHLLA_					0	0	0			REV__ENST00000392650.7_1_17:71382642-71386472:-|nuORF	REV__ENST00000392650.7_1_17:71382642-71386472:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.2905883789062	2	528.290882	1054.56721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.24	1	104.43	103.93	104.93	0.18887								0	0	0	0.32039	1	12686	12686		44.117	4.0586	1		+		49651	26025	33332	33345	56081	56081					0.042111006315280974
RPDPLLVLF	9	Unmodified	_RPDPLLVLF_					0	0	0			REV__ENST00000493544.1_1_2:242054361-242072488:-|nuORF	REV__ENST00000493544.1_1_2:242054361-242072488:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.3244018554688	2	535.32386	1068.63317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.04	1	108.04	107.54	108.54	0								0	0	0	0.33301	1	11251	11251		19.36	0	1		+		49652	27698	33333	33346	56082	56082					0.10159496753703934
RPEASEKAL	9	Unmodified	_RPEASEKAL_					0	0	0		ENSG00000188620|ENST00000357878|HMX3	ENSG00000188620|ENST00000357878|HMX3	ENSG00000188620|ENST00000357878|HMX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7729187011719	2	500.774731	999.534909	0.11433	5.7255E-05	-4.409	-0.0022079	-4.2946	-0.0021507	500.7718281262615	76.373	0.62024	76.941	76.641	77.261	0.56835					27	18	3	0	0	0	0.76255	1	8714	8714		35.618	3.6634	1	190100			49653	7943	33334	33347	56083	56083					0.03512268437839339
RPEIAQLVMVY	11	Unmodified	_RPEIAQLVMVY_					0	0	0			REV__ENSG00000158258|ENST00000458420|CLSTN2	REV__ENSG00000158258|ENST00000458420|CLSTN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2550048828125	3	440.244441	1317.71149	0.37961	0.00016712	-2.1336	-0.00093933	-1.754	-0.0007722	440.5768562757648	60.726	0.14766	60.843	60.717	60.864	0.11676					6	4	2	0	0	0	0.17339	1	5272	5272		38.754	5.7142	1	24404	+		49654	20598	33335	33348	56084	56084					0.06534561276612294
RPEPLLLPFLA	11	Unmodified	_RPEPLLLPFLA_					0	0	0		ENST00000289921.7_1_8:21961277-21961604:+|nuORF	ENST00000289921.7_1_8:21961277-21961604:+|nuORF	ENST00000289921.7_1_8:21961277-21961604:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5927429199219	3	422.592058	1264.75434	-0.18605	-7.8623E-05	1.5124	0.00063911	1.3263	0.00056049	422.59257278124653	58.831	1.5397	58.817	57.968	59.508	-0.013729					80	49	3	0	0	0	0.72739	1	5394	5394		27.047	4.4677	1	107360			49655	9670	33336	33349	56085	56085					0.13255699396381715
RPEPLRRL	8	Unmodified	_RPEPLRRL_					0	0	0		ENST00000496749.1_1_14:51297263-51297419:-|nuORF	ENST00000496749.1_1_14:51297263-51297419:-|nuORF	ENST00000496749.1_1_14:51297263-51297419:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8202514648438	2	518.82235	1035.63015	-0.34633	-0.00017969	-3.8038	-0.0019735	-4.1502	-0.0021532	518.8202184193593	48.507	1.0068	48.976	48.668	49.675	0.46941					65	24	4	0	0	0	0.87922	1	4694	4694		31.955	0	1	3465900			49656	12791	33337	33350	56086	56086					0.11375666419553454
RPEPPKILV	9	Unmodified	_RPEPPKILV_					0	0	0		ENSG00000198173|ENST00000358047|FAM47C	ENSG00000198173|ENST00000358047|FAM47C	ENSG00000198173|ENST00000358047|FAM47C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8268432617188	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.78058	1	10610	10610		30.504	1.3541	1	23918000			49657	8249	33338	33351	56087	56087					0.12214899127980061
RPEPRPPQ	8	Unmodified	_RPEPRPPQ_					0	0	0		ENSG00000275832|ENST00000622683|ARHGAP23;nc|ENSG00000275832|Q9P227-2|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7689208984375	2	488.769783	975.525013	0.15089	7.3748E-05	0.40125	0.00019612	0.55213	0.00026987	488.76978015267747	17.416	0.27023	16.805	16.659	16.929	-0.6107					9	5	2	0	0	0	0.87922	1	265	265		31.955	6.5047	1	96108			49658	9007	33339	33352	56088	56088					0.03627125223135863
RPEPRPPQ	8	Unmodified	_RPEPRPPQ_					0	0	0		ENSG00000275832|ENST00000622683|ARHGAP23;nc|ENSG00000275832|Q9P227-2|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	488.769783	975.525013	0.29335	0.00014338	0.0043803	2.1409E-06	0.29773	0.00014552	488.76955065719056	17.357	0.27285	16.874	16.718	16.991	-0.48256	0.034753	-0.00018627	NaN	31.955	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92960			49659	9007	33339	33352							0.03627125223135863
RPERAPSA	8	Unmodified	_RPERAPSA_					0	0	0		chr5:69844913-70420249|13|11.62|0.38|4.93|+|2|TE_info:LTR12E,LTR12E_dup46,ERV1,LTR,donor,+,69844126,69844913|None,GTF2H2B|2	chr5:69844913-70420249|13|11.62|0.38|4.93|+|2|TE_info:LTR12E,LTR12E_dup46,ERV1,LTR,donor,+,69844126,69844913|None,GTF2H2B|2	chr5:69844913-70420249|13|11.62|0.38|4.93|+|2|TE_info:LTR12E,LTR12E_dup46,ERV1,LTR,donor,+,69844126,69844913|None,GTF2H2B|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2407531738281	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.90465	1	8095	8095		40.573	3.4135	1	1068200			49660	456	33340	33353	56089	56089					0.021228632976999506
RPFAGFEDF	9	Unmodified	_RPFAGFEDF_					0	0	0		ENST00000592222.5_1_19:1115804-1132196:-|nuORF;nc|ENSG00000064932|Q9Y2G9-3|SBNO2;ENSG00000064932|ENST00000361757|SBNO2	ENST00000592222.5_1_19:1115804-1132196:-|nuORF	ENST00000592222.5_1_19:1115804-1132196:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2561645507812	2	543.256174	1084.49779	0.070547	3.8325E-05	-0.50657	-0.0002752	-0.43602	-0.00023687	543.2556909531908	67.358	0.77129	67.743	67.453	68.225	0.38515					38	19	3	0	0	0	0.18601	1	7374	7374		76.774	17.992	1	574750			49661	1113	33341	33354	56090	56090					-0.04107403107900609
RPFLAPRLRSP	11	Unmodified	_RPFLAPRLRSP_					0	0	0		ENSG00000213906|ENST00000533293|LTB4R2	ENSG00000213906|ENST00000533293|LTB4R2	ENSG00000213906|ENST00000533293|LTB4R2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.267578125	3	437.266568	1308.77787	-0.53562	-0.00023421	3.585	0.0015676	3.0494	0.0013334	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.76892	1	4300	4300		17.833	1.3033	1	4132000			49662	8606	33342	33355	56091	56091					0.13583557953529635
RPFMTLPM	8	Unmodified	_RPFMTLPM_					0	0	0		ENSG00000166884|ENST00000300127|OR4D6	ENSG00000166884|ENST00000300127|OR4D6	ENSG00000166884|ENST00000300127|OR4D6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	496.76055908203125	2	496.756441	991.498329	0.41891	0.00020809	-0.8699	-0.00043213	-0.451	-0.00022403	496.7558260453861	58.614	0.1422	58.725	58.604	58.746	0.11027					7	5	2	0	0	0	0.87922	1	4999	4999		31.955	4.0726	1	56396			49663	6240	33343	33356	56092	56092					0.0022397701594627506
RPFMTLPM	8	Unmodified	_RPFMTLPM_					0	0	0		ENSG00000166884|ENST00000300127|OR4D6	ENSG00000166884|ENST00000300127|OR4D6	ENSG00000166884|ENST00000300127|OR4D6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	496.756441	991.498329	-0.62333	-0.00030964	-0.22407	-0.00011131	-0.84739	-0.00042095	496.75664979627464	58.759	0.10213	58.846	58.758	58.86	0.087002	0.060461	0.00036712	NaN	31.955	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67041			49664	6240	33343	33356							0.0022397701594627506
RPFPIKASP	9	Unmodified	_RPFPIKASP_					0	0	0			REV__ENST00000228506.7_1_12:121137802-121138003:+|nuORF	REV__ENST00000228506.7_1_12:121137802-121138003:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.79901123046875	2	506.800552	1011.58655	-0.49867	-0.00025273	1.4784	0.00074926	0.97973	0.00049653	506.80125930962566	45.611	0.78478	45.623	45.395	46.179	0.012058					40	21	2	0	0	0	0.78983	1	3354	3354		27.882	3.6795	1	207840	+		49665	24185	33344	33357	56093	56093					0.08122056922411502
RPFPLRPLNR	10	Unmodified	_RPFPLRPLNR_					0	0	0			REV__ENST00000325954.8_2_12:120972163-120972457:+|nuORF	REV__ENST00000325954.8_2_12:120972163-120972457:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3872680664062	2	633.383106	1264.75166	0.48639	0.00030807	3.0516	0.0019328	3.538	0.0022409	633.3849528535055	51.23	1.8238	51.28	50.541	52.365	0.049896					89	57	2	0	0	0	0.86621	1	4057	4057		14.865	8.1293	1	205950	+		49666	25069	33345	33358	56094	56094					0.12987288782073847
RPFVCNWMYCG	11	2 Carbamidomethyl (C)	_RPFVC(Carbamidomethyl (C))NWMYC(Carbamidomethyl (C))G_	RPFVC(1)NWMYC(1)G		RPFVC(49)NWMYC(49)G		0	2	0		ENST00000465379.1_1_2:174774671-174778005:-|nuORF;nc|ENSG00000172845|Q02447-4|SP3;nc|ENSG00000172845|Q02447-3|SP3;nc|ENSG00000172845|Q02447-5|SP3;nc|ENSG00000172845|Q02447-6|SP3;nc|ENSG00000172845|Q02447-2|SP3;ENSG00000172845|ENST00000310015|SP3	ENST00000465379.1_1_2:174774671-174778005:-|nuORF	ENST00000465379.1_1_2:174774671-174778005:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.2110900878906	3	497.210637	1488.61008	0.28328	0.00014085	0.32873	0.00016345	0.61201	0.0003043	497.2111839117325	29.558	1.118	29.468	28.974	30.092	-0.089544					73	25	5	0	0	0	0.54689	1	1881	1881		48.602	9.8875	1	901140			49667	6801	33346	33359	56095	56095	86;87				-0.11467956689216408
RPFYKEKMNS	10	Unmodified	_RPFYKEKMNS_					0	0	0			REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|34|1|sense	REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|34|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.88848876953125	3	433.888657	1298.64414	-0.57204	-0.0002482	0.79493	0.00034491	0.22288	9.6706E-05	433.88884749146075	31.816	1.1169	31.942	31.3	32.417	0.12643					42	25	2	0	0	0	0.86338	1	2177	2177		31.634	3.9903	1	278180	+		49668	29467	33347	33360	56096	56096					0.006765310656874135
RPGAIKNAS	9	Unmodified	_RPGAIKNAS_					0	0	0			REV__ENSG00000151025|ENST00000376351|GPR158	REV__ENSG00000151025|ENST00000376351|GPR158	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2628479003906	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.7932	1	8225	8225		24.203	0	1	4061400	+		49669	20235	33348	33361	56097	56097					0.05435722848858404
RPGAKAPSRRR	11	Unmodified	_RPGAKAPSRRR_					0	0	0		ENSG00000141664|ENST00000269499|ZCCHC2	ENSG00000141664|ENST00000269499|ZCCHC2	ENSG00000141664|ENST00000269499|ZCCHC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.9219970703125	3	417.921683	1250.74322	2.409	0.0010068	-1.0914	-0.00045614	1.3176	0.00055064	417.9211491012133	105.29	1.9486	105.45	104.96	106.91	0.15584					170	67	4	0	0	0	0.71803	1	12868	12868		28.577	0.49524	1	526200			49670	4522	33349	33362	56098	56098					0.1278773486544651
RPGALAKI	8	Unmodified	_RPGALAKI_					0	0	0		ENST00000544307.1_1_12:20725060-20833202:+|nuORF;ENSG00000172572|ENST00000359062|PDE3A	ENST00000544307.1_1_12:20725060-20833202:+|nuORF	ENST00000544307.1_1_12:20725060-20833202:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.23785400390625	2	413.268887	824.523222	0.86127	0.00035594	-3.975	-0.0016427	-3.1137	-0.0012868	413.2668843903988	77.834	1.3264	78.239	77.895	79.221	0.4053					51	31	3	0	0	0	0.4196	1	8859	8859		18.324	0	1	265130			49671	6777	33350	33363	56099	56099					0.1039411620519104
RPGEVLGLVGT	11	Unmodified	_RPGEVLGLVGT_					0	0	0		ENSG00000164163|ENST00000296577|ABCE1	ENSG00000164163|ENST00000296577|ABCE1	ENSG00000164163|ENST00000296577|ABCE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.3173828125	2	549.319306	1096.62406	-0.48303	-0.00026534	-2.2746	-0.0012495	-2.7576	-0.0015148	549.3179926126767	101.27	2.2263	101.27	100.73	102.96	0					128	54	4	0	0	0	0.75164	1	10282	10282		21.686	1.689	1	1196600			49672	5928	33351	33364	56100	56100					0.0796110339738334
RPGFAIWAPLP	11	Unmodified	_RPGFAIWAPLP_					0	0	0		nc|ENSG00000290618|P0DPF6|CDRT15P3	nc|ENSG00000290618|P0DPF6|CDRT15P3	nc|ENSG00000290618|P0DPF6|CDRT15P3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.8797607421875	2	612.848033	1223.68151	-0.38931	-0.00023859	-0.8925	-0.00054697	-1.2818	-0.00078556	612.8475390861242	104.91	0.20156	104.9	104.78	104.98	-0.014809					6	4	2	0	0	0	0.1753	1	11337	11337		44.117	0	1	172950			49673	15339	33352	33365	56101	56101					0.0786199039357598
RPGGARPP	8	Unmodified	_RPGGARPP_					0	0	0			REV__ENST00000164227.9_1_19:45263103-45263223:+|nuORF	REV__ENST00000164227.9_1_19:45263103-45263223:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.23187255859375	2	404.232836	806.45112	-1.8251	-0.00073778	2.1907	0.00088553	0.3655	0.00014775	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.86791	1	8166	8166		28.254	0	1	3315300	+		49674	24078	33353	33366	56102	56102					0.04015201851461825
RPGGGRVK	8	Unmodified	_RPGGGRVK_					0	0	0		nc|ENSG00000078018|P11137-3|MAP2;ENSG00000078018|ENST00000682079|MAP2;nc|ENSG00000078018|P11137-2|MAP2;nc|ENSG00000078018|P11137-4|MAP2	nc|ENSG00000078018|P11137-3|MAP2;nc|ENSG00000078018|P11137-4|MAP2	nc|ENSG00000078018|P11137-4|MAP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.1942443847656	2	413.753936	825.493319	2.8958	0.0011981	-4.2515	-0.0017591	-1.3558	-0.00056095	413.7527056367796	85.238	0.56703	85.296	85.152	85.719	0.057899					23	12	3	0	0	0	0.4196	1	8672	8672		12.207	0	1	98782			49675	1389;14783	33354	33367	56103	56103					0.07359177259843364
RPGGPRPA	8	Unmodified	_RPGGPRPA_					0	0	0		ENST00000299954.13_1_17:65373938-65374277:+|nuORF	ENST00000299954.13_1_17:65373938-65374277:+|nuORF	ENST00000299954.13_1_17:65373938-65374277:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.2315673828125	2	404.232836	806.45112	-0.39209	-0.00015849	0.40601	0.00016412	0.013927	5.6299E-06	404.23288491550113	84.848	3.8677	85.296	83.349	87.217	0.44736					164	94	4	0	0	0	0.85277	1	9973	9973		25.45	0	1	3295900			49676	9786	33355	33368	56104	56104					0.04015201851461825
RPGHPLVPKRP	11	Unmodified	_RPGHPLVPKRP_					0	0	0		ENST00000593012.1_1_19:2272861-2273104:+|nuORF;ENST00000589739.3_1_19:2272695-2273104:+|nuORF;ENST00000581150.6_1_19:2271753-2273104:+|nuORF;ENSG00000104904|ENST00000602676|OAZ1	ENST00000593012.1_1_19:2272861-2273104:+|nuORF	ENST00000593012.1_1_19:2272861-2273104:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.3837890625	2	627.383106	1252.75166	-0.21854	-0.00013711	-0.73487	-0.00046105	-0.95341	-0.00059816	627.3824987700403	117.62	0.3381	117.55	117.34	117.68	-0.07531					36	11	4	0	0	0	0.63176	1	12618	12618		40.778	2.9666	1	1514200			49677	2167	33356	33369	56105	56105					0.1353928878206716
RPGHRRGHGPR	11	Unmodified	_RPGHRRGHGPR_					0	0	0		ENST00000488863.5_2_3:43020947-43095053:+|nuORF	ENST00000488863.5_2_3:43020947-43095053:+|nuORF	ENST00000488863.5_2_3:43020947-43095053:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3609619140625	2	641.858652	1281.70275	-0.046787	-3.003E-05	2.6302	0.0016882	2.5835	0.0016582	642.3619686544171	113.17	0.33764	113.1	112.9	113.24	-0.067215					42	13	4	0	0	0	0.6921	1	12291	12291		32.812	1.2826	1	78874			49678	12639	33357	33370	56106	56106					0.07316813265674682
RPGHRRGHGPR	11	Unmodified	_RPGHRRGHGPR_					0	0	0		ENST00000488863.5_2_3:43020947-43095053:+|nuORF	ENST00000488863.5_2_3:43020947-43095053:+|nuORF	ENST00000488863.5_2_3:43020947-43095053:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8582153320312	2	641.858652	1281.70275	1.7061	0.001095	-0.18409	-0.00011816	1.522	0.00097688	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.65746	1	12916	12916		37.812	1.3648	1	27133000			49679	12639	33357	33370	56107	56107					0.07316813265674682
RPGKHGRNR	9	Unmodified	_RPGKHGRNR_					0	0	0		ENST00000443524.6_2_11:20385302-20385836:+|nuORF	ENST00000443524.6_2_11:20385302-20385836:+|nuORF	ENST00000443524.6_2_11:20385302-20385836:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.3120727539062	2	539.310472	1076.60639	0.18916	0.00010202	2.2355	0.0012056	2.4247	0.0013077	539.3115859052693	30.049	0.75069	30.074	29.733	30.483	0.025013					40	18	3	0	0	0	0.78058	1	1511	1511		30.504	1.3336	1	283730			49680	11804	33358	33371	56108	56108					0.07115245705722373
RPGKKKKKKK	10	Unmodified	_RPGKKKKKKK_					0	0	0		chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	409.2932434082031	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.954	1	19.02	18.52	19.52	0.066298								0	0	0	0.45132	1	389	389		7.3997	0	1				49681	111	33359	33372	56109	56109					0.2472131174695278
RPGKKKKKKK	10	Unmodified	_RPGKKKKKKK_					0	0	0		chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	409.2914123535156	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.027	1	19.004	18.504	19.504	-0.023342								0	0	0	0.45132	1	387	387		7.3997	0	1				49682	111	33359	33372	56110	56110					0.2472131174695278
RPGKKKKKKK	10	Unmodified	_RPGKKKKKKK_					0	0	0		chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.29217529296875	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.153	1	19.523	19.023	20.023	-0.6296								0	0	0	0.45132	1	614	614		3.8434	0.22435	1				49683	111	33359	33372	56111	56111					0.2472131174695278
RPGKSRIPG	9	Unmodified	_RPGKSRIPG_					0	0	0		ENSG00000188070|ENST00000433688|ZFTA	ENSG00000188070|ENST00000433688|ZFTA	ENSG00000188070|ENST00000433688|ZFTA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2362060546875	2	484.293425	966.572297	-0.55882	-0.00027063	-3.8814	-0.0018798	-4.4403	-0.0021504	484.2914089566006	84.966	0.27299	85.413	85.236	85.509	0.44736					9	6	2	0	0	0	0.20789	1	9928	9928		71.877	19.578	1	77599			49684	7902	33360	33373	56112	56112					0.08767404494142284
RPGLHEKS	8	Unmodified	_RPGLHEKS_					0	0	0		ENST00000402024.2_1_6:116778703-116778877:-|nuORF	ENST00000402024.2_1_6:116778703-116778877:-|nuORF	ENST00000402024.2_1_6:116778703-116778877:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.2560119628906	2	462.256508	922.498464	0.68706	0.0003176	-2.3722	-0.0010966	-1.6851	-0.00077897	462.255277451458	50.161	1.7142	51.006	50.034	51.748	0.84501					77	41	3	0	0	0	0.89962	1	4925	4925		38.806	3.6054	1	1891400			49685	11242	33361	33374	56113	56113					0.03411436331805362
RPGPFPLGLPI	11	Unmodified	_RPGPFPLGLPI_					0	0	0		ENST00000371600.7_1_9:139937867-139938101:-|nuORF	ENST00000371600.7_1_9:139937867-139938101:-|nuORF	ENST00000371600.7_1_9:139937867-139938101:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3567504882812	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.77	1	117.75	117.25	118.25	-0.02433								0	0	0	0.56276	1	13042	13042		19.104	2.6304	1				49686	10667	33362	33375	56114	56114					0.1114287453635825
RPGPGLEDR	9	Unmodified	_RPGPGLEDR_					0	0	0		ENST00000546766.5_1_12:98987913-98988027:+|nuORF	ENST00000546766.5_1_12:98987913-98988027:+|nuORF	ENST00000546766.5_1_12:98987913-98988027:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.7647399902344	2	498.764697	995.514842	0.12667	6.3177E-05	-0.13163	-6.565E-05	-0.00496	-2.4739E-06	498.7644366416421	19.524	0.60889	19.054	18.882	19.491	-0.46967					25	12	3	0	0	0	0.7932	1	538	538		24.519	0.31644	1	114940			49687	13594	33363	33376	56115	56115					0.01690517497888777
RPGPPLVPSL	10	Unmodified	_RPGPPLVPSL_					0	0	0		ENST00000449943.5_1_11:64895819-64896227:-|nuORF	ENST00000449943.5_1_11:64895819-64896227:-|nuORF	ENST00000449943.5_1_11:64895819-64896227:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.8143920898438	2	516.813659	1031.61277	0.036419	1.8822E-05	0.73547	0.0003801	0.77189	0.00039892	516.8140730356591	36.519	1.4394	36.5	35.692	37.132	-0.018677					63	31	4	0	0	0	0.85694	1	2345	2345		21.96	3.6355	1	124480			49688	11884	33364	33377	56116	56116					0.09822326093899392
RPGPSRRAPL	10	Unmodified	_RPGPSRRAPL_					0	0	0			REV__ENST00000533387.5_1_11:134123508-134129738:+|nuORF	REV__ENST00000533387.5_1_11:134123508-134129738:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8299560546875	2	553.830706	1105.64686	0.37109	0.00020552	-1.4521	-0.0008042	-1.081	-0.00059868	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.86587	1	10373	10373		29.17	1.0886	1	1786500	+		49689	28344	33365	33378	56117	56117					0.09826167305504896
RPGPVPARG	9	Unmodified	_RPGPVPARG_					0	0	0			REV__ENSG00000129667|ENST00000675367|RHBDF2	REV__ENSG00000129667|ENST00000675367|RHBDF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.7661437988281	2	453.767043	905.519533	-0.13114	-5.9507E-05	-2.4763	-0.0011237	-2.6075	-0.0011832	453.7659298914551	41.976	1.7233	41.931	41.177	42.9	-0.045471					104	47	4	0	0	0	0.62081	1	2764	2764		45.952	1.4209	1	768160	+		49690	18829	33366	33379	56118	56118					0.06299446431319211
RPGQKFIRIY	10	Unmodified	_RPGQKFIRIY_					0	0	0		ENSG00000141506|ENST00000447110|PIK3R5;ENST00000578515.5_1_17:8785060-8814811:-|nuORF;nc|ENSG00000141506|Q8WYR1-2|PIK3R5	ENSG00000141506|ENST00000447110|PIK3R5	ENSG00000141506|ENST00000447110|PIK3R5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.30267333984375	3	426.587418	1276.74043	-0.14262	-6.084E-05	1.5287	0.00065212	1.3861	0.00059128	426.9224312102864	62.927	0.14899	62.893	62.759	62.908	-0.033714					8	5	2	0	0	0	0.37624	1	5952	5952		26.063	7.5323	1	24867			49691	4507	33367	33380	56119	56119					0.11312466687945744
RPGRDCEV	8	Unmodified	_RPGRDCEV_					0	0	0		ENST00000467699.5_1_17:7604102-7605361:+|nuORF;ENST00000498311.5_1_17:7604102-7606801:+|nuORF;ENSG00000141499|ENST00000396463|WRAP53	ENST00000467699.5_1_17:7604102-7605361:+|nuORF	ENST00000467699.5_1_17:7604102-7605361:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.7073669433594	2	466.224351	930.434149	-0.35999	-0.00016784	3.5177	0.00164	3.1577	0.0014722	466.2258990929245	75.913	1.1442	76.481	75.784	76.929	0.56836					36	27	2	0	0	0	0.4196	1	8687	8687		7.1934	0	1	226870			49692	4506	33368	33381	56120	56120					-0.03385086816660987
RPGRRHRRPR	10	Unmodified	_RPGRRHRRPR_					0	0	0			REV__chr6:114228778-114342195|19|16.58|0.6|4.78|-|1|HS3ST5,HS3ST5|1	REV__chr6:114228778-114342195|19|16.58|0.6|4.78|-|1|HS3ST5,HS3ST5|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.6084289550781	3	448.608321	1342.80313	-0.33073	-0.00014837	2.644	0.0011861	2.3132	0.0010377	448.60926417433876	75.297	1.2081	75.251	74.823	76.031	-0.045982					90	31	4	0	0	0	0.8573	1	7400	7400		16.007	1.9208	1	359860	+		49693	15870	33369	33382	56121	56121					0.14544470319333413
RPGRRHRRPR	10	Unmodified	_RPGRRHRRPR_					0	0	0			REV__chr6:114228778-114342195|19|16.58|0.6|4.78|-|1|HS3ST5,HS3ST5|1	REV__chr6:114228778-114342195|19|16.58|0.6|4.78|-|1|HS3ST5,HS3ST5|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.6089172363281	3	448.608321	1342.80313	-1.309	-0.00058724	3.7217	0.0016696	2.4127	0.0010824	448.60976401690687	76.777	1.1377	76.902	76.414	77.552	0.12485					110	49	3	0	0	0	0.85285	1	7192	7192		16.717	1.3843	1	879130	+		49694	15870	33369	33382	56122	56122					0.14544470319333413
RPGRRKPGP	9	Unmodified	_RPGRRKPGP_					0	0	0			REV__ENST00000483824.5_1_1:40420832-40434017:+|nuORF	REV__ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.813720703125	2	510.812316	1019.61008	0.64006	0.00032695	0.39624	0.00020241	1.0363	0.00052936	510.81232037546175	81.583	0.7857	81.726	81.325	82.111	0.14352					29	17	2	0	0	0	0.78058	1	7820	7820		30.504	12.179	1	171050	+		49695	27500	33370	33383	56123	56123					0.10105915479596206
RPGRRKPGP	9	Unmodified	_RPGRRKPGP_					0	0	0			REV__ENST00000483824.5_1_1:40420832-40434017:+|nuORF	REV__ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.81378173828125	2	510.812316	1019.61008	-0.053582	-2.7371E-05	3.6615	0.0018703	3.6079	0.001843	510.81277149178777	80.826	1.111	81.247	80.721	81.832	0.4215					79	26	4	0	0	0	0.78058	1	9280	9280		30.504	4.9296	1	1491100	+		49696	27500	33370	33383	56124	56124					0.10105915479596206
RPGRRKPGP	9	Unmodified	_RPGRRKPGP_					0	0	0			REV__ENST00000483824.5_1_1:40420832-40434017:+|nuORF	REV__ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	510.812316	1019.61008	-0.37371	-0.0001909	1.6926	0.00086462	1.3189	0.00067372	510.8128793953087	81.566	1.0195	81.711	81.232	82.251	0.14513	0.0063736	0.00024015	NaN	30.504	35	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	196090	+		49697	27500	33370	33383							0.10105915479596206
RPGRRKPGP	9	Unmodified	_RPGRRKPGP_					0	0	0			REV__ENST00000483824.5_1_1:40420832-40434017:+|nuORF	REV__ENST00000483824.5_1_1:40420832-40434017:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	510.812316	1019.61008	0.64006	0.00032695	0.39624	0.00020241	1.0363	0.00052936	510.81232037546175	81.583	0.7857	81.726	81.325	82.111	0.14352	0.021098	-0.0010843	NaN	30.504	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171050	+		49698	27500	33370	33383							0.10105915479596206
RPGSFTLLLRN	11	Unmodified	_RPGSFTLLLRN_					0	0	0		ENSG00000166391|ENST00000198801|MOGAT2;nc|ENSG00000166391|Q3SYC2-3|MOGAT2;nc|ENSG00000166391|Q3SYC2-2|MOGAT2	ENSG00000166391|ENST00000198801|MOGAT2	ENSG00000166391|ENST00000198801|MOGAT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	637.3688354492188	2	637.372404	1272.73025	1.4683	0.00093584	-4.4237	-0.0028195	-2.9554	-0.0018837	637.3694673985003	105.74	2.5255	105.78	104.95	107.48	0.038322					168	59	4	0	0	0	0.75164	1	11601	11601		21.686	1.689	1	1651800			49699	6188	33371	33384	56125	56125					0.10479858962708022
RPGSFTLLLRN	11	Unmodified	_RPGSFTLLLRN_					0	0	0		ENSG00000166391|ENST00000198801|MOGAT2;nc|ENSG00000166391|Q3SYC2-3|MOGAT2;nc|ENSG00000166391|Q3SYC2-2|MOGAT2	ENSG00000166391|ENST00000198801|MOGAT2	ENSG00000166391|ENST00000198801|MOGAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	637.3679809570312	2	637.372404	1272.73025	-1.1676	-0.00074419	-1.729	-0.001102	-2.8965	-0.0018462	637.3712208846088	105.62	2.2472	105.69	104.93	107.17	0.07312					175	54	4	0	0	0	0.75906	1	11160	11160		20.03	2.5625	1	2485300			49700	6188	33371	33384	56126	56126					0.10479858962708022
RPGTMDKY	8	Unmodified	_RPGTMDKY_					0	0	0			REV__nc|ENSG00000171606|Q96GC6-3|ZNF274	REV__nc|ENSG00000171606|Q96GC6-3|ZNF274	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.23614501953125	2	484.236927	966.459301	0.22337	0.00010816	-2.9462	-0.0014267	-2.7229	-0.0013185	484.2359214945001	86.186	1.2292	86.629	86.074	87.303	0.44331					103	29	6	0	0	0	0.79403	1	10069	10069		63.306	5.495	1	37343000	+		49701	21755	33372	33385	56127	56127					-0.025270320140862168
RPGVEQPR	8	Unmodified	_RPGVEQPR_					0	0	0			REV__ENST00000358337.9_1_5:140050841-140051006:+|nuORF	REV__ENST00000358337.9_1_5:140050841-140051006:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.7615051269531	2	469.761958	937.509363	0.18565	8.7212E-05	-0.98189	-0.00046125	-0.79623	-0.00037404	469.76127734615494	35.397	1.4141	35.503	35.2	36.614	0.10604					71	45	2	0	0	0	0.87479	1	1865	1865		30.504	0	1	151100	+		49702	25432	33373	33386	56128	56128					0.03810838706078812
RPHHWPAM	8	Unmodified	_RPHHWPAM_					0	0	0		ENSG00000161381|ENST00000315392|PLXDC1;ENST00000394318.7_1_17:37224095-37235479:-|nuORF;nc|ENSG00000161381|Q8IUK5-4|PLXDC1	ENSG00000161381|ENST00000315392|PLXDC1	ENSG00000161381|ENST00000315392|PLXDC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.6832885742188	2	516.253246	1030.49194	0.44512	0.0002298	0.60527	0.00031247	1.0504	0.00054227	516.2533929637456	28.307	0.4985	28.284	28.115	28.613	-0.023556					16	11	2	0	0	0	0.4196	1	1351	1351		13.775	0.81615	1	32698			49703	5634	33374	33387	56129	56129					-0.022087801005682195
RPHIPISK	8	Unmodified	_RPHIPISK_					0	0	0		ENSG00000154127|ENST00000284273|UBASH3B	ENSG00000154127|ENST00000284273|UBASH3B	ENSG00000154127|ENST00000284273|UBASH3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.95196533203125	2	474.292894	946.571235	-0.21283	-0.00010094	0.20065	9.5169E-05	-0.012177	-5.7753E-06	474.29289964777485	27.41	0.48284	27.234	26.971	27.453	-0.17559					18	10	2	0	0	0	0.4196	1	1548	1548		11.511	0	1	86289			49704	5253	33375	33388	56130	56130					0.09581190125231842
RPHLGLDK	8	Unmodified	_RPHLGLDK_					0	0	0			REV__ENSG00000151240|ENST00000280886|DIP2C	REV__ENSG00000151240|ENST00000280886|DIP2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.2747497558594	2	468.274701	934.534849	0.28311	0.00013258	-0.59176	-0.00027711	-0.30865	-0.00014453	468.2742336304524	17.454	0.4307	16.972	16.761	17.192	-0.48256					22	9	3	0	0	0	0.91472	1	257	257		44.117	1.6423	1	165050	+		49705	20242	33376	33389	56131	56131					0.06496313228512918
RPHLKRSFSII	11	Unmodified	_RPHLKRSFSII_					0	0	0		nc|ENSG00000105520|Q96GM1-2|PLPPR2;ENSG00000105520|ENST00000688289|PLPPR2;nc|ENSG00000105520|Q96GM1|PLPPR2;ENST00000586431.5_1_19:11468337-11470155:+|nuORF	nc|ENSG00000105520|Q96GM1-2|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.277099609375	3	451.941973	1352.80409	0.3266	0.00014761	2.2075	0.00099765	2.5341	0.0011453	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.75457	1	4313	4313		21.032	1.7696	1	721610			49706	2223	33377	33390	56132	56132					0.14179827125030897
RPHPLPGN	8	Unmodified	_RPHPLPGN_					0	0	0		ENST00000220809.8_1_8:42065013-42065229:-|nuORF	ENST00000220809.8_1_8:42065013-42065229:-|nuORF	ENST00000220809.8_1_8:42065013-42065229:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	444.2453308105469	2	444.245944	886.477334	1.4251	0.00063311	-2.0669	-0.00091822	-0.64178	-0.00028511	444.24485409277173	107.1	1.0795	107.21	106.82	107.9	0.10396					105	39	3	0	0	0	0.92973	1	13047	13047		50.025	12.865	1	6005700			49707	9167	33378	33391	56133	56133					0.02955471022949041
RPHPPGDH	8	Unmodified	_RPHPPGDH_					0	0	0		ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7270202636719	2	456.725375	911.436198	-0.16136	-7.3697E-05	4.2106	0.0019231	4.0492	0.0018494	456.72713160093247	76.69	0.8143	77.259	76.89	77.704	0.56835					40	25	2	0	0	0	0.884	1	8713	8713		33.516	1.5607	1	345330			49708	11684	33379	33392	56134	56134					-0.023062900165314204
RPHQGNRR	8	Unmodified	_RPHQGNRR_					0	0	0			REV__ENST00000398484.6_1_4:1019147-1019276:+|nuORF	REV__ENST00000398484.6_1_4:1019147-1019276:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.781982421875	2	510.781548	1019.54854	-0.062615	-3.1982E-05	2.7797	0.0014198	2.7171	0.0013879	510.7827979768825	26.396	0.70906	26.358	26.096	26.805	-0.038523					36	14	3	0	0	0	0.92457	1	1173	1173		47.916	3.3845	1	179820	+		49709	26206	33380	33393	56135	56135					0.039549837803292576
RPHRGLTRTW	10	Unmodified	_RPHRGLTRTW_					0	0	0			REV__ENST00000518357.1_1_5:169758569-169760446:+|nuORF	REV__ENST00000518357.1_1_5:169758569-169760446:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3590087890625	2	640.360162	1278.70577	-0.024279	-1.5547E-05	-1.8187	-0.0011646	-1.843	-0.0011802	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.86272	1	10220	10220		24.519	0	1	448130	+		49710	28062	33381	33394	56136	56136					0.07756643599850577
RPHRGLTRTW	10	Unmodified	_RPHRGLTRTW_					0	0	0			REV__ENST00000518357.1_1_5:169758569-169760446:+|nuORF	REV__ENST00000518357.1_1_5:169758569-169760446:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3602294921875	2	640.360162	1278.70577	1.5776	0.0010102	-3.6587	-0.0023429	-2.0811	-0.0013326	640.3576428069522	98.956	2.793	99.317	98.237	101.03	0.36136					173	69	3	0	0	0	0.77314	1	12014	12014		40.778	4.3314	1	1011800	+		49711	28062	33381	33394	56137	56137					0.07756643599850577
RPHWLHAM	8	Unmodified	_RPHWLHAM_					0	0	0			REV__ENST00000436817.5_1_10:71075549-71075729:+|nuORF	REV__ENST00000436817.5_1_10:71075549-71075729:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.32373046875	2	524.268896	1046.52324	-0.54779	-0.00028719	1.4099	0.00073916	0.86211	0.00045198	524.2694061585399	30.529	0.62013	30.557	30.274	30.894	0.028618					29	13	3	0	0	0	0.4196	1	1977	1977		31.579	8.5364	1	293930	+		49712	26696	33382	33395	56138	56138					0.0018379293353518733
RPIEDDQEVY	10	Unmodified	_RPIEDDQEVY_					0	0	0		nc|ENSG00000082074|O15117|FYB1;ENSG00000082074|ENST00000512982|FYB1;nc|ENSG00000082074|O15117-3|FYB1	nc|ENSG00000082074|O15117|FYB1	nc|ENSG00000082074|O15117|FYB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	632.2966918945312	2	632.296224	1262.5779	-0.56543	-0.00035752	-0.28241	-0.00017857	-0.84784	-0.00053609	632.2958510679606	41.518	0.51321	42.152	41.917	42.43	0.6339					37	13	4	0	0	0	0.47091	1	3653	3653		58.23	8.6939	1	1635500			49713	1478	33383	33396	56139	56139					-0.042890062953802044
RPIEDDQEVY	10	Unmodified	_RPIEDDQEVY_					0	0	0		nc|ENSG00000082074|O15117|FYB1;ENSG00000082074|ENST00000512982|FYB1;nc|ENSG00000082074|O15117-3|FYB1	nc|ENSG00000082074|O15117|FYB1	nc|ENSG00000082074|O15117|FYB1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	632.296224	1262.5779	-1.9287	-0.0012195	0.41542	0.00026267	-1.5133	-0.00095687	632.2963856452154	41.662	0.60468	42.075	41.823	42.427	0.4139	-0.038077	0.00036596	NaN	58.23	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1264800			49714	1478	33383	33396							-0.042890062953802044
RPIFIITEY	9	Unmodified	_RPIFIITEY_					0	0	0		ENST00000478995.1_1_X:100611030-100611776:-|nuORF;ENSG00000010671|ENST00000308731|BTK;nc|ENSG00000010671|Q06187-2|BTK	ENST00000478995.1_1_X:100611030-100611776:-|nuORF	ENST00000478995.1_1_X:100611030-100611776:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3276977539062	2	576.326599	1150.63865	-1.6952	-0.00097698	1.8991	0.0010945	0.20394	0.00011753	576.3275122271687	72.765	0.74078	73.151	72.834	73.575	0.38581					51	17	4	0	0	0	0.21969	3	8131	8131;8142;8155		71.877	29.013	1	1041800			49715	771	33384	33397	56140;56141;56142	56140					0.06935175545504535
RPIFIITEY	9	Unmodified	_RPIFIITEY_					0	0	0		ENST00000478995.1_1_X:100611030-100611776:-|nuORF;ENSG00000010671|ENST00000308731|BTK;nc|ENSG00000010671|Q06187-2|BTK	ENST00000478995.1_1_X:100611030-100611776:-|nuORF	ENST00000478995.1_1_X:100611030-100611776:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3268432617188	2	576.326599	1150.63865	-0.43356	-0.00024987	0.41939	0.00024171	-0.014164	-8.1631E-06	576.3267440955658	72.572	0.78255	73.126	72.818	73.6	0.55386					50	18	4	0	0	0	0.11055	3	8146	8146;8158;8171		90.37	23.941	1	1181100			49716	771	33384	33397	56143;56144;56145	56143					0.06935175545504535
RPIFRFVQ	8	Unmodified	_RPIFRFVQ_					0	0	0		ENST00000443945.6_1_13:47127426-47279607:+|nuORF	ENST00000443945.6_1_13:47127426-47279607:+|nuORF	ENST00000443945.6_1_13:47127426-47279607:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8163452148438	2	531.813993	1061.61343	2.2467	0.0011948	3.6483	0.0019402	5.895	0.003135	531.815856548035	100.88	1.2769	101.22	100.19	101.46	0.34591					70	31	4	0	0	0	0.91005	1	12290	12290		42.474	1.6963	1	649570			49717	11809	33385	33398	56146	56146					0.08509165533587293
RPIGKSNIF	9	Unmodified	_RPIGKSNIF_					0	0	0			REV__nc|ENSG00000143479|O43781-2|DYRK3	REV__nc|ENSG00000143479|O43781-2|DYRK3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3014526367188	2	516.303458	1030.59236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.685	1	62.685	62.185	63.185	0								0	0	0	0.28009	1	5481	5481		39.253	6.4404	1		+		49718	19814	33386	33399	56147	56147					0.07829155434069435
RPIGLTWVLQ	10	Unmodified	_RPIGLTWVLQ_					0	0	0		chr19:12829997-12834785|57|44.88|0.41|6.78|-|ENST00000591512|RTBDN,RTBDN;chr19:12828935-12829811|43|11.79|0.4|4.87|-|ENST00000591512|RTBDN,RTBDN;chr19:12829028-12829811|50|24.26|0.57|5.41|-|ENST00000587549|RTBDN,RTBDN;chr19:12834846-12835083|54|35.0|0.21|7.41|-|ENST00000589272|RTBDN,RTBDN;chr19:12826666-12826775|44|10.75|0.14|6.27|-|ENST00000589272|RTBDN,RTBDN;ENSG00000132026|ENST00000674343|RTBDN;nc|ENSG00000132026|Q9BSG5-3|RTBDN;nc|ENSG00000132026|Q9BSG5-2|RTBDN	chr19:12829997-12834785|57|44.88|0.41|6.78|-|ENST00000591512|RTBDN,RTBDN	chr19:12829997-12834785|57|44.88|0.41|6.78|-|ENST00000591512|RTBDN,RTBDN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.8534545898438	2	591.853316	1181.69208	-1.1163	-0.00066066	0.52388	0.00031006	-0.59237	-0.0003506	591.8535674862683	60.822	0.56529	61.212	60.859	61.424	0.38945					41	15	3	0	0	0	0.23224	1	6443	6443		80.455	11.608	1	1472700			49719	264	33387	33400	56148	56148					0.10849973048016182
RPIKPSRSEIN	11	Unmodified	_RPIKPSRSEIN_					0	0	0		nc|ENSG00000168918|Q92835-2|INPP5D;ENSG00000168918|ENST00000445964|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D	nc|ENSG00000168918|Q92835-2|INPP5D	nc|ENSG00000168918|Q92835-2|INPP5D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.8709716796875	2	648.872768	1295.73098	0.93376	0.00060589	-2.8267	-0.0018342	-1.8929	-0.0012283	648.8712589757642	99.284	2.1869	99.441	98.679	100.87	0.15659					107	50	3	0	0	0	0.67778	1	10378	10378		35.152	2.4015	1	221690			49720	6451	33388	33401	56149	56149					0.09494653611773174
RPIKPSRSEIN	11	Unmodified	_RPIKPSRSEIN_					0	0	0		nc|ENSG00000168918|Q92835-2|INPP5D;ENSG00000168918|ENST00000445964|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D	nc|ENSG00000168918|Q92835-2|INPP5D	nc|ENSG00000168918|Q92835-2|INPP5D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.8714599609375	2	648.872768	1295.73098	-1.1412	-0.00074051	-0.8065	-0.00052332	-1.9477	-0.0012638	648.8725280227517	99.334	2.2334	99.52	98.635	100.87	0.18582					120	51	3	0	0	0	0.61369	1	10301	10301		42.864	1.4377	1	245270			49721	6451	33388	33401	56150	56150					0.09494653611773174
RPILFLPLGLA	11	Unmodified	_RPILFLPLGLA_					0	0	0		nc|ENSG00000052344|Q16651-2|PRSS8;ENSG00000052344|ENST00000317508|PRSS8	nc|ENSG00000052344|Q16651-2|PRSS8	nc|ENSG00000052344|Q16651-2|PRSS8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9292297363281	3	403.928781	1208.76451	2.3249	0.0009391	-0.14576	-5.8878E-05	2.1792	0.00088023	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.80593	1	3946	3946		10.104	0.45776	1	2948200			49722	1003	33389	33402	56151	56151					0.1684830712160874
RPILGLLRPS	10	Unmodified	_RPILGLLRPS_					0	0	0			REV__ENST00000532315.1_1_11:121975901-121976138:-|nuORF	REV__ENST00000532315.1_1_11:121975901-121976138:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.86279296875	2	561.361308	1120.70806	0.30908	0.00017351	4.2223	0.0023703	4.5314	0.0025438	561.3635562364497	45.873	0.93881	45.889	45.484	46.422	0.015514					44	26	2	0	0	0	0.86763	1	3355	3355		26.693	0	1	119450	+		49723	28321	33390	33403	56152	56152					0.1525367928495598
RPIPRSTY	8	Unmodified	_RPIPRSTY_					0	0	0		nc|ENSG00000170264|Q3B820-2|FAM161A;nc|ENSG00000170264|Q3B820|FAM161A;ENSG00000170264|ENST00000404929|FAM161A	nc|ENSG00000170264|Q3B820-2|FAM161A	nc|ENSG00000170264|Q3B820-2|FAM161A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7801513671875	2	495.279983	988.545414	0.66564	0.00032968	3.0747	0.0015228	3.7403	0.0018525	495.2814861733272	86.39	5.0943	86.539	83.188	88.282	0.14902					177	118	2	0	0	0	0.4196	1	8483	8483		53.351	21.397	1	279230			49724	6571	33391	33404	56153	56153					0.05068295882927032
RPIQNTRVPND	11	Unmodified	_RPIQNTRVPND_					0	0	0			REV__ENSG00000101337|ENST00000398022|TM9SF4	REV__ENSG00000101337|ENST00000398022|TM9SF4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.265869140625	3	437.237225	1308.68985	-1.0619	-0.0004643	0.30388	0.00013287	-0.75801	-0.00033143	437.5704219438956	29.074	0.17362	29.045	28.954	29.127	-0.029207					5	3	2	0	0	0	0.1745	1	1799	1799		5.4129	0	1	10619	+		49725	17269	33392	33405	56154	56154					0.04784892572274657
RPISKLPG	8	Unmodified	_RPISKLPG_					0	0	0		ENST00000262519.13_2_16:30969107-30970039:+|nuORF	ENST00000262519.13_2_16:30969107-30970039:+|nuORF	ENST00000262519.13_2_16:30969107-30970039:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.2732849121094	2	434.27417	866.533787	0.35944	0.0001561	-1.798	-0.00078083	-1.4386	-0.00062473	434.2731472035985	82.213	1.3748	82.686	82.162	83.537	0.47383					62	33	3	0	0	0	0.89962	1	9523	9523		38.806	6.8513	1	1384700			49726	9442	33393	33406	56155	56155					0.09518098859609836
RPISKSLSI	9	Unmodified	_RPISKSLSI_					0	0	0		ENST00000547657.1_1_21:37741970-37758388:+|nuORF	ENST00000547657.1_1_21:37741970-37758388:+|nuORF	ENST00000547657.1_1_21:37741970-37758388:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.7864074707031	2	500.811116	999.60768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.951	1	16.872	16.372	17.372	-0.079056								0	0	0	0.29475	1	170	170		32.812	6.0163	1				49727	13611	33394	33407	56156	56156					0.10786022231286552
RPISQQSGAI	10	Unmodified	_RPISQQSGAI_					0	0	0		nc|ENSG00000137936|O75815-3|BCAR3;ENSG00000137936|ENST00000260502|BCAR3	nc|ENSG00000137936|O75815-3|BCAR3	nc|ENSG00000137936|O75815-3|BCAR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.7929077148438	2	528.793455	1055.57236	0.24716	0.0001307	-0.27032	-0.00014294	-0.023164	-1.2249E-05	528.7931728625157	35.978	0.73717	36.081	35.817	36.554	0.10306					58	23	4	0	0	0	0.60985	1	1974	1974		49.536	1.5765	1	664310			49728	4245	33395	33408	56157	56157					0.046793597034593404
RPISQQSGAI	10	Unmodified	_RPISQQSGAI_					0	0	0		nc|ENSG00000137936|O75815-3|BCAR3;ENSG00000137936|ENST00000260502|BCAR3	nc|ENSG00000137936|O75815-3|BCAR3	nc|ENSG00000137936|O75815-3|BCAR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7935791015625	2	528.793455	1055.57236	1.0935	0.00057822	-1.1708	-0.00061909	-0.077289	-4.087E-05	528.7928379036528	35.778	2.2829	36.025	35.438	37.721	0.24769					158	56	6	0	0	0	0.099622	1	2774	2774		101.25	2.6706	1	16698000			49729	4245	33395	33408	56158	56158					0.046793597034593404
RPITLRKVAVG	11	Unmodified	_RPITLRKVAVG_					0	0	0		ENST00000596318.1_1_19:49553653-49553959:-|nuORF	ENST00000596318.1_1_19:49553653-49553959:-|nuORF	ENST00000596318.1_1_19:49553653-49553959:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.93017578125	3	403.931185	1208.77173	-1.8895	-0.00076324	-2.2243	-0.00089846	-4.1138	-0.0016617	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.7896	1	3605	3605		13.508	2.9211	1	2300300			49730	14333	33396	33409	56159	56159					0.17569039722025082
RPITLRKVAVG	11	Unmodified	_RPITLRKVAVG_					0	0	0		ENST00000596318.1_1_19:49553653-49553959:-|nuORF	ENST00000596318.1_1_19:49553653-49553959:-|nuORF	ENST00000596318.1_1_19:49553653-49553959:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9295349121094	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.187	1	48.094	47.594	48.594	-0.093178								0	0	0	0.56276	1	3654	3654		21.032	10.445	1				49731	14333	33396	33409	56160	56160					0.17569039722025082
RPITLRKVAVG	11	Unmodified	_RPITLRKVAVG_					0	0	0		ENST00000596318.1_1_19:49553653-49553959:-|nuORF	ENST00000596318.1_1_19:49553653-49553959:-|nuORF	ENST00000596318.1_1_19:49553653-49553959:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92926025390625	3	403.931185	1208.77173	-1.067	-0.00043099	-3.6376	-0.0014693	-4.7046	-0.0019003	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.76699	1	4208	4208		16.53	0.6092	1	5907700			49732	14333	33396	33409	56161	56161					0.17569039722025082
RPIVNRGVVTP	11	Unmodified	_RPIVNRGVVTP_					0	0	0			REV__nc|ENSG00000115421|Q9BWT3-2|PAPOLG	REV__nc|ENSG00000115421|Q9BWT3-2|PAPOLG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2469787597656	3	403.247173	1206.71969	-0.18602	-7.5014E-05	-0.48244	-0.00019454	-0.66847	-0.00026956	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.76699	1	11308	11308		16.53	0	1	12308000	+		49733	18119	33397	33410	56162	56162					0.12459876308275852
RPKGLAAL	8	Unmodified	_RPKGLAAL_					0	0	0			REV__ENST00000354989.9_1_20:25206534-25206930:+|nuORF	REV__ENST00000354989.9_1_20:25206534-25206930:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.26861572265625	2	413.268887	824.523222	-0.14251	-5.8895E-05	-1.1765	-0.00048621	-1.319	-0.0005451	413.26825932473713	73.168	1.1748	73.556	72.836	74.011	0.38779					38	30	2	0	0	0	0.86288	1	8180	8180		26.796	0	1	804440	+		49734	25367	33398	33411	56163	56163					0.10394116205168302
RPKHPIKH	8	Unmodified	_RPKHPIKH_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8102111816406	2	506.811785	1011.60902	-0.16631	-8.4286E-05	-0.19167	-9.7139E-05	-0.35797	-0.00018143	506.8116844121366	15.736	0.19165	15.656	15.553	15.745	-0.080017					15	8	3	0	0	0	0.90465	1	50	50		40.573	2.7611	1	45705		+	49735	581	33399	33412	56164	56164					0.10367701110692451
RPKKAPPPPAY	11	Unmodified	_RPKKAPPPPAY_					0	0	0			REV__nc|ENSG00000119772|Q9Y6K1-2|DNMT3A	REV__nc|ENSG00000119772|Q9Y6K1-2|DNMT3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	407.9098815917969	3	407.908269	1220.70298	0.012695	5.1784E-06	4.0918	0.0016691	4.1045	0.0016743	407.9095955072934	16.101	0.19026	16.16	15.996	16.187	0.059269					11	8	2	0	0	0	0.72228	1	105	105		18.531	0	1	52335	+		49736	15754	33400	33413	56165	56165					0.10145375422325742
RPKKDWIIFLY	11	Unmodified	_RPKKDWIIFLY_					0	0	0			REV__ENSG00000151012|ENST00000280612|SLC7A11	REV__ENSG00000151012|ENST00000280612|SLC7A11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.95611572265625	3	493.622128	1477.84456	-1.8007	-0.00088885	-0.44364	-0.00021899	-2.2443	-0.0011078	493.6218802691259	31.167	0.9176	31.167	30.72	31.638	0					75	31	3	0	0	0	0.78391	1	1465	1465		14.694	2.487	1	50794	+		49737	20232	33401	33414	56166	56166					0.12474748724798701
RPKKEQKQPI	10	Unmodified	_RPKKEQKQPI_					0	0	0			REV__nc|ENSG00000225830|P0DP91|ERCC6;REV__ENSG00000225830|ENST00000355832|ERCC6	REV__nc|ENSG00000225830|P0DP91|ERCC6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.92230224609375	3	417.922578	1250.7459	2.409	0.0010068	-3.2333	-0.0013513	-0.82426	-0.00034448	417.9211491012133	105.29	1.9486	105.45	104.96	106.91	0.15584					170	67	4	0	0	0	0.85633	1	12833	12833		21.686	2.4231	1	526200	+		49738	30209;23740	33402	33415	56167	56167					0.13056145479754377
RPKKKDSA	8	Unmodified	_RPKKKDSA_					0	0	0		ENST00000543462.1_1_11:64004599-64005846:+|nuORF;nc|ENSG00000173511|P49765-2|VEGFB;chr11:64235500-64237187|41|17.76|0.63|4.81|+|1|VEGFB,VEGFB|2;ENSG00000173511|ENST00000309422|VEGFB	ENST00000543462.1_1_11:64004599-64005846:+|nuORF	ENST00000543462.1_1_11:64004599-64005846:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.2799072265625	2	465.279983	928.545414	1.2805	0.00059581	-1.2104	-0.00056316	0.070176	3.2652E-05	465.27931677409214	88.976	2.3969	88.903	88.477	90.874	-0.07238					118	56	4	0	0	0	0.87922	1	9293	9293		31.955	5.1588	1	1648000			49739	13553	33403	33416	56168	56168					0.07828295882939074
RPKKKLME	8	Unmodified	_RPKKKLME_					0	0	0			REV__ENSG00000124688|ENST00000372171|MAD2L1BP	REV__ENSG00000124688|ENST00000372171|MAD2L1BP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3154296875	2	515.315512	1028.61647	0.58613	0.00030204	1.0873	0.00056033	1.6735	0.00086237	515.3156734656603	22.644	1.1835	22.034	21.745	22.928	-0.6107					52	28	3	0	0	0	0.86288	1	960	960		26.796	1.222	1	271940	+		49740	18604	33404	33417	56169	56169					0.10330672596091972
RPKKLGMVF	9	Unmodified	_RPKKLGMVF_					0	0	0			REV__ENSG00000157856|ENST00000288710|DRC1	REV__ENSG00000157856|ENST00000288710|DRC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3262329101562	2	538.325879	1074.63721	1.3454	0.00072427	0.53716	0.00028916	1.8826	0.0010134	538.3260218082069	100.6	2.6544	100.9	100.26	102.91	0.2999					222	70	6	0	0	0	0.7932	1	12351	12351		24.203	2.2429	1	18713000	+		49741	20570	33405	33418	56170	56170					0.10287262975793965
RPKKLIGKKPL	11	Unmodified	_RPKKLIGKKPL_					0	0	0			REV__ENSG00000163545|ENST00000367157|NUAK2	REV__ENSG00000163545|ENST00000367157|NUAK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3031311035156	3	426.630847	1276.87071	0.01204	5.1366E-06	0.41664	0.00017775	0.42868	0.00018289	426.9654549219424	79.876	1.4839	80.292	79.359	80.843	0.41621					45	34	2	0	0	0	0.17863	1	9153	9153		9.6461	0	1	140480	+		49742	20932	33406	33419	56171	56171					0.24335062686941455
RPKKNLKLDIE	11	Unmodified	_RPKKNLKLDIE_					0	0	0			REV__nc|ENSG00000163875|Q9HAF1-3|MEAF6	REV__nc|ENSG00000163875|Q9HAF1-3|MEAF6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9433898925781	3	451.945271	1352.81398	-1.6541	-0.00074756	-2.5453	-0.0011503	-4.1994	-0.0018979	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.76579	1	4764	4764		18.531	3.8374	1	430100	+		49743	29987	33407	33420	56172	56172					0.15168970339732368
RPKLGLFSFV	10	Unmodified	_RPKLGLFSFV_					0	0	0			REV__ENSG00000198478|ENST00000369838|SH3BGRL2	REV__ENSG00000198478|ENST00000369838|SH3BGRL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353271484375	2	582.350409	1162.68626	3.1803	0.0018521	1.9439	0.001132	5.1242	0.0029841	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.8608	1	11634	11634		34.173	7.4796	1	77008000	+		49744	23331	33408	33421	56173	56173					0.1114287453635825
RPKLIARPKS	10	Unmodified	_RPKLIARPKS_					0	0	0			REV__nc|ENSG00000156475|Q00005-6|PPP2R2B	REV__nc|ENSG00000156475|Q00005-6|PPP2R2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.3764038085938	2	583.380032	1164.74551	-1.1894	-0.00069389	-4.43	-0.0025844	-5.6195	-0.0032783	583.3771702968781	45.008	2.1187	45.004	44.165	46.284	-0.0041618					113	49	3	0	0	0	0.85251	1	3548	3548		19.997	2.6318	1	1120500	+		49745	20490	33409	33422	56174	56174					0.16972770550546556
RPKPEARPR	9	Unmodified	_RPKPEARPR_					0	0	0		nc|ENSG00000063176|Q9NRA0-4|SPHK2;nc|ENSG00000063176|Q9NRA0-2|SPHK2;ENSG00000063176|ENST00000245222|SPHK2;nc|ENSG00000063176|Q9NRA0-5|SPHK2;nc|ENSG00000063176|Q9NRA0-3|SPHK2	nc|ENSG00000063176|Q9NRA0-4|SPHK2	nc|ENSG00000063176|Q9NRA0-4|SPHK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8297729492188	2	553.830706	1105.64686	2.0416	0.0011307	-3.0404	-0.0016839	-0.99881	-0.00055317	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.7932	1	9397	9397		19.997	1.6724	1	5457600			49746	1088	33410	33423	56175	56175					0.09826167305504896
RPKPNLSRAGK	11	Unmodified	_RPKPNLSRAGK_					0	0	0		nc|ENSG00000145734|A6H8Y1-7|BDP1;nc|ENSG00000145734|A6H8Y1-6|BDP1;ENSG00000145734|ENST00000358731|BDP1;nc|ENSG00000145734|A6H8Y1-2|BDP1;ENST00000508917.6_1_5:70751704-70841064:+|nuORF;nc|ENSG00000145734|A6H8Y1-5|BDP1;ENST00000508157.3_1_5:70790975-70807035:+|nuORF;nc|ENSG00000145734|A6H8Y1-4|BDP1;nc|ENSG00000145734|A6H8Y1-3|BDP1	nc|ENSG00000145734|A6H8Y1-7|BDP1	nc|ENSG00000145734|A6H8Y1-7|BDP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.5840759277344	3	408.582556	1222.72584	2.2344	0.00091292	1.4524	0.00059343	3.6868	0.0015064	408.5830630400909	25.152	1.0818	24.721	24.272	25.354	-0.4311					47	24	3	0	0	0	0.72892	1	1273	1273		26.75	1.6237	1	326890			49747	4789	33411	33424	56176	56176					0.12338394539779074
RPKRIRRPKID	11	Unmodified	_RPKRIRRPKID_					0	0	0			REV__ENSG00000108349|ENST00000264645|CASC3;REV__ENST00000418132.7_1_17:38296747-38323177:+|nuORF	REV__ENSG00000108349|ENST00000264645|CASC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3086242675781	3	478.975788	1433.90553	-0.90277	-0.0004324	-1.6609	-0.00079555	-2.5637	-0.001228	478.97487033218596	49.369	1.842	49.394	48.497	50.339	0.025578					115	47	3	0	0	0	0.76892	1	3713	3713		17.833	0.6664	1	238510	+		49748	17703;26453	33412	33425	56177	56177					0.2059369854760007
RPKRIRRPKID	11	Unmodified	_RPKRIRRPKID_					0	0	0			REV__ENSG00000108349|ENST00000264645|CASC3;REV__ENST00000418132.7_1_17:38296747-38323177:+|nuORF	REV__ENSG00000108349|ENST00000264645|CASC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3094482421875	3	478.975788	1433.90553	0.34157	0.0001636	-2.911	-0.0013943	-2.5694	-0.0012307	478.9743151753571	51.804	1.1678	51.863	51.373	52.541	0.059719					70	37	2	0	0	0	0.79224	1	4170	4170		12.957	4.9231	1	347520	+		49749	17703;26453	33412	33425	56178	56178					0.2059369854760007
RPKRIRRPKID	11	Unmodified	_RPKRIRRPKID_					0	0	0			REV__ENSG00000108349|ENST00000264645|CASC3;REV__ENST00000418132.7_1_17:38296747-38323177:+|nuORF	REV__ENSG00000108349|ENST00000264645|CASC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97430419921875	3	478.975788	1433.90553	-0.20548	-9.8418E-05	-2.506	-0.0012003	-2.7115	-0.0012987	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.85439	1	3326	3326		5.6988	0	1	468190	+		49750	17703;26453	33412	33425	56179	56179					0.2059369854760007
RPKRRVQASKN	11	Unmodified	_RPKRRVQASKN_					0	0	0		nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-4|SVIL;nc|ENSG00000197321|O95425-3|SVIL;ENSG00000197321|ENST00000355867|SVIL	nc|ENSG00000197321|O95425-2|SVIL	nc|ENSG00000197321|O95425-2|SVIL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	447.2729797363281	3	447.272493	1338.79565	-0.14506	-6.4881E-05	1.1076	0.00049539	0.96252	0.00043051	447.27291009171284	107.35	0.75623	107.31	106.86	107.62	-0.034401					76	17	5	0	0	0	0.75121	1	11668	11668		21.78	3.9473	1	9872200			49751	8152	33413	33426	56180	56180					0.1398027320840356
RPKRRVQASKN	11	Unmodified	_RPKRRVQASKN_					0	0	0		nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-4|SVIL;nc|ENSG00000197321|O95425-3|SVIL;ENSG00000197321|ENST00000355867|SVIL	nc|ENSG00000197321|O95425-2|SVIL	nc|ENSG00000197321|O95425-2|SVIL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.27349853515625	3	447.272493	1338.79565	-1.2893	-0.00057667	1.9554	0.00087461	0.66613	0.00029794	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.76579	1	11408	11408		18.531	0.69791	1	31263000			49752	8152	33413	33426	56181	56181					0.1398027320840356
RPKRRVQASKN	11	Unmodified	_RPKRRVQASKN_					0	0	0		nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-4|SVIL;nc|ENSG00000197321|O95425-3|SVIL;ENSG00000197321|ENST00000355867|SVIL	nc|ENSG00000197321|O95425-2|SVIL	nc|ENSG00000197321|O95425-2|SVIL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.2728576660156	3	447.272493	1338.79565	0.74994	0.00033543	0.056335	2.5197E-05	0.80627	0.00036062	447.27246467576646	106.88	1.1653	106.97	106.51	107.68	0.091255					134	27	6	0	0	0	0.74771	2	11446	11424;11446		22.562	4.0305	1	19906000			49753	8152	33413	33426	56182;56183	56183					0.1398027320840356
RPKSPLGP	8	Unmodified	_RPKSPLGP_					0	0	0			REV__ENST00000375604.6_1_13:113656065-113656206:+|nuORF	REV__ENST00000375604.6_1_13:113656065-113656206:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2576599121094	2	426.25852	850.502486	1.3789	0.00058776	-4.4892	-0.0019136	-3.1103	-0.0013258	426.25665824174644	34.41	1.453	34.715	33.953	35.406	0.30494					83	35	4	0	0	0	0.89962	1	2560	2560		38.806	3.6054	1	1776900	+		49754	25816	33414	33427	56184	56184					0.07125525825517798
RPKTQGTDLKT	11	Unmodified	_RPKTQGTDLKT_					0	0	0		nc|ENSG00000146147|Q5VWP3-2|MLIP;nc|ENSG00000146147|Q5VWP3-1|MLIP;nc|ENSG00000146147|Q5VWP3-4|MLIP;ENST00000511744.1_1_6:53976250-54068425:+|nuORF;ENSG00000146147|ENST00000502396|MLIP	nc|ENSG00000146147|Q5VWP3-2|MLIP	nc|ENSG00000146147|Q5VWP3-2|MLIP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	622.8567504882812	2	622.851501	1243.68845	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.234	1	17.279	16.779	17.779	0.0457								0	0	0	0.56276	1	235	235		31.634	2.4642	1				49755	4823	33415	33428	56185	56185					0.0763525848349218
RPKTRPNKIL	10	Unmodified	_RPKTRPNKIL_					0	0	0			REV__ENST00000504208.5_1_5:136964069-137033992:-|nuORF	REV__ENST00000504208.5_1_5:136964069-137033992:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.93353271484375	3	408.262935	1221.76697	0.46082	0.00018814	-2.0674	-0.00084404	-1.6066	-0.0006559	408.26199996174535	16.412	0.30241	16.388	16.248	16.55	-0.024035					19	13	2	0	0	0	0.37624	1	133	133		33.922	22.286	1	118930	+		49756	19982	33416	33429	56186	56186					0.1649615557926154
RPKVKHIL	8	Unmodified	_RPKVKHIL_					0	0	0		ENSG00000278505|ENST00000615133|C17orf78;nc|nan|Q8N4C9-2|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	ENSG00000278505|ENST00000615133|C17orf78	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2597351074219	2	495.832186	989.649819	1.2578	0.00062365	4.3506	0.0021572	5.6084	0.0027808	495.83424668662605	36.035	1.013	36.476	35.732	36.745	0.44043					54	25	3	0	0	0	0.4196	1	2741	2741		3.9852	0	1	387160			49757	9030	33417	33430	56187	56187					0.15458042430316254
RPKVVIQAQKE	11	Unmodified	_RPKVVIQAQKE_					0	0	0			REV__ENST00000592333.1_1_17:42759339-42767103:-|nuORF	REV__ENST00000592333.1_1_17:42759339-42767103:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.390380859375	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.78986	1	12889	12889		13.454	0	1	2297700	+		49758	22389	33418	33431	56188	56188					0.13652414651187428
RPLAVPLKS	9	Unmodified	_RPLAVPLKS_					0	0	0			REV__ENST00000545732.1_1_12:6623431-6623638:+|nuORF	REV__ENST00000545732.1_1_12:6623431-6623638:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.8155212402344	2	490.816202	979.617851	-1.2705	-0.00062356	0.042852	2.1032E-05	-1.2276	-0.00060253	490.81600949101437	73.142	0.55334	73.53	73.209	73.762	0.38779					31	13	3	0	0	0	0.78983	1	8205	8205		27.882	1.0861	1	875640	+		49759	28531	33419	33432	56189	56189					0.1272262995652227
RPLELVRGIV	10	Unmodified	_RPLELVRGIV_					0	0	0			REV__nc|ENSG00000163629|Q12923-2|PTPN13	REV__nc|ENSG00000163629|Q12923-2|PTPN13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3692016601562	2	576.36659	1150.71863	0.10953	6.313E-05	4.4437	0.0025612	4.5532	0.0026243	576.3689741250236	46.486	1.2914	46.407	45.799	47.091	-0.079006					89	36	3	0	0	0	0.8505	1	3345	3345		19.104	4.2386	1	317790	+		49760	20947	33420	33433	56190	56190					0.14929661939368088
RPLERHVR	8	Unmodified	_RPLERHVR_					0	0	0			REV__ENST00000541961.5_1_11:66259062-66259225:+|nuORF	REV__ENST00000541961.5_1_11:66259062-66259225:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8169555664062	2	531.817599	1061.62064	0.83378	0.00044342	-1.8179	-0.00096678	-0.98411	-0.00052337	531.816483115085	101.13	0.87817	101.27	100.89	101.77	0.14352					39	21	3	0	0	0	0.84579	1	10612	10612		24.519	1.4767	1	446230	+		49761	28491	33421	33434	56191	56191					0.09229898134026371
RPLERHVR	8	Unmodified	_RPLERHVR_					0	0	0			REV__ENST00000541961.5_1_11:66259062-66259225:+|nuORF	REV__ENST00000541961.5_1_11:66259062-66259225:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8173217773438	2	531.817599	1061.62064	2.2466	0.0011948	-3.131	-0.0016651	-0.88431	-0.00047029	531.815856548035	100.88	1.2769	101.22	100.19	101.46	0.34591					70	31	4	0	0	0	0.87479	1	12267	12267		30.504	0	1	649570	+		49762	28491	33421	33434	56192	56192					0.09229898134026371
RPLESKPVNIL	11	Unmodified	_RPLESKPVNIL_					0	0	0		nc|ENSG00000137727|Q9P2F6-4|ARHGAP20;nc|ENSG00000137727|Q9P2F6-2|ARHGAP20;nc|ENSG00000137727|Q9P2F6-3|ARHGAP20;ENSG00000137727|ENST00000683387|ARHGAP20	nc|ENSG00000137727|Q9P2F6-4|ARHGAP20	nc|ENSG00000137727|Q9P2F6-4|ARHGAP20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.59246826171875	3	422.590717	1264.75032	2.1003	0.00088759	2.5397	0.0010733	4.6401	0.0019609	422.59169327867005	49.208	2.7795	49.208	47.99	50.769	0.00016785					227	65	5	0	0	0	0.76892	1	4143	4143		17.833	0	1	2361900			49763	4230	33422	33435	56193	56193					0.12853609902663266
RPLEVNLPKSV	11	Unmodified	_RPLEVNLPKSV_					0	0	0			REV__nc|ENSG00000102312|Q9H237-5|PORCN	REV__nc|ENSG00000102312|Q9H237-5|PORCN	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3857421875	2	626.374612	1250.73467	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.831	1	57.942	57.442	58.442	0.11027								0	0	0	0.56276	1	4909	4909		36.447	10.383	1		+		49764	17334	33423	33436	56194	56194					0.1193332338559685
RPLGERRPVGA	11	Unmodified	_RPLGERRPVGA_					0	0	0			REV__ENST00000369769.3_1_1:111216478-111216679:-|nuORF	REV__ENST00000369769.3_1_1:111216478-111216679:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3526611328125	2	604.354545	1206.69454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.244	1	82.39	81.89	82.89	0.1455								0	0	0	0.56276	1	7916	7916		26.063	1.5442	1		+		49765	25629	33424	33437	56195	56195					0.09945821505698405
RPLGGPRPG	9	Unmodified	_RPLGGPRPG_					0	0	0			REV__ENST00000526142.5_1_11:428365-428637:-|nuORF	REV__ENST00000526142.5_1_11:428365-428637:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.7652893066406	2	453.767043	905.519533	-0.13114	-5.9507E-05	-2.4763	-0.0011237	-2.6075	-0.0011832	453.7659298914551	41.976	1.7233	41.931	41.177	42.9	-0.045471					104	47	4	0	0	0	0.78058	1	2754	2754		30.504	1.3541	1	768160	+		49766	28199	33425	33438	56196	56196					0.06299446431319211
RPLGKGLL	8	Unmodified	_RPLGKGLL_					0	0	0		nc|ENSG00000196166|Q6ZUL3-2|LINC03042;nc|ENSG00000196166|Q6ZUL3|LINC03042	nc|ENSG00000196166|Q6ZUL3-2|LINC03042	nc|ENSG00000196166|Q6ZUL3-2|LINC03042	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.3027648925781	2	427.284537	852.554522	-0.74618	-0.00031883	-0.5632	-0.00024065	-1.3094	-0.00055948	427.28437065868496	68.78	0.1792	68.744	68.708	68.887	-0.036301					8	5	2	0	0	0	0.4196	1	6662	6662		14.664	0.88877	1	49276			49767	15177	33426	33439	56197	56197					0.12234689239289764
RPLGKGLL	8	Unmodified	_RPLGKGLL_					0	0	0		nc|ENSG00000196166|Q6ZUL3-2|LINC03042;nc|ENSG00000196166|Q6ZUL3|LINC03042	nc|ENSG00000196166|Q6ZUL3-2|LINC03042	nc|ENSG00000196166|Q6ZUL3-2|LINC03042	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.302734375	2	427.284537	852.554522	-0.031669	-1.3532E-05	3.4024	0.0014538	3.3707	0.0014403	427.2855442851213	69.738	0.10442	70.285	70.201	70.306	0.54693					4	2	2	0	0	0	0.4196	1	7737	7737		8.8223	0	1	114540			49768	15177	33426	33439	56198	56198					0.12234689239289764
RPLIYNISYS	10	Unmodified	_RPLIYNISYS_					0	0	0			REV__ENST00000272542.7_1_2:113416849-113416969:+|nuORF	REV__ENST00000272542.7_1_2:113416849-113416969:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2924499511719	3	409.224034	1224.65027	-0.1002	-4.1003E-05	-0.90118	-0.00036878	-1.0014	-0.00040979	409.5575613563861	21.553	0.51245	20.925	20.676	21.188	-0.62834					32	12	4	0	0	0	0.37624	1	824	824		20.837	5.504	1	101130	+		49769	24547	33427	33440	56199	56199					0.04693372568840459
RPLIYNISYS	10	Unmodified	_RPLIYNISYS_					0	0	0			REV__ENST00000272542.7_1_2:113416849-113416969:+|nuORF	REV__ENST00000272542.7_1_2:113416849-113416969:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	409.224034	1224.65027	1.6783	0.00068681	-2.4422	-0.00099941	-0.76388	-0.0003126	409.55687998844087	21.34	0.54735	20.897	20.642	21.19	-0.44324	-0.013958	-0.0012924	NaN	20.837	34	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68393	+		49770	24547	33427	33440							0.04693372568840459
RPLKVEPVYLR	11	Unmodified	_RPLKVEPVYLR_					0	0	0		ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2807312011719	3	457.281995	1368.82415	0.032514	1.4868E-05	-1.6578	-0.00075808	-1.6253	-0.00074322	457.281090958162	19.569	0.50328	18.939	18.756	19.259	-0.62961					31	10	4	0	0	0	0.75121	1	544	544		21.78	0.74819	1	230420			49771	8915	33428	33441	56200	56200					0.15449578064976777
RPLKVEPVYLR	11	Unmodified	_RPLKVEPVYLR_					0	0	0		ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	457.281995	1368.82415	-2.1459	-0.00098126	-0.080386	-3.6759E-05	-2.2262	-0.001018	457.2819238894521	18.61	0.5299	18.61	18.395	18.925	0	-0.071264	0.0018491	NaN	21.78	36	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107770			49772	8915	33428	33441							0.15449578064976777
RPLKVEPVYLR	11	Unmodified	_RPLKVEPVYLR_					0	0	0		ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	457.281995	1368.82415	-1.2769	-0.0005839	-0.82745	-0.00037838	-2.1043	-0.00096228	457.2816509560767	18.619	0.44595	18.663	18.498	18.944	0.044048	-0.018022	0.00082424	NaN	21.78	38	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135610			49773	8915	33428	33441							0.15449578064976777
RPLKVEPVYLR	11	Unmodified	_RPLKVEPVYLR_					0	0	0		ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	457.281995	1368.82415	0.039717	1.8162E-05	-1.6396	-0.00074977	-1.5999	-0.00073161	457.28126762602494	18.44	0.50739	18.506	18.267	18.774	0.066298	-0.1753	-0.00028996	NaN	21.78	33	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141510			49774	8915	33428	33441							0.15449578064976777
RPLKVEPVYLR	11	Unmodified	_RPLKVEPVYLR_					0	0	0		ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	457.281995	1368.82415	0.63143	0.00028874	-2.3416	-0.0010708	-1.7101	-0.00078202	457.2810191380911	18.461	0.31208	18.437	18.288	18.6	-0.024035	-0.24427	-0.0012529	NaN	21.78	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165210			49775	8915	33428	33441							0.15449578064976777
RPLKVEPVYLR	11	Unmodified	_RPLKVEPVYLR_					0	0	0		ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	ENSG00000259956|ENST00000563281|RBM15B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	457.281995	1368.82415	0.043285	1.9794E-05	-1.8846	-0.00086177	-1.8413	-0.00084198	457.28110739657893	19.402	0.74435	18.932	18.7	19.444	-0.46967	0.25101	-0.00062595	NaN	21.78	28	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	167040			49776	8915	33428	33441							0.15449578064976777
RPLLAWLRNAT	11	Unmodified	_RPLLAWLRNAT_					0	0	0		ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	ENSG00000261594|ENST00000562197|TPBGL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.5942687988281	3	437.594573	1309.76189	0.016943	7.4144E-06	-2.0202	-0.00088403	-2.0033	-0.00087661	437.59358898344584	17.111	0.51696	17.173	16.92	17.437	0.062601					54	22	4	0	0	0	0.67762	1	224	224		35.178	10.946	1	287190			49777	8926	33429	33442	56201	56201					0.11939851716647354
RPLLHPGEL	9	Unmodified	_RPLLHPGEL_					0	0	0			REV__ENST00000588254.1_1_19:56000931-56001261:+|nuORF	REV__ENST00000588254.1_1_19:56000931-56001261:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3055419921875	2	516.303458	1030.59236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.452	1	62.475	61.975	62.975	0.022984								0	0	0	0.28772	1	5447	5447		35.618	2.1027	1		+		49778	29138	33430	33443	56202	56202					0.07829155434069435
RPLLIGGF	8	Unmodified	_RPLLIGGF_					0	0	0		ENST00000505104.5_1_4:9882098-10027590:-|nuORF;nc|ENSG00000109667|Q9NRM0-2|SLC2A9;ENSG00000109667|ENST00000264784|SLC2A9	ENST00000505104.5_1_4:9882098-10027590:-|nuORF;nc|ENSG00000109667|Q9NRM0-2|SLC2A9	ENST00000505104.5_1_4:9882098-10027590:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7735900878906	2	436.771263	871.527973	1.7437	0.00076159	3.2678	0.0014273	5.0114	0.0021889	436.7728952540282	27.595	1.1661	27.572	27.227	28.393	-0.023556					56	27	3	0	0	0	0.83466	1	1280	1280		23.037	0	1	71535			49779	12918;2472	33431	33444	56203	56203					0.0870700034794254
RPLLKSALRTV	11	Unmodified	_RPLLKSALRTV_					0	0	0		ENST00000411998.1_1_21:34638094-34638440:-|nuORF	ENST00000411998.1_1_21:34638094-34638440:-|nuORF	ENST00000411998.1_1_21:34638094-34638440:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.9387512207031	3	418.60659	1252.79794	-1.7442	-0.00073012	-2.6386	-0.0011045	-4.3828	-0.0018347	418.60537062211796	49.043	4.3192	49.043	47.911	52.23	0					175	108	3	0	0	0	0.75457	1	3907	3907		21.032	5.6991	1	101990			49780	11332	33432	33445	56204	56204					0.1816530889348087
RPLLPLPRTA	10	Unmodified	_RPLLPLPRTA_					0	0	0		ENST00000518883.6_1_8:38244092-38245477:+|nuORF	ENST00000518883.6_1_8:38244092-38245477:+|nuORF	ENST00000518883.6_1_8:38244092-38245477:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3627319335938	2	567.361308	1132.70806	0.15466	8.7749E-05	3.9039	0.0022149	4.0585	0.0023027	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.8651	1	3045	3045		25.574	1.0549	1	1937600			49781	13124	33433	33446	56205	56205					0.14701679284939928
RPLLSHFL	8	Unmodified	_RPLLSHFL_					0	0	0		ENST00000264934.5_1_5:32230418-32242200:-|nuORF	ENST00000264934.5_1_5:32230418-32242200:-|nuORF	ENST00000264934.5_1_5:32230418-32242200:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956237792969	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.884	1	3415	3415		33.516	5.2613	1	2747400			49782	9489	33434	33447	56206	56206					0.08446074267999393
RPLLTEPSALL	11	Unmodified	_RPLLTEPSALL_					0	0	0			REV__ENST00000361565.8_1_1:201845464-201845701:+|nuORF	REV__ENST00000361565.8_1_1:201845464-201845701:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9102783203125	3	403.911568	1208.71287	-0.34293	-0.00013851	-3.0849	-0.001246	-3.4279	-0.0013846	403.9102188126006	68.233	2.7499	68.781	67.193	69.943	0.54819					138	70	3	0	0	0	0.61824	1	7434	7434		42.338	7.1861	1	253300	+		49783	25505	33435	33448	56207	56207					0.11686518637043264
RPLLVPSLAR	10	Unmodified	_RPLLVPSLAR_					0	0	0			REV__ENST00000274000.9_2_4:113152930-113153059:+|nuORF	REV__ENST00000274000.9_2_4:113152930-113153059:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.36279296875	2	561.361308	1120.70806	-0.061787	-3.4685E-05	3.5032	0.0019666	3.4414	0.0019319	561.3631099932169	44.376	1.0511	44.826	44.16	45.211	0.45024					79	25	4	0	0	0	0.86471	1	4052	4052		30.318	4.7437	1	3514300	+		49784	24561	33436	33449	56208	56208					0.15253679284933241
RPLNHVSD	8	Unmodified	_RPLNHVSD_					0	0	0			REV__ENSG00000113296|ENST00000350881|THBS4	REV__ENSG00000113296|ENST00000350881|THBS4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7232971191406	2	469.246141	936.477728	1.0388	0.00048744	2.5488	0.001196	3.5876	0.0016835	469.24737011847367	92.756	1.0479	93.203	92.776	93.824	0.44661					34	24	2	0	0	0	0.4196	1	11094	11094		37.159	14.117	1	97435	+		49785	17987	33437	33450	56209	56209					0.006948459521368022
RPLNHVSD	8	Unmodified	_RPLNHVSD_					0	0	0			REV__ENSG00000113296|ENST00000350881|THBS4	REV__ENSG00000113296|ENST00000350881|THBS4	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	469.246141	936.477728	-1.0209	-0.00047905	4.0018	0.0018778	2.9809	0.0013988	469.2479136924507	93.349	1.1191	93.349	93.025	94.144	0	0.16671	0.00096	NaN	37.159	56	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	293960	+		49786	17987	33437	33450							0.006948459521368022
RPLNHVSD	8	Unmodified	_RPLNHVSD_					0	0	0			REV__ENSG00000113296|ENST00000350881|THBS4	REV__ENSG00000113296|ENST00000350881|THBS4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	469.246141	936.477728	-0.11281	-5.2936E-05	2.7866	0.0013076	2.6738	0.0012547	469.2473064764124	93.218	1.3406	93.288	92.841	94.182	0.06987	0.1064	-0.00018045	NaN	37.159	80	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	369390	+		49787	17987	33437	33450							0.006948459521368022
RPLNHVSD	8	Unmodified	_RPLNHVSD_					0	0	0			REV__ENSG00000113296|ENST00000350881|THBS4	REV__ENSG00000113296|ENST00000350881|THBS4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	469.246141	936.477728	1.7559	0.00082395	0.4828	0.00022655	2.2387	0.0010505	469.2462182502289	93.163	1.122	93.101	92.677	93.799	-0.061432	-0.080638	-0.0023426	NaN	37.159	64	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	342440	+		49788	17987	33437	33450							0.006948459521368022
RPLNHVSD	8	Unmodified	_RPLNHVSD_					0	0	0			REV__ENSG00000113296|ENST00000350881|THBS4	REV__ENSG00000113296|ENST00000350881|THBS4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	469.246141	936.477728	0.16109	7.5593E-05	2.2787	0.0010693	2.4398	0.0011449	469.24697871369864	92.995	1.3835	93.041	92.668	94.052	0.045456	-0.14138	-0.00065712	NaN	37.159	70	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	389870	+		49789	17987	33437	33450							0.006948459521368022
RPLNHVSD	8	Unmodified	_RPLNHVSD_					0	0	0			REV__ENSG00000113296|ENST00000350881|THBS4	REV__ENSG00000113296|ENST00000350881|THBS4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	469.246141	936.477728	-0.96681	-0.00045367	3.3108	0.0015536	2.344	0.0010999	469.24752770402347	92.921	1.1627	93.146	92.747	93.91	0.22548	-0.035825	0.00031151	NaN	37.159	60	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	400200	+		49790	17987	33437	33450							0.006948459521368022
RPLNHVSD	8	Unmodified	_RPLNHVSD_					0	0	0			REV__ENSG00000113296|ENST00000350881|THBS4	REV__ENSG00000113296|ENST00000350881|THBS4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	469.246141	936.477728	0.70271	0.00032974	1.9414	0.00091098	2.6441	0.0012407	469.2468839297126	92.933	0.99319	93.092	92.709	93.702	0.15875	-0.090311	-0.0009737	NaN	37.159	54	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	384000	+		49791	17987	33437	33450							0.006948459521368022
RPLNHVSD	8	Unmodified	_RPLNHVSD_					0	0	0			REV__ENSG00000113296|ENST00000350881|THBS4	REV__ENSG00000113296|ENST00000350881|THBS4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	469.246141	936.477728	-1.7151	-0.00080482	4.4272	0.0020774	2.712	0.0012726	469.2480792580133	92.954	1.2152	93.146	92.735	93.95	0.19239	-0.035682	0.0013592	NaN	37.159	68	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	451680	+		49792	17987	33437	33450							0.006948459521368022
RPLNHVSD	8	Unmodified	_RPLNHVSD_					0	0	0			REV__ENSG00000113296|ENST00000350881|THBS4	REV__ENSG00000113296|ENST00000350881|THBS4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	469.246141	936.477728	-0.99238	-0.00046567	4.248	0.0019934	3.2556	0.0015277	469.2481082805212	92.822	0.87419	93.272	92.861	93.735	0.44988	0.089957	0.0011911	NaN	37.159	31	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129500	+		49793	17987	33437	33450							0.006948459521368022
RPLPFRRAAG	10	Unmodified	_RPLPFRRAAG_					0	0	0			REV__ENST00000527204.5_2_11:62366051-62368578:-|nuORF	REV__ENST00000527204.5_2_11:62366051-62368578:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8387451171875	2	570.841074	1139.66759	0.24304	0.00013874	-4.1871	-0.0023902	-3.9441	-0.0022514	570.8387431841412	50.551	0.65606	50.999	50.682	51.338	0.44761					39	15	4	0	0	0	0.86218	1	5013	5013		32.812	1.1781	1	2779100	+		49794	28224	33438	33451	56210	56210					0.10334757685154727
RPLPLCISK	9	Unmodified	_RPLPLCISK_					0	0	0			REV__ENST00000323116.9_2_3:182638358-182638487:+|nuORF	REV__ENST00000323116.9_2_3:182638358-182638487:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.80908203125	2	513.810062	1025.60557	-1.4174	-0.00072826	-0.72923	-0.00037469	-2.1466	-0.0011029	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.7932	1	3988	3988		26.693	2.4902	1	1977600	+		49795	25028	33439	33452	56211	56211					0.09379270221802471
RPLPLCISK	9	Unmodified	_RPLPLCISK_					0	0	0			REV__ENST00000323116.9_2_3:182638358-182638487:+|nuORF	REV__ENST00000323116.9_2_3:182638358-182638487:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8087768554688	2	513.810062	1025.60557	-0.38547	-0.00019806	-1.5611	-0.00080208	-1.9465	-0.0010001	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.77244	1	3851	3851		32.812	6.1195	1	1377600	+		49796	25028	33439	33452	56212	56212					0.09379270221802471
RPLPPLPGTA	10	Unmodified	_RPLPPLPGTA_					0	0	0		ENST00000367161.7_1_1:205156906-205180643:-|nuORF	ENST00000367161.7_1_1:205156906-205180643:-|nuORF	ENST00000367161.7_1_1:205156906-205180643:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.80426025390625	2	509.805834	1017.59712	-0.35462	-0.00018079	-2.9955	-0.0015271	-3.3501	-0.0017079	509.80413554119815	99.2	1.1177	99.422	99.047	100.17	0.22262					55	26	3	0	0	0	0.85934	1	10346	10346		35.618	1.4457	1	290070			49797	10537	33440	33453	56213	56213					0.08902039576855714
RPLPSLLLPVC	11	Unmodified	_RPLPSLLLPVC_					0	0	0			REV__ENST00000323906.8_1_19:49843657-49843858:+|nuORF	REV__ENST00000323906.8_1_19:49843657-49843858:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.366455078125	2	604.365201	1206.71585	-1.2751	-0.0007706	3.3813	0.0020435	2.1062	0.0012729	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.7434	1	11362	11362		23.523	4.4192	1	103250000	+		49798	25036	33441	33454	56214	56214					0.12076070490184065
RPLPSVLDPAK	11	Unmodified	_RPLPSVLDPAK_					0	0	0		ENSG00000271303|ENST00000381962|SRXN1	ENSG00000271303|ENST00000381962|SRXN1	ENSG00000271303|ENST00000381962|SRXN1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.858154296875	2	596.856055	1191.69756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.107	1	18.107	17.607	18.607	0								0	0	0	0.56276	1	271	271		22.58	0.61977	1				49799	8977	33442	33455	56215	56215					0.10937651839844875
RPLPTTHPSIL	11	Unmodified	_RPLPTTHPSIL_					0	0	0		ENST00000590513.2_1_17:40705339-40705789:-|nuORF	ENST00000590513.2_1_17:40705339-40705789:-|nuORF	ENST00000590513.2_1_17:40705339-40705789:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.2447509765625	3	411.243429	1230.70846	2.5653	0.001055	-1.8951	-0.00077935	0.67023	0.00027563	411.2424876891329	102.75	0.89561	102.98	102.74	103.63	0.22556					34	27	2	0	0	0	0.74022	1	12517	12517		24.232	1.6702	1	2184900			49800	14259	33443	33456	56216	56216					0.10233054214131698
RPLRDLTRWLV	11	Unmodified	_RPLRDLTRWLV_					0	0	0			REV__ENSG00000182674|ENST00000523207|KCNB2	REV__ENSG00000182674|ENST00000523207|KCNB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.9510803222656	3	475.62101	1423.8412	0.65047	0.00030938	-2.6633	-0.0012667	-2.0128	-0.00095735	475.61957440244635	27.133	0.3924	26.792	26.637	27.029	-0.34035					11	8	2	0	0	0	0.18028	1	1560	1560		14.694	5.0475	1	74359	+		49801	22542	33444	33457	56217	56217					0.1462349867076682
RPLRHTRL	8	Unmodified	_RPLRHTRL_					0	0	0			REV__ENSG00000176092|ENST00000308182|CRYBG2	REV__ENSG00000176092|ENST00000308182|CRYBG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8265380859375	2	524.827966	1047.64138	-1.5341	-0.00080515	-0.51612	-0.00027087	-2.0502	-0.001076	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.89043	1	10576	10576		35.618	0	1	23918000	+		49802	22106	33445	33458	56218	56218					0.11946488513672193
RPLRIGDQLVL	11	Unmodified	_RPLRIGDQLVL_					0	0	0		nc|ENSG00000110274|Q9UPV0-2|CEP164;ENSG00000110274|ENST00000278935|CEP164	nc|ENSG00000110274|Q9UPV0-2|CEP164	nc|ENSG00000110274|Q9UPV0-2|CEP164	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.391845703125	2	640.395879	1278.7772	-0.70367	-0.00045063	-3.5698	-0.0022861	-4.2735	-0.0027367	640.3935337179228	53.682	0.9059	53.657	53.238	54.144	-0.024754					44	21	3	0	0	0	0.75921	1	4801	4801		19.997	0.89325	1	128690			49803	2518	33446	33459	56219	56219					0.14896718513841734
RPLRLQSGSW	10	Unmodified	_RPLRLQSGSW_					0	0	0			REV__ENSG00000108784|ENST00000225927|NAGLU	REV__ENSG00000108784|ENST00000225927|NAGLU	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	600.3323974609375	2	600.335821	1198.65709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.242	1	28.054	27.554	28.554	-0.18851								0	0	0	0.45132	1	1704	1704		20.947	2.6225	1		+		49804	17730	33447	33460	56220	56220					0.06570730240082412
RPLRPRKERKP	11	Unmodified	_RPLRPRKERKP_					0	0	0			REV__ENSG00000169592|ENST00000563197|INO80E	REV__ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.6368103027344	3	478.303904	1431.88988	-0.94284	-0.00045096	-1.2541	-0.00059982	-2.1969	-0.0010508	478.63764981735454	66.982	1.088	67.034	66.688	67.776	0.052376					96	41	3	0	0	0	0.81021	1	5942	5942		9.2118	0.80454	1	269070	+		49805	21588	33448	33461	56221	56221					0.1912141203054034
RPLSGKRR	8	Unmodified	_RPLSGKRR_					0	0	0		ENST00000368874.8_2_1:151299811-151300171:-|nuORF	ENST00000368874.8_2_1:151299811-151300171:-|nuORF	ENST00000368874.8_2_1:151299811-151300171:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.27801513671875	2	485.306867	968.599181	0.80015	0.00038832	1.9413	0.00094215	2.7415	0.0013305	485.3075158248656	33.415	0.87708	33.627	33.271	34.148	0.21168					37	20	3	0	0	0	0.4196	1	2381	2381		16.473	0	1	449810			49806	10605	33449	33462	56222	56222					0.11362513105325434
RPLSGLRN	8	Unmodified	_RPLSGLRN_					0	0	0			REV__ENSG00000167178|ENST00000453268|ISLR2	REV__ENSG00000167178|ENST00000453268|ISLR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7724914550781	2	456.772326	911.530098	-1.7558	-0.00080201	2.154	0.00098388	0.39816	0.00018187	456.7729586253597	89.816	2.3334	89.992	88.581	90.914	0.1758					104	54	4	0	0	0	0.8347	1	8916	8916		23.042	0	1	808890	+		49807	21363	33450	33463	56223	56223					0.07079429085752054
RPLSKRAITSL	11	Unmodified	_RPLSKRAITSL_					0	0	0			REV__ENSG00000182256|ENST00000615808|GABRG3	REV__ENSG00000182256|ENST00000615808|GABRG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.3935546875	2	621.388054	1240.76155	4.2384	0.0026337	3.5756	0.0022219	7.814	0.0048555	621.3901654110842	104.31	1.8962	104.53	104.05	105.95	0.2268					124	45	4	0	0	0	0.72106	1	12791	12791		28.081	0.19925	1	1273000	+		49808	22512	33451	33464	56224	56224					0.15080431996784682
RPLSPCHQ	8	Unmodified	_RPLSPCHQ_					0	0	0			REV__ENST00000505061.5_1_15:42111520-42111628:+|nuORF	REV__ENST00000505061.5_1_15:42111520-42111628:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.2430725097656	2	469.237261	936.45997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.702	1	68.83	68.33	69.33	0.12838								0	0	0	0.29344	1	6196	6196		31.955	7.7521	1		+		49809	27872	33452	33465	56225	56225					-0.010801925743749052
RPLTKNETT	9	Unmodified	_RPLTKNETT_					0	0	0			REV__nc|ENSG00000175866|Q9UQB8-3|BAIAP2	REV__nc|ENSG00000175866|Q9UQB8-3|BAIAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2930297851562	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.69624	1	9282	9282		40.778	3.6191	1	1864800	+		49810	22086	33453	33466	56226	56226					0.04507939983614051
RPLVGSVK	8	Unmodified	_RPLVGSVK_					0	0	0			REV__ENST00000395474.7_2_3:49052727-49052976:+|nuORF	REV__ENST00000395474.7_2_3:49052727-49052976:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.3027648925781	2	428.27417	854.533787	0.3925	0.0001681	-3.8098	-0.0016317	-3.4173	-0.0014636	428.269582033298	62.857	0.21413	62.978	62.866	63.08	0.1209					14	9	3	0	0	0	0.4196	1	5498	5498		10.866	0.6003	1	56467	+		49811	26110	33454	33467	56227	56227					0.10070098859614518
RPLVTLIKLEV	11	Unmodified	_RPLVTLIKLEV_					0	0	0			REV__ENST00000524045.6_1_8:106799777-107071320:-|nuORF	REV__ENST00000524045.6_1_8:106799777-107071320:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	427.30279541015625	3	427.614862	1279.82276	-0.96117	-0.00041101	0.92865	0.00039711	-0.032511	-1.3902E-05	427.6149254113155	62.921	0.1207	62.944	62.853	62.974	0.022984					7	5	2	0	0	0	0.17504	1	5485	5485		25.068	14.964	1	55240	+		49812	28152	33455	33468	56228	56228					0.194039439762264
RPLWAPAGQGR	11	Unmodified	_RPLWAPAGQGR_					0	0	0		ENST00000434837.7_1_6:37665242-37665689:-|nuORF	ENST00000434837.7_1_6:37665242-37665689:-|nuORF	ENST00000434837.7_1_6:37665242-37665689:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.5617370605469	3	403.559751	1207.65742	0.70065	0.00028275	-0.077772	-3.1386E-05	0.62288	0.00025137	403.5596050855879	22.48	0.98659	22.545	22.232	23.218	0.064745					76	37	3	0	0	0	0.72374	1	670	670		27.644	3.1247	1	100540			49813	11700	33456	33469	56229	56229					0.06190149959934388
RPMLAPHFV	9	Unmodified	_RPMLAPHFV_					0	0	0		ENSG00000254470|ENST00000532090|AP5B1;ENST00000316846.2_11:65545618-65547282:-|nuORF	ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	534.2943115234375	2	534.294579	1066.57461	-1.5023	-0.00080264	1.6654	0.00088984	0.16319	8.7191E-05	534.295427117142	88.335	3.7823	88.504	87.046	90.828	0.16923					157	88	2	0	0	0	0.69914	1	8670	8670		40.573	0.51445	1	483520			49814	8876	33457	33470	56230	56230					0.0439811690755505
RPNRKKKFNKH	11	Unmodified	_RPNRKKKFNKH_					0	0	0			REV__ENSG00000137876|ENST00000260443|RSL24D1	REV__ENSG00000137876|ENST00000260443|RSL24D1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.97479248046875	3	484.960138	1451.85858	0.72156	0.00034993	4.189	0.0020315	4.9106	0.0023814	484.9619305745078	16.363	0.31517	16.339	16.183	16.499	-0.024035					29	14	3	0	0	0	0.181	1	149	149		9.2118	0	1	244580	+		49815	19421	33458	33471	56231	56231					0.15072838996456994
RPNRKKKFNKH	11	Unmodified	_RPNRKKKFNKH_					0	0	0			REV__ENSG00000137876|ENST00000260443|RSL24D1	REV__ENSG00000137876|ENST00000260443|RSL24D1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.30828857421875	3	484.960138	1451.85858	0.09521	4.6173E-05	-3.8091	-0.0018472	-3.7139	-0.0018011	485.29316521113344	16.453	0.27537	15.855	15.694	15.97	-0.59873					6	5	2	0	0	0	0.18238	1	148	148		13.508	7.1871	1	18892	+		49816	19421	33458	33471	56232	56232					0.15072838996456994
RPNRSKLQDML	11	Unmodified	_RPNRSKLQDML_					0	0	0		ENSG00000115808|ENST00000263918|STRN	ENSG00000115808|ENST00000263918|STRN	ENSG00000115808|ENST00000263918|STRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.5832824707031	3	453.250477	1356.7296	0.66324	0.00030061	-3.0868	-0.0013991	-2.4235	-0.0010985	453.24905718399623	23.771	1.0969	23.827	23.444	24.541	0.055487					76	30	3	0	0	0	0.74022	1	860	860		24.232	2.4514	1	185360			49817	2873	33459	33472	56233	56233					0.06550696251338195
RPNSKIKVKF	10	Unmodified	_RPNSKIKVKF_					0	0	0		ENSG00000010072|ENST00000295050|SPRTN	ENSG00000010072|ENST00000295050|SPRTN	ENSG00000010072|ENST00000295050|SPRTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.8824462890625	2	608.879865	1215.74518	4.9177	0.0029943	0.75839	0.00046177	5.6761	0.0034561	608.8800497135209	107.73	0.32504	107.85	107.59	107.91	0.11715					40	13	4	0	0	0	0.86763	1	13180	13180		26.693	3.1702	1	4321600			49818	761	33460	33473	56234	56234					0.1459335083068254
RPPAKLTSLLI	11	Unmodified	_RPPAKLTSLLI_					0	0	0			REV__ENST00000370251.3_2_X:152610995-152612303:+|nuORF	REV__ENST00000370251.3_2_X:152610995-152612303:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.8927001953125	2	604.889898	1207.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.792	1	20.868	20.368	21.368	0.075848								0	0	0	0.56276	1	538	538		12.812	0	1		+		49819	25647	33461	33474	56235	56235					0.1696710177066052
RPPATGLVS	9	Unmodified	_RPPATGLVS_					0	0	0		ENSG00000185905|ENST00000329410|C16orf54	ENSG00000185905|ENST00000329410|C16orf54	ENSG00000185905|ENST00000329410|C16orf54	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.2599182128906	2	449.261259	896.507966	0.086224	3.8737E-05	-2.0246	-0.00090958	-1.9384	-0.00087084	449.2601788042096	68.841	0.73721	68.874	68.516	69.253	0.033005					47	30	2	0	0	0	0.78058	1	6584	6584		30.504	0.18592	1	184640			49820	7754	33462	33475	56236	56236					0.05557204617332445
RPPFDLIMVLS	11	Unmodified	_RPPFDLIMVLS_					0	0	0		ENST00000446626.2_1_9:46844845-46845151:+|nuORF	ENST00000446626.2_1_9:46844845-46845151:+|nuORF	ENST00000446626.2_1_9:46844845-46845151:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	644.8643188476562	2	644.360116	1286.70568	-1.1431	-0.00073659	3.3219	0.0021405	2.1787	0.0014039	644.3631031191973	112.36	0.29048	112.33	112.21	112.5	-0.032333					16	8	2	0	0	0	0.65746	2	11982	11978;11982		37.812	7.7381	1	4203100			49821	11837	33463	33476	56237;56238	56238					0.07379462764970413
RPPGNKKMVA	10	Unmodified	_RPPGNKKMVA_					0	0	0		ENSG00000106479|ENST00000223210|ZNF862	ENSG00000106479|ENST00000223210|ZNF862	ENSG00000106479|ENST00000223210|ZNF862	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3184814453125	2	549.316043	1096.61753	-1.4544	-0.00079891	4.3496	0.0023893	2.8953	0.0015904	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.86589	1	10624	10624		29.15	3.6994	1	2310400			49822	2299	33464	33477	56239	56239					0.0730888696502916
RPPHAGLH	8	Unmodified	_RPPHAGLH_					0	0	0			REV__ENST00000243878.8_1_16:67700286-67700655:-|nuORF	REV__ENST00000243878.8_1_16:67700286-67700655:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7447204589844	2	442.746111	883.477669	-0.84967	-0.00037619	-1.9572	-0.00086653	-2.8068	-0.0012427	442.74508565704974	91.361	1.8975	91.832	90.855	92.753	0.47068					98	45	4	0	0	0	0.92176	1	10918	10918		46.766	6.1938	1	3563500	+		49823	24238	33465	33478	56240	56240					0.03126890742805699
RPPIKVGCL	9	Unmodified	_RPPIKVGCL_					0	0	0		ENST00000598519.1_1_19:55987989-55992892:+|nuORF	ENST00000598519.1_1_19:55987989-55992892:+|nuORF	ENST00000598519.1_1_19:55987989-55992892:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7962951660156	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.44	1	59.44	58.94	59.94	0								0	0	0	0.2969	1	5170	5170		31.955	8.9124	1				49824	14368	33466	33479	56241	56241					0.08783001050335315
RPPILSVNTT	10	Unmodified	_RPPILSVNTT_					0	0	0			REV__ENST00000547136.1_1_12:48359585-48360048:+|nuORF	REV__ENST00000547136.1_1_12:48359585-48360048:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.3185424804688	2	549.319306	1096.62406	-0.48303	-0.00026534	-2.2746	-0.0012495	-2.7576	-0.0015148	549.3179926126767	101.27	2.2263	101.27	100.73	102.96	0					128	54	4	0	0	0	0.8651	1	10260	10260		25.574	2.5316	1	1196600	+		49825	19129	33467	33480	56242	56242					0.0796110339738334
RPPILSVNTT	10	Unmodified	_RPPILSVNTT_					0	0	0			REV__ENST00000547136.1_1_12:48359585-48360048:+|nuORF	REV__ENST00000547136.1_1_12:48359585-48360048:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.3178100585938	2	549.319306	1096.62406	-0.54475	-0.00029924	-2.4274	-0.0013334	-2.9721	-0.0016327	549.3179138519522	101.15	1.9875	101.19	100.7	102.69	0.031036					127	47	4	0	0	0	0.8651	1	10762	10762		25.574	2.0514	1	2171100	+		49826	19129	33467	33480	56243	56243					0.0796110339738334
RPPISPALAP	10	Unmodified	_RPPISPALAP_					0	0	0			REV__ENST00000562206.1_1_16:67426983-67427259:-|nuORF	REV__ENST00000562206.1_1_16:67426983-67427259:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.803955078125	2	509.805834	1017.59712	0.075306	3.8391E-05	-4.2119	-0.0021473	-4.1366	-0.0021089	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.86218	1	8582	8582		32.812	0	1	958280	+		49827	28791	33468	33481	56244	56244					0.08902039576832976
RPPKLGPD	8	Unmodified	_RPPKLGPD_					0	0	0			REV__ENST00000490170.5_1_1:27674035-27676436:+|nuORF	REV__ENST00000490170.5_1_1:27674035-27676436:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2553405761719	2	440.255977	878.497401	-1.0794	-0.00047521	-0.44173	-0.00019447	-1.5211	-0.00066968	440.25573050255707	67.457	0.77168	67.51	67.2	67.972	0.052368					65	27	4	0	0	0	0.884	1	6026	6026		33.516	0	1	460120	+		49828	27632	33469	33482	56245	56245					0.05329221962892916
RPPKRSAKRPF	11	Unmodified	_RPPKRSAKRPF_					0	0	0			REV__ENST00000467459.5_1_1:45794980-45797699:-|nuORF	REV__ENST00000467459.5_1_1:45794980-45797699:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2730407714844	3	447.273834	1338.79967	-1.2893	-0.00057667	-1.0425	-0.0004663	-2.3318	-0.001043	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.75457	1	11442	11442		21.032	0	1	31263000	+		49829	19031	33470	33483	56246	56246					0.14382362702099272
RPPKTKPLNKS	11	Unmodified	_RPPKTKPLNKS_					0	0	0			REV__nc|ENSG00000167566|Q9HCH0-2|NCKAP5L	REV__nc|ENSG00000167566|Q9HCH0-2|NCKAP5L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.592529296875	3	422.594461	1264.76155	-1.7406	-0.00073557	-2.5077	-0.0010597	-4.2483	-0.0017953	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.75457	1	3888	3888		21.032	0.19508	1	1126900	+		49830	21396	33471	33484	56247	56247					0.13976431996798055
RPPLLFDLSR	10	Unmodified	_RPPLLFDLSR_					0	0	0		ENST00000495294.1_1_X:2825314-2825683:-|nuORF;ENSG00000006756|ENST00000381154|ARSD	ENST00000495294.1_1_X:2825314-2825683:-|nuORF	ENST00000495294.1_1_X:2825314-2825683:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.240966796875	3	405.239907	1212.69789	2.8206	0.001143	-1.6704	-0.00067693	1.1502	0.0004661	405.23932671083884	102.69	0.23547	102.92	102.78	103.02	0.22556					12	8	2	0	0	0	0.85692	1	12470	12470		36.318	6.7669	1	2191700			49831	714	33472	33485	56248	56248					0.10005071559703538
RPPLLLLLL	9	Unmodified	_RPPLLLLLL_					0	0	0		nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B	REV__nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000185033|Q9NPR2-2|SEMA4B	REV__nc|ENSG00000155093|Q92932-4|PTPRN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.3237915039062	2	524.36807	1046.72159	0.52213	0.00027379	-1.0899	-0.00057149	-0.56773	-0.0002977	524.3667816137674	29.698	3.1873	29.608	28.333	31.52	-0.089546					126	74	3	0	0	0	0.20789	1	2005	2005		11.511	0	1	179480			49832	20415;7671	33473	33486	56249	56249					0.20009537064174765
RPPLQWGKGLM	11	Unmodified	_RPPLQWGKGLM_					0	0	0		ENSG00000144843|ENST00000357003|ADPRH;ENST00000471850.1_1_3:119298364-119306722:+|nuORF	ENSG00000144843|ENST00000357003|ADPRH	ENSG00000144843|ENST00000357003|ADPRH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3622436523438	2	641.858075	1281.7016	-0.047502	-3.0489E-05	1.7163	0.0011016	1.6688	0.0010711	642.3607489097492	117.62	0.31653	117.55	117.34	117.65	-0.07531					33	10	4	0	0	0	0.68378	1	12611	12611		34.173	7.1252	1	442700			49833	4737	33474	33487	56250	56250					0.072014180619135
RPPLTLKSVDK	11	Unmodified	_RPPLTLKSVDK_					0	0	0			REV__nc|ENSG00000130338|Q9NRJ4-2|TULP4	REV__nc|ENSG00000130338|Q9NRJ4-2|TULP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3850708007812	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.7144	5	12841	12841;12854;12973;13062;13089		29.17	3.596	1	19815000	+		49834	18867	33475	33488	56251;56252;56253;56254;56255	56251					0.1340560990265658
RPPPLKVLSNP	11	Unmodified	_RPPPLKVLSNP_					0	0	0			REV__ENST00000594708.1_1_9:72873172-72873439:-|nuORF	REV__ENST00000594708.1_1_9:72873172-72873439:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.58343505859375	3	406.583674	1216.72919	-1.7911	-0.00072824	2.7397	0.0011139	0.94861	0.00038569	406.5846515524058	112.19	0.31435	112.3	112.2	112.51	0.10638					30	11	3	0	0	0	0.72374	1	12084	12084		27.644	6.8068	1	4130800	+		49835	29238	33476	33489	56256	56256					0.12949644593822995
RPPPLKVLSNP	11	Unmodified	_RPPPLKVLSNP_					0	0	0			REV__ENST00000594708.1_1_9:72873172-72873439:-|nuORF	REV__ENST00000594708.1_1_9:72873172-72873439:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.9183044433594	3	406.583674	1216.72919	-1.927	-0.00078348	2.7576	0.0011212	0.83063	0.00033772	406.58477414221215	112.11	0.72639	112.09	111.83	112.55	-0.01989					36	23	2	0	0	0	0.72892	2	11929	11929;11938		26.75	3.227	1	4313100	+		49836	29238	33476	33489	56257;56258	56257					0.12949644593822995
RPPPPLAAPP	10	Unmodified	_RPPPPLAAPP_					0	0	0			REV__nc|ENSG00000148200|Q15406-5|NR6A1	REV__nc|ENSG00000148200|Q15406-5|NR6A1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.801025390625	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.936	1	43.878	43.378	44.378	-0.058262								0	0	0	0.45132	1	3061	3061		30.504	2.4222	1		+		49837	20101	33477	33490	56259	56259					0.08122056922411502
RPPPPLPAVC	10	Unmodified	_RPPPPLPAVC_					0	0	0		ENST00000573308.5_1_4:16228380-16240465:+|nuORF	ENST00000573308.5_1_4:16228380-16240465:+|nuORF	ENST00000573308.5_1_4:16228380-16240465:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7664184570312	2	523.794412	1045.57427	-0.17165	-8.9908E-05	-3.1498	-0.0016498	-3.3214	-0.0017397	523.7931589499901	53.643	0.12585	54.228	54.123	54.249	0.58474					4	2	2	0	0	0	0.37624	1	5445	5445		23.042	0	1	26920			49838	14018	33478	33491	56260	56260					0.05330697187741862
RPPPPPPG	8	Unmodified	_RPPPPPPG_					0	0	0		nc|ENSG00000153317|Q9ULH1-2|ASAP1;ENSG00000153317|ENST00000518721|ASAP1;ENSG00000269855|ENST00000601382|RNF225	nc|ENSG00000153317|Q9ULH1-2|ASAP1	nc|ENSG00000153317|Q9ULH1-2|ASAP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7843322753906	2	407.732138	813.449723	1.5845	0.00064605	-2.7121	-0.0011058	-1.1276	-0.00045975	407.73100079043746	34.708	0.32842	34.918	34.687	35.016	0.21003					10	7	2	0	0	0	0.4196	1	2589	2589		21.702	0	1	183470			49839	5232	33479	33492	56261	56261					0.035535677627080986
RPPPVPPAAS	10	Unmodified	_RPPPVPPAAS_					0	0	0			REV__ENSG00000079482|ENST00000355520|OPHN1	REV__ENSG00000079482|ENST00000355520|OPHN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7803649902344	2	494.782359	987.550165	-0.85772	-0.00042438	-3.1278	-0.0015476	-3.9855	-0.001972	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.8608	1	8888	8888		34.173	2.6427	1	737700	+		49840	16787	33480	33493	56262	56262					0.0558918002569726
RPPPVPPAAS	10	Unmodified	_RPPPVPPAAS_					0	0	0			REV__ENSG00000079482|ENST00000355520|OPHN1	REV__ENSG00000079482|ENST00000355520|OPHN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7808532714844	2	494.782359	987.550165	-1.5759	-0.00077971	-2.3488	-0.0011622	-3.9247	-0.0019419	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.86718	1	8346	8346		27.882	0	1	569520	+		49841	16787	33480	33493	56263	56263					0.0558918002569726
RPPQQFYHR	9	Unmodified	_RPPQQFYHR_					0	0	0			REV__ENSG00000133958|ENST00000695012|UNC79	REV__ENSG00000133958|ENST00000695012|UNC79	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	410.21881103515625	3	410.215984	1227.62612	2.9493	0.0012098	3.2854	0.0013477	6.2347	0.0025576	410.217291685665	16.833	0.30132	16.751	16.62	16.921	-0.0821					25	12	3	0	0	0	0.76764	1	182	182		34.173	2.5383	1	143500	+		49842	19104	33481	33494	56264	56264					0.021415769258283035
RPPRPAGG	8	Unmodified	_RPPRPAGG_					0	0	0		ENST00000303221.9_1_5:49724015-49737091:-|nuORF	ENST00000303221.9_1_5:49724015-49737091:-|nuORF	ENST00000303221.9_1_5:49724015-49737091:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2335205078125	2	404.232836	806.45112	-1.2204	-0.00049332	1.7807	0.00071981	0.5603	0.00022649	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.884	1	8110	8110		33.516	6.7195	1	2752600			49843	9828	33482	33495	56265	56265					0.040152018514731935
RPPRPRPPPLP	11	Unmodified	_RPPRPRPPPLP_					0	0	0			REV__ENST00000332029.2_1_16:11349085-11349304:-|nuORF	REV__ENST00000332029.2_1_16:11349085-11349304:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.39111328125	2	640.390931	1278.76731	0.18689	0.00011969	2.817	0.001804	3.0038	0.0019236	640.3926444536196	51.078	1.0383	51.513	50.994	52.033	0.43505					62	24	3	0	0	0	0.6921	1	5028	5028		32.812	2.2436	1	1259400	+		49844	25133	33483	33496	56266	56266					0.13907575299117525
RPPSLVQSKD	10	Unmodified	_RPPSLVQSKD_					0	0	0			REV__ENST00000474353.6_1_10:97106208-97250794:-|nuORF	REV__ENST00000474353.6_1_10:97106208-97250794:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.8162841796875	2	563.814387	1125.61422	0.4108	0.00023161	4.4343	0.0025001	4.845	0.0027317	563.8167084474933	53.74	1.0262	53.763	53.411	54.438	0.022541					39	28	2	0	0	0	0.86272	1	4788	4788		24.519	2.5593	1	133250	+		49845	27298	33484	33497	56267	56267					0.056439153920109675
RPPTEPSYKY	10	Unmodified	_RPPTEPSYKY_					0	0	0			REV__nc|ENSG00000183054|Q99666-2|RGPD5	REV__nc|ENSG00000183054|Q99666-2|RGPD5	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.3140258789062	2	619.31422	1236.61389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.353	1	59.447	58.947	59.947	0.094059								0	0	0	0.45132	1	5080	5080		31.53	7.0106	1		+		49846	16211	33485	33498	56268	56268					0.005044956721576455
RPPTSVSKKNT	11	Unmodified	_RPPTSVSKKNT_					0	0	0			REV__nc|ENSG00000174371|Q9UQ84-4|EXO1	REV__nc|ENSG00000174371|Q9UQ84-4|EXO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5646667480469	3	405.566571	1213.67788	-1.5366	-0.00062318	-2.7212	-0.0011036	-4.2578	-0.0017268	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.74002	1	5592	5592		24.276	4.2455	1	187890	+		49847	21988	33486	33499	56269	56269					0.0795927582908007
RPPVYLHDVI	10	Unmodified	_RPPVYLHDVI_					0	0	0		ENSG00000152208|ENST00000282020|GRID2;ENST00000505687.5_1_4:93225807-94138074:+|nuORF;ENST00000515744.5_1_4:93744106-94033158:+|nuORF	ENSG00000152208|ENST00000282020|GRID2	ENSG00000152208|ENST00000282020|GRID2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5753173828125	3	403.564391	1207.67134	-0.15744	-6.3537E-05	-1.4453	-0.00058327	-1.6027	-0.00064681	403.564065962337	80.737	0.37102	81.264	81.035	81.406	0.52676					17	8	3	0	0	0	0.37624	1	9334	9334		14.086	0	1	184340			49848	5161	33487	33500	56270	56270					0.07581382668354308
RPQKIAALSS	10	Unmodified	_RPQKIAALSS_					0	0	0		ENST00000393992.5_2_16:67244178-67260689:-|nuORF	ENST00000393992.5_2_16:67244178-67260689:-|nuORF	ENST00000393992.5_2_16:67244178-67260689:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.8137817382812	2	535.819473	1069.62439	-0.57977	-0.00031065	-3.5	-0.0018754	-4.0797	-0.002186	535.8181488865579	99.613	1.3247	99.613	99.138	100.46	0					52	31	2	0	0	0	0.8505	1	10063	10063		19.104	1.7386	1	262870			49849	11056	33488	33501	56271	56271					0.09236523117237994
RPQKYEQLLH	10	Unmodified	_RPQKYEQLLH_					0	0	0		ENSG00000183185|ENST00000472788|GABRR3	ENSG00000183185|ENST00000472788|GABRR3	ENSG00000183185|ENST00000472788|GABRR3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2431945800781	3	437.910449	1310.70952	-2.1644	-0.00094781	-0.031947	-1.399E-05	-2.1963	-0.0009618	437.9104110251152	17.522	0.33542	17.522	17.326	17.662	0					28	14	3	0	0	0	0.86621	1	224	224		26.063	1.8316	1	65289			49850	7506	33489	33502	56272	56272					0.06659268583030098
RPQLAGLDRW	10	Unmodified	_RPQLAGLDRW_					0	0	0			REV__ENST00000497094.6_2_11:73499016-73554393:+|nuORF	REV__ENST00000497094.6_2_11:73499016-73554393:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5608215332031	3	404.55964	1210.65709	2.3618	0.00095548	0.95181	0.00038506	3.3136	0.0013405	404.5599461398762	31.654	0.56111	31.648	31.385	31.946	-0.0061455					16	12	2	0	0	0	0.86802	1	1756	1756		27.047	0	1	33633	+		49851	27762	33490	33503	56273	56273					0.060187302400890985
RPQLAGLDRW	10	Unmodified	_RPQLAGLDRW_					0	0	0			REV__ENST00000497094.6_2_11:73499016-73554393:+|nuORF	REV__ENST00000497094.6_2_11:73499016-73554393:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	404.55964	1210.65709	-2.0037	-0.00081062	4.662	0.0018861	2.6583	0.0010755	404.5615519866168	31.608	0.42275	31.608	31.378	31.801	0	-0.046382	0.0017099	NaN	27.047	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42002	+		49852	27762	33490	33503							0.060187302400890985
RPQLAGLDRW	10	Unmodified	_RPQLAGLDRW_					0	0	0			REV__ENST00000497094.6_2_11:73499016-73554393:+|nuORF	REV__ENST00000497094.6_2_11:73499016-73554393:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	404.55964	1210.65709	0.07526	3.0447E-05	3.1961	0.001293	3.2713	0.0013235	404.56087982588264	31.605	0.43027	31.623	31.384	31.815	0.018362	-0.031367	-6.9315E-05	NaN	27.047	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17705	+		49853	27762	33490	33503							0.060187302400890985
RPQLAGLDRW	10	Unmodified	_RPQLAGLDRW_					0	0	0			REV__ENST00000497094.6_2_11:73499016-73554393:+|nuORF	REV__ENST00000497094.6_2_11:73499016-73554393:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	404.55964	1210.65709	-0.33035	-0.00013364	3.8101	0.0015414	3.4797	0.0014078	404.5609400915287	31.789	0.44715	31.738	31.472	31.919	-0.051031	0.08402	0.00067586	NaN	27.047	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22557	+		49854	27762	33490	33503							0.060187302400890985
RPQLAGLDRW	10	Unmodified	_RPQLAGLDRW_					0	0	0			REV__ENST00000497094.6_2_11:73499016-73554393:+|nuORF	REV__ENST00000497094.6_2_11:73499016-73554393:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	404.55964	1210.65709	2.3618	0.00095548	0.95181	0.00038506	3.3136	0.0013405	404.5599461398762	31.654	0.56111	31.648	31.385	31.946	-0.0061455	-0.0062703	-0.0027931	NaN	27.047	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33633	+		49855	27762	33490	33503							0.060187302400890985
RPQLKPLH	8	Unmodified	_RPQLKPLH_					0	0	0			REV__ENSG00000124275|ENST00000440940|MTRR	REV__ENSG00000124275|ENST00000440940|MTRR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.8055419921875	2	494.806168	987.597784	-0.45163	-0.00022347	-1.0768	-0.00053283	-1.5285	-0.0007563	494.8055403837129	78.739	1.1015	79.15	78.592	79.694	0.4106					45	25	2	0	0	0	0.93529	1	9005	9005		52.299	9.8247	1	669360	+		49856	18576	33491	33504	56274	56274					0.10348879016555657
RPQLSLAH	8	Unmodified	_RPQLSLAH_					0	0	0			REV__ENST00000358746.6_1_5:94890662-94890704:-|nuORF	REV__ENST00000358746.6_1_5:94890662-94890704:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.2671813964844	2	461.266876	920.519199	0.10818	4.9901E-05	-2.1066	-0.00097169	-1.9984	-0.00092179	461.2656469961776	34.574	0.4902	34.784	34.563	35.053	0.21003					22	11	3	0	0	0	0.87276	1	2567	2567		29.842	0.69198	1	523800	+		49857	25443	33492	33505	56275	56275					0.055760267114806084
RPQRRFARPV	10	Unmodified	_RPQRRFARPV_					0	0	0			REV__ENSG00000142082|ENST00000382743|SIRT3	REV__ENSG00000142082|ENST00000382743|SIRT3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.883056640625	2	641.883804	1281.75306	-0.046992	-3.0164E-05	-1.9848	-0.001274	-2.0318	-0.0013042	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.8651	1	9734	9734		25.574	5.5773	1	2217900	+		49858	19721	33493	33506	56276	56276					0.1234492287080684
RPQRRRGLLE	10	Unmodified	_RPQRRRGLLE_					0	0	0		ENST00000318967.6_2_1:153700611-153701247:+|nuORF	ENST00000318967.6_2_1:153700611-153701247:+|nuORF	ENST00000318967.6_2_1:153700611-153701247:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.3028564453125	3	427.593455	1279.75853	0.38583	0.00016498	-4.4119	-0.0018865	-4.0261	-0.0017215	427.59263466800775	62.082	0.49825	62.203	62.091	62.589	0.1209					34	25	2	0	0	0	0.37624	1	5444	5444		19.263	0.29635	1	76765			49859	10013	33494	33507	56277	56277					0.12984601662674322
RPQRYLST	8	Unmodified	_RPQRYLST_					0	0	0			REV__ENSG00000179270|ENST00000331664|PCARE	REV__ENSG00000179270|ENST00000331664|PCARE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.78387451171875	2	510.78289	1019.55123	0.57365	0.00029301	-0.7572	-0.00038677	-0.18355	-9.3756E-05	510.78246923554457	26.283	0.78617	26.329	26.034	26.821	0.045507					43	21	3	0	0	0	0.87922	1	1083	1083		31.955	0	1	147580	+		49860	22327	33495	33508	56278	56278					0.04223394394614388
RPQTGFSDI	9	Unmodified	_RPQTGFSDI_					0	0	0		nc|ENSG00000067606|Q05513-3|PRKCZ;ENSG00000067606|ENST00000378567|PRKCZ;nc|ENSG00000067606|Q05513-2|PRKCZ;ENST00000479263.5_1_1:2075906-2116445:+|nuORF;ENST00000505322.5_1_1:2100378-2116445:+|nuORF	nc|ENSG00000067606|Q05513-3|PRKCZ	nc|ENSG00000067606|Q05513-3|PRKCZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.75726318359375	2	510.759081	1019.50361	-0.053174	-2.7159E-05	1.9553	0.00099868	1.9021	0.00097152	510.7592868679248	28.392	0.48716	28.352	28.116	28.603	-0.039907					13	11	2	0	0	0	0.76255	1	1425	1425		35.618	4.0885	1	18275			49861	1185	33496	33509	56279	56279					-0.005363045962326396
RPRAGGQR	8	Unmodified	_RPRAGGQR_					0	0	0		ENST00000373624.6_1_9:126531826-126692300:-|nuORF	ENST00000373624.6_1_9:126531826-126692300:-|nuORF	ENST00000373624.6_1_9:126531826-126692300:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2603454589844	2	449.259917	896.50528	-1.3114	-0.00058915	2.8616	0.0012856	1.5502	0.00069644	449.26102323069586	70.48	0.6918	70.615	70.329	71.021	0.13506					54	33	2	0	0	0	0.85277	1	6394	6394		25.45	1.2474	1	313860			49862	10749	33497	33510	56280	56280					0.052887940030473146
RPRARPPRFR	10	Unmodified	_RPRARPPRFR_					0	0	0		ENST00000265165.5_1_4:109088997-109089327:-|nuORF	ENST00000265165.5_1_4:109088997-109089327:-|nuORF	ENST00000265165.5_1_4:109088997-109089327:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.9337463378906	3	436.933923	1307.77994	0.49799	0.00021759	-0.39775	-0.00017379	0.10024	4.3799E-05	436.93369927878706	20.732	2.5953	20.273	19.595	22.19	-0.4591					152	59	4	0	0	0	0.86802	1	722	722		27.047	0	1	492360			49863	9498	33498	33511	56281	56281					0.13836031481991995
RPRASIGP	8	Unmodified	_RPRASIGP_					0	0	0			REV__AluSq2_dup64|chr1:1468987-1469304:+|2.991366951907252|0.0058541083686269|9.0|63.0|1|1|sense	REV__AluSq2_dup64|chr1:1468987-1469304:+|2.991366951907252|0.0058541083686269|9.0|63.0|1|1|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.30279541015625	2	427.253769	852.492984	-0.71811	-0.00030681	0.40487	0.00017298	-0.31323	-0.00013383	427.25228033283736	68.566	0.18456	68.53	68.374	68.558	-0.036301					6	5	2	0	0	0	0.4196	1	6614	6614		50.025	7.5501	1	28785	+		49864	15391	33499	33512	56282	56282					0.06083757540000079
RPRCRRRRRRR	11	Unmodified	_RPRCRRRRRRR_					0	0	0		ENST00000447274.6_1_11:67056466-67056871:+|nuORF	ENST00000447274.6_1_11:67056466-67056871:+|nuORF	ENST00000447274.6_1_11:67056466-67056871:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7851867675781	4	406.752905	1622.98251	0.78441	0.00031906	0.52217	0.0002124	1.3066	0.00053146	407.00375082271535	32.167	0.68622	32.293	31.86	32.546	0.12643					20	15	2	0	0	0	0.18372	1	2209	2209		1.4188	1.1065	1	60225			49865	11846	33500	33513	56283	56283					0.19594031335623185
RPRCRRRRRRR	11	Unmodified	_RPRCRRRRRRR_					0	0	0		ENST00000447274.6_1_11:67056466-67056871:+|nuORF	ENST00000447274.6_1_11:67056466-67056871:+|nuORF	ENST00000447274.6_1_11:67056466-67056871:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7852478027344	4	406.752905	1622.98251	0.44772	0.00018211	0.86779	0.00035298	1.3155	0.00053509	406.7532246944227	32.017	0.34435	32.124	31.888	32.232	0.10707					12	7	2	0	0	0	0.1842	1	2209	2209		1.523	1.1825	1	89981			49866	11846	33500	33513	56284	56284					0.19594031335623185
RPRFLRIQDTI	11	Unmodified	_RPRFLRIQDTI_					0	0	0		nc|ENSG00000140284|O14975-2|SLC27A2;ENSG00000140284|ENST00000267842|SLC27A2	nc|ENSG00000140284|O14975-2|SLC27A2	nc|ENSG00000140284|O14975-2|SLC27A2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28668212890625	3	472.280765	1413.82047	-0.10758	-5.0807E-05	4.4623	0.0021075	4.3548	0.0020567	472.28219371015297	102	1.5292	102.02	101.36	102.89	0.01989					86	36	4	0	0	0	0.1767	1	10996	10996		30.569	17.061	1	299720			49867	4421	33501	33514	56285	56285					0.13010908291130363
RPRFLRIQDTI	11	Unmodified	_RPRFLRIQDTI_					0	0	0		nc|ENSG00000140284|O14975-2|SLC27A2;ENSG00000140284|ENST00000267842|SLC27A2	nc|ENSG00000140284|O14975-2|SLC27A2	nc|ENSG00000140284|O14975-2|SLC27A2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	472.280765	1413.82047	-0.87762	-0.00041448	5.6513	0.002669	4.7737	0.0022545	472.2831230881399	102.14	1.4617	102.14	101.28	102.75	0	0.23679	0.0019415	NaN	30.569	78	36	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	242740			49868	4421	33501	33514							0.13010908291130363
RPRFLRIQDTI	11	Unmodified	_RPRFLRIQDTI_					0	0	0		nc|ENSG00000140284|O14975-2|SLC27A2;ENSG00000140284|ENST00000267842|SLC27A2	nc|ENSG00000140284|O14975-2|SLC27A2	nc|ENSG00000140284|O14975-2|SLC27A2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	472.280765	1413.82047	1.7298	0.00081693	2.4584	0.0011611	4.1882	0.001978	472.6161482869797	101.47	0.77528	101.77	101.7	102.47	0.2999	-0.13498	-0.0025824	NaN	30.569	33	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	305690			49869	4421	33501	33514							0.13010908291130363
RPRFLRIQDTI	11	Unmodified	_RPRFLRIQDTI_					0	0	0		nc|ENSG00000140284|O14975-2|SLC27A2;ENSG00000140284|ENST00000267842|SLC27A2	nc|ENSG00000140284|O14975-2|SLC27A2	nc|ENSG00000140284|O14975-2|SLC27A2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	472.280765	1413.82047	1.9232	0.00090828	2.5599	0.001209	4.4831	0.0021173	472.28175843198176	101.59	0.92828	101.92	101.74	102.67	0.3251	0.017341	-0.0024385	NaN	30.569	37	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	510780			49870	4421	33501	33514							0.13010908291130363
RPRHCEGQG	9	Unmodified	_RPRHCEGQG_					0	0	0			REV__ENST00000344824.10_2_19:16178370-16178520:+|nuORF	REV__ENST00000344824.10_2_19:16178370-16178520:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.2546997070312	2	520.246149	1038.47774	-0.066325	-3.4505E-05	2.5899	0.0013474	2.5236	0.0013129	520.2473608714926	48.391	0.56339	49.296	49.043	49.607	0.90424					30	13	3	0	0	0	0.20789	1	4701	4701		26.693	0	1	1002500	+		49871	25308	33502	33515	56286	56286					-0.03995477319517704
RPRIRPRLKLK	11	Unmodified	_RPRIRPRLKLK_					0	0	0			REV__ENSG00000270765|ENST00000604641|GAS2L2	REV__ENSG00000270765|ENST00000604641|GAS2L2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.3237609863281	3	478.328161	1431.96265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.678	1	73.808	73.308	74.308	0.1292								0	0	0	0.56276	1	6776	6776		3.026	1.6072	1		+		49872	23979	33503	33516	56287	56287					0.26395165823964817
RPRIRPRLKLK	11	Unmodified	_RPRIRPRLKLK_					0	0	0			REV__ENSG00000270765|ENST00000604641|GAS2L2	REV__ENSG00000270765|ENST00000604641|GAS2L2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.3211364746094	3	478.328161	1431.96265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.509	1	74.636	74.136	75.136	0.12711								0	0	0	0.56276	1	6890	6890		5.6988	4.1758	1		+		49873	23979	33503	33516	56288	56288					0.26395165823964817
RPRIRPRLKLK	11	Unmodified	_RPRIRPRLKLK_					0	0	0			REV__ENSG00000270765|ENST00000604641|GAS2L2	REV__ENSG00000270765|ENST00000604641|GAS2L2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.32666015625	3	478.328161	1431.96265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.493	1	73.88	73.38	74.38	0.38779								0	0	0	0.56276	1	8250	8250		3.026	0.17417	1		+		49874	23979	33503	33516	56289	56289					0.26395165823964817
RPRKPQPPTG	10	Unmodified	_RPRKPQPPTG_					0	0	0			REV__ENSG00000149596|ENST00000372980|JPH2	REV__ENSG00000149596|ENST00000372980|JPH2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3303833007812	2	567.330539	1132.64652	-0.54401	-0.00030863	-0.26969	-0.00015301	-0.81371	-0.00046164	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.85958	1	8965	8965		15.642	1.5047	1	4477200	+		49875	20184	33504	33517	56290	56290					0.08550747585650242
RPRKPQPPTG	10	Unmodified	_RPRKPQPPTG_					0	0	0			REV__ENSG00000149596|ENST00000372980|JPH2	REV__ENSG00000149596|ENST00000372980|JPH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.330322265625	2	567.330539	1132.64652	-0.50942	-0.00028901	0.5149	0.00029212	0.0054817	3.1099E-06	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.86718	1	10798	10798		27.882	2.3082	1	5685000	+		49876	20184	33504	33517	56291	56291					0.08550747585650242
RPRKVTINAM	10	Unmodified	_RPRKVTINAM_					0	0	0			REV__nc|ENSG00000105289|O95049-5|TJP3	REV__nc|ENSG00000105289|O95049-5|TJP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3446655273438	2	593.347874	1184.6812	-1.311	-0.00077786	-4.4016	-0.0026117	-5.7125	-0.0033895	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.86471	1	10968	10968		30.318	9.3708	1	3957400	+		49877	17524	33505	33518	56292	56292					0.09624247402098263
RPRLARDV	8	Unmodified	_RPRLARDV_					0	0	0			REV__ENST00000396953.6_2_3:12882387-12882978:-|nuORF	REV__ENST00000396953.6_2_3:12882387-12882978:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.30059814453125	2	491.798875	981.583196	-1.9211	-0.00094481	-4.2589	-0.0020945	-6.18	-0.0030393	491.7967978123057	73.119	0.75326	73.161	72.514	73.267	0.042114					44	31	2	0	0	0	0.81897	1	7031	7031		20.947	1.587	1	96217	+		49878	26151	33506	33519	56293	56293					0.09166806868404365
RPRLEVVP	8	Unmodified	_RPRLEVVP_					0	0	0			REV__ENST00000361786.6_1_14:77564653-77564701:+|nuORF	REV__ENST00000361786.6_1_14:77564653-77564701:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2562561035156	2	483.298176	964.581799	0.79264	0.00038308	-1.265	-0.0006114	-0.47241	-0.00022832	483.2975055889025	35.882	0.74155	36.13	35.82	36.561	0.24769					30	18	2	0	0	0	0.4196	1	2779	2779		14.664	0	1	197830	+		49879	25511	33507	33520	56294	56294					0.09809172779648634
RPRLKGIELGL	11	Unmodified	_RPRLKGIELGL_					0	0	0			REV__ENST00000449707.5_1_2:219523523-219524103:-|nuORF	REV__ENST00000449707.5_1_2:219523523-219524103:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.39404296875	2	626.398422	1250.78229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.72	1	109.67	109.17	110.17	-0.052467								0	0	0	0.56276	1	11939	11939		20.947	0	1		+		49880	26858	33508	33521	56295	56295					0.16693022376466615
RPRLKIPK	8	Unmodified	_RPRLKIPK_					0	0	0			REV__ENSG00000147010|ENST00000397821|SH3KBP1	REV__ENSG00000147010|ENST00000397821|SH3KBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34527587890625	2	504.345461	1006.67637	0.11336	5.7171E-05	-0.44983	-0.00022687	-0.33648	-0.0001697	504.3451867946114	55.153	1.8423	55.554	54.023	55.866	0.40101					89	43	3	0	0	0	0.83058	1	5683	5683		12.959	0	1	1856800	+		49881	20045	33509	33522	56296	56296					0.17329731321638064
RPRLLSSA	8	Unmodified	_RPRLLSSA_					0	0	0			REV__ENST00000546421.1_1_12:98909108-98909923:-|nuORF	REV__ENST00000546421.1_1_12:98909108-98909923:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2743225097656	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.85277	1	9937	9937		25.45	0	1	47650000	+		49882	28537	33510	33523	56297	56297					0.08152313228515595
RPRLPEAH	8	Unmodified	_RPRLPEAH_					0	0	0		ENST00000331563.6_1_11:394491-396670:+|nuORF	ENST00000331563.6_1_11:394491-396670:+|nuORF	ENST00000331563.6_1_11:394491-396670:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.2790832519531	2	488.277775	974.540997	1.1896	0.00058087	-0.0091067	-4.4466E-06	1.1805	0.00057642	488.2776604919914	97.923	0.6183	98.299	97.956	98.574	0.37679					39	14	3	0	0	0	0.86791	1	11818	11818		28.254	0	1	417040			49883	10126	33511	33524	56298	56298					0.052708314600295125
RPRLRLGPAS	10	Unmodified	_RPRLRLGPAS_					0	0	0			REV__ENST00000234091.8_1_2:8819035-8819278:+|nuORF	REV__ENST00000234091.8_1_2:8819035-8819278:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	561.8456420898438	2	561.846356	1121.67816	-1.4136	-0.0007942	0.29387	0.00016511	-1.1197	-0.00062909	561.8463779100821	96.764	2.3842	96.966	96.53	98.914	0.20207					113	54	4	0	0	0	0.86763	1	9966	9966		26.693	1.1189	1	806770	+		49884	24208	33512	33525	56299	56299					0.12218740339585565
RPRLRPAR	8	Unmodified	_RPRLRPAR_					0	0	0		chr1:143382868-144245686|29|146.69|0.66|7.8|-|1|TE_info:MLT1H1,MLT1H1_dup139,ERVL-MaLR,LTR,acceptor,-,143382506,143382868|None,LINC02802|1;ENST00000457390.1_1:148932843-148933312:+|nuORF	chr1:143382868-144245686|29|146.69|0.66|7.8|-|1|TE_info:MLT1H1,MLT1H1_dup139,ERVL-MaLR,LTR,acceptor,-,143382506,143382868|None,LINC02802|1	chr1:143382868-144245686|29|146.69|0.66|7.8|-|1|TE_info:MLT1H1,MLT1H1_dup139,ERVL-MaLR,LTR,acceptor,-,143382506,143382868|None,LINC02802|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.327392578125	2	511.328134	1020.64171	0.7825	0.00040011	-2.7639	-0.0014132	-1.9814	-0.0010131	511.32659948169965	97.129	2.2022	97.292	96.878	99.081	0.16316					131	50	4	0	0	0	0.7961	1	10077	10077		17.365	0	1	1350400			49885	19	33513	33526	56300	56300					0.13221908233538215
RPRLRPARW	9	Unmodified	_RPRLRPARW_					0	0	0		chr1:143382868-144245686|29|146.69|0.66|7.8|-|1|TE_info:MLT1H1,MLT1H1_dup139,ERVL-MaLR,LTR,acceptor,-,143382506,143382868|None,LINC02802|1	chr1:143382868-144245686|29|146.69|0.66|7.8|-|1|TE_info:MLT1H1,MLT1H1_dup139,ERVL-MaLR,LTR,acceptor,-,143382506,143382868|None,LINC02802|1	chr1:143382868-144245686|29|146.69|0.66|7.8|-|1|TE_info:MLT1H1,MLT1H1_dup139,ERVL-MaLR,LTR,acceptor,-,143382506,143382868|None,LINC02802|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3663940429688	2	604.36779	1206.72103	2.3603	0.0014265	-4.2535	-0.0025707	-1.8932	-0.0011442	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.77546	1	12761	12761		31.955	0.42505	1	5984800			49886	19	33514	33527	56301	56301					0.12593555187686434
RPRLRPRA	8	Unmodified	_RPRLRPRA_					0	0	0			REV__ENST00000326925.10_1_3:49058876-49059380:+|nuORF	REV__ENST00000326925.10_1_3:49058876-49059380:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.327392578125	2	511.328134	1020.64171	0.7825	0.00040011	-2.7639	-0.0014132	-1.9814	-0.0010131	511.32659948169965	97.129	2.2022	97.292	96.878	99.081	0.16316					131	50	4	0	0	0	0.7961	1	10089	10089		17.365	0.66	1	1350400	+		49887	25083	33515	33528	56302	56302					0.13221908233538215
RPRMRPDS	8	Unmodified	_RPRMRPDS_					0	0	0		ENST00000407418.7_1_22:39261643-39261862:-|nuORF	ENST00000407418.7_1_22:39261643-39261862:-|nuORF	ENST00000407418.7_1_22:39261643-39261862:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2798767089844	2	507.766717	1013.51888	2.8612	0.0014528	-2.367	-0.0012019	0.49417	0.00025092	507.7653740839151	26.617	0.13651	26.277	26.186	26.323	-0.34035					4	2	2	0	0	0	0.4196	1	1478	1478		10.866	0	1	15615			49888	11286	33516	33529	56303	56303					0.012662837199627575
RPRNPLPG	8	Unmodified	_RPRNPLPG_					0	0	0			REV__ENST00000605386.1_1_12:90103665-90103764:+|nuORF	REV__ENST00000605386.1_1_12:90103665-90103764:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.7658996582031	2	453.767043	905.519533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.065	1	42.027	41.527	42.527	-0.038223								0	0	0	0.29353	1	3208	3208		28.254	0	1		+		49889	29361	33517	33530	56304	56304					0.0629944643133058
RPRNPLPG	8	Unmodified	_RPRNPLPG_					0	0	0			REV__ENST00000605386.1_1_12:90103665-90103764:+|nuORF	REV__ENST00000605386.1_1_12:90103665-90103764:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.76641845703125	2	453.767043	905.519533	-0.080965	-3.6739E-05	-1.8784	-0.00085237	-1.9594	-0.00088911	453.76626844051486	71.556	0.82278	72.106	71.742	72.565	0.55009					66	19	5	0	0	0	0.86791	1	8038	8038		28.254	0	1	758660	+		49890	29361	33517	33530	56305	56305					0.0629944643133058
RPRPGPEL	8	Unmodified	_RPRPGPEL_					0	0	0		ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4;ENST00000576972.5_1_16:67914666-67915321:+|nuORF	ENSG00000038358|ENST00000358933|EDC4	ENSG00000038358|ENST00000358933|EDC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.26556396484375	2	461.266876	920.519199	-0.62689	-0.00028916	-2.6359	-0.0012159	-3.2628	-0.001505	461.2655554991364	92.786	1.0453	93.236	92.861	93.907	0.44988					61	24	3	0	0	0	0.84341	1	11101	11101		24.203	3.7209	1	389140			49891	916	33518	33531	56306	56306					0.0557602671146924
RPRPKRGPG	9	Unmodified	_RPRPKRGPG_					0	0	0			REV__nc|ENSG00000198431|Q16881-3|TXNRD1	REV__nc|ENSG00000198431|Q16881-3|TXNRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8033142089844	2	510.812316	1019.61008	2.0738	0.0010593	-0.775	-0.00039588	1.2988	0.00066345	510.811728357041	106.1	0.82207	106.22	105.9	106.72	0.12742					79	35	3	0	0	0	0.62081	1	12974	12974		45.952	3.5558	1	1055000	+		49892	30148	33519	33532	56307	56307					0.10105915479607575
RPRPPGGLG	9	Unmodified	_RPRPPGGLG_					0	0	0		ENST00000535977.5_1_16:678431-678971:+|nuORF	ENST00000535977.5_1_16:678431-678971:+|nuORF	ENST00000535977.5_1_16:678431-678971:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.7651062011719	2	453.767043	905.519533	-0.098866	-4.4862E-05	-2.9209	-0.0013254	-3.0198	-0.0013703	453.7655359393201	41.096	0.91404	41.05	40.674	41.588	-0.045467					76	30	3	0	0	0	0.67235	1	2645	2645		42.474	5.3154	1	750830			49893	13435	33520	33533	56308	56308					0.0629944643133058
RPRPPGGLG	9	Unmodified	_RPRPPGGLG_					0	0	0		ENST00000535977.5_1_16:678431-678971:+|nuORF	ENST00000535977.5_1_16:678431-678971:+|nuORF	ENST00000535977.5_1_16:678431-678971:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.76666259765625	2	453.767043	905.519533	-0.080965	-3.6739E-05	-1.8784	-0.00085237	-1.9594	-0.00088911	453.76626844051486	71.556	0.82278	72.106	71.742	72.565	0.55009					66	19	5	0	0	0	0.69914	1	8012	8012		40.573	3.4135	1	758660			49894	13435	33520	33533	56309	56309					0.0629944643133058
RPRPRKPSFL	10	Unmodified	_RPRPRKPSFL_					0	0	0		ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;ENSG00000108846|ENST00000285238|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3;nc|ENSG00000108846|O15438-5|ABCC3	ENST00000502426.5_1_17:48736553-48755440:+|nuORF	ENST00000502426.5_1_17:48736553-48755440:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	627.383544921875	2	627.383106	1252.75166	-1.2001	-0.00075294	-0.45671	-0.00028653	-1.6568	-0.0010395	627.3827611804128	112.09	1.416	112.07	111.56	112.98	-0.01989					130	45	4	0	0	0	0.87326	1	12035	12035		13.454	0	1	42384000			49895	2436	33521	33534	56310	56310					0.13539288782089898
RPRPSPALPLL	11	Unmodified	_RPRPSPALPLL_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF	REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.8837280273438	2	608.879865	1215.74518	2.454	0.0014942	3.046	0.0018547	5.5	0.0033489	608.8814654512512	107.75	0.26207	107.85	107.67	107.93	0.10396					21	9	3	0	0	0	0.7342	1	13149	13149		25.574	0	1	6016400	+		49896	27945	33522	33535	56311	56311					0.14593350830705276
RPRPSPALPLL	11	Unmodified	_RPRPSPALPLL_					0	0	0			REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF	REV__ENST00000510085.1_2_5:81267901-81269112:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	608.879865	1215.74518	-0.43343	-0.0002639	8.509	0.005181	8.0756	0.0049171	609.3873369628758	107.84	0.24293	107.79	107.61	107.85	-0.042404	-0.03694	0.0080884	NaN	25.574	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	387150	+		49897	27945	33522	33535							0.14593350830705276
RPRPSVPHAS	10	Unmodified	_RPRPSVPHAS_					0	0	0		ENST00000529747.5_1_8:144917834-144918303:-|nuORF;ENST00000527545.1_1_8:144917834-144919303:-|nuORF	ENST00000529747.5_1_8:144917834-144918303:-|nuORF	ENST00000529747.5_1_8:144917834-144918303:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3063354492188	2	552.307064	1102.59957	-0.59209	-0.00032702	-0.41687	-0.00023024	-1.009	-0.00055726	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.86471	1	9200	9200		30.318	1.1477	1	1102700			49898	13289	33523	33536	56312	56312					0.052378880345031575
RPRPSVPHAS	10	Unmodified	_RPRPSVPHAS_					0	0	0		ENST00000529747.5_1_8:144917834-144918303:-|nuORF;ENST00000527545.1_1_8:144917834-144919303:-|nuORF	ENST00000529747.5_1_8:144917834-144918303:-|nuORF	ENST00000529747.5_1_8:144917834-144918303:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.306884765625	2	552.307064	1102.59957	0.7768	0.00042903	-1.8432	-0.001018	-1.0664	-0.00058896	552.3060097260034	92.551	2.2776	92.998	91.922	94.2	0.44661					137	53	3	0	0	0	0.86348	1	10969	10969		31.53	2.3598	1	579750			49899	13289	33523	33536	56313	56313					0.052378880345031575
RPRRKWEVFPG	11	Unmodified	_RPRRKWEVFPG_					0	0	0		ENSG00000204160|ENST00000374142|ZDHHC18	ENSG00000204160|ENST00000374142|ZDHHC18	ENSG00000204160|ENST00000374142|ZDHHC18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.60418701171875	3	476.605472	1426.79459	-0.99146	-0.00047254	2.7301	0.0013012	1.7387	0.00082867	476.6067836465766	15.938	0.19494	15.986	15.886	16.081	0.047803					20	8	3	0	0	0	0.76579	1	101	101		18.531	0.69791	1	121800			49900	8419	33524	33537	56314	56314					0.09826058839485086
RPRRLRRRWF	10	Unmodified	_RPRRLRRRWF_					0	0	0		ENST00000574110.5_1_19:30433210-30433438:+|nuORF	ENST00000574110.5_1_19:30433210-30433438:+|nuORF	ENST00000574110.5_1_19:30433210-30433438:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.3063049316406	3	500.307872	1497.90179	-0.052636	-2.6334E-05	-3.2897	-0.0016458	-3.3423	-0.0016722	500.30627502706477	16.612	0.66116	16.125	15.959	16.62	-0.48718					21	14	3	0	0	0	0.8573	1	161	161		16.007	2.4988	1	2208800			49901	14030	33525	33538	56315	56315					0.17275073564383092
RPRRQGLPG	9	Unmodified	_RPRRQGLPG_					0	0	0		ENST00000566635.5_1_15:28356911-28362639:-|nuORF;ENST00000568206.1_1_15:28362108-28362639:-|nuORF	ENST00000566635.5_1_15:28356911-28362639:-|nuORF	ENST00000566635.5_1_15:28356911-28362639:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8092651367188	2	518.809774	1035.60499	2.6223	0.0013605	-1.9341	-0.0010034	0.68822	0.00035706	518.808597891971	101.74	0.68322	102.06	101.69	102.37	0.32511					40	16	3	0	0	0	0.76996	1	12347	12347		33.516	1.5607	1	1650800			49902	13939	33526	33539	56316	56316					0.08861611616976006
RPRRQGLPG	9	Unmodified	_RPRRQGLPG_					0	0	0		ENST00000566635.5_1_15:28356911-28362639:-|nuORF;ENST00000568206.1_1_15:28362108-28362639:-|nuORF	ENST00000566635.5_1_15:28356911-28362639:-|nuORF	ENST00000566635.5_1_15:28356911-28362639:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	518.809774	1035.60499	3.1156	0.0016164	-1.7388	-0.00090208	1.3768	0.0007143	518.8087025961315	102.11	0.34102	102.06	101.88	102.22	-0.049828	0.064098	-0.0010135	NaN	33.516	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62284			49903	13939	33526	33539							0.08861611616976006
RPRRQGLPG	9	Unmodified	_RPRRQGLPG_					0	0	0		ENST00000566635.5_1_15:28356911-28362639:-|nuORF;ENST00000568206.1_1_15:28362108-28362639:-|nuORF	ENST00000566635.5_1_15:28356911-28362639:-|nuORF	ENST00000566635.5_1_15:28356911-28362639:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	518.809774	1035.60499	-0.2183	-0.00011325	1.198	0.00062152	0.97967	0.00050826	518.810242101817	101.7	0.54982	101.9	101.64	102.19	0.2058	-0.09417	0.0020337	NaN	33.516	23	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153830			49904	13939	33526	33539							0.08861611616976006
RPRRQGLPG	9	Unmodified	_RPRRQGLPG_					0	0	0		ENST00000566635.5_1_15:28356911-28362639:-|nuORF;ENST00000568206.1_1_15:28362108-28362639:-|nuORF	ENST00000566635.5_1_15:28356911-28362639:-|nuORF	ENST00000566635.5_1_15:28356911-28362639:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	518.809774	1035.60499	-1.5538	-0.0008061	2.6714	0.0013859	1.1176	0.00057984	518.8109444625287	101.83	0.5938	101.98	101.65	102.24	0.15504	-0.011709	0.0035626	NaN	33.516	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149750			49905	13939	33526	33539							0.08861611616976006
RPRRQGLPG	9	Unmodified	_RPRRQGLPG_					0	0	0		ENST00000566635.5_1_15:28356911-28362639:-|nuORF;ENST00000568206.1_1_15:28362108-28362639:-|nuORF	ENST00000566635.5_1_15:28356911-28362639:-|nuORF	ENST00000566635.5_1_15:28356911-28362639:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	518.809774	1035.60499	2.1115	0.0010955	-1.3321	-0.0006911	0.7794	0.00040436	518.8089210581584	101.71	0.75056	101.97	101.6	102.35	0.26322	-0.025274	-0.00059148	NaN	33.516	43	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1530100			49906	13939	33526	33539							0.08861611616976006
RPRRRDPRRRR	11	Unmodified	_RPRRRDPRRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	nc|ENSG00000251359|Q96NR7|WWC2-AS2	nc|ENSG00000251359|Q96NR7|WWC2-AS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3292236328125	3	526.324584	1575.95192	-0.10918	-5.7462E-05	1.5967	0.00084039	1.4875	0.00078293	526.3253457782059	108.92	1.0597	109.05	108.28	109.34	0.13026					52	28	2	0	0	0	0.89497	1	11700	11700		3.026	1.503	1	2107400			49907	14079	33527	33540	56317	56317					0.18698576222232077
RPRRRDPRRRR	11	Unmodified	_RPRRRDPRRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	nc|ENSG00000251359|Q96NR7|WWC2-AS2	nc|ENSG00000251359|Q96NR7|WWC2-AS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.6600341796875	3	526.324584	1575.95192	2.5072	0.0013196	-1.6509	-0.0008689	0.85627	0.00045068	526.3235712545239	107.86	0.16271	107.95	107.85	108.01	0.084457					11	4	3	0	0	0	0.77803	2	13155	13155;13163		15.921	6.2745	1	5449200			49908	14079	33527	33540	56318;56319	56318					0.18698576222232077
RPRRRDPRRRR	11	Unmodified	_RPRRRDPRRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	nc|ENSG00000251359|Q96NR7|WWC2-AS2	nc|ENSG00000251359|Q96NR7|WWC2-AS2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	526.324584	1575.95192	-0.037353	-1.966E-05	0.10582	5.5695E-05	0.068466	3.6035E-05	526.3245006649389	107.91	0.23258	107.87	107.69	107.93	-0.042404	-0.048387	0.00016132	NaN	15.921	20	5	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54806000			49909	14079	33527	33540							0.18698576222232077
RPRRRDPRRRR	11	Unmodified	_RPRRRDPRRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	nc|ENSG00000251359|Q96NR7|WWC2-AS2	nc|ENSG00000251359|Q96NR7|WWC2-AS2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	526.324584	1575.95192	3.2601	0.0017159	-2.5321	-0.0013327	0.72796	0.00038314	526.3231090354204	107.89	0.2337	107.86	107.68	107.92	-0.031487	-0.05285	-0.0040039	NaN	15.921	20	5	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68920000			49910	14079	33527	33540							0.18698576222232077
RPRRRDPRRRR	11	Unmodified	_RPRRRDPRRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	nc|ENSG00000251359|Q96NR7|WWC2-AS2	nc|ENSG00000251359|Q96NR7|WWC2-AS2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	526.324584	1575.95192	-0.10705	-5.6342E-05	0.50934	0.00026808	0.40229	0.00021174	526.3246980470478	107.84	0.5009	107.98	107.53	108.03	0.13866	0.061725	0.00079847	NaN	15.921	35	12	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99778000			49911	14079	33527	33540							0.18698576222232077
RPRRRDPRRRR	11	Unmodified	_RPRRRDPRRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	nc|ENSG00000251359|Q96NR7|WWC2-AS2	nc|ENSG00000251359|Q96NR7|WWC2-AS2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	526.324584	1575.95192	0.82851	0.00043607	0.30066	0.00015825	1.1292	0.00059431	526.3245568900558	107.88	0.34233	107.96	107.67	108.01	0.084412	0.04392	0.00046898	NaN	15.921	27	8	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120850000			49912	14079	33527	33540							0.18698576222232077
RPRRRDPRRRR	11	Unmodified	_RPRRRDPRRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	nc|ENSG00000251359|Q96NR7|WWC2-AS2	nc|ENSG00000251359|Q96NR7|WWC2-AS2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	526.324584	1575.95192	-1.5293	-0.00080488	2.8342	0.0014917	1.3049	0.0006868	526.3259395927222	107.88	0.22264	107.92	107.75	107.97	0.036125	0.0023544	0.0044693	NaN	15.921	23	5	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89505000			49913	14079	33527	33540							0.18698576222232077
RPRRRDPRRRR	11	Unmodified	_RPRRRDPRRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	nc|ENSG00000251359|Q96NR7|WWC2-AS2	nc|ENSG00000251359|Q96NR7|WWC2-AS2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	526.324584	1575.95192	4.9789	0.0026205	-3.7149	-0.0019552	1.264	0.00066528	526.3222846142238	107.86	0.15526	107.97	107.88	108.04	0.11715	0.057743	-0.0058715	NaN	15.921	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5707100			49914	14079	33527	33540							0.18698576222232077
RPRRRGARSL	10	Unmodified	_RPRRRGARSL_					0	0	0			REV__ENST00000505521.1_1_5:177019227-177019656:+|nuORF	REV__ENST00000505521.1_1_5:177019227-177019656:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	613.3854370117188	2	612.879053	1223.74355	1.1743	0.00071971	-0.36763	-0.00022531	0.80668	0.00049439	612.878611922605	104.31	3.5817	104.48	103.81	107.39	0.17096					311	89	7	0	0	0	0.86047	1	11245	11245		23.523	2.5758	1	83708000	+		49915	27883	33528	33541	56320	56320					0.140631545853239
RPRRRLRRRR	10	Unmodified	_RPRRRLRRRR_					0	0	0			REV__ENSG00000183579|ENST00000544604|ZNRF3	REV__ENSG00000183579|ENST00000544604|ZNRF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.3232727050781	3	493.326037	1476.95628	-0.74412	-0.0003671	-3.8733	-0.0019108	-4.6174	-0.0022779	493.32385448988566	15.851	0.19926	15.899	15.788	15.987	0.047803					18	7	3	0	0	0	0.85285	1	94	94		16.717	4.5107	1	123360	+		49916	22615	33529	33542	56321	56321					0.23688085435787798
RPRRRLRRRR	10	Unmodified	_RPRRRLRRRR_					0	0	0			REV__ENSG00000183579|ENST00000544604|ZNRF3	REV__ENSG00000183579|ENST00000544604|ZNRF3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	493.326037	1476.95628	0.74868	0.00036935	-5.5086	-0.0027175	-4.7599	-0.0023482	493.3230187305912	15.972	0.18799	15.948	15.858	16.046	-0.024035	0.024583	-0.0014754	NaN	16.717	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181290	+		49917	22615	33529	33542							0.23688085435787798
RPRRRRRRRQE	11	Unmodified	_RPRRRRRRRQE_					0	0	0		ENST00000514738.5_1_5:31193871-31267519:+|nuORF	ENST00000514738.5_1_5:31193871-31267519:+|nuORF	ENST00000514738.5_1_5:31193871-31267519:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.8790588378906	4	406.250623	1620.97339	0.012694	5.1569E-06	-2.2828	-0.00092739	-2.2701	-0.00092224	406.2491958966604	18.324	0.099823	18.391	18.328	18.428	0.066298					6	4	2	0	0	0	0.18331	1	325	325		3.026	0	1	43485			49918	13070	33530	33543	56322	56322					0.18773961250963112
RPRRRRRRRQE	11	Unmodified	_RPRRRRRRRQE_					0	0	0		ENST00000514738.5_1_5:31193871-31267519:+|nuORF	ENST00000514738.5_1_5:31193871-31267519:+|nuORF	ENST00000514738.5_1_5:31193871-31267519:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.8790588378906	4	406.250623	1620.97339	0.45786	0.000186	2.1143	0.00085892	2.5721	0.0010449	406.2514092765346	18.336	0.2203	18.312	18.223	18.443	-0.024033					11	8	2	0	0	0	0.18318	1	319	319		3.2113	1.6883	1	60085			49919	13070	33530	33543	56323	56323					0.18773961250963112
RPRRVQQTG	9	Unmodified	_RPRRVQQTG_					0	0	0		ENST00000337120.9_2_16:28875193-28875472:+|nuORF	ENST00000337120.9_2_16:28875193-28875472:+|nuORF	ENST00000337120.9_2_16:28875193-28875472:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3176879882812	2	549.317963	1096.62137	-1.4544	-0.00079891	0.85454	0.00046941	-0.59983	-0.0003295	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.7932	1	10530	10530		26.693	2.1737	1	2310400			49920	10182	33531	33544	56324	56324					0.0769269278309821
RPRSGLGAS	9	Unmodified	_RPRSGLGAS_					0	0	0			REV__ENST00000554467.5_1_12:57626939-57627538:+|nuORF	REV__ENST00000554467.5_1_12:57626939-57627538:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7544250488281	2	450.754133	899.493713	-0.14159	-6.3823E-05	0.143	6.4458E-05	0.0014091	6.3515E-07	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.7932	1	7795	7795		25.45	1.2474	1	109620	+		49921	28664	33532	33545	56325	56325					0.039945521890558666
RPRSRERQRRA	11	Unmodified	_RPRSRERQRRA_					0	0	0			REV__ENST00000378700.7_2_6:19837725-19837965:+|nuORF	REV__ENST00000378700.7_2_6:19837725-19837965:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.9544982910156	3	489.954046	1466.84031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.609	1	62.632	62.132	63.132	0.022984								0	0	0	0.56276	1	5462	5462		23.378	0.81632	1		+		49922	25904	33533	33546	56326	56326					0.12556097074457284
RPRTCVRLRTR	11	Unmodified	_RPRTCVRLRTR_					0	0	0			REV__ENST00000305544.8_1_3:49168389-49168452:-|nuORF	REV__ENST00000305544.8_1_3:49168389-49168452:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.9515380859375	3	471.949244	1412.8259	3.0904	0.0014585	1.9636	0.00092672	5.054	0.0023852	471.9501713198561	105.03	0.67872	105.26	105.01	105.69	0.2268					36	16	4	0	0	0	0.77803	1	12847	12847		15.921	0	1	295370	+		49923	24817	33534	33547	56327	56327					0.13600308601917277
RPRTSGIPG	9	Unmodified	_RPRTSGIPG_					0	0	0		chr3:75630201-75658836|20|16.55|0.58|4.85|-|1|RPL23AP49,None|2	chr3:75630201-75658836|20|16.55|0.58|4.85|-|1|RPL23AP49,None|2	chr3:75630201-75658836|20|16.55|0.58|4.85|-|1|RPL23AP49,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76666259765625	2	470.769783	939.525013	-0.26514	-0.00012482	-1.518	-0.00071462	-1.7831	-0.00083944	470.76915813148867	64.797	1.286	65.183	64.351	65.637	0.38615					55	30	2	0	0	0	0.76255	1	7040	7040		35.618	1.4457	1	115640			49924	408	33535	33548	56328	56328					0.05283125223149909
RPRVAKVY	8	Unmodified	_RPRVAKVY_					0	0	0			REV__ENST00000481597.5_1_3:50356335-50357944:-|nuORF	REV__ENST00000481597.5_1_3:50356335-50357944:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.8054504394531	2	494.806168	987.597784	-0.45163	-0.00022347	-1.0768	-0.00053283	-1.5285	-0.0007563	494.8055403837129	78.739	1.1015	79.15	78.592	79.694	0.4106					45	25	2	0	0	0	0.84634	1	8982	8982		60.294	0	1	669360	+		49925	16551	33536	33549	56329	56329					0.10348879016555657
RPRVGLGTG	9	Unmodified	_RPRVGLGTG_					0	0	0		ENST00000492581.5_1_22:21067427-21075805:-|nuORF	ENST00000492581.5_1_22:21067427-21075805:-|nuORF	ENST00000492581.5_1_22:21067427-21075805:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7725830078125	2	456.772326	911.530098	-1.5287	-0.00069828	1.2575	0.00057438	-0.27125	-0.0001239	456.77292963947184	89.845	2.4068	90.316	88.994	91.401	0.47068					69	60	2	0	0	0	0.71772	1	10632	10632		39.253	0	1	1003600			49926	12705	33537	33550	56330	56330					0.07079429085763422
RPRVLTGN	8	Unmodified	_RPRVLTGN_					0	0	0		ENST00000573763.1_1_17:1675146-1678370:+|nuORF;ENSG00000132386|ENST00000254722|SERPINF1	ENST00000573763.1_1_17:1675146-1678370:+|nuORF	ENST00000573763.1_1_17:1675146-1678370:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7724914550781	2	456.772326	911.530098	-1.1318	-0.00051697	1.567	0.00071576	0.43521	0.00019879	456.7727770907754	90.264	1.662	90.264	89.603	91.265	0					93	38	4	0	0	0	0.87064	1	8806	8806		29.15	0	1	669440			49927	3791	33538	33551	56331	56331					0.07079429085752054
RPRVPSGG	8	Unmodified	_RPRVPSGG_					0	0	0		ENST00000478438.5_1_6:31994951-31995218:+|nuORF	ENST00000478438.5_1_6:31994951-31995218:+|nuORF	ENST00000478438.5_1_6:31994951-31995218:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2372131347656	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.87479	2	6867	6867;7036		31.955	1.4512	1	2012200			49928	12390	33539	33552	56332;56333	56332					0.04243184505912723
RPRVQSTT	8	Unmodified	_RPRVQSTT_					0	0	0			REV__ENSG00000163737|ENST00000296029|PF4	REV__ENSG00000163737|ENST00000296029|PF4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7673645019531	2	472.76724	943.519927	-1.1355	-0.00053681	1.1341	0.00053614	-0.0014011	-6.6241E-07	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.87922	1	8060	8060		31.955	1.4512	1	292450	+		49929	17754	33540	33553	56334	56334					0.045908213605116543
RPRVTPSD	8	Unmodified	_RPRVTPSD_					0	0	0			REV__ENST00000342115.8_1_1:110162494-110162731:+|nuORF	REV__ENST00000342115.8_1_1:110162494-110162731:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.253173828125	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.90465	1	8648	8648		40.573	0	1	1673200	+		49930	25268	33541	33554	56335	56335					0.027191324691784757
RPSCPYSPHCE	11	Unmodified	_RPSCPYSPHCE_					0	0	0		nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	638.265625	2	638.26589	1274.51723	0.48196	0.00030762	-1.2152	-0.00077562	-0.73324	-0.000468	638.2649310823937	27.073	0.42839	27.114	26.875	27.304	0.040834					32	13	3	0	0	0	0.7144	1	1201	1201		29.17	3.596	1	80064			49931	14968	33542	33555	56336	56336					-0.1090513815097438
RPSCPYSPHCE	11	Unmodified	_RPSCPYSPHCE_					0	0	0		nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	638.2654418945312	2	638.26589	1274.51723	1.102	0.00070339	-1.8927	-0.001208	-0.79065	-0.00050464	638.2644750738586	27.423	0.57544	27.395	27.112	27.687	-0.027706					30	13	4	0	0	0	0.61369	1	1243	1243		42.864	17.29	1	85313			49932	14968	33542	33555	56337	56337					-0.1090513815097438
RPSCPYSPHCE	11	Unmodified	_RPSCPYSPHCE_					0	0	0		nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	638.26589	1274.51723	-1.0901	-0.00069577	0.51677	0.00032983	-0.57333	-0.00036594	638.2657616928885	27.288	0.30785	27.288	27.15	27.458	0	-0.0067836	0.0025028	NaN	42.864	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49242			49933	14968	33542	33555							-0.1090513815097438
RPSCPYSPHCE	11	Unmodified	_RPSCPYSPHCE_					0	0	0		nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	638.26589	1274.51723	1.411	0.00090062	-2.3397	-0.0014933	-0.92861	-0.0005927	638.2641355609488	27.4	0.35592	27.469	27.288	27.643	0.068678	0.17393	-0.0011435	NaN	42.864	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64502			49934	14968	33542	33555							-0.1090513815097438
RPSCPYSPHCE	11	Unmodified	_RPSCPYSPHCE_					0	0	0		nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	638.26589	1274.51723	1.0028	0.00064003	-2.0963	-0.001338	-1.0935	-0.00069796	638.2643059050033	27.07	0.35224	27.098	26.931	27.284	0.02817	-0.19623	-0.00083289	NaN	42.864	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91763			49935	14968	33542	33555							-0.1090513815097438
RPSCPYSPHCE	11	Unmodified	_RPSCPYSPHCE_					0	0	0		nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	nc|ENSG00000142046|Q6ZNR0-5|TMEM91	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	638.26589	1274.51723	-0.47996	-0.00030635	-0.7465	-0.00047647	-1.2265	-0.00078281	638.2655291733793	27.659	0.43629	27.562	27.36	27.796	-0.096945	0.26733	0.00089017	NaN	42.864	23	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	297100			49936	14968	33542	33555							-0.1090513815097438
RPSCVLRRLPL	11	Unmodified	_RPSCVLRRLPL_					0	0	0		ENST00000274811.8_1_5:175959512-175964241:-|nuORF	ENST00000274811.8_1_5:175959512-175964241:-|nuORF	ENST00000274811.8_1_5:175959512-175964241:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26806640625	3	437.267691	1308.78124	1.1666	0.00051013	-1.0571	-0.00046224	0.10952	4.7889E-05	437.26715109542596	51.001	1.6388	51.753	50.881	52.52	0.75174					116	39	4	0	0	0	0.74022	1	5036	5036		24.232	1.6702	1	3280800			49937	9592	33543	33556	56338	56338					0.139204847359224
RPSGGNHD	8	Unmodified	_RPSGGNHD_					0	0	0			REV__ENSG00000065371|ENST00000405845|ROPN1	REV__ENSG00000065371|ENST00000405845|ROPN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1907043457031	2	420.191365	838.368178	-0.017504	-7.3551E-06	0.10202	4.2869E-05	0.084518	3.5514E-05	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.93293	1	11161	11161		51.335	5.3835	1	4147200	+		49938	16498	33544	33557	56339	56339					-0.057471596671916814
RPSGRGRRGQ	10	Unmodified	_RPSGRGRRGQ_					0	0	0		ENST00000420167.6_1_12:110007871-110011277:-|nuORF;ENST00000540016.5_1_12:109994935-110011292:-|nuORF	ENST00000420167.6_1_12:110007871-110011277:-|nuORF	ENST00000420167.6_1_12:110007871-110011277:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	563.8162231445312	2	563.818661	1125.62277	0.35972	0.00020282	-3.504	-0.0019756	-3.1443	-0.0017728	563.8168428639851	53.745	1.0519	53.792	53.268	54.32	0.047802					46	35	2	0	0	0	0.86348	1	4415	4415		31.53	1.2121	1	151030			49939	11447	33545	33558	56340	56340					0.0649832687183789
RPSIAPVLEV	10	Unmodified	_RPSIAPVLEV_					0	0	0		nc|ENSG00000162687|Q6UVM3-4|KCNT2;ENST00000610076.1_1_1:196227273-196577439:-|nuORF;nc|ENSG00000162687|Q6UVM3-3|KCNT2;nc|ENSG00000162687|Q6UVM3-2|KCNT2;ENSG00000162687|ENST00000294725|KCNT2;ENST00000498426.5_1_1:196286396-196434478:-|nuORF	nc|ENSG00000162687|Q6UVM3-4|KCNT2	nc|ENSG00000162687|Q6UVM3-4|KCNT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.8236083984375	2	540.824224	1079.63389	-1.2662	-0.0006848	1.3835	0.00074824	0.11731	6.3442E-05	540.8247382422055	30.943	2.0454	31.023	30.325	32.37	0.079834					106	46	3	0	0	0	0.44803	1	2056	2056		60.118	3.6845	1	213150			49940	5716	33546	33559	56341	56341					0.09726291402762399
RPSLGGRG	8	Unmodified	_RPSLGGRG_					0	0	0			REV__ENST00000397861.6_1_17:54910471-54911016:-|nuORF	REV__ENST00000397861.6_1_17:54910471-54911016:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.22802734375	2	400.230294	798.446034	-1.8752	-0.0007505	-2.6209	-0.001049	-4.4961	-0.0017995	400.22927707495484	54.825	2.6613	54.881	53.254	55.915	0.055611					132	91	2	0	0	0	0.87064	1	4533	4533		29.15	0	1	1098100	+		49941	26182	33547	33560	56342	56342					0.03874897988862358
RPSLKFLLYT	10	Unmodified	_RPSLKFLLYT_					0	0	0			REV__ENST00000442856.1_1_16:79338-84879:-|nuORF;REV__nc|ENSG00000292373|Q01113-3|IL9R	REV__ENST00000442856.1_1_16:79338-84879:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.371337890625	2	619.368798	1236.72304	2.9405	0.0018212	2.8596	0.0017711	5.8001	0.0035924	619.3710459342678	101.7	2.0362	101.65	101.12	103.16	-0.049828					124	48	5	0	0	0	0.8651	1	11056	11056		25.574	0	1	3045300	+		49942	18580;30306	33548	33561	56343	56343					0.11415126362271621
RPSLKFLLYT	10	Unmodified	_RPSLKFLLYT_					0	0	0			REV__ENST00000442856.1_1_16:79338-84879:-|nuORF;REV__nc|ENSG00000292373|Q01113-3|IL9R	REV__ENST00000442856.1_1_16:79338-84879:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3722534179688	2	619.368798	1236.72304	3.0782	0.0019065	1.4411	0.00089258	4.5193	0.0027991	619.8710459081657	101.29	0.9677	101.61	101.32	102.29	0.32511					61	26	3	0	0	0	0.86348	1	12325	12325		31.53	3.4483	1	2930100	+		49943	18580;30306	33548	33561	56344	56344					0.11415126362271621
RPSLLPAPGL	10	Unmodified	_RPSLLPAPGL_					0	0	0			REV__ENSG00000176428|ENST00000324941|VPS37D	REV__ENSG00000176428|ENST00000324941|VPS37D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.81353759765625	2	510.813659	1019.61277	-0.053582	-2.7371E-05	1.033	0.00052767	0.97942	0.0005003	510.81277149178777	80.826	1.111	81.247	80.721	81.832	0.4215					79	26	4	0	0	0	0.82886	1	9317	9317		37.812	2.1932	1	1491100	+		49944	22126	33549	33562	56345	56345					0.10374326093892705
RPSPRRAASAG	11	Unmodified	_RPSPRRAASAG_					0	0	0		ENST00000508647.5_1_5:177558258-177563036:+|nuORF;ENST00000507457.5_1_5:177558210-177565175:+|nuORF	ENST00000508647.5_1_5:177558258-177563036:+|nuORF	ENST00000508647.5_1_5:177558258-177563036:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	563.3131713867188	2	563.31542	1124.61629	-1.0735	-0.0006047	2.9961	0.0016877	1.9226	0.001083	563.8174777116847	55.775	1.0022	55.775	55.238	56.24	0					49	27	4	0	0	0	0.68431	1	4784	4784		34.087	4.9164	1	74923			49945	12957	33550	33563	56346	56346					0.05896388920473328
RPSPRRAASAG	11	Unmodified	_RPSPRRAASAG_					0	0	0		ENST00000508647.5_1_5:177558258-177563036:+|nuORF;ENST00000507457.5_1_5:177558210-177565175:+|nuORF	ENST00000508647.5_1_5:177558258-177563036:+|nuORF	ENST00000508647.5_1_5:177558258-177563036:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	563.31542	1124.61629	0.37068	0.00020881	2.2858	0.0012876	2.6565	0.0014964	563.3164352962	54.994	0.58839	55.562	55.195	55.783	0.56836	-0.18377	-0.00083761	NaN	34.087	21	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119080			49946	12957	33550	33563							0.05896388920473328
RPSPSLPEP	9	Unmodified	_RPSPSLPEP_					0	0	0		ENST00000525088.5_1_11:67202187-67202637:+|nuORF;ENSG00000175634|ENST00000312629|RPS6KB2	ENST00000525088.5_1_11:67202187-67202637:+|nuORF	ENST00000525088.5_1_11:67202187-67202637:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2156677246094	2	490.263999	978.513445	0.40045	0.00019633	1.4346	0.00070332	1.835	0.00089964	490.2659589468611	29.43	0.25631	29.341	29.148	29.404	-0.089544					7	5	2	0	0	0	0.20789	1	1857	1857		16.473	0	1	37548			49947	13229	33551	33564	56347	56347					0.02332883409144415
RPSQPVGH	8	Unmodified	_RPSQPVGH_					0	0	0			REV__ENST00000525711.1_1_11:122526528-122598239:+|nuORF	REV__ENST00000525711.1_1_11:122526528-122598239:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2350158691406	2	439.235576	876.456599	1.5554	0.00068317	-1.3212	-0.00058033	0.23414	0.00010284	439.23488920789083	27.555	0.97632	27.3	27.034	28.01	-0.25465					49	22	4	0	0	0	0.91005	1	1619	1619		42.474	0	1	767500	+		49948	24626	33552	33565	56348	56348					0.013428806432898455
RPSRKKRRRRP	11	Unmodified	_RPSRKKRRRRP_					0	0	0		ENST00000296490.7_1_3:52312489-52312597:-|nuORF	ENST00000296490.7_1_3:52312489-52312597:-|nuORF	ENST00000296490.7_1_3:52312489-52312597:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.3223876953125	3	498.322181	1491.94471	-1.5014	-0.00074816	0.83713	0.00041716	-0.66424	-0.00033101	498.322475094846	50.129	1.802	50.129	48.892	50.694	0					100	42	3	0	0	0	0.89497	1	3949	3949		3.026	0	1	141070			49949	9736	33553	33566	56349	56349					0.21841843621791668
RPSRTVQPKVA	11	Unmodified	_RPSRTVQPKVA_					0	0	0			REV__ENST00000602918.1_1_12:123849997-123850138:+|nuORF	REV__ENST00000602918.1_1_12:123849997-123850138:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8695678710938	2	619.870028	1237.7255	-0.18236	-0.00011304	-0.59862	-0.00037106	-0.78097	-0.0004841	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.7434	1	9713	9713		23.523	1.5628	1	2627900	+		49950	29339	33554	33567	56350	56350					0.11614974819940471
RPSSLRTQ	8	Unmodified	_RPSSLRTQ_					0	0	0		ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1;nc|ENSG00000008226|Q9Y238-2|DLEC1;ENST00000440294.6_1_3:38080716-38136583:+|nuORF	ENSG00000008226|ENST00000308059|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7674255371094	2	472.76724	943.519927	-0.41041	-0.00019403	0.54101	0.00025577	0.1306	6.1745E-05	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.90523	1	8521	8521		40.778	5.1599	1	590200			49951	737	33555	33568	56351	56351					0.04590821360534392
RPSSPSYSP	9	Unmodified	_RPSSPSYSP_					0	0	0			REV__nc|ENSG00000181222|P24928|POLR2A	REV__nc|ENSG00000181222|P24928|POLR2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.23529052734375	2	489.237981	976.461409	-1.3472	-0.00065908	-1.2202	-0.00059695	-2.5673	-0.001256	489.23722869031667	63.74	1.1993	63.74	63.341	64.54	0					123	57	3	0	0	0	0.78536	1	5634	5634		29.15	2.4566	1	324370	+		49952	22447	33556	33569	56352	56352					-0.02776280004616183
RPSVPRGG	8	Unmodified	_RPSVPRGG_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.23785400390625	2	413.238119	824.461684	-1.33	-0.0005496	2.1463	0.00088694	0.81635	0.00033735	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.90465	2	7109	6954;7109		42.474	1.9018	1	895630	+		49953	20602	33557	33570	56353;56354	56354					0.04243184505912723
RPSVPRGG	8	Unmodified	_RPSVPRGG_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.23712158203125	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.85277	4	7270	7179;7261;7270;7313		38.806	6.5047	1	1747900	+		49954	20602	33557	33570	56355;56356;56357;56358	56357					0.04243184505912723
RPSVPRGG	8	Unmodified	_RPSVPRGG_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2379150390625	2	413.238119	824.461684	-0.12335	-5.0972E-05	0.56146	0.00023202	0.43812	0.00018105	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.85277	3	7520	7345;7497;7520		57.811	20.783	1	1978800	+		49955	20602	33557	33570	56359;56360;56361	56361					0.04243184505912723
RPSVPRGG	8	Unmodified	_RPSVPRGG_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2374572753906	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.87922	3	7228	7228;7257;7410		50.025	18.07	1	2127000	+		49956	20602	33557	33570	56362;56363;56364	56362					0.04243184505912723
RPSVPRGG	8	Unmodified	_RPSVPRGG_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2375183105469	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.87479	2	6993	6983;6993		38.806	13.356	1	2012200	+		49957	20602	33557	33570	56365;56366	56366					0.04243184505912723
RPSVPRGG	8	Unmodified	_RPSVPRGG_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2372741699219	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.84341	7	6985	6860;6895;6912;6985;7007;7036;7158		40.573	6.0902	1	1692300	+		49958	20602	33557	33570	56367;56368;56369;56370;56371;56372;56373	56370					0.04243184505912723
RPSVPRGG	8	Unmodified	_RPSVPRGG_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2373962402344	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.87479	10	6878	6878;6909;6920;6952;6974;6982;7052;7093;7118;7458		40.573	10.069	1	1341700	+		49959	20602	33557	33570	56374;56375;56376;56377;56378;56379;56380;56381;56382;56383	56374					0.04243184505912723
RPSVPRGG	8	Unmodified	_RPSVPRGG_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2376708984375	2	413.238119	824.461684	0.89927	0.00037161	-0.73723	-0.00030465	0.16205	6.6964E-05	413.23775271826133	77.246	5.6199	77.651	75.794	81.414	0.40531					207	140	2	0	0	0	0.87922	1	8847	8847		31.955	0	1	1083000	+		49960	20602	33557	33570	56384	56384					0.04243184505912723
RPSVPRGG	8	Unmodified	_RPSVPRGG_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.238037109375	2	413.238119	824.461684	-0.091267	-3.7715E-05	0.27761	0.00011472	0.18635	7.7005E-05	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.88915	1	8679	8679		35.201	3.2459	1	1247200	+		49961	20602	33557	33570	56385	56385					0.04243184505912723
RPSVRCLRPIL	11	Unmodified	_RPSVRCLRPIL_					0	0	0		ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2679748535156	3	437.267691	1308.78124	-1.7045	-0.00074531	2.1603	0.00094462	0.45581	0.00019931	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.76892	1	4238	4238		17.833	0.6664	1	3449100			49962	10085	33558	33571	56386	56386					0.13920484735899663
RPSVRCLRPIL	11	Unmodified	_RPSVRCLRPIL_					0	0	0		ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.267822265625	3	437.267691	1308.78124	-0.071191	-3.113E-05	0.51869	0.00022681	0.4475	0.00019568	437.26780944414276	51.727	2.0957	51.725	51.092	53.187	-0.0020447					185	52	4	0	0	0	0.75121	1	4481	4481		21.78	3.2494	1	3270700			49963	10085	33558	33571	56387	56387					0.13920484735899663
RPSVRCLRPIL	11	Unmodified	_RPSVRCLRPIL_					0	0	0		ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2678527832031	3	437.267691	1308.78124	-0.73822	-0.0003228	1.1348	0.00049623	0.39662	0.00017343	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.77205	1	4566	4566		17.167	0	1	3639500			49964	10085	33558	33571	56388	56388					0.13920484735899663
RPSVRCLRPIL	11	Unmodified	_RPSVRCLRPIL_					0	0	0		ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2677917480469	3	437.267691	1308.78124	-1.575	-0.00068869	2.0109	0.00087928	0.43587	0.00019059	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.67762	1	3926	3926		35.178	3.544	1	3429700			49965	10085	33558	33571	56389	56389					0.13920484735899663
RPSVRCLRPIL	11	Unmodified	_RPSVRCLRPIL_					0	0	0		ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26776123046875	3	437.267691	1308.78124	-1.5729	-0.00068777	2.064	0.00090252	0.49113	0.00021475	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.76892	1	4145	4145		17.833	0	1	4358700			49966	10085	33558	33571	56390	56390					0.13920484735899663
RPSVRCLRPIL	11	Unmodified	_RPSVRCLRPIL_					0	0	0		ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2679443359375	3	437.267691	1308.78124	0.31383	0.00013723	-0.024697	-1.0799E-05	0.28913	0.00012643	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.76579	1	4418	4418		18.531	1.3643	1	2521600			49967	10085	33558	33571	56391	56391					0.13920484735899663
RPSVRCLRPIL	11	Unmodified	_RPSVRCLRPIL_					0	0	0		ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2677307128906	3	437.267691	1308.78124	-0.49223	-0.00021524	0.94558	0.00041347	0.45335	0.00019824	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.75121	2	3950	3950;3995		21.78	0.63689	1	3262400			49968	10085	33558	33571	56392;56393	56392					0.13920484735899663
RPSVRCLRPIL	11	Unmodified	_RPSVRCLRPIL_					0	0	0		ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26800537109375	3	437.267691	1308.78124	-0.53562	-0.00023421	1.0154	0.000444	0.47978	0.00020979	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.72892	1	4172	4172		26.75	1.6237	1	4132000			49969	10085	33558	33571	56394	56394					0.13920484735899663
RPSVRCLRPIL	11	Unmodified	_RPSVRCLRPIL_					0	0	0		ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2676086425781	3	437.267691	1308.78124	-0.13248	-5.7929E-05	0.26663	0.00011659	0.13415	5.8658E-05	437.26771661657114	51.155	1.5796	51.59	50.873	52.452	0.43505					109	37	4	0	0	0	0.75457	1	5046	5046		21.032	2.5012	1	2614800			49970	10085	33558	33571	56395	56395					0.13920484735899663
RPSVRCLRPIL	11	Unmodified	_RPSVRCLRPIL_					0	0	0		ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	ENST00000327214.5_1_12:27091474-27091543:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2676086425781	3	437.267691	1308.78124	1.1666	0.00051013	-1.0571	-0.00046224	0.10952	4.7889E-05	437.26715109542596	51.001	1.6388	51.753	50.881	52.52	0.75174					116	39	4	0	0	0	0.74771	1	5014	5014		22.562	3.4581	1	3280800			49971	10085	33558	33571	56396	56396					0.13920484735899663
RPSYTGRKR	9	Unmodified	_RPSYTGRKR_					0	0	0			REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|119|2|sense	REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|119|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8199462890625	2	560.820338	1119.62612	-1.4169	-0.00079462	0.52008	0.00029167	-0.89681	-0.00050295	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.78536	1	9258	9258		29.15	0	1	758020	+		49972	29593	33559	33572	56397	56397					0.07109576925859074
RPTDATRWF	9	Unmodified	_RPTDATRWF_					0	0	0			REV__nc|ENSG00000073146|Q9BXT6-4|MOV10L1	REV__nc|ENSG00000073146|Q9BXT6-4|MOV10L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.2943725585938	2	575.293622	1148.57269	-0.38737	-0.00022285	-1.8737	-0.0010779	-2.2611	-0.0013008	575.2938552163392	76.272	2.3519	76.672	75.494	77.846	0.3997					143	62	4	0	0	0	0.67345	1	8574	8574		42.396	1.618	1	1387300	+		49973	16667	33560	33573	56398	56398					0.0043477942331264785
RPTEQAKAEM	10	Unmodified	_RPTEQAKAEM_					0	0	0		nc|ENSG00000114805|Q4KWH8-4|PLCH1	nc|ENSG00000114805|Q4KWH8-4|PLCH1	nc|ENSG00000114805|Q4KWH8-4|PLCH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.7901000976562	2	580.790055	1159.56556	-0.42667	-0.00024781	1.2119	0.00070384	0.78519	0.00045603	580.7906128619697	19.702	1.115	19.232	18.974	20.089	-0.46967					60	23	3	0	0	0	0.86587	1	548	548		29.17	3.596	1	396860			49974	14855	33561	33574	56399	56399					-0.00784321239439123
RPTHLLHPRR	10	Unmodified	_RPTHLLHPRR_					0	0	0			REV__ENSG00000102886|ENST00000406256|GDPD3	REV__ENSG00000102886|ENST00000406256|GDPD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8822021484375	2	641.883804	1281.75306	-0.046992	-3.0164E-05	-1.9848	-0.001274	-2.0318	-0.0013042	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.80179	1	9769	9769		39.253	10.083	1	2217900	+		49975	17367	33562	33575	56400	56400					0.1234492287080684
RPTHLLHPRR	10	Unmodified	_RPTHLLHPRR_					0	0	0			REV__ENSG00000102886|ENST00000406256|GDPD3	REV__ENSG00000102886|ENST00000406256|GDPD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8819580078125	2	641.883804	1281.75306	-0.050338	-3.2311E-05	-1.9563	-0.0012557	-2.0066	-0.001288	641.8823954757748	95.916	2.4458	95.982	94.508	96.954	0.06591					198	57	4	0	0	0	0.82886	2	10145	10027;10145		37.812	7.4938	1	1572400	+		49976	17367	33562	33575	56401;56402	56402					0.1234492287080684
RPTHLLHPRR	10	Unmodified	_RPTHLLHPRR_					0	0	0			REV__ENSG00000102886|ENST00000406256|GDPD3	REV__ENSG00000102886|ENST00000406256|GDPD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8826904296875	2	641.883804	1281.75306	1.5974	0.0010254	-3.7512	-0.0024078	-2.1538	-0.0013825	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.8651	1	9968	9968		25.574	3.6142	1	4266200	+		49977	17367	33562	33575	56403	56403					0.1234492287080684
RPTKAITHK	9	Unmodified	_RPTKAITHK_					0	0	0			REV__ENST00000556354.5_1_14:23983477-24028046:+|nuORF	REV__ENST00000556354.5_1_14:23983477-24028046:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3253173828125	2	526.322183	1050.62981	0.49555	0.00026082	4.4744	0.002355	4.97	0.0026158	526.3244353481127	63.57	1.605	63.693	63.334	64.939	0.12252					100	62	2	0	0	0	0.77244	1	5567	5567		32.812	2.3088	1	184350	+		49978	28697	33563	33576	56404	56404					0.10652246699669377
RPTKKFLERP	10	Unmodified	_RPTKKFLERP_					0	0	0			REV__ENSG00000158435|ENST00000289382|CNOT11	REV__ENSG00000158435|ENST00000289382|CNOT11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.3059387207031	3	424.59094	1270.75099	-0.10205	-4.3327E-05	-3.4171	-0.0014509	-3.5192	-0.0014942	424.5895507740556	38.404	0.52443	38.346	38.108	38.632	-0.057915					28	15	3	0	0	0	0.37624	1	2271	2271		27.047	10.33	1	75466	+		49979	20606	33564	33577	56405	56405					0.1264444934236053
RPTLKMQVVN	10	Unmodified	_RPTLKMQVVN_					0	0	0			REV__nc|ENSG00000069869|P46934-3|NEDD4	REV__nc|ENSG00000069869|P46934-3|NEDD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.34375	2	593.342258	1184.66996	0.88437	0.00052473	2.7538	0.0016339	3.6381	0.0021587	593.343785503265	103.21	2.4131	103.4	103.04	105.46	0.18297					159	60	4	0	0	0	0.86587	1	10903	10903		29.17	4.6509	1	4232500	+		49980	29707	33565	33578	56406	56406					0.0850142530798621
RPTLKMQVVN	10	Unmodified	_RPTLKMQVVN_					0	0	0			REV__nc|ENSG00000069869|P46934-3|NEDD4	REV__nc|ENSG00000069869|P46934-3|NEDD4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.3443603515625	2	593.342258	1184.66996	0.89398	0.00053044	2.8743	0.0017055	3.7683	0.0022359	593.3438403936742	103.36	2.3929	103.49	103.05	105.45	0.12621					170	59	5	0	0	0	0.8486	1	10981	10981		18.262	0.89712	1	4092800	+		49981	29707	33565	33578	56407	56407					0.0850142530798621
RPTLLAGLR	9	Unmodified	_RPTLLAGLR_					0	0	0		ENST00000371933.7_1_1:47184331-47184493:-|nuORF	ENST00000371933.7_1_1:47184331-47184493:-|nuORF	ENST00000371933.7_1_1:47184331-47184493:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.81884765625	2	498.819276	995.623999	0.17031	8.4956E-05	-0.41247	-0.00020575	-0.24216	-0.00012079	498.8189067868914	38.993	0.98392	38.963	38.538	39.522	-0.03027					63	22	4	0	0	0	0.64555	1	2722	2722		44.377	0.26039	1	875250			49982	10681	33566	33579	56408	56408					0.12601148188048228
RPTLLSSVH	9	Unmodified	_RPTLLSSVH_					0	0	0			REV__ENST00000359297.6_1_1:36806610-36807063:-|nuORF	REV__ENST00000359297.6_1_1:36806610-36807063:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.2923889160156	2	505.293091	1008.57163	-1.5977	-0.00080733	-1.6153	-0.00081618	-3.213	-0.0016235	505.2922038023598	97.2	2.3775	97.402	96.877	99.255	0.20206					132	54	3	0	0	0	0.7932	1	10056	10056		25.574	2.9944	1	991360	+		49983	25456	33567	33580	56409	56409					0.0676856505442629
RPTPERNTM	9	Unmodified	_RPTPERNTM_					0	0	0		ENST00000439326.7_1_19:12188026-12188518:+|nuORF	ENST00000439326.7_1_19:12188026-12188518:+|nuORF	ENST00000439326.7_1_19:12188026-12188518:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.2753295898438	2	551.277115	1100.53968	0.8757	0.00048275	-3.9886	-0.0021988	-3.1129	-0.0017161	551.2747934781779	27.265	1.266	27.237	26.749	28.015	-0.027706					88	32	4	0	0	0	0.64555	1	1246	1246		44.377	1.9027	1	621530			49984	11760	33568	33581	56410	56410					-0.006571706910335706
RPTRLPRRLS	10	Unmodified	_RPTRLPRRLS_					0	0	0		nc|ENSG00000183784|Q5T8R8|DOCK8-AS1	nc|ENSG00000183784|Q5T8R8|DOCK8-AS1	nc|ENSG00000183784|Q5T8R8|DOCK8-AS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.383544921875	2	626.391462	1250.76837	6.5467	0.0041008	1.8321	0.0011476	8.3787	0.0052484	626.3925083478181	111	0.24643	111.05	110.94	111.19	0.049088					9	7	2	0	0	0	0.37624	1	13481	13481		25.574	10.709	1	34474			49985	15145	33569	33582	56411	56411					0.15301789668023957
RPVATVRAS	9	Unmodified	_RPVATVRAS_					0	0	0			REV__ENST00000258180.7_1_16:85122602-85122683:+|nuORF	REV__ENST00000258180.7_1_16:85122602-85122683:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.7855529785156	2	478.785433	955.556313	-0.42495	-0.00020346	0.6385	0.0003057	0.21355	0.00010224	478.78545742505617	92.153	2.1454	92.198	91.261	93.406	0.045448					108	50	4	0	0	0	0.69624	1	9644	9644		40.778	10.275	1	799270	+		49986	24351	33570	33583	56412	56412					0.0767569825721921
RPVDRLRLGVQ	11	Unmodified	_RPVDRLRLGVQ_					0	0	0		ENST00000596390.1_1_19:7587593-7590231:+|nuORF	ENST00000596390.1_1_19:7587593-7590231:+|nuORF	ENST00000596390.1_1_19:7587593-7590231:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.936767578125	3	436.933477	1307.7786	0.49799	0.00021759	0.62254	0.00027201	1.1205	0.0004896	436.93369927878706	20.732	2.5953	20.273	19.595	22.19	-0.4591					152	59	4	0	0	0	0.78351	1	638	638		14.779	0.085136	1	492360			49987	14335	33571	33584	56413	56413					0.13702352602581414
RPVDSRLRVVQ	11	Unmodified	_RPVDSRLRVVQ_					0	0	0			REV__ENST00000519949.5_1_5:170395310-170725859:+|nuORF	REV__ENST00000519949.5_1_5:170395310-170725859:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.80865478515625	3	442.265115	1323.77352	0.20728	9.1673E-05	0.011652	5.1532E-06	0.21893	9.6826E-05	442.26523529954255	19.083	0.43354	18.61	18.492	18.925	-0.47266					11	9	2	0	0	0	0.17811	1	495	495		10.104	6.021	1	27762	+		49988	28093	33572	33585	56414	56414					0.1245804873999532
RPVEADSKI	9	Unmodified	_RPVEADSKI_					0	0	0		ENST00000311066.9_1_1:14113065-14113164:+|nuORF	ENST00000311066.9_1_1:14113065-14113164:+|nuORF	ENST00000311066.9_1_1:14113065-14113164:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.78277587890625	2	507.782556	1013.55056	0.88571	0.00044975	-1.5407	-0.00078236	-0.65502	-0.00033261	507.78156278549454	48.627	0.55497	49.532	49.25	49.805	0.90424					34	13	3	0	0	0	0.28163	1	4697	4697		66.429	6.311	1	1346600			49989	9918	33573	33586	56415	56415					0.04432554954905754
RPVFLDKW	8	Unmodified	_RPVFLDKW_					0	0	0			REV__ENSG00000089737|ENST00000621632|DDX24	REV__ENSG00000089737|ENST00000621632|DDX24	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.801025390625	2	530.800552	1059.58655	1.1393	0.00060472	1.3944	0.00074017	2.5337	0.0013449	530.8010889250351	19.104	0.76083	18.634	18.495	19.256	-0.46967					33	16	3	0	0	0	0.87922	1	470	470		31.955	6.3808	1	252180	+		49990	16975	33574	33587	56416	56416					0.05914056922438249
RPVGSIPLWLQ	11	Unmodified	_RPVGSIPLWLQ_					0	0	0		nc|ENSG00000188992|Q6XZB0-7|LIPI;nc|ENSG00000188992|Q6XZB0-6|LIPI;nc|ENSG00000188992|Q6XZB0-4|LIPI;nc|ENSG00000188992|Q6XZB0-5|LIPI;nc|ENSG00000188992|Q6XZB0-3|LIPI;ENSG00000188992|ENST00000681601|LIPI;nc|ENSG00000188992|Q6XZB0-2|LIPI	nc|ENSG00000188992|Q6XZB0-7|LIPI	nc|ENSG00000188992|Q6XZB0-7|LIPI	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.369873046875	2	633.371872	1264.72919	-0.11908	-7.5423E-05	-4.0759	-0.0025816	-4.195	-0.002657	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.6921	1	9602	9602		32.812	0.061884	1	2722900			49991	7978	33575	33588	56417	56417					0.10741644593804267
RPVGTLYLL	9	Unmodified	_RPVGTLYLL_					0	0	0		nc|ENSG00000169851|O60245|PCDH7;nc|ENSG00000169851|O60245-2|PCDH7;ENSG00000169851|ENST00000695919|PCDH7	nc|ENSG00000169851|O60245|PCDH7	nc|ENSG00000169851|O60245|PCDH7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3143920898438	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.7724	-0.0014314	-4.3342	-0.0022378	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.7932	1	10181	10181		24.203	4.206	1	66055000			49992	6528	33576	33589	56418	56418					0.10343210236646883
RPVGVHSGL	9	Unmodified	_RPVGVHSGL_					0	0	0			REV__ENST00000582100.1_2_17:80062897-80064212:-|nuORF	REV__ENST00000582100.1_2_17:80062897-80064212:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.2652282714844	2	461.266876	920.519199	-1.7411	-0.00080311	-2.0276	-0.00093525	-3.7687	-0.0017384	461.2657948964192	92.93	1.4274	93.123	92.648	94.076	0.19239					83	33	3	0	0	0	0.7932	1	9385	9385		19.997	0.6368	1	842390	+		49993	29055	33577	33590	56419	56419					0.0557602671146924
RPVILIGYGT	10	Unmodified	_RPVILIGYGT_					0	0	0		nc|ENSG00000141449|Q9C091-4|GREB1L;ENST00000578368.5_1_18:18963479-19048745:+|nuORF;ENST00000584446.5_1_18:18963479-19034595:+|nuORF;ENSG00000141449|ENST00000424526|GREB1L;nc|ENSG00000141449|Q9C091-3|GREB1L	nc|ENSG00000141449|Q9C091-4|GREB1L	nc|ENSG00000141449|Q9C091-4|GREB1L	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.8250122070312	2	544.826766	1087.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.626	1	98.676	98.176	99.176	0.04982								0	0	0	0.45132	1	10435	10435		27.882	2.3082	1				49994	4502	33578	33591	56420	56420					0.09866595265384603
RPVIRGGT	8	Unmodified	_RPVIRGGT_					0	0	0			REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2613830566406	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.87064	1	9460	9460		29.15	0.89528	1	52688000	+		49995	26512	33579	33592	56421	56421					0.07556044057048439
RPVIRGGT	8	Unmodified	_RPVIRGGT_					0	0	0			REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2615051269531	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.8347	2	9557	9557;9570		23.042	4.7181	1	55300000	+		49996	26512	33579	33592	56422;56423	56422					0.07556044057048439
RPVIRGGT	8	Unmodified	_RPVIRGGT_					0	0	0			REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2616271972656	2	428.261594	854.508634	-1.6655	-0.00071328	1.873	0.00080211	0.20742	8.8832E-05	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.87064	3	9185	9185;9197;9209		29.15	1.2673	1	44776000	+		49997	26512	33579	33592	56424;56425;56426	56424					0.07556044057048439
RPVIRGGT	8	Unmodified	_RPVIRGGT_					0	0	0			REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.2616882324219	2	428.261594	854.508634	0.64465	0.00027608	-0.51085	-0.00021878	0.1338	5.7301E-05	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.89962	1	9223	9223		38.806	8.3025	1	40631000	+		49998	26512	33579	33592	56427	56427					0.07556044057048439
RPVIRGGT	8	Unmodified	_RPVIRGGT_					0	0	0			REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.2614440917969	2	428.261594	854.508634	1.2297	0.00052665	-1.0776	-0.00046151	0.1521	6.5138E-05	428.26104076888095	90.552	2.3243	91.003	90.412	92.737	0.45058					198	55	5	0	0	0	0.89962	2	10709	10709;10793		45.952	7.1458	1	32404000	+		49999	26512	33579	33592	56428;56429	56428					0.07556044057048439
RPVIRGGT	8	Unmodified	_RPVIRGGT_					0	0	0			REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.26123046875	2	428.261594	854.508634	-1.021	-0.00043726	1.2368	0.00052966	0.21577	9.2404E-05	428.26203928148993	90.556	2.3584	91.026	90.524	92.882	0.47068					198	56	5	0	0	0	0.85277	2	10715	10715;10761		29.15	3.6994	1	38446000	+		50000	26512	33579	33592	56430;56431	56430					0.07556044057048439
RPVITGGR	8	Unmodified	_RPVITGGR_					0	0	0			REV__ENSG00000089597|ENST00000356638|GANAB	REV__ENSG00000089597|ENST00000356638|GANAB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	427.30267333984375	2	428.261594	854.508634	-1.2422	-0.00053198	-1.5184	-0.00065027	-2.7606	-0.0011822	428.26234419573865	70.887	0.10063	70.963	70.875	70.975	0.076225					6	4	2	0	0	0	0.4196	1	6418	6418		51.335	0	1	35920	+		50001	16971	33580	33593	56432	56432					0.07556044057048439
RPVKELDYE	9	Unmodified	_RPVKELDYE_					0	0	0			REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.2939453125	2	574.800946	1147.58734	0.5894	0.00033879	-0.056885	-3.2697E-05	0.53252	0.00030609	574.8008435132051	69.049	0.45257	69.177	68.924	69.377	0.12838					30	18	2	0	0	0	0.69914	1	6254	6254		40.573	1.3198	1	150300	+		50002	28458	33581	33594	56433	56433					0.019448067808070846
RPVKELDYE	9	Unmodified	_RPVKELDYE_					0	0	0			REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	574.800946	1147.58734	-0.81614	-0.00046912	1.6057	0.00092295	0.78954	0.00045383	574.8013983350938	69.394	0.4043	69.394	69.163	69.567	0	0.17374	0.00088278	NaN	40.573	27	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76517	+		50003	28458	33581	33594							0.019448067808070846
RPVKELDYE	9	Unmodified	_RPVKELDYE_					0	0	0			REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	574.800946	1147.58734	-0.50476	-0.00029014	1.2643	0.00072673	0.75956	0.0004366	575.3031494758635	69.212	0.38838	69.175	68.968	69.357	-0.036957	-0.045131	0.00049036	NaN	40.573	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83290	+		50004	28458	33581	33594							0.019448067808070846
RPVKELDYE	9	Unmodified	_RPVKELDYE_					0	0	0			REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	574.800946	1147.58734	-0.23414	-0.00013458	0.99471	0.00057176	0.76057	0.00043718	574.8012622738346	69.072	0.40482	69.105	68.974	69.379	0.032997	-0.11504	0.00018041	NaN	40.573	26	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58041	+		50005	28458	33581	33594							0.019448067808070846
RPVKELDYE	9	Unmodified	_RPVKELDYE_					0	0	0			REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	574.800946	1147.58734	0.55027	0.00031629	-0.065802	-3.7823E-05	0.48446	0.00027847	574.8009071844789	69.069	0.48599	69.204	68.91	69.396	0.13522	-0.015811	-0.0010388	NaN	40.573	34	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114020	+		50006	28458	33581	33594							0.019448067808070846
RPVKELDYE	9	Unmodified	_RPVKELDYE_					0	0	0			REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	REV__ENST00000540215.1_1_13:111296932-111298616:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	574.800946	1147.58734	-0.70516	-0.00040533	1.7606	0.001012	1.0554	0.00060666	574.801743763067	69.2	0.46542	69.266	69.016	69.481	0.065506	0.045481	0.0010609	NaN	40.573	33	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147340	+		50007	28458	33581	33594							0.019448067808070846
RPVKEPKVQDS	11	Unmodified	_RPVKEPKVQDS_					0	0	0			REV__nc|ENSG00000181191|Q8NG27-2|PJA1	REV__nc|ENSG00000181191|Q8NG27-2|PJA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8588256835938	2	641.859326	1281.7041	-0.048721	-3.1272E-05	0.17206	0.00011044	0.12334	7.9165E-05	642.3606818135578	117.84	0.45222	117.77	117.68	118.13	-0.07531					35	17	4	0	0	0	0.60058	1	12644	12644		44.377	11.565	1	345880	+		50008	22443	33582	33595	56434	56434					0.07451545000549231
RPVKKALKQLD	11	Unmodified	_RPVKKALKQLD_					0	0	0		nc|ENSG00000173575|O14647-2|CHD2;ENSG00000173575|ENST00000394196|CHD2	nc|ENSG00000173575|O14647-2|CHD2	nc|ENSG00000173575|O14647-2|CHD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5977783203125	3	432.610111	1294.8085	-1.8324	-0.00079274	-1.4204	-0.00061449	-3.2529	-0.0014072	432.60965836402926	106.13	0.27969	106.19	105.98	106.26	0.053757					9	6	2	0	0	0	0.17289	1	11264	11264		27.644	17.54	1	106090			50009	6870	33583	33596	56435	56435					0.17289291547922403
RPVKKNGT	8	Unmodified	_RPVKKNGT_					0	0	0		ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2746887207031	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.8347	1	9378	9378		23.042	1.3402	1	26247000			50010	11747	33584	33597	56436	56436					0.08152313228526964
RPVKKNGT	8	Unmodified	_RPVKKNGT_					0	0	0		ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2743225097656	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.85277	1	10021	10021		25.45	1.2474	1	47650000			50011	11747	33584	33597	56437	56437					0.08152313228526964
RPVKKNGT	8	Unmodified	_RPVKKNGT_					0	0	0		ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27447509765625	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.84341	2	10001	10001;10013		24.203	1.1603	1	51820000			50012	11747	33584	33597	56438;56439	56438					0.08152313228526964
RPVKKNGT	8	Unmodified	_RPVKKNGT_					0	0	0		ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2740783691406	2	450.274701	898.534849	-1.2506	-0.00056311	0.52833	0.00023789	-0.72226	-0.00032522	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.8347	1	9654	9654		23.042	1.0826	1	44812000			50013	11747	33584	33597	56440	56440					0.08152313228526964
RPVKKNGT	8	Unmodified	_RPVKKNGT_					0	0	0		ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2742919921875	2	450.274701	898.534849	-1.247	-0.00056151	1.4065	0.00063329	0.15942	7.1784E-05	450.2752637415859	95.005	1.8382	95.236	94.9	96.739	0.23103					104	43	3	0	0	0	0.84341	1	9787	9787		24.203	1.1603	1	829000			50014	11747	33584	33597	56441	56441					0.08152313228526964
RPVKKNGT	8	Unmodified	_RPVKKNGT_					0	0	0		ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.274169921875	2	450.274701	898.534849	0.70497	0.00031743	-0.5445	-0.00024518	0.16047	7.2255E-05	450.274392035395	95.119	1.9705	95.282	94.908	96.878	0.16307					118	46	3	0	0	0	0.86677	1	9767	9767		27.882	3.6795	1	967700			50015	11747	33584	33597	56442	56442					0.08152313228526964
RPVKKNGT	8	Unmodified	_RPVKKNGT_					0	0	0		ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2743225097656	2	450.274701	898.534849	-1.7763	-0.00079984	1.0964	0.00049366	-0.67999	-0.00030618	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.85277	1	9324	9324		25.45	2.4077	1	35178000			50016	11747	33584	33597	56443	56443					0.08152313228526964
RPVKKNGT	8	Unmodified	_RPVKKNGT_					0	0	0		ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	ENST00000437944.5_1_2:175260481-175263028:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.273681640625	2	450.274701	898.534849	-1.7763	-0.00079983	1.9054	0.00085797	0.12912	5.8138E-05	450.2754829150514	95.155	2.0569	95.357	94.777	96.834	0.20242					114	48	3	0	0	0	0.84341	1	9761	9761		24.203	2.2429	1	856850			50017	11747	33584	33597	56444	56444					0.08152313228526964
RPVKLVGG	8	Unmodified	_RPVKLVGG_					0	0	0			REV__chr19:18437715-18437860|19|100.95|0.45|7.81|-|0|None,ISYNA1|1	REV__chr19:18437715-18437860|19|100.95|0.45|7.81|-|0|None,ISYNA1|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.237548828125	2	413.268887	824.523222	-1.8392	-0.00076009	-3.3121	-0.0013688	-5.1514	-0.0021289	413.267258536333	74.269	0.75527	74.396	73.87	74.625	0.12711					48	30	2	0	0	0	0.4196	1	6855	6855		20.482	2.1574	1	200510	+		50018	15688	33585	33598	56445	56445					0.10394116205202408
RPVKLVGG	8	Unmodified	_RPVKLVGG_					0	0	0			REV__chr19:18437715-18437860|19|100.95|0.45|7.81|-|0|None,ISYNA1|1	REV__chr19:18437715-18437860|19|100.95|0.45|7.81|-|0|None,ISYNA1|1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	413.268887	824.523222	0.18547	7.6648E-05	-1.5031	-0.00062119	-1.3176	-0.00054454	413.2681145711675	73.982	1.0596	74.37	74.011	75.07	0.38779	-0.0047961	0.0004233	NaN	20.482	47	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	669980	+		50019	15688	33585	33598							0.10394116205202408
RPVKLVGG	8	Unmodified	_RPVKLVGG_					0	0	0			REV__chr19:18437715-18437860|19|100.95|0.45|7.81|-|0|None,ISYNA1|1	REV__chr19:18437715-18437860|19|100.95|0.45|7.81|-|0|None,ISYNA1|1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	413.268887	824.523222	-0.0022757	-9.4047E-07	-1.5353	-0.0006345	-1.5376	-0.00063544	413.2681012894407	73.799	1.0183	74.358	73.984	75.002	0.55891	-0.016759	0.00039668	NaN	20.482	47	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	593460	+		50020	15688	33585	33598							0.10394116205202408
RPVKVGSGTT	10	Unmodified	_RPVKVGSGTT_					0	0	0			REV__ENST00000470565.5_1_20:48713044-48729665:-|nuORF	REV__ENST00000470565.5_1_20:48713044-48729665:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29022216796875	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.8651	1	8551	8551		25.574	1.07	1	2850500	+		50021	23853	33586	33599	56446	56446					0.06628261191815454
RPVLEELEL	9	Unmodified	_RPVLEELEL_					0	0	0			REV__ENSG00000204969|ENST00000526136|PCDHA2	REV__ENSG00000204969|ENST00000526136|PCDHA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.31787109375	2	549.313689	1096.61282	3.3171	0.0018221	3.9476	0.0021684	7.2647	0.0039906	549.3157779565678	101.02	2.3329	100.97	100.53	102.87	-0.052109					129	55	4	0	0	0	0.76764	1	10972	10972		34.173	8.5985	1	1991000	+		50022	23533	33587	33600	56447	56447					0.06838281303225813
RPVLGVKG	8	Unmodified	_RPVLGVKG_					0	0	0		ENSG00000110925|ENST00000228515|CSRNP2	ENSG00000110925|ENST00000228515|CSRNP2	ENSG00000110925|ENST00000228515|CSRNP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2682189941406	2	413.268887	824.523222	0.027364	1.1309E-05	-0.90754	-0.00037506	-0.88018	-0.00036375	413.2683530994615	72.986	0.56035	73.54	73.232	73.792	0.55386					31	13	3	0	0	0	0.86288	1	8194	8194		26.796	1.3459	1	730520			50023	2553	33588	33601	56448	56448					0.1039411620519104
RPVLPPPAP	9	Unmodified	_RPVLPPPAP_					0	0	0		ENSG00000176182|ENST00000322217|MYPOP	ENSG00000176182|ENST00000322217|MYPOP	ENSG00000176182|ENST00000322217|MYPOP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2878112792969	2	472.28982	942.565087	-0.91682	-0.000433	-3.6711	-0.0017338	-4.588	-0.0021668	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.7932	1	10062	10062		25.45	0	1	50946000			50024	7061	33589	33602	56449	56449					0.09150671893689832
RPVLQSPVGG	10	Unmodified	_RPVLQSPVGG_					0	0	0			REV__ENST00000597244.1_1_19:16688850-16689066:-|nuORF	REV__ENST00000597244.1_1_19:16688850-16689066:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	505.2924499511719	2	505.293091	1008.57163	-0.768	-0.00038806	-2.1626	-0.0010927	-2.9306	-0.0014808	505.2918931057953	97.609	1.9763	97.609	97.162	99.138	0					93	47	3	0	0	0	0.86348	2	9776	9776;9786		31.53	9.3708	1	573460	+		50025	29263	33590	33603	56450;56451	56450					0.0676856505442629
RPVLQSPVGG	10	Unmodified	_RPVLQSPVGG_					0	0	0			REV__ENST00000597244.1_1_19:16688850-16689066:-|nuORF	REV__ENST00000597244.1_1_19:16688850-16689066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	505.29156494140625	2	505.293091	1008.57163	-0.058143	-2.9379E-05	-3.071	-0.0015518	-3.1291	-0.0015811	505.291445253125	97.476	2.5316	97.533	97.032	99.564	0.056831					136	58	3	0	0	0	0.70553	2	10295	10249;10295		44.377	17.581	1	1323100	+		50026	29263	33590	33603	56452;56453	56453					0.0676856505442629
RPVLQSPVGG	10	Unmodified	_RPVLQSPVGG_					0	0	0			REV__ENST00000597244.1_1_19:16688850-16689066:-|nuORF	REV__ENST00000597244.1_1_19:16688850-16689066:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.2915954589844	2	505.293091	1008.57163	0.1005	5.078E-05	-3.3009	-0.0016679	-3.2004	-0.0016171	505.29135010740674	97.203	2.3609	97.251	96.739	99.1	0.048157					135	54	4	0	0	0	0.82886	2	10334	10334;10356		37.812	13.292	1	1336200	+		50027	29263	33590	33603	56454;56455	56454					0.0676856505442629
RPVLRGGG	8	Unmodified	_RPVLRGGG_					0	0	0		ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24847412109375	2	406.248486	810.48242	-1.171	-0.0004757	1.5737	0.0006393	0.40272	0.0001636	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.88915	1	8496	8496		35.201	1.6851	1	30016000			50028	12331	33591	33604	56456	56456					0.06959774885569914
RPVLRGGG	8	Unmodified	_RPVLRGGG_					0	0	0		ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24859619140625	2	406.248486	810.48242	2.7178	0.0011041	-2.1477	-0.00087251	0.57008	0.0002316	406.24748869064086	111.72	0.8214	111.69	111.25	112.07	-0.025414					71	31	3	0	0	0	0.80706	1	12362	12362		19.36	5.5846	1	80466			50029	12331	33591	33604	56457	56457					0.06959774885569914
RPVLRGGG	8	Unmodified	_RPVLRGGG_					0	0	0		ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.248291015625	2	406.248486	810.48242	0.62319	0.00025317	-0.33604	-0.00013652	0.28715	0.00011666	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.85277	1	8931	8931		25.45	4.9683	1	38001000			50030	12331	33591	33604	56458	56458					0.06959774885569914
RPVLRGGG	8	Unmodified	_RPVLRGGG_					0	0	0		ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2478942871094	2	406.248486	810.48242	3.1451	0.0012777	-2.8339	-0.0011513	0.31112	0.00012639	406.2472569987741	110.94	0.91206	110.99	110.73	111.64	0.054062					48	31	2	0	0	0	0.85787	1	13415	13415		9.4706	0	1	457940			50031	12331	33591	33604	56459	56459					0.06959774885569914
RPVLRGGG	8	Unmodified	_RPVLRGGG_					0	0	0		ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2483825683594	2	406.248486	810.48242	3.1442	0.0012773	-3.4094	-0.0013851	-0.26526	-0.00010776	406.24697611805044	112.74	0.52679	112.77	112.38	112.91	0.030602					35	22	2	0	0	0	0.81724	1	13638	13638		14.664	0.88877	1	70745			50032	12331	33591	33604	56460	56460					0.06959774885569914
RPVLRGGG	8	Unmodified	_RPVLRGGG_					0	0	0		ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2483215332031	2	406.248486	810.48242	-1.235	-0.0005017	1.527	0.00062034	0.29202	0.00011863	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.81548	3	10552	10504;10528;10552		26.796	3.7536	1	38125000			50033	12331	33591	33604	56461;56462;56463	56463					0.06959774885569914
RPVLSQSGKLH	11	Unmodified	_RPVLSQSGKLH_					0	0	0		ENST00000313871.8_1_X:1720532-1720865:+|nuORF	ENST00000313871.8_1_X:1720532-1720865:+|nuORF	ENST00000313871.8_1_X:1720532-1720865:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.354248046875	2	611.356754	1220.69895	0.8676	0.00053041	-1.2868	-0.00078671	-0.41922	-0.00025629	611.3560720152175	95.924	5.0581	96.087	95.071	100.13	0.16317					363	118	6	0	0	0	0.67778	1	9729	9729		35.152	2.3396	1	16539000			50034	9957	33592	33605	56464	56464					0.09743285928607293
RPVLTLRAPGT	11	Unmodified	_RPVLTLRAPGT_					0	0	0		ENSG00000143297|ENST00000361835|FCRL5;ENST00000461387.5_1_1:157490334-157491110:-|nuORF	ENSG00000143297|ENST00000361835|FCRL5	ENSG00000143297|ENST00000361835|FCRL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8668823242188	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.67778	1	11494	11494		35.152	4.8343	1	52150000			50035	4614	33593	33606	56465	56465					0.12612473933972979
RPVLVTLSQQI	11	Unmodified	_RPVLVTLSQQI_					0	0	0			REV__ENSG00000095564|ENST00000265990|BTAF1	REV__ENSG00000095564|ENST00000265990|BTAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3834228515625	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.7342	1	12903	12903		25.574	1.0549	1	19815000	+		50036	17061	33594	33607	56466	56466					0.13405609902679316
RPVPAFVPPAL	11	Unmodified	_RPVPAFVPPAL_					0	0	0		ENST00000289166.5_1_1:27339207-27339312:-|nuORF	ENST00000289166.5_1_1:27339207-27339312:-|nuORF	ENST00000289166.5_1_1:27339207-27339312:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3526000976562	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.68	1	117.66	117.16	118.16	-0.02433								0	0	0	0.56276	1	13031	13031		21.96	1.9631	1				50037	9668	33595	33608	56467	56467					0.11142874536380987
RPVPKGATY	9	Unmodified	_RPVPKGATY_					0	0	0		nc|ENSG00000174748|P61313-2|RPL15;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENSG00000174748|ENST00000307839|RPL15	nc|ENSG00000174748|P61313-2|RPL15	nc|ENSG00000174748|P61313-2|RPL15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7823486328125	2	494.782359	987.550165	-0.044858	-2.2195E-05	-0.23694	-0.00011723	-0.28179	-0.00013943	494.78221273362203	25.066	1.2723	24.738	24.295	25.567	-0.32825					87	28	6	0	0	0	9.502000000000001E-29	6	1270	1235;1246;1258;1270;1282;1298		185.55	105.61	1	2510700			50038	6961	33596	33609	56468;56469;56470;56471;56472;56473	56471					0.0558918002569726
RPVPKGATY	9	Unmodified	_RPVPKGATY_					0	0	0		nc|ENSG00000174748|P61313-2|RPL15;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENSG00000174748|ENST00000307839|RPL15	nc|ENSG00000174748|P61313-2|RPL15	nc|ENSG00000174748|P61313-2|RPL15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.78216552734375	2	494.782359	987.550165	2.0595	0.001019	-2.4388	-0.0012067	-0.37935	-0.0001877	494.78110332701044	25.036	1.6025	24.524	24.013	25.616	-0.5123					97	36	6	0	0	0	5.727E-39	6	1284	1241;1249;1260;1272;1284;1296		195.81	121.84	1	3117700			50039	6961	33596	33609	56474;56475;56476;56477;56478;56479	56478					0.0558918002569726
RPVPLEQTY	9	Unmodified	_RPVPLEQTY_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.797607421875	2	551.798206	1101.58186	-1.4727	-0.00081266	-1.1734	-0.00064748	-2.6461	-0.0014601	551.7974234936669	43.334	0.72378	43.768	43.419	44.143	0.4334					40	17	3	0	0	0	0.07589	3	3905	3905;3915;3927		98.629	41.908	1	2402200			50040	4683	33597	33610	56480;56481;56482	56480					0.03513127989003806
RPVPLEQTY	9	Unmodified	_RPVPLEQTY_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.7954711914062	2	551.798206	1101.58186	-1.9533	-0.0010778	-0.10201	-5.629E-05	-2.0553	-0.0011341	551.7979421716578	43.152	0.76295	43.926	43.54	44.303	0.7738					42	18	3	0	0	0	0.017216	3	3890	3890;3903;3916		127.46	61.032	1	2422000			50041	4683	33597	33610	56483;56484;56485	56483					0.03513127989003806
RPVPLPRPG	9	Unmodified	_RPVPLPRPG_					0	0	0		ENSG00000203786|ENST00000606109|KPRP	ENSG00000203786|ENST00000606109|KPRP	ENSG00000203786|ENST00000606109|KPRP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.8050231933594	2	494.806168	987.597784	-0.45163	-0.00022347	-1.0768	-0.00053283	-1.5285	-0.0007563	494.8055403837129	78.739	1.1015	79.15	78.592	79.694	0.4106					45	25	2	0	0	0	0.28875	1	8994	8994		65.803	11.039	1	669360			50042	8394	33598	33611	56486	56486					0.10348879016555657
RPVPLPRPG	9	Unmodified	_RPVPLPRPG_					0	0	0		ENSG00000203786|ENST00000606109|KPRP	ENSG00000203786|ENST00000606109|KPRP	ENSG00000203786|ENST00000606109|KPRP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	494.806168	987.597784	-0.26675	-0.00013199	-0.98943	-0.00048957	-1.2562	-0.00062157	494.8054953969732	78.56	0.88347	79.123	78.618	79.502	0.56332	-0.013373	4.8006E-05	NaN	65.803	46	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	688180			50043	8394	33598	33611							0.10348879016555657
RPVPLRTTVQT	11	Unmodified	_RPVPLRTTVQT_					0	0	0			REV__nc|ENSG00000171681|Q6VMQ6-2|ATF7IP	REV__nc|ENSG00000171681|Q6VMQ6-2|ATF7IP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3754272460938	2	634.377686	1266.74082	0.93365	0.00059228	-1.959	-0.0012427	-1.0253	-0.00065045	634.3762780737788	111.26	0.49553	111.33	110.97	111.47	0.069542					38	19	2	0	0	0	0.7434	1	11984	11984		23.523	4.4192	1	1383700	+		50044	21758	33599	33612	56487	56487					0.11811841617122809
RPVPLRTTVQT	11	Unmodified	_RPVPLRTTVQT_					0	0	0			REV__nc|ENSG00000171681|Q6VMQ6-2|ATF7IP	REV__nc|ENSG00000171681|Q6VMQ6-2|ATF7IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3764038085938	2	634.377686	1266.74082	2.2036	0.0013979	-3.0142	-0.0019121	-0.81065	-0.00051426	634.3750780706696	111.6	0.45724	111.65	111.39	111.85	0.041832					52	15	4	0	0	0	0.67778	1	13516	13516		35.152	0	1	7905500	+		50045	21758	33599	33612	56488	56488					0.11811841617122809
RPVPNDKAI	9	Unmodified	_RPVPNDKAI_					0	0	0			REV__nc|ENSG00000196511|Q9H3S4-2|TPK1	REV__nc|ENSG00000196511|Q9H3S4-2|TPK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.2914733886719	2	505.293091	1008.57163	0.1005	5.078E-05	-3.3009	-0.0016679	-3.2004	-0.0016171	505.29135010740674	97.203	2.3609	97.251	96.739	99.1	0.048157					135	54	4	0	0	0	0.76764	1	10345	10345		34.173	8.5985	1	1336200	+		50046	27478	33600	33613	56489	56489					0.06768565054414921
RPVQDYLSLSS	11	Unmodified	_RPVQDYLSLSS_					0	0	0		ENSG00000157379|ENST00000288111|DHRS1;ENST00000561281.4_1_14:24760067-24760528:-|nuORF;ENST00000558340.1_1_14:24760067-24761569:-|nuORF;ENST00000559084.1_1_14:24760067-24760244:-|nuORF	ENSG00000157379|ENST00000288111|DHRS1;ENST00000559084.1_1_14:24760067-24760244:-|nuORF	ENSG00000157379|ENST00000288111|DHRS1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.869873046875	2	632.830234	1263.64592	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.142	1	80.142	79.642	80.642	0								0	0	0	0.56276	1	7389	7389		33.922	1.1092	1				50047	5425;13804	33601	33614	56490	56490					0.024638633552967804
RPVRAIKS	8	Unmodified	_RPVRAIKS_					0	0	0			REV__ENST00000472892.1_1_10:114207101-114208650:+|nuORF	REV__ENST00000472892.1_1_10:114207101-114208650:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.80035400390625	2	463.798343	925.582134	0.28206	0.00013082	4.2188	0.0019567	4.5009	0.0020875	463.8001612881591	41.523	1.5134	41.492	41.236	42.75	-0.030991					87	37	3	0	0	0	0.84341	1	3067	3067		24.203	4.8428	1	527400	+		50048	20256	33602	33615	56491	56491					0.1163659249950797
RPVRGGLG	8	Unmodified	_RPVRGGLG_					0	0	0		nc|ENSG00000144749|Q96JA1-2|LRIG1;ENSG00000144749|ENST00000273261|LRIG1	nc|ENSG00000144749|Q96JA1-2|LRIG1	nc|ENSG00000144749|Q96JA1-2|LRIG1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24859619140625	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.56	1	118.54	118.04	119.04	-0.024208								0	0	0	0.29452	1	13134	13134		33.516	1.5607	1				50049	4730	33603	33616	56492	56492					0.06959774885581282
RPVRRGARRG	10	Unmodified	_RPVRRGARRG_					0	0	0		ENST00000334176.3_1_19:33166647-33167097:+|nuORF	ENST00000334176.3_1_19:33166647-33167097:+|nuORF	ENST00000334176.3_1_19:33166647-33167097:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8671264648438	2	590.865946	1179.71734	0.84845	0.00050132	-0.15772	-9.3192E-05	0.69073	0.00040813	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.8608	1	11168	11168		34.173	0	1	94771000			50050	10144	33604	33617	56493	56493					0.13466885413822638
RPVRRGARRG	10	Unmodified	_RPVRRGARRG_					0	0	0		ENST00000334176.3_1_19:33166647-33167097:+|nuORF	ENST00000334176.3_1_19:33166647-33167097:+|nuORF	ENST00000334176.3_1_19:33166647-33167097:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8668823242188	2	590.865946	1179.71734	-1.319	-0.00077937	2.1106	0.0012471	0.79159	0.00046772	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.86763	1	11135	11135		26.693	0	1	81379000			50051	10144	33604	33617	56494	56494					0.13466885413822638
RPVRRKYKNG	10	Unmodified	_RPVRRKYKNG_					0	0	0			REV__ENSG00000157933|ENST00000378536|SKI	REV__ENSG00000157933|ENST00000378536|SKI	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	637.38623046875	2	637.383637	1272.75272	-0.10456	-6.6643E-05	3.0953	0.0019729	2.9907	0.0019063	637.3855814141393	112.54	0.37978	112.48	112.37	112.75	-0.063889					21	12	2	0	0	0	0.85958	1	12226	12226		15.642	4.7763	1	627860	+		50052	20574	33605	33618	56495	56495					0.12725503150977602
RPVRTCSKVL	10	Unmodified	_RPVRTCSKVL_					0	0	0		ENST00000468472.1_1_3:52853923-52864679:-|nuORF;nc|ENSG00000055955|Q14624-4|ITIH4;nc|ENSG00000055955|Q14624-3|ITIH4;nc|ENSG00000055955|Q14624-2|ITIH4;ENSG00000055955|ENST00000266041|ITIH4	ENST00000468472.1_1_3:52853923-52864679:-|nuORF	ENST00000468472.1_1_3:52853923-52864679:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.8438110351562	2	579.842425	1157.6703	0.46014	0.00026681	2.3686	0.0013734	2.8287	0.0016402	579.8436677237017	102.22	1.1397	102.27	101.85	102.99	0.043198					70	27	3	0	0	0	0.86272	1	11094	11094		24.519	4.5224	1	1168900			50053	1032	33606	33619	56496	56496					0.09776845027818126
RPVSGRGP	8	Unmodified	_RPVSGRGP_					0	0	0			REV__ENST00000517634.1_2_5:156692399-156693603:-|nuORF	REV__ENST00000517634.1_2_5:156692399-156693603:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2374572753906	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.89043	1	6867	6867		35.618	0	1	1341700	+		50054	28048	33607	33620	56497	56497					0.04243184505912723
RPVSLRGG	8	Unmodified	_RPVSLRGG_					0	0	0		ENST00000382745.8_1_16:1524866-1525220:-|nuORF	ENST00000382745.8_1_16:1524866-1525220:-|nuORF	ENST00000382745.8_1_16:1524866-1525220:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.2540283203125	2	421.253769	840.492984	0.67687	0.00028514	-0.16156	-6.8057E-05	0.51531	0.00021708	421.25351698068755	84.328	1.4775	84.259	83.718	85.196	-0.069313					81	33	3	0	0	0	0.80706	2	8616	8616;8641		24.203	0	1	949480			50055	10977	33608	33621	56498;56499	56498					0.06635757539993392
RPVSPAPGRR	10	Unmodified	_RPVSPAPGRR_					0	0	0		nc|ENSG00000135439|Q99490|AGAP2;ENSG00000135439|ENST00000547588|AGAP2	nc|ENSG00000135439|Q99490|AGAP2	nc|ENSG00000135439|Q99490|AGAP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.840087890625	2	546.822881	1091.63121	0.194	0.00010608	-1.6928	-0.00092567	-1.4988	-0.00081958	546.8221406703368	100.81	0.64972	101.02	100.63	101.28	0.2058					22	15	2	0	0	0	0.37624	1	10549	10549		47.657	8.4045	1	684150			50056	4019	33609	33622	56500	56500					0.08905880788461218
RPVSPAPGRR	10	Unmodified	_RPVSPAPGRR_					0	0	0		nc|ENSG00000135439|Q99490|AGAP2;ENSG00000135439|ENST00000547588|AGAP2	nc|ENSG00000135439|Q99490|AGAP2	nc|ENSG00000135439|Q99490|AGAP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8397216796875	2	546.822881	1091.63121	-1.4625	-0.00079972	-2.5509	-0.0013949	-4.0134	-0.0021946	546.8201394300411	100.85	0.24211	101.01	100.85	101.09	0.16295					9	5	3	0	0	0	0.37624	1	10489	10489		62.107	21.329	1	343820			50057	4019	33609	33622	56501	56501					0.08905880788461218
RPVSRRLH	8	Unmodified	_RPVSRRLH_					0	0	0		ENST00000417456.1_1_1:35441975-35442986:-|nuORF	ENST00000417456.1_1_1:35441975-35442986:-|nuORF	ENST00000417456.1_1_1:35441975-35442986:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8132629394531	2	510.812316	1019.61008	0.55381	0.0002829	0.37529	0.0001917	0.9291	0.0004746	510.8124157533129	80.736	1.2851	81.262	80.695	81.98	0.52676					56	30	3	0	0	0	0.89962	1	9329	9329		38.806	0	1	1223300			50058	11410	33610	33623	56502	56502					0.10105915479596206
RPVSSNWNKR	10	Unmodified	_RPVSSNWNKR_					0	0	0			REV__ENSG00000144048|ENST00000272444|DUSP11	REV__ENSG00000144048|ENST00000272444|DUSP11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.8340454101562	2	622.336353	1242.65815	-0.073789	-4.5921E-05	0.18042	0.00011228	0.10664	6.6363E-05	622.3363752507829	111.19	1.2568	111.19	110.57	111.83	0					110	41	4	0	0	0	0.8492	1	11614	11614		8.6937	4.0811	1	190840	+		50059	19870	33611	33624	56503	56503					0.04652944608983489
RPVSSRSGARL	11	Unmodified	_RPVSSRSGARL_					0	0	0		nc|ENSG00000164125|Q6UWH4-3|GASK1B;ENSG00000164125|ENST00000585682|GASK1B;nc|ENSG00000164125|Q6UWH4-2|GASK1B	nc|ENSG00000164125|Q6UWH4-3|GASK1B	nc|ENSG00000164125|Q6UWH4-3|GASK1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.3436279296875	2	593.344178	1184.6738	0.89398	0.00053044	-0.36141	-0.00021444	0.53257	0.000316	593.3438403936742	103.36	2.3929	103.49	103.05	105.45	0.12621					170	59	5	0	0	0	0.69931	1	10910	10910		31.634	8.1116	1	4092800			50060	5922	33612	33625	56504	56504					0.08885231126032522
RPVSVGKQVLL	11	Unmodified	_RPVSVGKQVLL_					0	0	0			REV__nc|ENSG00000133107|Q9UBN4-4|TRPC4	REV__nc|ENSG00000133107|Q9UBN4-4|TRPC4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.382080078125	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.73893	1	2800	2800		24.519	7.1542	1	352020	+		50061	19056	33613	33626	56505	56505					0.15525931110846614
RPVVKQVQEKV	11	Unmodified	_RPVVKQVQEKV_					0	0	0		ENSG00000125485|ENST00000372159|DDX31;nc|ENSG00000125485|Q9H8H2-2|DDX31;nc|ENSG00000125485|Q9H8H2|DDX31;nc|ENSG00000125485|Q9H8H2-6|DDX31;ENST00000482620.1_1_9:135536593-135545636:-|nuORF;nc|ENSG00000125485|Q9H8H2-3|DDX31;nc|ENSG00000125485|Q9H8H2-4|DDX31	ENSG00000125485|ENST00000372159|DDX31	ENSG00000125485|ENST00000372159|DDX31	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2674865722656	3	437.269866	1308.78777	-0.73822	-0.0003228	-3.8393	-0.0016788	-4.5775	-0.0020016	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.76892	1	4623	4623		17.833	4.8757	1	3639500			50062	3393	33614	33627	56506	56506					0.1457270116827658
RPVVKTQKPTH	11	Unmodified	_RPVVKTQKPTH_					0	0	0		ENST00000404930.1_1_6:106115422-106115650:+|nuORF	ENST00000404930.1_1_6:106115422-106115650:+|nuORF	ENST00000404930.1_1_6:106115422-106115650:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	645.8847045898438	2	645.885678	1289.7568	-0.0028617	-1.8483E-06	-3.2149	-0.0020765	-3.2178	-0.0020783	645.8834752431377	105.95	1.6411	105.93	105.23	106.87	-0.025146					92	38	3	0	0	0	0.73893	1	11473	11473		24.519	1.4767	1	1736300			50063	11261	33615	33628	56507	56507					0.12351547854018463
RPVVKTQKPTH	11	Unmodified	_RPVVKTQKPTH_					0	0	0		ENST00000404930.1_1_6:106115422-106115650:+|nuORF	ENST00000404930.1_1_6:106115422-106115650:+|nuORF	ENST00000404930.1_1_6:106115422-106115650:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	645.8839721679688	2	645.885678	1289.7568	0.94469	0.00061016	-3.1472	-0.0020327	-2.2025	-0.0014226	645.8834905061026	106.24	1.3631	106.34	106.15	107.51	0.099007					90	32	3	0	0	0	0.74763	1	11401	11401		22.58	0.61977	1	2119300			50064	11261	33615	33628	56508	56508					0.12351547854018463
RPVVKTQKPTH	11	Unmodified	_RPVVKTQKPTH_					0	0	0		ENST00000404930.1_1_6:106115422-106115650:+|nuORF	ENST00000404930.1_1_6:106115422-106115650:+|nuORF	ENST00000404930.1_1_6:106115422-106115650:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.8840942382812	2	645.885678	1289.7568	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.47	1	105.54	105.04	106.04	0.073112								0	0	0	0.56276	1	11178	11178		29.17	3.1067	1				50065	11261	33615	33628	56509	56509					0.12351547854018463
RPVVSRSGK	9	Unmodified	_RPVVSRSGK_					0	0	0			REV__ENSG00000075539|ENST00000358350|FRYL	REV__ENSG00000075539|ENST00000358350|FRYL	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.2988586425781	2	493.298707	984.582862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.825	1	16.214	15.714	16.714	-0.6107								0	0	0	0.30053	1	182	182		30.504	2.6214	1		+		50066	16712	33616	33629	56510	56510					0.08995387148570444
RPWARFYVRLY	11	Unmodified	_RPWARFYVRLY_					0	0	0		ENSG00000214814|ENST00000522917|FER1L6	ENSG00000214814|ENST00000522917|FER1L6	ENSG00000214814|ENST00000522917|FER1L6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.9505310058594	3	509.617489	1525.83064	-1.755	-0.00089438	-3.5934	-0.0018313	-5.3484	-0.0027256	509.61555556193184	28.54	1.0683	28.54	27.927	28.995	0					107	46	3	0	0	0	0.71207	1	1169	1169		29.551	10.288	1	157640			50067	8638	33617	33630	56511	56511					0.08875516016337315
RPWLRREPLVT	11	Unmodified	_RPWLRREPLVT_					0	0	0			REV__ENSG00000065325|ENST00000262441|GLP2R	REV__ENSG00000065325|ENST00000262441|GLP2R	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.9510803222656	3	474.949127	1421.82555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.186	1	26.863	26.363	27.363	-0.3228								0	0	0	0.56276	1	1560	1560		17.833	2.5	1		+		50068	16496	33618	33631	56512	56512					0.1315121215372983
RPWNPRRWWRW	11	Unmodified	_RPWNPRRWWRW_					0	0	0		ENST00000564348.5_1_19:7982609-7983760:+|nuORF;ENST00000566166.1_1_19:7982552-7983971:+|nuORF	ENST00000564348.5_1_19:7982609-7983760:+|nuORF	ENST00000564348.5_1_19:7982609-7983760:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	565.9671020507812	3	565.967515	1694.88072	-0.46327	-0.00026219	3.0335	0.0017169	2.5702	0.0014547	565.9692580432492	24.181	0.83909	24.236	23.869	24.708	0.055487					47	20	3	0	0	0	0.93527	1	879	879		0.37141	0.03091	1	101800			50069	13885	33619	33632	56513	56513					0.061070634648785926
RPWNPRRWWRW	11	Unmodified	_RPWNPRRWWRW_					0	0	0		ENST00000564348.5_1_19:7982609-7983760:+|nuORF;ENST00000566166.1_1_19:7982552-7983971:+|nuORF	ENST00000564348.5_1_19:7982609-7983760:+|nuORF	ENST00000564348.5_1_19:7982609-7983760:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	565.96875	3	565.967515	1694.88072	1.1175	0.00063245	1.4149	0.00080078	2.5323	0.0014332	565.968273554953	24.406	0.80824	24.362	24.024	24.832	-0.043222					47	17	3	0	0	0	0.91779	1	901	901		1.523	0.10423	1	110370			50070	13885	33619	33632	56514	56514					0.061070634648785926
RPWPRARRL	9	Unmodified	_RPWPRARRL_					0	0	0			REV__ENST00000503252.1_1_5:1463768-1467406:-|nuORF	REV__ENST00000503252.1_1_5:1463768-1467406:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3663940429688	2	604.36779	1206.72103	-1.2751	-0.00077064	-0.16834	-0.00010174	-1.4435	-0.00087239	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.7932	1	12948	12948		24.203	4.206	1	3346600	+		50071	27842	33620	33633	56515	56515					0.12593555187686434
RPWRLKRRW	9	Unmodified	_RPWRLKRRW_					0	0	0		ENST00000505606.6_1_5:43121886-43122210:+|nuORF	ENST00000505606.6_1_5:43121886-43122210:+|nuORF	ENST00000505606.6_1_5:43121886-43122210:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.2784729003906	3	451.942418	1352.80543	0.028854	1.304E-05	1.8892	0.0008538	1.918	0.00086684	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.7932	1	4897	4897		14.137	0.62918	1	513120			50072	12925	33621	33634	56516	56516					0.14313506004441479
RPWRPHWWRKV	11	Unmodified	_RPWRPHWWRKV_					0	0	0		ENST00000366955.7_1_1:214819175-214819226:+|nuORF	ENST00000366955.7_1_1:214819175-214819226:+|nuORF	ENST00000366955.7_1_1:214819175-214819226:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7615966796875	3	535.300494	1602.87965	0.41233	0.00022072	3.9341	0.0021059	4.3465	0.0023267	535.3036088095746	49.775	0.16659	50.62	50.558	50.724	0.84501					5	3	2	0	0	0	0.1838	1	4879	4879		3.2113	2.8991	1	145680			50073	10523	33622	33635	56517	56517					0.10232849095928032
RPYRRLQRKSR	11	Unmodified	_RPYRRLQRKSR_					0	0	0			REV__nc|ENSG00000008277|Q9P0K1-4|ADAM22	REV__nc|ENSG00000008277|Q9P0K1-4|ADAM22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.9753723144531	3	505.974558	1514.90185	1.8418	0.00093188	-2.4173	-0.0012231	-0.57557	-0.00029122	505.97323302484097	107.86	0.30511	107.95	107.71	108.01	0.084465					27	9	4	0	0	0	0.79716	1	13154	13154		11.932	2.2862	1	9659400	+		50074	16131	33623	33636	56518	56518					0.16499028773705504
RQAAPQPALQ	10	Unmodified	_RQAAPQPALQ_					0	0	0			REV__ENST00000510241.5_2_5:139943677-139944139:-|nuORF	REV__ENST00000510241.5_2_5:139943677-139944139:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.3023681640625	2	540.301447	1078.58834	0.044559	2.4075E-05	2.548	0.0013767	2.5926	0.0014008	540.3021594373678	24.358	0.8342	23.976	23.407	24.241	-0.38178					27	18	2	0	0	0	0.77314	1	1166	1166		40.778	9.2484	1	211490	+		50075	27948	33624	33637	56519	56519					0.052190659403549944
RQAARPGG	8	Unmodified	_RQAARPGG_					0	0	0		ENST00000355083.9_1_3:52931309-52931540:-|nuORF	REV__ENST00000512731.5_1_1:1567737-1568735:+|nuORF	REV__ENST00000512731.5_1_1:1567737-1568735:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.7294921875	2	406.727918	811.441283	-1.8366	-0.00074698	2.3676	0.00096298	0.53106	0.000216	406.7287979203731	76.234	2.0799	76.359	74.725	76.805	0.12485					97	60	2	0	0	0	0.86288	1	7045	7045		26.796	0	1	145690			50076	24211	33625	33638	56520	56520					0.028020138460874477
RQAERAPIRK	10	Unmodified	_RQAERAPIRK_					0	0	0		ENST00000441379.5_1_21:46341018-46341171:+|nuORF	ENST00000441379.5_1_21:46341018-46341171:+|nuORF	ENST00000441379.5_1_21:46341018-46341171:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.9161682128906	3	408.914305	1223.72109	0.12958	5.2985E-05	3.8741	0.0015842	4.0037	0.0016372	408.91564763308895	18.275	0.41199	17.654	17.447	17.859	-0.62141					20	8	3	0	0	0	0.85979	1	367	367		35.178	1.0917	1	229150			50077	11784	33626	33639	56521	56521					0.11817510397008846
RQAERKLIIL	10	Unmodified	_RQAERKLIIL_					0	0	0			REV__ENST00000472821.5_1_3:149814257-149842756:+|nuORF	REV__ENST00000472821.5_1_3:149814257-149842756:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.93243408203125	3	413.934706	1238.78229	-1.1382	-0.00047114	-3.9325	-0.0016278	-5.0707	-0.002099	413.9330056480743	43.336	2.2043	43.3	41.98	44.184	-0.03582					131	52	3	0	0	0	0.85633	1	3401	3401		21.686	5.679	1	471060	+		50078	27268	33627	33640	56522	56522					0.17245022376482666
RQAGKTTHLF	10	Unmodified	_RQAGKTTHLF_					0	0	0		nc|ENSG00000160695|Q9H270|VPS11;ENSG00000160695|ENST00000621676|VPS11;ENST00000529545.1_1_11:118940277-118941110:+|nuORF	nc|ENSG00000160695|Q9H270|VPS11	nc|ENSG00000160695|Q9H270|VPS11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.7909545898438	2	579.822547	1157.63054	-0.63005	-0.00036532	1.8121	0.0010507	1.182	0.00068537	579.8234595058453	19.987	0.41508	19.358	19.075	19.49	-0.6296					12	8	2	0	0	0	0.37624	1	586	586		35.152	0	1	66436			50079	5598	33628	33641	56523	56523					0.0580304134873586
RQAIGHNENSL	11	Unmodified	_RQAIGHNENSL_					0	0	0			REV__ENSG00000151655|ENST00000358415|ITIH2	REV__ENSG00000151655|ENST00000358415|ITIH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	620.3126831054688	2	619.81545	1237.61635	1.1883	0.00073655	-3.1003	-0.0019216	-1.912	-0.0011851	619.8130616287558	54.182	0.67599	54.238	53.825	54.501	0.055614					33	21	2	0	0	0	0.70278	1	4474	4474		16.007	0	1	159180	+		50080	20263	33629	33642	56524	56524					0.007043441298037578
RQAKKQKTRRT	11	Unmodified	_RQAKKQKTRRT_					0	0	0		ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENST00000570346.1_2_16:16387929-16388153:+|nuORF;ENST00000573635.1_1_16:16381587-16388153:+|nuORF;ENST00000566823.1_1_16:14982940-14989499:+|nuORF	ENSG00000185164|ENST00000622306|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.6236572265625	3	467.623414	1399.84841	0.7713	0.00036068	-0.39618	-0.00018526	0.37512	0.00017541	467.623137961311	107.87	0.64194	107.95	107.37	108.01	0.084404					70	15	6	0	0	0	0.75457	1	11546	11546		21.032	0.71722	1	22591000			50081	2066	33630	33643	56525	56525					0.16448231271192526
RQAKTGAT	8	Unmodified	_RQAKTGAT_					0	0	0		ENSG00000131437|ENST00000403231|KIF3A;nc|ENSG00000131437|Q9Y496|KIF3A	ENSG00000131437|ENST00000403231|KIF3A	ENSG00000131437|ENST00000403231|KIF3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7365417480469	2	416.735409	831.456264	1.1926	0.00049701	2.6189	0.0010914	3.8116	0.0015884	416.73649279228607	34.708	1.0492	34.918	34.769	35.819	0.21003					42	26	4	0	0	0	0.89679	1	2588	2588		37.812	2.1932	1	2080600			50082	3731	33631	33644	56526	56526					0.03379460923406441
RQAPREEHD	9	Unmodified	_RQAPREEHD_					0	0	0			REV__ENST00000528599.1_1_6:111894079-111913289:-|nuORF	REV__ENST00000528599.1_1_6:111894079-111913289:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.2757568359375	2	569.273418	1136.53228	0.45077	0.00025661	2.0994	0.0011951	2.5502	0.0014517	569.274532960243	58.596	0.96936	58.683	58.327	59.296	0.087002					138	45	4	0	0	0	0.67345	1	4965	4965		42.396	2.338	1	2576000	+		50083	16423	33632	33645	56527	56527					-0.030521869671019886
RQARRVPKRRR	11	Unmodified	_RQARRVPKRRR_					0	0	0			REV__ENST00000355379.3_1_1:155231889-155232135:-|nuORF	REV__ENST00000355379.3_1_1:155231889-155232135:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.6488952636719	3	493.650297	1477.92906	-1.6053	-0.00079248	0.086347	4.2625E-05	-1.519	-0.00074985	493.6501931782481	44.56	1.836	44.56	43.623	45.459	0					138	44	4	0	0	0	0.7896	1	3146	3146		13.508	3.8618	1	434870	+		50084	25376	33633	33646	56528	56528					0.20921557104770727
RQARRVPKRRR	11	Unmodified	_RQARRVPKRRR_					0	0	0			REV__ENST00000355379.3_1_1:155231889-155232135:-|nuORF	REV__ENST00000355379.3_1_1:155231889-155232135:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.64947509765625	3	493.650297	1477.92906	0.24426	0.00012058	-1.7465	-0.00086216	-1.5022	-0.00074159	493.6494164548298	44.568	2.4513	44.545	43.895	46.346	-0.023079					82	57	2	0	0	0	0.81021	1	3475	3475		9.2118	0.41249	1	516410	+		50085	25376	33633	33646	56529	56529					0.20921557104770727
RQARRVPKRRR	11	Unmodified	_RQARRVPKRRR_					0	0	0			REV__ENST00000355379.3_1_1:155231889-155232135:-|nuORF	REV__ENST00000355379.3_1_1:155231889-155232135:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.64959716796875	3	493.650297	1477.92906	-0.87643	-0.00043265	-0.41632	-0.00020552	-1.2928	-0.00063817	493.64998188310005	44.669	3.6346	44.636	43.623	47.257	-0.033474					240	86	4	0	0	0	0.79224	1	3619	3619		12.957	0.52465	1	495450	+		50086	25376	33633	33646	56530	56530					0.20921557104770727
RQARRVPKRRR	11	Unmodified	_RQARRVPKRRR_					0	0	0			REV__ENST00000355379.3_1_1:155231889-155232135:-|nuORF	REV__ENST00000355379.3_1_1:155231889-155232135:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.6492919921875	3	493.650297	1477.92906	-1.933	-0.00095422	0.25567	0.00012621	-1.6773	-0.00082801	493.6503528777543	42.447	1.0166	42.881	42.485	43.502	0.4334					81	24	4	0	0	0	0.84494	1	3788	3788		6.3209	0.31984	1	1368700	+		50087	25376	33633	33646	56531	56531					0.20921557104770727
RQARSRRPLVS	11	Unmodified	_RQARSRRPLVS_					0	0	0			REV__ENST00000374677.7_1_6:33170186-33170441:+|nuORF	REV__ENST00000374677.7_1_6:33170186-33170441:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.59912109375	3	442.600609	1324.78	-0.78528	-0.00034757	-1.6318	-0.00072222	-2.417	-0.0010698	442.5997035886443	48.9	1.7146	48.875	48.139	49.854	-0.025112					92	38	3	0	0	0	0.73277	1	4162	4162		25.892	2.5138	1	323300	+		50088	25790	33634	33647	56532	56532					0.13059986691359882
RQARVLAQA	9	Unmodified	_RQARVLAQA_					0	0	0		ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8001708984375	2	506.804157	1011.59376	-1.4266	-0.00072302	-3.9261	-0.0019897	-5.3527	-0.0027128	506.8022071365967	51.979	1.1494	51.979	51.46	52.609	0					48	30	2	0	0	0	0.78058	1	4246	4246		30.504	2.6214	1	87647			50089	6723	33635	33648	56533	56533					0.08842789522839212
RQASSGTIIL	10	Unmodified	_RQASSGTIIL_					0	0	0		nc|ENSG00000123338|P55160-2|NCKAP1L;ENSG00000123338|ENST00000293373|NCKAP1L	nc|ENSG00000123338|P55160-2|NCKAP1L	nc|ENSG00000123338|P55160-2|NCKAP1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3037719726562	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.70553	1	10319	10319		44.377	3.599	1	13160000			50090	3268	33636	33649	56534	56534					0.07224530363305348
RQATGVPA	8	Unmodified	_RQATGVPA_					0	0	0			REV__ENST00000466543.1_1_7:6210722-6211705:-|nuORF	REV__ENST00000466543.1_1_7:6210722-6211705:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2248229980469	2	400.224677	798.434801	-0.90021	-0.00036028	3.7777	0.0015119	2.8775	0.0011517	400.22605803281857	41.083	1.6559	41.475	40.867	42.523	0.39209					92	45	3	0	0	0	0.87479	1	3563	3563		30.504	1.3541	1	2260300	+		50091	27133	33637	33650	56535	56535					0.027520758947048307
RQCAPHGG	8	Unmodified	_RQCAPHGG_					0	0	0			REV__nc|ENSG00000174945|Q400G9-2|AMZ1	REV__nc|ENSG00000174945|Q400G9-2|AMZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.1943359375	2	413.192854	824.371155	0.11885	4.911E-05	1.9342	0.00079919	2.053	0.0008483	413.19356375040996	78.966	3.3342	78.912	78.52	81.854	-0.053558					185	96	2	0	0	0	0.9159	1	7991	7991		44.531	3.9584	1	948300	+		50092	30046	33638	33651	56536	56536					-0.048056078140234604
RQCAPHGG	8	Unmodified	_RQCAPHGG_					0	0	0			REV__nc|ENSG00000174945|Q400G9-2|AMZ1	REV__nc|ENSG00000174945|Q400G9-2|AMZ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.19384765625	2	413.192854	824.371155	0.80605	0.00033306	0.72513	0.00029962	1.5312	0.00063267	413.1932379055747	78.047	2.9824	78.452	77.977	80.959	0.4053					181	70	5	0	0	0	0.87276	3	9027	9004;9027;9040		44.531	16.277	1	5554900	+		50093	30046	33638	33651	56537;56538;56539	56538					-0.048056078140234604
RQCAPHGG	8	Unmodified	_RQCAPHGG_					0	0	0			REV__nc|ENSG00000174945|Q400G9-2|AMZ1	REV__nc|ENSG00000174945|Q400G9-2|AMZ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.194091796875	2	413.192854	824.371155	-0.086313	-3.5664E-05	0.8817	0.00036431	0.79539	0.00032865	413.1936016248627	77.941	2.7232	78.504	78.093	80.816	0.56332					177	64	5	0	0	0	0.82464	2	9040	9040;9055		37.028	0	1	6380300	+		50094	30046	33638	33651	56540;56541	56540					-0.048056078140234604
RQDGEAGH	8	Unmodified	_RQDGEAGH_					0	0	0		ENST00000517309.5_1_8:97274228-97274306:+|nuORF	ENST00000517309.5_1_8:97274228-97274306:+|nuORF	ENST00000517309.5_1_8:97274228-97274306:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.18621826171875	2	435.196648	868.378742	1.4685	0.00063907	-1.4662	-0.00063808	0.0022692	9.8755E-07	435.19586987158374	97.669	1.3483	98.06	97.282	98.63	0.39065					50	32	2	0	0	0	0.4196	1	11707	11707		55.504	27.622	1	211660			50095	13096	33639	33652	56542	56542					-0.06071177012756834
RQDGEAGH	8	Unmodified	_RQDGEAGH_					0	0	0		ENST00000517309.5_1_8:97274228-97274306:+|nuORF	ENST00000517309.5_1_8:97274228-97274306:+|nuORF	ENST00000517309.5_1_8:97274228-97274306:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	435.196648	868.378742	1.3077	0.00056912	-1.4877	-0.00064742	-0.17993	-7.8303E-05	435.19568083899765	97.692	1.1588	98.077	97.557	98.716	0.38548	0.0088196	-1.2405E-05	NaN	55.504	37	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	158360			50096	13096	33639	33652							-0.06071177012756834
RQDKLKVHMR	10	Unmodified	_RQDKLKVHMR_					0	0	0		ENSG00000178951|ENST00000322357|ZBTB7A	ENSG00000178951|ENST00000322357|ZBTB7A	ENSG00000178951|ENST00000322357|ZBTB7A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2681884765625	3	437.587312	1309.74011	0.28815	0.00012609	3.0769	0.0013464	3.3651	0.0014725	437.58868354878183	50.837	0.53022	50.887	50.612	51.142	0.049896					45	17	3	0	0	0	0.37624	1	4021	4021		38.754	15.376	1	299880			50097	7234	33640	33653	56543	56543					0.09762723696417197
RQEALGAR	8	Unmodified	_RQEALGAR_					0	0	0		nc|ENSG00000107282|Q02410-2|APBA1;ENSG00000107282|ENST00000265381|APBA1	nc|ENSG00000107282|Q02410-2|APBA1	nc|ENSG00000107282|Q02410-2|APBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7547912597656	2	450.754133	899.493713	-1.264	-0.00056978	1.3912	0.00062708	0.12712	5.7301E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.87479	1	7676	7676		30.504	0	1	414240			50098	2341	33641	33654	56544	56544					0.03994552189044498
RQEARGAL	8	Unmodified	_RQEARGAL_					0	0	0		nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;ENSG00000087087|ENST00000611405|SRRT	nc|ENSG00000087087|Q9BXP5-4|SRRT	nc|ENSG00000087087|Q9BXP5-4|SRRT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7535400390625	2	450.754133	899.493713	0.5597	0.00025229	-0.48919	-0.0002205	0.070512	3.1784E-05	450.7538239580323	79.562	2.1146	79.701	78.151	80.265	0.13883					102	73	2	0	0	0	0.87479	1	7503	7503		30.504	0	1	128600			50099	1566	33642	33655	56545	56545					0.03994552189033129
RQEQLQLI	8	Unmodified	_RQEQLQLI_					0	0	0		nc|ENSG00000064042|Q9UPQ0-9|LIMCH1;nc|ENSG00000064042|Q9UPQ0-8|LIMCH1;nc|ENSG00000064042|Q9UPQ0-6|LIMCH1;nc|ENSG00000064042|Q9UPQ0-5|LIMCH1;nc|ENSG00000064042|Q9UPQ0-10|LIMCH1;nc|ENSG00000064042|Q9UPQ0-2|LIMCH1;nc|ENSG00000064042|Q9UPQ0-4|LIMCH1;nc|ENSG00000064042|Q9UPQ0|LIMCH1;nc|ENSG00000064042|Q9UPQ0-3|LIMCH1;ENSG00000064042|ENST00000503057|LIMCH1	nc|ENSG00000064042|Q9UPQ0-9|LIMCH1	nc|ENSG00000064042|Q9UPQ0-9|LIMCH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	514.2982177734375	2	514.298373	1026.58219	-0.29361	-0.00015101	-0.83044	-0.00042709	-1.1241	-0.0005781	514.298462804293	96.228	2.3462	96.459	94.984	97.33	0.23103					132	55	3	0	0	0	0.86677	1	9896	9896		27.882	1.1893	1	616300			50100	1097	33643	33656	56546	56546					0.0699654770885445
RQESRGHLLI	10	Unmodified	_RQESRGHLLI_					0	0	0			REV__ENST00000272839.7_2_2:208489082-208489175:-|nuORF	REV__ENST00000272839.7_2_2:208489082-208489175:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8456420898438	2	604.846553	1207.67855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.872	1	96.816	96.316	97.316	-0.056381								0	0	0	0.45132	1	10400	10400		25.574	3.8883	1		+		50101	24551	33644	33657	56547	56547					0.08302115268816124
RQEVRRVF	8	Unmodified	_RQEVRRVF_					0	0	0			REV__ENST00000515144.5_1_5:14293150-14488426:+|nuORF	REV__ENST00000515144.5_1_5:14293150-14488426:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3185424804688	2	545.317432	1088.62031	-1.4651	-0.00079892	0.057523	3.1368E-05	-1.4075	-0.00076755	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.86677	1	8503	8503		27.882	3.3631	1	4998200	+		50102	16304	33645	33658	56548	56548					0.07954478414194455
RQFLRRVPH	9	Unmodified	_RQFLRRVPH_					0	0	0			REV__nc|ENSG00000143473|O95259-2|KCNH1	REV__nc|ENSG00000143473|O95259-2|KCNH1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.57440185546875	3	403.575624	1207.70504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.937	1	81.042	80.542	81.542	0.10527								0	0	0	0.33301	1	7688	7688		26.693	7.4302	1		+		50103	19813	33646	33659	56549	56549					0.10949848950781416
RQFLSTCV	8	Unmodified	_RQFLSTCV_					0	0	0		ENSG00000164296|ENST00000296736|TIGD6	ENSG00000164296|ENST00000296736|TIGD6	ENSG00000164296|ENST00000296736|TIGD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.24920654296875	2	477.247295	952.480036	0.42784	0.00020419	-2.0067	-0.00095767	-1.5788	-0.00075348	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.92457	1	7159	7159		47.916	5.4411	1	2278400			50104	5947	33647	33660	56550	56550					0.0018955836558234296
RQFTTLTQ	8	Unmodified	_RQFTTLTQ_					0	0	0			REV__ENSG00000141540|ENST00000269346|TTYH2	REV__ENSG00000141540|ENST00000269346|TTYH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7705993652344	2	497.769448	993.524344	2.1837	0.001087	0.94386	0.00046982	3.1275	0.0015568	497.7697728239385	26.206	1.1075	25.866	25.53	26.637	-0.34035					61	24	4	0	0	0	0.13608	2	1434	1412;1434		113.41	3.7476	1	2042700	+		50105	19693	33648	33661	56551;56552	56552					0.027322857834292336
RQFYKKVALI	10	Unmodified	_RQFYKKVALI_					0	0	0			REV__ENSG00000228083|ENST00000380222|IFNA14	REV__ENSG00000228083|ENST00000380222|IFNA14	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.368896484375	2	633.390065	1264.76558	-1.1808	-0.00074793	-1.5912	-0.0010079	-2.7721	-0.0017558	633.3884333967615	97.588	0.38809	97.79	97.685	98.073	0.20207					10	8	2	0	0	0	0.37624	1	10064	10064		34.173	19.308	1	71927	+		50106	19358	33649	33662	56553	56553					0.14378521490516505
RQGAGHLI	8	Unmodified	_RQGAGHLI_					0	0	0		ENST00000291672.5_1_21:47602757-47602988:-|nuORF	ENST00000291672.5_1_21:47602757-47602988:-|nuORF	ENST00000291672.5_1_21:47602757-47602988:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.24591064453125	2	426.245944	850.477334	-1.7038	-0.00072625	1.9277	0.00082165	0.22383	9.5406E-05	426.246697883185	87.448	3.9173	87.649	85.72	89.637	0.20114					165	92	2	0	0	0	0.86791	1	8645	8645		28.254	1.4582	1	4015800			50107	9684	33650	33663	56554	56554					0.046114710229517186
RQGFRSPAN	9	Unmodified	_RQGFRSPAN_					0	0	0			REV__chr18:51049324-51051377|15|19.6|0.0|20.9|+|2|SMAD4,None|1	REV__chr18:51049324-51051377|15|19.6|0.0|20.9|+|2|SMAD4,None|1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.81689453125	2	516.770314	1031.52608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.043	1	23.043	22.543	23.543	0								0	0	0	0.28386	1	711	711		37.159	2.9866	1		+		50108	15673	33651	33664	56555	56555					0.011573395920322582
RQGKAYVGYG	10	Unmodified	_RQGKAYVGYG_					0	0	0			REV__nc|ENSG00000060709|O15034-2|RIMBP2	REV__nc|ENSG00000060709|O15034-2|RIMBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.7866821289062	2	549.788173	1097.56179	-0.5678	-0.00031217	-1.6076	-0.00088383	-2.1754	-0.001196	549.7871709244522	110.43	1.0169	110.37	110.18	111.2	-0.055084					52	35	3	0	0	0	0.85939	1	11998	11998		23.042	3.0457	1	254500	+		50109	16451	33652	33665	56556	56556					0.016913770490191382
RQGKGGLT	8	Unmodified	_RQGKGGLT_					0	0	0		ENST00000408968.3_1_11:314037-314190:+|nuORF	ENST00000408968.3_1_11:314037-314190:+|nuORF	ENST00000408968.3_1_11:314037-314190:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.7392272949219	2	408.737951	815.46135	0.85094	0.00034781	3.3352	0.0013632	4.1861	0.001711	408.7393373651895	37.561	2.1469	37.572	37.24	39.387	0.011173					113	49	4	0	0	0	0.884	1	2510	2510		33.516	0	1	272800			50110	11294	33653	33666	56557	56557					0.04623764786038009
RQGLGAHT	8	Unmodified	_RQGLGAHT_					0	0	0		ENST00000256996.8_1_11:47260415-47260484:+|nuORF	ENST00000256996.8_1_11:47260415-47260484:+|nuORF	ENST00000256996.8_1_11:47260415-47260484:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22662353515625	2	420.227751	838.440949	-1.3512	-0.00056782	1.4844	0.0006238	0.13321	5.5978E-05	420.2282629742312	76.938	2.2039	76.938	74.958	77.162	0					134	85	2	0	0	0	0.87922	1	6935	6935		31.955	2.8053	1	154140			50111	9345	33654	33667	56558	56558					0.015265941262214255
RQGLIVLGSG	10	Unmodified	_RQGLIVLGSG_					0	0	0			REV__ENST00000488316.1_1_20:62290811-62293163:+|nuORF	REV__ENST00000488316.1_1_20:62290811-62293163:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.7974853515625	2	500.300916	998.587279	-0.49899	-0.00024965	-1.8368	-0.00091894	-2.3358	-0.0011686	500.7979207845338	94.274	1.5127	94.502	94.118	95.631	0.22863					94	36	5	0	0	0	0.8651	1	9614	9614		25.574	1.3713	1	781760	+		50112	25394	33655	33668	56559	56559					0.08792851571479332
RQGLVDRAQQL	11	Unmodified	_RQGLVDRAQQL_					0	0	0		ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	ENSG00000130702|ENST00000252999|LAMA5	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	642.3659057617188	2	642.362567	1282.71058	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.08	1	111.08	110.58	111.58	0								0	0	0	0.56276	1	11553	11553		26.063	0.48933	1				50113	3668	33656	33669	56560	56560					0.0805348295193653
RQGPGPPAGLA	11	Unmodified	_RQGPGPPAGLA_					0	0	0		chr9:93452389-93497471|13|18.0|0.28|6.03|+|2|FAM120A,FAM120A|1	chr9:93452389-93497471|13|18.0|0.28|6.03|+|2|FAM120A,FAM120A|1	chr9:93452389-93497471|13|18.0|0.28|6.03|+|2|FAM120A,FAM120A|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.7810363769531	2	510.78289	1019.55123	-0.062615	-3.1982E-05	0.15109	7.7173E-05	0.088474	4.5191E-05	510.7827979768825	26.396	0.70906	26.358	26.096	26.805	-0.038523					36	14	3	0	0	0	0.68378	1	1209	1209		34.173	0	1	179820			50114	532	33657	33670	56561	56561					0.042233943946030195
RQGRPVDSPL	10	Unmodified	_RQGRPVDSPL_					0	0	0			REV__ENST00000587013.5_1_19:38882915-38886805:+|nuORF	REV__ENST00000587013.5_1_19:38882915-38886805:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.8121948242188	2	562.812179	1123.60981	0.97983	0.00055146	-0.99692	-0.00056108	-0.01709	-9.6183E-06	562.8115524950313	17.369	0.36333	16.886	16.672	17.035	-0.48256					9	7	2	0	0	0	0.70553	1	251	251		44.377	2.9506	1	132560	+		50115	29120	33658	33671	56562	56562					0.052944509690860286
RQGRSRRRRSL	11	Unmodified	_RQGRSRRRRSL_					0	0	0			REV__ENST00000490467.5_1_3:135684657-135745681:+|nuORF	REV__ENST00000490467.5_1_3:135684657-135745681:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6239318847656	3	476.622407	1426.84539	2.8112	0.0013399	-0.11084	-5.2828E-05	2.7004	0.0012871	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.77205	2	12837	12837;13097		17.167	3.4992	1	2689700	+		50116	27636	33659	33672	56563;56564	56563					0.1490440093707548
RQGSPKPAS	9	Unmodified	_RQGSPKPAS_					0	0	0		ENST00000436944.5_1_7:73101164-73117856:+|nuORF	ENST00000436944.5_1_7:73101164-73117856:+|nuORF	ENST00000436944.5_1_7:73101164-73117856:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.25396728515625	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.78983	1	8428	8428		27.882	1.1893	1	1449300			50117	11727	33660	33673	56565	56565					0.027191324691784757
RQGTLVPKQH	10	Unmodified	_RQGTLVPKQH_					0	0	0			REV__ENSG00000136261|ENST00000258761|BZW2	REV__ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.336181640625	2	582.335821	1162.65709	-0.42207	-0.00024579	0.66388	0.0003866	0.2418	0.00014081	582.3360730171839	20.278	0.90201	19.648	19.305	20.207	-0.6296					47	19	4	0	0	0	0.47091	1	627	627		58.23	0	1	811170	+		50118	19299	33661	33674	56566	56566					0.0822673024008509
RQGVTITITG	10	Unmodified	_RQGVTITITG_					0	0	0			REV__nc|ENSG00000131016|Q02952-2|AKAP12	REV__nc|ENSG00000131016|Q02952-2|AKAP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3031616210938	2	523.303655	1044.59276	-0.1734	-9.0741E-05	-0.15994	-8.3699E-05	-0.33334	-0.00017444	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.86763	1	8692	8692		26.693	0	1	13808000	+		50119	29841	33662	33675	56567	56567					0.07224530363282611
RQHQSLIH	8	Unmodified	_RQHQSLIH_					0	0	0			REV__nc|ENSG00000269343|E7ETH6|ZNF587B	REV__nc|ENSG00000269343|E7ETH6|ZNF587B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.78448486328125	2	509.780682	1017.54681	4.8147	0.0024544	3.936	0.0020065	8.7507	0.0044609	509.78234964261355	106.07	0.84253	106.25	105.87	106.71	0.18647					84	35	4	0	0	0	0.88944	1	12994	12994		57.811	0	1	596630	+		50120	23500	33663	33676	56568	56568					0.038739299717235554
RQHQSQVY	8	Unmodified	_RQHQSQVY_					0	0	0			REV__ENSG00000110871|ENST00000288532|COQ5	REV__ENSG00000110871|ENST00000288532|COQ5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.7610473632812	2	523.262322	1044.51009	-0.58611	-0.00030669	-3.5403	-0.0018525	-4.1264	-0.0021592	523.7610662863972	60.377	0.92597	60.408	60.027	60.953	0.0312					81	26	4	0	0	0	0.89457	1	5625	5625		37.028	1.8765	1	376950	+		50121	17836	33664	33677	56569	56569					-0.010383666448660733
RQHRVLSH	8	Unmodified	_RQHRVLSH_					0	0	0			REV__nc|ENSG00000124782|Q92766-5|RREB1	REV__nc|ENSG00000124782|Q92766-5|RREB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7933349609375	2	516.794124	1031.57369	0.82179	0.0004247	-2.0449	-0.0010568	-1.2231	-0.00063209	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.84341	1	9069	9069		24.203	0	1	858640	+		50122	18611	33665	33678	56570	56570					0.05917038582902023
RQIICSYLSQ	10	Carbamidomethyl (C)	_RQIIC(Carbamidomethyl (C))SYLSQ_	RQIIC(1)SYLSQ		RQIIC(110)SYLSQ		0	1	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3264770507812	2	634.326805	1266.63906	-0.8757	-0.00055548	-1.6041	-0.0010175	-2.4798	-0.001573	634.3257216778103	57.323	1.5327	57.717	57.284	58.816	0.39407					110	37	5	0	0	0	0.0353	1	6040	6040		112.41	16.596	1	4993700			50123	3805	33666	33679	56571	56571	52				0.01640227203051836
RQIKVEQLS	9	Unmodified	_RQIKVEQLS_					0	0	0			REV__chr12:49330573-49330661|62|27.55|0.49|5.81|+|ENST00000547923|TROAP,TROAP	REV__chr12:49330573-49330661|62|27.55|0.49|5.81|+|ENST00000547923|TROAP,TROAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.8237915039062	2	550.824755	1099.63496	-0.44868	-0.00024714	0.3526	0.00019422	-0.096078	-5.2922E-05	550.8247385084571	35.37	0.53049	35.376	35.126	35.656	0.0063896					22	11	3	0	0	0	0.76764	1	2218	2218		34.173	0	1	62674	+		50124	15537	33667	33680	56572	56572					0.0891250577167284
RQIKVEQLS	9	Unmodified	_RQIKVEQLS_					0	0	0			REV__chr12:49330573-49330661|62|27.55|0.49|5.81|+|ENST00000547923|TROAP,TROAP	REV__chr12:49330573-49330661|62|27.55|0.49|5.81|+|ENST00000547923|TROAP,TROAP	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	550.824755	1099.63496	-0.60357	-0.00033246	0.21956	0.00012094	-0.38401	-0.00021152	550.8247962929767	35.416	0.48347	35.404	35.17	35.654	-0.012203	0.022841	0.00015485	NaN	34.173	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70075	+		50125	15537	33667	33680							0.0891250577167284
RQIKVEQLS	9	Unmodified	_RQIKVEQLS_					0	0	0			REV__chr12:49330573-49330661|62|27.55|0.49|5.81|+|ENST00000547923|TROAP,TROAP	REV__chr12:49330573-49330661|62|27.55|0.49|5.81|+|ENST00000547923|TROAP,TROAP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	550.824755	1099.63496	-0.056174	-3.0942E-05	-0.38027	-0.00020946	-0.43644	-0.0002404	550.8245243972757	35.418	0.44541	35.362	35.205	35.651	-0.055904	-0.018399	-0.00050596	NaN	34.173	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86037	+		50126	15537	33667	33680							0.0891250577167284
RQIKVEQLS	9	Unmodified	_RQIKVEQLS_					0	0	0			REV__chr12:49330573-49330661|62|27.55|0.49|5.81|+|ENST00000547923|TROAP,TROAP	REV__chr12:49330573-49330661|62|27.55|0.49|5.81|+|ENST00000547923|TROAP,TROAP	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	550.824755	1099.63496	-0.44868	-0.00024714	0.3526	0.00019422	-0.096078	-5.2922E-05	550.8247385084571	35.37	0.53049	35.376	35.126	35.656	0.0063896	-0.0044415	0.00030141	NaN	34.173	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62674	+		50127	15537	33667	33680							0.0891250577167284
RQILIAKSPLA	11	Unmodified	_RQILIAKSPLA_					0	0	0		chr14:68468250-68470523|59|12.37|0.77|4.01|+|ENST00000554575|RAD51B,RAD51B;ENST00000469165.6_1_14:68353867-68935282:+|nuORF;ENST00000497460.5_1_14:68353747-69006933:+|nuORF;nc|ENSG00000182185|O15315-5|RAD51B;nc|ENSG00000182185|O15315-1|RAD51B;ENSG00000182185|ENST00000471583|RAD51B;nc|ENSG00000182185|O15315-4|RAD51B;nc|ENSG00000182185|O15315|RAD51B;chr14:68468250-68611006|58|23.07|0.65|5.15|+|ENST00000487861|RAD51B,RAD51B	chr14:68468250-68470523|59|12.37|0.77|4.01|+|ENST00000554575|RAD51B,RAD51B	chr14:68468250-68470523|59|12.37|0.77|4.01|+|ENST00000554575|RAD51B,RAD51B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.3882446289062	2	605.387522	1208.76049	0.95968	0.00058098	2.8271	0.0017115	3.7867	0.0022924	605.3891695017603	44.942	0.77081	44.954	44.509	45.28	0.012058					39	17	3	0	0	0	0.74002	1	3207	3207		27.047	11.041	1	312690			50128	175	33668	33681	56573	56573					0.16446217627890292
RQILLLPFPI	10	Unmodified	_RQILLLPFPI_					0	0	0		ENST00000378962.3_1_X:30578303-30578414:-|nuORF	ENST00000378962.3_1_X:30578303-30578414:-|nuORF	ENST00000378962.3_1_X:30578303-30578414:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.929443359375	3	403.928781	1208.76451	0.41682	0.00016837	1.3719	0.00055414	1.7887	0.0007225	403.92919444194524	46.164	0.84489	46.636	46.254	47.099	0.47139					60	20	4	0	0	0	0.88106	1	4354	4354		12.207	0	1	1771500			50129	10880	33669	33682	56574	56574					0.1684830712160874
RQILRSGD	8	Unmodified	_RQILRSGD_					0	0	0			REV__ENST00000523409.5_2_8:59347484-59360107:+|nuORF	REV__ENST00000523409.5_2_8:59347484-59360107:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7673645019531	2	472.76724	943.519927	-1.1355	-0.00053681	1.1341	0.00053614	-0.0014011	-6.6241E-07	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.7961	1	7815	7815		17.365	0	1	292450	+		50130	23676	33670	33683	56575	56575					0.04590821360523023
RQIPADANF	9	Unmodified	_RQIPADANF_					0	0	0		nc|ENSG00000293451|Q8IZJ6-3|TDH;nc|ENSG00000293451|Q8IZJ6-2|TDH;nc|ENSG00000293451|Q8IZJ6|TDH	nc|ENSG00000293451|Q8IZJ6-3|TDH	nc|ENSG00000293451|Q8IZJ6-3|TDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.2618408203125	2	516.267073	1030.51959	0.041796	2.1578E-05	-3.3015	-0.0017044	-3.2597	-0.0016829	516.265040455539	29.644	0.58671	29.6	29.428	30.015	-0.043095					23	14	3	0	0	0	0.76764	1	1555	1555		34.173	1.3601	1	32932			50131	15353	33671	33684	56576	56576					0.005554016406676965
RQIPFGDV	8	Unmodified	_RQIPFGDV_					0	0	0		ENSG00000129245|ENST00000250113|FXR2	ENSG00000129245|ENST00000250113|FXR2	ENSG00000129245|ENST00000250113|FXR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.25335693359375	2	466.253434	930.492316	0.40858	0.0001905	0.44177	0.00020598	0.85035	0.00039648	466.2535455662522	60.895	1.1821	61.014	60.015	61.197	0.11901					69	45	2	0	0	0	0.87922	1	5245	5245		31.955	3.7006	1	266480			50132	3579	33672	33685	56577	56577					0.024289181002927762
RQIWLLPT	8	Unmodified	_RQIWLLPT_					0	0	0			REV__ENST00000597095.5_1_19:19101856-19102289:-|nuORF	REV__ENST00000597095.5_1_19:19101856-19102289:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8086547851562	2	513.808377	1025.6022	-0.12671	-6.5103E-05	1.3179	0.00067714	1.1912	0.00061204	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.85277	1	4025	4025		25.45	1.2474	1	1731500	+		50133	29261	33673	33686	56578	56578					0.09042343439477918
RQKKPRRSR	9	Unmodified	_RQKKPRRSR_					0	0	0		ENSG00000043039|ENST00000281437|BARX2	ENSG00000043039|ENST00000281437|BARX2	ENSG00000043039|ENST00000281437|BARX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.589111328125	3	404.590045	1210.7483	-1.9042	-0.00077041	-0.15765	-6.3783E-05	-2.0618	-0.0008342	404.58983696837504	39.349	1.3734	39.36	38.786	40.16	0.010708					98	36	4	0	0	0	0.79277	1	2386	2386		27.047	3.6694	1	332570			50134	940	33674	33687	56579	56579					0.15136038728064705
RQKKYSSKIK	10	Unmodified	_RQKKYSSKIK_					0	0	0			REV__ENST00000430995.1_1_1:118183812-118184055:-|nuORF	REV__ENST00000430995.1_1_1:118183812-118184055:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.92828369140625	3	422.594461	1264.76155	-1.6666	-0.00070429	-1.2985	-0.00054872	-2.965	-0.001253	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.85285	1	4635	4635		16.717	0	1	771770	+		50135	26613	33675	33688	56580	56580					0.13976431996798055
RQKLGPTGG	9	Unmodified	_RQKLGPTGG_					0	0	0		ENST00000600479.5_1_19:40871764-40872336:+|nuORF;ENST00000392032.6_1_19:40871764-40872391:+|nuORF	ENST00000600479.5_1_19:40871764-40872336:+|nuORF	ENST00000600479.5_1_19:40871764-40872336:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2638854980469	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.74721	1	7882	7882		37.159	0	1	1458600			50136	11009	33676	33689	56581	56581					0.05435722848869773
RQKLGPTGG	9	Unmodified	_RQKLGPTGG_					0	0	0		ENST00000600479.5_1_19:40871764-40872336:+|nuORF;ENST00000392032.6_1_19:40871764-40872391:+|nuORF	ENST00000600479.5_1_19:40871764-40872336:+|nuORF	ENST00000600479.5_1_19:40871764-40872336:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2637939453125	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.78983	1	7547	7547		27.882	0	1	1262800			50137	11009	33676	33689	56582	56582					0.05435722848869773
RQKLLGFV	8	Unmodified	_RQKLLGFV_					0	0	0			REV__nc|ENSG00000143952|Q9P1Q0-4|VPS54	REV__nc|ENSG00000143952|Q9P1Q0-4|VPS54	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8009338378906	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.87276	1	9631	9631		29.842	5.6388	1	7439400	+		50138	19859	33677	33690	56583	56583					0.11022360785045748
RQKLLGFV	8	Unmodified	_RQKLLGFV_					0	0	0			REV__nc|ENSG00000143952|Q9P1Q0-4|VPS54	REV__nc|ENSG00000143952|Q9P1Q0-4|VPS54	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.80096435546875	2	480.803094	959.591636	-0.54823	-0.00026359	-4.2519	-0.0020443	-4.8001	-0.0023079	480.80093903656257	95.17	4.1898	95.217	94.619	98.809	0.046982					308	97	5	0	0	0	0.89457	1	10435	10435		37.028	3.5129	1	18729000	+		50139	19859	33677	33690	56584	56584					0.11022360785045748
RQKLLGFV	8	Unmodified	_RQKLLGFV_					0	0	0			REV__nc|ENSG00000143952|Q9P1Q0-4|VPS54	REV__nc|ENSG00000143952|Q9P1Q0-4|VPS54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.80078125	2	480.803094	959.591636	-0.2736	-0.00013155	-3.9156	-0.0018826	-4.1892	-0.0020142	480.80110367170755	95.033	3.9341	95.453	94.933	98.867	0.41964					263	95	5	0	0	0	0.86791	1	11450	11450		28.254	2.8041	1	9403500	+		50140	19859	33677	33690	56585	56585					0.11022360785045748
RQKLRLLTL	9	Unmodified	_RQKLRLLTL_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|126|3|sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|126|3|sense	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.877197265625	2	570.882407	1139.75026	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.372	1	20.448	19.948	20.948	0.075848								0	0	0	0.30778	1	499	499		27.882	4.8398	1		+		50141	29440	33678	33691	56586	56586					0.18597654693303411
RQKNKLFSLLP	11	Unmodified	_RQKNKLFSLLP_					0	0	0			REV__ENSG00000125351|ENST00000276201|UPF3B	REV__ENSG00000125351|ENST00000276201|UPF3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.609130859375	3	448.610111	1342.8085	-0.14494	-6.5021E-05	-1.758	-0.00078864	-1.9029	-0.00085366	448.9437169224278	77.071	0.84238	77.124	76.655	77.498	0.052704					75	41	2	0	0	0	0.76892	1	7439	7439		17.833	4.8757	1	780830	+		50142	18637	33679	33692	56587	56587					0.15081291547926412
RQKQLSKPVPG	11	Unmodified	_RQKQLSKPVPG_					0	0	0			REV__ENST00000507765.1_1_4:6290695-6304192:+|nuORF	REV__ENST00000507765.1_1_4:6290695-6304192:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.3720092773438	2	619.372404	1236.73025	-1.2262	-0.00075948	0.2128	0.0001318	-1.0134	-0.00062768	619.3724290211392	101.55	1.3094	101.7	101.32	102.63	0.15505					84	32	4	0	0	0	0.7434	1	10634	10634		23.523	0.94304	1	1786600	+		50143	17762	33680	33693	56588	56588					0.12135858962687962
RQKQVQSA	8	Unmodified	_RQKQVQSA_					0	0	0			REV__ENST00000579081.5_2_17:29626598-29701170:+|nuORF	REV__ENST00000579081.5_2_17:29626598-29701170:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7671813964844	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.89494	1	8457	8457		37.159	2.9866	1	547170	+		50144	23165	33681	33694	56589	56589					0.04590821360523023
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.6463928222656	3	483.646776	1447.9185	0.1589	7.6851E-05	-1.0109	-0.00048893	-0.85202	-0.00041208	483.6461692650574	46.582	1.726	46.568	46.059	47.785	-0.013821					190	48	5	0	0	0	0.91645	1	3712	3712		6.6596	0	1	4073800	+		50145	17657	33682	33695	56590	56590					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.646484375	3	483.646776	1447.9185	0.10651	5.1514E-05	-0.65271	-0.00031568	-0.54619	-0.00026416	483.6463288941527	48.079	2.6896	48.07	47.738	50.428	-0.0093269					180	66	5	0	0	0	0.91645	1	3974	3974		6.6596	0	1	2577700	+		50146	17657	33682	33695	56591	56591					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.6461486816406	3	483.646776	1447.9185	-0.78233	-0.00037837	-0.10537	-5.096E-05	-0.8877	-0.00042933	483.64658979005526	46.598	1.6296	46.569	46.013	47.642	-0.028782					170	44	5	0	0	0	0.89421	1	3858	3858		10.104	1.6966	1	5108400	+		50147	17657	33682	33695	56592	56592					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.64593505859375	3	483.646776	1447.9185	-1.6199	-0.00078345	0.75306	0.00036421	-0.86683	-0.00041924	483.64701567342865	46.699	1.7316	46.695	46.155	47.886	-0.0041618					198	50	6	0	0	0	0.89119	3	3843	3843;3862;3909		10.587	1.6966	1	5137200	+		50148	17657	33682	33695	56593;56594;56595	56593					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.64630126953125	3	483.646776	1447.9185	-0.83799	-0.00040529	0.055946	2.7058E-05	-0.78205	-0.00037823	483.646679966578	46.367	1.8019	46.382	45.827	47.628	0.015514					182	51	6	0	0	0	0.89119	3	3405	3405;3466;3479		10.587	2.1795	1	4521700	+		50149	17657	33682	33695	56596;56597;56598	56596					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.64630126953125	3	483.646776	1447.9185	0.29802	0.00014413	-1.074	-0.00051946	-0.77603	-0.00037532	483.6461229931169	46.466	1.647	46.505	45.984	47.631	0.038181					176	46	5	0	0	0	0.89119	1	3480	3480		10.587	0.94066	1	4692700	+		50150	17657	33682	33695	56599	56599					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.6460266113281	3	483.646776	1447.9185	-0.19648	-9.5025E-05	-0.60455	-0.00029239	-0.80103	-0.00038742	483.6463549494067	46.472	1.6155	46.393	45.933	47.548	-0.079002					182	48	5	0	0	0	0.91645	1	3482	3482		6.6596	0.33873	1	4742900	+		50151	17657	33682	33695	56600	56600					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.646484375	3	483.646776	1447.9185	-1.5634	-0.00075612	-0.22389	-0.00010828	-1.7873	-0.00086441	483.6466147917682	44.248	1.3424	45.092	44.653	45.995	0.84438					150	32	6	0	0	0	0.89119	1	4045	4045		10.587	0.94066	1	35535000	+		50152	17657	33682	33695	56601	56601					0.21245574450313143
RQKTQKKKWD	10	Unmodified	_RQKTQKKKWD_					0	0	0		ENST00000558197.1_1_15:33357172-33357250:-|nuORF	ENST00000558197.1_1_15:33357172-33357250:-|nuORF	ENST00000558197.1_1_15:33357172-33357250:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.26171875	3	449.261482	1344.76262	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.22	1	73.35	72.85	73.85	0.13064								0	0	0	0.45132	1	6750	6750		31.634	0	1				50153	13787	33683	33696	56602	56602					0.10402646365696455
RQLAPLPG	8	Unmodified	_RQLAPLPG_					0	0	0			REV__ENST00000373935.3_1_10:60027458-60027662:-|nuORF	REV__ENST00000373935.3_1_10:60027458-60027662:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2576599121094	2	426.25852	850.502486	0.79529	0.000339	-3.7264	-0.0015884	-2.9311	-0.0012494	426.2569520659769	34.417	1.2137	34.627	34.107	35.321	0.21002					70	29	4	0	0	0	0.86791	1	2540	2540		28.254	0	1	1482400	+		50154	25776	33684	33697	56603	56603					0.07125525825517798
RQLIAPIKMIL	11	Unmodified	_RQLIAPIKMIL_					0	0	0			REV__ENST00000462802.5_1_6:33384363-33384420:-|nuORF	REV__ENST00000462802.5_1_6:33384363-33384420:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3930053710938	2	648.415226	1294.8159	-1.1408	-0.00073974	0.48269	0.00031298	-0.65815	-0.00042676	648.4161480383999	107.03	0.24203	107.08	106.91	107.15	0.053749					6	5	2	0	0	0	0.17472	1	11415	11415		24.519	6.2571	1	344270	+		50155	27065	33685	33698	56604	56604					0.1802830782401088
RQLIAVGIRFH	11	Unmodified	_RQLIAVGIRFH_					0	0	0			REV__ENSG00000117597|ENST00000491415|UTP25	REV__ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2677001953125	3	437.266568	1308.77787	1.2133	0.00053055	1.7295	0.00075624	2.9428	0.0012868	437.2672396896614	50.554	1.7579	50.562	49.504	51.262	0.0077477					187	47	5	0	0	0	0.74771	1	4293	4293		22.562	3.2989	1	3327600	+		50156	18271	33686	33699	56605	56605					0.13583557953529635
RQLIAVGIRFH	11	Unmodified	_RQLIAVGIRFH_					0	0	0			REV__ENSG00000117597|ENST00000491415|UTP25	REV__ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26806640625	3	437.266568	1308.77787	-1.0896	-0.00047642	3.9608	0.0017319	2.8713	0.0012555	437.2682076309449	48.376	1.4718	48.845	48.119	49.591	0.46941					123	36	4	0	0	0	0.76892	1	4651	4651		17.833	0.6664	1	3096400	+		50157	18271	33686	33699	56606	56606					0.13583557953529635
RQLIAVGIRFH	11	Unmodified	_RQLIAVGIRFH_					0	0	0			REV__ENSG00000117597|ENST00000491415|UTP25	REV__ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26776123046875	3	437.266568	1308.77787	0.02954	1.2917E-05	2.8309	0.0012379	2.8604	0.0012508	437.26770833059527	48.1	1.3181	49.023	48.466	49.784	0.92315					115	32	4	0	0	0	0.75121	1	4645	4645		21.78	7.0868	1	3276900	+		50158	18271	33686	33699	56607	56607					0.13583557953529635
RQLLEWHAP	9	Unmodified	_RQLLEWHAP_					0	0	0			REV__ENST00000478856.5_1_3:100065035-100067726:+|nuORF	REV__ENST00000478856.5_1_3:100065035-100067726:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.3142700195312	2	575.311815	1148.60908	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.402	1	15.915	15.415	16.415	-0.48718								0	0	0	0.28386	1	126	126		37.159	5.6293	1		+		50159	18025	33687	33700	56608	56608					0.04071656320047623
RQLLPVRSKL	10	Unmodified	_RQLLPVRSKL_					0	0	0			REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|11|1|sense	REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|11|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.92950439453125	3	403.931185	1208.77173	0.077299	3.1223E-05	-4.2756	-0.001727	-4.1983	-0.0016958	403.92940947651834	46.41	0.88675	46.396	45.871	46.758	-0.013821					41	22	2	0	0	0	0.85251	1	3720	3720		14.086	4.4399	1	1235300	+		50160	29560	33688	33701	56609	56609					0.1756903972204782
RQLLPVRSKL	10	Unmodified	_RQLLPVRSKL_					0	0	0			REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|11|1|sense	REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|11|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9300231933594	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.87292	1	4021	4021		13.508	1.872	1	2612300	+		50161	29560	33688	33701	56610	56610					0.1756903972204782
RQLLPVRSKL	10	Unmodified	_RQLLPVRSKL_					0	0	0			REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|11|1|sense	REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|11|1|sense	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9297180175781	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.649	1	47.561	47.061	48.061	-0.087646								0	0	0	0.45132	1	3578	3578		9.2118	1.1774	1		+		50162	29560	33688	33701	56611	56611					0.1756903972204782
RQLLRGAESP	10	Unmodified	_RQLLRGAESP_					0	0	0		nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;ENSG00000135317|ENST00000314673|SNX14	nc|ENSG00000135317|Q9Y5W7-2|SNX14	nc|ENSG00000135317|Q9Y5W7-2|SNX14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.3172607421875	2	563.820004	1125.62546	-1.0471	-0.0005904	-3.9143	-0.002207	-4.9615	-0.0027974	563.8176364165028	57.434	0.57993	57.434	57.304	57.884	0					32	22	2	0	0	0	0.80179	1	4948	4948		39.253	1.4413	1	88435			50163	4004	33689	33702	56612	56612					0.0676673748612302
RQLLSVVKWSK	11	Unmodified	_RQLLSVVKWSK_					0	0	0		nc|ENSG00000082175|P06401-4|PGR;nc|ENSG00000082175|P06401-3|PGR;nc|ENSG00000082175|P06401-2|PGR;ENSG00000082175|ENST00000325455|PGR	nc|ENSG00000082175|P06401-4|PGR	nc|ENSG00000082175|P06401-4|PGR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.6092224121094	3	448.610111	1342.8085	0.51142	0.00022943	-2.2117	-0.00099217	-1.7002	-0.00076274	448.60891312566025	75.185	1.0571	75.23	74.705	75.762	0.04509					87	28	4	0	0	0	0.77511	1	7327	7327		16.53	0	1	364530			50164	1480	33690	33703	56613	56613					0.15081291547926412
RQLLYRSWFMW	11	Unmodified	_RQLLYRSWFMW_					0	0	0		nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:31904270-32000328:+|nuORF;nc|ENSG00000198089|A8K8P3-5|SFI1	nc|ENSG00000198089|A8K8P3-4|SFI1	nc|ENSG00000198089|A8K8P3-4|SFI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.2730712890625	3	529.274734	1584.80237	0.087973	4.6562E-05	-3.0282	-0.0016028	-2.9402	-0.0015562	529.6074494906942	71.247	0.96676	71.285	70.943	71.91	0.038055					159	46	4	0	0	0	0.77205	1	6822	6822		17.167	0.63689	1	1379900			50165	8237	33691	33704	56614	56614					0.03336450044753292
RQLLYRSWFMW	11	Unmodified	_RQLLYRSWFMW_					0	0	0		nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:31904270-32000328:+|nuORF;nc|ENSG00000198089|A8K8P3-5|SFI1	nc|ENSG00000198089|A8K8P3-4|SFI1	nc|ENSG00000198089|A8K8P3-4|SFI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.6078491210938	3	529.274734	1584.80237	0.60484	0.00032013	-3.761	-0.0019906	-3.1562	-0.0016705	529.2726734817443	75.667	0.94073	75.8	75.355	76.295	0.13325					87	26	5	0	0	0	0.79224	1	7059	7059		12.957	1.0251	1	827280			50166	8237	33691	33704	56615	56615					0.03336450044753292
RQLMGVYS	8	Unmodified	_RQLMGVYS_					0	0	0			REV__ENST00000569008.2_2_2:8953421-8953460:-|nuORF	REV__ENST00000569008.2_2_2:8953421-8953460:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2464294433594	2	477.247295	952.480036	0.42784	0.00020419	-2.0067	-0.00095767	-1.5788	-0.00075348	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.88915	2	6998	6986;6998		42.474	3.6683	1	2278400	+		50167	28905	33692	33705	56616;56617	56617					0.0018955836559371164
RQLPGPPGRK	10	Unmodified	_RQLPGPPGRK_					0	0	0		ENST00000505956.5_2_3:129137104-129140253:-|nuORF	ENST00000505956.5_2_3:129137104-129140253:-|nuORF	ENST00000505956.5_2_3:129137104-129140253:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.3341674804688	2	553.333082	1104.65161	0.28517	0.0001578	-1.4807	-0.00081935	-1.1956	-0.00066155	553.3321125200671	96.704	2.3133	96.935	96.395	98.708	0.23103					137	53	4	0	0	0	0.86763	1	10142	10142		26.693	4.1133	1	3367100			50168	12934	33693	33706	56618	56618					0.10347051448297861
RQLPLAEA	8	Unmodified	_RQLPLAEA_					0	0	0			REV__nc|ENSG00000091409|P23229-4|ITGA6	REV__nc|ENSG00000091409|P23229-4|ITGA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.26031494140625	2	449.261259	896.507966	-1.2373	-0.00055589	-0.66295	-0.00029784	-1.9003	-0.00085373	449.2607756731413	72.678	0.71947	72.758	72.438	73.158	0.080032					44	25	2	0	0	0	0.85277	1	6649	6649		25.45	1.2474	1	208410	+		50169	17011	33694	33707	56619	56619					0.05557204617332445
RQLRGRVQ	8	Unmodified	_RQLRGRVQ_					0	0	0			REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3079528808594	2	506.809774	1011.60499	-0.034451	-1.746E-05	0.3408	0.00017272	0.30635	0.00015526	506.80984286072214	44.176	0.48119	44.117	43.838	44.319	-0.058262					16	11	2	0	0	0	0.4196	1	3083	3083		17.365	9.6747	1	218610	+		50170	19963	33695	33708	56620	56620					0.0996561161698537
RQLRRRWFHHF	11	Unmodified	_RQLRRRWFHHF_					0	0	0		ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.80029296875	3	546.971148	1637.89161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.695	1	62.718	62.218	63.218	0.022984								0	0	0	0.56276	1	5470	5470		3.2113	0	1				50171	7264	33696	33709	56621	56621					0.0981846583913466
RQLSPAPGTP	10	Unmodified	_RQLSPAPGTP_					0	0	0		ENST00000322313.8_1_2:128458821-128459556:-|nuORF	ENST00000322313.8_1_2:128458821-128459556:-|nuORF	ENST00000322313.8_1_2:128458821-128459556:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2825927734375	2	512.282723	1022.55089	1.2711	0.00065114	-3.95	-0.0020235	-2.6789	-0.0013724	512.2806294768477	86.671	3.241	86.597	85.234	88.475	-0.074005					135	75	2	0	0	0	0.57924	1	8887	8887		51.193	10.415	1	387010			50172	10045	33697	33710	56622	56622					0.0405197467475773
RQLSRLSELD	10	Unmodified	_RQLSRLSELD_					0	0	0			REV__nc|ENSG00000177663|Q96F46-2|IL17RA	REV__nc|ENSG00000177663|Q96F46-2|IL17RA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	608.8375244140625	2	608.835851	1215.65715	1.1133	0.00067784	1.6313	0.00099319	2.7446	0.001671	608.836684936877	110.21	0.79676	110.33	110.13	110.93	0.11658					62	26	4	0	0	0	0.88541	1	11851	11851		11.511	1.2458	1	3625100	+		50173	22222	33698	33711	56623	56623					0.05794685449427561
RQLSVVEYI	9	Unmodified	_RQLSVVEYI_					0	0	0			REV__ENSG00000152061|ENST00000681986|RABGAP1L	REV__ENSG00000152061|ENST00000681986|RABGAP1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8130493164062	2	553.813856	1105.61316	1.609	0.00089111	-1.8587	-0.0010293	-0.24962	-0.00013824	553.8127492641156	27.044	0.65302	26.703	26.414	27.067	-0.34035					37	14	3	0	0	0	0.7932	1	1570	1570		21.96	1.9631	1	354900	+		50174	20282	33699	33712	56624	56624					0.06457701023077789
RQLWIELAPL	10	Unmodified	_RQLWIELAPL_					0	0	0		ENSG00000261609|ENST00000648994|GAN	ENSG00000261609|ENST00000648994|GAN	ENSG00000261609|ENST00000648994|GAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8689575195312	2	619.866423	1237.71829	0.62565	0.00038782	4.2643	0.0026433	4.8899	0.0030311	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.86218	1	10086	10086		32.812	0	1	4779100			50175	8927	33700	33713	56625	56625					0.1089424221952413
RQMLRLGAFC	10	Carbamidomethyl (C)	_RQMLRLGAFC(Carbamidomethyl (C))_	RQMLRLGAFC(1)		RQMLRLGAFC(44)		0	1	0			REV__ENST00000559003.5_1_15:45544130-45545988:-|nuORF	REV__ENST00000559003.5_1_15:45544130-45545988:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3277587890625	2	626.326085	1250.63762	-0.15906	-9.9625E-05	2.7029	0.0016929	2.5438	0.0015933	626.3277543404057	53.246	0.94266	53.242	52.744	53.687	-0.0033035					65	25	3	0	0	0	0.71042	1	4649	4649		44.117	11.304	1	196380	+		50176	28743	33701	33714	56626	56626	349				0.02232314633306487
RQMLRQQEDA	10	Oxidation (M)	_RQM(Oxidation (M))LRQQEDA_		RQM(1)LRQQEDA		RQM(56)LRQQEDA	0	0	1			REV__ENSG00000116017|ENST00000263620|ARID3A	REV__ENSG00000116017|ENST00000263620|ARID3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.8106079101562	2	645.814593	1289.61463	1.0677	0.00068953	-4.387	-0.0028332	-3.3193	-0.0021436	645.811490367663	25.892	0.38939	25.916	25.783	26.173	0.024021					37	17	3	0	0	0	0.49268	1	954	954		56.434	17.181	1	116810	+		50177	18171	33702	33715	56627	56627		264			-0.018590329504604597
RQNSRFAD	8	Unmodified	_RQNSRFAD_					0	0	0		ENSG00000136492|ENST00000259008|BRIP1;nc|ENSG00000136492|Q9BX63-2|BRIP1;chr17:61781005-61784270|59|22.54|0.91|4.64|-|1|BRIP1,BRIP1|1	ENSG00000136492|ENST00000259008|BRIP1	ENSG00000136492|ENST00000259008|BRIP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.24462890625	2	497.246672	992.478791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.513	1	40.469	39.969	40.969	-0.043694								0	0	0	0.29452	1	2983	2983		33.516	0	1				50178	4115	33703	33716	56628	56628					-0.01774939678955434
RQPAAGGR	8	Unmodified	_RQPAAGGR_					0	0	0		ENST00000361658.6_1_17:19770872-19771034:-|nuORF	ENST00000361658.6_1_17:19770872-19771034:-|nuORF	ENST00000361658.6_1_17:19770872-19771034:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7286071777344	2	406.727918	811.441283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.984	1	76.03	75.53	76.53	0.046448								0	0	0	0.29755	1	7412	7412		24.203	0	1				50179	10485	33704	33717	56629	56629					0.028020138460874477
RQPDGCRRPTQ	11	Unmodified	_RQPDGCRRPTQ_					0	0	0			REV__ENST00000309575.4_1_3:142839097-142839319:+|nuORF	REV__ENST00000309575.4_1_3:142839097-142839319:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26348876953125	3	438.55456	1312.64185	0.29146	0.00012782	2.3442	0.001028	2.6356	0.0011559	438.8890471193972	34.938	0.1888	35.15	35.017	35.206	0.21185					6	4	2	0	0	0	0.17334	1	2617	2617		27.644	0	1	64042	+		50180	24870	33705	33718	56630	56630					-0.0019650461943001574
RQPFTSVP	8	Unmodified	_RQPFTSVP_					0	0	0			REV__nc|ENSG00000174038|Q5VYM1-3|SPATA31G1	REV__nc|ENSG00000174038|Q5VYM1-3|SPATA31G1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2527770996094	2	466.253434	930.492316	-0.11965	-5.5788E-05	0.6468	0.00030157	0.52714	0.00024578	466.2536537931843	61.171	1.1863	61.159	60.038	61.224	-0.012203					48	38	2	0	0	0	0.86288	1	5648	5648		26.796	0	1	281870	+		50181	21971	33706	33719	56631	56631					0.024289181002927762
RQPKRRRRNRR	11	Unmodified	_RQPKRRRRNRR_					0	0	0			REV__chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS;REV__nc|ENSG00000087460|Q5JWF2-2|GNAS	REV__nc|ENSG00000087460|Q5JWF2-2|GNAS	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.7799682617188	3	526.996468	1577.96757	-0.63698	-0.00033569	-4.4045	-0.0023212	-5.0415	-0.0026569	527.3280500775481	62.919	0.1083	62.942	62.887	62.996	0.022984					6	4	2	0	0	0	0.18159	1	5487	5487		17.167	16.019	1	49407	+		50182	15781;29717	33707	33720	56632	56632					0.20170862739291806
RQPLAILA	8	Unmodified	_RQPLAILA_					0	0	0		ENST00000476438.1_1_16:632096-633032:+|nuORF	ENST00000476438.1_1_16:632096-633032:+|nuORF	ENST00000476438.1_1_16:632096-633032:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.2837219238281	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.743	1	40.697	40.197	41.197	-0.045467								0	0	0	0.30004	1	2604	2604		21.702	2.3424	1				50183	12338	33708	33721	56633	56633					0.10438385376653514
RQPPLSPHN	9	Unmodified	_RQPPLSPHN_					0	0	0			REV__nc|ENSG00000211898|P01880-1|IGHD	REV__nc|ENSG00000211898|P01880-1|IGHD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3031005859375	2	523.280515	1044.54648	2.4481	0.0012811	0.49591	0.0002595	2.944	0.0015406	523.2805696914961	100.89	0.40695	101.24	101.02	101.42	0.34591					13	9	2	0	0	0	0.20789	1	12262	12262		24.519	10.382	1	145680	+		50184	30193	33709	33722	56634	56634					0.02598510251868902
RQPPTRVRP	9	Unmodified	_RQPPTRVRP_					0	0	0		ENST00000531444.1_1_11:23427242-23427602:+|nuORF	ENST00000531444.1_1_11:23427242-23427602:+|nuORF	ENST00000531444.1_1_11:23427242-23427602:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8302001953125	2	553.830706	1105.64686	-0.60953	-0.00033757	-0.31573	-0.00017486	-0.92525	-0.00051243	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.78983	1	8983	8983		27.882	1.8189	1	3935500			50185	13360	33710	33723	56635	56635					0.09826167305504896
RQPPTVRSTLL	11	Unmodified	_RQPPTVRSTLL_					0	0	0			REV__ENST00000397086.6_2_16:2303455-2303809:-|nuORF	REV__ENST00000397086.6_2_16:2303455-2303809:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3748779296875	2	634.377686	1266.74082	2.1873	0.0013876	-2.6623	-0.0016889	-0.47502	-0.00030134	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.66929	1	13335	13335		36.447	0.82846	1	6886400	+		50186	26157	33711	33724	56636	56636					0.11811841617145546
RQPQPVHLLPL	11	Unmodified	_RQPQPVHLLPL_					0	0	0		ENSG00000213398|ENST00000264005|LCAT	ENSG00000213398|ENST00000264005|LCAT	ENSG00000213398|ENST00000264005|LCAT	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	649.3919067382812	2	649.390596	1296.76664	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.47	1	110.47	109.97	110.97	0								0	0	0	0.56276	1	11478	11478		20.947	0	1				50187	8588	33712	33725	56637	56637					0.13012735859410896
RQPRPKRIKQK	11	Unmodified	_RQPRPKRIKQK_					0	0	0			REV__nc|ENSG00000147548|Q9BZ95-4|NSD3	REV__nc|ENSG00000147548|Q9BZ95-4|NSD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.97369384765625	3	478.975788	1433.90553	0.1614	7.7307E-05	-2.9471	-0.0014116	-2.7857	-0.0013343	478.974258997061	46.621	1.762	46.607	45.625	47.387	-0.013821					99	45	3	0	0	0	0.81021	1	3734	3734		9.2118	0.80454	1	179760	+		50188	20075	33713	33726	56638	56638					0.20593698547577333
RQPRPKRIKQK	11	Unmodified	_RQPRPKRIKQK_					0	0	0			REV__nc|ENSG00000147548|Q9BZ95-4|NSD3	REV__nc|ENSG00000147548|Q9BZ95-4|NSD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9756164550781	3	478.975788	1433.90553	-0.41434	-0.00019846	-1.9974	-0.00095669	-2.4117	-0.0011551	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.8498	1	4191	4191		6.001	0	1	341610	+		50189	20075	33713	33726	56639	56639					0.20593698547577333
RQPRPTRVP	9	Unmodified	_RQPRPTRVP_					0	0	0			REV__ENST00000360772.7_2_3:123401121-123411584:-|nuORF	REV__ENST00000360772.7_2_3:123401121-123411584:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.830322265625	2	553.830706	1105.64686	1.2868	0.00071265	-1.764	-0.00097697	-0.47725	-0.00026432	553.8295040340431	102.46	0.73058	102.5	102.18	102.91	0.043198					39	17	3	0	0	0	0.78983	1	11079	11079		27.882	2.3082	1	576050	+		50190	25485	33714	33727	56640	56640					0.09826167305527633
RQPRRLSA	8	Unmodified	_RQPRRLSA_					0	0	0			REV__ENST00000505306.5_1_17:48167246-48167522:+|nuORF	REV__ENST00000505306.5_1_17:48167246-48167522:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.297607421875	2	492.296499	982.578445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.27	1	65.235	64.735	65.735	-0.034798								0	0	0	0.29264	1	6259	6259		29.15	2.4566	1		+		50191	27878	33715	33728	56641	56641					0.08645922725656874
RQPRRLSA	8	Unmodified	_RQPRRLSA_					0	0	0			REV__ENST00000505306.5_1_17:48167246-48167522:+|nuORF	REV__ENST00000505306.5_1_17:48167246-48167522:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.298583984375	2	492.296499	982.578445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.772	1	67.831	67.331	68.331	0.059288								0	0	0	0.29816	1	6053	6053		38.806	1.647	1		+		50192	27878	33715	33728	56642	56642					0.08645922725656874
RQPRRRQH	8	Unmodified	_RQPRRRQH_					0	0	0		nc|ENSG00000196810|C0HM98|CTBP1-DT;ENST00000578730.1_1_4:1244361-1244919:+|nuORF	nc|ENSG00000196810|C0HM98|CTBP1-DT	nc|ENSG00000196810|C0HM98|CTBP1-DT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3301391601562	2	567.329196	1132.64384	1.203	0.00068247	1.2918	0.0007329	2.4948	0.0014154	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.85277	1	10801	10801		25.45	0.93098	1	4990000			50193	14080	33716	33729	56643	56643					0.08282336971365112
RQPSHVAL	8	Unmodified	_RQPSHVAL_					0	0	0			REV__ENSG00000225614|ENST00000565624|ZNF469	REV__ENSG00000225614|ENST00000565624|ZNF469	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	454.2593078613281	2	454.259051	906.503549	-0.84049	-0.0003818	-0.11579	-5.26E-05	-0.95628	-0.0004344	454.2589968690247	61.976	0.3824	61.992	61.794	62.176	0.015724					16	12	2	0	0	0	0.87922	1	5399	5399		31.955	0	1	154210	+		50194	23739	33717	33730	56644	56644					0.046557401944255616
RQPSHVAL	8	Unmodified	_RQPSHVAL_					0	0	0			REV__ENSG00000225614|ENST00000565624|ZNF469	REV__ENSG00000225614|ENST00000565624|ZNF469	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	454.259051	906.503549	-1.2462	-0.0005661	0.62317	0.00028308	-0.62305	-0.00028302	454.25929926026225	61.872	0.41074	61.979	61.792	62.203	0.10743	-0.0064097	0.00029809	NaN	31.955	19	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103090	+		50195	23739	33717	33730							0.046557401944255616
RQPSHVAL	8	Unmodified	_RQPSHVAL_					0	0	0			REV__ENSG00000225614|ENST00000565624|ZNF469	REV__ENSG00000225614|ENST00000565624|ZNF469	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	454.259051	906.503549	-0.84049	-0.0003818	-0.11579	-5.26E-05	-0.95628	-0.0004344	454.2589968690247	61.976	0.3824	61.992	61.794	62.176	0.015724	0.0064097	-0.00037327	NaN	31.955	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	154210	+		50196	23739	33717	33730							0.046557401944255616
RQQAAKKVP	9	Unmodified	_RQQAAKKVP_					0	0	0			REV__ENST00000524227.5_1_8:41525962-41555361:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1	REV__nc|ENSG00000029534|P16157-14|ANK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3164672851562	2	513.314358	1024.61416	0.017852	9.1639E-06	4.224	0.0021683	4.2419	0.0021774	513.3163616040292	43.268	1.3862	43.218	42.749	44.135	-0.050312					74	33	3	0	0	0	0.77546	1	2940	2940		31.955	0	1	383900	+		50197	29680;29681;28156	33718	33731	56645	56645					0.10283960182664487
RQQERQLKRIY	11	Unmodified	_RQQERQLKRIY_					0	0	0			REV__nc|ENSG00000187098|O75030-11|MITF	REV__nc|ENSG00000187098|O75030-11|MITF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3100280761719	3	506.626824	1516.85864	-1.6124	-0.00081691	1.1166	0.00056568	-0.49589	-0.00025123	506.6273378477409	39.384	0.51892	39.384	39.065	39.584	0					21	12	2	0	0	0	0.17911	1	2500	2500		24.232	15.433	1	70473	+		50198	22903	33719	33732	56646	56646					0.12088794205806153
RQQERQLKRIY	11	Unmodified	_RQQERQLKRIY_					0	0	0			REV__nc|ENSG00000187098|O75030-11|MITF	REV__nc|ENSG00000187098|O75030-11|MITF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	506.626824	1516.85864	0.2536	0.00012848	0.25187	0.0001276	0.50546	0.00025608	506.961758270923	39.207	0.37332	39.295	38.991	39.365	0.088375	-0.006459	-0.00057645	NaN	24.232	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64382	+		50199	22903	33719	33732							0.12088794205806153
RQQERQLKRIY	11	Unmodified	_RQQERQLKRIY_					0	0	0			REV__nc|ENSG00000187098|O75030-11|MITF	REV__nc|ENSG00000187098|O75030-11|MITF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	506.626824	1516.85864	0.14005	7.0951E-05	-1.0881	-0.00055124	-0.94802	-0.00048029	506.96056136599645	39.277	0.33727	39.225	39.039	39.376	-0.052731	-0.076667	-0.002613	NaN	24.232	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58818	+		50200	22903	33719	33732							0.12088794205806153
RQQLKIINDLL	11	Unmodified	_RQQLKIINDLL_					0	0	0		ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2;nc|ENSG00000138346|P51530-3|DNA2	ENSG00000138346|ENST00000358410|DNA2	ENSG00000138346|ENST00000358410|DNA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9436950683594	3	451.945271	1352.81398	-0.094243	-4.2593E-05	-4.1136	-0.0018591	-4.2078	-0.0019017	451.9433078192179	55.499	2.0176	55.489	54.191	56.208	-0.010136					136	62	4	0	0	0	0.77803	1	4931	4931		15.921	1.8346	1	381010			50201	4288	33720	33733	56647	56647					0.15168970339777843
RQQPMKKQIL	10	Unmodified	_RQQPMKKQIL_					0	0	0		ENST00000330292.4_17:80207889-80208285:+|nuORF	ENST00000330292.4_17:80207889-80208285:+|nuORF	ENST00000330292.4_17:80207889-80208285:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.87841796875	2	635.376632	1268.73871	2.1914	0.0013923	3.044	0.0019341	5.2354	0.0033264	635.3782760987792	110.22	1.1586	110.28	110.14	111.29	0.054062					53	39	2	0	0	0	0.37624	1	13447	13447		6.7355	1.8298	1	1113000			50202	10109	33721	33734	56648	56648					0.1150908960767083
RQQREQVC	8	Unmodified	_RQQREQVC_					0	0	0		ENST00000596902.1_1_19:44005819-44008744:-|nuORF	ENST00000596902.1_1_19:44005819-44008744:-|nuORF	ENST00000596902.1_1_19:44005819-44008744:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.2592163085938	2	523.761632	1045.50871	-0.042751	-2.2391E-05	-1.0873	-0.00056951	-1.1301	-0.0005919	523.7607727774529	60.587	0.95979	60.575	60.077	61.037	-0.012203					59	22	4	0	0	0	0.90465	1	5638	5638		40.573	2.7611	1	308610			50203	14343	33722	33735	56649	56649					-0.012223240052662732
RQRAKKYTL	9	Unmodified	_RQRAKKYTL_					0	0	0		nc|ENSG00000166317|Q9H987-2|SYNPO2L;ENSG00000166317|ENST00000394810|SYNPO2L	nc|ENSG00000166317|Q9H987-2|SYNPO2L	nc|ENSG00000166317|Q9H987-2|SYNPO2L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.353759765625	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.77696	1	10611	10611		31.53	7.0106	1	61091000			50204	6176	33723	33736	56650	56650					0.11863607136797327
RQRAKKYTL	9	Unmodified	_RQRAKKYTL_					0	0	0		nc|ENSG00000166317|Q9H987-2|SYNPO2L;ENSG00000166317|ENST00000394810|SYNPO2L	nc|ENSG00000166317|Q9H987-2|SYNPO2L	nc|ENSG00000166317|Q9H987-2|SYNPO2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3531494140625	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.74721	1	12755	12755		37.159	15.199	1	3937500			50205	6176	33723	33736	56651	56651					0.11863607136797327
RQRDSRNMD	9	Unmodified	_RQRDSRNMD_					0	0	0		chr15:89582965-89584286|54|17.89|0.42|5.4|+|1|TICRR,TICRR|2	chr15:89582965-89584286|54|17.89|0.42|5.4|+|1|TICRR,TICRR|2	chr15:89582965-89584286|54|17.89|0.42|5.4|+|1|TICRR,TICRR|2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3427124023438	2	589.278177	1176.5418	2.3885	0.0014075	1.5514	0.00091421	3.9399	0.0023217	589.2787690339709	93.986	0.21454	93.927	93.801	94.016	-0.059212					6	4	2	0	0	0	0.20789	1	9976	9976		35.618	8.9254	1	18891			50206	196	33724	33737	56652	56652					-0.039407419532153654
RQREKEREL	9	Unmodified	_RQREKEREL_					0	0	0			REV__ENSG00000134186|ENST00000370025|PRPF38B	REV__ENSG00000134186|ENST00000370025|PRPF38B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	622.3462524414062	2	622.346917	1242.67928	0.8786	0.00054679	-0.76103	-0.00047363	0.11757	7.3167E-05	622.346539275879	95.975	2.7711	96.138	95.071	97.843	0.16317					131	65	3	0	0	0	0.7932	1	9814	9814		26.693	1.1189	1	486240	+		50207	19120	33725	33738	56653	56653					0.06764909917865225
RQREYGKS	8	Unmodified	_RQREYGKS_					0	0	0		ENST00000430374.5_1_2:217279626-217279842:+|nuORF	ENST00000430374.5_1_2:217279626-217279842:+|nuORF	ENST00000430374.5_1_2:217279626-217279842:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2702026367188	2	512.270147	1022.52574	-0.6527	-0.00033436	2.4075	0.0012333	1.7548	0.00089891	512.2710508080586	107.11	1.0677	107.11	106.66	107.73	0					49	24	3	0	0	0	0.86288	1	11129	11129		26.796	2.5934	1	154400			50208	11632	33726	33739	56654	56654					0.01537919872191651
RQRHKKPS	8	Unmodified	_RQRHKKPS_					0	0	0		L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|75|3|sense	L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|75|3|sense	L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|75|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	518.8103637695312	2	518.809774	1035.60499	-0.044892	-2.329E-05	1.2774	0.00066273	1.2325	0.00063944	518.8103326837978	99.065	1.4827	99.115	98.705	100.19	0.049828					66	34	3	0	0	0	0.87064	1	10501	10501		29.15	0	1	1074200			50209	14676	33727	33740	56655	56655					0.08861611616976006
RQRHKKPS	8	Unmodified	_RQRHKKPS_					0	0	0		L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|75|3|sense	L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|75|3|sense	L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|75|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	518.810302734375	2	518.809774	1035.60499	-1.5537	-0.00080609	2.6843	0.0013926	1.1306	0.00058655	518.8109964843734	98.606	1.5351	98.802	98.332	99.867	0.19585					64	35	3	0	0	0	0.88185	1	10203	10203		32.812	7.2384	1	905260			50210	14676	33727	33740	56656	56656					0.08861611616976006
RQRHVRLHQ	9	Unmodified	_RQRHVRLHQ_					0	0	0			REV__ENSG00000168813|ENST00000355898|ZNF507	REV__ENSG00000168813|ENST00000355898|ZNF507	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	615.3580322265625	2	615.357954	1228.70135	-0.11045	-6.7968E-05	-0.63419	-0.00039025	-0.74464	-0.00045822	615.3576279299549	104.87	2.2143	104.87	104.31	106.53	0					144	52	4	0	0	0	0.78058	1	10838	10838		30.504	1.3336	1	1478900	+		50211	21523	33728	33741	56657	56657					0.09615179176921629
RQRHVRLHQ	9	Unmodified	_RQRHVRLHQ_					0	0	0			REV__ENSG00000168813|ENST00000355898|ZNF507	REV__ENSG00000168813|ENST00000355898|ZNF507	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	615.3594360351562	2	615.357954	1228.70135	0.40765	0.00025085	-1.2735	-0.00078365	-0.86583	-0.00053279	615.3571997592003	104.58	1.8595	104.62	104.13	105.99	0.039864					128	44	4	0	0	0	0.78058	1	11355	11355		30.504	3.7075	1	2014000	+		50212	21523	33728	33741	56658	56658					0.09615179176921629
RQRKLVSPPTG	11	Unmodified	_RQRKLVSPPTG_					0	0	0			REV__nc|ENSG00000101057|P10244-2|MYBL2	REV__nc|ENSG00000101057|P10244-2|MYBL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8698120117188	2	619.870028	1237.7255	-0.18236	-0.00011304	-0.59862	-0.00037106	-0.78097	-0.0004841	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.7144	1	9737	9737		29.17	4.6509	1	2627900	+		50213	17238	33729	33742	56659	56659					0.11614974819917734
RQRKLVSPPTG	11	Unmodified	_RQRKLVSPPTG_					0	0	0			REV__nc|ENSG00000101057|P10244-2|MYBL2	REV__nc|ENSG00000101057|P10244-2|MYBL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.869873046875	2	619.870028	1237.7255	2.0624	0.0012784	-3.3055	-0.002049	-1.2431	-0.00077056	619.8678492982955	94.196	2.767	94.137	92.294	95.061	-0.059212					208	65	4	0	0	0	0.60058	1	10044	10044		44.377	12.847	1	2061200	+		50214	17238	33729	33742	56660	56660					0.11614974819917734
RQRKLVSPPTG	11	Unmodified	_RQRKLVSPPTG_					0	0	0			REV__nc|ENSG00000101057|P10244-2|MYBL2	REV__nc|ENSG00000101057|P10244-2|MYBL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8695068359375	2	619.870028	1237.7255	0.87762	0.00054401	-1.8204	-0.0011284	-0.94278	-0.0005844	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.65746	1	9931	9931		37.812	1.3648	1	6574700	+		50215	17238	33729	33742	56661	56661					0.11614974819917734
RQRKLVSPPTG	11	Unmodified	_RQRKLVSPPTG_					0	0	0			REV__nc|ENSG00000101057|P10244-2|MYBL2	REV__nc|ENSG00000101057|P10244-2|MYBL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8694458007812	2	619.870028	1237.7255	-1.2246	-0.00075908	0.04402	2.7286E-05	-1.1806	-0.0007318	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.70737	1	9615	9615		30.318	2.2362	1	3118800	+		50216	17238	33729	33742	56662	56662					0.11614974819917734
RQRKLVSPPTG	11	Unmodified	_RQRKLVSPPTG_					0	0	0			REV__nc|ENSG00000101057|P10244-2|MYBL2	REV__nc|ENSG00000101057|P10244-2|MYBL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8693237304688	2	619.870028	1237.7255	-1.2246	-0.00075909	0.27155	0.00016833	-0.95304	-0.00059076	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.66929	1	9743	9743		36.447	3.6962	1	6224400	+		50217	17238	33729	33742	56663	56663					0.11614974819917734
RQRKLVSPPTG	11	Unmodified	_RQRKLVSPPTG_					0	0	0			REV__nc|ENSG00000101057|P10244-2|MYBL2	REV__nc|ENSG00000101057|P10244-2|MYBL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.869384765625	2	619.870028	1237.7255	1.7162	0.0010638	-2.4227	-0.0015017	-0.70652	-0.00043795	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.73893	1	11518	11518		24.519	0.31644	1	4719500	+		50218	17238	33729	33742	56664	56664					0.11614974819917734
RQRKLVSPPTG	11	Unmodified	_RQRKLVSPPTG_					0	0	0			REV__nc|ENSG00000101057|P10244-2|MYBL2	REV__nc|ENSG00000101057|P10244-2|MYBL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8690185546875	2	619.870028	1237.7255	0.5439	0.00033715	-1.617	-0.0010023	-1.0731	-0.00066519	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.69995	1	11362	11362		31.53	4.8369	1	1280900	+		50219	17238	33729	33742	56665	56665					0.11614974819917734
RQRKLVSPPTG	11	Unmodified	_RQRKLVSPPTG_					0	0	0			REV__nc|ENSG00000101057|P10244-2|MYBL2	REV__nc|ENSG00000101057|P10244-2|MYBL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8692626953125	2	619.870028	1237.7255	1.2588	0.00078029	-1.8553	-0.0011501	-0.59653	-0.00036977	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.67778	1	11515	11515		35.152	0	1	4742500	+		50220	17238	33729	33742	56666	56666					0.11614974819917734
RQRKPKRP	8	Unmodified	_RQRKPKRP_					0	0	0			REV__ENSG00000198064|ENST00000697092|NPIPB13	REV__ENSG00000198064|ENST00000697092|NPIPB13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	533.3395385742188	2	533.341241	1064.66793	0.82147	0.00043812	-2.7034	-0.0014418	-1.8819	-0.0010037	533.3397014288719	99.113	2.1038	99.27	98.724	100.83	0.15659					144	48	4	0	0	0	0.86288	1	10389	10389		26.796	0	1	2216600	+		50221	23295	33730	33743	56667	56667					0.1381817740502811
RQRKTKEKERL	11	Unmodified	_RQRKTKEKERL_					0	0	0			REV__ENST00000525556.1_1_8:61878844-61880304:-|nuORF	REV__ENST00000525556.1_1_8:61878844-61880304:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.6331787109375	3	491.298707	1470.87429	-0.76352	-0.00037512	1.8185	0.00089344	1.055	0.00051832	491.2995386028914	111.52	0.67294	111.52	111.3	111.98	0					49	24	3	0	0	0	0.84494	1	11619	11619		6.3209	0	1	27267	+		50222	28186	33731	33744	56668	56668					0.15769080722816398
RQRKTKEKERL	11	Unmodified	_RQRKTKEKERL_					0	0	0			REV__ENST00000525556.1_1_8:61878844-61880304:-|nuORF	REV__ENST00000525556.1_1_8:61878844-61880304:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2995910644531	3	491.298707	1470.87429	2.8436	0.001397	-2.0394	-0.0010019	0.80419	0.0003951	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.80164	1	13037	13037		10.998	4.3386	1	3274400	+		50223	28186	33731	33744	56669	56669					0.15769080722816398
RQRLIGRQRLR	11	Unmodified	_RQRLIGRQRLR_					0	0	0			REV__nc|ENSG00000004777|O14559-10|ARHGAP33	REV__nc|ENSG00000004777|O14559-10|ARHGAP33	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2854309082031	3	484.64292	1450.90693	-0.81422	-0.00039461	2.0592	0.00099799	1.245	0.00060338	484.9780456695392	52.555	0.62731	52.596	52.186	52.813	0.040592					28	18	2	0	0	0	0.18258	1	4265	4265		12.957	7.5446	1	186380	+		50224	16062	33732	33745	56670	56670					0.199513326363558
RQRLINQV	8	Unmodified	_RQRLINQV_					0	0	0			REV__nc|ENSG00000152904|O95749-2|GGPS1	REV__nc|ENSG00000152904|O95749-2|GGPS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8094482421875	2	513.811982	1025.60941	-1.4445	-0.00074222	-4.4488	-0.0022859	-5.8934	-0.0030281	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.84341	1	3660	3660		24.203	1.1603	1	1675700	+		50225	20320	33733	33746	56671	56671					0.09763076039894258
RQRPKCVC	8	Unmodified	_RQRPKCVC_					0	0	0		ENST00000535164.5_1_16:19612936-19627472:+|nuORF	ENST00000535164.5_1_16:19612936-19627472:+|nuORF	ENST00000535164.5_1_16:19612936-19627472:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.25537109375	2	495.260213	988.505874	-1.7096	-0.00084669	-0.73719	-0.0003651	-2.4468	-0.0012118	495.25992726495855	40.741	2.1466	41.33	40.797	42.943	0.58915					138	58	4	0	0	0	0.88915	1	3573	3573		35.201	1.6851	1	7011700			50226	13420	33734	33747	56672	56672					0.011161293362192737
RQRPLSILPQ	10	Unmodified	_RQRPLSILPQ_					0	0	0			REV__chr1:190104313-190160668|17|17.59|0.07|7.94|-|1|None,BRINP3|1	REV__chr1:190104313-190160668|17|17.59|0.07|7.94|-|1|None,BRINP3|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.24700927734375	3	403.247173	1206.71969	-1.9293	-0.00077799	1.1746	0.00047366	-0.7547	-0.00030433	403.24758115209465	104.53	3.0767	104.62	103.79	106.87	0.093857					248	75	5	0	0	0	0.84816	1	11074	11074		12.433	0	1	9819800	+		50227	15434	33735	33748	56673	56673					0.12459876308275852
RQRPRRKRKK	10	Unmodified	_RQRPRRKRKK_					0	0	0		ENST00000354992.6_1_22:34316098-34316365:-|nuORF	ENST00000354992.6_1_22:34316098-34316365:-|nuORF	ENST00000354992.6_1_22:34316098-34316365:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.31146240234375	3	470.311393	1407.91235	0.052453	2.4669E-05	-0.23181	-0.00010902	-0.17936	-8.4354E-05	470.31115274102893	16.418	0.33107	16.478	16.38	16.711	0.059269					27	13	3	0	0	0	0.888	1	144	144		11.097	1.885	1	207220			50228	10345	33736	33749	56674	56674					0.22471056218796548
RQRQPLRRRRL	11	Unmodified	_RQRQPLRRRRL_					0	0	0			REV__ENST00000331569.5_1_8:37554703-37555105:+|nuORF	REV__ENST00000331569.5_1_8:37554703-37555105:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.3260498046875	3	512.325702	1533.95528	-0.46223	-0.00023681	0.47439	0.00024304	0.012157	6.2284E-06	512.3256729612502	17	0.37227	17.046	16.869	17.241	0.0457					28	14	3	0	0	0	0.88916	1	214	214		3.4087	2.0868	1	146800	+		50229	25128	33737	33750	56675	56675					0.20965826276233201
RQRQPLRRRRL	11	Unmodified	_RQRQPLRRRRL_					0	0	0			REV__ENST00000331569.5_1_8:37554703-37555105:+|nuORF	REV__ENST00000331569.5_1_8:37554703-37555105:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.3258666992188	3	512.325702	1533.95528	0.81057	0.00041528	-0.85873	-0.00043995	-0.048159	-2.4673E-05	512.3250543907768	17.022	0.2883	16.998	16.847	17.136	-0.024035					24	11	3	0	0	0	0.84494	1	209	209		6.3209	0.31984	1	270910	+		50230	25128	33737	33750	56676	56676					0.20965826276233201
RQRQRRRRRRV	11	Unmodified	_RQRQRRRRRRV_					0	0	0			REV__ENST00000560608.5_1_15:58971480-59041769:-|nuORF	REV__ENST00000560608.5_1_15:58971480-59041769:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.7484130859375	3	541.675617	1622.00502	0.90552	0.0004905	-4.4258	-0.0023973	-3.5202	-0.0019068	541.6733914121671	15.777	0.14795	15.753	15.651	15.799	-0.024035					6	4	2	0	0	0	0.1838	1	77	77		6.001	4.4781	1	41063	+		50231	28735	33738	33751	56677	56677					0.21889954004882384
RQRQVLSTVL	10	Unmodified	_RQRQVLSTVL_					0	0	0		nc|ENSG00000135835|Q5VZ46-2|KIAA1614;ENSG00000135835|ENST00000367588|KIAA1614	nc|ENSG00000135835|Q5VZ46-2|KIAA1614	nc|ENSG00000135835|Q5VZ46-2|KIAA1614	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.9149169921875	3	400.578811	1198.7146	5.5428	0.0022203	-1.2854	-0.00051489	4.2574	0.0017054	400.57819432887953	111.82	0.52379	111.85	111.7	112.22	0.032707					48	18	4	0	0	0	0.85441	1	13587	13587		20.837	3.6704	1	3019100			50232	4056	33739	33752	56678	56678					0.12319572445653648
RQRRAAPFPW	10	Unmodified	_RQRRAAPFPW_					0	0	0		ENST00000566525.5_1_16:770611-770875:+|nuORF	ENST00000566525.5_1_16:770611-770875:+|nuORF	ENST00000566525.5_1_16:770611-770875:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.365234375	2	642.857255	1283.69996	7.1593	0.0046024	2.7295	0.0017547	9.8889	0.0063571	642.8599606698372	113.79	0.62252	113.79	113.54	114.16	0.0011978					27	24	2	0	0	0	0.37624	1	13742	13742		35.618	7.736	1	32282			50233	13935	33740	33753	56679	56679					0.06945545088160543
RQRREFREKRL	11	Unmodified	_RQRREFREKRL_					0	0	0		nc|ENSG00000104859|Q8N2M8-3|CLASRP;nc|ENSG00000104859|Q8N2M8-4|CLASRP;ENSG00000104859|ENST00000221455|CLASRP	nc|ENSG00000104859|Q8N2M8-3|CLASRP	nc|ENSG00000104859|Q8N2M8-3|CLASRP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.3085327148438	3	525.309718	1572.90732	3.9552	0.0020777	-0.72201	-0.00037928	3.2332	0.0016985	525.3077170758435	104.92	1.8829	105.15	104.51	106.4	0.2268					138	50	5	0	0	0	0.79945	1	12837	12837		11.455	2.2428	1	329530			50234	2156	33741	33754	56680	56680					0.14378707565538207
RQRRPNLP	8	Unmodified	_RQRRPNLP_					0	0	0		ENST00000587457.1_1_19:55741792-55741891:-|nuORF	ENST00000587457.1_1_19:55741792-55741891:-|nuORF	ENST00000587457.1_1_19:55741792-55741891:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8108520507812	2	518.809774	1035.60499	2.0617	0.0010696	-1.0619	-0.00055092	0.99976	0.00051869	518.8091991124401	100.03	1.7649	100.37	99.779	101.54	0.34591					151	44	5	0	0	0	0.92973	1	12103	12103		50.025	0.58299	1	18229000			50235	14192	33742	33755	56681	56681					0.08861611616976006
RQRRRDAMKRL	11	Unmodified	_RQRRRDAMKRL_					0	0	0			REV__ENST00000418132.7_1_17:38296747-38323177:+|nuORF	REV__ENST00000418132.7_1_17:38296747-38323177:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.9587707519531	3	495.960032	1484.85827	-0.55481	-0.00027516	-2.0582	-0.0010208	-2.613	-0.0012959	495.9589612829652	102.47	1.4778	102.51	101.59	103.07	0.043198					96	35	4	0	0	0	0.76579	1	11106	11106		18.531	5.0231	1	395240	+		50236	26453	33743	33756	56682	56682					0.13523096004928448
RQRRRRERDR	10	Unmodified	_RQRRRRERDR_					0	0	0		ENST00000452135.6_3_5:179707603-179719088:-|nuORF	ENST00000452135.6_3_5:179707603-179719088:-|nuORF	ENST00000452135.6_3_5:179707603-179719088:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2909851074219	3	495.289428	1482.84646	0.024428	1.2099E-05	4.0466	0.0020042	4.071	0.0020163	495.29144035322514	17.982	0.71194	17.36	17.147	17.859	-0.62141					34	16	3	0	0	0	0.86207	1	339	339		24.232	2.4514	1	198500			50237	11914	33744	33757	56683	56683					0.12434615305960506
RQRRTQIY	8	Unmodified	_RQRRTQIY_					0	0	0			REV__ENST00000380559.7_1_9:18706652-18908543:+|nuORF	REV__ENST00000380559.7_1_9:18706652-18908543:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8203735351562	2	560.820338	1119.62612	2.0312	0.0011391	-2.9645	-0.0016625	-0.93332	-0.00052343	560.8185510503406	92.547	2.8653	92.482	91.358	94.223	-0.06414					202	67	4	0	0	0	0.85277	1	9781	9781		25.45	1.2474	1	788180	+		50238	25948	33745	33758	56684	56684					0.07109576925859074
RQRVFPELQRL	11	Unmodified	_RQRVFPELQRL_					0	0	0		ENST00000218340.3_1_X:46713071-46713176:+|nuORF	ENST00000218340.3_1_X:46713071-46713176:+|nuORF	ENST00000218340.3_1_X:46713071-46713176:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2823486328125	3	481.284398	1440.83137	-0.57529	-0.00027688	-2.152	-0.0010357	-2.7273	-0.0013126	481.28331893775436	101.47	1.933	101.51	100.25	102.18	0.044815					108	45	4	0	0	0	0.78083	1	10987	10987		15.337	1.2515	1	479720			50239	9156	33746	33759	56685	56685					0.128583106654105
RQRVFPELQRL	11	Unmodified	_RQRVFPELQRL_					0	0	0		ENST00000218340.3_1_X:46713071-46713176:+|nuORF	ENST00000218340.3_1_X:46713071-46713176:+|nuORF	ENST00000218340.3_1_X:46713071-46713176:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.28289794921875	3	481.284398	1440.83137	-0.57975	-0.00027902	-0.55663	-0.0002679	-1.1364	-0.00054692	481.28359993784676	102.78	2.1606	102.82	102.1	104.26	0.04319					140	52	5	0	0	0	0.74771	1	11128	11128		22.562	4.0305	1	978410			50240	9156	33746	33759	56686	56686					0.128583106654105
RQRVFPELQRL	11	Unmodified	_RQRVFPELQRL_					0	0	0		ENST00000218340.3_1_X:46713071-46713176:+|nuORF	ENST00000218340.3_1_X:46713071-46713176:+|nuORF	ENST00000218340.3_1_X:46713071-46713176:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.282958984375	3	481.284398	1440.83137	-1.6759	-0.00080659	-1.043	-0.00050198	-2.7189	-0.0013086	481.28381060861284	101.58	1.5224	101.74	100.8	102.32	0.15505					100	37	3	0	0	0	0.74771	1	10630	10630		22.562	4.7284	1	436410			50241	9156	33746	33759	56687	56687					0.128583106654105
RQRVFPELQRL	11	Unmodified	_RQRVFPELQRL_					0	0	0		ENST00000218340.3_1_X:46713071-46713176:+|nuORF	ENST00000218340.3_1_X:46713071-46713176:+|nuORF	ENST00000218340.3_1_X:46713071-46713176:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.2828369140625	3	481.284398	1440.83137	-1.6759	-0.0008066	-0.075034	-3.6113E-05	-1.751	-0.00084271	481.2841599941505	102.78	1.5282	102.92	102.18	103.71	0.13569					101	38	5	0	0	0	0.73277	1	10787	10787		25.892	12.934	1	918230			50242	9156	33746	33759	56688	56688					0.128583106654105
RQRVPRPLE	9	Unmodified	_RQRVPRPLE_					0	0	0		ENST00000268070.8_1_15:100514484-100533361:-|nuORF	ENST00000268070.8_1_15:100514484-100533361:-|nuORF	ENST00000268070.8_1_15:100514484-100533361:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8438720703125	2	575.843813	1149.67307	-0.31832	-0.0001833	-0.17319	-9.9728E-05	-0.49151	-0.00028303	575.8434817330223	103.97	0.85896	103.97	103.68	104.54	0					49	21	4	0	0	0	0.7932	1	10679	10679		21.96	2.8564	1	337380			50243	9534	33747	33760	56689	56689					0.10422436476960684
RQRWTSWWVRY	11	Unmodified	_RQRWTSWWVRY_					0	0	0			REV__nc|ENSG00000198089|A8K8P3-4|SFI1	REV__nc|ENSG00000198089|A8K8P3-4|SFI1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	542.2879028320312	3	541.947898	1622.82186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.07	1	55.07	54.57	55.57	0								0	0	0	0.56276	1	4656	4656		5.4129	2.2016	1		+		50244	30144	33748	33761	56690	56690					0.03536542379879393
RQSAGKGL	8	Unmodified	_RQSAGKGL_					0	0	0			REV__ENST00000308110.8_1_11:65627901-65628063:+|nuORF	REV__ENST00000308110.8_1_11:65627901-65628063:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.7394104003906	2	408.737951	815.46135	0.85094	0.00034781	3.3352	0.0013632	4.1861	0.001711	408.7393373651895	37.561	2.1469	37.572	37.24	39.387	0.011173					113	49	4	0	0	0	0.89043	1	2521	2521		35.618	1.4457	1	272800	+		50245	24859	33749	33762	56691	56691					0.04623764786060747
RQSCNLVN	8	Unmodified	_RQSCNLVN_					0	0	0		ENST00000323760.10_2_5:137667311-137667470:-|nuORF	ENST00000323760.10_2_5:137667311-137667470:-|nuORF	ENST00000323760.10_2_5:137667311-137667470:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.23333740234375	2	467.232176	932.449799	0.48872	0.00022835	2.1523	0.0010056	2.6411	0.001234	467.2330448389886	69.415	1.8077	69.544	68.979	70.786	0.1291					180	87	3	0	0	0	0.88601	2	6265	6265;6298		42.396	1.618	1	9201900			50246	10054	33750	33763	56692;56693	56692					-0.019128002996012583
RQSGAIPA	8	Unmodified	_RQSGAIPA_					0	0	0			REV__ENST00000398372.2_1_2:26372115-26372244:+|nuORF	REV__ENST00000398372.2_1_2:26372115-26372244:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.226318359375	2	400.224677	798.434801	1.8836	0.00075385	2.9405	0.0011769	4.8241	0.0019307	400.22567128573456	34.872	1.5031	35.082	34.854	36.357	0.21003					89	38	3	0	0	0	0.88944	1	2625	2625		57.811	11.859	1	1257500	+		50247	26201	33751	33764	56694	56694					0.027520758947161994
RQSGLCYIL	9	Unmodified	_RQSGLCYIL_					0	0	0		ENST00000428809.5_1_21:15516217-15516304:+|nuORF	ENST00000428809.5_1_21:15516217-15516304:+|nuORF	ENST00000428809.5_1_21:15516217-15516304:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.7786254882812	2	526.781502	1051.54845	-1.1643	-0.00061331	-1.9298	-0.0010166	-3.0941	-0.0016299	526.7803385360115	62.777	0.9392	62.777	62.472	63.411	0					104	43	3	0	0	0	0.47272	1	5524	5524		53.351	5.4358	1	461120			50248	11598	33752	33765	56695	56695					0.02473802945451098
RQSGRLTL	8	Unmodified	_RQSGRLTL_					0	0	0			REV__ENSG00000243649|ENST00000425368|CFB;REV__nc|ENSG00000243649|P00751-2|CFB	REV__nc|ENSG00000243649|P00751-2|CFB	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77716064453125	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.328	1	79.271	78.771	79.771	-0.056503								0	0	0	0.2939	1	7936	7936		27.882	2.3082	1		+		50249	23840;30232	33753	33766	56696	56696					0.07307411740168845
RQSIFRNIGT	10	Unmodified	_RQSIFRNIGT_					0	0	0		nc|ENSG00000172869|Q9Y485|DMXL1;ENSG00000172869|ENST00000539542|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3328247070312	2	596.333279	1190.652	-0.57959	-0.00034563	-0.049534	-2.9539E-05	-0.62912	-0.00037517	596.3331084008277	96.35	3.5496	96.416	95.306	98.855	0.06591					255	82	4	0	0	0	0.86218	1	10151	10151		32.812	0	1	1242500			50250	6802	33754	33767	56697	56697					0.06430426377460208
RQSIFRNIGT	10	Unmodified	_RQSIFRNIGT_					0	0	0		nc|ENSG00000172869|Q9Y485|DMXL1;ENSG00000172869|ENST00000539542|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	596.3323364257812	2	596.333279	1190.652	0.85589	0.0005104	-1.5023	-0.00089585	-0.64637	-0.00038545	596.3322598839247	96.043	3.1049	96.206	95.311	98.416	0.16316					228	72	4	0	0	0	0.86587	1	9844	9844		29.17	0	1	1469100			50251	6802	33754	33767	56698	56698					0.06430426377460208
RQSLILPKTAL	11	Unmodified	_RQSLILPKTAL_					0	0	0			REV__ENST00000607982.5_2_10:6626104-6627643:+|nuORF	REV__ENST00000607982.5_2_10:6626104-6627643:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.93231201171875	3	413.930962	1238.77106	0.19564	8.098E-05	3.7972	0.0015718	3.9928	0.0016527	413.93253835270247	43.14	1.6907	43.113	41.995	43.686	-0.026768					75	40	2	0	0	0	0.73277	2	3290	3266;3290		25.892	6.8481	1	425020	+		50252	29393	33755	33768	56699;56700	56700					0.1612220028232514
RQSLILPKTAL	11	Unmodified	_RQSLILPKTAL_					0	0	0			REV__ENST00000607982.5_2_10:6626104-6627643:+|nuORF	REV__ENST00000607982.5_2_10:6626104-6627643:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.9324645996094	3	413.930962	1238.77106	0.12638	5.2312E-05	4.0621	0.0016814	4.1884	0.0017337	413.93257989675	45.178	2.8999	45.16	43.533	46.433	-0.018585					218	68	4	0	0	0	0.68431	2	3458	3458;3470		34.087	12.306	1	518900	+		50253	29393	33755	33768	56701;56702	56701					0.1612220028232514
RQSLILPKTAL	11	Unmodified	_RQSLILPKTAL_					0	0	0			REV__ENST00000607982.5_2_10:6626104-6627643:+|nuORF	REV__ENST00000607982.5_2_10:6626104-6627643:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9322509765625	3	413.930962	1238.77106	1.6433	0.00068023	2.1649	0.00089611	3.8082	0.0015763	413.9318142026393	43.114	2.2589	43.114	42.157	44.416	0.00016785					149	54	3	0	0	0	0.68431	1	3422	3422		34.087	8.0231	1	500010	+		50254	29393	33755	33768	56703	56703					0.1612220028232514
RQSLILPKTAL	11	Unmodified	_RQSLILPKTAL_					0	0	0			REV__ENST00000607982.5_2_10:6626104-6627643:+|nuORF	REV__ENST00000607982.5_2_10:6626104-6627643:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9324645996094	3	413.930962	1238.77106	0.23139	9.5777E-05	4.1873	0.0017332	4.4187	0.001829	413.9326448757643	44.768	3.3816	44.817	43.631	47.012	0.048996					183	86	4	0	0	0	0.70278	2	3256	3245;3256		31.068	9.2877	1	706670	+		50255	29393	33755	33768	56704;56705	56705					0.1612220028232514
RQSLILPKTAL	11	Unmodified	_RQSLILPKTAL_					0	0	0			REV__ENST00000607982.5_2_10:6626104-6627643:+|nuORF	REV__ENST00000607982.5_2_10:6626104-6627643:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	413.930962	1238.77106	-1.7284	-0.00071544	5.5995	0.0023178	3.8711	0.0016024	413.9331861748567	42.059	0.84296	42.757	42.456	43.299	0.69754	-0.2958	0.0011691	NaN	34.087	54	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1111600	+		50256	29393	33755	33768							0.1612220028232514
RQSLLSFS	8	Unmodified	_RQSLLSFS_					0	0	0		ENST00000476549.6_2_6:26402494-26402590:+|nuORF	ENST00000476549.6_2_6:26402494-26402590:+|nuORF	ENST00000476549.6_2_6:26402494-26402590:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	469.2591247558594	2	469.258717	936.50288	-0.28783	-0.00013506	0.62934	0.00029532	0.34151	0.00016026	469.25892183391403	25.64	0.64706	25.599	25.332	25.979	-0.04117					41	17	3	0	0	0	0.87922	1	1106	1106		31.955	0	1	153890			50257	12340	33756	33769	56706	56706					0.0320890075471425
RQSLVELLIRP	11	Unmodified	_RQSLVELLIRP_					0	0	0		nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2;chr3:172752472-172754509|52|13.17|0.58|4.5|+|ENST00000540509|ECT2,ECT2;chr3:172750857-172752150|48|10.15|0.42|4.6|+|ENST00000540509|ECT2,ECT2;ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2	nc|ENSG00000114346|Q9H8V3-2|ECT2	nc|ENSG00000114346|Q9H8V3-2|ECT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9369201660156	3	441.94175	1322.80342	-0.63553	-0.00028087	-3.7199	-0.001644	-4.3554	-0.0019248	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.7896	1	4548	4548		13.508	0.55046	1	409610			50258	396	33757	33770	56707	56707					0.15492987685320259
RQSRRLRR	8	Unmodified	_RQSRRLRR_					0	0	0		nc|ENSG00000048649|Q96T23-2|RSF1;ENSG00000048649|ENST00000308488|RSF1;nc|ENSG00000048649|Q96T23-3|RSF1	nc|ENSG00000048649|Q96T23-2|RSF1	nc|ENSG00000048649|Q96T23-2|RSF1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.3538208007812	2	564.352671	1126.69079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.06	1	114.06	113.56	114.56	0								0	0	0	0.3037	1	11768	11768		18.324	0	1				50259	976	33758	33771	56708	56708					0.13251196522514874
RQSSGLAVIA	10	Unmodified	_RQSSGLAVIA_					0	0	0		ENSG00000152578|ENST00000282499|GRIA4	ENSG00000152578|ENST00000282499|GRIA4	ENSG00000152578|ENST00000282499|GRIA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2911071777344	2	501.290548	1000.56654	1.9814	0.00099324	-1.7904	-0.00089752	0.19096	9.5726E-05	501.2894698327482	99.155	1.1501	99.518	99.094	100.24	0.36292					59	28	3	0	0	0	0.85934	1	12021	12021		35.618	0	1	1034500			50260	5184	33759	33772	56709	56709					0.06628261191804086
RQSVLQKKPK	10	Unmodified	_RQSVLQKKPK_					0	0	0		ENST00000490957.5_1_7:11013950-11101713:+|nuORF;nc|ENSG00000106443|O94880-1|PHF14;ENSG00000106443|ENST00000634607|PHF14;nc|ENSG00000106443|O94880-2|PHF14	ENST00000490957.5_1_7:11013950-11101713:+|nuORF	ENST00000490957.5_1_7:11013950-11101713:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.5893859863281	3	404.59094	1210.75099	-1.9042	-0.00077041	-2.37	-0.0009589	-4.2742	-0.0017293	404.58983696837504	39.349	1.3734	39.36	38.786	40.16	0.010708					98	36	4	0	0	0	0.86014	1	2377	2377		23.378	1.6922	1	332570			50261	2296	33760	33773	56710	56710					0.15404449342349835
RQSWQPARRLR	11	Unmodified	_RQSWQPARRLR_					0	0	0			REV__ENST00000581937.1_1_18:9678609-9679128:-|nuORF	REV__ENST00000581937.1_1_18:9678609-9679128:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2801208496094	3	485.279759	1452.81745	-1.9728	-0.00095735	0.15166	7.36E-05	-1.8211	-0.00088375	485.61482899196227	43.284	0.55537	44.057	43.787	44.343	0.77379					24	13	3	0	0	0	0.17437	1	3932	3932		25.892	2.5138	1	941830	+		50262	29054	33761	33774	56711	56711					0.10915077956951791
RQTGAQLAL	9	Unmodified	_RQTGAQLAL_					0	0	0			REV__ENST00000552233.5_1_12:53823563-53823812:+|nuORF	REV__ENST00000552233.5_1_12:53823563-53823812:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2778015136719	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.76255	1	8245	8245		35.618	2.8059	1	2070000	+		50263	28620	33762	33775	56712	56712					0.06031992020314192
RQTGKGVGPI	10	Unmodified	_RQTGKGVGPI_					0	0	0			REV__ENST00000584021.1_1_11:119291120-119291252:-|nuORF	REV__ENST00000584021.1_1_11:119291120-119291252:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.79998779296875	2	506.79854	1011.58253	0.2762	0.00013998	4.2956	0.002177	4.5718	0.002317	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.86348	1	3661	3661		31.53	2.3598	1	416790	+		50264	29075	33763	33776	56713	56713					0.0771996742871579
RQTVIKAVH	9	Unmodified	_RQTVIKAVH_					0	0	0			REV__nc|ENSG00000020256|Q9NTW7|ZFP64	REV__nc|ENSG00000020256|Q9NTW7|ZFP64	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.32421875	2	526.322183	1050.62981	0.45815	0.00024113	4.3609	0.0022953	4.8191	0.0025364	526.3243663512045	59.761	1.5451	59.877	59.01	60.555	0.1157					98	50	2	0	0	0	0.78058	1	5195	5195		30.504	8.5438	1	175310	+		50265	29677	33764	33777	56714	56714					0.10652246699669377
RQVAAASH	8	Unmodified	_RQVAAASH_					0	0	0		ENSG00000166685|ENST00000299886|COG1	ENSG00000166685|ENST00000299886|COG1	ENSG00000166685|ENST00000299886|COG1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2278137207031	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.90465	1	7226	7226		40.573	0	1	419890			50266	6220	33765	33778	56715	56715					0.015265941262214255
RQVAAASH	8	Unmodified	_RQVAAASH_					0	0	0		ENSG00000166685|ENST00000299886|COG1	ENSG00000166685|ENST00000299886|COG1	ENSG00000166685|ENST00000299886|COG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.2273254394531	2	420.227751	838.440949	0.042435	1.7832E-05	0.092754	3.8978E-05	0.13519	5.681E-05	420.2277069932212	78.969	5.8282	79.518	76.332	82.16	0.54945					273	145	3	0	0	0	0.86288	3	9096	8988;9096;9157		44.117	10.52	1	581780			50267	6220	33765	33778	56716;56717;56718	56717					0.015265941262214255
RQVAASPA	8	Unmodified	_RQVAASPA_					0	0	0		ENSG00000163781|ENST00000260810|TOPBP1	ENSG00000163781|ENST00000260810|TOPBP1	ENSG00000163781|ENST00000260810|TOPBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.2253723144531	2	400.224677	798.434801	0.19039	7.6198E-05	2.8018	0.0011213	2.9921	0.0011975	400.2256905214053	40.131	1.7936	40.212	40.004	41.798	0.081345					102	56	2	0	0	0	0.9159	1	2514	2514		44.531	5.7249	1	1154400			50268	5861	33766	33779	56719	56719					0.027520758947048307
RQVEYSFY	8	Unmodified	_RQVEYSFY_					0	0	0			REV__ENSG00000157315|ENST00000288025|TMED6	REV__ENSG00000157315|ENST00000288025|TMED6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.259521484375	2	546.261456	1090.50836	-1.5113	-0.00082559	-4.4802	-0.0024473	-5.9915	-0.0032729	546.2596201303288	59.665	1.0379	60.055	59.609	60.646	0.39077					64	26	3	0	0	0	0.41376	1	6281	6281		79.939	8.0618	1	2812900	+		50269	20539	33767	33780	56720	56720					-0.03327420453456398
RQVGLVGAAS	10	Unmodified	_RQVGLVGAAS_					0	0	0			REV__ENST00000301021.7_1_16:88928025-88928253:+|nuORF	REV__ENST00000301021.7_1_16:88928025-88928253:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2777099609375	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.8608	1	7809	7809		34.173	1.3601	1	2142700	+		50270	24760	33768	33781	56721	56721					0.060319920203255606
RQVHLVFLSD	10	Unmodified	_RQVHLVFLSD_					0	0	0			REV__nc|ENSG00000197879|O00159-2|MYO1C	REV__nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.2272033691406	3	405.227779	1212.66151	0.067074	2.718E-05	-1.6033	-0.00064969	-1.5362	-0.00062251	405.2271099047801	26.788	0.59341	26.897	26.654	27.247	0.10901					49	27	2	0	0	0	0.86802	1	1043	1043		27.047	3.6694	1	95384	+		50271	23276	33769	33782	56722	56722					0.063681946629913
RQVKPLAAS	9	Unmodified	_RQVKPLAAS_					0	0	0		ENST00000490957.5_1_7:11013950-11101713:+|nuORF;nc|ENSG00000106443|O94880-1|PHF14;ENSG00000106443|ENST00000634607|PHF14	ENST00000490957.5_1_7:11013950-11101713:+|nuORF	ENST00000490957.5_1_7:11013950-11101713:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	485.2957763671875	2	485.295633	968.576714	-1.6628	-0.00080696	1.3091	0.00063529	-0.35374	-0.00017167	485.2962302865475	102.17	1.1411	102.31	101.84	102.98	0.13569					40	27	2	0	0	0	0.7932	1	10684	10684		26.693	5.746	1	544800			50272	2296	33770	33783	56723	56723					0.09116868917044485
RQVLFPLLLP	10	Unmodified	_RQVLFPLLLP_					0	0	0		ENSG00000254122|ENST00000398594|PCDHGB7;nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	ENSG00000254122|ENST00000398594|PCDHGB7	ENSG00000254122|ENST00000398594|PCDHGB7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.3795166015625	2	598.381709	1194.74886	-0.74115	-0.00044349	0.16298	9.7525E-05	-0.57817	-0.00034597	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.85939	1	3004	3004		23.042	1.0826	1	772980			50273	8872	33771	33784	56724	56724					0.15928020604565063
RQVLTRAS	8	Unmodified	_RQVLTRAS_					0	0	0		ENST00000529652.1_1_17:80551333-80551621:+|nuORF	ENST00000529652.1_1_17:80551333-80551621:+|nuORF	ENST00000529652.1_1_17:80551333-80551621:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77734375	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.672	1	79.672	79.172	80.172	0								0	0	0	0.2939	1	7332	7332		27.882	5.9224	1				50274	13331	33772	33785	56725	56725					0.07307411740168845
RQVMKKKAVVH	11	Unmodified	_RQVMKKKAVVH_					0	0	0		ENST00000298999.7_2_10:99923151-99968013:+|nuORF	ENST00000298999.7_2_10:99923151-99968013:+|nuORF	ENST00000298999.7_2_10:99923151-99968013:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.9404602050781	3	441.939575	1322.79689	-0.30743	-0.00013586	0.76926	0.00033996	0.46183	0.0002041	441.9398544843468	56.515	1.8945	56.486	55.84	57.735	-0.02866					126	70	3	0	0	0	0.73621	1	5238	5238		25.126	2.5644	1	946810			50275	9776	33773	33786	56726	56726					0.1484077125294334
RQVMKKKAVVH	11	Unmodified	_RQVMKKKAVVH_					0	0	0		ENST00000298999.7_2_10:99923151-99968013:+|nuORF	ENST00000298999.7_2_10:99923151-99968013:+|nuORF	ENST00000298999.7_2_10:99923151-99968013:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9389343261719	3	441.939575	1322.79689	-0.63553	-0.00028087	1.2017	0.00053107	0.56615	0.00025021	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.76579	1	4608	4608		18.531	2.0012	1	409610			50276	9776	33773	33786	56727	56727					0.1484077125294334
RQVNDNKHIY	10	Unmodified	_RQVNDNKHIY_					0	0	0			REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	643.833984375	2	643.833643	1285.65273	0.15902	0.00010238	-0.89217	-0.00057441	-0.73315	-0.00047203	643.8329272134301	49.894	0.58112	50.341	50.143	50.724	0.4476					30	13	3	0	0	0	0.76096	1	4881	4881		41.427	2.1738	1	780390	+		50277	18629	33774	33787	56728	56728					0.021332210265200047
RQVQIEGETLA	11	Unmodified	_RQVQIEGETLA_					0	0	0		ENSG00000128045|ENST00000248706|RASL11B	ENSG00000128045|ENST00000248706|RASL11B	ENSG00000128045|ENST00000248706|RASL11B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.336181640625	2	622.335684	1242.65681	-0.27733	-0.0001726	1.3013	0.00080982	1.0239	0.00063722	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.54689	1	12053	12053		31.53	0	1	419280			50278	3528	33775	33788	56729	56729					0.04519265729595645
RQVTLSPP	8	Unmodified	_RQVTLSPP_					0	0	0			REV__ENSG00000099904|ENST00000334554|ZDHHC8	REV__ENSG00000099904|ENST00000334554|ZDHHC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2607421875	2	449.261259	896.507966	-0.61479	-0.0002762	-0.29302	-0.00013164	-0.90781	-0.00040784	449.26042265951196	72.866	0.64771	72.825	72.459	73.107	-0.04039					48	22	3	0	0	0	0.89962	1	7141	7141		38.806	8.3025	1	152220	+		50279	17115	33776	33789	56730	56730					0.05557204617332445
RQVTLSPP	8	Unmodified	_RQVTLSPP_					0	0	0			REV__ENSG00000099904|ENST00000334554|ZDHHC8	REV__ENSG00000099904|ENST00000334554|ZDHHC8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.26031494140625	2	449.261259	896.507966	0.057954	2.6037E-05	-1.3536	-0.00060812	-1.2956	-0.00058208	449.2605008010548	66.1	1.0485	66.652	66.2	67.248	0.5526					65	29	3	0	0	0	0.87479	1	7224	7224		30.504	0.18592	1	957500	+		50280	17115	33776	33789	56731	56731					0.05557204617332445
RQVVERSA	8	Unmodified	_RQVVERSA_					0	0	0		nc|ENSG00000189195|Q5XKL5-4|BTBD8;nc|ENSG00000189195|Q5XKL5|BTBD8	nc|ENSG00000189195|Q5XKL5-4|BTBD8	nc|ENSG00000189195|Q5XKL5-4|BTBD8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7672119140625	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.87922	1	8552	8552		31.955	0	1	547170			50281	15174	33777	33790	56732	56732					0.04590821360523023
RQVVERSA	8	Unmodified	_RQVVERSA_					0	0	0		nc|ENSG00000189195|Q5XKL5-4|BTBD8;nc|ENSG00000189195|Q5XKL5|BTBD8	nc|ENSG00000189195|Q5XKL5-4|BTBD8	nc|ENSG00000189195|Q5XKL5-4|BTBD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7674255371094	2	472.76724	943.519927	-1.568	-0.00074129	1.5546	0.00073498	-0.013349	-6.3108E-06	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.89494	1	8173	8173		37.159	3.6435	1	404330			50282	15174	33777	33790	56733	56733					0.04590821360523023
RQVVNQQDQ	9	Unmodified	_RQVVNQQDQ_					0	0	0			REV__ENST00000586020.1_1_19:4529720-4540017:-|nuORF	REV__ENST00000586020.1_1_19:4529720-4540017:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.287109375	2	557.783619	1113.55268	-0.59303	-0.00033078	3.6979	0.0020627	3.1049	0.0017319	557.7856451288519	36.163	2.1994	36.172	35.522	37.722	0.0092773					117	48	5	0	0	0	0.62081	1	2402	2402		45.952	3.0877	1	3352300	+		50283	23653	33778	33791	56734	56734					0.00044983692714595236
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	559.6436767578125	3	559.643031	1675.90726	-0.95105	-0.00053225	3.37	0.001886	2.419	0.0013538	559.6450080482697	37.406	0.73701	37.382	37.082	37.819	-0.023979					51	16	4	0	0	0	0.93527	2	2485	2455;2485		0.37141	0.37141	1	311930	+		50284	26616	33779	33792	56735;56736	56736					0.09634752356191711
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	559.6436767578125	3	559.643031	1675.90726	-0.57707	-0.00032295	3.0483	0.0017059	2.4712	0.001383	559.9790700442095	37.295	0.84157	37.242	36.961	37.802	-0.053555					49	18	4	0	0	0	0.89215	2	2539	2539;2558		3.2113	0.18535	1	339290	+		50285	26616	33779	33792	56737;56738	56737					0.09634752356191711
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	559.9799194335938	3	559.643031	1675.90726	-0.82441	-0.00046138	2.9516	0.0016519	2.1272	0.0011905	559.6446922698374	37.288	0.97337	37.299	36.928	37.901	0.011173					57	21	4	0	0	0	0.88916	2	2458	2458;2482		3.4087	3.0965	1	281950	+		50286	26616	33779	33792	56739;56740	56739					0.09634752356191711
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	559.9780883789062	3	559.643031	1675.90726	0.26953	0.00015084	2.1948	0.0012283	2.4643	0.0013792	559.6441547574325	37.39	0.84743	37.408	36.945	37.792	0.01841					63	22	4	0	0	0	0.84494	6	2134	2122;2134;2144;2155;2163;2188		6.3209	6.3209	1	628660	+		50287	26616	33779	33792	56741;56742;56743;56744;56745;56746	56742					0.09634752356191711
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	559.97705078125	3	559.643031	1675.90726	0.28767	0.00016099	2.1315	0.0011929	2.4191	0.0013539	559.9786028425922	37.18	0.81733	37.28	36.951	37.769	0.099277					53	24	3	0	0	0	0.89215	2	2133	2123;2133		3.2113	0	1	732540	+		50288	26616	33779	33792	56747;56748	56748					0.09634752356191711
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	559.6442260742188	3	559.643031	1675.90726	0.38297	0.00021433	1.9443	0.0010881	2.3273	0.0013024	559.6440596538548	37.281	0.60312	37.221	36.96	37.564	-0.060333					56	16	5	0	0	0	0.85439	3	2127	2105;2127;2145		5.6988	3.0682	1	685900	+		50289	26616	33779	33792	56749;56750;56751	56750					0.09634752356191711
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	559.6397705078125	3	559.643031	1675.90726	0.32108	0.00017969	1.8527	0.0010368	2.1737	0.0012165	559.6436234764179	38.956	0.55581	38.903	38.71	39.266	-0.052731					34	16	3	0	0	0	0.93527	1	2346	2346		0.37141	0.37141	1	180800	+		50290	26616	33779	33792	56752	56752					0.09634752356191711
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.644287109375	3	559.643031	1675.90726	1.0219	0.00057187	1.1511	0.0006442	2.1729	0.0012161	559.6437098351835	36.853	0.86442	37.135	36.809	37.674	0.28173					59	20	5	0	0	0	0.91937	1	2907	2907		1.4188	0.096825	1	1901800	+		50291	26616	33779	33792	56753	56753					0.09634752356191711
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.6442260742188	3	559.643031	1675.90726	1.2901	0.00072199	0.95367	0.00053372	2.2438	0.0012557	559.6436188345301	36.713	0.82962	37.199	36.874	37.704	0.48581					65	19	5	0	0	0	0.8498	2	2902	2902;2914		6.001	6.001	1	2012300	+		50292	26616	33779	33792	56754;56755	56754					0.09634752356191711
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	559.643031	1675.90726	0.27213	0.00015229	1.4992	0.00083902	1.7713	0.00099131	559.9784199208285	39.137	0.38524	39.148	38.915	39.3	0.010704	0.10935	-0.00016469	NaN	0.37141	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124400	+		50293	26616	33779	33792							0.09634752356191711
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	559.643031	1675.90726	0.30312	0.00016964	1.5203	0.00085081	1.8234	0.0010205	559.6436197243011	38.976	0.43375	39.064	38.786	39.22	0.088375	0.025833	-0.00012931	NaN	0.37141	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109870	+		50294	26616	33779	33792							0.09634752356191711
RQWHLRRWWRP	11	Unmodified	_RQWHLRRWWRP_					0	0	0			REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	REV__ENST00000431361.1_1_20:61432246-61432384:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	559.643031	1675.90726	0.32108	0.00017969	1.8527	0.0010368	2.1737	0.0012165	559.6436234764179	38.956	0.55581	38.903	38.71	39.266	-0.052731	-0.13518	0.00042875	NaN	0.37141	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	180800	+		50295	26616	33779	33792							0.09634752356191711
RQWKFFFNEKP	11	Unmodified	_RQWKFFFNEKP_					0	0	0			REV__ENST00000472593.1_1_3:183521690-183528368:+|nuORF	REV__ENST00000472593.1_1_3:183521690-183528368:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.6000061035156	3	509.601616	1525.78302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.71	1	117.63	117.13	118.13	-0.07531								0	0	0	0.56276	1	12632	12632		12.957	0.52465	1		+		50296	27264	33780	33793	56756	56756					0.04115817025535762
RQWVVIPP	8	Unmodified	_RQWVVIPP_					0	0	0		ENSG00000103522|ENST00000337929|IL21R	ENSG00000103522|ENST00000337929|IL21R	ENSG00000103522|ENST00000337929|IL21R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.7970886230469	2	497.795269	993.575986	-0.62467	-0.00031096	1.8609	0.00092635	1.2362	0.0006154	497.7959443257759	48.896	1.0734	48.921	48.637	49.71	0.025574					60	26	3	0	0	0	0.82464	1	3819	3819		21.702	0	1	414050			50297	2088	33781	33794	56757	56757					0.0789407426799471
RQYDKFLTH	9	Unmodified	_RQYDKFLTH_					0	0	0		ENSG00000165355|ENST00000298097|FBXO33	ENSG00000165355|ENST00000298097|FBXO33	ENSG00000165355|ENST00000298097|FBXO33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.2129211425781	3	403.212128	1206.61456	1.6085	0.00064856	-1.2825	-0.00051713	0.32595	0.00013143	403.21141886230924	33.308	0.59134	33.477	33.229	33.821	0.16971					32	13	3	0	0	0	0.34325	2	2398	2387;2398		61.691	31.374	1	407680			50298	6074	33782	33795	56758;56759	56759					0.01951335111834851
RQYDKFLTH	9	Unmodified	_RQYDKFLTH_					0	0	0		ENSG00000165355|ENST00000298097|FBXO33	ENSG00000165355|ENST00000298097|FBXO33	ENSG00000165355|ENST00000298097|FBXO33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.2118225097656	3	403.212128	1206.61456	0.8168	0.00032935	-0.68477	-0.00027611	0.13204	5.3239E-05	403.21165244541567	33.273	0.59227	33.485	33.186	33.778	0.21168					32	13	3	0	0	0	0.21553	1	2404	2404		72.243	30.817	1	518270			50299	6074	33782	33795	56760	56760					0.01951335111834851
RQYLVCKRK	9	Carbamidomethyl (C)	_RQYLVC(Carbamidomethyl (C))KRK_	RQYLVC(1)KRK		RQYLVC(44)KRK		0	1	0		ENST00000324309.8_1_4:24833126-24981729:-|nuORF	ENST00000324309.8_1_4:24833126-24981729:-|nuORF	ENST00000324309.8_1_4:24833126-24981729:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.57562255859375	3	417.576525	1249.70774	0.01401	5.8505E-06	-2.5142	-0.0010499	-2.5002	-0.001044	417.57545004424423	21.793	0.92327	21.165	20.804	21.727	-0.62835					70	23	4	0	0	0	0.64555	1	852	852		44.377	6.5657	1	1387700			50300	10057	33783	33796	56761	56761	131				0.09287936293412713
RQYMKSPQLT	10	Unmodified	_RQYMKSPQLT_					0	0	0		L1M3_dup5191|chr13:100538615-100539826:-|1.143422986957237|0.4271131615856792|1.42|63.0|16|2|sense	L1M3_dup5191|chr13:100538615-100539826:-|1.143422986957237|0.4271131615856792|1.42|63.0|16|2|sense	L1M3_dup5191|chr13:100538615-100539826:-|1.143422986957237|0.4271131615856792|1.42|63.0|16|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3251953125	2	626.329347	1250.64414	0.51805	0.00032447	-3.454	-0.0021633	-2.9359	-0.0018389	626.327052372798	55.472	0.31803	55.563	55.495	55.813	0.091167					14	9	2	0	0	0	0.85979	1	4655	4655		37.812	12.686	1	139780			50301	14517	33784	33797	56762	56762					0.028845310656834044
RQYNKISYVL	10	Unmodified	_RQYNKISYVL_					0	0	0		nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8;ENSG00000124721|ENST00000327475|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3626098632812	2	642.358962	1282.70337	7.1448	0.0045895	-2.0976	-0.0013474	5.0473	0.0032422	642.3585751725324	110.49	1.1397	110.55	110.17	111.3	0.058884					162	41	4	0	0	0	0.71042	1	13466	13466		44.117	2.6902	1	2259100			50302	3354	33785	33798	56763	56763					0.0733275035152019
RRAAALPN	8	Unmodified	_RRAAALPN_					0	0	0		ENST00000345392.2_1_3:10183791-10191525:+|nuORF	ENST00000345392.2_1_3:10183791-10191525:+|nuORF	ENST00000345392.2_1_3:10183791-10191525:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.760009765625	2	434.759218	867.503883	1.0426	0.00045328	-1.4353	-0.00062401	-0.39271	-0.00017073	434.7588689622068	87.637	3.2918	87.563	86.012	89.304	-0.073997					167	77	4	0	0	0	0.90465	1	9050	9050		40.573	10.069	1	1572200			50303	10304	33786	33799	56764	56764					0.06483159914273529
RRAAAVKATQT	11	Unmodified	_RRAAAVKATQT_					0	0	0		ENSG00000156030|ENST00000423556|MIDEAS;nc|ENSG00000156030|Q6PJG2|MIDEAS	ENSG00000156030|ENST00000423556|MIDEAS	ENSG00000156030|ENST00000423556|MIDEAS	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.8345947265625	2	586.846553	1171.67855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.25	1	113.25	112.75	113.75	0								0	0	0	0.56276	1	11704	11704		17.468	0.99486	1				50304	5359	33787	33800	56765	56765					0.09958115268796064
RRAAKGFLKLG	11	Unmodified	_RRAAKGFLKLG_					0	0	0		ENSG00000103740|ENST00000258873|ACSBG1	ENSG00000103740|ENST00000258873|ACSBG1	ENSG00000103740|ENST00000258873|ACSBG1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2578430175781	3	406.259413	1215.75641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.129	1	56.092	55.592	56.592	-0.036827								0	0	0	0.56276	1	4735	4735		18.531	0.69791	1				50305	2099	33788	33801	56766	56766					0.15716172924840066
RRAAPPSA	8	Unmodified	_RRAAPPSA_					0	0	0			REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2368469238281	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.87922	1	7295	7295		31.955	4.0726	1	1747900	+		50306	20776	33789	33802	56767	56767					0.04243184505889985
RRAAPPSA	8	Unmodified	_RRAAPPSA_					0	0	0			REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2367248535156	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.85277	1	7352	7352		25.45	2.4077	1	2127000	+		50307	20776	33789	33802	56768	56768					0.04243184505889985
RRAAPPSA	8	Unmodified	_RRAAPPSA_					0	0	0			REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2372741699219	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.884	1	6904	6904		33.516	13.034	1	1692300	+		50308	20776	33789	33802	56769	56769					0.04243184505889985
RRAAPPSA	8	Unmodified	_RRAAPPSA_					0	0	0			REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2379455566406	2	413.238119	824.461684	-0.091267	-3.7715E-05	0.27761	0.00011472	0.18635	7.7005E-05	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.85277	1	8690	8690		25.45	2.4077	1	1247200	+		50309	20776	33789	33802	56770	56770					0.04243184505889985
RRAARLQP	8	Unmodified	_RRAARLQP_					0	0	0		ENST00000527464.5_1_11:47270203-47282963:+|nuORF;ENST00000529540.5_1_11:47269870-47282963:+|nuORF	ENST00000527464.5_1_11:47270203-47282963:+|nuORF	ENST00000527464.5_1_11:47270203-47282963:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.2856750488281	2	484.299042	966.583531	0.18966	9.1851E-05	3.0402	0.0014724	3.2299	0.0015642	484.3003959660172	60.688	0.49938	60.656	60.438	60.938	-0.032509					25	14	2	0	0	0	0.4196	1	5712	5712		50.025	16.509	1	142460			50310	13288	33790	33803	56771	56771					0.09890226588265705
RRAARVPS	8	Unmodified	_RRAARVPS_					0	0	0		ENST00000282701.2_1_4:81952173-81952551:+|nuORF	ENST00000282701.2_1_4:81952173-81952551:+|nuORF	ENST00000282701.2_1_4:81952173-81952551:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7930603027344	2	456.777942	911.541332	-0.88363	-0.00040362	-3.2309	-0.0014758	-4.1146	-0.0018794	456.7765441744648	36.741	0.62352	36.688	36.426	37.049	-0.053558					21	13	2	0	0	0	0.4196	1	2482	2482		24.203	0	1	35400			50311	9639	33791	33804	56772	56772					0.08202251179886844
RRAEPGGP	8	Unmodified	_RRAEPGGP_					0	0	0		ENST00000222573.4_1_7:20371057-20371243:+|nuORF	ENST00000222573.4_1_7:20371057-20371243:+|nuORF	ENST00000222573.4_1_7:20371057-20371243:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.226806640625	2	420.227751	838.440949	-0.18786	-7.8944E-05	0.38594	0.00016218	0.19808	8.324E-05	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.91005	1	7397	7397		42.474	3.453	1	279000			50312	9177	33792	33805	56773	56773					0.015265941262327942
RRAEPGPG	8	Unmodified	_RRAEPGPG_					0	0	0		ENSG00000165566|ENST00000515384|AMER2	ENSG00000165566|ENST00000515384|AMER2	ENSG00000165566|ENST00000515384|AMER2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2269592285156	2	420.227751	838.440949	2.3003	0.00096666	-2.0316	-0.00085375	0.26868	0.00011291	420.2267541958877	76.314	2.1809	76.362	74.634	76.815	0.047974					151	68	3	0	0	0	0.92457	1	7426	7426		47.916	5.4411	1	250270			50313	6096	33793	33806	56774	56774					0.015265941262327942
RRAFRVAH	8	Unmodified	_RRAFRVAH_					0	0	0			REV__ENSG00000225614|ENST00000565624|ZNF469	REV__ENSG00000225614|ENST00000565624|ZNF469	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.7966003417969	2	506.799209	1011.58387	-0.1225	-6.2083E-05	3.8484	0.0019504	3.7259	0.0018883	506.8011249172422	46.216	2.1586	46.137	45.418	47.576	-0.079006					85	63	2	0	0	0	0.86791	1	3454	3454		28.254	0.37203	1	271040	+		50314	23739	33794	33807	56775	56775					0.07853646308126372
RRAGALAP	8	Unmodified	_RRAGALAP_					0	0	0		nc|ENSG00000175287|Q5SRE7-3|PHYHD1	nc|ENSG00000175287|Q5SRE7-3|PHYHD1	nc|ENSG00000175287|Q5SRE7-3|PHYHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24835205078125	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.86288	1	9240	9240		26.796	0	1	56664000			50315	15109	33795	33808	56776	56776					0.06959774885558545
RRAGALAP	8	Unmodified	_RRAGALAP_					0	0	0		nc|ENSG00000175287|Q5SRE7-3|PHYHD1	nc|ENSG00000175287|Q5SRE7-3|PHYHD1	nc|ENSG00000175287|Q5SRE7-3|PHYHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.24859619140625	2	406.248486	810.48242	-1.235	-0.0005017	1.527	0.00062034	0.29202	0.00011863	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.86791	1	10540	10540		28.254	0	1	38125000			50316	15109	33795	33808	56777	56777					0.06959774885558545
RRAGAPTP	8	Unmodified	_RRAGAPTP_					0	0	0			REV__ENST00000263269.3_1_19:48946008-48947172:+|nuORF	REV__ENST00000263269.3_1_19:48946008-48947172:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2373962402344	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.85277	1	7557	7557		25.45	1.2474	1	2012200	+		50317	24443	33796	33809	56778	56778					0.04243184505889985
RRAGLPGLG	9	Unmodified	_RRAGLPGLG_					0	0	0			REV__nc|ENSG00000132003|Q9H7M6|ZSWIM4	REV__nc|ENSG00000132003|Q9H7M6|ZSWIM4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.7738342285156	2	448.774868	895.535184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.472	1	41.476	40.976	41.976	0.0039291								0	0	0	0.32542	1	3057	3057		21.702	1.2205	1		+		50318	18980	33797	33810	56779	56779					0.08323732948372253
RRAGMDRQ	8	Unmodified	_RRAGMDRQ_					0	0	0			REV__ENST00000430627.6_1_17:37618283-37618493:+|nuORF	REV__ENST00000430627.6_1_17:37618283-37618493:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	495.2647399902344	2	495.256517	988.49848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.872	1	78.999	78.499	79.499	0.12695								0	0	0	0.3055	1	7456	7456		44.117	10.195	1		+		50319	26608	33798	33811	56780	56780					0.003771130601535333
RRAGPALA	8	Unmodified	_RRAGPALA_					0	0	0			REV__ENST00000281961.2_1_2:39893203-39931290:+|nuORF	REV__ENST00000281961.2_1_2:39893203-39931290:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24835205078125	2	406.248486	810.48242	3.1803	0.001292	-2.4584	-0.00099873	0.7219	0.00029327	406.2473607643489	90.704	2.3213	90.75	90.262	92.583	0.046448					123	55	3	0	0	0	0.81548	1	9387	9387		20.482	0	1	1081600	+		50320	24609	33799	33812	56781	56781					0.06959774885535808
RRAGPGGR	8	Unmodified	_RRAGPGGR_					0	0	0			REV__ENST00000488751.1_1_7:99156525-99158253:+|nuORF	REV__ENST00000488751.1_1_7:99156525-99158253:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.23773193359375	2	413.74136	825.468167	-1.3451	-0.00055653	-2.1848	-0.00090393	-3.5299	-0.0014605	413.7404502807602	77.08	1.3212	77.08	75.988	77.309	0					94	55	2	0	0	0	0.4196	1	7016	7016		25.45	7.1258	1	523850	+		50321	18640	33800	33813	56782	56782					0.048451224572772844
RRAGPGGR	8	Unmodified	_RRAGPGGR_					0	0	0			REV__ENST00000488751.1_1_7:99156525-99158253:+|nuORF	REV__ENST00000488751.1_1_7:99156525-99158253:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	413.74136	825.468167	0.9921	0.00041047	-4.85	-0.0020066	-3.8579	-0.0015962	413.7394249975451	76.659	1.2057	77.058	75.998	77.204	0.39969	0.019949	-0.002066	NaN	25.45	43	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	329990	+		50322	18640	33800	33813							0.048451224572772844
RRAGPIAA	8	Unmodified	_RRAGPIAA_					0	0	0			REV__ENST00000366855.10_1_6:167369840-167369993:-|nuORF	REV__ENST00000366855.10_1_6:167369840-167369993:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.247802734375	2	406.248486	810.48242	-1.9275	-0.00078306	2.6578	0.0010797	0.73023	0.00029665	406.2494715444893	90.638	1.8224	90.818	90.389	92.211	0.18029					100	43	3	0	0	0	0.86791	1	9097	9097		28.254	7.7724	1	761320	+		50323	25539	33801	33814	56783	56783					0.06959774885547176
RRAGQRGVPRL	11	Unmodified	_RRAGQRGVPRL_					0	0	0		ENST00000339364.9_1_10:98469376-98469727:-|nuORF	ENST00000339364.9_1_10:98469376-98469727:-|nuORF	ENST00000339364.9_1_10:98469376-98469727:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.5918273925781	3	422.593566	1264.75887	-0.54234	-0.00022919	-1.4881	-0.00062886	-2.0304	-0.00085805	422.5928449927352	47.261	3.402	47.732	47.137	50.539	0.47139					194	83	4	0	0	0	0.71207	1	4569	4569		29.551	0.97402	1	3501000			50324	10220	33802	33815	56784	56784					0.13708021382512925
RRAGQRGVPRL	11	Unmodified	_RRAGQRGVPRL_					0	0	0		ENST00000339364.9_1_10:98469376-98469727:-|nuORF	ENST00000339364.9_1_10:98469376-98469727:-|nuORF	ENST00000339364.9_1_10:98469376-98469727:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.5924377441406	3	422.593566	1264.75887	-0.80518	-0.00034026	-0.93157	-0.00039367	-1.7367	-0.00073394	422.59310710706274	46.905	2.5172	47.828	47.069	49.587	0.92315					149	61	4	0	0	0	0.71803	2	4491	4491;4504		28.577	0.49524	1	3696000			50325	10220	33802	33815	56785;56786	56785					0.13708021382512925
RRAGRVLPAP	10	Unmodified	_RRAGRVLPAP_					0	0	0		ENST00000490165.5_1_X:152721060-152721751:-|nuORF	ENST00000490165.5_1_X:152721060-152721751:-|nuORF	ENST00000490165.5_1_X:152721060-152721751:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8399658203125	2	546.841074	1091.66759	-0.41161	-0.00022509	-2.2056	-0.0012061	-2.6172	-0.0014312	546.8400747085221	101.16	3.89	101.19	100.52	104.41	0.031036					283	93	6	0	0	0	0.85934	3	10839	10743;10839;11062		35.618	5.1146	1	40007000			50326	12664	33803	33816	56787;56788;56789	56788					0.12542757685150718
RRAGRVLPAP	10	Unmodified	_RRAGRVLPAP_					0	0	0		ENST00000490165.5_1_X:152721060-152721751:-|nuORF	ENST00000490165.5_1_X:152721060-152721751:-|nuORF	ENST00000490165.5_1_X:152721060-152721751:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.840087890625	2	546.841074	1091.66759	0.19665	0.00010754	-2.8678	-0.0015682	-2.6712	-0.0014607	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.86589	2	10525	10525;10784		29.15	3.6994	1	55511000			50327	12664	33803	33816	56790;56791	56790					0.12542757685150718
RRAGVVPG	8	Unmodified	_RRAGVVPG_					0	0	0			REV__nc|ENSG00000085644|O14771-2|ZNF213	REV__nc|ENSG00000085644|O14771-2|ZNF213	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2481689453125	2	406.248486	810.48242	-1.8141	-0.00073698	2.0083	0.00081588	0.1942	7.8892E-05	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.86288	1	8972	8972		26.796	2.5934	1	42617000	+		50328	16895	33804	33817	56792	56792					0.06959774885558545
RRAGVVPG	8	Unmodified	_RRAGVVPG_					0	0	0			REV__nc|ENSG00000085644|O14771-2|ZNF213	REV__nc|ENSG00000085644|O14771-2|ZNF213	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24755859375	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.82464	2	10594	10521;10594		37.028	5.0736	1	28266000	+		50329	16895	33804	33817	56793;56794	56794					0.06959774885558545
RRAHGPEE	8	Unmodified	_RRAHGPEE_					0	0	0		nc|ENSG00000185651|P68036-3|UBE2L3	nc|ENSG00000185651|P68036-3|UBE2L3	nc|ENSG00000185651|P68036-3|UBE2L3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.2362365722656	2	476.24139	950.468226	-1.1477	-0.0005466	-4.3941	-0.0020927	-5.5419	-0.0026393	476.238349885479	81.836	2.4474	81.836	81.098	83.546	0					125	68	3	0	0	0	0.87479	1	7574	7574		30.504	4.4403	1	94771			50330	15152	33805	33818	56795	56795					-0.008989223333855989
RRAHRGLF	8	Unmodified	_RRAHRGLF_					0	0	0			REV__ENST00000604306.1_1_14:24684951-24700866:-|nuORF	REV__ENST00000604306.1_1_14:24684951-24700866:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.80047607421875	2	506.799209	1011.58387	-0.0091152	-4.6196E-06	3.3558	0.0017007	3.3467	0.0016961	506.8008715270005	45.074	2.5803	45.918	44.736	47.316	0.84438					87	63	2	0	0	0	0.88915	1	4199	4199		35.201	1.0282	1	481050	+		50331	29356	33806	33819	56796	56796					0.0785364630813774
RRAIVHPISA	10	Unmodified	_RRAIVHPISA_					0	0	0			REV__ENSG00000113812|ENST00000335754|ACTR8	REV__ENSG00000113812|ENST00000335754|ACTR8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3421630859375	2	560.340907	1118.66726	3.1454	0.0017625	-4.1604	-0.0023312	-1.015	-0.00056875	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.86218	2	13029	12891;13029		32.812	10.853	1	151040	+		50332	18018	33807	33820	56797;56798	56798					0.11267337965318802
RRAKQGELKR	10	Unmodified	_RRAKQGELKR_					0	0	0		ENSG00000250844|ENST00000504209|USP17L18;ENSG00000225327|ENST00000530484|USP17L3;ENSG00000230549|ENST00000529559|USP17L1	ENSG00000250844|ENST00000504209|USP17L18	ENSG00000250844|ENST00000504209|USP17L18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.383056640625	2	621.381094	1240.74764	0.89065	0.00055343	2.2838	0.0014191	3.1744	0.0019725	621.3824533727919	18.116	0.69889	17.639	17.425	18.124	-0.47694					28	14	3	0	0	0	0.60066	1	342	342		54.776	1.8396	1	515430			50333	8851	33808	33821	56799	56799					0.13689199288342024
RRALAPTG	8	Unmodified	_RRALAPTG_					0	0	0			REV__ENST00000460419.1_1_3:182971715-182987339:+|nuORF	REV__ENST00000460419.1_1_3:182971715-182987339:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.2539367675781	2	421.253769	840.492984	0.67687	0.00028514	-0.16156	-6.8057E-05	0.51531	0.00021708	421.25351698068755	84.328	1.4775	84.259	83.718	85.196	-0.069313					81	33	3	0	0	0	0.86288	1	8628	8628		26.796	1.3459	1	949480	+		50334	27003	33809	33822	56800	56800					0.06635757539993392
RRALFRYLKVL	11	Unmodified	_RRALFRYLKVL_					0	0	0			REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9739685058594	3	478.973384	1433.89832	-1.6788	-0.00080411	3.2689	0.0015657	1.5901	0.0007616	479.3090926937771	44.658	1.9564	44.658	43.823	45.779	0					118	47	4	0	0	0	0.78683	1	3395	3395		14.086	0.57807	1	394570	+		50335	16469	33810	33823	56801	56801					0.19872965947138255
RRALFRYLKVL	11	Unmodified	_RRALFRYLKVL_					0	0	0			REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.30865478515625	3	478.973384	1433.89832	0.1614	7.7307E-05	2.071	0.00099196	2.2324	0.0010693	478.974258997061	46.621	1.762	46.607	45.625	47.387	-0.013821					99	45	3	0	0	0	0.84494	1	3848	3848		6.3209	0.31984	1	179760	+		50336	16469	33810	33823	56802	56802					0.19872965947138255
RRALFRYLKVL	11	Unmodified	_RRALFRYLKVL_					0	0	0			REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9739990234375	3	478.973384	1433.89832	-0.022494	-1.0774E-05	2.5633	0.0012277	2.5408	0.001217	478.9744999510038	52.877	2.746	52.874	51.525	54.271	-0.0033035					162	72	3	0	0	0	0.8498	1	4468	4468		6.001	0	1	150480	+		50337	16469	33810	33823	56803	56803					0.19872965947138255
RRALFRYLKVL	11	Unmodified	_RRALFRYLKVL_					0	0	0			REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9742736816406	3	478.973384	1433.89832	-0.72158	-0.00034562	3.2574	0.0015602	2.5358	0.0012146	478.97494935068806	47.94	1.1198	47.915	47.673	48.793	-0.025326					45	28	2	0	0	0	0.8498	1	4132	4132		6.001	0.58812	1	261310	+		50338	16469	33810	33823	56804	56804					0.19872965947138255
RRALFRYLKVL	11	Unmodified	_RRALFRYLKVL_					0	0	0			REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9723815917969	3	478.973384	1433.89832	-0.69274	-0.0003318	2.9962	0.0014351	2.3035	0.0011033	478.9746813820608	49.583	2.3312	49.559	48.401	50.732	-0.024033					111	53	3	0	0	0	0.80813	1	4293	4293		9.6461	3.3253	1	142150	+		50339	16469	33810	33823	56805	56805					0.19872965947138255
RRALFRYLKVL	11	Unmodified	_RRALFRYLKVL_					0	0	0			REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9750061035156	3	478.973384	1433.89832	-0.90815	-0.00043498	3.264	0.0015634	2.3558	0.0011284	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.80813	1	3451	3451		9.6461	3.3253	1	368580	+		50340	16469	33810	33823	56806	56806					0.19872965947138255
RRALFRYLKVL	11	Unmodified	_RRALFRYLKVL_					0	0	0			REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3090515136719	3	478.973384	1433.89832	0.29105	0.00013941	2	0.00095795	2.2911	0.0010974	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.80593	1	3422	3422		10.104	3.783	1	395190	+		50341	16469	33810	33823	56807	56807					0.19872965947138255
RRALFRYLKVL	11	Unmodified	_RRALFRYLKVL_					0	0	0			REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9747619628906	3	478.973384	1433.89832	0.32204	0.00015425	2.3016	0.0011024	2.6237	0.0012567	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.7896	1	3870	3870		13.508	0.55046	1	307830	+		50342	16469	33810	33823	56808	56808					0.19872965947138255
RRALFRYLKVL	11	Unmodified	_RRALFRYLKVL_					0	0	0			REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9739685058594	3	478.973384	1433.89832	0.41435	0.00019846	1.9079	0.00091386	2.3223	0.0011123	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.78683	1	5120	5120		14.086	2.6314	1	131420	+		50343	16469	33810	33823	56809	56809					0.19872965947138255
RRALGRPGRLQ	11	Unmodified	_RRALGRPGRLQ_					0	0	0			REV__ENST00000537726.5_1_15:80445384-80454681:+|nuORF	REV__ENST00000537726.5_1_15:80445384-80454681:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3944091796875	2	640.394536	1278.77452	0.064657	4.1406E-05	-2.7522	-0.0017625	-2.6875	-0.0017211	640.3927299544963	53.652	0.88778	53.59	53.086	53.973	-0.062065					49	22	3	0	0	0	0.72918	1	4409	4409		26.693	4.1133	1	245330	+		50344	28424	33811	33824	56810	56810					0.1462830789957934
RRALMVTIF	9	Unmodified	_RRALMVTIF_					0	0	0			REV__ENSG00000176142|ENST00000319172|TMEM39A	REV__ENSG00000176142|ENST00000319172|TMEM39A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.830322265625	2	553.828786	1105.64302	-0.44019	-0.00024379	3.3126	0.0018346	2.8724	0.0015908	553.8305183816093	102.73	0.52669	102.73	102.43	102.96	0					32	12	3	0	0	0	0.7932	1	10514	10514		24.203	4.8428	1	456910	+		50345	22110	33812	33825	56811	56811					0.09442361487435846
RRALRELF	8	Unmodified	_RRALRELF_					0	0	0			REV__ENST00000482470.5_1_7:134552484-134644871:+|nuORF	REV__ENST00000482470.5_1_7:134552484-134644871:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8203125	2	530.82235	1059.63015	-0.047896	-2.5424E-05	-2.2763	-0.0012083	-2.3242	-0.0012337	530.8209770202351	79.275	0.97966	79.825	79.318	80.298	0.54945					57	22	3	0	0	0	0.89962	1	9102	9102		38.806	1.647	1	876930	+		50346	18516	33813	33826	56812	56812					0.10271666419566827
RRALVPDS	8	Unmodified	_RRALVPDS_					0	0	0			REV__nc|ENSG00000204209|Q9UER7-5|DAXX	REV__nc|ENSG00000204209|Q9UER7-5|DAXX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2618103027344	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.85277	1	7736	7736		25.45	0	1	1458600	+		50347	30159	33814	33827	56813	56813					0.05435722848858404
RRAPAAGL	8	Unmodified	_RRAPAAGL_					0	0	0		nc|ENSG00000187260|Q86TI4-4|WDR86	nc|ENSG00000187260|Q86TI4-4|WDR86	nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.248046875	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.81724	1	9339	9339		14.664	0	1	56664000			50348	15165	33815	33828	56814	56814					0.06959774885547176
RRAPIARQLSR	11	Unmodified	_RRAPIARQLSR_					0	0	0			REV__ENST00000342879.7_1_19:35645831-35645993:+|nuORF	REV__ENST00000342879.7_1_19:35645831-35645993:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.9398498535156	3	441.940855	1322.80073	-0.13164	-5.8177E-05	-2.1685	-0.00095836	-2.3002	-0.0010165	441.93974761618824	56.948	1.0225	56.935	56.674	57.696	-0.012203					78	36	3	0	0	0	0.75779	1	5104	5104		20.315	0.28454	1	317980	+		50349	25279	33816	33829	56815	56815					0.15224577071035128
RRAPIARQLSR	11	Unmodified	_RRAPIARQLSR_					0	0	0			REV__ENST00000342879.7_1_19:35645831-35645993:+|nuORF	REV__ENST00000342879.7_1_19:35645831-35645993:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9390869140625	3	441.940855	1322.80073	-0.69974	-0.00030924	-1.673	-0.00073935	-2.3727	-0.0010486	441.9399909148648	56.856	0.75961	56.83	56.632	57.391	-0.026108					86	36	3	0	0	0	0.75779	1	4816	4816		20.315	1.0523	1	338630	+		50350	25279	33816	33829	56816	56816					0.15224577071035128
RRAPLQLLNDT	11	Unmodified	_RRAPLQLLNDT_					0	0	0			REV__ENST00000434568.5_1_22:19121711-19126708:-|nuORF	REV__ENST00000434568.5_1_22:19121711-19126708:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.8739013671875	2	648.872768	1295.73098	-0.023314	-1.5128E-05	-1.6508	-0.0010712	-1.6741	-0.0010863	648.8718934238251	99.773	2.6976	99.773	98.424	101.12	0					124	64	3	0	0	0	0.7144	1	10149	10149		29.17	3.1067	1	156470	+		50351	17132	33817	33830	56817	56817					0.09494653611773174
RRAPPLQTL	9	Unmodified	_RRAPPLQTL_					0	0	0			REV__ENST00000573346.5_1_17:78175550-78177620:-|nuORF	REV__ENST00000573346.5_1_17:78175550-78177620:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3262329101562	2	526.322183	1050.62981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.048	1	51.098	50.598	51.598	0.049896								0	0	0	0.31828	1	4044	4044		24.203	1.1603	1		+		50352	28959	33818	33831	56818	56818					0.10652246699692114
RRAPPPSA	8	Unmodified	_RRAPPPSA_					0	0	0			REV__nc|ENSG00000106948|Q7Z591-5|AKNA	REV__nc|ENSG00000106948|Q7Z591-5|AKNA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	426.2459411621094	2	426.245944	850.477334	-1.1835	-0.00050446	1.4503	0.00061817	0.26676	0.0001137	426.24646575286147	87.846	4.0837	87.846	85.783	89.866	0					184	94	2	0	0	0	0.85277	1	8406	8406		25.45	6.0902	1	2605100	+		50353	17637	33819	33832	56819	56819					0.0461147102294035
RRAPPPSA	8	Unmodified	_RRAPPPSA_					0	0	0			REV__nc|ENSG00000106948|Q7Z591-5|AKNA	REV__nc|ENSG00000106948|Q7Z591-5|AKNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2460021972656	2	426.245944	850.477334	2.6022	0.0011092	-2.3558	-0.0010042	0.24641	0.00010503	426.2448505635507	87.493	3.3011	87.546	86.187	89.488	0.053024					131	77	2	0	0	0	0.80706	1	8946	8946		19.36	1.0356	1	4266000	+		50354	17637	33819	33832	56820	56820					0.0461147102294035
RRAPPPSA	8	Unmodified	_RRAPPPSA_					0	0	0			REV__nc|ENSG00000106948|Q7Z591-5|AKNA	REV__nc|ENSG00000106948|Q7Z591-5|AKNA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.24591064453125	2	426.245944	850.477334	-1.7038	-0.00072625	1.9277	0.00082165	0.22383	9.5406E-05	426.246697883185	87.448	3.9173	87.649	85.72	89.637	0.20114					165	92	2	0	0	0	0.86288	1	8695	8695		26.796	1.3459	1	4015800	+		50355	17637	33819	33832	56821	56821					0.0461147102294035
RRAPPPSA	8	Unmodified	_RRAPPPSA_					0	0	0			REV__nc|ENSG00000106948|Q7Z591-5|AKNA	REV__nc|ENSG00000106948|Q7Z591-5|AKNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2459716796875	2	426.245944	850.477334	-0.71681	-0.00030554	0.86718	0.00036963	0.15037	6.4093E-05	426.24624802256477	87.382	3.0594	87.845	86.168	89.227	0.46312					121	74	2	0	0	0	0.87922	1	10330	10330		31.955	0	1	3022100	+		50356	17637	33819	33832	56822	56822					0.0461147102294035
RRAQLAGVLLI	11	Unmodified	_RRAQLAGVLLI_					0	0	0		ENST00000471373.5_1_3:170139112-170178121:+|nuORF;ENST00000468358.5_1_3:170139112-170150991:+|nuORF;ENST00000489485.5_1_3:170139112-170150541:+|nuORF;ENST00000486429.1_1_3:170136842-170141147:+|nuORF;ENSG00000013297|ENST00000064724|CLDN11	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.92999267578125	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.732	3	3681	3542;3575;3681		26.063	2.5407	1	2526100			50357	808	33820	33833	56823;56824;56825	56825					0.1756903972204782
RRAQLAGVLLI	11	Unmodified	_RRAQLAGVLLI_					0	0	0		ENST00000471373.5_1_3:170139112-170178121:+|nuORF;ENST00000468358.5_1_3:170139112-170150991:+|nuORF;ENST00000489485.5_1_3:170139112-170150541:+|nuORF;ENST00000486429.1_1_3:170136842-170141147:+|nuORF;ENSG00000013297|ENST00000064724|CLDN11	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.929443359375	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.74555	6	3813	3802;3813;3833;3883;3944;4017		15.333	3.4992	1	2636600			50358	808	33820	33833	56826;56827;56828;56829;56830;56831	56827					0.1756903972204782
RRAQLAGVLLI	11	Unmodified	_RRAQLAGVLLI_					0	0	0		ENST00000471373.5_1_3:170139112-170178121:+|nuORF;ENST00000468358.5_1_3:170139112-170150991:+|nuORF;ENST00000489485.5_1_3:170139112-170150541:+|nuORF;ENST00000486429.1_1_3:170136842-170141147:+|nuORF;ENSG00000013297|ENST00000064724|CLDN11	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.92913818359375	3	403.931185	1208.77173	0.25098	0.00010138	-4.1453	-0.0016744	-3.8943	-0.001573	403.92942319004646	47.073	4.6899	47.112	45.811	50.501	0.038181					268	130	4	0	0	0	0.74555	4	3472	3472;3484;3493;3505		14.694	0.4829	1	2178500			50359	808	33820	33833	56832;56833;56834;56835	56832					0.1756903972204782
RRAQLAGVLLI	11	Unmodified	_RRAQLAGVLLI_					0	0	0		ENST00000471373.5_1_3:170139112-170178121:+|nuORF;ENST00000468358.5_1_3:170139112-170150991:+|nuORF;ENST00000489485.5_1_3:170139112-170150541:+|nuORF;ENST00000486429.1_1_3:170136842-170141147:+|nuORF;ENSG00000013297|ENST00000064724|CLDN11	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9293212890625	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.87	1	46.783	46.283	47.283	-0.087646								0	0	0	0.56276	1	3468	3468		14.694	1.1857	1				50360	808	33820	33833	56836	56836					0.1756903972204782
RRAQLAGVLLI	11	Unmodified	_RRAQLAGVLLI_					0	0	0		ENST00000471373.5_1_3:170139112-170178121:+|nuORF;ENST00000468358.5_1_3:170139112-170150991:+|nuORF;ENST00000489485.5_1_3:170139112-170150541:+|nuORF;ENST00000486429.1_1_3:170136842-170141147:+|nuORF;ENSG00000013297|ENST00000064724|CLDN11	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9294128417969	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.008	1	46.92	46.42	47.42	-0.087646								0	0	0	0.56276	1	3487	3487		14.694	5.8944	1				50361	808	33820	33833	56837	56837					0.1756903972204782
RRAQLAGVLLI	11	Unmodified	_RRAQLAGVLLI_					0	0	0		ENST00000471373.5_1_3:170139112-170178121:+|nuORF;ENST00000468358.5_1_3:170139112-170150991:+|nuORF;ENST00000489485.5_1_3:170139112-170150541:+|nuORF;ENST00000486429.1_1_3:170136842-170141147:+|nuORF;ENSG00000013297|ENST00000064724|CLDN11	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.92938232421875	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.073	1	46.985	46.485	47.485	-0.087646								0	0	0	0.56276	1	3496	3496		10.104	0.8921	1				50362	808	33820	33833	56838	56838					0.1756903972204782
RRAQLAGVLLI	11	Unmodified	_RRAQLAGVLLI_					0	0	0		ENST00000471373.5_1_3:170139112-170178121:+|nuORF;ENST00000468358.5_1_3:170139112-170150991:+|nuORF;ENST00000489485.5_1_3:170139112-170150541:+|nuORF;ENST00000486429.1_1_3:170136842-170141147:+|nuORF;ENSG00000013297|ENST00000064724|CLDN11	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9293212890625	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.188	1	47.1	46.6	47.6	-0.087646								0	0	0	0.56276	1	3512	3512		10.104	0	1				50363	808	33820	33833	56839	56839					0.1756903972204782
RRAQLAGVLLI	11	Unmodified	_RRAQLAGVLLI_					0	0	0		ENST00000471373.5_1_3:170139112-170178121:+|nuORF;ENST00000468358.5_1_3:170139112-170150991:+|nuORF;ENST00000489485.5_1_3:170139112-170150541:+|nuORF;ENST00000486429.1_1_3:170136842-170141147:+|nuORF;ENSG00000013297|ENST00000064724|CLDN11	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.92938232421875	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.296	1	48.203	47.703	48.703	-0.093178								0	0	0	0.56276	1	3669	3669		10.587	0	1				50364	808	33820	33833	56840	56840					0.1756903972204782
RRAQLAGVLLI	11	Unmodified	_RRAQLAGVLLI_					0	0	0		ENST00000471373.5_1_3:170139112-170178121:+|nuORF;ENST00000468358.5_1_3:170139112-170150991:+|nuORF;ENST00000489485.5_1_3:170139112-170150541:+|nuORF;ENST00000486429.1_1_3:170136842-170141147:+|nuORF;ENSG00000013297|ENST00000064724|CLDN11	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9289245605469	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.787	1	48.694	48.194	49.194	-0.093178								0	0	0	0.56276	1	3737	3737		20.03	11.623	1				50365	808	33820	33833	56841	56841					0.1756903972204782
RRAQLAGVLLI	11	Unmodified	_RRAQLAGVLLI_					0	0	0		ENST00000471373.5_1_3:170139112-170178121:+|nuORF;ENST00000468358.5_1_3:170139112-170150991:+|nuORF;ENST00000489485.5_1_3:170139112-170150541:+|nuORF;ENST00000486429.1_1_3:170136842-170141147:+|nuORF;ENSG00000013297|ENST00000064724|CLDN11	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9296875	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.868	1	48.774	48.274	49.274	-0.093178								0	0	0	0.56276	1	3748	3748		14.694	0	1				50366	808	33820	33833	56842	56842					0.1756903972204782
RRAQLAGVLLI	11	Unmodified	_RRAQLAGVLLI_					0	0	0		ENST00000471373.5_1_3:170139112-170178121:+|nuORF;ENST00000468358.5_1_3:170139112-170150991:+|nuORF;ENST00000489485.5_1_3:170139112-170150541:+|nuORF;ENST00000486429.1_1_3:170136842-170141147:+|nuORF;ENSG00000013297|ENST00000064724|CLDN11	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	ENST00000471373.5_1_3:170139112-170178121:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92901611328125	3	403.931185	1208.77173	-1.067	-0.00043099	-3.6376	-0.0014693	-4.7046	-0.0019003	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.75041	2	4159	4159;4245		14.086	0	1	5907700			50367	808	33820	33833	56843;56844	56843					0.1756903972204782
RRARGRRRR	9	Unmodified	_RRARGRRRR_					0	0	0			REV__ENST00000403734.2_1_11:62494359-62494803:-|nuORF	REV__ENST00000403734.2_1_11:62494359-62494803:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.9322204589844	3	413.932916	1238.77692	-1.8356	-0.0007598	1.1537	0.00047756	-0.68186	-0.00028224	413.93335322974514	43.048	2.0933	43.048	42.061	44.154	0					130	51	3	0	0	0	0.7932	1	3040	3040		26.693	6.6961	1	494810	+		50368	26280	33821	33834	56845	56845					0.1670820114786693
RRARPLGSA	9	Unmodified	_RRARPLGSA_					0	0	0			REV__ENST00000531243.2_1_1:40041726-40042359:-|nuORF	REV__ENST00000531243.2_1_1:40041726-40042359:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.2951965332031	2	492.296499	982.578445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.432	1	73.472	72.972	73.972	0.040024								0	0	0	0.32159	1	7019	7019		23.042	1.0826	1		+		50369	26881	33822	33835	56846	56846					0.08645922725645505
RRARRPPL	8	Unmodified	_RRARRPPL_					0	0	0		nc|ENSG00000159314|Q6ZUM4-4|ARHGAP27	nc|ENSG00000159314|Q6ZUM4-4|ARHGAP27	nc|ENSG00000159314|Q6ZUM4-4|ARHGAP27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.326904296875	2	511.328134	1020.64171	-0.052165	-2.6674E-05	-1.937	-0.00099047	-1.9892	-0.0010171	511.3270422766062	97.471	2.3305	97.527	97.032	99.363	0.056839					141	53	4	0	0	0	0.81548	1	10270	10270		20.482	0	1	1704400			50370	15032	33823	33836	56847	56847					0.13221908233549584
RRASAARAPP	10	Unmodified	_RRASAARAPP_					0	0	0		ENST00000602479.5_1_2:181845146-181846756:+|nuORF;ENSG00000170035.16,UBE2E3,chr2,+,I3.1,180980974,180981035|12|18.41|1|intron	ENST00000602479.5_1_2:181845146-181846756:+|nuORF	ENST00000602479.5_1_2:181845146-181846756:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	527.3070068359375	2	526.807231	1051.59991	-1.5276	-0.00080476	-2.4473	-0.0012893	-3.975	-0.002094	526.8081287810614	99.219	1.531	99.405	98.808	100.34	0.18581					123	35	5	0	0	0	0.8651	1	10345	10345		25.574	2.5316	1	2548800			50371	6552	33824	33837	56848	56848					0.07617307754367175
RRATAALP	8	Unmodified	_RRATAALP_					0	0	0			REV__ENSG00000204335|ENST00000375281|SP5	REV__ENSG00000204335|ENST00000375281|SP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.26123046875	2	428.261594	854.508634	2.6338	0.001128	-2.64	-0.0011306	-0.0061786	-2.6461E-06	428.2603552628774	92.992	2.1642	93.038	92.582	94.746	0.045456					120	51	4	0	0	0	0.8347	1	9741	9741		23.042	0	1	945500	+		50372	23483	33825	33838	56849	56849					0.07556044057025701
RRATAALP	8	Unmodified	_RRATAALP_					0	0	0			REV__ENSG00000204335|ENST00000375281|SP5	REV__ENSG00000204335|ENST00000375281|SP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.2615051269531	2	428.261594	854.508634	-1.6655	-0.00071328	1.873	0.00080211	0.20742	8.8832E-05	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.87064	1	9222	9222		29.15	2.4566	1	44776000	+		50373	23483	33825	33838	56850	56850					0.07556044057025701
RRATAPTQ	8	Unmodified	_RRATAPTQ_					0	0	0		ENST00000431691.1_1_1:224918001-224918163:-|nuORF	ENST00000431691.1_1_1:224918001-224918163:-|nuORF	ENST00000431691.1_1_1:224918001-224918163:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7568664550781	2	450.754133	899.493713	0.36741	0.00016561	0.13246	5.9707E-05	0.49987	0.00022532	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.89679	1	8283	8283		37.812	0.65241	1	394230			50374	11652	33826	33839	56851	56851					0.03994552189033129
RRATPPAA	8	Unmodified	_RRATPPAA_					0	0	0			REV__ENSG00000181291|ENST00000631683|TMEM132E	REV__ENSG00000181291|ENST00000631683|TMEM132E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2445983886719	2	420.245944	838.477334	2.735	0.0011494	-2.6357	-0.0011076	0.099358	4.1755E-05	420.24477323908343	82.873	1.7732	82.932	82.163	83.936	0.059166					62	40	2	0	0	0	0.84341	1	8332	8332		24.203	2.2429	1	129400	+		50375	22452	33827	33840	56852	56852					0.051634710229222947
RRAVKEKHI	9	Unmodified	_RRAVKEKHI_					0	0	0			REV__nc|ENSG00000136754|Q8IZP0|ABI1	REV__nc|ENSG00000136754|Q8IZP0|ABI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.85400390625	2	568.854181	1135.69381	0.87008	0.00049495	-2.8282	-0.0016088	-1.9581	-0.0011139	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.7932	1	10949	10949		26.693	4.733	1	78933000	+		50376	29875	33828	33841	56853	56853					0.1313902685665198
RRAVPFLLHSL	11	Unmodified	_RRAVPFLLHSL_					0	0	0			REV__ENST00000396359.1_1_8:82193222-82195661:+|nuORF	REV__ENST00000396359.1_1_8:82193222-82195661:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.93408203125	3	436.934818	1307.78262	0.27454	0.00011996	-2.2259	-0.00097255	-1.9513	-0.00085259	436.9337888157145	20.681	2.5222	20.051	19.49	22.012	-0.62961					153	62	4	0	0	0	0.71803	1	685	685		28.577	6.0151	1	646260	+		50377	26140	33829	33842	56854	56854					0.141044420963226
RRCFFWRFMFY	11	Unmodified	_RRCFFWRFMFY_					0	0	0		ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR;nc|ENSG00000001626|P13569-3|CFTR	ENSG00000001626|ENST00000003084|CFTR	ENSG00000001626|ENST00000003084|CFTR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2952270507812	3	553.600564	1657.77986	-1.2054	-0.00066733	3.76	0.0020815	2.5546	0.0014142	553.6026653686148	72.141	0.6665	72.526	72.126	72.792	0.38582					24	15	2	0	0	0	0.18304	1	7997	7997		10.104	7.0779	1	146800			50378	650	33830	33843	56855	56855					-0.02271472624533999
RRCGARRPRLL	11	Unmodified	_RRCGARRPRLL_					0	0	0			REV__ENST00000591765.1_1_17:40834800-40835043:-|nuORF	REV__ENST00000591765.1_1_17:40834800-40835043:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.2811584472656	3	451.942201	1352.80477	-1.6861	-0.00076203	3.9764	0.0017971	2.2903	0.0010351	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.76579	1	4557	4557		18.531	0.69791	1	792670	+		50379	29202	33831	33844	56856	56856					0.14248343293093058
RRCGARRPRLL	11	Unmodified	_RRCGARRPRLL_					0	0	0			REV__ENST00000591765.1_1_17:40834800-40835043:-|nuORF	REV__ENST00000591765.1_1_17:40834800-40835043:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.94342041015625	3	451.942201	1352.80477	-1.2962	-0.0005858	3.3532	0.0015155	2.0571	0.00092967	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.74405	1	4272	4272		23.378	1.6922	1	734340	+		50380	29202	33831	33844	56857	56857					0.14248343293093058
RRCLLTRG	8	Carbamidomethyl (C)	_RRC(Carbamidomethyl (C))LLTRG_	RRC(1)LLTRG		RRC(50)LLTRG		0	1	0			REV__ENST00000578173.5_1_17:17991241-18001751:+|nuORF	REV__ENST00000578173.5_1_17:17991241-18001751:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.8006591796875	2	516.298185	1030.58182	0.13063	6.7444E-05	4.3677	0.002255	4.4983	0.0023225	516.3012953413697	57.209	1.6001	57.18	56.732	58.332	-0.028664					105	45	4	0	0	0	0.92973	1	5237	5237		50.025	7.5501	1	661070	+		50381	29020	33832	33845	56858	56858	351				0.06774849508019543
RRCWGRLWWHR	11	Unmodified	_RRCWGRLWWHR_					0	0	0			REV__ENST00000473038.5_1_1:46033610-46035625:+|nuORF	REV__ENST00000473038.5_1_1:46033610-46035625:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.9618530273438	3	537.949467	1610.82657	-0.87435	-0.00047036	-2.1599	-0.0011619	-3.0343	-0.0016323	537.9479742721995	54.47	0.58609	55.055	54.708	55.295	0.58474					21	13	3	0	0	0	0.18216	1	5577	5577		14.086	1.1285	1	127630	+		50382	27275	33833	33846	56859	56859					0.04559148041653316
RRCYLVVVV	9	Unmodified	_RRCYLVVVV_					0	0	0		ENST00000452622.1_1_7:562316-563757:+|nuORF	ENST00000452622.1_1_7:562316-563757:+|nuORF	ENST00000452622.1_1_7:562316-563757:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.830810546875	2	553.828786	1105.64302	1.287	0.00071279	1.2184	0.00067476	2.5054	0.0013876	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.7932	1	9504	9504		20.482	3.0138	1	5348100			50383	11923	33834	33847	56860	56860					0.09442361487435846
RRDAERLH	8	Unmodified	_RRDAERLH_					0	0	0			REV__ENST00000564948.1_1_16:57406535-57416157:+|nuORF	REV__ENST00000564948.1_1_16:57406535-57416157:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8078002929688	2	526.789038	1051.56352	1.7118	0.00090176	-3.0139	-0.0015877	-1.3021	-0.00068595	526.7869025545887	98.571	0.65833	98.948	98.49	99.149	0.37679					38	15	3	0	0	0	0.4196	1	11859	11859		73.975	13.003	1	234300	+		50384	24057	33835	33848	56861	56861					0.039804308576549374
RRDASILL	8	Unmodified	_RRDASILL_					0	0	0			REV__nc|ENSG00000204618|Q9H2S5-2|RNF39	REV__nc|ENSG00000204618|Q9H2S5-2|RNF39	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28802490234375	2	472.287808	942.561064	2.4783	0.0011705	-1.6779	-0.00079243	0.80042	0.00037803	472.28709322712206	99.355	1.7964	99.301	98.824	100.62	-0.053734					80	41	2	0	0	0	0.80706	1	10759	10759		19.36	0	1	447940	+		50385	30162	33836	33849	56862	56862					0.08748582400005489
RRDKRGPRPK	10	Unmodified	_RRDKRGPRPK_					0	0	0			REV__ENSG00000266524|ENST00000580279|GDF10	REV__ENSG00000266524|ENST00000580279|GDF10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5924072265625	3	422.593566	1264.75887	-1.7406	-0.00073557	-0.38953	-0.00016461	-2.1301	-0.00090018	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.86549	1	3877	3877		29.551	10.288	1	1126900	+		50386	23963	33837	33850	56863	56863					0.13708021382490188
RRDKRGPRPK	10	Unmodified	_RRDKRGPRPK_					0	0	0			REV__ENSG00000266524|ENST00000580279|GDF10	REV__ENSG00000266524|ENST00000580279|GDF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5930480957031	3	422.593566	1264.75887	-0.12961	-5.4774E-05	-0.95032	-0.0004016	-1.0799	-0.00045637	422.59301325163335	54.438	1.5298	54.43	53.553	55.082	-0.0077057					142	48	4	0	0	0	0.85285	1	4865	4865		16.717	0.18753	1	1173800	+		50387	23963	33837	33850	56864	56864					0.13708021382490188
RRDLLNSA	8	Unmodified	_RRDLLNSA_					0	0	0		nc|ENSG00000180767|Q8NET6-2|CHST13;ENSG00000180767|ENST00000319340|CHST13	nc|ENSG00000180767|Q8NET6-2|CHST13	nc|ENSG00000180767|Q8NET6-2|CHST13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7681579589844	2	472.76724	943.519927	-1.568	-0.00074129	1.5546	0.00073498	-0.013349	-6.3108E-06	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.89962	1	7958	7958		38.806	3.1879	1	404330			50388	7344	33838	33851	56865	56865					0.045908213605116543
RRDLLTGN	8	Unmodified	_RRDLLTGN_					0	0	0			REV__ENSG00000160161|ENST00000291495|CILP2	REV__ENSG00000160161|ENST00000291495|CILP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.76727294921875	2	472.76724	943.519927	-1.1355	-0.00053681	1.1341	0.00053614	-0.0014011	-6.6241E-07	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.8347	1	8048	8048		23.042	2.5607	1	292450	+		50389	20696	33839	33852	56866	56866					0.045908213605116543
RRDLLTGN	8	Unmodified	_RRDLLTGN_					0	0	0			REV__ENSG00000160161|ENST00000291495|CILP2	REV__ENSG00000160161|ENST00000291495|CILP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7674255371094	2	472.76724	943.519927	0.62555	0.00029574	-0.6042	-0.00028565	0.02135	1.0094E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.8347	1	8012	8012		23.042	1.0826	1	508030	+		50390	20696	33839	33852	56867	56867					0.045908213605116543
RRDPAQFPQPV	11	Unmodified	_RRDPAQFPQPV_					0	0	0			REV__ENST00000337273.9_1_5:72112397-72144275:+|nuORF	REV__ENST00000337273.9_1_5:72112397-72144275:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.9044189453125	3	437.570316	1309.68912	-0.1105	-4.835E-05	-0.22068	-9.6562E-05	-0.33117	-0.00014491	437.5698703487814	34.695	0.63161	34.691	34.376	35.008	-0.0047417					34	16	3	0	0	0	0.72374	1	2112	2112		27.644	2.5179	1	62620	+		50391	25204	33840	33853	56868	56868					0.04666097923200141
RRDPGKAI	8	Unmodified	_RRDPGKAI_					0	0	0		ENST00000506326.1_1_3:134076549-134085275:-|nuORF;nc|ENSG00000114019|Q9Y2J4-3|AMOTL2;nc|ENSG00000114019|Q9Y2J4|AMOTL2;ENSG00000114019|ENST00000249883|AMOTL2;nc|ENSG00000114019|Q9Y2J4-4|AMOTL2	ENST00000506326.1_1_3:134076549-134085275:-|nuORF	ENST00000506326.1_1_3:134076549-134085275:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7725830078125	2	456.772326	911.530098	0.92134	0.00042084	-0.6003	-0.0002742	0.32104	0.00014664	456.77176380852353	89.91	2.1934	89.958	88.794	90.987	0.048164					112	51	4	0	0	0	0.87922	1	9333	9333		31.955	2.8053	1	1119200			50392	2757	33841	33854	56869	56869					0.07079429085752054
RRDRSEQY	8	Unmodified	_RRDRSEQY_					0	0	0			REV__chr2:216498883-216499270|23|116.26|0.24|8.9|+|2|None,RPL37A|1	REV__chr2:216498883-216499270|23|116.26|0.24|8.9|+|2|None,RPL37A|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.2747802734375	2	555.275961	1108.53737	-0.45643	-0.00025344	1.8326	0.0010176	1.3762	0.00076418	555.2767135687351	41.67	0.44784	41.639	41.421	41.868	-0.030991					26	10	3	0	0	0	0.47906	1	3046	3046		76.847	1.8033	1	427350	+		50393	15751	33842	33855	56870	56870					-0.012558831044771068
RRDRSLPR	8	Unmodified	_RRDRSLPR_					0	0	0		nc|ENSG00000197415|Q14D04-2|VEPH1;ENSG00000197415|ENST00000362010|VEPH1	nc|ENSG00000197415|Q14D04-2|VEPH1	nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3125610351562	2	528.312681	1054.61081	-1.5228	-0.00080452	4.4856	0.0023698	2.9628	0.0015653	528.3151474868954	98.282	1.1905	98.478	97.935	99.126	0.19585					48	26	2	0	0	0	0.89494	1	10139	10139		37.159	2.0071	1	327210			50394	8163	33843	33856	56871	56871					0.08568710128656676
RRDVKAKKF	9	Unmodified	_RRDVKAKKF_					0	0	0			REV__ENST00000375433.3_1_1:17735459-17735531:-|nuORF	REV__ENST00000375433.3_1_1:17735459-17735531:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3576049804688	2	574.356557	1146.69856	-1.0357	-0.00059487	-0.061954	-3.5583E-05	-1.0977	-0.00063045	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.7932	1	10591	10591		23.042	3.0457	1	715310	+		50395	25814	33844	33857	56872	56872					0.13107910999406158
RREAPCLC	8	Unmodified	_RREAPCLC_					0	0	0		ENST00000466411.1_1_7:73241946-73243545:+|nuORF	ENST00000466411.1_1_7:73241946-73243545:+|nuORF	ENST00000466411.1_1_7:73241946-73243545:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	474.23516845703125	2	474.231122	946.44769	0.22726	0.00010777	2.5436	0.0012063	2.7709	0.001314	474.2322593295761	39.717	0.74911	39.806	39.489	40.238	0.088371					29	18	2	0	0	0	0.86288	1	2460	2460		26.796	0	1	187640			50396	12134	33845	33858	56873	56873					-0.02767552309057919
RRECDQYVIL	10	Unmodified	_RRECDQYVIL_					0	0	0			REV__nc|ENSG00000217128|Q8TF40-3|FNIP1	REV__nc|ENSG00000217128|Q8TF40-3|FNIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.22222900390625	3	432.223928	1293.64996	-0.91805	-0.0003968	-3.2198	-0.0013917	-4.1379	-0.0017885	432.22274537935755	39.23	1.8544	39.785	38.985	40.839	0.55449					124	43	5	0	0	0	0.28217	1	3319	3319		66.962	30.434	1	2725200	+		50397	23697	33846	33859	56874	56874					0.014876295773319725
RREKALAS	8	Unmodified	_RREKALAS_					0	0	0			REV__ENST00000587044.1_1_17:41568567-41594747:+|nuORF	REV__ENST00000587044.1_1_17:41568567-41594747:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77752685546875	2	465.777608	929.540663	0.60386	0.00028126	-0.75167	-0.00035011	-0.14781	-6.8848E-05	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.87479	1	7909	7909		30.504	0	1	1082300	+		50398	16545	33847	33860	56875	56875					0.07307411740180214
RREKGIYY	8	Unmodified	_RREKGIYY_					0	0	0			REV__nc|ENSG00000134545|P26715-2|KLRC1	REV__nc|ENSG00000134545|P26715-2|KLRC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.3014526367188	2	542.79854	1083.58253	1.2343	0.00066999	1.0622	0.00057658	2.2966	0.0012466	542.7991222400209	103.47	1.0718	103.7	103.42	104.49	0.22556					41	25	2	0	0	0	0.92973	1	12623	12623		50.025	0	1	542050	+		50399	19150	33848	33861	56876	56876					0.04407967428710435
RRELNLGS	8	Unmodified	_RRELNLGS_					0	0	0		ENST00000225296.7_1_17:5365805-5366877:-|nuORF	ENST00000225296.7_1_17:5365805-5366877:-|nuORF	ENST00000225296.7_1_17:5365805-5366877:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7691955566406	2	472.76724	943.519927	-1.4813	-0.00070033	1.1453	0.00054148	-0.33599	-0.00015885	472.76778971214105	81.58	2.2284	81.694	80.507	82.735	0.11426					112	53	4	0	0	0	0.91977	1	7694	7694		45.952	7.1458	1	160160			50400	9185	33849	33862	56877	56877					0.04590821360523023
RRELPRIITG	10	Unmodified	_RRELPRIITG_					0	0	0		nc|ENSG00000196440|Q5H9R4-3|ARMCX4;nc|ENSG00000196440|Q5H9R4-2|ARMCX4	nc|ENSG00000196440|Q5H9R4-3|ARMCX4	nc|ENSG00000196440|Q5H9R4-3|ARMCX4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.8731689453125	2	605.872571	1209.73059	2.1215	0.0012854	-2.3851	-0.001445	-0.26355	-0.00015968	605.870912508801	99.925	1.6378	100.29	99.878	101.52	0.36292					110	40	4	0	0	0	0.85834	1	12196	12196		22.58	0.61977	1	1159400			50401	15183	33850	33863	56878	56878					0.13411278682542616
RREPLAAQ	8	Unmodified	_RREPLAAQ_					0	0	0			REV__chr16:31202312-31202417|38|10.74|0.56|4.27|-|2|None,PYCARD|1	REV__chr16:31202312-31202417|38|10.74|0.56|4.27|-|2|None,PYCARD|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.769287109375	2	470.769783	939.525013	-0.65478	-0.00030825	-0.88303	-0.00041571	-1.5378	-0.00072396	470.7692226833795	80.078	1.5697	80.605	79.423	80.992	0.52676					81	36	3	0	0	0	0.90837	1	9242	9242		56.721	1.9447	1	1102700	+		50402	15632	33851	33864	56879	56879					0.052831252231385406
RREPLKAS	8	Unmodified	_RREPLKAS_					0	0	0		ENSG00000112624|ENST00000314073|BICRAL	ENSG00000112624|ENST00000314073|BICRAL	ENSG00000112624|ENST00000314073|BICRAL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.7857360839844	2	478.785433	955.556313	-0.42495	-0.00020346	0.6385	0.0003057	0.21355	0.00010224	478.78545742505617	92.153	2.1454	92.198	91.261	93.406	0.045448					108	50	4	0	0	0	0.85277	1	9669	9669		25.45	2.4077	1	799270			50403	2673	33852	33865	56880	56880					0.07675698257230579
RRERAPAAGKR	11	Unmodified	_RRERAPAAGKR_					0	0	0			REV__ENST00000536219.5_1_12:64173626-64178865:+|nuORF	REV__ENST00000536219.5_1_12:64173626-64178865:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3770141601562	2	634.376343	1266.73813	2.2049	0.0013987	-1.0868	-0.00068946	1.1181	0.00070928	634.375598285312	112.22	1.4492	112.25	112.06	113.51	0.030602					90	61	2	0	0	0	0.73893	1	13556	13556		24.519	0	1	7800800	+		50404	18324	33853	33866	56881	56881					0.11543431002814941
RRERDFRRRRQ	11	Unmodified	_RRERDFRRRRQ_					0	0	0		ENST00000488868.1_1_1:28559432-28559522:-|nuORF	ENST00000488868.1_1_1:28559432-28559522:-|nuORF	ENST00000488868.1_1_1:28559432-28559522:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	544.3328247070312	3	544.312233	1629.91487	0.82532	0.00044923	-4.1671	-0.0022682	-3.3418	-0.001819	544.6442223018148	98.319	0.93016	98.48	98.148	99.078	0.16073					26	20	2	0	0	0	0.18191	1	10184	10184		10.104	4.9615	1	68669			50405	12640	33854	33867	56882	56882					0.12510859885787795
RRERILRALPR	11	Unmodified	_RRERILRALPR_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|43|2|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|43|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3088684082031	3	479.307537	1434.90078	-0.26649	-0.00012773	3.4758	0.001666	3.2093	0.0015382	479.3090579994434	48.153	0.74601	48.059	47.737	48.483	-0.093182					32	18	2	0	0	0	0.79224	1	3660	3660		12.957	0	1	164470	+		50406	29613	33855	33868	56883	56883					0.20072814404829842
RRETDPRQAQ	10	Unmodified	_RRETDPRQAQ_					0	0	0			REV__ENST00000394456.9_1_19:6393018-6393183:-|nuORF	REV__ENST00000394456.9_1_19:6393018-6393183:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	628.945556640625	2	628.826349	1255.63815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.973	1	52.014	51.514	52.514	0.040592								0	0	0	0.45132	1	4169	4169		30.318	1.1682	1		+		50407	26081	33856	33869	56884	56884					0.020551488783667082
RRETKPGL	8	Unmodified	_RRETKPGL_					0	0	0		ENST00000515152.1_1_4:185570945-185573203:+|nuORF	ENST00000515152.1_1_4:185570945-185573203:+|nuORF	ENST00000515152.1_1_4:185570945-185573203:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.78564453125	2	478.785433	955.556313	1.6863	0.00080739	-2.1808	-0.0010441	-0.49447	-0.00023675	478.78443593268145	92.331	1.6378	92.266	91.688	93.326	-0.06414					85	38	3	0	0	0	0.87064	2	9745	9745;9757		40.573	3.6994	1	793300			50408	13075	33857	33870	56885;56886	56885					0.07675698257230579
RREVNPIK	8	Unmodified	_RREVNPIK_					0	0	0			REV__nc|ENSG00000126012|P41229-2|KDM5C	REV__nc|ENSG00000126012|P41229-2|KDM5C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.28631591796875	2	506.306532	1010.59851	0.42607	0.00021572	4.0115	0.0020311	4.4376	0.0022468	506.30890839599186	53.897	1.2981	54.481	54.123	55.421	0.58474					44	30	2	0	0	0	0.4196	1	5524	5524		85.359	27.548	1	218780	+		50409	18692	33858	33871	56887	56887					0.0936367366560944
RRFGLVGAR	9	Unmodified	_RRFGLVGAR_					0	0	0			REV__ENST00000409185.5_1_2:131807576-131807882:-|nuORF	REV__ENST00000409185.5_1_2:131807576-131807882:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3148193359375	2	516.314692	1030.61483	1.9037	0.0009829	-3.2283	-0.0016668	-1.3246	-0.0006839	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.77546	1	12078	12078		31.955	11.008	1	22616000	+		50410	26339	33859	33872	56888	56888					0.10074799622361752
RRFGQGPF	8	Unmodified	_RRFGQGPF_					0	0	0		nc|ENSG00000110723|Q8NEV8-2|EXPH5;ENSG00000110723|ENST00000265843|EXPH5	nc|ENSG00000110723|Q8NEV8-2|EXPH5	nc|ENSG00000110723|Q8NEV8-2|EXPH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	482.7578125	2	482.759218	963.503883	-1.0267	-0.00049566	-1.2782	-0.00061705	-2.3049	-0.0011127	482.75837439873857	43.364	0.60559	43.329	43.015	43.62	-0.03582					23	13	2	0	0	0	0.89457	1	3398	3398		37.028	1.8765	1	157120			50411	2538	33860	33873	56889	56889					0.020671599142929153
RRFGQGPF	8	Unmodified	_RRFGQGPF_					0	0	0		nc|ENSG00000110723|Q8NEV8-2|EXPH5;ENSG00000110723|ENST00000265843|EXPH5	nc|ENSG00000110723|Q8NEV8-2|EXPH5	nc|ENSG00000110723|Q8NEV8-2|EXPH5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	482.759218	963.503883	0.27794	0.00013418	-2.5111	-0.0012123	-2.2332	-0.0010781	482.7577517737143	43.393	0.54698	43.366	43.1	43.647	-0.026764	0.018	-0.0011873	NaN	37.028	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147070			50412	2538	33860	33873							0.020671599142929153
RRFGQGPF	8	Unmodified	_RRFGQGPF_					0	0	0		nc|ENSG00000110723|Q8NEV8-2|EXPH5;ENSG00000110723|ENST00000265843|EXPH5	nc|ENSG00000110723|Q8NEV8-2|EXPH5	nc|ENSG00000110723|Q8NEV8-2|EXPH5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	482.759218	963.503883	-2.2065	-0.0010652	-0.34082	-0.00016453	-2.5473	-0.0012297	482.75883007001926	43.35	0.67679	43.35	43.067	43.744	0.00016785	0.0016101	0.00090816	NaN	37.028	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	175950			50413	2538	33860	33873							0.020671599142929153
RRFHVVVSA	9	Unmodified	_RRFHVVVSA_					0	0	0		ENST00000526852.5_1_11:10879166-10879364:-|nuORF	ENST00000526852.5_1_11:10879166-10879364:-|nuORF	ENST00000526852.5_1_11:10879166-10879364:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	535.8140869140625	2	535.814525	1069.6145	1.245	0.00066711	4.3092	0.0023089	5.5542	0.002976	535.8171123630409	99.147	1.5743	99.195	98.765	100.34	0.047523					65	36	3	0	0	0	0.78983	1	10616	10616		27.882	1.1893	1	436170			50414	13270	33861	33874	56890	56890					0.08247379902513785
RRFIFILIHMY	11	Unmodified	_RRFIFILIHMY_					0	0	0		ENST00000302550.15_1_1:244869869-244869953:+|nuORF	ENST00000302550.15_1_1:244869869-244869953:+|nuORF	ENST00000302550.15_1_1:244869869-244869953:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	503.8709411621094	3	503.623475	1507.8486	-1.3022	-0.00065581	4.1868	0.0021086	2.8846	0.0014528	503.62572614552	61.705	0.34492	61.705	61.658	62.003	0					18	15	2	0	0	0	0.18191	1	5416	5416		6.3209	0	1	868930			50415	9823	33862	33875	56891	56891					0.11498514946879368
RRFKRIFITS	10	Unmodified	_RRFKRIFITS_					0	0	0		ENST00000261254.7_1_12:4413568-4413715:+|nuORF	ENST00000261254.7_1_12:4413568-4413715:+|nuORF	ENST00000261254.7_1_12:4413568-4413715:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.939697265625	3	441.938451	1322.79352	0.63201	0.00027931	2.4685	0.0010909	3.1005	0.0013702	441.93938161315157	55.264	1.2271	55.292	54.682	55.909	0.027142					77	31	3	0	0	0	0.8583	1	4969	4969		22.562	4.0305	1	422510			50416	9404	33863	33876	56892	56892					0.1450384447059605
RRFLIHKFSRR	11	Unmodified	_RRFLIHKFSRR_					0	0	0			REV__ENSG00000184160|ENST00000330055|ADRA2C	REV__ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.973876953125	3	505.975899	1514.90587	0.14933	7.5555E-05	-3.3299	-0.0016849	-3.1806	-0.0016093	505.97413818936155	107.88	0.86302	107.92	107.11	107.97	0.035622					68	20	5	0	0	0	0.74405	1	11855	11855		23.378	7.4573	1	155850000	+		50417	22648	33864	33877	56893	56893					0.1690111826744669
RRFLIHKFSRR	11	Unmodified	_RRFLIHKFSRR_					0	0	0			REV__ENSG00000184160|ENST00000330055|ADRA2C	REV__ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.973876953125	3	505.975899	1514.90587	-0.4082	-0.00020654	-3.5291	-0.0017856	-3.9373	-0.0019922	505.9740917218288	107.84	1.5629	107.98	106.51	108.07	0.13866					111	38	5	0	0	0	0.79224	1	11595	11595		12.957	4.1582	1	368330000	+		50418	22648	33864	33877	56894	56894					0.1690111826744669
RRFLIHKFSRR	11	Unmodified	_RRFLIHKFSRR_					0	0	0			REV__ENSG00000184160|ENST00000330055|ADRA2C	REV__ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3114318847656	3	505.975899	1514.90587	-0.41057	-0.00020774	-2.4615	-0.0012455	-2.8721	-0.0014532	505.97459235026696	110.27	1.4737	110.39	110.04	111.52	0.11658					107	54	3	0	0	0	0.77511	1	11858	11858		16.53	10.529	1	898710	+		50419	22648	33864	33877	56895	56895					0.1690111826744669
RRFLIHKFSRR	11	Unmodified	_RRFLIHKFSRR_					0	0	0			REV__ENSG00000184160|ENST00000330055|ADRA2C	REV__ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	505.97442626953125	3	505.975899	1514.90587	0.80871	0.00040919	-4.1071	-0.0020781	-3.2984	-0.0016689	505.9737719124194	107.88	0.78265	107.96	107.26	108.04	0.084412					73	19	5	0	0	0	0.76892	1	11602	11602		17.833	3.7471	1	330640000	+		50420	22648	33864	33877	56896	56896					0.1690111826744669
RRFLIHKFSRR	11	Unmodified	_RRFLIHKFSRR_					0	0	0			REV__ENSG00000184160|ENST00000330055|ADRA2C	REV__ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	505.975899	1514.90587	-0.057002	-2.8841E-05	-2.0108	-0.0010174	-2.0678	-0.0010463	506.30954896901017	110.62	0.6223	110.56	110.04	110.66	-0.055084	0.061155	0.00093571	NaN	16.53	32	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130540	+		50421	22648	33864	33877							0.1690111826744669
RRFLIHKFSRR	11	Unmodified	_RRFLIHKFSRR_					0	0	0			REV__ENSG00000184160|ENST00000330055|ADRA2C	REV__ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	505.975899	1514.90587	2.9412	0.0014882	-5.711	-0.0028896	-2.7698	-0.0014015	506.3074257708912	110.57	1.8745	110.54	110.12	111.99	-0.027634	0.037718	-0.004681	NaN	16.53	89	62	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162790	+		50422	22648	33864	33877							0.1690111826744669
RRFLIHKFSRR	11	Unmodified	_RRFLIHKFSRR_					0	0	0			REV__ENSG00000184160|ENST00000330055|ADRA2C	REV__ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	505.975899	1514.90587	0.1371	6.937E-05	-2.7786	-0.0014059	-2.6415	-0.0013365	505.9744928559483	110.55	1.009	110.58	110.32	111.33	0.031746	0.083412	-0.00022976	NaN	16.53	51	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133010	+		50423	22648	33864	33877							0.1690111826744669
RRFLIHKFSRR	11	Unmodified	_RRFLIHKFSRR_					0	0	0			REV__ENSG00000184160|ENST00000330055|ADRA2C	REV__ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	505.975899	1514.90587	-1.5955	-0.00080729	-1.1443	-0.00057901	-2.7399	-0.0013863	506.30989131562126	110.44	1.0733	110.43	110.16	111.23	-0.0074387	-0.072401	0.0022509	NaN	16.53	80	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	244240	+		50424	22648	33864	33877							0.1690111826744669
RRFLLRRKFI	10	Unmodified	_RRFLLRRKFI_					0	0	0		nc|ENSG00000095303|P23219-4|PTGS1;nc|ENSG00000095303|P23219-3|PTGS1;nc|ENSG00000095303|P23219-2|PTGS1;ENSG00000095303|ENST00000362012|PTGS1;nc|ENSG00000095303|P23219-6|PTGS1;nc|ENSG00000095303|P23219-5|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.97113037109375	3	468.973607	1403.89899	-1.6686	-0.00078252	-3.8782	-0.0018188	-5.5468	-0.0026013	468.9716486739128	48.981	2.0478	48.981	48.288	50.336	0					141	48	4	0	0	0	0.8573	1	3827	3827		16.007	6.795	1	552830			50425	1720	33865	33878	56897	56897					0.21319805386883672
RRFLLRRKFI	10	Unmodified	_RRFLLRRKFI_					0	0	0		nc|ENSG00000095303|P23219-4|PTGS1;nc|ENSG00000095303|P23219-3|PTGS1;nc|ENSG00000095303|P23219-2|PTGS1;ENSG00000095303|ENST00000362012|PTGS1;nc|ENSG00000095303|P23219-6|PTGS1;nc|ENSG00000095303|P23219-5|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.3067626953125	3	468.973607	1403.89899	-1.0505	-0.00049264	-4.4583	-0.0020908	-5.5088	-0.0025835	468.97139201096996	48.715	1.6673	48.738	48.193	49.86	0.022274					129	42	5	0	0	0	0.89119	1	3694	3694		10.587	2.9074	1	766650			50426	1720	33865	33878	56898	56898					0.21319805386883672
RRFLRPPTRP	10	Unmodified	_RRFLRPPTRP_					0	0	0		ENST00000264377.7_1_2:207308583-207310043:+|nuORF	ENST00000264377.7_1_2:207308583-207310043:+|nuORF	ENST00000264377.7_1_2:207308583-207310043:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3951416015625	2	648.394005	1294.77346	-1.1411	-0.00073988	-1.4026	-0.00090944	-2.5437	-0.0016493	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.86348	1	12478	12478		31.53	2.3598	1	2297700			50427	9478	33866	33879	56899	56899					0.13786093530643484
RRFLTLSRFI	10	Unmodified	_RRFLTLSRFI_					0	0	0			REV__ENST00000436909.7_1_16:50263252-50263345:+|nuORF	REV__ENST00000436909.7_1_16:50263252-50263345:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.9327697753906	3	436.934818	1307.78262	-1.6383	-0.00071584	-0.5148	-0.00022494	-2.1531	-0.00094078	436.9346037105034	19.468	0.84112	19.511	19.233	20.074	0.043749					87	41	3	0	0	0	0.85086	1	424	424		19.263	0	1	80011	+		50428	26699	33867	33880	56900	56900					0.14104442096299863
RRFLTLSRFI	10	Unmodified	_RRFLTLSRFI_					0	0	0			REV__ENST00000436909.7_1_16:50263252-50263345:+|nuORF	REV__ENST00000436909.7_1_16:50263252-50263345:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	436.934818	1307.78262	-1.6383	-0.00071584	-0.5148	-0.00022494	-2.1531	-0.00094078	436.9346037105034	19.468	0.84112	19.511	19.233	20.074	0.043749	0.11772	0.0018054	NaN	19.263	87	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80011	+		50429	26699	33867	33880							0.14104442096299863
RRFLTLSRFI	10	Unmodified	_RRFLTLSRFI_					0	0	0			REV__ENST00000436909.7_1_16:50263252-50263345:+|nuORF	REV__ENST00000436909.7_1_16:50263252-50263345:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	436.934818	1307.78262	0.016318	7.1298E-06	-2.1875	-0.00095579	-2.1712	-0.00094866	436.9339437902983	19.249	0.83375	19.32	18.947	19.78	0.070713	-0.073668	-0.00038716	NaN	19.263	92	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130810	+		50430	26699	33867	33880							0.14104442096299863
RRFLTLSRFI	10	Unmodified	_RRFLTLSRFI_					0	0	0			REV__ENST00000436909.7_1_16:50263252-50263345:+|nuORF	REV__ENST00000436909.7_1_16:50263252-50263345:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	436.934818	1307.78262	0.56838	0.00024835	-2.9518	-0.0012897	-2.3834	-0.0010414	436.9336391638184	19.373	0.84713	19.35	18.959	19.806	-0.023342	-0.044056	-0.001389	NaN	19.263	81	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91554	+		50431	26699	33867	33880							0.14104442096299863
RRFRKFLVF	9	Unmodified	_RRFRKFLVF_					0	0	0		ENST00000491154.1_1_X:153666748-153668487:+|nuORF;ENSG00000203879|ENST00000447750|GDI1	ENST00000491154.1_1_X:153666748-153668487:+|nuORF	ENST00000491154.1_1_X:153666748-153668487:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	423.59808349609375	3	423.596137	1267.76658	2.7179	0.0011513	0.81884	0.00034686	3.5368	0.0014982	423.5963997730453	105.86	2.6165	105.82	105.15	107.76	-0.037148					224	61	5	0	0	0	0.77546	1	11790	11790		31.53	14.363	1	6994400			50432	8399	33868	33881	56901	56901					0.1434078065005906
RRFRKFLVF	9	Unmodified	_RRFRKFLVF_					0	0	0		ENST00000491154.1_1_X:153666748-153668487:+|nuORF;ENSG00000203879|ENST00000447750|GDI1	ENST00000491154.1_1_X:153666748-153668487:+|nuORF	ENST00000491154.1_1_X:153666748-153668487:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5976257324219	3	423.596137	1267.76658	2.8995	0.0012282	0.66086	0.00027994	3.5603	0.0015081	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.7932	1	11551	11551		25.574	9.5673	1	6928400			50433	8399	33868	33881	56902	56902					0.1434078065005906
RRFRRERRQRR	11	Unmodified	_RRFRRERRQRR_					0	0	0			REV__nc|ENSG00000204498|Q9UBC1-2|NFKBIL1	REV__nc|ENSG00000204498|Q9UBC1-2|NFKBIL1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	558.006591796875	3	558.003622	1670.98904	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.349	1	60.45	59.95	60.95	0.10082								0	0	0	0.56276	1	5216	5216		6.3209	4.9021	1		+		50434	23499	33869	33882	56903	56903					0.18038247767981375
RRFVGHTKDV	10	Unmodified	_RRFVGHTKDV_					0	0	0		ENST00000502890.5_1_5:180667315-180668686:-|nuORF;ENST00000507261.1_1_5:180668485-180669312:-|nuORF;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF;ENSG00000204628|ENST00000512805|RACK1	ENST00000502890.5_1_5:180667315-180668686:-|nuORF	ENST00000502890.5_1_5:180667315-180668686:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.56500244140625	3	405.563273	1213.66799	-0.18878	-7.6562E-05	3.952	0.0016028	3.7632	0.0015262	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.86763	1	5871	5871		31.634	5.7426	1	257140			50435	8471	33870	33883	56904	56904					0.06970132614378599
RRFWESWSGDY	11	Unmodified	_RRFWESWSGDY_					0	0	0			REV__ENSG00000128311|ENST00000249042|TST	REV__ENSG00000128311|ENST00000249042|TST	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.83648681640625	3	496.893347	1487.65821	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.721	1	23.721	23.221	24.221	0								0	0	0	0.56276	1	758	758		24.232	6.3987	1		+		50436	18769	33871	33884	56905	56905					-0.0661110018168074
RRGAAGQP	8	Unmodified	_RRGAAGQP_					0	0	0			REV__nc|ENSG00000233220|Q96N53|PRDM10-DT	REV__nc|ENSG00000233220|Q96N53|PRDM10-DT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7284851074219	2	406.727918	811.441283	-0.18786	-7.6407E-05	0.54475	0.00022157	0.3569	0.00014516	406.7280690694445	76.123	2.0682	76.173	74.921	76.99	0.049194					93	66	2	0	0	0	0.86288	1	7325	7325		26.796	3.7594	1	123610	+		50437	30222	33872	33885	56906	56906					0.028020138460874477
RRGAAGQP	8	Unmodified	_RRGAAGQP_					0	0	0			REV__nc|ENSG00000233220|Q96N53|PRDM10-DT	REV__nc|ENSG00000233220|Q96N53|PRDM10-DT	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.728515625	2	406.727918	811.441283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.933	1	75.979	75.479	76.479	0.046448								0	0	0	0.30784	1	7405	7405		14.664	0	1		+		50438	30222	33872	33885	56907	56907					0.028020138460874477
RRGAPPSPPAS	11	Unmodified	_RRGAPPSPPAS_					0	0	0			REV__nc|ENSG00000099869|Q6U949|IGF2-AS	REV__nc|ENSG00000099869|Q6U949|IGF2-AS	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.8400268554688	2	546.799072	1091.58359	0.1927	0.00010537	0.058974	3.2247E-05	0.25167	0.00013762	546.7989534268673	100.93	0.28054	101.13	101.04	101.32	0.2058					11	6	2	0	0	0	0.15819	1	10573	10573		69.628	7.5202	1	137190	+		50439	29735	33873	33886	56908	56908					0.0414618179761419
RRGAPRLLPG	10	Unmodified	_RRGAPRLLPG_					0	0	0			REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	REV__nc|ENSG00000075275|Q9NYQ6|CELSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.840087890625	2	546.841074	1091.66759	-0.41161	-0.00022509	-2.2056	-0.0012061	-2.6172	-0.0014312	546.8400747085221	101.16	3.89	101.19	100.52	104.41	0.031036					283	93	6	0	0	0	0.8608	1	10851	10851		34.173	5.023	1	40007000	+		50440	16706	33874	33887	56909	56909					0.12542757685173456
RRGARARTG	9	Unmodified	_RRGARARTG_					0	0	0		ENST00000563983.5_1_16:89788975-89789592:+|nuORF	ENST00000563983.5_1_16:89788975-89789592:+|nuORF	ENST00000563983.5_1_16:89788975-89789592:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.79815673828125	2	500.797198	999.579842	-0.065162	-3.2633E-05	0.98359	0.00049258	0.91842	0.00045994	500.79757326318753	94.542	1.5024	94.611	94.008	95.511	0.068344					48	35	2	0	0	0	0.78983	2	9865	9865;9871		27.882	1.0861	1	553460			50441	13878	33875	33888	56910;56911	56910					0.08003556814412605
RRGARARTG	9	Unmodified	_RRGARARTG_					0	0	0		ENST00000563983.5_1_16:89788975-89789592:+|nuORF	ENST00000563983.5_1_16:89788975-89789592:+|nuORF	ENST00000563983.5_1_16:89788975-89789592:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.7969970703125	2	500.797198	999.579842	1.9771	0.00099014	-1.2764	-0.00063924	0.70069	0.0003509	500.7965407975563	94.521	2.0547	94.462	93.331	95.386	-0.059204					67	48	2	0	0	0	0.7932	1	10081	10081		26.693	1.1189	1	517310			50442	13878	33875	33888	56912	56912					0.08003556814412605
RRGARARTG	9	Unmodified	_RRGARARTG_					0	0	0		ENST00000563983.5_1_16:89788975-89789592:+|nuORF	ENST00000563983.5_1_16:89788975-89789592:+|nuORF	ENST00000563983.5_1_16:89788975-89789592:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.79754638671875	2	500.797198	999.579842	-0.20548	-0.00010291	3.6166	0.0018112	3.4112	0.0017083	500.79776973299846	94.355	2.1278	94.402	93.492	95.62	0.046173					87	50	4	0	0	0	0.78536	1	9938	9938		29.15	0	1	522090			50443	13878	33875	33888	56913	56913					0.08003556814412605
RRGATPPA	8	Unmodified	_RRGATPPA_					0	0	0		ENSG00000141858|ENST00000533683|SAMD1;nc|ENSG00000141858|Q6SPF0|SAMD1	ENSG00000141858|ENST00000533683|SAMD1	ENSG00000141858|ENST00000533683|SAMD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2370910644531	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.86288	1	6961	6961		26.796	1.3459	1	1692300			50444	4531	33876	33889	56914	56914					0.04243184505901354
RRGCHATRLGA	11	Unmodified	_RRGCHATRLGA_					0	0	0			REV__ENST00000228606.8_1_12:58158304-58160873:-|nuORF	REV__ENST00000228606.8_1_12:58158304-58160873:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3223266601562	2	599.322722	1196.63089	0.89729	0.00053777	-1.5448	-0.00092583	-0.6475	-0.00038806	599.3217573684728	59.535	0.63619	59.629	59.325	59.962	0.094059					36	17	3	0	0	0	0.58425	1	5124	5124		45.972	0	1	201970	+		50445	24186	33877	33890	56915	56915					0.040441377969500536
RRGEFGAFVA	10	Unmodified	_RRGEFGAFVA_					0	0	0			REV__nc|ENSG00000005302|Q8N5Y2-4|MSL3	REV__nc|ENSG00000005302|Q8N5Y2-4|MSL3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7796020507812	2	555.296165	1108.57778	0.29814	0.00016556	-0.66292	-0.00036812	-0.36477	-0.00020256	555.2983572964426	64.215	0.77882	64.18	63.625	64.404	-0.034256					40	22	3	0	0	0	0.37624	1	6114	6114		47.657	23.455	1	88190	+		50446	16083	33878	33891	56916	56916					0.02783083285930843
RRGELKKLH	9	Unmodified	_RRGELKKLH_					0	0	0			REV__nc|ENSG00000140600|Q99963-2|SH3GL3	REV__nc|ENSG00000140600|Q99963-2|SH3GL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8532104492188	2	568.854181	1135.69381	0.52259	0.00029728	-2.4856	-0.0014139	-1.963	-0.0011166	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.74721	1	10740	10740		37.159	6.6555	1	84800000	+		50447	17655	33879	33892	56917	56917					0.1313902685665198
RRGELKKLH	9	Unmodified	_RRGELKKLH_					0	0	0			REV__nc|ENSG00000140600|Q99963-2|SH3GL3	REV__nc|ENSG00000140600|Q99963-2|SH3GL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8541870117188	2	568.854181	1135.69381	0.87008	0.00049495	-2.8282	-0.0016088	-1.9581	-0.0011139	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.78536	2	10924	10804;10924		29.15	2.3535	1	78933000	+		50448	17655	33879	33892	56918;56919	56919					0.1313902685665198
RRGELKKLH	9	Unmodified	_RRGELKKLH_					0	0	0			REV__nc|ENSG00000140600|Q99963-2|SH3GL3	REV__nc|ENSG00000140600|Q99963-2|SH3GL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.854248046875	2	568.854181	1135.69381	-1.3907	-0.00079112	-0.55616	-0.00031637	-1.9469	-0.0011075	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.74721	2	11094	10909;11094		37.159	3.2375	1	72465000	+		50449	17655	33879	33892	56920;56921	56921					0.1313902685665198
RRGGAAAAGAR	11	Unmodified	_RRGGAAAAGAR_					0	0	0		ENST00000361246.6_1_14:103523571-103523724:-|nuORF	ENST00000361246.6_1_14:103523571-103523724:-|nuORF	ENST00000361246.6_1_14:103523571-103523724:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.2907409667969	2	507.289205	1012.56386	1.1757	0.00059642	1.5151	0.00076859	2.6908	0.001365	507.28974541507256	29.9	0.82313	29.81	29.575	30.398	-0.089544					35	18	3	0	0	0	0.60058	1	1925	1925		44.377	1.981	1	490380			50450	10469	33880	33893	56922	56922					0.05807850577502904
RRGGLGVP	8	Unmodified	_RRGGLGVP_					0	0	0		ENST00000332047.9_1_3:134204588-134204681:+|nuORF	ENST00000332047.9_1_3:134204588-134204681:+|nuORF	ENST00000332047.9_1_3:134204588-134204681:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2483215332031	2	406.248486	810.48242	1.1517	0.00046786	-0.91843	-0.00037311	0.23322	9.4746E-05	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.86791	1	9360	9360		28.254	1.4582	1	58759000			50451	10130	33881	33894	56923	56923					0.06959774885569914
RRGGLGVP	8	Unmodified	_RRGGLGVP_					0	0	0		ENST00000332047.9_1_3:134204588-134204681:+|nuORF	ENST00000332047.9_1_3:134204588-134204681:+|nuORF	ENST00000332047.9_1_3:134204588-134204681:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2484436035156	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.81548	1	10435	10435		20.482	0	1	28266000			50452	10130	33881	33894	56924	56924					0.06959774885569914
RRGGLRPRGR	10	Unmodified	_RRGGLRPRGR_					0	0	0			REV__ENST00000544662.1_1_12:132413925-132416751:+|nuORF	REV__ENST00000544662.1_1_12:132413925-132416751:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.866455078125	2	590.865946	1179.71734	-0.23931	-0.0001414	1.3195	0.00077964	1.0802	0.00063824	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.77314	1	10900	10900		40.778	10.46	1	39787000	+		50453	28431	33882	33895	56925	56925					0.13466885413845375
RRGGLRPRGR	10	Unmodified	_RRGGLRPRGR_					0	0	0			REV__ENST00000544662.1_1_12:132413925-132416751:+|nuORF	REV__ENST00000544662.1_1_12:132413925-132416751:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8667602539062	2	590.865946	1179.71734	-0.64255	-0.00037966	1.2551	0.00074162	0.61259	0.00036196	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.86218	1	11146	11146		32.812	0	1	52912000	+		50454	28431	33882	33895	56926	56926					0.13466885413845375
RRGGLRPRGR	10	Unmodified	_RRGGLRPRGR_					0	0	0			REV__ENST00000544662.1_1_12:132413925-132416751:+|nuORF	REV__ENST00000544662.1_1_12:132413925-132416751:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8670043945312	2	590.865946	1179.71734	0.84845	0.00050132	-0.15772	-9.3192E-05	0.69073	0.00040813	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.77314	2	10926	10902;10926		40.778	6.6056	1	94771000	+		50455	28431	33882	33895	56927;56928	56928					0.13466885413845375
RRGGPGVL	8	Unmodified	_RRGGPGVL_					0	0	0		ENST00000374242.8_1_9:115478806-115480332:-|nuORF;ENST00000374234.1_1_9:115449830-115480332:-|nuORF	ENST00000374242.8_1_9:115478806-115480332:-|nuORF	ENST00000374242.8_1_9:115478806-115480332:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2484130859375	2	406.248486	810.48242	-1.8141	-0.00073698	2.0083	0.00081588	0.1942	7.8892E-05	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.86791	1	8897	8897		28.254	1.4582	1	42617000			50456	10770	33883	33896	56929	56929					0.06959774885569914
RRGHHVNNP	9	Unmodified	_RRGHHVNNP_					0	0	0			REV__nc|ENSG00000020181|Q96PE1-2|ADGRA2	REV__nc|ENSG00000020181|Q96PE1-2|ADGRA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	543.7885131835938	2	543.78683	1085.55911	-0.13722	-7.462E-05	2.4654	0.0013406	2.3281	0.001266	543.7880009644933	33.057	0.747	33.06	32.762	33.509	0.0030785					35	16	3	0	0	0	0.38563	1	1877	1877		58.782	4.0056	1	283920	+		50457	16234	33884	33897	56930	56930					0.019749664347500584
RRGIEKASVLL	11	Unmodified	_RRGIEKASVLL_					0	0	0		ENSG00000121270|ENST00000356608|ABCC11;nc|ENSG00000121270|Q96J66-2|ABCC11;ENST00000567385.5_1_16:48244807-48265838:-|nuORF	ENSG00000121270|ENST00000356608|ABCC11	ENSG00000121270|ENST00000356608|ABCC11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.3921508789062	2	621.388054	1240.76155	4.2384	0.0026337	3.5756	0.0022219	7.814	0.0048555	621.3901654110842	104.31	1.8962	104.53	104.05	105.95	0.2268					124	45	4	0	0	0	0.73893	1	12768	12768		24.519	0.99649	1	1273000			50458	3171	33885	33898	56931	56931					0.15080431996784682
RRGLAAPA	8	Unmodified	_RRGLAAPA_					0	0	0		ENST00000513185.1_1_5:98109449-98109824:+|nuORF	ENST00000513185.1_1_5:98109449-98109824:+|nuORF	ENST00000513185.1_1_5:98109449-98109824:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2493896484375	2	406.248486	810.48242	3.144	0.0012772	-2.6463	-0.0010751	0.49768	0.00020218	406.2473237922933	114.03	1.1173	114.05	113.12	114.24	0.020027					74	50	2	0	0	0	0.81724	1	13732	13732		14.664	0	1	65995			50459	13045	33886	33899	56932	56932					0.06959774885547176
RRGLAAPA	8	Unmodified	_RRGLAAPA_					0	0	0		ENST00000513185.1_1_5:98109449-98109824:+|nuORF	ENST00000513185.1_1_5:98109449-98109824:+|nuORF	ENST00000513185.1_1_5:98109449-98109824:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2486267089844	2	406.248486	810.48242	3.1449	0.0012776	-2.7889	-0.001133	0.35606	0.00014465	406.24727030482205	114.56	0.97545	114.57	114.14	115.12	0.0094528					67	46	2	0	0	0	0.86294	1	13817	13817		8.8223	0	1	78189			50460	13045	33886	33899	56933	56933					0.06959774885547176
RRGLAPAA	8	Unmodified	_RRGLAPAA_					0	0	0			REV__ENSG00000142279|ENST00000590071|WTIP	REV__ENSG00000142279|ENST00000590071|WTIP	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.246826171875	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.84	1	119.87	119.37	120.37	0.026466								0	0	0	0.30004	1	13184	13184		21.702	6.0661	1		+		50461	19735	33887	33900	56934	56934					0.06959774885547176
RRGLFAVSF	9	Unmodified	_RRGLFAVSF_					0	0	0			REV__ENSG00000213699|ENST00000344420|SLC35F6	REV__ENSG00000213699|ENST00000344420|SLC35F6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	527.3059692382812	2	526.803626	1051.5927	-1.5276	-0.00080476	4.3964	0.002316	2.8688	0.0015113	526.8081287810614	99.219	1.531	99.405	98.808	100.34	0.18581					123	35	5	0	0	0	0.78058	1	10228	10228		30.504	0	1	2548800	+		50462	23630	33888	33901	56935	56935					0.06896575153928097
RRGLGVPG	8	Unmodified	_RRGLGVPG_					0	0	0		ENST00000252599.8_2_19:17693482-17693788:+|nuORF	ENST00000252599.8_2_19:17693482-17693788:+|nuORF	ENST00000252599.8_2_19:17693482-17693788:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2483825683594	2	406.248486	810.48242	-1.235	-0.0005017	1.527	0.00062034	0.29202	0.00011863	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.86791	1	10577	10577		28.254	0	1	38125000			50463	9308	33889	33902	56936	56936					0.06959774885569914
RRGLIGFG	8	Unmodified	_RRGLIGFG_					0	0	0		ENST00000585629.1_1_18:58330357-58331131:+|nuORF	ENST00000585629.1_1_18:58330357-58331131:+|nuORF	ENST00000585629.1_1_18:58330357-58331131:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.261962890625	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.82464	1	3141	3141		21.702	0	1	21381000			50464	14151	33890	33903	56937	56937					0.07144347919654592
RRGLLGLRGSL	11	Unmodified	_RRGLLGLRGSL_					0	0	0			REV__nc|ENSG00000288642|P51861|CDR1	REV__nc|ENSG00000288642|P51861|CDR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.3797607421875	2	599.380563	1196.74657	3.2712	0.0019607	-4.2058	-0.0025209	-0.93465	-0.00056021	599.3778849492661	103.51	3.7036	103.46	103.04	106.74	-0.043755					239	88	5	0	0	0	0.72106	1	11302	11302		28.081	1.3886	1	11967000	+		50465	30288	33891	33904	56938	56938					0.15606984919463684
RRGLLGLRGSL	11	Unmodified	_RRGLLGLRGSL_					0	0	0			REV__nc|ENSG00000288642|P51861|CDR1	REV__nc|ENSG00000288642|P51861|CDR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3818969726562	2	599.380563	1196.74657	0.97491	0.00058434	-1.8328	-0.0010985	-0.85787	-0.00051419	599.3792959797308	103.23	2.9032	103.41	102.97	105.87	0.18297					219	73	5	0	0	0	0.70737	1	10864	10864		30.318	3.6248	1	22539000	+		50466	30288	33891	33904	56939	56939					0.15606984919463684
RRGLLGLRGSL	11	Unmodified	_RRGLLGLRGSL_					0	0	0			REV__nc|ENSG00000288642|P51861|CDR1	REV__nc|ENSG00000288642|P51861|CDR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	599.3799438476562	2	599.380563	1196.74657	2.2233	0.0013326	-1.7579	-0.0010537	0.46535	0.00027892	599.3794612183918	103.02	0.80547	103.24	103.04	103.84	0.22556					35	21	2	0	0	0	0.74763	1	12513	12513		22.58	5.1116	1	2193500	+		50467	30288	33891	33904	56940	56940					0.15606984919463684
RRGLLLFMD	9	Unmodified	_RRGLLLFMD_					0	0	0		ENST00000485748.5_1_1:1420203-1425183:+|nuORF;nc|ENSG00000160072|Q5T9A4-3|ATAD3B;ENST00000472194.6_1_1:1413873-1431194:+|nuORF;ENSG00000160072|ENST00000673477|ATAD3B	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	ENST00000485748.5_1_1:1420203-1425183:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8201293945312	2	560.818418	1119.62228	1.394	0.00078178	1.0555	0.00059192	2.4495	0.0013737	560.8189408405052	92.38	3.0704	92.425	91.102	94.172	0.045456					218	72	4	0	0	0	0.72402	1	9674	9674		38.806	12.113	1	723720			50468	5553	33892	33905	56941	56941					0.06725771107767287
RRGLLVLRL	9	Unmodified	_RRGLLVLRL_					0	0	0		ENSG00000188305|ENST00000342063|PEAK3	ENSG00000188305|ENST00000342063|PEAK3	ENSG00000188305|ENST00000342063|PEAK3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3739624023438	2	548.377292	1094.74003	-1.4498	-0.00079504	-4.1619	-0.0022823	-5.6117	-0.0030773	548.3748802153438	35.47	1.1138	35.47	34.867	35.98	0					77	29	3	0	0	0	0.7932	1	1995	1995		17.365	5.1581	1	301910			50469	7919	33893	33906	56942	56942					0.19645091758729905
RRGLNKGQRPK	11	Unmodified	_RRGLNKGQRPK_					0	0	0			REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2678527832031	3	437.268971	1308.78508	1.2133	0.00053055	-3.7673	-0.0016473	-2.5539	-0.0011168	437.2672396896614	50.554	1.7579	50.562	49.504	51.262	0.0077477					187	47	5	0	0	0	0.74771	1	4395	4395		22.562	2.5311	1	3327600	+		50470	28452	33894	33907	56943	56943					0.14304290553968713
RRGLRPGPEL	10	Unmodified	_RRGLRPGPEL_					0	0	0		ENST00000234256.3_1_2:65216547-65216976:+|nuORF	ENST00000234256.3_1_2:65216547-65216976:+|nuORF	ENST00000234256.3_1_2:65216547-65216976:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8430786132812	2	575.843813	1149.67307	1.6833	0.00096931	-3.0775	-0.0017722	-1.3942	-0.00080286	575.8419126202111	90.702	2.7581	90.632	88.716	91.474	-0.069977					216	65	4	0	0	0	0.8608	1	9522	9522		34.173	1.3601	1	1939000			50471	9227	33895	33908	56944	56944					0.10422436476983421
RRGLRPGPEL	10	Unmodified	_RRGLRPGPEL_					0	0	0		ENST00000234256.3_1_2:65216547-65216976:+|nuORF	ENST00000234256.3_1_2:65216547-65216976:+|nuORF	ENST00000234256.3_1_2:65216547-65216976:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.84375	2	575.843813	1149.67307	0.91732	0.00052823	-2.5477	-0.0014671	-1.6304	-0.00093886	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.8608	1	9849	9849		34.173	3.6689	1	5468500			50472	9227	33895	33908	56945	56945					0.10422436476983421
RRGLRPGPEL	10	Unmodified	_RRGLRPGPEL_					0	0	0		ENST00000234256.3_1_2:65216547-65216976:+|nuORF	ENST00000234256.3_1_2:65216547-65216976:+|nuORF	ENST00000234256.3_1_2:65216547-65216976:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8428344726562	2	575.843813	1149.67307	0.61103	0.00035186	-2.2107	-0.001273	-1.5997	-0.00092115	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.77314	1	9370	9370		40.778	7.9657	1	6623700			50473	9227	33895	33908	56946	56946					0.10422436476983421
RRGLRPGPEL	10	Unmodified	_RRGLRPGPEL_					0	0	0		ENST00000234256.3_1_2:65216547-65216976:+|nuORF	ENST00000234256.3_1_2:65216547-65216976:+|nuORF	ENST00000234256.3_1_2:65216547-65216976:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8430786132812	2	575.843813	1149.67307	-1.368	-0.00078773	-0.22538	-0.00012979	-1.5933	-0.00091752	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.80179	1	9431	9431		39.253	1.4413	1	6121300			50474	9227	33895	33908	56947	56947					0.10422436476983421
RRGLVLLRCR	10	Unmodified	_RRGLVLLRCR_					0	0	0			REV__ENST00000483218.1_1_2:237076179-237122307:+|nuORF	REV__ENST00000483218.1_1_2:237076179-237122307:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.3935546875	2	621.390408	1240.76626	2.9766	0.0018496	0.7245	0.00045019	3.7011	0.0022998	621.3907359645153	104.71	2.7313	104.66	104.1	106.83	-0.04039					247	64	5	0	0	0	0.85694	1	11628	11628		21.96	0	1	12926000	+		50475	26417	33896	33909	56948	56948					0.15551037658565292
RRGLVLLRCR	10	Unmodified	_RRGLVLLRCR_					0	0	0			REV__ENST00000483218.1_1_2:237076179-237122307:+|nuORF	REV__ENST00000483218.1_1_2:237076179-237122307:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.3930053710938	2	621.390408	1240.76626	2.1086	0.0013103	2.0241	0.0012577	4.1327	0.002568	621.3915992412323	104.3	2.0291	104.48	104.04	106.07	0.18888					138	51	4	0	0	0	0.85694	1	12730	12730		21.96	1.9631	1	1168000	+		50476	26417	33896	33909	56949	56949					0.15551037658565292
RRGLVSHSRLC	11	Unmodified	_RRGLVSHSRLC_					0	0	0			REV__ENSG00000204642|ENST00000259951|HLA-F	REV__ENSG00000204642|ENST00000259951|HLA-F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.36572265625	2	642.359305	1282.70406	1.7225	0.0011065	2.5574	0.0016427	4.2799	0.0027492	643.3619135879084	110.42	1.1704	110.45	109.96	111.13	0.031738					75	39	3	0	0	0	0.69931	1	12138	12138		31.634	4.9414	1	150630	+		50477	23513	33897	33910	56950	56950					0.0740126651958235
RRGPAGVV	8	Unmodified	_RRGPAGVV_					0	0	0		nc|ENSG00000170703|Q8N841-4|TTLL6;ENSG00000170703|ENST00000393382|TTLL6	nc|ENSG00000170703|Q8N841-4|TTLL6	nc|ENSG00000170703|Q8N841-4|TTLL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24853515625	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.87276	1	10508	10508		29.842	3.0454	1	28266000			50478	6608	33898	33911	56951	56951					0.06959774885569914
RRGPGKGP	8	Unmodified	_RRGPGKGP_					0	0	0		ENSG00000113905|ENST00000232003|HRG	ENSG00000113905|ENST00000232003|HRG	ENSG00000113905|ENST00000232003|HRG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7460021972656	2	412.746111	823.477669	2.8762	0.0011871	-2.3909	-0.00098683	0.4853	0.00020031	412.7450091002515	84.946	2.9822	85.005	83.717	86.699	0.05925					127	68	4	0	0	0	0.82419	1	8642	8642		13.775	4.3048	1	1583700			50479	2751	33899	33912	56952	56952					0.05886890742806372
RRGPGKGP	8	Unmodified	_RRGPGKGP_					0	0	0		ENSG00000113905|ENST00000232003|HRG	ENSG00000113905|ENST00000232003|HRG	ENSG00000113905|ENST00000232003|HRG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7461242675781	2	412.746111	823.477669	0.59258	0.00024459	0.14054	5.8006E-05	0.73312	0.00030259	412.7459816855853	84.982	2.6893	85.131	84.474	87.163	0.14857					120	62	4	0	0	0	0.86288	1	8325	8325		26.796	0	1	1216600			50480	2751	33899	33912	56953	56953					0.05886890742806372
RRGPGLVG	8	Unmodified	_RRGPGLVG_					0	0	0			REV__ENST00000470890.1_1_1:27683440-27683647:-|nuORF	REV__ENST00000470890.1_1_1:27683440-27683647:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2481994628906	2	406.248486	810.48242	0.62319	0.00025317	-0.33604	-0.00013652	0.28715	0.00011666	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.83466	1	8919	8919		23.037	0	1	38001000	+		50481	27222	33900	33913	56954	56954					0.06959774885569914
RRGPKWAR	8	Unmodified	_RRGPKWAR_					0	0	0			REV__ENST00000567700.5_1_16:1832933-1836988:+|nuORF	REV__ENST00000567700.5_1_16:1832933-1836988:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8092651367188	2	513.807034	1025.59952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.813	1	50.721	50.221	51.221	-0.091797								0	0	0	0.30252	1	4015	4015		19.36	0.25645	1		+		50482	28882	33901	33914	56955	56955					0.0877393282517005
RRGQLTDRRG	10	Unmodified	_RRGQLTDRRG_					0	0	0			REV__ENST00000525592.1_3_14:24664067-24664784:-|nuORF	REV__ENST00000525592.1_3_14:24664067-24664784:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5641784667969	3	405.565676	1213.6752	0.092234	3.7407E-05	-2.4354	-0.00098772	-2.3432	-0.00095031	405.5646064688323	59.947	1.8016	59.915	58.946	60.747	-0.031731					126	47	3	0	0	0	0.86621	1	5657	5657		26.063	4.3776	1	288430	+		50483	28187	33902	33915	56956	56956					0.07690865214772202
RRGQLTDRRG	10	Unmodified	_RRGQLTDRRG_					0	0	0			REV__ENST00000525592.1_3_14:24664067-24664784:-|nuORF	REV__ENST00000525592.1_3_14:24664067-24664784:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5654602050781	3	405.565676	1213.6752	-0.19603	-7.9504E-05	-2.1531	-0.0008732	-2.3491	-0.00095271	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.85259	1	6005	6005		20.03	1.4994	1	328790	+		50484	28187	33902	33915	56957	56957					0.07690865214772202
RRGQLTDRRG	10	Unmodified	_RRGQLTDRRG_					0	0	0			REV__ENST00000525592.1_3_14:24664067-24664784:-|nuORF	REV__ENST00000525592.1_3_14:24664067-24664784:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5637512207031	3	405.565676	1213.6752	1.3715	0.00055625	-3.7278	-0.0015119	-2.3562	-0.00095561	405.5640303977856	59.974	1.644	60.007	59.019	60.663	0.032822					112	41	3	0	0	0	0.85692	1	5591	5591		36.318	13.756	1	297440	+		50485	28187	33902	33915	56958	56958					0.07690865214772202
RRGQPTEVKVL	11	Unmodified	_RRGQPTEVKVL_					0	0	0			REV__ENST00000552176.2_17:6916465-6916567:+|nuORF	REV__ENST00000552176.2_17:6916465-6916567:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8816528320312	2	641.883136	1281.75172	-0.046992	-3.0164E-05	-0.94307	-0.00060534	-0.99006	-0.0006355	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.58425	1	9863	9863		45.972	0	1	2217900	+		50486	28618	33903	33916	56959	56959					0.12211243991396259
RRGRALRLVRR	11	Unmodified	_RRGRALRLVRR_					0	0	0		ENST00000542643.6_1_1:21923469-21929393:-|nuORF;ENST00000374763.6_2_1:21923469-21929399:-|nuORF	ENST00000542643.6_1_1:21923469-21929393:-|nuORF	ENST00000542643.6_1_1:21923469-21929393:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.3114013671875	3	470.311393	1407.91235	0.67382	0.0003169	-0.69366	-0.00032624	-0.019841	-9.3315E-06	470.3110345822015	16.507	0.35062	16.483	16.317	16.668	-0.024035					30	14	3	0	0	0	0.74771	1	154	154		22.562	2.2466	1	202990			50487	10786	33904	33917	56960	56960					0.2247105621877381
RRGRLSAL	8	Unmodified	_RRGRLSAL_					0	0	0			REV__ENST00000366759.8_2_1:227923102-227935438:+|nuORF	REV__ENST00000366759.8_2_1:227923102-227935438:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7906494140625	2	464.793592	927.572632	-1.9025	-0.00088428	-4.2508	-0.0019758	-6.1534	-0.00286	464.7914872059108	34.459	1.5924	34.459	34.009	35.601	0					104	42	3	0	0	0	0.81724	1	1851	1851		14.664	0	1	277220	+		50488	25536	33905	33918	56961	56961					0.10594824213978882
RRGRPGGALAL	11	Unmodified	_RRGRPGGALAL_					0	0	0		ENST00000315691.7_1_3:143690972-143691332:+|nuORF	ENST00000315691.7_1_3:143690972-143691332:+|nuORF	ENST00000315691.7_1_3:143690972-143691332:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	562.3433837890625	2	562.343981	1122.67341	-1.412	-0.00079401	0.83639	0.00047034	-0.57558	-0.00032367	562.3442982549859	90.512	3.3727	90.693	89.307	92.679	0.18029					187	79	3	0	0	0	0.71452	1	9025	9025		29.15	1.0681	1	509350			50489	9980	33906	33919	56962	56962					0.11697856196815337
RRGRSSRPSAS	11	Unmodified	_RRGRSSRPSAS_					0	0	0			REV__ENST00000539243.6_1_19:1086270-1086483:+|nuORF	REV__ENST00000539243.6_1_19:1086270-1086483:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.8359375	2	608.834508	1215.65446	3.145	0.0019148	0.94815	0.00057727	4.0932	0.0024921	608.8349484484327	110.59	1.437	110.57	110.28	111.71	-0.027641					106	45	4	0	0	0	0.7434	1	12288	12288		23.523	2.5758	1	3029200	+		50490	28446	33907	33920	56963	56963					0.05526274835142431
RRGSGRGLGRK	11	Unmodified	_RRGSGRGLGRK_					0	0	0		ENST00000512519.1_1_5:38844000-38845907:-|nuORF	ENST00000512519.1_1_5:38844000-38845907:-|nuORF	ENST00000512519.1_1_5:38844000-38845907:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5807189941406	3	400.577916	1198.71192	3.1799	0.0012738	3.3331	0.0013352	6.513	0.002609	400.5790522363323	116.4	0.81905	116.42	115.99	116.81	0.026466					36	27	2	0	0	0	0.76892	1	12767	12767		17.833	1.1158	1	41735			50491	13040	33908	33921	56964	56964					0.12051161831368518
RRGSQSLKWP	10	Unmodified	_RRGSQSLKWP_					0	0	0			REV__ENSG00000160993|ENST00000292566|ALKBH4	REV__ENSG00000160993|ENST00000292566|ALKBH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.56439208984375	3	405.563273	1213.66799	-0.19603	-7.9504E-05	3.7734	0.0015303	3.5773	0.0014508	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.86718	1	6029	6029		20.03	0	1	328790	+		50492	20754	33909	33922	56965	56965					0.06970132614355862
RRGSVAETVPT	11	Unmodified	_RRGSVAETVPT_					0	0	0			REV__ENSG00000132768|ENST00000255108|DPH2	REV__ENSG00000132768|ENST00000255108|DPH2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.8237915039062	2	586.822744	1171.63093	-0.26066	-0.00015296	2.0511	0.0012036	1.7905	0.0010507	586.8238105998267	110.35	1.3355	110.35	110.09	111.43	0					132	40	5	0	0	0	0.7144	1	11455	11455		29.17	0	1	4860400	+		50493	19029	33910	33923	56966	56966					0.05198416277949036
RRGSVAETVPT	11	Unmodified	_RRGSVAETVPT_					0	0	0			REV__ENSG00000132768|ENST00000255108|DPH2	REV__ENSG00000132768|ENST00000255108|DPH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	586.8240966796875	2	586.822744	1171.63093	0.78756	0.00046216	1.4279	0.0008379	2.2154	0.0013001	586.8234697400546	110.07	1.5893	110.19	110.01	111.6	0.12024					137	58	3	0	0	0	0.7144	1	11838	11838		29.17	2.4771	1	6218400	+		50494	19029	33910	33923	56967	56967					0.05198416277949036
RRGVGLLRRR	10	Unmodified	_RRGVGLLRRR_					0	0	0			REV__ENST00000446845.5_1_3:38207005-38207431:+|nuORF	REV__ENST00000446845.5_1_3:38207005-38207431:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7668762207031	3	413.605806	1237.79559	0.1977	8.177E-05	-3.2437	-0.0013416	-3.046	-0.0012598	413.6044486266836	41.123	1.202	41.196	40.965	42.167	0.073414					42	31	2	0	0	0	0.37624	1	2758	2758		26.063	0	1	80909	+		50495	26813	33911	33924	56968	56968					0.1862031799905708
RRGVPAVG	8	Unmodified	_RRGVPAVG_					0	0	0			REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2489013671875	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114	1	113.97	113.47	114.47	-0.024452								0	0	0	0.29871	1	12621	12621		23.037	2.5549	1		+		50496	25339	33912	33925	56969	56969					0.06959774885558545
RRGVPAVG	8	Unmodified	_RRGVPAVG_					0	0	0			REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24847412109375	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.82464	2	9024	9024;9327		21.702	1.2205	1	56664000	+		50497	25339	33912	33925	56970;56971	56970					0.06959774885558545
RRGVPAVG	8	Unmodified	_RRGVPAVG_					0	0	0			REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2484130859375	2	406.248486	810.48242	3.1803	0.001292	-2.4584	-0.00099873	0.7219	0.00029327	406.2473607643489	90.704	2.3213	90.75	90.262	92.583	0.046448					123	55	3	0	0	0	0.83466	1	9398	9398		23.037	0	1	1081600	+		50498	25339	33912	33925	56972	56972					0.06959774885558545
RRGVPAVG	8	Unmodified	_RRGVPAVG_					0	0	0			REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.24774169921875	2	406.248486	810.48242	-1.8141	-0.00073698	2.0083	0.00081588	0.1942	7.8892E-05	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.87276	1	9008	9008		29.842	8.1392	1	42617000	+		50499	25339	33912	33925	56973	56973					0.06959774885558545
RRGVPAVG	8	Unmodified	_RRGVPAVG_					0	0	0			REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	406.248486	810.48242	-1.9275	-0.00078306	2.6578	0.0010797	0.73023	0.00029665	406.2494715444893	90.638	1.8224	90.818	90.389	92.211	0.18029	-0.11495	0.0015429	NaN	23.037	100	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	761320	+		50500	25339	33912	33925							0.06959774885558545
RRGVPAVG	8	Unmodified	_RRGVPAVG_					0	0	0			REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	406.248486	810.48242	2.1801	0.00088567	-1.7401	-0.00070691	0.44002	0.00017876	406.24766651805754	90.575	1.6516	91.025	90.49	92.141	0.45058	0.092273	-0.0020304	NaN	23.037	89	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	655480	+		50501	25339	33912	33925							0.06959774885558545
RRGVPAVG	8	Unmodified	_RRGVPAVG_					0	0	0			REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	REV__ENST00000442586.1_1_7:79763850-79764393:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	406.248486	810.48242	-1.3743	-0.00055829	1.8665	0.00075828	0.49228	0.00019999	406.2491258772639	90.575	1.9245	91.046	90.446	92.37	0.47068	0.11257	0.00090003	NaN	23.037	95	46	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	896710	+		50502	25339	33912	33925							0.06959774885558545
RRGWLKSLIH	10	Unmodified	_RRGWLKSLIH_					0	0	0			REV__ENST00000587091.5_2_X:73751613-73751946:+|nuORF	REV__ENST00000587091.5_2_X:73751613-73751946:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3826293945312	2	633.383106	1264.75166	-0.76689	-0.00048573	4.3361	0.0027464	3.5692	0.0022607	633.3857297307702	51.44	1.7579	51.44	50.814	52.572	0					77	46	2	0	0	0	0.85086	1	4197	4197		19.997	10.814	1	76099	+		50503	29122	33913	33926	56974	56974					0.12987288782096584
RRGWSTPVL	9	Unmodified	_RRGWSTPVL_					0	0	0			REV__ENST00000305850.9_1_16:81040219-81040375:+|nuORF	REV__ENST00000305850.9_1_16:81040219-81040375:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.3053588867188	2	536.306532	1070.59851	-1.1531	-0.0006184	-0.13142	-7.0481E-05	-1.2845	-0.00068888	536.3062938836811	45.052	0.57086	45.896	45.625	46.196	0.84438					19	13	2	0	0	0	0.58668	1	4180	4180		47.657	0	1	363340	+		50504	24820	33914	33927	56975	56975					0.06603673665608767
RRGYKKSPK	9	Unmodified	_RRGYKKSPK_					0	0	0			REV__ENST00000511367.6_1_5:31464413-31466317:-|nuORF	REV__ENST00000511367.6_1_5:31464413-31466317:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.34033203125	2	560.340907	1118.66726	1.3346	0.00074785	-2.4815	-0.0013905	-1.1468	-0.0006426	560.3393959922291	89.415	3.8062	89.464	86.947	90.753	0.048157					198	89	4	0	0	0	0.76419	1	9213	9213		35.152	4.8343	1	1103500	+		50505	27968	33915	33928	56976	56976					0.11267337965318802
RRGYKKSPK	9	Unmodified	_RRGYKKSPK_					0	0	0			REV__ENST00000511367.6_1_5:31464413-31466317:-|nuORF	REV__ENST00000511367.6_1_5:31464413-31466317:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3402709960938	2	560.340907	1118.66726	0.75729	0.00042434	-2	-0.0011207	-1.2427	-0.00069633	560.3396777082794	89.478	2.7427	89.63	87.684	90.427	0.1519					160	64	4	0	0	0	0.78912	1	8963	8963		28.081	0.19925	1	678500	+		50506	27968	33915	33928	56977	56977					0.11267337965318802
RRGYKKSPK	9	Unmodified	_RRGYKKSPK_					0	0	0			REV__ENST00000511367.6_1_5:31464413-31466317:-|nuORF	REV__ENST00000511367.6_1_5:31464413-31466317:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3408203125	2	560.340907	1118.66726	1.4125	0.0007915	-2.3969	-0.0013431	-0.98437	-0.00055158	560.3394435206833	89.174	0.87046	89.625	89.242	90.113	0.45058					49	20	3	0	0	0	0.6204	1	10541	10541		45.972	3.4978	1	577310	+		50507	27968	33915	33928	56978	56978					0.11267337965318802
RRHAELAPLA	10	Unmodified	_RRHAELAPLA_					0	0	0		ENSG00000120662|ENST00000379480|MTRF1;nc|ENSG00000120662|O75570-2|MTRF1	ENSG00000120662|ENST00000379480|MTRF1	ENSG00000120662|ENST00000379480|MTRF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.330078125	2	567.330539	1132.64652	2.9351	0.0016651	-3.9677	-0.002251	-1.0327	-0.00058588	567.3281367260898	114.07	0.9398	114.04	113.65	114.59	-0.024452					66	32	3	0	0	0	0.37624	1	12604	12604		20.947	5.3051	1	557170			50508	3141	33916	33929	56979	56979					0.08550747585650242
RRHAELAPLA	10	Unmodified	_RRHAELAPLA_					0	0	0		ENSG00000120662|ENST00000379480|MTRF1;nc|ENSG00000120662|O75570-2|MTRF1	ENSG00000120662|ENST00000379480|MTRF1	ENSG00000120662|ENST00000379480|MTRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3304443359375	2	567.330539	1132.64652	1.492	0.00084643	-2.5283	-0.0014344	-1.0363	-0.00058793	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.8608	1	9195	9195		34.173	6.2903	1	5346500			50509	3141	33916	33929	56980	56980					0.08550747585650242
RRHGPASAANA	11	Unmodified	_RRHGPASAANA_					0	0	0		ENSG00000187135|ENST00000335523|VSTM2B	ENSG00000187135|ENST00000335523|VSTM2B	ENSG00000187135|ENST00000335523|VSTM2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.28759765625	2	554.291945	1106.56934	0.00356	1.9733E-06	-3.8548	-0.0021367	-3.8513	-0.0021347	554.2894534905307	30.481	0.4809	30.485	30.229	30.71	0.0037193					17	10	2	0	0	0	0.638	1	2020	2020		40.058	1.252	1	186360			50510	7843	33917	33930	56981	56981					0.020315293693329295
RRHGYMGH	8	Unmodified	_RRHGYMGH_					0	0	0		nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.7926025390625	2	507.245952	1012.47735	-0.75998	-0.0003855	-4.1607	-0.0021105	-4.9207	-0.002496	507.24354891527804	31.318	0.30498	31.398	31.209	31.514	0.079836					9	6	2	0	0	0	0.4196	1	2123	2123		23.037	15.843	1	42620			50511	2507	33918	33931	56982	56982					-0.02838852248692092
RRHISFGKPW	10	Unmodified	_RRHISFGKPW_					0	0	0			REV__ENST00000532486.5_1_8:144774355-144776697:+|nuORF	REV__ENST00000532486.5_1_8:144774355-144776697:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8604125976562	2	642.359631	1282.70471	2.6974	0.0017327	1.0185	0.00065424	3.7159	0.0023869	642.359695370679	114.18	2.3126	114.16	113.46	115.77	-0.024452					163	86	2	0	0	0	0.8608	1	12765	12765		34.173	2.5383	1	464940	+		50512	28326	33919	33932	56983	56983					0.07466429230930771
RRHKGATIKG	10	Unmodified	_RRHKGATIKG_					0	0	0			REV__ENSG00000186472|ENST00000333891|PCLO	REV__ENSG00000186472|ENST00000333891|PCLO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	562.3463134765625	2	562.343981	1122.67341	-1.412	-0.00079401	0.83639	0.00047034	-0.57558	-0.00032367	562.3442982549859	90.512	3.3727	90.693	89.307	92.679	0.18029					187	79	3	0	0	0	0.8932	1	9121	9121		10.265	0.5596	1	509350	+		50513	22856	33920	33933	56984	56984					0.11697856196815337
RRHLLKRTVKQ	11	Unmodified	_RRHLLKRTVKQ_					0	0	0		nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A	nc|ENSG00000144285|P35498-3|SCN1A	nc|ENSG00000144285|P35498-3|SCN1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30975341796875	3	478.975788	1433.90553	-0.20548	-9.8418E-05	-2.506	-0.0012003	-2.7115	-0.0012987	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.81219	1	3485	3485		8.7993	1.458	1	468190			50514	4699	33921	33934	56985	56985					0.20593698547577333
RRHMAYLN	8	Unmodified	_RRHMAYLN_					0	0	0			REV__ENSG00000168229|ENST00000306051|PTGDR	REV__ENSG00000168229|ENST00000306051|PTGDR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.7786865234375	2	530.777085	1059.53962	-0.3325	-0.00017648	3.8081	0.0020213	3.4756	0.0018448	530.7789303124472	57.032	1.1704	57.429	57.029	58.199	0.39672					55	26	3	0	0	0	0.93529	1	5957	5957		52.299	13.046	1	3032800	+		50515	21470	33922	33935	56986	56986					0.012228740996306442
RRHMAYLN	8	Unmodified	_RRHMAYLN_					0	0	0			REV__ENSG00000168229|ENST00000306051|PTGDR	REV__ENSG00000168229|ENST00000306051|PTGDR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.779296875	2	530.777085	1059.53962	0.16511	8.7634E-05	2.6904	0.001428	2.8555	0.0015156	530.7787664374874	55.197	0.70773	55.765	55.531	56.239	0.56836					37	16	4	0	0	0	0.91005	1	5677	5677		42.474	1.0478	1	1565500	+		50516	21470	33922	33935	56987	56987					0.012228740996306442
RRHRPVTP	8	Unmodified	_RRHRPVTP_					0	0	0			REV__ENST00000366966.6_1_1:213124062-213124690:+|nuORF	REV__ENST00000366966.6_1_1:213124062-213124690:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8036193847656	2	509.804491	1017.59443	0.6868	0.00035014	-2.2328	-0.0011383	-1.546	-0.00078818	509.80326235241614	86.403	4.313	86.552	84.994	89.307	0.14902					345	101	5	0	0	0	0.90465	1	8599	8599		40.573	6.4001	1	3017600	+		50517	25542	33923	33936	56988	56988					0.08633628962559214
RRHRQRKRERK	11	Unmodified	_RRHRQRKRERK_					0	0	0		ENST00000543442.1_1_12:67660488-67660587:-|nuORF	ENST00000543442.1_1_12:67660488-67660587:-|nuORF	ENST00000543442.1_1_12:67660488-67660587:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.3253173828125	3	535.996356	1604.96724	-0.092548	-4.9605E-05	-4.2296	-0.0022671	-4.3221	-0.0023167	535.9938438356778	108.1	0.11936	108.06	107.99	108.11	-0.042404					6	4	2	0	0	0	0.1842	1	11780	11780		1.523	0.20106	1	510770			50518	13552	33924	33937	56989	56989					0.18895443019437153
RRHRQRKRERK	11	Unmodified	_RRHRQRKRERK_					0	0	0		ENST00000543442.1_1_12:67660488-67660587:-|nuORF	ENST00000543442.1_1_12:67660488-67660587:-|nuORF	ENST00000543442.1_1_12:67660488-67660587:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.6593017578125	3	535.996356	1604.96724	-0.091743	-4.9174E-05	-3.8214	-0.0020483	-3.9132	-0.0020974	535.993758301663	108.3	0.28812	108.26	108.15	108.44	-0.042404					13	10	2	0	0	0	0.18421	1	11792	11792		1.4188	1.4188	1	537530			50519	13552	33924	33937	56990	56990					0.18895443019437153
RRHSQVNW	8	Unmodified	_RRHSQVNW_					0	0	0		ENST00000367607.7_2_1:179924016-179959652:+|nuORF	ENST00000367607.7_2_1:179924016-179959652:+|nuORF	ENST00000367607.7_2_1:179924016-179959652:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.7857055664062	2	541.783756	1081.55296	-0.22268	-0.00012064	3.042	0.0016481	2.8193	0.0015275	541.7852590351226	56.903	1.7601	56.891	56.59	58.35	-0.012203					157	62	4	0	0	0	0.60155	2	5175	5156;5175		71.378	1.7503	1	5602900			50520	10563	33925	33938	56991;56992	56992					0.015444482032080487
RRHSQVNW	8	Unmodified	_RRHSQVNW_					0	0	0		ENST00000367607.7_2_1:179924016-179959652:+|nuORF	ENST00000367607.7_2_1:179924016-179959652:+|nuORF	ENST00000367607.7_2_1:179924016-179959652:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7833862304688	2	541.783756	1081.55296	0.62478	0.0003385	2.1542	0.0011671	2.779	0.0015056	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.89043	1	5372	5372		35.618	5.1146	1	5802700			50521	10563	33925	33938	56993	56993					0.015444482032080487
RRHTQGKRR	9	Unmodified	_RRHTQGKRR_					0	0	0			REV__ENST00000399788.6_1_12:498336-498612:-|nuORF	REV__ENST00000399788.6_1_12:498336-498612:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8558959960938	2	597.855578	1193.6966	-0.4308	-0.00025756	1.5202	0.00090889	1.0894	0.00065133	597.8562580242035	92.27	2.7665	92.315	90.514	93.28	0.045448					217	66	5	0	0	0	0.7932	1	9571	9571		26.693	2.1737	1	1998300	+		50522	26238	33926	33939	56994	56994					0.10750295034154078
RRHVRWWRVLR	11	Unmodified	_RRHVRWWRVLR_					0	0	0		ENST00000542104.5_2_12:65089076-65089520:+|nuORF	ENST00000542104.5_2_12:65089076-65089520:+|nuORF	ENST00000542104.5_2_12:65089076-65089520:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	540.65576171875	3	540.658793	1618.95455	-0.50353	-0.00027224	-2.473	-0.0013371	-2.9765	-0.0016093	540.6571692747744	107.19	1.2914	107.19	106.44	107.73	0					64	23	4	0	0	0	0.92221	2	11117	11111;11117		1.2319	1.2319	1	347600			50523	13523	33927	33940	56995;56996	56996					0.16983031627160017
RRHVRWWRVLR	11	Unmodified	_RRHVRWWRVLR_					0	0	0		ENST00000542104.5_2_12:65089076-65089520:+|nuORF	ENST00000542104.5_2_12:65089076-65089520:+|nuORF	ENST00000542104.5_2_12:65089076-65089520:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.9903564453125	3	540.658793	1618.95455	1.4534	0.0007858	-4.26	-0.0023032	-2.8066	-0.0015174	540.9906622835479	106.83	0.89928	106.93	106.59	107.49	0.10396					68	32	3	0	0	0	0.92221	2	12996	12996;13007		1.2319	0	1	194260			50524	13523	33927	33940	56997;56998	56997					0.16983031627160017
RRIAFILY	8	Unmodified	_RRIAFILY_					0	0	0		nc|ENSG00000087263|Q8N543-2|OGFOD1;ENSG00000087263|ENST00000566157|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.7817993164062	2	526.324194	1050.63383	0.36876	0.00019409	0.24802	0.00013054	0.61678	0.00032463	526.3242573377842	49.438	1.4999	49.441	48.841	50.34	0.0035934					52	33	2	0	0	0	0.4196	1	4212	4212		57.453	10.686	1	91344			50525	1573	33928	33941	56999	56999					0.110543361934333
RRIAFILY	8	Unmodified	_RRIAFILY_					0	0	0		nc|ENSG00000087263|Q8N543-2|OGFOD1;ENSG00000087263|ENST00000566157|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3243408203125	2	526.324194	1050.63383	-0.18547	-9.7616E-05	1.313	0.00069106	1.1275	0.00059344	526.3248074069744	59.278	1.5395	59.372	58.359	59.898	0.094059					97	61	2	0	0	0	0.86791	1	5091	5091		28.254	7.7724	1	183600			50526	1573	33928	33941	57000	57000					0.110543361934333
RRIAFILY	8	Unmodified	_RRIAFILY_					0	0	0		nc|ENSG00000087263|Q8N543-2|OGFOD1;ENSG00000087263|ENST00000566157|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3239135742188	2	526.324194	1050.63383	-0.1675	-8.8157E-05	1.64	0.00086315	1.4725	0.00077499	526.3248551186259	69.406	0.51508	69.541	69.11	69.625	0.13521					34	22	2	0	0	0	0.82464	1	6248	6248		21.702	2.3424	1	161590			50527	1573	33928	33941	57001	57001					0.110543361934333
RRIAFILY	8	Unmodified	_RRIAFILY_					0	0	0		nc|ENSG00000087263|Q8N543-2|OGFOD1;ENSG00000087263|ENST00000566157|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.325439453125	2	526.324194	1050.63383	-0.47524	-0.00025013	1.6222	0.00085382	1.147	0.00060369	526.3249338013496	58.169	1.8631	58.152	57.321	59.184	-0.01643					135	84	2	0	0	0	0.86791	1	5033	5033		28.254	1.4582	1	207480			50528	1573	33928	33941	57002	57002					0.110543361934333
RRIAFILY	8	Unmodified	_RRIAFILY_					0	0	0		nc|ENSG00000087263|Q8N543-2|OGFOD1;ENSG00000087263|ENST00000566157|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.32470703125	2	526.324194	1050.63383	-0.53497	-0.00028157	1.5071	0.00079323	0.97214	0.00051166	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.82464	1	5138	5138		21.702	2.3424	1	220370			50529	1573	33928	33941	57003	57003					0.110543361934333
RRIAFILY	8	Unmodified	_RRIAFILY_					0	0	0		nc|ENSG00000087263|Q8N543-2|OGFOD1;ENSG00000087263|ENST00000566157|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3222045898438	2	526.324194	1050.63383	-1.1167	-0.00058772	2.2537	0.0011862	1.137	0.00059845	526.3252520860087	76.123	0.86795	76.213	75.973	76.841	0.089363					54	30	2	0	0	0	0.82464	1	7055	7055		21.702	3.3779	1	85783			50530	1573	33928	33941	57004	57004					0.110543361934333
RRIAFILY	8	Unmodified	_RRIAFILY_					0	0	0		nc|ENSG00000087263|Q8N543-2|OGFOD1;ENSG00000087263|ENST00000566157|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	526.324194	1050.63383	-1.3552	-0.00071329	2.2634	0.0011913	0.90812	0.00047797	526.3252432162407	49.663	1.8355	49.663	48.821	50.657	0	0.11938	0.001537	NaN	57.453	60	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72757			50531	1573	33928	33941							0.110543361934333
RRIAFILY	8	Unmodified	_RRIAFILY_					0	0	0		nc|ENSG00000087263|Q8N543-2|OGFOD1;ENSG00000087263|ENST00000566157|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	526.324194	1050.63383	0.36565	0.00019245	0.31167	0.00016404	0.67732	0.00035649	526.3242010017709	49.485	2.3241	49.527	48.21	50.534	0.04224	-0.016837	-0.00051741	NaN	57.453	92	58	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	168610			50532	1573	33928	33941							0.110543361934333
RRIAFILY	8	Unmodified	_RRIAFILY_					0	0	0		nc|ENSG00000087263|Q8N543-2|OGFOD1;ENSG00000087263|ENST00000566157|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	526.324194	1050.63383	0.54464	0.00028666	0.92928	0.0004891	1.4739	0.00077576	526.3246735960478	69.333	0.33627	69.463	69.21	69.546	0.1291	-0.080876	-0.0002101	NaN	21.702	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102600			50533	1573	33928	33941							0.110543361934333
RRIAFILY	8	Unmodified	_RRIAFILY_					0	0	0		nc|ENSG00000087263|Q8N543-2|OGFOD1;ENSG00000087263|ENST00000566157|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	nc|ENSG00000087263|Q8N543-2|OGFOD1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	526.324194	1050.63383	0.83111	0.00043743	0.10747	5.6567E-05	0.93859	0.000494	526.324116822881	69.243	1.2396	69.627	68.569	69.808	0.38416	0.083571	-0.0010752	NaN	21.702	44	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124060			50534	1573	33928	33941							0.110543361934333
RRIFRSPSA	9	Unmodified	_RRIFRSPSA_					0	0	0			REV__ENST00000584234.5_1_17:63204097-63223522:+|nuORF	REV__ENST00000584234.5_1_17:63204097-63223522:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.317626953125	2	545.317432	1088.62031	-1.4651	-0.00079892	0.057523	3.1368E-05	-1.4075	-0.00076755	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.71772	1	8556	8556		39.253	0	1	4998200	+		50535	17704	33929	33942	57005	57005					0.07954478414194455
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.829833984375	2	553.828786	1105.64302	-0.64285	-0.00035603	2.932	0.0016238	2.2891	0.0012678	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.7932	1	8528	8528		21.96	1.013	1	1181400	+		50536	24049	33930	33943	57006	57006					0.09442361487435846
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8301391601562	2	553.828786	1105.64302	-0.60953	-0.00033757	3.1509	0.0017451	2.5414	0.0014075	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.76255	1	8732	8732		35.618	5.3006	1	3935500	+		50537	24049	33930	33943	57007	57007					0.09442361487435846
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8300170898438	2	553.828786	1105.64302	-0.7821	-0.00043315	3.398	0.0018819	2.6159	0.0014488	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.78058	2	9215	9215;9322		30.504	0	1	5219600	+		50538	24049	33930	33943	57008;57009	57008					0.09442361487435846
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.829833984375	2	553.828786	1105.64302	2.0416	0.0011307	0.42617	0.00023602	2.4678	0.0013667	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.74721	6	9419	9419;9516;9540;9564;9612;9696		37.159	12.956	1	5457600	+		50539	24049	33930	33943	57010;57011;57012;57013;57014;57015	57010					0.09442361487435846
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8298950195312	2	553.828786	1105.64302	1.287	0.00071279	1.2184	0.00067476	2.5054	0.0013876	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.78058	1	9348	9348		30.504	5.0535	1	5348100	+		50540	24049	33930	33943	57016	57016					0.09442361487435846
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.83056640625	2	553.828786	1105.64302	0.28172	0.00015602	2.2579	0.0012505	2.5397	0.0014065	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.78536	1	9161	9161		29.15	6.1071	1	6402500	+		50541	24049	33930	33943	57017	57017					0.09442361487435846
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8297119140625	2	553.828786	1105.64302	0.76565	0.00042404	1.7912	0.000992	2.5568	0.001416	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.74721	1	9050	9050		37.159	1.5408	1	6029400	+		50542	24049	33930	33943	57018	57018					0.09442361487435846
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8298950195312	2	553.828786	1105.64302	-1.4375	-0.00079614	3.6733	0.0020344	2.2358	0.0012382	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.76764	1	8705	8705		34.173	1.3601	1	1728300	+		50543	24049	33930	33943	57019	57019					0.09442361487435846
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8305053710938	2	553.828786	1105.64302	-1.4397	-0.00079733	3.9475	0.0021862	2.5078	0.0013889	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.74721	2	9159	8979;9159		37.159	8.0096	1	5453100	+		50544	24049	33930	33943	57020;57021	57021					0.09442361487435846
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8296508789062	2	553.828786	1105.64302	0.37109	0.00020552	2.0145	0.0011157	2.3856	0.0013212	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.72402	2	10265	10265;10409		38.806	6.8513	1	1786500	+		50545	24049	33930	33943	57022;57023	57022					0.09442361487435846
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8302001953125	2	553.828786	1105.64302	0.84671	0.00046893	2.1445	0.0011877	2.9912	0.0016566	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.78058	1	10850	10850		30.504	5.0535	1	5381700	+		50546	24049	33930	33943	57024	57024					0.09442361487435846
RRIFVLTAM	9	Unmodified	_RRIFVLTAM_					0	0	0			REV__ENSG00000282419|ENST00000632372|TEX13D	REV__ENSG00000282419|ENST00000632372|TEX13D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8300170898438	2	553.828786	1105.64302	-1.2274	-0.00067979	3.5625	0.001973	2.3351	0.0012933	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.74721	2	10405	10405;10554		37.159	12.64	1	1825600	+		50547	24049	33930	33943	57025;57026	57025					0.09442361487435846
RRIIGGDEF	9	Unmodified	_RRIIGGDEF_					0	0	0			REV__nc|ENSG00000096060|Q13451-2|FKBP5	REV__nc|ENSG00000096060|Q13451-2|FKBP5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2461547851562	2	531.788173	1061.56179	0.33015	0.00017557	1.7404	0.00092551	2.0705	0.0011011	532.2901722885161	51.642	0.42371	52.077	51.948	52.372	0.43505					13	9	2	0	0	0	0.20789	1	5127	5127		53.351	24.202	1	132320	+		50548	17072	33931	33944	57027	57027					0.03347377049044553
RRIIGGDEF	9	Unmodified	_RRIIGGDEF_					0	0	0			REV__nc|ENSG00000096060|Q13451-2|FKBP5	REV__nc|ENSG00000096060|Q13451-2|FKBP5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	531.788173	1061.56179	0.58614	0.0003117	0.92496	0.00049188	1.5111	0.00080358	532.289655386092	51.459	0.33499	52.126	51.895	52.23	0.66729	0.024554	-0.00044385	NaN	53.351	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	184810	+		50549	17072	33931	33944							0.03347377049044553
RRIKLRCLHKL	11	Unmodified	_RRIKLRCLHKL_					0	0	0			REV__ENSG00000146809|ENST00000451215|ASB15	REV__ENSG00000146809|ENST00000451215|ASB15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3082275390625	3	479.310002	1434.90818	-0.63549	-0.0003046	-1.5532	-0.00074449	-2.1887	-0.0010491	479.30917580991905	52.514	1.6934	52.49	51.325	53.018	-0.023849					51	40	2	0	0	0	0.80813	1	4564	4564		9.6461	0.84683	1	106560	+		50550	20032	33932	33945	57028	57028					0.20811830680872845
RRIKLRCLHKL	11	Unmodified	_RRIKLRCLHKL_					0	0	0			REV__ENSG00000146809|ENST00000451215|ASB15	REV__ENSG00000146809|ENST00000451215|ASB15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3086853027344	3	479.310002	1434.90818	-1.2686	-0.00060804	-0.47804	-0.00022913	-1.7466	-0.00083717	479.3097502684534	47.94	0.94824	47.937	47.755	48.703	-0.002449					33	26	2	0	0	0	0.81021	1	3980	3980		9.2118	2.5522	1	215950	+		50551	20032	33932	33945	57029	57029					0.20811830680872845
RRILHPLGSV	10	Unmodified	_RRILHPLGSV_					0	0	0		ENST00000425350.1_1_13:49151796-49152201:-|nuORF	ENST00000425350.1_1_13:49151796-49152201:-|nuORF	ENST00000425350.1_1_13:49151796-49152201:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3565063476562	2	574.356557	1146.69856	-1.0357	-0.00059487	-0.061954	-3.5583E-05	-1.0977	-0.00063045	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.86718	1	10659	10659		27.882	1.1893	1	715310			50552	11533	33933	33946	57030	57030					0.13107910999406158
RRILHPLGSV	10	Unmodified	_RRILHPLGSV_					0	0	0		ENST00000425350.1_1_13:49151796-49152201:-|nuORF	ENST00000425350.1_1_13:49151796-49152201:-|nuORF	ENST00000425350.1_1_13:49151796-49152201:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.35595703125	2	574.356557	1146.69856	1.1071	0.0006359	-2.2805	-0.0013098	-1.1733	-0.0006739	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.8608	1	10634	10634		34.173	6.2903	1	708140			50553	11533	33933	33946	57031	57031					0.13107910999406158
RRILIDTG	8	Unmodified	_RRILIDTG_					0	0	0		ENSG00000147592|ENST00000276590|LACTB2	ENSG00000147592|ENST00000276590|LACTB2	ENSG00000147592|ENST00000276590|LACTB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2879943847656	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.8347	1	9898	9898		23.042	1.0826	1	40161000			50554	4913	33934	33947	57032	57032					0.0874858239999412
RRILQTGP	8	Unmodified	_RRILQTGP_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7889099121094	2	470.787976	939.561398	0.22344	0.00010519	4.4293	0.0020853	4.6527	0.0021905	470.78980973205034	44.363	1.3298	44.34	43.809	45.139	-0.023079					53	30	2	0	0	0	0.86791	1	3422	3422		28.254	1.4582	1	151650			50555	7939	33935	33948	57033	57033					0.08920002119850778
RRIPRNTA	8	Unmodified	_RRIPRNTA_					0	0	0			REV__ENST00000256442.9_1_5:68462858-68462948:+|nuORF	REV__ENST00000256442.9_1_5:68462858-68462948:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.3035583496094	2	492.296499	982.578445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.338	1	65.464	64.964	65.964	0.12545								0	0	0	0.29631	1	5791	5791		25.45	0	1		+		50556	24325	33936	33949	57034	57034					0.08645922725634136
RRIRKHKS	8	Unmodified	_RRIRKHKS_					0	0	0		ENSG00000104714|ENST00000262109|ERICH1	ENSG00000104714|ENST00000262109|ERICH1	ENSG00000104714|ENST00000262109|ERICH1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.0294189453125	2	540.84669	1079.67883	0.003487	1.8859E-06	-3.1425	-0.0016996	-3.139	-0.0016977	541.3476543725642	43.666	1.5776	43.674	43.098	44.676	0.0084534					48	37	2	0	0	0	0.4196	1	3143	3143		12.207	3.3845	1	425190			50557	2142	33937	33950	57035	57035					0.1421757977930156
RRIRKLSFFT	10	Unmodified	_RRIRKLSFFT_					0	0	0			REV__ENSG00000196646|ENST00000343979|ZNF136	REV__ENSG00000196646|ENST00000343979|ZNF136	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2738952636719	3	441.938451	1322.79352	-0.49593	-0.00021917	3.7819	0.0016714	3.286	0.0014522	441.9399207304678	55.239	1.1399	55.213	54.702	55.842	-0.026581					95	31	4	0	0	0	0.85086	1	5037	5037		19.263	2.0959	1	363460	+		50558	23156	33938	33951	57036	57036					0.14503844470573313
RRIRKNKRRQA	11	Unmodified	_RRIRKNKRRQA_					0	0	0			REV__ENST00000529593.1_1_8:146277868-146278266:+|nuORF	REV__ENST00000529593.1_1_8:146277868-146278266:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.98504638671875	3	494.650186	1480.92873	0.28715	0.00014204	3.2977	0.0016312	3.5849	0.0017733	494.65196036974095	44.188	0.16302	44.237	44.133	44.296	0.048996					5	3	2	0	0	0	0.18066	1	3088	3088		14.086	0	1	40864	+		50559	25125	33939	33952	57037	57037					0.207501373849027
RRISRLFIKIF	11	Unmodified	_RRISRLFIKIF_					0	0	0		ENST00000405898.5_3_17:53046162-53063581:+|nuORF;ENST00000461444.5_1_17:53063026-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.6462097167969	3	483.645267	1447.91397	-1.6266	-0.00078667	3.9138	0.0018929	2.2872	0.0011062	483.64706776464374	46.522	1.6286	46.522	46.06	47.688	0					186	51	5	0	0	0	0.79224	1	3489	3489		12.957	2.3707	1	4540800			50560	11266	33940	33953	57038	57038					0.20793252464181933
RRISRLFIKIF	11	Unmodified	_RRISRLFIKIF_					0	0	0		ENST00000405898.5_3_17:53046162-53063581:+|nuORF;ENST00000461444.5_1_17:53063026-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.64630126953125	3	483.645267	1447.91397	-1.6009	-0.00077425	3.9927	0.001931	2.3918	0.0011568	483.64708308420245	48.306	2.7356	48.306	47.6	50.336	0					237	72	5	0	0	0	0.81021	1	3756	3756		9.2118	2.5522	1	1611600			50561	11266	33940	33953	57039	57039					0.20793252464181933
RRISRLFIKIF	11	Unmodified	_RRISRLFIKIF_					0	0	0		ENST00000405898.5_3_17:53046162-53063581:+|nuORF;ENST00000461444.5_1_17:53063026-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.64617919921875	3	483.645267	1447.91397	0.1589	7.6851E-05	2.108	0.0010195	2.2669	0.0010964	483.6461692650574	46.582	1.726	46.568	46.059	47.785	-0.013821					190	48	5	0	0	0	0.8398	2	3828	3724;3828		6.6596	0.33873	1	4073800			50562	11266	33940	33953	57040;57041	57041					0.20793252464181933
RRISRLFIKIF	11	Unmodified	_RRISRLFIKIF_					0	0	0		ENST00000405898.5_3_17:53046162-53063581:+|nuORF;ENST00000461444.5_1_17:53063026-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.64630126953125	3	483.645267	1447.91397	-0.70675	-0.00034182	3.2293	0.0015618	2.5226	0.00122	483.64669708915295	48.116	2.7534	48.091	47.541	50.295	-0.025112					215	68	5	0	0	0	0.7896	2	4075	4051;4075		13.508	1.0751	1	2356400			50563	11266	33940	33953	57042;57043	57043					0.20793252464181933
RRISRLFIKIF	11	Unmodified	_RRISRLFIKIF_					0	0	0		ENST00000405898.5_3_17:53046162-53063581:+|nuORF;ENST00000461444.5_1_17:53063026-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.646240234375	3	483.645267	1447.91397	-1.5595	-0.00075426	3.9278	0.0018997	2.3683	0.0011454	483.6470312482302	48.336	2.6056	48.333	47.817	50.423	-0.002449					214	62	5	0	0	0	0.78683	2	4012	4012;4024		14.086	1.1285	1	2393300			50564	11266	33940	33953	57044;57045	57044					0.20793252464181933
RRISRLFIKIF	11	Unmodified	_RRISRLFIKIF_					0	0	0		ENST00000405898.5_3_17:53046162-53063581:+|nuORF;ENST00000461444.5_1_17:53063026-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.6462707519531	3	483.645267	1447.91397	0.29802	0.00014413	2.0448	0.00098898	2.3429	0.0011331	483.6461229931169	46.466	1.647	46.505	45.984	47.631	0.038181					176	46	5	0	0	0	0.7896	2	3382	3382;3405		13.508	4.2961	1	4692700			50565	11266	33940	33953	57046;57047	57046					0.20793252464181933
RRISRLFIKIF	11	Unmodified	_RRISRLFIKIF_					0	0	0		ENST00000405898.5_3_17:53046162-53063581:+|nuORF;ENST00000461444.5_1_17:53063026-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.6460266113281	3	483.645267	1447.91397	-0.19648	-9.5025E-05	2.5143	0.001216	2.3179	0.001121	483.6463549494067	46.472	1.6155	46.393	45.933	47.548	-0.079002					182	48	5	0	0	0	0.78683	2	3440	3396;3440		14.086	5.6788	1	4742900			50566	11266	33940	33953	57048;57049	57049					0.20793252464181933
RRISRLFIKIF	11	Unmodified	_RRISRLFIKIF_					0	0	0		ENST00000405898.5_3_17:53046162-53063581:+|nuORF;ENST00000461444.5_1_17:53063026-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.6460266113281	3	483.645267	1447.91397	-0.37847	-0.00018305	1.7915	0.00086646	1.413	0.00068341	483.6460621723924	44.406	1.6273	44.856	44.239	45.867	0.45025					169	39	6	0	0	0	0.7896	2	4069	4045;4069		13.508	1.0751	1	32621000			50567	11266	33940	33953	57050;57051	57051					0.20793252464181933
RRISRLFIKIF	11	Unmodified	_RRISRLFIKIF_					0	0	0		ENST00000405898.5_3_17:53046162-53063581:+|nuORF;ENST00000461444.5_1_17:53063026-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.6461486816406	3	483.645267	1447.91397	-0.50388	-0.0002437	2.5819	0.0012487	2.0781	0.001005	483.64638428050455	45.883	1.292	46.354	45.807	47.099	0.47139					126	31	5	0	0	0	0.80593	2	4267	4267;4322		10.104	0.8921	1	13323000			50568	11266	33940	33953	57052;57053	57052					0.20793252464181933
RRISRLFIKIF	11	Unmodified	_RRISRLFIKIF_					0	0	0		ENST00000405898.5_3_17:53046162-53063581:+|nuORF;ENST00000461444.5_1_17:53063026-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.6462707519531	3	483.645267	1447.91397	-1.5634	-0.00075612	2.895	0.0014002	1.3316	0.00064403	483.6466147917682	44.248	1.3424	45.092	44.653	45.995	0.84438					150	32	6	0	0	0	0.78683	1	4143	4143		14.086	0.57807	1	35535000			50569	11266	33940	33953	57054	57054					0.20793252464181933
RRISRLFIKIF	11	Unmodified	_RRISRLFIKIF_					0	0	0		ENST00000405898.5_3_17:53046162-53063581:+|nuORF;ENST00000461444.5_1_17:53063026-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	ENST00000405898.5_3_17:53046162-53063581:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.6458740234375	3	483.645267	1447.91397	-0.99627	-0.00048184	3.0941	0.0014964	2.0978	0.0010146	483.64666286648185	45.633	1.4844	46.528	45.964	47.448	0.89542					143	36	5	0	0	0	0.80813	1	4309	4309		9.6461	0.43434	1	13898000			50570	11266	33940	33953	57055	57055					0.20793252464181933
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.6462707519531	3	483.645267	1447.91397	-1.6266	-0.00078667	3.9138	0.0018929	2.2872	0.0011062	483.64706776464374	46.522	1.6286	46.522	46.06	47.688	0					186	51	5	0	0	0	0.77205	2	3500	3500;3536		17.167	5.7732	1	4540800	+		50571	21357	33941	33954	57056;57057	57056					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.98077392578125	3	483.645267	1447.91397	-1.6009	-0.00077425	3.9927	0.001931	2.3918	0.0011568	483.64708308420245	48.306	2.7356	48.306	47.6	50.336	0					237	72	5	0	0	0	0.77205	2	3766	3744;3766		17.167	7.5206	1	1611600	+		50572	21357	33941	33954	57058;57059	57059					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.6461181640625	3	483.645267	1447.91397	0.1589	7.6851E-05	2.108	0.0010195	2.2669	0.0010964	483.6461692650574	46.582	1.726	46.568	46.059	47.785	-0.013821					190	48	5	0	0	0	0.77803	7	3783	3743;3763;3774;3783;3795;3818;3838		15.921	7.1213	1	4073800	+		50573	21357	33941	33954	57060;57061;57062;57063;57064;57065;57066	57063					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.6465759277344	3	483.645267	1447.91397	0.10651	5.1514E-05	2.4662	0.0011928	2.5727	0.0012443	483.6463288941527	48.079	2.6896	48.07	47.738	50.428	-0.0093269					180	66	5	0	0	0	0.76892	2	3962	3939;3962		17.833	8.187	1	2577700	+		50574	21357	33941	33954	57067;57068	57068					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.646240234375	3	483.645267	1447.91397	-0.78234	-0.00037837	3.0135	0.0014575	2.2312	0.0010791	483.64658979005526	46.598	1.6296	46.569	46.013	47.642	-0.028782					170	44	5	0	0	0	0.79476	8	3815	3815;3823;3834;3871;3882;3896;3908;3928		12.433	4.0256	1	5108400	+		50575	21357	33941	33954	57069;57070;57071;57072;57073;57074;57075;57076	57069					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.6463317871094	3	483.645267	1447.91397	-0.70675	-0.00034182	3.2293	0.0015618	2.5226	0.00122	483.64669708915295	48.116	2.7534	48.091	47.541	50.295	-0.025112					215	68	5	0	0	0	0.79224	5	4030	4030;4040;4063;4087;4100		12.957	3.221	1	2356400	+		50576	21357	33941	33954	57077;57078;57079;57080;57081	57077					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.6461181640625	3	483.645267	1447.91397	-1.6199	-0.00078345	3.8719	0.0018726	2.2521	0.0010892	483.64701567342865	46.699	1.7316	46.695	46.155	47.886	-0.0041618					198	50	6	0	0	0	0.77205	5	3807	3772;3807;3819;3831;3935		17.167	3.0807	1	5137200	+		50577	21357	33941	33954	57082;57083;57084;57085;57086	57083					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.6464538574219	3	483.645267	1447.91397	-1.5595	-0.00075426	3.9278	0.0018997	2.3683	0.0011454	483.6470312482302	48.336	2.6056	48.333	47.817	50.423	-0.002449					214	62	5	0	0	0	0.77205	4	4000	3977;4000;4047;4060		17.167	7.1871	1	2393300	+		50578	21357	33941	33954	57087;57088;57089;57090	57088					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.6463928222656	3	483.645267	1447.91397	-0.83799	-0.00040529	3.1748	0.0015355	2.3368	0.0011302	483.646679966578	46.367	1.8019	46.382	45.827	47.628	0.015514					182	51	6	0	0	0	0.77803	4	3425	3416;3425;3435;3454		15.921	6.2336	1	4521700	+		50579	21357	33941	33954	57091;57092;57093;57094	57092					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.6463623046875	3	483.645267	1447.91397	-0.83512	-0.0004039	3.4956	0.0016906	2.6605	0.0012867	483.6468148790766	48.119	2.7855	48.141	47.459	50.244	0.02227					217	75	4	0	0	0	0.7896	2	3614	3614;3623		13.508	3.404	1	1942300	+		50580	21357	33941	33954	57095;57096	57095					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.64642333984375	3	483.645267	1447.91397	0.29802	0.00014413	2.0448	0.00098898	2.3429	0.0011331	483.6461229931169	46.466	1.647	46.505	45.984	47.631	0.038181					176	46	5	0	0	0	0.77803	5	3416	3395;3416;3436;3445;3467		15.921	4.2847	1	4692700	+		50581	21357	33941	33954	57097;57098;57099;57100;57101	57098					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.6460266113281	3	483.645267	1447.91397	0.31415	0.00015194	2.1286	0.0010295	2.4428	0.0011814	483.64616192950325	48.329	2.4983	48.367	47.592	50.09	0.037735					188	68	4	0	0	0	0.7896	3	3706	3639;3658;3706		13.508	2.5522	1	2026900	+		50582	21357	33941	33954	57102;57103;57104	57104					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.64617919921875	3	483.645267	1447.91397	-0.19648	-9.5025E-05	2.5143	0.001216	2.3179	0.001121	483.6463549494067	46.472	1.6155	46.393	45.933	47.548	-0.079002					182	48	5	0	0	0	0.77205	2	3386	3386;3450		17.167	7.0628	1	4742900	+		50583	21357	33941	33954	57105;57106	57105					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.6463317871094	3	483.645267	1447.91397	-0.25795	-0.00012476	2.8039	0.0013561	2.546	0.0012314	483.6464782626143	48.15	2.9849	48.057	47.534	50.519	-0.093178					204	77	5	0	0	0	0.7896	4	3701	3641;3674;3692;3701		13.508	3.404	1	2128000	+		50584	21357	33941	33954	57107;57108;57109;57110	57110					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.64593505859375	3	483.645267	1447.91397	-0.37847	-0.00018305	1.7915	0.00086646	1.413	0.00068341	483.6460621723924	44.406	1.6273	44.856	44.239	45.867	0.45025					169	39	6	0	0	0	0.75457	6	4081	4081;4093;4105;4118;4129;4153		21.032	11.386	1	32621000	+		50585	21357	33941	33954	57111;57112;57113;57114;57115;57116	57111					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.6460876464844	3	483.645267	1447.91397	-0.50388	-0.0002437	2.5819	0.0012487	2.0781	0.001005	483.64638428050455	45.883	1.292	46.354	45.807	47.099	0.47139					126	31	5	0	0	0	0.79476	1	4257	4257		12.433	0.50046	1	13323000	+		50586	21357	33941	33954	57117	57117					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.6447448730469	3	483.645267	1447.91397	-1.5634	-0.00075612	2.895	0.0014002	1.3316	0.00064403	483.6466147917682	44.248	1.3424	45.092	44.653	45.995	0.84438					150	32	6	0	0	0	0.77205	6	4057	4033;4057;4081;4093;4106;4119		17.167	7.0628	1	35535000	+		50587	21357	33941	33954	57118;57119;57120;57121;57122;57123	57119					0.2079325246420467
RRITKIFVRIF	11	Unmodified	_RRITKIFVRIF_					0	0	0			REV__ENSG00000167114|ENST00000300456|SLC27A4	REV__ENSG00000167114|ENST00000300456|SLC27A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.64617919921875	3	483.645267	1447.91397	-0.99627	-0.00048184	3.0941	0.0014964	2.0978	0.0010146	483.64666286648185	45.633	1.4844	46.528	45.964	47.448	0.89542					143	36	5	0	0	0	0.76892	2	4233	4233;4261		17.833	7.7292	1	13898000	+		50588	21357	33941	33954	57124;57125	57124					0.2079325246420467
RRITLPGYVF	10	Unmodified	_RRITLPGYVF_					0	0	0			REV__nc|ENSG00000108684|Q16515|ASIC2	REV__nc|ENSG00000108684|Q16515|ASIC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3533935546875	2	611.358765	1220.70298	-0.25906	-0.00015838	-4.1924	-0.0025631	-4.4515	-0.0027215	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.85934	1	9388	9388		35.618	2.8059	1	3360200	+		50589	29771	33942	33955	57126	57126					0.10145375422303005
RRITLPGYVF	10	Unmodified	_RRITLPGYVF_					0	0	0			REV__nc|ENSG00000108684|Q16515|ASIC2	REV__nc|ENSG00000108684|Q16515|ASIC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.8582153320312	2	611.358765	1220.70298	-0.40504	-0.00024762	-3.36	-0.0020541	-3.765	-0.0023018	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.80179	1	10331	10331		39.253	1.4413	1	12417000	+		50590	29771	33942	33955	57127	57127					0.10145375422303005
RRITLPGYVF	10	Unmodified	_RRITLPGYVF_					0	0	0			REV__nc|ENSG00000108684|Q16515|ASIC2	REV__nc|ENSG00000108684|Q16515|ASIC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3563232421875	2	611.358765	1220.70298	0.21646	0.00013233	-4.1006	-0.0025069	-3.8841	-0.0023746	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.86718	1	10240	10240		27.882	0	1	12399000	+		50591	29771	33942	33955	57128	57128					0.10145375422303005
RRIVGKKK	8	Unmodified	_RRIVGKKK_					0	0	0		ENST00000590377.1_1_18:43328342-43332184:+|nuORF	ENST00000590377.1_1_18:43328342-43332184:+|nuORF	ENST00000590377.1_1_18:43328342-43332184:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.8429870605469	2	492.843085	983.671617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.36	1	117.36	116.86	117.86	0								0	0	0	0.30004	1	11990	11990		21.702	7.0382	1				50592	14256	33943	33956	57129	57129					0.1791284717888857
RRKAAALQPVE	11	Unmodified	_RRKAAALQPVE_					0	0	0			REV__ENST00000475066.1_1_7:154759501-154775093:-|nuORF	REV__ENST00000475066.1_1_7:154759501-154775093:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8692626953125	2	619.870028	1237.7255	0.62246	0.00038584	-1.8404	-0.0011408	-1.2179	-0.00075497	619.8687823008486	94.059	2.9324	94.104	92.154	95.087	0.045448					223	69	4	0	0	0	0.7434	1	9825	9825		23.523	1.5628	1	2371600	+		50593	20534	33944	33957	57130	57130					0.11614974819917734
RRKAAPLPGPT	11	Unmodified	_RRKAAPLPGPT_					0	0	0		ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3533325195312	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.69995	1	10746	10746		31.53	4.8369	1	61091000			50594	1709	33945	33958	57131	57131					0.11863607136797327
RRKAAPLPGPT	11	Unmodified	_RRKAAPLPGPT_					0	0	0		ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3536987304688	2	582.354014	1162.69348	-0.84093	-0.00048972	-0.12395	-7.2182E-05	-0.96488	-0.0005619	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.7342	1	11315	11315		25.574	1.3713	1	77752000			50595	1709	33945	33958	57132	57132					0.11863607136797327
RRKAAPLPGPT	11	Unmodified	_RRKAAPLPGPT_					0	0	0		ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.353759765625	2	582.354014	1162.69348	0.15817	9.2113E-05	-1.1126	-0.00064794	-0.95444	-0.00055582	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.69995	1	11184	11184		31.53	1.2121	1	78004000			50596	1709	33945	33958	57133	57133					0.11863607136797327
RRKAAPLPGPT	11	Unmodified	_RRKAAPLPGPT_					0	0	0		ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3538208007812	2	582.354014	1162.69348	0.72245	0.00042072	-1.6748	-0.00097534	-0.95238	-0.00055462	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.69995	1	10968	10968		31.53	1.2121	1	132960000			50597	1709	33945	33958	57134	57134					0.11863607136797327
RRKAERKKHS	10	Unmodified	_RRKAERKKHS_					0	0	0		ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3928833007812	2	648.391993	1294.76943	1.8787	0.0012181	-0.53827	-0.00034901	1.3404	0.00086912	648.3915145457087	107.1	1.2973	107.13	106.67	107.97	0.035622					111	30	4	0	0	0	0.86549	1	11795	11795		24.519	0	1	42934000			50598	1231	33946	33959	57135	57135					0.13384004036925035
RRKAERKKHS	10	Unmodified	_RRKAERKKHS_					0	0	0		ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3928833007812	2	648.391993	1294.76943	1.6039	0.00104	-0.16527	-0.00010716	1.4386	0.0009328	648.3917676742469	106.97	1.0935	107.11	106.64	107.73	0.13866					101	26	4	0	0	0	0.86272	1	11508	11508		24.519	0.28737	1	58516000			50599	1231	33946	33959	57136	57136					0.13384004036925035
RRKAERKKHS	10	Unmodified	_RRKAERKKHS_					0	0	0		ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3926391601562	2	648.391993	1294.76943	-1.1413	-0.00074	2.208	0.0014317	1.0667	0.00069167	648.3933115061765	106.13	0.94215	106.19	105.71	106.65	0.053757					81	22	4	0	0	0	0.86272	1	11294	11294		24.519	0.99649	1	40329000			50600	1231	33946	33959	57137	57137					0.13384004036925035
RRKAKANI	8	Unmodified	_RRKAKANI_					0	0	0			REV__nc|ENSG00000150593|Q53EL6-2|PDCD4	REV__nc|ENSG00000150593|Q53EL6-2|PDCD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.80615234375	2	478.809242	955.603932	-2.669	-0.0012779	-4.0656	-0.0019466	-6.7346	-0.0032246	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.80706	2	2749	2749;2797		26.796	6.3143	1	370420	+		50601	20213	33947	33960	57138;57139	57138					0.12435397248077606
RRKANGIEY	9	Unmodified	_RRKANGIEY_					0	0	0		ENST00000252674.8_2_19:6210599-6210812:-|nuORF	ENST00000252674.8_2_19:6210599-6210812:-|nuORF	ENST00000252674.8_2_19:6210599-6210812:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8062744140625	2	553.806897	1105.59924	0.10985	6.0836E-05	2.364	0.0013092	2.4739	0.00137	553.8080489034816	33.816	1.012	33.759	33.25	34.262	-0.056385					60	22	4	0	0	0	0.67345	1	2113	2113		42.396	8.2236	1	405460			50602	9309	33948	33961	57140	57140					0.05066468314657868
RRKARDRLKGG	11	Unmodified	_RRKARDRLKGG_					0	0	0		ENST00000487805.6_1_3:49734634-49735321:+|nuORF	ENST00000487805.6_1_3:49734634-49735321:+|nuORF	ENST00000487805.6_1_3:49734634-49735321:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.27288818359375	3	438.272604	1311.79598	2.7278	0.0011955	-1.8995	-0.00083248	0.82831	0.00036302	438.27166879991887	107.29	1.1275	107.26	106.75	107.88	-0.034134					106	26	5	0	0	0	0.76251	1	11930	11930		19.263	0.73163	1	5019700			50603	12607	33949	33962	57141	57141					0.15255692928235476
RRKEIVKHSV	10	Unmodified	_RRKEIVKHSV_					0	0	0			REV__nc|ENSG00000187821|A6NFD8-4|HELT	REV__nc|ENSG00000187821|A6NFD8-4|HELT	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.38623046875	2	626.385845	1250.75714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.16	1	108.25	107.75	108.75	0.084412								0	0	0	0.45132	1	11626	11626		13.454	0.64233	1		+		50604	22953	33950	33963	57142	57142					0.14178967573889167
RRKELTLGLR	10	Unmodified	_RRKELTLGLR_					0	0	0		nc|ENSG00000048392|Q7LG56-6|RRM2B	nc|ENSG00000048392|Q7LG56-6|RRM2B	nc|ENSG00000048392|Q7LG56-6|RRM2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3926391601562	2	621.39367	1240.77279	-1.2196	-0.00075786	-0.45293	-0.00028145	-1.6726	-0.0010393	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.85981	1	10972	10972		35.152	0	1	23459000			50605	14747	33951	33964	57143	57143					0.16203254090919472
RRKETSRGN	9	Unmodified	_RRKETSRGN_					0	0	0		chr10:68757377-68765888|40|30.18|0.98|4.95|+|2|CCAR1,CCAR1|3	chr10:68757377-68765888|40|30.18|0.98|4.95|+|2|CCAR1,CCAR1|3	chr10:68757377-68765888|40|30.18|0.98|4.95|+|2|CCAR1,CCAR1|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3064575195312	2	552.305052	1102.59555	0.26261	0.00014504	2.2495	0.0012424	2.5121	0.0013874	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.71772	1	9312	9312		39.253	6.4404	1	1950800			50606	80	33952	33965	57144	57144					0.04835798540830183
RRKFKKIFLRS	11	Unmodified	_RRKFKKIFLRS_					0	0	0			REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	REV__ENST00000380888.4_1_20:29523054-29523153:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.649658203125	3	493.652533	1477.93577	-1.9346	-0.00095502	-4.285	-0.0021153	-6.2196	-0.0030703	493.6503109233065	42.118	1.0078	42.815	42.456	43.463	0.69754					85	24	4	0	0	0	0.88916	1	3807	3807		3.4087	0.19739	1	1535500	+		50607	25957	33953	33966	57145	57145					0.21592057212774307
RRKGAVWSRKI	11	Unmodified	_RRKGAVWSRKI_					0	0	0		ENST00000531381.1_1_11:121972385-121972643:-|nuORF	ENST00000531381.1_1_11:121972385-121972643:-|nuORF	ENST00000531381.1_1_11:121972385-121972643:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.9482116699219	3	452.94935	1355.82622	1.1576	0.00052434	-3.3498	-0.0015173	-2.1922	-0.00099295	452.94782249291245	107.87	0.41002	107.9	107.56	107.97	0.035614					33	9	5	0	0	0	0.17586	1	11815	11815		27.644	8.3812	1	5036700			50608	13358	33954	33967	57146	57146					0.16254051593455188
RRKGAVWSRKI	11	Unmodified	_RRKGAVWSRKI_					0	0	0		ENST00000531381.1_1_11:121972385-121972643:-|nuORF	ENST00000531381.1_1_11:121972385-121972643:-|nuORF	ENST00000531381.1_1_11:121972385-121972643:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.9480285644531	3	452.94935	1355.82622	-1.7681	-0.00080086	-0.5215	-0.00023621	-2.2896	-0.0010371	452.9490232633925	106.96	1.0839	107.01	106.56	107.64	0.053757					98	25	5	0	0	0	0.69687	1	11393	11393		32.034	7.8023	1	4103500			50609	13358	33954	33967	57147	57147					0.16254051593455188
RRKILNILDS	10	Unmodified	_RRKILNILDS_					0	0	0		ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	614.3876953125	2	614.380229	1226.7459	2.8537	0.0017533	2.3705	0.0014564	5.2242	0.0032097	614.3814150214953	100.33	1.2648	100.28	99.651	100.92	-0.052109					57	28	3	0	0	0	0.86763	1	10909	10909		26.693	2.1737	1	240380			50610	5329	33955	33968	57148	57148					0.14160145479763742
RRKILVKGKK	10	Unmodified	_RRKILVKGKK_					0	0	0		ENST00000483685.5_1_2:219487553-219498591:+|nuORF;ENST00000459791.5_1_2:219494200-219498591:+|nuORF;ENST00000473443.5_1_2:219483577-219498591:+|nuORF;ENSG00000115556|ENST00000450993|PLCD4	ENST00000483685.5_1_2:219487553-219498591:+|nuORF	ENST00000483685.5_1_2:219487553-219498591:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	409.2918395996094	3	409.290825	1224.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.963	1	18.94	18.44	19.44	-0.023342								0	0	0	0.45132	1	383	383		10.587	2.7823	1				50611	2855	33956	33969	57149	57149					0.24721311746975516
RRKIMELITIA	11	Unmodified	_RRKIMELITIA_					0	0	0			REV__ENSG00000135999|ENST00000258484|EPC2	REV__ENSG00000135999|ENST00000258484|EPC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6097412109375	3	448.611235	1342.81188	-1.3368	-0.0005997	-2.8204	-0.0012653	-4.1572	-0.001865	448.60975879741926	77.285	1.2875	77.285	77.023	78.311	0					128	61	3	0	0	0	0.7896	1	7064	7064		13.508	0.55046	1	598490	+		50612	19278	33957	33970	57150	57150					0.15418218330319178
RRKITRYT	8	Unmodified	_RRKITRYT_					0	0	0		chrX:101408307-101411936|59|56.93|0.0|22.44|+|1|None,RPL36A-HNRNPH2|1	chrX:101408307-101411936|59|56.93|0.0|22.44|+|1|None,RPL36A-HNRNPH2|1	chrX:101408307-101411936|59|56.93|0.0|22.44|+|1|None,RPL36A-HNRNPH2|1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	547.3314208984375	2	547.333082	1092.65161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.97	1	107.93	107.43	108.43	-0.042404								0	0	0	0.29871	1	11771	11771		23.042	3.6825	1				50613	536	33958	33971	57151	57151					0.10899051448268438
RRKKAVYK	8	Unmodified	_RRKKAVYK_					0	0	0		nc|ENSG00000078018|P11137-3|MAP2;ENSG00000078018|ENST00000682079|MAP2	nc|ENSG00000078018|P11137-3|MAP2	nc|ENSG00000078018|P11137-3|MAP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8267211914062	2	524.840542	1047.66653	2.9418	0.001544	-2.3658	-0.0012417	0.57599	0.0003023	524.8391988171934	99.767	0.21582	99.714	99.607	99.823	-0.053741					7	4	2	0	0	0	0.4196	1	10797	10797		20.482	8.9708	1	55809			50614	1389	33959	33972	57152	57152					0.1446054331624964
RRKKGEEY	8	Unmodified	_RRKKGEEY_					0	0	0			REV__ENSG00000157445|ENST00000474759|CACNA2D3	REV__ENSG00000157445|ENST00000474759|CACNA2D3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.2954711914062	2	533.293622	1064.57269	-0.17445	-9.3032E-05	2.444	0.0013034	2.2696	0.0012103	533.2947736550041	83.064	1.3319	83.495	83.129	84.461	0.43108					72	31	3	0	0	0	0.90465	1	9652	9652		40.573	0	1	873570	+		50615	20544	33960	33973	57153	57153					0.04298779423334054
RRKKGPPPPS	10	Unmodified	_RRKKGPPPPS_					0	0	0			REV__ENST00000402703.6_1_14:37131094-37132119:+|nuORF	REV__ENST00000402703.6_1_14:37131094-37132119:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.34033203125	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.86763	1	11322	11322		26.693	3.6504	1	81463000	+		50616	26265	33961	33974	57154	57154					0.11267337965318802
RRKKGPPPPS	10	Unmodified	_RRKKGPPPPS_					0	0	0			REV__ENST00000402703.6_1_14:37131094-37132119:+|nuORF	REV__ENST00000402703.6_1_14:37131094-37132119:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3401489257812	2	560.340907	1118.66726	2.9009	0.0016255	-4.143	-0.0023215	-1.2421	-0.00069599	560.3384791854071	101.98	1.2376	102.3	101.86	103.1	0.32511					132	30	6	0	0	0	0.82886	1	12395	12395		37.812	8.662	1	15824000	+		50617	26265	33961	33974	57155	57155					0.11267337965318802
RRKKHSIFRH	10	Unmodified	_RRKKHSIFRH_					0	0	0			REV__ENST00000426871.1_1_1:151262664-151263682:+|nuORF	REV__ENST00000426871.1_1_1:151262664-151263682:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6092224121094	3	455.609328	1363.80615	-1.1702	-0.00053316	-0.91978	-0.00041906	-2.09	-0.00095222	455.6088473881977	71.256	2.1835	71.333	70.628	72.811	0.076225					206	91	3	0	0	0	0.86698	1	6578	6578		28.081	1.3318	1	589510	+		50618	19798	33962	33975	57156	57156					0.13880300653477207
RRKKKLRKL	9	Unmodified	_RRKKKLRKL_					0	0	0		ENST00000429378.5_3_16:242971-256079:-|nuORF	ENST00000429378.5_3_16:242971-256079:-|nuORF	ENST00000429378.5_3_16:242971-256079:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	409.29290771484375	3	409.294569	1224.86188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.411	1	21.411	20.911	21.911	0								0	0	0	0.36162	1	574	574		5.2201	2.0088	1				50619	11609	33963	33976	57157	57157					0.25844133841133043
RRKKLVNLQSW	11	Unmodified	_RRKKLVNLQSW_					0	0	0			REV__ENSG00000163156|ENST00000368905|SCNM1	REV__ENSG00000163156|ENST00000368905|SCNM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6258544921875	3	476.624643	1426.8521	-1.6911	-0.000806	-0.59192	-0.00028212	-2.283	-0.0010881	476.6241802064395	112.47	0.71533	112.44	112.25	112.96	-0.032333					34	19	2	0	0	0	0.77205	2	12019	11991;12019		17.167	1.8336	1	354050	+		50620	20886	33964	33977	57158;57159	57159					0.1557490104507906
RRKKLVNLQSW	11	Unmodified	_RRKKLVNLQSW_					0	0	0			REV__ENSG00000163156|ENST00000368905|SCNM1	REV__ENSG00000163156|ENST00000368905|SCNM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62286376953125	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.79476	1	12836	12836		12.433	0.50046	1	2577100	+		50621	20886	33964	33977	57160	57160					0.1557490104507906
RRKKMAKTT	9	Unmodified	_RRKKMAKTT_					0	0	0			REV__ENST00000427859.5_1_1:239870879-239871044:-|nuORF	REV__ENST00000427859.5_1_1:239870879-239871044:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3404541015625	2	560.342592	1118.67063	-1.1289	-0.00063255	-3.0813	-0.0017266	-4.2102	-0.0023591	560.3407299796369	89.624	3.285	89.693	87.185	90.47	0.068703					185	76	4	0	0	0	0.67345	2	9197	9149;9197		42.396	5.9494	1	1038600	+		50622	26574	33965	33978	57161;57162	57162					0.11604264747666093
RRKKPRRPPK	10	Unmodified	_RRKKPRRPPK_					0	0	0			REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2919006347656	3	440.29334	1317.85819	-0.14762	-6.4996E-05	-2.0228	-0.00089064	-2.1704	-0.00095563	440.29224154688933	58.12	1.3783	58.106	57.522	58.9	-0.013641					131	47	4	0	0	0	0.85086	1	5286	5286		19.263	8.6759	1	235220	+		50623	29312	33966	33979	57163	57163					0.21197464067267902
RRKKPRRPPK	10	Unmodified	_RRKKPRRPPK_					0	0	0			REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2919921875	3	440.29334	1317.85819	-0.12551	-5.5261E-05	-2.0465	-0.00090107	-2.172	-0.00095634	440.29228151572136	58.121	1.3606	58.091	57.557	58.917	-0.029865					98	39	4	0	0	0	0.8573	1	5353	5353		16.007	0	1	263280	+		50624	29312	33966	33979	57164	57164					0.21197464067267902
RRKKPRRPPK	10	Unmodified	_RRKKPRRPPK_					0	0	0			REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.29193115234375	3	440.29334	1317.85819	0.36311	0.00015988	-2.5683	-0.0011308	-2.2052	-0.00097093	440.2919928155031	58.022	1.2392	58.056	57.534	58.773	0.033905					105	37	4	0	0	0	0.8573	1	5290	5290		16.007	1.9208	1	302530	+		50625	29312	33966	33979	57165	57165					0.21197464067267902
RRKKPRRPPK	10	Unmodified	_RRKKPRRPPK_					0	0	0			REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	REV__ENST00000600714.5_1_19:53158930-53164070:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2927551269531	3	440.29334	1317.85819	0.35447	0.00015607	-2.6604	-0.0011714	-2.306	-0.0010153	440.2919905840395	57.84	1.0591	57.95	57.567	58.627	0.11027					127	50	3	0	0	0	0.88463	2	4893	4893;4900		11.636	1.0491	1	385740	+		50626	29312	33966	33979	57166;57167	57166					0.21197464067267902
RRKKRGRREW	10	Unmodified	_RRKKRGRREW_					0	0	0		ENST00000486943.1_3_X:49065690-49065852:-|nuORF	ENST00000486943.1_3_X:49065690-49065852:-|nuORF	ENST00000486943.1_3_X:49065690-49065852:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.6241455078125	3	476.623748	1426.84942	-0.84023	-0.00040047	0.66177	0.00031541	-0.17846	-8.506E-05	476.62395766938414	107.8	0.76151	107.8	107.11	107.87	0					44	18	5	0	0	0	0.86551	1	11228	11228		14.694	0.60766	1	82361000			50627	12592	33967	33980	57168	57168					0.1530649043077119
RRKKRRQREHL	11	Unmodified	_RRKKRRQREHL_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	521.991455078125	3	521.657341	1561.95019	0.0018454	9.6266E-07	-0.31319	-0.00016338	-0.31134	-0.00016241	521.6570438345822	55.201	1.4309	55.194	54.756	56.187	-0.0077057					142	39	5	0	0	0	0.8498	1	4941	4941		6.001	0	1	1446100			50628	311	33968	33981	57169	57169					0.19169522413631057
RRKKRRQREHL	11	Unmodified	_RRKKRRQREHL_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	521.6567993164062	3	521.657341	1561.95019	0.011985	6.2519E-06	-0.76413	-0.00039861	-0.75214	-0.00039236	521.6568251732957	55.332	1.3019	55.36	54.888	56.19	0.027672					121	33	5	0	0	0	0.8498	1	4975	4975		6.001	0.30226	1	1506400			50629	311	33968	33981	57170	57170					0.19169522413631057
RRKKRRQREHL	11	Unmodified	_RRKKRRQREHL_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	521.9915771484375	3	521.657341	1561.95019	-0.37881	-0.00019761	-0.027113	-1.4144E-05	-0.40592	-0.00021175	521.6571917476966	55.116	1.5547	55.068	54.591	56.146	-0.04821					175	52	5	0	0	0	0.81219	2	4602	4573;4602		8.7993	2.4062	1	1771100			50630	311	33968	33981	57171;57172	57172					0.19169522413631057
RRKKRRTC	8	Unmodified	_RRKKRRTC_					0	0	0		ENSG00000070495|ENST00000397625|JMJD6;nc|ENSG00000070495|Q6NYC1-3|JMJD6;ENST00000589982.1_1_17:74714813-74716591:-|nuORF	ENSG00000070495|ENST00000397625|JMJD6	ENSG00000070495|ENST00000397625|JMJD6	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3394775390625	2	552.338175	1102.6618	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.29	1	112.23	111.73	112.73	-0.063889								0	0	0	0.30884	1	12202	12202		13.775	0.81615	1				50631	1244	33969	33982	57173	57173					0.11457335901877741
RRKLEESA	8	Unmodified	_RRKLEESA_					0	0	0		nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC;ENSG00000134982|ENST00000257430|APC	nc|ENSG00000134982|P25054-2|APC	nc|ENSG00000134982|P25054-2|APC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.78033447265625	2	494.780348	987.546142	-0.074951	-3.7084E-05	0.21159	0.00010469	0.13664	6.7607E-05	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.89494	1	8747	8747		37.159	0	1	651380			50632	3976	33970	33983	57174	57174					0.05187090532001548
RRKLEESA	8	Unmodified	_RRKLEESA_					0	0	0		nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC;ENSG00000134982|ENST00000257430|APC	nc|ENSG00000134982|P25054-2|APC	nc|ENSG00000134982|P25054-2|APC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7795104980469	2	494.780348	987.546142	0.77018	0.00038107	-1.1499	-0.00056896	-0.37974	-0.00018789	494.77966004867045	84.042	2.7013	83.973	82.365	85.067	-0.069313					89	62	2	0	0	0	0.884	1	8558	8558		33.516	0	1	283830			50633	3976	33970	33983	57175	57175					0.05187090532001548
RRKLFYIKRKA	11	Unmodified	_RRKLFYIKRKA_					0	0	0		ENST00000367545.7_1_6:145173639-145173798:+|nuORF	ENST00000367545.7_1_6:145173639-145173798:+|nuORF	ENST00000367545.7_1_6:145173639-145173798:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.98388671875	3	493.652533	1477.93577	-1.6053	-0.00079248	-4.4432	-0.0021934	-6.0485	-0.0029859	493.6501931782481	44.56	1.836	44.56	43.623	45.459	0					138	44	4	0	0	0	0.81021	1	3176	3176		9.2118	3.513	1	434870			50634	10554	33971	33984	57176	57176					0.21592057212774307
RRKLILPR	8	Unmodified	_RRKLILPR_					0	0	0			REV__nc|ENSG00000111206|Q08050-2|FOXM1	REV__nc|ENSG00000111206|Q08050-2|FOXM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3605346679688	2	526.364185	1050.71382	-1.5421	-0.00081169	-4.0982	-0.0021571	-5.6402	-0.0029688	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.9159	1	2123	2123		44.531	9.3304	1	788470	+		50635	15528	33972	33985	57177	57177					0.19048822587274117
RRKLLLLL	8	Unmodified	_RRKLLLLL_					0	0	0		ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8096313476562	2	512.871311	1023.72807	-0.27244	-0.00013972	1.9585	0.0010044	1.686	0.00086472	513.3737671323709	50.932	0.40297	50.939	50.607	51.01	0.0077477					27	16	2	0	0	0	0.4196	1	4337	4337		8.2313	0	1	96473			50636	11399	33973	33986	57178	57178					0.21715475015582797
RRKLRLYD	8	Unmodified	_RRKLRLYD_					0	0	0			REV__ENSG00000139618|ENST00000380152|BRCA2	REV__ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3399658203125	2	560.340907	1118.66726	1.6683	0.00093481	-2.8998	-0.0016249	-1.2316	-0.00069009	560.3391894187363	89.567	3.3537	89.494	86.948	90.302	-0.07238					131	78	3	0	0	0	0.87479	1	9331	9331		30.504	4.9296	1	1075700	+		50637	19554	33974	33987	57179	57179					0.11267337965318802
RRKLTHLVSA	10	Unmodified	_RRKLTHLVSA_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8668212890625	2	590.867289	1179.72002	-0.23931	-0.0001414	-0.95289	-0.00056303	-1.1922	-0.00070443	590.8667803525842	103.7	3.7195	103.7	103.26	106.98	0					273	88	5	0	0	0	0.74274	4	10699	10699;10862;10874;10887		42.396	6.7778	1	39787000	+		50638	15798	33975	33988	57180;57181;57182;57183	57180					0.13735296028130506
RRKLTHLVSA	10	Unmodified	_RRKLTHLVSA_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8666381835938	2	590.867289	1179.72002	-0.64255	-0.00037966	-1.0172	-0.00060105	-1.6598	-0.00098071	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.74274	1	11242	11242		42.396	3.1433	1	52912000	+		50639	15798	33975	33988	57184	57184					0.13735296028130506
RRKLTHLVSA	10	Unmodified	_RRKLTHLVSA_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8672485351562	2	590.867289	1179.72002	-0.76513	-0.00045209	-0.7988	-0.00047199	-1.5639	-0.00092408	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.6116	3	11450	11384;11450;11474		49.442	18.938	1	54208000	+		50640	15798	33975	33988	57185;57186;57187	57186					0.13735296028130506
RRKLTHLVSA	10	Unmodified	_RRKLTHLVSA_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.866455078125	2	590.867289	1179.72002	0.84845	0.00050132	-2.4301	-0.0014359	-1.5816	-0.00093454	590.8659456342917	103.23	3.6732	103.41	102.97	106.64	0.18298					308	92	6	0	0	0	0.74274	2	11010	11010;11022		42.396	6.7778	1	94771000	+		50641	15798	33975	33988	57188;57189	57188					0.13735296028130506
RRKLTHLVSA	10	Unmodified	_RRKLTHLVSA_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.8668212890625	2	590.867289	1179.72002	0.89156	0.00052679	-2.3999	-0.001418	-1.5084	-0.00089125	590.8659491612801	103.33	3.6598	103.45	102.97	106.63	0.12622					310	91	6	0	0	0	0.8608	3	10883	10883;11137;11186		34.173	5.023	1	84183000	+		50642	15798	33975	33988	57190;57191;57192	57190					0.13735296028130506
RRKLTHLVSA	10	Unmodified	_RRKLTHLVSA_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8667602539062	2	590.867289	1179.72002	-1.319	-0.00077937	-0.16176	-9.558E-05	-1.4808	-0.00087495	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.5766	1	10943	10943		51.335	8.9393	1	81379000	+		50643	15798	33975	33988	57193	57193					0.13735296028130506
RRKLTHLVSA	10	Unmodified	_RRKLTHLVSA_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8671875	2	590.867289	1179.72002	3.2055	0.001894	-4.0778	-0.0024095	-0.87234	-0.00051544	590.8651655740615	103.14	2.9025	103.41	103.08	105.98	0.26524					177	73	4	0	0	0	0.8651	1	12617	12617		25.574	3.6142	1	6398400	+		50644	15798	33975	33988	57194	57194					0.13735296028130506
RRKLVLQDAL	10	Unmodified	_RRKLVLQDAL_					0	0	0			REV__ENSG00000062582|ENST00000317534|MRPS24	REV__ENSG00000062582|ENST00000317534|MRPS24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.923828125	3	404.59094	1210.75099	-1.2934	-0.00052329	-3.8685	-0.0015652	-5.1619	-0.0020885	404.5892229323439	41.136	1.2646	41.095	40.508	41.772	-0.04081					80	34	3	0	0	0	0.85086	1	3035	3035		19.263	0.73163	1	339150	+		50645	16463	33976	33989	57195	57195					0.15404449342372573
RRKMKRTKRKR	11	Unmodified	_RRKMKRTKRKR_					0	0	0		ENST00000297788.8_2_7:128455827-128457854:+|nuORF	ENST00000297788.8_2_7:128455827-128457854:+|nuORF	ENST00000297788.8_2_7:128455827-128457854:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.3358764648438	3	515.335321	1542.98413	0.33745	0.0001739	-0.19947	-0.00010279	0.13798	7.1106E-05	515.3352593898333	18.62	0.61042	17.999	17.631	18.241	-0.62141					25	13	3	0	0	0	0.18258	1	397	397		2.8518	0	1	145730			50646	9767	33977	33990	57196	57196					0.23436227581009916
RRKMKRTKRKR	11	Unmodified	_RRKMKRTKRKR_					0	0	0		ENST00000297788.8_2_7:128455827-128457854:+|nuORF	ENST00000297788.8_2_7:128455827-128457854:+|nuORF	ENST00000297788.8_2_7:128455827-128457854:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	515.335321	1542.98413	0.096318	4.9636E-05	5.2626	0.002712	5.3589	0.0027616	515.6713384501669	17.751	0.23377	17.813	17.701	17.934	0.062603	-0.12345	0.0078824	NaN	5.1424	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88439			50647	9767	33977	33990							0.23436227581009916
RRKMKRTKRKR	11	Unmodified	_RRKMKRTKRKR_					0	0	0		ENST00000297788.8_2_7:128455827-128457854:+|nuORF	ENST00000297788.8_2_7:128455827-128457854:+|nuORF	ENST00000297788.8_2_7:128455827-128457854:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	515.335321	1542.98413	0.93622	0.00048247	-1.358	-0.00069984	-0.42181	-0.00021737	515.3347365010707	18.475	0.60701	17.999	17.657	18.264	-0.47694	0.061595	-0.0023531	NaN	5.1424	30	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89631			50648	9767	33977	33990							0.23436227581009916
RRKMVLVF	8	Unmodified	_RRKMVLVF_					0	0	0			REV__chr13:87672825-87675381|28|19.89|0.2|6.63|+|ENST00000325089|SLITRK5,SLITRK5	REV__chr13:87672825-87675381|28|19.89|0.2|6.63|+|ENST00000325089|SLITRK5,SLITRK5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8269653320312	2	524.826047	1047.63754	-0.1321	-6.933E-05	1.5592	0.00081829	1.4271	0.00074896	524.8267772586088	99.003	3.4379	99.226	98.52	101.96	0.22263					298	81	5	0	0	0	0.80963	2	10628	10419;10628		28.254	1.4582	1	31133000	+		50649	15581	33978	33991	57197;57198	57198					0.11562682695648618
RRKNPLLRK	9	Unmodified	_RRKNPLLRK_					0	0	0		nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;ENSG00000061273|ENST00000080059|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7	nc|ENSG00000061273|Q8WUI4-3|HDAC7	nc|ENSG00000061273|Q8WUI4-3|HDAC7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8663940429688	2	590.891098	1179.76764	-0.6443	-0.00038071	1.98	0.00117	1.3357	0.00078926	590.8924121246905	103.76	0.65023	103.76	103.55	104.2	-0.0035706					23	15	2	0	0	0	0.20789	1	11230	11230		47.916	22.342	1	257200			50650	1072	33979	33992	57199	57199					0.18494995018954796
RRKPKILP	8	Unmodified	_RRKPKILP_					0	0	0			REV__nc|ENSG00000179348|P23769-2|GATA2;REV__nc|ENSG00000107485|P23771|GATA3	REV__nc|ENSG00000107485|P23771|GATA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3480529785156	2	504.345461	1006.67637	1.8375	0.00092675	3.6855	0.0018588	5.5231	0.0027855	504.347172191427	34.679	1.3601	35.06	34.73	36.09	0.3812					85	34	4	0	0	0	0.82419	1	2632	2632		13.775	0	1	1730500	+		50651	30066;17659	33980	33993	57200	57200					0.17329731321649433
RRKPKKSFT	9	Unmodified	_RRKPKKSFT_					0	0	0			REV__ENSG00000236287|ENST00000413761|ZBED5	REV__ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3555297851562	2	574.356557	1146.69856	-1.0357	-0.00059487	-0.061954	-3.5583E-05	-1.0977	-0.00063045	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.58668	2	10548	10548;10579		47.657	6.8792	1	715310	+		50652	23788	33981	33994	57201;57202	57201					0.13107910999406158
RRKPKKSFT	9	Unmodified	_RRKPKKSFT_					0	0	0			REV__ENSG00000236287|ENST00000413761|ZBED5	REV__ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3560180664062	2	574.356557	1146.69856	1.1071	0.0006359	-2.2805	-0.0013098	-1.1733	-0.0006739	574.3551428715639	99.749	3.8071	99.797	97.578	101.39	0.047523					167	88	2	0	0	0	0.7932	1	10715	10715		26.693	1.1189	1	708140	+		50653	23788	33981	33994	57203	57203					0.13107910999406158
RRKPNHKL	8	Unmodified	_RRKPNHKL_					0	0	0			REV__nc|ENSG00000124422|Q9UPT9-2|USP22	REV__nc|ENSG00000124422|Q9UPT9-2|USP22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8275756835938	2	524.827966	1047.64138	-0.038995	-2.0466E-05	-2.0451	-0.0010733	-2.0841	-0.0010938	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.81548	9	10677	10498;10510;10546;10594;10606;10653;10665;10677;10714		33.516	5.0938	1	26414000	+		50654	15649	33982	33995	57204;57205;57206;57207;57208;57209;57210;57211;57212	57211					0.1194648851369493
RRKPNHKL	8	Unmodified	_RRKPNHKL_					0	0	0			REV__nc|ENSG00000124422|Q9UPT9-2|USP22	REV__nc|ENSG00000124422|Q9UPT9-2|USP22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8271484375	2	524.827966	1047.64138	1.2413	0.00065145	-3.3929	-0.0017807	-2.1517	-0.0011293	524.8261082044575	99.092	3.5228	99.14	98.41	101.93	0.047852					344	82	7	0	0	0	0.86288	4	10558	10558;10582;10594;10606		33.516	5.0938	1	29910000	+		50655	15649	33982	33995	57213;57214;57215;57216	57213					0.1194648851369493
RRKPNHKL	8	Unmodified	_RRKPNHKL_					0	0	0			REV__nc|ENSG00000124422|Q9UPT9-2|USP22	REV__nc|ENSG00000124422|Q9UPT9-2|USP22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8270263671875	2	524.827966	1047.64138	-0.1321	-6.933E-05	-2.099	-0.0011016	-2.2311	-0.001171	524.8267772586088	99.003	3.4379	99.226	98.52	101.96	0.22263					298	81	5	0	0	0	0.86288	10	10265	10253;10265;10277;10289;10301;10337;10361;10384;10407;10467		42.474	8.3019	1	31133000	+		50656	15649	33982	33995	57217;57218;57219;57220;57221;57222;57223;57224;57225;57226	57218					0.1194648851369493
RRKPNHKL	8	Unmodified	_RRKPNHKL_					0	0	0			REV__nc|ENSG00000124422|Q9UPT9-2|USP22	REV__nc|ENSG00000124422|Q9UPT9-2|USP22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8272705078125	2	524.827966	1047.64138	0.8139	0.00042716	-2.8534	-0.0014975	-2.0395	-0.0010704	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.81548	11	10424	10268;10328;10340;10352;10364;10388;10400;10412;10424;10436;10449		35.201	6.7195	1	27719000	+		50657	15649	33982	33995	57227;57228;57229;57230;57231;57232;57233;57234;57235;57236;57237	57235					0.1194648851369493
RRKPNHKL	8	Unmodified	_RRKPNHKL_					0	0	0			REV__nc|ENSG00000124422|Q9UPT9-2|USP22	REV__nc|ENSG00000124422|Q9UPT9-2|USP22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8269653320312	2	524.827966	1047.64138	-1.5341	-0.00080515	-0.51612	-0.00027087	-2.0502	-0.001076	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.884	1	10327	10327		33.516	4.366	1	23918000	+		50658	15649	33982	33995	57238	57238					0.1194648851369493
RRKPNHKL	8	Unmodified	_RRKPNHKL_					0	0	0			REV__nc|ENSG00000124422|Q9UPT9-2|USP22	REV__nc|ENSG00000124422|Q9UPT9-2|USP22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.8275146484375	2	524.827966	1047.64138	1.8774	0.00098533	-3.1078	-0.0016311	-1.2304	-0.00064574	524.826216538819	98.943	2.7054	99.306	98.811	101.52	0.36292					220	67	4	0	0	0	0.86288	1	11958	11958		26.796	5.0938	1	11934000	+		50659	15649	33982	33995	57239	57239					0.1194648851369493
RRKPRVHRPRS	11	Unmodified	_RRKPRVHRPRS_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	482.2987976074219	3	482.299265	1443.87596	-0.7586	-0.00036587	-0.17611	-8.4937E-05	-0.93471	-0.00045081	482.29902330423846	107.84	0.32388	107.98	107.77	108.1	0.13866					29	8	5	0	0	0	0.75121	1	11589	11589		21.78	2.5177	1	55853000			50660	6691	33983	33996	57240	57240					0.1717817932210437
RRKPRVHRPRS	11	Unmodified	_RRKPRVHRPRS_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	482.299072265625	3	482.299265	1443.87596	-1.6726	-0.00080671	1.739	0.00083873	0.066398	3.2024E-05	482.29995396254543	107.88	0.34956	107.92	107.62	107.97	0.036125					23	8	4	0	0	0	0.75121	1	11526	11526		21.78	3.2494	1	27330000			50661	6691	33983	33996	57241	57241					0.1717817932210437
RRKPRVHRPRS	11	Unmodified	_RRKPRVHRPRS_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	482.299265	1443.87596	0.7855	0.00037884	-1.2558	-0.00060567	-0.47031	-0.00022683	482.29854956205384	107.88	0.55867	107.96	107.45	108.01	0.084412	0.0053263	-0.00024084	NaN	21.78	32	13	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43056000			50662	6691	33983	33996							0.1717817932210437
RRKPRVHRPRS	11	Unmodified	_RRKPRVHRPRS_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	482.299265	1443.87596	2.3191	0.0011185	-3.1855	-0.0015364	-0.86648	-0.0004179	482.63209608131376	107.86	0.24143	107.95	107.77	108.01	0.084457	-0.0049673	-0.003033	NaN	21.78	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2313500			50663	6691	33983	33996							0.1717817932210437
RRKPRVHRPRS	11	Unmodified	_RRKPRVHRPRS_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	482.299265	1443.87596	4.2724	0.0020606	-4.6848	-0.0022595	-0.41236	-0.00019888	482.2970034934238	107.85	0.18205	107.97	107.81	107.99	0.11716	0.012749	-0.0052022	NaN	21.78	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3002700			50664	6691	33983	33996							0.1717817932210437
RRKPVPGPLGS	11	Unmodified	_RRKPVPGPLGS_					0	0	0		ENST00000606448.1_1_13:103047077-103047416:+|nuORF	ENST00000606448.1_1_13:103047077-103047416:+|nuORF	ENST00000606448.1_1_13:103047077-103047416:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353759765625	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.73893	1	12472	12472		24.519	0	1	3937500			50665	14450	33984	33997	57242	57242					0.11863607136797327
RRKQHSLLKRL	11	Unmodified	_RRKQHSLLKRL_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9743957519531	3	478.975788	1433.90553	-0.79395	-0.00038028	-1.9266	-0.0009228	-2.7206	-0.0013031	478.9747699681175	46.852	2.0236	46.823	45.583	47.607	-0.028782					130	52	3	0	0	0	0.77205	1	3821	3821		17.167	10.846	1	237090			50666	2828	33985	33998	57243	57243					0.2059369854760007
RRKQHSLLKRL	11	Unmodified	_RRKQHSLLKRL_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9745788574219	3	478.975788	1433.90553	0.29105	0.00013941	-3.0181	-0.0014456	-2.7271	-0.0013062	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.79224	2	3340	3340;3495		12.957	6.2979	1	395190			50667	2828	33985	33998	57244;57245	57244					0.2059369854760007
RRKQHSLLKRL	11	Unmodified	_RRKQHSLLKRL_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3056945800781	3	478.975788	1433.90553	0.35245	0.00016881	-3.2435	-0.0015536	-2.8911	-0.0013847	478.9741095971511	52.816	1.6716	52.886	52.36	54.032	0.070713					123	47	3	0	0	0	0.79945	1	4412	4412		11.455	3.4203	1	295530			50668	2828	33985	33998	57246	57246					0.2059369854760007
RRKRAAAAHKS	11	Unmodified	_RRKRAAAAHKS_					0	0	0			REV__nc|ENSG00000145506|Q969F2-2|NKD2	REV__nc|ENSG00000145506|Q969F2-2|NKD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.9223937988281	3	417.921683	1250.74322	2.7179	0.0011359	-1.2598	-0.00052649	1.4581	0.00060938	417.9211507262476	105.91	2.7799	105.88	105.06	107.84	-0.03714					241	65	4	0	0	0	0.75457	2	11734	11734;11784		21.032	2.5012	1	23169000	+		50669	19950	33986	33999	57247;57248	57247					0.1278773486544651
RRKRIQPTQ	9	Unmodified	_RRKRIQPTQ_					0	0	0			REV__ENSG00000095951|ENST00000379388|HIVEP1	REV__ENSG00000095951|ENST00000379388|HIVEP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.8648681640625	2	591.862538	1181.71052	0.22841	0.00013518	2.8018	0.0016583	3.0302	0.0017934	591.8643633910696	36.472	1.3667	36.754	35.89	37.257	0.28173					67	33	3	0	0	0	0.28163	1	2885	2885		66.429	6.311	1	1105800	+		50670	17071	33987	34000	57249	57249					0.1269352774259005
RRKRKGLL	8	Unmodified	_RRKRKGLL_					0	0	0			REV__ENSG00000176714|ENST00000324364|CCDC121	REV__ENSG00000176714|ENST00000324364|CCDC121	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.8654174804688	2	513.853984	1025.69342	1.1301	0.00058073	3.2383	0.001664	4.3685	0.0022447	514.3559224313822	23.145	0.68463	22.571	22.409	23.094	-0.57415					19	16	2	0	0	0	0.4196	1	1009	1009		28.254	17.389	1	21264	+		50671	22143	33988	34001	57250	57250					0.18159651927453524
RRKRLLPIRSR	11	Unmodified	_RRKRLLPIRSR_					0	0	0			REV__ENSG00000230358|ENST00000424157|SPDYE21;REV__nc|ENSG00000205238|Q495Y8-2|SPDYE2	REV__nc|ENSG00000205238|Q495Y8-2|SPDYE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.3260192871094	3	484.323299	1449.94807	0.066125	3.2026E-05	1.5368	0.00074429	1.6029	0.00077632	484.3241118198103	15.478	0.14655	15.536	15.437	15.583	0.057872					12	4	3	0	0	0	0.85873	1	40	40		5.4129	2.0042	1	194380	+		50672	23756;21942	33989	34002	57251	57251					0.2410909367581553
RRKRPAAPE	9	Unmodified	_RRKRPAAPE_					0	0	0			REV__ENST00000336617.7_1_13:51483970-51501548:+|nuORF	REV__ENST00000336617.7_1_13:51483970-51501548:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.82470703125	2	540.822881	1079.63121	-0.10264	-5.5508E-05	3.0906	0.0016715	2.9879	0.0016159	540.8243714095667	33.211	1.5239	33.381	32.46	33.984	0.16971					51	35	3	0	0	0	0.62081	1	2378	2378		45.952	1.8352	1	1044900	+		50673	25194	33990	34003	57252	57252					0.09457880788454531
RRKRPAAPE	9	Unmodified	_RRKRPAAPE_					0	0	0			REV__ENST00000336617.7_1_13:51483970-51501548:+|nuORF	REV__ENST00000336617.7_1_13:51483970-51501548:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	540.822881	1079.63121	0.47364	0.00025615	-2.3956	-0.0012956	-1.922	-0.0010394	541.3234732382114	33.028	0.092323	32.995	32.954	33.047	-0.032677	-0.27058	-0.0043247	NaN	45.952	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94103	+		50674	25194	33990	34003							0.09457880788454531
RRKRQVYG	8	Unmodified	_RRKRQVYG_					0	0	0		ENSG00000146250|ENST00000369700|PRSS35	ENSG00000146250|ENST00000369700|PRSS35	ENSG00000146250|ENST00000369700|PRSS35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.816650390625	2	531.817599	1061.62064	-1.4587	-0.00077575	0.042507	2.2606E-05	-1.4162	-0.00075314	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.87276	1	8567	8567		29.842	0.69198	1	1159800			50675	4830	33991	34004	57253	57253					0.09229898134049108
RRKRRPPR	8	Unmodified	_RRKRRPPR_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-2|AUTS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.3634643554688	2	561.365582	1120.71661	-1.2272	-0.00068889	-1.9495	-0.0010944	-3.1767	-0.0017833	561.3643862619919	45.972	0.98896	45.972	45.502	46.491	0					58	25	3	0	0	0	0.86288	1	3414	3414		26.796	5.8492	1	208060	+		50676	20602	33992	34005	57254	57254					0.161080907647829
RRKRRQGWLFL	11	Unmodified	_RRKRRQGWLFL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.9735107421875	3	505.975899	1514.90587	0.14933	7.5555E-05	-3.3299	-0.0016849	-3.1806	-0.0016093	505.97413818936155	107.88	0.86302	107.92	107.11	107.97	0.035622					68	20	5	0	0	0	0.80813	1	11869	11869		9.6461	0.84683	1	155850000			50677	14386	33993	34006	57255	57255					0.1690111826744669
RRKRRQGWLFL	11	Unmodified	_RRKRRQGWLFL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.9737854003906	3	505.975899	1514.90587	-0.41054	-0.00020772	-2.4332	-0.0012312	-2.8438	-0.0014389	505.97449644983624	111.63	0.41888	111.74	111.42	111.83	0.11118					16	11	2	0	0	0	0.78683	1	12031	12031		14.086	5.6788	1	2847800			50678	14386	33993	34006	57256	57256					0.1690111826744669
RRKRRQGWLFL	11	Unmodified	_RRKRRQGWLFL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3087463378906	3	505.975899	1514.90587	-1.5955	-0.00080729	-1.6675	-0.00084369	-3.263	-0.001651	506.309131074755	113.32	6.698	113.27	113.24	119.94	-0.044777					363	158	3	0	0	0	0.8398	2	12126	12126;12245		6.6596	0.96083	1	2142200			50679	14386	33993	34006	57257;57258	57257					0.1690111826744669
RRKRRQGWLFL	11	Unmodified	_RRKRRQGWLFL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	505.975899	1514.90587	-0.68651	-0.00034736	-2.2998	-0.0011636	-2.9863	-0.001511	505.97465755410053	111.57	0.65765	111.57	111.27	111.93	0	0.079162	-0.00017146	NaN	14.086	40	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50943			50680	14386	33993	34006							0.1690111826744669
RRKRRQGWLFL	11	Unmodified	_RRKRRQGWLFL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	505.975899	1514.90587	-0.056948	-2.8814E-05	-2.8528	-0.0014435	-2.9098	-0.0014723	505.9745171830014	111.38	0.89307	111.32	111.14	112.03	-0.059937	-0.17528	-0.0010109	NaN	14.086	60	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189090			50681	14386	33993	34006							0.1690111826744669
RRKRRQGWLFL	11	Unmodified	_RRKRRQGWLFL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	505.975899	1514.90587	0.14394	7.2832E-05	-2.8503	-0.0014422	-2.7064	-0.0013693	505.97431446873105	111.49	0.76781	111.52	111.29	112.06	0.030388	0.026765	-0.0010071	NaN	14.086	61	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38212			50682	14386	33993	34006							0.1690111826744669
RRKRRQGWLFL	11	Unmodified	_RRKRRQGWLFL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	505.975899	1514.90587	-1.5955	-0.0008073	-1.1533	-0.00058353	-2.7488	-0.0013908	505.9751375786138	111.34	0.60958	111.32	111.22	111.83	-0.019882	-0.17862	0.0015689	NaN	14.086	59	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115940			50683	14386	33993	34006							0.1690111826744669
RRKRRTKQWRR	11	Unmodified	_RRKRRTKQWRR_					0	0	0		ENST00000272342.5_1_2:67624599-67624692:+|nuORF	ENST00000272342.5_1_2:67624599-67624692:+|nuORF	ENST00000272342.5_1_2:67624599-67624692:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.7286376953125	4	407.505458	1625.99273	-1.8354	-0.00074792	-2.6859	-0.0010945	-4.5212	-0.0018424	407.5044127092848	76.612	0.51141	76.737	76.321	76.833	0.12486					26	17	2	0	0	0	0.18415	1	7148	7148		2.8518	1.4331	1	74913			50684	9566	33994	34007	57259	57259					0.20476917541827788
RRKRRTKQWRR	11	Unmodified	_RRKRRTKQWRR_					0	0	0		ENST00000272342.5_1_2:67624599-67624692:+|nuORF	ENST00000272342.5_1_2:67624599-67624692:+|nuORF	ENST00000272342.5_1_2:67624599-67624692:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		4	407.505458	1625.99273	-1.52	-0.00061943	-3.4197	-0.0013936	-4.9398	-0.002013	407.5041888408571	76.511	0.37509	76.601	76.44	76.816	0.089363	-0.068139	-0.0010833	NaN	2.8518	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90626			50685	9566	33994	34007							0.20476917541827788
RRKRRVVTKAY	11	Unmodified	_RRKRRVVTKAY_					0	0	0		ENST00000471423.1_1_1:151158258-151162597:-|nuORF;ENSG00000163159|ENST00000368892|VPS72;nc|ENSG00000163159|Q15906-2|VPS72	ENST00000471423.1_1_1:151158258-151162597:-|nuORF	ENST00000471423.1_1_1:151158258-151162597:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.302734375	3	478.303904	1431.88988	-0.10097	-4.8294E-05	-2.0098	-0.00096131	-2.1108	-0.0010096	478.302730378592	67.138	1.0775	67.155	66.828	67.905	0.016205					111	46	4	0	0	0	0.80593	1	6321	6321		10.104	0.45776	1	279890			50686	5773	33995	34008	57260	57260					0.19121412030563079
RRKRSPNN	8	Unmodified	_RRKRSPNN_					0	0	0			REV__ENST00000277225.9_3_9:109625513-109685652:+|nuORF	REV__ENST00000277225.9_3_9:109625513-109685652:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.2979125976562	2	514.29703	1026.57951	-1.5684	-0.00080663	3.3522	0.0017241	1.7838	0.00091742	514.2990007980452	96.402	2.2846	96.604	95.027	97.312	0.20242					111	53	3	0	0	0	0.88601	1	9834	9834		34.173	0.65696	1	524360	+		50687	24586	33996	34009	57261	57261					0.0672813709456932
RRKRSQKELLN	11	Unmodified	_RRKRSQKELLN_					0	0	0		nc|ENSG00000291035|Q9NSQ0|RRP7BP;ENST00000357802.6_1_22:42970741-42976277:-|nuORF	nc|ENSG00000291035|Q9NSQ0|RRP7BP	nc|ENSG00000291035|Q9NSQ0|RRP7BP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.62384033203125	3	476.623303	1426.84808	-0.10097	-4.8125E-05	-0.067503	-3.2173E-05	-0.16847	-8.0299E-05	476.6231885289285	107.88	0.27552	107.84	107.65	107.93	-0.042404					27	6	6	0	0	0	0.77803	1	11757	11757		15.921	2.4127	1	124990000			50688	10395	33997	34010	57262	57262					0.15172811551383347
RRKRSQKELLN	11	Unmodified	_RRKRSQKELLN_					0	0	0		nc|ENSG00000291035|Q9NSQ0|RRP7BP;ENST00000357802.6_1_22:42970741-42976277:-|nuORF	nc|ENSG00000291035|Q9NSQ0|RRP7BP	nc|ENSG00000291035|Q9NSQ0|RRP7BP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.62396240234375	3	476.623303	1426.84808	2.8112	0.0013399	-1.9889	-0.00094794	0.82234	0.00039195	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.75779	1	13158	13158		20.315	4.9775	1	2689700			50689	10395	33997	34010	57263	57263					0.15172811551383347
RRKRSQKELLN	11	Unmodified	_RRKRSQKELLN_					0	0	0		nc|ENSG00000291035|Q9NSQ0|RRP7BP;ENST00000357802.6_1_22:42970741-42976277:-|nuORF	nc|ENSG00000291035|Q9NSQ0|RRP7BP	nc|ENSG00000291035|Q9NSQ0|RRP7BP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6239929199219	3	476.623303	1426.84808	-1.6911	-0.00080602	2.7152	0.0012941	1.0241	0.00048811	476.6245112219867	107.85	0.64255	107.89	107.33	107.97	0.036118					45	15	6	0	0	0	0.77511	1	11517	11517		16.53	3.0219	1	137120000			50690	10395	33997	34010	57264	57264					0.15172811551383347
RRKRSTRSNT	10	Unmodified	_RRKRSTRSNT_					0	0	0		ENST00000509799.5_1_5:124080839-124084286:-|nuORF	ENST00000509799.5_1_5:124080839-124084286:-|nuORF	ENST00000509799.5_1_5:124080839-124084286:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.2431335449219	3	421.244714	1260.71231	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.272	1	76.272	75.772	76.772	0								0	0	0	0.45132	1	6943	6943		30.569	10.254	1				50691	12997	33998	34011	57265	57265					0.09238536760562965
RRKRVKWFCRL	11	Unmodified	_RRKRVKWFCRL_					0	0	0			REV__ENST00000526688.1_1_8:38269909-38271480:-|nuORF	REV__ENST00000526688.1_1_8:38269909-38271480:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.30859375	3	516.645384	1546.91432	-0.25263	-0.00013052	-0.52163	-0.0002695	-0.77426	-0.00040002	516.6441857328823	104.29	1.6081	104.47	103.73	105.33	0.17096					54	39	2	0	0	0	0.18216	1	11002	11002		9.6461	6.2374	1	209030	+		50692	28217	33999	34012	57266	57266					0.16274348912406822
RRKRVKWFCRL	11	Unmodified	_RRKRVKWFCRL_					0	0	0			REV__ENST00000526688.1_1_8:38269909-38271480:-|nuORF	REV__ENST00000526688.1_1_8:38269909-38271480:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	516.645384	1546.91432	-0.046493	-2.402E-05	2.6797	0.0013844	2.6332	0.0013604	517.316657063194	104.91	1.3876	104.9	104.28	105.67	-0.014816	0.17107	0.0042863	NaN	9.6461	93	32	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173100	+		50693	28217	33999	34012							0.16274348912406822
RRKRVKWFCRL	11	Unmodified	_RRKRVKWFCRL_					0	0	0			REV__ENST00000526688.1_1_8:38269909-38271480:-|nuORF	REV__ENST00000526688.1_1_8:38269909-38271480:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	516.645384	1546.91432	0.89138	0.00046053	-0.041864	-2.1629E-05	0.84952	0.0004389	516.9808709918264	104.76	1.9241	104.8	103.67	105.59	0.039864	0.069975	6.8065E-05	NaN	9.6461	62	45	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	166340	+		50694	28217	33999	34012							0.16274348912406822
RRKRVKWFCRL	11	Unmodified	_RRKRVKWFCRL_					0	0	0			REV__ENST00000526688.1_1_8:38269909-38271480:-|nuORF	REV__ENST00000526688.1_1_8:38269909-38271480:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	516.645384	1546.91432	2.1962	0.0011347	-2.5671	-0.0013263	-0.37084	-0.00019159	516.9794593540663	104.86	0.32126	105.02	104.86	105.18	0.15584	0.29058	-0.0038459	NaN	9.6461	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31346	+		50695	28217	33999	34012							0.16274348912406822
RRKRVYLD	8	Unmodified	_RRKRVYLD_					0	0	0		ENST00000552912.5_1_12:110618329-110628779:+|nuORF	ENST00000552912.5_1_12:110618329-110628779:+|nuORF	ENST00000552912.5_1_12:110618329-110628779:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3325805664062	2	553.333082	1104.65161	1.115	0.00061697	-2.2699	-0.001256	-1.1549	-0.00063904	553.3316729497465	96.557	1.6944	96.962	96.464	98.158	0.40498					120	40	4	0	0	0	0.87479	1	11545	11545		30.504	7.924	1	3081200			50696	13688	34000	34013	57267	57267					0.10347051448275124
RRKSIVDT	8	Unmodified	_RRKSIVDT_					0	0	0		nc|ENSG00000132294|Q14156-3|EFR3A;ENSG00000132294|ENST00000254624|EFR3A;ENST00000519920.1_1_8:132996397-133013042:+|nuORF;nc|ENSG00000132294|Q14156-2|EFR3A	nc|ENSG00000132294|Q14156-3|EFR3A	nc|ENSG00000132294|Q14156-3|EFR3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7904968261719	2	487.790715	973.566878	-1.0855	-0.00052952	0.66797	0.00032583	-0.41757	-0.00020369	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.86288	1	7764	7764		26.796	2.5934	1	309700			50697	3776	34001	34014	57268	57268					0.07903680911670108
RRKSLKSH	8	Unmodified	_RRKSLKSH_					0	0	0		ENSG00000143512|ENST00000343410|HHIPL2	ENSG00000143512|ENST00000343410|HHIPL2	ENSG00000143512|ENST00000343410|HHIPL2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3109436035156	2	506.312149	1010.60975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.051	1	64.081	63.581	64.581	0.030243								0	0	0	0.3037	1	5627	5627		18.324	0.95945	1				50698	4639	34002	34015	57269	57269					0.10486495759755599
RRKTITNRKH	10	Unmodified	_RRKTITNRKH_					0	0	0			REV__ENSG00000146247|ENST00000275034|PHIP	REV__ENSG00000146247|ENST00000275034|PHIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.267822265625	3	437.268971	1308.78508	-1.575	-0.00068869	-0.91628	-0.00040066	-2.4913	-0.0010893	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.86446	1	3974	3974		30.569	1.9921	1	3429700	+		50699	20000	34003	34016	57270	57270					0.14304290553968713
RRKVGNNLQRL	11	Unmodified	_RRKVGNNLQRL_					0	0	0		ENSG00000080986|ENST00000261597|NDC80	ENSG00000080986|ENST00000261597|NDC80	ENSG00000080986|ENST00000261597|NDC80	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.94329833984375	3	451.944376	1352.8113	-0.67633	-0.00030566	-1.9317	-0.00087303	-2.6081	-0.0011787	451.94335598806316	53.501	2.9355	53.476	51.367	54.303	-0.024754					205	72	4	0	0	0	0.76579	1	4670	4670		18.531	1.3643	1	765750			50700	1456	34004	34017	57271	57271					0.14900559725469975
RRKVGNNLQRL	11	Unmodified	_RRKVGNNLQRL_					0	0	0		ENSG00000080986|ENST00000261597|NDC80	ENSG00000080986|ENST00000261597|NDC80	ENSG00000080986|ENST00000261597|NDC80	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.94293212890625	3	451.944376	1352.8113	0.3266	0.00014761	-3.1108	-0.0014059	-2.7842	-0.0012583	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.76892	1	4267	4267		17.833	1.3033	1	721610			50701	1456	34004	34017	57272	57272					0.14900559725469975
RRKVLPLARLV	11	Unmodified	_RRKVLPLARLV_					0	0	0		ENST00000506763.5_1_4:2243363-2243819:-|nuORF	ENST00000506763.5_1_4:2243363-2243819:-|nuORF	ENST00000506763.5_1_4:2243363-2243819:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78790283203125	3	440.969863	1319.88776	-0.30266	-0.00013346	-3.9758	-0.0017532	-4.2785	-0.0018867	440.9674875317538	37.738	0.22135	38.051	37.942	38.163	0.31312					7	5	2	0	0	0	0.18287	1	3043	3043		6.6596	0.96083	1	97232			50702	12943	34005	34018	57273	57273					0.24060983292724814
RRKVSLAVM	9	Oxidation (M)	_RRKVSLAVM(Oxidation (M))_		RRKVSLAVM(1)		RRKVSLAVM(57)	0	0	1			REV__ENST00000247461.8_1_5:179153698-179155607:+|nuORF	REV__ENST00000247461.8_1_5:179153698-179155607:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3272094726562	2	538.323868	1074.63318	1.8602	0.0010014	3.8329	0.0020633	5.693	0.0030647	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.41566	1	12276	12276		56.721	12.604	1	19391000	+		50703	24267	34006	34019	57274	57274		379			0.09885173482030041
RRKVTGQHKR	10	Unmodified	_RRKVTGQHKR_					0	0	0			REV__ENSG00000013619|ENST00000370401|MAMLD1	REV__ENSG00000013619|ENST00000370401|MAMLD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.592529296875	3	422.593566	1264.75887	-1.7406	-0.00073557	-0.38953	-0.00016461	-2.1301	-0.00090018	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.86621	1	3959	3959		26.063	0.9374	1	1126900	+		50704	16200	34007	34020	57275	57275					0.13708021382512925
RRKVWRLTSSR	11	Unmodified	_RRKVWRLTSSR_					0	0	0			REV__ENSG00000124251|ENST00000372726|TP53TG5	REV__ENSG00000124251|ENST00000372726|TP53TG5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.2908935546875	3	482.291776	1443.8535	-0.17598	-8.4875E-05	2.4024	0.0011586	2.2264	0.0010738	482.2921180539914	16.781	0.47096	16.17	15.958	16.429	-0.6107					24	10	4	0	0	0	0.76579	1	172	172		18.531	6.8951	1	175420	+		50705	18575	34008	34021	57276	57276					0.1493253513383479
RRKWFPRRRT	10	Unmodified	_RRKWFPRRRT_					0	0	0			REV__nc|ENSG00000116698|Q92540-4|SMG7	REV__nc|ENSG00000116698|Q92540-4|SMG7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.9585876464844	3	486.96036	1457.85925	-0.68916	-0.0003356	-2.0454	-0.00099605	-2.7346	-0.0013316	486.95912437629556	102.63	1.2663	102.82	102.18	103.44	0.19484					77	31	5	0	0	0	0.888	1	10815	10815		11.097	0.95223	1	378820	+		50706	29796	34009	34022	57277	57277					0.14863678436131522
RRKWIRYRRYK	11	Unmodified	_RRKWIRYRRYK_					0	0	0		nc|ENSG00000205356|Q7Z6L1-3|TECPR1;ENSG00000205356|ENST00000447648|TECPR1;nc|ENSG00000205356|Q7Z6L1-2|TECPR1;nc|ENSG00000205356|Q7Z6L1-4|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.4011840820312	3	561.00597	1679.99608	4.9299	0.0027657	-2.3522	-0.0013196	2.5777	0.0014461	561.3384364510498	107.79	0.40053	107.91	107.54	107.94	0.11715					23	17	2	0	0	0	0.18425	1	13185	13185		0.3405	0	1	511130			50707	8527	34010	34023	57278	57278					0.18328167595859668
RRKWIRYRRYK	11	Unmodified	_RRKWIRYRRYK_					0	0	0		nc|ENSG00000205356|Q7Z6L1-3|TECPR1;ENSG00000205356|ENST00000447648|TECPR1;nc|ENSG00000205356|Q7Z6L1-2|TECPR1;nc|ENSG00000205356|Q7Z6L1-4|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	561.00597	1679.99608	-1.1594	-0.00065045	5.8787	0.003298	4.7192	0.0026475	561.3439333766698	107.8	0.29462	107.76	107.52	107.82	-0.042404	-0.096282	0.0080077	NaN	0.3405	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	331360			50708	8527	34010	34023							0.18328167595859668
RRKWIRYRRYK	11	Unmodified	_RRKWIRYRRYK_					0	0	0		nc|ENSG00000205356|Q7Z6L1-3|TECPR1;ENSG00000205356|ENST00000447648|TECPR1;nc|ENSG00000205356|Q7Z6L1-2|TECPR1;nc|ENSG00000205356|Q7Z6L1-4|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	561.00597	1679.99608	1.3965	0.00078346	4.6372	0.0026015	6.0337	0.0033849	561.3432240771094	107.83	0.42608	107.86	107.47	107.9	0.035622	0.0079355	0.0059182	NaN	0.3405	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1530900			50709	8527	34010	34023							0.18328167595859668
RRKWIRYRRYK	11	Unmodified	_RRKWIRYRRYK_					0	0	0		nc|ENSG00000205356|Q7Z6L1-3|TECPR1;ENSG00000205356|ENST00000447648|TECPR1;nc|ENSG00000205356|Q7Z6L1-2|TECPR1;nc|ENSG00000205356|Q7Z6L1-4|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	561.00597	1679.99608	2.5041	0.0014048	-1.0737	-0.00060236	1.4304	0.00080248	561.3392611166531	107.78	0.26656	107.89	107.64	107.9	0.10396	0.032037	-0.0036933	NaN	0.3405	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	432180			50710	8527	34010	34023							0.18328167595859668
RRKWLRISP	9	Unmodified	_RRKWLRISP_					0	0	0		ENST00000023939.8_1_20:55043665-55043737:+|nuORF	ENST00000023939.8_1_20:55043665-55043737:+|nuORF	ENST00000023939.8_1_20:55043665-55043737:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.5872497558594	3	404.587641	1210.74109	-1.5542	-0.00062879	3.6133	0.0014619	2.0591	0.0008331	404.58898093984646	40.193	1.0068	40.782	40.174	41.181	0.58915					65	25	4	0	0	0	0.7932	1	3423	3423		22.58	0.018069	1	1622000			50711	9069	34011	34024	57279	57279					0.14415306127648364
RRKWSQKRKYR	11	Unmodified	_RRKWSQKRKYR_					0	0	0		ENST00000589042.5_3_2:179517806-179527536:-|nuORF	ENST00000589042.5_3_2:179517806-179527536:-|nuORF	ENST00000589042.5_3_2:179517806-179527536:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.6544189453125	3	531.318325	1590.93315	3.7026	0.0019673	2.906	0.001544	6.6087	0.0035113	531.3187831183677	104.84	0.57112	105.07	104.8	105.37	0.2268					24	13	3	0	0	0	0.86283	1	12825	12825		5.1424	3.7236	1	204050			50712	14223	34012	34025	57280	57280					0.16131601807819607
RRKYIAKEGT	10	Unmodified	_RRKYIAKEGT_					0	0	0			REV__ENSG00000102763|ENST00000379310|VWA8	REV__ENSG00000102763|ENST00000379310|VWA8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.35546875	2	611.356754	1220.69895	-1.2523	-0.00076562	0.84173	0.0005146	-0.41059	-0.00025102	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.86763	1	9800	9800		26.693	0.62953	1	16503000	+		50713	17353	34013	34026	57281	57281					0.09743285928561818
RRKYLTNYWIP	11	Unmodified	_RRKYLTNYWIP_					0	0	0		ENST00000553688.5_1_14:35777271-35778147:+|nuORF	ENST00000553688.5_1_14:35777271-35778147:+|nuORF	ENST00000553688.5_1_14:35777271-35778147:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.2712097167969	3	503.949016	1508.82522	0.32998	0.00016629	-1.7325	-0.00087308	-1.4025	-0.00070679	504.2812721948229	53.079	0.1229	53.694	53.614	53.737	0.61436					4	2	2	0	0	0	0.18159	1	5354	5354		17.167	9.1324	1	53901			50714	13705	34014	34027	57282	57282					0.09115792433863135
RRLAAILN	8	Unmodified	_RRLAAILN_					0	0	0		ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1	ENSG00000009694|ENST00000371130|TENM1	ENSG00000009694|ENST00000371130|TENM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8000793457031	2	463.798343	925.582134	0.28206	0.00013082	4.2188	0.0019567	4.5009	0.0020875	463.8001612881591	41.523	1.5134	41.492	41.236	42.75	-0.030991					87	37	3	0	0	0	0.80706	1	3092	3092		19.36	0	1	527400			50715	755	34015	34028	57283	57283					0.1163659249950797
RRLAIQLG	8	Unmodified	_RRLAIQLG_					0	0	0		ENST00000466127.1_1_1:226109155-226109632:-|nuORF;ENSG00000143811|ENST00000343818|PYCR2	ENST00000466127.1_1_1:226109155-226109632:-|nuORF	ENST00000466127.1_1_1:226109155-226109632:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8000183105469	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.86288	1	3504	3504		26.796	0	1	1570500			50716	4664	34016	34029	57284	57284					0.11636592499530707
RRLANLAFILH	11	Unmodified	_RRLANLAFILH_					0	0	0			REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2711486816406	3	441.938451	1322.79352	-0.49593	-0.00021917	3.7819	0.0016714	3.286	0.0014522	441.9399207304678	55.239	1.1399	55.213	54.702	55.842	-0.026581					95	31	4	0	0	0	0.75906	1	4991	4991		20.03	2.8637	1	363460	+		50717	21876	34017	34030	57285	57285					0.1450384447059605
RRLASRVA	8	Unmodified	_RRLASRVA_					0	0	0			REV__ENST00000374057.3_1_9:117267080-117267632:-|nuORF	REV__ENST00000374057.3_1_9:117267080-117267632:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7908935546875	2	464.793592	927.572632	-1.9025	-0.00088428	-4.2508	-0.0019758	-6.1534	-0.00286	464.7914872059108	34.459	1.5924	34.459	34.009	35.601	0					104	42	3	0	0	0	0.85277	1	1862	1862		25.45	0	1	277220	+		50718	25781	34018	34031	57286	57286					0.1059482421399025
RRLASTLVHSV	11	Unmodified	_RRLASTLVHSV_					0	0	0		ENST00000505813.1_1_5:110284728-110284920:-|nuORF	ENST00000505813.1_1_5:110284728-110284920:-|nuORF	ENST00000505813.1_1_5:110284728-110284920:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8692016601562	2	619.870028	1237.7255	-0.2143	-0.00013284	-0.85851	-0.00053217	-1.0728	-0.000665	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.68532	1	9429	9429		33.922	3.6039	1	1169100			50719	12932	34019	34032	57287	57287					0.11614974819940471
RRLDARRALL	10	Unmodified	_RRLDARRALL_					0	0	0			REV__nc|ENSG00000107187|Q9UBR4-2|LHX3	REV__nc|ENSG00000107187|Q9UBR4-2|LHX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9326477050781	3	413.930067	1238.76837	1.6433	0.00068023	4.3274	0.0017912	5.9707	0.0024715	413.9318142026393	43.114	2.2589	43.114	42.157	44.416	0.00016785					149	54	3	0	0	0	0.86549	1	3293	3293		29.551	1.9068	1	500010	+		50720	29765	34020	34033	57288	57288					0.1585378966801727
RRLDVPLVLA	10	Unmodified	_RRLDVPLVLA_					0	0	0			REV__ENST00000301765.9_1_11:60899050-60899611:-|nuORF	REV__ENST00000301765.9_1_11:60899050-60899611:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3704833984375	2	576.36659	1150.71863	0.37302	0.000215	3.9242	0.0022618	4.2972	0.0024768	576.3686531735401	44.828	1.4469	44.877	44.259	45.706	0.048996					74	35	3	0	0	0	0.8651	1	3174	3174		25.574	2.5316	1	270470	+		50721	24771	34021	34034	57289	57289					0.14929661939368088
RRLEEKRRLQ	10	Unmodified	_RRLEEKRRLQ_					0	0	0		chr10:121515319-121517370|38|20.89|0.68|4.93|-|0|FGFR2,None|1	chr10:121515319-121517370|38|20.89|0.68|4.93|-|0|FGFR2,None|1	chr10:121515319-121517370|38|20.89|0.68|4.93|-|0|FGFR2,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.9483337402344	3	461.947898	1382.82186	-1.7389	-0.00080328	2.6397	0.0012194	0.90081	0.00041613	461.9491276210282	107.85	0.72025	107.89	107.25	107.97	0.036125					70	17	5	0	0	0	0.85633	1	11504	11504		21.686	0	1	82858000			50722	64	34022	34035	57290	57290					0.14576542379904822
RRLEIIDS	8	Unmodified	_RRLEIIDS_					0	0	0			REV__CON__Q497I4	REV__CON__Q497I4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2908020019531	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.80706	1	8590	8590		19.36	19.36	1	9565500	+	+	50723	16018	34023	34036	57291	57291					0.06628261191815454
RRLEIIDS	8	Unmodified	_RRLEIIDS_					0	0	0			REV__CON__Q497I4	REV__CON__Q497I4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2901916503906	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.89962	1	8885	8885		38.806	8.4884	1	9566900	+	+	50724	16018	34023	34036	57292	57292					0.06628261191815454
RRLELLQGHL	10	Unmodified	_RRLELLQGHL_					0	0	0		ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.1755065917969	3	412.250806	1233.73059	0.30796	0.00012696	1.5148	0.00062446	1.8227	0.00075142	412.25115648408996	95.18	0.47029	95.599	95.313	95.784	0.41963					26	11	3	0	0	0	0.37624	1	11400	11400		46.457	6.5836	1	455820			50725	4244	34024	34037	57293	57293					0.12307278682578726
RRLFFISL	8	Unmodified	_RRLFFISL_					0	0	0			REV__ENSG00000102886|ENST00000406256|GDPD3	REV__ENSG00000102886|ENST00000406256|GDPD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3251953125	2	526.324194	1050.63383	0.64652	0.00034028	0.32746	0.00017235	0.97398	0.00051263	526.3242858277754	80.861	1.4391	81.004	80.191	81.63	0.14352					66	40	2	0	0	0	0.89962	1	7808	7808		38.806	8.3025	1	60247	+		50726	17367	34025	34038	57294	57294					0.110543361934333
RRLFFISL	8	Unmodified	_RRLFFISL_					0	0	0			REV__ENSG00000102886|ENST00000406256|GDPD3	REV__ENSG00000102886|ENST00000406256|GDPD3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	526.324194	1050.63383	-0.14519	-7.6419E-05	1.6449	0.00086578	1.4998	0.00078936	526.325028850148	80.734	1.0088	80.871	80.389	81.397	0.13702	-0.066464	0.00079451	NaN	38.806	29	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40203	+		50727	17367	34025	34038							0.110543361934333
RRLFFTYRKH	10	Unmodified	_RRLFFTYRKH_					0	0	0		ENSG00000183476|ENST00000328828|SH2D7	ENSG00000183476|ENST00000328828|SH2D7	ENSG00000183476|ENST00000328828|SH2D7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	475.27557373046875	3	475.273834	1422.79967	-0.66012	-0.00031374	1.8899	0.00089823	1.2298	0.00058449	475.27507367632586	51.473	1.3613	51.45	50.834	52.195	-0.02343					71	35	4	0	0	0	0.86551	1	4511	4511		14.694	0.60766	1	171660			50728	7534	34026	34039	57295	57295					0.10518362702100603
RRLFLRPDPLA	11	Unmodified	_RRLFLRPDPLA_					0	0	0			REV__ENST00000421890.5_1_7:5862807-5863047:+|nuORF	REV__ENST00000421890.5_1_7:5862807-5863047:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9424133300781	3	451.941973	1352.80409	-0.47573	-0.000215	3.4608	0.0015641	2.9851	0.0013491	451.9434025086026	55.358	2.0218	55.331	54.102	56.123	-0.027275					115	58	3	0	0	0	0.74405	1	5013	5013		23.378	0	1	431630	+		50729	26503	34027	34040	57296	57296					0.14179827125030897
RRLFSTKGVAS	11	Unmodified	_RRLFSTKGVAS_					0	0	0			REV__ENSG00000130038|ENST00000440314|CRACR2A	REV__ENSG00000130038|ENST00000440314|CRACR2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3552856445312	2	611.356754	1220.69895	-0.40504	-0.00024762	-0.069959	-4.277E-05	-0.475	-0.00029039	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.70737	1	10125	10125		30.318	2.2362	1	12417000	+		50730	18843	34028	34041	57297	57297					0.09743285928607293
RRLFSTKGVAS	11	Unmodified	_RRLFSTKGVAS_					0	0	0			REV__ENSG00000130038|ENST00000440314|CRACR2A	REV__ENSG00000130038|ENST00000440314|CRACR2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3558349609375	2	611.356754	1220.69895	0.8676	0.00053041	-1.2868	-0.00078671	-0.41922	-0.00025629	611.3560720152175	95.924	5.0581	96.087	95.071	100.13	0.16317					363	118	6	0	0	0	0.70737	1	9871	9871		30.318	2.2362	1	16539000	+		50731	18843	34028	34041	57298	57298					0.09743285928607293
RRLFSTKGVAS	11	Unmodified	_RRLFSTKGVAS_					0	0	0			REV__ENSG00000130038|ENST00000440314|CRACR2A	REV__ENSG00000130038|ENST00000440314|CRACR2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3565673828125	2	611.356754	1220.69895	-1.2523	-0.00076562	0.84173	0.0005146	-0.41059	-0.00025102	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.7144	1	9824	9824		29.17	1.0886	1	16503000	+		50732	18843	34028	34041	57299	57299					0.09743285928607293
RRLGSHLTH	9	Unmodified	_RRLGSHLTH_					0	0	0			REV__ENSG00000179044|ENST00000314586|EXOC3L1	REV__ENSG00000179044|ENST00000314586|EXOC3L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.8064575195312	2	538.807231	1075.59991	-1.4886	-0.00080208	0.51859	0.00027942	-0.97003	-0.00052266	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.78983	1	8994	8994		27.882	1.8189	1	783690	+		50733	22310	34029	34042	57300	57300					0.06513307754357811
RRLGVQVTP	9	Unmodified	_RRLGVQVTP_					0	0	0		ENST00000296440.10_1_3:48466025-48471452:-|nuORF	ENST00000296440.10_1_3:48466025-48471452:-|nuORF	ENST00000296440.10_1_3:48466025-48471452:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3163452148438	2	513.314358	1024.61416	0.017852	9.1639E-06	4.224	0.0021683	4.2419	0.0021774	513.3163616040292	43.268	1.3862	43.218	42.749	44.135	-0.050312					74	33	3	0	0	0	0.7932	1	2962	2962		24.203	3.2558	1	383900			50734	9733	34030	34043	57301	57301					0.10283960182664487
RRLHELRERRA	11	Unmodified	_RRLHELRERRA_					0	0	0		ENST00000517870.1_1_1:53099041-53108627:+|nuORF	ENST00000517870.1_1_1:53099041-53108627:+|nuORF	ENST00000517870.1_1_1:53099041-53108627:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.94097900390625	3	497.96243	1490.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.4	1	29.512	29.012	30.012	0.11225								0	0	0	0.56276	1	1257	1257		8.7993	2.4784	1				50735	13107	34031	34044	57302	57302					0.1396615187700263
RRLHLGPFLSK	11	Unmodified	_RRLHLGPFLSK_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2740173339844	3	441.938451	1322.79352	-0.13164	-5.8177E-05	3.2701	0.0014452	3.1385	0.001387	441.93974761618824	56.948	1.0225	56.935	56.674	57.696	-0.012203					78	36	3	0	0	0	0.73277	1	5109	5109		25.892	9.9711	1	317980	+		50736	24025	34032	34045	57303	57303					0.1450384447059605
RRLHLGPFLSK	11	Unmodified	_RRLHLGPFLSK_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9391784667969	3	441.938451	1322.79352	0.33265	0.00014701	2.713	0.001199	3.0457	0.001346	441.9395069624772	55.282	1.2267	55.373	54.736	55.962	0.091167					101	37	4	0	0	0	0.75121	1	4576	4576		21.78	0.74819	1	451030	+		50737	24025	34032	34045	57304	57304					0.1450384447059605
RRLHLGPFLSK	11	Unmodified	_RRLHLGPFLSK_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9397888183594	3	441.938451	1322.79352	-0.63554	-0.00028087	3.7441	0.0016547	3.1086	0.0013738	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.77205	1	4618	4618		17.167	4.2093	1	409610	+		50738	24025	34032	34045	57305	57305					0.1450384447059605
RRLHPRGRL	9	Unmodified	_RRLHPRGRL_					0	0	0		ENST00000252675.6_1_19:5866654-5867368:-|nuORF	ENST00000252675.6_1_19:5866654-5867368:-|nuORF	ENST00000252675.6_1_19:5866654-5867368:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8661499023438	2	580.865415	1159.71628	-0.68716	-0.00039915	2.0003	0.0011619	1.3131	0.00076276	580.8664418786329	78.579	1.3049	79.142	78.537	79.842	0.56332					71	30	3	0	0	0	0.7932	1	9017	9017		24.203	1.1603	1	1961100			50739	9310	34033	34046	57306	57306					0.14280671044912197
RRLIARIYS	9	Unmodified	_RRLIARIYS_					0	0	0			REV__ENSG00000113312|ENST00000231238|TTC1	REV__ENSG00000113312|ENST00000231238|TTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3569946289062	2	574.356557	1146.69856	-1.0357	-0.00059487	-0.061954	-3.5583E-05	-1.0977	-0.00063045	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.78983	1	10622	10622		27.882	1.1893	1	715310	+		50740	17989	34034	34047	57307	57307					0.13107910999428896
RRLIARIYS	9	Unmodified	_RRLIARIYS_					0	0	0			REV__ENSG00000113312|ENST00000231238|TTC1	REV__ENSG00000113312|ENST00000231238|TTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3568115234375	2	574.356557	1146.69856	0.5994	0.00034427	-1.7354	-0.00099676	-1.136	-0.00065249	574.3554932610225	99.489	2.9336	99.712	98.122	101.06	0.22262					130	68	2	0	0	0	0.7932	1	10451	10451		21.96	1.013	1	294880	+		50741	17989	34034	34047	57308	57308					0.13107910999428896
RRLILWLNR	9	Unmodified	_RRLILWLNR_					0	0	0		ENST00000369577.7_1_6:87965202-87965253:+|nuORF	ENST00000369577.7_1_6:87965202-87965253:+|nuORF	ENST00000369577.7_1_6:87965202-87965253:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.9328918457031	3	413.931408	1238.77239	-0.30793	-0.00012746	3.531	0.0014616	3.223	0.0013341	413.9329171146817	43.07	1.6523	43.019	41.913	43.565	-0.050308					85	44	2	0	0	0	0.7932	1	2933	2933		18.262	0.42894	1	357350			50742	10621	34035	34048	57309	57309					0.1625587916173572
RRLIRKTK	8	Unmodified	_RRLIRKTK_					0	0	0			REV__nc|ENSG00000163714|O15042-3|U2SURP	REV__nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.8676147460938	2	535.867092	1069.71963	0.51303	0.00027492	-0.83455	-0.00044721	-0.32152	-0.00017229	535.8665104051548	17.139	0.45142	16.657	16.493	16.944	-0.48256					21	9	3	0	0	0	0.81897	1	221	221		20.947	1.587	1	299080	+		50743	29986	34036	34049	57310	57310					0.18755921098909312
RRLISFVVNL	10	Unmodified	_RRLISFVVNL_					0	0	0			REV__ENST00000366647.8_1_1:231386833-231396301:+|nuORF	REV__ENST00000366647.8_1_1:231386833-231396301:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2575988769531	3	406.255669	1215.74518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.932	1	65.057	64.557	65.557	0.12545								0	0	0	0.45132	1	5741	5741		17.167	7.0628	1		+		50744	25529	34037	34050	57311	57311					0.14593350830705276
RRLISFVVNL	10	Unmodified	_RRLISFVVNL_					0	0	0			REV__ENST00000366647.8_1_1:231386833-231396301:+|nuORF	REV__ENST00000366647.8_1_1:231386833-231396301:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25726318359375	3	406.255669	1215.74518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.163	1	54.114	53.614	54.614	-0.049271								0	0	0	0.45132	1	4470	4470		9.6461	1.6118	1		+		50745	25529	34037	34050	57312	57312					0.14593350830705276
RRLIVQGLAPD	11	Unmodified	_RRLIVQGLAPD_					0	0	0		ENST00000424094.6_1_20:57394171-57417508:-|nuORF	ENST00000424094.6_1_20:57394171-57417508:-|nuORF	ENST00000424094.6_1_20:57394171-57417508:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.3707885742188	2	619.372404	1236.73025	0.91931	0.0005694	-1.0988	-0.00068059	-0.17952	-0.00011119	619.3720836676316	101.53	1.7011	101.67	101.29	102.99	0.14102					92	41	4	0	0	0	0.69995	1	10637	10637		31.53	3.6476	1	2053400			50746	11509	34038	34051	57313	57313					0.121358589627107
RRLLEVLK	8	Unmodified	_RRLLEVLK_					0	0	0			REV__ENST00000587552.5_1_19:5708410-5719801:-|nuORF	REV__ENST00000587552.5_1_19:5708410-5719801:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.3433227539062	2	513.842751	1025.67095	-0.043039	-2.2115E-05	0.34285	0.00017617	0.29981	0.00015405	513.8427281190492	21.509	0.50888	21.444	21.265	21.774	-0.064743					30	16	3	0	0	0	0.80308	1	637	637		16.473	0	1	68803	+		50747	23118	34039	34052	57314	57314					0.15914007739161207
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3090515136719	3	478.977129	1433.90956	-1.6535	-0.00079198	-3.9029	-0.0018694	-5.5563	-0.0026614	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.76579	4	3433	3423;3433;3454;3516		18.531	6.5987	1	252010	+		50748	16807;18744	34040	34053	57315;57316;57317;57318	57316					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3090515136719	3	478.977129	1433.90956	-1.6306	-0.00078103	-3.5128	-0.0016826	-5.1434	-0.0024636	478.97540943407233	47.987	1.2617	47.987	47.56	48.821	0					77	38	3	0	0	0	0.76579	4	3703	3703;3713;3747;3790		18.531	6.796	1	195490	+		50749	16807;18744	34040	34053	57319;57320;57321;57322	57319					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3067321777344	3	478.977129	1433.90956	-1.6051	-0.0007688	-3.8477	-0.001843	-5.4528	-0.0026118	478.9751768575692	49.706	2.3794	49.706	48.538	50.918	0					127	57	3	0	0	0	0.78683	3	3845	3845;3932;4061		14.086	7.8092	1	134370	+		50750	16807;18744	34040	34053	57323;57324;57325	57323					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3094482421875	3	478.977129	1433.90956	-1.5807	-0.00075714	-3.7922	-0.0018164	-5.373	-0.0025735	478.9752399041666	51.639	1.4994	51.639	50.814	52.314	0					68	39	2	0	0	0	0.76579	4	4242	4143;4174;4231;4242		18.531	5.0231	1	107410	+		50751	16807;18744	34040	34053	57326;57327;57328;57329	57329					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.30828857421875	3	478.977129	1433.90956	-1.5624	-0.00074834	-3.8256	-0.0018324	-5.3879	-0.0025807	479.30961963549026	52.606	1.2577	52.606	52.057	53.314	0					69	33	3	0	0	0	0.77205	2	4326	4321;4326		17.167	5.7121	1	125180	+		50752	16807;18744	34040	34053	57330;57331	57331					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9752197265625	3	478.977129	1433.90956	-1.5477	-0.00074132	-3.8226	-0.0018309	-5.3703	-0.0025723	479.3095821584732	53.8	1.0088	53.8	53.251	54.26	0					54	29	2	0	0	0	0.8498	1	4508	4508		6.001	0.30226	1	89946	+		50753	16807;18744	34040	34053	57332	57332					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9764099121094	3	478.977129	1433.90956	-0.66296	-0.00031754	-4.4037	-0.0021093	-5.0667	-0.0024268	478.9749259001235	50.906	1.1817	50.882	50.384	51.566	-0.02343					53	34	2	0	0	0	0.76579	3	4461	4395;4449;4461		18.531	8.8849	1	143310	+		50754	16807;18744	34040	34053	57333;57334;57335	57335					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9742736816406	3	478.977129	1433.90956	-1.4024	-0.00067171	-4.2835	-0.0020517	-5.6859	-0.0027234	479.3093824668273	46.595	1.8758	46.59	45.62	47.496	-0.0041618					104	46	3	0	0	0	0.74405	7	3703	3703;3719;3730;3743;3764;3776;3810		23.378	13.732	1	224330	+		50755	16807;18744	34040	34053	57336;57337;57338;57339;57340;57341;57342	57336					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3085632324219	3	478.977129	1433.90956	-1.3068	-0.00062591	-4.0419	-0.001936	-5.3487	-0.0025619	478.9750986281663	49.151	3.7005	49.151	47.803	51.503	0.00016785					187	96	3	0	0	0	0.78683	3	4187	4045;4187;4241		14.086	4.2961	1	240410	+		50756	16807;18744	34040	34053	57343;57344;57345	57344					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9726867675781	3	478.977129	1433.90956	-1.3988	-0.00066997	-4.1053	-0.0019664	-5.5041	-0.0026363	478.9750520037149	52.203	1.7713	52.215	51.267	53.038	0.012436					94	42	3	0	0	0	0.78683	3	4607	4495;4516;4607		14.086	3.9821	1	183680	+		50757	16807;18744	34040	34053	57346;57347;57348	57348					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3097229003906	3	478.977129	1433.90956	-1.444	-0.00069165	-3.9918	-0.001912	-5.4358	-0.0026036	478.9751239612837	53.894	1.3907	53.916	52.877	54.267	0.022537					94	38	3	0	0	0	0.74405	2	4692	4692;4766		23.378	13.732	1	147820	+		50758	16807;18744	34040	34053	57349;57350	57349					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.64459228515625	3	478.977129	1433.90956	-1.5591	-0.00074677	-3.436	-0.0016458	-4.9951	-0.0023925	478.9753069820362	54.854	1.4806	54.881	54.109	55.59	0.027142					73	43	3	0	0	0	0.76892	1	4885	4885		17.833	1.3033	1	186030	+		50759	16807;18744	34040	34053	57351	57351					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9729309082031	3	478.977129	1433.90956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.568	1	67.598	67.098	68.098	0.030571								0	0	0	0.56276	1	6420	6420		10.104	0.8921	1		+		50760	16807;18744	34040	34053	57352	57352					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3061828613281	3	478.977129	1433.90956	-0.90639	-0.00043414	-4.4204	-0.0021173	-5.3268	-0.0025514	479.3093505928146	47.758	1.3305	47.777	47.26	48.59	0.018967					62	39	2	0	0	0	0.76251	1	3598	3598		19.263	3.342	1	302610	+		50761	16807;18744	34040	34053	57353	57353					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9748229980469	3	478.977129	1433.90956	-0.90277	-0.0004324	-4.4605	-0.0021365	-5.3632	-0.0025689	478.97487033218596	49.369	1.842	49.394	48.497	50.339	0.025578					115	47	3	0	0	0	0.74405	7	3723	3723;3759;3813;3843;3855;3875;3905		23.378	14.166	1	238510	+		50762	16807;18744	34040	34053	57354;57355;57356;57357;57358;57359;57360	57354					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.974365234375	3	478.977129	1433.90956	-0.90026	-0.0004312	-4.3134	-0.002066	-5.2137	-0.0024972	479.3094231457841	50.589	1.3321	50.619	49.948	51.28	0.029629					91	40	3	0	0	0	0.77205	5	4006	3921;3933;3988;3996;4006		17.167	4.2093	1	250790	+		50763	16807;18744	34040	34053	57361;57362;57363;57364;57365	57365					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3074951171875	3	478.977129	1433.90956	-0.89818	-0.00043021	-4.2455	-0.0020335	-5.1436	-0.0024637	478.9750533889841	51.817	1.8474	51.852	50.982	52.829	0.034588					134	56	3	0	0	0	0.74771	10	4088	4067;4088;4101;4113;4122;4137;4158;4168;4185;4208		22.562	8.6213	1	276750	+		50764	16807;18744	34040	34053	57366;57367;57368;57369;57370;57371;57372;57373;57374;57375	57367					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.6436767578125	3	478.977129	1433.90956	-0.89395	-0.00042818	-4.1917	-0.0020077	-5.0856	-0.0024359	478.9750464670604	54.211	0.95452	54.267	53.609	54.563	0.055614					56	30	3	0	0	0	0.80813	1	4483	4483		9.6461	0.43434	1	270440	+		50765	16807;18744	34040	34053	57376	57376					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3095397949219	3	478.977129	1433.90956	-0.88979	-0.00042619	-4.1556	-0.0019904	-5.0454	-0.0024166	478.97502977834864	56.875	1.1479	56.946	56.618	57.766	0.071835					88	55	2	0	0	0	0.76251	1	4846	4846		19.263	6.8298	1	207280	+		50766	16807;18744	34040	34053	57377	57377					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.973876953125	3	478.977129	1433.90956	-0.87607	-0.00041962	-4.234	-0.002028	-5.1101	-0.0024476	479.3093613771632	64.43	0.62711	64.556	64.259	64.886	0.12545					25	20	2	0	0	0	0.80593	1	5664	5664		10.104	0.8921	1	97022	+		50767	16807;18744	34040	34053	57378	57378					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9750061035156	3	478.977129	1433.90956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.303	1	47.322	46.822	47.822	0.018967								0	0	0	0.56276	1	3529	3529		17.167	7.9549	1		+		50768	16807;18744	34040	34053	57379	57379					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9730224609375	3	478.977129	1433.90956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.45	1	47.469	46.969	47.969	0.018967								0	0	0	0.56276	1	3550	3550		9.6461	3.6451	1		+		50769	16807;18744	34040	34053	57380	57380					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97515869140625	3	478.977129	1433.90956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.553	1	47.572	47.072	48.072	0.018967								0	0	0	0.56276	1	3565	3565		9.6461	3.6451	1		+		50770	16807;18744	34040	34053	57381	57381					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97528076171875	3	478.977129	1433.90956	-0.64689	-0.00030985	-4.1835	-0.0020038	-4.8304	-0.0023137	478.9749929627301	58.599	1.6691	58.591	58.082	59.751	-0.0074387					98	61	3	0	0	0	0.79224	1	5103	5103		12.957	2.3956	1	163840	+		50771	16807;18744	34040	34053	57382	57382					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.968505859375	3	478.977129	1433.90956	-2.606	-0.0012482	-3.9437	-0.0018889	-6.5497	-0.0031371	478.97517812047835	42.567	1.8165	43.264	42.571	44.387	0.69754					140	44	5	0	0	0	0.77205	4	3947	3782;3794;3843;3947		17.167	4.7086	1	1960100	+		50772	16807;18744	34040	34053	57383;57384;57385;57386	57386					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3075256347656	3	478.977129	1433.90956	-2.1227	-0.0010167	-4.4058	-0.0021103	-6.5285	-0.003127	478.97495212766586	44.149	1.2117	44.994	44.373	45.585	0.84438					85	29	4	0	0	0	0.74405	2	4025	4025;4042		23.378	10.42	1	1133200	+		50773	16807;18744	34040	34053	57387;57388	57387					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.3075256347656	3	478.977129	1433.90956	-2.1227	-0.0010167	-4.4058	-0.0021103	-6.5285	-0.003127	478.97495212766586	44.149	1.2117	44.994	44.373	45.585	0.84438					85	29	4	0	0	0	0.17955	1	4025	4025		23.378	3.751	1	1133200	+		50774	16807;18744	34040	34053	57389	57389					0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	478.977129	1433.90956	-1.5369	-0.00073616	-3.8655	-0.0018515	-5.4025	-0.0025877	478.9752365254184	54.599	0.263	54.599	54.355	54.618	0	-0.30397	0.0014669	NaN	17.833	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62232	+		50775	16807;18744	34040	34053							0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	478.977129	1433.90956	-0.051453	-2.4645E-05	-5.1699	-0.0024762	-5.2213	-0.0025009	478.97466196441246	54.965	0.84689	54.957	54.731	55.578	-0.0077095	0.054372	-0.00040737	NaN	17.833	35	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	208360	+		50776	16807;18744	34040	34053							0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	478.977129	1433.90956	-0.10031	-4.8045E-05	-5.2991	-0.0025381	-5.3994	-0.0025862	478.9745766093893	64.418	0.43393	64.417	64.134	64.568	-0.00078583	-0.056837	-0.0020823	NaN	10.104	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63788	+		50777	16807;18744	34040	34053							0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	478.977129	1433.90956	-0.40927	-0.00019603	-4.7599	-0.0022799	-5.1692	-0.0024759	479.3092662809919	55.104	1.2712	55.078	54.613	55.884	-0.025955	0.17549	0.00018169	NaN	17.833	48	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	203960	+		50778	16807;18744	34040	34053							0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	478.977129	1433.90956	-2.0297	-0.00097217	-3.3499	-0.0016045	-5.3796	-0.0025767	478.9754690609191	64.422	1.4995	64.449	63.453	64.953	0.027138	-0.025024	0.00071856	NaN	10.104	60	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98789	+		50779	16807;18744	34040	34053							0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	478.977129	1433.90956	-0.87607	-0.00041962	-4.234	-0.002028	-5.1101	-0.0024476	479.3093613771632	64.43	0.62711	64.556	64.259	64.886	0.12545	0.081861	-0.00055187	NaN	10.104	25	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97022	+		50780	16807;18744	34040	34053							0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	478.977129	1433.90956	-0.50487	-0.00024182	-4.7615	-0.0022807	-5.2664	-0.0025225	478.97479628008284	54.676	0.97213	54.626	54.291	55.263	-0.049274	-0.27616	0.00017938	NaN	17.833	53	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217110	+		50781	16807;18744	34040	34053							0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	478.977129	1433.90956	0.99372	0.00047597	-5.5239	-0.0026458	-4.5301	-0.0021698	479.309043885257	54.803	0.6712	55.209	55.032	55.704	0.40663	0.30686	-0.00091602	NaN	17.833	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138200	+		50782	16807;18744	34040	34053							0.20995788041295782
RRLLFPRLVKH	11	Unmodified	_RRLLFPRLVKH_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP;REV__nc|ENSG00000127616|P51532-5|SMARCA4	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	478.977129	1433.90956	-0.053918	-2.5825E-05	-5.0095	-0.0023994	-5.0634	-0.0024253	478.97467226762706	50.145	1.3447	50.99	50.115	51.46	0.84501	0.16822	-0.00025111	NaN	18.531	67	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	277490	+		50783	16807;18744	34040	34053							0.20995788041295782
RRLLGPSSA	9	Unmodified	_RRLLGPSSA_					0	0	0		ENST00000469466.1_1_22:19131937-19132153:-|nuORF	ENST00000469466.1_1_22:19131937-19132153:-|nuORF	ENST00000469466.1_1_22:19131937-19132153:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.7854309082031	2	478.785433	955.556313	-0.42495	-0.00020346	0.6385	0.0003057	0.21355	0.00010224	478.78545742505617	92.153	2.1454	92.198	91.261	93.406	0.045448					108	50	4	0	0	0	0.74721	1	9632	9632		37.159	6.6555	1	799270			50784	12199	34041	34054	57390	57390					0.07675698257230579
RRLLHGRRA	9	Unmodified	_RRLLHGRRA_					0	0	0			REV__ENST00000369617.8_1_1:113933414-114092146:+|nuORF	REV__ENST00000369617.8_1_1:113933414-114092146:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.857177734375	2	567.85759	1133.70063	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.478	1	74.564	74.064	75.064	0.085907								0	0	0	0.27974	1	6861	6861		38.806	10.924	1		+		50785	25624	34042	34055	57391	57391					0.1391238452788457
RRLLHGVGDK	10	Unmodified	_RRLLHGVGDK_					0	0	0		nc|ENSG00000042832|P01266-2|TG;ENSG00000042832|ENST00000220616|TG	nc|ENSG00000042832|P01266-2|TG	nc|ENSG00000042832|P01266-2|TG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.843994140625	2	575.843813	1149.67307	0.91801	0.00052863	-1.6012	-0.00092203	-0.68318	-0.00039341	575.8426932888133	103.68	0.90424	103.72	103.4	104.3	0.041481					53	21	4	0	0	0	0.86718	1	11271	11271		27.882	5.9224	1	514340			50786	939	34043	34056	57392	57392					0.10422436476983421
RRLLISAD	8	Unmodified	_RRLLISAD_					0	0	0		ENSG00000204618|ENST00000244360|RNF39;nc|ENSG00000204618|Q9H2S5-2|RNF39;nc|ENSG00000204618|Q9H2S5|RNF39	ENSG00000204618|ENST00000244360|RNF39	ENSG00000204618|ENST00000244360|RNF39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2899475097656	2	472.287808	942.561064	2.1484	0.0010146	-2.0454	-0.000966	0.103	4.8644E-05	472.28673091824714	113.99	1.2395	114.01	113.14	114.38	0.020027					83	56	2	0	0	0	0.87922	1	13724	13724		31.955	3.7006	1	98727			50787	8469	34044	34057	57393	57393					0.0874858239999412
RRLLKLPRTL	10	Unmodified	_RRLLKLPRTL_					0	0	0		nc|ENSG00000204872|Q9UHF3|NAT8B	nc|ENSG00000204872|Q9UHF3|NAT8B	nc|ENSG00000204872|Q9UHF3|NAT8B	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.4292602539062	2	633.430056	1264.84556	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.39	1	109.48	108.98	109.98	0.090057								0	0	0	0.45132	1	13305	13305		14.865	0.72775	1				50788	15215	34045	34058	57394	57394					0.22373007884334584
RRLLLLRRRQP	11	Unmodified	_RRLLLLRRRQP_					0	0	0		ENST00000324856.11_1_1:27022599-27022719:+|nuORF	ENST00000324856.11_1_1:27022599-27022719:+|nuORF	ENST00000324856.11_1_1:27022599-27022719:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.79541015625	3	492.995182	1475.96372	0.24801	0.00012227	-1.6351	-0.00080609	-1.3871	-0.00068382	493.32873048767317	22.841	0.63223	22.423	22.016	22.649	-0.41879					22	14	2	0	0	0	0.18191	1	952	952		3.4087	0	1	244910			50789	10065	34046	34059	57395	57395					0.24477380192865894
RRLLLVRGP	9	Unmodified	_RRLLLVRGP_					0	0	0		nc|ENSG00000070476|Q2QGD7-2|ZXDC;ENSG00000070476|ENST00000389709|ZXDC	nc|ENSG00000070476|Q2QGD7-2|ZXDC	nc|ENSG00000070476|Q2QGD7-2|ZXDC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	540.360595703125	2	540.361642	1078.70873	-1.4718	-0.00079528	-3.9469	-0.0021328	-5.4187	-0.002928	540.3593515673492	36.742	1.4181	36.742	36.293	37.711	0					69	32	3	0	0	0	0.7932	1	2140	2140		24.203	1.1603	1	257620			50790	1243	34047	34060	57396	57396					0.17252518724649235
RRLLNDTT	8	Unmodified	_RRLLNDTT_					0	0	0		nc|ENSG00000171804|Q6ZQQ6|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;ENSG00000171804|ENST00000447313|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.78033447265625	2	494.780348	987.546142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.076	1	84.224	83.724	84.724	0.14793								0	0	0	0.29755	1	8171	8171		24.203	1.1603	1				50791	6711	34048	34061	57397	57397					0.051870905319901794
RRLLNDTT	8	Unmodified	_RRLLNDTT_					0	0	0		nc|ENSG00000171804|Q6ZQQ6|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;ENSG00000171804|ENST00000447313|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7802734375	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.87064	1	8496	8496		29.15	1.2673	1	569520			50792	6711	34048	34061	57398	57398					0.051870905319901794
RRLLPAEESGR	11	Unmodified	_RRLLPAEESGR_					0	0	0		ENST00000538081.5_1_12:26148036-26173137:+|nuORF	ENST00000538081.5_1_12:26148036-26173137:+|nuORF	ENST00000538081.5_1_12:26148036-26173137:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.363037109375	2	642.362567	1282.71058	-1.1506	-0.00073908	1.3629	0.0008755	0.21236	0.00013641	642.3639567174044	110.02	1.5274	110.03	109.72	111.24	0.0060425					172	55	4	0	0	0	0.62614	1	11819	11819		41.427	1.3684	1	1394500			50793	13459	34049	34062	57399	57399					0.08053482951913793
RRLLPHALSF	10	Unmodified	_RRLLPHALSF_					0	0	0			REV__ENSG00000130307|ENST00000252597|USHBP1	REV__ENSG00000130307|ENST00000252597|USHBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.2443542480469	3	403.912013	1208.71421	-0.34293	-0.00013851	-4.1887	-0.0016918	-4.5316	-0.0018304	403.9102188126006	68.233	2.7499	68.781	67.193	69.943	0.54819					138	70	3	0	0	0	0.86338	1	7554	7554		31.634	2.0835	1	253300	+		50794	18865	34050	34063	57400	57400					0.11820197516431108
RRLLQLHSQ	9	Unmodified	_RRLLQLHSQ_					0	0	0			REV__ENST00000292852.8_1_19:39437129-39440720:-|nuORF	REV__ENST00000292852.8_1_19:39437129-39440720:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.84228515625	2	575.843813	1149.67307	0.47616	0.00027419	-2.8595	-0.0016466	-2.3834	-0.0013724	575.8420203793453	90.225	2.3894	90.676	89.242	91.632	0.45058					94	60	2	0	0	0	0.78536	1	10735	10735		29.15	2.4566	1	1893600	+		50795	24682	34051	34064	57401	57401					0.10422436476983421
RRLLRGLVP	9	Unmodified	_RRLLRGLVP_					0	0	0			REV__ENST00000399300.6_1_8:94749582-94753239:-|nuORF	REV__ENST00000399300.6_1_8:94749582-94753239:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.36279296875	2	540.361642	1078.70873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.533	1	44.582	44.082	45.082	0.048996								0	0	0	0.33676	1	3148	3148		18.324	0.95945	1		+		50796	26223	34052	34065	57402	57402					0.17252518724649235
RRLLRRPSR	9	Unmodified	_RRLLRRPSR_					0	0	0			REV__ENST00000544158.2_1_19:36259282-36259444:+|nuORF	REV__ENST00000544158.2_1_19:36259282-36259444:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.20916748046875	3	403.93029	1208.76904	-0.5781	-0.00023351	-2.1407	-0.0008647	-2.7188	-0.0010982	404.26441502018105	85.653	0.24927	86.101	85.945	86.194	0.44736					7	5	2	0	0	0	0.20789	1	10032	10032		27.047	0	1	46372	+		50797	21399	34053	34066	57403	57403					0.1730062910773995
RRLLSLEP	8	Unmodified	_RRLLSLEP_					0	0	0		chr1:2192076-2193639|13|43.15|0.8|5.75|-|1|None,FAAP20|1	chr1:2192076-2193639|13|43.15|0.8|5.75|-|1|None,FAAP20|1	chr1:2192076-2193639|13|43.15|0.8|5.75|-|1|None,FAAP20|1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.2991943359375	2	492.303458	982.592364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.009	1	59.009	58.509	59.509	0								0	0	0	0.29703	1	5126	5126		37.159	2.9866	1				50798	41	34054	34067	57404	57404					0.10037155434088163
RRLLTTYIN	9	Unmodified	_RRLLTTYIN_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3389892578125	2	575.340572	1148.66659	-0.95443	-0.00054912	1.0023	0.00057665	0.047846	2.7528E-05	575.3409602555264	38.845	0.98347	38.797	38.42	39.404	-0.047005					49	22	3	0	0	0	0.69624	1	2729	2729		40.778	1.5253	1	284350			50799	7573	34055	34068	57405	57405					0.09820498525596122
RRLLWLLGPRR	11	Unmodified	_RRLLWLLGPRR_					0	0	0		ENST00000265896.9_1_8:126010760-126010880:+|nuORF	ENST00000265896.9_1_8:126010760-126010880:+|nuORF	ENST00000265896.9_1_8:126010760-126010880:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3088684082031	3	479.308878	1434.90481	-1.2686	-0.00060804	1.8662	0.00089448	0.59761	0.00028644	479.3097502684534	47.94	0.94824	47.937	47.755	48.703	-0.002449					33	26	2	0	0	0	0.79716	1	4033	4033		11.932	2.2862	1	215950			50800	9516	34056	34069	57406	57406					0.20474903898525554
RRLMRSWRWRW	11	Unmodified	_RRLMRSWRWRW_					0	0	0		ENST00000414613.1_1_2:61164392-61164575:-|nuORF	ENST00000414613.1_1_2:61164392-61164575:-|nuORF	ENST00000414613.1_1_2:61164392-61164575:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2276306152344	4	422.984935	1687.91064	-0.15014	-6.3506E-05	1.1344	0.00047981	0.98421	0.00041631	423.2359238490407	56.133	0.38505	56.123	55.771	56.156	-0.010136					17	10	2	0	0	0	0.18421	1	5033	5033		0.3405	0	1	373130			50801	11369	34057	34070	57407	57407					0.09419679138545689
RRLMRSWRWRW	11	Unmodified	_RRLMRSWRWRW_					0	0	0		ENST00000414613.1_1_2:61164392-61164575:-|nuORF	ENST00000414613.1_1_2:61164392-61164575:-|nuORF	ENST00000414613.1_1_2:61164392-61164575:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.6458740234375	3	563.644155	1687.91064	-0.093845	-5.2895E-05	3.1831	0.0017941	3.0892	0.0017412	563.980540198044	56.091	0.50204	56.064	55.659	56.161	-0.027279					30	15	3	0	0	0	0.89215	1	5119	5119		3.2113	0.35952	1	327720			50802	11369	34057	34070	57408	57408					0.09419679138545689
RRLNPTSL	8	Unmodified	_RRLNPTSL_					0	0	0			REV__ENSG00000206384|ENST00000358511|COL6A6	REV__ENSG00000206384|ENST00000358511|COL6A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.78558349609375	2	478.785433	955.556313	1.6863	0.00080739	-2.1808	-0.0010441	-0.49447	-0.00023675	478.78443593268145	92.331	1.6378	92.266	91.688	93.326	-0.06414					85	38	3	0	0	0	0.87922	1	9806	9806		31.955	2.8053	1	793300	+		50803	23587	34058	34071	57409	57409					0.07675698257230579
RRLNYRRLHI	10	Unmodified	_RRLNYRRLHI_					0	0	0			REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7538146972656	3	466.284733	1395.83237	-0.22898	-0.00010677	1.4606	0.00068105	1.2316	0.00057428	466.2864189929292	53.31	0.24569	53.724	53.54	53.786	0.4139					6	5	2	0	0	0	0.37624	1	5372	5372		11.097	0	1	80632	+		50804	19889	34059	34072	57410	57410					0.15028569824971783
RRLPAIPEVFR	11	Unmodified	_RRLPAIPEVFR_					0	0	0		ENST00000515110.1_1_5:122758190-122758966:-|nuORF	ENST00000515110.1_1_5:122758190-122758966:-|nuORF	ENST00000515110.1_1_5:122758190-122758966:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9432373046875	3	451.941973	1352.80409	-1.6861	-0.00076203	4.482	0.0020256	2.7959	0.0012636	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.75121	1	4531	4531		21.78	3.9473	1	792670			50805	13074	34060	34073	57411	57411					0.14179827124985422
RRLPAIPEVFR	11	Unmodified	_RRLPAIPEVFR_					0	0	0		ENST00000515110.1_1_5:122758190-122758966:-|nuORF	ENST00000515110.1_1_5:122758190-122758966:-|nuORF	ENST00000515110.1_1_5:122758190-122758966:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9433288574219	3	451.941973	1352.80409	0.028854	1.304E-05	2.8756	0.0012996	2.9044	0.0013126	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.74405	2	4989	4857;4989		23.378	5.063	1	513120			50806	13074	34060	34073	57412;57413	57413					0.14179827124985422
RRLPQLRQPLR	11	Unmodified	_RRLPQLRQPLR_					0	0	0			REV__ENST00000307145.3_2_15:31664327-31664516:+|nuORF	REV__ENST00000307145.3_2_15:31664327-31664516:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.30181884765625	3	478.303904	1431.88988	-0.88095	-0.00042136	-1.4319	-0.00068487	-2.3128	-0.0011062	478.30312855267334	66.875	1.0299	67.008	66.517	67.547	0.13326					107	42	3	0	0	0	0.79945	1	5934	5934		11.455	2.2428	1	324080	+		50807	24839	34061	34074	57414	57414					0.1912141203054034
RRLPQSLS	8	Unmodified	_RRLPQSLS_					0	0	0		ENSG00000170631|ENST00000394909|ZNF16	ENSG00000170631|ENST00000394909|ZNF16	ENSG00000170631|ENST00000394909|ZNF16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.78564453125	2	478.785433	955.556313	-0.098425	-4.7125E-05	1.3612	0.00065172	1.2628	0.00060459	478.78530530827464	92.434	2.0709	92.504	91.595	93.666	0.06987					117	48	4	0	0	0	0.8347	1	9583	9583		23.042	1.0826	1	727550			50808	6606	34062	34075	57415	57415					0.07675698257230579
RRLPRQTG	8	Unmodified	_RRLPRQTG_					0	0	0			REV__ENST00000555704.5_1_14:50159830-50218487:+|nuORF	REV__ENST00000555704.5_1_14:50159830-50218487:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.29736328125	2	492.296499	982.578445	-0.71565	-0.00035231	0.38109	0.00018761	-0.33456	-0.0001647	492.29645794126446	62.013	0.36044	62.028	61.794	62.154	0.015724					16	11	2	0	0	0	0.87064	1	5408	5408		29.15	0	1	112670	+		50809	28687	34063	34076	57416	57416					0.08645922725656874
RRLQLNLLQS	10	Unmodified	_RRLQLNLLQS_					0	0	0			REV__ENSG00000137642|ENST00000260197|SORL1	REV__ENSG00000137642|ENST00000260197|SORL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2707214355469	3	414.254328	1239.74115	-0.74116	-0.00030703	3.8036	0.0015757	3.0624	0.0012686	414.25565491230964	52.095	0.80336	52.071	51.697	52.5	-0.023716					36	18	3	0	0	0	0.37624	1	4547	4547		10.104	2.7042	1	107240	+		50810	19397	34064	34077	57417	57417					0.13087261336977463
RRLQLSPW	8	Unmodified	_RRLQLSPW_					0	0	0		nc|ENSG00000135525|Q14244-5|MAP7;nc|ENSG00000135525|Q14244-3|MAP7;nc|ENSG00000135525|Q14244-2|MAP7;nc|ENSG00000135525|Q14244-6|MAP7;nc|ENSG00000135525|Q14244-4|MAP7;ENSG00000135525|ENST00000354570|MAP7;nc|ENSG00000135525|Q14244-7|MAP7	nc|ENSG00000135525|Q14244-5|MAP7	nc|ENSG00000135525|Q14244-5|MAP7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.2048950195312	2	528.309075	1054.6036	0.17239	9.1074E-05	-0.26533	-0.00014017	-0.092939	-4.91E-05	528.8093923530807	27.801	0.07922	27.913	27.862	27.941	0.11117					5	3	2	0	0	0	0.4196	1	1117	1117		24.203	4.206	1	26866			50811	4031	34065	34078	57418	57418					0.07847977528217598
RRLQRKSRKPR	11	Unmodified	_RRLQRKSRKPR_					0	0	0			REV__nc|ENSG00000008277|Q9P0K1-4|ADAM22	REV__nc|ENSG00000008277|Q9P0K1-4|ADAM22	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.6534729003906	3	494.318436	1479.93348	0.075762	3.745E-05	-0.78562	-0.00038835	-0.70986	-0.0003509	494.3176409824373	16.117	0.1937	16.177	16.127	16.321	0.059269					10	8	2	0	0	0	0.18159	1	122	122		17.167	3.6588	1	37878	+		50812	16131	34066	34079	57419	57419					0.2127102152765019
RRLQTLSD	8	Unmodified	_RRLQTLSD_					0	0	0			REV__ENSG00000137269|ENST00000370888|LRRC1	REV__ENSG00000137269|ENST00000370888|LRRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7831726074219	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.89494	1	8334	8334		37.159	0	1	569520	+		50813	19374	34067	34080	57420	57420					0.051870905319901794
RRLRGEQVKRR	11	Unmodified	_RRLRGEQVKRR_					0	0	0			REV__ENSG00000175756|ENST00000338338|AURKAIP1	REV__ENSG00000175756|ENST00000338338|AURKAIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.3000793457031	3	485.302675	1452.8862	-1.0424	-0.00050586	-1.4717	-0.00071423	-2.5141	-0.0012201	485.3011113307685	16.711	0.54544	16.629	16.421	16.966	-0.0821					43	23	3	0	0	0	0.81407	1	158	158		8.4073	0	1	173530	+		50814	22081	34068	34081	57421	57421					0.17786742256657817
RRLRHDPL	8	Unmodified	_RRLRHDPL_					0	0	0			REV__ENST00000609471.1_1_9:139694564-139695182:+|nuORF	REV__ENST00000609471.1_1_9:139694564-139695182:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.817599	1061.62064	-0.033207	-1.766E-05	-0.82835	-0.00044053	-0.86155	-0.00045819	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.884	1	8844	8844		33.516	1.5607	1	1254600	+		50815	29416	34069	34082	57422	57422					0.09229898134026371
RRLRHDPL	8	Unmodified	_RRLRHDPL_					0	0	0			REV__ENST00000609471.1_1_9:139694564-139695182:+|nuORF	REV__ENST00000609471.1_1_9:139694564-139695182:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8170166015625	2	531.817599	1061.62064	1.0296	0.00054754	-2.3934	-0.0012729	-1.3639	-0.00072533	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.87479	1	8887	8887		30.504	1.3541	1	1241100	+		50816	29416	34069	34082	57423	57423					0.09229898134026371
RRLRLEPLV	9	Unmodified	_RRLRLEPLV_					0	0	0		nc|ENSG00000167615|Q96PV6-1|LENG8;ENSG00000167615|ENST00000326764|LENG8	nc|ENSG00000167615|Q96PV6-1|LENG8	nc|ENSG00000167615|Q96PV6-1|LENG8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.2968139648438	2	576.372207	1150.72986	-1.4342	-0.00082662	-3.7743	-0.0021754	-5.2085	-0.003002	576.3700118308576	62.388	1.5689	62.777	62.093	63.662	0.38842					45	35	2	0	0	0	0.20789	1	6586	6586		21.96	1.013	1	88127			50817	6308	34070	34083	57424	57424					0.1605248403348014
RRLRLEPLV	9	Unmodified	_RRLRLEPLV_					0	0	0		nc|ENSG00000167615|Q96PV6-1|LENG8;ENSG00000167615|ENST00000326764|LENG8	nc|ENSG00000167615|Q96PV6-1|LENG8	nc|ENSG00000167615|Q96PV6-1|LENG8	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	576.372207	1150.72986	-0.98814	-0.00056953	-3.5435	-0.0020424	-4.5316	-0.0026119	576.8726252654914	62.45	0.088634	62.441	62.413	62.502	-0.0094147	-0.16786	0.00024367	NaN	21.96	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53744			50818	6308	34070	34083							0.1605248403348014
RRLRLSRPR	9	Unmodified	_RRLRLSRPR_					0	0	0			REV__ENST00000586267.1_1_17:42883048-42906984:-|nuORF	REV__ENST00000586267.1_1_17:42883048-42906984:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9295959472656	3	403.93029	1208.76904	0.25098	0.00010138	-1.9293	-0.00077929	-1.6783	-0.00067791	403.92942319004646	47.073	4.6899	47.112	45.811	50.501	0.038181					268	130	4	0	0	0	0.7932	1	3389	3389		12.812	0	1	2178500	+		50819	27260	34071	34084	57425	57425					0.1730062910773995
RRLRPLPPKQR	11	Unmodified	_RRLRPLPPKQR_					0	0	0		nc|ENSG00000204991|Q8WWL2-4|SPIRE2;nc|ENSG00000204991|Q8WWL2-3|SPIRE2;nc|ENSG00000204991|Q8WWL2-2|SPIRE2;ENST00000569108.5_1_16:89916567-89936677:+|nuORF;ENSG00000204991|ENST00000378247|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.9706115722656	3	472.972266	1415.89497	-1.6394	-0.00077538	-1.0525	-0.00049779	-2.6919	-0.0012732	472.9717127008119	49.434	3.3366	49.434	48.538	51.875	0					243	82	4	0	0	0	0.81407	1	3843	3843		8.4073	2.0864	1	1017000			50820	8506	34072	34085	57426	57426					0.20365715893126435
RRLRRLLLAP	10	Unmodified	_RRLRRLLLAP_					0	0	0			REV__ENSG00000130829|ENST00000342782|DUSP9	REV__ENSG00000130829|ENST00000342782|DUSP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	632.4253540039062	2	632.427848	1262.84114	-0.16111	-0.00010189	3.5728	0.0022595	3.4117	0.0021577	632.4298123182796	108.36	0.78529	108.31	108.01	108.8	-0.042404					66	29	3	0	0	0	0.87636	1	11819	11819		12.959	6.6465	1	4385300	+		50821	18915	34073	34086	57427	57427					0.22023543461477857
RRLRRRLGRLA	11	Unmodified	_RRLRRRLGRLA_					0	0	0			REV__ENST00000483107.5_1_22:21329983-21333988:+|nuORF	REV__ENST00000483107.5_1_22:21329983-21333988:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	474.9822998046875	3	474.983277	1421.928	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.174	1	39.262	38.762	39.762	0.088375								0	0	0	0.56276	1	2381	2381		10.104	0.8921	1		+		50822	27480	34074	34087	57428	57428					0.23391342735862963
RRLRRRRRRVS	11	Unmodified	_RRLRRRRRRVS_					0	0	0		ENST00000532004.5_1_11:810000-812833:+|nuORF	ENST00000532004.5_1_11:810000-812833:+|nuORF	ENST00000532004.5_1_11:810000-812833:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.004638671875	3	523.008596	1566.00396	0.10376	5.4269E-05	-2.4115	-0.0012613	-2.3078	-0.001207	523.007602847712	17.834	0.73543	17.897	17.471	18.207	0.062603					63	39	2	0	0	0	0.1842	1	255	255		0.37141	0	1	219940			50823	13369	34075	34088	57429	57429					0.2435973963597462
RRLRRWGLLPR	11	Unmodified	_RRLRRWGLLPR_					0	0	0		ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.9848327636719	3	493.647894	1477.92185	0.28936	0.00014284	3.2941	0.0016261	3.5835	0.001769	493.6493656295497	44.418	1.6555	44.467	43.631	45.286	0.048996					106	39	4	0	0	0	0.80813	1	3164	3164		9.6461	3.3253	1	509790			50824	8154	34076	34089	57430	57430					0.2020082450433165
RRLRRWKLWQW	11	Unmodified	_RRLRRWKLWQW_					0	0	0			REV__ENST00000551099.5_1_12:113659271-113664634:+|nuORF	REV__ENST00000551099.5_1_12:113659271-113664634:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7554016113281	4	421.750931	1682.97462	1.066	0.00044957	3.4534	0.0014565	4.5194	0.001906	421.7524367807664	19.866	1.2075	19.397	19.019	20.227	-0.46967					56	25	4	0	0	0	0.1838	1	670	670		1.3219	0.089996	1	237350	+		50825	28606	34077	34090	57431	57431					0.1604478256715538
RRLRRWKLWQW	11	Unmodified	_RRLRRWKLWQW_					0	0	0			REV__ENST00000551099.5_1_12:113659271-113664634:+|nuORF	REV__ENST00000551099.5_1_12:113659271-113664634:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.3377075195312	3	561.998815	1682.97462	0.37699	0.00021187	2.9926	0.0016819	3.3696	0.0018937	562.3349064448382	19.976	0.64424	19.346	19.028	19.673	-0.62961					29	13	3	0	0	0	0.88916	1	592	592		3.4087	1.99	1	155070	+		50826	28606	34077	34090	57432	57432					0.1604478256715538
RRLRRWKLWQW	11	Unmodified	_RRLRRWKLWQW_					0	0	0			REV__ENST00000551099.5_1_12:113659271-113664634:+|nuORF	REV__ENST00000551099.5_1_12:113659271-113664634:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	561.998815	1682.97462	1.1536	0.00064829	2.1087	0.0011851	3.2623	0.0018334	562.0000335120397	19.842	0.65623	19.372	19.065	19.722	-0.46967	0.013183	-0.00053696	NaN	3.4087	33	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100710	+		50827	28606	34077	34090							0.1604478256715538
RRLRRWKLWQW	11	Unmodified	_RRLRRWKLWQW_					0	0	0			REV__ENST00000551099.5_1_12:113659271-113664634:+|nuORF	REV__ENST00000551099.5_1_12:113659271-113664634:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	561.998815	1682.97462	0.37699	0.00021187	2.9926	0.0016819	3.3696	0.0018937	562.3349064448382	19.976	0.64424	19.346	19.028	19.673	-0.62961	-0.013183	0.00095329	NaN	3.4087	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	155070	+		50828	28606	34077	34090							0.1604478256715538
RRLRRWKLWQW	11	Unmodified	_RRLRRWKLWQW_					0	0	0			REV__ENST00000551099.5_1_12:113659271-113664634:+|nuORF	REV__ENST00000551099.5_1_12:113659271-113664634:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		4	421.750931	1682.97462	0.20691	8.7266E-05	4.2933	0.0018107	4.5002	0.001898	422.0033901071904	19.99	0.82623	19.361	18.983	19.809	-0.62961	-0.018113	0.00059164	NaN	1.3219	48	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299860	+		50829	28606	34077	34090							0.1604478256715538
RRLRSPRD	8	Unmodified	_RRLRSPRD_					0	0	0		ENSG00000255378|ENST00000528972|PRR23D2;ENSG00000255251|ENST00000533250|PRR23D1	ENSG00000255378|ENST00000528972|PRR23D2	ENSG00000255378|ENST00000528972|PRR23D2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.3134155273438	2	528.312681	1054.61081	-0.035772	-1.8899E-05	2.892	0.0015279	2.8563	0.001509	528.3142278244472	98.548	1.1039	98.598	98.087	99.191	0.04982					64	24	4	0	0	0	0.93786	1	10452	10452		53.351	17.733	1	426950			50830	8883	34078	34091	57433	57433					0.08568710128656676
RRLRVWRRRRH	11	Unmodified	_RRLRVWRRRRH_					0	0	0			REV__nc|ENSG00000135636|O75923-3|DYSF	REV__nc|ENSG00000135636|O75923-3|DYSF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.2084655761719	4	412.509538	1646.00904	-0.12747	-5.2583E-05	4.331	0.0017866	4.2035	0.001734	412.5112406732661	59.199	1.0586	59.591	59.276	60.335	0.39202					38	25	3	0	0	0	0.18404	1	6321	6321		3.6191	3.6191	1	207460	+		50831	29867	34079	34092	57434	57434					0.2118804349859147
RRLRVWRRRRH	11	Unmodified	_RRLRVWRRRRH_					0	0	0			REV__nc|ENSG00000135636|O75923-3|DYSF	REV__nc|ENSG00000135636|O75923-3|DYSF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		4	412.509538	1646.00904	-0.2925	-0.00012066	4.8022	0.0019809	4.5097	0.0018603	412.51144264553983	59.082	1.1954	59.635	58.964	60.16	0.55323	0.021883	0.00046357	NaN	3.6191	41	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	363910	+		50832	29867	34079	34092							0.2118804349859147
RRLSIEGN	8	Unmodified	_RRLSIEGN_					0	0	0		nc|ENSG00000114956|Q16854-3|DGUOK;nc|ENSG00000114956|Q16854-5|DGUOK;ENSG00000114956|ENST00000264093|DGUOK;chr2:73927052-73943172|42|18.24|0.71|4.68|+|2|DGUOK,None|1;ENST00000462685.1_1_2:74154028-74159771:+|nuORF;nc|ENSG00000114956|Q16854-6|DGUOK;ENST00000493055.1_1_2:74154037-74174034:+|nuORF;nc|ENSG00000114956|Q16854-4|DGUOK;nc|ENSG00000114956|Q16854-2|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7674560546875	2	472.76724	943.519927	-0.41041	-0.00019403	0.54101	0.00025577	0.1306	6.1745E-05	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.89043	1	8613	8613		35.618	2.1027	1	590200			50833	2802	34080	34093	57435	57435					0.04590821360523023
RRLSIEGN	8	Unmodified	_RRLSIEGN_					0	0	0		nc|ENSG00000114956|Q16854-3|DGUOK;nc|ENSG00000114956|Q16854-5|DGUOK;ENSG00000114956|ENST00000264093|DGUOK;chr2:73927052-73943172|42|18.24|0.71|4.68|+|2|DGUOK,None|1;ENST00000462685.1_1_2:74154028-74159771:+|nuORF;nc|ENSG00000114956|Q16854-6|DGUOK;ENST00000493055.1_1_2:74154037-74174034:+|nuORF;nc|ENSG00000114956|Q16854-4|DGUOK;nc|ENSG00000114956|Q16854-2|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7671813964844	2	472.76724	943.519927	0.62555	0.00029574	-0.6042	-0.00028565	0.02135	1.0094E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.87922	1	8039	8039		31.955	1.4512	1	508030			50834	2802	34080	34093	57436	57436					0.04590821360523023
RRLTQDNS	8	Unmodified	_RRLTQDNS_					0	0	0			REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2600402832031	2	495.259779	988.505006	1.1508	0.00056992	-0.61704	-0.0003056	0.53371	0.00026433	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.86677	1	2666	2666		27.882	0	1	3842700	+		50835	20615	34081	34094	57437	57437					0.010293294925190821
RRLVELAS	8	Unmodified	_RRLVELAS_					0	0	0			REV__nc|ENSG00000198216|Q15878-2|CACNA1E	REV__nc|ENSG00000198216|Q15878-2|CACNA1E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2872314453125	2	472.287808	942.561064	0.76193	0.00035985	-0.26462	-0.00012498	0.49731	0.00023487	472.28771256093336	99.111	1.7073	99.267	98.769	100.48	0.15659					91	39	3	0	0	0	0.84341	1	10420	10420		24.203	0	1	525470	+		50836	23309	34082	34095	57438	57438					0.0874858239999412
RRLVSLFCL	9	Unmodified	_RRLVSLFCL_					0	0	0			REV__ENST00000486327.6_1_19:47879673-47879823:+|nuORF	REV__ENST00000486327.6_1_19:47879673-47879823:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8297119140625	2	553.828786	1105.64302	0.27729	0.00015357	1.8832	0.0010429	2.1604	0.0011965	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.78983	1	8761	8761		27.882	1.1893	1	1844500	+		50837	27547	34083	34096	57439	57439					0.09442361487435846
RRLWPWGLVL	10	Unmodified	_RRLWPWGLVL_					0	0	0		ENST00000302188.7_1_2:28113810-28113921:-|nuORF	ENST00000302188.7_1_2:28113810-28113921:-|nuORF	ENST00000302188.7_1_2:28113810-28113921:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3942260742188	2	648.3904	1294.76625	-1.1411	-0.00073988	4.1578	0.0026959	3.0167	0.001956	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.8488	1	12906	12906		17.365	1.7232	1	2297700			50838	9816	34084	34097	57440	57440					0.13065360930204406
RRLWRQRQPQ	10	Unmodified	_RRLWRQRQPQ_					0	0	0		ENST00000356840.7_1_6:16129383-16129569:+|nuORF	ENST00000356840.7_1_6:16129383-16129569:+|nuORF	ENST00000356840.7_1_6:16129383-16129569:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	475.607666015625	3	475.276237	1422.80688	-0.66011	-0.00031374	-3.1672	-0.0015053	-3.8274	-0.0018191	475.27507367632586	51.473	1.3613	51.45	50.834	52.195	-0.02343					71	35	4	0	0	0	0.85633	1	4517	4517		21.686	3.8526	1	171660			50839	10371	34085	34098	57441	57441					0.11239095302539681
RRMKPVFL	8	Unmodified	_RRMKPVFL_					0	0	0			REV__nc|ENSG00000204681|Q9UBS5-2|GABBR1	REV__nc|ENSG00000204681|Q9UBS5-2|GABBR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.8213500976562	2	523.818221	1045.62189	3.6756	0.0019253	0.84645	0.00044339	4.522	0.0023687	523.8186030353656	104.57	1.3629	104.79	103.76	105.12	0.22681					58	32	2	0	0	0	0.86288	1	12760	12760		26.796	0	1	220220	+		50840	23515	34086	34099	57442	57442					0.1009039617858889
RRMKQDVGV	9	Unmodified	_RRMKQDVGV_					0	0	0			REV__chr19:57839149-57858576|24|10.54|0.46|4.52|+|0|ZNF587B,ZNF587|1	REV__chr19:57839149-57858576|24|10.54|0.46|4.52|+|0|ZNF587B,ZNF587|1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	544.79150390625	2	544.8033	1087.59205	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.971	1	51.021	50.521	51.521	0.049896								0	0	0	0.31828	1	4034	4034		24.203	1.1603	1		+		50841	15724	34087	34100	57443	57443					0.05175412442599736
RRMKSFRKV	9	Unmodified	_RRMKSFRKV_					0	0	0		ENST00000567887.5_2_1:39852942-39853068:+|nuORF	ENST00000567887.5_2_1:39852942-39853068:+|nuORF	ENST00000567887.5_2_1:39852942-39853068:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3665771484375	2	604.363859	1206.71316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.35	1	114.32	113.82	114.82	-0.024452								0	0	0	0.35443	1	12668	12668		7.1934	0	1				50842	13953	34088	34101	57444	57444					0.11807659875898935
RRMRLLLAKLY	11	Unmodified	_RRMRLLLAKLY_					0	0	0			REV__nc|ENSG00000159086|Q9Y5B6-2|PAXBP1	REV__nc|ENSG00000159086|Q9Y5B6-2|PAXBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.30279541015625	3	478.302624	1431.88604	-0.94284	-0.00045096	1.4219	0.00068012	0.47911	0.00022916	478.63764981735454	66.982	1.088	67.034	66.688	67.776	0.052376					96	41	3	0	0	0	0.8398	1	5976	5976		6.6596	0.33873	1	269070	+		50843	20636	34089	34102	57445	57445					0.1873760621249403
RRMVHRALSSA	11	Unmodified	_RRMVHRALSSA_					0	0	0		nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2	nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2	nc|ENSG00000119787|Q8NHH9-2|ATL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3599243164062	2	642.359305	1282.70406	7.1577	0.0045978	-2.7577	-0.0017714	4.4001	0.0028264	642.357698090965	112.58	0.75734	112.61	112.29	113.05	0.032707					52	25	4	0	0	0	0.77421	1	13618	13618		16.717	2.5803	1	69953			50844	14871;14872	34090	34103	57446	57446					0.0740126651958235
RRNILISIRP	10	Unmodified	_RRNILISIRP_					0	0	0			REV__ENST00000556808.1_1_X:53112313-53114116:+|nuORF	REV__ENST00000556808.1_1_X:53112313-53114116:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.266357421875	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.448	1	64.478	63.978	64.978	0.030243								0	0	0	0.45132	1	5678	5678		24.232	6.3987	1		+		50845	22653	34091	34104	57447	57447					0.16895557953557727
RRNIRKPGL	9	Unmodified	_RRNIRKPGL_					0	0	0		ENST00000372462.1_1_1:43825280-43825420:+|nuORF	ENST00000372462.1_1_1:43825280-43825420:+|nuORF	ENST00000372462.1_1_1:43825280-43825420:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.3544311523438	2	555.354348	1108.69414	1.5834	0.00087937	-3.1167	-0.0017309	-1.5333	-0.00085153	555.3524993853406	100.59	1.0891	100.89	100.45	101.54	0.2999					67	28	3	0	0	0	0.72402	1	12224	12224		38.806	3.6054	1	1093500			50846	10701	34092	34105	57448	57448					0.14414446576506634
RRNIVPGG	8	Unmodified	_RRNIVPGG_					0	0	0			REV__ENST00000303892.9_1_6:31514477-31514555:-|nuORF	REV__ENST00000303892.9_1_6:31514477-31514555:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7598876953125	2	434.759218	867.503883	2.1234	0.00092316	-2.3923	-0.0010401	-0.26887	-0.00011689	434.758413846185	87.485	3.2565	87.538	86.101	89.357	0.053024					140	76	4	0	0	0	0.83466	1	8951	8951		23.037	1.3344	1	1543500	+		50847	24805	34093	34106	57449	57449					0.06483159914296266
RRNIVPGG	8	Unmodified	_RRNIVPGG_					0	0	0			REV__ENST00000303892.9_1_6:31514477-31514555:-|nuORF	REV__ENST00000303892.9_1_6:31514477-31514555:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7602233886719	2	434.759218	867.503883	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.693	1	87.894	87.394	88.394	0.20114								0	0	0	0.29871	1	8671	8671		23.037	1.3344	1		+		50848	24805	34093	34106	57450	57450					0.06483159914296266
RRNKCQTI	8	Unmodified	_RRNKCQTI_					0	0	0			REV__nc|ENSG00000175356|Q9NQ36-2|SCUBE2	REV__nc|ENSG00000175356|Q9NQ36-2|SCUBE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.7855224609375	2	509.782367	1017.55018	4.8147	0.0024544	0.62987	0.0003211	5.4445	0.0027755	509.78234964261355	106.07	0.84253	106.25	105.87	106.71	0.18647					84	35	4	0	0	0	0.89043	1	13019	13019		35.618	5.1146	1	596630	+		50849	22064	34094	34107	57451	57451					0.04210856754059478
RRNKLDHYAI	10	Unmodified	_RRNKLDHYAI_					0	0	0		ENST00000498163.1_1_8:23064590-23064794:+|nuORF;ENST00000438548.2_1_6:133318790-133319099:-|nuORF;ENST00000416139.1_1_1:212482446-212482779:-|nuORF;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000395315.2_1_2:54756482-54756872:+|nuORF;ENSG00000198242|ENST00000422514|RPL23A	ENST00000498163.1_1_8:23064590-23064794:+|nuORF	ENST00000498163.1_1_8:23064590-23064794:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.3636474609375	2	643.359828	1284.7051	1.5344	0.00098717	1.173	0.00075467	2.7074	0.0017418	643.3613886336739	63.343	1.1293	63.456	62.776	63.905	0.11389					77	56	2	0	0	0	0.86348	1	5555	5555		31.53	10.583	1	780720			50850	8259	34095	34108	57452	57452					0.0741380416013726
RRNKLDHYAI	10	Unmodified	_RRNKLDHYAI_					0	0	0		ENST00000498163.1_1_8:23064590-23064794:+|nuORF;ENST00000438548.2_1_6:133318790-133319099:-|nuORF;ENST00000416139.1_1_1:212482446-212482779:-|nuORF;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000395315.2_1_2:54756482-54756872:+|nuORF;ENSG00000198242|ENST00000422514|RPL23A	ENST00000498163.1_1_8:23064590-23064794:+|nuORF	ENST00000498163.1_1_8:23064590-23064794:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	643.359828	1284.7051	0.1078	6.9354E-05	3.3778	0.0021731	3.4856	0.0022425	643.3622246688675	63.385	1.0987	63.412	62.734	63.833	0.027142	-0.027409	0.00062493	NaN	31.53	61	48	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	494230			50851	8259	34095	34108							0.0741380416013726
RRNNKGIN	8	Unmodified	_RRNNKGIN_					0	0	0		ENST00000532402.5_1_11:62392300-62392474:-|nuORF	ENST00000532402.5_1_11:62392300-62392474:-|nuORF	ENST00000532402.5_1_11:62392300-62392474:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2857666015625	2	486.278306	970.54206	0.61339	0.00029828	1.4867	0.00072296	2.1001	0.0010212	486.2790508855473	51.303	0.33176	52.055	51.858	52.189	0.75174					11	7	2	0	0	0	0.4196	1	5105	5105		25.45	18.715	1	178910			50852	13376	34096	34109	57453	57453					0.055610458289379494
RRNPLLWLLQ	10	Unmodified	_RRNPLLWLLQ_					0	0	0		ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	ENSG00000175283|ENST00000372586|DOLK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.9340515136719	3	436.934818	1307.78262	0.49799	0.00021759	-2.4464	-0.0010689	-1.9484	-0.00085131	436.93369927878706	20.732	2.5953	20.273	19.595	22.19	-0.4591					152	59	4	0	0	0	0.86802	1	660	660		27.047	9.2142	1	492360			50853	7004	34097	34110	57454	57454					0.141044420963226
RRNQPVIVLN	10	Unmodified	_RRNQPVIVLN_					0	0	0		ENSG00000178163|ENST00000326756|ZNF518B	ENSG00000178163|ENST00000326756|ZNF518B	ENSG00000178163|ENST00000326756|ZNF518B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8671264648438	2	604.864746	1207.71494	3.1994	0.0019352	2.4797	0.0014999	5.6791	0.0034351	604.8663317043117	116.05	1.2157	116.03	115.77	116.99	-0.02433					49	39	2	0	0	0	0.86444	1	12918	12918		14.865	3.9993	1	83492			50854	7188	34098	34111	57455	57455					0.11938992165505624
RRNRRININ	9	Unmodified	_RRNRRININ_					0	0	0			REV__nc|ENSG00000119778|Q9ULI0-2|ATAD2B	REV__nc|ENSG00000119778|Q9ULI0-2|ATAD2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.90960693359375	3	404.577916	1210.71192	1.28	0.00051785	0.13585	5.4961E-05	1.4158	0.00057282	404.57830603827813	65.824	0.2394	66.21	66.11	66.349	0.38581					6	5	2	0	0	0	0.20789	1	7154	7154		14.137	0	1	44527	+		50855	18378	34099	34112	57456	57456					0.11499161831375204
RRNTVDLA	8	Unmodified	_RRNTVDLA_					0	0	0		nc|ENSG00000100239|O75170-2|PPP6R2;nc|ENSG00000100239|O75170-6|PPP6R2;nc|ENSG00000100239|O75170-4|PPP6R2;nc|ENSG00000100239|O75170-3|PPP6R2	nc|ENSG00000100239|O75170-2|PPP6R2	nc|ENSG00000100239|O75170-2|PPP6R2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.76788330078125	2	472.76724	943.519927	-1.4813	-0.00070033	1.1453	0.00054148	-0.33599	-0.00015885	472.76778971214105	81.58	2.2284	81.694	80.507	82.735	0.11426					112	53	4	0	0	0	0.86288	1	7887	7887		26.796	1.3459	1	160160			50856	14811	34100	34113	57457	57457					0.04590821360500286
RRNVQIFNS	9	Unmodified	_RRNVQIFNS_					0	0	0			REV__nc|ENSG00000172717|Q8N9W8-2|GARIN2	REV__nc|ENSG00000172717|Q8N9W8-2|GARIN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3302001953125	2	567.312346	1132.61014	0.48186	0.00027337	0.91777	0.00052066	1.3996	0.00079403	567.8147322675502	91.52	0.12979	91.741	91.633	91.763	0.22157					4	2	2	0	0	0	0.20789	1	9221	9221		35.618	22.164	1	28251	+		50857	21849	34101	34114	57458	57458					0.049138706889380046
RRPAAALGG	9	Unmodified	_RRPAAALGG_					0	0	0		ENST00000507035.2_1_5:134374548-134375597:-|nuORF	ENST00000507035.2_1_5:134374548-134375597:-|nuORF	ENST00000507035.2_1_5:134374548-134375597:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7596130371094	2	434.759218	867.503883	-1.1839	-0.00051471	1.8024	0.00078363	0.61853	0.00026891	434.7597390953803	87.854	3.3898	87.854	86.125	89.515	0					151	78	4	0	0	0	0.7932	1	8410	8410		26.796	1.3459	1	789230			50858	12950	34102	34115	57459	57459					0.06483159914284897
RRPAAALGG	9	Unmodified	_RRPAAALGG_					0	0	0		ENST00000507035.2_1_5:134374548-134375597:-|nuORF	ENST00000507035.2_1_5:134374548-134375597:-|nuORF	ENST00000507035.2_1_5:134374548-134375597:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7599182128906	2	434.759218	867.503883	1.0426	0.00045328	-1.4353	-0.00062401	-0.39271	-0.00017073	434.7588689622068	87.637	3.2918	87.563	86.012	89.304	-0.073997					167	77	4	0	0	0	0.76402	1	9061	9061		35.201	8.4046	1	1572200			50859	12950	34102	34115	57460	57460					0.06483159914284897
RRPAAALGG	9	Unmodified	_RRPAAALGG_					0	0	0		ENST00000507035.2_1_5:134374548-134375597:-|nuORF	ENST00000507035.2_1_5:134374548-134375597:-|nuORF	ENST00000507035.2_1_5:134374548-134375597:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.76019287109375	2	434.759218	867.503883	2.1234	0.00092316	-2.3923	-0.0010401	-0.26887	-0.00011689	434.758413846185	87.485	3.2565	87.538	86.101	89.357	0.053024					140	76	4	0	0	0	0.76996	1	8989	8989		33.516	3.0119	1	1543500			50860	12950	34102	34115	57461	57461					0.06483159914284897
RRPAAALGG	9	Unmodified	_RRPAAALGG_					0	0	0		ENST00000507035.2_1_5:134374548-134375597:-|nuORF	ENST00000507035.2_1_5:134374548-134375597:-|nuORF	ENST00000507035.2_1_5:134374548-134375597:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7598571777344	2	434.759218	867.503883	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.348	1	87.515	87.015	88.015	0.16635								0	0	0	0.31088	1	8578	8578		26.796	0	1				50861	12950	34102	34115	57462	57462					0.06483159914284897
RRPAASQQY	9	Unmodified	_RRPAASQQY_					0	0	0			REV__ENST00000414809.7_1_1:44398992-44399445:+|nuORF	REV__ENST00000414809.7_1_1:44398992-44399445:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7850952148438	2	538.783422	1075.55229	-0.62764	-0.00033816	3.7601	0.0020259	3.1325	0.0016877	538.7851860933928	68.117	1.1237	68.665	68.243	69.367	0.54819					70	26	5	0	0	0	0.17307	1	7492	7492		79.451	0	1	2087100	+		50862	26412	34103	34116	57463	57463					0.017536087635107833
RRPALRPVSA	10	Unmodified	_RRPALRPVSA_					0	0	0		ENST00000374358.4_1_1:25664706-25666969:+|nuORF	ENST00000374358.4_1_1:25664706-25666969:+|nuORF	ENST00000374358.4_1_1:25664706-25666969:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.8458251953125	2	561.846356	1121.67816	0.41142	0.00023115	-1.5307	-0.00086003	-1.1193	-0.00062887	561.8453227320805	96.693	1.8248	96.924	96.437	98.262	0.23103					107	42	4	0	0	0	0.85466	1	10009	10009		20.947	1.8434	1	1323100			50863	10776	34104	34117	57464	57464					0.12218740339608303
RRPAPPGG	8	Unmodified	_RRPAPPGG_					0	0	0			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2327880859375	2	404.232836	806.45112	-1.2204	-0.00049332	1.7807	0.00071981	0.5603	0.00022649	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.82464	1	8050	8050		21.702	2.3424	1	2752600	+		50864	23985	34105	34118	57465	57465					0.040152018514731935
RRPAPPGG	8	Unmodified	_RRPAPPGG_					0	0	0			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.2328186035156	2	404.232836	806.45112	0.76489	0.0003092	-0.41052	-0.00016594	0.35438	0.00014325	404.2325671203917	85.114	3.6255	85.042	83.452	87.078	-0.07196					165	83	2	0	0	0	0.82464	2	8716	8716;8741		21.702	0.7554	1	4970800	+		50865	23985	34105	34118	57466;57467	57466					0.040152018514731935
RRPAPPGG	8	Unmodified	_RRPAPPGG_					0	0	0			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2327880859375	2	404.232836	806.45112	2.8761	0.0011626	-2.4963	-0.0010091	0.37984	0.00015354	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.82464	1	8603	8603		21.702	0.7554	1	4761400	+		50866	23985	34105	34118	57468	57468					0.040152018514731935
RRPAPPGG	8	Unmodified	_RRPAPPGG_					0	0	0			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.2322692871094	2	404.232836	806.45112	-0.39209	-0.00015849	0.40601	0.00016412	0.013927	5.6299E-06	404.23288491550113	84.848	3.8677	85.296	83.349	87.217	0.44736					164	94	4	0	0	0	0.83466	2	9911	9911;9922		29.842	8.1392	1	3295900	+		50867	23985	34105	34118	57469;57470	57469					0.040152018514731935
RRPAQAGG	8	Unmodified	_RRPAQAGG_					0	0	0		nc|ENSG00000245848|P49715-4|CEBPA;ENST00000425420.2_19:33792364-33793425:-|nuORF	nc|ENSG00000245848|P49715-4|CEBPA	nc|ENSG00000245848|P49715-4|CEBPA	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.72906494140625	2	406.727918	811.441283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.203	1	76.25	75.75	76.75	0.046448								0	0	0	0.29353	1	7441	7441		28.254	0	1				50868	15284	34106	34119	57471	57471					0.028020138460874477
RRPAVTRAT	9	Unmodified	_RRPAVTRAT_					0	0	0		ENST00000373271.5_1_20:39794138-39794333:+|nuORF	ENST00000373271.5_1_20:39794138-39794333:+|nuORF	ENST00000373271.5_1_20:39794138-39794333:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	514.311767578125	2	514.309606	1026.60466	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.497	1	50.527	50.027	51.027	0.029629								0	0	0	0.31828	1	3970	3970		24.203	1.1603	1				50869	10737	34107	34120	57472	57472					0.0924219189712403
RRPDPVSL	8	Unmodified	_RRPDPVSL_					0	0	0			REV__ENST00000291560.6_1_21:45077957-45078116:-|nuORF	REV__ENST00000291560.6_1_21:45077957-45078116:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.27191162109375	2	470.272158	938.529764	1.675	0.00078769	-1.7547	-0.00082518	-0.079724	-3.7492E-05	470.2713101405092	92.346	2.9868	92.282	91.318	94.305	-0.06414					149	70	4	0	0	0	0.88601	1	9768	9768		34.173	0.67956	1	1961400	+		50870	24669	34108	34121	57473	57473					0.05804009365908769
RRPDPVSL	8	Unmodified	_RRPDPVSL_					0	0	0			REV__ENST00000291560.6_1_21:45077957-45078116:-|nuORF	REV__ENST00000291560.6_1_21:45077957-45078116:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.27178955078125	2	470.272158	938.529764	-0.95275	-0.00044805	0.77303	0.00036353	-0.17972	-8.4519E-05	470.2725133090264	92.093	2.8487	92.314	91.222	94.07	0.22157					155	67	4	0	0	0	0.87479	1	9283	9283		30.504	0	1	1872200	+		50871	24669	34108	34121	57474	57474					0.05804009365908769
RRPDPVSL	8	Unmodified	_RRPDPVSL_					0	0	0			REV__ENST00000291560.6_1_21:45077957-45078116:-|nuORF	REV__ENST00000291560.6_1_21:45077957-45078116:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.2721252441406	2	470.272158	938.529764	-1.7118	-0.000805	1.6827	0.00079131	-0.029114	-1.3691E-05	470.2729404281299	92.166	2.8676	92.352	91.202	94.069	0.18582					129	67	3	0	0	0	0.87922	1	9276	9276		31.955	6.3808	1	1756700	+		50872	24669	34108	34121	57475	57475					0.05804009365908769
RRPEPAGG	8	Unmodified	_RRPEPAGG_					0	0	0		nc|nan|Q6ZSJ8-2|C1orf122;ENSG00000197982|ENST00000373042|C1orf122	nc|nan|Q6ZSJ8-2|C1orf122	nc|nan|Q6ZSJ8-2|C1orf122	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2265319824219	2	420.227751	838.440949	-0.18786	-7.8944E-05	0.38594	0.00016218	0.19808	8.324E-05	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.884	1	7381	7381		33.516	4.366	1	279000			50873	8223	34109	34122	57476	57476					0.015265941262327942
RRPEPAGG	8	Unmodified	_RRPEPAGG_					0	0	0		nc|nan|Q6ZSJ8-2|C1orf122;ENSG00000197982|ENST00000373042|C1orf122	nc|nan|Q6ZSJ8-2|C1orf122	nc|nan|Q6ZSJ8-2|C1orf122	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2273254394531	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.86791	2	7289	7289;7489		37.028	1.8278	1	634680			50874	8223	34109	34122	57477;57478	57477					0.015265941262327942
RRPFNLRHL	9	Unmodified	_RRPFNLRHL_					0	0	0			REV__nc|ENSG00000133460|Q9BYW1|SLC2A11	REV__nc|ENSG00000133460|Q9BYW1|SLC2A11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.23150634765625	3	403.575624	1207.70504	-0.34084	-0.00013755	-1.2543	-0.00050621	-1.5952	-0.00064377	403.5750005668677	84.271	3.0277	84.718	84.392	87.419	0.44736					131	74	3	0	0	0	0.20789	1	9959	9959		32.812	11.127	1	818700	+		50875	19080	34110	34123	57479	57479					0.10949848950804153
RRPGAKTG	8	Unmodified	_RRPGAKTG_					0	0	0			REV__nc|ENSG00000177426|Q15583|TGIF1	REV__nc|ENSG00000177426|Q15583|TGIF1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7517395019531	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.391	1	75.345	74.845	75.845	-0.045982								0	0	0	0.29344	1	7433	7433		31.955	6.5047	1		+		50876	30056	34111	34124	57480	57480					0.061148733972345326
RRPGKAAS	8	Unmodified	_RRPGKAAS_					0	0	0		ENST00000542754.6_3_14:31494687-31494903:+|nuORF	ENST00000542754.6_3_14:31494687-31494903:+|nuORF	ENST00000542754.6_3_14:31494687-31494903:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7533264160156	2	421.751393	841.488233	-0.10002	-4.2183E-05	0.32598	0.00013748	0.22596	9.5298E-05	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.85277	1	7625	7625		25.45	1.2474	1	579450			50877	13541	34112	34125	57481	57481					0.06114873397223164
RRPGKAAS	8	Unmodified	_RRPGKAAS_					0	0	0		ENST00000542754.6_3_14:31494687-31494903:+|nuORF	ENST00000542754.6_3_14:31494687-31494903:+|nuORF	ENST00000542754.6_3_14:31494687-31494903:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7527770996094	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.7961	2	7525	7318;7525		53.351	14.545	1	532850			50878	13541	34112	34125	57482;57483	57483					0.06114873397223164
RRPGLTVAGV	10	Unmodified	_RRPGLTVAGV_					0	0	0			REV__ENST00000308893.8_1_16:29985169-29989140:+|nuORF	REV__ENST00000308893.8_1_16:29985169-29989140:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3182983398438	2	513.314358	1024.61416	0.40552	0.00020816	4.0183	0.0020626	4.4238	0.0022708	513.3165443291848	55.171	1.2841	55.262	54.835	56.119	0.091164					59	39	2	0	0	0	0.85466	1	4596	4596		20.947	3.582	1	269410	+		50879	24866	34113	34126	57484	57484					0.10283960182664487
RRPGRVPNRTG	11	Unmodified	_RRPGRVPNRTG_					0	0	0			REV__ENST00000562760.1_1_8:95651187-95651544:-|nuORF	REV__ENST00000562760.1_1_8:95651187-95651544:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3701782226562	2	633.368518	1264.72248	1.5936	0.0010093	-0.44847	-0.00028405	1.1451	0.00072528	633.3681450827713	95.612	2.2846	96.032	94.734	97.018	0.41963					200	55	4	0	0	0	0.72374	1	11340	11340		24.519	0	1	3838500	+		50880	28806	34114	34127	57485	57485					0.10071144485755212
RRPHTRCCNMR	11	Unmodified	_RRPHTRCCNMR_					0	0	0			REV__ENST00000462117.5_1_19:48972629-48975663:+|nuORF	REV__ENST00000462117.5_1_19:48972629-48975663:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	477.23046875	3	477.232658	1428.67614	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.461	1	69.461	68.961	69.961	0								0	0	0	0.56276	1	6192	6192		35.178	17.345	1		+		50881	27044	34115	34128	57486	57486					-0.021047030038062076
RRPIAAATT	9	Unmodified	_RRPIAAATT_					0	0	0			REV__ENSG00000105245|ENST00000252891|NUMBL	REV__ENSG00000105245|ENST00000252891|NUMBL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.7857360839844	2	478.785433	955.556313	-0.98121	-0.00046979	2.8532	0.0013661	1.872	0.0008963	478.7857916206205	92.576	2.3382	92.576	91.633	93.971	0					123	53	4	0	0	0	0.78058	1	9112	9112		30.504	5.0535	1	417180	+		50882	17518	34116	34129	57487	57487					0.07675698257207841
RRPIAAATT	9	Unmodified	_RRPIAAATT_					0	0	0			REV__ENSG00000105245|ENST00000252891|NUMBL	REV__ENSG00000105245|ENST00000252891|NUMBL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.7852478027344	2	478.785433	955.556313	-1.6841	-0.00080631	1.9315	0.00092477	0.24743	0.00011846	478.78607821108346	92.142	1.9841	92.328	91.657	93.642	0.18582					105	46	4	0	0	0	0.7932	1	9269	9269		24.203	1.1603	1	673480	+		50883	17518	34116	34129	57488	57488					0.07675698257207841
RRPKILLW	8	Unmodified	_RRPKILLW_					0	0	0		ENST00000292524.5_1_8:145747288-145748023:+|nuORF	ENST00000292524.5_1_8:145747288-145748023:+|nuORF	ENST00000292524.5_1_8:145747288-145748023:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.3573608398438	2	541.353286	1080.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.5	1	112.54	112.04	113.04	0.032707								0	0	0	0.30674	1	13632	13632		15.636	0	1				50884	9687	34117	34130	57489	57489					0.15490017838715175
RRPKRIII	8	Unmodified	_RRPKRIII_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.36181640625	2	526.364185	1050.71382	-1.5676	-0.00082514	-4.2159	-0.0022191	-5.7835	-0.0030442	526.3617973555264	35.031	1.6441	35.031	34.615	36.259	0					148	43	4	0	0	0	0.81548	1	1886	1886		20.482	2.1574	1	1307600			50885	8866	34118	34131	57490	57490					0.19048822587274117
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.6461181640625	3	483.647671	1447.92118	-1.6265	-0.00078667	-1.0559	-0.00051067	-2.6824	-0.0012973	483.64706776464374	46.522	1.6286	46.522	46.06	47.688	0					186	51	5	0	0	0	0.81219	1	3570	3570		8.7993	2.4784	1	4540800			50886	219	34119	34132	57491	57491					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.6463928222656	3	483.647671	1447.92118	-1.6009	-0.00077425	-0.97695	-0.0004725	-2.5778	-0.0012468	483.64708308420245	48.306	2.7356	48.306	47.6	50.336	0					237	72	5	0	0	0	0.81219	1	3732	3732		8.7993	2.1397	1	1611600			50887	219	34119	34132	57492	57492					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.6461181640625	3	483.647671	1447.92118	-0.78233	-0.00037837	-1.9561	-0.00094607	-2.7385	-0.0013244	483.64658979005526	46.598	1.6296	46.569	46.013	47.642	-0.028782					170	44	5	0	0	0	0.81407	1	3846	3846		8.4073	2.0864	1	5108400			50888	219	34119	34132	57493	57493					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.6462097167969	3	483.647671	1447.92118	-1.6199	-0.00078345	-1.0977	-0.0005309	-2.7176	-0.0013144	483.64701567342865	46.699	1.7316	46.695	46.155	47.886	-0.0041618					198	50	6	0	0	0	0.77511	1	3796	3796		16.53	6.426	1	5137200			50889	219	34119	34132	57494	57494					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.64630126953125	3	483.647671	1447.92118	-0.83799	-0.00040529	-1.7948	-0.00086806	-2.6328	-0.0012733	483.646679966578	46.367	1.8019	46.382	45.827	47.628	0.015514					182	51	6	0	0	0	0.79716	1	3395	3395		11.932	0.47776	1	4521700			50890	219	34119	34132	57495	57495					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.6466064453125	3	483.647671	1447.92118	-0.83511	-0.0004039	-1.4741	-0.00071293	-2.3092	-0.0011168	483.6468148790766	48.119	2.7855	48.141	47.459	50.244	0.02227					217	75	4	0	0	0	0.81407	1	3634	3634		8.4073	1.7476	1	1942300			50891	219	34119	34132	57496	57496					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.6463317871094	3	483.647671	1447.92118	-0.19648	-9.5025E-05	-2.4553	-0.0011875	-2.6518	-0.0012825	483.6463549494067	46.472	1.6155	46.393	45.933	47.548	-0.079002					182	48	5	0	0	0	0.81219	1	3428	3428		8.7993	0.76496	1	4742900			50892	219	34119	34132	57497	57497					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.6465759277344	3	483.647671	1447.92118	-0.25795	-0.00012476	-2.1657	-0.0010474	-2.4237	-0.0011722	483.6464782626143	48.15	2.9849	48.057	47.534	50.519	-0.093178					204	77	5	0	0	0	0.79224	2	3662	3652;3662		12.957	0.52465	1	2128000			50893	219	34119	34132	57498;57499	57499					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.646240234375	3	483.647671	1447.92118	-0.50388	-0.0002437	-2.3877	-0.0011548	-2.8916	-0.0013985	483.64638428050455	45.883	1.292	46.354	45.807	47.099	0.47139					126	31	5	0	0	0	0.79224	2	4279	4279;4334		12.957	6.6366	1	13323000			50894	219	34119	34132	57500;57501	57500					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.6457214355469	3	483.647671	1447.92118	-1.5634	-0.00075612	-2.0746	-0.0010034	-3.638	-0.0017595	483.6466147917682	44.248	1.3424	45.092	44.653	45.995	0.84438					150	32	6	0	0	0	0.79476	1	4069	4069		12.433	2.3289	1	35535000			50895	219	34119	34132	57502	57502					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;chr17:27789688-27793588|29|17.31|0.71|4.6|-|ENST00000646938|NOS2,NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.6466064453125	3	483.647671	1447.92118	-0.99627	-0.00048184	-1.8756	-0.00090712	-2.8718	-0.001389	483.64666286648185	45.633	1.4844	46.528	45.964	47.448	0.89542					143	36	5	0	0	0	0.81021	1	4279	4279		9.2118	0	1	13898000			50896	219	34119	34132	57503	57503					0.2151398506462101
RRPKTPAS	8	Unmodified	_RRPKTPAS_					0	0	0		ENSG00000135540|ENST00000343505|NHSL1;ENST00000426841.6_1_6:138768126-138820433:-|nuORF;nc|ENSG00000135540|Q5SYE7|NHSL1	ENSG00000135540|ENST00000343505|NHSL1	ENSG00000135540|ENST00000343505|NHSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7723083496094	2	456.772326	911.530098	1.381	0.0006308	-0.41389	-0.00018905	0.96711	0.00044175	456.7715202988468	90.098	2.3552	90.028	88.797	91.153	-0.069977					132	55	5	0	0	0	0.87479	1	9451	9451		30.504	0	1	1094100			50897	4033	34120	34133	57504	57504					0.07079429085740685
RRPLCRRLGAR	11	Unmodified	_RRPLCRRLGAR_					0	0	0		ENST00000580793.5_1_17:80006031-80006253:-|nuORF	ENST00000580793.5_1_17:80006031-80006253:-|nuORF	ENST00000580793.5_1_17:80006031-80006253:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9433288574219	3	451.942201	1352.80477	-0.06697	-3.0266E-05	2.3101	0.001044	2.2431	0.0010138	451.9431207678107	53.546	2.822	53.541	51.391	54.213	-0.0053711					204	73	4	0	0	0	0.71207	1	4589	4589		29.551	6.1728	1	724120			50898	14099	34121	34134	57505	57505					0.1424834329307032
RRPLCRRLGAR	11	Unmodified	_RRPLCRRLGAR_					0	0	0		ENST00000580793.5_1_17:80006031-80006253:-|nuORF	ENST00000580793.5_1_17:80006031-80006253:-|nuORF	ENST00000580793.5_1_17:80006031-80006253:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	451.942201	1352.80477	-0.82105	-0.00037107	3.0534	0.00138	2.2323	0.0010089	451.9434604025162	52.867	1.7816	53.291	52.681	54.462	0.42348	-0.17968	0.00042633	NaN	29.551	90	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	463890			50899	14099	34121	34134							0.1424834329307032
RRPLCRRLGAR	11	Unmodified	_RRPLCRRLGAR_					0	0	0		ENST00000580793.5_1_17:80006031-80006253:-|nuORF	ENST00000580793.5_1_17:80006031-80006253:-|nuORF	ENST00000580793.5_1_17:80006031-80006253:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	451.942201	1352.80477	-0.025929	-1.1718E-05	2.2184	0.0010026	2.1925	0.00099089	451.94313812102916	52.473	1.5743	53.14	52.715	54.289	0.66729	-0.3303	-0.00070571	NaN	29.551	79	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	362400			50900	14099	34121	34134							0.1424834329307032
RRPLELPRGT	10	Unmodified	_RRPLELPRGT_					0	0	0		ENST00000416792.1_3_19:55944525-55949973:-|nuORF;ENSG00000187902|ENST00000376325|SHISA7	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8560180664062	2	597.856921	1193.69929	-0.35529	-0.00021242	-0.43374	-0.00025932	-0.78904	-0.00047173	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.66675	4	9111	9099;9111;9123;9147		46.457	6.3986	1	1224100			50901	7891	34122	34135	57506;57507;57508;57509	57507					0.11018705648416471
RRPLELPRGT	10	Unmodified	_RRPLELPRGT_					0	0	0		ENST00000416792.1_3_19:55944525-55949973:-|nuORF;ENSG00000187902|ENST00000376325|SHISA7	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8565673828125	2	597.856921	1193.69929	-0.32365	-0.0001935	0.21288	0.00012727	-0.11077	-6.6223E-05	598.3588954923197	94.611	4.9065	94.611	93.622	98.528	0					293	115	3	0	0	0	0.4892	4	9464	9268;9314;9335;9464		56.721	13.857	1	5706300			50902	7891	34122	34135	57510;57511;57512;57513	57513					0.11018705648416471
RRPLELPRGT	10	Unmodified	_RRPLELPRGT_					0	0	0		ENST00000416792.1_3_19:55944525-55949973:-|nuORF;ENSG00000187902|ENST00000376325|SHISA7	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.855712890625	2	597.856921	1193.69929	-0.56225	-0.00033615	-0.53243	-0.00031831	-1.0947	-0.00065446	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.54701	1	9421	9421		52.937	22.619	1	2042000			50903	7891	34122	34135	57514	57514					0.11018705648416471
RRPLELPRGT	10	Unmodified	_RRPLELPRGT_					0	0	0		ENST00000416792.1_3_19:55944525-55949973:-|nuORF;ENSG00000187902|ENST00000376325|SHISA7	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.856201171875	2	597.856921	1193.69929	-0.56163	-0.00033577	-0.46706	-0.00027924	-1.0287	-0.00061501	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.8608	2	9820	9820;10009		34.173	3.6424	1	6282800			50904	7891	34122	34135	57515;57516	57515					0.11018705648416471
RRPLELPRGT	10	Unmodified	_RRPLELPRGT_					0	0	0		ENST00000416792.1_3_19:55944525-55949973:-|nuORF;ENSG00000187902|ENST00000376325|SHISA7	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8558959960938	2	597.856921	1193.69929	2.1625	0.0012929	-3.3793	-0.0020203	-1.2168	-0.00072745	597.8546696490685	92.423	2.9286	92.359	90.439	93.367	-0.06414					206	70	4	0	0	0	0.74274	4	9738	9619;9643;9680;9738		42.396	14.289	1	2186000			50905	7891	34122	34135	57517;57518;57519;57520	57520					0.11018705648416471
RRPLELPRGT	10	Unmodified	_RRPLELPRGT_					0	0	0		ENST00000416792.1_3_19:55944525-55949973:-|nuORF;ENSG00000187902|ENST00000376325|SHISA7	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8556518554688	2	597.856921	1193.69929	-0.43134	-0.00025788	-0.57301	-0.00034258	-1.0043	-0.00060046	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.8608	1	9801	9801		34.173	3.8548	1	6857100			50906	7891	34122	34135	57521	57521					0.11018705648416471
RRPLELPRGT	10	Unmodified	_RRPLELPRGT_					0	0	0		ENST00000416792.1_3_19:55944525-55949973:-|nuORF;ENSG00000187902|ENST00000376325|SHISA7	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8558959960938	2	597.856921	1193.69929	0.93581	0.00055948	-2.1237	-0.0012697	-1.1879	-0.00071018	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.80179	4	9176	9176;9188;9212;9415		39.253	2.4771	1	2638300			50907	7891	34122	34135	57522;57523;57524;57525	57522					0.11018705648416471
RRPLELPRGT	10	Unmodified	_RRPLELPRGT_					0	0	0		ENST00000416792.1_3_19:55944525-55949973:-|nuORF;ENSG00000187902|ENST00000376325|SHISA7	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8560180664062	2	597.856921	1193.69929	0.8216	0.0004912	-2.0016	-0.0011967	-1.18	-0.00070545	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.80179	2	9221	9221;9279		39.253	10.103	1	2486400			50908	7891	34122	34135	57526;57527	57526					0.11018705648416471
RRPLELPRGT	10	Unmodified	_RRPLELPRGT_					0	0	0		ENST00000416792.1_3_19:55944525-55949973:-|nuORF;ENSG00000187902|ENST00000376325|SHISA7	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8561401367188	2	597.856921	1193.69929	-1.2963	-0.00077498	0.15024	8.982E-05	-1.146	-0.00068516	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.70553	3	9145	9120;9145;9341		44.377	2.9506	1	2401200			50909	7891	34122	34135	57528;57529;57530	57529					0.11018705648416471
RRPLELPRGT	10	Unmodified	_RRPLELPRGT_					0	0	0		ENST00000416792.1_3_19:55944525-55949973:-|nuORF;ENSG00000187902|ENST00000376325|SHISA7	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	ENST00000416792.1_3_19:55944525-55949973:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8555908203125	2	597.856921	1193.69929	-1.2962	-0.00077492	0.5934	0.00035477	-0.70276	-0.00042015	598.3589924641743	94.317	5.5544	94.515	93.356	98.911	0.19827					368	130	4	0	0	0	0.70553	4	9438	9415;9426;9438;9555		44.377	12.847	1	9481100			50910	7891	34122	34135	57531;57532;57533;57534	57533					0.11018705648416471
RRPLIAPTLM	10	Unmodified	_RRPLIAPTLM_					0	0	0			REV__ENST00000306480.10_2_4:166000931-166006777:-|nuORF	REV__ENST00000306480.10_2_4:166000931-166006777:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.35693359375	2	584.355168	1166.69578	2.1397	0.0012504	-0.73896	-0.00043181	1.4008	0.00081854	584.3547865712267	92.649	3.0655	92.585	91.199	94.264	-0.064148					195	72	3	0	0	0	0.85466	1	9817	9817		20.947	0	1	743110	+		50911	24836	34123	34136	57535	57535					0.1191031955024755
RRPLKKREPRV	11	Unmodified	_RRPLKKREPRV_					0	0	0			REV__ENST00000483405.5_2_16:29911961-29916194:+|nuORF	REV__ENST00000483405.5_2_16:29911961-29916194:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3062438964844	3	478.975788	1433.90553	-0.59951	-0.00028715	-1.9641	-0.00094078	-2.5637	-0.0012279	479.30919988874916	53.475	3.0495	53.45	51.564	54.614	-0.02475					117	77	2	0	0	0	0.81021	1	4770	4770		9.2118	2.8909	1	217940	+		50912	27487	34124	34137	57536	57536					0.20593698547577333
RRPLKKREPRV	11	Unmodified	_RRPLKKREPRV_					0	0	0			REV__ENST00000483405.5_2_16:29911961-29916194:+|nuORF	REV__ENST00000483405.5_2_16:29911961-29916194:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.30804443359375	3	478.975788	1433.90553	0.26148	0.00012524	-3.4443	-0.0016497	-3.1828	-0.0015245	478.9741674058618	42.954	1.6917	43.019	42.201	43.892	0.065037					93	45	3	0	0	0	0.80593	1	2908	2908		10.104	0.45776	1	530890	+		50913	27487	34124	34137	57537	57537					0.20593698547577333
RRPLKKREPRV	11	Unmodified	_RRPLKKREPRV_					0	0	0			REV__ENST00000483405.5_2_16:29911961-29916194:+|nuORF	REV__ENST00000483405.5_2_16:29911961-29916194:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9737548828125	3	478.975788	1433.90553	-0.315	-0.00015088	-2.2657	-0.0010852	-2.5807	-0.0012361	478.9746652956354	49.514	1.8124	49.42	48.44	50.252	-0.093178					109	43	3	0	0	0	0.79224	1	3831	3831		12.957	3.7457	1	294110	+		50914	27487	34124	34137	57538	57538					0.20593698547577333
RRPLKKREPRV	11	Unmodified	_RRPLKKREPRV_					0	0	0			REV__ENST00000483405.5_2_16:29911961-29916194:+|nuORF	REV__ENST00000483405.5_2_16:29911961-29916194:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9746398925781	3	478.975788	1433.90553	-0.3619	-0.00017334	-1.9452	-0.00093169	-2.3071	-0.001105	478.9747142061381	50.735	1.3969	50.643	50.107	51.504	-0.091797					89	39	3	0	0	0	0.79476	1	3951	3951		12.433	0	1	284170	+		50915	27487	34124	34137	57539	57539					0.20593698547577333
RRPLLSPE	8	Unmodified	_RRPLLSPE_					0	0	0		ENST00000372324.5_1_1:44444922-44446927:+|nuORF;ENST00000497866.5_1_1:44444922-44446927:+|nuORF	ENST00000372324.5_1_1:44444922-44446927:+|nuORF	ENST00000372324.5_1_1:44444922-44446927:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.27923583984375	2	484.287808	966.561064	-0.57905	-0.00028043	2.9735	0.00144	2.3944	0.0011596	484.28987580518384	31.312	0.21834	31.392	31.209	31.428	0.079834					6	4	2	0	0	0	0.4196	1	2104	2104		35.201	16.876	1	29155			50916	10695	34125	34138	57540	57540					0.07644582399996125
RRPLRMAPLAA	11	Unmodified	_RRPLRMAPLAA_					0	0	0			REV__ENST00000483652.5_1_22:50312390-50319315:+|nuORF	REV__ENST00000483652.5_1_22:50312390-50319315:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3792724609375	2	626.376966	1250.73938	-0.052383	-3.2812E-05	4.269	0.002674	4.2166	0.0026412	626.37951872247	106.01	2.3248	106.01	105.2	107.53	0					262	53	6	0	0	0	0.68378	1	11083	11083		34.173	0.25091	1	37510000	+		50917	27496	34126	34139	57541	57541					0.1240392904737746
RRPPARSFL	9	Unmodified	_RRPPARSFL_					0	0	0			REV__ENST00000258111.4_1_12:70760360-70760789:+|nuORF	REV__ENST00000258111.4_1_12:70760360-70760789:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.3265991210938	2	550.327799	1098.64105	3.1879	0.0017544	-4.2392	-0.0023329	-1.0513	-0.00057854	550.325464553472	100.2	1.1012	100.15	99.651	100.75	-0.052353					65	24	3	0	0	0	0.76764	1	10836	10836		34.173	2.6427	1	374270	+		50918	24350	34127	34140	57542	57542					0.0956706879385365
RRPPLTEKLLS	11	Unmodified	_RRPPLTEKLLS_					0	0	0		nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1;ENSG00000204104|ENST00000373327|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.60205078125	3	437.269866	1308.78777	-1.6775	-0.00073351	-2.9878	-0.0013065	-4.6653	-0.00204	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.74405	2	4609	4609;4628		23.378	8.0404	1	2305800			50919	8413	34128	34141	57543;57544	57543					0.1457270116827658
RRPPSLDS	8	Unmodified	_RRPPSLDS_					0	0	0			REV__ENSG00000137656|ENST00000260210|BUD13	REV__ENSG00000137656|ENST00000260210|BUD13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2539367675781	2	464.253966	926.493378	-0.76573	-0.00035549	0.99904	0.00046381	0.2333	0.00010831	464.25436818414636	83.889	4.7299	84.325	82.361	87.091	0.43538					271	115	3	0	0	0	0.90465	1	9941	9941		40.573	6.4001	1	1046600	+		50920	19398	34129	34142	57545	57545					0.027191324691784757
RRPRCVTAPLP	11	Unmodified	_RRPRCVTAPLP_					0	0	0			REV__ENST00000375743.8_1_1:16270013-16270337:-|nuORF	REV__ENST00000375743.8_1_1:16270013-16270337:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3733520507812	2	633.366598	1264.71864	-0.11908	-7.5423E-05	4.2509	0.0026924	4.1318	0.0026169	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.69995	1	9471	9471		31.53	1.2121	1	2722900	+		50921	25818	34130	34143	57546	57546					0.09687338667731638
RRPRCVTAPLP	11	Unmodified	_RRPRCVTAPLP_					0	0	0			REV__ENST00000375743.8_1_1:16270013-16270337:-|nuORF	REV__ENST00000375743.8_1_1:16270013-16270337:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3682861328125	2	633.366598	1264.71864	0.88639	0.00056141	3.0311	0.0019198	3.9174	0.0024812	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.68378	2	9866	9866;9962		34.173	5.0025	1	5166300	+		50922	25818	34130	34143	57547;57548	57547					0.09687338667731638
RRPRLTPSLLM	11	Unmodified	_RRPRLTPSLLM_					0	0	0			REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	REV__nc|ENSG00000133454|Q8IUG5-3|MYO18B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.27301025390625	3	447.271213	1338.79181	2.7481	0.0012291	1.0517	0.00047038	3.7997	0.0016995	447.2715969592816	107.28	1.0213	107.25	106.57	107.59	-0.034134					90	23	5	0	0	0	0.75779	1	11865	11865		20.315	1.0523	1	9462500	+		50923	19079	34131	34144	57549	57549					0.1359646739033451
RRPRRPRRWW	10	Unmodified	_RRPRRPRRWW_					0	0	0		ENST00000372022.5_1_9:136199397-136199478:-|nuORF	ENST00000372022.5_1_9:136199397-136199478:-|nuORF	ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	507.97064208984375	3	507.967738	1520.88138	1.0427	0.00052967	2.5285	0.0012844	3.5712	0.001814	507.9689097282638	16.562	0.33526	16.639	16.523	16.858	0.07715					25	11	3	0	0	0	0.91405	1	113	113		7.0187	0	1	66568			50924	10684	34132	34145	57550	57550					0.14177902904566508
RRPRRPRRWW	10	Unmodified	_RRPRRPRRWW_					0	0	0		ENST00000372022.5_1_9:136199397-136199478:-|nuORF	ENST00000372022.5_1_9:136199397-136199478:-|nuORF	ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	507.96942138671875	3	507.967738	1520.88138	-0.52677	-0.00026758	3.9731	0.0020182	3.4463	0.0017506	507.9697227383378	16.604	0.60131	16.652	16.484	17.086	0.047802					78	25	5	0	0	0	0.88463	1	162	162		11.636	1.9898	1	1148900			50925	10684	34132	34145	57551	57551					0.14177902904566508
RRPRRRPRSW	10	Unmodified	_RRPRRRPRSW_					0	0	0			REV__ENST00000503687.2_2_7:66094097-66236887:+|nuORF	REV__ENST00000503687.2_2_7:66094097-66236887:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.95196533203125	3	474.951976	1421.8341	-0.053165	-2.5251E-05	-0.7308	-0.0003471	-0.78397	-0.00037235	474.951438871876	27.194	0.6196	27.018	26.748	27.367	-0.17559					37	13	4	0	0	0	0.86551	1	1548	1548		14.694	1.1857	1	294510	+		50926	27847	34133	34146	57552	57552					0.1400562363357949
RRPRRRRRRA	10	Unmodified	_RRPRRRRRRA_					0	0	0		ENST00000378308.6_2_X:40944993-40945185:+|nuORF	ENST00000378308.6_2_X:40944993-40945185:+|nuORF	ENST00000378308.6_2_X:40944993-40945185:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3103942871094	3	479.310387	1434.90933	-1.2686	-0.00060804	-1.2809	-0.00061395	-2.5495	-0.001222	479.3097502684534	47.94	0.94824	47.937	47.755	48.703	-0.002449					33	26	2	0	0	0	0.88106	1	4010	4010		12.207	2.9949	1	215950			50927	10862	34134	34147	57553	57553					0.20927225884656764
RRPRRRRRRA	10	Unmodified	_RRPRRRRRRA_					0	0	0		ENST00000378308.6_2_X:40944993-40945185:+|nuORF	ENST00000378308.6_2_X:40944993-40945185:+|nuORF	ENST00000378308.6_2_X:40944993-40945185:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.97601318359375	3	479.310387	1434.90933	-1.3736	-0.0006584	-1.6651	-0.00079808	-3.0387	-0.0014565	479.30948798715343	51.503	0.8999	51.515	50.87	51.77	0.012436					34	24	2	0	0	0	0.37624	1	4387	4387		14.694	4.1069	1	121540			50928	10862	34134	34147	57554	57554					0.20927225884656764
RRPSKKRRRRP	11	Unmodified	_RRPSKKRRRRP_					0	0	0			REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.6564636230469	3	498.322181	1491.94471	-0.64982	-0.00032382	-0.17482	-8.7116E-05	-0.82463	-0.00041093	498.32204903000945	49.584	1.8955	49.56	48.444	50.34	-0.024033					99	42	3	0	0	0	0.8498	1	4279	4279		6.001	0.30226	1	215190	+		50929	25199	34135	34148	57555	57555					0.21841843621791668
RRPSKKRRRRP	11	Unmodified	_RRPSKKRRRRP_					0	0	0			REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.6556091308594	3	498.322181	1491.94471	-0.61579	-0.00030686	-0.12154	-6.0565E-05	-0.73733	-0.00036743	498.3219998952032	49.831	1.8637	49.858	48.678	50.542	0.026958					119	49	3	0	0	0	0.80593	1	3949	3949		10.104	3.783	1	161210	+		50930	25199	34135	34148	57556	57556					0.21841843621791668
RRPSKKRRRRP	11	Unmodified	_RRPSKKRRRRP_					0	0	0			REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.322021484375	3	498.322181	1491.94471	0.35108	0.00017495	-0.50375	-0.00025103	-0.15267	-7.6079E-05	498.32180738572106	50.996	1.0383	51.046	50.409	51.447	0.049896					72	32	3	0	0	0	0.79224	1	4043	4043		12.957	6.9564	1	332530	+		50931	25199	34135	34148	57557	57557					0.21841843621791668
RRPSKRRGVK	10	Unmodified	_RRPSKRRGVK_					0	0	0		nc|ENSG00000116580|Q3T8J9-3|GON4L;ENSG00000116580|ENST00000368331|GON4L;nc|ENSG00000116580|Q3T8J9-2|GON4L	nc|ENSG00000116580|Q3T8J9-3|GON4L	nc|ENSG00000116580|Q3T8J9-3|GON4L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2687683105469	3	413.933811	1238.7796	-1.8891	-0.00078196	0.20707	8.5715E-05	-1.682	-0.00069624	413.9337271898945	46.64	0.69141	46.656	46.212	46.903	0.015514					28	18	2	0	0	0	0.37624	1	3456	3456		7.0187	2.113	1	105270			50932	2927	34136	34149	57558	57558					0.16976611762174798
RRPSKRRGVK	10	Unmodified	_RRPSKRRGVK_					0	0	0		nc|ENSG00000116580|Q3T8J9-3|GON4L;ENSG00000116580|ENST00000368331|GON4L;nc|ENSG00000116580|Q3T8J9-2|GON4L	nc|ENSG00000116580|Q3T8J9-3|GON4L	nc|ENSG00000116580|Q3T8J9-3|GON4L	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	413.933811	1238.7796	2.283	0.00094503	-4.2706	-0.0017677	-1.9876	-0.00082272	413.9322481676608	46.881	0.6128	46.877	46.55	47.163	-0.0041618	0.11044	-0.0039144	NaN	7.0187	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124240			50933	2927	34136	34149							0.16976611762174798
RRPSPSRSLKR	11	Unmodified	_RRPSPSRSLKR_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.27301025390625	3	447.272493	1338.79565	2.7481	0.0012291	-1.81	-0.00080956	0.93806	0.00041957	447.2715969592816	107.28	1.0213	107.25	106.57	107.59	-0.034134					90	23	5	0	0	0	0.75121	2	11913	11890;11913		21.78	4.7231	1	9462500	+		50934	18222	34137	34150	57559;57560	57560					0.1398027320840356
RRPSPSRSLKR	11	Unmodified	_RRPSPSRSLKR_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	447.2730712890625	3	447.272493	1338.79565	1.5068	0.00067396	-0.5978	-0.00026738	0.90903	0.00040658	447.2721343487067	107.14	1.0643	107.17	106.58	107.65	0.035622					102	24	6	0	0	0	0.77511	1	11772	11772		16.53	0	1	9102100	+		50935	18222	34137	34150	57561	57561					0.1398027320840356
RRPSPSRSLKR	11	Unmodified	_RRPSPSRSLKR_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2735595703125	3	447.272493	1338.79565	-1.2893	-0.00057667	1.9554	0.00087461	0.66613	0.00029794	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.75779	1	11539	11539		20.315	1.3487	1	31263000	+		50936	18222	34137	34150	57562	57562					0.1398027320840356
RRPSRRPLTG	10	Unmodified	_RRPSRRPLTG_					0	0	0			REV__nc|ENSG00000158882|Q969M1-2|TOMM40L	REV__nc|ENSG00000158882|Q969M1-2|TOMM40L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.8562622070312	2	598.360162	1194.70577	1.6651	0.0009963	-3.1424	-0.0018803	-1.4773	-0.00088398	598.3583175004217	94.283	4.5904	94.715	93.221	97.812	0.4324					199	114	2	0	0	0	0.85981	1	11148	11148		35.152	2.3396	1	27623000	+		50937	20629	34138	34151	57563	57563					0.11620643599826508
RRPSRRRRRKR	11	Unmodified	_RRPSRRRRRKR_					0	0	0			REV__ENST00000467963.5_3_5:889215-891867:-|nuORF	REV__ENST00000467963.5_3_5:889215-891867:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.35791015625	3	527.340346	1578.99921	0.2438	0.00012856	0.045229	2.3851E-05	0.28902	0.00015241	527.3404433244597	35.844	0.10902	35.947	35.878	35.987	0.10306					4	2	2	0	0	0	0.1841	1	1932	1932		3.2113	1.6883	1	19195	+		50938	15866	34139	34152	57564	57564					0.23286855493211078
RRPSVTQTD	9	Unmodified	_RRPSVTQTD_					0	0	0			REV__ENST00000448927.1_1_21:45752592-45753258:+|nuORF	REV__ENST00000448927.1_1_21:45752592-45753258:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2792358398438	2	530.280712	1058.54687	0.45501	0.00024128	-0.99561	-0.00052795	-0.5406	-0.00028667	530.2806991102823	58.965	0.78107	59.079	58.607	59.388	0.11396					65	30	3	0	0	0	0.6204	1	5051	5051		45.972	1.8554	1	246380	+		50939	26846	34140	34153	57565	57565					0.01993885181036603
RRPTVGIGG	9	Unmodified	_RRPTVGIGG_					0	0	0		nc|ENSG00000096093|Q5JVL4-2|EFHC1;nc|ENSG00000096093|Q5JVL4-3|EFHC1;ENSG00000096093|ENST00000371068|EFHC1	nc|ENSG00000096093|Q5JVL4-2|EFHC1	nc|ENSG00000096093|Q5JVL4-2|EFHC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7723388671875	2	456.772326	911.530098	0.92134	0.00042084	-0.6003	-0.0002742	0.32104	0.00014664	456.77176380852353	89.91	2.1934	89.958	88.794	90.987	0.048164					112	51	4	0	0	0	0.76996	1	9295	9295		33.516	1.5607	1	1119200			50940	1739	34141	34154	57566	57566					0.07079429085774791
RRPTVGIGG	9	Unmodified	_RRPTVGIGG_					0	0	0		nc|ENSG00000096093|Q5JVL4-2|EFHC1;nc|ENSG00000096093|Q5JVL4-3|EFHC1;ENSG00000096093|ENST00000371068|EFHC1	nc|ENSG00000096093|Q5JVL4-2|EFHC1	nc|ENSG00000096093|Q5JVL4-2|EFHC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7725830078125	2	456.772326	911.530098	0.66367	0.00030315	-0.37052	-0.00016924	0.29315	0.0001339	456.77188114676403	89.921	1.592	90.073	89.44	91.032	0.1519					92	37	4	0	0	0	0.74721	2	8993	8993;9005		37.159	7.364	1	1022900			50941	1739	34141	34154	57567;57568	57567					0.07079429085774791
RRPVGATILH	10	Unmodified	_RRPVGATILH_					0	0	0			REV__nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A	REV__nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3405151367188	2	560.340907	1118.66726	-1.4184	-0.00079481	0.23062	0.00012923	-1.1878	-0.00066558	560.3409019697357	89.331	3.0544	89.504	87.698	90.752	0.17234					137	71	4	0	0	0	0.85934	1	8893	8893		35.618	10.044	1	613340	+		50942	23390	34142	34155	57569	57569					0.11267337965318802
RRPVGIGG	8	Unmodified	_RRPVGIGG_					0	0	0		ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2481384277344	2	406.248486	810.48242	-1.9277	-0.00078311	2.2054	0.00089595	0.27775	0.00011283	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.80963	1	8880	8880		15.636	0	1	31099000			50943	10094	34143	34156	57570	57570					0.06959774885569914
RRPVGIGG	8	Unmodified	_RRPVGIGG_					0	0	0		ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2491149902344	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.82464	2	10485	10485;10496		37.028	8.7742	1	28266000			50944	10094	34143	34156	57571;57572	57571					0.06959774885569914
RRPVGIGG	8	Unmodified	_RRPVGIGG_					0	0	0		ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2485046386719	2	406.248486	810.48242	3.1451	0.0012777	-2.8339	-0.0011513	0.31112	0.00012639	406.2472569987741	110.94	0.91206	110.99	110.73	111.64	0.054062					48	31	2	0	0	0	0.82464	1	13432	13432		21.702	0	1	457940			50945	10094	34143	34156	57573	57573					0.06959774885569914
RRPVGIGG	8	Unmodified	_RRPVGIGG_					0	0	0		ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.24859619140625	2	406.248486	810.48242	-1.235	-0.0005017	1.527	0.00062034	0.29202	0.00011863	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.82464	3	10480	10480;10516;10590		21.702	4.3374	1	38125000			50946	10094	34143	34156	57574;57575;57576	57574					0.06959774885569914
RRPVGIGGT	9	Unmodified	_RRPVGIGGT_					0	0	0		ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7723083496094	2	456.772326	911.530098	1.381	0.0006308	-0.41389	-0.00018905	0.96711	0.00044175	456.7715202988468	90.098	2.3552	90.028	88.797	91.153	-0.069977					132	55	5	0	0	0	0.64922	2	9426	9426;9438		44.117	8.4985	1	1094100			50947	10094	34144	34157	57577;57578	57577					0.07079429085752054
RRPVGIGGT	9	Unmodified	_RRPVGIGGT_					0	0	0		ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7724609375	2	456.772326	911.530098	0.92134	0.00042084	-0.6003	-0.0002742	0.32104	0.00014664	456.77176380852353	89.91	2.1934	89.958	88.794	90.987	0.048164					112	51	4	0	0	0	0.72402	1	9307	9307		38.806	6.8513	1	1119200			50948	10094	34144	34157	57579	57579					0.07079429085752054
RRPVGIGGT	9	Unmodified	_RRPVGIGGT_					0	0	0		ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7724914550781	2	456.772326	911.530098	-1.1567	-0.00052834	1.2544	0.00057299	0.097763	4.4655E-05	456.7726883987969	89.791	2.1769	90.003	88.879	91.056	0.21271					109	51	4	0	0	0	0.72402	1	9002	9002		38.806	1.647	1	1072500			50949	10094	34144	34157	57580	57580					0.07079429085752054
RRPVGIGGT	9	Unmodified	_RRPVGIGGT_					0	0	0		ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	ENST00000328914.4_1_7:4802101-4802248:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	456.772326	911.530098	0.3199	0.00014612	0.78225	0.00035731	1.1022	0.00050343	456.77225319123676	89.732	0.87585	90.183	89.652	90.528	0.45058	0.073924	0.0002015	NaN	44.117	36	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	956160			50950	10094	34144	34157							0.07079429085752054
RRPVLDAS	8	Unmodified	_RRPVLDAS_					0	0	0			REV__chr8:134565152-134565333|13|11.31|0.51|4.48|-|ENST00000523243|ZFAT,ZFAT	REV__chr8:134565152-134565333|13|11.31|0.51|4.48|-|ENST00000523243|ZFAT,ZFAT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.261962890625	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.87922	1	9743	9743		31.955	1.4512	1	3505500	+		50951	15918	34145	34158	57581	57581					0.05435722848858404
RRPVLGTAS	9	Unmodified	_RRPVLGTAS_					0	0	0		nc|ENSG00000164574|Q86SR1-3|GALNT10	nc|ENSG00000164574|Q86SR1-3|GALNT10	nc|ENSG00000164574|Q86SR1-3|GALNT10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.7856140136719	2	478.785433	955.556313	-0.098425	-4.7125E-05	1.3612	0.00065172	1.2628	0.00060459	478.78530530827464	92.434	2.0709	92.504	91.595	93.666	0.06987					117	48	4	0	0	0	0.74721	1	9546	9546		37.159	9.2769	1	727550			50952	15060	34146	34159	57582	57582					0.07675698257241947
RRPVPRRAKVK	11	Unmodified	_RRPVPRRAKVK_					0	0	0			REV__ENSG00000173575|ENST00000394196|CHD2	REV__ENSG00000173575|ENST00000394196|CHD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.96356201171875	3	454.968745	1361.8844	-1.5749	-0.00071655	-3.0019	-0.0013658	-4.5768	-0.0020823	454.9672336092607	41.073	1.0297	41.707	41.324	42.354	0.6339					72	28	5	0	0	0	0.81219	1	3568	3568		8.7993	0.39205	1	10012000	+		50953	21933	34147	34160	57583	57583					0.2179373323872369
RRPVSPSA	8	Unmodified	_RRPVSPSA_					0	0	0		ENST00000388968.7_1_2:198363538-198364568:-|nuORF	ENST00000388968.7_1_2:198363538-198364568:-|nuORF	ENST00000388968.7_1_2:198363538-198364568:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2516174316406	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.87479	1	9146	9146		30.504	0	1	2020200			50954	10987	34148	34161	57584	57584					0.04839453677379879
RRPVTLTT	8	Unmodified	_RRPVTLTT_					0	0	0			REV__ENSG00000135999|ENST00000258484|EPC2	REV__ENSG00000135999|ENST00000258484|EPC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2865295410156	2	472.287808	942.561064	-1.7052	-0.00080535	2.0866	0.00098547	0.38138	0.00018012	472.2887688366916	99.113	1.9296	99.299	98.808	100.74	0.18582					95	44	3	0	0	0	0.7961	1	10325	10325		17.365	0	1	583920	+		50955	19278	34149	34162	57585	57585					0.08748582399982752
RRPVTLTT	8	Unmodified	_RRPVTLTT_					0	0	0			REV__ENSG00000135999|ENST00000258484|EPC2	REV__ENSG00000135999|ENST00000258484|EPC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2871398925781	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.79929	1	12693	12693		18.324	1.8513	1	3080300	+		50956	19278	34149	34162	57586	57586					0.08748582399982752
RRQALISS	8	Unmodified	_RRQALISS_					0	0	0			REV__nc|ENSG00000117676|Q15418-3|RPS6KA1	REV__nc|ENSG00000117676|Q15418-3|RPS6KA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7778625488281	2	465.777608	929.540663	-1.4399	-0.00067067	1.3241	0.00061674	-0.1158	-5.3938E-05	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.80706	1	7473	7473		19.36	0	1	287800	+		50957	18276	34150	34163	57587	57587					0.07307411740191583
RRQCLLLEK	9	Unmodified	_RRQCLLLEK_					0	0	0			REV__ENST00000503823.5_2_4:20255177-20255336:+|nuORF	REV__ENST00000503823.5_2_4:20255177-20255336:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	579.84375	2	579.842425	1157.6703	-0.30572	-0.00017727	2.6915	0.0015607	2.3858	0.0013834	579.8442285460155	102.54	1.4926	102.54	101.62	103.11	0					80	37	4	0	0	0	0.7932	1	10529	10529		24.519	0	1	838830	+		50958	27849	34151	34164	57588	57588					0.09776845027840864
RRQDAERKR	9	Unmodified	_RRQDAERKR_					0	0	0			REV__ENST00000356458.6_1_2:55186284-55189696:+|nuORF	REV__ENST00000356458.6_1_2:55186284-55189696:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.56549072265625	3	405.565676	1213.6752	-0.18903	-7.6663E-05	-2.0784	-0.00084294	-2.2675	-0.0009196	405.56470246140424	60.148	1.7799	60.134	59.159	60.939	-0.013729					123	48	3	0	0	0	0.78124	1	5522	5522		30.318	5.7985	1	242840	+		50959	25390	34152	34165	57589	57589					0.07690865214772202
RRQFGGHLATT	11	Unmodified	_RRQFGGHLATT_					0	0	0			REV__ENST00000475339.1_1_2:220085171-220086945:-|nuORF	REV__ENST00000475339.1_1_2:220085171-220086945:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3367919921875	2	622.336353	1242.65815	0.74466	0.00046343	-0.51938	-0.00032323	0.22528	0.0001402	622.3359336056161	110.94	1.6886	110.97	110.28	111.96	0.031738					155	57	4	0	0	0	0.62914	1	12203	12203		24.519	13.008	1	299380	+		50960	23418	34153	34166	57590	57590					0.046529446090062265
RRQGRPSKVV	10	Unmodified	_RRQGRPSKVV_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.8645629882812	2	591.862538	1181.71052	0.22841	0.00013518	2.8018	0.0016583	3.0302	0.0017934	591.8643633910696	36.472	1.3667	36.754	35.89	37.257	0.28173					67	33	3	0	0	0	0.57924	1	2865	2865		51.193	1.7511	1	1105800	+		50961	29943	34154	34167	57591	57591					0.1269352774259005
RRQHLQVHR	9	Unmodified	_RRQHLQVHR_					0	0	0		ENSG00000197037|ENST00000394152|ZSCAN25;nc|ENSG00000197037|Q6NSZ9-2|ZSCAN25;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25	ENSG00000197037|ENST00000394152|ZSCAN25	ENSG00000197037|ENST00000394152|ZSCAN25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.3574829101562	2	615.357954	1228.70135	1.2106	0.00074497	-1.8743	-0.0011533	-0.66365	-0.00040838	615.3568978915573	104.33	3.2029	104.5	103.73	106.93	0.17096					209	79	4	0	0	0	0.78058	1	11068	11068		30.504	0.18592	1	3137500			50962	8126	34155	34168	57592	57592					0.09615179176921629
RRQILLLQRRP	11	Unmodified	_RRQILLLQRRP_					0	0	0		ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.6459655761719	3	483.647671	1447.92118	-1.6265	-0.00078667	-1.0559	-0.00051067	-2.6824	-0.0012973	483.64706776464374	46.522	1.6286	46.522	46.06	47.688	0					186	51	5	0	0	0	0.80593	1	3548	3548		10.104	0.45776	1	4540800			50963	12915	34156	34169	57593	57593					0.2151398506462101
RRQILLLQRRP	11	Unmodified	_RRQILLLQRRP_					0	0	0		ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.64617919921875	3	483.647671	1447.92118	-1.6009	-0.00077425	-0.97695	-0.0004725	-2.5778	-0.0012468	483.64708308420245	48.306	2.7356	48.306	47.6	50.336	0					237	72	5	0	0	0	0.8398	1	3785	3785		6.6596	0.33873	1	1611600			50964	12915	34156	34169	57594	57594					0.2151398506462101
RRQILLLQRRP	11	Unmodified	_RRQILLLQRRP_					0	0	0		ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.6460876464844	3	483.647671	1447.92118	0.1589	7.6851E-05	-2.8617	-0.001384	-2.7028	-0.0013072	483.6461692650574	46.582	1.726	46.568	46.059	47.785	-0.013821					190	48	5	0	0	0	0.81021	1	3806	3806		9.2118	0.41249	1	4073800			50965	12915	34156	34169	57595	57595					0.2151398506462101
RRQILLLQRRP	11	Unmodified	_RRQILLLQRRP_					0	0	0		ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.6465148925781	3	483.647671	1447.92118	0.10651	5.1514E-05	-2.5035	-0.0012108	-2.3969	-0.0011593	483.6463288941527	48.079	2.6896	48.07	47.738	50.428	-0.0093269					180	66	5	0	0	0	0.80593	2	3986	3986;3998		10.104	3.0852	1	2577700			50966	12915	34156	34169	57596;57597	57596					0.2151398506462101
RRQILLLQRRP	11	Unmodified	_RRQILLLQRRP_					0	0	0		ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.647216796875	3	483.647671	1447.92118	-1.6199	-0.00078345	-1.0977	-0.0005309	-2.7176	-0.0013144	483.64701567342865	46.699	1.7316	46.695	46.155	47.886	-0.0041618					198	50	6	0	0	0	0.80593	2	3949	3902;3949		10.104	4.691	1	5137200			50967	12915	34156	34169	57598;57599	57599					0.2151398506462101
RRQILLLQRRP	11	Unmodified	_RRQILLLQRRP_					0	0	0		ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.64666748046875	3	483.647671	1447.92118	-1.5595	-0.00075426	-1.0418	-0.00050386	-2.6013	-0.0012581	483.6470312482302	48.336	2.6056	48.333	47.817	50.423	-0.002449					214	62	5	0	0	0	0.78391	3	3962	3962;4035;4072		14.694	4.1069	1	2393300			50968	12915	34156	34169	57600;57601;57602	57600					0.2151398506462101
RRQILLLQRRP	11	Unmodified	_RRQILLLQRRP_					0	0	0		ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.64617919921875	3	483.647671	1447.92118	-0.83799	-0.00040529	-1.7948	-0.00086806	-2.6328	-0.0012733	483.646679966578	46.367	1.8019	46.382	45.827	47.628	0.015514					182	51	6	0	0	0	0.8398	1	3384	3384		6.6596	0.96083	1	4521700			50969	12915	34156	34169	57603	57603					0.2151398506462101
RRQILLLQRRP	11	Unmodified	_RRQILLLQRRP_					0	0	0		ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.6461181640625	3	483.647671	1447.92118	0.29802	0.00014413	-2.9248	-0.0014146	-2.6268	-0.0012704	483.6461229931169	46.466	1.647	46.505	45.984	47.631	0.038181					176	46	5	0	0	0	0.84494	1	3425	3425		6.3209	0	1	4692700			50970	12915	34156	34169	57604	57604					0.2151398506462101
RRQILLLQRRP	11	Unmodified	_RRQILLLQRRP_					0	0	0		ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.6462097167969	3	483.647671	1447.92118	-0.19648	-9.5025E-05	-2.4553	-0.0011875	-2.6518	-0.0012825	483.6463549494067	46.472	1.6155	46.393	45.933	47.548	-0.079002					182	48	5	0	0	0	0.73621	2	3493	3406;3493		25.126	14.539	1	4742900			50971	12915	34156	34169	57605;57606	57606					0.2151398506462101
RRQILLLQRRP	11	Unmodified	_RRQILLLQRRP_					0	0	0		ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.64581298828125	3	483.647671	1447.92118	-1.5634	-0.00075612	-2.0746	-0.0010034	-3.638	-0.0017595	483.6466147917682	44.248	1.3424	45.092	44.653	45.995	0.84438					150	32	6	0	0	0	0.78683	1	4129	4129		14.086	0	1	35535000			50972	12915	34156	34169	57607	57607					0.2151398506462101
RRQKEQIYDKK	11	Unmodified	_RRQKEQIYDKK_					0	0	0			REV__nc|ENSG00000089195|Q9UJA5-2|TRMT6	REV__nc|ENSG00000089195|Q9UJA5-2|TRMT6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.95147705078125	3	497.951196	1490.83176	-0.23329	-0.00011617	-0.065396	-3.2564E-05	-0.29869	-0.00014873	497.9511036347425	24.221	1.0288	24.175	23.523	24.551	-0.04598					53	23	4	0	0	0	0.76892	1	931	931		17.833	0.6664	1	99074	+		50973	16965	34157	34170	57608	57608					0.1059768559459826
RRQKIEELKL	10	Unmodified	_RRQKIEELKL_					0	0	0		ENSG00000137812|ENST00000399668|KNL1;nc|ENSG00000137812|Q8NG31|KNL1	ENSG00000137812|ENST00000399668|KNL1	ENSG00000137812|ENST00000399668|KNL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2731628417969	3	438.273499	1311.79867	0.73903	0.0003239	-2.0576	-0.00090178	-1.3185	-0.00057788	438.2725101796097	107.07	1.2292	107.16	106.69	107.92	0.091255					130	29	5	0	0	0	0.86338	1	11460	11460		31.634	1.0654	1	4759800			50974	4238	34158	34171	57609	57609					0.1552410354256608
RRQKKRAEQEL	11	Unmodified	_RRQKKRAEQEL_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.28216552734375	3	481.283057	1440.82734	-0.8353	-0.00040201	1.1543	0.00055557	0.31905	0.00015355	481.2835872163677	101.92	1.5231	101.92	100.91	102.43	0					93	37	3	0	0	0	0.77205	1	10385	10385		17.167	4.2093	1	462650	+		50975	16084	34159	34172	57610	57610					0.1245622117169205
RRQKKRAEQEL	11	Unmodified	_RRQKKRAEQEL_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.2824401855469	3	481.283057	1440.82734	2.7369	0.0013172	-2.6567	-0.0012786	0.080195	3.8596E-05	481.2817189970154	101.62	1.8989	101.57	100.36	102.26	-0.049828					113	44	3	0	0	0	0.74771	2	11106	11082;11106		22.562	2.5311	1	536510	+		50976	16084	34159	34172	57611;57612	57612					0.1245622117169205
RRQKKRAEQEL	11	Unmodified	_RRQKKRAEQEL_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.28271484375	3	481.283057	1440.82734	-0.57529	-0.00027688	0.63408	0.00030517	0.058786	2.8293E-05	481.28331893775436	101.47	1.933	101.51	100.25	102.18	0.044815					108	45	4	0	0	0	0.73277	2	10976	10963;10976		25.892	8.0586	1	479720	+		50977	16084	34159	34172	57613;57614	57614					0.1245622117169205
RRQKKRAEQEL	11	Unmodified	_RRQKKRAEQEL_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.28289794921875	3	481.283057	1440.82734	-0.77355	-0.0003723	0.85002	0.0004091	0.076464	3.6801E-05	481.28339459501956	101.39	1.951	101.6	100.24	102.19	0.2058					116	46	4	0	0	0	0.77511	2	10635	10635;10647		16.53	3.0219	1	699120	+		50978	16084	34159	34172	57615;57616	57615					0.1245622117169205
RRQKKRAEQEL	11	Unmodified	_RRQKKRAEQEL_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.2830810546875	3	481.283057	1440.82734	-0.7743	-0.00037266	1.518	0.0007306	0.74373	0.00035795	481.2837549542837	102.74	2.1503	102.93	102.14	104.29	0.19484					128	53	4	0	0	0	0.75121	1	10790	10790		21.78	3.2494	1	1226400	+		50979	16084	34159	34172	57617	57617					0.1245622117169205
RRQKKRAEQEL	11	Unmodified	_RRQKKRAEQEL_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.2828674316406	3	481.283057	1440.82734	0.78447	0.00037755	-0.63085	-0.00030362	0.15362	7.3933E-05	481.2826753418143	101.45	1.7107	101.6	100.6	102.31	0.14352					107	41	3	0	0	0	0.6593	1	10668	10668		37.6	16.568	1	602290	+		50980	16084	34159	34172	57618	57618					0.1245622117169205
RRQKKRAEQEL	11	Unmodified	_RRQKKRAEQEL_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.2834167480469	3	481.283057	1440.82734	-1.6759	-0.00080659	1.7431	0.00083894	0.067207	3.2345E-05	481.28381060861284	101.58	1.5224	101.74	100.8	102.32	0.15505					100	37	3	0	0	0	0.75121	1	10619	10619		21.78	4.6137	1	436410	+		50981	16084	34159	34172	57619	57619					0.1245622117169205
RRQKKRAEQEL	11	Unmodified	_RRQKKRAEQEL_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.28289794921875	3	481.283057	1440.82734	-1.6759	-0.0008066	2.7111	0.0013048	1.0352	0.0004982	481.2841599941505	102.78	1.5282	102.92	102.18	103.71	0.13569					101	38	5	0	0	0	0.77803	1	10775	10775		15.921	2.4127	1	918230	+		50982	16084	34159	34172	57620	57620					0.1245622117169205
RRQKKRAEQEL	11	Unmodified	_RRQKKRAEQEL_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	481.283057	1440.82734	2.0628	0.00099277	-1.468	-0.00070654	0.59474	0.00028624	481.2825024151057	101.08	0.97344	101.38	100.49	101.46	0.2999	-0.27308	-0.0023784	NaN	37.6	58	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	290270	+		50983	16084	34159	34172							0.1245622117169205
RRQKKRAEQEL	11	Unmodified	_RRQKKRAEQEL_					0	0	0			REV__nc|ENSG00000005379|O95153-2|TSPOAP1	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	481.283057	1440.82734	1.9571	0.00094193	-2.4792	-0.0011932	-0.52209	-0.00025127	481.2819444134294	101.52	0.43893	101.84	101.63	102.07	0.32511	0.18542	-0.0038384	NaN	37.6	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	460590	+		50984	16084	34159	34172							0.1245622117169205
RRQKLEDS	8	Unmodified	_RRQKLEDS_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3140258789062	2	516.283254	1030.55196	-0.68559	-0.00035396	2.9575	0.0015269	2.2719	0.0011729	516.2849121059581	99.45	0.41287	99.45	99.222	99.635	0					19	9	3	0	0	0	0.4196	1	10066	10066		38.806	0	1	150420			50985	8189	34160	34173	57621	57621					0.03790189043661485
RRQKREKHK	9	Unmodified	_RRQKREKHK_					0	0	0		nc|ENSG00000132970|Q9UPY6-2|WASF3	nc|ENSG00000132970|Q9UPY6-2|WASF3	nc|ENSG00000132970|Q9UPY6-2|WASF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5925598144531	3	422.593566	1264.75887	-1.7406	-0.00073557	-0.38953	-0.00016461	-2.1301	-0.00090018	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.7932	1	3971	3971		25.574	1.0549	1	1126900			50986	14924	34161	34174	57622	57622					0.13708021382490188
RRQKREKHK	9	Unmodified	_RRQKREKHK_					0	0	0		nc|ENSG00000132970|Q9UPY6-2|WASF3	nc|ENSG00000132970|Q9UPY6-2|WASF3	nc|ENSG00000132970|Q9UPY6-2|WASF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5928649902344	3	422.593566	1264.75887	-0.12961	-5.4774E-05	-0.95032	-0.0004016	-1.0799	-0.00045637	422.59301325163335	54.438	1.5298	54.43	53.553	55.082	-0.0077057					142	48	4	0	0	0	0.7932	1	4792	4792		21.686	0	1	1173800			50987	14924	34161	34174	57623	57623					0.13708021382490188
RRQKREKHK	9	Unmodified	_RRQKREKHK_					0	0	0		nc|ENSG00000132970|Q9UPY6-2|WASF3	nc|ENSG00000132970|Q9UPY6-2|WASF3	nc|ENSG00000132970|Q9UPY6-2|WASF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.59234619140625	3	422.593566	1264.75887	-1.8214	-0.00076972	-0.3027	-0.00012792	-2.1241	-0.00089764	422.5933529014654	49.394	1.9735	49.419	48.567	50.541	0.025574					182	52	4	0	0	0	0.7932	1	3847	3847		24.519	0	1	2033600			50988	14924	34161	34174	57624	57624					0.13708021382490188
RRQKREKHK	9	Unmodified	_RRQKREKHK_					0	0	0		nc|ENSG00000132970|Q9UPY6-2|WASF3	nc|ENSG00000132970|Q9UPY6-2|WASF3	nc|ENSG00000132970|Q9UPY6-2|WASF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5927734375	3	422.593566	1264.75887	-0.50952	-0.00021532	-1.6488	-0.00069677	-2.1583	-0.00091209	422.59276833389157	49.547	2.3163	49.454	48.483	50.799	-0.093178					199	59	5	0	0	0	0.76419	1	3859	3859		35.152	5.0129	1	1796900			50989	14924	34161	34174	57625	57625					0.13708021382490188
RRQKRERRKRR	11	Unmodified	_RRQKRERRKRR_					0	0	0			REV__ENSG00000130764|ENST00000378251|LRRC47	REV__ENSG00000130764|ENST00000378251|LRRC47	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	407.2868347167969	4	407.009636	1624.00944	-1.8578	-0.00075613	-2.9629	-0.0012059	-4.8207	-0.0019621	407.25866949055404	64.324	0.15197	64.444	64.37	64.522	0.12004					7	5	2	0	0	0	0.18408	1	5662	5662		3.4087	0	1	39754	+		50990	18904	34162	34175	57626	57626					0.22239418427784585
RRQKRERRKRR	11	Unmodified	_RRQKRERRKRR_					0	0	0			REV__ENSG00000130764|ENST00000378251|LRRC47	REV__ENSG00000130764|ENST00000378251|LRRC47	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	407.2875061035156	4	407.009636	1624.00944	0.40463	0.00016469	-3.1335	-0.0012754	-2.7288	-0.0011107	407.2590310381154	64.224	0.20986	64.348	64.284	64.494	0.12397					9	8	2	0	0	0	0.18413	1	5662	5662		1.2319	0	1	40520	+		50991	18904	34162	34175	57627	57627					0.22239418427784585
RRQKTHVPML	10	Unmodified	_RRQKTHVPML_					0	0	0		ENSG00000136937|ENST00000375147|NCBP1	ENSG00000136937|ENST00000375147|NCBP1	ENSG00000136937|ENST00000375147|NCBP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3690185546875	2	633.366598	1264.71864	-0.087569	-5.5464E-05	4.167	0.0026393	4.0795	0.0025838	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.74274	2	9755	9755;9767		42.396	7.2441	1	7059800			50992	4162	34163	34176	57628;57629	57628					0.09687338667731638
RRQKTHVPML	10	Unmodified	_RRQKTHVPML_					0	0	0		ENSG00000136937|ENST00000375147|NCBP1	ENSG00000136937|ENST00000375147|NCBP1	ENSG00000136937|ENST00000375147|NCBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3690185546875	2	633.366598	1264.71864	1.4714	0.00093196	2.5393	0.0016083	4.0108	0.0025403	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.86446	1	10097	10097		25.574	2.0514	1	11430000			50993	4162	34163	34176	57630	57630					0.09687338667731638
RRQLLLFAF	9	Unmodified	_RRQLLLFAF_					0	0	0			REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3539428710938	2	582.356025	1162.6975	-1.3468	-0.00078434	-2.7668	-0.0016113	-4.1137	-0.0023956	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.7932	1	12883	12883		24.203	6.7347	1	3937500	+		50994	20406	34164	34177	57631	57631					0.12265696630493039
RRQLRERLSDL	11	Unmodified	_RRQLRERLSDL_					0	0	0			REV__ENSG00000165819|ENST00000298717|METTL3	REV__ENSG00000165819|ENST00000298717|METTL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.28253173828125	3	481.283057	1440.82734	-0.81885	-0.0003941	1.7968	0.00086478	0.97797	0.00047068	481.2839595795984	103	2.1104	103	102.28	104.39	0					111	52	3	0	0	0	0.76579	1	10550	10550		18.531	1.3643	1	1092200	+		50995	21225	34165	34178	57632	57632					0.1245622117169205
RRQLVKLVNL	10	Unmodified	_RRQLVKLVNL_					0	0	0		nc|ENSG00000089177|Q96L93-4|KIF16B;ENSG00000089177|ENST00000354981|KIF16B;nc|ENSG00000089177|Q96L93-6|KIF16B;nc|ENSG00000089177|Q96L93-2|KIF16B	nc|ENSG00000089177|Q96L93-4|KIF16B	nc|ENSG00000089177|Q96L93-4|KIF16B	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7672119140625	3	413.606701	1237.79827	-1.8865	-0.00078026	-2.4203	-0.0010011	-4.3068	-0.0017813	413.60558750027144	39.589	0.97531	39.589	39.266	40.241	0					33	23	2	0	0	0	0.37624	1	2594	2594		33.922	12.236	1	56060			50996	1615	34166	34179	57633	57633					0.18888728613364947
RRQPERLRSSI	11	Unmodified	_RRQPERLRSSI_					0	0	0			REV__ENST00000520277.1_1_8:75896934-75898275:+|nuORF	REV__ENST00000520277.1_1_8:75896934-75898275:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.608154296875	3	466.607652	1396.80113	2.578	0.0012029	-1.754	-0.00081844	0.82393	0.00038445	466.60668985200886	100.48	2.1594	100.43	99.202	101.36	-0.052116					162	50	4	0	0	0	0.76579	1	10906	10906		18.531	0.69791	1	531470	+		50997	24412	34167	34180	57634	57634					0.11859952000213525
RRQPERLRSSI	11	Unmodified	_RRQPERLRSSI_					0	0	0			REV__ENST00000520277.1_1_8:75896934-75898275:+|nuORF	REV__ENST00000520277.1_1_8:75896934-75898275:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.60821533203125	3	466.607652	1396.80113	0.32068	0.00014963	0.39943	0.00018638	0.72011	0.00033601	466.60769889886956	100.37	2.2833	100.42	99.018	101.3	0.046356					147	53	4	0	0	0	0.72374	2	10764	10764;10801		27.644	7.3289	1	458180	+		50998	24412	34167	34180	57635;57636	57635					0.11859952000213525
RRQPERLRSSI	11	Unmodified	_RRQPERLRSSI_					0	0	0			REV__ENST00000520277.1_1_8:75896934-75898275:+|nuORF	REV__ENST00000520277.1_1_8:75896934-75898275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.60858154296875	3	466.607652	1396.80113	-0.99183	-0.00046279	1.8657	0.00087056	0.87389	0.00040777	466.6084303998886	100.17	2.2081	100.39	99.16	101.37	0.21511					171	52	4	0	0	0	0.74405	1	10460	10460		23.378	5.5448	1	609920	+		50999	24412	34167	34180	57637	57637					0.11859952000213525
RRQPERLRSSI	11	Unmodified	_RRQPERLRSSI_					0	0	0			REV__ENST00000520277.1_1_8:75896934-75898275:+|nuORF	REV__ENST00000520277.1_1_8:75896934-75898275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.60791015625	3	466.607652	1396.80113	0.76537	0.00035713	0.049947	2.3306E-05	0.81531	0.00038043	466.60758822103855	100.27	2.2686	100.42	99.189	101.46	0.15073					150	53	4	0	0	0	0.79224	1	10409	10409		12.957	1.5029	1	578170	+		51000	24412	34167	34180	57638	57638					0.11859952000213525
RRQPERLRSSI	11	Unmodified	_RRQPERLRSSI_					0	0	0			REV__ENST00000520277.1_1_8:75896934-75898275:+|nuORF	REV__ENST00000520277.1_1_8:75896934-75898275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.6080627441406	3	466.607652	1396.80113	-1.7237	-0.0008043	2.39	0.0011152	0.66626	0.00031088	466.60870138635494	100.22	2.0707	100.39	99.305	101.38	0.17199					124	48	3	0	0	0	0.74405	1	10438	10438		23.378	4.1152	1	463800	+		51001	24412	34167	34180	57639	57639					0.11859952000213525
RRQPGKPRRG	10	Unmodified	_RRQPGKPRRG_					0	0	0		ENST00000473958.1_1_3:128208233-128208692:+|nuORF;ENST00000468377.1_1_3:128208233-128208692:+|nuORF	ENST00000473958.1_1_3:128208233-128208692:+|nuORF	ENST00000473958.1_1_3:128208233-128208692:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2469177246094	3	403.246278	1206.717	-0.18602	-7.5014E-05	1.7373	0.00070057	1.5513	0.00062556	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.86763	1	11296	11296		19.263	0	1	12308000			51002	12175	34168	34181	57640	57640					0.12191465693967984
RRQPGKPRRG	10	Unmodified	_RRQPGKPRRG_					0	0	0		ENST00000473958.1_1_3:128208233-128208692:+|nuORF;ENST00000468377.1_1_3:128208233-128208692:+|nuORF	ENST00000473958.1_1_3:128208233-128208692:+|nuORF	ENST00000473958.1_1_3:128208233-128208692:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.24700927734375	3	403.246278	1206.717	-1.7912	-0.0007223	3.2664	0.0013171	1.4751	0.00059485	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.8486	1	11186	11186		12.957	0	1	20673000			51003	12175	34168	34181	57641	57641					0.12191465693967984
RRQPGKPRRG	10	Unmodified	_RRQPGKPRRG_					0	0	0		ENST00000473958.1_1_3:128208233-128208692:+|nuORF;ENST00000468377.1_1_3:128208233-128208692:+|nuORF	ENST00000473958.1_1_3:128208233-128208692:+|nuORF	ENST00000473958.1_1_3:128208233-128208692:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3670043945312	2	604.365779	1206.717	1.0495	0.00063426	0.081345	4.9162E-05	1.1308	0.00068342	604.3654815369778	107.84	0.75342	107.98	107.32	108.07	0.13866					71	18	5	0	0	0	0.85466	1	11517	11517		20.947	6.8098	1	18755000			51004	12175	34168	34181	57642	57642					0.12191465693967984
RRQPGKPRRG	10	Unmodified	_RRQPGKPRRG_					0	0	0		ENST00000473958.1_1_3:128208233-128208692:+|nuORF;ENST00000468377.1_1_3:128208233-128208692:+|nuORF	ENST00000473958.1_1_3:128208233-128208692:+|nuORF	ENST00000473958.1_1_3:128208233-128208692:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2467956542969	3	403.246278	1206.717	0.73411	0.00029603	0.73949	0.00029819	1.4736	0.00059422	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.86763	1	11135	11135		19.263	0	1	18617000			51005	12175	34168	34181	57643	57643					0.12191465693967984
RRQPVGRRQL	10	Unmodified	_RRQPVGRRQL_					0	0	0		ENST00000536441.6_2_11:94926684-94964088:-|nuORF	ENST00000536441.6_2_11:94926684-94964088:-|nuORF	ENST00000536441.6_2_11:94926684-94964088:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5925598144531	3	422.593566	1264.75887	-0.50952	-0.00021532	-1.6488	-0.00069677	-2.1583	-0.00091209	422.59276833389157	49.547	2.3163	49.454	48.483	50.799	-0.093178					199	59	5	0	0	0	0.86802	1	3813	3813		27.047	1.9213	1	1796900			51006	13438	34169	34182	57644	57644					0.13708021382512925
RRQRDRQELRE	11	Unmodified	_RRQRDRQELRE_					0	0	0			REV__ENSG00000159450|ENST00000614923|TCHH	REV__ENSG00000159450|ENST00000614923|TCHH	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.3042602539062	3	514.617099	1540.82947	0.73483	0.00037816	3.1195	0.0016053	3.8543	0.0019835	514.6194361688798	66.755	0.18436	67.14	67.051	67.235	0.38515					5	4	2	0	0	0	0.17882	1	7287	7287		26.75	10.829	1	86692	+		51007	20662	34170	34183	57645	57645					0.08068649909500891
RRQRFLER	8	Unmodified	_RRQRFLER_					0	0	0		nc|ENSG00000170653|P17544-2|ATF7;nc|ENSG00000170653|P17544-3|ATF7;ENSG00000170653|ENST00000420353|ATF7;nc|ENSG00000170653|P17544-1|ATF7;ENST00000546661.1_1_12:53910923-53918651:-|nuORF;nc|ENSG00000170653|P17544-4|ATF7	nc|ENSG00000170653|P17544-2|ATF7	nc|ENSG00000170653|P17544-2|ATF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.8399047851562	2	580.841605	1159.66866	0.60129	0.00034925	-2.4927	-0.0014479	-1.8914	-0.0010986	580.839949137506	69.631	0.83281	69.76	69.457	70.29	0.1291					104	40	3	0	0	0	0.84341	1	6309	6309		24.203	0.68005	1	14222000			51008	6607	34171	34184	57646	57646					0.09520972054087906
RRQRLGFV	8	Unmodified	_RRQRLGFV_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3135375976562	2	516.314692	1030.61483	0.876	0.00045229	-2.6093	-0.0013472	-1.7333	-0.00089492	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.86288	1	10901	10901		26.796	2.5934	1	67025000			51009	1741	34172	34185	57647	57647					0.10074799622361752
RRQRLGFV	8	Unmodified	_RRQRLGFV_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3143920898438	2	516.314692	1030.61483	0.87306	0.00045078	-1.9416	-0.0010025	-1.0686	-0.00055171	516.313661473355	102.18	1.1387	102.22	101.81	102.94	0.043198					71	27	3	0	0	0	0.86288	2	11093	11082;11093		28.254	4.7316	1	705960			51010	1741	34172	34185	57648;57649	57649					0.10074799622361752
RRQRLGFV	8	Unmodified	_RRQRLGFV_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3138427734375	2	516.314692	1030.61483	0.81864	0.00042267	-1.9872	-0.001026	-1.1686	-0.00060335	516.3135947493408	102.18	1.1683	102.31	101.93	103.1	0.13523					75	28	3	0	0	0	0.86791	1	10710	10710		28.254	1.5614	1	1280900			51011	1741	34172	34185	57650	57650					0.10074799622361752
RRQRLGFV	8	Unmodified	_RRQRLGFV_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3133544921875	2	516.314692	1030.61483	-1.5618	-0.0008064	0.77244	0.00039882	-0.78941	-0.00040758	516.315128223729	103.33	1.0546	103.45	103.07	104.12	0.11494					63	26	3	0	0	0	0.89457	1	10880	10880		37.028	1.8278	1	813320			51012	1741	34172	34185	57651	57651					0.10074799622361752
RRQRRCNRFLR	11	Unmodified	_RRQRRCNRFLR_					0	0	0			REV__ENST00000339758.7_1_10:69571379-69597705:-|nuORF	REV__ENST00000339758.7_1_10:69571379-69597705:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	520.6503295898438	3	520.967409	1559.8804	-1.5468	-0.00080581	1.9896	0.0010365	0.44284	0.00023071	520.9691884593714	107.86	0.10252	107.89	107.83	107.93	0.036118					4	2	2	0	0	0	0.18238	1	11534	11534		9.2118	6.1858	1	827490	+		51013	25239	34173	34186	57652	57652					0.1228532047337012
RRQRRVRHSVP	11	Unmodified	_RRQRRVRHSVP_					0	0	0		ENST00000216274.9_1_14:24808704-24809147:-|nuORF	ENST00000216274.9_1_14:24808704-24809147:-|nuORF	ENST00000216274.9_1_14:24808704-24809147:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	482.9607238769531	3	482.95902	1445.85523	-0.29426	-0.00014212	2.326	0.0011234	2.0317	0.00098124	482.9600875904296	19.335	0.55227	19.262	19.026	19.579	-0.073704					31	14	3	0	0	0	0.79476	1	406	406		12.433	1.846	1	47743			51014	9131	34174	34187	57653	57653					0.15013588942429124
RRQRTKSSD	9	Unmodified	_RRQRTKSSD_					0	0	0		ENSG00000137656|ENST00000260210|BUD13;nc|ENSG00000137656|Q9BRD0-2|BUD13	ENSG00000137656|ENST00000260210|BUD13	ENSG00000137656|ENST00000260210|BUD13	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3299560546875	2	567.310335	1132.60612	0.48344	0.00027426	-2.7331	-0.0015505	-2.2496	-0.0012762	567.3081075703315	92.336	0.71978	92.558	92.192	92.911	0.22157					27	16	3	0	0	0	0.20789	1	9328	9328		34.173	21.213	1	194470			51015	4221	34175	34188	57654	57654					0.045117811952422926
RRQVIQVVLN	10	Unmodified	_RRQVIQVVLN_					0	0	0		ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.9220275878906	3	408.922689	1223.74624	0.73411	0.0003002	-1.7974	-0.00073501	-1.0633	-0.00043482	408.92190975649805	104.5	3.3645	104.62	103.39	106.76	0.11684					226	83	5	0	0	0	0.85694	1	11106	11106		20.837	3.004	1	4256600			51016	5588	34176	34189	57655	57655					0.14331565199631768
RRQVPTPPPS	10	Unmodified	_RRQVPTPPPS_					0	0	0			REV__ENSG00000177354|ENST00000374144|C10orf71	REV__ENSG00000177354|ENST00000374144|C10orf71	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.8331298828125	2	567.822547	1133.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.77	1	119.68	119.18	120.18	-0.088509								0	0	0	0.45132	1	12941	12941		19.997	0	1		+		51017	22197	34177	34190	57656	57656					0.06907041348745224
RRRAARLRP	9	Unmodified	_RRRAARLRP_					0	0	0		ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	576.3694458007812	2	576.370864	1150.72718	-0.66089	-0.00038092	-2.9166	-0.001681	-3.5774	-0.0020619	576.3690951076389	44.85	2.4577	44.827	43.809	46.266	-0.023079					112	57	3	0	0	0	0.74721	1	3465	3465		37.159	12.956	1	227870			51018	11063	34178	34191	57657	57657					0.1578407341919501
RRRAARLRP	9	Unmodified	_RRRAARLRP_					0	0	0		ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	576.370864	1150.72718	-1.1636	-0.00067065	-1.9859	-0.0011446	-3.1495	-0.0018153	576.369535759686	44.841	1.5815	44.841	44.197	45.779	0	-0.045096	0.00096909	NaN	37.159	90	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186930			51019	11063	34178	34191							0.1578407341919501
RRRAARLRP	9	Unmodified	_RRRAARLRP_					0	0	0		ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	576.370864	1150.72718	-0.69868	-0.0004027	-2.6691	-0.0015384	-3.3678	-0.0019411	576.3691653026062	45.015	1.4393	44.984	44.229	45.668	-0.031067	0.098205	0.00018157	NaN	37.159	86	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	266920			51020	11063	34178	34191							0.1578407341919501
RRRAARLRP	9	Unmodified	_RRRAARLRP_					0	0	0		ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	576.370864	1150.72718	-1.2716	-0.00073294	-2.5769	-0.0014853	-3.8485	-0.0022182	576.3691449346009	44.434	1.8208	44.888	43.887	45.708	0.45401	0.0022135	0.00028785	NaN	37.159	101	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	757650			51021	11063	34178	34191							0.1578407341919501
RRRAARLRP	9	Unmodified	_RRRAARLRP_					0	0	0		ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	576.370864	1150.72718	-1.679	-0.00096773	-2.1783	-0.0012555	-3.8573	-0.0022233	576.3694678211101	44.265	1.8603	45.11	44.093	45.954	0.84438	0.22389	0.0007473	NaN	37.159	95	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	829790			51022	11063	34178	34191							0.1578407341919501
RRRAGPRAGH	10	Unmodified	_RRRAGPRAGH_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.33056640625	2	567.329196	1132.64384	0.77491	0.00043963	0.72616	0.00041197	1.5011	0.0008516	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.88541	1	9140	9140		11.511	1.2458	1	6344600	+		51023	25404	34179	34192	57658	57658					0.08282336971365112
RRRAGSLL	8	Unmodified	_RRRAGSLL_					0	0	0		chr13:43055543-43068930|15|37.13|0.22|7.43|+|2|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|7;chr13:43055543-43065686|15|42.93|0.22|7.63|+|2|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|7	chr13:43055543-43068930|15|37.13|0.22|7.43|+|2|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|7	chr13:43055543-43068930|15|37.13|0.22|7.43|+|2|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.79046630859375	2	464.793592	927.572632	-1.9025	-0.00088428	-4.2508	-0.0019758	-6.1534	-0.00286	464.7914872059108	34.459	1.5924	34.459	34.009	35.601	0					104	42	3	0	0	0	0.87922	1	1829	1829		31.955	0	1	277220			51024	156	34180	34193	57659	57659					0.10594824214001619
RRRALSAFV	9	Unmodified	_RRRALSAFV_					0	0	0		ENST00000262305.8_2_16:475669-476173:+|nuORF	ENST00000262305.8_2_16:475669-476173:+|nuORF	ENST00000262305.8_2_16:475669-476173:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3265991210938	2	538.327799	1074.64105	1.8602	0.0010014	-3.4699	-0.001868	-1.6098	-0.00086659	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.78536	1	12377	12377		29.15	3.6994	1	19391000			51025	9432	34181	34194	57660	57660					0.1067106879381754
RRRARPLP	8	Unmodified	_RRRARPLP_					0	0	0			REV__ENST00000290902.9_1_4:1161287-1161425:-|nuORF	REV__ENST00000290902.9_1_4:1161287-1161425:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.3273620605469	2	511.328134	1020.64171	-0.052165	-2.6674E-05	-1.937	-0.00099047	-1.9892	-0.0010171	511.3270422766062	97.471	2.3305	97.527	97.032	99.363	0.056839					141	53	4	0	0	0	0.82464	1	10319	10319		21.702	0	1	1704400	+		51026	24663	34182	34195	57661	57661					0.13221908233549584
RRRASCFGIA	10	Unmodified	_RRRASCFGIA_					0	0	0			REV__ENST00000413074.1_1_1:222763317-222763545:+|nuORF	REV__ENST00000413074.1_1_1:222763317-222763545:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8090209960938	2	568.808916	1135.60328	0.44183	0.00025132	1.9336	0.0010998	2.3754	0.0013512	568.8102007257518	58.225	0.62403	58.312	57.929	58.553	0.087002					35	25	2	0	0	0	0.85939	1	4927	4927		23.042	3.0457	1	131930	+		51027	26389	34183	34196	57662	57662					0.04090234536738535
RRRASSRV	8	Unmodified	_RRRASSRV_					0	0	0			REV__ENST00000376344.7_1_9:86571402-86571522:-|nuORF	REV__ENST00000376344.7_1_9:86571402-86571522:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.30010986328125	2	494.299573	986.584593	0.79689	0.0003939	1.7866	0.0008831	2.5835	0.001277	494.3003729915352	100.82	1.5238	100.97	100.42	101.94	0.14352					78	36	3	0	0	0	0.87064	1	10594	10594		29.15	0	1	706980	+		51028	25835	34184	34197	57663	57663					0.09076440957187515
RRRCRRRQPWR	11	Unmodified	_RRRCRRRQPWR_					0	0	0		ENST00000265340.11_1_5:134369665-134369908:-|nuORF	ENST00000265340.11_1_5:134369665-134369908:-|nuORF	ENST00000265340.11_1_5:134369665-134369908:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.7850036621094	4	407.236822	1624.91818	-2.0102	-0.00081862	-0.46355	-0.00018878	-2.4737	-0.0010074	407.2359560676954	31.199	0.14037	31.199	31.091	31.232	0					7	4	2	0	0	0	0.1838	1	1468	1468		3.2113	1.6883	1	18671			51029	9502	34185	34198	57664	57664					0.13071831458842098
RRRERRRDSEY	11	Unmodified	_RRRERRRDSEY_					0	0	0			REV__nc|ENSG00000169762|Q6NXT6-2|TAPT1	REV__nc|ENSG00000169762|Q6NXT6-2|TAPT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.9512329101562	3	526.948849	1577.82472	1.2835	0.00067634	0.098089	5.1688E-05	1.3816	0.00072803	526.9490181136337	21.061	0.66212	20.602	20.237	20.9	-0.4591					43	15	4	0	0	0	0.80593	1	729	729		10.104	1.3046	1	115630	+		51030	21602	34186	34199	57665	57665					0.0589176576677346
RRRGPFSSSR	10	Unmodified	_RRRGPFSSSR_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.8373413085938	2	603.334144	1204.65374	4.177	0.0025201	-3.5103	-0.0021179	0.66665	0.00040221	603.3317975621229	106.17	0.67964	106.36	106	106.68	0.18647					61	29	3	0	0	0	0.86218	1	13004	13004		32.812	3.6424	1	131890	+		51031	21394	34187	34200	57666	57666					0.05959480186083965
RRRGRALRLVR	11	Unmodified	_RRRGRALRLVR_					0	0	0		ENST00000542643.6_1_1:21923469-21929393:-|nuORF;ENST00000374763.6_2_1:21923469-21929399:-|nuORF	ENST00000542643.6_1_1:21923469-21929393:-|nuORF	ENST00000542643.6_1_1:21923469-21929393:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.3086242675781	3	470.311393	1407.91235	0.67382	0.0003169	-0.69366	-0.00032624	-0.019841	-9.3315E-06	470.3110345822015	16.507	0.35062	16.483	16.317	16.668	-0.024035					30	14	3	0	0	0	0.80813	1	171	171		9.6461	3.3253	1	202990			51032	10786	34188	34201	57667	57667					0.22471056218796548
RRRGWGLIIL	10	Unmodified	_RRRGWGLIIL_					0	0	0		ENST00000532042.5_1_11:65479717-65480742:+|nuORF	ENST00000532042.5_1_11:65479717-65480742:+|nuORF	ENST00000532042.5_1_11:65479717-65480742:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.9328308105469	3	413.931408	1238.77239	-0.30793	-0.00012746	3.531	0.0014616	3.223	0.0013341	413.9329171146817	43.07	1.6523	43.019	41.913	43.565	-0.050308					85	44	2	0	0	0	0.86587	1	2944	2944		29.17	4.6509	1	357350			51033	13371	34189	34202	57668	57668					0.16255879161758457
RRRHKKRIQLQ	11	Unmodified	_RRRHKKRIQLQ_					0	0	0		chr3:169966858-169976946|63|29.67|0.86|5.11|+|0|SEC62,SEC62|1	chr3:169966858-169976946|63|29.67|0.86|5.11|+|0|SEC62,SEC62|1	chr3:169966858-169976946|63|29.67|0.86|5.11|+|0|SEC62,SEC62|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	507.3254089355469	3	506.99032	1517.94913	-0.53906	-0.0002733	2.6611	0.0013491	2.122	0.0010759	506.9910272803926	15.757	0.18189	15.805	15.675	15.857	0.047803					13	5	4	0	0	0	0.8398	1	83	83		6.6596	3.2509	1	45114			51034	395	34190	34203	57669	57669					0.2108730804472998
RRRHKKRIQLQ	11	Unmodified	_RRRHKKRIQLQ_					0	0	0		chr3:169966858-169976946|63|29.67|0.86|5.11|+|0|SEC62,SEC62|1	chr3:169966858-169976946|63|29.67|0.86|5.11|+|0|SEC62,SEC62|1	chr3:169966858-169976946|63|29.67|0.86|5.11|+|0|SEC62,SEC62|1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	506.99032	1517.94913	0.79298	0.00040203	-0.30136	-0.00015279	0.49162	0.00024925	506.990295310361	15.883	0.18849	15.859	15.751	15.939	-0.024034	0.027446	-0.0029061	NaN	6.6596	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26582			51035	395	34190	34203							0.2108730804472998
RRRIGVTV	8	Unmodified	_RRRIGVTV_					0	0	0		ENST00000543009.5_2_11:71740313-71752882:-|nuORF	ENST00000543009.5_2_11:71740313-71752882:-|nuORF	ENST00000543009.5_2_11:71740313-71752882:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.80426025390625	2	478.809242	955.603932	-2.669	-0.0012779	-4.0656	-0.0019466	-6.7346	-0.0032246	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.84341	1	2608	2608		24.203	2.2429	1	370420			51036	13544	34191	34204	57670	57670					0.12435397248088975
RRRKAAEP	8	Unmodified	_RRRKAAEP_					0	0	0		ENST00000376004.4_1_13:103450841-103451195:-|nuORF	ENST00000376004.4_1_13:103450841-103451195:-|nuORF	ENST00000376004.4_1_13:103450841-103451195:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.300537109375	2	492.296499	982.578445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.235	1	65.273	64.773	65.773	0.037849								0	0	0	0.28057	1	5787	5787		55.504	2.1528	1				51037	10812	34192	34205	57671	57671					0.08645922725645505
RRRKHLKTQS	10	Unmodified	_RRRKHLKTQS_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26800537109375	3	437.268971	1308.78508	-1.7045	-0.00074531	-0.76685	-0.00033532	-2.4713	-0.0010806	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.85086	3	4217	4217;4257;4265		23.378	5.5448	1	3449100	+		51038	29590	34193	34206	57672;57673;57674	57672					0.1430429055399145
RRRKHLKTQS	10	Unmodified	_RRRKHLKTQS_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2678527832031	3	437.268971	1308.78508	-1.6775	-0.00073351	-0.94072	-0.00041135	-2.6182	-0.0011449	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.85086	1	4472	4472		19.263	2.7328	1	2305800	+		51039	29590	34193	34206	57675	57675					0.1430429055399145
RRRKHLKTQS	10	Unmodified	_RRRKHLKTQS_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2677001953125	3	437.268971	1308.78508	-0.097306	-4.2549E-05	-2.5899	-0.0011325	-2.6872	-0.001175	437.26771910027475	53.737	1.8842	53.732	52.971	54.855	-0.0053673					190	57	5	0	0	0	0.86549	1	4721	4721		29.551	12.384	1	2126600	+		51040	29590	34193	34206	57676	57676					0.1430429055399145
RRRKHLKTQS	10	Unmodified	_RRRKHLKTQS_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2676086425781	3	437.268971	1308.78508	-0.68964	-0.00030156	-1.9998	-0.00087444	-2.6894	-0.001176	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.85086	1	4774	4774		19.263	0.73163	1	2651700	+		51041	29590	34193	34206	57677	57677					0.1430429055399145
RRRKHLKTQS	10	Unmodified	_RRRKHLKTQS_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26763916015625	3	437.268971	1308.78508	1.089	0.00047619	-3.8083	-0.0016652	-2.7193	-0.001189	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.84763	3	4774	4703;4774;4786		25.126	7.2928	1	2745300	+		51042	29590	34193	34206	57678;57679;57680	57679					0.1430429055399145
RRRKHLKTQS	10	Unmodified	_RRRKHLKTQS_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26806640625	3	437.268971	1308.78508	-1.5729	-0.00068777	-0.86313	-0.00037742	-2.436	-0.0010652	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.8583	3	4183	4183;4212;4228		23.378	8.5991	1	4358700	+		51043	29590	34193	34206	57681;57682;57683	57681					0.1430429055399145
RRRKHLKTQS	10	Unmodified	_RRRKHLKTQS_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2676086425781	3	437.268971	1308.78508	-1.5693	-0.00068621	-1.1187	-0.00048918	-2.688	-0.0011754	437.2683683670783	53.718	2.085	53.765	52.872	54.957	0.047806					225	71	5	0	0	0	0.86014	2	4354	4354;4363		23.378	2.3457	1	2544700	+		51044	29590	34193	34206	57684;57685	57684					0.1430429055399145
RRRKHLKTQS	10	Unmodified	_RRRKHLKTQS_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2677307128906	3	437.268971	1308.78508	0.31383	0.00013723	-2.9518	-0.0012907	-2.638	-0.0011535	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.86151	2	4354	4354;4486		15.333	1.8252	1	2521600	+		51045	29590	34193	34206	57686;57687	57686					0.1430429055399145
RRRKHLKTQS	10	Unmodified	_RRRKHLKTQS_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.267578125	3	437.268971	1308.78508	-0.53561	-0.00023421	-1.9117	-0.00083594	-2.4473	-0.0010701	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.86151	1	4211	4211		15.333	0	1	4132000	+		51046	29590	34193	34206	57688	57688					0.1430429055399145
RRRKHLKTQS	10	Unmodified	_RRRKHLKTQS_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.267333984375	3	437.268971	1308.78508	-0.59734	-0.0002612	-2.1326	-0.00093253	-2.73	-0.0011937	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.86931	1	4344	4344		14.086	0.57807	1	2564600	+		51047	29590	34193	34206	57689	57689					0.1430429055399145
RRRKHLKTQS	10	Unmodified	_RRRKHLKTQS_					0	0	0			REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	REV__L1PA7_dup12767|chr21:16224330-16230705:+|2.1050360031939923|0.0816360297627274|4.69|63.0|85|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26800537109375	3	437.268971	1308.78508	-0.34848	-0.00015238	-2.3384	-0.0010225	-2.6869	-0.0011749	437.26783788235974	49.466	1.602	49.926	49.459	51.061	0.45983					122	38	5	0	0	0	0.86409	1	4836	4836		25.126	0.85006	1	4698000	+		51048	29590	34193	34206	57690	57690					0.1430429055399145
RRRKIKRQYI	10	Unmodified	_RRRKIKRQYI_					0	0	0		ENST00000320876.10_2_18:2688638-2694582:+|nuORF	ENST00000320876.10_2_18:2688638-2694582:+|nuORF	ENST00000320876.10_2_18:2688638-2694582:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.9709167480469	3	472.972266	1415.89497	-0.95095	-0.00044977	-1.8197	-0.00086067	-2.7707	-0.0013104	472.971385713144	49.546	3.8081	49.55	48.972	52.78	0.0035973					232	95	4	0	0	0	0.888	1	4272	4272		11.097	1.4506	1	1400600			51049	10032	34194	34207	57691	57691					0.2036571589317191
RRRKLPSP	8	Unmodified	_RRRKLPSP_					0	0	0			REV__nc|ENSG00000124782|Q92766-5|RREB1	REV__nc|ENSG00000124782|Q92766-5|RREB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	505.3235168457031	2	505.322517	1008.63048	0.6276	0.00031714	1.8647	0.00094229	2.4923	0.0012594	505.3232988221178	80.75	1.1448	80.893	80.485	81.63	0.14352					67	27	4	0	0	0	0.89043	1	7707	7707		35.618	0	1	642300	+		51050	18611	34195	34208	57692	57692					0.12651086139408108
RRRKPVRRAQR	11	Unmodified	_RRRKPVRRAQR_					0	0	0		ENST00000355379.3_1_1:155231889-155232135:-|nuORF	ENST00000355379.3_1_1:155231889-155232135:-|nuORF	ENST00000355379.3_1_1:155231889-155232135:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.7839050292969	3	493.650297	1477.92906	-1.719	-0.00084857	0.66109	0.00032635	-1.0579	-0.00052222	493.6505370331021	46.543	2.0658	46.539	45.361	47.426	-0.0041618					109	50	3	0	0	0	0.18185	1	3723	3723		11.932	0	1	150920			51051	10351	34196	34209	57693	57693					0.20921557104793465
RRRKREKMKDL	11	Unmodified	_RRRKREKMKDL_					0	0	0		nc|ENSG00000188089|Q3MJ16|PLA2G4E;ENSG00000188089|ENST00000696112|PLA2G4E	nc|ENSG00000188089|Q3MJ16|PLA2G4E	nc|ENSG00000188089|Q3MJ16|PLA2G4E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.9743347167969	3	505.971937	1514.89398	2.9436	0.0014894	1.2121	0.00061331	4.1558	0.0021027	505.97247130566444	107.89	0.59716	107.86	107.34	107.94	-0.031487					54	14	6	0	0	0	0.7896	1	11981	11981		13.508	5.8285	1	180330000			51052	7903	34197	34210	57694	57694					0.15713133461940743
RRRKREKMKDL	11	Unmodified	_RRRKREKMKDL_					0	0	0		nc|ENSG00000188089|Q3MJ16|PLA2G4E;ENSG00000188089|ENST00000696112|PLA2G4E	nc|ENSG00000188089|Q3MJ16|PLA2G4E	nc|ENSG00000188089|Q3MJ16|PLA2G4E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.9738464355469	3	505.971937	1514.89398	2.9404	0.0014878	1.7908	0.00090611	4.7312	0.0023939	505.97287794220534	112.87	7.7849	112.84	112.19	119.97	-0.024811					550	277	2	0	0	0	0.76579	1	12856	12856		18.531	3.8374	1	2261500			51053	7903	34197	34210	57695	57695					0.15713133461940743
RRRKREKMKDL	11	Unmodified	_RRRKREKMKDL_					0	0	0		nc|ENSG00000188089|Q3MJ16|PLA2G4E;ENSG00000188089|ENST00000696112|PLA2G4E	nc|ENSG00000188089|Q3MJ16|PLA2G4E	nc|ENSG00000188089|Q3MJ16|PLA2G4E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	505.9741516113281	3	505.971937	1514.89398	0.80872	0.00040919	3.7229	0.0018837	4.5316	0.0022928	505.9737719124194	107.88	0.78265	107.96	107.26	108.04	0.084412					73	19	5	0	0	0	0.79476	2	11591	11582;11591		12.433	0.50046	1	330640000			51054	7903	34197	34210	57696;57697	57697					0.15713133461940743
RRRKREKMKDL	11	Unmodified	_RRRKREKMKDL_					0	0	0		nc|ENSG00000188089|Q3MJ16|PLA2G4E;ENSG00000188089|ENST00000696112|PLA2G4E	nc|ENSG00000188089|Q3MJ16|PLA2G4E	nc|ENSG00000188089|Q3MJ16|PLA2G4E	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	505.971937	1514.89398	-1.5955	-0.00080729	6.7292	0.0034048	5.1337	0.0025975	506.3095318515149	113.19	0.20975	113.16	113.01	113.22	-0.032333	0.15685	0.0072637	NaN	18.531	9	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2209200			51055	7903	34197	34210							0.15713133461940743
RRRKTILKQHL	11	Unmodified	_RRRKTILKQHL_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.6463623046875	3	483.647671	1447.92118	0.1589	7.6851E-05	-2.8617	-0.001384	-2.7028	-0.0013072	483.6461692650574	46.582	1.726	46.568	46.059	47.785	-0.013821					190	48	5	0	0	0	0.78683	1	3753	3753		14.086	2.6314	1	4073800	+		51056	21882	34198	34211	57698	57698					0.21513985064643748
RRRKTILKQHL	11	Unmodified	_RRRKTILKQHL_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	483.64642333984375	3	483.647671	1447.92118	0.10651	5.1514E-05	-2.5035	-0.0012108	-2.3969	-0.0011593	483.6463288941527	48.079	2.6896	48.07	47.738	50.428	-0.0093269					180	66	5	0	0	0	0.79224	1	3951	3951		12.957	4.5502	1	2577700	+		51057	21882	34198	34211	57699	57699					0.21513985064643748
RRRKTILKQHL	11	Unmodified	_RRRKTILKQHL_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.98077392578125	3	483.647671	1447.92118	-0.78233	-0.00037837	-1.9561	-0.00094607	-2.7385	-0.0013244	483.64658979005526	46.598	1.6296	46.569	46.013	47.642	-0.028782					170	44	5	0	0	0	0.7896	1	3918	3918		13.508	6.8483	1	5108400	+		51058	21882	34198	34211	57700	57700					0.21513985064643748
RRRKTILKQHL	11	Unmodified	_RRRKTILKQHL_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.6461181640625	3	483.647671	1447.92118	-0.83799	-0.00040529	-1.7948	-0.00086806	-2.6328	-0.0012733	483.646679966578	46.367	1.8019	46.382	45.827	47.628	0.015514					182	51	6	0	0	0	0.80813	1	3446	3446		9.6461	2.6274	1	4521700	+		51059	21882	34198	34211	57701	57701					0.21513985064643748
RRRKTILKQHL	11	Unmodified	_RRRKTILKQHL_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.64617919921875	3	483.647671	1447.92118	0.31415	0.00015194	-2.841	-0.001374	-2.5269	-0.0012221	483.64616192950325	48.329	2.4983	48.367	47.592	50.09	0.037735					188	68	4	0	0	0	0.80813	1	3686	3686		9.6461	1.2389	1	2026900	+		51060	21882	34198	34211	57702	57702					0.21513985064643748
RRRKTILKQHL	11	Unmodified	_RRRKTILKQHL_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.9808044433594	3	483.647671	1447.92118	-0.37847	-0.00018305	-3.1781	-0.0015371	-3.5566	-0.0017201	483.6460621723924	44.406	1.6273	44.856	44.239	45.867	0.45025					169	39	6	0	0	0	0.80813	1	4142	4142		9.6461	2.9865	1	32621000	+		51061	21882	34198	34211	57703	57703					0.21513985064643748
RRRKTILKQHL	11	Unmodified	_RRRKTILKQHL_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.6459655761719	3	483.647671	1447.92118	-0.99627	-0.00048184	-1.8756	-0.00090712	-2.8718	-0.001389	483.64666286648185	45.633	1.4844	46.528	45.964	47.448	0.89542					143	36	5	0	0	0	0.80813	1	4249	4249		9.6461	0.43434	1	13898000	+		51062	21882	34198	34211	57704	57704					0.21513985064643748
RRRKWIRYRRY	11	Unmodified	_RRRKWIRYRRY_					0	0	0		nc|ENSG00000205356|Q7Z6L1-3|TECPR1;ENSG00000205356|ENST00000447648|TECPR1;nc|ENSG00000205356|Q7Z6L1-2|TECPR1;nc|ENSG00000205356|Q7Z6L1-4|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.3028869628906	4	428.007833	1708.00223	-0.28103	-0.00012028	2.5218	0.0010794	2.2408	0.00095908	428.2601155554022	64.283	0.19297	64.249	64.106	64.299	-0.034256					9	5	2	0	0	0	0.18404	1	6125	6125		3.6191	3.3068	1	37015			51063	8527	34199	34212	57705	57705					0.17654685827369576
RRRKWSHLV	9	Unmodified	_RRRKWSHLV_					0	0	0			REV__ENST00000378888.9_3_1:1274015-1274675:-|nuORF	REV__ENST00000378888.9_3_1:1274015-1274675:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7674560546875	3	413.25114	1236.73159	-1.8812	-0.00077742	-3.6596	-0.0015123	-5.5409	-0.0022898	413.2495446846231	51.416	0.84891	51.451	50.964	51.813	0.034584					35	25	2	0	0	0	0.20789	1	4059	4059		30.318	4.2543	1	70731	+		51064	25907	34200	34213	57706	57706					0.12269537842098543
RRRLAPRRA	9	Unmodified	_RRRLAPRRA_					0	0	0			REV__ENST00000484302.3_1_17:46673508-46675147:-|nuORF	REV__ENST00000484302.3_1_17:46673508-46675147:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	576.3690795898438	2	576.370864	1150.72718	-1.2206	-0.00070354	-2.6449	-0.0015244	-3.8655	-0.002228	576.3693335725411	41.029	0.99481	41.029	40.647	41.642	0					55	32	2	0	0	0	0.76996	1	2754	2754		33.516	8.0654	1	194140	+		51065	27510	34201	34214	57707	57707					0.15784073419217748
RRRLAPRRA	9	Unmodified	_RRRLAPRRA_					0	0	0			REV__ENST00000484302.3_1_17:46673508-46675147:-|nuORF	REV__ENST00000484302.3_1_17:46673508-46675147:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	576.370864	1150.72718	-1.2206	-0.00070354	-2.6449	-0.0015244	-3.8655	-0.002228	576.3693335725411	41.029	0.99481	41.029	40.647	41.642	0	-0.19333	0.00058824	NaN	33.516	55	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	194140	+		51066	27510	34201	34214							0.15784073419217748
RRRLAPRRA	9	Unmodified	_RRRLAPRRA_					0	0	0			REV__ENST00000484302.3_1_17:46673508-46675147:-|nuORF	REV__ENST00000484302.3_1_17:46673508-46675147:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	576.370864	1150.72718	-0.95493	-0.00055039	-3.0147	-0.0017376	-3.9696	-0.002288	576.3689207411744	41.362	1.2441	41.321	40.856	42.1	-0.04081	0.098952	0.00016187	NaN	33.516	57	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	219690	+		51067	27510	34201	34214							0.15784073419217748
RRRLAPRRA	9	Unmodified	_RRRLAPRRA_					0	0	0			REV__ENST00000484302.3_1_17:46673508-46675147:-|nuORF	REV__ENST00000484302.3_1_17:46673508-46675147:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	576.370864	1150.72718	-1.0254	-0.00059103	-3.0211	-0.0017413	-4.0466	-0.0023323	576.3690206277851	41.392	1.1734	41.398	40.948	42.121	0.0065727	0.17613	0.00015449	NaN	33.516	52	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	163990	+		51068	27510	34201	34214							0.15784073419217748
RRRLAPRRA	9	Unmodified	_RRRLAPRRA_					0	0	0			REV__ENST00000484302.3_1_17:46673508-46675147:-|nuORF	REV__ENST00000484302.3_1_17:46673508-46675147:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	576.370864	1150.72718	0.52233	0.00030106	-5.2959	-0.0030524	-4.7736	-0.0027513	576.3677364917877	41.249	0.53283	41.253	41.006	41.539	0.0043983	0.031154	-0.0024677	NaN	33.516	19	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115460	+		51069	27510	34201	34214							0.15784073419217748
RRRLCIVIKLY	11	Unmodified	_RRRLCIVIKLY_					0	0	0			REV__nc|ENSG00000293504|Q99463|NPY6R	REV__nc|ENSG00000293504|Q99463|NPY6R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.3023681640625	3	478.302624	1431.88604	0.47685	0.00022808	0.25336	0.00012118	0.73021	0.00034926	478.3025280059543	66.964	1.0029	67.09	66.677	67.68	0.12649					108	40	3	0	0	0	0.80813	1	5985	5985		9.6461	0.43434	1	331170	+		51070	30310	34202	34215	57708	57708					0.18737606212471292
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.808837890625	2	513.807034	1025.59952	0.090877	4.6693E-05	3.6708	0.0018861	3.7617	0.0019328	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.81548	2	4231	4231;4277		42.474	14.592	1	1448700			51071	9099	34203	34216	57709;57710	57709					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8082885742188	2	513.807034	1025.59952	-0.47161	-0.00024232	4.2173	0.0021669	3.7457	0.0019245	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.86791	1	4178	4178		28.254	2.8041	1	1552900			51072	9099	34203	34216	57711	57711					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.808837890625	2	513.807034	1025.59952	-0.43911	-0.00022562	4.1663	0.0021407	3.7272	0.0019151	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.86791	1	4334	4334		28.254	2.8041	1	1606900			51073	9099	34203	34216	57712	57712					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8109741210938	2	513.807034	1025.59952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.278	1	57.249	56.749	57.749	-0.02866								0	0	0	0.29199	1	5278	5278		29.842	6.7991	1				51074	9099	34203	34216	57713	57713					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.808837890625	2	513.807034	1025.59952	-0.12671	-6.5103E-05	3.9311	0.0020198	3.8044	0.0019547	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.86791	3	3976	3976;4071;4128		35.201	2.8041	1	1731500			51075	9099	34203	34216	57714;57715;57716	57714					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8087768554688	2	513.807034	1025.59952	-0.18036	-9.2668E-05	3.782	0.0019432	3.6017	0.0018506	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.88915	1	4153	4153		35.201	3.2459	1	1777300			51076	9099	34203	34216	57717	57717					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8084106445312	2	513.807034	1025.59952	-0.38907	-0.00019991	4.2671	0.0021925	3.8781	0.0019926	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.81548	1	3732	3732		20.482	2.1574	1	1358900			51077	9099	34203	34216	57718	57718					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8082885742188	2	513.807034	1025.59952	-0.38547	-0.00019806	4.3324	0.002226	3.9469	0.0020279	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.81548	1	4018	4018		20.482	2.1574	1	1377600			51078	9099	34203	34216	57719	57719					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8087768554688	2	513.807034	1025.59952	0.34333	0.0001764	3.368	0.0017305	3.7114	0.0019069	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.82464	1	3627	3627		21.702	1.2205	1	1306000			51079	9099	34203	34216	57720	57720					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.808837890625	2	513.807034	1025.59952	0.35777	0.00018383	3.4044	0.0017492	3.7622	0.001933	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.89457	1	3917	3917		37.028	10.232	1	1443600			51080	9099	34203	34216	57721	57721					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8076782226562	2	513.807034	1025.59952	-0.30203	-0.00015519	4.1609	0.0021379	3.8589	0.0019827	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.81548	1	4150	4150		20.482	1.1219	1	861580			51081	9099	34203	34216	57722	57722					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.80908203125	2	513.807034	1025.59952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.974	1	50.882	50.382	51.382	-0.091797								0	0	0	0.30004	1	4037	4037		21.702	2.3424	1				51082	9099	34203	34216	57723	57723					0.08773932825192787
RRRLFAAH	8	Unmodified	_RRRLFAAH_					0	0	0		ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	ENST00000204005.13_1_19:41112319-41113358:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8085327148438	2	513.807034	1025.59952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.053	1	50.968	50.468	51.468	-0.084538								0	0	0	0.29452	1	4048	4048		33.516	8.0654	1				51083	9099	34203	34216	57724	57724					0.08773932825192787
RRRLIPAL	8	Unmodified	_RRRLIPAL_					0	0	0		nc|ENSG00000162849|Q2KJY2-2|KIF26B;chr1:245511128-245540767|14|19.0|0.13|7.16|+|ENST00000366518|KIF26B,KIF26B;ENSG00000162849|ENST00000407071|KIF26B	nc|ENSG00000162849|Q2KJY2-2|KIF26B	nc|ENSG00000162849|Q2KJY2-2|KIF26B	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.83544921875	2	497.83526	993.655967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.86	1	112.96	112.46	113.46	0.10638								0	0	0	0.31173	1	12135	12135		9.4706	0	1				51084	46	34204	34217	57725	57725					0.15888560661835527
RRRLLAVPMK	10	Unmodified	_RRRLLAVPMK_					0	0	0			REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9341125488281	3	413.932531	1238.77576	-1.896	-0.00078482	2.4582	0.0010175	0.56219	0.00023271	413.93352675822	43.019	1.5308	43.025	42.029	43.559	0.0057487					104	42	4	0	0	0	0.76096	1	2919	2919		41.427	15.853	1	469080	+		51085	22118	34205	34218	57726	57726					0.1659280594408301
RRRLLLPVAR	10	Unmodified	_RRRLLLPVAR_					0	0	0		ENST00000432329.6_1_2:208394661-208394763:+|nuORF	ENST00000432329.6_1_2:208394661-208394763:+|nuORF	ENST00000432329.6_1_2:208394661-208394763:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2852783203125	3	417.282441	1248.82549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.35	1	68.41	67.91	68.91	0.059288								0	0	0	0.45132	1	6126	6126		15.333	5.687	1				51086	11663	34206	34219	57727	57727					0.21103256944411442
RRRLLSPE	8	Unmodified	_RRRLLSPE_					0	0	0		ENST00000470105.1_1_9:116790870-116812444:+|nuORF;nc|ENSG00000157657|Q5T7W0-2|ZNF618;nc|ENSG00000157657|Q5T7W0-4|ZNF618;ENSG00000157657|ENST00000374126|ZNF618	ENST00000470105.1_1_9:116790870-116812444:+|nuORF	ENST00000470105.1_1_9:116790870-116812444:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.809326171875	2	513.811982	1025.60941	-1.3396	-0.00068828	-4.0211	-0.0020661	-5.3607	-0.0027544	513.8097904108414	55.315	1.3714	55.315	54.869	56.24	0					65	40	2	0	0	0	0.88915	1	4689	4689		35.201	9.7505	1	101120			51087	5444	34207	34220	57728	57728					0.09763076039894258
RRRLPRRRRQN	11	Unmodified	_RRRLPRRRRQN_					0	0	0			REV__nc|ENSG00000059145|Q9H9P5|UNKL	REV__nc|ENSG00000059145|Q9H9P5|UNKL	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	521.9929809570312	3	521.992835	1562.95667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.278	1	56.278	55.778	56.778	0								0	0	0	0.56276	1	4818	4818		6.001	6.001	1		+		51088	16443	34208	34221	57729	57729					0.19771460365018356
RRRLPRRRRQN	11	Unmodified	_RRRLPRRRRQN_					0	0	0			REV__nc|ENSG00000059145|Q9H9P5|UNKL	REV__nc|ENSG00000059145|Q9H9P5|UNKL	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	521.9923095703125	3	521.992835	1562.95667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.299	1	56.299	55.799	56.799	0								0	0	0	0.56276	1	4821	4821		3.2113	1.8894	1		+		51089	16443	34208	34221	57730	57730					0.19771460365018356
RRRLPRRRRQN	11	Unmodified	_RRRLPRRRRQN_					0	0	0			REV__nc|ENSG00000059145|Q9H9P5|UNKL	REV__nc|ENSG00000059145|Q9H9P5|UNKL	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	521.992919921875	3	521.992835	1562.95667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.328	1	56.328	55.828	56.828	0								0	0	0	0.56276	1	4825	4825		6.001	4.7691	1		+		51090	16443	34208	34221	57731	57731					0.19771460365018356
RRRLPRRRRQN	11	Unmodified	_RRRLPRRRRQN_					0	0	0			REV__nc|ENSG00000059145|Q9H9P5|UNKL	REV__nc|ENSG00000059145|Q9H9P5|UNKL	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	521.990966796875	3	521.992835	1562.95667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.051	1	56.082	55.582	56.582	0.030838								0	0	0	0.56276	1	5060	5060		6.001	4.4781	1		+		51091	16443	34208	34221	57732	57732					0.19771460365018356
RRRLRLSRP	9	Unmodified	_RRRLRLSRP_					0	0	0			REV__ENST00000586267.1_1_17:42883048-42906984:-|nuORF	REV__ENST00000586267.1_1_17:42883048-42906984:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9294738769531	3	403.93029	1208.76904	-1.8895	-0.00076324	-0.0082778	-3.3437E-06	-1.8978	-0.00076658	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.7932	1	3482	3482		22.58	7.886	1	2300300	+		51092	27260	34209	34222	57733	57733					0.1730062910773995
RRRLRPNKFRH	11	Unmodified	_RRRLRPNKFRH_					0	0	0		ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	ENSG00000101825|ENST00000217939|MXRA5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2532958984375	3	512.646664	1534.91816	-0.38007	-0.00019484	3.7631	0.0019292	3.3831	0.0017343	512.6479555447677	54.393	0.31423	54.344	54.215	54.529	-0.049271					10	9	2	0	0	0	0.181	1	4505	4505		18.531	9.3192	1	94490			51093	1962	34210	34223	57734	57734					0.17210154730469185
RRRLRRFLFLR	11	Unmodified	_RRRLRRFLFLR_					0	0	0			REV__ENST00000368655.4_1_1:153800818-153895301:-|nuORF	REV__ENST00000368655.4_1_1:153800818-153895301:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.3106689453125	3	530.342693	1588.00625	0.028323	1.5021E-05	1.7924	0.0009506	1.8207	0.00096562	530.3430453231292	27.657	0.96222	27.56	27.049	28.011	-0.096947					35	21	2	0	0	0	0.18276	1	1547	1547		8.4073	5.5555	1	84762	+		51094	25601	34211	34224	57735	57735					0.23576775321089372
RRRLRRGLLGR	11	Unmodified	_RRRLRRGLLGR_					0	0	0			REV__ENST00000559160.1_2_15:59280096-59296221:+|nuORF	REV__ENST00000559160.1_2_15:59280096-59296221:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.307373046875	3	470.311393	1407.91235	0.67382	0.0003169	-0.69366	-0.00032624	-0.019841	-9.3315E-06	470.3110345822015	16.507	0.35062	16.483	16.317	16.668	-0.024035					30	14	3	0	0	0	0.77205	1	159	159		17.167	4.7339	1	202990	+		51095	25329	34212	34225	57736	57736					0.22471056218819285
RRRLRVWRRRR	11	Unmodified	_RRRLRVWRRRR_					0	0	0			REV__nc|ENSG00000135636|O75923-3|DYSF	REV__nc|ENSG00000135636|O75923-3|DYSF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2584228515625	4	417.270087	1665.05124	-1.9229	-0.00080236	1.2279	0.00051238	-0.69493	-0.00028997	417.2700300821915	21	0.096703	21.045	21.001	21.098	0.045401					5	4	2	0	0	0	0.18422	1	535	535		1.3219	0.98142	1	8829.9	+		51096	29867	34213	34226	57737	57737					0.24532018906984376
RRRLRVWRRRR	11	Unmodified	_RRRLRVWRRRR_					0	0	0			REV__nc|ENSG00000135636|O75923-3|DYSF	REV__nc|ENSG00000135636|O75923-3|DYSF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.80865478515625	4	417.270087	1665.05124	0.012695	5.2972E-06	-0.78403	-0.00032715	-0.77134	-0.00032186	417.2697444943614	18.579	1.0084	18.645	18.267	19.275	0.066298					80	50	2	0	0	0	0.18318	1	334	334		6.001	4.5823	1	658780	+		51097	29867	34213	34226	57738	57738					0.24532018906984376
RRRLRVWRRRR	11	Unmodified	_RRRLRVWRRRR_					0	0	0			REV__nc|ENSG00000135636|O75923-3|DYSF	REV__nc|ENSG00000135636|O75923-3|DYSF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	416.80816650390625	4	417.270087	1665.05124	0.48835	0.00020378	-1.4835	-0.00061901	-0.99513	-0.00041524	417.26953183436046	18.61	0.85912	18.586	18.332	19.191	-0.024035					84	38	3	0	0	0	0.18425	1	320	320		0.37141	0.37141	1	489300	+		51098	29867	34213	34226	57739	57739					0.24532018906984376
RRRLRVWRRRR	11	Unmodified	_RRRLRVWRRRR_					0	0	0			REV__nc|ENSG00000135636|O75923-3|DYSF	REV__nc|ENSG00000135636|O75923-3|DYSF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		4	417.270087	1665.05124	-1.9237	-0.00080272	1.337	0.00055788	-0.58678	-0.00024484	417.27062612238893	18.768	0.9067	18.811	18.586	19.492	0.043749	0.13054	0.0027127	NaN	6.001	99	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	359650	+		51099	29867	34213	34226							0.24532018906984376
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.32550048828125	3	498.320672	1491.94019	-1.5275	-0.00076119	3.8613	0.0019242	2.3338	0.001163	498.3224513723807	48.1	1.1756	48.1	47.753	48.929	0					62	31	3	0	0	0	0.78683	1	3684	3684		14.086	1.1285	1	237090	+		51100	20160	34214	34227	57740	57740					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.3241271972656	3	498.320672	1491.94019	-1.5014	-0.00074816	3.8642	0.0019256	2.3628	0.0011774	498.322475094846	50.129	1.802	50.129	48.892	50.694	0					100	42	3	0	0	0	0.77205	4	3992	3974;3992;4002;4030		17.167	7.9549	1	141070	+		51101	20160	34214	34227	57741;57742;57743;57744	57742					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.656982421875	3	498.320672	1491.94019	-1.486	-0.00074053	3.8878	0.0019374	2.4018	0.0011968	498.3225144803097	50.947	1.1661	50.947	50.576	51.742	0					63	30	3	0	0	0	0.81021	3	4078	4078;4090;4128		9.2118	2.8909	1	270970	+		51102	20160	34214	34227	57745;57746;57747	57745					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.322265625	3	498.320672	1491.94019	0.13724	6.839E-05	2.5003	0.001246	2.6376	0.0013144	498.32177331846043	48.036	0.81947	48.026	47.738	48.558	-0.0093269					56	22	3	0	0	0	0.80813	1	3953	3953		9.6461	2.9865	1	255790	+		51103	20160	34214	34227	57748	57748					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.6561584472656	3	498.320672	1491.94019	0.083106	4.1414E-05	2.6193	0.0013052	2.7024	0.0013466	498.32192512329175	49.294	1.871	49.291	48.477	50.348	-0.0030365					99	43	4	0	0	0	0.71803	2	4133	4133;4168		28.577	10.744	1	173550	+		51104	20160	34214	34227	57749;57750	57749					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.6557922363281	3	498.320672	1491.94019	0.041494	2.0677E-05	2.6192	0.0013052	2.6607	0.0013259	498.65628635279654	50.693	1.3057	50.691	50.22	51.526	-0.0020447					79	36	3	0	0	0	0.76579	1	4291	4291		18.531	0.69791	1	233340	+		51105	20160	34214	34227	57751	57751					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.3030700683594	3	498.320672	1491.94019	0.041494	2.0677E-05	2.6192	0.0013052	2.6607	0.0013259	498.65628635279654	50.693	1.3057	50.691	50.22	51.526	-0.0020447					79	36	3	0	0	0	0.18318	1	4385	4385		9.6461	0.43434	1	233340	+		51106	20160	34214	34227	57752	57752					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.3238830566406	3	498.320672	1491.94019	-0.64982	-0.00032382	2.8522	0.0014213	2.2024	0.0010975	498.32204903000945	49.584	1.8955	49.56	48.444	50.34	-0.024033					99	42	3	0	0	0	0.84494	1	4258	4258		6.3209	0.90796	1	215190	+		51107	20160	34214	34227	57753	57753					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.3222961425781	3	498.320672	1491.94019	-0.62261	-0.00031026	3.3055	0.0016472	2.6829	0.0013369	498.65666622308714	50.856	0.89754	50.832	50.34	51.238	-0.02343					63	27	3	0	0	0	0.81021	1	4389	4389		9.2118	2.8909	1	282310	+		51108	20160	34214	34227	57754	57754					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8035583496094	3	498.320672	1491.94019	-0.61011	-0.00030403	2.7107	0.0013508	2.1006	0.0010468	498.3222358580996	51.457	0.41513	51.434	51.282	51.697	-0.02343					15	9	2	0	0	0	0.1745	1	4514	4514		23.378	4.8469	1	48511	+		51109	20160	34214	34227	57755	57755					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.6557312011719	3	498.320672	1491.94019	-1.214	-0.00060498	3.7058	0.0018467	2.4918	0.0012417	498.3223845199751	48.104	0.92968	48.102	47.817	48.747	-0.002449					52	24	3	0	0	0	0.76251	2	3979	3979;3991		19.263	5.7547	1	309840	+		51110	20160	34214	34227	57756;57757	57756					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.32098388671875	3	498.320672	1491.94019	-1.2571	-0.00062643	3.466	0.0017272	2.2089	0.0011007	498.32235621557885	49.598	1.5877	49.602	48.709	50.297	0.0035934					98	35	4	0	0	0	0.78683	2	4171	4171;4224		14.086	2.5923	1	206420	+		51111	20160	34214	34227	57758;57759	57758					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.6555480957031	3	498.320672	1491.94019	-1.3021	-0.00064888	4.0113	0.0019989	2.7092	0.00135	498.6569960452503	50.733	1.4211	50.741	50.213	51.634	0.0077438					99	40	3	0	0	0	0.78683	2	4335	4325;4335		14.086	3.7457	1	283520	+		51112	20160	34214	34227	57760;57761	57761					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.657958984375	3	498.320672	1491.94019	-0.61887	-0.0003084	3.3349	0.0016618	2.716	0.0013534	498.32226194102617	47.891	1.1012	47.913	47.572	48.674	0.02227					70	32	3	0	0	0	0.7896	1	3610	3610		13.508	3.8618	1	262780	+		51113	20160	34214	34227	57762	57762					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.65667724609375	3	498.320672	1491.94019	-0.6158	-0.00030686	2.9055	0.0014479	2.2897	0.001141	498.3219998952032	49.831	1.8637	49.858	48.678	50.542	0.026958					119	49	3	0	0	0	0.78391	4	3898	3835;3844;3870;3898		14.694	8.3872	1	161210	+		51114	20160	34214	34227	57763;57764;57765;57766	57766					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.3248596191406	3	498.320672	1491.94019	-0.61388	-0.00030591	3.3259	0.0016574	2.712	0.0013515	498.32217932763825	50.906	1.1069	50.941	50.404	51.511	0.034584					72	33	3	0	0	0	0.79224	3	4009	4009;4015;4019		12.957	3.7457	1	279180	+		51115	20160	34214	34227	57767;57768;57769	57767					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.32305908203125	3	498.320672	1491.94019	0.32616	0.00016253	1.8507	0.00092225	2.1769	0.0010848	498.32158062820537	48.032	0.86749	48.07	47.766	48.633	0.037731					68	25	3	0	0	0	0.88596	1	3635	3635		3.6191	0.40774	1	260350	+		51116	20160	34214	34227	57770	57770					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.322998046875	3	498.320672	1491.94019	0.34098	0.00016992	1.9378	0.00096567	2.2788	0.0011356	498.3215489235199	49.794	1.8345	49.837	48.67	50.505	0.04224					99	45	3	0	0	0	0.80593	2	3852	3852;3942		10.104	4.1029	1	194850	+		51117	20160	34214	34227	57771;57772	57771					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.3231506347656	3	498.320672	1491.94019	0.35108	0.00017495	2.5233	0.0012574	2.8744	0.0014324	498.32180738572106	50.996	1.0383	51.046	50.409	51.447	0.049896					72	32	3	0	0	0	0.80813	2	4035	4012;4035		9.6461	0.80454	1	332530	+		51118	20160	34214	34227	57773;57774	57774					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.3232421875	3	498.320672	1491.94019	-0.20255	-0.00010094	2.7175	0.0013542	2.515	0.0012533	498.3220322597849	48.029	0.99249	47.936	47.647	48.639	-0.093178					65	25	3	0	0	0	0.81021	1	3638	3638		9.2118	3.513	1	253840	+		51119	20160	34214	34227	57775	57775					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.3215637207031	3	498.320672	1491.94019	-0.26748	-0.00013329	2.4869	0.0012393	2.2194	0.001106	498.3218517146112	49.805	1.7523	49.712	48.767	50.519	-0.093178					89	44	3	0	0	0	0.71207	3	3913	3873;3913;3948		29.551	7.7703	1	158970	+		51120	20160	34214	34227	57776;57777;57778	57777					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.655517578125	3	498.320672	1491.94019	-0.30203	-0.00015051	2.9552	0.0014726	2.6532	0.0013221	498.3219797483675	50.891	1.0872	50.799	50.377	51.464	-0.091793					78	30	4	0	0	0	0.76579	3	4021	4016;4021;4049		18.531	6.0982	1	376330	+		51121	20160	34214	34227	57779;57780;57781	57780					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.79510498046875	3	498.320672	1491.94019	-0.23984	-0.00011952	2.3571	0.0011746	2.1173	0.0010551	498.32181487881763	49.226	0.78492	49.133	48.639	49.424	-0.093178					32	18	2	0	0	0	0.17911	1	3807	3807		18.531	6.0982	1	198010	+		51122	20160	34214	34227	57782	57782					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-2|DRD2	REV__nc|ENSG00000149295|P14416-2|DRD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7953186035156	3	498.320672	1491.94019	-0.92409	-0.00046049	3.2723	0.0016306	2.3482	0.0011701	498.3222572374706	46.356	0.57021	47.279	46.949	47.519	0.92315					23	13	2	0	0	0	0.17911	1	4360	4360		18.531	9.7317	1	731120	+		51123	20160	34214	34227	57783	57783					0.21389521635683195
RRRMKKKKKMM	11	Unmodified	_RRRMKKKKKMM_					0	0	0		ENST00000235372.11_1_1:14105080-14105206:+|nuORF	ENST00000235372.11_1_1:14105080-14105206:+|nuORF	ENST00000235372.11_1_1:14105080-14105206:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.30902099609375	3	507.643999	1519.91017	0.478	0.00024265	1.8243	0.00092607	2.3023	0.0011687	507.64486919780404	16.497	0.1389	16.009	15.913	16.052	-0.48718					4	2	2	0	0	0	0.18304	1	139	139		6.3209	2.7018	1	42145			51124	9233	34215	34228	57784	57784					0.17100800102821268
RRRMKRRRQQL	11	Unmodified	_RRRMKRRRQQL_					0	0	0			REV__ENST00000525722.1_1_11:812627-812858:+|nuORF	REV__ENST00000525722.1_1_11:812627-812858:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.9917602539062	3	528.658576	1582.9539	0.35209	0.00018614	-1.1367	-0.00060092	-0.78459	-0.00041478	528.6579756700202	26.729	1.292	26.554	26.205	27.497	-0.17559					69	28	4	0	0	0	0.84494	1	1480	1480		6.3209	0.31984	1	328910	+		51125	28190	34216	34229	57785	57785					0.18573868915859748
RRRMRRTRRRL	11	Unmodified	_RRRMRRTRRRL_					0	0	0		ENST00000423021.2_1_9:5112335-5112581:+|nuORF	ENST00000423021.2_1_9:5112335-5112581:+|nuORF	ENST00000423021.2_1_9:5112335-5112581:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3390502929688	3	538.337836	1611.99168	0.20294	0.00010925	-1.6707	-0.00089939	-1.4677	-0.00079014	538.3369282392331	16.137	0.38364	15.65	15.484	15.867	-0.48718					16	8	4	0	0	0	0.93527	1	91	91		0.37141	0.059155	1	168730			51126	11494	34217	34230	57786	57786					0.21016379901311666
RRRMRRTRRRL	11	Unmodified	_RRRMRRTRRRL_					0	0	0		ENST00000423021.2_1_9:5112335-5112581:+|nuORF	ENST00000423021.2_1_9:5112335-5112581:+|nuORF	ENST00000423021.2_1_9:5112335-5112581:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3388061523438	3	538.337836	1611.99168	-0.10384	-5.5899E-05	-1.5449	-0.00083169	-1.6488	-0.00088759	538.3369385479186	16.13	0.27285	15.531	15.375	15.648	-0.59873					16	5	4	0	0	0	0.79945	2	99	90;99		11.455	11.114	1	297280			51127	11494	34217	34230	57787;57788	57788					0.21016379901311666
RRRMRRTRRRL	11	Unmodified	_RRRMRRTRRRL_					0	0	0		ENST00000423021.2_1_9:5112335-5112581:+|nuORF	ENST00000423021.2_1_9:5112335-5112581:+|nuORF	ENST00000423021.2_1_9:5112335-5112581:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9294128417969	4	404.005196	1611.99168	-0.9202	-0.00037177	-1.6744	-0.00067646	-2.5946	-0.0010482	404.0042776221165	45.116	0.6113	45.993	45.618	46.23	0.87769					18	14	2	0	0	0	0.18304	1	4171	4171		10.104	9.7325	1	210190			51128	11494	34217	34230	57789	57789					0.21016379901311666
RRRNLRKIQ	9	Unmodified	_RRRNLRKIQ_					0	0	0		ENSG00000147256|ENST00000276211|ARHGAP36;nc|ENSG00000147256|Q6ZRI8-3|ARHGAP36;nc|ENSG00000147256|Q6ZRI8-5|ARHGAP36;nc|ENSG00000147256|Q6ZRI8-2|ARHGAP36;nc|ENSG00000147256|Q6ZRI8-4|ARHGAP36	ENSG00000147256|ENST00000276211|ARHGAP36	ENSG00000147256|ENST00000276211|ARHGAP36	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.93280029296875	3	413.933811	1238.7796	-1.8924	-0.00078334	-0.5912	-0.00024472	-2.4836	-0.0010281	413.93347709098015	44.87	2.8248	44.882	43.566	46.391	0.012058					191	71	4	0	0	0	0.7932	1	3073	3073		24.519	0	1	675440			51129	4893	34218	34231	57790	57790					0.16976611762174798
RRRNSVPQRP	10	Unmodified	_RRRNSVPQRP_					0	0	0		nc|ENSG00000070886|P29322-2|EPHA8	nc|ENSG00000070886|P29322-2|EPHA8	nc|ENSG00000070886|P29322-2|EPHA8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3681030273438	2	633.368518	1264.72248	0.88639	0.00056141	-0.00022076	-1.3982E-07	0.88617	0.00056127	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.8545	1	9671	9671		36.447	3.6962	1	5166300			51130	14774	34219	34232	57791	57791					0.1007114448577795
RRRNSVPQRP	10	Unmodified	_RRRNSVPQRP_					0	0	0		nc|ENSG00000070886|P29322-2|EPHA8	nc|ENSG00000070886|P29322-2|EPHA8	nc|ENSG00000070886|P29322-2|EPHA8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3682861328125	2	633.368518	1264.72248	1.4972	0.00094828	-0.37398	-0.00023686	1.1232	0.00071142	633.3681812370636	95.449	2.3087	95.87	94.551	96.859	0.42051					197	55	4	0	0	0	0.86763	1	11278	11278		26.693	3.1702	1	3612700			51131	14774	34219	34232	57792	57792					0.1007114448577795
RRRPLPPSP	9	Unmodified	_RRRPLPPSP_					0	0	0			REV__ENST00000452622.1_1_7:560084-560396:+|nuORF	REV__ENST00000452622.1_1_7:560084-560396:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3269653320312	2	538.327799	1074.64105	-1.4902	-0.00080221	0.37298	0.00020079	-1.1172	-0.00060142	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12335	12335		24.203	3.7209	1	4041000	+		51132	26900	34220	34233	57793	57793					0.10671068793840277
RRRPPHSPRL	10	Unmodified	_RRRPPHSPRL_					0	0	0			REV__ENSG00000133246|ENST00000423345|PRAM1	REV__ENSG00000133246|ENST00000423345|PRAM1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	636.3715209960938	2	636.381429	1270.7483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.646	1	67.773	67.273	68.273	0.12748								0	0	0	0.45132	1	6056	6056		31.53	3.4483	1		+		51133	19066	34221	34234	57794	57794					0.123760387280754
RRRPQVSL	8	Unmodified	_RRRPQVSL_					0	0	0			REV__ENST00000527249.5_1_11:65769381-65769534:-|nuORF	REV__ENST00000527249.5_1_11:65769381-65769534:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3121643066406	2	506.312149	1010.60975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.784	1	63.907	63.407	64.407	0.12252								0	0	0	0.29631	1	5600	5600		25.45	0	1		+		51134	24913	34222	34235	57795	57795					0.1048649575974423
RRRPRKRRGRK	11	Unmodified	_RRRPRKRRGRK_					0	0	0		ENST00000600059.5_1_19:48988799-49002658:-|nuORF	ENST00000600059.5_1_19:48988799-49002658:-|nuORF	ENST00000600059.5_1_19:48988799-49002658:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.00262451171875	3	508.001442	1520.9825	0.79621	0.00040448	2.7639	0.001404	3.5601	0.0018085	508.0030441605032	15.49	0.23416	15.466	15.385	15.62	-0.024207					10	6	2	0	0	0	0.8498	1	42	42		6.001	2.7897	1	66799			51135	14377	34223	34236	57796	57796					0.24284354607266323
RRRPRRPRVR	10	Unmodified	_RRRPRRPRVR_					0	0	0			REV__ENST00000371873.9_1_1:47799697-47834181:+|nuORF	REV__ENST00000371873.9_1_1:47799697-47834181:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	469.3059387207031	3	468.971371	1403.89228	-1.6686	-0.00078252	0.88972	0.00041725	-0.77888	-0.00036527	468.9716486739128	48.981	2.0478	48.981	48.288	50.336	0					141	48	4	0	0	0	0.89119	1	3839	3839		10.587	4.2659	1	552830	+		51136	25701	34224	34237	57797	57797					0.20649305278834618
RRRPRRPRVR	10	Unmodified	_RRRPRRPRVR_					0	0	0			REV__ENST00000371873.9_1_1:47799697-47834181:+|nuORF	REV__ENST00000371873.9_1_1:47799697-47834181:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.9704895019531	3	468.971371	1403.89228	-0.72768	-0.00034126	-0.32527	-0.00015254	-1.053	-0.0004938	468.971108040395	48.851	1.8477	48.826	48.183	50.03	-0.025112					104	41	4	0	0	0	0.91645	1	4142	4142		6.6596	0.33873	1	717440	+		51137	25701	34224	34237	57798	57798					0.20649305278834618
RRRPRRPRVR	10	Unmodified	_RRRPRRPRVR_					0	0	0			REV__ENST00000371873.9_1_1:47799697-47834181:+|nuORF	REV__ENST00000371873.9_1_1:47799697-47834181:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.97052001953125	3	468.971371	1403.89228	-0.67421	-0.00031619	-0.3092	-0.00014501	-0.98341	-0.00046119	468.97111035910297	48.878	1.755	48.878	48.363	50.118	0.00016785					115	39	4	0	0	0	0.91405	1	4092	4092		7.0187	1.0176	1	756620	+		51138	25701	34224	34237	57799	57799					0.20649305278834618
RRRPRRRRHSW	11	Unmodified	_RRRPRRRRHSW_					0	0	0		ENST00000358344.7_1_5:177631560-177631635:+|nuORF	ENST00000358344.7_1_5:177631560-177631635:+|nuORF	ENST00000358344.7_1_5:177631560-177631635:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.9907836914062	3	540.321063	1617.94136	1.3911	0.00075166	0.055247	2.9851E-05	1.4464	0.00078151	540.6560439905179	105.45	1.7981	105.61	104.38	106.18	0.15583					79	47	3	0	0	0	0.89497	1	12850	12850		3.026	1.6072	1	294080			51139	10408	34225	34238	57800	57800					0.15710593567814612
RRRPRRRRRVN	11	Unmodified	_RRRPRRRRRVN_					0	0	0		ENSG00000185163|ENST00000397333|DDX51	ENSG00000185163|ENST00000397333|DDX51	ENSG00000185163|ENST00000397333|DDX51	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2681274414062	3	526.668463	1576.98356	1.1531	0.00060729	1.1276	0.00059386	2.2807	0.0012012	526.6696522744842	23.369	0.25553	22.795	22.664	22.92	-0.57415					8	5	2	0	0	0	0.1841	1	1043	1043		3.2113	3.2113	1	31152			51140	7685	34226	34239	57801	57801					0.21814568976174087
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.9998779296875	3	532.000101	1592.97847	0.83371	0.00044354	0.33219	0.00017673	1.1659	0.00062026	532.0003617145958	108.9	0.48252	108.98	108.76	109.24	0.078552					26	21	2	0	0	0	0.89215	1	11718	11718		3.2113	1.8894	1	1425700	+		51141	24255	34227	34240	57802	57802					0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	532.000101	1592.97847	-0.54948	-0.00029232	-0.35701	-0.00018993	-0.90648	-0.00048225	532.3334846013717	108.64	0.71008	108.64	108.55	109.26	0	-0.10714	-0.00071597	NaN	3.2113	56	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1276100	+		51142	24255	34227	34240							0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	532.000101	1592.97847	-0.031954	-1.6999E-05	-1.6232	-0.00086354	-1.6551	-0.00088054	532.3327322838016	108.74	1.0351	108.69	108.1	109.14	-0.049324	-0.055976	-0.0027368	NaN	3.2113	59	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1721300	+		51143	24255	34227	34240							0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	532.000101	1592.97847	1.2433	0.00066144	-1.0091	-0.00053685	0.23419	0.00012459	531.999729094368	108.47	0.33324	108.5	108.29	108.63	0.034355	-0.24797	-0.0017567	NaN	3.2113	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	876030	+		51144	24255	34227	34240							0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	532.000101	1592.97847	0.83371	0.00044354	0.33219	0.00017673	1.1659	0.00062026	532.0003617145958	108.9	0.48252	108.98	108.76	109.24	0.078552	0.22887	0.000384	NaN	3.2113	26	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1425700	+		51145	24255	34227	34240							0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	532.000101	1592.97847	-1.5108	-0.00080375	2.7807	0.0014793	1.2699	0.0006756	532.3358715806137	108.91	0.1123	108.93	108.89	109.01	0.020569	0.18221	0.0042919	NaN	3.2113	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	457010	+		51146	24255	34227	34240							0.20570265113542519
RRRPRRRWELR	11	Unmodified	_RRRPRRRWELR_					0	0	0			REV__ENST00000291572.12_1_21:45404383-45404527:+|nuORF	REV__ENST00000291572.12_1_21:45404383-45404527:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3966064453125	3	546.332968	1635.97708	1.2148	0.00066369	-1.6948	-0.00092593	-0.47999	-0.00026223	546.3321149439322	105.52	0.45705	105.68	105.4	105.86	0.15583					22	10	3	0	0	0	0.18422	1	12885	12885		0.31226	0.31226	1	103800	+		51147	24670	34228	34241	57803	57803					0.1845263102482022
RRRPRRRWELR	11	Unmodified	_RRRPRRRWELR_					0	0	0			REV__ENST00000291572.12_1_21:45404383-45404527:+|nuORF	REV__ENST00000291572.12_1_21:45404383-45404527:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3964233398438	3	546.332968	1635.97708	3.7712	0.0020603	-3.5124	-0.001919	0.25877	0.00014137	546.3311582180529	105.47	0.53175	105.65	105.44	105.97	0.18647					21	12	2	0	0	0	0.1841	1	12926	12926		0.31226	0.025824	1	119940	+		51148	24670	34228	34241	57804	57804					0.1845263102482022
RRRPRRRWELR	11	Unmodified	_RRRPRRRWELR_					0	0	0			REV__ENST00000291572.12_1_21:45404383-45404527:+|nuORF	REV__ENST00000291572.12_1_21:45404383-45404527:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	546.332968	1635.97708	0.18707	0.00010221	0.55642	0.00030399	0.7435	0.0004062	546.6676684904979	105.77	0.41922	105.92	105.58	106	0.15925	0.15912	0.0033999	NaN	0.31226	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106020	+		51149	24670	34228	34241							0.1845263102482022
RRRPRRRWELR	11	Unmodified	_RRRPRRRWELR_					0	0	0			REV__ENST00000291572.12_1_21:45404383-45404527:+|nuORF	REV__ENST00000291572.12_1_21:45404383-45404527:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	546.332968	1635.97708	0.84772	0.00046314	-0.50352	-0.00027509	0.3442	0.00018805	546.6665133884559	105.7	0.42295	105.81	105.66	106.08	0.10766	0.040324	0.0016627	NaN	0.31226	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112630	+		51150	24670	34228	34241							0.1845263102482022
RRRQQLARQA	10	Unmodified	_RRRQQLARQA_					0	0	0		ENSG00000196917|ENST00000432564|HCAR1	ENSG00000196917|ENST00000432564|HCAR1	ENSG00000196917|ENST00000432564|HCAR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8824462890625	2	641.881793	1281.74903	1.4722	0.00094496	-0.46059	-0.00029565	1.0116	0.00064931	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.85958	1	11586	11586		15.642	0.77694	1	4511200			51151	8113	34229	34242	57805	57805					0.11942833377133866
RRRQRKAGIRD	11	Unmodified	_RRRQRKAGIRD_					0	0	0			REV__nc|ENSG00000221883|Q8N7S6|ARIH2OS	REV__nc|ENSG00000221883|Q8N7S6|ARIH2OS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.62322998046875	3	471.287025	1410.83924	-0.21499	-0.00010132	1.5128	0.00071298	1.2978	0.00061165	471.28769232966624	22.752	0.75669	22.141	21.782	22.539	-0.6107					51	18	4	0	0	0	0.75121	1	936	936		21.78	2.1535	1	259280	+		51152	30206	34230	34243	57806	57806					0.1502588270554952
RRRQTVERRLR	11	Unmodified	_RRRQTVERRLR_					0	0	0		ENSG00000167895|ENST00000318430|TMC8	ENSG00000167895|ENST00000318430|TMC8	ENSG00000167895|ENST00000318430|TMC8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2681579589844	3	509.313462	1524.91856	0.6183	0.00031491	0.2406	0.00012254	0.8589	0.00043745	509.3133793537234	16.946	0.29172	16.459	16.236	16.528	-0.48718					10	6	2	0	0	0	0.18372	1	204	204		6.3209	0.31984	1	141910			51153	6337	34231	34244	57807	57807					0.17709529659668988
RRRRAAGG	8	Unmodified	_RRRRAAGG_					0	0	0		ENST00000283943.9_1_2:230786650-230786713:-|nuORF	ENST00000283943.9_1_2:230786650-230786713:-|nuORF	ENST00000283943.9_1_2:230786650-230786713:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2745056152344	2	450.273358	898.532164	-0.39172	-0.00017638	3.0629	0.0013792	2.6712	0.0012028	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.86791	1	11220	11220		28.254	1.4582	1	19085000			51154	9641	34232	34245	57808	57808					0.07883902614230465
RRRRAAGT	8	Unmodified	_RRRRAAGT_					0	0	0			REV__ENST00000345057.8_1_16:67189180-67190534:-|nuORF	REV__ENST00000345057.8_1_16:67189180-67190534:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2878723144531	2	472.286466	942.558379	1.4182	0.00066978	1.4985	0.00070774	2.9167	0.0013775	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.87064	1	11526	11526		29.15	1.2673	1	21289000	+		51155	25311	34233	34246	57809	57809					0.08480171785697621
RRRRAPLP	8	Unmodified	_RRRRAPLP_					0	0	0		ENST00000369604.5_1_1:114301878-114302094:-|nuORF	ENST00000369604.5_1_1:114301878-114302094:-|nuORF	ENST00000369604.5_1_1:114301878-114302094:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.3271179199219	2	511.328134	1020.64171	-0.052165	-2.6674E-05	-1.937	-0.00099047	-1.9892	-0.0010171	511.3270422766062	97.471	2.3305	97.527	97.032	99.363	0.056839					141	53	4	0	0	0	0.81724	2	10282	10248;10282		21.702	2.3424	1	1704400			51156	10623	34234	34247	57810;57811	57811					0.13221908233549584
RRRRAPLP	8	Unmodified	_RRRRAPLP_					0	0	0		ENST00000369604.5_1_1:114301878-114302094:-|nuORF	ENST00000369604.5_1_1:114301878-114302094:-|nuORF	ENST00000369604.5_1_1:114301878-114302094:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.326904296875	2	511.328134	1020.64171	0.52337	0.00026762	-2.4966	-0.0012766	-1.9732	-0.0010089	511.3267559398498	97.201	2.4372	97.249	96.783	99.22	0.048157					148	56	4	0	0	0	0.80963	4	10355	10304;10320;10332;10355		21.702	2.3424	1	1880900			51157	10623	34234	34247	57812;57813;57814;57815	57815					0.13221908233549584
RRRRAPLP	8	Unmodified	_RRRRAPLP_					0	0	0		ENST00000369604.5_1_1:114301878-114302094:-|nuORF	ENST00000369604.5_1_1:114301878-114302094:-|nuORF	ENST00000369604.5_1_1:114301878-114302094:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.3277587890625	2	511.328134	1020.64171	1.6453	0.0008413	-3.3994	-0.0017382	-1.7541	-0.0008969	511.3263481165188	96.957	1.7248	97.362	96.844	98.568	0.40498					86	41	3	0	0	0	0.80963	1	11641	11641		15.636	1.8609	1	836720			51158	10623	34234	34247	57816	57816					0.13221908233549584
RRRRCPLQ	8	Unmodified	_RRRRCPLQ_					0	0	0		ENSG00000165966|ENST00000402685|PDZRN4	ENSG00000165966|ENST00000402685|PDZRN4	ENSG00000165966|ENST00000402685|PDZRN4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.9635009765625	2	542.817076	1083.6196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.022	1	61.576	61.076	62.076	0.55386								0	0	0	0.29568	1	6514	6514		35.201	3.2459	1				51159	6143	34235	34248	57817	57817					0.08113360493484834
RRRRCPRAGS	10	Unmodified	_RRRRCPRAGS_					0	0	0		ENST00000374279.3_1_9:114659094-114659565:+|nuORF	ENST00000374279.3_1_9:114659094-114659565:+|nuORF	ENST00000374279.3_1_9:114659094-114659565:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5642395019531	3	405.563501	1213.66867	-0.18903	-7.6663E-05	3.2846	0.0013321	3.0956	0.0012555	405.56470246140424	60.148	1.7799	60.134	59.159	60.939	-0.013729					123	48	3	0	0	0	0.8608	1	5564	5564		25.126	0	1	242840			51160	10772	34236	34249	57818	57818					0.07038648782418022
RRRRCPRAGS	10	Unmodified	_RRRRCPRAGS_					0	0	0		ENST00000374279.3_1_9:114659094-114659565:+|nuORF	ENST00000374279.3_1_9:114659094-114659565:+|nuORF	ENST00000374279.3_1_9:114659094-114659565:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.56500244140625	3	405.563501	1213.66867	-0.93523	-0.0003793	3.9898	0.0016181	3.0545	0.0012388	405.56503343144624	60.15	1.6726	60.15	59.126	60.798	0.00051117					148	54	3	0	0	0	0.85694	1	5188	5188		20.837	0	1	288220			51161	10772	34236	34249	57819	57819					0.07038648782418022
RRRRFKMRRMK	11	Unmodified	_RRRRFKMRRMK_					0	0	0		ENSG00000023171|ENST00000635736|GRAMD1B	ENSG00000023171|ENST00000635736|GRAMD1B	ENSG00000023171|ENST00000635736|GRAMD1B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2599182128906	4	405.996411	1619.95654	1.7638	0.00071608	-0.33032	-0.00013411	1.4334	0.00058197	405.99606823903974	56.651	0.89294	56.684	56.581	57.474	0.033184					63	32	3	0	0	0	0.1842	1	5214	5214		1.523	1.1516	1	232490			51162	854	34237	34250	57820	57820					0.17136001049129845
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.2645874023438	3	531.662203	1591.96478	0.14431	7.6725E-05	-3.5438	-0.0018841	-3.3995	-0.0018074	531.6603826967234	55.229	0.82746	55.203	54.891	55.719	-0.026257					41	21	3	0	0	0	0.18372	1	5056	5056		6.3209	4.7979	1	143840	+		51163	18494	34238	34251	57821	57821					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.2646484375	3	531.662203	1591.96478	-0.040243	-2.1396E-05	-3.2384	-0.0017218	-3.2787	-0.0017432	531.660374812634	53.6	1.0757	53.575	53.201	54.277	-0.02475					74	26	4	0	0	0	0.18318	1	4873	4873		9.6461	4.5038	1	178230	+		51164	18494	34238	34251	57822	57822					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.2637939453125	3	531.662203	1591.96478	0.042815	2.2763E-05	-3.3333	-0.0017722	-3.2905	-0.0017494	531.994689276067	55.181	0.68988	55.209	54.959	55.649	0.027142					30	16	2	0	0	0	0.18372	1	4977	4977		3.4087	0	1	138690	+		51165	18494	34238	34251	57823	57823					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.2650756835938	3	531.662203	1591.96478	0.21726	0.00011551	-3.466	-0.0018427	-3.2488	-0.0017272	531.6603758794099	53.813	1.1104	53.835	53.327	54.438	0.022537					75	31	3	0	0	0	0.18304	1	4806	4806		10.104	4.4051	1	211830	+		51166	18494	34238	34251	57824	57824					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2759399414062	3	531.662203	1591.96478	0.69988	0.0003721	-3.6648	-0.0019484	-2.9649	-0.0015763	531.6600634334005	50.13	0.78367	50.577	50.102	50.885	0.4476					30	18	2	0	0	0	0.1842	1	4927	4927		1.523	1.1825	1	266160	+		51167	18494	34238	34251	57825	57825					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.9948120117188	3	531.662203	1591.96478	0.85979	0.00045712	-4.0484	-0.0021524	-3.1886	-0.0016952	531.6599065982914	50.643	1.8028	51.394	50.261	52.063	0.75174					103	43	3	0	0	0	0.89215	2	5003	5003;5019		3.2113	2.8991	1	546840	+		51168	18494	34238	34251	57826;57827	57826					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.2723999023438	3	531.662203	1591.96478	0.85979	0.00045712	-4.0484	-0.0021524	-3.1886	-0.0016952	531.6599065982914	50.643	1.8028	51.394	50.261	52.063	0.75174					103	43	3	0	0	0	0.18404	1	4912	4912		3.6191	3.3068	1	546840	+		51169	18494	34238	34251	57828	57828					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	531.662203	1591.96478	0.032602	1.7333E-05	-3.0751	-0.0016349	-3.0425	-0.0016176	531.6605950074413	53.663	1.0497	53.657	53.244	54.293	-0.0053711	0.018962	0.00027022	NaN	10.104	69	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	239900	+		51170	18494	34238	34251							0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	531.662203	1591.96478	-0.11531	-6.1305E-05	-3.1926	-0.0016974	-3.3079	-0.0017587	531.6604392217423	53.603	1.4649	53.651	52.929	54.394	0.047802	0.012512	8.2889E-05	NaN	10.104	96	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171110	+		51171	18494	34238	34251							0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	531.662203	1591.96478	-0.11445	-6.0849E-05	-2.7257	-0.0014491	-2.8401	-0.00151	531.6606468566008	55.089	0.86999	55.153	54.818	55.688	0.063725	-5.7781E-05	0.00072169	NaN	6.3209	39	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150960	+		51172	18494	34238	34251							0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	531.662203	1591.96478	0.4223	0.00022452	-3.3387	-0.0017751	-2.9164	-0.0015505	531.6602654651284	55.044	0.74442	55.136	54.898	55.642	0.091167	-0.01732	-0.00025606	NaN	6.3209	40	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147390	+		51173	18494	34238	34251							0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	531.662203	1591.96478	-0.28556	-0.00015182	-3.017	-0.001604	-3.3025	-0.0017558	531.6604402414716	53.484	1.2582	53.422	52.944	54.202	-0.062061	-0.21628	0.00036292	NaN	10.104	72	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	273770	+		51174	18494	34238	34251							0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	531.662203	1591.96478	0.63183	0.00033592	-3.9166	-0.0020823	-3.2848	-0.0017464	531.9944996378287	50.811	1.0294	51.246	50.793	51.822	0.43505	-0.074307	0.000101	NaN	3.2113	54	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	369010	+		51175	18494	34238	34251							0.19247594561784354
RRRRIRRKGAR	11	Unmodified	_RRRRIRRKGAR_					0	0	0		ENST00000430166.5_1_3:14989684-14989858:-|nuORF	ENST00000430166.5_1_3:14989684-14989858:-|nuORF	ENST00000430166.5_1_3:14989684-14989858:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3277893066406	3	494.325925	1479.95595	0.075913	3.7526E-05	3.41	0.0016857	3.4859	0.0017232	494.3275244679942	15.426	0.35091	15.484	15.35	15.7	0.057872					29	11	4	0	0	0	0.85439	1	31	31		5.6988	1.6159	1	424000			51176	11627	34239	34252	57829	57829					0.23516665715942509
RRRRKGKPKG	10	Unmodified	_RRRRKGKPKG_					0	0	0			REV__nc|ENSG00000109685|O96028-4|NSD2	REV__nc|ENSG00000109685|O96028-4|NSD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26629638671875	3	413.605806	1237.79559	0.18194	7.5253E-05	-2.664	-0.0011018	-2.482	-0.0010266	413.60475036580175	39.454	0.57316	39.542	39.396	39.969	0.088375					19	14	2	0	0	0	0.37624	1	2434	2434		20.03	0	1	50689	+		51177	17768	34240	34253	57830	57830					0.1862031799905708
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.6492919921875	3	493.650297	1477.92906	-0.87643	-0.00043265	-0.41632	-0.00020552	-1.2928	-0.00063817	493.64998188310005	44.669	3.6346	44.636	43.623	47.257	-0.033474					240	86	4	0	0	0	0.78391	1	3535	3535		14.694	5.0475	1	495450			51178	9891	34241	34254	57831	57831					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.64886474609375	3	493.650297	1477.92906	-2.0219	-0.0009981	0.44974	0.00022201	-1.5721	-0.00077609	493.6504107120104	44.606	1.8952	44.602	43.855	45.75	-0.0041618					105	44	3	0	0	0	0.84494	1	3445	3445		6.3209	0.31984	1	507660			51179	9891	34241	34254	57832	57832					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.65057373046875	3	493.650297	1477.92906	-0.090194	-4.4524E-05	-1.1467	-0.00056609	-1.2369	-0.00061061	493.64966914482096	44.463	1.6429	44.405	43.685	45.328	-0.058258					115	39	4	0	0	0	0.84494	1	3116	3116		6.3209	2.7018	1	603320			51180	9891	34241	34254	57833	57833					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.6492004394531	3	493.650297	1477.92906	-1.9346	-0.00095502	0.24458	0.00012074	-1.69	-0.00083428	493.6503109233065	42.118	1.0078	42.815	42.456	43.463	0.69754					85	24	4	0	0	0	0.80813	1	3743	3743		9.6461	1.2389	1	1535500			51181	9891	34241	34254	57834	57834					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.9830627441406	3	493.650297	1477.92906	-1.7739	-0.00087568	-0.7977	-0.00039379	-2.5716	-0.0012695	493.6497686671866	43.644	1.4163	44.418	43.54	44.956	0.77379					86	34	3	0	0	0	0.7896	1	3983	3983		13.508	0.55046	1	871110			51182	9891	34241	34254	57835	57835					0.20921557104793465
RRRRKKRSPRP	11	Unmodified	_RRRRKKRSPRP_					0	0	0			REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.65679931640625	3	498.322181	1491.94471	0.083106	4.1414E-05	-0.40778	-0.0002032	-0.32467	-0.00016179	498.32192512329175	49.294	1.871	49.291	48.477	50.348	-0.0030365					99	43	4	0	0	0	0.8498	1	4201	4201		6.001	0	1	173550	+		51183	24713	34242	34255	57836	57836					0.21841843621814405
RRRRKKRSPRP	11	Unmodified	_RRRRKKRSPRP_					0	0	0			REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.65667724609375	3	498.322181	1491.94471	0.041494	2.0677E-05	-0.40782	-0.00020323	-0.36633	-0.00018255	498.65628635279654	50.693	1.3057	50.691	50.22	51.526	-0.0020447					79	36	3	0	0	0	0.85439	1	4303	4303		5.6988	0	1	233340	+		51184	24713	34242	34255	57837	57837					0.21841843621814405
RRRRKLRRPTQ	11	Unmodified	_RRRRKLRRPTQ_					0	0	0			REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2514953613281	3	508.325702	1521.95528	0.094805	4.8192E-05	-2.2075	-0.0011221	-2.1127	-0.0010739	508.3240642257163	45.413	1.2033	46.308	45.718	46.921	0.89542					45	29	2	0	0	0	0.18131	1	4312	4312		12.957	10.269	1	321160	+		51185	25012	34243	34256	57838	57838					0.21517826276249252
RRRRKLRRPTQ	11	Unmodified	_RRRRKLRRPTQ_					0	0	0			REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	508.325702	1521.95528	-1.5019	-0.00076347	0.33533	0.00017046	-1.1666	-0.00059302	508.6602683242052	46.257	0.67715	46.257	45.98	46.658	0	-0.1566	0.0016917	NaN	8.7993	38	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66266	+		51186	25012	34243	34256							0.21517826276249252
RRRRKLRRPTQ	11	Unmodified	_RRRRKLRRPTQ_					0	0	0			REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	508.325702	1521.95528	0.20475	0.00010408	-1.2465	-0.00063362	-1.0417	-0.00052954	508.32458941508474	46.57	0.2987	46.556	46.316	46.614	-0.013821	0.143	-0.0007206	NaN	8.7993	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65228	+		51187	25012	34243	34256							0.21517826276249252
RRRRKLRRPTQ	11	Unmodified	_RRRRKLRRPTQ_					0	0	0			REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	508.325702	1521.95528	-0.6505	-0.00033067	-0.7211	-0.00036656	-1.3716	-0.00069722	508.3251740101329	46.536	0.47768	46.532	46.327	46.805	-0.0041618	0.11876	8.061E-05	NaN	8.7993	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74252	+		51188	25012	34243	34256							0.21517826276249252
RRRRKPPRL	9	Unmodified	_RRRRKPPRL_					0	0	0			REV__ENST00000551269.1_1_12:50037029-50037194:+|nuORF	REV__ENST00000551269.1_1_12:50037029-50037194:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.767333984375	3	412.274168	1233.80067	-0.21354	-8.8038E-05	-1.8652	-0.00076897	-2.0787	-0.00085701	412.2734059025972	39.297	0.30238	39.665	39.427	39.729	0.36797					8	6	2	0	0	0	0.20789	1	3269	3269		18.262	1.5447	1	26014	+		51189	17834	34244	34257	57839	57839					0.19312621861695334
RRRRKQWEKIY	11	Unmodified	_RRRRKQWEKIY_					0	0	0		ENST00000553956.6_1_17:62527116-62533894:+|nuORF	ENST00000553956.6_1_17:62527116-62533894:+|nuORF	ENST00000553956.6_1_17:62527116-62533894:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.6563720703125	3	540.318213	1617.93281	4.036	0.0021807	3.7265	0.0020135	7.7626	0.0041943	540.6547038403598	106.83	1.1664	106.98	106.51	107.68	0.14929					94	46	4	0	0	0	0.79224	2	13050	13044;13050		12.957	4.1582	1	229550			51190	13713	34245	34258	57840;57841	57841					0.1485618208798769
RRRRKQWEKIY	11	Unmodified	_RRRRKQWEKIY_					0	0	0		ENST00000553956.6_1_17:62527116-62533894:+|nuORF	ENST00000553956.6_1_17:62527116-62533894:+|nuORF	ENST00000553956.6_1_17:62527116-62533894:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	540.318213	1617.93281	0.84241	0.00045517	5.8933	0.0031843	6.7357	0.0036394	540.6563386218936	106.92	0.78336	107.01	106.56	107.34	0.091255	0.016374	0.0025006	NaN	12.957	37	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103290			51191	13713	34245	34258							0.1485618208798769
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3080749511719	3	478.974893	1433.90285	-1.6535	-0.00079198	0.76549	0.00036665	-0.888	-0.00042533	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.89421	1	3545	3545		10.104	0.8921	1	252010	+		51192	29697	34246	34259	57842	57842					0.2032528793331494
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.31170654296875	3	478.974893	1433.90285	0.11282	5.404E-05	-0.5615	-0.00026894	-0.44868	-0.0002149	478.9744667412385	47.884	1.3902	47.875	47.036	48.427	-0.0093231					71	41	3	0	0	0	0.89421	1	3917	3917		10.104	3.4443	1	396300	+		51193	29697	34246	34259	57843	57843					0.2032528793331494
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.97552490234375	3	478.974893	1433.90285	-0.022494	-1.0774E-05	-0.58603	-0.00028069	-0.60852	-0.00029147	478.9744999510038	52.877	2.746	52.874	51.525	54.271	-0.0033035					162	72	3	0	0	0	0.91405	1	4584	4584		7.0187	0.69781	1	150480	+		51194	29697	34246	34259	57844	57844					0.2032528793331494
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97552490234375	3	478.974893	1433.90285	-0.66296	-0.00031754	0.26465	0.00012676	-0.39831	-0.00019078	478.9749259001235	50.906	1.1817	50.882	50.384	51.566	-0.02343					53	34	2	0	0	0	0.86931	1	4372	4372		14.086	4.4399	1	143310	+		51195	29697	34246	34259	57845	57845					0.2032528793331494
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3079528808594	3	478.974893	1433.90285	-1.9678	-0.00094254	-0.024169	-1.1576E-05	-1.992	-0.00095411	479.30912300096907	43.377	1.5252	43.377	42.724	44.249	0.00016785					100	36	3	0	0	0	0.89708	1	3364	3364		9.6461	0	1	374940	+		51196	29697	34246	34259	57846	57846					0.2032528793331494
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9745788574219	3	478.974893	1433.90285	-0.90815	-0.00043498	0.11467	5.4925E-05	-0.79348	-0.00038005	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.89119	1	3410	3410		10.587	1.375	1	368580	+		51197	29697	34246	34259	57847	57847					0.2032528793331494
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3081359863281	3	478.974893	1433.90285	0.29105	0.00013941	-1.1493	-0.00055049	-0.85825	-0.00041108	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.91405	1	3399	3399		7.0187	1.3199	1	395190	+		51198	29697	34246	34259	57848	57848					0.2032528793331494
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9754638671875	3	478.974893	1433.90285	0.30578	0.00014646	-0.77287	-0.00037019	-0.46709	-0.00022372	478.97445511920006	47.863	1.3107	47.901	47.243	48.554	0.037731					72	41	3	0	0	0	0.89421	1	3682	3682		10.104	0.45776	1	244030	+		51199	29697	34246	34259	57849	57849					0.2032528793331494
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.974609375	3	478.974893	1433.90285	0.32204	0.00015425	-0.84766	-0.00040601	-0.52562	-0.00025176	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.91645	1	4045	4045		6.6596	0.33873	1	307830	+		51200	29697	34246	34259	57850	57850					0.2032528793331494
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97552490234375	3	478.974893	1433.90285	-0.25402	-0.00012167	-0.15424	-7.3878E-05	-0.40827	-0.00019555	478.9747709878051	47.62	1.4426	47.532	47.242	48.685	-0.087646					53	40	2	0	0	0	0.91405	1	3592	3592		7.0187	1.0176	1	370120	+		51201	29697	34246	34259	57851	57851					0.2032528793331494
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9758605957031	3	478.974893	1433.90285	-0.41434	-0.00019846	-0.12856	-6.1578E-05	-0.5429	-0.00026004	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.888	2	4123	4123;4239		11.097	1.4506	1	341610	+		51202	29697	34246	34259	57852;57853	57852					0.2032528793331494
RRRRLPPRK	9	Unmodified	_RRRRLPPRK_					0	0	0		ENSG00000225614|ENST00000565624|ZNF469	ENSG00000225614|ENST00000565624|ZNF469	ENSG00000225614|ENST00000565624|ZNF469	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.19427490234375	3	412.274168	1233.80067	-1.8269	-0.00075318	0.1722	7.0996E-05	-1.6547	-0.00068219	412.27398929933526	85.483	0.25821	85.642	85.46	85.718	0.15851					8	5	2	0	0	0	0.20789	1	8303	8303		8.6937	0.88917	1	29519			51203	8708	34247	34260	57854	57854					0.19312621861672596
RRRRLPQRQRL	11	Unmodified	_RRRRLPQRQRL_					0	0	0		ENST00000331569.5_1_8:37554703-37555105:+|nuORF	ENST00000331569.5_1_8:37554703-37555105:+|nuORF	ENST00000331569.5_1_8:37554703-37555105:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.3247680664062	3	512.325702	1533.95528	0.093444	4.7874E-05	-0.3911	-0.00020037	-0.29766	-0.0001525	512.3254646131551	16.928	0.34835	16.988	16.814	17.163	0.060606					31	13	3	0	0	0	0.8498	1	196	196		6.001	2.5923	1	200960			51204	10127	34248	34261	57855	57855					0.20965826276233201
RRRRLRLLWAP	11	Unmodified	_RRRRLRLLWAP_					0	0	0		ENST00000381340.7_1_12:26985723-26986077:-|nuORF	ENST00000381340.7_1_12:26985723-26986077:-|nuORF	ENST00000381340.7_1_12:26985723-26986077:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.6571960449219	3	498.319777	1491.9375	0.083107	4.1414E-05	4.4155	0.0022003	4.4986	0.0022418	498.32192512329175	49.294	1.871	49.291	48.477	50.348	-0.0030365					99	43	4	0	0	0	0.81021	1	4211	4211		9.2118	0	1	173550			51205	10953	34249	34262	57856	57856					0.21121111021398065
RRRRLRLLWAP	11	Unmodified	_RRRRLRLLWAP_					0	0	0		ENST00000381340.7_1_12:26985723-26986077:-|nuORF	ENST00000381340.7_1_12:26985723-26986077:-|nuORF	ENST00000381340.7_1_12:26985723-26986077:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.65496826171875	3	498.319777	1491.9375	-0.26748	-0.00013329	4.2831	0.0021344	4.0157	0.0020011	498.3218517146112	49.805	1.7523	49.712	48.767	50.519	-0.093178					89	44	3	0	0	0	0.78683	1	3862	3862		14.086	3.9821	1	158970			51206	10953	34249	34262	57857	57857					0.21121111021398065
RRRRLRRRPRG	11	Unmodified	_RRRRLRRRPRG_					0	0	0		ENSG00000183579|ENST00000544604|ZNRF3	ENSG00000183579|ENST00000544604|ZNRF3	ENSG00000183579|ENST00000544604|ZNRF3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.8253173828125	3	512.333191	1533.97774	0.09351	4.7908E-05	-3.7731	-0.0019331	-3.6796	-0.0018852	512.6653253080374	15.902	0.16056	15.961	15.875	16.035	0.059268					12	5	3	0	0	0	0.18066	1	83	83		19.263	6.3052	1	38006			51207	7542	34250	34263	57858	57858					0.23211470464502781
RRRRLSIIPPV	11	Unmodified	_RRRRLSIIPPV_					0	0	0		ENSG00000250423|ENST00000691062|KIAA1210;nc|ENSG00000250423|Q9ULL0|KIAA1210;chrX:119116664-119123582|19|17.0|0.58|4.87|-|ENST00000402510|KIAA1210,KIAA1210;chrX:119109202-119116496|21|20.14|0.6|5.07|-|ENST00000402510|KIAA1210,KIAA1210;chrX:119108471-119109076|19|32.47|0.49|6.06|-|ENST00000402510|KIAA1210,KIAA1210;chrX:119105147-119108337|22|28.77|0.54|5.73|-|ENST00000402510|KIAA1210,KIAA1210;chrX:119096691-119104992|18|19.11|0.36|5.75|-|ENST00000402510|KIAA1210,KIAA1210;chrX:119089746-119093667|19|19.05|0.87|4.45|-|ENST00000402510|KIAA1210,KIAA1210	ENSG00000250423|ENST00000691062|KIAA1210	ENSG00000250423|ENST00000691062|KIAA1210	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.9666748046875	3	454.965	1361.87317	-1.4336	-0.00065226	4.0752	0.0018541	2.6416	0.0012018	454.9667637640074	40.21	1.0197	40.799	40.26	41.28	0.58915					78	26	4	0	0	0	0.80813	1	3460	3460		9.6461	0.43434	1	11642000			51208	538	34251	34264	57859	57859					0.206709111445889
RRRRLWRWWW	10	Unmodified	_RRRRLWRWWW_					0	0	0		chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.9807739257812	3	552.979755	1655.91744	-0.43903	-0.00024278	3.1443	0.0017387	2.7052	0.0014959	552.9811058363465	109.91	1.6295	109.91	109.54	111.17	0					118	60	3	0	0	0	0.94733	6	11416	11406;11416;11424;11467;11507;11525		2.028	1.4039	1	310920			51209	134	34252	34265	57860;57861;57862;57863;57864;57865	57861					0.1157136008141606
RRRRLWRWWW	10	Unmodified	_RRRRLWRWWW_					0	0	0		chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.9805908203125	3	552.979755	1655.91744	3.3572	0.0018565	-1.1886	-0.00065727	2.1686	0.0011992	552.9788663346167	110.66	1.2901	110.63	110.07	111.36	-0.026314					80	39	3	0	0	0	0.9301	4	12236	12215;12236;12286;12318		4.6126	4.1702	1	394660			51210	134	34252	34265	57866;57867;57868;57869	57867					0.1157136008141606
RRRRLWRWWW	10	Unmodified	_RRRRLWRWWW_					0	0	0		chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.980712890625	3	552.979755	1655.91744	1.2833	0.00070966	0.8265	0.00045704	2.1098	0.0011667	552.9800075788518	110.6	1.1701	110.63	110.1	111.27	0.031738					90	38	3	0	0	0	0.91151	2	12111	12111;12151		7.3997	5.6434	1	532550			51211	134	34252	34265	57870;57871	57870					0.1157136008141606
RRRRLWRWWW	10	Unmodified	_RRRRLWRWWW_					0	0	0		chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.9817504882812	3	552.979755	1655.91744	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.29	1	110.36	109.86	110.86	0.073685								0	0	0	0.45132	1	11854	11854		2.028	0.50498	1				51212	134	34252	34265	57872	57872					0.1157136008141606
RRRRLWRWWW	10	Unmodified	_RRRRLWRWWW_					0	0	0		chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.9803466796875	3	552.979755	1655.91744	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.54	1	110.62	110.12	111.12	0.073685								0	0	0	0.45132	1	11886	11886		4.3388	0.25591	1				51213	134	34252	34265	57873	57873					0.1157136008141606
RRRRLWRWWW	10	Unmodified	_RRRRLWRWWW_					0	0	0		chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.9808959960938	3	552.979755	1655.91744	-1.4425	-0.00079765	3.7547	0.0020763	2.3122	0.0012786	553.316321902742	110.55	0.99976	110.55	109.83	110.83	-0.0074387					58	31	3	0	0	0	0.94733	5	11739	11739;11763;11775;11788;11796		2.028	1.5856	1	522110			51214	134	34252	34265	57874;57875;57876;57877;57878	57874					0.1157136008141606
RRRRMKRRRQQ	11	Unmodified	_RRRRMKRRRQQ_					0	0	0			REV__ENST00000525722.1_1_11:812627-812858:+|nuORF	REV__ENST00000525722.1_1_11:812627-812858:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.9976196289062	3	542.997591	1625.97094	0.003871	2.1019E-06	-1.5224	-0.00082668	-1.5186	-0.00082458	543.3311303724438	17.357	0.31963	16.874	16.672	16.991	-0.48256					15	6	3	0	0	0	0.81021	1	247	247		9.2118	7.793	1	210000	+		51215	28190	34253	34266	57879	57879					0.18299789521643106
RRRRMKRRRQQ	11	Unmodified	_RRRRMKRRRQQ_					0	0	0			REV__ENST00000525722.1_1_11:812627-812858:+|nuORF	REV__ENST00000525722.1_1_11:812627-812858:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.833984375	3	542.997591	1625.97094	0.003871	2.1019E-06	-1.5224	-0.00082668	-1.5186	-0.00082458	543.3311303724438	17.357	0.31963	16.874	16.672	16.991	-0.48256					15	6	3	0	0	0	0.18386	1	263	263		5.6988	4.28	1	210000	+		51216	28190	34253	34266	57880	57880					0.18299789521643106
RRRRMKRRRQQ	11	Unmodified	_RRRRMKRRRQQ_					0	0	0			REV__ENST00000525722.1_1_11:812627-812858:+|nuORF	REV__ENST00000525722.1_1_11:812627-812858:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.9961547851562	3	542.997591	1625.97094	-0.035002	-1.9006E-05	-1.758	-0.00095458	-1.793	-0.00097359	542.996602958137	17.477	0.37431	16.867	16.659	17.034	-0.6107					16	8	3	0	0	0	0.88916	1	263	263		3.4087	3.0373	1	236260	+		51217	28190	34253	34266	57881	57881					0.18299789521643106
RRRRNRTY	8	Unmodified	_RRRRNRTY_					0	0	0			REV__ENST00000481195.5_1_5:133561503-133561806:-|nuORF	REV__ENST00000481195.5_1_5:133561503-133561806:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3425903320312	2	589.342304	1176.67005	-0.40075	-0.00023618	1.4849	0.00087513	1.0842	0.00063895	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.86288	1	8978	8978		26.796	0.10319	1	4112500	+		51218	27435	34254	34267	57882	57882					0.08878606142843637
RRRRNRTY	8	Unmodified	_RRRRNRTY_					0	0	0			REV__ENST00000481195.5_1_5:133561503-133561806:-|nuORF	REV__ENST00000481195.5_1_5:133561503-133561806:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3432006835938	2	589.342304	1176.67005	-0.36759	-0.00021664	1.4741	0.00086876	1.1065	0.00065212	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.89494	1	9463	9463		37.159	4.3467	1	11103000	+		51219	27435	34254	34267	57883	57883					0.08878606142843637
RRRRNRTY	8	Unmodified	_RRRRNRTY_					0	0	0			REV__ENST00000481195.5_1_5:133561503-133561806:-|nuORF	REV__ENST00000481195.5_1_5:133561503-133561806:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3427124023438	2	589.342304	1176.67005	2.472	0.0014569	-1.5118	-0.000891	0.96015	0.00056586	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.88915	1	9942	9942		35.201	0.04869	1	16740000	+		51220	27435	34254	34267	57884	57884					0.08878606142843637
RRRRNRTY	8	Unmodified	_RRRRNRTY_					0	0	0			REV__ENST00000481195.5_1_5:133561503-133561806:-|nuORF	REV__ENST00000481195.5_1_5:133561503-133561806:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3429565429688	2	589.342304	1176.67005	-0.63668	-0.00037522	2.1597	0.0012728	1.523	0.00089756	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.86288	1	11044	11044		26.796	0.10319	1	2236100	+		51221	27435	34254	34267	57885	57885					0.08878606142843637
RRRRNRTY	8	Unmodified	_RRRRNRTY_					0	0	0			REV__ENST00000481195.5_1_5:133561503-133561806:-|nuORF	REV__ENST00000481195.5_1_5:133561503-133561806:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3427734375	2	589.342304	1176.67005	0.15554	9.1664E-05	1.0167	0.00059919	1.1722	0.00069085	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.86288	4	11187	11187;11383;11419;11584		38.806	2.2769	1	10540000	+		51222	27435	34254	34267	57886;57887;57888;57889	57886					0.08878606142843637
RRRRPDRRRPR	11	Unmodified	_RRRRPDRRRPR_					0	0	0			REV__nc|ENSG00000251359|Q96NR7|WWC2-AS2	REV__nc|ENSG00000251359|Q96NR7|WWC2-AS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3209228515625	3	526.324584	1575.95192	-0.037494	-1.9734E-05	1.442	0.00075894	1.4045	0.00073921	526.3252630893874	108.67	1.0705	108.63	108.13	109.2	-0.044502					60	44	2	0	0	0	0.81892	1	11821	11821		8.0344	2.892	1	1648700	+		51223	29024	34255	34268	57890	57890					0.18698576222232077
RRRRPDRRRPR	11	Unmodified	_RRRRPDRRRPR_					0	0	0			REV__nc|ENSG00000251359|Q96NR7|WWC2-AS2	REV__nc|ENSG00000251359|Q96NR7|WWC2-AS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.325439453125	3	526.324584	1575.95192	0.82851	0.00043607	0.30066	0.00015825	1.1292	0.00059431	526.3245568900558	107.88	0.34233	107.96	107.67	108.01	0.084412					27	8	5	0	0	0	0.85873	1	11606	11606		5.4129	2.0042	1	120850000	+		51224	29024	34255	34268	57891	57891					0.18698576222232077
RRRRPRRRVP	10	Unmodified	_RRRRPRRRVP_					0	0	0			REV__ENST00000358344.7_1_5:177631560-177631635:+|nuORF	REV__ENST00000358344.7_1_5:177631560-177631635:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.96990966796875	3	468.971371	1403.89228	-0.67421	-0.00031619	-0.3092	-0.00014501	-0.98341	-0.00046119	468.97111035910297	48.878	1.755	48.878	48.363	50.118	0.00016785					115	39	4	0	0	0	0.91151	1	4056	4056		7.3997	0.38104	1	756620	+		51225	25433	34256	34269	57892	57892					0.20649305278834618
RRRRQRLRLR	10	Unmodified	_RRRRQRLRLR_					0	0	0			REV__ENSG00000124302|ENST00000650847|CHST8	REV__ENSG00000124302|ENST00000650847|CHST8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.65570068359375	3	489.322292	1464.94505	-1.9764	-0.00096708	-3.4199	-0.0016734	-5.3962	-0.0026405	489.65544335255646	17.157	0.41713	17.157	16.95	17.367	0					39	19	3	0	0	0	0.91151	1	192	192		7.3997	1.3987	1	52156	+		51226	18579	34257	34270	57893	57893					0.2311726334166906
RRRRQRLRLRT	11	Unmodified	_RRRRQRLRLRT_					0	0	0			REV__ENSG00000124302|ENST00000650847|CHST8	REV__ENSG00000124302|ENST00000650847|CHST8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.8477783203125	3	523.004852	1565.99273	0.84498	0.00044193	4.2028	0.0021981	5.0478	0.00264	523.0074434774217	17.996	0.86292	17.972	17.469	18.332	-0.024033					78	44	2	0	0	0	0.1841	1	257	257		1.3219	0.98142	1	185710	+		51227	18579	34258	34271	57894	57894					0.23236917541862567
RRRRQRLRLRT	11	Unmodified	_RRRRQRLRLRT_					0	0	0			REV__ENSG00000124302|ENST00000650847|CHST8	REV__ENSG00000124302|ENST00000650847|CHST8	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	523.004852	1565.99273	-0.30532	-0.00015968	2.2423	0.0011728	1.937	0.0010131	523.3395434852861	17.685	0.29367	17.73	17.621	17.915	0.044737	-0.12496	-0.0028987	NaN	1.3219	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68624	+		51228	18579	34258	34271							0.23236917541862567
RRRRQRLRLRT	11	Unmodified	_RRRRQRLRLRT_					0	0	0			REV__ENSG00000124302|ENST00000650847|CHST8	REV__ENSG00000124302|ENST00000650847|CHST8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	523.004852	1565.99273	0.29929	0.00015653	3.7793	0.0019766	4.0786	0.0021331	523.3409484129194	18.443	0.26794	17.821	17.676	17.944	-0.62141	-0.034019	-0.00048722	NaN	1.3219	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28924	+		51229	18579	34258	34271							0.23236917541862567
RRRRRERRRRK	11	Unmodified	_RRRRRERRRRK_					0	0	0			REV__ENST00000444772.3_1_10:21805118-21806168:-|nuORF	REV__ENST00000444772.3_1_10:21805118-21806168:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3403930664062	3	561.02665	1680.05812	-1.1623	-0.0006521	-2.0929	-0.0011742	-3.2552	-0.0018263	561.3600127808194	102.42	0.27453	102.44	102.36	102.64	0.01989					9	6	2	0	0	0	0.18238	1	10986	10986		13.508	8.3656	1	265970	+		51230	26791	34259	34272	57895	57895					0.24529331787539377
RRRRREVRVTL	11	Unmodified	_RRRRREVRVTL_					0	0	0		ENST00000377044.8_2_9:74383426-74383705:-|nuORF	ENST00000377044.8_2_9:74383426-74383705:-|nuORF	ENST00000377044.8_2_9:74383426-74383705:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	499.98382568359375	3	499.650075	1495.92839	0.081019	4.0481E-05	-0.14741	-7.3654E-05	-0.066393	-3.3173E-05	499.6500935097008	16.061	0.23795	16.12	16.017	16.255	0.059269					25	10	3	0	0	0	0.81021	1	104	104		9.2118	3.2108	1	135090			51231	10825	34260	34273	57896	57896					0.20026717665064098
RRRRRLDDEWY	11	Unmodified	_RRRRRLDDEWY_					0	0	0			REV__nc|ENSG00000198589|P50851-2|LRBA;REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000198589|P50851-2|LRBA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.34814453125	3	540.953711	1619.8393	0.17668	9.5578E-05	-0.6517	-0.00035254	-0.47502	-0.00025696	540.9530025682035	41.219	0.99993	41.174	41.042	42.042	-0.045467					39	27	2	0	0	0	0.1842	1	2728	2728		0.37141	0	1	273970	+		51232	23342;21863	34261	34274	57897	57897					0.05417837914910706
RRRRRPPK	8	Unmodified	_RRRRRPPK_					0	0	0			REV__ENST00000254998.2_1_20:23331374-23334728:+|nuORF	REV__ENST00000254998.2_1_20:23331374-23334728:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	561.3648071289062	2	561.365582	1120.71661	-0.54951	-0.00030848	-2.6727	-0.0015004	-3.2222	-0.0018089	561.3639017095335	46.054	1.012	46.025	45.497	46.509	-0.028782					47	23	3	0	0	0	0.80706	1	3761	3761		19.36	0	1	192690	+		51233	24315	34262	34275	57898	57898					0.161080907647829
RRRRRPPK	8	Unmodified	_RRRRRPPK_					0	0	0			REV__ENST00000254998.2_1_20:23331374-23334728:+|nuORF	REV__ENST00000254998.2_1_20:23331374-23334728:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.3638305664062	2	561.365582	1120.71661	0.36083	0.00020256	-3.9696	-0.0022284	-3.6088	-0.0020259	561.3631992343464	46.11	1.1029	46.106	45.577	46.68	-0.0041618					45	26	2	0	0	0	0.84341	1	3733	3733		24.203	3.7209	1	163920	+		51234	24315	34262	34275	57899	57899					0.161080907647829
RRRRRPPK	8	Unmodified	_RRRRRPPK_					0	0	0			REV__ENST00000254998.2_1_20:23331374-23334728:+|nuORF	REV__ENST00000254998.2_1_20:23331374-23334728:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3616333007812	2	561.365582	1120.71661	-0.061786	-3.4685E-05	-4.1104	-0.0023074	-4.1722	-0.0023421	561.3631099932169	44.376	1.0511	44.826	44.16	45.211	0.45024					79	25	4	0	0	0	0.85277	1	4016	4016		25.45	5.4534	1	3514300	+		51235	24315	34262	34275	57900	57900					0.161080907647829
RRRRRPWAR	9	Unmodified	_RRRRRPWAR_					0	0	0			REV__ENST00000262809.8_1_19:18572542-18576616:-|nuORF	REV__ENST00000262809.8_1_19:18572542-18576616:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2657165527344	3	437.269417	1308.78642	-1.6775	-0.00073351	-1.9602	-0.00085715	-3.6377	-0.0015907	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.7932	1	4642	4642		17.468	0	1	2305800	+		51236	18282	34263	34276	57901	57901					0.14437969433402031
RRRRRRGPK	9	Unmodified	_RRRRRRGPK_					0	0	0		ENSG00000248767|ENST00000506382|FOXL3	ENSG00000248767|ENST00000506382|FOXL3	ENSG00000248767|ENST00000506382|FOXL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2676086425781	3	413.269417	1236.78642	0.1219	5.0377E-05	-3.476	-0.0014365	-3.3541	-0.0013861	413.2672502915767	40.321	1.5114	40.29	39.321	40.833	-0.030987					67	39	3	0	0	0	0.78124	2	2848	2825;2848		30.318	4.7437	1	243080			51237	8834	34264	34277	57902;57903	57903					0.17749969433407387
RRRRRRKGP	9	Unmodified	_RRRRRRKGP_					0	0	0			REV__ENST00000370010.6_1_6:76311739-76312006:+|nuORF	REV__ENST00000370010.6_1_6:76311739-76312006:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2674865722656	3	413.269417	1236.78642	0.1219	5.0377E-05	-3.476	-0.0014365	-3.3541	-0.0013861	413.2672502915767	40.321	1.5114	40.29	39.321	40.833	-0.030987					67	39	3	0	0	0	0.7932	3	2749	2749;2763;2837		19.997	2.83	1	243080	+		51238	25639	34265	34278	57904;57905;57906	57904					0.17749969433407387
RRRRRRKGP	9	Unmodified	_RRRRRRKGP_					0	0	0			REV__ENST00000370010.6_1_6:76311739-76312006:+|nuORF	REV__ENST00000370010.6_1_6:76311739-76312006:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.26678466796875	3	413.269417	1236.78642	0.21308	8.806E-05	-3.1286	-0.001293	-2.9155	-0.0012049	413.2670936743631	41.866	2.062	41.835	40.73	42.792	-0.030991					122	53	4	0	0	0	0.7932	1	3176	3176		19.997	3.2794	1	252870	+		51239	25639	34265	34278	57907	57907					0.17749969433407387
RRRRRRQQFDS	11	Unmodified	_RRRRRRQQFDS_					0	0	0			REV__ENSG00000113593|ENST00000261308|PPWD1	REV__ENSG00000113593|ENST00000261308|PPWD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.3106689453125	3	520.9612	1559.86177	-0.7936	-0.00041344	0.88852	0.00046289	0.09492	4.945E-05	520.9612743414104	47.525	0.2245	48.448	48.317	48.542	0.92315					7	5	2	0	0	0	0.18343	1	4543	4543		5.4129	3.9942	1	203340	+		51240	18000	34266	34279	57908	57908					0.10423482103146853
RRRRRRRGRHM	11	Unmodified	_RRRRRRRGRHM_					0	0	0		ENST00000288502.8_2_9:117373626-117379440:+|nuORF	ENST00000288502.8_2_9:117373626-117379440:+|nuORF	ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3179321289062	3	531.654048	1591.94031	4.0608	0.002159	0.92219	0.00049028	4.983	0.0026492	531.6544730597839	105.98	0.51363	106.17	105.82	106.34	0.18648					19	16	2	0	0	0	0.18372	1	12951	12951		3.4087	0	1	143300			51241	9664	34267	34280	57909	57909					0.1680205592724633
RRRRRRRRGRH	11	Unmodified	_RRRRRRRRGRH_					0	0	0		ENST00000288502.8_2_9:117373626-117379440:+|nuORF	ENST00000288502.8_2_9:117373626-117379440:+|nuORF	ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2481689453125	4	405.257511	1617.00094	-1.8108	-0.00073383	-1.7918	-0.00072613	-3.6025	-0.00146	405.25720091683	89.763	0.17352	89.976	89.91	90.084	0.21271					5	3	2	0	0	0	0.1842	1	8972	8972		0.37141	0.37141	1	30060			51242	9664	34268	34281	57910	57910					0.2171190930184821
RRRRRRRRGRH	11	Unmodified	_RRRRRRRRGRH_					0	0	0		ENST00000288502.8_2_9:117373626-117379440:+|nuORF	ENST00000288502.8_2_9:117373626-117379440:+|nuORF	ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.565185546875	4	405.257511	1617.00094	-1.8664	-0.00075639	-2.7626	-0.0011196	-4.6291	-0.001876	405.25617873481696	59.754	0.70618	59.848	59.359	60.065	0.094063					32	19	3	0	0	0	0.18372	1	5095	5095		3.4087	3.4087	1	86271			51243	9664	34268	34281	57911	57911					0.2171190930184821
RRRRRRRRHSA	11	Unmodified	_RRRRRRRRHSA_					0	0	0		ENST00000356978.8_1_14:90863393-90866410:+|nuORF;ENST00000447653.7_1_14:90863393-90865345:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	521.9913330078125	3	521.656445	1561.94751	-1.2934	-0.0006747	2.4482	0.0012771	1.1548	0.00060242	521.6576101839959	55.646	1.2053	55.646	55.208	56.414	0					123	38	5	0	0	0	0.84494	1	4745	4745		6.3209	1.1785	1	828200			51244	10376	34269	34282	57912	57912					0.18901111799345927
RRRRRRRRHSA	11	Unmodified	_RRRRRRRRHSA_					0	0	0		ENST00000356978.8_1_14:90863393-90866410:+|nuORF;ENST00000447653.7_1_14:90863393-90865345:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	521.6573486328125	3	521.656445	1561.94751	0.0018454	9.6266E-07	1.4027	0.00073174	1.4046	0.0007327	521.6570438345822	55.201	1.4309	55.194	54.756	56.187	-0.0077057					142	39	5	0	0	0	0.7896	4	4918	4895;4918;4930;4962		13.508	5.1007	1	1446100			51245	10376	34269	34282	57913;57914;57915;57916	57914					0.18901111799345927
RRRRRRRRHSA	11	Unmodified	_RRRRRRRRHSA_					0	0	0		ENST00000356978.8_1_14:90863393-90866410:+|nuORF;ENST00000447653.7_1_14:90863393-90865345:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	521.991455078125	3	521.656445	1561.94751	-0.024988	-1.3035E-05	1.0781	0.0005624	1.0531	0.00054936	521.9913051099392	55.372	1.2186	55.345	54.89	56.109	-0.027279					135	32	5	0	0	0	0.81021	5	5036	5012;5024;5036;5072;5129		9.2118	3.513	1	1514200			51246	10376	34269	34282	57917;57918;57919;57920;57921	57919					0.18901111799345927
RRRRRRRRHSA	11	Unmodified	_RRRRRRRRHSA_					0	0	0		ENST00000356978.8_1_14:90863393-90866410:+|nuORF;ENST00000447653.7_1_14:90863393-90865345:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	521.991455078125	3	521.656445	1561.94751	0.011985	6.2519E-06	0.95178	0.0004965	0.96376	0.00050275	521.6568251732957	55.332	1.3019	55.36	54.888	56.19	0.027672					121	33	5	0	0	0	0.84494	2	4926	4926;4950		6.3209	0.6221	1	1506400			51247	10376	34269	34282	57922;57923	57922					0.18901111799345927
RRRRRRRRHSA	11	Unmodified	_RRRRRRRRHSA_					0	0	0		ENST00000356978.8_1_14:90863393-90866410:+|nuORF;ENST00000447653.7_1_14:90863393-90865345:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	521.6578369140625	3	521.656445	1561.94751	-0.25952	-0.00013538	1.5966	0.00083287	1.3371	0.00069749	521.6571947989914	55.231	1.5244	55.294	54.783	56.307	0.063725					161	52	4	0	0	0	0.84494	1	4584	4584		6.3209	0.6221	1	1935400			51248	10376	34269	34282	57924	57924					0.18901111799345927
RRRRRRRRHSA	11	Unmodified	_RRRRRRRRHSA_					0	0	0		ENST00000356978.8_1_14:90863393-90866410:+|nuORF;ENST00000447653.7_1_14:90863393-90865345:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	521.657470703125	3	521.656445	1561.94751	0.41338	0.00021564	0.82008	0.0004278	1.2335	0.00064344	521.9911888530377	55.139	1.4097	55.23	54.807	56.216	0.091167					167	45	5	0	0	0	0.80813	2	4601	4601;4612		9.6461	2.7983	1	1954200			51249	10376	34269	34282	57925;57926	57925					0.18901111799345927
RRRRRRRRHSA	11	Unmodified	_RRRRRRRRHSA_					0	0	0		ENST00000356978.8_1_14:90863393-90866410:+|nuORF;ENST00000447653.7_1_14:90863393-90865345:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.6573486328125	3	521.656445	1561.94751	0.37306	0.00019461	0.5425	0.000283	0.91556	0.00047761	521.656656425167	52.663	1.4499	53.086	52.596	54.046	0.42348					108	34	5	0	0	0	0.7896	1	5286	5286		13.508	7.8092	1	2294600			51250	10376	34269	34282	57927	57927					0.18901111799345927
RRRRRRRRHSA	11	Unmodified	_RRRRRRRRHSA_					0	0	0		ENST00000356978.8_1_14:90863393-90866410:+|nuORF;ENST00000447653.7_1_14:90863393-90865345:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.9917602539062	3	521.656445	1561.94751	0.10296	5.3708E-05	1.0124	0.00052814	1.1154	0.00058185	521.6568980365676	52.326	1.6503	52.993	52.596	54.247	0.66729					114	39	4	0	0	0	0.81021	1	5310	5310		9.2118	2.8909	1	2604100			51251	10376	34269	34282	57928	57928					0.18901111799345927
RRRRRRRRRRE	11	Unmodified	_RRRRRRRRRRE_					0	0	0		ENST00000377044.8_2_9:74383426-74383705:-|nuORF;ENST00000083182.7_1_17:58603276-58603570:-|nuORF	ENST00000377044.8_2_9:74383426-74383705:-|nuORF	ENST00000377044.8_2_9:74383426-74383705:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	427.302734375	4	428.023343	1708.06427	1.1121	0.000476	2.4286	0.0010395	3.5407	0.0015155	428.2748713567279	65.064	0.15064	65.091	65.018	65.169	0.027138					6	4	2	0	0	0	0.1842	1	6149	6149		1.523	1.1825	1	61495			51252	10825	34270	34283	57929	57929					0.2385585001909476
RRRRRRRRRRH	11	Unmodified	_RRRRRRRRRRH_					0	0	0		ENST00000337565.9_1_2:111878510-111881339:+|nuORF	ENST00000337565.9_1_2:111878510-111881339:+|nuORF	ENST00000337565.9_1_2:111878510-111881339:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.23583984375	4	430.027423	1716.08059	-0.97306	-0.00041844	1.0283	0.00044219	0.055214	2.3743E-05	430.0289952665995	63.432	0.54681	63.455	63.235	63.782	0.022984					37	25	2	0	0	0	0.18318	1	5554	5554		3.2113	0	1	160690			51253	10191	34271	34284	57930	57930					0.25118975975829017
RRRRRRTFHIW	11	Unmodified	_RRRRRRTFHIW_					0	0	0		ENST00000317613.10_1_9:116303752-116304061:+|nuORF	ENST00000317613.10_1_9:116303752-116304061:+|nuORF	ENST00000317613.10_1_9:116303752-116304061:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	410.8980407714844	4	410.746179	1638.95561	1.4297	0.00058725	-2.2275	-0.00091495	-0.79782	-0.0003277	410.745260644792	17.855	0.98644	17.373	16.851	17.838	-0.48256					50	21	5	0	0	0	0.18425	1	285	285		0.37141	0.03091	1	406930			51254	9995	34272	34285	57931	57931					0.16169245996115933
RRRRRSRWLRH	11	Unmodified	_RRRRRSRWLRH_					0	0	0			REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.8250122070312	3	545.664829	1633.97266	-0.34104	-0.0001861	-2.4403	-0.0013316	-2.7813	-0.0015177	545.6632195839868	98.569	0.17783	98.619	98.527	98.705	0.04982					5	3	2	0	0	0	0.1841	1	10435	10435		3.2113	3.2113	1	31701	+		51255	25996	34273	34286	57932	57932					0.18103166601895282
RRRRRVHRYEE	11	Unmodified	_RRRRRVHRYEE_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3046264648438	3	538.304967	1611.89307	-0.51611	-0.00027783	1.7828	0.00095968	1.2667	0.00068186	538.6402087951344	109.81	1.5286	109.81	109.6	111.13	0					119	56	3	0	0	0	0.88916	1	11437	11437		3.4087	0	1	318350			51256	2693	34274	34287	57933	57933					0.1116005513727032
RRRRRVHRYEE	11	Unmodified	_RRRRRVHRYEE_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3058471679688	3	538.304967	1611.89307	3.5626	0.0019178	-2.472	-0.0013307	1.0906	0.00058709	538.3036154864011	110.09	1.3352	110.06	109.77	111.11	-0.027641					122	44	4	0	0	0	0.80593	3	12193	12193;12220;12243		10.104	4.691	1	461650			51257	2693	34274	34287	57934;57935;57936	57934					0.1116005513727032
RRRRRVHRYEE	11	Unmodified	_RRRRRVHRYEE_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3071899414062	3	538.304967	1611.89307	0.84006	0.00045221	-0.013324	-7.1722E-06	0.82674	0.00044504	538.3048488813716	110.52	0.8345	110.6	110.08	110.92	0.073685					49	23	3	0	0	0	0.88916	1	11906	11906		3.4087	0	1	329000			51258	2693	34274	34287	57937	57937					0.1116005513727032
RRRRRVHRYEE	11	Unmodified	_RRRRRVHRYEE_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.6384887695312	3	538.304967	1611.89307	5.1631	0.0027793	-4.0982	-0.0022061	1.0649	0.00057324	538.3026802325604	110.18	0.55859	110.25	110.05	110.61	0.067993					28	18	2	0	0	0	0.89215	1	13404	13404		3.2113	1.6883	1	463850			51259	2693	34274	34287	57938	57938					0.1116005513727032
RRRRSRRMWGL	11	Unmodified	_RRRRSRRMWGL_					0	0	0			REV__ENST00000326786.4_1_1:157106130-157108182:-|nuORF	REV__ENST00000326786.4_1_1:157106130-157108182:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.634033203125	3	510.632138	1528.87458	1.9809	0.0010115	3.0772	0.0015713	5.0582	0.0025829	510.63303476762127	104.3	2.045	104.49	103.76	105.81	0.18887					109	51	3	0	0	0	0.7896	1	12756	12756		13.508	2.9211	1	329880	+		51260	25080	34275	34288	57939	57939					0.13130221961682764
RRRRSRVPI	9	Unmodified	_RRRRSRVPI_					0	0	0		ENST00000458412.1_2_15:44092902-44093782:+|nuORF	ENST00000458412.1_2_15:44092902-44093782:+|nuORF	ENST00000458412.1_2_15:44092902-44093782:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3803100585938	2	598.383971	1194.75339	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.135	1	44.111	43.611	44.611	-0.023689								0	0	0	0.32469	1	3406	3406		21.96	1.013	1				51261	11989	34276	34289	57940	57940					0.16380342590696273
RRRRTAAPSGS	11	Unmodified	_RRRRTAAPSGS_					0	0	0		ENSG00000277535|ENST00000620151|CT47C1	ENSG00000277535|ENST00000620151|CT47C1	ENSG00000277535|ENST00000620151|CT47C1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.565185546875	3	405.565676	1213.6752	-1.8662	-0.00075687	-0.45566	-0.0001848	-2.3219	-0.00094167	405.5653987385133	59.885	1.7634	59.979	59.006	60.769	0.094059					140	62	3	0	0	0	0.75121	1	5095	5095		21.78	0.38517	1	349460			51262	9023	34277	34290	57941	57941					0.0769086521479494
RRRRVVLLPV	10	Unmodified	_RRRRVVLLPV_					0	0	0			REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	632.4292602539062	2	632.427848	1262.84114	0.9319	0.00058936	2.3385	0.0014789	3.2704	0.0020683	632.4290216403841	108.39	0.63701	108.47	108.17	108.81	0.084404					45	23	3	0	0	0	0.88541	1	11641	11641		11.511	0.64546	1	3467900	+		51263	25399	34278	34291	57942	57942					0.2202354346145512
RRRRVVLLPVA	11	Unmodified	_RRRRVVLLPVA_					0	0	0			REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.6360168457031	3	445.633362	1333.87826	1.3928	0.00062067	4.2688	0.0019023	5.6616	0.002523	445.6352024508616	36.513	1.0806	36.953	36.745	37.825	0.44043					121	25	6	0	0	0	0.78391	1	2929	2929		14.694	1.7362	1	12493000	+		51264	25399	34279	34292	57943	57943					0.2246721500721378
RRRSRRRR	8	Unmodified	_RRRSRRRR_					0	0	0		ENSG00000129245|ENST00000250113|FXR2;ENST00000181839.8_1_7:39990221-39990641:+|nuORF;ENST00000476672.1_1_3:180675662-180688154:+|nuORF;nc|ENSG00000114416|P51114-3|FXR1;nc|ENSG00000114416|P51114-2|FXR1;ENSG00000114416|ENST00000357559|FXR1	ENSG00000129245|ENST00000250113|FXR2;REV__ENSG00000114416|ENST00000357559|FXR1	ENSG00000129245|ENST00000250113|FXR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.2574768066406	3	400.2574	1197.75037	0.012697	5.082E-06	1.0294	0.00041202	1.0421	0.0004171	400.2575969939214	15.439	0.19433	15.496	15.389	15.583	0.057872					14	6	3	0	0	0	0.7961	1	29	29		19.997	3.2794	1	71382			51265	3579;18046	34280	34293	57944	57944					0.15940512256520378
RRRTARIR	8	Unmodified	_RRRTARIR_					0	0	0			REV__ENST00000323039.9_2_19:40321124-40324722:-|nuORF	REV__ENST00000323039.9_2_19:40321124-40324722:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.8536987304688	2	542.849765	1083.68498	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.52	1	117.46	116.96	117.96	-0.064972								0	0	0	0.30976	1	14039	14039		12.959	0.75233	1		+		51266	25027	34281	34294	57945	57945					0.14648098010820831
RRRTPGGVF	9	Unmodified	_RRRTPGGVF_					0	0	0		ENSG00000164902|ENST00000297540|PHAX	ENSG00000164902|ENST00000297540|PHAX	ENSG00000164902|ENST00000297540|PHAX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3029174804688	2	523.304324	1044.5941	1.0264	0.00053713	-2.6027	-0.001362	-1.5763	-0.00082486	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.76764	1	8715	8715		34.173	6.2903	1	3817300			51267	6021	34282	34295	57946	57946					0.0735820924271593
RRRTPMWRFWY	11	Unmodified	_RRRTPMWRFWY_					0	0	0		chr2:27239232-27239697|26|20.92|0.39|5.75|+|1|CAD,CAD|1	chr2:27239232-27239697|26|20.92|0.39|5.75|+|1|CAD,CAD|1	chr2:27239232-27239697|26|20.92|0.39|5.75|+|1|CAD,CAD|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.22607421875	4	414.468852	1653.8463	0.50121	0.00020774	-2.5077	-0.0010394	-2.0065	-0.00083163	414.4676243969955	26.932	0.76493	26.756	26.296	27.06	-0.17559					22	16	2	0	0	0	0.18318	1	1550	1550		6.001	4.4781	1	29091			51268	332	34283	34296	57947	57947					0.04553479261744542
RRRTSVRLPL	10	Unmodified	_RRRTSVRLPL_					0	0	0			REV__ENSG00000177675|ENST00000313599|CD163L1	REV__ENSG00000177675|ENST00000313599|CD163L1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3826293945312	2	627.399287	1252.78402	1.385	0.00086897	3.3122	0.0020781	4.6973	0.0029471	627.4004413295825	111.79	0.10976	111.9	111.83	111.94	0.11118					5	3	2	0	0	0	0.37624	1	12050	12050		14.137	0	1	330930	+		51269	22223	34284	34297	57948	57948					0.16774076185083686
RRRVSRNMKKY	11	Unmodified	_RRRVSRNMKKY_					0	0	0		ENST00000339992.3_1_10:124909690-124909765:+|nuORF	ENST00000339992.3_1_10:124909690-124909765:+|nuORF	ENST00000339992.3_1_10:124909690-124909765:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.95703125	3	498.624649	1492.85212	-0.24645	-0.00012288	-2.8684	-0.0014303	-3.1149	-0.0015531	498.62308144457916	21.663	1.0696	21.599	21.115	22.184	-0.064743					82	38	3	0	0	0	0.78683	1	671	671		14.086	3.4992	1	61443			51270	10228	34285	34298	57949	57949					0.12540577773415862
RRRVVYMRWYK	11	Unmodified	_RRRVVYMRWYK_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.63916015625	3	538.305028	1611.89325	-1.4902	-0.00080218	2.3468	0.0012633	0.85658	0.0004611	538.3061488564512	110.54	0.85041	110.54	110.07	110.92	-0.0074387					67	26	4	0	0	0	0.8498	1	11754	11754		6.001	0.30226	1	283890	+		51271	23243	34286	34299	57950	57950					0.11178338812896982
RRRWGVTP	8	Unmodified	_RRRWGVTP_					0	0	0			REV__ENST00000447310.5_1_19:58067715-58071064:-|nuORF	REV__ENST00000447310.5_1_19:58067715-58071064:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	514.29833984375	2	514.299042	1026.58353	-0.29361	-0.00015101	-2.1307	-0.0010958	-2.4243	-0.0012468	514.298462804293	96.228	2.3462	96.459	94.984	97.33	0.23103					132	55	3	0	0	0	0.86791	1	9907	9907		28.254	2.6802	1	616300	+		51272	26818	34287	34300	57951	57951					0.07130226588265032
RRRWLLRLGPR	11	Unmodified	_RRRWLLRLGPR_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.6485290527344	3	493.647894	1477.92185	0.24426	0.00012058	3.1224	0.0015414	3.3667	0.001662	493.6494164548298	44.568	2.4513	44.545	43.895	46.346	-0.023079					82	57	2	0	0	0	0.76892	1	3506	3506		17.833	8.187	1	516410	+		51273	18883	34288	34301	57952	57952					0.2020082450433165
RRRWLLRLGPR	11	Unmodified	_RRRWLLRLGPR_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.9848327636719	3	493.647894	1477.92185	0.28936	0.00014284	3.2941	0.0016261	3.5835	0.001769	493.6493656295497	44.418	1.6555	44.467	43.631	45.286	0.048996					106	39	4	0	0	0	0.76892	2	3188	3188;3199		17.833	8.187	1	509790	+		51274	18883	34288	34301	57953;57954	57953					0.2020082450433165
RRRWLLRLGPR	11	Unmodified	_RRRWLLRLGPR_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.9835510253906	3	493.647894	1477.92185	-0.090194	-4.4524E-05	3.7222	0.0018375	3.632	0.0017929	493.64966914482096	44.463	1.6429	44.405	43.685	45.328	-0.058258					115	39	4	0	0	0	0.80813	1	3174	3174		9.6461	3.6451	1	603320	+		51275	18883	34288	34301	57955	57955					0.2020082450433165
RRRWRQRRRWP	11	Unmodified	_RRRWRQRRRWP_					0	0	0			REV__ENST00000372724.5_1_10:76586363-76598485:+|nuORF	REV__ENST00000372724.5_1_10:76586363-76598485:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	427.30267333984375	4	428.004354	1707.98831	1.3368	0.00057218	-1.0357	-0.00044326	0.30119	0.00012891	428.25400379088785	68.736	0.14079	68.769	68.673	68.814	0.033005					5	4	2	0	0	0	0.18408	1	6568	6568		0.3405	0	1	28831	+		51276	25727	34289	34302	57956	57956					0.16263453118949656
RRRWRRRRFA	10	Unmodified	_RRRWRRRRFA_					0	0	0			REV__nc|ENSG00000135636|O75923-3|DYSF	REV__nc|ENSG00000135636|O75923-3|DYSF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.97503662109375	3	505.975004	1514.90318	1.8417	0.00093188	-3.2984	-0.0016689	-1.4566	-0.00073702	505.97323302484097	107.86	0.30511	107.95	107.71	108.01	0.084465					27	9	4	0	0	0	0.86151	1	13167	13167		15.333	9.3321	1	9659400	+		51277	29867	34290	34303	57957	57957					0.16632707653138823
RRRWVRLRRRD	11	Unmodified	_RRRWVRLRRRD_					0	0	0		nc|ENSG00000135636|O75923-3|DYSF;nc|ENSG00000135636|O75923-9|DYSF;nc|ENSG00000135636|O75923|DYSF;nc|ENSG00000135636|O75923-14|DYSF;nc|ENSG00000135636|O75923-6|DYSF;nc|ENSG00000135636|O75923-12|DYSF;nc|ENSG00000135636|O75923-5|DYSF;nc|ENSG00000135636|O75923-11|DYSF;nc|ENSG00000135636|O75923-4|DYSF;nc|ENSG00000135636|O75923-10|DYSF;nc|ENSG00000135636|O75923-2|DYSF;nc|ENSG00000135636|O75923-8|DYSF;nc|ENSG00000135636|O75923-7|DYSF;ENSG00000135636|ENST00000410020|DYSF;nc|ENSG00000135636|O75923-15|DYSF	nc|ENSG00000135636|O75923-3|DYSF	nc|ENSG00000135636|O75923-3|DYSF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2570495605469	4	407.001545	1623.97708	-0.51897	-0.00021122	-3.488	-0.0014196	-4.007	-0.0016308	407.25002719331786	55.3	0.21645	55.273	55.127	55.343	-0.027279					6	4	2	0	0	0	0.18415	1	5033	5033		2.8518	1.3288	1	37189			51278	4041	34291	34304	57958	57958					0.19004631024790797
RRSFKHILFRR	11	Unmodified	_RRSFKHILFRR_					0	0	0		ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	505.9744873046875	3	505.975899	1514.90587	-0.68596	-0.00034708	-2.3609	-0.0011946	-3.0469	-0.0015417	505.974616154594	107.82	0.43327	107.82	107.44	107.87	0					39	10	6	0	0	0	0.78083	1	11221	11221		15.337	6.5382	1	131910000			51279	7583	34292	34305	57959	57959					0.16901118267423954
RRSFKHILFRR	11	Unmodified	_RRSFKHILFRR_					0	0	0		ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	505.9741516113281	3	505.975899	1514.90587	-0.056892	-2.8786E-05	-4.1816	-0.0021158	-4.2385	-0.0021446	505.9737057803583	107.88	0.52493	107.84	107.4	107.93	-0.042404					43	12	6	0	0	0	0.70278	2	11763	11752;11763		31.068	6.9462	1	142400000			51280	7583	34292	34305	57960;57961	57961					0.16901118267423954
RRSFKHILFRR	11	Unmodified	_RRSFKHILFRR_					0	0	0		ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.97418212890625	3	505.975899	1514.90587	-0.4082	-0.00020654	-3.5291	-0.0017856	-3.9373	-0.0019922	505.9740917218288	107.84	1.5629	107.98	106.51	108.07	0.13866					111	38	5	0	0	0	0.77803	1	11604	11604		15.921	2.9632	1	368330000			51281	7583	34292	34305	57962	57962					0.16901118267423954
RRSFKHILFRR	11	Unmodified	_RRSFKHILFRR_					0	0	0		ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.9739685058594	3	505.975899	1514.90587	-1.5955	-0.00080729	-1.4014	-0.00070907	-2.9969	-0.0015164	505.97512863626235	107.88	0.72025	107.92	107.25	107.97	0.036125					62	17	5	0	0	0	0.75121	2	11541	11528;11541		21.78	9.3476	1	242270000			51282	7583	34292	34305	57963;57964	57964					0.16901118267423954
RRSFKHILFRR	11	Unmodified	_RRSFKHILFRR_					0	0	0		ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	505.975899	1514.90587	1.8417	0.00093188	-5.0675	-0.002564	-3.2257	-0.0016321	505.97323302484097	107.86	0.30511	107.95	107.71	108.01	0.084465	0.03684	-0.0015733	NaN	31.068	27	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9659400			51283	7583	34292	34305							0.16901118267423954
RRSGDPALL	9	Unmodified	_RRSGDPALL_					0	0	0			REV__ENSG00000104529|ENST00000618139|EEF1D	REV__ENSG00000104529|ENST00000618139|EEF1D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.7838439941406	2	492.78289	983.551228	-0.78798	-0.0003883	4.1974	0.0020684	3.4094	0.0016801	492.78488722274767	46.323	1.5481	46.294	45.886	47.434	-0.028782					98	38	4	0	0	0	0.35373	1	3767	3767		60.972	0.67798	1	3713600	+		51284	17462	34293	34306	57965	57965					0.05879394394617066
RRSGPWRLRRL	11	Unmodified	_RRSGPWRLRRL_					0	0	0		ENST00000422955.5_2_3:49977585-50000034:+|nuORF	ENST00000422955.5_2_3:49977585-50000034:+|nuORF	ENST00000422955.5_2_3:49977585-50000034:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.9630432128906	3	484.963882	1451.86982	-0.86787	-0.00042089	-1.9608	-0.00095093	-2.8287	-0.0013718	484.9627353355	16.303	0.26264	16.351	16.246	16.508	0.047804					27	11	3	0	0	0	0.80593	1	134	134		10.104	0.45776	1	158960			51285	11490	34294	34307	57966	57966					0.16195661090569047
RRSILKRQKH	10	Unmodified	_RRSILKRQKH_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.2811584472656	3	441.2811	1320.82147	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.754	1	40.723	40.223	41.223	-0.030991								0	0	0	0.45132	1	2926	2926		16.717	9.3177	1				51286	14896	34295	34308	57967	57967					0.17389167450687637
RRSILKRQKHL	11	Unmodified	_RRSILKRQKHL_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3039855957031	3	478.975788	1433.90553	0.35245	0.00016881	-3.2435	-0.0015536	-2.8911	-0.0013847	478.9741095971511	52.816	1.6716	52.886	52.36	54.032	0.070713					123	47	3	0	0	0	0.74771	2	4362	4235;4362		22.562	5.3948	1	295530			51287	14896	34296	34309	57968;57969	57969					0.2059369854760007
RRSILKRQKHL	11	Unmodified	_RRSILKRQKHL_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9740295410156	3	478.975788	1433.90553	-0.20548	-9.8418E-05	-2.506	-0.0012003	-2.7115	-0.0012987	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.84494	1	3464	3464		6.3209	0.6221	1	468190			51288	14896	34296	34309	57970	57970					0.2059369854760007
RRSILKRQKHL	11	Unmodified	_RRSILKRQKHL_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3088073730469	3	478.975788	1433.90553	-0.3619	-0.00017334	-1.9452	-0.00093169	-2.3071	-0.001105	478.9747142061381	50.735	1.3969	50.643	50.107	51.504	-0.091797					89	39	3	0	0	0	0.81021	1	3942	3942		9.2118	0	1	284170			51289	14896	34296	34309	57971	57971					0.2059369854760007
RRSIQPKTKP	10	Unmodified	_RRSIQPKTKP_					0	0	0		nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80;ENSG00000144406|ENST00000673920|UNC80;nc|ENSG00000144406|Q8N2C7-5|UNC80	nc|ENSG00000144406|Q8N2C7-7|UNC80	nc|ENSG00000144406|Q8N2C7-7|UNC80	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	605.8712158203125	2	605.872571	1209.73059	-0.19668	-0.00011917	-0.59138	-0.0003583	-0.78806	-0.00047747	605.8720562136382	100.58	1.534	100.58	100.08	101.62	0					94	35	4	0	0	0	0.86348	1	10172	10172		31.53	10.583	1	971210			51290	4705	34297	34310	57972	57972					0.13411278682542616
RRSKAAAL	8	Unmodified	_RRSKAAAL_					0	0	0			REV__ENST00000374677.7_1_6:33170845-33171339:+|nuORF	REV__ENST00000374677.7_1_6:33170845-33171339:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7735595703125	2	436.774868	871.535184	-0.34985	-0.00015281	-2.9642	-0.0012947	-3.314	-0.0014475	436.77383375696394	27.418	1.1225	27.379	27.041	28.164	-0.038523					45	25	2	0	0	0	0.80706	1	1320	1320		19.36	1.0356	1	85606	+		51291	25791	34298	34311	57973	57973					0.0942773294835888
RRSKGKKP	8	Unmodified	_RRSKGKKP_					0	0	0			REV__ENST00000231229.8_2_5:180374644-180376241:+|nuORF	REV__ENST00000231229.8_2_5:180374644-180376241:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.80572509765625	2	478.809242	955.603932	-2.669	-0.0012779	-4.0656	-0.0019466	-6.7346	-0.0032246	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.8347	1	2727	2727		23.042	7.4007	1	370420	+		51292	24196	34299	34312	57974	57974					0.12435397248088975
RRSLEKEKN	9	Unmodified	_RRSLEKEKN_					0	0	0		ENSG00000198937|ENST00000373408|CCDC167	ENSG00000198937|ENST00000373408|CCDC167	ENSG00000198937|ENST00000373408|CCDC167	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.3330688476562	2	580.330736	1158.64692	0.57993	0.00033655	2.6626	0.0015452	3.2426	0.0018818	580.33221961555	39.911	0.8952	39.917	39.495	40.39	0.0065002					58	22	4	0	0	0	0.28163	1	2477	2477		66.429	7.6473	1	1007900			51293	8375	34300	34313	57975	57975					0.07394122514847368
RRSLGRGVV	9	Unmodified	_RRSLGRGVV_					0	0	0		ENST00000469750.5_1_7:2583168-2595320:-|nuORF	ENST00000469750.5_1_7:2583168-2595320:-|nuORF	ENST00000469750.5_1_7:2583168-2595320:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.31256103515625	2	500.312149	998.609745	-0.5334	-0.00026686	3.3326	0.0016674	2.7992	0.0014005	500.31352313312107	78.706	0.69234	78.833	78.542	79.235	0.12695					47	19	3	0	0	0	0.76764	1	7442	7442		34.173	0	1	162420			51294	12209	34301	34314	57976	57976					0.1103849575976028
RRSLKRRKGFL	11	Unmodified	_RRSLKRRKGFL_					0	0	0		ENST00000588797.5_1_19:44332062-44332416:+|nuORF	ENST00000588797.5_1_19:44332062-44332416:+|nuORF	ENST00000588797.5_1_19:44332062-44332416:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.970703125	3	472.972266	1415.89497	-1.6394	-0.00077538	-1.0525	-0.00049779	-2.6919	-0.0012732	472.9717127008119	49.434	3.3366	49.434	48.538	51.875	0					243	82	4	0	0	0	0.84494	1	4015	4015		6.3209	0.6221	1	1017000			51295	14220	34302	34315	57977	57977					0.20365715893149172
RRSLLKSD	8	Unmodified	_RRSLLKSD_					0	0	0		ENST00000040663.7_1_19:13879748-13879829:+|nuORF	ENST00000040663.7_1_19:13879748-13879829:+|nuORF	ENST00000040663.7_1_19:13879748-13879829:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7908020019531	2	487.790715	973.566878	-1.4694	-0.00071678	1.0759	0.00052482	-0.39353	-0.00019196	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.81897	1	8247	8247		20.947	2.6225	1	607090			51296	9071	34303	34316	57978	57978					0.07903680911658739
RRSLLLLVKH	10	Unmodified	_RRSLLLLVKH_					0	0	0		nc|ENSG00000058804|Q9BTX1-3|NDC1;nc|ENSG00000058804|Q9BTX1-6|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;nc|ENSG00000058804|Q9BTX1-2|NDC1;ENSG00000058804|ENST00000371429|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1	nc|ENSG00000058804|Q9BTX1-3|NDC1	nc|ENSG00000058804|Q9BTX1-3|NDC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2687683105469	3	412.275063	1233.80336	-1.8911	-0.00077967	-3.8941	-0.0016055	-5.7853	-0.0023851	412.2732020495918	45.988	1.8124	46.004	45.283	47.095	0.015511					102	49	3	0	0	0	0.37624	1	3456	3456		21.686	0.8486	1	930980			51297	1048	34304	34317	57979	57979					0.19581032476003202
RRSLPLQLQP	10	Unmodified	_RRSLPLQLQP_					0	0	0			REV__ENSG00000257704|ENST00000552360|INAFM1	REV__ENSG00000257704|ENST00000552360|INAFM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2467956542969	3	403.247173	1206.71969	-1.9293	-0.00077799	1.1746	0.00047366	-0.7547	-0.00030433	403.24758115209465	104.53	3.0767	104.62	103.79	106.87	0.093857					248	75	5	0	0	0	0.8505	1	11062	11062		13.508	0	1	9819800	+		51298	23923	34305	34318	57980	57980					0.12459876308275852
RRSLRGLA	8	Unmodified	_RRSLRGLA_					0	0	0			REV__ENSG00000180929|ENST00000322241|GPR62	REV__ENSG00000180929|ENST00000322241|GPR62	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.79071044921875	2	464.793592	927.572632	-1.9025	-0.00088428	-4.2508	-0.0019758	-6.1534	-0.00286	464.7914872059108	34.459	1.5924	34.459	34.009	35.601	0					104	42	3	0	0	0	0.8347	1	1819	1819		23.042	2.5607	1	277220	+		51299	22429	34306	34319	57981	57981					0.1059482421399025
RRSLVPCRL	9	Unmodified	_RRSLVPCRL_					0	0	0			REV__ENST00000513648.5_1_5:102201854-102209236:+|nuORF	REV__ENST00000513648.5_1_5:102201854-102209236:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3261108398438	2	550.329485	1098.64442	0.24684	0.00013584	-4.4268	-0.0024362	-4.1799	-0.0023003	550.327086838159	99.973	1.2029	100.19	99.606	100.81	0.21511					73	27	4	0	0	0	0.7932	1	10486	10486		26.693	4.733	1	361560	+		51300	27996	34307	34320	57982	57982					0.09903995576178204
RRSLVRRRMLE	11	Unmodified	_RRSLVRRRMLE_					0	0	0		ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	ENSG00000235034|ENST00000425202|C19orf81	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2989501953125	3	491.296532	1470.86777	2.8436	0.001397	2.3878	0.0011731	5.2314	0.0025702	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.79476	1	12945	12945		12.433	3.6335	1	3274400			51301	8748	34308	34321	57983	57983					0.15116864290484955
RRSPAGLIG	9	Unmodified	_RRSPAGLIG_					0	0	0		ENST00000331334.4_1_14:96001039-96001186:+|nuORF	ENST00000331334.4_1_14:96001039-96001186:+|nuORF	ENST00000331334.4_1_14:96001039-96001186:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.7789306640625	2	463.780151	925.545748	-1.1455	-0.00053125	-0.84676	-0.00039271	-1.9922	-0.00092396	463.7795530361885	39.87	0.79184	39.876	39.598	40.39	0.0065002					32	19	3	0	0	0	0.77546	1	2474	2474		31.955	2.8053	1	252330			51302	10120	34309	34322	57984	57984					0.079997156028071
RRSPAGLIG	9	Unmodified	_RRSPAGLIG_					0	0	0		ENST00000331334.4_1_14:96001039-96001186:+|nuORF	ENST00000331334.4_1_14:96001039-96001186:+|nuORF	ENST00000331334.4_1_14:96001039-96001186:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	463.780151	925.545748	-0.022801	-1.0575E-05	-2.19	-0.0010157	-2.2128	-0.0010263	463.77892097410154	39.841	0.70793	39.793	39.566	40.274	-0.04789	-0.029895	-0.00064539	NaN	31.955	34	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	282990			51303	10120	34309	34322							0.079997156028071
RRSPGLKL	8	Unmodified	_RRSPGLKL_					0	0	0		ENST00000462787.5_1_3:160117600-160117795:+|nuORF	ENST00000462787.5_1_3:160117600-160117795:+|nuORF	ENST00000462787.5_1_3:160117600-160117795:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.7998046875	2	463.798343	925.582134	0.22161	0.00010278	4.2396	0.0019663	4.4612	0.0020691	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.86288	1	3320	3320		26.796	6.3143	1	1570500			51304	12050	34310	34323	57985	57985					0.11636592499519338
RRSPLLHLQ	9	Unmodified	_RRSPLLHLQ_					0	0	0			REV__ENSG00000138073|ENST00000260643|PREB	REV__ENSG00000138073|ENST00000260643|PREB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3406372070312	2	560.340907	1118.66726	-0.40673	-0.00022791	-0.80506	-0.00045111	-1.2118	-0.00067902	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.76764	1	10829	10829		34.173	7.4796	1	60162000	+		51305	19434	34311	34324	57986	57986					0.11267337965318802
RRSPLPNPPN	10	Unmodified	_RRSPLPNPPN_					0	0	0			REV__nc|ENSG00000138193|Q9P212-2|PLCE1	REV__nc|ENSG00000138193|Q9P212-2|PLCE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3192749023438	2	574.320171	1146.62579	-1.0331	-0.00059332	-0.2741	-0.00015742	-1.3072	-0.00075074	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.80179	1	9780	9780		39.253	10.083	1	1380900	+		51306	19450	34312	34325	57987	57987					0.058341572059816826
RRSPLPNPPN	10	Unmodified	_RRSPLPNPPN_					0	0	0			REV__nc|ENSG00000138193|Q9P212-2|PLCE1	REV__nc|ENSG00000138193|Q9P212-2|PLCE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3199462890625	2	574.320171	1146.62579	0.59155	0.00033974	-1.7492	-0.0010046	-1.1577	-0.00066488	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.80179	1	9739	9739		39.253	6.5023	1	1777600	+		51307	19450	34312	34325	57988	57988					0.058341572059816826
RRSPLPNPPN	10	Unmodified	_RRSPLPNPPN_					0	0	0			REV__nc|ENSG00000138193|Q9P212-2|PLCE1	REV__nc|ENSG00000138193|Q9P212-2|PLCE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.319580078125	2	574.320171	1146.62579	0.81882	0.00047026	-1.9949	-0.0011457	-1.1761	-0.00067548	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.80179	1	9661	9661		39.253	4.1008	1	1866200	+		51308	19450	34312	34325	57989	57989					0.058341572059816826
RRSPLPNPPN	10	Unmodified	_RRSPLPNPPN_					0	0	0			REV__nc|ENSG00000138193|Q9P212-2|PLCE1	REV__nc|ENSG00000138193|Q9P212-2|PLCE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3170776367188	2	574.320171	1146.62579	-1.3729	-0.0007885	0.18056	0.0001037	-1.1924	-0.0006848	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.86348	1	9774	9774		31.53	5.9558	1	1586900	+		51309	19450	34312	34325	57990	57990					0.058341572059816826
RRSPLTGN	8	Unmodified	_RRSPLTGN_					0	0	0		ENST00000248901.10_1_22:37710662-37711253:+|nuORF	ENST00000248901.10_1_22:37710662-37711253:+|nuORF	ENST00000248901.10_1_22:37710662-37711253:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.75439453125	2	450.754133	899.493713	0.64847	0.0002923	-0.5493	-0.0002476	0.099173	4.4703E-05	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.91977	1	7832	7832		45.952	0	1	162850			51310	9282	34313	34326	57991	57991					0.03994552189033129
RRSQHMSTKS	10	Unmodified	_RRSQHMSTKS_					0	0	0			REV__ENST00000528749.1_1_1:150934626-150935279:+|nuORF	REV__ENST00000528749.1_1_1:150934626-150935279:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7851867675781	3	406.543772	1216.60949	-0.34519	-0.00014033	0.77477	0.00031498	0.42958	0.00017464	406.5441399035513	29.247	0.52773	29.204	28.901	29.428	-0.043095					33	20	2	0	0	0	0.37624	1	1538	1538		29.551	0	1	20992	+		51311	19801	34314	34327	57992	57992					0.009847079775909151
RRSRHIVLCV	10	Unmodified	_RRSRHIVLCV_					0	0	0			REV__ENSG00000183150|ENST00000651487|GPR19	REV__ENSG00000183150|ENST00000651487|GPR19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8695678710938	2	619.866766	1237.71898	0.85836	0.00053207	3.2488	0.0020138	4.1071	0.0025459	619.8686410709195	93.975	2.8634	94.136	92.286	95.15	0.16119					249	68	4	0	0	0	0.85934	1	9669	9669		35.618	10.492	1	2724800	+		51312	22583	34315	34328	57993	57993					0.10962758387586291
RRSRHIVLCV	10	Unmodified	_RRSRHIVLCV_					0	0	0			REV__ENSG00000183150|ENST00000651487|GPR19	REV__ENSG00000183150|ENST00000651487|GPR19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8693237304688	2	619.866766	1237.71898	0.87763	0.00054401	3.443	0.0021342	4.3206	0.0026782	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.86589	1	9848	9848		29.15	4.6304	1	6574700	+		51313	22583	34315	34328	57994	57994					0.10962758387586291
RRSRLFDAI	9	Unmodified	_RRSRLFDAI_					0	0	0			REV__nc|ENSG00000104888|Q9P2U7-2|SLC17A7	REV__nc|ENSG00000104888|Q9P2U7-2|SLC17A7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3294067382812	2	567.330539	1132.64652	-0.468	-0.00026551	-0.52667	-0.00029879	-0.99467	-0.0005643	567.330130226139	95.712	2.0668	95.712	95.357	97.424	0					107	47	3	0	0	0	0.78983	1	9650	9650		27.882	1.8189	1	608220	+		51314	17485	34316	34329	57995	57995					0.0855074758567298
RRSRPSSRGAS	11	Unmodified	_RRSRPSSRGAS_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;ENST00000466429.5_1_6:56323805-56328761:-|nuORF	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.8358764648438	2	608.834508	1215.65446	0.093851	5.714E-05	4.0001	0.0024354	4.094	0.0024926	608.836828431824	110.46	1.0631	110.5	110.23	111.29	0.031738					103	33	4	0	0	0	0.72739	1	12157	12157		27.047	0.3544	1	3714300			51315	5149	34317	34330	57996	57996					0.05526274835165168
RRSRRGKKVP	10	Unmodified	_RRSRRGKKVP_					0	0	0			REV__nc|ENSG00000118058|Q03164-2|KMT2A	REV__nc|ENSG00000118058|Q03164-2|KMT2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.9327392578125	3	413.933811	1238.7796	0.12638	5.2312E-05	-2.8215	-0.0011679	-2.6952	-0.0011156	413.93257989675	45.178	2.8999	45.16	43.533	46.433	-0.018585					218	68	4	0	0	0	0.85441	1	3622	3622		20.837	0.84038	1	518900	+		51316	18291	34318	34331	57997	57997					0.16976611762174798
RRSSGHSEYS	10	Unmodified	_RRSSGHSEYS_					0	0	0		ENSG00000143520|ENST00000388718|FLG2;CON__Q5D862	ENSG00000143520|ENST00000388718|FLG2	ENSG00000143520|ENST00000388718|FLG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	583.2702026367188	2	583.270875	1164.5272	-0.21621	-0.00012611	-0.85036	-0.00049599	-1.0666	-0.0006221	583.2707370345603	20.22	0.59764	20.15	19.821	20.419	-0.070011					45	26	2	0	0	0	0.82886	1	507	507		37.812	8.662	1	46091		+	51317	626	34319	34332	57998	57998					-0.04848490829704133
RRSSHYPA	8	Unmodified	_RRSSHYPA_					0	0	0		nc|ENSG00000171862|P60484-2|PTEN	nc|ENSG00000171862|P60484-2|PTEN	nc|ENSG00000171862|P60484-2|PTEN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.2538146972656	2	487.251757	972.488962	0.64569	0.00031461	3.6005	0.0017544	4.2462	0.002069	487.25338430429883	28.873	0.79298	28.699	28.399	29.192	-0.17336					52	18	4	0	0	0	0.93529	1	1802	1802		52.299	0.96372	1	1461400			51318	15094	34320	34333	57999	57999					0.001616680462802833
RRSSLNPTRG	10	Unmodified	_RRSSLNPTRG_					0	0	0			REV__ENST00000370790.5_1_X:133930872-133931067:-|nuORF	REV__ENST00000370790.5_1_X:133930872-133931067:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	571.3308715820312	2	572.320703	1142.62685	0.87309	0.00049969	-4.4088	-0.0025233	-3.5358	-0.0020236	572.3181393357646	102.2	0.58708	102.34	102.02	102.61	0.13523					18	14	2	0	0	0	0.37624	1	10729	10729		45.972	1.5951	1	91175	+		51319	25666	34321	34334	58000	58000					0.06124371574878751
RRSTRQKTT	9	Unmodified	_RRSTRQKTT_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297729492188	2	567.328528	1132.6425	-0.54401	-0.00030863	3.2756	0.0018584	2.7316	0.0015497	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.75725	2	8786	8774;8786		36.447	5.9431	1	4477200			51320	5245	34322	34335	58001;58002	58002					0.08148658091931793
RRSTRQKTT	9	Unmodified	_RRSTRQKTT_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3274536132812	2	567.328528	1132.6425	-0.51077	-0.00028978	2.8395	0.0016109	2.3288	0.0013212	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.77244	1	9396	9396		32.812	7.2384	1	11042000			51321	5245	34322	34335	58003	58003					0.08148658091931793
RRSTRQKTT	9	Unmodified	_RRSTRQKTT_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3294677734375	2	567.328528	1132.6425	1.497	0.00084932	0.68943	0.00039114	2.1865	0.0012405	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.77244	1	9768	9768		32.812	2.3088	1	15259000			51322	5245	34322	34335	58004	58004					0.08148658091931793
RRSTRQKTT	9	Unmodified	_RRSTRQKTT_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.329345703125	2	567.328528	1132.6425	0.4851	0.00027521	1.6835	0.0009551	2.1686	0.0012303	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.76764	1	9450	9450		34.173	1.3601	1	18558000			51323	5245	34322	34335	58005	58005					0.08148658091931793
RRSTRQKTT	9	Unmodified	_RRSTRQKTT_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.32958984375	2	567.328528	1132.6425	0.79571	0.00045143	1.3318	0.00075556	2.1275	0.001207	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.77244	3	9440	9440;9670;9881		32.812	3.6795	1	18145000			51324	5245	34322	34335	58006;58007;58008	58006					0.08148658091931793
RRSTRQKTT	9	Unmodified	_RRSTRQKTT_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3298950195312	2	567.328528	1132.6425	-1.3957	-0.00079181	3.9454	0.0022383	2.5497	0.0014465	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.73802	1	8974	8974		37.812	8.6415	1	5956400			51325	5245	34322	34335	58009	58009					0.08148658091931793
RRSTRQKTT	9	Unmodified	_RRSTRQKTT_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3289794921875	2	567.328528	1132.6425	1.3743	0.0007797	1.1896	0.00067487	2.5639	0.0014546	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.78983	1	11126	11126		27.882	0	1	6182600			51326	5245	34322	34335	58010	58010					0.08148658091931793
RRSVIVAVNR	10	Unmodified	_RRSVIVAVNR_					0	0	0			REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	585.3642578125	2	585.364913	1168.71527	-0.18229	-0.0001067	-0.22107	-0.00012941	-0.40336	-0.00023611	585.3648405921209	97.546	1.1049	97.595	97.127	98.232	0.048157					65	25	3	0	0	0	0.60985	1	10393	10393		49.536	16.724	1	487150	+		51327	28668	34323	34336	58011	58011					0.1376641188535359
RRSVIVAVNR	10	Unmodified	_RRSVIVAVNR_					0	0	0			REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	585.364913	1168.71527	-0.34304	-0.0002008	-0.070844	-4.1469E-05	-0.41389	-0.00024227	585.365021122546	97.98	1.0509	97.98	97.552	98.603	0	0.26475	0.0010761	NaN	49.536	47	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	151400	+		51328	28668	34323	34336							0.1376641188535359
RRSVIVAVNR	10	Unmodified	_RRSVIVAVNR_					0	0	0			REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	585.364913	1168.71527	0.75949	0.00044458	-0.92741	-0.00054287	-0.16792	-9.8295E-05	585.3645901602852	97.386	0.87986	97.617	97.25	98.13	0.23103	-0.097557	7.3254E-05	NaN	49.536	46	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	238960	+		51329	28668	34323	34336							0.1376641188535359
RRSVIVAVNR	10	Unmodified	_RRSVIVAVNR_					0	0	0			REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	585.364913	1168.71527	0.85661	0.00050143	-0.80654	-0.00047212	0.050068	2.9308E-05	585.3646708628038	97.402	0.80933	97.563	97.339	98.148	0.16074	-0.15182	0.00021475	NaN	49.536	43	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	214160	+		51330	28668	34323	34336							0.1376641188535359
RRSVIVAVNR	10	Unmodified	_RRSVIVAVNR_					0	0	0			REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	585.364913	1168.71527	-1.3371	-0.0007827	1.7738	0.0010383	0.43669	0.00025562	585.3663283073569	97.532	0.85178	97.734	97.354	98.206	0.20207	0.018925	0.0032356	NaN	49.536	32	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147810	+		51331	28668	34323	34336							0.1376641188535359
RRSVIVAVNR	10	Unmodified	_RRSVIVAVNR_					0	0	0			REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	585.364913	1168.71527	0.67001	0.0003922	-1.077	-0.00063044	-0.40699	-0.00023824	585.3644197768149	97.243	0.85755	97.644	97.255	98.112	0.40037	-0.071065	-0.00010188	NaN	49.536	33	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	337500	+		51332	28668	34323	34336							0.1376641188535359
RRSVIVAVNR	10	Unmodified	_RRSVIVAVNR_					0	0	0			REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	REV__ENST00000554631.2_1_14:95624158-95624227:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	585.364913	1168.71527	0.94494	0.00055313	5.4195	0.0031724	6.3644	0.0037255	585.3685083703715	97.53	1.1449	97.92	97.443	98.588	0.39065	0.20533	0.0075038	NaN	49.536	56	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	458680	+		51333	28668	34323	34336							0.1376641188535359
RRSYWRHLRRL	11	Unmodified	_RRSYWRHLRRL_					0	0	0		ENSG00000258429|ENST00000288022|PDF	ENSG00000258429|ENST00000288022|PDF	ENSG00000258429|ENST00000288022|PDF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.646240234375	3	533.646553	1597.91783	-0.077893	-4.1568E-05	-2.0809	-0.0011105	-2.1588	-0.001152	533.6454186089467	58.408	0.40391	58.495	58.301	58.705	0.087002					42	17	3	0	0	0	0.88916	1	4956	4956		3.4087	0.19739	1	200620			51334	8911	34324	34337	58012	58012					0.14278735010611854
RRTAAHERLR	10	Unmodified	_RRTAAHERLR_					0	0	0		ENST00000484336.1_1_22:19753345-19753526:+|nuORF;ENST00000329705.11_1_22:19753345-19766776:+|nuORF	ENST00000484336.1_1_22:19753345-19753526:+|nuORF	ENST00000484336.1_1_22:19753345-19753526:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.58184814453125	3	422.581438	1264.72248	-1.733	-0.00073233	3.0122	0.0012729	1.2792	0.00054058	422.5826240153895	97.352	3.8291	97.583	96.825	100.65	0.23103					216	89	4	0	0	0	0.86718	1	10147	10147		20.03	3.5006	1	506650			51335	10104	34325	34338	58013	58013					0.1007114448577795
RRTAQEPRRIA	11	Unmodified	_RRTAQEPRRIA_					0	0	0		ENST00000597578.1_1_16:86524111-86542471:-|nuORF;ENST00000599749.5_1_16:86524596-86542567:-|nuORF	ENST00000597578.1_1_16:86524111-86542471:-|nuORF	ENST00000597578.1_1_16:86524111-86542471:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9325866699219	3	451.932248	1352.77491	-0.13819	-6.2454E-05	1.0259	0.00046362	0.88768	0.00040117	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.71803	1	10719	10719		28.577	2.685	1	924270			51336	14360	34326	34339	58014	58014					0.11263682828757737
RRTASRKTN	9	Unmodified	_RRTASRKTN_					0	0	0		ENST00000590503.5_1_19:37710520-37721347:+|nuORF;ENST00000589413.5_1_19:37710591-37721347:+|nuORF	ENST00000590503.5_1_19:37710520-37721347:+|nuORF	ENST00000590503.5_1_19:37710520-37721347:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167724609375	2	545.31542	1088.61629	0.15577	8.4944E-05	2.4141	0.0013164	2.5698	0.0014014	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.78536	1	9512	9512		29.15	2.4566	1	17220000			51337	14236	34327	34340	58015	58015					0.07552388920476005
RRTFKRKFKIL	11	Unmodified	_RRTFKRKFKIL_					0	0	0		ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.6570129394531	3	498.324417	1491.95142	-1.5014	-0.00074816	-3.65	-0.0018189	-5.1513	-0.002567	498.322475094846	50.129	1.802	50.129	48.892	50.694	0					100	42	3	0	0	0	0.81219	1	4024	4024		8.7993	2.7983	1	141070			51338	6930	34328	34341	58016	58016					0.22512343729840723
RRTFKRKFKIL	11	Unmodified	_RRTFKRKFKIL_					0	0	0		ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	ENSG00000174405|ENST00000442234|LIG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.6563415527344	3	498.324417	1491.95142	-1.2571	-0.00062643	-4.0481	-0.0020173	-5.3052	-0.0026437	498.32235621557885	49.598	1.5877	49.602	48.709	50.297	0.0035934					98	35	4	0	0	0	0.81407	1	4213	4213		8.4073	2.4062	1	206420			51339	6930	34328	34341	58017	58017					0.22512343729840723
RRTFRKKCV	9	Unmodified	_RRTFRKKCV_					0	0	0			REV__ENSG00000173275|ENST00000339249|ZNF449	REV__ENSG00000173275|ENST00000339249|ZNF449	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3582763671875	2	597.356034	1192.69751	3.0849	0.0018428	0.85071	0.00050818	3.9357	0.002351	597.3562180293547	100.36	3.052	100.31	99.202	102.25	-0.052116					175	71	4	0	0	0	0.71772	1	10936	10936		39.253	6.4404	1	3981300	+		51340	21913	34329	34342	58018	58018					0.10887373358855257
RRTFRKKCV	9	Unmodified	_RRTFRKKCV_					0	0	0			REV__ENSG00000173275|ENST00000339249|ZNF449	REV__ENSG00000173275|ENST00000339249|ZNF449	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.358154296875	2	597.356034	1192.69751	-0.45682	-0.00027289	4.1806	0.0024973	3.7238	0.0022245	597.3582006630761	100.19	3.2446	100.23	98.977	102.22	0.046349					174	76	4	0	0	0	0.7932	1	10768	10768		24.203	1.6231	1	4145900	+		51341	21913	34329	34342	58019	58019					0.10887373358855257
RRTFRKKCV	9	Unmodified	_RRTFRKKCV_					0	0	0			REV__ENSG00000173275|ENST00000339249|ZNF449	REV__ENSG00000173275|ENST00000339249|ZNF449	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.3595581054688	2	597.356034	1192.69751	0.89295	0.00053341	2.6477	0.0015816	3.5407	0.002115	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.7932	1	10546	10546		24.519	0.99649	1	2674200	+		51342	21913	34329	34342	58020	58020					0.10887373358855257
RRTGGRGGRPG	11	Unmodified	_RRTGGRGGRPG_					0	0	0			REV__ENST00000553700.5_2_14:31676673-31676775:-|nuORF	REV__ENST00000553700.5_2_14:31676673-31676775:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.3173828125	2	563.818661	1125.62277	-1.0971	-0.00061854	-2.1832	-0.0012309	-3.2803	-0.0018495	564.3187451766267	54.029	0.89402	54.029	53.649	54.543	0					44	25	2	0	0	0	0.68532	1	4502	4502		33.922	1.1092	1	134080	+		51343	28654	34330	34343	58021	58021					0.06498326871860627
RRTGYLKRWPK	11	Unmodified	_RRTGYLKRWPK_					0	0	0		chr1:145925927-145926482|13|20.15|0.35|5.86|-|0|RBM8A,RBM8A|1	chr1:145925927-145926482|13|20.15|0.35|5.86|-|0|RBM8A,RBM8A|1	chr1:145925927-145926482|13|20.15|0.35|5.86|-|0|RBM8A,RBM8A|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.2535705566406	3	487.624755	1459.85244	0.59211	0.00028873	-1.1573	-0.00056435	-0.56523	-0.00027562	487.62414972145456	28.961	0.4733	28.787	28.547	29.021	-0.17336					15	10	2	0	0	0	0.17521	1	1778	1778		12.433	0	1	56129			51344	20	34331	34344	58022	58022					0.14090320764898934
RRTISAPV	8	Unmodified	_RRTISAPV_					0	0	0		nc|ENSG00000198625|O15151-4|MDM4;nc|ENSG00000198625|O15151-5|MDM4;ENSG00000198625|ENST00000367182|MDM4	nc|ENSG00000198625|O15151-4|MDM4	nc|ENSG00000198625|O15151-4|MDM4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2738037109375	2	450.274701	898.534849	-1.2476	-0.00056176	1.6539	0.00074471	0.4063	0.00018295	450.27528872656256	83.472	0.75172	83.472	83.174	83.926	0					34	19	2	0	0	0	0.81548	1	7842	7842		20.482	3.1169	1	107510			51345	8297	34332	34345	58023	58023					0.08152313228515595
RRTISAPV	8	Unmodified	_RRTISAPV_					0	0	0		nc|ENSG00000198625|O15151-4|MDM4;nc|ENSG00000198625|O15151-5|MDM4;ENSG00000198625|ENST00000367182|MDM4	nc|ENSG00000198625|O15151-4|MDM4	nc|ENSG00000198625|O15151-4|MDM4	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	450.274701	898.534849	-0.14199	-6.3935E-05	0.32223	0.00014509	0.18024	8.1158E-05	450.2746568887371	83.435	0.68503	83.502	83.125	83.81	0.066727	-0.025306	6.3057E-05	NaN	20.482	32	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	229020			51346	8297	34332	34345							0.08152313228515595
RRTISAPV	8	Unmodified	_RRTISAPV_					0	0	0		nc|ENSG00000198625|O15151-4|MDM4;nc|ENSG00000198625|O15151-5|MDM4;ENSG00000198625|ENST00000367182|MDM4	nc|ENSG00000198625|O15151-4|MDM4	nc|ENSG00000198625|O15151-4|MDM4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	450.274701	898.534849	0.94465	0.00042535	-5.8733	-0.0026446	-4.9286	-0.0022192	450.2723853500758	83.604	0.17572	83.664	83.585	83.761	0.05925	0.13645	-0.0055163	NaN	20.482	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47414			51347	8297	34332	34345							0.08152313228515595
RRTISAPV	8	Unmodified	_RRTISAPV_					0	0	0		nc|ENSG00000198625|O15151-4|MDM4;nc|ENSG00000198625|O15151-5|MDM4;ENSG00000198625|ENST00000367182|MDM4	nc|ENSG00000198625|O15151-4|MDM4	nc|ENSG00000198625|O15151-4|MDM4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	450.274701	898.534849	-1.1542	-0.00051971	0.79286	0.00035701	-0.36134	-0.0001627	450.27461960453354	83.155	0.6621	83.586	83.294	83.956	0.43108	0.059162	0.00048688	NaN	20.482	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93187			51348	8297	34332	34345							0.08152313228515595
RRTISAPV	8	Unmodified	_RRTISAPV_					0	0	0		nc|ENSG00000198625|O15151-4|MDM4;nc|ENSG00000198625|O15151-5|MDM4;ENSG00000198625|ENST00000367182|MDM4	nc|ENSG00000198625|O15151-4|MDM4	nc|ENSG00000198625|O15151-4|MDM4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	450.274701	898.534849	0.15334	6.9046E-05	-0.06866	-3.0916E-05	0.084682	3.813E-05	450.27448390646725	83.173	0.53741	83.628	83.358	83.895	0.45556	0.10093	-0.00028896	NaN	20.482	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	152510			51349	8297	34332	34345							0.08152313228515595
RRTIVPLHQ	9	Unmodified	_RRTIVPLHQ_					0	0	0			REV__ENST00000340541.4_1_18:9944981-9945035:+|nuORF	REV__ENST00000340541.4_1_18:9944981-9945035:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3410034179688	2	560.340907	1118.66726	-1.1289	-0.00063255	-0.073505	-4.1188E-05	-1.2024	-0.00067374	560.3407299796369	89.624	3.285	89.693	87.185	90.47	0.068703					185	76	4	0	0	0	0.76764	1	9037	9037		34.173	0.25091	1	1038600	+		51350	25246	34333	34346	58024	58024					0.11267337965318802
RRTKAATIIQK	11	Unmodified	_RRTKAATIIQK_					0	0	0		nc|ENSG00000197535|Q9Y4I1-2|MYO5A;nc|ENSG00000197535|Q9Y4I1|MYO5A;ENSG00000197535|ENST00000399233|MYO5A	nc|ENSG00000197535|Q9Y4I1-2|MYO5A	nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4059448242188	2	643.406778	1284.799	0.94326	0.0006069	-2.5215	-0.0016224	-1.5783	-0.0010155	643.4049918963857	105.64	1.1738	105.75	104.98	106.16	0.10766					144	29	6	0	0	0	0.70737	1	11323	11323		30.318	2.4355	1	23114000			51351	8173	34334	34347	58025	58025					0.16799523262397997
RRTKPKGNLK	10	Unmodified	_RRTKPKGNLK_					0	0	0		ENST00000361690.7_1_6:35856682-35888302:-|nuORF	ENST00000361690.7_1_6:35856682-35888302:-|nuORF	ENST00000361690.7_1_6:35856682-35888302:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	599.3776245117188	2	599.380563	1196.74657	2.2233	0.0013326	-1.7579	-0.0010537	0.46535	0.00027892	599.3794612183918	103.02	0.80547	103.24	103.04	103.84	0.22556					35	21	2	0	0	0	0.86718	1	12521	12521		27.882	1.1893	1	2193500			51352	10486	34335	34348	58026	58026					0.15606984919440947
RRTLENGV	8	Unmodified	_RRTLENGV_					0	0	0		ENSG00000149256|ENST00000278550|TENM4	ENSG00000149256|ENST00000278550|TENM4	ENSG00000149256|ENST00000278550|TENM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7673034667969	2	472.76724	943.519927	0.62555	0.00029574	-0.6042	-0.00028565	0.02135	1.0094E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.89494	1	8310	8310		37.159	3.6435	1	508030			51353	5009	34336	34349	58027	58027					0.04590821360523023
RRTLRKDHR	9	Unmodified	_RRTLRKDHR_					0	0	0		nc|ENSG00000113649|O14776-2|TCERG1;nc|ENSG00000113649|O14776|TCERG1;ENSG00000113649|ENST00000679501|TCERG1;ENST00000503741.5_1_5:145883557-145887476:+|nuORF;ENST00000514719.1_1_5:145883057-145886815:+|nuORF;ENST00000506524.5_1_5:145862104-145889630:+|nuORF	nc|ENSG00000113649|O14776-2|TCERG1	nc|ENSG00000113649|O14776-2|TCERG1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.37353515625	2	619.371061	1236.72757	-0.10662	-6.6034E-05	1.5681	0.00097123	1.4615	0.0009052	619.3719649656875	101.89	1.4654	101.89	101.45	102.91	0					98	36	4	0	0	0	0.76764	1	10458	10458		34.173	6.0911	1	1989800			51354	2737	34337	34350	58028	58028					0.11867448348402831
RRTPIGTDRNH	11	Unmodified	_RRTPIGTDRNH_					0	0	0		nc|ENSG00000009954|Q9UIG0-2|BAZ1B;ENSG00000009954|ENST00000339594|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.5739440917969	3	441.572719	1321.69633	0.27594	0.00012185	2.6563	0.0011729	2.9322	0.0012948	441.5738336320527	19.867	0.50718	19.238	18.983	19.49	-0.6296					25	10	3	0	0	0	0.59831	1	580	580		44.639	4.7663	1	220890			51355	759	34338	34351	58029	58029					0.04834830523668643
RRTPVGTGG	9	Unmodified	_RRTPVGTGG_					0	0	0			REV__ENSG00000176435|ENST00000342213|CLEC14A	REV__ENSG00000176435|ENST00000342213|CLEC14A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.75421142578125	2	450.754133	899.493713	0.64847	0.0002923	-0.5493	-0.0002476	0.099173	4.4703E-05	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.76255	1	7781	7781		35.618	0.41757	1	162850	+		51356	22127	34339	34352	58030	58030					0.039945521890558666
RRTPVGTGG	9	Unmodified	_RRTPVGTGG_					0	0	0			REV__ENSG00000176435|ENST00000342213|CLEC14A	REV__ENSG00000176435|ENST00000342213|CLEC14A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7558288574219	2	450.754133	899.493713	0.78548	0.00035406	-0.70514	-0.00031784	0.080345	3.6216E-05	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.58668	1	8254	8254		47.657	6.8792	1	420760	+		51357	22127	34339	34352	58031	58031					0.039945521890558666
RRTRIQVF	8	Unmodified	_RRTRIQVF_					0	0	0		ENSG00000262655|ENST00000576479|SPON1	ENSG00000262655|ENST00000576479|SPON1	ENSG00000262655|ENST00000576479|SPON1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3273315429688	2	538.327799	1074.64105	-1.4902	-0.00080221	0.37298	0.00020079	-1.1172	-0.00060142	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.85277	1	12116	12116		25.45	0.93098	1	4041000			51358	8934	34340	34353	58032	58032					0.10671068793840277
RRTRPDLL	8	Unmodified	_RRTRPDLL_					0	0	0			REV__ENSG00000180767|ENST00000319340|CHST13	REV__ENSG00000180767|ENST00000319340|CHST13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.80859375	2	513.811982	1025.60941	-1.4174	-0.00072826	-4.4658	-0.0022946	-5.8832	-0.0030229	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.88601	1	4068	4068		34.173	2.2177	1	1977600	+		51359	22415	34341	34354	58033	58033					0.09763076039894258
RRTSGRLT	8	Unmodified	_RRTSGRLT_					0	0	0			REV__ENST00000262319.10_1_16:1544257-1544401:+|nuORF	REV__ENST00000262319.10_1_16:1544257-1544401:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.7786560058594	2	473.780682	945.546811	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.754	1	79.853	79.353	80.353	0.098701								0	0	0	0.29452	1	7535	7535		33.516	6.7195	1		+		51360	24415	34342	34355	58034	58034					0.07185929971694804
RRTSPKVS	8	Unmodified	_RRTSPKVS_					0	0	0			REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	REV__nc|ENSG00000091039|Q9BZF1-3|OSBPL8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7772521972656	2	465.777608	929.540663	-0.087401	-4.0709E-05	-0.014423	-6.718E-06	-0.10182	-4.7428E-05	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.86677	1	8052	8052		27.882	1.0861	1	1330000	+		51361	17004	34343	34356	58035	58035					0.07307411740180214
RRTTCLKYLVL	11	Unmodified	_RRTTCLKYLVL_					0	0	0		nc|ENSG00000166200|P61201-2|COPS2;ENSG00000166200|ENST00000388901|COPS2	nc|ENSG00000166200|P61201-2|COPS2	nc|ENSG00000166200|P61201-2|COPS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.9408874511719	3	455.939352	1364.79623	-0.018225	-8.3094E-06	3.6786	0.0016772	3.6604	0.0016689	455.940966623884	20.554	1.3955	19.925	19.49	20.885	-0.6296					70	33	4	0	0	0	0.64964	1	668	668		38.714	8.1452	1	132260			51362	6170	34344	34357	58036	58036					0.12841931813227347
RRTTCLKYLVL	11	Unmodified	_RRTTCLKYLVL_					0	0	0		nc|ENSG00000166200|P61201-2|COPS2;ENSG00000166200|ENST00000388901|COPS2	nc|ENSG00000166200|P61201-2|COPS2	nc|ENSG00000166200|P61201-2|COPS2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	455.939352	1364.79623	0.06556	2.9892E-05	3.678	0.0016769	3.7436	0.0017068	455.9409520747392	20.478	1.0774	20.019	19.595	20.672	-0.4591	0.046976	-4.1703E-07	NaN	38.714	64	24	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101920			51363	6170	34344	34357							0.12841931813227347
RRTVFTRAI	9	Unmodified	_RRTVFTRAI_					0	0	0		ENSG00000162415|ENST00000359600|ZSWIM5	ENSG00000162415|ENST00000359600|ZSWIM5	ENSG00000162415|ENST00000359600|ZSWIM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.340087890625	2	560.340907	1118.66726	1.6683	0.00093481	-2.8998	-0.0016249	-1.2316	-0.00069009	560.3391894187363	89.567	3.3537	89.494	86.948	90.302	-0.07238					131	78	3	0	0	0	0.76255	1	9390	9390		35.618	3.6634	1	1075700			51364	5686	34345	34358	58037	58037					0.11267337965318802
RRTVGPLIIG	10	Unmodified	_RRTVGPLIIG_					0	0	0			REV__nc|ENSG00000060982|P54687-2|BCAT1	REV__nc|ENSG00000060982|P54687-2|BCAT1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.3461303710938	2	541.345658	1080.67676	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.762	1	24.776	24.276	25.276	0.013996								0	0	0	0.45132	1	863	863		26.693	9.3279	1		+		51365	16453	34346	34359	58038	58038					0.139651062508392
RRTVRAKGEPR	11	Unmodified	_RRTVRAKGEPR_					0	0	0		ENST00000392627.5_1_17:72427778-72427970:+|nuORF	ENST00000392627.5_1_17:72427778-72427970:+|nuORF	ENST00000392627.5_1_17:72427778-72427970:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.5992431640625	3	442.600609	1324.78	0.94149	0.00041671	-3.4397	-0.0015224	-2.4982	-0.0011057	442.59892389076134	48.942	1.6202	48.942	48.276	49.896	0.00016785					103	36	4	0	0	0	0.49623	2	4084	4074;4084		52.167	13.414	1	343460			51366	11030	34347	34360	58039;58040	58040					0.13059986691337144
RRTVRAKGEPR	11	Unmodified	_RRTVRAKGEPR_					0	0	0		ENST00000392627.5_1_17:72427778-72427970:+|nuORF	ENST00000392627.5_1_17:72427778-72427970:+|nuORF	ENST00000392627.5_1_17:72427778-72427970:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	442.600609	1324.78	-1.4733	-0.00065209	-0.89826	-0.00039757	-2.3716	-0.0010497	442.60005033478916	48.905	1.9422	48.931	48.239	50.181	0.025574	-0.014977	0.001325	NaN	52.167	112	49	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	247950			51367	11030	34347	34360							0.13059986691337144
RRVAEPAP	8	Unmodified	_RRVAEPAP_					0	0	0			REV__ENST00000261435.10_2_4:40058580-40075094:+|nuORF	REV__ENST00000261435.10_2_4:40058580-40075094:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.2582092285156	2	448.259051	894.503549	-1.7582	-0.00078811	1.7759	0.00079607	0.017763	7.9625E-06	448.25978188065824	87.197	0.95171	87.362	86.868	87.819	0.16473					45	21	3	0	0	0	0.84341	1	8551	8551		24.203	0	1	207410	+		51368	24389	34348	34361	58041	58041					0.05207740194418875
RRVAEPAP	8	Unmodified	_RRVAEPAP_					0	0	0			REV__ENST00000261435.10_2_4:40058580-40075094:+|nuORF	REV__ENST00000261435.10_2_4:40058580-40075094:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.2584228515625	2	448.259051	894.503549	-1.7824	-0.000799	1.7883	0.00080162	0.0058491	2.6219E-06	448.2597133351224	89.882	2.6909	90.057	88.956	91.647	0.17579					189	63	5	0	0	0	0.82464	1	8982	8982		21.702	3.3779	1	2344600	+		51369	24389	34348	34361	58042	58042					0.05207740194418875
RRVANASVDLI	11	Unmodified	_RRVANASVDLI_					0	0	0			REV__nc|ENSG00000132535|P78352-3|DLG4	REV__nc|ENSG00000132535|P78352-3|DLG4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.236572265625	3	405.238566	1212.69387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.48	1	63.447	62.947	63.947	-0.033714								0	0	0	0.56276	1	6024	6024		22.562	0.78116	1		+		51370	19010	34349	34362	58043	58043					0.09602982065985088
RRVELNTT	8	Unmodified	_RRVELNTT_					0	0	0		ENST00000589680.5_1_19:44598638-44600534:+|nuORF	ENST00000589680.5_1_19:44598638-44600534:+|nuORF	ENST00000589680.5_1_19:44598638-44600534:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.780029296875	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.87479	1	8532	8532		30.504	1.3541	1	569520			51371	14244	34350	34363	58044	58044					0.051870905319901794
RRVEPTVT	8	Unmodified	_RRVEPTVT_					0	0	0		nc|ENSG00000179344|P01920|HLA-DQB1;ENSG00000179344|ENST00000434651|HLA-DQB1	nc|ENSG00000179344|P01920|HLA-DQB1	nc|ENSG00000179344|P01920|HLA-DQB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.279052734375	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.86791	1	7519	7519		28.254	0.37203	1	1311100			51372	15126	34351	34364	58045	58045					0.06031992020336929
RRVEQDARRP	10	Unmodified	_RRVEQDARRP_					0	0	0			REV__nc|ENSG00000222009|C9JJ37-2|BTBD19	REV__nc|ENSG00000222009|C9JJ37-2|BTBD19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3648071289062	2	641.857983	1281.70141	7.1333	0.0045786	0.022063	1.4161E-05	7.1554	0.0045927	642.3587393557684	111.56	0.41818	111.6	111.28	111.7	0.032707					29	15	2	0	0	0	0.86218	1	13503	13503		32.812	0	1	6618000	+		51373	30207	34352	34365	58046	58046					0.07183134386241363
RRVGLKKK	8	Unmodified	_RRVGLKKK_					0	0	0			REV__ENST00000544844.5_1_11:64085187-64085430:-|nuORF	REV__ENST00000544844.5_1_11:64085187-64085430:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.8428649902344	2	492.843085	983.671617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.81	1	116.9	116.4	117.4	0.090004								0	0	0	0.31173	1	12391	12391		8.8223	4.5061	1		+		51374	28517	34353	34366	58047	58047					0.1791284717888857
RRVILAHPTG	10	Unmodified	_RRVILAHPTG_					0	0	0			REV__ENST00000466855.1_1_7:150774601-150775027:-|nuORF	REV__ENST00000466855.1_1_7:150774601-150775027:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3408813476562	2	560.340907	1118.66726	3.1454	0.0017625	-4.1604	-0.0023312	-1.015	-0.00056875	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.85466	2	12849	12849;12932		20.947	2.6225	1	151040	+		51375	21127	34354	34367	58048;58049	58048					0.11267337965318802
RRVIVSSN	8	Unmodified	_RRVIVSSN_					0	0	0			REV__nc|ENSG00000122257|Q7Z6E9-2|RBBP6	REV__nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7773742675781	2	465.777608	929.540663	-0.11871	-5.5291E-05	0.041983	1.9555E-05	-0.076723	-3.5736E-05	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.84341	1	7961	7961		24.203	0	1	1083800	+		51376	18486	34355	34368	58050	58050					0.07307411740191583
RRVKHSTCAL	10	Unmodified	_RRVKHSTCAL_					0	0	0			REV__ENSG00000278053|ENST00000617633|DDX52	REV__ENSG00000278053|ENST00000617633|DDX52	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.8299560546875	2	585.829849	1169.64514	-0.92321	-0.00054084	1.7916	0.0010496	0.86844	0.00050876	585.8307293050794	57.888	1.4017	57.888	57.479	58.881	0					105	56	3	0	0	0	0.86718	1	5025	5025		27.882	1.1893	1	164040	+		51377	24030	34356	34369	58051	58051					0.06710790225247365
RRVLAGQVRG	10	Unmodified	_RRVLAGQVRG_					0	0	0			REV__ENSG00000237172|ENST00000449549|B3GNT9	REV__ENSG00000237172|ENST00000449549|B3GNT9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.8474731445312	2	556.343981	1110.67341	0.14884	8.2805E-05	2.2441	0.0012485	2.3929	0.0013313	556.3451362150047	17.953	0.56242	17.332	17.023	17.585	-0.62141					24	13	2	0	0	0	0.8608	1	313	313		34.173	6.2903	1	371980	+		51378	23794	34357	34370	58052	58052					0.12249856196854125
RRVLHPSPV	9	Unmodified	_RRVLHPSPV_					0	0	0		nc|ENSG00000160224|O43918-4|AIRE	nc|ENSG00000160224|O43918-4|AIRE	nc|ENSG00000160224|O43918-4|AIRE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.8207397460938	2	530.82235	1059.63015	-0.034444	-1.8284E-05	-2.5582	-0.0013579	-2.5926	-0.0013762	530.8208487478996	82.524	1.2472	82.59	82.132	83.379	0.065918					77	28	4	0	0	0	0.7932	1	8133	8133		24.203	5.8783	1	1479900			51379	15036	34358	34371	58053	58053					0.10271666419566827
RRVLHPSPV	9	Unmodified	_RRVLHPSPV_					0	0	0		nc|ENSG00000160224|O43918-4|AIRE	nc|ENSG00000160224|O43918-4|AIRE	nc|ENSG00000160224|O43918-4|AIRE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.8207397460938	2	530.82235	1059.63015	0.64608	0.00034295	-3.4841	-0.0018494	-2.838	-0.0015065	530.820506018963	80.205	1.3856	80.261	79.781	81.166	0.055916					85	34	3	0	0	0	0.78058	1	7998	7998		30.504	0.6621	1	627060			51380	15036	34358	34371	58054	58054					0.10271666419566827
RRVLVLMASKH	11	Unmodified	_RRVLVLMASKH_					0	0	0		nc|ENSG00000100796|Q6IN85-5|PPP4R3A;nc|ENSG00000100796|Q6IN85-4|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;ENSG00000100796|ENST00000554943|PPP4R3A	nc|ENSG00000100796|Q6IN85-5|PPP4R3A	nc|ENSG00000100796|Q6IN85-5|PPP4R3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.267822265625	3	437.267691	1308.78124	-0.7643	-0.0003342	1.128	0.00049324	0.3637	0.00015903	437.2680989446087	50.458	1.6052	50.435	49.633	51.238	-0.02343					188	43	5	0	0	0	0.72374	1	4374	4374		27.644	0.59661	1	2919200			51381	1870	34359	34372	58055	58055					0.13920484735899663
RRVLVLMASKH	11	Unmodified	_RRVLVLMASKH_					0	0	0		nc|ENSG00000100796|Q6IN85-5|PPP4R3A;nc|ENSG00000100796|Q6IN85-4|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;ENSG00000100796|ENST00000554943|PPP4R3A	nc|ENSG00000100796|Q6IN85-5|PPP4R3A	nc|ENSG00000100796|Q6IN85-5|PPP4R3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26788330078125	3	437.267691	1308.78124	1.2133	0.00053055	-0.84014	-0.00036736	0.37319	0.00016318	437.2672396896614	50.554	1.7579	50.562	49.504	51.262	0.0077477					187	47	5	0	0	0	0.71207	1	4269	4269		29.551	3.4874	1	3327600			51382	1870	34359	34372	58056	58056					0.13920484735899663
RRVLVLMASKH	11	Unmodified	_RRVLVLMASKH_					0	0	0		nc|ENSG00000100796|Q6IN85-5|PPP4R3A;nc|ENSG00000100796|Q6IN85-4|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;ENSG00000100796|ENST00000554943|PPP4R3A	nc|ENSG00000100796|Q6IN85-5|PPP4R3A	nc|ENSG00000100796|Q6IN85-5|PPP4R3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2679443359375	3	437.267691	1308.78124	-1.575	-0.00068869	2.0109	0.00087928	0.43587	0.00019059	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.72374	2	4022	4022;4045		27.644	6.8068	1	3429700			51383	1870	34359	34372	58057;58058	58057					0.13920484735899663
RRVLVLMASKH	11	Unmodified	_RRVLVLMASKH_					0	0	0		nc|ENSG00000100796|Q6IN85-5|PPP4R3A;nc|ENSG00000100796|Q6IN85-4|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;ENSG00000100796|ENST00000554943|PPP4R3A	nc|ENSG00000100796|Q6IN85-5|PPP4R3A	nc|ENSG00000100796|Q6IN85-5|PPP4R3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26788330078125	3	437.267691	1308.78124	0.28665	0.00012534	0.15799	6.9084E-05	0.44464	0.00019442	437.2676689275105	50.631	1.3868	50.681	50.015	51.402	0.049896					192	41	5	0	0	0	0.72892	2	3953	3953;3972		26.75	2.5179	1	2963500			51384	1870	34359	34372	58059;58060	58059					0.13920484735899663
RRVLVLMASKH	11	Unmodified	_RRVLVLMASKH_					0	0	0		nc|ENSG00000100796|Q6IN85-5|PPP4R3A;nc|ENSG00000100796|Q6IN85-4|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;ENSG00000100796|ENST00000554943|PPP4R3A	nc|ENSG00000100796|Q6IN85-5|PPP4R3A	nc|ENSG00000100796|Q6IN85-5|PPP4R3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26776123046875	3	437.267691	1308.78124	0.02954	1.2917E-05	0.26128	0.00011425	0.29082	0.00012717	437.26770833059527	48.1	1.3181	49.023	48.466	49.784	0.92315					115	32	4	0	0	0	0.72374	1	4633	4633		27.644	0.59661	1	3276900			51385	1870	34359	34372	58061	58061					0.13920484735899663
RRVPAPSSI	9	Unmodified	_RRVPAPSSI_					0	0	0		ENST00000467497.6_1_9:3855970-4118001:-|nuORF;nc|ENSG00000107249|Q8NEA6|GLIS3;ENSG00000107249|ENST00000381971|GLIS3	ENST00000467497.6_1_9:3855970-4118001:-|nuORF	ENST00000467497.6_1_9:3855970-4118001:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79638671875	2	491.793258	981.571963	0.72275	0.00035544	4.2539	0.002092	4.9766	0.0024475	491.79524952616435	50.532	2.1367	51.283	50.465	52.601	0.75174					133	51	3	0	0	0	0.77244	1	5038	5038		32.812	4.9302	1	1359500			51386	2337	34360	34373	58062	58062					0.08043984774269575
RRVPEVTG	8	Unmodified	_RRVPEVTG_					0	0	0		ENST00000471661.5_1_2:96455422-96457958:+|nuORF;ENST00000359548.8_1_2:96698116-96700654:-|nuORF;nc|ENSG00000183169|Q3SYA9|POM121L1P	ENST00000471661.5_1_2:96455422-96457958:+|nuORF	ENST00000471661.5_1_2:96455422-96457958:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2623596191406	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.85277	1	7545	7545		25.45	0	1	2957200			51387	10429	34361	34374	58063	58063					0.05435722848858404
RRVPINLC	8	Unmodified	_RRVPINLC_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.78607177734375	2	485.784379	969.554204	-0.85605	-0.00041586	4.4129	0.0021437	3.5569	0.0017279	485.7862827659192	15.717	0.35344	15.765	15.634	15.987	0.047803					21	13	2	0	0	0	0.86791	1	68	68		28.254	5.2118	1	56329	+		51388	29671	34362	34375	58064	58064					0.0682094624776255
RRVTALPRRE	10	Unmodified	_RRVTALPRRE_					0	0	0			REV__ENST00000361479.9_1_13:20208000-20208090:+|nuORF	REV__ENST00000361479.9_1_13:20208000-20208090:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3840942382812	2	627.381094	1252.74764	6.5804	0.0041284	-4.2374	-0.0026585	2.343	0.00147	627.3785016354675	112.85	0.36639	112.87	112.77	113.14	0.01696					21	13	2	0	0	0	0.85958	1	13684	13684		15.642	1.5047	1	54970	+		51389	25500	34363	34376	58065	58065					0.1313719928834871
RRWDNIVGKP	10	Unmodified	_RRWDNIVGKP_					0	0	0			REV__ENSG00000136940|ENST00000259467|PDCL	REV__ENSG00000136940|ENST00000259467|PDCL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2670593261719	3	414.235156	1239.68364	0.97582	0.00040422	-1.7247	-0.00071442	-0.74884	-0.0003102	414.23425663579025	39.815	0.64612	39.824	39.428	40.074	0.0092773					22	14	2	0	0	0	0.37624	1	2779	2779		31.634	15.714	1	65905	+		51390	19352	34364	34377	58066	58066					0.07338419131406226
RRWERRGRKKR	11	Unmodified	_RRWERRGRKKR_					0	0	0			REV__ENST00000486943.1_3_X:49065690-49065852:-|nuORF	REV__ENST00000486943.1_3_X:49065690-49065852:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.6583251953125	3	528.657452	1582.95053	0.35209	0.00018614	0.98871	0.00052269	1.3408	0.00070882	528.6579756700202	26.729	1.292	26.554	26.205	27.497	-0.17559					69	28	4	0	0	0	0.89497	1	1494	1494		3.026	1.3907	1	328910	+		51391	27562	34365	34378	58067	58067					0.18236942133466982
RRWLQLWRRPR	11	Unmodified	_RRWLQLWRRPR_					0	0	0			REV__ENSG00000185215|ENST00000560869|TNFAIP2	REV__ENSG00000185215|ENST00000560869|TNFAIP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7852478027344	4	406.49583	1621.95422	1.6793	0.00068262	4.0153	0.0016322	5.6946	0.0023148	406.74891257011666	33.876	0.12497	34.046	33.984	34.109	0.16971					4	2	2	0	0	0	0.18304	1	2474	2474		3.4087	0.38274	1	24234	+		51392	22745	34366	34379	58068	58068					0.16811611907314727
RRWNLKKWRR	10	Unmodified	_RRWNLKKWRR_					0	0	0			REV__ENST00000550078.2_2_1:203816644-203816719:+|nuORF	REV__ENST00000550078.2_2_1:203816644-203816719:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.3060302734375	3	500.304127	1497.89055	0.43261	0.00021644	3.7737	0.001888	4.2063	0.0021044	500.3060463887944	16.64	0.93214	16.029	15.82	16.752	-0.6107					30	20	3	0	0	0	0.8573	1	165	165		16.007	2.4988	1	2118800	+		51393	28592	34367	34380	58069	58069					0.16152251470248302
RRWQHRYWREV	11	Unmodified	_RRWQHRYWREV_					0	0	0		ENST00000570069.5_1_16:1826945-1827407:+|nuORF;ENST00000561903.6_1_16:1826945-1828699:+|nuORF	ENST00000570069.5_1_16:1826945-1827407:+|nuORF	ENST00000570069.5_1_16:1826945-1827407:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.2947387695312	3	557.96243	1670.86546	0.096108	5.3624E-05	-3.3532	-0.001871	-3.2571	-0.0018174	557.9605686448617	17.508	0.49417	17.584	17.372	17.867	0.075443					59	19	5	0	0	0	0.85439	2	198	183;198		5.6988	2.4875	1	477090			51394	13841	34368	34381	58070;58071	58071					0.0568615187701198
RRWQHRYWREV	11	Unmodified	_RRWQHRYWREV_					0	0	0		ENST00000570069.5_1_16:1826945-1827407:+|nuORF;ENST00000561903.6_1_16:1826945-1828699:+|nuORF	ENST00000570069.5_1_16:1826945-1827407:+|nuORF	ENST00000570069.5_1_16:1826945-1827407:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.9608154296875	3	557.96243	1670.86546	0.090182	5.0318E-05	-3.2968	-0.0018395	-3.2066	-0.0017891	557.9606132565953	17.734	0.62333	17.658	17.423	18.046	-0.07671					69	24	4	0	0	0	0.89215	1	242	242		3.2113	1.7926	1	436250			51395	13841	34368	34381	58072	58072					0.0568615187701198
RRWQHRYWREV	11	Unmodified	_RRWQHRYWREV_					0	0	0		ENST00000570069.5_1_16:1826945-1827407:+|nuORF;ENST00000561903.6_1_16:1826945-1828699:+|nuORF	ENST00000570069.5_1_16:1826945-1827407:+|nuORF	ENST00000570069.5_1_16:1826945-1827407:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.2943115234375	3	557.96243	1670.86546	1.1029	0.0006154	-4.447	-0.0024813	-3.3441	-0.0018659	557.95999746798	17.762	0.59109	17.683	17.479	18.07	-0.078943					65	25	4	0	0	0	0.7896	3	258	246;258;272		13.508	10.297	1	448590			51396	13841	34368	34381	58073;58074;58075	58074					0.0568615187701198
RRWQHRYWREV	11	Unmodified	_RRWQHRYWREV_					0	0	0		ENST00000570069.5_1_16:1826945-1827407:+|nuORF;ENST00000561903.6_1_16:1826945-1828699:+|nuORF	ENST00000570069.5_1_16:1826945-1827407:+|nuORF	ENST00000570069.5_1_16:1826945-1827407:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	557.96243	1670.86546	0.21285	0.00011876	-3.2432	-0.0018096	-3.0304	-0.0016908	557.9605800344092	17.612	0.37273	17.658	17.484	17.857	0.0457	0.018108	0.00031646	NaN	13.508	61	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	588450			51397	13841	34368	34381							0.0568615187701198
RRWQHRYWREV	11	Unmodified	_RRWQHRYWREV_					0	0	0		ENST00000570069.5_1_16:1826945-1827407:+|nuORF;ENST00000561903.6_1_16:1826945-1828699:+|nuORF	ENST00000570069.5_1_16:1826945-1827407:+|nuORF	ENST00000570069.5_1_16:1826945-1827407:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	557.96243	1670.86546	0.95958	0.00053541	-4.1669	-0.0023249	-3.2073	-0.0017895	557.9600484642226	17.575	0.30301	17.551	17.378	17.681	-0.024035	-0.088746	-0.0012296	NaN	13.508	48	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	808920			51398	13841	34368	34381							0.0568615187701198
RRWRQRRRWPY	11	Unmodified	_RRWRQRRRWPY_					0	0	0			REV__ENST00000372724.5_1_10:76586363-76598485:+|nuORF	REV__ENST00000372724.5_1_10:76586363-76598485:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.2628784179688	3	572.657452	1714.95053	-0.87411	-0.00050056	-2.7385	-0.0015682	-3.6126	-0.0020688	572.99161520565	56.803	0.25579	57.2	57.116	57.371	0.39672					6	5	2	0	0	0	0.18191	1	5867	5867		10.104	6.8926	1	171070	+		51399	25727	34369	34382	58076	58076					0.1216494213349506
RRWVPLIQLSP	11	Unmodified	_RRWVPLIQLSP_					0	0	0		ENST00000538795.1_1:150521930-150522471:+|nuORF	ENST00000538795.1_1:150521930-150522471:+|nuORF	ENST00000538795.1_1:150521930-150522471:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6090087890625	3	455.610223	1363.80884	-0.22489	-0.00010246	-3.6902	-0.0016813	-3.9151	-0.0017838	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.76251	1	7362	7362		19.263	1.4295	1	1863900			51400	13470	34370	34383	58077	58077					0.14148711267807812
RRWWPLLLGL	10	Unmodified	_RRWWPLLLGL_					0	0	0			REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.6023864746094	3	437.267909	1308.7819	-0.040503	-1.7711E-05	-0.079599	-3.4806E-05	-0.1201	-5.2517E-05	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.86047	1	4364	4364		23.523	5.6896	1	2735300	+		51401	25803	34371	34384	58078	58078					0.13985647447270821
RRWWPLLLGL	10	Unmodified	_RRWWPLLLGL_					0	0	0			REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26776123046875	3	437.267909	1308.7819	-0.73822	-0.0003228	0.63787	0.00027892	-0.10035	-4.3878E-05	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.86047	1	4576	4576		23.523	4.26	1	3639500	+		51402	25803	34371	34384	58079	58079					0.13985647447270821
RRWWPLLLGL	10	Unmodified	_RRWWPLLLGL_					0	0	0			REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2678527832031	3	437.267909	1308.7819	1.1681	0.00051075	-1.2795	-0.00055948	-0.11144	-4.8727E-05	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.84816	1	4431	4431		17.468	2.6892	1	4130900	+		51403	25803	34371	34384	58080	58080					0.13985647447270821
RRWWPLLLGL	10	Unmodified	_RRWWPLLLGL_					0	0	0			REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.267822265625	3	437.267909	1308.7819	-1.5729	-0.00068777	1.567	0.00068521	-0.0058427	-2.5548E-06	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.84816	1	4136	4136		17.468	0.93815	1	4358700	+		51404	25803	34371	34384	58081	58081					0.13985647447270821
RRWWPLLLGL	10	Unmodified	_RRWWPLLLGL_					0	0	0			REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2681884765625	3	437.267909	1308.7819	0.28665	0.00012534	-0.33898	-0.00014823	-0.052335	-2.2884E-05	437.2676689275105	50.631	1.3868	50.681	50.015	51.402	0.049896					192	41	5	0	0	0	0.82886	1	4021	4021		37.812	4.7721	1	2963500	+		51405	25803	34371	34384	58082	58082					0.13985647447270821
RRWWPLLLGL	10	Unmodified	_RRWWPLLLGL_					0	0	0			REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2677307128906	3	437.267909	1308.7819	-0.49223	-0.00021524	0.44861	0.00019616	-0.043619	-1.9073E-05	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.84816	1	4088	4088		17.468	0.75062	1	3262400	+		51406	25803	34371	34384	58083	58083					0.13985647447270821
RRWWPLLLGL	10	Unmodified	_RRWWPLLLGL_					0	0	0			REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2676696777344	3	437.267909	1308.7819	-0.13248	-5.7929E-05	-0.23034	-0.00010072	-0.36282	-0.00015865	437.26771661657114	51.155	1.5796	51.59	50.873	52.452	0.43505					109	37	4	0	0	0	0.85834	1	5057	5057		22.58	1.5474	1	2614800	+		51407	25803	34371	34384	58084	58084					0.13985647447270821
RRYAGAAG	8	Unmodified	_RRYAGAAG_					0	0	0		ENST00000336138.3_1_8:143808682-143808889:+|nuORF	ENST00000336138.3_1_8:143808682-143808889:+|nuORF	ENST00000336138.3_1_8:143808682-143808889:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	411.2190856933594	2	411.222469	820.430384	0.94508	0.00038864	-4.3321	-0.0017814	-3.387	-0.0013928	411.2196388652758	87.306	2.4467	87.232	85.148	87.595	-0.074005					79	56	3	0	0	0	0.82464	1	9013	9013		21.702	1.2205	1	231570			51408	10167	34372	34385	58085	58085					0.012986114718046338
RRYFKLRGR	9	Unmodified	_RRYFKLRGR_					0	0	0		nc|ENSG00000077044|Q16760-2|DGKD;ENSG00000077044|ENST00000264057|DGKD;ENST00000489613.1_1_2:234294779-234297133:+|nuORF	nc|ENSG00000077044|Q16760-2|DGKD	nc|ENSG00000077044|Q16760-2|DGKD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3800659179688	2	626.380897	1250.74724	-0.052521	-3.2898E-05	-2.1352	-0.0013374	-2.1877	-0.0013703	626.37954025277	107.79	0.47346	107.79	107.4	107.87	0					35	11	4	0	0	0	0.7932	1	11219	11219		24.203	3.3656	1	13895000			51409	1370	34373	34386	58086	58086					0.13189824359142222
RRYKLQKQ	8	Unmodified	_RRYKLQKQ_					0	0	0		nc|ENSG00000137411|Q5ST30-2|VARS2;ENST00000469358.5_1_6:30889720-30893984:+|nuORF;ENST00000477288.5_1_6:30884740-30893984:+|nuORF;nc|ENSG00000137411|Q5ST30-3|VARS2;ENSG00000137411|ENST00000676266|VARS2;nc|ENSG00000137411|Q5ST30-4|VARS2;ENST00000473916.1_1_6:30891971-30893984:+|nuORF	nc|ENSG00000137411|Q5ST30-2|VARS2	nc|ENSG00000137411|Q5ST30-2|VARS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.341552734375	2	560.340907	1118.66726	-1.1289	-0.00063255	-0.073505	-4.1188E-05	-1.2024	-0.00067374	560.3407299796369	89.624	3.285	89.693	87.185	90.47	0.068703					185	76	4	0	0	0	0.884	1	9025	9025		33.516	0.70317	1	1038600			51410	4197	34374	34387	58087	58087					0.11267337965296065
RRYKLQKQ	8	Unmodified	_RRYKLQKQ_					0	0	0		nc|ENSG00000137411|Q5ST30-2|VARS2;ENST00000469358.5_1_6:30889720-30893984:+|nuORF;ENST00000477288.5_1_6:30884740-30893984:+|nuORF;nc|ENSG00000137411|Q5ST30-3|VARS2;ENSG00000137411|ENST00000676266|VARS2;nc|ENSG00000137411|Q5ST30-4|VARS2;ENST00000473916.1_1_6:30891971-30893984:+|nuORF	nc|ENSG00000137411|Q5ST30-2|VARS2	nc|ENSG00000137411|Q5ST30-2|VARS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3402709960938	2	560.340907	1118.66726	0.37477	0.00021	-1.7233	-0.00096563	-1.3485	-0.00075563	560.3398544470892	89.255	3.3389	89.463	87.161	90.5	0.2073					181	78	4	0	0	0	0.87922	1	8900	8900		31.955	2.7848	1	715790			51411	4197	34374	34387	58088	58088					0.11267337965296065
RRYLTWVI	8	Unmodified	_RRYLTWVI_					0	0	0			REV__chr12:66129113-66129796|29|33.62|0.0|21.68|-|2|TE_info:L2b,L2b_dup67799,L2,LINE,donor,+,66129796,66130326|LLPH,None|3	REV__chr12:66129113-66129796|29|33.62|0.0|21.68|-|2|TE_info:L2b,L2b_dup67799,L2,LINE,donor,+,66129796,66130326|LLPH,None|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8297119140625	2	553.827101	1105.63965	1.198	0.00066348	4.1034	0.0022726	5.3014	0.002936	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.88915	1	9014	9014		35.201	1.0282	1	1689700	+		51412	15553	34375	34388	58089	58089					0.09105434705065818
RRYPGVRRKMD	11	Unmodified	_RRYPGVRRKMD_					0	0	0			REV__nc|ENSG00000103150|O95822-2|MLYCD	REV__nc|ENSG00000103150|O95822-2|MLYCD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2779235839844	3	478.601733	1432.78337	-0.6231	-0.00029821	4.4537	0.0021315	3.8306	0.0018333	478.60400508239985	15.885	0.2322	15.801	15.708	15.94	-0.083363					18	9	3	0	0	0	0.76892	1	80	80		17.833	1.3033	1	138840	+		51413	17391	34376	34389	58090	58090					0.0842891347369914
RRYRDYDDYRS	11	Unmodified	_RRYRDYDDYRS_					0	0	0			REV__ENST00000495785.1_1_1:24298338-24304405:-|nuORF	REV__ENST00000495785.1_1_1:24298338-24304405:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.991943359375	3	522.24656	1563.71785	0.26609	0.00013896	2.4332	0.0012707	2.6993	0.0014097	522.247534496538	52.377	0.41441	52.8	52.723	53.137	0.42348					20	9	3	0	0	0	0.18159	1	5264	5264		17.167	5.2344	1	370560	+		51414	23008	34377	34390	58091	58091					-0.04145829238291299
RRYRFALKR	9	Unmodified	_RRYRFALKR_					0	0	0			REV__nc|ENSG00000064655|O00167-3|EYA2;REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	REV__chr6:133525115-133531209|45|13.67|0.13|6.67|+|ENST00000430974|EYA4,EYA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.926513671875	3	422.594907	1264.76289	-1.8042	-0.00076245	-3.4745	-0.0014683	-5.2787	-0.0022308	422.5932950811883	59.075	0.77283	59.162	58.98	59.753	0.087002					44	25	2	0	0	0	0.7932	1	5058	5058		18.262	1.7322	1	123610	+		51415	15874;16481	34378	34391	58092	58092					0.141101108761859
RSAALKVP	8	Unmodified	_RSAALKVP_					0	0	0		ENST00000344651.4_1_12:121158187-121158331:+|nuORF	ENST00000344651.4_1_12:121158187-121158331:+|nuORF	ENST00000344651.4_1_12:121158187-121158331:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2056884765625	2	421.266345	840.518136	1.0044	0.00042311	-0.65001	-0.00027383	0.35437	0.00014928	421.26591905130977	28.46	0.82453	28.287	27.979	28.803	-0.17336					37	20	3	0	0	0	0.4196	1	1721	1721		10.265	0	1	133000			51416	10294	34379	34392	58093	58093					0.09149812342559471
RSAASLATPLL	11	Unmodified	_RSAASLATPLL_					0	0	0			REV__ENST00000491513.5_1_21:46191294-46199096:-|nuORF	REV__ENST00000491513.5_1_21:46191294-46199096:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.3276977539062	2	550.327131	1098.63971	-0.4914	-0.00027043	0.44675	0.00024586	-0.044654	-2.4574E-05	550.3274966608972	100.46	1.192	100.46	99.887	101.08	0					71	27	3	0	0	0	0.66929	1	10163	10163		36.447	5.9431	1	339490	+		51417	27657	34380	34393	58094	58094					0.09433389914443069
RSACKSTQSLV	11	Unmodified	_RSACKSTQSLV_					0	0	0		ENST00000588027.5_1_19:28284210-28284282:-|nuORF	ENST00000588027.5_1_19:28284210-28284282:-|nuORF	ENST00000588027.5_1_19:28284210-28284282:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8075561523438	2	590.311155	1178.60776	-0.45325	-0.00026756	-2.181	-0.0012875	-2.6343	-0.0015551	590.309789757865	32.515	0.5012	32.526	32.269	32.77	0.010899					34	13	3	0	0	0	0.71207	1	1807	1807		29.551	1.4693	1	121810			51418	14206	34381	34394	58095	58095					0.025596541689765218
RSAEFNCPVDN	11	Unmodified	_RSAEFNCPVDN_					0	0	0			REV__ENSG00000166527|ENST00000299665|CLEC4D	REV__ENSG00000166527|ENST00000299665|CLEC4D	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.9224548339844	3	417.852271	1250.53499	-0.18599	-7.7717E-05	3.8556	0.0016111	3.6696	0.0015333	418.1879219421016	105.8	0.24458	105.78	105.57	105.82	-0.025146					6	5	2	0	0	0	0.17244	1	11440	11440		37.6	22.906	1	23900	+		51419	21301	34382	34395	58096	58096					-0.08026099624453309
RSAEVKYFYFF	11	Unmodified	_RSAEVKYFYFF_					0	0	0		nc|ENSG00000165181|Q5VXU9-3|SHOC1	nc|ENSG00000165181|Q5VXU9-3|SHOC1	nc|ENSG00000165181|Q5VXU9-3|SHOC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.2854309082031	3	486.246839	1455.71869	0.22794	0.00011083	4.3764	0.002128	4.6043	0.0022388	486.2491473040781	60.189	1.2071	60.157	59.077	60.284	-0.031727					49	30	4	0	0	0	0.17586	1	5546	5546		21.78	10.326	1	211350			51420	15066	34383	34396	58097	58097					0.009056171486918174
RSAHLLCFI	9	Unmodified	_RSAHLLCFI_					0	0	0			REV__ENST00000367506.9_1_1:185125904-185126051:-|nuORF	REV__ENST00000367506.9_1_1:185125904-185126051:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2931518554688	2	530.292037	1058.56952	-0.73575	-0.00039016	3.3328	0.0017674	2.5971	0.0013772	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.74721	1	8787	8787		37.159	1.5408	1	1390700	+		51421	25566	34384	34397	58098	58098					0.04257813044955583
RSAHPRLWWRK	11	Unmodified	_RSAHPRLWWRK_					0	0	0		ENST00000452825.7_2_X:53247090-53253989:-|nuORF	ENST00000452825.7_2_X:53247090-53253989:-|nuORF	ENST00000452825.7_2_X:53247090-53253989:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.6171875	3	498.284733	1491.83237	0.32624	0.00016256	-4.4054	-0.0021952	-4.0792	-0.0020326	498.28263458981064	33.289	0.68958	33.256	32.916	33.606	-0.032677					52	31	2	0	0	0	0.7896	1	1615	1615		13.508	0.55046	1	223550			51422	11928	34385	34398	58099	58099					0.10612569824957063
RSAKKGVS	8	Unmodified	_RSAKKGVS_					0	0	0			REV__ENST00000455821.1_1_3:193975097-193975331:+|nuORF	REV__ENST00000455821.1_1_3:193975097-193975331:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.75494384765625	2	416.753601	831.49265	0.44827	0.00018682	3.2079	0.0013369	3.6562	0.0015237	416.75482420878427	69.04	0.8387	69.169	68.79	69.629	0.12838					83	36	3	0	0	0	0.87064	1	6258	6258		29.15	2.4566	1	1117600	+		51423	26949	34386	34399	58100	58100					0.07016337820141416
RSAKPALL	8	Unmodified	_RSAKPALL_					0	0	0		nc|ENSG00000132470|P16144-4|ITGB4;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;ENSG00000132470|ENST00000200181|ITGB4	nc|ENSG00000132470|P16144-4|ITGB4	nc|ENSG00000132470|P16144-4|ITGB4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.302978515625	2	428.27417	854.533787	-0.32022	-0.00013714	3.813	0.001633	3.4928	0.0014959	428.2764106828398	64.614	0.42648	64.58	64.337	64.763	-0.034248					17	10	3	0	0	0	0.4196	1	6192	6192		17.365	5.8539	1	38536			51424	3798	34387	34400	58101	58101					0.1007009885960315
RSAKPALL	8	Unmodified	_RSAKPALL_					0	0	0		nc|ENSG00000132470|P16144-4|ITGB4;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;ENSG00000132470|ENST00000200181|ITGB4	nc|ENSG00000132470|P16144-4|ITGB4	nc|ENSG00000132470|P16144-4|ITGB4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	428.27417	854.533787	-1.0037	-0.00042986	4.6943	0.0020104	3.6906	0.0015806	428.27717429027746	64.166	0.14951	64.196	64.106	64.256	0.030251	-0.19192	0.00028238	NaN	17.365	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71200			51425	3798	34387	34400							0.1007009885960315
RSAKRHYLL	9	Unmodified	_RSAKRHYLL_					0	0	0			REV__chr18:24694142-24694256|34|84.94|0.0|23.02|+|0|TE_info:MER77B,MER77B_dup1087,ERVL,LTR,donor,+,24693993,24694142|None,LINC01915|3	REV__chr18:24694142-24694256|34|84.94|0.0|23.02|+|0|TE_info:MER77B,MER77B_dup1087,ERVL,LTR,donor,+,24693993,24694142|None,LINC01915|3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.8436889648438	2	572.340907	1142.66726	1.327	0.00075947	-2.7167	-0.0015549	-1.3898	-0.00079544	572.33942129023	101.52	0.83997	101.57	101.18	102.02	0.044823					41	19	3	0	0	0	0.20789	1	10928	10928		26.693	0	1	295770	+		51426	15670	34388	34401	58102	58102					0.10163337965332175
RSAKWRPG	8	Unmodified	_RSAKWRPG_					0	0	0		ENST00000552606.1_1_12:82750710-82752155:-|nuORF;ENSG00000133773|ENST00000256151|CCDC59	ENST00000552606.1_1_12:82750710-82752155:-|nuORF	ENST00000552606.1_1_12:82750710-82752155:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.273193359375	2	479.272493	956.530432	2.2912	0.0010981	-1.8257	-0.00087499	0.46557	0.00022314	479.2714500709969	101.78	0.95604	102.04	101.69	102.65	0.26322					54	23	3	0	0	0	0.91977	1	12370	12370		45.952	10.334	1	2783100			51427	3892	34389	34402	58103	58103					0.05042848805612721
RSALLPQASN	10	Unmodified	_RSALLPQASN_					0	0	0		ENSG00000170145|ENST00000304987|SIK2	ENSG00000170145|ENST00000304987|SIK2	ENSG00000170145|ENST00000304987|SIK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7930908203125	2	528.793455	1055.57236	1.0935	0.00057822	-1.1708	-0.00061909	-0.077289	-4.087E-05	528.7928379036528	35.778	2.2829	36.025	35.438	37.721	0.24769					158	56	6	0	0	0	0.24988	1	2786	2786		78.264	6.9681	1	16698000			51428	6562	34390	34403	58104	58104					0.046793597034593404
RSALLWPLG	9	Unmodified	_RSALLWPLG_					0	0	0			REV__nc|ENSG00000151240|Q9Y2E4-2|DIP2C	REV__nc|ENSG00000151240|Q9Y2E4-2|DIP2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7998352050781	2	506.800552	1011.58655	-0.65008	-0.00032946	1.6125	0.00081723	0.96246	0.00048778	506.8012923744614	46.783	1.6998	46.754	45.886	47.586	-0.028782					74	44	2	0	0	0	0.77546	1	3854	3854		31.955	0	1	223510	+		51429	29930	34391	34404	58105	58105					0.08122056922422871
RSALMVFND	9	Unmodified	_RSALMVFND_					0	0	0			REV__nc|ENSG00000075790|Q9UHQ4-2|BCAP29	REV__nc|ENSG00000075790|Q9UHQ4-2|BCAP29	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.9697875976562	2	526.763309	1051.51206	-1.1398	-0.00060041	-1.9443	-0.0010242	-3.0841	-0.0016246	526.7619294135491	38.896	0.56424	38.907	38.537	39.101	0.011173					24	12	3	0	0	0	0.20789	1	2654	2654		26.693	1.1189	1	81409	+		51430	29711	34392	34405	58106	58106					-0.011630739512838772
RSALMVFND	9	Unmodified	_RSALMVFND_					0	0	0			REV__nc|ENSG00000075790|Q9UHQ4-2|BCAP29	REV__nc|ENSG00000075790|Q9UHQ4-2|BCAP29	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	526.763309	1051.51206	0.20455	0.00010775	-3.5059	-0.0018468	-3.3014	-0.001739	526.7612867912569	39.089	0.55647	39.059	38.807	39.363	-0.03027	0.10227	-0.00086771	NaN	26.693	22	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72965	+		51431	29711	34392	34405							-0.011630739512838772
RSALMVFND	9	Unmodified	_RSALMVFND_					0	0	0			REV__nc|ENSG00000075790|Q9UHQ4-2|BCAP29	REV__nc|ENSG00000075790|Q9UHQ4-2|BCAP29	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	526.763309	1051.51206	-0.70881	-0.00037337	-2.5367	-0.0013363	-3.2455	-0.0017096	526.7617994366138	38.95	0.55375	38.903	38.647	39.2	-0.047005	-0.053203	0.00015338	NaN	26.693	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78448	+		51432	29711	34392	34405							-0.011630739512838772
RSALRILALT	10	Unmodified	_RSALRILALT_					0	0	0		ENST00000398958.6_1_1:28832464-28856398:+|nuORF;ENST00000434290.5_1_1:28832593-28843241:+|nuORF;ENST00000413987.1_1_1:28832593-28835482:+|nuORF;ENST00000437681.1_1_1:28834633-28835482:+|nuORF;ENST00000373833.10_1_1:28832593-28856394:+|nuORF	ENST00000398958.6_1_1:28832464-28856398:+|nuORF	ENST00000398958.6_1_1:28832464-28856398:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.8474731445312	2	557.358765	1112.70298	0.16128	8.989E-05	-2.9156	-0.001625	-2.7543	-0.0015351	557.3557354882917	17.867	0.16414	17.246	17.101	17.265	-0.62141					6	4	2	0	0	0	0.37624	1	313	313		9.1829	0	1	38665			51433	11195	34393	34406	58107	58107					0.151133754222883
RSALWLLAP	9	Unmodified	_RSALWLLAP_					0	0	0		nc|ENSG00000132535|P78352-2|DLG4	nc|ENSG00000132535|P78352-2|DLG4	nc|ENSG00000132535|P78352-2|DLG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.808837890625	2	513.808377	1025.6022	-0.26337	-0.00013532	1.4503	0.00074519	1.187	0.00060987	513.8089696081398	52.202	2.125	52.215	51.482	53.607	0.012436					136	54	4	0	0	0	0.7932	1	4444	4444		19.36	2.8868	1	732880			51434	14923	34394	34407	58108	58108					0.0904234343945518
RSAPGGIRETR	11	Unmodified	_RSAPGGIRETR_					0	0	0		ENSG00000089693|ENST00000203630|MLF2	ENSG00000089693|ENST00000203630|MLF2	ENSG00000089693|ENST00000203630|MLF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.55877685546875	3	400.558299	1198.65307	0.91168	0.00036518	-0.37978	-0.00015213	0.5319	0.00021306	400.5580759097414	19.227	0.64959	19.301	19.049	19.698	0.073463					57	20	4	0	0	0	0.70584	1	365	365		46.955	20.205	1	362530			51435	1631	34395	34408	58109	58109					0.061686407463639625
RSARCRRGSGH	11	Unmodified	_RSARCRRGSGH_					0	0	0		ENST00000361389.8_1_14:77787419-77788944:+|nuORF	ENST00000361389.8_1_14:77787419-77788944:+|nuORF	ENST00000361389.8_1_14:77787419-77788944:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.9056091308594	3	414.883011	1241.6272	-0.15154	-6.2871E-05	4.0857	0.0016951	3.9341	0.0016322	414.8848111460594	31.162	1.1847	31.242	30.501	31.686	0.079834					36	26	2	0	0	0	0.17396	1	2098	2098		25.892	0	1	52795			51436	10474	34396	34409	58110	58110					0.0160546802310364
RSARRKRKKHR	11	Unmodified	_RSARRKRKKHR_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.6489562988281	3	493.650297	1477.92906	-0.87643	-0.00043265	-0.41632	-0.00020552	-1.2928	-0.00063817	493.64998188310005	44.669	3.6346	44.636	43.623	47.257	-0.033474					240	86	4	0	0	0	0.82431	1	3558	3558		7.6794	1.6784	1	495450			51437	3243	34397	34410	58111	58111					0.20921557104770727
RSARRKRKKHR	11	Unmodified	_RSARRKRKKHR_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.64886474609375	3	493.650297	1477.92906	-0.69439	-0.00034278	-0.55184	-0.00027242	-1.2462	-0.0006152	493.64986615428916	44.451	1.6231	44.46	43.725	45.348	0.0084534					108	38	3	0	0	0	0.81892	1	3153	3153		8.0344	1.7135	1	353910			51438	3243	34397	34410	58112	58112					0.20921557104770727
RSARRKRKKHR	11	Unmodified	_RSARRKRKKHR_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.65179443359375	3	493.650297	1477.92906	0.28936	0.00014284	-1.5748	-0.00077741	-1.2855	-0.00063457	493.6493656295497	44.418	1.6555	44.467	43.631	45.286	0.048996					106	39	4	0	0	0	0.82431	1	3064	3064		7.6794	1.3585	1	509790			51439	3243	34397	34410	58113	58113					0.20921557104770727
RSASSATQVHK	11	Unmodified	_RSASSATQVHK_					0	0	0		ENST00000361272.8_2_8:17102747-17104366:-|nuORF	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	ENST00000361272.8_2_8:17102747-17104366:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.3126831054688	2	586.312543	1170.61053	-0.21677	-0.00012709	0.22396	0.00013131	0.0071876	4.2142E-06	586.3126056447086	16.47	0.3677	15.983	15.821	16.189	-0.48718					15	7	3	0	0	0	0.47591	1	131	131		53.597	0.66017	1	575130			51440	10470	34398	34411	58114	58114					0.032052456181418165
RSATLVGF	8	Unmodified	_RSATLVGF_					0	0	0		ENSG00000117479|ENST00000236137|SLC19A2	ENSG00000117479|ENST00000236137|SLC19A2	ENSG00000117479|ENST00000236137|SLC19A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.77484130859375	2	425.742702	849.470852	-0.26195	-0.00011152	-1.4629	-0.00062281	-1.7248	-0.00073434	425.7433542475217	38.493	0.65465	38.835	38.577	39.232	0.34187					21	15	2	0	0	0	0.4196	1	3187	3187		35.618	18.253	1	39576			51441	2981	34399	34412	58115	58115					0.04009533071575788
RSAVHWRL	8	Unmodified	_RSAVHWRL_					0	0	0			REV__nc|ENSG00000163638|Q9P2N4-2|ADAMTS9	REV__nc|ENSG00000163638|Q9P2N4-2|ADAMTS9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.24951171875	2	512.793592	1023.57263	0.23247	0.00011921	2.7747	0.0014229	3.0072	0.0015421	512.7950205839213	70.772	0.60826	71.319	70.966	71.574	0.54756					25	14	2	0	0	0	0.4196	1	7901	7901		15.642	0	1	291690	+		51442	20952	34400	34413	58116	58116					0.06178824213975531
RSAVQESTGGK	11	Unmodified	_RSAVQESTGGK_					0	0	0		ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	ENSG00000091138|ENST00000340010|SLC26A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8250732421875	2	560.291276	1118.568	0.81543	0.00045688	2.5371	0.0014215	3.3526	0.0018784	560.2925788585015	50.804	0.37274	51.239	51.036	51.409	0.43505					14	8	2	0	0	0	0.16123	1	5010	5010		45.022	7.2107	1	169370			51443	1670	34401	34414	58117	58117					0.013458504899062973
RSAYNEPLTP	10	Unmodified	_RSAYNEPLTP_					0	0	0		ENSG00000171735|ENST00000303635|CAMTA1	ENSG00000171735|ENST00000303635|CAMTA1	ENSG00000171735|ENST00000303635|CAMTA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.2902221679688	2	574.290745	1146.56694	0.047433	2.724E-05	-0.94092	-0.00054036	-0.89348	-0.00051312	574.290096159111	16.286	0.35611	15.799	15.65	16.006	-0.48718					16	7	3	0	0	0	0.44803	1	107	107		60.118	5.3419	1	550880			51444	6703	34402	34415	58118	58118					-0.00048363879000135057
RSAYQEAM	8	Unmodified	_RSAYQEAM_					0	0	0		nc|ENSG00000175793|P31947-2|SFN;ENSG00000175793|ENST00000339276|SFN	nc|ENSG00000175793|P31947-2|SFN	nc|ENSG00000175793|P31947-2|SFN	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.2178039550781	2	478.218734	954.422915	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.496	1	31.604	31.104	32.104	0.10707								0	0	0	0.30457	1	2153	2153		50.025	0.58299	1				51445	7036	34403	34416	58119	58119					-0.056119089107937725
RSCDGGLR	8	Unmodified	_RSCDGGLR_					0	0	0			REV__ENST00000256495.3_1_3:5025622-5025691:+|nuORF	REV__ENST00000256495.3_1_3:5025622-5025691:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	431.30523681640625	2	432.211244	862.407934	0.51355	0.00022196	0.61783	0.00026703	1.1314	0.000489	432.21145915453866	76.552	1.0177	76.687	75.762	76.78	0.13478					48	31	2	0	0	0	0.4196	1	7175	7175		30.504	0	1	78190	+		51446	24326	34404	34417	58120	58120					-0.028773559881187794
RSCFDSEH	8	Unmodified	_RSCFDSEH_					0	0	0		ENST00000367142.4_1_1:205698746-205719177:-|nuORF	ENST00000367142.4_1_1:205698746-205719177:-|nuORF	ENST00000367142.4_1_1:205698746-205719177:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.71356201171875	2	490.698166	979.381779	0.44734	0.00021951	-1.1548	-0.00056667	-0.70748	-0.00034716	490.6972022844112	95.91	0.32457	96.315	96.175	96.499	0.40451					9	7	2	0	0	0	0.4196	1	11551	11551		38.806	16.846	1	48996			51447	10535	34405	34418	58121	58121					-0.10873669950262865
RSCLWPCL	8	Unmodified	_RSCLWPCL_					0	0	0			REV__ENSG00000124279|ENST00000264669|FASTKD3	REV__ENSG00000124279|ENST00000264669|FASTKD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.23406982421875	2	489.238415	976.462278	0.49831	0.00024379	-4.0805	-0.0019963	-3.5822	-0.0017526	489.2364393796821	68.162	0.65366	68.29	67.963	68.617	0.12838					40	24	2	0	0	0	0.86288	1	6128	6128		26.796	0.10319	1	129000	+		51448	18577	34406	34419	58122	58122					-0.026894801609387287
RSCPPPWRAR	10	Unmodified	_RSCPPPWRAR_					0	0	0			REV__ENST00000340648.5_1_21:45079492-45079627:+|nuORF	REV__ENST00000340648.5_1_21:45079492-45079627:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	612.3340454101562	2	613.322191	1224.62983	-0.075278	-4.617E-05	-0.92676	-0.0005684	-1.002	-0.00061457	613.8227045274635	54.329	0.33701	54.913	54.79	55.127	0.58474					10	7	2	0	0	0	0.37624	1	5530	5530		31.53	0	1	359810	+		51449	25250	34407	34420	58123	58123					0.026499234280436212
RSCPSAPP	8	Unmodified	_RSCPSAPP_					0	0	0		nc|ENSG00000141736|P04626-6|ERBB2	nc|ENSG00000141736|P04626-6|ERBB2	nc|ENSG00000141736|P04626-6|ERBB2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78533935546875	2	407.697438	813.380322	-0.0928	-3.7834E-05	0.82905	0.000338	0.73625	0.00030017	407.69595051715	34.096	0.59721	34.091	33.737	34.334	-0.0047417					18	13	2	0	0	0	0.4196	1	2052	2052		17.365	2.7009	1	17062			51450	14965	34408	34421	58124	58124					-0.03383259248369086
RSCRVARRL	9	Unmodified	_RSCRVARRL_					0	0	0		ENST00000380995.5_1_22:47570871-47571156:+|nuORF	ENST00000380995.5_1_22:47570871-47571156:+|nuORF	ENST00000380995.5_1_22:47570871-47571156:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8262329101562	2	558.830183	1115.64581	-0.1486	-8.3042E-05	-4.4782	-0.0025026	-4.6268	-0.0025856	558.8274959479605	65.531	0.78168	65.558	65.246	66.027	0.027321					103	42	3	0	0	0	0.7932	1	6224	6224		25.574	3.6142	1	6703400			51451	10941	34409	34422	58125	58125					0.09261629664956672
RSDDLGGLW	9	Unmodified	_RSDDLGGLW_					0	0	0		ENSG00000010932|ENST00000617670|FMO1;nc|ENSG00000010932|Q01740-2|FMO1	ENSG00000010932|ENST00000617670|FMO1	ENSG00000010932|ENST00000617670|FMO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.7508544921875	2	509.751256	1017.48796	-0.72541	-0.00036978	0.041305	2.1055E-05	-0.6841	-0.00034872	509.75104021431855	45.601	0.68941	45.596	45.23	45.92	-0.0041618					27	15	2	0	0	0	0.64555	1	3633	3633		44.377	0	1	312100			51452	775	34410	34423	58126	58126					-0.02008591113269631
RSDFAIVGR	9	Unmodified	_RSDFAIVGR_					0	0	0		ENSG00000127578|ENST00000319070|WFIKKN1	ENSG00000127578|ENST00000319070|WFIKKN1	ENSG00000127578|ENST00000319070|WFIKKN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.78118896484375	2	510.78289	1019.55123	-0.062615	-3.1982E-05	0.15109	7.7173E-05	0.088474	4.5191E-05	510.7827979768825	26.396	0.70906	26.358	26.096	26.805	-0.038523					36	14	3	0	0	0	0.44529	1	1197	1197		54.722	4.6888	1	179820			51453	3508	34411	34424	58127	58127					0.04223394394625757
RSDFAIVGR	9	Unmodified	_RSDFAIVGR_					0	0	0		ENSG00000127578|ENST00000319070|WFIKKN1	ENSG00000127578|ENST00000319070|WFIKKN1	ENSG00000127578|ENST00000319070|WFIKKN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.7816467285156	2	510.78289	1019.55123	0.091613	4.6794E-05	-0.25448	-0.00012998	-0.16286	-8.3188E-05	510.7826138521108	26.501	0.82938	26.469	26.1	26.929	-0.032127					35	17	3	0	0	0	0.54908	1	1143	1143		49.536	7.0616	1	143900			51454	3508	34411	34424	58128	58128					0.04223394394625757
RSDKNKRRTK	10	Unmodified	_RSDKNKRRTK_					0	0	0		nc|ENSG00000176406|Q9UQ26-3|RIMS2;nc|ENSG00000176406|Q9UQ26-1|RIMS2;nc|ENSG00000176406|Q9UQ26-8|RIMS2;nc|ENSG00000176406|Q9UQ26|RIMS2;ENSG00000176406|ENST00000696799|RIMS2;nc|ENSG00000176406|Q9UQ26-2|RIMS2	nc|ENSG00000176406|Q9UQ26-3|RIMS2	nc|ENSG00000176406|Q9UQ26-3|RIMS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.23370361328125	3	430.256731	1287.74836	1.6622	0.00071518	-0.68794	-0.00029599	0.97428	0.00041919	430.25582094133006	23.956	0.50543	23.382	23.136	23.641	-0.57415					15	11	2	0	0	0	0.37624	1	1114	1114		7.6794	0	1	26410			51455	7079	34412	34425	58129	58129					0.11599993937397812
RSDLTPFPV	9	Unmodified	_RSDLTPFPV_					0	0	0			REV__ENST00000511437.5_3_5:10227625-10227700:-|nuORF	REV__ENST00000511437.5_3_5:10227625-10227700:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3014526367188	2	516.279649	1030.54475	0.11583	5.9798E-05	3.1255	0.0016136	3.2413	0.0016734	516.2809177614103	64.082	0.36101	64.048	63.938	64.299	-0.034256					11	9	2	0	0	0	0.20789	1	6129	6129		32.812	12.816	1	56631	+		51456	27970	34413	34426	58130	58130					0.030694564432451443
RSDLTPFPV	9	Unmodified	_RSDLTPFPV_					0	0	0			REV__ENST00000511437.5_3_5:10227625-10227700:-|nuORF	REV__ENST00000511437.5_3_5:10227625-10227700:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	516.279649	1030.54475	-0.70497	-0.00036396	1.8162	0.00093769	1.1113	0.00057373	516.281959820485	63.871	0.12635	63.901	63.819	63.946	0.030243	-0.073368	-5.3691E-05	NaN	32.812	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54525	+		51457	27970	34413	34426							0.030694564432451443
RSDPRRRKKP	10	Unmodified	_RSDPRRRKKP_					0	0	0			REV__nc|ENSG00000005889|P17010-2|ZFX	REV__nc|ENSG00000005889|P17010-2|ZFX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3934326171875	2	648.391993	1294.76943	-1.1411	-0.00073988	1.6995	0.0011019	0.5584	0.00036206	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.8573	1	12586	12586		16.007	1.8697	1	2297700	+		51458	16092	34414	34427	58131	58131					0.13384004036925035
RSDRSIALN	9	Unmodified	_RSDRSIALN_					0	0	0			REV__ENSG00000062822|ENST00000440232|POLD1	REV__ENSG00000062822|ENST00000440232|POLD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3203125	2	516.283254	1030.55196	-0.34678	-0.00017904	2.6581	0.0013723	2.3113	0.0011933	516.2848883403149	45.867	0.40763	46.338	46.049	46.457	0.47139					12	9	2	0	0	0	0.20789	1	4299	4299		27.882	0	1	141220	+		51459	16465	34415	34428	58132	58132					0.03790189043661485
RSDVLVSAPA	10	Unmodified	_RSDVLVSAPA_					0	0	0			REV__nc|ENSG00000006744|Q9BQ52-4|ELAC2	REV__nc|ENSG00000006744|Q9BQ52-4|ELAC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.78192138671875	2	507.782556	1013.55056	-0.57995	-0.00029449	0.58866	0.00029891	0.0087148	4.4252E-06	507.7828241702168	31.555	0.51432	31.635	31.384	31.899	0.079836					17	11	2	0	0	0	0.73395	1	2147	2147		42.864	3.6114	1	155510	+		51460	16112	34416	34429	58133	58133					0.044325549548943854
RSEAAMQEGL	10	Unmodified	_RSEAAMQEGL_					0	0	0			REV__ENSG00000176531|ENST00000292140|PHLDB3	REV__ENSG00000176531|ENST00000292140|PHLDB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2633056640625	2	546.26113	1090.50771	-0.11825	-6.4596E-05	4.0458	0.0022101	3.9275	0.0021455	546.2630116291269	62.579	1.3243	63.134	62.516	63.84	0.55449					82	30	4	0	0	0	0.86106	1	6750	6750		33.922	3.418	1	918870	+		51461	22131	34417	34430	58134	58134					-0.03392583164827556
RSEGSRKAAQ	10	Unmodified	_RSEGSRKAAQ_					0	0	0			REV__ENST00000553164.1_1_12:56708586-56709779:-|nuORF	REV__ENST00000553164.1_1_12:56708586-56709779:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.4934692382812	2	545.291611	1088.56867	-1.1682	-0.00063699	1.5155	0.00082639	0.34734	0.0001894	545.2926263052457	44.158	0.29028	44.608	44.482	44.773	0.45025					10	6	2	0	0	0	0.37624	1	4055	4055		16.717	0	1	176640	+		51462	28641	34418	34431	58135	58135					0.027926899296062402
RSEGTIRASR	10	Unmodified	_RSEGTIRASR_					0	0	0			REV__chr3:188490641-188524665|13|10.69|0.65|4.04|+|2|TE_info:AluSx3,AluSx3_dup6957,Alu,SINE,donor,-,188490399,188490641|None,LPP|3	REV__chr3:188490641-188524665|13|10.69|0.65|4.04|+|2|TE_info:AluSx3,AluSx3_dup6957,Alu,SINE,donor,-,188490399,188490641|None,LPP|3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	566.8090209960938	2	566.81271	1131.61087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.989	1	16.067	15.567	16.567	0.077959								0	0	0	0.45132	1	65	65		31.53	7.3271	1		+		51463	15805	34419	34432	58136	58136					0.050326653379897834
RSEIERLHV	9	Unmodified	_RSEIERLHV_					0	0	0			REV__ENSG00000186193|ENST00000409687|SAPCD2	REV__ENSG00000186193|ENST00000409687|SAPCD2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.8176879882812	2	569.820004	1137.62546	-1.0016	-0.00057072	-3.9985	-0.0022784	-5.0001	-0.0028492	569.8176061903462	58.45	1.0406	58.45	57.91	58.951	0					67	44	2	0	0	0	0.77244	1	5033	5033		32.812	0.85756	1	76918	+		51464	22834	34420	34433	58137	58137					0.06214737486129707
RSEIESLN	8	Unmodified	_RSEIESLN_					0	0	0			REV__ENSG00000080298|ENST00000617270|RFX3	REV__ENSG00000080298|ENST00000617270|RFX3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.27197265625	2	474.243264	946.471974	-0.80254	-0.0003806	2.677	0.0012695	1.8744	0.00088893	474.2463177026492	30.355	0.39819	30.384	30.096	30.495	0.028618					12	8	2	0	0	0	0.4196	1	1973	1973		20.947	0	1	45457	+		51465	16800	34421	34434	58138	58138					-0.0034029735016929408
RSEIPTDPVFT	11	Unmodified	_RSEIPTDPVFT_					0	0	0			REV__ENSG00000110851|ENST00000228437|PRDM4	REV__ENSG00000110851|ENST00000228437|PRDM4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	631.3270874023438	2	631.324785	1260.63502	-0.90412	-0.0005708	1.399	0.00088325	0.49492	0.00031245	631.3255019326185	42.809	1.0449	42.809	42.535	43.58	0					42	25	2	0	0	0	0.45992	1	3009	3009		54.722	19.57	1	130620	+		51466	17835	34422	34435	58139	58139					0.015124609809845424
RSEKVDAE	8	Unmodified	_RSEKVDAE_					0	0	0			REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF	REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.28167724609375	2	467.235439	932.456324	-0.38698	-0.00018081	-0.64777	-0.00030266	-1.0348	-0.00048347	467.23481018684276	21.454	1.0804	20.826	20.494	21.574	-0.62835					33	27	2	0	0	0	0.4196	1	798	798		14.137	0	1	156100	+		51467	17656	34423	34436	58140	58140					-0.012605838672357095
RSELDQPI	8	Unmodified	_RSELDQPI_					0	0	0			REV__ENSG00000153684|ENST00000526619|GOLGA8F	REV__ENSG00000153684|ENST00000526619|GOLGA8F	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.30816650390625	2	479.253631	956.49271	0.2109	0.00010107	-0.36888	-0.00017679	-0.15798	-7.5711E-05	479.25351738718746	45.122	0.56563	45.102	44.879	45.445	-0.020405					16	12	2	0	0	0	0.4196	1	3537	3537		35.618	0	1	68764	+		51468	20353	34424	34437	58141	58141					0.012722930294785328
RSELLRPR	8	Unmodified	_RSELLRPR_					0	0	0		ENST00000239906.9_1_5:137673934-137676915:+|nuORF	ENST00000239906.9_1_5:137673934-137676915:+|nuORF	ENST00000239906.9_1_5:137673934-137676915:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8084106445312	2	513.811982	1025.60941	-1.4445	-0.00074222	-4.4488	-0.0022859	-5.8934	-0.0030281	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.87479	1	3825	3825		30.504	0	1	1675700			51469	9246	34425	34438	58142	58142					0.09763076039894258
RSELRGGRQR	10	Unmodified	_RSELRGGRQR_					0	0	0			REV__ENST00000371443.5_1_9:140445786-140446769:+|nuORF	REV__ENST00000371443.5_1_9:140445786-140446769:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5641174316406	3	405.565676	1213.6752	-0.18903	-7.6663E-05	-2.0784	-0.00084294	-2.2675	-0.0009196	405.56470246140424	60.148	1.7799	60.134	59.159	60.939	-0.013729					123	48	3	0	0	0	0.81191	1	5531	5531		38.714	2.2673	1	242840	+		51470	25690	34426	34439	58143	58143					0.0769086521479494
RSELVLGNVL	10	Unmodified	_RSELVLGNVL_					0	0	0			REV__ENST00000490846.5_1_1:70758067-70779428:-|nuORF	REV__ENST00000490846.5_1_1:70758067-70779428:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.327392578125	2	550.327131	1098.63971	0.84562	0.00046537	-0.71285	-0.0003923	0.13278	7.307E-05	550.3267482489723	100.06	1.2234	100.21	99.636	100.86	0.15073					67	27	3	0	0	0	0.85251	1	10493	10493		19.997	0	1	401350	+		51471	18312	34427	34440	58144	58144					0.09433389914420331
RSERGSLR	8	Unmodified	_RSERGSLR_					0	0	0			REV__ENST00000463472.1_1_22:50969078-50969831:-|nuORF	REV__ENST00000463472.1_1_22:50969078-50969831:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.77276611328125	2	480.770314	959.526075	0.27327	0.00013138	2.2511	0.0010823	2.5244	0.0012137	480.77122608691184	41.141	0.55666	41.11	40.864	41.421	-0.030991					39	15	3	0	0	0	0.93685	1	3000	3000		52.937	1.6012	1	435130	+		51472	27076	34428	34441	58145	58145					0.04469339592048982
RSESKPGWI	9	Unmodified	_RSESKPGWI_					0	0	0		nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071|PRDM15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2802734375	2	530.282723	1058.55089	0.40735	0.00021601	-1.7796	-0.00094367	-1.3722	-0.00072766	530.2816186259668	76.523	0.6665	76.571	76.104	76.771	0.047981					42	26	2	0	0	0	0.76764	1	7475	7475		34.173	0	1	154180			51473	14967	34429	34442	58146	58146					0.023959746747550525
RSETLRKCM	9	Unmodified	_RSETLRKCM_					0	0	0		ENST00000512018.5_1_4:5142025-5170068:+|nuORF;ENST00000510398.1_1_4:5141502-5170068:+|nuORF	ENST00000512018.5_1_4:5142025-5170068:+|nuORF	ENST00000512018.5_1_4:5142025-5170068:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3197631835938	2	562.289168	1122.56378	0.16897	9.5007E-05	-4.4498	-0.0025021	-4.2808	-0.0024071	562.2864888179454	67.763	1.4186	68.311	67.532	68.951	0.54819					69	33	3	0	0	0	0.20789	1	7370	7370		20.947	3.582	1	562590			51474	13007	34430	34443	58147	58147					0.007403464709796026
RSFDPLPQHDT	11	Unmodified	_RSFDPLPQHDT_					0	0	0			REV__ENST00000551759.1_1_12:56998820-56999634:-|nuORF	REV__ENST00000551759.1_1_12:56998820-56999634:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2575988769531	3	438.214198	1311.62076	-1.1942	-0.00052332	2.0453	0.00089629	0.85112	0.00037297	438.2153527742437	29.669	0.17374	29.658	29.535	29.709	-0.01071					5	3	2	0	0	0	0.17563	1	1885	1885		35.496	0.31743	1	23232	+		51475	16722	34431	34444	58148	58148					-0.022581914472993958
RSFFKAKV	8	Unmodified	_RSFFKAKV_					0	0	0			REV__ENSG00000166441|ENST00000314138|RPL27A	REV__ENSG00000166441|ENST00000314138|RPL27A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7950134277344	2	491.795269	981.575986	-1.4502	-0.0007132	2.5925	0.001275	1.1423	0.00056177	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.81897	1	4678	4678		20.947	0.4651	1	1043600	+		51476	21294	34432	34445	58149	58149					0.08446074267999393
RSFFKAKV	8	Unmodified	_RSFFKAKV_					0	0	0			REV__ENSG00000166441|ENST00000314138|RPL27A	REV__ENSG00000166441|ENST00000314138|RPL27A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7953796386719	2	491.795269	981.575986	-0.62954	-0.00030961	1.7556	0.00086339	1.126	0.00055378	491.79606037186466	51.204	1.5616	51.18	50.34	51.902	-0.02343					100	43	3	0	0	0	0.87922	1	4526	4526		31.955	4.0726	1	394140	+		51477	21294	34432	34445	58150	58150					0.08446074267999393
RSFFKAKV	8	Unmodified	_RSFFKAKV_					0	0	0			REV__ENSG00000166441|ENST00000314138|RPL27A	REV__ENSG00000166441|ENST00000314138|RPL27A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.18365478515625	2	491.795269	981.575986	-0.33821	-0.00016633	0.94527	0.00046488	0.60706	0.00029855	491.79590835315713	74.331	0.98051	74.287	73.952	74.933	-0.043869					53	33	2	0	0	0	0.4196	1	7291	7291		29.15	9.7896	1	45168	+		51478	21294	34432	34445	58151	58151					0.08446074267999393
RSFFKAKV	8	Unmodified	_RSFFKAKV_					0	0	0			REV__ENSG00000166441|ENST00000314138|RPL27A	REV__ENSG00000166441|ENST00000314138|RPL27A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79656982421875	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.79929	1	3605	3605		18.324	0.95945	1	1502200	+		51479	21294	34432	34445	58152	58152					0.08446074267999393
RSFFKAKV	8	Unmodified	_RSFFKAKV_					0	0	0			REV__ENSG00000166441|ENST00000314138|RPL27A	REV__ENSG00000166441|ENST00000314138|RPL27A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	491.795269	981.575986	-0.080265	-3.9474E-05	0.7112	0.00034976	0.63093	0.00031029	491.79561473946836	74.513	0.42033	74.556	74.297	74.717	0.042908	0.17955	4.1626E-06	NaN	29.15	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37535	+		51480	21294	34432	34445							0.08446074267999393
RSFHGQCQLDL	11	Unmodified	_RSFHGQCQLDL_					0	0	0		ENSG00000122299|ENST00000355758|ZC3H7A	ENSG00000122299|ENST00000355758|ZC3H7A	ENSG00000122299|ENST00000355758|ZC3H7A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78009033203125	3	435.211911	1302.6139	-1.151	-0.00050094	-0.93184	-0.00040555	-2.0829	-0.00090649	435.21145126378116	43.917	0.4907	44.691	44.424	44.915	0.77379					22	11	3	0	0	0	0.17302	1	4046	4046		21.032	0	1	314630			51481	3218	34433	34446	58153	58153					-0.02529827599505552
RSFKKTLF	8	Unmodified	_RSFKKTLF_					0	0	0			REV__ENST00000540645.5_1_9:116823569-116838999:-|nuORF	REV__ENST00000540645.5_1_9:116823569-116838999:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.808837890625	2	513.808377	1025.6022	0.37872	0.00019459	0.75131	0.00038603	1.13	0.00058062	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.90465	1	4182	4182		40.573	1.7665	1	971720	+		51482	17636	34434	34447	58154	58154					0.09042343439477918
RSFLEGLVL	9	Unmodified	_RSFLEGLVL_					0	0	0		ENSG00000114270|ENST00000681320|COL7A1;nc|ENSG00000114270|Q02388-2|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.289794921875	2	517.305667	1032.59678	-0.42183	-0.00021822	-0.24081	-0.00012457	-0.66265	-0.00034279	517.3057340145187	61.673	0.62055	62.062	61.783	62.404	0.38845					16	13	2	0	0	0	0.20789	1	6560	6560		27.882	5.9224	1	88771			51483	2764	34435	34448	58155	58155					0.08178619856994374
RSFQMARVI	9	Unmodified	_RSFQMARVI_					0	0	0		ENSG00000171984|ENST00000303142|SHLD1	ENSG00000171984|ENST00000303142|SHLD1	ENSG00000171984|ENST00000303142|SHLD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.7476806640625	2	554.308218	1106.60188	0.15763	8.7377E-05	-2.5322	-0.0014036	-2.3746	-0.0013162	554.3072584492811	50.141	0.20942	50.588	50.473	50.682	0.44761					7	4	2	0	0	0	0.20789	1	4908	4908		40.778	1.5253	1	91343			51484	6730	34436	34449	58156	58156					0.052846004479533804
RSFQSVLS	8	Unmodified	_RSFQSVLS_					0	0	0		ENST00000405546.7_1_2:242611847-242611961:+|nuORF	ENST00000405546.7_1_2:242611847-242611961:+|nuORF	ENST00000405546.7_1_2:242611847-242611961:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	462.25091552734375	2	462.250892	922.48723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.327	1	47.3	46.8	47.8	-0.026737								0	0	0	0.29264	1	3940	3940		29.15	0	1				51485	11264	34437	34450	58157	58157					0.022886142376819407
RSFQYADIY	9	Unmodified	_RSFQYADIY_					0	0	0		ENSG00000166963|ENST00000300231|MAP1A;nc|ENSG00000166963|P78559-2|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	ENSG00000166963|ENST00000300231|MAP1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.7799682617188	2	581.780013	1161.54547	-1.0855	-0.00063151	0.34372	0.00019997	-0.74176	-0.00043154	581.7800280206288	44.594	0.94244	44.59	44.244	45.187	-0.0041618					66	21	4	0	0	0	0.58668	1	3521	3521		47.657	1.7054	1	701390			51486	6254	34438	34451	58158	58158					-0.028837489077204737
RSFRLLRVFKL	11	Unmodified	_RSFRLLRVFKL_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;ENST00000480032.4_1_2:166152333-166226884:+|nuORF;chr2:165139608-165140702|31|22.42|0.29|6.25|-|ENST00000658209|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000183873|Q14524-5|SCN5A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000136531|Q99250-2|SCN2A;ENSG00000136531|ENST00000375437|SCN2A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;ENSG00000007314|ENST00000435607|SCN4A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000183873|Q14524-3|SCN5A;ENSG00000185313|ENST00000449082|SCN10A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.976806640625	3	478.973384	1433.89832	0.065395	3.1322E-05	2.2352	0.0010706	2.3006	0.0011019	478.9743761165068	49.154	1.8702	49.148	48.387	50.257	-0.0056381					110	43	3	0	0	0	0.80164	1	4197	4197		10.998	1.7864	1	187140			51487	313;4699;8110;311;725;7570;7701	34439	34452	58159	58159					0.19872965947160992
RSFRLVQPAK	10	Unmodified	_RSFRLVQPAK_					0	0	0			REV__ENST00000518253.5_1_6:90312741-90340720:+|nuORF	REV__ENST00000518253.5_1_6:90312741-90340720:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2554626464844	3	401.243652	1200.70913	1.9131	0.00076761	3.4665	0.0013909	5.3795	0.0021585	401.2448746060269	18.654	0.18775	18.177	18.03	18.218	-0.47694					5	3	2	0	0	0	0.37624	1	403	403		25.126	4.2888	1	23661	+		51488	19206	34440	34453	58160	58160					0.11679893653831641
RSFRVAKVFR	10	Unmodified	_RSFRVAKVFR_					0	0	0		ENSG00000164091|ENST00000296490|WDR82	ENSG00000164091|ENST00000296490|WDR82	ENSG00000164091|ENST00000296490|WDR82	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5918884277344	3	422.591163	1264.75166	0.3184	0.00013455	3.9643	0.0016753	4.2827	0.0018098	422.5926872790867	54.344	2.5013	54.426	53.728	56.229	0.081528					190	74	4	0	0	0	0.8573	1	4572	4572		16.007	2.5527	1	1249100			51489	5916	34441	34454	58161	58161					0.12987288782073847
RSFTKFLLLK	10	Unmodified	_RSFTKFLLLK_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2663879394531	3	418.264053	1251.77033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.08	1	50.11	49.61	50.61	0.029629								0	0	0	0.45132	1	3913	3913		22.562	7.2241	1		+		51490	23662	34442	34455	58162	58162					0.1545140563325731
RSFVGLGP	8	Unmodified	_RSFVGLGP_					0	0	0		nc|ENSG00000141905|P08651-2|NFIC;ENSG00000141905|ENST00000443272|NFIC	nc|ENSG00000141905|P08651-2|NFIC	nc|ENSG00000141905|P08651-2|NFIC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7367248535156	2	416.73742	831.460287	1.2922	0.00053852	-2.0458	-0.00085256	-0.75356	-0.00031404	416.7364511739615	34.66	1.0479	35.041	34.852	35.9	0.3812					38	26	3	0	0	0	0.90983	1	2600	2600		42.396	5.237	1	2001900			51491	4532	34443	34456	58163	58163					0.03781550417147628
RSGAARGLLL	10	Unmodified	_RSGAARGLLL_					0	0	0		ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN;nc|ENSG00000188157|O00468-2|AGRN	ENSG00000188157|ENST00000379370|AGRN	ENSG00000188157|ENST00000379370|AGRN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7528991699219	2	507.314358	1012.61416	-0.81849	-0.00041523	-2.7552	-0.0013978	-3.5737	-0.001813	507.8146351867044	62.391	0.21677	62.78	62.665	62.882	0.38837					5	4	2	0	0	0	0.37624	1	6688	6688		30.318	0	1	199090			51492	7909	34444	34457	58164	58164					0.10835960182669169
RSGAGFTL	8	Unmodified	_RSGAGFTL_					0	0	0			REV__nc|ENSG00000211770|A0A0A0MT70|TRBJ2-6	REV__nc|ENSG00000211770|A0A0A0MT70|TRBJ2-6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.7182922363281	2	404.719227	807.423902	-0.43143	-0.00017461	-0.51319	-0.0002077	-0.94461	-0.0003823	404.7186609411621	74.727	0.60133	74.683	74.361	74.963	-0.043877					23	18	2	0	0	0	0.90983	1	7356	7356		42.396	3.59	1	47527	+		51493	30187	34445	34458	58165	58165					0.012486735204333854
RSGAIFTK	8	Unmodified	_RSGAIFTK_					0	0	0		nc|ENSG00000116062|P52701-4|MSH6;nc|ENSG00000116062|P52701-3|MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6	nc|ENSG00000116062|P52701-4|MSH6	nc|ENSG00000116062|P52701-4|MSH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.25531005859375	2	440.255977	878.497401	-1.0794	-0.00047521	-0.44173	-0.00019447	-1.5211	-0.00066968	440.25573050255707	67.457	0.77168	67.51	67.2	67.972	0.052368					65	27	4	0	0	0	0.86738	1	6016	6016		28.081	1.2854	1	460120			51494	2896	34446	34459	58166	58166					0.05329221962892916
RSGAKAPRLA	10	Unmodified	_RSGAKAPRLA_					0	0	0			REV__chr20:58855333-58855554|39|54.87|0.1|9.12|+|ENST00000481768|GNAS,GNAS;REV__nc|ENSG00000087460|Q5JWF2-2|GNAS	REV__nc|ENSG00000087460|Q5JWF2-2|GNAS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8104858398438	2	513.811982	1025.60941	-1.3056	-0.00067082	-4.3157	-0.0022175	-5.6213	-0.0028883	513.8096751801179	57.77	1.4975	57.77	57.038	58.535	0					86	59	2	0	0	0	0.86763	1	4977	4977		26.693	3.6504	1	92374	+		51495	15781;29717	34447	34460	58167	58167					0.09763076039894258
RSGANKYL	8	Unmodified	_RSGANKYL_					0	0	0		ENSG00000104941|ENST00000221538|RSPH6A	ENSG00000104941|ENST00000221538|RSPH6A	ENSG00000104941|ENST00000221538|RSPH6A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	454.75042724609375	2	454.751059	907.487565	-1.6847	-0.00076611	2.3264	0.001058	0.64176	0.00029184	454.7515981670757	53.014	0.66855	53.014	52.679	53.348	0					25	17	2	0	0	0	0.87479	1	4408	4408		30.504	2.2494	1	77189			51496	2170	34448	34461	58168	58168					0.030120339575091748
RSGARPRLA	9	Unmodified	_RSGARPRLA_					0	0	0		ENSG00000187244|ENST00000270233|BCAM	ENSG00000187244|ENST00000270233|BCAM	ENSG00000187244|ENST00000270233|BCAM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.297119140625	2	492.296499	982.578445	-0.71565	-0.00035231	0.38109	0.00018761	-0.33456	-0.0001647	492.29645794126446	62.013	0.36044	62.028	61.794	62.154	0.015724					16	11	2	0	0	0	0.7932	1	5377	5377		21.96	0	1	112670			51497	7850	34449	34462	58169	58169					0.08645922725656874
RSGARRAP	8	Unmodified	_RSGARRAP_					0	0	0		nc|ENSG00000112541|A8K010|LINC00473;ENST00000455853.1_1_6:166353685-166401023:-|nuORF	nc|ENSG00000112541|A8K010|LINC00473	nc|ENSG00000112541|A8K010|LINC00473	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2999572753906	2	435.754467	869.494381	-0.098738	-4.3026E-05	-3.4331	-0.001496	-3.5318	-0.001539	435.7530255036264	77.52	2.8664	77.47	75.656	78.523	-0.050789					161	106	3	0	0	0	0.4196	1	7498	7498		24.203	7.7296	1	390510			51498	11959	34450	34463	58170	58170					0.054413916287558095
RSGASREGCR	10	Unmodified	_RSGASREGCR_					0	0	0			REV__ENST00000593625.1_3_16:86609998-86612330:+|nuORF	REV__ENST00000593625.1_3_16:86609998-86612330:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.7643432617188	2	539.762163	1077.50977	0.64566	0.0003485	1.8937	0.0010222	2.5394	0.0013707	539.7631796411448	76.475	0.52975	76.426	76.14	76.67	-0.048264					26	16	2	0	0	0	0.81117	1	7580	7580		38.754	1.5945	1	74822	+		51499	29228	34451	34464	58171	58171					-0.025881096363718825
RSGGETYVL	9	Unmodified	_RSGGETYVL_					0	0	0			REV__ENSG00000164199|ENST00000405460|ADGRV1	REV__ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2535705566406	2	491.253631	980.49271	-0.77477	-0.00038061	0.2665	0.00013092	-0.50828	-0.00024969	491.25385460040826	47.762	0.5917	48.685	48.429	49.021	0.92315					35	14	3	0	0	0	0.25483	1	4586	4586		68.787	7.8149	1	1026700	+		51500	21051	34452	34465	58172	58172					0.0016829302946916869
RSGLTPRP	8	Unmodified	_RSGLTPRP_					0	0	0			REV__ENST00000567034.5_1_16:30199450-30200005:+|nuORF	REV__ENST00000567034.5_1_16:30199450-30200005:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2407531738281	2	442.259051	882.503549	0.59785	0.0002644	-0.17757	-7.853E-05	0.42028	0.00018587	442.25890690394783	83.777	1.6602	83.708	82.884	84.544	-0.069313					52	38	2	0	0	0	0.4196	1	8534	8534		38.806	9.6566	1	82482	+		51501	28877	34453	34466	58173	58173					0.057597401944121884
RSGLVHTAS	9	Unmodified	_RSGLVHTAS_					0	0	0			REV__ENSG00000005156|ENST00000378526|LIG3	REV__ENSG00000005156|ENST00000378526|LIG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25360107421875	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.69624	1	8304	8304		40.778	0.20554	1	1603800	+		51502	16076	34454	34467	58174	58174					0.027191324691898444
RSGNQGPVNDP	11	Unmodified	_RSGNQGPVNDP_					0	0	0			REV__nc|ENSG00000254827|Q8N1D0-2|SLC22A18AS	REV__nc|ENSG00000254827|Q8N1D0-2|SLC22A18AS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.2730102539062	2	570.773251	1139.53195	-1.1215	-0.00064012	-2.6324	-0.0015025	-3.7539	-0.0021426	571.2731771324486	59.343	1.7285	59.329	58.466	60.195	-0.013733					93	51	2	0	0	0	0.69248	1	5446	5446		32.751	1.2207	1	112100	+		51503	30239	34455	34468	58175	58175					-0.03223606686947278
RSGPAGRLVL	10	Unmodified	_RSGPAGRLVL_					0	0	0		nc|ENSG00000105298|Q8WUQ7-2|CACTIN;ENST00000591726.1_1_19:3610667-3611924:-|nuORF;ENST00000585942.5_1_19:3610667-3611356:-|nuORF;ENST00000429344.6_1_19:3610667-3611147:-|nuORF	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3172607421875	2	513.314358	1024.61416	0.39078	0.00020059	4.0535	0.0020807	4.4443	0.0022813	513.3164630994114	53.539	1.8096	53.62	52.959	54.769	0.081528					78	48	3	0	0	0	0.86218	1	4394	4394		32.812	3.6629	1	262680			51504	14829	34456	34469	58176	58176					0.10283960182664487
RSGPARAR	8	Unmodified	_RSGPARAR_					0	0	0		ENST00000469014.1_1_17:61926730-61934782:+|nuORF;ENST00000463377.6_2_17:61926730-61939809:+|nuORF	REV__ENST00000488949.1_1_20:56884861-56920492:+|nuORF	REV__ENST00000488949.1_1_20:56884861-56920492:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516784667969	2	435.754467	869.494381	-0.16543	-7.2087E-05	-3.2265	-0.001406	-3.392	-0.0014781	435.75313649583217	76.941	1.5026	76.994	75.71	77.213	0.052704					76	54	2	0	0	0	0.4196	1	7435	7435		21.96	0	1	358690			51505	27609	34457	34470	58177	58177					0.054413916287558095
RSGPARAR	8	Unmodified	_RSGPARAR_					0	0	0		ENST00000469014.1_1_17:61926730-61934782:+|nuORF;ENST00000463377.6_2_17:61926730-61939809:+|nuORF	REV__ENST00000488949.1_1_20:56884861-56920492:+|nuORF	REV__ENST00000488949.1_1_20:56884861-56920492:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2999572753906	2	435.754467	869.494381	0.50766	0.00022122	-3.1756	-0.0013838	-2.668	-0.0011626	435.7532453697159	75.4	0.4332	75.532	75.211	75.644	0.13208					14	11	2	0	0	0	0.4196	1	6995	6995		14.137	0	1	35974			51506	27609	34457	34470	58178	58178					0.054413916287558095
RSGPPRVNPT	10	Unmodified	_RSGPPRVNPT_					0	0	0		ENST00000232854.8_1_3:50606657-50608415:+|nuORF	ENST00000232854.8_1_3:50606657-50608415:+|nuORF	ENST00000232854.8_1_3:50606657-50608415:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.8014526367188	2	540.799072	1079.58359	-0.095369	-5.1576E-05	3.7057	0.002004	3.6103	0.0019525	540.800879373307	50.317	0.71403	50.315	49.991	50.705	-0.0020447					39	17	3	0	0	0	0.6116	1	4272	4272		49.442	1.7842	1	274590			51507	9220	34458	34471	58179	58179					0.046981817976075035
RSGPPRVNPT	10	Unmodified	_RSGPPRVNPT_					0	0	0		ENST00000232854.8_1_3:50606657-50608415:+|nuORF	ENST00000232854.8_1_3:50606657-50608415:+|nuORF	ENST00000232854.8_1_3:50606657-50608415:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.8014526367188	2	540.799072	1079.58359	0.34608	0.00018716	3.247	0.001756	3.5931	0.0019431	540.800590860518	50.456	0.56704	50.463	50.125	50.692	0.0077438					31	12	3	0	0	0	0.38353	1	4313	4313		65.465	14.273	1	250740			51508	9220	34458	34471	58180	58180					0.046981817976075035
RSGPVGPR	8	Unmodified	_RSGPVGPR_					0	0	0			REV__ENST00000393229.3_1_9:135117391-135118432:+|nuORF	REV__ENST00000393229.3_1_9:135117391-135118432:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2370300292969	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.8347	1	7334	7334		23.042	2.5607	1	2127000	+		51509	26050	34459	34472	58181	58181					0.04243184505901354
RSGRKPIP	8	Unmodified	_RSGRKPIP_					0	0	0		ENST00000556874.1_1_14:66975812-66976097:-|nuORF	ENST00000556874.1_1_14:66975812-66976097:-|nuORF	ENST00000556874.1_1_14:66975812-66976097:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.78399658203125	2	455.782693	909.550834	0.22092	0.00010069	3.994	0.0018204	4.2149	0.0019211	455.78429383584523	43.788	2.2099	43.762	42.925	45.135	-0.026768					87	51	2	0	0	0	0.8347	1	3342	3342		23.042	1.0826	1	242760			51510	13758	34460	34473	58182	58182					0.09244019465415931
RSGRLGVP	8	Unmodified	_RSGRLGVP_					0	0	0		ENST00000547407.5_1_16:712941-717586:+|nuORF	ENST00000547407.5_1_16:712941-717586:+|nuORF	ENST00000547407.5_1_16:712941-717586:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1994323730469	2	421.253769	840.492984	0.072715	3.0631E-05	0.9293	0.00039147	1.002	0.0004221	421.2540306515392	84.084	1.1383	84.539	84.106	85.244	0.45555					66	27	3	0	0	0	0.4196	1	9829	9829		19.36	1.0356	1	484900			51511	13608	34461	34474	58183	58183					0.06635757539982023
RSGRTRPSE	9	Unmodified	_RSGRTRPSE_					0	0	0			REV__chr6:33321243-33321719|30|10.07|0.42|4.59|-|0|None,DAXX|1	REV__chr6:33321243-33321719|30|10.07|0.42|4.59|-|0|None,DAXX|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7937622070312	2	523.278503	1044.54245	0.17236	9.0193E-05	3.1267	0.0016362	3.2991	0.0017263	523.2802867213619	20.263	0.36549	19.633	19.443	19.809	-0.6296					11	7	2	0	0	0	0.20789	1	620	620		29.17	7.4843	1	27559	+		51512	15880	34462	34475	58184	58184					0.021964207581504525
RSGRVVGSL	9	Unmodified	_RSGRVVGSL_					0	0	0		nc|ENSG00000188167|Q6ZT21-2|TMPPE;ENSG00000188167|ENST00000342462|TMPPE	nc|ENSG00000188167|Q6ZT21-2|TMPPE	nc|ENSG00000188167|Q6ZT21-2|TMPPE	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7779541015625	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.348	1	79.479	78.979	79.979	0.13086								0	0	0	0.36353	1	7521	7521		49.442	5.3247	1				51513	7912	34463	34476	58185	58185					0.07307411740191583
RSGSSRVLI	9	Unmodified	_RSGSSRVLI_					0	0	0		ENST00000581808.1_1_17:7481021-7481457:+|nuORF;ENST00000461021.1_1_3:186505247-186505672:+|nuORF;ENST00000494445.1_1_3:186505247-186506105:+|nuORF;ENST00000485101.5_1_3:186505247-186505556:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENSG00000161960|ENST00000293831|EIF4A1;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2	ENST00000581808.1_1_17:7481021-7481457:+|nuORF	ENST00000581808.1_1_17:7481021-7481457:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7912292480469	2	487.790715	973.566878	0.84663	0.00041298	-1.0594	-0.00051676	-0.21277	-0.00010379	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.76764	1	8966	8966		34.173	0.67956	1	2238600			51514	5405	34464	34477	58186	58186					0.07903680911670108
RSGSSRVLI	9	Unmodified	_RSGSSRVLI_					0	0	0		ENST00000581808.1_1_17:7481021-7481457:+|nuORF;ENST00000461021.1_1_3:186505247-186505672:+|nuORF;ENST00000494445.1_1_3:186505247-186506105:+|nuORF;ENST00000485101.5_1_3:186505247-186505556:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENSG00000161960|ENST00000293831|EIF4A1;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2	ENST00000581808.1_1_17:7481021-7481457:+|nuORF	ENST00000581808.1_1_17:7481021-7481457:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79052734375	2	487.790715	973.566878	-1.4694	-0.00071678	1.0759	0.00052482	-0.39353	-0.00019196	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.76764	1	8094	8094		34.173	1.3601	1	607090			51515	5405	34464	34477	58187	58187					0.07903680911670108
RSGSSRVLI	9	Unmodified	_RSGSSRVLI_					0	0	0		ENST00000581808.1_1_17:7481021-7481457:+|nuORF;ENST00000461021.1_1_3:186505247-186505672:+|nuORF;ENST00000494445.1_1_3:186505247-186506105:+|nuORF;ENST00000485101.5_1_3:186505247-186505556:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENSG00000161960|ENST00000293831|EIF4A1;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2	ENST00000581808.1_1_17:7481021-7481457:+|nuORF	ENST00000581808.1_1_17:7481021-7481457:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.79058837890625	2	487.790715	973.566878	-0.71211	-0.00034736	0.24728	0.00012062	-0.46484	-0.00022674	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.75725	1	7805	7805		36.447	0	1	678280			51516	5405	34464	34477	58188	58188					0.07903680911670108
RSGTDTHDPD	10	Unmodified	_RSGTDTHDPD_					0	0	0			REV__ENST00000508069.6_1_4:48899856-48908858:-|nuORF	REV__ENST00000508069.6_1_4:48899856-48908858:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.7333374023438	2	550.733791	1099.45303	-0.375	-0.00020652	-1.1973	-0.00065938	-1.5723	-0.00086591	550.7328066614225	25.621	0.68167	25.364	25.087	25.769	-0.2572					49	15	5	0	0	0	0.80179	1	1333	1333		39.253	8.7492	1	339380	+		51517	27916	34465	34478	58189	58189					-0.09271878711911086
RSHGAIKA	8	Unmodified	_RSHGAIKA_					0	0	0		ENSG00000178021|ENST00000317802|TSPYL6	ENSG00000178021|ENST00000317802|TSPYL6	ENSG00000178021|ENST00000317802|TSPYL6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2270812988281	2	420.245944	838.477334	-1.7846	-0.00074999	1.6938	0.00071179	-0.090881	-3.8192E-05	420.2467336463019	82.799	2.0433	82.954	81.786	83.83	0.15474					81	47	3	0	0	0	0.4196	1	7884	7884		7.6903	0	1	126050			51518	7175	34466	34479	58190	58190					0.05163471022945032
RSHGKKLPPAS	11	Unmodified	_RSHGKKLPPAS_					0	0	0		nc|ENSG00000168781|Q6PFW1-5|PPIP5K1;nc|ENSG00000168781|Q6PFW1-4|PPIP5K1;nc|ENSG00000168781|Q6PFW1-3|PPIP5K1;nc|ENSG00000168781|Q6PFW1-2|PPIP5K1;nc|ENSG00000168781|Q6PFW1|PPIP5K1;ENSG00000168781|ENST00000420765|PPIP5K1;ENST00000409481.1_1_15:43942054-43960244:-|nuORF;ENST00000488490.1_1_15:43840825-43860679:-|nuORF	nc|ENSG00000168781|Q6PFW1-5|PPIP5K1	nc|ENSG00000168781|Q6PFW1-5|PPIP5K1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3436279296875	2	589.343646	1176.67274	-0.40075	-0.00023618	-0.79332	-0.00046754	-1.1941	-0.00070372	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.66929	1	9037	9037		36.447	1.2947	1	4112500			51519	6435	34467	34480	58191	58191					0.09147016757151505
RSHGKKLPPAS	11	Unmodified	_RSHGKKLPPAS_					0	0	0		nc|ENSG00000168781|Q6PFW1-5|PPIP5K1;nc|ENSG00000168781|Q6PFW1-4|PPIP5K1;nc|ENSG00000168781|Q6PFW1-3|PPIP5K1;nc|ENSG00000168781|Q6PFW1-2|PPIP5K1;nc|ENSG00000168781|Q6PFW1|PPIP5K1;ENSG00000168781|ENST00000420765|PPIP5K1;ENST00000409481.1_1_15:43942054-43960244:-|nuORF;ENST00000488490.1_1_15:43840825-43860679:-|nuORF	nc|ENSG00000168781|Q6PFW1-5|PPIP5K1	nc|ENSG00000168781|Q6PFW1-5|PPIP5K1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3421630859375	2	589.343646	1176.67274	2.2135	0.0013045	-3.7891	-0.0022331	-1.5756	-0.00092856	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.72739	1	9665	9665		27.047	0.3544	1	5579200			51520	6435	34467	34480	58192	58192					0.09147016757151505
RSHGKKLPPAS	11	Unmodified	_RSHGKKLPPAS_					0	0	0		nc|ENSG00000168781|Q6PFW1-5|PPIP5K1;nc|ENSG00000168781|Q6PFW1-4|PPIP5K1;nc|ENSG00000168781|Q6PFW1-3|PPIP5K1;nc|ENSG00000168781|Q6PFW1-2|PPIP5K1;nc|ENSG00000168781|Q6PFW1|PPIP5K1;ENSG00000168781|ENST00000420765|PPIP5K1;ENST00000409481.1_1_15:43942054-43960244:-|nuORF;ENST00000488490.1_1_15:43840825-43860679:-|nuORF	nc|ENSG00000168781|Q6PFW1-5|PPIP5K1	nc|ENSG00000168781|Q6PFW1-5|PPIP5K1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3432006835938	2	589.343646	1176.67274	-0.65438	-0.00038565	-0.61013	-0.00035958	-1.2645	-0.00074523	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.68532	1	10091	10091		33.922	7.2287	1	16804000			51521	6435	34467	34480	58193	58193					0.09147016757151505
RSHGKKLPPAS	11	Unmodified	_RSHGKKLPPAS_					0	0	0		nc|ENSG00000168781|Q6PFW1-5|PPIP5K1;nc|ENSG00000168781|Q6PFW1-4|PPIP5K1;nc|ENSG00000168781|Q6PFW1-3|PPIP5K1;nc|ENSG00000168781|Q6PFW1-2|PPIP5K1;nc|ENSG00000168781|Q6PFW1|PPIP5K1;ENSG00000168781|ENST00000420765|PPIP5K1;ENST00000409481.1_1_15:43942054-43960244:-|nuORF;ENST00000488490.1_1_15:43840825-43860679:-|nuORF	nc|ENSG00000168781|Q6PFW1-5|PPIP5K1	nc|ENSG00000168781|Q6PFW1-5|PPIP5K1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3426513671875	2	589.343646	1176.67274	0.71715	0.00042265	-1.4797	-0.00087205	-0.76255	-0.0004494	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.72739	1	11006	11006		27.047	0.98393	1	2439600			51522	6435	34467	34480	58194	58194					0.09147016757151505
RSHIKDLIKVA	11	Unmodified	_RSHIKDLIKVA_					0	0	0		ENSG00000277161|ENST00000614443|PIGW	ENSG00000277161|ENST00000614443|PIGW	ENSG00000277161|ENST00000614443|PIGW	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.393798828125	2	640.395879	1278.7772	-0.70367	-0.00045063	-3.5698	-0.0022861	-4.2735	-0.0027367	640.3935337179228	53.682	0.9059	53.657	53.238	54.144	-0.024754					44	21	3	0	0	0	0.74763	1	4819	4819		22.58	2.5829	1	128690			51523	9017	34468	34481	58195	58195					0.14896718513841734
RSHKRKHR	8	Unmodified	_RSHKRKHR_					0	0	0			REV__nc|ENSG00000125846|P52736-3|ZNF133	REV__nc|ENSG00000125846|P52736-3|ZNF133	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8331909179688	2	552.834114	1103.65368	-0.71064	-0.00039287	0.84717	0.00046834	0.13653	7.5479E-05	552.8343973070275	84.083	2.0319	84.083	83.586	85.618	0					122	47	3	0	0	0	0.82658	1	7982	7982		21.96	0	1	300740	+		51524	18674	34469	34482	58196	58196					0.10599524976737484
RSHKRLGARDS	11	Unmodified	_RSHKRLGARDS_					0	0	0			REV__ENSG00000167394|ENST00000300849|ZNF668	REV__ENSG00000167394|ENST00000300849|ZNF668	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8599853515625	2	641.857983	1281.70141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.52	1	115.5	115	116	-0.02433								0	0	0	0.56276	1	12792	12792		37.812	2.6595	1		+		51525	21384	34470	34483	58197	58197					0.071831343862641
RSHLIIHQRIH	11	Unmodified	_RSHLIIHQRIH_					0	0	0		ENSG00000147789|ENST00000532777|ZNF7;nc|ENSG00000147789|P17097-2|ZNF7	ENSG00000147789|ENST00000532777|ZNF7	ENSG00000147789|ENST00000532777|ZNF7	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.614013671875	3	470.612738	1408.81638	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.496	1	62.519	62.019	63.019	0.022984								0	0	0	0.56276	1	5452	5452		16.53	1.1967	1				51526	4922	34471	34484	58198	58198					0.1283286358807345
RSHPKTGT	8	Unmodified	_RSHPKTGT_					0	0	0		ENSG00000082196|ENST00000382065|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2409362792969	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.91472	2	7572	7572;7619		44.117	12.587	1	716910			51527	1481	34472	34485	58199;58200	58199					0.02122863297722688
RSHPKTGT	8	Unmodified	_RSHPKTGT_					0	0	0		ENSG00000082196|ENST00000382065|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	ENSG00000082196|ENST00000382065|C1QTNF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2405090332031	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.88185	1	8318	8318		32.812	0.85756	1	1068200			51528	1481	34472	34485	58201	58201					0.02122863297722688
RSHSLVATYLL	11	Unmodified	_RSHSLVATYLL_					0	0	0		ENSG00000154143|ENST00000284288|PANX3	ENSG00000154143|ENST00000284288|PANX3	ENSG00000154143|ENST00000284288|PANX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.57501220703125	3	420.575067	1258.70337	0.054208	2.2798E-05	0.93584	0.00039359	0.99005	0.00041639	420.5753673707218	47.088	0.73682	47.074	46.65	47.387	-0.013817					48	19	3	0	0	0	0.74771	1	3792	3792		22.562	0.87584	1	673640			51529	5255	34473	34486	58202	58202					0.08436750351529554
RSHTGAMEV	9	Unmodified	_RSHTGAMEV_					0	0	0		ENST00000448635.2_1_19:17378325-17387315:+|nuORF;ENST00000595393.5_1_19:17378325-17387472:+|nuORF	ENST00000448635.2_1_19:17378325-17387315:+|nuORF	ENST00000448635.2_1_19:17378325-17387315:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7945861816406	2	494.237458	986.460364	0.86147	0.00042577	-4.4348	-0.0021919	-3.5734	-0.0017661	494.23506236337215	21.782	0.52663	21.847	21.611	22.138	0.064745					29	18	2	0	0	0	0.20789	1	634	634		25.574	0	1	30883			51530	11862	34474	34487	58203	58203					-0.03340817645164407
RSIAKGKNLVI	11	Unmodified	_RSIAKGKNLVI_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.5929870605469	3	400.25919	1197.75574	0.45646	0.0001827	-4.4677	-0.0017882	-4.0112	-0.0016055	400.25729523506845	15.426	0.21626	15.401	15.269	15.485	-0.024207					11	6	2	0	0	0	0.76892	1	27	27		17.833	0	1	92941	+		51531	19317	34475	34488	58204	58204					0.16477333485136114
RSIERTLLQRR	11	Unmodified	_RSIERTLLQRR_					0	0	0			REV__ENST00000486015.1_1_10:77162714-77167299:+|nuORF	REV__ENST00000486015.1_1_10:77162714-77167299:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.62353515625	3	476.623303	1426.84808	-0.29165	-0.00013901	1.0591	0.00050481	0.76748	0.0003658	476.6237090735966	107.88	0.41002	107.92	107.56	107.97	0.035622					34	9	5	0	0	0	0.78083	1	11850	11850		15.337	2.38	1	121210000	+		51532	27538	34476	34489	58205	58205					0.1517281155136061
RSIERTLLQRR	11	Unmodified	_RSIERTLLQRR_					0	0	0			REV__ENST00000486015.1_1_10:77162714-77167299:+|nuORF	REV__ENST00000486015.1_1_10:77162714-77167299:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.95751953125	3	476.623303	1426.84808	-1.6911	-0.000806	2.5351	0.0012083	0.84407	0.0004023	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.79476	1	12780	12780		12.433	0.50046	1	2577100	+		51533	27538	34476	34489	58206	58206					0.1517281155136061
RSIGGSAKG	9	Unmodified	_RSIGGSAKG_					0	0	0			REV__ENST00000348160.8_1_4:26322496-26387983:+|nuORF	REV__ENST00000348160.8_1_4:26322496-26387983:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7364196777344	2	416.735409	831.456264	1.2922	0.00053852	2.7807	0.0011588	4.0729	0.0016973	416.7364511739615	34.66	1.0479	35.041	34.852	35.9	0.3812					38	26	3	0	0	0	0.77244	1	2615	2615		32.812	0.85756	1	2001900	+		51534	25326	34477	34490	58207	58207					0.0337946092341781
RSIGKRQLVSI	11	Unmodified	_RSIGKRQLVSI_					0	0	0			REV__ENSG00000164465|ENST00000338728|DCBLD1	REV__ENSG00000164465|ENST00000338728|DCBLD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.5995178222656	3	419.598094	1255.77245	1.7793	0.00074657	1.9244	0.00080747	3.7036	0.001554	419.5987701797605	24.325	1.1367	23.811	23.408	24.544	-0.51365					65	23	4	0	0	0	0.63837	1	1179	1179		40.015	1.3013	1	934580	+		51535	21084	34478	34491	58208	58208					0.1547983437108087
RSIHLAKAK	9	Unmodified	_RSIHLAKAK_					0	0	0			REV__ENSG00000176208|ENST00000321990|ATAD5	REV__ENSG00000176208|ENST00000321990|ATAD5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.3253173828125	2	512.324725	1022.6349	0.9839	0.00050408	-1.2426	-0.00063659	-0.25866	-0.00013252	512.324091379389	21.2	0.73422	20.741	20.395	21.129	-0.4591					30	17	2	0	0	0	0.55097	1	765	765		49.442	20.292	1	143260	+		51536	22114	34479	34492	58209	58209					0.12448550562316996
RSIIKELH	8	Unmodified	_RSIIKELH_					0	0	0			REV__ENST00000526142.5_1_11:419653-429752:-|nuORF	REV__ENST00000526142.5_1_11:419653-429752:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.30499267578125	2	498.303458	994.592364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.735	1	52.805	52.305	53.305	0.070713								0	0	0	0.29452	1	4269	4269		33.516	0.70317	1		+		51537	28198	34480	34493	58210	58210					0.09485155434083481
RSIKGSQLK	9	Unmodified	_RSIKGSQLK_					0	0	0			REV__ENSG00000163156|ENST00000368905|SCNM1	REV__ENSG00000163156|ENST00000368905|SCNM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8150634765625	2	508.81419	1015.61383	-0.63775	-0.0003245	1.2358	0.0006288	0.59806	0.0003043	508.81487501461754	43.667	3.2315	44.117	43.686	46.917	0.45025					183	79	5	0	0	0	0.14236	2	4033	4021;4033		85.161	2.9203	1	105110000	+		51538	20886	34481	34494	58211;58212	58212					0.10664540462801142
RSIKGSQLK	9	Unmodified	_RSIKGSQLK_					0	0	0			REV__ENSG00000163156|ENST00000368905|SCNM1	REV__ENSG00000163156|ENST00000368905|SCNM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.81475830078125	2	508.81419	1015.61383	-0.9437	-0.00048017	1.3512	0.00068751	0.4075	0.00020734	508.814896871399	43.452	2.9729	44.226	43.866	46.839	0.77379					192	73	5	0	0	0	0.16822	1	4009	4009		80.455	5.4113	1	100420000	+		51539	20886	34481	34494	58213	58213					0.10664540462801142
RSIKGVSK	8	Unmodified	_RSIKGVSK_					0	0	0		ENSG00000050030|ENST00000055682|NEXMIF	ENSG00000050030|ENST00000055682|NEXMIF	ENSG00000050030|ENST00000055682|NEXMIF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26788330078125	2	437.777077	873.5396	-0.75784	-0.00033177	-0.41263	-0.00018064	-1.1705	-0.0005124	437.77559636146776	50.74	0.41102	50.717	50.553	50.964	-0.02343					32	15	3	0	0	0	0.4196	1	4417	4417		14.137	0	1	93412			51540	991	34482	34495	58214	58214					0.09777197371283819
RSIKHKVAL	9	Unmodified	_RSIKHKVAL_					0	0	0			REV__ENST00000419045.1_1_X:48634893-48635220:-|nuORF	REV__ENST00000419045.1_1_X:48634893-48635220:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.361083984375	2	526.340375	1050.6662	-0.17192	-9.0486E-05	3.7055	0.0019504	3.5336	0.0018599	526.8442112127055	35.239	0.20292	35.182	35.047	35.25	-0.056385					6	4	2	0	0	0	0.20789	1	2267	2267		27.882	0	1	24300	+		51541	21377	34483	34496	58215	58215					0.14289123596404352
RSIKKGFF	8	Unmodified	_RSIKKGFF_					0	0	0		ENST00000295400.10_1_2:70677757-70680369:-|nuORF	ENST00000295400.10_1_2:70677757-70680369:-|nuORF	ENST00000295400.10_1_2:70677757-70680369:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79595947265625	2	491.795269	981.575986	0.09879	4.8585E-05	0.95013	0.00046727	1.0489	0.00051585	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.89043	1	4271	4271		35.618	2.1027	1	1349600			51542	9718	34484	34497	58216	58216					0.08446074267999393
RSIKLCPPL	9	Unmodified	_RSIKLCPPL_					0	0	0			REV__ENSG00000111701|ENST00000229304|APOBEC1	REV__ENSG00000111701|ENST00000229304|APOBEC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8064575195312	2	513.810062	1025.60557	-1.3833	-0.00071076	-0.62879	-0.00032308	-2.0121	-0.0010338	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.69914	1	4422	4422		40.573	0	1	1148600	+		51543	17890	34485	34498	58217	58217					0.09379270221802471
RSIKLCPPL	9	Unmodified	_RSIKLCPPL_					0	0	0			REV__ENSG00000111701|ENST00000229304|APOBEC1	REV__ENSG00000111701|ENST00000229304|APOBEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8087158203125	2	513.810062	1025.60557	0.090876	4.6693E-05	-2.2226	-0.001142	-2.1317	-0.0010953	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.71772	1	4117	4117		39.253	8.7492	1	1448700	+		51544	17890	34485	34498	58218	58218					0.09379270221802471
RSIKLCPPL	9	Unmodified	_RSIKLCPPL_					0	0	0			REV__ENSG00000111701|ENST00000229304|APOBEC1	REV__ENSG00000111701|ENST00000229304|APOBEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8086547851562	2	513.810062	1025.60557	-0.43911	-0.00022562	-1.7271	-0.0008874	-2.1662	-0.001113	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.7932	1	4248	4248		26.693	1.1189	1	1606900	+		51545	17890	34485	34498	58219	58219					0.09379270221802471
RSIKLCPPL	9	Unmodified	_RSIKLCPPL_					0	0	0			REV__ENSG00000111701|ENST00000229304|APOBEC1	REV__ENSG00000111701|ENST00000229304|APOBEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.80908203125	2	513.810062	1025.60557	-0.39189	-0.00020136	-1.6821	-0.00086429	-2.074	-0.0010656	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.7932	1	4595	4595		24.203	2.2429	1	771120	+		51546	17890	34485	34498	58220	58220					0.09379270221802471
RSIKNKVTA	9	Unmodified	_RSIKNKVTA_					0	0	0		ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.81549072265625	2	508.81419	1015.61383	-0.63775	-0.0003245	1.2358	0.0006288	0.59806	0.0003043	508.81487501461754	43.667	3.2315	44.117	43.686	46.917	0.45025					183	79	5	0	0	0	0.3164	1	4072	4072		63.534	1.8426	1	105110000			51547	6911	34486	34499	58221	58221					0.10664540462801142
RSILALPN	8	Unmodified	_RSILALPN_					0	0	0			REV__ENSG00000169814|ENST00000643237|BTD	REV__ENSG00000169814|ENST00000643237|BTD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2404479980469	2	442.271627	882.528701	0.24902	0.00011014	-0.83538	-0.00036947	-0.58636	-0.00025933	442.2713056840487	82.388	1.1904	82.862	82.511	83.702	0.47383					41	28	2	0	0	0	0.4196	1	9596	9596		35.618	5.1146	1	268570	+		51548	21604	34487	34500	58222	58222					0.08273794996989636
RSILAPLAW	9	Unmodified	_RSILAPLAW_					0	0	0		ENST00000462857.5_1_6:30657820-30658751:-|nuORF;nc|ENSG00000137404|Q8IXM6-2|NRM;ENSG00000137404|ENST00000376421|NRM	ENST00000462857.5_1_6:30657820-30658751:-|nuORF	ENST00000462857.5_1_6:30657820-30658751:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087158203125	2	513.808377	1025.6022	-1.4174	-0.00072826	2.551	0.0013107	1.1336	0.00058246	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.78983	1	4130	4130		27.882	2.3082	1	1977600			51549	4195	34488	34501	58223	58223					0.0904234343945518
RSILFGGQ	8	Unmodified	_RSILFGGQ_					0	0	0			REV__ENST00000531486.1_1_17:45681241-45696545:+|nuORF	REV__ENST00000531486.1_1_17:45681241-45696545:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2464294433594	2	439.248152	876.481751	1.4532	0.00063831	-1.1904	-0.00052288	0.26281	0.00011544	439.24756011359966	23.741	0.72172	23.167	22.92	23.641	-0.57415					26	16	2	0	0	0	0.90837	1	1084	1084		56.721	1.2168	1	323640	+		51550	19669	34489	34502	58224	58224					0.03856935445867293
RSILGKDSS	9	Unmodified	_RSILGKDSS_					0	0	0			REV__nc|ENSG999|O00370|L1_ORF2;REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|37|1|sense	REV__nc|ENSG999|O00370|L1_ORF2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.7655334472656	2	481.766906	961.519259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.969	1	51.967	51.467	52.467	-0.0020447								0	0	0	0.28223	1	4473	4473		37.812	3.639	1		+		51551	30321;29570	34490	34503	58225	58225					0.036959819208163935
RSILKRQKHLR	11	Unmodified	_RSILKRQKHLR_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.97479248046875	3	478.975788	1433.90553	-1.2444	-0.00059604	-1.683	-0.00080613	-2.9274	-0.0014022	478.9748581503008	47.376	0.58065	47.372	46.976	47.556	-0.0037956					25	15	2	0	0	0	0.76087	1	3834	3834		19.627	0.66061	1	245000			51552	14896	34491	34504	58226	58226					0.2059369854760007
RSILKRQKHLR	11	Unmodified	_RSILKRQKHLR_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.30999755859375	3	478.975788	1433.90553	0.32204	0.00015425	-2.7165	-0.0013011	-2.3944	-0.0011469	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.76087	1	3857	3857		19.627	2.4602	1	307830			51553	14896	34491	34504	58227	58227					0.2059369854760007
RSILKRQKHLR	11	Unmodified	_RSILKRQKHLR_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3092041015625	3	478.975788	1433.90553	-0.20548	-9.8418E-05	-2.506	-0.0012003	-2.7115	-0.0012987	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.81892	1	3304	3304		8.0344	0	1	468190			51554	14896	34491	34504	58228	58228					0.2059369854760007
RSILKRQKHLR	11	Unmodified	_RSILKRQKHLR_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97412109375	3	478.975788	1433.90553	-0.315	-0.00015088	-2.2657	-0.0010852	-2.5807	-0.0012361	478.9746652956354	49.514	1.8124	49.42	48.44	50.252	-0.093178					109	43	3	0	0	0	0.80164	1	3930	3930		10.998	2.1989	1	294110			51555	14896	34491	34504	58229	58229					0.2059369854760007
RSILKRQKHLR	11	Unmodified	_RSILKRQKHLR_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.9429016113281	3	478.975788	1433.90553	-0.29053	-0.00013916	-2.7978	-0.0013401	-3.0884	-0.0014793	478.974500153959	56.936	1.0873	57.491	56.916	58.003	0.55513					38	25	2	0	0	0	0.17289	1	5863	5863		27.644	10.477	1	168560			51556	14896	34491	34504	58230	58230					0.2059369854760007
RSILKRQKHLR	11	Unmodified	_RSILKRQKHLR_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	478.975788	1433.90553	-1.4941	-0.00071562	-0.73758	-0.00035328	-2.2317	-0.0010689	478.97531296775423	57.497	0.33898	57.497	57.327	57.666	0	-0.031419	0.0014379	NaN	27.644	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52420			51557	14896	34491	34504							0.2059369854760007
RSILKRQKHLR	11	Unmodified	_RSILKRQKHLR_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	478.975788	1433.90553	-0.22061	-0.00010567	-2.29	-0.0010969	-2.5106	-0.0012025	478.97464514468624	46.722	1.5074	47.193	46.614	48.121	0.4714	-0.15929	-0.00055658	NaN	19.627	52	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	746000			51558	14896	34491	34504							0.2059369854760007
RSILKRQKHLR	11	Unmodified	_RSILKRQKHLR_					0	0	0		nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	478.975788	1433.90553	-1.6128	-0.00077249	-1.2601	-0.00060354	-2.8729	-0.001376	478.97515469632765	46.389	0.67909	47.312	46.756	47.435	0.92315	-0.040409	0.00092339	NaN	19.627	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	594310			51559	14896	34491	34504							0.2059369854760007
RSILPFHI	8	Unmodified	_RSILPFHI_					0	0	0			REV__ENST00000454079.5_1_3:50004874-50005063:+|nuORF	REV__ENST00000454079.5_1_3:50004874-50005063:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79595947265625	2	491.795269	981.575986	-0.70573	-0.00034708	1.5523	0.0007634	0.84654	0.00041632	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.82658	1	4306	4306		21.96	0.25755	1	772710	+		51560	26919	34492	34505	58231	58231					0.08446074267999393
RSILPFHI	8	Unmodified	_RSILPFHI_					0	0	0			REV__ENST00000454079.5_1_3:50004874-50005063:+|nuORF	REV__ENST00000454079.5_1_3:50004874-50005063:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7970275878906	2	491.795269	981.575986	-0.16137	-7.9361E-05	1.242	0.0006108	1.0806	0.00053144	491.795730554191	52.394	1.7298	53.062	52.517	54.247	0.6673					112	41	4	0	0	0	0.87922	1	5230	5230		31.955	0	1	2437000	+		51561	26919	34492	34505	58232	58232					0.08446074267999393
RSINEKDYHSR	11	Unmodified	_RSINEKDYHSR_					0	0	0		ENST00000481641.1_1_2:201725957-201728949:-|nuORF;nc|ENSG00000013441|P49759-3|CLK1;ENST00000492793.1_1_2:201725957-201729378:-|nuORF;nc|ENSG00000013441|P49759-2|CLK1;ENST00000473565.5_1_2:201725957-201729352:-|nuORF;ENSG00000013441|ENST00000321356|CLK1	ENST00000481641.1_1_2:201725957-201728949:-|nuORF	ENST00000481641.1_1_2:201725957-201728949:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.9043273925781	3	468.904135	1403.69057	0.98522	0.00046197	-0.75423	-0.00035366	0.23099	0.00010831	468.90360049347595	17.92	0.48136	17.995	17.742	18.223	0.075441					34	14	4	0	0	0	0.62652	1	231	231		41.383	7.2961	1	72216			51562	12463	34493	34506	58233	58233					0.004876872213117167
RSINEKDYHSR	11	Unmodified	_RSINEKDYHSR_					0	0	0		ENST00000481641.1_1_2:201725957-201728949:-|nuORF;nc|ENSG00000013441|P49759-3|CLK1;ENST00000492793.1_1_2:201725957-201729378:-|nuORF;nc|ENSG00000013441|P49759-2|CLK1;ENST00000473565.5_1_2:201725957-201729352:-|nuORF;ENSG00000013441|ENST00000321356|CLK1	ENST00000481641.1_1_2:201725957-201728949:-|nuORF	ENST00000481641.1_1_2:201725957-201728949:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	468.904135	1403.69057	-0.068937	-3.2325E-05	-0.15747	-7.3838E-05	-0.22641	-0.00010616	468.9040349995036	18.23	0.33568	18.151	18.003	18.338	-0.078943	0.03785	-1.3598E-08	NaN	41.383	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62003			51563	12463	34493	34506							0.004876872213117167
RSINKLHEVL	10	Unmodified	_RSINKLHEVL_					0	0	0			REV__ENSG00000099256|ENST00000320152|PRTFDC1	REV__ENSG00000099256|ENST00000320152|PRTFDC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.1701965332031	3	403.575178	1207.70371	2.6348	0.0010633	-3.612	-0.0014577	-0.97728	-0.00039441	403.90792415197257	81.151	0.86516	81.207	80.732	81.597	0.055916					34	19	2	0	0	0	0.37624	1	8035	8035		28.081	12.748	1	76983	+		51564	17085	34494	34507	58234	58234					0.10816170071370834
RSINKLHEVL	10	Unmodified	_RSINKLHEVL_					0	0	0			REV__ENSG00000099256|ENST00000320152|PRTFDC1	REV__ENSG00000099256|ENST00000320152|PRTFDC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	403.575178	1207.70371	-0.18751	-7.5676E-05	-0.62493	-0.00025221	-0.81245	-0.00032788	403.5748884405621	80.952	0.80325	81.014	80.555	81.358	0.062233	-0.18751	0.00016923	NaN	32.751	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64798	+		51565	17085	34494	34507							0.10816170071370834
RSINKLHEVL	10	Unmodified	_RSINKLHEVL_					0	0	0			REV__ENSG00000099256|ENST00000320152|PRTFDC1	REV__ENSG00000099256|ENST00000320152|PRTFDC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	403.575178	1207.70371	0.31005	0.00012513	-1.0616	-0.00042845	-0.75159	-0.00030332	403.57465186057084	81.217	1.0621	81.158	80.494	81.556	-0.059692	-0.043951	-0.00035951	NaN	32.751	36	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87535	+		51566	17085	34494	34507							0.10816170071370834
RSIQDKPPIIL	11	Unmodified	_RSIQDKPPIIL_					0	0	0			REV__ENST00000360541.9_1_5:137854478-137854535:-|nuORF	REV__ENST00000360541.9_1_5:137854478-137854535:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3928833007812	2	640.390262	1278.76597	2.3199	0.0014856	1.8427	0.00118	4.1626	0.0026657	640.3913086567981	50.89	1.1946	51.642	51.12	52.315	0.75174					85	28	4	0	0	0	0.74763	1	5015	5015		22.58	1.6327	1	1438200	+		51567	18424	34495	34508	58235	58235					0.13773896419706944
RSIQEELQQL	10	Unmodified	_RSIQEELQQL_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.33642578125	2	622.335684	1242.65681	-0.27733	-0.0001726	1.3013	0.00080982	1.0239	0.00063722	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.8573	1	12164	12164		2.9294	0	1	419280			51568	7193	34496	34509	58236	58236					0.04519265729572908
RSIRRVIRWW	10	Unmodified	_RSIRRVIRWW_					0	0	0			REV__ENST00000373518.1_1_X:72347145-72347370:-|nuORF	REV__ENST00000373518.1_1_X:72347145-72347370:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.6241149902344	3	476.621345	1426.8422	-0.10097	-4.8125E-05	4.04	0.0019256	3.9391	0.0018774	476.6231885289285	107.88	0.27552	107.84	107.65	107.93	-0.042404					27	6	6	0	0	0	0.85259	1	11749	11749		20.03	6.5225	1	124990000	+		51569	25763	34497	34510	58237	58237					0.1458575783035485
RSKATGTK	8	Unmodified	_RSKATGTK_					0	0	0		ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.638916015625	2	424.751059	847.487565	1.2141	0.00051569	-2.8768	-0.0012219	-1.6627	-0.00070625	424.7500028118543	36.788	0.46056	37.274	37.201	37.662	0.48581					19	10	2	0	0	0	0.4196	1	2968	2968		9.7057	0	1	209630			51570	13702	34498	34511	58238	58238					0.057720339575212165
RSKATGTK	8	Unmodified	_RSKATGTK_					0	0	0		ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	424.751059	847.487565	-0.058294	-2.476E-05	-0.39979	-0.00016981	-0.45808	-0.00019457	424.7507564872493	37.209	0.62327	37.185	36.816	37.439	-0.023975	0.00042056	-2.5165E-05	NaN	9.7057	33	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188510			51571	13702	34498	34511							0.057720339575212165
RSKATGTK	8	Unmodified	_RSKATGTK_					0	0	0		ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	424.751059	847.487565	-0.99622	-0.00042314	0.30072	0.00012773	-0.6955	-0.00029541	424.7511054809387	37.169	0.44212	37.116	36.828	37.27	-0.053558	-0.069188	0.00056992	NaN	9.7057	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	250990			51572	13702	34498	34511							0.057720339575212165
RSKATGTK	8	Unmodified	_RSKATGTK_					0	0	0		ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	424.751059	847.487565	0.66966	0.00028444	-0.75153	-0.00031921	-0.081876	-3.4777E-05	424.75040751028126	37.119	0.40151	37.13	36.839	37.24	0.011173	-0.055257	-0.00032397	NaN	9.7057	35	8	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	232470			51573	13702	34498	34511							0.057720339575212165
RSKATGTK	8	Unmodified	_RSKATGTK_					0	0	0		ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	424.751059	847.487565	-1.817	-0.00077177	0.99098	0.00042092	-0.82603	-0.00035086	424.75133892741997	37.214	0.45414	37.237	36.911	37.365	0.023624	0.052403	0.0011563	NaN	9.7057	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162280			51574	13702	34498	34511							0.057720339575212165
RSKATGTK	8	Unmodified	_RSKATGTK_					0	0	0		ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	424.751059	847.487565	0.15875	6.7431E-05	-1.2231	-0.00051952	-1.0644	-0.00045209	424.7506088459546	37.075	0.39252	37.174	36.808	37.201	0.099277	-0.010713	-0.00072459	NaN	9.7057	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161360			51575	13702	34498	34511							0.057720339575212165
RSKATGTK	8	Unmodified	_RSKATGTK_					0	0	0		ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	ENST00000553612.5_1_14:81646375-81646465:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	424.751059	847.487565	-0.054556	-2.3173E-05	0.76435	0.00032466	0.7098	0.00030149	424.7505909829682	37.213	0.77166	37.153	36.631	37.403	-0.060333	-0.03207	0.00096377	NaN	9.7057	31	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	157190			51576	13702	34498	34511							0.057720339575212165
RSKAWPRTAL	10	Unmodified	_RSKAWPRTAL_					0	0	0			REV__ENST00000481476.1_1_9:132501610-132501871:-|nuORF	REV__ENST00000481476.1_1_9:132501610-132501871:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	593.344482421875	2	593.346189	1184.67783	-0.22642	-0.00013434	-2.3776	-0.0014107	-2.604	-0.0015451	593.3446713104415	103.73	2.3003	103.73	103.29	105.59	0					144	55	4	0	0	0	0.86802	1	10618	10618		27.047	0.3544	1	1751500	+		51577	27442	34499	34512	58239	58239					0.09287320619773709
RSKGALGKGT	10	Unmodified	_RSKGALGKGT_					0	0	0		ENST00000378743.7_1_12:72057501-72057615:-|nuORF	ENST00000378743.7_1_12:72057501-72057615:-|nuORF	ENST00000378743.7_1_12:72057501-72057615:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7911071777344	2	487.790715	973.566878	0.6235	0.00030414	-1.3362	-0.00065176	-0.71266	-0.00034763	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.73395	1	7963	7963		42.864	2.0861	1	479320			51578	10873	34500	34513	58240	58240					0.07903680911670108
RSKGMVIL	8	Unmodified	_RSKGMVIL_					0	0	0		ENST00000342315.8_1_12:113446948-113448207:+|nuORF	ENST00000342315.8_1_12:113446948-113448207:+|nuORF	ENST00000342315.8_1_12:113446948-113448207:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.276611328125	2	452.275855	902.537157	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.489	1	54.463	53.963	54.963	-0.025955								0	0	0	0.29816	1	4917	4917		38.806	6.8513	1				51579	10258	34501	34514	58241	58241					0.08199025641965818
RSKGRTRR	8	Unmodified	_RSKGRTRR_					0	0	0		ENSG00000185290|ENST00000329309|NUPR2	ENSG00000185290|ENST00000329309|NUPR2	ENSG00000185290|ENST00000329309|NUPR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8150939941406	2	508.812848	1015.61114	-0.9437	-0.00048017	3.99	0.0020302	3.0463	0.00155	508.814896871399	43.452	2.9729	44.226	43.866	46.839	0.77379					192	73	5	0	0	0	0.83456	1	4035	4035		60.972	2.19	1	100420000			51580	7698	34502	34515	58242	58242					0.10396129848504643
RSKGSSRRR	9	Unmodified	_RSKGSSRRR_					0	0	0			REV__ENST00000423241.6_1_2:201983266-201994474:+|nuORF	REV__ENST00000423241.6_1_2:201983266-201994474:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.5975952148438	2	545.321037	1088.62752	-0.040479	-2.2074E-05	2.4594	0.0013412	2.419	0.0013191	545.3219981567206	18.582	0.25665	17.96	17.859	18.115	-0.62141					9	5	2	0	0	0	0.20789	1	404	404		13.454	0	1	46173	+		51581	26507	34503	34516	58243	58243					0.08675211014610795
RSKIKEDPAP	10	Unmodified	_RSKIKEDPAP_					0	0	0			REV__ENSG00000105617|ENST00000222224|LENG1	REV__ENSG00000105617|ENST00000222224|LENG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.8229370117188	2	570.822212	1139.62987	-0.23349	-0.00013328	3.926	0.0022411	3.6925	0.0021078	570.8242504843668	61.573	0.86258	61.603	61.338	62.201	0.029575					86	37	3	0	0	0	0.63899	1	5745	5745		47.96	5.6214	1	572170	+		51582	17557	34504	34517	58244	58244					0.06564201909031908
RSKINVYKR	9	Unmodified	_RSKINVYKR_					0	0	0		ENSG00000048162|ENST00000614830|NOP16	ENSG00000048162|ENST00000614830|NOP16	ENSG00000048162|ENST00000614830|NOP16	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.354248046875	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.39	1	114.37	113.87	114.87	-0.024452								0	0	0	0.33394	1	12674	12674		19.104	1.6355	1				51583	972	34505	34518	58245	58245					0.11863607136797327
RSKKIIKIVSF	11	Unmodified	_RSKKIIKIVSF_					0	0	0		ENST00000377461.8_1_19:48734941-48735010:-|nuORF	ENST00000377461.8_1_19:48734941-48735010:-|nuORF	ENST00000377461.8_1_19:48734941-48735010:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.29217529296875	3	440.29049	1317.84964	0.37062	0.00016318	3.9393	0.0017344	4.3099	0.0018976	440.29198732058745	59.638	1.194	59.752	59.25	60.444	0.11396					105	36	4	0	0	0	0.76892	1	5135	5135		17.833	7.2463	1	260900			51584	10837	34506	34519	58246	58246					0.20343052587395505
RSKKLYYI	8	Unmodified	_RSKKLYYI_					0	0	0			REV__ENSG00000162407|ENST00000371250|PLPP3	REV__ENSG00000162407|ENST00000371250|PLPP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	535.8239135742188	2	535.821484	1069.62842	0.0092352	4.9484E-06	1.5017	0.00080463	1.5109	0.00080958	535.8220639150398	50.999	1.5379	50.976	49.988	51.526	-0.02343					72	42	2	0	0	0	0.8347	1	4439	4439		23.042	4.7181	1	246980	+		51585	20810	34507	34520	58247	58247					0.09638612610956443
RSKKLYYI	8	Unmodified	_RSKKLYYI_					0	0	0			REV__ENSG00000162407|ENST00000371250|PLPP3	REV__ENSG00000162407|ENST00000371250|PLPP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	535.8212280273438	2	535.821484	1069.62842	0.38941	0.00020866	1.2122	0.00064951	1.6016	0.00085816	535.8218981017096	51.04	1.2469	51.089	50.465	51.711	0.0499					73	38	3	0	0	0	0.82658	1	4055	4055		21.96	0	1	279380	+		51586	20810	34507	34520	58248	58248					0.09638612610956443
RSKKLYYI	8	Unmodified	_RSKKLYYI_					0	0	0			REV__ENSG00000162407|ENST00000371250|PLPP3	REV__ENSG00000162407|ENST00000371250|PLPP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	535.8212280273438	2	535.821484	1069.62842	0.39838	0.00021346	1.2532	0.00067149	1.6516	0.00088495	535.8218887687495	52.205	2.2525	52.265	51.106	53.359	0.059719					72	31	3	0	0	0	0.4196	1	4055	4055		21.96	9.753	1	207870	+		51587	20810	34507	34520	58249	58249					0.09638612610956443
RSKLFKRSET	10	Unmodified	_RSKLFKRSET_					0	0	0			REV__ENST00000471919.1_1_6:116981518-116989864:-|nuORF	REV__ENST00000471919.1_1_6:116981518-116989864:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92236328125	3	417.910449	1250.70952	-1.8945	-0.00079173	2.3508	0.00098241	0.45625	0.00019067	418.24566406735846	105.29	0.5117	105.36	105.14	105.65	0.073112					18	12	2	0	0	0	0.37624	1	11165	11165		6.3209	0	1	236650	+		51588	20363	34508	34521	58250	58250					0.0941926858304214
RSKLHGAS	8	Unmodified	_RSKLHGAS_					0	0	0			REV__nc|ENSG00000115761|Q9BSC4-2|NOL10	REV__nc|ENSG00000115761|Q9BSC4-2|NOL10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2615051269531	2	428.243401	854.472249	-0.97811	-0.00041887	3.7559	0.0016084	2.7778	0.0011896	428.24466353644095	90.83	0.23608	91.301	91.124	91.36	0.47068					10	5	3	0	0	0	0.4196	1	10785	10785		30.318	9.8359	1	179770	+		51589	18150	34509	34522	58251	58251					0.039191671603248324
RSKLHGAS	8	Unmodified	_RSKLHGAS_					0	0	0			REV__nc|ENSG00000115761|Q9BSC4-2|NOL10	REV__nc|ENSG00000115761|Q9BSC4-2|NOL10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2615051269531	2	428.243401	854.472249	-0.61377	-0.00026284	4.1111	0.0017605	3.4973	0.0014977	428.24501773502834	91.794	1.0256	92.256	91.891	92.917	0.46249					34	23	2	0	0	0	0.4196	1	10907	10907		24.519	2.8169	1	215370	+		51590	18150	34509	34522	58252	58252					0.039191671603248324
RSKLHGAS	8	Unmodified	_RSKLHGAS_					0	0	0			REV__nc|ENSG00000115761|Q9BSC4-2|NOL10	REV__nc|ENSG00000115761|Q9BSC4-2|NOL10	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	428.243401	854.472249	1.2914	0.00055303	2.2262	0.00095336	3.5176	0.0015064	428.2442588075821	91.795	1.0663	92.244	91.756	92.822	0.44958	-0.0058561	-0.00065822	NaN	24.519	48	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	264550	+		51591	18150	34509	34522							0.039191671603248324
RSKLLESLHKV	11	Unmodified	_RSKLLESLHKV_					0	0	0			REV__nc|ENSG00000186231|Q96NJ5-3|KLHL32	REV__nc|ENSG00000186231|Q96NJ5-3|KLHL32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2674255371094	3	437.269866	1308.78777	-0.68964	-0.00030156	-4.0468	-0.0017696	-4.7365	-0.0020711	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.76087	1	4947	4947		19.627	1.7938	1	2651700	+		51592	22838	34510	34523	58253	58253					0.14572701168253843
RSKLLESLHKV	11	Unmodified	_RSKLLESLHKV_					0	0	0			REV__nc|ENSG00000186231|Q96NJ5-3|KLHL32	REV__nc|ENSG00000186231|Q96NJ5-3|KLHL32	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.267578125	3	437.269866	1308.78777	-1.575	-0.00068869	-2.9633	-0.0012958	-4.5383	-0.0019845	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.73277	1	4070	4070		25.892	5.8612	1	3429700	+		51593	22838	34510	34523	58254	58254					0.14572701168253843
RSKLWKALLV	10	Unmodified	_RSKLWKALLV_					0	0	0		ENST00000327490.7_1_17:74266941-74267184:+|nuORF	ENST00000327490.7_1_17:74266941-74267184:+|nuORF	ENST00000327490.7_1_17:74266941-74267184:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	607.732177734375	2	607.392608	1212.77066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.66	1	26.727	26.227	27.227	0.066877								0	0	0	0.45132	1	1022	1022		21.96	0	1				51594	10088	34511	34524	58255	58255					0.17278825353128013
RSKMEAAGFT	10	Unmodified	_RSKMEAAGFT_					0	0	0		ENSG00000100116|ENST00000248924|GCAT;nc|ENSG00000100116|O75600-2|GCAT	ENSG00000100116|ENST00000248924|GCAT	ENSG00000100116|ENST00000248924|GCAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.2711791992188	2	549.274041	1096.53353	-0.1749	-9.6065E-05	-4.3707	-0.0024007	-4.5456	-0.0024968	549.2716195145375	43.695	0.73362	43.668	43.317	44.05	-0.026764					25	17	2	0	0	0	0.54701	1	3354	3354		52.937	3.4952	1	227470			51595	1798	34512	34525	58256	58256					-0.01087688922552843
RSKNGFHLHL	10	Unmodified	_RSKNGFHLHL_					0	0	0		nc|ENSG00000142973|P13584|CYP4B1;ENSG00000142973|ENST00000371923|CYP4B1	nc|ENSG00000142973|P13584|CYP4B1	nc|ENSG00000142973|P13584|CYP4B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.56036376953125	3	403.559751	1207.65742	-0.38238	-0.00015431	1.0711	0.00043226	0.68873	0.00027794	403.56005878614496	22.792	0.9348	22.733	22.419	23.353	-0.058668					76	31	3	0	0	0	0.86106	1	739	739		33.922	3.3528	1	169720			51596	4594	34513	34526	58257	58257					0.06190149959957125
RSKPRENL	8	Unmodified	_RSKPRENL_					0	0	0			REV__nc|ENSG00000103197|P49815-7|TSC2	REV__nc|ENSG00000103197|P49815-7|TSC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.7471618652344	2	500.28834	998.562127	0.097862	4.8959E-05	3.2506	0.0016262	3.3485	0.0016752	500.2897541053792	74.951	0.37358	75.516	75.33	75.704	0.56458					13	8	2	0	0	0	0.4196	1	8488	8488		13.454	0	1	105390	+		51597	29750	34514	34527	58258	58258					0.06278796768901884
RSKQLLTQW	9	Unmodified	_RSKQLLTQW_					0	0	0		nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;ENSG00000117600|ENST00000370185|PLPPR4;nc|ENSG00000117600|Q7Z2D5|PLPPR4;chr1:99300966-99305685|28|13.14|0.6|4.45|+|ENST00000457765|PLPPR4,PLPPR4;nc|ENSG00000117600|Q7Z2D5-3|PLPPR4	nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.3328857421875	2	580.332747	1158.65094	0.35844	0.00020801	-0.70205	-0.00040742	-0.34361	-0.00019941	580.3322580000553	39.826	0.82263	39.779	39.423	40.245	-0.04789					54	21	4	0	0	0	0.38563	1	2467	2467		58.782	0	1	1097600			51598	2989	34515	34528	58259	58259					0.07796212008565817
RSKRKQKTIP	10	Unmodified	_RSKRKQKTIP_					0	0	0		ENST00000416382.6_1_10:11373873-11374074:+|nuORF	ENST00000416382.6_1_10:11373873-11374074:+|nuORF	ENST00000416382.6_1_10:11373873-11374074:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3937377929688	2	621.39367	1240.77279	1.3	0.00080781	-2.832	-0.0017598	-1.532	-0.00095195	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.85958	1	11224	11224		15.642	0	1	23079000			51599	11394	34516	34529	58260	58260					0.1620325409094221
RSKRQLRRYPR	11	Unmodified	_RSKRQLRRYPR_					0	0	0		nc|ENSG00000008277|Q9P0K1-4|ADAM22;nc|ENSG00000008277|Q9P0K1-3|ADAM22;nc|ENSG00000008277|Q9P0K1-5|ADAM22;nc|ENSG00000008277|Q9P0K1-2|ADAM22;nc|ENSG00000008277|Q9P0K1|ADAM22;ENSG00000008277|ENST00000413139|ADAM22	nc|ENSG00000008277|Q9P0K1-4|ADAM22	nc|ENSG00000008277|Q9P0K1-4|ADAM22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.3105163574219	3	505.974558	1514.90185	0.14933	7.5555E-05	-0.67976	-0.00034394	-0.53044	-0.00026839	505.97413818936155	107.88	0.86302	107.92	107.11	107.97	0.035622					68	20	5	0	0	0	0.76251	1	11817	11817		19.263	2.7328	1	155850000			51600	738	34517	34530	58261	58261					0.1649902877375098
RSKRTPKPLI	10	Unmodified	_RSKRTPKPLI_					0	0	0			REV__ENSG00000171863|ENST00000645674|RPS7	REV__ENSG00000171863|ENST00000645674|RPS7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.3842163085938	2	598.385314	1194.75608	-0.54624	-0.00032686	-2.478	-0.0014828	-3.0242	-0.0018097	598.3819722299027	43.646	0.99969	43.61	43.102	44.101	-0.035816					50	23	3	0	0	0	0.86047	1	3446	3446		23.523	2.5758	1	68045	+		51601	21781	34518	34531	58262	58262					0.16648753204981404
RSKRTPKPLI	10	Unmodified	_RSKRTPKPLI_					0	0	0			REV__ENSG00000171863|ENST00000645674|RPS7	REV__ENSG00000171863|ENST00000645674|RPS7	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	598.385314	1194.75608	-0.54624	-0.00032686	-2.478	-0.0014828	-3.0242	-0.0018097	598.3819722299027	43.646	0.99969	43.61	43.102	44.101	-0.035816	-0.039889	0.0006622	NaN	23.523	50	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68045	+		51602	21781	34518	34531							0.16648753204981404
RSKRTPKPLI	10	Unmodified	_RSKRTPKPLI_					0	0	0			REV__ENSG00000171863|ENST00000645674|RPS7	REV__ENSG00000171863|ENST00000645674|RPS7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	598.385314	1194.75608	-1.8856	-0.0011283	-1.556	-0.00093109	-3.4416	-0.0020594	598.3827387581185	43.765	0.76168	43.762	43.326	44.087	-0.002449	0.11232	0.0017656	NaN	23.523	39	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110550	+		51603	21781	34518	34531							0.16648753204981404
RSKRTPKPLI	10	Unmodified	_RSKRTPKPLI_					0	0	0			REV__ENSG00000171863|ENST00000645674|RPS7	REV__ENSG00000171863|ENST00000645674|RPS7	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	598.385314	1194.75608	0.38227	0.00022875	-4.6712	-0.0027952	-4.2889	-0.0025664	598.8845354199952	43.521	0.19881	43.577	43.44	43.638	0.056747	-0.072433	-0.0019626	NaN	23.523	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52922	+		51604	21781	34518	34531							0.16648753204981404
RSKRVEPRAQS	11	Unmodified	_RSKRVEPRAQS_					0	0	0			REV__ENST00000548477.5_1_12:113772575-113772905:-|nuORF	REV__ENST00000548477.5_1_12:113772575-113772905:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.5859375	3	438.584736	1312.73238	-1.997	-0.00087587	4.1249	0.0018091	2.1279	0.00093326	438.58651601334884	31.993	0.97123	31.993	31.701	32.672	0					74	39	2	0	0	0	0.69687	1	1616	1616		32.034	7.8023	1	798930	+		51605	28573	34519	34532	58263	58263					0.08852287700528905
RSKSKAVG	8	Unmodified	_RSKSKAVG_					0	0	0			REV__ENSG00000188573|ENST00000338333|FBLL1	REV__ENSG00000188573|ENST00000338333|FBLL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.7539367675781	2	416.753601	831.49265	0.44827	0.00018682	3.2079	0.0013369	3.6562	0.0015237	416.75482420878427	69.04	0.8387	69.169	68.79	69.629	0.12838					83	36	3	0	0	0	0.82658	1	6213	6213		21.96	0.25755	1	1117600	+		51606	23013	34520	34533	58264	58264					0.07016337820141416
RSKSLKEGL	9	Unmodified	_RSKSLKEGL_					0	0	0		ENSG00000133030|ENST00000651222|MPRIP;nc|ENSG00000133030|Q6WCQ1-3|MPRIP;nc|ENSG00000133030|Q6WCQ1-2|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.3058776855469	2	509.306198	1016.59784	-1.5847	-0.00080708	0.89267	0.00045464	-0.692	-0.00035244	509.30651405671495	92.924	1.4274	93.116	92.648	94.076	0.19238					107	33	5	0	0	0	0.77696	1	9377	9377		31.53	2.3598	1	2014700			51607	3850	34521	34534	58265	58265					0.09020834225896124
RSKSVREL	8	Unmodified	_RSKSVREL_					0	0	0		nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7918395996094	2	487.790715	973.566878	-1.4525	-0.00070854	0.96091	0.00046872	-0.49164	-0.00023982	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.87064	1	7695	7695		29.15	0	1	503530			51608	5087	34522	34535	58266	58266					0.07903680911670108
RSKTYPKRIA	10	Unmodified	_RSKTYPKRIA_					0	0	0		ENSG00000129595|ENST00000261486|EPB41L4A	ENSG00000129595|ENST00000261486|EPB41L4A	ENSG00000129595|ENST00000261486|EPB41L4A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	407.9098815917969	3	407.247173	1218.71969	0.012695	5.1699E-06	-1.553	-0.00063244	-1.5403	-0.00062727	407.2463425759878	15.948	0.2175	16.007	15.931	16.148	0.059269					15	8	2	0	0	0	0.37624	1	105	105		10.587	5.9742	1	58964			51609	3596	34523	34536	58267	58267					0.11907876308282539
RSKVKYFV	8	Unmodified	_RSKVKYFV_					0	0	0			REV__ENSG00000156030|ENST00000423556|MIDEAS	REV__ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8073120117188	2	513.808377	1025.6022	-1.4174	-0.00072826	2.551	0.0013107	1.1336	0.00058246	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.87064	1	4182	4182		29.15	0	1	1977600	+		51610	20463	34524	34537	58268	58268					0.09042343439477918
RSKVKYFV	8	Unmodified	_RSKVKYFV_					0	0	0			REV__ENSG00000156030|ENST00000423556|MIDEAS	REV__ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8092041015625	2	513.808377	1025.6022	0.14837	7.6233E-05	1.0682	0.00054883	1.2165	0.00062507	513.8088134492856	48.067	1.4161	48.057	47.714	49.13	-0.0093269					122	36	4	0	0	0	0.87922	1	3940	3940		31.955	1.4512	1	1557500	+		51611	20463	34524	34537	58269	58269					0.09042343439477918
RSKVKYFV	8	Unmodified	_RSKVKYFV_					0	0	0			REV__ENSG00000156030|ENST00000423556|MIDEAS	REV__ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8084716796875	2	513.808377	1025.6022	-0.47161	-0.00024232	1.6041	0.00082419	1.1325	0.00058187	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.86288	1	4088	4088		26.796	2.2769	1	1552900	+		51612	20463	34524	34537	58270	58270					0.09042343439477918
RSKVKYFV	8	Unmodified	_RSKVKYFV_					0	0	0			REV__ENSG00000156030|ENST00000423556|MIDEAS	REV__ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8088989257812	2	513.808377	1025.6022	0.34332	0.0001764	0.75485	0.00038785	1.0982	0.00056425	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.87064	1	3640	3640		29.15	2.4566	1	1306000	+		51613	20463	34524	34537	58271	58271					0.09042343439477918
RSKVKYFV	8	Unmodified	_RSKVKYFV_					0	0	0			REV__ENSG00000156030|ENST00000423556|MIDEAS	REV__ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8089599609375	2	513.808377	1025.6022	-0.30203	-0.00015519	1.5478	0.00079525	1.2457	0.00064007	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.87922	1	4234	4234		31.955	7.7521	1	861580	+		51614	20463	34524	34537	58272	58272					0.09042343439477918
RSKVKYFV	8	Unmodified	_RSKVKYFV_					0	0	0			REV__ENSG00000156030|ENST00000423556|MIDEAS	REV__ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.808837890625	2	513.808377	1025.6022	-0.47838	-0.0002458	1.7183	0.00088287	1.2399	0.00063707	513.8090681534527	46.11	2.0095	46.581	45.725	47.735	0.47139					108	48	3	0	0	0	0.86288	1	4335	4335		26.796	1.3459	1	5264100	+		51615	20463	34524	34537	58273	58273					0.09042343439477918
RSKVKYFV	8	Unmodified	_RSKVKYFV_					0	0	0			REV__ENSG00000156030|ENST00000423556|MIDEAS	REV__ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8095092773438	2	513.808377	1025.6022	-0.57846	-0.00029722	2.2736	0.0011682	1.6952	0.000871	513.8095113148362	46.467	0.72382	47.39	47.191	47.915	0.92315					30	16	2	0	0	0	0.86791	1	4388	4388		28.254	0.37203	1	5287500	+		51616	20463	34524	34537	58274	58274					0.09042343439477918
RSLADRVAG	9	Unmodified	_RSLADRVAG_					0	0	0		ENST00000525768.5_1_11:65628193-65628496:+|nuORF;ENST00000308110.8_1_11:65628088-65628496:+|nuORF	ENST00000525768.5_1_11:65628193-65628496:+|nuORF	ENST00000525768.5_1_11:65628193-65628496:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7674255371094	2	472.76724	943.519927	-1.1355	-0.00053681	1.1341	0.00053614	-0.0014011	-6.6241E-07	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.76764	1	8083	8083		34.173	2.6427	1	292450			51617	9883	34525	34538	58275	58275					0.04590821360523023
RSLAMEKIKCF	11	Unmodified	_RSLAMEKIKCF_					0	0	0		ENSG00000076685|ENST00000404739|NT5C2;nc|ENSG00000076685|P49902-2|NT5C2;ENST00000369857.8_1_10:104871551-104953027:-|nuORF	ENSG00000076685|ENST00000404739|NT5C2	ENSG00000076685|ENST00000404739|NT5C2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7874755859375	3	442.573792	1324.69955	0.22157	9.8061E-05	0.063758	2.8218E-05	0.28533	0.00012628	442.57384035699414	42.885	0.3625	42.95	42.758	43.121	0.065033					20	9	3	0	0	0	0.17273	1	2913	2913		12.957	0	1	85838			51618	1364	34526	34539	58276	58276					0.05018621261797307
RSLAMEKIKCF	11	Unmodified	_RSLAMEKIKCF_					0	0	0		ENSG00000076685|ENST00000404739|NT5C2;nc|ENSG00000076685|P49902-2|NT5C2;ENST00000369857.8_1_10:104871551-104953027:-|nuORF	ENSG00000076685|ENST00000404739|NT5C2	ENSG00000076685|ENST00000404739|NT5C2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78729248046875	3	442.573792	1324.69955	-0.19548	-8.6514E-05	0.75633	0.00033473	0.56085	0.00024822	442.5737702531695	42.895	0.41675	42.845	42.64	43.057	-0.050308					21	10	3	0	0	0	0.1751	1	2929	2929		35.178	10.946	1	89811			51619	1364	34526	34539	58277	58277					0.05018621261797307
RSLARSLRH	9	Unmodified	_RSLARSLRH_					0	0	0		ENST00000568500.1_1_16:30709907-30710114:-|nuORF	ENST00000568500.1_1_16:30709907-30710114:-|nuORF	ENST00000568500.1_1_16:30709907-30710114:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.32958984375	2	548.328331	1094.64211	1.0295	0.00056451	1.2942	0.00070966	2.3237	0.0012742	548.3288715539239	27.829	1.1657	27.575	27.152	28.318	-0.25465					90	27	5	0	0	0	0.77244	1	1717	1717		32.812	0	1	1628800			51620	13962	34527	34540	58278	58278					0.09857283162773456
RSLCATKG	8	Unmodified	_RSLCATKG_					0	0	0			REV__ENSG00000094804|ENST00000209728|CDC6	REV__ENSG00000094804|ENST00000209728|CDC6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2396545410156	2	418.226362	834.438172	1.1117	0.00046494	1.3113	0.00054843	2.423	0.0010134	418.22680345325637	88.17	0.97221	88.619	88.228	89.2	0.44893					40	23	2	0	0	0	0.4196	1	10391	10391		14.865	7.1746	1	180210	+		51621	17045	34528	34541	58279	58279					0.014330026770608129
RSLCKLVL	8	Unmodified	_RSLCKLVL_					0	0	0			REV__ENSG00000153404|ENST00000637938|PLEKHG4B	REV__ENSG00000153404|ENST00000637938|PLEKHG4B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2880554199219	2	466.291505	930.568457	-1.3157	-0.00061351	-2.0254	-0.00094445	-3.3412	-0.001558	466.29039897325373	74.355	0.67729	74.355	74.138	74.815	0					55	29	3	0	0	0	0.91472	1	6684	6684		44.117	5.3107	1	318180	+		51622	20348	34529	34542	58280	58280					0.10039598676041805
RSLCPALGLL	10	Unmodified	_RSLCPALGLL_					0	0	0		ENSG00000188306|ENST00000340806|LRRIQ4	ENSG00000188306|ENST00000340806|LRRIQ4	ENSG00000188306|ENST00000340806|LRRIQ4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.8060302734375	2	521.807519	1041.60049	-0.11311	-5.9022E-05	-2.6959	-0.0014067	-2.809	-0.0014658	521.8059245005005	44.852	1.3013	45.315	44.578	45.88	0.46313					77	31	3	0	0	0	0.64457	1	4163	4163		47.657	1.7054	1	1090800			51623	7920	34530	34543	58281	58281					0.0813496635919364
RSLDQIPGY	9	Unmodified	_RSLDQIPGY_					0	0	0		nc|ENSG00000090534|P40225-3|THPO;nc|ENSG00000090534|P40225-2|THPO;ENSG00000090534|ENST00000647395|THPO	nc|ENSG00000090534|P40225-3|THPO	nc|ENSG00000090534|P40225-3|THPO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.77490234375	2	524.774731	1047.53491	0.31757	0.00016665	-0.98814	-0.00051855	-0.67057	-0.0003519	524.7742180643073	46.698	0.71379	46.694	46.413	47.127	-0.0041618					38	17	3	0	0	0	0.67345	1	3809	3809		42.396	0.96952	1	419590			51624	1648	34531	34544	58282	58282					0.013042684378660852
RSLDSPAALA	10	Unmodified	_RSLDSPAALA_					0	0	0		ENSG00000147571|ENST00000276571|CRH	ENSG00000147571|ENST00000276571|CRH	ENSG00000147571|ENST00000276571|CRH	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.7750244140625	2	500.774731	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.642	1	50.551	50.051	51.051	-0.091797								0	0	0	0.45132	1	3991	3991		44.117	3.5442	1				51625	4911	34532	34545	58283	58283					0.035122684378507074
RSLEKSGF	8	Unmodified	_RSLEKSGF_					0	0	0		ENST00000521104.1_1_6:56504020-56557947:-|nuORF	ENST00000521104.1_1_6:56504020-56557947:-|nuORF	ENST00000521104.1_1_6:56504020-56557947:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.264892578125	2	462.250892	922.48723	0.69731	0.00032233	2.5767	0.0011911	3.274	0.0015134	462.25274062868436	93.157	1.2502	93.316	92.751	94.001	0.15875					62	29	3	0	0	0	0.4196	1	9449	9449		17.365	4.4058	1	137140			51626	13167	34533	34546	58284	58284					0.02288614237670572
RSLENAEQQ	9	Unmodified	_RSLENAEQQ_					0	0	0			REV__nc|ENSG00000112769|Q16363-2|LAMA4	REV__nc|ENSG00000112769|Q16363-2|LAMA4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7971801757812	2	537.762352	1073.51015	-1.5093	-0.00081165	-0.86539	-0.00046538	-2.3747	-0.001277	537.7617497653628	47.218	0.55794	48.141	47.871	48.429	0.92315					22	13	2	0	0	0	0.20789	1	4520	4520		52.937	5.2794	1	931190	+		51627	17965	34534	34547	58285	58285					-0.023664114355142374
RSLFLLLRYK	10	Unmodified	_RSLFLLLRYK_					0	0	0		ENST00000261167.6_1_12:14942052-14943608:-|nuORF	ENST00000261167.6_1_12:14942052-14943608:-|nuORF	ENST00000261167.6_1_12:14942052-14943608:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2676696777344	3	436.943202	1307.80778	0.80242	0.00035061	-2.0527	-0.0008969	-1.2503	-0.00054629	437.27739706118655	49.379	0.11762	50.224	50.154	50.272	0.84501					4	2	2	0	0	0	0.37624	1	4831	4831		17.167	0	1	58563			51628	9395	34535	34548	58286	58286					0.1661849689887731
RSLGPLLYL	9	Unmodified	_RSLGPLLYL_					0	0	0			REV__ENST00000531593.1_1_8:145139661-145140095:+|nuORF	REV__ENST00000531593.1_1_8:145139661-145140095:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.311279296875	2	516.316035	1030.61752	-0.2553	-0.00013181	-3.2452	-0.0016755	-3.5005	-0.0018073	516.3144185010789	103.22	1.1465	103.4	103.01	104.15	0.18298					74	28	3	0	0	0	0.7932	1	10990	10990		21.96	1.013	1	978380	+		51629	23275	34536	34549	58287	58287					0.10343210236646883
RSLGSSPVK	9	Unmodified	_RSLGSSPVK_					0	0	0		ENSG00000174718|ENST00000312561|RESF1	ENSG00000174718|ENST00000312561|RESF1	ENSG00000174718|ENST00000312561|RESF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.77191162109375	2	465.771991	929.529429	0.14869	6.9257E-05	-0.33497	-0.00015602	-0.18628	-8.6764E-05	465.77176518409055	22.695	1.1216	22.084	21.633	22.755	-0.6107					64	27	4	0	0	0	0.10914	1	950	950		90.601	0.23104	1	2567600			51630	6956	34537	34550	58288	58288					0.06184589646045424
RSLHLLSHP	9	Unmodified	_RSLHLLSHP_					0	0	0			REV__ENSG00000111671|ENST00000524270|SPSB2	REV__ENSG00000111671|ENST00000524270|SPSB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2936401367188	2	530.306532	1058.59851	-0.8786	-0.00046593	3.5491	0.0018821	2.6705	0.0014162	530.3081252708865	91.654	1.2971	92.116	91.233	92.53	0.46249					51	30	3	0	0	0	0.20789	1	10818	10818		51.335	5.3835	1	366660	+		51631	17884	34538	34551	58289	58289					0.0715567366560208
RSLHLRVLGR	10	Unmodified	_RSLHLRVLGR_					0	0	0		nc|ENSG00000109794|A5PLN7-2|FAM149A;ENST00000515078.5_1_4:187070333-187088439:+|nuORF;nc|ENSG00000109794|A5PLN7-4|FAM149A;ENSG00000109794|ENST00000706927|FAM149A;nc|ENSG00000109794|A5PLN7|FAM149A;ENST00000514829.5_1_4:187065816-187079198:+|nuORF	nc|ENSG00000109794|A5PLN7-2|FAM149A	nc|ENSG00000109794|A5PLN7-2|FAM149A	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	603.8787231445312	2	603.88073	1205.74691	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.571	1	20.615	20.115	21.115	0.043747								0	0	0	0.45132	1	501	501		14.137	0	1				51632	2486	34539	34552	58290	58290					0.15226404639292923
RSLHPLFL	8	Unmodified	_RSLHPLFL_					0	0	0			REV__ENST00000301633.8_1_17:76220872-76221046:+|nuORF	REV__ENST00000301633.8_1_17:76220872-76221046:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7928771972656	2	491.795269	981.575986	-1.1119	-0.00054683	2.4388	0.0011994	1.3269	0.00065256	491.79642278746286	73.027	0.75407	73.11	72.701	73.455	0.083138					42	26	2	0	0	0	0.86288	1	6676	6676		26.796	1.3459	1	82376	+		51633	24769	34540	34553	58291	58291					0.08446074267999393
RSLIFLFKEL	10	Unmodified	_RSLIFLFKEL_					0	0	0			REV__ENSG00000213160|ENST00000392647|KLHL23	REV__ENSG00000213160|ENST00000392647|KLHL23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.92626953125	3	422.592058	1264.75434	-0.68255	-0.00028844	2.8706	0.0012131	2.188	0.00092464	422.59313934575044	54.378	2.61	54.329	53.535	56.145	-0.049271					161	81	4	0	0	0	0.888	1	4561	4561		11.097	0.99287	1	1116400	+		51634	23609	34541	34554	58292	58292					0.13255699396381715
RSLIIPEEY	9	Unmodified	_RSLIIPEEY_					0	0	0			REV__ENST00000523192.1_1_8:95405967-95411786:-|nuORF	REV__ENST00000523192.1_1_8:95405967-95411786:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3033447265625	2	560.305864	1118.59717	-0.12855	-7.2027E-05	-0.094799	-5.3117E-05	-0.22335	-0.00012514	560.3057458651666	69.008	0.62858	69.555	69.239	69.868	0.54693					27	14	2	0	0	0	0.64922	1	7636	7636		44.117	1.7207	1	387810	+		51635	23215	34542	34555	58293	58293					0.04261994786179457
RSLIIPEEY	9	Unmodified	_RSLIIPEEY_					0	0	0			REV__ENST00000523192.1_1_8:95405967-95411786:-|nuORF	REV__ENST00000523192.1_1_8:95405967-95411786:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	560.305864	1118.59717	0.79267	0.00044414	-0.86781	-0.00048624	-0.075139	-4.2101E-05	560.305140321496	69.143	0.63201	69.527	69.139	69.771	0.38416	-0.013887	-0.00073712	NaN	44.117	27	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	328700	+		51636	23215	34542	34555							0.04261994786179457
RSLIIPEEY	9	Unmodified	_RSLIIPEEY_					0	0	0			REV__ENST00000523192.1_1_8:95405967-95411786:-|nuORF	REV__ENST00000523192.1_1_8:95405967-95411786:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	560.305864	1118.59717	-0.12855	-7.2027E-05	-0.094799	-5.3117E-05	-0.22335	-0.00012514	560.3057458651666	69.008	0.62858	69.555	69.239	69.868	0.54693	0.013887	0.00012912	NaN	44.117	27	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	387810	+		51637	23215	34542	34555							0.04261994786179457
RSLKELLLRLK	11	Unmodified	_RSLKELLLRLK_					0	0	0			REV__ENSG00000167701|ENST00000394955|GPT	REV__ENSG00000167701|ENST00000394955|GPT	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79144287109375	3	456.973161	1367.89765	-0.25153	-0.00011494	-2.3882	-0.0010914	-2.6398	-0.0012063	456.97389037560725	45.698	0.11117	45.629	45.579	45.69	-0.068634					4	2	2	0	0	0	0.17648	1	3310	3310		21.032	8.0748	1	21707	+		51638	21419	34543	34556	58294	58294					0.22842126507430294
RSLKLGPV	8	Unmodified	_RSLKLGPV_					0	0	0			REV__ENST00000325980.9_1_10:135054694-135055015:+|nuORF	REV__ENST00000325980.9_1_10:135054694-135055015:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.28033447265625	2	435.281995	868.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.211	1	68.233	67.733	68.733	0.021599								0	0	0	0.29631	1	6429	6429		25.45	4.9683	1		+		51639	25070	34544	34557	58295	58295					0.10990385376669565
RSLKLPAP	8	Unmodified	_RSLKLPAP_					0	0	0			REV__ENSG00000262655|ENST00000576479|SPON1	REV__ENSG00000262655|ENST00000576479|SPON1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2313537597656	2	441.281995	880.549437	-1.1286	-0.00049805	2.8297	0.0012487	1.7011	0.00075065	441.2829259815825	46.182	1.0929	46.654	45.968	47.061	0.47139					54	26	3	0	0	0	0.4196	1	4276	4276		12.959	0	1	808240	+		51640	23949	34545	34558	58296	58296					0.10438385376653514
RSLKPDFVLIR	11	Unmodified	_RSLKPDFVLIR_					0	0	0		nc|ENSG00000008056|P17600-2|SYN1;ENSG00000008056|ENST00000295987|SYN1	nc|ENSG00000008056|P17600-2|SYN1	nc|ENSG00000008056|P17600-2|SYN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6105651855469	3	448.610111	1342.8085	-1.3368	-0.0005997	-0.31575	-0.00014165	-1.6525	-0.00074135	448.60975879741926	77.285	1.2875	77.285	77.023	78.311	0					128	61	3	0	0	0	0.76892	1	7047	7047		17.833	3.7471	1	598490			51641	732	34546	34559	58297	58297					0.15081291547926412
RSLKQVAFPSV	11	Unmodified	_RSLKQVAFPSV_					0	0	0			REV__ENSG00000163214|ENST00000457308|DHX57	REV__ENSG00000163214|ENST00000457308|DHX57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	411.2455139160156	3	411.243429	1230.70846	-1.9177	-0.00078865	2.2542	0.00092704	0.33652	0.00013839	411.24413804538176	102.99	0.51112	103.11	102.84	103.35	0.11495					25	12	3	0	0	0	0.71803	1	10815	10815		28.577	0.93281	1	855770	+		51642	20890	34547	34560	58298	58298					0.10233054214131698
RSLKTIFYVF	10	Unmodified	_RSLKTIFYVF_					0	0	0			REV__nc|ENSG00000173821|Q63HN8|RNF213	REV__nc|ENSG00000173821|Q63HN8|RNF213	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	637.36865234375	2	637.368798	1272.72304	-0.10165	-6.4787E-05	2.7538	0.0017552	2.6522	0.0016904	637.3704665370327	105.92	2.1512	105.89	105.23	107.38	-0.025146					153	50	4	0	0	0	0.86718	1	11483	11483		27.882	1.8189	1	1622600	+		51643	21953	34548	34561	58299	58299					0.09759126362246207
RSLKVPQLLGK	11	Unmodified	_RSLKVPQLLGK_					0	0	0			REV__ENST00000464829.5_1_9:33469994-33473843:-|nuORF	REV__ENST00000464829.5_1_9:33469994-33473843:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76678466796875	3	413.602957	1237.78704	0.26848	0.00011104	3.6453	0.0015077	3.9137	0.0016187	413.6047377385338	49.204	0.55152	49.241	48.836	49.387	0.037735					17	12	2	0	0	0	0.17567	1	3762	3762		18.966	0	1	65910	+		51644	21169	34549	34562	58300	58300					0.1776590651920742
RSLKVPQLLGK	11	Unmodified	_RSLKVPQLLGK_					0	0	0			REV__ENST00000464829.5_1_9:33469994-33473843:-|nuORF	REV__ENST00000464829.5_1_9:33469994-33473843:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	413.602957	1237.78704	-0.44584	-0.0001844	2.4464	0.0010118	2.0005	0.00082742	413.6046023336197	48.021	0.31946	48.944	48.784	49.104	0.92315	-0.14866	-0.0010763	NaN	18.966	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66117	+		51645	21169	34549	34562							0.1776590651920742
RSLLLLAKAVQ	11	Unmodified	_RSLLLLAKAVQ_					0	0	0		ENST00000418411.6_1_12:113540888-113573291:-|nuORF;nc|ENSG00000111344|O95294-2|RASAL1;nc|ENSG00000111344|O95294|RASAL1;ENSG00000111344|ENST00000548055|RASAL1;nc|ENSG00000111344|O95294-3|RASAL1	ENST00000418411.6_1_12:113540888-113573291:-|nuORF	ENST00000418411.6_1_12:113540888-113573291:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9295959472656	3	404.599324	1210.77614	-0.81521	-0.00032983	-1.7387	-0.00070346	-2.5539	-0.0010333	404.5986518030221	48.037	1.4055	48.012	47.828	49.234	-0.025112					58	33	2	0	0	0	0.17586	1	4033	4033		16.53	11.31	1	212260			51646	2576	34550	34563	58301	58301					0.17918504144927283
RSLLPAGT	8	Unmodified	_RSLLPAGT_					0	0	0		ENST00000338797.10_1_19:18889924-18889990:+|nuORF	ENST00000338797.10_1_19:18889924-18889990:+|nuORF	ENST00000338797.10_1_19:18889924-18889990:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	407.7404479980469	2	407.742702	813.470852	-1.932	-0.00078778	-0.61922	-0.00025248	-2.5513	-0.0010403	407.7423235340561	24.055	0.64054	24.114	23.832	24.473	0.058167					43	28	2	0	0	0	0.81184	1	815	815		19.997	1.6724	1	59911			51647	10209	34551	34564	58302	58302					0.05665533071578466
RSLLPLGKNAF	11	Unmodified	_RSLLPLGKNAF_					0	0	0		nc|ENSG00000174963|Q8N9L1-3|ZIC4	nc|ENSG00000174963|Q8N9L1-3|ZIC4	nc|ENSG00000174963|Q8N9L1-3|ZIC4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2574768066406	3	405.91179	1214.71354	-0.54211	-0.00022005	-2.2273	-0.00090409	-2.7694	-0.0011241	405.91184463382365	48.978	0.26252	48.885	48.767	49.029	-0.093182					6	5	2	0	0	0	0.17273	1	3761	3761		12.957	2.8536	1	21481			51648	15108	34552	34565	58303	58303					0.11477358076740529
RSLLRPALKPT	11	Unmodified	_RSLLRPALKPT_					0	0	0		ENST00000587280.1_1_17:40704951-40705410:+|nuORF	ENST00000587280.1_1_17:40704951-40705410:+|nuORF	ENST00000587280.1_1_17:40704951-40705410:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92230224609375	3	417.934706	1250.78229	-1.8944	-0.00079173	3.1824	0.00133	1.288	0.00053831	417.9354688394502	105.79	0.27753	105.86	105.76	106.04	0.073112					9	6	2	0	0	0	0.17552	1	11213	11213		4.6433	0	1	76150			51649	14186	34553	34566	58304	58304					0.16693022376443878
RSLLWYKQEKK	11	Unmodified	_RSLLWYKQEKK_					0	0	0		nc|ENSG00000211815|A0A075B6V5|TRAV36DV7	nc|ENSG00000211815|A0A075B6V5|TRAV36DV7	nc|ENSG00000211815|A0A075B6V5|TRAV36DV7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.619140625	3	493.620788	1477.84053	-0.044384	-2.1909E-05	0.47	0.000232	0.42561	0.00021009	493.6209196316135	30.773	0.86895	30.776	30.448	31.317	0.0037212					49	19	4	0	0	0	0.76087	1	2069	2069		19.627	9.523	1	413490			51650	15238	34554	34567	58305	58305					0.12072659231034777
RSLLYVMG	8	Unmodified	_RSLLYVMG_					0	0	0		nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7598571777344	2	469.760038	937.505523	-1.0554	-0.00049577	2.1593	0.0010144	1.1039	0.00051859	469.7608617085479	40.328	1.2889	40.334	40.071	41.36	0.0065002					73	45	3	0	0	0	0.90465	1	2569	2569		40.573	1.7665	1	435990			51651	15264	34555	34568	58306	58306					0.03427032888021131
RSLNSTLSF	9	Unmodified	_RSLNSTLSF_					0	0	0			REV__nc|ENSG00000204396|Q9Y334-2|VWA7	REV__nc|ENSG00000204396|Q9Y334-2|VWA7	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.77685546875	2	512.774731	1023.53491	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.833	1	71.914	71.414	72.414	0.080032								0	0	0	0.30416	1	6531	6531		29.15	1.2673	1		+		51652	23488	34556	34569	58307	58307					0.02408268437852712
RSLNTDKLKE	10	Unmodified	_RSLNTDKLKE_					0	0	0			REV__ENST00000483428.1_1_9:125014204-125023774:-|nuORF	REV__ENST00000483428.1_1_9:125014204-125023774:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	601.8637084960938	2	602.338227	1202.6619	-0.06001	-3.6146E-05	2.1158	0.0012744	2.0558	0.0012383	602.339107618833	21.066	0.30164	20.437	20.374	20.676	-0.62835					10	8	2	0	0	0	0.37624	1	726	726		18.262	7.9968	1	26879	+		51653	27488	34557	34570	58308	58308					0.06867569592191103
RSLPESAAK	9	Unmodified	_RSLPESAAK_					0	0	0			REV__nc|ENSG00000184792|Q969R2-2|OSBP2	REV__nc|ENSG00000184792|Q969R2-2|OSBP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2305603027344	2	479.769448	957.524344	1.2389	0.00059437	-0.13132	-6.3004E-05	1.1076	0.00053137	479.7689434312765	19.559	0.37332	19.089	18.882	19.256	-0.46967					14	7	2	0	0	0	0.20789	1	550	550		16.473	6.2079	1	29504	+		51654	22702	34558	34571	58309	58309					0.043882857834205424
RSLPFFSAR	9	Unmodified	_RSLPFFSAR_					0	0	0		ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.8013916015625	2	540.801083	1079.58761	-0.095369	-5.1576E-05	-0.013542	-7.3236E-06	-0.10891	-5.8899E-05	540.800879373307	50.317	0.71403	50.315	49.991	50.705	-0.0020447					39	17	3	0	0	0	0.19861	1	4259	4259		74.165	12.058	1	274590			51655	6555	34559	34572	58310	58310					0.051002712913032155
RSLPFFSAR	9	Unmodified	_RSLPFFSAR_					0	0	0		ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.8016357421875	2	540.801083	1079.58761	0.13662	7.3883E-05	-0.2169	-0.0001173	-0.080287	-4.3419E-05	540.8007400536217	50.36	0.69245	50.336	49.988	50.68	-0.02343					38	15	3	0	0	0	0.29609	2	4357	4357;4368		65.157	7.1907	1	255710			51656	6555	34559	34572	58311;58312	58311					0.051002712913032155
RSLPFFSAR	9	Unmodified	_RSLPFFSAR_					0	0	0		ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.801025390625	2	540.801083	1079.58761	0.34608	0.00018716	-0.47224	-0.00025539	-0.12617	-6.8231E-05	540.800590860518	50.456	0.56704	50.463	50.125	50.692	0.0077438					31	12	3	0	0	0	0.11874	1	4300	4300		89.029	17.151	1	250740			51657	6555	34559	34572	58313	58313					0.051002712913032155
RSLPHFRNG	9	Unmodified	_RSLPHFRNG_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1;ENST00000584897.5_1_18:2726458-2784452:+|nuORF;nc|ENSG00000101596|A6NHR9-3|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2542724609375	2	542.293956	1082.57336	-1.4393	-0.00078051	-0.44641	-0.00024209	-1.8857	-0.0010226	542.2935881058066	29.642	0.51958	29.613	29.386	29.906	-0.029207					17	11	2	0	0	0	0.20789	1	1853	1853		29.15	8.2026	1	102880			51658	1951	34560	34573	58314	58314					0.03537618863038006
RSLPHFRNG	9	Unmodified	_RSLPHFRNG_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1;ENST00000584897.5_1_18:2726458-2784452:+|nuORF;nc|ENSG00000101596|A6NHR9-3|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	542.293956	1082.57336	0.00096308	5.2227E-07	-1.7401	-0.00094364	-1.7391	-0.00094312	542.2930244470252	29.852	0.47279	29.763	29.619	30.092	-0.089546	0.075106	-0.00080032	NaN	29.15	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107660			51659	1951	34560	34573							0.03537618863038006
RSLPHKKTHL	10	Unmodified	_RSLPHKKTHL_					0	0	0		nc|ENSG00000166206|P28472-4|GABRB3;nc|ENSG00000166206|P28472-3|GABRB3;nc|ENSG00000166206|P28472-2|GABRB3;ENSG00000166206|ENST00000311550|GABRB3	nc|ENSG00000166206|P28472-4|GABRB3	nc|ENSG00000166206|P28472-4|GABRB3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2482604980469	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.96	1	116.94	116.44	117.44	-0.02433								0	0	0	0.45132	1	12956	12956		20.03	2.1973	1				51660	6171	34561	34574	58315	58315					0.12079296028127828
RSLPLLTELGL	11	Unmodified	_RSLPLLTELGL_					0	0	0		ENST00000355653.7_1_17:41166726-41167353:-|nuORF	ENST00000355653.7_1_17:41166726-41167353:-|nuORF	ENST00000355653.7_1_17:41166726-41167353:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	606.3703002929688	2	606.371538	1210.72852	-0.46367	-0.00028116	-2.9355	-0.00178	-3.3992	-0.0020612	606.3696540978959	94.435	3.8289	94.503	93.215	97.044	0.068336					198	90	3	0	0	0	0.75164	1	9787	9787		21.686	6.8209	1	750990			51661	10355	34562	34575	58316	58316					0.13158805154057518
RSLPQSAL	8	Unmodified	_RSLPQSAL_					0	0	0			REV__nc|ENSG00000126246|Q9H665-2|IGFLR1	REV__nc|ENSG00000126246|Q9H665-2|IGFLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.2537841796875	2	436.253434	870.492316	0.73698	0.00032151	2.4525	0.0010699	3.1895	0.0013914	436.25453302910074	111.84	0.49524	111.91	111.59	112.09	0.069542					26	14	2	0	0	0	0.87922	1	12030	12030		31.955	0.42505	1	217290	+		51662	18698	34563	34576	58317	58317					0.051889181002820806
RSLPRGLRLP	10	Unmodified	_RSLPRGLRLP_					0	0	0			REV__ENSG00000269855|ENST00000601382|RNF225	REV__ENSG00000269855|ENST00000601382|RNF225	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8685302734375	2	582.869831	1163.72511	0.10187	5.9377E-05	-2.0182	-0.0011763	-1.9163	-0.0011169	582.8686105160244	102.31	0.9475	102.35	101.93	102.88	0.043198					58	22	4	0	0	0	0.8488	1	11056	11056		17.365	2.5001	1	776660	+		51663	23977	34564	34577	58318	58318					0.14979599890739337
RSLPRRRNPG	10	Unmodified	_RSLPRRRNPG_					0	0	0		nc|nan|A6NFR6|C5orf60	nc|nan|A6NFR6|C5orf60	nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.8578491210938	2	604.857786	1207.70102	-1.0601	-0.00064122	1.7701	0.0010707	0.70999	0.00042944	604.8590287609827	81.871	2.3278	81.986	81.043	83.371	0.11426					72	54	2	0	0	0	0.86549	1	7796	7796		24.519	15.336	1	398390			51664	15367	34565	34578	58319	58319					0.10547759457085704
RSLQIRQYA	9	Unmodified	_RSLQIRQYA_					0	0	0		ENSG00000177485|ENST00000557385|ZBTB33	ENSG00000177485|ENST00000557385|ZBTB33	ENSG00000177485|ENST00000557385|ZBTB33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.8159790039062	2	567.822547	1133.63054	0.7381	0.00041911	-1.2384	-0.00070321	-0.50033	-0.0002841	567.8215971977111	18.577	0.51444	18.1	17.796	18.311	-0.47694					17	10	3	0	0	0	0.78536	1	386	386		29.15	0	1	120180			51665	7144	34566	34579	58320	58320					0.06907041348745224
RSLQKKKNPL	10	Unmodified	_RSLQKKKNPL_					0	0	0		ENST00000297156.3_1_5:134086636-134086738:+|nuORF	ENST00000297156.3_1_5:134086636-134086738:+|nuORF	ENST00000297156.3_1_5:134086636-134086738:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.5876770019531	3	404.59094	1210.75099	-1.2934	-0.00052329	-3.8685	-0.0015652	-5.1619	-0.0020885	404.5892229323439	41.136	1.2646	41.095	40.508	41.772	-0.04081					80	34	3	0	0	0	0.85259	1	3084	3084		20.03	0.7678	1	339150			51666	9756	34567	34580	58321	58321					0.15404449342349835
RSLQKKKNPL	10	Unmodified	_RSLQKKKNPL_					0	0	0		ENST00000297156.3_1_5:134086636-134086738:+|nuORF	ENST00000297156.3_1_5:134086636-134086738:+|nuORF	ENST00000297156.3_1_5:134086636-134086738:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.58917236328125	3	404.59094	1210.75099	0.17885	7.236E-05	-4.4578	-0.0018036	-4.2789	-0.0017312	404.5890516543303	39.161	1.4029	39.25	38.65	40.053	0.088371					99	37	3	0	0	0	0.86446	1	2391	2391		30.569	7.191	1	306250			51667	9756	34567	34580	58322	58322					0.15404449342349835
RSLQLPRG	8	Unmodified	_RSLQLPRG_					0	0	0		ENST00000401985.3_1_5:179221106-179223480:+|nuORF	ENST00000401985.3_1_5:179221106-179223480:+|nuORF	ENST00000401985.3_1_5:179221106-179223480:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.7790832519531	2	463.780151	925.545748	-1.147	-0.00053196	-1.1857	-0.00054989	-2.3327	-0.0010818	463.7795203581368	39.498	0.37845	39.506	39.297	39.676	0.007618					15	9	2	0	0	0	0.92394	1	2422	2422		47.657	6.8792	1	213380			51668	11241	34568	34581	58323	58323					0.07999715602795732
RSLQSGRNRAR	11	Unmodified	_RSLQSGRNRAR_					0	0	0		ENST00000379656.7_1_19:18124000-18124147:+|nuORF	ENST00000379656.7_1_19:18124000-18124147:+|nuORF	ENST00000379656.7_1_19:18124000-18124147:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	3	434.248347	1299.72321	-0.12159	-5.2801E-05	-1.8569	-0.00080637	-1.9785	-0.00085917	434.247486066758	34.694	2.5074	34.689	33.382	35.89	-0.0047417					123	60	4	0	0	0	0.17497	1	2172	2172		25.068	0	1	226450			51669	10900	34569	34582	58324	58324					0.08533939134827051
RSLQWRNG	8	Unmodified	_RSLQWRNG_					0	0	0		ENST00000215555.6_1_19:8486899-8495545:+|nuORF;ENST00000381035.8_1_19:8491518-8503335:+|nuORF	ENST00000215555.6_1_19:8486899-8495545:+|nuORF	ENST00000215555.6_1_19:8486899-8495545:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.7552185058594	2	508.772857	1015.53116	0.077994	3.9681E-05	-1.5872	-0.00080752	-1.5092	-0.00076784	508.7720010142823	49.67	0.73777	50.13	49.789	50.527	0.45983					39	17	3	0	0	0	0.4196	1	4905	4905		20.947	0	1	1760400			51670	9113	34570	34583	58325	58325					0.02401643454652458
RSLRLPGG	8	Unmodified	_RSLRLPGG_					0	0	0		ENST00000078429.8_1_19:3121173-3121524:+|nuORF	ENST00000078429.8_1_19:3121173-3121524:+|nuORF	ENST00000078429.8_1_19:3121173-3121524:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.18890380859375	2	428.261594	854.508634	0.5523	0.00023653	-0.70549	-0.00030213	-0.15319	-6.5605E-05	428.26114931235816	95.057	1.536	95.477	95.02	96.556	0.41964					61	37	2	0	0	0	0.4196	1	11397	11397		29.15	0	1	270480			51671	9076	34571	34584	58326	58326					0.07556044057048439
RSLRLRIW	8	Unmodified	_RSLRLRIW_					0	0	0		chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3470458984375	2	550.345992	1098.67743	-0.21141	-0.00011635	-1.2535	-0.00068986	-1.4649	-0.00080621	550.3451049904395	16.584	0.53908	16.097	15.913	16.452	-0.48718					18	11	2	0	0	0	0.92457	1	175	175		47.916	1.9636	1	55392			51672	423	34572	34585	58327	58327					0.1320394569054315
RSLRLRIW	8	Unmodified	_RSLRLRIW_					0	0	0		chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	chr4:40335972-40337210|23|62.57|0.08|9.69|+|1|CHRNA9,CHRNA9|1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	550.345992	1098.67743	0.21245	0.00011692	-1.4982	-0.00082455	-1.2858	-0.00070763	550.3450876395437	16.591	0.48512	15.992	15.786	16.271	-0.59873	-0.052326	-0.00012144	NaN	47.916	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69449			51673	423	34572	34585							0.1320394569054315
RSLRLRPRLPV	11	Unmodified	_RSLRLRPRLPV_					0	0	0		ENST00000251102.12_1_16:57965650-57974178:-|nuORF	ENST00000251102.12_1_16:57965650-57974178:-|nuORF	ENST00000251102.12_1_16:57965650-57974178:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.96697998046875	3	454.965	1361.87317	0.25168	0.0001145	3.9066	0.0017774	4.1582	0.0018919	454.9666308327424	41.348	1.1666	41.317	40.993	42.16	-0.030987					84	29	4	0	0	0	0.79224	1	3014	3014		12.957	3.7457	1	651050			51674	9297	34573	34586	58328	58328					0.206709111445889
RSLRRLWLLE	10	Unmodified	_RSLRRLWLLE_					0	0	0			REV__ENSG00000165379|ENST00000298119|LRFN5	REV__ENSG00000165379|ENST00000298119|LRFN5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.2733459472656	3	447.941973	1340.80409	2.7482	0.001231	-3.594	-0.0016099	-0.84574	-0.00037884	447.9404717495489	112.37	0.50905	112.34	112.19	112.69	-0.025414					16	10	2	0	0	0	0.37624	1	12418	12418		14.086	0	1	287240	+		51675	21178	34574	34587	58329	58329					0.1473182712502421
RSLRRRIPR	9	Unmodified	_RSLRRRIPR_					0	0	0		ENST00000509702.5_1_4:23766811-23826805:-|nuORF	ENST00000509702.5_1_4:23766811-23826805:-|nuORF	ENST00000509702.5_1_4:23766811-23826805:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9292907714844	3	403.93029	1208.76904	0.077299	3.1223E-05	-2.0596	-0.00083192	-1.9823	-0.0008007	403.92940947651834	46.41	0.88675	46.396	45.871	46.758	-0.013821					41	22	2	0	0	0	0.7932	1	3739	3739		15.333	6.1213	1	1235300			51676	12995	34575	34588	58330	58330					0.1730062910773995
RSLSQLTVLLD	11	Unmodified	_RSLSQLTVLLD_					0	0	0			REV__nc|ENSG00000185164|Q5JPE7-3|NOMO2	REV__nc|ENSG00000185164|Q5JPE7-3|NOMO2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.8622436523438	2	622.864077	1243.7136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.32	1	99.32	98.82	99.82	0								0	0	0	0.56276	1	10028	10028		20.837	0.84038	1		+		51677	17397	34576	34589	58331	58331					0.10149313286069628
RSLSRAPLPRV	11	Unmodified	_RSLSRAPLPRV_					0	0	0		ENST00000291416.9_1_1:33647160-33647253:-|nuORF	ENST00000291416.9_1_1:33647160-33647253:-|nuORF	ENST00000291416.9_1_1:33647160-33647253:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.893798828125	2	626.385845	1250.75714	1.3724	0.00085963	-2.1489	-0.001346	-0.77651	-0.0004864	626.8865198460213	110.73	0.34553	110.85	110.64	110.99	0.11659					25	14	2	0	0	0	0.72739	1	11926	11926		27.047	4.4677	1	64300			51678	9681	34577	34590	58332	58332					0.1417896757386643
RSLSRAPSA	9	Unmodified	_RSLSRAPSA_					0	0	0			REV__ENST00000585609.1_1_19:11362793-11362910:-|nuORF	REV__ENST00000585609.1_1_19:11362793-11362910:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.76715087890625	2	472.76724	943.519927	-0.41041	-0.00019403	0.54101	0.00025577	0.1306	6.1745E-05	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.76764	1	8541	8541		34.173	1.3601	1	590200	+		51679	29092	34578	34591	58333	58333					0.045908213605116543
RSLSRGRGRLP	11	Unmodified	_RSLSRGRGRLP_					0	0	0		ENST00000587885.1_1_19:13264834-13265035:+|nuORF	ENST00000587885.1_1_19:13264834-13265035:+|nuORF	ENST00000587885.1_1_19:13264834-13265035:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8829345703125	2	627.878719	1253.74288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.84	1	113.84	113.34	114.34	0.0011978								0	0	0	0.56276	1	13739	13739		30.318	3.2704	1				51680	14200	34579	34592	58334	58334					0.12616315145623958
RSLSRPATG	9	Unmodified	_RSLSRPATG_					0	0	0			REV__ENST00000587885.1_1_19:13264834-13265035:+|nuORF	REV__ENST00000587885.1_1_19:13264834-13265035:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7672424316406	2	472.76724	943.519927	-1.1355	-0.00053681	1.1341	0.00053614	-0.0014011	-6.6241E-07	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.69624	1	8028	8028		40.778	5.1599	1	292450	+		51681	29132	34580	34593	58335	58335					0.04590821360523023
RSLSRPATG	9	Unmodified	_RSLSRPATG_					0	0	0			REV__ENST00000587885.1_1_19:13264834-13265035:+|nuORF	REV__ENST00000587885.1_1_19:13264834-13265035:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7668762207031	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.78983	1	8446	8446		27.882	3.3631	1	547170	+		51682	29132	34580	34593	58336	58336					0.04590821360523023
RSLSTLPSH	9	Unmodified	_RSLSTLPSH_					0	0	0			REV__ENST00000473501.1_1_3:196755203-196755518:-|nuORF	REV__ENST00000473501.1_1_3:196755203-196755518:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.74578857421875	2	499.274898	996.535243	-0.98788	-0.00049322	1.0842	0.0005413	0.096295	4.8078E-05	499.2753242615492	85.297	2.6718	85.297	83.323	85.994	0					96	63	3	0	0	0	0.20789	1	7817	7817		39.253	5.0803	1	180340	+		51683	27284	34581	34594	58337	58337					0.03683688157718734
RSLSTLPSH	9	Unmodified	_RSLSTLPSH_					0	0	0			REV__ENST00000473501.1_1_3:196755203-196755518:-|nuORF	REV__ENST00000473501.1_1_3:196755203-196755518:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	499.274898	996.535243	-0.53941	-0.00026931	0.58737	0.00029326	0.047958	2.3944E-05	499.275132976347	84.888	1.1203	85.064	84.574	85.694	0.17561	-0.067502	0.00035546	NaN	37.812	41	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188220	+		51684	27284	34581	34594							0.03683688157718734
RSLSTLPSH	9	Unmodified	_RSLSTLPSH_					0	0	0			REV__ENST00000473501.1_1_3:196755203-196755518:-|nuORF	REV__ENST00000473501.1_1_3:196755203-196755518:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	499.274898	996.535243	0.65761	0.00032833	-0.63965	-0.00031936	0.017961	8.9677E-06	499.2744876489768	84.885	3.7245	85.033	83.187	86.912	0.14857	-0.097903	-0.00086978	NaN	37.812	125	86	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	158150	+		51685	27284	34581	34594							0.03683688157718734
RSLTNRPLPRT	11	Unmodified	_RSLTNRPLPRT_					0	0	0			REV__ENSG00000218336|ENST00000511685|TENM3	REV__ENSG00000218336|ENST00000511685|TENM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.5930480957031	3	437.593232	1309.75787	-1.625	-0.00071111	2.758	0.0012069	1.133	0.00049578	437.5943775926199	17.133	0.5139	17.178	16.97	17.484	0.0457					57	22	4	0	0	0	0.74002	1	226	226		24.276	2.4955	1	252600	+		51686	23698	34582	34595	58338	58338					0.11537762222928905
RSLVVPAKI	9	Unmodified	_RSLVVPAKI_					0	0	0			REV__ENSG00000159650|ENST00000290868|UROC1	REV__ENSG00000159650|ENST00000290868|UROC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7950439453125	2	491.824027	981.633501	-0.51071	-0.00025118	-0.86097	-0.00042344	-1.3717	-0.00067462	491.82336790247666	54.631	0.5047	55.199	54.858	55.362	0.56836					15	11	2	0	0	0	0.20789	1	5540	5540		24.519	0	1	66896	+		51687	20672	34583	34596	58339	58339					0.14194916473547892
RSLWQVVYSK	10	Unmodified	_RSLWQVVYSK_					0	0	0			REV__ENSG00000087116|ENST00000251582|ADAMTS2	REV__ENSG00000087116|ENST00000251582|ADAMTS2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59228515625	3	422.571545	1264.69281	-0.17776	-7.5117E-05	3.3182	0.0014022	3.1404	0.001327	422.5728761709358	57.813	0.57647	57.783	57.527	58.104	-0.029865					18	14	2	0	0	0	0.37624	1	5322	5322		17.167	4.7339	1	53327	+		51688	16924	34584	34597	58340	58340					0.07104767697092029
RSLWRLEPLR	10	Unmodified	_RSLWRLEPLR_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.598876953125	3	442.598206	1324.77279	0.024928	1.1033E-05	2.8968	0.0012821	2.9218	0.0012932	442.5993953394859	48.793	1.7302	48.787	48.257	49.987	-0.0056381					90	39	3	0	0	0	0.57305	1	4042	4042		51.528	7.877	1	339270			51689	8027	34585	34598	58341	58341					0.12339254090920804
RSLWRLEPLR	10	Unmodified	_RSLWRLEPLR_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.5992126464844	3	442.598206	1324.77279	-0.78529	-0.00034757	3.7988	0.0016813	3.0135	0.0013338	442.5997035886443	48.9	1.7146	48.875	48.139	49.854	-0.025112					92	38	3	0	0	0	0.76747	1	4174	4174		41.08	8.3295	1	323300			51690	8027	34585	34598	58342	58342					0.12339254090920804
RSLWRLEPLR	10	Unmodified	_RSLWRLEPLR_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.5993347167969	3	442.598206	1324.77279	0.27789	0.00012299	2.7839	0.0012322	3.0618	0.0013552	442.5992268874901	49.012	1.5919	49.05	48.411	50.003	0.037731					104	38	4	0	0	0	0.86195	1	3790	3790		33.039	0.28887	1	284040			51691	8027	34585	34598	58343	58343					0.12339254090920804
RSLWRLEPLR	10	Unmodified	_RSLWRLEPLR_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.5995178222656	3	442.598206	1324.77279	-0.41498	-0.00018367	3.5377	0.0015658	3.1227	0.0013821	442.59963459131313	49.027	1.5485	48.933	48.252	49.8	-0.093178					102	37	3	0	0	0	0.86621	1	3766	3766		26.063	4.283	1	295460			51692	8027	34585	34598	58344	58344					0.12339254090920804
RSLWRRRGLL	10	Unmodified	_RSLWRRRGLL_					0	0	0			REV__nc|ENSG00000260528|P0CG43|FAM157C	REV__nc|ENSG00000260528|P0CG43|FAM157C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2457580566406	3	438.273945	1311.80001	1.596	0.00069948	-3.4364	-0.0015061	-1.8404	-0.0008066	438.2724382079491	105.92	0.50845	106.05	105.79	106.3	0.12741					40	17	3	0	0	0	0.37624	1	12938	12938		14.694	0	1	205360	+		51693	30249	34586	34599	58345	58345					0.15657782421976663
RSMKMAQEIAS	11	Unmodified	_RSMKMAQEIAS_					0	0	0			REV__nc|ENSG00000217128|Q8TF40-3|FNIP1	REV__nc|ENSG00000217128|Q8TF40-3|FNIP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.92242431640625	3	417.877652	1250.61113	-0.18595	-7.7704E-05	2.5181	0.0010523	2.3322	0.00097456	417.8782690734089	105.97	0.11749	105.95	105.86	105.97	-0.025146					4	2	2	0	0	0	0.17497	1	11488	11488		31.068	10.036	1	60021	+		51694	23697	34587	34600	58346	58346					-0.00415419048658805
RSMKPQGH	8	Unmodified	_RSMKPQGH_					0	0	0			REV__nc|ENSG00000068615|Q9H902-2|REEP1	REV__nc|ENSG00000068615|Q9H902-2|REEP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	469.7711181640625	2	470.742711	939.470869	-0.83968	-0.00039527	-2.967	-0.0013967	-3.8067	-0.001792	470.7406836722005	38.949	0.54792	39.291	38.896	39.444	0.34187					16	12	2	0	0	0	0.4196	1	3219	3219		24.203	0	1	52725	+		51695	16560	34588	34601	58347	58347					-0.0012879020007403597
RSMQPVHHL	9	Unmodified	_RSMQPVHHL_					0	0	0		nc|ENSG00000143995|O00470-2|MEIS1;ENSG00000143995|ENST00000272369|MEIS1;ENST00000491706.5_1_2:66662988-66667742:+|nuORF	nc|ENSG00000143995|O00470-2|MEIS1	nc|ENSG00000143995|O00470-2|MEIS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.7836303710938	2	552.790192	1103.56583	-1.1045	-0.00061054	0.27471	0.00015186	-0.82976	-0.00045868	552.7899581403892	73.535	1.3702	73.923	73.497	74.867	0.38779					94	35	4	0	0	0	0.38563	1	8338	8338		58.782	3.2778	1	12398000			51696	4682	34589	34602	58348	58348					0.018191432711091693
RSMSIAKA	8	Unmodified	_RSMSIAKA_					0	0	0			REV__ENSG00000152104|ENST00000366956|PTPN14	REV__ENSG00000152104|ENST00000366956|PTPN14	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.2400817871094	2	432.242012	862.469472	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.845	1	40.8	40.3	41.3	-0.045467								0	0	0	0.29619	1	2619	2619		25.574	0.12388	1		+		51697	20285	34590	34603	58349	58349					0.03273575711148169
RSMTVIRQ	8	Unmodified	_RSMTVIRQ_					0	0	0			REV__nc|ENSG00000111879|Q8NB25-4|FAM184A	REV__nc|ENSG00000111879|Q8NB25-4|FAM184A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.75347900390625	2	495.779293	989.544034	-0.99942	-0.00049549	-2.4042	-0.001192	-3.4037	-0.0016875	495.77824783159167	27.535	0.6142	27.384	27.306	27.92	-0.15075					18	13	2	0	0	0	0.4196	1	1592	1592		76.774	25.439	1	71519	+		51698	17903	34591	34604	58350	58350					0.048843385225495695
RSNAGPVPET	10	Unmodified	_RSNAGPVPET_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.2664184570312	2	514.261988	1026.50942	0.42811	0.00022016	2.3784	0.0012231	2.8065	0.0014433	514.2631198867779	51.16	0.5382	51.595	51.243	51.781	0.43505					17	12	2	0	0	0	0.37624	1	5042	5042		28.081	6.1216	1	309840			51699	4078	34592	34605	58351	58351					-0.0027720608459276264
RSNLDQRTPF	10	Unmodified	_RSNLDQRTPF_					0	0	0		ENSG00000168795|ENST00000307750|ZBTB5	ENSG00000168795|ENST00000307750|ZBTB5	ENSG00000168795|ENST00000307750|ZBTB5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	617.3240966796875	2	617.320368	1232.62618	-0.015519	-9.5801E-06	3.0844	0.0019041	3.0689	0.0018945	617.3222349816546	56.727	0.47269	56.698	56.49	56.963	-0.02866					26	18	2	0	0	0	0.51401	1	5214	5214		54.722	1.6334	1	270460			51700	6436	34593	34606	58352	58352					0.019175321351667662
RSNLICFGY	9	Unmodified	_RSNLICFGY_					0	0	0		ENSG00000147912|ENST00000432825|FBXO10;nc|ENSG00000147912|Q9UK96-2|FBXO10;ENST00000541804.1_1_9:37512546-37588833:-|nuORF;ENST00000544208.1_1_9:37522456-37525129:-|nuORF;ENST00000543968.5_1_9:37521875-37532049:-|nuORF	ENSG00000147912|ENST00000432825|FBXO10	ENSG00000147912|ENST00000432825|FBXO10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.8245849609375	2	536.765852	1071.51715	-0.41381	-0.00022212	-3.6027	-0.0019338	-4.0165	-0.0021559	536.7638709087718	74.491	0.86117	75.05	74.717	75.578	0.55891					38	20	3	0	0	0	0.20789	1	8398	8398		45.952	1.8352	1	240350			51701	4930	34594	34607	58353	58353					-0.015747700886549865
RSNRLKLIPL	10	Unmodified	_RSNRLKLIPL_					0	0	0		nc|ENSG00000169783|Q96FE5-2|LINGO1;ENSG00000169783|ENST00000355300|LINGO1	nc|ENSG00000169783|Q96FE5-2|LINGO1	nc|ENSG00000169783|Q96FE5-2|LINGO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9296569824219	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.8486	2	3980	3980;4004		17.167	0	1	2636600			51702	6524	34595	34608	58354;58355	58354					0.1756903972204782
RSNRLKLIPL	10	Unmodified	_RSNRLKLIPL_					0	0	0		nc|ENSG00000169783|Q96FE5-2|LINGO1;ENSG00000169783|ENST00000355300|LINGO1	nc|ENSG00000169783|Q96FE5-2|LINGO1	nc|ENSG00000169783|Q96FE5-2|LINGO1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.9295654296875	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.131	1	47.043	46.543	47.543	-0.087646								0	0	0	0.45132	1	3504	3504		18.531	0.69791	1				51703	6524	34595	34608	58356	58356					0.1756903972204782
RSNRLKLIPL	10	Unmodified	_RSNRLKLIPL_					0	0	0		nc|ENSG00000169783|Q96FE5-2|LINGO1;ENSG00000169783|ENST00000355300|LINGO1	nc|ENSG00000169783|Q96FE5-2|LINGO1	nc|ENSG00000169783|Q96FE5-2|LINGO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9293518066406	3	403.931185	1208.77173	-0.87886	-0.000355	-3.2249	-0.0013026	-4.1037	-0.0016576	403.9297749934075	46.008	1.1325	46.904	46.447	47.58	0.89542					87	27	4	0	0	0	0.84816	2	4311	4311;4334		22.562	2.5311	1	2092900			51704	6524	34595	34608	58357;58358	58357					0.1756903972204782
RSNTLNIAL	9	Unmodified	_RSNTLNIAL_					0	0	0		nc|ENSG00000183230|Q9UI47-2|CTNNA3;ENSG00000183230|ENST00000433211|CTNNA3	nc|ENSG00000183230|Q9UI47-2|CTNNA3	nc|ENSG00000183230|Q9UI47-2|CTNNA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2901306152344	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.77244	1	9156	9156		32.812	1.2826	1	9565500			51705	7510	34596	34609	58359	58359					0.06628261191792717
RSPAASRASPS	11	Unmodified	_RSPAASRASPS_					0	0	0			REV__ENST00000473989.7_2_7:138916399-138921835:+|nuORF	REV__ENST00000473989.7_2_7:138916399-138921835:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.7883911132812	2	543.786161	1085.55777	0.086849	4.7227E-05	3.4538	0.0018781	3.5406	0.0019253	543.7878508528075	33.084	0.99409	33.082	32.75	33.744	-0.0016327					48	23	3	0	0	0	0.54689	1	1915	1915		48.602	2.6293	1	324090	+		51706	27290	34597	34610	58360	58360					0.018412875553167396
RSPAFPNI	8	Unmodified	_RSPAFPNI_					0	0	0			REV__nc|ENSG00000100150|O75140-6|DEPDC5	REV__nc|ENSG00000100150|O75140-6|DEPDC5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2472839355469	2	451.248152	900.481751	-1.4716	-0.00066404	2.9168	0.0013162	1.4452	0.00065215	451.24928193885836	68.02	1.4601	68.02	67.491	68.952	0					124	59	3	0	0	0	0.89962	1	5992	5992		38.806	1.647	1	151770	+		51707	17143	34598	34611	58361	58361					0.027529354458465605
RSPAIKHILQ	10	Unmodified	_RSPAIKHILQ_					0	0	0		ENST00000392845.7_1_3:155551329-155560245:-|nuORF	ENST00000392845.7_1_3:155551329-155560245:-|nuORF	ENST00000392845.7_1_3:155551329-155560245:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.8048095703125	2	581.85639	1161.69823	-0.4754	-0.00027662	3.4855	0.0020281	3.0101	0.0017515	581.8589832734108	62.559	0.47515	63.114	62.907	63.382	0.5545					17	10	2	0	0	0	0.37624	1	6748	6748		37.812	0	1	118250			51708	11032	34599	34612	58362	58362					0.12384491279544818
RSPALAPAP	9	Unmodified	_RSPALAPAP_					0	0	0		ENST00000301998.4_1_2:62423428-62449359:+|nuORF	ENST00000301998.4_1_2:62423428-62449359:+|nuORF	ENST00000301998.4_1_2:62423428-62449359:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.25390625	2	440.255977	878.497401	0.13015	5.7301E-05	-1.6838	-0.00074131	-1.5537	-0.00068401	440.2551148846597	60.577	0.73638	60.608	60.275	61.012	0.0312					48	22	3	0	0	0	0.7932	1	5680	5680		17.365	0	1	201780			51709	9813	34600	34613	58363	58363					0.053292219628815474
RSPALGLIKQI	11	Unmodified	_RSPALGLIKQI_					0	0	0			REV__ENSG00000143183|ENST00000367881|TMCO1	REV__ENSG00000143183|ENST00000367881|TMCO1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.2819213867188	2	598.379697	1194.74484	-0.14608	-8.7413E-05	3.8727	0.0023174	3.7266	0.0022299	598.3818743538133	41.872	0.65922	41.841	41.542	42.202	-0.030991					29	15	2	0	0	0	0.17382	1	3123	3123		28.081	11.364	1	355310	+		51710	19780	34601	34614	58364	58364					0.15525931110823876
RSPALPYLPS	10	Unmodified	_RSPALPYLPS_					0	0	0		nc|ENSG00000187821|A6NFD8-4|HELT;ENSG00000187821|ENST00000515777|HELT	nc|ENSG00000187821|A6NFD8-4|HELT	nc|ENSG00000187821|A6NFD8-4|HELT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.808837890625	2	550.808574	1099.60259	0.24565	0.0001353	-3.6935	-0.0020344	-3.4479	-0.0018991	550.8063464981013	29.888	1.5118	29.799	29.104	30.616	-0.089546					94	34	5	0	0	0	0.51302	1	1876	1876		54.776	0	1	1346500			51711	7885	34602	34615	58365	58365					0.056777183686335775
RSPARGAYL	9	Unmodified	_RSPARGAYL_					0	0	0		ENSG00000105137|ENST00000342784|SYDE1;ENST00000600252.5_1_19:15219832-15221230:+|nuORF	ENSG00000105137|ENST00000342784|SYDE1;ENST00000600252.5_1_19:15219832-15221230:+|nuORF	ENST00000600252.5_1_19:15219832-15221230:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.77899169921875	2	495.777608	989.540663	-0.33921	-0.00016817	3.663	0.001816	3.3238	0.0016479	495.77908046755147	77.797	0.73346	78.202	77.895	78.628	0.40531					38	17	4	0	0	0	0.74721	1	8856	8856		37.159	2.9866	1	958180			51712	2189;14380	34603	34616	58366	58366					0.045474117401681724
RSPASLIPG	9	Unmodified	_RSPASLIPG_					0	0	0			REV__ENST00000249075.3_1_22:30637085-30637283:-|nuORF	REV__ENST00000249075.3_1_22:30637085-30637283:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2615661621094	2	449.261259	896.507966	-1.0968	-0.00049275	-0.18393	-8.2631E-05	-1.2807	-0.00057538	449.2607952075847	68.72	0.63625	68.786	68.468	69.105	0.065506					51	27	3	0	0	0	0.69624	1	6170	6170		40.778	0	1	231580	+		51713	24275	34604	34617	58367	58367					0.05557204617332445
RSPGDGHN	8	Unmodified	_RSPGDGHN_					0	0	0		nc|ENSG00000165801|Q8TER5-4|ARHGEF40;nc|ENSG00000165801|Q8TER5-3|ARHGEF40;ENSG00000165801|ENST00000298694|ARHGEF40	nc|ENSG00000165801|Q8TER5-4|ARHGEF40	nc|ENSG00000165801|Q8TER5-4|ARHGEF40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.1918029785156	2	420.191365	838.368178	1.7374	0.00073004	-2.4837	-0.0010436	-0.7463	-0.00031359	420.1905572526673	93.928	4.8779	94.369	91.96	96.838	0.44099					240	120	3	0	0	0	0.89043	1	11035	11035		35.618	2.1027	1	4179400			51714	6124	34605	34618	58368	58368					-0.05747159667180313
RSPGRALV	8	Unmodified	_RSPGRALV_					0	0	0			REV__ENST00000318560.5_1_9:133730370-133730430:+|nuORF	REV__ENST00000318560.5_1_9:133730370-133730430:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2615051269531	2	428.261594	854.508634	-1.021	-0.00043726	1.2368	0.00052966	0.21577	9.2404E-05	428.26203928148993	90.556	2.3584	91.026	90.524	92.882	0.47068					198	56	5	0	0	0	0.86677	1	10907	10907		27.882	3.6795	1	38446000	+		51715	24976	34606	34619	58369	58369					0.0755604405703707
RSPGRLTVL	9	Unmodified	_RSPGRLTVL_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	499.8086242675781	2	499.808908	997.603263	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.965	1	32.963	32.463	33.463	-0.0016365								0	0	0	0.32039	1	1909	1909		44.117	1.6423	1				51716	720	34607	34620	58370	58370					0.10436557808350244
RSPGTRLKPAK	11	Unmodified	_RSPGTRLKPAK_					0	0	0		ENSG00000099904|ENST00000334554|ZDHHC8;nc|ENSG00000099904|Q9ULC8-2|ZDHHC8;nc|ENSG00000099904|Q9ULC8-3|ZDHHC8	ENSG00000099904|ENST00000334554|ZDHHC8	ENSG00000099904|ENST00000334554|ZDHHC8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.9122314453125	3	404.250806	1209.73059	0.091311	3.6913E-05	4.2615	0.0017227	4.3528	0.0017596	404.25273897087	30.665	0.62025	30.693	30.406	31.026	0.028618					22	13	2	0	0	0	0.17272	1	2029	2029		10.998	0	1	86043			51717	1776	34608	34621	58371	58371					0.13411278682542616
RSPLKRSIPGQ	11	Unmodified	_RSPLKRSIPGQ_					0	0	0		ENST00000507992.5_1_4:15683481-15686479:+|nuORF	ENST00000507992.5_1_4:15683481-15686479:+|nuORF	ENST00000507992.5_1_4:15683481-15686479:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8700561523438	2	619.870028	1237.7255	-0.18236	-0.00011304	-0.59862	-0.00037106	-0.78097	-0.0004841	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.732	1	9688	9688		26.063	0	1	2627900			51718	12970	34609	34622	58372	58372					0.11614974819917734
RSPPAMPN	8	Unmodified	_RSPPAMPN_					0	0	0			REV__nc|ENSG856|P87889|ERVK-10_gag	REV__nc|ENSG856|P87889|ERVK-10_gag	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.9176330566406	2	435.218537	868.422522	-0.48614	-0.00021158	-3.6036	-0.0015683	-4.0897	-0.0017799	435.2166338196273	27.223	0.48975	27.048	26.703	27.193	-0.17559					14	10	2	0	0	0	0.4196	1	1513	1513		6.7355	0	1	28979	+		51719	30318	34610	34623	58373	58373					-0.016952838399902248
RSPPPSLAKQ	10	Unmodified	_RSPPPSLAKQ_					0	0	0		nc|ENSG00000167535|P54284-5|CACNB3;nc|ENSG00000167535|P54284-2|CACNB3;nc|ENSG00000167535|P54284-3|CACNB3;nc|ENSG00000167535|P54284-4|CACNB3;ENSG00000167535|ENST00000301050|CACNB3	nc|ENSG00000167535|P54284-5|CACNB3	nc|ENSG00000167535|P54284-5|CACNB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8143920898438	2	540.811648	1079.60874	0.8666	0.00046867	3.2816	0.0017747	4.1482	0.0022434	540.8132603712176	34.701	1.5165	35.082	34.194	35.71	0.3812					89	37	3	0	0	0	0.49027	2	2588	2578;2588		56.632	7.0962	1	1152000			51720	6299	34611	34624	58374;58375	58375					0.07212236600184951
RSPRGLLVQ	9	Unmodified	_RSPRGLLVQ_					0	0	0			REV__ENST00000465807.1_1_10:102826065-102827451:+|nuORF	REV__ENST00000465807.1_1_10:102826065-102827451:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.317626953125	2	513.314358	1024.61416	0.017852	9.1639E-06	4.224	0.0021683	4.2419	0.0021774	513.3163616040292	43.268	1.3862	43.218	42.749	44.135	-0.050312					74	33	3	0	0	0	0.67345	1	2986	2986		42.396	9.5837	1	383900	+		51721	27116	34612	34625	58376	58376					0.10283960182664487
RSPRKPTRKIS	11	Unmodified	_RSPRKPTRKIS_					0	0	0		ENSG00000105325|ENST00000441788|FZR1;nc|ENSG00000105325|Q9UM11|FZR1	ENSG00000105325|ENST00000441788|FZR1	ENSG00000105325|ENST00000441788|FZR1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.6052551269531	3	442.608993	1324.80515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.313	1	56.313	55.813	56.813	0								0	0	0	0.56276	1	4823	4823		18.332	2.411	1				51722	2202	34613	34626	58377	58377					0.1557404149393733
RSPRPLGG	8	Unmodified	_RSPRPLGG_					0	0	0		ENSG00000255690|ENST00000539664|TRIL	ENSG00000255690|ENST00000539664|TRIL	ENSG00000255690|ENST00000539664|TRIL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2276916503906	2	420.245944	838.477334	0.27342	0.0001149	-3.5327	-0.0014846	-3.2592	-0.0013697	420.2456965561311	80.751	1.3479	80.691	80.252	81.6	-0.059692					70	33	3	0	0	0	0.4196	1	8066	8066		18.324	1.8513	1	73298			51723	8889	34614	34627	58378	58378					0.05163471022945032
RSPRPQVGSP	10	Unmodified	_RSPRPQVGSP_					0	0	0		ENST00000513567.5_1_4:46995745-46995916:+|nuORF	ENST00000513567.5_1_4:46995745-46995916:+|nuORF	ENST00000513567.5_1_4:46995745-46995916:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.8006591796875	2	540.799072	1079.58359	-0.095369	-5.1576E-05	3.7057	0.002004	3.6103	0.0019525	540.800879373307	50.317	0.71403	50.315	49.991	50.705	-0.0020447					39	17	3	0	0	0	0.85981	1	4284	4284		35.152	3.1972	1	274590			51724	13053	34615	34628	58379	58379					0.04698181797630241
RSPSPWRLIDL	11	Unmodified	_RSPSPWRLIDL_					0	0	0		ENST00000404977.6_1_1:204797788-204937064:+|nuORF	ENST00000404977.6_1_1:204797788-204937064:+|nuORF	ENST00000404977.6_1_1:204797788-204937064:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	446.25701904296875	3	447.254216	1338.74082	-0.47651	-0.00021312	0.9886	0.00044216	0.51209	0.00022903	447.5885842752351	37.678	0.733	37.991	37.579	38.312	0.31312					41	18	4	0	0	0	0.17244	1	3020	3020		25.068	4.7528	1	278130			51725	11262	34616	34629	58380	58380					0.08499841617140191
RSQALGKG	8	Unmodified	_RSQALGKG_					0	0	0			REV__ENSG00000137656|ENST00000260210|BUD13	REV__ENSG00000137656|ENST00000260210|BUD13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7394104003906	2	408.737951	815.46135	-0.071529	-2.9237E-05	4.315	0.0017637	4.2434	0.0017344	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.82658	1	2019	2019		21.96	0.25755	1	1654100	+		51726	19398	34617	34630	58381	58381					0.04623764786049378
RSQGITHHTR	10	Unmodified	_RSQGITHHTR_					0	0	0		ENSG00000274211|ENST00000612932|SOCS7;nc|ENSG00000274211|O14512|SOCS7;nc|ENSG00000274211|O14512-2|SOCS7	ENSG00000274211|ENST00000612932|SOCS7	ENSG00000274211|ENST00000612932|SOCS7	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.6576538085938	2	596.818327	1191.6221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.064	1	75.064	74.564	75.564	0								0	0	0	0.45132	1	6788	6788		33.922	0	1				51727	8993	34618	34631	58382	58382					0.03395487432112532
RSQIQIVKPLN	11	Unmodified	_RSQIQIVKPLN_					0	0	0			REV__ENST00000569912.1_1_22:40439522-40440098:-|nuORF	REV__ENST00000569912.1_1_22:40439522-40440098:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59771728515625	3	432.597983	1294.77212	0.73472	0.00031784	-0.49869	-0.00021573	0.23603	0.00010211	432.59773549861245	107.06	1.3761	107.15	106.64	108.02	0.091263					138	33	6	0	0	0	0.76251	1	11579	11579		17.722	5.7892	1	14015000	+		51728	28917	34619	34632	58383	58383					0.13652414651232903
RSQKKSLKPE	10	Unmodified	_RSQKKSLKPE_					0	0	0			REV__chr16:75645839-75647578|15|13.33|0.4|5.05|-|1|None,KARS1|1	REV__chr16:75645839-75647578|15|13.33|0.4|5.05|-|1|None,KARS1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2063903808594	3	400.906816	1199.69862	1.7136	0.000687	-3.5119	-0.0014079	-1.7983	-0.00072094	401.2389438842042	26.862	0.27035	26.522	26.323	26.593	-0.34035					8	5	2	0	0	0	0.37624	1	1516	1516		37.6	16.763	1	20255	+		51729	15641	34620	34633	58384	58384					0.10675866208794105
RSQKPLLLQ	9	Unmodified	_RSQKPLLLQ_					0	0	0			REV__ENST00000589290.1_1_19:13875402-13879305:+|nuORF	REV__ENST00000589290.1_1_19:13875402-13879305:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.8614501953125	2	541.837665	1081.66078	0.003053	1.6542E-06	0.0091146	4.9386E-06	0.012168	6.5928E-06	541.8374150925847	36.603	0.64279	36.627	36.228	36.87	0.023624					27	18	2	0	0	0	0.20789	1	2026	2026		14.865	0	1	81181	+		51730	16299	34621	34634	58385	58385					0.12321400013956918
RSQLPVAM	8	Unmodified	_RSQLPVAM_					0	0	0			REV__ENST00000300648.6_1_12:120593516-120594359:-|nuORF	REV__ENST00000300648.6_1_12:120593516-120594359:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.24908447265625	2	451.249837	900.485122	-0.60944	-0.00027501	-1.6864	-0.00076097	-2.2958	-0.001036	451.24890898084885	67.67	1.2739	67.634	67.25	68.524	-0.035698					111	49	3	0	0	0	0.86288	1	6566	6566		26.796	0	1	185140	+		51731	24752	34622	34635	58386	58386					0.03089862228216589
RSQLPVAM	8	Unmodified	_RSQLPVAM_					0	0	0			REV__ENST00000300648.6_1_12:120593516-120594359:-|nuORF	REV__ENST00000300648.6_1_12:120593516-120594359:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2484436035156	2	451.249837	900.485122	-0.10221	-4.6121E-05	-2.4347	-0.0010987	-2.537	-0.0011448	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.84341	2	6475	6432;6475		29.15	4.9468	1	178200	+		51732	24752	34622	34635	58387;58388	58388					0.03089862228216589
RSQLSTGLKTK	11	Unmodified	_RSQLSTGLKTK_					0	0	0		ENST00000353234.4_1_9:101497137-101497227:-|nuORF	ENST00000353234.4_1_9:101497137-101497227:-|nuORF	ENST00000353234.4_1_9:101497137-101497227:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7852478027344	3	406.910338	1217.70918	0.94704	0.00038536	2.8056	0.0011416	3.7526	0.001527	407.24474782683416	33.64	0.57889	33.945	33.745	34.324	0.30494					18	13	2	0	0	0	0.17424	1	2462	2462		18.332	0	1	98325			51733	10330	34623	34636	58389	58389					0.1090384886317679
RSQLVPVRA	9	Unmodified	_RSQLVPVRA_					0	0	0		ENSG00000117407|ENST00000372359|ARTN;nc|ENSG00000117407|Q5T4W7-3|ARTN;nc|ENSG00000117407|Q5T4W7-2|ARTN	ENSG00000117407|ENST00000372359|ARTN	ENSG00000117407|ENST00000372359|ARTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3182373046875	2	513.314358	1024.61416	0.39078	0.00020059	4.0535	0.0020807	4.4443	0.0022813	513.3164630994114	53.539	1.8096	53.62	52.959	54.769	0.081528					78	48	3	0	0	0	0.7932	1	4422	4422		26.693	1.1189	1	262680			51734	2975	34624	34637	58390	58390					0.10283960182664487
RSQQEREQEL	10	Unmodified	_RSQQEREQEL_					0	0	0		nc|ENSG00000162711|Q96P20-3|NLRP3;ENST00000474792.1_1_1:247582090-247588902:+|nuORF;nc|ENSG00000162711|Q96P20-2|NLRP3;nc|ENSG00000162711|Q96P20-5|NLRP3;nc|ENSG00000162711|Q96P20-4|NLRP3;nc|ENSG00000162711|Q96P20-6|NLRP3;ENSG00000162711|ENST00000336119|NLRP3;nc|ENSG00000162711|Q96P20|NLRP3	nc|ENSG00000162711|Q96P20-3|NLRP3	nc|ENSG00000162711|Q96P20-3|NLRP3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2825012207031	3	434.88474	1301.63239	-0.55218	-0.00024013	1.0925	0.00047513	0.54036	0.00023499	435.22022640787173	66.771	1.3245	66.735	66.474	67.798	-0.035698					93	56	2	0	0	0	0.37624	1	6361	6361		13.508	7.1871	1	255250			51735	5723	34625	34638	58391	58391					-0.00635994423964803
RSQRPRAL	8	Unmodified	_RSQRPRAL_					0	0	0			REV__ENSG00000179270|ENST00000331664|PCARE	REV__ENSG00000179270|ENST00000331664|PCARE	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.29833984375	2	492.296499	982.578445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.248	1	60.365	59.865	60.865	0.11676								0	0	0	0.29245	1	5213	5213		30.504	1.3541	1		+		51736	22327	34626	34639	58392	58392					0.08645922725645505
RSQRRAPHL	9	Unmodified	_RSQRRAPHL_					0	0	0		ENSG00000182173|ENST00000333213|TSEN54	ENSG00000182173|ENST00000333213|TSEN54	ENSG00000182173|ENST00000333213|TSEN54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.824951171875	2	560.825955	1119.63736	1.1549	0.0006477	-1.0268	-0.00057588	0.12805	7.1812E-05	560.825160852037	50.533	0.81666	51.284	51.001	51.818	0.75174					50	19	4	0	0	0	0.76764	1	4979	4979		34.173	2.5383	1	2961300			51737	7431	34627	34640	58393	58393					0.08232399019971126
RSQRVPGAAAS	11	Unmodified	_RSQRVPGAAAS_					0	0	0		ENST00000411419.6_1_10:126799584-126849578:-|nuORF	ENST00000411419.6_1_10:126799584-126849578:-|nuORF	ENST00000411419.6_1_10:126799584-126849578:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3037109375	2	550.301978	1098.5894	-0.16311	-8.9759E-05	3.9211	0.0021578	3.758	0.002068	550.3039343164278	22	0.63786	21.39	21.072	21.71	-0.6107					31	15	3	0	0	0	0.45992	1	857	857		54.722	5.1863	1	239270			51738	11325	34628	34641	58394	58394					0.04405280309288173
RSQSAFSIT	9	Unmodified	_RSQSAFSIT_					0	0	0		nc|ENSG00000170011|Q8NFW9-5|MYRIP;nc|ENSG00000170011|Q8NFW9-4|MYRIP;nc|ENSG00000170011|Q8NFW9-3|MYRIP;nc|ENSG00000170011|Q8NFW9-6|MYRIP;nc|ENSG00000170011|Q8NFW9-2|MYRIP;ENSG00000170011|ENST00000302541|MYRIP	nc|ENSG00000170011|Q8NFW9-5|MYRIP	nc|ENSG00000170011|Q8NFW9-5|MYRIP	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.7659606933594	2	498.759081	995.503609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.681	1	28.793	28.293	29.293	0.11225								0	0	0	0.31001	1	1189	1189		42.864	7.7122	1				51739	6551	34629	34642	58395	58395					0.005676954037653559
RSRERKVPAS	10	Unmodified	_RSRERKVPAS_					0	0	0		nc|ENSG00000123815|Q96D53-2|COQ8B;ENSG00000123815|ENST00000324464|COQ8B;ENST00000593544.1_1_19:41211221-41220985:-|nuORF;ENST00000596455.5_1_19:41211221-41221674:-|nuORF;ENST00000601451.5_1_19:41211221-41220537:-|nuORF	nc|ENSG00000123815|Q96D53-2|COQ8B	nc|ENSG00000123815|Q96D53-2|COQ8B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	593.3445434570312	2	593.344178	1184.6738	3.3538	0.0019899	-3.1075	-0.0018438	0.2463	0.00014614	593.3422294286001	103.53	2.4934	103.48	103.12	105.61	-0.043755					162	59	4	0	0	0	0.86621	1	11344	11344		26.063	0.48933	1	2080000			51740	3290	34630	34643	58396	58396					0.08885231126032522
RSRERKVPAS	10	Unmodified	_RSRERKVPAS_					0	0	0		nc|ENSG00000123815|Q96D53-2|COQ8B;ENSG00000123815|ENST00000324464|COQ8B;ENST00000593544.1_1_19:41211221-41220985:-|nuORF;ENST00000596455.5_1_19:41211221-41221674:-|nuORF;ENST00000601451.5_1_19:41211221-41220537:-|nuORF	nc|ENSG00000123815|Q96D53-2|COQ8B	nc|ENSG00000123815|Q96D53-2|COQ8B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3446044921875	2	593.344178	1184.6738	-1.311	-0.00077786	1.8288	0.0010851	0.51784	0.00030725	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.86587	1	10935	10935		29.17	3.596	1	3957400			51741	3290	34630	34643	58397	58397					0.08885231126032522
RSRHEVSHY	9	Unmodified	_RSRHEVSHY_					0	0	0		nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.8171997070312	2	585.791778	1169.569	0.82492	0.00048323	-3.9769	-0.0023297	-3.152	-0.0018464	585.7891683887725	99.607	0.83055	99.94	99.649	100.48	0.33295					39	20	3	0	0	0	0.20789	1	12032	12032		27.882	0	1	355500			51742	2846	34631	34644	58398	58398					-0.008998903505244016
RSRKIRKQLRS	11	Unmodified	_RSRKIRKQLRS_					0	0	0		ENSG00000170468|ENST00000304061|RIOX1	ENSG00000170468|ENST00000304061|RIOX1	ENSG00000170468|ENST00000304061|RIOX1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6241760253906	3	476.639176	1426.8957	-1.691	-0.000806	-0.097113	-4.6288E-05	-1.7881	-0.00085229	476.638999162344	107.85	0.18326	107.89	107.75	107.93	0.036125					6	4	2	0	0	0	0.181	1	11530	11530		7.3413	0.32217	1	1101700			51743	6594	34632	34645	58399	58399					0.19932510542230375
RSRKQKPPRR	10	Unmodified	_RSRKQKPPRR_					0	0	0		ENST00000383686.2_1_3:110611078-110612293:-|nuORF;ENST00000485473.1_1_3:110607768-110611435:-|nuORF	ENST00000383686.2_1_3:110611078-110612293:-|nuORF	ENST00000383686.2_1_3:110611078-110612293:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2737731933594	3	436.940966	1307.80107	-1.785	-0.00077992	-1.0768	-0.00047052	-2.8618	-0.0012504	436.94038031452806	46.547	1.4604	46.547	46.099	47.56	0					130	44	4	0	0	0	0.85285	1	3608	3608		16.717	0.18753	1	1002300			51744	10982	34633	34646	58400	58400					0.1594799679087373
RSRKWRLLRR	10	Unmodified	_RSRKWRLLRR_					0	0	0		ENST00000309117.10_1_21:38639566-38639725:-|nuORF	ENST00000309117.10_1_21:38639566-38639725:-|nuORF	ENST00000309117.10_1_21:38639566-38639725:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.6241149902344	3	476.304127	1425.89055	-0.10164	-4.8412E-05	4.1949	0.0019981	4.0933	0.0019496	476.305671718163	107.88	0.10657	107.84	107.78	107.89	-0.042404					4	2	2	0	0	0	0.37624	1	11749	11749		20.837	3.6704	1	590430			51745	9897	34634	34647	58401	58401					0.1946425147023092
RSRLLLAELE	10	Unmodified	_RSRLLLAELE_					0	0	0			REV__nc|ENSG00000151136|A6QL63-2|ABTB3	REV__nc|ENSG00000151136|A6QL63-2|ABTB3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.8309326171875	2	600.358962	1198.70337	0.52739	0.00031663	-0.51544	-0.00030945	0.011956	7.1777E-06	600.3589095445375	59.421	0.20237	59.535	59.355	59.557	0.11396					5	4	2	0	0	0	0.37624	1	5095	5095		39.253	0	1	40163	+		51746	20237	34635	34648	58402	58402					0.11196750351518858
RSRLPLSA	8	Unmodified	_RSRLPLSA_					0	0	0			REV__ENST00000409109.5_1_11:119039896-119039995:+|nuORF	REV__ENST00000409109.5_1_11:119039896-119039995:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2736511230469	2	450.274701	898.534849	0.72242	0.00032529	-0.72489	-0.0003264	-0.0024765	-1.1151E-06	450.2742724102636	97.22	1.8469	97.383	96.748	98.595	0.16316					99	42	3	0	0	0	0.87064	1	10079	10079		29.15	6.1071	1	387010	+		51747	26333	34636	34649	58403	58403					0.08152313228515595
RSRLQEAG	8	Unmodified	_RSRLQEAG_					0	0	0			REV__ENST00000278198.2_1_11:40315224-40315422:-|nuORF	REV__ENST00000278198.2_1_11:40315224-40315422:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7516784667969	2	458.75159	915.488627	-0.018123	-8.3139E-06	1.3368	0.00061327	1.3187	0.00060496	458.7518060865104	23.767	1.7664	23.385	23.018	24.785	-0.38178					59	39	2	0	0	0	0.94135	1	1092	1092		54.776	6.8607	1	878750	+		51748	24590	34637	34650	58404	58404					0.027502483264242983
RSRLRPSPAR	10	Unmodified	_RSRLRPSPAR_					0	0	0			REV__nc|ENSG00000163673|Q9C098|DCLK3	REV__nc|ENSG00000163673|Q9C098|DCLK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.8564453125	2	598.360162	1194.70577	-0.10487	-6.275E-05	-1.4642	-0.0008761	-1.569	-0.00093885	598.3593234657415	94.339	4.754	94.774	93.51	98.264	0.43539					199	117	2	0	0	0	0.86698	1	11165	11165		28.081	2.5074	1	27641000	+		51749	20956	34638	34651	58405	58405					0.11620643599826508
RSRLRRDSRQR	11	Unmodified	_RSRLRRDSRQR_					0	0	0			REV__ENST00000260324.11_1_15:45927092-45951106:+|nuORF	REV__ENST00000260324.11_1_15:45927092-45951106:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	496.2936096191406	3	495.957567	1484.85087	-0.74563	-0.0003698	3.3361	0.0016546	2.5905	0.0012848	495.95916322713595	102.89	1.4225	102.89	101.69	103.11	0					83	35	3	0	0	0	0.80574	1	10540	10540		10.145	0.49839	1	402120	+		51750	24367	34639	34652	58406	58406					0.12784079728862707
RSRLTCPC	8	Unmodified	_RSRLTCPC_					0	0	0			REV__ENST00000507603.1_1_4:75230918-75231029:+|nuORF	REV__ENST00000507603.1_1_4:75230918-75231029:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.23309326171875	2	468.231122	934.44769	0.42754	0.00020019	-1.308	-0.00061245	-0.88046	-0.00041226	468.23021070553153	67.749	0.57862	68.134	67.866	68.445	0.38483					20	13	2	0	0	0	0.4196	1	7416	7416		23.042	0	1	148120	+		51751	27909	34640	34653	58407	58407					-0.022155523090759743
RSRLVRPI	8	Unmodified	_RSRLVRPI_					0	0	0		nc|ENSG00000178297|Q7Z410|TMPRSS9;ENSG00000178297|ENST00000696167|TMPRSS9	nc|ENSG00000178297|Q7Z410|TMPRSS9	nc|ENSG00000178297|Q7Z410|TMPRSS9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	499.65032958984375	2	498.824892	995.635232	0.76672	0.00038246	-0.74822	-0.00037323	0.018505	9.2307E-06	498.8243281188188	16.096	0.19975	16.072	16.025	16.225	-0.024035					12	8	2	0	0	0	0.4196	1	118	118		12.207	3.9756	1	81162			51752	7198	34641	34654	58408	58408					0.13723970282183018
RSRPIPLVRMS	11	Unmodified	_RSRPIPLVRMS_					0	0	0		ENST00000607664.1_1_11:18363085-18363274:+|nuORF	ENST00000607664.1_1_11:18363085-18363274:+|nuORF	ENST00000607664.1_1_11:18363085-18363274:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.25958251953125	3	437.927446	1310.76051	0.23602	0.00010336	1.9985	0.00087521	2.2345	0.00097857	438.2630794988371	45.346	1.3309	45.389	44.445	45.776	0.042599					44	32	2	0	0	0	0.73647	1	3264	3264		25.068	3.2874	1	183310			51753	14465	34642	34655	58409	58409					0.11755894356247154
RSRPPSAPA	9	Unmodified	_RSRPPSAPA_					0	0	0		ENST00000488600.1_1_1:212002640-212003596:-|nuORF	ENST00000488600.1_1_1:212002640-212003596:-|nuORF	ENST00000488600.1_1_1:212002640-212003596:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7609558105469	2	469.761958	937.509363	-1.0651	-0.00050035	-0.060913	-2.8615E-05	-1.126	-0.00052896	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.76255	1	1975	1975		35.618	0	1	219920			51754	12635	34643	34656	58410	58410					0.03810838706078812
RSRQARPL	8	Unmodified	_RSRQARPL_					0	0	0			REV__ENST00000541239.5_1_13:111293886-111295180:-|nuORF	REV__ENST00000541239.5_1_13:111293886-111295180:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2994079589844	2	492.296499	982.578445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.348	1	66.478	65.978	66.978	0.12996								0	0	0	0.30125	1	5882	5882		20.482	0	1		+		51755	28479	34644	34657	58411	58411					0.08645922725645505
RSRQDARRVA	10	Unmodified	_RSRQDARRVA_					0	0	0			REV__ENST00000566525.5_1_16:770887-771532:+|nuORF	REV__ENST00000566525.5_1_16:770887-771532:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5640563964844	3	405.565676	1213.6752	-0.19603	-7.9504E-05	-2.1531	-0.0008732	-2.3491	-0.00095271	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.85834	1	5986	5986		22.58	0.018069	1	328790	+		51756	28870	34645	34658	58412	58412					0.0769086521479494
RSRRAARIEQT	11	Unmodified	_RSRRAARIEQT_					0	0	0			REV__nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	REV__nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3088684082031	3	448.592002	1342.75418	-0.0028409	-1.2744E-06	-1.8444	-0.0008274	-1.8473	-0.00082867	448.59115318871915	78.138	0.37151	78.701	78.497	78.868	0.56332					9	6	2	0	0	0	0.17835	1	8936	8936		8.0344	0	1	63999	+		51757	19802	34646	34659	58413	58413					0.09651092449075804
RSRRERRGRTR	11	Unmodified	_RSRRERRGRTR_					0	0	0			REV__ENST00000536792.5_1_13:26828364-26828673:+|nuORF	REV__ENST00000536792.5_1_13:26828364-26828673:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.95892333984375	3	495.961312	1484.86211	-0.74562	-0.0003698	-4.2138	-0.0020899	-4.9594	-0.0024597	495.95916322713595	102.89	1.4225	102.89	101.69	103.11	0					83	35	3	0	0	0	0.79945	1	10515	10515		11.455	1.8085	1	402120	+		51758	28414	34647	34660	58414	58414					0.13906901822997497
RSRRERRGRTR	11	Unmodified	_RSRRERRGRTR_					0	0	0			REV__ENST00000536792.5_1_13:26828364-26828673:+|nuORF	REV__ENST00000536792.5_1_13:26828364-26828673:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.9588317871094	3	495.961312	1484.86211	-0.54478	-0.00027019	-2.086	-0.0010346	-2.6308	-0.0013048	495.9589575527573	103.58	2.2288	103.62	102.98	105.21	0.041481					156	53	5	0	0	0	0.77803	1	11283	11283		15.921	2.4127	1	475540	+		51759	28414	34647	34660	58415	58415					0.13906901822997497
RSRRGPPPRES	11	Unmodified	_RSRRGPPPRES_					0	0	0			REV__ENST00000592937.1_1_19:2477660-2478092:+|nuORF	REV__ENST00000592937.1_1_19:2477660-2478092:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.24114990234375	3	432.241081	1293.70141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.723	1	40.804	40.304	41.304	0.081345								0	0	0	0.56276	1	2608	2608		25.068	4.7528	1		+		51760	29221	34648	34661	58416	58416					0.06631134386270787
RSRRIDRHL	9	Unmodified	_RSRRIDRHL_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.85888671875	2	604.857786	1207.70102	0.29518	0.00017854	1.184	0.00071614	1.4792	0.00089468	604.8584188713688	80.866	0.85687	81.288	80.891	81.748	0.4215					70	20	4	0	0	0	0.66686	1	9279	9279		27.882	0	1	4835500			51761	3532	34649	34662	58417	58417					0.10547759457085704
RSRRIDRHL	9	Unmodified	_RSRRIDRHL_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8589477539062	2	604.857786	1207.70102	0.22273	0.00013472	1.0841	0.0006557	1.3068	0.00079042	604.8583327420461	82.105	1.1205	82.531	81.753	82.873	0.42645					96	27	4	0	0	0	0.63647	1	9387	9387		37.812	4.9991	1	3330300			51762	3532	34649	34662	58418	58418					0.10547759457085704
RSRRIDRHL	9	Unmodified	_RSRRIDRHL_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.1704406738281	3	403.574283	1207.70102	1.1653	0.0004703	0.0015145	6.1123E-07	1.1668	0.00047091	403.5742539849741	78.731	0.59415	79.142	78.802	79.396	0.41059					30	13	3	0	0	0	0.20789	1	8961	8961		22.58	1.7425	1	507710			51763	3532	34649	34662	58419	58419					0.10547759457085704
RSRRIDRHL	9	Unmodified	_RSRRIDRHL_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8577880859375	2	604.857786	1207.70102	0.044967	2.7199E-05	1.3253	0.00080163	1.3703	0.00082883	604.8584867584212	80.792	1.0733	81.319	80.907	81.98	0.52676					69	21	4	0	0	0	0.70638	2	9293	9293;9376		32.812	8.2932	1	4362400			51764	3532	34649	34662	58420;58421	58420					0.10547759457085704
RSRRIDRHLR	10	Unmodified	_RSRRIDRHLR_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.9422607421875	3	455.607987	1363.80213	-1.2087	-0.00055071	2.1667	0.00098714	0.95792	0.00043643	455.6088629206426	71.18	2.4746	71.313	70.49	72.965	0.13356					216	101	3	0	0	0	0.86207	3	6428	6402;6428;6491		30.569	10.254	1	705050			51765	3532	34650	34663	58422;58423;58424	58423					0.13478211159781495
RSRRIDRHLR	10	Unmodified	_RSRRIDRHLR_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.9422302246094	3	455.607987	1363.80213	0.48153	0.00021939	0.41642	0.00018972	0.89795	0.00040911	455.60814868271837	69.73	0.6296	69.859	69.77	70.399	0.1291					56	31	2	0	0	0	0.86549	1	6327	6327		29.551	16.593	1	892320			51766	3532	34650	34663	58425	58425					0.13478211159781495
RSRRIDRHLR	10	Unmodified	_RSRRIDRHLR_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.60833740234375	3	455.607987	1363.80213	0.49166	0.00022401	0.35691	0.00016261	0.84857	0.00038662	455.608083696801	71.141	2.3916	71.271	70.4	72.791	0.12965					199	101	2	0	0	0	0.8492	4	6504	6415;6463;6497;6504		28.577	6.7963	1	552710			51767	3532	34650	34663	58426;58427;58428;58429	58429					0.13478211159781495
RSRRIDRHLR	10	Unmodified	_RSRRIDRHLR_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6085510253906	3	455.607987	1363.80213	-1.1288	-0.00051429	1.9629	0.00089433	0.83412	0.00038003	455.60885285042644	70.049	0.77111	70.12	69.911	70.682	0.071037					62	37	2	0	0	0	0.85979	2	6376	6345;6376		35.178	10.902	1	789440			51768	3532	34650	34663	58430;58431	58431					0.13478211159781495
RSRRIDRHLR	10	Unmodified	_RSRRIDRHLR_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.942626953125	3	455.607987	1363.80213	-1.1702	-0.00053316	2.0234	0.00092186	0.85314	0.0003887	455.6088473881977	71.256	2.1835	71.333	70.628	72.811	0.076225					206	91	3	0	0	0	0.86338	2	6603	6423;6603		31.634	3.0575	1	589510			51769	3532	34650	34663	58432;58433	58433					0.13478211159781495
RSRRIDRHLR	10	Unmodified	_RSRRIDRHLR_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.60845947265625	3	455.607987	1363.80213	-0.55129	-0.00025117	1.5527	0.00070741	1.0014	0.00045624	455.60861068027475	66.011	3.4136	66.397	63.789	67.202	0.38581					215	86	5	0	0	0	0.83456	9	7183	6906;6945;7106;7135;7140;7183;7227;7250;7280		37.508	6.44	1	1732400			51770	3532	34650	34663	58434;58435;58436;58437;58438;58439;58440;58441;58442	58439					0.13478211159781495
RSRRIDRHLR	10	Unmodified	_RSRRIDRHLR_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6087951660156	3	455.607987	1363.80213	-0.20528	-9.3526E-05	1.115	0.00050802	0.90976	0.0004145	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.5442	6	7311	7311;7407;7437;7510;7603;7628		53.089	5.8613	1	1835000			51771	3532	34650	34663	58443;58444;58445;58446;58447;58448	58443					0.13478211159781495
RSRRIDRHLR	10	Unmodified	_RSRRIDRHLR_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6082458496094	3	455.607987	1363.80213	-0.88204	-0.00040187	1.806	0.00082282	0.92394	0.00042096	455.6087169982617	69.938	2.9068	70.322	69.842	72.749	0.38416					146	73	3	0	0	0	0.86549	1	7717	7717		29.551	0.97402	1	869170			51772	3532	34650	34663	58449	58449					0.13478211159781495
RSRRIDRHLR	10	Unmodified	_RSRRIDRHLR_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6088562011719	3	455.607987	1363.80213	-0.02024	-9.2214E-06	0.95531	0.00043525	0.93507	0.00042602	455.608304720296	65.806	3.5163	66.359	63.877	67.393	0.5526					173	94	4	0	0	0	0.71918	6	7241	7024;7093;7197;7241;7275;7285		43.651	13.756	1	1863500			51773	3532	34650	34663	58450;58451;58452;58453;58454;58455	58453					0.13478211159781495
RSRRIDRHLR	10	Unmodified	_RSRRIDRHLR_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.608642578125	3	455.607987	1363.80213	-0.22489	-0.00010246	1.2176	0.00055473	0.99267	0.00045227	455.6084673579414	68.492	2.9936	69.039	67.107	70.101	0.54693					235	78	4	0	0	0	0.62712	8	7515	7295;7303;7331;7396;7515;7538;7647;7694		48.602	17.312	1	1863900			51774	3532	34650	34663	58456;58457;58458;58459;58460;58461;58462;58463	58460					0.13478211159781495
RSRRIDRHLR	10	Unmodified	_RSRRIDRHLR_					0	0	0		ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	ENSG00000128266|ENST00000615612|GNAZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6091613769531	3	455.607987	1363.80213	-0.22343	-0.00010179	1.1377	0.00051835	0.91428	0.00041655	455.6084251791674	69.831	3.554	70.377	70.039	73.593	0.54693					191	88	3	0	0	0	0.86647	1	7877	7877		28.577	0.93281	1	1270100			51775	3532	34650	34663	58464	58464					0.13478211159781495
RSRRITIH	8	Unmodified	_RSRRITIH_					0	0	0			REV__nc|ENSG00000151148|Q7Z3V4-2|UBE3B	REV__nc|ENSG00000151148|Q7Z3V4-2|UBE3B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8206787109375	2	519.817599	1037.62064	0.066288	3.4458E-05	1.2788	0.00066475	1.3451	0.00069921	519.8181781419161	84.428	1.8402	84.864	83.581	85.421	0.43538					115	44	4	0	0	0	0.79403	1	9824	9824		63.306	2.3343	1	6841200	+		51776	20238	34651	34664	58465	58465					0.10333898134035735
RSRRRRRWALW	11	Unmodified	_RSRRRRRWALW_					0	0	0			REV__ENST00000315691.7_1_3:143690776-143690935:+|nuORF	REV__ENST00000315691.7_1_3:143690776-143690935:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.6531982421875	3	533.650297	1597.92906	0.74299	0.00039649	4.1565	0.0022181	4.8995	0.0026146	533.6525196500749	17.085	0.39437	16.602	16.457	16.851	-0.48256					13	8	2	0	0	0	0.81219	1	218	218		8.7993	0	1	288770	+		51777	24948	34652	34665	58466	58466					0.15401557104792118
RSRRRRRWALW	11	Unmodified	_RSRRRRRWALW_					0	0	0			REV__ENST00000315691.7_1_3:143690776-143690935:+|nuORF	REV__ENST00000315691.7_1_3:143690776-143690935:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	533.650297	1597.92906	0.74299	0.00039649	4.1565	0.0022181	4.8995	0.0026146	533.6525196500749	17.085	0.39437	16.602	16.457	16.851	-0.48256	0.029504	-0.00057954	NaN	8.7993	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	288770	+		51778	24948	34652	34665							0.15401557104792118
RSRRTRPRKV	10	Unmodified	_RSRRTRPRKV_					0	0	0			REV__ENST00000461804.5_1_3:156877890-156877995:-|nuORF	REV__ENST00000461804.5_1_3:156877890-156877995:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2779235839844	3	437.944599	1310.81197	0.017183	7.5251E-06	-0.29308	-0.00012835	-0.2759	-0.00012083	437.94433058417764	16.234	0.21177	16.294	16.168	16.38	0.059269					14	9	2	0	0	0	0.86802	1	124	124		27.047	1.9213	1	60231	+		51779	27037	34653	34666	58467	58467					0.16899399165140494
RSRRWKVKH	9	Unmodified	_RSRRWKVKH_					0	0	0		ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.2976989746094	3	418.254773	1251.74249	1.8453	0.00077179	-1.4994	-0.00062713	0.34588	0.00014467	418.25406662068684	68.36	0.12946	68.393	68.335	68.465	0.033005					6	4	2	0	0	0	0.20789	1	6527	6527		24.519	0.28737	1	24930			51780	6107	34654	34667	58468	58468					0.1266894021639473
RSRRYYREQRF	11	Unmodified	_RSRRYYREQRF_					0	0	0		nc|ENSG00000181355|Q8IZS5|OFCC1;nc|ENSG00000181355|Q8IZS5-2|OFCC1	nc|ENSG00000181355|Q8IZS5|OFCC1	nc|ENSG00000181355|Q8IZS5|OFCC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.2298889160156	4	404.968374	1615.84439	1.5796	0.00063967	-3.2889	-0.0013319	-1.7094	-0.00069224	405.2168507111038	24.626	0.22313	24.298	24.116	24.339	-0.32825					6	4	2	0	0	0	0.18293	1	1184	1184		4.8861	0	1	15515			51781	15134	34655	34668	58469	58469					0.06110141777480749
RSRSEERPE	9	Unmodified	_RSRSEERPE_					0	0	0		ENSG00000215045|ENST00000457091|GRID2IP	ENSG00000215045|ENST00000457091|GRID2IP	ENSG00000215045|ENST00000457091|GRID2IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.2853393554688	2	573.286525	1144.5585	0.11082	6.3529E-05	-0.039099	-2.2415E-05	0.071716	4.1114E-05	573.2864109055901	20.889	0.68782	20.261	19.943	20.631	-0.62835					29	17	2	0	0	0	0.33718	1	700	700		62.107	5.3864	1	355890			51782	8646	34656	34669	58470	58470					-0.007999177956207859
RSRSKSPFR	9	Unmodified	_RSRSKSPFR_					0	0	0		ENST00000492779.5_1_20:34292405-34320086:-|nuORF;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;nc|ENSG00000131051|Q14498-3|RBM39;ENSG00000131051|ENST00000253363|RBM39;nc|ENSG00000131051|Q14498-2|RBM39	ENST00000492779.5_1_20:34292405-34320086:-|nuORF	ENST00000492779.5_1_20:34292405-34320086:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.81884765625	2	560.820338	1119.62612	0.38015	0.0002132	1.9491	0.0010931	2.3293	0.0013063	560.8213387874321	30.208	0.65522	30.118	29.875	30.53	-0.089544					30	14	3	0	0	0	0.77696	1	1997	1997		31.53	4.8369	1	571870			51783	3712	34657	34670	58471	58471					0.07109576925859074
RSRSLKRRER	10	Unmodified	_RSRSLKRRER_					0	0	0			REV__nc|ENSG00000007392|Q9NQ29-2|LUC7L	REV__nc|ENSG00000007392|Q9NQ29-2|LUC7L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.6076354980469	3	448.607875	1342.8018	-0.14494	-6.5021E-05	3.2264	0.0014474	3.0815	0.0013824	448.9437169224278	77.071	0.84238	77.124	76.655	77.498	0.052704					75	41	2	0	0	0	0.8492	1	7449	7449		18.531	1.3643	1	780830	+		51784	16123	34658	34671	58472	58472					0.14410791439900095
RSRSLKRRER	10	Unmodified	_RSRSLKRRER_					0	0	0			REV__nc|ENSG00000007392|Q9NQ29-2|LUC7L	REV__nc|ENSG00000007392|Q9NQ29-2|LUC7L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.61077880859375	3	448.607875	1342.8018	0.5352	0.00024009	2.8409	0.0012744	3.3761	0.0015145	448.6089733377508	76.693	0.99095	76.828	76.468	77.459	0.13478					122	48	3	0	0	0	0.86207	1	7211	7211		24.232	4.6049	1	670390	+		51785	16123	34658	34671	58473	58473					0.14410791439900095
RSRSRRKKK	9	Unmodified	_RSRSRRKKK_					0	0	0			REV__ENST00000537582.1_1_12:132281612-132284030:+|nuORF	REV__ENST00000537582.1_1_12:132281612-132284030:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.5486755371094	3	401.261928	1200.76395	0.33964	0.00013629	2.9292	0.0011754	3.2688	0.0013116	401.262127871882	49.522	1.4103	50.367	49.231	50.641	0.84501					42	34	2	0	0	0	0.20789	1	4759	4759		11.097	2.8617	1	502820	+		51786	16457	34659	34672	58474	58474					0.17160325245117747
RSRSRRKKK	9	Unmodified	_RSRSRRKKK_					0	0	0			REV__ENST00000537582.1_1_12:132281612-132284030:+|nuORF	REV__ENST00000537582.1_1_12:132281612-132284030:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	401.261928	1200.76395	1.333	0.00053488	5.1355	0.0020607	6.4685	0.0025956	401.26386403585536	49.77	0.53025	50.218	49.859	50.389	0.4476	-0.074654	0.0002054	NaN	7.0187	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	398240	+		51787	16457	34659	34672							0.17160325245117747
RSRTAIPLRNK	11	Unmodified	_RSRTAIPLRNK_					0	0	0			REV__nc|ENSG00000165219|Q14C86-4|GAPVD1	REV__nc|ENSG00000165219|Q14C86-4|GAPVD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2676696777344	3	437.93711	1310.7895	-0.60679	-0.00026573	-2.2896	-0.0010027	-2.8964	-0.0012685	437.9367394524739	54.576	0.14967	54.55	54.463	54.613	-0.025955					8	4	2	0	0	0	0.17281	1	4933	4933		14.243	0	1	63034	+		51788	21164	34660	34673	58475	58475					0.14653754976870914
RSRTKQLFEV	10	Unmodified	_RSRTKQLFEV_					0	0	0		nc|ENSG00000065923|Q96T83|SLC9A7;ENSG00000065923|ENST00000616978|SLC9A7	nc|ENSG00000065923|Q96T83|SLC9A7	nc|ENSG00000065923|Q96T83|SLC9A7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.2437438964844	3	421.910449	1262.70952	0.12802	5.4014E-05	-1.3728	-0.00057922	-1.2448	-0.00052521	422.2433116485115	21.099	0.46599	20.471	20.296	20.762	-0.62835					18	12	2	0	0	0	0.37624	1	752	752		9.2118	0	1	60811			51789	1145	34661	34674	58476	58476					0.08867268583026089
RSRTTPLGG	9	Unmodified	_RSRTTPLGG_					0	0	0		ENSG00000112787|ENST00000680143|FBRSL1;nc|ENSG00000112787|Q9HCM7|FBRSL1	ENSG00000112787|ENST00000680143|FBRSL1	ENSG00000112787|ENST00000680143|FBRSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.767333984375	2	472.76724	943.519927	-0.41041	-0.00019403	0.54101	0.00025577	0.1306	6.1745E-05	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.77244	1	8383	8383		32.812	4.9302	1	590200			51790	2681	34662	34675	58477	58477					0.04590821360534392
RSRVLEAL	8	Unmodified	_RSRVLEAL_					0	0	0		ENSG00000163781|ENST00000260810|TOPBP1;ENST00000513818.1_1_3:133337003-133343000:-|nuORF	ENSG00000163781|ENST00000260810|TOPBP1	ENSG00000163781|ENST00000260810|TOPBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28778076171875	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.87479	1	12194	12194		30.504	0	1	3080300			51791	5861	34663	34676	58478	58478					0.08748582400005489
RSRVLPHPNR	10	Unmodified	_RSRVLPHPNR_					0	0	0		ENST00000540447.5_1_12:10856597-10862620:-|nuORF;nc|ENSG00000060138|P16989-3|YBX3;ENSG00000060138|ENST00000228251|YBX3	ENST00000540447.5_1_12:10856597-10862620:-|nuORF	ENST00000540447.5_1_12:10856597-10862620:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.5763854980469	3	411.242533	1230.70577	2.5653	0.001055	0.28149	0.00011576	2.8468	0.0011707	411.2424876891329	102.75	0.89561	102.98	102.74	103.63	0.22556					34	27	2	0	0	0	0.86207	1	12478	12478		24.232	2.5461	1	2184900			51792	1060	34664	34677	58479	58479					0.09964643599846568
RSRVLWGA	8	Unmodified	_RSRVLWGA_					0	0	0		nc|ENSG00000112031|Q9UGC7-4|MTRF1L;nc|ENSG00000112031|Q9UGC7-2|MTRF1L;ENSG00000112031|ENST00000367233|MTRF1L	nc|ENSG00000112031|Q9UGC7-4|MTRF1L	nc|ENSG00000112031|Q9UGC7-4|MTRF1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.7742919921875	2	472.774868	943.535184	0.76274	0.00036061	-1.0371	-0.00049034	-0.2744	-0.00012973	472.7737350160956	22.936	0.70856	22.517	22.016	22.725	-0.41879					42	16	4	0	0	0	0.89457	1	985	985		37.028	1.8765	1	330150			51793	2628	34665	34678	58480	58480					0.061157329483762624
RSRVVLGETPP	11	Unmodified	_RSRVVLGETPP_					0	0	0		nc|ENSG00000169682|Q9H2V7-4|SPNS1;ENSG00000169682|ENST00000311008|SPNS1;ENST00000569969.5_2_16:28993234-28993426:+|nuORF	nc|ENSG00000169682|Q9H2V7-4|SPNS1	nc|ENSG00000169682|Q9H2V7-4|SPNS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.2347412109375	3	404.234933	1209.68297	1.8134	0.00073306	-0.057621	-2.3293E-05	1.7558	0.00070977	404.23433017015464	22.713	0.83821	22.295	21.97	22.808	-0.41879					50	19	5	0	0	0	0.6396	1	935	935		39.873	0.91356	1	221200			51794	6516	34666	34679	58481	58481					0.08651579691695588
RSSAATDQY	9	Unmodified	_RSSAATDQY_					0	0	0			REV__ENST00000331302.11_1_17:183569-183695:-|nuORF	REV__ENST00000331302.11_1_17:183569-183695:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	499.72882080078125	2	499.73052	997.446488	-0.45613	-0.00022794	-3.2775	-0.0016379	-3.7337	-0.0018658	499.7286925165346	73.379	0.46216	73.337	72.952	73.414	-0.042015					34	20	2	0	0	0	0.64555	1	7161	7161		44.377	3.8046	1	268650	+		51795	25122	34667	34680	58482	58482					-0.05233771872633497
RSSDRAQK	8	Unmodified	_RSSDRAQK_					0	0	0			REV__ENSG00000143631|ENST00000368799|FLG	REV__ENSG00000143631|ENST00000368799|FLG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2540588378906	2	474.254497	946.494441	-0.47841	-0.00022689	0.71564	0.0003394	0.23723	0.00011251	474.2547109107997	22.499	1.1216	21.888	21.633	22.755	-0.6107					48	27	2	0	0	0	0.8347	1	924	924		23.042	1.0826	1	176200	+	+	51796	15987	34668	34681	58483	58483					0.01905346838088917
RSSKGAGGLGV	11	Unmodified	_RSSKGAGGLGV_					0	0	0			REV__ENST00000215739.12_1_22:21336322-21336418:+|nuORF	REV__ENST00000215739.12_1_22:21336322-21336418:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7802734375	2	494.780348	987.546142	-1.4939	-0.00073914	1.358	0.0006719	-0.13591	-6.7245E-05	494.78084579093485	83.794	2.8854	83.932	82.379	85.265	0.13811					127	66	3	0	0	0	0.72106	1	8081	8081		28.081	1.2854	1	242900	+		51797	24115	34669	34682	58484	58484					0.05187090532012917
RSSLAPKGK	9	Unmodified	_RSSLAPKGK_					0	0	0			REV__nc|ENSG00000254221|Q9Y5G3-2|PCDHGB1	REV__nc|ENSG00000254221|Q9Y5G3-2|PCDHGB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28741455078125	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.78983	1	12576	12576		27.882	4.8398	1	3080300	+		51798	23888	34670	34683	58485	58485					0.08748582400005489
RSSLGGSHP	9	Unmodified	_RSSLGGSHP_					0	0	0		nc|nan|Q8N9P6|C9orf163	nc|nan|Q8N9P6|C9orf163	nc|nan|Q8N9P6|C9orf163	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.2325134277344	2	449.230491	896.446428	-0.14348	-6.4457E-05	0.39856	0.00017905	0.25508	0.00011459	449.2306007992336	83.429	3.7259	83.496	82.088	85.814	0.066719					221	85	3	0	0	0	0.78983	1	8252	8252		27.882	3.6795	1	236580			51799	15372	34671	34684	58486	58486					-0.005937270819458718
RSSPHIVSVA	10	Unmodified	_RSSPHIVSVA_					0	0	0			REV__ENSG00000156232|ENST00000286760|WHAMM	REV__ENSG00000156232|ENST00000286760|WHAMM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8062744140625	2	526.795998	1051.57744	1.1436	0.00060245	-1.326	-0.00069855	-0.18244	-9.6108E-05	526.7953635294319	18.498	0.32779	18.021	17.89	18.218	-0.47694					8	6	2	0	0	0	0.37624	1	379	379		31.53	0	1	34712	+		51800	20476	34672	34685	58487	58487					0.05371663566120333
RSSPPSPRH	9	Unmodified	_RSSPPSPRH_					0	0	0			REV__ENST00000249014.4_2_22:37962663-37964285:+|nuORF	REV__ENST00000249014.4_2_22:37962663-37964285:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.22271728515625	2	510.770314	1019.52608	0.82762	0.00042273	3.0155	0.0015402	3.8431	0.001963	510.77235579694457	88.485	0.12294	88.934	88.873	88.996	0.44893					4	2	2	0	0	0	0.20789	1	10419	10419		32.812	13.452	1	48504	+		51801	24272	34673	34686	58488	58488					0.01709339592048309
RSSPTRSAFSQ	11	Unmodified	_RSSPTRSAFSQ_					0	0	0			REV__ENST00000564991.1_16:18544442-18549860:-|nuORF	REV__ENST00000564991.1_16:18544442-18549860:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.5641174316406	3	408.542426	1222.60545	0.36845	0.00015053	1.2231	0.00049969	1.5916	0.00065022	408.54288212044105	57.526	2.0618	58.081	57.438	59.5	0.55513					84	50	2	0	0	0	0.17442	1	6175	6175		12.763	0	1	1342000	+		51802	28846	34674	34687	58489	58489					0.0030494175550757063
RSSSEGLGEQP	11	Unmodified	_RSSSEGLGEQP_					0	0	0			REV__ENST00000466533.5_3_X:37208678-37285144:+|nuORF	REV__ENST00000466533.5_3_X:37208678-37285144:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.7714233398438	2	573.772916	1145.53128	-0.87205	-0.00050036	-1.5906	-0.00091265	-2.4627	-0.001413	573.7718634593974	38.027	0.84522	37.999	37.696	38.541	-0.027843					39	19	3	0	0	0	0.732	1	2578	2578		26.063	0.9374	1	317510	+		51803	27132	34675	34688	58490	58490					-0.035664461266378567
RSSSKERDH	9	Unmodified	_RSSSKERDH_					0	0	0		ENSG00000226763|ENST00000417606|SRRM5	ENSG00000226763|ENST00000417606|SRRM5	ENSG00000226763|ENST00000417606|SRRM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.2756958007812	2	551.273418	1100.53228	0.32503	0.00017918	3.2742	0.001805	3.5993	0.0019842	551.2751109394707	27.083	1.2037	27.045	26.676	27.88	-0.038523					78	29	4	0	0	0	0.28163	1	1253	1253		66.429	0	1	656180			51804	8715	34676	34689	58491	58491					-0.01396186967099311
RSSSSYIITRL	11	Unmodified	_RSSSSYIITRL_					0	0	0			REV__CON__Q1RMN8	REV__CON__Q1RMN8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.858154296875	2	641.859326	1281.7041	-0.052066	-3.3419E-05	-0.555	-0.00035623	-0.60707	-0.00038965	641.8586484820704	118.5	0.48003	118.42	118.21	118.69	-0.07531					44	17	3	0	0	0	0.7144	1	12705	12705		29.17	0	1	700550	+	+	51805	16000	34677	34690	58492	58492					0.07451545000549231
RSSSVERSS	9	Unmodified	_RSSSVERSS_					0	0	0			REV__nc|ENSG00000258289|Q8WUH1-1|CHURC1	REV__nc|ENSG00000258289|Q8WUH1-1|CHURC1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.7483215332031	2	497.749244	993.483936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.23	1	29.187	28.687	29.687	-0.043095								0	0	0	0.31738	1	1519	1519		24.519	1.4767	1		+		51806	30245	34678	34691	58493	58493					-0.013066806069787162
RSSTAKVTIN	10	Unmodified	_RSSTAKVTIN_					0	0	0		nc|ENSG00000184226|Q9HC56-2|PCDH9;ENSG00000184226|ENST00000377865|PCDH9	nc|ENSG00000184226|Q9HC56-2|PCDH9	nc|ENSG00000184226|Q9HC56-2|PCDH9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.8067016601562	2	538.806562	1075.59857	1.2439	0.00067023	-1.0121	-0.00054534	0.2318	0.00012489	538.8059653540298	90.569	3.7366	90.615	89.222	92.959	0.046448					245	88	4	0	0	0	0.8608	2	9369	9369;9453		34.173	0.91578	1	805100			51807	7594	34679	34692	58494;58495	58494					0.06379628874969967
RSSTATSRRLT	11	Unmodified	_RSSTATSRRLT_					0	0	0		ENST00000575671.5_1_16:3722820-3724470:-|nuORF	ENST00000575671.5_1_16:3722820-3724470:-|nuORF	ENST00000575671.5_1_16:3722820-3724470:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.345703125	2	618.344375	1234.6742	-0.32375	-0.00020019	2.8463	0.00176	2.5226	0.0015598	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.67778	1	10349	10349		35.152	2.3396	1	926440			51808	14052	34680	34693	58496	58496					0.06624606055243021
RSSVFQTILNL	11	Unmodified	_RSSVFQTILNL_					0	0	0			REV__ENSG00000244476|ENST00000472091|ERVFRD-1	REV__ENSG00000244476|ENST00000472091|ERVFRD-1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2527770996094	3	426.578588	1276.71394	0.72858	0.0003108	2.6717	0.0011397	3.4003	0.0014505	426.9141545692903	17.659	0.24058	17.176	16.991	17.232	-0.48256					9	5	3	0	0	0	0.16261	1	286	286		14.243	3.2451	1	68647	+		51809	23850	34681	34694	58497	58497					0.08664733005980452
RSSVFQTILNL	11	Unmodified	_RSSVFQTILNL_					0	0	0			REV__ENSG00000244476|ENST00000472091|ERVFRD-1	REV__ENSG00000244476|ENST00000472091|ERVFRD-1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	426.578588	1276.71394	-1.8222	-0.00077732	1.6359	0.00069785	-0.1863	-7.9472E-05	426.57892147465043	17.065	0.21279	17.11	17.048	17.261	0.0457	-0.024132	0.00047191	NaN	14.243	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51490	+		51810	23850	34681	34694							0.08664733005980452
RSSVFQTILNL	11	Unmodified	_RSSVFQTILNL_					0	0	0			REV__ENSG00000244476|ENST00000472091|ERVFRD-1	REV__ENSG00000244476|ENST00000472091|ERVFRD-1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	426.578588	1276.71394	0.012697	5.4161E-06	0.18034	7.693E-05	0.19304	8.2346E-05	426.91313985185764	17.055	0.21922	17.117	16.993	17.213	0.062603	-0.017268	-0.0013909	NaN	14.243	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29201	+		51811	23850	34681	34694							0.08664733005980452
RSSVLNDYK	9	Unmodified	_RSSVLNDYK_					0	0	0			REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	REV__ENST00000357388.7_1_3:160151664-160151871:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.286376953125	2	541.285463	1080.55637	0.90507	0.0004899	-0.97301	-0.00052668	-0.06794	-3.6775E-05	541.2848148372841	20.292	0.81443	20.271	20.029	20.843	-0.020922					88	41	3	0	0	0	0.41566	1	472	472		56.721	8.7615	1	521470	+		51812	25411	34682	34695	58498	58498					0.01931653466544958
RSSVPTKR	8	Unmodified	_RSSVPTKR_					0	0	0			REV__chr3:100160501-100166335|20|18.15|0.39|5.55|+|0|CMSS1,CMSS1|1	REV__chr3:100160501-100166335|20|18.15|0.39|5.55|+|0|CMSS1,CMSS1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7775573730469	2	465.777608	929.540663	-1.0371	-0.00048307	0.85648	0.00039893	-0.18065	-8.4142E-05	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.81184	1	7771	7771		19.997	0	1	1384500	+		51813	15792	34683	34696	58499	58499					0.07307411740191583
RSTALARV	8	Unmodified	_RSTALARV_					0	0	0		ENST00000372801.5_1_20:43653661-43653724:+|nuORF	ENST00000372801.5_1_20:43653661-43653724:+|nuORF	ENST00000372801.5_1_20:43653661-43653724:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26568603515625	2	437.266876	872.519199	-0.36504	-0.00015962	-2.3712	-0.0010368	-2.7362	-0.0011965	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.84579	1	908	908		24.519	0.31644	1	1300600			51814	10718	34684	34697	58500	58500					0.07784026711476599
RSTARPVSA	9	Unmodified	_RSTARPVSA_					0	0	0			REV__ENST00000326434.9_1_3:9985112-9985184:+|nuORF	REV__ENST00000326434.9_1_3:9985112-9985184:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.76708984375	2	472.76724	943.519927	-0.41041	-0.00019403	0.54101	0.00025577	0.1306	6.1745E-05	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.78983	1	8347	8347		27.882	0	1	590200	+		51815	25078	34685	34698	58501	58501					0.04590821360523023
RSTAYGWVI	9	Unmodified	_RSTAYGWVI_					0	0	0		chr9:94441099-94451456|15|11.67|0.45|4.7|+|0|MFSD14B,MFSD14B|1	chr9:94441099-94451456|15|11.67|0.45|4.7|+|0|MFSD14B,MFSD14B|1	chr9:94441099-94451456|15|11.67|0.45|4.7|+|0|MFSD14B,MFSD14B|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.780029296875	2	526.779816	1051.54508	-1.1643	-0.00061331	1.2696	0.00066882	0.10537	5.5508E-05	526.7803385360115	62.777	0.9392	62.777	62.472	63.411	0					104	43	3	0	0	0	0.35373	1	5498	5498		60.972	3.1607	1	461120			51816	533	34686	34699	58502	58502					0.021368761630810695
RSTEDGWDFET	11	Unmodified	_RSTEDGWDFET_					0	0	0			REV__ENSG00000079432|ENST00000681038|CIC	REV__ENSG00000079432|ENST00000681038|CIC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7877502441406	3	448.189718	1341.54732	-0.87953	-0.0003942	-2.6267	-0.0011773	-3.5063	-0.0015715	448.18832457138564	38.136	0.35672	38.478	38.341	38.697	0.34187					13	8	2	0	0	0	0.17648	1	3147	3147		7.6794	0	1	211820	+		51817	16784	34687	34700	58503	58503					-0.10978784680401077
RSTEKLSSN	9	Unmodified	_RSTEKLSSN_					0	0	0			REV__ENST00000411999.1_1_2:197893450-197893558:-|nuORF	REV__ENST00000411999.1_1_2:197893450-197893558:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.29071044921875	2	511.26727	1020.51999	0.12176	6.2253E-05	3.998	0.0020441	4.1198	0.0021063	511.2690918727926	52.83	0.45472	53.254	53.012	53.467	0.42348					24	10	3	0	0	0	0.20789	1	5336	5336		24.519	7.1542	1	392600	+		51818	26371	34688	34701	58504	58504					0.010547765698674993
RSTGKLSK	8	Unmodified	_RSTGKLSK_					0	0	0		nc|ENSG00000172995|Q9UBL0-4|ARPP21;nc|ENSG00000172995|Q9UBL0|ARPP21;nc|ENSG00000172995|Q9UBL0-3|ARPP21;ENSG00000172995|ENST00000684406|ARPP21	nc|ENSG00000172995|Q9UBL0-4|ARPP21	nc|ENSG00000172995|Q9UBL0-4|ARPP21	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2625427246094	2	438.766709	875.518865	-1.8318	-0.00080375	-1.4505	-0.00063642	-3.2823	-0.0014402	438.76568756709804	43.232	0.53068	43.232	43.135	43.665	0					17	12	2	0	0	0	0.4196	1	3070	3070		8.6937	0	1	43146			51819	6815	34689	34702	58505	58505					0.07612606991619941
RSTGLTMFKLF	11	Unmodified	_RSTGLTMFKLF_					0	0	0			REV__nc|ENSG00000162441|Q8WZA0-2|LZIC	REV__nc|ENSG00000162441|Q8WZA0-2|LZIC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.75323486328125	3	434.240919	1299.70093	-0.93057	-0.00040409	-3.0055	-0.0013051	-3.9361	-0.0017092	434.5739914242388	61.994	0.13039	62.382	62.274	62.404	0.38846					4	2	2	0	0	0	0.17705	1	6622	6622		20.315	11.103	1	16918	+		51820	29974	34690	34703	58506	58506					0.06306578622184134
RSTILLLKQGH	11	Unmodified	_RSTILLLKQGH_					0	0	0			REV__ENSG00000165572|ENST00000379485|KBTBD6	REV__ENSG00000165572|ENST00000379485|KBTBD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5916442871094	3	422.594461	1264.76155	-0.62547	-0.00026432	-2.6174	-0.0011061	-3.2429	-0.0013704	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.7896	1	4972	4972		13.508	0	1	1069500	+		51821	21196	34691	34704	58507	58507					0.13976431996798055
RSTKVGLI	8	Unmodified	_RSTKVGLI_					0	0	0			REV__ENSG00000105550|ENST00000593756|FGF21	REV__ENSG00000105550|ENST00000593756|FGF21	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.265625	2	437.279452	872.544351	2.8863	0.0012621	3.0935	0.0013527	5.9798	0.0026148	437.28033653576625	25.643	0.42109	25.212	24.851	25.272	-0.4311					14	9	2	0	0	0	0.4196	1	1332	1332		16.473	0	1	154550	+		51822	17550	34692	34705	58508	58508					0.10298081514042678
RSTLERNL	8	Unmodified	_RSTLERNL_					0	0	0			REV__ENST00000473880.5_1_7:102106264-102108393:+|nuORF	REV__ENST00000473880.5_1_7:102106264-102108393:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.78009033203125	2	494.780348	987.546142	-0.78615	-0.00038897	0.80482	0.00039821	0.018664	9.2345E-06	494.78060020608814	86.18	3.7368	86.627	85.355	89.092	0.44736					160	91	3	0	0	0	0.90089	1	10178	10178		39.253	3.6345	1	656610	+		51823	20760	34693	34706	58509	58509					0.051870905319901794
RSTLLELE	8	Unmodified	_RSTLLELE_					0	0	0		ENSG00000168275|ENST00000366615|COA6	ENSG00000168275|ENST00000366615|COA6	ENSG00000168275|ENST00000366615|COA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.27154541015625	2	480.771657	959.528761	0.24382	0.00011722	0.048434	2.3286E-05	0.29225	0.00014051	480.7714939481177	40.905	0.58658	40.986	40.702	41.288	0.081345					34	21	2	0	0	0	0.92973	1	2652	2652		50.025	0	1	275580			51824	6387	34694	34707	58510	58510					0.047377502063341126
RSTPGSLLAGT	11	Unmodified	_RSTPGSLLAGT_					0	0	0			REV__ENST00000588774.1_1_17:73839881-73840376:-|nuORF	REV__ENST00000588774.1_1_17:73839881-73840376:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.29345703125	2	530.293288	1058.57202	1.6334	0.0008662	-1.7145	-0.0009092	-0.081076	-4.2994E-05	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.68532	1	10770	10770		33.922	1.1092	1	1816400	+		51825	29146	34695	34708	58511	58511					0.04507939983614051
RSTPRRIP	8	Unmodified	_RSTPRRIP_					0	0	0		ENST00000526262.5_1_11:70189825-70228249:+|nuORF;ENST00000532504.5_1_11:70185286-70228249:+|nuORF;nc|ENSG00000131626|Q13136-2|PPFIA1;ENSG00000131626|ENST00000253925|PPFIA1	ENST00000526262.5_1_11:70189825-70228249:+|nuORF	ENST00000526262.5_1_11:70189825-70228249:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7953186035156	2	491.798875	981.583196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.001	1	60.033	59.533	60.533	0.032822								0	0	0	0.29871	1	5566	5566		23.042	0	1				51826	3739	34696	34709	58512	58512					0.09166806868415733
RSTPWGIGF	9	Unmodified	_RSTPWGIGF_					0	0	0			REV__ENST00000272641.3_1_2:139428982-139429174:-|nuORF	REV__ENST00000272641.3_1_2:139428982-139429174:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.28662109375	2	510.766709	1019.51886	-0.44484	-0.00022721	-2.1771	-0.001112	-2.6219	-0.0013392	511.26519447276746	42.186	0.23523	42.191	41.989	42.224	0.0043983					7	5	2	0	0	0	0.20789	1	2790	2790		24.203	0	1	82834	+		51827	24548	34697	34710	58513	58513					0.00988606991609231
RSTQVLVVK	9	Unmodified	_RSTQVLVVK_					0	0	0		ENSG00000177558|ENST00000324675|FAM187B	ENSG00000177558|ENST00000324675|FAM187B	ENSG00000177558|ENST00000324675|FAM187B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.32177734375	2	515.324391	1028.63423	-0.33248	-0.00017134	0.16598	8.5532E-05	-0.1665	-8.5804E-05	515.3244198321188	28.104	0.37555	28.007	27.885	28.261	-0.096945					17	8	3	0	0	0	0.76255	1	1686	1686		35.618	0.46626	1	48502			51828	7147	34698	34711	58514	58514					0.1210571112260368
RSTQVLVVK	9	Unmodified	_RSTQVLVVK_					0	0	0		ENSG00000177558|ENST00000324675|FAM187B	ENSG00000177558|ENST00000324675|FAM187B	ENSG00000177558|ENST00000324675|FAM187B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	515.324391	1028.63423	1.1485	0.00059183	-1.6794	-0.00086545	-0.53096	-0.00027362	515.3233379850643	28.234	0.47492	28.026	27.856	28.331	-0.20717	0.0094331	-0.00091294	NaN	35.618	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59297			51829	7147	34698	34711							0.1210571112260368
RSTRARGSVS	10	Unmodified	_RSTRARGSVS_					0	0	0			REV__ENST00000590717.1_1_19:36035753-36035843:-|nuORF	REV__ENST00000590717.1_1_19:36035753-36035843:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.8010864257812	2	538.799603	1075.58465	0.32077	0.00017283	-0.72481	-0.00039053	-0.40403	-0.00021769	538.7994833411234	19.06	0.28986	18.584	18.358	18.648	-0.47621					9	6	2	0	0	0	0.37624	1	446	446		11.636	0	1	26889	+		51830	29189	34699	34712	58515	58515					0.04988396166504572
RSTRPTQQF	9	Unmodified	_RSTRPTQQF_					0	0	0		nc|ENSG00000083544|Q9H7E2-2|TDRD3;chr13:60483846-60485802|46|13.52|0.65|4.38|+|ENST00000621840|TDRD3,TDRD3;nc|ENSG00000083544|Q9H7E2|TDRD3;ENSG00000083544|ENST00000377881|TDRD3	nc|ENSG00000083544|Q9H7E2-2|TDRD3	nc|ENSG00000083544|Q9H7E2-2|TDRD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.7970581054688	2	560.796529	1119.5785	-1.155	-0.00064771	2.8613	0.0016046	1.7063	0.00095688	560.7983884514101	80.579	0.50169	80.641	80.376	80.877	0.062233					29	13	3	0	0	0	0.51592	1	7904	7904		51.193	1.1682	1	123490			51831	159	34700	34713	58516	58516					0.023498779349893084
RSTSGTTKLM	10	Unmodified	_RSTSGTTKLM_					0	0	0		ENST00000543774.6_1_16:31138525-31138642:+|nuORF	ENST00000543774.6_1_16:31138525-31138642:+|nuORF	ENST00000543774.6_1_16:31138525-31138642:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.2889404296875	2	541.287148	1080.55974	0.90507	0.0004899	-4.0867	-0.0022121	-3.1816	-0.0017222	541.2848148372841	20.292	0.81443	20.271	20.029	20.843	-0.020922					88	41	3	0	0	0	0.86587	1	466	466		29.17	2.1227	1	521470			51832	13561	34701	34714	58517	58517					0.022685802489149864
RSTTKVALSN	10	Unmodified	_RSTTKVALSN_					0	0	0		nc|ENSG00000049192|Q9UKP5-3|ADAMTS6;nc|ENSG00000049192|Q9UKP5-4|ADAMTS6;ENST00000470597.5_1_5:64558740-64769500:-|nuORF;nc|ENSG00000049192|Q9UKP5-2|ADAMTS6;ENSG00000049192|ENST00000381055|ADAMTS6	nc|ENSG00000049192|Q9UKP5-3|ADAMTS6	nc|ENSG00000049192|Q9UKP5-3|ADAMTS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.8067016601562	2	538.806562	1075.59857	0.74987	0.00040403	-0.4983	-0.00026849	0.25156	0.00013554	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.8545	1	9166	9166		36.447	3.6343	1	840570			51833	14748	34702	34715	58518	58518					0.06379628874969967
RSTTKVALSN	10	Unmodified	_RSTTKVALSN_					0	0	0		nc|ENSG00000049192|Q9UKP5-3|ADAMTS6;nc|ENSG00000049192|Q9UKP5-4|ADAMTS6;ENST00000470597.5_1_5:64558740-64769500:-|nuORF;nc|ENSG00000049192|Q9UKP5-2|ADAMTS6;ENSG00000049192|ENST00000381055|ADAMTS6	nc|ENSG00000049192|Q9UKP5-3|ADAMTS6	nc|ENSG00000049192|Q9UKP5-3|ADAMTS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.8063354492188	2	538.806562	1075.59857	-1.4886	-0.00080208	1.7597	0.00094812	0.27105	0.00014604	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.86587	1	8947	8947		29.17	1.2878	1	783690			51834	14748	34702	34715	58519	58519					0.06379628874969967
RSTTPKLTK	9	Unmodified	_RSTTPKLTK_					0	0	0			REV__ENST00000398145.6_2_22:26877761-26877860:-|nuORF	REV__ENST00000398145.6_2_22:26877761-26877860:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3126220703125	2	516.314023	1030.61349	0.65847	0.00033998	-0.85995	-0.000444	-0.20148	-0.00010403	516.3134870113196	32.951	1.4307	33.121	32.721	34.151	0.16971					82	33	3	0	0	0	0.36616	2	2362	2362;2380		60.118	10.677	1	426400	+		51835	26196	34703	34716	58520;58521	58520					0.09941120742928433
RSTTPKLTK	9	Unmodified	_RSTTPKLTK_					0	0	0			REV__ENST00000398145.6_2_22:26877761-26877860:-|nuORF	REV__ENST00000398145.6_2_22:26877761-26877860:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.31298828125	2	516.314023	1030.61349	0.62951	0.00032503	-1.1495	-0.00059351	-0.51999	-0.00026848	516.313424955158	31.968	1.9583	32.075	31.334	33.292	0.10707					88	45	3	0	0	0	0.7932	1	2193	2193		22.58	1.6327	1	546410	+		51836	26196	34703	34716	58522	58522					0.09941120742928433
RSTTPKLTK	9	Unmodified	_RSTTPKLTK_					0	0	0			REV__ENST00000398145.6_2_22:26877761-26877860:-|nuORF	REV__ENST00000398145.6_2_22:26877761-26877860:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	516.314023	1030.61349	-0.37865	-0.0001955	-0.87208	-0.00045027	-1.2507	-0.00064577	516.3137193272029	33.009	0.52468	33.062	32.834	33.359	0.05246	-0.029484	-1.1789E-05	NaN	60.118	36	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71640	+		51837	26196	34703	34716							0.09941120742928433
RSTVRAPP	8	Unmodified	_RSTVRAPP_					0	0	0			REV__ENST00000394081.7_1_17:38498766-38498895:+|nuORF	REV__ENST00000394081.7_1_17:38498766-38498895:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2406311035156	2	442.259051	882.503549	-1.4192	-0.00062767	1.5444	0.00068302	0.12515	5.535E-05	442.25967189360256	83.469	1.3308	83.634	82.804	84.134	0.1651					47	30	2	0	0	0	0.4196	1	7968	7968		24.203	14.497	1	62696	+		51838	26073	34704	34717	58523	58523					0.057597401944121884
RSTWPHWNGGD	11	Unmodified	_RSTWPHWNGGD_					0	0	0		ENSG00000166866|ENST00000300119|MYO1A	ENSG00000166866|ENST00000300119|MYO1A	ENSG00000166866|ENST00000300119|MYO1A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26324462890625	3	438.198771	1311.57448	0.05128	2.2471E-05	-3.7587	-0.0016471	-3.7075	-0.0016246	438.19763271079984	35.559	0.18488	35.499	35.42	35.605	-0.060333					6	4	2	0	0	0	0.17272	1	1888	1888		20.315	0.68808	1	22520			51839	6239	34705	34718	58524	58524					-0.06884211558735842
RSVAGSKK	8	Unmodified	_RSVAGSKK_					0	0	0		ENSG00000180357|ENST00000326648|ZNF609;nc|ENSG00000180357|O15014-2|ZNF609	ENSG00000180357|ENST00000326648|ZNF609	ENSG00000180357|ENST00000326648|ZNF609	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.7552795410156	2	416.753601	831.49265	0.44827	0.00018682	3.2079	0.0013369	3.6562	0.0015237	416.75482420878427	69.04	0.8387	69.169	68.79	69.629	0.12838					83	36	3	0	0	0	0.86288	2	6271	6266;6271		31.955	2.5934	1	1117600			51840	7328	34706	34719	58525;58526	58526					0.07016337820130047
RSVALLFK	8	Unmodified	_RSVALLFK_					0	0	0			REV__ENST00000541294.1_1_18:33739943-33744659:+|nuORF	REV__ENST00000541294.1_1_18:33739943-33744659:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.7973327636719	2	467.297645	932.580737	0.049408	2.3088E-05	3.84	0.0017944	3.8894	0.0018175	467.2994419831077	18.775	0.39968	18.841	18.639	19.039	0.066296					32	19	2	0	0	0	0.4196	1	375	375		21.96	6.3181	1	297980	+		51841	19162	34707	34720	58527	58527					0.11174958410765612
RSVEGRPL	8	Unmodified	_RSVEGRPL_					0	0	0		ENSG00000108582|ENST00000225719|CPD	ENSG00000108582|ENST00000225719|CPD	ENSG00000108582|ENST00000225719|CPD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79290771484375	2	457.264333	912.514114	0.92658	0.00042369	-1.566	-0.00071608	-0.63944	-0.00029239	457.26257787317434	36.923	0.16753	37.408	37.325	37.492	0.48581					5	3	2	0	0	0	0.4196	1	2950	2950		29.15	3.6994	1	26479			51842	2419	34708	34721	58528	58528					0.05435722848869773
RSVFGLGP	8	Unmodified	_RSVFGLGP_					0	0	0			REV__ENST00000567819.1_1_2:241525231-241525429:-|nuORF	REV__ENST00000567819.1_1_2:241525231-241525429:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.73638916015625	2	416.73742	831.460287	1.1926	0.00049701	-2.2076	-0.00091997	-1.0149	-0.00042296	416.73649279228607	34.708	1.0492	34.918	34.769	35.819	0.21003					42	26	4	0	0	0	0.84341	1	2602	2602		24.203	0	1	2080600	+		51843	28887	34709	34722	58529	58529					0.03781550417147628
RSVHSLVLLLE	11	Unmodified	_RSVHSLVLLLE_					0	0	0			REV__ENST00000315266.9_1_14:67648077-67648284:+|nuORF	REV__ENST00000315266.9_1_14:67648077-67648284:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5932922363281	3	422.590717	1264.75032	1.3012	0.00054986	3.2682	0.0013811	4.5693	0.001931	422.59197853531197	58.619	1.7414	58.653	57.951	59.692	0.033905					114	50	3	0	0	0	0.74022	1	5435	5435		24.232	2.5461	1	112420	+		51844	24945	34710	34723	58530	58530					0.12853609902640528
RSVIDAGH	8	Unmodified	_RSVIDAGH_					0	0	0			REV__nc|ENSG00000047849|P27816-6|MAP4	REV__nc|ENSG00000047849|P27816-6|MAP4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	427.30291748046875	2	427.727584	853.440614	-1.7255	-0.00073803	-0.86481	-0.0003699	-2.5903	-0.0011079	427.7270534659483	63.077	1.1204	63.19	62.654	63.774	0.11389					61	56	2	0	0	0	0.4196	1	5494	5494		17.365	5.8539	1	115080	+		51845	29685	34711	34724	58531	58531					0.008031744063828228
RSVIGLVTK	9	Unmodified	_RSVIGLVTK_					0	0	0			REV__nc|ENSG00000290649|Q8NH63|OR51H1	REV__nc|ENSG00000290649|Q8NH63|OR51H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.8130187988281	2	486.813659	971.612765	-0.21818	-0.00010621	-0.20428	-9.9448E-05	-0.42247	-0.00020566	486.8134859363653	32.309	0.98692	32.435	32.073	33.06	0.12642					70	22	5	0	0	0	0.086373	1	2228	2228		95.815	0	1	4653700	+		51846	30295	34712	34725	58532	58532					0.12582326093900065
RSVIWVLK	8	Unmodified	_RSVIWVLK_					0	0	0			REV__nc|ENSG00000138764|Q16589-2|CCNG2	REV__nc|ENSG00000138764|Q16589-2|CCNG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.81842041015625	2	500.818744	999.622936	-1.4085	-0.00070541	1.3017	0.00065192	-0.10681	-5.3494E-05	500.8192459155419	47.272	1.0396	47.743	47.388	48.428	0.4714					58	25	3	0	0	0	0.87259	2	4508	4484;4508		58.782	5.4305	1	1221300	+		51847	19503	34713	34726	58533;58534	58534					0.12310933819117054
RSVIWVLK	8	Unmodified	_RSVIWVLK_					0	0	0			REV__nc|ENSG00000138764|Q16589-2|CCNG2	REV__nc|ENSG00000138764|Q16589-2|CCNG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.81805419921875	2	500.818744	999.622936	-0.81854	-0.00040994	0.69848	0.00034981	-0.12006	-6.013E-05	500.81893393080526	47.121	1.0928	48.045	47.651	48.744	0.92315					64	26	3	0	0	0	0.89494	2	4511	4498;4511		44.117	6.9577	1	1164300	+		51848	19503	34713	34726	58535;58536	58536					0.12310933819117054
RSVLCVMLL	9	Carbamidomethyl (C),Oxidation (M)	_RSVLC(Carbamidomethyl (C))VM(Oxidation (M))LL_	RSVLC(1)VMLL	RSVLCVM(1)LL	RSVLC(77)VMLL	RSVLCVM(77)LL	0	1	1		nc|ENSG00000085831|Q5SRH9-3|TTC39A;ENSG00000085831|ENST00000680483|TTC39A;nc|ENSG00000085831|Q5SRH9-6|TTC39A;nc|ENSG00000085831|Q5SRH9-4|TTC39A;nc|ENSG00000085831|Q5SRH9|TTC39A	nc|ENSG00000085831|Q5SRH9-3|TTC39A	nc|ENSG00000085831|Q5SRH9-3|TTC39A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8118896484375	2	553.806662	1105.59877	-1.1742	-0.00065028	4.1002	0.0022707	2.926	0.0016204	553.8088317890525	59.066	0.82581	59.458	59.148	59.974	0.39209					47	19	4	0	0	0	0.18601	1	6236	6236		76.774	7.1465	1	1045800			51849	1541	34714	34727	58537	58537	20	32			0.050195892789815844
RSVLPEGPV	9	Unmodified	_RSVLPEGPV_					0	0	0		nc|ENSG00000107186|O75970-5|MPDZ;nc|ENSG00000107186|O75970-3|MPDZ;nc|ENSG00000107186|O75970-2|MPDZ;ENSG00000107186|ENST00000319217|MPDZ	nc|ENSG00000107186|O75970-5|MPDZ	nc|ENSG00000107186|O75970-5|MPDZ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.80218505859375	2	477.274367	952.53418	0.79446	0.00037917	-0.4849	-0.00023143	0.30955	0.00014774	477.27389391475486	50.545	0.57358	50.993	50.724	51.297	0.4476					22	13	2	0	0	0	0.20789	1	5012	5012		29.15	0	1	189860			51850	2334	34715	34728	58538	58538					0.05601473788806288
RSVMIRILAKH	11	Unmodified	_RSVMIRILAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.939453125	3	441.939575	1322.79689	-1.6349	-0.00072252	2.0849	0.00092142	0.45005	0.0001989	442.27488917327764	56.546	2.0203	56.546	56.188	58.209	0					207	89	3	0	0	0	0.79224	1	4874	4874		12.957	0.52465	1	695230	+		51851	19182	34716	34729	58539	58539					0.14840771252966078
RSVMIRILAKH	11	Unmodified	_RSVMIRILAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2740783691406	3	441.939575	1322.79689	-0.1083	-4.7863E-05	0.67692	0.00029916	0.56862	0.0002513	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.73277	1	4900	4900		25.892	3.3301	1	447080	+		51852	19182	34716	34729	58540	58540					0.14840771252966078
RSVMIRILAKH	11	Unmodified	_RSVMIRILAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.94110107421875	3	441.939575	1322.79689	0.44003	0.00019447	-0.0084567	-3.7373E-06	0.43157	0.00019073	441.9393914889037	56.404	2.26	56.437	55.731	57.991	0.033184					145	81	3	0	0	0	0.7896	1	5150	5150		13.508	1.0751	1	750870	+		51853	19182	34716	34729	58541	58541					0.14840771252966078
RSVMIRILAKH	11	Unmodified	_RSVMIRILAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9399719238281	3	441.939575	1322.79689	-1.4755	-0.00065207	2.0361	0.00089985	0.56067	0.00024778	441.9403125343586	55.224	1.199	55.287	54.704	55.903	0.063725					106	39	3	0	0	0	0.77205	1	4673	4673		17.167	2.4731	1	485540	+		51854	19182	34716	34729	58542	58542					0.14840771252966078
RSVMIRILAKH	11	Unmodified	_RSVMIRILAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9394226074219	3	441.939575	1322.79689	-1.4739	-0.00065135	1.8846	0.00083286	0.4107	0.0001815	441.94028424164003	56.309	0.61998	56.381	55.844	56.464	0.071835					69	31	3	0	0	0	0.75779	1	4707	4707		20.315	2.4819	1	795270	+		51855	19182	34716	34729	58543	58543					0.14840771252966078
RSVMIRILAKH	11	Unmodified	_RSVMIRILAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9396667480469	3	441.939575	1322.79689	-0.63553	-0.00028087	1.2017	0.00053107	0.56615	0.00025021	441.9399494564646	55.279	1.3349	55.243	54.43	55.765	-0.036823					107	41	3	0	0	0	0.76087	1	4658	4658		19.627	1.0959	1	409610	+		51856	19182	34716	34729	58544	58544					0.14840771252966078
RSVMIRILAKH	11	Unmodified	_RSVMIRILAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.2729187011719	3	441.939575	1322.79689	-0.53319	-0.00023564	1.2273	0.00054237	0.69406	0.00030673	441.9398578982981	52.556	1.1578	52.98	52.638	53.795	0.42348					71	27	3	0	0	0	0.17272	1	5358	5358		32.034	17.34	1	398930	+		51857	19182	34716	34729	58545	58545					0.14840771252966078
RSVMIRILAKH	11	Unmodified	_RSVMIRILAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	441.939575	1322.79689	-0.56713	-0.00025064	-4.705	-0.0020793	-5.2722	-0.00233	442.271862532317	53.271	0.19419	53.209	53.122	53.316	-0.062061	0.10789	-0.0071585	NaN	32.034	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38493	+		51858	19182	34716	34729							0.14840771252966078
RSVPAVGRKKN	11	Unmodified	_RSVPAVGRKKN_					0	0	0			REV__nc|ENSG00000121210|A2VDJ0-2|TMEM131L	REV__nc|ENSG00000121210|A2VDJ0-2|TMEM131L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.872802734375	2	606.370195	1210.72584	-1.2685	-0.00076921	0.17559	0.00010647	-1.0929	-0.00066273	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.7434	1	9552	9552		23.523	0	1	823240	+		51859	29814	34717	34730	58546	58546					0.12890394539795125
RSVPPAPP	8	Unmodified	_RSVPPAPP_					0	0	0		ENSG00000167771|ENST00000301459|RCOR2	ENSG00000167771|ENST00000301459|RCOR2	ENSG00000167771|ENST00000301459|RCOR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.9073791503906	2	410.73742	819.460287	1.1547	0.00047429	-0.39803	-0.00016349	0.7567	0.0003108	410.7370692373326	23.681	0.46927	23.107	22.878	23.347	-0.57415					15	10	2	0	0	0	0.4196	1	1058	1058		31.955	1.4512	1	42093			51860	6330	34718	34731	58547	58547					0.043335504171295725
RSVPPAPP	8	Unmodified	_RSVPPAPP_					0	0	0		ENSG00000167771|ENST00000301459|RCOR2	ENSG00000167771|ENST00000301459|RCOR2	ENSG00000167771|ENST00000301459|RCOR2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	410.73742	819.460287	1.4278	0.00058646	-1.9183	-0.00078792	-0.49047	-0.00020145	410.73659508515465	23.721	0.42262	23.339	23.153	23.576	-0.38178	0.11597	-0.00026556	NaN	24.203	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44338			51861	6330	34718	34731							0.043335504171295725
RSVPPIQLY	9	Unmodified	_RSVPPIQLY_					0	0	0			REV__ENST00000575209.5_1_17:5386088-5389490:-|nuORF	REV__ENST00000575209.5_1_17:5386088-5389490:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.3310546875	2	536.811116	1071.60768	0.11728	6.2959E-05	0.20152	0.00010818	0.31881	0.00017114	536.8109355413915	31.835	0.38633	31.942	31.76	32.146	0.10707					12	8	2	0	0	0	0.20789	1	2195	2195		16.473	0	1	67309	+		51862	16660	34719	34732	58548	58548					0.07474022231281197
RSVRRRYRRWR	11	Unmodified	_RSVRRRYRRWR_					0	0	0		ENST00000488071.1_1_11:64494766-64496427:-|nuORF;ENST00000421556.5_1_11:64494482-64496427:-|nuORF;ENST00000464324.5_1_11:64494482-64496427:-|nuORF	ENST00000488071.1_1_11:64494766-64496427:-|nuORF	ENST00000488071.1_1_11:64494766-64496427:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.1756896972656	4	412.497633	1645.96143	0.31895	0.00013157	3.6647	0.0015117	3.9837	0.0016433	412.75036329016575	95.189	0.47038	95.608	95.354	95.824	0.41964					16	11	2	0	0	0	0.1841	1	11448	11448		0	0	1	257140			51863	11464	34720	34733	58549	58549					0.16428344507767179
RSVSAQMH	8	Oxidation (M)	_RSVSAQM(Oxidation (M))H_		RSVSAQM(1)H		RSVSAQM(44)H	0	0	1			REV__nc|ENSG00000187908|Q9UGM3-9|DMBT1	REV__nc|ENSG00000187908|Q9UGM3-9|DMBT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2255554199219	2	466.224351	930.434149	-0.39455	-0.00018395	3.3299	0.0015525	2.9354	0.0013686	466.22572947027686	79.005	1.1051	79.416	79.1	80.205	0.41059					49	25	3	0	0	0	0.91472	1	9029	9029		44.117	6.9577	1	1043700	+		51864	22961	34721	34734	58550	58550		350			-0.0338508681663825
RSVSQETF	8	Unmodified	_RSVSQETF_					0	0	0		nc|ENSG00000105879|Q75N03-2|CBLL1;ENSG00000105879|ENST00000440859|CBLL1	nc|ENSG00000105879|Q75N03-2|CBLL1	nc|ENSG00000105879|Q75N03-2|CBLL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.2685241699219	2	477.237981	952.461409	0.1507	7.192E-05	4.1492	0.0019802	4.2999	0.0020521	477.2397950504559	39.345	0.37814	39.315	38.985	39.363	-0.03027					11	8	2	0	0	0	0.4196	1	2699	2699		23.042	0	1	51817			51865	2260	34722	34735	58551	58551					-0.016722800046181874
RSVSRPPL	8	Unmodified	_RSVSRPPL_					0	0	0			REV__ENST00000526508.5_1_11:46695513-46695603:+|nuORF	REV__ENST00000526508.5_1_11:46695513-46695603:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30145263671875	2	456.274701	910.534849	-1.2648	-0.0005771	-4.2778	-0.0019518	-5.5426	-0.0025289	456.2726858718179	35.331	0.1282	35.367	35.315	35.443	0.035522					5	3	2	0	0	0	0.4196	1	1850	1850		27.882	2.4321	1	31364	+		51866	28209	34723	34736	58552	58552					0.07600313228522282
RSVTLAGVQ	9	Unmodified	_RSVTLAGVQ_					0	0	0		ENST00000560834.1_1_15:44751212-44776450:+|nuORF	ENST00000560834.1_1_15:44751212-44776450:+|nuORF	ENST00000560834.1_1_15:44751212-44776450:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7714538574219	2	465.771991	929.529429	0.14869	6.9257E-05	-0.33497	-0.00015602	-0.18628	-8.6764E-05	465.77176518409055	22.695	1.1216	22.084	21.633	22.755	-0.6107					64	27	4	0	0	0	0.059135	2	929	929;962		104.06	2.5969	1	2567600			51867	13820	34724	34737	58553;58554	58553					0.06184589646045424
RSVTTQTM	8	Oxidation (M)	_RSVTTQTM(Oxidation (M))_		RSVTTQTM(1)		RSVTTQTM(49)	0	0	1			REV__ENST00000451713.5_1_10:20011104-20017382:-|nuORF	REV__ENST00000451713.5_1_10:20011104-20017382:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.22991943359375	2	470.231842	938.44913	-0.58949	-0.0002772	-2.7589	-0.0012973	-3.3484	-0.0015745	470.2304404672262	21.106	0.55865	20.478	20.162	20.721	-0.62834					29	14	3	0	0	0	0.9283	1	732	732		49.442	13.823	1	86765	+		51868	26887	34725	34738	58555	58555					-0.022556397393032057
RSVTWPHI	8	Unmodified	_RSVTWPHI_					0	0	0			REV__ENST00000367066.7_1_6:159465043-159465931:-|nuORF	REV__ENST00000367066.7_1_6:159465043-159465931:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.283935546875	2	498.274701	994.534849	0.044572	2.2209E-05	-1.0805	-0.00053839	-1.0359	-0.00051618	498.2740418661219	67.179	0.52628	67.564	67.299	67.825	0.38515					22	15	2	0	0	0	0.4196	1	7337	7337		27.882	3.6795	1	261970	+		51869	25546	34726	34739	58556	58556					0.037363132285236134
RSVVPRDV	8	Unmodified	_RSVVPRDV_					0	0	0		ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2536315917969	2	464.272158	926.529764	-1.1266	-0.00052306	1.0906	0.00050635	-0.036005	-1.6716E-05	464.27246083568696	87.994	1.4969	87.994	87.294	88.791	0					48	34	2	0	0	0	0.4196	1	8356	8356		16.473	0	1	112140			51870	7047	34727	34740	58557	58557					0.06356009365902082
RSVVPRDV	8	Unmodified	_RSVVPRDV_					0	0	0		ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	464.272158	926.529764	-0.12054	-5.5965E-05	-0.17085	-7.9319E-05	-0.29139	-0.00013528	464.2718752334903	87.935	1.5157	88.003	87.357	88.873	0.067711	0.047465	6.6479E-05	NaN	25.574	61	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143990			51871	7047	34727	34740							0.06356009365902082
RSVVPRDV	8	Unmodified	_RSVVPRDV_					0	0	0		ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	464.272158	926.529764	1.1517	0.00053469	-1.4286	-0.00066326	-0.27694	-0.00012857	464.27126696981173	87.889	1.7572	87.815	87.119	88.876	-0.074005	-0.13977	-0.0011014	NaN	25.574	72	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	175120			51872	7047	34727	34740							0.06356009365902082
RSVVPRDV	8	Unmodified	_RSVVPRDV_					0	0	0		ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	464.272158	926.529764	-1.0506	-0.00048777	0.0052774	2.4502E-06	-1.0453	-0.00048532	464.27240949726894	87.707	1.0116	87.908	87.414	88.425	0.20114	-0.047258	0.00023002	NaN	25.574	44	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	202160			51873	7047	34727	34740							0.06356009365902082
RSVVPRDV	8	Unmodified	_RSVVPRDV_					0	0	0		ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	464.272158	926.529764	0.65148	0.00030246	-1.1409	-0.0005297	-0.48944	-0.00022723	464.2715811981601	87.878	1.0471	88.027	87.554	88.601	0.14956	0.072329	-0.00083428	NaN	25.574	44	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	155750			51874	7047	34727	34740							0.06356009365902082
RSVVPRDV	8	Unmodified	_RSVVPRDV_					0	0	0		ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	464.272158	926.529764	-1.7249	-0.00080081	1.2659	0.00058772	-0.45898	-0.00021309	464.27268025587875	87.621	1.1782	87.791	87.437	88.615	0.16923	-0.16446	0.0014005	NaN	25.574	41	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	174380			51875	7047	34727	34740							0.06356009365902082
RSVVPRDV	8	Unmodified	_RSVVPRDV_					0	0	0		ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	464.272158	926.529764	0.055854	2.5932E-05	-6.1882	-0.002873	-6.1324	-0.0028471	464.2716639200915	87.697	0.62379	88.143	87.849	88.473	0.44628	0.18792	-0.0055209	NaN	25.574	34	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	221320			51876	7047	34727	34740							0.06356009365902082
RSVVPRDV	8	Unmodified	_RSVVPRDV_					0	0	0		ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	ENSG00000175931|ENST00000319380|UBE2O	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	464.272158	926.529764	-1.2146	-0.0005639	-5.935	-0.0027554	-7.1496	-0.0033193	464.2721733192446	87.678	0.85829	88.141	87.853	88.711	0.46312	0.18562	-0.0052858	NaN	25.574	37	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171990			51877	7047	34727	34740							0.06356009365902082
RSVVRVGAV	9	Unmodified	_RSVVRVGAV_					0	0	0			REV__ENST00000448257.6_1_10:62538294-62538390:+|nuORF	REV__ENST00000448257.6_1_10:62538294-62538390:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2864685058594	2	471.795801	941.577048	0.77502	0.00036565	-1.1619	-0.00054819	-0.38691	-0.00018254	471.7952729856694	102.2	1.0115	102.33	101.85	102.86	0.13523					28	24	2	0	0	0	0.20789	1	10760	10760		2.7184	0	1	117800	+		51878	26834	34728	34741	58558	58558					0.10392288636910507
RSVYSSFFAWF	11	Unmodified	_RSVYSSFFAWF_					0	0	0		ENSG00000127995|ENST00000297273|CASD1	ENSG00000127995|ENST00000297273|CASD1	ENSG00000127995|ENST00000297273|CASD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7348937988281	3	466.227667	1395.66117	0.21714	0.00010124	-2.1639	-0.0010089	-1.9467	-0.00090761	466.2264259306339	23.777	0.77575	23.395	23.018	23.794	-0.38178					20	17	2	0	0	0	0.17368	1	1106	1106		42.338	16.275	1	124890			51879	3523	34729	34742	58559	58559					-0.02083225056867377
RSWGAKLL	8	Unmodified	_RSWGAKLL_					0	0	0			REV__nc|ENSG00000186283|Q9H497-3|TOR3A	REV__nc|ENSG00000186283|Q9H497-3|TOR3A	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7776794433594	2	465.779619	929.544686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.975	1	79.975	79.475	80.475	0								0	0	0	0.30478	1	7370	7370		17.365	0.66	1		+		51880	22840	34730	34743	58560	58560					0.07709501233898663
RSWLRLEIPR	10	Unmodified	_RSWLRLEIPR_					0	0	0		ENST00000536896.2_1_1:26146164-26146353:-|nuORF	ENST00000536896.2_1_1:26146164-26146353:-|nuORF	ENST00000536896.2_1_1:26146164-26146353:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.5993957519531	3	442.598206	1324.77279	0.9415	0.00041671	1.9909	0.00088115	2.9323	0.0012979	442.59892389076134	48.942	1.6202	48.942	48.276	49.896	0.00016785					103	36	4	0	0	0	0.81117	1	4117	4117		38.754	0	1	343460			51881	13444	34731	34744	58561	58561					0.12339254090920804
RSWPLQTP	8	Unmodified	_RSWPLQTP_					0	0	0		ENST00000343820.9_1_18:3450362-3450488:+|nuORF	ENST00000343820.9_1_18:3450362-3450488:+|nuORF	ENST00000343820.9_1_18:3450362-3450488:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7950439453125	2	492.766709	983.518865	-0.59009	-0.00029078	1.7946	0.00088434	1.2046	0.00059357	492.76751055657843	54.395	0.2952	54.979	54.874	55.169	0.58474					9	6	2	0	0	0	0.4196	1	5540	5540		35.618	7.736	1	220270			51882	10282	34732	34745	58562	58562					0.026446069916119086
RSWRHLVKRQR	11	Unmodified	_RSWRHLVKRQR_					0	0	0		ENST00000484153.1_1_1:11826815-11837330:+|nuORF;ENSG00000215910|ENST00000688073|C1orf167;nc|nan|Q5SNV9-2|C1orf167;nc|nan|Q5SNV9-3|C1orf167	ENST00000484153.1_1_1:11826815-11837330:+|nuORF	ENST00000484153.1_1_1:11826815-11837330:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	507.96929931640625	3	507.971037	1520.89128	-0.52677	-0.00026758	-2.5208	-0.0012805	-3.0475	-0.0015481	507.9697227383378	16.604	0.60131	16.652	16.484	17.086	0.047802					78	25	5	0	0	0	0.80813	1	182	182		9.6461	0.84683	1	1148900			51883	8656	34733	34746	58563	58563					0.15167046119290717
RSWSPPARRGL	11	Unmodified	_RSWSPPARRGL_					0	0	0			REV__nc|ENSG00000230366|P59020|DSCR9	REV__nc|ENSG00000230366|P59020|DSCR9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.86083984375	2	641.859995	1281.70544	1.706	0.001095	-2.2759	-0.0014608	-0.56989	-0.00036579	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.41466	1	12993	12993		58.23	5.2932	1	27133000	+		51884	30218	34734	34747	58564	58564					0.0758522387998255
RSWSPPARRGL	11	Unmodified	_RSWSPPARRGL_					0	0	0			REV__nc|ENSG00000230366|P59020|DSCR9	REV__nc|ENSG00000230366|P59020|DSCR9	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	641.859995	1281.70544	-1.1527	-0.00073989	0.72318	0.00046418	-0.42954	-0.00027571	642.361686184706	113.12	0.23484	113.09	112.99	113.22	-0.032333	0.1044	0.0039541	NaN	58.23	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12111000	+		51885	30218	34734	34747							0.0758522387998255
RSWSSLVP	8	Unmodified	_RSWSSLVP_					0	0	0			REV__ENST00000472605.1_1_9:35810632-35811933:-|nuORF	REV__ENST00000472605.1_1_9:35810632-35811933:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2547912597656	2	466.253434	930.492316	0.14963	6.9764E-05	0.4386	0.0002045	0.58823	0.00027426	466.2534991696802	60.959	1.2686	60.926	59.804	61.072	-0.032509					71	38	2	0	0	0	0.91977	1	5732	5732		45.952	5.3793	1	239520	+		51886	27265	34735	34748	58565	58565					0.024289181002927762
RSWVIGSP	8	Unmodified	_RSWVIGSP_					0	0	0		nc|ENSG00000086015|Q6P0Q8-2|MAST2;ENSG00000086015|ENST00000361297|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	nc|ENSG00000086015|Q6P0Q8-2|MAST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2481689453125	2	451.248152	900.481751	-0.60944	-0.00027501	2.0486	0.00092444	1.4392	0.00064943	451.24890898084885	67.67	1.2739	67.634	67.25	68.524	-0.035698					111	49	3	0	0	0	0.88601	1	6544	6544		34.173	0	1	185140			51887	1550	34736	34749	58566	58566					0.02752935445857929
RSWVSPAS	8	Unmodified	_RSWVSPAS_					0	0	0		ENST00000390666.3_1_5:112769335-112769695:-|nuORF	ENST00000390666.3_1_5:112769335-112769695:-|nuORF	ENST00000390666.3_1_5:112769335-112769695:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	444.2453918457031	2	445.229959	888.445365	4.6139	0.0020543	3.3718	0.0015012	7.9857	0.0035555	445.2315664443944	106.99	0.70118	107.14	106.79	107.49	0.14929					58	21	4	0	0	0	0.4196	1	13087	13087		15.642	1.5047	1	1074700			51888	10996	34737	34750	58567	58567					-0.0033194145086099525
RSWVSPAS	8	Unmodified	_RSWVSPAS_					0	0	0		ENST00000390666.3_1_5:112769335-112769695:-|nuORF	ENST00000390666.3_1_5:112769335-112769695:-|nuORF	ENST00000390666.3_1_5:112769335-112769695:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	445.229959	888.445365	-0.14827	-6.6016E-05	7.9151	0.003524	7.7668	0.003458	445.23340945064064	107.27	0.62212	107.23	107.04	107.66	-0.034409	0.057405	0.001515	NaN	15.642	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107600			51889	10996	34737	34750							-0.0033194145086099525
RSWVSPAS	8	Unmodified	_RSWVSPAS_					0	0	0		ENST00000390666.3_1_5:112769335-112769695:-|nuORF	ENST00000390666.3_1_5:112769335-112769695:-|nuORF	ENST00000390666.3_1_5:112769335-112769695:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	445.229959	888.445365	2.7428	0.0012212	5.36	0.0023865	8.1028	0.0036076	445.232123279023	107.26	0.62433	107.23	106.88	107.51	-0.034134	0.05565	-0.00076016	NaN	15.642	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	131350			51890	10996	34737	34750							-0.0033194145086099525
RSWVSPAS	8	Unmodified	_RSWVSPAS_					0	0	0		ENST00000390666.3_1_5:112769335-112769695:-|nuORF	ENST00000390666.3_1_5:112769335-112769695:-|nuORF	ENST00000390666.3_1_5:112769335-112769695:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	445.229959	888.445365	1.6294	0.00072547	7.566	0.0033686	9.1955	0.0040941	445.232895653337	107.11	0.66716	107.14	106.76	107.43	0.035622	-0.030001	0.0012042	NaN	15.642	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	226600			51891	10996	34737	34750							-0.0033194145086099525
RSWVSPAS	8	Unmodified	_RSWVSPAS_					0	0	0		ENST00000390666.3_1_5:112769335-112769695:-|nuORF	ENST00000390666.3_1_5:112769335-112769695:-|nuORF	ENST00000390666.3_1_5:112769335-112769695:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	445.229959	888.445365	0.74731	0.00033273	7.118	0.0031691	7.8653	0.0035019	445.23303928081754	107.05	0.50834	107.14	106.91	107.42	0.091255	-0.034134	0.00080523	NaN	15.642	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	230730			51892	10996	34737	34750							-0.0033194145086099525
RSYDEQLRL	9	Unmodified	_RSYDEQLRL_					0	0	0		ENST00000487527.5_1_17:27916841-27940597:+|nuORF;ENSG00000198720|ENST00000394859|ANKRD13B;nc|ENSG00000198720|Q86YJ7-2|ANKRD13B	ENST00000487527.5_1_17:27916841-27940597:+|nuORF	ENST00000487527.5_1_17:27916841-27940597:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.3101196289062	2	590.309469	1178.60439	-0.45326	-0.00026756	0.67408	0.00039792	0.22083	0.00013036	590.309789757865	32.515	0.5012	32.526	32.269	32.77	0.010899					34	13	3	0	0	0	0.69624	1	1830	1830		40.778	2.9666	1	121810			51893	8313	34738	34751	58568	58568					0.022227273866064934
RSYGVQDN	8	Unmodified	_RSYGVQDN_					0	0	0			REV__ENSG00000108001|ENST00000440978|EBF3	REV__ENSG00000108001|ENST00000440978|EBF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7227783203125	2	469.719956	937.425358	-1.6161	-0.00075913	2.3425	0.0011003	0.72633	0.00034117	469.720976535861	88.09	0.19664	88.553	88.437	88.634	0.46311					7	4	2	0	0	0	0.4196	1	10394	10394		10.265	0	1	59491	+		51894	17688	34739	34752	58569	58569					-0.04585737181480454
RSYHNRCCE	9	Unmodified	_RSYHNRCCE_					0	0	0		ENST00000329363.8_1_22:50970527-50970982:-|nuORF	ENST00000329363.8_1_22:50970527-50970982:-|nuORF	ENST00000329363.8_1_22:50970527-50970982:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.2448120117188	2	584.242749	1166.47095	-1.7222	-0.0010062	3.8721	0.0022623	2.1499	0.0012561	584.2448524221044	60.063	1.1625	60.453	60.095	61.257	0.39077					80	31	3	0	0	0	0.69624	1	6402	6402		40.778	0.20554	1	4634700			51895	10097	34740	34753	58570	58570					-0.10563158262402794
RSYLEKRR	8	Unmodified	_RSYLEKRR_					0	0	0		ENSG00000121621|ENST00000263181|KIF18A	ENSG00000121621|ENST00000263181|KIF18A	ENSG00000121621|ENST00000263181|KIF18A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.28955078125	2	554.322714	1106.63087	-1.2239	-0.00067843	4.1195	0.0022835	2.8956	0.0016051	554.3257367652326	30.688	0.35496	30.717	30.495	30.85	0.028618					16	7	3	0	0	0	0.4196	1	1997	1997		37.812	17.815	1	57642			51896	3191	34741	34754	58571	58571					0.08182461068599878
RSYSDPPLK	9	Unmodified	_RSYSDPPLK_					0	0	0		ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7822875976562	2	531.782556	1061.55056	0.46378	0.00024663	-1.044	-0.00055518	-0.58021	-0.00030855	531.7820031077274	29.432	2.4582	29.343	28.288	30.746	-0.089544					170	57	5	0	0	0	0.13808	2	1855	1843;1855		85.862	9.0877	1	12586000			51897	6525	34742	34755	58572;58573	58573					0.022245549548870258
RSYSSVIEK	9	Unmodified	_RSYSSVIEK_					0	0	0		nc|ENSG00000142197|Q9Y3R5-2|DOP1B;ENSG00000142197|ENST00000691173|DOP1B	nc|ENSG00000142197|Q9Y3R5-2|DOP1B	nc|ENSG00000142197|Q9Y3R5-2|DOP1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.7871704101562	2	534.787838	1067.56112	-0.69596	-0.00037219	0.59964	0.00032068	-0.096316	-5.1509E-05	534.7880464305689	28.901	0.77129	28.872	28.443	29.214	-0.029207					39	17	3	0	0	0	0.3164	1	1785	1785		63.534	8.8115	1	533830			51898	4548	34743	34756	58574	58574					0.030045376093539744
RSYTYWWTP	9	Unmodified	_RSYTYWWTP_					0	0	0		ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.29541015625	2	630.29583	1258.57711	0.64029	0.00040357	1.2552	0.00079115	1.8955	0.0011947	630.2965544942194	23.374	0.99222	23.435	23.057	24.05	0.060431					84	35	3	0	0	0	0.76255	1	761	761		35.618	2.8059	1	334210			51899	2660	34744	34757	58575	58575					-0.04183756153793183
RSYVTTSTR	9	Unmodified	_RSYVTTSTR_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7828369140625	2	535.783087	1069.55162	0.65874	0.00035294	-0.81588	-0.00043714	-0.15714	-8.4193E-05	535.7824255492937	22.746	0.74695	22.327	22.016	22.763	-0.41879					49	17	5	0	0	0	0.052654	3	939	939;951;963		106.68	31.64	1	770610			51900	869	34745	34758	58576;58577;58578	58576					0.019627693237907806
RSYVTTSTR	9	Unmodified	_RSYVTTSTR_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7830200195312	2	535.783087	1069.55162	0.18014	9.6514E-05	-0.40548	-0.00021725	-0.22534	-0.00012073	535.7827337728459	22.797	0.71803	22.186	21.865	22.583	-0.6107					45	17	4	0	0	0	0.031397	3	957	947;957;969		117.53	21.335	1	1025900			51901	869	34745	34758	58579;58580;58581	58580					0.019627693237907806
RTAAENEFVG	10	Unmodified	_RTAAENEFVG_					0	0	0		ENSG00000185069|ENST00000332411|KRT76;CON__Q01546	ENSG00000185069|ENST00000332411|KRT76	ENSG00000185069|ENST00000332411|KRT76	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	547.2652587890625	2	547.26727	1092.51999	-1.5654	-0.00085671	1.1935	0.00065316	-0.37195	-0.00020355	547.2676914611375	27.923	0.32095	27.923	27.76	28.081	0					22	14	2	0	0	0	0.86218	1	1141	1141		32.812	2.3088	1	41232		+	51902	600	34746	34759	58582	58582					-0.022572234301378558
RTAAENEFVL	10	Unmodified	_RTAAENEFVL_					0	0	0		ENSG00000139648|ENST00000267119|KRT71;CON__Q3SY84;CON__Q9R0H5;CON__Q9DCV7	ENSG00000139648|ENST00000267119|KRT71;CON__Q9DCV7	ENSG00000139648|ENST00000267119|KRT71	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.2980346679688	2	575.29857	1148.58259	-0.88704	-0.00051031	-1.4347	-0.00082539	-2.3217	-0.0013357	575.2975755059318	42.721	0.6556	42.684	42.359	43.014	-0.036293					34	15	3	0	0	0	0.86272	1	3306	3306		24.519	0.99649	1	183420		+	51903	621;639	34747	34760	58583	58583					0.014239226380595937
RTAETAVRGPQ	11	Unmodified	_RTAETAVRGPQ_					0	0	0		ENST00000372189.7_1_9:134473602-134497247:-|nuORF;ENST00000414781.1_1_9:134473602-134479439:-|nuORF	ENST00000372189.7_1_9:134473602-134497247:-|nuORF	ENST00000372189.7_1_9:134473602-134497247:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.3217163085938	2	593.320368	1184.62618	0.35769	0.00021223	1.712	0.0010157	2.0697	0.001228	593.3215156818131	41.162	4.4397	41.235	40.577	45.017	0.073414					182	121	3	0	0	0	0.48313	2	2671	2671;2705		53.089	5.9515	1	2593200			51904	10690	34748	34761	58584;58585	58584					0.041255321351854946
RTAETAVRGPQ	11	Unmodified	_RTAETAVRGPQ_					0	0	0		ENST00000372189.7_1_9:134473602-134497247:-|nuORF;ENST00000414781.1_1_9:134473602-134479439:-|nuORF	ENST00000372189.7_1_9:134473602-134497247:-|nuORF	ENST00000372189.7_1_9:134473602-134497247:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3217163085938	2	593.320368	1184.62618	0.35222	0.00020898	1.7699	0.0010501	2.1221	0.0012591	593.3214955496583	41.16	1.5019	41.115	40.771	42.273	-0.045467					105	44	3	0	0	0	0.61824	1	2646	2646		42.338	0.91146	1	2608700			51905	10690	34748	34761	58586	58586					0.041255321351854946
RTAHLGAN	8	Unmodified	_RTAHLGAN_					0	0	0		nc|ENSG00000203618|P13224|GP1BB;nc|ENSG00000203618|P13224-2|GP1BB	nc|ENSG00000203618|P13224|GP1BB	nc|ENSG00000203618|P13224|GP1BB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2282409667969	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.85277	2	7956	7781;7956		38.806	5.2906	1	743780			51906	15203	34749	34762	58587;58588	58588					0.015265941262327942
RTAHLGAN	8	Unmodified	_RTAHLGAN_					0	0	0		nc|ENSG00000203618|P13224|GP1BB;nc|ENSG00000203618|P13224-2|GP1BB	nc|ENSG00000203618|P13224|GP1BB	nc|ENSG00000203618|P13224|GP1BB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2275085449219	2	420.227751	838.440949	2.4843	0.001044	-2.1218	-0.00089165	0.36244	0.00015231	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.87479	2	7968	7906;7968		38.806	3.8107	1	961790			51907	15203	34749	34762	58589;58590	58590					0.015265941262327942
RTAHLGAN	8	Unmodified	_RTAHLGAN_					0	0	0		nc|ENSG00000203618|P13224|GP1BB;nc|ENSG00000203618|P13224-2|GP1BB	nc|ENSG00000203618|P13224|GP1BB	nc|ENSG00000203618|P13224|GP1BB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2271423339844	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.89043	1	7561	7561		35.618	7.736	1	634680			51908	15203	34749	34762	58591	58591					0.015265941262327942
RTAHLGAN	8	Unmodified	_RTAHLGAN_					0	0	0		nc|ENSG00000203618|P13224|GP1BB;nc|ENSG00000203618|P13224-2|GP1BB	nc|ENSG00000203618|P13224|GP1BB	nc|ENSG00000203618|P13224|GP1BB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.22784423828125	2	420.227751	838.440949	0.39025	0.000164	-0.22921	-9.6321E-05	0.16104	6.7675E-05	420.2275761359418	78.73	4.4768	79.141	77.509	81.986	0.4106					178	106	2	0	0	0	0.91472	1	9132	9132		44.117	6.9577	1	423290			51909	15203	34749	34762	58592	58592					0.015265941262327942
RTAKFFIL	8	Unmodified	_RTAKFFIL_					0	0	0		nc|ENSG00000146090|Q8N431-2|RASGEF1C;ENSG00000146090|ENST00000361132|RASGEF1C	nc|ENSG00000146090|Q8N431-2|RASGEF1C	nc|ENSG00000146090|Q8N431-2|RASGEF1C	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.3059387207031	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.758	1	52.798	52.298	53.298	0.040592								0	0	0	0.29452	1	4275	4275		33.516	0	1				51910	4820	34750	34763	58593	58593					0.0988724492780193
RTAQGSEDEDM	11	Unmodified	_RTAQGSEDEDM_					0	0	0		ENST00000478117.5_1_1:16529010-16533481:-|nuORF;ENSG00000142632|ENST00000270747|ARHGEF19	ENST00000478117.5_1_1:16529010-16533481:-|nuORF	ENST00000478117.5_1_1:16529010-16533481:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.7520751953125	2	619.751324	1237.48809	1.6347	0.0010131	-1.3027	-0.00080737	0.33202	0.00020577	619.7504572575316	94.167	0.96803	94.599	94.393	95.361	0.4324					50	24	3	0	0	0	0.69248	1	11255	11255		32.751	2.2469	1	1473600			51911	4577	34751	34764	58594	58594					-0.12115003966255244
RTARASLV	8	Unmodified	_RTARASLV_					0	0	0			REV__nc|ENSG00000198089|A8K8P3-4|SFI1	REV__nc|ENSG00000198089|A8K8P3-4|SFI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2635192871094	2	437.266876	872.519199	-2.1366	-0.00093428	-0.53823	-0.00023535	-2.6749	-0.0011696	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.8347	1	719	719		23.042	3.6825	1	999210	+		51912	30144	34752	34765	58595	58595					0.07784026711476599
RTARATQKVF	10	Unmodified	_RTARATQKVF_					0	0	0		ENST00000406386.7_1_22:38170154-38170496:+|nuORF	ENST00000406386.7_1_22:38170154-38170496:+|nuORF	ENST00000406386.7_1_22:38170154-38170496:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3426513671875	2	589.343646	1176.67274	2.472	0.0014569	-3.7901	-0.0022337	-1.3181	-0.00077681	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.86763	1	10084	10084		26.693	1.1189	1	16740000			51913	11270	34753	34766	58596	58596					0.09147016757128767
RTARATQKVF	10	Unmodified	_RTARATQKVF_					0	0	0		ENST00000406386.7_1_22:38170154-38170496:+|nuORF	ENST00000406386.7_1_22:38170154-38170496:+|nuORF	ENST00000406386.7_1_22:38170154-38170496:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3427734375	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.8608	1	9675	9675		34.173	5.0025	1	17904000			51914	11270	34753	34766	58597	58597					0.09147016757128767
RTARPLVSELL	11	Unmodified	_RTARPLVSELL_					0	0	0		ENSG00000108684|ENST00000225823|ASIC2	ENSG00000108684|ENST00000225823|ASIC2	ENSG00000108684|ENST00000225823|ASIC2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.8836059570312	2	627.880062	1253.74557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.74	1	113.75	113.25	114.25	0.0011978								0	0	0	0.56276	1	13727	13727		18.262	1.5447	1				51915	2427	34754	34767	58598	58598					0.12884725759909088
RTARVISP	8	Unmodified	_RTARVISP_					0	0	0		ENST00000589596.5_2_18:13053024-13055797:+|nuORF	ENST00000589596.5_2_18:13053024-13055797:+|nuORF	ENST00000589596.5_2_18:13053024-13055797:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2744140625	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.87064	1	9162	9162		29.15	4.9468	1	26247000			51916	14240	34755	34768	58599	58599					0.08152313228526964
RTARVKDGE	9	Unmodified	_RTARVKDGE_					0	0	0			REV__ENSG00000185245|ENST00000329125|GP1BA	REV__ENSG00000185245|ENST00000329125|GP1BA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.2841186523438	2	516.283254	1030.55196	-0.37558	-0.00019391	4.2255	0.0021815	3.8499	0.0019876	516.2854646272209	36.825	0.56328	36.848	36.588	37.151	0.023624					25	14	2	0	0	0	0.76419	1	2064	2064		35.152	4.6484	1	135490	+		51917	22749	34756	34769	58600	58600					0.03790189043684222
RTATRARR	8	Unmodified	_RTATRARR_					0	0	0			REV__ENSG00000112234|ENST00000369244|FBXL4	REV__ENSG00000112234|ENST00000369244|FBXL4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.30078125	2	494.299573	986.584593	-0.82421	-0.00040741	3.2828	0.0016227	2.4586	0.0012153	494.3011394049625	97.613	4.008	97.613	96.986	100.99	0					359	95	6	0	0	0	0.87064	1	9915	9915		29.15	0.89528	1	29815000	+		51918	17929	34757	34770	58601	58601					0.09076440957176146
RTAVPSFLTK	10	Unmodified	_RTAVPSFLTK_					0	0	0		nc|ENSG00000122068|Q96QD9-3|FYTTD1;nc|ENSG00000122068|Q96QD9-2|FYTTD1;ENSG00000122068|ENST00000241502|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3245849609375	2	560.329673	1118.64479	0.001873	1.0495E-06	-1.5541	-0.0008708	-1.5522	-0.00086976	560.3286245420572	43.972	0.6899	44.423	44.083	44.773	0.45025					39	16	3	0	0	0	0.42808	1	4012	4012		61.765	0.79262	1	1352200			51919	3209	34758	34771	58602	58602					0.09021693777026485
RTAVPSFLTK	10	Unmodified	_RTAVPSFLTK_					0	0	0		nc|ENSG00000122068|Q96QD9-3|FYTTD1;nc|ENSG00000122068|Q96QD9-2|FYTTD1;ENSG00000122068|ENST00000241502|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	nc|ENSG00000122068|Q96QD9-3|FYTTD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3245849609375	2	560.329673	1118.64479	-1.3927	-0.00078036	-0.3426	-0.00019197	-1.7353	-0.00097233	560.329552713186	43.73	0.89241	44.504	44.064	44.956	0.7738					43	21	3	0	0	0	0.4503	1	3988	3988		59.931	1.1488	1	1031500			51920	3209	34758	34771	58603	58603					0.09021693777026485
RTAWTLIL	8	Unmodified	_RTAWTLIL_					0	0	0		ENST00000374492.7_1_20:33730205-33730271:-|nuORF	ENST00000374492.7_1_20:33730205-33730271:-|nuORF	ENST00000374492.7_1_20:33730205-33730271:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.29278564453125	2	487.295102	972.575651	-0.95022	-0.00046304	-3.0573	-0.0014898	-4.0076	-0.0019529	487.2934854308046	90.996	2.8908	91.042	90.474	93.365	0.046448					155	69	4	0	0	0	0.88185	1	9417	9417		32.812	2.3088	1	2321800			51921	10781	34759	34772	58604	58604					0.08826654548136048
RTAWTLIL	8	Unmodified	_RTAWTLIL_					0	0	0		ENST00000374492.7_1_20:33730205-33730271:-|nuORF	ENST00000374492.7_1_20:33730205-33730271:-|nuORF	ENST00000374492.7_1_20:33730205-33730271:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.29296875	2	487.295102	972.575651	-0.70314	-0.00034264	-3.2434	-0.0015805	-3.9466	-0.0019231	487.29338906256316	90.865	2.6767	91.083	90.551	93.228	0.21736					133	64	3	0	0	0	0.89043	1	9120	9120		35.618	7.5368	1	1731200			51922	10781	34759	34772	58605	58605					0.08826654548136048
RTCAQLLR	8	Unmodified	_RTCAQLLR_					0	0	0			REV__ENST00000500914.6_1_4:174090049-174090625:-|nuORF	REV__ENST00000500914.6_1_4:174090049-174090625:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.775390625	2	480.774011	959.533469	-0.89304	-0.00042935	-3.9101	-0.0018799	-4.8032	-0.0023092	480.77199336465685	41.06	0.54614	41.064	40.845	41.391	0.0043983					32	19	2	0	0	0	0.9295	1	2642	2642		55.504	2.1528	1	358340	+		51923	27808	34760	34773	58606	58606					0.05208355868103354
RTCPVPYWLL	10	Unmodified	_RTCPVPYWLL_					0	0	0			REV__ENSG00000131183|ENST00000324417|SLC34A1	REV__ENSG00000131183|ENST00000324417|SLC34A1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	624.3386840820312	2	624.333901	1246.65325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.042	1	67.169	66.669	67.669	0.12649								0	0	0	0.45132	1	5979	5979		30.318	3.6248	1		+		51924	18938	34761	34774	58607	58607					0.03978924421994634
RTDKYKRLK	9	Unmodified	_RTDKYKRLK_					0	0	0		chr1:165768244-165768759|20|18.9|0.05|8.5|-|1|None,TMCO1|1;ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1	chr1:165768244-165768759|20|18.9|0.05|8.5|-|1|None,TMCO1|1	chr1:165768244-165768759|20|18.9|0.05|8.5|-|1|None,TMCO1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3667602539062	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.7932	1	12410	12410		24.519	3.5723	1	3346600			51925	26	34762	34775	58608	58608					0.12459876308253115
RTDYVVRPST	10	Unmodified	_RTDYVVRPST_					0	0	0		nc|ENSG00000170322|Q6P4R8-3|NFRKB;ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB	nc|ENSG00000170322|Q6P4R8-3|NFRKB	nc|ENSG00000170322|Q6P4R8-3|NFRKB	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.5999755859375	2	597.317294	1192.62004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.902	1	71.902	71.402	72.402	0								0	0	0	0.45132	1	6432	6432		33.922	7.2287	1				51926	6575	34763	34776	58609	58609					0.031430139036501714
RTELSSLPYTT	11	Unmodified	_RTELSSLPYTT_					0	0	0			REV__ENST00000536884.1_1_14:23355236-23355563:+|nuORF	REV__ENST00000536884.1_1_14:23355236-23355563:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.5497741699219	3	423.22247	1266.64558	1.0298	0.00043584	2.6149	0.0011067	3.6447	0.0015425	423.2225939429437	22.53	0.35135	22.111	21.924	22.276	-0.41879					11	7	2	0	0	0	0.17062	1	921	921		22.781	7.4483	1	33076	+		51927	28416	34764	34777	58610	58610					0.022924436354287536
RTFKKCKKIYI	11	Unmodified	_RTFKKCKKIYI_					0	0	0		ENST00000576696.2_1_13:24041102-24041303:+|nuORF;ENST00000575689.4_1_13:24041048-24044692:+|nuORF	ENST00000576696.2_1_13:24041102-24041303:+|nuORF	ENST00000576696.2_1_13:24041102-24041303:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62371826171875	3	476.623364	1426.84826	-1.6911	-0.000806	2.4072	0.0011473	0.71614	0.00034133	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.79945	1	12363	12363		11.455	1.3507	1	2577100			51928	14053	34765	34778	58611	58611					0.1519109522701001
RTGGSAHN	8	Unmodified	_RTGGSAHN_					0	0	0		CON__P15636	CON__P15636	CON__P15636	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.1968688964844	2	400.193908	798.373263	-0.18716	-7.4901E-05	2.8757	0.0011508	2.6886	0.0010759	400.1952819307741	86.353	1.3706	86.421	85.987	87.357	0.067444					79	31	5	0	0	0	0.87064	2	8673	8663;8673		45.952	8.7928	1	2357200		+	51929	593	34766	34779	58612;58613	58613					-0.03398855804584855
RTGGSAHN	8	Unmodified	_RTGGSAHN_					0	0	0		CON__P15636	CON__P15636	CON__P15636	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1964111328125	2	400.193908	798.373263	1.0095	0.00040398	2.1539	0.00086197	3.1633	0.0012659	400.19508038720977	81.709	1.4923	82.135	81.837	83.33	0.42646					93	36	4	0	0	0	0.89494	1	9403	9403		37.159	0	1	32993000		+	51930	593	34766	34779	58614	58614					-0.03398855804584855
RTGGSAHN	8	Unmodified	_RTGGSAHN_					0	0	0		CON__P15636	CON__P15636	CON__P15636	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1965026855469	2	400.193908	798.373263	1.1195	0.00044802	1.6036	0.00064177	2.7232	0.0010898	400.194879000031	85.082	1.7417	85.522	85.026	86.768	0.43967					94	42	4	0	0	0	0.90983	1	9973	9973		42.396	8.8806	1	30482000		+	51931	593	34766	34779	58615	58615					-0.03398855804584855
RTGIRSPGT	9	Unmodified	_RTGIRSPGT_					0	0	0			REV__ENST00000315796.4_1_2:172945995-172946166:+|nuORF	REV__ENST00000315796.4_1_2:172945995-172946166:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7667541503906	2	472.76724	943.519927	0.6034	0.00028527	-0.84746	-0.00040065	-0.24406	-0.00011538	472.7667330259924	81.565	1.9694	81.709	80.825	82.794	0.14352					77	45	2	0	0	0	0.69624	1	7732	7732		40.778	4.3314	1	162340	+		51932	24949	34767	34780	58616	58616					0.045908213605116543
RTGLLVLPLRP	11	Unmodified	_RTGLLVLPLRP_					0	0	0			REV__ENST00000370210.3_2_X:152736080-152736602:-|nuORF	REV__ENST00000370210.3_2_X:152736080-152736602:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7669372558594	3	412.271319	1233.79213	0.27283	0.00011248	4.342	0.0017901	4.6148	0.0019026	412.2730822861877	49.482	1.391	49.524	49.044	50.435	0.04224					74	33	3	0	0	0	0.18034	1	3787	3787		11.932	4.5326	1	102950	+		51933	25643	34768	34781	58617	58617					0.18458210381822937
RTGRFCRDFWR	11	Unmodified	_RTGRFCRDFWR_					0	0	0		ENSG00000179044|ENST00000314586|EXOC3L1	ENSG00000179044|ENST00000314586|EXOC3L1	ENSG00000179044|ENST00000314586|EXOC3L1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.5809326171875	3	500.586083	1498.73642	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.77	1	111.75	111.25	112.25	-0.019882								0	0	0	0.56276	1	11909	11909		8.7993	2.1397	1				51934	7239	34769	34782	58618	58618					0.007000539225600733
RTGTLRYK	8	Unmodified	_RTGTLRYK_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.79205322265625	2	497.793258	993.571963	0.11493	5.7209E-05	-0.38275	-0.00019053	-0.26783	-0.00013332	497.79284591894856	17.564	0.58294	16.953	16.613	17.196	-0.6107					25	13	3	0	0	0	0.89962	1	274	274		38.806	1.647	1	179040	+		51935	23025	34770	34783	58619	58619					0.07491984774276261
RTIAPIIGR	9	Unmodified	_RTIAPIIGR_					0	0	0		ENSG00000096401|ENST00000371477|CDC5L	ENSG00000096401|ENST00000371477|CDC5L	ENSG00000096401|ENST00000371477|CDC5L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8189697265625	2	498.819276	995.623999	0.17031	8.4956E-05	-0.41247	-0.00020575	-0.24216	-0.00012079	498.8189067868914	38.993	0.98392	38.963	38.538	39.522	-0.03027					63	22	4	0	0	0	0.00044528	6	2686	2651;2659;2672;2686;2697;2710		146.79	44.012	1	875250			51936	1740	34771	34784	58620;58621;58622;58623;58624;58625	58623					0.1260114818803686
RTIAPIIGR	9	Unmodified	_RTIAPIIGR_					0	0	0		ENSG00000096401|ENST00000371477|CDC5L	ENSG00000096401|ENST00000371477|CDC5L	ENSG00000096401|ENST00000371477|CDC5L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.8189697265625	2	498.819276	995.623999	-1.105	-0.00055119	0.98849	0.00049308	-0.1165	-5.8115E-05	498.81964627089155	38.847	1.2856	38.8	38.42	39.706	-0.047005					70	29	4	0	0	0	0.014602	5	2735	2721;2735;2746;2759;2771		129.42	21.814	1	968290			51937	1740	34771	34784	58626;58627;58628;58629;58630	58627					0.1260114818803686
RTIAPIIGR	9	Unmodified	_RTIAPIIGR_					0	0	0		ENSG00000096401|ENST00000371477|CDC5L	ENSG00000096401|ENST00000371477|CDC5L	ENSG00000096401|ENST00000371477|CDC5L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.81903076171875	2	498.819276	995.623999	-2.7449	-0.0013692	2.5398	0.0012669	-0.20506	-0.00010229	498.82039912199195	38.8	1.2873	38.811	38.402	39.689	0.011173					65	29	4	0	0	0	0.096326	7	2684	2650;2660;2671;2684;2697;2709;2722		93.143	24.89	1	982290			51938	1740	34771	34784	58631;58632;58633;58634;58635;58636;58637	58634					0.1260114818803686
RTIDIYMLLN	10	Unmodified	_RTIDIYMLLN_					0	0	0		ENSG00000144668|ENST00000264741|ITGA9	ENSG00000144668|ENST00000264741|ITGA9	ENSG00000144668|ENST00000264741|ITGA9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92236328125	3	417.897041	1250.66929	-1.8946	-0.00079173	-0.9146	-0.00038221	-2.8092	-0.0011739	417.8961047570081	105.29	0.31621	105.36	105.18	105.49	0.073112					10	7	2	0	0	0	0.37624	1	11165	11165		41.427	13.345	1	46863			51939	4725	34772	34785	58638	58638					0.0539858586828359
RTIGCLRG	8	Unmodified	_RTIGCLRG_					0	0	0			REV__ENST00000464547.5_1_1:212792437-212792894:+|nuORF	REV__ENST00000464547.5_1_1:212792437-212792894:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.263427734375	2	438.247629	874.480705	-1.9337	-0.00084743	2.8973	0.0012697	0.96363	0.00042231	438.2491703641096	36.447	0.55262	36.447	36.181	36.734	0					15	12	2	0	0	0	0.4196	1	2102	2102		26.693	0	1	35016	+		51940	27095	34773	34786	58639	58639					0.03844397805312383
RTIGLALVSS	10	Unmodified	_RTIGLALVSS_					0	0	0			REV__ENSG00000175283|ENST00000372586|DOLK	REV__ENSG00000175283|ENST00000372586|DOLK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.8076171875	2	508.808574	1015.60259	0.65318	0.00033234	-2.4261	-0.0012344	-1.7729	-0.00090206	508.80731297639136	83.188	1.9706	83.335	82.631	84.602	0.14695					106	45	4	0	0	0	0.86471	1	8093	8093		30.318	2.2362	1	3797600	+		51941	22056	34774	34787	58640	58640					0.09541718368654983
RTIIMEDRLL	10	Unmodified	_RTIIMEDRLL_					0	0	0		ENSG00000172840|ENST00000311765|PDP2	ENSG00000172840|ENST00000311765|PDP2	ENSG00000172840|ENST00000311765|PDP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.5757751464844	3	420.57619	1258.70674	2.2578	0.00094957	-4.2228	-0.001776	-1.9651	-0.00082646	420.57436273463946	46.941	0.83286	46.937	46.593	47.426	-0.0041618					58	20	4	0	0	0	0.86014	1	3849	3849		23.378	2.3457	1	858330			51942	6800	34775	34788	58641	58641					0.08773677133876845
RTIKLQAN	8	Unmodified	_RTIKLQAN_					0	0	0		ENSG00000123908|ENST00000220592|AGO2;nc|ENSG00000123908|Q9UKV8-2|AGO2;ENST00000517293.5_1_8:141582675-141645605:-|nuORF	ENSG00000123908|ENST00000220592|AGO2	ENSG00000123908|ENST00000220592|AGO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28753662109375	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.87064	1	10036	10036		29.15	0	1	48696000			51943	3294	34776	34789	58642	58642					0.08748582399982752
RTINLLEVLPW	11	Unmodified	_RTINLLEVLPW_					0	0	0		ENSG00000179363|ENST00000319560|TMEM31	ENSG00000179363|ENST00000319560|TMEM31	ENSG00000179363|ENST00000319560|TMEM31	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9327087402344	3	451.934484	1352.78162	-1.2099	-0.00054677	-2.7663	-0.0012502	-3.9762	-0.001797	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.71803	1	10484	10484		28.577	8.2617	1	1176100			51944	7266	34777	34790	58643	58643					0.1193418293673858
RTIPKFPAP	9	Unmodified	_RTIPKFPAP_					0	0	0			REV__ENSG00000166902|ENST00000300151|MRPL16	REV__ENSG00000166902|ENST00000300151|MRPL16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8087158203125	2	513.808377	1025.6022	0.14837	7.6233E-05	1.0682	0.00054883	1.2165	0.00062507	513.8088134492856	48.067	1.4161	48.057	47.714	49.13	-0.0093269					122	36	4	0	0	0	0.77696	1	4058	4058		31.53	3.6476	1	1557500	+		51945	21337	34778	34791	58644	58644					0.0904234343945518
RTIPKFPAP	9	Unmodified	_RTIPKFPAP_					0	0	0			REV__ENSG00000166902|ENST00000300151|MRPL16	REV__ENSG00000166902|ENST00000300151|MRPL16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8087158203125	2	513.808377	1025.6022	-0.43911	-0.00022562	1.5531	0.00079801	1.114	0.00057239	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.78058	1	4227	4227		30.504	3.7075	1	1606900	+		51946	21337	34778	34791	58645	58645					0.0904234343945518
RTIPKFPAP	9	Unmodified	_RTIPKFPAP_					0	0	0			REV__ENSG00000166902|ENST00000300151|MRPL16	REV__ENSG00000166902|ENST00000300151|MRPL16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8086547851562	2	513.808377	1025.6022	-0.18035	-9.2668E-05	1.1688	0.00060056	0.98848	0.00050789	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.77696	1	4158	4158		31.53	2.3803	1	1777300	+		51947	21337	34778	34791	58646	58646					0.0904234343945518
RTKAAPVK	8	Unmodified	_RTKAAPVK_					0	0	0			REV__ENSG00000161031|ENST00000340880|PGLYRP2	REV__ENSG00000161031|ENST00000340880|PGLYRP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.9141845703125	2	435.779619	869.544686	-0.41187	-0.00017948	1.0976	0.0004783	0.68571	0.00029882	435.7796912751769	33.132	0.35184	33.077	32.936	33.288	-0.05434					12	9	2	0	0	0	0.4196	1	2003	2003		6.3127	0	1	23907	+		51948	20759	34779	34792	58647	58647					0.10469501233887968
RTKANPEPELK	11	Unmodified	_RTKANPEPELK_					0	0	0			REV__ENST00000583091.1_1_17:28395652-28396225:+|nuORF	REV__ENST00000583091.1_1_17:28395652-28396225:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8598022460938	2	641.859326	1281.7041	-0.047501	-3.0489E-05	-0.23308	-0.00014961	-0.28058	-0.0001801	642.3607489097492	117.62	0.31653	117.55	117.34	117.65	-0.07531					33	10	4	0	0	0	0.69931	1	12627	12627		31.634	2.4642	1	442700	+		51949	29065	34780	34793	58648	58648					0.07451545000526494
RTKGDEEEY	9	Unmodified	_RTKGDEEEY_					0	0	0		nc|ENSG00000151445|Q9H9C1-2|VIPAS39;ENSG00000151445|ENST00000557658|VIPAS39	nc|ENSG00000151445|Q9H9C1-2|VIPAS39	nc|ENSG00000151445|Q9H9C1-2|VIPAS39	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.753662109375	2	563.754192	1125.49383	-1.2767	-0.00071977	1.4852	0.0008373	0.20848	0.00011753	563.7548160979185	35.297	0.63218	35.285	34.976	35.608	-0.012203					34	14	3	0	0	0	0.43338	1	2184	2184		55.504	4.1688	1	216460			51950	5117	34781	34794	58649	58649					-0.06389537392283273
RTKGLTKGN	9	Unmodified	_RTKGLTKGN_					0	0	0			REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|133|1|anti-sense	REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|133|1|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7908020019531	2	487.790715	973.566878	-0.085708	-4.1808E-05	-0.32837	-0.00016018	-0.41408	-0.00020199	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.78983	1	8048	8048		27.882	3.3782	1	514950	+		51951	29650	34782	34795	58650	58650					0.07903680911658739
RTKIKAKLHQM	11	Unmodified	_RTKIKAKLHQM_					0	0	0		ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9431457519531	3	451.943096	1352.80746	-1.2962	-0.0005858	1.3726	0.00062036	0.076468	3.4559E-05	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.75121	1	4280	4280		21.78	3.2494	1	734340			51952	7749	34783	34796	58651	58651					0.1451675390735545
RTKKKKKKKKM	11	Unmodified	_RTKKKKKKKKM_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.9931945800781	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.724	1	74.851	74.351	75.351	0.12711								0	0	0	0.56276	1	6919	6919		5.4129	3.8899	1				51953	10555	34784	34797	58652	58652					0.2613015465492481
RTKKKKKKKKM	11	Unmodified	_RTKKKKKKKKM_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	477.991943359375	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.755	1	73.886	73.386	74.386	0.13126								0	0	0	0.56276	1	6796	6796		0.37141	0.03091	1				51954	10555	34784	34797	58653	58653					0.2613015465492481
RTKKKKKKKKM	11	Unmodified	_RTKKKKKKKKM_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	477.99151611328125	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.087	1	75.219	74.719	75.719	0.13208								0	0	0	0.56276	1	6972	6972		6.001	0.85868	1				51955	10555	34784	34797	58654	58654					0.2613015465492481
RTKKKKKKKKM	11	Unmodified	_RTKKKKKKKKM_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.9921875	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.914	1	74	73.5	74.5	0.085907								0	0	0	0.56276	1	6789	6789		3.2113	2.8708	1				51956	10555	34784	34797	58655	58655					0.2613015465492481
RTKKKKKKKKM	11	Unmodified	_RTKKKKKKKKM_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.9918212890625	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.823	1	74.909	74.409	75.409	0.085907								0	0	0	0.56276	1	6904	6904		3.2113	1.7926	1				51957	10555	34784	34797	58656	58656					0.2613015465492481
RTKKKKKKKKM	11	Unmodified	_RTKKKKKKKKM_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.9923095703125	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.095	1	73.483	72.983	73.983	0.38779								0	0	0	0.56276	1	8189	8189		3.4087	0.38274	1				51958	10555	34784	34797	58657	58657					0.2613015465492481
RTKKKKKKKKM	11	Unmodified	_RTKKKKKKKKM_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.9921875	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.851	1	72.401	71.901	72.901	0.55008								0	0	0	0.56276	1	8043	8043		3.026	0.49197	1				51959	10555	34784	34797	58658	58658					0.2613015465492481
RTKKKKKKKKM	11	Unmodified	_RTKKKKKKKKM_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.99261474609375	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.236	1	72.786	72.286	73.286	0.55008								0	0	0	0.56276	1	8099	8099		5.4129	0.27055	1				51960	10555	34784	34797	58659	58659					0.2613015465492481
RTKKKKKKKKM	11	Unmodified	_RTKKKKKKKKM_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.9927062988281	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.395	1	72.946	72.446	73.446	0.55008								0	0	0	0.56276	1	8122	8122		8.7993	5.588	1				51961	10555	34784	34797	58660	58660					0.2613015465492481
RTKKKKKKKKM	11	Unmodified	_RTKKKKKKKKM_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.9925537109375	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.527	1	73.08	72.58	73.58	0.55322								0	0	0	0.56276	1	8141	8141		0.37141	0.059155	1				51962	10555	34784	34797	58661	58661					0.2613015465492481
RTKKVGIVGK	10	Unmodified	_RTKKVGIVGK_					0	0	0		ENST00000487233.1_1_2:217363570-217364184:+|nuORF;ENST00000490649.1_1_2:217363570-217364755:+|nuORF;ENSG00000197756|ENST00000491306|RPL37A;ENST00000478153.1_1_2:217363923-217364755:+|nuORF	ENST00000487233.1_1_2:217363570-217364184:+|nuORF	ENST00000487233.1_1_2:217363570-217364184:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.361328125	2	543.361308	1084.70806	0.017512	9.5154E-06	-0.068067	-3.6985E-05	-0.050555	-2.747E-05	543.3611508149596	17.785	0.53657	17.302	17.115	17.652	-0.48256					23	11	4	0	0	0	0.27582	1	311	311		75.043	16.261	1	548200			51963	8195	34785	34798	58662	58662					0.1690967928493592
RTKKVGIVGK	10	Unmodified	_RTKKVGIVGK_					0	0	0		ENST00000487233.1_1_2:217363570-217364184:+|nuORF;ENST00000490649.1_1_2:217363570-217364755:+|nuORF;ENSG00000197756|ENST00000491306|RPL37A;ENST00000478153.1_1_2:217363923-217364755:+|nuORF	ENST00000487233.1_1_2:217363570-217364184:+|nuORF	ENST00000487233.1_1_2:217363570-217364184:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.3618774414062	2	543.361308	1084.70806	-0.058516	-3.1795E-05	0.073329	3.9844E-05	0.014813	8.049E-06	543.361279241239	17.953	0.52948	17.332	17.147	17.676	-0.62141					25	12	3	0	0	0	0.4503	2	320	320;329		59.931	2.0862	1	649990			51964	8195	34785	34798	58663;58664	58663					0.1690967928493592
RTKRPLAPPTG	11	Unmodified	_RTKRPLAPPTG_					0	0	0			REV__nc|ENSG00000073803|O43283-5|MAP3K13	REV__nc|ENSG00000073803|O43283-5|MAP3K13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.3585205078125	2	597.359296	1192.70404	-0.56757	-0.00033904	-1.0155	-0.00060663	-1.5831	-0.00094568	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.732	1	10694	10694		26.063	1.8606	1	3951300	+		51965	16682	34786	34799	58665	58665					0.11539589791209437
RTKRPLAPPTG	11	Unmodified	_RTKRPLAPPTG_					0	0	0			REV__nc|ENSG00000073803|O43283-5|MAP3K13	REV__nc|ENSG00000073803|O43283-5|MAP3K13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.3583984375	2	597.359296	1192.70404	-0.45682	-0.00027289	-1.281	-0.00076525	-1.7379	-0.0010381	597.3582006630761	100.19	3.2446	100.23	98.977	102.22	0.046349					174	76	4	0	0	0	0.732	1	10793	10793		26.063	0.48933	1	4145900	+		51966	16682	34786	34799	58666	58666					0.11539589791209437
RTKRPLAPPTG	11	Unmodified	_RTKRPLAPPTG_					0	0	0			REV__nc|ENSG00000073803|O43283-5|MAP3K13	REV__nc|ENSG00000073803|O43283-5|MAP3K13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.359130859375	2	597.359296	1192.70404	0.89294	0.00053341	-2.814	-0.001681	-1.921	-0.0011475	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.72739	1	10460	10460		27.047	5.3616	1	2674200	+		51967	16682	34786	34799	58667	58667					0.11539589791209437
RTKVRLCR	8	Unmodified	_RTKVRLCR_					0	0	0			REV__nc|ENSG00000226746|Q8TEV8|SMCR5	REV__nc|ENSG00000226746|Q8TEV8|SMCR5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3137817382812	2	516.316377	1030.6182	-1.5619	-0.00080641	-2.9846	-0.001541	-4.5464	-0.0023474	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.88185	1	12128	12128		32.812	1.2826	1	4038100	+		51968	30211	34787	34800	58668	58668					0.10411726404709043
RTKWRKIFKWR	11	Unmodified	_RTKWRKIFKWR_					0	0	0			REV__nc|ENSG00000197415|Q14D04-2|VEPH1	REV__nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.1646118164062	3	535.6598	1603.95757	3.4825	0.0018654	-3.4977	-0.0018736	-0.015188	-8.1358E-06	535.6579746846174	117.73	0.71512	117.71	117.23	117.94	-0.02433					29	24	2	0	0	0	0.18362	1	12993	12993		8.0344	4.6256	1	115450	+		51969	23228	34788	34801	58669	58669					0.17974861961306488
RTLAHLAVRN	10	Unmodified	_RTLAHLAVRN_					0	0	0			REV__ENSG00000090971|ENST00000205194|NAT14	REV__ENSG00000090971|ENST00000205194|NAT14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8428344726562	2	575.843813	1149.67307	-0.46596	-0.00026832	-0.81024	-0.00046657	-1.2762	-0.00073489	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.86471	1	9253	9253		30.318	1.1682	1	3411000	+		51970	17000	34789	34802	58670	58670					0.10422436476960684
RTLAHLAVRN	10	Unmodified	_RTLAHLAVRN_					0	0	0			REV__ENSG00000090971|ENST00000205194|NAT14	REV__ENSG00000090971|ENST00000205194|NAT14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8429565429688	2	575.843813	1149.67307	1.9391	0.0011166	-3.5988	-0.0020723	-1.6596	-0.00095569	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.8545	1	9834	9834		36.447	4.4919	1	5986700	+		51971	17000	34789	34802	58671	58671					0.10422436476960684
RTLAHLAVRN	10	Unmodified	_RTLAHLAVRN_					0	0	0			REV__ENSG00000090971|ENST00000205194|NAT14	REV__ENSG00000090971|ENST00000205194|NAT14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8424682617188	2	575.843813	1149.67307	0.91732	0.00052823	-2.5477	-0.0014671	-1.6304	-0.00093886	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.70553	4	9786	9524;9689;9786;9798		44.377	2.4771	1	5468500	+		51972	17000	34789	34802	58672;58673;58674;58675	58674					0.10422436476960684
RTLALPLVLP	10	Unmodified	_RTLALPLVLP_					0	0	0		ENST00000368020.5_1_1:161009295-161009403:-|nuORF	ENST00000368020.5_1_1:161009295-161009403:-|nuORF	ENST00000368020.5_1_1:161009295-161009403:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.84033203125	2	546.860609	1091.70667	0.19477	0.00010651	1.0308	0.00056369	1.2255	0.0006702	546.8610617098583	100.61	0.21103	100.83	100.64	100.85	0.21511					8	4	2	0	0	0	0.37624	1	10501	10501		29.15	7.1897	1	74339			51973	10577	34790	34803	58676	58676					0.16448045196170824
RTLALPLVLP	10	Unmodified	_RTLALPLVLP_					0	0	0		ENST00000368020.5_1_1:161009295-161009403:-|nuORF	ENST00000368020.5_1_1:161009295-161009403:-|nuORF	ENST00000368020.5_1_1:161009295-161009403:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8400268554688	2	546.860609	1091.70667	0.8486	0.00046407	-3.6289	-0.0019845	-2.7803	-0.0015205	546.8583791862405	100.93	0.82998	101.07	100.85	101.68	0.14352					30	20	3	0	0	0	0.37624	1	10554	10554		37.159	8.0096	1	195380			51974	10577	34790	34803	58677	58677					0.16448045196170824
RTLALRALLLL	11	Unmodified	_RTLALRALLLL_					0	0	0		ENSG00000100726|ENST00000262319|TELO2;ENST00000568240.1_1_16:1556929-1559934:+|nuORF	ENSG00000100726|ENST00000262319|TELO2	ENSG00000100726|ENST00000262319|TELO2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.9224853515625	3	418.286969	1251.83908	-1.7695	-0.00074018	4.2784	0.0017896	2.5088	0.0010494	418.2892919496054	105.44	0.14983	105.6	105.47	105.62	0.15924					5	3	2	0	0	0	0.17996	1	11227	11227		12.433	0	1	60216			51975	1863	34791	34804	58678	58678					0.22323069932986073
RTLAPGLFFSL	11	Unmodified	_RTLAPGLFFSL_					0	0	0		ENSG00000109016|ENST00000395511|DHRS7B	ENSG00000109016|ENST00000395511|DHRS7B	ENSG00000109016|ENST00000395511|DHRS7B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3543701171875	2	611.353148	1220.69174	1.1383	0.00069592	3.4353	0.0021002	4.5737	0.0027961	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.60058	1	9515	9515		44.377	3.599	1	7316900			51976	2444	34792	34805	58679	58679					0.09022553328190952
RTLAVRDL	8	Unmodified	_RTLAVRDL_					0	0	0			REV__ENSG00000102870|ENST00000262525|ZNF629	REV__ENSG00000102870|ENST00000262525|ZNF629	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2874755859375	2	472.287808	942.561064	-0.91361	-0.00043149	1.3293	0.00062781	0.41567	0.00019632	472.2883987984471	99.414	1.6316	99.414	99.097	100.73	0					84	38	3	0	0	0	0.8347	1	10051	10051		23.042	1.0826	1	360760	+		51977	17364	34793	34806	58680	58680					0.08748582399982752
RTLEKVGDRR	10	Unmodified	_RTLEKVGDRR_					0	0	0		ENSG00000198911|ENST00000361204|SREBF2	ENSG00000198911|ENST00000361204|SREBF2	ENSG00000198911|ENST00000361204|SREBF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	615.3575439453125	2	615.357285	1228.70002	3.0577	0.0018815	-2.8693	-0.0017657	0.18832	0.00011588	615.3555264925384	104.67	2.1648	104.63	104.19	106.35	-0.04039					150	51	4	0	0	0	0.86718	1	11542	11542		27.882	2.3082	1	2045600			51978	8366	34794	34807	58681	58681					0.0948150029748831
RTLELLGSFLM	11	Unmodified	_RTLELLGSFLM_					0	0	0			REV__nc|ENSG00000138193|Q9P212-2|PLCE1	REV__nc|ENSG00000138193|Q9P212-2|PLCE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3602294921875	2	640.357573	1278.70059	-0.024279	-1.5547E-05	2.2238	0.001424	2.1995	0.0014085	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.66929	1	10196	10196		36.447	4.8125	1	448130	+		51979	19450	34795	34808	58682	58682					0.07239158902348208
RTLFLTKID	9	Unmodified	_RTLFLTKID_					0	0	0			REV__ENST00000606584.5_1_13:79980478-79992024:+|nuORF	REV__ENST00000606584.5_1_13:79980478-79992024:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8296508789062	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.71772	1	9024	9024		39.253	0	1	1489800	+		51980	29371	34796	34809	58683	58683					0.10094577919790026
RTLFLTKID	9	Unmodified	_RTLFLTKID_					0	0	0			REV__ENST00000606584.5_1_13:79980478-79992024:+|nuORF	REV__ENST00000606584.5_1_13:79980478-79992024:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8299560546875	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.7932	1	8705	8705		26.693	0	1	2008100	+		51981	29371	34796	34809	58684	58684					0.10094577919790026
RTLFRGRRR	9	Unmodified	_RTLFRGRRR_					0	0	0		nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-5|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4	nc|ENSG00000161813|Q71RC2-2|LARP4	nc|ENSG00000161813|Q71RC2-2|LARP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.5872802734375	3	406.586523	1216.73774	0.5758	0.00023411	2.2333	0.00090804	2.8091	0.0011422	406.5873508642622	24.247	1.5285	24.302	23.869	25.398	0.055485					100	43	4	0	0	0	0.78528	1	902	902		29.17	5.7921	1	404210			51982	5657	34797	34810	58685	58685					0.1380405607362718
RTLFVTERR	9	Unmodified	_RTLFVTERR_					0	0	0		ENST00000416579.5_1_2:73200539-73298852:-|nuORF;ENSG00000144040|ENST00000272433|SFXN5;ENST00000474528.5_1_2:73172153-73286292:-|nuORF;ENST00000485057.5_1_2:73247283-73302735:-|nuORF;ENST00000461352.5_1_2:73172212-73286292:-|nuORF	ENST00000416579.5_1_2:73200539-73298852:-|nuORF	ENST00000416579.5_1_2:73200539-73298852:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3436279296875	2	589.343646	1176.67274	0.83312	0.00049099	-2.1148	-0.0012464	-1.2817	-0.00075536	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.7932	1	9886	9886		24.519	0.99649	1	20363000			51983	4684	34798	34811	58686	58686					0.09147016757128767
RTLFVTERR	9	Unmodified	_RTLFVTERR_					0	0	0		ENST00000416579.5_1_2:73200539-73298852:-|nuORF;ENSG00000144040|ENST00000272433|SFXN5;ENST00000474528.5_1_2:73172153-73286292:-|nuORF;ENST00000485057.5_1_2:73247283-73302735:-|nuORF;ENST00000461352.5_1_2:73172212-73286292:-|nuORF	ENST00000416579.5_1_2:73200539-73298852:-|nuORF	ENST00000416579.5_1_2:73200539-73298852:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3436279296875	2	589.343646	1176.67274	-0.63668	-0.00037522	-0.11858	-6.9885E-05	-0.75526	-0.00044511	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.7932	1	10960	10960		24.519	0	1	2236100			51984	4684	34798	34811	58687	58687					0.09147016757128767
RTLGGKMA	8	Unmodified	_RTLGGKMA_					0	0	0		ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.23968505859375	2	417.23673	832.458907	3.0856	0.0012874	3.1331	0.0013073	6.2187	0.0025947	417.2376917787685	88.314	2.8848	88.365	87.296	90.181	0.050415					161	67	3	0	0	0	0.80706	1	9092	9092		19.36	0	1	1607200			51985	14449	34799	34812	58688	58688					0.035975930567246905
RTLGIRNLRV	10	Unmodified	_RTLGIRNLRV_					0	0	0		ENST00000534928.5_1_9:37126450-37126552:+|nuORF	ENST00000534928.5_1_9:37126450-37126552:+|nuORF	ENST00000534928.5_1_9:37126450-37126552:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.3798828125	2	599.380563	1196.74657	3.2712	0.0019607	-4.2058	-0.0025209	-0.93465	-0.00056021	599.3778849492661	103.51	3.7036	103.46	103.04	106.74	-0.043755					239	88	5	0	0	0	0.86348	1	11385	11385		31.53	2.3598	1	11967000			51986	13417	34800	34813	58689	58689					0.15606984919440947
RTLGTPRLS	9	Unmodified	_RTLGTPRLS_					0	0	0			REV__ENST00000528718.5_1_8:145550448-145550541:-|nuORF	REV__ENST00000528718.5_1_8:145550448-145550541:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.79803466796875	2	500.79854	999.582528	-0.065162	-3.2633E-05	-1.6975	-0.00085009	-1.7626	-0.00088273	500.79757326318753	94.542	1.5024	94.611	94.008	95.511	0.068344					48	35	2	0	0	0	0.7932	1	9847	9847		25.574	3.8717	1	553460	+		51987	28253	34801	34814	58690	58690					0.08271967428709104
RTLHLRNVP	9	Unmodified	_RTLHLRNVP_					0	0	0		ENST00000418871.5_1_19:53594936-53606630:-|nuORF	ENST00000418871.5_1_19:53594936-53606630:-|nuORF	ENST00000418871.5_1_19:53594936-53606630:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3323974609375	2	553.333082	1104.65161	1.2853	0.00071117	-2.555	-0.0014138	-1.2698	-0.00070261	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.78983	2	10288	10254;10288		27.882	3.6142	1	4524400			51988	11431	34802	34815	58691;58692	58692					0.10347051448275124
RTLHLRNVP	9	Unmodified	_RTLHLRNVP_					0	0	0		ENST00000418871.5_1_19:53594936-53606630:-|nuORF	ENST00000418871.5_1_19:53594936-53606630:-|nuORF	ENST00000418871.5_1_19:53594936-53606630:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.3330688476562	2	553.333082	1104.65161	0.80706	0.00044658	-1.9527	-0.0010805	-1.1457	-0.00063393	553.3318451739801	96.663	1.8533	97.067	96.582	98.436	0.40451					128	44	4	0	0	0	0.78983	1	11659	11659		27.882	0	1	3116400			51989	11431	34802	34815	58693	58693					0.10347051448275124
RTLIREHGLL	10	Unmodified	_RTLIREHGLL_					0	0	0			REV__nc|ENSG00000198556|Q5FWF6-2|ZNF789	REV__nc|ENSG00000198556|Q5FWF6-2|ZNF789	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3672485351562	2	604.367121	1206.71969	3.6458	0.0022034	-4.4074	-0.0026637	-0.76167	-0.00046033	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.8651	1	12891	12891		25.574	3.6142	1	5883900	+		51990	23339	34803	34816	58694	58694					0.12459876308275852
RTLITTVSFV	10	Unmodified	_RTLITTVSFV_					0	0	0			REV__ENST00000607797.5_1_5:92889566-92899133:-|nuORF	REV__ENST00000607797.5_1_5:92889566-92899133:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8533935546875	2	568.837331	1135.66011	-1.1694	-0.00066523	-0.48127	-0.00027376	-1.6507	-0.00093899	568.8373811747597	102.68	0.3764	102.69	102.59	102.96	0.0082016					11	8	2	0	0	0	0.37624	1	11035	11035		47.657	14.845	1	119380	+		51991	29391	34804	34817	58695	58695					0.09770560574224874
RTLKGHTD	8	Unmodified	_RTLKGHTD_					0	0	0		ENST00000609078.1_1_17:2569342-2573633:+|nuORF;ENSG00000007168|ENST00000397195|PAFAH1B1	ENST00000609078.1_1_17:2569342-2573633:+|nuORF	ENST00000609078.1_1_17:2569342-2573633:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25408935546875	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.77771	1	7906	7906		64.207	11.271	1	946850			51992	719	34805	34818	58696	58696					0.027191324691784757
RTLKKLDSRT	10	Unmodified	_RTLKKLDSRT_					0	0	0			REV__chr15:76935722-76943770|15|37.67|0.47|6.31|+|1|RCN2,None|1	REV__chr15:76935722-76943770|15|37.67|0.47|6.31|+|1|RCN2,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2493591308594	3	406.582333	1216.72517	3.1806	0.0012932	0.751	0.00030534	3.9316	0.0015985	406.5823777958884	112.82	1.2516	112.85	112.71	113.96	0.028854					79	33	3	0	0	0	0.86409	1	12353	12353		25.126	2.5463	1	2434900	+		51993	15623	34806	34819	58697	58697					0.1254755510008181
RTLKRLGMD	9	Unmodified	_RTLKRLGMD_					0	0	0		ENSG00000090382|ENST00000261267|LYZ	ENSG00000090382|ENST00000261267|LYZ	ENSG00000090382|ENST00000261267|LYZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.319091796875	2	545.3135	1088.61245	1.9901	0.0010853	3.8799	0.0021158	5.87	0.003201	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.77696	1	9026	9026		31.53	1.0262	1	4704900			51994	1644	34807	34820	58698	58698					0.07168583102406956
RTLKRNGISPP	11	Unmodified	_RTLKRNGISPP_					0	0	0		ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8690185546875	2	619.870028	1237.7255	2.0624	0.0012784	-3.3055	-0.002049	-1.2431	-0.00077056	619.8678492982955	94.196	2.767	94.137	92.294	95.061	-0.059212					208	65	4	0	0	0	0.66009	1	9997	9997		37.508	1.0614	1	2061200			51995	11572	34808	34821	58699	58699					0.11614974819940471
RTLKRNGISPP	11	Unmodified	_RTLKRNGISPP_					0	0	0		ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8690185546875	2	619.870028	1237.7255	0.62246	0.00038584	-1.8404	-0.0011408	-1.2179	-0.00075497	619.8687823008486	94.059	2.9324	94.104	92.154	95.087	0.045448					223	69	4	0	0	0	0.638	2	9860	9860;9884		40.058	5.8856	1	2371600			51996	11572	34808	34821	58700;58701	58700					0.11614974819940471
RTLKRNGISPP	11	Unmodified	_RTLKRNGISPP_					0	0	0		ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8692016601562	2	619.870028	1237.7255	0.85836	0.00053207	-2.0146	-0.0012488	-1.1562	-0.00071672	619.8686410709195	93.975	2.8634	94.136	92.286	95.15	0.16119					249	68	4	0	0	0	0.67778	1	9688	9688		35.152	8.4591	1	2724800			51997	11572	34808	34821	58702	58702					0.11614974819940471
RTLKRNGISPP	11	Unmodified	_RTLKRNGISPP_					0	0	0		ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	620.367431640625	2	619.870028	1237.7255	1.6172	0.0010025	-2.8457	-0.001764	-1.2285	-0.00076151	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.68532	1	11207	11207		33.922	6.8743	1	1541100			51998	11572	34808	34821	58703	58703					0.11614974819940471
RTLKRNGISPP	11	Unmodified	_RTLKRNGISPP_					0	0	0		ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8695678710938	2	619.870028	1237.7255	1.7162	0.0010638	-2.4227	-0.0015017	-0.70652	-0.00043795	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.48313	1	11507	11507		53.089	7.137	1	4719500			51999	11572	34808	34821	58704	58704					0.11614974819940471
RTLKRNGISPP	11	Unmodified	_RTLKRNGISPP_					0	0	0		ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	ENST00000427391.1_1_X:130964423-130964573:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.86962890625	2	619.870028	1237.7255	1.2588	0.00078029	-1.8553	-0.0011501	-0.59653	-0.00036977	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.66009	2	11528	11455;11528		37.508	7.1765	1	4742500			52000	11572	34808	34821	58705;58706	58706					0.11614974819940471
RTLKTTQLLFT	11	Unmodified	_RTLKTTQLLFT_					0	0	0			REV__nc|ENSG00000149480|O94776-2|MTA2	REV__nc|ENSG00000149480|O94776-2|MTA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.2648620605469	3	441.266122	1320.77654	-0.58771	-0.00025934	4.4161	0.0019487	3.8284	0.0016893	441.26789780064684	53.777	1.8875	53.715	52.661	54.548	-0.062061					99	51	3	0	0	0	0.75779	1	4449	4449		20.315	0.68808	1	214890	+		52001	20171	34809	34822	58707	58707					0.1289787907412574
RTLLAKNN	8	Unmodified	_RTLLAKNN_					0	0	0		ENSG00000163428|ENST00000295628|LRRC58	ENSG00000163428|ENST00000295628|LRRC58	ENSG00000163428|ENST00000295628|LRRC58	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.2796630859375	2	465.279983	928.545414	-1.0328	-0.00048052	1.0243	0.00047658	-0.0084775	-3.9444E-06	465.28033562391573	88.755	1.4343	88.962	88.47	89.905	0.20731					94	33	4	0	0	0	0.86677	1	8851	8851		27.882	3.3782	1	1094400			52002	5796	34810	34823	58708	58708					0.07828295882939074
RTLLARVLNVN	11	Unmodified	_RTLLARVLNVN_					0	0	0			REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8926391601562	2	634.893503	1267.77245	-0.0069402	-4.4063E-06	-1.6425	-0.0010428	-1.6494	-0.0010472	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.51007	1	11017	11017		51.193	8.7966	1	31286000	+		52003	18732	34811	34824	58709	58709					0.14927834371087556
RTLLFTLLL	9	Unmodified	_RTLLFTLLL_					0	0	0			REV__nc|ENSG00000262628|P47884|OR1D4	REV__nc|ENSG00000262628|P47884|OR1D4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.316650390625	2	545.35516	1088.69577	0.15351	8.3715E-05	4.4601	0.0024323	4.6136	0.002516	545.357176326864	90.13	0.2105	90.343	90.211	90.422	0.21272					6	4	2	0	0	0	0.20789	1	9022	9022		27.882	17.017	1	67255	+		52004	23948	34812	34825	58710	58710					0.1549664282190406
RTLLHHAVSTG	11	Unmodified	_RTLLHHAVSTG_					0	0	0		nc|ENSG00000149091|Q13574-6|DGKZ;ENSG00000149091|ENST00000456247|DGKZ;nc|ENSG00000149091|Q13574-4|DGKZ;nc|ENSG00000149091|Q13574-7|DGKZ;nc|ENSG00000149091|Q13574-5|DGKZ;nc|ENSG00000149091|Q13574-3|DGKZ;nc|ENSG00000149091|Q13574-1|DGKZ;ENST00000528173.5_1_11:46400309-46400787:+|nuORF;ENST00000534802.1_1_11:46400234-46401494:+|nuORF	nc|ENSG00000149091|Q13574-6|DGKZ	nc|ENSG00000149091|Q13574-6|DGKZ	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3328247070312	2	596.333279	1190.652	-0.30561	-0.00018224	-0.32296	-0.00019259	-0.62857	-0.00037483	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.72739	1	9660	9660		27.047	1.4733	1	740920			52005	4995	34813	34826	58711	58711					0.06430426377460208
RTLLHWTARR	10	Unmodified	_RTLLHWTARR_					0	0	0		ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.25738525390625	3	437.258184	1308.75272	-0.16089	-7.0349E-05	-1.7878	-0.00078172	-1.9487	-0.00085207	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.86582	1	10600	10600		25.892	1.6599	1	727380			52006	5338	34814	34827	58712	58712					0.11069503150952187
RTLLRPSD	8	Unmodified	_RTLLRPSD_					0	0	0		nc|ENSG00000163576|Q8N7U6-3|EFHB;ENSG00000163576|ENST00000295824|EFHB	nc|ENSG00000163576|Q8N7U6-3|EFHB	nc|ENSG00000163576|Q8N7U6-3|EFHB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2773132324219	2	479.277441	956.540328	-0.098244	-4.7086E-05	0.019792	9.4859E-06	-0.078452	-3.76E-05	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.86677	1	8487	8487		27.882	2.3082	1	6799600			52007	5829	34815	34828	58713	58713					0.06031992020314192
RTLLRPSD	8	Unmodified	_RTLLRPSD_					0	0	0		nc|ENSG00000163576|Q8N7U6-3|EFHB;ENSG00000163576|ENST00000295824|EFHB	nc|ENSG00000163576|Q8N7U6-3|EFHB	nc|ENSG00000163576|Q8N7U6-3|EFHB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2774353027344	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.89043	1	8142	8142		35.618	7.364	1	2046100			52008	5829	34815	34828	58714	58714					0.06031992020314192
RTLLRPSD	8	Unmodified	_RTLLRPSD_					0	0	0		nc|ENSG00000163576|Q8N7U6-3|EFHB;ENSG00000163576|ENST00000295824|EFHB	nc|ENSG00000163576|Q8N7U6-3|EFHB	nc|ENSG00000163576|Q8N7U6-3|EFHB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27740478515625	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.89043	1	8186	8186		35.618	2.1027	1	6593200			52009	5829	34815	34828	58715	58715					0.06031992020314192
RTLNIRTVC	9	Unmodified	_RTLNIRTVC_					0	0	0		ENST00000378535.4_1_12:88890181-88890376:-|nuORF	ENST00000378535.4_1_12:88890181-88890376:-|nuORF	ENST00000378535.4_1_12:88890181-88890376:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3267211914062	2	538.305675	1074.5968	1.2457	0.00067059	3.856	0.0020757	5.1018	0.0027463	538.3072954466802	100.95	0.12045	101	100.94	101.06	0.046356					6	2	3	0	0	0	0.20789	1	10870	10870		47.657	24.135	1	498710			52010	10867	34816	34829	58716	58716					0.0624829658534054
RTLNKSLSI	9	Unmodified	_RTLNKSLSI_					0	0	0			REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.314023	1030.61349	-0.68072	-0.00035146	0.32195	0.00016623	-0.35876	-0.00018524	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.77696	1	10042	10042		31.53	1.0262	1	39641000	+		52011	24242	34817	34830	58717	58717					0.0994112074295117
RTLNKSLSI	9	Unmodified	_RTLNKSLSI_					0	0	0			REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3140258789062	2	516.314023	1030.61349	-0.047196	-2.4368E-05	-0.36182	-0.00018681	-0.40901	-0.00021118	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.77696	1	10545	10545		31.53	1.0262	1	63062000	+		52012	24242	34817	34830	58718	58718					0.0994112074295117
RTLNKSLSI	9	Unmodified	_RTLNKSLSI_					0	0	0			REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3136596679688	2	516.314023	1030.61349	2.7793	0.001435	-3.2178	-0.0016614	-0.43843	-0.00022637	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.75725	1	10695	10695		36.447	3.6343	1	67991000	+		52013	24242	34817	34830	58719	58719					0.0994112074295117
RTLNKSLSI	9	Unmodified	_RTLNKSLSI_					0	0	0			REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3137817382812	2	516.314023	1030.61349	0.876	0.00045229	-1.3141	-0.00067851	-0.43813	-0.00022621	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.75725	4	10612	10564;10612;10708;10854		36.447	4.9169	1	67025000	+		52014	24242	34817	34830	58720;58721;58722;58723	58721					0.0994112074295117
RTLNKSLSI	9	Unmodified	_RTLNKSLSI_					0	0	0			REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.31396484375	2	516.314023	1030.61349	-0.25799	-0.00013321	-0.28251	-0.00014586	-0.5405	-0.00027907	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.75725	3	10360	10252;10360;10442		36.447	2.3803	1	82226000	+		52015	24242	34817	34830	58724;58725;58726	58725					0.0994112074295117
RTLNKSLSI	9	Unmodified	_RTLNKSLSI_					0	0	0			REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.31396484375	2	516.314023	1030.61349	0.80555	0.00041592	-1.2336	-0.00063695	-0.42809	-0.00022103	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.75725	2	10279	10279;10483		36.447	5.9431	1	72906000	+		52016	24242	34817	34830	58727;58728	58727					0.0994112074295117
RTLNKSLSI	9	Unmodified	_RTLNKSLSI_					0	0	0			REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.313720703125	2	516.314023	1030.61349	-1.5618	-0.0008064	1.1232	0.00057995	-0.4386	-0.00022645	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.75725	4	10285	10201;10213;10285;10344		36.447	5.9431	1	66055000	+		52017	24242	34817	34830	58729;58730;58731;58732	58731					0.0994112074295117
RTLNKSLSI	9	Unmodified	_RTLNKSLSI_					0	0	0			REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3137817382812	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12824	12824		23.523	1.5628	1	4038100	+		52018	24242	34817	34830	58733	58733					0.0994112074295117
RTLNKSLSI	9	Unmodified	_RTLNKSLSI_					0	0	0			REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	REV__ENST00000244040.3_1_20:56937129-56937339:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3139038085938	2	516.314023	1030.61349	1.9037	0.0009829	-1.9331	-0.0009981	-0.029436	-1.5198E-05	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.78528	1	11873	11873		29.17	1.0886	1	22616000	+		52019	24242	34817	34830	58734	58734					0.0994112074295117
RTLPVTWKVF	10	Unmodified	_RTLPVTWKVF_					0	0	0		ENST00000587384.5_3_19:34850692-34855755:+|nuORF	ENST00000587384.5_3_19:34850692-34855755:+|nuORF	ENST00000587384.5_3_19:34850692-34855755:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.8707275390625	2	623.868966	1245.72338	0.9237	0.00057627	1.3225	0.00082505	2.2462	0.0014013	623.8696844669474	104.46	2.0179	104.58	104.11	106.13	0.11684					143	50	4	0	0	0	0.8608	1	11084	11084		34.173	7.4796	1	2763900			52020	14189	34818	34831	58735	58735					0.11034546082123597
RTLQERRRMKR	11	Unmodified	_RTLQERRRMKR_					0	0	0		ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.305419921875	3	510.635437	1528.88448	-0.66076	-0.00033741	0.9083	0.00046381	0.24754	0.0001264	510.63450150479764	105.06	2.1188	105.06	104.28	106.4	0					172	50	6	0	0	0	0.79945	1	10852	10852		11.455	1.8085	1	638450			52021	9360	34819	34832	58736	58736					0.14119365176406973
RTLQERRRMKR	11	Unmodified	_RTLQERRRMKR_					0	0	0		ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.6336669921875	3	510.635437	1528.88448	3.0226	0.0015435	-1.7658	-0.00090166	1.2569	0.00064181	511.30406869875213	104.93	2.0384	104.88	103.97	106.01	-0.04039					199	48	6	0	0	0	0.88916	1	11460	11460		3.4087	0	1	643280			52022	9360	34819	34832	58737	58737					0.14119365176406973
RTLQKLKRAK	10	Unmodified	_RTLQKLKRAK_					0	0	0		ENSG00000115942|ENST00000234296|ORC2	ENSG00000115942|ENST00000234296|ORC2	ENSG00000115942|ENST00000234296|ORC2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3923950195312	2	621.411863	1240.80917	0.92096	0.00057229	-2.0413	-0.0012685	-1.1203	-0.00069619	621.410468503437	104.64	0.11742	104.75	104.67	104.79	0.11684					4	2	2	0	0	0	0.37624	1	11117	11117		27.882	8.7787	1	62326			52023	2884	34820	34833	58738	58738					0.1984013098763171
RTLQSIVEKVH	11	Unmodified	_RTLQSIVEKVH_					0	0	0			REV__ENSG00000242950|ENST00000603053|ERVW-1	REV__ENSG00000242950|ENST00000603053|ERVW-1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.25738525390625	3	437.257738	1308.75138	1.9496	0.00085247	-2.6885	-0.0011755	-0.73887	-0.00032308	437.25651996050084	98.928	2.561	99.291	98.354	100.91	0.36292					151	63	3	0	0	0	0.61907	1	11985	11985		42.243	7.0906	1	662950	+		52024	23836	34821	34834	58739	58739					0.10935824271541605
RTLQVLLPDL	10	Unmodified	_RTLQVLLPDL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.3567504882812	2	584.358431	1166.70231	-0.79353	-0.00046371	-3.4252	-0.0020015	-4.2187	-0.0024653	584.356586051485	92.738	2.8775	92.808	91.472	94.349	0.06987					192	67	3	0	0	0	0.86698	1	9613	9613		28.081	2.5074	1	594900			52025	6985	34822	34835	58740	58740					0.1256253598260173
RTLRQRSRRPK	11	Unmodified	_RTLRQRSRRPK_					0	0	0		ENSG00000196421|ENST00000636176|C20orf204	ENSG00000196421|ENST00000636176|C20orf204	ENSG00000196421|ENST00000636176|C20orf204	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	485.30084228515625	3	485.302675	1452.8862	1.0097	0.00049003	-1.2075	-0.00058599	-0.19772	-9.5956E-05	485.3020682659724	16.477	0.64601	16.554	16.427	17.073	0.07715					46	24	4	0	0	0	0.81892	1	127	127		8.0344	1.7135	1	156250			52026	8051	34823	34836	58741	58741					0.17786742256657817
RTLSAICTPVF	11	Unmodified	_RTLSAICTPVF_					0	0	0		ENST00000501830.2_1_15:30917398-30917659:-|nuORF	ENST00000501830.2_1_15:30917398-30917659:-|nuORF	ENST00000501830.2_1_15:30917398-30917659:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3662109375	2	604.328816	1206.64308	-0.16842	-0.00010178	1.4587	0.00088153	1.2903	0.00077975	604.3300196660094	104.65	0.36828	104.65	104.54	104.91	0					13	8	3	0	0	0	0.17527	1	10783	10783		56.434	9.977	1	94209			52027	12846	34824	34837	58742	58742					0.0480231669675959
RTLSDESICSN	11	Unmodified	_RTLSDESICSN_					0	0	0		nc|ENSG00000116991|Q9P2F8-2|SIPA1L2;ENSG00000116991|ENST00000674635|SIPA1L2	nc|ENSG00000116991|Q9P2F8-2|SIPA1L2	nc|ENSG00000116991|Q9P2F8-2|SIPA1L2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.87939453125	2	612.779884	1223.54522	0.91257	0.0005592	-2.1633	-0.0013256	-1.2507	-0.00076639	612.7781927249578	104.5	0.11558	104.61	104.56	104.67	0.11685					4	2	2	0	0	0	0.14912	1	11092	11092		74.165	24.723	1	161750			52028	2958	34825	34838	58743	58743					-0.05761536689874447
RTLSGPRPGRL	11	Unmodified	_RTLSGPRPGRL_					0	0	0			REV__nc|ENSG00000100593|Q6H9L7-5|ISM2	REV__nc|ENSG00000100593|Q6H9L7-5|ISM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.90960693359375	3	403.910672	1208.71019	1.4026	0.00056654	-2.3482	-0.00094848	-0.9456	-0.00038194	403.9097044639606	65.998	1.3411	66.384	65.959	67.3	0.38582					64	35	2	0	0	0	0.71803	1	7154	7154		28.577	0	1	273570	+		52029	17205	34826	34839	58744	58744					0.11418108022758133
RTLSLIRTRAV	11	Unmodified	_RTLSLIRTRAV_					0	0	0		ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.405029296875	2	643.406778	1284.799	0.024155	1.5542E-05	-1.2013	-0.00077294	-1.1772	-0.0007574	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.69995	1	11018	11018		31.53	0	1	11188000			52030	2953	34827	34840	58745	58745					0.16799523262420735
RTLSLIRTRAV	11	Unmodified	_RTLSLIRTRAV_					0	0	0		ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4056396484375	2	643.406778	1284.799	-0.02708	-1.7423E-05	-1.3385	-0.00086122	-1.3656	-0.00087865	643.4057840301668	105.94	1.5968	105.91	105.23	106.82	-0.025146					165	37	6	0	0	0	0.64498	3	11418	11418;11501;11537		39.253	4.1008	1	14580000			52031	2953	34827	34840	58746;58747;58748	58746					0.16799523262420735
RTLSLIRTRAV	11	Unmodified	_RTLSLIRTRAV_					0	0	0		ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4058227539062	2	643.406778	1284.799	-0.027625	-1.7774E-05	0.31293	0.00020134	0.28531	0.00018357	643.4069538956494	107.53	1.1842	107.49	106.64	107.82	-0.034401					87	27	4	0	0	0	0.73893	1	11689	11689		24.519	0	1	2502500			52032	2953	34827	34840	58749	58749					0.16799523262420735
RTLSLIRTRAV	11	Unmodified	_RTLSLIRTRAV_					0	0	0		ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4055786132812	2	643.406778	1284.799	2.6785	0.0017233	-4.0081	-0.0025788	-1.3296	-0.00085549	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.64498	2	11642	11642;11764		39.253	3.6476	1	14704000			52033	2953	34827	34840	58750;58751	58750					0.16799523262420735
RTLSLIRTRAV	11	Unmodified	_RTLSLIRTRAV_					0	0	0		ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4056396484375	2	643.406778	1284.799	2.6791	0.0017238	-2.3143	-0.001489	0.36483	0.00023474	643.4052640495355	107.03	1.0145	106.99	106.79	107.81	-0.034134					59	23	3	0	0	0	0.69995	1	11909	11909		31.53	5.9558	1	2103900			52034	2953	34827	34840	58752	58752					0.16799523262420735
RTLSLIRTRAV	11	Unmodified	_RTLSLIRTRAV_					0	0	0		ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4058227539062	2	643.406778	1284.799	1.7782	0.0011441	-3.0269	-0.0019475	-1.2486	-0.00080338	643.4046886151041	105.77	1.7293	105.8	105.04	106.77	0.038322					167	40	5	0	0	0	0.64498	3	11497	11497;11556;11604		39.253	8.9351	1	14066000			52035	2953	34827	34840	58753;58754;58755	58753					0.16799523262420735
RTLSLIRTRAV	11	Unmodified	_RTLSLIRTRAV_					0	0	0		ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4058837890625	2	643.406778	1284.799	1.6039	0.001032	-2.7438	-0.0017654	-1.1399	-0.00073343	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.64498	5	11181	11181;11300;11419;11577;11590		39.253	3.6343	1	21138000			52036	2953	34827	34840	58756;58757;58758;58759;58760	58756					0.16799523262420735
RTLSLIRTRAV	11	Unmodified	_RTLSLIRTRAV_					0	0	0		ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	ENSG00000116898|ENST00000373116|MRPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4058837890625	2	643.406778	1284.799	0.94326	0.0006069	-1.4069	-0.0009052	-0.46364	-0.00029831	643.4057417471539	106.19	1.8486	106.29	106.11	107.96	0.099007					180	44	5	0	0	0	0.60058	6	11574	11357;11405;11429;11502;11525;11574		44.377	7.9304	1	16037000			52037	2953	34827	34840	58761;58762;58763;58764;58765;58766	58766					0.16799523262420735
RTLSNINKLDS	11	Unmodified	_RTLSNINKLDS_					0	0	0			REV__ENSG00000176542|ENST00000316407|USF3	REV__ENSG00000176542|ENST00000316407|USF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	630.848876953125	2	630.848958	1259.68336	0.93041	0.00058695	-0.30874	-0.00019477	0.62167	0.00039218	630.8485742155608	110.42	0.71348	110.5	110.27	110.98	0.073685					52	20	4	0	0	0	0.638	1	11878	11878		40.058	8.5284	1	2069700	+		52038	22133	34828	34841	58767	58767					0.06390954620906086
RTLTDKLWPN	10	Unmodified	_RTLTDKLWPN_					0	0	0			REV__nc|ENSG00000197162|A8K8V0-2|ZNF785	REV__nc|ENSG00000197162|A8K8V0-2|ZNF785	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3463745117188	2	622.343312	1242.67207	0.74038	0.00046077	4.337	0.0026991	5.0774	0.0031599	622.3461915832663	95.989	2.2851	96.036	95.209	97.494	0.046989					118	53	3	0	0	0	0.86106	1	10178	10178		33.922	2.3918	1	363580	+		52039	23204	34829	34842	58768	58768					0.06044177317426147
RTLTQPPGLE	10	Unmodified	_RTLTQPPGLE_					0	0	0			REV__ENST00000470620.1_1_6:149944404-149969679:-|nuORF	REV__ENST00000470620.1_1_6:149944404-149969679:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	556.3065185546875	2	556.308938	1110.60332	-1.4316	-0.00079643	-0.52475	-0.00029192	-1.9564	-0.0010884	556.308699276366	90.429	3.4878	90.605	89.562	93.05	0.17579					165	82	3	0	0	0	0.80179	1	8988	8988		39.253	1.4413	1	466610	+		52040	27214	34830	34843	58769	58769					0.0524451301771478
RTLTQVISV	9	Unmodified	_RTLTQVISV_					0	0	0		ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.8061828613281	2	508.808574	1015.60259	-0.055037	-2.8003E-05	-1.6702	-0.00084983	-1.7253	-0.00087783	508.8076940504988	90.104	1.2492	90.172	89.514	90.764	0.068703					64	28	4	0	0	0	0.78124	1	9241	9241		30.318	4.7437	1	1111600			52041	7925	34831	34844	58770	58770					0.09541718368654983
RTLVFVDLL	9	Unmodified	_RTLVFVDLL_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3272705078125	2	538.329142	1074.64373	-0.54037	-0.0002909	-3.5463	-0.0019091	-4.0867	-0.0022	538.3271646052639	101.22	3.8034	101.22	100.55	104.36	0					314	93	6	0	0	0	0.77696	1	10476	10476		31.53	2.3598	1	48186000	+		52042	17157	34832	34845	58771	58771					0.10939479408125408
RTLVFVDLL	9	Unmodified	_RTLVFVDLL_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3264770507812	2	538.329142	1074.64373	-0.15636	-8.4174E-05	-4.0212	-0.0021647	-4.1776	-0.0022489	538.3269075153179	101.16	2.8222	101.19	100.44	103.26	0.031036					310	67	7	0	0	0	0.77244	1	10862	10862		32.812	0.85756	1	74691000	+		52043	17157	34832	34845	58772	58772					0.10939479408125408
RTLVFVDLL	9	Unmodified	_RTLVFVDLL_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3265991210938	2	538.329142	1074.64373	0.070633	3.8024E-05	-4.4231	-0.0023811	-4.3525	-0.0023431	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.76255	1	10615	10615		35.618	2.8059	1	109840000	+		52044	17157	34832	34845	58773	58773					0.10939479408125408
RTLVFVDLL	9	Unmodified	_RTLVFVDLL_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3265380859375	2	538.329142	1074.64373	-1.4901	-0.00080219	-2.8806	-0.0015507	-4.3708	-0.0023529	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.76764	1	10579	10579		34.173	2.2177	1	93615000	+		52045	17157	34832	34845	58774	58774					0.10939479408125408
RTLVIKSGSA	10	Unmodified	_RTLVIKSGSA_					0	0	0			REV__ENSG00000117408|ENST00000372343|IPO13	REV__ENSG00000117408|ENST00000372343|IPO13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3132934570312	2	516.314023	1030.61349	-0.046988	-2.426E-05	0.67067	0.00034627	0.62368	0.00032201	516.3143957799225	103.64	1.2184	103.63	103.07	104.29	-0.0035706					70	29	3	0	0	0	0.86587	1	11131	11131		29.17	0.020503	1	638740	+		52046	18259	34833	34846	58775	58775					0.0994112074295117
RTLVIKSGSA	10	Unmodified	_RTLVIKSGSA_					0	0	0			REV__ENSG00000117408|ENST00000372343|IPO13	REV__ENSG00000117408|ENST00000372343|IPO13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3134155273438	2	516.314023	1030.61349	0.81864	0.00042267	-0.69207	-0.00035732	0.12657	6.535E-05	516.3135947493408	102.18	1.1683	102.31	101.93	103.1	0.13523					75	28	3	0	0	0	0.86106	1	10734	10734		33.922	9.7189	1	1280900	+		52047	18259	34833	34846	58776	58776					0.0994112074295117
RTLVIKSGSA	10	Unmodified	_RTLVIKSGSA_					0	0	0			REV__ENSG00000117408|ENST00000372343|IPO13	REV__ENSG00000117408|ENST00000372343|IPO13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3143310546875	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86621	1	12333	12333		26.063	1.5442	1	4038100	+		52048	18259	34833	34846	58777	58777					0.0994112074295117
RTLVILMA	8	Unmodified	_RTLVILMA_					0	0	0		ENST00000447637.1_1_3:185146313-185146391:+|nuORF	ENST00000447637.1_1_3:185146313-185146391:+|nuORF	ENST00000447637.1_1_3:185146313-185146391:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	458.78790283203125	2	458.786056	915.557558	-0.12843	-5.8921E-05	3.1011	0.0014228	2.9727	0.0013638	458.7874632709064	93.167	2.7299	93.237	92.412	95.142	0.069862					206	64	5	0	0	0	0.90465	1	9774	9774		40.573	4.9543	1	16426000			52049	11849	34834	34847	58778	58778					0.09640196301768356
RTLVLGKRPVL	11	Unmodified	_RTLVLGKRPVL_					0	0	0		nc|ENSG00000180592|Q1XH10-2|SKIDA1;ENSG00000180592|ENST00000449193|SKIDA1	nc|ENSG00000180592|Q1XH10-2|SKIDA1	nc|ENSG00000180592|Q1XH10-2|SKIDA1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.9223937988281	3	417.946835	1250.81868	3.1801	0.0013291	3.8598	0.0016132	7.0399	0.0029423	417.94910503238106	105.73	0.57261	105.77	105.25	105.83	0.038322					16	13	2	0	0	0	0.17729	1	11562	11562		12.957	0	1	59755			52050	7335	34835	34848	58779	58779					0.20329899273156116
RTLVLRLAQLI	11	Unmodified	_RTLVLRLAQLI_					0	0	0		ENST00000438378.2_1_2:132275414-132277996:+|nuORF;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;nc|ENSG00000136699|Q9NXE4-5|SMPD4;nc|ENSG00000136699|Q9NXE4-9|SMPD4;nc|ENSG00000136699|Q9NXE4-10|SMPD4;nc|ENSG00000136699|Q9NXE4-7|SMPD4;nc|ENSG00000136699|Q9NXE4-8|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;ENSG00000136699|ENST00000680298|SMPD4;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4	ENST00000438378.2_1_2:132275414-132277996:+|nuORF	ENST00000438378.2_1_2:132275414-132277996:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3924560546875	2	648.429722	1294.84489	1.6035	0.0010398	-1.0331	-0.00066989	0.57041	0.00036987	648.4290134798842	106.39	0.13194	106.54	106.47	106.6	0.14843					4	2	2	0	0	0	0.17925	1	11388	11388		14.137	3.8719	1	32637			52051	4127	34836	34849	58780	58780					0.2092616844463464
RTLVQRIHQ	9	Unmodified	_RTLVQRIHQ_					0	0	0		ENST00000598375.5_1_19:18699611-18699888:+|nuORF;nc|ENSG00000006015|Q96EN9-3|REX1BD;ENSG00000006015|ENST00000358607|REX1BD	ENST00000598375.5_1_19:18699611-18699888:+|nuORF	ENST00000598375.5_1_19:18699611-18699888:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8424072265625	2	575.843813	1149.67307	1.9391	0.0011166	-3.5988	-0.0020723	-1.6596	-0.00095569	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.78983	1	9858	9858		27.882	1.1893	1	5986700			52052	690	34837	34850	58781	58781					0.10422436476983421
RTLVSISKGT	10	Unmodified	_RTLVSISKGT_					0	0	0			REV__ENSG00000205108|ENST00000378788|FAM205A	REV__ENSG00000205108|ENST00000378788|FAM205A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3186645507812	2	531.319306	1060.62406	2.5637	0.0013622	-2.509	-0.0013331	0.05478	2.9106E-05	531.3177191515188	95.1	2.5434	95.042	94.557	97.1	-0.057526					188	59	5	0	0	0	0.86047	1	10170	10170		23.523	0.48021	1	4072600	+		52053	23541	34838	34851	58782	58782					0.0961710339736328
RTLVSISKGT	10	Unmodified	_RTLVSISKGT_					0	0	0			REV__ENSG00000205108|ENST00000378788|FAM205A	REV__ENSG00000205108|ENST00000378788|FAM205A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.3187255859375	2	531.319306	1060.62406	0.78203	0.00041551	-0.64722	-0.00034388	0.13481	7.1626E-05	531.3186205937698	94.916	2.6028	95.079	94.616	97.219	0.16307					179	61	5	0	0	0	0.86698	1	9699	9699		28.081	1.3886	1	2661600	+		52054	23541	34838	34851	58783	58783					0.0961710339736328
RTLWPKGMA	9	Unmodified	_RTLWPKGMA_					0	0	0		ENST00000415913.5_1_2:209104706-209106750:-|nuORF	ENST00000415913.5_1_2:209104706-209106750:-|nuORF	ENST00000415913.5_1_2:209104706-209106750:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2933349609375	2	530.292037	1058.56952	2.0317	0.0010774	0.45656	0.00024211	2.4882	0.0013195	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.67345	1	9662	9662		42.396	5.237	1	1811300			52055	11388	34839	34852	58784	58784					0.04257813044955583
RTLWPKGMA	9	Unmodified	_RTLWPKGMA_					0	0	0		ENST00000415913.5_1_2:209104706-209106750:-|nuORF	ENST00000415913.5_1_2:209104706-209106750:-|nuORF	ENST00000415913.5_1_2:209104706-209106750:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2933349609375	2	530.292037	1058.56952	0.74166	0.0003933	1.8072	0.00095832	2.5488	0.0013516	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.58668	1	9215	9215		47.657	1.6851	1	2081200			52056	11388	34839	34852	58785	58785					0.04257813044955583
RTLWPKGMA	9	Unmodified	_RTLWPKGMA_					0	0	0		ENST00000415913.5_1_2:209104706-209106750:-|nuORF	ENST00000415913.5_1_2:209104706-209106750:-|nuORF	ENST00000415913.5_1_2:209104706-209106750:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.29296875	2	530.292037	1058.56952	1.6334	0.0008662	0.64495	0.00034201	2.2784	0.0012082	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.76764	1	10687	10687		34.173	2.2177	1	1816400			52057	11388	34839	34852	58786	58786					0.04257813044955583
RTNERLKVAL	10	Unmodified	_RTNERLKVAL_					0	0	0		ENST00000566703.1_1_16:30776326-30777900:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;ENSG00000103549|ENST00000324685|RNF40	ENST00000566703.1_1_16:30776326-30777900:+|nuORF	ENST00000566703.1_1_16:30776326-30777900:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.58123779296875	3	400.578811	1198.7146	2.7176	0.0010886	1.583	0.00063413	4.3007	0.0017228	400.57928348734663	112.87	0.76526	112.84	112.7	113.46	-0.024811					36	18	3	0	0	0	0.86225	1	12480	12480		32.751	4.1738	1	3158500			52058	2092	34840	34853	58787	58787					0.12319572445653648
RTNERLKVAL	10	Unmodified	_RTNERLKVAL_					0	0	0		ENST00000566703.1_1_16:30776326-30777900:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;ENSG00000103549|ENST00000324685|RNF40	ENST00000566703.1_1_16:30776326-30777900:+|nuORF	ENST00000566703.1_1_16:30776326-30777900:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.580322265625	3	400.578811	1198.7146	3.1805	0.001274	0.74448	0.00029822	3.925	0.0015723	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.85259	2	12332	12322;12332		25.126	1.6033	1	4827300			52059	2092	34840	34853	58788;58789	58789					0.12319572445653648
RTNIKSLSW	9	Unmodified	_RTNIKSLSW_					0	0	0			REV__ENST00000272227.7_1_2:10937307-10942651:-|nuORF	REV__ENST00000272227.7_1_2:10937307-10942651:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.8110961914062	2	552.811648	1103.60874	-1.0661	-0.00058937	1.0693	0.00059113	0.003183	1.7596E-06	552.8121887831883	28.272	0.78354	28.175	27.885	28.669	-0.096945					41	18	3	0	0	0	0.64922	1	1674	1674		44.117	3.3386	1	385320	+		52060	24543	34841	34854	58790	58790					0.061082366001983246
RTNLPTAH	8	Unmodified	_RTNLPTAH_					0	0	0		ENST00000219235.4_1_16:57399964-57400084:+|nuORF	ENST00000219235.4_1_16:57399964-57400084:+|nuORF	ENST00000219235.4_1_16:57399964-57400084:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.24755859375	2	455.248683	908.482814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.916	1	52.933	52.433	53.433	0.017487								0	0	0	0.29755	1	4635	4635		24.203	0	1				52061	9160	34842	34855	58791	58791					0.024911498147503153
RTNQFSVTR	9	Unmodified	_RTNQFSVTR_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;ENST00000488384.1_1_20:34144716-34145272:+|nuORF	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.7964477539062	2	554.796529	1107.5785	-0.23484	-0.00013029	0.43375	0.00024064	0.1989	0.00011035	554.796558209616	26.745	0.66422	26.786	26.47	27.134	0.040833					48	20	4	0	0	0	0.18893	1	1162	1162		76.17	10.704	1	214690			52062	3435	34843	34856	58792	58792					0.029018779349826218
RTNQFSVTR	9	Unmodified	_RTNQFSVTR_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;ENST00000488384.1_1_20:34144716-34145272:+|nuORF	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7965698242188	2	554.796529	1107.5785	0.2334	0.00012949	-0.25519	-0.00014158	-0.021788	-1.2088E-05	554.7962668415221	26.797	1.0384	26.759	26.435	27.473	-0.038523					39	24	2	0	0	0	0.29259	3	1230	1218;1230;1249		65.465	6.5329	1	326390			52063	3435	34843	34856	58793;58794;58795	58794					0.029018779349826218
RTNQFSVTR	9	Unmodified	_RTNQFSVTR_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;ENST00000488384.1_1_20:34144716-34145272:+|nuORF	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.79638671875	2	554.796529	1107.5785	0.9008	0.00049976	-0.81746	-0.00045352	0.08334	4.6236E-05	554.7958908144287	26.927	0.75191	26.899	26.557	27.309	-0.027706					40	18	3	0	0	0	0.27557	1	1190	1190		66.962	1.4965	1	237050			52064	3435	34843	34856	58796	58796					0.029018779349826218
RTPAAARAS	9	Unmodified	_RTPAAARAS_					0	0	0			REV__nc|ENSG00000170011|Q8NFW9-6|MYRIP	REV__nc|ENSG00000170011|Q8NFW9-6|MYRIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7541198730469	2	450.754133	899.493713	-1.264	-0.00056978	1.3912	0.00062708	0.12712	5.7301E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.76419	1	7539	7539		35.152	2.3396	1	414240	+		52065	30024	34844	34857	58797	58797					0.03994552189033129
RTPGAPRKHLP	11	Unmodified	_RTPGAPRKHLP_					0	0	0		ENST00000359246.8_1_9:96439961-96440297:+|nuORF	ENST00000359246.8_1_9:96439961-96440297:+|nuORF	ENST00000359246.8_1_9:96439961-96440297:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	615.3828735351562	2	615.364913	1228.71527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.048	1	73.048	72.548	73.548	0								0	0	0	0.56276	1	6568	6568		19.997	0.89325	1				52066	10424	34845	34858	58798	58798					0.11006411885364287
RTPGSVRP	8	Unmodified	_RTPGSVRP_					0	0	0			REV__ENST00000471958.1_1_2:205410595-205422763:+|nuORF	REV__ENST00000471958.1_1_2:205410595-205422763:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2523193359375	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.89494	1	7930	7930		37.159	5.2042	1	3322700	+		52067	26306	34846	34859	58799	58799					0.04839453677379879
RTPLHLATT	9	Unmodified	_RTPLHLATT_					0	0	0		ENST00000487527.5_1_17:27916841-27940597:+|nuORF;ENSG00000198720|ENST00000394859|ANKRD13B	ENST00000487527.5_1_17:27916841-27940597:+|nuORF	ENST00000487527.5_1_17:27916841-27940597:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	505.29217529296875	2	505.293091	1008.57163	0.77686	0.00039254	-3.8762	-0.0019586	-3.0993	-0.0015661	505.29100883966504	97.18	2.3666	97.343	96.835	99.202	0.16316					149	54	4	0	0	0	0.67345	1	10101	10101		42.396	4.5846	1	1148700			52068	8313	34847	34860	58800	58800					0.06768565054414921
RTPLPLAGPP	10	Unmodified	_RTPLPLAGPP_					0	0	0		ENSG00000124557|ENST00000684113|BTN1A1	ENSG00000124557|ENST00000684113|BTN1A1	ENSG00000124557|ENST00000684113|BTN1A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.80645751953125	2	509.805834	1017.59712	-0.74015	-0.00037733	-1.6572	-0.00084487	-2.3974	-0.0012222	509.8051026615143	89.329	0.62227	89.8	89.476	90.098	0.47068					28	14	2	0	0	0	0.37624	1	10614	10614		31.53	20.664	1	460230			52069	3340	34848	34861	58801	58801					0.08902039576844345
RTPRQKPPL	9	Unmodified	_RTPRQKPPL_					0	0	0		chr6:31779524-31779608|16|22.56|0.23|6.61|-|1|None,VARS1|1	chr6:31779524-31779608|16|22.56|0.23|6.61|-|1|None,VARS1|1	chr6:31779524-31779608|16|22.56|0.23|6.61|-|1|None,VARS1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8402099609375	2	546.835457	1091.65636	3.386	0.0018516	4.2852	0.0023433	7.6712	0.0041949	546.8379771318001	101.02	3.777	100.97	100.36	104.13	-0.052116					284	90	6	0	0	0	0.62081	3	11098	11098;11122;11250		45.952	5.2042	1	39176000			52070	475	34849	34862	58802;58803;58804	58802					0.11419935591038666
RTPSTRLLSFL	11	Unmodified	_RTPSTRLLSFL_					0	0	0			REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	645.8850708007812	2	645.880062	1289.74557	1.8764	0.0012119	3.7261	0.0024066	5.6025	0.0036186	645.8823845772775	105.75	1.6428	105.79	105.12	106.77	0.038322					94	38	3	0	0	0	0.75779	1	11569	11569		22.58	7.2465	1	1452000	+		52071	19889	34850	34863	58805	58805					0.11228725759883673
RTPTLQRALLN	11	Unmodified	_RTPTLQRALLN_					0	0	0		nc|ENSG00000161558|Q96AN5-2|TMEM143;ENSG00000161558|ENST00000293261|TMEM143	nc|ENSG00000161558|Q96AN5-2|TMEM143	nc|ENSG00000161558|Q96AN5-2|TMEM143	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8825073242188	2	641.883136	1281.75172	1.6823	0.0010798	-2.7332	-0.0017544	-1.051	-0.00067461	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.72106	1	10314	10314		28.081	1.3886	1	3772700			52072	5642	34851	34864	58806	58806					0.12211243991418996
RTQARSPWC	9	Unmodified	_RTQARSPWC_					0	0	0		ENST00000538547.4_1_20:18296891-18297188:+|nuORF	ENST00000538547.4_1_20:18296891-18297188:+|nuORF	ENST00000538547.4_1_20:18296891-18297188:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.8110961914062	2	552.772	1103.52945	-1.0686	-0.00059067	2.0736	0.0011462	1.005	0.00055555	552.7746868815773	28.195	0.44539	28.098	27.929	28.375	-0.096945					13	10	2	0	0	0	0.20789	1	1674	1674		66.429	16.988	1	62741			52073	13468	34852	34865	58807	58807					-0.018177336256030685
RTQLRLLEDA	10	Unmodified	_RTQLRLLEDA_					0	0	0		ENSG00000058453|ENST00000375541|CROCC;nc|ENSG00000058453|Q5TZA2-2|CROCC	ENSG00000058453|ENST00000375541|CROCC;nc|ENSG00000058453|Q5TZA2-2|CROCC	ENSG00000058453|ENST00000375541|CROCC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5645751953125	3	405.566571	1213.67788	-0.18903	-7.6663E-05	-4.2855	-0.0017381	-4.4745	-0.0018147	405.56470246140424	60.148	1.7799	60.134	59.159	60.939	-0.013729					123	48	3	0	0	0	0.86338	1	5632	5632		31.634	2.3893	1	242840			52074	1044;14759	34853	34866	58808	58808					0.0795927582908007
RTQLRLLEDA	10	Unmodified	_RTQLRLLEDA_					0	0	0		ENSG00000058453|ENST00000375541|CROCC;nc|ENSG00000058453|Q5TZA2-2|CROCC	ENSG00000058453|ENST00000375541|CROCC;nc|ENSG00000058453|Q5TZA2-2|CROCC	ENSG00000058453|ENST00000375541|CROCC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.564453125	3	405.566571	1213.67788	-1.8662	-0.00075687	-2.6627	-0.0010799	-4.5289	-0.0018368	405.5653987385133	59.885	1.7634	59.979	59.006	60.769	0.094059					140	62	3	0	0	0	0.86446	1	5189	5189		30.569	3.5215	1	349460			52075	1044;14759	34853	34866	58809	58809					0.0795927582908007
RTQNVLGEK	9	Unmodified	_RTQNVLGEK_					0	0	0		ENST00000529173.5_1_11:75110591-75112804:+|nuORF;ENST00000407940.1_1_6:7339375-7339741:-|nuORF;ENSG00000149273|ENST00000531188|RPS3;nc|ENSG00000149273|P23396-2|RPS3	ENST00000529173.5_1_11:75110591-75112804:+|nuORF	ENST00000529173.5_1_11:75110591-75112804:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7933959960938	2	522.793455	1043.57236	1.2723	0.00066513	-1.5156	-0.00079234	-0.24333	-0.00012721	522.7925484697116	21.895	1.1217	21.452	20.87	21.992	-0.44324					57	25	4	0	0	0	0.16305	1	839	839		81.525	11.897	1	389000			52076	5013	34854	34867	58810	58810					0.05231359703475391
RTQNVLGEK	9	Unmodified	_RTQNVLGEK_					0	0	0		ENST00000529173.5_1_11:75110591-75112804:+|nuORF;ENST00000407940.1_1_6:7339375-7339741:-|nuORF;ENSG00000149273|ENST00000531188|RPS3;nc|ENSG00000149273|P23396-2|RPS3	ENST00000529173.5_1_11:75110591-75112804:+|nuORF	ENST00000529173.5_1_11:75110591-75112804:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.7940673828125	2	522.793455	1043.57236	0.077043	4.0278E-05	-0.16914	-8.8425E-05	-0.092097	-4.8148E-05	522.7932298193799	22.078	0.91792	21.467	21.072	21.99	-0.6107					46	22	4	0	0	0	0.10508	2	871	860;871		91.265	23.772	1	468110			52077	5013	34854	34867	58811;58812	58812					0.05231359703475391
RTQSNRISF	9	Unmodified	_RTQSNRISF_					0	0	0			REV__nc|ENSG00000184979|Q9UMW8-2|USP18	REV__nc|ENSG00000184979|Q9UMW8-2|USP18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.7962646484375	2	554.796529	1107.5785	-0.23484	-0.00013029	0.43375	0.00024064	0.1989	0.00011035	554.796558209616	26.745	0.66422	26.786	26.47	27.134	0.040833					48	20	4	0	0	0	0.51592	1	1132	1132		51.193	1.7511	1	214690	+		52078	22717	34855	34868	58813	58813					0.029018779349826218
RTRAAIGGR	9	Unmodified	_RTRAAIGGR_					0	0	0		ENST00000548760.2_1_12:98909310-98909562:-|nuORF	ENST00000548760.2_1_12:98909310-98909562:-|nuORF	ENST00000548760.2_1_12:98909310-98909562:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.28839111328125	2	479.288674	956.562795	-0.48591	-0.00023289	0.36515	0.00017501	-0.12076	-5.788E-05	479.2887487505733	16.967	0.38927	16.356	16.177	16.567	-0.6107					20	8	3	0	0	0	0.30689	1	193	193		64.207	4.089	1	529470			52079	13623	34856	34869	58814	58814					0.0827763620859514
RTRALSLAS	9	Unmodified	_RTRALSLAS_					0	0	0		nc|ENSG00000158321|Q8WXX7-3|AUTS2;nc|ENSG00000158321|Q8WXX7-2|AUTS2;ENSG00000158321|ENST00000342771|AUTS2	nc|ENSG00000158321|Q8WXX7-3|AUTS2	nc|ENSG00000158321|Q8WXX7-3|AUTS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7905578613281	2	487.790715	973.566878	-1.3135	-0.00064074	1.1066	0.00053979	-0.20694	-0.00010094	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.78536	1	8478	8478		29.15	1.2673	1	2239000			52080	5472	34857	34870	58815	58815					0.07903680911658739
RTRARAIQLL	10	Unmodified	_RTRARAIQLL_					0	0	0		nc|ENSG00000155229|Q96T76-8|MMS19;nc|ENSG00000155229|Q96T76-9|MMS19;ENSG00000155229|ENST00000438925|MMS19;nc|ENSG00000155229|Q96T76-5|MMS19;nc|ENSG00000155229|Q96T76-7|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.3798828125	2	599.380563	1196.74657	3.2712	0.0019607	-4.2058	-0.0025209	-0.93465	-0.00056021	599.3778849492661	103.51	3.7036	103.46	103.04	106.74	-0.043755					239	88	5	0	0	0	0.8608	1	11349	11349		34.173	2.6427	1	11967000			52081	15006	34858	34871	58816	58816					0.15606984919463684
RTRATTPTATP	11	Unmodified	_RTRATTPTATP_					0	0	0			REV__nc|ENSG00000176945|Q8N307-3|MUC20	REV__nc|ENSG00000176945|Q8N307-3|MUC20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	586.8240966796875	2	586.822744	1171.63093	-1.3322	-0.00078178	3.2723	0.0019202	1.9401	0.0011385	586.8245139842418	110.15	1.3506	110.15	109.98	111.33	0.0060501					111	48	4	0	0	0	0.68378	1	11746	11746		34.173	2.6427	1	5492600	+		52082	22162	34859	34872	58817	58817					0.05198416277926299
RTREARANTFK	11	Unmodified	_RTREARANTFK_					0	0	0		L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|65|3|sense	L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|65|3|sense	L1PA4_dup4213|chr5:141111372-141114525:-|1.4848512415952035|0.2229743646842631|2.74|63.0|65|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2583923339844	3	450.584736	1348.73238	2.4013	0.001082	-1.878	-0.00084621	0.5233	0.00023579	450.58399754483816	26.226	0.52499	25.886	25.616	26.141	-0.34035					14	11	2	0	0	0	0.17243	1	1422	1422		48.602	14.515	1	92653			52083	14634	34860	34873	58818	58818					0.07196287700480752
RTRERYGLI	9	Unmodified	_RTRERYGLI_					0	0	0			REV__ENST00000448692.5_1_X:15693836-15706868:+|nuORF	REV__ENST00000448692.5_1_X:15693836-15706868:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3357543945312	2	582.335821	1162.65709	-0.30079	-0.00017516	0.38865	0.00022633	0.087864	5.1166E-05	582.3359512116871	20.122	0.73913	19.652	19.35	20.089	-0.46967					42	15	4	0	0	0	0.55097	1	596	596		49.442	0	1	789020	+		52084	26843	34861	34874	58819	58819					0.0822673024008509
RTRGLRLAVIS	11	Unmodified	_RTRGLRLAVIS_					0	0	0		ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.392578125	2	621.39367	1240.77279	-0.28789	-0.0001789	-1.2764	-0.00079315	-1.5643	-0.00097204	621.392781910036	104.72	2.6015	104.71	104.23	106.84	-0.014809					230	61	5	0	0	0	0.53361	1	11386	11386		49.536	16.724	1	11881000			52085	3069	34862	34875	58820	58820					0.1620325409094221
RTRGLRLAVIS	11	Unmodified	_RTRGLRLAVIS_					0	0	0		ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3925170898438	2	621.39367	1240.77279	1.3	0.00080781	-2.832	-0.0017598	-1.532	-0.00095195	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.7342	2	11150	11020;11150		25.574	3.6142	1	23079000			52086	3069	34862	34875	58821;58822	58822					0.1620325409094221
RTRGLRLAVIS	11	Unmodified	_RTRGLRLAVIS_					0	0	0		ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3923950195312	2	621.39367	1240.77279	0.9213	0.00057249	-2.6214	-0.0016289	-1.7001	-0.0010564	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.70737	1	11069	11069		30.318	3.6248	1	22352000			52087	3069	34862	34875	58823	58823					0.1620325409094221
RTRGLRLAVIS	11	Unmodified	_RTRGLRLAVIS_					0	0	0		ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.392822265625	2	621.39367	1240.77279	-1.2196	-0.00075786	-0.45293	-0.00028145	-1.6726	-0.0010393	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.66929	2	11018	11018;11090		36.447	6.129	1	23459000			52088	3069	34862	34875	58824;58825	58824					0.1620325409094221
RTRGLRLAVIS	11	Unmodified	_RTRGLRLAVIS_					0	0	0		ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.39306640625	2	621.39367	1240.77279	-1.2196	-0.00075786	0.58312	0.00036235	-0.6365	-0.00039552	621.3939066015827	106.23	1.0134	106.28	106.14	107.15	0.053757					87	23	4	0	0	0	0.72106	2	11334	11334;11346		28.081	3.5623	1	1823300			52089	3069	34862	34875	58826;58827	58826					0.1620325409094221
RTRGLRLAVIS	11	Unmodified	_RTRGLRLAVIS_					0	0	0		ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	ENSG00000119431|ENST00000374180|HDHD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3943481445312	2	621.39367	1240.77279	-1.2196	-0.00075784	0.59815	0.00037168	-0.62144	-0.00038616	621.3938902114081	107.49	0.83601	107.53	107.1	107.93	0.036118					63	20	4	0	0	0	0.74763	1	11436	11436		22.58	1.6327	1	905080			52090	3069	34862	34875	58828	58828					0.1620325409094221
RTRKPPKHS	9	Unmodified	_RTRKPPKHS_					0	0	0			REV__ENSG00000139832|ENST00000267328|RAB20	REV__ENSG00000139832|ENST00000267328|RAB20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8302001953125	2	553.830706	1105.64686	1.287	0.00071279	-2.2482	-0.0012451	-0.96123	-0.00053236	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.77244	2	9396	9396;9444		32.812	2.3088	1	5348100	+		52091	19573	34863	34876	58829;58830	58829					0.09826167305504896
RTRKRRRWRYS	11	Unmodified	_RTRKRRRWRYS_					0	0	0		ENST00000433071.2_1_21:32931573-32932426:+|nuORF	ENST00000433071.2_1_21:32931573-32932426:+|nuORF	ENST00000433071.2_1_21:32931573-32932426:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.8528442382812	3	540.985457	1619.93454	-0.03929	-2.1255E-05	0.82136	0.00044435	0.78207	0.00042309	540.9856176607904	15.879	0.22852	15.926	15.759	15.987	0.047803					19	8	3	0	0	0	0.18422	1	81	81		1.3219	0.95051	1	109040			52092	11679	34864	34877	58831	58831					0.14937235896582024
RTRKRRRWRYS	11	Unmodified	_RTRKRRRWRYS_					0	0	0		ENST00000433071.2_1_21:32931573-32932426:+|nuORF	ENST00000433071.2_1_21:32931573-32932426:+|nuORF	ENST00000433071.2_1_21:32931573-32932426:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	540.985457	1619.93454	-1.7047	-0.00092224	2.5159	0.0013611	0.81116	0.00043883	540.9865678951958	16.013	0.14899	16.013	15.918	16.067	0	0.089566	0.0029361	NaN	1.3219	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36851			52093	11679	34864	34877							0.14937235896582024
RTRKRRRWRYS	11	Unmodified	_RTRKRRRWRYS_					0	0	0		ENST00000433071.2_1_21:32931573-32932426:+|nuORF	ENST00000433071.2_1_21:32931573-32932426:+|nuORF	ENST00000433071.2_1_21:32931573-32932426:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	540.985457	1619.93454	0.12146	6.5708E-05	0.50473	0.00027305	0.62619	0.00033876	541.320099175979	15.969	0.19611	16.028	15.931	16.127	0.059269	0.10485	-0.00032792	NaN	1.3219	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105790			52094	11679	34864	34877							0.14937235896582024
RTRKRRRWRYS	11	Unmodified	_RTRKRRRWRYS_					0	0	0		ENST00000433071.2_1_21:32931573-32932426:+|nuORF	ENST00000433071.2_1_21:32931573-32932426:+|nuORF	ENST00000433071.2_1_21:32931573-32932426:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	540.985457	1619.93454	0.90407	0.00048909	-0.19777	-0.00010699	0.7063	0.0003821	540.9852337777384	15.997	0.21234	15.973	15.858	16.071	-0.024035	0.050167	-0.001468	NaN	1.3219	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93358			52095	11679	34864	34877							0.14937235896582024
RTRKRRRWRYS	11	Unmodified	_RTRKRRRWRYS_					0	0	0		ENST00000433071.2_1_21:32931573-32932426:+|nuORF	ENST00000433071.2_1_21:32931573-32932426:+|nuORF	ENST00000433071.2_1_21:32931573-32932426:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	540.985457	1619.93454	-0.017955	-9.7134E-06	1.3439	0.00072701	1.3259	0.00071729	540.9861786900566	16.21	0.18595	15.611	15.508	15.694	-0.59873	-0.31193	0.0010339	NaN	1.3219	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94861			52096	11679	34864	34877							0.14937235896582024
RTRLPVAS	8	Unmodified	_RTRLPVAS_					0	0	0			REV__ENSG00000008226|ENST00000308059|DLEC1	REV__ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2743835449219	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.87479	1	9699	9699		30.504	0	1	47650000	+		52097	16130	34865	34878	58832	58832					0.08152313228504227
RTRLPVAS	8	Unmodified	_RTRLPVAS_					0	0	0			REV__ENSG00000008226|ENST00000308059|DLEC1	REV__ENSG00000008226|ENST00000308059|DLEC1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27374267578125	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.37	1	113.34	112.84	113.84	-0.024811								0	0	0	0.2939	1	12542	12542		27.882	9.5578	1		+		52098	16130	34865	34878	58833	58833					0.08152313228504227
RTRLPVAS	8	Unmodified	_RTRLPVAS_					0	0	0			REV__ENSG00000008226|ENST00000308059|DLEC1	REV__ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2744445800781	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.87479	1	9833	9833		30.504	0	1	51698000	+		52099	16130	34865	34878	58834	58834					0.08152313228504227
RTRLPVAS	8	Unmodified	_RTRLPVAS_					0	0	0			REV__ENSG00000008226|ENST00000308059|DLEC1	REV__ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2742919921875	2	450.274701	898.534849	-1.2506	-0.00056311	0.52833	0.00023789	-0.72226	-0.00032522	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.87479	1	9667	9667		30.504	0	1	44812000	+		52100	16130	34865	34878	58835	58835					0.08152313228504227
RTRLPVAS	8	Unmodified	_RTRLPVAS_					0	0	0			REV__ENSG00000008226|ENST00000308059|DLEC1	REV__ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.27435302734375	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.89043	1	9469	9469		35.618	2.8059	1	41438000	+		52101	16130	34865	34878	58836	58836					0.08152313228504227
RTRLYSQP	8	Unmodified	_RTRLYSQP_					0	0	0			REV__ENST00000590582.1_1_19:37825726-37825897:+|nuORF	REV__ENST00000590582.1_1_19:37825726-37825897:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.78228759765625	2	510.78289	1019.55123	0.57365	0.00029301	-0.7572	-0.00038677	-0.18355	-9.3756E-05	510.78246923554457	26.283	0.78617	26.329	26.034	26.821	0.045507					43	21	3	0	0	0	0.9283	1	1091	1091		49.442	3.4693	1	147580	+		52102	29186	34866	34879	58837	58837					0.042233943946030195
RTRNKIRGAS	10	Unmodified	_RTRNKIRGAS_					0	0	0			REV__ENST00000512977.1_1_5:137043266-137071515:-|nuORF	REV__ENST00000512977.1_1_5:137043266-137071515:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.843994140625	2	579.844345	1157.67414	0.46014	0.00026681	-0.94249	-0.0005465	-0.48235	-0.00027969	579.8436677237017	102.22	1.1397	102.27	101.85	102.99	0.043198					70	27	3	0	0	0	0.86218	1	11067	11067		32.812	0	1	1168900	+		52103	27985	34867	34880	58838	58838					0.10160650845887176
RTRSIQGI	8	Unmodified	_RTRSIQGI_					0	0	0			REV__ENST00000524486.5_1_11:804698-804929:-|nuORF	REV__ENST00000524486.5_1_11:804698-804929:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77740478515625	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.409	1	80.546	80.046	81.046	0.13702								0	0	0	0.29452	1	7654	7654		33.516	4.366	1		+		52104	28163	34868	34881	58839	58839					0.07307411740168845
RTRSLRRAG	9	Unmodified	_RTRSLRRAG_					0	0	0		ENST00000258416.7_2_2:233415057-233415225:+|nuORF	ENST00000258416.7_2_2:233415057-233415225:+|nuORF	ENST00000258416.7_2_2:233415057-233415225:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.8262329101562	2	536.825955	1071.63736	0.62192	0.00033386	1.682	0.00090293	2.3039	0.0012368	536.8270298384258	20.926	0.43502	20.467	20.192	20.627	-0.4591					18	10	2	0	0	0	0.78124	1	715	715		30.318	1.1477	1	59672			52105	9370	34869	34882	58840	58840					0.10440399019989854
RTRSLRRAG	9	Unmodified	_RTRSLRRAG_					0	0	0		ENST00000258416.7_2_2:233415057-233415225:+|nuORF	ENST00000258416.7_2_2:233415057-233415225:+|nuORF	ENST00000258416.7_2_2:233415057-233415225:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	536.825955	1071.63736	-0.38914	-0.0002089	2.4988	0.0013414	2.1097	0.0011325	536.8274536740602	21.127	0.51281	20.499	20.208	20.721	-0.62835	0.016126	0.0004617	NaN	30.318	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79009			52106	9370	34869	34882							0.10440399019989854
RTRSNLRILPV	11	Unmodified	_RTRSNLRILPV_					0	0	0		ENSG00000153157|ENST00000283141|SYCP2L	ENSG00000153157|ENST00000283141|SYCP2L	ENSG00000153157|ENST00000283141|SYCP2L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.6181640625	3	442.277244	1323.8099	-1.5331	-0.00067807	1.3431	0.00059402	-0.19004	-8.4051E-05	442.6124906044244	16.153	0.25873	16.201	16.031	16.289	0.047804					15	11	2	0	0	0	0.17586	1	116	116		11.932	0	1	94465			52107	5218	34870	34883	58841	58841					0.1609492563668482
RTRTDLTQTTY	11	Unmodified	_RTRTDLTQTTY_					0	0	0			REV__ENSG00000114541|ENST00000398540|FRMD4B	REV__ENSG00000114541|ENST00000398540|FRMD4B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.779052734375	3	452.568641	1354.68409	-1.1781	-0.00053318	-0.68317	-0.00030918	-1.8613	-0.00084236	452.9029691828357	27.399	0.5264	27.223	26.971	27.497	-0.17559					17	11	2	0	0	0	0.17334	1	1554	1554		21.78	4.6137	1	37376	+		52108	18053	34871	34884	58842	58842					0.02093749269943146
RTRVLSYIR	9	Unmodified	_RTRVLSYIR_					0	0	0			REV__ENSG00000170989|ENST00000305352|S1PR1	REV__ENSG00000170989|ENST00000305352|S1PR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3539428710938	2	582.354014	1162.69348	0.15817	9.2113E-05	-1.1126	-0.00064794	-0.95444	-0.00055582	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.78983	1	11583	11583		27.882	1.1893	1	78004000	+		52109	21707	34872	34885	58843	58843					0.1186360713677459
RTSAGRRLH	9	Unmodified	_RTSAGRRLH_					0	0	0			REV__ENST00000526301.5_1_1:110162158-110172443:+|nuORF	REV__ENST00000526301.5_1_1:110162158-110172443:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.3056030273438	2	527.304855	1052.59516	1.242	0.00065492	-1.1153	-0.0005881	0.12673	6.6823E-05	527.3046705662339	99.127	1.5298	99.174	98.632	100.16	0.047523					112	35	4	0	0	0	0.38563	1	10644	10644		58.782	5.4305	1	1549600	+		52110	28204	34873	34886	58844	58844					0.07096423611596947
RTSALLKQ	8	Unmodified	_RTSALLKQ_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.78228759765625	2	458.782359	915.550165	0.041914	1.923E-05	-0.38631	-0.00017723	-0.3444	-0.000158	458.7821952343748	20.778	1.5787	20.854	20.502	22.08	0.075848					186	78	4	0	0	0	0.37302	2	521	521;562		90.777	11.326	1	8263600	+		52111	20903	34874	34887	58845;58846	58845					0.08901180025702615
RTSAVPRN	8	Unmodified	_RTSAVPRN_					0	0	0			REV__ENSG00000007520|ENST00000007390|TSR3	REV__ENSG00000007520|ENST00000007390|TSR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7540283203125	2	450.754133	899.493713	-0.14135	-6.3713E-05	0.3109	0.00014014	0.16956	7.6428E-05	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.87479	1	8020	8020		30.504	1.3541	1	337080	+		52112	16124	34875	34888	58847	58847					0.03994552189033129
RTSAVPRN	8	Unmodified	_RTSAVPRN_					0	0	0			REV__ENSG00000007520|ENST00000007390|TSR3	REV__ENSG00000007520|ENST00000007390|TSR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7568359375	2	450.754133	899.493713	-1.264	-0.00056978	1.3912	0.00062708	0.12712	5.7301E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.89043	1	7872	7872		35.618	0	1	414240	+		52113	16124	34875	34888	58848	58848					0.03994552189033129
RTSCRGRET	9	Unmodified	_RTSCRGRET_					0	0	0		ENST00000315286.12_1_17:42756285-42757961:-|nuORF	ENST00000315286.12_1_17:42756285-42757961:-|nuORF	ENST00000315286.12_1_17:42756285-42757961:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.2650146484375	2	533.264539	1064.51452	0.031339	1.6712E-05	-0.13292	-7.0883E-05	-0.10158	-5.4171E-05	533.2643217129231	70.337	0.85046	70.375	70.093	70.943	0.038055					92	43	3	0	0	0	0.72402	1	6736	6736		38.806	7.2763	1	1254100			52114	9973	34876	34889	58849	58849					-0.015152254935856035
RTSCRGRET	9	Unmodified	_RTSCRGRET_					0	0	0		ENST00000315286.12_1_17:42756285-42757961:-|nuORF	ENST00000315286.12_1_17:42756285-42757961:-|nuORF	ENST00000315286.12_1_17:42756285-42757961:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	533.264539	1064.51452	-0.033655	-1.7947E-05	0.10606	5.6557E-05	0.072402	3.861E-05	533.2644076607186	70.524	0.71483	70.554	70.288	71.003	0.030495	0.11573	5.4719E-05	NaN	38.806	78	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	932460			52115	9973	34876	34889							-0.015152254935856035
RTSCRGRET	9	Unmodified	_RTSCRGRET_					0	0	0		ENST00000315286.12_1_17:42756285-42757961:-|nuORF	ENST00000315286.12_1_17:42756285-42757961:-|nuORF	ENST00000315286.12_1_17:42756285-42757961:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	533.264539	1064.51452	-0.20043	-0.00010688	0.27831	0.00014841	0.077873	4.1527E-05	533.2644886637158	70.424	0.79086	70.386	70.118	70.909	-0.037865	-0.052461	0.00023843	NaN	38.806	92	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1139600			52116	9973	34876	34889							-0.015152254935856035
RTSEQLSRK	9	Unmodified	_RTSEQLSRK_					0	0	0			REV__nc|ENSG00000012048|P38398-8|BRCA1	REV__nc|ENSG00000012048|P38398-8|BRCA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.809814453125	2	552.809636	1103.60472	0.84574	0.00046753	2.9538	0.0016329	3.7995	0.0021004	552.8111137403027	28.325	0.86969	28.151	27.89	28.76	-0.17336					45	21	3	0	0	0	0.39367	1	1710	1710		58.23	3.4536	1	373020	+		52117	15654	34877	34890	58850	58850					0.05706147106457138
RTSGLLPPG	9	Unmodified	_RTSGLLPPG_					0	0	0			REV__ENST00000498157.1_1_1:109816296-109816506:+|nuORF	REV__ENST00000498157.1_1_1:109816296-109816506:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2581481933594	2	449.261259	896.507966	-0.84381	-0.00037909	-0.64993	-0.00029199	-1.4937	-0.00067108	449.2608028150776	70.775	0.66237	70.737	70.497	71.16	-0.037865					52	32	2	0	0	0	0.76764	1	6871	6871		34.173	0	1	207110	+		52118	27782	34878	34891	58851	58851					0.05557204617332445
RTSHPTRSSRI	11	Unmodified	_RTSHPTRSSRI_					0	0	0			REV__nc|ENSG00000101343|Q9BZJ0-3|CRNKL1	REV__nc|ENSG00000101343|Q9BZJ0-3|CRNKL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	649.3553466796875	2	649.357816	1296.70108	-0.52186	-0.00033888	-2.1763	-0.0014132	-2.6981	-0.001752	649.356419556826	84.149	0.68206	84.584	84.299	84.981	0.43538					31	16	2	0	0	0	0.53361	1	9784	9784		49.536	8.1094	1	863310	+		52119	29745	34879	34892	58852	58852					0.0645971466640276
RTSIQRDL	8	Unmodified	_RTSIQRDL_					0	0	0		ENST00000415495.5_1_19:42311603-42315272:+|nuORF;ENSG00000170956|ENST00000357396|CEACAM3	ENST00000415495.5_1_19:42311603-42315272:+|nuORF	ENST00000415495.5_1_19:42311603-42315272:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.78057861328125	2	494.780348	987.546142	-0.85772	-0.00042438	0.93735	0.00046378	0.07963	3.9399E-05	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.87479	1	8913	8913		30.504	1.3541	1	737700			52120	6627	34880	34893	58853	58853					0.051870905319901794
RTSLATIL	8	Unmodified	_RTSLATIL_					0	0	0		ENST00000477741.5_1_20:57562773-57565044:+|nuORF;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;ENSG00000101158|ENST00000652272|NELFCD;nc|ENSG00000101158|Q8IXH7|NELFCD	ENST00000477741.5_1_20:57562773-57565044:+|nuORF	ENST00000477741.5_1_20:57562773-57565044:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2634582519531	2	437.77146	873.528367	-1.8985	-0.00083111	2.218	0.00097098	0.3195	0.00013987	437.7722581247992	38.759	0.85196	38.759	38.338	39.19	0					26	20	2	0	0	0	0.4196	1	2388	2388		6.3127	0	1	36799			52121	1901	34881	34894	58854	58854					0.08654375277149029
RTSLTDIWSY	10	Unmodified	_RTSLTDIWSY_					0	0	0			REV__ENSG00000103534|ENST00000542583|TMC5	REV__ENSG00000103534|ENST00000542583|TMC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3130493164062	2	621.311677	1240.6088	-0.2911	-0.00018087	3.7441	0.0023263	3.453	0.0021454	621.3138090299801	68.828	0.73877	68.854	68.562	69.301	0.02636					77	31	4	0	0	0	0.73395	1	6521	6521		42.864	5.0528	1	456890	+		52122	17418	34882	34895	58855	58855					-0.0018780819048060948
RTSLTDIWSY	10	Unmodified	_RTSLTDIWSY_					0	0	0			REV__ENSG00000103534|ENST00000542583|TMC5	REV__ENSG00000103534|ENST00000542583|TMC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3130493164062	2	621.311677	1240.6088	-0.62332	-0.00038727	4.0504	0.0025166	3.4271	0.0021293	621.3140085474115	68.614	0.80863	68.647	68.364	69.173	0.033005					72	32	3	0	0	0	0.80179	1	6572	6572		39.253	2.0937	1	488350	+		52123	17418	34882	34895	58856	58856					-0.0018780819048060948
RTSLTDIWSY	10	Unmodified	_RTSLTDIWSY_					0	0	0			REV__ENSG00000103534|ENST00000542583|TMC5	REV__ENSG00000103534|ENST00000542583|TMC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3109741210938	2	621.311677	1240.6088	0.63124	0.00039219	2.5401	0.0015782	3.1713	0.0019704	621.3133786370522	68.643	0.50154	68.772	68.523	69.024	0.12838					30	18	3	0	0	0	0.70553	1	6171	6171		44.377	11.565	1	159260	+		52124	17418	34882	34895	58857	58857					-0.0018780819048060948
RTSLTRPSA	9	Unmodified	_RTSLTRPSA_					0	0	0			REV__ENSG00000067900|ENST00000399799|ROCK1	REV__ENSG00000067900|ENST00000399799|ROCK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7796630859375	2	494.780348	987.546142	0.77018	0.00038107	-1.1499	-0.00056896	-0.37974	-0.00018789	494.77966004867045	84.042	2.7013	83.973	82.365	85.067	-0.069313					89	62	2	0	0	0	0.7932	1	8569	8569		20.947	0	1	283830	+		52125	16549	34883	34896	58858	58858					0.051870905319901794
RTSLTRPSA	9	Unmodified	_RTSLTRPSA_					0	0	0			REV__ENSG00000067900|ENST00000399799|ROCK1	REV__ENSG00000067900|ENST00000399799|ROCK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7801208496094	2	494.780348	987.546142	1.0619	0.0005254	-1.0199	-0.00050462	0.042	2.0781E-05	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.69624	2	8784	8784;8936		40.778	6.6056	1	657500	+		52126	16549	34883	34896	58859;58860	58859					0.051870905319901794
RTSLTRPSA	9	Unmodified	_RTSLTRPSA_					0	0	0			REV__ENSG00000067900|ENST00000399799|ROCK1	REV__ENSG00000067900|ENST00000399799|ROCK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7803039550781	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.69624	1	8557	8557		40.778	1.972	1	569520	+		52127	16549	34883	34896	58861	58861					0.051870905319901794
RTSLVGRPT	9	Unmodified	_RTSLVGRPT_					0	0	0			REV__ENSG00000131773|ENST00000355849|KHDRBS3	REV__ENSG00000131773|ENST00000355849|KHDRBS3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.79229736328125	2	493.790715	985.566878	-1.0082	-0.00049786	3.7128	0.0018333	2.7045	0.0013355	493.79239689427686	91.796	2.3688	92.259	91.807	94.176	0.46249					119	55	4	0	0	0	0.78124	1	11017	11017		30.318	1.1682	1	3049900	+		52128	18964	34884	34897	58862	58862					0.07351680911654057
RTSPDRRPPP	10	Unmodified	_RTSPDRRPPP_					0	0	0			REV__ENSG00000126705|ENST00000673934|AHDC1	REV__ENSG00000126705|ENST00000673934|AHDC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3430786132812	2	589.823078	1177.6316	2.6683	0.0015738	-3.2041	-0.0018898	-0.53579	-0.00031602	589.8209908175816	96.447	1.6237	96.391	95.307	96.931	-0.056381					61	37	2	0	0	0	0.37624	1	10290	10290		47.657	6.2307	1	92096	+		52129	18709	34885	34898	58863	58863					0.049892557176463015
RTSQLVLSK	9	Unmodified	_RTSQLVLSK_					0	0	0			REV__ENST00000423538.6_1_1:156180712-156180916:+|nuORF	REV__ENST00000423538.6_1_1:156180712-156180916:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.314208984375	2	516.314023	1030.61349	0.089356	4.6136E-05	-0.57098	-0.0002948	-0.48162	-0.00024867	516.3137718965367	32.101	1.1163	32.227	31.561	32.677	0.12643					73	25	4	0	0	0	0.7932	1	2186	2186		26.693	2.4902	1	530640	+		52130	26509	34886	34899	58864	58864					0.09941120742928433
RTSTSTLLH	9	Unmodified	_RTSTSTLLH_					0	0	0		nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L;ENST00000489076.1_1_1:154227743-154229994:+|nuORF	nc|ENSG00000143569|Q14157-4|UBAP2L	nc|ENSG00000143569|Q14157-4|UBAP2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2796630859375	2	508.28018	1014.54581	2.9959	0.0015228	-3.3701	-0.001713	-0.37419	-0.00019019	508.27837945353787	26.338	1.1095	25.998	25.616	26.725	-0.34035					74	24	5	0	0	0	0.31972	1	1441	1441		63.306	5.495	1	2006400			52131	4646	34887	34900	58865	58865					0.03911670812135526
RTSVSVII	8	Unmodified	_RTSVSVII_					0	0	0		ENSG00000172209|ENST00000304402|GPR22	ENSG00000172209|ENST00000304402|GPR22	ENSG00000172209|ENST00000304402|GPR22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7712707519531	2	437.77146	873.528367	-1.5858	-0.00069423	1.3768	0.00060274	-0.20899	-9.1491E-05	437.77200270373476	39.973	1.5307	39.98	39.296	40.827	0.0065002					71	45	3	0	0	0	0.86288	1	2517	2517		26.796	3.7536	1	3015800			52132	6752	34888	34901	58866	58866					0.08654375277149029
RTSVSVII	8	Unmodified	_RTSVSVII_					0	0	0		ENSG00000172209|ENST00000304402|GPR22	ENSG00000172209|ENST00000304402|GPR22	ENSG00000172209|ENST00000304402|GPR22	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2632751464844	2	437.77146	873.528367	-0.011439	-5.0077E-06	-0.092968	-4.0699E-05	-0.10441	-4.5707E-05	437.77142982991467	37.362	1.1234	37.302	36.463	37.586	-0.060333					46	31	2	0	0	0	0.4196	1	2016	2016		29.15	4.9468	1	192090			52133	6752	34888	34901	58867	58867					0.08654375277149029
RTSVTDFILL	10	Unmodified	_RTSVTDFILL_					0	0	0		ENSG00000185821|ENST00000328314|OR6C76	ENSG00000185821|ENST00000328314|OR6C76	ENSG00000185821|ENST00000328314|OR6C76	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.8333129882812	2	582.834788	1163.65502	-1.3452	-0.00078404	-2.3068	-0.0013445	-3.6521	-0.0021286	582.8334573704366	94.259	3.5437	94.457	93.113	96.657	0.19827					191	84	3	0	0	0	0.74274	1	9511	9511		42.396	1.8235	1	775360			52134	7744	34889	34902	58868	58868					0.07974256711622729
RTSWAARL	8	Unmodified	_RTSWAARL_					0	0	0			REV__ENST00000558362.5_1_15:45670204-45670582:-|nuORF	REV__ENST00000558362.5_1_15:45670204-45670582:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.7711486816406	2	480.772326	959.530098	-1.1927	-0.00057344	-0.48826	-0.00023474	-1.681	-0.00080818	480.7719026747457	41.087	0.70248	41.046	40.786	41.489	-0.04081					37	19	3	0	0	0	0.93786	1	3071	3071		53.351	0	1	473220	+		52135	28733	34890	34903	58869	58869					0.04871429085733325
RTSWRFRIYRK	11	Unmodified	_RTSWRFRIYRK_					0	0	0		ENST00000561920.5_1_16:70162832-70170105:+|nuORF	ENST00000561920.5_1_16:70162832-70170105:+|nuORF	ENST00000561920.5_1_16:70162832-70170105:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.6345825195312	3	523.635542	1567.8848	0.080577	4.2193E-05	-1.9644	-0.0010286	-1.8838	-0.00098644	523.6344818031575	45.362	1.5324	45.358	44.881	46.413	-0.0041618					112	35	6	0	0	0	0.81219	1	3669	3669		8.7993	0.39205	1	2358800			52136	13843	34891	34904	58870	58870					0.12357108167907427
RTTEKIVHDF	10	Unmodified	_RTTEKIVHDF_					0	0	0			REV__ENSG00000109919|ENST00000302503|MTCH2	REV__ENSG00000109919|ENST00000302503|MTCH2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.9252014160156	3	415.891055	1244.65134	-0.074612	-3.103E-05	1.8162	0.00075535	1.7416	0.00072432	416.22564091623724	28.45	0.11428	28.353	28.261	28.375	-0.096947					4	2	2	0	0	0	0.37624	1	1715	1715		17.833	5.9008	1	18846	+		52137	17780	34892	34905	58871	58871					0.03879586937750901
RTTFSLSI	8	Unmodified	_RTTFSLSI_					0	0	0			REV__ENST00000582754.5_1_17:39081604-39092927:-|nuORF	REV__ENST00000582754.5_1_17:39081604-39092927:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	462.7595520019531	2	462.761092	923.507631	0.2907	0.00013453	-0.51937	-0.00024035	-0.22867	-0.00010582	462.76073625243316	48.049	0.47787	48.087	47.85	48.328	0.037731					23	13	2	0	0	0	0.91977	1	3648	3648		45.952	5.1738	1	137550	+	+	52138	16030	34893	34906	58872	58872					0.042817848974891604
RTTFSLSI	8	Unmodified	_RTTFSLSI_					0	0	0			REV__ENST00000582754.5_1_17:39081604-39092927:-|nuORF	REV__ENST00000582754.5_1_17:39081604-39092927:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	462.761092	923.507631	-0.3156	-0.00014605	0.22642	0.00010478	-0.089183	-4.127E-05	462.7611746148927	48.017	0.55741	47.923	47.737	48.295	-0.093178	-0.081582	0.00031854	NaN	45.952	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132120	+	+	52139	16030	34893	34906							0.042817848974891604
RTTIAKDKV	9	Unmodified	_RTTIAKDKV_					0	0	0			REV__ENST00000532980.3_1_11:59055317-59056556:-|nuORF	REV__ENST00000532980.3_1_11:59055317-59056556:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3131103515625	2	516.314023	1030.61349	0.81851	0.00042261	-1.8233	-0.00094142	-1.0048	-0.00051881	516.3129871621883	113.88	0.14615	113.94	113.86	114.01	0.063232					9	5	3	0	0	0	0.73802	1	12198	12198		37.812	11.119	1	3152700	+		52140	28334	34894	34907	58873	58873					0.09941120742928433
RTTIAKDKV	9	Unmodified	_RTTIAKDKV_					0	0	0			REV__ENST00000532980.3_1_11:59055317-59056556:-|nuORF	REV__ENST00000532980.3_1_11:59055317-59056556:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	516.314023	1030.61349	0.81851	0.00042261	-1.8233	-0.00094142	-1.0048	-0.00051881	516.3129871621883	113.88	0.14615	113.94	113.86	114.01	0.063232	-0.034083	0.00031143	NaN	37.812	9	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3152700	+		52141	28334	34894	34907							0.09941120742928433
RTTQERPTL	9	Unmodified	_RTTQERPTL_					0	0	0			REV__ENST00000609974.1_1_7:155088903-155089176:-|nuORF	REV__ENST00000609974.1_1_7:155088903-155089176:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.2467041015625	2	551.304187	1100.59382	-0.32134	-0.00017716	3.8353	0.0021144	3.514	0.0019373	551.3061909261969	53.199	0.37204	53.814	53.572	53.944	0.61436					14	8	2	0	0	0	0.20789	1	5368	5368		27.882	0	1	225600	+		52142	29423	34895	34908	58874	58874					0.047547447321903746
RTTTVIGVSK	10	Unmodified	_RTTTVIGVSK_					0	0	0			REV__nc|ENSG00000162551|P05186-2|ALPL	REV__nc|ENSG00000162551|P05186-2|ALPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.3184204101562	2	531.319306	1060.62406	1.2436	0.00066073	-1.246	-0.000662	-0.0023897	-1.2697E-06	531.3184005268905	94.973	2.3333	95.019	94.535	96.868	0.046173					183	54	5	0	0	0	0.70553	1	10160	10160		44.377	3.599	1	4128600	+		52143	20820	34896	34909	58875	58875					0.0961710339736328
RTVAVKMLKEG	11	Unmodified	_RTVAVKMLKEG_					0	0	0		ENSG00000128052|ENST00000263923|KDR;nc|ENSG00000102755|P17948-5|FLT1;ENSG00000102755|ENST00000282397|FLT1	ENSG00000128052|ENST00000263923|KDR	ENSG00000128052|ENST00000263923|KDR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	411.2440185546875	3	411.244552	1230.71183	-0.18596	-7.6474E-05	-2.2855	-0.00093991	-2.4715	-0.0010164	411.243465393648	103.16	0.60635	103.17	102.88	103.48	0.0082016					22	14	2	0	0	0	0.72892	1	11077	11077		26.75	4.1881	1	441640			52144	3529	34897	34910	58876	58876					0.10569980996478989
RTVKRYVR	8	Unmodified	_RTVKRYVR_					0	0	0		ENSG00000139835|ENST00000375431|GRTP1;nc|ENSG00000139835|Q5TC63-3|GRTP1	ENSG00000139835|ENST00000375431|GRTP1	ENSG00000139835|ENST00000375431|GRTP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.33544921875	2	539.335624	1076.6567	0.91929	0.00049581	-1.1628	-0.00062714	-0.2435	-0.00013133	539.3347741661414	16.907	0.23413	16.984	16.883	17.117	0.07715					15	9	2	0	0	0	0.89494	1	151	151		37.159	2.9866	1	57907			52145	4400	34898	34911	58877	58877					0.12143355310877268
RTVLISSV	8	Unmodified	_RTVLISSV_					0	0	0			REV__ENSG00000100156|ENST00000681075|SLC16A8	REV__ENSG00000100156|ENST00000681075|SLC16A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7711486816406	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.79929	2	2172	2172;2300		18.324	2.6826	1	1151500	+		52146	17145	34899	34912	58878;58879	58878					0.0865437527713766
RTVLISSV	8	Unmodified	_RTVLISSV_					0	0	0			REV__ENSG00000100156|ENST00000681075|SLC16A8	REV__ENSG00000100156|ENST00000681075|SLC16A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77142333984375	2	437.77146	873.528367	-0.10723	-4.6943E-05	-0.31102	-0.00013615	-0.41825	-0.0001831	437.7713100510169	39.948	1.5972	39.9	38.972	40.569	-0.04789					99	48	4	0	0	0	0.79929	1	2481	2481		18.324	0.95945	1	3032300	+		52147	17145	34899	34912	58880	58880					0.0865437527713766
RTVLISSV	8	Unmodified	_RTVLISSV_					0	0	0			REV__ENSG00000100156|ENST00000681075|SLC16A8	REV__ENSG00000100156|ENST00000681075|SLC16A8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7713317871094	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.80706	3	2923	2887;2923;2935		24.203	2.8868	1	9763800	+		52148	17145	34899	34912	58881;58882;58883	58882					0.0865437527713766
RTVLISSV	8	Unmodified	_RTVLISSV_					0	0	0			REV__ENSG00000100156|ENST00000681075|SLC16A8	REV__ENSG00000100156|ENST00000681075|SLC16A8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713623046875	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.80706	2	2875	2875;2959		24.203	3.7182	1	13476000	+		52149	17145	34899	34912	58884;58885	58884					0.0865437527713766
RTVLSLLFAFV	11	Unmodified	_RTVLSLLFAFV_					0	0	0			REV__ENSG00000066230|ENST00000264938|SLC9A3	REV__ENSG00000066230|ENST00000264938|SLC9A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.9285888671875	3	422.592058	1264.75434	1.8674	0.00078915	0.61077	0.00025811	2.4782	0.0010473	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.78683	1	4911	4911		14.086	3.9821	1	997830	+		52150	16519	34900	34913	58886	58886					0.13255699396358978
RTVSFQNTR	9	Unmodified	_RTVSFQNTR_					0	0	0			REV__ENSG00000125991|ENST00000348547|ERGIC3	REV__ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.796630859375	2	554.796529	1107.5785	-0.23484	-0.00013029	0.43375	0.00024064	0.1989	0.00011035	554.796558209616	26.745	0.66422	26.786	26.47	27.134	0.040833					48	20	4	0	0	0	0.6204	1	1138	1138		45.972	3.108	1	214690	+		52151	18688	34901	34914	58887	58887					0.029018779349826218
RTVSFQNTR	9	Unmodified	_RTVSFQNTR_					0	0	0			REV__ENSG00000125991|ENST00000348547|ERGIC3	REV__ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.797119140625	2	554.796529	1107.5785	0.2334	0.00012949	-0.25519	-0.00014158	-0.021788	-1.2088E-05	554.7962668415221	26.797	1.0384	26.759	26.435	27.473	-0.038523					39	24	2	0	0	0	0.6204	1	1256	1256		45.972	1.5951	1	326390	+		52152	18688	34901	34914	58888	58888					0.029018779349826218
RTVVVFKLTH	10	Unmodified	_RTVVVFKLTH_					0	0	0			REV__ENST00000430644.5_1_4:728709-759864:+|nuORF	REV__ENST00000430644.5_1_4:728709-759864:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.58050537109375	3	400.580152	1198.71863	-0.13625	-5.4579E-05	0.80761	0.00032351	0.67136	0.00026894	400.5803754100224	20.669	0.84843	20.039	19.673	20.521	-0.6296					51	20	4	0	0	0	0.71918	1	697	697		43.651	3.5926	1	284940	+		52153	22779	34902	34915	58889	58889					0.1272166193934936
RTWILHLKVRL	11	Unmodified	_RTWILHLKVRL_					0	0	0			REV__ENST00000293362.7_1_17:40990986-40991166:+|nuORF	REV__ENST00000293362.7_1_17:40990986-40991166:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.30859375	3	478.973384	1433.89832	-1.5808	-0.00075714	4.0254	0.0019281	2.4447	0.0011709	478.9752399041666	51.639	1.4994	51.639	50.814	52.314	0					68	39	2	0	0	0	0.78083	1	4120	4120		15.337	1.2515	1	107410	+		52154	24685	34903	34916	58890	58890					0.19872965947138255
RTWLTRKIRLF	11	Unmodified	_RTWLTRKIRLF_					0	0	0		ENST00000607357.1_1_2:241070314-241070392:-|nuORF	ENST00000607357.1_1_2:241070314-241070392:-|nuORF	ENST00000607357.1_1_2:241070314-241070392:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2847595214844	3	497.308655	1488.90414	-2.8118	-0.0013983	3.851	0.0019151	1.0392	0.00051682	497.3105151132021	41.042	0.94011	41.434	41.202	42.142	0.39209					47	25	2	0	0	0	0.18164	1	3669	3669		10.587	1.375	1	2363100			52155	14461	34904	34917	58891	58891					0.17924064458816247
RVAAAAGPK	9	Unmodified	_RVAAAAGPK_					0	0	0		ENST00000296603.4_1_5:36151683-36151785:-|nuORF	ENST00000296603.4_1_5:36151683-36151785:-|nuORF	ENST00000296603.4_1_5:36151683-36151785:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.75439453125	2	420.756144	839.497735	-1.8952	-0.0007974	-0.59321	-0.0002496	-2.4884	-0.001047	420.75579416819653	20.848	1.2575	20.894	19.905	21.163	0.045401					83	61	2	0	0	0	0.78536	1	508	508		29.15	8.6677	1	128270			52156	9745	34905	34918	58892	58892					0.07156641682740883
RVAAAAGPK	9	Unmodified	_RVAAAAGPK_					0	0	0		ENST00000296603.4_1_5:36151683-36151785:-|nuORF	ENST00000296603.4_1_5:36151683-36151785:-|nuORF	ENST00000296603.4_1_5:36151683-36151785:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	420.756144	839.497735	0.50279	0.00021155	-2.8874	-0.0012149	-2.3846	-0.0010033	420.754847228136	20.716	1.1231	20.695	19.83	20.953	-0.020922	-0.13174	-0.00045526	NaN	29.15	79	56	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122120			52157	9745	34905	34918							0.07156641682740883
RVAAAQALGG	10	Unmodified	_RVAAAQALGG_					0	0	0			REV__ENST00000396912.1_1_7:5085626-5085824:+|nuORF	REV__ENST00000396912.1_1_7:5085626-5085824:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2637023925781	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.86589	1	7487	7487		29.15	3.6994	1	1329900	+		52158	26150	34906	34919	58893	58893					0.054357228488470355
RVAAAQALGG	10	Unmodified	_RVAAAQALGG_					0	0	0			REV__ENST00000396912.1_1_7:5085626-5085824:+|nuORF	REV__ENST00000396912.1_1_7:5085626-5085824:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2633361816406	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.86589	1	7476	7476		29.15	0	1	1032000	+		52159	26150	34906	34919	58894	58894					0.054357228488470355
RVAAAQALGG	10	Unmodified	_RVAAAQALGG_					0	0	0			REV__ENST00000396912.1_1_7:5085626-5085824:+|nuORF	REV__ENST00000396912.1_1_7:5085626-5085824:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26397705078125	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.85934	1	7925	7925		35.618	2.8059	1	4061400	+		52160	26150	34906	34919	58895	58895					0.054357228488470355
RVAAFPDLL	9	Unmodified	_RVAAFPDLL_					0	0	0			REV__nc|ENSG00000164818|Q86Y56-2|DNAAF5	REV__nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29058837890625	2	501.292559	1000.57057	-0.064942	-3.2555E-05	-4.2261	-0.0021185	-4.291	-0.002151	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.77546	1	8340	8340		31.955	0.42505	1	2854100	+		52161	21118	34907	34920	58896	58896					0.07030350685522535
RVAAFPDLL	9	Unmodified	_RVAAFPDLL_					0	0	0			REV__nc|ENSG00000164818|Q86Y56-2|DNAAF5	REV__nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2904968261719	2	501.292559	1000.57057	-1.5697	-0.00078686	-2.6476	-0.0013272	-4.2173	-0.0021141	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.76764	1	8409	8409		34.173	6.2903	1	9242300	+		52162	21118	34907	34920	58897	58897					0.07030350685522535
RVAAFPDLL	9	Unmodified	_RVAAFPDLL_					0	0	0			REV__nc|ENSG00000164818|Q86Y56-2|DNAAF5	REV__nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29388427734375	2	501.292559	1000.57057	-0.86867	-0.00043546	-3.0512	-0.0015296	-3.9199	-0.001965	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.78536	1	9839	9839		29.15	0	1	2445400	+		52163	21118	34907	34920	58898	58898					0.07030350685522535
RVAAKVAASA	10	Unmodified	_RVAAKVAASA_					0	0	0			REV__ENST00000548184.1_1_12:57674304-57677729:-|nuORF	REV__ENST00000548184.1_1_12:57674304-57677729:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2874450683594	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.8545	1	10100	10100		36.447	4.9169	1	50946000	+		52164	28564	34908	34921	58899	58899					0.08748582399982752
RVAAKVAASA	10	Unmodified	_RVAAKVAASA_					0	0	0			REV__ENST00000548184.1_1_12:57674304-57677729:-|nuORF	REV__ENST00000548184.1_1_12:57674304-57677729:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2877502441406	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.86348	1	10133	10133		31.53	4.7337	1	48696000	+		52165	28564	34908	34921	58900	58900					0.08748582399982752
RVAAKVAASA	10	Unmodified	_RVAAKVAASA_					0	0	0			REV__ENST00000548184.1_1_12:57674304-57677729:-|nuORF	REV__ENST00000548184.1_1_12:57674304-57677729:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.28814697265625	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.86348	1	11630	11630		31.53	4.7337	1	24731000	+		52166	28564	34908	34921	58901	58901					0.08748582399982752
RVAALRVK	8	Unmodified	_RVAALRVK_					0	0	0			REV__nc|ENSG00000114098|Q8IUR7-7|ARMC8	REV__nc|ENSG00000114098|Q8IUR7-7|ARMC8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7930603027344	2	456.808711	911.602869	0.40006	0.00018275	-0.47428	-0.00021665	-0.074214	-3.3902E-05	456.80842161444104	37.43	0.23607	37.915	37.789	38.025	0.48581					6	5	2	0	0	0	0.4196	1	3032	3032		24.203	10.427	1	35631	+		52167	18029	34909	34922	58902	58902					0.1435318287916516
RVAALVQAF	9	Unmodified	_RVAALVQAF_					0	0	0			REV__ENSG00000198355|ENST00000360612|PIM3	REV__ENSG00000198355|ENST00000360612|PIM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.791015625	2	487.792727	973.5709	-1.3135	-0.00064074	-3.0168	-0.0014716	-4.3304	-0.0021123	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.7932	2	8384	8384;8684		24.203	4.8428	1	2239000	+		52168	23318	34910	34923	58903;58904	58903					0.0830577040536582
RVAAVLTAR	9	Unmodified	_RVAAVLTAR_					0	0	0			REV__ENST00000326793.10_2_3:195163653-195163800:-|nuORF	REV__ENST00000326793.10_2_3:195163653-195163800:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8060607910156	2	478.803626	955.592698	-0.025303	-1.2115E-05	4.3741	0.0020944	4.3488	0.0020822	478.80566496431277	41.493	1.1693	41.447	40.834	42.003	-0.045471					50	34	2	0	0	0	0.7932	1	2691	2691		24.519	4.5224	1	322860	+		52169	25082	34911	34924	58905	58905					0.11312575153931448
RVACHLVG	8	Unmodified	_RVACHLVG_					0	0	0			REV__ENSG00000205090|ENST00000378733|TMEM240	REV__ENSG00000205090|ENST00000378733|TMEM240	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3028564453125	2	427.736897	853.459241	-0.080671	-3.4506E-05	-4.0196	-0.0017193	-4.1003	-0.0017538	427.7345884067131	80.395	0.16904	80.817	80.679	80.848	0.4215					5	3	2	0	0	0	0.4196	1	9216	9216		28.254	6.5519	1	42486	+		52170	23540	34912	34925	58906	58906					0.02665012776583353
RVADIPIKPW	10	Unmodified	_RVADIPIKPW_					0	0	0		ENST00000559179.1_2_15:31362232-31362271:-|nuORF	ENST00000559179.1_2_15:31362232-31362271:-|nuORF	ENST00000559179.1_2_15:31362232-31362271:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8560791015625	2	597.853316	1193.69208	0.93582	0.00055948	3.9067	0.0023357	4.8426	0.0028951	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.86348	1	9391	9391		31.53	5.9558	1	2638300			52171	13805	34913	34926	58907	58907					0.10297973048045606
RVADIPIKPW	10	Unmodified	_RVADIPIKPW_					0	0	0		ENST00000559179.1_2_15:31362232-31362271:-|nuORF	ENST00000559179.1_2_15:31362232-31362271:-|nuORF	ENST00000559179.1_2_15:31362232-31362271:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8557739257812	2	597.853316	1193.69208	0.82161	0.0004912	4.0289	0.0024087	4.8505	0.0028999	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.8608	1	9291	9291		34.173	0	1	2486400			52172	13805	34913	34926	58908	58908					0.10297973048045606
RVAEAEDF	8	Unmodified	_RVAEAEDF_					0	0	0		ENST00000297459.3_1_8:109797304-109799735:-|nuORF	ENST00000297459.3_1_8:109797304-109799735:-|nuORF	ENST00000297459.3_1_8:109797304-109799735:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.72412109375	2	468.724707	935.43486	-0.39652	-0.00018586	-2.0289	-0.000951	-2.4254	-0.0011369	468.7236452143359	94.367	1.0112	94.803	94.514	95.525	0.43539					45	25	2	0	0	0	0.85277	1	11325	11325		25.45	2.4077	1	892940			52173	9760	34914	34927	58909	58909					-0.03543968895951366
RVAEEHLGI	9	Unmodified	_RVAEEHLGI_					0	0	0		ENSG00000164877|ENST00000297508|MICALL2;nc|ENSG00000164877|Q8IY33-4|MICALL2;ENST00000472100.5_1_7:1481822-1498962:-|nuORF;nc|ENSG00000164877|Q8IY33-2|MICALL2	ENSG00000164877|ENST00000297508|MICALL2	ENSG00000164877|ENST00000297508|MICALL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.28076171875	2	512.282723	1022.55089	-0.92106	-0.00047184	-1.9464	-0.00099711	-2.8675	-0.0014689	512.2816133607977	84.69	1.8154	84.69	83.802	85.618	0					71	41	2	0	0	0	0.76255	1	7988	7988		35.618	5.1146	1	77833			52174	6014	34915	34928	58910	58910					0.0405197467475773
RVAERLVNLNV	11	Unmodified	_RVAERLVNLNV_					0	0	0			REV__ENSG00000139719|ENST00000267199|VPS33A	REV__ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.88232421875	2	641.883136	1281.75172	-0.046992	-3.0164E-05	-0.94307	-0.00060534	-0.99006	-0.0006355	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.72106	1	9907	9907		28.081	2.5074	1	2217900	+		52175	19564	34916	34929	58911	58911					0.12211243991418996
RVAERLVNLNV	11	Unmodified	_RVAERLVNLNV_					0	0	0			REV__ENSG00000139719|ENST00000267199|VPS33A	REV__ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8823852539062	2	641.883136	1281.75172	-0.050098	-3.2157E-05	-0.96956	-0.00062234	-1.0197	-0.0006545	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.638	2	10371	10276;10371		40.058	4.9061	1	3644700	+		52176	19564	34916	34929	58912;58913	58913					0.12211243991418996
RVAERLVNLNV	11	Unmodified	_RVAERLVNLNV_					0	0	0			REV__ENSG00000139719|ENST00000267199|VPS33A	REV__ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8821411132812	2	641.883136	1281.75172	1.6823	0.0010798	-2.7332	-0.0017544	-1.051	-0.00067461	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.6493	4	10362	10325;10362;10446;10458		38.754	10.672	1	3772700	+		52177	19564	34916	34929	58914;58915;58916;58917	58915					0.12211243991418996
RVAERLVNLNV	11	Unmodified	_RVAERLVNLNV_					0	0	0			REV__ENSG00000139719|ENST00000267199|VPS33A	REV__ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8818359375	2	641.883136	1281.75172	1.5936	0.0010229	-2.7804	-0.0017847	-1.1867	-0.00076174	641.8811997248309	95.576	2.5829	95.807	94.242	96.825	0.23103					208	61	4	0	0	0	0.69248	1	9774	9774		32.751	1.2207	1	2238900	+		52178	19564	34916	34929	58918	58918					0.12211243991418996
RVAERLVNLNV	11	Unmodified	_RVAERLVNLNV_					0	0	0			REV__ENSG00000139719|ENST00000267199|VPS33A	REV__ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8821411132812	2	641.883136	1281.75172	1.5974	0.0010254	-2.7094	-0.0017391	-1.112	-0.00071377	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.6493	3	10006	10006;10186;10223		38.754	10.871	1	4266200	+		52179	19564	34916	34929	58919;58920;58921	58919					0.12211243991418996
RVAERLVNLNV	11	Unmodified	_RVAERLVNLNV_					0	0	0			REV__ENSG00000139719|ENST00000267199|VPS33A	REV__ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8821411132812	2	641.883136	1281.75172	0.91411	0.00058675	-1.9967	-0.0012817	-1.0826	-0.00069492	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.638	2	10100	10100;10276		40.058	10.909	1	4136300	+		52180	19564	34916	34929	58922;58923	58922					0.12211243991418996
RVAERLVNLNV	11	Unmodified	_RVAERLVNLNV_					0	0	0			REV__ENSG00000139719|ENST00000267199|VPS33A	REV__ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.88232421875	2	641.883136	1281.75172	-1.1528	-0.00073997	0.04656	2.9886E-05	-1.1063	-0.00071008	641.8829970841505	95.709	2.5048	95.911	94.329	96.834	0.20242					216	59	5	0	0	0	0.6493	1	9852	9852		38.754	7.2238	1	1922900	+		52181	19564	34916	34929	58924	58924					0.12211243991418996
RVAERLVNLNV	11	Unmodified	_RVAERLVNLNV_					0	0	0			REV__ENSG00000139719|ENST00000267199|VPS33A	REV__ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8821411132812	2	641.883136	1281.75172	-1.1529	-0.00074004	0.033515	2.1513E-05	-1.1194	-0.00071853	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.69248	4	9975	9975;9987;10011;10024		32.751	8.2313	1	3521600	+		52182	19564	34916	34929	58925;58926;58927;58928	58925					0.12211243991418996
RVAERLVNLNV	11	Unmodified	_RVAERLVNLNV_					0	0	0			REV__ENSG00000139719|ENST00000267199|VPS33A	REV__ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8822021484375	2	641.883136	1281.75172	1.4722	0.00094496	-2.5524	-0.0016383	-1.0802	-0.00069336	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.68532	1	11801	11801		33.922	4.7516	1	4511200	+		52183	19564	34916	34929	58929	58929					0.12211243991418996
RVAERLVNLNV	11	Unmodified	_RVAERLVNLNV_					0	0	0			REV__ENSG00000139719|ENST00000267199|VPS33A	REV__ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.882568359375	2	641.883136	1281.75172	2.6248	0.0016848	-3.6695	-0.0023554	-1.0447	-0.00067061	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.62614	2	11727	11727;11883		41.427	8.6761	1	4455800	+		52184	19564	34916	34929	58930;58931	58930					0.12211243991418996
RVAERRGLG	9	Unmodified	_RVAERRGLG_					0	0	0			REV__chr12:18143293-18197336|19|33.89|0.0|21.69|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|117	REV__chr12:18143293-18197336|19|33.89|0.0|21.69|-|2|TE_info:HERVH-int,HERVH-int_dup4536,ERV1,LTR,donor,+,18197336,18203231|RERGL,None|117	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.30877685546875	2	507.301781	1012.58901	0.35003	0.00017757	1.9471	0.00098774	2.2971	0.0011653	507.30244671658306	49.771	0.19571	49.813	49.725	49.921	0.042236					6	4	2	0	0	0	0.20789	1	3869	3869		15.642	0	1	74867	+		52185	15520	34917	34930	58932	58932					0.0832190538010309
RVAFGISVAV	10	Unmodified	_RVAFGISVAV_					0	0	0			REV__ENST00000588167.1_1_18:12009921-12028151:+|nuORF	REV__ENST00000588167.1_1_18:12009921-12028151:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8037109375	2	509.805834	1017.59712	-0.054506	-2.7787E-05	-4.0835	-0.0020818	-4.1381	-0.0021096	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.86218	1	8435	8435		32.812	6.1195	1	828920	+		52186	19680	34918	34931	58933	58933					0.08902039576855714
RVAFGISVAV	10	Unmodified	_RVAFGISVAV_					0	0	0			REV__ENST00000588167.1_1_18:12009921-12028151:+|nuORF	REV__ENST00000588167.1_1_18:12009921-12028151:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.80364990234375	2	509.805834	1017.59712	-0.37726	-0.00019233	-3.8339	-0.0019545	-4.2111	-0.0021469	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.8608	1	8386	8386		34.173	1.3601	1	3415500	+		52187	19680	34918	34931	58934	58934					0.08902039576855714
RVAGALQAQV	10	Unmodified	_RVAGALQAQV_					0	0	0		ENSG00000261739|ENST00000562295|GOLGA8S;nc|ENSG00000290359|Q0D2H9|GOLGA8DP;nc|ENSG00000181984|A6NN73|GOLGA8CP;nc|ENSG00000291004|A6NC78|GOLGA8IP;ENST00000446144.2_1_15:20773467-20778061:+|nuORF	ENSG00000261739|ENST00000562295|GOLGA8S	ENSG00000261739|ENST00000562295|GOLGA8S	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8007507324219	2	506.79854	1011.58253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.715	1	43.658	43.158	44.158	-0.056999								0	0	0	0.45132	1	3030	3030		27.882	3.6795	1				52188	8928	34919	34932	58935	58935					0.0771996742871579
RVAGELQSQVK	11	Unmodified	_RVAGELQSQVK_					0	0	0		ENSG00000186399|ENST00000327271|GOLGA8R;ENSG00000232653|ENST00000448387|GOLGA8N;ENSG00000206127|ENST00000509311|GOLGA8O;ENSG00000178115|ENST00000562783|GOLGA8Q;nc|ENSG00000186399|I6L899-2|GOLGA8R;nc|ENSG00000206127|A6NCC3-1|GOLGA8O	ENSG00000186399|ENST00000327271|GOLGA8R	ENSG00000186399|ENST00000327271|GOLGA8R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5649719238281	3	405.566571	1213.67788	-1.8603	-0.00075448	-2.5615	-0.0010388	-4.4218	-0.0017933	405.5653949658049	63.143	1.4987	63.257	62.721	64.22	0.11388					139	74	3	0	0	0	0.72892	1	5506	5506		26.75	1.6237	1	273590			52189	7185	34920	34933	58936	58936					0.0795927582908007
RVAGFSKPL	9	Unmodified	_RVAGFSKPL_					0	0	0		nc|ENSG00000197136|Q9H6A9-2|PCNX3	nc|ENSG00000197136|Q9H6A9-2|PCNX3	nc|ENSG00000197136|Q9H6A9-2|PCNX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7907409667969	2	487.792727	973.5709	-1.5393	-0.00075085	-2.8027	-0.0013671	-4.342	-0.002118	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.64922	1	8091	8091		44.117	5.3107	1	1760400			52190	15189	34921	34934	58937	58937					0.08305770405377189
RVAGGVITTAT	11	Unmodified	_RVAGGVITTAT_					0	0	0		ENSG00000163872|ENST00000305135|YEATS2	ENSG00000163872|ENST00000305135|YEATS2	ENSG00000163872|ENST00000305135|YEATS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.303955078125	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.69995	1	8890	8890		31.53	0	1	9288900			52191	5875	34922	34935	58938	58938					0.07224530363282611
RVAGITGIHK	10	Unmodified	_RVAGITGIHK_					0	0	0		nc|ENSG00000071909|Q8WXR4-5|MYO3B;ENST00000438642.6_1_2:171034716-171400468:+|nuORF	nc|ENSG00000071909|Q8WXR4-5|MYO3B	nc|ENSG00000071909|Q8WXR4-5|MYO3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3252563476562	2	526.322183	1050.62981	0.49555	0.00026082	4.4744	0.002355	4.97	0.0026158	526.3244353481127	63.57	1.605	63.693	63.334	64.939	0.12252					100	62	2	0	0	0	0.77314	1	5576	5576		40.778	5.6261	1	184350			52192	11754	34923	34936	58939	58939					0.10652246699669377
RVAGITGIHK	10	Unmodified	_RVAGITGIHK_					0	0	0		nc|ENSG00000071909|Q8WXR4-5|MYO3B;ENST00000438642.6_1_2:171034716-171400468:+|nuORF	nc|ENSG00000071909|Q8WXR4-5|MYO3B	nc|ENSG00000071909|Q8WXR4-5|MYO3B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	526.322183	1050.62981	-0.040197	-2.1157E-05	4.7778	0.0025147	4.7376	0.0024935	526.3245770124746	63.708	0.71472	63.707	63.272	63.987	-0.00078583	-0.080561	0.00017935	NaN	40.778	61	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84273			52193	11754	34923	34936							0.10652246699669377
RVAGITGIHK	10	Unmodified	_RVAGITGIHK_					0	0	0		nc|ENSG00000071909|Q8WXR4-5|MYO3B;ENST00000438642.6_1_2:171034716-171400468:+|nuORF	nc|ENSG00000071909|Q8WXR4-5|MYO3B	nc|ENSG00000071909|Q8WXR4-5|MYO3B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	526.322183	1050.62981	-0.35811	-0.00018848	5.3838	0.0028336	5.0257	0.0026451	526.3249247157446	64.067	0.64457	64.094	63.761	64.406	0.027138	0.30655	0.00081722	NaN	40.778	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68227			52194	11754	34923	34936							0.10652246699669377
RVAGITGIHK	10	Unmodified	_RVAGITGIHK_					0	0	0		nc|ENSG00000071909|Q8WXR4-5|MYO3B;ENST00000438642.6_1_2:171034716-171400468:+|nuORF	nc|ENSG00000071909|Q8WXR4-5|MYO3B	nc|ENSG00000071909|Q8WXR4-5|MYO3B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	526.322183	1050.62981	0.2317	0.00012195	4.0759	0.0021452	4.3076	0.0022672	526.324282025592	63.103	3.0055	63.657	61.512	64.518	0.55449	-0.13066	-0.00055952	NaN	40.778	108	72	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128140			52195	11754	34923	34936							0.10652246699669377
RVAIIVPK	8	Unmodified	_RVAIIVPK_					0	0	0			REV__nc|ENSG00000204053|P12525|MYCLP1	REV__nc|ENSG00000204053|P12525|MYCLP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7615966796875	2	448.308013	894.601472	-0.1877	-8.4148E-05	-2.5204	-0.0011299	-2.7081	-0.0012141	448.3067636111179	24.524	0.76738	24.196	23.891	24.658	-0.32825					27	16	2	0	0	0	0.4196	1	1200	1200		24.203	0	1	183560	+		52196	30156	34924	34937	58940	58940					0.1499554879040943
RVAISSRR	8	Unmodified	_RVAISSRR_					0	0	0		ENST00000307564.8_1_9:117129889-117130765:-|nuORF	ENST00000307564.8_1_9:117129889-117130765:-|nuORF	ENST00000307564.8_1_9:117129889-117130765:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7903747558594	2	472.79105	943.567546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.96	1	116.98	116.48	117.48	0.026466								0	0	0	0.30673	1	12852	12852		15.642	0	1				52197	9873	34925	34938	58941	58941					0.09350520351370051
RVAKIMVPYG	10	Unmodified	_RVAKIMVPYG_					0	0	0			REV__ENST00000466650.5_1_3:182788929-182817286:-|nuORF	REV__ENST00000466650.5_1_3:182788929-182817286:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3301391601562	2	567.328619	1132.64269	-1.2008	-0.00068122	3.7984	0.0021549	2.5976	0.0014737	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.85934	1	9208	9208		35.618	2.8059	1	5763000	+		52198	16758	34926	34939	58942	58942					0.08166941767581193
RVAKIMVPYG	10	Unmodified	_RVAKIMVPYG_					0	0	0			REV__ENST00000466650.5_1_3:182788929-182817286:-|nuORF	REV__ENST00000466650.5_1_3:182788929-182817286:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3294677734375	2	567.328619	1132.64269	1.5887	0.00090129	0.7216	0.00040939	2.3103	0.0013107	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.5766	1	9460	9460		51.335	10.557	1	5459400	+		52199	16758	34926	34939	58943	58943					0.08166941767581193
RVAKIMVPYG	10	Unmodified	_RVAKIMVPYG_					0	0	0			REV__ENST00000466650.5_1_3:182788929-182817286:-|nuORF	REV__ENST00000466650.5_1_3:182788929-182817286:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3306274414062	2	567.328619	1132.64269	0.48094	0.00027285	1.8913	0.001073	2.3723	0.0013459	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.86718	1	8886	8886		27.882	4.3595	1	6590100	+		52200	16758	34926	34939	58944	58944					0.08166941767581193
RVAKIMVPYG	10	Unmodified	_RVAKIMVPYG_					0	0	0			REV__ENST00000466650.5_1_3:182788929-182817286:-|nuORF	REV__ENST00000466650.5_1_3:182788929-182817286:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3291625976562	2	567.328619	1132.64269	0.4851	0.00027521	1.5223	0.00086364	2.0074	0.0011388	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.86452	1	9775	9775		30.504	2.6214	1	18558000	+		52201	16758	34926	34939	58945	58945					0.08166941767581193
RVAKIMVPYG	10	Unmodified	_RVAKIMVPYG_					0	0	0			REV__ENST00000466650.5_1_3:182788929-182817286:-|nuORF	REV__ENST00000466650.5_1_3:182788929-182817286:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.329833984375	2	567.328619	1132.64269	0.77491	0.00043963	1.7436	0.00098922	2.5185	0.0014288	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.85934	2	9031	9019;9031		35.618	8.571	1	6344600	+		52202	16758	34926	34939	58946;58947	58947					0.08166941767581193
RVAKKIRQLI	10	Unmodified	_RVAKKIRQLI_					0	0	0			REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.8800659179688	2	612.916781	1223.81901	-0.38769	-0.00023762	-3.3477	-0.0020518	-3.7354	-0.0022895	612.9144491600398	105.4	0.21812	105.39	105.24	105.46	-0.014809					7	4	2	0	0	0	0.37624	1	11410	11410		35.618	0	1	17639	+		52203	16940	34927	34940	58948	58948					0.21605318993033507
RVAKKQQPA	9	Unmodified	_RVAKKQQPA_					0	0	0			REV__nc|ENSG00000047849|P27816-3|MAP4	REV__nc|ENSG00000047849|P27816-3|MAP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3140869140625	2	513.314358	1024.61416	0.3202	0.00016436	3.49	0.0017915	3.8102	0.0019558	513.3159908318282	43.284	1.4208	43.257	42.839	44.259	-0.026768					81	33	4	0	0	0	0.7932	1	3371	3371		23.042	1.0826	1	394850	+		52204	29684	34928	34941	58949	58949					0.10283960182664487
RVAKRRAV	8	Unmodified	_RVAKRRAV_					0	0	0			REV__chr19:49680006-49680487|15|10.87|0.66|4.04|+|1|None,PRMT1|1	REV__chr19:49680006-49680487|15|10.87|0.66|4.04|+|1|None,PRMT1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.97430419921875	2	478.317235	954.619916	-2.7374	-0.0013094	-3.8233	-0.0018287	-6.5607	-0.0031381	478.31518757500464	42.901	0.29109	43.598	43.381	43.672	0.69754					10	6	2	0	0	0	0.4196	1	3843	3843		7.6903	0	1	108790	+		52205	15720	34929	34942	58950	58950					0.14079103484982625
RVAKSKFF	8	Unmodified	_RVAKSKFF_					0	0	0		ENST00000472077.1_1_2:27604468-27607956:-|nuORF;ENSG00000115241|ENST00000344034|PPM1G	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958984375	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.84341	3	4419	4344;4419;4483		37.159	8.5665	1	781720			52206	2824	34930	34943	58951;58952;58953	58952					0.08446074267999393
RVAKSKFF	8	Unmodified	_RVAKSKFF_					0	0	0		ENST00000472077.1_1_2:27604468-27607956:-|nuORF;ENSG00000115241|ENST00000344034|PPM1G	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958679199219	2	491.795269	981.575986	-1.7512	-0.00086123	2.5855	0.0012715	0.83426	0.00041029	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.84341	1	3941	3941		24.203	0	1	2627300			52207	2824	34930	34943	58954	58954					0.08446074267999393
RVAKSKFF	8	Unmodified	_RVAKSKFF_					0	0	0		ENST00000472077.1_1_2:27604468-27607956:-|nuORF;ENSG00000115241|ENST00000344034|PPM1G	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958068847656	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.884	2	4597	4597;4639		40.573	13.777	1	703950			52208	2824	34930	34943	58955;58956	58955					0.08446074267999393
RVAKSKFF	8	Unmodified	_RVAKSKFF_					0	0	0		ENST00000472077.1_1_2:27604468-27607956:-|nuORF;ENSG00000115241|ENST00000344034|PPM1G	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957458496094	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.86288	1	3376	3376		26.796	2.5934	1	2747400			52209	2824	34930	34943	58957	58957					0.08446074267999393
RVAKSKFF	8	Unmodified	_RVAKSKFF_					0	0	0		ENST00000472077.1_1_2:27604468-27607956:-|nuORF;ENSG00000115241|ENST00000344034|PPM1G	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79559326171875	2	491.795269	981.575986	-0.70573	-0.00034708	1.5523	0.0007634	0.84654	0.00041632	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.86791	1	4269	4269		28.254	1.4582	1	772710			52210	2824	34930	34943	58958	58958					0.08446074267999393
RVAKSKFF	8	Unmodified	_RVAKSKFF_					0	0	0		ENST00000472077.1_1_2:27604468-27607956:-|nuORF;ENSG00000115241|ENST00000344034|PPM1G	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7958068847656	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.86288	2	4252	4252;4258		26.796	2.5934	1	748320			52211	2824	34930	34943	58959;58960	58959					0.08446074267999393
RVAKSKFF	8	Unmodified	_RVAKSKFF_					0	0	0		ENST00000472077.1_1_2:27604468-27607956:-|nuORF;ENSG00000115241|ENST00000344034|PPM1G	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7961730957031	2	491.795269	981.575986	-0.41148	-0.00020237	1.3216	0.00064997	0.91013	0.0004476	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.84341	1	4305	4305		24.203	0	1	887820			52212	2824	34930	34943	58961	58961					0.08446074267999393
RVAKSKFF	8	Unmodified	_RVAKSKFF_					0	0	0		ENST00000472077.1_1_2:27604468-27607956:-|nuORF;ENSG00000115241|ENST00000344034|PPM1G	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7959289550781	2	491.795269	981.575986	-0.22794	-0.0001121	1.0719	0.00052718	0.84401	0.00041508	491.795700180553	50.73	2.2718	51.177	50.348	52.62	0.4476					135	54	3	0	0	0	0.84341	1	5011	5011		24.203	2.5004	1	1342800			52213	2824	34930	34943	58962	58962					0.08446074267999393
RVALARIL	8	Unmodified	_RVALARIL_					0	0	0			REV__nc|ENSG00000006125|P63010-3|AP2B1	REV__nc|ENSG00000006125|P63010-3|AP2B1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79315185546875	2	456.311087	910.60762	-1.0359	-0.00047268	-1.2615	-0.00057562	-2.2973	-0.0010483	456.31252081955887	37.862	0.53281	37.811	37.406	37.939	-0.050373					15	11	2	0	0	0	0.4196	1	2620	2620		26.796	13.021	1	20860	+		52214	16098	34931	34944	58963	58963					0.14874067021946757
RVALEKSFL	9	Unmodified	_RVALEKSFL_					0	0	0		nc|ENSG00000143190|P14859-4|POU2F1;nc|ENSG00000143190|P14859-5|POU2F1;nc|ENSG00000143190|P14859-3|POU2F1;nc|ENSG00000143190|P14859|POU2F1;nc|ENSG00000143190|P14859-2|POU2F1;ENSG00000143190|ENST00000367866|POU2F1	nc|ENSG00000143190|P14859-4|POU2F1	nc|ENSG00000143190|P14859-4|POU2F1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.816650390625	2	531.818941	1061.62333	-0.7527	-0.0004003	-3.1029	-0.0016502	-3.8556	-0.0020505	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.78983	1	8563	8563		27.882	1.1893	1	2790600			52215	4609	34932	34945	58964	58964					0.09498308748334239
RVALEKSFL	9	Unmodified	_RVALEKSFL_					0	0	0		nc|ENSG00000143190|P14859-4|POU2F1;nc|ENSG00000143190|P14859-5|POU2F1;nc|ENSG00000143190|P14859-3|POU2F1;nc|ENSG00000143190|P14859|POU2F1;nc|ENSG00000143190|P14859-2|POU2F1;ENSG00000143190|ENST00000367866|POU2F1	nc|ENSG00000143190|P14859-4|POU2F1	nc|ENSG00000143190|P14859-4|POU2F1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8167724609375	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.77244	1	8853	8853		32.812	1.2826	1	4022300			52216	4609	34932	34945	58965	58965					0.09498308748334239
RVALKNVDS	9	Unmodified	_RVALKNVDS_					0	0	0		ENSG00000164342|ENST00000296795|TLR3;nc|ENSG00000164342|O15455-2|TLR3	ENSG00000164342|ENST00000296795|TLR3	ENSG00000164342|ENST00000296795|TLR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2903747558594	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.76764	1	8510	8510		34.173	1.3601	1	9566900			52217	5960	34933	34946	58966	58966					0.06628261191792717
RVALKYMTPV	10	Unmodified	_RVALKYMTPV_					0	0	0		ENST00000552099.5_1_12:49165333-49167571:-|nuORF;ENST00000547260.5_1_12:49165333-49167887:-|nuORF;nc|ENSG00000174233|O43306-2|ADCY6;ENSG00000174233|ENST00000357869|ADCY6	ENST00000552099.5_1_12:49165333-49167571:-|nuORF	ENST00000552099.5_1_12:49165333-49167571:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.343017578125	2	589.341726	1176.6689	0.71715	0.00042265	1.778	0.0010479	2.4952	0.0014705	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.86218	1	10897	10897		32.812	1.2826	1	2439600			52218	6919	34934	34947	58967	58967					0.0876321093903698
RVALLLSGAEA	11	Unmodified	_RVALLLSGAEA_					0	0	0			REV__ENSG00000151779|ENST00000281513|NBAS;REV__nc|ENSG00000151779|A2RRP1-2|NBAS	REV__nc|ENSG00000151779|A2RRP1-2|NBAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3267822265625	2	550.327131	1098.63971	-1.4511	-0.00079856	1.2412	0.00068307	-0.20986	-0.00011549	550.3279242402356	100.07	1.1382	100.24	99.716	100.85	0.17199					63	25	3	0	0	0	0.72106	1	10408	10408		28.081	1.0342	1	345000	+		52219	20268;29931	34935	34948	58968	58968					0.09433389914443069
RVALLQFGGP	10	Unmodified	_RVALLQFGGP_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	529.31396484375	2	529.311284	1056.60801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.55	1	33.505	33.005	34.005	-0.045815								0	0	0	0.45132	1	1637	1637		29.15	0	1				52220	4545	34936	34949	58969	58969					0.08197441951142537
RVANAVSVK	9	Unmodified	_RVANAVSVK_					0	0	0		ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-2|CASP9;nc|ENSG00000132906|P55211-4|CASP9	ENSG00000132906|ENST00000333868|CASP9	ENSG00000132906|ENST00000333868|CASP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28759765625	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.77244	1	9820	9820		32.812	1.2826	1	50946000			52221	3838	34937	34950	58970	58970					0.0874858239999412
RVANEVTLN	9	Unmodified	_RVANEVTLN_					0	0	0		ENSG00000139329|ENST00000266718|LUM	ENSG00000139329|ENST00000266718|LUM	ENSG00000139329|ENST00000266718|LUM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2801818847656	2	508.28018	1014.54581	0.65224	0.00033152	-0.58773	-0.00029873	0.064515	3.2792E-05	508.27981408630757	88.229	2.676	88.678	87.601	90.277	0.44893					196	66	4	0	0	0	0.75725	1	10292	10292		36.447	2.5251	1	1819500			52222	4363	34938	34951	58971	58971					0.039116708121468946
RVANVPIKGSH	11	Unmodified	_RVANVPIKGSH_					0	0	0			REV__ENSG00000105085|ENST00000263390|MED26	REV__ENSG00000105085|ENST00000263390|MED26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3426513671875	2	589.343646	1176.67274	2.2135	0.0013045	-3.7891	-0.0022331	-1.5756	-0.00092856	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.7434	1	9736	9736		23.523	0	1	5579200	+		52223	17504	34939	34952	58972	58972					0.09147016757151505
RVAPEEHPTL	10	Unmodified	_RVAPEEHPTL_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.806640625	2	574.806562	1147.59857	-0.26346	-0.00015144	0.47146	0.000271	0.208	0.00011956	574.8065326924051	34.066	0.74987	34.009	33.651	34.401	-0.056385					37	16	3	0	0	0	0.51302	1	2119	2119		54.776	3.4409	1	189990			52224	2370	34940	34953	58973	58973					0.030676288749418745
RVAPEEHPVL	10	Unmodified	_RVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	573.8168334960938	2	573.81693	1145.61931	-1.3052	-0.00074896	1.4162	0.00081266	0.11101	6.37E-05	573.817608790497	36.135	0.93153	36.135	35.803	36.734	0					60	22	4	0	0	0	0.28217	4	2069	2044;2058;2069;2084		74.255	15.473	1	769810			52225	1338;8080;12043	34941	34954	58974;58975;58976;58977	58976					0.052322192545943835
RVAPEEHPVL	10	Unmodified	_RVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.8157958984375	2	573.81693	1145.61931	-0.97824	-0.00056133	0.98096	0.00056289	0.0027219	1.5618E-06	573.8173526774345	36.242	1.264	36.223	35.602	36.866	-0.018673					63	27	4	0	0	0	0.64457	2	2297	2297;2320		47.657	10.498	1	601960			52226	1338;8080;12043	34941	34954	58978;58979	58978					0.052322192545943835
RVAPEEHPVL	10	Unmodified	_RVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.816162109375	2	573.81693	1145.61931	-0.60731	-0.00034849	0.63185	0.00036256	0.024534	1.4078E-05	573.8171546436936	36.254	0.9932	36.198	35.788	36.781	-0.055904					58	21	4	0	0	0	0.30722	4	2399	2376;2399;2411;2424		71.877	24.22	1	727690			52227	1338;8080;12043	34941	34954	58980;58981;58982;58983	58981					0.052322192545943835
RVAPEEHPVL	10	Unmodified	_RVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.816650390625	2	573.81693	1145.61931	-0.77927	-0.00044716	0.57434	0.00032957	-0.20493	-0.00011759	573.8171128348157	36.202	1.1773	36.211	35.659	36.837	0.0092773					66	25	4	0	0	0	0.51302	3	2359	2324;2336;2359		54.776	8.8041	1	690830			52228	1338;8080;12043	34941	34954	58984;58985;58986	58986					0.052322192545943835
RVAPEEHPVL	10	Unmodified	_RVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.816650390625	2	573.81693	1145.61931	0.47618	0.00027324	-0.3018	-0.00017318	0.17438	0.00010006	573.8166032618375	36.182	1.0397	36.213	35.726	36.765	0.031132					71	29	3	0	0	0	0.33399	1	1973	1973		69.628	7.9363	1	967530			52229	1338;8080;12043	34941	34954	58987	58987					0.052322192545943835
RVAPEEHPVL	10	Unmodified	_RVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	573.8171997070312	2	573.81693	1145.61931	0.2907	0.00016681	-0.11062	-6.3478E-05	0.18007	0.00010333	573.816753391891	35.956	1.0187	36.059	35.47	36.489	0.10306					84	33	4	0	0	0	0.20373	3	1950	1940;1950;1958		85.161	16.315	1	933610			52230	1338;8080;12043	34941	34954	58988;58989;58990	58989					0.052322192545943835
RVAPEEHPVL	10	Unmodified	_RVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	573.8169555664062	2	573.81693	1145.61931	0.47187	0.00027077	-0.38626	-0.00022164	0.085615	4.9127E-05	573.8166375827257	36.087	1.0388	36.026	35.489	36.528	-0.060337					75	29	4	0	0	0	0.3985	3	1969	1947;1958;1969		64.207	14.766	1	912290			52231	1338;8080;12043	34941	34954	58991;58992;58993	58993					0.052322192545943835
RVAPEEHPVL	10	Unmodified	_RVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.817138671875	2	573.81693	1145.61931	0.15157	8.6975E-05	0.24039	0.00013794	0.39196	0.00022491	573.8169816791607	35.532	0.8356	35.78	35.438	36.273	0.2477					62	21	5	0	0	0	0.21786	4	2714	2704;2714;2726;2740		82.241	27.464	1	5270000			52232	1338;8080;12043	34941	34954	58994;58995;58996;58997	58995					0.052322192545943835
RVAPEEHPVL	10	Unmodified	_RVAPEEHPVL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.8169555664062	2	573.81693	1145.61931	1.3652	0.00078336	-0.98697	-0.00056634	0.37821	0.00021703	573.816236578435	35.449	1.1004	35.83	35.173	36.274	0.3812					72	28	4	0	0	0	0.033438	3	2726	2726;2739;2751		113.41	28.496	1	5532000			52233	1338;8080;12043	34941	34954	58998;58999;59000	58998					0.052322192545943835
RVAPGRDLG	9	Unmodified	_RVAPGRDLG_					0	0	0		nc|ENSG00000100968|Q14934-5|NFATC4;nc|ENSG00000100968|Q14934-4|NFATC4;nc|ENSG00000100968|Q14934-14|NFATC4	nc|ENSG00000100968|Q14934-5|NFATC4	nc|ENSG00000100968|Q14934-5|NFATC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.76910400390625	2	470.769783	939.525013	-0.46989	-0.00022121	-1.5944	-0.00075061	-2.0643	-0.00097182	470.768898093518	52.94	1.6168	52.866	52.471	54.088	-0.074509					101	42	3	0	0	0	0.67345	1	4356	4356		42.396	7.1954	1	1875900			52234	14819	34942	34955	59001	59001					0.05283125223127172
RVAPLQAQG	9	Unmodified	_RVAPLQAQG_					0	0	0			REV__ENSG00000055483|ENST00000449938|USP36	REV__ENSG00000055483|ENST00000449938|USP36	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.27191162109375	2	470.272158	938.529764	-0.95275	-0.00044805	0.77303	0.00036353	-0.17972	-8.4519E-05	470.2725133090264	92.093	2.8487	92.314	91.222	94.07	0.22157					155	67	4	0	0	0	0.76255	1	9343	9343		35.618	3.6634	1	1872200	+		52235	16412	34943	34956	59002	59002					0.05804009365908769
RVAPTAKTMAT	11	Unmodified	_RVAPTAKTMAT_					0	0	0			REV__ENSG00000213047|ENST00000620048|DENND1B	REV__ENSG00000213047|ENST00000620048|DENND1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.81640625	2	573.818615	1145.62268	-0.97824	-0.00056133	-1.9562	-0.0011225	-2.9345	-0.0016838	573.8173526774345	36.242	1.264	36.223	35.602	36.866	-0.018673					63	27	4	0	0	0	0.6493	1	2309	2309		38.754	0.94209	1	601960	+		52236	23605	34944	34957	59003	59003					0.055691460369416745
RVAPVQPSPRA	11	Unmodified	_RVAPVQPSPRA_					0	0	0			REV__nc|ENSG00000154133|Q8WZ75-2|ROBO4	REV__nc|ENSG00000154133|Q8WZ75-2|ROBO4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3426513671875	2	589.343646	1176.67274	-1.324	-0.00078029	-0.19058	-0.00011232	-1.5146	-0.00089261	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.69931	1	9148	9148		31.634	0.10446	1	5946500	+		52237	20369	34945	34958	59004	59004					0.09147016757151505
RVAPVVSVPLS	11	Unmodified	_RVAPVVSVPLS_					0	0	0		ENST00000381482.7_1_20:2126675-2127125:+|nuORF	ENST00000381482.7_1_20:2126675-2127125:+|nuORF	ENST00000381482.7_1_20:2126675-2127125:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	562.3430786132812	2	562.345323	1122.67609	-1.412	-0.00079401	-1.5512	-0.00087233	-2.9632	-0.0016663	562.3442982549859	90.512	3.3727	90.693	89.307	92.679	0.18029					187	79	3	0	0	0	0.69995	1	8989	8989		31.53	7.0106	1	509350			52238	10957	34946	34959	59005	59005					0.11966266811123205
RVAPVVSVPLS	11	Unmodified	_RVAPVVSVPLS_					0	0	0		ENST00000381482.7_1_20:2126675-2127125:+|nuORF	ENST00000381482.7_1_20:2126675-2127125:+|nuORF	ENST00000381482.7_1_20:2126675-2127125:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	562.345323	1122.67609	-0.56824	-0.00031955	-2.544	-0.0014306	-3.1123	-0.0017502	562.3437491815394	90.973	3.3356	90.973	89.472	92.808	0	0.17359	0.00068865	NaN	31.53	139	77	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	381590			52239	10957	34946	34959							0.11966266811123205
RVAPVVSVPLS	11	Unmodified	_RVAPVVSVPLS_					0	0	0		ENST00000381482.7_1_20:2126675-2127125:+|nuORF	ENST00000381482.7_1_20:2126675-2127125:+|nuORF	ENST00000381482.7_1_20:2126675-2127125:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	562.345323	1122.67609	-1.2373	-0.00069581	-1.7413	-0.00097921	-2.9786	-0.001675	562.344206256515	90.825	4.32	90.894	89.732	94.052	0.069328	0.095131	0.0015915	NaN	31.53	169	102	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	540920			52240	10957	34946	34959							0.11966266811123205
RVAPVVSVPLS	11	Unmodified	_RVAPVVSVPLS_					0	0	0		ENST00000381482.7_1_20:2126675-2127125:+|nuORF	ENST00000381482.7_1_20:2126675-2127125:+|nuORF	ENST00000381482.7_1_20:2126675-2127125:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	562.345323	1122.67609	1.5753	0.00088588	-4.2203	-0.0023732	-2.6449	-0.0014874	562.342819213322	90.461	1.7477	90.911	90.308	92.056	0.45058	0.11219	-0.0011966	NaN	31.53	106	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	590470			52241	10957	34946	34959							0.11966266811123205
RVAPVVSVPLS	11	Unmodified	_RVAPVVSVPLS_					0	0	0		ENST00000381482.7_1_20:2126675-2127125:+|nuORF	ENST00000381482.7_1_20:2126675-2127125:+|nuORF	ENST00000381482.7_1_20:2126675-2127125:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	562.345323	1122.67609	-0.9403	-0.00052877	-1.7604	-0.00098994	-2.7007	-0.0015187	562.3442857256969	90.544	2.2307	91.015	90.139	92.37	0.47068	0.2154	0.00157	NaN	31.53	129	55	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	604800			52242	10957	34946	34959							0.11966266811123205
RVAQGLTVN	9	Unmodified	_RVAQGLTVN_					0	0	0			REV__ENST00000372285.7_1_20:44751827-44756794:+|nuORF	REV__ENST00000372285.7_1_20:44751827-44756794:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2773742675781	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.76764	2	7936	7936;8179		34.173	6.1195	1	4644500	+		52243	25714	34947	34960	59006;59007	59006					0.06031992020314192
RVAQGLTVN	9	Unmodified	_RVAQGLTVN_					0	0	0			REV__ENST00000372285.7_1_20:44751827-44756794:+|nuORF	REV__ENST00000372285.7_1_20:44751827-44756794:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2774658203125	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.76764	1	8174	8174		34.173	2.6427	1	6593200	+		52244	25714	34947	34960	59008	59008					0.06031992020314192
RVAQGVHRAL	10	Unmodified	_RVAQGVHRAL_					0	0	0			REV__nc|ENSG00000070985|Q9NZQ8-2|TRPM5	REV__nc|ENSG00000070985|Q9NZQ8-2|TRPM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8296508789062	2	553.830706	1105.64686	1.198	0.00066348	-2.4064	-0.0013328	-1.2084	-0.00066928	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.86718	1	9110	9110		27.882	1.0861	1	1689700	+		52245	16619	34948	34961	59009	59009					0.09826167305527633
RVAQIAEAAS	10	Unmodified	_RVAQIAEAAS_					0	0	0			REV__nc|ENSG00000176884|Q05586-2|GRIN1	REV__nc|ENSG00000176884|Q05586-2|GRIN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2796936035156	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.70553	1	8535	8535		44.377	0.26039	1	1261800	+		52246	22149	34949	34962	59010	59010					0.03911670812135526
RVAQIAEAAS	10	Unmodified	_RVAQIAEAAS_					0	0	0			REV__nc|ENSG00000176884|Q05586-2|GRIN1	REV__nc|ENSG00000176884|Q05586-2|GRIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.27996826171875	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.44803	1	8638	8638		60.118	12.159	1	1814000	+		52247	22149	34949	34962	59011	59011					0.03911670812135526
RVAQLFLP	8	Unmodified	_RVAQLFLP_					0	0	0		ENST00000357546.6_1_2:169926121-169926220:+|nuORF	ENST00000357546.6_1_2:169926121-169926220:+|nuORF	ENST00000357546.6_1_2:169926121-169926220:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2877197265625	2	472.28982	942.565087	-0.91682	-0.000433	-3.6711	-0.0017338	-4.588	-0.0021668	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.9159	1	10178	10178		44.531	5.7249	1	50946000			52248	10388	34950	34963	59012	59012					0.09150671893701201
RVAQLKPKVKS	11	Unmodified	_RVAQLKPKVKS_					0	0	0		ENSG00000266074|ENST00000675386|BAHCC1;nc|ENSG00000266074|Q9P281|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	ENSG00000266074|ENST00000675386|BAHCC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.6039733886719	3	418.60659	1252.79794	-1.7442	-0.00073012	-2.6386	-0.0011045	-4.3828	-0.0018347	418.60537062211796	49.043	4.3192	49.043	47.911	52.23	0					175	108	3	0	0	0	0.74771	1	3828	3828		22.562	1.5294	1	101990			52249	8950	34951	34964	59013	59013					0.18165308893503607
RVAQYVKRN	9	Unmodified	_RVAQYVKRN_					0	0	0			REV__ENSG00000140030|ENST00000267549|GPR65	REV__ENSG00000140030|ENST00000267549|GPR65	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.330078125	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.78058	1	10824	10824		30.504	2.6214	1	6182600	+		52250	19594	34952	34965	59014	59014					0.0855074758567298
RVARELDV	8	Unmodified	_RVARELDV_					0	0	0		nc|ENSG00000158163|Q8IYY4-2|DZIP1L;ENSG00000158163|ENST00000327532|DZIP1L	nc|ENSG00000158163|Q8IYY4-2|DZIP1L	nc|ENSG00000158163|Q8IYY4-2|DZIP1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27801513671875	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.89494	1	10202	10202		37.159	0	1	6350300			52251	5465	34953	34966	59015	59015					0.060319920203255606
RVARQVGG	8	Unmodified	_RVARQVGG_					0	0	0			REV__ENST00000452159.6_1_12:124114706-124118224:-|nuORF	REV__ENST00000452159.6_1_12:124114706-124118224:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7515563964844	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.902	1	77.954	77.454	78.454	0.052696								0	0	0	0.29353	1	7549	7549		28.254	1.4582	1		+		52252	26893	34954	34967	59016	59016					0.06114873397245901
RVARQVGG	8	Unmodified	_RVARQVGG_					0	0	0			REV__ENST00000452159.6_1_12:124114706-124118224:-|nuORF	REV__ENST00000452159.6_1_12:124114706-124118224:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7516784667969	2	421.751393	841.488233	-0.10002	-4.2183E-05	0.32598	0.00013748	0.22596	9.5298E-05	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.86288	2	7712	7694;7712		28.254	3.7536	1	579450	+		52253	26893	34954	34967	59017;59018	59018					0.06114873397245901
RVARQVGG	8	Unmodified	_RVARQVGG_					0	0	0			REV__ENST00000452159.6_1_12:124114706-124118224:-|nuORF	REV__ENST00000452159.6_1_12:124114706-124118224:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7513122558594	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.86791	2	7533	7533;7586		42.474	12.633	1	532850	+		52254	26893	34954	34967	59019;59020	59019					0.06114873397245901
RVARVKAR	8	Unmodified	_RVARVKAR_					0	0	0		nc|ENSG00000143147|Q8N6U8-3|GPR161;nc|ENSG00000143147|Q8N6U8-2|GPR161;nc|ENSG00000143147|Q8N6U8-5|GPR161;ENST00000493800.1_1_1:168059784-168074118:-|nuORF;nc|ENSG00000143147|Q8N6U8-4|GPR161;ENSG00000143147|ENST00000682931|GPR161;nc|ENSG00000143147|Q8N6U8-6|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.31317138671875	2	478.317235	954.619916	-1.818	-0.00086957	-4.1885	-0.0020034	-6.0065	-0.002873	478.31510795693185	35.448	1.0031	35.448	35.005	36.008	0					44	26	2	0	0	0	0.80706	2	1986	1975;1986		24.203	5.5846	1	76605			52255	4604	34955	34968	59021;59022	59022					0.14079103484982625
RVARVKAR	8	Unmodified	_RVARVKAR_					0	0	0		nc|ENSG00000143147|Q8N6U8-3|GPR161;nc|ENSG00000143147|Q8N6U8-2|GPR161;nc|ENSG00000143147|Q8N6U8-5|GPR161;ENST00000493800.1_1_1:168059784-168074118:-|nuORF;nc|ENSG00000143147|Q8N6U8-4|GPR161;ENSG00000143147|ENST00000682931|GPR161;nc|ENSG00000143147|Q8N6U8-6|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.3134460449219	2	478.317235	954.619916	-2.5669	-0.0012278	-3.8706	-0.0018514	-6.4375	-0.0030791	478.3152259458775	37.335	1.6446	37.346	36.48	38.125	0.011173					62	36	2	0	0	0	0.83058	1	2403	2403		12.959	0.75233	1	87060			52256	4604	34955	34968	59023	59023					0.14079103484982625
RVARVKAR	8	Unmodified	_RVARVKAR_					0	0	0		nc|ENSG00000143147|Q8N6U8-3|GPR161;nc|ENSG00000143147|Q8N6U8-2|GPR161;nc|ENSG00000143147|Q8N6U8-5|GPR161;ENST00000493800.1_1_1:168059784-168074118:-|nuORF;nc|ENSG00000143147|Q8N6U8-4|GPR161;ENSG00000143147|ENST00000682931|GPR161;nc|ENSG00000143147|Q8N6U8-6|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	478.317235	954.619916	-0.074425	-3.5599E-05	-6.1021	-0.0029187	-6.1765	-0.0029543	478.3140723387424	35.525	0.84965	35.513	35.17	36.02	-0.012199	0.076771	-0.001044	NaN	24.203	33	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59219			52257	4604	34955	34968							0.14079103484982625
RVARVKAR	8	Unmodified	_RVARVKAR_					0	0	0		nc|ENSG00000143147|Q8N6U8-3|GPR161;nc|ENSG00000143147|Q8N6U8-2|GPR161;nc|ENSG00000143147|Q8N6U8-5|GPR161;ENST00000493800.1_1_1:168059784-168074118:-|nuORF;nc|ENSG00000143147|Q8N6U8-4|GPR161;ENSG00000143147|ENST00000682931|GPR161;nc|ENSG00000143147|Q8N6U8-6|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	478.317235	954.619916	-0.66694	-0.00031901	-5.8436	-0.0027951	-6.5106	-0.0031141	478.3142983110929	35.547	0.8414	35.491	35.13	35.971	-0.055904	0.054694	-0.00079677	NaN	24.203	30	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70132			52258	4604	34955	34968							0.14079103484982625
RVARVKAR	8	Unmodified	_RVARVKAR_					0	0	0		nc|ENSG00000143147|Q8N6U8-3|GPR161;nc|ENSG00000143147|Q8N6U8-2|GPR161;nc|ENSG00000143147|Q8N6U8-5|GPR161;ENST00000493800.1_1_1:168059784-168074118:-|nuORF;nc|ENSG00000143147|Q8N6U8-4|GPR161;ENSG00000143147|ENST00000682931|GPR161;nc|ENSG00000143147|Q8N6U8-6|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	478.317235	954.619916	-2.1506	-0.0010287	-4.2374	-0.0020268	-6.3881	-0.0030555	478.3151548625913	35.424	0.97868	35.431	35.091	36.07	0.0063934	-0.0056803	0.00073976	NaN	24.203	40	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51011			52259	4604	34955	34968							0.14079103484982625
RVARVKAR	8	Unmodified	_RVARVKAR_					0	0	0		nc|ENSG00000143147|Q8N6U8-3|GPR161;nc|ENSG00000143147|Q8N6U8-2|GPR161;nc|ENSG00000143147|Q8N6U8-5|GPR161;ENST00000493800.1_1_1:168059784-168074118:-|nuORF;nc|ENSG00000143147|Q8N6U8-4|GPR161;ENSG00000143147|ENST00000682931|GPR161;nc|ENSG00000143147|Q8N6U8-6|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	nc|ENSG00000143147|Q8N6U8-3|GPR161	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	478.317235	954.619916	-0.93863	-0.00044896	-4.934	-0.00236	-5.8726	-0.002809	478.31466403451435	35.26	0.7792	35.299	35.123	35.902	0.038643	-0.13741	7.3435E-05	NaN	24.203	31	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37588			52260	4604	34955	34968							0.14079103484982625
RVASDSPKPAL	11	Unmodified	_RVASDSPKPAL_					0	0	0		ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.3262939453125	2	570.822212	1139.62987	-0.44856	-0.00025605	4.3073	0.0024587	3.8587	0.0022026	570.8243844075674	61.574	0.9001	61.59	61.334	62.234	0.015724					68	38	2	0	0	0	0.7342	1	5346	5346		25.574	2.0514	1	801440			52261	7635	34956	34969	59024	59024					0.06564201909031908
RVASILGQN	9	Unmodified	_RVASILGQN_					0	0	0		ENST00000434116.6_1_15:65911262-65916428:+|nuORF	ENST00000434116.6_1_15:65911262-65916428:+|nuORF	ENST00000434116.6_1_15:65911262-65916428:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27734375	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.76764	1	8178	8178		34.173	2.2177	1	2046100			52262	11693	34957	34970	59025	59025					0.06031992020336929
RVASILGQN	9	Unmodified	_RVASILGQN_					0	0	0		ENST00000434116.6_1_15:65911262-65916428:+|nuORF	ENST00000434116.6_1_15:65911262-65916428:+|nuORF	ENST00000434116.6_1_15:65911262-65916428:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2773742675781	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.76764	1	8097	8097		34.173	0	1	6441000			52263	11693	34957	34970	59026	59026					0.06031992020336929
RVASILGQN	9	Unmodified	_RVASILGQN_					0	0	0		ENST00000434116.6_1_15:65911262-65916428:+|nuORF	ENST00000434116.6_1_15:65911262-65916428:+|nuORF	ENST00000434116.6_1_15:65911262-65916428:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2774353027344	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.7932	1	9739	9739		26.693	1.1189	1	5642300			52264	11693	34957	34970	59027	59027					0.06031992020336929
RVASILGQN	9	Unmodified	_RVASILGQN_					0	0	0		ENST00000434116.6_1_15:65911262-65916428:+|nuORF	ENST00000434116.6_1_15:65911262-65916428:+|nuORF	ENST00000434116.6_1_15:65911262-65916428:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.277587890625	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.77244	1	9808	9808		32.812	2.3088	1	6350300			52265	11693	34957	34970	59028	59028					0.06031992020336929
RVASKDEH	8	Unmodified	_RVASKDEH_					0	0	0			REV__ENSG00000087301|ENST00000281741|TXNDC16	REV__ENSG00000087301|ENST00000281741|TXNDC16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	471.2425537109375	2	471.243598	940.472643	0.64062	0.00030189	-0.3352	-0.00015796	0.30542	0.00014393	471.2433603925791	85.886	4.3657	86.035	83.833	88.198	0.14884					167	101	2	0	0	0	0.88601	1	8400	8400		34.173	0	1	231870	+		52266	16931	34958	34971	59029	59029					2.5420895212846517E-05
RVASLKAH	8	Unmodified	_RVASLKAH_					0	0	0		nc|ENSG00000130856|Q9UL36-2|ZNF236;nc|ENSG00000130856|Q9UL36|ZNF236;ENSG00000130856|ENST00000320610|ZNF236;ENST00000583095.1_1_18:74563778-74587448:+|nuORF	nc|ENSG00000130856|Q9UL36-2|ZNF236	nc|ENSG00000130856|Q9UL36-2|ZNF236	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.2675476074219	2	441.269419	880.524284	2.7266	0.0012032	-2.8605	-0.0012623	-0.13395	-5.9107E-05	441.2681467354364	102.34	1.2058	102.29	101.75	102.95	-0.047005					43	28	2	0	0	0	0.7961	1	11172	11172		17.365	0	1	339710			52267	3694	34959	34972	59030	59030					0.07924330574087435
RVASLRDCV	9	Unmodified	_RVASLRDCV_					0	0	0			REV__nc|ENSG00000197361|Q6P050|FBXL22	REV__nc|ENSG00000197361|Q6P050|FBXL22	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8036804199219	2	509.776751	1017.53895	-0.37835	-0.00019287	3.291	0.0016777	2.9126	0.0014848	510.2790517315758	86.378	0.12796	86.572	86.508	86.636	0.19379					4	2	2	0	0	0	0.20789	1	8494	8494		44.117	1.7207	1	27286	+		52268	30136	34960	34973	59031	59031					0.030880346599246877
RVATVKAW	8	Unmodified	_RVATVKAW_					0	0	0		nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;ENST00000398792.3_1_10:73483820-73501738:+|nuORF	nc|ENSG00000107736|Q9H251-4|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77752685546875	2	465.779619	929.544686	-1.2002	-0.00055902	-3.1863	-0.0014841	-4.3865	-0.0020432	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.87479	1	7756	7756		30.504	0.18592	1	683640			52269	2362	34961	34974	59032	59032					0.07709501233887295
RVAVEVER	8	Unmodified	_RVAVEVER_					0	0	0			REV__AluSp_dup44932|chr19:1598263-1598561:+|1.7883973533681126|0.1985418116755987|3.17|63.0|8|2|sense	REV__AluSp_dup44932|chr19:1598263-1598561:+|1.7883973533681126|0.1985418116755987|3.17|63.0|8|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2772521972656	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.84341	1	8050	8050		24.203	0	1	6593200	+		52270	15387	34962	34975	59033	59033					0.060319920203255606
RVAVFKDWL	9	Unmodified	_RVAVFKDWL_					0	0	0		ENSG00000237412|ENST00000617714|PRSS56	ENSG00000237412|ENST00000617714|PRSS56	ENSG00000237412|ENST00000617714|PRSS56	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3289794921875	2	567.326934	1132.63931	0.79571	0.00045143	4.1414	0.0023495	4.9371	0.0028009	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.78536	1	9857	9857		29.15	5.6269	1	18145000			52271	8758	34963	34976	59034	59034					0.07830014985211164
RVAVFQLVS	9	Unmodified	_RVAVFQLVS_					0	0	0		ENST00000561228.1_1_14:102843052-102891354:+|nuORF;nc|ENSG00000196663|O15040-2|TECPR2;ENSG00000196663|ENST00000359520|TECPR2	ENST00000561228.1_1_14:102843052-102891354:+|nuORF	ENST00000561228.1_1_14:102843052-102891354:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8037109375	2	509.805834	1017.59712	0.075306	3.8391E-05	-4.2119	-0.0021473	-4.1366	-0.0021089	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.69624	1	8508	8508		40.778	6.6056	1	958280			52272	8089	34964	34977	59035	59035					0.08902039576855714
RVAVFQLVS	9	Unmodified	_RVAVFQLVS_					0	0	0		ENST00000561228.1_1_14:102843052-102891354:+|nuORF;nc|ENSG00000196663|O15040-2|TECPR2;ENSG00000196663|ENST00000359520|TECPR2	ENST00000561228.1_1_14:102843052-102891354:+|nuORF	ENST00000561228.1_1_14:102843052-102891354:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.80364990234375	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.71772	1	8392	8392		39.253	6.4404	1	2989000			52273	8089	34964	34977	59036	59036					0.08902039576855714
RVAVKVKSD	9	Unmodified	_RVAVKVKSD_					0	0	0			REV__ENSG00000197892|ENST00000524189|KIF13B	REV__ENSG00000197892|ENST00000524189|KIF13B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2903747558594	2	501.308741	1000.60293	-0.42861	-0.00021487	1.9534	0.00097928	1.5248	0.00076441	501.30906221262677	86.08	0.4226	86.138	85.977	86.4	0.057899					12	9	2	0	0	0	0.20789	1	8753	8753		37.812	16.865	1	68360	+		52274	23277	34965	34978	59037	59037					0.10265138088516323
RVAVRSPE	8	Unmodified	_RVAVRSPE_					0	0	0		ENST00000607670.1_1_1:6454018-6454348:+|nuORF	ENST00000607670.1_1_1:6454018-6454348:+|nuORF	ENST00000607670.1_1_1:6454018-6454348:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26318359375	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.85277	1	8124	8124		25.45	1.2474	1	4061400			52275	14466	34966	34979	59038	59038					0.05435722848858404
RVAVTRIE	8	Unmodified	_RVAVTRIE_					0	0	0			REV__ENST00000441829.2_9:44302237-44303615:+|nuORF	REV__ENST00000441829.2_9:44302237-44303615:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2894592285156	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.86677	1	10513	10513		27.882	2.4321	1	48574000	+		52276	26762	34967	34980	59039	59039					0.0874858239999412
RVCLLGVL	8	Unmodified	_RVCLLGVL_					0	0	0		nc|ENSG00000136295|Q9C0H2-2|TTYH3	nc|ENSG00000136295|Q9C0H2-2|TTYH3	nc|ENSG00000136295|Q9C0H2-2|TTYH3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7734680175781	2	436.772948	871.531344	0.39754	0.00017364	0.64314	0.00028091	1.0407	0.00045454	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.82464	1	1226	1226		21.702	0	1	81327			52277	14938	34968	34981	59040	59040					0.0904392713028983
RVCVVSVEKPT	11	Unmodified	_RVCVVSVEKPT_					0	0	0		ENSG00000099821|ENST00000588649|POLRMT	ENSG00000099821|ENST00000588649|POLRMT	ENSG00000099821|ENST00000588649|POLRMT	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.836669921875	2	608.839548	1215.66454	-0.14489	-8.8218E-05	-3.7608	-0.0022897	-3.9057	-0.002378	608.8371154069557	110.53	1.2053	110.53	110.28	111.48	0					111	36	5	0	0	0	0.68532	1	11531	11531		33.922	6.0394	1	1502000			52278	1769	34969	34982	59041	59041					0.06533701725493302
RVDAIIERLKP	11	Unmodified	_RVDAIIERLKP_					0	0	0			REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2673034667969	3	437.269866	1308.78777	-0.73822	-0.0003228	-3.8393	-0.0016788	-4.5775	-0.0020016	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.75121	1	4668	4668		21.78	1.4654	1	3639500	+		52279	19131	34970	34983	59042	59042					0.1457270116827658
RVDEEIALR	9	Unmodified	_RVDEEIALR_					0	0	0		nc|ENSG00000107758|P16298-2|PPP3CB;nc|ENSG00000107758|P16298-3|PPP3CB;ENSG00000107758|ENST00000360663|PPP3CB;nc|ENSG00000107758|P16298-4|PPP3CB	nc|ENSG00000107758|P16298-2|PPP3CB	nc|ENSG00000107758|P16298-2|PPP3CB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.806396484375	2	550.806562	1099.59857	-1.5611	-0.00085986	1.7466	0.00096206	0.18555	0.0001022	550.8073038939729	29.672	1.5276	29.666	29.02	30.547	-0.0064812					96	34	5	0	0	0	0.19818	1	1880	1880		74.255	4.6274	1	1060600			52280	2366	34971	34984	59043	59043					0.05275628874915128
RVDEEIALR	9	Unmodified	_RVDEEIALR_					0	0	0		nc|ENSG00000107758|P16298-2|PPP3CB;nc|ENSG00000107758|P16298-3|PPP3CB;ENSG00000107758|ENST00000360663|PPP3CB;nc|ENSG00000107758|P16298-4|PPP3CB	nc|ENSG00000107758|P16298-2|PPP3CB	nc|ENSG00000107758|P16298-2|PPP3CB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	550.806562	1099.59857	0.12225	6.7336E-05	0.63428	0.00034937	0.75653	0.0004167	550.806839784777	30.008	0.49553	30.075	29.846	30.342	0.066727	0.17644	0.00030078	NaN	74.255	30	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81895			52281	2366	34971	34984							0.05275628874915128
RVDEEIALR	9	Unmodified	_RVDEEIALR_					0	0	0		nc|ENSG00000107758|P16298-2|PPP3CB;nc|ENSG00000107758|P16298-3|PPP3CB;ENSG00000107758|ENST00000360663|PPP3CB;nc|ENSG00000107758|P16298-4|PPP3CB	nc|ENSG00000107758|P16298-2|PPP3CB	nc|ENSG00000107758|P16298-2|PPP3CB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	550.806562	1099.59857	0.21085	0.00011614	0.2939	0.00016188	0.50475	0.00027802	550.8064726789476	29.623	0.44572	29.735	29.531	29.977	0.11225	-0.1633	-7.4188E-05	NaN	74.255	34	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80506			52282	2366	34971	34984							0.05275628874915128
RVDEEIALR	9	Unmodified	_RVDEEIALR_					0	0	0		nc|ENSG00000107758|P16298-2|PPP3CB;nc|ENSG00000107758|P16298-3|PPP3CB;ENSG00000107758|ENST00000360663|PPP3CB;nc|ENSG00000107758|P16298-4|PPP3CB	nc|ENSG00000107758|P16298-2|PPP3CB	nc|ENSG00000107758|P16298-2|PPP3CB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	550.806562	1099.59857	0.62017	0.00034159	-0.77113	-0.00042474	-0.15096	-8.3148E-05	550.8063802850046	29.875	0.53528	29.886	29.565	30.1	0.011229	-0.011915	-0.0012474	NaN	74.255	38	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80633			52283	2366	34971	34984							0.05275628874915128
RVDFLRARG	9	Unmodified	_RVDFLRARG_					0	0	0			REV__chr1:161038634-161038880|35|13.91|0.0|20.41|-|2|None,TSTD1|1	REV__chr1:161038634-161038880|35|13.91|0.0|20.41|-|2|None,TSTD1|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3167724609375	2	545.317432	1088.62031	-0.68757	-0.00037494	-0.58844	-0.00032088	-1.276	-0.00069583	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.67345	1	8534	8534		42.396	3.1433	1	3608000	+		52284	15421	34972	34985	59044	59044					0.07954478414171717
RVDFLRARG	9	Unmodified	_RVDFLRARG_					0	0	0			REV__chr1:161038634-161038880|35|13.91|0.0|20.41|-|2|None,TSTD1|1	REV__chr1:161038634-161038880|35|13.91|0.0|20.41|-|2|None,TSTD1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3170166015625	2	545.317432	1088.62031	-0.33932	-0.00018504	-1.0312	-0.00056233	-1.3705	-0.00074737	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.78983	1	8945	8945		27.882	0	1	4710900	+		52285	15421	34972	34985	59045	59045					0.07954478414171717
RVDFLRARG	9	Unmodified	_RVDFLRARG_					0	0	0			REV__chr1:161038634-161038880|35|13.91|0.0|20.41|-|2|None,TSTD1|1	REV__chr1:161038634-161038880|35|13.91|0.0|20.41|-|2|None,TSTD1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3167114257812	2	545.317432	1088.62031	1.9901	0.0010853	-3.3293	-0.0018155	-1.3392	-0.00073027	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.76764	1	9312	9312		34.173	2.2177	1	4704900	+		52286	15421	34972	34985	59046	59046					0.07954478414171717
RVDFLRARG	9	Unmodified	_RVDFLRARG_					0	0	0			REV__chr1:161038634-161038880|35|13.91|0.0|20.41|-|2|None,TSTD1|1	REV__chr1:161038634-161038880|35|13.91|0.0|20.41|-|2|None,TSTD1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3167724609375	2	545.317432	1088.62031	1.1684	0.00063715	-2.5262	-0.0013776	-1.3578	-0.00074041	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.71772	2	9150	9150;9198		39.253	3.8548	1	4705800	+		52287	15421	34972	34985	59047;59048	59047					0.07954478414171717
RVDFLRARG	9	Unmodified	_RVDFLRARG_					0	0	0			REV__chr1:161038634-161038880|35|13.91|0.0|20.41|-|2|None,TSTD1|1	REV__chr1:161038634-161038880|35|13.91|0.0|20.41|-|2|None,TSTD1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.3164672851562	2	545.317432	1088.62031	0.73643	0.00040159	-2.1406	-0.0011673	-1.4042	-0.00076572	545.316117867523	88.493	3.0395	88.643	86.614	89.654	0.15055					258	71	4	0	0	0	0.77244	1	8740	8740		32.812	0.85756	1	5181100	+		52288	15421	34972	34985	59049	59049					0.07954478414171717
RVDGLMLKFV	10	Unmodified	_RVDGLMLKFV_					0	0	0		ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3427124023438	2	589.341726	1176.6689	-0.67475	-0.00039766	2.4486	0.0014431	1.7739	0.0010454	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.86218	1	9497	9497		32.812	0	1	5429300			52289	2594	34973	34986	59050	59050					0.08763210939059718
RVDGLMLKFV	10	Unmodified	_RVDGLMLKFV_					0	0	0		ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3431396484375	2	589.341726	1176.6689	-0.6745	-0.00039751	2.6065	0.0015361	1.932	0.0011386	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.86348	1	10193	10193		31.53	1.2121	1	16185000			52290	2594	34973	34986	59051	59051					0.08763210939059718
RVDGLMLKFV	10	Unmodified	_RVDGLMLKFV_					0	0	0		ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3428344726562	2	589.341726	1176.6689	-0.65438	-0.00038565	2.6476	0.0015603	1.9932	0.0011747	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.8608	2	10188	10188;10225		34.173	7.4796	1	16804000			52291	2594	34973	34986	59052;59053	59052					0.08763210939059718
RVDGLMLKFV	10	Unmodified	_RVDGLMLKFV_					0	0	0		ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3424682617188	2	589.341726	1176.6689	0.80964	0.00047716	0.92916	0.00054759	1.7388	0.0010247	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.8608	1	9455	9455		34.173	1.3601	1	6634500			52292	2594	34973	34986	59054	59054					0.08763210939059718
RVDKAQPN	8	Unmodified	_RVDKAQPN_					0	0	0			REV__nc|ENSG00000182504|Q8IW35-2|CEP97	REV__nc|ENSG00000182504|Q8IW35-2|CEP97	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2536926269531	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.93293	1	7896	7896		51.335	6.9583	1	946850	+		52293	22528	34974	34987	59055	59055					0.027191324691784757
RVDKAQPN	8	Unmodified	_RVDKAQPN_					0	0	0			REV__nc|ENSG00000182504|Q8IW35-2|CEP97	REV__nc|ENSG00000182504|Q8IW35-2|CEP97	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.25396728515625	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.92394	2	8560	8560;8609		51.335	3.4199	1	1578600	+		52294	22528	34974	34987	59056;59057	59056					0.027191324691784757
RVDKAQPN	8	Unmodified	_RVDKAQPN_					0	0	0			REV__nc|ENSG00000182504|Q8IW35-2|CEP97	REV__nc|ENSG00000182504|Q8IW35-2|CEP97	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.25390625	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.93293	1	8111	8111		51.335	0.14276	1	1603800	+		52295	22528	34974	34987	59058	59058					0.027191324691784757
RVDKARGR	8	Unmodified	_RVDKARGR_					0	0	0		ENST00000559000.5_1_15:57210403-57210766:-|nuORF	ENST00000559000.5_1_15:57210403-57210766:-|nuORF	ENST00000559000.5_1_15:57210403-57210766:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.28839111328125	2	479.288674	956.562795	-0.48591	-0.00023289	0.36515	0.00017501	-0.12076	-5.788E-05	479.2887487505733	16.967	0.38927	16.356	16.177	16.567	-0.6107					20	8	3	0	0	0	0.42407	1	203	203		79.451	2.6769	1	529470			52296	13800	34975	34988	59059	59059					0.08277636208606509
RVDLIKLS	8	Unmodified	_RVDLIKLS_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.28753662109375	2	472.300384	942.586216	-0.37201	-0.0001757	-1.2498	-0.00059026	-1.6218	-0.00076596	472.29957575054397	95.266	0.19682	95.686	95.587	95.784	0.41964					5	4	2	0	0	0	0.4196	1	11437	11437		16.473	0	1	117490	+		52297	18883	34976	34989	59060	59060					0.112626372025602
RVDMVLLL	8	Oxidation (M)	_RVDM(Oxidation (M))VLLL_		RVDM(1)VLLL		RVDM(48)VLLL	0	0	1			REV__nc|ENSG00000290684|A6NFC9|OR2W5P	REV__nc|ENSG00000290684|A6NFC9|OR2W5P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7906494140625	2	487.788795	973.563038	0.6235	0.00030414	2.5998	0.0012681	3.2233	0.0015723	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.92457	1	7913	7913		47.916	9.1095	1	479320	+		52298	30296	34977	34990	59061	59061		443			0.07519875093601058
RVDPAFDKDR	10	Unmodified	_RVDPAFDKDR_					0	0	0		ENST00000598675.1_1_19:7997268-7998765:-|nuORF;ENSG00000104980|ENST00000270538|TIMM44	ENST00000598675.1_1_19:7997268-7998765:-|nuORF	ENST00000598675.1_1_19:7997268-7998765:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.87872314453125	3	406.879038	1217.61528	0.91173	0.00037096	-0.49664	-0.00020207	0.41509	0.00016889	406.87878322795524	18.247	0.71156	18.323	18.125	18.837	0.075441					39	23	3	0	0	0	0.85979	1	286	286		35.178	5.6275	1	460920			52299	2178	34978	34991	59062	59062					0.01518129760870579
RVDPIKPRDSK	11	Unmodified	_RVDPIKPRDSK_					0	0	0		ENSG00000155875|ENST00000380534|SAXO1	ENSG00000155875|ENST00000380534|SAXO1	ENSG00000155875|ENST00000380534|SAXO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.5871276855469	3	437.589487	1309.74663	0.048366	2.1165E-05	-1.8709	-0.00081869	-1.8225	-0.00079753	437.5884411335893	50.521	0.86349	50.969	50.641	51.504	0.44761					49	20	3	0	0	0	0.73647	1	4969	4969		25.068	0.83596	1	918220			52300	5347	34979	34992	59063	59063					0.10414940128771377
RVDPRIGG	8	Unmodified	_RVDPRIGG_					0	0	0		nc|ENSG00000134755|Q02487-2|DSC2;ENSG00000134755|ENST00000280904|DSC2	nc|ENSG00000134755|Q02487-2|DSC2	nc|ENSG00000134755|Q02487-2|DSC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25152587890625	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.89962	1	7278	7278		38.806	0	1	1788100			52301	14934	34980	34993	59064	59064					0.04839453677391248
RVDPRIGG	8	Unmodified	_RVDPRIGG_					0	0	0		nc|ENSG00000134755|Q02487-2|DSC2;ENSG00000134755|ENST00000280904|DSC2	nc|ENSG00000134755|Q02487-2|DSC2	nc|ENSG00000134755|Q02487-2|DSC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2514953613281	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87479	1	7631	7631		30.504	5.0535	1	2494100			52302	14934	34980	34993	59065	59065					0.04839453677391248
RVDRIPGG	8	Unmodified	_RVDRIPGG_					0	0	0			REV__ENSG00000172318|ENST00000392690|B3GALT1	REV__ENSG00000172318|ENST00000392690|B3GALT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2521667480469	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.86791	5	7174	7174;7315;7336;7478;7487		38.806	5.0535	1	1788100	+		52303	21817	34981	34994	59066;59067;59068;59069;59070	59066					0.04839453677391248
RVDRIPGG	8	Unmodified	_RVDRIPGG_					0	0	0			REV__ENSG00000172318|ENST00000392690|B3GALT1	REV__ENSG00000172318|ENST00000392690|B3GALT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2514343261719	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.85277	11	7768	7684;7768;7802;7829;7862;7879;7912;7934;7946;7995;8007		38.806	2.2494	1	2823900	+		52304	21817	34981	34994	59071;59072;59073;59074;59075;59076;59077;59078;59079;59080;59081	59072					0.04839453677391248
RVDRIPGG	8	Unmodified	_RVDRIPGG_					0	0	0			REV__ENSG00000172318|ENST00000392690|B3GALT1	REV__ENSG00000172318|ENST00000392690|B3GALT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25201416015625	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.8347	14	8291	7711;7901;7920;7929;7957;7969;7979;7989;7997;8041;8065;8138;8150;8291		33.516	3.7075	1	3292300	+		52305	21817	34981	34994	59082;59083;59084;59085;59086;59087;59088;59089;59090;59091;59092;59093;59094;59095	59095					0.04839453677391248
RVDRIPGG	8	Unmodified	_RVDRIPGG_					0	0	0			REV__ENSG00000172318|ENST00000392690|B3GALT1	REV__ENSG00000172318|ENST00000392690|B3GALT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2519226074219	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.85277	8	7711	7711;7744;7763;7847;7856;7881;7905;8180		33.516	3.7075	1	3370400	+		52306	21817	34981	34994	59096;59097;59098;59099;59100;59101;59102;59103	59096					0.04839453677391248
RVDRIPGG	8	Unmodified	_RVDRIPGG_					0	0	0			REV__ENSG00000172318|ENST00000392690|B3GALT1	REV__ENSG00000172318|ENST00000392690|B3GALT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2519836425781	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.85277	13	7398	7398;7435;7482;7501;7519;7536;7546;7555;7616;7648;7657;7680;7786		33.516	0	1	3322700	+		52307	21817	34981	34994	59104;59105;59106;59107;59108;59109;59110;59111;59112;59113;59114;59115;59116	59104					0.04839453677391248
RVDRIPGG	8	Unmodified	_RVDRIPGG_					0	0	0			REV__ENSG00000172318|ENST00000392690|B3GALT1	REV__ENSG00000172318|ENST00000392690|B3GALT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2517395019531	2	435.251226	868.487899	0.52341	0.00022781	-0.3479	-0.00015142	0.17551	7.639E-05	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.92457	1	7245	7245		47.916	9.1095	1	712390	+		52308	21817	34981	34994	59117	59117					0.04839453677391248
RVDRIPGG	8	Unmodified	_RVDRIPGG_					0	0	0			REV__ENSG00000172318|ENST00000392690|B3GALT1	REV__ENSG00000172318|ENST00000392690|B3GALT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25177001953125	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.87479	2	7390	7390;7573		38.806	1.3541	1	2743300	+		52309	21817	34981	34994	59118;59119	59118					0.04839453677391248
RVDRIPGG	8	Unmodified	_RVDRIPGG_					0	0	0			REV__ENSG00000172318|ENST00000392690|B3GALT1	REV__ENSG00000172318|ENST00000392690|B3GALT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2514343261719	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.85277	7	7528	7480;7496;7528;7559;7674;7753;7789		38.806	8.3025	1	2494100	+		52310	21817	34981	34994	59120;59121;59122;59123;59124;59125;59126	59122					0.04839453677391248
RVDRIPGG	8	Unmodified	_RVDRIPGG_					0	0	0			REV__ENSG00000172318|ENST00000392690|B3GALT1	REV__ENSG00000172318|ENST00000392690|B3GALT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25177001953125	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.85277	2	9014	9014;9182		30.504	0	1	2020200	+		52311	21817	34981	34994	59127;59128	59127					0.04839453677391248
RVDRIPGG	8	Unmodified	_RVDRIPGG_					0	0	0			REV__ENSG00000172318|ENST00000392690|B3GALT1	REV__ENSG00000172318|ENST00000392690|B3GALT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25152587890625	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.85277	1	9286	9286		25.45	0	1	2235800	+		52312	21817	34981	34994	59129	59129					0.04839453677391248
RVDYFNQYI	9	Unmodified	_RVDYFNQYI_					0	0	0		ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	ENSG00000115850|ENST00000264162|LCT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.53900146484375	3	406.536501	1216.58767	2.5998	0.0010569	3.7121	0.0015091	6.3119	0.002566	406.5379245246649	30.675	0.89445	30.664	30.372	31.266	-0.010656					61	22	4	0	0	0	0.58063	1	1635	1635		47.96	12.807	1	291610			52313	2876	34982	34995	59130	59130					-0.011957734993302438
RVEEINKQVKK	11	Unmodified	_RVEEINKQVKK_					0	0	0			REV__nc|ENSG00000228970|P0CB48|UBTFL6	REV__nc|ENSG00000228970|P0CB48|UBTFL6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7928161621094	3	457.608659	1369.80415	-1.1072	-0.00050666	0.84163	0.00038514	-0.26556	-0.00012152	457.6089636839043	38.291	0.65829	38.241	37.894	38.553	-0.050369					27	14	3	0	0	0	0.17302	1	2714	2714		21.032	0	1	76410	+		52314	30215	34983	34996	59131	59131					0.13403782334330572
RVEGKRLVW	9	Unmodified	_RVEGKRLVW_					0	0	0		ENST00000433206.6_1_17:37076299-37076548:+|nuORF	ENST00000433206.6_1_17:37076299-37076548:+|nuORF	ENST00000433206.6_1_17:37076299-37076548:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.8685913085938	2	571.843282	1141.67201	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.728	1	67.788	67.288	68.288	0.059288								0	0	0	0.29134	1	6047	6047		34.173	5.023	1				52315	11682	34984	34997	59132	59132					0.10684222108102404
RVEGRPQGGGH	11	Unmodified	_RVEGRPQGGGH_					0	0	0		ENST00000343738.10_1_16:15227887-15231353:-|nuORF	ENST00000343738.10_1_16:15227887-15231353:-|nuORF	ENST00000343738.10_1_16:15227887-15231353:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.2973022460938	2	575.297227	1148.5799	-0.68021	-0.00039132	0.59319	0.00034126	-0.087021	-5.0063E-05	575.2974888485829	42.739	0.6573	42.739	42.41	43.067	0.00016785					36	15	3	0	0	0	0.67778	1	3258	3258		35.152	4.8343	1	252980			52316	10280	34985	34998	59133	59133					0.011555120237744632
RVEHFVHQ	8	Unmodified	_RVEHFVHQ_					0	0	0		ENSG00000115602|ENST00000233954|IL1RL1	ENSG00000115602|ENST00000233954|IL1RL1	ENSG00000115602|ENST00000233954|IL1RL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.36083984375	2	526.275232	1050.53591	-0.22496	-0.00011839	-0.82104	-0.00043209	-1.046	-0.00055049	526.2747218018017	35.521	0.67529	35.465	35.25	35.925	-0.055904					25	14	2	0	0	0	0.4196	1	2302	2302		65.803	14.468	1	73101			52317	2860	34986	34999	59134	59134					0.012665275974313772
RVEIKDVRIPV	11	Unmodified	_RVEIKDVRIPV_					0	0	0		nc|ENSG00000133115|Q8TAV4-2|STOML3;ENSG00000133115|ENST00000379631|STOML3	nc|ENSG00000133115|Q8TAV4-2|STOML3	nc|ENSG00000133115|Q8TAV4-2|STOML3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.9398193359375	3	441.94175	1322.80342	-1.6543	-0.0007311	-2.5549	-0.0011291	-4.2092	-0.0018602	441.9404880038731	55.736	1.19	55.736	54.998	56.188	0					100	33	4	0	0	0	0.76579	1	4735	4735		18.531	5.5736	1	347630			52318	3859	34987	35000	59135	59135					0.15492987685320259
RVEIKDVRIPV	11	Unmodified	_RVEIKDVRIPV_					0	0	0		nc|ENSG00000133115|Q8TAV4-2|STOML3;ENSG00000133115|ENST00000379631|STOML3	nc|ENSG00000133115|Q8TAV4-2|STOML3	nc|ENSG00000133115|Q8TAV4-2|STOML3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9399719238281	3	441.94175	1322.80342	-1.4738	-0.00065135	-3.037	-0.0013422	-4.5109	-0.0019936	441.94028424164003	56.309	0.61998	56.381	55.844	56.464	0.071835					69	31	3	0	0	0	0.72374	1	4744	4744		27.644	8.017	1	795270			52319	3859	34987	35000	59136	59136					0.15492987685320259
RVEKGLPLWL	10	Unmodified	_RVEKGLPLWL_					0	0	0			REV__ENST00000450133.5_1_7:32956958-32982633:-|nuORF	REV__ENST00000450133.5_1_7:32956958-32982633:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.8733520507812	2	605.868966	1209.72338	2.1175	0.0012829	3.5745	0.0021657	5.692	0.0034486	605.8709120957792	99.886	1.4328	100.22	99.77	101.2	0.33295					98	35	4	0	0	0	0.8651	1	12086	12086		25.574	3.6142	1	1222300	+		52320	26863	34988	35001	59137	59137					0.12690546082149012
RVELGEKPLRI	11	Unmodified	_RVELGEKPLRI_					0	0	0		ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1;ENST00000550179.1_1_12:56524667-56524898:+|nuORF	ENSG00000139641|ENST00000394048|ESYT1	ENSG00000139641|ENST00000394048|ESYT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2676696777344	3	437.269866	1308.78777	-0.7643	-0.0003342	-3.8462	-0.0016818	-4.6105	-0.002016	437.2680989446087	50.458	1.6052	50.435	49.633	51.238	-0.02343					188	43	5	0	0	0	0.75779	1	4326	4326		20.315	1.0523	1	2919200			52321	4386	34989	35002	59138	59138					0.1457270116827658
RVELIRTD	8	Unmodified	_RVELIRTD_					0	0	0			REV__ENST00000464458.1_1_2:95770271-95772347:-|nuORF	REV__ENST00000464458.1_1_2:95770271-95772347:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2901611328125	2	501.290548	1000.56654	1.074	0.0005384	-0.95103	-0.00047674	0.123	6.1661E-05	501.2899614179589	99.045	1.3844	99.406	98.936	100.32	0.36136					73	34	3	0	0	0	0.90089	1	11952	11952		39.253	2.0937	1	1114100	+		52322	19865	34990	35003	59139	59139					0.06628261191815454
RVEPRISD	8	Unmodified	_RVEPRISD_					0	0	0			REV__ENST00000489798.5_1_7:144340663-144433304:-|nuORF	REV__ENST00000489798.5_1_7:144340663-144433304:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.26708984375	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.89962	1	8595	8595		38.806	1.7777	1	1702800	+		52323	23138	34991	35004	59140	59140					0.03315401640657001
RVEPRISD	8	Unmodified	_RVEPRISD_					0	0	0			REV__ENST00000489798.5_1_7:144340663-144433304:-|nuORF	REV__ENST00000489798.5_1_7:144340663-144433304:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.26690673828125	2	486.267073	970.519593	-0.74239	-0.000361	0.70437	0.00034251	-0.038029	-1.8492E-05	486.2673170980509	86.118	3.9821	86.565	85.471	89.453	0.44736					252	97	4	0	0	0	0.89962	1	10019	10019		38.806	0	1	1474100	+		52324	23138	34991	35004	59141	59141					0.03315401640657001
RVERARGPPL	10	Unmodified	_RVERARGPPL_					0	0	0		ENSG00000120055|ENST00000625129|C10orf95	ENSG00000120055|ENST00000625129|C10orf95	ENSG00000120055|ENST00000625129|C10orf95	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8432006835938	2	575.843813	1149.67307	-0.46596	-0.00026832	-0.81024	-0.00046657	-1.2762	-0.00073489	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.86348	1	9003	9003		31.53	0	1	3411000			52325	3111	34992	35005	59142	59142					0.10422436476983421
RVERARGPPL	10	Unmodified	_RVERARGPPL_					0	0	0		ENSG00000120055|ENST00000625129|C10orf95	ENSG00000120055|ENST00000625129|C10orf95	ENSG00000120055|ENST00000625129|C10orf95	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.84326171875	2	575.843813	1149.67307	0.91496	0.00052687	-2.3716	-0.0013657	-1.4567	-0.00083881	575.8423131361362	90.432	2.8004	90.479	88.667	91.467	0.046448					215	66	4	0	0	0	0.86218	1	9429	9429		32.812	0.85756	1	2025300			52326	3111	34992	35005	59143	59143					0.10422436476983421
RVERARGPPL	10	Unmodified	_RVERARGPPL_					0	0	0		ENSG00000120055|ENST00000625129|C10orf95	ENSG00000120055|ENST00000625129|C10orf95	ENSG00000120055|ENST00000625129|C10orf95	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8428344726562	2	575.843813	1149.67307	0.61103	0.00035186	-2.2107	-0.001273	-1.5997	-0.00092115	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.80179	3	9299	9299;9382;9491		39.253	6.4404	1	6623700			52327	3111	34992	35005	59144;59145;59146	59144					0.10422436476983421
RVERARGPPL	10	Unmodified	_RVERARGPPL_					0	0	0		ENSG00000120055|ENST00000625129|C10orf95	ENSG00000120055|ENST00000625129|C10orf95	ENSG00000120055|ENST00000625129|C10orf95	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8431396484375	2	575.843813	1149.67307	-1.368	-0.00078774	-0.033632	-1.9367E-05	-1.4016	-0.00080711	575.8436459594299	90.372	2.9394	90.548	88.581	91.52	0.1758					221	69	4	0	0	0	0.82886	1	8899	8899		37.812	13.609	1	2135900			52328	3111	34992	35005	59147	59147					0.10422436476983421
RVERARGPPL	10	Unmodified	_RVERARGPPL_					0	0	0		ENSG00000120055|ENST00000625129|C10orf95	ENSG00000120055|ENST00000625129|C10orf95	ENSG00000120055|ENST00000625129|C10orf95	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8430786132812	2	575.843813	1149.67307	-1.368	-0.00078773	-0.22538	-0.00012979	-1.5933	-0.00091752	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.82886	1	9262	9262		37.812	0.65241	1	6121300			52329	3111	34992	35005	59148	59148					0.10422436476983421
RVERDLGVQV	10	Unmodified	_RVERDLGVQV_					0	0	0			REV__ENST00000524089.1_1_16:89238206-89251879:+|nuORF	REV__ENST00000524089.1_1_16:89238206-89251879:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.83203125	2	585.833111	1169.65167	-0.9232	-0.00054084	-3.7775	-0.002213	-4.7007	-0.0027538	585.8307293050794	57.888	1.4017	57.888	57.479	58.881	0					105	56	3	0	0	0	0.86763	1	5088	5088		26.693	1.1189	1	164040	+		52330	28153	34993	35006	59149	59149					0.07363006657601545
RVERSRHL	8	Unmodified	_RVERSRHL_					0	0	0			REV__nc|ENSG00000129003|Q709C8-4|VPS13C	REV__nc|ENSG00000129003|Q709C8-4|VPS13C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8070678710938	2	526.807231	1051.59991	2.4511	0.0012913	-1.9686	-0.001037	0.48256	0.00025421	526.8063545435555	100.49	2.2675	100.83	100.38	102.64	0.34591					144	58	4	0	0	0	0.89962	2	12349	12349;12410		38.806	5.2906	1	37709000	+		52331	18801	34994	35007	59150;59151	59150					0.07617307754389913
RVERSRHL	8	Unmodified	_RVERSRHL_					0	0	0			REV__nc|ENSG00000129003|Q709C8-4|VPS13C	REV__nc|ENSG00000129003|Q709C8-4|VPS13C	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8084106445312	2	526.807231	1051.59991	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.6	1	102.9	102.4	103.4	0.29865								0	0	0	0.29596	1	12505	12505		35.618	1.4457	1		+		52332	18801	34994	35007	59152	59152					0.07617307754389913
RVEVPEAL	8	Unmodified	_RVEVPEAL_					0	0	0		ENSG00000170807|ENST00000458573|LMOD2	ENSG00000170807|ENST00000458573|LMOD2	ENSG00000170807|ENST00000458573|LMOD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.302001953125	2	456.761092	911.507631	-1.0919	-0.00049873	0.29482	0.00013466	-0.79707	-0.00036407	456.7610409192039	43.243	0.60644	43.207	42.928	43.534	-0.03582					19	13	2	0	0	0	0.4196	1	3370	3370		25.45	0	1	57389			52333	6615	34995	35008	59153	59153					0.04833784897471105
RVFAGAVR	8	Unmodified	_RVFAGAVR_					0	0	0		ENST00000502907.1_1_5:54826350-54830715:-|nuORF;ENST00000515132.5_1_5:54763945-54830715:-|nuORF	ENST00000502907.1_1_5:54826350-54830715:-|nuORF	ENST00000502907.1_1_5:54826350-54830715:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2638244628906	2	438.264136	874.51372	-1.0936	-0.00047928	-0.34853	-0.00015275	-1.4421	-0.00063203	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.84341	1	2820	2820		24.203	0	1	2862500			52334	12869	34996	35009	59154	59154					0.07144347919654592
RVFGALGP	8	Unmodified	_RVFGALGP_					0	0	0		ENST00000448083.6_1_11:65659587-65659689:-|nuORF;ENST00000602040.5_1_19:50354666-50357992:+|nuORF;ENST00000601501.5_1_19:50354350-50358367:+|nuORF;ENST00000598632.5_1_19:50354098-50358367:+|nuORF;nc|ENSG00000104960|Q86YD1-2|PTOV1;ENSG00000104960|ENST00000391842|PTOV1	ENST00000448083.6_1_11:65659587-65659689:-|nuORF	ENST00000448083.6_1_11:65659587-65659689:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.73956298828125	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.89567	1	1906	1906		57.453	5.1535	1	1448600			52335	2173	34997	35010	59155	59155					0.050258542797678274
RVFGALGP	8	Unmodified	_RVFGALGP_					0	0	0		ENST00000448083.6_1_11:65659587-65659689:-|nuORF;ENST00000602040.5_1_19:50354666-50357992:+|nuORF;ENST00000601501.5_1_19:50354350-50358367:+|nuORF;ENST00000598632.5_1_19:50354098-50358367:+|nuORF;nc|ENSG00000104960|Q86YD1-2|PTOV1;ENSG00000104960|ENST00000391842|PTOV1	ENST00000448083.6_1_11:65659587-65659689:-|nuORF	ENST00000448083.6_1_11:65659587-65659689:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7395935058594	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.92176	1	1901	1901		46.766	2.2354	1	1654100			52336	2173	34997	35010	59156	59156					0.050258542797678274
RVFKISPQ	8	Unmodified	_RVFKISPQ_					0	0	0			REV__nc|ENSG00000108506|Q9H0H0|INTS2	REV__nc|ENSG00000108506|Q9H0H0|INTS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7904357910156	2	487.792727	973.5709	-1.4694	-0.00071678	-3.0475	-0.0014866	-4.5169	-0.0022033	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.90983	1	8258	8258		42.396	5.237	1	607090	+		52337	17714	34998	35011	59157	59157					0.08305770405377189
RVFKRWRAVNL	11	Unmodified	_RVFKRWRAVNL_					0	0	0		nc|ENSG00000183654|A6NNE9-2|MARCHF11;ENSG00000183654|ENST00000332432|MARCHF11	nc|ENSG00000183654|A6NNE9-2|MARCHF11	nc|ENSG00000183654|A6NNE9-2|MARCHF11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.2922668457031	3	482.293117	1443.85752	-0.17598	-8.4875E-05	-0.37792	-0.00018227	-0.5539	-0.00026714	482.2921180539914	16.781	0.47096	16.17	15.958	16.429	-0.6107					24	10	4	0	0	0	0.78683	1	188	188		14.086	1.1285	1	175420			52338	7548	34999	35012	59158	59158					0.1533462462755324
RVFLWLPR	8	Unmodified	_RVFLWLPR_					0	0	0		chr19:48327950-48329352|28|129.39|0.59|7.79|+|2|TE_info:AluSq,AluSq_dup17599,Alu,SINE,donor,-,48327799,48327950|None,EMP3|2	chr19:48327950-48329352|28|129.39|0.59|7.79|+|2|TE_info:AluSq,AluSq_dup17599,Alu,SINE,donor,-,48327799,48327950|None,EMP3|2	chr19:48327950-48329352|28|129.39|0.59|7.79|+|2|TE_info:AluSq,AluSq_dup17599,Alu,SINE,donor,-,48327799,48327950|None,EMP3|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.8318481445312	2	543.832186	1085.64982	-0.14533	-7.9038E-05	-0.53308	-0.00028991	-0.67842	-0.00036895	543.8317864425298	25.039	0.67674	24.711	24.384	25.061	-0.32825					20	14	2	0	0	0	0.90465	1	1262	1262		40.573	4.1259	1	146150			52339	287	35000	35013	59159	59159					0.11042042430312904
RVFMKSVK	8	Unmodified	_RVFMKSVK_					0	0	0		ENSG00000101161|ENST00000266079|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.79498291015625	2	497.796955	993.579357	-0.92593	-0.00046092	-1.3157	-0.00065495	-2.2416	-0.0011159	497.79610236473553	46.294	0.72507	47.217	46.794	47.519	0.92315					52	17	4	0	0	0	0.89494	1	4385	4385		37.159	1.9584	1	1386700			52340	1902	35001	35014	59160	59160					0.0823100105035337
RVFMLLSCIG	10	Unmodified	_RVFMLLSCIG_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.80859375	2	569.809205	1137.60386	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.313	1	18.237	17.737	18.737	-0.07671								0	0	0	0.45132	1	290	290		31.53	2.3803	1				52341	2871	35002	35015	59161	59161					0.040558931415489496
RVFQEVAQK	9	Unmodified	_RVFQEVAQK_					0	0	0		nc|ENSG00000135439|Q99490|AGAP2;ENSG00000135439|ENST00000547588|AGAP2;nc|ENSG00000135439|Q99490-2|AGAP2	nc|ENSG00000135439|Q99490|AGAP2	nc|ENSG00000135439|Q99490|AGAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.8106689453125	2	552.811648	1103.60874	0.84574	0.00046753	-0.68465	-0.00037848	0.16109	8.9052E-05	552.8111137403027	28.325	0.86969	28.151	27.89	28.76	-0.17336					45	21	3	0	0	0	0.36616	1	1720	1720		60.118	1.3363	1	373020			52342	4019	35003	35016	59162	59162					0.061082366001983246
RVFSACSRR	9	Unmodified	_RVFSACSRR_					0	0	0		ENSG00000149451|ENST00000356518|ADAM33;nc|ENSG00000149451|Q9BZ11-2|ADAM33	ENSG00000149451|ENST00000356518|ADAM33	ENSG00000149451|ENST00000356518|ADAM33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.287109375	2	541.287817	1080.56108	-0.40661	-0.0002201	-4.1445	-0.0022434	-4.5511	-0.0024635	541.2854856444462	21.769	1.1064	21.14	20.586	21.692	-0.62834					53	27	3	0	0	0	0.44421	1	830	830		54.776	6.8168	1	346250			52343	5026	35004	35017	59163	59163					0.024022591283483052
RVFSWSQAK	9	Unmodified	_RVFSWSQAK_					0	0	0		ENST00000286692.8_1_1:111682258-111682414:-|nuORF	ENST00000286692.8_1_1:111682258-111682414:-|nuORF	ENST00000286692.8_1_1:111682258-111682414:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.7991333007812	2	554.79854	1107.58253	-0.11728	-6.5066E-05	0.51989	0.00028843	0.40261	0.00022337	554.7985509678973	37.843	0.84414	38.156	37.825	38.669	0.31312					45	21	3	0	0	0	0.01194	1	3071	3071		131.62	57.361	1	1018700			52344	9656	35005	35018	59164	59164					0.03303967428701071
RVFSWSQAK	9	Unmodified	_RVFSWSQAK_					0	0	0		ENST00000286692.8_1_1:111682258-111682414:-|nuORF	ENST00000286692.8_1_1:111682258-111682414:-|nuORF	ENST00000286692.8_1_1:111682258-111682414:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.798583984375	2	554.79854	1107.58253	0.092806	5.1488E-05	-0.081122	-4.5007E-05	0.011683	6.4819E-06	554.798363765238	37.668	0.76633	38.154	37.908	38.675	0.48581					36	19	2	0	0	0	0.086373	2	3065	3065;3077		95.815	24.519	1	1043700			52345	9656	35005	35018	59165;59166	59165					0.03303967428701071
RVFTGVVTK	9	Unmodified	_RVFTGVVTK_					0	0	0		nc|ENSG00000060339|Q8IX12-2|CCAR1;ENSG00000060339|ENST00000265872|CCAR1	nc|ENSG00000060339|Q8IX12-2|CCAR1	nc|ENSG00000060339|Q8IX12-2|CCAR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.8055114746094	2	503.805834	1005.59712	-0.54753	-0.00027585	0.1748	8.8068E-05	-0.37273	-0.00018778	503.8058430357511	32.097	1.1151	32.224	31.903	33.018	0.12643					64	25	4	0	0	0	0.045756	4	2239	2203;2215;2227;2239		109.48	21.724	1	2789600			52346	1062	35006	35019	59167;59168;59169;59170	59170					0.09454039576860396
RVFTGVVTK	9	Unmodified	_RVFTGVVTK_					0	0	0		nc|ENSG00000060339|Q8IX12-2|CCAR1;ENSG00000060339|ENST00000265872|CCAR1	nc|ENSG00000060339|Q8IX12-2|CCAR1	nc|ENSG00000060339|Q8IX12-2|CCAR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.8055419921875	2	503.805834	1005.59712	1.1054	0.00055688	-1.493	-0.00075218	-0.38763	-0.00019529	503.8050278762913	32.007	1.1115	32.114	31.802	32.914	0.10707					65	25	4	0	0	0	0.085559	4	2233	2210;2221;2233;2251		96.034	13.729	1	2910600			52347	1062	35006	35019	59171;59172;59173;59174	59173					0.09454039576860396
RVFYKVKS	8	Unmodified	_RVFYKVKS_					0	0	0		ENSG00000156030|ENST00000423556|MIDEAS	ENSG00000156030|ENST00000423556|MIDEAS	ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8092651367188	2	513.808377	1025.6022	-0.38547	-0.00019806	1.7192	0.00088333	1.3337	0.00068527	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.84341	1	3927	3927		24.203	2.5004	1	1377600			52348	5359	35007	35020	59175	59175					0.09042343439477918
RVFYKVKS	8	Unmodified	_RVFYKVKS_					0	0	0		ENSG00000156030|ENST00000423556|MIDEAS	ENSG00000156030|ENST00000423556|MIDEAS	ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8073120117188	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.884	1	4146	4146		33.516	8.0654	1	926440			52349	5359	35007	35020	59176	59176					0.09042343439477918
RVFYKVKS	8	Unmodified	_RVFYKVKS_					0	0	0		ENSG00000156030|ENST00000423556|MIDEAS	ENSG00000156030|ENST00000423556|MIDEAS	ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8087768554688	2	513.808377	1025.6022	-0.30203	-0.00015519	1.5478	0.00079525	1.2457	0.00064007	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.85277	1	4212	4212		25.45	0	1	861580			52350	5359	35007	35020	59177	59177					0.09042343439477918
RVGCLVGPT	9	Unmodified	_RVGCLVGPT_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.24908447265625	2	451.249837	900.485122	-0.60944	-0.00027501	-1.6864	-0.00076097	-2.2958	-0.001036	451.24890898084885	67.67	1.2739	67.634	67.25	68.524	-0.035698					111	49	3	0	0	0	0.78536	1	6496	6496		29.15	3.6994	1	185140	+		52351	24039	35008	35021	59178	59178					0.0308986222820522
RVGFAAAILAR	11	Unmodified	_RVGFAAAILAR_					0	0	0		ENST00000564629.1_1_16:31470274-31471003:-|nuORF	ENST00000564629.1_1_16:31470274-31471003:-|nuORF	ENST00000564629.1_1_16:31470274-31471003:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	572.8486938476562	2	572.851107	1143.68766	-0.17047	-9.7652E-05	-2.9073	-0.0016655	-3.0778	-0.0017631	572.8493038317292	17.117	0.32895	17.038	16.892	17.221	-0.079056					26	12	3	0	0	0	0.64498	1	193	193		39.253	6.4404	1	167180			52352	13889	35009	35022	59179	59179					0.12156508625116658
RVGFAAAILAR	11	Unmodified	_RVGFAAAILAR_					0	0	0		ENST00000564629.1_1_16:31470274-31471003:-|nuORF	ENST00000564629.1_1_16:31470274-31471003:-|nuORF	ENST00000564629.1_1_16:31470274-31471003:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.8490600585938	2	572.851107	1143.68766	1.0371	0.00059409	-4.1675	-0.0023874	-3.1304	-0.0017933	572.8485650257212	17.146	0.38702	17.064	16.857	17.244	-0.0821					28	15	3	0	0	0	0.48529	1	208	208		52.937	6.9645	1	130280			52353	13889	35009	35022	59180	59180					0.12156508625116658
RVGGIRAN	8	Unmodified	_RVGGIRAN_					0	0	0			REV__ENSG00000140564|ENST00000268171|FURIN	REV__ENSG00000140564|ENST00000268171|FURIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.752197265625	2	421.751393	841.488233	2.0737	0.00087458	-1.681	-0.00070895	0.39271	0.00016563	421.75059831811666	74.567	1.1366	74.612	73.884	75.021	0.04509					66	40	2	0	0	0	0.90465	1	7212	7212		40.573	5.3719	1	116630	+		52354	19632	35010	35023	59181	59181					0.06114873397223164
RVGGIRAN	8	Unmodified	_RVGGIRAN_					0	0	0			REV__ENSG00000140564|ENST00000268171|FURIN	REV__ENSG00000140564|ENST00000268171|FURIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.75146484375	2	421.751393	841.488233	0.52197	0.00022014	-0.4025	-0.00016975	0.11948	5.0389E-05	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.884	1	7136	7136		33.516	0	1	423780	+		52355	19632	35010	35023	59182	59182					0.06114873397223164
RVGGRLGP	8	Unmodified	_RVGGRLGP_					0	0	0		nc|ENSG00000254536|Q6QHF9-4|PAOX	nc|ENSG00000254536|Q6QHF9-4|PAOX	nc|ENSG00000254536|Q6QHF9-4|PAOX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.24859619140625	2	406.248486	810.48242	-1.235	-0.0005017	1.527	0.00062034	0.29202	0.00011863	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.86288	1	10492	10492		26.796	1.3459	1	38125000			52356	15291	35011	35024	59183	59183					0.06959774885558545
RVGGSPRP	8	Unmodified	_RVGGSPRP_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.23675537109375	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.89962	1	6997	6997		38.806	8.3025	1	1692300			52357	15003;5274	35012	35025	59184	59184					0.04243184505901354
RVGLMVQRHL	10	Unmodified	_RVGLMVQRHL_					0	0	0			REV__ENSG00000188037|ENST00000343257|CLCN1	REV__ENSG00000188037|ENST00000343257|CLCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8593139648438	2	604.855867	1207.69718	0.29518	0.00017854	4.3581	0.002636	4.6533	0.0028146	604.8584188713688	80.866	0.85687	81.288	80.891	81.748	0.4215					70	20	4	0	0	0	0.49268	3	9350	9302;9339;9350		44.117	17.424	1	4835500	+		52358	22973	35013	35026	59185;59186;59187	59187					0.10163953639016654
RVGLMVQRHL	10	Unmodified	_RVGLMVQRHL_					0	0	0			REV__ENSG00000188037|ENST00000343257|CLCN1	REV__ENSG00000188037|ENST00000343257|CLCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.859130859375	2	604.855867	1207.69718	0.22273	0.00013472	4.2582	0.0025756	4.481	0.0027103	604.8583327420461	82.105	1.1205	82.531	81.753	82.873	0.42645					96	27	4	0	0	0	0.51401	1	9454	9454		42.396	4.5846	1	3330300	+		52359	22973	35013	35026	59188	59188					0.10163953639016654
RVGLMVQRHL	10	Unmodified	_RVGLMVQRHL_					0	0	0			REV__ENSG00000188037|ENST00000343257|CLCN1	REV__ENSG00000188037|ENST00000343257|CLCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.858642578125	2	604.855867	1207.69718	0.082073	4.9642E-05	4.3287	0.0026183	4.4108	0.0026679	604.8584757159402	82.084	1.3276	82.558	81.718	83.045	0.47383					56	29	2	0	0	0	0.69342	1	9402	9402		40.778	6.6056	1	3105600	+		52360	22973	35013	35026	59189	59189					0.10163953639016654
RVGLMVQRHL	10	Unmodified	_RVGLMVQRHL_					0	0	0			REV__ENSG00000188037|ENST00000343257|CLCN1	REV__ENSG00000188037|ENST00000343257|CLCN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8585815429688	2	604.855867	1207.69718	0.10436	6.3124E-05	4.2568	0.0025748	4.3612	0.0026379	604.8584167241106	82.662	2.6581	83.136	82.878	85.536	0.47383					100	64	2	0	0	0	0.66675	1	9625	9625		42.396	3.6425	1	1770100	+		52361	22973	35013	35026	59190	59190					0.10163953639016654
RVGLSVRHVP	10	Unmodified	_RVGLSVRHVP_					0	0	0		ENST00000503486.6_1_5:178195542-178224582:-|nuORF	ENST00000503486.6_1_5:178195542-178224582:-|nuORF	ENST00000503486.6_1_5:178195542-178224582:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8419189453125	2	560.340907	1118.66726	2.6715	0.0014969	-3.307	-0.001853	-0.63549	-0.00035609	560.338906542098	113.53	0.50379	113.55	113.41	113.92	0.020027					32	20	2	0	0	0	0.85251	1	13705	13705		19.997	2.6318	1	37196			52362	12881	35014	35027	59191	59191					0.11267337965318802
RVGPPWAG	8	Unmodified	_RVGPPWAG_					0	0	0			REV__ENST00000397374.7_1_11:1576814-1577000:-|nuORF	REV__ENST00000397374.7_1_11:1576814-1577000:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.225341796875	2	420.229762	838.444972	-0.18786	-7.8944E-05	-4.4004	-0.0018492	-4.5883	-0.0019281	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.87276	1	7258	7258		29.842	1.5873	1	279000	+		52363	26164	35015	35028	59192	59192					0.019286836199512436
RVGPTILNK	9	Unmodified	_RVGPTILNK_					0	0	0		ENSG00000154803|ENST00000285071|FLCN;ENST00000427497.3_1_17:17110364-17131447:-|nuORF	ENSG00000154803|ENST00000285071|FLCN	ENSG00000154803|ENST00000285071|FLCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.31207275390625	2	499.311284	996.608014	-0.61652	-0.00030784	0.53936	0.00026931	-0.077158	-3.8526E-05	499.3113800220969	32.485	0.55836	32.612	32.375	32.933	0.12643					26	12	3	0	0	0	0.44421	1	2266	2266		54.776	6.8607	1	246860			52364	5297	35016	35029	59193	59193					0.1095744195114321
RVGQLFVI	8	Unmodified	_RVGQLFVI_					0	0	0			REV__ENST00000394524.7_1_4:114374303-114374375:-|nuORF	REV__ENST00000394524.7_1_4:114374303-114374375:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.28948974609375	2	466.28982	930.565087	0.52735	0.0002459	-0.45222	-0.00021086	0.075133	3.5034E-05	466.28951494352106	73.831	0.94804	73.962	73.721	74.669	0.13127					82	37	3	0	0	0	0.84443	1	6795	6795		60.404	0.10967	1	894650	+		52365	26084	35017	35030	59194	59194					0.09702671893705883
RVGQRLTT	8	Unmodified	_RVGQRLTT_					0	0	0			REV__ENSG00000047410|ENST00000367478|TPR	REV__ENSG00000047410|ENST00000367478|TPR	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77734375	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.135	1	80.272	79.772	80.772	0.13702								0	0	0	0.29245	1	7619	7619		30.504	0	1		+		52366	16352	35018	35031	59195	59195					0.07307411740168845
RVGQRLTT	8	Unmodified	_RVGQRLTT_					0	0	0			REV__ENSG00000047410|ENST00000367478|TPR	REV__ENSG00000047410|ENST00000367478|TPR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7767028808594	2	465.777608	929.540663	-1.4399	-0.00067067	1.3241	0.00061674	-0.1158	-5.3938E-05	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.8347	1	7584	7584		23.042	2.0956	1	287800	+		52367	16352	35018	35031	59196	59196					0.07307411740168845
RVGRQLPVIDL	11	Unmodified	_RVGRQLPVIDL_					0	0	0			REV__ENST00000475470.1_1_3:9882101-9883869:-|nuORF	REV__ENST00000475470.1_1_3:9882101-9883869:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5924987792969	3	422.594461	1264.76155	-1.8081	-0.00076411	-2.8568	-0.0012073	-4.665	-0.0019714	422.5931690145651	56.763	1.1935	56.835	56.503	57.696	0.071835					118	57	3	0	0	0	0.74771	1	4805	4805		22.562	1.7244	1	582700	+		52368	27320	35019	35032	59197	59197					0.13976431996798055
RVGSKKVSSA	10	Unmodified	_RVGSKKVSSA_					0	0	0		ENST00000361722.7_1_17:45788245-45788470:+|nuORF	ENST00000361722.7_1_17:45788245-45788470:+|nuORF	ENST00000361722.7_1_17:45788245-45788470:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80352783203125	2	509.803823	1017.59309	-0.89954	-0.00045859	0.77889	0.00039708	-0.12065	-6.1507E-05	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.86471	1	8203	8203		30.318	3.5216	1	1874600			52369	10488	35020	35033	59198	59198					0.08499950083137264
RVGTVIGSNK	10	Unmodified	_RVGTVIGSNK_					0	0	0		ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111590511-111591024:+|nuORF	ENSG00000143799|ENST00000366794|PARP1	ENSG00000143799|ENST00000366794|PARP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8032836914062	2	515.803823	1029.59309	0.78398	0.00040438	-0.88024	-0.00045403	-0.096256	-4.9649E-05	515.8032269783904	23.016	0.76294	22.442	22.157	22.92	-0.57415					45	18	4	0	0	0	0.23224	1	985	985		80.455	3.137	1	679090			52370	4662	35021	35034	59199	59199					0.07947950083121214
RVGVGLFLAS	10	Unmodified	_RVGVGLFLAS_					0	0	0			REV__ENST00000475519.5_1_22:36649981-36653494:+|nuORF	REV__ENST00000475519.5_1_22:36649981-36653494:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8038024902344	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.86718	1	8283	8283		27.882	1.1893	1	1874600	+		52371	17173	35022	35035	59200	59200					0.08902039576832976
RVGVGLFLAS	10	Unmodified	_RVGVGLFLAS_					0	0	0			REV__ENST00000475519.5_1_22:36649981-36653494:+|nuORF	REV__ENST00000475519.5_1_22:36649981-36653494:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8036804199219	2	509.805834	1017.59712	-0.37726	-0.00019233	-3.8339	-0.0019545	-4.2111	-0.0021469	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.86718	1	8423	8423		27.882	0	1	3415500	+		52372	17173	35022	35035	59201	59201					0.08902039576832976
RVGVGLFLAS	10	Unmodified	_RVGVGLFLAS_					0	0	0			REV__ENST00000475519.5_1_22:36649981-36653494:+|nuORF	REV__ENST00000475519.5_1_22:36649981-36653494:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8036804199219	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.86763	1	8355	8355		26.693	0	1	2989000	+		52373	17173	35022	35035	59202	59202					0.08902039576832976
RVHCPIIPK	9	Unmodified	_RVHCPIIPK_					0	0	0		ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8167724609375	2	531.815679	1061.6168	1.0296	0.00054754	1.2167	0.00064705	2.2462	0.0011946	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.74721	2	8816	8744;8816		37.159	9.2769	1	1241100			52374	11038	35023	35036	59203;59204	59204					0.08846092315957321
RVHCPIIPK	9	Unmodified	_RVHCPIIPK_					0	0	0		ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8167114257812	2	531.815679	1061.6168	1.1723	0.00062347	1.0521	0.00055952	2.2244	0.001183	531.8161160627245	88.464	3.7582	88.514	87.467	91.225	0.050415					353	89	5	0	0	0	0.78536	1	8995	8995		29.15	2.3535	1	4413000			52375	11038	35023	35036	59205	59205					0.08846092315957321
RVHCPIIPK	9	Unmodified	_RVHCPIIPK_					0	0	0		ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8167724609375	2	531.815679	1061.6168	-0.053058	-2.8217E-05	2.1137	0.0011241	2.0607	0.0010959	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.77546	1	8449	8449		31.955	2.8053	1	1422300			52376	11038	35023	35036	59206	59206					0.08846092315957321
RVHCPIIPK	9	Unmodified	_RVHCPIIPK_					0	0	0		ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.81689453125	2	531.815679	1061.6168	0.70533	0.00037511	1.4473	0.00076968	2.1526	0.0011448	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.78536	1	8398	8398		29.15	4.9468	1	1163300			52377	11038	35023	35036	59207	59207					0.08846092315957321
RVHCPIIPK	9	Unmodified	_RVHCPIIPK_					0	0	0		ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8169555664062	2	531.815679	1061.6168	0.7269	0.00038658	1.4745	0.00078416	2.2014	0.0011707	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.7932	1	8684	8684		23.042	3.0457	1	4496300			52378	11038	35023	35036	59208	59208					0.08846092315957321
RVHCPIIPK	9	Unmodified	_RVHCPIIPK_					0	0	0		ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	ENST00000393085.3_1_7:135612556-135612649:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.817138671875	2	531.815679	1061.6168	2.0148	0.0010715	0.56824	0.0003022	2.583	0.0013737	531.8159372106508	100.77	1.2932	101.07	100.14	101.44	0.2999					63	31	3	0	0	0	0.78058	1	12217	12217		30.504	3.7075	1	532290			52379	11038	35023	35036	59209	59209					0.08846092315957321
RVHFRLVA	8	Unmodified	_RVHFRLVA_					0	0	0			REV__ENST00000577537.5_1_17:20790991-20791060:+|nuORF	REV__ENST00000577537.5_1_17:20790991-20791060:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.3055725097656	2	499.306336	996.598118	2.5883	0.0012923	-3.6934	-0.0018442	-1.1052	-0.00055182	499.30452757705115	25.928	0.84452	25.497	24.983	25.827	-0.4311					32	19	2	0	0	0	0.88915	1	1396	1396		35.201	1.0282	1	195240	+		52380	29010	35024	35037	59210	59210					0.09968298736407633
RVHKFMER	8	Unmodified	_RVHKFMER_					0	0	0		ENSG00000146085|ENST00000274813|MMUT	ENSG00000146085|ENST00000274813|MMUT	ENSG00000146085|ENST00000274813|MMUT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.2713012695312	2	551.80056	1101.58657	-0.15978	-8.8169E-05	-4.0585	-0.0022395	-4.2183	-0.0023277	552.2999157074111	66.677	0.26012	66.706	66.587	66.847	0.028587					16	11	2	0	0	0	0.4196	1	6300	6300		12.207	0	1	48799			52381	4819	35025	35038	59211	59211					0.03983733650784416
RVHNLLVS	8	Unmodified	_RVHNLLVS_					0	0	0		ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B	ENSG00000008869|ENST00000233099|HEATR5B	ENSG00000008869|ENST00000233099|HEATR5B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	469.2843017578125	2	469.282526	936.550499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.032	1	18.958	18.458	19.458	-0.073704								0	0	0	0.30252	1	377	377		19.36	0	1				52382	751	35026	35039	59212	59212					0.07968599745572646
RVHNTLDS	8	Unmodified	_RVHNTLDS_					0	0	0			REV__ENSG00000198028|ENST00000301480|ZNF560	REV__ENSG00000198028|ENST00000301480|ZNF560	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	471.24273681640625	2	471.243598	940.472643	-1.6339	-0.00076995	2.1497	0.001013	0.51586	0.00024309	471.24439943443156	85.663	2.966	85.821	84.632	87.598	0.15851					150	68	3	0	0	0	0.87064	1	8341	8341		29.15	1.2673	1	239090	+		52383	23288	35027	35040	59213	59213					2.5420895212846517E-05
RVHRGPRP	8	Unmodified	_RVHRGPRP_					0	0	0		ENST00000378052.5_1_7:148991082-148992133:+|nuORF;ENST00000480864.1_1_7:148991400-148992133:+|nuORF;ENST00000476295.5_1_7:148991497-148992133:+|nuORF;ENST00000481519.5_1_7:148990933-148994165:+|nuORF	ENST00000378052.5_1_7:148991082-148992133:+|nuORF	ENST00000378052.5_1_7:148991082-148992133:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.79071044921875	2	487.791384	973.568215	-1.0481	-0.00051127	-0.35408	-0.00017272	-1.4022	-0.00068398	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.86288	2	7885	7885;7913		33.516	2.5934	1	1176800			52384	10855	35028	35041	59214;59215	59214					0.0803735979108069
RVHRGPRP	8	Unmodified	_RVHRGPRP_					0	0	0		ENST00000378052.5_1_7:148991082-148992133:+|nuORF;ENST00000480864.1_1_7:148991400-148992133:+|nuORF;ENST00000476295.5_1_7:148991497-148992133:+|nuORF;ENST00000481519.5_1_7:148990933-148994165:+|nuORF	ENST00000378052.5_1_7:148991082-148992133:+|nuORF	ENST00000378052.5_1_7:148991082-148992133:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7906799316406	2	487.791384	973.568215	0.54992	0.00026825	-2.2918	-0.0011179	-1.7419	-0.00084966	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.80706	1	8356	8356		19.36	1.0356	1	633420			52385	10855	35028	35041	59216	59216					0.0803735979108069
RVHRGPRP	8	Unmodified	_RVHRGPRP_					0	0	0		ENST00000378052.5_1_7:148991082-148992133:+|nuORF;ENST00000480864.1_1_7:148991400-148992133:+|nuORF;ENST00000476295.5_1_7:148991497-148992133:+|nuORF;ENST00000481519.5_1_7:148990933-148994165:+|nuORF	ENST00000378052.5_1_7:148991082-148992133:+|nuORF	ENST00000378052.5_1_7:148991082-148992133:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79071044921875	2	487.791384	973.568215	0.84662	0.00041298	-2.4303	-0.0011855	-1.5836	-0.00077249	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.86288	2	8591	8591;8746		33.516	3.674	1	2238600			52386	10855	35028	35041	59217;59218	59217					0.0803735979108069
RVHRYEESEV	10	Unmodified	_RVHRYEESEV_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.8688049316406	3	435.217831	1302.63166	0.47809	0.00020807	-1.3607	-0.00059222	-0.88264	-0.00038414	435.21783837548736	18.445	0.22855	17.823	17.676	17.905	-0.62141					6	4	2	0	0	0	0.37624	1	398	398		9.6461	0	1	12126			52387	2693	35029	35042	59219	59219					-0.007547890730165818
RVIFNIVN	8	Unmodified	_RVIFNIVN_					0	0	0		ENSG00000186094|ENST00000371839|AGBL4;nc|ENSG00000186094|Q5VU57-2|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7911071777344	2	487.792727	973.5709	-1.0481	-0.00051127	-3.1066	-0.0015154	-4.1547	-0.0020267	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.85277	1	7827	7827		25.45	1.2474	1	1176800			52388	7772	35030	35043	59220	59220					0.08305770405377189
RVIFNIVN	8	Unmodified	_RVIFNIVN_					0	0	0		ENSG00000186094|ENST00000371839|AGBL4;nc|ENSG00000186094|Q5VU57-2|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7906494140625	2	487.792727	973.5709	-1.4694	-0.00071678	-3.0475	-0.0014866	-4.5169	-0.0022033	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.884	1	8138	8138		33.516	5.2613	1	607090			52389	7772	35030	35043	59221	59221					0.08305770405377189
RVIFNIVN	8	Unmodified	_RVIFNIVN_					0	0	0		ENSG00000186094|ENST00000371839|AGBL4;nc|ENSG00000186094|Q5VU57-2|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.79119873046875	2	487.792727	973.5709	-0.24073	-0.00011743	-3.9662	-0.0019347	-4.2069	-0.0020521	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.91005	1	9888	9888		42.474	5.3154	1	1981400			52390	7772	35030	35043	59222	59222					0.08305770405377189
RVIFVVPVPLI	11	Unmodified	_RVIFVVPVPLI_					0	0	0			REV__nc|ENSG00000072041|Q9H2J7-3|SLC6A15	REV__nc|ENSG00000072041|Q9H2J7-3|SLC6A15	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.92242431640625	3	417.944431	1250.81146	-0.18598	-7.7731E-05	3.8959	0.0016283	3.71	0.0015506	417.9463511613286	105.86	0.69099	105.84	105.45	106.14	-0.025146					18	16	2	0	0	0	0.17375	1	11488	11488		24.232	8.225	1	124860	+		52391	16634	35031	35044	59223	59223					0.19609166672762512
RVIGELFKG	9	Unmodified	_RVIGELFKG_					0	0	0			REV__ENST00000524471.1_1_11:124908381-124908994:+|nuORF	REV__ENST00000524471.1_1_11:124908381-124908994:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8037414550781	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.78536	1	8158	8158		29.15	1.2673	1	1874600	+		52392	28161	35032	35045	59224	59224					0.08902039576855714
RVIIAVVLVF	10	Unmodified	_RVIIAVVLVF_					0	0	0		ENSG00000112486|ENST00000341935|CCR6	ENSG00000112486|ENST00000341935|CCR6	ENSG00000112486|ENST00000341935|CCR6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.8789672851562	2	564.878802	1127.74305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.62	1	119.49	118.99	119.99	-0.12704								0	0	0	0.45132	1	14162	14162		12.207	0.69583	1				52393	2664	35033	35046	59225	59225					0.18428922092880384
RVIILVNTPT	10	Unmodified	_RVIILVNTPT_					0	0	0		nc|ENSG00000183715|Q14982-3|OPCML;ENST00000529038.5_1_11:132290089-133402241:-|nuORF;ENSG00000183715|ENST00000524381|OPCML;nc|ENSG00000183715|Q14982|OPCML;nc|ENSG00000183715|Q14982-4|OPCML	nc|ENSG00000183715|Q14982-3|OPCML	nc|ENSG00000183715|Q14982-3|OPCML	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.3505859375	2	563.353148	1124.69174	-1.2875	-0.00072533	-2.3785	-0.0013399	-3.666	-0.0020653	563.3516423395747	95.964	0.97999	96.03	95.589	96.569	0.06591					44	22	2	0	0	0	0.86348	1	10069	10069		31.53	0	1	304430			52394	7553	35034	35047	59226	59226					0.13438553328182934
RVIIPLLKDEG	11	Unmodified	_RVIIPLLKDEG_					0	0	0		ENSG00000145990|ENST00000379287|GFOD1	ENSG00000145990|ENST00000379287|GFOD1	ENSG00000145990|ENST00000379287|GFOD1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.8854370117188	2	626.884813	1251.75507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.31	1	117.25	116.75	117.75	-0.064972								0	0	0	0.56276	1	14023	14023		14.137	5.902	1				52395	4809	35035	35048	59227	59227					0.13926494045426807
RVIKGFSRTR	10	Unmodified	_RVIKGFSRTR_					0	0	0		chr15:74450859-74451301|24|22.5|0.43|5.72|-|0|UBL7,None|1	chr15:74450859-74451301|24|22.5|0.43|5.72|-|0|UBL7,None|1	chr15:74450859-74451301|24|22.5|0.43|5.72|-|0|UBL7,None|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.57989501953125	3	407.250918	1218.73092	2.7169	0.0011065	2.578	0.0010499	5.2949	0.0021564	407.25176575967606	112.19	0.18124	112.17	112.05	112.23	-0.025414					6	4	2	0	0	0	0.37624	1	12392	12392		14.694	6	1	372740			52396	192	35036	35049	59228	59228					0.13030698402394592
RVIPQHQLS	9	Unmodified	_RVIPQHQLS_					0	0	0		ENSG00000162104|ENST00000294016|ADCY9	ENSG00000162104|ENST00000294016|ADCY9	ENSG00000162104|ENST00000294016|ADCY9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.311767578125	2	539.311815	1076.60908	0.18916	0.00010202	-0.2541	-0.00013704	-0.064934	-3.502E-05	539.3115859052693	30.049	0.75069	30.074	29.733	30.483	0.025013					40	18	3	0	0	0	0.64922	1	1521	1521		44.117	3.3386	1	283730			52397	5668	35037	35050	59229	59229					0.07383656320052978
RVIRGPGG	8	Unmodified	_RVIRGPGG_					0	0	0		ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24853515625	2	406.248486	810.48242	1.4359	0.00058334	-0.62428	-0.00025361	0.81164	0.00032973	406.24811193904833	90.886	2.3214	90.819	90.264	92.586	-0.067085					123	55	4	0	0	0	0.86288	1	9547	9547		26.796	0	1	1147600			52398	13043	35038	35051	59230	59230					0.06959774885569914
RVIRGPGG	8	Unmodified	_RVIRGPGG_					0	0	0		ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2486572265625	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.55	1	113.52	113.02	114.02	-0.024811								0	0	0	0.30004	1	12564	12564		21.702	2.3424	1				52399	13043	35038	35051	59231	59231					0.06959774885569914
RVIRGPGG	8	Unmodified	_RVIRGPGG_					0	0	0		ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2484436035156	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.68	1	113.65	113.15	114.15	-0.024811								0	0	0	0.29353	1	12581	12581		28.254	0	1				52400	13043	35038	35051	59232	59232					0.06959774885569914
RVIRGPGG	8	Unmodified	_RVIRGPGG_					0	0	0		ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2486267089844	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.81724	2	9071	9071;9291		29.842	3.0454	1	56664000			52401	13043	35038	35051	59233;59234	59233					0.06959774885569914
RVIRGPGG	8	Unmodified	_RVIRGPGG_					0	0	0		ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2485046386719	2	406.248486	810.48242	3.1803	0.001292	-2.4584	-0.00099873	0.7219	0.00029327	406.2473607643489	90.704	2.3213	90.75	90.262	92.583	0.046448					123	55	3	0	0	0	0.81724	2	9435	9422;9435		21.702	0	1	1081600			52402	13043	35038	35051	59235;59236	59236					0.06959774885569914
RVIRGPGG	8	Unmodified	_RVIRGPGG_					0	0	0		ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	ENST00000512982.2_1_5:39126184-39127873:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2484436035156	2	406.248486	810.48242	-1.9274	-0.00078302	2.2431	0.00091126	0.31566	0.00012824	406.2493147377016	111.43	0.80137	111.41	111.05	111.85	-0.019882					56	30	2	0	0	0	0.81548	1	11902	11902		20.482	1.1219	1	107510			52403	13043	35038	35051	59237	59237					0.06959774885569914
RVIVQLHK	8	Unmodified	_RVIVQLHK_					0	0	0		ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	496.82012939453125	2	496.821818	991.629084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.936	1	58.046	57.546	58.546	0.11027								0	0	0	0.29631	1	4921	4921		25.45	0	1				52404	5588	35039	35052	59238	59238					0.13293452050641008
RVIVTKNEP	9	Unmodified	_RVIVTKNEP_					0	0	0			REV__nc|ENSG00000171100|Q13496-2|MTM1	REV__nc|ENSG00000171100|Q13496-2|MTM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.314208984375	2	528.314023	1054.61349	1.2423	0.00065632	-1.2033	-0.0006357	0.039025	2.0617E-05	528.3135537689813	98.237	1.3537	98.285	97.706	99.06	0.048164					68	30	3	0	0	0	0.64922	3	10520	10484;10508;10520		44.117	1.4457	1	423330	+		52405	21710	35040	35053	59239;59240;59241	59241					0.08837120742964544
RVIVTKNEP	9	Unmodified	_RVIVTKNEP_					0	0	0			REV__nc|ENSG00000171100|Q13496-2|MTM1	REV__nc|ENSG00000171100|Q13496-2|MTM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3126220703125	2	528.314023	1054.61349	-1.5228	-0.00080452	1.9442	0.0010272	0.42141	0.00022264	528.3151474868954	98.282	1.1905	98.478	97.935	99.126	0.19585					48	26	2	0	0	0	0.44421	1	10125	10125		54.776	8.8244	1	327210	+		52406	21710	35040	35053	59242	59242					0.08837120742964544
RVIVTTSV	8	Unmodified	_RVIVTTSV_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7713317871094	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.83058	1	3019	3019		12.959	0.75233	1	9763800	+		52407	23227	35041	35054	59243	59243					0.0865437527713766
RVIWSWKLLR	10	Unmodified	_RVIWSWKLLR_					0	0	0			REV__ENST00000421745.6_1_2:32640331-32640415:+|nuORF	REV__ENST00000421745.6_1_2:32640331-32640415:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.94842529296875	3	452.946946	1355.81901	0.75693	0.00034285	2.1961	0.00099472	2.953	0.0013376	452.94782570061545	106.9	1.1199	106.99	106.6	107.72	0.091255					115	26	5	0	0	0	0.8492	1	11491	11491		18.531	2.0012	1	5690500	+		52408	26500	35042	35055	59244	59244					0.1553331899301611
RVKANRKG	8	Unmodified	_RVKANRKG_					0	0	0		chr10:27675410-27675521|22|23.5|0.52|5.49|-|2|None,MKX|1	chr10:27675410-27675521|22|23.5|0.52|5.49|-|2|None,MKX|1	chr10:27675410-27675521|22|23.5|0.52|5.49|-|2|None,MKX|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.79022216796875	2	464.793592	927.572632	-1.9025	-0.00088428	-4.2508	-0.0019758	-6.1534	-0.00286	464.7914872059108	34.459	1.5924	34.459	34.009	35.601	0					104	42	3	0	0	0	0.86288	1	1923	1923		26.796	0	1	277220			52409	71	35043	35056	59245	59245					0.1059482421399025
RVKARSVP	8	Unmodified	_RVKARSVP_					0	0	0		ENSG00000198218|ENST00000395443|QRICH1	ENSG00000198218|ENST00000395443|QRICH1	ENSG00000198218|ENST00000395443|QRICH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7912292480469	2	456.790518	911.566484	0.18235	8.3295E-05	3.5287	0.0016119	3.7111	0.0016952	456.79200220887	40.258	1.2138	40.227	39.65	40.864	-0.030987					94	32	4	0	0	0	0.91005	1	2858	2858		42.474	3.6683	1	1159000			52410	8257	35044	35057	59246	59246					0.10716305982464291
RVKDPNSGLPK	11	Unmodified	_RVKDPNSGLPK_					0	0	0		ENST00000458579.5_1_7:44091436-44097592:+|nuORF;nc|ENSG00000136279|Q9UJU6-6|DBNL;ENSG00000136279|ENST00000448521|DBNL;nc|ENSG00000136279|Q9UJU6-2|DBNL;nc|ENSG00000136279|Q9UJU6-3|DBNL	ENST00000458579.5_1_7:44091436-44097592:+|nuORF	ENST00000458579.5_1_7:44091436-44097592:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.23455810546875	3	404.234933	1209.68297	1.8134	0.00073306	-0.057621	-2.3293E-05	1.7558	0.00070977	404.23433017015464	22.713	0.83821	22.295	21.97	22.808	-0.41879					50	19	5	0	0	0	0.52015	2	957	945;957		50.484	4.5754	1	221200			52411	4103	35045	35058	59247;59248	59248					0.08651579691695588
RVKDPNSGLPK	11	Unmodified	_RVKDPNSGLPK_					0	0	0		ENST00000458579.5_1_7:44091436-44097592:+|nuORF;nc|ENSG00000136279|Q9UJU6-6|DBNL;ENSG00000136279|ENST00000448521|DBNL;nc|ENSG00000136279|Q9UJU6-2|DBNL;nc|ENSG00000136279|Q9UJU6-3|DBNL	ENST00000458579.5_1_7:44091436-44097592:+|nuORF	ENST00000458579.5_1_7:44091436-44097592:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.23504638671875	3	404.234933	1209.68297	0.32179	0.00013008	0.34574	0.00013976	0.66753	0.00026984	404.2349641058868	22.759	0.71555	22.148	21.823	22.539	-0.6107					45	17	4	0	0	0	0.60817	1	952	952		43.501	4.7872	1	300260			52412	4103	35045	35058	59249	59249					0.08651579691695588
RVKGGRLS	8	Unmodified	_RVKGGRLS_					0	0	0		ENST00000366513.8_3_1:246829226-246829310:+|nuORF	ENST00000366513.8_3_1:246829226-246829310:+|nuORF	ENST00000366513.8_3_1:246829226-246829310:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.77410888671875	2	436.774868	871.535184	-0.34985	-0.00015281	-2.9642	-0.0012947	-3.314	-0.0014475	436.77383375696394	27.418	1.1225	27.379	27.041	28.164	-0.038523					45	25	2	0	0	0	0.80959	1	1330	1330		15.642	1.8665	1	85606			52413	10507	35046	35059	59250	59250					0.09427732948381617
RVKGIPFR	8	Unmodified	_RVKGIPFR_					0	0	0		ENSG00000099899|ENST00000252136|TRMT2A;ENST00000404751.7_2_22:20100088-20100440:-|nuORF;ENST00000487668.5_1_22:20100088-20100349:-|nuORF;ENST00000480339.1_1_22:20100088-20100591:-|nuORF;ENST00000487378.1_1_22:20100088-20100785:-|nuORF	ENSG00000099899|ENST00000252136|TRMT2A	ENSG00000099899|ENST00000252136|TRMT2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.2538146972656	2	486.808711	971.602869	-0.76387	-0.00037186	-0.88131	-0.00042903	-1.6452	-0.00080088	486.8081990403797	28.385	0.65706	28.288	28.011	28.669	-0.096945					24	15	2	0	0	0	0.4196	1	1759	1759		24.203	0	1	96551			52414	1774	35047	35060	59251	59251					0.11593182879175856
RVKGIPLL	8	Unmodified	_RVKGIPLL_					0	0	0			REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.30804443359375	2	448.308013	894.601472	0.8972	0.00040222	-0.74663	-0.00033472	0.15057	6.75E-05	448.30748115009004	81.031	1.822	81.087	80.118	81.94	0.055916					78	45	3	0	0	0	0.83466	1	8053	8053		23.037	7.4005	1	196950	+		52415	27567	35048	35061	59252	59252					0.14995548790420798
RVKGIPLL	8	Unmodified	_RVKGIPLL_					0	0	0			REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.30810546875	2	448.308013	894.601472	0.040774	1.8279E-05	0.012791	5.7345E-06	0.053566	2.4014E-05	448.3078723892815	79.698	1.7809	80.247	79.234	81.015	0.54945					88	41	3	0	0	0	0.83466	1	9163	9163		23.037	1.3344	1	769040	+		52416	27567	35048	35061	59253	59253					0.14995548790420798
RVKGIPLL	8	Unmodified	_RVKGIPLL_					0	0	0			REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	448.308013	894.601472	0.8972	0.00040222	-0.74663	-0.00033472	0.15057	6.75E-05	448.30748115009004	81.031	1.822	81.087	80.118	81.94	0.055916	0.076564	-0.00101	NaN	23.037	78	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	196950	+		52417	27567	35048	35061							0.14995548790420798
RVKGIPLL	8	Unmodified	_RVKGIPLL_					0	0	0			REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	448.308013	894.601472	-1.3081	-0.00058644	1.4011	0.00062811	0.092949	4.167E-05	448.3084614181635	80.809	0.8908	80.946	80.289	81.18	0.13702	-0.065092	0.00091565	NaN	23.037	51	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164460	+		52418	27567	35048	35061							0.14995548790420798
RVKGIPLL	8	Unmodified	_RVKGIPLL_					0	0	0			REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	448.308013	894.601472	0.57067	0.00025584	-0.33337	-0.00014945	0.23731	0.00010639	448.30764437033434	80.755	0.81017	80.899	80.387	81.197	0.14352	-0.11217	-0.00063948	NaN	23.037	43	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139940	+		52419	27567	35048	35061							0.14995548790420798
RVKGIPLL	8	Unmodified	_RVKGIPLL_					0	0	0			REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	REV__ENST00000487054.1_1_1:225605673-225607031:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	448.308013	894.601472	-1.5406	-0.00069066	1.6287	0.00073017	0.088124	3.9507E-05	448.3086164455487	81.006	1.0556	81.112	80.635	81.691	0.10526	0.1007	0.0011198	NaN	23.037	40	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164580	+		52420	27567	35048	35061							0.14995548790420798
RVKGLVESN	9	Unmodified	_RVKGLVESN_					0	0	0			REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2921447753906	2	501.290548	1000.56654	-0.97974	-0.00049113	0.89004	0.00044617	-0.089695	-4.4963E-05	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.77696	1	8128	8128		31.53	2.3803	1	2111000	+		52421	28623	35049	35062	59254	59254					0.06628261191804086
RVKGLVESN	9	Unmodified	_RVKGLVESN_					0	0	0			REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2905578613281	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.76764	3	8703	8667;8703;8883		34.173	4.331	1	9565500	+		52422	28623	35049	35062	59255;59256;59257	59256					0.06628261191804086
RVKGLVESN	9	Unmodified	_RVKGLVESN_					0	0	0			REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29034423828125	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.78124	1	8742	8742		30.318	1.1682	1	2850500	+		52423	28623	35049	35062	59258	59258					0.06628261191804086
RVKGLVESN	9	Unmodified	_RVKGLVESN_					0	0	0			REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2904052734375	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.77244	1	9173	9173		32.812	2.3088	1	9883700	+		52424	28623	35049	35062	59259	59259					0.06628261191804086
RVKGLVESN	9	Unmodified	_RVKGLVESN_					0	0	0			REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2903747558594	2	501.290548	1000.56654	-0.36653	-0.00018374	0.15869	7.9552E-05	-0.20784	-0.00010419	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.73802	1	8753	8753		37.812	0.65241	1	9903700	+		52425	28623	35049	35062	59260	59260					0.06628261191804086
RVKGLVESN	9	Unmodified	_RVKGLVESN_					0	0	0			REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2906188964844	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.67345	2	8391	8391;8438		42.396	10.866	1	9566900	+		52426	28623	35049	35062	59261;59262	59261					0.06628261191804086
RVKGLVESN	9	Unmodified	_RVKGLVESN_					0	0	0			REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2904357910156	2	501.290548	1000.56654	-1.5697	-0.00078686	1.3648	0.00068414	-0.20492	-0.00010273	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.77696	2	8349	8349;8385		31.53	3.6476	1	9242300	+		52427	28623	35049	35062	59263;59264	59263					0.06628261191804086
RVKGLVESN	9	Unmodified	_RVKGLVESN_					0	0	0			REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	REV__ENST00000552391.1_1_12:49424296-49425140:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29010009765625	2	501.290548	1000.56654	-0.45423	-0.0002277	0.14645	7.3413E-05	-0.30779	-0.00015429	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.71772	1	10168	10168		39.253	0	1	9727400	+		52428	28623	35049	35062	59265	59265					0.06628261191804086
RVKGQRDGH	9	Unmodified	_RVKGQRDGH_					0	0	0		ENST00000309890.11_1_17:3827865-3828672:-|nuORF	ENST00000309890.11_1_17:3827865-3828672:-|nuORF	ENST00000309890.11_1_17:3827865-3828672:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8079223632812	2	526.789038	1051.56352	2.1751	0.0011458	4.4481	0.0023432	6.6232	0.003489	526.7913791013976	100.99	0.1625	101.29	101.21	101.37	0.2999					5	3	2	0	0	0	0.20789	1	12244	12244		68.787	15.435	1	84842			52429	9901	35050	35063	59266	59266					0.039804308576549374
RVKGWFLLD	9	Unmodified	_RVKGWFLLD_					0	0	0		ENST00000485336.5_1_6:53155264-53213696:-|nuORF;ENSG00000012660|ENST00000304434|ELOVL5;nc|ENSG00000012660|Q9NYP7-2|ELOVL5	ENST00000485336.5_1_6:53155264-53213696:-|nuORF	ENST00000485336.5_1_6:53155264-53213696:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3299560546875	2	567.326934	1132.63931	0.79571	0.00045143	4.1414	0.0023495	4.9371	0.0028009	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.77546	1	9319	9319		31.955	3.8734	1	18145000			52430	802	35051	35064	59267	59267					0.07830014985211164
RVKKGMRVS	9	Unmodified	_RVKKGMRVS_					0	0	0			REV__nc|ENSG00000115896|Q15111-2|PLCL1	REV__nc|ENSG00000115896|Q15111-2|PLCL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.821044921875	2	530.824035	1059.63352	-0.07706	-4.0905E-05	-4.3528	-0.0023106	-4.4299	-0.0023515	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.78983	1	7593	7593		27.882	2.3082	1	1032800	+		52431	18159	35052	35065	59268	59268					0.10608593201914118
RVKKIHRRVLK	11	Unmodified	_RVKKIHRRVLK_					0	0	0		chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	chr15:66500176-66500274|20|16.2|0.25|5.99|-|1|RPL4,None|1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.3271179199219	3	478.328161	1431.96265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.68	1	72.23	71.73	72.73	0.55008								0	0	0	0.56276	1	8018	8018		3.026	1.794	1				52432	190	35053	35066	59269	59269					0.26395165823964817
RVKLLIGP	8	Unmodified	_RVKLLIGP_					0	0	0		ENSG00000111859|ENST00000379446|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9;nc|ENSG00000111859|Q14511-2|NEDD9;ENST00000448183.6_1_6:11200558-11306280:-|nuORF	ENSG00000111859|ENST00000379446|NEDD9;ENST00000448183.6_1_6:11200558-11306280:-|nuORF	ENSG00000111859|ENST00000379446|NEDD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.3077087402344	2	448.308013	894.601472	-0.81848	-0.00036693	0.83217	0.00037307	0.013688	6.1366E-06	448.30828378299327	79.858	1.6959	80.274	79.317	81.013	0.41621					76	39	2	0	0	0	0.80706	1	9143	9143		19.36	3.7238	1	808240			52433	2617;11855	35054	35067	59270	59270					0.14995548790432167
RVKLPSGSKK	10	Unmodified	_RVKLPSGSKK_					0	0	0		ENST00000430538.1_1_21:31635868-31636186:-|nuORF;ENST00000525232.5_1_8:146016635-146016902:-|nuORF;ENSG00000161016|ENST00000528957|RPL8	ENST00000430538.1_1_21:31635868-31636186:-|nuORF;ENST00000525232.5_1_8:146016635-146016902:-|nuORF	ENST00000525232.5_1_8:146016635-146016902:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3508911132812	2	550.35094	1098.68733	-0.13237	-7.2852E-05	0.048023	2.6429E-05	-0.08435	-4.6422E-05	550.3508827027325	18.018	1.0361	17.535	17.035	18.071	-0.48256					58	22	4	0	0	0	0.12134	3	319	319;329;341		98.582	39.8	1	1122100			52434	11636;5626	35055	35068	59271;59272;59273	59271					0.14193088905290097
RVKLPSGSKK	10	Unmodified	_RVKLPSGSKK_					0	0	0		ENST00000430538.1_1_21:31635868-31636186:-|nuORF;ENST00000525232.5_1_8:146016635-146016902:-|nuORF;ENSG00000161016|ENST00000528957|RPL8	ENST00000430538.1_1_21:31635868-31636186:-|nuORF;ENST00000525232.5_1_8:146016635-146016902:-|nuORF	ENST00000525232.5_1_8:146016635-146016902:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3509521484375	2	550.35094	1098.68733	0.10491	5.774E-05	-0.18223	-0.00010029	-0.077316	-4.2551E-05	550.3507908580577	18.188	0.96065	17.566	17.023	17.983	-0.62141					52	22	3	0	0	0	0.015963	4	365	333;341;353;365		126.24	30.052	1	1316100			52435	11636;5626	35055	35068	59274;59275;59276;59277	59277					0.14193088905290097
RVKMVVPK	8	Unmodified	_RVKMVVPK_					0	0	0			REV__ENST00000481488.1_1_2:148695657-148695951:-|nuORF	REV__ENST00000481488.1_1_2:148695657-148695951:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8051452636719	2	478.807322	955.600092	-1.2024	-0.0005757	-0.89347	-0.0004278	-2.0958	-0.0010035	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.79929	1	2778	2778		18.324	0.95945	1	361300	+		52436	27443	35056	35069	59278	59278					0.12051591430019926
RVKQRINTY	9	Unmodified	_RVKQRINTY_					0	0	0		ENST00000519559.1_1_8:52732913-52752014:-|nuORF;nc|ENSG00000168300|Q96MG8-2|PCMTD1;ENSG00000168300|ENST00000522514|PCMTD1	ENST00000519559.1_1_8:52732913-52752014:-|nuORF	ENST00000519559.1_1_8:52732913-52752014:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3424072265625	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.78058	1	9436	9436		30.504	0.18592	1	17904000			52437	6390	35057	35070	59279	59279					0.09147016757151505
RVKRFSLLLDP	11	Unmodified	_RVKRFSLLLDP_					0	0	0		ENST00000314028.10_1_17:80200842-80200935:-|nuORF	ENST00000314028.10_1_17:80200842-80200935:-|nuORF	ENST00000314028.10_1_17:80200842-80200935:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.6089172363281	3	448.610111	1342.8085	-0.12449	-5.5849E-05	-1.5935	-0.00071488	-1.718	-0.00077073	448.94365307156517	77.124	0.95989	77.076	76.709	77.669	-0.048264					104	45	3	0	0	0	0.77205	1	7642	7642		17.167	1.16	1	533170			52438	9959	35058	35071	59280	59280					0.1508129154794915
RVKRKARL	8	Unmodified	_RVKRKARL_					0	0	0			REV__ENSG00000050030|ENST00000055682|NEXMIF	REV__ENSG00000050030|ENST00000055682|NEXMIF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7706909179688	2	513.853984	1025.69342	0.17705	9.0978E-05	-3.7609	-0.0019325	-3.5838	-0.0018416	513.8522141116596	51.786	0.41954	52.221	52.033	52.452	0.43505					12	9	2	0	0	0	0.4196	1	5138	5138		33.516	11.813	1	159750	+		52439	16374	35059	35072	59281	59281					0.18159651927453524
RVKRPSPE	8	Unmodified	_RVKRPSPE_					0	0	0		nc|ENSG00000122778|Q9HCM3-2|KIAA1549;ENSG00000122778|ENST00000422774|KIAA1549;nc|ENSG00000122778|Q9HCM3-3|KIAA1549;nc|ENSG00000122778|Q9HCM3-4|KIAA1549	nc|ENSG00000122778|Q9HCM3-2|KIAA1549	nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.286376953125	2	484.785433	967.556313	-1.1421	-0.00055367	1.9636	0.00095194	0.82152	0.00039826	484.78789018167805	41.476	1.8948	41.435	40.856	42.751	-0.04081					148	48	4	0	0	0	0.884	1	3171	3171		33.516	3.0119	1	1666200			52440	3245	35060	35073	59282	59282					0.07123698257237265
RVKRPSPE	8	Unmodified	_RVKRPSPE_					0	0	0		nc|ENSG00000122778|Q9HCM3-2|KIAA1549;ENSG00000122778|ENST00000422774|KIAA1549;nc|ENSG00000122778|Q9HCM3-3|KIAA1549;nc|ENSG00000122778|Q9HCM3-4|KIAA1549	nc|ENSG00000122778|Q9HCM3-2|KIAA1549	nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.2872314453125	2	484.785433	967.556313	-2.6464	-0.0012829	3.5931	0.0017419	0.94673	0.00045896	484.78861378184325	41.582	2.0114	41.585	40.8	42.811	0.0034142					135	50	4	0	0	0	0.89962	1	3158	3158		38.806	0	1	1266400			52441	3245	35060	35073	59283	59283					0.07123698257237265
RVKRRPLNVN	10	Unmodified	_RVKRRPLNVN_					0	0	0			REV__nc|ENSG00000114805|Q4KWH8|PLCH1	REV__nc|ENSG00000114805|Q4KWH8|PLCH1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.92242431640625	3	417.930067	1250.76837	0.73389	0.00030672	3.5123	0.0014679	4.2462	0.0017746	417.9313793828079	105.49	0.15122	105.6	105.51	105.66	0.10766					5	3	2	0	0	0	0.37624	1	11242	11242		11.097	0	1	284480	+		52442	29793	35061	35074	59284	59284					0.15301789668046695
RVKRTLSD	8	Unmodified	_RVKRTLSD_					0	0	0			REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.79119873046875	2	487.790715	973.566878	-0.085473	-4.1693E-05	-0.089202	-4.3512E-05	-0.17467	-8.5205E-05	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.89494	1	8591	8591		37.159	1.5408	1	1889700	+		52443	21562	35062	35075	59285	59285					0.07903680911670108
RVKRTLSD	8	Unmodified	_RVKRTLSD_					0	0	0			REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7906188964844	2	487.790715	973.566878	0.84663	0.00041298	-1.0594	-0.00051676	-0.21277	-0.00010379	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.89494	1	8579	8579		37.159	8.0096	1	2238600	+		52444	21562	35062	35075	59286	59286					0.07903680911670108
RVKRTLSD	8	Unmodified	_RVKRTLSD_					0	0	0			REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7906799316406	2	487.790715	973.566878	-1.3135	-0.00064074	1.1066	0.00053979	-0.20694	-0.00010094	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.84341	2	8502	8502;8573		31.955	3.7006	1	2239000	+		52445	21562	35062	35075	59287;59288	59287					0.07903680911670108
RVKRTLSD	8	Unmodified	_RVKRTLSD_					0	0	0			REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7906494140625	2	487.790715	973.566878	-0.71211	-0.00034736	0.24728	0.00012062	-0.46484	-0.00022674	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.90983	1	7934	7934		42.396	11.892	1	678280	+		52446	21562	35062	35075	59289	59289					0.07903680911670108
RVKRTLSD	8	Unmodified	_RVKRTLSD_					0	0	0			REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.79058837890625	2	487.790715	973.566878	-0.70733	-0.00034503	0.46293	0.00022581	-0.2444	-0.00011922	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.91472	1	8094	8094		44.117	6.9577	1	2348200	+		52447	21562	35062	35075	59290	59290					0.07903680911670108
RVKRTLSD	8	Unmodified	_RVKRTLSD_					0	0	0			REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.79071044921875	2	487.790715	973.566878	0.6235	0.00030414	-1.3362	-0.00065176	-0.71266	-0.00034763	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.87922	1	7891	7891		31.955	0.42505	1	479320	+		52448	21562	35062	35075	59291	59291					0.07903680911670108
RVKRTLSD	8	Unmodified	_RVKRTLSD_					0	0	0			REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.790771484375	2	487.790715	973.566878	-1.5393	-0.00075085	1.3207	0.00064423	-0.21857	-0.00010661	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.87064	1	8260	8260		29.15	0.89528	1	1760400	+		52449	21562	35062	35075	59292	59292					0.07903680911670108
RVKRTLSD	8	Unmodified	_RVKRTLSD_					0	0	0			REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	REV__nc|ENSG00000169224|Q5JQS6-2|GCSAML	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.79022216796875	2	487.790715	973.566878	-0.24073	-0.00011743	0.15721	7.6687E-05	-0.083519	-4.074E-05	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.88601	1	9948	9948		34.173	0	1	1981400	+		52450	21562	35062	35075	59293	59293					0.07903680911670108
RVKRWARHV	9	Unmodified	_RVKRWARHV_					0	0	0			REV__ENST00000482108.1_2_7:94285731-94285779:+|nuORF	REV__ENST00000482108.1_2_7:94285731-94285779:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3700561523438	2	604.36779	1206.72103	-0.12671	-7.6581E-05	-1.2807	-0.000774	-1.4074	-0.00085058	604.3667576937121	114.61	2.863	114.64	114.11	116.97	0.026466					110	87	2	0	0	0	0.7932	1	12583	12583		11.511	0.64546	1	97003	+		52451	27458	35063	35076	59294	59294					0.12593555187686434
RVKSEGQVPT	10	Unmodified	_RVKSEGQVPT_					0	0	0		ENST00000462379.1_1_1:2435075-2436649:+|nuORF;nc|ENSG00000149527|O75038-3|PLCH2;ENSG00000149527|ENST00000378486|PLCH2	ENST00000462379.1_1_1:2435075-2436649:+|nuORF	ENST00000462379.1_1_1:2435075-2436649:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.8068237304688	2	550.806562	1099.59857	-1.5611	-0.00085986	1.7466	0.00096206	0.18555	0.0001022	550.8073038939729	29.672	1.5276	29.666	29.02	30.547	-0.0064812					96	34	5	0	0	0	0.86587	1	1868	1868		29.17	4.9382	1	1060600			52452	5033	35064	35077	59295	59295					0.05275628874960603
RVKSKPAN	8	Unmodified	_RVKSKPAN_					0	0	0			REV__nc|ENSG00000189007|Q7Z6V5-2|ADAT2	REV__nc|ENSG00000189007|Q7Z6V5-2|ADAT2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2724304199219	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.31	1	112.28	111.78	112.78	-0.025414								0	0	0	0.29245	1	12408	12408		30.504	7.4612	1		+		52453	23055	35065	35078	59296	59296					0.08152313228515595
RVKSTGKTSY	10	Unmodified	_RVKSTGKTSY_					0	0	0			REV__ENST00000473071.1_1_17:37899536-37900469:+|nuORF	REV__ENST00000473071.1_1_17:37899536-37900469:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.8171997070312	2	563.814387	1125.61422	-0.2788	-0.00015719	2.9242	0.0016487	2.6454	0.0014915	563.815891101307	46.136	0.83967	47.038	46.454	47.294	0.90241					46	20	3	0	0	0	0.47091	1	4367	4367		58.23	6.8945	1	981990	+		52454	27277	35066	35079	59297	59297					0.056439153920109675
RVKTAMAGVK	10	Unmodified	_RVKTAMAGVK_					0	0	0		ENSG00000131620|ENST00000355303|ANO1;nc|ENSG00000131620|Q5XXA6-5|ANO1	ENSG00000131620|ENST00000355303|ANO1	ENSG00000131620|ENST00000355303|ANO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.8204345703125	2	530.818418	1059.62228	1.1117	0.00059012	3.6242	0.0019238	4.736	0.0025139	530.8202358745281	82.61	1.5277	82.544	82.018	83.546	-0.066185					83	35	4	0	0	0	0.86272	1	8398	8398		24.519	1.4767	1	1339600			52455	3738	35067	35080	59298	59298					0.09485771107779328
RVKTAMAGVK	10	Unmodified	_RVKTAMAGVK_					0	0	0		ENSG00000131620|ENST00000355303|ANO1;nc|ENSG00000131620|Q5XXA6-5|ANO1	ENSG00000131620|ENST00000355303|ANO1	ENSG00000131620|ENST00000355303|ANO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8206176757812	2	530.818418	1059.62228	0.64668	0.00034327	4.0768	0.002164	4.7235	0.0025073	530.8205589668217	80.04	1.1775	80.181	79.815	80.992	0.14118					115	43	3	0	0	0	0.86587	1	7663	7663		29.17	0	1	892800			52456	3738	35067	35080	59299	59299					0.09485771107779328
RVKTNEKGT	9	Unmodified	_RVKTNEKGT_					0	0	0		MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|161|1|anti-sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|161|1|anti-sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|161|1|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7938842773438	2	516.793455	1031.57236	-0.27075	-0.00013992	0.23047	0.00011911	-0.040282	-2.0817E-05	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.55097	1	8738	8738		49.442	1.7842	1	817800			52457	14709	35068	35081	59300	59300					0.05783359703491442
RVKTNEKGT	9	Unmodified	_RVKTNEKGT_					0	0	0		MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|161|1|anti-sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|161|1|anti-sense	MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|161|1|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7932739257812	2	516.793455	1031.57236	0.70992	0.00036688	-0.71288	-0.00036841	-0.0029593	-1.5293E-06	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.7932	1	8854	8854		25.574	0	1	842420			52458	14709	35068	35081	59301	59301					0.05783359703491442
RVKTNLPIFK	10	Unmodified	_RVKTNLPIFK_					0	0	0		nc|ENSG00000112335|O60493-3|SNX3;ENSG00000112335|ENST00000230085|SNX3	nc|ENSG00000112335|O60493-3|SNX3	nc|ENSG00000112335|O60493-3|SNX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.92388916015625	3	405.923919	1214.74993	-0.21574	-8.7574E-05	-0.37333	-0.00015154	-0.58907	-0.00023912	405.9237800414302	39.717	1.4413	40.085	39.258	40.699	0.36797					77	34	3	0	0	0	0.53481	1	3311	3311		53.597	13.539	1	392920			52459	2657	35069	35082	59302	59302					0.15114234973452767
RVKTNLPIFK	10	Unmodified	_RVKTNLPIFK_					0	0	0		nc|ENSG00000112335|O60493-3|SNX3;ENSG00000112335|ENST00000230085|SNX3	nc|ENSG00000112335|O60493-3|SNX3	nc|ENSG00000112335|O60493-3|SNX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.9241943359375	3	405.923919	1214.74993	-0.83063	-0.00033717	1.138	0.00046194	0.30738	0.00012477	405.9243380306791	38.596	0.70305	39.119	38.75	39.453	0.52235					49	16	4	0	0	0	0.3872	1	3190	3190		65.157	21.506	1	1038200			52460	2657	35069	35082	59303	59303					0.15114234973452767
RVKTNLPIFK	10	Unmodified	_RVKTNLPIFK_					0	0	0		nc|ENSG00000112335|O60493-3|SNX3;ENSG00000112335|ENST00000230085|SNX3	nc|ENSG00000112335|O60493-3|SNX3	nc|ENSG00000112335|O60493-3|SNX3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	405.923919	1214.74993	0.48608	0.00019731	-0.24952	-0.00010128	0.23656	9.6025E-05	405.92371710757396	38.7	0.53425	39.042	38.697	39.232	0.34187	-0.038177	-0.0012735	NaN	65.157	32	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	433800			52461	2657	35069	35082							0.15114234973452767
RVKVKLLQRSI	11	Unmodified	_RVKVKLLQRSI_					0	0	0		ENST00000518711.1_1_8:48641465-48642165:+|nuORF;nc|ENSG00000164808|Q14159-2|SPIDR;ENSG00000164808|ENST00000297423|SPIDR	ENST00000518711.1_1_8:48641465-48642165:+|nuORF	ENST00000518711.1_1_8:48641465-48642165:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2729797363281	3	447.301389	1338.88234	-1.2906	-0.0005773	0.79019	0.00035345	-0.50042	-0.00022384	447.30235493003084	106.66	0.39151	106.8	106.52	106.91	0.14843					10	8	2	0	0	0	0.17996	1	11418	11418		12.433	0.50046	1	86633			52462	6005	35070	35083	59304	59304					0.22645259710270693
RVKYGKYV	8	Unmodified	_RVKYGKYV_					0	0	0			REV__nc|ENSG00000119509|Q9Y283-2|INVS	REV__nc|ENSG00000119509|Q9Y283-2|INVS	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.80010986328125	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.829	1	53.767	53.267	54.267	-0.062065								0	0	0	0.29498	1	4424	4424		26.796	2.5934	1		+		52463	18355	35071	35084	59305	59305					0.08122056922422871
RVLAGRGGG	9	Unmodified	_RVLAGRGGG_					0	0	0			REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.751220703125	2	421.751393	841.488233	0.52197	0.00022014	-0.4025	-0.00016975	0.11948	5.0389E-05	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.72402	1	7238	7238		38.806	1.647	1	423780	+		52464	28373	35072	35085	59306	59306					0.0611487339725727
RVLAKAIGQRR	11	Unmodified	_RVLAKAIGQRR_					0	0	0			REV__ENSG00000144035|ENST00000272425|NAT8	REV__ENSG00000144035|ENST00000272425|NAT8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	423.5975341796875	3	423.273834	1266.79967	-1.8715	-0.00079214	-2.0489	-0.00086725	-3.9204	-0.0016594	423.2716918932955	105.63	0.23067	105.7	105.61	105.84	0.073112					6	5	2	0	0	0	0.17521	1	11194	11194		17.167	6.07	1	35475	+		52465	19867	35073	35086	59307	59307					0.17694362702127364
RVLDERLVRL	10	Unmodified	_RVLDERLVRL_					0	0	0		nc|ENSG00000125735|O43557-2|TNFSF14;ENSG00000125735|ENST00000675206|TNFSF14	nc|ENSG00000125735|O43557-2|TNFSF14	nc|ENSG00000125735|O43557-2|TNFSF14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	423.59771728515625	3	423.598094	1267.77245	2.7179	0.0011513	-3.8029	-0.0016109	-1.0849	-0.00045958	423.5963997730453	105.86	2.6165	105.82	105.15	107.76	-0.037148					224	61	5	0	0	0	0.8651	2	11728	11728;11765		27.047	10.517	1	6994400			52466	3412	35074	35087	59308;59309	59308					0.14927834371087556
RVLDERLVRL	10	Unmodified	_RVLDERLVRL_					0	0	0		nc|ENSG00000125735|O43557-2|TNFSF14;ENSG00000125735|ENST00000675206|TNFSF14	nc|ENSG00000125735|O43557-2|TNFSF14	nc|ENSG00000125735|O43557-2|TNFSF14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5979919433594	3	423.598094	1267.77245	2.8995	0.0012282	-3.9608	-0.0016778	-1.0614	-0.0004496	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.86718	1	11624	11624		26.063	3.4837	1	6928400			52467	3412	35074	35087	59310	59310					0.14927834371087556
RVLEKSPGK	9	Unmodified	_RVLEKSPGK_					0	0	0		nc|ENSG00000169057|P51608|MECP2;ENSG00000169057|ENST00000453960|MECP2	nc|ENSG00000169057|P51608|MECP2	nc|ENSG00000169057|P51608|MECP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.3089904785156	2	507.308741	1012.60293	-0.73911	-0.00037496	0.84418	0.00042826	0.10507	5.3304E-05	507.3090651329104	28.358	0.65179	28.261	27.974	28.626	-0.096947					38	15	3	0	0	0	0.71772	1	1700	1700		39.253	2.2244	1	309510			52468	6465	35075	35088	59311	59311					0.09713138088534379
RVLELIPQIAN	11	Unmodified	_RVLELIPQIAN_					0	0	0		ENST00000491987.1_1_22:35723272-35729230:+|nuORF;ENST00000404284.6_1_22:35717823-35727385:+|nuORF;nc|ENSG00000100284|O60784-3|TOM1;nc|ENSG00000100284|O60784-4|TOM1;ENST00000424387.5_1_22:35695884-35743199:+|nuORF;ENSG00000100284|ENST00000449058|TOM1;nc|ENSG00000100284|O60784-2|TOM1	ENST00000491987.1_1_22:35723272-35729230:+|nuORF	ENST00000491987.1_1_22:35723272-35729230:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59246826171875	3	422.590717	1264.75032	0.27263	0.00011521	4.3666	0.0018453	4.6392	0.0019605	422.5924825344156	49.575	1.8502	49.617	48.754	50.604	0.04224					166	47	4	0	0	0	0.75457	1	3887	3887		21.032	1.7696	1	2165700			52469	1819	35076	35089	59312	59312					0.12853609902686003
RVLFPRVPL	9	Unmodified	_RVLFPRVPL_					0	0	0		ENST00000588572.6_3_19:55865056-55865797:-|nuORF	ENST00000588572.6_3_19:55865056-55865797:-|nuORF	ENST00000588572.6_3_19:55865056-55865797:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.843505859375	2	548.853119	1095.69168	-2.5899	-0.0014215	2.6734	0.0014673	0.083585	4.5876E-05	548.8543980416836	41.913	1.1773	42.327	41.973	43.151	0.4139					63	29	3	0	0	0	0.77546	1	3695	3695		31.955	5.1588	1	1406900			52470	14214	35077	35090	59313	59313					0.14766598118831098
RVLGCRRDH	9	Unmodified	_RVLGCRRDH_					0	0	0		ENST00000468768.1_1_2:208615415-208618419:+|nuORF	ENST00000468768.1_1_2:208615415-208618419:+|nuORF	ENST00000468768.1_1_2:208615415-208618419:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.2977294921875	2	556.298716	1110.58288	-0.90792	-0.00050507	0.19403	0.00010794	-0.71389	-0.00039714	556.2986094820882	75.928	0.56037	75.977	75.736	76.296	0.049194					26	15	2	0	0	0	0.76255	1	7315	7315		35.618	0	1	142750			52471	12185	35078	35091	59314	59314					0.03201063876917942
RVLGGRPG	8	Unmodified	_RVLGGRPG_					0	0	0		ENST00000468467.5_1_2:25194335-25194404:-|nuORF	ENST00000468467.5_1_2:25194335-25194404:-|nuORF	ENST00000468467.5_1_2:25194335-25194404:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2482604980469	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.6	1	116.58	116.08	117.08	-0.014999								0	0	0	0.29568	1	13982	13982		35.201	5.3592	1				52472	12179	35079	35092	59315	59315					0.06959774885558545
RVLGLLRSQR	10	Unmodified	_RVLGLLRSQR_					0	0	0			REV__ENSG00000204084|ENST00000373024|INPP5B	REV__ENSG00000204084|ENST00000373024|INPP5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3802490234375	2	599.380563	1196.74657	0.97491	0.00058434	-1.8328	-0.0010985	-0.85787	-0.00051419	599.3792959797308	103.23	2.9032	103.41	102.97	105.87	0.18297					219	73	5	0	0	0	0.86763	1	10945	10945		26.693	0	1	22539000	+		52473	23454	35080	35093	59316	59316					0.15606984919440947
RVLGTRALL	9	Unmodified	_RVLGTRALL_					0	0	0		ENST00000573331.5_1_17:7297739-7306647:-|nuORF	ENST00000573331.5_1_17:7297739-7306647:-|nuORF	ENST00000573331.5_1_17:7297739-7306647:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	499.8264465332031	2	499.827101	997.639649	-0.25611	-0.00012801	0.42976	0.0002148	0.17364	8.6791E-05	499.82722061420077	19.808	0.39669	19.738	19.583	19.979	-0.069735					19	12	2	0	0	0	0.7932	1	477	477		17.365	2.7009	1	81978			52474	14019	35081	35094	59317	59317					0.14073434705096588
RVLHAISR	8	Unmodified	_RVLHAISR_					0	0	0		nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	nc|ENSG00000153827|Q14669|TRIP12	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.3076171875	2	476.295968	950.577383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.746	1	27.814	27.314	28.314	0.06868								0	0	0	0.30079	1	1120	1120		20.947	3.582	1				52475	5245	35082	35095	59318	59318					0.10011708356739746
RVLILCTS	8	Unmodified	_RVLILCTS_					0	0	0		ENST00000437106.1_1_21:37541270-37541486:-|nuORF	ENST00000437106.1_1_21:37541270-37541486:-|nuORF	ENST00000437106.1_1_21:37541270-37541486:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.76837158203125	2	452.767863	903.521173	-1.6999	-0.00076965	3.2319	0.0014633	1.532	0.00069366	452.76922459739603	29.888	2.1263	29.917	28.5	30.627	0.028618					94	48	4	0	0	0	0.85277	1	1941	1941		25.45	0.94616	1	831070			52476	11731	35083	35096	59319	59319					0.06555319405072169
RVLKAPLA	8	Unmodified	_RVLKAPLA_					0	0	0		ENSG00000092067|ENST00000206513|CEBPE	ENSG00000092067|ENST00000206513|CEBPE	ENSG00000092067|ENST00000206513|CEBPE	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25152587890625	2	434.292362	866.570172	-1.2935	-0.00056177	1.6401	0.00071229	0.34657	0.00015051	434.29301505905886	80.424	0.85458	80.424	79.905	80.76	0					53	34	3	0	0	0	0.4196	1	7405	7405		28.254	7.7724	1	152970			52477	1689	35084	35097	59320	59320					0.13154975756310705
RVLKGVNKLPP	11	Unmodified	_RVLKGVNKLPP_					0	0	0		ENSG00000010932|ENST00000617670|FMO1;nc|ENSG00000010932|Q01740-2|FMO1	ENSG00000010932|ENST00000617670|FMO1	ENSG00000010932|ENST00000617670|FMO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.3983764648438	2	610.895515	1219.77648	-0.14883	-9.0917E-05	0.81473	0.00049771	0.6659	0.0004068	611.3978289757457	60.767	0.17879	61.32	61.18	61.359	0.55323					5	4	2	0	0	0	0.76699	1	6481	6481		18.262	0.79408	1	662810			52478	775	35085	35098	59321	59321					0.1753792386477926
RVLKKNPLK	9	Unmodified	_RVLKKNPLK_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.3740234375	2	548.371675	1094.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.152	1	37.091	36.591	37.591	-0.060333								0	0	0	0.34024	1	2102	2102		17.365	0.89182	1				52479	6934	35086	35099	59322	59322					0.18522269664572377
RVLLILVIGVA	11	Unmodified	_RVLLILVIGVA_					0	0	0			REV__nc|ENSG00000163082|Q8IWX5-2|SGPP2	REV__nc|ENSG00000163082|Q8IWX5-2|SGPP2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.4096069335938	2	583.405184	1164.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.246	1	69.793	69.293	70.293	0.54693								0	0	0	0.56276	1	7666	7666		15.642	0.77694	1		+		52480	20879	35087	35100	59323	59323					0.2200088015572419
RVLLPSEAP	9	Unmodified	_RVLLPSEAP_					0	0	0			REV__ENST00000271640.9_1_1:150935480-150935609:+|nuORF	REV__ENST00000271640.9_1_1:150935480-150935609:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.2885437011719	2	491.290017	980.565481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.327	1	47.364	46.864	47.864	0.037731								0	0	0	0.31472	1	3536	3536		25.45	0	1		+		52481	24535	35088	35101	59324	59324					0.07442046822893644
RVLLQRRQRLP	11	Unmodified	_RVLLQRRQRLP_					0	0	0			REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3081970214844	3	478.975788	1433.90553	-1.5808	-0.00075714	-0.99267	-0.00047547	-2.5734	-0.0012326	478.9752399041666	51.639	1.4994	51.639	50.814	52.314	0					68	39	2	0	0	0	0.8498	1	4215	4215		6.001	0	1	107410	+		52482	27838	35089	35102	59325	59325					0.2059369854760007
RVLLQRRQRLP	11	Unmodified	_RVLLQRRQRLP_					0	0	0			REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97344970703125	3	478.975788	1433.90553	-1.0377	-0.00049701	-2.8379	-0.0013593	-3.8755	-0.0018563	478.97440370036395	43.258	1.9554	43.222	42.189	44.144	-0.035816					117	46	4	0	0	0	0.79224	1	3501	3501		12.957	4.5502	1	472330	+		52483	27838	35089	35102	59326	59326					0.2059369854760007
RVLLQRRQRLP	11	Unmodified	_RVLLQRRQRLP_					0	0	0			REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97418212890625	3	478.975788	1433.90553	0.30578	0.00014646	-2.6417	-0.0012653	-2.3359	-0.0011188	478.97445511920006	47.863	1.3107	47.901	47.243	48.554	0.037731					72	41	3	0	0	0	0.81219	1	3647	3647		8.7993	0	1	244030	+		52484	27838	35089	35102	59327	59327					0.2059369854760007
RVLLQRRQRLP	11	Unmodified	_RVLLQRRQRLP_					0	0	0			REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9750061035156	3	478.975788	1433.90553	0.32204	0.00015425	-2.7165	-0.0013011	-2.3944	-0.0011469	478.97440184285665	49.517	2.8707	49.559	48.485	51.356	0.04224					148	77	3	0	0	0	0.7896	2	3793	3793;3979		13.508	1.0751	1	307830	+		52485	27838	35089	35102	59328;59329	59328					0.2059369854760007
RVLLQRRQRLP	11	Unmodified	_RVLLQRRQRLP_					0	0	0			REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.30841064453125	3	478.975788	1433.90553	0.34157	0.0001636	-2.911	-0.0013943	-2.5694	-0.0012307	478.9743151753571	51.804	1.1678	51.863	51.373	52.541	0.059719					70	37	2	0	0	0	0.80593	2	4200	4180;4200		10.104	0.8921	1	347520	+		52486	27838	35089	35102	59330;59331	59331					0.2059369854760007
RVLLQRRQRLP	11	Unmodified	_RVLLQRRQRLP_					0	0	0			REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9745788574219	3	478.975788	1433.90553	0.35245	0.00016881	-3.2435	-0.0015536	-2.8911	-0.0013847	478.9741095971511	52.816	1.6716	52.886	52.36	54.032	0.070713					123	47	3	0	0	0	0.81021	1	4426	4426		9.2118	1.1774	1	295530	+		52487	27838	35089	35102	59332	59332					0.2059369854760007
RVLLQRRQRLP	11	Unmodified	_RVLLQRRQRLP_					0	0	0			REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9750061035156	3	478.975788	1433.90553	-0.315	-0.00015088	-2.2657	-0.0010852	-2.5807	-0.0012361	478.9746652956354	49.514	1.8124	49.42	48.44	50.252	-0.093178					109	43	3	0	0	0	0.8498	1	3880	3880		6.001	0	1	294110	+		52488	27838	35089	35102	59333	59333					0.2059369854760007
RVLLQRRQRLP	11	Unmodified	_RVLLQRRQRLP_					0	0	0			REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	REV__ENST00000503078.5_1_5:176943632-176943958:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.9734802246094	3	478.975788	1433.90553	-0.6074	-0.00029093	-3.2624	-0.0015626	-3.8698	-0.0018535	478.97420725254665	42.857	1.6177	43.291	42.605	44.223	0.4334					121	39	4	0	0	0	0.81219	1	3887	3887		8.7993	0	1	1394900	+		52489	27838	35089	35102	59334	59334					0.2059369854760007
RVLLSGLQVAR	11	Unmodified	_RVLLSGLQVAR_					0	0	0			REV__ENSG00000112584|ENST00000476287|FAM120B	REV__ENSG00000112584|ENST00000476287|FAM120B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.5882873535156	3	404.59094	1210.75099	-1.8671	-0.00075542	-3.2179	-0.0013019	-5.0851	-0.0020574	404.58952264006433	41.149	1.3462	41.149	40.379	41.725	0					65	43	2	0	0	0	0.68431	1	2770	2770		34.087	2.4522	1	159110	+		52490	17955	35090	35103	59335	59335					0.15404449342349835
RVLLVEPAS	9	Unmodified	_RVLLVEPAS_					0	0	0			REV__nc|ENSG00000110171|O75382-4|TRIM3	REV__nc|ENSG00000110171|O75382-4|TRIM3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7957763671875	2	492.297842	982.581131	-1.4727	-0.00072503	0.88668	0.00043651	-0.58605	-0.00028851	492.29821652018575	54.106	1.1337	54.106	53.63	54.763	0					64	35	3	0	0	0	0.20789	1	4466	4466		44.117	0	1	266120	+		52491	17801	35091	35104	59336	59336					0.08914333339942004
RVLLWRYT	8	Unmodified	_RVLLWRYT_					0	0	0		nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8302612304688	2	553.827101	1105.63965	1.287	0.00071279	4.2616	0.0023602	5.5486	0.003073	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.86288	1	9566	9566		26.796	6.3143	1	5348100			52492	4441	35092	35105	59337	59337					0.09105434705065818
RVLMYKGK	8	Unmodified	_RVLMYKGK_					0	0	0			REV__ENSG00000175264|ENST00000308064|CHST1	REV__ENSG00000175264|ENST00000308064|CHST1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.7960510253906	2	497.796955	993.579357	-1.2593	-0.00062688	-0.71711	-0.00035698	-1.9764	-0.00098385	497.79616758279207	48.708	1.9058	48.709	47.99	49.896	0.00017166					121	43	4	0	0	0	0.80706	1	4085	4085		19.36	0	1	500820	+		52493	22054	35093	35106	59338	59338					0.08231001050342002
RVLNLEYNQL	10	Unmodified	_RVLNLEYNQL_					0	0	0		ENSG00000240720|ENST00000458448|LRRD1	ENSG00000240720|ENST00000458448|LRRD1	ENSG00000240720|ENST00000458448|LRRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.2337951660156	3	421.234822	1260.68264	-1.8464	-0.00077775	1.6108	0.00067852	-0.23556	-9.9227E-05	421.23541419897134	44.357	0.75468	44.365	44.009	44.764	0.0084534					41	17	4	0	0	0	0.73395	1	3114	3114		42.864	5.0528	1	300450			52494	8783	35094	35107	59339	59339					0.06272159971854308
RVLPYPFTH	9	Unmodified	_RVLPYPFTH_					0	0	0		ENSG00000156697|ENST00000394422|UTP14A;nc|ENSG00000156697|Q9BVJ6-3|UTP14A;nc|ENSG00000156697|Q9BVJ6-2|UTP14A	ENSG00000156697|ENST00000394422|UTP14A	ENSG00000156697|ENST00000394422|UTP14A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.3125	2	565.311284	1128.60801	0.14177	8.0145E-05	0.067819	3.8339E-05	0.20959	0.00011848	565.3112167790975	52.055	1.0354	52.478	51.894	52.93	0.42348					42	24	3	0	0	0	0.38563	1	5216	5216		58.782	7.5893	1	828160			52495	5389	35095	35108	59340	59340					0.048854419511371816
RVLPYPFTH	9	Unmodified	_RVLPYPFTH_					0	0	0		ENSG00000156697|ENST00000394422|UTP14A;nc|ENSG00000156697|Q9BVJ6-3|UTP14A;nc|ENSG00000156697|Q9BVJ6-2|UTP14A	ENSG00000156697|ENST00000394422|UTP14A	ENSG00000156697|ENST00000394422|UTP14A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	565.311284	1128.60801	1.0715	0.00060572	-1.0901	-0.00061624	-0.018601	-1.0515E-05	565.310351571232	51.68	1.0655	52.348	51.733	52.799	0.66729	-0.065473	-0.00087135	NaN	58.782	50	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	729250			52496	5389	35095	35108							0.048854419511371816
RVLQKKPDLI	10	Unmodified	_RVLQKKPDLI_					0	0	0			REV__ENSG00000137770|ENST00000260327|CTDSPL2	REV__ENSG00000137770|ENST00000260327|CTDSPL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.9300842285156	3	403.92744	1208.76049	2.3249	0.0009391	3.1739	0.001282	5.4989	0.0022211	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.85259	1	3928	3928		20.03	4.6974	1	2948200	+		52497	15615	35096	35109	59341	59341					0.16446217627890292
RVLQKKPDLI	10	Unmodified	_RVLQKKPDLI_					0	0	0			REV__ENSG00000137770|ENST00000260327|CTDSPL2	REV__ENSG00000137770|ENST00000260327|CTDSPL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.92950439453125	3	403.92744	1208.76049	0.5143	0.00020774	4.1381	0.0016715	4.6524	0.0018792	403.92898888715627	45.158	1.872	45.621	44.495	46.367	0.46313					165	45	4	0	0	0	0.85259	2	4232	4232;4245		20.03	1.4994	1	5214800	+		52498	15615	35096	35109	59342;59343	59342					0.16446217627890292
RVLQLEKQNS	10	Unmodified	_RVLQLEKQNS_					0	0	0		nc|ENSG00000083535|Q8WXW3-2|PIBF1;ENSG00000083535|ENST00000326291|PIBF1	nc|ENSG00000083535|Q8WXW3-2|PIBF1	nc|ENSG00000083535|Q8WXW3-2|PIBF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.8985595703125	3	405.566571	1213.67788	-1.5858	-0.00064316	-3.0129	-0.0012219	-4.5987	-0.0018651	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.85259	1	5263	5263		20.03	1.4994	1	181560			52499	1502	35097	35110	59344	59344					0.07959275829102808
RVLRAGDWNL	10	Unmodified	_RVLRAGDWNL_					0	0	0		ENST00000372706.5_1_1:40944843-40944963:+|nuORF	ENST00000372706.5_1_1:40944843-40944963:+|nuORF	ENST00000372706.5_1_1:40944843-40944963:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	600.3331909179688	2	600.335821	1198.65709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.814	1	94.013	93.513	94.513	0.19827								0	0	0	0.45132	1	9499	9499		37.812	0.30334	1				52500	10714	35098	35111	59345	59345					0.06570730240082412
RVLRLARGRRR	11	Unmodified	_RVLRLARGRRR_					0	0	0			REV__ENST00000542643.6_1_1:21923469-21929393:-|nuORF	REV__ENST00000542643.6_1_1:21923469-21929393:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.30780029296875	3	470.311393	1407.91235	-1.0845	-0.00051006	0.9313	0.000438	-0.15322	-7.206E-05	470.3118043400699	16.431	0.36591	16.479	16.402	16.767	0.047802					29	15	3	0	0	0	0.81021	1	165	165		9.2118	0	1	178620	+		52501	25792	35099	35112	59346	59346					0.22471056218796548
RVLSFPRAM	9	Unmodified	_RVLSFPRAM_					0	0	0			REV__ENST00000569436.6_1_16:67881116-67881206:+|nuORF	REV__ENST00000569436.6_1_16:67881116-67881206:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.806396484375	2	538.805311	1075.59607	2.2674	0.0012217	0.29427	0.00015855	2.5616	0.0013802	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.76255	1	9440	9440		35.618	1.4457	1	835060	+		52502	28913	35100	35113	59347	59347					0.061295019362887615
RVLSSGRSL	9	Unmodified	_RVLSSGRSL_					0	0	0		ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7906799316406	2	487.790715	973.566878	-1.0481	-0.00051127	1.0168	0.00049598	-0.03133	-1.5283E-05	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.7932	1	7950	7950		25.574	0	1	1176800			52503	4244	35101	35114	59348	59348					0.07903680911670108
RVLTDKRQ	8	Unmodified	_RVLTDKRQ_					0	0	0			REV__nc|ENSG00000137261|Q5VV43-4|KIAA0319	REV__nc|ENSG00000137261|Q5VV43-4|KIAA0319	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.30755615234375	2	508.30399	1014.59343	1.0227	0.00051987	-1.7665	-0.00089794	-0.7438	-0.00037807	508.30304455517893	17.675	0.33471	17.061	16.883	17.217	-0.61425					14	8	2	0	0	0	0.87479	1	285	285		30.504	3.8107	1	67894	+		52504	19372	35102	35115	59349	59349					0.08671369802993922
RVLTDKRQ	8	Unmodified	_RVLTDKRQ_					0	0	0			REV__nc|ENSG00000137261|Q5VV43-4|KIAA0319	REV__nc|ENSG00000137261|Q5VV43-4|KIAA0319	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	508.30399	1014.59343	1.0227	0.00051987	-1.7665	-0.00089794	-0.7438	-0.00037807	508.30304455517893	17.675	0.33471	17.061	16.883	17.217	-0.61425	0.022822	-0.00022824	NaN	30.504	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67894	+		52505	19372	35102	35115							0.08671369802993922
RVLTNHIHTG	10	Unmodified	_RVLTNHIHTG_					0	0	0		nc|ENSG00000100462|O14744-3|PRMT5;nc|ENSG00000100462|O14744-5|PRMT5;nc|ENSG00000100462|O14744-2|PRMT5;ENSG00000100462|ENST00000324366|PRMT5	nc|ENSG00000100462|O14744-3|PRMT5	nc|ENSG00000100462|O14744-3|PRMT5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.3197631835938	2	574.320171	1146.62579	1.0954	0.0006291	-2.2738	-0.0013059	-1.1784	-0.00067678	574.3187099892803	94.307	4.5457	94.353	93.159	97.704	0.046173					261	107	4	0	0	0	0.86348	1	9931	9931		31.53	1.2121	1	1593500			52506	1841	35103	35116	59350	59350					0.058341572059816826
RVLTSLVS	8	Unmodified	_RVLTSLVS_					0	0	0		ENST00000527982.1_1_11:252432-252597:+|nuORF	ENST00000527982.1_1_11:252432-252597:+|nuORF	ENST00000527982.1_1_11:252432-252597:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77142333984375	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.84341	1	2218	2218		24.203	6.8378	1	1041500			52507	13294	35104	35117	59351	59351					0.0865437527713766
RVLVGFFDPP	10	Unmodified	_RVLVGFFDPP_					0	0	0			REV__ENSG00000127580|ENST00000293883|WDR24	REV__ENSG00000127580|ENST00000293883|WDR24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	573.8150634765625	2	573.818941	1145.62333	0.2907	0.00016681	-3.6159	-0.0020749	-3.3252	-0.001908	573.816753391891	35.956	1.0187	36.059	35.47	36.489	0.10306					84	33	4	0	0	0	0.85934	1	1930	1930		35.618	1.4457	1	933610	+		52508	18742	35105	35118	59352	59352					0.0563430874833557
RVLVIRAGRG	10	Unmodified	_RVLVIRAGRG_					0	0	0			REV__nc|ENSG00000162746|Q6BAA4-3|FCRLB	REV__nc|ENSG00000162746|Q6BAA4-3|FCRLB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.8496704101562	2	548.856724	1095.69889	-2.5898	-0.0014215	-3.8954	-0.002138	-6.4852	-0.0035594	548.8543980416836	41.913	1.1773	42.327	41.973	43.151	0.4139					63	29	3	0	0	0	0.85466	1	3712	3712		20.947	0.95016	1	1406900	+		52509	29975	35106	35119	59353	59353					0.15487330719247439
RVLVVKLLSIL	11	Unmodified	_RVLVVKLLSIL_					0	0	0		ENSG00000172954|ENST00000379509|LCLAT1;nc|ENSG00000172954|Q6UWP7|LCLAT1	ENSG00000172954|ENST00000379509|LCLAT1	ENSG00000172954|ENST00000379509|LCLAT1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.2970275878906	3	418.295353	1251.86423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.236	1	75.631	75.131	76.131	0.39507								0	0	0	0.56276	1	8503	8503		6.001	2.5923	1				52510	6808	35107	35120	59354	59354					0.2483712473556352
RVMIKGKP	8	Unmodified	_RVMIKGKP_					0	0	0		nc|ENSG00000129295|Q86X45-2|DNAAF11;ENSG00000129295|ENST00000620350|DNAAF11	nc|ENSG00000129295|Q86X45-2|DNAAF11	nc|ENSG00000129295|Q86X45-2|DNAAF11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7913818359375	2	464.791672	927.568792	-1.6424	-0.00076336	-0.52072	-0.00024202	-2.1631	-0.0010054	464.79130074195194	36.947	2.0594	36.958	35.753	37.812	0.011173					99	45	3	0	0	0	0.87922	1	2382	2382		31.955	14.59	1	317960			52511	3582	35108	35121	59355	59355					0.1021101839593257
RVMIKGKP	8	Unmodified	_RVMIKGKP_					0	0	0		nc|ENSG00000129295|Q86X45-2|DNAAF11;ENSG00000129295|ENST00000620350|DNAAF11	nc|ENSG00000129295|Q86X45-2|DNAAF11	nc|ENSG00000129295|Q86X45-2|DNAAF11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7895812988281	2	464.791672	927.568792	0.17035	7.9177E-05	-2.224	-0.0010337	-2.0536	-0.00095451	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.884	1	1697	1697		33.516	6.7195	1	283920			52512	3582	35108	35121	59356	59356					0.1021101839593257
RVMKALVNR	9	Unmodified	_RVMKALVNR_					0	0	0		ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF	ENSG00000149136|ENST00000278412|SSRP1	ENSG00000149136|ENST00000278412|SSRP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.831298828125	2	543.83186	1085.64917	1.9635	0.0010678	-2.2152	-0.0012047	-0.25167	-0.00013687	543.8304776635812	25.036	0.87354	24.522	24.235	25.109	-0.51365					25	19	2	0	0	0	0.78058	1	1269	1269		30.504	3.8107	1	142150			52513	5000	35109	35122	59357	59357					0.10976879718964483
RVMPLSKPV	9	Unmodified	_RVMPLSKPV_					0	0	0		nc|ENSG00000130294|Q12756-2|KIF1A;ENSG00000130294|ENST00000498729|KIF1A;nc|ENSG00000130294|Q12756|KIF1A	nc|ENSG00000130294|Q12756-2|KIF1A	nc|ENSG00000130294|Q12756-2|KIF1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8079833984375	2	513.810062	1025.60557	0.090876	4.6693E-05	-2.2226	-0.001142	-2.1317	-0.0010953	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.78983	1	4241	4241		27.882	2.4321	1	1448700			52514	3630	35110	35123	59358	59358					0.09379270221825209
RVMPVLKSP	9	Unmodified	_RVMPVLKSP_					0	0	0		ENSG00000135222|ENST00000353151|CSN2	ENSG00000135222|ENST00000353151|CSN2	ENSG00000135222|ENST00000353151|CSN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8095703125	2	513.810062	1025.60557	-0.30203	-0.00015519	-1.7325	-0.00089016	-2.0345	-0.0010453	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.78536	1	4197	4197		29.15	4.9468	1	861580			52515	3993	35111	35124	59359	59359					0.09379270221802471
RVNELKGK	8	Unmodified	_RVNELKGK_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	REV__nc|ENSG00000138688|Q2LD37-4|BLTP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2882080078125	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.89494	1	10204	10204		37.159	0	1	48696000	+		52516	19496	35112	35125	59360	59360					0.0874858239999412
RVNILGFSI	9	Unmodified	_RVNILGFSI_					0	0	0		ENSG00000149403|ENST00000527524|GRIK4;ENST00000533291.5_1_11:120531027-120833419:+|nuORF	ENSG00000149403|ENST00000527524|GRIK4	ENSG00000149403|ENST00000527524|GRIK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8034973144531	2	509.805834	1017.59712	-0.054339	-2.7702E-05	-4.0902	-0.0020852	-4.1445	-0.0021129	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.74721	1	8812	8812		37.159	1.5408	1	2906900			52517	5022	35113	35126	59361	59361					0.08902039576844345
RVNILGFSI	9	Unmodified	_RVNILGFSI_					0	0	0		ENSG00000149403|ENST00000527524|GRIK4;ENST00000533291.5_1_11:120531027-120833419:+|nuORF	ENSG00000149403|ENST00000527524|GRIK4	ENSG00000149403|ENST00000527524|GRIK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8036193847656	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.74721	1	8428	8428		37.159	1.5408	1	2989000			52518	5022	35113	35126	59362	59362					0.08902039576844345
RVNILGFSI	9	Unmodified	_RVNILGFSI_					0	0	0		ENSG00000149403|ENST00000527524|GRIK4;ENST00000533291.5_1_11:120531027-120833419:+|nuORF	ENSG00000149403|ENST00000527524|GRIK4	ENSG00000149403|ENST00000527524|GRIK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8034973144531	2	509.805834	1017.59712	0.31699	0.0001616	-4.4775	-0.0022826	-4.1605	-0.002121	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.67345	1	10107	10107		42.396	12.078	1	2635100			52519	5022	35113	35126	59363	59363					0.08902039576844345
RVNIVKGN	8	Unmodified	_RVNIVKGN_					0	0	0		ENSG00000108021|ENST00000695737|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27362060546875	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.24	1	114.22	113.72	114.72	-0.024452								0	0	0	0.29452	1	12654	12654		33.516	6.7195	1				52520	2388	35114	35127	59364	59364					0.08152313228515595
RVNKAPKMR	9	Unmodified	_RVNKAPKMR_					0	0	0		ENST00000461464.1_1_4:57576495-57576777:+|nuORF	ENST00000461464.1_1_4:57576495-57576777:+|nuORF	ENST00000461464.1_1_4:57576495-57576777:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.3278198242188	2	550.329485	1098.64442	-0.4914	-0.00027043	-3.8309	-0.0021083	-4.3223	-0.0023787	550.3274966608972	100.46	1.192	100.46	99.887	101.08	0					71	27	3	0	0	0	0.76255	1	10224	10224		35.618	2.8059	1	339490			52521	12025	35115	35128	59365	59365					0.09903995576178204
RVNKSPTKDS	10	Unmodified	_RVNKSPTKDS_					0	0	0			REV__nc|ENSG00000107282|Q02410-2|APBA1	REV__nc|ENSG00000107282|Q02410-2|APBA1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	566.3118896484375	2	566.309469	1130.60439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.18	1	116.1	115.6	116.6	-0.074318								0	0	0	0.45132	1	12494	12494		16.717	2.5803	1		+		52522	17653	35116	35129	59366	59366					0.04430727386625222
RVNLNVLREAV	11	Unmodified	_RVNLNVLREAV_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.882568359375	2	641.883136	1281.75172	-0.046992	-3.0164E-05	-0.94307	-0.00060534	-0.99006	-0.0006355	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.70737	1	9982	9982		30.318	5.7985	1	2217900			52523	4393	35117	35130	59367	59367					0.12211243991418996
RVNLNVLREAV	11	Unmodified	_RVNLNVLREAV_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8826293945312	2	641.883136	1281.75172	-0.050339	-3.2311E-05	-0.91447	-0.00058698	-0.96481	-0.0006193	641.8823954757748	95.916	2.4458	95.982	94.508	96.954	0.06591					198	57	4	0	0	0	0.68532	1	10159	10159		33.922	7.2287	1	1572400			52524	4393	35117	35130	59368	59368					0.12211243991418996
RVNLNVLREAV	11	Unmodified	_RVNLNVLREAV_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.882568359375	2	641.883136	1281.75172	-0.050098	-3.2157E-05	-0.96956	-0.00062234	-1.0197	-0.0006545	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.7144	2	10383	10383;10481		29.17	4.6509	1	3644700			52525	4393	35117	35130	59369;59370	59369					0.12211243991418996
RVNLNVLREAV	11	Unmodified	_RVNLNVLREAV_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8818969726562	2	641.883136	1281.75172	1.9607	0.0012585	-3.025	-0.0019417	-1.0643	-0.00068315	641.8810415769531	95.839	2.2822	95.782	94.474	96.756	-0.057526					187	53	4	0	0	0	0.62614	1	10333	10333		41.427	11.109	1	1600600			52526	4393	35117	35130	59371	59371					0.12211243991418996
RVNLNVLREAV	11	Unmodified	_RVNLNVLREAV_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8817138671875	2	641.883136	1281.75172	1.6835	0.0010806	-2.7242	-0.0017486	-1.0407	-0.00066802	641.8812254430574	95.773	2.4493	95.82	94.333	96.782	0.046989					202	57	5	0	0	0	0.6921	2	10165	10165;10177		32.812	7.2384	1	1550900			52527	4393	35117	35130	59372;59373	59372					0.12211243991418996
RVNLNVLREAV	11	Unmodified	_RVNLNVLREAV_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8831176757812	2	641.883136	1281.75172	1.6823	0.0010798	-2.7332	-0.0017544	-1.051	-0.00067461	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.74763	1	10556	10556		22.58	3.2197	1	3772700			52528	4393	35117	35130	59374	59374					0.12211243991418996
RVNLNVLREAV	11	Unmodified	_RVNLNVLREAV_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8826293945312	2	641.883136	1281.75172	0.89498	0.00057447	-2.058	-0.001321	-1.163	-0.00074653	641.8816647321656	95.707	2.6304	95.87	94.248	96.878	0.16316					218	62	4	0	0	0	0.72106	2	9920	9920;9934		28.081	3.5623	1	2156900			52529	4393	35117	35130	59375;59376	59375					0.12211243991418996
RVNLNVLREAV	11	Unmodified	_RVNLNVLREAV_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8824462890625	2	641.883136	1281.75172	-1.1528	-0.00073997	0.04656	2.9886E-05	-1.1063	-0.00071008	641.8829970841505	95.709	2.5048	95.911	94.329	96.834	0.20242					216	59	5	0	0	0	0.72106	1	9875	9875		28.081	4.5588	1	1922900			52530	4393	35117	35130	59377	59377					0.12211243991418996
RVNLNVLREAV	11	Unmodified	_RVNLNVLREAV_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8821411132812	2	641.883136	1281.75172	-1.1529	-0.00074004	0.033515	2.1513E-05	-1.1194	-0.00071853	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.73893	1	10191	10191		24.519	0	1	3521600			52531	4393	35117	35130	59378	59378					0.12211243991418996
RVNLNVLREAV	11	Unmodified	_RVNLNVLREAV_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8825073242188	2	641.883136	1281.75172	1.4722	0.00094496	-2.5524	-0.0016383	-1.0802	-0.00069336	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.60058	2	11815	11622;11815		44.377	4.7516	1	4511200			52532	4393	35117	35130	59379;59380	59380					0.12211243991418996
RVNLNVLREAV	11	Unmodified	_RVNLNVLREAV_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8818359375	2	641.883136	1281.75172	2.6248	0.0016848	-3.6695	-0.0023554	-1.0447	-0.00067061	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.55601	2	11896	11691;11896		47.96	10.01	1	4455800			52533	4393	35117	35130	59381;59382	59382					0.12211243991418996
RVNMKRSHI	9	Unmodified	_RVNMKRSHI_					0	0	0			REV__chr11:47418945-47420264|15|16.67|0.25|6.07|-|1|PSMC3,PSMC3|1	REV__chr11:47418945-47420264|15|16.67|0.25|6.07|-|1|PSMC3,PSMC3|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3267822265625	2	570.824566	1139.63458	0.47648	0.00027199	-0.81044	-0.00046262	-0.33396	-0.00019063	570.824103297056	61.379	0.88304	61.486	61.341	62.225	0.10743					65	40	2	0	0	0	0.76764	1	5335	5335		34.173	3.6689	1	1285800	+		52534	15495	35118	35131	59383	59383					0.07034807570835255
RVNMKRSHI	9	Unmodified	_RVNMKRSHI_					0	0	0			REV__chr11:47418945-47420264|15|16.67|0.25|6.07|-|1|PSMC3,PSMC3|1	REV__chr11:47418945-47420264|15|16.67|0.25|6.07|-|1|PSMC3,PSMC3|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	570.8250732421875	2	570.824566	1139.63458	-0.44856	-0.00025605	0.18319	0.00010457	-0.26537	-0.00015148	570.8243844075674	61.574	0.9001	61.59	61.334	62.234	0.015724					68	38	2	0	0	0	0.74721	1	5380	5380		37.159	2.9866	1	801440	+		52535	15495	35118	35131	59384	59384					0.07034807570835255
RVNSKRPHL	9	Unmodified	_RVNSKRPHL_					0	0	0			REV__ENST00000495373.5_1_3:56787557-56789160:-|nuORF	REV__ENST00000495373.5_1_3:56787557-56789160:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8296508789062	2	553.830706	1105.64686	1.7761	0.00098364	-2.9855	-0.0016535	-1.2094	-0.00066981	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.78983	1	9170	9170		27.882	0	1	1628400	+		52536	27737	35119	35132	59385	59385					0.09826167305527633
RVNSKRPHL	9	Unmodified	_RVNSKRPHL_					0	0	0			REV__ENST00000495373.5_1_3:56787557-56789160:-|nuORF	REV__ENST00000495373.5_1_3:56787557-56789160:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.82958984375	2	553.830706	1105.64686	0.27729	0.00015357	-1.5835	-0.00087697	-1.3062	-0.0007234	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.69624	1	8809	8809		40.778	3.6191	1	1844500	+		52537	27737	35119	35132	59386	59386					0.09826167305527633
RVNSKRPHL	9	Unmodified	_RVNSKRPHL_					0	0	0			REV__ENST00000495373.5_1_3:56787557-56789160:-|nuORF	REV__ENST00000495373.5_1_3:56787557-56789160:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.82958984375	2	553.830706	1105.64686	0.28171	0.00015602	-1.2087	-0.0006694	-0.92696	-0.00051338	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.74721	2	8963	8963;9150		37.159	5.6293	1	6402500	+		52538	27737	35119	35132	59387;59388	59387					0.09826167305527633
RVPAGDVLVQ	10	Unmodified	_RVPAGDVLVQ_					0	0	0			REV__ENSG00000104140|ENST00000220507|RHOV	REV__ENSG00000104140|ENST00000220507|RHOV	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3055419921875	2	527.306198	1052.59784	-0.62415	-0.00032912	-2.1989	-0.0011595	-2.8231	-0.0014886	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.86218	1	10092	10092		32.812	2.3088	1	949980	+		52539	17439	35120	35133	59389	59389					0.07364834225904815
RVPAHRNLL	9	Unmodified	_RVPAHRNLL_					0	0	0		nc|ENSG00000135686|Q8N4N3-2|KLHL36;ENSG00000135686|ENST00000564996|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3262939453125	2	538.327799	1074.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.99	1	119.88	119.38	120.38	-0.10725								0	0	0	0.33676	1	12968	12968		18.324	0.062328	1				52540	4045	35121	35134	59390	59390					0.10671068793840277
RVPALVLWR	9	Unmodified	_RVPALVLWR_					0	0	0			REV__ENSG00000183172|ENST00000331479|SMDT1	REV__ENSG00000183172|ENST00000331479|SMDT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.3541259765625	2	555.350743	1108.68693	3.1602	0.001755	1.4262	0.00079205	4.5864	0.0025471	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.78058	1	11143	11143		30.504	3.8107	1	5616800	+		52541	22584	35122	35135	59391	59391					0.13693713976067556
RVPARVGT	8	Unmodified	_RVPARVGT_					0	0	0			REV__ENSG00000132823|ENST00000255174|OSER1	REV__ENSG00000132823|ENST00000255174|OSER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.26153564453125	2	428.261594	854.508634	-1.6655	-0.00071328	1.873	0.00080211	0.20742	8.8832E-05	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.91472	1	9246	9246		44.117	6.9577	1	44776000	+		52542	19035	35123	35136	59392	59392					0.07556044057048439
RVPAVLLVPLS	11	Unmodified	_RVPAVLLVPLS_					0	0	0		ENST00000369005.5_2_10:123970214-123970343:+|nuORF	ENST00000369005.5_2_10:123970214-123970343:+|nuORF	ENST00000369005.5_2_10:123970214-123970343:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3538208007812	2	582.379166	1162.74378	-0.28477	-0.00016584	-1.2035	-0.00070092	-1.4883	-0.00086677	582.3785758886005	103.58	0.2207	103.58	103.38	103.6	0					7	4	2	0	0	0	0.17245	1	10601	10601		30.318	0	1	168440			52543	10609	35124	35137	59393	59393					0.16891716741929486
RVPDAALRNPI	11	Unmodified	_RVPDAALRNPI_					0	0	0			REV__ENST00000547632.1_1_12:52309584-52313004:+|nuORF	REV__ENST00000547632.1_1_12:52309584-52313004:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3552856445312	2	611.356754	1220.69895	0.8676	0.00053041	-1.2868	-0.00078671	-0.41922	-0.00025629	611.3560720152175	95.924	5.0581	96.087	95.071	100.13	0.16317					363	118	6	0	0	0	0.70737	1	9752	9752		30.318	0	1	16539000	+		52544	28555	35125	35138	59394	59394					0.09743285928584555
RVPDLGGGLGL	11	Unmodified	_RVPDLGGGLGL_					0	0	0			REV__nc|ENSG00000291307|A0A3B3IS91|POLGARF	REV__nc|ENSG00000291307|A0A3B3IS91|POLGARF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.3129272460938	2	527.306198	1052.59784	-0.62415	-0.00032912	-2.1989	-0.0011595	-2.8231	-0.0014886	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.70737	1	10021	10021		30.318	6.115	1	949980	+		52545	30304	35126	35139	59395	59395					0.07364834225904815
RVPEAAPVLLL	11	Unmodified	_RVPEAAPVLLL_					0	0	0			REV__ENST00000310127.10_1_19:1806674-1809663:-|nuORF	REV__ENST00000310127.10_1_19:1806674-1809663:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3428955078125	2	589.368798	1176.72304	-0.67867	-0.00039999	-1.5653	-0.00092253	-2.244	-0.0013225	589.3676281923055	93.891	0.59953	93.961	93.708	94.308	0.069603					16	13	2	0	0	0	0.17245	1	9759	9759		30.318	11.214	1	101050	+		52546	24883	35127	35140	59396	59396					0.14175126362283663
RVPFLKPS	8	Unmodified	_RVPFLKPS_					0	0	0			REV__ENSG00000176896|ENST00000696128|TCEANC	REV__ENSG00000176896|ENST00000696128|TCEANC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2876281738281	2	472.28982	942.565087	-0.97075	-0.00045848	-3.4316	-0.0016207	-4.4023	-0.0020792	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.85277	2	9624	9624;9671		33.516	3.4903	1	26024000	+		52547	22153	35128	35141	59397;59398	59397					0.0915067189371257
RVPFLKPS	8	Unmodified	_RVPFLKPS_					0	0	0			REV__ENSG00000176896|ENST00000696128|TCEANC	REV__ENSG00000176896|ENST00000696128|TCEANC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2875061035156	2	472.28982	942.565087	-0.91361	-0.00043149	-2.9295	-0.0013836	-3.8431	-0.0018151	472.2883987984471	99.414	1.6316	99.414	99.097	100.73	0					84	38	3	0	0	0	0.87064	1	10037	10037		29.15	0.89528	1	360760	+		52548	22153	35128	35141	59399	59399					0.0915067189371257
RVPGAQGEPL	10	Unmodified	_RVPGAQGEPL_					0	0	0		ENSG00000198483|ENST00000355594|ANKRD35	ENSG00000198483|ENST00000355594|ANKRD35	ENSG00000198483|ENST00000355594|ANKRD35	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2838745117188	2	512.282723	1022.55089	-0.3427	-0.00017556	-2.3981	-0.0012285	-2.7408	-0.0014041	512.2814243636773	86.125	3.8841	86.31	84.842	88.726	0.18523					170	91	2	0	0	0	0.82886	1	8426	8426		37.812	3.639	1	381930			52549	8277	35129	35142	59400	59400					0.0405197467475773
RVPGARVWPL	10	Unmodified	_RVPGARVWPL_					0	0	0			REV__ENST00000360642.7_1_4:170541712-170541889:+|nuORF	REV__ENST00000360642.7_1_4:170541712-170541889:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8430786132812	2	575.845825	1149.6771	-0.46596	-0.00026832	-4.3031	-0.0024779	-4.7691	-0.0027463	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.67608	3	9242	9015;9205;9242		45.952	5.3793	1	3411000	+		52550	25483	35130	35143	59401;59402;59403	59403					0.1082452597070187
RVPGARVWPL	10	Unmodified	_RVPGARVWPL_					0	0	0			REV__ENST00000360642.7_1_4:170541712-170541889:+|nuORF	REV__ENST00000360642.7_1_4:170541712-170541889:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.842529296875	2	575.845825	1149.6771	-1.368	-0.00078773	-3.7183	-0.0021412	-5.0862	-0.0029289	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.81018	1	9347	9347		38.806	0.99462	1	6121300	+		52551	25483	35130	35143	59404	59404					0.1082452597070187
RVPGHPGLR	9	Unmodified	_RVPGHPGLR_					0	0	0		ENST00000588460.5_1_17:74733495-74734059:+|nuORF	ENST00000588460.5_1_17:74733495-74734059:+|nuORF	ENST00000588460.5_1_17:74733495-74734059:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.792724609375	2	494.793592	987.572632	-1.0341	-0.00051168	-0.3091	-0.00015294	-1.3432	-0.00066463	494.7933146843752	26.709	0.78882	26.681	26.36	27.149	-0.027704					34	18	3	0	0	0	0.78536	1	1181	1181		29.15	2.4566	1	107090			52552	14212	35131	35144	59405	59405					0.07834824213989577
RVPGLRTG	8	Unmodified	_RVPGLRTG_					0	0	0		ENST00000423007.5_1_9:134378295-134378664:+|nuORF	ENST00000423007.5_1_9:134378295-134378664:+|nuORF	ENST00000423007.5_1_9:134378295-134378664:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2615051269531	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.89043	1	9448	9448		35.618	5.1146	1	52688000			52553	11492	35132	35145	59406	59406					0.0755604405703707
RVPGLRTG	8	Unmodified	_RVPGLRTG_					0	0	0		ENST00000423007.5_1_9:134378295-134378664:+|nuORF	ENST00000423007.5_1_9:134378295-134378664:+|nuORF	ENST00000423007.5_1_9:134378295-134378664:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.261474609375	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.82658	2	9582	9521;9582		23.042	3.6355	1	55300000			52554	11492	35132	35145	59407;59408	59408					0.0755604405703707
RVPGRDVKV	9	Unmodified	_RVPGRDVKV_					0	0	0			REV__ENSG00000041880|ENST00000398755|PARP3	REV__ENSG00000041880|ENST00000398755|PARP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.31787109375	2	513.314358	1024.61416	0.40552	0.00020816	4.0183	0.0020626	4.4238	0.0022708	513.3165443291848	55.171	1.2841	55.262	54.835	56.119	0.091164					59	39	2	0	0	0	0.7932	1	4635	4635		23.042	1.0826	1	269410	+		52555	16323	35133	35146	59409	59409					0.10283960182641749
RVPHVAIFL	9	Unmodified	_RVPHVAIFL_					0	0	0		ENST00000570036.5_1_16:84513521-84531159:-|nuORF;ENSG00000140950|ENST00000343629|MEAK7	ENST00000570036.5_1_16:84513521-84531159:-|nuORF	ENST00000570036.5_1_16:84513521-84531159:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.745361328125	2	526.324194	1050.63383	-0.039652	-2.087E-05	0.86433	0.00045492	0.82468	0.00043405	526.3245870501852	71.478	0.75277	71.512	71.148	71.9	0.034004					44	32	2	0	0	0	0.7932	1	6759	6759		19.36	4.6959	1	53309			52556	4468	35134	35147	59410	59410					0.11054336193410563
RVPHVAIFL	9	Unmodified	_RVPHVAIFL_					0	0	0		ENST00000570036.5_1_16:84513521-84531159:-|nuORF;ENSG00000140950|ENST00000343629|MEAK7	ENST00000570036.5_1_16:84513521-84531159:-|nuORF	ENST00000570036.5_1_16:84513521-84531159:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3262329101562	2	526.324194	1050.63383	0.4429	0.00023311	0.69495	0.00036577	1.1378	0.00059888	526.3244429703017	58.009	1.7686	58.119	57.259	59.028	0.11027					159	84	2	0	0	0	0.76996	1	4891	4891		33.516	6.7195	1	230600			52557	4468	35134	35147	59411	59411					0.11054336193410563
RVPHVAIFL	9	Unmodified	_RVPHVAIFL_					0	0	0		ENST00000570036.5_1_16:84513521-84531159:-|nuORF;ENSG00000140950|ENST00000343629|MEAK7	ENST00000570036.5_1_16:84513521-84531159:-|nuORF	ENST00000570036.5_1_16:84513521-84531159:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3267822265625	2	526.324194	1050.63383	-0.53497	-0.00028157	1.5071	0.00079323	0.97214	0.00051166	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.7932	1	5303	5303		25.45	3.7478	1	220370			52558	4468	35134	35147	59412	59412					0.11054336193410563
RVPHVAIFL	9	Unmodified	_RVPHVAIFL_					0	0	0		ENST00000570036.5_1_16:84513521-84531159:-|nuORF;ENSG00000140950|ENST00000343629|MEAK7	ENST00000570036.5_1_16:84513521-84531159:-|nuORF	ENST00000570036.5_1_16:84513521-84531159:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	526.324194	1050.63383	-0.18701	-9.8426E-05	1.2418	0.00065356	1.0547	0.00055514	526.324693689559	57.891	1.417	57.971	57.398	58.815	0.079643	-0.048427	2.0048E-05	NaN	33.516	95	66	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172470			52559	4468	35134	35147							0.11054336193410563
RVPHVAIFL	9	Unmodified	_RVPHVAIFL_					0	0	0		ENST00000570036.5_1_16:84513521-84531159:-|nuORF;ENSG00000140950|ENST00000343629|MEAK7	ENST00000570036.5_1_16:84513521-84531159:-|nuORF	ENST00000570036.5_1_16:84513521-84531159:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	526.324194	1050.63383	0.64158	0.00033768	0.038794	2.0418E-05	0.68038	0.0003581	526.3241638196221	57.279	1.738	57.834	57.27	59.008	0.55513	-0.18511	-0.0012462	NaN	33.516	61	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	305580			52560	4468	35134	35147							0.11054336193410563
RVPIGIRRPG	10	Unmodified	_RVPIGIRRPG_					0	0	0			REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8558959960938	2	560.856724	1119.69889	1.3943	0.00078201	-3.4352	-0.0019266	-2.0409	-0.0011446	560.8547076489161	100.84	0.99243	100.89	100.52	101.51	0.046356					51	23	3	0	0	0	0.86718	1	10850	10850		27.882	2.3082	1	359120	+		52561	29996	35135	35148	59413	59413					0.14383330719260812
RVPIGIRRPG	10	Unmodified	_RVPIGIRRPG_					0	0	0			REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	560.856724	1119.69889	-1.1524	-0.00064633	-0.47657	-0.00026729	-1.629	-0.00091362	560.8563104422637	101.14	0.7385	101.17	100.84	101.57	0.031029	0.1824	0.0031647	NaN	27.882	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	182030	+		52562	29996	35135	35148							0.14383330719260812
RVPIKGGL	8	Unmodified	_RVPIKGGL_					0	0	0			REV__ENSG00000154928|ENST00000398015|EPHB1	REV__ENSG00000154928|ENST00000398015|EPHB1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.27703857421875	2	420.276712	838.538872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.399	1	46.37	45.87	46.87	-0.028782								0	0	0	0.30125	1	3811	3811		20.482	2.1574	1		+		52563	20409	35136	35149	59414	59414					0.11314402722223349
RVPKAKKKA	9	Unmodified	_RVPKAKKKA_					0	0	0		ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3502807617188	2	513.350743	1024.68693	-1.337	-0.00068635	1.1878	0.00060975	-0.14921	-7.6599E-05	513.3512264128548	56.165	1.186	56.165	55.11	56.296	0					52	34	2	0	0	0	0.7932	1	4799	4799		23.042	0	1	61084			52564	3403	35137	35150	59415	59415					0.17557713976088962
RVPKSASVSA	10	Unmodified	_RVPKSASVSA_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.29046630859375	2	501.290548	1000.56654	-0.9424	-0.00047241	0.84818	0.00042518	-0.094216	-4.7229E-05	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.6116	3	8197	8197;8209;8400		49.442	13.823	1	6939200			52565	1754	35138	35151	59416;59417;59418	59416					0.06628261191804086
RVPKSASVSA	10	Unmodified	_RVPKSASVSA_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904357910156	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.8608	5	8969	8643;8739;8871;8907;8969		34.173	6.0163	1	9565500			52566	1754	35138	35151	59419;59420;59421;59422;59423	59423					0.06628261191804086
RVPKSASVSA	10	Unmodified	_RVPKSASVSA_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.290283203125	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.86471	1	8574	8574		30.318	2.2362	1	2850500			52567	1754	35138	35151	59424	59424					0.06628261191804086
RVPKSASVSA	10	Unmodified	_RVPKSASVSA_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29034423828125	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.86218	3	8896	8896;9004;9064		32.812	6.1195	1	9883700			52568	1754	35138	35151	59425;59426;59427	59425					0.06628261191804086
RVPKSASVSA	10	Unmodified	_RVPKSASVSA_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.29022216796875	2	501.290548	1000.56654	-0.52378	-0.00026256	0.16738	8.3908E-05	-0.35639	-0.00017866	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.86218	1	8585	8585		32.812	2.9709	1	2929300			52569	1754	35138	35151	59428	59428					0.06628261191804086
RVPKSASVSA	10	Unmodified	_RVPKSASVSA_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2899475097656	2	501.290548	1000.56654	-0.36653	-0.00018374	0.15869	7.9552E-05	-0.20784	-0.00010419	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.86218	1	9104	9104		32.812	2.3088	1	9903700			52570	1754	35138	35151	59429	59429					0.06628261191804086
RVPKSASVSA	10	Unmodified	_RVPKSASVSA_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.289794921875	2	501.290548	1000.56654	-0.50774	-0.00025453	0.15503	7.7713E-05	-0.35272	-0.00017681	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.77314	1	8119	8119		40.778	3.6191	1	3014100			52571	1754	35138	35151	59430	59430					0.06628261191804086
RVPKSASVSA	10	Unmodified	_RVPKSASVSA_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29010009765625	2	501.290548	1000.56654	0.65622	0.00032896	-1.0593	-0.000531	-0.40304	-0.00020204	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.82886	1	8223	8223		37.812	6.2817	1	2931000			52572	1754	35138	35151	59431	59431					0.06628261191804086
RVPKSASVSA	10	Unmodified	_RVPKSASVSA_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904357910156	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.77314	1	8557	8557		40.778	10.275	1	9566900			52573	1754	35138	35151	59432	59432					0.06628261191804086
RVPKSASVSA	10	Unmodified	_RVPKSASVSA_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.29046630859375	2	501.290548	1000.56654	-1.5697	-0.00078686	1.3648	0.00068414	-0.20492	-0.00010273	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.86718	1	8433	8433		27.882	0	1	9242300			52574	1754	35138	35151	59433	59433					0.06628261191804086
RVPKSASVSA	10	Unmodified	_RVPKSASVSA_					0	0	0		nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	nc|ENSG00000099308|O60307|MAST3	nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2904968261719	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.86218	2	10159	10003;10159		32.812	4.8369	1	9038000			52575	1754	35138	35151	59434;59435	59435					0.06628261191804086
RVPKSKLEVGR	11	Unmodified	_RVPKSKLEVGR_					0	0	0		ENSG00000106245|ENST00000222969|BUD31	ENSG00000106245|ENST00000222969|BUD31	ENSG00000106245|ENST00000222969|BUD31	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	423.59759521484375	3	423.598094	1267.77245	2.7179	0.0011513	-3.8029	-0.0016109	-1.0849	-0.00045958	423.5963997730453	105.86	2.6165	105.82	105.15	107.76	-0.037148					224	61	5	0	0	0	0.72106	5	11656	11621;11632;11656;11667;11679		25.068	8.3826	1	6994400			52576	2285	35139	35152	59436;59437;59438;59439;59440	59438					0.1492783437106482
RVPKSKLEVGR	11	Unmodified	_RVPKSKLEVGR_					0	0	0		ENSG00000106245|ENST00000222969|BUD31	ENSG00000106245|ENST00000222969|BUD31	ENSG00000106245|ENST00000222969|BUD31	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5976257324219	3	423.598094	1267.77245	2.8995	0.0012282	-3.9608	-0.0016778	-1.0614	-0.0004496	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.75164	1	11575	11575		19.627	0	1	6928400			52577	2285	35139	35152	59441	59441					0.1492783437106482
RVPKSKLEVGR	11	Unmodified	_RVPKSKLEVGR_					0	0	0		ENSG00000106245|ENST00000222969|BUD31	ENSG00000106245|ENST00000222969|BUD31	ENSG00000106245|ENST00000222969|BUD31	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	423.5975341796875	3	423.598094	1267.77245	-1.7147	-0.00072636	0.62535	0.0002649	-1.0894	-0.00046147	423.5982725309242	105.5	3.0222	105.66	104.96	107.98	0.15925					250	75	5	0	0	0	0.74763	4	11218	11206;11218;11253;11301		25.892	6.629	1	8925200			52578	2285	35139	35152	59442;59443;59444;59445	59443					0.1492783437106482
RVPKSKLEVGR	11	Unmodified	_RVPKSKLEVGR_					0	0	0		ENSG00000106245|ENST00000222969|BUD31	ENSG00000106245|ENST00000222969|BUD31	ENSG00000106245|ENST00000222969|BUD31	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.59765625	3	423.598094	1267.77245	0.73411	0.00031097	-1.8552	-0.00078587	-1.1211	-0.00047491	423.59723125055814	105.63	2.8345	105.73	105.02	107.86	0.10765					213	69	5	0	0	0	0.69248	2	11208	11208;11220		29.245	1.784	1	8035700			52579	2285	35139	35152	59446;59447	59446					0.1492783437106482
RVPLAPTRAR	10	Unmodified	_RVPLAPTRAR_					0	0	0			REV__ENST00000510058.1_1_6:41904922-41909441:-|nuORF	REV__ENST00000510058.1_1_6:41904922-41909441:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8543090820312	2	568.854181	1135.69381	0.52259	0.00029728	-2.4856	-0.0014139	-1.963	-0.0011166	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.86763	1	10899	10899		26.693	4.733	1	84800000	+		52580	27944	35140	35153	59448	59448					0.13139026856629243
RVPLEQLCLR	10	Carbamidomethyl (C)	_RVPLEQLC(Carbamidomethyl (C))LR_	RVPLEQLC(1)LR		RVPLEQLC(42)LR		0	1	0		ENSG00000163214|ENST00000457308|DHX57	ENSG00000163214|ENST00000457308|DHX57	ENSG00000163214|ENST00000457308|DHX57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.363037109375	2	642.366264	1282.71798	-1.1506	-0.00073908	-4.392	-0.0028213	-5.5426	-0.0035604	642.3639567174044	110.02	1.5274	110.03	109.72	111.24	0.0060425					172	55	4	0	0	0	0.74274	1	11813	11813		42.396	8.2236	1	1394500			52581	5775	35141	35154	59449	59449	72				0.0879249922800227
RVPLFQVRPL	10	Unmodified	_RVPLFQVRPL_					0	0	0		ENST00000440072.5_1_X:54948679-54948769:+|nuORF	ENST00000440072.5_1_X:54948679-54948769:+|nuORF	ENST00000440072.5_1_X:54948679-54948769:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.9219970703125	3	408.92403	1223.75026	-1.7912	-0.00073246	-2.4534	-0.0010033	-4.2446	-0.0017357	408.92296036119325	104.35	2.8249	104.52	103.85	106.67	0.17096					215	70	5	0	0	0	0.86589	2	11037	11037;11095		32.751	9.3726	1	5290200			52582	11769	35142	35155	59450;59451	59450					0.14733654693304743
RVPLGRSA	8	Unmodified	_RVPLGRSA_					0	0	0		ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2615966796875	2	428.261594	854.508634	1.4286	0.0006118	-1.267	-0.00054261	0.16155	6.9187E-05	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.82658	3	9676	9676;9701;9740		37.159	0	1	57042000			52583	14183	35143	35156	59452;59453;59454	59452					0.0755604405703707
RVPLGRSA	8	Unmodified	_RVPLGRSA_					0	0	0		ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2615966796875	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.86677	2	9594	9545;9594		37.159	0	1	55300000			52584	14183	35143	35156	59455;59456	59456					0.0755604405703707
RVPLGRSA	8	Unmodified	_RVPLGRSA_					0	0	0		ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.261474609375	2	428.261594	854.508634	-1.6655	-0.00071328	1.873	0.00080211	0.20742	8.8832E-05	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.89043	1	9284	9284		35.618	6.4687	1	44776000			52585	14183	35143	35156	59457	59457					0.0755604405703707
RVPLGRSA	8	Unmodified	_RVPLGRSA_					0	0	0		ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.26141357421875	2	428.261594	854.508634	0.64465	0.00027608	-0.51085	-0.00021878	0.1338	5.7301E-05	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.8347	2	9175	9175;9248		30.504	0	1	40631000			52586	14183	35143	35156	59458;59459	59458					0.0755604405703707
RVPLGRSA	8	Unmodified	_RVPLGRSA_					0	0	0		ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2615966796875	2	428.261594	854.508634	-1.8497	-0.00079216	1.9562	0.00083775	0.10645	4.5588E-05	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.87064	1	9154	9154		29.15	1.2673	1	31323000			52587	14183	35143	35156	59460	59460					0.0755604405703707
RVPLPGPLF	9	Unmodified	_RVPLPGPLF_					0	0	0		ENST00000467042.1_1_2:99182504-99185377:+|nuORF;nc|ENSG00000040933|Q96PE3-2|INPP4A;nc|ENSG00000040933|Q96PE3-4|INPP4A;ENSG00000040933|ENST00000409851|INPP4A;nc|ENSG00000040933|Q96PE3|INPP4A	ENST00000467042.1_1_2:99182504-99185377:+|nuORF	ENST00000467042.1_1_2:99182504-99185377:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.3073425292969	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.134	1	53.131	52.631	53.631	-0.0033035								0	0	0	0.31472	1	4630	4630		25.45	0	1				52588	930	35144	35157	59461	59461					0.09887244927790562
RVPLPRVRDS	10	Unmodified	_RVPLPRVRDS_					0	0	0		ENST00000564674.5_1_15:66053761-66084536:-|nuORF	ENST00000564674.5_1_15:66053761-66084536:-|nuORF	ENST00000564674.5_1_15:66053761-66084536:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8563232421875	2	597.856921	1193.69929	-0.56163	-0.00033577	-0.46706	-0.00027924	-1.0287	-0.00061501	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.73395	1	9916	9916		42.864	4.1107	1	6282800			52589	13891	35145	35158	59462	59462					0.11018705648461946
RVPLPRVRDS	10	Unmodified	_RVPLPRVRDS_					0	0	0		ENST00000564674.5_1_15:66053761-66084536:-|nuORF	ENST00000564674.5_1_15:66053761-66084536:-|nuORF	ENST00000564674.5_1_15:66053761-66084536:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8561401367188	2	597.856921	1193.69929	2.1625	0.0012929	-3.3793	-0.0020203	-1.2168	-0.00072745	597.8546696490685	92.423	2.9286	92.359	90.439	93.367	-0.06414					206	70	4	0	0	0	0.82886	1	9852	9852		37.812	11.119	1	2186000			52590	13891	35145	35158	59463	59463					0.11018705648461946
RVPLPRVRDS	10	Unmodified	_RVPLPRVRDS_					0	0	0		ENST00000564674.5_1_15:66053761-66084536:-|nuORF	ENST00000564674.5_1_15:66053761-66084536:-|nuORF	ENST00000564674.5_1_15:66053761-66084536:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8562622070312	2	597.856921	1193.69929	-1.2963	-0.00077498	0.15024	8.982E-05	-1.146	-0.00068516	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.85981	1	9391	9391		35.152	0	1	2401200			52591	13891	35145	35158	59464	59464					0.11018705648461946
RVPLRLRLL	9	Unmodified	_RVPLRLRLL_					0	0	0			REV__ENSG00000186474|ENST00000684732|KLK12	REV__ENSG00000186474|ENST00000684732|KLK12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8953857421875	2	568.392942	1134.77133	0.68525	0.00038949	0.18122	0.00010301	0.86647	0.00049249	568.8948492928635	29.651	0.37653	29.662	29.446	29.822	0.01123					31	18	2	0	0	0	0.7932	1	1264	1264		8.2313	1.4958	1	85516	+		52592	22857	35146	35159	59465	59465					0.20933664792823947
RVPLRLRLL	9	Unmodified	_RVPLRLRLL_					0	0	0			REV__ENSG00000186474|ENST00000684732|KLK12	REV__ENSG00000186474|ENST00000684732|KLK12	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	568.392942	1134.77133	0.68525	0.00038949	0.18122	0.00010301	0.86647	0.00049249	568.8948492928635	29.651	0.37653	29.662	29.446	29.822	0.01123	0	0	NaN	8.2313	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85516	+		52593	22857	35146	35159							0.20933664792823947
RVPLTSLKSHQ	11	Unmodified	_RVPLTSLKSHQ_					0	0	0		nc|ENSG00000047056|Q9Y2I8-2|WDR37;ENSG00000047056|ENST00000263150|WDR37	nc|ENSG00000047056|Q9Y2I8-2|WDR37	nc|ENSG00000047056|Q9Y2I8-2|WDR37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3687744140625	2	633.369861	1264.72517	2.3091	0.0014625	-3.4627	-0.0021932	-1.1537	-0.00073069	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.61749	1	11664	11664		33.039	0	1	10333000			52594	954	35147	35160	59466	59466					0.10339555100085818
RVPNFVPVV	9	Unmodified	_RVPNFVPVV_					0	0	0			REV__ENSG00000137338|ENST00000682144|PGBD1	REV__ENSG00000137338|ENST00000682144|PGBD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8087768554688	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.7932	1	4561	4561		18.324	0	1	771120	+		52595	19379	35148	35161	59467	59467					0.09042343439477918
RVPNFVPVV	9	Unmodified	_RVPNFVPVV_					0	0	0			REV__ENSG00000137338|ENST00000682144|PGBD1	REV__ENSG00000137338|ENST00000682144|PGBD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8084106445312	2	513.808377	1025.6022	-0.26337	-0.00013532	1.4503	0.00074519	1.187	0.00060987	513.8089696081398	52.202	2.125	52.215	51.482	53.607	0.012436					136	54	4	0	0	0	0.7932	1	4485	4485		26.796	1.3459	1	732880	+		52596	19379	35148	35161	59468	59468					0.09042343439477918
RVPNFVPVV	9	Unmodified	_RVPNFVPVV_					0	0	0			REV__ENSG00000137338|ENST00000682144|PGBD1	REV__ENSG00000137338|ENST00000682144|PGBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8107299804688	2	513.808377	1025.6022	-0.38169	-0.00019611	1.5765	0.00081004	1.1949	0.00061393	513.8090625447543	52.238	1.9223	52.279	51.517	53.439	0.040596					143	64	3	0	0	0	0.7932	1	4131	4131		19.36	0.25645	1	926440	+		52597	19379	35148	35161	59469	59469					0.09042343439477918
RVPNFVPVV	9	Unmodified	_RVPNFVPVV_					0	0	0			REV__ENSG00000137338|ENST00000682144|PGBD1	REV__ENSG00000137338|ENST00000682144|PGBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8086547851562	2	513.808377	1025.6022	0.37872	0.00019459	0.75131	0.00038603	1.13	0.00058062	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.7932	1	4193	4193		18.324	0	1	971720	+		52598	19379	35148	35161	59470	59470					0.09042343439477918
RVPNKLSVSA	10	Unmodified	_RVPNKLSVSA_					0	0	0			REV__ENST00000484427.5_1_20:47835892-47850293:+|nuORF	REV__ENST00000484427.5_1_20:47835892-47850293:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.8141479492188	2	535.819473	1069.62439	-0.091924	-4.9255E-05	-3.7331	-0.0020002	-3.825	-0.0020495	535.8178493049433	99.302	1.7934	99.351	99.017	100.81	0.049828					71	41	3	0	0	0	0.8651	1	10525	10525		25.574	1.3713	1	385560	+		52599	18574	35149	35162	59471	59471					0.09236523117237994
RVPNRLIHE	9	Unmodified	_RVPNRLIHE_					0	0	0		ENST00000512416.5_1_17:48625445-48625815:+|nuORF;ENST00000505336.1_1_17:48625445-48626125:+|nuORF;nc|ENSG00000006282|Q8TB22-4|SPATA20;ENST00000503063.5_1_17:48625445-48628667:+|nuORF;nc|ENSG00000006282|Q8TB22-3|SPATA20;nc|ENSG00000006282|Q8TB22|SPATA20;ENSG00000006282|ENST00000006658|SPATA20	ENST00000512416.5_1_17:48625445-48625815:+|nuORF	ENST00000512416.5_1_17:48625445-48625815:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3296508789062	2	567.330539	1132.64652	1.5887	0.00090129	-2.6625	-0.0015105	-1.0739	-0.00060923	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.7932	1	9496	9496		24.203	0	1	5459400			52600	696	35150	35163	59472	59472					0.0855074758567298
RVPNRLIHE	9	Unmodified	_RVPNRLIHE_					0	0	0		ENST00000512416.5_1_17:48625445-48625815:+|nuORF;ENST00000505336.1_1_17:48625445-48626125:+|nuORF;nc|ENSG00000006282|Q8TB22-4|SPATA20;ENST00000503063.5_1_17:48625445-48628667:+|nuORF;nc|ENSG00000006282|Q8TB22-3|SPATA20;nc|ENSG00000006282|Q8TB22|SPATA20;ENSG00000006282|ENST00000006658|SPATA20	ENST00000512416.5_1_17:48625445-48625815:+|nuORF	ENST00000512416.5_1_17:48625445-48625815:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3302001953125	2	567.330539	1132.64652	0.4851	0.00027521	-1.8618	-0.0010563	-1.3767	-0.00078107	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.77546	1	9221	9221		31.955	6.3808	1	18558000			52601	696	35150	35163	59473	59473					0.0855074758567298
RVPNRLIHE	9	Unmodified	_RVPNRLIHE_					0	0	0		ENST00000512416.5_1_17:48625445-48625815:+|nuORF;ENST00000505336.1_1_17:48625445-48626125:+|nuORF;nc|ENSG00000006282|Q8TB22-4|SPATA20;ENST00000503063.5_1_17:48625445-48628667:+|nuORF;nc|ENSG00000006282|Q8TB22-3|SPATA20;nc|ENSG00000006282|Q8TB22|SPATA20;ENSG00000006282|ENST00000006658|SPATA20	ENST00000512416.5_1_17:48625445-48625815:+|nuORF	ENST00000512416.5_1_17:48625445-48625815:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3299560546875	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.72402	1	10813	10813		38.806	10.924	1	6182600			52602	696	35150	35163	59474	59474					0.0855074758567298
RVPPLHLRQAK	11	Unmodified	_RVPPLHLRQAK_					0	0	0			REV__ENSG00000163956|ENST00000650182|LRPAP1	REV__ENSG00000163956|ENST00000650182|LRPAP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.6125793457031	3	438.942084	1313.80442	-1.2587	-0.00055251	-0.60709	-0.00026648	-1.8658	-0.00081899	439.27595143511803	58.972	1.1589	59.364	58.609	59.768	0.39209					36	27	2	0	0	0	0.18034	1	6107	6107		4.8861	0	1	140150	+		52603	21003	35151	35164	59475	59475					0.16007246844878864
RVPPPGFKRL	10	Unmodified	_RVPPPGFKRL_					0	0	0		chr7:56034154-56039018|13|16.77|0.08|7.73|-|1|TE_info:AluSp,AluSp_dup19464,Alu,SINE,donor,+,56039018,56039168|PSPH,None|2	chr7:56034154-56039018|13|16.77|0.08|7.73|-|1|TE_info:AluSp,AluSp_dup19464,Alu,SINE,donor,+,56039018,56039168|PSPH,None|2	chr7:56034154-56039018|13|16.77|0.08|7.73|-|1|TE_info:AluSp,AluSp_dup19464,Alu,SINE,donor,+,56039018,56039168|PSPH,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	583.8584594726562	2	583.861475	1165.7084	-1.3418	-0.00078345	-2.9975	-0.0017501	-4.3394	-0.0025336	583.8594781261362	98.555	2.0612	98.751	98.2	100.26	0.19585					97	47	4	0	0	0	0.86763	1	10198	10198		26.693	0.62953	1	828850			52604	501	35152	35165	59476	59476					0.1321709900478254
RVPPPPPIA	9	Unmodified	_RVPPPPPIA_					0	0	0		ENSG00000277058|ENST00000617807|HNRNPCL3;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000179172|ENST00000317869|HNRNPCL1;ENST00000571636.1_1_16:11336795-11337332:+|nuORF;ENST00000457130.2_1_X:143922603-143922738:+|nuORF;ENST00000560385.2_1_15:79528799-79529129:+|nuORF;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC	ENSG00000277058|ENST00000617807|HNRNPCL3;nc|ENSG00000092199|P07910-3|HNRNPC	ENSG00000277058|ENST00000617807|HNRNPCL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2876281738281	2	472.28982	942.565087	-0.108	-5.1006E-05	-4.4569	-0.0021049	-4.5649	-0.0021559	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.76996	1	10071	10071		33.516	1.5607	1	46909000			52605	7253;1694	35153	35166	59477	59477					0.09150671893689832
RVPPPPRRG	9	Unmodified	_RVPPPPRRG_					0	0	0		ENST00000492189.5_1_14:104029639-104053625:+|nuORF	ENST00000492189.5_1_14:104029639-104053625:+|nuORF	ENST00000492189.5_1_14:104029639-104053625:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3143310546875	2	516.314692	1030.61483	0.87081	0.00044961	-2.0399	-0.0010532	-1.1691	-0.00060363	516.313628553853	118.82	0.58643	118.84	118.61	119.19	0.026466					32	24	2	0	0	0	0.7932	1	13080	13080		18.324	0.062328	1	55044			52606	12699	35154	35167	59478	59478					0.10074799622361752
RVPPRSTG	8	Unmodified	_RVPPRSTG_					0	0	0			REV__ENST00000296657.6_1_5:10653441-10653774:+|nuORF	REV__ENST00000296657.6_1_5:10653441-10653774:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2515563964844	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87922	2	7694	7694;7758		31.955	2.8053	1	2823900	+		52607	24720	35155	35168	59479;59480	59479					0.04839453677379879
RVPPRSTG	8	Unmodified	_RVPPRSTG_					0	0	0			REV__ENST00000296657.6_1_5:10653441-10653774:+|nuORF	REV__ENST00000296657.6_1_5:10653441-10653774:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2515869140625	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.87479	3	7470	7470;7518;7756		31.955	6.5047	1	2743300	+		52608	24720	35155	35168	59481;59482;59483	59481					0.04839453677379879
RVPPTKAPEV	10	Unmodified	_RVPPTKAPEV_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.840087890625	2	547.321848	1092.62914	-0.43128	-0.00023605	1.6992	0.00092999	1.2679	0.00069394	547.3224130952078	101.23	0.56872	101.26	100.92	101.49	0.031036					19	13	2	0	0	0	0.37624	1	10779	10779		30.318	0	1	113130			52609	5333	35156	35169	59484	59484					0.08653407259998858
RVPQAPYTSRL	11	Unmodified	_RVPQAPYTSRL_					0	0	0			REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	644.3592529296875	2	644.362036	1286.70952	-0.014572	-9.3895E-06	-3.7181	-0.0023958	-3.7327	-0.0024052	644.3592647744789	97.875	2.3785	97.932	96.646	99.024	0.056831					106	54	3	0	0	0	0.7144	1	10386	10386		29.17	0	1	163910	+		52610	28061	35157	35170	59485	59485					0.07763268583039462
RVPQAPYTSRL	11	Unmodified	_RVPQAPYTSRL_					0	0	0			REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	644.362036	1286.70952	-0.048792	-3.144E-05	-4.1499	-0.0026741	-4.1987	-0.0027055	644.3582615314048	97.941	1.8112	97.941	97.249	99.06	0	0.10175	-9.4762E-05	NaN	29.17	74	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118960	+		52611	28061	35157	35170							0.07763268583039462
RVPQAPYTSRL	11	Unmodified	_RVPQAPYTSRL_					0	0	0			REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	644.362036	1286.70952	-0.014572	-9.3895E-06	-3.7181	-0.0023958	-3.7327	-0.0024052	644.3592647744789	97.875	2.3785	97.932	96.646	99.024	0.056831	0.093207	0.00046172	NaN	29.17	106	54	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	163910	+		52612	28061	35157	35170							0.07763268583039462
RVPQAPYTSRL	11	Unmodified	_RVPQAPYTSRL_					0	0	0			REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	644.362036	1286.70952	-1.1431	-0.00073655	-2.7432	-0.0017676	-3.8863	-0.0025042	644.3600153739095	97.562	2.1239	97.764	96.791	98.914	0.20207	-0.0747	0.0017181	NaN	29.17	107	48	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217280	+		52613	28061	35157	35170							0.07763268583039462
RVPRAHSPGI	10	Unmodified	_RVPRAHSPGI_					0	0	0		ENST00000265634.3_1_7:98257984-98258137:+|nuORF	ENST00000265634.3_1_7:98257984-98258137:+|nuORF	ENST00000265634.3_1_7:98257984-98258137:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.316650390625	2	545.317432	1088.62031	1.1684	0.00063715	-2.5262	-0.0013776	-1.3578	-0.00074041	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.77314	1	9174	9174		40.778	3.6191	1	4705800			52614	9509	35158	35171	59486	59486					0.07954478414194455
RVPRDIPA	8	Unmodified	_RVPRDIPA_					0	0	0		ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	462.2735595703125	2	462.274701	922.534849	-1.0687	-0.00049402	-0.75742	-0.00035014	-1.8261	-0.00084416	462.2737230577971	92.693	1.771	92.693	92.156	93.927	0					71	40	3	0	0	0	0.86288	1	9118	9118		26.796	0	1	209350			52615	4180	35159	35172	59487	59487					0.070483132285176
RVPRDIPA	8	Unmodified	_RVPRDIPA_					0	0	0		ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	462.274701	922.534849	-0.12325	-5.6975E-05	0.20003	9.2468E-05	0.076779	3.5493E-05	462.27466001007656	92.387	1.0262	92.457	92.069	93.095	0.06987	-0.011304	4.7933E-05	NaN	26.796	53	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	266970			52616	4180	35159	35172							0.070483132285176
RVPRDIPA	8	Unmodified	_RVPRDIPA_					0	0	0		ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	462.274701	922.534849	1.6573	0.00076611	-1.6942	-0.00078318	-0.036918	-1.7066E-05	462.27390105053877	92.388	1.1482	92.324	91.817	92.965	-0.064148	-0.1446	-0.0017034	NaN	26.796	61	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	280570			52617	4180	35159	35172							0.070483132285176
RVPRDIPA	8	Unmodified	_RVPRDIPA_					0	0	0		ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	462.274701	922.534849	0.59155	0.00027346	-0.50424	-0.0002331	0.087313	4.0363E-05	462.2743307977925	92.253	1.0267	92.299	91.81	92.837	0.045448	-0.16941	-0.0006032	NaN	26.796	60	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	311000			52618	4180	35159	35172							0.070483132285176
RVPRDIPA	8	Unmodified	_RVPRDIPA_					0	0	0		ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	462.274701	922.534849	-1.0713	-0.00049521	1.2353	0.00057106	0.16407	7.5847E-05	462.2751954406368	92.23	1.0619	92.451	91.85	92.911	0.22157	-0.016694	0.0010051	NaN	26.796	59	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	297840			52619	4180	35159	35172							0.070483132285176
RVPRDIPA	8	Unmodified	_RVPRDIPA_					0	0	0		ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	462.274701	922.534849	0.68951	0.00031874	-0.62363	-0.00028829	0.065878	3.0454E-05	462.2742686785516	92.256	1.0197	92.415	91.899	92.919	0.15874	-0.053046	-0.00071358	NaN	26.796	57	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299990			52620	4180	35159	35172							0.070483132285176
RVPRDIPA	8	Unmodified	_RVPRDIPA_					0	0	0		ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	462.274701	922.534849	-1.7378	-0.00080335	1.7046	0.00078798	-0.033235	-1.5364E-05	462.27544277547355	92.304	1.0219	92.489	91.916	92.938	0.18582	0.021333	0.001439	NaN	26.796	52	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	279720			52621	4180	35159	35172							0.070483132285176
RVPRDIPA	8	Unmodified	_RVPRDIPA_					0	0	0		ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	462.274701	922.534849	0.74064	0.00034238	-0.57569	-0.00026613	0.16495	7.6252E-05	462.27437511273257	92.156	1.0246	92.602	91.922	92.947	0.44662	0.13426	-0.00066925	NaN	26.796	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102470			52622	4180	35159	35172							0.070483132285176
RVPRDIPA	8	Unmodified	_RVPRDIPA_					0	0	0		ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	ENSG00000137207|ENST00000372422|YIPF3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	462.274701	922.534849	-0.91618	-0.00042353	1.0411	0.00048126	0.12489	5.7731E-05	462.2749652587279	92.02	0.89684	92.482	92.149	93.046	0.46249	0.014298	0.00082551	NaN	26.796	35	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110830			52623	4180	35159	35172							0.070483132285176
RVPRENMLSRF	11	Unmodified	_RVPRENMLSRF_					0	0	0		ENSG00000168306|ENST00000302819|ACOX2	ENSG00000168306|ENST00000302819|ACOX2	ENSG00000168306|ENST00000302819|ACOX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.9216003417969	3	468.922472	1403.74559	-0.88928	-0.000417	1.2226	0.0005733	0.33331	0.0001563	468.9229036984858	54.158	0.75184	54.743	54.376	55.127	0.58474					50	17	4	0	0	0	0.6396	1	5506	5506		39.873	5.7867	1	1494500			52624	6391	35160	35173	59488	59488					0.05986402488224485
RVPRGLGT	8	Unmodified	_RVPRGLGT_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.261474609375	2	428.261594	854.508634	-1.1356	-0.00048635	1.4339	0.00061408	0.29824	0.00012772	428.2621524287907	91.088	2.5476	91.088	90.477	93.025	0					222	59	5	0	0	0	0.87064	1	8928	8928		29.15	6.1071	1	33233000			52625	13531	35161	35174	59489	59489					0.07556044057048439
RVPRGLGT	8	Unmodified	_RVPRGLGT_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2616271972656	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.8347	3	9399	9399;9484;9496		23.042	5.6775	1	52688000			52626	13531	35161	35174	59490;59491;59492	59490					0.07556044057048439
RVPRGLGT	8	Unmodified	_RVPRGLGT_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2615661621094	2	428.261594	854.508634	1.4286	0.0006118	-1.267	-0.00054261	0.16155	6.9187E-05	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.84341	1	9640	9640		24.203	1.1603	1	57042000			52627	13531	35161	35174	59493	59493					0.07556044057048439
RVPRGLGT	8	Unmodified	_RVPRGLGT_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2613220214844	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.87064	1	9356	9356		29.15	6.1071	1	55300000			52628	13531	35161	35174	59494	59494					0.07556044057048439
RVPRGLGT	8	Unmodified	_RVPRGLGT_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.2615661621094	2	428.261594	854.508634	0.64465	0.00027608	-0.51085	-0.00021878	0.1338	5.7301E-05	428.26130103163763	90.704	2.529	90.858	90.217	92.746	0.15388					218	60	5	0	0	0	0.8347	1	9236	9236		23.042	1.3402	1	40631000			52629	13531	35161	35174	59495	59495					0.07556044057048439
RVPRGLGT	8	Unmodified	_RVPRGLGT_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2615661621094	2	428.261594	854.508634	-1.8497	-0.00079216	1.9562	0.00083775	0.10645	4.5588E-05	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.8347	4	9118	9081;9118;9130;9166		30.504	0	1	31323000			52630	13531	35161	35174	59496;59497;59498;59499	59497					0.07556044057048439
RVPRGLGT	8	Unmodified	_RVPRGLGT_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.261474609375	2	428.261594	854.508634	-1.021	-0.00043726	1.2368	0.00052966	0.21577	9.2404E-05	428.26203928148993	90.556	2.3584	91.026	90.524	92.882	0.47068					198	56	5	0	0	0	0.8347	4	10833	10821;10833;10845;10857		38.806	0	1	38446000			52631	13531	35161	35174	59500;59501;59502;59503	59501					0.07556044057048439
RVPRGPRLSV	10	Unmodified	_RVPRGPRLSV_					0	0	0		nc|ENSG00000028310|Q9H8M2-4|BRD9;ENST00000495794.5_1_5:883971-889814:-|nuORF	nc|ENSG00000028310|Q9H8M2-4|BRD9	nc|ENSG00000028310|Q9H8M2-4|BRD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8543701171875	2	568.854181	1135.69381	-1.1637	-0.000662	-0.61846	-0.00035181	-1.7822	-0.0010138	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.85466	1	11141	11141		20.947	2.6225	1	50786000			52632	12774	35162	35175	59504	59504					0.1313902685665198
RVPRIKLEKL	10	Unmodified	_RVPRIKLEKL_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	ENSG00000183354|ENST00000399933|KIAA2026	ENSG00000183354|ENST00000399933|KIAA2026	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.92242431640625	3	417.946835	1250.81868	2.717	0.0011356	1.361	0.00056882	4.078	0.0017044	417.9475691084289	105.95	0.15672	105.92	105.86	106.01	-0.03714					6	3	2	0	0	0	0.37624	1	11698	11698		20.03	13.012	1	119250			52633	7527	35163	35176	59505	59505					0.20329899273178853
RVPRLTGT	8	Unmodified	_RVPRLTGT_					0	0	0		chr1:148461093-148463388|14|10.71|0.27|5.34|-|2|LINC01138,LINC01138|1	REV__ENSG00000110042|ENST00000227451|DTX4	REV__ENSG00000110042|ENST00000227451|DTX4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2745361328125	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.8347	3	9294	9270;9294;9418		31.955	0	1	26247000	+		52634	17788	35164	35177	59506;59507;59508	59507					0.08152313228526964
RVPRLTGT	8	Unmodified	_RVPRLTGT_					0	0	0		chr1:148461093-148463388|14|10.71|0.27|5.34|-|2|LINC01138,LINC01138|1	REV__ENSG00000110042|ENST00000227451|DTX4	REV__ENSG00000110042|ENST00000227451|DTX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2743835449219	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.88601	1	9809	9809		34.173	3.6689	1	51698000	+		52635	17788	35164	35177	59509	59509					0.08152313228526964
RVPRLTGT	8	Unmodified	_RVPRLTGT_					0	0	0		chr1:148461093-148463388|14|10.71|0.27|5.34|-|2|LINC01138,LINC01138|1	REV__ENSG00000110042|ENST00000227451|DTX4	REV__ENSG00000110042|ENST00000227451|DTX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.27459716796875	2	450.274701	898.534849	-1.7763	-0.00079984	1.0964	0.00049366	-0.67999	-0.00030618	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.82658	1	9502	9502		21.96	0	1	35178000	+		52636	17788	35164	35177	59510	59510					0.08152313228526964
RVPRLTGT	8	Unmodified	_RVPRLTGT_					0	0	0		chr1:148461093-148463388|14|10.71|0.27|5.34|-|2|LINC01138,LINC01138|1	REV__ENSG00000110042|ENST00000227451|DTX4	REV__ENSG00000110042|ENST00000227451|DTX4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2745361328125	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.86677	1	11073	11073		27.882	0	1	19085000	+		52637	17788	35164	35177	59511	59511					0.08152313228526964
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.316650390625	2	545.317432	1088.62031	-0.68757	-0.00037494	-0.58844	-0.00032088	-1.276	-0.00069583	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.67345	6	8617	8378;8558;8570;8617;8641;8688		42.396	8.2236	1	3608000	+		52638	25851	35165	35178	59512;59513;59514;59515;59516;59517	59515					0.07954478414194455
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.316650390625	2	545.317432	1088.62031	-0.33932	-0.00018504	-1.0312	-0.00056233	-1.3705	-0.00074737	545.3167320868513	88.688	3.0665	88.756	86.708	89.775	0.068161					243	71	4	0	0	0	0.64922	11	9016	8837;8899;8922;8968;9004;9016;9028;9040;9051;9087;9123		44.117	12.587	1	4710900	+		52639	25851	35165	35178	59518;59519;59520;59521;59522;59523;59524;59525;59526;59527;59528	59523					0.07954478414194455
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3168334960938	2	545.317432	1088.62031	1.9901	0.0010853	-3.3293	-0.0018155	-1.3392	-0.00073027	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.74721	7	9169	9084;9169;9193;9240;9336;9348;9359		37.159	9.2769	1	4704900	+		52640	25851	35165	35178	59529;59530;59531;59532;59533;59534;59535	59530					0.07954478414194455
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.316650390625	2	545.317432	1088.62031	1.1684	0.00063715	-2.5262	-0.0013776	-1.3578	-0.00074041	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.62081	10	9066	8959;9031;9042;9054;9066;9077;9089;9138;9210;9222		45.952	18.07	1	4705800	+		52641	25851	35165	35178	59536;59537;59538;59539;59540;59541;59542;59543;59544;59545	59540					0.07954478414194455
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.316650390625	2	545.317432	1088.62031	0.15103	8.2357E-05	-1.6523	-0.00090103	-1.5013	-0.00081867	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.64922	12	8795	8639;8663;8676;8723;8735;8747;8758;8770;8782;8795;8855;8903		44.117	12.587	1	5755000	+		52642	25851	35165	35178	59546;59547;59548;59549;59550;59551;59552;59553;59554;59555;59556;59557	59555					0.07954478414194455
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3170776367188	2	545.317432	1088.62031	0.15577	8.4944E-05	-1.2744	-0.00069494	-1.1186	-0.00060999	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.51307	11	9342	8950;8962;8974;9022;9034;9082;9232;9293;9342;9416;9464		51.335	14.315	1	17220000	+		52643	25851	35165	35178	59558;59559;59560;59561;59562;59563;59564;59565;59566;59567;59568	59566					0.07954478414194455
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.317626953125	2	545.317432	1088.62031	0.73643	0.00040159	-2.1406	-0.0011673	-1.4042	-0.00076572	545.316117867523	88.493	3.0395	88.643	86.614	89.654	0.15055					258	71	4	0	0	0	0.51307	17	8621	8597;8621;8632;8668;8728;8751;8787;8799;8811;8823;8835;8847;8859;8871;8906;8918;8930		51.335	17.424	1	5181100	+		52644	25851	35165	35178	59569;59570;59571;59572;59573;59574;59575;59576;59577;59578;59579;59580;59581;59582;59583;59584;59585	59570					0.07954478414194455
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3167724609375	2	545.317432	1088.62031	-1.4651	-0.00079892	0.057523	3.1368E-05	-1.4075	-0.00076755	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.51307	8	8818	8664;8700;8723;8735;8758;8771;8806;8818		51.335	15.703	1	4998200	+		52645	25851	35165	35178	59586;59587;59588;59589;59590;59591;59592;59593	59593					0.07954478414194455
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3169555664062	2	545.317432	1088.62031	-1.4674	-0.00080021	-0.051066	-2.7847E-05	-1.5185	-0.00082805	545.3172916402864	93.375	2.3581	93.567	93.147	95.505	0.19239					96	56	3	0	0	0	0.64922	1	9432	9432		44.117	8.9648	1	1075700	+		52646	25851	35165	35178	59594	59594					0.07954478414194455
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3165283203125	2	545.317432	1088.62031	-0.0069207	-3.774E-06	-1.1928	-0.00065047	-1.1997	-0.00065424	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.64922	5	10376	10376;10400;10436;10507;10544		44.117	10.195	1	4868200	+		52647	25851	35165	35178	59595;59596;59597;59598;59599	59595					0.07954478414194455
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3158569335938	2	545.317432	1088.62031	0.65018	0.00035456	-2.1499	-0.0011724	-1.4998	-0.00081784	545.316213260096	93.135	0.92345	93.576	93.271	94.194	0.44099					56	21	3	0	0	0	0.69624	1	11108	11108		40.778	11.629	1	496970	+		52648	25851	35165	35178	59600	59600					0.07954478414194455
RVPRRFTSA	9	Unmodified	_RVPRRFTSA_					0	0	0			REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	REV__ENST00000376983.7_1_X:47509324-47509894:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3168334960938	2	545.317432	1088.62031	-1.3538	-0.00073823	0.10277	5.6043E-05	-1.251	-0.00068219	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.51307	6	10415	10392;10415;10439;10451;10525;10548		51.335	10.557	1	5184000	+		52649	25851	35165	35178	59601;59602;59603;59604;59605;59606	59602					0.07954478414194455
RVPRRQRTAR	10	Unmodified	_RVPRRQRTAR_					0	0	0			REV__ENST00000468045.5_1_2:27356354-27356477:-|nuORF	REV__ENST00000468045.5_1_2:27356354-27356477:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5975646972656	3	432.600832	1294.78067	-1.8325	-0.00079275	-4.2581	-0.001842	-6.0906	-0.0026348	432.598847314963	107.12	1.3043	107.16	106.63	107.93	0.036118					117	31	6	0	0	0	0.8492	1	11361	11361		18.531	7.0764	1	10726000	+		52650	27172	35166	35179	59607	59607					0.14506826131059825
RVPRSLCGVC	10	Unmodified	_RVPRSLCGVC_					0	0	0		ENST00000556842.5_1_14:24899162-24899995:+|nuORF	ENST00000556842.5_1_14:24899162-24899995:+|nuORF	ENST00000556842.5_1_14:24899162-24899995:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3167114257812	2	545.286428	1088.5583	0.54393	0.0002966	1.1415	0.00062244	1.6854	0.00091903	545.2875842595399	91.028	0.24539	91.478	91.26	91.505	0.44958					6	5	2	0	0	0	0.37624	1	10775	10775		44.117	14.947	1	136620			52651	13756	35167	35180	59608	59608					0.017566676791830105
RVPRSPAS	8	Unmodified	_RVPRSPAS_					0	0	0		ENST00000331434.6_1_8:146277861-146278117:+|nuORF;ENST00000524395.5_1_8:146277868-146278117:+|nuORF	ENST00000331434.6_1_8:146277861-146278117:+|nuORF	ENST00000331434.6_1_8:146277861-146278117:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2515563964844	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.87479	1	7639	7639		30.504	1.3541	1	2743300			52652	10122	35168	35181	59609	59609					0.04839453677379879
RVPRVETG	8	Unmodified	_RVPRVETG_					0	0	0		ENST00000586342.1_1_19:892595-892778:-|nuORF	ENST00000586342.1_1_19:892595-892778:-|nuORF	ENST00000586342.1_1_19:892595-892778:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26385498046875	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.91977	1	8006	8006		45.952	5.3793	1	4511100			52653	14165	35169	35182	59610	59610					0.05435722848858404
RVPRVETG	8	Unmodified	_RVPRVETG_					0	0	0		ENST00000586342.1_1_19:892595-892778:-|nuORF	ENST00000586342.1_1_19:892595-892778:-|nuORF	ENST00000586342.1_1_19:892595-892778:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2640686035156	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.89962	1	8366	8366		38.806	1.647	1	4885100			52654	14165	35169	35182	59611	59611					0.05435722848858404
RVPRVETG	8	Unmodified	_RVPRVETG_					0	0	0		ENST00000586342.1_1_19:892595-892778:-|nuORF	ENST00000586342.1_1_19:892595-892778:-|nuORF	ENST00000586342.1_1_19:892595-892778:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2640075683594	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.87479	1	8136	8136		30.504	4.9296	1	4814400			52655	14165	35169	35182	59612	59612					0.05435722848858404
RVPRVETG	8	Unmodified	_RVPRVETG_					0	0	0		ENST00000586342.1_1_19:892595-892778:-|nuORF	ENST00000586342.1_1_19:892595-892778:-|nuORF	ENST00000586342.1_1_19:892595-892778:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.263916015625	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.87479	2	7780	7780;8075		31.955	4.0726	1	4732500			52656	14165	35169	35182	59613;59614	59613					0.05435722848858404
RVPRVETG	8	Unmodified	_RVPRVETG_					0	0	0		ENST00000586342.1_1_19:892595-892778:-|nuORF	ENST00000586342.1_1_19:892595-892778:-|nuORF	ENST00000586342.1_1_19:892595-892778:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.26422119140625	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.87479	1	9443	9443		30.504	4.9296	1	4402400			52657	14165	35169	35182	59615	59615					0.05435722848858404
RVPRVLRAGL	10	Unmodified	_RVPRVLRAGL_					0	0	0		ENST00000490483.5_3_19:36500194-36502343:-|nuORF;ENST00000490986.5_3_19:36500194-36502343:-|nuORF;ENSG00000239382|ENST00000378875|ALKBH6;nc|ENSG00000239382|Q3KRA9-2|ALKBH6	ENST00000490483.5_3_19:36500194-36502343:-|nuORF	ENST00000490483.5_3_19:36500194-36502343:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8533325195312	2	568.872374	1135.73019	-0.3613	-0.00020554	-2.5588	-0.0014556	-2.9201	-0.0016612	568.8696195808501	102.77	0.36399	102.77	102.55	102.91	0					10	8	2	0	0	0	0.37624	1	10508	10508		34.173	12.213	1	189000			52658	8768	35170	35183	59616	59616					0.16775903753364219
RVPSLRRLDL	10	Unmodified	_RVPSLRRLDL_					0	0	0		ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.9222106933594	3	408.922689	1223.74624	2.7179	0.0011114	-3.8241	-0.0015638	-1.1062	-0.00045236	408.92110256360985	104.72	4.0561	104.68	103.08	107.14	-0.04039					239	96	4	0	0	0	0.86698	1	11512	11512		26.75	5.064	1	3838400			52659	3730	35171	35184	59617	59617					0.1433156519960903
RVPSLRRLDL	10	Unmodified	_RVPSLRRLDL_					0	0	0		ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.92218017578125	3	408.922689	1223.74624	-1.7912	-0.00073246	0.82572	0.00033766	-0.96547	-0.0003948	408.92296036119325	104.35	2.8249	104.52	103.85	106.67	0.17096					215	70	5	0	0	0	0.8651	1	11083	11083		24.232	1.6702	1	5290200			52660	3730	35171	35184	59618	59618					0.1433156519960903
RVPSLRRLDL	10	Unmodified	_RVPSLRRLDL_					0	0	0		ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	613.3846435546875	2	612.880396	1223.74624	0.91302	0.00055957	-2.3998	-0.0014708	-1.4867	-0.00091119	612.8787003590065	104.47	3.5452	104.58	103.94	107.49	0.11684					293	87	6	0	0	0	0.8545	1	11251	11251		36.447	4.9169	1	81912000			52661	3730	35171	35184	59619	59619					0.1433156519960903
RVPSLVPQER	10	Unmodified	_RVPSLVPQER_					0	0	0		ENSG00000149930|ENST00000308893|TAOK2;nc|ENSG00000149930|Q9UL54-3|TAOK2	ENSG00000149930|ENST00000308893|TAOK2	ENSG00000149930|ENST00000308893|TAOK2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.86669921875	2	590.843479	1179.67241	0.89117	0.00052654	-2.6746	-0.0015803	-1.7835	-0.0010538	590.8418523488173	103.37	0.57674	103.5	103.25	103.83	0.12622					23	14	2	0	0	0	0.37624	1	10943	10943		36.447	0	1	706280			52662	5055	35172	35185	59620	59620					0.08975597037260741
RVPSPKPRALS	11	Unmodified	_RVPSPKPRALS_					0	0	0		nc|ENSG00000087460|P84996|GNAS	nc|ENSG00000087460|P84996|GNAS	nc|ENSG00000087460|P84996|GNAS	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3655395507812	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.49	1	116.47	115.97	116.97	-0.02433								0	0	0	0.56276	1	12901	12901		22.58	0.61977	1				52663	14793	35173	35186	59621	59621					0.12459876308275852
RVPTAPAVF	9	Unmodified	_RVPTAPAVF_					0	0	0		ENST00000343916.7_1_20:61461923-61467875:+|nuORF;ENST00000469802.5_1_20:61464351-61467803:+|nuORF;ENST00000462700.5_1_20:61464351-61470045:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.277587890625	2	479.279452	956.544351	-1.1288	-0.000541	-3.1146	-0.0014928	-4.2434	-0.0020338	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.76996	2	7767	7745;7767		33.516	2.2494	1	1311100			52664	10284	35174	35187	59622;59623	59623					0.0643408151404401
RVPTAPAVF	9	Unmodified	_RVPTAPAVF_					0	0	0		ENST00000343916.7_1_20:61461923-61467875:+|nuORF;ENST00000469802.5_1_20:61464351-61467803:+|nuORF;ENST00000462700.5_1_20:61464351-61470045:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2788391113281	2	479.279452	956.544351	-1.0919	-0.00052333	-3.0273	-0.0014509	-4.1192	-0.0019742	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.58151	8	8116	7831;7879;7924;7960;8056;8068;8116;8167		47.916	9.6566	1	4644500			52665	10284	35174	35187	59624;59625;59626;59627;59628;59629;59630;59631	59630					0.0643408151404401
RVPTAPAVF	9	Unmodified	_RVPTAPAVF_					0	0	0		ENST00000343916.7_1_20:61461923-61467875:+|nuORF;ENST00000469802.5_1_20:61464351-61467803:+|nuORF;ENST00000462700.5_1_20:61464351-61470045:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27740478515625	2	479.279452	956.544351	-0.098244	-4.7086E-05	-4.1769	-0.0020019	-4.2751	-0.002049	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.72402	1	8535	8535		38.806	4.6336	1	6799600			52666	10284	35174	35187	59632	59632					0.0643408151404401
RVPTAPAVF	9	Unmodified	_RVPTAPAVF_					0	0	0		ENST00000343916.7_1_20:61461923-61467875:+|nuORF;ENST00000469802.5_1_20:61464351-61467803:+|nuORF;ENST00000462700.5_1_20:61464351-61470045:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773742675781	2	479.279452	956.544351	-0.93682	-0.000449	-3.4908	-0.001673	-4.4276	-0.002122	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.7932	1	8351	8351		25.45	1.2474	1	2046100			52667	10284	35174	35187	59633	59633					0.0643408151404401
RVPTAPAVF	9	Unmodified	_RVPTAPAVF_					0	0	0		ENST00000343916.7_1_20:61461923-61467875:+|nuORF;ENST00000469802.5_1_20:61464351-61467803:+|nuORF;ENST00000462700.5_1_20:61464351-61470045:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27734375	2	479.279452	956.544351	-0.77651	-0.00037216	-3.5504	-0.0017016	-4.3269	-0.0020738	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.69914	4	8852	8459;8615;8852;8894		40.573	11.423	1	7040000			52668	10284	35174	35187	59634;59635;59636;59637	59636					0.0643408151404401
RVPTAPAVF	9	Unmodified	_RVPTAPAVF_					0	0	0		ENST00000343916.7_1_20:61461923-61467875:+|nuORF;ENST00000469802.5_1_20:61464351-61467803:+|nuORF;ENST00000462700.5_1_20:61464351-61470045:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27740478515625	2	479.279452	956.544351	-0.83761	-0.00040145	-3.5851	-0.0017182	-4.4227	-0.0021197	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.76255	1	7950	7950		35.618	2.1253	1	2142700			52669	10284	35174	35187	59638	59638					0.0643408151404401
RVPTAPAVF	9	Unmodified	_RVPTAPAVF_					0	0	0		ENST00000343916.7_1_20:61461923-61467875:+|nuORF;ENST00000469802.5_1_20:61464351-61467803:+|nuORF;ENST00000462700.5_1_20:61464351-61470045:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2793273925781	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.78058	1	8363	8363		30.504	0	1	7438100			52670	10284	35174	35187	59639	59639					0.0643408151404401
RVPTAPAVF	9	Unmodified	_RVPTAPAVF_					0	0	0		ENST00000343916.7_1_20:61461923-61467875:+|nuORF;ENST00000469802.5_1_20:61464351-61467803:+|nuORF;ENST00000462700.5_1_20:61464351-61470045:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	ENST00000343916.7_1_20:61461923-61467875:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27740478515625	2	479.279452	956.544351	-1.5678	-0.00075141	-2.7191	-0.0013032	-4.2869	-0.0020546	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.72402	4	8265	8133;8193;8217;8265		38.806	12.01	1	6441000			52671	10284	35174	35187	59640;59641;59642;59643	59643					0.0643408151404401
RVPTHSSSA	9	Unmodified	_RVPTHSSSA_					0	0	0			REV__ENST00000263674.3_1_11:73019352-73019610:+|nuORF	REV__ENST00000263674.3_1_11:73019352-73019610:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.2417907714844	2	471.243598	940.472643	-0.11027	-5.1965E-05	0.48237	0.00022731	0.3721	0.00017535	471.2436552903768	85.85	3.7163	85.917	84.593	88.309	0.067261					181	85	3	0	0	0	0.62081	1	8640	8640		45.952	0	1	223720	+		52672	24454	35175	35188	59644	59644					2.5420895326533355E-05
RVPTHSSSA	9	Unmodified	_RVPTHSSSA_					0	0	0			REV__ENST00000263674.3_1_11:73019352-73019610:+|nuORF	REV__ENST00000263674.3_1_11:73019352-73019610:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	471.243598	940.472643	-0.06866	-3.2356E-05	0.20056	9.4511E-05	0.1319	6.2155E-05	471.2435764783338	85.812	3.0085	86.256	84.713	87.721	0.44331	0.34101	-0.00028308	NaN	45.952	98	73	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	201840	+		52673	24454	35175	35188							2.5420895326533355E-05
RVPTMGAL	8	Unmodified	_RVPTMGAL_					0	0	0			REV__ENSG00000185477|ENST00000609438|GPRIN3	REV__ENSG00000185477|ENST00000609438|GPRIN3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.59271240234375	2	422.739105	843.463658	-1.7311	-0.0007318	-1.4433	-0.00061016	-3.1744	-0.001342	422.73826769299603	50.372	0.76198	50.372	50.015	50.777	0					43	18	4	0	0	0	0.4196	1	3983	3983		25.45	11.675	1	208680	+		52674	22768	35176	35189	59645	59645					0.03566477199490237
RVPTSTPR	8	Unmodified	_RVPTSTPR_					0	0	0			REV__ENST00000424684.2_1_1:149288589-149288793:+|nuORF	REV__ENST00000424684.2_1_1:149288589-149288793:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2637939453125	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.87922	1	7511	7511		31.955	2.8053	1	1262800	+		52675	26522	35177	35190	59646	59646					0.05435722848858404
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2483825683594	2	406.248486	810.48242	-1.171	-0.0004757	1.5737	0.0006393	0.40272	0.0001636	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.80706	5	8714	8652;8665;8714;8738;8776		38.806	7.4361	1	30016000			52676	10646	35178	35191	59647;59648;59649;59650;59651	59649					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.24847412109375	2	406.248486	810.48242	-1.1354	-0.00046124	1.7834	0.0007245	0.64802	0.00026326	406.24912053143106	91.114	2.1144	91.114	90.563	92.677	0					101	49	3	0	0	0	0.80706	2	8877	8877;8937		26.796	5.0938	1	849560			52677	10646	35178	35191	59652;59653	59652					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.248291015625	2	406.248486	810.48242	-0.96192	-0.00039078	1.5234	0.00061886	0.56144	0.00022808	406.24902234521767	111.59	0.90381	111.59	111.1	112	0					62	31	3	0	0	0	0.80706	1	11600	11600		19.36	3.7238	1	63667			52678	10646	35178	35191	59654	59654					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24847412109375	2	406.248486	810.48242	-0.18704	-7.5983E-05	0.46265	0.00018795	0.27561	0.00011197	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.85277	3	9155	9155;9191;9217		26.796	7.4361	1	50007000			52679	10646	35178	35191	59655;59656;59657	59655					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24822998046875	2	406.248486	810.48242	-0.18684	-7.5904E-05	0.84714	0.00034415	0.6603	0.00026824	406.24872241647245	90.972	2.1991	91.041	90.513	92.712	0.069328					111	52	3	0	0	0	0.80706	2	9323	9323;9360		25.45	3.4903	1	1239900			52680	10646	35178	35191	59658;59659	59658					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24822998046875	2	406.248486	810.48242	1.1517	0.00046786	-0.91843	-0.00037311	0.23322	9.4746E-05	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.87479	1	9409	9409		30.504	5.0535	1	58759000			52681	10646	35178	35191	59660	59660					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2479553222656	2	406.248486	810.48242	2.7178	0.0011041	-2.1477	-0.00087251	0.57008	0.0002316	406.24748869064086	111.72	0.8214	111.69	111.25	112.07	-0.025414					71	31	3	0	0	0	0.82419	1	12333	12333		13.775	4.3048	1	80466			52682	10646	35178	35191	59661	59661					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2494201660156	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.06	1	113.04	112.54	113.54	-0.024811								0	0	0	0.30045	1	12504	12504		40.573	15.122	1				52683	10646	35178	35191	59662	59662					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2486267089844	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.13	1	113.11	112.61	113.61	-0.024811								0	0	0	0.30252	1	12513	12513		19.36	4.6959	1				52684	10646	35178	35191	59663	59663					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24859619140625	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.33	1	113.3	112.8	113.8	-0.024811								0	0	0	0.30252	1	12537	12537		19.36	4.6959	1				52685	10646	35178	35191	59664	59664					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2488098144531	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.49	1	113.46	112.96	113.96	-0.024811								0	0	0	0.29498	1	12557	12557		26.796	5.0938	1				52686	10646	35178	35191	59665	59665					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2494812011719	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.49	1	115.46	114.96	115.96	-0.02433								0	0	0	0.29498	1	12789	12789		26.796	6.3143	1				52687	10646	35178	35191	59666	59666					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2485046386719	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.83	1	117.81	117.31	118.31	-0.02433								0	0	0	0.30125	1	13049	13049		20.482	5.8177	1				52688	10646	35178	35191	59667	59667					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2483215332031	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.75	1	119.73	119.23	120.23	-0.024033								0	0	0	0.29568	1	13263	13263		35.201	6.9464	1				52689	10646	35178	35191	59668	59668					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2484436035156	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.79929	6	9192	9012;9192;9204;9252;9278;9309		33.516	6.7195	1	56664000			52690	10646	35178	35191	59669;59670;59671;59672;59673;59674	59670					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2477111816406	2	406.248486	810.48242	3.1803	0.001292	-2.4584	-0.00099873	0.7219	0.00029327	406.2473607643489	90.704	2.3213	90.75	90.262	92.583	0.046448					123	55	3	0	0	0	0.80706	1	9447	9447		19.36	3.7238	1	1081600			52691	10646	35178	35191	59675	59675					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2486572265625	2	406.248486	810.48242	3.1805	0.0012921	-2.5321	-0.0010287	0.64845	0.00026343	406.2473596194762	111.52	0.96954	111.55	111.15	112.12	0.030388					88	37	3	0	0	0	0.85277	1	12212	12212		25.45	4.9683	1	158570			52692	10646	35178	35191	59676	59676					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2474670410156	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.19	1	115.22	114.72	115.72	0.026466								0	0	0	0.29498	1	12630	12630		26.796	0	1				52693	10646	35178	35191	59677	59677					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.24853515625	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.1	1	116.12	115.62	116.62	0.026466								0	0	0	0.30125	1	12750	12750		20.482	5.8177	1				52694	10646	35178	35191	59678	59678					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2481384277344	2	406.248486	810.48242	-1.8141	-0.00073698	2.0083	0.00081588	0.1942	7.8892E-05	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.79929	3	8959	8873;8959;8996		31.955	6.5047	1	42617000			52695	10646	35178	35191	59679;59680;59681	59680					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2494201660156	2	406.248486	810.48242	-1.8094	-0.00073505	2.5614	0.0010406	0.75204	0.00030551	406.2494235031066	90.628	2.0567	90.845	90.343	92.4	0.21736					110	49	3	0	0	0	0.87922	1	9158	9158		31.955	10.253	1	1054100			52696	10646	35178	35191	59682	59682					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24847412109375	2	406.248486	810.48242	0.62319	0.00025317	-0.33604	-0.00013652	0.28715	0.00011666	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.85277	2	8895	8895;8907		25.45	1.2474	1	38001000			52697	10646	35178	35191	59683;59684	59683					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.24847412109375	2	406.248486	810.48242	-1.9277	-0.00078311	2.2054	0.00089595	0.27775	0.00011283	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.884	2	8819	8819;8856		33.516	6.7195	1	31099000			52698	10646	35178	35191	59685;59686	59685					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.24798583984375	2	406.248486	810.48242	-1.9274	-0.00078302	2.2431	0.00091126	0.31566	0.00012824	406.2493147377016	111.43	0.80137	111.41	111.05	111.85	-0.019882					56	30	2	0	0	0	0.80706	1	11889	11889		19.36	5.5846	1	107510			52699	10646	35178	35191	59687	59687					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2485656738281	2	406.248486	810.48242	1.6373	0.00066514	-1.3363	-0.00054285	0.30103	0.00012229	406.2478594010862	88.139	2.5101	88.588	87.727	90.237	0.44893					205	61	5	0	0	0	0.80706	3	10473	10473;10534;10557		26.796	5.0938	1	28266000			52700	10646	35178	35191	59688;59689;59690	59688					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2492370605469	2	406.248486	810.48242	3.144	0.0012772	-2.6463	-0.0010751	0.49768	0.00020218	406.2473237922933	114.03	1.1173	114.05	113.12	114.24	0.020027					74	50	2	0	0	0	0.85277	1	13762	13762		25.45	0	1	65995			52701	10646	35178	35191	59691	59691					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24920654296875	2	406.248486	810.48242	3.1449	0.0012776	-2.7889	-0.001133	0.35606	0.00014465	406.24727030482205	114.56	0.97545	114.57	114.14	115.12	0.0094528					67	46	2	0	0	0	0.81548	1	13825	13825		20.482	5.8177	1	78189			52702	10646	35178	35191	59692	59692					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2485656738281	2	406.248486	810.48242	-1.235	-0.0005017	1.527	0.00062034	0.29202	0.00011863	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.87922	1	10361	10361		31.955	6.5047	1	38125000			52703	10646	35178	35191	59693	59693					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2482604980469	2	406.248486	810.48242	5.095	0.0020698	-3.4562	-0.0014041	1.6388	0.00066574	406.2464731807243	109.1	0.41043	109.19	108.95	109.36	0.09005					37	17	3	0	0	0	0.85277	1	13285	13285		25.45	2.4077	1	835840			52704	10646	35178	35191	59694	59694					0.06959774885569914
RVPVARGG	8	Unmodified	_RVPVARGG_					0	0	0		ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	ENST00000370733.4_1_6:56911423-56911510:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.248486	810.48242	3.1802	0.0012919	-2.871	-0.0011664	0.30911	0.00012557	406.24725137014576	109.08	0.49633	109.11	108.79	109.29	0.033096	-0.037939	8.0678E-05	NaN	25.45	32	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1125800			52705	10646	35178	35191							0.06959774885569914
RVPVLIIVAKD	11	Unmodified	_RVPVLIIVAKD_					0	0	0			REV__ENSG00000125703|ENST00000317868|ATG4C	REV__ENSG00000125703|ENST00000317868|ATG4C	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.366943359375	2	611.897723	1221.78089	-0.22205	-0.00013587	4.0904	0.0025029	3.8684	0.002367	612.4020738705137	96.717	0.17369	96.717	96.637	96.81	0					5	3	2	0	0	0	0.17839	1	9664	9664		12.207	3.513	1	14318	+		52706	18659	35179	35192	59695	59695					0.17887388287704198
RVPVNLLNS	9	Unmodified	_RVPVNLLNS_					0	0	0		nc|ENSG00000112742|P33981-2|TTK;chr6:80022472-80026381|60|18.62|0.51|5.19|+|ENST00000509894|TTK,TTK;ENSG00000112742|ENST00000369798|TTK	nc|ENSG00000112742|P33981-2|TTK	nc|ENSG00000112742|P33981-2|TTK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3017272949219	2	506.300916	1010.58728	-1.5945	-0.00080728	1.9293	0.00097679	0.33481	0.00016952	506.30185711798276	96.376	1.2072	96.579	96.02	97.227	0.20241					70	27	3	0	0	0	0.76255	1	9894	9894		35.618	2.8059	1	332450			52707	484	35180	35193	59696	59696					0.0824085157147465
RVPVTRCRLLP	11	Unmodified	_RVPVTRCRLLP_					0	0	0		ENST00000481734.1_1_3:39174545-39175936:+|nuORF	ENST00000481734.1_1_3:39174545-39175936:+|nuORF	ENST00000481734.1_1_3:39174545-39175936:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2677001953125	3	437.267691	1308.78124	1.089	0.00047619	-0.88113	-0.00038529	0.20788	9.0897E-05	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.76579	1	4824	4824		18.531	2.0012	1	2745300			52708	12466	35181	35194	59697	59697					0.13920484735899663
RVQALPLW	8	Unmodified	_RVQALPLW_					0	0	0			REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7956848144531	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.87276	1	3805	3805		29.842	0.69198	1	1240000	+		52709	25899	35182	35195	59698	59698					0.08446074267999393
RVQALPLW	8	Unmodified	_RVQALPLW_					0	0	0			REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79571533203125	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.86288	1	4443	4443		26.796	0	1	781720	+		52710	25899	35182	35195	59699	59699					0.08446074267999393
RVQALPLW	8	Unmodified	_RVQALPLW_					0	0	0			REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958068847656	2	491.795269	981.575986	-1.7961	-0.00088329	2.9764	0.0014638	1.1803	0.00058047	491.7966581870457	51.567	1.6539	51.579	50.697	52.351	0.012436					117	46	3	0	0	0	0.86791	1	4391	4391		28.254	5.2118	1	354980	+		52711	25899	35182	35195	59700	59700					0.08446074267999393
RVQALPLW	8	Unmodified	_RVQALPLW_					0	0	0			REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7964172363281	2	491.795269	981.575986	-0.66987	-0.00032944	1.9663	0.00096699	1.2964	0.00063756	491.79618390061455	72.936	0.85153	73.065	72.466	73.317	0.1292					49	29	2	0	0	0	0.86288	1	6691	6691		26.796	0	1	77471	+		52712	25899	35182	35195	59701	59701					0.08446074267999393
RVQALPLW	8	Unmodified	_RVQALPLW_					0	0	0			REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7959899902344	2	491.795269	981.575986	-0.48962	-0.00024079	1.5802	0.00077716	1.0906	0.00053636	491.7959072795416	52.767	1.4912	53.191	52.596	54.087	0.42348					103	35	4	0	0	0	0.86791	1	5353	5353		28.254	0	1	2146400	+		52713	25899	35182	35195	59702	59702					0.08446074267999393
RVQEAVESMVK	11	Unmodified	_RVQEAVESMVK_					0	0	0		ENST00000498665.1_1_2:70527944-70529143:-|nuORF;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A;ENSG00000035141|ENST00000430566|FAM136A	ENST00000498665.1_1_2:70527944-70529143:-|nuORF	ENST00000498665.1_1_2:70527944-70529143:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	638.3358154296875	2	638.339912	1274.66527	-0.09343	-5.964E-05	-1.898	-0.0012116	-1.9915	-0.0012712	638.3384845555476	40.109	0.40036	40.698	40.473	40.874	0.58915					25	9	4	0	0	0	0.00046954	1	3413	3413		131.09	70.969	1	1004300			52714	897	35183	35196	59703	59703					0.03892496374533039
RVQEAVESMVK	11	Unmodified	_RVQEAVESMVK_					0	0	0		ENST00000498665.1_1_2:70527944-70529143:-|nuORF;ENST00000460307.1_1_2:70528513-70529143:-|nuORF;nc|ENSG00000035141|Q96C01|FAM136A;ENSG00000035141|ENST00000430566|FAM136A	ENST00000498665.1_1_2:70527944-70529143:-|nuORF	ENST00000498665.1_1_2:70527944-70529143:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	638.339912	1274.66527	-1.6465	-0.001051	-0.05893	-3.7617E-05	-1.7055	-0.0010887	638.3397509882378	40.191	0.38232	40.559	40.353	40.736	0.36797	-0.069475	0.00054835	NaN	131.09	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	881030			52715	897	35183	35196							0.03892496374533039
RVQGRWKVRK	10	Unmodified	_RVQGRWKVRK_					0	0	0		ENSG00000129988|ENST00000217407|LBP	ENSG00000129988|ENST00000217407|LBP	ENSG00000129988|ENST00000217407|LBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.272705078125	3	438.273945	1311.80001	0.73902	0.00032389	-2.894	-0.0012683	-2.1549	-0.00094446	438.27258626082147	106.07	0.86208	106.16	105.83	106.7	0.099007					90	20	5	0	0	0	0.86225	1	11396	11396		32.751	6.0008	1	9065500			52716	3612	35184	35197	59704	59704					0.15657782421953925
RVQLAIMPV	9	Unmodified	_RVQLAIMPV_					0	0	0			REV__ENST00000558880.1_1_14:103342047-103342973:+|nuORF	REV__ENST00000558880.1_1_14:103342047-103342973:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8087768554688	2	513.810062	1025.60557	-0.38547	-0.00019806	-1.5611	-0.00080208	-1.9465	-0.0010001	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.7932	1	3895	3895		26.796	2.5934	1	1377600	+		52717	28739	35185	35198	59705	59705					0.09379270221802471
RVQLHASA	8	Unmodified	_RVQLHASA_					0	0	0		ENST00000481328.7_1_11:76905078-76923312:+|nuORF	ENST00000481328.7_1_11:76905078-76923312:+|nuORF	ENST00000481328.7_1_11:76905078-76923312:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78802490234375	2	441.251226	880.487899	0.1886	8.322E-05	-3.8548	-0.0017009	-3.6662	-0.0016177	441.25001943331074	39.361	0.16486	39.449	39.365	39.53	0.088375					5	4	2	0	0	0	0.4196	1	2412	2412		33.516	8.0654	1	15051			52718	12457	35186	35199	59706	59706					0.04287453677363828
RVQNSQSLRLI	11	Unmodified	_RVQNSQSLRLI_					0	0	0			REV__nc|ENSG00000145757|Q9BWV2-2|SPATA9	REV__nc|ENSG00000145757|Q9BWV2-2|SPATA9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7710266113281	3	438.59312	1312.75753	0.35026	0.00015362	-3.2309	-0.0014171	-2.8807	-0.0012634	438.59159568258804	37.748	0.53098	38.271	38.062	38.593	0.52236					20	13	3	0	0	0	0.17243	1	3047	3047		22.562	7.8679	1	248760	+		52719	29913	35187	35200	59707	59707					0.11366342503106353
RVQPRGPRP	9	Unmodified	_RVQPRGPRP_					0	0	0		ENST00000506838.5_1_4:668467-669238:+|nuORF	ENST00000506838.5_1_4:668467-669238:+|nuORF	ENST00000506838.5_1_4:668467-669238:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.817138671875	2	531.817599	1061.62064	1.0296	0.00054754	-2.3934	-0.0012729	-1.3639	-0.00072533	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.7932	1	8898	8898		23.042	1.0826	1	1241100			52720	12944	35188	35201	59708	59708					0.09229898134049108
RVQVLLHF	8	Unmodified	_RVQVLLHF_					0	0	0		ENSG00000179165|ENST00000454782|PXT1	ENSG00000179165|ENST00000454782|PXT1	ENSG00000179165|ENST00000454782|PXT1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3079528808594	2	506.308544	1010.60253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.095	1	44.036	43.536	44.536	-0.058262								0	0	0	0.30928	1	3083	3083		46.766	9.738	1				52721	7252	35189	35202	59709	59709					0.09765763159339258
RVQVVGTYR	9	Unmodified	_RVQVVGTYR_					0	0	0		nc|ENSG00000112118|P25205-2|MCM3;ENSG00000112118|ENST00000596288|MCM3	nc|ENSG00000112118|P25205-2|MCM3	nc|ENSG00000112118|P25205-2|MCM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.311767578125	2	539.311815	1076.60908	0.18916	0.00010202	-0.2541	-0.00013704	-0.064934	-3.502E-05	539.3115859052693	30.049	0.75069	30.074	29.733	30.483	0.025013					40	18	3	0	0	0	0.19437	1	1530	1530		75.043	16.261	1	283730			52722	2632	35190	35203	59710	59710					0.07383656320052978
RVQVVGTYR	9	Unmodified	_RVQVVGTYR_					0	0	0		nc|ENSG00000112118|P25205-2|MCM3;ENSG00000112118|ENST00000596288|MCM3	nc|ENSG00000112118|P25205-2|MCM3	nc|ENSG00000112118|P25205-2|MCM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.3117065429688	2	539.311815	1076.60908	0.53142	0.0002866	-0.64744	-0.00034917	-0.11603	-6.2574E-05	539.3113310698433	29.987	0.98581	29.944	29.679	30.665	-0.043095					50	22	3	0	0	0	0.076066	2	1606	1594;1606		98.582	34.414	1	325100			52723	2632	35190	35203	59711;59712	59712					0.07383656320052978
RVQVVGTYR	9	Unmodified	_RVQVVGTYR_					0	0	0		nc|ENSG00000112118|P25205-2|MCM3;ENSG00000112118|ENST00000596288|MCM3	nc|ENSG00000112118|P25205-2|MCM3	nc|ENSG00000112118|P25205-2|MCM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.311279296875	2	539.311815	1076.60908	0.79262	0.00042747	-1.0236	-0.00055204	-0.23097	-0.00012456	539.3111334575082	30.051	0.91296	30.036	29.709	30.622	-0.015167					49	21	3	0	0	0	0.066118	2	1549	1540;1549		101.25	34.823	1	328370			52724	2632	35190	35203	59713;59714	59714					0.07383656320052978
RVQVWFQNR	9	Unmodified	_RVQVWFQNR_					0	0	0		ENSG00000165462|ENST00000298231|PHOX2A;ENSG00000109132|ENST00000226382|PHOX2B;chr5:77630794-77636821|16|27.5|0.22|6.94|-|0|OTP,OTP|1;chrX:641087-644391|51|248.47|0.19|10.39|+|ENST00000381578|SHOX,SHOX;ENSG00000164853|ENST00000316333|UNCX;ENSG00000052850|ENST00000652299|ALX4;ENSG00000134438|ENST00000334889|RAX;ENSG00000156150|ENST00000647563|ALX3;nc|ENSG00000168779|O60902|SHOX2;ENSG00000180318|ENST00000316824|ALX1;ENSG00000171540|ENST00000306422|OTP;ENSG00000168779|ENST00000483851|SHOX2;chrX:640878-640999|52|324.88|0.28|10.18|+|ENST00000381578|SHOX,SHOX;ENSG00000173976|ENST00000555633|RAX2;chrX:634826-640821|51|218.31|0.29|9.55|+|ENST00000381578|SHOX,SHOX;chrX:631174-634618|53|209.15|0.28|9.54|+|ENST00000381578|SHOX,SHOX;ENSG00000185960|ENST00000686671|SHOX;ENSG00000165606|ENST00000374139|DRGX;ENSG00000167157|ENST00000372469|PRRX2;ENSG00000116132|ENST00000239461|PRRX1;nc|ENSG00000292354|O15266-2|SHOX;nc|ENSG00000116132|P54821-2|PRRX1;ENSG00000004848|ENST00000379044|ARX;nc|ENSG00000168779|O60902-3|SHOX2;ENSG00000123576|ENST00000372588|ESX1	ENSG00000165462|ENST00000298231|PHOX2A;nc|ENSG00000168779|O60902-3|SHOX2;ENSG00000123576|ENST00000372588|ESX1	nc|ENSG00000168779|O60902-3|SHOX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	616.8367919921875	2	616.835988	1231.65742	-0.0096447	-5.9492E-06	-1.0617	-0.00065491	-1.0714	-0.00066086	616.8353220365209	44.475	0.61263	44.452	44.22	44.832	-0.023079					29	13	3	0	0	0	0.31972	2	3452	3452;3471		63.306	24.5	1	124470			52725	15083;2450;3282	35191	35204	59715;59716	59715					0.05086149959925024
RVQVWFQNR	9	Unmodified	_RVQVWFQNR_					0	0	0		ENSG00000165462|ENST00000298231|PHOX2A;ENSG00000109132|ENST00000226382|PHOX2B;chr5:77630794-77636821|16|27.5|0.22|6.94|-|0|OTP,OTP|1;chrX:641087-644391|51|248.47|0.19|10.39|+|ENST00000381578|SHOX,SHOX;ENSG00000164853|ENST00000316333|UNCX;ENSG00000052850|ENST00000652299|ALX4;ENSG00000134438|ENST00000334889|RAX;ENSG00000156150|ENST00000647563|ALX3;nc|ENSG00000168779|O60902|SHOX2;ENSG00000180318|ENST00000316824|ALX1;ENSG00000171540|ENST00000306422|OTP;ENSG00000168779|ENST00000483851|SHOX2;chrX:640878-640999|52|324.88|0.28|10.18|+|ENST00000381578|SHOX,SHOX;ENSG00000173976|ENST00000555633|RAX2;chrX:634826-640821|51|218.31|0.29|9.55|+|ENST00000381578|SHOX,SHOX;chrX:631174-634618|53|209.15|0.28|9.54|+|ENST00000381578|SHOX,SHOX;ENSG00000185960|ENST00000686671|SHOX;ENSG00000165606|ENST00000374139|DRGX;ENSG00000167157|ENST00000372469|PRRX2;ENSG00000116132|ENST00000239461|PRRX1;nc|ENSG00000292354|O15266-2|SHOX;nc|ENSG00000116132|P54821-2|PRRX1;ENSG00000004848|ENST00000379044|ARX;nc|ENSG00000168779|O60902-3|SHOX2;ENSG00000123576|ENST00000372588|ESX1	ENSG00000165462|ENST00000298231|PHOX2A;nc|ENSG00000168779|O60902-3|SHOX2;ENSG00000123576|ENST00000372588|ESX1	nc|ENSG00000168779|O60902-3|SHOX2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	616.835988	1231.65742	-0.73321	-0.00045227	-0.014273	-8.8038E-06	-0.74748	-0.00046107	616.8358126903244	44.412	0.73564	44.378	44.147	44.882	-0.033474	-0.041479	0.00057742	NaN	63.306	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124230			52726	15083;2450;3282	35191	35204							0.05086149959925024
RVQVWFQNR	9	Unmodified	_RVQVWFQNR_					0	0	0		ENSG00000165462|ENST00000298231|PHOX2A;ENSG00000109132|ENST00000226382|PHOX2B;chr5:77630794-77636821|16|27.5|0.22|6.94|-|0|OTP,OTP|1;chrX:641087-644391|51|248.47|0.19|10.39|+|ENST00000381578|SHOX,SHOX;ENSG00000164853|ENST00000316333|UNCX;ENSG00000052850|ENST00000652299|ALX4;ENSG00000134438|ENST00000334889|RAX;ENSG00000156150|ENST00000647563|ALX3;nc|ENSG00000168779|O60902|SHOX2;ENSG00000180318|ENST00000316824|ALX1;ENSG00000171540|ENST00000306422|OTP;ENSG00000168779|ENST00000483851|SHOX2;chrX:640878-640999|52|324.88|0.28|10.18|+|ENST00000381578|SHOX,SHOX;ENSG00000173976|ENST00000555633|RAX2;chrX:634826-640821|51|218.31|0.29|9.55|+|ENST00000381578|SHOX,SHOX;chrX:631174-634618|53|209.15|0.28|9.54|+|ENST00000381578|SHOX,SHOX;ENSG00000185960|ENST00000686671|SHOX;ENSG00000165606|ENST00000374139|DRGX;ENSG00000167157|ENST00000372469|PRRX2;ENSG00000116132|ENST00000239461|PRRX1;nc|ENSG00000292354|O15266-2|SHOX;nc|ENSG00000116132|P54821-2|PRRX1;ENSG00000004848|ENST00000379044|ARX;nc|ENSG00000168779|O60902-3|SHOX2;ENSG00000123576|ENST00000372588|ESX1	ENSG00000165462|ENST00000298231|PHOX2A;nc|ENSG00000168779|O60902-3|SHOX2;ENSG00000123576|ENST00000372588|ESX1	nc|ENSG00000168779|O60902-3|SHOX2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	616.835988	1231.65742	-0.86103	-0.00053111	-0.28276	-0.00017442	-1.1438	-0.00070553	616.8357279584768	44.432	0.63525	44.428	44.201	44.837	-0.0039749	0.0087826	0.00024619	NaN	63.306	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140600			52727	15083;2450;3282	35191	35204							0.05086149959925024
RVRAGPKK	8	Unmodified	_RVRAGPKK_					0	0	0		ENSG00000140688|ENST00000327237|RUSF1;nc|ENSG00000140688|Q96GQ5-2|RUSF1;ENST00000568491.1_1_16:31502158-31504599:-|nuORF	ENSG00000140688|ENST00000327237|RUSF1	ENSG00000140688|ENST00000327237|RUSF1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.2945861816406	2	456.29851	910.582468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.577	1	66.542	66.042	67.042	-0.035217								0	0	0	0.31062	1	6368	6368		12.207	0.69583	1				52728	4452	35192	35205	59717	59717					0.1236001221936931
RVRAIVRIN	9	Unmodified	_RVRAIVRIN_					0	0	0			REV__nc|ENSG00000140859|Q9BVG8-4|KIFC3	REV__nc|ENSG00000140859|Q9BVG8-4|KIFC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.8495483398438	2	548.856724	1095.69889	-2.5898	-0.0014215	-3.8954	-0.002138	-6.4852	-0.0035594	548.8543980416836	41.913	1.1773	42.327	41.973	43.151	0.4139					63	29	3	0	0	0	0.69914	1	3700	3700		40.573	3.4135	1	1406900	+		52729	19647	35193	35206	59718	59718					0.15487330719270176
RVRASRRK	8	Unmodified	_RVRASRRK_					0	0	0			REV__ENSG00000099991|ENST00000263119|CABIN1	REV__ENSG00000099991|ENST00000263119|CABIN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.8307495117188	2	514.83104	1027.64753	0.22146	0.00011401	2.5733	0.0013248	2.7947	0.0014388	514.8320535680291	20.785	0.53633	20.155	19.9	20.436	-0.6296					22	12	3	0	0	0	0.84341	1	716	716		24.203	1.1603	1	117210	+		52730	17121	35194	35207	59719	59719					0.13481006745223567
RVREAKTE	8	Unmodified	_RVREAKTE_					0	0	0		ENST00000598497.1_1_19:58598487-58598820:-|nuORF;ENST00000594191.5_1_19:58598487-58609571:-|nuORF;ENST00000596372.1_1_19:58596054-58598820:-|nuORF;nc|ENSG00000121413|Q8TBC5-4|ZSCAN18;nc|ENSG00000121413|Q8TBC5-2|ZSCAN18;ENSG00000121413|ENST00000601144|ZSCAN18;nc|ENSG00000121413|Q8TBC5-3|ZSCAN18	ENST00000598497.1_1_19:58598487-58598820:-|nuORF	ENST00000598497.1_1_19:58598487-58598820:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.78240966796875	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.89494	1	8322	8322		37.159	5.6293	1	569520			52731	3183	35195	35208	59720	59720					0.05187090532001548
RVRGQRPATAR	11	Unmodified	_RVRGQRPATAR_					0	0	0		ENST00000380680.4_1_13:30424065-30424257:-|nuORF	ENST00000380680.4_1_13:30424065-30424257:-|nuORF	ENST00000380680.4_1_13:30424065-30424257:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3772583007812	2	634.376343	1266.73813	1.3188	0.00083664	0.3294	0.00020896	1.6482	0.0010456	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.74763	1	12840	12840		22.58	0.89391	1	12917000			52732	10930	35196	35209	59721	59721					0.11543431002814941
RVRKAFGSNV	10	Unmodified	_RVRKAFGSNV_					0	0	0			REV__ENSG00000121621|ENST00000263181|KIF18A	REV__ENSG00000121621|ENST00000263181|KIF18A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3310546875	2	567.330539	1132.64652	1.497	0.00084932	-2.8559	-0.0016202	-1.3589	-0.00077092	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.85438	1	9494	9494		16.473	2.6978	1	15259000	+		52733	18461	35197	35210	59722	59722					0.0855074758567298
RVRKHILAWKK	11	Unmodified	_RVRKHILAWKK_					0	0	0			REV__ENST00000378062.5_1_X:43808665-43809031:-|nuORF	REV__ENST00000378062.5_1_X:43808665-43809031:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9756164550781	3	478.977129	1433.90956	-1.6535	-0.00079198	-3.9029	-0.0018694	-5.5563	-0.0026614	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.81021	1	3464	3464		9.2118	0	1	252010	+		52734	25885	35198	35211	59723	59723					0.20995788041295782
RVRKHILAWKK	11	Unmodified	_RVRKHILAWKK_					0	0	0			REV__ENST00000378062.5_1_X:43808665-43809031:-|nuORF	REV__ENST00000378062.5_1_X:43808665-43809031:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3097839355469	3	478.977129	1433.90956	-1.6306	-0.00078103	-3.5128	-0.0016826	-5.1434	-0.0024636	478.97540943407233	47.987	1.2617	47.987	47.56	48.821	0					77	38	3	0	0	0	0.81021	1	3769	3769		9.2118	2.8909	1	195490	+		52735	25885	35198	35211	59724	59724					0.20995788041295782
RVRKKTGG	8	Unmodified	_RVRKKTGG_					0	0	0		nc|ENSG00000198399|Q9NZM3-2|ITSN2;ENSG00000198399|ENST00000355123|ITSN2	nc|ENSG00000198399|Q9NZM3-2|ITSN2	nc|ENSG00000198399|Q9NZM3-2|ITSN2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.2485046386719	2	451.288143	900.561733	-0.09234	-4.1672E-05	-2.7273	-0.0012308	-2.8196	-0.0012725	451.28826384069697	68.034	0.086899	68.064	67.996	68.083	0.030571					4	2	2	0	0	0	0.4196	1	6482	6482		18.324	4.5491	1	21325			52736	8269	35199	35212	59725	59725					0.10747421839710114
RVRKLHIREVK	11	Unmodified	_RVRKLHIREVK_					0	0	0		ENST00000530992.1_1_17:32364642-32365872:-|nuORF	ENST00000530992.1_1_17:32364642-32365872:-|nuORF	ENST00000530992.1_1_17:32364642-32365872:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.64422607421875	3	478.644038	1432.91028	-2.2438	-0.001074	-3.8235	-0.0018301	-6.0673	-0.0029041	478.6437803549111	60.343	1.0277	60.374	59.95	60.977	0.031197					60	29	3	0	0	0	0.81407	1	5596	5596		8.4073	0	1	152500			52737	13352	35200	35213	59726	59726					0.21114582690324823
RVRLHPFHVI	10	Unmodified	_RVRLHPFHVI_					0	0	0		ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENSG00000165496|ENST00000298283|RPL10L;ENSG00000147403|ENST00000369817|RPL10;ENST00000482732.1_1_X:153628091-153628283:+|nuORF;ENST00000310599.3_1_6:27179144-27179465:+|nuORF	ENST00000489200.5_1_X:153627802-153628283:+|nuORF	ENST00000489200.5_1_X:153627802-153628283:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.3853149414062	2	637.385648	1272.75674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.63	1	112.74	112.24	113.24	0.10638								0	0	0	0.45132	1	12124	12124		11.511	0.64546	1				52738	4899	35201	35214	59727	59727					0.13127592644718789
RVRLPDSA	8	Unmodified	_RVRLPDSA_					0	0	0			REV__chr8:79767294-79767419|22|10.18|0.35|4.85|-|ENST00000674418|HEY1,HEY1	REV__chr8:79767294-79767419|22|10.18|0.35|4.85|-|ENST00000674418|HEY1,HEY1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26409912109375	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.86288	1	8123	8123		26.796	0.10319	1	4511100	+		52739	15926	35202	35215	59728	59728					0.05435722848858404
RVRLVGLVPKL	11	Unmodified	_RVRLVGLVPKL_					0	0	0			REV__ENST00000483751.5_1_3:49846965-49847449:-|nuORF	REV__ENST00000483751.5_1_3:49846965-49847449:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.4295043945312	2	625.426982	1248.83941	5.9501	0.0037213	1.3068	0.0008173	7.2568	0.0045386	625.4276426088085	108.91	0.50605	109	108.73	109.24	0.090057					40	22	2	0	0	0	0.85653	1	13257	13257		5.5578	2.1478	1	1418100	+		52740	22507	35203	35216	59729	59729					0.224944896528541
RVRMNLAALPL	11	Unmodified	_RVRMNLAALPL_					0	0	0			REV__nc|ENSG00000172936|Q99836-4|MYD88	REV__nc|ENSG00000172936|Q99836-4|MYD88	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3831176757812	2	627.379175	1252.7438	6.5831	0.0041301	-1.1234	-0.0007048	5.4597	0.0034253	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.75495	1	13853	13853		20.947	2.6848	1	94412	+		52741	21867	35204	35217	59730	59730					0.127533934703024
RVRNRLALIEE	11	Unmodified	_RVRNRLALIEE_					0	0	0			REV__ENSG00000186409|ENST00000657597|CCDC30	REV__ENSG00000186409|ENST00000657597|CCDC30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.9382019042969	3	456.94052	1367.79973	0.96691	0.00044182	-2.083	-0.00095179	-1.116	-0.00050997	456.93928438572215	16.159	0.18658	16.237	16.132	16.319	0.077959					9	7	2	0	0	0	0.76892	1	77	77		17.833	4.3252	1	27739	+		52742	22849	35205	35218	59731	59731					0.13054317911473845
RVRPEVGG	8	Unmodified	_RVRPEVGG_					0	0	0		ENST00000313401.3_1_17:30817050-30817605:+|nuORF	ENST00000313401.3_1_17:30817050-30817605:+|nuORF	ENST00000313401.3_1_17:30817050-30817605:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.251708984375	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87922	1	8030	8030		31.955	0	1	2823900			52743	9951	35206	35219	59732	59732					0.04839453677391248
RVRPRAPGPG	10	Unmodified	_RVRPRAPGPG_					0	0	0			REV__ENST00000323249.7_1_5:176881025-176882032:+|nuORF	REV__ENST00000323249.7_1_5:176881025-176882032:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8167724609375	2	531.817599	1061.62064	1.0704	0.00056928	-2.3163	-0.0012319	-1.2459	-0.00066258	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.84112	1	10502	10502		37.159	10.363	1	4490200	+		52744	25029	35207	35220	59733	59733					0.09229898134049108
RVRPTTTSA	9	Unmodified	_RVRPTTTSA_					0	0	0			REV__ENST00000376630.4_1_6:30457571-30457730:+|nuORF	REV__ENST00000376630.4_1_6:30457571-30457730:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7802429199219	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.76255	1	8521	8521		35.618	2.8059	1	569520	+		52745	25841	35208	35221	59734	59734					0.05187090531978811
RVRPVHRPQLV	11	Unmodified	_RVRPVHRPQLV_					0	0	0		ENST00000354725.7_1_7:127292278-127292377:+|nuORF	ENST00000354725.7_1_7:127292278-127292377:+|nuORF	ENST00000354725.7_1_7:127292278-127292377:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.9485168457031	3	452.94935	1355.82622	-1.1932	-0.00054047	-1.3706	-0.00062081	-2.5638	-0.0011613	452.9486366147782	106.8	1.2296	106.95	106.47	107.7	0.14843					124	29	6	0	0	0	0.72374	1	11500	11500		27.644	4.266	1	8171700			52746	10342	35209	35222	59735	59735					0.16254051593455188
RVRPVHRPQLV	11	Unmodified	_RVRPVHRPQLV_					0	0	0		ENST00000354725.7_1_7:127292278-127292377:+|nuORF	ENST00000354725.7_1_7:127292278-127292377:+|nuORF	ENST00000354725.7_1_7:127292278-127292377:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.9491882324219	3	452.94935	1355.82622	0.75692	0.00034285	-3.1103	-0.0014088	-2.3534	-0.001066	452.94782570061545	106.9	1.1199	106.99	106.6	107.72	0.091255					115	26	5	0	0	0	0.76892	1	11516	11516		17.833	0.6664	1	5690500			52747	10342	35209	35222	59736	59736					0.16254051593455188
RVRQPILQY	9	Unmodified	_RVRQPILQY_					0	0	0		ENSG00000133169|ENST00000372728|BEX1;ENSG00000133134|ENST00000372677|BEX2;nc|ENSG00000133134|Q9BXY8-2|BEX2	ENSG00000133169|ENST00000372728|BEX1	ENSG00000133169|ENST00000372728|BEX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.84130859375	2	586.848564	1171.68258	-1.7562	-0.0010306	-1.1032	-0.00064743	-2.8594	-0.0016781	586.8477170020321	43.436	0.4795	44.21	43.984	44.463	0.77379					40	11	4	0	0	0	0.67235	1	3941	3941		42.474	0.078325	1	2449800			52748	3863	35210	35223	59737	59737					0.1036020476253725
RVRQQLTLH	9	Unmodified	_RVRQQLTLH_					0	0	0		ENST00000590993.1_1_19:36883645-36885097:-|nuORF;ENSG00000120784|ENST00000684514|ZFP30;ENSG00000181007|ENST00000392161|ZFP82	ENST00000590993.1_1_19:36883645-36885097:-|nuORF	ENST00000590993.1_1_19:36883645-36885097:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.842529296875	2	575.843813	1149.67307	0.61103	0.00035186	-2.2107	-0.001273	-1.5997	-0.00092115	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.58151	1	9194	9194		47.916	1.9434	1	6623700			52749	3151	35211	35224	59738	59738					0.10422436476983421
RVRRRQRRRWQ	11	Unmodified	_RVRRRQRRRWQ_					0	0	0			REV__ENST00000370332.5_1_1:92949124-92949509:-|nuORF	REV__ENST00000370332.5_1_1:92949124-92949509:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.5450439453125	4	414.003082	1651.98322	-0.69913	-0.00028944	1.7338	0.00071778	1.0346	0.00042834	414.25527434512134	53.992	0.24968	53.929	53.724	53.973	-0.062065					7	5	2	0	0	0	0.18421	1	4451	4451		0.3405	0.028245	1	29589	+		52750	25653	35212	35225	59739	59739					0.18331149256323442
RVRRRQRRRWQ	11	Unmodified	_RVRRRQRRRWQ_					0	0	0			REV__ENST00000370332.5_1_1:92949124-92949509:-|nuORF	REV__ENST00000370332.5_1_1:92949124-92949509:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		4	414.003082	1651.98322	-1.8759	-0.00077661	1.7297	0.00071612	-0.14613	-6.0499E-05	414.255475913786	53.739	0.17305	53.787	53.716	53.889	0.047806	-0.071292	-3.8709E-06	NaN	0.3405	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44201	+		52751	25653	35212	35225							0.18331149256323442
RVRRSQML	8	Unmodified	_RVRRSQML_					0	0	0			REV__ENST00000488952.1_1_2:96809564-96810280:-|nuORF	REV__ENST00000488952.1_1_2:96809564-96810280:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.30601	1044.59747	-1.4863	-0.0007778	-3.2992	-0.0017265	-4.7855	-0.0025043	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.87922	1	8274	8274		31.955	0.42505	1	3566700	+		52752	20582	35213	35226	59740	59740					0.0769513602506322
RVRSGVLTY	9	Unmodified	_RVRSGVLTY_					0	0	0			REV__ENSG00000121904|ENST00000373381|CSMD2	REV__ENSG00000121904|ENST00000373381|CSMD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.0115966796875	2	525.806365	1049.59818	-0.26358	-0.00013859	-0.92139	-0.00048447	-1.185	-0.00062306	525.80580371857	15.465	0.20931	15.514	15.404	15.614	0.04908					13	8	3	0	0	0	0.20789	1	45	45		29.15	3.6994	1	60589	+		52753	18472	35214	35227	59741	59741					0.07536253945772842
RVRSGVLTY	9	Unmodified	_RVRSGVLTY_					0	0	0			REV__ENSG00000121904|ENST00000373381|CSMD2	REV__ENSG00000121904|ENST00000373381|CSMD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	525.806365	1049.59818	0.10644	5.5966E-05	-1.6425	-0.00086363	-1.5361	-0.00080767	525.8053268882155	15.69	0.21906	15.747	15.654	15.873	0.057872	0.11652	-0.00039091	NaN	29.15	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124480	+		52754	18472	35214	35227							0.07536253945772842
RVRSMSGG	8	Unmodified	_RVRSMSGG_					0	0	0		ENST00000497886.5_1_16:2128976-2136835:+|nuORF;nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2	ENST00000497886.5_1_16:2128976-2136835:+|nuORF	ENST00000497886.5_1_16:2128976-2136835:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	425.2219543457031	2	425.221611	848.42867	-1.7167	-0.00073	1.9789	0.00084148	0.26218	0.00011148	425.22235708196115	88.248	1.1908	88.449	88.059	89.25	0.20156					72	28	3	0	0	0	0.87064	1	8750	8750		29.15	2.3535	1	1012800			52755	2062	35215	35228	59742	59742					-0.001607656084388509
RVRSRLNRH	9	Unmodified	_RVRSRLNRH_					0	0	0		ENSG00000159905|ENST00000587682|ZNF221	ENSG00000159905|ENST00000587682|ZNF221	ENSG00000159905|ENST00000587682|ZNF221	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3570556640625	2	597.357954	1192.70135	-0.84393	-0.00050413	-2.4152	-0.0014427	-3.2591	-0.0019469	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.78058	1	11015	11015		30.504	6.3009	1	1407500			52756	5551	35216	35229	59743	59743					0.11271179176924306
RVRTKTVKK	9	Unmodified	_RVRTKTVKK_					0	0	0		chr15:82540132-83396235|21|58.95|0.0|22.49|-|0|RPS17,None|1;ENST00000559273.1_1_15:83208730-83209179:-|nuORF;ENST00000560639.1_1_15:83207600-83209179:-|nuORF;ENSG00000182774|ENST00000647841|RPS17	chr15:82540132-83396235|21|58.95|0.0|22.49|-|0|RPS17,None|1	chr15:82540132-83396235|21|58.95|0.0|22.49|-|0|RPS17,None|1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.3721313476562	2	558.372207	1114.72986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.752	1	15.153	14.653	15.653	-0.59873								0	0	0	0.30778	1	44	44		27.882	3.6795	1				52757	195	35217	35230	59744	59744					0.17708484033505556
RVRVKRPPNRL	11	Unmodified	_RVRVKRPPNRL_					0	0	0		chr13:43059714-43068930|23|25.22|0.21|6.93|+|0|TE_info:LTR7B,LTR7B_dup599,ERV1,LTR,donor,-,43059672,43059714|None,DNAJC15|1	chr13:43059714-43068930|23|25.22|0.21|6.93|+|0|TE_info:LTR7B,LTR7B_dup599,ERV1,LTR,donor,-,43059672,43059714|None,DNAJC15|1	chr13:43059714-43068930|23|25.22|0.21|6.93|+|0|TE_info:LTR7B,LTR7B_dup599,ERV1,LTR,donor,-,43059672,43059714|None,DNAJC15|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.80108642578125	3	464.300383	1389.87932	-2.0597	-0.00095633	-3.1168	-0.0014471	-5.1765	-0.0024034	464.63372462871706	43.11	0.84712	43.884	43.416	44.263	0.7738					42	20	3	0	0	0	0.17955	1	3837	3837		8.7993	5.588	1	226200			52758	157	35218	35231	59745	59745					0.19997429376121545
RVRVRGVS	8	Unmodified	_RVRVRGVS_					0	0	0			REV__nc|ENSG00000104852|P08621-4|SNRNP70	REV__nc|ENSG00000104852|P08621-4|SNRNP70	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7909240722656	2	464.793592	927.572632	-1.9025	-0.00088428	-4.2508	-0.0019758	-6.1534	-0.00286	464.7914872059108	34.459	1.5924	34.459	34.009	35.601	0					104	42	3	0	0	0	0.85277	3	1946	1872;1909;1946		33.516	6.7195	1	277220	+		52759	28512	35219	35232	59746;59747;59748	59748					0.10594824214001619
RVSFPMTV	8	Unmodified	_RVSFPMTV_					0	0	0			REV__ENSG00000164163|ENST00000296577|ABCE1	REV__ENSG00000164163|ENST00000296577|ABCE1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.7532958984375	2	468.752213	935.489873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.369	1	21.437	20.937	21.937	0.068251								0	0	0	0.29498	1	567	567		26.796	1.3459	1		+		52760	21041	35220	35233	59749	59749					0.019547463709841395
RVSLSPWL	8	Unmodified	_RVSLSPWL_					0	0	0		ENST00000427993.7_3_1:100435608-100440614:+|nuORF	ENST00000427993.7_3_1:100435608-100440614:+|nuORF	ENST00000427993.7_3_1:100435608-100440614:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27740478515625	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.85277	1	8194	8194		25.45	0	1	7438100			52761	11588	35221	35234	59750	59750					0.0643408151404401
RVSQSTSSF	9	Unmodified	_RVSQSTSSF_					0	0	0			REV__ENST00000378509.8_1_7:133979072-133979261:-|nuORF	REV__ENST00000378509.8_1_7:133979072-133979261:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.7469482421875	2	499.748713	997.482873	-0.072024	-3.5994E-05	-3.9288	-0.0019634	-4.0008	-0.0019994	499.7467280692381	68.276	1.7033	68.661	68.028	69.731	0.38482					79	40	4	0	0	0	0.77696	1	7516	7516		31.53	1.0262	1	539910	+		52762	25897	35222	35235	59751	59751					-0.01596894975887153
RVSRLRPH	8	Unmodified	_RVSRLRPH_					0	0	0		ENST00000601340.5_1_19:50059010-50059717:-|nuORF	ENST00000601340.5_1_19:50059010-50059717:-|nuORF	ENST00000601340.5_1_19:50059010-50059717:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.81207275390625	2	510.812316	1019.61008	4.704	0.0024028	-3.382	-0.0017276	1.3219	0.00067527	510.81038527976574	106.02	0.73642	106.21	105.87	106.6	0.18647					70	29	3	0	0	0	0.87064	1	12999	12999		29.15	0	1	1170500			52763	14389	35223	35236	59752	59752					0.10105915479607575
RVSRSVLGG	9	Unmodified	_RVSRSVLGG_					0	0	0		ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	ENST00000354179.8_2_5:176723055-176723301:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7776184082031	2	465.777608	929.540663	-0.22002	-0.00010248	0.31699	0.00014765	0.096969	4.5166E-05	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.67345	1	9512	9512		42.396	1.618	1	1042300			52764	10333	35224	35237	59753	59753					0.07307411740191583
RVSRVPEA	8	Unmodified	_RVSRVPEA_					0	0	0			REV__ENSG00000137962|ENST00000260526|ARHGAP29	REV__ENSG00000137962|ENST00000260526|ARHGAP29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2635498046875	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.87479	1	8387	8387		30.504	0	1	4511100	+		52765	19426	35225	35238	59754	59754					0.05435722848858404
RVSRVPEA	8	Unmodified	_RVSRVPEA_					0	0	0			REV__ENSG00000137962|ENST00000260526|ARHGAP29	REV__ENSG00000137962|ENST00000260526|ARHGAP29	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2633972167969	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.87479	1	8213	8213		30.504	2.6214	1	4597500	+		52766	19426	35225	35238	59755	59755					0.05435722848858404
RVSRVPEA	8	Unmodified	_RVSRVPEA_					0	0	0			REV__ENSG00000137962|ENST00000260526|ARHGAP29	REV__ENSG00000137962|ENST00000260526|ARHGAP29	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2641906738281	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.89043	1	9540	9540		35.618	2.1253	1	4402400	+		52767	19426	35225	35238	59756	59756					0.05435722848858404
RVSSQLIQ	8	Unmodified	_RVSSQLIQ_					0	0	0		ENSG00000180787|ENST00000318833|ZFP3	ENSG00000180787|ENST00000318833|ZFP3	ENSG00000180787|ENST00000318833|ZFP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7718811035156	2	465.771991	929.529429	0.33908	0.00015793	-0.53604	-0.00024967	-0.19696	-9.1736E-05	465.77168744276247	22.614	1.4161	22.196	21.61	23.026	-0.41879					72	32	4	0	0	0	0.37302	2	911	911;932		93.195	5.5138	1	2020400			52768	7348	35226	35239	59757;59758	59757					0.06184589646045424
RVSSRLVSA	9	Unmodified	_RVSSRLVSA_					0	0	0			REV__ENST00000559934.5_1_15:78833129-78833189:+|nuORF	REV__ENST00000559934.5_1_15:78833129-78833189:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906494140625	2	487.790715	973.566878	-0.085473	-4.1693E-05	-0.089202	-4.3512E-05	-0.17467	-8.5205E-05	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.78983	1	8567	8567		27.882	1.1893	1	1889700	+		52769	28751	35227	35240	59759	59759					0.07903680911670108
RVSTRKIT	8	Unmodified	_RVSTRKIT_					0	0	0		ENST00000381714.7_1_15:77713290-77740097:+|nuORF	ENST00000381714.7_1_15:77713290-77740097:+|nuORF	ENST00000381714.7_1_15:77713290-77740097:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.79998779296875	2	480.801083	959.587613	-1.6775	-0.00080655	1.1222	0.00053954	-0.55533	-0.00026701	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.88915	1	10098	10098		35.201	1.0282	1	17379000			52770	10960	35228	35241	59760	59760					0.1062027129131593
RVSVRNVT	8	Unmodified	_RVSVRNVT_					0	0	0			REV__chr1:225567414-225595208|25|16.8|0.41|5.35|-|2|TE_info:AluSg,AluSg_dup2945,Alu,SINE,donor,+,225595208,225595346|ENAH,None|2	REV__chr1:225567414-225595208|25|16.8|0.41|5.35|-|2|TE_info:AluSg,AluSg_dup2945,Alu,SINE,donor,+,225595208,225595346|ENAH,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7775573730469	2	465.777608	929.540663	0.60386	0.00028126	-0.75167	-0.00035011	-0.14781	-6.8848E-05	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.89043	1	7763	7763		35.618	3.6634	1	1082300	+		52771	15439	35229	35242	59761	59761					0.07307411740191583
RVSVRTWWRWL	11	Unmodified	_RVSVRTWWRWL_					0	0	0		nc|ENSG00000164284|Q8TAA5-2|GRPEL2	nc|ENSG00000164284|Q8TAA5-2|GRPEL2	nc|ENSG00000164284|Q8TAA5-2|GRPEL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.82861328125	3	515.624755	1543.85244	0.22624	0.00011666	1.9512	0.0010061	2.1775	0.0011228	515.9605116506983	82.953	0.24192	83.427	83.295	83.537	0.47383					7	5	2	0	0	0	0.18343	1	9646	9646		5.4129	2.2016	1	32155			52772	15057	35230	35243	59762	59762					0.10226320764923003
RVSYRTVTVL	10	Unmodified	_RVSYRTVTVL_					0	0	0		nc|ENSG00000160963|Q96A83-2|COL26A1;ENSG00000160963|ENST00000313669|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8563842773438	2	597.35368	1192.69281	0.9357	0.00055895	2.5932	0.001549	3.5289	0.002108	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.67571	2	9476	9476;9720		45.972	3.108	1	19058000			52773	5622	35231	35244	59763;59764	59763					0.10416767697097384
RVTASRPGP	9	Unmodified	_RVTASRPGP_					0	0	0			REV__ENSG00000008300|ENST00000164024|CELSR3	REV__ENSG00000008300|ENST00000164024|CELSR3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76971435546875	2	470.769783	939.525013	-1.6346	-0.00076952	0.1281	6.0304E-05	-1.5065	-0.00070922	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.76255	1	4175	4175		35.618	0	1	1359900	+		52774	16134	35232	35245	59765	59765					0.05283125223149909
RVTIGPDKVN	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RVTIGPDKVN_					1	0	0			REV__ENST00000562275.5_1_16:89353821-89353923:-|nuORF	REV__ENST00000562275.5_1_16:89353821-89353923:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.8214721679688	2	570.822212	1139.62987	-0.23349	-0.00013328	3.926	0.0022411	3.6925	0.0021078	570.8242504843668	61.573	0.86258	61.603	61.338	62.201	0.029575					86	37	3	0	0	0	0.42897	1	5756	5756		61.691	8.7546	1	572170	+		52775	28795	35233	35246	59766	59766					0.06564201909054646
RVTIGPDKVN	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RVTIGPDKVN_					1	0	0			REV__ENST00000562275.5_1_16:89353821-89353923:-|nuORF	REV__ENST00000562275.5_1_16:89353821-89353923:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.8222045898438	2	570.822212	1139.62987	0.51778	0.00029556	3.1777	0.0018139	3.6954	0.0021094	570.8238767890401	61.345	0.78047	61.464	61.349	62.129	0.11901					67	35	2	0	0	0	0.4503	1	5376	5376		59.931	20.678	1	786490	+		52776	28795	35233	35246	59767	59767					0.06564201909054646
RVTIGPDKVN	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RVTIGPDKVN_					1	0	0			REV__ENST00000562275.5_1_16:89353821-89353923:-|nuORF	REV__ENST00000562275.5_1_16:89353821-89353923:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	570.822212	1139.62987	-0.94444	-0.00053911	5.6434	0.0032214	4.6989	0.0026822	571.3268869011353	61.808	1.0822	61.808	61.601	62.683	0	0.19509	0.0017507	NaN	61.691	111	51	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	549870	+		52777	28795	35233	35246							0.06564201909054646
RVTKTKDG	8	Unmodified	_RVTKTKDG_					0	0	0		nc|ENSG00000173559|Q96AH0-3|NABP1;ENSG00000173559|ENST00000425611|NABP1;ENSG00000139579|ENST00000267023|NABP2	nc|ENSG00000173559|Q96AH0-3|NABP1;ENSG00000139579|ENST00000267023|NABP2	ENSG00000139579|ENST00000267023|NABP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.76324462890625	2	452.764166	903.513779	0.15107	6.8398E-05	-2.3595	-0.0010683	-2.2085	-0.00099991	452.7631190249679	39.832	0.73378	39.802	39.439	40.173	-0.03027					38	17	3	0	0	0	0.91472	1	2790	2790		44.117	1.7207	1	134080			52778	4380;6867	35234	35247	59768	59768					0.05816303128983691
RVTKTYKR	8	Unmodified	_RVTKTYKR_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|O94854|MACF1;ENST00000497964.1_1_1:39924047-39924203:+|nuORF	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3235473632812	2	526.322183	1050.62981	0.45815	0.00024113	4.3609	0.0022953	4.8191	0.0025364	526.3243663512045	59.761	1.5451	59.877	59.01	60.555	0.1157					98	50	2	0	0	0	0.87064	1	5148	5148		29.15	4.6304	1	175310			52779	3510	35235	35248	59769	59769					0.10652246699669377
RVTQLWHRKPK	11	Unmodified	_RVTQLWHRKPK_					0	0	0		chr22:21106245-21115929|22|16.09|0.43|5.21|+|2|TE_info:L1MA6,L1MA6_dup5341,L1,LINE,donor,-,21105750,21106245|None,BCRP2|4	chr22:21106245-21115929|22|16.09|0.43|5.21|+|2|TE_info:L1MA6,L1MA6_dup5341,L1,LINE,donor,-,21105750,21106245|None,BCRP2|4	chr22:21106245-21115929|22|16.09|0.43|5.21|+|2|TE_info:L1MA6,L1MA6_dup5341,L1,LINE,donor,-,21105750,21106245|None,BCRP2|4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.6457824707031	3	483.624755	1447.85244	-1.5939	-0.00077084	-3.7099	-0.0017942	-5.3038	-0.0025651	483.62309760232876	44.242	0.43388	45.086	44.945	45.379	0.84438					14	10	2	0	0	0	0.17882	1	4106	4106		7.6794	0	1	199060			52780	379	35236	35249	59770	59770					0.14642320764892247
RVTRLTEAS	9	Unmodified	_RVTRLTEAS_					0	0	0			REV__nc|ENSG00000162913|Q96MR7-2|OBSCN-AS1	REV__nc|ENSG00000162913|Q96MR7-2|OBSCN-AS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7925415039062	2	516.793455	1031.57236	0.68918	0.00035616	-0.86967	-0.00044944	-0.18049	-9.3276E-05	516.7928457935418	86.219	2.6893	86.368	84.865	87.554	0.14902					141	62	3	0	0	0	0.76764	1	8478	8478		34.173	1.3601	1	296930	+		52781	29978	35237	35250	59771	59771					0.057833597034687045
RVTTIARN	8	Unmodified	_RVTTIARN_					0	0	0		ENSG00000100934|ENST00000307712|SEC23A;nc|ENSG00000100934|Q15436-2|SEC23A;ENSG00000101310|ENST00000650089|SEC23B	ENSG00000100934|ENST00000307712|SEC23A;ENSG00000101310|ENST00000650089|SEC23B	ENSG00000100934|ENST00000307712|SEC23A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7774353027344	2	465.777608	929.540663	-0.11871	-5.5291E-05	0.041983	1.9555E-05	-0.076723	-3.5736E-05	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.89494	1	8249	8249		37.159	2.9866	1	1083800			52782	1886;1928	35238	35251	59772	59772					0.07307411740180214
RVTVILFSE	9	Unmodified	_RVTVILFSE_					0	0	0			REV__ENSG00000171487|ENST00000390649|NLRP5	REV__ENSG00000171487|ENST00000390649|NLRP5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.3079223632812	2	532.310949	1062.60735	0.024653	1.3123E-05	-0.30627	-0.00016303	-0.28162	-0.00014991	532.3106644683548	34.756	0.64537	34.7	34.401	35.047	-0.056385					27	14	2	0	0	0	0.20789	1	2224	2224		21.96	5.4867	1	143800	+		52783	21735	35239	35252	59773	59773					0.0785460251142922
RVVAHLFSSHA	11	Unmodified	_RVVAHLFSSHA_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.3382568359375	2	612.335821	1222.65709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.067	1	57.172	56.672	57.672	0.1055								0	0	0	0.56276	1	4828	4828		24.519	3.682	1				52784	1679	35240	35253	59774	59774					0.05466730240073048
RVVALPARHT	10	Unmodified	_RVVALPARHT_					0	0	0		ENST00000372530.8_2_6:43395757-43400350:+|nuORF	ENST00000372530.8_2_6:43395757-43400350:+|nuORF	ENST00000372530.8_2_6:43395757-43400350:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3411865234375	2	560.340907	1118.66726	2.2618	0.0012674	-3.4816	-0.0019509	-1.2198	-0.00068351	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.86763	1	12460	12460		26.693	1.1189	1	14759000			52785	10704	35241	35254	59775	59775					0.11267337965296065
RVVANSKQS	9	Unmodified	_RVVANSKQS_					0	0	0		ENST00000480427.1_1_12:125420028-125420310:-|nuORF	ENST00000480427.1_1_12:125420028-125420310:-|nuORF	ENST00000480427.1_1_12:125420028-125420310:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7804260253906	2	494.780348	987.546142	1.0619	0.0005254	-1.0199	-0.00050462	0.042	2.0781E-05	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.7932	1	8899	8899		21.96	2.5999	1	657500			52786	12436	35242	35255	59776	59776					0.05187090532001548
RVVATRAAS	9	Unmodified	_RVVATRAAS_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774963378906	2	465.777608	929.540663	0.52254	0.00024339	-0.63525	-0.00029589	-0.11271	-5.2499E-05	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.78528	1	8254	8254		29.17	0.020503	1	1330400	+		52787	24039	35243	35256	59777	59777					0.07307411740180214
RVVATRAAS	9	Unmodified	_RVVATRAAS_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7776794433594	2	465.777608	929.540663	-1.0371	-0.00048307	0.85648	0.00039893	-0.18065	-8.4142E-05	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.77696	1	7808	7808		31.53	0	1	1384500	+		52788	24039	35243	35256	59778	59778					0.07307411740180214
RVVDGKDLTT	10	Unmodified	_RVVDGKDLTT_					0	0	0		ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;ENST00000438741.1_1_3:10076402-10082221:+|nuORF	ENSG00000144554|ENST00000675286|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3060913085938	2	552.306395	1102.59824	0.26261	0.00014504	-0.18156	-0.00010027	0.081052	4.4766E-05	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.86218	1	9372	9372		32.812	3.6424	1	1950800			52789	4717	35244	35257	59779	59779					0.05104209155092576
RVVFQPPAV	9	Unmodified	_RVVFQPPAV_					0	0	0			REV__ENSG00000185008|ENST00000696593|ROBO2	REV__ENSG00000185008|ENST00000696593|ROBO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.79656982421875	2	506.800552	1011.58655	-0.86379	-0.00043777	0.93984	0.00047631	0.076052	3.8543E-05	506.8010240498416	43.849	2.352	43.815	42.486	44.838	-0.033474					86	55	2	0	0	0	0.62081	1	3428	3428		45.952	6.9305	1	326070	+		52790	22725	35245	35258	59780	59780					0.08122056922422871
RVVFRRLVSD	10	Unmodified	_RVVFRRLVSD_					0	0	0			REV__ENST00000463900.5_1_2:74756150-74756756:-|nuORF	REV__ENST00000463900.5_1_2:74756150-74756756:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.8712768554688	2	623.872571	1245.73059	-0.065768	-4.1031E-05	-3.3413	-0.0020845	-3.407	-0.0021255	623.8703810158217	104.89	2.4155	104.89	104.43	106.84	0					131	56	4	0	0	0	0.82886	1	10828	10828		37.812	12.237	1	1348200	+		52791	18107	35246	35259	59781	59781					0.11755278682539938
RVVGEKQLPQE	11	Unmodified	_RVVGEKQLPQE_					0	0	0		ENSG00000053900|ENST00000315368|ANAPC4;nc|ENSG00000053900|Q9UJX5-3|ANAPC4;nc|ENSG00000053900|Q9UJX5-2|ANAPC4	ENSG00000053900|ENST00000315368|ANAPC4	ENSG00000053900|ENST00000315368|ANAPC4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8621215820312	2	641.859326	1281.7041	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.68	1	119.71	119.21	120.21	0.026466								0	0	0	0.56276	1	13167	13167		35.152	3.6222	1				52792	1012	35247	35260	59782	59782					0.07451545000549231
RVVGSAHTG	9	Unmodified	_RVVGSAHTG_					0	0	0			REV__ENST00000344710.9_2_22:31835700-31835829:-|nuORF	REV__ENST00000344710.9_2_22:31835700-31835829:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.24078369140625	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.78058	1	7863	7863		30.504	2.6214	1	1219900	+		52793	25305	35248	35261	59783	59783					0.021228632977113193
RVVGSAHTG	9	Unmodified	_RVVGSAHTG_					0	0	0			REV__ENST00000344710.9_2_22:31835700-31835829:-|nuORF	REV__ENST00000344710.9_2_22:31835700-31835829:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24078369140625	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.69624	1	7735	7735		40.778	3.6191	1	1094000	+		52794	25305	35248	35261	59784	59784					0.021228632977113193
RVVGVIEKVQL	11	Unmodified	_RVVGVIEKVQL_					0	0	0		nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1;ENST00000555834.5_1_14:75375979-75389943:-|nuORF;ENSG00000198208|ENST00000557413|RPS6KL1	nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1	nc|ENSG00000198208|Q9Y6S9-4|RPS6KL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.93218994140625	3	413.930962	1238.77106	0.19564	8.098E-05	3.7972	0.0015718	3.9928	0.0016527	413.93253835270247	43.14	1.6907	43.113	41.995	43.686	-0.026768					75	40	2	0	0	0	0.76251	1	3255	3255		19.263	0.73163	1	425020			52795	8255	35249	35262	59785	59785					0.161222002823024
RVVKFIDLII	10	Unmodified	_RVVKFIDLII_					0	0	0		ENST00000366645.1_1_1:231469469-231469601:-|nuORF	ENST00000366645.1_1_1:231469469-231469601:-|nuORF	ENST00000366645.1_1_1:231469469-231469601:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.7850646972656	3	405.932303	1214.77508	-1.9563	-0.00079414	3.4422	0.0013973	1.4859	0.00060316	405.93357745510787	34.881	1.1853	34.881	34.377	35.563	0					74	31	4	0	0	0	0.37624	1	1982	1982		28.081	16.446	1	146950			52796	10514	35250	35263	59786	59786					0.17628289776052952
RVVKFIDLII	10	Unmodified	_RVVKFIDLII_					0	0	0		ENST00000366645.1_1_1:231469469-231469601:-|nuORF	ENST00000366645.1_1_1:231469469-231469601:-|nuORF	ENST00000366645.1_1_1:231469469-231469601:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.785400390625	3	405.932303	1214.77508	-0.16088	-6.5308E-05	1.687	0.0006848	1.5261	0.00061949	405.9329307695469	35.049	1.0555	35.037	34.643	35.699	-0.012203					57	25	3	0	0	0	0.37624	1	2114	2114		22.58	9.7679	1	160250			52797	10514	35250	35263	59787	59787					0.17628289776052952
RVVKFIDLII	10	Unmodified	_RVVKFIDLII_					0	0	0		ENST00000366645.1_1_1:231469469-231469601:-|nuORF	ENST00000366645.1_1_1:231469469-231469601:-|nuORF	ENST00000366645.1_1_1:231469469-231469601:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7847900390625	3	405.932303	1214.77508	-0.69769	-0.00028321	2.1895	0.00088877	1.4918	0.00060556	405.93309911679836	35.084	1.202	35.027	34.494	35.696	-0.056385					68	27	3	0	0	0	0.37624	1	2264	2264		15.333	1.2471	1	177370			52798	10514	35250	35263	59788	59788					0.17628289776052952
RVVKFIDLII	10	Unmodified	_RVVKFIDLII_					0	0	0		ENST00000366645.1_1_1:231469469-231469601:-|nuORF	ENST00000366645.1_1_1:231469469-231469601:-|nuORF	ENST00000366645.1_1_1:231469469-231469601:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7851867675781	3	405.932303	1214.77508	1.688	0.00068519	-0.37912	-0.0001539	1.3088	0.0005313	405.93211193822134	34.124	1.3458	34.335	33.82	35.166	0.21002					61	32	3	0	0	0	0.37624	1	2450	2450		28.081	17.978	1	452800			52799	10514	35250	35263	59789	59789					0.17628289776052952
RVVKFIDLII	10	Unmodified	_RVVKFIDLII_					0	0	0		ENST00000366645.1_1_1:231469469-231469601:-|nuORF	ENST00000366645.1_1_1:231469469-231469601:-|nuORF	ENST00000366645.1_1_1:231469469-231469601:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78533935546875	3	405.932303	1214.77508	1.0143	0.00041172	0.3123	0.00012677	1.3266	0.00053849	405.93236870603084	34.078	1.1444	34.383	33.953	35.097	0.30495					59	27	3	0	0	0	0.37624	1	2488	2488		16.717	7.0117	1	443930			52800	10514	35250	35263	59790	59790					0.17628289776052952
RVVKGKVDS	9	Unmodified	_RVVKGKVDS_					0	0	0		ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.30096435546875	2	494.300916	986.587279	-0.82421	-0.00040741	0.56645	0.00028	-0.25775	-0.00012741	494.3011394049625	97.613	4.008	97.613	96.986	100.99	0					359	95	6	0	0	0	0.74721	1	9925	9925		37.159	8.0096	1	29815000			52801	10705	35251	35264	59791	59791					0.09344851571484014
RVVKGKVDS	9	Unmodified	_RVVKGKVDS_					0	0	0		ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.30010986328125	2	494.300916	986.587279	-0.7737	-0.00038244	0.64363	0.00031815	-0.13007	-6.4295E-05	494.3011465997647	101.19	1.3573	101.19	100.82	102.17	0					71	32	4	0	0	0	0.78983	1	10284	10284		27.882	0	1	465620			52802	10705	35251	35264	59792	59792					0.09344851571484014
RVVKGKVDS	9	Unmodified	_RVVKGKVDS_					0	0	0		ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.29986572265625	2	494.300916	986.587279	-0.67602	-0.00033416	0.92708	0.00045826	0.25106	0.0001241	494.30124148476517	112.99	2.27	113.02	112.76	115.03	0.028252					102	60	2	0	0	0	0.78536	1	12326	12326		29.15	0	1	376590			52803	10705	35251	35264	59793	59793					0.09344851571484014
RVVKGKVDS	9	Unmodified	_RVVKGKVDS_					0	0	0		ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.30059814453125	2	494.300916	986.587279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.333	1	15.25	14.75	15.75	-0.083363								0	0	0	0.32159	1	29	29		23.042	3.939	1				52804	10705	35251	35264	59794	59794					0.09344851571484014
RVVKGKVDS	9	Unmodified	_RVVKGKVDS_					0	0	0		ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3007507324219	2	494.300916	986.587279	-0.58165	-0.00028751	0.50872	0.00025146	-0.072933	-3.6051E-05	494.30110008283356	100.79	1.5343	100.99	100.36	101.9	0.2058					82	36	3	0	0	0	0.7932	1	10517	10517		23.042	0	1	820880			52805	10705	35251	35264	59795	59795					0.09344851571484014
RVVKGKVDS	9	Unmodified	_RVVKGKVDS_					0	0	0		ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3008728027344	2	494.300916	986.587279	0.76681	0.00037903	-1.1549	-0.00057088	-0.38812	-0.00019185	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.77244	1	9986	9986		32.812	2.3088	1	52135000			52806	10705	35251	35264	59796	59796					0.09344851571484014
RVVKGKVDS	9	Unmodified	_RVVKGKVDS_					0	0	0		ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3004455566406	2	494.300916	986.587279	0.79727	0.00039409	-0.70769	-0.00034981	0.089574	4.4277E-05	494.30060653822994	103.34	1.0251	103.46	103.09	104.12	0.12622					57	25	3	0	0	0	0.7932	1	10939	10939		23.042	1.0826	1	689170			52807	10705	35251	35264	59797	59797					0.09344851571484014
RVVKGKVDS	9	Unmodified	_RVVKGKVDS_					0	0	0		ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.30084228515625	2	494.300916	986.587279	1.003	0.00049577	-1.194	-0.00059017	-0.19099	-9.4404E-05	494.3002402240543	96.954	3.9557	97.359	96.674	100.63	0.40498					299	97	6	0	0	0	0.78983	1	11632	11632		27.882	1.0861	1	25258000			52808	10705	35251	35264	59798	59798					0.09344851571484014
RVVKGKVDS	9	Unmodified	_RVVKGKVDS_					0	0	0		ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	ENST00000372564.7_1_9:131770089-131770917:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	494.300916	986.587279	-1.6335	-0.00080746	1.6268	0.00080414	-0.0067103	-3.3169E-06	494.3016072152052	113.32	6.698	113.27	113.24	119.94	-0.044777	0.12559	0.00016641	NaN	29.15	316	158	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3168700			52809	10705	35251	35264							0.09344851571484014
RVVLHPLY	8	Unmodified	_RVVLHPLY_					0	0	0		nc|ENSG00000178297|Q7Z410|TMPRSS9;ENSG00000178297|ENST00000696167|TMPRSS9	nc|ENSG00000178297|Q7Z410|TMPRSS9	nc|ENSG00000178297|Q7Z410|TMPRSS9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.8055419921875	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.86791	1	4346	4346		28.254	0	1	2538600			52810	7198	35252	35265	59799	59799					0.09366360785043071
RVVQKLHPA	9	Unmodified	_RVVQKLHPA_					0	0	0			REV__ENST00000488874.1_1_22:40391391-40393947:+|nuORF	REV__ENST00000488874.1_1_22:40391391-40393947:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.32373046875	2	524.324725	1046.6349	-0.50954	-0.00026717	-2.1471	-0.0011258	-2.6566	-0.0013929	524.3231468149792	30.369	0.88536	30.397	29.92	30.805	0.028618					49	19	3	0	0	0	0.7932	1	1977	1977		25.45	0	1	319940	+		52811	19081	35253	35266	59800	59800					0.11344550562330369
RVVQQYIL	8	Unmodified	_RVVQQYIL_					0	0	0			REV__nc|ENSG00000137474|Q13402-5|MYO7A	REV__nc|ENSG00000137474|Q13402-5|MYO7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.80340576171875	2	509.805834	1017.59712	0.31699	0.0001616	-4.4775	-0.0022826	-4.1605	-0.002121	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.884	1	10148	10148		33.516	1.9858	1	2635100	+		52812	19385	35254	35267	59801	59801					0.08902039576844345
RVVRGKLHQ	9	Unmodified	_RVVRGKLHQ_					0	0	0		ENSG00000187097|ENST00000334696|ENTPD5	ENSG00000187097|ENST00000334696|ENTPD5	ENSG00000187097|ENST00000334696|ENTPD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.84033203125	2	546.841074	1091.66759	0.19665	0.00010754	-2.8678	-0.0015682	-2.6712	-0.0014607	546.8396178219734	100.81	2.7461	101.02	100.32	103.07	0.2058					256	66	6	0	0	0	0.78058	2	10501	10501;10820		30.504	1.3541	1	55511000			52813	7839	35255	35268	59802;59803	59802					0.12542757685173456
RVVRGKLHQ	9	Unmodified	_RVVRGKLHQ_					0	0	0		ENSG00000187097|ENST00000334696|ENTPD5	ENSG00000187097|ENST00000334696|ENTPD5	ENSG00000187097|ENST00000334696|ENTPD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8403930664062	2	546.841074	1091.66759	0.84844	0.00046396	-3.1925	-0.0017458	-2.3441	-0.0012818	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.78058	2	10826	10508;10826		30.504	1.1603	1	43597000			52814	7839	35255	35268	59804;59805	59805					0.12542757685173456
RVVRSAKD	8	Unmodified	_RVVRSAKD_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7777099609375	2	465.777608	929.540663	-1.2002	-0.00055902	1.1319	0.00052724	-0.068228	-3.1779E-05	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.88601	1	7798	7798		34.173	12.213	1	683640			52815	7581	35256	35269	59806	59806					0.07307411740180214
RVVRSTTRHR	10	Unmodified	_RVVRSTTRHR_					0	0	0		ENST00000261435.10_2_4:40058580-40075094:+|nuORF	ENST00000261435.10_2_4:40058580-40075094:+|nuORF	ENST00000261435.10_2_4:40058580-40075094:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3765258789062	2	634.376343	1266.73813	-1.1773	-0.00074688	2.1529	0.0013658	0.97558	0.00061888	634.3774291341157	112.05	1.1748	112.03	111.8	112.98	-0.019882					84	36	4	0	0	0	0.86348	1	11961	11961		31.53	1.2121	1	22589000			52816	9411	35257	35270	59807	59807					0.11543431002814941
RVVTMRGLAS	10	Unmodified	_RVVTMRGLAS_					0	0	0			REV__ENSG00000182771|ENST00000327946|GRID1	REV__ENSG00000182771|ENST00000327946|GRID1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3167114257812	2	545.3135	1088.61245	1.9901	0.0010853	3.8799	0.0021158	5.87	0.003201	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.80179	1	9181	9181		39.253	8.9351	1	4704900	+		52817	22548	35258	35271	59808	59808					0.07168583102384218
RVVVATVAFG	10	Unmodified	_RVVVATVAFG_					0	0	0		ENSG00000160957|ENST00000617875|RECQL4	ENSG00000160957|ENST00000617875|RECQL4	ENSG00000160957|ENST00000617875|RECQL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8040466308594	2	509.805834	1017.59712	0.54005	0.00027532	-4.22	-0.0021514	-3.6799	-0.001876	509.80356957278343	84.302	2.3533	84.749	83.349	85.703	0.44736					134	57	3	0	0	0	0.86718	1	9980	9980		27.882	0	1	950450			52818	5619	35259	35272	59809	59809					0.08902039576844345
RVVYTETLAL	10	Unmodified	_RVVYTETLAL_					0	0	0		ENST00000487527.5_1_17:27916841-27940597:+|nuORF;ENSG00000198720|ENST00000394859|ANKRD13B;nc|ENSG00000198720|Q86YJ7-2|ANKRD13B;ENST00000578943.1_1_17:27935867-27936402:+|nuORF	ENST00000487527.5_1_17:27916841-27940597:+|nuORF	ENST00000487527.5_1_17:27916841-27940597:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.8330688476562	2	582.834788	1163.65502	-1.3452	-0.00078404	-2.3068	-0.0013445	-3.6521	-0.0021286	582.8334573704366	94.259	3.5437	94.457	93.113	96.657	0.19827					191	84	3	0	0	0	0.77314	1	9580	9580		40.778	0	1	775360			52819	8313	35260	35273	59810	59810					0.07974256711645467
RVWAQIEPPL	10	Unmodified	_RVWAQIEPPL_					0	0	0			REV__ENST00000391694.4_1_19:58988585-58991546:+|nuORF	REV__ENST00000391694.4_1_19:58988585-58991546:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8458251953125	2	604.842948	1207.67134	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.958	1	95.901	95.401	96.401	-0.057526								0	0	0	0.45132	1	10273	10273		24.519	2.5593	1		+		52820	26004	35261	35274	59811	59811					0.07581382668377046
RVWDLPGVLK	10	Unmodified	_RVWDLPGVLK_					0	0	0		nc|ENSG00000100162|Q9NSP4-3|CENPM	nc|ENSG00000100162|Q9NSP4-3|CENPM	nc|ENSG00000100162|Q9NSP4-3|CENPM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	591.8531494140625	2	591.853316	1181.69208	-1.1163	-0.00066066	0.52388	0.00031006	-0.59237	-0.0003506	591.8535674862683	60.822	0.56529	61.212	60.859	61.424	0.38945					41	15	3	0	0	0	0.19099	2	6452	6452;6463		88.177	17.361	1	1472700			52821	14809	35262	35275	59812;59813	59812					0.10849973048016182
RVWDLPGVLK	10	Unmodified	_RVWDLPGVLK_					0	0	0		nc|ENSG00000100162|Q9NSP4-3|CENPM	nc|ENSG00000100162|Q9NSP4-3|CENPM	nc|ENSG00000100162|Q9NSP4-3|CENPM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	591.8513793945312	2	591.853316	1181.69208	-0.4624	-0.00027367	-0.26768	-0.00015843	-0.73008	-0.0004321	591.8531037524784	60.656	0.65604	61.209	60.855	61.511	0.55323					47	19	3	0	0	0	0.16557	2	6471	6458;6471		93.143	15.096	1	1852500			52822	14809	35262	35275	59814;59815	59815					0.10849973048016182
RVWERRQRQLW	11	Unmodified	_RVWERRQRQLW_					0	0	0		chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.6387329101562	3	538.302563	1611.88586	3.5626	0.0019178	1.9931	0.0010729	5.5557	0.0029906	538.3036154864011	110.09	1.3352	110.06	109.77	111.11	-0.027641					122	44	4	0	0	0	0.91937	1	12173	12173		1.4188	0.18682	1	461650			52823	275	35263	35276	59816	59816					0.10439322536831241
RVWGGVISA	9	Unmodified	_RVWGGVISA_					0	0	0		chr14:73091357-73096915|23|12.7|0.14|6.49|+|2|TE_info:AluJb,AluJb_dup93368,Alu,SINE,donor,-,73091245,73091357|None,RBM25|1	chr14:73091357-73096915|23|12.7|0.14|6.49|+|2|TE_info:AluJb,AluJb_dup93368,Alu,SINE,donor,-,73091245,73091357|None,RBM25|1	chr14:73091357-73096915|23|12.7|0.14|6.49|+|2|TE_info:AluJb,AluJb_dup93368,Alu,SINE,donor,-,73091245,73091357|None,RBM25|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7670593261719	2	472.769252	943.52395	-0.93003	-0.00043969	-3.4036	-0.0016091	-4.3336	-0.0020488	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.58151	1	8166	8166		47.916	14.4	1	526610			52824	177	35264	35277	59817	59817					0.049929108542414724
RVWKGVLA	8	Unmodified	_RVWKGVLA_					0	0	0		ENST00000430145.3_1_19:49166463-49183997:+|nuORF	ENST00000430145.3_1_19:49166463-49183997:+|nuORF	ENST00000430145.3_1_19:49166463-49183997:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7900085449219	2	464.789987	927.565421	-1.6424	-0.00076336	3.1055	0.0014434	1.4631	0.00068002	464.79130074195194	36.947	2.0594	36.958	35.753	37.812	0.011173					99	45	3	0	0	0	0.85228	1	2361	2361		10.185	0.71421	1	317960			52825	11626	35265	35278	59818	59818					0.09874091613562541
RVWKVRAGPV	10	Unmodified	_RVWKVRAGPV_					0	0	0		ENST00000307741.10_1_19:2813607-2814732:+|nuORF	ENST00000307741.10_1_19:2813607-2814732:+|nuORF	ENST00000307741.10_1_19:2813607-2814732:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	584.3565063476562	2	584.359099	1166.70365	-1.3402	-0.00078317	-3.976	-0.0023234	-5.3162	-0.0031066	584.3568464329793	92.429	3.0691	92.615	91.162	94.231	0.18582					184	72	3	0	0	0	0.86589	1	9245	9245		29.15	5.6269	1	728420			52826	9876	35266	35279	59819	59819					0.1269621486203505
RVWLLQAP	8	Unmodified	_RVWLLQAP_					0	0	0		ENST00000171887.8_1_2:218667769-218668381:-|nuORF	ENST00000171887.8_1_2:218667769-218668381:-|nuORF	ENST00000171887.8_1_2:218667769-218668381:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7955017089844	2	491.795269	981.575986	-0.70573	-0.00034708	1.5523	0.0007634	0.84654	0.00041632	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.81548	1	4287	4287		20.482	1.1219	1	772710			52827	9082	35267	35280	59820	59820					0.08446074267988024
RVWLRWFLWR	10	Unmodified	_RVWLRWFLWR_					0	0	0		ENST00000264649.10_1_17:40610912-40612943:+|nuORF	ENST00000264649.10_1_17:40610912-40612943:+|nuORF	ENST00000264649.10_1_17:40610912-40612943:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.3088073730469	3	506.626207	1516.85679	-1.9937	-0.0010101	3.1186	0.00158	1.1249	0.00056989	506.6272807339118	39.925	0.50712	39.934	39.73	40.237	0.0092812					16	11	2	0	0	0	0.37624	1	2829	2829		16.007	12.795	1	43210			52828	9484	35268	35281	59821	59821					0.11903829978473368
RVWNTLSI	8	Unmodified	_RVWNTLSI_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7803955078125	2	494.782359	987.550165	-0.60063	-0.00029718	-3.4065	-0.0016855	-4.0071	-0.0019826	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.88185	1	8556	8556		32.812	2.3088	1	707910			52829	1487	35269	35282	59822	59822					0.05589180025708629
RVWNTLSI	8	Unmodified	_RVWNTLSI_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7803649902344	2	494.782359	987.550165	-1.5759	-0.00077971	-2.3488	-0.0011622	-3.9247	-0.0019419	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.88185	1	8460	8460		32.812	0.85756	1	569520			52830	1487	35269	35282	59823	59823					0.05589180025708629
RVWQGALRIL	10	Unmodified	_RVWQGALRIL_					0	0	0		ENST00000507279.5_2_5:139943499-139970566:-|nuORF	ENST00000507279.5_2_5:139943499-139970566:-|nuORF	ENST00000507279.5_2_5:139943499-139970566:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	606.3719482421875	2	606.372207	1210.72986	-0.28087	-0.00017031	-4.0857	-0.0024774	-4.3666	-0.0026478	606.369636454931	94.737	2.9757	94.737	93.326	96.302	0					126	69	2	0	0	0	0.86589	1	9326	9326		29.15	2.4566	1	318720			52831	12953	35270	35283	59824	59824					0.13292484033490837
RVYGGLTTK	9	Unmodified	_RVYGGLTTK_					0	0	0		ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.78741455078125	2	497.787641	993.56073	-0.77821	-0.00038738	0.28046	0.00013961	-0.49775	-0.00024777	497.7877730661561	26.959	1.6901	26.784	26.205	27.895	-0.17559					78	37	4	0	0	0	2.4207E-08	4	1522	1498;1522;1534;1546		158.07	42.616	1	5085600			52832	6570	35271	35284	59825;59826;59827;59828	59826					0.06369162680118734
RVYGGLTTK	9	Unmodified	_RVYGGLTTK_					0	0	0		ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.78717041015625	2	497.787641	993.56073	1.6278	0.00081031	-2.1013	-0.001046	-0.47343	-0.00023567	497.7865959491483	26.998	1.538	26.657	26.141	27.679	-0.34035					81	34	5	0	0	0	0.026116	6	1554	1518;1530;1542;1554;1566;1581		120.87	33.114	1	5852300			52833	6570	35271	35284	59829;59830;59831;59832;59833;59834	59832					0.06369162680118734
RVYIGRLSY	9	Unmodified	_RVYIGRLSY_					0	0	0		nc|ENSG00000124193|Q13247-2|SRSF6;nc|ENSG00000124193|Q13247-3|SRSF6;ENSG00000124193|ENST00000244020|SRSF6;ENSG00000116350|ENST00000373795|SRSF4	nc|ENSG00000124193|Q13247-2|SRSF6	nc|ENSG00000124193|Q13247-2|SRSF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.82177734375	2	563.822015	1125.62948	-0.44382	-0.00025024	1.7552	0.00098961	1.3114	0.00073938	563.8228304774768	46.712	0.87974	47.184	46.897	47.776	0.47139					42	20	4	0	0	0	0.18338	4	4427	4393;4404;4415;4427		77.318	20.884	1	5428900			52834	2918	35272	35285	59835;59836;59837;59838	59838					0.07168826979864207
RVYIGRLSY	9	Unmodified	_RVYIGRLSY_					0	0	0		nc|ENSG00000124193|Q13247-2|SRSF6;nc|ENSG00000124193|Q13247-3|SRSF6;ENSG00000124193|ENST00000244020|SRSF6;ENSG00000116350|ENST00000373795|SRSF4	nc|ENSG00000124193|Q13247-2|SRSF6	nc|ENSG00000124193|Q13247-2|SRSF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	563.822509765625	2	563.822015	1125.62948	-0.38665	-0.000218	1.9455	0.0010969	1.5588	0.0008789	563.8228498879856	46.48	0.84751	47.403	47.11	47.958	0.92315					37	19	4	0	0	0	0.33718	3	4387	4387;4399;4412		62.107	18.977	1	4727600			52835	2918	35272	35285	59839;59840;59841	59839					0.07168826979864207
RVYNTDPLKEK	11	Unmodified	_RVYNTDPLKEK_					0	0	0		ENSG00000141580|ENST00000392325|WDR45B;ENST00000574828.1_1_17:80584850-80606216:-|nuORF	ENSG00000141580|ENST00000392325|WDR45B	ENSG00000141580|ENST00000392325|WDR45B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.252197265625	3	454.917381	1361.73031	0.25949	0.00011805	-0.30457	-0.00013855	-0.045081	-2.0508E-05	454.91711299524405	29.981	0.64751	29.892	29.663	30.311	-0.089546					38	14	4	0	0	0	0.5872	1	1955	1955		45.764	5.8912	1	334690			52836	4517	35273	35286	59842	59842					0.06391814172002341
RVYPLVPGG	9	Unmodified	_RVYPLVPGG_					0	0	0			REV__ENSG00000178397|ENST00000313324|FAM220A	REV__ENSG00000178397|ENST00000313324|FAM220A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27783203125	2	479.279452	956.544351	-0.72512	-0.00034753	-3.4808	-0.0016683	-4.2059	-0.0020158	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.76996	1	9390	9390		33.516	4.3455	1	1822400	+		52837	22276	35274	35287	59843	59843					0.06434081514055379
RVYSQRSRI	9	Unmodified	_RVYSQRSRI_					0	0	0		nc|ENSG00000176973|Q8N5H3-4|FAM89B;nc|ENSG00000176973|Q8N5H3-1|FAM89B;ENSG00000176973|ENST00000530349|FAM89B	nc|ENSG00000176973|Q8N5H3-4|FAM89B	nc|ENSG00000176973|Q8N5H3-4|FAM89B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.832275390625	2	582.833446	1163.65234	2.3168	0.0013503	-3.6678	-0.0021377	-1.3511	-0.00078746	582.8313275695042	94.548	3.2085	94.489	93.331	96.54	-0.059212					184	75	3	0	0	0	0.7932	1	10040	10040		26.693	3.1702	1	663000			52838	7108	35275	35288	59844	59844					0.07705846097337599
RVYTAEAASF	10	Unmodified	_RVYTAEAASF_					0	0	0		nc|ENSG00000020181|Q96PE1-2|ADGRA2;ENSG00000020181|ENST00000412232|ADGRA2	nc|ENSG00000020181|Q96PE1-2|ADGRA2	nc|ENSG00000020181|Q96PE1-2|ADGRA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.7761840820312	2	557.780013	1113.54547	-0.27608	-0.00015399	-2.7255	-0.0015202	-3.0016	-0.0016742	557.7781308934807	25.139	0.47025	25.19	24.898	25.368	0.050451					28	16	2	0	0	0	0.8608	1	974	974		34.173	2.5937	1	46823			52839	843	35276	35289	59845	59845					-0.006757489077472201
RVYWSTTDARK	11	Unmodified	_RVYWSTTDARK_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.5770263671875	3	461.577359	1381.71025	-1.4801	-0.0006832	1.499	0.00069193	0.018903	8.7251E-06	461.57796053093995	30.134	0.74916	30.163	29.833	30.582	0.028618					42	16	3	0	0	0	0.48738	1	1954	1954		52.79	14.076	1	352350			52840	3009	35277	35290	59846	59846					0.03466063232053784
RVYWSTTDARK	11	Unmodified	_RVYWSTTDARK_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.5778503417969	3	461.577359	1381.71025	0.013218	6.1012E-06	-0.17205	-7.9414E-05	-0.15883	-7.3313E-05	461.577145427928	30.269	0.56906	30.179	29.917	30.486	-0.089544					32	12	3	0	0	0	0.13682	1	1991	1991		84.188	44.315	1	343740			52841	3009	35277	35290	59847	59847					0.03466063232053784
RWAKKRPIV	9	Unmodified	_RWAKKRPIV_					0	0	0		ENST00000495983.1_1_9:130670673-130672537:-|nuORF;ENSG00000136840|ENST00000335791|ST6GALNAC4	ENST00000495983.1_1_9:130670673-130672537:-|nuORF	ENST00000495983.1_1_9:130670673-130672537:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.3663330078125	2	577.369467	1152.72438	-0.96039	-0.0005545	-4.1495	-0.0023958	-5.1099	-0.0029503	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.7932	1	11075	11075		24.203	1.1603	1	9850700			52842	4142	35278	35291	59848	59848					0.15412805241680871
RWCHVIKPQIR	11	Carbamidomethyl (C)	_RWC(Carbamidomethyl (C))HVIKPQIR_	RWC(1)HVIKPQIR		RWC(41)HVIKPQIR		0	1	0			REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2828674316406	3	498.282112	1491.82451	-0.31448	-0.0001567	1.3908	0.00069302	1.0763	0.00053632	498.2827583965927	32.939	1.0568	33.109	32.764	33.821	0.16971					75	24	5	0	0	0	0.62914	1	2348	2348		41.08	6.9936	1	2943000	+		52843	22893	35279	35292	59849	59849	277				0.09826674513169564
RWEDPDRK	8	Unmodified	_RWEDPDRK_					0	0	0			REV__ENSG00000053501|ENST00000263897|USE1	REV__ENSG00000053501|ENST00000263897|USE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.2730102539062	2	551.275429	1100.53631	0.8757	0.00048275	-0.93134	-0.00051342	-0.055636	-3.0671E-05	551.2747934781779	27.265	1.266	27.237	26.749	28.015	-0.027706					88	32	4	0	0	0	0.92394	1	1272	1272		47.657	3.2801	1	621530	+		52844	16390	35280	35293	59850	59850					-0.00994097473403599
RWERRGRKKR	10	Unmodified	_RWERRGRKKR_					0	0	0			REV__ENST00000486943.1_3_X:49065690-49065852:-|nuORF	REV__ENST00000486943.1_3_X:49065690-49065852:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	476.6249694824219	3	476.623748	1426.84942	2.4039	0.0011458	-3.0186	-0.0014387	-0.61463	-0.00029295	476.6222427481751	107.86	0.2692	107.95	107.74	108.01	0.084457					21	7	4	0	0	0	0.85086	1	13152	13152		19.263	0.73163	1	7288000	+		52845	27562	35281	35294	59851	59851					0.1530649043077119
RWGRRRQWRWP	11	Unmodified	_RWGRRRQWRWP_					0	0	0			REV__ENST00000513117.1_1_5:6633573-6668378:+|nuORF	REV__ENST00000513117.1_1_5:6633573-6668378:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.3132934570312	3	547.302898	1638.88686	3.5008	0.001916	0.96925	0.00053047	4.47	0.0024465	547.303322124528	110.68	1.6744	110.66	109.83	111.51	-0.026314					149	56	4	0	0	0	0.91937	1	12276	12276		1.4188	0.096825	1	371610	+		52846	27988	35282	35295	59852	59852					0.09297581696364432
RWGRRRQWRWP	11	Unmodified	_RWGRRRQWRWP_					0	0	0			REV__ENST00000513117.1_1_5:6633573-6668378:+|nuORF	REV__ENST00000513117.1_1_5:6633573-6668378:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.3132934570312	3	547.302898	1638.88686	3.5008	0.001916	0.96925	0.00053047	4.47	0.0024465	547.303322124528	110.68	1.6744	110.66	109.83	111.51	-0.026314					149	56	4	0	0	0	0.18421	1	12276	12276		1.4188	0.096825	1	371610	+		52847	27988	35282	35295	59853	59853					0.09297581696364432
RWGRRRQWRWP	11	Unmodified	_RWGRRRQWRWP_					0	0	0			REV__ENST00000513117.1_1_5:6633573-6668378:+|nuORF	REV__ENST00000513117.1_1_5:6633573-6668378:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.640380859375	3	547.302898	1638.88686	1.2663	0.00069306	2.9615	0.0016209	4.2279	0.0023139	547.3043895764332	110.6	1.7189	110.63	109.96	111.68	0.031746					144	61	4	0	0	0	0.88916	1	12174	12174		3.4087	0.38274	1	383470	+		52848	27988	35282	35295	59854	59854					0.09297581696364432
RWGVSLPLV	9	Unmodified	_RWGVSLPLV_					0	0	0			REV__ENST00000471811.1_1_3:49211676-49212464:+|nuORF	REV__ENST00000471811.1_1_3:49211676-49212464:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8084106445312	2	513.808377	1025.6022	0.14837	7.6233E-05	1.0682	0.00054883	1.2165	0.00062507	513.8088134492856	48.067	1.4161	48.057	47.714	49.13	-0.0093269					122	36	4	0	0	0	0.77244	1	3919	3919		32.812	0	1	1557500	+		52849	27239	35283	35296	59855	59855					0.0904234343945518
RWHLTLLL	8	Unmodified	_RWHLTLLL_					0	0	0		nc|ENSG00000185189|Q9NSY0-2|NRBP2;ENST00000423469.6_1_8:144917834-144920143:-|nuORF;nc|ENSG00000185189|Q9NSY0-4|NRBP2;ENST00000529747.5_1_8:144917890-144921694:-|nuORF;ENSG00000185189|ENST00000442628|NRBP2	nc|ENSG00000185189|Q9NSY0-2|NRBP2	nc|ENSG00000185189|Q9NSY0-2|NRBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3253784179688	2	526.324194	1050.63383	-0.040391	-2.1259E-05	0.79585	0.00041887	0.75546	0.00039762	526.3245043289719	60.299	0.95338	60.285	60.112	61.065	-0.013733					38	27	2	0	0	0	0.80706	1	5582	5582		19.36	1.995	1	79930			52850	7686	35284	35297	59856	59856					0.110543361934333
RWHRKRRKLL	10	Unmodified	_RWHRKRRKLL_					0	0	0		ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.6465148925781	3	483.644372	1447.91129	0.31415	0.00015194	3.9794	0.0019246	4.2935	0.0020765	483.64616192950325	48.329	2.4983	48.367	47.592	50.09	0.037735					188	68	4	0	0	0	0.88463	1	3669	3669		11.636	5.315	1	2026900			52851	11399	35285	35298	59857	59857					0.2052484184991954
RWHRKRRKLL	10	Unmodified	_RWHRKRRKLL_					0	0	0		ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.6462707519531	3	483.644372	1447.91129	-0.19648	-9.5025E-05	4.3651	0.0021112	4.1686	0.0020161	483.6463549494067	46.472	1.6155	46.393	45.933	47.548	-0.079002					182	48	5	0	0	0	0.888	1	3417	3417		11.097	2.6895	1	4742900			52852	11399	35285	35298	59858	59858					0.2052484184991954
RWHVRIWGKKR	11	Unmodified	_RWHVRIWGKKR_					0	0	0			REV__ENST00000388822.9_1_4:119606595-119606697:+|nuORF	REV__ENST00000388822.9_1_4:119606595-119606697:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.968994140625	3	507.972378	1520.8953	-1.8784	-0.00095415	-3.7082	-0.0018837	-5.5866	-0.0028378	507.97041059348106	16.709	0.31564	16.709	16.597	16.912	0					30	13	3	0	0	0	0.8398	1	153	153		6.6596	0.33873	1	128930	+		52853	25989	35286	35299	59859	59859					0.1556913561298643
RWKDIRARIFL	11	Unmodified	_RWKDIRARIFL_					0	0	0		ENST00000469159.1_1_1:160326803-160328058:+|nuORF;nc|ENSG00000162736|Q92542-2|NCSTN;ENSG00000162736|ENST00000294785|NCSTN	ENST00000469159.1_1_1:160326803-160328058:+|nuORF	ENST00000469159.1_1_1:160326803-160328058:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.3005065917969	3	491.964889	1472.87284	2.8449	0.0013996	3.1142	0.0015321	5.9591	0.0029317	491.96646717370976	118.16	0.67554	118.13	117.92	118.6	-0.024208					35	22	2	0	0	0	0.17955	1	13078	13078		12.957	9.5488	1	53347			52854	5728	35287	35300	59860	59860					0.1553149142471284
RWKFIKRWKTR	11	Unmodified	_RWKFIKRWKTR_					0	0	0		nc|ENSG00000197415|Q14D04-2|VEPH1;ENSG00000197415|ENST00000362010|VEPH1	nc|ENSG00000197415|Q14D04-2|VEPH1	nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.3255004882812	3	535.6598	1603.95757	0.028052	1.5026E-05	0.40678	0.00021789	0.43483	0.00023292	535.659900542984	111.64	0.32854	111.76	111.48	111.81	0.11118					11	8	2	0	0	0	0.18413	1	12032	12032		3.026	0.17417	1	1461800			52855	8163	35288	35301	59861	59861					0.17974861961329225
RWKFSFLLL	9	Unmodified	_RWKFSFLLL_					0	0	0		ENST00000424404.1_1_7:121947107-121947290:+|nuORF	ENST00000424404.1_1_7:121947107-121947290:+|nuORF	ENST00000424404.1_1_7:121947107-121947290:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.90966796875	3	403.90961	1208.707	1.4026	0.00056654	0.28262	0.00011415	1.6853	0.00068069	403.9097044639606	65.998	1.3411	66.384	65.959	67.3	0.38582					64	35	2	0	0	0	0.7932	1	7203	7203		25.574	1.3422	1	273570			52856	11513	35289	35302	59862	59862					0.11099464916037505
RWKRHIVRQLR	11	Unmodified	_RWKRHIVRQLR_					0	0	0		ENST00000537143.5_1_11:72525490-72533952:+|nuORF;nc|ENSG00000168010|Q8NAA4-3|ATG16L2;ENST00000439504.6_1_11:72525490-72534007:+|nuORF;ENSG00000168010|ENST00000321297|ATG16L2	ENST00000537143.5_1_11:72525490-72533952:+|nuORF	ENST00000537143.5_1_11:72525490-72533952:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2567138671875	3	516.655048	1546.94332	-0.22048	-0.00011391	0.25062	0.00012948	0.030141	1.5572E-05	516.9903003926869	69.153	0.12491	69.7	69.619	69.744	0.54693					4	2	2	0	0	0	0.18258	1	7659	7659		12.957	12.617	1	85786			52857	6355	35290	35303	59863	59863					0.19172209533076057
RWLLLYYALCF	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RWLLLYYALCF_					1	0	0		nc|ENSG00000127241|P48740-3|MASP1;nc|ENSG00000127241|P48740|MASP1;ENSG00000127241|ENST00000296280|MASP1	nc|ENSG00000127241|P48740-3|MASP1	nc|ENSG00000127241|P48740-3|MASP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.5986328125	3	501.600336	1501.77918	0.45466	0.00022806	-4.0726	-0.0020428	-3.6179	-0.0018148	501.59830819479515	63.888	0.97901	64.443	64.003	64.982	0.55449					70	22	4	0	0	0	0.60687	1	6888	6888		43.651	20.273	1	672720			52858	3487	35291	35304	59864	59864					0.048360112074306016
RWLLLYYALCF	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))RWLLLYYALCF_					1	0	0		nc|ENSG00000127241|P48740-3|MASP1;nc|ENSG00000127241|P48740|MASP1;ENSG00000127241|ENST00000296280|MASP1	nc|ENSG00000127241|P48740-3|MASP1	nc|ENSG00000127241|P48740-3|MASP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	501.600336	1501.77918	-0.86848	-0.00043563	-2.6642	-0.0013364	-3.5327	-0.001772	501.59904303520557	63.966	1.0739	64.352	63.876	64.95	0.38681	-0.045179	0.00089471	NaN	43.651	69	24	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	707510			52859	3487	35291	35304							0.048360112074306016
RWLPRRRRRRR	11	Unmodified	_RWLPRRRRRRR_					0	0	0			REV__ENSG00000171873|ENST00000379453|ADRA1D	REV__ENSG00000171873|ENST00000379453|ADRA1D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.924560546875	4	416.766175	1663.03559	-0.16282	-6.7856E-05	3.3364	0.0013905	3.1736	0.0013226	416.7673987338602	28.621	1.6113	28.59	28.078	29.689	-0.030531					97	37	4	0	0	0	0.18331	1	1748	1748		3.026	2.7137	1	277780	+		52860	21782	35292	35305	59865	59865					0.2305973238990191
RWLPRRRRRRR	11	Unmodified	_RWLPRRRRRRR_					0	0	0			REV__ENSG00000171873|ENST00000379453|ADRA1D	REV__ENSG00000171873|ENST00000379453|ADRA1D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.9244079589844	4	416.766175	1663.03559	0.79353	0.00033072	2.3933	0.00099743	3.1868	0.0013281	416.76704103552254	28.958	1.6457	28.784	28.02	29.665	-0.17336					104	39	4	0	0	0	0.18331	1	1752	1752		3.026	2.6855	1	385340	+		52861	21782	35292	35305	59866	59866					0.2305973238990191
RWLQQEQN	8	Unmodified	_RWLQQEQN_					0	0	0		ENSG00000169660|ENST00000327949|HEXD;nc|ENSG00000169660|Q8WVB3-2|HEXD	ENSG00000169660|ENST00000327949|HEXD	ENSG00000169660|ENST00000327949|HEXD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.2755126953125	2	551.275429	1100.53631	0.32503	0.00017918	-0.37436	-0.00020638	-0.04933	-2.7194E-05	551.2751109394707	27.083	1.2037	27.045	26.676	27.88	-0.038523					78	29	4	0	0	0	0.87922	1	1246	1246		31.955	0.32059	1	656180			52862	6514	35293	35306	59867	59867					-0.009940974733808616
RWLQRQRREWV	11	Unmodified	_RWLQRQRREWV_					0	0	0			REV__chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	REV__chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3052978515625	3	538.302563	1611.88586	3.5626	0.0019178	1.9931	0.0010729	5.5557	0.0029906	538.3036154864011	110.09	1.3352	110.06	109.77	111.11	-0.027641					122	44	4	0	0	0	0.88916	2	12232	12232;12259		3.4087	0	1	461650	+		52863	15700	35294	35307	59868;59869	59868					0.10439322536785767
RWLQRQRREWV	11	Unmodified	_RWLQRQRREWV_					0	0	0			REV__chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	REV__chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.305908203125	3	538.302563	1611.88586	1.2455	0.00067047	4.1546	0.0022364	5.4002	0.0029069	538.3047341501328	109.96	1.3308	109.99	109.73	111.06	0.033096					84	48	2	0	0	0	0.84494	1	12073	12073		6.3209	0.31984	1	535530	+		52864	15700	35294	35307	59870	59870					0.10439322536785767
RWLRKPPL	8	Unmodified	_RWLRKPPL_					0	0	0			REV__ENST00000261783.3_1_14:68086627-68108954:+|nuORF	REV__ENST00000261783.3_1_14:68086627-68108954:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.33984375	2	533.337636	1064.66072	1.2441	0.00066355	3.5538	0.0018954	4.7979	0.0025589	533.3394000177375	99.114	2.7086	99.162	98.677	101.39	0.047531					171	63	4	0	0	0	0.81548	1	10595	10595		20.482	1.1219	1	3009900	+		52865	24404	35295	35308	59871	59871					0.1309744480458903
RWLWRRRPWLL	11	Unmodified	_RWLWRRRPWLL_					0	0	0		chr12:54282932-54283079|63|29.79|0.0|21.51|+|1|HNRNPA1,HNRNPA1|2	chr12:54282932-54283079|63|29.79|0.0|21.51|+|1|HNRNPA1,HNRNPA1|2	chr12:54282932-54283079|63|29.79|0.0|21.51|+|1|HNRNPA1,HNRNPA1|2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	409.2918701171875	4	410.246752	1636.9579	-1.9389	-0.00079544	-2.7937	-0.0011461	-4.7326	-0.0019415	410.24554135757336	18.576	1.0507	18.62	18.203	19.253	0.044048					123	49	4	0	0	0	0.18372	1	401	401		3.4087	1.99	1	197090			52866	133	35296	35309	59872	59872					0.16490281681217311
RWPHHQHRLWI	11	Unmodified	_RWPHHQHRLWI_					0	0	0			REV__chr4:87659252-87659431|25|37.0|0.01|11.59|+|1|DMP1,DMP1|1	REV__chr4:87659252-87659431|25|37.0|0.01|11.59|+|1|DMP1,DMP1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	522.6142578125	3	522.616482	1564.82762	-0.35441	-0.00018522	-0.53991	-0.00028217	-0.89432	-0.00046739	522.6161280013287	54.652	0.42457	54.603	54.291	54.716	-0.049271					23	13	2	0	0	0	0.78683	1	4538	4538		14.086	0.57807	1	127720	+		52867	15842	35297	35310	59873	59873					0.06779685682204217
RWPKTRPKRE	10	Unmodified	_RWPKTRPKRE_					0	0	0			REV__ENST00000472046.1_1_3:63991581-63991704:+|nuORF	REV__ENST00000472046.1_1_3:63991581-63991704:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9322814941406	3	451.933588	1352.77894	-1.2127	-0.00054806	-0.85054	-0.00038439	-2.0632	-0.00093245	451.93312779328147	98.801	2.4221	99.023	97.442	99.864	0.22263					151	56	5	0	0	0	0.86014	1	10153	10153		23.378	2.3457	1	518100	+		52868	27252	35298	35311	59874	59874					0.11665772322453449
RWRANKRKELH	11	Unmodified	_RWRANKRKELH_					0	0	0		ENST00000374379.8_1_1:25169437-25169536:+|nuORF	ENST00000374379.8_1_1:25169437-25169536:+|nuORF	ENST00000374379.8_1_1:25169437-25169536:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.6238708496094	3	498.623525	1492.84875	-0.6857	-0.00034191	-0.33964	-0.00016935	-1.0253	-0.00051126	498.62329502123123	21.623	1.0354	21.565	21.112	22.147	-0.057203					74	42	2	0	0	0	0.76892	1	626	626		17.833	3.7471	1	54712			52869	10778	35299	35312	59875	59875					0.12203650991091308
RWRHLLRRL	9	Unmodified	_RWRHLLRRL_					0	0	0		ENST00000342232.4_1_8:75233190-75233559:-|nuORF	ENST00000342232.4_1_8:75233190-75233559:-|nuORF	ENST00000342232.4_1_8:75233190-75233559:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.25360107421875	3	435.942418	1304.80543	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.072	1	23.16	22.66	23.66	0.088013								0	0	0	0.35196	1	727	727		14.137	0.051111	1				52870	10256	35300	35313	59876	59876					0.1652150600443747
RWRKLFWRLKM	11	Unmodified	_RWRKLFWRLKM_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.65625	3	540.653769	1618.93948	3.6261	0.0019605	2.4241	0.0013106	6.0502	0.0032711	540.6548353927262	106.96	1.3635	106.92	106.4	107.77	-0.034134					76	28	4	0	0	0	0.92084	1	11849	11849		1.3219	0.98142	1	647440	+		52871	20187	35301	35314	59877	59877					0.15476403714978915
RWRKLFWRLKM	11	Unmodified	_RWRKLFWRLKM_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.656494140625	3	540.653769	1618.93948	3.5708	0.0019305	2.3761	0.0012847	5.9469	0.0032152	540.6545893814242	105.47	0.95851	105.66	105.29	106.25	0.18648					38	20	3	0	0	0	0.88916	1	12893	12893		3.4087	0	1	257030	+		52872	20187	35301	35314	59878	59878					0.15476403714978915
RWRKRWRRWRW	11	Unmodified	_RWRKRWRRWRW_					0	0	0		ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.791748046875	4	457.764638	1827.02945	-1.2143	-0.00055585	1.9741	0.00090367	0.75983	0.00034782	457.7653728218593	50.619	0.88669	50.649	50.073	50.959	0.029629					69	27	4	0	0	0	0.18421	1	3914	3914		1.4188	0.096825	1	179020			52873	9410	35302	35315	59879	59879					0.14901214158408038
RWRKRWRRWRW	11	Unmodified	_RWRKRWRRWRW_					0	0	0		ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7921447753906	4	457.764638	1827.02945	0.30908	0.00014149	0.0049828	2.281E-06	0.31407	0.00014377	458.0153122394258	50.55	0.90842	50.599	50.146	51.054	0.049896					62	30	3	0	0	0	0.18408	1	3926	3926		3.4087	0.38274	1	180110			52874	9410	35302	35315	59880	59880					0.14901214158408038
RWRKRWRRWRW	11	Unmodified	_RWRKRWRRWRW_					0	0	0		ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	610.811767578125	3	610.017092	1827.02945	0.5389	0.00032874	-0.016678	-1.0174E-05	0.52222	0.00031857	610.0170799905419	51.292	0.66665	51.728	51.409	52.075	0.43505					35	15	3	0	0	0	0.18425	1	5131	5131		0.37141	0.37141	1	430430			52875	9410	35302	35315	59881	59881					0.14901214158408038
RWRKRWRRWRW	11	Unmodified	_RWRKRWRRWRW_					0	0	0		ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		4	457.764638	1827.02945	-0.42432	-0.00019424	0.61035	0.0002794	0.18603	8.516E-05	457.76498199507313	50.645	0.69425	50.553	50.184	50.878	-0.091797	-0.047543	-0.00037669	NaN	3.4087	50	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	232760			52876	9410	35302	35315							0.14901214158408038
RWRKRWRRWRW	11	Unmodified	_RWRKRWRRWRW_					0	0	0		ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	610.017092	1827.02945	1.1208	0.00068373	-1.0263	-0.00062606	0.09453	5.7665E-05	610.3506046018772	51.046	0.57407	51.798	51.532	52.106	0.75174	0.035029	-0.0010929	NaN	1.4188	33	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	728230			52877	9410	35302	35315							0.14901214158408038
RWRKRWRWRR	10	Unmodified	_RWRKRWRWRR_					0	0	0		ENST00000507209.5_1_4:187125362-187125452:+|nuORF	ENST00000507209.5_1_4:187125362-187125452:+|nuORF	ENST00000507209.5_1_4:187125362-187125452:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.3742065429688	3	547.990654	1640.95013	0.09618	5.2706E-05	-0.015987	-8.7608E-06	0.080193	4.3945E-05	548.3239248140651	37.62	0.40032	37.637	37.511	37.912	0.016563					15	12	2	0	0	0	0.37624	1	2158	2158		3.6191	0	1	101500			52878	12952	35303	35316	59882	59882					0.15529567204271189
RWRLWRRLQKT	11	Unmodified	_RWRLWRRLQKT_					0	0	0		ENST00000411552.5_1_7:30498788-30515497:-|nuORF;ENST00000419799.5_1_7:30498788-30503297:-|nuORF	ENST00000411552.5_1_7:30498788-30515497:-|nuORF	ENST00000411552.5_1_7:30498788-30515497:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.6530151367188	3	533.654937	1597.94298	0.10654	5.6855E-05	-3.7973	-0.0020265	-3.6908	-0.0019696	533.652850170674	17.154	0.31915	16.543	16.386	16.706	-0.6107					18	6	3	0	0	0	0.85439	1	228	228		5.6988	2.4875	1	288950			52879	11327	35304	35317	59883	59883					0.16792789813189302
RWRPRCTLKKK	11	Unmodified	_RWRPRCTLKKK_					0	0	0		ENST00000508743.1_1_17:46969858-46986323:-|nuORF	ENST00000508743.1_1_17:46969858-46986323:-|nuORF	ENST00000508743.1_1_17:46969858-46986323:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2998046875	3	491.297873	1470.87179	2.8436	0.001397	-0.34153	-0.00016779	2.502	0.0012292	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.81407	1	12648	12648		8.4073	1.7476	1	3274400			52880	12979	35305	35318	59884	59884					0.1551895378415793
RWRRIRPLRIG	11	Unmodified	_RWRRIRPLRIG_					0	0	0			REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.6494140625	3	493.647894	1477.92185	0.24426	0.00012058	3.1224	0.0015414	3.3667	0.001662	493.6494164548298	44.568	2.4513	44.545	43.895	46.346	-0.023079					82	57	2	0	0	0	0.85439	1	3462	3462		5.6988	2.0797	1	516410	+		52881	30021	35306	35319	59885	59885					0.20200824504354387
RWRRIRPLRIG	11	Unmodified	_RWRRIRPLRIG_					0	0	0			REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.6487121582031	3	493.647894	1477.92185	-0.87644	-0.00043265	4.4526	0.002198	3.5762	0.0017654	493.64998188310005	44.669	3.6346	44.636	43.623	47.257	-0.033474					240	86	4	0	0	0	0.81021	1	3606	3606		9.2118	2.8909	1	495450	+		52882	30021	35306	35319	59886	59886					0.20200824504354387
RWRRIRPLRIG	11	Unmodified	_RWRRIRPLRIG_					0	0	0			REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.64990234375	3	493.647894	1477.92185	-0.69439	-0.00034278	4.3171	0.0021311	3.6227	0.0017883	493.64986615428916	44.451	1.6231	44.46	43.725	45.348	0.0084534					108	38	3	0	0	0	0.80593	3	3142	3110;3132;3142		10.104	0.84683	1	353910	+		52883	30021	35306	35319	59887;59888;59889	59889					0.20200824504354387
RWRRIRPLRIG	11	Unmodified	_RWRRIRPLRIG_					0	0	0			REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.6500549316406	3	493.647894	1477.92185	0.28936	0.00014284	3.2941	0.0016261	3.5835	0.001769	493.6493656295497	44.418	1.6555	44.467	43.631	45.286	0.048996					106	39	4	0	0	0	0.80813	1	3141	3141		9.6461	3.3253	1	509790	+		52884	30021	35306	35319	59890	59890					0.20200824504354387
RWRRIRPLRIG	11	Unmodified	_RWRRIRPLRIG_					0	0	0			REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.64947509765625	3	493.647894	1477.92185	-0.090194	-4.4524E-05	3.7222	0.0018375	3.632	0.0017929	493.64966914482096	44.463	1.6429	44.405	43.685	45.328	-0.058258					115	39	4	0	0	0	0.7896	2	3126	3085;3126		13.508	2.8909	1	603320	+		52885	30021	35306	35319	59891;59892	59892					0.20200824504354387
RWRRIRPLRIG	11	Unmodified	_RWRRIRPLRIG_					0	0	0			REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	REV__nc|ENSG00000169955|Q9BV97-2|ZNF747	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.64971923828125	3	493.647894	1477.92185	-0.13988	-6.9052E-05	4.0395	0.0019941	3.8996	0.001925	493.64993788378774	45.757	1.7209	45.688	45.192	46.913	-0.068634					91	46	3	0	0	0	0.81021	1	3338	3338		9.2118	3.513	1	212310	+		52886	30021	35306	35319	59893	59893					0.20200824504354387
RWRRRLPLLLV	11	Unmodified	_RWRRRLPLLLV_					0	0	0			REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.65618896484375	3	493.324528	1476.95176	-1.6394	-0.00080874	-4.3415	-0.0021418	-5.9809	-0.0029505	493.32236497558085	42.165	1.1115	42.165	41.85	42.961	0					41	27	2	0	0	0	0.80593	1	2925	2925		10.104	3.783	1	115990	+		52887	26459	35307	35320	59894	59894					0.23235763449679325
RWRRRLPLLLV	11	Unmodified	_RWRRRLPLLLV_					0	0	0			REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	493.324528	1476.95176	0.32533	0.00016049	-6.7845	-0.003347	-6.4592	-0.0031865	493.3210680737603	42.529	0.84713	42.5	42.119	42.966	-0.029465	0.28543	-0.0021545	NaN	10.104	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79264	+		52888	26459	35307	35320							0.23235763449679325
RWRRRLPLLLV	11	Unmodified	_RWRRRLPLLLV_					0	0	0			REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	493.324528	1476.95176	-1.0686	-0.00052717	-5.5781	-0.0027518	-6.6467	-0.003279	493.3216503715979	42.404	0.65049	42.366	42.061	42.711	-0.038223	0.15143	-0.00036908	NaN	10.104	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61181	+		52889	26459	35307	35320							0.23235763449679325
RWRRRLPLLLV	11	Unmodified	_RWRRRLPLLLV_					0	0	0			REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	493.324528	1476.95176	-2.4473	-0.0012073	-3.9601	-0.0019536	-6.4074	-0.0031609	493.6570797872038	42.364	0.73701	42.368	42.16	42.897	0.003418	0.15362	0.0020255	NaN	10.104	23	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60571	+		52890	26459	35307	35320							0.23235763449679325
RWRRRLPLLLV	11	Unmodified	_RWRRRLPLLLV_					0	0	0			REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	493.324528	1476.95176	-0.70469	-0.00034764	-5.0187	-0.0024758	-5.7233	-0.0028235	493.32198318407274	42.221	0.77557	42.226	41.908	42.683	0.0043983	0.011612	0.00045893	NaN	10.104	32	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112750	+		52891	26459	35307	35320							0.23235763449679325
RWRRRLPLLLV	11	Unmodified	_RWRRRLPLLLV_					0	0	0			REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	493.324528	1476.95176	0.26704	0.00013174	-5.7963	-0.0028595	-5.5293	-0.0027277	493.6562117573543	41.887	0.65631	41.961	41.79	42.446	0.073418	-0.2535	-0.00069195	NaN	10.104	31	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102740	+		52892	26459	35307	35320							0.23235763449679325
RWRRRLPLLLV	11	Unmodified	_RWRRRLPLLLV_					0	0	0			REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	REV__ENST00000418337.6_2_7:151292537-151329253:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	493.324528	1476.95176	-0.0043231	-2.1327E-06	-6.2204	-0.0030687	-6.2247	-0.0030708	493.32154161855993	41.96	0.64386	41.914	41.71	42.354	-0.045471	-0.29973	-0.0013197	NaN	10.104	30	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140020	+		52893	26459	35307	35320							0.23235763449679325
RWRRWRKRWR	10	Unmodified	_RWRRWRKRWR_					0	0	0			REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.3291015625	3	547.990654	1640.95013	0.071998	3.9454E-05	1.3226	0.00072476	1.3946	0.00076422	548.3256358959298	24.707	1.4523	24.765	24.378	25.83	0.058167					97	68	2	0	0	0	0.93363	1	910	910		4.0829	1.0569	1	140930	+		52894	24388	35308	35321	59895	59895					0.15529567204271189
RWRRWRKRWR	10	Unmodified	_RWRRWRKRWR_					0	0	0			REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	547.990654	1640.95013	0.071998	3.9454E-05	1.3226	0.00072476	1.3946	0.00076422	548.3256358959298	24.707	1.4523	24.765	24.378	25.83	0.058167	-0.078987	0.00026847	NaN	4.0829	97	68	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140930	+		52895	24388	35308	35321							0.15529567204271189
RWRRWRKRWR	10	Unmodified	_RWRRWRKRWR_					0	0	0			REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	547.990654	1640.95013	0.16197	8.876E-05	1.4116	0.00077357	1.5736	0.00086233	547.9914662121348	24.6	0.8069	24.701	24.198	25.005	0.10045	-0.14325	0.00041488	NaN	4.0829	66	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171790	+		52896	24388	35308	35321							0.15529567204271189
RWRRWRKRWR	10	Unmodified	_RWRRWRKRWR_					0	0	0			REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	547.990654	1640.95013	0.77995	0.0004274	0.86226	0.00047251	1.6422	0.00089991	547.9911379629576	24.946	1.107	24.96	24.645	25.752	0.013996	0.1161	-0.00048828	NaN	4.0829	84	55	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	294200	+		52897	24388	35308	35321							0.15529567204271189
RWRRWRKRWR	10	Unmodified	_RWRRWRKRWR_					0	0	0			REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	547.990654	1640.95013	-0.27431	-0.00015032	1.849	0.0010132	1.5747	0.00086291	548.3252947557618	25.14	1.1238	24.812	23.98	25.104	-0.32825	-0.031768	0.0011339	NaN	4.0829	35	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65907	+		52898	24388	35308	35321							0.15529567204271189
RWRRWRKRWR	10	Unmodified	_RWRRWRKRWR_					0	0	0			REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	547.990654	1640.95013	2.3278	0.0012756	0.40325	0.00022098	2.731	0.0014966	548.3244816688978	25.413	1.3361	24.982	24.318	25.654	-0.4311	0.13791	-0.0012429	NaN	4.0829	55	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87968	+		52899	24388	35308	35321							0.15529567204271189
RWRWRKRWRLT	11	Unmodified	_RWRWRKRWRLT_					0	0	0			REV__ENST00000507209.5_1_4:187125362-187125452:+|nuORF	REV__ENST00000507209.5_1_4:187125362-187125452:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2575988769531	4	425.752468	1698.98076	0.81777	0.00034817	4.4769	0.0019061	5.2947	0.0022542	425.7539946547297	34.489	0.97067	34.699	34.234	35.204	0.21003					32	23	2	0	0	0	0.18421	1	2564	2564		0.3405	0.3405	1	148400	+		52900	27901	35309	35322	59896	59896					0.15923300798658602
RWRWRKRWRLT	11	Unmodified	_RWRWRKRWRLT_					0	0	0			REV__ENST00000507209.5_1_4:187125362-187125452:+|nuORF	REV__ENST00000507209.5_1_4:187125362-187125452:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.585693359375	4	425.752468	1698.98076	0.41733	0.00017768	0.99557	0.00042387	1.4129	0.00060155	425.75292698009724	17.868	0.48396	17.247	17.101	17.585	-0.62141					18	11	2	0	0	0	0.18331	1	318	318		5.6988	5.3274	1	50786	+		52901	27901	35309	35322	59897	59897					0.15923300798658602
RWRWRKRWRLT	11	Unmodified	_RWRWRKRWRLT_					0	0	0			REV__ENST00000507209.5_1_4:187125362-187125452:+|nuORF	REV__ENST00000507209.5_1_4:187125362-187125452:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		4	425.752468	1698.98076	1.4096	0.00060015	5.1257	0.0021823	6.5353	0.0027824	425.7546714187126	34.629	0.92655	35.01	34.4	35.326	0.3812	0.15536	0.0003773	NaN	0.3405	28	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	145840	+		52902	27901	35309	35322							0.15923300798658602
RWRWRWSRMLR	11	Unmodified	_RWRWRWSRMLR_					0	0	0			REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.6463623046875	3	563.644155	1687.91064	-0.093845	-5.2895E-05	3.1831	0.0017941	3.0892	0.0017412	563.980540198044	56.091	0.50204	56.064	55.659	56.161	-0.027279					30	15	3	0	0	0	0.92084	1	5130	5130		1.3219	0.98142	1	327720	+		52903	26405	35310	35323	59898	59898					0.09419679138545689
RWSLVLSP	8	Unmodified	_RWSLVLSP_					0	0	0		ENSG00000089063|ENST00000342308|TMEM230	ENSG00000089063|ENST00000342308|TMEM230	ENSG00000089063|ENST00000342308|TMEM230	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2779541015625	2	479.279452	956.544351	-1.1288	-0.000541	-3.1146	-0.0014928	-4.2434	-0.0020338	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.87922	1	7511	7511		31.955	1.6371	1	1311100			52904	1606	35311	35324	59899	59899					0.0643408151404401
RWSLVLSP	8	Unmodified	_RWSLVLSP_					0	0	0		ENSG00000089063|ENST00000342308|TMEM230	ENSG00000089063|ENST00000342308|TMEM230	ENSG00000089063|ENST00000342308|TMEM230	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774353027344	2	479.279452	956.544351	-1.4767	-0.00070776	-2.9072	-0.0013934	-4.3839	-0.0021011	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.89494	1	7967	7967		37.159	2.9866	1	1785900			52905	1606	35311	35324	59900	59900					0.0643408151404401
RWSSSRVSAPI	11	Unmodified	_RWSSSRVSAPI_					0	0	0			REV__ENST00000218516.3_1_X:100658806-100662812:-|nuORF	REV__ENST00000218516.3_1_X:100658806-100662812:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.0049438476562	2	623.338561	1244.66257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.855	1	66.241	65.741	66.741	0.38581								0	0	0	0.56276	1	7164	7164		32.751	2.4328	1		+		52906	24143	35312	35325	59901	59901					0.05002409031908428
RWTLGKLT	8	Unmodified	_RWTLGKLT_					0	0	0			REV__nc|ENSG00000182183|Q6UWV7-2|SHISAL2A	REV__nc|ENSG00000182183|Q6UWV7-2|SHISAL2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.79095458984375	2	487.792727	973.5709	-1.4525	-0.00070854	-3.1625	-0.0015427	-4.6151	-0.0022512	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.87479	1	7938	7938		30.504	1.3541	1	503530	+		52907	26739	35313	35326	59902	59902					0.08305770405377189
RWVHFKKLQ	9	Unmodified	_RWVHFKKLQ_					0	0	0			REV__ENST00000523988.5_1_13:45969527-45969839:-|nuORF	REV__ENST00000523988.5_1_13:45969527-45969839:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.230224609375	3	414.580375	1240.7193	2.5839	0.0010712	1.2809	0.00053104	3.8648	0.0016023	414.9149992062092	25.914	0.21276	25.483	25.312	25.525	-0.4311					6	4	2	0	0	0	0.20789	1	1365	1365		36.447	12.215	1	20578	+		52908	28150	35314	35327	59903	59903					0.10856501379089423
RWWAQLKIVSK	11	Unmodified	_RWWAQLKIVSK_					0	0	0			REV__ENST00000478903.5_1_3:197616453-197639632:-|nuORF	REV__ENST00000478903.5_1_3:197616453-197639632:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2866516113281	3	472.282106	1413.82449	-0.90644	-0.0004281	2.7265	0.0012877	1.82	0.00085957	472.2829852906886	101.65	1.9803	101.85	100.8	102.78	0.2058					96	48	4	0	0	0	0.17996	1	10750	10750		12.433	0	1	449410	+		52909	18049	35315	35328	59904	59904					0.13412997784803338
RWWFRPHKTFA	11	Unmodified	_RWWFRPHKTFA_					0	0	0			REV__ENST00000325888.12_1_7:128497387-128498124:+|nuORF	REV__ENST00000325888.12_1_7:128497387-128498124:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.275390625	3	511.273834	1530.79967	1.3628	0.00069676	1.2724	0.00065053	2.6352	0.0013473	511.27443320480126	37.027	0.70287	37.513	37.283	37.986	0.48581					49	16	4	0	0	0	0.77205	1	2979	2979		17.167	3.0807	1	1640500	+		52910	25067	35316	35329	59905	59905					0.055503627020925705
RWWFRRLFLIF	11	Unmodified	_RWWFRRLFLIF_					0	0	0		ENST00000281830.3_1_2:223918801-223918864:+|nuORF	ENST00000281830.3_1_2:223918801-223918864:+|nuORF	ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3142700195312	3	547.317262	1638.92996	0.182	9.9611E-05	-3.4384	-0.0018819	-3.2564	-0.0017823	547.315343228547	16.5	0.27463	15.901	15.786	16.06	-0.59873					9	5	2	0	0	0	0.80593	1	145	145		10.104	6.4848	1	85700			52911	9629	35317	35330	59906	59906					0.13604958701102987
RWWFRRLFLIF	11	Unmodified	_RWWFRRLFLIF_					0	0	0		ENST00000281830.3_1_2:223918801-223918864:+|nuORF	ENST00000281830.3_1_2:223918801-223918864:+|nuORF	ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	547.317262	1638.92996	0.92449	0.00050599	-5.54	-0.0030321	-4.6155	-0.0025261	547.6486609094303	16.216	0.10774	16.191	16.14	16.248	-0.024035	0.14807	-0.0027908	NaN	10.104	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27928			52912	9629	35317	35330							0.13604958701102987
RWWFRRLFLIF	11	Unmodified	_RWWFRRLFLIF_					0	0	0		ENST00000281830.3_1_2:223918801-223918864:+|nuORF	ENST00000281830.3_1_2:223918801-223918864:+|nuORF	ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	547.317262	1638.92996	-0.17261	-9.4474E-05	-4.1796	-0.0022876	-4.3523	-0.0023821	547.6498095464102	16.525	0.27617	16.038	15.821	16.098	-0.48718	-0.0055053	-0.00055714	NaN	10.104	9	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40379			52913	9629	35317	35330							0.13604958701102987
RWWHRRYEDVE	11	Unmodified	_RWWHRRYEDVE_					0	0	0			REV__nc|ENSG00000010072|Q9H040-3|SPRTN	REV__nc|ENSG00000010072|Q9H040-3|SPRTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.9317016601562	3	544.599046	1630.77531	-0.16088	-8.7613E-05	-2.372	-0.0012918	-2.5328	-0.0013794	544.597658970736	19.993	1.36	19.364	18.801	20.161	-0.62961					69	29	5	0	0	0	0.81407	1	602	602		8.4073	2.0864	1	1084200	+		52914	16156	35318	35331	59907	59907					-0.014849422420411429
RWWQWNRLKLY	11	Unmodified	_RWWQWNRLKLY_					0	0	0			REV__ENSG00000100345|ENST00000216181|MYH9	REV__ENSG00000100345|ENST00000216181|MYH9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9321594238281	4	412.976939	1647.87865	0.21472	8.8675E-05	2.8626	0.0011822	3.0773	0.0012709	412.9790464581916	43.192	0.20035	43.248	43.112	43.313	0.056744					5	4	2	0	0	0	0.1841	1	2953	2953		3.2113	1.8894	1	41608	+		52915	17175	35319	35332	59908	59908					0.08062589936412223
RWWRRPRRPR	10	Unmodified	_RWWRRPRRPR_					0	0	0			REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	507.9692687988281	3	507.967738	1520.88138	0.79662	0.00040466	2.6434	0.0013428	3.44	0.0017474	507.96904890309173	16.674	0.54708	16.65	16.499	17.046	-0.024035					69	22	5	0	0	0	0.91405	1	169	169		7.0187	0.69781	1	1587100	+		52916	25704	35320	35333	59909	59909					0.1417790290454377
RWWRRPRRPRR	11	Unmodified	_RWWRRPRRPRR_					0	0	0			REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.2760009765625	3	560.001442	1676.9825	-0.16195	-9.0694E-05	-2.5867	-0.0014486	-2.7487	-0.0015393	560.3349873661095	52.737	0.6925	52.662	52.112	52.804	-0.074512					32	20	3	0	0	0	0.18425	1	4292	4292		0.3405	0.3405	1	156310	+		52917	25704	35321	35334	59910	59910					0.171083546072623
RWWRRPRRPRR	11	Unmodified	_RWWRRPRRPRR_					0	0	0			REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.824951171875	3	560.001442	1676.9825	0.96469	0.00054023	-2.9065	-0.0016277	-1.9418	-0.0010874	559.9999208140723	50.254	0.36202	51.099	50.974	51.336	0.845					13	8	2	0	0	0	0.18413	1	4979	4979		3.026	3.026	1	332700	+		52918	25704	35321	35334	59911	59911					0.171083546072623
RWWRRPRRPRR	11	Unmodified	_RWWRRPRRPRR_					0	0	0			REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	560.001442	1676.9825	0.29946	0.0001677	-2.731	-0.0015293	-2.4315	-0.0013616	559.9998779210313	52.451	0.44848	52.492	52.387	52.835	0.040592	-0.085229	-0.00030448	NaN	0.3405	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161330	+		52919	25704	35321	35334							0.171083546072623
RWWRRPRRPRR	11	Unmodified	_RWWRRPRRPRR_					0	0	0			REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	560.001442	1676.9825	0.42633	0.00023874	-1.7934	-0.0010043	-1.3671	-0.00076558	560.334930938794	52.506	0.48531	52.577	52.338	52.823	0.070709	6.5567E-06	0.0012706	NaN	0.3405	26	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129400	+		52920	25704	35321	35334							0.171083546072623
RWWRRRLWQLG	11	Unmodified	_RWWRRRLWQLG_					0	0	0		ENST00000284971.7_1_21:27102007-27107256:-|nuORF	ENST00000284971.7_1_21:27102007-27107256:-|nuORF	ENST00000284971.7_1_21:27102007-27107256:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3060913085938	3	538.307649	1611.90112	-1.4902	-0.00080218	-2.5219	-0.0013576	-4.0121	-0.0021598	538.3061488564512	110.54	0.85041	110.54	110.07	110.92	-0.0074387					67	26	4	0	0	0	0.8498	1	11803	11803		6.001	2.5923	1	283890			52921	9650	35322	35335	59912	59912					0.11964234124684481
RYAVPDFPH	9	Unmodified	_RYAVPDFPH_					0	0	0			REV__nc|ENSG00000085788|O94830-2|DDHD2	REV__nc|ENSG00000085788|O94830-2|DDHD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.2760620117188	2	551.277441	1100.54033	-0.071143	-3.922E-05	-3.619	-0.0019951	-3.6902	-0.0020343	551.2753010246721	26.996	0.99519	27.037	26.738	27.733	0.040834					84	31	4	0	0	0	0.58151	2	1208	1208;1216		47.916	3.7988	1	517830	+		52922	16898	35323	35336	59913;59914	59913					-0.005920079796851496
RYDYYSEY	8	Unmodified	_RYDYYSEY_					0	0	0			REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.2975463867188	2	579.740554	1157.46655	0.28654	0.00016612	-0.7898	-0.00045788	-0.50325	-0.00029176	579.7400186305806	34.958	0.34927	35.064	34.851	35.2	0.10603					17	13	2	0	0	0	0.4196	1	1816	1816		45.952	8.7928	1	108600	+		52923	18774	35324	35337	59915	59915					-0.10588020932664222
RYDYYSEY	8	Unmodified	_RYDYYSEY_					0	0	0			REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	579.740554	1157.46655	-0.31281	-0.00018135	-0.0028417	-1.6475E-06	-0.31565	-0.000183	579.7403222019493	35.205	0.61582	35.149	34.81	35.426	-0.056385	0.069778	-0.00029567	NaN	45.952	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	159050	+		52924	18774	35324	35337							-0.10588020932664222
RYDYYSEY	8	Unmodified	_RYDYYSEY_					0	0	0			REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	579.740554	1157.46655	-1.1689	-0.00067764	0.70054	0.00040613	-0.46833	-0.00027151	579.7408893877453	35.073	0.95142	35.079	34.477	35.428	0.0063934	0.00028875	0.00051988	NaN	45.952	30	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191800	+		52925	18774	35324	35337							-0.10588020932664222
RYDYYSEY	8	Unmodified	_RYDYYSEY_					0	0	0			REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	579.740554	1157.46655	0.56083	0.00032514	0.25112	0.00014559	0.81195	0.00047072	579.7403656864252	35.055	0.37061	35.094	34.97	35.34	0.038639	0.014932	-1.2093E-06	NaN	45.952	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60125	+		52926	18774	35324	35337							-0.10588020932664222
RYDYYSEY	8	Unmodified	_RYDYYSEY_					0	0	0			REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	579.740554	1157.46655	0.52696	0.0003055	-0.87846	-0.00050928	-0.35151	-0.00020378	579.7400014295157	35.045	0.31702	34.99	34.852	35.169	-0.055149	-0.088971	-0.0013109	NaN	45.952	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82592	+		52927	18774	35324	35337							-0.10588020932664222
RYELIRCRY	9	Unmodified	_RYELIRCRY_					0	0	0			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.5607604980469	3	424.560763	1270.66046	-0.25982	-0.00011031	0.31497	0.00013372	0.05515	2.3414E-05	424.5609168516135	27.601	1.5742	27.504	27.094	28.669	-0.096945					107	36	4	0	0	0	0.7932	1	1637	1637		22.58	2.2646	1	4915400	+		52928	23985	35325	35338	59916	59916					0.03595657022447085
RYFDTAVSR	9	Unmodified	_RYFDTAVSR_					0	0	0		nc|ENSG00000204525|P10321-2|HLA-C;ENSG00000204525|ENST00000376228|HLA-C;ENST00000484378.1_1_6:31239370-31239848:-|nuORF;ENST00000487245.5_1_6:31239370-31239763:-|nuORF	nc|ENSG00000204525|P10321-2|HLA-C	nc|ENSG00000204525|P10321-2|HLA-C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.7853393554688	2	557.78563	1113.55671	-0.92705	-0.0005171	0.59255	0.00033052	-0.3345	-0.00018658	557.785921557231	36.217	2.1138	36.198	35.42	37.533	-0.018673					120	46	5	0	0	0	8.5712E-239	7	2313	2269;2279;2289;2301;2313;2325;2339		288.6	112.51	1	2817100			52929	8454	35326	35339	59917;59918;59919;59920;59921;59922;59923	59921					0.0044707318641030724
RYFDTAVSR	9	Unmodified	_RYFDTAVSR_					0	0	0		nc|ENSG00000204525|P10321-2|HLA-C;ENSG00000204525|ENST00000376228|HLA-C;ENST00000484378.1_1_6:31239370-31239848:-|nuORF;ENST00000487245.5_1_6:31239370-31239763:-|nuORF	nc|ENSG00000204525|P10321-2|HLA-C	nc|ENSG00000204525|P10321-2|HLA-C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.7852783203125	2	557.78563	1113.55671	-0.36847	-0.00020553	0.016051	8.9531E-06	-0.35242	-0.00019658	557.7856278511022	36.232	1.7924	36.176	35.742	37.534	-0.055904					103	39	4	0	0	0	4.9543E-185	8	2393	2372;2381;2393;2405;2417;2430;2441;2467		272.66	115.33	1	3609700			52930	8454	35326	35339	59924;59925;59926;59927;59928;59929;59930;59931	59926					0.0044707318641030724
RYFDTAVSR	9	Unmodified	_RYFDTAVSR_					0	0	0		nc|ENSG00000204525|P10321-2|HLA-C;ENSG00000204525|ENST00000376228|HLA-C;ENST00000484378.1_1_6:31239370-31239848:-|nuORF;ENST00000487245.5_1_6:31239370-31239763:-|nuORF	nc|ENSG00000204525|P10321-2|HLA-C	nc|ENSG00000204525|P10321-2|HLA-C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.7852783203125	2	557.78563	1113.55671	-0.59303	-0.00033078	0.091938	5.1282E-05	-0.50109	-0.0002795	557.7856451288519	36.163	2.1994	36.172	35.522	37.722	0.0092773					117	48	5	0	0	0	3.5379E-98	9	2329	2296;2305;2316;2329;2341;2354;2366;2379;2390		237.92	80.596	1	3352300			52931	8454	35326	35339	59932;59933;59934;59935;59936;59937;59938;59939;59940	59935					0.0044707318641030724
RYFKIAKS	8	Unmodified	_RYFKIAKS_					0	0	0			REV__nc|ENSG00000032742|Q13099-3|IFT88	REV__nc|ENSG00000032742|Q13099-3|IFT88	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.7981262207031	2	506.800552	1011.58655	-0.1225	-6.2083E-05	1.1991	0.00060769	1.0766	0.00054561	506.8011249172422	46.216	2.1586	46.137	45.418	47.576	-0.079006					85	63	2	0	0	0	0.89494	1	3548	3548		37.159	6.6555	1	271040	+		52932	16279	35327	35340	59941	59941					0.08122056922411502
RYFSTAVSR	9	Unmodified	_RYFSTAVSR_					0	0	0		nc|ENSG00000204642|P30511|HLA-F;ENSG00000204642|ENST00000259951|HLA-F;ENST00000486194.1_1_6:29691304-29692118:+|nuORF;nc|ENSG00000204642|P30511-2|HLA-F	nc|ENSG00000204642|P30511|HLA-F	nc|ENSG00000204642|P30511|HLA-F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	543.7880249023438	2	543.788173	1085.56179	-0.13722	-7.462E-05	-0.003759	-2.0441E-06	-0.14098	-7.6664E-05	543.7880009644933	33.057	0.747	33.06	32.762	33.509	0.0030785					35	16	3	0	0	0	0.14386	2	1900	1900;1913		84.916	8.1414	1	283920			52933	8474	35328	35341	59942;59943	59942					0.02243377049035189
RYFSTAVSR	9	Unmodified	_RYFSTAVSR_					0	0	0		nc|ENSG00000204642|P30511|HLA-F;ENSG00000204642|ENST00000259951|HLA-F;ENST00000486194.1_1_6:29691304-29692118:+|nuORF;nc|ENSG00000204642|P30511-2|HLA-F	nc|ENSG00000204642|P30511|HLA-F	nc|ENSG00000204642|P30511|HLA-F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.7877197265625	2	543.788173	1085.56179	0.44304	0.00024092	-0.65602	-0.00035673	-0.21297	-0.00011581	543.7876407845769	33.288	0.85064	33.234	32.936	33.787	-0.054337					45	20	3	0	0	0	0.085559	4	2014	1998;2005;2014;2024		96.034	34.843	1	354110			52934	8474	35328	35341	59944;59945;59946;59947	59946					0.02243377049035189
RYFSTAVSR	9	Unmodified	_RYFSTAVSR_					0	0	0		nc|ENSG00000204642|P30511|HLA-F;ENSG00000204642|ENST00000259951|HLA-F;ENST00000486194.1_1_6:29691304-29692118:+|nuORF;nc|ENSG00000204642|P30511-2|HLA-F	nc|ENSG00000204642|P30511|HLA-F	nc|ENSG00000204642|P30511|HLA-F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.7879028320312	2	543.788173	1085.56179	0.086849	4.7227E-05	-0.24507	-0.00013327	-0.15822	-8.6039E-05	543.7878508528075	33.084	0.99409	33.082	32.75	33.744	-0.0016327					48	23	3	0	0	0	0.34325	2	1936	1923;1936		61.691	2.9122	1	324090			52935	8474	35328	35341	59948;59949	59949					0.02243377049035189
RYFTPTVFTFR	11	Unmodified	_RYFTPTVFTFR_					0	0	0			REV__ENSG00000114554|ENST00000393409|PLXNA1	REV__ENSG00000114554|ENST00000393409|PLXNA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.92120361328125	3	478.922467	1433.74557	-1.8707	-0.00089594	-2.0594	-0.00098631	-3.9302	-0.0018822	479.25567644702744	31.667	0.49841	31.667	31.411	31.91	0					25	18	2	0	0	0	0.76892	1	1541	1541		17.833	2.5	1	54059	+		52936	18055	35329	35342	59950	59950					0.046047257598502256
RYFYKQKRTKR	11	Unmodified	_RYFYKQKRTKR_					0	0	0			REV__ENST00000416636.2_1_7:23624683-23625604:-|nuORF	REV__ENST00000416636.2_1_7:23624683-23625604:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.9810791015625	3	525.307314	1572.90011	3.9553	0.0020777	3.8535	0.0020243	7.8088	0.004102	525.3077170758435	104.92	1.8829	105.15	104.51	106.4	0.2268					138	50	5	0	0	0	0.84494	1	12820	12820		6.3209	0.31984	1	329530	+		52937	22128	35330	35343	59951	59951					0.13657974965076392
RYGASLKLLDF	11	Unmodified	_RYGASLKLLDF_					0	0	0		nc|ENSG00000182670|P53804-3|TTC3;nc|ENSG00000182670|P53804-2|TTC3;ENSG00000182670|ENST00000418766|TTC3	nc|ENSG00000182670|P53804-3|TTC3	nc|ENSG00000182670|P53804-3|TTC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.36181640625	2	641.861338	1281.70812	1.706	0.001095	-4.3678	-0.0028035	-2.6617	-0.0017085	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.70737	1	13039	13039		30.318	1.1477	1	27133000			52938	7469	35331	35344	59952	59952					0.0785363449426768
RYGEHSPKQ	9	Unmodified	_RYGEHSPKQ_					0	0	0		nc|ENSG00000170153|Q9ULK6-2|RNF150;nc|ENSG00000170153|Q9ULK6-3|RNF150;ENSG00000170153|ENST00000515673|RNF150	nc|ENSG00000170153|Q9ULK6-2|RNF150	nc|ENSG00000170153|Q9ULK6-2|RNF150	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.2757568359375	2	551.275429	1100.53631	-0.071144	-3.922E-05	0.029547	1.6288E-05	-0.041597	-2.2931E-05	551.2753010246721	26.996	0.99519	27.037	26.738	27.733	0.040834					84	31	4	0	0	0	0.67345	2	1166	1166;1175		42.396	4.5846	1	517830			52939	6563	35332	35345	59953;59954	59953					-0.00994097473403599
RYGEHSPKQ	9	Unmodified	_RYGEHSPKQ_					0	0	0		nc|ENSG00000170153|Q9ULK6-2|RNF150;nc|ENSG00000170153|Q9ULK6-3|RNF150;ENSG00000170153|ENST00000515673|RNF150	nc|ENSG00000170153|Q9ULK6-2|RNF150	nc|ENSG00000170153|Q9ULK6-2|RNF150	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.2755126953125	2	551.275429	1100.53631	0.32503	0.00017918	-0.37436	-0.00020638	-0.04933	-2.7194E-05	551.2751109394707	27.083	1.2037	27.045	26.676	27.88	-0.038523					78	29	4	0	0	0	0.76764	1	1301	1301		34.173	0	1	656180			52940	6563	35332	35345	59955	59955					-0.00994097473403599
RYGQGSVR	8	Unmodified	_RYGQGSVR_					0	0	0		ENST00000479637.1_1_7:154664335-154668756:+|nuORF	ENST00000479637.1_1_7:154664335-154668756:+|nuORF	ENST00000479637.1_1_7:154664335-154668756:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.7464904785156	2	461.746308	921.478063	-0.10939	-5.0511E-05	0.27939	0.00012901	0.17	7.8498E-05	461.7463053326962	20.277	0.58719	19.647	19.397	19.984	-0.62961					29	12	3	0	0	0	0.79403	1	623	623		63.306	0	1	447280			52941	12411	35333	35346	59956	59956					0.014182656719981424
RYHALLIP	8	Unmodified	_RYHALLIP_					0	0	0		ENST00000532320.5_1_11:771189-774104:-|nuORF;ENSG00000177225|ENST00000319863|GATD1;nc|ENSG00000177225|Q8NB37-2|GATD1	ENST00000532320.5_1_11:771189-774104:-|nuORF	ENST00000532320.5_1_11:771189-774104:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7962951660156	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.87807	1	4597	4597		31.579	7.3761	1	792830			52942	7130	35334	35347	59957	59957					0.08446074267999393
RYHALLIP	8	Unmodified	_RYHALLIP_					0	0	0		ENST00000532320.5_1_11:771189-774104:-|nuORF;ENSG00000177225|ENST00000319863|GATD1;nc|ENSG00000177225|Q8NB37-2|GATD1	ENST00000532320.5_1_11:771189-774104:-|nuORF	ENST00000532320.5_1_11:771189-774104:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7994079589844	2	491.795269	981.575986	-2.308	-0.0011351	4.1081	0.0020204	1.8001	0.00088528	491.7972659418399	66.608	0.76704	66.637	66.27	67.037	0.028587					49	36	2	0	0	0	0.81548	1	6308	6308		20.482	1.1219	1	82032			52943	7130	35334	35347	59958	59958					0.08446074267999393
RYHALLIP	8	Unmodified	_RYHALLIP_					0	0	0		ENST00000532320.5_1_11:771189-774104:-|nuORF;ENSG00000177225|ENST00000319863|GATD1;nc|ENSG00000177225|Q8NB37-2|GATD1	ENST00000532320.5_1_11:771189-774104:-|nuORF	ENST00000532320.5_1_11:771189-774104:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7965393066406	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.289	1	60.29	59.79	60.79	0.00051117								0	0	0	0.29353	1	5214	5214		28.254	1.4582	1				52944	7130	35334	35347	59959	59959					0.08446074267999393
RYHALLIP	8	Unmodified	_RYHALLIP_					0	0	0		ENST00000532320.5_1_11:771189-774104:-|nuORF;ENSG00000177225|ENST00000319863|GATD1;nc|ENSG00000177225|Q8NB37-2|GATD1	ENST00000532320.5_1_11:771189-774104:-|nuORF	ENST00000532320.5_1_11:771189-774104:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79510498046875	2	491.795269	981.575986	-1.1725	-0.00057664	2.0381	0.0010023	0.86553	0.00042567	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.86791	1	4406	4406		28.254	0	1	3001500			52945	7130	35334	35347	59960	59960					0.08446074267999393
RYIPPAPAS	9	Unmodified	_RYIPPAPAS_					0	0	0		ENST00000401533.6_1_2:26409082-26410272:+|nuORF	ENST00000401533.6_1_2:26409082-26410272:+|nuORF	ENST00000401533.6_1_2:26409082-26410272:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.2672424316406	2	486.269084	970.523616	-1.0938	-0.00053186	-2.8649	-0.0013931	-3.9586	-0.0019249	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.78058	1	8671	8671		30.504	1.3336	1	1852700			52946	11237	35335	35348	59961	59961					0.03717491134352713
RYIYYLITKKR	11	Unmodified	_RYIYYLITKKR_					0	0	0		ENSG00000124596|ENST00000424266|OARD1	ENSG00000124596|ENST00000424266|OARD1	ENSG00000124596|ENST00000424266|OARD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.85308837890625	3	506.304799	1515.89257	2.9446	0.0014909	3.4023	0.0017226	6.3469	0.0032135	506.3061722565098	109.09	0.22696	109.07	109	109.23	-0.029381					11	7	2	0	0	0	0.18238	1	12108	12108		9.2118	5.8031	1	944750			52947	3348	35336	35349	59962	59962					0.15525822644804066
RYIYYLITKKR	11	Unmodified	_RYIYYLITKKR_					0	0	0		ENSG00000124596|ENST00000424266|OARD1	ENSG00000124596|ENST00000424266|OARD1	ENSG00000124596|ENST00000424266|OARD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	506.304799	1515.89257	-0.056661	-2.8688E-05	7.5821	0.0038389	7.5254	0.0038102	506.3093205772209	109.21	0.090446	109.16	109.08	109.18	-0.049332	0.045317	0.0032737	NaN	9.2118	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	454550			52948	3348	35336	35349							0.15525822644804066
RYKASLFVPI	10	Unmodified	_RYKASLFVPI_					0	0	0		ENST00000535149.5_1_X:70503274-70503361:+|nuORF	ENST00000535149.5_1_X:70503274-70503361:+|nuORF	ENST00000535149.5_1_X:70503274-70503361:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.856201171875	2	597.355691	1192.69683	0.84117	0.00050248	-0.70528	-0.0004213	0.1359	8.1178E-05	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.86763	1	9572	9572		26.693	0	1	18777000			52949	13419	35337	35350	59963	59963					0.10818857190793096
RYKFRTWRQLW	11	Unmodified	_RYKFRTWRQLW_					0	0	0		nc|ENSG00000239900|P30566-2|ADSL;ENSG00000239900|ENST00000623063|ADSL	nc|ENSG00000239900|P30566-2|ADSL	nc|ENSG00000239900|P30566-2|ADSL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.3128662109375	3	547.303793	1638.88955	1.2663	0.00069306	1.326	0.00072575	2.5924	0.0014188	547.3043895764332	110.6	1.7189	110.63	109.96	111.68	0.031746					144	61	4	0	0	0	0.91779	1	12119	12119		1.523	0.10423	1	383470			52950	8774	35338	35351	59964	59964					0.095659923106723
RYKHLLFHVL	10	Unmodified	_RYKHLLFHVL_					0	0	0			REV__ENSG00000267978|ENST00000595065|MAGEA9B	REV__ENSG00000267978|ENST00000595065|MAGEA9B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.60125732421875	3	442.599547	1324.77681	2.7378	0.0012118	0.76324	0.00033781	3.5011	0.0015496	442.5997945412009	103.8	1.4388	103.76	103.37	104.81	-0.043755					90	34	4	0	0	0	0.86047	1	11466	11466		23.523	4.9916	1	569000	+		52951	18547	35339	35352	59965	59965					0.1274134358466199
RYKLIPGKLPT	11	Unmodified	_RYKLIPGKLPT_					0	0	0		ENST00000379026.6_1_19:36133589-36134644:+|nuORF	ENST00000379026.6_1_19:36133589-36134644:+|nuORF	ENST00000379026.6_1_19:36133589-36134644:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4069213867188	2	643.403173	1284.79179	1.6039	0.001032	2.8597	0.0018399	4.4636	0.0028719	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.7144	1	11468	11468		29.17	0	1	21138000			52952	10881	35340	35353	59966	59966					0.16078790662004394
RYKNRTILGY	10	Unmodified	_RYKNRTILGY_					0	0	0		ENST00000527224.1_1_11:65837957-65984297:+|nuORF;ENSG00000175115|ENST00000320580|PACS1;nc|ENSG00000175115|Q6VY07-2|PACS1;nc|ENSG00000179364|Q86VP3-4|PACS2;nc|ENSG00000179364|Q86VP3|PACS2;ENSG00000179364|ENST00000447393|PACS2;ENST00000552138.5_1_14:105821400-105836438:+|nuORF	ENST00000527224.1_1_11:65837957-65984297:+|nuORF;nc|ENSG00000179364|Q86VP3-4|PACS2	nc|ENSG00000179364|Q86VP3-4|PACS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.3623657226562	2	642.364579	1282.7146	0.94221	0.00060524	-4.128	-0.0026517	-3.1858	-0.0020465	642.362532628932	110	1.3046	110.07	109.67	110.98	0.073685					156	47	4	0	0	0	0.8545	1	11910	11910		36.447	3.6962	1	7000400			52953	7267;6991	35341	35354	59967	59967					0.0845557244565498
RYKPRLLEA	9	Unmodified	_RYKPRLLEA_					0	0	0			REV__ENSG00000163346|ENST00000368463|PBXIP1	REV__ENSG00000163346|ENST00000368463|PBXIP1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.4085083007812	2	573.343115	1144.67168	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.81	1	107.92	107.42	108.42	0.11715								0	0	0	0.30416	1	13187	13187		29.15	1.0681	1		+		52954	20901	35342	35355	59968	59968					0.1051280238821164
RYLGTLLRVF	10	Unmodified	_RYLGTLLRVF_					0	0	0			REV__ENSG00000144867|ENST00000678299|SRPRB	REV__ENSG00000144867|ENST00000678299|SRPRB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.3715209960938	2	619.374415	1236.73428	-0.10661	-6.6034E-05	-3.8471	-0.0023828	-3.9537	-0.0024488	619.3719649656875	101.89	1.4654	101.89	101.45	102.91	0					98	36	4	0	0	0	0.86763	1	10370	10370		26.693	2.1737	1	1989800	+		52955	19917	35343	35356	59969	59969					0.1253794845642915
RYLGTLLRVF	10	Unmodified	_RYLGTLLRVF_					0	0	0			REV__ENSG00000144867|ENST00000678299|SRPRB	REV__ENSG00000144867|ENST00000678299|SRPRB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.3717041015625	2	619.374415	1236.73428	0.91931	0.0005694	-4.3463	-0.002692	-3.4269	-0.0021226	619.3720836676316	101.53	1.7011	101.67	101.29	102.99	0.14102					92	41	4	0	0	0	0.8608	1	10673	10673		34.173	2.6427	1	2053400	+		52956	19917	35343	35356	59970	59970					0.1253794845642915
RYLKKGTF	8	Unmodified	_RYLKKGTF_					0	0	0		chr10:70065189-70075600|54|15.76|0.61|4.69|+|ENST00000676608|MACROH2A2,MACROH2A2;chr10:70083179-70090060|53|13.62|0.72|4.24|+|ENST00000678523|MACROH2A2,MACROH2A2;chr10:70093845-70109033|56|16.41|0.8|4.36|+|ENST00000677881|MACROH2A2,MACROH2A2;ENSG00000099284|ENST00000373255|MACROH2A2;chr10:70055177-70075600|52|10.65|0.24|5.49|+|ENST00000679349|MACROH2A2,MACROH2A2	chr10:70065189-70075600|54|15.76|0.61|4.69|+|ENST00000676608|MACROH2A2,MACROH2A2	chr10:70065189-70075600|54|15.76|0.61|4.69|+|ENST00000676608|MACROH2A2,MACROH2A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.79974365234375	2	506.800552	1011.58655	-0.49867	-0.00025273	1.4784	0.00074926	0.97973	0.00049653	506.80125930962566	45.611	0.78478	45.623	45.395	46.179	0.012058					40	21	2	0	0	0	0.79929	1	3302	3302		18.324	0	1	207840			52957	81	35344	35357	59971	59971					0.08122056922422871
RYLVVGRKRRK	11	Unmodified	_RYLVVGRKRRK_					0	0	0		nc|ENSG00000186416|O15226|NKRF;nc|ENSG00000186416|O15226-2|NKRF;ENSG00000186416|ENST00000688521|NKRF	nc|ENSG00000186416|O15226|NKRF	nc|ENSG00000186416|O15226|NKRF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.73077392578125	3	477.644149	1429.91062	0.5573	0.00026619	2.597	0.0012405	3.1543	0.0015067	477.97938747907114	24.91	0.062403	24.924	24.887	24.949	0.013994					4	2	2	0	0	0	0.18372	1	877	877		3.4087	0.19739	1	38593			52958	7794	35345	35358	59972	59972					0.2128600241019285
RYPFYYEMCWY	11	Unmodified	_RYPFYYEMCWY_					0	0	0		ENST00000538503.5_1_12:121882954-121987523:-|nuORF;nc|ENSG00000089094|Q8NHM5-4|KDM2B;nc|ENSG00000089094|Q8NHM5-2|KDM2B;nc|ENSG00000089094|Q8NHM5-3|KDM2B;ENSG00000089094|ENST00000377071|KDM2B;chr12:121578946-121579612|53|12.51|0.78|4.01|-|ENST00000446152|KDM2B,KDM2B;nc|ENSG00000089094|Q8NHM5-5|KDM2B;nc|ENSG00000173120|Q9Y2K7-3|KDM2A;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;ENSG00000173120|ENST00000529006|KDM2A	ENST00000538503.5_1_12:121882954-121987523:-|nuORF;nc|ENSG00000173120|Q9Y2K7-2|KDM2A	nc|ENSG00000173120|Q9Y2K7-2|KDM2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5645446777344	4	405.921712	1619.65774	0.068508	2.7809E-05	-1.6563	-0.00067233	-1.5878	-0.00064452	405.92150089912894	59.652	0.19319	59.62	59.53	59.723	-0.031727					5	4	2	0	0	0	0.18304	1	5591	5591		10.104	9.7325	1	53951			52959	1608;6829	35346	35359	59973	59973					-0.1272997921737442
RYPRRRGPPR	10	Unmodified	_RYPRRRGPPR_					0	0	0		ENSG00000065978|ENST00000321358|YBX1	ENSG00000065978|ENST00000321358|YBX1	ENSG00000065978|ENST00000321358|YBX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.5934753417969	3	437.593678	1309.7592	0.016944	7.4144E-06	0.025333	1.1085E-05	0.042276	1.85E-05	437.59358898344584	17.111	0.51696	17.173	16.92	17.437	0.062601					54	22	4	0	0	0	0.85981	1	217	217		35.152	4.0839	1	287190			52960	1147	35347	35360	59974	59974					0.11671441102339486
RYQQFKDFQR	10	Unmodified	_RYQQFKDFQR_					0	0	0		ENSG00000198563|ENST00000396172|DDX39B;nc|ENSG00000198563|Q13838-2|DDX39B;ENST00000587730.5_1_19:14519750-14520297:-|nuORF;ENST00000474961.5_1_6:31498213-31499248:-|nuORF;ENST00000588692.5_1_19:14519750-14520718:-|nuORF;ENST00000462256.5_1_6:31498213-31500844:-|nuORF;ENSG00000123136|ENST00000242776|DDX39A	ENSG00000198563|ENST00000396172|DDX39B	ENSG00000198563|ENST00000396172|DDX39B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.57781982421875	3	472.57747	1414.71058	-0.0071393	-3.3739E-06	-0.14288	-6.752E-05	-0.15002	-7.0894E-05	472.57740300986404	33.931	0.82567	33.926	33.593	34.419	-0.0047417					29	19	2	0	0	0	0.2855	1	1994	1994		73.841	33.783	1	142750			52961	8288	35348	35361	59975	59975					0.01981482951941871
RYQQFKDFQR	10	Unmodified	_RYQQFKDFQR_					0	0	0		ENSG00000198563|ENST00000396172|DDX39B;nc|ENSG00000198563|Q13838-2|DDX39B;ENST00000587730.5_1_19:14519750-14520297:-|nuORF;ENST00000474961.5_1_6:31498213-31499248:-|nuORF;ENST00000588692.5_1_19:14519750-14520718:-|nuORF;ENST00000462256.5_1_6:31498213-31500844:-|nuORF;ENSG00000123136|ENST00000242776|DDX39A	ENSG00000198563|ENST00000396172|DDX39B	ENSG00000198563|ENST00000396172|DDX39B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.5772399902344	3	472.57747	1414.71058	-0.46626	-0.00022034	0.23559	0.00011133	-0.23067	-0.00010901	472.57754406341894	33.991	0.98044	33.935	33.697	34.677	-0.056385					36	21	2	0	0	0	0.86742	2	2107	2107;2121		27.644	3.4121	1	149320			52962	8288	35348	35361	59976;59977	59976					0.01981482951941871
RYQQFKDFQR	10	Unmodified	_RYQQFKDFQR_					0	0	0		ENSG00000198563|ENST00000396172|DDX39B;nc|ENSG00000198563|Q13838-2|DDX39B;ENST00000587730.5_1_19:14519750-14520297:-|nuORF;ENST00000474961.5_1_6:31498213-31499248:-|nuORF;ENST00000588692.5_1_19:14519750-14520718:-|nuORF;ENST00000462256.5_1_6:31498213-31500844:-|nuORF;ENSG00000123136|ENST00000242776|DDX39A	ENSG00000198563|ENST00000396172|DDX39B	ENSG00000198563|ENST00000396172|DDX39B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.57763671875	3	472.57747	1414.71058	-1.4164	-0.00066935	1.1009	0.00052024	-0.31552	-0.00014911	472.5779259912522	33.91	0.93646	33.913	33.667	34.603	0.0026016					36	20	2	0	0	0	0.85086	3	2056	2018;2039;2056		36.528	9.7782	1	143210			52963	8288	35348	35361	59978;59979;59980	59980					0.01981482951941871
RYQQQVRRRWE	11	Unmodified	_RYQQQVRRRWE_					0	0	0		ENSG00000173237|ENST00000683896|C11orf86	ENSG00000173237|ENST00000683896|C11orf86	ENSG00000173237|ENST00000683896|C11orf86	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2387390136719	4	401.968374	1603.84439	0.39364	0.00015823	2.4737	0.00099433	2.8673	0.0011526	401.9691522064248	47.2	0.26124	47.672	47.432	47.693	0.47139					6	5	2	0	0	0	0.18131	1	4457	4457		17.833	11.512	1	72008			52964	6844	35349	35362	59981	59981					0.06662141777519537
RYRCRSPRHVR	11	Unmodified	_RYRCRSPRHVR_					0	0	0			REV__ENSG00000184574|ENST00000329858|LPAR5	REV__ENSG00000184574|ENST00000329858|LPAR5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.9404296875	3	495.94086	1484.80075	-1.6186	-0.00080275	-0.57559	-0.00028546	-2.1942	-0.0010882	495.94042028285827	42.728	0.5214	42.728	42.57	43.091	0					27	12	3	0	0	0	0.74771	1	3011	3011		22.562	9.0536	1	96341	+		52965	22693	35350	35363	59982	59982					0.07774253799357211
RYRKAKKSN	9	Unmodified	_RYRKAKKSN_					0	0	0		ENST00000587506.1_1_19:30528395-30528668:+|nuORF	ENST00000587506.1_1_19:30528395-30528668:+|nuORF	ENST00000587506.1_1_19:30528395-30528668:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.843017578125	2	575.843813	1149.67307	0.91732	0.00052823	-2.5477	-0.0014671	-1.6304	-0.00093886	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.7932	1	9558	9558		21.96	1.9631	1	5468500			52966	14193	35351	35364	59983	59983					0.10422436476983421
RYRKYYRANLL	11	Unmodified	_RYRKYYRANLL_					0	0	0			REV__ENST00000499077.2_2_3:131082982-131083279:+|nuORF	REV__ENST00000499077.2_2_3:131082982-131083279:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	505.9738464355469	3	505.956282	1514.84702	-0.05701	-2.8845E-05	3.8452	0.0019455	3.7882	0.0019167	506.29228233658733	107.9	0.10657	107.85	107.78	107.89	-0.042404					4	2	2	0	0	0	0.181	1	11752	11752		13.508	1.0751	1	585930	+		52967	27797	35352	35365	59984	59984					0.1101859718248761
RYRQKRKQRQL	11	Unmodified	_RYRQKRKQRQL_					0	0	0			REV__ENSG00000159450|ENST00000614923|TCHH	REV__ENSG00000159450|ENST00000614923|TCHH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	520.9838256835938	3	520.649963	1558.92806	3.1682	0.0016495	-3.6247	-0.0018872	-0.45653	-0.00023769	520.6479558016824	108.31	1.0632	108.28	108.15	109.21	-0.031487					64	44	2	0	0	0	0.76579	2	12020	12009;12020		18.531	9.3192	1	1841400	+		52968	20662	35353	35366	59985;59986	59986					0.17095297945206767
RYRTKIVKST	10	Unmodified	_RYRTKIVKST_					0	0	0			REV__ENSG00000014164|ENST00000262577|ZC3H3	REV__ENSG00000014164|ENST00000262577|ZC3H3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.9223327636719	3	417.922578	1250.7459	0.73411	0.0003068	-1.4619	-0.00061096	-0.7278	-0.00030416	417.9219647760214	105.64	2.8346	105.75	104.94	107.78	0.10766					247	69	5	0	0	0	0.85251	1	11351	11351		19.263	0	1	29053000	+		52969	16203	35354	35367	59987	59987					0.1305614547973164
RYRVPVLKW	9	Unmodified	_RYRVPVLKW_					0	0	0			REV__nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	REV__nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2486572265625	3	406.248625	1215.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.052	1	14.969	14.469	15.469	-0.083363								0	0	0	0.31437	1	6	6		25.574	4.5418	1		+		52970	29840	35355	35368	59988	59988					0.1248138552182354
RYSESIRIYFF	11	Unmodified	_RYSESIRIYFF_					0	0	0		ENST00000319801.9_1_2:20458010-20458052:-|nuORF	ENST00000319801.9_1_2:20458010-20458052:-|nuORF	ENST00000319801.9_1_2:20458010-20458052:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.2997131347656	3	494.257626	1479.75105	0.071524	3.5351E-05	1.288	0.00063659	1.3595	0.00067194	494.5927590822618	16.833	0.22309	16.346	16.189	16.412	-0.48718					5	4	2	0	0	0	0.18066	1	179	179		9.6461	0	1	25473			52971	10022	35356	35369	59989	59989					0.03036404551698979
RYSSAFTNR	9	Unmodified	_RYSSAFTNR_					0	0	0		ENSG00000102158|ENST00000618282|MAGT1;nc|ENSG00000102158|Q9H0U3-2|MAGT1;ENST00000476168.1_1_X:77112151-77150907:-|nuORF	ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.2755737304688	2	551.275429	1100.53631	-0.071144	-3.922E-05	0.029547	1.6288E-05	-0.041597	-2.2931E-05	551.2753010246721	26.996	0.99519	27.037	26.738	27.733	0.040834					84	31	4	0	0	0	0.16305	3	1192	1185;1192;1200		81.525	31.989	1	517830			52972	1993	35357	35370	59990;59991;59992	59991					-0.009940974733808616
RYSSAFTNR	9	Unmodified	_RYSSAFTNR_					0	0	0		ENSG00000102158|ENST00000618282|MAGT1;nc|ENSG00000102158|Q9H0U3-2|MAGT1;ENST00000476168.1_1_X:77112151-77150907:-|nuORF	ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.275390625	2	551.275429	1100.53631	0.32503	0.00017918	-0.37436	-0.00020638	-0.04933	-2.7194E-05	551.2751109394707	27.083	1.2037	27.045	26.676	27.88	-0.038523					78	29	4	0	0	0	0.2365	1	1289	1289		70.399	9.4266	1	656180			52973	1993	35357	35370	59993	59993					-0.009940974733808616
RYSSAFTNR	9	Unmodified	_RYSSAFTNR_					0	0	0		ENSG00000102158|ENST00000618282|MAGT1;nc|ENSG00000102158|Q9H0U3-2|MAGT1;ENST00000476168.1_1_X:77112151-77150907:-|nuORF	ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.2752685546875	2	551.275429	1100.53631	0.8757	0.00048275	-0.93134	-0.00051342	-0.055636	-3.0671E-05	551.2747934781779	27.265	1.266	27.237	26.749	28.015	-0.027706					88	32	4	0	0	0	0.015676	4	1229	1204;1219;1229;1239		128.6	62.173	1	621530			52974	1993	35357	35370	59994;59995;59996;59997	59996					-0.009940974733808616
RYVAQAGLEL	10	Unmodified	_RYVAQAGLEL_					0	0	0		nc|ENSG00000130167|Q9UKR8|TSPAN16;ENST00000492930.5_1_21:30458181-30474947:+|nuORF	nc|ENSG00000130167|Q9UKR8|TSPAN16	nc|ENSG00000130167|Q9UKR8|TSPAN16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3110961914062	2	560.31148	1118.60841	-0.76255	-0.00042726	1.8565	0.0010402	1.094	0.00061296	560.3118189812657	38.424	0.70507	38.374	38.117	38.822	-0.050373					37	15	3	0	0	0	0.28217	1	2699	2699		74.255	10.721	1	209740			52975	14903	35358	35371	59998	59998					0.05384816880314247
RYVGFLVRP	9	Unmodified	_RYVGFLVRP_					0	0	0			REV__ENST00000250617.6_1_X:135863043-135863112:-|nuORF	REV__ENST00000250617.6_1_X:135863043-135863112:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8301391601562	2	553.827101	1105.63965	1.287	0.00071279	4.2616	0.0023602	5.5486	0.003073	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.78058	1	9384	9384		30.504	4.9296	1	5348100	+		52976	24283	35359	35372	59999	59999					0.09105434705065818
RYWLTVVKV	9	Unmodified	_RYWLTVVKV_					0	0	0			REV__nc|ENSG00000170312|P06493-2|CDK1	REV__nc|ENSG00000170312|P06493-2|CDK1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3543701171875	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.33	1	119.31	118.81	119.81	-0.024033								0	0	0	0.3465	1	13223	13223		15.642	4.1308	1		+		52977	15477	35360	35373	60000	60000					0.11142874536335512
RYYAPVRQR	9	Unmodified	_RYYAPVRQR_					0	0	0		ENSG00000147130|ENST00000314425|ZMYM3;nc|ENSG00000147130|Q14202-2|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.56072998046875	3	403.559751	1207.65742	0.70065	0.00028275	-0.077772	-3.1386E-05	0.62288	0.00025137	403.5596050855879	22.48	0.98659	22.545	22.232	23.218	0.064745					76	37	3	0	0	0	0.18338	2	678	678;688		77.318	39.506	1	100540			52978	4884	35361	35374	60001;60002	60001					0.061901499599116505
RYYAPVRQR	9	Unmodified	_RYYAPVRQR_					0	0	0		ENSG00000147130|ENST00000314425|ZMYM3;nc|ENSG00000147130|Q14202-2|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.55963134765625	3	403.559751	1207.65742	-0.38238	-0.00015431	1.0711	0.00043226	0.68873	0.00027794	403.56005878614496	22.792	0.9348	22.733	22.419	23.353	-0.058668					76	31	3	0	0	0	0.77244	3	754	754;763;773		32.812	4.426	1	169720			52979	4884	35361	35374	60003;60004;60005	60003					0.061901499599116505
RYYAPVRQR	9	Unmodified	_RYYAPVRQR_					0	0	0		ENSG00000147130|ENST00000314425|ZMYM3;nc|ENSG00000147130|Q14202-2|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.5597839355469	3	403.559751	1207.65742	2.8514	0.0011507	-2.1435	-0.00086505	0.70785	0.00028566	403.5587881215693	22.775	1.0826	22.725	22.354	23.437	-0.050077					94	41	3	0	0	0	0.6204	4	713	694;699;707;713		45.972	15.403	1	140620			52980	4884	35361	35374	60006;60007;60008;60009	60009					0.061901499599116505
RYYIKSII	8	Unmodified	_RYYIKSII_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2;nc|ENSG00000135749|A6NKB5-4|PCNX2;nc|ENSG00000135749|A6NKB5-3|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3134155273438	2	528.316035	1054.61752	-1.5228	-0.00080452	-1.8629	-0.00098422	-3.3857	-0.0017887	528.3151474868954	98.282	1.1905	98.478	97.935	99.126	0.19585					48	26	2	0	0	0	0.90465	1	10151	10151		40.573	6.4001	1	327210			52981	4049	35362	35375	60010	60010					0.09239210236660256
SAAEEKALDD	10	Unmodified	_SAAEEKALDD_					0	0	0		nc|ENSG00000142303|Q9H324|ADAMTS10;ENSG00000142303|ENST00000597188|ADAMTS10;nc|ENSG00000142303|Q9H324-2|ADAMTS10	nc|ENSG00000142303|Q9H324|ADAMTS10	nc|ENSG00000142303|Q9H324|ADAMTS10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.7430419921875	2	524.743293	1047.47203	0.14982	7.8618E-05	0.8279	0.00043443	0.97772	0.00051305	524.7437165379287	25.809	0.79892	25.768	25.295	26.094	-0.041168					35	21	2	0	0	0	0.86106	1	1132	1132		33.922	1.1092	1	42596			52982	4556	35363	35376	60011	60011					-0.04980342140879657
SAAFPGASL	9	Unmodified	_SAAFPGASL_					0	0	0		nc|ENSG00000183283|Q15038-2|DAZAP2;ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	410.7135925292969	2	410.713611	819.412668	0.095419	3.919E-05	0.39103	0.0001606	0.48645	0.00019979	410.7136121840938	62.767	1.2993	63.155	62.578	63.877	0.3878					66	29	3	0	0	0	0.041233	4	6724	6712;6724;6737;6748		111.65	28.148	1	774930			52983	7516	35364	35377	60012;60013;60014;60015	60013					-0.004261485737060866
SAAFPGASL	9	Unmodified	_SAAFPGASL_					0	0	0		nc|ENSG00000183283|Q15038-2|DAZAP2;ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	410.7137451171875	2	410.713611	819.412668	0.017127	7.0343E-06	0.47894	0.00019671	0.49607	0.00020374	410.7136617468154	62.599	1.1936	63.154	62.646	63.84	0.55449					60	27	3	0	0	0	0.021087	5	6729	6708;6717;6729;6741;6754		124.59	32.404	1	867830			52984	7516	35364	35377	60016;60017;60018;60019;60020	60018					-0.004261485737060866
SAAGHVLVK	9	Unmodified	_SAAGHVLVK_					0	0	0		ENSG00000183508|ENST00000369448|TENT5C	ENSG00000183508|ENST00000369448|TENT5C	ENSG00000183508|ENST00000369448|TENT5C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.2634582519531	2	441.263802	880.513051	0.24922	0.00010997	0.031135	1.3739E-05	0.28036	0.00012371	441.2636965449396	22.999	0.84064	22.58	22.276	23.116	-0.41879					48	19	3	0	0	0	0.049188	3	976	976;983;993		108.09	44.781	1	420070			52985	7536	35365	35378	60021;60022;60023	60021					0.06801508479941276
SAAGHVLVK	9	Unmodified	_SAAGHVLVK_					0	0	0		ENSG00000183508|ENST00000369448|TENT5C	ENSG00000183508|ENST00000369448|TENT5C	ENSG00000183508|ENST00000369448|TENT5C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.2638244628906	2	441.263802	880.513051	0.86971	0.00038377	-0.54022	-0.00023838	0.32949	0.00014539	441.2633870099177	23.018	0.80794	22.444	22.201	23.009	-0.57415					40	19	3	0	0	0	0.14386	3	1002	987;993;1002		84.916	35.474	1	466070			52986	7536	35365	35378	60024;60025;60026	60026					0.06801508479941276
SAAGRAQAIL	10	Unmodified	_SAAGRAQAIL_					0	0	0			REV__ENSG00000130702|ENST00000252999|LAMA5	REV__ENSG00000130702|ENST00000252999|LAMA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2773132324219	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.86272	1	7692	7692		24.519	0.31644	1	1311100	+		52987	18894	35366	35379	60027	60027					0.06031992020314192
SAAGVIRVP	9	Unmodified	_SAAGVIRVP_					0	0	0		chr10:101132109-101134139|31|19.61|0.06|8.34|+|ENST00000463716|TLX1,TLX1;nc|ENSG00000107807|P31314-2|TLX1;ENSG00000107807|ENST00000370196|TLX1	chr10:101132109-101134139|31|19.61|0.06|8.34|+|ENST00000463716|TLX1,TLX1	chr10:101132109-101134139|31|19.61|0.06|8.34|+|ENST00000463716|TLX1,TLX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002014160156	2	435.263802	868.513051	-0.61697	-0.00026855	-3.6159	-0.0015739	-4.2329	-0.0018424	435.2622023467742	70.889	0.20972	71.274	71.126	71.336	0.38449					6	4	2	0	0	0	0.20789	1	7871	7871		23.042	0	1	44165			52988	61	35367	35380	60028	60028					0.07353508479945958
SAAHFPEP	8	Unmodified	_SAAHFPEP_					0	0	0		ENST00000590135.5_1_19:36234478-36235075:-|nuORF;ENST00000586476.5_1_19:36234478-36235258:-|nuORF;ENST00000592913.5_1_19:36233644-36235075:-|nuORF;ENST00000585554.5_1_19:36233644-36235273:-|nuORF;ENST00000588980.5_1_19:36234054-36235075:-|nuORF;ENST00000589429.5_3_19:36233501-36235273:-|nuORF;ENST00000589807.1_1_19:36233301-36235258:-|nuORF	ENST00000590135.5_1_19:36234478-36235075:-|nuORF	ENST00000590135.5_1_19:36234478-36235075:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3027038574219	2	428.20341	854.392267	0.28462	0.00012187	3.5132	0.0015044	3.7978	0.0016262	428.20485885244386	62.619	0.56194	63.174	62.863	63.425	0.55449					17	12	2	0	0	0	0.4196	1	6752	6752		24.203	0	1	50302			52989	14168	35368	35381	60029	60029					-0.040753192335273525
SAAILRVKSN	10	Unmodified	_SAAILRVKSN_					0	0	0			REV__ENST00000221232.9_1_19:54641535-54647226:+|nuORF	REV__ENST00000221232.9_1_19:54641535-54647226:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.820068359375	2	529.819473	1057.62439	2.384	0.0012631	0.065546	3.4727E-05	2.4495	0.0012978	529.8193122554347	104.74	1.2264	104.9	104.04	105.27	0.15583					44	30	2	0	0	0	0.86621	1	12746	12746		26.063	0.48933	1	320740	+		52990	24157	35369	35382	60030	60030					0.09788523117231307
SAAIPLTHSI	10	Unmodified	_SAAIPLTHSI_					0	0	0			REV__ENST00000559700.5_1_15:78584919-78588040:-|nuORF	REV__ENST00000559700.5_1_15:78584919-78588040:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.2928161621094	2	505.287474	1008.5604	0.92557	0.00046768	-0.74256	-0.00037521	0.18301	9.2473E-05	505.2867401779142	17.752	0.5279	17.131	16.919	17.447	-0.62141					30	13	3	0	0	0	0.86218	1	327	327		32.812	4.9302	1	685860	+		52991	19611	35370	35383	60031	60031					0.056457429602687625
SAAKTLKH	8	Unmodified	_SAAKTLKH_					0	0	0			REV__ENSG00000075568|ENST00000186436|TMEM131	REV__ENSG00000075568|ENST00000186436|TMEM131	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	427.3026123046875	2	428.255977	854.497401	-1.7006	-0.00072828	0.38058	0.00016298	-1.32	-0.0005653	428.2558611886334	72.637	0.54373	72.769	72.419	72.963	0.13146					24	18	2	0	0	0	0.4196	1	6633	6633		29.15	13.508	1	98053	+		52992	16713	35371	35384	60032	60032					0.06433221962890912
SAAPALRPTPL	11	Unmodified	_SAAPALRPTPL_					0	0	0			REV__ENST00000485390.5_1_1:45241798-45242410:+|nuORF	REV__ENST00000485390.5_1_1:45241798-45242410:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8402099609375	2	547.321848	1092.62914	-0.49832	-0.00027274	-0.99858	-0.00054654	-1.4969	-0.00081928	547.3198437501526	101.18	0.2932	101.18	100.95	101.24	0					9	6	2	0	0	0	0.17551	1	10263	10263		37.812	14.289	1	37389	+		52993	25710	35372	35385	60033	60033					0.08653407259998858
SAAPARPR	8	Unmodified	_SAAPARPR_					0	0	0			REV__ENSG00000158457|ENST00000486685|TSPAN33	REV__ENSG00000158457|ENST00000486685|TSPAN33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.23809814453125	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.87479	1	7389	7389		30.504	0	1	1692300	+		52994	20607	35373	35386	60034	60034					0.04243184505901354
SAAQPLLR	8	Unmodified	_SAAQPLLR_					0	0	0		ENSG00000242950|ENST00000603053|ERVW-1	ENSG00000242950|ENST00000603053|ERVW-1	ENSG00000242950|ENST00000603053|ERVW-1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3027648925781	2	428.255977	854.497401	0.68145	0.00029184	-2.2886	-0.00098013	-1.6072	-0.00068829	428.2549190518448	68.101	0.63692	68.485	68.269	68.906	0.38482					21	14	2	0	0	0	0.4196	1	7520	7520		55.504	7.5886	1	61401			52995	8804	35374	35387	60035	60035					0.06433221962890912
SAASPSFAVL	10	Unmodified	_SAASPSFAVL_					0	0	0			REV__ENST00000534251.1_1_22:36545122-36552993:-|nuORF	REV__ENST00000534251.1_1_22:36545122-36552993:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	475.2541198730469	2	475.2531	948.491647	-2.0503	-0.00097439	-0.79383	-0.00037727	-2.8441	-0.0013517	475.2526576119572	20.069	0.35871	20.069	19.855	20.214	0					25	16	2	0	0	0	0.86718	1	458	458		27.882	0	1	48377	+		52996	28364	35375	35388	60036	60036					0.01534078660574778
SACVGPLRV	9	Unmodified	_SACVGPLRV_					0	0	0			REV__ENST00000585652.5_1_19:2109366-2109738:-|nuORF	REV__ENST00000585652.5_1_19:2109366-2109738:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.2491760253906	2	451.249837	900.485122	-1.4974	-0.0006757	-0.66318	-0.00029926	-2.1606	-0.00097496	451.2494003851712	63.042	1.3844	63.429	62.881	64.266	0.38779					66	31	3	0	0	0	0.7932	1	6778	6778		24.203	0	1	494160	+		52997	29094	35376	35389	60037	60037					0.0308986222820522
SADCSLID	8	Unmodified	_SADCSLID_					0	0	0		ENST00000587757.5_1_18:13612213-13612381:+|nuORF	ENST00000587757.5_1_18:13612213-13612381:+|nuORF	ENST00000587757.5_1_18:13612213-13612381:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.1798400878906	2	412.178743	822.342934	2.9113	0.0012	-0.39998	-0.00016486	2.5113	0.0010351	412.1784573510725	19.137	0.54625	19.062	18.847	19.393	-0.074974					30	18	2	0	0	0	0.92973	1	395	395		50.025	7.5501	1	80949			52998	14198	35377	35390	60038	60038					-0.07534395304651298
SADEAGDTSE	10	Unmodified	_SADEAGDTSE_					0	0	0			REV__nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	REV__nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.1866760253906	2	491.185808	980.357064	0.46609	0.00022894	-1.0109	-0.00049654	-0.54482	-0.00026761	491.1851925944041	64.496	1.2333	64.62	63.877	65.111	0.12396					67	44	2	0	0	0	0.8608	1	5647	5647		34.173	8.7224	1	159550	+		52999	22863	35378	35391	60039	60039					-0.13390071342644205
SADNFLRFGL	10	Unmodified	_SADNFLRFGL_					0	0	0		ENSG00000232434|ENST00000436881|AJM1	ENSG00000232434|ENST00000436881|AJM1	ENSG00000232434|ENST00000436881|AJM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.7984008789062	2	570.29583	1138.57711	0.50401	0.00028743	0.0121	6.9008E-06	0.51611	0.00029433	570.2974545613545	77.387	0.5437	77.512	77.332	77.875	0.12485					75	23	4	0	0	0	0.8651	1	7262	7262		25.574	0.44807	1	316310			53000	8741	35379	35392	60040	60040					0.013362438462309001
SADNFLRFGL	10	Unmodified	_SADNFLRFGL_					0	0	0		ENSG00000232434|ENST00000436881|AJM1	ENSG00000232434|ENST00000436881|AJM1	ENSG00000232434|ENST00000436881|AJM1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	570.29583	1138.57711	-1.1263	-0.00064233	1.8683	0.0010655	0.74202	0.00042317	570.2984653069458	77.688	0.41228	77.74	77.567	77.979	0.052696	0.12095	-0.00079723	NaN	25.574	47	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105130			53001	8741	35379	35392							0.013362438462309001
SADNFLRFGL	10	Unmodified	_SADNFLRFGL_					0	0	0		ENSG00000232434|ENST00000436881|AJM1	ENSG00000232434|ENST00000436881|AJM1	ENSG00000232434|ENST00000436881|AJM1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	570.29583	1138.57711	0.083712	4.7741E-05	3.5753	0.002039	3.659	0.0020867	570.2977005913631	77.764	0.37341	77.714	77.527	77.901	-0.050789	0.094305	0.0011497	NaN	25.574	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68789			53002	8741	35379	35392							0.013362438462309001
SADNFLRFGL	10	Unmodified	_SADNFLRFGL_					0	0	0		ENSG00000232434|ENST00000436881|AJM1	ENSG00000232434|ENST00000436881|AJM1	ENSG00000232434|ENST00000436881|AJM1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	570.29583	1138.57711	0.77913	0.00044434	2.6308	0.0015004	3.41	0.0019447	570.2971740690919	77.545	0.49223	77.594	77.448	77.94	0.04969	-0.024923	7.248E-05	NaN	25.574	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81411			53003	8741	35379	35392							0.013362438462309001
SADNFLRFGL	10	Unmodified	_SADNFLRFGL_					0	0	0		ENSG00000232434|ENST00000436881|AJM1	ENSG00000232434|ENST00000436881|AJM1	ENSG00000232434|ENST00000436881|AJM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	570.29583	1138.57711	0.66121	0.00037708	-0.89727	-0.00051171	-0.23606	-0.00013463	570.2971397792172	77.401	0.46272	77.536	77.315	77.778	0.13477	-0.083172	-0.0039516	NaN	25.574	70	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	354790			53004	8741	35379	35392							0.013362438462309001
SADSHDTWTCI	11	Carbamidomethyl (C)	_SADSHDTWTC(Carbamidomethyl (C))I_	SADSHDTWTC(1)I		SADSHDTWTC(41)I		0	1	0		ENST00000497858.1_1_1:38027150-38027537:+|nuORF	ENST00000497858.1_1_1:38027150-38027537:+|nuORF	ENST00000497858.1_1_1:38027150-38027537:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.5129699707031	3	431.511915	1291.51392	0.69549	0.00030011	1.9611	0.00084625	2.6566	0.0011464	431.5128002971517	22.321	1.5866	21.902	21.305	22.891	-0.41879					89	36	4	0	0	0	0.62914	1	910	910		41.08	14.33	1	1830900			53005	12814	35380	35393	60041	60041	167				-0.12018109723976522
SAEALTIQQY	10	Unmodified	_SAEALTIQQY_					0	0	0		ENST00000416764.5_1_3:185686359-185693154:+|nuORF;ENST00000306399.3_1_3:185686359-185697623:+|nuORF	ENST00000416764.5_1_3:185686359-185693154:+|nuORF	ENST00000416764.5_1_3:185686359-185693154:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.2869873046875	2	562.285128	1122.5557	0.51675	0.00029056	-0.84848	-0.00047709	-0.33174	-0.00018653	562.284398654235	50.369	0.61137	50.373	50.078	50.689	0.0045319					29	13	3	0	0	0	0.82886	1	4302	4302		37.812	0	1	188800			53006	9860	35381	35394	60042	60042					-0.0006718597312556085
SAEDQWFEY	9	Unmodified	_SAEDQWFEY_					0	0	0			REV__ENST00000494174.5_1_20:32245637-32248074:-|nuORF	REV__ENST00000494174.5_1_20:32245637-32248074:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	587.736572265625	2	587.738011	1173.46147	0.22118	0.00013	-1.6732	-0.00098343	-1.4521	-0.00085343	587.7374515912343	25.737	0.78595	25.696	25.265	26.05	-0.04117					31	21	2	0	0	0	0.62081	1	1118	1118		45.952	1.8352	1	39433	+		53007	18687	35382	35395	60043	60043					-0.1183232479529579
SAEEAEDHGR	10	Unmodified	_SAEEAEDHGR_					0	0	0		ENST00000460871.1_1_9:71990729-72006671:+|nuORF;nc|ENSG00000135063|Q15884|ENTREP1;ENSG00000135063|ENST00000303068|ENTREP1	ENST00000460871.1_1_9:71990729-72006671:+|nuORF	ENST00000460871.1_1_9:71990729-72006671:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.7328491210938	2	550.733791	1099.45303	2.5643	0.0014122	-4.256	-0.0023439	-1.6918	-0.00093171	550.7310212057594	25.674	0.67299	25.242	24.895	25.568	-0.4311					43	15	4	0	0	0	0.85834	1	1372	1372		22.58	0.61977	1	329660			53008	3979	35383	35396	60044	60044					-0.09271878711911086
SAENTLTK	8	Unmodified	_SAENTLTK_					0	0	0			REV__ENSG00000121578|ENST00000393765|B4GALT4	REV__ENSG00000121578|ENST00000393765|B4GALT4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.5129699707031	2	432.227082	862.439611	0.58548	0.00025306	0.13734	5.9362E-05	0.72282	0.00031242	432.22718244291485	22.551	0.45416	21.94	21.71	22.164	-0.6107					13	10	2	0	0	0	0.4196	1	905	905		51.335	0	1	34218	+		53009	18460	35384	35397	60045	60045					0.0028891524680147995
SAESIPCH	8	Unmodified	_SAESIPCH_					0	0	0		ENSG00000130590|ENST00000369886|SAMD10;ENST00000478694.1_1_20:62606865-62609703:-|nuORF	ENSG00000130590|ENST00000369886|SAMD10	ENSG00000130590|ENST00000369886|SAMD10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1881408691406	2	422.186903	842.359253	2.9776	0.0012571	1.3524	0.00057099	4.3301	0.0018281	422.18753686026554	102.31	0.6795	102.61	102.26	102.94	0.29865					42	15	4	0	0	0	0.884	1	12481	12481		33.516	6.7195	1	1901900			53010	3659	35385	35398	60046	60046					-0.06823269347887617
SAEVAYVAR	9	Unmodified	_SAEVAYVAR_					0	0	0			REV__nc|ENSG00000160310|P55345-5|PRMT2	REV__nc|ENSG00000160310|P55345-5|PRMT2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.2784118652344	2	483.256174	964.497795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.183	1	16.1	15.6	16.6	-0.083363								0	0	0	0.30416	1	116	116		29.15	2.3535	1		+		53011	29968	35386	35399	60047	60047					0.014125968920893683
SAFRKFLK	8	Unmodified	_SAFRKFLK_					0	0	0		ENST00000557054.1_1_14:20923524-20925664:+|nuORF	ENST00000557054.1_1_14:20923524-20925664:+|nuORF	ENST00000557054.1_1_14:20923524-20925664:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.8079528808594	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.79929	1	4327	4327		18.324	0.95945	1	2538600			53012	13761	35387	35400	60048	60048					0.09366360785043071
SAFVSRPAP	9	Unmodified	_SAFVSRPAP_					0	0	0			REV__chr19:19662433-19663271|14|14.93|0.67|4.48|-|1|None,ATP13A1|1	REV__chr19:19662433-19663271|14|14.93|0.67|4.48|-|1|None,ATP13A1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2542724609375	2	466.253434	930.492316	0.14963	6.9764E-05	0.4386	0.0002045	0.58823	0.00027426	466.2534991696802	60.959	1.2686	60.926	59.804	61.072	-0.032509					71	38	2	0	0	0	0.7932	1	5721	5721		25.574	1.0549	1	239520	+		53013	15692	35388	35401	60049	60049					0.024289181002814075
SAGKQVSF	8	Unmodified	_SAGKQVSF_					0	0	0			REV__ENSG00000144820|ENST00000273352|ADGRG7	REV__ENSG00000144820|ENST00000273352|ADGRG7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.21942138671875	2	412.21906	822.423567	1.3839	0.00057047	-0.32646	-0.00013457	1.0574	0.00043589	412.2188251361589	34.862	0.90005	35.072	34.769	35.67	0.21003					36	22	2	0	0	0	0.84341	1	2645	2645		24.203	3.7209	1	2508800	+		53014	19913	35389	35402	60050	60050					0.005252538005720453
SAGKQVSF	8	Unmodified	_SAGKQVSF_					0	0	0			REV__ENSG00000144820|ENST00000273352|ADGRG7	REV__ENSG00000144820|ENST00000273352|ADGRG7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.2196044921875	2	412.21906	822.423567	1.2472	0.00051414	0.02016	8.3105E-06	1.2674	0.00052245	412.21894629122863	34.843	0.97324	35.224	34.852	35.825	0.3812					45	24	3	0	0	0	0.92973	1	2650	2650		50.025	4.0726	1	2148400	+		53015	19913	35389	35402	60051	60051					0.005252538005720453
SAGKRSVK	8	Unmodified	_SAGKRSVK_					0	0	0		ENST00000367025.7_1_1:209933439-209933502:+|nuORF	ENST00000367025.7_1_1:209933439-209933502:+|nuORF	ENST00000367025.7_1_1:209933439-209933502:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.7552795410156	2	416.753601	831.49265	0.85655	0.00035697	2.7214	0.0011341	3.5779	0.0014911	416.7546905427035	66.077	1.7412	66.462	65.937	67.678	0.38581					138	48	4	0	0	0	0.88601	1	7234	7234		34.173	4.331	1	3980900			53016	10527	35390	35403	60052	60052					0.07016337820130047
SAHAGTYEV	9	Unmodified	_SAHAGTYEV_					0	0	0		ENST00000447375.1_1_X:153063080-153063885:+|nuORF;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4	ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000447375.1_1_X:153063080-153063885:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.71527099609375	2	467.716882	933.41921	0.51266	0.00023978	-3.3259	-0.0015556	-2.8132	-0.0013158	467.71522088082065	72.056	0.78386	72.186	71.901	72.685	0.1301					42	25	2	0	0	0	0.78536	1	6598	6598		29.15	3.5755	1	143620			53017	7354	35391	35404	60053	60053					-0.05016255413011095
SAIDRIFTL	9	Unmodified	_SAIDRIFTL_					0	0	0		ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.2943115234375	2	518.295299	1034.57605	0.66588	0.00034512	-0.048142	-2.4952E-05	0.61774	0.00032017	518.2951496195443	77.091	0.75919	77.491	77.295	78.054	0.39969					39	18	3	0	0	0	0.16822	1	8765	8765		80.455	36.338	1	829730			53018	7541	35392	35405	60054	60054					0.060140294773418645
SAIDRIFTL	9	Unmodified	_SAIDRIFTL_					0	0	0		ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2952270507812	2	518.295299	1034.57605	-0.11564	-5.9936E-05	0.24513	0.00012705	0.12949	6.7114E-05	518.29533424128	76.942	0.87077	77.51	77.308	78.179	0.56836					47	21	3	0	0	0	0.1516	1	8789	8789		83.647	21.54	1	1071400			53019	7541	35392	35405	60055	60055					0.060140294773418645
SAIFNFQSL	9	Unmodified	_SAIFNFQSL_					0	0	0		ENSG00000174695|ENST00000502346|TMEM167A	ENSG00000174695|ENST00000502346|TMEM167A	ENSG00000174695|ENST00000502346|TMEM167A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7662353515625	2	513.766374	1025.5182	1.0185	0.00052329	-0.53391	-0.00027431	0.48462	0.00024898	513.7658373506887	88.814	1.5148	89.265	88.557	90.072	0.45058					36	14	3	0	0	0	0.0358	2	10481	10481;10493		114.89	39.851	1	771940			53020	6954	35393	35406	60056;60057	60056					0.0064576755189591495
SAIFNFQSL	9	Unmodified	_SAIFNFQSL_					0	0	0		ENSG00000174695|ENST00000502346|TMEM167A	ENSG00000174695|ENST00000502346|TMEM167A	ENSG00000174695|ENST00000502346|TMEM167A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	513.766374	1025.5182	-0.98492	-0.00050602	1.3052	0.00067058	0.32031	0.00016457	513.7668529548504	88.892	1.4158	89.363	88.641	90.057	0.47068	0.049009	0.00063865	NaN	114.89	35	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	860000			53021	6954	35393	35406							0.0064576755189591495
SAIKENFQF	9	Unmodified	_SAIKENFQF_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.2755737304688	2	542.277106	1082.53966	-0.57634	-0.00031254	0.27272	0.00014789	-0.30362	-0.00016465	542.2770899005031	54.685	0.58858	55.253	55.069	55.658	0.56836					29	13	3	0	0	0	0.16822	2	5595	5595;5608		80.455	18.347	1	930580			53022	6838	35394	35407	60058;60059	60058					0.0016915258061089844
SAILIKID	8	Unmodified	_SAILIKID_					0	0	0			REV__nc|ENSG00000100644|Q16665-2|HIF1A	REV__nc|ENSG00000100644|Q16665-2|HIF1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7744140625	2	436.776211	871.537869	-2.0766	-0.000907	-3.9909	-0.0017431	-6.0675	-0.0026502	436.7744184885527	26.616	0.44571	26.616	26.401	26.847	0					29	19	2	0	0	0	0.80308	1	1026	1026		16.473	0	1	39578	+		53023	17211	35395	35408	60060	60060					0.09696143562666748
SAILRALWP	9	Unmodified	_SAILRALWP_					0	0	0			REV__ENSG00000141449|ENST00000424526|GREB1L	REV__ENSG00000141449|ENST00000424526|GREB1L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8084716796875	2	513.808377	1025.6022	-1.4445	-0.00074222	2.568	0.0013195	1.1235	0.00057724	513.8095757653756	47.922	1.7737	47.922	47.581	49.354	0					152	50	4	0	0	0	0.78058	2	3737	3737;3792		30.504	6.3009	1	1675700	+		53024	19687	35396	35409	60061;60062	60061					0.0904234343945518
SAILRALWP	9	Unmodified	_SAILRALWP_					0	0	0			REV__ENSG00000141449|ENST00000424526|GREB1L	REV__ENSG00000141449|ENST00000424526|GREB1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.8087158203125	2	513.808377	1025.6022	-0.65666	-0.0003374	1.6077	0.00082607	0.95108	0.00048867	513.8090545546751	47.78	2.1477	48.249	47.733	49.881	0.46941					113	53	4	0	0	0	0.78058	1	4584	4584		30.504	1.3541	1	3097000	+		53025	19687	35396	35409	60063	60063					0.0904234343945518
SAILVHLS	8	Unmodified	_SAILVHLS_					0	0	0		ENSG00000160221|ENST00000291577|GATD3;nc|ENSG00000160221|P0DPI2-2|GATD3;ENST00000480786.1_1_21:45553579-45560342:+|nuORF	ENSG00000160221|ENST00000291577|GATD3	ENSG00000160221|ENST00000291577|GATD3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2585754394531	2	420.252903	838.491253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.97	1	113	112.5	113.5	0.028854								0	0	0	0.30316	1	12335	12335		42.474	0	1				53026	5570	35397	35410	60064	60064					0.06554703731376321
SAIQAAVHLL	10	Unmodified	_SAIQAAVHLL_					0	0	0			REV__nc|ENSG00000204580|Q08345-2|DDR1	REV__nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.8066711425781	2	511.803291	1021.59203	-0.091352	-4.6754E-05	0.093881	4.8049E-05	0.0025299	1.2948E-06	511.80308180556005	17.552	0.21159	17.473	17.373	17.584	-0.079056					12	8	2	0	0	0	0.86471	1	222	222		30.318	4.8675	1	34152	+		53027	23505	35398	35411	60065	60065					0.08209735714228827
SAIQAAVHLL	10	Unmodified	_SAIQAAVHLL_					0	0	0			REV__nc|ENSG00000204580|Q08345-2|DDR1	REV__nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	511.803291	1021.59203	-0.091352	-4.6754E-05	0.093881	4.8049E-05	0.0025299	1.2948E-06	511.80308180556005	17.552	0.21159	17.473	17.373	17.584	-0.079056	-0.025054	0.00011615	NaN	30.318	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34152	+		53028	23505	35398	35411							0.08209735714228827
SAIQAAVHLL	10	Unmodified	_SAIQAAVHLL_					0	0	0			REV__nc|ENSG00000204580|Q08345-2|DDR1	REV__nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	511.803291	1021.59203	0.30859	0.00015794	-0.19272	-9.8632E-05	0.11588	5.9306E-05	511.80253808989045	17.602	0.16789	17.523	17.435	17.602	-0.078943	0.025054	-0.00017721	NaN	30.318	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20099	+		53029	23505	35398	35411							0.08209735714228827
SAKKLTDI	8	Unmodified	_SAKKLTDI_					0	0	0		ENSG00000115361|ENST00000233710|ACADL;ENST00000498120.5_1_2:211082687-211089924:-|nuORF	ENSG00000115361|ENST00000233710|ACADL	ENSG00000115361|ENST00000233710|ACADL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2637023925781	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.80959	1	2909	2909		15.642	0.77694	1	22029000			53030	2836	35399	35412	60066	60066					0.07010669040232642
SAKKTPVPWRL	11	Unmodified	_SAKKTPVPWRL_					0	0	0		nc|ENSG00000109794|A5PLN7-2|FAM149A;ENST00000515078.5_1_4:187070333-187088439:+|nuORF;nc|ENSG00000109794|A5PLN7-4|FAM149A;ENSG00000109794|ENST00000706927|FAM149A;nc|ENSG00000109794|A5PLN7|FAM149A	nc|ENSG00000109794|A5PLN7-2|FAM149A	nc|ENSG00000109794|A5PLN7-2|FAM149A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.88232421875	2	641.885147	1281.75574	-1.1528	-0.00073997	-3.087	-0.0019815	-4.2398	-0.0027215	641.8829970841505	95.709	2.5048	95.911	94.329	96.834	0.20242					216	59	5	0	0	0	0.53361	2	9816	9816;9864		49.536	3.5638	1	1922900			53031	2486	35400	35413	60067;60068	60067					0.12613333485114708
SAKKTPVPWRL	11	Unmodified	_SAKKTPVPWRL_					0	0	0		nc|ENSG00000109794|A5PLN7-2|FAM149A;ENST00000515078.5_1_4:187070333-187088439:+|nuORF;nc|ENSG00000109794|A5PLN7-4|FAM149A;ENSG00000109794|ENST00000706927|FAM149A;nc|ENSG00000109794|A5PLN7|FAM149A	nc|ENSG00000109794|A5PLN7-2|FAM149A	nc|ENSG00000109794|A5PLN7-2|FAM149A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	641.885147	1281.75574	1.3757	0.00088303	-5.2758	-0.0033865	-3.9001	-0.0025034	641.8814634648703	95.516	2.3262	95.936	94.617	96.943	0.42051	-0.0067195	-0.00041503	NaN	49.536	163	55	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1429800			53032	2486	35400	35413							0.12613333485114708
SAKKTPVPWRL	11	Unmodified	_SAKKTPVPWRL_					0	0	0		nc|ENSG00000109794|A5PLN7-2|FAM149A;ENST00000515078.5_1_4:187070333-187088439:+|nuORF;nc|ENSG00000109794|A5PLN7-4|FAM149A;ENSG00000109794|ENST00000706927|FAM149A;nc|ENSG00000109794|A5PLN7|FAM149A	nc|ENSG00000109794|A5PLN7-2|FAM149A	nc|ENSG00000109794|A5PLN7-2|FAM149A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	641.885147	1281.75574	1.9181	0.0012312	-5.4973	-0.0035286	-3.5792	-0.0022975	641.8811906318593	95.709	2.3248	96.128	94.694	97.018	0.41964	0.18532	-0.00069938	NaN	49.536	167	56	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1523500			53033	2486	35400	35413							0.12613333485114708
SAKLKESL	8	Unmodified	_SAKLKESL_					0	0	0			REV__nc|ENSG00000241839|Q8TD55-2|PLEKHO2	REV__nc|ENSG00000241839|Q8TD55-2|PLEKHO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2632141113281	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.84579	1	3297	3297		24.519	0.31644	1	4268300	+		53034	23825	35401	35414	60069	60069					0.07010669040232642
SAKSPWKSCF	10	Unmodified	_SAKSPWKSCF_					0	0	0		ENST00000526627.1_1_5:150158414-150175102:+|nuORF	ENST00000526627.1_1_5:150158414-150175102:+|nuORF	ENST00000526627.1_1_5:150158414-150175102:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.7803955078125	2	570.778959	1139.54336	-0.18434	-0.00010522	2.4073	0.001374	2.2229	0.0012688	570.7802323989869	24.979	0.85899	24.938	24.556	25.415	-0.041168					44	21	3	0	0	0	0.86348	1	1011	1011		31.53	1.0262	1	106130			53035	13265	35402	35415	60070	60070					-0.02082500917163088
SAKVVPTKFV	10	Unmodified	_SAKVVPTKFV_					0	0	0		nc|ENSG00000038427|P13611-5|VCAN;ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-2|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF	nc|ENSG00000038427|P13611-5|VCAN	nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3269653320312	2	538.329142	1074.64373	-0.54037	-0.0002909	-3.5463	-0.0019091	-4.0867	-0.0022	538.3271646052639	101.22	3.8034	101.22	100.55	104.36	0					314	93	6	0	0	0	0.76096	1	10499	10499		41.427	4.2675	1	48186000			53036	917	35403	35416	60071	60071					0.10939479408125408
SAKVVPTKFV	10	Unmodified	_SAKVVPTKFV_					0	0	0		nc|ENSG00000038427|P13611-5|VCAN;ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-2|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF	nc|ENSG00000038427|P13611-5|VCAN	nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3268432617188	2	538.329142	1074.64373	-0.51594	-0.00027775	-2.5307	-0.0013624	-3.0466	-0.0016401	538.3279060081551	104.84	1.38	104.84	104.13	105.51	0					86	33	3	0	0	0	0.86225	1	10799	10799		32.751	2.2469	1	591240			53037	917	35403	35416	60072	60072					0.10939479408125408
SAKVVPTKFV	10	Unmodified	_SAKVVPTKFV_					0	0	0		nc|ENSG00000038427|P13611-5|VCAN;ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-2|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF	nc|ENSG00000038427|P13611-5|VCAN	nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.326904296875	2	538.329142	1074.64373	-0.15636	-8.4174E-05	-4.0212	-0.0021647	-4.1776	-0.0022489	538.3269075153179	101.16	2.8222	101.19	100.44	103.26	0.031036					310	67	7	0	0	0	0.8545	1	10766	10766		36.447	4.4919	1	74691000			53038	917	35403	35416	60073	60073					0.10939479408125408
SAKVVPTKFV	10	Unmodified	_SAKVVPTKFV_					0	0	0		nc|ENSG00000038427|P13611-5|VCAN;ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-2|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF	nc|ENSG00000038427|P13611-5|VCAN	nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3269653320312	2	538.329142	1074.64373	-0.15533	-8.3621E-05	-3.2353	-0.0017416	-3.3906	-0.0018253	538.3273537952052	104.74	1.1783	104.72	104.15	105.33	-0.014809					78	27	4	0	0	0	0.86587	1	11305	11305		29.17	0	1	887790			53039	917	35403	35416	60074	60074					0.10939479408125408
SAKVVPTKFV	10	Unmodified	_SAKVVPTKFV_					0	0	0		nc|ENSG00000038427|P13611-5|VCAN;ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-2|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF	nc|ENSG00000038427|P13611-5|VCAN	nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3267822265625	2	538.329142	1074.64373	0.070633	3.8024E-05	-4.4231	-0.0023811	-4.3525	-0.0023431	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.8545	3	10579	10579;10748;10783		36.447	2.9312	1	109840000			53040	917	35403	35416	60075;60076;60077	60075					0.10939479408125408
SAKVVPTKFV	10	Unmodified	_SAKVVPTKFV_					0	0	0		nc|ENSG00000038427|P13611-5|VCAN;ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-2|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF	nc|ENSG00000038427|P13611-5|VCAN	nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3264770507812	2	538.329142	1074.64373	-1.4902	-0.0008022	-1.886	-0.0010153	-3.3762	-0.0018175	538.3280364010775	103.36	1.0546	103.48	103.07	104.12	0.11495					72	26	3	0	0	0	0.85834	1	10863	10863		22.58	0.61977	1	1412200			53041	917	35403	35416	60078	60078					0.10939479408125408
SAKVVPTKFV	10	Unmodified	_SAKVVPTKFV_					0	0	0		nc|ENSG00000038427|P13611-5|VCAN;ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-2|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF	nc|ENSG00000038427|P13611-5|VCAN	nc|ENSG00000038427|P13611-5|VCAN	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	538.329142	1074.64373	0.070451	3.7926E-05	-3.469	-0.0018675	-3.3986	-0.0018295	538.3272381280076	104.36	1.1253	104.53	103.89	105.01	0.17096	-0.11014	-1.1134E-05	NaN	32.751	89	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1335300			53042	917	35403	35416							0.10939479408125408
SALAGRWP	8	Unmodified	_SALAGRWP_					0	0	0			REV__ENST00000354670.8_1_15:40398252-40401051:-|nuORF	REV__ENST00000354670.8_1_15:40398252-40401051:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	429.23565673828125	2	429.235045	856.455536	-1.5383	-0.00066028	3.1941	0.001371	1.6559	0.00071075	429.23631228522396	63.563	2.4446	63.563	62.881	65.325	0					341	112	4	0	0	0	0.89962	1	5590	5590		38.806	5.2906	1	5885000	+		53043	25359	35404	35417	60079	60079					0.021566662743680354
SALAKRAR	8	Unmodified	_SALAKRAR_					0	0	0			REV__nc|ENSG00000012817|Q9BY66-2|KDM5D	REV__nc|ENSG00000012817|Q9BY66-2|KDM5D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2754211425781	2	436.774868	871.535184	0.39754	0.00017364	-3.7525	-0.001639	-3.355	-0.0014654	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.80308	1	1254	1254		16.473	0.83134	1	81327	+		53044	16191	35405	35418	60080	60080					0.09427732948370249
SALFKHIK	8	Unmodified	_SALFKHIK_					0	0	0		ENST00000237654.8_1_4:77969082-77969268:-|nuORF	ENST00000237654.8_1_4:77969082-77969268:-|nuORF	ENST00000237654.8_1_4:77969082-77969268:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2876281738281	2	472.28982	942.565087	-1.7052	-0.00080536	-2.8033	-0.001324	-4.5086	-0.0021293	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.87479	1	9635	9635		30.504	2.6214	1	40161000			53045	9239	35406	35419	60081	60081					0.0915067189371257
SALGFSGY	8	Unmodified	_SALGFSGY_					0	0	0			REV__ENST00000263174.8_1_1:100111748-100111862:+|nuORF	REV__ENST00000263174.8_1_1:100111748-100111862:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.19677734375	2	401.192511	800.370469	-0.10796	-4.3314E-05	1.7847	0.00071601	1.6767	0.00067269	401.1931638935362	82.025	0.85574	82.52	82.337	83.193	0.49475					24	20	2	0	0	0	0.4196	1	9521	9521		35.201	20.537	1	166540	+		53046	24441	35407	35420	60082	60082					-0.03770123982087625
SALGLPMRG	9	Unmodified	_SALGLPMRG_					0	0	0		ENST00000547321.5_1_12:70671967-70723393:+|nuORF;nc|ENSG00000111596|Q9NZN8-4|CNOT2;nc|ENSG00000111596|Q9NZN8-5|CNOT2;ENSG00000111596|ENST00000229195|CNOT2	ENST00000547321.5_1_12:70671967-70723393:+|nuORF	ENST00000547321.5_1_12:70671967-70723393:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2489929199219	2	451.249837	900.485122	-1.5029	-0.0006782	-0.52106	-0.00023513	-2.024	-0.00091333	451.24948444631724	65.955	1.2112	65.955	65.412	66.623	0					127	65	2	0	0	0	0.7932	1	5821	5821		23.042	0	1	815400			53047	2586	35408	35421	60083	60083					0.03089862228216589
SALGLPMRG	9	Unmodified	_SALGLPMRG_					0	0	0		ENST00000547321.5_1_12:70671967-70723393:+|nuORF;nc|ENSG00000111596|Q9NZN8-4|CNOT2;nc|ENSG00000111596|Q9NZN8-5|CNOT2;ENSG00000111596|ENST00000229195|CNOT2	ENST00000547321.5_1_12:70671967-70723393:+|nuORF	ENST00000547321.5_1_12:70671967-70723393:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2449951171875	2	451.249837	900.485122	-0.3832	-0.00017292	-1.7344	-0.00078264	-2.1176	-0.00095556	451.2489352445761	65.642	1.3866	65.607	65.049	66.435	-0.034798					101	71	2	0	0	0	0.78536	1	6313	6313		29.15	6.1071	1	1243000			53048	2586	35408	35421	60084	60084					0.03089862228216589
SALGRAPW	8	Unmodified	_SALGRAPW_					0	0	0		ENST00000373314.7_1_9:130268657-130269107:-|nuORF	ENST00000373314.7_1_9:130268657-130269107:-|nuORF	ENST00000373314.7_1_9:130268657-130269107:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	429.2356872558594	2	429.235045	856.455536	-1.5383	-0.00066028	3.1941	0.001371	1.6559	0.00071075	429.23631228522396	63.563	2.4446	63.563	62.881	65.325	0					341	112	4	0	0	0	0.89962	2	5555	5555;5577		47.916	10.552	1	5885000			53049	10741	35409	35422	60085;60086	60085					0.021566662743680354
SALGRAPW	8	Unmodified	_SALGRAPW_					0	0	0		ENST00000373314.7_1_9:130268657-130269107:-|nuORF	ENST00000373314.7_1_9:130268657-130269107:-|nuORF	ENST00000373314.7_1_9:130268657-130269107:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	429.235595703125	2	429.235045	856.455536	-0.18423	-7.9079E-05	1.7315	0.00074323	1.5473	0.00066416	429.2356552162288	63.259	2.3661	63.225	62.64	65.006	-0.03371					245	81	5	0	0	0	0.87922	1	6011	6011		31.955	6.5047	1	5881100			53050	10741	35409	35422	60087	60087					0.021566662743680354
SALGRAPW	8	Unmodified	_SALGRAPW_					0	0	0		ENST00000373314.7_1_9:130268657-130269107:-|nuORF	ENST00000373314.7_1_9:130268657-130269107:-|nuORF	ENST00000373314.7_1_9:130268657-130269107:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.23577880859375	2	429.235045	856.455536	0.92962	0.00039903	0.55362	0.00023763	1.4832	0.00063666	429.2351427168519	63.189	2.3191	63.218	62.635	64.954	0.028133					251	82	4	0	0	0	0.90465	1	5893	5893		40.573	0	1	5799800			53051	10741	35409	35422	60088	60088					0.021566662743680354
SALGRAPW	8	Unmodified	_SALGRAPW_					0	0	0		ENST00000373314.7_1_9:130268657-130269107:-|nuORF	ENST00000373314.7_1_9:130268657-130269107:-|nuORF	ENST00000373314.7_1_9:130268657-130269107:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.2355651855469	2	429.235045	856.455536	-1.7002	-0.00072977	3.2929	0.0014134	1.5927	0.00068365	429.23632496484737	63.188	2.3667	63.302	62.678	65.045	0.11389					282	104	4	0	0	0	0.85277	1	5535	5535		25.45	0	1	6358600			53052	10741	35409	35422	60089	60089					0.021566662743680354
SALGRAPW	8	Unmodified	_SALGRAPW_					0	0	0		ENST00000373314.7_1_9:130268657-130269107:-|nuORF	ENST00000373314.7_1_9:130268657-130269107:-|nuORF	ENST00000373314.7_1_9:130268657-130269107:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.23577880859375	2	429.235045	856.455536	0.39502	0.00016955	1.1956	0.00051318	1.5906	0.00068273	429.2354268655387	63.129	2.3304	63.252	62.677	65.007	0.12252					259	94	5	0	0	0	0.884	1	5503	5503		33.516	0	1	5976700			53053	10741	35409	35422	60090	60090					0.021566662743680354
SALHFAKQ	8	Unmodified	_SALHFAKQ_					0	0	0		ENSG00000196199|ENST00000361479|MPHOSPH8;nc|ENSG00000196199|Q99549-2|MPHOSPH8	ENSG00000196199|ENST00000361479|MPHOSPH8	ENSG00000196199|ENST00000361479|MPHOSPH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.24951171875	2	451.248152	900.481751	-0.60944	-0.00027501	2.0486	0.00092444	1.4392	0.00064943	451.24890898084885	67.67	1.2739	67.634	67.25	68.524	-0.035698					111	49	3	0	0	0	0.85277	1	6503	6503		25.45	1.2474	1	185140			53054	8025	35410	35423	60091	60091					0.02752935445857929
SALHFAKQ	8	Unmodified	_SALHFAKQ_					0	0	0		ENSG00000196199|ENST00000361479|MPHOSPH8;nc|ENSG00000196199|Q99549-2|MPHOSPH8	ENSG00000196199|ENST00000361479|MPHOSPH8	ENSG00000196199|ENST00000361479|MPHOSPH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.24810791015625	2	451.248152	900.481751	0.4571	0.00020627	0.75976	0.00034284	1.2169	0.00054911	451.2483516516998	67.877	1.2398	68.005	67.282	68.522	0.12748					79	46	2	0	0	0	0.90465	1	6096	6096		40.573	1.7665	1	170990			53055	8025	35410	35423	60092	60092					0.02752935445857929
SALHFAKQ	8	Unmodified	_SALHFAKQ_					0	0	0		ENSG00000196199|ENST00000361479|MPHOSPH8;nc|ENSG00000196199|Q99549-2|MPHOSPH8	ENSG00000196199|ENST00000361479|MPHOSPH8	ENSG00000196199|ENST00000361479|MPHOSPH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.248046875	2	451.248152	900.481751	-1.0589	-0.00047784	2.3174	0.0010457	1.2584	0.00056786	451.2490578408484	67.679	1.2813	67.739	67.313	68.595	0.059288					106	47	3	0	0	0	0.85277	1	6050	6050		25.45	0	1	166740			53056	8025	35410	35423	60093	60093					0.02752935445857929
SALHIAIEKR	10	Unmodified	_SALHIAIEKR_					0	0	0		ENSG00000187688|ENST00000338560|TRPV2	ENSG00000187688|ENST00000338560|TRPV2	ENSG00000187688|ENST00000338560|TRPV2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.7183227539062	2	569.340572	1136.66659	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.09	1	65.215	64.715	65.715	0.12545								0	0	0	0.45132	1	5760	5760		32.812	1.2826	1				53057	7870	35411	35424	60094	60094					0.10372498525589435
SALINKTK	8	Unmodified	_SALINKTK_					0	0	0			REV__ENSG00000132915|ENST00000255266|PDE6A	REV__ENSG00000132915|ENST00000255266|PDE6A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77105712890625	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.80959	1	2279	2279		15.642	0	1	1041500	+		53058	19043	35412	35425	60095	60095					0.0865437527713766
SALINKTK	8	Unmodified	_SALINKTK_					0	0	0			REV__ENSG00000132915|ENST00000255266|PDE6A	REV__ENSG00000132915|ENST00000255266|PDE6A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7716979980469	2	437.77146	873.528367	-0.032548	-1.4248E-05	0.67338	0.00029479	0.64083	0.00028054	437.77161269438426	38.189	0.59097	38.711	38.32	38.911	0.52235					36	14	3	0	0	0	0.8621	1	3141	3141		26.693	2.1737	1	1204300	+		53059	19043	35412	35425	60096	60096					0.0865437527713766
SALIPLFITT	10	Unmodified	_SALIPLFITT_					0	0	0			REV__ENSG00000007216|ENST00000314669|SLC13A2	REV__ENSG00000007216|ENST00000314669|SLC13A2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3274536132812	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.31	1	116.28	115.78	116.78	-0.02433								0	0	0	0.45132	1	12877	12877		20.947	2.6225	1		+		53060	16119	35413	35426	60097	60097					0.09816657313990618
SALIPVVSP	9	Unmodified	_SALIPVVSP_					0	0	0			REV__nc|ENSG00000130396|P55196-2|AFDN	REV__nc|ENSG00000130396|P55196-2|AFDN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78802490234375	2	441.768386	881.522219	0.18894	8.3468E-05	-0.46132	-0.0002038	-0.27238	-0.00012033	441.770180349222	39.265	0.61917	39.353	39.145	39.764	0.088375					29	16	3	0	0	0	0.20789	1	2412	2412		37.159	12.956	1	73934	+		53061	29839	35414	35427	60098	60098					0.07671857045613706
SALKPLLP	8	Unmodified	_SALKPLLP_					0	0	0		ENST00000253023.7_1_19:59070165-59070261:-|nuORF	ENST00000253023.7_1_19:59070165-59070261:-|nuORF	ENST00000253023.7_1_19:59070165-59070261:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77490234375	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.884	1	3316	3316		33.516	3.674	1	11423000			53062	9315	35415	35428	60099	60099					0.10712464770847419
SALKPLLP	8	Unmodified	_SALKPLLP_					0	0	0		ENST00000253023.7_1_19:59070165-59070261:-|nuORF	ENST00000253023.7_1_19:59070165-59070261:-|nuORF	ENST00000253023.7_1_19:59070165-59070261:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7749328613281	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.85277	2	2910	2869;2910		35.201	13.498	1	9723800			53063	9315	35415	35428	60100;60101	60101					0.10712464770847419
SALKPLLP	8	Unmodified	_SALKPLLP_					0	0	0		ENST00000253023.7_1_19:59070165-59070261:-|nuORF	ENST00000253023.7_1_19:59070165-59070261:-|nuORF	ENST00000253023.7_1_19:59070165-59070261:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7745056152344	2	419.773471	837.53239	-1.7976	-0.00075458	3.9115	0.0016419	2.1139	0.00088736	419.77504327395843	41.402	2.6775	41.816	41.329	44.007	0.4139					184	68	5	0	0	0	0.84341	1	3680	3680		24.203	0	1	169320000			53064	9315	35415	35428	60102	60102					0.10712464770847419
SALLIPQP	8	Unmodified	_SALLIPQP_					0	0	0		ENST00000370888.5_1_6:53787644-53787806:+|nuORF	ENST00000370888.5_1_6:53787644-53787806:+|nuORF	ENST00000370888.5_1_6:53787644-53787806:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7749328613281	2	419.755278	837.496004	0.2077	8.7185E-05	2.5752	0.001081	2.783	0.0011682	419.75583144283786	42.41	0.31174	42.475	42.332	42.643	0.065037					12	9	2	0	0	0	0.4196	1	2855	2855		45.952	0	1	65354			53065	10652	35416	35429	60103	60103					0.07075587874135181
SALLLLLSP	9	Unmodified	_SALLLLLSP_					0	0	0			REV__ENSG00000198804|ENST00000361624|MT-CO1	REV__ENSG00000198804|ENST00000361624|MT-CO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.80010986328125	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.7932	1	2967	2967		19.997	2.6318	1	1091400	+		53066	23387	35417	35430	60104	60104					0.11905003113804469
SALLLLPLS	9	Unmodified	_SALLLLPLS_					0	0	0		ENST00000527969.1_1_11:65637109-65637745:-|nuORF	ENST00000527969.1_1_11:65637109-65637745:-|nuORF	ENST00000527969.1_1_11:65637109-65637745:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8005676269531	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3096	3096		21.96	0	1	942760			53067	13293	35418	35431	60105	60105					0.11905003113804469
SALLLLPLS	9	Unmodified	_SALLLLPLS_					0	0	0		ENST00000527969.1_1_11:65637109-65637745:-|nuORF	ENST00000527969.1_1_11:65637109-65637745:-|nuORF	ENST00000527969.1_1_11:65637109-65637745:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.79986572265625	2	463.799686	925.584819	-1.9529	-0.00090576	3.5624	0.0016523	1.6095	0.0007465	463.801178460678	42.067	1.8831	42.764	41.947	43.83	0.69754					154	47	4	0	0	0	0.7932	2	3716	3675;3716		17.365	5.1581	1	6253400			53068	13293	35418	35431	60106;60107	60107					0.11905003113804469
SALLVHCP	8	Unmodified	_SALLVHCP_					0	0	0		nc|ENSG00000008323|Q3KR16-2|PLEKHG6;ENSG00000008323|ENST00000684764|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2262878417969	2	420.225831	838.437109	0.51189	0.00021511	4.143	0.001741	4.6549	0.0019561	420.22745728477395	76.673	2.5132	76.808	74.515	77.028	0.13478					135	81	3	0	0	0	0.90024	1	7030	7030		39.021	5.5059	1	323390			53069	743	35419	35432	60108	60108					0.01142788308152376
SALPVLLGL	9	Unmodified	_SALPVLLGL_					0	0	0			REV__ENST00000288699.10_1_2:27170417-27170630:+|nuORF	REV__ENST00000288699.10_1_2:27170417-27170630:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.787841796875	2	441.786579	881.558604	-0.54459	-0.00024059	3.5319	0.0015603	2.9873	0.0013197	441.7881167581505	37.981	2.8453	38.294	37.083	39.929	0.31312					193	69	5	0	0	0	0.7932	1	3164	3164		25.45	0	1	61531000	+		53070	24648	35420	35433	60109	60109					0.11308733942325944
SALRCGARRVF	11	Unmodified	_SALRCGARRVF_					0	0	0		ENSG00000188641|ENST00000370192|DPYD	ENSG00000188641|ENST00000370192|DPYD	ENSG00000188641|ENST00000370192|DPYD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.3458862304688	2	618.343123	1234.67169	0.89263	0.00055195	3.6134	0.0022343	4.506	0.0027863	618.3452359789501	97.829	3.1632	97.989	96.92	100.08	0.16073					214	73	4	0	0	0	0.69995	1	10083	10083		31.53	5.9558	1	874220			53071	7944	35421	35434	60110	60110					0.06374479116561815
SALRRDVQ	8	Unmodified	_SALRRDVQ_					0	0	0		nc|ENSG00000125510|P41146-2|OPRL1;ENSG00000125510|ENST00000336866|OPRL1	nc|ENSG00000125510|P41146-2|OPRL1	nc|ENSG00000125510|P41146-2|OPRL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7673645019531	2	472.76724	943.519927	-0.5652	-0.00026721	0.45292	0.00021413	-0.11228	-5.3082E-05	472.76729274425634	81.448	2.2568	81.505	80.558	82.815	0.057816					110	51	3	0	0	0	0.88185	1	8059	8059		32.812	0	1	178400			53072	3395	35422	35435	60111	60111					0.04590821360523023
SALRRPGRPP	10	Unmodified	_SALRRPGRPP_					0	0	0			REV__ENST00000434837.7_1_6:37664592-37664970:-|nuORF	REV__ENST00000434837.7_1_6:37664592-37664970:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.830078125	2	553.830706	1105.64686	-1.4375	-0.00079614	0.20667	0.00011446	-1.2308	-0.00068168	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.86348	1	8813	8813		31.53	1.2121	1	1728300	+		53073	26671	35423	35436	60112	60112					0.09826167305527633
SALSPLLLI	9	Unmodified	_SALSPLLLI_					0	0	0			REV__ENST00000489097.5_1_1:6527238-6527559:-|nuORF	REV__ENST00000489097.5_1_1:6527238-6527559:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.7991638183594	2	463.799686	925.584819	-0.080206	-3.7199E-05	1.9522	0.00090541	1.8719	0.00086821	463.80040731335265	41.41	1.3196	41.365	40.954	42.273	-0.045467					80	38	3	0	0	0	0.7932	1	2765	2765		17.365	0	1	417210	+		53074	27614	35424	35437	60113	60113					0.11905003113827206
SALTTRLL	8	Unmodified	_SALTTRLL_					0	0	0		ENST00000216068.8_1_22:39174586-39174781:-|nuORF	ENST00000216068.8_1_22:39174586-39174781:-|nuORF	ENST00000216068.8_1_22:39174586-39174781:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.77056884765625	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.8347	1	2233	2233		23.042	2.0956	1	1151500			53075	9127	35425	35438	60114	60114					0.08654375277149029
SALVKFIEALS	11	Unmodified	_SALVKFIEALS_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3431396484375	2	589.344989	1176.67542	-1.324	-0.00078029	-2.4688	-0.001455	-3.7928	-0.0022353	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.72739	1	9172	9172		27.047	1.9213	1	5946500	+		53076	23202	35426	35439	60115	60115					0.09415427371436635
SALVLGPLI	9	Unmodified	_SALVLGPLI_					0	0	0			REV__ENSG00000198837|ENST00000361217|DENND4B	REV__ENSG00000198837|ENST00000361217|DENND4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7878112792969	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.7932	1	3566	3566		19.36	0	1	493390	+		53077	23392	35427	35440	60116	60116					0.11308733942325944
SALVNRHC	8	Unmodified	_SALVNRHC_					0	0	0			REV__ENSG00000175946|ENST00000684634|KLHL38	REV__ENSG00000175946|ENST00000684634|KLHL38	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2743225097656	2	450.229436	898.44432	-1.7764	-0.00079979	0.65149	0.00029332	-1.1249	-0.00050647	450.229701647782	92.895	0.41529	93.088	92.692	93.107	0.19239					12	9	2	0	0	0	0.4196	1	9345	9345		30.504	10.022	1	43816	+		53078	22094	35428	35441	60117	60117					-0.008964790914092191
SALVTKTN	8	Unmodified	_SALVTKTN_					0	0	0		nc|ENSG00000152822|Q13255-2|GRM1;chr6:146399699-146426559|15|12.13|0.39|4.95|+|ENST00000507907|GRM1,GRM1;nc|ENSG00000152822|Q13255-3|GRM1;ENSG00000152822|ENST00000282753|GRM1;nc|ENSG00000168959|P41594-3|GRM5;nc|ENSG00000168959|P41594-2|GRM5;ENSG00000168959|ENST00000305447|GRM5	nc|ENSG00000152822|Q13255-2|GRM1	nc|ENSG00000152822|Q13255-2|GRM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.23931884765625	2	417.239993	832.465432	-0.18702	-7.8031E-05	-1.9097	-0.00079681	-2.0967	-0.00087484	417.23903257482436	88.499	3.1931	88.567	87.962	91.155	0.068161					142	75	3	0	0	0	0.89679	1	8994	8994		37.812	6.2817	1	1475100			53079	469	35429	35442	60118	60118					0.042498094890902394
SALVVICPSL	10	Unmodified	_SALVVICPSL_					0	0	0		chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2905578613281	2	501.288628	1000.5627	1.1291	0.00056599	2.4986	0.0012525	3.6277	0.0018185	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.80179	1	9076	9076		39.253	5.0803	1	9883700			53080	230	35430	35443	60119	60119					0.06244455373735036
SALVVICPSL	10	Unmodified	_SALVVICPSL_					0	0	0		chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2904052734375	2	501.288628	1000.5627	-0.50775	-0.00025453	3.985	0.0019976	3.4772	0.0017431	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.67571	1	8164	8164		45.972	5.1941	1	3014100			53081	230	35430	35443	60120	60120					0.06244455373735036
SALVVICPSL	10	Unmodified	_SALVVICPSL_					0	0	0		chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.29034423828125	2	501.288628	1000.5627	-0.50311	-0.0002522	4.0857	0.0020481	3.5826	0.0017959	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.67571	3	8548	8416;8452;8548		45.972	6.7194	1	10459000			53082	230	35430	35443	60121;60122;60123	60123					0.06244455373735036
SALVVICPSL	10	Unmodified	_SALVVICPSL_					0	0	0		chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904052734375	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.82886	1	8546	8546		37.812	0.65241	1	9566900			53083	230	35430	35443	60124	60124					0.06244455373735036
SALVVICPSL	10	Unmodified	_SALVVICPSL_					0	0	0		chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	chr17:44040256-44053414|14|29.79|0.43|6.1|-|1|TE_info:L2c,L2c_dup125099,L2,LINE,donor,+,44053414,44053560|LSM12,None|5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2905578613281	2	501.288628	1000.5627	-0.45424	-0.0002277	3.9764	0.0019933	3.5222	0.0017656	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.67571	1	10002	10002		45.972	13.16	1	9727400			53084	230	35430	35443	60125	60125					0.06244455373735036
SAMGSRYISF	10	Unmodified	_SAMGSRYISF_					0	0	0		ENST00000510515.5_1_4:77936087-77936168:+|nuORF	ENST00000510515.5_1_4:77936087-77936168:+|nuORF	ENST00000510515.5_1_4:77936087-77936168:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.2698364257812	2	559.768591	1117.52263	0.5211	0.00029169	-1.5048	-0.00084231	-0.98366	-0.00055062	560.2694113681365	49.108	0.72747	50.013	49.686	50.413	0.90424					30	17	2	0	0	0	0.60985	1	4804	4804		49.536	3.5841	1	684970			53085	13008	35431	35444	60126	60126					-0.03143091296851708
SAPASAWPL	9	Unmodified	_SAPASAWPL_					0	0	0		ENST00000358744.3_1_19:38077586-38085658:-|nuORF	ENST00000358744.3_1_19:38077586-38085658:-|nuORF	ENST00000358744.3_1_19:38077586-38085658:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2744140625	2	450.23471	898.454868	0.68252	0.0003073	-1.2746	-0.00057386	-0.59206	-0.00026656	450.2342377177858	92.941	0.369	93.1	92.751	93.12	0.15875					16	8	3	0	0	0	0.20789	1	9397	9397		23.042	0	1	216540			53086	10416	35432	35445	60127	60127					0.001578268346634104
SAPGCSPLAR	10	Unmodified	_SAPGCSPLAR_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.742431640625	2	479.742376	957.4702	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.286	1	29.243	28.743	29.743	-0.043095								0	0	0	0.45132	1	1525	1525		36.447	5.9431	1		+		53087	21984	35433	35446	60128	60128					-0.010236296398147715
SAPPGYTL	8	Unmodified	_SAPPGYTL_					0	0	0		nc|ENSG00000168502|Q9Y4B5-4|MTCL1;nc|ENSG00000168502|Q9Y4B5-2|MTCL1;nc|ENSG00000168502|Q9Y4B5-3|MTCL1;nc|ENSG00000168502|Q9Y4B5|MTCL1;ENSG00000168502|ENST00000695636|MTCL1	nc|ENSG00000168502|Q9Y4B5-4|MTCL1	nc|ENSG00000168502|Q9Y4B5-4|MTCL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2088928222656	2	403.208161	804.401769	-0.18721	-7.5483E-05	2.1853	0.00088112	1.9981	0.00080563	403.20895430476565	85.948	2.3712	86.015	85.029	87.4	0.067268					117	54	4	0	0	0	0.85277	1	8659	8659		25.45	3.7478	1	1482400			53088	6407	35434	35447	60129	60129					-0.008255509480022738
SAPPGYTL	8	Unmodified	_SAPPGYTL_					0	0	0		nc|ENSG00000168502|Q9Y4B5-4|MTCL1;nc|ENSG00000168502|Q9Y4B5-2|MTCL1;nc|ENSG00000168502|Q9Y4B5-3|MTCL1;nc|ENSG00000168502|Q9Y4B5|MTCL1;ENSG00000168502|ENST00000695636|MTCL1	nc|ENSG00000168502|Q9Y4B5-4|MTCL1	nc|ENSG00000168502|Q9Y4B5-4|MTCL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2088623046875	2	403.208161	804.401769	0.59952	0.00024173	1.3797	0.00055629	1.9792	0.00079802	403.20865750603866	85.732	1.8224	85.881	85.428	87.25	0.14857					100	42	4	0	0	0	0.87922	1	8441	8441		31.955	6.5047	1	1321000			53089	6407	35434	35447	60130	60130					-0.008255509480022738
SAPPVVRR	8	Unmodified	_SAPPVVRR_					0	0	0			REV__nc|ENSG00000124812|P54107-2|CRISP1	REV__nc|ENSG00000124812|P54107-2|CRISP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.2683410644531	2	441.269419	880.524284	-1.4055	-0.00062019	1.6116	0.00071114	0.2061	9.0946E-05	441.2699746440924	102.08	1.2621	102.27	101.76	103.02	0.19484					69	30	3	0	0	0	0.84341	1	10744	10744		24.203	2.5004	1	596870	+		53090	18616	35435	35448	60131	60131					0.07924330574087435
SAPQDRTSF	9	Unmodified	_SAPQDRTSF_					0	0	0			REV__ENSG00000145860|ENST00000424310|RNF145	REV__ENSG00000145860|ENST00000424310|RNF145	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.2098693847656	2	504.740888	1007.46722	-0.4596	-0.00023198	-0.62681	-0.00031638	-1.0864	-0.00054835	505.24006765447206	80.761	0.90822	81.182	80.679	81.588	0.42149					26	21	2	0	0	0	0.18021	1	9312	9312		96.19	0	1	174240	+		53091	19972	35436	35449	60132	60132					-0.03621181492940195
SAPRKKLSD	9	Unmodified	_SAPRKKLSD_					0	0	0			REV__ENSG00000273079|ENST00000609686|GRIN2B	REV__ENSG00000273079|ENST00000609686|GRIN2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2906494140625	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.69624	1	9073	9073		40.778	8.8233	1	9565500	+		53092	23989	35437	35450	60133	60133					0.06628261191792717
SAPTQQVQ	8	Unmodified	_SAPTQQVQ_					0	0	0			REV__ENST00000472019.5_1_2:220147533-220150716:+|nuORF	REV__ENST00000472019.5_1_2:220147533-220150716:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	429.2355041503906	2	429.719424	857.424296	-0.17806	-7.6516E-05	4.4581	0.0019157	4.28	0.0018392	429.7213061838579	63.388	0.081936	63.383	63.337	63.419	-0.0055504					5	4	2	0	0	0	0.4196	1	5887	5887		27.882	7.8855	1	14894	+		53093	19270	35438	35451	60134	60134					-0.010119515503788534
SAPWFVGCKIK	11	Unmodified	_SAPWFVGCKIK_					0	0	0		ENST00000558133.1_1_15:82335503-82336997:-|nuORF	ENST00000558133.1_1_15:82335503-82336997:-|nuORF	ENST00000558133.1_1_15:82335503-82336997:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.8076782226562	2	618.333901	1234.65325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.126	1	67.09	66.59	67.59	-0.035698								0	0	0	0.56276	1	6436	6436		24.519	0	1				53094	13786	35439	35452	60135	60135					0.045309244219879474
SAQIVVLTGFV	11	Unmodified	_SAQIVVLTGFV_					0	0	0		nc|ENSG00000154258|Q8IUA7-4|ABCA9;nc|ENSG00000154258|Q8IUA7-3|ABCA9;ENSG00000154258|ENST00000340001|ABCA9;ENST00000461623.1_1_17:67029858-67045457:-|nuORF	nc|ENSG00000154258|Q8IUA7-4|ABCA9	nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3302001953125	2	567.331882	1132.64921	1.2029	0.00068247	-3.4414	-0.0019524	-2.2385	-0.00127	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.72106	1	10707	10707		28.081	3.5623	1	4990000			53095	5267	35440	35453	60136	60136					0.08819158199935373
SAQIVVLTGFV	11	Unmodified	_SAQIVVLTGFV_					0	0	0		nc|ENSG00000154258|Q8IUA7-4|ABCA9;nc|ENSG00000154258|Q8IUA7-3|ABCA9;ENSG00000154258|ENST00000340001|ABCA9;ENST00000461623.1_1_17:67029858-67045457:-|nuORF	nc|ENSG00000154258|Q8IUA7-4|ABCA9	nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3296508789062	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.69931	1	11087	11087		31.634	0.10446	1	6007000			53096	5267	35440	35453	60137	60137					0.08819158199935373
SAQKRKCHLIK	11	Unmodified	_SAQKRKCHLIK_					0	0	0		ENST00000338564.9_1_15:37393130-37393349:-|nuORF	ENST00000338564.9_1_15:37393130-37393349:-|nuORF	ENST00000338564.9_1_15:37393130-37393349:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2630615234375	3	437.927446	1310.76051	0.23602	0.00010336	1.9985	0.00087521	2.2345	0.00097857	438.2630794988371	45.346	1.3309	45.389	44.445	45.776	0.042599					44	32	2	0	0	0	0.77205	1	3138	3138		17.167	0.63689	1	183310			53097	10205	35441	35454	60138	60138					0.11755894356247154
SAQRTTTPPMA	11	Unmodified	_SAQRTTTPPMA_					0	0	0			REV__ENST00000418929.6_1_19:50096591-50097779:+|nuORF	REV__ENST00000418929.6_1_19:50096591-50097779:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.7909545898438	2	580.790055	1159.56556	-0.54253	-0.00031509	1.4449	0.00083921	0.90242	0.00052412	580.7907032507866	19.861	1.1389	19.232	18.937	20.076	-0.62961					54	24	3	0	0	0	0.68532	1	586	586		33.922	2.3918	1	347400	+		53098	26468	35442	35455	60139	60139					-0.007843212394163857
SAQRTTTPPMA	11	Unmodified	_SAQRTTTPPMA_					0	0	0			REV__ENST00000418929.6_1_19:50096591-50097779:+|nuORF	REV__ENST00000418929.6_1_19:50096591-50097779:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	580.790055	1159.56556	-1.4955	-0.00086855	1.6208	0.00094135	0.12534	7.2794E-05	580.7910671044915	18.873	0.22654	18.873	18.76	18.987	0	-0.10024	0.001033	NaN	33.922	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18904	+		53099	26468	35442	35455							-0.007843212394163857
SAQRTTTPPMA	11	Unmodified	_SAQRTTTPPMA_					0	0	0			REV__ENST00000418929.6_1_19:50096591-50097779:+|nuORF	REV__ENST00000418929.6_1_19:50096591-50097779:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	580.790055	1159.56556	0.54889	0.00031879	0.085865	4.9869E-05	0.63475	0.00036866	580.7899286009226	18.852	0.70232	18.896	18.79	19.492	0.043747	-0.077968	-0.00074992	NaN	33.922	43	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	227390	+		53100	26468	35442	35455							-0.007843212394163857
SAQRTTTPPMA	11	Unmodified	_SAQRTTTPPMA_					0	0	0			REV__ENST00000418929.6_1_19:50096591-50097779:+|nuORF	REV__ENST00000418929.6_1_19:50096591-50097779:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	580.790055	1159.56556	0.16009	9.2979E-05	0.32266	0.0001874	0.48275	0.00028037	580.790149901527	18.77	0.63711	18.836	18.713	19.35	0.066296	-0.13771	-0.00047487	NaN	33.922	52	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252250	+		53101	26468	35442	35455							-0.007843212394163857
SAQRTTTPPMA	11	Unmodified	_SAQRTTTPPMA_					0	0	0			REV__ENST00000418929.6_1_19:50096591-50097779:+|nuORF	REV__ENST00000418929.6_1_19:50096591-50097779:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	580.790055	1159.56556	1.033	0.00059997	-0.75425	-0.00043806	0.27878	0.00016191	580.7894374308435	18.765	0.46917	18.741	18.64	19.109	-0.024035	-0.23254	-0.0017258	NaN	33.922	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141090	+		53102	26468	35442	35455							-0.007843212394163857
SARAPWVG	8	Unmodified	_SARAPWVG_					0	0	0			REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2281188964844	2	422.22722	842.439886	-1.5227	-0.00064292	3.5197	0.0014861	1.997	0.00084319	422.2286072039903	64.658	1.0335	64.658	64.292	65.325	0					111	47	3	0	0	0	0.8621	1	5731	5731		26.693	1.2427	1	501820	+		53103	15513	35443	35456	60140	60140					0.012363797573243573
SARAPWVG	8	Unmodified	_SARAPWVG_					0	0	0			REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2284851074219	2	422.22722	842.439886	-0.188	-7.9378E-05	2.0882	0.00088171	1.9002	0.00080234	422.22800326383765	64.571	1.1453	64.57	64.134	65.279	-0.00078583					74	34	3	0	0	0	0.87922	1	6046	6046		31.955	6.5047	1	496030	+		53104	15513	35443	35456	60141	60141					0.012363797573243573
SARAPWVG	8	Unmodified	_SARAPWVG_					0	0	0			REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.22772216796875	2	422.22722	842.439886	1.4046	0.00059308	0.57845	0.00024424	1.9831	0.00083732	422.2272983859282	64.331	2.0044	64.358	63.19	65.195	0.027138					107	65	3	0	0	0	0.8621	1	6074	6074		26.693	2.4902	1	528250	+		53105	15513	35443	35456	60142	60142					0.012363797573243573
SARAPWVG	8	Unmodified	_SARAPWVG_					0	0	0			REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.22735595703125	2	422.22722	842.439886	-1.8003	-0.00076015	3.6324	0.0015337	1.8321	0.00077356	422.2286994830419	63.649	0.63203	63.769	63.398	64.03	0.12004					57	31	2	0	0	0	0.86677	1	5604	5604		27.882	2.4321	1	224330	+		53106	15513	35443	35456	60143	60143					0.012363797573243573
SARAPWVG	8	Unmodified	_SARAPWVG_					0	0	0			REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2276916503906	2	422.22722	842.439886	-1.7987	-0.00075945	3.6985	0.0015616	1.8999	0.00080217	422.2287015198112	64.24	0.93478	64.36	64.014	64.949	0.12005					82	33	3	0	0	0	0.82658	2	5673	5673;5684		24.203	2.5999	1	614800	+		53107	15513	35443	35456	60144;60145	60144					0.012363797573243573
SARAPWVG	8	Unmodified	_SARAPWVG_					0	0	0			REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	REV__chr12:110934686-110936612|32|30.66|0.0|21.55|+|0|LINC01405,LINC01405|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2281494140625	2	422.22722	842.439886	-1.0391	-0.00043872	2.9759	0.0012565	1.9369	0.0008178	422.2283416890696	64.395	1.1539	64.425	64.021	65.175	0.030243					96	39	3	0	0	0	0.87064	2	5660	5660;5669		29.15	2.3535	1	492400	+		53108	15513	35443	35456	60146;60147	60146					0.012363797573243573
SARAWLPG	8	Unmodified	_SARAWLPG_					0	0	0		ENST00000523737.5_1_5:179271222-179285842:-|nuORF;ENST00000292586.10_1_5:179275058-179285842:-|nuORF;ENST00000520150.5_1_5:179268915-179285842:-|nuORF;nc|ENSG00000161010|Q6NTE8-2|MRNIP	ENST00000523737.5_1_5:179271222-179285842:-|nuORF	ENST00000523737.5_1_5:179271222-179285842:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.2357177734375	2	429.235045	856.455536	0.92962	0.00039903	0.55362	0.00023763	1.4832	0.00063666	429.2351427168519	63.189	2.3191	63.218	62.635	64.954	0.028133					251	82	4	0	0	0	0.86288	1	5935	5935		26.796	0	1	5799800			53109	9692	35444	35457	60148	60148					0.02156666274379404
SARELVTLA	9	Unmodified	_SARELVTLA_					0	0	0			REV__ENSG00000103326|ENST00000219611|CAPN15	REV__ENSG00000103326|ENST00000219611|CAPN15	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.2796936035156	2	480.279649	958.544745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.425	1	26.471	25.971	26.971	0.045507								0	0	0	0.30613	1	1118	1118		42.396	8.2236	1		+		53110	17404	35445	35458	60149	60149					0.063814564432505
SARPKSITK	9	Unmodified	_SARPKSITK_					0	0	0			REV__ENSG00000138035|ENST00000447944|PNPT1;REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	REV__ENSG00000138035|ENST00000447944|PNPT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3007507324219	2	494.300916	986.587279	2.3073	0.0011405	-2.72	-0.0013445	-0.41277	-0.00020403	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.69624	1	10690	10690		40.778	3.6191	1	53958000	+		53111	19431;24369	35446	35459	60150	60150					0.09344851571472645
SARPKSITK	9	Unmodified	_SARPKSITK_					0	0	0			REV__ENSG00000138035|ENST00000447944|PNPT1;REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	REV__ENSG00000138035|ENST00000447944|PNPT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3009948730469	2	494.300916	986.587279	-0.67103	-0.00033169	0.2629	0.00012995	-0.40813	-0.00020174	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.74721	2	10609	10609;10625		37.159	4.4919	1	54981000	+		53112	19431;24369	35446	35459	60151;60152	60151					0.09344851571472645
SARPKSITK	9	Unmodified	_SARPKSITK_					0	0	0			REV__ENSG00000138035|ENST00000447944|PNPT1;REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	REV__ENSG00000138035|ENST00000447944|PNPT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3003845214844	2	494.300916	986.587279	-0.58165	-0.00028751	0.50872	0.00025146	-0.072933	-3.6051E-05	494.30110008283356	100.79	1.5343	100.99	100.36	101.9	0.2058					82	36	3	0	0	0	0.77244	1	10564	10564		32.812	2.3088	1	820880	+		53113	19431;24369	35446	35459	60153	60153					0.09344851571472645
SARPKSITK	9	Unmodified	_SARPKSITK_					0	0	0			REV__ENSG00000138035|ENST00000447944|PNPT1;REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	REV__ENSG00000138035|ENST00000447944|PNPT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.3009033203125	2	494.300916	986.587279	1.003	0.00049577	-1.194	-0.00059017	-0.19099	-9.4404E-05	494.3002402240543	96.954	3.9557	97.359	96.674	100.63	0.40498					299	97	6	0	0	0	0.67345	1	11717	11717		42.396	4.5846	1	25258000	+		53114	19431;24369	35446	35459	60154	60154					0.09344851571472645
SARPKSITK	9	Unmodified	_SARPKSITK_					0	0	0			REV__ENSG00000138035|ENST00000447944|PNPT1;REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	REV__ENSG00000138035|ENST00000447944|PNPT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.30078125	2	494.300916	986.587279	0.88078	0.00043537	-1.0905	-0.00053901	-0.20967	-0.00010364	494.3002880194073	97.072	3.8769	97.462	96.82	100.7	0.39066					309	95	6	0	0	0	0.75725	1	11658	11658		36.447	2.2742	1	27149000	+		53115	19431;24369	35446	35459	60155	60155					0.09344851571472645
SARSGTLRSLL	11	Unmodified	_SARSGTLRSLL_					0	0	0			REV__ENSG00000110108|ENST00000227525|TMEM109	REV__ENSG00000110108|ENST00000227525|TMEM109	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.8404541015625	2	580.840936	1159.66732	0.64192	0.00037286	-1.292	-0.00075042	-0.65003	-0.00037757	580.8399997377094	69.658	0.88029	69.793	69.47	70.351	0.13506					122	43	4	0	0	0	0.75544	1	6305	6305		20.837	0.84038	1	14396000	+		53116	17798	35447	35460	60156	60156					0.09387293174654587
SARVRAGGGG	10	Unmodified	_SARVRAGGGG_					0	0	0		ENST00000597578.1_1_16:86524040-86542451:-|nuORF	ENST00000597578.1_1_16:86524040-86542451:-|nuORF	ENST00000597578.1_1_16:86524040-86542451:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	443.94842529296875	2	444.243932	886.473312	0.74598	0.0003314	2.963	0.0013163	3.709	0.0016477	444.2451370884295	107.15	0.97893	107.24	106.82	107.8	0.091255					74	23	4	0	0	0	0.37624	1	11485	11485		26.693	0	1	2140200			53117	14359	35448	35461	60157	60157					0.02553381529253329
SARWPVAG	8	Unmodified	_SARWPVAG_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.22735595703125	2	422.22722	842.439886	-0.032306	-1.364E-05	1.3396	0.00056562	1.3073	0.00055198	422.2276832627875	61.725	1.2193	61.692	61.376	62.595	-0.033173					71	53	2	0	0	0	0.87064	1	5820	5820		29.15	0	1	435140			53118	8866	35449	35462	60158	60158					0.012363797573243573
SASGRGLLP	9	Unmodified	_SASGRGLLP_					0	0	0		ENSG00000069399|ENST00000164227|BCL3;ENST00000403534.7_1_19:45250964-45261799:+|nuORF	ENSG00000069399|ENST00000164227|BCL3	ENSG00000069399|ENST00000164227|BCL3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.2357177734375	2	429.245609	856.476666	0.39464	0.0001694	0.96661	0.00041491	1.3613	0.00058431	429.2450517924779	63.128	0.16394	63.25	63.17	63.334	0.12252					8	6	2	0	0	0	0.20789	1	5528	5528		35.618	18.253	1	54401			53119	1219	35450	35463	60159	60159					0.042686315832384025
SASGSENNT	9	Unmodified	_SASGSENNT_					0	0	0		ENST00000478307.5_1_1:147400580-147440603:+|nuORF	ENST00000478307.5_1_1:147400580-147440603:+|nuORF	ENST00000478307.5_1_1:147400580-147440603:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.28582763671875	2	433.677953	865.341354	-1.6354	-0.00070924	-4.2521	-0.001844	-5.8875	-0.0025533	433.6744179346171	56.082	0.10532	56.145	56.051	56.157	0.063725					5	4	2	0	0	0	0.20789	1	4716	4716		19.997	0	1	28570			53120	12386	35451	35464	60160	60160					-0.09670313069034364
SASINNLKPGT	11	Unmodified	_SASINNLKPGT_					0	0	0		nc|ENSG00000135333|Q15375-2|EPHA7;nc|ENSG00000135333|Q15375-4|EPHA7;ENSG00000135333|ENST00000369303|EPHA7	nc|ENSG00000135333|Q15375-2|EPHA7	nc|ENSG00000135333|Q15375-2|EPHA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.2984008789062	2	551.29857	1100.58259	0.40018	0.00022062	-1.0242	-0.00056465	-0.62404	-0.00034403	551.297831017305	31.917	0.96489	31.91	31.385	32.35	-0.0061474					28	22	2	0	0	0	0.69071	1	1771	1771		33.039	0.22698	1	68431			53121	4006	35452	35465	60161	60161					0.03631922638055585
SASKAFVCA	9	Unmodified	_SASKAFVCA_					0	0	0		ENST00000464104.5_1_9:98997744-99012284:-|nuORF;nc|ENSG00000130948|P37058-2|HSD17B3;ENSG00000130948|ENST00000375263|HSD17B3;ENST00000494814.5_1_9:99003185-99007692:-|nuORF	ENST00000464104.5_1_9:98997744-99012284:-|nuORF	ENST00000464104.5_1_9:98997744-99012284:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7879638671875	2	442.220746	882.426938	-0.51245	-0.00022662	-1.3794	-0.00061002	-1.8919	-0.00083663	442.220026488745	39.184	0.49441	39.195	38.893	39.387	0.011173					15	11	2	0	0	0	0.20789	1	2730	2730		31.955	6.5047	1	37609			53122	3699	35453	35466	60162	60162					-0.018978194170813367
SASKTKTK	8	Unmodified	_SASKTKTK_					0	0	0		nc|ENSG00000276293|P78356-2|PIP4K2B;ENSG00000276293|ENST00000619039|PIP4K2B	nc|ENSG00000276293|P78356-2|PIP4K2B	nc|ENSG00000276293|P78356-2|PIP4K2B	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	425.77484130859375	2	425.753267	849.491981	-1.8992	-0.00080861	-3.3069	-0.0014079	-5.2061	-0.0022165	425.75164690166855	38.838	0.30262	38.838	38.597	38.9	0					10	6	2	0	0	0	0.4196	1	2413	2413		13.775	10.616	1	52986			53123	9013	35454	35467	60163	60163					0.06121498380412049
SASLVTRQ	8	Unmodified	_SASLVTRQ_					0	0	0		ENSG00000135090|ENST00000392533|TAOK3	ENSG00000135090|ENST00000392533|TAOK3	ENSG00000135090|ENST00000392533|TAOK3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.51300048828125	2	431.243067	860.47158	0.70848	0.00030553	-0.44568	-0.0001922	0.2628	0.00011333	431.24272276855567	22.333	0.49067	21.914	21.652	22.143	-0.41879					18	10	3	0	0	0	0.4196	1	874	874		17.365	0.89182	1	43270			53124	3981	35455	35468	60164	60164					0.03576327720611516
SASNKLLS	8	Unmodified	_SASNKLLS_					0	0	0			REV__ENSG00000177483|ENST00000316997|RBM44	REV__ENSG00000177483|ENST00000316997|RBM44	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.2921447753906	2	410.232168	818.449782	0.4848	0.00019888	-0.15713	-6.446E-05	0.32767	0.00013442	410.23197950459894	22.847	0.39932	22.237	22.031	22.43	-0.6107					16	9	3	0	0	0	0.4196	1	941	941		7.1934	0	1	93357	+		53125	22209	35456	35469	60165	60165					0.0332952297205793
SASPWALAVEV	11	Unmodified	_SASPWALAVEV_					0	0	0			REV__chr1:162791700-162792659|28|12.68|0.28|5.49|+|2|None,HSD17B7|2	REV__chr1:162791700-162792659|28|12.68|0.28|5.49|+|2|None,HSD17B7|2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	565.3628540039062	2	565.298039	1128.58152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.23	1	114.16	113.66	114.66	-0.07								0	0	0	0.56276	1	12359	12359		14.137	1.3254	1		+		53126	15422	35457	35470	60166	60166					0.02237708269126415
SASQADWRQ	9	Unmodified	_SASQADWRQ_					0	0	0		nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A	nc|ENSG00000183873|Q14524-3|SCN5A	nc|ENSG00000183873|Q14524-3|SCN5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.7725830078125	2	524.743962	1047.47337	0.69249	0.00036338	-0.73485	-0.00038561	-0.042352	-2.2224E-05	524.743544278018	24.742	0.77218	24.792	24.47	25.242	0.050451					35	23	2	0	0	0	0.64555	1	965	965		44.377	5.571	1	32886			53127	7570	35458	35471	60167	60167					-0.048466632614236005
SASRPVRP	8	Unmodified	_SASRPVRP_					0	0	0			REV__ENSG00000165970|ENST00000525748|SLC6A5	REV__ENSG00000165970|ENST00000525748|SLC6A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2519836425781	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87064	1	8192	8192		29.15	0.89528	1	3370400	+		53128	21237	35459	35472	60168	60168					0.04839453677379879
SASSDSTGK	9	Unmodified	_SASSDSTGK_					0	0	0		nc|ENSG00000204961|Q9Y5H5-2|PCDHA9;ENSG00000204961|ENST00000532602|PCDHA9	nc|ENSG00000204961|Q9Y5H5-2|PCDHA9	nc|ENSG00000204961|Q9Y5H5-2|PCDHA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.19085693359375	2	420.190697	838.36684	-0.017504	-7.3551E-06	1.6934	0.00071157	1.6759	0.00070422	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.78536	1	11083	11083		29.15	6.1071	1	4147200			53129	8502	35460	35473	60169	60169					-0.058808385466136315
SASSSPPPK	9	Unmodified	_SASSSPPPK_					0	0	0			REV__ENSG00000117713|ENST00000324856|ARID1A	REV__ENSG00000117713|ENST00000324856|ARID1A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	429.23541259765625	2	429.2218	856.429047	0.92594	0.00039743	-0.45118	-0.00019366	0.47476	0.00020378	429.22165985574793	63.14	0.094341	63.168	63.097	63.191	0.028133					5	4	2	0	0	0	0.20789	1	5900	5900		25.574	3.8717	1	32257	+		53130	18279	35461	35474	60170	60170					-0.004910674076086252
SASVLTVRREP	11	Unmodified	_SASVLTVRREP_					0	0	0		ENSG00000114270|ENST00000681320|COL7A1;nc|ENSG00000114270|Q02388-2|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5658264160156	3	405.566571	1213.67788	-1.5858	-0.00064316	-3.0129	-0.0012219	-4.5987	-0.0018651	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.74771	1	5347	5347		22.562	2.2466	1	181560			53131	2764	35462	35475	60171	60171					0.07959275829102808
SASVRWAV	8	Unmodified	_SASVRWAV_					0	0	0		ENSG00000255690|ENST00000539664|TRIL	ENSG00000255690|ENST00000539664|TRIL	ENSG00000255690|ENST00000539664|TRIL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2635803222656	2	438.240327	874.466101	1.6768	0.00073482	-4.2378	-0.0018572	-2.5611	-0.0011224	438.2384740999846	35.8	0.41551	36.241	36.036	36.451	0.44043					18	10	2	0	0	0	0.4196	1	2785	2785		44.117	0	1	216730			53132	8889	35463	35476	60172	60172					0.023846489288075645
SATFAWSQESP	11	Unmodified	_SATFAWSQESP_					0	0	0		ENST00000574094.5_1_16:16275679-16317348:-|nuORF;nc|ENSG00000091262|O95255-3|ABCC6;ENSG00000091262|ENST00000205557|ABCC6	ENST00000574094.5_1_16:16275679-16317348:-|nuORF	ENST00000574094.5_1_16:16275679-16317348:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.7760620117188	2	605.772385	1209.53022	1.1109	0.00067294	2.9225	0.0017704	4.0334	0.0024433	605.7737986436906	67.189	0.98923	67.574	67.235	68.225	0.38515					66	27	4	0	0	0	0.62614	1	7372	7372		41.427	8.6761	1	2138800			53133	1674	35464	35477	60173	60173					-0.06616660495569704
SAVGTRQQKL	10	Unmodified	_SAVGTRQQKL_					0	0	0		nc|ENSG00000110422|Q9H422-2|HIPK3;ENSG00000110422|ENST00000303296|HIPK3	nc|ENSG00000110422|Q9H422-2|HIPK3	nc|ENSG00000110422|Q9H422-2|HIPK3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.3172607421875	2	544.314554	1086.61456	-1.687	-0.00091826	1.5647	0.00085171	-0.12228	-6.6558E-05	544.3152960234735	17.121	0.23308	17.121	16.972	17.205	0					21	10	3	0	0	0	0.86272	1	180	180		24.519	1.4767	1	94862			53134	2527	35465	35478	60174	60174					0.07471335111858934
SAVKVTTHSVL	11	Unmodified	_SAVKVTTHSVL_					0	0	0		ENSG00000166924|ENST00000300179|NYAP1;nc|ENSG00000166924|Q6ZVC0-2|NYAP1	ENSG00000166924|ENST00000300179|NYAP1	ENSG00000166924|ENST00000300179|NYAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3311767578125	2	571.332413	1140.65027	0.55864	0.00031917	-3.1127	-0.0017784	-2.554	-0.0014592	571.3306168800059	102.04	2.573	102.24	101.51	104.08	0.19484					133	63	4	0	0	0	0.64498	1	10798	10798		39.253	11.371	1	4021100			53135	6248	35466	35479	60175	60175					0.08557372568861865
SAVLAKSGT	9	Unmodified	_SAVLAKSGT_					0	0	0			REV__ENST00000560666.1_1_15:63618486-63624001:-|nuORF	REV__ENST00000560666.1_1_15:63618486-63624001:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.24017333984375	2	417.239993	832.465432	-1.1717	-0.00048886	-1.3676	-0.00057062	-2.5392	-0.0010595	417.23924184101116	88.678	1.8374	88.678	88.117	89.954	0					78	42	3	0	0	0	0.7932	1	8530	8530		23.523	1.8204	1	977120	+		53136	28765	35467	35480	60176	60176					0.04249809489101608
SAVLKDRVN	9	Unmodified	_SAVLKDRVN_					0	0	0		nc|ENSG00000169607|Q8IYA6-3|CKAP2L;ENSG00000169607|ENST00000302450|CKAP2L	nc|ENSG00000169607|Q8IYA6-3|CKAP2L	nc|ENSG00000169607|Q8IYA6-3|CKAP2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.290283203125	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.76764	1	8764	8764		34.173	0	1	9566900			53137	6511	35468	35481	60177	60177					0.06628261191792717
SAVLKLAEPYG	11	Unmodified	_SAVLKLAEPYG_					0	0	0		ENST00000415279.1_1_1:106435599-106436040:+|nuORF;nc|ENSG00000280987|P43243-2|MATR3;ENST00000502422.5_1_5:138651717-138665081:+|nuORF;ENSG00000015479|ENST00000394805|MATR3	ENST00000415279.1_1_1:106435599-106436040:+|nuORF	ENST00000415279.1_1_1:106435599-106436040:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3193359375	2	574.321514	1146.62847	-1.3729	-0.0007885	-2.1573	-0.001239	-3.5302	-0.0020275	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.67778	1	9609	9609		35.152	1.2304	1	1586900			53138	823	35469	35482	60178	60178					0.06102567820266813
SAVLLTLVCV	10	Unmodified	_SAVLLTLVCV_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.3057861328125	2	509.304278	1016.594	0.74223	0.00037802	2.3317	0.0011875	3.0739	0.0015656	509.305324720209	92.968	1.4156	93.127	92.667	94.082	0.15875					103	33	4	0	0	0	0.86589	1	9442	9442		29.15	1.2673	1	2131200	+		53139	20899	35470	35483	60179	60179					0.08637028407827074
SAVLMGILGI	10	Unmodified	_SAVLMGILGI_					0	0	0		ENST00000392253.2_1_2:202275976-202276645:-|nuORF	ENST00000392253.2_1_2:202275976-202276645:-|nuORF	ENST00000392253.2_1_2:202275976-202276645:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.29315185546875	2	487.291171	972.567789	1.5746	0.00076728	2.5881	0.0012611	4.1627	0.0020284	487.2923164445536	91.172	2.4399	91.105	90.562	93.002	-0.067093					137	58	3	0	0	0	0.84112	2	9566	9566;9625		37.159	1.5408	1	2352400			53140	11015	35471	35484	60180;60181	60180					0.08040759236359918
SAVLPEVE	8	Unmodified	_SAVLPEVE_					0	0	0		ENSG00000087152|ENST00000587097|ATXN7L3;nc|ENSG00000087152|Q14CW9-2|ATXN7L3	ENSG00000087152|ENST00000587097|ATXN7L3	ENSG00000087152|ENST00000587097|ATXN7L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2279968261719	2	422.226551	842.438549	-0.18805	-7.94E-05	3.6659	0.0015478	3.4778	0.0014684	422.2279917800992	63.929	0.72619	63.928	63.441	64.167	-0.00078583					51	28	3	0	0	0	0.87922	1	5972	5972		31.955	2.1133	1	195170			53141	1569	35472	35485	60182	60182					0.011027008779137759
SAVLQLPGRRP	11	Unmodified	_SAVLQLPGRRP_					0	0	0			REV__ENSG00000188897|ENST00000696174|unknown	REV__ENSG00000188897|ENST00000696174|unknown	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.3583374023438	2	597.359296	1192.70404	0.94282	0.0005632	-2.9089	-0.0017377	-1.9661	-0.0011744	597.3571269689473	100.1	2.8225	100.31	99.04	101.86	0.21512					167	67	4	0	0	0	0.69995	1	10420	10420		31.53	2.3598	1	2588300	+		53142	23042	35473	35486	60183	60183					0.11539589791209437
SAVLVRVDSAS	11	Unmodified	_SAVLVRVDSAS_					0	0	0		ENSG00000110076|ENST00000265459|NRXN2;nc|ENSG00000110076|Q9P2S2-2|NRXN2;nc|ENSG00000110076|P58401|NRXN2	ENSG00000110076|ENST00000265459|NRXN2	ENSG00000110076|ENST00000265459|NRXN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3062133789062	2	552.306395	1102.59824	-0.70613	-0.00039	0.73262	0.00040463	0.026487	1.4629E-05	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.66009	1	9709	9709		37.508	4.7576	1	1609500			53143	2508	35474	35487	60184	60184					0.05104209155092576
SAVLVRVDSAS	11	Unmodified	_SAVLVRVDSAS_					0	0	0		ENSG00000110076|ENST00000265459|NRXN2;nc|ENSG00000110076|Q9P2S2-2|NRXN2;nc|ENSG00000110076|P58401|NRXN2	ENSG00000110076|ENST00000265459|NRXN2	ENSG00000110076|ENST00000265459|NRXN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3063354492188	2	552.306395	1102.59824	2.2801	0.0012593	-2.1564	-0.001191	0.1237	6.8322E-05	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.67778	1	9944	9944		35.152	2.3396	1	1797400			53144	2508	35474	35487	60185	60185					0.05104209155092576
SAVPRELLEK	10	Unmodified	_SAVPRELLEK_					0	0	0		nc|ENSG00000172009|P52888-2|THOP1;ENSG00000172009|ENST00000307741|THOP1	nc|ENSG00000172009|P52888-2|THOP1	nc|ENSG00000172009|P52888-2|THOP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3312377929688	2	571.332413	1140.65027	0.55864	0.00031917	-3.1127	-0.0017784	-2.554	-0.0014592	571.3306168800059	102.04	2.573	102.24	101.51	104.08	0.19484					133	63	4	0	0	0	0.86348	1	10785	10785		31.53	8.0071	1	4021100			53145	6735	35475	35488	60186	60186					0.08557372568861865
SAVTGLSLH	9	Unmodified	_SAVTGLSLH_					0	0	0		ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7445373535156	2	442.745442	883.476331	-1.2184	-0.00053945	-0.16486	-7.2993E-05	-1.3833	-0.00061244	442.74523759961534	89.283	0.76672	89.754	89.476	90.243	0.47068					54	18	4	0	0	0	0.77546	1	10549	10549		31.955	0	1	4305700			53146	2513	35476	35489	60187	60187					0.02993211863383749
SAWALRTP	8	Unmodified	_SAWALRTP_					0	0	0			REV__ENST00000495165.5_1_1:177901892-177902386:-|nuORF	REV__ENST00000495165.5_1_1:177901892-177902386:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.2486572265625	2	451.248152	900.481751	-1.2852	-0.00057995	3.0375	0.0013707	1.7523	0.0007907	451.2493154558184	65.489	1.09	65.618	64.991	66.081	0.12995					90	51	3	0	0	0	0.86677	1	5796	5796		27.882	0	1	1216500	+		53147	27142	35477	35490	60188	60188					0.027529354458465605
SAWALRTP	8	Unmodified	_SAWALRTP_					0	0	0			REV__ENST00000495165.5_1_1:177901892-177902386:-|nuORF	REV__ENST00000495165.5_1_1:177901892-177902386:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.24676513671875	2	451.248152	900.481751	0.43681	0.00019711	1.3662	0.00061648	1.803	0.00081359	451.2486012382637	65.524	1.1913	65.65	65.09	66.281	0.12532					110	62	3	0	0	0	0.93786	1	5823	5823		53.351	0	1	1138900	+		53148	27142	35477	35490	60189	60189					0.027529354458465605
SAWLAPPPPSP	11	Unmodified	_SAWLAPPPPSP_					0	0	0		ENST00000517894.5_3_8:143530803-143545560:+|nuORF	ENST00000517894.5_3_8:143530803-143545560:+|nuORF	ENST00000517894.5_3_8:143530803-143545560:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3400268554688	2	560.295299	1118.57605	1.3866	0.0007769	-4.0907	-0.002292	-2.7041	-0.0015151	560.2936220721518	102.09	0.36982	102.13	101.89	102.26	0.043198					18	8	4	0	0	0	0.17551	1	11000	11000		45.972	1.5951	1	134330			53149	13110	35478	35491	60190	60190					0.021500294773204587
SAWLPGGR	8	Unmodified	_SAWLPGGR_					0	0	0		ENSG00000132510|ENST00000448097|KDM6B;nc|ENSG00000132510|O15054-1|KDM6B	ENSG00000132510|ENST00000448097|KDM6B	ENSG00000132510|ENST00000448097|KDM6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.22869873046875	2	422.22722	842.439886	-1.8139	-0.00076587	3.7149	0.0015685	1.9011	0.00080268	422.22869976881793	56.252	1.7834	56.323	54.854	56.638	0.071831					143	72	3	0	0	0	0.884	1	4739	4739		33.516	0	1	800100			53150	3803	35479	35492	60191	60191					0.01236379757335726
SAWLPGGR	8	Unmodified	_SAWLPGGR_					0	0	0		ENSG00000132510|ENST00000448097|KDM6B;nc|ENSG00000132510|O15054-1|KDM6B	ENSG00000132510|ENST00000448097|KDM6B	ENSG00000132510|ENST00000448097|KDM6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2264099121094	2	422.22722	842.439886	-0.93887	-0.00039642	2.144	0.00090525	1.2051	0.00050883	422.2280284167546	61.398	1.0667	61.414	61.239	62.306	0.015724					73	47	2	0	0	0	0.87922	1	5375	5375		31.955	0	1	807210			53151	3803	35479	35492	60192	60192					0.01236379757335726
SAYKILLKPS	10	Unmodified	_SAYKILLKPS_					0	0	0			REV__nc|ENSG00000225523|A0A0A0MT36|IGKV6D-21	REV__nc|ENSG00000225523|A0A0A0MT36|IGKV6D-21	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3414306640625	2	560.342249	1118.66995	-0.60038	-0.00033642	-2.9864	-0.0016734	-3.5868	-0.0020098	560.3405348095038	89.752	2.8802	89.752	87.726	90.606	0					163	66	4	0	0	0	0.82886	1	8608	8608		37.812	3.639	1	504890	+		53152	30176	35480	35493	60193	60193					0.11535748579603933
SCAPPGVWPSP	11	Unmodified	_SCAPPGVWPSP_					0	0	0		ENST00000296127.7_1_3:45000927-45017663:-|nuORF;ENST00000455235.5_3_3:44986732-45017663:-|nuORF	ENST00000296127.7_1_3:45000927-45017663:-|nuORF	ENST00000296127.7_1_3:45000927-45017663:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.196533203125	2	549.257859	1096.50117	-0.94883	-0.00052115	-2.737	-0.0015033	-3.6858	-0.0020245	549.2568254477507	26.902	0.22404	26.726	26.568	26.792	-0.17559					6	4	2	0	0	0	0.17551	1	1516	1516		23.523	0	1	39820			53153	9728	35481	35494	60194	60194					-0.043224763255466314
SCARACSL	8	Carbamidomethyl (C)	_SC(Carbamidomethyl (C))ARACSL_	SC(0.995)ARAC(0.005)SL		SC(23)ARAC(-23)SL		0	1	0			REV__ENST00000479677.6_1_17:19641536-19646703:-|nuORF	REV__ENST00000479677.6_1_17:19641536-19646703:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.1959533691406	2	434.194205	866.373857	0.3852	0.00016725	3.9403	0.0017108	4.3255	0.0018781	434.1957932808922	24.197	1.0569	23.815	23.365	24.422	-0.38178					47	23	3	0	0	0	0.79403	1	1165	1165		63.306	7.8021	2	980280	+		53154	27403	35482	35495	60195	60195	335				-0.06467520471380794
SCCKVFRLY	9	2 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))C(Carbamidomethyl (C))KVFRLY_	SC(1)C(1)KVFRLY		SC(61)C(61)KVFRLY		0	2	0		ENST00000258149.9_1_12:69235710-69235896:+|nuORF	ENST00000258149.9_1_12:69235710-69235896:+|nuORF	ENST00000258149.9_1_12:69235710-69235896:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	616.7985229492188	2	616.799368	1231.58418	-0.062797	-3.8733E-05	-0.59983	-0.00036997	-0.66262	-0.00040871	616.7987436689413	45.977	0.73335	45.959	45.66	46.393	-0.018585					37	17	3	0	0	0	0.35373	1	3656	3656		60.972	6.1956	1	259660			53155	9366	35483	35496	60196	60196	120;121				-0.02234482869198473
SCCKVFRLY	9	2 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))C(Carbamidomethyl (C))KVFRLY_					0	2	0		ENST00000258149.9_1_12:69235710-69235896:+|nuORF	ENST00000258149.9_1_12:69235710-69235896:+|nuORF	ENST00000258149.9_1_12:69235710-69235896:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	616.799368	1231.58418	-0.59333	-0.00036596	-0.50952	-0.00031427	-1.1028	-0.00068024	616.7990398801851	45.914	0.66407	45.909	45.577	46.241	-0.0041618	0.020463	-2.7833E-05	NaN	60.972	40	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	323000			53156	9366	35483	35496			120;121				-0.02234482869198473
SCCKVFRLY	9	2 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))C(Carbamidomethyl (C))KVFRLY_					0	2	0		ENST00000258149.9_1_12:69235710-69235896:+|nuORF	ENST00000258149.9_1_12:69235710-69235896:+|nuORF	ENST00000258149.9_1_12:69235710-69235896:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	616.799368	1231.58418	0.42118	0.00025978	-1.0535	-0.00064979	-0.6323	-0.00039	616.7987407526784	45.791	0.49396	45.833	45.602	46.096	0.042599	-0.055545	-0.00069887	NaN	60.972	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123810			53157	9366	35483	35496			120;121				-0.02234482869198473
SCCKVFRLY	9	2 Carbamidomethyl (C)	_SC(Carbamidomethyl (C))C(Carbamidomethyl (C))KVFRLY_					0	2	0		ENST00000258149.9_1_12:69235710-69235896:+|nuORF	ENST00000258149.9_1_12:69235710-69235896:+|nuORF	ENST00000258149.9_1_12:69235710-69235896:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	616.799368	1231.58418	0.263	0.00016222	-1.0127	-0.00062466	-0.74974	-0.00046244	616.7987891256661	45.899	0.43787	45.82	45.568	46.006	-0.079002	-0.068383	-0.00064861	NaN	60.972	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99714			53158	9366	35483	35496			120;121				-0.02234482869198473
SCDCSYGH	8	Unmodified	_SCDCSYGH_					0	0	0			REV__ENSG00000174469|ENST00000361727|CNTNAP2	REV__ENSG00000174469|ENST00000361727|CNTNAP2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.1380615234375	2	436.139095	870.263638	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.361	1	67.909	67.409	68.409	0.54819								0	0	0	0.30884	1	7398	7398		13.775	0.81615	1		+		53159	21995	35484	35497	60197	60197					-0.17668365530425945
SCEGECYYA	9	Unmodified	_SCEGECYYA_					0	0	0			REV__ENSG00000183682|ENST00000331593|BMP8A	REV__ENSG00000183682|ENST00000331593|BMP8A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.675048828125	2	512.672968	1023.33138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.791	1	15.192	14.692	15.692	-0.59873								0	0	0	0.27974	1	49	49		38.806	8.3025	1		+		53160	18238	35485	35498	60198	60198					-0.17934960390300603
SCENSLKSN	9	Unmodified	_SCENSLKSN_					0	0	0		nc|ENSG00000221994|Q2M218-2|ZNF630;ENSG00000221994|ENST00000276054|ZNF630	nc|ENSG00000221994|Q2M218-2|ZNF630	nc|ENSG00000221994|Q2M218-2|ZNF630	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.2156677246094	2	491.218931	980.423309	0.43716	0.00021474	-3.8352	-0.0018839	-3.398	-0.0016692	491.21692699349103	29.205	1.3236	29.032	28.51	29.833	-0.17336					63	30	3	0	0	0	0.77696	1	1857	1857		31.53	1.0262	1	332230			53161	8694	35486	35499	60199	60199					-0.06768533981585279
SCFPYVLL	8	Unmodified	_SCFPYVLL_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000477988.1_1_2:183790432-183791654:-|nuORF;nc|ENSG00000123338|P55160-2|NCKAP1L;ENSG00000123338|ENST00000293373|NCKAP1L	ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000123338|P55160-2|NCKAP1L	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.2431335449219	2	471.243689	940.472826	-0.11027	-5.1965E-05	0.28829	0.00013585	0.17802	8.3889E-05	471.2436552903768	85.85	3.7163	85.917	84.593	88.309	0.067261					181	85	3	0	0	0	0.86791	1	8628	8628		28.254	2.6802	1	223720			53162	1076;3268	35487	35500	60200	60200					0.0002082576515931578
SCFPYVLL	8	Unmodified	_SCFPYVLL_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000477988.1_1_2:183790432-183791654:-|nuORF;nc|ENSG00000123338|P55160-2|NCKAP1L;ENSG00000123338|ENST00000293373|NCKAP1L	ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000123338|P55160-2|NCKAP1L	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.2414855957031	2	471.243689	940.472826	-0.21882	-0.00010312	0.38918	0.0001834	0.17036	8.0281E-05	471.24368623226155	85.627	3.5823	85.685	84.499	88.081	0.057899					161	82	3	0	0	0	0.89457	1	8859	8859		37.028	5.0736	1	246480			53163	1076;3268	35487	35500	60201	60201					0.0002082576515931578
SCFPYVLL	8	Unmodified	_SCFPYVLL_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENST00000477988.1_1_2:183790432-183791654:-|nuORF;nc|ENSG00000123338|P55160-2|NCKAP1L;ENSG00000123338|ENST00000293373|NCKAP1L	ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000123338|P55160-2|NCKAP1L	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	471.2421569824219	2	471.243689	940.472826	-0.95009	-0.00044772	1.1513	0.00054252	0.20117	9.4799E-05	471.24408596775964	85.692	3.2441	85.877	84.627	87.871	0.18523					176	75	3	0	0	0	0.89457	1	8516	8516		37.028	1.4102	1	288030			53164	1076;3268	35487	35500	60202	60202					0.0002082576515931578
SCFSFLQH	8	Unmodified	_SCFSFLQH_					0	0	0			REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7178955078125	2	484.71837	967.422187	1.6171	0.00078385	-1.8628	-0.00090295	-0.2457	-0.00011909	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.92457	1	11640	11640		47.916	5.4411	1	7541600	+		53165	28277	35488	35501	60203	60203					-0.06282703559827496
SCFSFLQH	8	Unmodified	_SCFSFLQH_					0	0	0			REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71875	2	484.71837	967.422187	1.5654	0.00075878	-2.127	-0.001031	-0.5616	-0.00027222	484.7173495801951	99.412	0.71777	99.775	99.447	100.17	0.36292					52	17	4	0	0	0	0.88944	1	12079	12079		57.811	4.4598	1	4379500	+		53166	28277	35488	35501	60204	60204					-0.06282703559827496
SCFSFLQH	8	Unmodified	_SCFSFLQH_					0	0	0			REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7186279296875	2	484.71837	967.422187	1.8339	0.00088894	-2.5144	-0.0012188	-0.68046	-0.00032983	484.717227769282	100.08	1.4855	100.42	100.11	101.59	0.3459					119	38	5	0	0	0	0.90465	1	12188	12188		40.573	1.7665	1	10268000	+		53167	28277	35488	35501	60205	60205					-0.06282703559827496
SCFSFLQH	8	Unmodified	_SCFSFLQH_					0	0	0			REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	484.71837	967.422187	-0.0892	-4.3237E-05	-0.077517	-3.7574E-05	-0.16672	-8.0811E-05	484.7182268465089	99.929	0.6899	99.97	99.711	100.4	0.041107	0.15436	0.0018111	NaN	57.811	29	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123700	+		53168	28277	35488	35501							-0.06282703559827496
SCFSFLQH	8	Unmodified	_SCFSFLQH_					0	0	0			REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	484.71837	967.422187	2.5573	0.0012396	-2.8093	-0.0013617	-0.252	-0.00012215	484.71686758907407	99.825	0.74405	99.771	99.565	100.31	-0.053734	-0.04447	-0.00083718	NaN	57.811	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84923	+		53169	28277	35488	35501							-0.06282703559827496
SCHCQGSS	8	Unmodified	_SCHCQGSS_					0	0	0			REV__ENSG00000183579|ENST00000544604|ZNRF3	REV__ENSG00000183579|ENST00000544604|ZNRF3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.63616943359375	2	404.639262	807.263972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.44	1	112.51	112.01	113.01	0.066025								0	0	0	0.30976	1	12107	12107		12.959	0.75233	1		+		53170	22615	35489	35502	60206	60206					-0.14736945810568614
SCHLQKKQLRL	11	Unmodified	_SCHLQKKQLRL_					0	0	0		ENSG00000188981|ENST00000438480|MSANTD1	ENSG00000188981|ENST00000438480|MSANTD1	ENSG00000188981|ENST00000438480|MSANTD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.93316650390625	3	451.930968	1352.77107	0.73765	0.00033337	3.0405	0.0013741	3.7781	0.0017074	451.932241061631	98.904	2.3627	99.06	97.538	99.901	0.15659					136	54	4	0	0	0	0.74405	1	10289	10289		23.378	0.81632	1	302530			53171	7975	35490	35503	60207	60207					0.1087987701066595
SCHVRPPL	8	Unmodified	_SCHVRPPL_					0	0	0			REV__ENST00000434027.2_1_5:98106187-98106367:+|nuORF	REV__ENST00000434027.2_1_5:98106187-98106367:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.74444580078125	2	454.742179	907.469806	2.7644	0.0012571	3.3037	0.0015023	6.0681	0.0027594	454.74355172728065	103.83	1.5253	103.79	103.16	104.69	-0.043755					91	36	4	0	0	0	0.85277	1	11447	11447		25.45	3.4903	1	836250	+		53172	26661	35491	35504	60208	60208					0.012369954310202047
SCLRLKVI	8	Unmodified	_SCLRLKVI_					0	0	0		ENST00000300853.7_1_19:45912063-45912522:-|nuORF	ENST00000300853.7_1_19:45912063-45912522:-|nuORF	ENST00000300853.7_1_19:45912063-45912522:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2906799316406	2	466.291505	930.568457	-1.0456	-0.00048758	-2.49	-0.0011611	-3.5356	-0.0016486	466.29021591001344	73.859	1.0735	73.986	73.713	74.787	0.1271					83	42	3	0	0	0	0.87479	1	6850	6850		30.504	1.3541	1	958110			53173	9798	35492	35505	60209	60209					0.10039598676064543
SCPECRIT	8	Unmodified	_SCPECRIT_					0	0	0		ENST00000546624.2_1_12:88177101-88177509:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-3|MKRN1	ENST00000546624.2_1_12:88177101-88177509:-|nuORF	ENST00000546624.2_1_12:88177101-88177509:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7660217285156	2	454.701863	907.389172	-0.10543	-4.794E-05	-2.8981	-0.0013178	-3.0036	-0.0013657	454.7020114905098	71.525	0.16434	72.075	71.99	72.154	0.55009					5	3	2	0	0	0	0.4196	1	8000	8000		13.454	0	1	26602			53174	3882	35493	35506	60210	60210					-0.06822653674214507
SCPLEFSSYGY	11	Unmodified	_SCPLEFSSYGY_					0	0	0		ENSG00000163285|ENST00000295452|GABRG1;nc|ENSG00000113327|P18507-1|GABRG2;ENSG00000113327|ENST00000639213|GABRG2	ENSG00000163285|ENST00000295452|GABRG1;nc|ENSG00000113327|P18507-1|GABRG2	nc|ENSG00000113327|P18507-1|GABRG2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.7216796875	2	626.763171	1251.51179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.035	1	15.113	14.613	15.613	0.077959								0	0	0	0.56276	1	5	5		25.574	2.0514	1				53175	5779;2715	35494	35507	60211	60211					-0.10390538461774668
SCPVPDGH	8	Unmodified	_SCPVPDGH_					0	0	0			REV__ENST00000336219.3_1_14:105477886-105478126:-|nuORF	REV__ENST00000336219.3_1_14:105477886-105478126:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.1760559082031	2	406.173795	810.333038	2.6134	0.0010615	1.5172	0.00061625	4.1306	0.0016778	406.17470361655813	99.321	1.1441	99.683	99.176	100.32	0.36137					76	28	4	0	0	0	0.88915	1	12025	12025		35.201	1.6851	1	2117600	+		53176	25184	35495	35508	60212	60212					-0.07971538519359456
SCSSSSHDNF	10	Unmodified	_SCSSSSHDNF_					0	0	0		nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;ENSG00000158987|ENST00000509018|RAPGEF6;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6	nc|ENSG00000158987|Q8TEU7-5|RAPGEF6	nc|ENSG00000158987|Q8TEU7-5|RAPGEF6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7435302734375	2	535.69582	1069.37709	-0.48216	-0.00025829	1.825	0.00097766	1.3429	0.00071937	536.1991572557075	61.787	0.64815	62.34	62.041	62.689	0.55386					20	14	2	0	0	0	0.37624	1	6639	6639		37.812	4.9991	1	325180			53177	5506	35496	35509	60213	60213					-0.1548259888368193
SCSVEEEMEID	11	Unmodified	_SCSVEEEMEID_					0	0	0		ENSG00000243978|ENST00000520821|RTL9;chrX:110454664-110455202|54|88.02|0.82|6.75|+|ENST00000540313|RTL9,RTL9	ENSG00000243978|ENST00000520821|RTL9	ENSG00000243978|ENST00000520821|RTL9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	635.7442626953125	2	635.744318	1269.47408	0.26256	0.00016692	0.50784	0.00032285	0.77039	0.00048977	635.7444950589221	26.18	0.55397	26.285	26.013	26.567	0.1054					41	24	2	0	0	0	0.69995	1	989	989		31.53	3.6476	1	124970			53178	537	35497	35510	60214	60214					-0.14987417509564693
SCSVEEEMEID	11	Unmodified	_SCSVEEEMEID_					0	0	0		ENSG00000243978|ENST00000520821|RTL9;chrX:110454664-110455202|54|88.02|0.82|6.75|+|ENST00000540313|RTL9,RTL9	ENSG00000243978|ENST00000520821|RTL9	ENSG00000243978|ENST00000520821|RTL9	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	635.744318	1269.47408	3.0483	0.0019379	-2.6497	-0.0016845	0.39856	0.00025338	635.7427674960142	26.915	0.40254	26.574	26.323	26.725	-0.34035	0.14538	-0.0034776	NaN	31.53	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40724			53179	537	35497	35510							-0.14987417509564693
SCVQDMKSY	9	Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M)	_(Acetyl (Protein N-term))SC(Carbamidomethyl (C))VQDM(Oxidation (M))KSY_	SC(1)VQDMKSY	SCVQDM(1)KSY	SC(41)VQDMKSY	SCVQDM(41)KSY	1	1	1			REV__ENST00000515015.1_1_5:140038902-140040409:+|nuORF	REV__ENST00000515015.1_1_5:140038902-140040409:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	588.2418212890625	2	588.239006	1174.46346	-0.6513	-0.00038312	1.6493	0.00097021	0.99805	0.00058709	588.2398115463751	54.661	0.39802	54.653	54.455	54.853	-0.0077095					25	13	2	0	0	0	0.69624	1	4849	4849		40.778	8.8233	1	244900	+		53180	28023	35498	35511	60215	60215	341	417			-0.11679355373325961
SCYCDSCD	8	Unmodified	_SCYCDSCD_					0	0	0			REV__chr13:43059012-43065686|14|14.0|0.42|5.05|+|1|TE_info:L1PB1,L1PB1_dup10508,L1,LINE,donor,-,43056899,43059012|None,DNAJC15|15	REV__chr13:43059012-43065686|14|14.0|0.42|5.05|+|1|TE_info:L1PB1,L1PB1_dup10508,L1,LINE,donor,-,43056899,43059012|None,DNAJC15|15	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.84710693359375	2	448.116971	894.21939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.288	1	94.721	94.221	95.221	0.4324								0	0	0	0.31173	1	11251	11251		1.3276	0.12249	1		+		53181	15574	35499	35512	60216	60216					-0.23195137738935045
SDARIFIIMY	10	Unmodified	_SDARIFIIMY_					0	0	0		ENSG00000134910|ENST00000392708|STT3A;nc|ENSG00000134910|P46977-2|STT3A	ENSG00000134910|ENST00000392708|STT3A	ENSG00000134910|ENST00000392708|STT3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	410.2190246582031	3	410.218003	1227.63218	-0.40522	-0.00016623	1.7786	0.0007296	1.3733	0.00056337	410.21866762821935	16.847	0.32242	16.768	16.659	16.982	-0.079054					24	10	3	0	0	0	0.85633	1	169	169		21.686	3.1547	1	167510			53182	3972	35500	35513	60217	60217					0.027469143224834625
SDASRRIR	8	Unmodified	_SDASRRIR_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.77056884765625	2	480.770314	959.526075	0.24382	0.00011722	2.8412	0.001366	3.085	0.0014832	480.7714939481177	40.905	0.58658	40.986	40.702	41.288	0.081345					34	21	2	0	0	0	0.91982	1	2629	2629		45.972	0	1	275580	+		53183	29943	35501	35514	60218	60218					0.04469339592048982
SDCTFSPFI	9	Unmodified	_SDCTFSPFI_					0	0	0			REV__nc|ENSG00000165071|Q6P5X7-3|TMEM71	REV__nc|ENSG00000165071|Q6P5X7-3|TMEM71	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.7243957519531	2	508.723318	1015.43208	-0.2659	-0.00013527	2.6046	0.001325	2.3387	0.0011898	508.7242604060005	66.654	0.53251	66.619	66.435	66.968	-0.03521					39	22	2	0	0	0	0.78536	1	6385	6385		29.15	3.5755	1	110030	+		53184	21144	35502	35515	60219	60219					-0.07501560345122016
SDDDGSGELDV	11	Unmodified	_SDDDGSGELDV_					0	0	0			REV__ENSG00000162512|ENST00000339394|SDC3	REV__ENSG00000162512|ENST00000339394|SDC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7167358398438	2	554.717473	1107.42039	0.2226	0.00012348	1.3671	0.00075838	1.5897	0.00088185	554.7181138197201	24.832	0.79422	24.786	24.312	25.107	-0.04598					37	17	3	0	0	0	0.7434	1	991	991		23.523	1.5628	1	73033	+		53185	20818	35503	35516	60220	60220					-0.129021306254117
SDDENFMKY	9	Unmodified	_SDDENFMKY_					0	0	0		ENST00000467942.2_1_3:111831271-111835490:+|nuORF;ENSG00000114529|ENST00000264848|C3orf52	ENST00000467942.2_1_3:111831271-111835490:+|nuORF	ENST00000467942.2_1_3:111831271-111835490:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.7435302734375	2	574.731871	1147.44919	-0.85321	-0.00049037	0.6449	0.00037065	-0.20831	-0.00011972	574.7321911691582	48.896	0.61785	48.89	48.693	49.311	-0.0056419					21	13	2	0	0	0	0.64922	1	4070	4070		44.117	0	1	116160			53186	2777	35504	35517	60221	60221					-0.11863684529953389
SDDKTDEDG	9	Unmodified	_SDDKTDEDG_					0	0	0			REV__ENSG00000075340|ENST00000264436|ADD2	REV__ENSG00000075340|ENST00000264436|ADD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.1849365234375	2	491.185808	980.357064	-0.69565	-0.00034169	0.15197	7.4647E-05	-0.54368	-0.00026705	491.1857028871769	64.603	1.5673	64.729	63.577	65.144	0.12545					102	62	2	0	0	0	0.7932	1	5674	5674		20.947	1.587	1	139370	+		53187	16709	35505	35518	60222	60222					-0.13390071342655574
SDDYSTMKKI	10	Unmodified	_SDDYSTMKKI_					0	0	0		nc|ENSG00000041515|Q9Y6X6|MYO16;ENSG00000041515|ENST00000457511|MYO16	nc|ENSG00000041515|Q9Y6X6|MYO16	nc|ENSG00000041515|Q9Y6X6|MYO16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.2861328125	2	594.284271	1186.55399	0.15472	9.1949E-05	3.0316	0.0018016	3.1863	0.0018936	594.2860901738973	30.115	0.64814	30.026	29.706	30.354	-0.089544					33	14	3	0	0	0	0.86471	1	1979	1979		30.318	0	1	667230			53188	932	35506	35519	60223	60223					-0.03182563053383092
SDELRRLQREL	11	Unmodified	_SDELRRLQREL_					0	0	0		chr17:29576441-29576522|13|13.92|0.6|4.54|-|0|None,GIT1|1	chr17:29576441-29576522|13|13.92|0.6|4.54|-|0|None,GIT1|1	chr17:29576441-29576522|13|13.92|0.6|4.54|-|0|None,GIT1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2638244628906	3	472.263551	1413.76882	-0.53435	-0.00025235	1.2322	0.00058193	0.69788	0.00032958	472.2641098014204	18.371	0.65911	17.749	17.539	18.198	-0.62141					24	14	3	0	0	0	0.75779	1	399	399		20.315	0	1	277690			53189	223	35507	35520	60224	60224					0.07849119806564886
SDEPLLLIL	9	Unmodified	_SDEPLLLIL_					0	0	0			REV__ENST00000454748.7_1_19:49793382-49793970:-|nuORF	REV__ENST00000454748.7_1_19:49793382-49793970:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8000793457031	2	506.799883	1011.58521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.512	1	53.45	52.95	53.95	-0.062065								0	0	0	0.2969	1	4380	4380		31.955	1.4512	1		+		53190	26928	35508	35521	60225	60225					0.07988378043023658
SDESSDDDSD	10	Unmodified	_SDESSDDDSD_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1622314453125	2	536.16527	1070.31599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.886	1	19.93	19.43	20.43	0.043747								0	0	0	0.45132	1	448	448		14.865	1.9057	1				53191	1462	35509	35522	60226	60226					-0.21635877172798246
SDESSDDDSD	10	Unmodified	_SDESSDDDSD_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1661376953125	2	536.16527	1070.31599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.993	1	21.039	20.539	21.539	0.045401								0	0	0	0.45132	1	539	539		10.265	0	1				53192	1462	35509	35522	60227	60227					-0.21635877172798246
SDESSDDDSD	10	Unmodified	_SDESSDDDSD_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.16357421875	2	536.16527	1070.31599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.412	1	25.517	25.017	26.017	0.1054								0	0	0	0.45132	1	916	916		20.947	3.582	1				53193	1462	35509	35522	60228	60228					-0.21635877172798246
SDESSDDDSD	10	Unmodified	_SDESSDDDSD_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.1705932617188	2	536.16527	1070.31599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.321	1	20.3	19.8	20.8	-0.020922								0	0	0	0.45132	1	479	479		20.947	5.3051	1				53194	1462	35509	35522	60229	60229					-0.21635877172798246
SDESTHHP	8	Unmodified	_SDESTHHP_					0	0	0			REV__ENSG00000152818|ENST00000367545|UTRN	REV__ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.18804931640625	2	455.188488	908.362424	0.61308	0.00027907	-0.53696	-0.00024442	0.076117	3.4647E-05	455.18808099033294	28.088	1.2376	28.065	27.313	28.55	-0.023556					55	29	3	0	0	0	0.86288	1	1307	1307		26.796	0.10319	1	113930	+		53195	20318	35510	35523	60230	60230					-0.09542302969521188
SDGGQFPLVP	10	Unmodified	_SDGGQFPLVP_					0	0	0			REV__ENST00000533581.1_1_1:31658018-31661124:-|nuORF	REV__ENST00000533581.1_1_1:31658018-31661124:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7551574707031	2	508.756007	1015.49746	0.92354	0.00046986	-0.94896	-0.00048279	-0.025423	-1.2934E-05	508.75538702998495	63.673	1.0094	64.227	63.72	64.729	0.55449					48	23	4	0	0	0	0.51302	1	6876	6876		54.776	0	1	357590	+		53196	28349	35511	35524	60231	60231					-0.009668228277632807
SDGLAHLDN	9	Unmodified	_SDGLAHLDN_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.22015380859375	2	471.219788	940.425024	-0.094114	-4.4348E-05	0.13348	6.29E-05	0.039369	1.8551E-05	471.2196630157112	35.385	0.84711	35.373	35.035	35.882	-0.012203					37	18	3	0	0	0	0.076066	2	2188	2188;2200		98.582	25.327	1	295230			53197	8826	35512	35525	60232;60233	60232					-0.04757156901337112
SDGLAHLDN	9	Unmodified	_SDGLAHLDN_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.2193298339844	2	471.219788	940.425024	-0.67284	-0.00031705	0.64211	0.00030257	-0.030728	-1.448E-05	471.2199003933378	35.497	0.97022	35.441	35.047	36.017	-0.055904					40	21	3	0	0	0	0.010555	4	2298	2288;2298;2309;2330		132.76	42.388	1	359630			53198	8826	35512	35525	60234;60235;60236;60237	60235					-0.04757156901337112
SDGLAHLDN	9	Unmodified	_SDGLAHLDN_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.2193908691406	2	471.219788	940.425024	-1.6888	-0.00079581	1.6252	0.00076582	-0.06364	-2.9989E-05	471.22040714852926	35.389	0.99543	35.396	34.937	35.932	0.0063896					44	22	3	0	0	0	0.021781	4	2222	2210;2222;2234;2248		124.08	27.89	1	342000			53199	8826	35512	35525	60238;60239;60240;60241	60239					-0.04757156901337112
SDGLCCWCCSC	11	Unmodified	_SDGLCCWCCSC_					0	0	0			REV__ENSG00000178761|ENST00000357635|FAM219B	REV__ENSG00000178761|ENST00000357635|FAM219B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.1731567382812	2	590.17344	1178.33233	-0.49244	-0.00029063	1.2176	0.00071861	0.72519	0.00042799	590.1740214513908	32.948	0.66472	32.951	32.683	33.348	0.0030785					21	14	2	0	0	0	0.78986	1	1879	1879		13.454	6.2607	1	43614	+		53200	22294	35513	35526	60242	60242					-0.2497052860887834
SDGPYIIGMW	10	Unmodified	_SDGPYIIGMW_					0	0	0			REV__nc|ENSG00000211966|A0A0C4DH38|IGHV5-51	REV__nc|ENSG00000211966|A0A0C4DH38|IGHV5-51	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.7669067382812	2	569.765517	1137.51648	-0.41688	-0.00023753	2.7118	0.0015451	2.2949	0.0013075	569.7669206629952	60.707	0.52001	60.716	60.36	60.88	0.0081215					45	17	3	0	0	0	0.86452	1	5248	5248		30.504	0	1	499530	+		53201	30197	35514	35527	60243	60243					-0.04677609528357607
SDHMDLGP	8	Unmodified	_SDHMDLGP_					0	0	0		ENSG00000130751|ENST00000602212|NPAS1;nc|ENSG00000130751|Q99742-2|NPAS1	ENSG00000130751|ENST00000602212|NPAS1	ENSG00000130751|ENST00000602212|NPAS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.1861877441406	2	436.18436	870.354167	1.2429	0.00054211	2.5665	0.0011195	3.8094	0.0016616	436.1857223353316	96.963	1.8497	97.368	96.928	98.777	0.40498					75	44	3	0	0	0	0.88915	1	11636	11636		35.201	1.6851	1	1011400			53202	3677	35515	35528	60244	60244					-0.08619573210489762
SDHYYGTG	8	Unmodified	_SDHYYGTG_					0	0	0		nc|ENSG00000111912|Q8NI08-5|NCOA7;nc|ENSG00000111912|Q8NI08-7|NCOA7;nc|ENSG00000111912|Q8NI08-2|NCOA7;ENSG00000111912|ENST00000392477|NCOA7	nc|ENSG00000111912|Q8NI08-5|NCOA7	nc|ENSG00000111912|Q8NI08-5|NCOA7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2741394042969	2	450.180132	898.345711	-1.2538	-0.00056443	3.1244	0.0014065	1.8706	0.00084211	450.1805032751073	92.983	0.65356	93.209	92.915	93.569	0.22547					21	15	2	0	0	0	0.4196	1	9448	9448		33.516	5.6333	1	76813			53203	2624	35516	35529	60245	60245					-0.10752803855473303
SDIHKGRKI	9	Unmodified	_SDIHKGRKI_					0	0	0		nc|ENSG00000147180|Q9Y462|ZNF711;nc|ENSG00000147180|Q9Y462-2|ZNF711;ENSG00000147180|ENST00000674551|ZNF711	nc|ENSG00000147180|Q9Y462|ZNF711	nc|ENSG00000147180|Q9Y462|ZNF711	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3103637695312	2	527.311815	1052.60908	0.16127	8.5039E-05	-1.0775	-0.00056818	-0.91623	-0.00048314	527.3111035367203	79.218	1.2329	79.768	79.023	80.256	0.54945					64	28	3	0	0	0	0.76764	1	9091	9091		34.173	5.023	1	880030			53204	4888	35517	35530	60246	60246					0.08487656320039605
SDISLLLLFV	10	Unmodified	_SDISLLLLFV_					0	0	0		ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	ENSG00000221843|ENST00000447166|C2orf16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.34033203125	2	560.336633	1118.65871	2.9009	0.0016255	3.4846	0.0019525	6.3855	0.003578	560.3384791854071	101.98	1.2376	102.3	101.86	103.1	0.32511					132	30	6	0	0	0	0.86452	1	12384	12384		30.504	6.3009	1	15824000			53205	8672	35518	35531	60247	60247					0.1041292648549188
SDKEVPPEV	9	Unmodified	_SDKEVPPEV_					0	0	0			REV__ENST00000373358.7_2_X:75392870-75392993:+|nuORF	REV__ENST00000373358.7_2_X:75392870-75392993:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7931213378906	2	500.253297	998.492041	0.80145	0.00040093	-0.5291	-0.00026468	0.27236	0.00013625	500.7553674268689	32.274	0.17101	32.381	32.274	32.446	0.10707					5	3	2	0	0	0	0.20789	1	2266	2266		32.812	14.488	1	20136	+		53206	25759	35519	35532	60248	60248					-0.007265464102374608
SDKKRKKSL	9	Unmodified	_SDKKRKKSL_					0	0	0			REV__ENSG00000038219|ENST00000040738|BOD1L1	REV__ENSG00000038219|ENST00000040738|BOD1L1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.3169555664062	2	545.340572	1088.66659	0.75605	0.0004123	-1.8264	-0.00099599	-1.0703	-0.00058369	545.3389459974295	90.724	0.6398	90.878	90.471	91.111	0.15388					31	15	3	0	0	0	0.20789	1	9073	9073		32.812	8.6097	1	112150	+		53207	16300	35520	35533	60249	60249					0.12580498525608164
SDKLKLYNIW	10	Unmodified	_SDKLKLYNIW_					0	0	0			REV__ENSG00000164743|ENST00000297324|C8orf48	REV__ENSG00000164743|ENST00000297324|C8orf48	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3609008789062	2	640.355888	1278.69722	0.92817	0.00059436	3.6966	0.0023671	4.6247	0.0029615	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.86471	1	10469	10469		30.318	5.7985	1	603720	+		53208	21110	35521	35534	60250	60250					0.0690223211997818
SDKPDMAEIE	10	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))SDKPDM(Oxidation (M))AEIE_		SDKPDM(1)AEIE		SDKPDM(91)AEIE	1	0	1		ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF	ENSG00000205542|ENST00000451311|TMSB4X	ENSG00000205542|ENST00000451311|TMSB4X	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.7553100585938	2	596.755543	1191.49653	-0.1923	-0.00011476	-0.21324	-0.00012725	-0.40554	-0.00024201	596.7552432014232	43.02	0.76817	42.991	42.675	43.443	-0.029465					49	17	4	0	0	0	0.17795	2	3259	3247;3259		91.265	23.107	1	1058300			53209	8531	35522	35535	60251;60252	60252		148			-0.09155450049638603
SDKPDMAEIE	10	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))SDKPDM(Oxidation (M))AEIE_		SDKPDM(1)AEIE		SDKPDM(76)AEIE	1	0	1		ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF	ENSG00000205542|ENST00000451311|TMSB4X	ENSG00000205542|ENST00000451311|TMSB4X	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.755615234375	2	596.755543	1191.49653	-0.57194	-0.00034131	0.046203	2.7572E-05	-0.52573	-0.00031373	596.7554246535007	42.981	0.89618	42.945	42.595	43.491	-0.035816					53	20	4	0	0	0	0.26675	3	3331	3331;3340;3355		76.17	14.062	1	1328200			53210	8531	35522	35535	60253;60254;60255	60253		148			-0.09155450049638603
SDKPDMAEIE	10	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))SDKPDM(Oxidation (M))AEIE_		SDKPDM(1)AEIE		SDKPDM(73)AEIE	1	0	1		ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF	ENSG00000205542|ENST00000451311|TMSB4X	ENSG00000205542|ENST00000451311|TMSB4X	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.7557983398438	2	596.755543	1191.49653	-2.1043	-0.0012557	1.5398	0.00091886	-0.56449	-0.00033686	596.7562804580269	42.966	0.87915	42.966	42.535	43.414	0.00016785					54	20	4	0	0	0	0.2953	1	3255	3255		72.879	10.772	1	1234200			53211	8531	35522	35535	60256	60256		148			-0.09155450049638603
SDKPDMAEIE	10	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))SDKPDM(Oxidation (M))AEIE_		SDKPDM(1)AEIE		SDKPDM(64)AEIE	1	0	1		ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF	ENSG00000205542|ENST00000451311|TMSB4X	ENSG00000205542|ENST00000451311|TMSB4X	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.755126953125	2	596.755543	1191.49653	-0.90303	-0.00053889	-0.015573	-9.2932E-06	-0.9186	-0.00054818	596.7554528889995	43.073	0.65428	43.506	43.212	43.867	0.4334					40	15	4	0	0	0	0.40664	1	3871	3871		63.534	10.597	1	1210700			53212	8531	35522	35535	60257	60257		148			-0.09155450049638603
SDKPDMAEIE	10	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))SDKPDM(Oxidation (M))AEIE_		SDKPDM(1)AEIE		SDKPDM(50)AEIE	1	0	1		ENSG00000205542|ENST00000451311|TMSB4X;ENST00000323496.5_1_9:131104444-131104642:+|nuORF	ENSG00000205542|ENST00000451311|TMSB4X	ENSG00000205542|ENST00000451311|TMSB4X	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.7556762695312	2	596.755543	1191.49653	-2.0153	-0.0012027	1.3188	0.00078702	-0.69651	-0.00041564	596.7562389606134	42.88	0.5298	43.578	43.339	43.869	0.69754					32	12	3	0	0	0	0.60985	1	3867	3867		49.536	7.1399	1	1335300			53213	8531	35522	35535	60258	60258		148			-0.09155450049638603
SDKSAFTRVA	10	Unmodified	_SDKSAFTRVA_					0	0	0		ENST00000581133.5_1_17:26906381-26907081:-|nuORF;ENSG00000076382|ENST00000321765|SPAG5	ENST00000581133.5_1_17:26906381-26907081:-|nuORF	ENST00000581133.5_1_17:26906381-26907081:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.2860717773438	2	541.285463	1080.55637	0.52598	0.00028471	-0.67244	-0.00036398	-0.14646	-7.9278E-05	541.2849430955068	20.499	0.76031	20.43	20.175	20.935	-0.069733					65	32	4	0	0	0	0.49027	1	537	537		56.632	3.6955	1	220230			53214	1357	35523	35536	60259	60259					0.019316534665676954
SDLGALLKY	9	Unmodified	_SDLGALLKY_					0	0	0			REV__ENSG00000266714|ENST00000645453|MYO15B	REV__ENSG00000266714|ENST00000645453|MYO15B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.278076171875	2	490.276575	978.538597	0.45823	0.00022466	-0.70052	-0.00034345	-0.24229	-0.00011879	490.27608739962903	51.531	0.54039	52.199	51.895	52.436	0.66729					24	12	3	0	0	0	0.25483	1	5140	5140		68.787	1.2932	1	933890	+		53215	23964	35524	35537	60260	60260					0.04846938211710494
SDLGALLKY	9	Unmodified	_SDLGALLKY_					0	0	0			REV__ENSG00000266714|ENST00000645453|MYO15B	REV__ENSG00000266714|ENST00000645453|MYO15B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	490.276575	978.538597	-0.42934	-0.00021049	0.21014	0.00010303	-0.21919	-0.00010747	490.2765661409751	51.707	0.58644	52.143	51.906	52.492	0.43505	-0.028027	0.00042279	NaN	68.787	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	802460	+		53216	23964	35524	35537							0.04846938211710494
SDLGALLKY	9	Unmodified	_SDLGALLKY_					0	0	0			REV__ENSG00000266714|ENST00000645453|MYO15B	REV__ENSG00000266714|ENST00000645453|MYO15B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	490.276575	978.538597	0.45823	0.00022466	-0.70052	-0.00034345	-0.24229	-0.00011879	490.27608739962903	51.531	0.54039	52.199	51.895	52.436	0.66729	0.028027	-0.00047016	NaN	68.787	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	933890	+		53217	23964	35524	35537							0.04846938211710494
SDLKWIKPN	9	Unmodified	_SDLKWIKPN_					0	0	0			REV__ENST00000559777.1_1_15:64736888-64747260:+|nuORF	REV__ENST00000559777.1_1_15:64736888-64747260:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.80712890625	2	550.808574	1099.60259	-1.5611	-0.00085986	-1.905	-0.0010493	-3.4661	-0.0019092	550.8073038939729	29.672	1.5276	29.666	29.02	30.547	-0.0064812					96	34	5	0	0	0	0.77244	1	1843	1843		32.812	1.2826	1	1060600	+		53218	17427	35525	35538	60261	60261					0.05677718368656315
SDLLTLLLAM	10	Unmodified	_SDLLTLLLAM_					0	0	0		ENSG00000101188|ENST00000370501|NTSR1	ENSG00000101188|ENST00000370501|NTSR1	ENSG00000101188|ENST00000370501|NTSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3179321289062	2	545.314843	1088.61513	1.9901	0.0010853	1.4177	0.00077309	3.4078	0.0018583	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.84112	1	9037	9037		37.159	1.5408	1	4704900			53219	1906	35526	35539	60262	60262					0.07436993716692086
SDLLVVTRSN	10	Unmodified	_SDLLVVTRSN_					0	0	0			REV__nc|ENSG00000156931|Q8N3P4-2|VPS8	REV__nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3062744140625	2	552.306395	1102.59824	-1.4446	-0.00079788	1.6112	0.00088988	0.16659	9.2009E-05	552.3071705183876	92.436	2.9887	92.622	91.324	94.313	0.18582					239	70	4	0	0	0	0.73395	1	9287	9287		42.864	0.46813	1	1677300	+		53220	20517	35527	35540	60263	60263					0.05104209155092576
SDLQFPLAVF	10	Unmodified	_SDLQFPLAVF_					0	0	0			REV__ENSG00000275395|ENST00000616721|FCGBP	REV__ENSG00000275395|ENST00000616721|FCGBP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.853515625	2	568.802957	1135.59136	0.86947	0.00049456	-1.953	-0.0011109	-1.0835	-0.00061632	568.8019371803448	102.63	0.12553	102.75	102.68	102.81	0.12622					4	2	2	0	0	0	0.37624	1	10816	10816		32.812	0	1	33399	+		53221	24011	35528	35541	60264	60264					0.028988962745188473
SDLVKQGRV	9	Unmodified	_SDLVKQGRV_					0	0	0			REV__ENST00000548647.1_1_12:57037677-57039699:-|nuORF	REV__ENST00000548647.1_1_12:57037677-57039699:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2904357910156	2	501.290548	1000.56654	-0.97974	-0.00049113	0.89004	0.00044617	-0.089695	-4.4963E-05	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.77244	1	8021	8021		32.812	3.6629	1	2111000	+		53222	17842	35529	35542	60265	60265					0.06628261191815454
SDLVKQGRV	9	Unmodified	_SDLVKQGRV_					0	0	0			REV__ENST00000548647.1_1_12:57037677-57039699:-|nuORF	REV__ENST00000548647.1_1_12:57037677-57039699:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904052734375	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.77696	2	8847	8847;8895		31.53	2.3598	1	9565500	+		53223	17842	35529	35542	60266;60267	60266					0.06628261191815454
SDLVKQGRV	9	Unmodified	_SDLVKQGRV_					0	0	0			REV__ENST00000548647.1_1_12:57037677-57039699:-|nuORF	REV__ENST00000548647.1_1_12:57037677-57039699:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29022216796875	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.71772	1	8656	8656		39.253	8.7492	1	2850500	+		53224	17842	35529	35542	60268	60268					0.06628261191815454
SDLVKQGRV	9	Unmodified	_SDLVKQGRV_					0	0	0			REV__ENST00000548647.1_1_12:57037677-57039699:-|nuORF	REV__ENST00000548647.1_1_12:57037677-57039699:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.290283203125	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.77696	1	9149	9149		31.53	1.2121	1	9883700	+		53225	17842	35529	35542	60269	60269					0.06628261191815454
SDLVKQGRV	9	Unmodified	_SDLVKQGRV_					0	0	0			REV__ENST00000548647.1_1_12:57037677-57039699:-|nuORF	REV__ENST00000548647.1_1_12:57037677-57039699:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29034423828125	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.76255	3	8689	8689;8739;8813		35.618	5.1146	1	9566900	+		53226	17842	35529	35542	60270;60271;60272	60270					0.06628261191815454
SDLVKQKKSD	10	Unmodified	_SDLVKQKKSD_					0	0	0		nc|ENSG00000162105|Q9UPX8-4|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;ENSG00000162105|ENST00000601538|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3181762695312	2	574.319502	1146.62445	-1.0331	-0.00059332	0.89024	0.00051128	-0.14284	-8.2035E-05	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.5442	1	9840	9840		53.089	16.642	1	1380900			53227	5669	35530	35543	60273	60273					0.05700478326571101
SDLVKQKKSD	10	Unmodified	_SDLVKQKKSD_					0	0	0		nc|ENSG00000162105|Q9UPX8-4|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;ENSG00000162105|ENST00000601538|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3197631835938	2	574.319502	1146.62445	0.59155	0.00033974	-0.58489	-0.00033592	0.0066607	3.8253E-06	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.8545	1	9616	9616		36.447	2.5251	1	1777600			53228	5669	35530	35543	60274	60274					0.05700478326571101
SDMGILNYM	9	Oxidation (M)	_SDMGILNYM(Oxidation (M))_		SDMGILNYM(1)		SDM(-69)GILNYM(69)	0	0	1			REV__ENST00000488742.5_1_6:10527822-10527861:+|nuORF	REV__ENST00000488742.5_1_6:10527822-10527861:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2274780273438	2	530.22791	1058.44127	0.38076	0.00020189	0.070124	3.7182E-05	0.45089	0.00023907	530.2278276884957	29.363	0.92472	29.394	29.053	29.978	0.030947					58	28	3	0	0	0	0.18566	1	1447	1447		76.847	13.54	2	251920	+		53229	27603	35531	35544	60275	60275		413			-0.0856153505110342
SDMGILNYM	9	Oxidation (M)	_SDMGILNYM(Oxidation (M))_					0	0	1			REV__ENST00000488742.5_1_6:10527822-10527861:+|nuORF	REV__ENST00000488742.5_1_6:10527822-10527861:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	530.22791	1058.44127	0.18726	9.9289E-05	0.25408	0.00013472	0.44134	0.00023401	530.2279066231735	29.208	0.5835	29.32	29.087	29.67	0.11225	-0.24398	-0.00025571	NaN	76.847	59	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206490	+		53230	27603	35531	35544				413			-0.0856153505110342
SDMGILNYM	9	Oxidation (M)	_SDMGILNYM(Oxidation (M))_					0	0	1			REV__ENST00000488742.5_1_6:10527822-10527861:+|nuORF	REV__ENST00000488742.5_1_6:10527822-10527861:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	530.22791	1058.44127	-0.39318	-0.00020847	1.1633	0.00061679	0.77008	0.00040832	530.2282714337979	29.783	0.52175	29.811	29.575	30.096	0.028618	0.24722	0.00070843	NaN	76.847	20	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	179910	+		53231	27603	35531	35544				413			-0.0856153505110342
SDMGILNYM	9	Oxidation (M)	_SDMGILNYM(Oxidation (M))_					0	0	1			REV__ENST00000488742.5_1_6:10527822-10527861:+|nuORF	REV__ENST00000488742.5_1_6:10527822-10527861:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	530.22791	1058.44127	0.36621	0.00019417	0.42134	0.00022341	0.78755	0.00041758	530.2278599265786	29.947	0.64824	29.857	29.575	30.223	-0.089544	0.29327	-7.8334E-05	NaN	76.847	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128400	+		53232	27603	35531	35544				413			-0.0856153505110342
SDNNLKDY	8	Unmodified	_SDNNLKDY_					0	0	0		nc|ENSG00000167210|Q8IVV2|LOXHD1;ENSG00000167210|ENST00000642948|LOXHD1;ENST00000335730.6_1_18:44089558-44181581:-|nuORF	nc|ENSG00000167210|Q8IVV2|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7179870605469	2	484.719621	967.42469	1.6171	0.00078385	-4.4441	-0.0021542	-2.827	-0.0013703	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.9283	1	11938	11938		49.442	7.0454	1	7541600			53233	6278	35532	35545	60276	60276					-0.06032576621191765
SDPGSQLI	8	Unmodified	_SDPGSQLI_					0	0	0			REV__ENSG00000163362|ENST00000413687|INAVA	REV__ENSG00000163362|ENST00000413687|INAVA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.934326171875	2	408.708525	815.402498	-1.9383	-0.00079219	4.318	0.0017648	2.3798	0.00097262	408.7101585660649	16.433	0.17768	16.481	16.402	16.579	0.047804					13	7	2	0	0	0	0.4196	1	147	147		12.959	0	1	85413	+		53234	20904	35533	35546	60277	60277					-0.01258756298955177
SDPITRDHMGS	11	Unmodified	_SDPITRDHMGS_					0	0	0		ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4;ENST00000572067.1_1_16:67917790-67918048:+|nuORF	ENSG00000038358|ENST00000358933|EDC4	ENSG00000038358|ENST00000358933|EDC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.2807006835938	2	608.274769	1214.53499	-1.3557	-0.00082464	-2.4535	-0.0014924	-3.8092	-0.002317	608.273212366521	66.999	0.61171	67.027	66.721	67.332	0.02858					64	29	3	0	0	0	0.50531	1	6334	6334		51.528	3.6122	1	210580			53235	916	35534	35547	60278	60278					-0.06370099624473369
SDPKQSEAEL	10	Unmodified	_SDPKQSEAEL_					0	0	0			REV__nc|ENSG00000284701|A6NEH6|TMEM247	REV__nc|ENSG00000284701|A6NEH6|TMEM247	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.263916015625	2	552.264393	1102.51423	0.34191	0.00018883	-0.82879	-0.00045771	-0.48688	-0.00026889	552.2639656762759	56.237	0.71724	56.797	56.512	57.23	0.55953					26	16	2	0	0	0	0.23822	1	5830	5830		79.713	2.395	1	759770	+		53236	30278	35535	35548	60279	60279					-0.032923667324666894
SDPKQSEAEL	10	Unmodified	_SDPKQSEAEL_					0	0	0			REV__nc|ENSG00000284701|A6NEH6|TMEM247	REV__nc|ENSG00000284701|A6NEH6|TMEM247	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	552.264393	1102.51423	0.34191	0.00018883	-0.82879	-0.00045771	-0.48688	-0.00026889	552.2639656762759	56.237	0.71724	56.797	56.512	57.23	0.55953	0.011695	-0.0013242	NaN	79.713	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	759770	+		53237	30278	35535	35548							-0.032923667324666894
SDPRRRKKPK	10	Unmodified	_SDPRRRKKPK_					0	0	0			REV__nc|ENSG00000005889|P17010-2|ZFX	REV__nc|ENSG00000005889|P17010-2|ZFX	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.5913391113281	3	423.261705	1266.76329	0.3473	0.000147	0.44554	0.00018858	0.79284	0.00033558	423.2617206985389	57.86	0.17242	57.971	57.918	58.091	0.11027					13	8	2	0	0	0	0.37624	1	4911	4911		10.104	0	1	46564	+		53238	16092	35536	35549	60280	60280					0.1405748580539239
SDQIPKECRNL	11	Unmodified	_SDQIPKECRNL_					0	0	0			REV__ENSG00000215853|ENST00000316073|RPTN	REV__ENSG00000215853|ENST00000316073|RPTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78070068359375	3	434.887205	1301.63978	1.6794	0.00073034	-1.7944	-0.00078037	-0.11504	-5.0028E-05	434.8850512100156	35.509	0.34219	35.89	35.635	35.977	0.3812					11	8	2	0	0	0	0.17368	1	2733	2733		22.562	0	1	112930	+		53239	23692	35537	35550	60281	60281					0.0010302185212367476
SDREDGNYCPP	11	Unmodified	_SDREDGNYCPP_					0	0	0		nc|ENSG00000031823|Q9H6Z4-3|RANBP3;nc|ENSG00000031823|Q9H6Z4-2|RANBP3;ENSG00000031823|ENST00000340578|RANBP3	nc|ENSG00000031823|Q9H6Z4-3|RANBP3	nc|ENSG00000031823|Q9H6Z4-3|RANBP3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2533264160156	3	418.168148	1251.48262	1.3429	0.00056155	1.3146	0.00054974	2.6575	0.0011113	418.5021165105675	34.779	0.8236	35.161	34.811	35.635	0.3812					34	20	3	0	0	0	0.1767	1	2639	2639		18.531	0	1	135850			53240	883	35538	35551	60282	60282					-0.13306682758070565
SDRVLVTVE	9	Unmodified	_SDRVLVTVE_					0	0	0			REV__chr19:40458545-40467684|15|40.53|0.05|9.58|-|2|BLVRB,None|3	REV__chr19:40458545-40467684|15|40.53|0.05|9.58|-|2|BLVRB,None|3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.282958984375	2	509.282389	1016.55022	-1.6332	-0.00083176	1.4774	0.00075239	-0.15586	-7.9376E-05	509.2829787451453	36.928	0.52848	36.928	36.69	37.218	0					22	11	3	0	0	0	0.73802	1	2196	2196		37.812	2.1932	1	71812	+		53241	15702	35539	35552	60283	60283					0.04261135235049096
SDSEDDDSSD	10	Unmodified	_SDSEDDDSSD_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.1651000976562	2	536.16527	1070.31599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.204	1	21.285	20.785	21.785	0.081615								0	0	0	0.45132	1	580	580		10.866	0	1		+		53242	23285	35540	35553	60284	60284					-0.21635877172798246
SDSHPAGH	8	Unmodified	_SDSHPAGH_					0	0	0			REV__nc|ENSG00000248290|Q16473|TNXA	REV__nc|ENSG00000248290|Q16473|TNXA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.17041015625	2	404.172641	806.33073	-1.8319	-0.00074042	-4.3741	-0.0017679	-6.2061	-0.0025083	404.17089024317255	78.364	3.0861	78.491	77.697	80.783	0.12695					160	99	2	0	0	0	0.81548	2	7429	7429;7440		28.254	1.4582	1	7642900	+		53243	30235	35541	35554	60285;60286	60285					-0.08018250932809678
SDSTHVIPGES	11	Unmodified	_SDSTHVIPGES_					0	0	0		ENST00000502950.1_1_4:183601480-183676413:+|nuORF;ENSG00000218336|ENST00000511685|TENM3	ENST00000502950.1_1_4:183601480-183676413:+|nuORF	ENST00000502950.1_1_4:183601480-183676413:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.7608642578125	2	564.762017	1127.50948	1.8171	0.0010262	-3.7098	-0.0020951	-1.8927	-0.0010689	564.7595622779485	23.779	0.71997	23.205	22.878	23.598	-0.57415					31	16	3	0	0	0	0.48529	1	1086	1086		52.937	1.744	1	195780			53244	8661	35542	35555	60287	60287					-0.049172508752235444
SDSVSASSRRK	11	Unmodified	_SDSVSASSRRK_					0	0	0			REV__nc|ENSG00000102760|Q9H4X1-2|RGCC	REV__nc|ENSG00000102760|Q9H4X1-2|RGCC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.30908203125	2	590.307458	1178.60036	0.30484	0.00017995	2.9742	0.0017557	3.279	0.0019356	590.3091273196425	32.679	0.65199	32.625	32.317	32.969	-0.054337					30	14	3	0	0	0	0.638	1	1919	1919		40.058	2.2467	1	144860	+		53245	17352	35543	35556	60288	60288					0.01820637892888044
SDTLKKLK	8	Unmodified	_SDTLKKLK_					0	0	0		ENST00000512857.5_1_4:99182716-99308609:+|nuORF;ENST00000511379.5_1_4:99182716-99300325:+|nuORF;ENST00000505378.5_1_4:99182716-99313239:+|nuORF;ENST00000507303.5_1_4:99182716-99313239:+|nuORF;nc|ENSG00000138698|P52306-6|RAP1GDS1;nc|ENSG00000138698|P52306-2|RAP1GDS1;nc|ENSG00000138698|P52306-3|RAP1GDS1;nc|ENSG00000138698|P52306-4|RAP1GDS1;ENSG00000138698|ENST00000408927|RAP1GDS1;nc|ENSG00000138698|P52306-5|RAP1GDS1	ENST00000512857.5_1_4:99182716-99308609:+|nuORF	ENST00000512857.5_1_4:99182716-99308609:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.25787353515625	2	466.792392	931.570232	0.2583	0.00012057	-1.1819	-0.00055172	-0.92365	-0.00043115	466.79218523070875	32.074	0.38657	32.181	31.973	32.36	0.10707					11	8	2	0	0	0	0.4196	1	2249	2249		12.207	0	1	47746			53246	4320	35544	35557	60289	60289					0.10170930965659863
SDTLPRKK	8	Unmodified	_SDTLPRKK_					0	0	0		nc|ENSG00000144824|Q86SQ0-2|PHLDB2;nc|ENSG00000144824|Q86SQ0-3|PHLDB2;ENSG00000144824|ENST00000431670|PHLDB2	nc|ENSG00000144824|Q86SQ0-2|PHLDB2	nc|ENSG00000144824|Q86SQ0-2|PHLDB2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7790832519531	2	472.779816	943.545079	-1.8479	-0.00087367	1.6348	0.0007729	-0.21314	-0.00010077	472.780545021735	35.415	0.45473	35.415	35.146	35.601	0					17	11	2	0	0	0	0.93786	1	1976	1976		53.351	16.905	1	48684			53247	4734	35545	35558	60290	60290					0.07104876163100471
SDVALMAIY	9	Oxidation (M)	_SDVALM(Oxidation (M))AIY_		SDVALM(1)AIY		SDVALM(42)AIY	0	0	1			REV__nc|ENSG00000139977|Q147X3-2|NAA30	REV__nc|ENSG00000139977|Q147X3-2|NAA30	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.7464294433594	2	499.746793	997.479033	-0.072025	-3.5994E-05	-0.087005	-4.3481E-05	-0.15903	-7.9475E-05	499.7467280692381	68.276	1.7033	68.661	68.028	69.731	0.38482					79	40	4	0	0	0	0.67235	1	7488	7488		42.474	8.9589	1	539910	+		53248	19587	35546	35559	60291	60291		291			-0.0198070079397894
SDVGLIMA	8	Unmodified	_SDVGLIMA_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2090148925781	2	403.209847	804.40514	-1.2088	-0.00048741	-0.91536	-0.00036908	-2.1242	-0.00085649	403.20939277352	86.047	3.2334	86.047	85.315	88.548	0					134	74	4	0	0	0	0.86288	1	8186	8186		26.796	1.3459	1	1412000	+		53249	16877	35547	35560	60292	60292					-0.004886241656436141
SDVGLIMA	8	Unmodified	_SDVGLIMA_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2099609375	2	403.209847	804.40514	0.59952	0.00024173	-2.8003	-0.0011291	-2.2008	-0.00088739	403.20865750603866	85.732	1.8224	85.881	85.428	87.25	0.14857					100	42	4	0	0	0	0.86288	1	8381	8381		26.796	0	1	1321000	+		53250	16877	35547	35560	60293	60293					-0.004886241656436141
SDVLLGVLL	9	Unmodified	_SDVLLGVLL_					0	0	0			REV__ENSG00000197241|ENST00000400906|SLC2A7	REV__ENSG00000197241|ENST00000400906|SLC2A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.790771484375	2	464.789318	927.564084	-0.072724	-3.3801E-05	3.0915	0.0014369	3.0188	0.0014031	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.7932	1	2154	2154		24.203	0	1	297050	+		53251	23211	35548	35561	60294	60294					0.09740412734140591
SDVLLGVLL	9	Unmodified	_SDVLLGVLL_					0	0	0			REV__ENSG00000197241|ENST00000400906|SLC2A7	REV__ENSG00000197241|ENST00000400906|SLC2A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.790771484375	2	464.789318	927.564084	-1.1101	-0.00051598	3.984	0.0018517	2.8738	0.0013357	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.78058	1	2159	2159		30.504	2.2494	1	415400	+		53252	23211	35548	35561	60295	60295					0.09740412734140591
SDVLLGVLL	9	Unmodified	_SDVLLGVLL_					0	0	0			REV__ENSG00000197241|ENST00000400906|SLC2A7	REV__ENSG00000197241|ENST00000400906|SLC2A7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.7907409667969	2	464.789318	927.564084	0.2474	0.00011499	2.8684	0.0013332	3.1158	0.0014482	464.7904221539816	34.07	1.6806	34.28	33.524	35.204	0.21003					97	40	4	0	0	0	0.7932	1	2542	2542		24.203	1.1603	1	944210	+		53253	23211	35548	35561	60296	60296					0.09740412734140591
SDVLVPSSV	9	Unmodified	_SDVLVPSSV_					0	0	0		ENST00000568207.5_1_15:75315958-75337059:+|nuORF	ENST00000568207.5_1_15:75315958-75337059:+|nuORF	ENST00000568207.5_1_15:75315958-75337059:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.74676513671875	2	451.745108	901.475663	-0.34142	-0.00015424	1.894	0.00085561	1.5526	0.00070137	451.7457899922303	34.694	1.135	34.701	34.293	35.428	0.0063934					58	27	3	0	0	0	0.76255	1	2173	2173		35.618	2.1027	1	280890			53254	13956	35549	35562	60297	60297					0.020983724236771195
SDWEVDDL	8	Unmodified	_SDWEVDDL_					0	0	0		nc|ENSG00000107175|O43889-3|CREB3;ENSG00000107175|ENST00000353704|CREB3;ENST00000486056.1_1_9:35732760-35733244:+|nuORF	nc|ENSG00000107175|O43889-3|CREB3	nc|ENSG00000107175|O43889-3|CREB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.7061767578125	2	489.70618	977.397806	1.0396	0.0005091	-1.9901	-0.00097458	-0.95053	-0.00046548	489.70511570199415	95.565	1.4051	95.985	95.664	97.069	0.42051					50	33	2	0	0	0	0.87479	1	11438	11438		30.504	1.3541	1	732140			53255	2332	35550	35563	60298	60298					-0.09179685232379597
SDWLLLVLI	9	Unmodified	_SDWLLLVLI_					0	0	0		nc|ENSG00000133106|Q96J88-3|EPSTI1	nc|ENSG00000133106|Q96J88-3|EPSTI1	nc|ENSG00000133106|Q96J88-3|EPSTI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.3214721679688	2	536.326068	1070.63758	-0.53222	-0.00028544	-2.87	-0.0015393	-3.4022	-0.0018247	536.3243058364883	70.468	0.83177	71.016	70.617	71.449	0.54756					43	20	3	0	0	0	0.18566	1	7825	7825		76.847	13.313	1	301740			53256	14926	35551	35564	60299	60299					0.10508961176606135
SDYELSLDL	9	Unmodified	_SDYELSLDL_					0	0	0		ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.906494140625	2	527.750587	1053.48662	0.21064	0.00011117	-2.9373	-0.0015501	-2.7266	-0.001439	527.7489766739305	27.971	0.53651	27.932	27.673	28.209	-0.038525					23	11	3	0	0	0	0.20789	1	1349	1349		42.396	0	1	58627			53257	3139	35552	35565	60300	60300					-0.03798269992694259
SEAANRNNDAL	11	Unmodified	_SEAANRNNDAL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.7759399414062	2	587.77599	1173.53743	-0.25248	-0.0001484	0.58954	0.00034652	0.33706	0.00019811	587.7762310380062	25.416	0.81987	25.095	24.711	25.53	-0.32099					46	18	4	0	0	0	1.8342E-13	4	1313	1292;1300;1313;1327		157.34	85.467	1	1502600			53258	869	35553	35566	60301;60302;60303;60304	60303					-0.04239927895150686
SEAANRNNDAL	11	Unmodified	_SEAANRNNDAL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000421459.2_2_10:17272631-17276850:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.7760009765625	2	587.77599	1173.53743	2.5398	0.0014928	-2.362	-0.0013883	0.17783	0.00010452	587.7744834840996	25.437	1.0304	25.006	24.408	25.439	-0.4311					60	23	4	0	0	0	7.0666E-39	4	1321	1300;1309;1321;1335		191.45	118.57	1	1460100			53259	869	35553	35566	60305;60306;60307;60308	60307					-0.04239927895150686
SEAATAQREEW	11	Unmodified	_SEAATAQREEW_					0	0	0		nc|ENSG00000138668|Q14103-3|HNRNPD;ENSG00000138668|ENST00000313899|HNRNPD	nc|ENSG00000138668|Q14103-3|HNRNPD	nc|ENSG00000138668|Q14103-3|HNRNPD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	639.2905883789062	2	639.291473	1276.56839	0.094524	6.0429E-05	-0.102	-6.5208E-05	-0.007476	-4.7794E-06	639.2911071728256	38.018	0.56495	37.991	37.696	38.261	-0.027843					28	12	3	0	0	0	0.32604	3	2553	2541;2553;2566		68.626	33.474	1	167530			53260	4316	35554	35567	60309;60310;60311	60310					-0.05882774580913974
SEAATAQREEW	11	Unmodified	_SEAATAQREEW_					0	0	0		nc|ENSG00000138668|Q14103-3|HNRNPD;ENSG00000138668|ENST00000313899|HNRNPD	nc|ENSG00000138668|Q14103-3|HNRNPD	nc|ENSG00000138668|Q14103-3|HNRNPD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	639.2926025390625	2	639.291473	1276.56839	-1.0967	-0.00070112	1.1675	0.00074635	0.070757	4.5234E-05	639.2921124375476	37.963	0.65377	37.912	37.673	38.326	-0.050369					31	14	3	0	0	0	0.10529	2	2629	2629;2642		92.239	48.588	1	204630			53261	4316	35554	35567	60312;60313	60312					-0.05882774580913974
SEAATAQREEW	11	Unmodified	_SEAATAQREEW_					0	0	0		nc|ENSG00000138668|Q14103-3|HNRNPD;ENSG00000138668|ENST00000313899|HNRNPD	nc|ENSG00000138668|Q14103-3|HNRNPD	nc|ENSG00000138668|Q14103-3|HNRNPD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	639.2916259765625	2	639.291473	1276.56839	-0.79974	-0.00051127	0.71955	0.00046	-0.08019	-5.1265E-05	639.2918676745957	37.933	0.57217	37.944	37.635	38.207	0.011173					28	12	4	0	0	0	0.0055902	2	2563	2563;2577		112.3	59.359	1	186240			53262	4316	35554	35567	60314;60315	60314					-0.05882774580913974
SEAAYKEAF	9	Unmodified	_SEAAYKEAF_					0	0	0		ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENSG00000128245|ENST00000248975|YWHAH	ENST00000397492.1_1_22:32346295-32352776:+|nuORF	ENST00000397492.1_1_22:32346295-32352776:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.23968505859375	2	508.24019	1014.46583	0.33613	0.00017083	-1.4594	-0.0007417	-1.1232	-0.00057087	508.2393753391124	41.524	0.50989	41.493	41.236	41.746	-0.030991					20	12	2	0	0	0	0.29259	1	3039	3039		65.465	21.349	1	224650			53263	11153	35555	35568	60316	60316					-0.04082815581716659
SEAAYKEAF	9	Unmodified	_SEAAYKEAF_					0	0	0		ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENSG00000128245|ENST00000248975|YWHAH	ENST00000397492.1_1_22:32346295-32352776:+|nuORF	ENST00000397492.1_1_22:32346295-32352776:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2388916015625	2	508.24019	1014.46583	-1.0081	-0.00051235	-0.21841	-0.000111	-1.2265	-0.00062335	508.2398804839846	41.451	0.51683	41.411	41.215	41.732	-0.04081					26	12	3	0	0	0	0.17181	1	3125	3125		79.713	26.361	1	186540			53264	11153	35555	35568	60317	60317					-0.04082815581716659
SEAAYKEAF	9	Unmodified	_SEAAYKEAF_					0	0	0		ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENSG00000128245|ENST00000248975|YWHAH	ENST00000397492.1_1_22:32346295-32352776:+|nuORF	ENST00000397492.1_1_22:32346295-32352776:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.24078369140625	2	508.24019	1014.46583	-1.5918	-0.000809	0.39644	0.00020148	-1.1953	-0.00060752	508.24022096451836	41.47	0.4958	41.474	41.256	41.752	0.0040474					26	11	3	0	0	0	0.26953	3	3051	3051;3060;3074		67.494	14.142	1	302050			53265	11153	35555	35568	60318;60319;60320	60318					-0.04082815581716659
SEAEHQRAYL	10	Unmodified	_SEAEHQRAYL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	602.2910766601562	2	602.291276	1202.568	-0.12409	-7.474E-05	0.52846	0.00031829	0.40437	0.00024355	602.2912929031069	28.42	0.5747	28.323	28.094	28.669	-0.096947					25	13	3	0	0	0	0.63899	1	1718	1718		47.96	0.30219	1	152770			53266	8464	35556	35569	60321	60321					-0.025181495100923712
SEAEHQRAYL	10	Unmodified	_SEAEHQRAYL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	602.291276	1202.568	0.81411	0.00049033	-0.95709	-0.00057645	-0.14298	-8.6117E-05	602.2906276618733	28.55	0.42531	28.377	28.122	28.547	-0.17336	0.026789	-0.00090766	NaN	47.96	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173940			53267	8464	35556	35569							-0.025181495100923712
SEAEQTLRF	9	Unmodified	_SEAEQTLRF_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|O94854|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.7691040039062	2	540.769645	1079.52474	-0.032445	-1.7545E-05	-0.44358	-0.00023988	-0.47603	-0.00025742	540.769296893493	48.61	0.74474	48.605	48.3	49.045	-0.0056419					43	16	4	0	0	0	3.7454E-20	4	4018	4007;4018;4029;4041		176.09	59.183	1	448820			53268	3510	35557	35570	60322;60323;60324;60325	60323					-0.011843392873743142
SEAEQTLRF	9	Unmodified	_SEAEQTLRF_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|O94854|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.7689819335938	2	540.769645	1079.52474	0.098943	5.3505E-05	-0.67664	-0.00036591	-0.5777	-0.0003124	540.7691932397225	48.556	0.65592	48.531	48.226	48.882	-0.025116					36	14	3	0	0	0	0.017216	4	4117	4094;4105;4117;4131		127.46	45.221	1	550240			53269	3510	35557	35570	60326;60327;60328;60329	60328					-0.011843392873743142
SEAEQTLRF	9	Unmodified	_SEAEQTLRF_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|O94854|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.7697143554688	2	540.769645	1079.52474	0.40829	0.00022079	-0.95091	-0.00051423	-0.54263	-0.00029344	540.7690360290148	48.641	0.73702	48.641	48.319	49.056	0.00016785					47	16	4	0	0	0	0.017216	3	4055	4043;4055;4067		127.46	53.207	1	573980			53270	3510	35557	35570	60330;60331;60332	60331					-0.011843392873743142
SEAGSHTLQW	10	Unmodified	_SEAGSHTLQW_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.2593383789062	2	558.259445	1114.50434	-0.77269	-0.00043136	0.63455	0.00035424	-0.13814	-7.7115E-05	558.2596940825973	46.99	0.84644	46.976	46.614	47.461	-0.013821					51	22	3	0	0	0	0.017804	5	3784	3776;3784;3796;3807;3819		124.08	43.625	1	933770			53271	8464	35558	35571	60333;60334;60335;60336;60337	60334					-0.04833509947184211
SEAGSHTLQW	10	Unmodified	_SEAGSHTLQW_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.259521484375	2	558.259445	1114.50434	-0.39145	-0.00021853	0.29077	0.00016232	-0.10068	-5.6205E-05	558.2595121944665	46.898	0.88573	46.871	46.551	47.436	-0.026871					52	22	4	0	0	0	0.014926	5	3878	3866;3878;3889;3901;3914		127.46	38.919	1	1056500			53272	8464	35558	35571	60338;60339;60340;60341;60342	60339					-0.04833509947184211
SEAGSHTLQW	10	Unmodified	_SEAGSHTLQW_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.259521484375	2	558.259445	1114.50434	0.48192	0.00026903	-0.61806	-0.00034504	-0.13614	-7.6003E-05	558.2589699137421	46.954	0.78132	46.95	46.68	47.461	-0.0041618					48	19	3	0	0	0	0.0037703	4	3827	3804;3815;3827;3839		136.27	45.898	1	1051900			53273	8464	35558	35571	60343;60344;60345;60346	60345					-0.04833509947184211
SEAHSALEP	9	Unmodified	_SEAHSALEP_					0	0	0		ENST00000404625.5_1_7:22766799-22767201:+|nuORF;ENST00000401651.5_1_7:22766799-22768369:+|nuORF	ENST00000404625.5_1_7:22766799-22767201:+|nuORF	ENST00000404625.5_1_7:22766799-22767201:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7672424316406	2	470.722164	939.429775	-1.9255	-0.0009064	2.1175	0.00099677	0.19198	9.0371E-05	470.7230496849371	30.862	0.5553	30.862	30.616	31.171	0					26	18	2	0	0	0	0.20789	1	1418	1418		37.159	3.6435	1	71143			53274	11259	35559	35572	60347	60347					-0.042362727585668836
SEALALTQTW	10	Unmodified	_SEALALTQTW_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.2881469726562	2	560.287671	1118.56079	-1.1272	-0.00063153	1.2733	0.00071341	0.14613	8.1875E-05	560.2882669932782	78.496	1.0533	78.552	78.241	79.294	0.056114					77	30	4	0	0	0	0.31985	2	7630	7612;7630		70.816	19.624	1	910100			53275	8464	35560	35573	60348;60349	60349					0.0062511788946721936
SEALALTQTW	10	Unmodified	_SEALALTQTW_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.28759765625	2	560.287671	1118.56079	0.42319	0.00023711	-0.33828	-0.00018954	0.084908	4.7573E-05	560.2873712822919	78.48	0.92073	78.426	78.068	78.989	-0.053558					67	24	4	0	0	0	0.16557	2	7822	7822;7844		93.143	26.181	1	844600			53276	8464	35560	35573	60350;60351	60350					0.0062511788946721936
SEALALTQTW	10	Unmodified	_SEALALTQTW_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.2877807617188	2	560.287671	1118.56079	0.66776	0.00037414	-0.49396	-0.00027676	0.17379	9.7375E-05	560.287268376834	78.313	1.0768	78.365	78.021	79.097	0.051674					72	31	4	0	0	0	0.44803	3	7695	7685;7695;7728		60.118	16.001	1	833690			53277	8464	35560	35573	60352;60353;60354	60353					0.0062511788946721936
SEAPAMPH	8	Unmodified	_SEAPAMPH_					0	0	0			REV__ENST00000245543.5_1_17:73125797-73126031:+|nuORF	REV__ENST00000245543.5_1_17:73125797-73126031:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.1900939941406	2	420.189445	838.364338	2.2428	0.0009424	2.6066	0.0010953	4.8494	0.0020377	420.1904683108371	104.02	1.236	104.21	103.72	104.96	0.18887					48	30	2	0	0	0	0.87276	1	12648	12648		29.842	8.1392	1	319160	+		53278	24254	35561	35574	60355	60355					-0.061309654852720996
SEAPAMPH	8	Unmodified	_SEAPAMPH_					0	0	0			REV__ENST00000245543.5_1_17:73125797-73126031:+|nuORF	REV__ENST00000245543.5_1_17:73125797-73126031:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.19110107421875	2	420.189445	838.364338	3.5406	0.0014877	1.2522	0.00052616	4.7928	0.0020139	420.18983474764957	103.98	1.2165	104.24	103.8	105.01	0.26524					48	28	2	0	0	0	0.90024	1	12677	12677		39.021	10.767	1	309010	+		53279	24254	35561	35574	60356	60356					-0.061309654852720996
SEAPAMPH	8	Unmodified	_SEAPAMPH_					0	0	0			REV__ENST00000245543.5_1_17:73125797-73126031:+|nuORF	REV__ENST00000245543.5_1_17:73125797-73126031:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	420.189445	838.364338	2.2428	0.0009424	2.6066	0.0010953	4.8494	0.0020377	420.1904683108371	104.02	1.236	104.21	103.72	104.96	0.18887	-0.018934	0.00043399	NaN	29.842	48	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	319160	+		53280	24254	35561	35574							-0.061309654852720996
SEAPAMPH	8	Unmodified	_SEAPAMPH_					0	0	0			REV__ENST00000245543.5_1_17:73125797-73126031:+|nuORF	REV__ENST00000245543.5_1_17:73125797-73126031:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	420.189445	838.364338	3.5406	0.0014877	1.2522	0.00052616	4.7928	0.0020139	420.18983474764957	103.98	1.2165	104.24	103.8	105.01	0.26524	0.018934	-0.00070422	NaN	29.842	48	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	309010	+		53281	24254	35561	35574							-0.061309654852720996
SEAWRGISG	9	Unmodified	_SEAWRGISG_					0	0	0		chr6:80226939-80273135|14|19.29|0.05|8.47|+|1|TE_info:MIR1_Amn,MIR1_Amn_dup4081,MIR,SINE,donor,+,80226858,80226939|None,BCKDHB|1	chr6:80226939-80273135|14|19.29|0.05|8.47|+|1|TE_info:MIR1_Amn,MIR1_Amn_dup4081,MIR,SINE,donor,+,80226858,80226939|None,BCKDHB|1	chr6:80226939-80273135|14|19.29|0.05|8.47|+|1|TE_info:MIR1_Amn,MIR1_Amn_dup4081,MIR,SINE,donor,+,80226858,80226939|None,BCKDHB|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.73773193359375	2	481.738148	961.461744	-1.1921	-0.00057428	1.3734	0.00066164	0.18133	8.7354E-05	481.7386430281535	30.761	0.48761	30.751	30.514	31.001	-0.010656					20	12	2	0	0	0	0.51307	1	1632	1632		51.335	1.3109	1	52362			53282	485	35562	35575	60357	60357					-0.020528602847548427
SEDEIKKAY	9	Unmodified	_SEDEIKKAY_					0	0	0		nc|ENSG00000168259|Q99615-2|DNAJC7;ENSG00000168259|ENST00000457167|DNAJC7	nc|ENSG00000168259|Q99615-2|DNAJC7	nc|ENSG00000168259|Q99615-2|DNAJC7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.7709350585938	2	541.771854	1081.52915	0.2939	0.00015922	-0.39391	-0.00021341	-0.10001	-5.4183E-05	541.771645970913	27.684	0.40415	27.723	27.445	27.849	0.039288					16	11	2	0	0	0	0.69624	1	1268	1268		40.778	2.9666	1	45384			53283	6384	35563	35576	60358	60358					-0.0083487486449485
SEDEPTRSL	9	Unmodified	_SEDEPTRSL_					0	0	0		ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;ENSG00000105576|ENST00000425528|TNPO2;ENST00000589956.5_1_19:12822112-12831764:-|nuORF;nc|ENSG00000083312|Q92973-2|TNPO1;ENSG00000083312|ENST00000337273|TNPO1	ENST00000588484.1_1_19:12826020-12830096:-|nuORF	ENST00000588484.1_1_19:12826020-12830096:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.242431640625	2	517.24346	1032.47237	0.16158	8.3577E-05	0.42534	0.00022	0.58692	0.00030358	517.2435463550286	32.148	0.68988	32.275	31.988	32.677	0.12643					44	15	4	0	0	0	0.052654	4	2222	2210;2222;2234;2247		106.68	27.766	1	1147000			53284	2227	35564	35577	60359;60360;60361;60362	60360					-0.04256922420995579
SEDEPTRSL	9	Unmodified	_SEDEPTRSL_					0	0	0		ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;ENSG00000105576|ENST00000425528|TNPO2;ENST00000589956.5_1_19:12822112-12831764:-|nuORF;nc|ENSG00000083312|Q92973-2|TNPO1;ENSG00000083312|ENST00000337273|TNPO1	ENST00000588484.1_1_19:12826020-12830096:-|nuORF	ENST00000588484.1_1_19:12826020-12830096:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.24267578125	2	517.24346	1032.47237	0.61018	0.00031561	-0.0904	-4.6759E-05	0.51978	0.00026885	517.2432791772354	32.105	0.73021	32.212	31.845	32.575	0.10707					46	16	4	0	0	0	0.052654	5	2235	2223;2235;2246;2258;2271		106.68	32.428	1	1175800			53285	2227	35564	35577	60363;60364;60365;60366;60367	60364					-0.04256922420995579
SEDEVKLAL	9	Unmodified	_SEDEVKLAL_					0	0	0		ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000514332.5_1_5:179048171-179050134:-|nuORF;ENST00000513972.5_1_5:179047887-179050134:-|nuORF;ENST00000524180.5_1_5:179047015-179050134:-|nuORF	ENSG00000169045|ENST00000393432|HNRNPH1	ENSG00000169045|ENST00000393432|HNRNPH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.269287109375	2	502.268947	1002.52334	-0.01733	-8.7044E-06	-0.091894	-4.6156E-05	-0.10922	-5.486E-05	502.26880511946706	54.873	0.92301	55.28	54.948	55.871	0.40663					52	21	4	0	0	0	0.034797	2	5596	5596;5608		115.49	36.043	1	2048500			53286	6463	35565	35578	60368;60369	60368					0.022180266238478907
SEDEVKLAL	9	Unmodified	_SEDEVKLAL_					0	0	0		ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000514332.5_1_5:179048171-179050134:-|nuORF;ENST00000513972.5_1_5:179047887-179050134:-|nuORF;ENST00000524180.5_1_5:179047015-179050134:-|nuORF	ENSG00000169045|ENST00000393432|HNRNPH1	ENSG00000169045|ENST00000393432|HNRNPH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.26922607421875	2	502.268947	1002.52334	0.081047	4.0707E-05	-0.12601	-6.329E-05	-0.044962	-2.2583E-05	502.26874477990367	54.664	0.88256	55.233	54.901	55.783	0.56836					53	20	4	0	0	0	2.7574E-05	2	5592	5592;5604		153.04	48.289	1	2223500			53287	6463	35565	35578	60370;60371	60370					0.022180266238478907
SEDGDTLVHL	10	Unmodified	_SEDGDTLVHL_					0	0	0		ENSG00000146232|ENST00000619360|NFKBIE;nc|ENSG00000146232|O00221|NFKBIE	ENSG00000146232|ENST00000619360|NFKBIE	ENSG00000146232|ENST00000619360|NFKBIE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2565307617188	2	543.259111	1084.50367	-0.12674	-6.8853E-05	0.058326	3.1686E-05	-0.068415	-3.7167E-05	543.2590339904477	54.699	0.62938	55.105	54.781	55.411	0.40663					35	14	3	0	0	0	0.20477	1	5586	5586		84.916	24.622	1	774780			53288	4827	35566	35579	60372	60372					-0.0352034938689485
SEDGDTLVHL	10	Unmodified	_SEDGDTLVHL_					0	0	0		ENSG00000146232|ENST00000619360|NFKBIE;nc|ENSG00000146232|O00221|NFKBIE	ENSG00000146232|ENST00000619360|NFKBIE	ENSG00000146232|ENST00000619360|NFKBIE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.2568359375	2	543.259111	1084.50367	-0.67238	-0.00036528	0.51176	0.00027802	-0.16062	-8.7258E-05	543.2593108514465	54.448	0.67265	55.033	54.79	55.463	0.58474					36	15	3	0	0	0	0.26188	1	5571	5571		76.774	16.48	1	840750			53289	4827	35566	35579	60373	60373					-0.0352034938689485
SEDGTVRLW	9	Unmodified	_SEDGTVRLW_					0	0	0		ENSG00000148835|ENST00000369839|TAF5	ENSG00000148835|ENST00000369839|TAF5	ENSG00000148835|ENST00000369839|TAF5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.2645874023438	2	531.764363	1061.51417	0.18104	9.6273E-05	1.0949	0.00058224	1.276	0.00067851	531.7643076321863	55.393	1.0186	55.366	55.062	56.081	-0.027279					62	26	4	0	0	0	0.20789	1	5056	5056		64.207	0	1	241390			53290	4984	35567	35580	60374	60374					-0.01412321941825212
SEDKKNIIL	9	Unmodified	_SEDKKNIIL_					0	0	0		ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF	ENSG00000172757|ENST00000308162|CFL1	ENSG00000172757|ENST00000308162|CFL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.3056030273438	2	530.305864	1058.59717	1.1583	0.00061427	-1.6139	-0.00085585	-0.45555	-0.00024158	530.305016522637	33.712	1.7834	33.882	33.229	35.013	0.16971					101	42	4	0	0	0	0.0018445	6	2449	2426;2437;2449;2461;2473;2486		143.11	22.486	1	11581000			53291	6791	35568	35581	60375;60376;60377;60378;60379;60380	60377					0.07021994786191499
SEDKKNIIL	9	Unmodified	_SEDKKNIIL_					0	0	0		ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF	ENSG00000172757|ENST00000308162|CFL1	ENSG00000172757|ENST00000308162|CFL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.3057250976562	2	530.305864	1058.59717	1.1047	0.00058581	-1.618	-0.00085803	-0.51333	-0.00027222	530.3050002270816	33.673	1.5219	33.978	33.575	35.097	0.30495					102	36	4	0	0	0	6.1523E-05	6	2461	2438;2449;2461;2473;2486;2498		148.04	18.513	1	12694000			53292	6791	35568	35581	60381;60382;60383;60384;60385;60386	60383					0.07021994786191499
SEDKQVKII	9	Unmodified	_SEDKQVKII_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.3056640625	2	530.305864	1058.59717	1.1583	0.00061427	-1.6139	-0.00085585	-0.45555	-0.00024158	530.305016522637	33.712	1.7834	33.882	33.229	35.013	0.16971					101	42	4	0	0	0	0.18601	1	2417	2417		76.774	0	1	11581000	+		53293	23285	35569	35582	60387	60387					0.07021994786191499
SEDNRILLW	9	Unmodified	_SEDNRILLW_					0	0	0		nc|ENSG00000116455|Q9BQA1-2|WDR77;ENSG00000116455|ENST00000235090|WDR77	nc|ENSG00000116455|Q9BQA1-2|WDR77	nc|ENSG00000116455|Q9BQA1-2|WDR77	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.3009643554688	2	573.301113	1144.58767	-0.43257	-0.000248	1.0541	0.00060432	0.62153	0.00035633	573.3015257531335	72.569	0.63763	72.529	72.246	72.883	-0.04039					52	22	3	0	0	0	0.44421	1	7101	7101		54.776	7.119	1	243080			53294	2920	35570	35583	60388	60388					0.021162265006751113
SEDNRILLW	9	Unmodified	_SEDNRILLW_					0	0	0		nc|ENSG00000116455|Q9BQA1-2|WDR77;ENSG00000116455|ENST00000235090|WDR77	nc|ENSG00000116455|Q9BQA1-2|WDR77	nc|ENSG00000116455|Q9BQA1-2|WDR77	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.3008422851562	2	573.301113	1144.58767	0.13285	7.6165E-05	0.42023	0.00024092	0.55308	0.00031708	573.3010736764967	72.451	0.62146	72.493	72.174	72.796	0.042114					59	27	3	0	0	0	0.24527	2	6971	6963;6971		69.628	6.3214	1	200220			53295	2920	35570	35583	60389;60390	60390					0.021162265006751113
SEDPSHPSM	9	Unmodified	_SEDPSHPSM_					0	0	0		ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4	ENSG00000111642|ENST00000544040|CHD4	ENSG00000111642|ENST00000544040|CHD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.6978454589844	2	493.697832	985.38111	-1.1136	-0.00054978	1.0027	0.00049501	-0.11095	-5.4774E-05	493.69821684925455	31.381	1.5213	31.461	30.678	32.199	0.079834					90	34	5	0	0	0	0.014285	7	2119	2084;2095;2107;2119;2131;2143;2169		129.68	52.836	1	3234700			53296	2592	35571	35584	60391;60392;60393;60394;60395;60396;60397	60394					-0.11216509389964813
SEDPSHPSM	9	Unmodified	_SEDPSHPSM_					0	0	0		ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4	ENSG00000111642|ENST00000544040|CHD4	ENSG00000111642|ENST00000544040|CHD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.6974792480469	2	493.697832	985.38111	0.16233	8.014E-05	-0.38954	-0.00019231	-0.22721	-0.00011217	493.69751957924177	31.324	1.503	31.328	30.796	32.299	0.0037212					89	34	4	0	0	0	0.0092756	7	2137	2103;2113;2125;2137;2150;2162;2175		133.81	55.428	1	3976300			53297	2592	35571	35584	60398;60399;60400;60401;60402;60403;60404	60401					-0.11216509389964813
SEDPVRLL	8	Unmodified	_SEDPVRLL_					0	0	0			REV__ENST00000503808.5_1_4:57204874-57250274:-|nuORF	REV__ENST00000503808.5_1_4:57204874-57250274:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.7582092285156	2	464.758549	927.502546	0.23835	0.00011077	-0.44626	-0.0002074	-0.20791	-9.6628E-05	464.7583607779337	33.68	0.79133	33.849	33.568	34.36	0.16971					52	18	4	0	0	0	0.36381	3	2464	2428;2451;2464		96.19	11.275	1	1274300	+		53298	20543	35572	35585	60405;60406;60407	60407					0.03589481034862274
SEDPVRLL	8	Unmodified	_SEDPVRLL_					0	0	0			REV__ENST00000503808.5_1_4:57204874-57250274:-|nuORF	REV__ENST00000503808.5_1_4:57204874-57250274:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.75799560546875	2	464.758549	927.502546	0.82813	0.00038488	-0.78159	-0.00036325	0.046535	2.1627E-05	464.75800958652354	33.711	0.74689	34.016	33.66	34.406	0.30495					53	17	4	0	0	0	0.42407	1	2467	2467		79.451	7.5735	1	1292900	+		53299	20543	35572	35585	60408	60408					0.03589481034862274
SEDPVRLL	8	Unmodified	_SEDPVRLL_					0	0	0			REV__ENST00000503808.5_1_4:57204874-57250274:-|nuORF	REV__ENST00000503808.5_1_4:57204874-57250274:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.79052734375	2	464.758549	927.502546	0.82813	0.00038488	-0.78159	-0.00036325	0.046535	2.1627E-05	464.75800958652354	33.711	0.74689	34.016	33.66	34.406	0.30495					53	17	4	0	0	0	0.4196	1	2480	2480		99.375	19.924	1	1292900	+		53300	20543	35572	35585	60409	60409					0.03589481034862274
SEDSSNVVHL	10	Unmodified	_SEDSSNVVHL_					0	0	0		ENSG00000160255|ENST00000652462|ITGB2	ENSG00000160255|ENST00000652462|ITGB2	ENSG00000160255|ENST00000652462|ITGB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.7554931640625	2	543.756735	1085.49892	-1.5561	-0.00084614	-0.8191	-0.00044539	-2.3752	-0.0012915	543.7561983025064	43.259	0.84497	43.693	43.378	44.223	0.4334					57	20	5	0	0	0	1.7249E-70	2	3890	3890;3901		219.56	123.75	1	6707200			53301	5573	35573	35586	60410;60411	60410					-0.04041233529665078
SEDSSNVVHL	10	Unmodified	_SEDSSNVVHL_					0	0	0		ENSG00000160255|ENST00000652462|ITGB2	ENSG00000160255|ENST00000652462|ITGB2	ENSG00000160255|ENST00000652462|ITGB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.4945068359375	2	543.756735	1085.49892	-2.1365	-0.0011617	0.29197	0.00015876	-1.8445	-0.001003	543.7568022294057	43.072	0.88472	43.846	43.54	44.424	0.7738					55	21	4	0	0	0	0.010628	1	3873	3873		132.76	68.551	1	6751300			53302	5573	35573	35586	60412	60412					-0.04041233529665078
SEDTSSLFDKL	11	Unmodified	_SEDTSSLFDKL_					0	0	0		ENST00000555014.1_1_14:62203625-62207292:+|nuORF;nc|ENSG00000100644|Q16665-2|HIF1A;ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A	ENST00000555014.1_1_14:62203625-62207292:+|nuORF	ENST00000555014.1_1_14:62203625-62207292:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	621.2958374023438	2	621.298433	1240.58231	0.87998	0.00054673	-1.3413	-0.00083334	-0.46131	-0.00028661	621.2972733749671	67.159	0.5564	67.544	67.269	67.825	0.38515					29	16	2	0	0	0	0.31569	1	7367	7367		72.243	15.809	1	441720			53303	1857	35574	35587	60413	60413					-0.028355418724686388
SEDTSSLFDKL	11	Unmodified	_SEDTSSLFDKL_					0	0	0		ENST00000555014.1_1_14:62203625-62207292:+|nuORF;nc|ENSG00000100644|Q16665-2|HIF1A;ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A	ENST00000555014.1_1_14:62203625-62207292:+|nuORF	ENST00000555014.1_1_14:62203625-62207292:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	621.298433	1240.58231	0.55392	0.00034415	-1.039	-0.00064552	-0.48507	-0.00030138	621.2975378054612	67.063	0.58991	67.614	67.351	67.941	0.55071	0.034717	0.00028251	NaN	72.243	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	489260			53304	1857	35574	35587							-0.028355418724686388
SEDYFHHNTL	10	Unmodified	_SEDYFHHNTL_					0	0	0			REV__nc|ENSG00000130175|P14314-2|PRKCSH	REV__nc|ENSG00000130175|P14314-2|PRKCSH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.5202941894531	3	421.519398	1261.53637	2.3072	0.00097253	0.83431	0.00035168	3.1415	0.0013242	421.5196057482199	31.372	0.62619	31.361	31.093	31.719	-0.010656					32	14	3	0	0	0	0.86106	1	1693	1693		33.922	6.8743	1	102480	+		53305	18854	35575	35588	60414	60414					-0.08394142264046422
SEEDLKVLF	9	Unmodified	_SEEDLKVLF_					0	0	0		nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:807712-810823:+|nuORF	nc|ENSG00000011304|P26599-1|PTBP1;ENST00000586944.5_1_19:807712-810823:+|nuORF	nc|ENSG00000011304|P26599-1|PTBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.2841796875	2	540.284597	1078.55464	-0.19533	-0.00010554	0.36705	0.00019831	0.17172	9.2778E-05	540.2845896433937	68.977	1.1608	69.361	68.611	69.771	0.38416					64	27	4	0	0	0	0.029359	2	7595	7595;7608		118.74	52.314	1	971050			53306	787;14181	35576	35589	60415;60416	60415					0.018505996579506245
SEEDLKVLF	9	Unmodified	_SEEDLKVLF_					0	0	0		nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:807712-810823:+|nuORF	nc|ENSG00000011304|P26599-1|PTBP1;ENST00000586944.5_1_19:807712-810823:+|nuORF	nc|ENSG00000011304|P26599-1|PTBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.2841796875	2	540.284597	1078.55464	-0.63707	-0.0003442	0.77092	0.00041652	0.13385	7.2317E-05	540.2848255109873	68.868	1.0854	69.415	68.782	69.868	0.54693					67	25	4	0	0	0	0.012649	2	7606	7606;7623		131.03	26.285	1	894080			53307	787;14181	35576	35589	60417;60418	60417					0.018505996579506245
SEEEASINL	9	Unmodified	_SEEEASINL_					0	0	0		nc|ENSG00000149925|P04075|ALDOA;ENSG00000149925|ENST00000642816|ALDOA	nc|ENSG00000149925|P04075|ALDOA	nc|ENSG00000149925|P04075|ALDOA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.2324523925781	2	496.232561	990.45057	-0.41127	-0.00020408	-0.20861	-0.00010352	-0.61987	-0.0003076	496.2326432735904	55.885	0.52616	56.286	55.949	56.475	0.40101					28	13	3	0	0	0	0.36616	1	5762	5762		60.118	1.3363	1	648790			53308	5053	35577	35590	60419	60419					-0.04503727169571903
SEEEEPDDGW	10	Unmodified	_SEEEEPDDGW_					0	0	0		ENSG00000188816|ENST00000339992|HMX2	ENSG00000188816|ENST00000339992|HMX2	ENSG00000188816|ENST00000339992|HMX2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.7169189453125	2	596.717473	1191.42039	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.887	1	26.915	26.415	27.415	0.02817								0	0	0	0.45132	1	1048	1048		14.865	0.72775	1				53309	7962	35578	35591	60420	60420					-0.1676613062541037
SEEEVKLAL	9	Unmodified	_SEEEVKLAL_					0	0	0		ENSG00000126945|ENST00000316594|HNRNPH2	ENSG00000126945|ENST00000316594|HNRNPH2	ENSG00000126945|ENST00000316594|HNRNPH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2762756347656	2	509.276772	1016.53899	0.50654	0.00025797	-0.78578	-0.00040018	-0.27924	-0.00014221	509.2762802437961	54.007	0.54589	54.413	54.111	54.657	0.40663					28	12	3	0	0	0	0.2083	1	5484	5484		72.879	0	1	582400			53310	3480	35579	35592	60421	60421					0.031383131409029374
SEEEVKLAL	9	Unmodified	_SEEEVKLAL_					0	0	0		ENSG00000126945|ENST00000316594|HNRNPH2	ENSG00000126945|ENST00000316594|HNRNPH2	ENSG00000126945|ENST00000316594|HNRNPH2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	509.276772	1016.53899	0.34879	0.00017763	-0.42697	-0.00021745	-0.078183	-3.9817E-05	509.2764857293776	53.771	0.70936	54.356	54.081	54.79	0.58474	-0.028568	0.00019361	NaN	72.879	33	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	446360			53311	3480	35579	35592							0.031383131409029374
SEEGITKSTL	10	Unmodified	_SEEGITKSTL_					0	0	0		nc|ENSG00000108312|P17480-2|UBTF;ENSG00000108312|ENST00000436088|UBTF	nc|ENSG00000108312|P17480-2|UBTF	nc|ENSG00000108312|P17480-2|UBTF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.7772827148438	2	532.777136	1063.53972	0.65646	0.00034975	-0.78303	-0.00041718	-0.12657	-6.7434E-05	532.7766172320859	37.33	0.83412	37.643	37.329	38.163	0.31312					53	20	4	0	0	0	0.00042441	3	2986	2975;2986;2998		142.36	54.184	1	1747100			53312	2398	35580	35593	60422;60423;60424	60423					0.010491077899814627
SEEGITKSTL	10	Unmodified	_SEEGITKSTL_					0	0	0		nc|ENSG00000108312|P17480-2|UBTF;ENSG00000108312|ENST00000436088|UBTF	nc|ENSG00000108312|P17480-2|UBTF	nc|ENSG00000108312|P17480-2|UBTF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.7772827148438	2	532.777136	1063.53972	0.54012	0.00028776	-0.59741	-0.00031828	-0.05729	-3.0523E-05	532.7767727935558	37.24	1.1517	37.726	37.325	38.476	0.48581					55	28	3	0	0	0	9.3456E-07	3	2997	2975;2986;2997		148.69	60.513	1	1899700			53313	2398	35580	35593	60425;60426;60427	60427					0.010491077899814627
SEEITYVKLIG	11	Unmodified	_SEEITYVKLIG_					0	0	0			REV__ENSG00000204740|ENST00000454679|MALRD1	REV__ENSG00000204740|ENST00000454679|MALRD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.37939453125	2	626.345186	1250.67582	-0.23091	-0.00014463	0.1538	9.6334E-05	-0.077102	-4.8293E-05	626.3457602386595	105.62	0.2504	105.6	105.45	105.7	-0.025146					11	5	3	0	0	0	0.17245	1	11415	11415		30.318	11.214	1	104860	+		53314	23519	35581	35594	60428	60428					0.060508023006150324
SEEITYVKLIG	11	Unmodified	_SEEITYVKLIG_					0	0	0			REV__ENSG00000204740|ENST00000454679|MALRD1	REV__ENSG00000204740|ENST00000454679|MALRD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3796997070312	2	626.345186	1250.67582	0.92608	0.00058004	-0.43398	-0.00027182	0.4921	0.00030822	626.3434660360774	105.6	0.68398	105.71	105.28	105.96	0.10766					28	17	3	0	0	0	0.17387	1	11260	11260		37.812	2.1932	1	385510	+		53315	23519	35581	35594	60429	60429					0.060508023006150324
SEELGDLVK	9	Unmodified	_SEELGDLVK_					0	0	0		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1	nc|ENSG00000141367|Q00610-2|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2580871582031	2	495.261122	988.507691	-1.7096	-0.00084669	-2.5715	-0.0012736	-4.2811	-0.0021203	495.25992726495855	40.741	2.1466	41.33	40.797	42.943	0.58915					138	58	4	0	0	0	0.77696	1	3536	3536		31.53	0	1	7011700			53316	14964;1239	35582	35595	60430	60430					0.012977401068042127
SEELLKHIFV	10	Unmodified	_SEELLKHIFV_					0	0	0		nc|ENSG00000160551|Q7L7X3-2|TAOK1;ENST00000577583.1_1_17:27807410-27838022:+|nuORF;nc|ENSG00000160551|Q7L7X3-3|TAOK1;ENSG00000160551|ENST00000261716|TAOK1	nc|ENSG00000160551|Q7L7X3-2|TAOK1	nc|ENSG00000160551|Q7L7X3-2|TAOK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5647277832031	3	405.564168	1213.67067	0.092234	3.7407E-05	1.2839	0.00052072	1.3762	0.00055812	405.5646064688323	59.947	1.8016	59.915	58.946	60.747	-0.031731					126	47	3	0	0	0	0.86452	1	5613	5613		21.686	0	1	288430			53317	5593	35583	35596	60431	60431					0.07238543228640992
SEEMIKSEL	9	Unmodified	_SEEMIKSEL_					0	0	0		nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;ENSG00000275066|ENST00000612223|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG;nc|ENSG00000275066|Q9UMZ2-6|SYNRG	nc|ENSG00000275066|Q9UMZ2-4|SYNRG	nc|ENSG00000275066|Q9UMZ2-4|SYNRG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.2598266601562	2	533.260265	1064.50598	-0.74988	-0.00039988	0.56152	0.00029943	-0.18836	-0.00010045	533.2605549153302	45.627	0.44065	46.522	46.287	46.728	0.89542					17	10	2	0	0	0	0.066118	1	4277	4277		101.25	18.948	1	684610			53318	9000	35584	35597	60432	60432					-0.02369636973435263
SEEMIKSEL	9	Unmodified	_SEEMIKSEL_					0	0	0		nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;ENSG00000275066|ENST00000612223|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG;nc|ENSG00000275066|Q9UMZ2-6|SYNRG	nc|ENSG00000275066|Q9UMZ2-4|SYNRG	nc|ENSG00000275066|Q9UMZ2-4|SYNRG	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	533.260265	1064.50598	-0.45516	-0.00024272	0.45947	0.00024502	0.0043068	2.2966E-06	533.2604263326403	45.802	0.40763	46.274	46.049	46.457	0.47139	-0.12423	-5.5266E-05	NaN	101.25	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	622110			53319	9000	35584	35597							-0.02369636973435263
SEENFAIVF	9	Unmodified	_SEENFAIVF_					0	0	0		ENSG00000147416|ENST00000276390|ATP6V1B2;ENST00000523482.5_1_8:20054917-20070443:+|nuORF	ENSG00000147416|ENST00000276390|ATP6V1B2	ENSG00000147416|ENST00000276390|ATP6V1B2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.2561645507812	2	528.25584	1054.49713	1.0239	0.00054088	-0.87836	-0.000464	0.14553	7.6878E-05	528.2552644979492	87.827	1.7191	88.276	87.685	89.405	0.44893					95	41	4	0	0	0	0.17307	3	10283	10283;10293;10304		79.451	7.5735	1	1710700			53320	4900	35585	35598	60433;60434;60435	60433					-0.027942425476112476
SEENITIKL	9	Unmodified	_SEENITIKL_					0	0	0		nc|ENSG00000095002|P43246-2|MSH2;ENSG00000095002|ENST00000233146|MSH2	nc|ENSG00000095002|P43246-2|MSH2	nc|ENSG00000095002|P43246-2|MSH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7898559570312	2	523.790047	1045.56554	0.76893	0.00040276	-0.73136	-0.00038308	0.037568	1.9678E-05	523.7895845560489	55.44	0.87277	55.841	55.446	56.319	0.40101					53	20	4	0	0	0	1.0243E-05	3	5686	5674;5686;5698		155.58	17.522	1	2415600			53321	1716	35586	35599	60436;60437;60438	60437					0.04458002032242803
SEENITIKL	9	Unmodified	_SEENITIKL_					0	0	0		nc|ENSG00000095002|P43246-2|MSH2;ENSG00000095002|ENST00000233146|MSH2	nc|ENSG00000095002|P43246-2|MSH2	nc|ENSG00000095002|P43246-2|MSH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7898559570312	2	523.790047	1045.56554	0.26308	0.0001378	-0.1325	-6.9404E-05	0.13058	6.8397E-05	523.7899097383568	55.236	0.91744	55.804	55.404	56.322	0.56836					52	21	4	0	0	0	0.0017431	4	5676	5656;5664;5676;5703		143.37	17.131	1	2443100			53322	1716	35586	35599	60439;60440;60441;60442	60441					0.04458002032242803
SEEPAGQIL	9	Unmodified	_SEEPAGQIL_					0	0	0		ENSG00000167978|ENST00000301740|SRRM2;nc|ENSG00000167978|Q9UQ35-2|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.27545166015625	2	472.24019	942.465826	-1.1311	-0.00053416	1.2558	0.00059304	0.12467	5.8873E-05	472.24071885115933	54.184	0.83603	54.769	54.333	55.169	0.58474					33	19	2	0	0	0	0.20789	1	5526	5526		39.253	0	1	748380			53323	6348	35587	35600	60443	60443					-0.007708155817113038
SEERKERIGI	10	Unmodified	_SEERKERIGI_					0	0	0			REV__ENST00000398514.7_2_5:146833397-146833517:-|nuORF	REV__ENST00000398514.7_2_5:146833397-146833517:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.8369140625	2	608.835851	1215.65715	-0.43425	-0.00026439	2.438	0.0014843	2.0037	0.0012199	608.8372155374379	110.58	1.0111	110.52	110.29	111.3	-0.055084					101	32	4	0	0	0	0.86763	1	12024	12024		26.693	2.1737	1	4475900	+		53324	26209	35588	35601	60444	60444					0.05794685449427561
SEERKERIGI	10	Unmodified	_SEERKERIGI_					0	0	0			REV__ENST00000398514.7_2_5:146833397-146833517:-|nuORF	REV__ENST00000398514.7_2_5:146833397-146833517:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.8368530273438	2	608.835851	1215.65715	3.145	0.0019148	-1.2572	-0.0007654	1.8879	0.0011494	608.8349484484327	110.59	1.437	110.57	110.28	111.71	-0.027641					106	45	4	0	0	0	0.8651	1	12250	12250		25.574	1.0549	1	3029200	+		53325	26209	35588	35601	60445	60445					0.05794685449427561
SEERKERIGI	10	Unmodified	_SEERKERIGI_					0	0	0			REV__ENST00000398514.7_2_5:146833397-146833517:-|nuORF	REV__ENST00000398514.7_2_5:146833397-146833517:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.8380737304688	2	608.835851	1215.65715	2.5696	0.0015645	0.21984	0.00013384	2.7894	0.0016983	608.8359461538699	110.06	0.58868	110.12	109.94	110.52	0.054062					49	20	3	0	0	0	0.8651	1	13322	13322		25.574	2.0514	1	4210900	+		53326	26209	35588	35601	60446	60446					0.05794685449427561
SEEVEQKI	8	Unmodified	_SEEVEQKI_					0	0	0		ENSG00000163013|ENST00000520530|FBXO41	ENSG00000163013|ENST00000520530|FBXO41	ENSG00000163013|ENST00000520530|FBXO41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.24462890625	2	481.245472	960.476391	-0.24513	-0.00011797	0.15905	7.6544E-05	-0.086073	-4.1422E-05	481.24542771564984	28.473	0.88937	28.433	27.926	28.816	-0.039907					49	21	3	0	0	0	0.90837	1	1458	1458		56.721	0	1	264800			53327	5757	35589	35602	60447	60447					-0.005428329272717747
SEEVSRSEL	9	Unmodified	_SEEVSRSEL_					0	0	0		ENST00000471383.5_1_2:202131194-202137540:+|nuORF;nc|ENSG00000064012|Q14790-6|CASP8;nc|ENSG00000064012|Q14790-5|CASP8;nc|ENSG00000064012|Q14790-8|CASP8;nc|ENSG00000064012|Q14790-7|CASP8;ENST00000339403.6_1_2:202123080-202141717:+|nuORF;nc|ENSG00000064012|Q14790-3|CASP8;nc|ENSG00000064012|Q14790-2|CASP8;ENSG00000064012|ENST00000673742|CASP8;nc|ENSG00000064012|Q14790-4|CASP8;nc|ENSG00000064012|Q14790-9|CASP8	ENST00000471383.5_1_2:202131194-202137540:+|nuORF	ENST00000471383.5_1_2:202131194-202137540:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2510375976562	2	518.251286	1034.48802	1.0455	0.00054185	-0.9365	-0.00048534	0.10903	5.6505E-05	518.2506399614301	33.7	0.45403	34.005	33.787	34.241	0.30494					26	10	3	0	0	0	0.086373	1	2459	2459		95.815	2.6197	1	523720			53328	1096	35590	35603	60448	60448					-0.027846359039358504
SEFCGCCC	8	Unmodified	_SEFCGCCC_					0	0	0			REV__nc|ENSG00000204930|A6H8Z2-2|FAM221B	REV__nc|ENSG00000204930|A6H8Z2-2|FAM221B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7746887207031	2	426.113177	850.211802	0.5744	0.00024476	-3.2226	-0.0013732	-2.6482	-0.0011284	426.1111256704824	37.55	0.19302	38.036	37.87	38.063	0.48581					5	4	2	0	0	0	0.4196	1	3031	3031		5.0869	3.8817	1	28463	+		53329	23529	35591	35604	60449	60449					-0.21929568540201672
SEFIDSQRVW	10	Unmodified	_SEFIDSQRVW_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8;ENST00000572445.1_1_17:1564459-1565038:-|nuORF	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.8092041015625	2	633.809302	1265.60405	-0.14646	-9.283E-05	-0.039189	-2.4838E-05	-0.18565	-0.00011767	633.8094646526345	64.501	0.74394	64.5	64.197	64.941	-0.00078583					47	22	3	0	0	0	0.24988	4	6023	6015;6023;6033;6041		78.264	27.071	1	461270			53330	6918	35592	35605	60450;60451;60452;60453	60451					-0.018126923332374645
SEFIDSQRVW	10	Unmodified	_SEFIDSQRVW_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8;ENST00000572445.1_1_17:1564459-1565038:-|nuORF	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.8084106445312	2	633.809302	1265.60405	-0.19859	-0.00012587	-0.03103	-1.9667E-05	-0.22962	-0.00014553	633.8095233105653	64.343	0.82397	64.309	64.026	64.85	-0.034248					44	21	3	0	0	0	0.17795	3	6128	6128;6135;6145		91.265	26.108	1	497970			53331	6918	35592	35605	60454;60455;60456	60454					-0.018126923332374645
SEFIDSQRVW	10	Unmodified	_SEFIDSQRVW_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8;ENST00000572445.1_1_17:1564459-1565038:-|nuORF	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.8097534179688	2	633.809302	1265.60405	-0.29188	-0.000185	-0.50476	-0.00031992	-0.79664	-0.00050492	633.8095625012443	64.281	0.81595	64.308	64.064	64.88	0.027138					51	21	4	0	0	0	3.526E-11	4	6058	6043;6049;6058;6067		160.82	50.702	1	507070			53332	6918	35592	35605	60457;60458;60459;60460	60459					-0.018126923332374645
SEFKGDLETL	10	Unmodified	_SEFKGDLETL_					0	0	0		nc|ENSG00000009307|O75534-2|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.7855224609375	2	569.784961	1137.55537	0.32687	0.00018624	-0.36288	-0.00020676	-0.036016	-2.0521E-05	569.784631310052	55.164	0.87743	55.565	55.196	56.074	0.40101					45	20	3	0	0	0	0.0058267	4	5650	5629;5639;5650;5663		134.77	25.287	1	2363900			53333	752	35593	35606	60461;60462;60463;60464	60463					-0.00790605692986901
SEFKGDLETL	10	Unmodified	_SEFKGDLETL_					0	0	0		nc|ENSG00000009307|O75534-2|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.7849731445312	2	569.784961	1137.55537	0.62382	0.00035545	-0.78576	-0.00044771	-0.16194	-9.2269E-05	569.7843921471242	54.967	0.79696	55.535	55.236	56.033	0.56836					41	18	3	0	0	0	0.030677	3	5634	5634;5647;5660		114.89	27.198	1	2242700			53334	752	35593	35606	60465;60466;60467	60465					-0.00790605692986901
SEFLNLIGGL	10	Unmodified	_SEFLNLIGGL_					0	0	0		ENSG00000163191|ENST00000271638|S100A11;ENST00000478109.1_1_1:152005140-152020324:-|nuORF	ENSG00000163191|ENST00000271638|S100A11	ENSG00000163191|ENST00000271638|S100A11	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7946166992188	2	531.795132	1061.57571	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.8	1	102.12	101.62	102.62	0.32511								0	0	0	0.43314	1	12392	12392		67.494	8.7117	1				53335	5774	35594	35607	60468	60468					0.047386097575099484
SEFYKHIVL	9	Unmodified	_SEFYKHIVL_					0	0	0		ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	ENSG00000138071|ENST00000260641|ACTR2	ENSG00000138071|ENST00000260641|ACTR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.3116455078125	2	568.310949	1134.60735	-0.11336	-6.4425E-05	0.76387	0.00043412	0.65051	0.00036969	568.3112184045649	52.159	0.61145	52.582	52.318	52.93	0.42348					33	14	3	0	0	0	0.14386	3	5204	5204;5214;5225		84.916	30.139	1	2390300			53336	4262	35595	35608	60469;60470;60471	60469					0.04542602511401128
SEFYKHIVL	9	Unmodified	_SEFYKHIVL_					0	0	0		ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	ENSG00000138071|ENST00000260641|ACTR2	ENSG00000138071|ENST00000260641|ACTR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.3125610351562	2	568.310949	1134.60735	1.1914	0.00067706	-0.48973	-0.00027832	0.70162	0.00039874	568.3105116567864	51.95	0.77272	52.617	52.271	53.044	0.66729					41	18	3	0	0	0	0.11055	3	5198	5187;5198;5209		90.37	33.936	1	2666700			53337	4262	35595	35608	60472;60473;60474	60473					0.04542602511401128
SEGDFCVNPC	10	Carbamidomethyl (C)	_SEGDFCVNPC(Carbamidomethyl (C))_	SEGDFCVNPC(1)		SEGDFC(-56)VNPC(56)		0	1	0		ENSG00000170385|ENST00000367001|SLC30A1	ENSG00000170385|ENST00000367001|SLC30A1	ENSG00000170385|ENST00000367001|SLC30A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.21142578125	2	564.210249	1126.40594	-0.4718	-0.00026619	3.6873	0.0020804	3.2155	0.0018142	564.212164350343	29.046	0.95419	29.017	28.65	29.604	-0.029209					45	21	4	0	0	0	0.21786	2	1807	1795;1807		82.241	29.304	2	1297900			53338	6582	35596	35609	60475;60476	60476	81				-0.15220197578901207
SEGDITQKGY	10	Unmodified	_SEGDITQKGY_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;nc|ENSG00000160305|Q14689-3|DIP2A;nc|ENSG00000160305|Q14689-2|DIP2A;nc|ENSG00000160305|Q14689-4|DIP2A;ENST00000549620.5_1_12:50898851-51072694:+|nuORF;ENSG00000066084|ENST00000301180|DIP2B;ENSG00000151240|ENST00000280886|DIP2C	nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000066084|ENST00000301180|DIP2B;ENSG00000151240|ENST00000280886|DIP2C	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.2588500976562	2	549.259111	1096.50367	-0.42447	-0.00023315	0.44854	0.00024637	0.024073	1.3222E-05	549.2592040325826	33.732	0.58543	33.735	33.509	34.095	0.0030785					28	13	3	0	0	0	0.57924	1	1977	1977		51.193	5.2407	1	72752			53339	5578;1150;5103	35597	35610	60477	60477					-0.04072349386888163
SEGDITQKGY	10	Unmodified	_SEGDITQKGY_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;nc|ENSG00000160305|Q14689-3|DIP2A;nc|ENSG00000160305|Q14689-2|DIP2A;nc|ENSG00000160305|Q14689-4|DIP2A;ENST00000549620.5_1_12:50898851-51072694:+|nuORF;ENSG00000066084|ENST00000301180|DIP2B;ENSG00000151240|ENST00000280886|DIP2C	nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000066084|ENST00000301180|DIP2B;ENSG00000151240|ENST00000280886|DIP2C	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.2565307617188	2	549.259111	1096.50367	-0.05521	-3.0325E-05	-0.14358	-7.8863E-05	-0.19879	-0.00010919	549.2587693378621	33.751	0.56338	33.754	33.494	34.057	0.0026016					20	12	2	0	0	0	0.63899	2	2001	2001;2011		47.96	10.8	1	65546			53340	5578;1150;5103	35597	35610	60478;60479	60478					-0.04072349386888163
SEGGGAGA	8	Unmodified	_SEGGGAGA_					0	0	0		chr19:47718956-47725812|24|15.38|0.0|20.55|+|0|TE_info:MSR1,MSR1_dup108,Satellite,Satellite,donor,-,47718613,47718956|None,EHD2|1;chr19:47718956-47725812|24|15.38|0.0|20.55|+|2|TE_info:MSR1,MSR1_dup108,Satellite,Satellite,donor,-,47718613,47718956|None,EHD2|3	chr19:47718956-47725812|24|15.38|0.0|20.55|+|0|TE_info:MSR1,MSR1_dup108,Satellite,Satellite,donor,-,47718613,47718956|None,EHD2|1	chr19:47718956-47725812|24|15.38|0.0|20.55|+|0|TE_info:MSR1,MSR1_dup108,Satellite,Satellite,donor,-,47718613,47718956|None,EHD2|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.85888671875	1	605.252545	604.245269	0.33964	0.00020557	3.4135	0.002066	3.7531	0.0022716	605.2544044922514	80.204	1.4227	80.621	80.082	81.505	0.41621					50	33	2	0	0	0	0.4196	1	9327	9327		1.4648	0	1	290580			53341	286	35598	35611	60480	60480					-0.07268416118472487
SEGIHEVLV	9	Unmodified	_SEGIHEVLV_					0	0	0		ENST00000470322.5_1_10:104240622-104242055:-|nuORF;ENSG00000138107|ENST00000369905|ACTR1A	ENST00000470322.5_1_10:104240622-104242055:-|nuORF	ENST00000470322.5_1_10:104240622-104242055:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7640075683594	2	491.763832	981.513111	-0.79496	-0.00039093	0.20911	0.00010283	-0.58585	-0.0002881	491.7638392443188	49.097	1.1695	49.557	48.985	50.155	0.45983					77	28	5	0	0	0	0.47272	1	4752	4752		53.351	3.3269	1	5885400			53342	4271	35599	35612	60481	60481					0.021614636892991257
SEGIHEVLV	9	Unmodified	_SEGIHEVLV_					0	0	0		ENST00000470322.5_1_10:104240622-104242055:-|nuORF;ENSG00000138107|ENST00000369905|ACTR1A	ENST00000470322.5_1_10:104240622-104242055:-|nuORF	ENST00000470322.5_1_10:104240622-104242055:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.76324462890625	2	491.763832	981.513111	0.17598	8.6541E-05	-0.77913	-0.00038315	-0.60315	-0.00029661	491.7633396187307	48.936	1.0063	49.84	49.489	50.496	0.90424					64	24	4	0	0	0	0.64922	1	4742	4742		44.117	1.6423	1	5497800			53343	4271	35599	35612	60482	60482					0.021614636892991257
SEGKKVQK	8	Unmodified	_SEGKKVQK_					0	0	0		ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.26617431640625	2	452.266542	902.51853	-0.25934	-0.00011729	-0.94974	-0.00042953	-1.2091	-0.00054683	452.2658103859262	36.504	1.3068	36.785	36.115	37.422	0.28173					85	31	5	0	0	0	0.90523	1	2870	2870		40.778	2.9666	1	1468700			53344	3811	35600	35613	60483	60483					0.06337187271753919
SEGKQKPTEPR	11	Unmodified	_SEGKQKPTEPR_					0	0	0			REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	REV__nc|ENSG00000164190|Q6KC79-2|NIPBL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.56048583984375	3	419.557964	1255.65206	2.0741	0.0008702	4.0429	0.0016962	6.117	0.0025664	419.55960083493994	32.822	0.72305	32.82	32.493	33.216	-0.0016365					45	16	4	0	0	0	0.75779	1	1907	1907		20.315	0.28454	1	143060	+		53345	21050	35601	35614	60484	60484					0.03446381586786629
SEGPWPLY	8	Unmodified	_SEGPWPLY_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.2332458496094	2	474.726718	947.438883	-2.3798	-0.0011298	-1.5713	-0.00074596	-3.9512	-0.0018757	474.7258040260887	39.788	0.76706	39.797	39.47	40.237	0.0092773					40	17	3	0	0	0	0.4196	1	2819	2819		57.453	16.674	1	286680			53346	3499	35602	35615	60485	60485					-0.036938794022489674
SEHELDVAL	9	Unmodified	_SEHELDVAL_					0	0	0		nc|ENSG00000149639|O94964-4|MTCL2;nc|ENSG00000149639|O94964-1|MTCL2;ENSG00000149639|ENST00000237536|SOGA1	nc|ENSG00000149639|O94964-4|MTCL2	nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.75311279296875	2	506.750921	1011.48729	1.4444	0.00073194	2.5202	0.0012771	3.9646	0.002009	506.75204042720367	98.5	2.1767	98.861	97.949	100.13	0.36137					121	53	5	0	0	0	0.58151	1	11879	11879		47.916	3.5384	1	5114500			53347	5042	35603	35616	60486	60486					-0.017994305530010024
SEHELDVAL	9	Unmodified	_SEHELDVAL_					0	0	0		nc|ENSG00000149639|O94964-4|MTCL2;nc|ENSG00000149639|O94964-1|MTCL2;ENSG00000149639|ENST00000237536|SOGA1	nc|ENSG00000149639|O94964-4|MTCL2	nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.753173828125	2	506.750921	1011.48729	2.3756	0.0012038	1.4162	0.00071766	3.7918	0.0019215	506.7515182161224	98.592	3.0666	98.969	97.268	100.33	0.37679					111	75	2	0	0	0	0.43338	2	11941	11941;11954		55.504	2.1528	1	6133500			53348	5042	35603	35616	60487;60488	60487					-0.017994305530010024
SEIDLLRLS	9	Unmodified	_SEIDLLRLS_					0	0	0			REV__ENST00000526909.5_1_11:710402-726978:+|nuORF	REV__ENST00000526909.5_1_11:710402-726978:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.2936401367188	2	523.298039	1044.58152	-0.042284	-2.2127E-05	-0.26782	-0.00014015	-0.3101	-0.00016227	523.2977310744875	76.225	0.45161	76.274	76.039	76.491	0.049194					24	12	2	0	0	0	0.36616	1	7359	7359		60.118	1.8883	1	200010	+		53349	22180	35604	35617	60489	60489					0.06101708269147821
SEIDLLRLS	9	Unmodified	_SEIDLLRLS_					0	0	0			REV__ENST00000526909.5_1_11:710402-726978:+|nuORF	REV__ENST00000526909.5_1_11:710402-726978:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	523.298039	1044.58152	-0.042284	-2.2127E-05	-0.26782	-0.00014015	-0.3101	-0.00016227	523.2977310744875	76.225	0.45161	76.274	76.039	76.491	0.049194	0.13067	0.00038822	NaN	60.118	24	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200010	+		53350	22180	35604	35617							0.06101708269147821
SEIDLLRLS	9	Unmodified	_SEIDLLRLS_					0	0	0			REV__ENST00000526909.5_1_11:710402-726978:+|nuORF	REV__ENST00000526909.5_1_11:710402-726978:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	523.298039	1044.58152	0.22633	0.00011844	-0.71685	-0.00037513	-0.49053	-0.00025669	523.297474482071	76.122	0.61717	76.076	75.824	76.441	-0.045975	-0.068113	-8.174E-05	NaN	60.118	29	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	148740	+		53351	22180	35604	35617							0.06101708269147821
SEIDLLRLS	9	Unmodified	_SEIDLLRLS_					0	0	0			REV__ENST00000526909.5_1_11:710402-726978:+|nuORF	REV__ENST00000526909.5_1_11:710402-726978:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	523.298039	1044.58152	0.38244	0.00020013	-0.89128	-0.0004664	-0.50884	-0.00026627	523.297435650765	76.035	0.65313	76.081	75.763	76.416	0.046448	-0.062552	-0.00026429	NaN	60.118	30	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133260	+		53352	22180	35604	35617							0.06101708269147821
SEIEAKVRY	9	Unmodified	_SEIEAKVRY_					0	0	0		nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3738403320312	2	547.795663	1093.57677	-0.43219	-0.00023675	0.38257	0.00020957	-0.049617	-2.718E-05	547.7956901076553	35.654	0.72952	35.642	35.336	36.065	-0.012199					35	15	4	0	0	0	0.20789	1	2219	2219		56.721	12.344	1	164610			53353	4170	35605	35618	60490	60490					0.03372824126381602
SEIEAKVRY	9	Unmodified	_SEIEAKVRY_					0	0	0		nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.7954711914062	2	547.795663	1093.57677	-0.011308	-6.1945E-06	-0.062685	-3.4339E-05	-0.073993	-4.0533E-05	547.7954020994724	35.671	0.58652	35.615	35.385	35.971	-0.055901					29	12	3	0	0	0	0.58668	2	2341	2328;2341		47.657	14.442	1	266700			53354	4170	35605	35618	60491;60492	60492					0.03372824126381602
SEIEAKVRY	9	Unmodified	_SEIEAKVRY_					0	0	0		nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	547.795663	1093.57677	0.26173	0.00014337	-5.5669	-0.0030495	-5.3052	-0.0029061	548.2933660635922	35.596	0.1353	35.702	35.588	35.723	0.10604	0.059157	-0.0060464	NaN	47.657	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110040			53355	4170	35605	35618							0.03372824126381602
SEIELFRVF	9	Unmodified	_SEIELFRVF_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.308837890625	2	570.308406	1138.60226	-1.1318	-0.00064545	1.8908	0.0010783	0.75903	0.00043288	570.3095321724699	85.539	0.65088	85.606	85.335	85.986	0.067268					33	14	3	0	0	0	0.12688	2	8593	8569;8593		87.696	45.3	1	338220			53356	4683	35606	35619	60493;60494	60494					0.03850298648808348
SEIELFRVF	9	Unmodified	_SEIELFRVF_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.308837890625	2	570.308406	1138.60226	0.99178	0.00056562	-0.29034	-0.00016558	0.70145	0.00040004	570.308419382443	85.646	1.1612	85.572	85.277	86.438	-0.073761					44	26	3	0	0	0	0.39367	1	8797	8797		58.23	10.314	1	409040			53357	4683	35606	35619	60495	60495					0.03850298648808348
SEIELFRVF	9	Unmodified	_SEIELFRVF_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.3081665039062	2	570.308406	1138.60226	1.258	0.00071747	-0.62593	-0.00035697	0.63212	0.0003605	570.3081140098677	85.427	0.56682	85.485	85.195	85.762	0.057899					32	12	3	0	0	0	0.24527	1	8661	8661		69.628	6.0938	1	401420			53358	4683	35606	35619	60496	60496					0.03850298648808348
SEIENVHGF	9	Unmodified	_SEIENVHGF_					0	0	0		ENST00000471733.5_1_3:196807912-197024075:-|nuORF;nc|ENSG00000075711|Q12959-3|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;ENSG00000075711|ENST00000667157|DLG1;nc|ENSG00000075711|Q12959|DLG1;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959-2|DLG1;ENST00000485409.5_1_3:196921289-197023334:-|nuORF;nc|ENSG00000075711|Q12959-5|DLG1	ENST00000471733.5_1_3:196807912-197024075:-|nuORF	ENST00000471733.5_1_3:196807912-197024075:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.2421875	2	516.243264	1030.47197	0.15241	7.8683E-05	-0.47045	-0.00024287	-0.31804	-0.00016418	516.242996114888	48.172	0.50913	48.163	48.005	48.514	-0.0093269					19	11	2	0	0	0	0.14236	1	3965	3965		85.161	8.3867	1	193030			53359	1342	35607	35620	60497	60497					-0.04204297350179331
SEIENVHGF	9	Unmodified	_SEIENVHGF_					0	0	0		ENST00000471733.5_1_3:196807912-197024075:-|nuORF;nc|ENSG00000075711|Q12959-3|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;ENSG00000075711|ENST00000667157|DLG1;nc|ENSG00000075711|Q12959|DLG1;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959-2|DLG1;ENST00000485409.5_1_3:196921289-197023334:-|nuORF;nc|ENSG00000075711|Q12959-5|DLG1	ENST00000471733.5_1_3:196807912-197024075:-|nuORF	ENST00000471733.5_1_3:196807912-197024075:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.2440795898438	2	516.243264	1030.47197	-0.43703	-0.00022561	0.24747	0.00012775	-0.18957	-9.7862E-05	516.2433413142555	48.131	0.53843	48.106	47.905	48.443	-0.025112					21	12	2	0	0	0	0.14386	1	4053	4053		84.916	13.538	1	227160			53360	1342	35607	35620	60498	60498					-0.04204297350179331
SEIENVHGF	9	Unmodified	_SEIENVHGF_					0	0	0		ENST00000471733.5_1_3:196807912-197024075:-|nuORF;nc|ENSG00000075711|Q12959-3|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;ENSG00000075711|ENST00000667157|DLG1;nc|ENSG00000075711|Q12959|DLG1;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959-2|DLG1;ENST00000485409.5_1_3:196921289-197023334:-|nuORF;nc|ENSG00000075711|Q12959-5|DLG1	ENST00000471733.5_1_3:196807912-197024075:-|nuORF	ENST00000471733.5_1_3:196807912-197024075:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.24267578125	2	516.243264	1030.47197	0.04083	2.1078E-05	0.45296	0.00023384	0.49379	0.00025492	516.2430355378463	48.22	0.57583	48.217	47.952	48.527	-0.002449					27	13	3	0	0	0	0.30689	2	4008	3997;4008		64.207	0.77727	1	246540			53361	1342	35607	35620	60499;60500	60500					-0.04204297350179331
SEIFHSQSF	9	Unmodified	_SEIFHSQSF_					0	0	0		nc|ENSG00000186522|Q9P0V9-3|SEPTIN10;ENSG00000186522|ENST00000397712|SEPTIN10;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;ENST00000517342.1_1_8:57389388-57389772:-|nuORF	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.252197265625	2	541.251089	1080.48762	-0.13901	-7.524E-05	0.018606	1.007E-05	-0.1204	-6.5169E-05	541.2509770370538	51.742	0.72044	51.74	51.395	52.115	-0.0020447					31	16	3	0	0	0	0.034797	4	4442	4424;4442;4456;4461		115.49	36.043	1	328810			53362	7802	35608	35621	60501;60502;60503;60504	60502					-0.04940010833138331
SEIFHSQSF	9	Unmodified	_SEIFHSQSF_					0	0	0		nc|ENSG00000186522|Q9P0V9-3|SEPTIN10;ENSG00000186522|ENST00000397712|SEPTIN10;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;ENST00000517342.1_1_8:57389388-57389772:-|nuORF	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.2520751953125	2	541.251089	1080.48762	0.17304	9.3659E-05	-0.24329	-0.00013168	-0.070248	-3.8022E-05	541.2508865996078	51.685	0.7382	51.662	51.369	52.107	-0.02343					29	17	2	0	0	0	0.01944	3	4545	4532;4545;4557		125.81	43.574	1	407500			53363	7802	35608	35621	60505;60506;60507	60506					-0.04940010833138331
SEIFHSQSF	9	Unmodified	_SEIFHSQSF_					0	0	0		nc|ENSG00000186522|Q9P0V9-3|SEPTIN10;ENSG00000186522|ENST00000397712|SEPTIN10;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;ENST00000517342.1_1_8:57389388-57389772:-|nuORF	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	nc|ENSG00000186522|Q9P0V9-3|SEPTIN10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.2526245117188	2	541.251089	1080.48762	0.30047	0.00016263	-0.51128	-0.00027673	-0.21082	-0.00011411	541.2507156699597	51.75	0.73589	51.762	51.482	52.218	0.012436					35	17	3	0	0	0	0.012649	3	4472	4459;4472;4483		131.03	43.277	1	378780			53364	7802	35608	35621	60508;60509;60510	60509					-0.04940010833138331
SEIHLQVKY	9	Unmodified	_SEIHLQVKY_					0	0	0		nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1;nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;ENSG00000088827|ENST00000344754|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.8059692382812	2	558.806031	1115.59751	-0.77679	-0.00043408	0.7	0.00039116	-0.076793	-4.2912E-05	558.8061416633882	46.238	0.60183	46.225	45.976	46.578	-0.013821					30	14	3	0	0	0	0.48102	3	3701	3689;3701;3722		52.937	14.131	1	191520			53365	14795	35609	35622	60511;60512;60513	60512					0.04433414506047484
SEIHLQVKY	9	Unmodified	_SEIHLQVKY_					0	0	0		nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1;nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;ENSG00000088827|ENST00000344754|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.8045654296875	2	558.806031	1115.59751	-0.45615	-0.0002549	0.23563	0.00013167	-0.22053	-0.00012323	558.8059266973603	46.218	0.66232	46.189	45.886	46.549	-0.028782					25	15	2	0	0	0	0.14236	4	3773	3773;3783;3796;3810		85.161	42.765	1	295720			53366	14795	35609	35622	60514;60515;60516;60517	60514					0.04433414506047484
SEIHLQVKY	9	Unmodified	_SEIHLQVKY_					0	0	0		nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1;nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;ENSG00000088827|ENST00000344754|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8059692382812	2	558.806031	1115.59751	0.35413	0.00019789	-0.9216	-0.00051499	-0.56747	-0.0003171	558.8054042636946	46.254	0.67376	46.249	45.92	46.593	-0.0041618					36	16	4	0	0	0	0.51592	3	3714	3714;3725;3739		51.193	16.802	1	215020			53367	14795	35609	35622	60518;60519;60520	60518					0.04433414506047484
SEIISVEVTAT	11	Unmodified	_SEIISVEVTAT_					0	0	0			REV__nc|ENSG00000166589|O75309-3|CDH16	REV__nc|ENSG00000166589|O75309-3|CDH16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.8049926757812	2	574.805894	1147.59723	0.55395	0.00031842	1.0924	0.00062793	1.6464	0.00094634	574.8062082072089	33.854	0.41144	33.808	33.614	34.026	-0.045815					32	17	2	0	0	0	0.5603	1	1672	1672		47.657	3.5405	1	170110	+		53368	21306	35610	35623	60521	60521					0.02933949995531293
SEIKSFFLFV	10	Unmodified	_SEIKSFFLFV_					0	0	0			REV__ENSG00000153292|ENST00000371253|ADGRF1	REV__ENSG00000153292|ENST00000371253|ADGRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.8370361328125	2	608.834257	1215.65396	0.093851	5.714E-05	4.4128	0.0026867	4.5067	0.0027438	608.836828431824	110.46	1.0631	110.5	110.23	111.29	0.031738					103	33	4	0	0	0	0.86305	1	12128	12128		31.955	1.6371	1	3714300	+		53369	20344	35611	35624	60522	60522					0.05476042342706933
SEIKVPDVEL	10	Unmodified	_SEIKVPDVEL_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.8104858398438	2	564.810979	1127.6074	0.42837	0.00024195	-0.39879	-0.00022524	0.029582	1.6709E-05	564.8106270051878	67.556	0.80498	68.105	67.729	68.534	0.54819					41	18	3	0	0	0	0.34329	1	7428	7428		68.846	14.07	1	529150			53370	3371	35612	35625	60523	60523					0.048705577207556416
SEIKVPDVEL	10	Unmodified	_SEIKVPDVEL_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	564.810979	1127.6074	1.0098	0.00057037	-1.2516	-0.0007069	-0.24173	-0.00013653	564.8101418732522	67.648	0.73819	68.034	67.707	68.445	0.38515	-0.03552	-0.00051656	NaN	68.846	39	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	490060			53371	3371	35612	35625							0.048705577207556416
SEILDGNQL	9	Unmodified	_SEILDGNQL_					0	0	0		nc|ENSG00000009307|O75534-2|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7497863769531	2	494.750921	987.48729	-1.2941	-0.00064027	0.45962	0.0002274	-0.83451	-0.00041288	494.7509960382149	60.793	0.42222	61.182	60.9	61.322	0.38945					19	11	2	0	0	0	0.36616	1	6465	6465		60.118	1.8883	1	633510			53372	752	35613	35626	60524	60524					-0.006954305530030069
SEILDGNQL	9	Unmodified	_SEILDGNQL_					0	0	0		nc|ENSG00000009307|O75534-2|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	nc|ENSG00000009307|O75534-2|CSDE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.75030517578125	2	494.750921	987.48729	-0.64591	-0.00031957	-0.44471	-0.00022002	-1.0906	-0.00053959	494.7506117687338	60.637	0.47012	61.19	60.855	61.325	0.55323					21	12	2	0	0	0	0.18338	1	6460	6460		77.318	15.21	1	739670			53373	752	35613	35626	60525	60525					-0.006954305530030069
SEINKPNFY	9	Unmodified	_SEINKPNFY_					0	0	0		ENSG00000067334|ENST00000436063|DNTTIP2	ENSG00000067334|ENST00000436063|DNTTIP2	ENSG00000067334|ENST00000436063|DNTTIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.2730712890625	2	556.274564	1110.53457	-0.6986	-0.00038862	0.85003	0.00047285	0.15143	8.4236E-05	556.2747986140876	47.983	0.53423	47.974	47.762	48.297	-0.0093269					25	15	3	0	0	0	0.30689	1	3935	3935		64.207	0	1	259540			53374	1182	35614	35627	60526	60526					-0.016271512820139833
SEINKPNFY	9	Unmodified	_SEINKPNFY_					0	0	0		ENSG00000067334|ENST00000436063|DNTTIP2	ENSG00000067334|ENST00000436063|DNTTIP2	ENSG00000067334|ENST00000436063|DNTTIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	556.2740478515625	2	556.274564	1110.53457	-0.28	-0.00015576	0.63203	0.00035158	0.35204	0.00019583	556.2745083738072	47.867	0.66684	47.841	47.644	48.311	-0.026737					35	18	3	0	0	0	0.44421	1	4019	4019		54.776	8.8041	1	346340			53375	1182	35614	35627	60527	60527					-0.016271512820139833
SEINKPNFY	9	Unmodified	_SEINKPNFY_					0	0	0		ENSG00000067334|ENST00000436063|DNTTIP2	ENSG00000067334|ENST00000436063|DNTTIP2	ENSG00000067334|ENST00000436063|DNTTIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	556.2742919921875	2	556.274564	1110.53457	0.50565	0.00028128	-0.54619	-0.00030383	-0.040549	-2.2557E-05	556.2740078670425	47.867	0.60693	47.865	47.709	48.316	-0.0024452					30	19	2	0	0	0	0.10807	2	3955	3955;3964		90.777	27.47	1	225800			53376	1182	35614	35627	60528;60529	60528					-0.016271512820139833
SEKAGIIQDTW	11	Unmodified	_SEKAGIIQDTW_					0	0	0		nc|ENSG00000125844|Q9P2E9-3|RRBP1;ENSG00000125844|ENST00000377813|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	624.816650390625	2	624.31696	1246.61937	-0.23509	-0.00014677	0.52953	0.0003306	0.29444	0.00018383	624.3171538500372	57.142	0.5226	57.13	56.912	57.435	-0.012203					45	17	3	0	0	0	0.31611	3	5142	5142;5150;5158		72.096	20.568	1	248330			53377	3420	35615	35628	60530;60531;60532	60530					0.005921744639408644
SEKAGIIQDTW	11	Unmodified	_SEKAGIIQDTW_					0	0	0		nc|ENSG00000125844|Q9P2E9-3|RRBP1;ENSG00000125844|ENST00000377813|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	624.3157348632812	2	624.31696	1246.61937	-0.048838	-3.0491E-05	0.50924	0.00031793	0.4604	0.00028743	624.3169334358831	57.123	0.63839	57.094	56.83	57.469	-0.02866					41	19	3	0	0	0	0.11377	3	5253	5243;5253;5264		90.149	40.115	1	266390			53378	3420	35615	35628	60533;60534;60535	60534					0.005921744639408644
SEKAGIIQDTW	11	Unmodified	_SEKAGIIQDTW_					0	0	0		nc|ENSG00000125844|Q9P2E9-3|RRBP1;ENSG00000125844|ENST00000377813|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	nc|ENSG00000125844|Q9P2E9-3|RRBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	624.3171997070312	2	624.31696	1246.61937	-0.62303	-0.00038897	0.77079	0.00048122	0.14776	9.2249E-05	624.3173033085636	57.102	0.56545	57.135	56.89	57.455	0.033184					35	19	2	0	0	0	0.018431	3	5181	5172;5181;5192		108.31	43.155	1	355120			53379	3420	35615	35628	60536;60537;60538	60537					0.005921744639408644
SEKDIAPPP	9	Unmodified	_SEKDIAPPP_					0	0	0		ENSG00000108559|ENST00000573584|NUP88;ENST00000575976.1_1_17:5290923-5291292:-|nuORF;ENST00000576862.5_1_17:5290923-5298221:-|nuORF	ENSG00000108559|ENST00000573584|NUP88	ENSG00000108559|ENST00000573584|NUP88	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.250732421875	2	477.250557	952.486562	-0.48393	-0.00023096	0.20142	9.6128E-05	-0.28251	-0.00013483	477.2505637643697	22.757	0.62847	22.146	21.91	22.539	-0.6107					32	15	3	0	0	0	0.76764	1	983	983		34.173	2.6427	1	259200			53380	2418	35616	35629	60539	60539					0.008417747979365231
SEKFVKYLRN	10	Unmodified	_SEKFVKYLRN_					0	0	0		ENST00000481328.7_1_11:76890894-76905079:+|nuORF;nc|ENSG00000137474|Q13402-5|MYO7A;nc|ENSG00000137474|Q13402-8|MYO7A;nc|ENSG00000137474|Q13402-2|MYO7A;nc|ENSG00000137474|Q13402-7|MYO7A;ENSG00000137474|ENST00000409709|MYO7A;nc|ENSG00000137474|Q13402-6|MYO7A	ENST00000481328.7_1_11:76890894-76905079:+|nuORF	ENST00000481328.7_1_11:76890894-76905079:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8821411132812	2	642.358962	1282.70337	2.1883	0.0014057	-1.7725	-0.0011386	0.41585	0.00026712	642.8613373781727	97.866	0.17288	97.811	97.729	97.902	-0.055542					5	3	2	0	0	0	0.37624	1	10537	10537		24.519	3.682	1	23352			53381	4202	35617	35630	60540	60540					0.0733275035152019
SEKGAVRPTA	10	Unmodified	_SEKGAVRPTA_					0	0	0		nc|ENSG00000061337|Q9Y250-5|LZTS1;nc|ENSG00000061337|Q9Y250-4|LZTS1;nc|ENSG00000061337|Q9Y250-3|LZTS1;nc|ENSG00000061337|Q9Y250-2|LZTS1;ENSG00000061337|ENST00000381569|LZTS1;nc|ENSG00000061337|Q9Y250-6|LZTS1	nc|ENSG00000061337|Q9Y250-5|LZTS1	nc|ENSG00000061337|Q9Y250-5|LZTS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.280029296875	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.66675	1	8627	8627		46.457	9.2977	1	1814000			53382	1073	35618	35631	60541	60541					0.039116708121468946
SEKGLLTK	8	Unmodified	_SEKGLLTK_					0	0	0			REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28	REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2622375488281	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.80117	1	2999	2999		16.717	1.0756	1	22924000	+		53383	23670	35619	35632	60542	60542					0.07010669040221273
SEKGLLTK	8	Unmodified	_SEKGLLTK_					0	0	0			REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28	REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7710876464844	2	438.263468	874.512382	-0.24105	-0.00010564	-0.23201	-0.00010168	-0.47307	-0.00020733	438.2631604114404	37.879	1.1247	38.193	37.663	38.788	0.31312					50	28	2	0	0	0	0.4196	1	3065	3065		0.90815	0.080064	1	1042800	+		53384	23670	35619	35632	60543	60543					0.07010669040221273
SEKITAVK	8	Unmodified	_SEKITAVK_					0	0	0		LTR8_dup2971|chr17:8380695-8381392:+|6.055160977625477|0.2447948664736123|4.63|63.0|9|2|sense	LTR8_dup2971|chr17:8380695-8381392:+|6.055160977625477|0.2447948664736123|4.63|63.0|9|2|sense	LTR8_dup2971|chr17:8380695-8381392:+|6.055160977625477|0.2447948664736123|4.63|63.0|9|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2633972167969	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.8537	1	2126	2126		25.574	0.12388	1	3507500			53385	14705	35620	35633	60544	60544					0.07010669040232642
SEKITAVK	8	Unmodified	_SEKITAVK_					0	0	0		LTR8_dup2971|chr17:8380695-8381392:+|6.055160977625477|0.2447948664736123|4.63|63.0|9|2|sense	LTR8_dup2971|chr17:8380695-8381392:+|6.055160977625477|0.2447948664736123|4.63|63.0|9|2|sense	LTR8_dup2971|chr17:8380695-8381392:+|6.055160977625477|0.2447948664736123|4.63|63.0|9|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2633972167969	2	438.263468	874.512382	0.15263	6.689E-05	-0.38156	-0.00016722	-0.22893	-0.00010033	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.8537	1	1935	1935		25.574	0.12388	1	11370000			53386	14705	35620	35633	60545	60545					0.07010669040232642
SEKKGKTHT	9	Unmodified	_SEKKGKTHT_					0	0	0			REV__ENSG00000284465|ENST00000640846|TAF11L7	REV__ENSG00000284465|ENST00000640846|TAF11L7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2799377441406	2	508.28018	1014.54581	0.22565	0.0001147	-0.11322	-5.7546E-05	0.11244	5.715E-05	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.6204	1	9103	9103		45.972	1.8554	1	1820400	+		53387	24056	35621	35634	60546	60546					0.03911670812135526
SEKKGKTHT	9	Unmodified	_SEKKGKTHT_					0	0	0			REV__ENSG00000284465|ENST00000640846|TAF11L7	REV__ENSG00000284465|ENST00000640846|TAF11L7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.27996826171875	2	508.28018	1014.54581	-0.39653	-0.00020155	0.29161	0.00014822	-0.10492	-5.3328E-05	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.67345	2	8736	8700;8736		42.396	9.5837	1	2080300	+		53388	24056	35621	35634	60547;60548	60548					0.03911670812135526
SEKKGKTHT	9	Unmodified	_SEKKGKTHT_					0	0	0			REV__ENSG00000284465|ENST00000640846|TAF11L7	REV__ENSG00000284465|ENST00000640846|TAF11L7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.2796325683594	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.73802	1	8900	8900		37.812	2.1932	1	1954800	+		53389	24056	35621	35634	60549	60549					0.03911670812135526
SEKKGKTHT	9	Unmodified	_SEKKGKTHT_					0	0	0			REV__ENSG00000284465|ENST00000640846|TAF11L7	REV__ENSG00000284465|ENST00000640846|TAF11L7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2798767089844	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.69624	1	8800	8800		40.778	3.7497	1	1814000	+		53390	24056	35621	35634	60550	60550					0.03911670812135526
SEKKKNLW	8	Unmodified	_SEKKKNLW_					0	0	0		ENST00000518836.5_1_5:158526443-158526685:-|nuORF	ENST00000518836.5_1_5:158526443-158526685:-|nuORF	ENST00000518836.5_1_5:158526443-158526685:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.79296875	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.89962	1	8660	8660		38.806	1.647	1	817800			53391	13123	35622	35635	60551	60551					0.06185449197187154
SEKKLETT	8	Unmodified	_SEKKLETT_					0	0	0		ENSG00000165392|ENST00000298139|WRN	ENSG00000165392|ENST00000298139|WRN	ENSG00000165392|ENST00000298139|WRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.2566223144531	2	468.25584	934.497126	-1.5153	-0.00070955	-0.74007	-0.00034654	-2.2554	-0.0010561	468.2553507419965	82.534	3.6867	82.66	80.393	84.08	0.12601					150	88	2	0	0	0	0.89494	1	7863	7863		37.159	5.2042	1	169950			53392	6079	35623	35636	60552	60552					0.027257574523900985
SEKKQTKPN	9	Unmodified	_SEKKQTKPN_					0	0	0		nc|ENSG00000091656|Q86UP3|ZFHX4;nc|ENSG00000091656|Q86UP3-4|ZFHX4;nc|ENSG00000091656|Q86UP3-2|ZFHX4;ENSG00000091656|ENST00000651372|ZFHX4	nc|ENSG00000091656|Q86UP3|ZFHX4	nc|ENSG00000091656|Q86UP3|ZFHX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2935791015625	2	530.293288	1058.57202	2.0317	0.0010774	-1.9029	-0.0010091	0.12876	6.828E-05	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.64555	1	9650	9650		44.377	2.9506	1	1811300			53393	1681	35624	35637	60553	60553					0.04507939983614051
SEKKQTKPN	9	Unmodified	_SEKKQTKPN_					0	0	0		nc|ENSG00000091656|Q86UP3|ZFHX4;nc|ENSG00000091656|Q86UP3-4|ZFHX4;nc|ENSG00000091656|Q86UP3-2|ZFHX4;ENSG00000091656|ENST00000651372|ZFHX4	nc|ENSG00000091656|Q86UP3|ZFHX4	nc|ENSG00000091656|Q86UP3|ZFHX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2933349609375	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.6204	2	9463	9415;9463		45.972	3.108	1	1864800			53394	1681	35624	35637	60554;60555	60555					0.04507939983614051
SEKKQTKPN	9	Unmodified	_SEKKQTKPN_					0	0	0		nc|ENSG00000091656|Q86UP3|ZFHX4;nc|ENSG00000091656|Q86UP3-4|ZFHX4;nc|ENSG00000091656|Q86UP3-2|ZFHX4;ENSG00000091656|ENST00000651372|ZFHX4	nc|ENSG00000091656|Q86UP3|ZFHX4	nc|ENSG00000091656|Q86UP3|ZFHX4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2933349609375	2	530.293288	1058.57202	1.6334	0.0008662	-1.7145	-0.0009092	-0.081076	-4.2994E-05	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.76853	1	10782	10782		33.922	0	1	1816400			53395	1681	35624	35637	60556	60556					0.04507939983614051
SEKQLAEYL	9	Unmodified	_SEKQLAEYL_					0	0	0			REV__ENSG00000164080|ENST00000684192|RAD54L2	REV__ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.2821655273438	2	540.782222	1079.54989	-0.2214	-0.00011973	-0.37981	-0.00020539	-0.60121	-0.00032512	540.7819318864873	60.029	0.56477	60.015	59.789	60.354	-0.013729					37	14	3	0	0	0	0.69624	1	5566	5566		40.778	0.20554	1	212540	+		53396	21027	35625	35638	60557	60557					0.013297155151803963
SEKQLAEYL	9	Unmodified	_SEKQLAEYL_					0	0	0			REV__ENSG00000164080|ENST00000684192|RAD54L2	REV__ENSG00000164080|ENST00000684192|RAD54L2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.7802734375	2	540.782222	1079.54989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.771	1	59.804	59.304	60.304	0.032822								0	0	0	0.30613	1	5535	5535		42.396	0.96952	1		+		53397	21027	35625	35638	60558	60558					0.013297155151803963
SEKRIGSW	8	Unmodified	_SEKRIGSW_					0	0	0		ENST00000488338.2_1_7:99751579-99751678:+|nuORF	ENST00000488338.2_1_7:99751579-99751678:+|nuORF	ENST00000488338.2_1_7:99751579-99751678:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.7567443847656	2	481.756341	961.498129	-1.4795	-0.00071278	1.9304	0.00093	0.4509	0.00021722	481.7570239648171	57.421	0.72549	57.421	57.132	57.857	0					69	29	3	0	0	0	0.84341	1	4936	4936		24.203	0	1	340950			53398	12624	35626	35639	60559	60559					0.01584016611957395
SEKRKGGGG	9	Unmodified	_SEKRKGGGG_					0	0	0			REV__ENST00000515742.1_3_6:18258274-18264279:-|nuORF	REV__ENST00000515742.1_3_6:18258274-18264279:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26220703125	2	438.238316	874.462078	-2.6015	-0.0011401	-2.0577	-0.00090178	-4.6592	-0.0020419	438.23808951414463	41.074	0.67608	41.466	41.202	41.878	0.39209					29	18	2	0	0	0	0.20789	1	3553	3553		42.396	0	1	1282600	+		53399	26162	35627	35640	60560	60560					0.019825594351118525
SEKSALTSL	9	Unmodified	_SEKSALTSL_					0	0	0			REV__ENSG00000163507|ENST00000295746|CIP2A	REV__ENSG00000163507|ENST00000295746|CIP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2550964355469	2	468.25584	934.497126	0.51599	0.00024162	-2.6642	-0.0012475	-2.1482	-0.0010059	468.25439307684206	81.814	3.5851	81.751	80.618	84.204	-0.062943					157	83	2	0	0	0	0.64555	1	8459	8459		44.377	5.571	1	180670	+		53400	20925	35628	35641	60561	60561					0.027257574523900985
SEKSALTSL	9	Unmodified	_SEKSALTSL_					0	0	0			REV__ENSG00000163507|ENST00000295746|CIP2A	REV__ENSG00000163507|ENST00000295746|CIP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2556457519531	2	468.25584	934.497126	-0.24701	-0.00011566	-1.9017	-0.0008905	-2.1488	-0.0010062	468.25479155810393	81.956	2.8945	82.014	80.909	83.803	0.057808					126	66	2	0	0	0	0.71772	1	8163	8163		39.253	0.44669	1	193290	+		53401	20925	35628	35641	60562	60562					0.027257574523900985
SEKSPLFLLN	10	Unmodified	_SEKSPLFLLN_					0	0	0			REV__nc|ENSG00000160191|O76083-5|PDE9A	REV__nc|ENSG00000160191|O76083-5|PDE9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.319091796875	2	574.321514	1146.62847	0.81881	0.00047026	-4.3328	-0.0024884	-3.514	-0.0020181	574.318899421049	94.256	4.622	94.418	92.922	97.544	0.16252					274	110	4	0	0	0	0.86471	1	9603	9603		30.318	1.1477	1	1866200	+		53402	29964	35629	35642	60563	60563					0.061025678202895506
SEKVKTLA	8	Unmodified	_SEKVKTLA_					0	0	0			REV__ENSG00000178996|ENST00000381410|SNX18	REV__ENSG00000178996|ENST00000381410|SNX18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633972167969	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.85277	1	2614	2614		25.45	0	1	2862500	+		53403	22306	35630	35643	60564	60564					0.07010669040244011
SELDDRADAL	10	Unmodified	_SELDDRADAL_					0	0	0		ENST00000544432.5_1_12:6572000-6579752:-|nuORF;ENST00000535927.5_1_12:6574044-6579752:-|nuORF;ENSG00000049245|ENST00000054666|VAMP3;nc|ENSG00000139190|P23763-2|VAMP1;ENSG00000220205|ENST00000316509|VAMP2;nc|ENSG00000139190|P23763-3|VAMP1;ENSG00000139190|ENST00000396308|VAMP1;ENST00000539047.1_1_12:6574469-6579793:-|nuORF	ENST00000544432.5_1_12:6572000-6579752:-|nuORF	ENST00000544432.5_1_12:6572000-6579752:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.7626342773438	2	552.762017	1103.50948	-1.0971	-0.00060644	0.64078	0.0003542	-0.45632	-0.00025224	552.7623131123095	45.849	0.44581	46.32	46.09	46.536	0.47139					26	10	3	0	0	0	0.40664	2	4301	4283;4301		63.534	4.7519	1	869000			53404	983	35631	35644	60565;60566	60566					-0.038132508752369176
SELDDRADAL	10	Unmodified	_SELDDRADAL_					0	0	0		ENST00000544432.5_1_12:6572000-6579752:-|nuORF;ENST00000535927.5_1_12:6574044-6579752:-|nuORF;ENSG00000049245|ENST00000054666|VAMP3;nc|ENSG00000139190|P23763-2|VAMP1;ENSG00000220205|ENST00000316509|VAMP2;nc|ENSG00000139190|P23763-3|VAMP1;ENSG00000139190|ENST00000396308|VAMP1;ENST00000539047.1_1_12:6574469-6579793:-|nuORF	ENST00000544432.5_1_12:6572000-6579752:-|nuORF	ENST00000544432.5_1_12:6572000-6579752:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.762451171875	2	552.762017	1103.50948	-0.71158	-0.00039334	0.19611	0.0001084	-0.51548	-0.00028494	552.7620663628303	45.606	0.47791	46.501	46.327	46.805	0.89542					27	11	3	0	0	0	0.12134	1	4271	4271		98.582	34.375	1	996940			53405	983	35631	35644	60567	60567					-0.038132508752369176
SELEKTFNL	9	Unmodified	_SELEKTFNL_					0	0	0		nc|ENSG00000185404|Q9H930-1|SP140L;nc|ENSG00000185404|Q9H930-2|SP140L;ENSG00000185404|ENST00000415673|SP140L;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497|SP100;ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000185404|Q9H930-3|SP140L	nc|ENSG00000185404|Q9H930-1|SP140L	nc|ENSG00000185404|Q9H930-1|SP140L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	540.7822265625	2	540.782222	1079.54989	-0.2214	-0.00011973	-0.37981	-0.00020539	-0.60121	-0.00032512	540.7819318864873	60.029	0.56477	60.015	59.789	60.354	-0.013729					37	14	3	0	0	0	0.44529	3	5537	5519;5529;5537		54.722	8.7579	1	212540			53406	7710	35632	35645	60568;60569;60570	60570					0.013297155152031337
SELESVRLQR	10	Unmodified	_SELESVRLQR_					0	0	0			REV__ENSG00000233436|ENST00000422652|BTBD18	REV__ENSG00000233436|ENST00000422652|BTBD18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.8367309570312	2	608.835851	1215.65715	-0.43425	-0.00026439	2.438	0.0014843	2.0037	0.0012199	608.8372155374379	110.58	1.0111	110.52	110.29	111.3	-0.055084					101	32	4	0	0	0	0.8608	1	12070	12070		34.173	5.023	1	4475900	+		53407	23774	35633	35646	60571	60571					0.05794685449427561
SELESVRLQR	10	Unmodified	_SELESVRLQR_					0	0	0			REV__ENSG00000233436|ENST00000422652|BTBD18	REV__ENSG00000233436|ENST00000422652|BTBD18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.8366088867188	2	608.835851	1215.65715	3.145	0.0019148	-1.2572	-0.0007654	1.8879	0.0011494	608.8349484484327	110.59	1.437	110.57	110.28	111.71	-0.027641					106	45	4	0	0	0	0.80179	1	12262	12262		39.253	7.723	1	3029200	+		53408	23774	35633	35646	60572	60572					0.05794685449427561
SELGWKFYDA	10	Unmodified	_SELGWKFYDA_					0	0	0		ENSG00000148057|ENST00000376419|IDNK;nc|ENSG00000148057|Q5T6J7-2|IDNK	ENSG00000148057|ENST00000376419|IDNK	ENSG00000148057|ENST00000376419|IDNK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.2843627929688	2	608.287671	1214.56079	-1.1122	-0.00067655	1.3403	0.00081531	0.22812	0.00013876	608.2883606901746	70.838	0.67776	70.876	70.635	71.313	0.038055					94	36	4	0	0	0	0.38353	1	6786	6786		65.465	0	1	732520			53409	4932	35634	35647	60573	60573					-0.03790882110502025
SELHKLYDEE	10	Unmodified	_SELHKLYDEE_					0	0	0		ENSG00000173064|ENST00000682272|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	ENSG00000173064|ENST00000682272|HECTD4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	631.8483276367188	2	631.7986	1261.58265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.392	1	44.333	43.833	44.833	-0.058262								0	0	0	0.45132	1	3124	3124		36.447	1.2947	1				53410	6820	35635	35648	60574	60574					-0.03768122152609976
SELKFNEYW	9	Unmodified	_SELKFNEYW_					0	0	0		ENSG00000189171|ENST00000476133|S100A13	ENSG00000189171|ENST00000476133|S100A13	ENSG00000189171|ENST00000476133|S100A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.2827758789062	2	608.287671	1214.56079	-0.42542	-0.00025878	0.52233	0.00031773	0.096913	5.8951E-05	608.287892447858	70.979	0.61301	70.939	70.686	71.299	-0.039001					84	29	4	0	0	0	0.17181	3	6891	6885;6891;6900		79.713	19.088	1	685590			53411	7995	35636	35649	60575;60576;60577	60576					-0.037908821105247625
SELKFNEYW	9	Unmodified	_SELKFNEYW_					0	0	0		ENSG00000189171|ENST00000476133|S100A13	ENSG00000189171|ENST00000476133|S100A13	ENSG00000189171|ENST00000476133|S100A13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.2821655273438	2	608.287671	1214.56079	-1.1122	-0.00067655	1.3403	0.00081531	0.22812	0.00013876	608.2883606901746	70.838	0.67776	70.876	70.635	71.313	0.038055					94	36	4	0	0	0	0.24527	1	6796	6796		69.628	20.092	1	732520			53412	7995	35636	35649	60578	60578					-0.037908821105247625
SELKFNEYW	9	Unmodified	_SELKFNEYW_					0	0	0		ENSG00000189171|ENST00000476133|S100A13	ENSG00000189171|ENST00000476133|S100A13	ENSG00000189171|ENST00000476133|S100A13	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	608.287671	1214.56079	-0.44305	-0.0002695	0.84711	0.00051529	0.40407	0.00024579	608.2880723500915	71.058	0.86656	71.092	70.831	71.697	0.034004	0.12277	-7.1502E-05	NaN	79.713	91	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	623810			53413	7995	35636	35649							-0.037908821105247625
SELMGRKLR	9	Unmodified	_SELMGRKLR_					0	0	0		ENSG00000188739|ENST00000408888|RBM34;ENST00000495224.1_1_1:235295030-235299397:-|nuORF	ENSG00000188739|ENST00000408888|RBM34	ENSG00000188739|ENST00000408888|RBM34	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.25390625	2	545.3135	1088.61245	0.076835	4.1899E-05	3.8933	0.002123	3.9701	0.0021649	545.3157848760909	68.957	0.17077	68.92	68.822	68.993	-0.036957					7	5	2	0	0	0	0.20789	1	6665	6665		24.203	0	1	62884			53414	7955	35637	35650	60579	60579					0.07168583102384218
SELNSPAPH	9	Unmodified	_SELNSPAPH_					0	0	0		ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.2314147949219	2	476.230156	950.445759	-1.0974	-0.00052259	-2.0645	-0.00098319	-3.1619	-0.0015058	476.22891459110883	79.428	0.85272	79.978	79.403	80.256	0.54945					31	19	2	0	0	0	0.20789	1	9086	9086		30.504	3.8107	1	159870			53415	9022	35638	35651	60580	60580					-0.03144566521677916
SELREYTEGL	10	Unmodified	_SELREYTEGL_					0	0	0		nc|ENSG00000172349|Q14005-2|IL16;ENSG00000172349|ENST00000683961|IL16;nc|ENSG00000172349|Q14005-4|IL16;nc|ENSG00000172349|Q14005-3|IL16	nc|ENSG00000172349|Q14005-2|IL16	nc|ENSG00000172349|Q14005-2|IL16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.7929077148438	2	598.793318	1195.57208	0.65429	0.00039178	-0.29939	-0.00017927	0.3549	0.00021251	598.7928946630699	53.558	0.62235	53.972	53.704	54.326	0.4139					30	14	3	0	0	0	0.26675	1	5414	5414		76.17	10.704	1	625650			53416	6765	35639	35652	60581	60581					-0.01788104807064883
SELREYTEGL	10	Unmodified	_SELREYTEGL_					0	0	0		nc|ENSG00000172349|Q14005-2|IL16;ENSG00000172349|ENST00000683961|IL16;nc|ENSG00000172349|Q14005-4|IL16;nc|ENSG00000172349|Q14005-3|IL16	nc|ENSG00000172349|Q14005-2|IL16	nc|ENSG00000172349|Q14005-2|IL16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.7931518554688	2	598.793318	1195.57208	-0.43186	-0.00025859	0.41976	0.00025135	-0.012104	-7.2481E-06	598.7933732465302	53.315	0.70664	53.929	53.614	54.321	0.61436					35	16	3	0	0	0	0.57305	1	5404	5404		51.528	2.0862	1	608030			53417	6765	35639	35652	60582	60582					-0.01788104807064883
SELRVQFGVN	10	Unmodified	_SELRVQFGVN_					0	0	0			REV__ENSG00000132153|ENST00000445061|DHX30	REV__ENSG00000132153|ENST00000445061|DHX30	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.810546875	2	574.806562	1147.59857	0.27125	0.00015592	0.24802	0.00014257	0.51928	0.00029848	574.8063559117861	33.69	0.47034	33.798	33.59	34.06	0.10828					35	20	2	0	0	0	0.85981	1	1683	1683		35.152	3.6222	1	152360	+		53418	18984	35640	35653	60583	60583					0.03067628874964612
SEMDTSVKF	9	Oxidation (M)	_SEM(Oxidation (M))DTSVKF_		SEM(1)DTSVKF		SEM(60)DTSVKF	0	0	1		ENST00000460641.1_1_2:187529903-187532515:+|nuORF;nc|ENSG00000138448|P06756-3|ITGAV;nc|ENSG00000138448|P06756-2|ITGAV;ENSG00000138448|ENST00000261023|ITGAV	ENST00000460641.1_1_2:187529903-187532515:+|nuORF	ENST00000460641.1_1_2:187529903-187532515:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2361450195312	2	530.23679	1058.45903	0.27172	0.00014408	-1.7163	-0.00091007	-1.4446	-0.00076599	530.235694602922	40.103	0.67463	40.072	39.764	40.439	-0.030987					31	16	3	0	0	0	0.36616	1	2836	2836		60.118	6.7668	1	310870			53419	4297	35641	35654	60584	60584		74			-0.06786496524591712
SEMDTSVKF	9	Oxidation (M)	_SEM(Oxidation (M))DTSVKF_		SEM(1)DTSVKF		SEM(85)DTSVKF	0	0	1		ENST00000460641.1_1_2:187529903-187532515:+|nuORF;nc|ENSG00000138448|P06756-3|ITGAV;nc|ENSG00000138448|P06756-2|ITGAV;ENSG00000138448|ENST00000261023|ITGAV	ENST00000460641.1_1_2:187529903-187532515:+|nuORF	ENST00000460641.1_1_2:187529903-187532515:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2362670898438	2	530.23679	1058.45903	-0.92784	-0.00049197	0.1977	0.00010483	-0.73014	-0.00038714	530.2366917240743	40.029	0.76088	40.038	39.687	40.448	0.0092773					36	17	3	0	0	0	0.14236	1	2844	2844		85.161	11.186	1	322680			53420	4297	35641	35654	60585	60585		74			-0.06786496524591712
SEMDTSVKF	9	Unmodified	_SEMDTSVKF_					0	0	0		ENST00000460641.1_1_2:187529903-187532515:+|nuORF;nc|ENSG00000138448|P06756-3|ITGAV;nc|ENSG00000138448|P06756-2|ITGAV;ENSG00000138448|ENST00000261023|ITGAV	ENST00000460641.1_1_2:187529903-187532515:+|nuORF	ENST00000460641.1_1_2:187529903-187532515:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	522.2388305664062	2	522.239332	1042.46411	0.092336	4.8221E-05	-0.17453	-9.1149E-05	-0.082199	-4.2928E-05	522.239038988769	50.055	0.85317	50.052	49.756	50.609	-0.0030327					47	20	3	0	0	0	0.045756	2	4226	4214;4226		109.48	34.843	1	644230			53421	4297	35641	35655	60586;60587	60587					-0.055421926619601436
SEMDTSVKF	9	Unmodified	_SEMDTSVKF_					0	0	0		ENST00000460641.1_1_2:187529903-187532515:+|nuORF;nc|ENSG00000138448|P06756-3|ITGAV;nc|ENSG00000138448|P06756-2|ITGAV;ENSG00000138448|ENST00000261023|ITGAV	ENST00000460641.1_1_2:187529903-187532515:+|nuORF	ENST00000460641.1_1_2:187529903-187532515:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	522.2391357421875	2	522.239332	1042.46411	-0.30358	-0.00015854	0.18785	9.8104E-05	-0.11573	-6.0439E-05	522.2391793428664	50.077	0.75053	50.054	49.677	50.427	-0.02343					41	16	3	0	0	0	0.026116	2	4304	4304;4329		120.87	38.563	1	694930			53422	4297	35641	35655	60588;60589	60588					-0.055421926619601436
SEMDTSVKF	9	Unmodified	_SEMDTSVKF_					0	0	0		ENST00000460641.1_1_2:187529903-187532515:+|nuORF;nc|ENSG00000138448|P06756-3|ITGAV;nc|ENSG00000138448|P06756-2|ITGAV;ENSG00000138448|ENST00000261023|ITGAV	ENST00000460641.1_1_2:187529903-187532515:+|nuORF	ENST00000460641.1_1_2:187529903-187532515:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	522.2386474609375	2	522.239332	1042.46411	0.35031	0.00018294	-0.4563	-0.0002383	-0.10599	-5.5353E-05	522.2388848964648	50.097	0.79223	50.101	49.81	50.603	0.0035973					42	17	4	0	0	0	0.021781	1	4247	4247		124.08	17.665	1	592680			53423	4297	35641	35655	60590	60590					-0.055421926619601436
SENKKLSLD	9	Unmodified	_SENKKLSLD_					0	0	0		ENSG00000137776|ENST00000380516|SLTM;nc|ENSG00000137776|Q9NWH9-3|SLTM	ENSG00000137776|ENST00000380516|SLTM	ENSG00000137776|ENST00000380516|SLTM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7921752929688	2	517.279846	1032.54514	-0.96618	-0.00049978	2.8118	0.0014545	1.8457	0.00095472	517.282344161599	87.648	0.20927	88.111	88.018	88.227	0.46311					5	4	2	0	0	0	0.20789	1	10339	10339		26.693	0	1	31273			53424	4234	35642	35656	60591	60591					0.030168313724288964
SENKLPAEL	9	Unmodified	_SENKLPAEL_					0	0	0		ENST00000557159.5_1_14:20924026-20925664:+|nuORF;ENSG00000100823|ENST00000216714|APEX1	ENST00000557159.5_1_14:20924026-20925664:+|nuORF	ENST00000557159.5_1_14:20924026-20925664:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.7680969238281	2	500.769114	999.523675	-1.161	-0.0005814	0.57106	0.00028597	-0.58995	-0.00029543	500.7692951107601	45.242	0.61508	45.706	45.385	46	0.46313					32	14	3	0	0	0	0.059135	3	4198	4186;4198;4210		104.06	6.5841	1	936010			53425	1875	35643	35657	60592;60593;60594	60593					0.023894463437159175
SENKLPAEL	9	Unmodified	_SENKLPAEL_					0	0	0		ENST00000557159.5_1_14:20924026-20925664:+|nuORF;ENSG00000100823|ENST00000216714|APEX1	ENST00000557159.5_1_14:20924026-20925664:+|nuORF	ENST00000557159.5_1_14:20924026-20925664:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.76806640625	2	500.769114	999.523675	-0.63816	-0.00031957	0.016476	8.2504E-06	-0.62168	-0.00031132	500.7690059419846	44.992	0.65214	45.836	45.544	46.196	0.84438					41	15	4	0	0	0	0.096326	2	4178	4178;4192		93.143	22.327	1	849030			53426	1875	35643	35657	60595;60596	60595					0.023894463437159175
SENNRRGL	8	Unmodified	_SENNRRGL_					0	0	0		nc|ENSG00000184226|Q9HC56-2|PCDH9;ENSG00000184226|ENST00000377865|PCDH9	nc|ENSG00000184226|Q9HC56-2|PCDH9	nc|ENSG00000184226|Q9HC56-2|PCDH9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.2513122558594	2	473.246672	944.478791	-0.25967	-0.00012289	3.1589	0.0014949	2.8992	0.001372	473.2481063617417	28.965	1.9145	28.925	28.439	30.354	-0.039907					103	58	4	0	0	0	0.91472	1	1468	1468		44.117	4.864	1	555530			53427	7594	35644	35658	60597	60597					0.00433060321040557
SENPGQTHF	9	Unmodified	_SENPGQTHF_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.72528076171875	2	508.725238	1015.43592	0.1939	9.8643E-05	-0.0043076	-2.1914E-06	0.18959	9.6451E-05	508.72501975292585	31.802	0.7764	31.816	31.468	32.244	0.01366					40	20	3	0	0	0	0.58063	1	1730	1730		47.96	8.938	1	172220			53428	688	35645	35659	60598	60598					-0.07117754527041598
SENPGQTHF	9	Unmodified	_SENPGQTHF_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.72540283203125	2	508.725238	1015.43592	-0.062057	-3.157E-05	0.24693	0.00012562	0.18487	9.4048E-05	508.7251418634259	31.95	0.71365	31.899	31.567	32.281	-0.051031					35	15	3	0	0	0	0.36616	2	1828	1828;1845		60.118	5.3419	1	216630			53429	688	35645	35659	60599;60600	60599					-0.07117754527041598
SENRGRSRVR	10	Unmodified	_SENRGRSRVR_					0	0	0		ENST00000426677.6_2_19:45394513-45394612:+|nuORF	ENST00000426677.6_2_19:45394513-45394612:+|nuORF	ENST00000426677.6_2_19:45394513-45394612:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.837890625	2	608.834508	1215.65446	2.5696	0.0015645	2.4251	0.0014765	4.9947	0.003041	608.8359461538699	110.06	0.58868	110.12	109.94	110.52	0.054062					49	20	3	0	0	0	0.86348	1	13337	13337		31.53	3.4483	1	4210900			53430	11561	35646	35660	60601	60601					0.05526274835142431
SENSRVSHY	9	Unmodified	_SENSRVSHY_					0	0	0		ENSG00000167193|ENST00000300574|CRK;nc|ENSG00000167193|P46108-2|CRK;ENSG00000099942|ENST00000354336|CRKL;chr22:20949927-20953206|62|16.05|0.92|4.13|+|ENST00000411769|CRKL,CRKL	ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.7481079101562	2	539.749244	1077.48394	0.97605	0.00052682	-0.85233	-0.00046004	0.12372	6.6778E-05	539.7486739320326	19.223	0.29514	19.149	19.008	19.303	-0.074974					12	8	2	0	0	0	0.7932	1	400	400		26.693	1.2427	1	29155			53431	6274	35647	35661	60602	60602					-0.051706806069887534
SEPAIKMIY	9	Unmodified	_SEPAIKMIY_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.271484375	2	526.27826	1050.54197	1.0928	0.00057514	-1.7055	-0.00089757	-0.61266	-0.00032243	526.2771179650252	51.075	0.53166	51.826	51.532	52.063	0.75174					25	12	3	0	0	0	0.38563	1	5069	5069		58.782	5.4305	1	640810	+		53432	21492	35648	35662	60603	60603					0.018718649940637988
SEPAIKMIY	9	Unmodified	_SEPAIKMIY_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	526.27826	1050.54197	1.0928	0.00057514	-1.7055	-0.00089757	-0.61266	-0.00032243	526.2771179650252	51.075	0.53166	51.826	51.532	52.063	0.75174	0.10129	-0.00038774	NaN	58.782	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	640810	+		53433	21492	35648	35662							0.018718649940637988
SEPDFVAKFY	10	Unmodified	_SEPDFVAKFY_					0	0	0		ENSG00000179933|ENST00000319074|C14orf119	ENSG00000179933|ENST00000319074|C14orf119	ENSG00000179933|ENST00000319074|C14orf119	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.3067016601562	2	601.790047	1201.56554	-1.4424	-0.00086801	1.777	0.0010694	0.33463	0.00020137	601.7909771170695	70.629	0.63325	70.667	70.346	70.979	0.038055					82	33	3	0	0	0	0.37624	1	6762	6762		65.465	32.715	1	522250			53434	7306	35649	35663	60604	60604					-0.02717997967761221
SEPHILETL	9	Unmodified	_SEPHILETL_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-8|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.7769775390625	2	519.776939	1037.53933	-0.57568	-0.00029923	0.35455	0.00018428	-0.22114	-0.00011494	519.7770738859286	57.979	1.3943	58.373	57.967	59.361	0.39407					86	33	4	0	0	0	0.0018778	2	6068	6050;6068		143.02	57.66	1	1396000			53435	5511	35650	35664	60605;60606	60606					0.022057328607843374
SEPHILETL	9	Unmodified	_SEPHILETL_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-8|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.7764282226562	2	519.776939	1037.53933	0.34818	0.00018098	-0.35649	-0.0001853	-0.0083135	-4.3211E-06	519.7766161824119	57.873	1.084	58.426	57.963	59.047	0.55323					70	26	3	0	0	0	0.0018778	2	6061	6051;6061		143.02	49.013	1	1569000			53436	5511	35650	35664	60607;60608	60608					0.022057328607843374
SEPLTILPL	9	Unmodified	_SEPLTILPL_					0	0	0		ENSG00000143816|ENST00000272164|WNT9A	ENSG00000143816|ENST00000272164|WNT9A	ENSG00000143816|ENST00000272164|WNT9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.796142578125	2	491.794601	981.574648	0.30701	0.00015099	1.9707	0.0009692	2.2778	0.0011202	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.7932	1	3551	3551		18.324	0.95945	1	3201400			53437	4666	35651	35665	60609	60609					0.08312395388577443
SEPPSRGKPPP	11	Unmodified	_SEPPSRGKPPP_					0	0	0		nc|ENSG00000171475|Q8TF74-2|WIPF2;ENSG00000171475|ENST00000323571|WIPF2;ENST00000494757.5_1_17:38375603-38434474:+|nuORF	nc|ENSG00000171475|Q8TF74-2|WIPF2	nc|ENSG00000171475|Q8TF74-2|WIPF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.8060913085938	2	574.806562	1147.59857	-0.92196	-0.00052995	1.5641	0.00089907	0.64217	0.00036912	574.8069824667461	33.956	0.7061	33.951	33.628	34.334	-0.0047379					37	16	4	0	0	0	0.638	1	2007	2007		40.058	4.4399	1	142260			53438	6669	35652	35666	60610	60610					0.03067628874964612
SEPVYSRDD	9	Unmodified	_SEPVYSRDD_					0	0	0			REV__ENST00000504745.1_1_4:113347516-113362363:+|nuORF	REV__ENST00000504745.1_1_4:113347516-113362363:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	534.2340698242188	2	534.235635	1066.45672	0.17307	9.2459E-05	-0.4002	-0.0002138	-0.22714	-0.00012134	534.2353021816766	27.199	0.59001	27.308	27.064	27.654	0.10901					49	27	2	0	0	0	0.71772	1	1067	1067		39.253	2.8061	1	149470	+		53439	16670	35653	35667	60611	60611					-0.07385208938035248
SEQELLSLK	9	Unmodified	_SEQELLSLK_					0	0	0			REV__ENSG00000050555|ENST00000361069|LAMC3	REV__ENSG00000050555|ENST00000361069|LAMC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7888793945312	2	523.790047	1045.56554	0.76893	0.00040276	-0.73136	-0.00038308	0.037568	1.9678E-05	523.7895845560489	55.44	0.87277	55.841	55.446	56.319	0.40101					53	20	4	0	0	0	0.13808	1	5665	5665		85.862	4.3368	1	2415600	+		53440	16377	35654	35668	60612	60612					0.04458002032242803
SEQELLSLK	9	Unmodified	_SEQELLSLK_					0	0	0			REV__ENSG00000050555|ENST00000361069|LAMC3	REV__ENSG00000050555|ENST00000361069|LAMC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7900390625	2	523.790047	1045.56554	0.26308	0.0001378	-0.1325	-6.9404E-05	0.13058	6.8397E-05	523.7899097383568	55.236	0.91744	55.804	55.404	56.322	0.56836					52	21	4	0	0	0	0.026116	1	5689	5689		120.87	0.56247	1	2443100	+		53441	16377	35654	35668	60613	60613					0.04458002032242803
SEQEVKKNRV	10	Unmodified	_SEQEVKKNRV_					0	0	0		ENSG00000204345|ENST00000375352|CD300LD	ENSG00000204345|ENST00000375352|CD300LD	ENSG00000204345|ENST00000375352|CD300LD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.836669921875	2	608.835851	1215.65715	0.093851	5.714E-05	1.7948	0.0010927	1.8887	0.0011499	608.836828431824	110.46	1.0631	110.5	110.23	111.29	0.031738					103	33	4	0	0	0	0.86272	1	12116	12116		24.519	1.4767	1	3714300			53442	8434	35655	35669	60614	60614					0.05794685449427561
SEQHHAAP	8	Unmodified	_SEQHHAAP_					0	0	0			REV__ENST00000572844.1_1_17:7388118-7388172:+|nuORF	REV__ENST00000572844.1_1_17:7388118-7388172:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.7024230957031	2	438.701566	875.388579	0.44449	0.000195	3.6693	0.0016097	4.1138	0.0018047	438.70154141228227	26.442	1.5718	26.487	26.257	27.829	0.045507					60	48	2	0	0	0	0.87064	1	1133	1133		29.15	0.89528	1	44245	+		53443	28952	35656	35670	60615	60615					-0.05409989007387139
SEQHVRIRVIK	11	Unmodified	_SEQHVRIRVIK_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6083679199219	3	455.608882	1363.80482	-1.2087	-0.00055071	0.20199	9.203E-05	-1.0067	-0.00045868	455.6088629206426	71.18	2.4746	71.313	70.49	72.965	0.13356					216	101	3	0	0	0	0.75457	1	6450	6450		21.032	0.19508	1	705050			53444	1598	35657	35671	60616	60616					0.13746621774089363
SEQHVRIRVIK	11	Unmodified	_SEQHVRIRVIK_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6085510253906	3	455.608882	1363.80482	-0.88204	-0.00040187	-0.15867	-7.2292E-05	-1.0407	-0.00047416	455.6087169982617	69.938	2.9068	70.322	69.842	72.749	0.38416					146	73	3	0	0	0	0.6593	1	7782	7782		37.6	3.5134	1	869170			53445	1598	35657	35671	60617	60617					0.13746621774089363
SEQHVRIRVIK	11	Unmodified	_SEQHVRIRVIK_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.60687255859375	3	455.608882	1363.80482	-0.02024	-9.2214E-06	-1.0093	-0.00045987	-1.0296	-0.00046909	455.608304720296	65.806	3.5163	66.359	63.877	67.393	0.5526					173	94	4	0	0	0	0.69071	1	7229	7229		33.039	0	1	1863500			53446	1598	35657	35671	60618	60618					0.13746621774089363
SEQLLLLL	8	Unmodified	_SEQLLLLL_					0	0	0			REV__ENST00000366654.4_1_1:231155326-231155587:-|nuORF	REV__ENST00000366654.4_1_1:231155326-231155587:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.79052734375	2	464.789318	927.564084	0.89139	0.00041431	1.9223	0.00089347	2.8137	0.0013078	464.79003742399567	33.921	1.5866	34.225	33.702	35.289	0.30494					91	38	3	0	0	0	0.47906	1	2480	2480		76.847	0	1	1052300	+		53447	25530	35658	35672	60619	60619					0.09740412734140591
SEQSRRIL	8	Unmodified	_SEQSRRIL_					0	0	0		ENSG00000130935|ENST00000253247|NOL11	ENSG00000130935|ENST00000253247|NOL11	ENSG00000130935|ENST00000253247|NOL11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.77984619140625	2	494.780348	987.546142	-0.074951	-3.7084E-05	0.21159	0.00010469	0.13664	6.7607E-05	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.91472	1	8809	8809		44.117	0	1	651380			53448	3696	35659	35673	60620	60620					0.05187090532012917
SERERDRK	8	Unmodified	_SERERDRK_					0	0	0			REV__nc|ENSG00000168944|Q8N960-2|CEP120	REV__nc|ENSG00000168944|Q8N960-2|CEP120	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.2765502929688	2	538.283786	1074.55302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.135	1	57.24	56.74	57.74	0.1055								0	0	0	0.29596	1	4837	4837		35.618	2.8059	1		+		53449	21538	35660	35674	60621	60621					0.01872403412562562
SEREYKKDF	9	Unmodified	_SEREYKKDF_					0	0	0		nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;ENSG00000183091|ENST00000397345|NEB	nc|ENSG00000183091|P20929-4|NEB	nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.2966918945312	2	601.296027	1200.5775	-0.039284	-2.3621E-05	0.29023	0.00017452	0.25095	0.00015089	601.295823583783	28.392	0.56702	28.428	28.223	28.79	0.03607					34	17	3	0	0	0	0.76419	1	1350	1350		35.152	4.8343	1	85245			53450	7501	35661	35675	60622	60622					-0.014763812245746522
SERGLVPR	8	Unmodified	_SERGLVPR_					0	0	0			REV__ENSG00000214530|ENST00000334805|STARD10	REV__ENSG00000214530|ENST00000334805|STARD10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2641296386719	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.89043	1	8208	8208		35.618	6.4687	1	4814400	+		53451	23656	35662	35676	60623	60623					0.05435722848858404
SERILSKA	8	Unmodified	_SERILSKA_					0	0	0		nc|ENSG00000179873|P59045-3|NLRP11;ENSG00000179873|ENST00000589093|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2664794921875	2	452.266542	902.51853	-0.25934	-0.00011729	-0.94974	-0.00042953	-1.2091	-0.00054683	452.2658103859262	36.504	1.3068	36.785	36.115	37.422	0.28173					85	31	5	0	0	0	0.87064	1	2884	2884		29.15	1.2673	1	1468700			53452	7299	35663	35677	60624	60624					0.06337187271753919
SERLRPSL	8	Unmodified	_SERLRPSL_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27734375	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.86677	1	8614	8614		27.882	0	1	7289200	+		53453	22442	35664	35678	60625	60625					0.06031992020314192
SERLRPSL	8	Unmodified	_SERLRPSL_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2774353027344	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.89043	1	8115	8115		35.618	3.6634	1	6593200	+		53454	22442	35664	35678	60626	60626					0.06031992020314192
SERPLSKIE	9	Unmodified	_SERPLSKIE_					0	0	0			REV__nc|ENSG00000139144|O75747-2|PIK3C2G	REV__nc|ENSG00000139144|O75747-2|PIK3C2G	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2808837890625	2	529.795663	1057.57677	-0.49879	-0.00026425	3.1685	0.0016786	2.6697	0.0014144	529.7972469463798	61.778	0.32203	61.808	61.721	62.043	0.029575					18	11	2	0	0	0	0.20789	1	5776	5776		66.429	11.653	1	135480	+		53455	15527	35665	35679	60627	60627					0.05028824126361542
SERRANRCF	9	Unmodified	_SERRANRCF_					0	0	0			REV__ENST00000560340.5_1_15:86126375-86128954:+|nuORF	REV__ENST00000560340.5_1_15:86126375-86128954:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.7786254882812	2	569.780356	1137.54616	-0.34656	-0.00019746	-3.659	-0.0020848	-4.0056	-0.0022823	569.7780779655194	23.853	0.60036	23.908	23.63	24.23	0.055487					40	15	3	0	0	0	0.74721	1	806	806		37.159	0.71236	1	132980	+		53456	28757	35666	35680	60628	60628					-0.017112327396716864
SERRASRRRRK	11	Unmodified	_SERRASRRRRK_					0	0	0		nc|ENSG00000150510|Q86V42-3|FAM124A;ENSG00000150510|ENST00000322475|FAM124A;nc|ENSG00000150510|Q86V42-2|FAM124A	nc|ENSG00000150510|Q86V42-3|FAM124A	nc|ENSG00000150510|Q86V42-3|FAM124A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.6272888183594	3	486.625929	1456.85596	3.9672	0.0019305	-0.65367	-0.00031809	3.3135	0.0016125	486.625118109721	105.82	0.62193	106	105.69	106.32	0.18647					37	18	3	0	0	0	0.77803	1	12945	12945		15.921	3.9883	1	272160			53457	5068	35667	35681	60629	60629					0.1458038359148759
SERRKAKK	8	Unmodified	_SERRKAKK_					0	0	0			REV__ENSG00000166292|ENST00000424486|TMEM100	REV__ENSG00000166292|ENST00000424486|TMEM100	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904968261719	2	501.811982	1001.60941	0.67628	0.00033937	2.0672	0.0010373	2.7434	0.0013767	501.81347246488093	86.613	0.17056	86.762	86.613	86.783	0.14902					5	3	2	0	0	0	0.4196	1	8522	8522		20.482	9.6163	1	54043	+		53458	21277	35668	35682	60630	60630					0.10867076039892254
SERVAVALL	9	Unmodified	_SERVAVALL_					0	0	0			REV__ENST00000540837.1_12:9097984-9102109:-|nuORF	REV__ENST00000540837.1_12:9097984-9102109:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27728271484375	2	479.290017	956.565481	-1.5439	-0.00073999	1.9729	0.0009456	0.42899	0.00020561	479.29102637134554	83.958	0.30406	84.096	84.005	84.309	0.13811					9	6	2	0	0	0	0.20789	1	8121	8121		35.618	2.1027	1	41237	+		53459	16048	35669	35683	60631	60631					0.0854604682289164
SERVCGRQI	9	Unmodified	_SERVCGRQI_					0	0	0		chr1:197421956-197427454|23|15.65|0.53|4.89|+|1|CRB1,CRB1|2	chr1:197421956-197427454|23|15.65|0.53|4.89|+|1|CRB1,CRB1|2	chr1:197421956-197427454|23|15.65|0.53|4.89|+|1|CRB1,CRB1|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2711791992188	2	524.271832	1046.52911	0.71347	0.00037405	-2.2112	-0.0011592	-1.4977	-0.00078519	524.2705766270246	76.14	0.90393	76.538	76.199	77.103	0.39823					51	22	3	0	0	0	0.48102	1	8661	8661		52.937	1.744	1	1523700			53460	36	35670	35684	60632	60632					0.007708466545409465
SERVQLSPV	9	Unmodified	_SERVQLSPV_					0	0	0		ENST00000527257.1_1_11:124972470-124972632:-|nuORF	ENST00000527257.1_1_11:124972470-124972632:-|nuORF	ENST00000527257.1_1_11:124972470-124972632:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.72509765625	2	507.782556	1013.55056	-0.60443	-0.00030692	-0.20675	-0.00010499	-0.81119	-0.00041191	507.7823812799918	31.944	0.36397	31.938	31.723	32.087	-0.0061455					12	7	2	0	0	0	0.20789	1	1774	1774		44.117	9.9443	1	25226			53461	13280	35671	35685	60633	60633					0.04432554954917123
SERVRRVE	8	Unmodified	_SERVRRVE_					0	0	0			REV__ENSG00000104331|ENST00000262644|BPNT2	REV__ENSG00000104331|ENST00000262644|BPNT2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3046875	2	515.791247	1029.56794	-1.2266	-0.00063269	2.8083	0.0014485	1.5816	0.0008158	515.7935227076601	62.522	0.56871	62.522	62.211	62.78	0					35	27	2	0	0	0	0.4196	1	5463	5463		42.396	1.618	1	91908	+		53462	17448	35672	35686	60634	60634					0.05433895280566503
SERVYTIR	8	Unmodified	_SERVYTIR_					0	0	0		ENSG00000112139|ENST00000434837|MDGA1;nc|ENSG00000112139|Q8NFP4-2|MDGA1;nc|ENSG00000139915|Q7Z553|MDGA2;ENSG00000139915|ENST00000399232|MDGA2	ENSG00000112139|ENST00000434837|MDGA1	ENSG00000112139|ENST00000434837|MDGA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2820434570312	2	512.282723	1022.55089	0.037195	1.9054E-05	0.79928	0.00040946	0.83647	0.00042851	512.2826017379747	34.059	0.51579	34.055	33.818	34.334	-0.0047417					23	11	3	0	0	0	0.89494	1	2023	2023		37.159	4.3467	1	49852			53463	2634	35673	35687	60635	60635					0.04051974674769099
SESLHPTVL	9	Unmodified	_SESLHPTVL_					0	0	0		ENSG00000214929|ENST00000344803|SPATA31D1	ENSG00000214929|ENST00000344803|SPATA31D1	ENSG00000214929|ENST00000344803|SPATA31D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7637634277344	2	491.763832	981.513111	0.17598	8.6541E-05	-0.77913	-0.00038315	-0.60315	-0.00029661	491.7633396187307	48.936	1.0063	49.84	49.489	50.496	0.90424					64	24	4	0	0	0	0.58151	1	4753	4753		47.916	0	1	5497800			53464	8641	35674	35688	60636	60636					0.02161463689287757
SESLVHESW	9	Unmodified	_SESLVHESW_					0	0	0		nc|ENSG00000100242|Q9UH99-3|SUN2;ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	537.2483520507812	2	537.248546	1072.48254	-0.03044	-1.6354E-05	0.24895	0.00013375	0.21851	0.0001174	537.2485523020005	51.288	0.72694	51.285	50.93	51.657	-0.0020447					41	16	4	0	0	0	0.062302	2	4389	4377;4389		102.77	51.438	1	357990			53465	14812	35675	35689	60637;60638	60638					-0.050803146957377976
SESLVHESW	9	Unmodified	_SESLVHESW_					0	0	0		nc|ENSG00000100242|Q9UH99-3|SUN2;ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.2495727539062	2	537.248546	1072.48254	0.056529	3.037E-05	-0.097361	-5.2307E-05	-0.040832	-2.1937E-05	537.248548860294	51.255	0.66445	51.231	50.944	51.609	-0.02343					37	16	3	0	0	0	0.073112	3	4481	4469;4481;4493		99.375	17.07	1	328750			53466	14812	35675	35689	60639;60640;60641	60640					-0.050803146957377976
SESLVHESW	9	Unmodified	_SESLVHESW_					0	0	0		nc|ENSG00000100242|Q9UH99-3|SUN2;ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.248779296875	2	537.248546	1072.48254	0.31365	0.00016851	-0.19626	-0.00010544	0.11739	6.3067E-05	537.2483003156818	51.32	0.71219	51.327	51.01	51.722	0.0077438					41	16	4	0	0	0	0.053315	2	4404	4404;4420		106.42	42.654	1	351510			53467	14812	35675	35689	60642;60643	60642					-0.050803146957377976
SESNWWDRY	9	Unmodified	_SESNWWDRY_					0	0	0			REV__ENST00000527885.1_1_8:145540848-145541192:-|nuORF	REV__ENST00000527885.1_1_8:145540848-145541192:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	621.7599487304688	2	621.762352	1241.51015	-0.36485	-0.00022685	-2.7726	-0.0017239	-3.1375	-0.0019508	621.7603266877302	73.09	0.5213	73.048	72.779	73.3	-0.042015					48	20	4	0	0	0	0.48102	1	7165	7165		52.937	11.51	1	338140	+		53468	22724	35676	35690	60644	60644					-0.10094411435511574
SESNWWDRY	9	Unmodified	_SESNWWDRY_					0	0	0			REV__ENST00000527885.1_1_8:145540848-145541192:-|nuORF	REV__ENST00000527885.1_1_8:145540848-145541192:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	621.762352	1241.51015	-0.28633	-0.00017803	-2.9058	-0.0018067	-3.1921	-0.0019848	621.7602357128908	73.284	0.59627	73.324	72.978	73.574	0.040024	0.21665	-1.3464E-05	NaN	52.937	49	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	336140	+		53469	22724	35676	35690							-0.10094411435511574
SESNWWDRY	9	Unmodified	_SESNWWDRY_					0	0	0			REV__ENST00000527885.1_1_8:145540848-145541192:-|nuORF	REV__ENST00000527885.1_1_8:145540848-145541192:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	621.762352	1241.51015	-0.36485	-0.00022685	-2.7726	-0.0017239	-3.1375	-0.0019508	621.7603266877302	73.09	0.5213	73.048	72.779	73.3	-0.042015	-0.060113	0.00015216	NaN	52.937	48	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338140	+		53470	22724	35676	35690							-0.10094411435511574
SESNWWDRY	9	Unmodified	_SESNWWDRY_					0	0	0			REV__ENST00000527885.1_1_8:145540848-145541192:-|nuORF	REV__ENST00000527885.1_1_8:145540848-145541192:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	621.762352	1241.51015	-0.34	-0.0002114	-2.9716	-0.0018476	-3.3116	-0.002059	621.7603613905455	72.909	0.56015	72.951	72.683	73.243	0.042114	-0.15653	-9.5216E-05	NaN	52.937	55	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	334340	+		53471	22724	35676	35690							-0.10094411435511574
SESPIEKVL	9	Unmodified	_SESPIEKVL_					0	0	0		ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2790222167969	2	501.279315	1000.54408	-0.017616	-8.8306E-06	0.21123	0.00010589	0.19362	9.7057E-05	501.2792575092603	55.061	1.2338	55.053	54.671	55.905	-0.0077095					56	34	2	0	0	0	0.44421	1	4897	4897		54.776	5.3348	1	342470			53472	3743	35677	35691	60645	60645					0.04382617003534506
SESPIEKVL	9	Unmodified	_SESPIEKVL_					0	0	0		ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2789611816406	2	501.279315	1000.54408	-0.39378	-0.00019739	0.3375	0.00016918	-0.056279	-2.8211E-05	501.2793952319876	55.149	1.4222	55.123	54.587	56.009	-0.025955					71	39	3	0	0	0	0.17181	2	4999	4986;4999		79.713	9.7082	1	380610			53473	3743	35677	35691	60646;60647	60647					0.04382617003534506
SESPIEKVL	9	Unmodified	_SESPIEKVL_					0	0	0		ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2787780761719	2	501.279315	1000.54408	-1.3708	-0.00068715	1.3327	0.00066808	-0.038051	-1.9074E-05	501.27988085218624	55.065	1.2271	55.092	54.682	55.909	0.027142					63	31	3	0	0	0	0.19818	2	4939	4921;4939		74.255	17.534	1	423870			53474	3743	35677	35691	60648;60649	60649					0.04382617003534506
SESPIVVVL	9	Unmodified	_SESPIVVVL_					0	0	0		nc|ENSG00000140612|P67812-2|SEC11A;ENSG00000140612|ENST00000268220|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A;nc|ENSG00000140612|P67812-3|SEC11A;ENST00000585864.1_1_18:56807180-56819918:+|nuORF;ENSG00000166562|ENST00000587834|SEC11C	nc|ENSG00000140612|P67812-2|SEC11A;ENST00000585864.1_1_18:56807180-56819918:+|nuORF	nc|ENSG00000140612|P67812-2|SEC11A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.7789611816406	2	471.778951	941.543348	-0.3072	-0.00014493	0.086279	4.0705E-05	-0.22092	-0.00010423	471.7788353055033	81.895	1.368	82.322	81.921	83.289	0.42646					68	33	4	0	0	0	0.25826	1	9460	9460		68.485	0	1	2126100			53475	4451;6209	35678	35692	60650	60650					0.070238223544834
SESPIVVVL	9	Unmodified	_SESPIVVVL_					0	0	0		nc|ENSG00000140612|P67812-2|SEC11A;ENSG00000140612|ENST00000268220|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A;nc|ENSG00000140612|P67812-3|SEC11A;ENST00000585864.1_1_18:56807180-56819918:+|nuORF;ENSG00000166562|ENST00000587834|SEC11C	nc|ENSG00000140612|P67812-2|SEC11A;ENST00000585864.1_1_18:56807180-56819918:+|nuORF	nc|ENSG00000140612|P67812-2|SEC11A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.77947998046875	2	471.778951	941.543348	-0.65012	-0.00030671	0.67197	0.00031702	0.021851	1.0309E-05	471.77898452212014	81.892	1.4081	82.392	81.953	83.361	0.49967					75	34	4	0	0	0	0.17071	1	9474	9474		79.939	11.455	1	2439200			53476	4451;6209	35678	35692	60651	60651					0.070238223544834
SESRASSPPD	10	Unmodified	_SESRASSPPD_					0	0	0		ENST00000474097.5_1_7:6620192-6623202:+|nuORF	ENST00000474097.5_1_7:6620192-6623202:+|nuORF	ENST00000474097.5_1_7:6620192-6623202:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7344970703125	2	516.73326	1031.45197	-0.60742	-0.00031387	2.6693	0.0013793	2.0619	0.0010654	516.7345818626145	43.548	0.68573	43.546	43.282	43.968	-0.002449					27	16	2	0	0	0	0.60985	1	3365	3365		49.536	7.1399	1	179990			53477	12299	35679	35693	60652	60652					-0.06250093080802799
SESSDSGSGFW	11	Unmodified	_SESSDSGSGFW_					0	0	0		ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	ENSG00000126709|ENST00000361157|IFI6	ENSG00000126709|ENST00000361157|IFI6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.22216796875	2	573.222725	1144.4309	-1.064	-0.00060989	1.166	0.0006684	0.10206	5.8505E-05	573.2231995968186	62.962	0.91174	62.957	62.634	63.545	-0.0055504					93	41	3	0	0	0	3.2222999999999997E-28	4	5846	5836;5846;5853;5860		176.09	109.66	1	653800			53478	3461	35680	35694	60653;60654;60655;60656	60654					-0.1355410318030863
SESSDSGSGFW	11	Unmodified	_SESSDSGSGFW_					0	0	0		ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	ENSG00000126709|ENST00000361157|IFI6	ENSG00000126709|ENST00000361157|IFI6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.2244262695312	2	573.222725	1144.4309	0.10036	5.753E-05	0.017199	9.8587E-06	0.11756	6.7389E-05	573.2225957575941	62.882	0.87394	62.848	62.48	63.354	-0.033714					94	39	3	0	0	0	1.4687E-28	6	5946	5932;5939;5946;5954;5962;5972		180.93	121	1	707860			53479	3461	35680	35694	60657;60658;60659;60660;60661;60662	60659					-0.1355410318030863
SESSDSGSGFW	11	Unmodified	_SESSDSGSGFW_					0	0	0		ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	ENSG00000126709|ENST00000361157|IFI6	ENSG00000126709|ENST00000361157|IFI6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.22509765625	2	573.222725	1144.4309	-0.44731	-0.00025641	0.73436	0.00042095	0.28704	0.00016454	573.2230210234471	62.786	0.79281	62.814	62.541	63.334	0.02813					81	35	3	0	0	0	1.4681000000000001E-97	5	5867	5852;5860;5867;5874;5882		231.3	140.93	1	587830			53480	3461	35680	35694	60663;60664;60665;60666;60667	60665					-0.1355410318030863
SESTVHKRH	9	Unmodified	_SESTVHKRH_					0	0	0		ENSG00000143520|ENST00000388718|FLG2;CON__Q5D862	ENSG00000143520|ENST00000388718|FLG2	ENSG00000143520|ENST00000388718|FLG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.7816772460938	2	540.780879	1079.5472	1.0157	0.00054928	1.0312	0.00055764	2.0469	0.0011069	540.7813808375619	59.963	0.80314	59.932	59.445	60.248	-0.031727					33	20	2	0	0	0	0.76764	1	5634	5634		34.173	0	1	212770		+	53481	626	35681	35695	60668	60668					0.010613049009180031
SESVLSPD	8	Unmodified	_SESVLSPD_					0	0	0			REV__ENST00000608023.5_1_1:207989272-207989374:-|nuORF	REV__ENST00000608023.5_1_1:207989272-207989374:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.9154968261719	2	417.19799	832.381428	-0.39641	-0.00016538	-1.0195	-0.00042533	-1.4159	-0.00059071	417.1974670447711	30.815	0.26641	30.895	30.767	31.033	0.079836					6	5	2	0	0	0	0.4196	1	2036	2036		30.504	5.0535	1	14193	+		53482	29394	35682	35696	60669	60669					-0.04146766398469026
SETDWGCSQ	9	Unmodified	_SETDWGCSQ_					0	0	0			REV__ENSG00000174007|ENST00000409690|CEP19	REV__ENSG00000174007|ENST00000409690|CEP19	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.605712890625	2	506.687464	1011.36037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.827	1	34.865	34.365	35.365	0.038643								0	0	0	0.31437	1	1787	1787		25.574	2.0514	1		+		53483	21969	35683	35697	60670	60670					-0.14485099769626686
SETNDTKVL	9	Unmodified	_SETNDTKVL_					0	0	0		ENST00000453838.2_1_1:182928211-182928406:-|nuORF;ENSG00000111057|ENST00000388835|KRT18	ENST00000453838.2_1_1:182928211-182928406:-|nuORF	ENST00000453838.2_1_1:182928211-182928406:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.7559814453125	2	503.756204	1005.49785	-0.96536	-0.00048631	0.88554	0.0004461	-0.079823	-4.0211E-05	503.75639008045766	31.348	0.78025	31.428	31.033	31.814	0.079834					34	16	3	0	0	0	0.11055	1	2116	2116		90.37	16.115	1	454940			53484	11935	35684	35698	60671	60671					-0.004674478985634778
SETNDTKVL	9	Unmodified	_SETNDTKVL_					0	0	0		ENST00000453838.2_1_1:182928211-182928406:-|nuORF;ENSG00000111057|ENST00000388835|KRT18	ENST00000453838.2_1_1:182928211-182928406:-|nuORF	ENST00000453838.2_1_1:182928211-182928406:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.7555236816406	2	503.756204	1005.49785	0.86048	0.00043347	-1.1789	-0.00059386	-0.31838	-0.00016039	503.755421314307	31.348	0.77067	31.352	30.971	31.742	0.0037212					36	17	3	0	0	0	0.24527	1	2146	2146		69.628	11.816	1	531440			53485	11935	35684	35698	60672	60672					-0.004674478985634778
SETPFSRKRK	10	Unmodified	_SETPFSRKRK_					0	0	0		FLAM_C_dup760|chr1:48196212-48196347:-|4.149182167503632|0.107020745204949|5.28|63.0|1|1|sense;FLAM_C_dup3283|chr2:139892397-139892532:+|1.495483639408985|0.0407175791723385|5.2|63.0|1|1|sense;FLAM_C_dup23873|chr22:42601229-42601364:+|2.202136515227762|0.2153033312928709|3.35|63.0|1|1|sense;FLAM_C_dup21389|chr18:66622055-66622190:+|15.832284238591315|0.461968789959625|5.1|62.0|1|1|sense;FLAM_C_dup19394|chr16:67810988-67811123:-|7.653914888466441|0.1895361010017829|5.34|63.0|1|1|sense	FLAM_C_dup760|chr1:48196212-48196347:-|4.149182167503632|0.107020745204949|5.28|63.0|1|1|sense	FLAM_C_dup760|chr1:48196212-48196347:-|4.149182167503632|0.107020745204949|5.28|63.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.345458984375	2	618.346386	1234.67822	0.89263	0.00055195	-1.663	-0.0010283	-0.77033	-0.00047633	618.3452359789501	97.829	3.1632	97.989	96.92	100.08	0.16073					214	73	4	0	0	0	0.8608	1	10179	10179		34.173	0	1	874220			53486	14496	35685	35699	60673	60673					0.07026695548938733
SETSFLPRI	9	Unmodified	_SETSFLPRI_					0	0	0		ENST00000484352.5_1_2:74757313-74758690:+|nuORF;nc|ENSG00000115317|O43464-4|HTRA2;ENST00000484881.5_1_2:74756974-74758788:+|nuORF	ENST00000484352.5_1_2:74757313-74758690:+|nuORF	ENST00000484352.5_1_2:74757313-74758690:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.2868041992188	2	525.284931	1048.55531	0.29891	0.00015701	-0.093768	-4.9255E-05	0.20514	0.00010776	525.2849006887911	51.576	0.52666	51.589	51.398	51.925	0.012436					22	12	2	0	0	0	0.71772	1	4462	4462		39.253	0	1	98399			53487	12534	35686	35700	60674	60674					0.032974390976505674
SETSFLPRI	9	Unmodified	_SETSFLPRI_					0	0	0		ENST00000484352.5_1_2:74757313-74758690:+|nuORF;nc|ENSG00000115317|O43464-4|HTRA2;ENST00000484881.5_1_2:74756974-74758788:+|nuORF	ENST00000484352.5_1_2:74757313-74758690:+|nuORF	ENST00000484352.5_1_2:74757313-74758690:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	525.284931	1048.55531	-0.22613	-0.00011878	0.2527	0.00013274	0.026575	1.3959E-05	525.2848756806804	51.568	0.4157	51.544	51.325	51.741	-0.02343	-0.053143	0.00016686	NaN	39.253	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94540			53488	12534	35686	35700							0.032974390976505674
SETSRSAPV	9	Unmodified	_SETSRSAPV_					0	0	0			REV__ENST00000303657.9_1_19:5993631-5994159:-|nuORF	REV__ENST00000303657.9_1_19:5993631-5994159:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2337341308594	2	467.235439	932.456324	-0.1712	-7.9989E-05	-4.2884	-0.0020037	-4.4596	-0.0020837	467.23319803084024	63.608	0.87678	64.163	63.641	64.518	0.5545					48	20	3	0	0	0	0.76255	1	6853	6853		35.618	0.41757	1	243430	+		53489	24803	35687	35701	60675	60675					-0.012605838672357095
SETSVPDHVVW	11	Unmodified	_SETSVPDHVVW_					0	0	0		ENSG00000185201|ENST00000616316|IFITM2;ENSG00000185885|ENST00000408968|IFITM1;ENSG00000142089|ENST00000399808|IFITM3	ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	628.2996215820312	2	628.30131	1254.58807	0.24905	0.00015648	-0.063416	-3.9845E-05	0.18563	0.00011663	628.3011362452474	60.68	0.60736	60.647	60.355	60.963	-0.032509					41	17	3	0	0	0	0.15108	1	5731	5731		82.241	21.269	1	391050			53490	7687	35688	35702	60676	60676					-0.029043985701491692
SETSVPDHVVW	11	Unmodified	_SETSVPDHVVW_					0	0	0		ENSG00000185201|ENST00000616316|IFITM2;ENSG00000185885|ENST00000408968|IFITM1;ENSG00000142089|ENST00000399808|IFITM3	ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	628.29931640625	2	628.30131	1254.58807	-0.78884	-0.00049563	0.63681	0.00040011	-0.15203	-9.5519E-05	628.3015459313211	60.618	0.66589	60.649	60.311	60.977	0.0312					43	19	3	0	0	0	0.32928	1	5637	5637		67.494	3.9598	1	370500			53491	7687	35688	35702	60677	60677					-0.029043985701491692
SETSVPDHVVW	11	Unmodified	_SETSVPDHVVW_					0	0	0		ENSG00000185201|ENST00000616316|IFITM2;ENSG00000185885|ENST00000408968|IFITM1;ENSG00000142089|ENST00000399808|IFITM3	ENSG00000185201|ENST00000616316|IFITM2	ENSG00000185201|ENST00000616316|IFITM2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	628.30131	1254.58807	-0.21146	-0.00013286	0.25957	0.00016309	0.048119	3.0233E-05	628.3015001923162	60.775	0.5864	60.763	60.48	61.067	-0.012203	0.076293	-4.1049E-05	NaN	82.241	42	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	325770			53492	7687	35688	35702							-0.029043985701491692
SEVDLTRSF	9	Unmodified	_SEVDLTRSF_					0	0	0		nc|ENSG00000100938|Q9P2T1-3|GMPR2;ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2	nc|ENSG00000100938|Q9P2T1-3|GMPR2	nc|ENSG00000100938|Q9P2T1-3|GMPR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.26416015625	2	527.264196	1052.51384	-0.0014859	-7.8348E-07	0.24591	0.00012966	0.24442	0.00012887	527.2642340285485	56.043	0.51533	56.033	55.713	56.228	-0.010136					38	15	3	0	0	0	0.010555	5	5006	4999;5006;5016;5027;5038		132.76	47.842	1	493350			53493	1887	35689	35703	60678;60679;60680;60681;60682	60679					-0.01031741661677188
SEVDLTRSF	9	Unmodified	_SEVDLTRSF_					0	0	0		nc|ENSG00000100938|Q9P2T1-3|GMPR2;ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2	nc|ENSG00000100938|Q9P2T1-3|GMPR2	nc|ENSG00000100938|Q9P2T1-3|GMPR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.2633056640625	2	527.264196	1052.51384	0.13196	6.9577E-05	-0.17332	-9.1386E-05	-0.041364	-2.181E-05	527.2640157399171	56.02	0.52116	55.993	55.659	56.18	-0.027279					39	16	3	0	0	0	0.010555	4	5109	5100;5109;5121;5132		132.76	39.562	1	674330			53494	1887	35689	35703	60683;60684;60685;60686	60684					-0.01031741661677188
SEVDLTRSF	9	Unmodified	_SEVDLTRSF_					0	0	0		nc|ENSG00000100938|Q9P2T1-3|GMPR2;ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2	nc|ENSG00000100938|Q9P2T1-3|GMPR2	nc|ENSG00000100938|Q9P2T1-3|GMPR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.2638549804688	2	527.264196	1052.51384	-0.054609	-2.8793E-05	0.0019191	1.0119E-06	-0.05269	-2.7781E-05	527.2641168910368	56.003	0.50456	56.034	55.689	56.193	0.030838					34	13	3	0	0	0	0.0062975	4	5035	5035;5046;5057;5070		136.27	41.327	1	602480			53495	1887	35689	35703	60687;60688;60689;60690	60687					-0.01031741661677188
SEVDRLKAK	9	Unmodified	_SEVDRLKAK_					0	0	0		ENSG00000163645|ENST00000295910|ERICH6;nc|ENSG00000163645|Q7L0X2-2|ERICH6;nc|ENSG00000163645|Q7L0X2-3|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	ENSG00000163645|ENST00000295910|ERICH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.303955078125	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.71772	1	10761	10761		39.253	0.44669	1	11944000			53496	5847	35690	35704	60691	60691					0.07224530363282611
SEVILHHEY	9	Unmodified	_SEVILHHEY_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.7798461914062	2	563.780013	1125.54547	-1.2408	-0.00069953	1.0136	0.00057144	-0.22721	-0.0001281	563.7805361041682	35.944	0.63938	35.926	35.647	36.286	-0.018673					27	13	3	0	0	0	0.38563	2	2268	2257;2268		58.782	11.125	1	123770			53497	4683	35691	35705	60692;60693	60693					-0.012277489077177961
SEVILHHEY	9	Unmodified	_SEVILHHEY_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.7801513671875	2	563.780013	1125.54547	-0.50319	-0.00028369	0.50874	0.00028682	0.0055458	3.1266E-06	563.780155124029	35.963	0.59452	35.907	35.651	36.245	-0.055901					26	12	3	0	0	0	0.18601	1	2363	2363		76.774	32.657	1	155260			53498	4683	35691	35705	60694	60694					-0.012277489077177961
SEVILHHEY	9	Unmodified	_SEVILHHEY_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.77978515625	2	563.780013	1125.54547	-0.42606	-0.00024021	0.27158	0.00015311	-0.15448	-8.7094E-05	563.7800481327839	35.957	0.59704	35.967	35.614	36.211	0.0092773					29	12	3	0	0	0	0.18601	3	2300	2283;2289;2300		76.774	10.345	1	131860			53499	4683	35691	35705	60695;60696;60697	60697					-0.012277489077177961
SEVLKARHKLE	11	Unmodified	_SEVLKARHKLE_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.25628662109375	3	437.257738	1308.75138	-1.8162	-0.00079416	0.9439	0.00041273	-0.87234	-0.00038144	437.25811872267985	97.401	1.8116	97.603	96.66	98.472	0.20207					102	41	3	0	0	0	0.75121	1	10055	10055		21.78	0.74819	1	205480			53500	4726	35692	35706	60698	60698					0.10935824271564343
SEVLPISKLLT	11	Unmodified	_SEVLPISKLLT_					0	0	0			REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.5799865722656	3	400.579706	1198.71729	2.7175	0.0010886	-0.78513	-0.00031451	1.9324	0.00077408	400.9139207578905	114.7	0.29166	114.68	114.57	114.86	-0.024452					16	11	2	0	0	0	0.77205	1	12715	12715		17.167	0	1	63094	+		53501	18153	35693	35707	60699	60699					0.1258798305993878
SEVLPISKLLT	11	Unmodified	_SEVLPISKLLT_					0	0	0			REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5805358886719	3	400.579706	1198.71729	3.1805	0.001274	-1.4901	-0.00059689	1.6904	0.00067715	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.69071	2	12342	12342;12374		33.039	5.3955	1	4827300	+		53502	18153	35693	35707	60700;60701	60700					0.1258798305993878
SEVLPISKLLT	11	Unmodified	_SEVLPISKLLT_					0	0	0			REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.58038330078125	3	400.579706	1198.71729	-1.7912	-0.00071753	3.9801	0.0015944	2.1889	0.00087682	400.5810902225448	111.65	0.42501	111.76	111.55	111.97	0.11118					38	12	4	0	0	0	0.72374	2	12052	12046;12052		27.644	2.5179	1	12328000	+		53503	18153	35693	35707	60702;60703	60703					0.1258798305993878
SEVLPISKLLT	11	Unmodified	_SEVLPISKLLT_					0	0	0			REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.5802001953125	3	400.579706	1198.71729	-1.929	-0.00077271	4.0903	0.0016385	2.1613	0.00086577	400.58129114013644	113.14	0.20975	113.11	113.01	113.22	-0.032326					13	5	3	0	0	0	0.72892	1	12069	12069		26.75	1.1757	1	2499500	+		53504	18153	35693	35707	60704	60704					0.1258798305993878
SEVLPISKLLT	11	Unmodified	_SEVLPISKLLT_					0	0	0			REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	REV__ENST00000498486.1_1_2:172336502-172337621:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	400.579706	1198.71729	-1.929	-0.00077271	4.0903	0.0016385	2.1613	0.00086577	400.58129114013644	113.14	0.20975	113.11	113.01	113.22	-0.032326	0.17602	0.002865	NaN	26.75	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2499500	+		53505	18153	35693	35707							0.1258798305993878
SEVPIRLDY	9	Unmodified	_SEVPIRLDY_					0	0	0		ENSG00000066739|ENST00000359933|ATG2B;ENST00000261834.9_1_14:96756535-96777546:-|nuORF	ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.2911987304688	2	546.290214	1090.56587	0.68256	0.00037287	-0.011535	-6.3015E-06	0.67102	0.00036657	546.2898517199174	62.718	0.57383	62.684	62.424	62.997	-0.03371					41	25	3	0	0	0	0.34325	2	5928	5928;5943		61.691	21.282	1	122070			53506	1166	35694	35708	60705;60706	60705					0.02421421752092101
SEVPIRLDY	9	Unmodified	_SEVPIRLDY_					0	0	0		ENSG00000066739|ENST00000359933|ATG2B;ENST00000261834.9_1_14:96756535-96777546:-|nuORF	ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.2893676757812	2	546.290214	1090.56587	-0.42874	-0.00023422	0.59914	0.0003273	0.17039	9.3085E-05	546.2904747996675	62.685	0.43213	62.713	62.414	62.846	0.02813					31	19	2	0	0	0	0.39367	1	5853	5853		58.23	13.699	1	80098			53507	1166	35694	35708	60707	60707					0.02421421752092101
SEVPIRLDY	9	Unmodified	_SEVPIRLDY_					0	0	0		ENSG00000066739|ENST00000359933|ATG2B;ENST00000261834.9_1_14:96756535-96777546:-|nuORF	ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	546.290214	1090.56587	-0.3732	-0.00020388	0.21184	0.00011572	-0.16137	-8.8154E-05	546.290162777225	62.855	0.44324	62.85	62.615	63.058	-0.0055504	0.10045	-0.0001172	NaN	61.691	31	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95199			53508	1166	35694	35708							0.02421421752092101
SEVQDRVML	9	Unmodified	_SEVQDRVML_					0	0	0		ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.7733764648438	2	538.773874	1075.53319	-1.2342	-0.00066496	0.58789	0.00031674	-0.64632	-0.00034822	538.7739230008748	47.443	0.62655	47.914	47.607	48.233	0.47139					35	15	3	0	0	0	0.15708	1	4514	4514		82.75	0.50997	1	2358300			53509	3097	35695	35709	60708	60708					-0.001551086423887682
SEVQDRVML	9	Unmodified	_SEVQDRVML_					0	0	0		ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7733154296875	2	538.773874	1075.53319	-1.4897	-0.0008026	0.79849	0.00043021	-0.69118	-0.00037239	538.7739910553701	47.2	0.67542	48.123	47.827	48.503	0.92315					39	16	4	0	0	0	0.12688	2	4497	4484;4497		87.696	25.589	1	2427300			53510	3097	35695	35709	60709;60710	60710					-0.001551086423887682
SEVQDRVML	9	Oxidation (M)	_SEVQDRVM(Oxidation (M))L_		SEVQDRVM(1)L		SEVQDRVM(77)L	0	0	1		ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.7694702148438	2	546.771331	1091.52811	-1.6526	-0.00090359	-0.041011	-2.2423E-05	-1.6936	-0.00092601	546.7710427915036	43.803	0.57198	44.576	44.303	44.875	0.7738					30	13	3	0	0	0	0.18338	1	4004	4004		77.318	6.0219	1	1535200			53511	3097	35695	35710	60711	60711		61			-0.013994125050203365
SEVQDRVML	9	Oxidation (M)	_SEVQDRVM(Oxidation (M))L_					0	0	1		ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	546.771331	1091.52811	-1.2123	-0.00066284	-0.333	-0.00018208	-1.5453	-0.00084492	546.7709955677557	44.081	0.65275	44.531	44.2	44.853	0.45024	-0.022612	-0.00010276	NaN	77.318	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1514700			53512	3097	35695	35710				61			-0.013994125050203365
SEVQGKGGVW	10	Unmodified	_SEVQGKGGVW_					0	0	0		ENSG00000240694|ENST00000522362|PNMA2	ENSG00000240694|ENST00000522362|PNMA2	ENSG00000240694|ENST00000522362|PNMA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.7657470703125	2	523.766906	1045.51926	-0.63093	-0.00033046	0.20351	0.00010659	-0.42742	-0.00022387	523.7669631099387	38.056	0.6989	38.006	37.673	38.372	-0.050369					27	15	2	0	0	0	0.30722	2	2651	2641;2651		71.877	6.0743	1	224770			53513	8782	35696	35711	60712;60713	60713					-0.0016801807917090628
SEVQGKGGVW	10	Unmodified	_SEVQGKGGVW_					0	0	0		ENSG00000240694|ENST00000522362|PNMA2	ENSG00000240694|ENST00000522362|PNMA2	ENSG00000240694|ENST00000522362|PNMA2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	523.766906	1045.51926	-1.1425	-0.00059842	0.79406	0.0004159	-0.34846	-0.00018251	523.7672478453521	38.047	0.85861	38.058	37.724	38.582	0.011173	-0.0040307	0.00083079	NaN	71.877	39	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211580			53514	8782	35696	35711							-0.0016801807917090628
SEVRAVDKP	9	Unmodified	_SEVRAVDKP_					0	0	0			REV__ENST00000558674.5_1_14:24566116-24567637:+|nuORF	REV__ENST00000558674.5_1_14:24566116-24567637:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.7745666503906	2	500.774731	999.534909	-1.48	-0.00074115	0.77459	0.0003879	-0.70542	-0.00035326	500.77520179835545	50.501	0.59034	50.501	50.257	50.848	0					34	14	3	0	0	0	0.39367	1	4038	4038		58.23	3.4536	1	183120	+		53515	17227	35697	35712	60714	60714					0.035122684378507074
SEVRSRRR	8	Unmodified	_SEVRSRRR_					0	0	0			REV__ENST00000548049.1_1_6:31082654-31093489:+|nuORF	REV__ENST00000548049.1_1_6:31082654-31093489:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303466796875	2	523.302313	1044.59007	-0.041207	-2.1563E-05	2.4281	0.0012706	2.3869	0.0012491	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.87479	1	8925	8925		30.504	0.18592	1	12431000	+		53516	28561	35698	35713	60715	60715					0.0695611974899748
SEVVAIKKM	9	Unmodified	_SEVVAIKKM_					0	0	0		ENSG00000149930|ENST00000308893|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2;nc|ENSG00000149930|Q9UL54-2|TAOK2;ENSG00000135090|ENST00000392533|TAOK3	ENSG00000149930|ENST00000308893|TAOK2;ENSG00000135090|ENST00000392533|TAOK3	ENSG00000149930|ENST00000308893|TAOK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.28387451171875	2	502.794078	1003.5736	0.0035115	1.7655E-06	1.7819	0.00089592	1.7854	0.00089768	503.2961086676123	54.345	0.7513	54.93	54.543	55.295	0.58474					23	17	2	0	0	0	0.20789	1	5566	5566		29.15	0	1	87190			53517	5055;3981	35699	35714	60716	60716					0.07195857748013168
SEVVRLPYP	9	Unmodified	_SEVVRLPYP_					0	0	0		ENSG00000134153|ENST00000256545|EMC7	ENSG00000134153|ENST00000256545|EMC7	ENSG00000134153|ENST00000256545|EMC7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.293212890625	2	530.295299	1058.57605	0.74166	0.0003933	-4.3452	-0.0023043	-3.6036	-0.001911	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.73802	1	9040	9040		37.812	2.1932	1	2081200			53518	3912	35700	35715	60717	60717					0.04910029477309763
SEWDGHEEL	9	Unmodified	_SEWDGHEEL_					0	0	0		ENST00000605039.5_1_12:51696457-51717886:-|nuORF;nc|ENSG00000110934|Q9UBW5-2|BIN2;nc|ENSG00000110934|Q9UBW5-3|BIN2;ENSG00000110934|ENST00000615107|BIN2	ENST00000605039.5_1_12:51696457-51717886:-|nuORF	ENST00000605039.5_1_12:51696457-51717886:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.228271484375	2	551.22781	1100.44107	-1.6016	-0.00088285	1.4683	0.00080937	-0.13329	-7.347E-05	551.228423526518	48.229	0.56927	48.698	48.426	48.995	0.46941					31	13	3	0	0	0	0.31972	1	4635	4635		63.306	13.865	1	678140			53519	2555	35701	35716	60718	60718					-0.10513495455097654
SEWDGHEEL	9	Unmodified	_SEWDGHEEL_					0	0	0		ENST00000605039.5_1_12:51696457-51717886:-|nuORF;nc|ENSG00000110934|Q9UBW5-2|BIN2;nc|ENSG00000110934|Q9UBW5-3|BIN2;ENSG00000110934|ENST00000615107|BIN2	ENST00000605039.5_1_12:51696457-51717886:-|nuORF	ENST00000605039.5_1_12:51696457-51717886:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	551.22781	1100.44107	-0.52946	-0.00029185	0.47212	0.00026024	-0.057346	-3.1611E-05	551.2278668378403	48.014	0.48316	48.937	48.704	49.187	0.92315	0.11946	-0.0005561	NaN	63.306	29	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	687490			53520	2555	35701	35716							-0.10513495455097654
SEYLRYEDTL	10	Unmodified	_SEYLRYEDTL_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	644.8070678710938	2	644.806425	1287.5983	-1.1033	-0.0007114	0.9868	0.0006363	-0.11648	-7.5107E-05	644.8070194073331	57.848	0.7712	58.242	57.967	58.738	0.39408					38	18	3	0	0	0	0.14207	1	6027	6027		96.034	33.926	1	1188500			53521	8948	35702	35717	60719	60719					-0.033998356355596115
SEYLRYEDTL	10	Unmodified	_SEYLRYEDTL_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	644.806425	1287.5983	1.9319	0.0012457	-1.7294	-0.0011151	0.20253	0.00013059	644.8051842896105	57.758	0.83147	58.312	57.926	58.758	0.55395	0.035072	-0.0020721	NaN	96.034	46	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1088900			53522	8948	35702	35717							-0.033998356355596115
SFAALVLRHC	10	Unmodified	_SFAALVLRHC_					0	0	0			REV__ENSG00000187715|ENST00000405109|KBTBD12	REV__ENSG00000187715|ENST00000405109|KBTBD12	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.8028564453125	2	558.802768	1115.59098	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.268	1	31.217	30.717	31.717	-0.051031								0	0	0	0.45132	1	1758	1758		34.173	1.422	1		+		53523	22937	35703	35718	60720	60720					0.037811980736705664
SFADIPFQA	9	Unmodified	_SFADIPFQA_					0	0	0		ENSG00000161692|ENST00000315005|DBF4B;nc|ENSG00000161692|Q8NFT6-2|DBF4B;nc|ENSG00000161692|Q8NFT6-3|DBF4B;ENST00000527862.1_1_17:42811411-42826726:+|nuORF	ENSG00000161692|ENST00000315005|DBF4B	ENSG00000161692|ENST00000315005|DBF4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.244873046875	2	498.245275	994.475997	-0.0022235	-1.1079E-06	-0.70356	-0.00035054	-0.70578	-0.00035165	498.2448862009121	24.178	2.5171	23.797	22.267	24.785	-0.38178					76	57	2	0	0	0	0.71772	1	1190	1190		39.253	0	1	106150			53524	5652	35704	35719	60721	60721					-0.021462078564923104
SFAETQSMFSI	11	Unmodified	_SFAETQSMFSI_					0	0	0		ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	624.2862548828125	2	624.284271	1246.55399	1.2344	0.00077063	1.4258	0.00089011	2.6602	0.0016607	624.2850050045972	42.11	0.72934	42.114	41.826	42.555	0.0043983					47	19	4	0	0	0	0.62614	1	2795	2795		41.427	2.1738	1	617770			53525	8162	35705	35720	60722	60722					-0.059425630533951335
SFAETQSMFSI	11	Unmodified	_SFAETQSMFSI_					0	0	0		ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	624.284271	1246.55399	-0.95733	-0.00059765	3.2694	0.0020411	2.3121	0.0014434	624.2862876869417	41.854	0.58582	41.854	41.56	42.145	0	-0.14714	0.001273	NaN	41.427	30	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	280950			53526	8162	35705	35720							-0.059425630533951335
SFAETQSMFSI	11	Unmodified	_SFAETQSMFSI_					0	0	0		ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	624.284271	1246.55399	0.15891	9.9203E-05	1.9644	0.0012264	2.1234	0.0013256	624.2853400122345	42.116	0.45643	42.087	41.789	42.245	-0.029461	0.085314	-0.00035636	NaN	41.427	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86692			53527	8162	35705	35720							-0.059425630533951335
SFAETQSMFSI	11	Unmodified	_SFAETQSMFSI_					0	0	0		ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	624.284271	1246.55399	-1.0097	-0.00063032	3.2218	0.0020113	2.2121	0.001381	624.286149296594	41.995	0.41179	41.956	41.775	42.187	-0.038223	-0.044747	0.0012136	NaN	41.427	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85312			53528	8162	35705	35720							-0.059425630533951335
SFAETQSMFSI	11	Unmodified	_SFAETQSMFSI_					0	0	0		ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	624.284271	1246.55399	0.39409	0.00024602	2.114	0.0013197	2.5081	0.0015658	624.2855134888522	42.006	0.67539	42.076	41.745	42.42	0.069641	0.074574	-0.00016962	NaN	41.427	43	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	649780			53529	8162	35705	35720							-0.059425630533951335
SFAETQSMFSI	11	Unmodified	_SFAETQSMFSI_					0	0	0		ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	624.284271	1246.55399	-1.8479	-0.0011536	3.0887	0.0019282	1.2409	0.00077465	624.2859427258804	41.569	0.37695	41.982	41.86	42.237	0.4139	-0.01878	0.0010474	NaN	41.427	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	596530			53530	8162	35705	35720							-0.059425630533951335
SFANGQLSMIA	11	Unmodified	_SFANGQLSMIA_					0	0	0			REV__nc|ENSG00000139263|Q6UXM1-2|LRIG3	REV__nc|ENSG00000139263|Q6UXM1-2|LRIG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.7815551757812	2	569.781699	1137.54884	-0.16859	-9.6059E-05	0.50052	0.00028519	0.33193	0.00018913	569.7818844263716	31.963	0.80886	31.912	31.472	32.281	-0.051031					40	17	3	0	0	0	0.58516	1	1851	1851		45.908	10.29	1	136230	+		53531	19528	35706	35721	60723	60723					-0.014428221253638185
SFANGQLSMIA	11	Unmodified	_SFANGQLSMIA_					0	0	0			REV__nc|ENSG00000139263|Q6UXM1-2|LRIG3	REV__nc|ENSG00000139263|Q6UXM1-2|LRIG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.7805786132812	2	569.781699	1137.54884	0.67965	0.00038725	-0.75731	-0.0004315	-0.077666	-4.4253E-05	569.7811422523122	31.835	0.74542	31.829	31.385	32.131	-0.0061455					35	16	3	0	0	0	0.50531	1	1776	1776		51.528	2.0862	1	146780	+		53532	19528	35706	35721	60724	60724					-0.014428221253638185
SFASKIPAH	9	Unmodified	_SFASKIPAH_					0	0	0			REV__nc|ENSG00000157657|Q5T7W0-2|ZNF618	REV__nc|ENSG00000157657|Q5T7W0-2|ZNF618	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3093566894531	2	479.261259	956.507966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.523	1	67.554	67.054	68.054	0.030571								0	0	0	0.29475	1	6414	6414		32.812	2.4947	1		+		53533	29956	35707	35722	60725	60725					0.02797204617331772
SFATTQEHAP	10	Unmodified	_SFATTQEHAP_					0	0	0		ENST00000448629.5_1_1:1336214-1336388:+|nuORF	ENST00000448629.5_1_1:1336214-1336388:+|nuORF	ENST00000448629.5_1_1:1336214-1336388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.7545166015625	2	544.753995	1087.49344	0.36137	0.00019686	-0.57556	-0.00031354	-0.21418	-0.00011668	544.7534869441903	50.283	0.43923	50.286	50.077	50.516	0.0035934					18	9	2	0	0	0	0.51302	1	4285	4285		54.776	8.8041	1	85604			53534	11861	35708	35723	60726	60726					-0.04680912321487085
SFATTQEHAP	10	Unmodified	_SFATTQEHAP_					0	0	0		ENST00000448629.5_1_1:1336214-1336388:+|nuORF	ENST00000448629.5_1_1:1336214-1336388:+|nuORF	ENST00000448629.5_1_1:1336214-1336388:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	544.753995	1087.49344	-0.19283	-0.00010505	0.18886	0.00010288	-0.0039754	-2.1656E-06	544.7536216137786	50.372	0.49097	50.37	50.031	50.522	-0.0020447	0.059904	0.00041106	NaN	54.776	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84715			53535	11861	35708	35723							-0.04680912321487085
SFATTQEHAP	10	Unmodified	_SFATTQEHAP_					0	0	0		ENST00000448629.5_1_1:1336214-1336388:+|nuORF	ENST00000448629.5_1_1:1336214-1336388:+|nuORF	ENST00000448629.5_1_1:1336214-1336388:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	544.753995	1087.49344	0.072525	3.9508E-05	0.054658	2.9775E-05	0.12718	6.9283E-05	544.7538581703061	50.298	0.56808	50.275	49.944	50.512	-0.02343	-0.035905	0.00026485	NaN	54.776	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89484			53536	11861	35708	35723							-0.04680912321487085
SFAVVMII	8	Unmodified	_SFAVVMII_					0	0	0			REV__ENSG00000211456|ENST00000389061|SACM1L	REV__ENSG00000211456|ENST00000389061|SACM1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2550354003906	2	440.254057	878.493561	-1.055	-0.00046445	4.0449	0.0017808	2.99	0.0013163	440.255692333896	66.85	0.64691	66.903	66.553	67.2	0.052376					60	27	3	0	0	0	0.88915	1	5948	5948		35.201	1.6851	1	260280	+		53537	23597	35709	35724	60727	60727					0.04945416144846604
SFAWLAGVL	9	Unmodified	_SFAWLAGVL_					0	0	0			REV__ENSG00000170929|ENST00000641627|OR1M1	REV__ENSG00000170929|ENST00000641627|OR1M1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.2657165527344	2	482.268553	962.522553	0.52825	0.00025476	-4.2111	-0.0020309	-3.6828	-0.0017761	482.2662373845772	49.818	0.8652	50.266	50.02	50.885	0.44761					42	20	3	0	0	0	0.39977	1	4875	4875		57.811	17.033	1	568050	+		53538	21701	35710	35725	60728	60728					0.03979276765460327
SFCLPVPIL	9	Unmodified	_SFCLPVPIL_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|41|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|41|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|41|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7803955078125	2	494.780439	987.546325	-0.85772	-0.00042438	0.7525	0.00037232	-0.10522	-5.2061E-05	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.69914	1	8685	8685		40.573	3.4135	1	737700			53539	14508	35711	35726	60729	60729					0.052053742076282106
SFCLQYIPK	9	Unmodified	_SFCLQYIPK_					0	0	0			REV__ENST00000268043.8_1_15:65108274-65108469:-|nuORF	REV__ENST00000268043.8_1_15:65108274-65108469:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.788330078125	2	549.786253	1097.55795	-0.5678	-0.00031217	1.8845	0.0010361	1.3167	0.00072392	549.7871709244522	110.43	1.0169	110.37	110.18	111.2	-0.055084					52	35	3	0	0	0	0.78983	1	12020	12020		27.882	2.3082	1	254500	+		53540	24509	35712	35727	60730	60730					0.013075712309500886
SFCTVEQRIK	10	Carbamidomethyl (C)	_SFC(Carbamidomethyl (C))TVEQRIK_	SFC(1)TVEQRIK		SFC(82)TVEQRIK		0	1	0			REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.3250732421875	2	634.326805	1266.63906	-0.64623	-0.00040992	-1.9001	-0.0012053	-2.5463	-0.0016152	634.3256591213016	59.511	1.0707	59.511	59.145	60.216	0					116	43	4	0	0	0	0.21786	2	5160	5160;5178		82.241	10.363	1	1731800	+		53541	15909	35713	35728	60731;60732	60731	210				0.01640227203051836
SFCTVEQRIK	10	Carbamidomethyl (C)	_SFC(Carbamidomethyl (C))TVEQRIK_	SFC(1)TVEQRIK		SFC(66)TVEQRIK		0	1	0			REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.3258666992188	2	634.326805	1266.63906	0.1237	7.8469E-05	-2.8797	-0.0018266	-2.756	-0.0017482	634.325003697221	59.4	2.1536	59.369	58.786	60.939	-0.030888					122	59	4	0	0	0	0.37206	1	5532	5532		66.429	7.6473	1	2917300	+		53542	15909	35713	35728	60733	60733	210				0.01640227203051836
SFCTVEQRIK	10	Carbamidomethyl (C)	_SFC(Carbamidomethyl (C))TVEQRIK_	SFC(1)TVEQRIK		SFC(96)TVEQRIK		0	1	0			REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.325439453125	2	634.326805	1266.63906	-0.43105	-0.00027343	-2.1918	-0.0013903	-2.6228	-0.0016637	634.3254652292756	59.323	2.4593	59.357	58.521	60.98	0.033905					136	70	4	0	0	0	0.14384	3	5476	5444;5476;5488		95.815	15.473	1	3076800	+		53543	15909	35713	35728	60734;60735;60736	60735	210				0.01640227203051836
SFCTVEQRIK	10	Carbamidomethyl (C)	_SFC(Carbamidomethyl (C))TVEQRIK_	SFC(1)TVEQRIK		SFC(69)TVEQRIK		0	1	0			REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3255004882812	2	634.326805	1266.63906	1.4146	0.00089732	-3.7436	-0.0023746	-2.329	-0.0014773	634.3243337496912	59.344	1.2629	59.438	58.987	60.25	0.094063					106	40	4	0	0	0	0.344	1	5056	5056		68.787	6.6794	1	2187100	+		53544	15909	35713	35728	60737	60737	210				0.01640227203051836
SFCTVEQRIK	10	Carbamidomethyl (C)	_SFC(Carbamidomethyl (C))TVEQRIK_	SFC(1)TVEQRIK		SFC(85)TVEQRIK		0	1	0			REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3255615234375	2	634.326805	1266.63906	0.5602	0.00035535	-3.0011	-0.0019037	-2.4409	-0.0015483	634.3248294256873	59.288	1.3651	59.402	58.945	60.31	0.11396					111	43	4	0	0	0	0.20477	2	5081	5081;5093		84.916	13.648	1	2141400	+		53545	15909	35713	35728	60738;60739	60738	210				0.01640227203051836
SFCTVEQRIK	10	Carbamidomethyl (C)	_SFC(Carbamidomethyl (C))TVEQRIK_	SFC(1)TVEQRIK		SFC(90)TVEQRIK		0	1	0			REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	REV__chr7:55982280-55983749|21|36.52|0.93|5.3|+|1|NIPSNAP2,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.325439453125	2	634.326805	1266.63906	-0.16269	-0.0001032	-2.4521	-0.0015555	-2.6148	-0.0016587	634.3251860671769	59.374	1.1226	59.374	59.025	60.147	0.00051117					97	36	4	0	0	0	0.18173	4	5113	5074;5101;5113;5125		90.37	17.605	1	1865700	+		53546	15909	35713	35728	60740;60741;60742;60743	60742	210				0.01640227203051836
SFDITKFFPH	10	Unmodified	_SFDITKFFPH_					0	0	0			REV__ENSG00000131023|ENST00000543571|LATS1	REV__ENSG00000131023|ENST00000543571|LATS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8157958984375	2	619.813856	1237.61316	-0.51228	-0.00031752	0.35335	0.00021901	-0.15893	-9.8506E-05	619.8139227121327	49.495	0.84095	49.471	49.103	49.943	-0.024029					37	18	3	0	0	0	0.42808	1	4245	4245		58.23	5.141	1	164600	+		53547	18930	35714	35729	60744	60744					0.0038570102310586662
SFDITKFFPH	10	Unmodified	_SFDITKFFPH_					0	0	0			REV__ENSG00000131023|ENST00000543571|LATS1	REV__ENSG00000131023|ENST00000543571|LATS1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	619.813856	1237.61316	-0.51228	-0.00031752	0.35335	0.00021901	-0.15893	-9.8506E-05	619.8139227121327	49.495	0.84095	49.471	49.103	49.943	-0.024029	-0.040256	0.00025218	NaN	58.23	37	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164600	+		53548	18930	35714	35729							0.0038570102310586662
SFDIYSTFI	9	Unmodified	_SFDIYSTFI_					0	0	0		nc|ENSG00000183346|Q8IVU9|CABCOCO1;ENSG00000183346|ENST00000648843|CABCOCO1	nc|ENSG00000183346|Q8IVU9|CABCOCO1	nc|ENSG00000183346|Q8IVU9|CABCOCO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.7653198242188	2	546.76604	1091.51753	-1.1156	-0.00060998	0.62165	0.0003399	-0.49396	-0.00027008	546.7661613645445	38.572	0.99902	38.914	38.192	39.191	0.34187					50	24	3	0	0	0	0.43338	1	3190	3190		55.504	2.5675	1	725690			53549	7525	35715	35730	60745	60745					-0.024570718878067055
SFDLLVKNL	9	Unmodified	_SFDLLVKNL_					0	0	0		ENST00000469173.1_1_1:174976108-174977843:+|nuORF;nc|ENSG00000116161|Q9HB71-3|CACYBP;ENSG00000116161|ENST00000367679|CACYBP;ENST00000473925.1_1_1:174969094-174977843:+|nuORF	ENST00000469173.1_1_1:174976108-174977843:+|nuORF	ENST00000469173.1_1_1:174976108-174977843:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.8038330078125	2	524.8055	1047.59645	0.06748	3.5414E-05	-0.6561	-0.00034433	-0.58862	-0.00030891	524.8050141508911	76.391	0.42085	76.959	76.768	77.188	0.56835					27	12	3	0	0	0	0.12688	1	8699	8699		87.696	26.724	1	336740			53550	12193	35716	35731	60746	60746					0.07455200137133033
SFDSALQSV	9	Unmodified	_SFDSALQSV_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2275085449219	2	477.232364	952.450176	-0.96052	-0.00045839	1.8579	0.00088665	0.89737	0.00042825	477.23284916044145	65.771	0.54585	66.324	66.125	66.671	0.5526					27	14	3	0	0	0	0.10914	1	7179	7179		90.601	19.305	1	353370			53551	5220	35717	35732	60747	60747					-0.02795102098764346
SFDSTVRL	8	Unmodified	_SFDSTVRL_					0	0	0		ENSG00000092377|ENST00000383032|TBL1Y;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;ENSG00000101849|ENST00000645353|TBL1X	ENSG00000092377|ENST00000383032|TBL1Y	ENSG00000092377|ENST00000383032|TBL1Y	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.74176025390625	2	462.742899	923.471246	-0.23009	-0.00010647	-0.080228	-3.7125E-05	-0.31032	-0.0001436	462.7427456208909	50.84	0.90896	51.275	50.913	51.822	0.43505					46	21	3	0	0	0	0.28455	4	5015	5005;5015;5027;5039		104.75	27.9	1	4083000			53552	1697	35718	35733	60748;60749;60750;60751	60749					0.006449080007655539
SFDSTVRL	8	Unmodified	_SFDSTVRL_					0	0	0		ENSG00000092377|ENST00000383032|TBL1Y;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;ENSG00000101849|ENST00000645353|TBL1X	ENSG00000092377|ENST00000383032|TBL1Y	ENSG00000092377|ENST00000383032|TBL1Y	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.7421569824219	2	462.742899	923.471246	0.80876	0.00037425	-0.99845	-0.00046203	-0.18969	-8.7777E-05	462.7423259408418	50.677	0.77777	51.429	51.12	51.898	0.75174					44	18	3	0	0	0	6.537E-08	4	5017	4997;5005;5017;5029		152.47	31.85	1	4260200			53553	1697	35718	35733	60752;60753;60754;60755	60754					0.006449080007655539
SFDTGFTSF	9	Unmodified	_SFDTGFTSF_					0	0	0		ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6;nc|ENSG00000105993|O75190-4|DNAJB6;ENST00000487480.1_1_7:157174896-157178337:+|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.71923828125	2	504.71909	1007.42363	-0.48251	-0.00024353	0.51042	0.00025762	0.027911	1.4087E-05	504.719243515064	81.035	0.93694	81.457	81.06	81.997	0.4215					41	22	3	0	0	0	0.10807	2	9322	9322;9333		90.777	24.973	1	1372100			53554	2271	35719	35734	60756;60757	60756					-0.07978790990091511
SFDTGFTSF	9	Unmodified	_SFDTGFTSF_					0	0	0		ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6;nc|ENSG00000105993|O75190-4|DNAJB6;ENST00000487480.1_1_7:157174896-157178337:+|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.7193298339844	2	504.71909	1007.42363	0.63018	0.00031806	-0.66535	-0.00033581	-0.03517	-1.7751E-05	504.7186262103346	80.921	0.97926	81.447	81.12	82.099	0.52676					45	23	3	0	0	0	0.073112	3	9353	9341;9353;9365		99.375	16.553	1	1349700			53555	2271	35719	35734	60758;60759;60760	60759					-0.07978790990091511
SFDWYIKT	8	Unmodified	_SFDWYIKT_					0	0	0		ENSG00000169896|ENST00000544665|ITGAM;nc|ENSG00000169896|P11215-2|ITGAM	ENSG00000169896|ENST00000544665|ITGAM	ENSG00000169896|ENST00000544665|ITGAM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.2733154296875	2	530.260925	1058.5073	0.31315	0.00016605	-0.43978	-0.0002332	-0.12663	-6.7147E-05	530.2607202225706	74.895	0.5003	75.286	75.154	75.654	0.3911					14	11	2	0	0	0	0.4196	1	8469	8469		29.15	5.6269	1	79555			53556	6538	35720	35735	60761	60761					-0.019616348223962632
SFEGVALFL	9	Unmodified	_SFEGVALFL_					0	0	0			REV__ENSG00000121377|ENST00000240687|TAS2R7	REV__ENSG00000121377|ENST00000240687|TAS2R7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.765380859375	2	491.765843	981.517133	-0.79496	-0.00039093	-3.881	-0.0019085	-4.676	-0.0022995	491.7638392443188	49.097	1.1695	49.557	48.985	50.155	0.45983					77	28	5	0	0	0	0.49378	1	4802	4802		52.299	8.1824	1	5885400	+		53557	18453	35721	35736	60762	60762					0.02563553182983469
SFEKEKKY	8	Unmodified	_SFEKEKKY_					0	0	0		chr1:172211887-172253573|48|23.94|0.0|21.19|+|0|None,DNM3|2	chr1:172211887-172253573|48|23.94|0.0|21.19|+|0|None,DNM3|2	chr1:172211887-172253573|48|23.94|0.0|21.19|+|0|None,DNM3|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2838745117188	2	529.779482	1057.54441	-0.33938	-0.0001798	0.36118	0.00019135	0.0218	1.1549E-05	529.7795579963132	64.39	0.96629	64.417	63.833	64.799	0.027145					56	25	3	0	0	0	0.90523	1	6041	6041		40.778	1.5253	1	324740			53558	31	35722	35737	60763	60763					0.017940367233904908
SFELYGADFV	10	Unmodified	_SFELYGADFV_					0	0	0		ENSG00000138892|ENST00000433387|TTLL8;nc|ENSG00000138892|A6PVC2|TTLL8;ENST00000496526.5_1_3:9870593-9876502:+|nuORF;nc|ENSG00000214021|Q9Y4R7-6|TTLL3;ENST00000473661.5_1_3:9867594-9876502:+|nuORF;nc|ENSG00000214021|Q9Y4R7-2|TTLL3;ENST00000427220.5_1_3:9860474-9876502:+|nuORF;nc|ENSG00000214021|Q9Y4R7-5|TTLL3;nc|ENSG00000241553|P59998-2|ARPC4;nc|ENSG00000214021|Q9Y4R7|TTLL3;ENSG00000214021|ENST00000685419|TTLL3;nc|ENSG00000138892|A6PVC2-2|TTLL8	ENSG00000138892|ENST00000433387|TTLL8	ENSG00000138892|ENST00000433387|TTLL8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3193969726562	2	574.268947	1146.52334	0.59045	0.00033908	-3.6003	-0.0020675	-3.0098	-0.0017285	574.2668446038623	95.921	2.2132	96.152	94.569	96.782	0.23103					84	52	2	0	0	0	0.37624	1	9640	9640		44.117	6.9577	1	134210			53559	4342	35723	35738	60764	60764					-0.04405973376151451
SFESTGFSS	9	Unmodified	_SFESTGFSS_					0	0	0			REV__ENSG00000138336|ENST00000373644|TET1	REV__ENSG00000138336|ENST00000373644|TET1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.7828063964844	2	474.700897	947.387241	-0.71514	-0.00033948	-2.6564	-0.001261	-3.3715	-0.0016005	474.6995987298202	18.467	0.48249	17.845	17.676	18.159	-0.62141					14	10	2	0	0	0	0.20789	1	418	418		21.96	9.0007	1	84591	+		53560	19458	35724	35739	60765	60765					-0.08855667886780338
SFESTGFSS	9	Unmodified	_SFESTGFSS_					0	0	0			REV__ENSG00000138336|ENST00000373644|TET1	REV__ENSG00000138336|ENST00000373644|TET1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	474.700897	947.387241	0.85252	0.00040469	-4.2249	-0.0020056	-3.3724	-0.0016009	474.69886221139143	18.343	0.37248	17.867	17.657	18.03	-0.47694	0.010719	-0.00077212	NaN	21.96	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68236	+		53561	19458	35724	35739							-0.08855667886780338
SFFGGDKKR	9	Unmodified	_SFFGGDKKR_					0	0	0			REV__nc|ENSG00000179902|Q5T5A4-2|CFAP276	REV__nc|ENSG00000179902|Q5T5A4-2|CFAP276	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.27734375	2	521.277441	1040.54033	0.90467	0.00047159	-0.84326	-0.00043957	0.061414	3.2014E-05	521.2768455605345	37.247	0.65162	37.56	37.329	37.98	0.31312					37	15	3	0	0	0	0.69624	1	2973	2973		40.778	1.972	1	830420	+		53562	22363	35725	35740	60766	60766					0.02167992020326892
SFFICCPFI	9	Unmodified	_SFFICCPFI_					0	0	0		nc|ENSG00000176748|P0C646|OR52Z1P	nc|ENSG00000176748|P0C646|OR52Z1P	nc|ENSG00000176748|P0C646|OR52Z1P	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.7528686523438	2	538.750824	1075.4871	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.044	1	79.987	79.487	80.487	-0.056503								0	0	0	0.31088	1	8031	8031		26.796	2.5934	1				53563	15114	35726	35741	60767	60767					-0.047628450782212894
SFFILPLVL	9	Unmodified	_SFFILPLVL_					0	0	0			REV__ENST00000545387.6_1_19:49298344-49298500:-|nuORF	REV__ENST00000545387.6_1_19:49298344-49298500:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8267211914062	2	524.825704	1047.63685	0.8139	0.00042716	1.4579	0.00076513	2.2718	0.0011923	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.67235	1	10316	10316		42.474	6.8562	1	27719000	+		53564	28523	35727	35742	60768	60768					0.1149416652756372
SFFILVAM	8	Unmodified	_SFFILVAM_					0	0	0			REV__ENST00000562621.1_1_15:73044684-73048205:-|nuORF	REV__ENST00000562621.1_1_15:73044684-73048205:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25341796875	2	464.254057	926.493561	-1.1814	-0.00054845	1.1549	0.00053618	-0.026428	-1.2269E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.89457	1	8088	8088		37.028	1.4102	1	946850	+		53565	28803	35728	35743	60769	60769					0.027374161448278755
SFFILVAM	8	Unmodified	_SFFILVAM_					0	0	0			REV__ENST00000562621.1_1_15:73044684-73048205:-|nuORF	REV__ENST00000562621.1_1_15:73044684-73048205:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2537841796875	2	464.254057	926.493561	0.72749	0.00033774	-0.79154	-0.00036747	-0.064046	-2.9733E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.89457	2	8669	8669;8731		39.021	3.4032	1	1578600	+		53566	28803	35728	35743	60770;60771	60770					0.027374161448278755
SFFILVAM	8	Unmodified	_SFFILVAM_					0	0	0			REV__ENST00000562621.1_1_15:73044684-73048205:-|nuORF	REV__ENST00000562621.1_1_15:73044684-73048205:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.25372314453125	2	464.254057	926.493561	0.086658	4.0231E-05	-0.17606	-8.1738E-05	-0.089404	-4.1506E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.89457	1	8382	8382		37.028	3.5355	1	1673200	+		53567	28803	35728	35743	60772	60772					0.027374161448278755
SFFKADKVT	9	Unmodified	_SFFKADKVT_					0	0	0		nc|ENSG00000144895|Q9BY44-4|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;ENSG00000144895|ENST00000460851|EIF2A	nc|ENSG00000144895|Q9BY44-4|EIF2A	nc|ENSG00000144895|Q9BY44-4|EIF2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.781494140625	2	521.782025	1041.5495	-0.5065	-0.00026428	-0.14789	-7.7167E-05	-0.65439	-0.00034145	521.7818171549486	48.167	1.0744	48.636	48.119	49.194	0.46941					72	26	4	0	0	0	0.33718	2	4619	4619;4631		62.107	14.192	1	7594000			53568	4742	35729	35744	60773;60774	60773					0.030383405859765844
SFFLLLRFFLR	11	Unmodified	_SFFLLLRFFLR_					0	0	0		ENSG00000143155|ENST00000367833|TIPRL	ENSG00000143155|ENST00000367833|TIPRL	ENSG00000143155|ENST00000367833|TIPRL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.9580078125	3	486.958852	1457.85473	2.8344	0.0013802	-2.6992	-0.0013144	0.13519	6.5833E-05	486.95741374283875	102.92	1.3011	102.87	102.26	103.56	-0.046997					70	31	3	0	0	0	0.77511	1	11256	11256		16.53	0.6092	1	341730			53569	4605	35730	35745	60775	60775					0.1441135645002305
SFFLLLRFFLR	11	Unmodified	_SFFLLLRFFLR_					0	0	0		ENSG00000143155|ENST00000367833|TIPRL	ENSG00000143155|ENST00000367833|TIPRL	ENSG00000143155|ENST00000367833|TIPRL	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	486.958852	1457.85473	-0.79115	-0.00038526	1.3078	0.00063687	0.51669	0.00025161	487.2940422769576	103.01	0.98138	103.01	102.1	103.08	0	0.18865	0.0031462	NaN	16.53	47	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	457830			53570	4605	35730	35745							0.1441135645002305
SFFLLLRFFLR	11	Unmodified	_SFFLLLRFFLR_					0	0	0		ENSG00000143155|ENST00000367833|TIPRL	ENSG00000143155|ENST00000367833|TIPRL	ENSG00000143155|ENST00000367833|TIPRL	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	486.958852	1457.85473	0.79001	0.0003847	-0.37895	-0.00018453	0.41106	0.00020017	486.9584649603582	102.7	1.5035	102.83	102.01	103.52	0.12622	0.0028708	0.00068196	NaN	16.53	71	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	400810			53571	4605	35730	35745							0.1441135645002305
SFFLLLRFFLR	11	Unmodified	_SFFLLLRFFLR_					0	0	0		ENSG00000143155|ENST00000367833|TIPRL	ENSG00000143155|ENST00000367833|TIPRL	ENSG00000143155|ENST00000367833|TIPRL	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	486.958852	1457.85473	1.6258	0.00079171	-1.3814	-0.00067267	0.24445	0.00011904	486.9578948885506	102.43	0.76801	102.69	102.11	102.88	0.26322	-0.13112	-0.00078246	NaN	16.53	38	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	297380			53572	4605	35730	35745							0.1441135645002305
SFFQDEHVA	9	Unmodified	_SFFQDEHVA_					0	0	0		nc|ENSG00000288701|Q5JSZ5|PRRC2B	nc|ENSG00000288701|Q5JSZ5|PRRC2B	nc|ENSG00000288701|Q5JSZ5|PRRC2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.014404296875	2	540.243264	1078.47197	-0.36218	-0.00019567	-3.6892	-0.0019931	-4.0514	-0.0021887	540.2411699324455	20.657	0.26699	20.028	19.809	20.076	-0.6296					6	5	2	0	0	0	0.20789	1	682	682		34.173	3.6689	1	17652			53573	15335	35731	35746	60776	60776					-0.06412297350175322
SFGIMGKAS	9	Unmodified	_SFGIMGKAS_					0	0	0		nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1;ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2306823730469	2	449.228571	896.442588	0.59617	0.00026782	3.8501	0.0017296	4.4462	0.0019974	449.2302610410389	83.151	3.4859	83.298	82.027	85.513	0.14694					178	80	3	0	0	0	0.66686	1	8052	8052		42.864	2.2917	1	225870			53574	14953	35732	35747	60777	60777					-0.009775329000149213
SFGLVFLYH	9	Unmodified	_SFGLVFLYH_					0	0	0			REV__ENST00000480863.1_1_2:109111769-109112171:+|nuORF	REV__ENST00000480863.1_1_2:109111769-109112171:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.7850341796875	2	541.78711	1081.55967	-0.1772	-9.6005E-05	-3.1928	-0.0017298	-3.37	-0.0018258	541.7852873202811	56.84	2.4261	56.873	56.56	58.986	0.033184					182	81	4	0	0	0	0.77546	1	5280	5280		31.955	0.42505	1	6132200	+		53575	27426	35733	35748	60778	60778					0.022149483112571033
SFGPDPLL	8	Unmodified	_SFGPDPLL_					0	0	0		nc|ENSG00000284713|A0A286YFK9|SMIM38	nc|ENSG00000284713|A0A286YFK9|SMIM38	nc|ENSG00000284713|A0A286YFK9|SMIM38	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.54998779296875	2	423.223811	844.433069	0.53083	0.00022466	-0.73832	-0.00031247	-0.20749	-8.7815E-05	423.22399490533604	22.649	0.54316	22.038	21.71	22.253	-0.6107					15	12	2	0	0	0	0.4196	1	951	951		31.955	7.7521	1	36575			53576	15324	35734	35749	60779	60779					0.004630220860917689
SFGVGANKLI	10	Unmodified	_SFGVGANKLI_					0	0	0			REV__ENSG00000165185|ENST00000337530|KIAA1958	REV__ENSG00000165185|ENST00000337530|KIAA1958	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.2893371582031	2	503.290017	1004.56548	1.7384	0.00087494	1.4164	0.00071285	3.1548	0.0015878	503.29066537682445	109.62	1.4439	109.69	109.43	110.88	0.067932					122	60	3	0	0	0	0.77314	1	13279	13279		40.778	9.2484	1	1719700	+		53577	21159	35735	35750	60780	60780					0.06338046822895649
SFGVVLTL	8	Unmodified	_SFGVVLTL_					0	0	0		ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.1839294433594	2	418.249829	834.485105	-1.7934	-0.0007501	-1.7431	-0.00072905	-3.5365	-0.0014791	418.2488440010636	87.564	0.81387	87.766	87.371	88.185	0.20115					33	18	3	0	0	0	0.4196	1	8618	8618		7.6903	3.374	1	140300			53578	9078	35736	35751	60781	60781					0.06124185499857049
SFGVVLTL	8	Unmodified	_SFGVVLTL_					0	0	0		ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	418.249829	834.485105	-1.1842	-0.00049528	-5.1784	-0.0021658	-6.3625	-0.0026611	418.2470933861445	88.019	2.0798	88.019	86.386	88.465	0	0.10418	-0.0015164	NaN	7.6903	59	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99063			53579	9078	35736	35751							0.06124185499857049
SFGVVLTL	8	Unmodified	_SFGVVLTL_					0	0	0		ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	418.249829	834.485105	-0.18704	-7.8228E-05	-3.1771	-0.0013288	-3.3641	-0.001407	418.2483039663789	87.967	0.77897	88.035	87.573	88.352	0.067711	0.12049	0.00015765	NaN	7.6903	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	126460			53580	9078	35736	35751							0.06124185499857049
SFGVVLTL	8	Unmodified	_SFGVVLTL_					0	0	0		ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	418.249829	834.485105	1.0649	0.00044538	-5.0396	-0.0021078	-3.9747	-0.0016624	418.2474778074642	87.897	1.1229	87.823	87.076	88.199	-0.074005	-0.091068	-0.0014004	NaN	7.6903	46	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178660			53581	9078	35736	35751							0.06124185499857049
SFGVVLTL	8	Unmodified	_SFGVVLTL_					0	0	0		ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	418.249829	834.485105	0.96206	0.00040238	-5.1969	-0.0021736	-4.2348	-0.0017712	418.2472301597519	87.532	0.79323	87.978	87.599	88.392	0.44628	0.063348	-0.0015319	NaN	7.6903	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120010			53582	9078	35736	35751							0.06124185499857049
SFGWALEVY	9	Unmodified	_SFGWALEVY_					0	0	0			REV__ENST00000566056.1_1_16:30959736-30965162:+|nuORF	REV__ENST00000566056.1_1_16:30959736-30965162:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	536.2598876953125	2	536.260925	1070.5073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.99	1	64.995	64.495	65.495	0.0046997								0	0	0	0.28386	1	6095	6095		37.159	6.6555	1		+		53583	22093	35737	35752	60782	60782					-0.025136348223668392
SFGYKTLR	8	Unmodified	_SFGYKTLR_					0	0	0			REV__ENSG00000176979|ENST00000512596|TRIM60	REV__ENSG00000176979|ENST00000512596|TRIM60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.2672119140625	2	486.269084	970.523616	-1.6066	-0.00078124	-2.3049	-0.0011208	-3.9115	-0.0019021	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.88601	1	8351	8351		34.173	0.65696	1	1531500	+		53584	22167	35738	35753	60783	60783					0.03717491134386819
SFHDKCYQ	8	Unmodified	_SFHDKCYQ_					0	0	0			REV__ENSG00000148400|ENST00000651671|NOTCH1	REV__ENSG00000148400|ENST00000651671|NOTCH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.2203979492188	2	514.218734	1026.42292	0.011527	5.9272E-06	2.4167	0.0012427	2.4282	0.0012486	514.219877561838	29.927	1.1615	29.884	29.339	30.501	-0.043095					61	30	3	0	0	0	0.79403	1	1593	1593		63.306	0	1	394770	+		53585	20116	35739	35754	60784	60784					-0.08923908910810496
SFHRKKRIH	9	Unmodified	_SFHRKKRIH_					0	0	0			REV__ENSG00000162302|ENST00000334205|RPS6KA4	REV__ENSG00000162302|ENST00000334205|RPS6KA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.57464599609375	3	403.575624	1207.70504	-0.18746	-7.5654E-05	-1.6341	-0.00065948	-1.8216	-0.00073514	403.57480473047985	82.306	1.7649	82.372	81.231	82.996	0.065918					98	40	4	0	0	0	0.76764	1	8091	8091		41.427	9.7923	1	480930	+		53586	20803	35740	35755	60785	60785					0.10949848950804153
SFHRKKRIH	9	Unmodified	_SFHRKKRIH_					0	0	0			REV__ENSG00000162302|ENST00000334205|RPS6KA4	REV__ENSG00000162302|ENST00000334205|RPS6KA4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.23272705078125	3	403.575624	1207.70504	0.82175	0.00033164	-2.5439	-0.0010267	-1.7222	-0.00069503	403.57443762701166	84.285	1.6836	84.72	84.382	86.066	0.43538					93	41	3	0	0	0	0.20789	1	9866	9866		22.58	0	1	859640	+		53587	20803	35740	35755	60786	60786					0.10949848950804153
SFHRKKRIH	9	Unmodified	_SFHRKKRIH_					0	0	0			REV__ENSG00000162302|ENST00000334205|RPS6KA4	REV__ENSG00000162302|ENST00000334205|RPS6KA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747375488281	3	403.575624	1207.70504	-0.098768	-3.986E-05	-2.5291	-0.0010207	-2.6278	-0.0010605	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.76255	1	9502	9502		42.864	8.7778	1	16485000	+		53588	20803	35740	35755	60787	60787					0.10949848950804153
SFHRKKRIH	9	Unmodified	_SFHRKKRIH_					0	0	0			REV__ENSG00000162302|ENST00000334205|RPS6KA4	REV__ENSG00000162302|ENST00000334205|RPS6KA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8589477539062	2	604.859798	1207.70504	0.10436	6.3124E-05	-2.2427	-0.0013565	-2.1383	-0.0012934	604.8584167241106	82.662	2.6581	83.136	82.878	85.536	0.47383					100	64	2	0	0	0	0.58668	1	9667	9667		47.657	9.8458	1	1770100	+		53589	20803	35740	35755	60788	60788					0.10949848950804153
SFHSGALIGFA	11	Unmodified	_SFHSGALIGFA_					0	0	0			REV__nc|ENSG00000104635|Q15043-2|SLC39A14	REV__nc|ENSG00000104635|Q15043-2|SLC39A14	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8325805664062	2	553.785099	1105.55564	0.70544	0.00039066	-0.8841	-0.0004896	-0.17866	-9.8937E-05	553.7844568638237	84.183	0.51406	84.33	84.046	84.56	0.14793					22	11	3	0	0	0	0.17404	1	8147	8147		20.947	0	1	72412	+		53590	17465	35741	35756	60789	60789					0.007088588175520272
SFHTAGSLPPT	11	Unmodified	_SFHTAGSLPPT_					0	0	0		nc|ENSG00000129422|Q9ULD2-5|MTUS1;ENST00000523718.5_1_8:17581004-17613316:-|nuORF;nc|ENSG00000129422|Q9ULD2-2|MTUS1;ENSG00000129422|ENST00000693296|MTUS1	nc|ENSG00000129422|Q9ULD2-5|MTUS1	nc|ENSG00000129422|Q9ULD2-5|MTUS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.7783813476562	2	557.780013	1113.54547	0.13503	7.532E-05	-3.4263	-0.0019111	-3.2913	-0.0018358	557.7777996045423	25.431	0.4968	25.39	25.152	25.649	-0.04117					29	14	3	0	0	0	0.7342	1	1080	1080		25.574	0.12388	1	71075			53591	3587	35742	35757	60790	60790					-0.006757489077244827
SFHVTLLD	8	Unmodified	_SFHVTLLD_					0	0	0		ENSG00000142619|ENST00000375460|PADI3	ENSG00000142619|ENST00000375460|PADI3	ENSG00000142619|ENST00000375460|PADI3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.23590087890625	2	466.247818	930.481082	-0.24224	-0.00011294	0.4755	0.0002217	0.23326	0.00010876	466.24800521101633	55.085	0.7948	55.653	55.362	56.157	0.56836					29	18	2	0	0	0	0.4196	1	5715	5715		18.324	0	1	472970			53592	4575	35743	35758	60791	60791					0.013060960061579863
SFIKRKVISLK	11	Unmodified	_SFIKRKVISLK_					0	0	0		ENSG00000176567|ENST00000320048|OR4X1	ENSG00000176567|ENST00000320048|OR4X1	ENSG00000176567|ENST00000320048|OR4X1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.62646484375	3	440.29049	1317.84964	0.36311	0.00015988	3.9032	0.0017185	4.2663	0.0018784	440.2919928155031	58.022	1.2392	58.056	57.534	58.773	0.033905					105	37	4	0	0	0	0.81219	1	5302	5302		8.7993	1.7806	1	302530			53593	7088	35744	35759	60792	60792					0.20343052587395505
SFIKWLEL	8	Unmodified	_SFIKWLEL_					0	0	0			REV__ENSG00000181903|ENST00000314259|OR4C6	REV__ENSG00000181903|ENST00000314259|OR4C6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2950439453125	2	518.29731	1034.58007	-0.11564	-5.9936E-05	-3.6356	-0.0018843	-3.7512	-0.0019443	518.29533424128	76.942	0.87077	77.51	77.308	78.179	0.56836					47	21	3	0	0	0	0.91982	1	8804	8804		45.972	5.1941	1	1071400	+		53594	22487	35745	35760	60793	60793					0.06416118971037577
SFILAVLI	8	Unmodified	_SFILAVLI_					0	0	0			REV__nc|ENSG00000180287|Q8N7P1-4|PLD5	REV__nc|ENSG00000180287|Q8N7P1-4|PLD5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2615051269531	2	438.283672	874.552791	-2.5566	-0.0011205	0.73358	0.00032152	-1.8231	-0.00079902	438.284455717549	40.984	0.35549	41.376	41.165	41.521	0.39209					15	9	2	0	0	0	0.4196	1	3517	3517		8.8223	0	1	947510	+		53595	22387	35746	35761	60794	60794					0.1104963543065196
SFILDIRIV	9	Unmodified	_SFILDIRIV_					0	0	0			REV__ENST00000475809.1_1_13:111552980-111553058:-|nuORF	REV__ENST00000475809.1_1_13:111552980-111553058:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3267211914062	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12526	12526		20.947	2.6225	1	4041000	+		53596	27324	35747	35762	60795	60795					0.1093947940810267
SFILIHQN	8	Unmodified	_SFILIHQN_					0	0	0			REV__ENSG00000004799|ENST00000005178|PDK4	REV__ENSG00000004799|ENST00000005178|PDK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.2669982910156	2	486.269084	970.523616	-0.72647	-0.00035326	-3.2279	-0.0015696	-3.9543	-0.0019229	486.2674012957117	86.085	5.1254	86.27	85.016	90.141	0.18522					327	120	4	0	0	0	0.87922	1	8562	8562		31.955	2.8053	1	1830000	+		53597	16063	35748	35763	60796	60796					0.037174911343640815
SFISTAIT	8	Unmodified	_SFISTAIT_					0	0	0			REV__ENSG00000135749|ENST00000258229|PCNX2	REV__ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2271728515625	2	420.229094	838.443634	0.53933	0.00022664	-3.4769	-0.0014611	-2.9375	-0.0012344	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.86791	1	7684	7684		28.254	0	1	678130	+		53598	19245	35749	35764	60797	60797					0.017950047405179248
SFKEKVRARG	10	Unmodified	_SFKEKVRARG_					0	0	0			REV__nc|ENSG00000119523|Q9H553-2|ALG2	REV__nc|ENSG00000119523|Q9H553-2|ALG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.343505859375	2	589.343646	1176.67274	0.83312	0.00049099	-2.1148	-0.0012464	-1.2817	-0.00075536	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.86047	1	10127	10127		23.523	1.5628	1	20363000	+		53599	18356	35750	35765	60798	60798					0.09147016757128767
SFKKAKAKDLF	11	Unmodified	_SFKKAKAKDLF_					0	0	0			REV__ENSG00000134697|ENST00000373062|GNL2	REV__ENSG00000134697|ENST00000373062|GNL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.884521484375	2	641.87953	1281.74451	1.6823	0.0010798	2.8836	0.0018509	4.5658	0.0029307	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.72918	1	10591	10591		26.693	1.1189	1	3772700	+		53600	19158	35751	35766	60799	60799					0.11490511390957181
SFKNKLYEQH	10	Unmodified	_SFKNKLYEQH_					0	0	0		ENSG00000264424|ENST00000255381|MYH4;ENSG00000109061|ENST00000226207|MYH1	ENSG00000264424|ENST00000255381|MYH4;ENSG00000109061|ENST00000226207|MYH1	ENSG00000264424|ENST00000255381|MYH4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	431.3047790527344	3	431.891055	1292.65134	-0.173	-7.4718E-05	-1.1847	-0.00051164	-1.3577	-0.00058636	432.2236273770084	76.797	0.7758	76.846	76.118	76.893	0.049194					33	26	2	0	0	0	0.37624	1	7434	7434		14.694	0	1	29418			53601	8943;2445	35752	35767	60800	60800					0.016715869377549097
SFKNKLYEQH	10	Unmodified	_SFKNKLYEQH_					0	0	0		ENSG00000264424|ENST00000255381|MYH4;ENSG00000109061|ENST00000226207|MYH1	ENSG00000264424|ENST00000255381|MYH4;ENSG00000109061|ENST00000226207|MYH1	ENSG00000264424|ENST00000255381|MYH4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	431.3050842285156	3	431.891055	1292.65134	0.33891	0.00014637	-2.6744	-0.0011551	-2.3355	-0.0010087	432.22307857627226	81.303	1.8407	81.243	80.666	82.506	-0.059692					59	42	2	0	0	0	0.37624	1	8332	8332		24.232	3.1996	1	41426			53602	8943;2445	35752	35767	60801	60801					0.016715869377549097
SFKNKLYEQH	10	Unmodified	_SFKNKLYEQH_					0	0	0		ENSG00000264424|ENST00000255381|MYH4;ENSG00000109061|ENST00000226207|MYH1	ENSG00000264424|ENST00000255381|MYH4;ENSG00000109061|ENST00000226207|MYH1	ENSG00000264424|ENST00000255381|MYH4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	431.30511474609375	3	431.891055	1292.65134	1.938	0.00083702	-4.3499	-0.0018787	-2.4118	-0.0010416	432.2223695790196	81.466	1.9552	81.523	80.602	82.557	0.057816					60	44	2	0	0	0	0.37624	1	8199	8199		30.569	0	1	84804			53603	8943;2445	35752	35767	60802	60802					0.016715869377549097
SFKNKLYEQH	10	Unmodified	_SFKNKLYEQH_					0	0	0		ENSG00000264424|ENST00000255381|MYH4;ENSG00000109061|ENST00000226207|MYH1	ENSG00000264424|ENST00000255381|MYH4;ENSG00000109061|ENST00000226207|MYH1	ENSG00000264424|ENST00000255381|MYH4	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	431.891055	1292.65134	-1.2808	-0.00055318	-1.4309	-0.00061799	-2.7117	-0.0011712	432.22358854600094	81.295	1.1073	81.295	80.597	81.704	0	-0.058632	0.0019527	NaN	24.232	44	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29717			53604	8943;2445	35752	35767							0.016715869377549097
SFKPTTRPV	9	Unmodified	_SFKPTTRPV_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7928466796875	2	516.795466	1031.57638	-0.87095	-0.0004501	-3.3844	-0.001749	-4.2553	-0.0021991	516.7937641781077	86.407	2.8089	86.407	84.831	87.64	0					132	64	4	0	0	0	0.76764	1	8380	8380		34.173	5.023	1	210980	+		53605	22442	35753	35768	60803	60803					0.06185449197187154
SFKSEKTN	8	Unmodified	_SFKSEKTN_					0	0	0		ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000197136|Q9H6A9-2|PCNX3	ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000197136|Q9H6A9-2|PCNX3	ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7406005859375	2	470.740357	939.46616	-0.32373	-0.00015239	0.42825	0.00020159	0.10451	4.9199E-05	470.74039112999986	18.506	0.50007	18.429	18.182	18.682	-0.07671					24	12	3	0	0	0	0.88185	1	300	300		32.812	1.2826	1	212300			53606	8138;15189	35754	35769	60804	60804					-0.0059939586186601446
SFKYAEYFLRP	11	Unmodified	_SFKYAEYFLRP_					0	0	0		nc|ENSG00000065150|O00410-2|IPO5;ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-3|IPO5	nc|ENSG00000065150|O00410-2|IPO5	nc|ENSG00000065150|O00410-2|IPO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.2470397949219	3	474.246839	1419.71869	-0.39291	-0.00018633	2.5138	0.0011921	2.1209	0.0010058	474.24798345812246	17.835	0.46739	17.756	17.602	18.07	-0.078943					56	19	4	0	0	0	0.71394	1	260	260		29.245	5.8671	1	288830			53607	1121	35755	35770	60805	60805					0.02561617148694495
SFLAFLLF	8	Unmodified	_SFLAFLLF_					0	0	0			REV__ENSG00000176230|ENST00000641386|OR4K17	REV__ENSG00000176230|ENST00000641386|OR4K17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2776794433594	2	479.275847	956.537141	2.2671	0.0010866	1.6123	0.00077275	3.8795	0.0018593	479.2765493533754	97.406	1.666	97.351	96.889	98.555	-0.055542					99	38	4	0	0	0	0.88915	1	10471	10471		35.201	0	1	975730	+		53608	22117	35756	35771	60806	60806					0.05713348913604932
SFLGSNKTL	9	Unmodified	_SFLGSNKTL_					0	0	0			REV__ENST00000569124.1_1_15:75146292-75165273:-|nuORF	REV__ENST00000569124.1_1_15:75146292-75165273:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.766845703125	2	483.766374	965.518196	0.97423	0.0004713	-1.1379	-0.0005505	-0.16371	-7.9197E-05	483.7657260263806	36.398	1.8576	36.839	36.573	38.431	0.44043					114	45	4	0	0	0	0.15959	1	2963	2963		82.241	2.5279	1	2927300	+		53609	28827	35757	35772	60807	60807					0.03405767551907957
SFLIVLVNK	9	Unmodified	_SFLIVLVNK_					0	0	0		ENST00000482643.1_1_9:99136327-99145916:-|nuORF;nc|ENSG00000130958|Q76EJ3-2|SLC35D2;ENSG00000130958|ENST00000253270|SLC35D2	ENST00000482643.1_1_9:99136327-99145916:-|nuORF	ENST00000482643.1_1_9:99136327-99145916:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	517.327880859375	2	516.826235	1031.63792	-0.046472	-2.4018E-05	-1.62	-0.00083724	-1.6664	-0.00086125	517.3267654803483	108.96	0.7654	108.91	108.37	109.14	-0.049324					56	31	2	0	0	0	0.7932	1	11880	11880		17.365	1.7232	1	1190900			53610	3703	35758	35773	60808	60808					0.12336380896431365
SFLKESTI	8	Unmodified	_SFLKESTI_					0	0	0			REV__ENSG00000108239|ENST00000225235|TBC1D12	REV__ENSG00000108239|ENST00000225235|TBC1D12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	462.7544860839844	2	462.755475	923.496398	-1.2903	-0.00059709	1.7107	0.00079162	0.42039	0.00019454	462.7558998239798	75.355	0.53687	75.442	75.272	75.808	0.087631					17	13	2	0	0	0	0.87064	1	7001	7001		29.15	0.89528	1	80617	+		53611	17700	35759	35774	60809	60809					0.03158962803343002
SFLKKCLSEPK	11	Unmodified	_SFLKKCLSEPK_					0	0	0			REV__nc|ENSG00000236320|P0C7P3-2|SLFN14	REV__nc|ENSG00000236320|P0C7P3-2|SLFN14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.361083984375	2	640.357573	1278.70059	-0.067952	-4.3514E-05	2.0877	0.0013369	2.0198	0.0012934	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.72106	1	10672	10672		28.081	2.5074	1	640120	+		53612	23789	35760	35775	60810	60810					0.07239158902348208
SFLKKNKKKE	10	Unmodified	_SFLKKNKKKE_					0	0	0		nc|ENSG00000148700|Q9UEY8-2|ADD3;ENSG00000148700|ENST00000356080|ADD3	nc|ENSG00000148700|Q9UEY8-2|ADD3	nc|ENSG00000148700|Q9UEY8-2|ADD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.5919189453125	3	417.259079	1248.75541	-0.4052	-0.00016908	-1.2712	-0.00053044	-1.6764	-0.00069951	417.25848575435583	15.901	0.25422	15.821	15.726	15.98	-0.080017					19	11	3	0	0	0	0.85259	1	59	59		20.03	0.7678	1	113160			53613	4978	35761	35776	60811	60811					0.1409791376524936
SFLKRKISVF	10	Unmodified	_SFLKRKISVF_					0	0	0		ENST00000552562.1_2_12:54652061-54652136:-|nuORF	ENST00000552562.1_2_12:54652061-54652136:-|nuORF	ENST00000552562.1_2_12:54652061-54652136:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.9222106933594	3	408.920286	1223.73903	2.7179	0.0011114	2.0537	0.00083978	4.7716	0.0019512	408.92110256360985	104.72	4.0561	104.68	103.08	107.14	-0.04039					239	96	4	0	0	0	0.86272	1	11574	11574		23.378	8.6842	1	3838400			53614	13683	35762	35777	60812	60812					0.13610832599169953
SFLKRKISVF	10	Unmodified	_SFLKRKISVF_					0	0	0		ENST00000552562.1_2_12:54652061-54652136:-|nuORF	ENST00000552562.1_2_12:54652061-54652136:-|nuORF	ENST00000552562.1_2_12:54652061-54652136:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.922119140625	3	408.920286	1223.73903	3.1807	0.0013007	1.6839	0.00068856	4.8646	0.0019892	408.92095568616344	104.57	4.1233	104.61	103.07	107.19	0.039856					288	98	5	0	0	0	0.85466	1	11443	11443		14.694	0.96415	1	4230400			53615	13683	35762	35777	60813	60813					0.13610832599169953
SFLKRKISVF	10	Unmodified	_SFLKRKISVF_					0	0	0		ENST00000552562.1_2_12:54652061-54652136:-|nuORF	ENST00000552562.1_2_12:54652061-54652136:-|nuORF	ENST00000552562.1_2_12:54652061-54652136:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.92205810546875	3	408.920286	1223.73903	0.73412	0.0003002	4.0803	0.0016685	4.8145	0.0019687	408.92190975649805	104.5	3.3645	104.62	103.39	106.76	0.11684					226	83	5	0	0	0	0.85694	2	11130	11130;11154		23.378	1.6922	1	4256600			53616	13683	35762	35777	60814;60815	60814					0.13610832599169953
SFLLLFRFLNR	11	Unmodified	_SFLLLFRFLNR_					0	0	0			REV__nc|ENSG00000166377|O43861-2|ATP9B	REV__nc|ENSG00000166377|O43861-2|ATP9B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.2236633300781	3	475.950357	1424.82924	0.75761	0.00036059	1.7877	0.00085084	2.5453	0.0012114	475.9523508169612	26.972	0.17709	26.632	26.504	26.681	-0.34035					5	3	2	0	0	0	0.17911	1	1515	1515		13.508	4.7086	1	40197	+		53617	21286	35763	35778	60816	60816					0.1338188192760299
SFLLQTRRPIL	11	Unmodified	_SFLLQTRRPIL_					0	0	0		ENST00000371870.3_1_1:47799617-47838812:+|nuORF;ENSG00000162368|ENST00000371873|CMPK1	ENST00000371870.3_1_1:47799617-47838812:+|nuORF	ENST00000371870.3_1_1:47799617-47838812:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6092224121094	3	448.610111	1342.8085	-1.3621	-0.00061104	-0.21826	-9.7912E-05	-1.5803	-0.00070895	448.6097970890054	75.668	1.3969	75.668	74.988	76.385	0					143	49	4	0	0	0	0.74022	1	6847	6847		24.232	1.6702	1	388770			53618	5680	35764	35779	60817	60817					0.15081291547926412
SFLLQTRRPIL	11	Unmodified	_SFLLQTRRPIL_					0	0	0		ENST00000371870.3_1_1:47799617-47838812:+|nuORF;ENSG00000162368|ENST00000371873|CMPK1	ENST00000371870.3_1_1:47799617-47838812:+|nuORF	ENST00000371870.3_1_1:47799617-47838812:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.60906982421875	3	448.610111	1342.8085	0.53519	0.00024009	-2.1435	-0.00096159	-1.6083	-0.0007215	448.6089733377508	76.693	0.99095	76.828	76.468	77.459	0.13478					122	48	3	0	0	0	0.76251	1	7190	7190		19.263	3.9296	1	670390			53619	5680	35764	35779	60818	60818					0.15081291547926412
SFLLTTAS	8	Unmodified	_SFLLTTAS_					0	0	0		ENST00000311350.7_1_7:35734046-35734675:-|nuORF;ENST00000603731.1_2_7:35734046-35735162:-|nuORF;ENST00000396081.5_1_7:35734046-35734373:-|nuORF	ENST00000311350.7_1_7:35734046-35734675:-|nuORF	ENST00000311350.7_1_7:35734046-35734675:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2275085449219	2	420.229094	838.443634	0.089833	3.775E-05	-2.9174	-0.001226	-2.8276	-0.0011882	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.88915	2	7810	7810;7843		52.299	2.2746	1	888480			53620	9927	35765	35780	60819;60820	60819					0.017950047405292935
SFLLTTAS	8	Unmodified	_SFLLTTAS_					0	0	0		ENST00000311350.7_1_7:35734046-35734675:-|nuORF;ENST00000603731.1_2_7:35734046-35735162:-|nuORF;ENST00000396081.5_1_7:35734046-35734373:-|nuORF	ENST00000311350.7_1_7:35734046-35734675:-|nuORF	ENST00000311350.7_1_7:35734046-35734675:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2275695800781	2	420.229094	838.443634	-1.7925	-0.00075327	-1.0357	-0.00043521	-2.8282	-0.0011885	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.87922	1	7574	7574		31.955	3.7006	1	831720			53621	9927	35765	35780	60821	60821					0.017950047405292935
SFLLTTAS	8	Unmodified	_SFLLTTAS_					0	0	0		ENST00000311350.7_1_7:35734046-35734675:-|nuORF;ENST00000603731.1_2_7:35734046-35735162:-|nuORF;ENST00000396081.5_1_7:35734046-35734373:-|nuORF	ENST00000311350.7_1_7:35734046-35734675:-|nuORF	ENST00000311350.7_1_7:35734046-35734675:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2273864746094	2	420.229094	838.443634	0.53933	0.00022664	-3.4769	-0.0014611	-2.9375	-0.0012344	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.87922	1	7414	7414		31.955	4.0726	1	678130			53622	9927	35765	35780	60822	60822					0.017950047405292935
SFLLTTAS	8	Unmodified	_SFLLTTAS_					0	0	0		ENST00000311350.7_1_7:35734046-35734675:-|nuORF;ENST00000603731.1_2_7:35734046-35735162:-|nuORF;ENST00000396081.5_1_7:35734046-35734373:-|nuORF	ENST00000311350.7_1_7:35734046-35734675:-|nuORF	ENST00000311350.7_1_7:35734046-35734675:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.22784423828125	2	420.229094	838.443634	0.042435	1.7832E-05	-3.1023	-0.0013037	-3.0599	-0.0012859	420.2277069932212	78.969	5.8282	79.518	76.332	82.16	0.54945					273	145	3	0	0	0	0.91005	1	9128	9128		42.474	7.2737	1	581780			53623	9927	35765	35780	60823	60823					0.017950047405292935
SFLRLLKKF	9	Unmodified	_SFLRLLKKF_					0	0	0			REV__ENSG00000078295|ENST00000338316|ADCY2	REV__ENSG00000078295|ENST00000338316|ADCY2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3692016601562	2	576.368601	1150.72265	-0.74314	-0.00042832	2.2532	0.0012986	1.51	0.00087033	576.3696767962949	37.867	1.5412	38.18	37.746	39.287	0.31312					100	38	4	0	0	0	0.7932	1	3047	3047		23.042	2.0956	1	2629900	+		53624	16762	35766	35781	60824	60824					0.15331751433086538
SFLRLLKKF	9	Unmodified	_SFLRLLKKF_					0	0	0			REV__ENSG00000078295|ENST00000338316|ADCY2	REV__ENSG00000078295|ENST00000338316|ADCY2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3695068359375	2	576.368601	1150.72265	-0.38703	-0.00022307	1.819	0.0010484	1.432	0.00082536	576.369487649421	37.688	1.7157	38.174	37.83	39.546	0.48581					111	42	4	0	0	0	0.7932	1	3101	3101		21.96	1.013	1	1850300	+		53625	16762	35766	35781	60825	60825					0.15331751433086538
SFLVEPDIY	9	Unmodified	_SFLVEPDIY_					0	0	0		ENST00000366663.9_1_1:230975176-230975578:-|nuORF	ENST00000366663.9_1_1:230975176-230975578:-|nuORF	ENST00000366663.9_1_1:230975176-230975578:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7708740234375	2	541.773865	1081.53318	0.56599	0.00030664	-3.9063	-0.0021164	-3.3403	-0.0018097	541.7715234600436	27.619	0.49352	27.58	27.434	27.928	-0.038525					25	11	4	0	0	0	0.31972	1	1340	1340		63.306	13.282	1	54747			53626	10515	35767	35782	60826	60826					-0.004327853707536633
SFLVEPDIY	9	Unmodified	_SFLVEPDIY_					0	0	0		ENST00000366663.9_1_1:230975176-230975578:-|nuORF	ENST00000366663.9_1_1:230975176-230975578:-|nuORF	ENST00000366663.9_1_1:230975176-230975578:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	541.773865	1081.53318	0.8377	0.00045385	-4.635	-0.0025111	-3.7973	-0.0020573	541.771205607692	27.847	0.64547	27.824	27.422	28.067	-0.023556	0.11467	-0.00044407	NaN	63.306	29	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49361			53627	10515	35767	35782							-0.004327853707536633
SFLVRPKRRSR	11	Unmodified	_SFLVRPKRRSR_					0	0	0			REV__ENSG00000119919|ENST00000344586|NKX2-3	REV__ENSG00000119919|ENST00000344586|NKX2-3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2449951171875	3	467.956505	1400.84768	0.7712	0.00036089	2.8795	0.0013475	3.6507	0.0017084	467.9577428562268	105.78	0.50188	105.88	105.68	106.19	0.099007					18	12	2	0	0	0	0.18131	1	11300	11300		1.1482	0	1	98444	+		53628	18386	35768	35783	60827	60827					0.16329436622163485
SFLWWMWR	8	Unmodified	_SFLWWMWR_					0	0	0			REV__ENST00000554493.1_1_14:68129224-68156947:-|nuORF	REV__ENST00000554493.1_1_14:68129224-68156947:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	607.2838134765625	2	606.294579	1210.57461	-0.34198	-0.00020734	1.7038	0.001033	1.3618	0.00082563	606.2955969403031	33.592	0.35431	33.595	33.39	33.744	0.0030823					11	8	2	0	0	0	0.4196	1	1958	1958		25.45	4.613	1	35560	+		53629	16635	35769	35784	60828	60828					-0.02225883092432923
SFNIWSVARSL	11	Unmodified	_SFNIWSVARSL_					0	0	0			REV__nc|ENSG00000135540|Q5SYE7|NHSL1;REV__ENST00000534376.1_1_6:138892799-138893132:-|nuORF	REV__nc|ENSG00000135540|Q5SYE7|NHSL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3465576171875	2	640.343312	1278.67207	1.7548	0.0011237	3.3601	0.0021516	5.1149	0.0032753	640.3452591668301	102.79	0.81303	103.02	102.65	103.47	0.22556					88	25	4	0	0	0	0.43778	1	12492	12492		56.434	6.8977	1	14025000	+		53630	29866;28367	35770	35785	60829	60829					0.04388177317400732
SFNIWSVARSL	11	Unmodified	_SFNIWSVARSL_					0	0	0			REV__nc|ENSG00000135540|Q5SYE7|NHSL1;REV__ENST00000534376.1_1_6:138892799-138893132:-|nuORF	REV__nc|ENSG00000135540|Q5SYE7|NHSL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3463745117188	2	640.343312	1278.67207	4.3956	0.0028147	0.90819	0.00058155	5.3038	0.0033963	640.343646089099	102.73	0.67924	103.03	102.81	103.49	0.29865					86	22	4	0	0	0	0.48313	1	12582	12582		53.089	0.15226	1	12674000	+		53631	29866;28367	35770	35785	60830	60830					0.04388177317400732
SFNKAAPIKG	10	Unmodified	_SFNKAAPIKG_					0	0	0		nc|ENSG00000162849|Q2KJY2-2|KIF26B;chr1:245511128-245540767|14|19.0|0.13|7.16|+|ENST00000366518|KIF26B,KIF26B;ENSG00000162849|ENST00000407071|KIF26B	nc|ENSG00000162849|Q2KJY2-2|KIF26B	nc|ENSG00000162849|Q2KJY2-2|KIF26B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7938232421875	2	516.795466	1031.57638	-1.5587	-0.00080555	-2.3442	-0.0012115	-3.9029	-0.002017	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.86587	1	8668	8668		29.17	3.596	1	755180			53632	46	35771	35786	60831	60831					0.06185449197187154
SFNVPKIPSA	10	Unmodified	_SFNVPKIPSA_					0	0	0			REV__ENST00000398022.6_1_20:30754611-30754836:+|nuORF	REV__ENST00000398022.6_1_20:30754611-30754836:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2930908203125	2	530.295299	1058.57605	-0.034361	-1.8221E-05	-3.4792	-0.001845	-3.5136	-0.0018632	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.80179	1	9209	9209		39.253	2.0937	1	1852900	+		53633	26189	35772	35787	60832	60832					0.049100294773325004
SFPDKLRRVLL	11	Unmodified	_SFPDKLRRVLL_					0	0	0		nc|ENSG00000095383|Q9BYX2-6|TBC1D2;nc|ENSG00000095383|Q9BYX2-5|TBC1D2;nc|ENSG00000095383|Q9BYX2-4|TBC1D2;nc|ENSG00000095383|Q9BYX2-3|TBC1D2;nc|ENSG00000095383|Q9BYX2-2|TBC1D2;ENSG00000095383|ENST00000465784|TBC1D2	nc|ENSG00000095383|Q9BYX2-6|TBC1D2	nc|ENSG00000095383|Q9BYX2-6|TBC1D2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.9429016113281	3	448.610111	1342.8085	-0.12449	-5.5849E-05	-1.5935	-0.00071488	-1.718	-0.00077073	448.94365307156517	77.124	0.95989	77.076	76.709	77.669	-0.048264					104	45	3	0	0	0	0.78683	1	7658	7658		14.086	0.57807	1	533170			53634	1725	35773	35788	60833	60833					0.15081291547926412
SFPEKELLL	9	Unmodified	_SFPEKELLL_					0	0	0		nc|ENSG00000145041|Q9Y4B6-3|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;ENSG00000145041|ENST00000684031|DCAF1	nc|ENSG00000145041|Q9Y4B6-3|DCAF1	nc|ENSG00000145041|Q9Y4B6-3|DCAF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.9229125976562	2	538.305332	1074.59611	0.3841	0.00020676	3.0285	0.0016302	3.4126	0.001837	538.3068151207707	19.238	0.54965	18.768	18.563	19.113	-0.46967					16	11	2	0	0	0	0.20789	1	500	500		9.7057	0	1	89381			53635	4746	35774	35789	60834	60834					0.06179780417301117
SFPSRPRRPSG	11	Unmodified	_SFPSRPRRPSG_					0	0	0			REV__ENST00000512888.1_1_4:1165538-1166604:-|nuORF	REV__ENST00000512888.1_1_4:1165538-1166604:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.335693359375	2	622.336353	1242.65815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.85	1	110.88	110.38	111.38	0.031738								0	0	0	0.56276	1	12144	12144		5.5578	0	1		+		53636	27984	35775	35790	60835	60835					0.04652944608983489
SFQEFSKET	9	Unmodified	_SFQEFSKET_					0	0	0			REV__nc|ENSG00000139144|O75747-2|PIK3C2G	REV__nc|ENSG00000139144|O75747-2|PIK3C2G	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.7598876953125	2	551.756204	1101.49785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.231	1	20.602	20.102	21.102	-0.62835								0	0	0	0.31117	1	753	753		26.693	0	1		+		53637	15527	35776	35791	60836	60836					-0.0488344789855546
SFQSFAKGCRE	11	Unmodified	_SFQSFAKGCRE_					0	0	0			REV__ENSG00000124459|ENST00000269973|ZNF45	REV__ENSG00000124459|ENST00000269973|ZNF45	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.293701171875	2	630.295504	1258.57646	0.64029	0.00040357	1.7724	0.0011171	2.4127	0.0015207	630.2965544942194	23.374	0.99222	23.435	23.057	24.05	0.060431					84	35	3	0	0	0	0.71207	1	819	819		29.551	2.5034	1	334210	+		53638	18585	35777	35792	60837	60837					-0.04248918865118867
SFRFAKKV	8	Unmodified	_SFRFAKKV_					0	0	0			REV__nc|ENSG00000236438|C9JC47|FAM157A;REV__nc|ENSG00000260528|P0CG43|FAM157C	REV__nc|ENSG00000236438|C9JC47|FAM157A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7984924316406	2	491.795269	981.575986	-0.46236	-0.00022739	1.5136	0.00074436	1.0512	0.00051697	491.7961437087858	67.192	1.3864	67.156	66.452	67.839	-0.035698					84	59	2	0	0	0	0.81548	1	6440	6440		20.482	0	1	58996	+		53639	30226;30249	35778	35793	60838	60838					0.08446074267988024
SFRHLILP	8	Unmodified	_SFRHLILP_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7954406738281	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.894	1	67.915	67.415	68.415	0.021599								0	0	0	0.29755	1	6391	6391		24.203	2.5004	1				53640	4683	35779	35794	60839	60839					0.08446074267999393
SFRHLILP	8	Unmodified	_SFRHLILP_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79559326171875	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.81548	1	3549	3549		20.482	1.1219	1	2747400			53641	4683	35779	35794	60840	60840					0.08446074267999393
SFRHLILP	8	Unmodified	_SFRHLILP_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957763671875	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.85277	2	4641	4566;4641		31.955	4.0726	1	1759500			53642	4683	35779	35794	60841;60842	60842					0.08446074267999393
SFRHLILP	8	Unmodified	_SFRHLILP_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79547119140625	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.81548	1	4487	4487		20.482	2.1574	1	748320			53643	4683	35779	35794	60843	60843					0.08446074267999393
SFRKKFGL	8	Unmodified	_SFRKKFGL_					0	0	0			REV__ENST00000467284.1_1_3:194318022-194331704:-|nuORF	REV__ENST00000467284.1_1_3:194318022-194331704:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79534912109375	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.87064	1	4316	4316		29.15	4.9468	1	781720	+		53644	27153	35780	35795	60844	60844					0.08446074267999393
SFRKKFGL	8	Unmodified	_SFRKKFGL_					0	0	0			REV__ENST00000467284.1_1_3:194318022-194331704:-|nuORF	REV__ENST00000467284.1_1_3:194318022-194331704:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79522705078125	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.64	1	59.64	59.14	60.14	0								0	0	0	0.29816	1	5196	5196		38.806	6.8513	1		+		53645	27153	35780	35795	60845	60845					0.08446074267999393
SFRKKFGL	8	Unmodified	_SFRKKFGL_					0	0	0			REV__ENST00000467284.1_1_3:194318022-194331704:-|nuORF	REV__ENST00000467284.1_1_3:194318022-194331704:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7953186035156	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.85277	1	4535	4535		25.45	0	1	1898900	+		53646	27153	35780	35795	60846	60846					0.08446074267999393
SFRKLGKF	8	Unmodified	_SFRKLGKF_					0	0	0			REV__nc|ENSG00000163939|Q86U86-7|PBRM1	REV__nc|ENSG00000163939|Q86U86-7|PBRM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956237792969	2	491.795269	981.575986	-0.70573	-0.00034708	1.5523	0.0007634	0.84654	0.00041632	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.8347	1	4244	4244		23.042	2.5607	1	772710	+		53647	21000	35781	35796	60847	60847					0.08446074267988024
SFRKLGKF	8	Unmodified	_SFRKLGKF_					0	0	0			REV__nc|ENSG00000163939|Q86U86-7|PBRM1	REV__nc|ENSG00000163939|Q86U86-7|PBRM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7950439453125	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.87479	1	4506	4506		30.504	0	1	1759500	+		53648	21000	35781	35796	60848	60848					0.08446074267988024
SFRRRGRRS	9	Unmodified	_SFRRRGRRS_					0	0	0		ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3438720703125	2	589.342304	1176.67005	1.3218	0.00077898	0.16609	9.7882E-05	1.4879	0.00087686	589.3422903600197	104.56	1.3297	104.75	103.97	105.3	0.18887					70	33	4	0	0	0	0.70638	1	12754	12754		40.058	7.2458	1	471390			53649	7264	35782	35797	60849	60849					0.088786061428209
SFRRRGRRS	9	Unmodified	_SFRRRGRRS_					0	0	0		ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	589.342304	1176.67005	-0.24736	-0.00014578	1.7481	0.0010302	1.5007	0.00088445	589.3432535191548	105.17	1.1879	105.17	104.66	105.85	0	0.23835	0.0011542	NaN	40.058	61	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	378960			53650	7264	35782	35797							0.088786061428209
SFRRRGRRS	9	Unmodified	_SFRRRGRRS_					0	0	0		ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	589.342304	1176.67005	-0.67296	-0.0003966	2.4264	0.00143	1.7534	0.0010334	589.343609966198	105.09	1.3289	105.08	104.5	105.83	-0.014809	0.1407	0.0019537	NaN	40.058	68	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	551310			53651	7264	35782	35797							0.088786061428209
SFRRRGRRS	9	Unmodified	_SFRRRGRRS_					0	0	0		ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	589.342304	1176.67005	3.3446	0.0019711	-1.7084	-0.0010068	1.6362	0.00096428	589.3411560499741	104.98	1.0867	104.94	104.61	105.7	-0.04039	0.0051523	-0.0029199	NaN	40.058	56	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	501400			53652	7264	35782	35797							0.088786061428209
SFRRRGRRS	9	Unmodified	_SFRRRGRRS_					0	0	0		ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	589.342304	1176.67005	-0.6551	-0.00038608	2.54	0.001497	1.8849	0.0011109	589.3435760945529	104.86	1.2063	104.89	104.43	105.63	0.039864	-0.040237	0.0020877	NaN	40.058	65	28	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	447520			53653	7264	35782	35797							0.088786061428209
SFRRRGRRS	9	Unmodified	_SFRRRGRRS_					0	0	0		ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	589.342304	1176.67005	0.82517	0.00048631	1.1469	0.00067589	1.972	0.0011622	589.3428389312561	104.68	0.94878	104.85	104.5	105.45	0.17096	-0.086806	0.00044555	NaN	40.058	52	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	420210			53654	7264	35782	35797							0.088786061428209
SFRRRGRRS	9	Unmodified	_SFRRRGRRS_					0	0	0		ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	589.342304	1176.67005	0.88987	0.00052444	0.93352	0.00055016	1.8234	0.0010746	589.3427130527855	104.79	0.9206	104.9	104.51	105.43	0.10766	-0.037898	0.0001941	NaN	40.058	51	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	394000			53655	7264	35782	35797							0.088786061428209
SFRRRGRRS	9	Unmodified	_SFRRRGRRS_					0	0	0		ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	ENSG00000179314|ENST00000317744|WSCD1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	589.342304	1176.67005	-1.3241	-0.00078034	3.2284	0.0019026	1.9043	0.0011223	589.3441184156533	104.88	0.88403	104.97	104.55	105.44	0.093857	0.035817	0.002899	NaN	40.058	48	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	335450			53656	7264	35782	35797							0.088786061428209
SFRSQFTCP	9	Unmodified	_SFRSQFTCP_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7463989257812	2	536.747659	1071.48076	-0.65993	-0.00035422	-2.9397	-0.0015779	-3.5996	-0.0019321	536.7459714608132	69.256	1.875	69.803	69.324	71.199	0.54694					117	48	5	0	0	0	0.77244	1	7740	7740		32.812	1.2826	1	5310600	+		53657	23025	35783	35798	60850	60850					-0.05211646985367224
SFRWKYHQFRF	11	Unmodified	_SFRWKYHQFRF_					0	0	0		ENST00000568818.1_1_16:69964069-69965708:+|nuORF;nc|ENSG00000198373|O00308-3|WWP2;nc|ENSG00000198373|O00308-2|WWP2;ENSG00000198373|ENST00000359154|WWP2	ENST00000568818.1_1_16:69964069-69965708:+|nuORF;nc|ENSG00000198373|O00308-3|WWP2	nc|ENSG00000198373|O00308-3|WWP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	534.6087646484375	3	534.608993	1600.80515	0.16551	8.8482E-05	0.61265	0.00032753	0.77815	0.00041601	534.609388213352	26.348	0.74506	26.457	26.169	26.914	0.10901					88	34	4	0	0	0	0.76087	2	1006	1006;1014		19.627	5.8974	1	349720			53658	8268;13970	35784	35799	60851;60852	60851					0.02878041493886485
SFSLGIAAFL	10	Unmodified	_SFSLGIAAFL_					0	0	0		ENSG00000143315|ENST00000368090|PIGM	ENSG00000143315|ENST00000368090|PIGM	ENSG00000143315|ENST00000368090|PIGM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.2886962890625	2	513.286943	1024.55933	-0.35133	-0.00018033	-0.084217	-4.3227E-05	-0.43555	-0.00022356	513.2866476565546	73.866	0.43777	73.993	73.766	74.204	0.12711					23	17	2	0	0	0	0.84112	1	6800	6800		37.159	2.9866	1	142040			53659	4615	35785	35800	60853	60853					0.04803528591378381
SFSLGIAAFL	10	Unmodified	_SFSLGIAAFL_					0	0	0		ENSG00000143315|ENST00000368090|PIGM	ENSG00000143315|ENST00000368090|PIGM	ENSG00000143315|ENST00000368090|PIGM	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	513.286943	1024.55933	-1.076	-0.00055231	1.2243	0.00062842	0.14828	7.6112E-05	513.2874548035187	73.973	0.41241	74.059	73.895	74.307	0.085907	0.032886	0.00051653	NaN	37.159	26	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	159590			53660	4615	35785	35800							0.04803528591378381
SFSLLSVS	8	Unmodified	_SFSLLSVS_					0	0	0		ENSG00000127580|ENST00000293883|WDR24	ENSG00000127580|ENST00000293883|WDR24	ENSG00000127580|ENST00000293883|WDR24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2283935546875	2	420.229094	838.443634	-1.5729	-0.000661	-1.3827	-0.00058106	-2.9557	-0.0012421	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.884	1	7677	7677		33.516	6.7195	1	634680			53661	3509	35786	35801	60854	60854					0.017950047405292935
SFSRHLAHHF	10	Unmodified	_SFSRHLAHHF_					0	0	0		ENST00000471405.5_1_7:135366313-135386730:-|nuORF	ENST00000471405.5_1_7:135366313-135386730:-|nuORF	ENST00000471405.5_1_7:135366313-135386730:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	620.3173217773438	2	619.812513	1237.61047	0.49765	0.00030845	1.2564	0.00077873	1.754	0.0010872	619.8133144859956	53.943	0.70232	54.025	53.728	54.43	0.081524					24	17	2	0	0	0	0.60066	1	4437	4437		45.972	5.9141	1	152080			53662	12240	35787	35802	60855	60855					0.0011729040877526131
SFSRHLAHHF	10	Unmodified	_SFSRHLAHHF_					0	0	0		ENST00000471405.5_1_7:135366313-135386730:-|nuORF	ENST00000471405.5_1_7:135366313-135386730:-|nuORF	ENST00000471405.5_1_7:135366313-135386730:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	619.812513	1237.61047	-0.42873	-0.00026573	2.2127	0.0013715	1.784	0.0011057	619.8138931355971	54.115	0.49559	54.138	53.818	54.313	0.022537	0.071792	0.00045389	NaN	45.972	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62776			53663	12240	35787	35802							0.0011729040877526131
SFTEKLKLLF	10	Unmodified	_SFTEKLKLLF_					0	0	0		ENSG00000133138|ENST00000357242|TBC1D8B	ENSG00000133138|ENST00000357242|TBC1D8B	ENSG00000133138|ENST00000357242|TBC1D8B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.2470703125	3	409.244547	1224.71181	1.4748	0.00060355	2.5025	0.0010241	3.9773	0.0016277	409.2453732627111	17.404	0.35882	16.921	16.718	17.077	-0.48256					11	7	2	0	0	0	0.85834	1	260	260		22.58	0.89391	1	75120			53664	3864	35788	35803	60856	60856					0.10844304268130145
SFTFPLAIY	9	Unmodified	_SFTFPLAIY_					0	0	0		ENST00000299638.7_2_15:58008553-58008757:+|nuORF	ENST00000299638.7_2_15:58008553-58008757:+|nuORF	ENST00000299638.7_2_15:58008553-58008757:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.7789916992188	2	529.781493	1057.54843	-0.036677	-1.9431E-05	-3.8251	-0.0020265	-3.8618	-0.0020459	529.7793029461789	64.6	1.1094	64.603	64.064	65.173	0.0021362					72	32	4	0	0	0	0.5393	1	6052	6052		50.025	2.1089	1	265940			53665	9784	35789	35804	60857	60857					0.021961262170862028
SFTKYKKSA	9	Unmodified	_SFTKYKKSA_					0	0	0			REV__nc|ENSG00000262628|P47884|OR1D4	REV__nc|ENSG00000262628|P47884|OR1D4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.293212890625	2	530.295299	1058.57605	-0.034361	-1.8221E-05	-3.4792	-0.001845	-3.5136	-0.0018632	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.73802	2	9257	9257;9318		37.812	2.6595	1	1852900	+		53666	23948	35790	35805	60858;60859	60858					0.049100294773325004
SFTKYKKSA	9	Unmodified	_SFTKYKKSA_					0	0	0			REV__nc|ENSG00000262628|P47884|OR1D4	REV__nc|ENSG00000262628|P47884|OR1D4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2932739257812	2	530.295299	1058.57605	-0.066725	-3.5384E-05	-3.5889	-0.0019032	-3.6556	-0.0019386	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.71772	2	9042	8970;9042		39.253	3.6345	1	2084800	+		53667	23948	35790	35805	60860;60861	60861					0.049100294773325004
SFTKYKKSA	9	Unmodified	_SFTKYKKSA_					0	0	0			REV__nc|ENSG00000262628|P47884|OR1D4	REV__nc|ENSG00000262628|P47884|OR1D4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2933959960938	2	530.295299	1058.57605	0.74166	0.0003933	-4.3452	-0.0023043	-3.6036	-0.001911	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.55097	2	9124	8992;9124		49.442	10.189	1	2081200	+		53668	23948	35790	35805	60862;60863	60863					0.049100294773325004
SFTKYKKSA	9	Unmodified	_SFTKYKKSA_					0	0	0			REV__nc|ENSG00000262628|P47884|OR1D4	REV__nc|ENSG00000262628|P47884|OR1D4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2932739257812	2	530.295299	1058.57605	-1.5163	-0.00080409	-2.0724	-0.001099	-3.5887	-0.0019031	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.71772	1	8987	8987		39.253	5.0803	1	1686700	+		53669	23948	35790	35805	60864	60864					0.049100294773325004
SFTKYKKSA	9	Unmodified	_SFTKYKKSA_					0	0	0			REV__nc|ENSG00000262628|P47884|OR1D4	REV__nc|ENSG00000262628|P47884|OR1D4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2929077148438	2	530.295299	1058.57605	-1.2396	-0.00065735	-2.6354	-0.0013976	-3.875	-0.0020549	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.71772	1	10770	10770		39.253	1.4413	1	1818700	+		53670	23948	35790	35805	60865	60865					0.049100294773325004
SFVHSETRYI	10	Unmodified	_SFVHSETRYI_					0	0	0			REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1	REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.81396484375	2	619.811845	1237.60914	-0.40514	-0.00025111	3.1339	0.0019425	2.7288	0.0016913	619.8137575477526	54.044	0.61377	54.019	53.689	54.303	-0.024754					24	15	2	0	0	0	0.69342	1	4848	4848		25.574	0	1	90771	+		53671	17646	35791	35806	60866	60866					-0.0001638847061258275
SFVHVTVF	8	Unmodified	_SFVHVTVF_					0	0	0		ENST00000464733.5_1_1:110198981-110200115:+|nuORF	ENST00000464733.5_1_1:110198981-110200115:+|nuORF	ENST00000464733.5_1_1:110198981-110200115:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.25469970703125	2	468.252903	934.491253	0.516	0.00024162	3.6072	0.0016891	4.1232	0.0019307	468.25439307684206	81.814	3.5851	81.751	80.618	84.204	-0.062943					157	83	2	0	0	0	0.88915	1	8263	8263		35.201	1.6851	1	180670			53672	12095	35792	35807	60867	60867					0.021387037313843393
SFVNPIRLKPP	11	Unmodified	_SFVNPIRLKPP_					0	0	0			REV__ENSG00000152527|ENST00000282406|PLEKHH2	REV__ENSG00000152527|ENST00000282406|PLEKHH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3768920898438	2	634.379697	1266.74484	-0.13787	-8.7463E-05	-3.847	-0.0024405	-3.9849	-0.0025279	634.377061455115	118.49	0.49898	118.42	118.19	118.69	-0.07531					48	18	4	0	0	0	0.77061	1	12711	12711		17.468	0.10304	1	1728300	+		53673	20304	35793	35808	60868	60868					0.12213931110841258
SFVNPIRLKPP	11	Unmodified	_SFVNPIRLKPP_					0	0	0			REV__ENSG00000152527|ENST00000282406|PLEKHH2	REV__ENSG00000152527|ENST00000282406|PLEKHH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3767700195312	2	634.379697	1266.74484	-1.1775	-0.000747	-2.9159	-0.0018498	-4.0934	-0.0025968	634.377772508187	111.36	0.34248	111.34	111.22	111.56	-0.019882					23	12	2	0	0	0	0.72739	1	11870	11870		27.047	0.3544	1	3757500	+		53674	20304	35793	35808	60869	60869					0.12213931110841258
SFVVFLVF	8	Unmodified	_SFVVFLVF_					0	0	0			REV__nc|nan|A6NFR6|C5orf60;REV__nc|nan|A6NFR6-3|C5orf60	REV__nc|nan|A6NFR6|C5orf60	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.278076171875	2	479.275847	956.537141	-0.097427	-4.6695E-05	4.0846	0.0019577	3.9872	0.001911	479.2777564513445	97.555	2.08	97.612	96.988	99.068	0.056831					95	47	3	0	0	0	0.86791	1	10284	10284		28.254	3.7503	1	964120	+		53675	30324;30323	35794	35809	60870	60870					0.05713348913616301
SFVVIVKATSN	11	Unmodified	_SFVVIVKATSN_					0	0	0			REV__ENSG00000036828|ENST00000639785|CASR	REV__ENSG00000036828|ENST00000639785|CASR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.8331909179688	2	582.834788	1163.65502	-0.40612	-0.0002367	-3.2681	-0.0019048	-3.6742	-0.0021415	582.832911894326	94.456	2.7605	94.456	93.622	96.382	0					111	64	3	0	0	0	0.67778	1	9337	9337		35.152	5.982	1	367730	+		53676	16296	35795	35810	60871	60871					0.07974256711622729
SFYHIQKLTC	10	Unmodified	_SFYHIQKLTC_					0	0	0		L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|33|2|sense	L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|33|2|sense	L1PA16_dup8359|chrX:76187111-76188607:-|1.6635292902519196|0.4672346661310608|1.83|63.0|33|2|sense	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	620.31201171875	2	620.313166	1238.61178	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.72	1	113.72	113.22	114.22	0								0	0	0	0.45132	1	11743	11743		19.997	3.99	1				53677	14619	35796	35811	60872	60872					0.0020174366268292943
SFYSSLGCGH	10	Unmodified	_SFYSSLGCGH_					0	0	0		nc|ENSG00000169402|B2RC85-2|RSPH10B2;ENSG00000169402|ENST00000404077|RSPH10B2;ENSG00000155026|ENST00000404406|RSPH10B	nc|ENSG00000169402|B2RC85-2|RSPH10B2	nc|ENSG00000169402|B2RC85-2|RSPH10B2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	529.2246704101562	2	529.224017	1056.43348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.697	1	61.697	61.197	62.197	0								0	0	0	0.45132	1	5402	5402		30.504	2.6214	1				53678	5307	35797	35812	60873	60873					-0.09247926256330175
SGAAVWRP	8	Unmodified	_SGAAVWRP_					0	0	0			REV__ENSG00000155275|ENST00000389737|TRMT44	REV__ENSG00000155275|ENST00000389737|TRMT44	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2276306152344	2	422.22722	842.439886	-0.23253	-9.8181E-05	2.3663	0.00099912	2.1338	0.00090093	422.22799132791033	63.825	0.73808	63.79	63.288	64.026	-0.034252					56	26	3	0	0	0	0.84341	1	6094	6094		24.203	0	1	242530	+		53679	20420	35798	35813	60874	60874					0.012363797573243573
SGAAVWRP	8	Unmodified	_SGAAVWRP_					0	0	0			REV__ENSG00000155275|ENST00000389737|TRMT44	REV__ENSG00000155275|ENST00000389737|TRMT44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2281188964844	2	422.22722	842.439886	0.34219	0.00014448	1.4561	0.00061482	1.7983	0.0007593	422.22773189894326	57.189	1.8785	57.295	56.929	58.807	0.1055					192	88	3	0	0	0	0.87479	1	4849	4849		30.504	3.8107	1	718200	+		53680	20420	35798	35813	60875	60875					0.012363797573243573
SGAAVWRP	8	Unmodified	_SGAAVWRP_					0	0	0			REV__ENSG00000155275|ENST00000389737|TRMT44	REV__ENSG00000155275|ENST00000389737|TRMT44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2286071777344	2	422.22722	842.439886	-0.783	-0.0003306	2.5751	0.0010873	1.7922	0.0007567	422.2282038382867	57.222	1.4902	57.202	56.824	58.314	-0.01947					144	72	3	0	0	0	0.89962	1	4854	4854		38.806	6.8513	1	642490	+		53681	20420	35798	35813	60876	60876					0.012363797573243573
SGAAVWRP	8	Unmodified	_SGAAVWRP_					0	0	0			REV__ENSG00000155275|ENST00000389737|TRMT44	REV__ENSG00000155275|ENST00000389737|TRMT44	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2279357910156	2	422.22722	842.439886	-0.60376	-0.00025492	2.3817	0.0010056	1.778	0.00075071	422.22811519815747	58.653	1.6997	59.045	58.275	59.974	0.39209					73	40	3	0	0	0	0.86288	1	6148	6148		26.796	0	1	402150	+		53682	20420	35798	35813	60877	60877					0.012363797573243573
SGAAVWRP	8	Unmodified	_SGAAVWRP_					0	0	0			REV__ENSG00000155275|ENST00000389737|TRMT44	REV__ENSG00000155275|ENST00000389737|TRMT44	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	422.22722	842.439886	-1.0163	-0.00042911	3.0806	0.0013007	2.0643	0.0008716	422.2283841733275	63.841	0.75198	63.872	63.292	64.044	0.030247	-0.011392	0.00013453	NaN	24.203	57	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211120	+		53683	20420	35798	35813							0.012363797573243573
SGAAVWRP	8	Unmodified	_SGAAVWRP_					0	0	0			REV__ENSG00000155275|ENST00000389737|TRMT44	REV__ENSG00000155275|ENST00000389737|TRMT44	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	422.22722	842.439886	-0.60376	-0.00025492	2.3817	0.0010056	1.778	0.00075071	422.22811519815747	58.653	1.6997	59.045	58.275	59.974	0.39209	-0.037143	0.00021458	NaN	26.796	73	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	402150	+		53684	20420	35798	35813							0.012363797573243573
SGAKKRVS	8	Unmodified	_SGAKKRVS_					0	0	0			REV__ENSG00000172375|ENST00000648610|C2CD2L	REV__ENSG00000172375|ENST00000648610|C2CD2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7550354003906	2	416.753601	831.49265	-0.10214	-4.2565E-05	3.3489	0.0013957	3.2468	0.0013531	416.75501653690895	52.816	0.66201	53.43	53.116	53.778	0.61436					50	15	4	0	0	0	0.89043	1	5330	5330		35.618	2.8059	1	1457300	+		53685	21827	35799	35814	60878	60878					0.07016337820130047
SGAKKRVS	8	Unmodified	_SGAKKRVS_					0	0	0			REV__ENSG00000172375|ENST00000648610|C2CD2L	REV__ENSG00000172375|ENST00000648610|C2CD2L	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	416.753601	831.49265	0.61976	0.00025829	2.7614	0.0011508	3.3811	0.0014091	416.75466182883565	53.046	0.74026	53.46	53.128	53.868	0.4139	0.014995	-7.4897E-05	NaN	35.618	40	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1098900	+		53686	21827	35799	35814							0.07016337820130047
SGAPGAGRH	9	Unmodified	_SGAPGAGRH_					0	0	0		ENST00000361132.8_1_5:179563414-179636070:-|nuORF	ENST00000361132.8_1_5:179563414-179636070:-|nuORF	ENST00000361132.8_1_5:179563414-179636070:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.2044982910156	2	405.204276	808.393999	-0.0495	-2.0058E-05	1.1279	0.00045704	1.0784	0.00043698	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.7932	1	7794	7794		20.947	0	1	162370			53687	10466	35800	35815	60879	60879					-0.01786265424902922
SGARAQGRR	9	Unmodified	_SGARAQGRR_					0	0	0			REV__ENST00000415992.5_1_9:139702603-139703092:+|nuORF	REV__ENST00000415992.5_1_9:139702603-139703092:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.7645568847656	2	479.768106	957.521659	-0.74459	-0.00035723	-4.0422	-0.0019393	-4.7868	-0.0022966	479.76609977021917	80.277	1.2892	80.803	80.317	81.607	0.52676					70	30	4	0	0	0	0.77696	1	9301	9301		31.53	1.0262	1	5775600	+		53688	26427	35801	35816	60880	60880					0.04119875169135412
SGAVWRAP	8	Unmodified	_SGAVWRAP_					0	0	0			REV__ENSG00000166106|ENST00000299164|ADAMTS15	REV__ENSG00000166106|ENST00000299164|ADAMTS15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2281188964844	2	422.22722	842.439886	-1.5227	-0.00064292	3.5197	0.0014861	1.997	0.00084319	422.2286072039903	64.658	1.0335	64.658	64.292	65.325	0					111	47	3	0	0	0	0.84341	1	5714	5714		24.203	1.1603	1	501820	+		53689	21250	35802	35817	60881	60881					0.012363797573243573
SGAVWRAP	8	Unmodified	_SGAVWRAP_					0	0	0			REV__ENSG00000166106|ENST00000299164|ADAMTS15	REV__ENSG00000166106|ENST00000299164|ADAMTS15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2284240722656	2	422.22722	842.439886	-0.13065	-5.5165E-05	1.9429	0.00082033	1.8122	0.00076517	422.22796406117556	54.637	1.4643	55.205	54.858	56.322	0.56836					63	34	3	0	0	0	0.87479	1	5589	5589		30.504	1.3541	1	943930	+		53690	21250	35802	35817	60882	60882					0.012363797573243573
SGAWCRGSL	9	Unmodified	_SGAWCRGSL_					0	0	0			REV__nc|ENSG00000116455|Q9BQA1-2|WDR77	REV__nc|ENSG00000116455|Q9BQA1-2|WDR77	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7228088378906	2	468.721444	935.428335	-0.27946	-0.00013099	4.2013	0.0019692	3.9218	0.0018382	468.7234027551395	85.666	1.1864	86.109	85.545	86.731	0.44331					75	28	4	0	0	0	0.73802	1	10011	10011		37.812	2.1932	1	844910	+		53691	18199	35803	35818	60883	60883					-0.04196185328305546
SGAYTPVHPPP	11	Unmodified	_SGAYTPVHPPP_					0	0	0		ENST00000515743.5_1_4:10093426-10093663:-|nuORF	ENST00000515743.5_1_4:10093426-10093663:-|nuORF	ENST00000515743.5_1_4:10093426-10093663:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.780517578125	2	561.782556	1121.55056	0.527	0.00029606	-1.1587	-0.00065096	-0.63174	-0.0003549	561.7818342872105	46.93	0.51568	46.926	46.68	47.195	-0.0041618					24	12	2	0	0	0	0.68378	1	3835	3835		34.173	1.3601	1	156360			53692	13090	35804	35819	60884	60884					-0.005354450451022785
SGEDRTLSKM	10	Oxidation (M)	_SGEDRTLSKM(Oxidation (M))_		SGEDRTLSKM(1)		SGEDRTLSKM(51)	0	0	1		ENST00000496968.5_1_7:143997625-144008999:-|nuORF;ENST00000467944.5_1_7:144004303-144008999:-|nuORF	ENST00000496968.5_1_7:143997625-144008999:-|nuORF	ENST00000496968.5_1_7:143997625-144008999:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	572.2705078125	2	570.271695	1138.52884	0.0095359	5.4381E-06	0.34267	0.00019542	0.35221	0.00020085	570.2721146473531	57.865	0.8409	57.836	57.527	58.368	-0.029861					60	21	5	0	0	0	0.57924	1	5371	5371		51.193	15.574	1	270170			53693	12166	35805	35820	60885	60885		187			-0.034886178559645487
SGERKGLRELH	11	Unmodified	_SGERKGLRELH_					0	0	0		ENSG00000139549|ENST00000649637|DHH	ENSG00000139549|ENST00000649637|DHH	ENSG00000139549|ENST00000649637|DHH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.85986328125	2	641.354742	1280.69493	2.1015	0.0013478	1.0864	0.00069677	3.1879	0.0020446	641.8572268612736	114.29	2.4777	114.3	113.86	116.34	0.0094528					148	121	2	0	0	0	0.62614	1	13860	13860		41.427	0	1	210520			53694	4378	35806	35821	60886	60886					0.06581196434899539
SGFKKRLF	8	Unmodified	_SGFKKRLF_					0	0	0			REV__ENST00000311764.2_1_11:46722478-46722529:+|nuORF	REV__ENST00000311764.2_1_11:46722478-46722529:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7953796386719	2	491.795269	981.575986	-1.6029	-0.00078829	2.358	0.0011597	0.75513	0.00037137	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.84341	1	3365	3365		24.203	3.2558	1	603870	+		53695	24911	35807	35822	60887	60887					0.08446074267988024
SGFKKRLF	8	Unmodified	_SGFKKRLF_					0	0	0			REV__ENST00000311764.2_1_11:46722478-46722529:+|nuORF	REV__ENST00000311764.2_1_11:46722478-46722529:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957458496094	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.884	1	4652	4652		33.516	10.473	1	1759500	+		53696	24911	35807	35822	60888	60888					0.08446074267988024
SGFVTIILG	9	Unmodified	_SGFVTIILG_					0	0	0		nc|ENSG00000172548|Q0D2K0-2|NIPAL4;ENSG00000172548|ENST00000311946|NIPAL4	nc|ENSG00000172548|Q0D2K0-2|NIPAL4	nc|ENSG00000172548|Q0D2K0-2|NIPAL4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.76654052734375	2	453.768386	905.522219	-1.5185	-0.00068905	-3.2881	-0.001492	-4.8066	-0.0021811	453.766963530374	71.765	0.95408	72.149	71.628	72.582	0.38449					69	22	5	0	0	0	0.74721	1	7971	7971		37.159	1.5408	1	869760			53697	6776	35808	35823	60889	60889					0.0656785704561571
SGGAAGAP	8	Unmodified	_SGGAAGAP_					0	0	0		nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238252944-238263658:-|nuORF	nc|ENSG00000163359|P12111-4|COL6A3	nc|ENSG00000163359|P12111-4|COL6A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	587.0042114257812	1	587.278366	586.271089	0.75371	0.00044264	1.3416	0.00078791	2.0953	0.0012305	587.2817717335898	77.746	0.081871	77.871	77.82	77.902	0.12486					4	2	2	0	0	0	0.884	1	7310	7310		33.516	6.7195	1	21398			53698	5787	35809	35824	60890	60890					-0.038595218761997785
SGGAVRPR	8	Unmodified	_SGGAVRPR_					0	0	0			REV__ENST00000402690.6_3_18:45423156-45457422:-|nuORF	REV__ENST00000402690.6_3_18:45423156-45457422:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2282409667969	2	400.230294	798.446034	-1.8752	-0.0007505	-2.6209	-0.001049	-4.4961	-0.0017995	400.22927707495484	54.825	2.6613	54.881	53.254	55.915	0.055611					132	91	2	0	0	0	0.86677	1	4597	4597		27.882	1.1893	1	1098100	+		53699	26264	35810	35825	60891	60891					0.038748979888509893
SGGCKMPKK	9	Unmodified	_SGGCKMPKK_					0	0	0		ENSG00000174502|ENST00000367135|SLC26A9;nc|ENSG00000174502|Q7LBE3-2|SLC26A9	ENSG00000174502|ENST00000367135|SLC26A9	ENSG00000174502|ENST00000367135|SLC26A9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2438659667969	2	468.243698	934.472843	0.29202	0.00013673	3.1538	0.0014767	3.4458	0.0016135	468.2450405248042	47.413	2.7091	47.451	46.842	49.551	0.037731					201	76	4	0	0	0	0.76255	1	3688	3688		35.618	0.41757	1	7645500			53700	6942	35811	35826	60892	60892					0.002985024935128422
SGGCKMPKK	9	Unmodified	_SGGCKMPKK_					0	0	0		ENSG00000174502|ENST00000367135|SLC26A9;nc|ENSG00000174502|Q7LBE3-2|SLC26A9	ENSG00000174502|ENST00000367135|SLC26A9	ENSG00000174502|ENST00000367135|SLC26A9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.240966796875	2	468.243698	934.472843	-0.94328	-0.00044168	-3.9977	-0.0018719	-4.941	-0.0023136	468.2416805322929	38.745	0.58432	39.087	38.817	39.401	0.34187					31	13	4	0	0	0	0.73802	1	3211	3211		37.812	3.639	1	954080			53701	6942	35811	35826	60893	60893					0.002985024935128422
SGGGCGPG	8	Unmodified	_SGGGCGPG_					0	0	0			REV__nc|ENSG00000186732|O15442-2|MPPED1	REV__nc|ENSG00000186732|O15442-2|MPPED1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8162841796875	1	591.219137	590.21186	-1.7415	-0.0010296	0.1404	8.3008E-05	-1.6011	-0.00094661	591.2192296414645	53.001	0.76279	53.019	52.488	53.251	0.017487					25	19	2	0	0	0	0.4196	1	4581	4581		9.4706	0	1	82914	+		53702	30110	35812	35827	60894	60894					-0.09963741162027873
SGGGPADLVKI	11	Unmodified	_SGGGPADLVKI_					0	0	0			REV__ENSG00000141560|ENST00000269373|FN3KRP	REV__ENSG00000141560|ENST00000269373|FN3KRP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.781982421875	2	507.284931	1012.55531	-0.47763	-0.00024229	0.51669	0.00026211	0.039059	1.9814E-05	507.2849298492895	49.042	0.60685	49.502	49.223	49.83	0.45983					21	14	2	0	0	0	0.16675	1	4749	4749		47.96	0	1	518180	+		53703	19696	35813	35828	60895	60895					0.04953439097675982
SGGGPRRL	8	Unmodified	_SGGGPRRL_					0	0	0			REV__ENST00000316615.9_1_17:73401676-73401748:-|nuORF	REV__ENST00000316615.9_1_17:73401676-73401748:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2285461425781	2	400.230294	798.446034	-1.8752	-0.0007505	-2.6209	-0.001049	-4.4961	-0.0017995	400.22927707495484	54.825	2.6613	54.881	53.254	55.915	0.055611					132	91	2	0	0	0	0.80706	1	4580	4580		19.36	1.0356	1	1098100	+		53704	24954	35814	35829	60896	60896					0.038748979888509893
SGGHARRA	8	Unmodified	_SGGHARRA_					0	0	0			REV__ENST00000392588.5_1_6:110499922-110500924:-|nuORF	REV__ENST00000392588.5_1_6:110499922-110500924:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.217041015625	2	406.217717	810.420882	2.9241	0.0011878	-3.1263	-0.0012699	-0.20219	-8.2134E-05	406.2163885181213	85.735	1.3725	85.793	85.282	86.655	0.057899					48	31	2	0	0	0	0.79929	1	8721	8721		18.324	0.95945	1	240170	+		53705	26024	35815	35830	60897	60897					0.008088431862688594
SGGIRKLRAF	10	Unmodified	_SGGIRKLRAF_					0	0	0			REV__ENSG00000133958|ENST00000695012|UNC79	REV__ENSG00000133958|ENST00000695012|UNC79	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3358764648438	2	552.835457	1103.65636	-0.74602	-0.00041243	-1.6881	-0.00093326	-2.4342	-0.0013457	552.8344221073519	82.073	1.2669	82.073	81.549	82.816	0					61	32	2	0	0	0	0.86589	1	7635	7635		29.15	2.4566	1	174970	+		53706	19104	35816	35831	60898	60898					0.10867935590999878
SGGKKALGKH	10	Unmodified	_SGGKKALGKH_					0	0	0		ENSG00000155816|ENST00000319653|FMN2	ENSG00000155816|ENST00000319653|FMN2	ENSG00000155816|ENST00000319653|FMN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79644775390625	2	491.793258	981.571963	0.13478	6.6286E-05	4.4765	0.0022015	4.6113	0.0022678	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.86272	2	5595	5584;5595		29.17	1.2878	1	176030			53707	5342	35817	35832	60899;60900	60900					0.08043984774269575
SGGKTLEDV	9	Unmodified	_SGGKTLEDV_					0	0	0		ENSG00000147614|ENST00000285393|ATP6V0D2	ENSG00000147614|ENST00000285393|ATP6V0D2	ENSG00000147614|ENST00000285393|ATP6V0D2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.2275085449219	2	453.232364	904.450176	0.40569	0.00018387	0.3006	0.00013624	0.70629	0.00032011	453.23162469283216	82.345	2.699	82.282	80.315	83.014	-0.062943					130	63	3	0	0	0	0.20789	1	8076	8076		40.778	3.6191	1	96759			53708	4917	35818	35833	60901	60901					-0.005871020987569864
SGGLALKHP	9	Unmodified	_SGGLALKHP_					0	0	0		ENST00000480436.5_1_20:13415759-13610725:-|nuORF;ENSG00000089123|ENST00000337743|TASP1	ENST00000480436.5_1_20:13415759-13610725:-|nuORF	ENST00000480436.5_1_20:13415759-13610725:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.2553405761719	2	440.255977	878.497401	0.56693	0.00024959	-1.6828	-0.00074086	-1.1159	-0.00049126	440.25498228368036	67.776	1.0155	67.806	67.426	68.441	0.030563					83	37	3	0	0	0	0.7932	1	6456	6456		21.96	3.6355	1	230880			53709	1609	35819	35834	60902	60902					0.05329221962892916
SGGLAVLPV	9	Unmodified	_SGGLAVLPV_					0	0	0		ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.74896240234375	2	406.747453	811.480354	1.144	0.00046531	2.2133	0.00090027	3.3573	0.0013656	406.7484517659752	36.617	1.5311	36.628	35.799	37.33	0.011173					55	33	2	0	0	0	0.7932	1	2380	2380		24.203	0	1	111720			53710	3384	35820	35835	60903	60903					0.06707301357096185
SGGLAVLPV	9	Unmodified	_SGGLAVLPV_					0	0	0		ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.29632568359375	2	406.747453	811.480354	0.15405	6.2661E-05	3.1595	0.0012851	3.3136	0.0013478	406.74882699189277	36.236	1.5077	36.339	35.842	37.35	0.10306					70	44	2	0	0	0	0.20789	1	2085	2085		40.573	8.6178	1	71364			53711	3384	35820	35835	60904	60904					0.06707301357096185
SGGLAVLPV	9	Unmodified	_SGGLAVLPV_					0	0	0		ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.29583740234375	2	406.747453	811.480354	-0.14446	-5.876E-05	3.8102	0.0015498	3.6657	0.001491	406.7489803321521	37.822	1.6256	37.764	37.079	38.705	-0.057915					69	50	2	0	0	0	0.20789	1	2123	2123		42.474	11.971	1	96240			53712	3384	35820	35835	60905	60905					0.06707301357096185
SGGLAVLPV	9	Unmodified	_SGGLAVLPV_					0	0	0		ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.747453	811.480354	-1.9107	-0.00077716	5.6733	0.0023076	3.7626	0.0015304	406.7497635337018	37.648	1.8908	37.648	37.174	39.065	0	-0.1987	0.000974	NaN	42.474	81	45	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119310			53713	3384	35820	35835							0.06707301357096185
SGGLAVLPV	9	Unmodified	_SGGLAVLPV_					0	0	0		ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.747453	811.480354	-1.1404	-0.00046385	5.0002	0.0020338	3.8598	0.00157	406.74949078208016	37.966	1.8386	37.915	37.317	39.155	-0.050369	0.068644	0.0004265	NaN	42.474	75	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83055			53714	3384	35820	35835							0.06707301357096185
SGGLAVLPV	9	Unmodified	_SGGLAVLPV_					0	0	0		ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	ENSG00000125384|ENST00000245457|PTGER2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.747453	811.480354	-1.906	-0.00077526	5.3219	0.0021647	3.4159	0.0013894	406.74966214160406	38.039	1.441	38.056	37.575	39.016	0.016563	0.20878	0.00068816	NaN	42.474	60	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68903			53715	3384	35820	35835							0.06707301357096185
SGGMGFKIH	9	Unmodified	_SGGMGFKIH_					0	0	0		ENST00000537619.6_1_12:71058148-71058262:-|nuORF	ENST00000537619.6_1_12:71058148-71058262:-|nuORF	ENST00000537619.6_1_12:71058148-71058262:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.23358154296875	2	467.234187	932.453822	-0.26264	-0.00012271	-2.1411	-0.0010004	-2.4037	-0.0011231	467.23346633413524	64.606	2.155	65.159	64.517	66.672	0.55386					169	56	5	0	0	0	0.47272	1	7053	7053		53.351	4.1407	1	8508300			53716	13452	35821	35836	60906	60906					-0.015107108058941776
SGGPRWLA	8	Unmodified	_SGGPRWLA_					0	0	0			REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2286682128906	2	422.22722	842.439886	-1.6279	-0.00068734	3.5948	0.0015178	1.9669	0.00083048	422.2286431542634	57.254	2.0219	57.254	56.929	58.951	0					133	84	2	0	0	0	0.86791	3	4894	4894;4902;4911		28.254	2.8041	1	766060	+		53717	27304	35822	35837	60907;60908;60909	60907					0.012363797573129887
SGGPRWLA	8	Unmodified	_SGGPRWLA_					0	0	0			REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2282409667969	2	422.22722	842.439886	-1.8115	-0.00076488	3.6243	0.0015303	1.8127	0.00076538	422.2286507629438	57.274	2.0296	57.354	56.645	58.675	0.079643					188	95	3	0	0	0	0.86791	1	4852	4852		28.254	1.4582	1	748250	+		53718	27304	35822	35837	60910	60910					0.012363797573129887
SGGPRWLA	8	Unmodified	_SGGPRWLA_					0	0	0			REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.22857666015625	2	422.22722	842.439886	0.34219	0.00014448	1.4561	0.00061482	1.7983	0.0007593	422.22773189894326	57.189	1.8785	57.295	56.929	58.807	0.1055					192	88	3	0	0	0	0.88915	1	4842	4842		35.201	1.6851	1	718200	+		53719	27304	35822	35837	60911	60911					0.012363797573129887
SGGPRWLA	8	Unmodified	_SGGPRWLA_					0	0	0			REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2288818359375	2	422.22722	842.439886	0.38075	0.00016076	0.76925	0.0003248	1.15	0.00048556	422.22752903910396	61.401	1.1417	61.52	61.387	62.529	0.11901					70	54	2	0	0	0	0.85277	1	5349	5349		25.45	4.9683	1	712460	+		53720	27304	35822	35837	60912	60912					0.012363797573129887
SGGPRWLA	8	Unmodified	_SGGPRWLA_					0	0	0			REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.22772216796875	2	422.22722	842.439886	-0.783	-0.0003306	2.5751	0.0010873	1.7922	0.0007567	422.2282038382867	57.222	1.4902	57.202	56.824	58.314	-0.01947					144	72	3	0	0	0	0.88915	1	4836	4836		35.201	3.2459	1	642490	+		53721	27304	35822	35837	60913	60913					0.012363797573129887
SGGPRWLA	8	Unmodified	_SGGPRWLA_					0	0	0			REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	REV__ENST00000474488.1_1_2:234343429-234350860:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2281799316406	2	422.22722	842.439886	0.73615	0.00031082	1.0409	0.00043948	1.777	0.0007503	422.22756865248357	54.832	1.4557	55.239	54.948	56.404	0.40663					59	34	3	0	0	0	0.884	2	5610	5610;5624		35.201	6.7195	1	872870	+		53722	27304	35822	35837	60914;60915	60914					0.012363797573129887
SGGQRKGPP	9	Unmodified	_SGGQRKGPP_					0	0	0			REV__ENST00000555427.1_1_16:89985295-89985397:+|nuORF	REV__ENST00000555427.1_1_16:89985295-89985397:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2409973144531	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.78536	1	7392	7392		29.15	3.6994	1	1219900	+		53723	28683	35823	35838	60916	60916					0.021228632977113193
SGGRFRLYF	9	Unmodified	_SGGRFRLYF_					0	0	0		ENSG00000133124|ENST00000372129|IRS4;nc|ENSG00000133124|O14654|IRS4	ENSG00000133124|ENST00000372129|IRS4	ENSG00000133124|ENST00000372129|IRS4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.7770385742188	2	551.793258	1101.57196	-0.39753	-0.00021935	3.4047	0.0018787	3.0072	0.0016593	551.7949310910243	54.647	0.33543	55.216	55.069	55.404	0.56836					9	7	2	0	0	0	0.20789	1	5583	5583		17.365	2.0319	1	121310			53724	3861	35824	35839	60917	60917					0.025239847742795973
SGGRGPGGKK	10	Unmodified	_SGGRGPGGKK_					0	0	0			REV__nc|ENSG00000182149|P53990-6|IST1;REV__nc|ENSG00000182149|P53990-3|IST1	REV__nc|ENSG00000182149|P53990-6|IST1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.7554016113281	2	450.754133	899.493713	-1.2719	-0.00057332	1.3247	0.00059711	0.052796	2.3798E-05	450.7546758979468	81.682	3.9504	81.682	80.4	84.351	0					234	110	3	0	0	0	0.86272	1	7600	7600		24.519	0.31644	1	177450	+		53725	22502;30077	35825	35840	60918	60918					0.039945521890558666
SGGRGPGGKK	10	Unmodified	_SGGRGPGGKK_					0	0	0			REV__nc|ENSG00000182149|P53990-6|IST1;REV__nc|ENSG00000182149|P53990-3|IST1	REV__nc|ENSG00000182149|P53990-6|IST1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7574768066406	2	450.754133	899.493713	0.36741	0.00016561	0.13246	5.9707E-05	0.49987	0.00022532	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.76096	2	8328	8280;8328		41.427	5.8083	1	394230	+		53726	22502;30077	35825	35840	60919;60920	60920					0.039945521890558666
SGGRGPGGKK	10	Unmodified	_SGGRGPGGKK_					0	0	0			REV__nc|ENSG00000182149|P53990-6|IST1;REV__nc|ENSG00000182149|P53990-3|IST1	REV__nc|ENSG00000182149|P53990-6|IST1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7540588378906	2	450.754133	899.493713	-1.264	-0.00056978	1.3912	0.00062708	0.12712	5.7301E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.78666	2	7783	7783;7847		40.058	8.1033	1	414240	+		53727	22502;30077	35825	35840	60921;60922	60921					0.039945521890558666
SGGRGPGGKK	10	Unmodified	_SGGRGPGGKK_					0	0	0			REV__nc|ENSG00000182149|P53990-6|IST1;REV__nc|ENSG00000182149|P53990-3|IST1	REV__nc|ENSG00000182149|P53990-6|IST1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.75457763671875	2	450.754133	899.493713	0.58167	0.00026219	-0.53401	-0.00024071	0.047657	2.1482E-05	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.86802	1	7719	7719		27.047	0.25122	1	285810	+		53728	22502;30077	35825	35840	60923	60923					0.039945521890558666
SGGRIHMS	8	Unmodified	_SGGRIHMS_					0	0	0		ENSG00000166855|ENST00000300107|CLPX;ENST00000558958.1_1_15:65449172-65477491:-|nuORF	ENSG00000166855|ENST00000300107|CLPX	ENSG00000166855|ENST00000300107|CLPX	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.592529296875	2	422.708337	843.40212	0.080395	3.3984E-05	2.6763	0.0011313	2.7566	0.0011653	422.70939536984605	52.606	0.49854	53.22	52.95	53.449	0.61436					21	11	2	0	0	0	0.4196	1	5272	5272		25.45	10.585	1	157180			53729	6236	35826	35841	60924	60924					-0.025844544997880803
SGGRIHMS	8	Unmodified	_SGGRIHMS_					0	0	0		ENSG00000166855|ENST00000300107|CLPX;ENST00000558958.1_1_15:65449172-65477491:-|nuORF	ENSG00000166855|ENST00000300107|CLPX	ENSG00000166855|ENST00000300107|CLPX	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	422.708337	843.40212	0.28113	0.00011883	3.4693	0.0014665	3.7505	0.0015854	422.70951953411407	52.839	0.62	53.262	53.012	53.632	0.42348	0.021097	0.00037016	NaN	12.207	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156160			53730	6236	35826	35841							-0.025844544997880803
SGGRKYNT	8	Unmodified	_SGGRKYNT_					0	0	0		nc|ENSG00000185658|Q9NSI6-3|BRWD1;ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1	nc|ENSG00000185658|Q9NSI6-3|BRWD1	nc|ENSG00000185658|Q9NSI6-3|BRWD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7869567871094	2	441.725041	881.435529	-1.3149	-0.00058084	-1.4155	-0.00062526	-2.7304	-0.0012061	441.7244488096621	40.802	0.10355	41.391	41.312	41.416	0.58915					4	2	2	0	0	0	0.4196	1	3530	3530		37.159	0	1	442660			53731	7732	35827	35842	60925	60925					-0.009931294562534276
SGGRRGCL	8	Unmodified	_SGGRRGCL_					0	0	0			REV__chr19:42302325-42302522|39|33.44|0.18|7.51|-|2|PAFAH1B3,None|1	REV__chr19:42302325-42302522|39|33.44|0.18|7.51|-|2|PAFAH1B3,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.20880126953125	2	403.208504	804.402455	0.59952	0.00024173	0.52963	0.00021355	1.1291	0.00045528	403.20865750603866	85.732	1.8224	85.881	85.428	87.25	0.14857					100	42	4	0	0	0	0.8347	1	8416	8416		23.042	0	1	1321000	+		53732	15705	35828	35843	60926	60926					-0.007570347799287447
SGGSDRNSMD	10	Unmodified	_SGGSDRNSMD_					0	0	0		ENSG00000121057|ENST00000337714|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.729248046875	2	513.20127	1024.38799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.443	1	64.996	64.496	65.496	0.55386								0	0	0	0.45132	1	6984	6984		23.523	2.5758	1				53733	3163	35829	35844	60927	60927					-0.1232319650938507
SGGSGSFGDT	10	Unmodified	_SGGSGSFGDT_					0	0	0			REV__nc|ENSG00000158161|Q99504-2|EYA3	REV__nc|ENSG00000158161|Q99504-2|EYA3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.17449951171875	2	436.175047	870.33554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.412	1	62.526	62.026	63.026	0.11388								0	0	0	0.45132	1	5439	5439		20.947	0.95016	1		+		53734	20593	35830	35845	60928	60928					-0.10481411580713029
SGGSKRGRM	9	Unmodified	_SGGSKRGRM_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.2434387207031	2	468.245618	934.476682	0.1062	4.9729E-05	-0.79586	-0.00037266	-0.68966	-0.00032293	468.2450979766261	47.531	1.8726	47.521	47.036	48.909	-0.0093269					110	52	3	0	0	0	0.74721	1	3946	3946		37.159	3.6435	1	1766700	+		53735	16807	35831	35846	60929	60929					0.006823083115932604
SGGTSILRKTT	11	Unmodified	_SGGTSILRKTT_					0	0	0		CON__Q8VED5	CON__Q8VED5	CON__Q8VED5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.8197631835938	2	560.81967	1119.62479	0.78776	0.00044179	-0.54226	-0.00030411	0.2455	0.00013768	560.8192753742564	92.439	2.8901	92.598	91.192	94.082	0.15874					209	68	4	0	0	0	0.70584	1	9292	9292		30.569	4.9948	1	872010		+	53736	633	35832	35847	60930	60930					0.06975898046425755
SGGTSLSFLVL	11	Unmodified	_SGGTSLSFLVL_					0	0	0		ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2;chr6:158093104-158093888|18|12.06|0.72|4.06|+|ENST00000640338|SYNJ2,SYNJ2	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.800537109375	2	540.800414	1079.58628	-1.3732	-0.00074265	1.5797	0.00085428	0.20642	0.00011163	540.8010666157255	73.124	0.62915	73.512	73.168	73.797	0.3878					33	15	3	0	0	0	0.36477	1	8191	8191		62.107	3.3255	1	1087500			53737	1394;471	35833	35848	60931	60931					0.04966592411892634
SGGVPSIWLLL	11	Unmodified	_SGGVPSIWLLL_					0	0	0			REV__ENST00000582835.1_1_2:95558343-95558376:-|nuORF	REV__ENST00000582835.1_1_2:95558343-95558376:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.2540283203125	2	571.334424	1140.6543	-1.1301	-0.00064564	-1.5686	-0.00089619	-2.6986	-0.0015418	571.3328319005946	72.349	1.2463	72.735	72.084	73.33	0.38581					46	29	3	0	0	0	0.17478	1	8120	8120		32.812	0	1	199300	+		53738	29062	35834	35849	60932	60932					0.08959462062580315
SGGWCPPPAP	10	Unmodified	_SGGWCPPPAP_					0	0	0		chr22:25455840-25456158|20|12.8|0.63|4.34|+|2|CRYBB2P1,CRYBB2P1|1	chr22:25455840-25456158|20|12.8|0.63|4.34|+|2|CRYBB2P1,CRYBB2P1|1	chr22:25455840-25456158|20|12.8|0.63|4.34|+|2|CRYBB2P1,CRYBB2P1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.71826171875	2	484.71837	967.422187	1.6171	0.00078385	-1.8628	-0.00090295	-0.2457	-0.00011909	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.81018	1	11522	11522		38.806	3.1879	1	7541600			53739	380	35835	35850	60933	60933					-0.06282703559850233
SGGWKAQVV	9	Unmodified	_SGGWKAQVV_					0	0	0		ENSG00000092295|ENST00000206765|TGM1	ENSG00000092295|ENST00000206765|TGM1	ENSG00000092295|ENST00000206765|TGM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2529296875	2	466.253434	930.492316	-1.0712	-0.00049944	1.8894	0.00088094	0.81821	0.00038149	466.2541904327881	60.586	1.2512	60.686	59.935	61.186	0.10082					87	49	2	0	0	0	0.78058	1	5246	5246		30.504	5.0535	1	202870			53740	1696	35836	35851	60934	60934					0.024289181002814075
SGHVIVVVPLS	11	Unmodified	_SGHVIVVVPLS_					0	0	0			REV__nc|ENSG00000126561|P42229-2|STAT5A	REV__nc|ENSG00000126561|P42229-2|STAT5A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8303833007812	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.70737	1	8661	8661		30.318	1.1477	1	1181400	+		53741	18705	35837	35852	60935	60935					0.10094577919812764
SGHVIVVVPLS	11	Unmodified	_SGHVIVVVPLS_					0	0	0			REV__nc|ENSG00000126561|P42229-2|STAT5A	REV__nc|ENSG00000126561|P42229-2|STAT5A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8301391601562	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.66929	1	8814	8814		36.447	3.6343	1	3935500	+		53742	18705	35837	35852	60936	60936					0.10094577919812764
SGHVIVVVPLS	11	Unmodified	_SGHVIVVVPLS_					0	0	0			REV__nc|ENSG00000126561|P42229-2|STAT5A	REV__nc|ENSG00000126561|P42229-2|STAT5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8299560546875	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.65746	2	9285	9285;9334		37.812	4.9991	1	5219600	+		53743	18705	35837	35852	60937;60938	60937					0.10094577919812764
SGICKILA	8	Unmodified	_SGICKILA_					0	0	0		ENST00000380523.8_1_X:14038468-14044204:-|nuORF;ENST00000398355.7_1_X:14038468-14047965:-|nuORF	ENST00000380523.8_1_X:14038468-14044204:-|nuORF	ENST00000380523.8_1_X:14038468-14044204:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.7368469238281	2	402.736031	803.45751	0.18733	7.5443E-05	3.2078	0.0012919	3.3952	0.0013674	402.7372818018324	41.203	1.3998	41.172	40.802	42.202	-0.030991					69	36	4	0	0	0	0.87479	1	2991	2991		30.504	5.0535	1	919550			53744	10922	35838	35853	60939	60939					0.04791958967962273
SGIRGPVPP	9	Unmodified	_SGIRGPVPP_					0	0	0		ENST00000596403.1_1_19:38694578-38696877:+|nuORF	ENST00000596403.1_1_19:38694578-38696877:+|nuORF	ENST00000596403.1_1_19:38694578-38696877:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.25537109375	2	440.255977	878.497401	0.25826	0.0001137	-1.4885	-0.00065531	-1.2302	-0.00054161	440.2551628141125	62.575	1.3839	63.129	62.257	63.641	0.5545					72	31	3	0	0	0	0.7932	1	6792	6792		21.96	1.4781	1	690880			53745	14336	35839	35854	60940	60940					0.05329221962892916
SGKKKISKA	9	Unmodified	_SGKKKISKA_					0	0	0		ENSG00000015285|ENST00000376701|WAS	ENSG00000015285|ENST00000376701|WAS	ENSG00000015285|ENST00000376701|WAS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.80535888671875	2	473.805834	945.597115	0.82894	0.00039275	-1.3959	-0.00066137	-0.56694	-0.00026862	473.8049886998189	19.103	0.74976	18.634	18.459	19.209	-0.46967					34	16	3	0	0	0	0.7932	1	471	471		24.519	6.1948	1	198210			53746	822	35840	35855	60941	60941					0.122140395768497
SGKKKISKA	9	Unmodified	_SGKKKISKA_					0	0	0		ENSG00000015285|ENST00000376701|WAS	ENSG00000015285|ENST00000376701|WAS	ENSG00000015285|ENST00000376701|WAS	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	473.805834	945.597115	-1.0343	-0.00049008	-1.0218	-0.00048415	-2.0562	-0.00097423	473.8052007693904	18.48	0.25229	18.524	18.399	18.651	0.044048	-0.054804	0.00029781	NaN	24.519	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52421			53747	822	35840	35855							0.122140395768497
SGKPLLPFSTG	11	Unmodified	_SGKPLLPFSTG_					0	0	0		ENSG00000147485|ENST00000356297|PXDNL;nc|ENSG00000147485|A1KZ92-2|PXDNL;nc|ENSG00000147485|A1KZ92-3|PXDNL	ENSG00000147485|ENST00000356297|PXDNL	ENSG00000147485|ENST00000356297|PXDNL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3063354492188	2	552.308406	1102.60226	-0.59209	-0.00032702	-2.8479	-0.0015729	-3.44	-0.0018999	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.67778	2	9176	9176;9188		35.152	1.0262	1	1102700			53748	4908	35841	35856	60942;60943	60942					0.05506298648788288
SGKSRKKGL	9	Unmodified	_SGKSRKKGL_					0	0	0			REV__ENST00000567728.1_1_16:50770637-50774611:-|nuORF	REV__ENST00000567728.1_1_16:50770637-50774611:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.801025390625	2	480.801083	959.587613	-1.6775	-0.00080655	1.1222	0.00053954	-0.55533	-0.00026701	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.7932	1	9843	9843		21.96	1.4781	1	17379000	+		53749	28884	35842	35857	60944	60944					0.10620271291338668
SGLIFAII	8	Unmodified	_SGLIFAII_					0	0	0		ENSG00000175143|ENST00000642005|OR2T1;nc|ENSG00000175143|O43869|OR2T1	ENSG00000175143|ENST00000642005|OR2T1	ENSG00000175143|ENST00000642005|OR2T1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2578430175781	2	417.260197	832.50584	-0.38397	-0.00016022	-3.5679	-0.0014888	-3.9519	-0.001649	417.2585749889359	22.175	2.752	22.117	21.499	24.251	-0.05867					139	87	2	0	0	0	0.86791	1	700	700		28.254	0	1	87379			53750	6992	35843	35858	60945	60945					0.08288775879520927
SGLISVVCFV	10	Unmodified	_SGLISVVCFV_					0	0	0		ENSG00000276240|ENST00000641792|OR4E1	ENSG00000276240|ENST00000641792|OR4E1	ENSG00000276240|ENST00000641792|OR4E1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2830810546875	2	512.280803	1022.54705	-0.3427	-0.00017556	1.3496	0.0006914	1.0069	0.00051584	512.2814243636773	86.125	3.8841	86.31	84.842	88.726	0.18523					170	91	2	0	0	0	0.84112	1	8456	8456		37.159	6.6555	1	381930			53751	9012	35844	35859	60946	60946					0.036681688566886805
SGLLAHQV	8	Unmodified	_SGLLAHQV_					0	0	0			REV__ENST00000228606.8_1_12:58158304-58160873:-|nuORF	REV__ENST00000228606.8_1_12:58158304-58160873:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7669372558594	2	412.734877	823.455202	1.2681	0.0005234	-0.23194	-9.5731E-05	1.0362	0.00042767	412.73467283370024	36.663	0.69823	36.944	36.724	37.422	0.28173					21	16	2	0	0	0	0.4196	1	2881	2881		30.504	0	1	51952	+		53752	24186	35845	35860	60947	60947					0.036412465545254236
SGLLATLRGGG	11	Unmodified	_SGLLATLRGGG_					0	0	0			REV__ENST00000361171.7_1_9:129266081-129266318:+|nuORF	REV__ENST00000361171.7_1_9:129266081-129266318:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2903747558594	2	501.290548	1000.56654	-0.9424	-0.00047241	0.84818	0.00042518	-0.094216	-4.7229E-05	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.6493	1	8352	8352		38.754	1.5945	1	6939200	+		53753	25493	35846	35861	60948	60948					0.06628261191815454
SGLLCEAI	8	Unmodified	_SGLLCEAI_					0	0	0			REV__ENSG00000168263|ENST00000382082|KCNV2	REV__ENSG00000168263|ENST00000382082|KCNV2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2088317871094	2	403.209847	804.40514	0.59952	0.00024173	-2.8003	-0.0011291	-2.2008	-0.00088739	403.20865750603866	85.732	1.8224	85.881	85.428	87.25	0.14857					100	42	4	0	0	0	0.85277	1	8404	8404		25.45	1.2474	1	1321000	+		53754	21473	35847	35862	60949	60949					-0.004886241656663515
SGLLLLVTHGL	11	Unmodified	_SGLLLLVTHGL_					0	0	0			REV__ENST00000566228.5_1_16:12662707-12662776:+|nuORF	REV__ENST00000566228.5_1_16:12662707-12662776:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.8458862304688	2	561.847699	1121.68084	-0.47672	-0.00026785	-2.9318	-0.0016472	-3.4085	-0.0019151	561.8459227560618	97.238	1.868	97.238	96.81	98.678	0					92	44	4	0	0	0	0.65746	1	9726	9726		37.812	16.865	1	643900	+		53755	28865	35848	35863	60950	60950					0.12487150953893433
SGLLLLVTHGL	11	Unmodified	_SGLLLLVTHGL_					0	0	0			REV__ENST00000566228.5_1_16:12662707-12662776:+|nuORF	REV__ENST00000566228.5_1_16:12662707-12662776:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.8460083007812	2	561.847699	1121.68084	0.41142	0.00023115	-3.9205	-0.0022027	-3.509	-0.0019715	561.8453227320805	96.693	1.8248	96.924	96.437	98.262	0.23103					107	42	4	0	0	0	0.5603	1	9971	9971		47.657	12.039	1	1323100	+		53756	28865	35848	35863	60951	60951					0.12487150953893433
SGLLLLVTHGL	11	Unmodified	_SGLLLLVTHGL_					0	0	0			REV__ENST00000566228.5_1_16:12662707-12662776:+|nuORF	REV__ENST00000566228.5_1_16:12662707-12662776:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	561.8455810546875	2	561.847699	1121.68084	0.82777	0.00046508	-4.3751	-0.0024581	-3.5473	-0.001993	561.8450907704936	96.8	1.7474	96.963	96.403	98.15	0.16317					98	40	4	0	0	0	0.58425	2	9976	9976;9988		45.972	14.017	1	906900	+		53757	28865	35848	35863	60952;60953	60952					0.12487150953893433
SGLLLPEL	8	Unmodified	_SGLLLPEL_					0	0	0		ENST00000518940.5_1_8:103855961-103870248:-|nuORF	ENST00000518940.5_1_8:103855961-103870248:-|nuORF	ENST00000518940.5_1_8:103855961-103870248:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.2542419433594	2	421.255111	840.49567	-1.2322	-0.00051907	-1.5244	-0.00064217	-2.7566	-0.0011612	421.25432904467385	84.477	1.3086	84.477	83.963	85.271	0					69	29	3	0	0	0	0.79929	1	7981	7981		18.324	0	1	450410			53758	13125	35849	35864	60954	60954					0.06904168154278523
SGLLLPEL	8	Unmodified	_SGLLLPEL_					0	0	0		ENST00000518940.5_1_8:103855961-103870248:-|nuORF	ENST00000518940.5_1_8:103855961-103870248:-|nuORF	ENST00000518940.5_1_8:103855961-103870248:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.2538146972656	2	421.255111	840.49567	0.67687	0.00028514	-3.3489	-0.0014107	-2.672	-0.0011256	421.25351698068755	84.328	1.4775	84.259	83.718	85.196	-0.069313					81	33	3	0	0	0	0.84341	1	8605	8605		24.203	0	1	949480			53759	13125	35849	35864	60955	60955					0.06904168154278523
SGLLYPVALL	10	Unmodified	_SGLLYPVALL_					0	0	0		nc|ENSG00000163915|Q96M15|IGF2BP2-AS1	nc|ENSG00000163915|Q96M15|IGF2BP2-AS1	nc|ENSG00000163915|Q96M15|IGF2BP2-AS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.318243	1044.62193	1.13	0.00059137	-4.3202	-0.0022608	-3.1901	-0.0016694	523.3159183159206	88.169	0.12167	88.219	88.116	88.237	0.050415					4	2	2	0	0	0	0.37624	1	9036	9036		30.504	6.9809	1	79399			53760	15053	35850	35865	60956	60956					0.10140674659578508
SGLPLVNIRKR	11	Unmodified	_SGLPLVNIRKR_					0	0	0			REV__nc|ENSG00000126522|P04424-2|ASL	REV__nc|ENSG00000126522|P04424-2|ASL	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.2660827636719	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.882	1	49.912	49.412	50.412	0.029629								0	0	0	0.56276	1	3886	3886		21.032	1.0018	1		+		53761	18704	35851	35866	60957	60957					0.16172138233696387
SGLPLVNIRKR	11	Unmodified	_SGLPLVNIRKR_					0	0	0			REV__nc|ENSG00000126522|P04424-2|ASL	REV__nc|ENSG00000126522|P04424-2|ASL	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.26666259765625	3	418.266456	1251.77754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.014	1	50.044	49.544	50.544	0.029629								0	0	0	0.56276	1	3904	3904		22.562	4.0305	1		+		53762	18704	35851	35866	60958	60958					0.16172138233696387
SGLRKRRRRGW	11	Unmodified	_SGLRKRRRRGW_					0	0	0		ENST00000480582.1_1_7:150555040-150557681:+|nuORF	ENST00000480582.1_1_7:150555040-150557681:+|nuORF	ENST00000480582.1_1_7:150555040-150557681:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62493896484375	3	476.623748	1426.84942	-1.6911	-0.000806	1.5998	0.0007625	-0.09126	-4.3497E-05	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.78391	1	12469	12469		14.694	2.487	1	2577100			53763	12443	35852	35867	60959	60959					0.1530649043077119
SGLSAGMSII	10	Unmodified	_SGLSAGMSII_					0	0	0		ENSG00000146409|ENST00000275227|SLC18B1	ENSG00000146409|ENST00000275227|SLC18B1	ENSG00000146409|ENST00000275227|SLC18B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.24334716796875	2	468.24696	934.479368	-1.6996	-0.00079582	-2.3355	-0.0010936	-4.0351	-0.0018894	468.24580139904907	47.359	0.58546	47.359	46.956	47.541	0					29	21	2	0	0	0	0.5766	1	3622	3622		51.335	1.3109	1	138620			53764	4843	35853	35868	60960	60960					0.00950718925878391
SGLSGGRKLSA	11	Unmodified	_SGLSGGRKLSA_					0	0	0		ENST00000382882.7_2_4:2011010-2011436:-|nuORF	ENST00000382882.7_2_4:2011010-2011436:-|nuORF	ENST00000382882.7_2_4:2011010-2011436:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7935791015625	2	516.793455	1031.57236	-1.5587	-0.00080555	1.5478	0.00079991	-0.010905	-5.6357E-06	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.36477	1	8634	8634		62.107	21.535	1	755180			53765	10978	35854	35869	60961	60961					0.05783359703491442
SGLSIKAK	8	Unmodified	_SGLSIKAK_					0	0	0			REV__ENSG00000135837|ENST00000367607|CEP350	REV__ENSG00000135837|ENST00000367607|CEP350	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.2530517578125	2	402.252903	802.491253	0.45654	0.00018364	-1.5775	-0.00063455	-1.1209	-0.0004509	402.25224579031755	20.284	0.3759	20.263	20.105	20.48	-0.020922					36	18	3	0	0	0	0.8347	1	473	473		23.042	5.6775	1	136790	+		53766	19256	35855	35870	60962	60962					0.0821070373136763
SGLTSLKK	8	Unmodified	_SGLTSLKK_					0	0	0		nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8;ENSG00000198000|ENST00000442668|NOL8	nc|ENSG00000198000|Q76FK4-2|NOL8	nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.25750732421875	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.83058	1	510	510		12.959	2.0936	1	867930			53767	8225	35856	35871	60963	60963					0.07886686385802477
SGLVWVALL	9	Unmodified	_SGLVWVALL_					0	0	0		ENSG00000129467|ENST00000418030|ADCY4;ENST00000555591.1_1_14:24801652-24802170:-|nuORF;ENST00000557099.2_1_14:24801726-24803858:-|nuORF	ENSG00000129467|ENST00000418030|ADCY4	ENSG00000129467|ENST00000418030|ADCY4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27740478515625	2	479.292028	956.569503	-0.80879	-0.00038765	-2.6701	-0.0012798	-3.4789	-0.0016674	479.290551861053	84.073	0.47902	84.132	83.849	84.328	0.05925					15	10	2	0	0	0	0.20789	1	8483	8483		33.516	18.851	1	104360			53768	3589	35857	35872	60964	60964					0.08948136316621458
SGNLPKGKP	9	Unmodified	_SGNLPKGKP_					0	0	0			REV__ENSG00000147324|ENST00000276282|MFHAS1	REV__ENSG00000147324|ENST00000276282|MFHAS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2601013183594	2	449.261259	896.507966	-1.3114	-0.00058915	-0.12706	-5.7085E-05	-1.4384	-0.00064623	449.26102323069586	70.48	0.6918	70.615	70.329	71.021	0.13506					54	33	2	0	0	0	0.77244	1	6403	6403		32.812	5.7651	1	313860	+		53769	20065	35858	35873	60965	60965					0.05557204617332445
SGNTVSIKSLK	11	Unmodified	_SGNTVSIKSLK_					0	0	0		nc|ENSG00000163600|Q9Y6W8-2|ICOS;ENSG00000163600|ENST00000316386|ICOS	nc|ENSG00000163600|Q9Y6W8-2|ICOS	nc|ENSG00000163600|Q9Y6W8-2|ICOS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297119140625	2	567.32987	1132.64519	-0.51077	-0.00028978	0.47287	0.00026828	-0.037898	-2.1501E-05	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.72739	1	9406	9406		27.047	0.98393	1	11042000			53770	5831	35859	35874	60966	60966					0.08417068706239661
SGPAAPAQSY	10	Unmodified	_SGPAAPAQSY_					0	0	0		nc|ENSG00000154133|Q8WZ75-3|ROBO4;nc|ENSG00000154133|Q8WZ75-2|ROBO4;ENSG00000154133|ENST00000306534|ROBO4	nc|ENSG00000154133|Q8WZ75-3|ROBO4	nc|ENSG00000154133|Q8WZ75-3|ROBO4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.2332763671875	2	474.724707	947.43486	-1.2875	-0.0006112	1.5979	0.00075858	0.31045	0.00014738	474.7252330205125	39.821	0.73237	39.777	39.493	40.226	-0.043694					36	16	3	0	0	0	0.37624	1	2883	2883		72.879	20.58	1	254600			53771	5254	35860	35875	60967	60967					-0.04095968895956048
SGPELPCH	8	Unmodified	_SGPELPCH_					0	0	0		ENST00000377792.3_2_9:37486484-37486616:+|nuORF	ENST00000377792.3_2_9:37486484-37486616:+|nuORF	ENST00000377792.3_2_9:37486484-37486616:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.1907043457031	2	420.189445	838.364338	1.7374	0.00073004	2.0855	0.00087629	3.8229	0.0016063	420.1905572526673	93.928	4.8779	94.369	91.96	96.838	0.44099					240	120	3	0	0	0	0.85277	1	11023	11023		25.45	0	1	4179400			53772	10846	35861	35876	60968	60968					-0.061309654852720996
SGPGRLKKT	9	Unmodified	_SGPGRLKKT_					0	0	0		ENSG00000184675|ENST00000374869|AMER1;nc|ENSG00000184675|Q5JTC6-2|AMER1	ENSG00000184675|ENST00000374869|AMER1	ENSG00000184675|ENST00000374869|AMER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.286865234375	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.7932	1	12660	12660		25.574	2.5316	1	3080300			53773	7637	35862	35877	60969	60969					0.08748582399982752
SGPHPMET	8	Unmodified	_SGPHPMET_					0	0	0			REV__ENSG00000261949|ENST00000610896|GFY	REV__ENSG00000261949|ENST00000610896|GFY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.189208984375	2	428.186903	854.359253	0.13282	5.6873E-05	4.473	0.0019153	4.6058	0.0019722	428.18872922690895	94.107	1.8536	94.542	93.224	95.077	0.43539					86	46	2	0	0	0	0.87064	1	11252	11252		29.15	4.6304	1	1237400	+		53774	15718	35863	35878	60970	60970					-0.0737526934788093
SGPIHHVP	8	Unmodified	_SGPIHHVP_					0	0	0			REV__ENST00000535022.1_1_12:127630221-127630377:-|nuORF	REV__ENST00000535022.1_1_12:127630221-127630377:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2276611328125	2	422.22722	842.439886	-0.188	-7.9378E-05	2.0882	0.00088171	1.9002	0.00080234	422.22800326383765	64.571	1.1453	64.57	64.134	65.279	-0.00078583					74	34	3	0	0	0	0.86791	1	6002	6002		28.254	1.4582	1	496030	+		53775	28376	35864	35879	60971	60971					0.012363797573243573
SGPIHHVP	8	Unmodified	_SGPIHHVP_					0	0	0			REV__ENST00000535022.1_1_12:127630221-127630377:-|nuORF	REV__ENST00000535022.1_1_12:127630221-127630377:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5912780761719	2	422.22722	842.439886	-0.70409	-0.00029729	3.5283	0.0014897	2.8242	0.0011924	422.2285915714052	55.094	0.63006	55.044	54.633	55.263	-0.049274					25	18	2	0	0	0	0.4196	1	4565	4565		26.796	6.3143	1	145570	+		53776	28376	35864	35879	60972	60972					0.012363797573243573
SGPIHHVP	8	Unmodified	_SGPIHHVP_					0	0	0			REV__ENST00000535022.1_1_12:127630221-127630377:-|nuORF	REV__ENST00000535022.1_1_12:127630221-127630377:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	422.22722	842.439886	0.73615	0.00031082	1.0409	0.00043948	1.777	0.0007503	422.22756865248357	54.832	1.4557	55.239	54.948	56.404	0.40663	0.076166	-0.00063586	NaN	26.796	59	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	872870	+		53777	28376	35864	35879							0.012363797573243573
SGPPRPVVA	9	Unmodified	_SGPPRPVVA_					0	0	0		ENST00000436079.1_1_22:21356296-21356413:+|nuORF	ENST00000436079.1_1_22:21356296-21356413:+|nuORF	ENST00000436079.1_1_22:21356296-21356413:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2554626464844	2	440.255977	878.497401	-1.1281	-0.00049663	-0.16476	-7.2535E-05	-1.2928	-0.00056917	440.2557479543984	62.714	1.4312	63.102	62.273	63.704	0.3878					74	32	3	0	0	0	0.7932	1	6768	6768		25.45	2.4077	1	707290			53778	11719	35865	35880	60973	60973					0.05329221962892916
SGPQAPVFEF	10	Unmodified	_SGPQAPVFEF_					0	0	0		ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.7635498046875	2	539.763832	1077.51311	0.74596	0.00040264	-0.87433	-0.00047193	-0.12837	-6.929E-05	539.7632456702203	81.825	0.61378	81.883	81.636	82.25	0.057808					27	13	3	0	0	0	0.76096	1	8157	8157		41.427	2.1738	1	128900			53779	6518	35866	35881	60974	60974					-0.022545363107155936
SGPQSHPT	8	Unmodified	_SGPQSHPT_					0	0	0			REV__nc|ENSG00000205277|Q9UKN1|MUC12	REV__nc|ENSG00000205277|Q9UKN1|MUC12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.6874084472656	2	405.690667	809.366781	0.28187	0.00011435	0.24999	0.00010142	0.53186	0.00021577	405.69069329507295	28.575	0.39734	28.611	28.414	28.811	0.03607					20	11	2	0	0	0	0.4196	1	1367	1367		29.15	0	1	29707	+		53780	30170	35867	35882	60975	60975					-0.04552793755954099
SGPQSHPT	8	Unmodified	_SGPQSHPT_					0	0	0			REV__nc|ENSG00000205277|Q9UKN1|MUC12	REV__nc|ENSG00000205277|Q9UKN1|MUC12	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	405.690667	809.366781	-1.9231	-0.0007802	1.272	0.00051602	-0.65117	-0.00026417	405.69151121695296	28.728	0.32991	28.797	28.635	28.965	0.06868	0.10788	0.0014016	NaN	21.96	20	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37058	+		53781	30170	35867	35882							-0.04552793755954099
SGPQSHPT	8	Unmodified	_SGPQSHPT_					0	0	0			REV__nc|ENSG00000205277|Q9UKN1|MUC12	REV__nc|ENSG00000205277|Q9UKN1|MUC12	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	405.690667	809.366781	0.18732	7.5993E-05	0.4944	0.00020057	0.68171	0.00027656	405.6906729329485	28.531	0.18423	28.553	28.481	28.666	0.021948	-0.13635	0.00077067	NaN	21.96	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29492	+		53782	30170	35867	35882							-0.04552793755954099
SGPVGPRR	8	Unmodified	_SGPVGPRR_					0	0	0			REV__ENST00000393229.3_1_9:135117391-135118432:+|nuORF	REV__ENST00000393229.3_1_9:135117391-135118432:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.23748779296875	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.80706	1	7284	7284		19.36	0	1	2127000	+		53783	26050	35868	35883	60976	60976					0.04243184505889985
SGPWSEGPQ	9	Unmodified	_SGPWSEGPQ_					0	0	0			REV__chr7:135681700-135685522|13|13.85|0.12|6.85|-|2|SLC13A4,SLC13A4|1	REV__chr7:135681700-135685522|13|13.85|0.12|6.85|-|2|SLC13A4,SLC13A4|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2874450683594	2	472.709057	943.40356	1.5419	0.00072887	-4.3931	-0.0020767	-2.8512	-0.0013478	472.7069338766065	97.111	0.60753	97.516	97.259	97.867	0.40498					23	14	2	0	0	0	0.20789	1	11654	11654		10.265	0	1	232230	+		53784	15900	35869	35884	60977	60977					-0.070405419300414
SGQPVQRDVSR	11	Unmodified	_SGQPVQRDVSR_					0	0	0		nc|ENSG00000164078|Q04912-5|MST1R;nc|ENSG00000164078|Q04912-2|MST1R;ENSG00000164078|ENST00000296474|MST1R;nc|ENSG00000164078|Q04912-6|MST1R	nc|ENSG00000164078|Q04912-5|MST1R	nc|ENSG00000164078|Q04912-5|MST1R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	410.2181701660156	3	410.217942	1227.632	-0.40522	-0.00016623	1.9272	0.00079057	1.522	0.00062435	410.21866762821935	16.847	0.32242	16.768	16.659	16.982	-0.079054					24	10	3	0	0	0	0.69071	1	152	152		33.039	1.9713	1	167510			53785	5912	35870	35885	60978	60978					0.027286306468340626
SGRALLPSP	9	Unmodified	_SGRALLPSP_					0	0	0			REV__ENST00000583454.1_1_17:73512940-73513526:+|nuORF	REV__ENST00000583454.1_1_17:73512940-73513526:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2602844238281	2	449.261259	896.507966	0.057954	2.6037E-05	-1.3536	-0.00060812	-1.2956	-0.00058208	449.2605008010548	66.1	1.0485	66.652	66.2	67.248	0.5526					65	29	3	0	0	0	0.73802	1	7234	7234		37.812	6.2817	1	957500	+		53786	29071	35871	35886	60979	60979					0.055572046173210765
SGRALLPSP	9	Unmodified	_SGRALLPSP_					0	0	0			REV__ENST00000583454.1_1_17:73512940-73513526:+|nuORF	REV__ENST00000583454.1_1_17:73512940-73513526:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2608337402344	2	449.261259	896.507966	-0.10987	-4.936E-05	-1.2586	-0.00056544	-1.3685	-0.0006148	449.26053823357574	68.09	1.1232	68.638	68.16	69.283	0.54819					61	26	4	0	0	0	0.73802	1	7490	7490		37.812	6.2817	1	1909000	+		53787	29071	35871	35886	60980	60980					0.055572046173210765
SGRALLPSP	9	Unmodified	_SGRALLPSP_					0	0	0			REV__ENST00000583454.1_1_17:73512940-73513526:+|nuORF	REV__ENST00000583454.1_1_17:73512940-73513526:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	449.261259	896.507966	-0.46419	-0.00020854	-0.9913	-0.00044535	-1.4555	-0.0006539	449.2604495629377	66.337	0.22874	66.302	66.206	66.435	-0.035217	-0.20075	0.00017189	NaN	37.812	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81717	+		53788	29071	35871	35886							0.055572046173210765
SGRGKPCV	8	Unmodified	_SGRGKPCV_					0	0	0		ENST00000256935.12_1_5:169509883-169510066:+|nuORF	ENST00000256935.12_1_5:169509883-169510066:+|nuORF	ENST00000256935.12_1_5:169509883-169510066:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	402.21197509765625	2	402.213255	802.411957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.757	1	74.757	74.257	75.257	0								0	0	0	0.30079	1	6749	6749		20.947	1.587	1				53789	9344	35872	35887	60981	60981					0.002847335055776057
SGRGTPKGKT	10	Unmodified	_SGRGTPKGKT_					0	0	0		ENST00000600689.1_1_19:18976320-18976969:+|nuORF	ENST00000600689.1_1_19:18976320-18976969:+|nuORF	ENST00000600689.1_1_19:18976320-18976969:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.78045654296875	2	494.780348	987.546142	-0.85772	-0.00042438	0.93735	0.00046378	0.07963	3.9399E-05	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.86698	1	8781	8781		28.081	2.5074	1	737700			53790	14382	35873	35888	60982	60982					0.051870905319901794
SGRKQPPAS	9	Unmodified	_SGRKQPPAS_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2536315917969	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.58668	5	8014	7918;7930;7967;8014;8051		47.657	10.205	1	946850			53791	7058	35874	35889	60983;60984;60985;60986;60987	60986					0.027191324691784757
SGRKQPPAS	9	Unmodified	_SGRKQPPAS_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2539367675781	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.64555	6	8380	8297;8344;8355;8380;8416;8512		44.377	10.456	1	1449300			53792	7058	35874	35889	60988;60989;60990;60991;60992;60993	60991					0.027191324691784757
SGRKQPPAS	9	Unmodified	_SGRKQPPAS_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2537536621094	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.54908	9	8501	8501;8597;8621;8693;8706;8743;8755;8767;8815		49.536	8.7579	1	1578600			53793	7058	35874	35889	60994;60995;60996;60997;60998;60999;61000;61001;61002	60994					0.027191324691784757
SGRKQPPAS	9	Unmodified	_SGRKQPPAS_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2540588378906	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.36616	5	8454	8394;8418;8454;8587;8702		60.118	16.001	1	1673200			53794	7058	35874	35889	61003;61004;61005;61006;61007	61005					0.027191324691784757
SGRKQPPAS	9	Unmodified	_SGRKQPPAS_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2537536621094	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.64555	4	8240	8086;8180;8240;8363		44.377	5.1244	1	1482000			53795	7058	35874	35889	61008;61009;61010;61011	61010					0.027191324691784757
SGRKQPPAS	9	Unmodified	_SGRKQPPAS_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2537536621094	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.39367	4	8195	8002;8135;8159;8195		58.23	14.113	1	1324500			53796	7058	35874	35889	61012;61013;61014;61015	61015					0.027191324691784757
SGRKQPPAS	9	Unmodified	_SGRKQPPAS_					0	0	0		ENSG00000176155|ENST00000694881|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;nc|ENSG00000176155|Q2TAC2-2|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	ENSG00000176155|ENST00000694881|CCDC57	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2534484863281	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.64555	1	9744	9744		44.377	5.1244	1	1215000			53797	7058	35874	35889	61016	61016					0.027191324691784757
SGRKWHKFKRR	11	Unmodified	_SGRKWHKFKRR_					0	0	0			REV__ENST00000368891.9_1_10:124713711-124713801:-|nuORF	REV__ENST00000368891.9_1_10:124713711-124713801:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	495.95855712890625	3	495.960249	1484.85892	-1.6281	-0.00080749	-0.50996	-0.00025292	-2.1381	-0.0010604	495.95953197702175	103.56	1.6204	103.67	103.15	104.77	0.11495					123	40	4	0	0	0	0.76892	1	10893	10893		17.833	0.6664	1	573460	+		53798	25610	35875	35890	61017	61017					0.1358825871625413
SGRLTFPVPPE	11	Unmodified	_SGRLTFPVPPE_					0	0	0		nc|ENSG00000110697|O00562-2|PITPNM1;ENSG00000110697|ENST00000356404|PITPNM1;ENST00000526450.1_1_11:67261391-67262403:-|nuORF;ENST00000527370.5_1_11:67259506-67263940:-|nuORF	nc|ENSG00000110697|O00562-2|PITPNM1	nc|ENSG00000110697|O00562-2|PITPNM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	600.323974609375	2	600.324588	1198.63462	-0.31424	-0.00018865	-0.8445	-0.00050698	-1.1587	-0.00069562	600.3239232802032	111.52	1.0307	111.55	111.06	112.09	0.030388					113	40	4	0	0	0	0.7342	1	12239	12239		25.574	2.0514	1	160730			53799	2534	35876	35891	61018	61018					0.043250860517900946
SGRRASRPTRA	11	Unmodified	_SGRRASRPTRA_					0	0	0			REV__ENST00000321276.7_1_2:223289259-223339308:+|nuORF	REV__ENST00000321276.7_1_2:223289259-223339308:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5648193359375	3	405.565676	1213.6752	-1.8662	-0.00075687	-0.45566	-0.0001848	-2.3219	-0.00094167	405.5653987385133	59.885	1.7634	59.979	59.006	60.769	0.094059					140	62	3	0	0	0	0.75779	1	5132	5132		20.315	0.28454	1	349460	+		53800	25007	35877	35892	61019	61019					0.0769086521479494
SGRRPPVG	8	Unmodified	_SGRRPPVG_					0	0	0		ENST00000449944.5_1_22:38005063-38010197:+|nuORF	ENST00000449944.5_1_22:38005063-38010197:+|nuORF	ENST00000449944.5_1_22:38005063-38010197:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2380065917969	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.86791	1	7620	7620		28.254	1.4582	1	1747900			53801	11885	35878	35893	61020	61020					0.04243184505901354
SGRRPPVG	8	Unmodified	_SGRRPPVG_					0	0	0		ENST00000449944.5_1_22:38005063-38010197:+|nuORF	ENST00000449944.5_1_22:38005063-38010197:+|nuORF	ENST00000449944.5_1_22:38005063-38010197:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2381896972656	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.88915	1	7457	7457		35.201	1.6851	1	2127000			53802	11885	35878	35893	61021	61021					0.04243184505901354
SGRRPPVG	8	Unmodified	_SGRRPPVG_					0	0	0		ENST00000449944.5_1_22:38005063-38010197:+|nuORF	ENST00000449944.5_1_22:38005063-38010197:+|nuORF	ENST00000449944.5_1_22:38005063-38010197:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2381286621094	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.86288	2	7124	7124;7336		28.254	5.2118	1	1692300			53803	11885	35878	35893	61022;61023	61022					0.04243184505901354
SGRRPPVG	8	Unmodified	_SGRRPPVG_					0	0	0		ENST00000449944.5_1_22:38005063-38010197:+|nuORF	ENST00000449944.5_1_22:38005063-38010197:+|nuORF	ENST00000449944.5_1_22:38005063-38010197:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.238037109375	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.89962	1	7309	7309		38.806	1.647	1	1341700			53804	11885	35878	35893	61024	61024					0.04243184505901354
SGRSGQMYINL	11	Unmodified	_SGRSGQMYINL_					0	0	0			REV__ENST00000506517.5_1_4:143326449-143346376:-|nuORF	REV__ENST00000506517.5_1_4:143326449-143346376:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	613.3057250976562	2	613.303329	1224.59211	-0.38551	-0.00023644	-1.526	-0.00093592	-1.9115	-0.0011724	613.3022938268982	78.07	0.44775	78.126	77.934	78.382	0.056114					30	17	2	0	0	0	0.67778	1	7569	7569		35.152	1.2304	1	101700	+		53805	27892	35879	35894	61025	61025					-0.011206323480564606
SGRTGFSN	8	Unmodified	_SGRTGFSN_					0	0	0		nc|ENSG00000134249|Q9UKF2-2|ADAM30;ENSG00000134249|ENST00000369400|ADAM30	nc|ENSG00000134249|Q9UKF2-2|ADAM30	nc|ENSG00000134249|Q9UKF2-2|ADAM30	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1940612792969	2	413.196116	824.37768	-1.8302	-0.00075625	-4.0037	-0.0016543	-5.834	-0.0024106	413.19437338858427	78.719	2.8895	78.846	78.411	81.3	0.12695					158	87	2	0	0	0	0.88601	1	7503	7503		34.173	1.3601	1	956620			53806	3918	35880	35895	61026	61026					-0.0415339138166928
SGRTGFSN	8	Unmodified	_SGRTGFSN_					0	0	0		nc|ENSG00000134249|Q9UKF2-2|ADAM30;ENSG00000134249|ENST00000369400|ADAM30	nc|ENSG00000134249|Q9UKF2-2|ADAM30	nc|ENSG00000134249|Q9UKF2-2|ADAM30	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.19415283203125	2	413.196116	824.37768	-1.6019	-0.00066191	-4.2995	-0.0017765	-5.9014	-0.0024384	413.19424248280797	78.75	3.0447	78.844	78.417	81.462	0.0942					181	92	2	0	0	0	0.93786	1	7419	7419		53.351	0	1	856750			53807	3918	35880	35895	61027	61027					-0.0415339138166928
SGRVLTHGG	9	Unmodified	_SGRVLTHGG_					0	0	0		ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2408752441406	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.78983	1	7557	7557		27.882	1.1893	1	716910			53808	12526	35881	35896	61028	61028					0.021228632976999506
SGRVLTHGG	9	Unmodified	_SGRVLTHGG_					0	0	0		ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2403869628906	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.51307	7	8190	7988;8034;8082;8119;8167;8190;8226		51.335	10.557	1	1068200			53809	12526	35881	35896	61029;61030;61031;61032;61033;61034;61035	61034					0.021228632976999506
SGRVLTHGG	9	Unmodified	_SGRVLTHGG_					0	0	0		ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.24072265625	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.51307	4	8338	8208;8338;8361;8435		51.335	12.529	1	1238700			53810	12526	35881	35896	61036;61037;61038;61039	61037					0.021228632976999506
SGRVLTHGG	9	Unmodified	_SGRVLTHGG_					0	0	0		ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2405090332031	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.69624	2	8234	8137;8234		40.778	6.6056	1	1244000			53811	12526	35881	35896	61040;61041	61041					0.021228632976999506
SGRVLTHGG	9	Unmodified	_SGRVLTHGG_					0	0	0		ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2406005859375	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.51307	3	7933	7722;7888;7933		51.335	8.861	1	1219900			53812	12526	35881	35896	61042;61043;61044	61044					0.021228632976999506
SGRVLTHGG	9	Unmodified	_SGRVLTHGG_					0	0	0		ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2408142089844	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.51307	2	7780	7780;7804		51.335	0	1	1094000			53813	12526	35881	35896	61045;61046	61045					0.021228632976999506
SGRVLTHGG	9	Unmodified	_SGRVLTHGG_					0	0	0		ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	ENST00000483937.5_1_9:128233424-128233748:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24078369140625	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.69624	3	7698	7698;7719;7860		40.778	5.1599	1	968500			53814	12526	35881	35896	61047;61048;61049	61047					0.021228632976999506
SGSARRVL	8	Unmodified	_SGSARRVL_					0	0	0			REV__ENST00000526104.5_2_11:207946-208069:+|nuORF	REV__ENST00000526104.5_2_11:207946-208069:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.2532958984375	2	423.251226	844.487899	0.42329	0.00017916	3.1483	0.0013325	3.5716	0.0015117	423.25240039255044	78.017	0.82336	78.423	78.101	78.924	0.40531					33	19	3	0	0	0	0.91982	1	8898	8898		45.972	9.5255	1	435290	+		53815	28194	35882	35897	61050	61050					0.05943453677366506
SGSARRVL	8	Unmodified	_SGSARRVL_					0	0	0			REV__ENST00000526104.5_2_11:207946-208069:+|nuORF	REV__ENST00000526104.5_2_11:207946-208069:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	423.251226	844.487899	0.42329	0.00017916	3.1483	0.0013325	3.5716	0.0015117	423.25240039255044	78.017	0.82336	78.423	78.101	78.924	0.40531	-0.018531	-8.5996E-05	NaN	45.972	33	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	435290	+		53816	28194	35882	35897							0.05943453677366506
SGSARRVL	8	Unmodified	_SGSARRVL_					0	0	0			REV__ENST00000526104.5_2_11:207946-208069:+|nuORF	REV__ENST00000526104.5_2_11:207946-208069:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	423.251226	844.487899	0.063317	2.6799E-05	3.4996	0.0014812	3.563	0.001508	423.25250815741055	77.896	0.61203	78.46	78.214	78.826	0.56332	0.018531	0.00021139	NaN	45.972	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	426140	+		53817	28194	35882	35897							0.05943453677366506
SGSGLLVLKFV	11	Unmodified	_SGSGLLVLKFV_					0	0	0			REV__ENST00000416106.1_1_2:238494070-238499247:-|nuORF	REV__ENST00000416106.1_1_2:238494070-238499247:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3388671875	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.76699	2	12691	12691;12950		18.262	3.3972	1	4071000	+		53818	18620	35883	35898	61051;61052	61051					0.11535748579603933
SGSLKAIK	8	Unmodified	_SGSLKAIK_					0	0	0		nc|ENSG00000131653|Q6Q0C0-2|TRAF7;ENSG00000131653|ENST00000326181|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.2513732910156	2	402.252903	802.491253	-1.9384	-0.00077971	1.1648	0.00046854	-0.77356	-0.00031117	402.2533006002881	19.636	0.29034	19.68	19.511	19.802	0.043747					24	14	2	0	0	0	0.7961	1	432	432		17.365	0.66	1	74650			53819	3742	35884	35899	61053	61053					0.0821070373136763
SGSLKAIK	8	Unmodified	_SGSLKAIK_					0	0	0		nc|ENSG00000131653|Q6Q0C0-2|TRAF7;ENSG00000131653|ENST00000326181|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	402.252903	802.491253	0.90265	0.00036309	-1.7441	-0.00070156	-0.84143	-0.00033847	402.25211079060824	19.584	0.27178	19.655	19.54	19.812	0.071127	-0.10927	-0.00088314	NaN	17.365	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25558			53820	3742	35884	35899							0.0821070373136763
SGSLKAIK	8	Unmodified	_SGSLKAIK_					0	0	0		nc|ENSG00000131653|Q6Q0C0-2|TRAF7;ENSG00000131653|ENST00000326181|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	402.252903	802.491253	-0.39961	-0.00016075	0.25488	0.00010253	-0.14473	-5.8219E-05	402.2528915307924	19.857	0.44082	19.787	19.472	19.913	-0.069735	0.023085	0.00072504	NaN	17.365	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56210			53821	3742	35884	35899							0.0821070373136763
SGSLKAIK	8	Unmodified	_SGSLKAIK_					0	0	0		nc|ENSG00000131653|Q6Q0C0-2|TRAF7;ENSG00000131653|ENST00000326181|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	402.252903	802.491253	2.8992	0.0011662	-3.2892	-0.0013231	-0.39002	-0.00015689	402.2514754984459	19.879	0.49047	19.809	19.474	19.964	-0.070013	0.044822	-0.0021262	NaN	17.365	26	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51324			53822	3742	35884	35899							0.0821070373136763
SGSLKAIK	8	Unmodified	_SGSLKAIK_					0	0	0		nc|ENSG00000131653|Q6Q0C0-2|TRAF7;ENSG00000131653|ENST00000326181|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	nc|ENSG00000131653|Q6Q0C0-2|TRAF7	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	402.252903	802.491253	0.012696	5.1069E-06	-0.76035	-0.00030585	-0.74765	-0.00030074	402.25244995223795	19.772	0.32962	19.843	19.703	20.032	0.070711	0.078685	-9.1717E-05	NaN	17.365	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128880			53823	3742	35884	35899							0.0821070373136763
SGSRPLAPI	9	Unmodified	_SGSRPLAPI_					0	0	0		nc|ENSG00000131650|Q8NCW0-4|KREMEN2	nc|ENSG00000131650|Q8NCW0-4|KREMEN2	nc|ENSG00000131650|Q8NCW0-4|KREMEN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2610168457031	2	449.261259	896.507966	-0.13632	-6.1244E-05	-1.331	-0.00059798	-1.4674	-0.00065923	449.26055039529075	68.162	1.4065	68.547	67.946	69.352	0.38483					66	33	3	0	0	0	0.64922	1	7478	7478		44.117	0	1	1822600			53824	14918	35885	35900	61054	61054					0.055572046173210765
SGSRPLAPI	9	Unmodified	_SGSRPLAPI_					0	0	0		nc|ENSG00000131650|Q8NCW0-4|KREMEN2	nc|ENSG00000131650|Q8NCW0-4|KREMEN2	nc|ENSG00000131650|Q8NCW0-4|KREMEN2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	449.261259	896.507966	-1.4572	-0.00065468	-0.23807	-0.00010696	-1.6953	-0.00076163	449.26099715764127	69.142	0.55254	69.142	68.822	69.375	0	0.34164	0.00084937	NaN	44.117	43	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91082			53825	14918	35885	35900							0.055572046173210765
SGTCSHLPK	9	Unmodified	_SGTCSHLPK_					0	0	0			REV__ENSG00000043039|ENST00000281437|BARX2	REV__ENSG00000043039|ENST00000281437|BARX2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7716979980469	2	465.229102	928.443651	-0.11233	-5.2259E-05	0.24196	0.00011256	0.12963	6.0306E-05	465.2291686687469	22.362	0.69854	21.751	21.332	22.031	-0.6107					28	17	2	0	0	0	0.20789	1	938	938		39.253	0	1	92070	+		53826	16333	35886	35901	61055	61055					-0.023433185311318994
SGTEQLPVPAL	11	Unmodified	_SGTEQLPVPAL_					0	0	0			REV__ENST00000577696.5_1_17:80407155-80408531:-|nuORF	REV__ENST00000577696.5_1_17:80407155-80408531:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.3034057617188	2	556.303321	1110.59209	-0.51504	-0.00028652	-0.18595	-0.00010345	-0.70099	-0.00038996	556.3031289934069	44.609	0.93458	45.073	44.578	45.513	0.46313					57	22	3	0	0	0	0.55601	1	4133	4133		47.96	4.3087	1	3680800	+		53827	29014	35887	35902	61056	61056					0.04121690923557253
SGTFCACATVL	11	Unmodified	_SGTFCACATVL_					0	0	0		nc|ENSG00000060656|Q92729-3|PTPRU;ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU;ENST00000465525.6_1_1:29647190-29652170:+|nuORF	nc|ENSG00000060656|Q92729-3|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7453002929688	2	536.743728	1071.4729	-0.65994	-0.00035422	4.3846	0.0023534	3.7247	0.0019992	536.7459714608132	69.256	1.875	69.803	69.324	71.199	0.54694					117	48	5	0	0	0	0.75495	1	7711	7711		20.947	1.8434	1	5310600			53828	1066	35888	35903	61057	61057					-0.05997542297154723
SGTSKKKA	8	Unmodified	_SGTSKKKA_					0	0	0			REV__ENSG00000159339|ENST00000375448|PADI4	REV__ENSG00000159339|ENST00000375448|PADI4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2088928222656	2	403.74016	805.465767	-0.18717	-7.5568E-05	-0.89426	-0.00036105	-1.0814	-0.00043662	403.7396942088429	85.898	0.89521	85.965	85.641	86.537	0.067261					31	20	2	0	0	0	0.4196	1	8671	8671		12.207	11.002	1	95074	+		53829	20656	35889	35904	61058	61058					0.055252292089562616
SGVCTLVIPT	10	Unmodified	_SGVCTLVIPT_					0	0	0		ENSG00000179057|ENST00000513874|IGSF22;ENST00000510673.1_1_11:18727144-18727628:-|nuORF	ENSG00000179057|ENST00000513874|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7801208496094	2	495.270435	988.526318	-0.50843	-0.00025181	-2.7405	-0.0013573	-3.249	-0.0016091	495.2690426561174	85.767	0.70688	86.211	85.784	86.49	0.44331					26	16	2	0	0	0	0.37624	1	9989	9989		19.997	3.5236	1	208340			53830	7241	35890	35905	61059	61059					0.03159578477016112
SGVDAVREW	9	Unmodified	_SGVDAVREW_					0	0	0		ENST00000540037.5_2_12:6464995-6472854:-|nuORF;nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A	ENST00000540037.5_2_12:6464995-6472854:-|nuORF	ENST00000540037.5_2_12:6464995-6472854:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.75048828125	2	509.751256	1017.48796	-0.69062	-0.00035204	-0.044417	-2.2641E-05	-0.73504	-0.00037469	509.7510305996481	45.604	0.73212	45.573	45.278	46.01	-0.031067					29	16	2	0	0	0	0.18338	1	3691	3691		77.318	10.356	1	346550			53831	2572	35891	35906	61060	61060					-0.020085911132923684
SGVGTLLR	8	Unmodified	_SGVGTLLR_					0	0	0		ENST00000301761.6_1_11:61214076-61214163:+|nuORF	ENST00000301761.6_1_11:61214076-61214163:+|nuORF	ENST00000301761.6_1_11:61214076-61214163:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7054138183594	2	401.742702	801.470852	1.6015	0.0006434	-1.0421	-0.00041864	0.55947	0.00022476	401.7406046954423	25.523	0.3811	25.265	25.043	25.424	-0.25721					13	8	2	0	0	0	0.4196	1	1290	1290		35.618	0	1	28552			53832	9809	35892	35907	61061	61061					0.062175330715604105
SGVRVKAGGI	10	Unmodified	_SGVRVKAGGI_					0	0	0			REV__ENST00000599808.1_1_19:19049437-19049791:-|nuORF	REV__ENST00000599808.1_1_19:19049437-19049791:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2870178222656	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.86718	1	12467	12467		27.882	0	1	3080300	+		53833	29304	35893	35908	61062	61062					0.08748582400005489
SGVRVKAGGI	10	Unmodified	_SGVRVKAGGI_					0	0	0			REV__ENST00000599808.1_1_19:19049437-19049791:-|nuORF	REV__ENST00000599808.1_1_19:19049437-19049791:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2877502441406	2	472.287808	942.561064	2.1469	0.001014	-2.0547	-0.00097039	0.092286	4.3586E-05	472.2867264071782	114.66	1.2655	114.67	114.37	115.64	0.0094528					102	61	2	0	0	0	0.85939	1	13916	13916		23.042	3.6825	1	83672	+		53834	29304	35893	35908	61063	61063					0.08748582400005489
SGVSRPVYR	9	Unmodified	_SGVSRPVYR_					0	0	0		ENSG00000164694|ENST00000297267|FNDC1;nc|ENSG00000164694|Q4ZHG4-2|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.78082275390625	2	510.78289	1019.55123	0.57365	0.00029301	-0.7572	-0.00038677	-0.18355	-9.3756E-05	510.78246923554457	26.283	0.78617	26.329	26.034	26.821	0.045507					43	21	3	0	0	0	0.48102	1	1124	1124		52.937	1.6012	1	147580			53835	5993	35894	35909	61064	61064					0.04223394394614388
SGVVTALVLLL	11	Unmodified	_SGVVTALVLLL_					0	0	0		ENSG00000155850|ENST00000286298|SLC26A2	ENSG00000155850|ENST00000286298|SLC26A2	ENSG00000155850|ENST00000286298|SLC26A2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	542.8490600585938	2	542.85245	1083.69035	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.05	1	117.14	116.64	117.64	0.090004								0	0	0	0.56276	1	12408	12408		14.865	0	1				53836	5346	35895	35910	61065	61065					0.1518491923941383
SGYQIWQFSN	10	Unmodified	_SGYQIWQFSN_					0	0	0			REV__ENSG00000119686|ENST00000238667|FLVCR2	REV__ENSG00000119686|ENST00000238667|FLVCR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	410.5249328613281	3	410.524372	1228.55129	-0.15788	-6.4814E-05	3.5909	0.0014742	3.4331	0.0014094	410.5257114016994	56.503	1.144	56.49	56.243	57.387	-0.012203					108	46	3	0	0	0	0.86444	1	5082	5082		14.694	5.0475	1	1981300	+		53837	18370	35896	35911	61066	61066					-0.053846503960585324
SHALEKSH	8	Unmodified	_SHALEKSH_					0	0	0		nc|ENSG00000181896|Q8IZC7-2|ZNF101;ENSG00000181896|ENST00000592502|ZNF101	nc|ENSG00000181896|Q8IZC7-2|ZNF101	nc|ENSG00000181896|Q8IZC7-2|ZNF101	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.7322692871094	2	454.732866	907.451179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.233	1	28.269	27.769	28.769	0.03607								0	0	0	0.29703	1	1328	1328		37.159	0	1				53838	7412	35897	35912	61067	61067					-0.00624842939203063
SHAMPKISLQ	10	Unmodified	_SHAMPKISLQ_					0	0	0			REV__nc|ENSG00000024048|Q8IWV8-3|UBR2	REV__nc|ENSG00000024048|Q8IWV8-3|UBR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	556.29736328125	2	556.300059	1110.58556	0.011991	6.6705E-06	-3.1621	-0.0017591	-3.1501	-0.0017524	556.2978409822496	68.82	0.57928	68.853	68.537	69.117	0.033005					38	22	2	0	0	0	0.40664	1	6578	6578		63.534	2.5619	1	84639	+		53839	16254	35898	35913	61068	61068					0.0346947449122581
SHAMPKISLQ	10	Unmodified	_SHAMPKISLQ_					0	0	0			REV__nc|ENSG00000024048|Q8IWV8-3|UBR2	REV__nc|ENSG00000024048|Q8IWV8-3|UBR2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	556.300059	1110.58556	-0.91723	-0.00051026	-2.4991	-0.0013903	-3.4163	-0.0019005	556.2981596863333	69.134	0.50914	69.134	68.822	69.331	0	0.19305	0.00068567	NaN	63.534	35	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47592	+		53840	16254	35898	35913							0.0346947449122581
SHAMPKISLQ	10	Unmodified	_SHAMPKISLQ_					0	0	0			REV__nc|ENSG00000024048|Q8IWV8-3|UBR2	REV__nc|ENSG00000024048|Q8IWV8-3|UBR2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	556.300059	1110.58556	0.011991	6.6705E-06	-3.1621	-0.0017591	-3.1501	-0.0017524	556.2978409822496	68.82	0.57928	68.853	68.537	69.117	0.033005	-0.08807	-5.1999E-05	NaN	63.534	38	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84639	+		53841	16254	35898	35913							0.0346947449122581
SHAMPKISLQ	10	Unmodified	_SHAMPKISLQ_					0	0	0			REV__nc|ENSG00000024048|Q8IWV8-3|UBR2	REV__nc|ENSG00000024048|Q8IWV8-3|UBR2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	556.300059	1110.58556	0.56899	0.00031653	-3.9787	-0.0022133	-3.4097	-0.0018968	556.2977506736099	68.73	0.66137	68.859	68.573	69.235	0.12839	-0.082703	-0.00096048	NaN	63.534	33	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114330	+		53842	16254	35898	35913							0.0346947449122581
SHATHPKRSI	10	Unmodified	_SHATHPKRSI_					0	0	0			REV__ENSG00000144596|ENST00000621039|GRIP2	REV__ENSG00000144596|ENST00000621039|GRIP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3297729492188	2	567.312346	1132.61014	-1.2025	-0.00068221	3.6725	0.0020835	2.47	0.0014012	567.8159182611206	93.572	0.21117	93.642	93.54	93.751	0.069603					6	4	2	0	0	0	0.37624	1	9729	9729		35.152	4.8343	1	60744	+		53843	19902	35899	35914	61069	61069					0.049138706889380046
SHATHPKRSI	10	Unmodified	_SHATHPKRSI_					0	0	0			REV__ENSG00000144596|ENST00000621039|GRIP2	REV__ENSG00000144596|ENST00000621039|GRIP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.329833984375	2	567.312346	1132.61014	1.8007	0.0010216	-2.1082	-0.001196	-0.30748	-0.00017444	567.8136032971829	92.494	0.68556	92.43	91.861	92.546	-0.06414					23	15	3	0	0	0	0.37624	1	9766	9766		30.318	5.7985	1	152010	+		53844	19902	35899	35914	61070	61070					0.049138706889380046
SHCEDPQAHTV	11	Unmodified	_SHCEDPQAHTV_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	612.33447265625	2	612.259119	1222.50368	0.23123	0.00014157	-4.1763	-0.002557	-3.9451	-0.0024154	612.2565584268593	52.565	0.58083	53.18	52.95	53.531	0.61436					31	13	3	0	0	0	0.16519	1	5324	5324		43.651	12.121	1	564190			53845	6613	35900	35915	61071	61071					-0.09866672658563402
SHDIDDALSI	10	Unmodified	_SHDIDDALSI_					0	0	0			REV__nc|ENSG00000153130|Q9UIL1-3|SCOC	REV__nc|ENSG00000153130|Q9UIL1-3|SCOC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.2578735351562	2	543.259111	1084.50367	-0.67238	-0.00036528	0.51176	0.00027802	-0.16062	-8.7258E-05	543.2593108514465	54.448	0.67265	55.033	54.79	55.463	0.58474					36	15	3	0	0	0	0.77314	1	5590	5590		40.778	6.6056	1	840750	+		53846	29936	35901	35916	61072	61072					-0.0352034938689485
SHEDPQGLL	9	Unmodified	_SHEDPQGLL_					0	0	0		ENST00000588534.1_1_19:2832263-2834847:+|nuORF;ENSG00000172006|ENST00000317243|ZNF554	ENST00000588534.1_1_19:2832263-2834847:+|nuORF	ENST00000588534.1_1_19:2832263-2834847:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.2827453613281	2	498.243264	994.471974	0.82628	0.00041169	-1.0286	-0.00051251	-0.20235	-0.00010082	498.2426674580893	32.97	0.58886	33.181	32.935	33.524	0.21168					22	13	2	0	0	0	0.20789	1	2361	2361		44.117	12.162	1	239630			53847	6734	35902	35917	61073	61073					-0.025482973501880224
SHFCATFTNH	10	Unmodified	_SHFCATFTNH_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.7493286132812	2	582.74819	1163.48183	-0.0080718	-4.7038E-06	2.2882	0.0013335	2.2801	0.0013288	582.7495457268669	23.371	0.4152	23.432	23.267	23.682	0.060431					23	16	2	0	0	0	0.82886	1	765	765		37.812	3.8899	1	34758	+		53848	16090	35903	35918	61074	61074					-0.093374326164394
SHFLCLRFKKS	11	Unmodified	_SHFLCLRFKKS_					0	0	0		ENSG00000180773|ENST00000326402|SLC36A4	ENSG00000180773|ENST00000326402|SLC36A4	ENSG00000180773|ENST00000326402|SLC36A4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30096435546875	3	455.92018	1364.73871	0.15109	6.8883E-05	-1.9542	-0.00089097	-1.8031	-0.00082209	456.2538140171421	33.227	0.25683	33.337	33.248	33.505	0.10991					14	10	2	0	0	0	0.17586	1	1624	1624		21.78	5.8598	1	55674			53849	7346	35904	35919	61075	61075					0.07093089607656111
SHFTALGLQKI	11	Unmodified	_SHFTALGLQKI_					0	0	0		nc|ENSG00000186638|Q5T7B8-4|KIF24;nc|ENSG00000186638|Q5T7B8-2|KIF24;ENSG00000186638|ENST00000402558|KIF24;nc|ENSG00000186638|Q5T7B8-3|KIF24	nc|ENSG00000186638|Q5T7B8-4|KIF24	nc|ENSG00000186638|Q5T7B8-4|KIF24	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	607.84716796875	2	607.84823	1213.68191	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.342	1	65.342	64.842	65.842	0								0	0	0	0.56276	1	5765	5765		24.519	2.5593	1				53850	7809	35905	35920	61076	61076					0.0836136532279852
SHGAGAAA	8	Unmodified	_SHGAGAAA_					0	0	0		chr19:46297102-46298383|34|11.29|0.37|4.94|+|0|HIF3A,None|1	chr19:46297102-46298383|34|11.29|0.37|4.94|+|0|HIF3A,None|1	chr19:46297102-46298383|34|11.29|0.37|4.94|+|0|HIF3A,None|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3397827148438	1	641.300164	640.292888	0.56906	0.00036494	-1.8318	-0.0011747	-1.2627	-0.00080977	641.2989584400975	59.988	1.6406	60.104	58.752	60.393	0.11676					70	54	2	0	0	0	0.4196	1	5018	5018		0	0	1	106970			53851	283	35906	35921	61077	61077					-0.04164717127616768
SHGEVTSVPH	10	Unmodified	_SHGEVTSVPH_					0	0	0		ENST00000440904.1_1_1:155200937-155204113:+|nuORF	ENST00000440904.1_1_1:155200937-155204113:+|nuORF	ENST00000440904.1_1_1:155200937-155204113:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.2548828125	2	525.254163	1048.49377	1.0195	0.00053547	-1.0983	-0.0005769	-0.078871	-4.1427E-05	525.2533919831185	20.046	0.50793	20.117	19.862	20.37	0.071129					32	19	2	0	0	0	0.8608	1	448	448		34.173	2.6427	1	42745			53852	11777	35907	35922	61078	61078					-0.02853492601616381
SHGIRRLHT	9	Unmodified	_SHGIRRLHT_					0	0	0		nc|ENSG00000048162|Q9Y3C1-3|NOP16;nc|ENSG00000048162|Q9Y3C1-2|NOP16	nc|ENSG00000048162|Q9Y3C1-3|NOP16	nc|ENSG00000048162|Q9Y3C1-3|NOP16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.8067016601562	2	538.807231	1075.59991	-0.16838	-9.0727E-05	-0.74988	-0.00040404	-0.91826	-0.00049477	538.8067545662908	90.656	4.0484	90.725	89.127	93.176	0.069336					223	95	3	0	0	0	0.67345	1	9300	9300		42.396	3.1433	1	849020			53853	14746	35908	35923	61079	61079					0.06513307754357811
SHGIRRLHT	9	Unmodified	_SHGIRRLHT_					0	0	0		nc|ENSG00000048162|Q9Y3C1-3|NOP16;nc|ENSG00000048162|Q9Y3C1-2|NOP16	nc|ENSG00000048162|Q9Y3C1-3|NOP16	nc|ENSG00000048162|Q9Y3C1-3|NOP16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8064575195312	2	538.807231	1075.59991	2.2674	0.0012217	-3.269	-0.0017614	-1.0016	-0.00053969	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.78983	1	9428	9428		27.882	2.3082	1	835060			53854	14746	35908	35923	61080	61080					0.06513307754357811
SHGKPLVVPR	10	Unmodified	_SHGKPLVVPR_					0	0	0		chrX:72276234-72277186|20|18.05|0.05|8.45|-|1|RPS4X,None|2	chrX:72276234-72277186|20|18.05|0.05|8.45|-|1|RPS4X,None|2	chrX:72276234-72277186|20|18.05|0.05|8.45|-|1|RPS4X,None|2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.316650390625	2	545.330008	1088.64546	1.2598	0.00068703	4.1043	0.0022382	5.3641	0.0029252	545.3298355669284	90.483	0.49591	90.53	90.177	90.673	0.046448					13	11	2	0	0	0	0.37624	1	9341	9341		16.717	0	1	47498			53855	554	35909	35924	61081	61081					0.10468533216749165
SHGLPLAPPL	10	Unmodified	_SHGLPLAPPL_					0	0	0		ENST00000367202.8_1_1:204120934-204121090:-|nuORF	ENST00000367202.8_1_1:204120934-204121090:-|nuORF	ENST00000367202.8_1_1:204120934-204121090:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2907409667969	2	501.292559	1000.57057	-0.45423	-0.0002277	-3.8659	-0.001938	-4.3202	-0.0021657	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.84112	1	10048	10048		37.159	8.0096	1	9727400			53856	10539	35910	35925	61082	61082					0.07030350685499798
SHGLTAYW	8	Unmodified	_SHGLTAYW_					0	0	0		ENST00000367081.7_1_6:159185637-159185862:+|nuORF	ENST00000367081.7_1_6:159185637-159185862:+|nuORF	ENST00000367081.7_1_6:159185637-159185862:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7251892089844	2	467.72451	933.434466	-1.0737	-0.00050218	3.3269	0.0015561	2.2532	0.0010539	467.72591085184155	62.432	1.4312	62.82	62.273	63.704	0.38779					65	32	3	0	0	0	0.86791	1	6676	6676		28.254	1.4582	1	686640			53857	10532	35911	35926	61083	61083					-0.03491343825146487
SHGQGLAPL	9	Unmodified	_SHGQGLAPL_					0	0	0		ENST00000393800.6_2_11:68382148-68382592:+|nuORF	ENST00000393800.6_2_11:68382148-68382592:+|nuORF	ENST00000393800.6_2_11:68382148-68382592:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.23828125	2	440.237784	878.461016	-0.3905	-0.00017191	0.98502	0.00043364	0.59452	0.00026173	440.2380657993963	18.443	0.50097	18.366	18.148	18.649	-0.07671					22	12	3	0	0	0	0.76996	1	315	315		33.516	3.674	1	83776			53858	11054	35912	35927	61084	61084					0.016923450661806783
SHGSLPLPT	9	Unmodified	_SHGSLPLPT_					0	0	0			REV__nc|ENSG00000257923|P39880-6|CUX1	REV__nc|ENSG00000257923|P39880-6|CUX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.7447814941406	2	454.745442	907.476331	1.0531	0.00047889	-2.1634	-0.00098381	-1.1103	-0.00050492	454.74431898752607	103.74	1.4301	103.79	103.32	104.75	0.041489					80	34	3	0	0	0	0.74721	1	11242	11242		37.159	0	1	827910	+		53859	23925	35913	35928	61085	61085					0.01889211863363016
SHGSLPLPT	9	Unmodified	_SHGSLPLPT_					0	0	0			REV__nc|ENSG00000257923|P39880-6|CUX1	REV__nc|ENSG00000257923|P39880-6|CUX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	454.74481201171875	2	454.745442	907.476331	-1.7624	-0.00080143	0.73402	0.00033379	-1.0283	-0.00046763	454.7456677884031	103.99	1.1163	104.08	103.63	104.75	0.093857					50	27	3	0	0	0	0.78536	1	10940	10940		29.15	1.2673	1	257420	+		53860	23925	35913	35928	61086	61086					0.01889211863363016
SHHPGLAH	8	Unmodified	_SHHPGLAH_					0	0	0		nc|ENSG00000179348|P23769-2|GATA2;ENSG00000179348|ENST00000341105|GATA2	nc|ENSG00000179348|P23769-2|GATA2	nc|ENSG00000179348|P23769-2|GATA2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2615051269531	2	428.214643	854.414734	-1.0703	-0.00045833	0.65197	0.00027918	-0.41835	-0.00017914	428.2151003788328	90.597	0.23073	91.067	90.855	91.086	0.47068					7	5	2	0	0	0	0.4196	1	10761	10761		19.36	0	1	84945			53861	7265	35914	35929	61087	61087					-0.018296750452350352
SHIKLDWKTR	10	Unmodified	_SHIKLDWKTR_					0	0	0			REV__ENST00000529112.5_3_11:57193529-57194064:-|nuORF	REV__ENST00000529112.5_3_11:57193529-57194064:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.3623046875	2	642.364579	1282.7146	-1.1506	-0.00073908	-1.7683	-0.0011359	-2.9188	-0.001875	642.3639567174044	110.02	1.5274	110.03	109.72	111.24	0.0060425					172	55	4	0	0	0	0.86218	1	11841	11841		32.812	0	1	1394500	+		53862	26099	35915	35930	61088	61088					0.08455572445609505
SHKARLDT	8	Unmodified	_SHKARLDT_					0	0	0			REV__nc|ENSG00000153064|Q8NDB2-4|BANK1	REV__nc|ENSG00000153064|Q8NDB2-4|BANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2538146972656	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.87064	1	9708	9708		29.15	0.89528	1	1215000	+		53863	20329	35916	35931	61089	61089					0.027191324691784757
SHKATVHVRV	10	Unmodified	_SHKATVHVRV_					0	0	0		nc|ENSG00000139182|Q9BQT9-2|CLSTN3;ENSG00000139182|ENST00000266546|CLSTN3	nc|ENSG00000139182|Q9BQT9-2|CLSTN3	nc|ENSG00000139182|Q9BQT9-2|CLSTN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3296508789062	2	567.330539	1132.64652	1.203	0.00068247	-1.0748	-0.00060977	0.12815	7.2702E-05	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.86272	1	10731	10731		24.519	0.99649	1	4990000			53864	14956	35917	35932	61090	61090					0.08550747585650242
SHKFFNELVT	10	Unmodified	_SHKFFNELVT_					0	0	0			REV__ENSG00000154227|ENST00000679737|CERS3	REV__ENSG00000154227|ENST00000679737|CERS3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3551635742188	2	611.316763	1220.61897	2.3901	0.0014611	2.9605	0.0018098	5.3507	0.0032709	611.3195715684125	95.915	0.60452	95.857	95.635	96.239	-0.057526					18	13	2	0	0	0	0.37624	1	10312	10312		18.262	0	1	57158	+		53865	20373	35918	35933	61091	61091					0.01748799534743739
SHKGQLVAVLR	11	Unmodified	_SHKGQLVAVLR_					0	0	0			REV__ENSG00000124608|ENST00000244571|AARS2	REV__ENSG00000124608|ENST00000244571|AARS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3668212890625	2	604.367121	1206.71969	-1.2751	-0.00077064	0.82667	0.00049961	-0.44844	-0.00027102	604.3675622774762	107.87	0.68172	107.91	107.29	107.97	0.036125					51	16	4	0	0	0	0.74763	1	11466	11466		22.58	0.61977	1	15923000	+		53866	18600	35919	35934	61092	61092					0.12459876308253115
SHKGVARLVF	10	Unmodified	_SHKGVARLVF_					0	0	0			REV__nc|ENSG00000077327|O75602-2|SPAG6	REV__nc|ENSG00000077327|O75602-2|SPAG6	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.665283203125	2	557.330008	1112.64546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.718	1	72.849	72.349	73.349	0.13064								0	0	0	0.45132	1	6681	6681		31.53	5.9558	1		+		53867	16745	35920	35935	61093	61093					0.09364533216739801
SHKIRAGG	8	Unmodified	_SHKIRAGG_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.23748779296875	2	413.238119	824.461684	-1.33	-0.0005496	2.1463	0.00088694	0.81635	0.00033735	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.87064	1	7225	7225		29.15	1.2673	1	895630			53868	6721	35921	35936	61094	61094					0.04243184505901354
SHKIRAGG	8	Unmodified	_SHKIRAGG_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2381286621094	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.884	1	7395	7395		33.516	6.7195	1	1747900			53869	6721	35921	35936	61095	61095					0.04243184505901354
SHKIRAGG	8	Unmodified	_SHKIRAGG_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2380065917969	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.85277	2	7431	7431;7465		30.504	1.3541	1	2127000			53870	6721	35921	35936	61096;61097	61096					0.04243184505901354
SHKIRAGG	8	Unmodified	_SHKIRAGG_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2381591796875	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.884	1	7160	7160		33.516	3.0119	1	2012200			53871	6721	35921	35936	61098	61098					0.04243184505901354
SHKIRAGG	8	Unmodified	_SHKIRAGG_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.237548828125	2	413.238119	824.461684	-0.091267	-3.7715E-05	0.27761	0.00011472	0.18635	7.7005E-05	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.8347	1	8632	8632		23.042	1.3402	1	1247200			53872	6721	35921	35936	61099	61099					0.04243184505901354
SHKKREAKRR	10	Unmodified	_SHKKREAKRR_					0	0	0			REV__ENSG00000070061|ENST00000374647|ELP1	REV__ENSG00000070061|ENST00000374647|ELP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.3927612304688	2	648.391993	1294.76943	-0.0023386	-1.5163E-06	1.3575	0.00088021	1.3552	0.00087869	648.3927201405174	107.38	1.0747	107.34	106.86	107.93	-0.034409					97	25	4	0	0	0	0.76096	1	11733	11733		41.427	1.3684	1	36844000	+		53873	16595	35922	35937	61100	61100					0.13384004036925035
SHKKREAKRR	10	Unmodified	_SHKKREAKRR_					0	0	0			REV__ENSG00000070061|ENST00000374647|ELP1	REV__ENSG00000070061|ENST00000374647|ELP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3925170898438	2	648.391993	1294.76943	-1.1411	-0.00073988	1.6995	0.0011019	0.5584	0.00036206	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.8505	2	12851	12851;12955		19.104	2.6261	1	2297700	+		53874	16595	35922	35937	61101;61102	61101					0.13384004036925035
SHKKRKNKNR	10	Unmodified	_SHKKRKNKNR_					0	0	0		ENST00000485039.1_1_1:37967370-37979088:-|nuORF;nc|ENSG00000163875|Q9HAF1-2|MEAF6;ENSG00000163875|ENST00000296214|MEAF6;nc|ENSG00000163875|Q9HAF1-4|MEAF6;nc|ENSG00000163875|Q9HAF1-3|MEAF6	ENST00000485039.1_1_1:37967370-37979088:-|nuORF	ENST00000485039.1_1_1:37967370-37979088:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3992919921875	2	648.391993	1294.76943	2.6469	0.0017162	0.088016	5.7069E-05	2.7349	0.0017733	648.3925072746225	112.87	0.93895	112.84	112.65	113.59	-0.024811					50	23	3	0	0	0	0.86899	1	12520	12520		14.137	0	1	1216600			53875	5877	35923	35938	61103	61103					0.13384004036925035
SHKKRKNKNR	10	Unmodified	_SHKKRKNKNR_					0	0	0		ENST00000485039.1_1_1:37967370-37979088:-|nuORF;nc|ENSG00000163875|Q9HAF1-2|MEAF6;ENSG00000163875|ENST00000296214|MEAF6;nc|ENSG00000163875|Q9HAF1-4|MEAF6;nc|ENSG00000163875|Q9HAF1-3|MEAF6	ENST00000485039.1_1_1:37967370-37979088:-|nuORF	ENST00000485039.1_1_1:37967370-37979088:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3925170898438	2	648.391993	1294.76943	-1.1413	-0.00074001	2.745	0.0017798	1.6037	0.0010398	648.3936534392657	107.12	0.99413	107.16	106.63	107.62	0.036118					92	23	4	0	0	0	0.86471	1	11486	11486		30.318	4.7437	1	53885000			53876	5877	35923	35938	61104	61104					0.13384004036925035
SHKKSKKN	8	Unmodified	_SHKKSKKN_					0	0	0		nc|ENSG00000163714|O15042-3|U2SURP;nc|ENSG00000163714|O15042-2|U2SURP;ENSG00000163714|ENST00000473835|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.7856750488281	2	478.785433	955.556313	-0.82627	-0.00039561	1.1015	0.00052738	0.27522	0.00013177	478.7856844089399	92.054	2.1406	92.275	91.382	93.522	0.22157					110	50	4	0	0	0	0.87479	3	9301	9301;9326;9338		35.618	7.736	1	787100			53877	15051	35924	35939	61105;61106;61107	61105					0.07675698257230579
SHKKSKKN	8	Unmodified	_SHKKSKKN_					0	0	0		nc|ENSG00000163714|O15042-3|U2SURP;nc|ENSG00000163714|O15042-2|U2SURP;ENSG00000163714|ENST00000473835|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.7855224609375	2	478.785433	955.556313	0.70537	0.00033772	0.63532	0.00030418	1.3407	0.0006419	478.78492064616836	92.181	2.2722	92.339	91.473	93.745	0.15829					125	53	4	0	0	0	0.87479	1	9317	9317		30.504	0	1	756310			53878	15051	35924	35939	61108	61108					0.07675698257230579
SHKLAKLRRL	10	Unmodified	_SHKLAKLRRL_					0	0	0		nc|ENSG00000124920|Q9Y2G1-2|MYRF;ENSG00000124920|ENST00000278836|MYRF;ENST00000536352.5_1_11:61546644-61546896:+|nuORF;ENST00000537318.5_1_11:61546644-61549415:+|nuORF	nc|ENSG00000124920|Q9Y2G1-2|MYRF	nc|ENSG00000124920|Q9Y2G1-2|MYRF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.35595703125	2	611.398756	1220.78296	-0.40682	-0.00024873	-2.6384	-0.0016131	-3.0452	-0.0018618	611.3970399062658	95.878	0.21313	95.944	95.838	96.051	0.06591					7	4	2	0	0	0	0.37624	1	10041	10041		14.137	0	1	47474			53879	3369	35925	35940	61109	61109					0.18139861816189295
SHKLAKLRRL	10	Unmodified	_SHKLAKLRRL_					0	0	0		nc|ENSG00000124920|Q9Y2G1-2|MYRF;ENSG00000124920|ENST00000278836|MYRF;ENST00000536352.5_1_11:61546644-61546896:+|nuORF;ENST00000537318.5_1_11:61546644-61549415:+|nuORF	nc|ENSG00000124920|Q9Y2G1-2|MYRF	nc|ENSG00000124920|Q9Y2G1-2|MYRF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.35546875	2	611.398756	1220.78296	1.1392	0.00069653	-0.21705	-0.0001327	0.92219	0.00056383	611.3984185455895	95.738	0.46453	95.969	95.717	96.182	0.23103					15	10	2	0	0	0	0.37624	1	9826	9826		9.1829	0.94782	1	54349			53880	3369	35925	35940	61110	61110					0.18139861816189295
SHKLFELYTK	10	Unmodified	_SHKLFELYTK_					0	0	0		ENSG00000012963|ENST00000013070|UBR7	ENSG00000012963|ENST00000013070|UBR7	ENSG00000012963|ENST00000013070|UBR7	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3690185546875	2	633.348063	1264.68157	-0.08762	-5.5494E-05	-4.185	-0.0026506	-4.2727	-0.0027061	633.3447489593174	98.252	0.1993	98.252	98.15	98.349	0					7	4	2	0	0	0	0.37624	1	9874	9874		30.318	7.7381	1	43020			53881	806	35926	35941	61111	61111					0.05981945602934502
SHKRKLGG	8	Unmodified	_SHKRKLGG_					0	0	0			REV__ENSG00000167565|ENST00000322354|SERTAD3	REV__ENSG00000167565|ENST00000322354|SERTAD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7680969238281	2	441.767043	881.519533	-0.15332	-6.7733E-05	2.2136	0.00097789	2.0603	0.00091016	441.76810949175115	107.35	0.84094	107.31	106.9	107.75	-0.034409					58	19	4	0	0	0	0.89043	1	11688	11688		35.618	10.168	1	1492500	+		53882	21395	35927	35942	61112	61112					0.07403446431339944
SHKRPTRKL	9	Unmodified	_SHKRPTRKL_					0	0	0			REV__ENSG00000046889|ENST00000288368|PREX2	REV__ENSG00000046889|ENST00000288368|PREX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	561.8453979492188	2	561.846356	1121.67816	0.82777	0.00046508	-1.9853	-0.0011154	-1.1576	-0.00065037	561.8450907704936	96.8	1.7474	96.963	96.403	98.15	0.16317					98	40	4	0	0	0	0.7932	1	10013	10013		26.693	1.2427	1	906900	+		53883	16346	35928	35943	61113	61113					0.12218740339608303
SHKRVAPKQL	10	Unmodified	_SHKRVAPKQL_					0	0	0			REV__ENSG00000178852|ENST00000331493|EFCAB13	REV__ENSG00000178852|ENST00000331493|EFCAB13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3536987304688	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.86348	1	10813	10813		31.53	2.3598	1	61091000	+		53884	22298	35929	35944	61114	61114					0.11863607136797327
SHKRVAPKQL	10	Unmodified	_SHKRVAPKQL_					0	0	0			REV__ENSG00000178852|ENST00000331493|EFCAB13	REV__ENSG00000178852|ENST00000331493|EFCAB13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.3533325195312	2	582.354014	1162.69348	-0.84093	-0.00048972	-0.12395	-7.2182E-05	-0.96488	-0.0005619	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.86471	1	11351	11351		30.318	1.1477	1	77752000	+		53885	22298	35929	35944	61115	61115					0.11863607136797327
SHKRVAPKQL	10	Unmodified	_SHKRVAPKQL_					0	0	0			REV__ENSG00000178852|ENST00000331493|EFCAB13	REV__ENSG00000178852|ENST00000331493|EFCAB13	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.354248046875	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.5	1	112.47	111.97	112.97	-0.025414								0	0	0	0.45132	1	12433	12433		24.519	3.5723	1		+		53886	22298	35929	35944	61116	61116					0.11863607136797327
SHKRYLRRLK	10	Unmodified	_SHKRYLRRLK_					0	0	0			REV__nc|ENSG00000120669|Q9NX45-2|SOHLH2	REV__nc|ENSG00000120669|Q9NX45-2|SOHLH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.9482421875	3	452.94935	1355.82622	-1.7681	-0.00080086	-0.5215	-0.00023621	-2.2896	-0.0010371	452.9490232633925	106.96	1.0839	107.01	106.56	107.64	0.053757					98	25	5	0	0	0	0.86549	1	11370	11370		29.551	3.659	1	4103500	+		53887	29810	35930	35945	61117	61117					0.16254051593455188
SHKSTLIKH	9	Unmodified	_SHKSTLIKH_					0	0	0		nc|ENSG00000188227|Q6ZN11-3|ZNF793;nc|ENSG00000188227|Q6ZN11-2|ZNF793;ENSG00000188227|ENST00000627814|ZNF793	nc|ENSG00000188227|Q6ZN11-3|ZNF793	nc|ENSG00000188227|Q6ZN11-3|ZNF793	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.804931640625	2	525.806365	1049.59818	0.50318	0.00026458	-2.8574	-0.0015024	-2.3542	-0.0012379	525.804756731057	16.626	0.52072	16.018	15.868	16.389	-0.60802					18	11	3	0	0	0	0.75725	1	154	154		36.447	0.82846	1	391580			53888	7915	35931	35946	61118	61118					0.07536253945772842
SHKSTLIKH	9	Unmodified	_SHKSTLIKH_					0	0	0		nc|ENSG00000188227|Q6ZN11-3|ZNF793;nc|ENSG00000188227|Q6ZN11-2|ZNF793;ENSG00000188227|ENST00000627814|ZNF793	nc|ENSG00000188227|Q6ZN11-3|ZNF793	nc|ENSG00000188227|Q6ZN11-3|ZNF793	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	525.806365	1049.59818	1.0339	0.00054362	-3.3267	-0.0017492	-2.2929	-0.0012056	525.80451634497	16.607	0.45287	16.12	15.959	16.412	-0.48718	0.05103	-0.00023508	NaN	36.447	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	348810			53889	7915	35931	35946							0.07536253945772842
SHKTFRIKRF	10	Unmodified	_SHKTFRIKRF_					0	0	0		ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.59478759765625	3	440.594684	1318.76222	-0.019721	-8.689E-06	0.26954	0.00011876	0.24982	0.00011007	440.59463679641283	25.358	1.7124	25.03	24.476	26.188	-0.32825					109	38	4	0	0	0	0.86409	2	1276	1276;1301		28.081	3.8056	1	990660			53890	8368	35932	35947	61119;61120	61119					0.1155927143649933
SHKTFRIKRFL	11	Unmodified	_SHKTFRIKRFL_					0	0	0		ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.2886657714844	3	478.289372	1431.84629	1.1949	0.00057149	-1.5717	-0.00075172	-0.37683	-0.00018023	478.2885117236148	34.113	0.86948	34.323	33.942	34.812	0.21002					51	20	3	0	0	0	0.71803	1	2513	2513		28.577	1.827	1	928240			53891	8368	35933	35948	61121	61121					0.14763802533411763
SHKTFRIKRFL	11	Unmodified	_SHKTFRIKRFL_					0	0	0		ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.6228332519531	3	478.289372	1431.84629	0.25122	0.00012016	-0.75713	-0.00036213	-0.50591	-0.00024197	478.2889922009053	34.005	0.69975	34.31	34.035	34.735	0.30494					50	16	4	0	0	0	0.74405	1	2500	2500		23.378	6.8481	1	886130			53892	8368	35933	35948	61122	61122					0.14763802533411763
SHLAVTCFG	9	Unmodified	_SHLAVTCFG_					0	0	0			REV__ENST00000505320.5_1_4:52948630-52961050:+|nuORF	REV__ENST00000505320.5_1_4:52948630-52961050:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7231140136719	2	467.726195	933.437837	-0.19764	-9.244E-05	0.013003	6.0817E-06	-0.18463	-8.6358E-05	467.7254288363917	78.079	0.57407	78.484	78.223	78.797	0.40531					20	13	2	0	0	0	0.20789	1	8874	8874		23.042	0	1	198490	+		53893	27879	35934	35949	61123	61123					-0.031544170427764584
SHLCRVAALR	10	Unmodified	_SHLCRVAALR_					0	0	0			REV__nc|ENSG00000114098|Q8IUR7-7|ARMC8	REV__nc|ENSG00000114098|Q8IUR7-7|ARMC8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.31787109375	2	563.319117	1124.62368	-1.0735	-0.0006047	-3.5665	-0.0020091	-4.6399	-0.0026138	563.8174777116847	55.775	1.0022	55.775	55.238	56.24	0					49	27	4	0	0	0	0.86471	1	4755	4755		30.318	1.1682	1	74923	+		53894	18029	35935	35950	61124	61124					0.06635405196493593
SHLFLILISIL	11	Unmodified	_SHLFLILISIL_					0	0	0			REV__ENST00000566685.1_1_16:23478014-23478370:-|nuORF	REV__ENST00000566685.1_1_16:23478014-23478370:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3744506835938	2	634.902474	1267.7904	6.841	0.0043434	1.0879	0.00069069	7.9289	0.0050341	634.9032361270372	110.39	0.71355	110.46	110.21	110.92	0.067993					44	27	2	0	0	0	0.16388	1	13454	13454		30.318	0	1	312480	+		53895	24872	35936	35951	61125	61125					0.16721156573248663
SHLFSQEELVN	11	Unmodified	_SHLFSQEELVN_					0	0	0		ENST00000561720.5_1_16:58529427-58541082:+|nuORF;nc|ENSG00000103034|Q9ULP0-4|NDRG4;nc|ENSG00000103034|Q9ULP0-2|NDRG4;ENSG00000103034|ENST00000570248|NDRG4;nc|ENSG00000103034|Q9ULP0-8|NDRG4;nc|ENSG00000103034|Q9ULP0-5|NDRG4;nc|ENSG00000103034|Q9ULP0-7|NDRG4;nc|ENSG00000103034|Q9ULP0-3|NDRG4;nc|ENSG00000103034|Q9ULP0-6|NDRG4;ENST00000565981.5_1_16:58539993-58546041:+|nuORF	ENST00000561720.5_1_16:58529427-58541082:+|nuORF	ENST00000561720.5_1_16:58529427-58541082:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7789001464844	3	434.882337	1301.62518	0.53198	0.00023135	3.2364	0.0014074	3.7683	0.0016388	435.2192585378378	61.859	0.65312	61.889	61.634	62.287	0.029575					41	26	2	0	0	0	0.17244	1	5815	5815		7.0192	0	1	109480			53896	2043	35937	35952	61126	61126					-0.013567270243811436
SHLGWSRFLL	10	Unmodified	_SHLGWSRFLL_					0	0	0		ENST00000382214.7_1_20:388725-389346:+|nuORF	ENST00000382214.7_1_20:388725-389346:+|nuORF	ENST00000382214.7_1_20:388725-389346:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7851867675781	3	405.892619	1214.65603	0.47419	0.00019247	0.94712	0.00038443	1.4213	0.0005769	405.89424569215083	31.567	0.25821	31.647	31.428	31.686	0.079834					6	5	2	0	0	0	0.37624	1	2137	2137		10.587	0	1	37250			53897	10970	35938	35953	61127	61127					0.05728515871169293
SHLIHVPAL	9	Unmodified	_SHLIHVPAL_					0	0	0		ENST00000513604.5_1_5:148406133-148406409:-|nuORF	ENST00000513604.5_1_5:148406133-148406409:-|nuORF	ENST00000513604.5_1_5:148406133-148406409:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7923889160156	2	493.792727	985.5709	-1.0082	-0.00049786	-0.36057	-0.00017804	-1.3688	-0.0006759	493.79239689427686	91.796	2.3688	92.259	91.807	94.176	0.46249					119	55	4	0	0	0	0.67235	1	10999	10999		42.474	8.3019	1	3049900			53898	13056	35939	35954	61128	61128					0.07753770405372507
SHLILILFHT	10	Unmodified	_SHLILILFHT_					0	0	0		ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	ENSG00000180919|ENST00000316529|OR56B4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3585205078125	2	597.355691	1192.69683	1.8736	0.0011192	1.6831	0.0010054	3.5566	0.0021246	597.3562887169959	99.941	2.3701	100.27	99.147	101.52	0.33294					172	60	4	0	0	0	0.85466	1	12071	12071		20.947	3.582	1	4830100			53899	7359	35940	35955	61129	61129					0.10818857190815834
SHLKSIELS	9	Unmodified	_SHLKSIELS_					0	0	0		ENST00000383686.2_1_3:110611078-110612293:-|nuORF	ENST00000383686.2_1_3:110611078-110612293:-|nuORF	ENST00000383686.2_1_3:110611078-110612293:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	507.3015441894531	2	507.284931	1012.55531	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.978	1	33.03	32.53	33.53	0.05246								0	0	0	0.30416	1	1569	1569		29.15	0	1				53900	10982	35941	35956	61130	61130					0.04953439097653245
SHLLLLLLIPH	11	Unmodified	_SHLLLLLLIPH_					0	0	0		ENST00000262809.8_1_19:18554702-18554960:-|nuORF	ENST00000262809.8_1_19:18554702-18554960:-|nuORF	ENST00000262809.8_1_19:18554702-18554960:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3767700195312	2	634.908091	1267.80163	-0.13262	-8.4203E-05	-0.67775	-0.00043031	-0.81037	-0.00051451	634.9076387485238	117.62	0.26853	117.55	117.36	117.63	-0.07531					10	8	2	0	0	0	0.17868	1	12617	12617		5.5578	0.33768	1	77440			53901	9447	35942	35957	61131	61131					0.17843978667383453
SHLPLNNIVPP	11	Unmodified	_SHLPLNNIVPP_					0	0	0			REV__ENSG00000128849|ENST00000281282|CGNL1	REV__ENSG00000128849|ENST00000281282|CGNL1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	600.844482421875	2	600.840405	1199.66626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.551	1	28.573	28.073	29.073	0.021948								0	0	0	0.56276	1	1178	1178		30.318	7.2752	1		+		53902	18796	35943	35958	61132	61132					0.07441078805754842
SHLPPPPVN	9	Unmodified	_SHLPPPPVN_					0	0	0			REV__ENSG00000176571|ENST00000518476|CNBD1	REV__ENSG00000176571|ENST00000518476|CNBD1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2773742675781	2	479.261259	956.507966	-1.0959	-0.0005252	-3.6797	-0.0017635	-4.7756	-0.0022887	479.2606025790606	84.633	0.61214	84.633	84.176	84.788	0					22	13	3	0	0	0	0.20789	1	7936	7936		20.947	4.4738	1	73311	+		53903	22136	35944	35959	61133	61133					0.027972046173204035
SHLPVQDPQVQ	11	Unmodified	_SHLPVQDPQVQ_					0	0	0		ENST00000425933.6_1_15:93595703-93616852:-|nuORF;ENST00000543599.5_1_15:93595703-93631593:-|nuORF	ENST00000425933.6_1_15:93595703-93616852:-|nuORF	ENST00000425933.6_1_15:93595703-93616852:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.2596740722656	3	416.55081	1246.6306	0.085759	3.5723E-05	-1.8204	-0.0007583	-1.7347	-0.00072258	416.8842411435682	27.615	0.65723	27.518	27.228	27.885	-0.096947					31	14	3	0	0	0	0.1751	1	1580	1580		12.433	0	1	64034			53904	11541	35945	35960	61134	61134					0.017149965580983917
SHLQAQLLRSL	11	Unmodified	_SHLQAQLLRSL_					0	0	0			REV__ENST00000397527.5_2_20:34043234-34046179:+|nuORF	REV__ENST00000397527.5_2_20:34043234-34046179:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.369140625	2	633.369861	1264.72517	1.5976	0.0010119	-2.7562	-0.0017457	-1.1585	-0.00073377	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.67568	1	11825	11825		32.751	0	1	10012000	+		53905	26169	35946	35961	61135	61135					0.1033955510006308
SHLRKAGT	8	Unmodified	_SHLRKAGT_					0	0	0		ENST00000502692.5_1_11:66313918-66328094:+|nuORF;nc|ENSG00000130402|O43707-3|ACTN4;ENST00000513398.1_1_11:66314411-66328094:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000072110|P12814|ACTN1;ENSG00000072110|ENST00000394419|ACTN1;nc|ENSG00000072110|P12814-4|ACTN1;nc|ENSG00000077522|P35609-2|ACTN2;ENSG00000077522|ENST00000366578|ACTN2;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;ENSG00000130402|ENST00000252699|ACTN4;ENSG00000248746|ENST00000513398|ACTN3	ENST00000502692.5_1_11:66313918-66328094:+|nuORF;nc|ENSG00000072110|P12814-2|ACTN1;nc|ENSG00000077522|P35609-2|ACTN2;ENST00000588618.5_1_19:39138385-39212431:+|nuORF;ENSG00000248746|ENST00000513398|ACTN3	nc|ENSG00000072110|P12814-2|ACTN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2513732910156	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.87064	1	7692	7692		29.15	2.3535	1	3322700			53906	1269;12860;1383;3644;8833	35947	35962	61136	61136					0.048394536773685104
SHLWQCPSRGW	11	Unmodified	_SHLWQCPSRGW_					0	0	0		nc|ENSG00000177675|Q9NR16-2|CD163L1;ENSG00000177675|ENST00000313599|CD163L1;nc|ENSG00000177675|Q9NR16-4|CD163L1	nc|ENSG00000177675|Q9NR16-2|CD163L1	nc|ENSG00000177675|Q9NR16-2|CD163L1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.8810119628906	3	452.880384	1355.61932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.731	1	17.11	16.61	17.61	-0.62141								0	0	0	0.56276	1	300	300		25.892	2.369	1				53907	7153	35948	35963	61137	61137					-0.04426104017056787
SHMGLIVIIIR	11	Unmodified	_SHMGLIVIIIR_					0	0	0			REV__ENSG00000180433|ENST00000641861|OR6K6	REV__ENSG00000180433|ENST00000641861|OR6K6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.383056640625	2	626.383926	1250.7533	-0.23126	-0.00014486	3.7308	0.0023369	3.4995	0.002192	626.3861440753458	111.34	0.20287	111.28	111.17	111.37	-0.059937					9	5	2	0	0	0	0.1745	1	12124	12124		5.2201	0	1	698940	+		53908	22398	35949	35964	61138	61138					0.13795161755820118
SHMRYVALL	9	Unmodified	_SHMRYVALL_					0	0	0			REV__ENSG00000203663|ENST00000641771|OR2L2	REV__ENSG00000203663|ENST00000641771|OR2L2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3169555664062	2	545.297319	1088.58008	-0.6448	-0.00035161	2.5597	0.0013958	1.9149	0.0010442	545.3000227261177	91.74	0.39095	91.74	91.633	92.024	0					11	8	2	0	0	0	0.20789	1	9006	9006		29.15	7.1897	1	76718	+		53909	23233	35950	35965	61139	61139					0.03933795699413167
SHNMTRLRKFM	11	Unmodified	_SHNMTRLRKFM_					0	0	0		ENSG00000249437|ENST00000517649|NAIP;ENST00000512908.2_1_5:70398727-70422449:-|nuORF;ENST00000315147.8_1_5:70265933-70281744:-|nuORF;ENST00000511830.2_1_5:69390488-69422514:-|nuORF;nc|ENSG00000249437|Q13075-2|NAIP	ENSG00000249437|ENST00000517649|NAIP	ENSG00000249437|ENST00000517649|NAIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.24774169921875	3	474.248191	1419.72274	-0.31598	-0.00014985	-0.43498	-0.00020629	-0.75096	-0.00035614	474.2479374225976	17.848	0.50885	17.772	17.587	18.096	-0.07671					49	19	4	0	0	0	0.75779	1	246	246		20.315	0.28454	1	318830			53910	8837	35951	35966	61140	61140					0.029670600991039464
SHNVAANV	8	Unmodified	_SHNVAANV_					0	0	0		ENSG00000149016|ENST00000476907|TUT1;ENST00000469480.1_1_11:62342568-62343792:-|nuORF	ENSG00000149016|ENST00000476907|TUT1	ENSG00000149016|ENST00000476907|TUT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2066345214844	2	406.206484	810.398415	0.92034	0.00037385	-0.43108	-0.00017511	0.48926	0.00019874	406.2061549713193	28.141	0.62433	27.886	27.454	28.078	-0.25465					19	14	2	0	0	0	0.8347	1	1698	1698		23.042	0	1	128410			53911	4991	35952	35967	61141	61141					-0.014368010020120892
SHPCWEPL	8	Unmodified	_SHPCWEPL_					0	0	0			REV__nc|ENSG00000278259|Q96H55-4|MYO19	REV__nc|ENSG00000278259|Q96H55-4|MYO19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7188720703125	2	484.71837	967.422187	-1.6647	-0.00080693	1.4087	0.00068281	-0.25606	-0.00012412	484.71886476647086	100.24	1.3318	100.42	99.843	101.18	0.17199					60	30	3	0	0	0	0.884	1	10430	10430		33.516	1.5607	1	492530	+		53912	24033	35953	35968	61142	61142					-0.06282703559850233
SHPHPAVV	8	Unmodified	_SHPHPAVV_					0	0	0		ENST00000609967.5_1_20:2732635-2739564:+|nuORF;ENSG00000088881|ENST00000609451|EBF4;nc|ENSG00000088881|Q9BQW3-1|EBF4	ENST00000609967.5_1_20:2732635-2739564:+|nuORF	ENST00000609967.5_1_20:2732635-2739564:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2274475097656	2	422.22722	842.439886	-0.15008	-6.3366E-05	1.8971	0.00080102	1.7471	0.00073766	422.2279211872398	56.283	1.5639	56.273	54.85	56.414	-0.010136					80	48	2	0	0	0	0.88915	1	5045	5045		35.201	0	1	747250			53913	1597	35954	35969	61143	61143					0.012363797573243573
SHPLTVFVTLT	11	Unmodified	_SHPLTVFVTLT_					0	0	0			REV__ENST00000504524.5_1_3:129275157-129277480:-|nuORF	REV__ENST00000504524.5_1_3:129275157-129277480:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.564453125	3	405.564168	1213.67067	-1.5858	-0.00064316	2.9135	0.0011816	1.3277	0.00053847	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.7434	1	5302	5302		21.032	5.1116	1	181560	+		53914	27862	35955	35970	61144	61144					0.0723854322866373
SHPMLRRA	8	Unmodified	_SHPMLRRA_					0	0	0		ENST00000452622.1_1_7:562147-562501:+|nuORF	ENST00000452622.1_1_7:562147-562501:+|nuORF	ENST00000452622.1_1_7:562147-562501:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.2781677246094	2	484.266353	966.518153	-1.6662	-0.00080688	1.2785	0.00061913	-0.38769	-0.00018775	484.26686038050906	95.2	0.86527	95.402	95.069	95.934	0.20242					33	20	2	0	0	0	0.4196	1	9772	9772		7.1934	0	1	116760			53915	11922	35956	35971	61145	61145					0.03355489070918338
SHPSPRPP	8	Unmodified	_SHPSPRPP_					0	0	0			REV__ENST00000539448.5_1_2:173940313-173955739:+|nuORF	REV__ENST00000539448.5_1_2:173940313-173955739:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.763427734375	2	437.730126	873.4457	1.7083	0.00074777	-2.6915	-0.0011782	-0.98325	-0.0004304	437.72880961394964	26.367	0.80959	26.334	25.983	26.792	-0.032125					38	17	3	0	0	0	0.4196	1	1144	1144		33.516	1.9858	1	136100	+		53916	28449	35957	35972	61146	61146					0.003914782690003449
SHQALTSSQDH	11	Unmodified	_SHQALTSSQDH_					0	0	0			REV__nc|ENSG00000090989|Q9NV70-2|EXOC1	REV__nc|ENSG00000090989|Q9NV70-2|EXOC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.7717895507812	2	605.77599	1209.53743	-0.024815	-1.5032E-05	-2.1515	-0.0013033	-2.1763	-0.0013184	605.774462948763	67.085	1.1656	67.636	67.246	68.412	0.55071					63	31	3	0	0	0	0.74763	1	7340	7340		22.58	1.6327	1	2325800	+		53917	17002	35958	35973	61147	61147					-0.05895927895130626
SHQDELPQKSP	11	Unmodified	_SHQDELPQKSP_					0	0	0			REV__ENST00000555070.1_1_14:89878823-90420935:-|nuORF	REV__ENST00000555070.1_1_14:89878823-90420935:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3687744140625	2	633.309666	1264.60478	1.4707	0.0009314	3.35	0.0021216	4.8207	0.003053	633.8133706666258	97.444	0.16503	97.675	97.532	97.697	0.23103					5	3	2	0	0	0	0.16123	1	10061	10061		37.508	0	1	64308	+		53918	28676	35959	35974	61148	61148					-0.016938976841856856
SHQFYILY	8	Unmodified	_SHQFYILY_					0	0	0			REV__chr9:95172147-95210999|14|17.79|0.02|9.77|-|1|FANCC,None|2	REV__chr9:95172147-95210999|14|17.79|0.02|9.77|-|1|FANCC,None|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	535.7667846679688	2	535.768917	1069.52328	-0.057165	-3.0627E-05	-3.7508	-0.0020096	-3.808	-0.0020402	535.7667893062957	35.999	0.86456	35.943	35.514	36.379	-0.055904					41	18	3	0	0	0	0.83456	1	2358	2358		60.972	7.6205	1	234410	+		53919	15939	35960	35975	61149	61149					-0.00869928585461821
SHQKGKPVPR	10	Unmodified	_SHQKGKPVPR_					0	0	0		ENSG00000188641|ENST00000370192|DPYD	ENSG00000188641|ENST00000370192|DPYD	ENSG00000188641|ENST00000370192|DPYD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3300170898438	2	567.330539	1132.64652	-1.2008	-0.00068122	0.41426	0.00023502	-0.78649	-0.0004462	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.8651	1	9341	9341		25.574	1.0549	1	5763000			53920	7944	35961	35976	61150	61150					0.0855074758567298
SHQKGKPVPR	10	Unmodified	_SHQKGKPVPR_					0	0	0		ENSG00000188641|ENST00000370192|DPYD	ENSG00000188641|ENST00000370192|DPYD	ENSG00000188641|ENST00000370192|DPYD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3298950195312	2	567.330539	1132.64652	-1.3957	-0.00079181	0.07479	4.2431E-05	-1.3209	-0.00074938	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86272	1	9430	9430		24.519	0	1	17338000			53921	7944	35961	35976	61151	61151					0.0855074758567298
SHQKKVPARI	10	Unmodified	_SHQKKVPARI_					0	0	0		ENST00000306801.7_1_17:78939591-78939999:+|nuORF	ENST00000306801.7_1_17:78939591-78939999:+|nuORF	ENST00000306801.7_1_17:78939591-78939999:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3523559570312	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.8486	2	12539	12539;12952		18.262	1.5447	1	3937500			53922	9864	35962	35977	61152;61153	61152					0.11863607136797327
SHQKLSQLQ	9	Unmodified	_SHQKLSQLQ_					0	0	0		ENSG00000163492|ENST00000443758|CCDC141;nc|ENSG00000163492|Q6ZP82-1|CCDC141	ENSG00000163492|ENST00000443758|CCDC141	ENSG00000163492|ENST00000443758|CCDC141	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	534.7958984375	2	534.793455	1067.57236	-0.062222	-3.3276E-05	3.6332	0.001943	3.5709	0.0019097	534.7953416148212	57.94	0.62413	58.02	57.808	58.433	0.079643					42	26	2	0	0	0	0.58668	1	4916	4916		47.657	1.6851	1	228900			53923	5807	35963	35978	61154	61154					0.041273597034887644
SHQRPSVKTLL	11	Unmodified	_SHQRPSVKTLL_					0	0	0		ENST00000416769.1_1_1:22356950-22357010:+|nuORF	ENST00000416769.1_1_1:22356950-22357010:+|nuORF	ENST00000416769.1_1_1:22356950-22357010:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5819396972656	3	422.582333	1264.72517	2.9692	0.0012547	-3.8305	-0.0016187	-0.86127	-0.00036396	422.58062707178027	97.728	3.629	97.776	96.312	99.941	0.048164					208	84	4	0	0	0	0.59831	1	10394	10394		44.639	5.8858	1	464700			53924	11400	35964	35979	61155	61155					0.10339555100085818
SHQRPSVKTLL	11	Unmodified	_SHQRPSVKTLL_					0	0	0		ENST00000416769.1_1_1:22356950-22357010:+|nuORF	ENST00000416769.1_1_1:22356950-22357010:+|nuORF	ENST00000416769.1_1_1:22356950-22357010:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	422.582333	1264.72517	1.8151	0.00076701	-2.5757	-0.0010884	-0.76066	-0.00032144	422.58109645144987	97.376	2.5875	97.761	96.613	99.2	0.38548	-0.049044	-0.0013828	NaN	44.639	129	62	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	265940			53925	11400	35964	35979							0.10339555100085818
SHQRPSVKTLL	11	Unmodified	_SHQRPSVKTLL_					0	0	0		ENST00000416769.1_1_1:22356950-22357010:+|nuORF	ENST00000416769.1_1_1:22356950-22357010:+|nuORF	ENST00000416769.1_1_1:22356950-22357010:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	422.582333	1264.72517	1.304	0.00055103	-2.2252	-0.00094031	-0.92119	-0.00038928	422.58134118594927	97.695	2.1391	98.085	96.863	99.002	0.39066	0.2752	-0.00093839	NaN	44.639	108	51	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410460			53926	11400	35964	35979							0.10339555100085818
SHQRRKRYF	9	Unmodified	_SHQRRKRYF_					0	0	0			REV__ENSG00000170396|ENST00000302277|ZNF804A	REV__ENSG00000170396|ENST00000302277|ZNF804A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3466186523438	2	639.352337	1276.69012	2.7367	0.0017497	-4.2943	-0.0027455	-1.5575	-0.0009958	639.8521280059866	103.12	0.16705	103.07	102.99	103.16	-0.047005					6	3	2	0	0	0	0.20789	1	11296	11296		51.335	14.889	1	138540	+		53927	21657	35965	35980	61156	61156					0.06284357082790848
SHQSQLTAF	9	Unmodified	_SHQSQLTAF_					0	0	0		ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	ENSG00000119285|ENST00000366582|HEATR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.2452087402344	2	509.751256	1017.48796	-0.45557	-0.00023223	0.016217	8.2668E-06	-0.43935	-0.00022396	509.7511381869462	45.568	0.80136	45.58	45.28	46.081	0.012058					37	21	2	0	0	0	0.77546	1	3266	3266		31.955	0	1	640980			53928	3059	35966	35981	61157	61157					-0.020085911132923684
SHQTVQLRHSK	11	Unmodified	_SHQTVQLRHSK_					0	0	0			REV__nc|ENSG00000185133|Q15735-3|INPP5J	REV__nc|ENSG00000185133|Q15735-3|INPP5J	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.9087829589844	3	440.90922	1319.70583	-0.38907	-0.00017155	0.60603	0.0002672	0.21695	9.5656E-05	440.9093719490249	15.473	0.2338	15.393	15.3	15.534	-0.080017					23	9	4	0	0	0	0.66858	1	23	23		36.528	3.4885	1	498720	+		53929	22739	35967	35982	61158	61158					0.05876598809186362
SHQTVQLRHSK	11	Unmodified	_SHQTVQLRHSK_					0	0	0			REV__nc|ENSG00000185133|Q15735-3|INPP5J	REV__nc|ENSG00000185133|Q15735-3|INPP5J	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.9094543457031	3	440.90922	1319.70583	0.020445	9.0143E-06	0.21491	9.4757E-05	0.23536	0.00010377	440.9091802029252	15.399	0.17952	15.457	15.369	15.548	0.057872					18	6	4	0	0	0	0.54689	1	27	27		48.602	14.515	1	201610	+		53930	22739	35967	35982	61159	61159					0.05876598809186362
SHQTVQLRHSK	11	Unmodified	_SHQTVQLRHSK_					0	0	0			REV__nc|ENSG00000185133|Q15735-3|INPP5J	REV__nc|ENSG00000185133|Q15735-3|INPP5J	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	440.90922	1319.70583	-0.38907	-0.00017155	0.60603	0.0002672	0.21695	9.5656E-05	440.9093719490249	15.473	0.2338	15.393	15.3	15.534	-0.080017	-0.0026018	0.00045324	NaN	48.602	23	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	498720	+		53931	22739	35967	35982							0.05876598809186362
SHQWMCKLFG	10	Unmodified	_SHQWMCKLFG_					0	0	0			REV__ENST00000395184.5_1_4:86396313-86396598:+|nuORF	REV__ENST00000395184.5_1_4:86396313-86396598:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.779296875	3	412.859933	1235.55797	-0.13535	-5.588E-05	-2.5993	-0.0010731	-2.7346	-0.001129	412.85871815475525	29.55	0.606	29.521	29.3	29.906	-0.029207					28	13	3	0	0	0	0.37624	1	1847	1847		19.263	0	1	128110	+		53932	26100	35968	35983	61160	61160					-0.050387520406957265
SHRAAPALRPR	11	Unmodified	_SHRAAPALRPR_					0	0	0		ENSG00000135862|ENST00000258341|LAMC1	ENSG00000135862|ENST00000258341|LAMC1	ENSG00000135862|ENST00000258341|LAMC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.2442626953125	3	411.242533	1230.70577	3.0375	0.0012491	-0.036851	-1.5155E-05	3.0006	0.001234	411.57688383383635	102.95	0.67481	103.25	103.07	103.74	0.29865					29	20	2	0	0	0	0.72374	1	12576	12576		27.644	3.4121	1	2406800			53933	4059	35969	35984	61161	61161					0.0996464359982383
SHRCIGRIVKV	11	Unmodified	_SHRCIGRIVKV_					0	0	0			REV__ENST00000499966.1_1_16:66442590-66442689:+|nuORF	REV__ENST00000499966.1_1_16:66442590-66442689:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3773803710938	2	634.374423	1266.73429	1.4924	0.00094672	2.1049	0.0013353	3.5973	0.002282	634.3756362582708	111.65	0.59207	111.76	111.45	112.04	0.11118					53	17	5	0	0	0	0.66929	1	12025	12025		36.447	2.5251	1	27955000	+		53934	27803	35970	35985	61162	61162					0.11159625184745892
SHRFYPSDLK	10	Unmodified	_SHRFYPSDLK_					0	0	0			REV__ENSG00000112787|ENST00000680143|FBRSL1	REV__ENSG00000112787|ENST00000680143|FBRSL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	625.3251342773438	2	625.319837	1248.62512	0.59733	0.00037352	-0.23219	-0.0001452	0.36514	0.00022833	625.3195366547585	64.365	0.91222	64.489	64.125	65.038	0.12397					75	31	3	0	0	0	0.54701	1	5720	5720		52.937	1.744	1	317080	+		53935	17966	35971	35986	61163	61163					0.010753177662763846
SHRLPRLFLL	10	Unmodified	_SHRLPRLFLL_					0	0	0		ENST00000556716.5_1_14:21485757-21486740:-|nuORF	ENST00000556716.5_1_14:21485757-21486740:-|nuORF	ENST00000556716.5_1_14:21485757-21486740:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.383056640625	2	626.387857	1250.76116	-0.23113	-0.00014477	-1.0606	-0.00066438	-1.2918	-0.00080915	626.387161632221	117.62	0.31653	117.55	117.34	117.65	-0.07531					19	10	2	0	0	0	0.37624	1	12601	12601		19.104	0	1	448560			53936	13754	35972	35987	61164	61164					0.14581057067607617
SHRLVTKS	8	Unmodified	_SHRLVTKS_					0	0	0			REV__ENST00000459908.5_1_13:113439469-113512287:+|nuORF	REV__ENST00000459908.5_1_13:113439469-113512287:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2525329589844	2	464.272158	926.529764	0.33053	0.00015345	-0.64583	-0.00029984	-0.31531	-0.00014639	464.27170353532074	87.722	1.5627	87.775	86.951	88.514	0.053032					60	36	3	0	0	0	0.4196	1	8871	8871		9.7057	0	1	167150	+		53937	16561	35973	35988	61165	61165					0.06356009365890714
SHRNVVSVHI	10	Unmodified	_SHRNVVSVHI_					0	0	0		CON__ENSEMBL:ENSBTAP00000016046	CON__ENSEMBL:ENSBTAP00000016046	CON__ENSEMBL:ENSBTAP00000016046	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.3139038085938	2	574.320171	1146.62579	0.034664	1.9908E-05	-1.1815	-0.00067859	-1.1469	-0.00065868	574.3193857134044	94.348	3.3565	94.783	93.636	96.992	0.43539					170	83	3	0	0	0	0.8545	1	11329	11329		36.447	4.9169	1	972590		+	53938	564	35974	35989	61166	61166					0.0583415720600442
SHRRKKLR	8	Unmodified	_SHRRKKLR_					0	0	0		ENST00000378535.4_1_12:88890181-88890376:-|nuORF	ENST00000378535.4_1_12:88890181-88890376:-|nuORF	ENST00000378535.4_1_12:88890181-88890376:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.8528442382812	2	540.84669	1079.67883	-0.040077	-2.1676E-05	3.5722	0.001932	3.5321	0.0019103	541.3508546297437	15.872	0.44422	15.919	15.759	16.203	0.047803					21	18	2	0	0	0	0.81548	1	81	81		20.482	1.1219	1	46516			53939	10867	35975	35990	61167	61167					0.1421757977930156
SHRRKKLR	8	Unmodified	_SHRRKKLR_					0	0	0		ENST00000378535.4_1_12:88890181-88890376:-|nuORF	ENST00000378535.4_1_12:88890181-88890376:-|nuORF	ENST00000378535.4_1_12:88890181-88890376:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	540.84669	1079.67883	0.12121	6.5557E-05	1.7476	0.0009452	1.8688	0.0010108	540.8481463321444	15.926	0.13641	15.985	15.899	16.035	0.059268	0.032902	-0.00080883	NaN	20.482	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58799			53940	10867	35975	35990							0.1421757977930156
SHRRKRSRSI	10	Unmodified	_SHRRKRSRSI_					0	0	0		ENST00000519583.5_1_5:178044267-178044471:-|nuORF;ENST00000520199.5_1_5:178044267-178054033:-|nuORF;ENST00000520878.5_1_5:178030620-178044471:-|nuORF;ENSG00000113240|ENST00000316308|CLK4	ENST00000519583.5_1_5:178044267-178044471:-|nuORF	ENST00000519583.5_1_5:178044267-178044471:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8816528320312	2	641.881793	1281.74903	-0.076643	-4.9196E-05	1.1811	0.00075816	1.1045	0.00070896	641.8824265545632	96.25	1.6726	96.25	95.357	97.03	0					110	38	3	0	0	0	0.85981	1	9661	9661		35.152	4.8343	1	839370			53941	2706	35976	35991	61168	61168					0.11942833377133866
SHRRRRKRKR	10	Unmodified	_SHRRRRKRKR_					0	0	0		chr12:6839140-6839327|13|73.31|0.76|6.6|+|1|P3H3,None|1	chr12:6839140-6839327|13|73.31|0.76|6.6|+|1|P3H3,None|1	chr12:6839140-6839327|13|73.31|0.76|6.6|+|1|P3H3,None|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2774353027344	3	479.306642	1434.8981	0.62806	0.00030103	4.0208	0.0019272	4.6488	0.0022282	479.64208127723765	83.589	0.21771	83.735	83.657	83.874	0.14695					6	4	2	0	0	0	0.37624	1	8115	8115		14.694	5.4819	1	40158			53942	142	35977	35992	61169	61169					0.19804403790521974
SHRRRRKRKR	10	Unmodified	_SHRRRRKRKR_					0	0	0		chr12:6839140-6839327|13|73.31|0.76|6.6|+|1|P3H3,None|1	chr12:6839140-6839327|13|73.31|0.76|6.6|+|1|P3H3,None|1	chr12:6839140-6839327|13|73.31|0.76|6.6|+|1|P3H3,None|1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	479.306642	1434.8981	-1.5209	-0.000729	5.5789	0.002674	4.058	0.001945	479.3098027490621	83.381	0.1312	83.519	83.438	83.569	0.13811	-0.10825	0.0012599	NaN	14.694	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19362			53943	142	35977	35992							0.19804403790521974
SHSFLPTVGT	10	Unmodified	_SHSFLPTVGT_					0	0	0		nc|ENSG00000215440|Q8NDH3-3|NPEPL1;ENST00000529976.5_1_20:57268807-57287813:+|nuORF	nc|ENSG00000215440|Q8NDH3-3|NPEPL1	nc|ENSG00000215440|Q8NDH3-3|NPEPL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3033447265625	2	523.269281	1044.52401	-0.1763	-9.225E-05	4.4055	0.0023053	4.2293	0.002213	523.2716610979489	89.09	0.21301	89.298	89.128	89.341	0.20731					6	4	2	0	0	0	0.37624	1	8860	8860		32.812	2.3088	1	71362			53944	15254	35978	35993	61170	61170					0.0035286606357658457
SHSKFEEM	8	Unmodified	_SHSKFEEM_					0	0	0			REV__ENSG00000197808|ENST00000588268|ZNF461	REV__ENSG00000197808|ENST00000588268|ZNF461	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.7151184082031	2	497.718567	993.422581	-2.2579	-0.0011238	-0.93862	-0.00046717	-3.1965	-0.001591	497.7180484243651	35.798	0.86988	35.807	35.295	36.165	0.0092812					33	18	2	0	0	0	0.89043	1	2260	2260		35.618	10.044	1	33097	+		53945	23271	35979	35994	61171	61171					-0.07439328630630371
SHSKFEEM	8	Unmodified	_SHSKFEEM_					0	0	0			REV__ENSG00000197808|ENST00000588268|ZNF461	REV__ENSG00000197808|ENST00000588268|ZNF461	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	497.718567	993.422581	-0.02864	-1.4254E-05	-3.0159	-0.0015011	-3.0445	-0.0015153	497.7168076773115	35.869	0.68523	35.857	35.517	36.202	-0.012199	-0.096254	-0.00063734	NaN	35.618	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33165	+		53946	23271	35979	35994							-0.07439328630630371
SHSKFEEM	8	Unmodified	_SHSKFEEM_					0	0	0			REV__ENSG00000197808|ENST00000588268|ZNF461	REV__ENSG00000197808|ENST00000588268|ZNF461	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	497.718567	993.422581	-0.66953	-0.00033324	-2.6307	-0.0013093	-3.3002	-0.0016426	497.7172270727407	35.942	0.81543	35.887	35.385	36.2	-0.055904	-0.066344	-0.00025385	NaN	35.618	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51250	+		53947	23271	35979	35994							-0.07439328630630371
SHSKFEEM	8	Unmodified	_SHSKFEEM_					0	0	0			REV__ENSG00000197808|ENST00000588268|ZNF461	REV__ENSG00000197808|ENST00000588268|ZNF461	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	497.718567	993.422581	-2.2579	-0.0011238	-0.93862	-0.00046717	-3.1965	-0.001591	497.7180484243651	35.798	0.86988	35.807	35.295	36.165	0.0092812	-0.14557	0.0014305	NaN	35.618	33	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33097	+		53948	23271	35979	35994							-0.07439328630630371
SHSKFEEM	8	Unmodified	_SHSKFEEM_					0	0	0			REV__ENSG00000197808|ENST00000588268|ZNF461	REV__ENSG00000197808|ENST00000588268|ZNF461	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	497.718567	993.422581	-0.65047	-0.00032375	-5.9256	-0.0029493	-6.5761	-0.0032731	497.7149312882061	36.089	0.34064	36.12	35.894	36.235	0.031132	0.16762	-0.0035338	NaN	35.618	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62225	+		53949	23271	35979	35994							-0.07439328630630371
SHSKFEEM	8	Unmodified	_SHSKFEEM_					0	0	0			REV__ENSG00000197808|ENST00000588268|ZNF461	REV__ENSG00000197808|ENST00000588268|ZNF461	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	497.718567	993.422581	0.22185	0.00011042	-7.0375	-0.0035027	-6.8156	-0.0033923	497.71454650236234	36.154	0.14801	36.093	36.015	36.163	-0.060333	0.14055	-0.0046406	NaN	35.618	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44115	+		53950	23271	35979	35994							-0.07439328630630371
SHSKVVEKI	9	Unmodified	_SHSKVVEKI_					0	0	0			REV__ENSG00000139826|ENST00000375898|ABHD13	REV__ENSG00000139826|ENST00000375898|ABHD13	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.7733154296875	2	513.800749	1025.58694	1.3222	0.00067935	-0.1845	-9.4795E-05	1.1377	0.00058456	513.7999133169124	23.508	0.30498	22.933	22.747	23.052	-0.57415					9	6	2	0	0	0	0.20789	1	1066	1066		24.519	0	1	41899	+		53951	19572	35980	35995	61172	61172					0.07517431851624679
SHSPLVLLFES	11	Unmodified	_SHSPLVLLFES_					0	0	0		ENST00000426595.1_1_7:55973974-55979318:+|nuORF	ENST00000426595.1_1_7:55973974-55979318:+|nuORF	ENST00000426595.1_1_7:55973974-55979318:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	410.2222595214844	3	410.223923	1227.64994	0.034876	1.4307E-05	-1.728	-0.00070887	-1.6931	-0.00069456	410.22312463603447	23.2	0.4737	23.294	23.081	23.555	0.094501					41	22	2	0	0	0	0.74405	1	736	736		23.378	0	1	123240			53952	11557	35981	35996	61173	61173					0.0452195284899517
SHSRHSVKVK	10	Unmodified	_SHSRHSVKVK_					0	0	0			REV__ENSG00000180198|ENST00000683442|RCC1	REV__ENSG00000180198|ENST00000683442|RCC1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.834228515625	2	582.833446	1163.65234	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.377	1	16.297	15.797	16.797	-0.080017								0	0	0	0.45132	1	109	109		15.642	0	1		+		53953	22380	35982	35997	61174	61174					0.07705846097314861
SHSRSRSRNK	10	Unmodified	_SHSRSRSRNK_					0	0	0			REV__ENST00000487773.1_1_2:38972277-38975875:-|nuORF	REV__ENST00000487773.1_1_2:38972277-38975875:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.5525207519531	3	405.553548	1213.63881	0.59269	0.00024037	-3.055	-0.001239	-2.4623	-0.0009986	405.5523269463935	28.869	3.2114	28.696	27.713	30.924	-0.17336					183	75	5	0	0	0	0.8545	1	1825	1825		34.087	9.8106	1	9724600	+		53954	26614	35983	35998	61175	61175					0.04053988318105439
SHSSSAFAL	9	Unmodified	_SHSSSAFAL_					0	0	0			REV__ENST00000398341.7_1_21:43938514-43945908:+|nuORF	REV__ENST00000398341.7_1_21:43938514-43945908:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7195129394531	2	453.719424	905.424296	-0.6208	-0.00028167	1.7102	0.00077595	1.0894	0.00049428	453.7201197333413	32.703	0.76672	32.829	32.546	33.313	0.12643					35	17	3	0	0	0	0.39977	1	2315	2315		57.811	0.35863	1	462450	+		53955	26199	35984	35999	61176	61176					-0.032199515503748444
SHSSSAFAL	9	Unmodified	_SHSSSAFAL_					0	0	0			REV__ENST00000398341.7_1_21:43938514-43945908:+|nuORF	REV__ENST00000398341.7_1_21:43938514-43945908:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7203063964844	2	453.719424	905.424296	0.8235	0.00037364	0.30671	0.00013916	1.1302	0.0005128	453.7194513691515	32.7	0.63437	32.911	32.636	33.271	0.21168					33	14	3	0	0	0	0.47272	1	2344	2344		53.351	5.4358	1	537980	+		53956	26199	35984	35999	61177	61177					-0.032199515503748444
SHSYSSSL	8	Unmodified	_SHSYSSSL_					0	0	0			REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.19598388671875	2	434.195782	866.377011	1.8663	0.00081033	-1.3277	-0.00057649	0.53856	0.00023384	434.19507963943687	24.164	0.90636	23.65	23.238	24.144	-0.51365					45	20	3	0	0	0	0.41376	1	1153	1153		79.939	0	1	948290	+		53957	18180	35985	36000	61178	61178					-0.061522308213625365
SHTHPPSPPS	10	Unmodified	_SHTHPPSPPS_					0	0	0		nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;ENSG00000133816|ENST00000683283|MICAL2	nc|ENSG00000133816|O94851|MICAL2	nc|ENSG00000133816|O94851|MICAL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7940063476562	2	522.24888	1042.48321	-0.1234	-6.4445E-05	0.69873	0.00036491	0.57533	0.00030047	522.2486001632748	27.9	0.34851	27.803	27.663	28.011	-0.096945					10	7	2	0	0	0	0.37624	1	1668	1668		51.335	41.63	1	34035			53958	14929	35986	36001	61179	61179					-0.03633475256037855
SHTHPPSPPS	10	Unmodified	_SHTHPPSPPS_					0	0	0		nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;ENSG00000133816|ENST00000683283|MICAL2	nc|ENSG00000133816|O94851|MICAL2	nc|ENSG00000133816|O94851|MICAL2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	522.24888	1042.48321	1.1725	0.00061235	-1.8938	-0.00098904	-0.72128	-0.00037669	522.247717857809	27.997	0.4332	27.743	27.543	27.976	-0.25465	-0.030198	-0.0010129	NaN	34.173	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62599			53959	14929	35986	36001							-0.03633475256037855
SHTKGGYLLS	10	Unmodified	_SHTKGGYLLS_					0	0	0		ENST00000483837.1_1_22:41936547-41940441:-|nuORF	ENST00000483837.1_1_22:41936547-41940441:-|nuORF	ENST00000483837.1_1_22:41936547-41940441:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.7823486328125	2	531.782556	1061.55056	-0.45981	-0.00024452	0.04954	2.6344E-05	-0.41027	-0.00021817	531.7825831037422	29.277	2.7619	29.248	28.206	30.968	-0.029207					186	63	5	0	0	0	0.64457	1	1887	1887		47.657	1.6851	1	10622000			53960	12525	35987	36002	61180	61180					0.022245549549097632
SHVKCILI	8	Unmodified	_SHVKCILI_					0	0	0			REV__chr5:32417792-32444229|16|10.5|0.28|5.24|-|2|ZFR,ZFR|1	REV__chr5:32417792-32444229|16|10.5|0.28|5.24|-|2|ZFR,ZFR|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7723693847656	2	456.770406	911.526258	0.92135	0.00042084	3.6029	0.0016457	4.5243	0.0020666	456.77176380852353	89.91	2.1934	89.958	88.794	90.987	0.048164					112	51	4	0	0	0	0.89494	1	9320	9320		37.159	4.3467	1	1119200	+		53961	15854	35988	36003	61181	61181					0.06695623267694373
SHVTEQMH	8	Unmodified	_SHVTEQMH_					0	0	0			REV__nc|ENSG00000116885|Q8WVF1-4|OSCP1	REV__nc|ENSG00000116885|Q8WVF1-4|OSCP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7182922363281	2	484.716359	967.418164	1.6171	0.00078385	2.2868	0.0011084	3.9039	0.0018923	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.92457	1	11663	11663		47.916	0.25827	1	7541600	+		53962	29798	35989	36004	61182	61182					-0.06684793053534577
SHVTEQMH	8	Unmodified	_SHVTEQMH_					0	0	0			REV__nc|ENSG00000116885|Q8WVF1-4|OSCP1	REV__nc|ENSG00000116885|Q8WVF1-4|OSCP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.71856689453125	2	484.716359	967.418164	1.7202	0.00083382	1.1811	0.00057251	2.9014	0.0014063	484.71724999015095	100.07	1.5114	100.41	100.06	101.57	0.33295					128	39	5	0	0	0	0.91977	1	12143	12143		45.952	3.5558	1	10028000	+		53963	29798	35989	36004	61183	61183					-0.06684793053534577
SHWIRLKMKP	10	Unmodified	_SHWIRLKMKP_					0	0	0		nc|ENSG00000074755|O43149-3|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;ENSG00000074755|ENST00000381638|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.2557373046875	3	432.58502	1294.73323	-0.16973	-7.3421E-05	2.418	0.001046	2.2483	0.00097256	432.9214749561437	107.41	0.45335	107.38	107.29	107.75	-0.034409					17	10	2	0	0	0	0.37624	1	11691	11691		10.104	0	1	171630			53964	1313	35990	36005	61184	61184					0.09765410815839459
SIAAARPTPK	10	Unmodified	_SIAAARPTPK_					0	0	0			REV__ENST00000359172.3_1_1:110551665-110553925:+|nuORF	REV__ENST00000359172.3_1_1:110551665-110553925:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3011779785156	2	506.300916	1010.58728	-0.41166	-0.00020842	0.75262	0.00038105	0.34097	0.00017263	506.3013167893661	96.275	1.2816	96.506	95.928	97.21	0.23103					78	29	3	0	0	0	0.86698	1	9914	9914		28.081	0.19925	1	550160	+		53965	25452	35991	36006	61185	61185					0.0824085157147465
SIAAFLVL	8	Unmodified	_SIAAFLVL_					0	0	0		ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1	ENSG00000139641|ENST00000394048|ESYT1	ENSG00000139641|ENST00000394048|ESYT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2583923339844	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.82464	1	543	543		21.702	0	1	679020			53966	4386	35992	36007	61186	61186					0.08288775879520927
SIAGPAGLYL	10	Unmodified	_SIAGPAGLYL_					0	0	0			REV__ENSG00000163539|ENST00000682230|CLASP2	REV__ENSG00000163539|ENST00000682230|CLASP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	481.271484375	2	481.271293	960.528032	-0.8812	-0.00042409	2.4204	0.0011649	1.5392	0.00074077	481.2720850416632	53.447	0.9183	54.062	53.696	54.614	0.61436					45	21	3	0	0	0	0.5766	1	5427	5427		51.335	5.3632	1	586260	+		53967	20931	35993	36008	61187	61187					0.04618955557270965
SIAGPAGLYL	10	Unmodified	_SIAGPAGLYL_					0	0	0			REV__ENSG00000163539|ENST00000682230|CLASP2	REV__ENSG00000163539|ENST00000682230|CLASP2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	481.271293	960.528032	0.75442	0.00036308	0.41981	0.00020204	1.1742	0.00056513	481.2714070348657	53.854	0.83774	54.268	53.827	54.665	0.4139	0.10327	-0.00095213	NaN	51.335	33	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	327020	+		53968	20931	35993	36008							0.04618955557270965
SIAGPAGLYL	10	Unmodified	_SIAGPAGLYL_					0	0	0			REV__ENSG00000163539|ENST00000682230|CLASP2	REV__ENSG00000163539|ENST00000682230|CLASP2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	481.271293	960.528032	-0.8812	-0.00042409	2.4204	0.0011649	1.5392	0.00074077	481.2720850416632	53.447	0.9183	54.062	53.696	54.614	0.61436	-0.10327	0.00097351	NaN	51.335	45	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	586260	+		53969	20931	35993	36008							0.04618955557270965
SIAKKAPP	8	Unmodified	_SIAKKAPP_					0	0	0			REV__nc|ENSG00000204472|P55008-2|AIF1	REV__nc|ENSG00000204472|P55008-2|AIF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2571105957031	2	406.255446	810.496338	-0.45135	-0.00018336	4.2955	0.0017451	3.8442	0.0015617	406.2571064964768	46.486	2.3438	46.407	45.139	47.483	-0.079006					113	66	3	0	0	0	0.85277	1	3418	3418		25.45	2.4077	1	691740	+		53970	23496	35994	36009	61188	61188					0.08351007593989834
SIAKKAPP	8	Unmodified	_SIAKKAPP_					0	0	0			REV__nc|ENSG00000204472|P55008-2|AIF1	REV__nc|ENSG00000204472|P55008-2|AIF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2581481933594	2	406.255446	810.496338	-0.55606	-0.0002259	4.4394	0.0018035	3.8834	0.0015776	406.2571374022724	49.642	1.9177	49.549	48.335	50.252	-0.093178					107	46	3	0	0	0	0.81548	1	3879	3879		20.482	1.1219	1	334920	+		53971	23496	35994	36009	61189	61189					0.08351007593989834
SIAKKVAAVYT	11	Unmodified	_SIAKKVAAVYT_					0	0	0			REV__ENSG00000155629|ENST00000339364|PIK3AP1	REV__ENSG00000155629|ENST00000339364|PIK3AP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8431396484375	2	575.845156	1149.67576	-0.99796	-0.00057467	-2.8602	-0.001647	-3.8582	-0.0022217	575.8433464319414	90.672	2.8412	90.741	88.754	91.595	0.069328					215	67	4	0	0	0	0.7434	1	9151	9151		23.523	0.94304	1	1885000	+		53972	20435	35995	36010	61190	61190					0.10690847091291289
SIAKLSTVM	9	Oxidation (M)	_SIAKLSTVM(Oxidation (M))_		SIAKLSTVM(1)		SIAKLSTVM(93)	0	0	1			REV__ENST00000038176.7_1_8:59496457-59496520:-|nuORF	REV__ENST00000038176.7_1_8:59496457-59496520:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.26885986328125	2	483.270435	964.526318	-0.79087	-0.00038221	-2.3652	-0.001143	-3.156	-0.0015252	483.269114465979	57.44	0.98806	57.834	57.411	58.399	0.39407					62	24	4	0	0	0	0.096131	2	6004	5945;6004		93.195	31.088	1	3790800	+		53973	24063	35996	36011	61191;61192	61192		375			0.04263578477025476
SIAKLSTVM	9	Oxidation (M)	_SIAKLSTVM(Oxidation (M))_		SIAKLSTVM(1)		SIAKLSTVM(110)	0	0	1			REV__ENST00000038176.7_1_8:59496457-59496520:-|nuORF	REV__ENST00000038176.7_1_8:59496457-59496520:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.2684326171875	2	483.270435	964.526318	0.15939	7.7029E-05	-3.3842	-0.0016355	-3.2248	-0.0015585	483.2686398073137	57.331	1.4006	57.886	57.438	58.839	0.55512					68	34	4	0	0	0	0.049188	3	5996	5947;5996;6010		108.09	25.847	1	3840500	+		53974	24063	35996	36011	61193;61194;61195	61194		375			0.04263578477025476
SIALLPLAA	9	Unmodified	_SIALLPLAA_					0	0	0			REV__nc|ENSG00000091622|Q9BZ71-3|PITPNM3	REV__nc|ENSG00000091622|Q9BZ71-3|PITPNM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7794494628906	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.7932	1	3410	3410		17.365	2.7009	1	2165200	+		53975	17020	35997	36012	61196	61196					0.10388447425270897
SIALTAYT	8	Unmodified	_SIALTAYT_					0	0	0		nc|ENSG00000152683|Q6NXT4-4|SLC30A6;nc|ENSG00000152683|Q6NXT4-3|SLC30A6;ENSG00000152683|ENST00000282587|SLC30A6;nc|ENSG00000152683|Q6NXT4-2|SLC30A6	nc|ENSG00000152683|Q6NXT4-4|SLC30A6	nc|ENSG00000152683|Q6NXT4-4|SLC30A6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.226806640625	2	420.229094	838.443634	-1.3082	-0.00054975	-1.524	-0.00064043	-2.8322	-0.0011902	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.87922	1	7130	7130		31.955	1.4512	1	419890			53976	5192	35998	36013	61197	61197					0.017950047405179248
SIALTAYT	8	Unmodified	_SIALTAYT_					0	0	0		nc|ENSG00000152683|Q6NXT4-4|SLC30A6;nc|ENSG00000152683|Q6NXT4-3|SLC30A6;ENSG00000152683|ENST00000282587|SLC30A6;nc|ENSG00000152683|Q6NXT4-2|SLC30A6	nc|ENSG00000152683|Q6NXT4-4|SLC30A6	nc|ENSG00000152683|Q6NXT4-4|SLC30A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2276306152344	2	420.229094	838.443634	0.089833	3.775E-05	-2.9174	-0.001226	-2.8276	-0.0011882	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.91005	1	7973	7973		42.474	1.9018	1	888480			53977	5192	35998	36013	61198	61198					0.017950047405179248
SIALTAYT	8	Unmodified	_SIALTAYT_					0	0	0		nc|ENSG00000152683|Q6NXT4-4|SLC30A6;nc|ENSG00000152683|Q6NXT4-3|SLC30A6;ENSG00000152683|ENST00000282587|SLC30A6;nc|ENSG00000152683|Q6NXT4-2|SLC30A6	nc|ENSG00000152683|Q6NXT4-4|SLC30A6	nc|ENSG00000152683|Q6NXT4-4|SLC30A6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2270812988281	2	420.229094	838.443634	-1.4714	-0.00061832	-1.5274	-0.00064185	-2.9988	-0.0012602	420.22834377301643	76.819	2.0914	76.909	74.945	77.036	0.089363					112	66	2	0	0	0	0.85277	1	7044	7044		25.45	0	1	246920			53978	5192	35998	36013	61199	61199					0.017950047405179248
SIANSLLR	8	Unmodified	_SIANSLLR_					0	0	0			REV__ENSG00000198742|ENST00000361368|SMURF1	REV__ENSG00000198742|ENST00000361368|SMURF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2593078613281	2	437.261259	872.507966	0.38317	0.00016754	-0.14147	-6.1861E-05	0.24169	0.00010568	437.26108819056486	23.205	0.57295	22.786	22.544	23.116	-0.41879					21	13	2	0	0	0	0.87479	1	1012	1012		30.504	1.3541	1	85058	+		53979	23371	35999	36014	61200	61200					0.0666120461733044
SIANSLLR	8	Unmodified	_SIANSLLR_					0	0	0			REV__ENSG00000198742|ENST00000361368|SMURF1	REV__ENSG00000198742|ENST00000361368|SMURF1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	437.261259	872.507966	1.0835	0.00047376	-1.1702	-0.00051167	-0.086708	-3.7914E-05	437.2606368298501	23.193	0.48314	22.619	22.436	22.92	-0.57415	-0.083797	-0.00069807	NaN	30.504	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99203	+		53980	23371	35999	36014							0.0666120461733044
SIAPIMDMIL	10	Oxidation (M)	_SIAPIM(Oxidation (M))DMIL_		SIAPIM(0.88)DM(0.12)IL		SIAPIM(8.7)DM(-8.7)IL	0	0	1			REV__nc|ENSG00000135372|Q9H0A0-2|NAT10	REV__nc|ENSG00000135372|Q9H0A0-2|NAT10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.2884521484375	2	560.293053	1118.57155	-0.11663	-6.5344E-05	0.58568	0.00032815	0.46906	0.00026281	560.2933678221074	28.363	0.49067	28.266	28.011	28.502	-0.096945					21	11	2	0	0	0	0.6116	1	1703	1703		49.442	8.0149	2	132890	+		53981	19213	36000	36015	61201	61201		284			0.017010609478802508
SIASLIQIPL	10	Unmodified	_SIASLIQIPL_					0	0	0			REV__ENSG00000185156|ENST00000329805|MFSD6L	REV__ENSG00000185156|ENST00000329805|MFSD6L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7927856445312	2	527.828975	1053.6434	1.0397	0.00054878	-4.2485	-0.0022425	-3.2088	-0.0016937	528.326874003173	36.643	1.4026	36.924	36.229	37.632	0.28173					50	33	2	0	0	0	0.37624	1	2800	2800		60.118	14.146	1	376770	+		53982	22741	36001	36016	61202	61202					0.11872059688289482
SIASLIQIPL	10	Unmodified	_SIASLIQIPL_					0	0	0			REV__ENSG00000185156|ENST00000329805|MFSD6L	REV__ENSG00000185156|ENST00000329805|MFSD6L	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	527.828975	1053.6434	1.5131	0.00079867	-4.3551	-0.0022988	-2.842	-0.0015001	528.3266737293256	36.506	1.001	36.947	36.615	37.616	0.44043	0.01116	-5.9928E-05	NaN	60.118	47	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	446600	+		53983	22741	36001	36016							0.11872059688289482
SIASTEAALG	10	Unmodified	_SIASTEAALG_					0	0	0			REV__ENSG00000110987|ENST00000261822|BCL7A	REV__ENSG00000110987|ENST00000261822|BCL7A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.2397155761719	2	460.24019	918.465826	-0.87904	-0.00040457	1.3085	0.00060221	0.42942	0.00019764	460.2406355194744	27.262	0.92603	27.087	26.658	27.584	-0.17559					41	20	3	0	0	0	0.81018	1	1566	1566		38.806	0	1	288190	+		53984	17843	36002	36017	61203	61203					0.0033318441829806034
SIAVKLFKFSR	11	Unmodified	_SIAVKLFKFSR_					0	0	0		ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3910522460938	2	648.395348	1294.77614	0.024155	1.5662E-05	-4.0311	-0.0026138	-4.007	-0.0025981	648.3927913840552	106.64	2.0197	106.64	104.87	106.89	0					89	46	4	0	0	0	0.70737	1	11026	11026		30.318	5.7985	1	6259100			53985	6566	36003	36018	61204	61204					0.14054504144928615
SIAVKLFKFSR	11	Unmodified	_SIAVKLFKFSR_					0	0	0		ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.392578125	2	648.395348	1294.77614	0.024154	1.5661E-05	-3.7072	-0.0024038	-3.6831	-0.0023881	648.3928433509174	107.73	1.0319	107.73	106.84	107.87	0					93	24	4	0	0	0	0.7144	1	11119	11119		29.17	2.1227	1	35129000			53986	6566	36003	36018	61205	61205					0.14054504144928615
SIAVKLFKFSR	11	Unmodified	_SIAVKLFKFSR_					0	0	0		ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.392822265625	2	648.395348	1294.77614	-0.0023385	-1.5163E-06	-3.8153	-0.0024738	-3.8177	-0.0024754	648.3927201405174	107.38	1.0747	107.34	106.86	107.93	-0.034409					97	25	4	0	0	0	0.67778	1	11637	11637		35.152	8.4591	1	36844000			53987	6566	36003	36018	61206	61206					0.14054504144928615
SIAVKLFKFSR	11	Unmodified	_SIAVKLFKFSR_					0	0	0		ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	ENSG00000170214|ENST00000306675|ADRA1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3928833007812	2	648.395348	1294.77614	-1.1413	-0.00074001	-2.4279	-0.0015742	-3.5692	-0.0023142	648.3936534392657	107.12	0.99413	107.16	106.63	107.62	0.036118					92	23	4	0	0	0	0.70737	1	11474	11474		30.318	1.1477	1	53885000			53988	6566	36003	36018	61207	61207					0.14054504144928615
SICVVFKN	8	Unmodified	_SICVVFKN_					0	0	0		ENST00000496441.5_1_2:174219691-174228743:+|nuORF;nc|ENSG00000144354|Q9BWT1-4|CDCA7	ENST00000496441.5_1_2:174219691-174228743:+|nuORF	ENST00000496441.5_1_2:174219691-174228743:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	455.24871826171875	2	455.246763	908.478974	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.888	1	52.864	52.364	53.364	-0.023849								0	0	0	0.3055	1	4698	4698		44.117	3.5442	1				53989	12784	36004	36019	61208	61208					0.021073439966812657
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26318359375	2	438.263468	874.512382	-1.2142	-0.00053214	0.66524	0.00029155	-0.54896	-0.00024059	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.86677	1	3146	3146		27.882	2.3082	1	4828000	+		53990	20187	36005	36020	61209	61209					0.07010669040244011
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633056640625	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.89494	1	2537	2537		37.159	4.3467	1	2361100	+		53991	20187	36005	36020	61210	61210					0.07010669040244011
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2628173828125	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.88185	1	3359	3359		32.812	0.85756	1	4268300	+		53992	20187	36005	36020	61211	61211					0.07010669040244011
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26336669921875	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.91472	1	1885	1885		44.117	1.2525	1	11160000	+		53993	20187	36005	36020	61212	61212					0.07010669040244011
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2627868652344	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.93293	1	2547	2547		51.335	3.6781	1	22924000	+		53994	20187	36005	36020	61213	61213					0.07010669040244011
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26287841796875	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.87064	2	2575	2516;2575		40.778	2.3535	1	22029000	+		53995	20187	36005	36020	61214;61215	61215					0.07010669040244011
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2632751464844	2	438.263468	874.512382	0.037237	1.632E-05	-0.30418	-0.00013331	-0.26694	-0.00011699	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.86677	1	2016	2016		27.882	1.1893	1	10667000	+		53996	20187	36005	36020	61216	61216					0.07010669040244011
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26239013671875	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.89043	2	2641	2582;2641		37.159	1.9584	1	21381000	+		53997	20187	36005	36020	61217;61218	61218					0.07010669040244011
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2635803222656	2	438.263468	874.512382	0.27759	0.00012166	-1.0434	-0.00045727	-0.76577	-0.00033561	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.89043	4	2641	2641;2689;2737;2785		45.952	5.5774	1	85249000	+		53998	20187	36005	36020	61219;61220;61221;61222	61219					0.07010669040244011
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26300048828125	2	438.263468	874.512382	-2.4769	-0.0010856	0.22797	9.991E-05	-2.249	-0.00098564	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.89494	2	3721	3553;3721		49.442	11.63	1	246320000	+		53999	20187	36005	36020	61223;61224	61224					0.07010669040244011
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2632141113281	2	438.263468	874.512382	1.5783	0.00069171	-2.4144	-0.0010581	-0.83609	-0.00036643	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.89043	2	2653	2629;2653		44.117	8.4985	1	92475000	+		54000	20187	36005	36020	61225;61226	61226					0.07010669040244011
SIDKSVKV	8	Unmodified	_SIDKSVKV_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2615051269531	2	438.263468	874.512382	-1.2747	-0.00055866	-0.66852	-0.00029299	-1.9432	-0.00085165	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.86677	1	3445	3445		27.882	2.3082	1	219150000	+		54001	20187	36005	36020	61227	61227					0.07010669040244011
SIEEYIVLQ	9	Unmodified	_SIEEYIVLQ_					0	0	0			REV__ENSG00000187754|ENST00000298181|SSX7	REV__ENSG00000187754|ENST00000298181|SSX7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.2922973632812	2	547.292422	1092.57029	-0.74665	-0.00040864	1.4248	0.00077979	0.67815	0.00037115	547.2931024634125	60.058	0.61252	60.611	60.279	60.891	0.55323					27	16	2	0	0	0	0.58668	1	6358	6358		47.657	6.8792	1	539020	+		54002	22942	36006	36021	61228	61228					0.0277088617501704
SIEEYIVLQ	9	Unmodified	_SIEEYIVLQ_					0	0	0			REV__ENSG00000187754|ENST00000298181|SSX7	REV__ENSG00000187754|ENST00000298181|SSX7	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	547.292422	1092.57029	-0.74665	-0.00040864	1.4248	0.00077979	0.67815	0.00037115	547.2931024634125	60.058	0.61252	60.611	60.279	60.891	0.55323	0.00065274	-0.00071505	NaN	47.657	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	539020	+		54003	22942	36006	36021							0.0277088617501704
SIERQGRLPN	10	Unmodified	_SIERQGRLPN_					0	0	0			REV__ENST00000357325.9_1_1:156711975-156712116:-|nuORF	REV__ENST00000357325.9_1_1:156711975-156712116:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.3275146484375	2	585.322911	1168.63127	-1.6605	-0.00097193	4.1112	0.0024064	2.4507	0.0014345	585.3254129056655	59.604	0.79423	59.995	59.651	60.445	0.39077					42	19	3	0	0	0	0.57924	1	6295	6295		51.193	3.5354	1	541780	+		54004	25409	36007	36022	61229	61229					0.05369835997817063
SIFIVQLW	8	Unmodified	_SIFIVQLW_					0	0	0			REV__nc|ENSG00000148842|Q9H8M5-3|CNNM2	REV__nc|ENSG00000148842|Q9H8M5-3|CNNM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	503.79437255859375	2	503.292028	1004.5695	-1.6043	-0.00080741	0.58655	0.00029521	-1.0177	-0.0005122	503.29217405547223	109.68	1.349	109.69	109.36	110.71	0.0060425					102	50	3	0	0	0	0.86288	1	11734	11734		26.796	1.222	1	1381900	+		54005	20141	36008	36023	61230	61230					0.06740136316591361
SIFKQKRVK	9	Unmodified	_SIFKQKRVK_					0	0	0		nc|ENSG00000115155|Q9HC10-5|OTOF;ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-2|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF	nc|ENSG00000115155|Q9HC10-5|OTOF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3623657226562	2	567.361308	1132.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.552	1	57.632	57.132	58.132	0.079643								0	0	0	0.30778	1	4872	4872		27.882	2.3082	1				54006	2814;14858	36009	36024	61231	61231					0.14701679284939928
SIFLYLKWRVK	11	Unmodified	_SIFLYLKWRVK_					0	0	0		ENSG00000212127|ENST00000537503|TAS2R14	ENSG00000212127|ENST00000537503|TAS2R14	ENSG00000212127|ENST00000537503|TAS2R14	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.97479248046875	3	484.962374	1451.86529	0.06665	3.2323E-05	-0.035319	-1.7128E-05	0.031332	1.5195E-05	484.9622754284381	16.322	0.29915	16.382	16.232	16.531	0.059269					23	13	2	0	0	0	0.17955	1	151	151		17.833	0	1	208440			54007	8570	36010	36025	61232	61232					0.157433391044151
SIFSKFTSK	9	Unmodified	_SIFSKFTSK_					0	0	0		nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;ENSG00000072518|ENST00000402010|MARK2;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2	nc|ENSG00000072518|Q7KZI7-12|MARK2	nc|ENSG00000072518|Q7KZI7-12|MARK2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7848510742188	2	522.78985	1043.56515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.295	1	45.758	45.258	46.258	0.46313								0	0	0	0.12595	1	4203	4203		74.165	5.6803	1				54008	1278	36011	36026	61233	61233					0.04510627103036313
SIFSKFTSK	9	Unmodified	_SIFSKFTSK_					0	0	0		nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;ENSG00000072518|ENST00000402010|MARK2;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2	nc|ENSG00000072518|Q7KZI7-12|MARK2	nc|ENSG00000072518|Q7KZI7-12|MARK2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7877807617188	2	522.78985	1043.56515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.363	1	45.826	45.326	46.326	0.46313								0	0	0	0.16738	1	4213	4213		70.816	6.6089	1				54009	1278	36011	36026	61234	61234					0.04510627103036313
SIFSKFTSK	9	Unmodified	_SIFSKFTSK_					0	0	0		nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;ENSG00000072518|ENST00000402010|MARK2;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2	nc|ENSG00000072518|Q7KZI7-12|MARK2	nc|ENSG00000072518|Q7KZI7-12|MARK2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7890625	2	522.78985	1043.56515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.449	1	45.912	45.412	46.412	0.46313								0	0	0	0.078451	1	4226	4226		80.455	11.668	1				54010	1278	36011	36026	61235	61235					0.04510627103036313
SIGARLKVST	10	Unmodified	_SIGARLKVST_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3126831054688	2	516.314023	1030.61349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.604	1	19.534	19.034	20.034	-0.070013								0	0	0	0.45132	1	439	439		23.523	0	1		+		54011	20437;29946	36012	36027	61236	61236					0.09941120742928433
SIGLEFLIGL	10	Unmodified	_SIGLEFLIGL_					0	0	0			REV__ENST00000496524.5_1_2:110902031-110920682:-|nuORF	REV__ENST00000496524.5_1_2:110902031-110920682:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3185424804688	2	531.3157	1060.61685	2.5638	0.0013622	4.2767	0.0022723	6.8404	0.0036344	531.3177191515188	95.1	2.5434	95.042	94.557	97.1	-0.057526					188	59	5	0	0	0	0.80179	3	10121	10121;10146;10158		39.253	6.4404	1	4072600	+		54012	19872	36013	36028	61237;61238;61239	61237					0.0889637079694694
SIGLIMKHK	9	Unmodified	_SIGLIMKHK_					0	0	0		ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21;ENST00000547806.1_1_12:117592072-117595814:-|nuORF	ENSG00000135108|ENST00000622495|FBXO21	ENSG00000135108|ENST00000622495|FBXO21	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.808349609375	2	513.810062	1025.60557	-1.4174	-0.00072826	-0.72923	-0.00037469	-2.1466	-0.0011029	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.7932	1	4055	4055		21.96	1.4781	1	1977600			54013	3984	36014	36029	61240	61240					0.09379270221802471
SIGLRVPFV	9	Unmodified	_SIGLRVPFV_					0	0	0		ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3009338378906	2	494.302927	986.591301	-0.67103	-0.00033169	-3.8062	-0.0018814	-4.4772	-0.0022131	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.74721	1	10330	10330		37.159	5.2042	1	54981000			54014	3560	36015	36030	61241	61241					0.09746941065179726
SIGLRVPFV	9	Unmodified	_SIGLRVPFV_					0	0	0		ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3006591796875	2	494.302927	986.591301	-1.6335	-0.00080746	-2.893	-0.00143	-4.5265	-0.0022375	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.78983	1	9992	9992		27.882	1.1893	1	46933000			54015	3560	36015	36030	61242	61242					0.09746941065179726
SIGPKIKM	8	Unmodified	_SIGPKIKM_					0	0	0			REV__ENST00000523958.5_1_8:23291828-23307413:-|nuORF	REV__ENST00000523958.5_1_8:23291828-23307413:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26568603515625	2	437.264956	872.515359	0.51664	0.00022591	1.2835	0.00056123	1.8001	0.00078714	437.26538540238977	22.419	1.3051	22.41	21.975	23.28	-0.0088234					141	67	4	0	0	0	0.89962	1	683	683		38.806	1.647	1	1945900	+		54016	23209	36016	36031	61243	61243					0.0740022089340755
SIGRDYLSPFY	11	Unmodified	_SIGRDYLSPFY_					0	0	0			REV__nc|nan|Q3C1V1-2|C11orf91	REV__nc|nan|Q3C1V1-2|C11orf91	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.885986328125	3	439.88731	1316.6401	-0.32244	-0.00014184	-2.6042	-0.0011456	-2.9266	-0.0012874	439.8861485081008	32.569	1.5036	32.515	32.104	33.608	-0.05434					106	35	5	0	0	0	0.75121	1	1960	1960		21.78	0	1	1366300	+		54017	23543	36017	36032	61244	61244					-0.005552351563892444
SIGVTQILAM	10	Unmodified	_SIGVTQILAM_					0	0	0		nc|ENSG00000106025|O95859-2|TSPAN12;ENSG00000106025|ENST00000222747|TSPAN12	nc|ENSG00000106025|O95859-2|TSPAN12	nc|ENSG00000106025|O95859-2|TSPAN12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7933349609375	2	516.791535	1031.56852	0.70992	0.00036688	3.0022	0.0015515	3.7121	0.0019184	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.86047	1	8777	8777		23.523	0.48021	1	842420			54018	2275	36018	36033	61245	61245					0.05399553885399655
SIHPITHPT	9	Unmodified	_SIHPITHPT_					0	0	0		ENST00000280800.4_1_12:113827935-113828904:+|nuORF	ENST00000280800.4_1_12:113827935-113828904:+|nuORF	ENST00000280800.4_1_12:113827935-113828904:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2903137207031	2	501.771991	1001.52943	-0.9452	-0.00047428	-3.3408	-0.0016763	-4.286	-0.0021506	501.7708437984015	86.965	0.77687	86.965	86.343	87.119	0					20	17	2	0	0	0	0.20789	1	8293	8293		20.947	5.3051	1	65884			54019	9625	36019	36034	61246	61246					0.028725896460287004
SIHPITHPT	9	Unmodified	_SIHPITHPT_					0	0	0		ENST00000280800.4_1_12:113827935-113828904:+|nuORF	ENST00000280800.4_1_12:113827935-113828904:+|nuORF	ENST00000280800.4_1_12:113827935-113828904:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2901306152344	2	501.771991	1001.52943	-0.064159	-3.2193E-05	-2.2348	-0.0011214	-2.299	-0.0011536	502.2732436741763	84.943	0.39342	85.011	84.723	85.117	0.067177					10	8	2	0	0	0	0.20789	1	8493	8493		16.473	0	1	49488			54020	9625	36019	36034	61247	61247					0.028725896460287004
SIHSLCTSHY	10	Unmodified	_SIHSLCTSHY_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.8193969726562	2	574.263673	1146.51279	2.2435	0.0012883	4.0337	0.0023164	6.2771	0.0036047	574.2658965677341	100.66	1.0313	101.01	100.49	101.52	0.3459					33	25	2	0	0	0	0.37624	1	12166	12166		32.812	14.55	1	153170			54021	8074	36020	36035	61248	61248					-0.05460279302201343
SIHVSGPVTPT	11	Unmodified	_SIHVSGPVTPT_					0	0	0			REV__ENST00000370272.8_1_1:93811487-93811679:+|nuORF	REV__ENST00000370272.8_1_1:93811487-93811679:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.7952880859375	2	547.795663	1093.57677	-0.51915	-0.00028439	0.57038	0.00031245	0.051234	2.8066E-05	547.7957749077788	35.605	0.86988	35.614	35.295	36.165	0.0092773					39	18	3	0	0	0	0.65746	1	2252	2252		37.812	0	1	196450	+		54022	25648	36021	36036	61249	61249					0.03372824126381602
SIIATKGFGIN	11	Unmodified	_SIIATKGFGIN_					0	0	0			REV__nc|ENSG00000170921|Q9HCD6-3|TANC2	REV__nc|ENSG00000170921|Q9HCD6-3|TANC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.81982421875	2	560.821681	1119.62881	-1.4169	-0.00079462	-1.874	-0.001051	-3.2909	-0.0018456	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.7144	1	9317	9317		29.17	1.2878	1	758020	+		54023	21698	36022	36037	61250	61250					0.07377987540144204
SIICKPKRRH	10	Unmodified	_SIICKPKRRH_					0	0	0			REV__ENST00000488482.1_1_10:91403596-91403683:-|nuORF	REV__ENST00000488482.1_1_10:91403596-91403683:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.3694458007812	2	619.369141	1236.72373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.753	1	15.811	15.311	16.311	0.057872								0	0	0	0.45132	1	71	71		19.997	0.89325	1		+		54024	27594	36023	36038	61251	61251					0.11483642530333782
SIIGLEEEVI	10	Unmodified	_SIIGLEEEVI_					0	0	0			REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.306396484375	2	551.305529	1100.59651	-0.64986	-0.00035827	1.6543	0.000912	1.0044	0.00055373	551.3062723835128	64.068	0.78235	64.067	63.719	64.502	-0.00078583					57	26	3	0	0	0	0.8608	1	5981	5981		34.173	4.331	1	381510	+		54025	19515	36024	36039	61252	61252					0.05023155346475505
SIIGLFLFI	9	Unmodified	_SIIGLFLFI_					0	0	0			REV__nc|ENSG00000005471|P21439-3|ABCB4	REV__nc|ENSG00000005471|P21439-3|ABCB4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.323486328125	2	511.817879	1021.6212	4.821	0.0024675	0.82737	0.00042346	5.6484	0.0028909	511.81835696750153	106.63	0.49855	106.78	106.57	107.07	0.14929					37	20	2	0	0	0	0.7932	1	13034	13034		25.45	6.0902	1	185590	+		54026	16087	36025	36040	61253	61253					0.11125880010501987
SIIGNKAFTDI	11	Unmodified	_SIIGNKAFTDI_					0	0	0		nc|ENSG00000152582|Q9C093-4|SPEF2	nc|ENSG00000152582|Q9C093-4|SPEF2	nc|ENSG00000152582|Q9C093-4|SPEF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.8245239257812	2	589.824421	1177.63429	-2.728	-0.001609	3.1004	0.0018287	0.37245	0.00021968	589.8259139608214	36.628	0.5368	36.64	36.391	36.928	0.011173					17	11	2	0	0	0	0.68532	1	2392	2392		33.922	2.3918	1	69714			54027	14996	36026	36041	61254	61254					0.05257666331931432
SIIGNWLQNK	10	Unmodified	_SIIGNWLQNK_					0	0	0			REV__ENST00000456504.5_1_15:94858078-95022260:+|nuORF	REV__ENST00000456504.5_1_15:94858078-95022260:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	586.823486328125	2	586.824755	1171.63496	-0.35782	-0.00020998	-1.4226	-0.0008348	-1.7804	-0.0010448	586.8237768221713	110.28	1.7008	110.31	110.06	111.76	0.031738					152	59	5	0	0	0	0.8608	1	12081	12081		34.173	1.3601	1	6766000	+		54028	19631	36027	36042	61255	61255					0.056005057716674855
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.3122253417969	2	500.313492	998.612431	-0.53339	-0.00026686	0.64897	0.00032469	0.11558	5.7824E-05	500.31352313312107	78.706	0.69234	78.833	78.542	79.235	0.12695					47	19	3	0	0	0	0.29259	1	7432	7432		65.465	5.3471	1	162420			54029	6774	36028	36043	61256	61256					0.11306906374034043
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.3132019042969	2	500.313492	998.612431	-1.2878	-0.00064428	1.1774	0.00058906	-0.11036	-5.5215E-05	500.31397417451893	78.74	0.56955	78.834	78.567	79.136	0.0942					38	16	3	0	0	0	0.39367	1	7397	7397		58.23	5.2932	1	206800			54030	6774	36028	36043	61257	61257					0.11306906374034043
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	500.313492	998.612431	-1.0677	-0.00053421	0.485	0.00024265	-0.58274	-0.00029155	500.31353303725825	78.988	0.51968	78.988	78.733	79.253	0	0.15263	-0.00010389	NaN	65.465	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86142			54031	6774	36028	36043							0.11306906374034043
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	500.313492	998.612431	-0.067045	-3.3543E-05	0.32346	0.00016183	0.25642	0.00012829	500.3131242254033	78.851	0.48366	78.908	78.718	79.202	0.056114	0.07237	-0.00026554	NaN	65.465	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68814			54032	6774	36028	36043							0.11306906374034043
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	500.313492	998.612431	0.20017	0.00010015	-0.15294	-7.6516E-05	0.047236	2.3633E-05	500.3132939665993	78.987	0.51817	78.934	78.715	79.233	-0.053558	0.098539	-0.00074223	NaN	65.465	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60083			54033	6774	36028	36043							0.11306906374034043
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	500.313492	998.612431	-0.9419	-0.00047125	0.75047	0.00037547	-0.19143	-9.5775E-05	500.313567143911	78.835	0.57417	78.886	78.615	79.19	0.051682	0.051156	0.00016174	NaN	65.465	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80108			54034	6774	36028	36043							0.11306906374034043
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	500.313492	998.612431	-0.46991	-0.0002351	-0.27944	-0.00013981	-0.74935	-0.00037491	500.3131064049767	78.216	0.41543	78.621	78.424	78.839	0.40531	-0.21422	-0.00086881	NaN	65.465	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135400			54035	6774	36028	36043							0.11306906374034043
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	500.313492	998.612431	0.049586	2.4808E-05	-0.33437	-0.00016729	-0.28479	-0.00014248	500.3129339772262	78.094	0.53279	78.657	78.335	78.868	0.56332	-0.17817	-0.00092378	NaN	65.465	23	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	256100			54036	6774	36028	36043							0.11306906374034043
SIKDALANCLE	11	Unmodified	_SIKDALANCLE_					0	0	0			REV__nc|ENSG00000137474|Q13402-5|MYO7A	REV__nc|ENSG00000137474|Q13402-5|MYO7A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.75732421875	2	588.800088	1175.58562	-0.86268	-0.00050794	-2.5505	-0.0015018	-3.4132	-0.0020097	588.798510010724	56.405	0.44024	56.801	56.632	57.072	0.39672					14	9	2	0	0	0	0.17527	1	5809	5809		47.96	15.209	1	275050	+		54037	19385	36029	36044	61258	61258					0.004854297005294939
SIKELSVSDC	10	Unmodified	_SIKELSVSDC_					0	0	0		nc|ENSG00000183580|Q9UJT9-2|FBXL7;ENSG00000183580|ENST00000504595|FBXL7	nc|ENSG00000183580|Q9UJT9-2|FBXL7	nc|ENSG00000183580|Q9UJT9-2|FBXL7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.7647705078125	2	540.765714	1079.51688	0.010632	5.7495E-06	-2.2224	-0.0012018	-2.2117	-0.001196	540.7642196802963	49.772	0.81682	49.798	49.331	50.148	0.025574					32	20	2	0	0	0	0.82886	1	3876	3876		37.812	2.6108	1	155480			54038	7543	36030	36045	61259	61259					-0.01970234599161813
SIKFTIFYVP	10	Unmodified	_SIKFTIFYVP_					0	0	0		ENST00000297185.7_1_5:137891485-137891557:-|nuORF	ENST00000297185.7_1_5:137891485-137891557:-|nuORF	ENST00000297185.7_1_5:137891485-137891557:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5643310546875	3	405.565509	1213.6747	1.5319	0.00062128	-3.4035	-0.0013803	-1.8716	-0.00075905	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.86802	1	5929	5929		27.047	11.041	1	245170			54039	9757	36031	36046	61260	61260					0.07640632722359442
SIKGGRRTCY	10	Unmodified	_SIKGGRRTCY_					0	0	0			REV__ENST00000431543.6_1_6:112575248-112575670:-|nuORF	REV__ENST00000431543.6_1_6:112575248-112575670:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.7705078125	2	570.800757	1139.58696	-1.0297	-0.00058777	-0.81175	-0.00046335	-1.8415	-0.0010511	570.8003237661702	58.863	0.74854	59.255	58.736	59.485	0.39209					32	17	2	0	0	0	0.37624	1	6111	6111		19.997	0	1	510860	+		54040	26620	36032	36047	61261	61261					0.02275108579942753
SIKKKFLKRK	10	Unmodified	_SIKKKFLKRK_					0	0	0		nc|ENSG00000181090|Q9H9B1-4|EHMT1;ENST00000371394.6_1_9:140611085-140686569:+|nuORF;nc|ENSG00000181090|Q9H9B1-3|EHMT1;ENSG00000181090|ENST00000460843|EHMT1	nc|ENSG00000181090|Q9H9B1-4|EHMT1	nc|ENSG00000181090|Q9H9B1-4|EHMT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.630859375	3	425.958963	1274.85506	0.16001	6.8158E-05	0.68892	0.00029345	0.84893	0.00036161	425.95896786355036	84.207	3.1038	84.654	82.367	85.471	0.44736					139	75	2	0	0	0	0.37624	1	9536	9536		15.333	8.6735	1	893390			54041	7372	36033	36048	61262	61262					0.22862776169881727
SIKKRKKRR	9	Unmodified	_SIKKRKKRR_					0	0	0			REV__ENSG00000147679|ENST00000309822|UTP23	REV__ENSG00000147679|ENST00000309822|UTP23	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	599.8028564453125	2	600.412198	1198.80984	0.14097	8.4641E-05	2.0798	0.0012487	2.2208	0.0013334	600.9148364351925	83.694	0.90982	84.129	83.834	84.744	0.43537					27	21	2	0	0	0	0.20789	1	9725	9725		11.511	2.8173	1	101270	+		54042	20084	36034	36049	61263	61263					0.21838970427347704
SILAAVLVEP	10	Unmodified	_SILAAVLVEP_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2;ENSG00000159961|ENST00000641141|OR3A3;nc|ENSG00000159961|P47888|OR3A3;ENSG00000180090|ENST00000323404|OR3A1	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.3087158203125	2	506.307875	1010.6012	-2.0618	-0.0010439	4.0707	0.002061	2.0089	0.0010171	506.3097854879906	39.644	1.6042	39.654	38.716	40.32	0.0092812					68	37	3	0	0	0	0.86218	1	2781	2781		32.812	2.3088	1	97666			54043	8677	36035	36050	61264	61264					0.0963208427989457
SILAYATT	8	Unmodified	_SILAYATT_					0	0	0			REV__nc|ENSG00000138079|Q07837-3|SLC3A1	REV__nc|ENSG00000138079|Q07837-3|SLC3A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.227294921875	2	420.229094	838.443634	-1.3082	-0.00054975	-1.524	-0.00064043	-2.8322	-0.0011902	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.87064	1	7175	7175		29.15	4.6455	1	419890	+		54044	29882	36036	36051	61265	61265					0.017950047405179248
SILCRCRT	8	Unmodified	_SILCRCRT_					0	0	0			REV__ENST00000358181.8_1_17:7804222-7804258:+|nuORF	REV__ENST00000358181.8_1_17:7804222-7804258:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.2491455078125	2	476.246772	950.478991	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.768	1	30.766	30.266	31.266	-0.0022526								0	0	0	0.29452	1	1374	1374		33.516	0.70317	1		+		54045	25427	36037	36052	61266	61266					0.001770207250274325
SILGCLLTLL	10	Unmodified	_SILGCLLTLL_					0	0	0		ENSG00000112902|ENST00000382496|SEMA5A	ENSG00000112902|ENST00000382496|SEMA5A	ENSG00000112902|ENST00000382496|SEMA5A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3033447265625	2	523.319928	1044.6253	-0.17473	-9.1438E-05	-3.4226	-0.0017911	-3.5973	-0.0018825	523.3178339509338	89.026	0.25603	89.234	89.128	89.384	0.20731					7	5	2	0	0	0	0.37624	1	8860	8860		31.53	6.0796	1	110480			54046	2687	36038	36053	61267	61267					0.10477601441903062
SILGPLLMN	9	Unmodified	_SILGPLLMN_					0	0	0			REV__ENST00000357164.3_1_5:150647668-150647734:+|nuORF	REV__ENST00000357164.3_1_5:150647668-150647734:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27752685546875	2	479.275521	956.536489	0.83201	0.00039876	3.0426	0.0014583	3.8747	0.001857	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.77244	1	8662	8662		32.812	2.3088	1	7289200	+		54047	25407	36039	36054	61268	61268					0.05648186202256511
SILKQLTRQ	9	Unmodified	_SILKQLTRQ_					0	0	0			REV__ENST00000485984.1_1_1:3389348-3394597:+|nuORF;REV__ENSG00000130762|ENST00000378378|ARHGEF16	REV__ENST00000485984.1_1_1:3389348-3394597:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.8352661132812	2	543.835123	1085.65569	-0.012703	-6.9082E-06	-0.04543	-2.4706E-05	-0.058133	-3.1615E-05	543.8349141593202	17.498	0.33389	17.015	16.898	17.232	-0.48256					16	7	3	0	0	0	0.69624	1	274	274		40.778	0	1	261160	+		54048	27537;18903	36040	36055	61269	61269					0.11629096151295926
SILKQLTRQ	9	Unmodified	_SILKQLTRQ_					0	0	0			REV__ENST00000485984.1_1_1:3389348-3394597:+|nuORF;REV__ENSG00000130762|ENST00000378378|ARHGEF16	REV__ENST00000485984.1_1_1:3389348-3394597:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.8341064453125	2	543.835123	1085.65569	-0.016287	-8.8572E-06	-0.15929	-8.663E-05	-0.17558	-9.5487E-05	543.834814827704	17.604	0.31365	16.993	16.844	17.157	-0.6107					16	7	3	0	0	0	0.19818	1	289	289		74.255	0	1	212590	+		54049	27537;18903	36040	36055	61270	61270					0.11629096151295926
SILPFPPSAKN	11	Unmodified	_SILPFPPSAKN_					0	0	0			REV__nc|ENSG00000072415|Q8N3R9-2|PALS1	REV__nc|ENSG00000072415|Q8N3R9-2|PALS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	585.8298950195312	2	585.829506	1169.64446	0.49853	0.00029205	0.81855	0.00047953	1.3171	0.00077158	585.8298665984416	57.52	1.1205	57.626	57.378	58.498	0.1055					94	54	2	0	0	0	0.72106	1	4868	4868		28.081	4.5588	1	190780	+		54050	16646	36041	36056	61271	61271					0.06642274057185205
SILPGVSDL	9	Unmodified	_SILPGVSDL_					0	0	0		ENST00000216968.4_1_20:33764858-33765056:+|nuORF	ENST00000216968.4_1_20:33764858-33765056:+|nuORF	ENST00000216968.4_1_20:33764858-33765056:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.7537536621094	2	450.755475	899.496398	0.09033	4.0717E-05	-2.9549	-0.0013319	-2.8646	-0.0012912	450.75407309968915	81.514	3.65	82.013	80.71	84.36	0.49967					142	88	2	0	0	0	0.78536	1	9416	9416		29.15	0	1	344880			54051	9147	36042	36057	61272	61272					0.0426296280331826
SILPGVSDL	9	Unmodified	_SILPGVSDL_					0	0	0		ENST00000216968.4_1_20:33764858-33765056:+|nuORF	ENST00000216968.4_1_20:33764858-33765056:+|nuORF	ENST00000216968.4_1_20:33764858-33765056:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	450.755475	899.496398	-1.0589	-0.00047732	-1.8206	-0.00082063	-2.8795	-0.001298	450.7545867195614	81.652	3.5209	82.078	80.769	84.29	0.42645	0.032633	0.00061731	NaN	29.15	121	85	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	255720			54052	9147	36042	36057							0.0426296280331826
SILQQTPR	8	Unmodified	_SILQQTPR_					0	0	0		nc|ENSG00000134762|Q14574-2|DSC3;ENSG00000134762|ENST00000360428|DSC3	nc|ENSG00000134762|Q14574-2|DSC3	nc|ENSG00000134762|Q14574-2|DSC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.7720947265625	2	471.771991	941.529429	-0.19914	-9.3949E-05	-0.44384	-0.00020939	-0.64298	-0.00030334	471.7718032420007	32.184	0.81778	32.31	31.988	32.805	0.12643					30	18	2	0	0	0	0.92394	1	2251	2251		47.657	0	1	672510			54053	3956	36043	36058	61273	61273					0.05632589646040742
SILRLHVGA	9	Unmodified	_SILRLHVGA_					0	0	0		ENST00000397872.5_1_22:29949444-29949504:-|nuORF	ENST00000397872.5_1_22:29949444-29949504:-|nuORF	ENST00000397872.5_1_22:29949444-29949504:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.7455139160156	2	483.298176	964.581799	0.065899	3.1849E-05	-1.0391	-0.00050219	-0.97319	-0.00047034	483.29738342764637	31.717	0.59839	31.824	31.548	32.146	0.10707					21	13	2	0	0	0	0.20789	1	2163	2163		27.882	4.8398	1	128490			54054	11163	36044	36059	61274	61274					0.09809172779648634
SILTISRHG	9	Unmodified	_SILTISRHG_					0	0	0		ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENSG00000166986|ENST00000262027|MARS1;ENST00000551805.1_1_12:57908749-57909143:+|nuORF	ENST00000537638.6_1_12:57905855-57911076:+|nuORF	ENST00000537638.6_1_12:57905855-57911076:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2867736816406	2	492.285266	982.555979	1.6804	0.00082722	1.7616	0.0008672	3.442	0.0016944	492.28670249740594	110.53	1.1679	110.59	110.07	111.24	0.054062					79	40	3	0	0	0	0.76255	1	13429	13429		35.618	0	1	260830			54055	6257	36045	36060	61275	61275					0.06400278537375925
SILTLTLPV	9	Unmodified	_SILTLTLPV_					0	0	0			REV__ENSG00000256188|ENST00000539585|TAS2R30	REV__ENSG00000256188|ENST00000539585|TAS2R30	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8038635253906	2	478.804968	955.595384	-1.2382	-0.00059286	1.4969	0.00071673	0.2587	0.00012387	478.80558529591235	40.624	1.0284	40.581	39.923	40.951	-0.042892					45	26	2	0	0	0	0.76764	1	2961	2961		34.173	2.2177	1	267990	+		54056	23906	36046	36061	61276	61276					0.11580985768227947
SILTLTLPV	9	Unmodified	_SILTLTLPV_					0	0	0			REV__ENSG00000256188|ENST00000539585|TAS2R30	REV__ENSG00000256188|ENST00000539585|TAS2R30	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8050537109375	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.588	1	42.593	42.093	43.093	0.0054741								0	0	0	0.33676	1	2874	2874		18.324	0.95945	1		+		54057	23906	36046	36061	61277	61277					0.11580985768227947
SILTLTLPV	9	Unmodified	_SILTLTLPV_					0	0	0			REV__ENSG00000256188|ENST00000539585|TAS2R30	REV__ENSG00000256188|ENST00000539585|TAS2R30	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	478.804968	955.595384	-0.92233	-0.00044162	2.0534	0.00098317	1.1311	0.00054155	478.8057713642185	40.528	0.94245	40.532	40.111	41.054	0.0043983	-0.0093303	0.00022895	NaN	34.173	47	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	213120	+		54058	23906	36046	36061							0.11580985768227947
SILTLTLPV	9	Unmodified	_SILTLTLPV_					0	0	0			REV__ENSG00000256188|ENST00000539585|TAS2R30	REV__ENSG00000256188|ENST00000539585|TAS2R30	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	478.804968	955.595384	-2.1913	-0.0010492	2.7461	0.0013148	0.55482	0.00026565	478.8061406240579	40.099	1.5963	40.688	39.312	40.908	0.58915	0.14713	0.00089231	NaN	34.173	89	37	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1970000	+		54059	23906	36046	36061							0.11580985768227947
SILVSVGKNIN	11	Unmodified	_SILVSVGKNIN_					0	0	0			REV__ENSG00000205327|ENST00000548615|OR6C68	REV__ENSG00000205327|ENST00000548615|OR6C68	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	572.3388671875	2	572.340238	1142.66592	0.87335	0.00049985	-0.31004	-0.00017745	0.56331	0.00032241	572.3395530255622	101.42	0.82366	101.56	101.29	102.11	0.14352					44	19	3	0	0	0	0.72739	1	10670	10670		27.047	5.0874	1	286080	+		54060	23550	36047	36062	61278	61278					0.10029659085921594
SINNLEPPV	9	Unmodified	_SINNLEPPV_					0	0	0			REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7638854980469	2	491.763832	981.513111	0.46029	0.00022635	-0.83305	-0.00040966	-0.37277	-0.00018331	491.7633943538634	63.689	0.55103	63.812	63.556	64.107	0.12252					40	22	2	0	0	0	0.71772	1	5590	5590		39.253	0.23134	1	116970	+		54061	19568	36048	36063	61279	61279					0.02161463689287757
SIPAKKKRTGR	11	Unmodified	_SIPAKKKRTGR_					0	0	0		ENST00000525941.1_1_11:784028-784256:+|nuORF	ENST00000525941.1_1_11:784028-784256:+|nuORF	ENST00000525941.1_1_11:784028-784256:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3939208984375	2	621.39367	1240.77279	-1.2196	-0.00075786	-0.45293	-0.00028145	-1.6726	-0.0010393	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.76322	1	11154	11154		19.104	0	1	23459000			54062	13246	36049	36064	61280	61280					0.16203254090919472
SIPLAIFALL	10	Unmodified	_SIPLAIFALL_					0	0	0		ENSG00000182327|ENST00000331264|GLTPD2	ENSG00000182327|ENST00000331264|GLTPD2	ENSG00000182327|ENST00000331264|GLTPD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.2725830078125	2	529.336436	1056.65832	0.32828	0.00017377	-4.1613	-0.0022027	-3.833	-0.0020289	529.334116131967	74.947	0.54063	75.338	75.114	75.654	0.3911					21	12	2	0	0	0	0.37624	1	8459	8459		63.306	4.5243	1	287200			54063	7449	36050	36065	61281	61281					0.13225551556274695
SIPLIGKP	8	Unmodified	_SIPLIGKP_					0	0	0			REV__ENST00000497655.1_1_1:202932056-202932895:-|nuORF	REV__ENST00000497655.1_1_1:202932056-202932895:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.76666259765625	2	412.765646	823.516739	-1.3459	-0.00055553	3.4065	0.0014061	2.0606	0.00085056	412.76701040612045	40.372	1.7448	40.328	39.579	41.324	-0.043694					94	45	3	0	0	0	0.87479	1	3018	3018		30.504	3.7075	1	625910	+		54064	27774	36051	36066	61282	61282					0.09792178253815109
SIPLLKGP	8	Unmodified	_SIPLLKGP_					0	0	0			REV__ENSG00000110427|ENST00000658780|KIAA1549L	REV__ENSG00000110427|ENST00000658780|KIAA1549L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2693786621094	2	412.765646	823.516739	-0.52852	-0.00021815	2.9286	0.0012088	2.4001	0.00099068	412.76723094642836	48.755	3.2946	48.662	47.534	50.828	-0.093178					192	86	3	0	0	0	0.8347	1	3688	3688		23.042	1.3402	1	594400	+		54065	17812	36052	36067	61283	61283					0.09792178253815109
SIPLLRPS	8	Unmodified	_SIPLLRPS_					0	0	0			REV__ENST00000218176.3_1_X:48826803-48826863:-|nuORF	REV__ENST00000218176.3_1_X:48826803-48826863:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78790283203125	2	441.774003	881.533452	0.20955	9.2573E-05	1.7991	0.0007948	2.0087	0.00088737	441.77593834284363	41.585	0.48193	41.658	41.474	41.956	0.073418					14	11	2	0	0	0	0.4196	1	2743	2743		15.642	0	1	85093	+		54066	24142	36053	36068	61284	61284					0.08794679139759864
SIPNQQRRRQ	10	Unmodified	_SIPNQQRRRQ_					0	0	0			REV__ENST00000586914.5_1_19:44669817-44674197:+|nuORF	REV__ENST00000586914.5_1_19:44669817-44674197:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3624267578125	2	641.857983	1281.70141	1.7061	0.001095	0.85773	0.00055054	2.5638	0.0016456	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.74274	1	12382	12382		42.396	1.618	1	27133000	+		54067	29117	36054	36069	61285	61285					0.071831343862641
SIPNQQRRRQ	10	Unmodified	_SIPNQQRRRQ_					0	0	0			REV__ENST00000586914.5_1_19:44669817-44674197:+|nuORF	REV__ENST00000586914.5_1_19:44669817-44674197:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.859619140625	2	641.857983	1281.70141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.28	1	118.37	117.87	118.87	0.087753								0	0	0	0.45132	1	12484	12484		42.396	1.618	1		+		54068	29117	36054	36069	61286	61286					0.071831343862641
SIPPKTSRTL	10	Unmodified	_SIPPKTSRTL_					0	0	0		ENSG00000154175|ENST00000471714|ABI3BP;nc|ENSG00000154175|Q7Z7G0|ABI3BP	ENSG00000154175|ENST00000471714|ABI3BP	ENSG00000154175|ENST00000471714|ABI3BP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	550.3273315429688	2	550.327131	1098.63971	-0.4914	-0.00027043	0.44675	0.00024586	-0.044654	-2.4574E-05	550.3274966608972	100.46	1.192	100.46	99.887	101.08	0					71	27	3	0	0	0	0.86471	1	10186	10186		30.318	5.1917	1	339490			54069	5260	36055	36070	61287	61287					0.09433389914443069
SIPQLELLL	9	Unmodified	_SIPQLELLL_					0	0	0			REV__nc|ENSG00000162746|Q6BAA4-3|FCRLB	REV__nc|ENSG00000162746|Q6BAA4-3|FCRLB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3173828125	2	513.3157	1024.61685	-1.4711	-0.00075512	3.5902	0.0018429	2.1191	0.0010878	513.3174116406972	46.45	1.1988	46.45	46.135	47.334	0					64	33	3	0	0	0	0.78536	1	3508	3508		29.15	0	1	153170	+		54070	29975	36056	36071	61288	61288					0.10552370796949617
SIPVTQELICK	11	Unmodified	_SIPVTQELICK_					0	0	0		nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	410.8982238769531	3	410.89693	1229.66896	0.19613	8.0589E-05	3.1868	0.0013095	3.3829	0.00139	410.89821016706975	17.791	0.31587	17.169	16.993	17.308	-0.62141					18	8	3	0	0	0	0.51578	1	309	309		50.791	13.283	1	229750			54071	5087	36057	36072	61289	61289					0.0633116614840219
SIPVTQELICK	11	Unmodified	_SIPVTQELICK_					0	0	0		nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	410.89693	1229.66896	1.4158	0.00058174	1.7731	0.00072858	3.1889	0.0013103	410.89759815480664	17.656	0.29084	17.173	17.035	17.326	-0.48256	0.0018964	-0.00091024	NaN	50.791	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	263540			54072	5087	36057	36072							0.0633116614840219
SIPVVGPISCS	11	Unmodified	_SIPVVGPISCS_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2825927734375	2	529.781167	1057.54778	-0.14596	-7.7327E-05	-0.38131	-0.00020201	-0.52727	-0.00027934	529.7808734697162	52.59	0.96952	52.63	52.156	53.126	0.040596					58	29	3	0	0	0	0.7342	1	4245	4245		25.574	0	1	360160			54073	6613	36058	36073	61290	61290					0.021309635057150444
SIQQRKAI	8	Unmodified	_SIQQRKAI_					0	0	0		ENSG00000171659|ENST00000378142|GPR34	ENSG00000171659|ENST00000378142|GPR34	ENSG00000171659|ENST00000378142|GPR34	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2877502441406	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.62	1	112.65	112.15	113.15	0.030602								0	0	0	0.29755	1	13622	13622		24.203	0	1				54074	6694	36059	36074	61291	61291					0.08748582399982752
SIQSRLKAQG	10	Unmodified	_SIQSRLKAQG_					0	0	0		nc|ENSG00000170500|Q1L5Z9-2|LONRF2;ENSG00000170500|ENST00000393437|LONRF2	nc|ENSG00000170500|Q1L5Z9-2|LONRF2	nc|ENSG00000170500|Q1L5Z9-2|LONRF2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.3134155273438	2	544.314554	1086.61456	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.141	1	17.062	16.562	17.562	-0.079056								0	0	0	0.45132	1	190	190		29.17	1.0886	1				54075	6596	36060	36075	61292	61292					0.07471335111836197
SIQVESGPWLA	11	Unmodified	_SIQVESGPWLA_					0	0	0		ENSG00000100053|ENST00000215855|CRYBB3	ENSG00000100053|ENST00000215855|CRYBB3	ENSG00000100053|ENST00000215855|CRYBB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	593.8143310546875	2	593.808771	1185.60299	5.6385	0.0033482	2.6124	0.0015512	8.2509	0.0048995	593.8102106425846	110.7	0.31485	110.75	110.63	110.94	0.049095					22	14	2	0	0	0	0.67778	1	13440	13440		35.152	5.982	1	114390			54076	1791	36061	36076	61293	61293					0.017610932978641358
SIQVESGPWLA	11	Unmodified	_SIQVESGPWLA_					0	0	0		ENSG00000100053|ENST00000215855|CRYBB3	ENSG00000100053|ENST00000215855|CRYBB3	ENSG00000100053|ENST00000215855|CRYBB3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	593.808771	1185.60299	0.88948	0.00052818	6.4145	0.003809	7.3039	0.0043371	593.8126815597295	110.96	0.5265	111.08	110.93	111.45	0.11659	0.089622	0.0016049	NaN	35.152	35	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80217			54077	1791	36061	36076							0.017610932978641358
SIQVESGPWLA	11	Unmodified	_SIQVESGPWLA_					0	0	0		ENSG00000100053|ENST00000215855|CRYBB3	ENSG00000100053|ENST00000215855|CRYBB3	ENSG00000100053|ENST00000215855|CRYBB3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	593.808771	1185.60299	0.89411	0.00053093	6.9239	0.0041115	7.818	0.0046424	593.812786868355	111.12	0.5387	111.19	111.02	111.56	0.069542	0.20168	0.0022099	NaN	35.152	23	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45452			54078	1791	36061	36076							0.017610932978641358
SIQVESGPWLA	11	Unmodified	_SIQVESGPWLA_					0	0	0		ENSG00000100053|ENST00000215855|CRYBB3	ENSG00000100053|ENST00000215855|CRYBB3	ENSG00000100053|ENST00000215855|CRYBB3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	593.808771	1185.60299	-1.3097	-0.00077768	9.1082	0.0054085	7.7986	0.0046308	593.8140639050603	111.13	0.37099	111.13	110.94	111.31	-0.0074387	0.1346	0.004804	NaN	35.152	19	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29903			54079	1791	36061	36076							0.017610932978641358
SIRGIVIDGRE	11	Unmodified	_SIRGIVIDGRE_					0	0	0			REV__nc|ENSG00000163728|Q96N46-3|TTC14	REV__nc|ENSG00000163728|Q96N46-3|TTC14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5634765625	3	405.566571	1213.67788	-0.18878	-7.6562E-05	-4.1815	-0.0016959	-4.3703	-0.0017724	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.70847	1	5876	5876		30.139	12.972	1	257140	+		54080	20963	36062	36077	61294	61294					0.0795927582908007
SIRKDILAHVQ	11	Unmodified	_SIRKDILAHVQ_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.585693359375	3	427.254216	1278.74082	0.44087	0.00018836	-3.1026	-0.0013256	-2.6617	-0.0011372	427.252587687813	17.914	0.42382	17.292	17.023	17.447	-0.62141					12	10	2	0	0	0	0.17502	1	318	318		20.315	0	1	49692			54081	7276	36063	36078	61295	61295					0.11259841617106758
SIRKHVALH	9	Unmodified	_SIRKHVALH_					0	0	0		ENST00000481123.1_1_7:139025293-139030447:+|nuORF;ENSG00000164898|ENST00000297534|FMC1;nc|ENSG00000164898|Q96HJ9-2|FMC1	ENST00000481123.1_1_7:139025293-139030447:+|nuORF	ENST00000481123.1_1_7:139025293-139030447:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.8209228515625	2	530.82235	1059.63015	0.78061	0.00041437	-3.4184	-0.0018145	-2.6378	-0.0014002	530.820404965767	82.475	1.248	82.534	82.031	83.279	0.059166					76	28	4	0	0	0	0.78536	1	8251	8251		29.15	3.0862	1	1356800			54082	6020	36064	36079	61296	61296					0.10271666419566827
SIRKKKSAS	9	Unmodified	_SIRKKKSAS_					0	0	0			REV__ENST00000488636.5_1_2:201399822-201407388:+|nuORF	REV__ENST00000488636.5_1_2:201399822-201407388:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	502.81365966796875	2	502.81419	1003.61383	-0.072215	-3.6311E-05	-1.0272	-0.00051647	-1.0994	-0.00055278	502.8137358537146	97.184	3.7296	97.233	96.655	100.38	0.048157					256	86	5	0	0	0	0.76764	1	10354	10354		34.173	7.4796	1	22931000	+		54083	20930	36065	36080	61297	61297					0.11216540462794455
SIRLATKQ	8	Unmodified	_SIRLATKQ_					0	0	0			REV__ENSG00000140396|ENST00000452400|NCOA2	REV__ENSG00000140396|ENST00000452400|NCOA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.7817687988281	2	458.782359	915.550165	-0.3365	-0.00015438	0.68553	0.00031451	0.34903	0.00016013	458.7825063546578	21.176	0.73717	21.112	20.86	21.597	-0.064743					60	28	3	0	0	0	0.90983	1	612	612		42.396	0	1	345540	+		54084	19612	36066	36081	61298	61298					0.08901180025702615
SIRQAFIRKVF	11	Unmodified	_SIRQAFIRKVF_					0	0	0		ENSG00000178719|ENST00000395068|GRINA	ENSG00000178719|ENST00000395068|GRINA	ENSG00000178719|ENST00000395068|GRINA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.608642578125	3	455.610223	1363.80884	-1.1702	-0.00053316	-2.8844	-0.0013142	-4.0546	-0.0018473	455.6088473881977	71.256	2.1835	71.333	70.628	72.811	0.076225					206	91	3	0	0	0	0.76892	1	6408	6408		17.833	0	1	589510			54085	7221	36067	36082	61299	61299					0.14148711267762337
SIRRVYTRL	9	Unmodified	_SIRRVYTRL_					0	0	0		ENST00000429033.1_1_21:32434669-32435362:-|nuORF	ENST00000429033.1_1_21:32434669-32435362:-|nuORF	ENST00000429033.1_1_21:32434669-32435362:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3536376953125	2	582.354014	1162.69348	0.16989	9.8934E-05	-0.87197	-0.0005078	-0.70208	-0.00040886	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.7932	1	12464	12464		18.262	2.6203	1	635410			54086	11599	36068	36083	61300	61300					0.1186360713677459
SISGLIALC	9	Unmodified	_SISGLIALC_					0	0	0		ENSG00000206432|ENST00000383490|TMEM200C;chr18:5895480-5895855|31|12.87|0.24|5.73|-|ENST00000581347|TMEM200C,TMEM200C	ENSG00000206432|ENST00000383490|TMEM200C	ENSG00000206432|ENST00000383490|TMEM200C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7676696777344	2	438.746596	875.478639	-1.514	-0.00066426	0.27361	0.00012004	-1.2404	-0.00054422	438.7443946804842	42.173	0.12044	42.871	42.81	42.931	0.69754					4	2	2	0	0	0	0.20789	1	3759	3759		11.511	1.2458	1	48801			54087	255	36069	36084	61301	61301					0.035919242768159165
SISGVLTY	8	Unmodified	_SISGVLTY_					0	0	0			REV__ENST00000431534.5_1_22:41925289-41928713:-|nuORF	REV__ENST00000431534.5_1_22:41925289-41928713:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2275390625	2	420.229094	838.443634	-1.7925	-0.00075327	-1.0357	-0.00043521	-2.8282	-0.0011885	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.87922	1	7436	7436		31.955	3.7006	1	831720	+		54088	17191	36070	36085	61302	61302					0.01795004740506556
SISKNGRLN	9	Unmodified	_SISKNGRLN_					0	0	0			REV__ENSG00000170477|ENST00000551956|KRT4	REV__ENSG00000170477|ENST00000551956|KRT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7802429199219	2	494.780348	987.546142	-0.85772	-0.00042438	0.93735	0.00046378	0.07963	3.9399E-05	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.73802	1	8899	8899		37.812	5.8567	1	737700	+	+	54089	15986	36071	36086	61303	61303					0.05187090532001548
SISKTISY	8	Unmodified	_SISKTISY_					0	0	0			REV__ENST00000524753.4_1_11:18369576-18369654:+|nuORF	REV__ENST00000524753.4_1_11:18369576-18369654:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.7472839355469	2	449.74765	897.480748	0.054337	2.4438E-05	-0.33651	-0.00015134	-0.28217	-0.0001269	449.7475095697994	36.419	0.83972	36.359	35.934	36.774	-0.060333					39	24	2	0	0	0	0.88601	1	2022	2022		34.173	5.023	1	134990	+		54090	28172	36072	36087	61304	61304					0.02790676286292637
SISSRHVLL	9	Unmodified	_SISSRHVLL_					0	0	0		nc|ENSG00000166734|Q6P4E1-3|GOLM2;nc|ENSG00000166734|Q6P4E1-2|GOLM2;nc|ENSG00000166734|Q6P4E1-5|GOLM2;ENSG00000166734|ENST00000299957|GOLM2;ENST00000429162.2_1_15:44581227-44599615:+|nuORF	nc|ENSG00000166734|Q6P4E1-3|GOLM2	nc|ENSG00000166734|Q6P4E1-3|GOLM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.2999572753906	2	506.300916	1010.58728	2.2899	0.0011594	-2.1661	-0.0010967	0.12389	6.2724E-05	506.2997439327226	96.465	1.166	96.408	95.894	97.06	-0.056389					72	26	3	0	0	0	0.7932	1	10364	10364		19.997	0.6368	1	446160			54091	6224	36073	36088	61305	61305					0.08240851571486019
SISSSHCS	8	Unmodified	_SISSSHCS_					0	0	0		ENST00000368069.7_1_1:160305060-160310036:-|nuORF	ENST00000368069.7_1_1:160305060-160310036:-|nuORF	ENST00000368069.7_1_1:160305060-160310036:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5747985839844	2	404.16871	806.322867	-0.17807	-7.1972E-05	3.8939	0.0015738	3.7159	0.0015018	404.1702188761834	80.115	1.1432	80.642	79.976	81.12	0.52676					39	26	2	0	0	0	0.4196	1	9181	9181		31.955	0	1	134160			54092	10581	36074	36089	61306	61306					-0.08804146244585809
SISSSITSS	9	Unmodified	_SISSSITSS_					0	0	0		ENSG00000132478|ENST00000589666|UNK	ENSG00000132478|ENST00000589666|UNK	ENSG00000132478|ENST00000589666|UNK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77996826171875	2	434.716547	867.418542	-0.16865	-7.3313E-05	1.5654	0.00068051	1.3968	0.0006072	434.7166962307699	59.616	0.811	59.602	59.225	60.036	-0.013729					30	21	2	0	0	0	0.20789	1	5517	5517		29.15	6.1071	1	96133			54093	3800	36075	36090	61307	61307					-0.020470948526963184
SITCAGAILI	10	Carbamidomethyl (C)	_SITC(Carbamidomethyl (C))AGAILI_	SITC(1)AGAILI		SITC(53)AGAILI		0	1	0		ENSG00000180773|ENST00000326402|SLC36A4;ENST00000527503.1_1_11:92881705-92887463:-|nuORF;nc|ENSG00000180773|Q6YBV0-2|SLC36A4	ENSG00000180773|ENST00000326402|SLC36A4	ENSG00000180773|ENST00000326402|SLC36A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.783447265625	2	509.78371	1017.55287	2.0655	0.0010529	1.3364	0.00068125	3.4018	0.0017342	509.7839834358301	106.91	0.92004	107.01	106.61	107.53	0.10396					57	33	3	0	0	0	0.53935	1	13010	13010		53.351	7.3995	1	400230			54094	7346	36076	36091	61308	61308	92				0.04479267368355977
SITIAKHVEAS	11	Unmodified	_SITIAKHVEAS_					0	0	0			REV__nc|ENSG00000142687|Q8IZA0-2|KIAA0319L	REV__nc|ENSG00000142687|Q8IZA0-2|KIAA0319L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.320556640625	2	578.322045	1154.62954	-1.36	-0.00078649	-1.1758	-0.00067998	-2.5357	-0.0014665	578.3215937705486	92.438	2.8262	92.624	91.324	94.15	0.18582					174	66	3	0	0	0	0.72106	1	9235	9235		28.081	1.0342	1	562630	+		54095	19752	36077	36092	61309	61309					0.058407821891933054
SITIARVEYL	10	Unmodified	_SITIARVEYL_					0	0	0			REV__ENST00000590607.1_1_19:29704218-29706237:+|nuORF	REV__ENST00000590607.1_1_19:29704218-29706237:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.8314208984375	2	582.834788	1163.65502	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.208	1	94.64	94.14	95.14	0.4324								0	0	0	0.45132	1	11240	11240		32.812	6.749	1		+		54096	29188	36078	36093	61310	61310					0.07974256711622729
SITIVRRE	8	Unmodified	_SITIVRRE_					0	0	0			REV__ENST00000468927.1_1_2:111423713-111425408:-|nuORF	REV__ENST00000468927.1_1_2:111423713-111425408:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.2928771972656	2	487.293091	972.571629	-0.95023	-0.00046304	1.0703	0.00052155	0.12007	5.8511E-05	487.2934854308046	90.996	2.8908	91.042	90.474	93.365	0.046448					155	69	4	0	0	0	0.88601	1	9500	9500		34.173	5.0025	1	2321800	+		54097	21592	36079	36094	61311	61311					0.08424565054417599
SITKNLLEKKT	11	Unmodified	_SITKNLLEKKT_					0	0	0		ENST00000397799.1_3_1:36562928-36563456:-|nuORF	ENST00000397799.1_3_1:36562928-36563456:-|nuORF	ENST00000397799.1_3_1:36562928-36563456:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	637.3857421875	2	637.887552	1273.76055	1.5419	0.00098357	-2.2914	-0.0014617	-0.74951	-0.0004781	637.8858875068771	111.65	0.6479	111.77	111.45	112.09	0.11118					41	19	3	0	0	0	0.18021	1	12021	12021		18.262	2.6203	1	25703000			54098	11161	36080	36095	61312	61312					0.13462172837216713
SITKNLLEKKT	11	Unmodified	_SITKNLLEKKT_					0	0	0		ENST00000397799.1_3_1:36562928-36563456:-|nuORF	ENST00000397799.1_3_1:36562928-36563456:-|nuORF	ENST00000397799.1_3_1:36562928-36563456:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	637.887552	1273.76055	0.93718	0.00059782	-1.5188	-0.00096884	-0.58164	-0.00037102	638.3881010194847	111.89	0.61391	111.96	111.5	112.12	0.069542	0.095599	0.00039269	NaN	18.262	48	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7938900			54099	11161	36080	36095							0.13462172837216713
SITLIPKP	8	Unmodified	_SITLIPKP_					0	0	0		L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|10|1|sense;L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|39|1|sense	L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|10|1|sense	L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|10|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7793884277344	2	434.778754	867.542954	-1.1228	-0.00048815	3.4102	0.0014827	2.2874	0.00099453	434.7801032015678	43.351	2.0206	43.315	42.595	44.616	-0.035816					155	47	4	0	0	0	0.87479	1	3459	3459		30.504	0.6621	1	2016300			54100	14511	36081	36096	61313	61313					0.10388447425282266
SITLIPKP	8	Unmodified	_SITLIPKP_					0	0	0		L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|10|1|sense;L1PB1_dup732|chr1:227528334-227533261:-|2.286845973914474|0.4841042275833316|2.24|63.0|39|1|sense	L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|10|1|sense	L1M1_dup621|chr1:224985612-224987088:+|1.8546551004615852|0.0275683224481481|6.07|63.0|10|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7799377441406	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.89962	1	3277	3277		38.806	1.7777	1	17256000			54101	14511	36081	36096	61314	61314					0.10388447425282266
SITLTYFHLL	10	Unmodified	_SITLTYFHLL_					0	0	0			REV__L1M3_dup5191|chr13:100538615-100539826:-|1.143422986957237|0.4271131615856792|1.42|63.0|31|3|sense	REV__L1M3_dup5191|chr13:100538615-100539826:-|1.143422986957237|0.4271131615856792|1.42|63.0|31|3|sense	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.366455078125	2	604.339707	1206.66486	-0.16858	-0.00010188	1.6951	0.0010244	1.5265	0.00092252	604.3403751575827	104.87	0.5801	104.87	104.62	105.2	0					28	13	3	0	0	0	0.37624	1	10819	10819		35.618	13.933	1	239670	+		54102	29457	36082	36097	61315	61315					0.06979444716989747
SITQIGVSSMA	11	Unmodified	_SITQIGVSSMA_					0	0	0			REV__ENSG00000164061|ENST00000296452|BSN	REV__ENSG00000164061|ENST00000296452|BSN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	547.2849731445312	2	547.281531	1092.54851	0.1543	8.4446E-05	-3.2311	-0.0017683	-3.0768	-0.0016839	547.2795816099393	26.806	0.80088	26.847	26.577	27.378	0.040834					51	26	3	0	0	0	0.62614	1	1198	1198		41.427	3.6151	1	154920	+		54103	21019	36083	36098	61316	61316					0.005937581547868831
SITRKRKRED	10	Unmodified	_SITRKRKRED_					0	0	0		nc|ENSG00000107937|Q9BZE4-3|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;ENSG00000107937|ENST00000360803|GTPBP4	nc|ENSG00000107937|Q9BZE4-3|GTPBP4	nc|ENSG00000107937|Q9BZE4-3|GTPBP4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	644.8828735351562	2	644.875842	1287.73713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.399	1	66.444	65.944	66.944	0.045113								0	0	0	0.45132	1	5882	5882		37.812	3.8899	1				54104	2380	36084	36099	61317	61317					0.10477171843263022
SITSVFITK	9	Unmodified	_SITSVFITK_					0	0	0		nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2914123535156	2	498.292225	994.569897	-0.35366	-0.00017623	0.32509	0.00016199	-0.028574	-1.4238E-05	498.29222427278074	55.709	0.82693	56.11	55.571	56.398	0.40101					37	19	3	0	0	0	0.14236	1	5719	5719		85.161	16.374	1	900850			54105	8045	36085	36100	61318	61318					0.07239511245802532
SITSVFITK	9	Unmodified	_SITSVFITK_					0	0	0		nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.2908630371094	2	498.292225	994.569897	0.23892	0.00011905	-0.30065	-0.00014981	-0.06173	-3.076E-05	498.29195783757626	55.527	0.57973	56.095	55.783	56.363	0.56836					31	13	3	0	0	0	0.10914	3	5710	5710;5720;5733		90.601	23.107	1	1052500			54106	8045	36085	36100	61319;61320;61321	61319					0.07239511245802532
SIVELKLQ	8	Unmodified	_SIVELKLQ_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.2823181152344	2	465.286943	928.559333	0.55544	0.00025844	-0.35227	-0.00016391	0.20317	9.4533E-05	465.28665991732896	77.113	1.0041	77.248	76.927	77.932	0.13478					108	48	3	0	0	0	0.91982	1	7280	7280		45.972	0	1	1591900			54107	7880	36086	36101	61322	61322					0.09219528591370363
SIVGLKYS	8	Unmodified	_SIVGLKYS_					0	0	0		chr2:189088772-189089872|16|51.81|0.05|9.92|-|1|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|18	chr2:189088772-189089872|16|51.81|0.05|9.92|-|1|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|18	chr2:189088772-189089872|16|51.81|0.05|9.92|-|1|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.7528991699219	2	433.752736	865.490919	0.16558	7.1822E-05	0.12045	5.2244E-05	0.28603	0.00012407	433.75263120517457	61.559	3.4925	62.113	61.36	64.852	0.55386					226	86	4	0	0	0	0.42407	1	6656	6656		79.451	13.648	1	1110200			54108	321	36087	36102	61323	61323					0.05279284011521668
SIVKLWEPQ	9	Unmodified	_SIVKLWEPQ_					0	0	0			REV__ENSG00000184144|ENST00000331830|CNTN2	REV__ENSG00000184144|ENST00000331830|CNTN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3084716796875	2	550.310949	1098.60735	-1.3837	-0.00076145	-2.1905	-0.0012054	-3.5741	-0.0019669	550.3096185599048	31.41	0.90482	31.49	31.121	32.026	0.079834					52	20	4	0	0	0	0.33718	1	2133	2133		62.107	0.41614	1	1494500	+		54109	22646	36088	36103	61324	61324					0.06198602511403806
SIVKQYLDFKL	11	Unmodified	_SIVKQYLDFKL_					0	0	0		nc|ENSG00000164190|Q6KC79-2|NIPBL;ENSG00000164190|ENST00000282516|NIPBL;ENST00000514335.1_1_5:37051847-37064632:+|nuORF	nc|ENSG00000164190|Q6KC79-2|NIPBL	nc|ENSG00000164190|Q6KC79-2|NIPBL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.9325866699219	3	451.930739	1352.77039	0.82689	0.0003737	3.4639	0.0015654	4.2908	0.0019391	451.9322387117762	100.27	1.763	100.6	99.729	101.49	0.33295					121	44	4	0	0	0	0.73277	1	12157	12157		25.892	9.3619	1	816050			54110	5936	36089	36104	61325	61325					0.10811360842581053
SIVSILTT	8	Unmodified	_SIVSILTT_					0	0	0		ENSG00000198678|ENST00000328207|OR5BS1P	ENSG00000198678|ENST00000328207|OR5BS1P	ENSG00000198678|ENST00000328207|OR5BS1P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2512512207031	2	417.252569	832.490584	-0.20849	-8.6991E-05	0.47489	0.00019815	0.2664	0.00011116	417.2527156855551	40.298	1.271	40.25	40.046	41.317	-0.04789					89	47	3	0	0	0	0.7961	1	2596	2596		17.365	2.7009	1	609210			54111	8304	36090	36105	61326	61326					0.06763864291656319
SIVVPVAAAVH	11	Unmodified	_SIVVPVAAAVH_					0	0	0			REV__ENST00000371602.8_1_20:49507708-49507915:-|nuORF	REV__ENST00000371602.8_1_20:49507708-49507915:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8167724609375	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.67493	1	8388	8388		35.618	5.1146	1	1422300	+		54112	25692	36091	36106	61327	61327					0.09498308748334239
SIVVQVQCINK	11	Unmodified	_SIVVQVQCINK_					0	0	0		nc|ENSG00000150275|Q96QU1-6|PCDH15;ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000150275|Q96QU1-3|PCDH15;nc|ENSG00000150275|Q96QU1-4|PCDH15;nc|ENSG00000150275|Q96QU1|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	nc|ENSG00000150275|Q96QU1-6|PCDH15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	410.9004821777344	3	410.900674	1229.68019	2.85	0.0011711	-4.3705	-0.0017958	-1.5205	-0.00062477	410.89886817490543	22.825	0.68475	22.775	22.569	23.254	-0.050077					37	23	2	0	0	0	0.72892	1	724	724		26.75	1.6237	1	42510			54113	5061	36092	36107	61328	61328					0.0745398824253698
SIWRGEYG	8	Unmodified	_SIWRGEYG_					0	0	0			REV__ENST00000545398.5_1_X:100297267-100306867:-|nuORF	REV__ENST00000545398.5_1_X:100297267-100306867:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.2378845214844	2	484.235242	966.45593	-0.75871	-0.00036739	2.9322	0.0014199	2.1734	0.0010525	484.2367477050762	85.41	1.1411	85.595	85.231	86.372	0.18523					85	26	5	0	0	0	0.9295	1	8362	8362		55.504	0	1	7171700	+		54114	28524	36093	36108	61329	61329					-0.028639587964335078
SIWRTLLLIP	10	Unmodified	_SIWRTLLLIP_					0	0	0		ENST00000517873.2_1_8:47884723-47885119:-|nuORF	ENST00000517873.2_1_8:47884723-47885119:-|nuORF	ENST00000517873.2_1_8:47884723-47885119:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.5875244140625	3	404.588536	1210.74378	-1.8671	-0.00075542	2.7228	0.0011016	0.85564	0.00034618	404.58952264006433	41.149	1.3462	41.149	40.379	41.725	0					65	43	2	0	0	0	0.8573	1	2675	2675		16.007	1.9208	1	159110			54115	13108	36094	36109	61330	61330					0.14683716741956232
SIYLKTFLQ	9	Unmodified	_SIYLKTFLQ_					0	0	0		nc|ENSG00000256407|Q6IPT4-3|CYB5RL;ENST00000490863.5_1_1:54640294-54649992:-|nuORF;ENST00000528287.5_1_1:54640294-54656520:-|nuORF;ENSG00000215883|ENST00000534324|CYB5RL	nc|ENSG00000256407|Q6IPT4-3|CYB5RL	nc|ENSG00000256407|Q6IPT4-3|CYB5RL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.8208618164062	2	556.82115	1111.62775	-0.047002	-2.6172E-05	0.92896	0.00051726	0.88195	0.00049109	556.8216928932994	70.17	0.27465	70.554	70.393	70.668	0.38416					10	6	2	0	0	0	0.38563	1	7773	7773		58.782	2.0609	1	105920			54116	8655	36095	36110	61331	61331					0.07639773171217712
SIYLKTFLQ	9	Unmodified	_SIYLKTFLQ_					0	0	0		nc|ENSG00000256407|Q6IPT4-3|CYB5RL;ENST00000490863.5_1_1:54640294-54649992:-|nuORF;ENST00000528287.5_1_1:54640294-54656520:-|nuORF;ENSG00000215883|ENST00000534324|CYB5RL	nc|ENSG00000256407|Q6IPT4-3|CYB5RL	nc|ENSG00000256407|Q6IPT4-3|CYB5RL	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	556.82115	1111.62775	-0.28873	-0.00016077	2.2552	0.0012557	1.9665	0.001095	556.8225217537729	70.093	0.34252	70.64	70.419	70.762	0.54693	0.042991	0.00080744	NaN	58.782	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65748			54117	8655	36095	36110							0.07639773171217712
SIYMIPVGPI	10	Unmodified	_SIYMIPVGPI_					0	0	0			REV__ENSG00000119616|ENST00000341162|FCF1	REV__ENSG00000119616|ENST00000341162|FCF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.811767578125	2	545.304278	1088.594	0.47964	0.00026155	2.8734	0.0015669	3.3531	0.0018284	545.3056882107827	60.04	0.52508	60.157	59.906	60.431	0.11676					25	16	2	0	0	0	0.86305	1	5202	5202		31.955	4.9075	1	109660	+		54118	18362	36096	36111	61332	61332					0.05325028407833088
SIYPSSAHS	9	Unmodified	_SIYPSSAHS_					0	0	0			REV__nc|ENSG00000144355|P56177-2|DLX1	REV__nc|ENSG00000144355|P56177-2|DLX1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	474.2322998046875	2	474.724707	947.43486	0.19038	9.0378E-05	-0.29207	-0.00013865	-0.10169	-4.8277E-05	474.72435716451605	39.947	0.85958	39.917	39.48	40.34	-0.03027					41	20	3	0	0	0	0.20789	1	2830	2830		42.396	0	1	324480	+		54119	19883	36097	36112	61333	61333					-0.040959688959446794
SIYPSSAHS	9	Unmodified	_SIYPSSAHS_					0	0	0			REV__nc|ENSG00000144355|P56177-2|DLX1	REV__nc|ENSG00000144355|P56177-2|DLX1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	474.724707	947.43486	-0.98468	-0.00046745	0.69715	0.00033095	-0.28753	-0.0001365	474.7250760705147	39.874	0.55777	39.881	39.598	40.156	0.0065002	0.067444	-0.00033487	NaN	42.396	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121790	+		54120	19883	36097	36112							-0.040959688959446794
SKAELGALPDD	11	Unmodified	_SKAELGALPDD_					0	0	0		ENST00000506677.1_1_5:65076017-65081739:+|nuORF;ENST00000506539.5_1_5:65018131-65088776:+|nuORF;ENSG00000123213|ENST00000380985|NLN	ENST00000506677.1_1_5:65076017-65081739:+|nuORF	ENST00000506677.1_1_5:65076017-65081739:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.2903442382812	2	558.282586	1114.55062	0.44639	0.00024921	3.1843	0.0017778	3.6307	0.002027	558.2840615555907	75.271	0.56576	75.318	75.022	75.588	0.04644					35	15	3	0	0	0	0.70737	1	7336	7336		30.318	1.1477	1	94987			54121	3265	36098	36113	61334	61334					-0.0020748983574776503
SKAKGRRG	8	Unmodified	_SKAKGRRG_					0	0	0			REV__ENST00000349736.9_1_20:463717-463870:-|nuORF	REV__ENST00000349736.9_1_20:463717-463870:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7512512207031	2	430.264668	858.514782	1.5553	0.00066919	1.2165	0.00052342	2.7718	0.0011926	430.264930212779	34.964	0.23276	35.346	35.288	35.52	0.3812					6	5	2	0	0	0	0.4196	1	2659	2659		31.53	0	1	44330	+		54122	25334	36099	36114	61335	61335					0.07986562288556343
SKAKSKCGP	9	Unmodified	_SKAKSKCGP_					0	0	0		ENST00000532490.1_1_11:36022639-36250762:+|nuORF	ENST00000532490.1_1_11:36022639-36250762:+|nuORF	ENST00000532490.1_1_11:36022639-36250762:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.7685241699219	2	453.247295	904.480036	0.17564	7.9609E-05	-4.3701	-0.0019807	-4.1945	-0.0019011	453.2451936206733	30.349	0.95473	30.289	29.821	30.776	-0.059814					26	21	2	0	0	0	0.20789	1	1958	1958		40.778	18.818	1	54038			54123	13379	36100	36115	61336	61336					0.023975583655897026
SKALSEIK	8	Unmodified	_SKALSEIK_					0	0	0			REV__nc|ENSG00000132305|Q16891-2|IMMT	REV__nc|ENSG00000132305|Q16891-2|IMMT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2627258300781	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.82452	1	2991	2991		21.686	0	1	21381000	+		54124	18991	36101	36116	61337	61337					0.07010669040221273
SKALVLEI	8	Unmodified	_SKALVLEI_					0	0	0		ENST00000297447.10_1_8:107738354-107738402:+|nuORF	ENST00000297447.10_1_8:107738354-107738402:+|nuORF	ENST00000297447.10_1_8:107738354-107738402:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.77484130859375	2	436.776211	871.537869	-0.16229	-7.0884E-05	-2.9337	-0.0012814	-3.096	-0.0013523	436.7748521794808	90.962	3.1947	91.031	89.732	92.927	0.069328					237	75	5	0	0	0	0.89043	1	9467	9467		35.618	2.1027	1	15341000			54125	9759	36102	36117	61338	61338					0.0969614356264401
SKALVLEI	8	Unmodified	_SKALVLEI_					0	0	0		ENST00000297447.10_1_8:107738354-107738402:+|nuORF	ENST00000297447.10_1_8:107738354-107738402:+|nuORF	ENST00000297447.10_1_8:107738354-107738402:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.7750244140625	2	436.776211	871.537869	-0.99178	-0.00043318	-2.1014	-0.00091785	-3.0932	-0.001351	436.7752083239027	90.559	2.3196	91.029	90.562	92.882	0.47068					153	55	5	0	0	0	0.87064	1	10829	10829		29.15	3.6994	1	11924000			54126	9759	36102	36117	61339	61339					0.0969614356264401
SKANAVAR	8	Unmodified	_SKANAVAR_					0	0	0			REV__nc|ENSG00000105499|Q9UP65-2|PLA2G4C	REV__nc|ENSG00000105499|Q9UP65-2|PLA2G4C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7393798828125	2	408.737951	815.46135	-0.071529	-2.9237E-05	4.315	0.0017637	4.2434	0.0017344	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.80959	1	2028	2028		15.642	0	1	1654100	+		54127	17545	36103	36118	61340	61340					0.04623764786038009
SKARPLTASA	10	Unmodified	_SKARPLTASA_					0	0	0			REV__ENSG00000198722|ENST00000635942|UNC13B	REV__ENSG00000198722|ENST00000635942|UNC13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29034423828125	2	501.290548	1000.56654	-0.064942	-3.2555E-05	-0.21369	-0.00010712	-0.27863	-0.00013967	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.66675	1	8374	8374		46.457	12.284	1	2854100	+		54128	23365	36104	36119	61341	61341					0.06628261191792717
SKASPKLRLPI	11	Unmodified	_SKASPKLRLPI_					0	0	0			REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|124|2|sense	REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.332661586113416|0.1454864550760078|3.2|63.0|124|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.92950439453125	3	403.92744	1208.76049	2.3249	0.0009391	3.1739	0.001282	5.4989	0.0022211	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.77511	1	3832	3832		16.53	0	1	2948200	+		54129	29565	36105	36120	61342	61342					0.16446217627890292
SKATASSLLL	10	Unmodified	_SKATASSLLL_					0	0	0		nc|ENSG00000131233|P57773-2|GJA9	nc|ENSG00000131233|P57773-2|GJA9	nc|ENSG00000131233|P57773-2|GJA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.7970275878906	2	495.795132	989.575711	1.3672	0.00067785	2.9617	0.0014684	4.3289	0.0021462	495.79626399989235	105.14	1.0402	105.29	104.99	106.03	0.15583					65	26	4	0	0	0	0.57924	1	12845	12845		51.193	1.1682	1	604160			54130	14914	36106	36121	61343	61343					0.08050609757481197
SKAVVIHK	8	Unmodified	_SKAVVIHK_					0	0	0		nc|ENSG00000130956|Q5JVS0-2|HABP4;ENSG00000130956|ENST00000375249|HABP4	nc|ENSG00000130956|Q5JVS0-2|HABP4	nc|ENSG00000130956|Q5JVS0-2|HABP4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.2811279296875	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.837	1	40.806	40.306	41.306	-0.030991								0	0	0	0.31062	1	2938	2938		12.207	3.3845	1				54131	3701	36107	36122	61344	61344					0.10438385376653514
SKCESVTLN	9	Unmodified	_SKCESVTLN_					0	0	0			REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.7374267578125	2	490.739499	979.464446	-0.21609	-0.00010605	0.15093	7.4067E-05	-0.065165	-3.1979E-05	490.73941262460767	29.876	0.80215	29.833	29.476	30.278	-0.043095					41	18	3	0	0	0	0.76255	1	1566	1566		35.618	0	1	224660	+		54132	19880	36108	36123	61345	61345					-0.026107729421028125
SKCESVTLN	9	Unmodified	_SKCESVTLN_					0	0	0			REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	490.739499	979.464446	0.30597	0.00015015	-0.16635	-8.1634E-05	0.13962	6.8517E-05	490.7391965586475	29.797	0.8398	29.822	29.538	30.377	0.025013	-0.11269	-0.00066806	NaN	35.618	41	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	160390	+		54133	19880	36108	36123							-0.026107729421028125
SKCESVTLN	9	Unmodified	_SKCESVTLN_					0	0	0			REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	490.739499	979.464446	-0.21609	-0.00010605	0.15093	7.4067E-05	-0.065165	-3.1979E-05	490.73941262460767	29.876	0.80215	29.833	29.476	30.278	-0.043095	-0.10174	-0.00035666	NaN	35.618	41	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224660	+		54134	19880	36108	36123							-0.026107729421028125
SKCESVTLN	9	Unmodified	_SKCESVTLN_					0	0	0			REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	490.739499	979.464446	-1.4108	-0.00069232	1.3774	0.00067596	-0.033343	-1.6363E-05	490.74000516171805	29.909	0.84337	29.894	29.524	30.367	-0.015167	-0.039957	0.00084712	NaN	35.618	44	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	210260	+		54135	19880	36108	36123							-0.026107729421028125
SKCESVTLN	9	Unmodified	_SKCESVTLN_					0	0	0			REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	490.739499	979.464446	-1.3618	-0.0006683	1.3093	0.00064251	-0.052545	-2.5786E-05	490.73978296384377	30.09	0.31014	30.118	29.964	30.274	0.028618	0.18417	0.00078023	NaN	35.618	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40460	+		54136	19880	36108	36123							-0.026107729421028125
SKCESVTLN	9	Unmodified	_SKCESVTLN_					0	0	0			REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	490.739499	979.464446	0.073392	3.6016E-05	-0.62572	-0.00030707	-0.55233	-0.00027105	490.7389725694689	30.094	0.34981	30.004	29.917	30.267	-0.089546	0.070217	-0.0011189	NaN	35.618	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56440	+		54137	19880	36108	36123							-0.026107729421028125
SKCGVMAS	8	Carbamidomethyl (C),Oxidation (M)	_SKC(Carbamidomethyl (C))GVM(Oxidation (M))AS_	SKC(1)GVMAS	SKCGVM(1)AS	SKC(42)GVMAS	SKCGVM(42)AS	0	1	1		ENST00000490075.5_1_1:17301417-17303350:-|nuORF;nc|ENSG00000117122|P55001-3|MFAP2;nc|ENSG00000117122|P55001-2|MFAP2;ENSG00000117122|ENST00000375535|MFAP2	ENST00000490075.5_1_1:17301417-17303350:-|nuORF	ENST00000490075.5_1_1:17301417-17303350:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.18878173828125	2	428.188588	854.362623	0.56239	0.00024081	-0.26121	-0.00011185	0.30118	0.00012896	428.188480846816	95.18	2.0833	95.6	94.977	97.06	0.41964					117	50	4	0	0	0	0.90983	1	11421	11421		42.396	11.892	1	1648300			54138	2963	36109	36124	61346	61346	34	58			-0.0703834256553364
SKCLKLVVH	9	Unmodified	_SKCLKLVVH_					0	0	0			REV__ENST00000519856.1_1_8:48424103-48424298:-|nuORF	REV__ENST00000519856.1_1_8:48424103-48424298:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8088989257812	2	513.810062	1025.60557	-1.4174	-0.00072826	-0.72923	-0.00037469	-2.1466	-0.0011029	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.7932	1	3965	3965		23.523	3.5259	1	1977600	+		54139	28088	36110	36125	61347	61347					0.09379270221802471
SKCLKLVVH	9	Unmodified	_SKCLKLVVH_					0	0	0			REV__ENST00000519856.1_1_8:48424103-48424298:-|nuORF	REV__ENST00000519856.1_1_8:48424103-48424298:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8087158203125	2	513.810062	1025.60557	-1.3833	-0.00071076	-0.62879	-0.00032308	-2.0121	-0.0010338	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.7932	1	4249	4249		21.96	1.013	1	1148600	+		54140	28088	36110	36125	61348	61348					0.09379270221802471
SKCLKLVVH	9	Unmodified	_SKCLKLVVH_					0	0	0			REV__ENST00000519856.1_1_8:48424103-48424298:-|nuORF	REV__ENST00000519856.1_1_8:48424103-48424298:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8085327148438	2	513.810062	1025.60557	-0.49114	-0.00025236	-1.8445	-0.00094774	-2.3357	-0.0012001	513.8089618478288	47.549	2.118	48.472	47.871	49.989	0.92315					109	52	4	0	0	0	0.7932	1	4539	4539		25.574	7.2496	1	2805200	+		54141	28088	36110	36125	61349	61349					0.09379270221802471
SKDEKIKSIAK	11	Unmodified	_SKDEKIKSIAK_					0	0	0			REV__nc|nan|Q5JVX7-2|C1orf141	REV__nc|nan|Q5JVX7-2|C1orf141	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	623.8715209960938	2	623.871902	1245.72925	-0.25925	-0.00016174	-2.1497	-0.0013411	-2.409	-0.0015029	623.8704556455313	104.73	1.8693	104.71	104.28	106.15	-0.014809					121	44	4	0	0	0	0.74763	1	11341	11341		22.58	2.5829	1	1315900	+		54142	23448	36111	36126	61350	61350					0.11621599803129357
SKDEKIKSIAK	11	Unmodified	_SKDEKIKSIAK_					0	0	0			REV__nc|nan|Q5JVX7-2|C1orf141	REV__nc|nan|Q5JVX7-2|C1orf141	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	623.8706665039062	2	623.871902	1245.72925	0.81494	0.00050842	-3.1765	-0.0019817	-2.3615	-0.0014733	623.869854859963	104.57	2.157	104.61	104.13	106.28	0.039856					135	51	4	0	0	0	0.68532	1	11403	11403		33.922	3.6039	1	1612700	+		54143	23448	36111	36126	61351	61351					0.11621599803129357
SKDEKIKSIAK	11	Unmodified	_SKDEKIKSIAK_					0	0	0			REV__nc|nan|Q5JVX7-2|C1orf141	REV__nc|nan|Q5JVX7-2|C1orf141	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	623.871902	1245.72925	2.0691	0.0012909	-3.899	-0.0024325	-1.8298	-0.0011416	623.8691216038344	104.26	1.0541	104.45	104.01	105.06	0.18888	-0.14254	-0.0010599	NaN	33.922	42	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185520	+		54144	23448	36111	36126							0.11621599803129357
SKDEKIKSIAK	11	Unmodified	_SKDEKIKSIAK_					0	0	0			REV__nc|nan|Q5JVX7-2|C1orf141	REV__nc|nan|Q5JVX7-2|C1orf141	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	623.871902	1245.72925	4.2822	0.0026715	-6.0585	-0.0037797	-1.7763	-0.0011082	623.8677304714248	104.16	0.96236	104.4	104.06	105.03	0.24114	-0.19094	-0.0037545	NaN	33.922	34	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123110	+		54145	23448	36111	36126							0.11621599803129357
SKDFINIGLI	10	Unmodified	_SKDFINIGLI_					0	0	0			REV__ENSG00000171467|ENST00000361428|ZNF318	REV__ENSG00000171467|ENST00000361428|ZNF318	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3400268554688	2	560.324057	1118.63356	0.86134	0.00048263	3.5729	0.002002	4.4343	0.0024846	560.3260657459012	102.07	0.24429	102.2	101.98	102.22	0.13523					6	5	2	0	0	0	0.37624	1	10703	10703		25.574	0	1	1179100	+		54146	21733	36112	36127	61352	61352					0.07898871682891695
SKDKAPKKDS	10	Unmodified	_SKDKAPKKDS_					0	0	0			REV__ENSG00000130382|ENST00000252674|MLLT1	REV__ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.306640625	2	552.306395	1102.59824	-0.5921	-0.00032702	0.79388	0.00043846	0.20178	0.00011145	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.82886	1	9126	9126		37.812	8.6415	1	1102700	+		54147	18872	36113	36128	61353	61353					0.05104209155092576
SKDKPKEAK	9	Unmodified	_SKDKPKEAK_					0	0	0		nc|ENSG00000129003|Q709C8-2|VPS13C;ENSG00000129003|ENST00000644861|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.80029296875	2	515.798206	1029.58186	-0.0063158	-3.2577E-06	0.11037	5.6928E-05	0.10405	5.3671E-05	515.7979776623419	22.5	0.57006	22.441	22.217	22.787	-0.058668					43	21	3	0	0	0	0.71772	1	740	740		39.253	0.44669	1	61606			54148	3570	36114	36129	61354	61354					0.06825127988986424
SKDLLRRTR	9	Unmodified	_SKDLLRRTR_					0	0	0			REV__nc|ENSG00000086991|Q9NPH5-5|NOX4	REV__nc|ENSG00000086991|Q9NPH5-5|NOX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	572.8494873046875	2	572.849096	1143.68364	0.027736	1.5889E-05	0.70034	0.00040119	0.72807	0.00041708	572.8493920289332	16.911	0.34712	16.988	16.858	17.205	0.07715					29	14	3	0	0	0	0.38563	1	150	150		58.782	0	1	138760	+		54149	16917	36115	36130	61355	61355					0.11754419131420946
SKDNVELILK	10	Unmodified	_SKDNVELILK_					0	0	0		ENST00000551455.5_1_12:110388962-110434038:-|nuORF;nc|ENSG00000139436|Q14161-2|GIT2;nc|ENSG00000139436|Q14161-11|GIT2;nc|ENSG00000139436|Q14161-7|GIT2;nc|ENSG00000139436|Q14161-6|GIT2;nc|ENSG00000139436|Q14161-10|GIT2;nc|ENSG00000139436|Q14161-8|GIT2;nc|ENSG00000139436|Q14161-4|GIT2;nc|ENSG00000139436|Q14161-5|GIT2;nc|ENSG00000139436|Q14161-3|GIT2;ENSG00000139436|ENST00000355312|GIT2;ENST00000547694.2_1_12:110390821-110397718:-|nuORF	ENST00000551455.5_1_12:110388962-110434038:-|nuORF	ENST00000551455.5_1_12:110388962-110434038:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.84375	2	579.840071	1157.66559	3.115	0.0018062	3.3738	0.0019563	6.4888	0.0037625	579.8421153406522	102.31	1.4996	102.26	101.49	102.99	-0.047005					86	35	4	0	0	0	0.86348	1	11184	11184		31.53	8.0071	1	1243200			54150	4369	36116	36131	61356	61356					0.09306239366037516
SKDTTLIHQI	10	Unmodified	_SKDTTLIHQI_					0	0	0		ENSG00000250844|ENST00000504209|USP17L18;ENSG00000223569|ENST00000456464|USP17L15;ENSG00000232264|ENST00000504481|USP17L24;ENSG00000250745|ENST00000506151|USP17L20;ENSG00000249811|ENST00000506414|USP17L21;ENSG00000249104|ENST00000511568|USP17L17;ENSG00000248933|ENST00000511280|USP17L22;ENSG00000248920|ENST00000515566|USP17L19;ENSG00000233136|ENST00000457736|USP17L11;ENSG00000232399|ENST00000429667|USP17L13;ENSG00000235780|ENST00000515574|USP17L27;ENSG00000231637|ENST00000511681|USP17L29;ENSG00000231051|ENST00000504543|USP17L28;ENSG00000230430|ENST00000509271|USP17L25;ENSG00000229579|ENST00000509660|USP17L26;ENSG00000228856|ENST00000504104|USP17L30;ENSG00000227551|ENST00000415041|USP17L12;ENSG00000227140|ENST00000507227|USP17L5;ENSG00000225327|ENST00000530484|USP17L3;ENSG00000223443|ENST00000333796|USP17L2;ENSG00000226430|ENST00000530447|USP17L7;ENSG00000231396|ENST00000417945|USP17L10;ENSG00000236125|ENST00000526929|USP17L4;ENSG00000237038|ENST00000527080|USP17L8;nc|ENSG00000205946|Q6QN14|USP17L6P	ENSG00000250844|ENST00000504209|USP17L18	ENSG00000250844|ENST00000504209|USP17L18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.320556640625	2	578.322045	1154.62954	-1.36	-0.00078649	-1.1758	-0.00067998	-2.5357	-0.0014665	578.3215937705486	92.438	2.8262	92.624	91.324	94.15	0.18582					174	66	3	0	0	0	0.86225	1	9307	9307		32.751	2.1817	1	562630			54151	8851	36117	36132	61357	61357					0.058407821891933054
SKDVKALAKQA	11	Unmodified	_SKDVKALAKQA_					0	0	0			REV__ENST00000465541.1_1_13:51524391-51530607:+|nuORF	REV__ENST00000465541.1_1_13:51524391-51530607:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.8434448242188	2	579.845687	1157.67682	0.46014	0.00026681	-3.2581	-0.0018892	-2.7979	-0.0016224	579.8436677237017	102.22	1.1397	102.27	101.85	102.99	0.043198					70	27	3	0	0	0	0.72106	1	11043	11043		28.081	0	1	1168900	+		54152	19287	36118	36133	61358	61358					0.10429061460172306
SKDVKSEKLTT	11	Unmodified	_SKDVKSEKLTT_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3473510742188	2	618.345717	1234.67688	-0.1645	-0.00010172	0.59178	0.00036593	0.42729	0.00026421	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.67778	1	9864	9864		35.152	0	1	511870			54153	3217	36119	36134	61359	61359					0.06893016669528151
SKEDYYGNG	9	Unmodified	_SKEDYYGNG_					0	0	0		ENSG00000154415|ENST00000284601|PPP1R3A	ENSG00000154415|ENST00000284601|PPP1R3A	ENSG00000154415|ENST00000284601|PPP1R3A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3129272460938	2	516.717079	1031.4196	0.55221	0.00028533	-0.54037	-0.00027922	0.01183	6.113E-06	516.7166289339183	31.744	0.81236	31.851	31.548	32.36	0.10707					32	18	2	0	0	0	0.20789	1	2203	2203		54.776	20.604	1	273760			54154	5276	36120	36135	61360	61360					-0.09484880483796587
SKEILNTVF	9	Unmodified	_SKEILNTVF_					0	0	0			REV__nc|ENSG00000057252|P35610-3|SOAT1	REV__nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.7942504882812	2	525.795132	1049.57571	-0.041019	-2.1568E-05	-0.38244	-0.00020108	-0.42345	-0.00022265	525.7948668544304	59.059	0.58398	59.045	58.809	59.393	-0.013729					30	17	2	0	0	0	0.68711	1	5424	5424		41.427	0	1	161250	+		54155	16425	36121	36136	61361	61361					0.052906097574805244
SKEIRRAE	8	Unmodified	_SKEIRRAE_					0	0	0		ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7801818847656	2	494.780348	987.546142	-0.98597	-0.00048784	1.2423	0.00061469	0.25638	0.00012685	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.88601	1	8355	8355		34.173	3.6689	1	385180			54156	3811	36122	36137	61362	61362					0.051870905319901794
SKEKASLI	8	Unmodified	_SKEKASLI_					0	0	0			REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2633972167969	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.90465	2	2012	1978;2012		45.952	1.7665	1	11160000	+		54157	24893	36123	36138	61363;61364	61364					0.07010669040232642
SKEKASLI	8	Unmodified	_SKEKASLI_					0	0	0			REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2635803222656	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.89043	1	2606	2606		35.618	0	1	22924000	+		54158	24893	36123	36138	61365	61365					0.07010669040232642
SKEKASLI	8	Unmodified	_SKEKASLI_					0	0	0			REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2629699707031	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.89494	1	2527	2527		37.159	5.2042	1	22029000	+		54159	24893	36123	36138	61366	61366					0.07010669040232642
SKEKASLI	8	Unmodified	_SKEKASLI_					0	0	0			REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26336669921875	2	438.263468	874.512382	0.27759	0.00012166	-1.0434	-0.00045727	-0.76577	-0.00033561	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.89043	1	2701	2701		35.618	0	1	85249000	+		54160	24893	36123	36138	61367	61367					0.07010669040232642
SKEKGLLT	8	Unmodified	_SKEKGLLT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-3|WAPL;REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.263671875	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.88185	1	2760	2760		32.812	2.3088	1	2361100	+		54161	29698;29697	36124	36139	61368	61368					0.07010669040232642
SKELERRA	8	Unmodified	_SKELERRA_					0	0	0			REV__nc|ENSG00000103710|Q9NYN1-2|RASL12	REV__nc|ENSG00000103710|Q9NYN1-2|RASL12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.780029296875	2	494.780348	987.546142	-0.60063	-0.00029718	0.65872	0.00032592	0.05809	2.8742E-05	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.87064	1	8462	8462		29.15	4.9468	1	707910	+		54162	29751	36125	36140	61369	61369					0.05187090532001548
SKELFNKKL	9	Unmodified	_SKELFNKKL_					0	0	0			REV__ENSG00000137766|ENST00000260323|UNC13C	REV__ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.829833984375	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.69624	1	8863	8863		40.778	1.5253	1	3935500	+		54163	19405	36126	36141	61370	61370					0.10094577919812764
SKELRATV	8	Unmodified	_SKELRATV_					0	0	0		ENSG00000130762|ENST00000378378|ARHGEF16;nc|ENSG00000130762|Q5VV41-2|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	ENSG00000130762|ENST00000378378|ARHGEF16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.2664489746094	2	452.266542	902.51853	1.5459	0.00069917	-1.7833	-0.00080653	-0.23739	-0.00010736	452.26560314564324	36.283	0.78641	36.723	36.493	37.279	0.44043					27	18	2	0	0	0	0.8347	1	2853	2853		23.042	0	1	1965800			54164	3679	36127	36142	61371	61371					0.0633718727174255
SKELRLKWIL	10	Unmodified	_SKELRLKWIL_					0	0	0			REV__ENST00000424881.5_3_7:99158252-99169400:+|nuORF	REV__ENST00000424881.5_3_7:99158252-99169400:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4046020507812	2	643.403173	1284.79179	2.6792	0.0017238	3.2892	0.0021163	5.9684	0.0038401	643.4052640495355	107.03	1.0145	106.99	106.79	107.81	-0.034134					59	23	3	0	0	0	0.86471	1	11825	11825		30.318	2.2362	1	2103900	+		54165	26525	36128	36143	61372	61372					0.16078790661981657
SKELRLKWIL	10	Unmodified	_SKELRLKWIL_					0	0	0			REV__ENST00000424881.5_3_7:99158252-99169400:+|nuORF	REV__ENST00000424881.5_3_7:99158252-99169400:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4059448242188	2	643.403173	1284.79179	1.7783	0.0011441	2.5766	0.0016578	4.3549	0.0028019	643.4046886151041	105.77	1.7293	105.8	105.04	106.77	0.038322					167	40	5	0	0	0	0.86218	1	11544	11544		32.812	1.2826	1	14066000	+		54166	26525	36128	36143	61373	61373					0.16078790661981657
SKELRLKWIL	10	Unmodified	_SKELRLKWIL_					0	0	0			REV__ENST00000424881.5_3_7:99158252-99169400:+|nuORF	REV__ENST00000424881.5_3_7:99158252-99169400:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4036865234375	2	643.403173	1284.79179	1.777	0.0011433	4.2737	0.0027497	6.0507	0.0038931	643.4059831518348	106.95	1.1451	106.98	106.72	107.86	0.03688					79	26	4	0	0	0	0.82886	2	11696	11696;11744		37.812	1.3648	1	1597700	+		54167	26525	36128	36143	61374;61375	61374					0.16078790661981657
SKELRLKWIL	10	Unmodified	_SKELRLKWIL_					0	0	0			REV__ENST00000424881.5_3_7:99158252-99169400:+|nuORF	REV__ENST00000424881.5_3_7:99158252-99169400:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4061889648438	2	643.403173	1284.79179	1.6039	0.001032	2.8597	0.0018399	4.4636	0.0028719	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.86218	1	11324	11324		32.812	2.4947	1	21138000	+		54168	26525	36128	36143	61376	61376					0.16078790661981657
SKELRLKWIL	10	Unmodified	_SKELRLKWIL_					0	0	0			REV__ENST00000424881.5_3_7:99158252-99169400:+|nuORF	REV__ENST00000424881.5_3_7:99158252-99169400:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4056396484375	2	643.403173	1284.79179	0.94326	0.0006069	3.082	0.001983	4.0253	0.0025899	643.4049918963857	105.64	1.1738	105.75	104.98	106.16	0.10766					144	29	6	0	0	0	0.86218	1	11310	11310		32.812	0.061884	1	23114000	+		54169	26525	36128	36143	61377	61377					0.16078790661981657
SKETIGKI	8	Unmodified	_SKETIGKI_					0	0	0		nc|ENSG00000165816|Q5GFL6-2|VWA2;ENSG00000165816|ENST00000392982|VWA2	nc|ENSG00000165816|Q5GFL6-2|VWA2	nc|ENSG00000165816|Q5GFL6-2|VWA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2639465332031	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.82658	1	2397	2397		21.96	1.4781	1	3507500			54170	6129	36129	36144	61378	61378					0.07010669040232642
SKETRIFIR	9	Unmodified	_SKETRIFIR_					0	0	0			REV__chr4:17840240-17842310|38|19.13|0.08|7.84|+|1|None,NCAPG|1	REV__chr4:17840240-17842310|38|19.13|0.08|7.84|+|1|None,NCAPG|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.3407592773438	2	575.340572	1148.66659	-1.4031	-0.00080726	1.4395	0.00082822	0.036418	2.0953E-05	575.341163197935	38.821	0.945	38.832	38.358	39.303	0.011173					51	21	3	0	0	0	0.7932	1	2715	2715		25.574	1.0549	1	287500	+		54171	15828	36130	36145	61379	61379					0.09820498525596122
SKEVKEIL	8	Unmodified	_SKEVKEIL_					0	0	0		ENST00000508867.5_1_5:74842847-74877278:+|nuORF;ENST00000506928.5_1_5:74842847-74879138:+|nuORF;nc|ENSG00000122008|Q9UBT6-7|POLK;nc|ENSG00000122008|Q9UBT6-4|POLK;nc|ENSG00000122008|Q9UBT6-6|POLK;nc|ENSG00000122008|Q9UBT6-2|POLK;nc|ENSG00000122008|Q9UBT6-5|POLK;nc|ENSG00000122008|Q9UBT6-3|POLK;nc|ENSG00000122008|Q9UBT6-8|POLK;ENSG00000122008|ENST00000241436|POLK	ENST00000508867.5_1_5:74842847-74877278:+|nuORF	ENST00000508867.5_1_5:74842847-74877278:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.30487060546875	2	473.2844	944.554247	-1.653	-0.00078233	2.8084	0.0013292	1.1554	0.00054686	473.2855296385482	46.423	0.41586	47.346	47.191	47.607	0.92315					10	9	2	0	0	0	0.4196	1	4383	4383		37.159	0	1	407160			54172	3205	36131	36146	61380	61380					0.079752247287729
SKEVKTAL	8	Unmodified	_SKEVKTAL_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3;ENST00000510228.1_1_5:94882707-94882854:-|nuORF	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2623596191406	2	438.263468	874.512382	-2.4769	-0.0010856	0.22797	9.991E-05	-2.249	-0.00098564	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.89494	1	3733	3733		37.159	1.5408	1	246320000			54173	8303	36132	36147	61381	61381					0.07010669040232642
SKEVRIRFSGT	11	Unmodified	_SKEVRIRFSGT_					0	0	0			REV__ENST00000592407.1_1_17:75372099-75372147:+|nuORF	REV__ENST00000592407.1_1_17:75372099-75372147:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3604125976562	2	640.359493	1278.70443	-0.024279	-1.5547E-05	-0.77441	-0.0004959	-0.79869	-0.00051145	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.6493	1	10187	10187		38.754	0	1	448130	+		54174	29212	36133	36148	61382	61382					0.07622964720417258
SKFIFVTQTAS	11	Unmodified	_SKFIFVTQTAS_					0	0	0			REV__ENST00000584471.5_1_17:65375300-65375444:+|nuORF	REV__ENST00000584471.5_1_17:65375300-65375444:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	410.223388671875	3	410.223923	1227.64994	1.3209	0.00054188	-2.9839	-0.001224	-1.6629	-0.00068217	410.2225238318993	24.847	0.76616	24.519	24.161	24.927	-0.32825					33	16	3	0	0	0	0.66858	1	1225	1225		36.528	8.4464	1	279890	+		54175	29080	36134	36149	61383	61383					0.0452195284899517
SKFIFVTQTAS	11	Unmodified	_SKFIFVTQTAS_					0	0	0			REV__ENST00000584471.5_1_17:65375300-65375444:+|nuORF	REV__ENST00000584471.5_1_17:65375300-65375444:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	410.223923	1227.64994	-1.932	-0.00079254	0.65528	0.00026881	-1.2767	-0.00052373	410.5577402314001	24.159	0.067316	24.217	24.162	24.229	0.058167	-0.10634	0.0049962	NaN	36.528	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12256	+		54176	29080	36134	36149							0.0452195284899517
SKFIFVTQTAS	11	Unmodified	_SKFIFVTQTAS_					0	0	0			REV__ENST00000584471.5_1_17:65375300-65375444:+|nuORF	REV__ENST00000584471.5_1_17:65375300-65375444:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	410.223923	1227.64994	1.9929	0.00081755	-3.9429	-0.0016175	-1.9499	-0.00079991	410.2222331024821	24.748	0.84428	24.234	23.968	24.812	-0.51365	-0.089165	-0.00066265	NaN	36.528	46	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	209910	+		54177	29080	36134	36149							0.0452195284899517
SKFPLKSLSPL	11	Unmodified	_SKFPLKSLSPL_					0	0	0			REV__ENST00000504959.5_1_4:186260544-186290945:+|nuORF	REV__ENST00000504959.5_1_4:186260544-186290945:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.25018310546875	3	406.24818	1215.72271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.11	1	21.046	20.546	21.546	-0.064058								0	0	0	0.56276	1	566	566		26.75	1.6237	1		+		54178	17773	36135	36150	61384	61384					0.12347706642412959
SKFPSHIVPIL	11	Unmodified	_SKFPSHIVPIL_					0	0	0		ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF	ENSG00000157796|ENST00000399820|WDR19	ENSG00000157796|ENST00000399820|WDR19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.3716430664062	2	619.368798	1236.72304	2.9405	0.0018212	2.8596	0.0017711	5.8001	0.0035924	619.3710459342678	101.7	2.0362	101.65	101.12	103.16	-0.049828					124	48	5	0	0	0	0.66929	1	11103	11103		36.447	6.129	1	3045300			54179	5449	36136	36151	61385	61385					0.11415126362271621
SKFQKRKM	8	Unmodified	_SKFQKRKM_					0	0	0		nc|ENSG00000138182|Q96Q89-4|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B	nc|ENSG00000138182|Q96Q89-4|KIF20B	nc|ENSG00000138182|Q96Q89-4|KIF20B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.3053588867188	2	526.805311	1051.59607	-0.036904	-1.9441E-05	-1.1847	-0.0006241	-1.2216	-0.00064354	527.3054504644606	99.375	1.7033	99.425	98.884	100.59	0.04982					129	39	5	0	0	0	0.85277	1	10552	10552		25.45	1.2474	1	1726400			54180	4280	36137	36152	61386	61386					0.07233501936298126
SKGKKSAR	8	Unmodified	_SKGKKSAR_					0	0	0		ENST00000448327.1_1_6:53493192-53495881:+|nuORF	ENST00000448327.1_1_6:53493192-53495881:+|nuORF	ENST00000448327.1_1_6:53493192-53495881:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.24505615234375	2	431.266876	860.519199	1.4468	0.00062395	-3.3284	-0.0014354	-1.8816	-0.00081147	431.265194999182	27.787	0.26483	27.532	27.411	27.676	-0.25465					7	5	2	0	0	0	0.4196	1	1640	1640		5.9211	0	1	20288			54181	11857	36138	36153	61387	61387					0.08336026711469913
SKGRLARRLP	10	Unmodified	_SKGRLARRLP_					0	0	0			REV__ENST00000553066.5_1_12:56551506-56551743:+|nuORF	REV__ENST00000553066.5_1_12:56551506-56551743:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3670654296875	2	577.367456	1152.72036	0.64818	0.00037424	-2.4151	-0.0013944	-1.7669	-0.0010202	577.3659582171192	102.04	3.0704	102.23	101.84	104.91	0.19484					206	76	5	0	0	0	0.85438	1	10888	10888		16.473	3.514	1	17266000	+		54182	28636	36139	36154	61388	61388					0.15010715747962422
SKGRRLWKVS	10	Unmodified	_SKGRRLWKVS_					0	0	0		ENST00000326035.6_1_5:43280652-43280736:+|nuORF	ENST00000326035.6_1_5:43280652-43280736:+|nuORF	ENST00000326035.6_1_5:43280652-43280736:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.58343505859375	3	406.247285	1215.72002	5.5965	0.0022736	-0.24909	-0.00010119	5.3474	0.0021724	406.581695337414	111.5	0.49822	111.55	111.24	111.74	0.049095					37	18	3	0	0	0	0.86621	1	13532	13532		26.063	0.17167	1	805300			54183	10075	36140	36155	61389	61389					0.12079296028105091
SKGRVLRG	8	Unmodified	_SKGRVLRG_					0	0	0			REV__ENST00000430889.2_1_12:54449449-54449491:+|nuORF	REV__ENST00000430889.2_1_12:54449449-54449491:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.7736511230469	2	436.774868	871.535184	-0.76279	-0.00033317	-2.0845	-0.00091048	-2.8473	-0.0012436	436.773961366412	27.779	2.36	27.682	26.915	29.275	-0.096947					107	54	4	0	0	0	0.80308	1	1636	1636		16.473	0.83693	1	1192900	+		54184	26611	36141	36156	61390	61390					0.09427732948381617
SKGSWGLA	8	Unmodified	_SKGSWGLA_					0	0	0		ENST00000372396.3_1_1:44170508-44170676:+|nuORF	ENST00000372396.3_1_1:44170508-44170676:+|nuORF	ENST00000372396.3_1_1:44170508-44170676:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.7397766113281	2	403.213778	804.413003	1.0975	0.00044254	0.84804	0.00034194	1.9456	0.00078448	403.2141217061541	34.849	0.4695	35.23	34.934	35.404	0.3812					19	11	2	0	0	0	0.4196	1	2633	2633		12.959	0	1	207560			54185	10697	36142	36157	61391	61391					0.0029727114613251615
SKGVTTKI	8	Unmodified	_SKGVTTKI_					0	0	0			REV__ENSG00000214013|ENST00000318010|GANC	REV__ENSG00000214013|ENST00000318010|GANC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.25738525390625	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.80959	1	1050	1050		15.642	0.77694	1	1763000	+		54186	23642	36143	36158	61392	61392					0.07886686385802477
SKHALRDL	8	Unmodified	_SKHALRDL_					0	0	0		ENST00000553986.1_1_14:60616802-60619887:-|nuORF	ENST00000553986.1_1_14:60616802-60619887:-|nuORF	ENST00000553986.1_1_14:60616802-60619887:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.27020263671875	2	470.272158	938.529764	1.0926	0.00051384	-1.1185	-0.00052601	-0.025882	-1.2171E-05	470.27159576530556	91.919	2.3675	92.368	91.756	94.123	0.44959					104	55	3	0	0	0	0.90983	1	10938	10938		42.396	6.7778	1	778610			54187	13714	36144	36159	61393	61393					0.058040093658860314
SKHIIGIGKI	10	Unmodified	_SKHIIGIGKI_					0	0	0			REV__chr2:12558444-12561100|26|17.69|0.19|6.53|+|1|MIR3681HG,MIR3681HG|1	REV__chr2:12558444-12561100|26|17.69|0.19|6.53|+|1|MIR3681HG,MIR3681HG|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3402709960938	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.86587	1	10504	10504		29.17	3.7199	1	2530900	+		54188	15732	36145	36160	61394	61394					0.14086588019335977
SKHISRPA	8	Unmodified	_SKHISRPA_					0	0	0			REV__ENST00000529357.5_1_17:43475293-43487738:-|nuORF	REV__ENST00000529357.5_1_17:43475293-43487738:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.2589111328125	2	448.259051	894.503549	-0.14447	-6.4758E-05	0.22166	9.9363E-05	0.077198	3.4605E-05	448.2590229245312	90.101	3.0472	90.17	88.225	91.272	0.068695					215	72	5	0	0	0	0.85277	1	9214	9214		25.45	1.2474	1	2722700	+		54189	20652	36146	36161	61395	61395					0.05207740194418875
SKHISRPA	8	Unmodified	_SKHISRPA_					0	0	0			REV__ENST00000529357.5_1_17:43475293-43487738:-|nuORF	REV__ENST00000529357.5_1_17:43475293-43487738:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.2585754394531	2	448.259051	894.503549	-1.7824	-0.000799	1.7883	0.00080162	0.0058491	2.6219E-06	448.2597133351224	89.882	2.6909	90.057	88.956	91.647	0.17579					189	63	5	0	0	0	0.87479	1	8995	8995		30.504	0	1	2344600	+		54190	20652	36146	36161	61396	61396					0.05207740194418875
SKHKLTKAAS	10	Unmodified	_SKHKLTKAAS_					0	0	0		ENSG00000075568|ENST00000186436|TMEM131;ENST00000485245.2_1_2:98377202-98377406:-|nuORF	ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.8119506835938	2	535.819473	1069.62439	0.028491	1.5266E-05	-3.7969	-0.0020344	-3.7684	-0.0020192	535.817723789235	98.967	1.5092	99.189	98.744	100.25	0.22262					50	35	2	0	0	0	0.86047	1	10322	10322		23.523	2.5758	1	409340			54191	1337	36147	36162	61397	61397					0.09236523117215256
SKHKRKHK	8	Unmodified	_SKHKRKHK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8275756835938	2	524.827966	1047.64138	-0.63595	-0.00033377	-1.2498	-0.00065593	-1.8858	-0.0009897	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.84341	1	10302	10302		24.203	1.1603	1	15330000			54192	7804	36148	36163	61398	61398					0.1194648851369493
SKHKRKHK	8	Unmodified	_SKHKRKHK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8270263671875	2	524.827966	1047.64138	-0.038995	-2.0466E-05	-2.0451	-0.0010733	-2.0841	-0.0010938	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.8347	1	10907	10907		23.042	3.6825	1	26414000			54193	7804	36148	36163	61399	61399					0.1194648851369493
SKHKRKHK	8	Unmodified	_SKHKRKHK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.8273315429688	2	524.827966	1047.64138	1.241	0.00065132	-2.525	-0.0013252	-1.284	-0.00067389	524.8265446316465	102.17	1.0632	102.22	101.85	102.91	0.04319					53	25	3	0	0	0	0.86288	1	10992	10992		26.796	5.0938	1	396530			54194	7804	36148	36163	61400	61400					0.1194648851369493
SKHKRKHK	8	Unmodified	_SKHKRKHK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.827392578125	2	524.827966	1047.64138	-0.1321	-6.933E-05	-2.099	-0.0011016	-2.2311	-0.001171	524.8267772586088	99.003	3.4379	99.226	98.52	101.96	0.22263					298	81	5	0	0	0	0.8347	1	10432	10432		23.042	2.5607	1	31133000			54195	7804	36148	36163	61401	61401					0.1194648851369493
SKHKRKHK	8	Unmodified	_SKHKRKHK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.826904296875	2	524.827966	1047.64138	-0.12962	-6.8027E-05	-0.96097	-0.00050434	-1.0906	-0.00057237	524.8273126123019	102.03	1.1787	102.23	101.8	102.98	0.19483					72	28	3	0	0	0	0.86677	1	10732	10732		27.882	4.8398	1	693200			54196	7804	36148	36163	61402	61402					0.1194648851369493
SKHKRKHK	8	Unmodified	_SKHKRKHK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8275146484375	2	524.827966	1047.64138	0.82695	0.00043401	-2.0416	-0.0010715	-1.2146	-0.00063748	524.826769505368	102.16	1.0919	102.29	101.89	102.98	0.13523					72	26	3	0	0	0	0.8347	2	10748	10748;10771		29.15	7.1897	1	650470			54197	7804	36148	36163	61403;61404	61403					0.1194648851369493
SKHKSSSKI	9	Unmodified	_SKHKSSSKI_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29052734375	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.76764	1	10051	10051		34.173	0	1	9038000			54198	5881	36149	36164	61405	61405					0.06628261191815454
SKHLKKWKTI	10	Unmodified	_SKHLKKWKTI_					0	0	0		ENST00000261425.7_2_4:39064576-39077703:+|nuORF	ENST00000261425.7_2_4:39064576-39077703:+|nuORF	ENST00000261425.7_2_4:39064576-39077703:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	423.5975036621094	3	423.599435	1267.77648	-1.87	-0.00079214	-2.3626	-0.0010008	-4.2326	-0.0017929	423.59834897722675	105.64	2.006	105.71	105.05	107.06	0.073112					176	48	5	0	0	0	0.86776	1	11158	11158		26.75	1.6237	1	4588600			54199	9409	36150	36165	61406	61406					0.15329923864783268
SKHLRIHTK	9	Unmodified	_SKHLRIHTK_					0	0	0		nc|ENSG00000274349|Q5TYW1-2|ZNF658;nc|ENSG00000198416|Q4V348|ZNF658B;ENST00000602828.1_9:39444499-39446956:-|nuORF;ENSG00000274349|ENST00000621410|ZNF658;ENST00000377618.4_9:39444499-39464431:-|nuORF	nc|ENSG00000274349|Q5TYW1-2|ZNF658	nc|ENSG00000274349|Q5TYW1-2|ZNF658	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3401489257812	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.76764	1	11385	11385		34.173	3.6689	1	81463000			54200	8995	36151	36166	61407	61407					0.11267337965296065
SKHLRIHTK	9	Unmodified	_SKHLRIHTK_					0	0	0		nc|ENSG00000274349|Q5TYW1-2|ZNF658;nc|ENSG00000198416|Q4V348|ZNF658B;ENST00000602828.1_9:39444499-39446956:-|nuORF;ENSG00000274349|ENST00000621410|ZNF658;ENST00000377618.4_9:39444499-39464431:-|nuORF	nc|ENSG00000274349|Q5TYW1-2|ZNF658	nc|ENSG00000274349|Q5TYW1-2|ZNF658	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3402099609375	2	560.340907	1118.66726	1.3859	0.00077659	-2.1551	-0.0012076	-0.76919	-0.00043101	560.3395943514043	105.68	1.8194	105.72	105.08	106.9	0.03833					99	42	3	0	0	0	0.7932	1	11523	11523		24.519	3.5723	1	928560			54201	8995	36151	36166	61408	61408					0.11267337965296065
SKHPMDSKGE	10	Unmodified	_SKHPMDSKGE_					0	0	0		nc|ENSG00000100364|Q6ICG6-3|KIAA0930;ENSG00000100364|ENST00000336156|KIAA0930;nc|ENSG00000100364|Q6ICG6-2|KIAA0930	nc|ENSG00000100364|Q6ICG6-3|KIAA0930	nc|ENSG00000100364|Q6ICG6-3|KIAA0930	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.259033203125	2	558.26113	1114.50771	-0.77268	-0.00043136	-2.3845	-0.0013312	-3.1572	-0.0017625	558.2596940825973	46.99	0.84644	46.976	46.614	47.461	-0.013821					51	22	3	0	0	0	0.63899	1	3829	3829		47.96	1.9873	1	933770			54202	1834	36152	36167	61409	61409					-0.0449658316483692
SKHPMDSKGE	10	Unmodified	_SKHPMDSKGE_					0	0	0		nc|ENSG00000100364|Q6ICG6-3|KIAA0930;ENSG00000100364|ENST00000336156|KIAA0930;nc|ENSG00000100364|Q6ICG6-2|KIAA0930	nc|ENSG00000100364|Q6ICG6-3|KIAA0930	nc|ENSG00000100364|Q6ICG6-3|KIAA0930	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.2593383789062	2	558.26113	1114.50771	0.48192	0.00026903	-3.6371	-0.0020304	-3.1552	-0.0017614	558.2589699137421	46.954	0.78132	46.95	46.68	47.461	-0.0041618					48	19	3	0	0	0	0.27582	2	3848	3848;3858		75.043	10.836	1	1051900			54203	1834	36152	36167	61410;61411	61410					-0.0449658316483692
SKHSAIRP	8	Unmodified	_SKHSAIRP_					0	0	0		nc|ENSG00000091181|Q01344-3|IL5RA;nc|ENSG00000091181|Q01344-2|IL5RA;nc|ENSG00000091181|Q01344-4|IL5RA;ENSG00000091181|ENST00000446632|IL5RA	nc|ENSG00000091181|Q01344-3|IL5RA	nc|ENSG00000091181|Q01344-3|IL5RA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.2588195800781	2	448.259051	894.503549	-1.2915	-0.00057894	1.2791	0.00057339	-0.012395	-5.5564E-06	448.25951221432746	89.806	3.6834	90.019	87.898	91.582	0.21272					200	88	5	0	0	0	0.79929	1	9025	9025		18.324	0	1	3037400			54204	1673	36153	36168	61412	61412					0.05207740194418875
SKHSKGKK	8	Unmodified	_SKHSKGKK_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2744140625	2	450.274701	898.534849	-1.247	-0.00056151	1.4065	0.00063329	0.15942	7.1784E-05	450.2752637415859	95.005	1.8382	95.236	94.9	96.739	0.23103					104	43	3	0	0	0	0.82658	1	9728	9728		21.96	1.013	1	829000	+		54205	20445	36154	36169	61413	61413					0.08152313228526964
SKIGLLTSG	9	Unmodified	_SKIGLLTSG_					0	0	0		nc|ENSG00000204131|Q5HYW2-2|NHSL2;ENSG00000204131|ENST00000633930|NHSL2	nc|ENSG00000204131|Q5HYW2-2|NHSL2	nc|ENSG00000204131|Q5HYW2-2|NHSL2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26123046875	2	438.263468	874.512382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.489	1	39.577	39.077	40.077	0.088375								0	0	0	0.30416	1	2427	2427		29.15	1.2673	1				54206	8417	36155	36170	61414	61414					0.07010669040221273
SKIGSTKL	8	Unmodified	_SKIGSTKL_					0	0	0			REV__nc|ENSG00000135374|Q9UKW6-4|ELF5	REV__nc|ENSG00000135374|Q9UKW6-4|ELF5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2574157714844	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.80959	1	1039	1039		15.642	2.6826	1	1763000	+		54207	19214	36156	36171	61415	61415					0.07886686385802477
SKIKAHLW	8	Unmodified	_SKIKAHLW_					0	0	0		ENSG00000100652|ENST00000216540|SLC10A1	ENSG00000100652|ENST00000216540|SLC10A1	ENSG00000100652|ENST00000216540|SLC10A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7956848144531	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.87922	1	3483	3483		31.955	1.4512	1	2891800			54208	1858	36157	36172	61416	61416					0.08446074267976655
SKIKAHLW	8	Unmodified	_SKIKAHLW_					0	0	0		ENSG00000100652|ENST00000216540|SLC10A1	ENSG00000100652|ENST00000216540|SLC10A1	ENSG00000100652|ENST00000216540|SLC10A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7955627441406	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.84341	1	3706	3706		24.203	2.2429	1	1240000			54209	1858	36157	36172	61417	61417					0.08446074267976655
SKIKAHLW	8	Unmodified	_SKIKAHLW_					0	0	0		ENSG00000100652|ENST00000216540|SLC10A1	ENSG00000100652|ENST00000216540|SLC10A1	ENSG00000100652|ENST00000216540|SLC10A1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79443359375	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.863	1	56.863	56.363	57.363	0								0	0	0	0.29755	1	4868	4868		24.203	2.5004	1				54210	1858	36157	36172	61418	61418					0.08446074267976655
SKIKSTSG	8	Unmodified	_SKIKSTSG_					0	0	0		ENSG00000110756|ENST00000349215|HPS5;nc|ENSG00000110756|Q9UPZ3-2|HPS5;ENST00000352460.7_1_11:18303495-18317646:-|nuORF	ENSG00000110756|ENST00000349215|HPS5	ENSG00000110756|ENST00000349215|HPS5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2327880859375	2	404.232168	806.449782	2.8761	0.0011626	-0.84201	-0.00034037	2.0341	0.00082225	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.88601	1	8640	8640		34.173	3.6689	1	4761400			54211	2539	36158	36173	61419	61419					0.038815229720512434
SKIPLPTAM	9	Unmodified	_SKIPLPTAM_					0	0	0		ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27740478515625	2	479.275521	956.536489	0.61468	0.0002946	3.1717	0.0015201	3.7864	0.0018147	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.78124	1	7824	7824		30.318	1.1682	1	1802300			54212	1337	36159	36174	61420	61420					0.05648186202233774
SKIPLPTAM	9	Unmodified	_SKIPLPTAM_					0	0	0		ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27783203125	2	479.275521	956.536489	0.63867	0.0003061	3.2635	0.0015641	3.9021	0.0018702	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.76255	1	8601	8601		35.618	3.6634	1	6593200			54213	1337	36159	36174	61421	61421					0.05648186202233774
SKIRINLQKML	11	Unmodified	_SKIRINLQKML_					0	0	0			REV__ENST00000340535.11_1_1:222824030-222824207:+|nuORF	REV__ENST00000340535.11_1_1:222824030-222824207:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.60894775390625	3	448.611235	1342.81188	-1.3621	-0.00061104	-2.7229	-0.0012215	-4.085	-0.0018326	448.6097970890054	75.668	1.3969	75.668	74.988	76.385	0					143	49	4	0	0	0	0.75779	1	6853	6853		20.315	2.4819	1	388770	+		54214	25245	36160	36175	61422	61422					0.15418218330273703
SKISALKGSKG	11	Unmodified	_SKISALKGSKG_					0	0	0		nc|ENSG00000105793|A4D1E9-3|GTPBP10;ENSG00000105793|ENST00000222511|GTPBP10	nc|ENSG00000105793|A4D1E9-3|GTPBP10	nc|ENSG00000105793|A4D1E9-3|GTPBP10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3269653320312	2	538.327131	1074.63971	-0.15628	-8.4129E-05	0.5651	0.00030421	0.40882	0.00022008	538.3273734998361	103.57	1.2288	103.57	103.11	104.34	-0.0016403					90	29	4	0	0	0	0.70584	1	11086	11086		30.569	1.3988	1	1025700			54215	2252	36161	36176	61423	61423					0.10537389914429696
SKISRTKH	8	Unmodified	_SKISRTKH_					0	0	0			REV__ENST00000310045.7_1_18:65182387-65182429:-|nuORF	REV__ENST00000310045.7_1_18:65182387-65182429:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.7852478027344	2	478.785433	955.556313	0.70537	0.00033772	0.63532	0.00030418	1.3407	0.0006419	478.78492064616836	92.181	2.2722	92.339	91.473	93.745	0.15829					125	53	4	0	0	0	0.90523	1	9328	9328		40.778	6.6056	1	756310	+		54216	24881	36162	36177	61424	61424					0.0767569825721921
SKKAFLHL	8	Unmodified	_SKKAFLHL_					0	0	0		nc|ENSG00000060656|Q92729-3|PTPRU;ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU;ENST00000465525.6_1_1:29647190-29652170:+|nuORF	nc|ENSG00000060656|Q92729-3|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2878112792969	2	472.28982	942.565087	-0.38046	-0.00017969	-3.8175	-0.001803	-4.198	-0.0019827	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.90465	1	11497	11497		40.573	12.69	1	24731000			54217	1066	36163	36178	61425	61425					0.09150671893701201
SKKALGPPLGL	11	Unmodified	_SKKALGPPLGL_					0	0	0			REV__nc|ENSG00000011451|O95785|WIZ	REV__nc|ENSG00000011451|O95785|WIZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	540.8418579101562	2	540.842416	1079.67028	0.31832	0.00017216	-0.88585	-0.00047911	-0.56753	-0.00030695	540.8422303734262	74.893	0.53185	74.939	74.705	75.237	0.04509					26	14	2	0	0	0	0.65746	1	7278	7278		37.812	4.9991	1	117520	+		54218	16186	36164	36179	61426	61426					0.13363168299474637
SKKALPPEKK	10	Unmodified	_SKKALPPEKK_					0	0	0		ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU;ENST00000468690.2_2_1:245019158-245019479:-|nuORF	ENSG00000153187|ENST00000640218|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.3504638671875	2	563.353148	1124.69174	-1.2875	-0.00072533	-2.3785	-0.0013399	-3.666	-0.0020653	563.3516423395747	95.964	0.97999	96.03	95.589	96.569	0.06591					44	22	2	0	0	0	0.86802	1	10093	10093		27.047	4.4677	1	304430			54219	5219	36165	36180	61427	61427					0.13438553328182934
SKKARQRVF	9	Unmodified	_SKKARQRVF_					0	0	0			REV__nc|nan|Q5T0J3|C1orf220	REV__nc|nan|Q5T0J3|C1orf220	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3406372070312	2	560.340907	1118.66726	-1.1297	-0.00063301	-0.12552	-7.0334E-05	-1.2552	-0.00070335	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.67345	1	11139	11139		42.396	3.1433	1	84412000	+		54220	30325	36166	36181	61428	61428					0.11267337965318802
SKKARQRVF	9	Unmodified	_SKKARQRVF_					0	0	0			REV__nc|nan|Q5T0J3|C1orf220	REV__nc|nan|Q5T0J3|C1orf220	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3402709960938	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.78983	3	11060	11060;11072;11215		27.882	1.1893	1	81463000	+		54221	30325	36166	36181	61429;61430;61431	61429					0.11267337965318802
SKKARQRVF	9	Unmodified	_SKKARQRVF_					0	0	0			REV__nc|nan|Q5T0J3|C1orf220	REV__nc|nan|Q5T0J3|C1orf220	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3396606445312	2	560.340907	1118.66726	0.39697	0.00022244	-1.0192	-0.00057111	-0.62226	-0.00034868	560.3402827530984	106	0.77002	106.15	105.83	106.6	0.14843					63	18	5	0	0	0	0.20789	1	11284	11284		20.947	0	1	1821000	+		54222	30325	36166	36181	61432	61432					0.11267337965318802
SKKARQRVF	9	Unmodified	_SKKARQRVF_					0	0	0			REV__nc|nan|Q5T0J3|C1orf220	REV__nc|nan|Q5T0J3|C1orf220	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3401489257812	2	560.340907	1118.66726	0.86176	0.00048288	-2.22	-0.001244	-1.3582	-0.00076107	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.78058	4	10786	10786;10798;11046;11059		30.504	3.7075	1	126390000	+		54223	30325	36166	36181	61433;61434;61435;61436	61433					0.11267337965318802
SKKARQRVF	9	Unmodified	_SKKARQRVF_					0	0	0			REV__nc|nan|Q5T0J3|C1orf220	REV__nc|nan|Q5T0J3|C1orf220	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3400268554688	2	560.340907	1118.66726	-1.4185	-0.00079484	0.73158	0.00040994	-0.6869	-0.0003849	560.3412091508775	106.12	0.75266	106.18	105.94	106.69	0.053749					46	17	3	0	0	0	0.77244	1	11292	11292		32.812	3.6629	1	1449400	+		54224	30325	36166	36181	61437	61437					0.11267337965318802
SKKARQRVF	9	Unmodified	_SKKARQRVF_					0	0	0			REV__nc|nan|Q5T0J3|C1orf220	REV__nc|nan|Q5T0J3|C1orf220	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.34033203125	2	560.340907	1118.66726	-1.4185	-0.00079484	0.46581	0.00026101	-0.95269	-0.00053383	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.76255	2	12119	12119;12285		35.618	2.8059	1	4071000	+		54225	30325	36166	36181	61438;61439	61438					0.11267337965318802
SKKARQRVF	9	Unmodified	_SKKARQRVF_					0	0	0			REV__nc|nan|Q5T0J3|C1orf220	REV__nc|nan|Q5T0J3|C1orf220	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3402099609375	2	560.340907	1118.66726	2.2618	0.0012674	-3.4816	-0.0019509	-1.2198	-0.00068351	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.77244	1	12391	12391		32.812	3.6629	1	14759000	+		54226	30325	36166	36181	61440	61440					0.11267337965318802
SKKARQRVF	9	Unmodified	_SKKARQRVF_					0	0	0			REV__nc|nan|Q5T0J3|C1orf220	REV__nc|nan|Q5T0J3|C1orf220	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3404541015625	2	560.340907	1118.66726	2.9009	0.0016255	-4.143	-0.0023215	-1.2421	-0.00069599	560.3384791854071	101.98	1.2376	102.3	101.86	103.1	0.32511					132	30	6	0	0	0	0.76255	1	12431	12431		35.618	5.3006	1	15824000	+		54227	30325	36166	36181	61441	61441					0.11267337965318802
SKKCASSD	8	Unmodified	_SKKCASSD_					0	0	0			REV__nc|nan|Q8N5N4-2|C3orf22	REV__nc|nan|Q8N5N4-2|C3orf22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.19415283203125	2	413.192185	824.369817	-0.18724	-7.7364E-05	4.0202	0.0016611	3.833	0.0015838	413.1937663511514	85.64	2.721	85.707	84.549	87.27	0.067261					129	62	3	0	0	0	0.8537	1	8580	8580		25.574	0.12388	1	1496400	+		54228	22411	36167	36182	61442	61442					-0.04939286693456779
SKKEGKVV	8	Unmodified	_SKKEGKVV_					0	0	0		ENSG00000241322|ENST00000395906|FBXW10B;nc|ENSG00000171931|Q5XX13-3|FBXW10;nc|ENSG00000171931|Q5XX13-4|FBXW10;ENSG00000171931|ENST00000395665|FBXW10;nc|ENSG00000171931|Q5XX13-2|FBXW10	ENSG00000241322|ENST00000395906|FBXW10B	ENSG00000241322|ENST00000395906|FBXW10B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77117919921875	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.8621	1	2191	2191		26.693	4.733	1	1041500			54229	6724	36168	36183	61443	61443					0.0865437527713766
SKKEGKVV	8	Unmodified	_SKKEGKVV_					0	0	0		ENSG00000241322|ENST00000395906|FBXW10B;nc|ENSG00000171931|Q5XX13-3|FBXW10;nc|ENSG00000171931|Q5XX13-4|FBXW10;ENSG00000171931|ENST00000395665|FBXW10;nc|ENSG00000171931|Q5XX13-2|FBXW10	ENSG00000241322|ENST00000395906|FBXW10B	ENSG00000241322|ENST00000395906|FBXW10B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7711486816406	2	437.77146	873.528367	-0.10723	-4.6943E-05	-0.31102	-0.00013615	-0.41825	-0.0001831	437.7713100510169	39.948	1.5972	39.9	38.972	40.569	-0.04789					99	48	4	0	0	0	0.7961	1	2514	2514		17.365	0.89182	1	3032300			54230	6724	36168	36183	61444	61444					0.0865437527713766
SKKEGKVV	8	Unmodified	_SKKEGKVV_					0	0	0		ENSG00000241322|ENST00000395906|FBXW10B;nc|ENSG00000171931|Q5XX13-3|FBXW10;nc|ENSG00000171931|Q5XX13-4|FBXW10;ENSG00000171931|ENST00000395665|FBXW10;nc|ENSG00000171931|Q5XX13-2|FBXW10	ENSG00000241322|ENST00000395906|FBXW10B	ENSG00000241322|ENST00000395906|FBXW10B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77142333984375	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.80706	1	2935	2935		19.36	3.7182	1	13476000			54231	6724	36168	36183	61445	61445					0.0865437527713766
SKKGLLST	8	Unmodified	_SKKGLLST_					0	0	0		nc|ENSG00000165521|Q05BV3|EML5;ENSG00000165521|ENST00000554922|EML5;ENST00000553281.5_1_14:89088194-89171927:-|nuORF;ENST00000553320.5_2_14:89087611-89093274:-|nuORF	nc|ENSG00000165521|Q05BV3|EML5	nc|ENSG00000165521|Q05BV3|EML5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.25836181640625	2	417.258185	832.501818	0.52563	0.00021932	-0.071237	-2.9724E-05	0.45439	0.0001896	417.2580621570988	22.515	2.686	21.904	21.633	24.319	-0.6107					140	63	3	0	0	0	0.8347	1	922	922		23.042	0	1	2260100			54232	6090	36169	36184	61446	61446					0.07886686385802477
SKKKKTKREQL	11	Unmodified	_SKKKKTKREQL_					0	0	0		ENST00000471405.5_1_7:135366313-135386730:-|nuORF;nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|18|107.56|0.71|7.23|-|ENST00000354042|SLC13A4,SLC13A4;chr7:135702881-135705596|15|47.53|0.26|7.51|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	ENST00000471405.5_1_7:135366313-135386730:-|nuORF	ENST00000471405.5_1_7:135366313-135386730:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.62384033203125	3	458.624421	1372.85143	-1.7497	-0.00080247	0.62458	0.00028645	-1.1252	-0.00051602	458.62457377783767	106.96	1.2018	107.02	106.65	107.85	0.053757					84	28	4	0	0	0	0.76892	1	11400	11400		17.833	1.3033	1	1632700			54233	12240	36170	36185	61447	61447					0.17992061605377785
SKKKSDKKAS	10	Unmodified	_SKKKSDKKAS_					0	0	0			REV__nc|ENSG00000182621|Q9NQ66-2|PLCB1	REV__nc|ENSG00000182621|Q9NQ66-2|PLCB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8306274414062	2	553.830037	1105.64552	0.84671	0.00046893	-0.11474	-6.3545E-05	0.73197	0.00040539	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.8651	1	10741	10741		25.574	0	1	5381700	+		54234	22537	36171	36186	61448	61448					0.09692488426071577
SKKLASSS	8	Unmodified	_SKKLASSS_					0	0	0		ENSG00000167077|ENST00000401548|MEI1	ENSG00000167077|ENST00000401548|MEI1	ENSG00000167077|ENST00000401548|MEI1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2323303222656	2	404.232168	806.449782	-1.2204	-0.00049332	3.4349	0.0013885	2.2146	0.00089519	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.90983	1	8012	8012		42.396	1.618	1	2752600			54235	6264	36172	36187	61449	61449					0.038815229720512434
SKKLASSS	8	Unmodified	_SKKLASSS_					0	0	0		ENSG00000167077|ENST00000401548|MEI1	ENSG00000167077|ENST00000401548|MEI1	ENSG00000167077|ENST00000401548|MEI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.23199462890625	2	404.232168	806.449782	-1.8204	-0.00073588	4.0064	0.0016195	2.1859	0.00088362	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.7961	1	8528	8528		17.365	1.7232	1	4754100			54236	6264	36172	36187	61450	61450					0.038815229720512434
SKKLLTAD	8	Unmodified	_SKKLLTAD_					0	0	0			REV__nc|ENSG00000139890|Q8IYK8-2|REM2	REV__nc|ENSG00000139890|Q8IYK8-2|REM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2626647949219	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.82658	1	3411	3411		21.96	0	1	4268300	+		54237	19579	36173	36188	61451	61451					0.07010669040221273
SKKLSTLG	8	Unmodified	_SKKLSTLG_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.25860595703125	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.79929	1	555	555		18.324	3.6603	1	867930	+		54238	23285	36174	36189	61452	61452					0.07886686385813846
SKKNIFWF	8	Unmodified	_SKKNIFWF_					0	0	0			REV__ENSG00000198887|ENST00000361138|SMC5	REV__ENSG00000198887|ENST00000361138|SMC5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.815185546875	2	535.295102	1068.57565	-0.074782	-4.003E-05	-0.72257	-0.00038679	-0.79735	-0.00042682	535.2948861557828	99.433	0.40474	99.483	99.233	99.638	0.04982					12	9	2	0	0	0	0.4196	1	10555	10555		19.36	0.25645	1	58158	+		54239	23404	36175	36190	61453	61453					0.0441065454810996
SKKPIRRLSD	10	Unmodified	_SKKPIRRLSD_					0	0	0			REV__nc|ENSG00000135540|Q5SYE7|NHSL1	REV__nc|ENSG00000135540|Q5SYE7|NHSL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5805358886719	3	400.578811	1198.7146	3.1807	0.0012741	1.1216	0.00044928	4.3022	0.0017234	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.85441	1	12562	12562		20.837	3.6704	1	88404	+		54240	29866	36176	36191	61454	61454					0.12319572445653648
SKKQLFLLLSF	11	Unmodified	_SKKQLFLLLSF_					0	0	0		ENST00000479857.1_1_6:47549752-47549854:+|nuORF	ENST00000479857.1_1_6:47549752-47549854:+|nuORF	ENST00000479857.1_1_6:47549752-47549854:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2731018066406	3	441.939346	1322.79621	0.63201	0.00027931	0.44307	0.00019581	1.0751	0.00047512	441.93938161315157	55.264	1.2271	55.292	54.682	55.909	0.027142					77	31	3	0	0	0	0.74771	1	5014	5014		22.562	4.0305	1	422510			54241	12421	36177	36192	61455	61455					0.1477225508488118
SKKQLFLLLSF	11	Unmodified	_SKKQLFLLLSF_					0	0	0		ENST00000479857.1_1_6:47549752-47549854:+|nuORF	ENST00000479857.1_1_6:47549752-47549854:+|nuORF	ENST00000479857.1_1_6:47549752-47549854:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.93975830078125	3	441.939346	1322.79621	0.44003	0.00019447	0.50857	0.00022475	0.9486	0.00041922	441.9393914889037	56.404	2.26	56.437	55.731	57.991	0.033184					145	81	3	0	0	0	0.72374	2	5059	5022;5059		27.644	7.6134	1	750870			54242	12421	36177	36192	61456;61457	61457					0.1477225508488118
SKKQPSHK	8	Unmodified	_SKKQPSHK_					0	0	0			REV__ENSG00000055609|ENST00000262189|KMT2C	REV__ENSG00000055609|ENST00000262189|KMT2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.2721862792969	2	470.272158	938.529764	-0.1113	-5.2342E-05	0.10562	4.9668E-05	-0.0056854	-2.6737E-06	470.27219532048343	92.361	2.6069	92.431	91.273	93.88	0.06987					140	61	4	0	0	0	0.84341	1	9539	9539		24.203	2.2429	1	1898400	+		54243	16413	36178	36193	61458	61458					0.058040093658974
SKKRKIFA	8	Unmodified	_SKKRKIFA_					0	0	0			REV__ENSG00000166004|ENST00000325212|CEP295	REV__ENSG00000166004|ENST00000325212|CEP295	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.3135986328125	2	489.316369	976.618185	-1.0416	-0.00050969	-3.7416	-0.0018308	-4.7832	-0.0023405	489.31444436731414	95.161	1.948	95.208	94.748	96.696	0.046989					116	45	4	0	0	0	0.85277	1	10057	10057		25.45	0	1	1311400	+		54244	21241	36179	36194	61459	61459					0.12894049676367558
SKKRLFRKFPK	11	Unmodified	_SKKRLFRKFPK_					0	0	0			REV__ENSG00000112562|ENST00000356284|SMOC2	REV__ENSG00000112562|ENST00000356284|SMOC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2774963378906	3	478.973384	1433.89832	-0.099066	-4.745E-05	2.2144	0.0010607	2.1154	0.0010132	478.9750181964375	82.838	0.29515	82.904	82.787	83.082	0.06591					10	6	2	0	0	0	0.18209	1	8221	8221		2.389	0	1	35713	+		54245	17953	36180	36195	61460	61460					0.19872965947115517
SKKRLKKQSD	10	Unmodified	_SKKRLKKQSD_					0	0	0			REV__nc|ENSG00000188931|Q5VTH2|CFAP126	REV__nc|ENSG00000188931|Q5VTH2|CFAP126	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.9180908203125	3	406.582333	1216.72517	0.73411	0.00029848	3.5676	0.0014505	4.3017	0.001749	406.5836914632484	112.22	0.2012	112.29	112.11	112.31	0.066025					13	6	3	0	0	0	0.8492	1	12082	12082		18.531	0.69791	1	189340	+		54246	30117	36181	36196	61461	61461					0.1254755510008181
SKKRLYVRLHK	11	Unmodified	_SKKRLYVRLHK_					0	0	0			REV__ENSG00000173258|ENST00000309235|ZNF483	REV__ENSG00000173258|ENST00000309235|ZNF483	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6240234375	3	476.636772	1426.88849	2.8112	0.0013399	1.7223	0.00082089	4.5334	0.0021608	476.63780667982405	107.89	0.15334	107.86	107.73	107.88	-0.031487					5	3	2	0	0	0	0.181	1	11973	11973		7.3413	0	1	875110	+		54247	21908	36182	36197	61462	61462					0.19211777941745822
SKKRRHKSD	9	Unmodified	_SKKRRHKSD_					0	0	0		nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	571.3313598632812	2	571.33107	1140.64759	0.55864	0.00031917	-0.76258	-0.00043569	-0.20394	-0.00011652	571.3306168800059	102.04	2.573	102.24	101.51	104.08	0.19484					133	63	4	0	0	0	0.78983	1	10772	10772		27.882	2.3082	1	4021100			54248	8065	36183	36198	61463	61463					0.0828896195453126
SKKRTLKENL	10	Unmodified	_SKKRTLKENL_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2476501464844	3	406.250583	1215.72992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.82	1	115.75	115.25	116.25	-0.069672								0	0	0	0.45132	1	12425	12425		24.232	2.4514	1				54249	2794	36184	36199	61464	61464					0.13068439242874774
SKKRYQDLLMR	11	Unmodified	_SKKRYQDLLMR_					0	0	0			REV__ENSG00000112893|ENST00000261483|MAN2A1	REV__ENSG00000112893|ENST00000261483|MAN2A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.3273620605469	3	479.938011	1436.7922	0.061865	2.9691E-05	2.9315	0.0014069	2.9933	0.0014366	479.9394719366347	15.783	0.22918	15.841	15.736	15.965	0.057872					12	6	3	0	0	0	0.18034	1	67	67		16.53	0	1	94500	+		54250	17970	36185	36200	61465	61465					0.09127842319503543
SKKSAIKKGE	10	Unmodified	_SKKSAIKKGE_					0	0	0			REV__ENST00000302472.3_1_5:40680251-40680356:+|nuORF	REV__ENST00000302472.3_1_5:40680251-40680356:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3270874023438	2	538.327131	1074.63971	0.070633	3.8024E-05	-0.68681	-0.00036973	-0.61617	-0.0003317	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.86348	1	10819	10819		31.53	3.6476	1	109840000	+		54251	24785	36186	36201	61466	61466					0.10537389914406958
SKKSASLS	8	Unmodified	_SKKSASLS_					0	0	0		ENST00000543741.6_1_14:24436525-24436753:+|nuORF	ENST00000543741.6_1_14:24436525-24436753:+|nuORF	ENST00000543741.6_1_14:24436525-24436753:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.23236083984375	2	404.232168	806.449782	2.8761	0.0011626	-0.84201	-0.00034037	2.0341	0.00082225	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.84341	1	8534	8534		24.203	1.1603	1	4761400			54252	13560	36187	36202	61467	61467					0.03881522972039875
SKKSSTLQQLI	11	Unmodified	_SKKSSTLQQLI_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	nc|ENSG00000198626|Q92736-2|RYR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.5779113769531	3	411.578477	1231.7136	2.5627	0.0010547	-3.0273	-0.001246	-0.46468	-0.00019125	411.57697200655724	102.98	0.6842	103.21	103.04	103.72	0.22556					21	18	2	0	0	0	0.75457	1	12527	12527		21.032	0.19508	1	678990			54253	8298	36188	36203	61468	61468					0.10701313286108416
SKKSVKTP	8	Unmodified	_SKKSVKTP_					0	0	0		ENSG00000124610|ENST00000244573|H1-1	ENSG00000124610|ENST00000244573|H1-1	ENSG00000124610|ENST00000244573|H1-1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7713623046875	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.80706	1	2983	2983		19.36	1.0356	1	9763800			54254	3350	36189	36204	61469	61469					0.08654375277126292
SKKSVKTP	8	Unmodified	_SKKSVKTP_					0	0	0		ENSG00000124610|ENST00000244573|H1-1	ENSG00000124610|ENST00000244573|H1-1	ENSG00000124610|ENST00000244573|H1-1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713928222656	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.87922	1	2923	2923		31.955	5.1588	1	13476000			54255	3350	36189	36204	61470	61470					0.08654375277126292
SKKSVKTP	8	Unmodified	_SKKSVKTP_					0	0	0		ENSG00000124610|ENST00000244573|H1-1	ENSG00000124610|ENST00000244573|H1-1	ENSG00000124610|ENST00000244573|H1-1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7716064453125	2	437.77146	873.528367	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.087	1	36.527	36.027	37.027	0.44043								0	0	0	0.2939	1	2828	2828		27.882	3.6795	1				54256	3350	36189	36204	61471	61471					0.08654375277126292
SKKTAIVS	8	Unmodified	_SKKTAIVS_					0	0	0			REV__ENSG00000154928|ENST00000398015|EPHB1	REV__ENSG00000154928|ENST00000398015|EPHB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.25830078125	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.84341	1	536	536		24.203	1.1603	1	867930	+		54257	20409	36190	36205	61472	61472					0.07886686385813846
SKKTAIVS	8	Unmodified	_SKKTAIVS_					0	0	0			REV__ENSG00000154928|ENST00000398015|EPHB1	REV__ENSG00000154928|ENST00000398015|EPHB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2581787109375	2	417.258185	832.501818	0.52563	0.00021932	-0.071237	-2.9724E-05	0.45439	0.0001896	417.2580621570988	22.515	2.686	21.904	21.633	24.319	-0.6107					140	63	3	0	0	0	0.83058	1	1006	1006		12.959	0	1	2260100	+		54258	20409	36190	36205	61473	61473					0.07886686385813846
SKKTKKSH	8	Unmodified	_SKKTKKSH_					0	0	0		ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2876281738281	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.81897	1	10386	10386		20.947	0.4651	1	50843000			54259	4717	36191	36206	61474	61474					0.0874858239999412
SKKTKKSH	8	Unmodified	_SKKTKKSH_					0	0	0		ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2877197265625	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.86677	1	10017	10017		27.882	2.4321	1	40161000			54260	4717	36191	36206	61475	61475					0.0874858239999412
SKKTKKSH	8	Unmodified	_SKKTKKSH_					0	0	0		ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28631591796875	2	472.287808	942.561064	-1.7052	-0.00080535	2.3948	0.001131	0.68962	0.0003257	472.28898055731867	100.86	0.81633	101.01	100.62	101.44	0.15863					35	19	2	0	0	0	0.87479	1	10510	10510		30.504	1.3541	1	239800			54261	4717	36191	36206	61476	61476					0.0874858239999412
SKKTKKSH	8	Unmodified	_SKKTKKSH_					0	0	0		ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	ENSG00000144554|ENST00000675286|FANCD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2881774902344	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.8347	1	12720	12720		23.042	0	1	3080300			54262	4717	36191	36206	61477	61477					0.0874858239999412
SKKVASTL	8	Unmodified	_SKKVASTL_					0	0	0		ENST00000542519.1_1_12:6782380-6787618:-|nuORF;nc|ENSG00000126746|Q8TF68-3|ZNF384;nc|ENSG00000126746|Q8TF68-2|ZNF384;nc|ENSG00000126746|Q8TF68|ZNF384;ENSG00000126746|ENST00000683879|ZNF384	ENST00000542519.1_1_12:6782380-6787618:-|nuORF	ENST00000542519.1_1_12:6782380-6787618:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.25830078125	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.81567	1	950	950		14.865	1.9057	1	1763000			54263	3462	36192	36207	61478	61478					0.07886686385802477
SKKVLATS	8	Unmodified	_SKKVLATS_					0	0	0			REV__nc|ENSG00000169129|Q8N4X5-2|AFAP1L2	REV__nc|ENSG00000169129|Q8N4X5-2|AFAP1L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.25823974609375	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.82658	1	962	962		21.96	5.4867	1	1763000	+		54264	21553	36193	36208	61479	61479					0.07886686385802477
SKKVPEQQA	9	Unmodified	_SKKVPEQQA_					0	0	0			REV__nc|ENSG00000003402|O15519-12|CFLAR	REV__nc|ENSG00000003402|O15519-12|CFLAR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.7847595214844	2	507.782556	1013.55056	0.51213	0.00026005	3.9471	0.0020043	4.4593	0.0022643	507.78450159638214	16.833	0.70228	16.345	16.098	16.8	-0.48718					32	15	4	0	0	0	0.44421	1	183	183		54.776	5.2403	1	834700	+		54265	16052	36194	36209	61480	61480					0.044325549548943854
SKKVTHTR	8	Unmodified	_SKKVTHTR_					0	0	0			REV__ENSG00000198040|ENST00000539354|ZNF84	REV__ENSG00000198040|ENST00000539354|ZNF84	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.78533935546875	2	478.785433	955.556313	0.70537	0.00033772	0.63532	0.00030418	1.3407	0.0006419	478.78492064616836	92.181	2.2722	92.339	91.473	93.745	0.15829					125	53	4	0	0	0	0.89679	1	9341	9341		37.812	12.361	1	756310	+		54266	23290	36195	36210	61481	61481					0.0767569825721921
SKKVTSSA	8	Unmodified	_SKKVTSSA_					0	0	0		ENST00000430538.1_1_21:31635868-31636186:-|nuORF	ENST00000430538.1_1_21:31635868-31636186:-|nuORF	ENST00000430538.1_1_21:31635868-31636186:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2322692871094	2	404.232168	806.449782	-0.18723	-7.5686E-05	2.2381	0.00090472	2.0509	0.00082904	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.89043	1	8465	8465		35.618	5.1146	1	4185000			54267	11636	36196	36211	61482	61482					0.038815229720512434
SKKVTSSA	8	Unmodified	_SKKVTSSA_					0	0	0		ENST00000430538.1_1_21:31635868-31636186:-|nuORF	ENST00000430538.1_1_21:31635868-31636186:-|nuORF	ENST00000430538.1_1_21:31635868-31636186:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.2312316894531	2	404.232168	806.449782	0.76489	0.0003092	1.2437	0.00050276	2.0086	0.00081195	404.2325671203917	85.114	3.6255	85.042	83.452	87.078	-0.07196					165	83	2	0	0	0	0.86677	1	8660	8660		27.882	3.6795	1	4970800			54268	11636	36196	36211	61483	61483					0.038815229720512434
SKKVTSSA	8	Unmodified	_SKKVTSSA_					0	0	0		ENST00000430538.1_1_21:31635868-31636186:-|nuORF	ENST00000430538.1_1_21:31635868-31636186:-|nuORF	ENST00000430538.1_1_21:31635868-31636186:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.23223876953125	2	404.232168	806.449782	2.8761	0.0011626	-0.84201	-0.00034037	2.0341	0.00082225	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.86677	1	8523	8523		27.882	5.9224	1	4761400			54269	11636	36196	36211	61484	61484					0.038815229720512434
SKLAVASFLGE	11	Unmodified	_SKLAVASFLGE_					0	0	0		ENST00000579048.4_1_17:73617188-73617694:+|nuORF	ENST00000579048.4_1_17:73617188-73617694:+|nuORF	ENST00000579048.4_1_17:73617188-73617694:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	561.309326171875	2	561.313689	1120.61282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.151	1	69.28	68.78	69.78	0.12865								0	0	0	0.56276	1	6250	6250		29.17	1.2878	1				54270	14082	36197	36212	61485	61485					0.05734281303239186
SKLDGVVLKP	10	Unmodified	_SKLDGVVLKP_					0	0	0		nc|ENSG00000180113|O60522-2|TDRD6;ENSG00000180113|ENST00000316081|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.328369140625	2	528.326599	1054.63865	-1.5179	-0.00080196	3.9397	0.0020815	2.4218	0.0012795	528.328271416259	37.858	1.164	37.858	37.395	38.559	0					41	28	2	0	0	0	0.85981	1	2284	2284		35.152	2.3396	1	386700			54271	7314	36198	36213	61486	61486					0.11351175545519254
SKLETPLDLAA	11	Unmodified	_SKLETPLDLAA_					0	0	0		ENSG00000185046|ENST00000683438|ANKS1B;nc|ENSG00000185046|Q7Z6G8|ANKS1B	ENSG00000185046|ENST00000683438|ANKS1B	ENSG00000185046|ENST00000683438|ANKS1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	579.3226928710938	2	579.324254	1156.63395	-0.41719	-0.00024169	-1.6446	-0.00095276	-2.0618	-0.0011944	579.3231858120126	16.453	0.36677	15.855	15.74	16.107	-0.59873					15	7	3	0	0	0	0.69248	1	142	142		32.751	1.1163	1	477950			54272	7673	36199	36214	61487	61487					0.06190246612095507
SKLFPKIPPH	10	Unmodified	_SKLFPKIPPH_					0	0	0		ENSG00000241973|ENST00000255882|PI4KA;ENST00000485963.5_1_22:21152870-21213097:-|nuORF	ENSG00000241973|ENST00000255882|PI4KA	ENSG00000241973|ENST00000255882|PI4KA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3530883789062	2	582.350409	1162.68626	3.1803	0.0018521	1.9439	0.001132	5.1242	0.0029841	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.86348	1	11584	11584		31.53	2.3598	1	77008000			54273	8798	36200	36215	61488	61488					0.1114287453635825
SKLIRKKD	8	Unmodified	_SKLIRKKD_					0	0	0			REV__L1MA4A_dup2646|chr7:55461716-55462655:-|1.3508968680904496|0.4304615177296836|1.65|63.0|18|2|sense	REV__L1MA4A_dup2646|chr7:55461716-55462655:-|1.3508968680904496|0.4304615177296836|1.65|63.0|18|2|sense	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.31585693359375	2	494.319109	986.623664	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.085	1	44.058	43.558	44.558	-0.026764								0	0	0	0.30673	1	3399	3399		15.642	0.77694	1		+		54274	29487	36201	36216	61489	61489					0.12981728468173515
SKLKILHWKD	10	Unmodified	_SKLKILHWKD_					0	0	0			REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.286904904037577|0.1763547852274372|2.87|63.0|40|2|sense	REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.286904904037577|0.1763547852274372|2.87|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.376953125	2	634.379697	1266.74484	-0.13802	-8.7559E-05	-3.8404	-0.0024363	-3.9784	-0.0025238	634.3770517234923	117.28	0.25537	117.21	117	117.26	-0.07531					24	8	3	0	0	0	0.86763	1	12564	12564		26.693	1.2427	1	1742800	+		54275	29582	36202	36217	61490	61490					0.12213931110841258
SKLKILHWKD	10	Unmodified	_SKLKILHWKD_					0	0	0			REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.286904904037577|0.1763547852274372|2.87|63.0|40|2|sense	REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.286904904037577|0.1763547852274372|2.87|63.0|40|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3746948242188	2	634.379697	1266.74484	-1.1774	-0.00074694	-2.4387	-0.001547	-3.6161	-0.002294	634.3776223317757	111.13	0.41051	111.12	110.9	111.31	-0.0074387					40	17	3	0	0	0	0.86587	1	11838	11838		29.17	10.846	1	240410	+		54276	29582	36202	36217	61491	61491					0.12213931110841258
SKLLESERKL	10	Unmodified	_SKLLESERKL_					0	0	0		ENSG00000244607|ENST00000310232|CCDC13	ENSG00000244607|ENST00000310232|CCDC13	ENSG00000244607|ENST00000310232|CCDC13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.85791015625	2	601.858795	1201.70304	-0.24099	-0.00014504	-1.5802	-0.00095104	-1.8212	-0.0010961	601.8577844533773	103.4	2.3202	103.45	103.07	105.39	0.041481					122	55	4	0	0	0	0.8651	1	11216	11216		25.574	2.0514	1	1412200			54277	8824	36203	36218	61492	61492					0.11025330631650831
SKLLKASRE	9	Unmodified	_SKLLKASRE_					0	0	0		nc|ENSG00000048828|Q9NZB2-4|FAM120A;ENSG00000048828|ENST00000277165|FAM120A;nc|ENSG00000048828|Q9NZB2-6|FAM120A	nc|ENSG00000048828|Q9NZB2-4|FAM120A	nc|ENSG00000048828|Q9NZB2-4|FAM120A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.31005859375	2	516.314023	1030.61349	-0.63194	-0.00032628	1.5468	0.00079865	0.9149	0.00047237	516.3149967454959	103.62	1.1732	103.62	103.18	104.36	0					52	28	2	0	0	0	0.7932	1	10703	10703		26.693	1.1189	1	411250			54278	979	36204	36219	61493	61493					0.09941120742928433
SKLLKCRIQAS	11	Unmodified	_SKLLKCRIQAS_					0	0	0			REV__ENSG00000162989|ENST00000295101|KCNJ3	REV__ENSG00000162989|ENST00000295101|KCNJ3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	623.8712158203125	2	623.86864	1245.72273	-0.25925	-0.00016174	3.0799	0.0019214	2.8206	0.0017597	623.8704556455313	104.73	1.8693	104.71	104.28	106.15	-0.014809					121	44	4	0	0	0	0.75164	1	11352	11352		21.686	3.4237	1	1315900	+		54279	20869	36205	36220	61494	61494					0.10969383370775176
SKLLKCRIQAS	11	Unmodified	_SKLLKCRIQAS_					0	0	0			REV__ENSG00000162989|ENST00000295101|KCNJ3	REV__ENSG00000162989|ENST00000295101|KCNJ3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.871826171875	2	623.86864	1245.72273	0.9237	0.00057627	1.845	0.001151	2.7687	0.0017273	623.8696844669474	104.46	2.0179	104.58	104.11	106.13	0.11684					143	50	4	0	0	0	0.72106	1	11132	11132		28.081	5.5018	1	2763900	+		54280	20869	36205	36220	61495	61495					0.10969383370775176
SKLLKCRIQAS	11	Unmodified	_SKLLKCRIQAS_					0	0	0			REV__ENSG00000162989|ENST00000295101|KCNJ3	REV__ENSG00000162989|ENST00000295101|KCNJ3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	623.871337890625	2	623.86864	1245.72273	-1.2116	-0.00075585	4.0024	0.002497	2.7909	0.0017411	623.8710403744353	104.48	2.0404	104.58	104.1	106.14	0.093857					153	50	5	0	0	0	0.75164	1	11044	11044		21.686	6.0439	1	2931600	+		54281	20869	36205	36220	61496	61496					0.10969383370775176
SKLLSLNTDKT	11	Unmodified	_SKLLSLNTDKT_					0	0	0		ENSG00000165813|ENST00000369287|CCDC186	ENSG00000165813|ENST00000369287|CCDC186	ENSG00000165813|ENST00000369287|CCDC186	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.7417297363281	3	407.234599	1218.68197	1.5127	0.00061603	-0.057532	-2.3429E-05	1.4552	0.0005926	407.2344875504619	24.36	0.53418	23.978	23.707	24.241	-0.38178					19	11	2	0	0	0	0.17273	1	1132	1132		22.781	17.639	1	75724			54282	6128	36206	36221	61497	61497					0.08137320532114245
SKLLSVLKEF	10	Unmodified	_SKLLSVLKEF_					0	0	0			REV__ENSG00000198908|ENST00000457056|GPRASP3	REV__ENSG00000198908|ENST00000457056|GPRASP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.35400390625	2	582.355357	1162.69616	-0.84093	-0.00048972	-2.4295	-0.0014149	-3.2705	-0.0019046	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.86348	1	11628	11628		31.53	3.6476	1	77752000	+		54283	23409	36207	36222	61498	61498					0.1213201775105972
SKLLSVLKEF	10	Unmodified	_SKLLSVLKEF_					0	0	0			REV__ENSG00000198908|ENST00000457056|GPRASP3	REV__ENSG00000198908|ENST00000457056|GPRASP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3534545898438	2	582.355357	1162.69616	0.88325	0.00051437	-4.1095	-0.0023932	-3.2263	-0.0018788	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.84816	2	11402	11221;11402		33.922	6.0394	1	125340000	+		54284	23409	36207	36222	61499;61500	61500					0.1213201775105972
SKLMAISKP	9	Unmodified	_SKLMAISKP_					0	0	0		ENSG00000149054|ENST00000278319|ZNF215;nc|ENSG00000149054|Q9UL58-2|ZNF215	ENSG00000149054|ENST00000278319|ZNF215	ENSG00000149054|ENST00000278319|ZNF215	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.790771484375	2	487.788795	973.563038	-0.085708	-4.1808E-05	3.6076	0.0017597	3.5219	0.0017179	487.79055713195385	82.247	2.9075	82.313	80.559	83.466	0.065918					149	67	3	0	0	0	0.7932	1	8083	8083		25.574	3.6142	1	514950			54285	4994	36208	36223	61501	61501					0.07519875093578321
SKLNMGIAKLF	11	Unmodified	_SKLNMGIAKLF_					0	0	0			REV__ENST00000560392.5_1_15:80365641-80390798:+|nuORF	REV__ENST00000560392.5_1_15:80365641-80390798:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3545532226562	2	611.354834	1220.69511	0.21559	0.0001318	1.6628	0.0010166	1.8784	0.0011484	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.7144	1	9763	9763		29.17	2.4771	1	5379900	+		54286	28761	36209	36224	61502	61502					0.09359480110538243
SKLPKRGAS	9	Unmodified	_SKLPKRGAS_					0	0	0			REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.28814697265625	2	472.287808	942.561064	-0.91361	-0.00043149	1.3293	0.00062781	0.41567	0.00019632	472.2883987984471	99.414	1.6316	99.414	99.097	100.73	0					84	38	3	0	0	0	0.7932	1	10062	10062		25.574	2.5316	1	360760	+		54287	18122	36210	36225	61503	61503					0.0874858239999412
SKLPKRGAS	9	Unmodified	_SKLPKRGAS_					0	0	0			REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2876281738281	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.77696	1	10108	10108		31.53	1.0262	1	48696000	+		54288	18122	36210	36225	61504	61504					0.0874858239999412
SKLPKRGAS	9	Unmodified	_SKLPKRGAS_					0	0	0			REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.28753662109375	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.76764	1	11570	11570		34.173	5.023	1	24731000	+		54289	18122	36210	36225	61505	61505					0.0874858239999412
SKLRELGRRD	10	Unmodified	_SKLRELGRRD_					0	0	0		nc|ENSG00000196730|P53355-4|DAPK1;ENSG00000196730|ENST00000408954|DAPK1;nc|ENSG00000196730|P53355-3|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	615.357177734375	2	615.357285	1228.70002	3.0577	0.0018815	-2.8693	-0.0017657	0.18832	0.00011588	615.3555264925384	104.67	2.1648	104.63	104.19	106.35	-0.04039					150	51	4	0	0	0	0.86763	1	11507	11507		26.693	2.1737	1	2045600			54290	8097	36211	36226	61506	61506					0.0948150029748831
SKLRKLEAS	9	Unmodified	_SKLRKLEAS_					0	0	0		nc|ENSG00000105298|Q8WUQ7-2|CACTIN;ENSG00000105298|ENST00000429344|CACTIN	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3137817382812	2	516.314023	1030.61349	0.876	0.00045229	-1.3141	-0.00067851	-0.43813	-0.00022621	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.77696	2	10648	10648;10792		31.53	1.1189	1	67025000			54291	14829	36212	36227	61507;61508	61507					0.09941120742928433
SKLRKLEAS	9	Unmodified	_SKLRKLEAS_					0	0	0		nc|ENSG00000105298|Q8WUQ7-2|CACTIN;ENSG00000105298|ENST00000429344|CACTIN	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3145751953125	2	516.314023	1030.61349	-0.25799	-0.00013321	-0.28251	-0.00014586	-0.5405	-0.00027907	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.77696	1	10453	10453		31.53	2.3598	1	82226000			54292	14829	36212	36227	61509	61509					0.09941120742928433
SKLRKLEAS	9	Unmodified	_SKLRKLEAS_					0	0	0		nc|ENSG00000105298|Q8WUQ7-2|CACTIN;ENSG00000105298|ENST00000429344|CACTIN	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3145141601562	2	516.314023	1030.61349	0.80555	0.00041592	-1.2336	-0.00063695	-0.42809	-0.00022103	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.64555	3	10447	10435;10447;10532		44.377	10.456	1	72906000			54293	14829	36212	36227	61510;61511;61512	61511					0.09941120742928433
SKLRKLEAS	9	Unmodified	_SKLRKLEAS_					0	0	0		nc|ENSG00000105298|Q8WUQ7-2|CACTIN;ENSG00000105298|ENST00000429344|CACTIN	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3139038085938	2	516.314023	1030.61349	-1.5618	-0.0008064	1.1232	0.00057995	-0.4386	-0.00022645	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.77696	5	10273	10273;10297;10368;10440;10503		31.53	4.8369	1	66055000			54294	14829	36212	36227	61513;61514;61515;61516;61517	61513					0.09941120742928433
SKLRKLEAS	9	Unmodified	_SKLRKLEAS_					0	0	0		nc|ENSG00000105298|Q8WUQ7-2|CACTIN;ENSG00000105298|ENST00000429344|CACTIN	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	nc|ENSG00000105298|Q8WUQ7-2|CACTIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3138427734375	2	516.314023	1030.61349	1.791	0.00092474	-1.8271	-0.00094338	-0.036105	-1.8641E-05	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.77696	2	11976	11976;12049		31.53	1.5971	1	24820000			54295	14829	36212	36227	61518;61519	61518					0.09941120742928433
SKLRLIMLTY	10	Unmodified	_SKLRLIMLTY_					0	0	0			REV__nc|ENSG00000082556|P41145-2|OPRK1	REV__nc|ENSG00000082556|P41145-2|OPRK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3732299804688	2	619.370484	1236.72641	3.0782	0.0019065	-1.2801	-0.00079283	1.7981	0.0011137	619.8710459081657	101.29	0.9677	101.61	101.32	102.29	0.32511					61	26	3	0	0	0	0.8651	1	12318	12318		25.574	0	1	2930100	+		54296	16842	36213	36228	61520	61520					0.1175205314464165
SKLRLKEAPNI	11	Unmodified	_SKLRLKEAPNI_					0	0	0		ENSG00000135414|ENST00000257868|GDF11	ENSG00000135414|ENST00000257868|GDF11	ENSG00000135414|ENST00000257868|GDF11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.893310546875	2	634.887887	1267.76122	2.7957	0.0017749	4.3447	0.0027584	7.1403	0.0045333	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.65746	1	11843	11843		37.812	4.9991	1	42597000			54297	4016	36214	36229	61521	61521					0.13805012276975503
SKLRLRRRNN	10	Unmodified	_SKLRLRRRNN_					0	0	0			REV__ENSG00000163689|ENST00000482387|CFAP20DC	REV__ENSG00000163689|ENST00000482387|CFAP20DC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2729797363281	3	438.272604	1311.79598	-0.96199	-0.00042161	1.777	0.00077881	0.81502	0.0003572	438.2732841967114	107.57	0.99143	107.57	106.84	107.83	0					91	23	5	0	0	0	0.86014	1	11162	11162		23.378	1.5975	1	3871200	+		54298	20958	36215	36230	61522	61522					0.1525569292828095
SKLRLRRRNN	10	Unmodified	_SKLRLRRRNN_					0	0	0			REV__ENSG00000163689|ENST00000482387|CFAP20DC	REV__ENSG00000163689|ENST00000482387|CFAP20DC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.27313232421875	3	438.272604	1311.79598	-0.15875	-6.9576E-05	0.94099	0.00041241	0.78224	0.00034283	438.27291084215926	107.41	0.8759	107.38	106.95	107.82	-0.034409					90	20	5	0	0	0	0.86014	1	11740	11740		23.378	0.81632	1	4015900	+		54299	20958	36215	36230	61523	61523					0.1525569292828095
SKLSAAARLHR	11	Unmodified	_SKLSAAARLHR_					0	0	0			REV__nc|ENSG00000139977|Q147X3-2|NAA30	REV__nc|ENSG00000139977|Q147X3-2|NAA30	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9104919433594	3	403.910672	1208.71019	-0.34293	-0.00013851	-0.86883	-0.00035093	-1.2118	-0.00048945	403.9102188126006	68.233	2.7499	68.781	67.193	69.943	0.54819					138	70	3	0	0	0	0.73647	1	7542	7542		25.068	0.83596	1	253300	+		54300	19587	36216	36231	61524	61524					0.11418108022712659
SKLSKLLNNVT	11	Unmodified	_SKLSKLLNNVT_					0	0	0			REV__ENSG00000008869|ENST00000233099|HEATR5B	REV__ENSG00000008869|ENST00000233099|HEATR5B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2488098144531	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.03	1	116.06	115.56	116.56	0.026466								0	0	0	0.56276	1	12741	12741		21.032	3.1991	1		+		54301	16144	36217	36232	61525	61525					0.1194561714869451
SKLSKVAT	8	Unmodified	_SKLSKVAT_					0	0	0			REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2583312988281	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.82136	1	982	982		14.137	1.1779	1	1763000	+		54302	21226	36218	36233	61526	61526					0.07886686385802477
SKLSKVAT	8	Unmodified	_SKLSKVAT_					0	0	0			REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.2582702636719	2	417.258185	832.501818	0.52563	0.00021932	-0.071237	-2.9724E-05	0.45439	0.0001896	417.2580621570988	22.515	2.686	21.904	21.633	24.319	-0.6107					140	63	3	0	0	0	0.80308	1	968	968		16.473	2.6978	1	2260100	+		54303	21226	36218	36233	61527	61527					0.07886686385802477
SKLSLPRSN	9	Unmodified	_SKLSLPRSN_					0	0	0			REV__ENSG00000145975|ENST00000274673|FAM217A	REV__ENSG00000145975|ENST00000274673|FAM217A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2900085449219	2	501.290548	1000.56654	-1.4828	-0.00074334	1.1379	0.00057041	-0.34496	-0.00017293	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.78528	1	8087	8087		29.17	4.9673	1	2793500	+		54304	19979	36219	36234	61528	61528					0.06628261191792717
SKLSSKSA	8	Unmodified	_SKLSSKSA_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.232666015625	2	404.232168	806.449782	-1.2204	-0.00049332	3.4349	0.0013885	2.2146	0.00089519	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.8537	2	8039	8039;8074		30.318	0	1	2752600			54305	313;4699;8110;311	36220	36235	61529;61530	61529					0.038815229720512434
SKLSSKSA	8	Unmodified	_SKLSSKSA_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.2327880859375	2	404.232168	806.449782	0.76489	0.0003092	1.2437	0.00050276	2.0086	0.00081195	404.2325671203917	85.114	3.6255	85.042	83.452	87.078	-0.07196					165	83	2	0	0	0	0.89043	2	8753	8728;8753		37.812	0	1	4970800			54306	313;4699;8110;311	36220	36235	61531;61532	61532					0.038815229720512434
SKLSSKSA	8	Unmodified	_SKLSSKSA_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2328796386719	2	404.232168	806.449782	2.8761	0.0011626	-0.84201	-0.00034037	2.0341	0.00082225	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.8537	2	8579	8579;8616		37.812	0	1	4761400			54307	313;4699;8110;311	36220	36235	61533;61534	61533					0.038815229720512434
SKLSSKSA	8	Unmodified	_SKLSSKSA_					0	0	0		chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;chr2:165163893-165164392|23|20.7|0.14|7.17|-|ENST00000640652|SCN3A,SCN3A;chr2:165162828-165163802|30|18.27|0.14|7.01|-|ENST00000640652|SCN3A,SCN3A;chr2:165139608-165140798|27|15.19|0.27|5.82|-|ENST00000440431|SCN3A,SCN3A;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	chr2:165139608-165140789|34|14.0|0.29|5.57|-|ENST00000668657|SCN3A,SCN3A;nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000144285|P35498-3|SCN1A;nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.23248291015625	2	404.232168	806.449782	-1.8204	-0.00073588	4.0064	0.0016195	2.1859	0.00088362	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.8537	3	8239	8239;8261;8308		32.812	0	1	4754100			54308	313;4699;8110;311	36220	36235	61535;61536;61537	61535					0.038815229720512434
SKLTNISA	8	Unmodified	_SKLTNISA_					0	0	0			REV__nc|ENSG00000137634|Q6UWF7-2|NXPE4	REV__nc|ENSG00000137634|Q6UWF7-2|NXPE4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2395324707031	2	417.239993	832.465432	1.1488	0.00047933	-3.1805	-0.001327	-2.0317	-0.00084772	417.2384906610176	88.485	2.0585	88.411	87.855	89.913	-0.074005					110	48	3	0	0	0	0.86677	1	9198	9198		27.882	0	1	1559000	+		54309	19396	36221	36236	61538	61538					0.042498094890902394
SKLTVTILL	9	Unmodified	_SKLTVTILL_					0	0	0			REV__ENST00000513986.1_1_5:124082224-124082302:-|nuORF	REV__ENST00000513986.1_1_5:124082224-124082302:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.30084228515625	2	494.326068	986.637583	2.2948	0.0011344	-4.4254	-0.0021876	-2.1305	-0.0010532	494.32367481086396	97.429	0.62733	97.373	97.145	97.772	-0.055542					28	14	4	0	0	0	0.20789	1	10522	10522		27.882	13.017	1	326550	+		54310	28002	36222	36237	61539	61539					0.14372961176616172
SKLVSAARMF	10	Unmodified	_SKLVSAARMF_					0	0	0			REV__nc|ENSG00000107447|P04053-2|DNTT	REV__nc|ENSG00000107447|P04053-2|DNTT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.310791015625	2	555.310426	1108.6063	-0.67024	-0.00037219	2.4317	0.0013504	1.7615	0.00097816	555.312337360713	60.004	1.246	60.557	60.079	61.325	0.55323					38	33	2	0	0	0	0.70553	1	6357	6357		44.377	14.536	1	819920	+		54311	17658	36223	36238	61540	61540					0.05634064870855582
SKMKLLGP	8	Unmodified	_SKMKLLGP_					0	0	0			REV__ENST00000376911.1_1_9:75773422-75773617:+|nuORF	REV__ENST00000376911.1_1_9:75773422-75773617:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2656555175781	2	437.264956	872.515359	-2.1128	-0.00092385	3.801	0.001662	1.6882	0.00073819	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.90465	1	784	784		40.573	7.057	1	1366900	+		54312	24341	36224	36239	61541	61541					0.07400220893396181
SKMKLLGP	8	Unmodified	_SKMKLLGP_					0	0	0			REV__ENST00000376911.1_1_9:75773422-75773617:+|nuORF	REV__ENST00000376911.1_1_9:75773422-75773617:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2654113769531	2	437.264956	872.515359	0.03062	1.3389E-05	1.7544	0.00076715	1.7851	0.00078054	437.2656144717129	22.266	1.1262	22.354	22.073	23.199	0.088013					130	57	3	0	0	0	0.85277	1	686	686		25.45	0	1	2198600	+		54313	24341	36224	36239	61542	61542					0.07400220893396181
SKMKLLGP	8	Unmodified	_SKMKLLGP_					0	0	0			REV__ENST00000376911.1_1_9:75773422-75773617:+|nuORF	REV__ENST00000376911.1_1_9:75773422-75773617:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2655334472656	2	437.264956	872.515359	0.044356	1.9395E-05	1.5469	0.00067641	1.5913	0.0006958	437.26562029129207	23.787	1.9639	23.882	23.206	25.169	0.094501					226	94	5	0	0	0	0.87922	1	771	771		31.955	1.4512	1	2622700	+		54314	24341	36224	36239	61543	61543					0.07400220893396181
SKMKLLGP	8	Unmodified	_SKMKLLGP_					0	0	0			REV__ENST00000376911.1_1_9:75773422-75773617:+|nuORF	REV__ENST00000376911.1_1_9:75773422-75773617:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.265869140625	2	437.264956	872.515359	-1.0744	-0.0004698	2.9582	0.0012935	1.8838	0.00082372	437.26614564718045	29.159	4.5071	29.129	28.693	33.2	-0.029209					167	103	2	0	0	0	0.86288	1	1799	1799		26.796	2.5934	1	552070	+		54315	24341	36224	36239	61544	61544					0.07400220893396181
SKNGEQVCKGD	11	Unmodified	_SKNGEQVCKGD_					0	0	0			REV__ENSG00000168813|ENST00000355898|ZNF507	REV__ENSG00000168813|ENST00000355898|ZNF507	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.771240234375	2	582.769319	1163.52409	-0.74972	-0.00043691	1.0657	0.00062105	0.31596	0.00018413	582.7700657576331	52.381	0.77937	52.377	52.032	52.812	-0.0033035					36	19	3	0	0	0	0.72739	1	4543	4543		27.047	0.3544	1	153160	+		54316	21523	36225	36240	61545	61545					-0.05113501998744141
SKPALLLP	8	Unmodified	_SKPALLLP_					0	0	0			REV__ENST00000495037.1_1_3:66430689-66454678:-|nuORF	REV__ENST00000495037.1_1_3:66430689-66454678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7748107910156	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.87064	1	3265	3265		29.15	0.89528	1	10965000	+		54317	19911	36226	36241	61546	61546					0.10712464770847419
SKPALLLP	8	Unmodified	_SKPALLLP_					0	0	0			REV__ENST00000495037.1_1_3:66430689-66454678:-|nuORF	REV__ENST00000495037.1_1_3:66430689-66454678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7753601074219	2	419.773471	837.53239	2.2196	0.00093172	1.7406	0.00073065	3.9602	0.0016624	419.7741067165764	52.137	1.9692	52.15	50.995	52.964	0.01244					76	47	2	0	0	0	0.87064	1	4522	4522		29.15	4.9468	1	186930	+		54318	19911	36226	36241	61547	61547					0.10712464770847419
SKPARVKAS	9	Unmodified	_SKPARVKAS_					0	0	0		nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC;nc|ENSG00000041982|P24821-6|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC	nc|ENSG00000041982|P24821-4|TNC	nc|ENSG00000041982|P24821-4|TNC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2896423339844	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.7932	1	12601	12601		23.523	0.48021	1	3080300			54319	934	36227	36242	61548	61548					0.0874858239999412
SKPATNQLIK	10	Unmodified	_SKPATNQLIK_					0	0	0			REV__ENSG00000171094|ENST00000389048|ALK	REV__ENSG00000171094|ENST00000389048|ALK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.3267822265625	2	550.327131	1098.63971	-0.59914	-0.00032972	0.77743	0.00042784	0.1783	9.8121E-05	550.3275633204873	100.31	1.098	100.35	99.837	100.93	0.041107					67	24	4	0	0	0	0.86698	1	10721	10721		28.081	3.5623	1	446840	+		54320	21709	36228	36243	61549	61549					0.09433389914420331
SKPELKKVF	9	Unmodified	_SKPELKKVF_					0	0	0			REV__nc|ENSG00000180953|Q9HBF5|ST20	REV__nc|ENSG00000180953|Q9HBF5|ST20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3267211914062	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12284	12284		25.574	2.0514	1	4041000	+		54321	30072	36229	36244	61550	61550					0.10939479408125408
SKPETMEASY	10	Oxidation (M)	_SKPETM(Oxidation (M))EASY_		SKPETM(1)EASY		SKPETM(40)EASY	0	0	1			REV__nc|ENSG00000160179|P45844-6|ABCG1	REV__nc|ENSG00000160179|P45844-6|ABCG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.7539672851562	2	579.752804	1157.49105	0.37513	0.00021749	0.69295	0.00040174	1.0681	0.00061923	579.7531276961427	78.292	0.83783	78.239	77.877	78.715	-0.053558					78	25	4	0	0	0	0.78666	1	7773	7773		40.058	8.1033	1	568320	+		54322	20697	36230	36245	61551	61551		307			-0.08139128841457932
SKPKFKTRR	9	Unmodified	_SKPKFKTRR_					0	0	0		ENST00000597451.5_1_19:18684168-18684498:+|nuORF	ENST00000597451.5_1_19:18684168-18684498:+|nuORF	ENST00000597451.5_1_19:18684168-18684498:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3562622070312	2	574.356557	1146.69856	-1.0357	-0.00059487	-0.061954	-3.5583E-05	-1.0977	-0.00063045	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.58063	1	10634	10634		47.96	13.787	1	715310			54323	14357	36231	36246	61552	61552					0.13107910999428896
SKPKKPRPKSV	11	Unmodified	_SKPKKPRPKSV_					0	0	0		ENST00000483991.5_1_9:138703157-138717996:-|nuORF;nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;ENSG00000130559|ENST00000389532|CAMSAP1;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	ENST00000483991.5_1_9:138703157-138717996:-|nuORF	ENST00000483991.5_1_9:138703157-138717996:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	627.3826293945312	2	626.398422	1250.78229	1.3708	0.00085869	-3.6913	-0.0023122	-2.3205	-0.0014535	626.3958587815516	111.63	0.35339	111.74	111.59	111.94	0.11118					20	10	2	0	0	0	0.17552	1	12050	12050		12.207	0	1	3083900			54324	3656	36232	36247	61553	61553					0.16693022376466615
SKPKLYIISA	10	Unmodified	_SKPKLYIISA_					0	0	0			REV__nc|ENSG00000196266|Q5JRS4|OR10J3	REV__nc|ENSG00000196266|Q5JRS4|OR10J3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3396606445312	2	560.342249	1118.66995	0.39664	0.00022225	-3.4771	-0.0019484	-3.0805	-0.0017261	560.3401597045467	105.5	0.96318	105.66	104.96	105.92	0.15924					88	24	4	0	0	0	0.86763	1	11284	11284		26.693	2.1737	1	1617200	+		54325	30127	36233	36248	61554	61554					0.11535748579603933
SKPKLYIISA	10	Unmodified	_SKPKLYIISA_					0	0	0			REV__nc|ENSG00000196266|Q5JRS4|OR10J3	REV__nc|ENSG00000196266|Q5JRS4|OR10J3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3419189453125	2	560.342249	1118.66995	0.39589	0.00022184	-3.6597	-0.0020507	-3.2638	-0.0018288	560.3400879861559	106.89	0.89037	107.04	106.56	107.45	0.14843					60	21	3	0	0	0	0.86272	1	11398	11398		24.519	3.5723	1	1239500	+		54326	30127	36233	36248	61555	61555					0.11535748579603933
SKPKLYIISA	10	Unmodified	_SKPKLYIISA_					0	0	0			REV__nc|ENSG00000196266|Q5JRS4|OR10J3	REV__nc|ENSG00000196266|Q5JRS4|OR10J3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.340576171875	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.86348	1	12142	12142		31.53	2.3598	1	4071000	+		54327	30127	36233	36248	61556	61556					0.11535748579603933
SKPKRKERKRD	11	Unmodified	_SKPKRKERKRD_					0	0	0			REV__chr19:40750937-40751387|62|29.68|0.99|4.9|+|ENST00000597353|SNRPA,SNRPA	REV__chr19:40750937-40751387|62|29.68|0.99|4.9|+|ENST00000597353|SNRPA,SNRPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6222839355469	3	476.623303	1426.84808	-1.6911	-0.000806	2.5351	0.0012083	0.84407	0.0004023	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.77511	1	12480	12480		16.53	3.5724	1	2577100	+		54328	15703	36234	36249	61557	61557					0.15172811551337873
SKPRSLVDTT	10	Unmodified	_SKPRSLVDTT_					0	0	0			REV__chr6:70699512-70732378|16|17.38|0.56|4.96|+|2|TE_info:L1MA3,L1MA3_dup3493,L1,LINE,donor,-,70697606,70699512|None,SMAP1|28	REV__chr6:70699512-70732378|16|17.38|0.56|4.96|+|2|TE_info:L1MA3,L1MA3_dup3493,L1,LINE,donor,-,70697606,70699512|None,SMAP1|28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.82421875	2	552.306395	1102.59824	0.77405	0.00042751	-0.50986	-0.0002816	0.26419	0.00014592	552.306238373589	81.51	1.7341	81.568	80.996	82.731	0.057808					55	39	2	0	0	0	0.86348	1	8145	8145		31.53	3.4483	1	44729	+		54329	15889	36235	36250	61558	61558					0.05104209155092576
SKPVHVGI	8	Unmodified	_SKPVHVGI_					0	0	0			REV__ENSG00000080493|ENST00000264485|SLC4A4	REV__ENSG00000080493|ENST00000264485|SLC4A4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.76446533203125	2	418.75307	835.491587	0.87016	0.00036438	0.2279	9.5433E-05	1.0981	0.00045982	418.75259999384315	33.254	0.33925	33.424	33.187	33.526	0.16971					11	7	2	0	0	0	0.4196	1	2384	2384		31.955	0	1	33850	+		54330	16801	36236	36251	61559	61559					0.06726123451232979
SKQCGTDMKT	10	Unmodified	_SKQCGTDMKT_					0	0	0		L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|21|1|sense	L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|21|1|sense	L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|21|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.7484741210938	2	549.749541	1097.48453	0.39164	0.0002153	4.1941	0.0023057	4.5857	0.002521	549.7517485511949	31.759	0.49414	31.708	31.472	31.966	-0.051033					15	10	2	0	0	0	0.70553	1	1818	1818		44.377	10.205	1	21793			54331	14582	36237	36252	61560	61560					-0.06031345273822808
SKQCGTDMKT	10	Unmodified	_SKQCGTDMKT_					0	0	0		L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|21|1|sense	L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|21|1|sense	L1MB3_dup17250|chr22:45828209-45831380:+|1.0600675342524384|0.0895967507308157|3.56|63.0|21|1|sense	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	549.749541	1097.48453	-0.29927	-0.00016452	4.978	0.0027367	4.6788	0.0025722	549.7518890498923	31.61	0.38283	31.628	31.432	31.815	0.01836	-0.014494	0.00083679	NaN	44.377	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29031			54332	14582	36237	36252							-0.06031345273822808
SKQFQKLKKKK	11	Unmodified	_SKQFQKLKKKK_					0	0	0			REV__ENSG00000035499|ENST00000265036|DEPDC1B	REV__ENSG00000035499|ENST00000265036|DEPDC1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2813720703125	3	464.301278	1389.882	-0.43085	-0.00020005	-3.9332	-0.0018262	-4.364	-0.0020262	464.29925204371796	51.447	0.7025	51.363	50.914	51.616	-0.084538					20	17	2	0	0	0	0.17911	1	4106	4106		13.508	4.2961	1	59456	+		54333	16287	36238	36253	61561	61561					0.20265839990383938
SKQFQKLKKKK	11	Unmodified	_SKQFQKLKKKK_					0	0	0			REV__ENSG00000035499|ENST00000265036|DEPDC1B	REV__ENSG00000035499|ENST00000265036|DEPDC1B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	464.301278	1389.882	-0.68855	-0.00031969	-4.5143	-0.002096	-5.2029	-0.0024157	464.6335986880216	51.377	0.45872	51.354	51.027	51.486	-0.02343	-0.0045719	-0.00040938	NaN	13.508	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28546	+		54334	16287	36238	36253							0.20265839990383938
SKQFRTCLK	9	Unmodified	_SKQFRTCLK_					0	0	0		chr13:113194326-113195071|13|25.62|0.56|5.5|-|1|TE_info:L1MDa,L1MDa_dup5470,L1,LINE,acceptor,-,113193724,113194326|None,PCID2|8	chr13:113194326-113195071|13|25.62|0.56|5.5|-|1|TE_info:L1MDa,L1MDa_dup5470,L1,LINE,acceptor,-,113193724,113194326|None,PCID2|8	chr13:113194326-113195071|13|25.62|0.56|5.5|-|1|TE_info:L1MDa,L1MDa_dup5470,L1,LINE,acceptor,-,113193724,113194326|None,PCID2|8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.8043212890625	2	555.808051	1109.60155	0.60306	0.00033519	-3.9482	-0.0021944	-3.3451	-0.0018592	555.8058596717976	59.48	0.90499	59.448	59.077	59.982	-0.031731					51	22	3	0	0	0	0.76419	1	5611	5611		35.152	3.1972	1	344520			54335	148	36239	36254	61562	61562					0.051131807280853536
SKQGKRAV	8	Unmodified	_SKQGKRAV_					0	0	0			REV__ENSG00000168275|ENST00000366615|COA6	REV__ENSG00000168275|ENST00000366615|COA6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2679138183594	2	437.266876	872.519199	-2.1366	-0.00093428	-0.53823	-0.00023535	-2.6749	-0.0011696	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.8347	1	646	646		23.042	1.0826	1	999210	+		54336	21475	36240	36255	61563	61563					0.0778402671146523
SKQGKRAV	8	Unmodified	_SKQGKRAV_					0	0	0			REV__ENSG00000168275|ENST00000366615|COA6	REV__ENSG00000168275|ENST00000366615|COA6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26519775390625	2	437.266876	872.519199	-2.1128	-0.00092385	-0.58974	-0.00025787	-2.7025	-0.0011817	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.87922	1	834	834		31.955	2.8053	1	1366900	+		54337	21475	36240	36255	61564	61564					0.0778402671146523
SKQLRAPSA	9	Unmodified	_SKQLRAPSA_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2776794433594	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.75725	1	8501	8501		36.447	2.5251	1	6593200	+		54338	15467	36241	36256	61565	61565					0.06031992020314192
SKQLRAPSA	9	Unmodified	_SKQLRAPSA_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2774658203125	2	479.277441	956.540328	-0.72512	-0.00034753	0.71589	0.00034311	-0.0092246	-4.4211E-06	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.71772	1	9589	9589		39.253	6.4404	1	1822400	+		54339	15467	36241	36256	61566	61566					0.06031992020314192
SKQPLPRRAK	10	Unmodified	_SKQPLPRRAK_					0	0	0			REV__ENST00000495807.1_1_6:31827284-31827329:-|nuORF	REV__ENST00000495807.1_1_6:31827284-31827329:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8668823242188	2	590.867289	1179.72002	-1.319	-0.00077937	-0.16176	-9.558E-05	-1.4808	-0.00087495	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.64457	1	11088	11088		47.657	3.5405	1	81379000	+		54340	27742	36242	36257	61567	61567					0.13735296028107769
SKQPLPRRAK	10	Unmodified	_SKQPLPRRAK_					0	0	0			REV__ENST00000495807.1_1_6:31827284-31827329:-|nuORF	REV__ENST00000495807.1_1_6:31827284-31827329:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8671875	2	590.867289	1179.72002	1.3812	0.0008161	-2.2271	-0.0013159	-0.8459	-0.00049981	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.86718	1	12588	12588		27.882	0	1	6168400	+		54341	27742	36242	36257	61568	61568					0.13735296028107769
SKQQRLQL	8	Unmodified	_SKQQRLQL_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.799072265625	2	500.79854	999.582528	-0.065162	-3.2633E-05	-1.6975	-0.00085009	-1.7626	-0.00088273	500.79757326318753	94.542	1.5024	94.611	94.008	95.511	0.068344					48	35	2	0	0	0	0.89043	1	9901	9901		35.618	0	1	553460	+		54342	22085	36243	36258	61569	61569					0.08271967428709104
SKQRHLWRTRE	11	Unmodified	_SKQRHLWRTRE_					0	0	0			REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.61163330078125	3	499.611285	1495.81203	1.0313	0.00051525	-2.2264	-0.0011124	-1.1951	-0.0005971	499.6100897987355	16.518	0.16818	16.595	16.475	16.643	0.07715					14	6	3	0	0	0	0.75779	1	110	110		20.315	6.229	1	58138	+		54343	26693	36244	36259	61570	61570					0.08395354374465569
SKQRHLWRTRE	11	Unmodified	_SKQRHLWRTRE_					0	0	0			REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	499.611285	1495.81203	-1.9223	-0.00096038	0.56787	0.00028371	-1.3544	-0.00067667	499.61159267036095	16.637	0.21203	16.637	16.513	16.725	0	0.042058	0.0027357	NaN	20.315	15	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57331	+		54344	26693	36244	36259							0.08395354374465569
SKQRHLWRTRE	11	Unmodified	_SKQRHLWRTRE_					0	0	0			REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	499.611285	1495.81203	1.0313	0.00051525	-2.2264	-0.0011124	-1.1951	-0.0005971	499.6100897987355	16.518	0.16818	16.595	16.475	16.643	0.07715	3.7139E-05	-0.0014525	NaN	20.315	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58138	+		54345	26693	36244	36259							0.08395354374465569
SKQRHLWRTRE	11	Unmodified	_SKQRHLWRTRE_					0	0	0			REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	499.611285	1495.81203	-0.65161	-0.00032555	-0.28179	-0.00014079	-0.93339	-0.00046633	499.9455537836268	16.532	0.22576	16.58	16.484	16.71	0.047802	-0.01552	0.0014622	NaN	20.315	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73553	+		54346	26693	36244	36259							0.08395354374465569
SKQRHLWRTRE	11	Unmodified	_SKQRHLWRTRE_					0	0	0			REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	499.611285	1495.81203	0.080971	4.0454E-05	-1.0278	-0.00051349	-0.94681	-0.00047303	499.94521830209015	16.538	0.20651	16.597	16.486	16.692	0.059269	0.0021216	0.00034413	NaN	20.315	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128160	+		54347	26693	36244	36259							0.08395354374465569
SKQRHLWRTRE	11	Unmodified	_SKQRHLWRTRE_					0	0	0			REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	499.611285	1495.81203	-0.033037	-1.6506E-05	-1.4213	-0.0007101	-1.4543	-0.00072661	499.6105491685581	17.085	0.31155	16.602	16.493	16.804	-0.48256	0.00692	-0.00024571	NaN	20.315	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53106	+		54348	26693	36244	36259							0.08395354374465569
SKQRHLWRTRE	11	Unmodified	_SKQRHLWRTRE_					0	0	0			REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	REV__ENST00000436639.6_1_6:109415622-109415931:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	499.611285	1495.81203	0.33678	0.00016826	-1.714	-0.00085633	-1.3772	-0.00068806	499.6103318715263	17.134	0.22661	16.523	16.386	16.613	-0.6107	-0.072103	-0.00068438	NaN	20.315	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49673	+		54349	26693	36244	36259							0.08395354374465569
SKQRYTGGVS	10	Unmodified	_SKQRYTGGVS_					0	0	0			REV__nc|ENSG00000197555|O43166-3|SIPA1L1	REV__nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.78564453125	2	541.783087	1081.55162	-0.22268	-0.00012064	4.2763	0.0023168	4.0536	0.0021962	541.7852590351226	56.903	1.7601	56.891	56.59	58.35	-0.012203					157	62	4	0	0	0	0.097274	4	5097	5097;5140;5148;5230		101.6	13.846	1	5602900	+		54350	23244	36245	36260	61571;61572;61573;61574	61571					0.014107693237974672
SKQRYTGGVS	10	Unmodified	_SKQRYTGGVS_					0	0	0			REV__nc|ENSG00000197555|O43166-3|SIPA1L1	REV__nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7850952148438	2	541.783087	1081.55162	0.62479	0.0003385	3.3885	0.0018358	4.0132	0.0021743	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.019425	4	5227	5198;5217;5227;5257		122.18	29.033	1	5802700	+		54351	23244	36245	36260	61575;61576;61577;61578	61577					0.014107693237974672
SKQRYTGGVS	10	Unmodified	_SKQRYTGGVS_					0	0	0			REV__nc|ENSG00000197555|O43166-3|SIPA1L1	REV__nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.7852172851562	2	541.783087	1081.55162	-0.1772	-9.6005E-05	4.2322	0.0022929	4.055	0.0021969	541.7852873202811	56.84	2.4261	56.873	56.56	58.986	0.033184					182	81	4	0	0	0	0.097274	7	5158	5121;5139;5158;5168;5235;5244;5252		101.6	19.36	1	6132200	+		54352	23244	36245	36260	61579;61580;61581;61582;61583;61584;61585	61581					0.014107693237974672
SKRFLKGF	8	Unmodified	_SKRFLKGF_					0	0	0			REV__nc|ENSG00000023287|Q8TDY2-2|RB1CC1	REV__nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.794677734375	2	491.795269	981.575986	-0.17405	-8.5598E-05	1.0809	0.00053159	0.90686	0.00044599	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.87479	1	3349	3349		30.504	0	1	2994900	+		54353	16248	36246	36261	61586	61586					0.08446074267988024
SKRFLKGF	8	Unmodified	_SKRFLKGF_					0	0	0			REV__nc|ENSG00000023287|Q8TDY2-2|RB1CC1	REV__nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7950134277344	2	491.795269	981.575986	-0.41148	-0.00020237	1.3216	0.00064997	0.91013	0.0004476	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.8347	1	4262	4262		23.042	1.3402	1	887820	+		54354	16248	36246	36261	61587	61587					0.08446074267988024
SKRGEEWVSQ	10	Unmodified	_SKRGEEWVSQ_					0	0	0			REV__ENST00000553115.1_1_12:55516583-55517273:-|nuORF	REV__ENST00000553115.1_1_12:55516583-55517273:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7059326171875	3	402.53516	1204.58365	1.614	0.00064967	-1.7627	-0.00070956	-0.14878	-5.9888E-05	402.5346844713728	25.35	0.39244	25.022	24.838	25.23	-0.32825					12	8	2	0	0	0	0.37624	1	1278	1278		37.508	6.9393	1	33626	+		54355	28638	36247	36262	61588	61588					-0.010458629930553798
SKRHKVSLIGN	11	Unmodified	_SKRHKVSLIGN_					0	0	0			REV__nc|ENSG00000164338|Q8TED0-2|UTP15	REV__nc|ENSG00000164338|Q8TED0-2|UTP15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8695068359375	2	619.870028	1237.7255	-0.2143	-0.00013284	-0.85851	-0.00053217	-1.0728	-0.000665	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.69931	1	9297	9297		31.634	2.4847	1	1169100	+		54356	21073	36248	36263	61589	61589					0.11614974819940471
SKRILFSIVH	10	Unmodified	_SKRILFSIVH_					0	0	0		ENSG00000006704|ENST00000424337|GTF2IRD1;nc|ENSG00000006704|Q9UHL9|GTF2IRD1;nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1	ENSG00000006704|ENST00000424337|GTF2IRD1	ENSG00000006704|ENST00000424337|GTF2IRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.5803527832031	3	400.580152	1198.71863	-0.18596	-7.4493E-05	0.9652	0.00038664	0.77924	0.00031215	400.58045429984315	118.58	0.28901	118.5	118.43	118.71	-0.07531					12	9	2	0	0	0	0.86151	1	12720	12720		15.333	0.63944	1	294660			54357	709	36249	36264	61590	61590					0.1272166193934936
SKRILFSIVH	10	Unmodified	_SKRILFSIVH_					0	0	0		ENSG00000006704|ENST00000424337|GTF2IRD1;nc|ENSG00000006704|Q9UHL9|GTF2IRD1;nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1	ENSG00000006704|ENST00000424337|GTF2IRD1	ENSG00000006704|ENST00000424337|GTF2IRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5808410644531	3	400.580152	1198.71863	3.1807	0.0012741	-2.2259	-0.00089164	0.9548	0.00038247	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.85633	1	12506	12506		21.686	0.8486	1	88404			54358	709	36249	36264	61591	61591					0.1272166193934936
SKRILFSIVH	10	Unmodified	_SKRILFSIVH_					0	0	0		ENSG00000006704|ENST00000424337|GTF2IRD1;nc|ENSG00000006704|Q9UHL9|GTF2IRD1;nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1	ENSG00000006704|ENST00000424337|GTF2IRD1	ENSG00000006704|ENST00000424337|GTF2IRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5802307128906	3	400.580152	1198.71863	3.4037	0.0013634	-2.3356	-0.00093561	1.068	0.00042784	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.85834	1	13656	13656		22.58	2.5492	1	5321000			54359	709	36249	36264	61592	61592					0.1272166193934936
SKRKSGGR	8	Unmodified	_SKRKSGGR_					0	0	0		nc|ENSG00000180539|Q6ZV77|LINC02908	nc|ENSG00000180539|Q6ZV77|LINC02908	nc|ENSG00000180539|Q6ZV77|LINC02908	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2630615234375	2	438.262125	874.509697	0.33792	0.0001481	2.2082	0.00096776	2.5461	0.0011159	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.82658	1	3617	3617		21.96	1.013	1	4268300			54360	15131	36250	36265	61593	61593					0.06742258425947512
SKRKTGVKEKG	11	Unmodified	_SKRKTGVKEKG_					0	0	0			REV__ENST00000325243.6_1_11:27828081-27828540:+|nuORF	REV__ENST00000325243.6_1_11:27828081-27828540:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5843200683594	3	406.582333	1216.72517	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.99	1	112.03	111.53	112.53	0.041832								0	0	0	0.56276	1	13545	13545		17.833	0	1		+		54361	25058	36251	36266	61594	61594					0.1254755510008181
SKRLHKIPT	9	Unmodified	_SKRLHKIPT_					0	0	0			REV__ENSG00000279169|ENST00000625019|PRAMEF13	REV__ENSG00000279169|ENST00000625019|PRAMEF13	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.0066528320312	2	540.337833	1078.66111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.097	1	57.203	56.703	57.703	0.1055								0	0	0	0.31437	1	4832	4832		25.574	2.5316	1		+		54362	23497	36252	36267	61595	61595					0.1249281973377947
SKRLLTLTHR	10	Unmodified	_SKRLLTLTHR_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.92218017578125	3	408.922689	1223.74624	2.7179	0.0011114	-3.8241	-0.0015638	-1.1062	-0.00045236	408.92110256360985	104.72	4.0561	104.68	103.08	107.14	-0.04039					239	96	4	0	0	0	0.84816	1	11561	11561		12.433	1.3361	1	3838400			54363	6228	36253	36268	61596	61596					0.14331565199586294
SKRLQGRLPGL	11	Unmodified	_SKRLQGRLPGL_					0	0	0		ENSG00000165716|ENST00000371692|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	ENSG00000165716|ENST00000371692|DIPK1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.9222412109375	3	408.922689	1223.74624	-1.9234	-0.00078652	0.84702	0.00034637	-1.0764	-0.00044016	408.9230151046432	104.46	2.832	104.56	103.59	106.42	0.093857					212	70	5	0	0	0	0.7434	1	11021	11021		21.032	5.1116	1	2027500			54364	6117	36254	36269	61597	61597					0.1433156519960903
SKRLRRHYIK	10	Unmodified	_SKRLRRHYIK_					0	0	0			REV__nc|ENSG00000106823|O94769-2|ECM2	REV__nc|ENSG00000106823|O94769-2|ECM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.9482116699219	3	452.94935	1355.82622	-1.7681	-0.00080086	-0.5215	-0.00023621	-2.2896	-0.0010371	452.9490232633925	106.96	1.0839	107.01	106.56	107.64	0.053757					98	25	5	0	0	0	0.86014	1	11382	11382		23.378	2.3457	1	4103500	+		54365	17633	36255	36270	61598	61598					0.16254051593455188
SKRPPLVF	8	Unmodified	_SKRPPLVF_					0	0	0			REV__ENSG00000161010|ENST00000292586|MRNIP	REV__ENSG00000161010|ENST00000292586|MRNIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2878112792969	2	472.28982	942.565087	-1.7052	-0.00080536	-2.8033	-0.001324	-4.5086	-0.0021293	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.884	1	9911	9911		33.516	1.9858	1	40161000	+		54366	20757	36256	36271	61599	61599					0.09150671893701201
SKRQSSYVQ	9	Unmodified	_SKRQSSYVQ_					0	0	0			REV__ENSG00000184012|ENST00000332149|TMPRSS2	REV__ENSG00000184012|ENST00000332149|TMPRSS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7850952148438	2	541.783087	1081.55162	0.62479	0.0003385	3.3885	0.0018358	4.0132	0.0021743	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.78536	1	5331	5331		29.15	0	1	5802700	+		54367	22641	36257	36272	61600	61600					0.014107693237974672
SKRRHWRRRKL	11	Unmodified	_SKRRHWRRRKL_					0	0	0		ENST00000478577.1_1_17:54650436-54650553:+|nuORF	ENST00000478577.1_1_17:54650436-54650553:+|nuORF	ENST00000478577.1_1_17:54650436-54650553:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3240966796875	3	526.994064	1577.96036	0.4619	0.00024342	-2.0646	-0.0010881	-1.6027	-0.00084463	526.9936276597986	60.087	0.17812	60.204	60.092	60.27	0.11676					6	4	2	0	0	0	0.18396	1	5185	5185		1.0704	0.75811	1	34196			54368	12392	36258	36273	61601	61601					0.1945013013882999
SKRRHWRRRKL	11	Unmodified	_SKRRHWRRRKL_					0	0	0		ENST00000478577.1_1_17:54650436-54650553:+|nuORF	ENST00000478577.1_1_17:54650436-54650553:+|nuORF	ENST00000478577.1_1_17:54650436-54650553:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3248291015625	3	526.994064	1577.96036	0.45647	0.00024056	0.96225	0.0005071	1.4187	0.00074766	526.9955669434984	59.496	0.3371	59.61	59.388	59.725	0.11396					10	7	2	0	0	0	0.1841	1	5083	5083		1.3219	0	1	66469			54369	12392	36258	36273	61602	61602					0.1945013013882999
SKRRKGQRVH	10	Unmodified	_SKRRKGQRVH_					0	0	0			REV__ENSG00000143512|ENST00000343410|HHIPL2	REV__ENSG00000143512|ENST00000343410|HHIPL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.92236328125	3	417.921683	1250.74322	2.7179	0.0011359	-1.2598	-0.00052649	1.4581	0.00060938	417.9211507262476	105.91	2.7799	105.88	105.06	107.84	-0.03714					241	65	4	0	0	0	0.86551	1	11722	11722		14.694	14.694	1	23169000	+		54370	19818	36259	36274	61603	61603					0.1278773486544651
SKRRKICPSK	10	Unmodified	_SKRRKICPSK_					0	0	0		ENST00000606915.1_1_6:150240342-150240588:+|nuORF	ENST00000606915.1_1_6:150240342-150240588:+|nuORF	ENST00000606915.1_1_6:150240342-150240588:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	601.8583374023438	2	601.861149	1201.70774	-1.2832	-0.00077232	-4.3331	-0.0026079	-5.6164	-0.0033803	601.8583669122717	103.38	2.0705	103.5	103.11	105.18	0.11494					139	51	4	0	0	0	0.86587	1	10843	10843		29.17	4.6509	1	2503700			54371	14453	36260	36275	61604	61604					0.11495936293408704
SKRRKIFKKKL	11	Unmodified	_SKRRKIFKKKL_					0	0	0			REV__ENSG00000011114|ENST00000334746|BTBD7	REV__ENSG00000011114|ENST00000334746|BTBD7	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.9919128417969	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.105	1	75.231	74.731	75.731	0.12545								0	0	0	0.56276	1	6971	6971		3.2113	0.67732	1		+		54372	16177	36261	36276	61605	61605					0.2579322787257752
SKRRKIFKKKL	11	Unmodified	_SKRRKIFKKKL_					0	0	0			REV__ENSG00000011114|ENST00000334746|BTBD7	REV__ENSG00000011114|ENST00000334746|BTBD7	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.99139404296875	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.333	1	75.459	74.959	75.959	0.12545								0	0	0	0.56276	1	7002	7002		11.455	8.7666	1		+		54373	16177	36261	36276	61606	61606					0.2579322787257752
SKRRKIFKKKL	11	Unmodified	_SKRRKIFKKKL_					0	0	0			REV__ENSG00000011114|ENST00000334746|BTBD7	REV__ENSG00000011114|ENST00000334746|BTBD7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.992431640625	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.859	1	72.244	71.744	72.744	0.38449								0	0	0	0.56276	1	8010	8010		3.2113	0.52328	1		+		54374	16177	36261	36276	61607	61607					0.2579322787257752
SKRRKIFKKKL	11	Unmodified	_SKRRKIFKKKL_					0	0	0			REV__ENSG00000011114|ENST00000334746|BTBD7	REV__ENSG00000011114|ENST00000334746|BTBD7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.9927978515625	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.021	1	73.409	72.909	73.909	0.38779								0	0	0	0.56276	1	8178	8178		3.2113	1.9794	1		+		54375	16177	36261	36276	61608	61608					0.2579322787257752
SKRRKIFKKKL	11	Unmodified	_SKRRKIFKKKL_					0	0	0			REV__ENSG00000011114|ENST00000334746|BTBD7	REV__ENSG00000011114|ENST00000334746|BTBD7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.9924621582031	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.94	1	72.49	71.99	72.99	0.55008								0	0	0	0.56276	1	8056	8056		3.2113	0	1		+		54376	16177	36261	36276	61609	61609					0.2579322787257752
SKRRKIFKKKL	11	Unmodified	_SKRRKIFKKKL_					0	0	0			REV__ENSG00000011114|ENST00000334746|BTBD7	REV__ENSG00000011114|ENST00000334746|BTBD7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.9927062988281	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.306	1	72.856	72.356	73.356	0.55008								0	0	0	0.56276	1	8109	8109		5.1424	3.8204	1		+		54377	16177	36261	36276	61610	61610					0.2579322787257752
SKRRKIFKKKL	11	Unmodified	_SKRRKIFKKKL_					0	0	0			REV__ENSG00000011114|ENST00000334746|BTBD7	REV__ENSG00000011114|ENST00000334746|BTBD7	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.99261474609375	3	477.992667	1430.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.939	1	73.493	72.993	73.993	0.55386								0	0	0	0.56276	1	8201	8201		1.3219	0	1		+		54378	16177	36261	36276	61611	61611					0.2579322787257752
SKRSKTGKI	9	Unmodified	_SKRSKTGKI_					0	0	0		L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|48|2|sense	L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|48|2|sense	L1MA3_dup3732|chr6:133491972-133494558:+|1.2607931672738832|0.0167628959288429|6.23|60.0|48|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	502.8139343261719	2	502.81419	1003.61383	-0.072215	-3.6311E-05	-1.0272	-0.00051647	-1.0994	-0.00055278	502.8137358537146	97.184	3.7296	97.233	96.655	100.38	0.048157					256	86	5	0	0	0	0.77244	1	10366	10366		32.812	2.3088	1	22931000			54379	14540	36262	36277	61612	61612					0.11216540462805824
SKSAAVISA	9	Unmodified	_SKSAAVISA_					0	0	0			REV__ENSG00000153551|ENST00000334983|CMTM7	REV__ENSG00000153551|ENST00000334983|CMTM7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.24041748046875	2	417.239993	832.465432	-1.8972	-0.0007916	-0.44565	-0.00018594	-2.3429	-0.00097755	417.23961166922066	88.228	1.9938	88.397	87.781	89.775	0.16923					117	46	5	0	0	0	0.7932	1	8725	8725		25.574	2.5316	1	1025300	+		54380	20350	36263	36278	61613	61613					0.042498094890902394
SKSISLGLWVL	11	Unmodified	_SKSISLGLWVL_					0	0	0			REV__ENST00000596094.5_1_19:56884582-56885033:+|nuORF	REV__ENST00000596094.5_1_19:56884582-56885033:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	601.8580322265625	2	601.860806	1201.70706	-1.2832	-0.00077232	-3.7637	-0.0022652	-5.0469	-0.0030375	601.8583669122717	103.38	2.0705	103.5	103.11	105.18	0.11494					139	51	4	0	0	0	0.6921	2	10867	10867;10949		32.812	3.6629	1	2503700	+		54381	27166	36264	36279	61614;61615	61614					0.11427420125369281
SKSRTRIG	8	Unmodified	_SKSRTRIG_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.76849365234375	2	452.769783	903.525013	-1.6999	-0.00076965	-1.0085	-0.0004566	-2.7083	-0.0012263	452.76922459739603	29.888	2.1263	29.917	28.5	30.627	0.028618					94	48	4	0	0	0	0.87064	1	1927	1927		29.15	0	1	831070	+		54382	23358	36265	36280	61616	61616					0.06939125223118481
SKSSLKSA	8	Unmodified	_SKSSLKSA_					0	0	0			REV__ENSG00000153253|ENST00000283254|SCN3A;REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF;REV__nc|ENSG00000144285|P35498-3|SCN1A	REV__ENSG00000153253|ENST00000283254|SCN3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2324523925781	2	404.232168	806.449782	2.8761	0.0011626	-0.84201	-0.00034037	2.0341	0.00082225	404.23172699693646	84.942	3.8028	85.001	83.068	86.871	0.05925					165	87	2	0	0	0	0.80514	1	8557	8557		19.104	0	1	4761400	+		54383	15734;19317;19879	36266	36281	61617	61617					0.03881522972039875
SKSTGKSI	8	Unmodified	_SKSTGKSI_					0	0	0			REV__ENST00000416249.1_1_10:112629578-112631155:+|nuORF	REV__ENST00000416249.1_1_10:112629578-112631155:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2317199707031	2	404.232168	806.449782	-1.2204	-0.00049332	3.4349	0.0013885	2.2146	0.00089519	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.86677	1	7964	7964		27.882	2.4321	1	2752600	+		54384	26432	36267	36282	61618	61618					0.03881522972039875
SKSVVKID	8	Unmodified	_SKSVVKID_					0	0	0			REV__ENST00000584437.5_1_17:56493845-56493935:-|nuORF	REV__ENST00000584437.5_1_17:56493845-56493935:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26239013671875	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.8537	1	3456	3456		25.574	1.3713	1	4268300	+		54385	29078	36268	36283	61619	61619					0.07010669040232642
SKSVVKID	8	Unmodified	_SKSVVKID_					0	0	0			REV__ENST00000584437.5_1_17:56493845-56493935:-|nuORF	REV__ENST00000584437.5_1_17:56493845-56493935:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2670593261719	2	438.263468	874.512382	-0.087987	-3.8562E-05	0.8122	0.00035596	0.72422	0.0003174	438.2637207814046	39.241	0.97984	39.189	38.905	39.885	-0.052727					39	26	2	0	0	0	0.84341	1	2411	2411		24.203	1.1603	1	79258	+		54386	29078	36268	36283	61620	61620					0.07010669040232642
SKTAKEIV	8	Unmodified	_SKTAKEIV_					0	0	0			REV__ENSG00000223601|ENST00000422359|EBLN1	REV__ENSG00000223601|ENST00000422359|EBLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26324462890625	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.87064	1	3129	3129		29.15	2.4566	1	21381000	+		54387	23728	36269	36284	61621	61621					0.07010669040221273
SKTDISWL	8	Unmodified	_SKTDISWL_					0	0	0		ENSG00000196074|ENST00000357552|SYCP2	ENSG00000196074|ENST00000357552|SYCP2	ENSG00000196074|ENST00000357552|SYCP2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.2518005371094	2	475.2531	948.491647	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.396	1	20.767	20.267	21.267	-0.62835								0	0	0	0.29403	1	775	775		32.812	2.3088	1				54388	8008	36270	36285	61622	61622					0.01534078660574778
SKTIQTLG	8	Unmodified	_SKTIQTLG_					0	0	0		ENSG00000155903|ENST00000286364|RASA2;nc|ENSG00000155903|Q15283|RASA2	ENSG00000155903|ENST00000286364|RASA2	ENSG00000155903|ENST00000286364|RASA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.2502136230469	2	424.247818	846.481082	2.8565	0.0012119	2.3047	0.00097775	5.1612	0.0021896	424.2488058967198	107.13	1.0598	107.16	106.76	107.82	0.035614					82	24	5	0	0	0	0.87922	1	11741	11741		31.955	0	1	4411900			54389	5350	36271	36286	61623	61623					0.05170096006145286
SKTKKMSNT	9	Unmodified	_SKTKKMSNT_					0	0	0			REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.77490234375	2	512.776416	1023.53828	0.2523	0.00012938	-4.1129	-0.002109	-3.8606	-0.0019796	512.774198051591	45.3	0.73182	45.281	44.968	45.7	-0.018585					35	16	3	0	0	0	0.76853	1	3548	3548		33.922	2.3918	1	555070	+		54390	20516	36272	36287	61624	61624					0.02745195220200003
SKTKKSHK	8	Unmodified	_SKTKKSHK_					0	0	0		ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2890319824219	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.77	1	116.74	116.24	117.24	-0.02433								0	0	0	0.29631	1	12936	12936		25.45	8.0852	1				54391	8315	36273	36288	61625	61625					0.0874858239999412
SKTKRNPI	8	Unmodified	_SKTKRNPI_					0	0	0			REV__ENST00000533415.5_1_17:45198303-45266605:-|nuORF	REV__ENST00000533415.5_1_17:45198303-45266605:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2893981933594	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.86677	1	12590	12590		27.882	4.8398	1	3080300	+		54392	16068	36274	36289	61626	61626					0.08748582399982752
SKTLGIKLKKN	11	Unmodified	_SKTLGIKLKKN_					0	0	0		nc|ENSG00000169918|Q8TE49|OTUD7A;ENSG00000169918|ENST00000307050|OTUD7A	nc|ENSG00000169918|Q8TE49|OTUD7A	nc|ENSG00000169918|Q8TE49|OTUD7A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.4056396484375	2	615.40063	1228.78671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.291	1	46.212	45.712	46.712	-0.079002								0	0	0	0.56276	1	3387	3387		18.262	3.3972	1				54393	6541	36275	36290	61627	61627					0.1814648679937818
SKTLTVKIFN	10	Unmodified	_SKTLTVKIFN_					0	0	0			REV__nc|ENSG00000104814|Q92918|MAP4K1	REV__nc|ENSG00000104814|Q92918|MAP4K1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8427124023438	2	575.845156	1149.67576	-1.368	-0.00078774	-2.3653	-0.001362	-3.7333	-0.0021498	575.8436459594299	90.372	2.9394	90.548	88.581	91.52	0.1758					221	69	4	0	0	0	0.86218	1	8887	8887		32.812	2.3088	1	2135900	+		54394	17474	36276	36291	61628	61628					0.10690847091291289
SKTVAVTRIG	10	Unmodified	_SKTVAVTRIG_					0	0	0			REV__ENST00000466883.5_1_7:65439809-65440058:-|nuORF	REV__ENST00000466883.5_1_7:65439809-65440058:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3145751953125	2	516.314023	1030.61349	1.9037	0.0009829	-1.9331	-0.0009981	-0.029436	-1.5198E-05	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.77314	1	12114	12114		40.778	0.20554	1	22616000	+		54395	21616	36277	36292	61629	61629					0.09941120742928433
SKVAGKELVPN	11	Unmodified	_SKVAGKELVPN_					0	0	0		ENST00000451424.1_1_1:20974977-20975394:-|nuORF	ENST00000451424.1_1_1:20974977-20975394:-|nuORF	ENST00000451424.1_1_1:20974977-20975394:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.3312377929688	2	571.332413	1140.65027	-1.1055	-0.00063161	-1.221	-0.00069761	-2.3265	-0.0013292	571.3317125893625	102.4	2.1601	102.42	101.65	103.81	0.01989					122	52	4	0	0	0	0.62614	1	11000	11000		41.427	4.9799	1	2384600			54396	11902	36278	36293	61630	61630					0.08557372568884603
SKVAGKELVPN	11	Unmodified	_SKVAGKELVPN_					0	0	0		ENST00000451424.1_1_1:20974977-20975394:-|nuORF	ENST00000451424.1_1_1:20974977-20975394:-|nuORF	ENST00000451424.1_1_1:20974977-20975394:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.3308715820312	2	571.332413	1140.65027	-1.3827	-0.00078998	-1.153	-0.00065874	-2.5357	-0.0014487	571.3317717910289	102.19	3.5699	102.32	101.59	105.16	0.1357					156	88	4	0	0	0	0.75164	1	10730	10730		21.686	2.5822	1	3715400			54397	11902	36278	36293	61631	61631					0.08557372568884603
SKVDVIQVRPL	11	Unmodified	_SKVDVIQVRPL_					0	0	0		ENST00000463155.5_1_1:241757732-241840646:-|nuORF;nc|ENSG00000203668|Q9H1Y3-2|OPN3;ENSG00000054277|ENST00000366554|OPN3	ENST00000463155.5_1_1:241757732-241840646:-|nuORF	ENST00000463155.5_1_1:241757732-241840646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3853759765625	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.70737	1	13002	13002		30.318	1.1477	1	19815000			54398	1017	36279	36294	61632	61632					0.13405609902679316
SKVILAELPED	11	Unmodified	_SKVILAELPED_					0	0	0		ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.2325744628906	3	405.227333	1212.66017	0.82003	0.0003323	2.2453	0.00090987	3.0654	0.0012422	405.22682922233946	84.725	0.47906	85.164	84.985	85.464	0.43967					13	11	2	0	0	0	0.17302	1	9902	9902		33.039	9.6615	1	37505			54399	7384	36280	36295	61633	61633					0.06234515783557981
SKVKVRHK	8	Unmodified	_SKVKVRHK_					0	0	0		nc|ENSG00000100207|Q9UGU0-2|TCF20;ENSG00000100207|ENST00000677622|TCF20	nc|ENSG00000100207|Q9UGU0-2|TCF20	nc|ENSG00000100207|Q9UGU0-2|TCF20	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.2945861816406	2	491.319443	980.624333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.078	1	59.078	58.578	59.578	0								0	0	0	0.29498	1	5133	5133		26.796	2.5934	1				54400	1808	36281	36296	61634	61634					0.1332456790788683
SKVKYFVR	8	Unmodified	_SKVKYFVR_					0	0	0			REV__ENSG00000156030|ENST00000423556|MIDEAS	REV__ENSG00000156030|ENST00000423556|MIDEAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8080444335938	2	513.808377	1025.6022	-0.038079	-1.9565E-05	1.3781	0.00070808	1.34	0.00068852	513.8090107774265	57.263	2.0786	57.251	56.87	58.948	-0.012203					104	72	2	0	0	0	0.81184	1	5168	5168		19.997	0	1	172740	+		54401	20463	36282	36297	61635	61635					0.0904234343945518
SKVLTNKKTT	10	Unmodified	_SKVLTNKKTT_					0	0	0		nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3372802734375	2	560.340238	1118.66592	-0.39995	-0.00022411	0.78582	0.00044033	0.38587	0.00021622	560.3405930635428	105.99	1.5593	105.99	105.37	106.93	0					97	35	4	0	0	0	0.86047	2	10991	10991;11007		30.318	3.6248	1	744480			54402	14986	36283	36298	61636;61637	61636					0.11133659085885483
SKVLTNKKTT	10	Unmodified	_SKVLTNKKTT_					0	0	0		nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3409423828125	2	560.340238	1118.66592	3.1376	0.0017581	-3.3476	-0.0018758	-0.20995	-0.00011764	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.86698	1	11367	11367		28.081	0.19925	1	83033000			54403	14986	36283	36298	61638	61638					0.11133659085885483
SKVLTNKKTT	10	Unmodified	_SKVLTNKKTT_					0	0	0		nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3408203125	2	560.340238	1118.66592	1.387	0.00077719	-1.5597	-0.00087396	-0.1727	-9.677E-05	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.86047	1	11251	11251		23.523	0.48021	1	81463000			54404	14986	36283	36298	61639	61639					0.11133659085885483
SKVLTNKKTT	10	Unmodified	_SKVLTNKKTT_					0	0	0		nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3401489257812	2	560.340238	1118.66592	1.3859	0.00077659	-0.96174	-0.0005389	0.4242	0.00023769	560.3395943514043	105.68	1.8194	105.72	105.08	106.9	0.03833					99	42	3	0	0	0	0.86471	1	11468	11468		30.318	2.2362	1	928560			54405	14986	36283	36298	61640	61640					0.11133659085885483
SKVLTNKKTT	10	Unmodified	_SKVLTNKKTT_					0	0	0		nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8417358398438	2	560.340238	1118.66592	1.383	0.00077498	-1.2017	-0.00067337	0.18133	0.00010161	560.3394720232257	112.84	1.5011	112.87	112.76	114.26	0.028854					65	39	2	0	0	0	0.8505	1	12417	12417		19.104	0.77911	1	665690			54406	14986	36283	36298	61641	61641					0.11133659085885483
SKVLTNKKTT	10	Unmodified	_SKVLTNKKTT_					0	0	0		nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3399047851562	2	560.340238	1118.66592	0.39664	0.00022225	0.11242	6.2992E-05	0.50906	0.00028524	560.3401597045467	105.5	0.96318	105.66	104.96	105.92	0.15924					88	24	4	0	0	0	0.85981	1	11272	11272		35.152	2.3396	1	1617200			54407	14986	36283	36298	61642	61642					0.11133659085885483
SKVLTNKKTT	10	Unmodified	_SKVLTNKKTT_					0	0	0		nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.340576171875	2	560.340238	1118.66592	0.86176	0.00048288	-1.0266	-0.00057525	-0.16485	-9.237E-05	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.85981	2	10948	10948;10984		35.152	3.6222	1	126390000			54408	14986	36283	36298	61643;61644	61643					0.11133659085885483
SKVLTNKKTT	10	Unmodified	_SKVLTNKKTT_					0	0	0		nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3401489257812	2	560.340238	1118.66592	0.86184	0.00048292	-0.47882	-0.0002683	0.38302	0.00021462	560.3398879742181	105.87	1.7587	105.97	104.89	106.65	0.099007					143	43	5	0	0	0	0.85981	1	11288	11288		35.152	2.3396	1	1773300			54409	14986	36283	36298	61645	61645					0.11133659085885483
SKVLTNKKTT	10	Unmodified	_SKVLTNKKTT_					0	0	0		nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3395385742188	2	560.340238	1118.66592	-1.4185	-0.00079484	1.6592	0.00092972	0.24069	0.00013487	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.85259	2	12832	12407;12832		28.081	3.5623	1	4071000			54410	14986	36283	36298	61646;61647	61647					0.11133659085885483
SKVLTNKKTT	10	Unmodified	_SKVLTNKKTT_					0	0	0		nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	nc|ENSG00000148834|P78417-2|GSTO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3407592773438	2	560.340238	1118.66592	2.2618	0.0012674	-2.2882	-0.0012822	-0.026429	-1.4809E-05	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.86047	1	12453	12453		23.523	1.5628	1	14759000			54411	14986	36283	36298	61648	61648					0.11133659085885483
SKVRPEPSK	9	Unmodified	_SKVRPEPSK_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.2982788085938	2	514.298373	1026.58219	0.73156	0.00037624	-1.0406	-0.00053517	-0.30902	-0.00015893	514.2979640556221	96.413	1.8767	96.461	95.25	97.127	0.047798					96	43	4	0	0	0	0.7932	1	10256	10256		23.523	0.94304	1	532700	+		54412	20437;29946	36284	36299	61649	61649					0.06996547708831713
SKVSKTKP	8	Unmodified	_SKVSKTKP_					0	0	0			REV__nc|ENSG00000163754|P46976-2|GYG1	REV__nc|ENSG00000163754|P46976-2|GYG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7712707519531	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.81184	1	2309	2309		19.997	1.7347	1	1151500	+		54413	20966	36285	36300	61650	61650					0.0865437527713766
SKVSKTKP	8	Unmodified	_SKVSKTKP_					0	0	0			REV__nc|ENSG00000163754|P46976-2|GYG1	REV__nc|ENSG00000163754|P46976-2|GYG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.77099609375	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.8537	1	2296	2296		25.574	4.6271	1	1041500	+		54414	20966	36285	36300	61651	61651					0.0865437527713766
SKVSLSNV	8	Unmodified	_SKVSLSNV_					0	0	0			REV__nc|ENSG00000179456|Q99592|ZBTB18	REV__nc|ENSG00000179456|Q99592|ZBTB18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2398376464844	2	417.239993	832.465432	1.1488	0.00047933	-3.1805	-0.001327	-2.0317	-0.00084772	417.2384906610176	88.485	2.0585	88.411	87.855	89.913	-0.074005					110	48	3	0	0	0	0.86677	1	9235	9235		27.882	1.1893	1	1559000	+		54415	22338	36286	36301	61652	61652					0.04249809489101608
SKWDVSSVY	9	Unmodified	_SKWDVSSVY_					0	0	0		ENSG00000118308|ENST00000556887|IRAG2;nc|ENSG00000118308|Q12912|IRAG2	ENSG00000118308|ENST00000556887|IRAG2	ENSG00000118308|ENST00000556887|IRAG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.7603149414062	2	535.761289	1069.50803	-0.089312	-4.785E-05	0.25689	0.00013763	0.16758	8.9782E-05	535.7612767293743	79.907	0.58101	79.966	79.727	80.308	0.059349					29	20	2	0	0	0	0.62081	1	7823	7823		45.952	1.8352	1	95184			54416	3022	36287	36302	61653	61653					-0.023948401733150604
SKWRLCFKMKA	11	Unmodified	_SKWRLCFKMKA_					0	0	0			REV__nc|ENSG00000165688|Q10713-2|PMPCA	REV__nc|ENSG00000165688|Q10713-2|PMPCA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.9246520996094	3	466.589665	1396.74717	0.051039	2.3814E-05	-0.59793	-0.00027899	-0.54689	-0.00025517	466.5893455631255	55.718	0.63055	56.277	55.941	56.572	0.55954					39	16	4	0	0	0	0.68431	1	5772	5772		34.087	7.3368	1	1606400	+		54417	30001	36288	36303	61654	61654					0.06466320252616242
SKYAKTVVRR	10	Unmodified	_SKYAKTVVRR_					0	0	0			REV__chr1:151185608-151185798|14|22.71|0.74|4.93|-|0|None,VPS72|1	REV__chr1:151185608-151185798|14|22.71|0.74|4.93|-|0|None,VPS72|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3668823242188	2	604.367121	1206.71969	3.2045	0.0019367	-4.3338	-0.0026192	-1.1294	-0.00068255	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.8651	1	11704	11704		25.574	0	1	63446000	+		54418	15414	36289	36304	61655	61655					0.12459876308253115
SKYAKTVVRR	10	Unmodified	_SKYAKTVVRR_					0	0	0			REV__chr1:151185608-151185798|14|22.71|0.74|4.93|-|0|None,VPS72|1	REV__chr1:151185608-151185798|14|22.71|0.74|4.93|-|0|None,VPS72|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3668823242188	2	604.367121	1206.71969	1.0484	0.00063359	-2.1061	-0.0012728	-1.0577	-0.00063923	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.86348	1	11325	11325		31.53	3.4483	1	105850000	+		54419	15414	36289	36304	61656	61656					0.12459876308253115
SKYFCCFY	8	2 Carbamidomethyl (C)	_SKYFC(Carbamidomethyl (C))C(Carbamidomethyl (C))FY_	SKYFC(1)C(1)FY		SKYFC(50)C(50)FY		0	2	0			REV__ENST00000393085.3_1_7:135613509-135613572:-|nuORF	REV__ENST00000393085.3_1_7:135613509-135613572:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	587.7404174804688	2	587.738445	1173.46234	0.22118	0.00013	-2.412	-0.0014176	-2.1908	-0.0012876	587.7374515912343	25.737	0.78595	25.696	25.265	26.05	-0.04117					31	21	2	0	0	0	0.92973	1	1133	1133		50.025	9.4519	1	39433	+		54420	26044	36290	36305	61657	61657	317;318				-0.1174552495158423
SKYFCCFY	8	2 Carbamidomethyl (C)	_SKYFC(Carbamidomethyl (C))C(Carbamidomethyl (C))FY_					0	2	0			REV__ENST00000393085.3_1_7:135613509-135613572:-|nuORF	REV__ENST00000393085.3_1_7:135613509-135613572:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	587.738445	1173.46234	0.22118	0.00013	-2.412	-0.0014176	-2.1908	-0.0012876	587.7374515912343	25.737	0.78595	25.696	25.265	26.05	-0.04117	-0.044287	-0.00022454	NaN	50.025	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39433	+		54421	26044	36290	36305			317;318				-0.1174552495158423
SKYFCCFY	8	2 Carbamidomethyl (C)	_SKYFC(Carbamidomethyl (C))C(Carbamidomethyl (C))FY_					0	2	0			REV__ENST00000393085.3_1_7:135613509-135613572:-|nuORF	REV__ENST00000393085.3_1_7:135613509-135613572:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	587.738445	1173.46234	-0.82686	-0.00048598	-1.7617	-0.0010354	-2.5885	-0.0015214	587.7380738721837	25.816	0.6232	25.784	25.398	26.021	-0.032127	0.044287	0.00053989	NaN	50.025	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38876	+		54422	26044	36290	36305			317;318				-0.1174552495158423
SKYSLVHKKK	10	Unmodified	_SKYSLVHKKK_					0	0	0			REV__ENSG00000256870|ENST00000536262|SLC5A8	REV__ENSG00000256870|ENST00000536262|SLC5A8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.58416748046875	3	406.583674	1216.72919	-1.927	-0.00078348	2.7576	0.0011212	0.83063	0.00033772	406.58477414221215	112.11	0.72639	112.09	111.83	112.55	-0.01989					36	23	2	0	0	0	0.86014	1	11946	11946		23.378	0.81632	1	4313100	+		54423	23912	36291	36306	61658	61658					0.1294964459377752
SKYSLVHKKK	10	Unmodified	_SKYSLVHKKK_					0	0	0			REV__ENSG00000256870|ENST00000536262|SLC5A8	REV__ENSG00000256870|ENST00000536262|SLC5A8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.91802978515625	3	406.583674	1216.72919	3.1308	0.0012729	-2.164	-0.00087985	0.96679	0.00039308	406.5827071519945	112.24	0.82966	112.27	112.06	112.89	0.030602					58	32	2	0	0	0	0.86207	1	13636	13636		24.232	4.2013	1	1459000	+		54424	23912	36291	36306	61659	61659					0.1294964459377752
SLAAIVLELA	10	Unmodified	_SLAAIVLELA_					0	0	0			REV__ENSG00000170425|ENST00000304222|ADORA2B	REV__ENSG00000170425|ENST00000304222|ADORA2B	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.30694580078125	2	500.307875	998.601197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.295	1	94.494	93.994	94.994	0.19827								0	0	0	0.45132	1	9570	9570		27.882	1.1893	1		+		54425	21659	36292	36307	61660	61660					0.10184084279876515
SLAEILLKK	9	Unmodified	_SLAEILLKK_					0	0	0		nc|ENSG00000133704|O15397-2|IPO8;ENSG00000133704|ENST00000256079|IPO8;ENSG00000205339|ENST00000379719|IPO7	nc|ENSG00000133704|O15397-2|IPO8;ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.8307189941406	2	507.831517	1013.64848	0.028124	1.4282E-05	0.0067282	3.4168E-06	0.034852	1.7699E-05	507.8314175983493	53.061	0.82384	53.475	53.128	53.951	0.4139					44	19	3	0	0	0	0.096131	2	5351	5340;5351		93.195	34.414	1	1440600			54426	3889;8526	36293	36308	61661;61662	61662					0.14220363550907678
SLAEILLKK	9	Unmodified	_SLAEILLKK_					0	0	0		nc|ENSG00000133704|O15397-2|IPO8;ENSG00000133704|ENST00000256079|IPO8;ENSG00000205339|ENST00000379719|IPO7	nc|ENSG00000133704|O15397-2|IPO8;ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.8309020996094	2	507.831517	1013.64848	0.65321	0.00033172	-0.69475	-0.00035282	-0.041538	-2.1094E-05	507.8310122618895	52.848	0.78624	53.462	53.158	53.944	0.61436					42	18	3	0	0	0	0.059135	2	5329	5320;5329		104.06	23.489	1	1679100			54427	3889;8526	36293	36308	61663;61664	61664					0.14220363550907678
SLAEPNPCE	9	Carbamidomethyl (C)	_SLAEPNPC(Carbamidomethyl (C))E_	SLAEPNPC(1)E		SLAEPNPC(57)E		0	1	0			REV__ENSG00000137766|ENST00000260323|UNC13C	REV__ENSG00000137766|ENST00000260323|UNC13C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.71929931640625	2	508.721307	1015.42806	-0.26491	-0.00013476	-3.1309	-0.0015928	-3.3958	-0.0017275	508.71957936194843	34.017	0.47836	33.961	33.651	34.13	-0.056385					22	10	3	0	0	0	0.41566	1	2112	2112		56.721	8.8055	1	76706	+		54428	19405	36294	36309	61665	61665	246				-0.07903649838829097
SLAIELPTGCL	11	Unmodified	_SLAIELPTGCL_					0	0	0			REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|43|2|sense	REV__HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|43|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.8035278320312	2	558.8021	1115.58965	-0.32318	-0.00018059	3.5388	0.0019775	3.2156	0.0017969	558.8038892213029	49.437	0.66257	49.413	49.058	49.721	-0.024029					32	14	3	0	0	0	0.64498	1	4231	4231		39.253	1.4413	1	316600	+		54429	29436	36295	36310	61666	61666					0.03647519194259985
SLAKHSKT	8	Unmodified	_SLAKHSKT_					0	0	0			REV__nc|ENSG00000021461|Q9HB55-6|CYP3A43	REV__nc|ENSG00000021461|Q9HB55-6|CYP3A43	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.25445556640625	2	436.253434	870.492316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.04	1	110.09	109.59	110.59	0.054062								0	0	0	0.30814	1	13317	13317		45.972	5.3996	1		+		54430	16240	36296	36311	61667	61667					0.051889181002820806
SLAKMVKP	8	Unmodified	_SLAKMVKP_					0	0	0		AluSz_dup41362|chr7:130512498-130512758:+|1.8722326896374464|0.1458178941185087|3.68|62.0|10|3|sense;AluSx_dup30022|chr5:14515214-14515541:-|2.928452429573868|0.0062677388586443|8.87|63.0|10|3|sense	AluSz_dup41362|chr7:130512498-130512758:+|1.8722326896374464|0.1458178941185087|3.68|62.0|10|3|sense	AluSz_dup41362|chr7:130512498-130512758:+|1.8722326896374464|0.1458178941185087|3.68|62.0|10|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2669372558594	2	437.264956	872.515359	-0.37471	-0.00016385	2.1781	0.00095241	1.8034	0.00078857	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.82658	1	737	737		21.96	3.6355	1	970200			54431	9	36297	36312	61668	61668					0.0740022089340755
SLALLCQW	8	Unmodified	_SLALLCQW_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.2590026855469	2	467.246763	932.478974	0.22591	0.00010555	-4.3728	-0.0020432	-4.1469	-0.0019376	467.2444139480014	32.132	0.85889	32.239	31.76	32.619	0.10707					39	19	3	0	0	0	0.4196	1	2272	2272		33.516	0	1	207910			54432	5702	36298	36313	61669	61669					0.010033439966832702
SLALPLALA	9	Unmodified	_SLALPLALA_					0	0	0		ENSG00000196123|ENST00000563902|MATCAP1;nc|ENSG00000196123|Q68EN5-2|MATCAP1	ENSG00000196123|ENST00000563902|MATCAP1	ENSG00000196123|ENST00000563902|MATCAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801513671875	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.7932	1	3303	3303		19.36	0	1	17256000			54433	8013	36299	36314	61670	61670					0.10388447425282266
SLALVLLLPL	10	Unmodified	_SLALVLLLPL_					0	0	0			REV__ENSG00000164171|ENST00000296585|ITGA2	REV__ENSG00000164171|ENST00000296585|ITGA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3611450195312	2	526.359911	1050.70527	-0.47346	-0.00024921	2.7476	0.0014462	2.2741	0.001197	526.3612126681783	35.14	1.5704	35.146	34.727	36.297	0.0063934					147	36	5	0	0	0	0.84874	1	2244	2244		18.324	0	1	2682400	+		54434	21045	36300	36315	61671	61671					0.18194411107424457
SLALVNIN	8	Unmodified	_SLALVNIN_					0	0	0		ENSG00000214102|ENST00000397541|WEE2	ENSG00000214102|ENST00000397541|WEE2	ENSG00000214102|ENST00000397541|WEE2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75128173828125	2	422.25036	842.486168	2.1644	0.00091391	3.8855	0.0016407	6.0499	0.0025546	422.25198423121327	76.693	1.407	76.741	75.425	76.832	0.047974					78	46	2	0	0	0	0.4196	1	7435	7435		29.15	0	1	278630			54435	8618	36301	36316	61672	61672					0.05862399868749435
SLAMKKIS	8	Unmodified	_SLAMKKIS_					0	0	0		ENSG00000232040|ENST00000452236|SCAND3	ENSG00000232040|ENST00000452236|SCAND3	ENSG00000232040|ENST00000452236|SCAND3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	439.2641296386719	2	439.262413	876.510274	0.73972	0.00032493	1.7447	0.00076638	2.4844	0.0010913	439.26303385245035	111.83	0.49524	111.9	111.59	112.09	0.069542					21	14	2	0	0	0	0.90465	1	12035	12035		40.573	7.057	1	217980			54436	8737	36302	36317	61673	61673					0.06707917030780663
SLAPGFKGF	9	Unmodified	_SLAPGFKGF_					0	0	0			REV__nc|ENSG00000070756|P11940-2|PABPC1	REV__nc|ENSG00000070756|P11940-2|PABPC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.26483154296875	2	462.252903	922.491253	-1.0707	-0.00049492	1.4814	0.00068476	0.41069	0.00018984	462.2535115607458	92.913	0.99192	93.138	92.747	93.739	0.22548					36	23	2	0	0	0	0.20789	1	9428	9428		21.96	4.5949	1	182730	+		54437	16611	36303	36318	61674	61674					0.026907037313776527
SLAPGLYTSA	10	Unmodified	_SLAPGLYTSA_					0	0	0			REV__nc|ENSG00000105737|Q16478-2|GRIK5	REV__nc|ENSG00000105737|Q16478-2|GRIK5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	490.25897216796875	2	490.258382	978.502212	-0.76861	-0.00037682	0.064733	3.1736E-05	-0.70387	-0.00034508	490.2582311851216	107.58	0.88774	107.58	106.84	107.73	0					59	20	4	0	0	0	0.74274	1	11199	11199		42.396	8.2236	1	787300	+		54438	17566	36304	36319	61675	61675					0.012100613149982564
SLAPLHLAGH	10	Unmodified	_SLAPLHLAGH_					0	0	0			REV__ENST00000528758.1_1_11:7507087-7531416:+|nuORF	REV__ENST00000528758.1_1_11:7507087-7531416:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.27337646484375	2	508.287808	1014.56106	1.2922	0.0006568	-0.97182	-0.00049396	0.32036	0.00016284	508.78952212387446	31.915	0.38698	32.022	31.802	32.189	0.10707					9	8	2	0	0	0	0.37624	1	2201	2201		31.955	13.693	1	45201	+		54439	28254	36305	36320	61676	61676					0.05436582400000134
SLAPRLALPFK	11	Unmodified	_SLAPRLALPFK_					0	0	0		ENST00000440737.5_3_3:18486258-18486357:-|nuORF	ENST00000440737.5_3_3:18486258-18486357:-|nuORF	ENST00000440737.5_3_3:18486258-18486357:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.9225158691406	3	404.920286	1211.73903	2.788	0.0011289	3.7066	0.0015009	6.4947	0.0026298	404.92169157251993	26.492	2.181	26.459	26.021	28.202	-0.032125					96	52	4	0	0	0	0.74771	1	1196	1196		22.562	3.2989	1	297020			54440	11776	36306	36321	61677	61677					0.1416283259914053
SLARCSIVN	9	Unmodified	_SLARCSIVN_					0	0	0		ENST00000496538.1_1_1:156693891-156697171:-|nuORF;ENSG00000143319|ENST00000368219|ISG20L2	ENST00000496538.1_1_1:156693891-156697171:-|nuORF	ENST00000496538.1_1_1:156693891-156697171:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.7561340332031	2	481.758027	961.5015	-0.84661	-0.00040786	-1.2336	-0.0005943	-2.0802	-0.0010022	481.7567676793475	57.439	0.74512	57.519	57.249	57.994	0.079643					68	38	3	0	0	0	0.77696	1	4865	4865		31.53	4.8369	1	328760			54441	4617	36307	36322	61678	61678					0.019209433943160548
SLARGVRILD	10	Unmodified	_SLARGVRILD_					0	0	0			REV__ENSG00000186185|ENST00000593135|KIF18B	REV__ENSG00000186185|ENST00000593135|KIF18B	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.3358764648438	2	550.332747	1098.65094	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.99	1	116.91	116.41	117.41	-0.082458								0	0	0	0.45132	1	12580	12580		28.081	1.3886	1		+		54442	22830	36308	36323	61679	61679					0.10556212008555121
SLARKASKSA	10	Unmodified	_SLARKASKSA_					0	0	0			REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8037414550781	2	509.803823	1017.59309	0.9788	0.00049899	-1.2019	-0.00061275	-0.22313	-0.00011375	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.78666	3	8580	8580;8592;8604		40.058	10.217	1	979740	+		54443	23198	36309	36324	61680;61681;61682	61680					0.08499950083137264
SLARKASKSA	10	Unmodified	_SLARKASKSA_					0	0	0			REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8038330078125	2	509.803823	1017.59309	0.075306	3.8391E-05	-0.26655	-0.00013589	-0.19124	-9.7495E-05	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.8545	2	8449	8449;8472		36.447	2.2742	1	958280	+		54444	23198	36309	36324	61683;61684	61683					0.08499950083137264
SLARKASKSA	10	Unmodified	_SLARKASKSA_					0	0	0			REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.80364990234375	2	509.803823	1017.59309	-1.4574	-0.000743	1.1751	0.00059908	-0.2823	-0.00014392	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.80179	1	8238	8238		39.253	11.371	1	920080	+		54445	23198	36309	36324	61685	61685					0.08499950083137264
SLARKASKSA	10	Unmodified	_SLARKASKSA_					0	0	0			REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8038330078125	2	509.803823	1017.59309	0.31699	0.0001616	-0.53209	-0.00027126	-0.2151	-0.00010966	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.86471	1	10131	10131		30.318	2.4355	1	2635100	+		54446	23198	36309	36324	61686	61686					0.08499950083137264
SLARLGRPG	9	Unmodified	_SLARLGRPG_					0	0	0		ENST00000313349.3_1_2:64861661-64861808:-|nuORF	ENST00000313349.3_1_2:64861661-64861808:-|nuORF	ENST00000313349.3_1_2:64861661-64861808:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.77960205078125	2	463.780151	925.545748	-1.147	-0.00053196	-1.1857	-0.00054989	-2.3327	-0.0010818	463.7795203581368	39.498	0.37845	39.506	39.297	39.676	0.007618					15	9	2	0	0	0	0.77244	1	2443	2443		32.812	2.3088	1	213380			54447	9949	36310	36325	61687	61687					0.079997156028071
SLASAEPVDP	10	Unmodified	_SLASAEPVDP_					0	0	0			REV__nc|ENSG00000173809|Q587J7|TDRD12	REV__nc|ENSG00000173809|Q587J7|TDRD12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.2466125488281	2	493.245472	984.476391	-0.22235	-0.00010967	1.4183	0.00069959	1.196	0.00058992	493.2460736786689	27.772	1.7235	27.734	27.305	29.029	-0.038523					102	45	4	0	0	0	0.3985	1	1422	1422		64.207	0.901	1	1093300	+		54448	15695	36311	36326	61688	61688					-0.01646832927281139
SLAVRRPT	8	Unmodified	_SLAVRRPT_					0	0	0		ENST00000591433.5_1_19:1358605-1371443:+|nuORF	ENST00000591433.5_1_19:1358605-1371443:+|nuORF	ENST00000591433.5_1_19:1358605-1371443:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2746276855469	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.91977	1	11049	11049		45.952	1.8352	1	19085000			54449	14272	36312	36327	61689	61689					0.08152313228526964
SLAVSTKRDL	10	Unmodified	_SLAVSTKRDL_					0	0	0			REV__ENST00000467530.5_1_1:85960795-85960843:-|nuORF	REV__ENST00000467530.5_1_1:85960795-85960843:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3170776367188	2	545.316763	1088.61897	1.1684	0.00063715	-1.2999	-0.00070886	-0.1315	-7.1708E-05	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.73395	1	8911	8911		42.864	0.46813	1	4705800	+		54450	27159	36313	36328	61690	61690					0.07820799534783873
SLAVVVIYLI	10	Unmodified	_SLAVVVIYLI_					0	0	0		ENSG00000019169|ENST00000327097|MARCO	ENSG00000019169|ENST00000327097|MARCO	ENSG00000019169|ENST00000327097|MARCO	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.31689453125	2	545.349543	1088.68453	0.153	8.3439E-05	-1.8982	-0.0010352	-1.7452	-0.00095174	545.3494557006484	90.201	0.33672	90.413	90.169	90.505	0.21271					10	7	2	0	0	0	0.37624	1	9034	9034		27.882	0	1	70460			54451	837	36314	36329	61691	61691					0.14373820727746534
SLCPDAEH	8	Unmodified	_SLCPDAEH_					0	0	0			REV__ENSG00000074181|ENST00000263388|NOTCH3	REV__ENSG00000074181|ENST00000263388|NOTCH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.18646240234375	2	436.18436	870.354167	1.2429	0.00054211	2.5665	0.0011195	3.8094	0.0016616	436.1857223353316	96.963	1.8497	97.368	96.928	98.777	0.40498					75	44	3	0	0	0	0.91005	1	11648	11648		42.474	0.078325	1	1011400	+		54452	16686	36315	36330	61692	61692					-0.0861957321050113
SLCPDAEH	8	Unmodified	_SLCPDAEH_					0	0	0			REV__ENSG00000074181|ENST00000263388|NOTCH3	REV__ENSG00000074181|ENST00000263388|NOTCH3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	436.18436	870.354167	2.1917	0.00095596	2.3855	0.0010405	4.5772	0.0019965	436.18545207063903	97.453	0.5359	97.501	97.043	97.579	0.048157	0.068062	-0.00042677	NaN	42.474	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34572	+		54453	16686	36315	36330							-0.0861957321050113
SLCRRRSLWEL	11	Unmodified	_SLCRRRSLWEL_					0	0	0			REV__ENST00000561435.5_1_14:24606983-24607423:+|nuORF	REV__ENST00000561435.5_1_14:24606983-24607423:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.9302673339844	3	473.594355	1417.76124	-0.4023	-0.00019053	3.0686	0.0014533	2.6663	0.0012627	473.59591526473343	21.498	0.24774	21.434	21.287	21.535	-0.064058					15	9	2	0	0	0	0.17784	1	604	604		17.167	0	1	47886	+		54454	28782	36316	36331	61693	61693					0.069066890052909
SLCVTQRYLQ	10	Carbamidomethyl (C)	_SLC(Carbamidomethyl (C))VTQRYLQ_	SLC(1)VTQRYLQ		SLC(74)VTQRYLQ		0	1	0			REV__nc|ENSG00000143199|Q96PN6-3|ADCY10	REV__nc|ENSG00000143199|Q96PN6-3|ADCY10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3255004882812	2	634.326805	1266.63906	1.4146	0.00089732	-3.7436	-0.0023746	-2.329	-0.0014773	634.3243337496912	59.344	1.2629	59.438	58.987	60.25	0.094063					106	40	4	0	0	0	0.28217	1	5088	5088		74.255	7.8258	1	2187100	+		54455	19782	36317	36332	61694	61694	249				0.01640227203051836
SLDAYKSKYW	10	Unmodified	_SLDAYKSKYW_					0	0	0			REV__chr12:49295542-49295639|38|127.71|0.29|8.78|+|ENST00000451891|PRPH,PRPH	REV__chr12:49295542-49295639|38|127.71|0.29|8.78|+|ENST00000451891|PRPH,PRPH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	630.8193969726562	2	630.816596	1259.61864	-0.18345	-0.00011572	2.3331	0.0014718	2.1496	0.001356	630.8184918587338	64.221	0.48055	64.22	63.924	64.404	-0.00078583					25	14	2	0	0	0	0.67571	1	5989	5989		45.972	3.5761	1	118810	+		54456	15536	36318	36333	61695	61695					-0.0007862018510422786
SLDDWQTHY	9	Unmodified	_SLDDWQTHY_					0	0	0		ENSG00000154415|ENST00000284601|PPP1R3A	ENSG00000154415|ENST00000284601|PPP1R3A	ENSG00000154415|ENST00000284601|PPP1R3A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.2572021484375	2	582.751453	1163.48835	0.90514	0.00052747	-3.899	-0.0022721	-2.9939	-0.0017447	582.748900212159	24.704	0.37356	24.718	24.553	24.926	0.013994					26	18	2	0	0	0	0.20789	1	857	857		26.693	0	1	53891			54457	5276	36319	36334	61696	61696					-0.0868521618408522
SLDISVWDY	9	Unmodified	_SLDISVWDY_					0	0	0		ENST00000549913.6_1_12:113307544-113334582:+|nuORF;nc|ENSG00000089169|Q9Y2J0-2|RPH3A;chr12:112828389-112847696|15|13.47|0.21|5.99|+|ENST00000551052|RPH3A,RPH3A;ENSG00000089169|ENST00000389385|RPH3A	ENST00000549913.6_1_12:113307544-113334582:+|nuORF	ENST00000549913.6_1_12:113307544-113334582:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.2571411132812	2	549.261122	1096.50769	-0.90614	-0.00049771	-3.4957	-0.00192	-4.4018	-0.0024177	549.2591655862798	39.958	0.55033	39.968	39.687	40.237	0.0092812					27	12	3	0	0	0	0.43338	1	2853	2853		55.504	4.3115	1	136560			54458	112	36320	36335	61697	61697					-0.03670259893192451
SLDKFLASVST	11	Unmodified	_SLDKFLASVST_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.3169555664062	2	584.316428	1166.6183	-1.3681	-0.00079938	1.5538	0.00090792	0.18577	0.00010855	584.3174338604485	68.742	0.43665	68.775	68.537	68.974	0.033005					27	15	2	0	0	0	0.638	1	6559	6559		40.058	2.2467	1	94400			54459	7934	36321	36336	61698	61698					0.04165960095042465
SLDKFLASVST	11	Unmodified	_SLDKFLASVST_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	584.316428	1166.6183	-0.80108	-0.00046808	1.2785	0.00074704	0.47741	0.00027896	584.3170549122062	68.896	0.53329	68.922	68.602	69.136	0.02636	0.11109	0.00010283	NaN	40.058	29	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110310			54460	7934	36321	36336							0.04165960095042465
SLDLGHPQLVQ	11	Unmodified	_SLDLGHPQLVQ_					0	0	0		ENST00000563671.5_1_15:75192477-75194403:-|nuORF;ENST00000566132.5_1_15:75192466-75194403:-|nuORF	ENST00000563671.5_1_15:75192477-75194403:-|nuORF	ENST00000563671.5_1_15:75192477-75194403:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	603.8275146484375	2	603.827495	1205.64044	-1.5959	-0.00096368	-0.13483	-8.1411E-05	-1.7308	-0.0010451	603.8273461712822	43.894	0.46099	43.892	43.67	44.131	-0.002449					19	11	2	0	0	0	0.61369	1	3403	3403		42.864	2.8061	1	136740			54461	13874	36322	36337	61699	61699					0.04584184563464078
SLDPPGANNL	10	Unmodified	_SLDPPGANNL_					0	0	0			REV__ENSG00000183960|ENST00000328405|KCNH8	REV__ENSG00000183960|ENST00000328405|KCNH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.2508239746094	2	499.251089	996.487624	-0.38514	-0.00019228	0.095771	4.7814E-05	-0.28937	-0.00014447	499.25094387259577	54.437	0.79847	55.022	54.749	55.548	0.58474					32	18	3	0	0	0	0.21786	1	5560	5560		82.241	8.2658	1	986120	+		54462	22638	36323	36338	61700	61700					-0.01076010833151031
SLDPSRRP	8	Unmodified	_SLDPSRRP_					0	0	0		nc|ENSG00000125503|Q9BZL4-5|PPP1R12C;nc|ENSG00000125503|Q9BZL4-3|PPP1R12C;nc|ENSG00000125503|Q9BZL4-4|PPP1R12C;ENSG00000125503|ENST00000263433|PPP1R12C	nc|ENSG00000125503|Q9BZL4-5|PPP1R12C	nc|ENSG00000125503|Q9BZL4-5|PPP1R12C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.255615234375	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.90523	1	8323	8323		40.778	3.6191	1	1324500			54463	3394	36324	36339	61701	61701					0.027191324691898444
SLDVGGPLRY	10	Unmodified	_SLDVGGPLRY_					0	0	0		ENSG00000176894|ENST00000317479|PXMP2	ENSG00000176894|ENST00000317479|PXMP2	ENSG00000176894|ENST00000317479|PXMP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.7893676757812	2	538.790381	1075.56621	-0.16933	-9.1234E-05	-1.9077	-0.0010279	-2.077	-0.0011191	538.790040991657	60.05	0.5653	60.036	59.753	60.318	-0.013733					25	14	2	0	0	0	0.70553	1	5543	5543		44.377	6.5657	1	124950			54464	7101	36325	36340	61702	61702					0.03144841471953441
SLDVGGPLRY	10	Unmodified	_SLDVGGPLRY_					0	0	0		ENSG00000176894|ENST00000317479|PXMP2	ENSG00000176894|ENST00000317479|PXMP2	ENSG00000176894|ENST00000317479|PXMP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.7909545898438	2	538.790381	1075.56621	0.95921	0.00051681	-2.3187	-0.0012493	-1.3594	-0.00073245	538.78944735069	59.898	0.5224	59.866	59.653	60.175	-0.031727					18	13	2	0	0	0	0.18173	2	5647	5622;5647		90.37	29.398	1	174520			54465	7101	36325	36340	61703;61704	61704					0.03144841471953441
SLDVGGPLRY	10	Unmodified	_SLDVGGPLRY_					0	0	0		ENSG00000176894|ENST00000317479|PXMP2	ENSG00000176894|ENST00000317479|PXMP2	ENSG00000176894|ENST00000317479|PXMP2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.7930297851562	2	538.790381	1075.56621	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.92	1	60.014	59.514	60.514	0.094059								0	0	0	0.45132	1	5157	5157		52.937	6.9645	1				54466	7101	36325	36340	61705	61705					0.03144841471953441
SLDVGGPLRY	10	Unmodified	_SLDVGGPLRY_					0	0	0		ENSG00000176894|ENST00000317479|PXMP2	ENSG00000176894|ENST00000317479|PXMP2	ENSG00000176894|ENST00000317479|PXMP2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.7882690429688	2	538.790381	1075.56621	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.913	1	59.914	59.414	60.414	0.00051117								0	0	0	0.45132	1	5165	5165		60.118	17.722	1				54467	7101	36325	36340	61706	61706					0.03144841471953441
SLDVGGPLRY	10	Unmodified	_SLDVGGPLRY_					0	0	0		ENSG00000176894|ENST00000317479|PXMP2	ENSG00000176894|ENST00000317479|PXMP2	ENSG00000176894|ENST00000317479|PXMP2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	538.790381	1075.56621	-0.57447	-0.00030952	-2.0785	-0.0011199	-2.653	-0.0014294	538.7903508570445	59.886	0.57538	59.919	59.603	60.178	0.032825	-0.017551	0.00014207	NaN	90.37	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140200			54468	7101	36325	36340							0.03144841471953441
SLDVYRKLI	9	Unmodified	_SLDVYRKLI_					0	0	0		ENST00000553986.1_1_14:60616802-60619887:-|nuORF;nc|ENSG00000100612|Q9Y394-2|DHRS7;ENSG00000100612|ENST00000557185|DHRS7;ENST00000556502.1_1_14:60619584-60632027:-|nuORF	ENST00000553986.1_1_14:60616802-60619887:-|nuORF;ENST00000556502.1_1_14:60619584-60632027:-|nuORF	ENST00000556502.1_1_14:60619584-60632027:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8301391601562	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.76764	1	8577	8577		34.173	5.023	1	1181400			54469	13714;13749	36326	36341	61707	61707					0.10094577919812764
SLDWMKATKD	10	Unmodified	_SLDWMKATKD_					0	0	0			REV__ENSG00000101146|ENST00000395841|RAE1	REV__ENSG00000101146|ENST00000395841|RAE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.7700805664062	2	597.794806	1193.57506	0.27439	0.00016403	-2.7646	-0.0016527	-2.4902	-0.0014886	597.7922714828383	56.314	0.26256	56.874	56.703	56.965	0.55954					7	5	2	0	0	0	0.37624	1	5822	5822		24.519	2.8334	1	173440	+		54470	17244	36327	36342	61708	61708					-0.013985529539013442
SLEAKNRALN	10	Unmodified	_SLEAKNRALN_					0	0	0		ENSG00000080986|ENST00000261597|NDC80	ENSG00000080986|ENST00000261597|NDC80	ENSG00000080986|ENST00000261597|NDC80	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	558.3128662109375	2	558.312012	1114.60947	0.26816	0.00014972	-0.32529	-0.00018161	-0.057127	-3.1895E-05	558.3117340826119	48.148	0.52048	48.171	47.937	48.457	0.022274					26	13	3	0	0	0	0.82886	1	3647	3647		37.812	4.9991	1	152120			54471	1456	36328	36343	61709	61709					0.05675031249234053
SLEEERPAL	9	Unmodified	_SLEEERPAL_					0	0	0		nc|ENSG00000166889|Q86TB9-2|PATL1;ENSG00000166889|ENST00000300146|PATL1;nc|ENSG00000166889|Q86TB9-4|PATL1	nc|ENSG00000166889|Q86TB9-2|PATL1	nc|ENSG00000166889|Q86TB9-2|PATL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.2720336914062	2	522.272021	1042.52949	-0.90194	-0.00047106	0.41756	0.00021808	-0.48438	-0.00025298	522.2720353575503	46.853	0.51814	47.776	47.563	48.081	0.92315					20	11	2	0	0	0	0.36616	1	4450	4450		60.118	6.7668	1	1225700			54472	6242	36329	36344	61710	61710					0.009925448553985916
SLEEVVRLVK	10	Unmodified	_SLEEVVRLVK_					0	0	0		ENSG00000151376|ENST00000524826|ME3	ENSG00000151376|ENST00000524826|ME3	ENSG00000151376|ENST00000524826|ME3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.3572387695312	2	586.355888	1170.69722	-0.10559	-6.1913E-05	1.3648	0.00080028	1.2592	0.00073836	586.3566501896843	73.315	0.36684	73.868	73.678	74.045	0.55386					29	13	3	0	0	0	0.8651	1	8259	8259		25.574	1.0549	1	704910			54473	5112	36330	36345	61711	61711					0.11870232119963475
SLEILAVLA	9	Unmodified	_SLEILAVLA_					0	0	0		nc|ENSG00000109680|Q8N5T2-2|TBC1D19;ENSG00000109680|ENST00000264866|TBC1D19;ENST00000502873.5_1_4:26585743-26755545:+|nuORF	nc|ENSG00000109680|Q8N5T2-2|TBC1D19	nc|ENSG00000109680|Q8N5T2-2|TBC1D19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.79010009765625	2	464.789318	927.564084	-0.88537	-0.00041151	3.8254	0.001778	2.94	0.0013665	464.79098266785445	37.031	1.7451	36.978	35.836	37.581	-0.053558					86	38	3	0	0	0	0.76402	1	2420	2420		35.201	6.9464	1	298640			54474	2475	36331	36346	61712	61712					0.09740412734129222
SLEKKQEPTLA	11	Unmodified	_SLEKKQEPTLA_					0	0	0			REV__nc|ENSG00000149925|P04075|ALDOA	REV__nc|ENSG00000149925|P04075|ALDOA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3471069335938	2	622.34826	1242.68197	-0.17246	-0.00010733	-2.1066	-0.001311	-2.2791	-0.0014184	622.3467162320231	96.253	1.81	96.253	95.614	97.424	0					80	41	2	0	0	0	0.69995	1	9674	9674		31.53	1.0262	1	250670	+		54475	20197	36332	36347	61713	61713					0.07033320532150356
SLELEVVAEA	10	Unmodified	_SLELEVVAEA_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2794189453125	2	530.282054	1058.54956	-0.035501	-1.8825E-05	-0.09382	-4.9751E-05	-0.12932	-6.8577E-05	530.2818013006336	76.645	0.60595	76.694	76.334	76.94	0.049194					41	22	2	0	0	0	0.51302	1	7409	7409		54.776	7.119	1	132050			54476	15003;5274	36333	36348	61714	61714					0.02262295795344471
SLELLVEAL	9	Unmodified	_SLELLVEAL_					0	0	0		ENSG00000221829|ENST00000378643|FANCG	ENSG00000221829|ENST00000378643|FANCG	ENSG00000221829|ENST00000378643|FANCG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.7917175292969	2	493.792058	985.569563	0.75109	0.00037088	-0.77615	-0.00038326	-0.025059	-1.2374E-05	493.7915393325102	91.749	1.815	92.199	91.714	93.529	0.44958					108	42	4	0	0	0	0.64922	1	10862	10862		44.117	1.7207	1	2387900			54477	8670	36334	36349	61715	61715					0.07620091525939188
SLELLVEAL	9	Unmodified	_SLELLVEAL_					0	0	0		ENSG00000221829|ENST00000378643|FANCG	ENSG00000221829|ENST00000378643|FANCG	ENSG00000221829|ENST00000378643|FANCG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7919616699219	2	493.792058	985.569563	-1.0082	-0.00049786	0.99365	0.00049066	-0.014583	-7.2009E-06	493.79239689427686	91.796	2.3688	92.259	91.807	94.176	0.46249					119	55	4	0	0	0	0.74721	1	10972	10972		37.159	2.9866	1	3049900			54478	8670	36334	36349	61716	61716					0.07620091525939188
SLEPAVEPK	9	Unmodified	_SLEPAVEPK_					0	0	0			REV__ENSG00000163833|ENST00000338040|FBXO40	REV__ENSG00000163833|ENST00000338040|FBXO40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.26739501953125	2	485.266207	968.517862	-0.8809	-0.00042747	-1.7168	-0.00083312	-2.5977	-0.0012606	485.26525209052494	43.295	1.2543	43.728	43.419	44.674	0.4334					80	30	5	0	0	0	0.22631	1	3919	3919		71.296	2.5089	1	9714800	+		54479	20983	36335	36350	61717	61717					0.032343478320512986
SLEPGRPAAPS	11	Unmodified	_SLEPGRPAAPS_					0	0	0		nc|ENSG00000060069|Q9Y5B0-4|CTDP1;ENSG00000060069|ENST00000613122|CTDP1	nc|ENSG00000060069|Q9Y5B0-4|CTDP1	nc|ENSG00000060069|Q9Y5B0-4|CTDP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.2852783203125	2	541.285463	1080.55637	0.52598	0.00028471	-0.67244	-0.00036398	-0.14646	-7.9278E-05	541.2849430955068	20.499	0.76031	20.43	20.175	20.935	-0.069733					65	32	4	0	0	0	0.57736	1	531	531		46.457	0.48454	1	220230			54480	1059	36336	36351	61718	61718					0.01931653466544958
SLESSLFFY	9	Unmodified	_SLESSLFFY_					0	0	0			REV__ENST00000343638.9_1_17:42283916-42284555:-|nuORF	REV__ENST00000343638.9_1_17:42283916-42284555:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.2586669921875	2	546.76604	1091.51753	-0.70436	-0.00038512	-1.6165	-0.00088384	-2.3209	-0.001269	546.7651402620565	59.622	0.72976	60.175	59.733	60.463	0.55323					35	18	3	0	0	0	0.15544	1	6297	6297		73.975	0	1	1284400	+		54481	25294	36337	36352	61719	61719					-0.024570718878067055
SLESVLAKL	9	Unmodified	_SLESVLAKL_					0	0	0			REV__nc|ENSG00000197948|Q86WN1-3|FCHSD1	REV__nc|ENSG00000197948|Q86WN1-3|FCHSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.2922668457031	2	480.292225	958.569897	-0.23876	-0.00011467	0.61317	0.0002945	0.37441	0.00017983	480.2925060650638	29.892	0.60714	29.849	29.533	30.14	-0.043095					20	13	2	0	0	0	0.78983	1	1614	1614		27.882	0	1	47111	+		54482	23281	36338	36353	61720	61720					0.08895511245816579
SLEVKLLQ	8	Unmodified	_SLEVKLLQ_					0	0	0		ENST00000530242.1_1_8:145748705-145749668:+|nuORF	ENST00000530242.1_1_8:145748705-145749668:+|nuORF	ENST00000530242.1_1_8:145748705-145749668:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.2870178222656	2	465.286943	928.559333	-1.3462	-0.00062637	1.5269	0.00071045	0.18069	8.4074E-05	465.28751849052463	77.21	0.82004	77.301	76.982	77.802	0.091438					97	41	3	0	0	0	0.53378	1	7237	7237		74.255	2.3776	1	1491000			54483	13343	36339	36354	61721	61721					0.09219528591370363
SLEVRVKDCVE	11	Unmodified	_SLEVRVKDCVE_					0	0	0		ENSG00000165370|ENST00000651716|GPR101	ENSG00000165370|ENST00000651716|GPR101	ENSG00000165370|ENST00000651716|GPR101	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	638.8343505859375	2	638.83192	1275.64929	1.5107	0.00096509	4.399	0.0028102	5.9097	0.0037753	638.8343540273713	74.714	0.84661	74.841	74.555	75.402	0.1271					66	22	4	0	0	0	0.11202	2	6907	6907;6952		90.601	18.411	1	652180			54484	6076	36340	36355	61722;61723	61722					0.022487901376052832
SLFFAPCI	8	Unmodified	_SLFFAPCI_					0	0	0			REV__nc|ENSG00000136404|Q9BZW5-2|TM6SF1	REV__nc|ENSG00000136404|Q9BZW5-2|TM6SF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.23211669921875	2	449.230582	896.446611	-0.14348	-6.4457E-05	0.19497	8.7587E-05	0.051486	2.3129E-05	449.2306007992336	83.429	3.7259	83.496	82.088	85.814	0.066719					221	85	3	0	0	0	0.89457	1	8264	8264		37.028	0	1	236580	+		54485	19308	36341	36356	61724	61724					-0.005754434063192093
SLFGSPVAK	9	Unmodified	_SLFGSPVAK_					0	0	0		nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB;ENSG00000186260|ENST00000571589|MRTFB	nc|ENSG00000186260|Q9ULH7-4|MRTFB	nc|ENSG00000186260|Q9ULH7-4|MRTFB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.25860595703125	2	453.258185	904.501818	-0.75087	-0.00034034	0.39651	0.00017972	-0.35436	-0.00016062	453.2580610307469	46.126	0.5201	47.021	46.767	47.287	0.89542					27	12	3	0	0	0	0.64555	1	4346	4346		44.377	0.26039	1	1491400			54486	7787	36342	36357	61725	61725					0.04574686385797122
SLFGWLIFIRI	11	Unmodified	_SLFGWLIFIRI_					0	0	0			REV__ENST00000488263.5_1_3:3197887-3198154:-|nuORF	REV__ENST00000488263.5_1_3:3197887-3198154:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.607666015625	3	455.607819	1363.80163	0.47438	0.00021613	0.51539	0.00023482	0.98977	0.00045095	455.6080397143124	69.123	0.72706	69.251	68.88	69.607	0.12838					69	31	3	0	0	0	0.73621	1	6253	6253		25.126	2.5644	1	233840	+		54487	27592	36343	36358	61726	61726					0.13427978667368734
SLFKIHGGIIK	11	Unmodified	_SLFKIHGGIIK_					0	0	0		ENST00000260327.8_1_15:44820654-44820852:+|nuORF	ENST00000260327.8_1_15:44820654-44820852:+|nuORF	ENST00000260327.8_1_15:44820654-44820852:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.9227600097656	3	404.920286	1211.73903	2.788	0.0011289	3.7066	0.0015009	6.4947	0.0026298	404.92169157251993	26.492	2.181	26.459	26.021	28.202	-0.032125					96	52	4	0	0	0	0.71207	1	1172	1172		29.551	4.4248	1	297020			54488	9385	36344	36359	61727	61727					0.14162832599186004
SLFLLRKHPP	10	Unmodified	_SLFLLRKHPP_					0	0	0		ENST00000413366.7_1_17:64803756-64804182:+|nuORF	ENST00000413366.7_1_17:64803756-64804182:+|nuORF	ENST00000413366.7_1_17:64803756-64804182:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.37158203125	2	604.369133	1206.72371	-0.12671	-7.6581E-05	-3.5023	-0.0021167	-3.629	-0.0021933	604.3667576937121	114.61	2.863	114.64	114.11	116.97	0.026466					110	87	2	0	0	0	0.85438	1	12529	12529		16.473	0.83134	1	97003			54489	11350	36345	36360	61728	61728					0.12861965801971564
SLFSPGSVTFF	11	Unmodified	_SLFSPGSVTFF_					0	0	0		ENST00000372398.5_1_9:132996136-132996268:+|nuORF	ENST00000372398.5_1_9:132996136-132996268:+|nuORF	ENST00000372398.5_1_9:132996136-132996268:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	594.7998046875	2	594.800414	1187.58628	-1.1197	-0.00066598	1.2999	0.0007732	0.18027	0.00010722	594.8011834611337	81.271	0.85636	81.329	80.953	81.809	0.057816					37	19	3	0	0	0	0.19725	1	8099	8099		79.713	6.8333	1	248920			54490	10698	36346	36361	61729	61729					-1.4075880926611717E-05
SLFVAAII	8	Unmodified	_SLFVAAII_					0	0	0		ENSG00000186951|ENST00000407236|PPARA	ENSG00000186951|ENST00000407236|PPARA	ENSG00000186951|ENST00000407236|PPARA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.2585144042969	2	417.260197	832.50584	-2.1518	-0.00089787	-1.6828	-0.00070218	-3.8346	-0.0016	417.25934690137603	21.231	2.6146	21.231	20.572	23.187	0					203	120	3	0	0	0	0.89457	1	572	572		37.028	0	1	250530			54491	7830	36347	36362	61730	61730					0.08288775879520927
SLFVAAII	8	Unmodified	_SLFVAAII_					0	0	0		ENSG00000186951|ENST00000407236|PPARA	ENSG00000186951|ENST00000407236|PPARA	ENSG00000186951|ENST00000407236|PPARA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25689697265625	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.83466	1	613	613		23.037	0	1	679020			54492	7830	36347	36362	61731	61731					0.08288775879520927
SLFVAAII	8	Unmodified	_SLFVAAII_					0	0	0		ENSG00000186951|ENST00000407236|PPARA	ENSG00000186951|ENST00000407236|PPARA	ENSG00000186951|ENST00000407236|PPARA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2585144042969	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.87807	1	551	551		31.579	3.3246	1	817900			54493	7830	36347	36362	61732	61732					0.08288775879520927
SLGAALGG	8	Unmodified	_SLGAALGG_					0	0	0			REV__ENSG00000155816|ENST00000319653|FMN2	REV__ENSG00000155816|ENST00000319653|FMN2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	645.3032836914062	1	645.356616	644.34934	0.41951	0.00027073	-0.078388	-5.0588E-05	0.34112	0.00022015	645.3565083268608	42.497	0.61039	42.562	42.303	42.914	0.065037					28	18	2	0	0	0	0.4196	1	2844	2844		20.482	0	1	163870	+		54494	20446	36348	36363	61733	61733					0.012939107090460311
SLGALLLF	8	Unmodified	_SLGALLLF_					0	0	0			REV__nc|ENSG00000164828|O94901-6|SUN1	REV__nc|ENSG00000164828|O94901-6|SUN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25628662109375	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.86791	1	641	641		28.254	5.2176	1	679020	+		54495	21119	36349	36364	61734	61734					0.08288775879509558
SLGAMGLDWPV	11	Unmodified	_SLGAMGLDWPV_					0	0	0			REV__nc|ENSG00000099326|P28698-2|MZF1	REV__nc|ENSG00000099326|P28698-2|MZF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.8165283203125	2	573.286617	1144.55868	-0.99512	-0.00057049	1.2999	0.00074522	0.30479	0.00017473	573.2870665342718	36.167	0.67681	36.148	35.876	36.553	-0.018677					30	14	3	0	0	0	0.17431	1	2320	2320		31.53	4.8369	1	94705	+		54496	17090	36350	36365	61735	61735					-0.007816341199941235
SLGASLDLV	9	Unmodified	_SLGASLDLV_					0	0	0			REV__ENST00000259021.8_1_17:47905076-47905208:+|nuORF	REV__ENST00000259021.8_1_17:47905076-47905208:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2631530761719	2	437.74765	873.480748	-0.15693	-6.8694E-05	0.32841	0.00014376	0.17148	7.5066E-05	437.7480133786518	39.639	0.38785	39.648	39.385	39.773	0.0092812					11	8	2	0	0	0	0.20789	1	2774	2774		10.265	0	1	21953	+		54497	24360	36351	36366	61736	61736					0.038946762862906326
SLGCLAHSTL	10	Unmodified	_SLGCLAHSTL_					0	0	0			REV__ENST00000303924.4_1_8:122625978-122626098:-|nuORF	REV__ENST00000303924.4_1_8:122625978-122626098:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.73284912109375	2	501.257859	1000.50117	0.45638	0.00022877	2.5882	0.0012974	3.0446	0.0015261	501.2588427870354	31.037	0.43412	31.04	30.753	31.187	0.0037212					13	9	2	0	0	0	0.37624	1	2079	2079		37.812	12.237	1	67832	+		54498	24806	36352	36367	61737	61737					0.0009352367445671916
SLGEAWAQVKK	11	Unmodified	_SLGEAWAQVKK_					0	0	0		nc|ENSG00000007237|O60861-2|GAS7;nc|ENSG00000007237|O60861-1|GAS7;nc|ENSG00000007237|O60861-4|GAS7;ENSG00000007237|ENST00000432992|GAS7	nc|ENSG00000007237|O60861-2|GAS7	nc|ENSG00000007237|O60861-2|GAS7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.837158203125	2	608.837862	1215.66117	-0.14489	-8.8218E-05	-0.99259	-0.00060432	-1.1375	-0.00069254	608.8371154069557	110.53	1.2053	110.53	110.28	111.48	0					111	36	5	0	0	0	0.72918	2	11481	11481;11509		26.693	3.1702	1	1502000			54499	722	36353	36368	61738;61739	61738					0.06196774943123273
SLGGERVSMD	10	Unmodified	_SLGGERVSMD_					0	0	0			REV__ENST00000428046.7_1_15:43622876-43623026:+|nuORF	REV__ENST00000428046.7_1_15:43622876-43623026:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7816772460938	2	525.747856	1049.48116	0.18164	9.5495E-05	2.2514	0.0011837	2.433	0.0012792	525.7481389214655	49.122	0.33066	49.582	49.459	49.789	0.45983					11	7	2	0	0	0	0.37624	1	4770	4770		39.253	16.21	1	124210	+		54500	26578	36354	36369	61740	61740					-0.041602720561513706
SLGGGGPGPLP	11	Unmodified	_SLGGGGPGPLP_					0	0	0			REV__ENST00000388747.8_1_9:130688255-130692027:-|nuORF	REV__ENST00000388747.8_1_9:130688255-130692027:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.744873046875	2	454.745442	907.476331	2.7644	0.0012571	-3.8708	-0.0017602	-1.1064	-0.00050315	454.74355172728065	103.83	1.5253	103.79	103.16	104.69	-0.043755					91	36	4	0	0	0	0.72918	1	11387	11387		26.693	1.2427	1	836250	+		54501	25987	36355	36370	61741	61741					0.01889211863363016
SLGIATKSRSD	11	Unmodified	_SLGIATKSRSD_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3297119140625	2	567.809302	1133.60405	1.5018	0.00085273	-3.0006	-0.0017037	-1.4988	-0.00085102	567.8070877439176	92.162	0.81729	92.207	91.594	92.411	0.045456					26	18	2	0	0	0	0.17527	1	9647	9647		40.058	0	1	70959	+		54502	23025	36356	36371	61742	61742					0.04259307666757195
SLGIPVNHLI	10	Unmodified	_SLGIPVNHLI_					0	0	0		ENSG00000161055|ENST00000292641|SCGB3A1;ENST00000512120.1_1_5:180017233-180018052:-|nuORF	ENSG00000161055|ENST00000292641|SCGB3A1	ENSG00000161055|ENST00000292641|SCGB3A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8168334960938	2	531.818941	1061.62333	-0.04786	-2.5453E-05	-3.9998	-0.0021272	-4.0476	-0.0021526	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.74274	1	8783	8783		42.396	4.5846	1	4916300			54503	5628	36357	36372	61743	61743					0.09498308748334239
SLGIPVNHLI	10	Unmodified	_SLGIPVNHLI_					0	0	0		ENSG00000161055|ENST00000292641|SCGB3A1;ENST00000512120.1_1_5:180017233-180018052:-|nuORF	ENSG00000161055|ENST00000292641|SCGB3A1	ENSG00000161055|ENST00000292641|SCGB3A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8171997070312	2	531.818941	1061.62333	-1.264	-0.00067223	-2.5284	-0.0013447	-3.7925	-0.0020169	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.8608	2	10524	10440;10524		34.173	1.3601	1	4586300			54504	5628	36357	36372	61744;61745	61745					0.09498308748334239
SLGIRSSTRLA	11	Unmodified	_SLGIRSSTRLA_					0	0	0			REV__ENSG00000116183|ENST00000367662|PAPPA2	REV__ENSG00000116183|ENST00000367662|PAPPA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.84033203125	2	580.840936	1159.66732	-0.43283	-0.00025141	-0.24886	-0.00014455	-0.68169	-0.00039595	580.8405993802119	69.859	0.92783	69.822	69.57	70.498	-0.036957					124	48	3	0	0	0	0.7144	1	6766	6766		29.17	2.1227	1	18374000	+		54505	18186	36358	36373	61746	61746					0.09387293174654587
SLGISRSKTP	10	Unmodified	_SLGISRSKTP_					0	0	0		ENSG00000115738|ENST00000396290|ID2	ENSG00000115738|ENST00000396290|ID2	ENSG00000115738|ENST00000396290|ID2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3033447265625	2	523.303655	1044.59276	1.2403	0.00064907	-1.1926	-0.00062409	0.047741	2.4983E-05	523.302929168532	91.415	2.5669	91.46	91.141	93.708	0.045448					111	60	2	0	0	0	0.8545	1	9573	9573		36.447	4.9169	1	1018700			54506	2868	36359	36374	61747	61747					0.07224530363282611
SLGLGLLPV	9	Unmodified	_SLGLGLLPV_					0	0	0		ENSG00000146360|ENST00000275169|GPR6;nc|ENSG00000146360|P46095-2|GPR6	ENSG00000146360|ENST00000275169|GPR6	ENSG00000146360|ENST00000275169|GPR6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7784118652344	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.7932	1	2611	2611		19.36	1.0356	1	2524800			54507	4837	36360	36375	61748	61748					0.10388447425282266
SLGLNECN	8	Unmodified	_SLGLNECN_					0	0	0			REV__ENSG00000134061|ENST00000256447|CD180	REV__ENSG00000134061|ENST00000256447|CD180	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.2217102050781	2	425.192185	848.369817	0.80929	0.0003441	0.77134	0.00032797	1.5806	0.00067207	425.1915718652258	88.189	0.27762	88.638	88.515	88.793	0.44893					9	6	2	0	0	0	0.4196	1	10366	10366		25.574	18.381	1	57962	+		54508	19113	36361	36376	61749	61749					-0.06043286693466143
SLGLSQEKKAS	11	Unmodified	_SLGLSQEKKAS_					0	0	0		ENSG00000170927|ENST00000371117|PKHD1	ENSG00000170927|ENST00000371117|PKHD1	ENSG00000170927|ENST00000371117|PKHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3192749023438	2	574.319502	1146.62445	2.1223	0.0012189	-2.2138	-0.0012714	-0.091457	-5.2525E-05	574.3181422905453	94.479	4.1031	94.419	93.372	97.475	-0.059204					230	96	5	0	0	0	0.68532	1	10002	10002		33.922	1.1711	1	1734300			54509	6625	36362	36377	61750	61750					0.05700478326571101
SLGPLLYL	8	Unmodified	_SLGPLLYL_					0	0	0			REV__ENST00000531593.1_1_8:145139661-145140095:+|nuORF	REV__ENST00000531593.1_1_8:145139661-145140095:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2635498046875	2	438.265479	874.516405	-1.0936	-0.00047928	-3.4121	-0.0014954	-4.5057	-0.0019747	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.82464	1	2842	2842		21.702	1.2205	1	2862500	+		54510	23275	36363	36378	61751	61751					0.07412758533939723
SLGRGYVK	8	Unmodified	_SLGRGYVK_					0	0	0			REV__nc|ENSG00000136068|O75369-5|FLNB	REV__nc|ENSG00000136068|O75369-5|FLNB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.2556457519531	2	440.255977	878.497401	0.53539	0.00023571	-2.119	-0.00093291	-1.5836	-0.0006972	440.254928206011	67.151	0.53613	67.179	66.911	67.447	0.02858					46	25	2	0	0	0	0.86677	1	6378	6378		27.882	5.9224	1	118370	+		54511	19284	36364	36379	61752	61752					0.05329221962904285
SLGRRPLN	8	Unmodified	_SLGRRPLN_					0	0	0		ENST00000333646.10_2_X:70338483-70339224:+|nuORF	REV__ENST00000511584.2_1_19:19627047-19637070:+|nuORF	REV__ENST00000511584.2_1_19:19627047-19637070:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7715148925781	2	456.772326	911.530098	-1.5287	-0.00069828	1.2575	0.00057438	-0.27125	-0.0001239	456.77292963947184	89.845	2.4068	90.316	88.994	91.401	0.47068					69	60	2	0	0	0	0.87064	1	10661	10661		29.15	3.5755	1	1003600			54512	10137	36365	36380	61753	61753					0.07079429085740685
SLGSTRGVM	9	Unmodified	_SLGSTRGVM_					0	0	0			REV__ENST00000227322.7_2_11:116649484-116649634:-|nuORF	REV__ENST00000227322.7_2_11:116649484-116649634:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.2366943359375	2	454.236927	906.459301	0.6644	0.0003018	-3.0889	-0.0014031	-2.4245	-0.0011013	454.2355373409415	28.004	1.2128	27.981	27.272	28.484	-0.023556					42	28	3	0	0	0	0.77244	1	1290	1290		32.812	0	1	35471	+		54513	24181	36366	36381	61754	61754					0.002329679859258249
SLGSTRGVM	9	Unmodified	_SLGSTRGVM_					0	0	0			REV__ENST00000227322.7_2_11:116649484-116649634:-|nuORF	REV__ENST00000227322.7_2_11:116649484-116649634:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	454.236927	906.459301	-1.3084	-0.00059431	-2.7807	-0.0012631	-4.0891	-0.0018574	454.2353760970686	27.993	0.17297	28.062	27.986	28.159	0.068678	0.087189	0.00044099	NaN	32.812	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21488	+		54514	24181	36366	36381							0.002329679859258249
SLGSTVKSHT	10	Unmodified	_SLGSTVKSHT_					0	0	0		ENSG00000162645|ENST00000370466|GBP2;nc|ENSG00000117226|Q9H0R5-4|GBP3;ENSG00000117226|ENST00000370481|GBP3;ENST00000370482.6_1_1:89479706-89486410:-|nuORF	ENSG00000162645|ENST00000370466|GBP2	ENSG00000162645|ENST00000370466|GBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7750244140625	2	508.772188	1015.52982	1.454	0.00073976	2.1715	0.0011048	3.6255	0.0018445	508.77310523775367	51.313	0.53738	52.065	51.777	52.315	0.75174					29	12	3	0	0	0	0.73395	1	5117	5117		42.864	0.46813	1	819430			54515	5712	36367	36382	61755	61755					0.022679645752418764
SLGSVATKL	9	Unmodified	_SLGSVATKL_					0	0	0		ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	ENSG00000133056|ENST00000684373|PIK3C2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26336669921875	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.78536	1	2650	2650		29.15	0	1	2862500			54516	3851	36368	36383	61756	61756					0.07010669040232642
SLGTRGGY	8	Unmodified	_SLGTRGGY_					0	0	0			REV__ENST00000573651.5_3_17:7227525-7227791:-|nuORF	REV__ENST00000573651.5_3_17:7227525-7227791:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2479553222656	2	405.70886	809.403166	-1.928	-0.0007822	-1.3667	-0.00055447	-3.2947	-0.0013367	405.7089706379772	89.888	0.90208	90.064	89.65	90.552	0.17579					30	20	2	0	0	0	0.4196	1	8892	8892		16.473	0	1	46495	+		54517	28964	36369	36384	61757	61757					-0.00915916859241861
SLGTRGGY	8	Unmodified	_SLGTRGGY_					0	0	0			REV__ENST00000573651.5_3_17:7227525-7227791:-|nuORF	REV__ENST00000573651.5_3_17:7227525-7227791:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2479553222656	2	405.70886	809.403166	-1.9278	-0.00078215	0.66472	0.00026968	-1.2631	-0.00051246	405.7090970030727	89.333	0.61021	89.505	89.211	89.822	0.17233					19	13	2	0	0	0	0.4196	1	8892	8892		16.473	0	1	95716	+		54518	28964	36369	36384	61758	61758					-0.00915916859241861
SLGVAALYK	9	Unmodified	_SLGVAALYK_					0	0	0		ENSG00000164919|ENST00000520468|COX6C	ENSG00000164919|ENST00000520468|COX6C	ENSG00000164919|ENST00000520468|COX6C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.2739562988281	2	461.273835	920.533118	-0.49496	-0.00022831	-0.31709	-0.00014627	-0.81205	-0.00037458	461.27352336535984	51.531	0.75399	51.966	51.659	52.413	0.43505					37	17	3	0	0	0	0.58668	2	5136	5132;5136		47.657	10.498	1	1278400			54519	6023	36370	36385	61759;61760	61760					0.06967259419900529
SLGVAALYK	9	Unmodified	_SLGVAALYK_					0	0	0		ENSG00000164919|ENST00000520468|COX6C	ENSG00000164919|ENST00000520468|COX6C	ENSG00000164919|ENST00000520468|COX6C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.2748718261719	2	461.273835	920.533118	0.54579	0.00025176	-1.4365	-0.00066261	-0.89069	-0.00041085	461.2729476357354	51.297	0.62033	52.049	51.818	52.438	0.75174					34	14	3	0	0	0	0.6204	2	5107	5107;5121		45.972	5.3996	1	1240100			54520	6023	36370	36385	61761;61762	61761					0.06967259419900529
SLGWEGAKGGE	11	Unmodified	_SLGWEGAKGGE_					0	0	0			REV__ENST00000441788.6_1_19:3535369-3535978:+|nuORF	REV__ENST00000441788.6_1_19:3535369-3535978:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.7621459960938	2	545.76182	1089.50909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.849	1	49.846	49.346	50.346	-0.0030327								0	0	0	0.56276	1	4191	4191		47.96	7.9014	1		+		54521	26761	36371	36386	61763	61763					-0.03208625804427356
SLHFILSCKV	10	Unmodified	_SLHFILSCKV_					0	0	0			REV__ENST00000493220.5_2_17:29552193-29556516:+|nuORF	REV__ENST00000493220.5_2_17:29552193-29556516:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.8191528320312	2	573.820627	1145.6267	1.1984	0.00068765	-3.5092	-0.0020137	-2.3109	-0.001326	573.8183058488139	100.11	0.70577	100.44	100.14	100.84	0.33295					44	17	3	0	0	0	0.66675	1	12098	12098		46.457	10.01	1	558030	+		54522	27687	36372	36387	61764	61764					0.05971235530660124
SLHFILSCKV	10	Unmodified	_SLHFILSCKV_					0	0	0			REV__ENST00000493220.5_2_17:29552193-29556516:+|nuORF	REV__ENST00000493220.5_2_17:29552193-29556516:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.8193969726562	2	573.820627	1145.6267	2.0517	0.0011773	-4.3312	-0.0024853	-2.2795	-0.001308	573.8177633263879	100.19	0.70939	100.53	100.15	100.86	0.34591					42	17	3	0	0	0	0.76096	1	12166	12166		41.427	2.1738	1	590550	+		54523	27687	36372	36387	61765	61765					0.05971235530660124
SLHFKIQILL	10	Unmodified	_SLHFKIQILL_					0	0	0		ENST00000467956.1_1_3:33731266-33759494:-|nuORF	ENST00000467956.1_1_3:33731266-33759494:-|nuORF	ENST00000467956.1_1_3:33731266-33759494:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.5887756347656	3	404.588536	1210.74378	0.081753	3.3076E-05	1.5238	0.00061652	1.6056	0.0006496	404.58905474066694	39.518	1.496	39.488	38.762	40.258	-0.03027					92	35	3	0	0	0	0.86106	1	2716	2716		33.922	5.8401	1	403230			54524	12167	36373	36388	61766	61766					0.14683716741956232
SLHFKIQILL	10	Unmodified	_SLHFKIQILL_					0	0	0		ENST00000467956.1_1_3:33731266-33759494:-|nuORF	ENST00000467956.1_1_3:33731266-33759494:-|nuORF	ENST00000467956.1_1_3:33731266-33759494:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.5878601074219	3	404.588536	1210.74378	0.18961	7.6715E-05	0.61786	0.00024998	0.80747	0.00032669	404.5886662890934	41.346	1.1707	41.315	40.657	41.828	-0.030991					72	31	3	0	0	0	0.85441	1	3027	3027		20.837	1.2102	1	279590			54525	12167	36373	36388	61767	61767					0.14683716741956232
SLHGPRTLSLL	11	Unmodified	_SLHGPRTLSLL_					0	0	0			REV__ENST00000586507.1_1_18:14123135-14124352:-|nuORF	REV__ENST00000586507.1_1_18:14123135-14124352:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8563232421875	2	597.35368	1192.69281	0.9357	0.00055895	2.5932	0.001549	3.5289	0.002108	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.6493	1	9522	9522		38.754	0.94209	1	19058000	+		54526	29105	36374	36389	61768	61768					0.10416767697097384
SLHKQYRE	8	Unmodified	_SLHKQYRE_					0	0	0			REV__nc|ENSG00000170264|Q3B820-2|FAM161A	REV__nc|ENSG00000170264|Q3B820-2|FAM161A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7791137695312	2	530.780348	1059.54614	0.1651	8.7634E-05	-3.4564	-0.0018346	-3.2913	-0.0017469	530.7787664374874	55.197	0.70773	55.765	55.531	56.239	0.56836					37	16	4	0	0	0	0.88185	1	5665	5665		32.812	2.9709	1	1565500	+		54527	21640	36375	36390	61769	61769					0.018750905319848243
SLHLNVVPPVC	11	Unmodified	_SLHLNVVPPVC_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1;nc|ENSG00000166783|Q9Y4F3-6|MARF1;ENST00000548216.2_1_16:15729470-15733102:-|nuORF	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3428344726562	2	589.323534	1176.63251	-0.67649	-0.00039867	-0.74122	-0.00043682	-1.4177	-0.00083549	589.8251822270453	95.218	0.24854	95.287	95.141	95.389	0.068344					8	5	2	0	0	0	0.17431	1	9965	9965		31.53	3.6476	1	75879			54528	6228	36376	36391	61770	61770					0.0512633404234748
SLHLNVVPPVC	11	Unmodified	_SLHLNVVPPVC_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1;nc|ENSG00000166783|Q9Y4F3-6|MARF1;ENST00000548216.2_1_16:15729470-15733102:-|nuORF	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3429565429688	2	589.323534	1176.63251	-0.67727	-0.00039913	0.57549	0.00033915	-0.10178	-5.9983E-05	589.3230432403084	94.751	0.54951	94.819	94.591	95.141	0.068336					15	12	2	0	0	0	0.17387	1	9903	9903		30.318	0	1	114640			54529	6228	36376	36391	61771	61771					0.0512633404234748
SLHPIVRVVM	10	Unmodified	_SLHPIVRVVM_					0	0	0		ENSG00000167332|ENST00000396950|OR51E2	ENSG00000167332|ENST00000396950|OR51E2	ENSG00000167332|ENST00000396950|OR51E2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.843017578125	2	575.841894	1149.66923	-0.8907	-0.0005129	3.3183	0.0019108	2.4276	0.0013979	575.8435917029874	92.113	4.6266	92.576	91.807	96.434	0.46249					281	113	5	0	0	0	0.37624	1	10891	10891		19.104	5.3282	1	2144700			54530	6287	36377	36392	61772	61772					0.10038630658914371
SLHRKALESD	10	Unmodified	_SLHRKALESD_					0	0	0		nc|ENSG00000128815|Q6ZS81-5|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;ENSG00000128815|ENST00000325239|WDFY4;ENST00000465910.5_1_10:50154093-50174894:+|nuORF	nc|ENSG00000128815|Q6ZS81-5|WDFY4	nc|ENSG00000128815|Q6ZS81-5|WDFY4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	578.3104858398438	2	578.309469	1154.60439	3.0835	0.0017832	-1.3488	-0.00078002	1.7347	0.0010032	578.3084884476433	110.4	1.8051	110.37	110.09	111.9	-0.027641					157	59	5	0	0	0	0.8545	1	12234	12234		36.447	0	1	3259900			54531	3561	36378	36393	61773	61773					0.0332672738659312
SLHVKHTN	8	Unmodified	_SLHVKHTN_					0	0	0		ENSG00000147082|ENST00000376042|CCNB3	ENSG00000147082|ENST00000376042|CCNB3	ENSG00000147082|ENST00000376042|CCNB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.25555419921875	2	468.256508	934.498464	-0.24701	-0.00011566	-3.3298	-0.0015592	-3.5768	-0.0016749	468.25479155810393	81.956	2.8945	82.014	80.909	83.803	0.057808					126	66	2	0	0	0	0.90983	1	8129	8129		42.396	0	1	193290			54532	4879	36379	36394	61774	61774					0.028594363317893112
SLHVKHTN	8	Unmodified	_SLHVKHTN_					0	0	0		ENSG00000147082|ENST00000376042|CCNB3	ENSG00000147082|ENST00000376042|CCNB3	ENSG00000147082|ENST00000376042|CCNB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2547912597656	2	468.256508	934.498464	0.60478	0.00028319	-4.1932	-0.0019635	-3.5884	-0.0016803	468.25441943244317	81.627	3.5592	81.77	80.781	84.34	0.14352					144	82	2	0	0	0	0.89043	1	7964	7964		35.618	5.1146	1	205460			54533	4879	36379	36394	61775	61775					0.028594363317893112
SLIDILVAL	9	Unmodified	_SLIDILVAL_					0	0	0		nc|ENSG00000144452|Q86UK0-2|ABCA12;ENSG00000144452|ENST00000272895|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80609130859375	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.7932	1	2488	2488		24.203	1.1603	1	336090			54534	4708	36380	36395	61776	61776					0.11580985768239316
SLIFVLPSR	9	Unmodified	_SLIFVLPSR_					0	0	0			REV__nc|ENSG00000183914|Q9P225-2|DNAH2	REV__nc|ENSG00000183914|Q9P225-2|DNAH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3152465820312	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.78536	1	12584	12584		29.15	3.5755	1	4038100	+		54535	22634	36381	36396	61777	61777					0.10343210236646883
SLIGKKGQQK	10	Unmodified	_SLIGKKGQQK_					0	0	0		nc|ENSG00000105968|Q71UI9-4|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENSG00000105968|ENST00000308153|H2AZ2;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-3|H2AZ2	nc|ENSG00000105968|Q71UI9-4|H2AZ2	nc|ENSG00000105968|Q71UI9-4|H2AZ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.83447265625	2	543.835123	1085.65569	-0.016287	-8.8572E-06	-0.15929	-8.663E-05	-0.17558	-9.5487E-05	543.834814827704	17.604	0.31365	16.993	16.844	17.157	-0.6107					16	7	3	0	0	0	0.0037703	1	279	279		136.27	48.514	1	212590			54536	2268	36382	36397	61778	61778					0.11629096151318663
SLIGKKGQQK	10	Unmodified	_SLIGKKGQQK_					0	0	0		nc|ENSG00000105968|Q71UI9-4|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENSG00000105968|ENST00000308153|H2AZ2;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-3|H2AZ2	nc|ENSG00000105968|Q71UI9-4|H2AZ2	nc|ENSG00000105968|Q71UI9-4|H2AZ2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	543.835123	1085.65569	-0.012703	-6.9082E-06	-0.04543	-2.4706E-05	-0.058133	-3.1615E-05	543.8349141593202	17.498	0.33389	17.015	16.898	17.232	-0.48256	0.010959	5.3295E-05	NaN	136.27	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	261160			54537	2268	36382	36397							0.11629096151318663
SLIHPGAL	8	Unmodified	_SLIHPGAL_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1;nc|ENSG00000166783|Q9Y4F3-6|MARF1;ENST00000548216.2_1_16:15729470-15733102:-|nuORF	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2394104003906	2	404.239796	806.465038	0.22918	9.2645E-05	-0.081122	-3.2793E-05	0.14806	5.9853E-05	404.2395972702734	41.99	0.98602	41.959	41.583	42.569	-0.030991					45	23	3	0	0	0	0.94132	1	3116	3116		54.765	2.4655	1	631540			54538	6228	36383	36398	61779	61779					0.05406434559904483
SLIKQNNSY	9	Unmodified	_SLIKQNNSY_					0	0	0		ENSG00000197020|ENST00000358296|ZNF100	ENSG00000197020|ENST00000358296|ZNF100	ENSG00000197020|ENST00000358296|ZNF100	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.779541015625	2	533.780013	1065.54547	0.17776	9.4886E-05	-0.40425	-0.00021578	-0.22649	-0.0001209	533.7797939792696	38.597	0.59984	38.569	38.299	38.898	-0.027843					25	13	3	0	0	0	0.6204	1	2632	2632		45.972	5.1941	1	138490			54539	8124	36384	36399	61780	61780					0.015322510922715082
SLILCFYHVS	10	Unmodified	_SLILCFYHVS_					0	0	0			REV__nc|ENSG00000010318|Q9BWX1-2|PHF7	REV__nc|ENSG00000010318|Q9BWX1-2|PHF7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.3341064453125	2	591.30481	1180.59507	-0.093175	-5.5095E-05	2.8698	0.001697	2.7767	0.0016419	591.3064601130029	77.953	0.74204	78.516	78.295	79.037	0.56332					28	17	3	0	0	0	0.37624	1	8983	8983		10.265	0	1	208630	+		54540	16163	36385	36400	61781	61781					0.011992427767381741
SLILNKLILY	10	Unmodified	_SLILNKLILY_					0	0	0			REV__L1M4_dup6019|chr5:141110922-141111363:+|1.839789626188877|0.0673205306865507|4.77|63.0|8|2|sense	REV__L1M4_dup6019|chr5:141110922-141111363:+|1.839789626188877|0.0673205306865507|4.77|63.0|8|2|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.8005981445312	2	595.381374	1188.7482	-0.15118	-9.0009E-05	-2.2841	-0.0013599	-2.4352	-0.0014499	595.8823478750368	80.754	0.25026	81.175	81.018	81.268	0.4215					7	5	2	0	0	0	0.37624	1	9275	9275		26.693	0	1	54955	+		54541	29458	36386	36401	61782	61782					0.16137181164867798
SLILRGLVE	9	Unmodified	_SLILRGLVE_					0	0	0			REV__ENST00000473314.6_1_1:25664145-25664286:-|nuORF	REV__ENST00000473314.6_1_1:25664145-25664286:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.3131103515625	2	500.313492	998.612431	0.60375	0.00030207	-0.30238	-0.00015128	0.30138	0.00015078	500.3130487867207	78.718	0.69824	78.857	78.489	79.187	0.13883					40	18	3	0	0	0	0.36616	1	7429	7429		60.118	0	1	179210	+		54542	27282	36387	36402	61783	61783					0.11306906374034043
SLINQLALLLL	11	Unmodified	_SLINQLALLLL_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1;ENST00000469614.1_1_7:4828357-4829561:+|nuORF	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.8942260742188	2	605.892106	1209.76966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.212	1	47.202	46.702	47.702	-0.0093269								0	0	0	0.56276	1	3831	3831		31.53	3.6476	1				54543	8802	36388	36403	61784	61784					0.1731656619356272
SLIPQIKQEKR	11	Unmodified	_SLIPQIKQEKR_					0	0	0		ENSG00000135999|ENST00000258484|EPC2;ENST00000491099.1_1_2:149511519-149519500:+|nuORF	ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	447.6070556640625	3	447.273388	1338.79833	1.515	0.0006776	-2.5639	-0.0011468	-1.0489	-0.00046917	447.27217473102263	103.89	0.95638	103.93	103.51	104.47	0.041481					41	22	2	0	0	0	0.75457	1	11302	11302		21.032	1.7696	1	361040			54544	4077	36389	36404	61785	61785					0.1424868382268869
SLIPQIKQEKR	11	Unmodified	_SLIPQIKQEKR_					0	0	0		ENSG00000135999|ENST00000258484|EPC2;ENST00000491099.1_1_2:149511519-149519500:+|nuORF	ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	447.273388	1338.79833	-0.14525	-6.4967E-05	-1.0029	-0.00044858	-1.1482	-0.00051354	447.2728236974791	104.09	1.2948	104.09	103.78	105.08	-0.0035706	0.01139	0.0009591	NaN	21.032	39	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89399			54545	4077	36389	36404							0.1424868382268869
SLIPQIKQEKR	11	Unmodified	_SLIPQIKQEKR_					0	0	0		ENSG00000135999|ENST00000258484|EPC2;ENST00000491099.1_1_2:149511519-149519500:+|nuORF	ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	447.273388	1338.79833	2.747	0.0012286	-3.8348	-0.0017152	-1.0878	-0.00048654	447.27161858928014	104.13	3.0475	104.08	103.6	106.65	-0.043755	0.0063829	-0.0028407	NaN	21.032	120	72	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	407250			54546	4077	36389	36404							0.1424868382268869
SLIPQIKQEKR	11	Unmodified	_SLIPQIKQEKR_					0	0	0		ENSG00000135999|ENST00000258484|EPC2;ENST00000491099.1_1_2:149511519-149519500:+|nuORF	ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	447.273388	1338.79833	-1.2892	-0.00057662	0.53146	0.00023771	-0.75772	-0.00033891	447.2735020160786	103.93	2.6748	104.1	103.49	106.17	0.17095	0.027216	0.003018	NaN	21.032	117	67	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252880			54547	4077	36389	36404							0.1424868382268869
SLIPQIKQEKR	11	Unmodified	_SLIPQIKQEKR_					0	0	0		ENSG00000135999|ENST00000258484|EPC2;ENST00000491099.1_1_2:149511519-149519500:+|nuORF	ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	447.273388	1338.79833	0.74975	0.00033534	-1.7383	-0.0007775	-0.98856	-0.00044216	447.2725324474821	103.99	2.7993	104.11	103.74	106.54	0.11685	0.031781	-2.7666E-05	NaN	21.032	124	69	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	570340			54548	4077	36389	36404							0.1424868382268869
SLIPQIKQEKR	11	Unmodified	_SLIPQIKQEKR_					0	0	0		ENSG00000135999|ENST00000258484|EPC2;ENST00000491099.1_1_2:149511519-149519500:+|nuORF	ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	447.273388	1338.79833	-1.7854	-0.00079857	0.90455	0.00040458	-0.88086	-0.00039399	447.2736740756038	104.06	2.2686	104.15	103.55	105.82	0.093857	0.072326	0.0035186	NaN	21.032	107	56	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	337440			54549	4077	36389	36404							0.1424868382268869
SLIRKFRLFPR	11	Unmodified	_SLIRKFRLFPR_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.6373291015625	3	478.301501	1431.88267	-0.88095	-0.00042136	3.5933	0.0017187	2.7123	0.0012973	478.30312855267334	66.875	1.0299	67.008	66.517	67.547	0.13326					107	42	3	0	0	0	0.79945	1	5985	5985		11.455	1.8085	1	324080			54550	1679	36390	36405	61786	61786					0.18400679430101263
SLIRRTEGT	9	Unmodified	_SLIRRTEGT_					0	0	0			REV__ENSG00000105429|ENST00000251268|MEGF8	REV__ENSG00000105429|ENST00000251268|MEGF8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.79345703125	2	516.793455	1031.57236	0.82179	0.0004247	-0.75095	-0.00038809	0.070838	3.6609E-05	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.7932	1	8978	8978		26.693	1.2427	1	858640	+		54551	17539	36391	36406	61787	61787					0.057833597034687045
SLITLRFYNKV	11	Unmodified	_SLITLRFYNKV_					0	0	0			REV__ENSG00000172031|ENST00000370383|EPHX4	REV__ENSG00000172031|ENST00000370383|EPHX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9329528808594	3	451.934484	1352.78162	-1.2099	-0.00054677	-2.7663	-0.0012502	-3.9762	-0.001797	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.72374	2	10459	10448;10459		27.644	5.8635	1	1176100	+		54552	21797	36392	36407	61788;61789	61789					0.11934182936715843
SLITNTRTKH	10	Unmodified	_SLITNTRTKH_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.8289794921875	2	585.833111	1169.65167	-0.90054	-0.00052756	-4.4248	-0.0025922	-5.3253	-0.0031198	585.8305105735789	59.591	0.89731	59.591	59.162	60.06	0					55	35	2	0	0	0	0.86698	1	5191	5191		28.081	0.19925	1	110350	+		54553	22085	36393	36408	61790	61790					0.07363006657601545
SLIVELIEP	9	Unmodified	_SLIVELIEP_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8006591796875	2	506.799883	1011.58521	-0.048814	-2.4739E-05	2.2782	0.0011546	2.2294	0.0011298	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.78058	1	3187	3187		30.504	7.4612	1	475290	+		54554	20414	36394	36409	61791	61791					0.0798837804301229
SLKKLGTS	8	Unmodified	_SLKKLGTS_					0	0	0			REV__nc|ENSG00000131016|Q02952-2|AKAP12	REV__nc|ENSG00000131016|Q02952-2|AKAP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.25811767578125	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.80308	1	518	518		16.473	0.83134	1	867930	+		54555	29841	36395	36410	61792	61792					0.07886686385825215
SLKKLSAS	8	Unmodified	_SLKKLSAS_					0	0	0		chr17:61050258-61074920|14|13.93|0.0|20.41|+|2|TE_info:L1MEc,L1MEc_dup16651,L1,LINE,donor,+,61050033,61050258|None,BCAS3|4	chr17:61050258-61074920|14|13.93|0.0|20.41|+|2|TE_info:L1MEc,L1MEc_dup16651,L1,LINE,donor,+,61050033,61050258|None,BCAS3|4	chr17:61050258-61074920|14|13.93|0.0|20.41|+|2|TE_info:L1MEc,L1MEc_dup16651,L1,LINE,donor,+,61050033,61050258|None,BCAS3|4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2587585449219	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.8347	1	894	894		23.042	6.5693	1	1763000			54556	236	36396	36411	61793	61793					0.07886686385813846
SLKKWGKK	8	Unmodified	_SLKKWGKK_					0	0	0		ENST00000336314.8_2_5:154193974-154194505:+|nuORF	ENST00000336314.8_2_5:154193974-154194505:+|nuORF	ENST00000336314.8_2_5:154193974-154194505:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.958740234375	2	487.810919	973.607286	-0.98484	-0.00048042	-3.1076	-0.0015159	-4.0925	-0.0019964	487.8092546733945	102.5	0.57909	102.54	102.3	102.88	0.043198					24	13	3	0	0	0	0.4196	1	11118	11118		12.207	9.0476	1	114760			54557	10171	36397	36412	61794	61794					0.11942647302078058
SLKLKPSAM	9	Unmodified	_SLKLKPSAM_					0	0	0			REV__nc|ENSG00000163939|Q86U86-7|PBRM1	REV__nc|ENSG00000163939|Q86U86-7|PBRM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7907409667969	2	487.788795	973.563038	-0.71212	-0.00034736	4.1832	0.0020405	3.4711	0.0016932	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.77244	1	7923	7923		32.812	4.9302	1	678280	+		54558	21000	36398	36413	61795	61795					0.07519875093578321
SLKNFFAM	8	Unmodified	_SLKNFFAM_					0	0	0		nc|ENSG00000156414|Q8NDG6-2|TDRD9;ENSG00000156414|ENST00000409874|TDRD9	nc|ENSG00000156414|Q8NDG6-2|TDRD9	nc|ENSG00000156414|Q8NDG6-2|TDRD9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774353027344	2	479.246763	956.478974	-0.83666	-0.00040097	0.65894	0.0003158	-0.17772	-8.5172E-05	479.2473004346087	84.032	0.42863	84.197	84.092	84.52	0.1651					12	9	2	0	0	0	0.4196	1	8158	8158		31.955	0	1	52030			54559	5377	36399	36414	61796	61796					-0.0010065600331472524
SLKNRILN	8	Unmodified	_SLKNRILN_					0	0	0		nc|ENSG00000175556|Q496Y0-2|LONRF3;ENSG00000175556|ENST00000371628|LONRF3;ENST00000481285.5_1_X:118146936-118151650:+|nuORF	nc|ENSG00000175556|Q496Y0-2|LONRF3	nc|ENSG00000175556|Q496Y0-2|LONRF3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774353027344	2	479.295633	956.576714	-0.83633	-0.00040085	-3.6477	-0.0017483	-4.484	-0.0021492	479.29458144705916	83.716	0.89849	83.881	83.493	84.391	0.1651					28	20	2	0	0	0	0.4196	1	8158	8158		23.042	0	1	95504			54560	7025	36400	36415	61797	61797					0.0966886891702643
SLKPNIKM	8	Unmodified	_SLKPNIKM_					0	0	0		ENST00000415659.2_1_5:122364834-122372365:-|nuORF	ENST00000415659.2_1_5:122364834-122372365:-|nuORF	ENST00000415659.2_1_5:122364834-122372365:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7776184082031	2	465.775688	929.536823	-0.1189	-5.538E-05	4.3164	0.0020105	4.1975	0.0019551	465.7775757816171	80.054	2.3346	80.117	78.422	80.756	0.062233					168	72	3	0	0	0	0.87479	1	7913	7913		30.504	6.3009	1	345200			54561	11383	36401	36416	61798	61798					0.06923605922111165
SLKPRRRMKKK	11	Unmodified	_SLKPRRRMKKK_					0	0	0		ENST00000423596.5_1_21:40834466-40883616:+|nuORF;ENST00000380637.7_1_21:40834409-40883616:+|nuORF	ENST00000423596.5_1_21:40834466-40883616:+|nuORF	ENST00000423596.5_1_21:40834466-40883616:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2468566894531	3	476.64164	1426.90309	-0.90799	-0.00043278	-0.22636	-0.00010789	-1.1344	-0.00054068	476.97577108878875	64.584	0.28877	65.138	64.896	65.185	0.55386					10	6	2	0	0	0	0.17955	1	6998	6998		12.957	1.0251	1	46263			54562	10927	36402	36417	61799	61799					0.20671526818227903
SLKPYNKVV	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SLKPYNKVV_					1	0	0			REV__ENST00000376958.4_1_13:95257758-95257800:+|nuORF	REV__ENST00000376958.4_1_13:95257758-95257800:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3169555664062	2	545.318774	1088.623	-1.4674	-0.00080021	-2.5132	-0.0013705	-3.9807	-0.0021707	545.3172916402864	93.375	2.3581	93.567	93.147	95.505	0.19239					96	56	3	0	0	0	0.69624	1	9444	9444		40.778	7.2626	1	1075700	+		54563	25849	36403	36418	61800	61800					0.08222889028479585
SLKQHPPLL	9	Unmodified	_SLKQHPPLL_					0	0	0		nc|ENSG00000166821|O75192-2|PEX11A;ENSG00000166821|ENST00000300056|PEX11A	nc|ENSG00000166821|O75192-2|PEX11A	nc|ENSG00000166821|O75192-2|PEX11A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3096923828125	2	516.813659	1031.61277	3.6047	0.0018629	-2.0183	-0.0010431	1.5863	0.00081983	517.3133699983491	104.46	1.2086	104.69	104.12	105.33	0.2268					44	28	2	0	0	0	0.20789	1	12766	12766		23.042	1.0826	1	66979			54564	6232	36404	36419	61801	61801					0.09822326093899392
SLKQTQEWV	9	Unmodified	_SLKQTQEWV_					0	0	0			REV__chr13:43055543-43068930|15|37.13|0.22|7.43|+|0|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|6	REV__chr13:43055543-43068930|15|37.13|0.22|7.43|+|0|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	559.7964477539062	2	559.795663	1117.57677	0.11611	6.4997E-05	-3.9559	-0.0022145	-3.8398	-0.0021495	559.79331126822	32.279	0.43787	32.225	31.963	32.401	-0.05434					16	9	2	0	0	0	0.7932	1	1877	1877		26.693	2.1737	1	57513	+		54565	15572	36405	36420	61802	61802					0.022688241263722375
SLKRAKTLD	9	Unmodified	_SLKRAKTLD_					0	0	0			REV__ENSG00000283528|ENST00000636941|TCAF2C	REV__ENSG00000283528|ENST00000636941|TCAF2C	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3156127929688	2	516.314023	1030.61349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	120.01	1	119.88	119.38	120.38	-0.12807								0	0	0	0.32022	1	12971	12971		23.523	0	1		+		54566	21652	36406	36421	61803	61803					0.09941120742928433
SLKRDTKAI	9	Unmodified	_SLKRDTKAI_					0	0	0		nc|ENSG00000105982|Q9H0A6-2|RNF32;ENSG00000105982|ENST00000317955|RNF32;nc|ENSG00000105982|Q9H0A6-6|RNF32;ENST00000469382.1_1_7:156436571-156447430:+|nuORF;nc|ENSG00000105982|Q9H0A6-5|RNF32;nc|ENSG00000105982|Q9H0A6-4|RNF32	nc|ENSG00000105982|Q9H0A6-2|RNF32	nc|ENSG00000105982|Q9H0A6-2|RNF32	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3150634765625	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.78528	1	12560	12560		29.17	0.020503	1	4038100			54567	2270	36407	36422	61804	61804					0.09941120742928433
SLKRRCIR	8	Unmodified	_SLKRRCIR_					0	0	0		chr21:17604997-17607606|18|16.56|0.82|4.33|-|1|BTG3,None|1	chr21:17604997-17607606|18|16.56|0.82|4.33|-|1|BTG3,None|1	chr21:17604997-17607606|18|16.56|0.82|4.33|-|1|BTG3,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3141479492188	2	516.316377	1030.6182	-0.25527	-0.0001318	-4.0979	-0.0021158	-4.3532	-0.0022476	516.3141964907301	102.01	1.1313	102.2	101.89	103.02	0.19484					90	27	4	0	0	0	0.86288	1	10816	10816		26.796	3.7536	1	1199700			54568	371	36408	36423	61805	61805					0.10411726404709043
SLKRSLVHL	9	Unmodified	_SLKRSLVHL_					0	0	0		ENSG00000076201|ENST00000265562|PTPN23	ENSG00000076201|ENST00000265562|PTPN23	ENSG00000076201|ENST00000265562|PTPN23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.8311767578125	2	526.832383	1051.65021	-0.63369	-0.00033385	-1.7948	-0.00094557	-2.4285	-0.0012794	526.8314539429292	99.046	1.7562	99.046	98.528	100.28	0					92	42	3	0	0	0	0.78058	1	9975	9975		30.504	0	1	488410			54569	1352	36409	36424	61806	61806					0.12645417359499334
SLKSLVATG	9	Unmodified	_SLKSLVATG_					0	0	0		ENST00000484476.5_1_1:25889538-25893480:+|nuORF;ENST00000488127.1_1_1:25880414-25890333:+|nuORF;ENSG00000157978|ENST00000374338|LDLRAP1	ENST00000484476.5_1_1:25889538-25893480:+|nuORF	ENST00000484476.5_1_1:25889538-25893480:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2622375488281	2	438.263468	874.512382	0.037237	1.632E-05	-0.30418	-0.00013331	-0.26694	-0.00011699	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.7932	1	2149	2149		20.947	0.4651	1	10667000			54570	5453	36410	36425	61807	61807					0.07010669040221273
SLKSRRPNWPL	11	Unmodified	_SLKSRRPNWPL_					0	0	0			REV__ENST00000216489.7_1_14:78139965-78140151:-|nuORF	REV__ENST00000216489.7_1_14:78139965-78140151:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9327697753906	3	451.929844	1352.7677	2.5866	0.001169	3.6676	0.0016575	6.2542	0.0028264	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.72892	1	10937	10937		26.75	4.9693	1	1152500	+		54571	24136	36411	36426	61808	61808					0.1054295022831866
SLKSYPIGF	9	Unmodified	_SLKSYPIGF_					0	0	0			REV__ENSG00000188522|ENST00000388995|FAM83G	REV__ENSG00000188522|ENST00000388995|FAM83G	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.2947998046875	2	506.279118	1010.54368	-1.5945	-0.00080727	0.85014	0.00043041	-0.74437	-0.00037686	506.28036567245346	97.423	1.4206	97.625	97.096	98.516	0.20207					62	32	3	0	0	0	0.20789	1	10080	10080		15.642	0	1	65836	+		54572	23007	36412	36427	61809	61809					0.03883242074334703
SLKWRLIKIWE	11	Unmodified	_SLKWRLIKIWE_					0	0	0			REV__ENST00000514301.1_1_4:100787149-100789339:+|nuORF	REV__ENST00000514301.1_1_4:100787149-100789339:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.299072265625	3	491.297645	1470.87111	2.8436	0.001397	0.12355	6.0698E-05	2.9671	0.0014577	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.81219	1	13153	13153		8.7993	2.7983	1	3274400	+		54573	16598	36413	36428	61810	61810					0.15450437616118506
SLKWRLIKIWE	11	Unmodified	_SLKWRLIKIWE_					0	0	0			REV__ENST00000514301.1_1_4:100787149-100789339:+|nuORF	REV__ENST00000514301.1_1_4:100787149-100789339:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.300048828125	3	491.297645	1470.87111	-0.62705	-0.00030807	3.2135	0.0015788	2.5865	0.0012707	491.2990736869804	110.17	1.4737	110.28	110.04	111.52	0.11659					96	54	2	0	0	0	0.80593	1	11981	11981		10.104	3.783	1	713080	+		54574	16598	36413	36428	61811	61811					0.15450437616118506
SLKYKTAILN	10	Unmodified	_SLKYKTAILN_					0	0	0		ENST00000341423.9_1_13:31034336-31034576:-|nuORF	ENST00000341423.9_1_13:31034336-31034576:-|nuORF	ENST00000341423.9_1_13:31034336-31034576:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8434448242188	2	575.845156	1149.67576	-0.49921	-0.00028747	-3.2743	-0.0018855	-3.7735	-0.002173	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.86047	1	8757	8757		23.523	0.48021	1	1518700			54575	10248	36414	36429	61812	61812					0.10690847091291289
SLLACEGL	8	Unmodified	_SLLACEGL_					0	0	0		ENSG00000139651|ENST00000416904|ZNF740	ENSG00000139651|ENST00000416904|ZNF740	ENSG00000139651|ENST00000416904|ZNF740	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.20892333984375	2	403.209847	804.40514	-0.60775	-0.00024505	-1.7885	-0.00072113	-2.3962	-0.00096618	403.2090521764512	85.615	1.3902	86.062	85.664	87.054	0.44736					79	33	4	0	0	0	0.85277	1	10020	10020		25.45	3.7478	1	1223100			54576	4388	36415	36430	61813	61813					-0.004886241656436141
SLLASGRAP	9	Unmodified	_SLLASGRAP_					0	0	0		nc|ENSG00000165283|Q9UJZ1-2|STOML2;ENSG00000165283|ENST00000356493|STOML2	nc|ENSG00000165283|Q9UJZ1-2|STOML2	nc|ENSG00000165283|Q9UJZ1-2|STOML2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.25439453125	2	436.253434	870.492316	0.73685	0.00032145	2.2612	0.00098647	2.9981	0.0013079	436.25437799492886	109.98	0.6684	110.05	109.85	110.52	0.073685					29	23	2	0	0	0	0.7932	1	11823	11823		26.693	1.2427	1	1402700			54577	6068	36416	36431	61814	61814					0.051889181002820806
SLLAWTLLL	9	Unmodified	_SLLAWTLLL_					0	0	0		nc|ENSG00000288640|O00458-2|IFRD1;ENSG00000006652|ENST00000403825|IFRD1;ENST00000466459.5_1_7:112097053-112108063:+|nuORF	nc|ENSG00000288640|O00458-2|IFRD1	nc|ENSG00000288640|O00458-2|IFRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.321044921875	2	515.320786	1028.62702	-0.72959	-0.00037597	0.70913	0.00036543	-0.020459	-1.0543E-05	515.3210227492417	72.675	0.74564	73.061	72.708	73.454	0.38581					41	17	3	0	0	0	0.43338	1	8109	8109		55.504	0	1	625100			54578	707	36417	36432	61815	61815					0.11384978522187339
SLLDKIIGA	9	Unmodified	_SLLDKIIGA_					0	0	0		nc|ENSG00000177469|Q6NZI2-2|CAVIN1;ENSG00000177469|ENST00000357037|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.286865234375	2	465.286943	928.559333	-1.054	-0.00049039	1.3099	0.00060948	0.25595	0.00011909	465.28739467159795	77.149	0.82399	77.274	77.018	77.842	0.12486					104	39	4	0	0	0	0.076066	7	7234	7212;7218;7225;7234;7255;7265;7272		98.582	5.3889	1	1610000			54579	7143	36418	36433	61816;61817;61818;61819;61820;61821;61822	61819					0.09219528591370363
SLLDKIIGA	9	Unmodified	_SLLDKIIGA_					0	0	0		nc|ENSG00000177469|Q6NZI2-2|CAVIN1;ENSG00000177469|ENST00000357037|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.2867431640625	2	465.286943	928.559333	0.55544	0.00025844	-0.35227	-0.00016391	0.20317	9.4533E-05	465.28665991732896	77.113	1.0041	77.248	76.927	77.932	0.13478					108	48	3	0	0	0	0.034797	7	7242	7215;7222;7228;7242;7248;7255;7265		115.49	8.4865	1	1591900			54580	7143	36418	36433	61823;61824;61825;61826;61827;61828;61829	61826					0.09219528591370363
SLLDKIIGA	9	Unmodified	_SLLDKIIGA_					0	0	0		nc|ENSG00000177469|Q6NZI2-2|CAVIN1;ENSG00000177469|ENST00000357037|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.2867126464844	2	465.286943	928.559333	-1.3462	-0.00062637	1.5269	0.00071045	0.18069	8.4074E-05	465.28751849052463	77.21	0.82004	77.301	76.982	77.802	0.091438					97	41	3	0	0	0	0.034797	4	7228	7191;7205;7210;7228		115.49	16.302	1	1491000			54581	7143	36418	36433	61830;61831;61832;61833	61833					0.09219528591370363
SLLDKIIGA	9	Unmodified	_SLLDKIIGA_					0	0	0		nc|ENSG00000177469|Q6NZI2-2|CAVIN1;ENSG00000177469|ENST00000357037|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	465.286943	928.559333	-0.064668	-3.0089E-05	0.52618	0.00024482	0.46151	0.00021473	465.2871112609773	77.36	0.28636	77.309	77.13	77.417	-0.050789	0.04467	-5.0545E-05	NaN	115.49	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76584			54582	7143	36418	36433							0.09219528591370363
SLLDKIIGA	9	Unmodified	_SLLDKIIGA_					0	0	0		nc|ENSG00000177469|Q6NZI2-2|CAVIN1;ENSG00000177469|ENST00000357037|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	nc|ENSG00000177469|Q6NZI2-2|CAVIN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	465.286943	928.559333	-0.3778	-0.00017579	0.82662	0.00038462	0.44882	0.00020883	465.2873617412707	77.142	0.29146	77.19	77.155	77.446	0.047981	-0.074732	0.00022904	NaN	115.49	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113110			54583	7143	36418	36433							0.09219528591370363
SLLDKTLEI	9	Unmodified	_SLLDKTLEI_					0	0	0			REV__ENST00000460483.5_1_10:112057460-112064550:-|nuORF	REV__ENST00000460483.5_1_10:112057460-112064550:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3058471679688	2	516.30279	1030.59103	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.441	1	62.407	61.907	62.907	-0.033173								0	0	0	0.36353	1	5909	5909		49.442	0	1		+		54584	18390	36419	36434	61834	61834					0.07695476554658853
SLLDLENGRR	10	Unmodified	_SLLDLENGRR_					0	0	0		ENSG00000118898|ENST00000345988|PPL	ENSG00000118898|ENST00000345988|PPL	ENSG00000118898|ENST00000345988|PPL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.823974609375	2	586.822744	1171.63093	-0.26066	-0.00015296	2.0511	0.0012036	1.7905	0.0010507	586.8238105998267	110.35	1.3355	110.35	110.09	111.43	0					132	40	5	0	0	0	0.86348	1	11487	11487		31.53	3.6476	1	4860400			54585	3047	36420	36435	61835	61835					0.05198416277949036
SLLDQLLK	8	Unmodified	_SLLDQLLK_					0	0	0			REV__nc|ENSG00000174672|Q8IWQ3-6|BRSK2	REV__nc|ENSG00000174672|Q8IWQ3-6|BRSK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.2869567871094	2	465.286943	928.559333	-1.054	-0.00049039	1.3099	0.00060948	0.25595	0.00011909	465.28739467159795	77.149	0.82399	77.274	77.018	77.842	0.12486					104	39	4	0	0	0	0.081896	1	7247	7247		122.18	0	1	1610000	+		54586	22007	36421	36436	61836	61836					0.09219528591381732
SLLDQLLK	8	Unmodified	_SLLDQLLK_					0	0	0			REV__nc|ENSG00000174672|Q8IWQ3-6|BRSK2	REV__nc|ENSG00000174672|Q8IWQ3-6|BRSK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.2867126464844	2	465.286943	928.559333	-1.3462	-0.00062637	1.5269	0.00071045	0.18069	8.4074E-05	465.28751849052463	77.21	0.82004	77.301	76.982	77.802	0.091438					97	41	3	0	0	0	0.37281	1	7197	7197		87.696	0	1	1491000	+		54587	22007	36421	36436	61837	61837					0.09219528591381732
SLLERLEKI	9	Unmodified	_SLLERLEKI_					0	0	0		nc|ENSG00000160299|O95613-2|PCNT;ENSG00000160299|ENST00000359568|PCNT	nc|ENSG00000160299|O95613-2|PCNT	nc|ENSG00000160299|O95613-2|PCNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.8392944335938	2	550.837331	1099.66011	0.15138	8.3386E-05	0.36583	0.00020151	0.51721	0.0002849	550.8375159080202	24.2	0.63874	24.255	23.869	24.508	0.055487					29	14	3	0	0	0	0.77696	1	859	859		31.53	0	1	51828			54588	5577	36422	36437	61838	61838					0.11426560574250288
SLLFQSVSQL	10	Unmodified	_SLLFQSVSQL_					0	0	0			REV__nc|ENSG00000137709|Q9UKI9-3|POU2F3	REV__nc|ENSG00000137709|Q9UKI9-3|POU2F3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	561.3128051757812	2	561.313689	1120.61282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.461	1	69.59	69.09	70.09	0.1291								0	0	0	0.45132	1	6290	6290		19.997	1.6724	1		+		54589	19401	36423	36438	61839	61839					0.05734281303261923
SLLFVQKGR	9	Unmodified	_SLLFVQKGR_					0	0	0		ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.72021484375	2	524.319109	1046.62366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.496	1	63.463	62.963	63.963	-0.033714								0	0	0	0.29134	1	6026	6026		34.173	5.023	1				54590	6887	36424	36439	61840	61840					0.10221728468172842
SLLGARLYW	9	Unmodified	_SLLGARLYW_					0	0	0		ENST00000551915.5_1_12:83081308-83379891:+|nuORF;ENSG00000179104|ENST00000321196|TMTC2	ENST00000551915.5_1_12:83081308-83379891:+|nuORF	ENST00000551915.5_1_12:83081308-83379891:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.8030395507812	2	539.805834	1077.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.82	1	114.92	114.42	115.42	0.098114								0	0	0	0.35896	1	12268	12268		12.207	0	1				54591	7243	36425	36440	61841	61841					0.06142039576843672
SLLGAVGLMAG	11	Unmodified	_SLLGAVGLMAG_					0	0	0			REV__nc|ENSG00000291317|P0DTL5|TMEM276	REV__nc|ENSG00000291317|P0DTL5|TMEM276	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7797546386719	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.983	1	84.131	83.631	84.631	0.14793								0	0	0	0.56276	1	8158	8158		34.173	1.3601	1		+		54592	30305	36426	36441	61842	61842					0.048032847139324986
SLLGFEHM	8	Unmodified	_SLLGFEHM_					0	0	0		ENST00000506531.5_1_11:67057839-67066817:+|nuORF;nc|ENSG00000172932|Q6ZTN6-1|ANKRD13D;ENSG00000172932|ENST00000511455|ANKRD13D	ENST00000506531.5_1_11:67057839-67066817:+|nuORF	ENST00000506531.5_1_11:67057839-67066817:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.2300720214844	2	467.228571	932.442588	-0.2993	-0.00013984	3.2323	0.0015102	2.933	0.0013704	467.2299347648455	24.431	1.1398	24.385	23.796	24.936	-0.04598					52	25	3	0	0	0	0.84634	1	930	930		60.294	1.512	1	349350			54593	6804	36427	36442	61843	61843					-0.026335329000289676
SLLGKMIIEPP	11	Oxidation (M)	_SLLGKM(Oxidation (M))IIEPP_		SLLGKM(1)IIEPP		SLLGKM(46)IIEPP	0	0	1			REV__ENSG00000133119|ENST00000380071|RFC3	REV__ENSG00000133119|ENST00000380071|RFC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	607.3487548828125	2	607.346674	1212.6788	0.46338	0.00028143	2.9709	0.0018044	3.4343	0.0020858	607.3483457328194	29.878	0.69024	29.788	29.489	30.179	-0.089544					33	15	3	0	0	0	0.57736	1	1928	1928		46.457	14.823	1	501150	+		54594	19061	36428	36443	61844	61844		279			0.08096354153758512
SLLGKMIIEPP	11	Oxidation (M)	_SLLGKM(Oxidation (M))IIEPP_					0	0	1			REV__ENSG00000133119|ENST00000380071|RFC3	REV__ENSG00000133119|ENST00000380071|RFC3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	607.346674	1212.6788	-0.077862	-4.7289E-05	3.2955	0.0020015	3.2176	0.0019542	607.3486281453621	29.943	0.41317	29.968	29.762	30.175	0.025013	0.090734	-0.0002939	NaN	46.457	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25577	+		54595	19061	36428	36443				279			0.08096354153758512
SLLGKMIIEPP	11	Oxidation (M)	_SLLGKM(Oxidation (M))IIEPP_					0	0	1			REV__ENSG00000133119|ENST00000380071|RFC3	REV__ENSG00000133119|ENST00000380071|RFC3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	607.346674	1212.6788	0.10638	6.4609E-05	3.8023	0.0023093	3.9087	0.0023739	607.3487608256814	29.927	0.50536	29.884	29.679	30.185	-0.043093	0.0058235	0.00032175	NaN	46.457	18	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33971	+		54596	19061	36428	36443				279			0.08096354153758512
SLLGKMIIEPP	11	Oxidation (M)	_SLLGKM(Oxidation (M))IIEPP_					0	0	1			REV__ENSG00000133119|ENST00000380071|RFC3	REV__ENSG00000133119|ENST00000380071|RFC3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	607.346674	1212.6788	-0.42816	-0.00026004	3.7187	0.0022585	3.2905	0.0019985	607.3489007504406	29.922	0.45675	29.907	29.625	30.082	-0.015167	0.02947	0.0002201	NaN	46.457	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32189	+		54597	19061	36428	36443				279			0.08096354153758512
SLLGKMIIEPP	11	Oxidation (M)	_SLLGKM(Oxidation (M))IIEPP_					0	0	1			REV__ENSG00000133119|ENST00000380071|RFC3	REV__ENSG00000133119|ENST00000380071|RFC3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	607.346674	1212.6788	-0.41743	-0.00025352	3.7506	0.0022779	3.3332	0.0020244	607.3487229250911	29.651	1.0493	29.622	29.343	30.392	-0.029207	-0.25559	0.00025894	NaN	46.457	45	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	430000	+		54598	19061	36428	36443				279			0.08096354153758512
SLLGKMIIEPP	11	Oxidation (M)	_SLLGKM(Oxidation (M))IIEPP_					0	0	1			REV__ENSG00000133119|ENST00000380071|RFC3	REV__ENSG00000133119|ENST00000380071|RFC3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	607.346674	1212.6788	0.46338	0.00028143	2.9709	0.0018044	3.4343	0.0020858	607.3483457328194	29.878	0.69024	29.788	29.489	30.179	-0.089544	-0.089643	-0.00068816	NaN	46.457	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	501150	+		54599	19061	36428	36443				279			0.08096354153758512
SLLGPILSCV	10	Unmodified	_SLLGPILSCV_					0	0	0		nc|ENSG00000138617|Q8N5Y8-2|PARP16;ENSG00000138617|ENST00000649807|PARP16;nc|ENSG00000138617|Q8N5Y8-3|PARP16	nc|ENSG00000138617|Q8N5Y8-2|PARP16	nc|ENSG00000138617|Q8N5Y8-2|PARP16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2901916503906	2	501.288628	1000.5627	-0.064942	-3.2555E-05	3.6163	0.0018128	3.5513	0.0017802	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.8608	1	8505	8505		34.173	2.6427	1	2854100			54600	4308	36429	36444	61845	61845					0.06244455373735036
SLLGPILSCV	10	Unmodified	_SLLGPILSCV_					0	0	0		nc|ENSG00000138617|Q8N5Y8-2|PARP16;ENSG00000138617|ENST00000649807|PARP16;nc|ENSG00000138617|Q8N5Y8-3|PARP16	nc|ENSG00000138617|Q8N5Y8-2|PARP16	nc|ENSG00000138617|Q8N5Y8-2|PARP16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2902526855469	2	501.288628	1000.5627	1.1291	0.00056599	2.4986	0.0012525	3.6277	0.0018185	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.8608	1	8980	8980		34.173	2.2177	1	9883700			54601	4308	36429	36444	61846	61846					0.06244455373735036
SLLGPILSCV	10	Unmodified	_SLLGPILSCV_					0	0	0		nc|ENSG00000138617|Q8N5Y8-2|PARP16;ENSG00000138617|ENST00000649807|PARP16;nc|ENSG00000138617|Q8N5Y8-3|PARP16	nc|ENSG00000138617|Q8N5Y8-2|PARP16	nc|ENSG00000138617|Q8N5Y8-2|PARP16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2906188964844	2	501.288628	1000.5627	0.65623	0.00032896	2.7707	0.0013889	3.4269	0.0017179	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.86718	1	8343	8343		27.882	0	1	2931000			54602	4308	36429	36444	61847	61847					0.06244455373735036
SLLGPILSCV	10	Unmodified	_SLLGPILSCV_					0	0	0		nc|ENSG00000138617|Q8N5Y8-2|PARP16;ENSG00000138617|ENST00000649807|PARP16;nc|ENSG00000138617|Q8N5Y8-3|PARP16	nc|ENSG00000138617|Q8N5Y8-2|PARP16	nc|ENSG00000138617|Q8N5Y8-2|PARP16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29022216796875	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.85934	1	8789	8789		35.618	4.0885	1	9566900			54603	4308	36429	36444	61848	61848					0.06244455373735036
SLLGPILSCV	10	Unmodified	_SLLGPILSCV_					0	0	0		nc|ENSG00000138617|Q8N5Y8-2|PARP16;ENSG00000138617|ENST00000649807|PARP16;nc|ENSG00000138617|Q8N5Y8-3|PARP16	nc|ENSG00000138617|Q8N5Y8-2|PARP16	nc|ENSG00000138617|Q8N5Y8-2|PARP16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29052734375	2	501.288628	1000.5627	-0.28392	-0.00014233	3.869	0.0019395	3.5851	0.0017972	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.85934	1	9933	9933		35.618	0	1	9038000			54604	4308	36429	36444	61849	61849					0.06244455373735036
SLLGSLFRLFV	11	Unmodified	_SLLGSLFRLFV_					0	0	0			REV__nc|ENSG00000167984|Q7RTR2-3|NLRC3	REV__nc|ENSG00000167984|Q7RTR2-3|NLRC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.379638671875	2	626.376623	1250.73869	0.93844	0.00058782	3.1217	0.0019554	4.0601	0.0025432	626.3785118718172	107.88	0.41002	107.92	107.56	107.97	0.035622					35	9	4	0	0	0	0.62614	1	11846	11846		41.427	6.2746	1	11949000	+		54605	21445	36430	36445	61850	61850					0.123354128793153
SLLGSLFRLFV	11	Unmodified	_SLLGSLFRLFV_					0	0	0			REV__nc|ENSG00000167984|Q7RTR2-3|NLRC3	REV__nc|ENSG00000167984|Q7RTR2-3|NLRC3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3282470703125	2	626.376623	1250.73869	-0.28764	-0.00018017	1.518	0.00095085	1.2304	0.00077067	626.377430155103	55.239	0.61298	55.266	55.072	55.685	0.027142					21	14	2	0	0	0	0.17648	1	4935	4935		23.523	6.1577	1	63505	+		54606	21445	36430	36445	61851	61851					0.123354128793153
SLLGSLFRLFV	11	Unmodified	_SLLGSLFRLFV_					0	0	0			REV__nc|ENSG00000167984|Q7RTR2-3|NLRC3	REV__nc|ENSG00000167984|Q7RTR2-3|NLRC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.37939453125	2	626.376623	1250.73869	2.0982	0.0013142	2.7522	0.0017239	4.8504	0.0030381	626.3782628803294	105.51	2.7267	105.67	104.93	107.65	0.15583					187	94	2	0	0	0	0.65746	1	12872	12872		37.812	4.9991	1	2939000	+		54607	21445	36430	36445	61852	61852					0.123354128793153
SLLHKKIGM	9	Unmodified	_SLLHKKIGM_					0	0	0		nc|ENSG00000164627|Q6ZMV9-3|KIF6;ENSG00000164627|ENST00000287152|KIF6	nc|ENSG00000164627|Q6ZMV9-3|KIF6	nc|ENSG00000164627|Q6ZMV9-3|KIF6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8096923828125	2	513.810062	1025.60557	-0.22351	-0.00011484	-1.6255	-0.00083522	-1.8491	-0.00095006	513.8091977878661	50.938	0.75373	50.946	50.757	51.511	0.0077438					49	23	3	0	0	0	0.78058	1	4375	4375		30.504	2.6214	1	174420			54608	5982	36431	36446	61853	61853					0.09379270221825209
SLLILTSDL	9	Unmodified	_SLLILTSDL_					0	0	0			REV__ENST00000320486.6_1_9:98775493-98775565:+|nuORF	REV__ENST00000320486.6_1_9:98775493-98775565:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.791015625	2	487.792058	973.569563	-1.0855	-0.00052952	-2.0846	-0.0010168	-3.1701	-0.0015464	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.78058	1	7752	7752		30.504	1.3541	1	309700	+		54609	24999	36432	36447	61854	61854					0.08172091525955238
SLLIPGKP	8	Unmodified	_SLLIPGKP_					0	0	0			REV__ENSG00000132793|ENST00000373257|LPIN3	REV__ENSG00000132793|ENST00000373257|LPIN3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7662658691406	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.289	1	40.258	39.758	40.758	-0.030991								0	0	0	0.29755	1	2860	2860		24.203	0	1		+		54610	19033	36433	36448	61855	61855					0.09792178253815109
SLLITTALP	9	Unmodified	_SLLITTALP_					0	0	0			REV__ENST00000372133.7_1_6:43639307-43639502:-|nuORF	REV__ENST00000372133.7_1_6:43639307-43639502:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7910461425781	2	464.789318	927.564084	-1.1356	-0.00052781	3.8995	0.0018125	2.764	0.0012847	464.7910242247121	36.975	1.5496	36.999	36.145	37.695	0.023624					81	41	3	0	0	0	0.7932	1	2039	2039		20.947	0.95016	1	297830	+		54611	25708	36434	36449	61856	61856					0.09740412734117854
SLLITTALP	9	Unmodified	_SLLITTALP_					0	0	0			REV__ENST00000372133.7_1_6:43639307-43639502:-|nuORF	REV__ENST00000372133.7_1_6:43639307-43639502:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.79083251953125	2	464.789318	927.564084	0.090365	4.2E-05	2.7326	0.0012701	2.823	0.0013121	464.7905453409174	36.857	1.3586	36.797	35.976	37.335	-0.060333					62	38	2	0	0	0	0.7932	1	2059	2059		15.642	0.97771	1	232790	+		54612	25708	36434	36449	61857	61857					0.09740412734117854
SLLKKVGFEV	10	Unmodified	_SLLKKVGFEV_					0	0	0		nc|ENSG00000130638|Q9UBB4-2|ATXN10;ENSG00000130638|ENST00000252934|ATXN10	nc|ENSG00000130638|Q9UBB4-2|ATXN10	nc|ENSG00000130638|Q9UBB4-2|ATXN10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8408813476562	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.5809	-0.00088585	-2.9994	-0.0016807	560.3413072333456	113.14	0.23969	113.11	113.01	113.25	-0.032333					11	6	3	0	0	0	0.85981	1	12072	12072		35.152	2.3396	1	2440300			54613	3663	36435	36450	61858	61858					0.11535748579603933
SLLKSLVHFRL	11	Unmodified	_SLLKSLVHFRL_					0	0	0			REV__ENSG00000275700|ENST00000619387|AATF	REV__ENSG00000275700|ENST00000619387|AATF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2728271484375	3	438.27484	1311.80269	-1.4634	-0.00064136	-2.9517	-0.0012937	-4.4151	-0.001935	438.2734550831373	106.96	1.4325	107.1	106.6	108.03	0.14105					150	35	5	0	0	0	0.72892	1	11451	11451		26.75	1.6237	1	5372900	+		54614	24012	36436	36451	61859	61859					0.15926193036261793
SLLLEVVDT	9	Unmodified	_SLLLEVVDT_					0	0	0			REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7798156738281	2	494.78169	987.548827	-0.074951	-3.7084E-05	-2.5021	-0.001238	-2.577	-0.0012751	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.76255	1	8574	8574		35.618	0	1	651380	+		54615	19131	36437	36452	61860	61860					0.0545550114627531
SLLLGALKP	9	Unmodified	_SLLLGALKP_					0	0	0			REV__ENST00000358393.1_2_20:62669539-62670381:+|nuORF	REV__ENST00000358393.1_2_20:62669539-62670381:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3005065917969	2	456.299853	910.585153	-0.76777	-0.00035033	3.2946	0.0015033	2.5268	0.001153	456.30128506086476	48.129	1.2211	48.104	47.704	48.926	-0.025116					68	30	3	0	0	0	0.78983	1	4108	4108		27.882	3.6795	1	255900	+		54616	25434	36438	36453	61861	61861					0.12628422833643071
SLLLGALKP	9	Unmodified	_SLLLGALKP_					0	0	0			REV__ENST00000358393.1_2_20:62669539-62670381:+|nuORF	REV__ENST00000358393.1_2_20:62669539-62670381:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3009338378906	2	456.299853	910.585153	-1.2433	-0.00056734	3.7269	0.0017006	2.4835	0.0011332	456.3014230602223	46.4	1.7062	46.416	45.86	47.566	0.015514					104	48	3	0	0	0	0.7932	1	3382	3382		20.947	1.587	1	349560	+		54617	25434	36438	36453	61862	61862					0.12628422833643071
SLLLHLLED	9	Unmodified	_SLLLHLLED_					0	0	0		nc|ENSG00000091732|Q86WB0-3|ZC3HC1;nc|ENSG00000091732|Q86WB0-2|ZC3HC1;ENSG00000091732|ENST00000358303|ZC3HC1	nc|ENSG00000091732|Q86WB0-3|ZC3HC1	nc|ENSG00000091732|Q86WB0-3|ZC3HC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.8167114257812	2	526.802957	1051.59136	4.5173	0.0023797	1.2478	0.00065736	5.7651	0.0030371	527.3029832139193	106.55	0.52496	106.7	106.34	106.87	0.14929					31	26	2	0	0	0	0.20789	1	12996	12996		29.15	2.4566	1	102000			54618	1682	36439	36454	61863	61863					0.06762896274540253
SLLLKDQV	8	Unmodified	_SLLLKDQV_					0	0	0			REV__nc|ENSG00000169180|Q96QU8-2|XPO6	REV__nc|ENSG00000169180|Q96QU8-2|XPO6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.279296875	2	458.279118	914.543683	-0.56135	-0.00025726	-0.50937	-0.00023343	-1.0707	-0.00049069	458.2787173636088	47.978	1.1103	48.901	48.278	49.388	0.92315					53	27	3	0	0	0	0.91977	1	4631	4631		45.952	0	1	1383600	+		54619	21557	36440	36455	61864	61864					0.08299242074326685
SLLLLDEVQ	9	Unmodified	_SLLLLDEVQ_					0	0	0		ENST00000426044.1_1_19:12305955-12345626:+|nuORF	ENST00000426044.1_1_19:12305955-12345626:+|nuORF	ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.2950439453125	2	515.294965	1028.57538	0.039155	2.0176E-05	-0.13997	-7.2128E-05	-0.10082	-5.1952E-05	515.2947822520104	64.702	0.70649	64.667	64.299	65.005	-0.034798					30	17	2	0	0	0	0.11055	1	6177	6177		90.37	2.1929	1	425860			54620	11545	36441	36456	61865	61865					0.062231900375991245
SLLLPLVGA	9	Unmodified	_SLLLPLVGA_					0	0	0			REV__ENSG00000080200|ENST00000389622|CRYBG3	REV__ENSG00000080200|ENST00000389622|CRYBG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78863525390625	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	1	2304	2304		17.365	2.7009	1	11532000	+		54621	16797	36442	36457	61866	61866					0.11308733942337312
SLLLPRDRLL	10	Unmodified	_SLLLPRDRLL_					0	0	0			REV__nc|ENSG00000179583|P33076-2|CIITA	REV__nc|ENSG00000179583|P33076-2|CIITA	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3804321289062	2	598.379697	1194.74484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.976	1	43.949	43.449	44.449	-0.026764								0	0	0	0.45132	1	3384	3384		28.081	5.5018	1		+		54622	22342	36443	36458	61867	61867					0.15525931110846614
SLLLPTIVT	9	Unmodified	_SLLLPTIVT_					0	0	0		nc|ENSG00000112659|Q8IWT3-3|CUL9;ENSG00000112659|ENST00000252050|CUL9;ENST00000451399.5_1_6:43152048-43155921:+|nuORF;ENST00000515773.5_1_6:43152048-43164205:+|nuORF	nc|ENSG00000112659|Q8IWT3-3|CUL9	nc|ENSG00000112659|Q8IWT3-3|CUL9	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.80523681640625	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.464	1	42.419	41.919	42.919	-0.045467								0	0	0	0.31828	1	2853	2853		24.203	0	1				54623	2675	36444	36459	61868	61868					0.11580985768239316
SLLLSALPL	9	Unmodified	_SLLLSALPL_					0	0	0		ENSG00000174948|ENST00000389740|GPR149	ENSG00000174948|ENST00000389740|GPR149	ENSG00000174948|ENST00000389740|GPR149	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.7998962402344	2	463.799686	925.584819	-1.1872	-0.0005506	2.6442	0.0012264	1.4571	0.00067579	463.80074391702703	41.648	1.5471	41.608	41.079	42.626	-0.039845					90	38	3	0	0	0	0.7932	1	3185	3185		24.203	1.1603	1	510860			54624	6976	36445	36460	61869	61869					0.11905003113804469
SLLLSIKMRL	10	Unmodified	_SLLLSIKMRL_					0	0	0		ENSG00000171403|ENST00000246662|KRT9;CON__P35527	ENSG00000171403|ENST00000246662|KRT9	ENSG00000171403|ENST00000246662|KRT9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.3712158203125	2	587.373026	1172.7315	0.44494	0.00026135	-3.289	-0.0019319	-2.8441	-0.0016705	587.3709316988227	90.094	1.0743	90.545	90.308	91.382	0.45058					57	26	3	0	0	0	0.44803	1	10659	10659		60.118	1.8883	1	613160		+	54625	598	36446	36461	61870	61870					0.15204357007223734
SLLLSPLLT	9	Unmodified	_SLLLSPLLT_					0	0	0			REV__nc|ENSG00000118094|O43280-2|TREH	REV__nc|ENSG00000118094|O43280-2|TREH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.80584716796875	2	478.804968	955.595384	-1.2024	-0.0005757	4.0232	0.0019263	2.8208	0.0013506	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.7932	1	2891	2891		23.042	4.7181	1	361300	+		54626	18292	36447	36462	61871	61871					0.11580985768216578
SLLLSPVVK	9	Unmodified	_SLLLSPVVK_					0	0	0			REV__ENSG00000140093|ENST00000261994|SERPINA10	REV__ENSG00000140093|ENST00000261994|SERPINA10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.3143615722656	2	478.312961	954.611368	-1.7913	-0.00085682	4.48	0.0021429	2.6887	0.001286	478.3149127004832	37.231	1.0176	37.231	36.822	37.84	0					42	23	2	0	0	0	0.78983	1	2208	2208		27.882	1.1893	1	99124	+		54627	19596	36448	36463	61872	61872					0.13224692005132965
SLLLSPVVK	9	Unmodified	_SLLLSPVVK_					0	0	0			REV__ENSG00000140093|ENST00000261994|SERPINA10	REV__ENSG00000140093|ENST00000261994|SERPINA10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	478.312961	954.611368	-0.93335	-0.00044643	3.8975	0.0018642	2.9641	0.0014178	478.3145116445767	37.505	0.95667	37.522	37.022	37.979	0.016563	0.17319	-5.2854E-05	NaN	27.882	36	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63911	+		54628	19596	36448	36463							0.13224692005132965
SLLLSPVVK	9	Unmodified	_SLLLSPVVK_					0	0	0			REV__ENSG00000140093|ENST00000261994|SERPINA10	REV__ENSG00000140093|ENST00000261994|SERPINA10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	478.312961	954.611368	0.20895	9.9945E-05	2.3184	0.0011089	2.5274	0.0012089	478.3139325570155	37.189	0.8762	37.288	36.951	37.827	0.099277	-0.06046	-0.0015634	NaN	27.882	38	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67369	+		54629	19596	36448	36463							0.13224692005132965
SLLLSPVVK	9	Unmodified	_SLLLSPVVK_					0	0	0			REV__ENSG00000140093|ENST00000261994|SERPINA10	REV__ENSG00000140093|ENST00000261994|SERPINA10	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	478.312961	954.611368	0.96533	0.00046173	1.6524	0.00079038	2.6178	0.0012521	478.3135397071743	37.339	0.65961	37.652	37.165	37.825	0.31312	0.3034	-0.0022005	NaN	27.882	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85646	+		54630	19596	36448	36463							0.13224692005132965
SLLLSRTN	8	Unmodified	_SLLLSRTN_					0	0	0			REV__ENSG00000183856|ENST00000361170|IQGAP3	REV__ENSG00000183856|ENST00000361170|IQGAP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.2664794921875	2	452.266542	902.51853	1.5459	0.00069917	-1.7833	-0.00080653	-0.23739	-0.00010736	452.26560314564324	36.283	0.78641	36.723	36.493	37.279	0.44043					27	18	2	0	0	0	0.8537	1	2865	2865		25.574	3.6142	1	1965800	+		54631	22632	36449	36464	61873	61873					0.0633718727174255
SLLNEYTLY	9	Unmodified	_SLLNEYTLY_					0	0	0			REV__ENSG00000180182|ENST00000324817|MED14	REV__ENSG00000180182|ENST00000324817|MED14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.2859497070312	2	558.284597	1114.55464	0.44639	0.00024921	-0.41844	-0.00023361	0.027947	1.5602E-05	558.2840615555907	75.271	0.56576	75.318	75.022	75.588	0.04644					35	15	3	0	0	0	0.64922	1	7301	7301		44.117	0.49075	1	94987	+		54632	22379	36450	36465	61874	61874					0.0019459965797068435
SLLNYVLGTYT	11	Unmodified	_SLLNYVLGTYT_					0	0	0		ENSG00000175065|ENST00000308128|DSG4;nc|ENSG00000175065|Q86SJ6-2|DSG4	ENSG00000175065|ENST00000308128|DSG4	ENSG00000175065|ENST00000308128|DSG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3366088867188	2	622.332079	1242.6496	2.9643	0.0018448	3.9682	0.0024696	6.9326	0.0043144	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.7144	1	12294	12294		29.17	21.977	1	435720			54633	6986	36451	36466	61875	61875					0.0379853312913383
SLLPLFLFV	9	Unmodified	_SLLPLFLFV_					0	0	0			REV__ENST00000535229.1_1_6:166195147-166399619:-|nuORF	REV__ENST00000535229.1_1_6:166195147-166399619:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8275146484375	2	524.825704	1047.63685	0.8139	0.00042716	1.4579	0.00076513	2.2718	0.0011923	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.7932	1	10633	10633		19.36	0	1	27719000	+		54634	28381	36452	36467	61876	61876					0.1149416652756372
SLLPQDMMS	9	Unmodified	_SLLPQDMMS_					0	0	0		nc|ENSG00000087111|Q96S52-2|PIGS;ENSG00000087111|ENST00000308360|PIGS	nc|ENSG00000087111|Q96S52-2|PIGS	nc|ENSG00000087111|Q96S52-2|PIGS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.2394104003906	2	511.238278	1020.462	-0.27141	-0.00013875	1.1325	0.00057897	0.86107	0.00044021	511.2388240612899	51.263	0.63394	51.178	50.837	51.471	-0.084538					21	16	2	0	0	0	0.78983	1	4107	4107		27.882	0	1	72852			54635	1568	36453	36468	61877	61877					-0.047409446714254955
SLLQFSTQML	10	Unmodified	_SLLQFSTQML_					0	0	0			REV__ENSG00000144747|ENST00000398559|TMF1	REV__ENSG00000144747|ENST00000398559|TMF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.305419921875	2	584.307549	1166.60055	-0.544	-0.00031786	-0.17734	-0.00010362	-0.72135	-0.00042149	584.3073834110404	50.679	0.90636	51.127	50.515	51.421	0.44761					54	21	3	0	0	0	0.31985	3	4958	4958;4970;5006		70.816	14.851	1	629960	+		54636	19910	36454	36469	61878;61879;61880	61878					0.023909215685534946
SLLQFSTQML	10	Unmodified	_SLLQFSTQML_					0	0	0			REV__ENSG00000144747|ENST00000398559|TMF1	REV__ENSG00000144747|ENST00000398559|TMF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.306884765625	2	584.307549	1166.60055	0.57115	0.00033373	-0.84844	-0.00049575	-0.27728	-0.00016202	584.306949174939	50.241	0.9005	51.086	50.724	51.625	0.84501					38	21	2	0	0	0	0.18173	2	4961	4948;4961		90.37	22.876	1	881490	+		54637	19910	36454	36469	61881;61882	61882					0.023909215685534946
SLLQFSTQML	10	Unmodified	_SLLQFSTQML_					0	0	0			REV__ENSG00000144747|ENST00000398559|TMF1	REV__ENSG00000144747|ENST00000398559|TMF1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	584.307549	1166.60055	-0.544	-0.00031786	-0.17734	-0.00010362	-0.72135	-0.00042149	584.3073834110404	50.679	0.90636	51.127	50.515	51.421	0.44761	0.020442	0.00057189	NaN	90.37	54	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	629960	+		54638	19910	36454	36469							0.023909215685534946
SLLQFSTQML	10	Unmodified	_SLLQFSTQML_					0	0	0			REV__ENSG00000144747|ENST00000398559|TMF1	REV__ENSG00000144747|ENST00000398559|TMF1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	584.307549	1166.60055	0.57115	0.00033373	-0.84844	-0.00049575	-0.27728	-0.00016202	584.306949174939	50.241	0.9005	51.086	50.724	51.625	0.84501	-0.020442	-0.00021236	NaN	90.37	38	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	881490	+		54639	19910	36454	36469							0.023909215685534946
SLLQRSEEIF	10	Unmodified	_SLLQRSEEIF_					0	0	0			REV__ENSG00000179134|ENST00000610417|SAMD4B	REV__ENSG00000179134|ENST00000610417|SAMD4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3316650390625	2	611.327328	1220.6401	-0.40721	-0.00024894	3.6987	0.0022611	3.2915	0.0020122	611.3294350755532	78.668	0.95905	78.724	78.415	79.375	0.056122					53	26	3	0	0	0	0.54701	1	7635	7635		52.937	6.4799	1	307880	+		54640	22317	36455	36470	61883	61883					0.038607648436027375
SLLRKVKPLP	10	Unmodified	_SLLRKVKPLP_					0	0	0			REV__ENSG00000138246|ENST00000260818|DNAJC13	REV__ENSG00000138246|ENST00000260818|DNAJC13	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8428344726562	2	575.887158	1149.75976	1.9394	0.0011169	1.3622	0.00078447	3.3016	0.0019013	576.3908846925765	92.825	0.12807	92.761	92.674	92.802	-0.06414					4	2	2	0	0	0	0.37624	1	9820	9820		13.454	0	1	14870	+		54641	19452	36456	36471	61884	61884					0.19087422978850555
SLLRLPWCLRP	11	Unmodified	_SLLRLPWCLRP_					0	0	0		ENST00000245407.7_1_5:131726498-131729479:+|nuORF	ENST00000245407.7_1_5:131726498-131729479:+|nuORF	ENST00000245407.7_1_5:131726498-131729479:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.932861328125	3	451.932309	1352.7751	0.75363	0.00034059	0.067854	3.0665E-05	0.82148	0.00037125	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.77205	1	10611	10611		17.167	0	1	952120			54642	9267	36457	36472	61885	61885					0.11281966504361662
SLLRRWHLRWL	11	Unmodified	_SLLRRWHLRWL_					0	0	0			REV__nc|ENSG00000204580|Q08345-2|DDR1	REV__nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.9755249023438	3	512.640516	1534.89972	0.50747	0.00026015	1.189	0.00060951	1.6964	0.00086966	512.6411189020092	19.41	0.49561	18.78	18.533	19.028	-0.62961					28	10	4	0	0	0	0.79224	1	518	518		12.957	3.3113	1	293980	+		54643	23505	36458	36473	61886	61886					0.15366600035918054
SLLRRWHLRWL	11	Unmodified	_SLLRRWHLRWL_					0	0	0			REV__nc|ENSG00000204580|Q08345-2|DDR1	REV__nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	512.640516	1534.89972	0.88663	0.00045452	0.60994	0.00031268	1.4966	0.0007672	512.6408472601623	19.217	0.5245	18.748	18.495	19.019	-0.46967	-0.016204	-0.00066628	NaN	12.957	33	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	175630	+		54644	23505	36458	36473							0.15366600035918054
SLLRRWHLRWL	11	Unmodified	_SLLRRWHLRWL_					0	0	0			REV__nc|ENSG00000204580|Q08345-2|DDR1	REV__nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	512.640516	1534.89972	0.50747	0.00026015	1.189	0.00060951	1.6964	0.00086966	512.6411189020092	19.41	0.49561	18.78	18.533	19.028	-0.62961	0.016204	0.00022419	NaN	12.957	28	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	293980	+		54645	23505	36458	36473							0.15366600035918054
SLLSAARR	8	Unmodified	_SLLSAARR_					0	0	0			REV__nc|ENSG00000102893|Q93100-4|PHKB	REV__nc|ENSG00000102893|Q93100-4|PHKB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26507568359375	2	437.266876	872.519199	-0.36504	-0.00015962	-2.3712	-0.0010368	-2.7362	-0.0011965	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.84341	1	1037	1037		24.203	4.8428	1	1300600	+		54646	29749	36459	36474	61887	61887					0.0778402671146523
SLLSAARR	8	Unmodified	_SLLSAARR_					0	0	0			REV__nc|ENSG00000102893|Q93100-4|PHKB	REV__nc|ENSG00000102893|Q93100-4|PHKB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.264892578125	2	437.266876	872.519199	0.051124	2.2355E-05	-3.1793	-0.0013902	-3.1282	-0.0013678	437.26563820123806	25.538	2.1653	25.281	24.501	26.666	-0.25721					170	48	6	0	0	0	0.79929	1	1259	1259		18.324	0	1	21512000	+		54647	29749	36459	36474	61888	61888					0.0778402671146523
SLLSLVTGLK	10	Unmodified	_SLLSLVTGLK_					0	0	0		ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8287963867188	2	515.828975	1029.6434	-0.053798	-2.7751E-05	-0.78802	-0.00040648	-0.84182	-0.00043423	515.8286256952769	82.963	2.9815	83.394	82.512	85.494	0.43108					225	72	6	0	0	0	8.189700000000001E-56	15	9625	9568;9577;9589;9601;9613;9625;9637;9649;9661;9673;9685;9698;9712;9724;9749		204.62	50.376	1	60314000			54648	12055	36460	36475	61889;61890;61891;61892;61893;61894;61895;61896;61897;61898;61899;61900;61901;61902;61903	61894					0.1297605968827611
SLLSLVTGLK	10	Unmodified	_SLLSLVTGLK_					0	0	0		ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8290405273438	2	515.828975	1029.6434	0.19531	0.00010074	-1.0628	-0.0005482	-0.86746	-0.00044746	515.8284700938677	82.923	3.9138	83.397	82.961	86.875	0.47383					240	95	6	0	0	0	5.7367E-86	15	9610	9601;9610;9622;9634;9646;9658;9670;9682;9694;9707;9719;9731;9743;9755;9768		223.88	59.469	1	58931000			54649	12055	36460	36475	61904;61905;61906;61907;61908;61909;61910;61911;61912;61913;61914;61915;61916;61917;61918	61905					0.1297605968827611
SLLSLVTGLK	10	Unmodified	_SLLSLVTGLK_					0	0	0		ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	515.828975	1029.6434	-0.91757	-0.00047331	0.38638	0.0001993	-0.53119	-0.000274	515.8290738491122	83.69	0.45388	83.69	83.509	83.963	0	0.1536	0.0013079	NaN	223.88	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65825			54650	12055	36460	36475							0.1297605968827611
SLLSLVTGLK	10	Unmodified	_SLLSLVTGLK_					0	0	0		ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	515.828975	1029.6434	0.97231	0.00050155	-1.7262	-0.00089041	-0.75385	-0.00038886	515.8278229496034	83.721	0.48236	83.652	83.411	83.894	-0.069313	0.11562	-0.00087148	NaN	223.88	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33669			54651	12055	36460	36475							0.1297605968827611
SLLSLVTGLK	10	Unmodified	_SLLSLVTGLK_					0	0	0		ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	ENST00000462917.1_1_17:39847120-39847177:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	515.828975	1029.6434	0.43502	0.0002244	0.0069838	3.6025E-06	0.44201	0.000228	515.8283723157881	83.489	0.35088	83.549	83.41	83.761	0.059258	0.012259	0.00091654	NaN	223.88	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23758			54652	12055	36460	36475							0.1297605968827611
SLLSPLLSV	9	Unmodified	_SLLSPLLSV_					0	0	0		ENST00000536250.1_1_11:61204372-61205638:+|nuORF;ENSG00000256591|ENST00000541135|unknown;ENSG00000167985|ENST00000301761|SDHAF2	ENST00000536250.1_1_11:61204372-61205638:+|nuORF	ENST00000536250.1_1_11:61204372-61205638:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7909240722656	2	464.789318	927.564084	0.1718	7.9849E-05	2.8678	0.0013329	3.0395	0.0014127	464.7905115336865	34.402	1.3055	34.346	33.931	35.236	-0.055149					140	57	3	0	0	0	0.78058	1	1728	1728		30.504	0	1	289420			54653	6349	36461	36476	61919	61919					0.0974041273415196
SLLSPLLSV	9	Unmodified	_SLLSPLLSV_					0	0	0		ENST00000536250.1_1_11:61204372-61205638:+|nuORF;ENSG00000256591|ENST00000541135|unknown;ENSG00000167985|ENST00000301761|SDHAF2	ENST00000536250.1_1_11:61204372-61205638:+|nuORF	ENST00000536250.1_1_11:61204372-61205638:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.79034423828125	2	464.789318	927.564084	0.090365	4.2E-05	2.7326	0.0012701	2.823	0.0013121	464.7905453409174	36.857	1.3586	36.797	35.976	37.335	-0.060333					62	38	2	0	0	0	0.7932	1	2070	2070		21.96	3.6355	1	232790			54654	6349	36461	36476	61920	61920					0.0974041273415196
SLLTNTYVTKR	11	Unmodified	_SLLTNTYVTKR_					0	0	0			REV__nc|ENSG00000273345|Q8IVW4-2|CDKL3	REV__nc|ENSG00000273345|Q8IVW4-2|CDKL3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3927612304688	2	648.369527	1294.7245	2.6465	0.0017159	1.0253	0.00066479	3.6719	0.0023807	648.3696817488193	107.32	0.3327	107.28	106.97	107.3	-0.034134					10	7	2	0	0	0	0.17339	1	11864	11864		31.634	4.587	1	320980	+		54655	16114	36462	36477	61921	61921					0.088927156603404
SLLTQPIFL	9	Unmodified	_SLLTQPIFL_					0	0	0		ENSG00000213901|ENST00000409878|SLC23A3;nc|ENSG00000213901|Q6PIS1-5|SLC23A3;nc|ENSG00000213901|Q6PIS1-2|SLC23A3	ENSG00000213901|ENST00000409878|SLC23A3	ENSG00000213901|ENST00000409878|SLC23A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3148193359375	2	516.310418	1030.60628	3.1012	0.0016012	3.8274	0.0019761	6.9286	0.0035773	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.7932	1	13160	13160		17.365	0.89182	1	1162600			54656	8605	36463	36478	61922	61922					0.09220388142512093
SLLTSELRSK	10	Unmodified	_SLLTSELRSK_					0	0	0		nc|ENSG00000226266|Q9UIF8-4|BAZ2B;nc|ENSG00000226266|Q9UIF8-2|BAZ2B;nc|ENSG00000226266|Q9UIF8-5|BAZ2B;nc|ENSG00000226266|Q9UIF8-3|BAZ2B;ENSG00000123636|ENST00000392783|BAZ2B;ENST00000467184.5_1_2:160294777-160295206:-|nuORF	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3298950195312	2	567.32987	1132.64519	1.492	0.00084643	-1.3496	-0.00076566	0.14237	8.0771E-05	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.86471	1	9371	9371		30.318	2.2362	1	5346500			54657	3286	36464	36479	61923	61923					0.08417068706239661
SLLTSELRSK	10	Unmodified	_SLLTSELRSK_					0	0	0		nc|ENSG00000226266|Q9UIF8-4|BAZ2B;nc|ENSG00000226266|Q9UIF8-2|BAZ2B;nc|ENSG00000226266|Q9UIF8-5|BAZ2B;nc|ENSG00000226266|Q9UIF8-3|BAZ2B;ENSG00000123636|ENST00000392783|BAZ2B;ENST00000467184.5_1_2:160294777-160295206:-|nuORF	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3289184570312	2	567.32987	1132.64519	-1.3957	-0.00079181	1.2535	0.00071113	-0.14221	-8.0679E-05	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86471	1	9809	9809		30.318	2.4355	1	17338000			54658	3286	36464	36479	61924	61924					0.08417068706239661
SLLTVTSTSRL	11	Unmodified	_SLLTVTSTSRL_					0	0	0			REV__nc|ENSG00000263155|P0CAP1-8|MYZAP	REV__nc|ENSG00000263155|P0CAP1-8|MYZAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3428344726562	2	589.342978	1176.6714	-0.36759	-0.00021664	0.33052	0.00019479	-0.037071	-2.1847E-05	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.74763	1	9678	9678		22.58	0.89391	1	11103000	+		54659	23952	36465	36480	61925	61925					0.09013337877695449
SLLVSVLTP	9	Unmodified	_SLLVSVLTP_					0	0	0		ENSG00000179468|ENST00000350513|OR9A2	ENSG00000179468|ENST00000350513|OR9A2	ENSG00000179468|ENST00000350513|OR9A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7902526855469	2	464.789318	927.564084	0.19154	8.9025E-05	2.6971	0.0012536	2.8886	0.0013426	464.7904622046614	36.811	0.86831	36.91	36.514	37.382	0.099277					56	23	3	0	0	0	0.78536	1	2020	2020		29.15	3.6994	1	232950			54660	7272	36466	36481	61926	61926					0.09740412734140591
SLLYFSVVIIR	11	Unmodified	_SLLYFSVVIIR_					0	0	0		nc|ENSG00000197217|Q9Y227-2|ENTPD4;ENST00000523958.5_1_8:23291828-23307413:-|nuORF;ENSG00000197217|ENST00000358689|ENTPD4	nc|ENSG00000197217|Q9Y227-2|ENTPD4	nc|ENSG00000197217|Q9Y227-2|ENTPD4	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2675476074219	3	437.267463	1308.78056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.109	1	20.109	19.609	20.609	0								0	0	0	0.56276	1	465	465		22.562	2.5311	1				54661	15190	36467	36482	61927	61927					0.1385196856786024
SLMFIRPKK	9	Unmodified	_SLMFIRPKK_					0	0	0		nc|ENSG00000077684|Q6IE81-3|JADE1;ENSG00000077684|ENST00000226319|JADE1	nc|ENSG00000077684|Q6IE81-3|JADE1	nc|ENSG00000077684|Q6IE81-3|JADE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.2803344726562	2	560.338987	1118.66342	1.1763	0.00065913	0.98898	0.00055416	2.1653	0.0012133	560.3394832385593	88.715	1.3063	89.164	87.934	89.241	0.44892					59	31	2	0	0	0	0.20789	1	10325	10325		42.396	15.6	1	297790			54662	1385	36468	36483	61928	61928					0.10883532147249753
SLMHSFILK	9	Unmodified	_SLMHSFILK_					0	0	0		ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	ENSG00000125971|ENST00000357156|DYNLRB1	ENSG00000125971|ENST00000357156|DYNLRB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3023071289062	2	538.30207	1074.58959	-0.44362	-0.0002388	1.0241	0.00055128	0.58048	0.00031247	538.3023671085856	52.093	0.86408	52.516	52.106	52.97	0.42348					44	20	3	0	0	0	0.0080651	5	5189	5177;5189;5201;5213;5227		134.81	47.114	1	3602500			54663	3434	36469	36484	61929;61930;61931;61932;61933	61930					0.055275639849242
SLMHSFILK	9	Unmodified	_SLMHSFILK_					0	0	0		ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF	ENSG00000125971|ENST00000357156|DYNLRB1	ENSG00000125971|ENST00000357156|DYNLRB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3034057617188	2	538.30207	1074.58959	-0.058603	-3.1546E-05	0.49506	0.00026649	0.43646	0.00023495	538.302151358886	51.836	0.65184	52.504	52.147	52.799	0.66729					37	15	3	0	0	0	0.038282	4	5211	5173;5185;5197;5211		113.41	25.715	1	4738600			54664	3434	36469	36484	61934;61935;61936;61937	61937					0.055275639849242
SLMPWFHGK	9	Unmodified	_SLMPWFHGK_					0	0	0		nc|ENSG00000007264|P42679-3|MATK;ENSG00000007264|ENST00000310132|MATK;nc|ENSG00000007264|P42679-2|MATK;ENST00000568329.5_1_15:75091021-75093212:+|nuORF;ENSG00000103653|ENST00000220003|CSK	nc|ENSG00000007264|P42679-3|MATK;ENSG00000103653|ENST00000220003|CSK	nc|ENSG00000007264|P42679-3|MATK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.7783203125	2	551.778762	1101.54297	-0.11966	-6.6026E-05	0.4246	0.00023428	0.30494	0.00016826	551.7787044154119	54.774	0.71234	55.181	54.907	55.619	0.40663					34	16	3	0	0	0	0.38563	1	5594	5594		58.782	19.529	1	978470			54665	723;2095	36470	36485	61938	61938					-0.0037387584636690008
SLMTMCQDS	9	Carbamidomethyl (C),Oxidation (M)	_SLMTM(Oxidation (M))C(Carbamidomethyl (C))QDS_	SLMTMC(1)QDS	SLM(0.093)TM(0.907)CQDS	SLMTMC(41)QDS	SLM(-9.9)TM(9.9)CQDS	0	1	1		ENSG00000107968|ENST00000263056|MAP3K8;nc|ENSG00000107968|P41279-2|MAP3K8	ENSG00000107968|ENST00000263056|MAP3K8	ENSG00000107968|ENST00000263056|MAP3K8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.7054443359375	2	544.706485	1087.39842	0.42334	0.0002306	-3.2676	-0.0017799	-2.8443	-0.0015493	544.7046242848601	31.683	0.70208	31.677	31.385	32.087	-0.0061455					38	15	3	0	0	0	0.68711	1	1752	1752		41.427	7.2541	2	114750			54666	2385	36471	36486	61939	61939	29	46			-0.1417867317084074
SLNISRHT	8	Unmodified	_SLNISRHT_					0	0	0		ENST00000478296.5_1_3:75787041-75787971:-|nuORF	ENST00000478296.5_1_3:75787041-75787971:-|nuORF	ENST00000478296.5_1_3:75787041-75787971:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2546691894531	2	464.253966	926.493378	-1.597	-0.00074142	1.7218	0.00079935	0.12478	5.7928E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.884	1	8309	8309		33.516	0	1	1324500			54667	12385	36472	36487	61940	61940					0.027191324691784757
SLNKKRASA	9	Unmodified	_SLNKKRASA_					0	0	0			REV__nc|ENSG00000185513|Q9Y468-3|L3MBTL1	REV__nc|ENSG00000185513|Q9Y468-3|L3MBTL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7904357910156	2	487.790715	973.566878	0.54992	0.00026825	-0.9209	-0.00044921	-0.37098	-0.00018096	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.7932	1	8333	8333		24.519	0.31644	1	633420	+		54668	22770	36473	36488	61941	61941					0.0790368091164737
SLNPALHKRK	10	Unmodified	_SLNPALHKRK_					0	0	0			REV__ENST00000402966.1_1_22:42093436-42094048:+|nuORF	REV__ENST00000402966.1_1_22:42093436-42094048:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3538208007812	2	582.354014	1162.69348	0.16989	9.8934E-05	-0.87197	-0.0005078	-0.70208	-0.00040886	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.85251	1	12578	12578		19.997	0.89325	1	635410	+		54669	26270	36474	36489	61942	61942					0.1186360713677459
SLNPLIKYL	9	Unmodified	_SLNPLIKYL_					0	0	0		nc|ENSG00000132196|P56937-3|HSD17B7;nc|ENSG00000132196|P56937-2|HSD17B7;ENSG00000132196|ENST00000254521|HSD17B7	nc|ENSG00000132196|P56937-3|HSD17B7	nc|ENSG00000132196|P56937-3|HSD17B7	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.820068359375	2	530.823692	1059.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.401	1	84.551	84.051	85.051	0.14952								0	0	0	0.28772	1	8167	8167		35.618	3.6634	1				54670	3772	36475	36490	61943	61943					0.10540077033851958
SLNQKEVVQ	9	Unmodified	_SLNQKEVVQ_					0	0	0			REV__ENSG00000092621|ENST00000641023|PHGDH	REV__ENSG00000092621|ENST00000641023|PHGDH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.78515625	2	522.787838	1043.56112	-0.63317	-0.00033102	-0.86227	-0.00045078	-1.4954	-0.0007818	522.7862723097608	45.253	1.2158	46.149	45.351	46.567	0.89542					56	29	3	0	0	0	0.44421	1	4193	4193		54.776	6.8168	1	2076300	+		54671	17036	36476	36491	61944	61944					0.04108537609317864
SLNQPAPL	8	Unmodified	_SLNQPAPL_					0	0	0			REV__ENST00000469964.5_1_3:136699276-136714306:+|nuORF	REV__ENST00000469964.5_1_3:136699276-136714306:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.235107421875	2	420.23471	838.454868	0.036063	1.5155E-05	0.14225	5.9776E-05	0.17831	7.4931E-05	420.2345705341308	38.815	0.57835	38.787	38.496	39.074	-0.027843					22	12	2	0	0	0	0.60155	1	2663	2663		71.378	0	1	126260	+		54672	22003	36477	36492	61945	61945					0.029178268346640834
SLNRKGKY	8	Unmodified	_SLNRKGKY_					0	0	0			REV__nc|ENSG00000135218|P16671-2|CD36	REV__nc|ENSG00000135218|P16671-2|CD36	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.2774963378906	2	483.279983	964.545414	-0.91485	-0.00044213	-1.131	-0.00054658	-2.0458	-0.00098871	483.27955288343264	95.596	2.0172	95.596	94.881	96.898	0					89	46	3	0	0	0	0.8621	1	9586	9586		26.693	2.4902	1	657390	+		54673	19200	36478	36493	61946	61946					0.06172295882936396
SLNRPNRL	8	Unmodified	_SLNRPNRL_					0	0	0		ENST00000464428.2_1_1:177898995-177929556:-|nuORF;ENST00000466953.6_1_1:177898995-177928232:-|nuORF;ENSG00000120341|ENST00000308284|SEC16B	ENST00000464428.2_1_1:177898995-177929556:-|nuORF	ENST00000464428.2_1_1:177898995-177929556:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2829895019531	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.669	1	44.119	43.619	44.619	0.45025								0	0	0	0.30045	1	3963	3963		40.573	3.4135	1				54674	3127	36479	36494	61947	61947					0.06602814114467037
SLNRVLRVI	9	Unmodified	_SLNRVLRVI_					0	0	0			REV__ENSG00000077235|ENST00000356183|GTF3C1	REV__ENSG00000077235|ENST00000356183|GTF3C1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2922973632812	2	535.345658	1068.67676	-0.2425	-0.00012982	2.5268	0.0013527	2.2843	0.0012229	535.3468449394754	81.907	1.0843	82.407	82.072	83.156	0.49967					53	26	3	0	0	0	0.20789	1	9595	9595		29.15	9.1528	1	939720	+		54675	16739	36480	36495	61948	61948					0.14517106250832512
SLNVATVTVF	10	Unmodified	_SLNVATVTVF_					0	0	0			REV__ENSG00000026559|ENST00000371571|KCNG1	REV__ENSG00000026559|ENST00000371571|KCNG1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3164672851562	2	525.795132	1049.57571	0.5133	0.00026989	-0.5414	-0.00028467	-0.028103	-1.4777E-05	525.7947207960365	59.029	0.72563	58.998	58.675	59.401	-0.030884					41	21	3	0	0	0	0.37624	1	5538	5538		77.318	3.0625	1	194150	+		54676	16260	36481	36496	61949	61949					0.052906097574805244
SLNVSRRV	8	Unmodified	_SLNVSRRV_					0	0	0			REV__nc|ENSG00000133816|O94851|MICAL2	REV__nc|ENSG00000133816|O94851|MICAL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77764892578125	2	465.777608	929.540663	0.52254	0.00024339	-0.63525	-0.00029589	-0.11271	-5.2499E-05	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.86288	1	8422	8422		26.796	0.10319	1	1330400	+		54677	29854	36482	36497	61950	61950					0.07307411740180214
SLPAFLLNPDK	11	Unmodified	_SLPAFLLNPDK_					0	0	0		ENST00000555923.1_1_14:81955203-81955461:-|nuORF	ENST00000555923.1_1_14:81955203-81955461:-|nuORF	ENST00000555923.1_1_14:81955203-81955461:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5641784667969	3	405.564168	1213.67067	-1.5366	-0.00062318	3.2052	0.0012999	1.6686	0.00067672	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.72106	1	5616	5616		25.068	0	1	187890			54678	13740	36483	36498	61951	61951					0.0723854322866373
SLPASLLLL	9	Unmodified	_SLPASLLLL_					0	0	0		ENST00000482636.1_1_6:26384034-26385742:+|nuORF;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;nc|ENSG00000124508|Q8WVV5-2|BTN2A2;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2	ENST00000482636.1_1_6:26384034-26385742:+|nuORF	ENST00000482636.1_1_6:26384034-26385742:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.80120849609375	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.78058	1	2939	2939		30.504	0	1	1091400			54679	3338	36484	36499	61952	61952					0.11905003113827206
SLPILLLN	8	Unmodified	_SLPILLLN_					0	0	0		ENST00000416426.6_2_17:55757114-55757225:+|nuORF	ENST00000416426.6_2_17:55757114-55757225:+|nuORF	ENST00000416426.6_2_17:55757114-55757225:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7879333496094	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.8347	1	3547	3547		23.042	2.5607	1	325400			54680	11395	36485	36500	61953	61953					0.11308733942337312
SLPIVAGLL	9	Unmodified	_SLPIVAGLL_					0	0	0		ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	ENSG00000172940|ENST00000311856|SLC22A13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7881774902344	2	441.786579	881.558604	-1.4973	-0.00066148	4.3629	0.0019275	2.8656	0.001266	441.788391738542	44.7	2.6432	44.712	43.395	46.038	0.012058					134	65	3	0	0	0	0.78058	1	3253	3253		30.504	0.6621	1	555340			54681	6807	36486	36501	61954	61954					0.11308733942325944
SLPKALLDPRR	11	Unmodified	_SLPKALLDPRR_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.8882446289062	2	633.388054	1264.76155	-0.79334	-0.00050249	-3.6185	-0.0022919	-4.4118	-0.0027944	633.3858115557084	49.904	1.4514	49.904	49.018	50.469	0					50	33	2	0	0	0	0.70278	1	3927	3927		28.081	10.613	1	147250			54682	3498	36487	36502	61955	61955					0.13976431996775318
SLPKKKKNL	9	Unmodified	_SLPKKKKNL_					0	0	0		ENST00000398148.7_3_19:6413682-6414126:-|nuORF	ENST00000398148.7_3_19:6413682-6414126:-|nuORF	ENST00000398148.7_3_19:6413682-6414126:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.3036499023438	2	528.350409	1054.68626	0.27252	0.00014399	-0.77152	-0.00040764	-0.499	-0.00026365	528.3500808899493	19.694	0.32203	19.064	18.892	19.214	-0.6296					13	6	3	0	0	0	0.20789	1	549	549		21.96	0	1	50648			54683	11179	36488	36503	61956	61956					0.16110874536366282
SLPKKTEKGLF	11	Unmodified	_SLPKKTEKGLF_					0	0	0		nc|ENSG00000170959|M0R2J8|DCDC1;chr11:30915711-30916870|14|14.5|0.66|4.46|-|ENST00000597505|DCDC1,DCDC1;chr11:30911420-30915511|13|14.38|0.7|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30909116-30911327|13|15.38|0.76|4.34|-|ENST00000597505|DCDC1,DCDC1;chr11:30905164-30906540|21|14.05|0.72|4.28|-|ENST00000597505|DCDC1,DCDC1;chr11:30903683-30904961|18|18.22|0.57|5.0|-|ENST00000597505|DCDC1,DCDC1;chr11:30899642-30900346|23|15.83|0.82|4.27|-|ENST00000597505|DCDC1,DCDC1;chr11:30894384-30899541|18|19.5|0.94|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30892997-30894248|22|18.0|0.9|4.32|-|ENST00000597505|DCDC1,DCDC1;ENSG00000170959|ENST00000684477|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.3681030273438	2	624.371538	1246.72852	-0.064107	-4.0027E-05	-0.026876	-1.6781E-05	-0.090983	-5.6807E-05	624.3714215480416	103.12	0.64318	103.12	102.83	103.47	0					30	15	2	0	0	0	0.17551	1	10545	10545		54.776	15.523	1	8491200			54684	100	36489	36504	61957	61957					0.1150280515405484
SLPKKTEKGLF	11	Unmodified	_SLPKKTEKGLF_					0	0	0		nc|ENSG00000170959|M0R2J8|DCDC1;chr11:30915711-30916870|14|14.5|0.66|4.46|-|ENST00000597505|DCDC1,DCDC1;chr11:30911420-30915511|13|14.38|0.7|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30909116-30911327|13|15.38|0.76|4.34|-|ENST00000597505|DCDC1,DCDC1;chr11:30905164-30906540|21|14.05|0.72|4.28|-|ENST00000597505|DCDC1,DCDC1;chr11:30903683-30904961|18|18.22|0.57|5.0|-|ENST00000597505|DCDC1,DCDC1;chr11:30899642-30900346|23|15.83|0.82|4.27|-|ENST00000597505|DCDC1,DCDC1;chr11:30894384-30899541|18|19.5|0.94|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30892997-30894248|22|18.0|0.9|4.32|-|ENST00000597505|DCDC1,DCDC1;ENSG00000170959|ENST00000684477|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	625.3677978515625	2	624.371538	1246.72852	0.92397	0.0005769	-0.98692	-0.00061621	-0.062952	-3.9306E-05	624.8724310614684	102.99	0.63356	103.11	102.81	103.44	0.12622					27	15	2	0	0	0	0.17387	1	10890	10890		45.972	9.5255	1	3944900			54685	100	36489	36504	61958	61958					0.1150280515405484
SLPKKTEKGLF	11	Unmodified	_SLPKKTEKGLF_					0	0	0		nc|ENSG00000170959|M0R2J8|DCDC1;chr11:30915711-30916870|14|14.5|0.66|4.46|-|ENST00000597505|DCDC1,DCDC1;chr11:30911420-30915511|13|14.38|0.7|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30909116-30911327|13|15.38|0.76|4.34|-|ENST00000597505|DCDC1,DCDC1;chr11:30905164-30906540|21|14.05|0.72|4.28|-|ENST00000597505|DCDC1,DCDC1;chr11:30903683-30904961|18|18.22|0.57|5.0|-|ENST00000597505|DCDC1,DCDC1;chr11:30899642-30900346|23|15.83|0.82|4.27|-|ENST00000597505|DCDC1,DCDC1;chr11:30894384-30899541|18|19.5|0.94|4.37|-|ENST00000597505|DCDC1,DCDC1;chr11:30892997-30894248|22|18.0|0.9|4.32|-|ENST00000597505|DCDC1,DCDC1;ENSG00000170959|ENST00000684477|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	625.3681640625	2	624.371538	1246.72852	1.9892	0.001242	-2.6417	-0.0016494	-0.65255	-0.00040743	624.3698470611107	102.71	0.68327	102.94	102.74	103.42	0.22556					44	22	2	0	0	0	0.17502	1	12530	12530		29.17	0	1	7398500			54686	100	36489	36504	61959	61959					0.1150280515405484
SLPLELTIP	9	Unmodified	_SLPLELTIP_					0	0	0		ENST00000601438.2_1_19:47725061-47725277:-|nuORF	ENST00000601438.2_1_19:47725061-47725277:-|nuORF	ENST00000601438.2_1_19:47725061-47725277:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7959899902344	2	491.794601	981.574648	-0.25318	-0.00012451	2.5897	0.0012736	2.3365	0.0011491	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.78536	1	3841	3841		29.15	3.6994	1	1502200			54687	14390	36490	36505	61960	61960					0.08312395388554705
SLPLITMLTD	10	Unmodified	_SLPLITMLTD_					0	0	0		ENSG00000112379|ENST00000251691|ARFGEF3	ENSG00000112379|ENST00000251691|ARFGEF3	ENSG00000112379|ENST00000251691|ARFGEF3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.8336791992188	2	552.304475	1102.5944	0.69858	0.00038583	3.1801	0.0017564	3.8786	0.0021422	552.306191088542	83.667	0.61013	83.814	83.395	84.005	0.14694					22	13	2	0	0	0	0.37624	1	8101	8101		14.865	0	1	72149			54688	2661	36491	36506	61961	61961					0.04720403337000789
SLPLRLQPRSV	11	Unmodified	_SLPLRLQPRSV_					0	0	0		ENST00000497483.1_1_22:50689302-50689819:-|nuORF	ENST00000497483.1_1_22:50689302-50689819:-|nuORF	ENST00000497483.1_1_22:50689302-50689819:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.384521484375	2	633.388054	1264.76155	0.12605	7.984E-05	-4.2714	-0.0027054	-4.1453	-0.0026256	633.3850253113031	51.101	1.496	51.017	50.491	51.987	-0.084538					79	43	3	0	0	0	0.71207	1	4074	4074		9.1829	0	1	224090			54689	12807	36492	36507	61962	61962					0.13976431996775318
SLPNLVLCV	9	Unmodified	_SLPNLVLCV_					0	0	0		ENST00000515035.5_1_5:149754748-149755505:+|nuORF	ENST00000515035.5_1_5:149754748-149755505:+|nuORF	ENST00000515035.5_1_5:149754748-149755505:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27825927734375	2	479.275521	956.536489	0.53004	0.00025403	3.2196	0.0015431	3.7496	0.0017971	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.78536	1	8175	8175		29.15	0.89528	1	2070000			54690	13073	36493	36508	61963	61963					0.05648186202256511
SLPPVAASR	9	Unmodified	_SLPPVAASR_					0	0	0		ENST00000420702.5_2_6:136571227-136571401:-|nuORF	ENST00000420702.5_2_6:136571227-136571401:-|nuORF	ENST00000420702.5_2_6:136571227-136571401:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2607727050781	2	449.261259	896.507966	0.49762	0.00022356	-1.9183	-0.00086184	-1.4207	-0.00063828	449.260034439117	72.458	0.67605	72.588	72.308	72.984	0.13063					46	23	3	0	0	0	0.76764	1	6671	6671		34.173	6.2903	1	180930			54691	11456	36494	36509	61964	61964					0.055572046173210765
SLPPVKRRRMN	11	Unmodified	_SLPPVKRRRMN_					0	0	0		ENST00000494981.1_1_14:105935406-105936549:+|nuORF;ENST00000481635.1_1_14:105935922-105936549:+|nuORF;ENST00000552286.5_1_14:105932689-105936549:+|nuORF;ENST00000481206.1_1_14:105935538-105936549:+|nuORF;nc|ENSG00000182979|Q13330-3|MTA1;ENSG00000182979|ENST00000331320|MTA1	ENST00000494981.1_1_14:105935406-105936549:+|nuORF	ENST00000494981.1_1_14:105935406-105936549:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9328308105469	3	451.934712	1352.78231	-1.018	-0.00046007	-3.4458	-0.0015573	-4.4638	-0.0020174	451.9330395027802	99.241	2.1396	99.241	98.063	100.2	0					134	52	3	0	0	0	0.75121	1	10027	10027		21.78	2.5177	1	190490			54692	7489	36495	36510	61965	61965					0.1200269910480074
SLPRAALPALL	11	Unmodified	_SLPRAALPALL_					0	0	0		ENST00000258526.8_1_12:94542512-94542695:+|nuORF	ENST00000258526.8_1_12:94542512-94542695:+|nuORF	ENST00000258526.8_1_12:94542512-94542695:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.3556518554688	2	561.355691	1120.69683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.905	1	21.848	21.348	22.348	-0.057203								0	0	0	0.56276	1	642	642		14.137	0	1				54693	9371	36496	36511	61966	61966					0.14130857190775714
SLPRLGAHPEL	11	Unmodified	_SLPRLGAHPEL_					0	0	0			REV__ENSG00000180921|ENST00000388913|FAM83H	REV__ENSG00000180921|ENST00000388913|FAM83H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	595.3367919921875	2	595.33803	1188.66151	-0.59139	-0.00035207	-0.83555	-0.00049744	-1.4269	-0.00084951	595.3374337645155	110.42	0.9267	110.36	110.16	111.09	-0.055084					71	32	3	0	0	0	0.69995	1	12003	12003		31.53	4.8369	1	839650	+		54694	22428	36497	36512	61967	61967					0.07472194662977927
SLPRLGAHPEL	11	Unmodified	_SLPRLGAHPEL_					0	0	0			REV__ENSG00000180921|ENST00000388913|FAM83H	REV__ENSG00000180921|ENST00000388913|FAM83H	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	595.33803	1188.66151	-0.21669	-0.000129	-1.2218	-0.00072736	-1.4384	-0.00085636	595.3372041338255	110.38	0.70287	110.38	110.19	110.89	0	0.119	0.00048572	NaN	31.53	32	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147920	+		54695	22428	36497	36512							0.07472194662977927
SLPRLGAHPEL	11	Unmodified	_SLPRLGAHPEL_					0	0	0			REV__ENSG00000180921|ENST00000388913|FAM83H	REV__ENSG00000180921|ENST00000388913|FAM83H	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	595.33803	1188.66151	-0.59139	-0.00035207	-0.83555	-0.00049744	-1.4269	-0.00084951	595.3374337645155	110.42	0.9267	110.36	110.16	111.09	-0.055084	0.094552	0.00094556	NaN	31.53	71	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	839650	+		54696	22428	36497	36512							0.07472194662977927
SLPRLGAHPEL	11	Unmodified	_SLPRLGAHPEL_					0	0	0			REV__ENSG00000180921|ENST00000388913|FAM83H	REV__ENSG00000180921|ENST00000388913|FAM83H	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	595.33803	1188.66151	3.3262	0.0019802	-4.795	-0.0028547	-1.4688	-0.00087443	595.3350343090502	110.37	0.91768	110.34	110.19	111.11	-0.027641	0.07589	-0.0037689	NaN	31.53	55	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	638180	+		54697	22428	36497	36512							0.07472194662977927
SLPRLGAHPEL	11	Unmodified	_SLPRLGAHPEL_					0	0	0			REV__ENSG00000180921|ENST00000388913|FAM83H	REV__ENSG00000180921|ENST00000388913|FAM83H	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	595.33803	1188.66151	-0.55522	-0.00033055	-0.95829	-0.00057051	-1.5135	-0.00090105	595.3373071971348	110.28	0.8889	110.31	110.15	111.04	0.031738	0.044556	0.00079943	NaN	31.53	60	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	633810	+		54698	22428	36497	36512							0.07472194662977927
SLPRLGAHPEL	11	Unmodified	_SLPRLGAHPEL_					0	0	0			REV__ENSG00000180921|ENST00000388913|FAM83H	REV__ENSG00000180921|ENST00000388913|FAM83H	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	595.33803	1188.66151	0.89581	0.00053331	-1.8583	-0.0011063	-0.96247	-0.00057299	595.3368135174659	110.16	0.68257	110.23	110.11	110.79	0.073685	-0.031059	-0.00027216	NaN	31.53	25	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	317600	+		54699	22428	36497	36512							0.07472194662977927
SLPRLGAHPEL	11	Unmodified	_SLPRLGAHPEL_					0	0	0			REV__ENSG00000180921|ENST00000388913|FAM83H	REV__ENSG00000180921|ENST00000388913|FAM83H	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	595.33803	1188.66151	-1.3046	-0.0007767	0.59709	0.00035547	-0.70754	-0.00042123	595.3383554115329	110.21	0.26416	110.2	110.06	110.32	-0.0023193	-0.060902	0.0026514	NaN	31.53	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122630	+		54700	22428	36497	36512							0.07472194662977927
SLPRLGAHPEL	11	Unmodified	_SLPRLGAHPEL_					0	0	0			REV__ENSG00000180921|ENST00000388913|FAM83H	REV__ENSG00000180921|ENST00000388913|FAM83H	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	595.33803	1188.66151	2.1433	0.001276	-2.934	-0.0017467	-0.79078	-0.00047078	595.3365817567854	109.97	0.13597	110.02	109.91	110.04	0.054062	-0.24204	-0.001553	NaN	31.53	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	470930	+		54701	22428	36497	36512							0.07472194662977927
SLPRLQSLRVP	11	Unmodified	_SLPRLQSLRVP_					0	0	0		nc|ENSG00000141497|Q9H091-2|ZMYND15;ENSG00000141497|ENST00000433935|ZMYND15;nc|ENSG00000141497|Q9H091-3|ZMYND15	nc|ENSG00000141497|Q9H091-2|ZMYND15	nc|ENSG00000141497|Q9H091-2|ZMYND15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.8870849609375	2	633.388054	1264.76155	-0.63154	-0.00040001	-3.8799	-0.0024575	-4.5114	-0.0028575	633.8870038105455	52.683	1.3341	52.659	51.938	53.273	-0.023849					46	32	2	0	0	0	0.74771	1	4645	4645		8.6937	0	1	73278			54702	4505	36498	36513	61968	61968					0.13976431996775318
SLPRLQSLRVP	11	Unmodified	_SLPRLQSLRVP_					0	0	0		nc|ENSG00000141497|Q9H091-2|ZMYND15;ENSG00000141497|ENST00000433935|ZMYND15;nc|ENSG00000141497|Q9H091-3|ZMYND15	nc|ENSG00000141497|Q9H091-2|ZMYND15	nc|ENSG00000141497|Q9H091-2|ZMYND15	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5927734375	3	422.594461	1264.76155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.104	1	55.078	54.578	55.578	-0.025955								0	0	0	0.56276	1	5001	5001		18.531	3.1979	1				54703	4505	36498	36513	61969	61969					0.13976431996775318
SLPRLQSLRVP	11	Unmodified	_SLPRLQSLRVP_					0	0	0		nc|ENSG00000141497|Q9H091-2|ZMYND15;ENSG00000141497|ENST00000433935|ZMYND15;nc|ENSG00000141497|Q9H091-3|ZMYND15	nc|ENSG00000141497|Q9H091-2|ZMYND15	nc|ENSG00000141497|Q9H091-2|ZMYND15	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.3848876953125	2	633.388054	1264.76155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.986	1	58.955	58.455	59.455	-0.030888								0	0	0	0.56276	1	5506	5506		12.207	0	1				54704	4505	36498	36513	61970	61970					0.13976431996775318
SLPRLQSLRVP	11	Unmodified	_SLPRLQSLRVP_					0	0	0		nc|ENSG00000141497|Q9H091-2|ZMYND15;ENSG00000141497|ENST00000433935|ZMYND15;nc|ENSG00000141497|Q9H091-3|ZMYND15	nc|ENSG00000141497|Q9H091-2|ZMYND15	nc|ENSG00000141497|Q9H091-2|ZMYND15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.886962890625	2	633.388054	1264.76155	-0.18394	-0.0001165	-4.2182	-0.0026717	-4.4021	-0.0027882	633.3853758780649	57.013	1.0689	57.046	56.666	57.735	0.033184					61	35	2	0	0	0	0.68177	1	5185	5185		25.126	0.92324	1	142320			54705	4505	36498	36513	61971	61971					0.13976431996775318
SLPSGSPVLL	10	Unmodified	_SLPSGSPVLL_					0	0	0		ENST00000257963.8_1_12:52390012-52390156:+|nuORF	ENST00000257963.8_1_12:52390012-52390156:+|nuORF	ENST00000257963.8_1_12:52390012-52390156:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.2879638671875	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.767	1	77.716	77.216	78.216	-0.050789								0	0	0	0.45132	1	7732	7732		29.15	0.89528	1				54706	9364	36499	36514	61972	61972					0.06871224728752168
SLPSGSPVLL	10	Unmodified	_SLPSGSPVLL_					0	0	0		ENST00000257963.8_1_12:52390012-52390156:+|nuORF	ENST00000257963.8_1_12:52390012-52390156:+|nuORF	ENST00000257963.8_1_12:52390012-52390156:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.28521728515625	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.412	1	78.463	77.963	78.963	0.051674								0	0	0	0.45132	1	7707	7707		37.159	2.9866	1				54707	9364	36499	36514	61973	61973					0.06871224728752168
SLPSLLVAL	9	Unmodified	_SLPSLLVAL_					0	0	0			REV__nc|ENSG00000167210|Q8IVV2|LOXHD1	REV__nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7929382324219	2	456.791861	911.569169	-0.077665	-3.5477E-05	3.236	0.0014782	3.1584	0.0014427	456.79322700683537	35.356	1.7647	35.603	35.091	36.856	0.24769					159	44	4	0	0	0	0.7932	1	2662	2662		25.45	1.2474	1	6766600	+		54708	21369	36500	36515	61974	61974					0.10984716596760791
SLPSLLVN	8	Unmodified	_SLPSLLVN_					0	0	0			REV__ENSG00000132386|ENST00000254722|SERPINF1	REV__ENSG00000132386|ENST00000254722|SERPINF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.75152587890625	2	421.752736	841.490919	0.038992	1.6445E-05	-1.6915	-0.00071338	-1.6525	-0.00069693	421.7514189748159	77.551	3.9456	78.119	76.03	79.975	0.56835					161	100	3	0	0	0	0.89494	1	8742	8742		37.159	0	1	329070	+	+	54709	19000	36501	36516	61975	61975					0.06383284011531032
SLPSVAIGEP	10	Unmodified	_SLPSVAIGEP_					0	0	0			REV__nc|ENSG00000183337|Q6W2J9-3|BCOR	REV__nc|ENSG00000183337|Q6W2J9-3|BCOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.26806640625	2	485.266207	968.517862	-0.8809	-0.00042747	-1.7168	-0.00083312	-2.5977	-0.0012606	485.26525209052494	43.295	1.2543	43.728	43.419	44.674	0.4334					80	30	5	0	0	0	0.5766	1	3934	3934		51.335	0	1	9714800	+		54710	22598	36502	36517	61976	61976					0.032343478320512986
SLPSVAIGEP	10	Unmodified	_SLPSVAIGEP_					0	0	0			REV__nc|ENSG00000183337|Q6W2J9-3|BCOR	REV__nc|ENSG00000183337|Q6W2J9-3|BCOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2663269042969	2	485.266207	968.517862	-2.0518	-0.00099565	0.052784	2.5614E-05	-1.999	-0.00097004	485.2661299118407	43.069	1.5352	43.843	43.54	45.075	0.7738					84	37	4	0	0	0	0.31414	1	3872	3872		71.296	7.9894	1	9449200	+		54711	22598	36502	36517	61977	61977					0.032343478320512986
SLPVAYLL	8	Unmodified	_SLPVAYLL_					0	0	0			REV__ENST00000503000.1_1_4:2332191-2332611:-|nuORF	REV__ENST00000503000.1_1_4:2332191-2332611:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.262451171875	2	438.265479	874.516405	-1.8646	-0.00081717	-3.5126	-0.0015394	-5.3771	-0.0023566	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.83466	1	2966	2966		23.037	1.3344	1	3384400	+		54712	27834	36503	36518	61978	61978					0.07412758533939723
SLPVAYLL	8	Unmodified	_SLPVAYLL_					0	0	0			REV__ENST00000503000.1_1_4:2332191-2332611:-|nuORF	REV__ENST00000503000.1_1_4:2332191-2332611:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2629699707031	2	438.265479	874.516405	-1.2142	-0.00053214	-3.9242	-0.0017198	-5.1384	-0.002252	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.87276	1	3394	3394		29.842	8.1392	1	4828000	+		54713	27834	36503	36518	61979	61979					0.07412758533939723
SLPVHNKT	8	Unmodified	_SLPVHNKT_					0	0	0		ENSG00000214929|ENST00000344803|SPATA31D1	ENSG00000214929|ENST00000344803|SPATA31D1	ENSG00000214929|ENST00000344803|SPATA31D1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.3067321777344	2	448.253434	894.492316	0.065189	2.9221E-05	0.39775	0.00017829	0.46294	0.00020751	448.25364744815965	21.327	0.64491	20.699	20.409	21.054	-0.62835					25	17	2	0	0	0	0.4196	1	761	761		12.812	0	1	47358			54714	8641	36504	36519	61980	61980					0.04084918100284085
SLPWRVVIG	9	Unmodified	_SLPWRVVIG_					0	0	0		ENSG00000123066|ENST00000281928|MED13L;ENSG00000108510|ENST00000397786|MED13	ENSG00000123066|ENST00000281928|MED13L;ENSG00000108510|ENST00000397786|MED13	ENSG00000123066|ENST00000281928|MED13L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.80859375	2	513.808377	1025.6022	0.34332	0.0001764	0.75485	0.00038785	1.0982	0.00056425	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.69624	1	3739	3739		40.778	1.972	1	1306000			54715	3258;2411	36505	36520	61981	61981					0.0904234343945518
SLQAQYRA	8	Unmodified	_SLQAQYRA_					0	0	0		ENST00000427859.5_1_1:239870879-239871044:-|nuORF	ENST00000427859.5_1_1:239870879-239871044:-|nuORF	ENST00000427859.5_1_1:239870879-239871044:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.74615478515625	2	468.748516	935.482479	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.968	1	65.093	64.593	65.593	0.12545								0	0	0	0.30305	1	5746	5746		42.396	3.59	1				54716	11586	36506	36521	61982	61982					0.01215730094884293
SLQDTKITL	9	Unmodified	_SLQDTKITL_					0	0	0		ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.7923278808594	2	509.792589	1017.57063	-0.014535	-7.4098E-06	-0.42761	-0.00021799	-0.44215	-0.0002254	509.79234442663346	55.706	1.0895	55.696	55.119	56.208	-0.010136					92	29	5	0	0	0	3.9786E-29	8	4984	4945;4957;4967;4976;4984;4993;5002;5012		190.62	27.472	1	5897200			54717	1521	36507	36522	61983;61984;61985;61986;61987;61988;61989;61990	61987					0.06254305894833578
SLQDTKITL	9	Unmodified	_SLQDTKITL_					0	0	0		ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.7923278808594	2	509.792589	1017.57063	-0.17968	-9.1599E-05	-0.53192	-0.00027117	-0.7116	-0.00036277	509.79233776485523	55.684	0.9234	55.656	55.256	56.18	-0.027279					81	26	4	0	0	0	3.2324E-20	6	5087	5079;5087;5095;5104;5115;5137		177.3	26.943	1	6347800			54718	1521	36507	36522	61991;61992;61993;61994;61995;61996	61992					0.06254305894833578
SLQDTKITL	9	Unmodified	_SLQDTKITL_					0	0	0		ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.7923583984375	2	509.792589	1017.57063	-0.84186	-0.00042918	0.098611	5.0271E-05	-0.74325	-0.0003789	509.7926689474763	55.638	0.91766	55.669	55.291	56.209	0.030838					81	24	5	0	0	0	1.8502E-13	7	5000	4981;4992;5000;5010;5019;5029;5051		169.65	29.682	1	6603600			54719	1521	36507	36522	61997;61998;61999;62000;62001;62002;62003	61999					0.06254305894833578
SLQGPQWQSV	10	Unmodified	_SLQGPQWQSV_					0	0	0		nc|ENSG00000204991|Q8WWL2-4|SPIRE2;nc|ENSG00000204991|Q8WWL2-3|SPIRE2;nc|ENSG00000204991|Q8WWL2-2|SPIRE2;ENST00000569108.5_1_16:89916567-89936677:+|nuORF;ENSG00000204991|ENST00000378247|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	565.2853393554688	2	565.285463	1128.55637	-1.1582	-0.00065471	0.85785	0.00048493	-0.30034	-0.00016978	565.2857053012276	51.426	0.68999	51.424	51.055	51.745	-0.0020447					24	15	2	0	0	0	0.4503	1	4391	4391		59.931	9.8973	1	118660			54720	8506	36508	36523	62004	62004					-0.002763465334510329
SLQLQHLPP	9	Unmodified	_SLQLQHLPP_					0	0	0		nc|ENSG00000075826|Q9NQW1-5|SEC31B;ENSG00000075826|ENST00000370345|SEC31B	nc|ENSG00000075826|Q9NQW1-5|SEC31B	nc|ENSG00000075826|Q9NQW1-5|SEC31B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7931518554688	2	516.795466	1031.57638	-1.5587	-0.00080555	-2.3442	-0.0012115	-3.9029	-0.002017	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.7932	1	8743	8743		24.519	0	1	755180			54721	1344	36509	36524	62005	62005					0.061854491971644165
SLQPNENL	8	Unmodified	_SLQPNENL_					0	0	0			REV__ENSG00000033030|ENST00000633063|ZCCHC8	REV__ENSG00000033030|ENST00000633063|ZCCHC8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.2166442871094	2	457.732532	913.45051	0.12761	5.8411E-05	-0.10638	-4.8693E-05	0.02123	9.7176E-06	457.7324191080723	30.194	0.69272	30.104	29.749	30.442	-0.089544					32	15	3	0	0	0	0.4196	1	1940	1940		21.96	0	1	469770	+		54722	16280	36510	36525	62006	62006					-0.009676823789163791
SLQRGVNE	8	Unmodified	_SLQRGVNE_					0	0	0		ENSG00000177542|ENST00000628067|SLC25A22	ENSG00000177542|ENST00000628067|SLC25A22	ENSG00000177542|ENST00000628067|SLC25A22	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7402038574219	2	451.738148	901.461744	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.497	1	30.482	29.982	30.982	-0.015167								0	0	0	0.29	1	1604	1604		53.351	2.016	1				54723	7146	36511	36526	62007	62007					0.007071397152344616
SLQYSTVS	8	Unmodified	_SLQYSTVS_					0	0	0			REV__nc|ENSG00000111319|P37088-4|SCNN1A	REV__nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.72247314453125	2	442.721633	883.428712	0.37013	0.00016386	1.948	0.00086243	2.3181	0.0010263	442.7222188277578	27.775	1.2287	27.811	27.475	28.704	0.03607					60	39	2	0	0	0	0.92457	1	1262	1262		47.916	12.715	1	168890	+		54724	17863	36512	36527	62008	62008					-0.017664871274632787
SLQYSTVS	8	Unmodified	_SLQYSTVS_					0	0	0			REV__nc|ENSG00000111319|P37088-4|SCNN1A	REV__nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.72265625	2	442.721633	883.428712	-0.33299	-0.00014742	2.5599	0.0011333	2.2269	0.0009859	442.7224617951711	27.796	1.1706	27.758	27.434	28.605	-0.038523					64	27	3	0	0	0	0.87259	1	1365	1365		58.782	8.7574	1	142800	+		54725	17863	36512	36527	62009	62009					-0.017664871274632787
SLQYSTVS	8	Unmodified	_SLQYSTVS_					0	0	0			REV__nc|ENSG00000111319|P37088-4|SCNN1A	REV__nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.7228088378906	2	442.721633	883.428712	1.3757	0.00060905	0.9152	0.00040518	2.2909	0.0010142	442.72174062194034	27.904	1.1856	27.881	27.606	28.792	-0.023556					62	28	3	0	0	0	0.91977	1	1299	1299		45.952	5.1738	1	143380	+		54726	17863	36512	36527	62010	62010					-0.017664871274632787
SLQYSTVS	8	Unmodified	_SLQYSTVS_					0	0	0			REV__nc|ENSG00000111319|P37088-4|SCNN1A	REV__nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	442.721633	883.428712	1.3757	0.00060905	0.9152	0.00040518	2.2909	0.0010142	442.72174062194034	27.904	1.1856	27.881	27.606	28.792	-0.023556	0.064388	-0.00066644	NaN	58.782	62	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143380	+		54727	17863	36512	36527							-0.017664871274632787
SLRAAEPNSF	10	Unmodified	_SLRAAEPNSF_					0	0	0		ENST00000508176.1_1_5:147820712-147820817:+|nuORF;nc|ENSG00000145868|Q6PIJ6-3|FBXO38;nc|ENSG00000145868|Q6PIJ6-2|FBXO38;ENSG00000145868|ENST00000340253|FBXO38	ENST00000508176.1_1_5:147820712-147820817:+|nuORF	ENST00000508176.1_1_5:147820712-147820817:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.2777709960938	2	546.277638	1090.54072	-0.2202	-0.00012029	3.5856	0.0019588	3.3654	0.0018385	546.2796347940589	49.481	0.73845	49.478	49.136	49.875	-0.0030327					32	16	3	0	0	0	0.69342	1	4142	4142		45.022	0.9054	1	126560			54728	4800	36513	36528	62011	62011					-0.0009263305048534676
SLRCSSKQAKR	11	Unmodified	_SLRCSSKQAKR_					0	0	0		nc|ENSG00000173166|Q70E73-7|RAPH1;nc|ENSG00000173166|Q70E73-3|RAPH1;nc|ENSG00000173166|Q70E73-9|RAPH1;nc|ENSG00000173166|Q70E73-6|RAPH1	nc|ENSG00000173166|Q70E73-7|RAPH1	nc|ENSG00000173166|Q70E73-7|RAPH1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.52996826171875	3	421.903189	1262.68774	-0.40518	-0.00017095	-1.2928	-0.00054544	-1.698	-0.00071639	421.902496550309	18.38	0.22256	18.303	18.182	18.404	-0.07671					9	5	2	0	0	0	0.17302	1	285	285		39.873	20.61	1	11515			54729	15100	36514	36529	62012	62012					0.06690140562795932
SLRDDTSF	8	Unmodified	_SLRDDTSF_					0	0	0		nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7200622558594	2	470.722164	939.429775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.374	1	20.304	19.804	20.804	-0.070013								0	0	0	0.29857	1	508	508		39.253	0.23134	1				54730	2532	36515	36530	62013	62013					-0.042362727585668836
SLRGLKSR	8	Unmodified	_SLRGLKSR_					0	0	0		ENST00000591254.1_1_19:12841477-12841717:-|nuORF	ENST00000591254.1_1_19:12841477-12841717:-|nuORF	ENST00000591254.1_1_19:12841477-12841717:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.7878723144531	2	458.787976	915.561398	0.69325	0.00031806	-1.7567	-0.00080595	-1.0635	-0.0004879	458.78715906372344	92.966	2.4091	93.125	92.453	94.862	0.15874					174	57	5	0	0	0	0.88185	1	9513	9513		32.812	3.6629	1	14401000			54731	14269	36516	36531	62014	62014					0.10024002119848774
SLRGLRRTMSL	11	Unmodified	_SLRGLRRTMSL_					0	0	0		ENST00000559630.1_1_15:49097750-49103222:-|nuORF;ENST00000559444.1_1_15:49090143-49103222:-|nuORF	ENST00000559630.1_1_15:49097750-49103222:-|nuORF	ENST00000559630.1_1_15:49097750-49103222:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.5859375	3	430.587201	1288.73977	1.3367	0.00057555	-2.3745	-0.0010224	-1.0378	-0.00044687	430.58510468313744	33.698	1.0363	34.003	33.617	34.653	0.30494					80	24	5	0	0	0	0.64964	1	2487	2487		38.714	7.6459	1	1577500			54732	13808	36517	36532	62015	62015					0.10695303976581272
SLRGRGRR	8	Unmodified	_SLRGRGRR_					0	0	0		ENST00000243440.1_1_1:212870399-212873318:-|nuORF	ENST00000243440.1_1_1:212870399-212873318:-|nuORF	ENST00000243440.1_1_1:212870399-212873318:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.29534912109375	2	479.294291	956.574029	-0.82613	-0.00039596	-2.0464	-0.00098082	-2.8725	-0.0013768	479.2941454084247	110.97	0.69313	110.97	110.79	111.48	0					40	22	3	0	0	0	0.79929	1	11537	11537		18.324	0	1	31613			54733	9259	36518	36533	62016	62016					0.09400458302741299
SLRITRLCRCH	11	Unmodified	_SLRITRLCRCH_					0	0	0			REV__ENSG00000158077|ENST00000299481|NLRP14	REV__ENSG00000158077|ENST00000299481|NLRP14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.2486572265625	3	453.248302	1356.72308	0.79221	0.00035907	1.5869	0.00071924	2.3791	0.0010783	453.24893502220635	24.05	1.229	24.007	23.603	24.832	-0.043221					89	31	4	0	0	0	0.74022	1	859	859		24.232	1.6522	1	177000	+		54734	20585	36519	36534	62017	62017					0.05898479818984015
SLRKHQRVH	9	Unmodified	_SLRKHQRVH_					0	0	0		ENSG00000179909|ENST00000684351|ZNF154	ENSG00000179909|ENST00000684351|ZNF154	ENSG00000179909|ENST00000684351|ZNF154	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.8402709960938	2	580.841605	1159.66866	0.60129	0.00034925	-2.4927	-0.0014479	-1.8914	-0.0010986	580.839949137506	69.631	0.83281	69.76	69.457	70.29	0.1291					104	40	3	0	0	0	0.7932	1	6358	6358		25.574	2.0514	1	14222000			54735	7301	36520	36535	62018	62018					0.09520972054087906
SLRKMLLSVF	10	Unmodified	_SLRKMLLSVF_					0	0	0			REV__ENST00000442739.1_1_22:21363397-21363730:-|nuORF	REV__ENST00000442739.1_1_22:21363397-21363730:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3582153320312	2	597.357376	1192.7002	3.0849	0.0018428	-1.397	-0.00083449	1.688	0.0010083	597.3562180293547	100.36	3.052	100.31	99.202	102.25	-0.052116					175	71	4	0	0	0	0.86218	1	10912	10912		32.812	4.9302	1	3981300	+		54736	26773	36521	36536	62019	62019					0.11155783973140387
SLRKVRKKGRR	11	Unmodified	_SLRKVRKKGRR_					0	0	0			REV__nc|ENSG00000146966|Q9ULE3-2|DENND2A	REV__nc|ENSG00000146966|Q9ULE3-2|DENND2A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.94866943359375	3	461.975899	1382.90587	0.76553	0.00035366	-4.4324	-0.0020477	-3.6669	-0.001694	462.308118969556	107.64	0.16717	107.74	107.63	107.8	0.091255					5	3	2	0	0	0	0.17648	1	11572	11572		11.455	0	1	87962	+		54737	29919	36522	36537	62020	62020					0.22973118267418613
SLRKVTKKLFV	11	Unmodified	_SLRKVTKKLFV_					0	0	0		ENST00000565846.2_1_15:56485023-56485380:-|nuORF	ENST00000565846.2_1_15:56485023-56485380:-|nuORF	ENST00000565846.2_1_15:56485023-56485380:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.29290771484375	3	440.29049	1317.84964	-0.14762	-6.4996E-05	4.4487	0.0019587	4.3011	0.0018937	440.29224154688933	58.12	1.3783	58.106	57.522	58.9	-0.013641					131	47	4	0	0	0	0.75457	1	5254	5254		21.032	6.3386	1	235220			54738	13924	36523	36538	62021	62021					0.20343052587395505
SLRKVTKKLFV	11	Unmodified	_SLRKVTKKLFV_					0	0	0		ENST00000565846.2_1_15:56485023-56485380:-|nuORF	ENST00000565846.2_1_15:56485023-56485380:-|nuORF	ENST00000565846.2_1_15:56485023-56485380:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2922058105469	3	440.29049	1317.84964	-0.12551	-5.5261E-05	4.425	0.0019483	4.2995	0.001893	440.29228151572136	58.121	1.3606	58.091	57.557	58.917	-0.029865					98	39	4	0	0	0	0.76892	1	5406	5406		17.833	6.1972	1	263280			54739	13924	36523	36538	62022	62022					0.20343052587395505
SLRKVTKKLFV	11	Unmodified	_SLRKVTKKLFV_					0	0	0		ENST00000565846.2_1_15:56485023-56485380:-|nuORF	ENST00000565846.2_1_15:56485023-56485380:-|nuORF	ENST00000565846.2_1_15:56485023-56485380:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	440.29049	1317.84964	0.35447	0.00015607	3.8111	0.001678	4.1656	0.0018341	440.2919905840395	57.84	1.0591	57.95	57.567	58.627	0.11027	-0.11305	-0.0010542	NaN	21.032	127	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	385740			54740	13924	36523	36538							0.20343052587395505
SLRKVTKKLFV	11	Unmodified	_SLRKVTKKLFV_					0	0	0		ENST00000565846.2_1_15:56485023-56485380:-|nuORF	ENST00000565846.2_1_15:56485023-56485380:-|nuORF	ENST00000565846.2_1_15:56485023-56485380:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	440.29049	1317.84964	-0.73952	-0.0003256	4.7923	0.00211	4.0528	0.0017844	440.2924712639509	57.953	1.1085	57.936	57.472	58.58	-0.01643	-0.12673	0.00024191	NaN	21.032	124	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	311310			54741	13924	36523	36538							0.20343052587395505
SLRLNHKEVRL	11	Unmodified	_SLRLNHKEVRL_					0	0	0		nc|ENSG00000134909|A7KAX9|ARHGAP32;ENSG00000134909|ENST00000682385|ARHGAP32;nc|ENSG00000134909|A7KAX9-2|ARHGAP32	nc|ENSG00000134909|A7KAX9|ARHGAP32	nc|ENSG00000134909|A7KAX9|ARHGAP32	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6082763671875	3	455.608882	1363.80482	-0.20528	-9.3526E-05	-0.84962	-0.00038709	-1.0549	-0.00048062	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.72892	1	7591	7591		26.75	0	1	1835000			54742	3971	36524	36539	62023	62023					0.13746621774066625
SLRLRRVHVC	10	Unmodified	_SLRLRRVHVC_					0	0	0		ENSG00000116176|ENST00000234798|TPSG1	ENSG00000116176|ENST00000234798|TPSG1	ENSG00000116176|ENST00000234798|TPSG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.869140625	2	619.866766	1237.71898	1.6172	0.0010025	2.4177	0.0014986	4.0349	0.0025011	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.85466	2	11287	11180;11287		34.173	0.95016	1	1541100			54743	2905	36525	36540	62024;62025	62025					0.10962758387563554
SLRPHPCLLL	10	Unmodified	_SLRPHPCLLL_					0	0	0			REV__ENST00000322522.8_1_2:191208616-191224765:+|nuORF	REV__ENST00000322522.8_1_2:191208616-191224765:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.83837890625	2	574.834069	1147.65358	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.332	1	34.286	33.786	34.786	-0.045815								0	0	0	0.45132	1	1722	1722		39.253	3.6345	1		+		54744	25024	36526	36541	62026	62026					0.0856634414187738
SLRPRLVASRP	11	Unmodified	_SLRPRLVASRP_					0	0	0			REV__ENST00000610263.1_1_10:93667965-93668834:+|nuORF	REV__ENST00000610263.1_1_10:93667965-93668834:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.8909301757812	2	626.385845	1250.75714	-1.2033	-0.00075372	2.5834	0.0016182	1.3801	0.00086446	626.3871390536368	109.94	1.1883	109.95	109.68	110.87	0.0060501					79	40	3	0	0	0	0.7144	1	11714	11714		29.17	7.2102	1	879220	+		54745	29428	36527	36542	62027	62027					0.14178967573889167
SLRPRLVASRP	11	Unmodified	_SLRPRLVASRP_					0	0	0			REV__ENST00000610263.1_1_10:93667965-93668834:+|nuORF	REV__ENST00000610263.1_1_10:93667965-93668834:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.8922119140625	2	626.385845	1250.75714	2.3128	0.0014487	-2.3561	-0.0014758	-0.043276	-2.7107E-05	626.8860681580434	110.01	1.5052	110.06	109.66	111.17	0.054062					106	56	2	0	0	0	0.72106	1	13276	13276		28.081	5.039	1	1083000	+		54746	29428	36527	36542	62028	62028					0.14178967573889167
SLRPVTIRGA	10	Unmodified	_SLRPVTIRGA_					0	0	0			REV__ENSG00000273841|ENST00000217893|TAF9	REV__ENSG00000273841|ENST00000217893|TAF9	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.3265380859375	2	535.327465	1068.64038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.98	1	107.98	107.48	108.48	0								0	0	0	0.45132	1	11243	11243		20.947	0.95016	1		+		54747	23994	36528	36543	62029	62029					0.10880229354143012
SLRQHERSH	9	Unmodified	_SLRQHERSH_					0	0	0		ENSG00000277462|ENST00000366503|ZNF670	ENSG00000277462|ENST00000366503|ZNF670	ENSG00000277462|ENST00000366503|ZNF670	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.2976684570312	2	575.297227	1148.5799	-0.62013	-0.00035676	1.0688	0.00061487	0.44866	0.00025811	575.2976575807905	42.796	0.68694	42.766	42.497	43.184	-0.029461					33	16	3	0	0	0	0.7932	1	3225	3225		23.523	1.5628	1	227850			54748	9021	36529	36544	62030	62030					0.011555120237517258
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3060607910156	3	478.975788	1433.90553	-1.5477	-0.00074132	-1.0231	-0.00049002	-2.5708	-0.0012313	479.3095821584732	53.8	1.0088	53.8	53.251	54.26	0					54	29	2	0	0	0	0.82945	1	4436	4436		7.3413	1.0205	1	89946			54749	13447	36530	36545	62031	62031					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.974365234375	3	478.975788	1433.90553	0.22007	0.00010541	-3.5834	-0.0017164	-3.3634	-0.001611	478.9740845349807	44.981	2.0928	44.958	43.729	45.822	-0.023079					123	48	4	0	0	0	0.78083	1	3549	3549		15.337	0	1	463950			54750	13447	36530	36545	62032	62032					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9744567871094	3	478.975788	1433.90553	0.29105	0.00013941	-3.0181	-0.0014456	-2.7271	-0.0013062	478.97423168771354	46.414	2.0111	46.452	45.233	47.244	0.038185					138	54	3	0	0	0	0.82431	1	3452	3452		7.6794	1.9806	1	395190			54751	13447	36530	36545	62033	62033					0.20593698547577333
SLRQRPDKTL	10	Unmodified	_SLRQRPDKTL_					0	0	0			REV__ENSG00000163482|ENST00000295709|STK36	REV__ENSG00000163482|ENST00000295709|STK36	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.2356262207031	3	405.238566	1212.69387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.411	1	63.377	62.877	63.877	-0.033714								0	0	0	0.45132	1	6015	6015		28.577	1.827	1		+		54752	20920	36531	36546	62034	62034					0.09602982065985088
SLRQRPDKTL	10	Unmodified	_SLRQRPDKTL_					0	0	0			REV__ENSG00000163482|ENST00000295709|STK36	REV__ENSG00000163482|ENST00000295709|STK36	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.2378845214844	3	405.238566	1212.69387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.619	1	63.585	63.085	64.085	-0.034126								0	0	0	0.45132	1	6042	6042		22.562	7.2285	1		+		54753	20920	36531	36546	62035	62035					0.09602982065985088
SLRRTRLQQQK	11	Unmodified	_SLRRTRLQQQK_					0	0	0		nc|ENSG00000197771|Q9BTE3-3|MCMBP;ENSG00000197771|ENST00000369077|MCMBP;nc|ENSG00000197771|Q9BTE3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.29315185546875	3	471.951419	1412.83243	3.4182	0.0016132	-2.859	-0.0013493	0.55922	0.00026393	471.95004401513967	105.96	1.221	106.15	105.65	106.87	0.18647					86	48	3	0	0	0	0.75121	1	12946	12946		21.78	3.9473	1	219940			54754	8197	36532	36547	62036	62036					0.14252525034294194
SLRRTRLQQQK	11	Unmodified	_SLRRTRLQQQK_					0	0	0		nc|ENSG00000197771|Q9BTE3-3|MCMBP;ENSG00000197771|ENST00000369077|MCMBP;nc|ENSG00000197771|Q9BTE3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	471.951419	1412.83243	-0.10792	-5.0932E-05	1.6067	0.00075826	1.4987	0.00070733	471.95176276281217	106.06	1.7747	106.04	105.27	107.05	-0.025146	-0.0041675	0.0032445	NaN	21.78	124	41	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	458140			54755	8197	36532	36547							0.14252525034294194
SLRRTRLQQQK	11	Unmodified	_SLRRTRLQQQK_					0	0	0		nc|ENSG00000197771|Q9BTE3-3|MCMBP;ENSG00000197771|ENST00000369077|MCMBP;nc|ENSG00000197771|Q9BTE3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	471.951419	1412.83243	2.8024	0.0013226	-1.4234	-0.0006718	1.3789	0.00065079	471.9504000356772	105.99	1.8212	105.95	105.19	107.01	-0.037148	-0.086449	-0.0010456	NaN	21.78	124	42	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	665890			54756	8197	36532	36547							0.14252525034294194
SLRRTRLQQQK	11	Unmodified	_SLRRTRLQQQK_					0	0	0		nc|ENSG00000197771|Q9BTE3-3|MCMBP;ENSG00000197771|ENST00000369077|MCMBP;nc|ENSG00000197771|Q9BTE3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	471.951419	1412.83243	-0.0031052	-1.4655E-06	1.452	0.00068526	1.4489	0.0006838	471.9517089063083	105.89	1.732	105.92	105.12	106.85	0.03833	-0.11724	0.0030255	NaN	21.78	101	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	606600			54757	8197	36532	36547							0.14252525034294194
SLRRTRLQQQK	11	Unmodified	_SLRRTRLQQQK_					0	0	0		nc|ENSG00000197771|Q9BTE3-3|MCMBP;ENSG00000197771|ENST00000369077|MCMBP;nc|ENSG00000197771|Q9BTE3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	471.951419	1412.83243	1.9135	0.00090307	-1.2829	-0.00060547	0.63058	0.0002976	471.9508421580416	105.92	0.88506	106.04	105.62	106.5	0.12742	0.0041897	-0.00084667	NaN	21.78	62	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	247190			54758	8197	36532	36547							0.14252525034294194
SLRSISAAPSA	11	Unmodified	_SLRSISAAPSA_					0	0	0			REV__ENST00000521195.1_1_8:104320096-104343734:+|nuORF	REV__ENST00000521195.1_1_8:104320096-104343734:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2926635742188	2	530.293288	1058.57202	1.6334	0.0008662	-1.7145	-0.0009092	-0.081076	-4.2994E-05	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.57736	1	10641	10641		46.457	13.706	1	1816400	+		54759	21130	36533	36548	62037	62037					0.04507939983614051
SLRSPSKKSQP	11	Unmodified	_SLRSPSKKSQP_					0	0	0			REV__nc|ENSG00000105875|A4D1P6-3|WDR91	REV__nc|ENSG00000105875|A4D1P6-3|WDR91	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.56524658203125	3	405.566571	1213.67788	-0.18878	-7.6562E-05	-4.1815	-0.0016959	-4.3703	-0.0017724	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.72891	1	5940	5940		26.753	11.416	1	257140	+		54760	17578	36534	36549	62038	62038					0.0795927582908007
SLRTAQTQ	8	Unmodified	_SLRTAQTQ_					0	0	0		chr5:1253831-1254368|56|16.38|0.67|4.62|-|2|TERT,TERT|1;nc|ENSG00000164362|O14746-3|TERT;ENSG00000164362|ENST00000310581|TERT	chr5:1253831-1254368|56|16.38|0.67|4.62|-|2|TERT,TERT|1	chr5:1253831-1254368|56|16.38|0.67|4.62|-|2|TERT,TERT|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.8812255859375	2	452.745973	903.477394	0.1648	7.4614E-05	3.8203	0.0017296	3.9851	0.0018042	452.74751107175905	19.038	0.38478	18.408	18.19	18.575	-0.6296					12	8	2	0	0	0	0.4196	1	474	474		58.782	14.665	1	63160			54761	439	36535	36550	62039	62039					0.021794262322941904
SLRTELRN	8	Unmodified	_SLRTELRN_					0	0	0			REV__nc|ENSG00000055118|Q12809-2|KCNH2	REV__nc|ENSG00000055118|Q12809-2|KCNH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7789611816406	2	494.780348	987.546142	-0.60525	-0.00029947	0.35401	0.00017516	-0.25124	-0.00012431	494.7803656183054	83.829	2.2213	83.994	82.644	84.865	0.1651					103	51	3	0	0	0	0.89043	1	8179	8179		35.618	0	1	285340	+		54762	16408	36536	36551	62040	62040					0.051870905319901794
SLSFCDERSC	10	Carbamidomethyl (C)	_SLSFCDERSC(Carbamidomethyl (C))_	SLSFC(0.005)DERSC(0.995)		SLSFC(-23)DERSC(23)		0	1	0			REV__ENST00000409459.5_1_11:95647475-95657214:-|nuORF	REV__ENST00000409459.5_1_11:95647475-95657214:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	602.2418823242188	2	602.24208	1202.46961	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.768	1	27.804	27.304	28.304	0.03607								0	0	0	0.45132	1	1275	1275		40.058	13.365	2		+		54763	26348	36537	36552	62041	62041	320				-0.12352837141816053
SLSGELGASSL	11	Unmodified	_SLSGELGASSL_					0	0	0		ENST00000471408.5_1_12:6649651-6659338:-|nuORF	ENST00000471408.5_1_12:6649651-6659338:-|nuORF	ENST00000471408.5_1_12:6649651-6659338:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.7627868652344	2	510.764029	1019.5135	-0.6505	-0.00033225	-0.13621	-6.9569E-05	-0.7867	-0.00040182	510.76386711052356	39.122	1.0781	39.676	39.319	40.397	0.55449					35	24	3	0	0	0	0.36477	1	3280	3280		62.107	12.571	1	268650			54764	12241	36538	36553	62042	62042					0.004528386184802002
SLSGELGASSL	11	Unmodified	_SLSGELGASSL_					0	0	0		ENST00000471408.5_1_12:6649651-6659338:-|nuORF	ENST00000471408.5_1_12:6649651-6659338:-|nuORF	ENST00000471408.5_1_12:6649651-6659338:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	510.764029	1019.5135	-1.0365	-0.00052942	0.19193	9.803E-05	-0.84459	-0.00043139	510.76413659481096	39.537	1.0539	39.905	39.299	40.353	0.36797	0.11402	0.00013395	NaN	62.107	35	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	174530			54765	12241	36538	36553							0.004528386184802002
SLSGRQLPGT	10	Unmodified	_SLSGRQLPGT_					0	0	0			REV__ENSG00000008300|ENST00000164024|CELSR3	REV__ENSG00000008300|ENST00000164024|CELSR3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.27978515625	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.82886	1	8461	8461		37.812	2.1932	1	1261800	+		54766	16134	36539	36554	62043	62043					0.03911670812135526
SLSKTILN	8	Unmodified	_SLSKTILN_					0	0	0		ENSG00000197748|ENST00000357060|CFAP43;nc|ENSG00000197748|Q8NDM7-2|CFAP43;nc|ENSG00000197748|Q8NDM7-3|CFAP43	ENSG00000197748|ENST00000357060|CFAP43	ENSG00000197748|ENST00000357060|CFAP43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2632751464844	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.86677	1	2210	2210		27.882	0	1	3507500			54767	8194	36540	36555	62044	62044					0.07010669040244011
SLSKVVPFSH	10	Unmodified	_SLSKVVPFSH_					0	0	0		ENST00000477462.5_1_6:31661186-31670930:-|nuORF;ENST00000468037.1_1_6:31660724-31670409:-|nuORF;ENST00000492084.5_1_6:31654991-31670409:-|nuORF;nc|ENSG00000204427|O95870-2|ABHD16A;ENSG00000204427|ENST00000395952|ABHD16A	ENST00000477462.5_1_6:31661186-31670930:-|nuORF	ENST00000477462.5_1_6:31661186-31670930:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.3090209960938	2	550.808574	1099.60259	-1.5611	-0.00085986	-1.905	-0.0010493	-3.4661	-0.0019092	550.8073038939729	29.672	1.5276	29.666	29.02	30.547	-0.0064812					96	34	5	0	0	0	0.86471	1	1924	1924		30.318	3.6248	1	1060600			54768	8442	36541	36556	62045	62045					0.05677718368656315
SLSPALVGV	9	Unmodified	_SLSPALVGV_					0	0	0			REV__ENST00000324866.11_1_11:71806383-71806563:+|nuORF	REV__ENST00000324866.11_1_11:71806383-71806563:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.7524719238281	2	421.752736	841.490919	-1.3243	-0.00055854	-1.5619	-0.00065872	-2.8862	-0.0012173	421.7520402690251	77.66	2.5049	77.66	77.329	79.834	0					160	100	2	0	0	0	0.7932	1	7111	7111		25.45	0	1	184940	+		54769	25052	36542	36557	62046	62046					0.06383284011519663
SLSPALVGV	9	Unmodified	_SLSPALVGV_					0	0	0			REV__ENST00000324866.11_1_11:71806383-71806563:+|nuORF	REV__ENST00000324866.11_1_11:71806383-71806563:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	421.752736	841.490919	-1.3243	-0.00055854	-1.5619	-0.00065872	-2.8862	-0.0012173	421.7520402690251	77.66	2.5049	77.66	77.329	79.834	0	0.074482	-0.0001131	NaN	25.45	160	100	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	184940	+		54770	25052	36542	36557							0.06383284011519663
SLSPPLVSK	9	Unmodified	_SLSPPLVSK_					0	0	0		ENST00000377693.4_1_19:46651525-46663958:+|nuORF	ENST00000377693.4_1_19:46651525-46663958:+|nuORF	ENST00000377693.4_1_19:46651525-46663958:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2821960449219	2	464.279118	926.543683	-1.2193	-0.00056607	-2.2605	-0.0010495	-3.4798	-0.0016156	464.2778554904593	43.54	0.84064	43.99	43.561	44.401	0.45025					44	20	3	0	0	0	0.21969	1	3947	3947		71.877	7.6702	1	1079300			54771	10842	36543	36558	62047	62047					0.07747242074333371
SLSPQSSDL	9	Unmodified	_SLSPQSSDL_					0	0	0			REV__ENSG00000173068|ENST00000380672|BNC2	REV__ENSG00000173068|ENST00000380672|BNC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.2303161621094	2	467.229822	932.445091	-0.2993	-0.00013984	0.55436	0.00025901	0.25506	0.00011917	467.2299347648455	24.431	1.1398	24.385	23.796	24.936	-0.04598					52	25	3	0	0	0	0.51592	1	977	977		51.193	5.2407	1	349350	+		54772	21885	36544	36559	62048	62048					-0.023834059613704994
SLSQEEQL	8	Unmodified	_SLSQEEQL_					0	0	0		ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;ENST00000470300.5_1_1:247027247-247061635:-|nuORF	ENSG00000153207|ENST00000648844|AHCTF1	ENSG00000153207|ENST00000648844|AHCTF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.22991943359375	2	467.229822	932.445091	-0.068521	-3.2015E-05	0.36663	0.0001713	0.2981	0.00013928	467.2298152633158	24.377	0.99719	24.334	23.879	24.876	-0.043221					49	22	3	0	0	0	0.37302	1	869	869		87.754	8.0417	1	314120			54773	5221	36545	36560	62049	62049					-0.023834059613704994
SLSSHFLQRTW	11	Unmodified	_SLSSHFLQRTW_					0	0	0			REV__ENST00000578089.1_1_17:8047106-8049438:-|nuORF	REV__ENST00000578089.1_1_17:8047106-8049438:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.5726013183594	3	454.570204	1360.68878	-0.30019	-0.00013646	4.4145	0.0020067	4.1143	0.0018702	454.5721360794233	29.056	0.42612	29.016	28.785	29.212	-0.039907					34	16	3	0	0	0	0.74771	1	1498	1498		22.562	1.5294	1	33984	+		54774	29018	36546	36561	62050	62050					0.022866782033588606
SLSSWFVD	8	Unmodified	_SLSSWFVD_					0	0	0			REV__ENSG00000110427|ENST00000658780|KIAA1549L	REV__ENSG00000110427|ENST00000658780|KIAA1549L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7214050292969	2	470.724175	939.433798	-0.31514	-0.00014835	-3.3066	-0.0015565	-3.6218	-0.0017049	470.7225235132023	20.393	0.37282	20.324	20.149	20.522	-0.069733					22	15	2	0	0	0	0.90465	1	527	527		40.573	3.4135	1	34459	+		54775	17812	36547	36562	62051	62051					-0.03834183264859803
SLSSWFVD	8	Unmodified	_SLSSWFVD_					0	0	0			REV__ENSG00000110427|ENST00000658780|KIAA1549L	REV__ENSG00000110427|ENST00000658780|KIAA1549L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.2239990234375	2	470.724175	939.433798	-0.31514	-0.00014835	-3.3066	-0.0015565	-3.6218	-0.0017049	470.7225235132023	20.393	0.37282	20.324	20.149	20.522	-0.069733					22	15	2	0	0	0	0.4196	1	518	518		25.45	0	1	34459	+		54776	17812	36547	36562	62052	62052					-0.03834183264859803
SLSTEPAVV	9	Unmodified	_SLSTEPAVV_					0	0	0		ENSG00000140323|ENST00000267889|DISP2	ENSG00000140323|ENST00000267889|DISP2	ENSG00000140323|ENST00000267889|DISP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.7456970214844	2	451.745108	901.475663	0.13129	5.9312E-05	1.6708	0.00075478	1.8021	0.00081409	451.7457782278177	34.466	0.62606	34.41	34.164	34.79	-0.055149					45	25	2	0	0	0	0.5393	1	1738	1738		50.025	5.4935	1	170080			54777	4425	36548	36563	62053	62053					0.020983724236771195
SLTGVQQQL	9	Unmodified	_SLTGVQQQL_					0	0	0		nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;ENSG00000070182|ENST00000644917|SPTB	nc|ENSG00000070182|P11277-3|SPTB	nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.2691345214844	2	487.269281	972.52401	0.34359	0.00016742	-0.37546	-0.00018295	-0.031873	-1.5531E-05	487.2690155191596	29.189	1.2984	29.22	28.385	29.683	0.030947					87	44	3	0	0	0	0.01944	3	1428	1412;1428;1438		125.81	8.9104	1	426640			54778	1234	36549	36564	62054;62055;62056	62055					0.03664866063570571
SLTGVQQQL	9	Unmodified	_SLTGVQQQL_					0	0	0		nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;ENSG00000070182|ENST00000644917|SPTB	nc|ENSG00000070182|P11277-3|SPTB	nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.2691650390625	2	487.269281	972.52401	-0.22717	-0.00011069	0.15177	7.3954E-05	-0.075394	-3.6737E-05	487.26928509198683	29.22	1.6355	29.177	28.715	30.35	-0.043095					107	50	3	0	0	0	0.024351	3	1524	1511;1524;1530		122.18	4.623	1	491070			54779	1234	36549	36564	62057;62058;62059	62058					0.03664866063570571
SLTGVQQQL	9	Unmodified	_SLTGVQQQL_					0	0	0		nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;ENSG00000070182|ENST00000644917|SPTB	nc|ENSG00000070182|P11277-3|SPTB	nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.269287109375	2	487.269281	972.52401	-1.38	-0.00067244	1.2041	0.0005867	-0.17598	-8.5747E-05	487.2698048967584	29.28	1.924	29.261	27.915	29.839	-0.019407					106	57	3	0	0	0	0.0034731	2	1466	1449;1466		138.83	0	1	505130			54780	1234	36549	36564	62060;62061	62061					0.03664866063570571
SLTIDIRR	8	Unmodified	_SLTIDIRR_					0	0	0			REV__ENST00000586720.5_1_17:76967660-76975958:-|nuORF	REV__ENST00000586720.5_1_17:76967660-76975958:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.2925720214844	2	487.293091	972.571629	-0.95023	-0.00046304	1.0703	0.00052155	0.12007	5.8511E-05	487.2934854308046	90.996	2.8908	91.042	90.474	93.365	0.046448					155	69	4	0	0	0	0.89494	1	9487	9487		37.159	9.2769	1	2321800	+		54781	17727	36550	36565	62062	62062					0.08424565054417599
SLTIHIRGHTG	11	Unmodified	_SLTIHIRGHTG_					0	0	0		nc|ENSG00000196437|Q5MCW4-2|ZNF569;ENSG00000196437|ENST00000316950|ZNF569	nc|ENSG00000196437|Q5MCW4-2|ZNF569	nc|ENSG00000196437|Q5MCW4-2|ZNF569	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3328857421875	2	596.333279	1190.652	-0.57959	-0.00034563	-0.049534	-2.9539E-05	-0.62912	-0.00037517	596.3331084008277	96.35	3.5496	96.416	95.306	98.855	0.06591					255	82	4	0	0	0	0.62614	3	10187	10139;10187;10212		41.427	6.1365	1	1242500			54782	8054	36551	36566	62063;62064;62065	62064					0.06430426377460208
SLTIHIRGHTG	11	Unmodified	_SLTIHIRGHTG_					0	0	0		nc|ENSG00000196437|Q5MCW4-2|ZNF569;ENSG00000196437|ENST00000316950|ZNF569	nc|ENSG00000196437|Q5MCW4-2|ZNF569	nc|ENSG00000196437|Q5MCW4-2|ZNF569	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.3325805664062	2	596.333279	1190.652	2.6389	0.0015737	-3.4063	-0.0020313	-0.76734	-0.00045759	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.62614	3	10344	10309;10344;10435		41.427	12.257	1	1305600			54783	8054	36551	36566	62066;62067;62068	62067					0.06430426377460208
SLTIHIRGHTG	11	Unmodified	_SLTIHIRGHTG_					0	0	0		nc|ENSG00000196437|Q5MCW4-2|ZNF569;ENSG00000196437|ENST00000316950|ZNF569	nc|ENSG00000196437|Q5MCW4-2|ZNF569	nc|ENSG00000196437|Q5MCW4-2|ZNF569	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3324584960938	2	596.333279	1190.652	-0.50602	-0.00030176	-0.30093	-0.00017945	-0.80695	-0.00048121	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.638	2	10199	10199;10272		40.058	9.7405	1	1259900			54784	8054	36551	36566	62069;62070	62069					0.06430426377460208
SLTIHIRGHTG	11	Unmodified	_SLTIHIRGHTG_					0	0	0		nc|ENSG00000196437|Q5MCW4-2|ZNF569;ENSG00000196437|ENST00000316950|ZNF569	nc|ENSG00000196437|Q5MCW4-2|ZNF569	nc|ENSG00000196437|Q5MCW4-2|ZNF569	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.3324584960938	2	596.333279	1190.652	-1.3013	-0.00077598	0.61641	0.00036758	-0.68485	-0.0004084	596.3335316328556	96.129	3.5172	96.331	95.353	98.87	0.20242					227	81	4	0	0	0	0.68532	1	9942	9942		33.922	4.7516	1	1353000			54785	8054	36551	36566	62071	62071					0.06430426377460208
SLTIYCATVL	10	Unmodified	_SLTIYCATVL_					0	0	0		ENST00000535924.6_1_1:85787008-85787086:-|nuORF	ENST00000535924.6_1_1:85787008-85787086:-|nuORF	ENST00000535924.6_1_1:85787008-85787086:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.2272338867188	2	542.291368	1082.56818	0.0040357	2.1885E-06	-2.9998	-0.0016267	-2.9957	-0.0016246	542.2895406426377	55.58	0.49753	56.148	55.824	56.322	0.56836					18	11	2	0	0	0	0.37624	1	5746	5746		14.137	0	1	413220			54786	13433	36552	36567	62072	62072					0.030201341655356373
SLTKNRIPLPI	11	Unmodified	_SLTKNRIPLPI_					0	0	0			REV__ENSG00000102805|ENST00000377453|CLN5	REV__ENSG00000102805|ENST00000377453|CLN5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3921508789062	2	626.392805	1250.77106	2.3084	0.0014459	4.3102	0.0026999	6.6186	0.0041458	626.3953217408156	109.92	1.4097	109.98	109.55	110.95	0.06794					99	57	2	0	0	0	0.7342	2	13368	13303;13368		25.574	0.89325	1	615360	+		54787	17360	36553	36568	62073;62074	62074					0.15570200282331825
SLTKNRIPLPI	11	Unmodified	_SLTKNRIPLPI_					0	0	0			REV__ENSG00000102805|ENST00000377453|CLN5	REV__ENSG00000102805|ENST00000377453|CLN5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3905639648438	2	626.392805	1250.77106	6.325	0.0039619	-0.13149	-8.2365E-05	6.1935	0.0038796	626.3925398868604	109.87	0.514	109.94	109.72	110.23	0.068001					34	23	3	0	0	0	0.69995	1	13362	13362		31.53	1.2121	1	960900	+		54788	17360	36553	36568	62075	62075					0.15570200282331825
SLTKPHSTGPG	11	Unmodified	_SLTKPHSTGPG_					0	0	0		ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.2857055664062	2	541.285463	1080.55637	0.81811	0.00044283	-1.0214	-0.00055284	-0.20325	-0.00011001	541.2847834834622	20.168	0.8377	20.239	19.945	20.783	0.071129					65	34	3	0	0	0	0.48529	2	461	461;467		52.937	3.4952	1	219780			54789	7259	36554	36569	62076;62077	62076					0.019316534665676954
SLTKPHSTGPG	11	Unmodified	_SLTKPHSTGPG_					0	0	0		ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.285400390625	2	541.285463	1080.55637	0.95607	0.00051751	-1.076	-0.00058242	-0.11992	-6.4911E-05	541.2847282396424	20.535	0.58039	20.465	20.183	20.763	-0.070011					63	26	3	0	0	0	0.45916	1	524	524		54.776	1.8396	1	207610			54790	7259	36554	36569	62078	62078					0.019316534665676954
SLTKPHSTGPG	11	Unmodified	_SLTKPHSTGPG_					0	0	0		ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	541.2855834960938	2	541.285463	1080.55637	-0.03411	-1.8463E-05	-0.10994	-5.9509E-05	-0.14405	-7.7972E-05	541.2852539675774	20.45	0.7453	20.494	20.171	20.916	0.043749					88	36	3	0	0	0	0.241	3	489	477;489;495		77.318	8.5308	1	513130			54791	7259	36554	36569	62079;62080;62081	62080					0.019316534665676954
SLTKPHSTGPG	11	Unmodified	_SLTKPHSTGPG_					0	0	0		ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	541.28515625	2	541.285463	1080.55637	0.12175	6.5901E-05	-0.16321	-8.8345E-05	-0.041464	-2.2444E-05	541.2853268986822	20.124	0.77876	20.2	19.898	20.676	0.075848					97	39	4	0	0	0	0.53361	1	470	470		49.536	5.1589	1	586580			54792	7259	36554	36569	62082	62082					0.019316534665676954
SLTKPHSTGPG	11	Unmodified	_SLTKPHSTGPG_					0	0	0		ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.2863159179688	2	541.285463	1080.55637	0.90507	0.0004899	-0.97301	-0.00052668	-0.06794	-3.6775E-05	541.2848148372841	20.292	0.81443	20.271	20.029	20.843	-0.020922					88	41	3	0	0	0	0.45916	1	477	477		54.776	8.8041	1	521470			54793	7259	36554	36569	62083	62083					0.019316534665676954
SLTKPHSTGPG	11	Unmodified	_SLTKPHSTGPG_					0	0	0		ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	ENSG00000179270|ENST00000331664|PCARE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.2869873046875	2	541.285463	1080.55637	0.28155	0.0001524	-0.40274	-0.000218	-0.12119	-6.5597E-05	541.2850882224766	21.553	0.80586	21.11	20.734	21.54	-0.44324					49	18	3	0	0	0	0.60058	3	800	779;800;813		44.377	1.5129	1	332750			54794	7259	36554	36569	62084;62085;62086	62085					0.019316534665676954
SLTKTNLV	8	Unmodified	_SLTKTNLV_					0	0	0		nc|ENSG00000180113|O60522-2|TDRD6;ENSG00000180113|ENST00000316081|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	nc|ENSG00000180113|O60522-2|TDRD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.263427734375	2	438.263468	874.512382	0.27759	0.00012166	-1.0434	-0.00045727	-0.76577	-0.00033561	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.87922	1	2629	2629		31.955	2.8053	1	85249000			54795	7314	36555	36570	62087	62087					0.07010669040221273
SLTLFIGG	8	Unmodified	_SLTLFIGG_					0	0	0			REV__nc|ENSG00000149532|Q8N684-3|CPSF7	REV__nc|ENSG00000149532|Q8N684-3|CPSF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2328796386719	2	404.234179	806.453805	-1.8251	-0.00073778	-1.1309	-0.00045714	-2.956	-0.0011949	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.81548	1	8279	8279		20.482	1.1219	1	3315300	+		54796	29927	36556	36571	62088	62088					0.04283612465758324
SLTLKRLSGG	10	Unmodified	_SLTLKRLSGG_					0	0	0			REV__nc|ENSG00000179873|P59045-3|NLRP11	REV__nc|ENSG00000179873|P59045-3|NLRP11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.314023	1030.61349	-0.68072	-0.00035146	0.32195	0.00016623	-0.35876	-0.00018524	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.86272	1	10301	10301		24.519	0.31644	1	39641000	+		54797	22361	36557	36572	62089	62089					0.0994112074295117
SLTLLCFMEL	10	Unmodified	_SLTLLCFMEL_					0	0	0			REV__ENST00000519690.1_1_5:149827146-149827347:-|nuORF	REV__ENST00000519690.1_1_5:149827146-149827347:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	584.8715209960938	2	585.300878	1168.5872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.87	1	68.87	68.37	69.37	0								0	0	0	0.45132	1	6126	6126		26.693	3.1702	1		+		54798	28085	36558	36573	62090	62090					0.009653474649439886
SLTLQPLE	8	Unmodified	_SLTLQPLE_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7547912597656	2	450.755475	899.496398	0.64847	0.0002923	-3.528	-0.0015903	-2.8795	-0.001298	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.87064	1	7887	7887		29.15	0	1	162850	+		54799	21204	36559	36574	62091	62091					0.042629628033296285
SLTLRTPGTN	10	Unmodified	_SLTLRTPGTN_					0	0	0			REV__ENST00000347635.8_1_22:45582193-45582298:+|nuORF	REV__ENST00000347635.8_1_22:45582193-45582298:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2921142578125	2	530.293288	1058.57202	-1.5163	-0.00080409	1.7205	0.00091237	0.2042	0.00010828	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.60985	1	9216	9216		49.536	11.725	1	1686700	+		54800	25324	36560	36575	62092	62092					0.045079399836367884
SLTLSIAGIFK	11	Unmodified	_SLTLSIAGIFK_					0	0	0		ENST00000493599.1_1_20:44979343-44980935:-|nuORF;ENST00000480329.5_1_20:44979343-44983832:-|nuORF;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2	ENST00000493599.1_1_20:44979343-44980935:-|nuORF	ENST00000493599.1_1_20:44979343-44980935:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.3451538085938	2	575.347532	1148.68051	0.85707	0.00049311	-4.0816	-0.0023483	-3.2245	-0.0018552	575.345131550994	98.458	2.855	98.614	97.622	100.48	0.15659					162	65	5	0	0	0	0.68532	1	10257	10257		33.922	8.4715	1	2526400			54801	1435	36561	36576	62093	62093					0.11211731234061517
SLTPAPPAL	9	Unmodified	_SLTPAPPAL_					0	0	0		ENSG00000187942|ENST00000344642|LDLRAD2	ENSG00000187942|ENST00000344642|LDLRAD2	ENSG00000187942|ENST00000344642|LDLRAD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.7530212402344	2	433.752736	865.490919	0.16558	7.1822E-05	0.12045	5.2244E-05	0.28603	0.00012407	433.75263120517457	61.559	3.4925	62.113	61.36	64.852	0.55386					226	86	4	0	0	0	0.14115	1	6522	6522		85.359	5.9085	1	1110200			54802	7893	36562	36577	62094	62094					0.05279284011510299
SLTQRSSGL	9	Unmodified	_SLTQRSSGL_					0	0	0		ENSG00000113384|ENST00000265070|GOLPH3	ENSG00000113384|ENST00000265070|GOLPH3	ENSG00000113384|ENST00000265070|GOLPH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.75701904296875	2	474.759081	947.503609	-0.26755	-0.00012702	-3.4874	-0.0016557	-3.7549	-0.0017827	474.7572062163695	96.066	1.0332	96.471	96.012	97.045	0.40452					60	24	3	0	0	0	0.12652	1	11554	11554		87.754	4.4671	1	979400			54803	2720	36563	36578	62095	62095					0.027756954037613468
SLTRARRTLLV	11	Unmodified	_SLTRARRTLLV_					0	0	0			REV__ENST00000498192.5_1_1:145588480-145589073:-|nuORF	REV__ENST00000498192.5_1_1:145588480-145589073:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4075317382812	2	643.406778	1284.799	0.94326	0.0006069	-1.4069	-0.0009052	-0.46364	-0.00029831	643.4057417471539	106.19	1.8486	106.29	106.11	107.96	0.099007					180	44	5	0	0	0	0.73893	1	11478	11478		24.519	0	1	16037000	+		54804	22847	36564	36579	62096	62096					0.16799523262420735
SLTTKLNV	8	Unmodified	_SLTTKLNV_					0	0	0		ENSG00000204611|ENST00000600228|ZNF616	ENSG00000204611|ENST00000600228|ZNF616	ENSG00000204611|ENST00000600228|ZNF616	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2625427246094	2	438.263468	874.512382	-1.8646	-0.00081717	1.0768	0.00047194	-0.78773	-0.00034523	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.89494	1	3070	3070		37.159	7.3176	1	3384400			54805	8466	36565	36580	62097	62097					0.07010669040232642
SLTTKLNV	8	Unmodified	_SLTTKLNV_					0	0	0		ENSG00000204611|ENST00000600228|ZNF616	ENSG00000204611|ENST00000600228|ZNF616	ENSG00000204611|ENST00000600228|ZNF616	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2623291015625	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.90465	1	2623	2623		40.573	3.4135	1	22924000			54806	8466	36565	36580	62098	62098					0.07010669040232642
SLTTKLNV	8	Unmodified	_SLTTKLNV_					0	0	0		ENSG00000204611|ENST00000600228|ZNF616	ENSG00000204611|ENST00000600228|ZNF616	ENSG00000204611|ENST00000600228|ZNF616	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2629699707031	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.88185	1	2528	2528		32.812	2.3088	1	21381000			54807	8466	36565	36580	62099	62099					0.07010669040232642
SLTWFRCHGV	10	Unmodified	_SLTWFRCHGV_					0	0	0		ENST00000486209.5_1_22:21832732-21838406:-|nuORF	ENST00000486209.5_1_22:21832732-21838406:-|nuORF	ENST00000486209.5_1_22:21832732-21838406:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	603.29736328125	2	603.29785	1204.58115	0.17232	0.00010396	4.0716	0.0024564	4.2439	0.0025604	603.3000637787975	31.959	0.80886	31.908	31.472	32.281	-0.051033					26	17	3	0	0	0	0.85981	1	1853	1853		35.152	4.8343	1	55635			54808	12577	36566	36581	62100	62100					-0.012959899317138479
SLVALLVAFV	10	Unmodified	_SLVALLVAFV_					0	0	0		nc|ENSG00000263715|P34998-3|CRHR1;nc|ENSG00000263715|P34998-4|CRHR1;ENSG00000120088|ENST00000314537|CRHR1;nc|ENSG00000263715|P34998-1|CRHR1;ENST00000582766.5_1_17:43884387-43907895:+|nuORF	nc|ENSG00000263715|P34998-3|CRHR1;ENST00000582766.5_1_17:43884387-43907895:+|nuORF	ENST00000582766.5_1_17:43884387-43907895:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.313720703125	2	516.328611	1030.64267	2.7644	0.0014273	0.94738	0.00048916	3.7118	0.0019165	516.3291638586431	99.394	0.99939	99.34	98.78	99.779	-0.053741					48	23	3	0	0	0	0.37624	1	10683	10683		37.159	6.6555	1	361040			54809	14116;3114	36567	36582	62101	62101					0.12857265039201593
SLVALNTLCV	10	Unmodified	_SLVALNTLCV_					0	0	0		nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;ENSG00000141837|ENST00000360228|CACNA1A	nc|ENSG00000141837|O00555-5|CACNA1A	nc|ENSG00000141837|O00555-5|CACNA1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7933349609375	2	516.791535	1031.56852	1.5571	0.00080467	2.1758	0.0011244	3.7328	0.0019291	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.86348	1	9296	9296		31.53	2.3803	1	834930			54810	4530	36568	36583	62102	62102					0.05399553885399655
SLVAPTRR	8	Unmodified	_SLVAPTRR_					0	0	0			REV__ENST00000491293.1_1_1:228289992-228290982:-|nuORF	REV__ENST00000491293.1_1_1:228289992-228290982:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2745056152344	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.86677	1	9845	9845		27.882	0	1	51698000	+		54811	27654	36569	36584	62103	62103					0.08152313228504227
SLVARWLL	8	Unmodified	_SLVARWLL_					0	0	0		ENSG00000178623|ENST00000407714|GPR35;nc|ENSG00000178623|Q9HC97-2|GPR35	ENSG00000178623|ENST00000407714|GPR35	ENSG00000178623|ENST00000407714|GPR35	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2774353027344	2	479.297645	956.580737	-0.8199	-0.00039298	4.2838	0.0020532	3.4639	0.0016602	479.29965559156017	83.959	0.17444	84.018	83.936	84.111	0.059258					5	3	2	0	0	0	0.4196	1	8471	8471		17.365	0	1	18836			54812	7215	36570	36585	62104	62104					0.10070958410744879
SLVAVSKY	8	Unmodified	_SLVAVSKY_					0	0	0		ENST00000515784.1_1_5:110428046-110430680:+|nuORF	ENST00000515784.1_1_5:110428046-110430680:+|nuORF	ENST00000515784.1_1_5:110428046-110430680:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.75299072265625	2	433.752736	865.490919	-0.89842	-0.00038969	1.1465	0.00049731	0.2481	0.00010762	433.7530751140989	61.556	3.4273	61.944	61.394	64.821	0.38845					196	83	3	0	0	0	0.37266	4	6573	6529;6539;6573;6634		97.473	5.196	1	960390			54813	13091	36571	36586	62105;62106;62107;62108	62107					0.05279284011521668
SLVAVVYLSR	10	Unmodified	_SLVAVVYLSR_					0	0	0		ENSG00000184956|ENST00000421673|MUC6	ENSG00000184956|ENST00000421673|MUC6	ENSG00000184956|ENST00000421673|MUC6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8297119140625	2	553.832049	1105.64954	0.37109	0.00020552	-3.8764	-0.0021469	-3.5053	-0.0019414	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.8545	1	10433	10433		36.447	7.2767	1	1786500			54814	7658	36572	36587	62109	62109					0.10094577919790026
SLVAVYSI	8	Unmodified	_SLVAVYSI_					0	0	0			REV__ENST00000482392.1_1_2:232070951-232079819:+|nuORF	REV__ENST00000482392.1_1_2:232070951-232079819:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2460021972656	2	426.247286	850.48002	-0.1821	-7.7619E-05	-2.626	-0.0011193	-2.8081	-0.0011969	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.884	1	8920	8920		33.516	0	1	3805200	+		54815	27465	36573	36588	62110	62110					0.04879881637236849
SLVAVYSI	8	Unmodified	_SLVAVYSI_					0	0	0			REV__ENST00000482392.1_1_2:232070951-232079819:+|nuORF	REV__ENST00000482392.1_1_2:232070951-232079819:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.2459411621094	2	426.247286	850.48002	-1.7038	-0.00072625	-1.2223	-0.00052102	-2.9262	-0.0012473	426.246697883185	87.448	3.9173	87.649	85.72	89.637	0.20114					165	92	2	0	0	0	0.84341	1	8621	8621		24.203	2.5004	1	4015800	+		54816	27465	36573	36588	62111	62111					0.04879881637236849
SLVDFSTNNQ	10	Unmodified	_SLVDFSTNNQ_					0	0	0		ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A;ENST00000573175.1_1_17:4451225-4453465:-|nuORF	ENSG00000132382|ENST00000254718|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.7640380859375	2	562.76456	1123.51457	0.48175	0.00027111	-0.11461	-6.4496E-05	0.36715	0.00020662	562.7641549235042	30.437	0.43795	30.441	30.229	30.667	0.0037212					25	9	3	0	0	0	0.4892	1	2009	2009		56.721	1.9447	1	337720			54817	3789	36574	36589	62112	62112					-0.04224947012630764
SLVEAVLIS	9	Unmodified	_SLVEAVLIS_					0	0	0		nc|ENSG00000102001|O60840-4|CACNA1F;nc|ENSG00000102001|O60840-6|CACNA1F;ENSG00000102001|ENST00000323022|CACNA1F;nc|ENSG00000102001|O60840|CACNA1F;nc|ENSG00000157388|Q01668-3|CACNA1D;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000157388|Q01668-2|CACNA1D;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C	nc|ENSG00000102001|O60840-4|CACNA1F;nc|ENSG00000157388|Q01668-3|CACNA1D;nc|ENSG00000151067|Q13936-17|CACNA1C	nc|ENSG00000157388|Q01668-3|CACNA1D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774353027344	2	465.778951	929.543348	-0.25577	-0.00011913	-2.7145	-0.0012643	-2.9702	-0.0013835	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.74721	1	7885	7885		37.159	3.6435	1	451640			54818	5426;1980;5092	36575	36590	62113	62113					0.07575822354476713
SLVGLVQNSGA	11	Unmodified	_SLVGLVQNSGA_					0	0	0			REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31	REV__nc|ENSG00000156787|Q96DN5-3|TBC1D31	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.7896728515625	2	522.787838	1043.56112	-0.63317	-0.00033102	-0.86227	-0.00045078	-1.4954	-0.0007818	522.7862723097608	45.253	1.2158	46.149	45.351	46.567	0.89542					56	29	3	0	0	0	0.31387	2	4214	4201;4214		72.879	5.3856	1	2076300	+		54819	20506	36576	36591	62114;62115	62115					0.04108537609340601
SLVGQTSPK	9	Unmodified	_SLVGQTSPK_					0	0	0		ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.75830078125	2	458.758549	915.502546	-1.3238	-0.00060732	1.9426	0.00089121	0.61882	0.00028389	458.7591125380311	28.706	1.1347	28.677	28.251	29.386	-0.029207					48	26	4	0	0	0	0.3164	1	1762	1762		63.534	4.7519	1	426660			54820	1023	36577	36592	62116	62116					0.041414810348555875
SLVGQTSPK	9	Unmodified	_SLVGQTSPK_					0	0	0		ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.260498046875	2	458.758549	915.502546	0.64958	0.000298	-0.6151	-0.00028218	0.03447	1.5814E-05	458.75808970868314	28.836	1.0267	28.663	28.294	29.32	-0.17336					44	24	4	0	0	0	0.096326	1	1779	1779		93.143	26.714	1	328910			54821	1023	36577	36592	62117	62117					0.041414810348555875
SLVKDAIKVF	10	Unmodified	_SLVKDAIKVF_					0	0	0			REV__nc|ENSG00000137474|Q13402-5|MYO7A	REV__nc|ENSG00000137474|Q13402-5|MYO7A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3401489257812	2	560.342249	1118.66995	-0.40072	-0.00022454	-2.6173	-0.0014666	-3.018	-0.0016911	560.340696960339	107.82	1.1221	107.82	106.75	107.87	0					48	26	2	0	0	0	0.85834	1	11189	11189		22.58	2.5829	1	6321700	+		54822	19385	36578	36593	62118	62118					0.11535748579581195
SLVKKLEAM	9	Unmodified	_SLVKKLEAM_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.803466796875	2	509.801903	1017.58925	-0.054506	-2.7787E-05	3.6278	0.0018495	3.5733	0.0018217	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.77244	1	8352	8352		32.812	2.9709	1	828920	+		54823	23578	36579	36594	62119	62119					0.08116144265056846
SLVKKLEAM	9	Unmodified	_SLVKKLEAM_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8035888671875	2	509.801903	1017.58925	1.253	0.0006388	2.312	0.0011787	3.5651	0.0018175	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.69624	1	9070	9070		40.778	1.972	1	3243500	+		54824	23578	36579	36594	62120	62120					0.08116144265056846
SLVKKLEAM	9	Unmodified	_SLVKKLEAM_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.80340576171875	2	509.801903	1017.58925	-0.38177	-0.00019462	3.8836	0.0019799	3.5019	0.0017853	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.6204	1	8196	8196		45.972	15.655	1	948010	+		54825	23578	36579	36594	62121	62121					0.08116144265056846
SLVKKLEAM	9	Unmodified	_SLVKKLEAM_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8035583496094	2	509.801903	1017.58925	-0.37726	-0.00019233	3.8775	0.0019768	3.5002	0.0017844	509.8038009848621	86.425	4.3465	86.619	85.153	89.499	0.19379					359	102	5	0	0	0	0.75725	1	8328	8328		36.447	3.6343	1	3415500	+		54826	23578	36579	36594	62122	62122					0.08116144265056846
SLVKKLEAM	9	Unmodified	_SLVKKLEAM_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8036193847656	2	509.801903	1017.58925	0.66528	0.00033916	2.8054	0.0014302	3.4706	0.0017693	509.80330176373235	84.326	2.5006	84.474	83.057	85.557	0.14794					163	57	4	0	0	0	0.55097	6	8229	8111;8169;8217;8229;8241;8253		49.442	12.282	1	928020	+		54827	23578	36579	36594	62123;62124;62125;62126;62127;62128	62126					0.08116144265056846
SLVKKLEAM	9	Unmodified	_SLVKKLEAM_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.80340576171875	2	509.801903	1017.58925	0.68681	0.00035014	2.8448	0.0014503	3.5316	0.0018004	509.80326235241614	86.403	4.313	86.552	84.994	89.307	0.14902					345	101	5	0	0	0	0.7932	1	8659	8659		23.523	1.8204	1	3017600	+		54828	23578	36579	36594	62129	62129					0.08116144265056846
SLVKKLEAM	9	Unmodified	_SLVKKLEAM_					0	0	0			REV__ENSG00000205832|ENST00000444310|C16orf96	REV__ENSG00000205832|ENST00000444310|C16orf96	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8037109375	2	509.801903	1017.58925	-0.073627	-3.7535E-05	3.6181	0.0018445	3.5444	0.001807	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.77244	2	10313	10313;10337		32.812	2.9709	1	3087300	+		54829	23578	36579	36594	62130;62131	62130					0.08116144265056846
SLVKRRFATAA	11	Unmodified	_SLVKRRFATAA_					0	0	0		nc|ENSG00000130475|O14526-2|FCHO1;chr19:17787846-17788270|61|19.98|0.52|5.27|+|ENST00000594202|FCHO1,FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	nc|ENSG00000130475|O14526-2|FCHO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	407.5791931152344	3	407.247173	1218.71969	0.45926	0.00018703	-2.3511	-0.00095746	-1.8918	-0.00077043	407.24619376091545	16.006	0.28492	15.982	15.827	16.111	-0.024034					19	11	2	0	0	0	0.74022	1	99	99		24.232	2.4514	1	56033			54830	267	36580	36595	62132	62132					0.11907876308282539
SLVLDVELL	9	Unmodified	_SLVLDVELL_					0	0	0		ENST00000435805.6_1_10:43047060-43047381:-|nuORF	ENST00000435805.6_1_10:43047060-43047381:-|nuORF	ENST00000435805.6_1_10:43047060-43047381:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.7994079589844	2	500.799883	999.585213	-0.83514	-0.00041824	-3.9839	-0.0019951	-4.819	-0.0024134	500.7979469988337	94.638	1.5103	94.638	94.104	95.614	0					48	35	2	0	0	0	0.74721	1	9350	9350		37.159	3.6435	1	183430			54831	11715	36581	36596	62133	62133					0.08540378042994234
SLVLRKGGGG	10	Unmodified	_SLVLRKGGGG_					0	0	0		ENSG00000131055|ENST00000376075|COX4I2	ENSG00000131055|ENST00000376075|COX4I2	ENSG00000131055|ENST00000376075|COX4I2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2869873046875	2	472.287808	942.561064	-0.10777	-5.0899E-05	0.78283	0.00036972	0.67506	0.00031882	472.28822632697705	99.434	2.1055	99.484	98.705	100.81	0.049828					105	48	3	0	0	0	0.86272	1	10536	10536		24.519	1.4767	1	555450			54832	3713	36582	36597	62134	62134					0.08748582400005489
SLVLTSPGGG	10	Unmodified	_SLVLTSPGGG_					0	0	0		ENSG00000204406|ENST00000642680|MBD5;nc|ENSG00000204406|Q9P267|MBD5;nc|ENSG00000204406|Q9P267-2|MBD5	ENSG00000204406|ENST00000642680|MBD5	ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	444.2456359863281	2	444.245275	886.475997	-1.7944	-0.00079716	2.4102	0.0010707	0.61582	0.00027358	444.24618846996606	107.22	1.5901	107.26	106.2	107.79	0.036125					85	37	4	0	0	0	0.85934	1	11440	11440		35.618	5.1146	1	2474000			54833	8441	36583	36598	62135	62135					0.028217921435384596
SLVPDASVL	9	Unmodified	_SLVPDASVL_					0	0	0		nc|ENSG00000133863|Q9BXT5|TEX15;ENSG00000133863|ENST00000643185|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.7545166015625	2	450.755475	899.496398	-1.2719	-0.00057332	-1.654	-0.00074556	-2.9259	-0.0013189	450.7546758979468	81.682	3.9504	81.682	80.4	84.351	0					234	110	3	0	0	0	0.78536	1	7450	7450		29.15	0	1	177450			54834	3897	36584	36599	62136	62136					0.0426296280331826
SLVPGSVHCLR	11	Unmodified	_SLVPGSVHCLR_					0	0	0			REV__ENST00000542710.3_1_11:73882466-73916947:+|nuORF	REV__ENST00000542710.3_1_11:73882466-73916947:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.3020629882812	2	584.318783	1166.62301	-0.73363	-0.00042867	-0.036714	-2.1453E-05	-0.77034	-0.00045013	584.3185870181679	51.035	0.57916	51.47	51.285	51.864	0.43505					21	13	2	0	0	0	0.17551	1	5025	5025		37.812	3.639	1	197200	+		54835	28502	36585	36600	62137	62137					0.04636565756800337
SLVPLVLCVE	10	Unmodified	_SLVPLVLCVE_					0	0	0			REV__ENST00000325042.2_1_7:22765745-22766153:-|nuORF	REV__ENST00000325042.2_1_7:22765745-22766153:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2534790039062	2	536.309561	1070.60457	-0.42603	-0.00022848	-4.2252	-0.002266	-4.6512	-0.0024945	536.3077780187446	79.061	0.76509	79.611	79.234	79.999	0.54945					41	17	3	0	0	0	0.37624	1	9121	9121		19.997	0	1	194670	+		54836	25053	36586	36601	62138	62138					0.07209011062218451
SLVPTLALL	9	Unmodified	_SLVPTLALL_					0	0	0		ENSG00000165282|ENST00000378617|PIGO;ENST00000474436.1_1_9:35092969-35093197:-|nuORF;nc|ENSG00000165282|Q8TEQ8-2|PIGO	ENSG00000165282|ENST00000378617|PIGO	ENSG00000165282|ENST00000378617|PIGO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.3011474609375	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.7932	1	3625	3625		24.203	4.8428	1	269820			54837	6067	36587	36602	62139	62139					0.11905003113804469
SLVRSLAKAS	10	Unmodified	_SLVRSLAKAS_					0	0	0		ENST00000368331.5_1_1:155719648-155719831:-|nuORF	ENST00000368331.5_1_1:155719648-155719831:-|nuORF	ENST00000368331.5_1_1:155719648-155719831:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3143920898438	2	516.314023	1030.61349	1.9037	0.0009829	-1.9331	-0.0009981	-0.029436	-1.5198E-05	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.86587	1	12103	12103		29.17	1.0886	1	22616000			54838	10590	36588	36603	62140	62140					0.09941120742928433
SLVSKTAK	8	Unmodified	_SLVSKTAK_					0	0	0			REV__ENSG00000197724|ENST00000359246|PHF2	REV__ENSG00000197724|ENST00000359246|PHF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.25836181640625	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.83646	1	926	926		12.207	0	1	1763000	+		54839	23264	36589	36604	62141	62141					0.07886686385802477
SLVTVVAAL	9	Unmodified	_SLVTVVAAL_					0	0	0			REV__ENSG00000114650|ENST00000265565|SCAP	REV__ENSG00000114650|ENST00000265565|SCAP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7748718261719	2	436.776211	871.537869	-1.136	-0.00049617	-1.8731	-0.00081814	-3.0091	-0.0013143	436.7753128866298	91.088	2.504	91.088	90.477	92.981	0					182	58	5	0	0	0	0.7932	1	8972	8972		26.796	0	1	8774400	+		54840	18058	36590	36605	62142	62142					0.0969614356264401
SLVVIDLIGDE	11	Unmodified	_SLVVIDLIGDE_					0	0	0			REV__ENSG00000129636|ENST00000320640|ITFG1	REV__ENSG00000129636|ENST00000320640|ITFG1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	586.82373046875	2	586.824086	1171.63362	-0.26066	-0.00015296	-0.23691	-0.00013902	-0.49757	-0.00029198	586.8238105998267	110.35	1.3355	110.35	110.09	111.43	0					132	40	5	0	0	0	0.58425	1	11476	11476		45.972	1.5951	1	4860400	+		54841	18827	36591	36606	62143	62143					0.05466826892256904
SLVVIDLIGDE	11	Unmodified	_SLVVIDLIGDE_					0	0	0			REV__ENSG00000129636|ENST00000320640|ITFG1	REV__ENSG00000129636|ENST00000320640|ITFG1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	586.824086	1171.63362	3.286	0.0019283	-3.9572	-0.0023222	-0.67124	-0.0003939	586.8216293671125	110.39	1.5907	110.37	110.09	111.68	-0.027641	0.14349	-0.0031328	NaN	45.972	140	51	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6942100	+		54842	18827	36591	36606							0.05466826892256904
SLVVIDLIGDE	11	Unmodified	_SLVVIDLIGDE_					0	0	0			REV__ENSG00000129636|ENST00000320640|ITFG1	REV__ENSG00000129636|ENST00000320640|ITFG1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	586.824086	1171.63362	-0.35782	-0.00020998	-0.28304	-0.0001661	-0.64086	-0.00037607	586.8237768221713	110.28	1.7008	110.31	110.06	111.76	0.031738	0.089528	0.0011794	NaN	45.972	152	59	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6766000	+		54843	18827	36591	36606							0.05466826892256904
SLVVIDLIGDE	11	Unmodified	_SLVVIDLIGDE_					0	0	0			REV__ENSG00000129636|ENST00000320640|ITFG1	REV__ENSG00000129636|ENST00000320640|ITFG1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	586.824086	1171.63362	0.78756	0.00046216	-0.86017	-0.00050477	-0.072611	-4.261E-05	586.8234697400546	110.07	1.5893	110.19	110.01	111.6	0.12024	-0.037473	0.00050206	NaN	45.972	137	58	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6218400	+		54844	18827	36591	36606							0.05466826892256904
SLVVIDLIGDE	11	Unmodified	_SLVVIDLIGDE_					0	0	0			REV__ENSG00000129636|ENST00000320640|ITFG1	REV__ENSG00000129636|ENST00000320640|ITFG1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	586.824086	1171.63362	1.4033	0.00082352	-1.571	-0.00092191	-0.16767	-9.8392E-05	586.8230290936905	109.94	1.51	110	109.81	111.32	0.055717	-0.22241	-0.00033222	NaN	45.972	88	53	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7759200	+		54845	18827	36591	36606							0.05466826892256904
SLVVIDLIGDE	11	Unmodified	_SLVVIDLIGDE_					0	0	0			REV__ENSG00000129636|ENST00000320640|ITFG1	REV__ENSG00000129636|ENST00000320640|ITFG1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	586.824086	1171.63362	5.447	0.0031964	-5.6047	-0.003289	-0.15768	-9.253E-05	586.8206802165985	109.95	1.2413	110.01	109.84	111.08	0.068001	-0.20809	-0.0050664	NaN	45.972	87	49	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5556500	+		54846	18827	36591	36606							0.05466826892256904
SLVYVQNE	8	Unmodified	_SLVYVQNE_					0	0	0			REV__ENSG00000164309|ENST00000446378|CMYA5	REV__ENSG00000164309|ENST00000446378|CMYA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.24310302734375	2	476.242732	950.470912	-1.985	-0.00094537	3.7476	0.0017848	1.7626	0.00083942	476.2448871614913	35.319	1.205	35.325	34.727	35.932	0.0063934					50	28	3	0	0	0	0.90983	1	2228	2228		42.396	0.96952	1	181550	+		54847	21067	36592	36607	62144	62144					-0.006305117191004683
SLWAKLKLQKA	11	Unmodified	_SLWAKLKLQKA_					0	0	0		ENST00000528675.1_1_11:123468749-123468878:-|nuORF;ENSG00000183431|ENST00000373019|SF3A3	ENST00000528675.1_1_11:123468749-123468878:-|nuORF	ENST00000528675.1_1_11:123468749-123468878:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.3970947265625	2	643.403173	1284.79179	1.777	0.0011433	4.2737	0.0027497	6.0507	0.0038931	643.4059831518348	106.95	1.1451	106.98	106.72	107.86	0.03688					79	26	4	0	0	0	0.73893	1	11787	11787		24.519	3.5723	1	1597700			54848	7532	36593	36608	62145	62145					0.16078790661981657
SLWAQIESN	9	Unmodified	_SLWAQIESN_					0	0	0			REV__ENST00000470800.1_1_21:30517986-30521557:+|nuORF	REV__ENST00000470800.1_1_21:30517986-30521557:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7760620117188	2	524.258914	1046.50327	-1.0235	-0.00053657	0.080728	4.2322E-05	-0.94275	-0.00049425	524.2588639125345	44.395	0.59925	45.24	44.986	45.585	0.84437					34	13	3	0	0	0	0.20789	1	4114	4114		66.429	8.1994	1	754270	+		54849	27219	36594	36609	62146	62146					-0.018117243160759244
SLWDRLIFH	9	Unmodified	_SLWDRLIFH_					0	0	0		nc|ENSG00000151726|P33121-2|ACSL1;nc|ENSG00000151726|P33121-3|ACSL1;ENSG00000151726|ENST00000281455|ACSL1	nc|ENSG00000151726|P33121-2|ACSL1	nc|ENSG00000151726|P33121-2|ACSL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	593.8217163085938	2	593.822015	1185.62948	-0.082593	-4.9046E-05	0.078183	4.6427E-05	-0.0044103	-2.6189E-06	593.8219870422669	78.725	1.2314	79.135	78.76	79.991	0.4106					70	28	4	0	0	0	0.58063	3	8999	8987;8999;9011		47.96	1.9873	1	1307300			54850	5140	36595	36610	62147;62148;62149	62148					0.04408826979852165
SLWDRLIFH	9	Unmodified	_SLWDRLIFH_					0	0	0		nc|ENSG00000151726|P33121-2|ACSL1;nc|ENSG00000151726|P33121-3|ACSL1;ENSG00000151726|ENST00000281455|ACSL1	nc|ENSG00000151726|P33121-2|ACSL1	nc|ENSG00000151726|P33121-2|ACSL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	593.8218994140625	2	593.822015	1185.62948	-0.14751	-8.7595E-05	0.27166	0.00016132	0.12415	7.3722E-05	593.8221342146043	78.596	1.6214	79.159	78.093	79.714	0.56332					83	38	4	0	0	0	0.29259	3	9019	9008;9019;9031		65.465	14.273	1	1428100			54851	5140	36595	36610	62150;62151;62152	62151					0.04408826979852165
SLWYWNALK	9	Unmodified	_SLWYWNALK_					0	0	0			REV__ENSG00000127951|ENST00000248598|FGL2	REV__ENSG00000127951|ENST00000248598|FGL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.809814453125	2	590.811116	1179.60768	-1.4475	-0.00085521	-2.175	-0.001285	-3.6225	-0.0021402	590.8098678631684	57.766	1.8735	58.16	57.738	59.612	0.39408					109	45	3	0	0	0	0.09311	1	6101	6101		94.006	17.232	1	12390000	+		54852	18755	36596	36611	62153	62153					0.02506022231273164
SLYKEGHSK	9	Unmodified	_SLYKEGHSK_					0	0	0		ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4;ENSG00000116254|ENST00000262450|CHD5	ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5	ENSG00000111642|ENST00000544040|CHD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.7740478515625	2	524.774731	1047.53491	1.0645	0.00055861	-1.0478	-0.00054987	0.01665	8.7376E-06	524.774021755657	17.357	0.35882	16.874	16.718	17.077	-0.48256					16	7	3	0	0	0	0.23176	2	244	244;258		70.816	8.7088	1	321310			54853	2592;2911	36597	36612	62154;62155	62154					0.013042684378660852
SLYKEGHSK	9	Unmodified	_SLYKEGHSK_					0	0	0		ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4;ENSG00000116254|ENST00000262450|CHD5	ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5	ENSG00000111642|ENST00000544040|CHD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.7742309570312	2	524.774731	1047.53491	0.41976	0.00022028	-0.59093	-0.00031011	-0.17117	-8.9827E-05	524.7743447386226	17.432	0.37431	16.821	16.659	17.034	-0.6107					16	8	3	0	0	0	0.0358	1	256	256		114.89	43.017	1	338640			54854	2592;2911	36597	36612	62156	62156					0.013042684378660852
SLYKKLEIKH	10	Unmodified	_SLYKKLEIKH_					0	0	0		ENSG00000115616|ENST00000233969|SLC9A2	ENSG00000115616|ENST00000233969|SLC9A2	ENSG00000115616|ENST00000233969|SLC9A2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2561950683594	3	420.255446	1257.74451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.14	1	112.12	111.62	112.62	-0.019882								0	0	0	0.45132	1	11948	11948		20.837	1.5745	1				54855	2863	36598	36613	62157	62157					0.12594511390989283
SLYLKLAQEKP	11	Unmodified	_SLYLKLAQEKP_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|10|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|10|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|10|1|sense	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.5857238769531	3	430.586972	1288.73909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.814	1	33.984	33.484	34.484	0.16971								0	0	0	0.56276	1	2463	2463		50.791	14.263	1				54856	14500	36599	36614	62158	62158					0.10626787808496374
SLYLVLPVW	9	Unmodified	_SLYLVLPVW_					0	0	0			REV__ENSG00000103089|ENST00000219368|FA2H	REV__ENSG00000103089|ENST00000219368|FA2H	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.9318237304688	2	545.320786	1088.62702	-0.0039417	-2.1495E-06	3.1078	0.0016947	3.1038	0.0016926	545.3225405029929	18.437	0.32746	17.96	17.843	18.171	-0.47694					8	6	2	0	0	0	0.20789	1	397	397		12.959	5.2689	1	52269	+		54857	17387	36600	36615	62159	62159					0.08624978522175297
SLYNISIQRCV	11	Unmodified	_SLYNISIQRCV_					0	0	0			REV__ENST00000533372.1_1_12:49976813-49999059:-|nuORF	REV__ENST00000533372.1_1_12:49976813-49999059:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3941650390625	2	648.342455	1294.67036	0.94452	0.00061237	-0.39385	-0.00025535	0.55066	0.00035702	648.3419817476437	107.43	0.29558	107.53	107.34	107.63	0.091255					10	6	2	0	0	0	0.17497	1	11513	11513		35.152	12.572	1	138310	+		54858	28343	36601	36616	62160	62160					0.03480800237139192
SLYPSGSAPAP	11	Unmodified	_SLYPSGSAPAP_					0	0	0			REV__ENSG00000164715|ENST00000297293|LMTK2	REV__ENSG00000164715|ENST00000297293|LMTK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.2583618164062	2	523.761289	1045.50803	-0.042751	-2.2391E-05	-0.43296	-0.00022677	-0.47572	-0.00024916	523.7607727774529	60.587	0.95979	60.575	60.077	61.037	-0.012203					59	22	4	0	0	0	0.7342	1	5629	5629		25.574	1.0549	1	308610	+		54859	21107	36602	36617	62161	62161					-0.012908401733284336
SLYRFTTI	8	Unmodified	_SLYRFTTI_					0	0	0		ENST00000427755.2_1_11:33037501-33047701:+|nuORF;ENST00000532078.1_1_11:33037501-33049388:+|nuORF;nc|ENSG00000121690|Q96QD5-2|DEPDC7;ENSG00000121690|ENST00000241051|DEPDC7	ENST00000427755.2_1_11:33037501-33047701:+|nuORF	ENST00000427755.2_1_11:33037501-33047701:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7322692871094	2	500.776742	999.538931	0.26582	0.00013312	-3.7031	-0.0018544	-3.4373	-0.0017213	500.7753112123999	30.66	0.305	30.664	30.448	30.753	0.0037212					10	6	2	0	0	0	0.4196	1	2045	2045		49.442	22.749	1	103360			54860	3193	36603	36618	62162	62162					0.03914357931569157
SLYVAAWGL	9	Unmodified	_SLYVAAWGL_					0	0	0			REV__ENSG00000231925|ENST00000434618|TAPBP	REV__ENSG00000231925|ENST00000434618|TAPBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.2671813964844	2	490.26601	978.517468	0.64647	0.00031694	4.0877	0.002004	4.7341	0.002321	490.26800757881944	83.964	3.3049	84.112	83.013	86.318	0.14793					138	76	2	0	0	0	0.69914	1	8206	8206		40.573	3.4135	1	246750	+		54861	23766	36604	36619	62163	62163					0.027349729028628644
SMALILFCNY	10	Carbamidomethyl (C),Oxidation (M)	_SM(Oxidation (M))ALILFC(Carbamidomethyl (C))NY_	SMALILFC(1)NY	SM(1)ALILFCNY	SMALILFC(66)NY	SM(66)ALILFCNY	0	1	1		ENSG00000176142|ENST00000319172|TMEM39A	ENSG00000176142|ENST00000319172|TMEM39A	ENSG00000176142|ENST00000319172|TMEM39A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	624.2932739257812	2	624.293585	1246.57262	1.285	0.00080223	-2.0176	-0.0012596	-0.73261	-0.00045736	624.2922374307117	69.424	0.62526	69.56	69.206	69.831	0.13521					82	28	4	0	0	0	0.37206	1	6288	6288		66.429	13.493	1	3007800			54862	7057	36605	36620	62164	62164	90	120			-0.04080724683194603
SMAPGDAMAAG	11	Unmodified	_SMAPGDAMAAG_					0	0	0		ENST00000589764.1_1_18:12067489-12068164:-|nuORF	ENST00000589764.1_1_18:12067489-12068164:-|nuORF	ENST00000589764.1_1_18:12067489-12068164:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.7087707519531	2	489.704602	977.394652	-0.010641	-5.2108E-06	2.7534	0.0013484	2.7428	0.0013432	489.7065332968669	94.543	0.77744	94.979	94.709	95.487	0.43539					36	18	3	0	0	0	0.75041	1	11319	11319		21.96	0	1	463900			54863	14245	36606	36621	62165	62165					-0.09494974882386487
SMAVMRNR	8	Unmodified	_SMAVMRNR_					0	0	0			REV__SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|36|3|sense	REV__SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|36|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.74603271484375	2	482.744396	963.47424	-0.019338	-9.3353E-06	3.1468	0.0015191	3.1275	0.0015098	482.7457535001424	31.583	0.63912	31.69	31.42	32.059	0.10707					33	14	4	0	0	0	0.89962	1	2176	2176		38.806	1.647	1	590840	+		54864	30333	36607	36622	62166	62166					-0.008958634177247404
SMCVLHWVSP	10	Unmodified	_SMCVLHWVSP_					0	0	0		ENST00000547675.5_1_12:49496683-49499710:-|nuORF	ENST00000547675.5_1_12:49496683-49499710:-|nuORF	ENST00000547675.5_1_12:49496683-49499710:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.3106079101562	2	579.775362	1157.53617	-0.82608	-0.00047894	0.86131	0.00049937	0.035228	2.0424E-05	579.7758317189329	68.964	0.30301	68.997	68.814	69.117	0.032997					14	11	2	0	0	0	0.37624	1	6592	6592		25.574	10.241	1	96869			54865	13613	36608	36623	62167	62167					-0.03629556789246635
SMDLQNEPW	9	Unmodified	_SMDLQNEPW_					0	0	0			REV__nc|ENSG00000137177|Q9H1H9-3|KIF13A	REV__nc|ENSG00000137177|Q9H1H9-3|KIF13A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.7413940429688	2	560.242406	1118.47026	-0.51849	-0.00029048	4.2045	0.0023555	3.686	0.0020651	560.2447202398796	26.751	0.61838	26.792	26.47	27.088	0.040834					32	18	2	0	0	0	0.58151	1	1177	1177		47.916	7.1374	1	72536	+		54866	19366	36609	36624	62168	62168					-0.08423674430446226
SMDPLPVFL	9	Unmodified	_SMDPLPVFL_					0	0	0		ENST00000492528.1_1_1:151380799-151380985:-|nuORF;nc|ENSG00000143442|Q7Z3K3-5|POGZ;nc|ENSG00000143442|Q7Z3K3-7|POGZ;nc|ENSG00000143442|Q7Z3K3-2|POGZ;nc|ENSG00000143442|Q7Z3K3-3|POGZ;nc|ENSG00000143442|Q7Z3K3-6|POGZ;ENSG00000143442|ENST00000271715|POGZ	ENST00000492528.1_1_1:151380799-151380985:-|nuORF	ENST00000492528.1_1_1:151380799-151380985:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.7680358886719	2	509.767529	1017.5205	2.6583	0.0013551	-2.4254	-0.0012364	0.23284	0.0001187	509.7660850240145	99.96	0.87286	100.31	99.951	100.82	0.35328					48	21	3	0	0	0	0.5393	1	12118	12118		50.025	12.996	1	463500			54867	4631	36610	36625	62169	62169					0.012444799653621885
SMDPLPVFL	9	Unmodified	_SMDPLPVFL_					0	0	0		ENST00000492528.1_1_1:151380799-151380985:-|nuORF;nc|ENSG00000143442|Q7Z3K3-5|POGZ;nc|ENSG00000143442|Q7Z3K3-7|POGZ;nc|ENSG00000143442|Q7Z3K3-2|POGZ;nc|ENSG00000143442|Q7Z3K3-3|POGZ;nc|ENSG00000143442|Q7Z3K3-6|POGZ;ENSG00000143442|ENST00000271715|POGZ	ENST00000492528.1_1_1:151380799-151380985:-|nuORF	ENST00000492528.1_1_1:151380799-151380985:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	509.767529	1017.5205	0.41156	0.0002098	-1.0131	-0.00051643	-0.60152	-0.00030664	509.7667541866414	99.915	0.44275	99.963	99.764	100.21	0.047523	-0.20937	0.00090087	NaN	50.025	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38848			54868	4631	36610	36625							0.012444799653621885
SMEAQPVAMGM	11	Oxidation (M)	_SMEAQPVAMGM(Oxidation (M))_		SMEAQPVAM(0.006)GM(0.994)		SM(-55)EAQPVAM(-22)GM(22)	0	0	1			REV__ENST00000520422.5_1_8:37278943-37333386:-|nuORF	REV__ENST00000520422.5_1_8:37278943-37333386:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.2446899414062	2	584.245777	1166.477	-1.7222	-0.0010062	-1.3108	-0.00076581	-3.033	-0.001772	584.2448524221044	60.063	1.1625	60.453	60.095	61.257	0.39077					80	31	3	0	0	0	0.45916	1	6325	6325		54.776	13.35	3	4634700	+		54869	28102	36611	36626	62170	62170		418			-0.09957820865747635
SMELYRNAP	9	Oxidation (M)	_SM(Oxidation (M))ELYRNAP_		SM(1)ELYRNAP		SM(64)ELYRNAP	0	0	1		ENSG00000075399|ENST00000389386|VPS9D1;nc|ENSG00000075399|Q9Y2B5-2|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.7582397460938	2	548.758223	1095.50189	0.32792	0.00017995	-3.1752	-0.0017424	-2.8473	-0.0015625	548.7562409902832	51.637	0.64779	51.649	51.354	52.002	0.012436					33	15	3	0	0	0	0.30689	1	4474	4474		64.207	14.766	1	161610			54870	1333	36612	36627	62171	62171		22			-0.0420368167651759
SMELYRNAP	9	Oxidation (M)	_SM(Oxidation (M))ELYRNAP_					0	0	1		ENSG00000075399|ENST00000389386|VPS9D1;nc|ENSG00000075399|Q9Y2B5-2|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	548.758223	1095.50189	0.40754	0.00022364	-2.791	-0.0015316	-2.3834	-0.0013079	548.7566422822223	51.706	0.42065	51.766	51.503	51.924	0.059719	0.1139	-9.7097E-05	NaN	64.207	27	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156940			54871	1333	36612	36627				22			-0.0420368167651759
SMELYRNAP	9	Oxidation (M)	_SM(Oxidation (M))ELYRNAP_					0	0	1		ENSG00000075399|ENST00000389386|VPS9D1;nc|ENSG00000075399|Q9Y2B5-2|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	548.758223	1095.50189	-0.16766	-9.2004E-05	-2.7424	-0.0015049	-2.91	-0.0015969	548.7565862807302	51.73	0.5129	51.645	51.388	51.901	-0.084538	-0.0066007	-4.3734E-05	NaN	64.207	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119170			54872	1333	36612	36627				22			-0.0420368167651759
SMGAPFIFIK	10	Unmodified	_SMGAPFIFIK_					0	0	0		ENSG00000118600|ENST00000261234|RXYLT1	ENSG00000118600|ENST00000261234|RXYLT1	ENSG00000118600|ENST00000261234|RXYLT1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	555.8060302734375	2	555.804445	1109.59434	-1.0593	-0.00058879	4.4214	0.0024574	3.3621	0.0018686	555.8068254201057	59.586	0.60949	59.586	59.286	59.895	0					39	22	2	0	0	0	0.6116	1	5175	5175		49.442	3.4896	1	180100			54873	3040	36613	36628	62172	62172					0.04392448127669013
SMGAPFIFIK	10	Unmodified	_SMGAPFIFIK_					0	0	0		ENSG00000118600|ENST00000261234|RXYLT1	ENSG00000118600|ENST00000261234|RXYLT1	ENSG00000118600|ENST00000261234|RXYLT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.3057250976562	2	555.804445	1109.59434	-0.89307	-0.00049637	4.0624	0.0022579	3.1693	0.0017615	555.806604901083	59.553	0.91605	59.54	59.196	60.112	-0.013729					63	24	4	0	0	0	0.64457	1	5445	5445		47.657	1.6851	1	365910			54874	3040	36613	36628	62173	62173					0.04392448127669013
SMGIGLVK	8	Unmodified	_SMGIGLVK_					0	0	0		ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.20880126953125	2	402.736031	803.45751	-0.57449	-0.00023137	-4.1309	-0.0016637	-4.7054	-0.001895	402.7341932037218	85.532	0.20718	85.979	85.904	86.111	0.44736					6	4	2	0	0	0	0.4196	1	10043	10043		6.7355	0	1	28000			54875	5096	36614	36629	62174	62174					0.04791958967973642
SMIICSWF	8	Unmodified	_SMIICSWF_					0	0	0		ENST00000476966.5_1_1:156381855-156382338:-|nuORF	ENST00000476966.5_1_1:156381855-156382338:-|nuORF	ENST00000476966.5_1_1:156381855-156382338:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.7264099121094	2	493.727349	985.440145	-0.6463	-0.0003191	-0.21039	-0.00010388	-0.85669	-0.00042297	493.7270767994315	80.286	1.6566	80.702	80.296	81.952	0.41621					89	39	3	0	0	0	0.27282	3	9214	9214;9226;9240		105.27	17.514	1	1035700			54876	12348	36615	36630	62175;62176;62177	62175					-0.05315704629344964
SMIICSWF	8	Unmodified	_SMIICSWF_					0	0	0		ENST00000476966.5_1_1:156381855-156382338:-|nuORF	ENST00000476966.5_1_1:156381855-156382338:-|nuORF	ENST00000476966.5_1_1:156381855-156382338:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7261047363281	2	493.727349	985.440145	-0.19684	-9.7184E-05	-0.45826	-0.00022626	-0.6551	-0.00032344	493.7268772260669	80.155	1.7003	80.682	80.359	82.06	0.52676					85	40	4	0	0	0	0.67263	1	9230	9230		68.485	7.5128	1	1032800			54877	12348	36615	36630	62178	62178					-0.05315704629344964
SMINTTLIITN	11	Unmodified	_SMINTTLIITN_					0	0	0		ENSG00000138760|ENST00000264896|SCARB2;nc|ENSG00000138760|Q14108-2|SCARB2	ENSG00000138760|ENST00000264896|SCARB2	ENSG00000138760|ENST00000264896|SCARB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.5566711425781	3	407.556684	1219.64822	-0.034204	-1.394E-05	1.5876	0.00064705	1.5534	0.00063311	407.55716252115457	30.747	0.75216	30.819	30.494	31.246	0.072069					37	16	3	0	0	0	0.64964	1	2045	2045		38.714	7.6459	1	246790			54878	4328	36616	36631	62179	62179					0.04718575768742994
SMKKKKKKK	9	Unmodified	_SMKKKKKKK_					0	0	0			REV__chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	REV__chr12:104265889-105060827|40|1356.05|0.0|27.01|+|2|None,NOPCHAP1|2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.330078125	2	567.381186	1132.74782	0.48228	0.00027364	2.4181	0.001372	2.9004	0.0016456	567.3831540076353	91.669	0.17297	91.89	91.806	91.979	0.22157					5	3	2	0	0	0	0.20789	1	9256	9256		17.365	5.1581	1	24131	+		54879	15512	36617	36632	62180	62180					0.18675482963999457
SMKKLLGP	8	Unmodified	_SMKKLLGP_					0	0	0		ENSG00000116711|ENST00000367466|PLA2G4A;ENST00000466600.1_1_1:186823486-186908166:+|nuORF	ENSG00000116711|ENST00000367466|PLA2G4A	ENSG00000116711|ENST00000367466|PLA2G4A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2654113769531	2	437.264956	872.515359	-2.1128	-0.00092385	3.801	0.001662	1.6882	0.00073819	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.88915	1	828	828		35.201	6.9464	1	1366900			54880	2940	36618	36633	62181	62181					0.07400220893396181
SMKKLLGP	8	Unmodified	_SMKKLLGP_					0	0	0		ENSG00000116711|ENST00000367466|PLA2G4A;ENST00000466600.1_1_1:186823486-186908166:+|nuORF	ENSG00000116711|ENST00000367466|PLA2G4A	ENSG00000116711|ENST00000367466|PLA2G4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2656555175781	2	437.264956	872.515359	-0.37471	-0.00016385	2.1781	0.00095241	1.8034	0.00078857	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.91005	1	777	777		42.474	5.3154	1	970200			54881	2940	36618	36633	62182	62182					0.07400220893396181
SMKKLLGP	8	Unmodified	_SMKKLLGP_					0	0	0		ENSG00000116711|ENST00000367466|PLA2G4A;ENST00000466600.1_1_1:186823486-186908166:+|nuORF	ENSG00000116711|ENST00000367466|PLA2G4A	ENSG00000116711|ENST00000367466|PLA2G4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2657470703125	2	437.264956	872.515359	1.7902	0.0007828	0.24809	0.00010848	2.0383	0.00089128	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.86791	1	756	756		28.254	2.8041	1	738160			54882	2940	36618	36633	62183	62183					0.07400220893396181
SMKKLLGP	8	Unmodified	_SMKKLLGP_					0	0	0		ENSG00000116711|ENST00000367466|PLA2G4A;ENST00000466600.1_1_1:186823486-186908166:+|nuORF	ENSG00000116711|ENST00000367466|PLA2G4A	ENSG00000116711|ENST00000367466|PLA2G4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26611328125	2	437.264956	872.515359	0.044356	1.9395E-05	1.5469	0.00067641	1.5913	0.0006958	437.26562029129207	23.787	1.9639	23.882	23.206	25.169	0.094501					226	94	5	0	0	0	0.79929	2	819	810;819		20.482	2.6882	1	2622700			54883	2940	36618	36633	62184;62185	62185					0.07400220893396181
SMKKLLGP	8	Unmodified	_SMKKLLGP_					0	0	0		ENSG00000116711|ENST00000367466|PLA2G4A;ENST00000466600.1_1_1:186823486-186908166:+|nuORF	ENSG00000116711|ENST00000367466|PLA2G4A	ENSG00000116711|ENST00000367466|PLA2G4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2650451660156	2	437.264956	872.515359	0.6899	0.00030167	1.2034	0.00052622	1.8933	0.00082788	437.2653488785587	29.45	4.4235	29.36	28.715	33.139	-0.089546					176	102	3	0	0	0	0.88915	1	1829	1829		35.201	8.4046	1	563170			54884	2940	36618	36633	62186	62186					0.07400220893396181
SMKKTALV	8	Unmodified	_SMKKTALV_					0	0	0		ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	439.26275634765625	2	439.262413	876.510274	0.73972	0.00032493	1.7447	0.00076638	2.4844	0.0010913	439.26303385245035	111.83	0.49524	111.9	111.59	112.09	0.069542					21	14	2	0	0	0	0.86288	1	12046	12046		26.796	1.3459	1	217980			54885	3770	36619	36634	62187	62187					0.06707917030769295
SMKVHIKAL	9	Unmodified	_SMKVHIKAL_					0	0	0		ENSG00000226761|ENST00000533467|TAS2R46	ENSG00000226761|ENST00000533467|TAS2R46	ENSG00000226761|ENST00000533467|TAS2R46	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8092651367188	2	513.810062	1025.60557	-0.038079	-1.9565E-05	-1.9021	-0.00097733	-1.9402	-0.00099689	513.8090107774265	57.263	2.0786	57.251	56.87	58.948	-0.012203					104	72	2	0	0	0	0.38563	1	5212	5212		58.782	12.83	1	172740			54886	8714	36620	36635	62188	62188					0.09379270221802471
SMLLQSNALD	10	Unmodified	_SMLLQSNALD_					0	0	0			REV__ENST00000460343.5_1_3:53260493-53260973:-|nuORF	REV__ENST00000460343.5_1_3:53260493-53260973:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.2736206054688	2	546.273706	1090.53286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.156	1	30.113	29.613	30.613	-0.043095								0	0	0	0.45132	1	1624	1624		24.519	0.99649	1		+		54887	27001	36621	36636	62189	62189					-0.008785283622728457
SMLRLLGL	8	Unmodified	_SMLRLLGL_					0	0	0			REV__ENST00000589824.6_1_19:56320624-56320738:-|nuORF	REV__ENST00000589824.6_1_19:56320624-56320738:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7801513671875	2	451.778231	901.541908	0.99248	0.00044838	3.0988	0.0014	4.0913	0.0018484	451.77963856381217	86.78	1.6717	86.706	86.227	87.899	-0.074005					91	38	4	0	0	0	0.88915	1	8978	8978		35.201	0	1	335390	+		54888	29171	36622	36637	62190	62190					0.08719909784736046
SMLSVTNLV	9	Unmodified	_SMLSVTNLV_					0	0	0			REV__nc|ENSG00000172057|Q8N138-4|ORMDL3	REV__nc|ENSG00000172057|Q8N138-4|ORMDL3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	482.2263488769531	2	482.26261	962.510668	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.174	1	24.174	23.674	24.674	0								0	0	0	0.28009	1	808	808		39.253	6.4404	1		+		54889	21799	36623	36638	62191	62191					0.02791291959965747
SMNANTITK	9	Unmodified	_SMNANTITK_					0	0	0		ENSG00000175467|ENST00000312397|SART1	ENSG00000175467|ENST00000312397|SART1	ENSG00000175467|ENST00000312397|SART1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.2463684082031	2	490.247492	978.48043	-1.0992	-0.0005389	1.3018	0.00063822	0.2026	9.9327E-05	490.24800802463454	28.579	0.92085	28.486	28.142	29.063	-0.093384					47	21	3	0	0	0	0.15708	1	1763	1763		82.75	8.4954	1	1612600			54890	7018	36624	36639	62192	62192					-0.00967066705209163
SMPLTLIR	8	Unmodified	_SMPLTLIR_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-4|ADGRV1;nc|ENSG00000164199|Q8WXG9-3|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7772216796875	2	465.775688	929.536823	-0.22002	-0.00010248	4.439	0.0020676	4.2189	0.0019651	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.85277	1	9384	9384		25.45	1.2474	1	1042300			54891	5938	36625	36640	62193	62193					0.06923605922122533
SMQPATMPRT	10	Unmodified	_SMQPATMPRT_					0	0	0			REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.267333984375	2	560.267901	1118.52125	0.19689	0.00011031	-0.73825	-0.00041362	-0.54136	-0.00030331	560.2671966459062	31.882	0.47118	32.008	31.818	32.289	0.12642					17	10	2	0	0	0	0.49268	1	2194	2194		56.434	1.6575	1	252490	+		54892	19887	36626	36641	62194	62194					-0.033270486572519076
SMQPATMPRT	10	Unmodified	_SMQPATMPRT_					0	0	0			REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	REV__nc|ENSG00000144406|Q8N2C7-4|UNC80	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	560.267901	1118.52125	0.19689	0.00011031	-0.73825	-0.00041362	-0.54136	-0.00030331	560.2671966459062	31.882	0.47118	32.008	31.818	32.289	0.12642	0.015276	0.0001263	NaN	56.434	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252490	+		54893	19887	36626	36641							-0.033270486572519076
SMRIPTELL	9	Unmodified	_SMRIPTELL_					0	0	0			REV__nc|ENSG00000114098|Q8IUR7-7|ARMC8	REV__nc|ENSG00000114098|Q8IUR7-7|ARMC8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2982177734375	2	530.296985	1058.57942	-0.31514	-0.00016712	3.3569	0.0017802	3.0418	0.001613	530.298424604737	60.061	0.80579	60.452	60.055	60.86	0.39077					39	21	3	0	0	0	0.25483	1	6345	6345		68.787	1.2932	1	660720	+		54894	18029	36627	36642	62195	62195					0.052469562596797914
SMTVKVSGKWI	11	Unmodified	_SMTVKVSGKWI_					0	0	0		nc|ENSG00000183668|Q00887-2|PSG9	nc|ENSG00000183668|Q00887-2|PSG9	nc|ENSG00000183668|Q00887-2|PSG9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3457641601562	2	618.344466	1234.67438	-0.1645	-0.00010172	2.6153	0.0016171	2.4508	0.0015154	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.72739	1	9887	9887		27.047	0.3544	1	511870			54895	15144	36628	36643	62196	62196					0.06642889730869683
SMVKGKEILSN	11	Oxidation (M)	_SM(Oxidation (M))VKGKEILSN_		SM(1)VKGKEILSN		SM(58)VKGKEILSN	0	0	1			REV__ENST00000530561.5_1_11:58294796-58294838:-|nuORF	REV__ENST00000530561.5_1_11:58294796-58294838:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.331787109375	2	611.329013	1220.64347	-0.48858	-0.00029869	1.0097	0.00061724	0.52108	0.00031855	611.3295541194741	78.492	1.0319	78.544	78.268	79.3	0.051674					62	27	4	0	0	0	0.41445	1	7705	7705		58.246	12.338	1	361320	+		54896	28283	36629	36644	62197	62197		419			0.04197691625995503
SNAFTFAVVW	10	Unmodified	_SNAFTFAVVW_					0	0	0			REV__ENSG00000186188|ENST00000371481|FFAR4	REV__ENSG00000186188|ENST00000371481|FFAR4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.8734130859375	2	571.287474	1140.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.053	1	76.187	75.687	76.687	0.13325								0	0	0	0.45132	1	7102	7102		26.693	1.2427	1		+		54897	22831	36630	36645	62198	62198					-0.004262570397258969
SNAIEEEGDY	10	Unmodified	_SNAIEEEGDY_					0	0	0		ENSG00000133124|ENST00000372129|IRS4;nc|ENSG00000133124|O14654|IRS4	ENSG00000133124|ENST00000372129|IRS4	ENSG00000133124|ENST00000372129|IRS4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.7313232421875	2	563.730383	1125.44621	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.234	1	53.209	52.709	53.709	-0.024754								0	0	0	0.45132	1	4745	4745		32.812	0.85756	1				54898	3861	36631	36646	62199	62199					-0.11149236383130301
SNAIKKTFPFL	11	Unmodified	_SNAIKKTFPFL_					0	0	0		nc|ENSG00000185404|Q9H930-1|SP140L;nc|ENSG00000185404|Q9H930-2|SP140L;ENSG00000185404|ENST00000415673|SP140L;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497|SP100;ENSG00000067066|ENST00000340126|SP100	nc|ENSG00000185404|Q9H930-1|SP140L	nc|ENSG00000185404|Q9H930-1|SP140L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.58135986328125	3	422.579929	1264.71796	2.2204	0.0009383	2.6436	0.0011171	4.864	0.0020554	422.58094622121547	97.769	3.2395	97.714	96.802	100.04	-0.055542					208	75	4	0	0	0	0.72374	1	10577	10577		27.644	4.266	1	525770			54899	7710	36632	36647	62200	62200					0.0961882249964674
SNCQDNSC	8	Unmodified	_SNCQDNSC_					0	0	0		ENST00000610253.5_1_11:108042863-108061204:-|nuORF;ENSG00000149308|ENST00000278612|NPAT	ENST00000610253.5_1_11:108042863-108061204:-|nuORF	ENST00000610253.5_1_11:108042863-108061204:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.6397705078125	2	435.639459	869.264366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.823	1	67.373	66.873	67.873	0.55071								0	0	0	0.30579	1	7328	7328		16.473	1.6083	1				54900	5018	36633	36648	62201	62201					-0.17549570881385534
SNCSMHDY	8	Unmodified	_SNCSMHDY_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.6641540527344	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73	1	73.131	72.631	73.631	0.13064								0	0	0	0.29755	1	6719	6719		24.203	3.7209	1				54901	6419	36634	36649	62202	62202					-0.16304407467623605
SNCSMHDY	8	Unmodified	_SNCSMHDY_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.6647644042969	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.847	1	70.231	69.731	70.731	0.38416								0	0	0	0.30811	1	7722	7722		45.952	10.751	1				54902	6419	36634	36649	62203	62203					-0.16304407467623605
SNCSMHDY	8	Unmodified	_SNCSMHDY_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.66461181640625	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.202	1	70.587	70.087	71.087	0.38416								0	0	0	0.29631	1	7771	7771		25.45	1.2474	1				54903	6419	36634	36649	62204	62204					-0.16304407467623605
SNCSMHDY	8	Unmodified	_SNCSMHDY_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.664306640625	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.298	1	70.682	70.182	71.182	0.38416								0	0	0	0.3037	1	7785	7785		18.324	0.95945	1				54904	6419	36634	36649	62205	62205					-0.16304407467623605
SNCSMHDY	8	Unmodified	_SNCSMHDY_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.6643371582031	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.545	1	70.93	70.43	71.43	0.38416								0	0	0	0.29344	1	7821	7821		31.955	11.473	1				54905	6419	36634	36649	62206	62206					-0.16304407467623605
SNCSMHDY	8	Unmodified	_SNCSMHDY_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.6626892089844	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.784	1	71.168	70.668	71.668	0.38416								0	0	0	0.29871	1	7855	7855		23.042	1.0826	1				54906	6419	36634	36649	62207	62207					-0.16304407467623605
SNCSMHDY	8	Unmodified	_SNCSMHDY_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.6643371582031	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.216	1	71.6	71.1	72.1	0.38449								0	0	0	0.29871	1	7917	7917		23.042	3.6825	1				54907	6419	36634	36649	62208	62208					-0.16304407467623605
SNCSMHDY	8	Unmodified	_SNCSMHDY_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.66485595703125	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.693	1	70.24	69.74	70.74	0.54693								0	0	0	0.29344	1	7730	7730		31.955	2.8053	1				54908	6419	36634	36649	62209	62209					-0.16304407467623605
SNCSMHDY	8	Unmodified	_SNCSMHDY_					0	0	0		nc|ENSG00000168619|Q9Y3Q7-2|ADAM18;ENSG00000168619|ENST00000265707|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.66455078125	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.795	1	70.342	69.842	70.842	0.54693								0	0	0	0.29344	1	7744	7744		31.955	7.7521	1				54909	6419	36634	36649	62210	62210					-0.16304407467623605
SNCYLLID	8	Unmodified	_SNCYLLID_					0	0	0			REV__ENSG00000177558|ENST00000324675|FAM187B	REV__ENSG00000177558|ENST00000324675|FAM187B	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.7255859375	2	470.725861	939.437169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.038	1	74.165	73.665	74.665	0.12711								0	0	0	0.29596	1	6826	6826		35.618	3.6634	1		+		54910	22217	36635	36650	62211	62211					-0.034972564824897745
SNDKVYEN	8	Unmodified	_SNDKVYEN_					0	0	0		nc|ENSG00000169398|Q05397-2|PTK2;nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-6|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.7179260253906	2	484.719621	967.42469	-0.72919	-0.00035345	-1.9303	-0.00093564	-2.6595	-0.0012891	484.7185522686156	98.602	4.243	98.83	95.547	99.79	0.22787					182	99	2	0	0	0	0.87064	2	10219	10219;10232		37.159	1.5408	1	545110			54911	6494	36636	36651	62212;62213	62212					-0.06032576621191765
SNDKVYEN	8	Unmodified	_SNDKVYEN_					0	0	0		nc|ENSG00000169398|Q05397-2|PTK2;nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-6|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.71826171875	2	484.719621	967.42469	0.76607	0.00037133	-3.3896	-0.001643	-2.6235	-0.0012717	484.71784448733064	98.881	4.1852	99.038	95.672	99.857	0.15659					143	97	2	0	0	0	0.88601	1	10274	10274		34.173	4.331	1	472970			54912	6494	36636	36651	62214	62214					-0.06032576621191765
SNDKVYEN	8	Unmodified	_SNDKVYEN_					0	0	0		nc|ENSG00000169398|Q05397-2|PTK2;nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-6|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.71820068359375	2	484.719621	967.42469	-1.6647	-0.00080692	-1.0387	-0.00050347	-2.7034	-0.0013104	484.718975245025	98.748	4.2341	98.941	95.671	99.905	0.1928					171	98	2	0	0	0	0.89494	1	10235	10235		37.159	0	1	437580			54913	6494	36636	36651	62215	62215					-0.06032576621191765
SNDKVYEN	8	Unmodified	_SNDKVYEN_					0	0	0		nc|ENSG00000169398|Q05397-2|PTK2;nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-6|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.71923828125	2	484.719621	967.42469	-1.6647	-0.00080693	-1.1726	-0.0005684	-2.8374	-0.0013753	484.71886476647086	100.24	1.3318	100.42	99.843	101.18	0.17199					60	30	3	0	0	0	0.89494	1	10383	10383		37.159	0.13063	1	492530			54914	6494	36636	36651	62216	62216					-0.06032576621191765
SNDKVYEN	8	Unmodified	_SNDKVYEN_					0	0	0		nc|ENSG00000169398|Q05397-2|PTK2;nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-6|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-2|PTK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7181701660156	2	484.719621	967.42469	1.0671	0.00051723	-3.9124	-0.0018964	-2.8453	-0.0013792	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.90983	1	11984	11984		42.396	8.4745	1	7522200			54915	6494	36636	36651	62217	62217					-0.06032576621191765
SNDRFKSNRG	10	Unmodified	_SNDRFKSNRG_					0	0	0			REV__ENSG00000116668|ENST00000367500|SWT1	REV__ENSG00000116668|ENST00000367500|SWT1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.7967529296875	2	590.794518	1179.57448	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.258	1	18.181	17.681	18.681	-0.07671								0	0	0	0.45132	1	283	283		16.717	0.71061	1		+		54916	18208	36637	36652	62218	62218					-0.008122115587411827
SNECGNAI	8	Unmodified	_SNECGNAI_					0	0	0		ENST00000588534.1_1_19:2832263-2834847:+|nuORF;ENSG00000172006|ENST00000317243|ZNF554	ENST00000588534.1_1_19:2832263-2834847:+|nuORF	ENST00000588534.1_1_19:2832263-2834847:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.1700134277344	2	404.16871	806.322867	0.028783	1.1633E-05	2.5917	0.0010475	2.6205	0.0010591	404.17015585403414	78.633	4.5965	78.579	78.135	82.731	-0.053558					226	127	5	0	0	0	0.87479	1	7976	7976		30.504	1.3541	1	6964800			54917	6734	36638	36653	62219	62219					-0.08804146244597177
SNEPISINIVT	11	Unmodified	_SNEPISINIVT_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X;REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y	REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.7994995117188	2	593.819335	1185.62412	-0.067843	-4.0286E-05	1.1766	0.0006987	1.1088	0.00065841	593.8193315994026	80.877	0.99442	81.403	80.653	81.647	0.52676					33	23	2	0	0	0	0.17382	1	9295	9295		16.007	0	1	149410	+		54918	17333;17099	36639	36654	62220	62220					0.03873058606700397
SNEQWSCH	8	Unmodified	_SNEQWSCH_					0	0	0			REV__ENST00000498097.5_1_2:99770790-99770877:-|nuORF	REV__ENST00000498097.5_1_2:99770790-99770877:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.6877746582031	2	495.690341	989.366129	-1.3353	-0.0006619	-3.9881	-0.0019769	-5.3234	-0.0026388	495.68821626413336	88.345	0.78981	88.816	88.524	89.314	0.47068					47	19	3	0	0	0	0.88601	2	10434	10434;10460		45.952	3.6689	1	1705100	+		54919	27780	36640	36655	62221;62222	62221					-0.12897956467315908
SNETCSGK	8	Unmodified	_SNETCSGK_					0	0	0		nc|ENSG00000138759|Q86XX4|FRAS1;ENSG00000138759|ENST00000512123|FRAS1;nc|ENSG00000138759|Q86XX4-5|FRAS1	nc|ENSG00000138759|Q86XX4|FRAS1	nc|ENSG00000138759|Q86XX4|FRAS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.17578125	2	413.173992	824.333432	-0.18652	-7.7066E-05	0.37421	0.00015461	0.18769	7.7547E-05	413.17423199845024	95.424	0.53081	95.49	95.181	95.712	0.065918					16	12	2	0	0	0	0.4196	1	9982	9982		19.997	0.89325	1	167830			54920	4327	36641	36656	62223	62223					-0.0857616359014628
SNETSHNSH	9	Unmodified	_SNETSHNSH_					0	0	0			REV__nc|ENSG00000283228|O00305-4|CACNB4	REV__nc|ENSG00000283228|O00305-4|CACNB4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.30810546875	2	506.707577	1011.4006	-1.0265	-0.00052012	2.9456	0.0014926	1.9192	0.00097245	506.70891305521235	45.142	0.52299	45.138	44.881	45.404	-0.0041618					19	11	2	0	0	0	0.20789	1	3551	3551		35.618	0	1	134570	+		54921	22521	36642	36657	62224	62224					-0.10464417054856767
SNEVMVKLL	9	Unmodified	_SNEVMVKLL_					0	0	0			REV__nc|ENSG00000156931|Q8N3P4-2|VPS8	REV__nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7928466796875	2	516.791535	1031.56852	-0.27075	-0.00013992	3.9455	0.002039	3.6748	0.0018991	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.71772	1	8863	8863		39.253	2.0937	1	817800	+		54922	20517	36643	36658	62225	62225					0.05399553885399655
SNFALCFIN	9	Unmodified	_SNFALCFIN_					0	0	0			REV__ENST00000553943.1_1_14:69585909-69589057:-|nuORF	REV__ENST00000553943.1_1_14:69585909-69589057:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7706909179688	2	514.747127	1027.4797	0.32248	0.000166	2.009	0.0010341	2.3315	0.0012001	514.747467384873	51.507	0.50054	51.942	51.617	52.118	0.43505					16	11	2	0	0	0	0.20789	1	5138	5138		21.96	0	1	131820	+		54923	19589	36644	36659	62226	62226					-0.03293861354245564
SNFKGISAF	9	Unmodified	_SNFKGISAF_					0	0	0		ENST00000341165.10_2_17:41362655-41362730:+|nuORF	ENST00000341165.10_2_17:41362655-41362730:+|nuORF	ENST00000341165.10_2_17:41362655-41362730:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2860412597656	2	485.753267	969.491981	0.78868	0.0003831	-2.1687	-0.0010535	-1.38	-0.00067036	485.75259237730853	50.927	0.61332	51.678	51.408	52.021	0.75174					25	14	2	0	0	0	0.20789	1	5086	5086		44.117	0	1	226170			54924	10241	36645	36660	62227	62227					0.006014983804220719
SNFQVVIIT	9	Unmodified	_SNFQVVIIT_					0	0	0			REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.27496337890625	2	510.78985	1019.56515	1.0934	0.00055852	-1.6626	-0.00084923	-0.56915	-0.00029071	510.78876083894863	56.981	0.65749	57.536	57.27	57.927	0.55512					29	15	3	0	0	0	0.20789	1	5884	5884		26.693	11.828	1	528410	+		54925	29996	36646	36661	62228	62228					0.056146271030456774
SNFQVVIIT	9	Unmodified	_SNFQVVIIT_					0	0	0			REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	REV__nc|ENSG00000164951|Q9P0J1-2|PDP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	510.78985	1019.56515	-0.6752	-0.00034489	0.28548	0.00014582	-0.38972	-0.00019907	510.7898496524143	57.147	0.65186	57.542	57.242	57.894	0.3949	0.0030557	0.0011224	NaN	26.693	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	474650	+		54926	29996	36646	36661							0.056146271030456774
SNGFKNCLI	9	Unmodified	_SNGFKNCLI_					0	0	0			REV__ENST00000486187.5_1_10:43078317-43078551:-|nuORF	REV__ENST00000486187.5_1_10:43078317-43078551:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.2496337890625	2	498.252577	994.490601	-0.069747	-3.4752E-05	-3.6845	-0.0018358	-3.7543	-0.0018706	498.25088875748816	84.603	2.5601	84.67	83.598	86.158	0.067169					118	58	3	0	0	0	0.77244	1	8431	8431		32.812	2.3088	1	104900	+		54927	27541	36647	36662	62229	62229					-0.006864589799761234
SNGLAAEPVAM	11	Unmodified	_SNGLAAEPVAM_					0	0	0			REV__ENST00000355451.7_1_7:44425089-44425335:-|nuORF	REV__ENST00000355451.7_1_7:44425089-44425335:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.6079711914062	2	530.260599	1058.50665	0.013454	7.134E-06	1.3566	0.00071937	1.3701	0.00072651	530.2610244333974	74.772	0.45587	75.336	75.128	75.584	0.56458					19	10	3	0	0	0	0.16822	1	8492	8492		22.58	0	1	87464	+		54928	25378	36648	36663	62230	62230					-0.020267975337446842
SNGRHLKSL	9	Unmodified	_SNGRHLKSL_					0	0	0		ENSG00000023839|ENST00000647814|ABCC2	ENSG00000023839|ENST00000647814|ABCC2	ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.2901611328125	2	506.28834	1010.56213	0.82926	0.00041984	1.7071	0.00086431	2.5364	0.0012842	506.2890799919439	83.859	0.70627	84.314	83.937	84.644	0.45556					43	16	3	0	0	0	0.64922	1	9782	9782		44.117	0	1	561920			54929	862	36649	36664	62231	62231					0.057267967688858334
SNGRHLKSL	9	Unmodified	_SNGRHLKSL_					0	0	0		ENSG00000023839|ENST00000647814|ABCC2	ENSG00000023839|ENST00000647814|ABCC2	ENSG00000023839|ENST00000647814|ABCC2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	506.28834	1010.56213	-0.56476	-0.00028593	3.1819	0.0016109	2.6171	0.001325	506.28972621872936	83.833	0.66986	84.269	83.918	84.588	0.43538	-0.022648	0.00085777	NaN	44.117	40	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	538930			54930	862	36649	36664							0.057267967688858334
SNGRKQVF	8	Unmodified	_SNGRKQVF_					0	0	0			REV__ENST00000445194.2_1_20:29873705-29874359:-|nuORF	REV__ENST00000445194.2_1_20:29873705-29874359:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.2555847167969	2	468.256508	934.498464	-1.0017	-0.00046905	-2.4842	-0.0011632	-3.4859	-0.0016323	468.2552173631195	81.886	3.8728	82.031	80.973	84.845	0.14513					157	90	2	0	0	0	0.89494	1	7958	7958		37.159	1.5408	1	195040	+		54931	17712	36650	36665	62232	62232					0.0285943633180068
SNGSLDLEKL	10	Unmodified	_SNGSLDLEKL_					0	0	0			REV__nc|ENSG00000091592|Q9C000-5|NLRP1	REV__nc|ENSG00000091592|Q9C000-5|NLRP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3033447265625	2	538.285128	1074.5557	-0.062788	-3.3798E-05	0.25175	0.00013551	0.18896	0.00010172	538.2853931152137	51.909	0.40681	52.576	52.23	52.637	0.6673					15	9	2	0	0	0	0.37624	1	5185	5185		41.427	14.734	1	351990	+		54932	17019	36651	36666	62233	62233					0.0214081402687043
SNGVIKKVAT	10	Unmodified	_SNGVIKKVAT_					0	0	0			REV__nc|ENSG00000291154|O95744|PMS2P2	REV__nc|ENSG00000291154|O95744|PMS2P2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.8075866699219	2	508.808574	1015.60259	-0.95319	-0.00048499	-0.53133	-0.00027035	-1.4845	-0.00075534	508.8082107511822	83.728	2.644	83.728	82.933	85.577	0					147	63	5	0	0	0	0.85251	1	7878	7878		19.997	0	1	4920100	+		54933	30303	36652	36667	62234	62234					0.09541718368643615
SNHTVTEF	8	Unmodified	_SNHTVTEF_					0	0	0		ENSG00000174914|ENST00000642097|OR9G1	ENSG00000174914|ENST00000642097|OR9G1	ENSG00000174914|ENST00000642097|OR9G1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.7145690917969	2	467.716882	933.41921	0.51266	0.00023978	-3.3259	-0.0015556	-2.8132	-0.0013158	467.71522088082065	72.056	0.78386	72.186	71.901	72.685	0.1301					42	25	2	0	0	0	0.87064	1	6581	6581		29.15	0	1	143620			54934	6970	36653	36668	62235	62235					-0.05016255412999726
SNIAKLAKK	9	Unmodified	_SNIAKLAKK_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.27801513671875	2	486.813659	971.612765	0.87608	0.00042649	-1.31	-0.00063771	-0.43389	-0.00021122	486.8129784494124	33.155	0.54911	33.367	33.102	33.651	0.21168					20	12	2	0	0	0	0.20789	1	2381	2381		25.574	14.063	1	128510	+		54935	22085	36654	36669	62236	62236					0.12582326093900065
SNIAKLAKK	9	Unmodified	_SNIAKLAKK_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	486.813659	971.612765	0.27869	0.00013567	-0.22631	-0.00011017	0.052379	2.5499E-05	486.8132587599242	33.141	0.67627	33.311	32.976	33.653	0.16971	-0.028173	0.00062527	NaN	31.53	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121130	+		54936	22085	36654	36669							0.12582326093900065
SNIIQIPK	8	Unmodified	_SNIIQIPK_					0	0	0			REV__nc|ENSG00000157538|O14972-2|VPS26C	REV__nc|ENSG00000157538|O14972-2|VPS26C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7931213378906	2	456.779285	911.544017	0.17696	8.0834E-05	-0.98634	-0.00045054	-0.80938	-0.00036971	456.77876260181165	36.09	0.30146	36.193	35.951	36.253	0.10306					11	8	2	0	0	0	0.4196	1	1939	1939		30.504	0	1	57916	+		54937	20548	36655	36670	62237	62237					0.08470661794171974
SNIKKGKEI	9	Unmodified	_SNIKKGKEI_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8074951171875	2	508.808574	1015.60259	-0.31062	-0.00015805	-0.84428	-0.00042958	-1.1549	-0.00058762	508.80800447474485	82.779	1.2447	83.21	82.754	83.998	0.43108					73	29	4	0	0	0	0.78536	1	9578	9578		29.15	0	1	3073800			54938	3599	36656	36671	62238	62238					0.09541718368666352
SNIKNVLWTF	10	Unmodified	_SNIKNVLWTF_					0	0	0			REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3424682617188	2	611.334956	1220.65536	0.20764	0.00012693	1.864	0.0011395	2.0716	0.0012664	611.3358423834037	80.837	1.6482	81.259	80.427	82.075	0.4215					76	39	3	0	0	0	0.86297	1	9298	9298		20.837	0	1	1617600	+		54939	22001	36657	36672	62239	62239					0.05385676431455977
SNILNKVKT	9	Unmodified	_SNILNKVKT_					0	0	0		ENST00000554544.5_1_14:94547747-94568847:+|nuORF	ENST00000554544.5_1_14:94547747-94568847:+|nuORF	ENST00000554544.5_1_14:94547747-94568847:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8076171875	2	508.808574	1015.60259	-0.31062	-0.00015805	-0.84428	-0.00042958	-1.1549	-0.00058762	508.80800447474485	82.779	1.2447	83.21	82.754	83.998	0.43108					73	29	4	0	0	0	0.78536	1	9567	9567		29.15	6.5699	1	3073800			54940	13722	36658	36673	62240	62240					0.09541718368666352
SNILPLLI	8	Unmodified	_SNILPLLI_					0	0	0			REV__ENSG00000134115|ENST00000446702|CNTN6	REV__ENSG00000134115|ENST00000446702|CNTN6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7886962890625	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.81724	1	2638	2638		14.664	0	1	10215000	+		54941	19116	36659	36674	62241	62241					0.11308733942325944
SNIPHFLVLLI	11	Unmodified	_SNIPHFLVLLI_					0	0	0			REV__nc|ENSG00000170820|P23945-3|FSHR	REV__nc|ENSG00000170820|P23945-3|FSHR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5927734375	3	422.592058	1264.75434	-1.8117	-0.0007656	4.0069	0.0016933	2.1952	0.00092767	422.59357864263933	54.504	2.542	54.559	53.757	56.299	0.055611					235	90	4	0	0	0	0.75121	1	4563	4563		21.78	5.063	1	1177200	+		54942	21689	36660	36675	62242	62242					0.13255699396381715
SNIRIGDIY	9	Unmodified	_SNIRIGDIY_					0	0	0			REV__ENSG00000131375|ENST00000253693|CAPN7	REV__ENSG00000131375|ENST00000253693|CAPN7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.7828369140625	2	525.782556	1049.55056	0.11208	5.8929E-05	-0.43197	-0.00022712	-0.31989	-0.00016819	525.7822497255718	49.61	0.55408	49.607	49.358	49.912	-0.0030327					29	12	3	0	0	0	0.41566	1	4173	4173		56.721	5.3856	1	238320	+		54943	18947	36661	36676	62243	62243					0.027765549549030766
SNIRIGDIY	9	Unmodified	_SNIRIGDIY_					0	0	0			REV__ENSG00000131375|ENST00000253693|CAPN7	REV__ENSG00000131375|ENST00000253693|CAPN7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.7817993164062	2	525.782556	1049.55056	0.36729	0.00019311	-0.81788	-0.00043003	-0.45059	-0.00023691	525.7819290997181	49.657	0.6651	49.66	49.367	50.032	0.0035973					33	14	3	0	0	0	0.51592	2	4212	4195;4212		51.193	15.574	1	215240	+		54944	18947	36661	36676	62244;62245	62245					0.027765549549030766
SNIRRIPR	8	Unmodified	_SNIRRIPR_					0	0	0		nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1;ENSG00000204104|ENST00000373327|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3103332519531	2	506.312149	1010.60975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.804	1	63.835	63.335	64.335	0.030243								0	0	0	0.30579	1	5596	5596		16.473	0	1				54945	8413	36662	36677	62246	62246					0.10486495759732861
SNIVIPLI	8	Unmodified	_SNIVIPLI_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS;ENST00000465499.1_1_9:114128483-114132846:-|nuORF	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516784667969	2	434.778754	867.542954	-0.16716	-7.2676E-05	2.9383	0.0012775	2.7712	0.0012048	434.7801371461462	79.12	0.77901	79.179	78.599	79.378	0.059357					26	20	2	0	0	0	0.4196	1	7684	7684		33.516	0	1	71108			54946	4137	36663	36678	62247	62247					0.10388447425293634
SNKASGEI	8	Unmodified	_SNKASGEI_					0	0	0		ENSG00000125304|ENST00000376387|TM9SF2	ENSG00000125304|ENST00000376387|TM9SF2	ENSG00000125304|ENST00000376387|TM9SF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.2091064453125	2	403.20615	804.397747	2.9266	0.00118	4.1333	0.0016666	7.0599	0.0028466	403.2077473802554	85.716	2.0213	85.774	85.282	87.304	0.057899					111	46	4	0	0	0	0.89494	1	8713	8713		37.159	5.2042	1	1450600			54947	3380	36664	36679	62248	62248					-0.012276404416979858
SNKCPGSD	8	Unmodified	_SNKCPGSD_					0	0	0			REV__ENSG00000008300|ENST00000164024|CELSR3	REV__ENSG00000008300|ENST00000164024|CELSR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.1707763671875	2	404.16871	806.322867	2.4772	0.0010012	0.73353	0.00029647	3.2107	0.0012977	404.16914392538314	78.456	2.0058	78.508	78.086	80.092	0.051682					179	62	5	0	0	0	0.8537	1	7805	7805		25.574	0.12388	1	6709200	+		54948	16134	36665	36680	62249	62249					-0.08804146244585809
SNKHALLKKI	10	Unmodified	_SNKHALLKKI_					0	0	0			REV__ENSG00000198759|ENST00000361306|EGFL6	REV__ENSG00000198759|ENST00000361306|EGFL6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3692626953125	2	576.36659	1150.71863	0.5205	0.0003	4.1404	0.0023864	4.6609	0.0026864	576.3688108191589	39.411	1.3074	39.422	39.01	40.317	0.010704					81	33	3	0	0	0	0.8486	1	2413	2413		18.262	0.89712	1	325270	+		54949	23376	36666	36681	62250	62250					0.14929661939368088
SNKIAAVKH	9	Unmodified	_SNKIAAVKH_					0	0	0			REV__ENST00000495849.5_1_2:191897681-192012929:-|nuORF	REV__ENST00000495849.5_1_2:191897681-192012929:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.7184753417969	2	484.287808	966.561064	-0.73081	-0.00035392	0.68914	0.00033374	-0.041676	-2.0183E-05	484.28947110859076	100.16	0.39172	100.38	100.16	100.55	0.21511					12	8	2	0	0	0	0.20789	1	10437	10437		44.117	0	1	20665	+		54950	19465	36667	36682	62251	62251					0.07644582399996125
SNKIKILSN	9	Unmodified	_SNKIKILSN_					0	0	0		ENSG00000092439|ENST00000646667|TRPM7	ENSG00000092439|ENST00000646667|TRPM7	ENSG00000092439|ENST00000646667|TRPM7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.8079833984375	2	508.808574	1015.60259	-0.055595	-2.8287E-05	-1.6183	-0.00082341	-1.6739	-0.0008517	508.8077132921667	83.422	2.5883	83.489	82.396	84.985	0.066719					89	59	2	0	0	0	0.7932	1	8262	8262		21.96	0	1	2642300			54951	1699	36668	36683	62252	62252					0.09541718368654983
SNKIKILSN	9	Unmodified	_SNKIKILSN_					0	0	0		ENSG00000092439|ENST00000646667|TRPM7	ENSG00000092439|ENST00000646667|TRPM7	ENSG00000092439|ENST00000646667|TRPM7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.80780029296875	2	508.808574	1015.60259	0.80209	0.00040811	-1.9872	-0.0010111	-1.1852	-0.00060302	508.8074220934711	82.728	1.203	83.202	82.795	83.998	0.47383					78	28	4	0	0	0	0.75725	1	9642	9642		36.447	3.6343	1	3379300			54952	1699	36668	36683	62253	62253					0.09541718368654983
SNKIQCKL	8	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))SNKIQC(Carbamidomethyl (C))KL_	SNKIQC(1)KL		SNKIQC(69)KL		1	1	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|69|2|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|69|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7775268554688	2	516.778959	1031.54336	0.37479	0.00019368	-3.6825	-0.001903	-3.3077	-0.0017093	516.7769135133703	32.546	0.60094	32.672	32.417	33.018	0.12643					26	13	3	0	0	0	0.66521	1	2285	2285		68.787	7.8149	1	309760	+		54953	29637	36669	36684	62254	62254	356				0.02885499082822207
SNKLHLFV	8	Unmodified	_SNKLHLFV_					0	0	0			REV__ENST00000261497.8_1_17:20904411-20904570:-|nuORF	REV__ENST00000261497.8_1_17:20904411-20904570:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2774963378906	2	479.279452	956.544351	-0.93682	-0.000449	-3.4908	-0.001673	-4.4276	-0.002122	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.87922	1	8276	8276		31.955	6.3808	1	2046100	+		54954	24393	36670	36685	62255	62255					0.0643408151404401
SNKLHLFV	8	Unmodified	_SNKLHLFV_					0	0	0			REV__ENST00000261497.8_1_17:20904411-20904570:-|nuORF	REV__ENST00000261497.8_1_17:20904411-20904570:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.277587890625	2	479.279452	956.544351	-1.4767	-0.00070776	-2.9072	-0.0013934	-4.3839	-0.0021011	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.87922	1	7782	7782		31.955	5.2619	1	1785900	+		54955	24393	36670	36685	62256	62256					0.0643408151404401
SNKRLILG	8	Unmodified	_SNKRLILG_					0	0	0		ENSG00000121207|ENST00000336356|LRAT	ENSG00000121207|ENST00000336356|LRAT	ENSG00000121207|ENST00000336356|LRAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7870788574219	2	450.784902	899.55525	2.7552	0.001242	1.2344	0.00055646	3.9897	0.0017985	450.7851135648896	110.04	1.5878	110.02	109.66	111.25	-0.027641					85	55	2	0	0	0	0.86288	1	12189	12189		26.796	2.5934	1	241040			54956	3168	36671	36686	62257	62257					0.10145483888345552
SNKRMWLF	8	Unmodified	_SNKRMWLF_					0	0	0		ENST00000502773.5_1_4:157682716-157682860:-|nuORF	ENST00000502773.5_1_4:157682716-157682860:-|nuORF	ENST00000502773.5_1_4:157682716-157682860:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.287841796875	2	541.284211	1080.55387	0.81811	0.00044283	1.2902	0.00069837	2.1083	0.0011412	541.2847834834622	20.168	0.8377	20.239	19.945	20.783	0.071129					65	34	3	0	0	0	0.90465	1	480	480		40.573	4.1259	1	219780			54957	12862	36672	36687	62258	62258					0.016815265279092273
SNKSISIS	8	Unmodified	_SNKSISIS_					0	0	0		ENSG00000185069|ENST00000332411|KRT76;CON__Q01546	ENSG00000185069|ENST00000332411|KRT76	ENSG00000185069|ENST00000332411|KRT76	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	418.22930908203125	2	418.229625	834.444697	2.7763	0.0011611	-2.0801	-0.00086995	0.69625	0.00029119	418.2285479248724	27.365	1.3218	27.337	26.934	28.255	-0.027704					47	33	3	0	0	0	0.92394	1	1242	1242		47.657	0	1	65913		+	54958	600	36673	36688	62259	62259					0.020852191094377304
SNKVGKQCHS	10	Unmodified	_SNKVGKQCHS_					0	0	0		ENST00000555397.1_2_14:58979318-59014555:+|nuORF	ENST00000555397.1_2_14:58979318-59014555:+|nuORF	ENST00000555397.1_2_14:58979318-59014555:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2886962890625	2	544.26929	1086.52403	-0.92019	-0.00050083	3.0572	0.0016639	2.137	0.0011631	544.2705944592681	74.632	0.48768	75.023	74.787	75.275	0.3911					16	11	2	0	0	0	0.37624	1	8449	8449		20.947	9.4359	1	102840			54959	13732	36674	36689	62260	62260					-0.015774572080772487
SNKVILELH	9	Unmodified	_SNKVILELH_					0	0	0			REV__nc|ENSG00000147133|P21675-25|TAF1	REV__nc|ENSG00000147133|P21675-25|TAF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8074951171875	2	526.808574	1051.60259	2.0771	0.0010942	-3.8443	-0.0020252	-1.7672	-0.00093099	526.8065947880607	99.033	1.2732	99.395	98.525	99.798	0.36137					108	31	5	0	0	0	0.43338	1	11816	11816		55.504	0	1	32054000	+		54960	20054	36675	36690	62261	62261					0.07885718368675043
SNLAPRISD	9	Unmodified	_SNLAPRISD_					0	0	0			REV__ENSG00000159461|ENST00000290649|AMFR	REV__ENSG00000159461|ENST00000290649|AMFR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.7610778808594	2	486.759081	971.503609	0.0078129	3.803E-06	4.119	0.002005	4.1268	0.0020088	486.76094746193235	37.226	3.175	37.539	36.88	40.055	0.31312					217	77	4	0	0	0	0.73802	1	3165	3165		37.812	3.639	1	1950900	+		54961	20663	36676	36691	62262	62262					0.016716954037633514
SNLAPRISD	9	Unmodified	_SNLAPRISD_					0	0	0			REV__ENSG00000159461|ENST00000290649|AMFR	REV__ENSG00000159461|ENST00000290649|AMFR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.7616882324219	2	486.759081	971.503609	0.20856	0.00010152	3.8946	0.0018957	4.1032	0.0019973	486.76086709151963	37.199	3.1666	37.684	37.119	40.285	0.48581					216	76	4	0	0	0	0.71772	1	3154	3154		39.253	5.0803	1	2150800	+		54962	20663	36676	36691	62263	62263					0.016716954037633514
SNLEKKGKK	9	Unmodified	_SNLEKKGKK_					0	0	0			REV__ENST00000326043.4_1_16:79634418-79634580:-|nuORF	REV__ENST00000326043.4_1_16:79634418-79634580:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.314208984375	2	516.314023	1030.61349	0.96653	0.00049903	-1.1711	-0.00060464	-0.20454	-0.0001056	516.3133887311924	32.644	2.0073	32.856	32.593	34.6	0.21168					79	47	2	0	0	0	0.7932	1	2278	2278		24.519	2.5593	1	535970	+		54963	25073	36677	36692	62264	62264					0.09941120742928433
SNLIKLLMS	9	Unmodified	_SNLIKLLMS_					0	0	0		ENSG00000138095|ENST00000260665|LRPPRC	ENSG00000138095|ENST00000260665|LRPPRC	ENSG00000138095|ENST00000260665|LRPPRC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8033752441406	2	509.801903	1017.58925	0.68681	0.00035014	2.8448	0.0014503	3.5316	0.0018004	509.80326235241614	86.403	4.313	86.552	84.994	89.307	0.14902					345	101	5	0	0	0	0.7932	1	8635	8635		25.574	0	1	3017600			54964	4269	36678	36693	62265	62265					0.08116144265079583
SNLKMPVMI	9	Oxidation (M)	_SNLKM(Oxidation (M))PVMI_		SNLKM(0.985)PVM(0.015)I		SNLKM(18)PVM(-18)I	0	0	1			REV__ENST00000551620.5_1_12:69982032-69983296:+|nuORF	REV__ENST00000551620.5_1_12:69982032-69983296:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.7826538085938	2	524.780113	1047.54567	0.15343	8.0516E-05	4.3633	0.0022898	4.5167	0.0023703	524.7819319791219	54.377	0.4807	54.404	54.109	54.59	0.027035					28	17	2	0	0	0	0.6204	1	4831	4831		45.972	6.7194	2	103450	+		54965	28609	36679	36694	62266	62266		423			0.023802114962563792
SNLLVTGAH	9	Unmodified	_SNLLVTGAH_					0	0	0			REV__nc|ENSG00000100979|P55058-4|PLTP	REV__nc|ENSG00000100979|P55058-4|PLTP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30133056640625	2	456.250892	910.48723	0.10056	4.5879E-05	1.9543	0.00089166	2.0549	0.00093754	456.25151675834576	35.584	1.2446	35.524	35.283	36.528	-0.060333					46	35	2	0	0	0	0.20789	1	1862	1862		54.776	24.273	1	80844	+		54966	17232	36680	36695	62267	62267					0.028406142376638854
SNLPISPKE	9	Unmodified	_SNLPISPKE_					0	0	0		ENSG00000094975|ENST00000263688|SUCO	ENSG00000094975|ENST00000263688|SUCO	ENSG00000094975|ENST00000263688|SUCO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.7726135253906	2	492.771657	983.528761	-0.55043	-0.00027124	-0.30135	-0.0001485	-0.85178	-0.00041973	492.7716650672891	72.523	0.71144	72.482	72.201	72.912	-0.04039					34	25	2	0	0	0	0.68711	1	7095	7095		41.427	2.1738	1	85038			54967	1715	36681	36696	62268	62268					0.03633750206336117
SNLPIYDR	8	Unmodified	_SNLPIYDR_					0	0	0			REV__ENST00000483997.5_1_20:13976316-14032584:+|nuORF	REV__ENST00000483997.5_1_20:13976316-14032584:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.7828369140625	2	489.256174	976.497795	-1.9972	-0.00097714	0.0090764	4.4407E-06	-1.9881	-0.0009727	489.25601675871116	42.15	0.43525	42.564	42.427	42.863	0.4139					18	10	2	0	0	0	0.4196	1	3730	3730		27.882	10.517	1	261880	+		54968	21815	36682	36697	62269	62269					0.008605968920846863
SNLPIYDR	8	Unmodified	_SNLPIYDR_					0	0	0			REV__ENST00000483997.5_1_20:13976316-14032584:+|nuORF	REV__ENST00000483997.5_1_20:13976316-14032584:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	489.256174	976.497795	-1.8419	-0.00090114	0.42196	0.00020645	-1.4199	-0.0006947	489.2560784877741	42.08	0.43949	42.777	42.571	43.01	0.69754	0.10644	0.0002685	NaN	32.812	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	159920	+		54969	21815	36682	36697							0.008605968920846863
SNLPKPRRRLF	11	Unmodified	_SNLPKPRRRLF_					0	0	0			REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.94830322265625	3	461.949239	1382.82589	0.76558	0.00035366	-2.7573	-0.0012737	-1.9917	-0.00092005	461.9479074956451	104.93	2.309	105.04	104.7	107.01	0.10766					127	56	3	0	0	0	0.71803	1	11166	11166		28.577	5.1988	1	1259300	+		54970	28455	36683	36698	62270	62270					0.14978631873577797
SNLPKPRRRLF	11	Unmodified	_SNLPKPRRRLF_					0	0	0			REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	461.949239	1382.82589	-0.91989	-0.00042494	-0.88789	-0.00041016	-1.8078	-0.0008351	461.9486584634361	105.04	2.4115	105.04	104.79	107.2	0	0.011795	0.0014731	NaN	28.577	141	55	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	388840	+		54971	28455	36683	36698							0.14978631873577797
SNLPKPRRRLF	11	Unmodified	_SNLPKPRRRLF_					0	0	0			REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	461.949239	1382.82589	2.7816	0.001285	-4.3064	-0.0019893	-1.5248	-0.00070436	461.9469837881941	105.01	2.6422	104.97	104.37	107.01	-0.04039	-0.051865	-0.0032643	NaN	28.577	189	62	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	910570	+		54972	28455	36683	36698							0.14978631873577797
SNLPKPRRRLF	11	Unmodified	_SNLPKPRRRLF_					0	0	0			REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	461.949239	1382.82589	0.60317	0.00027863	-2.1577	-0.00099675	-1.5545	-0.00071812	461.94799833585347	104.88	2.7298	104.92	104.34	107.07	0.039856	-0.10964	-0.00028664	NaN	28.577	179	64	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	795280	+		54973	28455	36683	36698							0.14978631873577797
SNLPKPRRRLF	11	Unmodified	_SNLPKPRRRLF_					0	0	0			REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	461.949239	1382.82589	-1.0604	-0.00048985	-1.0457	-0.00048305	-2.1061	-0.0009729	461.94875024584394	104.85	1.7891	105.02	104.54	106.32	0.17096	-0.0069501	0.0012545	NaN	28.577	95	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	503860	+		54974	28455	36683	36698							0.14978631873577797
SNLPKPRRRLF	11	Unmodified	_SNLPKPRRRLF_					0	0	0			REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	461.949239	1382.82589	0.76558	0.00035366	-2.7573	-0.0012737	-1.9917	-0.00092005	461.9479074956451	104.93	2.309	105.04	104.7	107.01	0.10766	0.013692	-0.0011175	NaN	28.577	127	56	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1259300	+		54975	28455	36683	36698							0.14978631873577797
SNLPKPRRRLF	11	Unmodified	_SNLPKPRRRLF_					0	0	0			REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	REV__ENST00000539777.5_1_1:168105623-168105902:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	461.949239	1382.82589	1.3621	0.00062921	-3.9878	-0.0018422	-2.6258	-0.001213	461.9475144708983	104.94	0.50341	105.1	104.93	105.43	0.15583	0.072734	-0.0028229	NaN	28.577	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70012	+		54976	28455	36683	36698							0.14978631873577797
SNLRHVRVF	9	Unmodified	_SNLRHVRVF_					0	0	0		ENSG00000053900|ENST00000315368|ANAPC4;nc|ENSG00000053900|Q9UJX5-3|ANAPC4;ENST00000504256.5_1_4:25419211-25420001:+|nuORF	ENSG00000053900|ENST00000315368|ANAPC4	ENSG00000053900|ENST00000315368|ANAPC4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	564.3170166015625	2	564.325257	1126.63596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.044	1	57.077	56.577	57.577	0.033184								0	0	0	0.30053	1	5176	5176		30.504	7.4612	1				54977	1012	36684	36699	62271	62271					0.07770764931228769
SNLRQVGLKKP	11	Unmodified	_SNLRQVGLKKP_					0	0	0		nc|ENSG00000118407|Q7Z7B0-3|FILIP1;nc|ENSG00000118407|Q7Z7B0-2|FILIP1;ENSG00000118407|ENST00000237172|FILIP1	nc|ENSG00000118407|Q7Z7B0-3|FILIP1	nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2657165527344	3	413.922578	1238.7459	-1.8963	-0.00078494	-2.4081	-0.00099677	-4.3045	-0.0017817	413.9216712243394	42.664	0.21849	42.67	42.618	42.837	0.0057487					9	6	2	0	0	0	0.17521	1	2905	2905		17.167	0	1	50101			54978	3027	36685	36700	62272	62272					0.1360814547974769
SNLSASRKK	9	Unmodified	_SNLSASRKK_					0	0	0			REV__ENSG00000118308|ENST00000556887|IRAG2	REV__ENSG00000118308|ENST00000556887|IRAG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.2375793457031	2	495.788173	989.561792	-1.1852	-0.0005876	-3.5363	-0.0017532	-4.7215	-0.0023409	495.78625697844257	31.399	0.56674	31.479	31.077	31.644	0.079834					19	12	2	0	0	0	0.20789	1	2091	2091		36.447	0	1	62165	+		54979	18303	36686	36701	62273	62273					0.0665937704903854
SNLSEIKLE	9	Unmodified	_SNLSEIKLE_					0	0	0			REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	REV__nc|ENSG00000119685|Q6EMB2-2|TTLL5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.8285522460938	2	516.782222	1031.54989	-0.016795	-8.6793E-06	2.8685	0.0014824	2.8517	0.0014737	516.7844570733683	82.877	0.2036	83.308	83.171	83.374	0.43108					5	4	2	0	0	0	0.20789	1	9589	9589		36.447	4.9169	1	51661	+		54980	29808	36687	36702	62274	62274					0.03537715515176387
SNLTNYQE	8	Unmodified	_SNLTNYQE_					0	0	0		ENST00000470325.1_1_17:15231272-15234902:-|nuORF;ENSG00000125409|ENST00000395930|TEKT3	ENST00000470325.1_1_17:15231272-15234902:-|nuORF	ENST00000470325.1_1_17:15231272-15234902:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.71905517578125	2	484.719621	967.42469	0.76607	0.00037133	-3.3896	-0.001643	-2.6235	-0.0012717	484.71784448733064	98.881	4.1852	99.038	95.672	99.857	0.15659					143	97	2	0	0	0	0.87922	1	10161	10161		31.955	0.42505	1	472970			54981	3388	36688	36703	62275	62275					-0.06032576621191765
SNLVQLNI	8	Unmodified	_SNLVQLNI_					0	0	0		ENSG00000162763|ENST00000294818|LRRC52	ENSG00000162763|ENST00000294818|LRRC52	ENSG00000162763|ENST00000294818|LRRC52	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.91400146484375	2	450.761092	899.507631	-0.013724	-6.1864E-06	0.32561	0.00014677	0.31189	0.00014059	450.76103461915716	37.176	0.57889	37.152	36.949	37.528	-0.023979					23	12	3	0	0	0	0.4196	1	2417	2417		21.96	0	1	68501			54982	5733	36689	36704	62276	62276					0.053857848974644185
SNLVRHGG	8	Unmodified	_SNLVRHGG_					0	0	0			REV__ENST00000218089.13_1_X:123094664-123155260:+|nuORF	REV__ENST00000218089.13_1_X:123094664-123155260:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2275390625	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.92973	1	7539	7539		50.025	2.1089	1	634680	+		54983	24141	36690	36705	62277	62277					0.015265941262327942
SNLVRLRPG	9	Unmodified	_SNLVRLRPG_					0	0	0		ENSG00000116138|ENST00000375847|DNAJC16;nc|ENSG00000116138|Q9Y2G8-2|DNAJC16;ENST00000475133.5_1_1:15892828-15894669:+|nuORF	ENSG00000116138|ENST00000375847|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.309326171875	2	506.306532	1010.59851	0.34662	0.0001755	4.2773	0.0021656	4.6239	0.0023411	506.81007684679236	49.469	1.8985	49.512	48.558	50.457	0.04224					78	46	2	0	0	0	0.76255	1	3804	3804		35.618	2.8059	1	315680			54984	2902	36691	36706	62278	62278					0.09363673665598071
SNMEATETD	9	Unmodified	_SNMEATETD_					0	0	0		nc|ENSG00000160179|P45844-7|ABCG1;nc|ENSG00000160179|P45844-6|ABCG1;nc|ENSG00000160179|P45844-5|ABCG1;ENSG00000160179|ENST00000398449|ABCG1;nc|ENSG00000160179|P45844-3|ABCG1;nc|ENSG00000160179|P45844-2|ABCG1;nc|ENSG00000160179|P45844|ABCG1	nc|ENSG00000160179|P45844-7|ABCG1	nc|ENSG00000160179|P45844-7|ABCG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.1931457519531	2	499.192579	996.370605	0.87111	0.00043485	0.19861	9.9145E-05	1.0697	0.00053399	499.19258535124294	96.514	1.2773	96.919	96.59	97.867	0.40498					47	30	2	0	0	0	0.77244	1	11594	11594		32.812	4.9302	1	570350			54985	5558	36692	36707	62279	62279					-0.12772536835052506
SNMGSVSSLMQ	11	Unmodified	_SNMGSVSSLMQ_					0	0	0			REV__ENST00000319653.13_1_1:240601401-240635676:+|nuORF	REV__ENST00000319653.13_1_1:240601401-240635676:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.7503051757812	2	570.754824	1139.49509	-0.89595	-0.00051137	1.5725	0.0008975	0.67652	0.00038613	570.7555249223415	40.23	0.59241	40.819	40.557	41.149	0.58915					31	15	3	0	0	0	0.43778	1	3435	3435		56.434	3.3448	1	1264600	+		54986	24989	36693	36708	62280	62280					-0.06907362619381274
SNMGSVSSLMQ	11	Unmodified	_SNMGSVSSLMQ_					0	0	0			REV__ENST00000319653.13_1_1:240601401-240635676:+|nuORF	REV__ENST00000319653.13_1_1:240601401-240635676:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	570.754824	1139.49509	-0.89595	-0.00051137	1.5725	0.0008975	0.67652	0.00038613	570.7555249223415	40.23	0.59241	40.819	40.557	41.149	0.58915	0.015755	-0.0004532	NaN	56.434	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1264600	+		54987	24989	36693	36708							-0.06907362619381274
SNMNRTKN	8	Unmodified	_SNMNRTKN_					0	0	0		nc|ENSG00000006695|Q12887-2|COX10;ENSG00000006695|ENST00000261643|COX10	nc|ENSG00000006695|Q12887-2|COX10	nc|ENSG00000006695|Q12887-2|COX10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.7355041503906	2	482.735083	963.455613	0.026084	1.2592E-05	-0.9996	-0.00048254	-0.97352	-0.00046995	482.73459023192976	81.274	0.64876	81.695	81.309	81.957	0.4215					33	15	3	0	0	0	0.92394	1	9353	9353		47.657	1.6851	1	318090			54988	708	36694	36709	62281	62281					-0.027577017879252708
SNNGLVTT	8	Unmodified	_SNNGLVTT_					0	0	0		ENSG00000176200|ENST00000313253|OR4D11	ENSG00000176200|ENST00000313253|OR4D11	ENSG00000176200|ENST00000313253|OR4D11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.2087097167969	2	403.20615	804.397747	2.9266	0.00118	4.1333	0.0016666	7.0599	0.0028466	403.2077473802554	85.716	2.0213	85.774	85.282	87.304	0.057899					111	46	4	0	0	0	0.89962	1	8750	8750		38.806	3.1879	1	1450600			54989	7063	36695	36710	62282	62282					-0.012276404417207232
SNNVRMIRSIN	11	Unmodified	_SNNVRMIRSIN_					0	0	0			REV__ENST00000493673.1_1_1:151372075-151372920:+|nuORF	REV__ENST00000493673.1_1_1:151372075-151372920:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.780029296875	3	435.234827	1302.68265	-1.6372	-0.00071258	-2.3937	-0.0010418	-4.0309	-0.0017544	435.5687372322215	38.508	0.13681	38.519	38.454	38.591	0.010708					5	3	2	0	0	0	0.1747	1	2281	2281		34.087	7.3368	1	45917	+		54990	20657	36696	36711	62283	62283					0.04341836700223212
SNPGGEDEAD	10	Unmodified	_SNPGGEDEAD_					0	0	0			REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.6873779296875	2	495.685975	989.357398	0.12193	6.0441E-05	3.0023	0.0014882	3.1243	0.0015487	495.68749694904426	88.261	0.92693	88.71	88.395	89.321	0.44892					56	22	4	0	0	0	0.64457	2	10378	10378;10414		47.657	14.142	1	1448600	+		54991	21507	36697	36712	62284;62285	62284					-0.13770651622803598
SNPGGEDEAD	10	Unmodified	_SNPGGEDEAD_					0	0	0			REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	495.685975	989.357398	-0.073486	-3.6426E-05	3.1673	0.00157	3.0938	0.0015336	495.6875466230014	89.123	0.8187	89.191	88.956	89.775	0.068161	0.17547	-0.00060932	NaN	47.657	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112650	+		54992	21507	36697	36712							-0.13770651622803598
SNPGGEDEAD	10	Unmodified	_SNPGGEDEAD_					0	0	0			REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	495.685975	989.357398	1.372	0.0006801	2.1312	0.0010564	3.5032	0.0017365	495.68695806386756	89.383	0.60281	89.31	88.962	89.565	-0.07238	0.29465	-0.0016365	NaN	47.657	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102550	+		54993	21507	36697	36712							-0.13770651622803598
SNPGGEDEAD	10	Unmodified	_SNPGGEDEAD_					0	0	0			REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	495.685975	989.357398	-0.6289	-0.00031173	3.2113	0.0015918	2.5824	0.0012801	495.6878743459078	89.022	0.77776	89.072	88.839	89.616	0.050415	0.056337	-0.00056566	NaN	47.657	29	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112600	+		54994	21507	36697	36712							-0.13770651622803598
SNPGGEDEAD	10	Unmodified	_SNPGGEDEAD_					0	0	0			REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	495.685975	989.357398	-0.58324	-0.0002891	4.0971	0.0020309	3.5138	0.0017418	495.6878256161389	88.754	0.71675	88.961	88.667	89.384	0.20731	-0.054192	0.00031245	NaN	47.657	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199050	+		54995	21507	36697	36712							-0.13770651622803598
SNPGGEDEAD	10	Unmodified	_SNPGGEDEAD_					0	0	0			REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	495.685975	989.357398	0.69152	0.00034278	2.8723	0.0014237	3.5638	0.0017665	495.6872500326845	88.897	0.59043	89.048	88.761	89.352	0.15055	0.031853	-0.00090179	NaN	47.657	30	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	236060	+		54996	21507	36697	36712							-0.13770651622803598
SNPGGEDEAD	10	Unmodified	_SNPGGEDEAD_					0	0	0			REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	495.685975	989.357398	-1.629	-0.00080748	5.0482	0.0025023	3.4192	0.0016948	495.68842662273323	88.845	0.68525	89.017	88.701	89.386	0.17234	0.0017137	0.0012553	NaN	47.657	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	238410	+		54997	21507	36697	36712							-0.13770651622803598
SNPHLKEGSVT	11	Unmodified	_SNPHLKEGSVT_					0	0	0		ENST00000465121.5_1_3:52018080-52021658:+|nuORF;nc|ENSG00000243989|Q03154-2|ACY1;nc|ENSG00000243989|Q03154-4|ACY1;ENSG00000243989|ENST00000636358|ACY1	ENST00000465121.5_1_3:52018080-52021658:+|nuORF	ENST00000465121.5_1_3:52018080-52021658:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	584.8017578125	2	584.801477	1167.5884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.644	1	65.644	65.144	66.144	0								0	0	0	0.56276	1	5795	5795		46.457	6.3986	1				54998	8816	36698	36713	62286	62286					0.01131021149717526
SNPIAHLK	8	Unmodified	_SNPIAHLK_					0	0	0		ENSG00000152580|ENST00000282466|IGSF10	ENSG00000152580|ENST00000282466|IGSF10	ENSG00000152580|ENST00000282466|IGSF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.25506591796875	2	440.255977	878.497401	0.43968	0.00019357	-1.7375	-0.00076495	-1.2978	-0.00057137	440.2550261626726	67.317	0.79267	67.444	67.122	67.915	0.12748					63	30	3	0	0	0	0.87792	1	6006	6006		31.53	1.6883	1	418260			54999	5185	36699	36714	62287	62287					0.05329221962892916
SNPLLAHK	8	Unmodified	_SNPLLAHK_					0	0	0			REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2546081542969	2	440.255977	878.497401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.522	1	60.489	59.989	60.989	-0.032509								0	0	0	0.29631	1	5715	5715		25.45	1.2474	1		+		55000	25675	36700	36715	62288	62288					0.05329221962892916
SNPLLAHK	8	Unmodified	_SNPLLAHK_					0	0	0			REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.256103515625	2	440.255977	878.497401	-1.4995	-0.00066014	-0.016865	-7.4251E-06	-1.5163	-0.00066757	440.2559096543124	60.596	0.55002	60.697	60.508	61.058	0.10082					39	23	2	0	0	0	0.87922	2	5242	5242;5250		37.159	5.2042	1	235130	+		55001	25675	36700	36715	62289;62290	62289					0.05329221962892916
SNPLLAHK	8	Unmodified	_SNPLLAHK_					0	0	0			REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2553405761719	2	440.255977	878.497401	0.37519	0.00016518	-1.741	-0.00076649	-1.3658	-0.00060131	440.2550792506915	60.127	0.96645	60.243	59.965	60.931	0.11676					48	34	2	0	0	0	0.8347	1	5210	5210		23.042	0	1	370110	+		55002	25675	36700	36715	62291	62291					0.05329221962892916
SNPLLAHK	8	Unmodified	_SNPLLAHK_					0	0	0			REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.255126953125	2	440.255977	878.497401	0.43968	0.00019357	-1.7375	-0.00076495	-1.2978	-0.00057137	440.2550261626726	67.317	0.79267	67.444	67.122	67.915	0.12748					63	30	3	0	0	0	0.87479	1	6026	6026		30.504	1.3541	1	418260	+		55003	25675	36700	36715	62292	62292					0.05329221962892916
SNPLLAHK	8	Unmodified	_SNPLLAHK_					0	0	0			REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2569580078125	2	440.255977	878.497401	-0.80222	-0.00035318	-0.17673	-7.7804E-05	-0.97895	-0.00043099	440.255838119575	56.406	1.4135	56.802	56.556	57.97	0.39672					60	33	3	0	0	0	0.84341	1	5817	5817		24.203	0	1	2568800	+		55004	25675	36700	36715	62293	62293					0.05329221962892916
SNPLLAHK	8	Unmodified	_SNPLLAHK_					0	0	0			REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	REV__ENST00000370982.3_1_1:68168948-68169056:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2560729980469	2	440.255977	878.497401	0.6738	0.00029664	-1.6208	-0.00071356	-0.94699	-0.00041692	440.2552029440019	56.238	1.654	56.797	56.541	58.195	0.55953					66	39	3	0	0	0	0.85277	1	5852	5852		25.45	0	1	2122700	+		55005	25675	36700	36715	62294	62294					0.05329221962892916
SNPLPVPR	8	Unmodified	_SNPLPVPR_					0	0	0		ENST00000460939.5_1_11:62369776-62370417:-|nuORF;nc|ENSG00000149499|Q32P44-2|EML3	ENST00000460939.5_1_11:62369776-62370417:-|nuORF	ENST00000460939.5_1_11:62369776-62370417:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.25439453125	2	440.255977	878.497401	-1.4879	-0.00065508	-0.26291	-0.00011575	-1.7509	-0.00077082	440.2558124081508	66.549	0.68278	66.682	66.36	67.042	0.13326					60	29	3	0	0	0	0.89962	1	5895	5895		38.806	4.6336	1	243800			55006	12017	36701	36716	62295	62295					0.05329221962904285
SNPLPVPR	8	Unmodified	_SNPLPVPR_					0	0	0		ENST00000460939.5_1_11:62369776-62370417:-|nuORF;nc|ENSG00000149499|Q32P44-2|EML3	ENST00000460939.5_1_11:62369776-62370417:-|nuORF	ENST00000460939.5_1_11:62369776-62370417:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2566833496094	2	440.255977	878.497401	0.6738	0.00029664	-1.6208	-0.00071356	-0.94699	-0.00041692	440.2552029440019	56.238	1.654	56.797	56.541	58.195	0.55953					66	39	3	0	0	0	0.84341	1	5815	5815		24.203	3.7209	1	2122700			55007	12017	36701	36716	62296	62296					0.05329221962904285
SNPPLATI	8	Unmodified	_SNPPLATI_					0	0	0		ENSG00000082701|ENST00000264235|GSK3B;nc|ENSG00000082701|P49841-2|GSK3B	ENSG00000082701|ENST00000264235|GSK3B	ENSG00000082701|ENST00000264235|GSK3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7302551269531	2	406.729261	811.443968	-0.18786	-7.6407E-05	-2.7564	-0.0011211	-2.9442	-0.0011975	406.7280690694445	76.123	2.0682	76.173	74.921	76.99	0.049194					93	66	2	0	0	0	0.87064	1	7382	7382		29.15	2.3535	1	123610			55008	1490	36702	36717	62297	62297					0.03070424460383947
SNPQVQLF	8	Unmodified	_SNPQVQLF_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.7459411621094	2	466.745442	931.476331	0.14352	6.6988E-05	0.25923	0.000121	0.40275	0.00018798	466.74538507167864	57.568	0.91265	58.123	57.808	58.72	0.55513					43	22	3	0	0	0	0.73851	1	6020	6020		65.803	12.452	1	999700			55009	3805	36703	36718	62298	62298					0.007852118633763894
SNPRLVQW	8	Unmodified	_SNPRLVQW_					0	0	0		ENST00000532710.5_1_11:4116209-4127349:+|nuORF	ENST00000532710.5_1_11:4116209-4127349:+|nuORF	ENST00000532710.5_1_11:4116209-4127349:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.2691955566406	2	500.272158	998.529764	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.601	1	77.17	76.67	77.67	0.56836								0	0	0	0.2939	1	8730	8730		27.882	1.1893	1				55010	13382	36704	36719	62299	62299					0.03044009365896727
SNPRRTSF	8	Unmodified	_SNPRRTSF_					0	0	0		ENST00000419425.1_1_2:37839369-37870067:+|nuORF	ENST00000419425.1_1_2:37839369-37870067:+|nuORF	ENST00000419425.1_1_2:37839369-37870067:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.75299072265625	2	482.75159	963.488627	-0.53192	-0.00025679	3.6538	0.0017639	3.1218	0.0015071	482.7532217618567	76.334	0.68707	76.902	76.474	77.162	0.56836					41	18	3	0	0	0	0.89494	1	8672	8672		37.159	3.6661	1	757670			55011	11438	36705	36720	62300	62300					0.005422483264283073
SNPSGNYSP	9	Unmodified	_SNPSGNYSP_					0	0	0			REV__ENSG00000115112|ENST00000263707|TFCP2L1	REV__ENSG00000115112|ENST00000263707|TFCP2L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.69769287109375	2	461.698689	921.382825	-0.84053	-0.00038807	-0.64669	-0.00029858	-1.4872	-0.00068665	461.6982735900567	36.523	0.89709	36.47	36.02	36.917	-0.053558					42	19	3	0	0	0	0.76853	1	2447	2447		33.922	1.9668	1	262950	+		55012	18086	36706	36721	62301	62301					-0.08101132309707282
SNPVLPPKKI	10	Unmodified	_SNPVLPPKKI_					0	0	0		nc|ENSG00000164113|Q96M93-3|ADAD1;nc|ENSG00000164113|Q96M93-2|ADAD1;ENSG00000164113|ENST00000296513|ADAD1	nc|ENSG00000164113|Q96M93-3|ADAD1	nc|ENSG00000164113|Q96M93-3|ADAD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8401489257812	2	546.842416	1091.67028	-0.49529	-0.00027085	-3.9856	-0.0021795	-4.4809	-0.0024504	546.8402497724348	101.28	3.7061	101.28	100.69	104.39	0					228	91	5	0	0	0	0.49268	1	10369	10369		56.434	1.6575	1	22090000			55013	5920	36707	36722	62302	62302					0.12811168299458586
SNPVLPPKKI	10	Unmodified	_SNPVLPPKKI_					0	0	0		nc|ENSG00000164113|Q96M93-3|ADAD1;nc|ENSG00000164113|Q96M93-2|ADAD1;ENSG00000164113|ENST00000296513|ADAD1	nc|ENSG00000164113|Q96M93-3|ADAD1	nc|ENSG00000164113|Q96M93-3|ADAD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8402099609375	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.4892	1	10616	10616		56.721	3.7844	1	44929000			55014	5920	36707	36722	62303	62303					0.12811168299458586
SNPVVCTQ	8	Unmodified	_SNPVVCTQ_					0	0	0		ENSG00000184012|ENST00000332149|TMPRSS2;nc|ENSG00000184012|O15393-2|TMPRSS2	ENSG00000184012|ENST00000332149|TMPRSS2	ENSG00000184012|ENST00000332149|TMPRSS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.30572509765625	2	424.202553	846.390553	0.90454	0.00038371	-3.2844	-0.0013933	-2.3799	-0.0010096	424.1998850206957	23.231	0.39253	22.812	22.544	22.936	-0.41879					18	9	3	0	0	0	0.4196	1	1023	1023		19.104	0	1	21933			55015	7579	36708	36723	62304	62304					-0.03878696313779528
SNQEYLDL	8	Unmodified	_SNQEYLDL_					0	0	0		nc|ENSG00000077782|P11362-21|FGFR1;ENSG00000077782|ENST00000447712|FGFR1;nc|ENSG00000077782|P11362-19|FGFR1;nc|ENSG00000077782|P11362-2|FGFR1;nc|ENSG00000077782|P11362-7|FGFR1;nc|ENSG00000077782|P11362-20|FGFR1;nc|ENSG00000077782|P11362-3|FGFR1;nc|ENSG00000077782|P11362-4|FGFR1;nc|ENSG00000077782|P11362-14|FGFR1;nc|ENSG00000077782|P11362-6|FGFR1;nc|ENSG00000077782|P11362-5|FGFR1;ENST00000526570.5_1_8:38271148-38285795:-|nuORF;ENST00000531196.5_1_8:38271148-38271684:-|nuORF	nc|ENSG00000077782|P11362-21|FGFR1	nc|ENSG00000077782|P11362-21|FGFR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.27142333984375	2	491.229822	980.445091	-0.020607	-1.0123E-05	-0.27191	-0.00013357	-0.29252	-0.00014369	491.22957420569725	53.899	0.41735	54.313	54.077	54.495	0.4139					17	9	2	0	0	0	0.4196	1	5436	5436		11.511	3.8207	1	156890			55016	1386	36709	36724	62305	62305					-0.045914059613664904
SNQLLGRKVFP	11	Unmodified	_SNQLLGRKVFP_					0	0	0		ENST00000578001.1_1_17:27182052-27185217:+|nuORF;nc|ENSG00000132591|O75616-2|ERAL1;ENSG00000132591|ENST00000254928|ERAL1	ENST00000578001.1_1_17:27182052-27185217:+|nuORF	ENST00000578001.1_1_17:27182052-27185217:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.27655029296875	3	420.247062	1257.71936	-0.39505	-0.00016602	1.337	0.00056187	0.94195	0.00039585	420.2476950332521	46.087	0.49104	46.008	45.799	46.29	-0.079006					17	14	2	0	0	0	0.75121	1	3379	3379		21.78	0.94327	1	70403			55017	3807	36710	36725	62306	62306					0.10080456588434572
SNQLMRLP	8	Unmodified	_SNQLMRLP_					0	0	0		ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.30865478515625	2	479.760569	957.506586	0.15521	7.4463E-05	-4.1723	-0.0020017	-4.0171	-0.0019273	479.75844312218175	46.75	0.55109	46.737	46.438	46.989	-0.013821					23	14	2	0	0	0	0.4196	1	3787	3787		31.955	8.9124	1	168510			55018	4971	36711	36726	62307	62307					0.02613247256908835
SNQNQLPSLVE	11	Unmodified	_SNQNQLPSLVE_					0	0	0		ENST00000240123.11_2_8:22432596-22432776:+|nuORF	ENST00000240123.11_2_8:22432596-22432776:+|nuORF	ENST00000240123.11_2_8:22432596-22432776:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	614.81689453125	2	614.812042	1227.60953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.87	1	67.004	66.504	67.504	0.13326								0	0	0	0.56276	1	5948	5948		49.536	10.782	1				55019	9247	36712	36727	62308	62308					0.0048298645856448275
SNQTAPSLN	9	Unmodified	_SNQTAPSLN_					0	0	0		nc|ENSG00000141577|Q9UPN4-3|CEP131;ENSG00000141577|ENST00000450824|CEP131;nc|ENSG00000141577|Q9UPN4|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	nc|ENSG00000141577|Q9UPN4-3|CEP131	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.2271728515625	2	466.227613	930.440674	-1.4406	-0.00067164	-4.1916	-0.0019543	-5.6322	-0.0026259	466.2262668176346	79.922	0.73407	80.021	79.725	80.459	0.098701					56	25	3	0	0	0	0.64555	1	7544	7544		44.377	5.1244	1	152690			55020	4515	36713	36728	62309	62309					-0.02732870384272701
SNQVCRSGP	9	Unmodified	_SNQVCRSGP_					0	0	0		ENSG00000160613|ENST00000320934|PCSK7	ENSG00000160613|ENST00000320934|PCSK7	ENSG00000160613|ENST00000320934|PCSK7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	474.2242126464844	2	474.221808	946.429063	0.49089	0.00023279	2.5497	0.0012091	3.0406	0.0014419	474.2228867992903	68.938	0.71165	69.067	68.79	69.502	0.12838					54	30	3	0	0	0	0.73802	1	6243	6243		37.812	1.3648	1	323050			55021	5597	36714	36729	62310	62310					-0.046293906792584494
SNRAARILGI	10	Unmodified	_SNRAARILGI_					0	0	0			REV__ENSG00000112238|ENST00000369215|PRDM13	REV__ENSG00000112238|ENST00000369215|PRDM13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.8215942382812	2	535.825089	1069.63563	-1.2875	-0.00068988	-4.1483	-0.0022227	-5.4358	-0.0029126	535.8227210887089	51.077	1.5601	51.077	50.101	51.661	0					63	40	2	0	0	0	0.86225	1	4096	4096		32.751	0.79567	1	293180	+		55022	17931	36715	36730	62311	62311					0.10359345211372784
SNRFKRLFF	9	Unmodified	_SNRFKRLFF_					0	0	0			REV__ENSG00000114923|ENST00000358055|SLC4A3	REV__ENSG00000114923|ENST00000358055|SLC4A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5653076171875	3	405.564614	1213.67201	-0.18889	-7.6609E-05	-0.19199	-7.7864E-05	-0.38088	-0.00015447	405.56454193818195	61.137	0.35434	61.124	60.82	61.174	-0.012199					23	15	2	0	0	0	0.7932	1	5657	5657		23.523	3.2077	1	157390	+		55023	18074	36716	36731	62312	62312					0.07372222108074311
SNRFKRLFF	9	Unmodified	_SNRFKRLFF_					0	0	0			REV__ENSG00000114923|ENST00000358055|SLC4A3	REV__ENSG00000114923|ENST00000358055|SLC4A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.56451416015625	3	405.564614	1213.67201	0.39528	0.00016031	-0.0086202	-3.4961E-06	0.38666	0.00015681	405.56450530615757	63.272	1.3532	63.394	62.754	64.107	0.12253					138	58	3	0	0	0	0.7932	1	5546	5546		17.468	0	1	242080	+		55024	18074	36716	36731	62313	62313					0.07372222108074311
SNRLFRWE	8	Unmodified	_SNRLFRWE_					0	0	0			REV__ENSG00000141564|ENST00000306801|RPTOR	REV__ENSG00000141564|ENST00000306801|RPTOR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.28759765625	2	554.28834	1106.56213	-1.3781	-0.00076384	1.3053	0.00072351	-0.072766	-4.0333E-05	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.88601	1	2347	2347		34.173	2.6427	1	328550	+		55025	19697	36717	36732	62314	62314					0.013107967688711142
SNRLKLIPLGV	11	Unmodified	_SNRLKLIPLGV_					0	0	0		nc|ENSG00000169783|Q96FE5-2|LINGO1;ENSG00000169783|ENST00000355300|LINGO1	nc|ENSG00000169783|Q96FE5-2|LINGO1	nc|ENSG00000169783|Q96FE5-2|LINGO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.92950439453125	3	403.92744	1208.76049	2.3249	0.0009391	3.1739	0.001282	5.4989	0.0022211	403.9286347237818	47.212	4.4078	47.208	45.793	50.201	-0.0041618					292	114	4	0	0	0	0.70278	7	3842	3736;3748;3759;3842;3852;3861;3894		31.068	13.558	1	2948200			55026	6524	36718	36733	62315;62316;62317;62318;62319;62320;62321	62318					0.16446217627867554
SNRLKLIPLGV	11	Unmodified	_SNRLKLIPLGV_					0	0	0		nc|ENSG00000169783|Q96FE5-2|LINGO1;ENSG00000169783|ENST00000355300|LINGO1	nc|ENSG00000169783|Q96FE5-2|LINGO1	nc|ENSG00000169783|Q96FE5-2|LINGO1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	403.92744	1208.76049	0.31301	0.00012643	5.9896	0.0024194	6.3026	0.0025458	403.92976073677227	46.928	0.79734	47.4	47.099	47.896	0.47139	0.25235	-7.4564E-05	NaN	31.068	30	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	435490			55027	6524	36718	36733							0.16446217627867554
SNRPGRRLRTL	11	Unmodified	_SNRPGRRLRTL_					0	0	0			REV__ENST00000245222.8_1_19:49132432-49132576:+|nuORF	REV__ENST00000245222.8_1_19:49132432-49132576:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.60162353515625	3	442.600609	1324.78	2.7378	0.0012118	-1.6376	-0.00072482	1.1002	0.00048695	442.5997945412009	103.8	1.4388	103.76	103.37	104.81	-0.043755					90	34	4	0	0	0	0.73647	1	11370	11370		25.068	1.6899	1	569000	+		55028	24251	36719	36734	62322	62322					0.13059986691359882
SNRRLLPN	8	Unmodified	_SNRRLLPN_					0	0	0		ENST00000333646.10_2_X:70360540-70362186:+|nuORF	ENST00000333646.10_2_X:70360540-70362186:+|nuORF	ENST00000333646.10_2_X:70360540-70362186:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2866516113281	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.507	1	71.637	71.137	72.137	0.1301								0	0	0	0.29264	1	6521	6521		29.15	0	1				55029	10138	36720	36735	62323	62323					0.06602814114478406
SNRRTDKHRGS	11	Unmodified	_SNRRTDKHRGS_					0	0	0			REV__nc|ENSG00000042062|Q96MK2-2|RIPOR3	REV__nc|ENSG00000042062|Q96MK2-2|RIPOR3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.56536865234375	3	438.564224	1312.67084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.226	1	62.334	61.834	62.834	0.10743								0	0	0	0.56276	1	5421	5421		25.892	0.76573	1		+		55030	16325	36721	36736	62324	62324					0.027013560012164817
SNRRVVVVIVV	11	Unmodified	_SNRRVVVVIVV_					0	0	0		ENSG00000198121|ENST00000683809|LPAR1;nc|ENSG00000198121|Q92633-2|LPAR1	ENSG00000198121|ENST00000683809|LPAR1	ENSG00000198121|ENST00000683809|LPAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9328918457031	3	413.934706	1238.78229	-1.8924	-0.00078334	-2.7536	-0.0011398	-4.6461	-0.0019232	413.93347709098015	44.87	2.8248	44.882	43.566	46.391	0.012058					191	71	4	0	0	0	0.72374	1	3269	3269		27.644	3.4121	1	675440			55031	8240	36722	36737	62325	62325					0.1724502237645993
SNRTAKLHVLL	11	Unmodified	_SNRTAKLHVLL_					0	0	0			REV__ENSG00000087365|ENST00000322535|SF3B2	REV__ENSG00000087365|ENST00000322535|SF3B2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.379150390625	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	120	1	119.88	119.38	120.38	-0.12102								0	0	0	0.56276	1	12970	12970		19.997	5.1319	1		+		55032	16934	36723	36738	62326	62326					0.13056145479754377
SNRTAKLHVLL	11	Unmodified	_SNRTAKLHVLL_					0	0	0			REV__ENSG00000087365|ENST00000322535|SF3B2	REV__ENSG00000087365|ENST00000322535|SF3B2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3794555664062	2	626.380229	1250.7459	2.0982	0.0013142	-3.0036	-0.0018814	-0.90548	-0.00056717	626.3782628803294	105.51	2.7267	105.67	104.93	107.65	0.15583					187	94	2	0	0	0	0.6396	1	12860	12860		23.523	0.94304	1	2939000	+		55033	16934	36723	36738	62327	62327					0.13056145479754377
SNRTALPKA	9	Unmodified	_SNRTALPKA_					0	0	0			REV__ENSG00000178691|ENST00000322652|SUZ12	REV__ENSG00000178691|ENST00000322652|SUZ12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.278076171875	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.77696	1	8537	8537		31.53	1.0262	1	6441000	+		55034	22289	36724	36739	62328	62328					0.06031992020314192
SNSGCADQG	9	Unmodified	_SNSGCADQG_					0	0	0			REV__nc|ENSG00000171105|P06213-2|INSR;REV__ENSG00000140443|ENST00000650285|IGF1R	REV__ENSG00000140443|ENST00000650285|IGF1R	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.1839294433594	2	419.653424	837.292295	0.088133	3.6985E-05	-2.3141	-0.00097114	-2.226	-0.00093415	419.65246165867796	31.481	0.38473	31.499	31.202	31.587	0.01836					11	8	2	0	0	0	0.20789	1	1670	1670		19.104	5.6495	1	9801.2	+		55035	19615;21712	36725	36740	62329	62329					-0.13285924629633428
SNSGCADQG	9	Unmodified	_SNSGCADQG_					0	0	0			REV__nc|ENSG00000171105|P06213-2|INSR;REV__ENSG00000140443|ENST00000650285|IGF1R	REV__ENSG00000140443|ENST00000650285|IGF1R	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	419.653424	837.292295	-0.33199	-0.00013932	-4.1028	-0.0017217	-4.4348	-0.0018611	419.65239012507936	31.499	0.278	31.448	31.289	31.567	-0.051031	-0.025381	-0.0013156	NaN	19.104	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20710	+		55036	19615;21712	36725	36740							-0.13285924629633428
SNSLSKGY	8	Unmodified	_SNSLSKGY_					0	0	0			REV__nc|ENSG00000058091|O94921-3|CDK14	REV__nc|ENSG00000058091|O94921-3|CDK14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3027648925781	2	428.213975	854.413397	0.28239	0.00012092	-2.0199	-0.00086497	-1.7376	-0.00074404	428.2136984379182	69.2	0.12695	69.584	69.521	69.648	0.38416					4	2	2	0	0	0	0.4196	1	7637	7637		30.504	21.033	1	21741	+		55037	16433	36726	36741	62330	62330					-0.01963353924668354
SNSPVPNH	8	Unmodified	_SNSPVPNH_					0	0	0		ENSG00000204406|ENST00000642680|MBD5;nc|ENSG00000204406|Q9P267|MBD5;nc|ENSG00000204406|Q9P267-2|MBD5	ENSG00000204406|ENST00000642680|MBD5	ENSG00000204406|ENST00000642680|MBD5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747497558594	2	426.203941	850.39333	0.38017	0.00016203	-0.18144	-7.7331E-05	0.19873	8.4698E-05	426.20200724524415	37.619	0.19449	37.932	37.786	37.98	0.31312					9	4	3	0	0	0	0.4196	1	3025	3025		38.806	0	1	38851			55038	8441	36727	36742	62331	62331					-0.037851048646189156
SNSTGAEVVLY	11	Unmodified	_SNSTGAEVVLY_					0	0	0		ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENSG00000141452|ENST00000269221|RMC1	ENST00000589215.5_1_18:21087981-21111645:+|nuORF	ENST00000589215.5_1_18:21087981-21111645:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.2864379882812	2	570.282586	1138.55062	-0.31121	-0.00017748	3.4684	0.001978	3.1572	0.0018005	570.284523356633	81.315	0.72765	81.736	81.309	82.036	0.4215					42	17	3	0	0	0	0.57736	1	9358	9358		46.457	0.50483	1	364930			55039	4503	36728	36743	62332	62332					-0.013114898357571292
SNTAMESPTE	10	Unmodified	_SNTAMESPTE_					0	0	0			REV__ENSG00000146216|ENST00000259750|TTBK1	REV__ENSG00000146216|ENST00000259750|TTBK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.717529296875	2	533.721504	1065.42845	0.24702	0.00013184	-1.8054	-0.0009636	-1.5584	-0.00083176	533.7202040736337	74.375	0.47954	74.331	74.15	74.629	-0.043877					25	16	2	0	0	0	0.73395	1	7307	7307		42.864	2.0861	1	112730	+		55040	19994	36729	36744	62333	62333					-0.10164274909652704
SNTAPETVPSH	11	Unmodified	_SNTAPETVPSH_					0	0	0		ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.275146484375	2	570.27001	1138.52547	-0.031427	-1.7922E-05	3.1959	0.0018225	3.1644	0.0018046	570.2720150954638	57.766	1.2071	57.8	57.475	58.682	0.033905					78	36	5	0	0	0	0.68532	1	5309	5309		33.922	1.9668	1	281920			55041	2738	36730	36745	62334	62334					-0.03825544638334577
SNTELYQN	8	Unmodified	_SNTELYQN_					0	0	0			REV__ENST00000471669.1_1_9:4646457-4666250:-|nuORF	REV__ENST00000471669.1_1_9:4646457-4666250:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7187194824219	2	484.719621	967.42469	-1.6647	-0.00080693	-1.1726	-0.0005684	-2.8374	-0.0013753	484.71886476647086	100.24	1.3318	100.42	99.843	101.18	0.17199					60	30	3	0	0	0	0.89962	1	10419	10419		38.806	5.9937	1	492530	+		55042	17623	36731	36746	62335	62335					-0.06032576621191765
SNTLGVLLCV	10	Unmodified	_SNTLGVLLCV_					0	0	0			REV__ENST00000445935.5_2_21:47737957-47742843:-|nuORF	REV__ENST00000445935.5_2_21:47737957-47742843:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.78460693359375	2	509.78371	1017.55287	5.0413	0.00257	-1.9756	-0.0010071	3.0657	0.0015628	509.78224354563946	106.8	0.60811	106.95	106.64	107.25	0.14929					48	21	3	0	0	0	0.74274	1	13032	13032		42.396	3.59	1	378320	+		55043	26799	36732	36747	62336	62336					0.04479267368344608
SNTPSVLMASY	11	Unmodified	_SNTPSVLMASY_					0	0	0			REV__ENSG00000106771|ENST00000374586|TMEM245	REV__ENSG00000106771|ENST00000374586|TMEM245	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.2386474609375	2	585.278989	1168.54342	-1.1209	-0.00065602	0.12727	7.449E-05	-0.9936	-0.00058153	585.2787433093197	44.885	0.37032	45.729	45.501	45.872	0.84438					13	8	2	0	0	0	0.16675	1	4150	4150		56.434	14.038	1	310400	+		55044	17627	36733	36748	62337	62337					-0.034105457078339896
SNTTNDISI	9	Unmodified	_SNTTNDISI_					0	0	0			REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.7356872558594	2	482.732729	963.450904	0.026084	1.2592E-05	3.877	0.0018716	3.9031	0.0018842	482.73459023192976	81.274	0.64876	81.695	81.309	81.957	0.4215					33	15	3	0	0	0	0.51592	1	9370	9370		51.193	5.2407	1	318090	+		55045	20516	36734	36749	62338	62338					-0.032283074497058806
SNTTNDISI	9	Unmodified	_SNTTNDISI_					0	0	0			REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	482.732729	963.450904	-0.42484	-0.00020509	4.3663	0.0021078	3.9415	0.0019027	482.73480489458416	81.168	0.69262	81.668	81.379	82.072	0.49967	-0.013764	0.00021228	NaN	51.193	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	300100	+		55046	20516	36734	36749							-0.032283074497058806
SNTVKRHK	8	Unmodified	_SNTVKRHK_					0	0	0			REV__nc|ENSG00000144857|Q9BWV1|BOC	REV__nc|ENSG00000144857|Q9BWV1|BOC	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.28704833984375	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.757	1	72.887	72.387	73.387	0.13064								0	0	0	0.29245	1	6686	6686		30.504	3.7075	1		+		55047	29908	36735	36750	62339	62339					0.06602814114467037
SNTVKRHK	8	Unmodified	_SNTVKRHK_					0	0	0			REV__nc|ENSG00000144857|Q9BWV1|BOC	REV__nc|ENSG00000144857|Q9BWV1|BOC	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.28448486328125	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.78	1	74.912	74.412	75.412	0.13208								0	0	0	0.30305	1	6931	6931		42.396	8.2236	1		+		55048	29908	36735	36750	62340	62340					0.06602814114467037
SNVAITSN	8	Unmodified	_SNVAITSN_					0	0	0			REV__chr1:81981150-81981808|38|12.34|0.54|4.51|+|ENST00000674489|ADGRL2,ADGRL2	REV__chr1:81981150-81981808|38|12.34|0.54|4.51|+|ENST00000674489|ADGRL2,ADGRL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.2090148925781	2	403.20615	804.397747	2.9266	0.00118	4.1333	0.0016666	7.0599	0.0028466	403.2077473802554	85.716	2.0213	85.774	85.282	87.304	0.057899					111	46	4	0	0	0	0.88185	1	8699	8699		32.812	0.85756	1	1450600	+		55049	15456	36736	36751	62341	62341					-0.012276404417093545
SNVFSQIH	8	Unmodified	_SNVFSQIH_					0	0	0		nc|ENSG00000033122|Q96NW7-2|LRRC7;chr1:69716218-69760191|13|29.0|0.65|5.48|+|ENST00000310961|LRRC7,LRRC7;nc|ENSG00000033122|Q96NW7|LRRC7;ENSG00000033122|ENST00000651989|LRRC7	nc|ENSG00000033122|Q96NW7-2|LRRC7	nc|ENSG00000033122|Q96NW7-2|LRRC7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.5892639160156	2	466.235242	930.45593	-0.18972	-8.8454E-05	1.8481	0.00086167	1.6584	0.00077321	466.23576176388303	55.751	0.56334	56.152	55.866	56.429	0.40101					32	13	3	0	0	0	0.4196	1	5749	5749		45.952	0	1	893840			55050	56	36737	36752	62342	62342					-0.012079587964194616
SNVGLWGHQ	9	Unmodified	_SNVGLWGHQ_					0	0	0		ENSG00000184560|ENST00000333870|SPEM2	ENSG00000184560|ENST00000333870|SPEM2	ENSG00000184560|ENST00000333870|SPEM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.3055725097656	2	499.246141	996.477728	2.4628	0.0012296	-1.8663	-0.00093176	0.5965	0.0002978	499.24524615430806	26.094	0.25843	25.663	25.525	25.784	-0.4311					8	5	3	0	0	0	0.20789	1	1396	1396		31.53	4.8369	1	31053			55051	7621	36738	36753	62343	62343					-0.02065154047852502
SNVHLRGT	8	Unmodified	_SNVHLRGT_					0	0	0		ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2412414550781	2	442.240858	882.467164	0.098186	4.3422E-05	0.19163	8.4747E-05	0.28982	0.00012817	442.2407808543281	79.076	2.7507	79.022	77.456	80.207	-0.053558					222	93	4	0	0	0	0.87479	1	7827	7827		30.504	6.3009	1	344800			55052	4289	36739	36754	62344	62344					0.021228632976999506
SNVHLRGT	8	Unmodified	_SNVHLRGT_					0	0	0		ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2406311035156	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.87479	1	8115	8115		30.504	5.0535	1	1238700			55053	4289	36739	36754	62345	62345					0.021228632976999506
SNVHLRGT	8	Unmodified	_SNVHLRGT_					0	0	0		ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2408752441406	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.90523	1	8008	8008		40.778	3.6191	1	1244000			55054	4289	36739	36754	62346	62346					0.021228632976999506
SNVHLRGT	8	Unmodified	_SNVHLRGT_					0	0	0		ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2409973144531	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.89679	3	7980	7687;7699;7980		44.117	13.613	1	1219900			55055	4289	36739	36754	62347;62348;62349	62349					0.021228632976999506
SNVHLRGT	8	Unmodified	_SNVHLRGT_					0	0	0		ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24066162109375	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.89043	1	7769	7769		35.618	5.1146	1	1094000			55056	4289	36739	36754	62350	62350					0.021228632976999506
SNVIFGKGCES	11	Carbamidomethyl (C)	_SNVIFGKGC(Carbamidomethyl (C))ES_	SNVIFGKGC(1)ES		SNVIFGKGC(44)ES		0	1	0			REV__ENSG00000256087|ENST00000221315|ZNF432	REV__ENSG00000256087|ENST00000221315|ZNF432	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.2816162109375	2	599.282063	1196.54957	-2.1965	-0.0013164	1.3416	0.00080399	-0.85496	-0.00051236	599.2827110130493	41.819	1.0357	41.823	41.461	42.497	0.003418					55	24	3	0	0	0	0.60687	1	3147	3147		43.651	12.121	1	1614800	+		55057	23904	36740	36755	62351	62351	291				-0.04084027476301344
SNVIKKLSQ	9	Unmodified	_SNVIKKLSQ_					0	0	0			REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.80767822265625	2	508.808574	1015.60259	-0.95319	-0.00048499	-0.53133	-0.00027035	-1.4845	-0.00075534	508.8082107511822	83.728	2.644	83.728	82.933	85.577	0					147	63	5	0	0	0	0.7932	1	7859	7859		26.693	2.4902	1	4920100	+		55058	21372	36741	36756	62352	62352					0.09541718368666352
SNVIKKLSQ	9	Unmodified	_SNVIKKLSQ_					0	0	0			REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.8076171875	2	508.808574	1015.60259	0.84861	0.00043178	-3.1233	-0.0015892	-2.2747	-0.0011574	508.8072597473503	83.541	2.7911	83.472	82.015	84.806	-0.069313					129	64	3	0	0	0	0.44421	1	8494	8494		54.776	13.998	1	2497800	+		55059	21372	36741	36756	62353	62353					0.09541718368666352
SNVIKKLSQ	9	Unmodified	_SNVIKKLSQ_					0	0	0			REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.8077087402344	2	508.808574	1015.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.338	1	83.397	82.897	83.897	0.05925								0	0	0	0.31437	1	8375	8375		25.574	1.3713	1		+		55060	21372	36741	36756	62354	62354					0.09541718368666352
SNVIKKLSQ	9	Unmodified	_SNVIKKLSQ_					0	0	0			REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.8080139160156	2	508.808574	1015.60259	-0.40009	-0.00020357	-1.3872	-0.00070582	-1.7873	-0.00090939	508.80782145253374	83.116	1.7458	83.281	82.603	84.348	0.1651					72	40	2	0	0	0	0.67345	2	8065	8027;8065		42.396	5.023	1	4136400	+		55061	21372	36741	36756	62355;62356	62356					0.09541718368666352
SNVIKKLSQ	9	Unmodified	_SNVIKKLSQ_					0	0	0			REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.8061218261719	2	508.808574	1015.60259	-0.38303	-0.00019489	-3.6518	-0.001858	-4.0348	-0.0020529	508.80774374343616	89.543	1.6067	89.755	89.176	90.782	0.21271					125	37	6	0	0	0	0.7932	1	8946	8946		25.574	2.0514	1	1485200	+		55062	21372	36741	36756	62357	62357					0.09541718368666352
SNVIKKLSQ	9	Unmodified	_SNVIKKLSQ_					0	0	0			REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	REV__ENST00000527186.1_1_11:118277587-118279810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.8075866699219	2	508.808574	1015.60259	-1.4188	-0.00072192	-0.25381	-0.00012914	-1.6726	-0.00085106	508.8083690833738	83.198	1.9743	83.336	82.638	84.612	0.13811					103	45	4	0	0	0	0.76764	1	8007	8007		34.173	5.023	1	3643200	+		55063	21372	36741	36756	62358	62358					0.09541718368666352
SNVITFLL	8	Unmodified	_SNVITFLL_					0	0	0			REV__ENST00000490299.5_1_1:213277858-213302879:+|nuORF	REV__ENST00000490299.5_1_1:213277858-213302879:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.7688903808594	2	453.768386	905.522219	-0.75162	-0.00034106	0.35166	0.00015957	-0.39996	-0.00018149	453.76840353344477	49.292	1.0608	49.268	48.883	49.943	-0.024029					38	23	2	0	0	0	0.60357	1	4216	4216		71.296	2.5089	1	146330	+		55064	25541	36742	36757	62359	62359					0.06567857045627079
SNVKLKKP	8	Unmodified	_SNVKLKKP_					0	0	0			REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7889099121094	2	457.295102	912.575651	-0.96744	-0.0004424	-1.1353	-0.00051915	-2.1027	-0.00096155	457.2948545981617	44.624	2.8858	44.59	43.83	46.716	-0.03347					122	67	3	0	0	0	0.4196	1	3472	3472		23.042	0	1	108460	+		55065	15561	36743	36758	62360	62360					0.11586654548136721
SNVKLKKPSQH	11	Unmodified	_SNVKLKKPSQH_					0	0	0			REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3707885742188	2	633.369861	1264.72517	-0.11908	-7.5423E-05	-0.90029	-0.00057022	-1.0194	-0.00064564	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.60687	1	9537	9537		43.651	4.398	1	2722900	+		55066	15561	36744	36759	62361	62361					0.10339555100085818
SNVKLKKPSQH	11	Unmodified	_SNVKLKKPSQH_					0	0	0			REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	REV__nc|ENSG00000151835|Q9NZJ4-2|SACS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3687744140625	2	633.369861	1264.72517	1.4675	0.00092945	-2.7221	-0.0017241	-1.2546	-0.00079462	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.71921	1	9690	9690		31.634	0	1	5460600	+		55067	15561	36744	36759	62362	62362					0.10339555100085818
SNVKPVRN	8	Unmodified	_SNVKPVRN_					0	0	0		L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|123|2|sense	L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|123|2|sense	L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|123|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2639465332031	2	457.264333	912.514114	-1.2803	-0.00058543	1.4305	0.00065413	0.15023	6.8693E-05	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.84341	3	7329	7316;7329;7500		40.778	11.629	1	812040			55068	14531	36745	36760	62363;62364;62365	62364					0.05435722848858404
SNVKPVRN	8	Unmodified	_SNVKPVRN_					0	0	0		L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|123|2|sense	L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|123|2|sense	L1MA1_dup2764|chrX:115931094-115936482:-|1.9832524310055424|0.2242833538996142|3.14|63.0|123|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2634582519531	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.88185	1	7457	7457		32.812	0	1	1032000			55069	14531	36745	36760	62366	62366					0.05435722848858404
SNVLALLP	8	Unmodified	_SNVLALLP_					0	0	0			REV__ENST00000496363.5_1_1:161011186-161011497:-|nuORF	REV__ENST00000496363.5_1_1:161011186-161011497:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2701416015625	2	413.755278	825.496004	0.013418	5.5518E-06	4.2427	0.0017555	4.2562	0.001761	413.75691574550143	48.182	0.50913	48.173	48.005	48.514	-0.0093269					14	11	2	0	0	0	0.4196	1	3964	3964		31.955	18.18	1	31574	+		55070	27750	36746	36761	62367	62367					0.07627587874151232
SNVLGATSG	9	Unmodified	_SNVLGATSG_					0	0	0		ENSG00000176542|ENST00000316407|USF3	ENSG00000176542|ENST00000316407|USF3	ENSG00000176542|ENST00000316407|USF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.2091979980469	2	403.20615	804.397747	2.9266	0.00118	4.1333	0.0016666	7.0599	0.0028466	403.2077473802554	85.716	2.0213	85.774	85.282	87.304	0.057899					111	46	4	0	0	0	0.67345	1	8687	8687		42.396	1.8235	1	1450600			55071	7087	36747	36762	62368	62368					-0.012276404417093545
SNVLPLLL	8	Unmodified	_SNVLPLLL_					0	0	0		nc|ENSG00000155229|Q96T76-8|MMS19;nc|ENSG00000155229|Q96T76-9|MMS19;ENSG00000155229|ENST00000438925|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516174316406	2	434.778754	867.542954	-0.16722	-7.2703E-05	3.2645	0.0014193	3.0973	0.0013466	434.78023984746966	76.84	0.36474	76.889	76.625	76.99	0.049194					23	14	2	0	0	0	0.4196	1	7418	7418		26.796	0	1	56943			55072	15006	36748	36763	62369	62369					0.10388447425293634
SNVLPLLL	8	Unmodified	_SNVLPLLL_					0	0	0		nc|ENSG00000155229|Q96T76-8|MMS19;nc|ENSG00000155229|Q96T76-9|MMS19;ENSG00000155229|ENST00000438925|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.778754	867.542954	-1.5765	-0.00068544	4.9502	0.0021522	3.3736	0.0014668	434.7808039068567	76.597	0.58667	76.721	76.218	76.805	0.12485	-0.13417	0.00050897	NaN	31.955	39	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135130			55073	15006	36748	36763							0.10388447425293634
SNVLPLLL	8	Unmodified	_SNVLPLLL_					0	0	0		nc|ENSG00000155229|Q96T76-8|MMS19;nc|ENSG00000155229|Q96T76-9|MMS19;ENSG00000155229|ENST00000438925|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	434.778754	867.542954	-1.42	-0.00061739	4.5523	0.0019792	3.1323	0.0013618	434.78076187522834	76.867	0.90662	76.956	76.161	77.068	0.089363	0.1007	0.000163	NaN	31.955	53	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	231050			55074	15006	36748	36763							0.10388447425293634
SNVPILIL	8	Unmodified	_SNVPILIL_					0	0	0		nc|ENSG00000079332|Q9NR31-2|SAR1A;ENSG00000079332|ENST00000373241|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7795715332031	2	434.778754	867.542954	0.023581	1.0252E-05	2.6379	0.0011469	2.6615	0.0011571	434.7797629333649	48.108	2.6391	48.098	47.574	50.213	-0.0093269					205	68	4	0	0	0	0.86288	1	3899	3899		26.796	5.0938	1	2315200			55075	1417	36749	36764	62370	62370					0.10388447425293634
SNVPILIL	8	Unmodified	_SNVPILIL_					0	0	0		nc|ENSG00000079332|Q9NR31-2|SAR1A;ENSG00000079332|ENST00000373241|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7795104980469	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.961	1	57.947	57.447	58.447	-0.013641								0	0	0	0.30252	1	5259	5259		19.36	1.0356	1				55076	1417	36749	36764	62371	62371					0.10388447425293634
SNVPILIL	8	Unmodified	_SNVPILIL_					0	0	0		nc|ENSG00000079332|Q9NR31-2|SAR1A;ENSG00000079332|ENST00000373241|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.779052734375	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.721	1	57.691	57.191	58.191	-0.029865								0	0	0	0.29498	1	5336	5336		26.796	1.3459	1				55077	1417	36749	36764	62372	62372					0.10388447425293634
SNVPILIL	8	Unmodified	_SNVPILIL_					0	0	0		nc|ENSG00000079332|Q9NR31-2|SAR1A;ENSG00000079332|ENST00000373241|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7792663574219	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.84341	2	3060	2992;3060		29.15	2.3535	1	2537300			55078	1417	36749	36764	62373;62374	62374					0.10388447425293634
SNVPKLKP	8	Unmodified	_SNVPKLKP_					0	0	0			REV__nc|ENSG00000165863|Q8WW14-3|SPMIP5	REV__nc|ENSG00000165863|Q8WW14-3|SPMIP5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7881164550781	2	441.774003	881.533452	0.31946	0.00014113	-0.83501	-0.00036888	-0.51555	-0.00022775	441.7745682722133	37.763	0.18494	38.285	38.21	38.395	0.52235					5	4	2	0	0	0	0.4196	1	3067	3067		25.45	17.76	1	416070	+		55079	21228	36750	36765	62375	62375					0.08794679139759864
SNVTFRNV	8	Unmodified	_SNVTFRNV_					0	0	0			REV__nc|ENSG00000162843|B1ANS9-2|WDR64	REV__nc|ENSG00000162843|B1ANS9-2|WDR64	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.7488098144531	2	468.748516	935.482479	-2.1052	-0.00098682	2.1156	0.00099169	0.010372	4.8619E-06	468.749387678244	39.292	0.71391	39.303	39.018	39.732	0.011173					33	16	3	0	0	0	0.88185	1	2740	2740		32.812	0.85756	1	155110	+		55080	20854	36751	36766	62376	62376					0.012157300948956618
SNVTRLLLT	9	Unmodified	_SNVTRLLLT_					0	0	0		ENSG00000128536|ENST00000317716|CDHR3	ENSG00000128536|ENST00000317716|CDHR3	ENSG00000128536|ENST00000317716|CDHR3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.80712890625	2	508.808574	1015.60259	-0.85493	-0.00043499	-0.55163	-0.00028067	-1.4066	-0.00071567	508.8081854694424	90.498	1.1947	90.498	89.91	91.105	0					75	27	4	0	0	0	0.7932	1	8792	8792		20.947	4.4738	1	968460			55081	3547	36752	36767	62377	62377					0.09541718368666352
SNWARRSR	8	Unmodified	_SNWARRSR_					0	0	0			REV__ENST00000579584.5_1_17:31203841-31203898:-|nuORF	REV__ENST00000579584.5_1_17:31203841-31203898:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2401733398438	2	516.775931	1031.53731	0.37479	0.00019368	2.1771	0.0011251	2.5519	0.0013187	516.7769135133703	32.546	0.60094	32.672	32.417	33.018	0.12643					26	13	3	0	0	0	0.4196	1	2258	2258		20.947	0	1	309760	+		55082	29032	36753	36768	62378	62378					0.022801616861897855
SNWNKLNM	8	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))SNWNKLNM(Oxidation (M))_		SNWNKLNM(1)		SNWNKLNM(53)	1	0	1			REV__ENST00000483551.6_1_15:69080170-69080224:-|nuORF	REV__ENST00000483551.6_1_15:69080170-69080224:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.745361328125	2	532.745116	1063.47568	0.86712	0.00046195	-1.7528	-0.0009338	-0.88568	-0.00047184	532.7443557301632	50.88	0.53133	51.632	51.366	51.898	0.75174					28	12	3	0	0	0	0.93786	1	5044	5044		53.351	17.733	1	360190	+		55083	27492	36754	36769	62379	62379					-0.05351950847966691
SNWQFFATKM	10	Unmodified	_SNWQFFATKM_					0	0	0			REV__ENST00000301744.5_1_16:3483254-3483488:-|nuORF	REV__ENST00000301744.5_1_16:3483254-3483488:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.2979125976562	2	630.297516	1258.58048	1.2871	0.00081123	-2.1773	-0.0013724	-0.89029	-0.00056115	630.2960473873329	23.81	0.6923	23.863	23.602	24.294	0.05291					51	30	2	0	0	0	0.8545	1	789	789		36.447	2.2742	1	159760	+		55084	24770	36755	36770	62380	62380					-0.03846829371423155
SNYEVIMKS	9	Unmodified	_SNYEVIMKS_					0	0	0		ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.292724609375	2	535.762975	1069.5114	-2.0831	-0.001116	-1.1654	-0.00062435	-3.2484	-0.0017404	535.7618600026577	42.285	0.48847	42.982	42.81	43.299	0.69754					17	11	2	0	0	0	0.20789	1	3749	3749		10.265	0	1	344520			55085	1203	36756	36771	62381	62381					-0.020579133909905067
SNYIHGRVT	9	Unmodified	_SNYIHGRVT_					0	0	0			REV__nc|ENSG00000005810|O75592-2|MYCBP2	REV__nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.0538330078125	2	523.772522	1045.53049	-0.47369	-0.0002481	-1.3141	-0.00068829	-1.7878	-0.00093639	523.7718156082836	60.016	0.4659	60.569	60.319	60.785	0.55323					16	12	2	0	0	0	0.20789	1	6353	6353		27.882	0	1	540110	+		55086	16090	36757	36772	62382	62382					0.009548040149411463
SNYKSNKFVK	10	Unmodified	_SNYKSNKFVK_					0	0	0			REV__CON__P00766	REV__CON__P00766	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	607.8277587890625	2	607.830037	1213.64552	0.47284	0.00028741	-2.1572	-0.0013112	-1.6843	-0.0010238	607.8286969893154	16.589	0.41359	15.99	15.74	16.154	-0.59873					13	8	3	0	0	0	0.76096	1	156	156		41.427	6.2746	1	125410	+	+	55087	15972	36758	36773	62383	62383					0.04724488426086282
SPAAPGPRLTG	11	Unmodified	_SPAAPGPRLTG_					0	0	0			REV__ENST00000355243.7_1_10:102587476-102587869:+|nuORF	REV__ENST00000355243.7_1_10:102587476-102587869:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2823486328125	2	512.282723	1022.55089	1.2711	0.00065114	-3.95	-0.0020235	-2.6789	-0.0013724	512.2806294768477	86.671	3.241	86.597	85.234	88.475	-0.074005					135	75	2	0	0	0	0.67041	1	8924	8924		36.318	2.1451	1	387010	+		55088	25373	36759	36774	62384	62384					0.040519746747463614
SPAAWVPR	8	Unmodified	_SPAAWVPR_					0	0	0			REV__ENST00000590923.5_2_19:10687899-10687995:-|nuORF	REV__ENST00000590923.5_2_19:10687899-10687995:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2406005859375	2	442.24287	882.471186	-1.4215	-0.00062863	-2.9443	-0.0013021	-4.3658	-0.0019307	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.89494	1	7992	7992		37.159	3.6435	1	1219900	+		55089	29192	36760	36775	62385	62385					0.025249527914184
SPADFVGL	8	Unmodified	_SPADFVGL_					0	0	0		nc|ENSG00000159788|O14924-5|RGS12;nc|ENSG00000159788|O14924-4|RGS12;ENSG00000159788|ENST00000336727|RGS12;ENST00000502947.1_1_4:3317897-3344786:+|nuORF	nc|ENSG00000159788|O14924-5|RGS12	nc|ENSG00000159788|O14924-5|RGS12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.2090148925781	2	403.208161	804.401769	2.9266	0.00118	-0.85515	-0.0003448	2.0714	0.00083522	403.2077473802554	85.716	2.0213	85.774	85.282	87.304	0.057899					111	46	4	0	0	0	0.86288	1	8725	8725		26.796	1.222	1	1450600			55090	5548	36761	36776	62386	62386					-0.008255509480022738
SPADKTNVKAA	11	Unmodified	_SPADKTNVKAA_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	551.2997436523438	2	551.29857	1100.58259	-1.4835	-0.00081786	1.4409	0.00079439	-0.042575	-2.3472E-05	551.299268794571	32.001	0.65455	32.001	31.801	32.456	0					57	24	3	0	0	0	0.41445	3	1564	1564;1581;1590		58.246	8.1033	1	214540			55091	7934	36762	36777	62387;62388;62389	62387					0.03631922638055585
SPADKTNVKAA	11	Unmodified	_SPADKTNVKAA_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.2962646484375	2	551.29857	1100.58259	0.28777	0.00015865	0.10482	5.7785E-05	0.39259	0.00021643	551.2986392570193	31.486	0.68246	31.593	31.334	32.016	0.10707					29	15	3	0	0	0	0.61824	1	2158	2158		42.338	9.5257	1	399300			55092	7934	36762	36777	62390	62390					0.03631922638055585
SPADVFVQW	9	Unmodified	_SPADVFVQW_					0	0	0		nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	nc|ENSG00000211899|P01871-1|IGHM	nc|ENSG00000211899|P01871-1|IGHM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.7572631835938	2	524.758549	1047.50255	-0.71519	-0.0003753	0.58101	0.00030489	-0.13418	-7.0411E-05	524.75876050811	87.335	0.8362	87.798	87.476	88.312	0.46312					42	19	3	0	0	0	0.073112	1	10280	10280		99.375	17.07	1	907870			55093	15242	36763	36778	62391	62391					-0.019305189651277033
SPADVFVQW	9	Unmodified	_SPADVFVQW_					0	0	0		nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	nc|ENSG00000211899|P01871-1|IGHM	nc|ENSG00000211899|P01871-1|IGHM	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	524.758549	1047.50255	0.8602	0.0004514	-0.9339	-0.00049007	-0.073696	-3.8673E-05	524.7580049293301	87.305	0.70889	87.752	87.347	88.056	0.44628	-0.023063	-0.00068328	NaN	99.375	39	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	810850			55094	15242	36763	36778							-0.019305189651277033
SPAICSYS	8	Unmodified	_SPAICSYS_					0	0	0		MERX_dup193|chr7:130520449-130521122:+|1.670141598206962|0.0678337748665423|4.62|61.0|1|1|sense	MERX_dup193|chr7:130520449-130521122:+|1.670141598206962|0.0678337748665423|4.62|61.0|1|1|sense	MERX_dup193|chr7:130520449-130521122:+|1.670141598206962|0.0678337748665423|4.62|61.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.1828308105469	2	414.183829	826.353105	0.3849	0.00015942	-3.0562	-0.0012658	-2.6712	-0.0011064	414.1829219864982	81.936	1.2856	82.362	81.962	83.248	0.42646					77	31	3	0	0	0	0.884	1	9459	9459		33.516	0	1	2282100			55095	14719	36764	36779	62392	62392					-0.06701787579413576
SPALPRLRVLL	11	Unmodified	_SPALPRLRVLL_					0	0	0		ENST00000174618.4_1_17:2289655-2289982:-|nuORF	ENST00000174618.4_1_17:2289655-2289982:-|nuORF	ENST00000174618.4_1_17:2289655-2289982:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7667541503906	3	412.271319	1233.79213	1.2717	0.00052428	3.7555	0.0015483	5.0272	0.0020726	412.2728186226103	36.68	1.1435	36.961	36.767	37.91	0.28173					57	27	3	0	0	0	0.1767	1	2869	2869		18.531	0.26896	1	165320			55096	9083	36765	36780	62393	62393					0.18458210381845674
SPALVLSQ	8	Unmodified	_SPALVLSQ_					0	0	0		ENST00000588534.1_1_19:2832263-2834847:+|nuORF;ENSG00000172006|ENST00000317243|ZNF554	ENST00000588534.1_1_19:2832263-2834847:+|nuORF	ENST00000588534.1_1_19:2832263-2834847:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852783203125	2	407.737086	813.459619	2.7427	0.0011183	-1.9814	-0.0008079	0.76128	0.0003104	407.736117436916	29.404	0.54213	29.385	29.079	29.621	-0.019405					33	20	2	0	0	0	0.4196	1	1480	1480		25.574	0	1	20693			55097	6734	36766	36781	62394	62394					0.04542710977432307
SPAPAARLNEG	11	Unmodified	_SPAPAARLNEG_					0	0	0			REV__ENSG00000130487|ENST00000648057|KLHDC7B	REV__ENSG00000130487|ENST00000648057|KLHDC7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.78564453125	2	541.783087	1081.55162	-0.1772	-9.6005E-05	4.2322	0.0022929	4.055	0.0021969	541.7852873202811	56.84	2.4261	56.873	56.56	58.986	0.033184					182	81	4	0	0	0	0.33509	1	5208	5208		65.465	1.2581	1	6132200	+		55098	18877	36767	36782	62395	62395					0.014107693237747299
SPAPFSSL	8	Unmodified	_SPAPFSSL_					0	0	0		ENST00000380191.8_1_10:5855216-5855492:-|nuORF	ENST00000380191.8_1_10:5855216-5855492:-|nuORF	ENST00000380191.8_1_10:5855216-5855492:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2096862792969	2	403.208161	804.401769	-1.8186	-0.00073328	3.912	0.0015773	2.0934	0.00084407	403.20969687299277	85.674	2.1245	85.86	85.144	87.269	0.18523					94	49	3	0	0	0	0.90465	1	8369	8369		40.573	7.057	1	1250400			55099	10914	36768	36783	62396	62396					-0.008255509480022738
SPAPFSSL	8	Unmodified	_SPAPFSSL_					0	0	0		ENST00000380191.8_1_10:5855216-5855492:-|nuORF	ENST00000380191.8_1_10:5855216-5855492:-|nuORF	ENST00000380191.8_1_10:5855216-5855492:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2113037109375	2	403.208161	804.401769	-1.8542	-0.00074762	4.1393	0.001669	2.2851	0.00092137	403.2097445210388	85.667	2.0538	85.825	85.416	87.47	0.15851					103	47	4	0	0	0	0.85277	1	8331	8331		25.45	2.4077	1	1256500			55100	10914	36768	36783	62397	62397					-0.008255509480022738
SPAPPKGR	8	Unmodified	_SPAPPKGR_					0	0	0			REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.21783447265625	2	405.235045	808.455536	0.75588	0.00030631	3.9609	0.0016051	4.7168	0.0019114	405.23572755618	85.215	1.9939	85.143	83.935	85.929	-0.07196					85	45	3	0	0	0	0.4196	1	8834	8834		16.473	0	1	497050	+		55101	16153	36769	36784	62398	62398					0.04364666274375395
SPAPPKGR	8	Unmodified	_SPAPPKGR_					0	0	0			REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	405.235045	808.455536	-1.2219	-0.00049516	3.9062	0.0015829	2.6843	0.0010878	405.23663957432825	85.278	0.70207	85.278	84.831	85.534	0	0.1376	0.0012762	NaN	10.265	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	282420	+		55102	16153	36769	36784							0.04364666274375395
SPAPPKGR	8	Unmodified	_SPAPPKGR_					0	0	0			REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	405.235045	808.455536	-0.18722	-7.5866E-05	2.7542	0.0011161	2.567	0.0010402	405.23612824955836	85.176	0.91694	85.243	84.549	85.466	0.067261	0.10272	0.00034256	NaN	10.265	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	422390	+		55103	16153	36769	36784							0.04364666274375395
SPAPPKGR	8	Unmodified	_SPAPPKGR_					0	0	0			REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	405.235045	808.455536	2.871	0.0011634	-0.42006	-0.00017022	2.4509	0.00099319	405.23486399290215	84.95	0.82655	85.01	84.457	85.284	0.05925	-0.13053	-0.0022301	NaN	10.265	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	493100	+		55104	16153	36769	36784							0.04364666274375395
SPAPPKGR	8	Unmodified	_SPAPPKGR_					0	0	0			REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	405.235045	808.455536	0.59128	0.00023961	1.8941	0.00076756	2.4854	0.0010072	405.2357576334827	85.011	0.78036	85.16	84.604	85.384	0.14857	0.019444	-0.00035449	NaN	10.265	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	347870	+		55105	16153	36769	36784							0.04364666274375395
SPAPPKGR	8	Unmodified	_SPAPPKGR_					0	0	0			REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	REV__ENST00000467221.1_1_7:73010882-73011686:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	405.235045	808.455536	-1.8212	-0.000738	3.9614	0.0016053	2.1402	0.00086729	405.236681091569	84.859	0.73996	85.009	84.623	85.363	0.14952	-0.13172	0.001321	NaN	10.265	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	316980	+		55106	16153	36769	36784							0.04364666274375395
SPAQEDGKVY	10	Unmodified	_SPAQEDGKVY_					0	0	0		ENSG00000126264|ENST00000246551|HCST	ENSG00000126264|ENST00000246551|HCST	ENSG00000126264|ENST00000246551|HCST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.260986328125	2	547.261653	1092.50875	-1.7232	-0.00094303	1.8611	0.0010185	0.13794	7.5489E-05	547.2625866008523	30.663	0.62025	30.692	30.406	31.026	0.028618					30	13	3	0	0	0	0.32482	1	2019	2019		70.399	6.1913	1	283400			55107	3452	36770	36785	62399	62399					-0.03380045524272646
SPAQEDGKVY	10	Unmodified	_SPAQEDGKVY_					0	0	0		ENSG00000126264|ENST00000246551|HCST	ENSG00000126264|ENST00000246551|HCST	ENSG00000126264|ENST00000246551|HCST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.2610473632812	2	547.261653	1092.50875	-0.01222	-6.6878E-06	0.29266	0.00016016	0.28044	0.00015347	547.2616792822544	30.702	0.8256	30.706	30.491	31.317	0.0037212					31	18	3	0	0	0	0.44803	2	2043	2043;2055		60.118	15.93	1	383540			55108	3452	36770	36785	62400;62401	62400					-0.03380045524272646
SPARAARA	8	Unmodified	_SPARAARA_					0	0	0			REV__ENST00000427525.2_1_15:85175388-85177573:+|nuORF	REV__ENST00000427525.2_1_15:85175388-85177573:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2281188964844	2	400.230294	798.446034	-1.8752	-0.0007505	-2.6209	-0.001049	-4.4961	-0.0017995	400.22927707495484	54.825	2.6613	54.881	53.254	55.915	0.055611					132	91	2	0	0	0	0.79929	1	4553	4553		18.324	0	1	1098100	+		55109	26564	36771	36786	62402	62402					0.03874897988839621
SPASPHSQ	8	Unmodified	_SPASPHSQ_					0	0	0		nc|ENSG00000091039|Q9BZF1-3|OSBPL8;nc|ENSG00000091039|Q9BZF1-2|OSBPL8;ENSG00000091039|ENST00000261183|OSBPL8	nc|ENSG00000091039|Q9BZF1-3|OSBPL8	nc|ENSG00000091039|Q9BZF1-3|OSBPL8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.68798828125	2	405.690667	809.366781	2.7526	0.0011167	-2.415	-0.00097974	0.33757	0.00013695	405.6896849218663	28.792	0.50888	28.773	28.523	29.032	-0.019405					24	15	2	0	0	0	0.4196	1	1387	1387		17.365	5.8539	1	42760			55110	1664	36772	36787	62403	62403					-0.04552793755954099
SPATAWPFKAY	11	Unmodified	_SPATAWPFKAY_					0	0	0		HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|50|2|sense;chr3:106926196-106927835|20|15.85|0.0|12.7|-|1|TE_info:HERVH-int,HERVH-int_dup1181,ERV1,LTR,acceptor,-,106925057,106926196|None,LINC00882|14	HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|50|2|sense	HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|50|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8153076171875	2	619.813856	1237.61316	-0.24749	-0.0001534	-0.21288	-0.00013194	-0.46037	-0.00028534	619.8137253691873	54.001	0.63056	53.995	53.728	54.359	-0.0053711					31	19	2	0	0	0	0.72374	1	4768	4768		24.519	0	1	90899			55111	382	36773	36788	62404	62404					0.0038570102310586662
SPATNGCSA	9	Unmodified	_SPATNGCSA_					0	0	0			REV__ENST00000374280.3_1_1:26349336-26349810:+|nuORF	REV__ENST00000374280.3_1_1:26349336-26349810:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.1705627441406	2	404.16871	806.322867	-0.18774	-7.5878E-05	3.363	0.0013592	3.1752	0.0012833	404.170229386983	78.542	2.4005	78.598	78.112	80.513	0.056114					177	77	5	0	0	0	0.7932	1	7722	7722		20.947	0.95016	1	6189200	+		55112	25785	36774	36789	62405	62405					-0.08804146244597177
SPATNGCSA	9	Unmodified	_SPATNGCSA_					0	0	0			REV__ENST00000374280.3_1_1:26349336-26349810:+|nuORF	REV__ENST00000374280.3_1_1:26349336-26349810:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.1703796386719	2	404.16871	806.322867	2.4772	0.0010012	0.73353	0.00029647	3.2107	0.0012977	404.16914392538314	78.456	2.0058	78.508	78.086	80.092	0.051682					179	62	5	0	0	0	0.7932	1	7815	7815		26.693	2.1889	1	6709200	+		55113	25785	36774	36789	62406	62406					-0.08804146244597177
SPATNGCSA	9	Unmodified	_SPATNGCSA_					0	0	0			REV__ENST00000374280.3_1_1:26349336-26349810:+|nuORF	REV__ENST00000374280.3_1_1:26349336-26349810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.1702575683594	2	404.16871	806.322867	0.53213	0.00021507	2.6453	0.0010691	3.1774	0.0012842	404.1699082116052	78.324	2.0905	78.461	78.03	80.121	0.13667					171	70	5	0	0	0	0.73802	1	7437	7437		37.812	5.8567	1	7251300	+		55114	25785	36774	36789	62407	62407					-0.08804146244597177
SPDDPPWGHT	10	Unmodified	_SPDDPPWGHT_					0	0	0			REV__nc|ENSG00000162897|Q8WWV6-5|FCAMR	REV__nc|ENSG00000162897|Q8WWV6-5|FCAMR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7381591796875	2	554.738345	1107.46214	0.25262	0.00014014	-3.9235	-0.0021765	-3.6709	-0.0020364	554.7359710182415	30.684	0.5824	30.637	30.181	30.763	-0.047062					26	14	3	0	0	0	0.86718	1	1691	1691		27.882	2.3082	1	46030	+		55115	29977	36775	36790	62408	62408					-0.08729485355570432
SPDRCALEVAH	11	Unmodified	_SPDRCALEVAH_					0	0	0			REV__ENSG00000130638|ENST00000252934|ATXN10	REV__ENSG00000130638|ENST00000252934|ATXN10	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.29052734375	2	599.287679	1196.56081	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.569	1	54.543	54.043	55.043	-0.025955								0	0	0	0.56276	1	4928	4928		36.447	4.9169	1		+		55116	18886	36776	36791	62409	62409					-0.02961205382166554
SPDRKLAVF	9	Unmodified	_SPDRKLAVF_					0	0	0		ENST00000483778.5_1_2:242593961-242598937:+|nuORF	ENST00000483778.5_1_2:242593961-242598937:+|nuORF	ENST00000483778.5_1_2:242593961-242598937:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7937622070312	2	516.795466	1031.57638	-1.1229	-0.00058032	-2.9464	-0.0015227	-4.0693	-0.002103	516.7939356050468	88.475	2.4458	88.946	87.694	90.139	0.47068					178	59	4	0	0	0	0.7932	1	10459	10459		26.693	0	1	833210			55117	12522	36777	36792	62410	62410					0.061854491971644165
SPDSQEEQKGE	11	Unmodified	_SPDSQEEQKGE_					0	0	0		nc|ENSG00000131016|Q02952-2|AKAP12;nc|ENSG00000131016|Q02952-3|AKAP12;ENSG00000131016|ENST00000402676|AKAP12	nc|ENSG00000131016|Q02952-2|AKAP12	nc|ENSG00000131016|Q02952-2|AKAP12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	617.2623291015625	2	617.265121	1232.51569	-0.29925	-0.00018472	-4.1636	-0.0025701	-4.4629	-0.0027548	617.2623760578864	55.767	0.40106	55.757	55.575	55.976	-0.010136					18	11	2	0	0	0	0.74022	1	4986	4986		24.232	0.70912	1	84214			55118	14911	36778	36793	62411	62411					-0.09126777434357791
SPDVIKLA	8	Unmodified	_SPDVIKLA_					0	0	0			REV__ENSG00000115548|ENST00000312912|KDM3A	REV__ENSG00000115548|ENST00000312912|KDM3A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.75238037109375	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.572	1	75.618	75.118	76.118	0.045959								0	0	0	0.30045	1	7268	7268		40.573	7.057	1		+		55119	18128	36779	36794	62412	62412					0.06383284011519663
SPEDFVYQF	9	Unmodified	_SPEDFVYQF_					0	0	0		nc|ENSG00000179344|P01920|HLA-DQB1	nc|ENSG00000179344|P01920|HLA-DQB1	nc|ENSG00000179344|P01920|HLA-DQB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.2532348632812	2	566.253297	1130.49204	0.032224	1.8247E-05	0.26683	0.00015109	0.29905	0.00016934	566.2532861911172	85.184	0.75889	85.624	85.269	86.028	0.43967					51	18	4	0	0	0	0.062302	2	9934	9934;9945		102.77	34.289	1	1450800			55120	15126	36780	36795	62413;62414	62413					-0.0679854641023212
SPEDFVYQF	9	Unmodified	_SPEDFVYQF_					0	0	0		nc|ENSG00000179344|P01920|HLA-DQB1	nc|ENSG00000179344|P01920|HLA-DQB1	nc|ENSG00000179344|P01920|HLA-DQB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.2526245117188	2	566.253297	1130.49204	0.37533	0.00021253	0.020734	1.1741E-05	0.39606	0.00022427	566.2531146691288	85.18	0.95868	85.627	85.276	86.235	0.44736					59	23	3	0	0	0	0.057432	4	9983	9961;9972;9983;9995		104.75	35.168	1	1208100			55121	15126	36780	36795	62415;62416;62417;62418	62417					-0.0679854641023212
SPEGTVLV	8	Unmodified	_SPEGTVLV_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2225036621094	2	401.221268	800.427984	0.2725	0.00010933	2.1154	0.00084876	2.3879	0.00095809	401.2219254800666	30.719	1.1019	30.759	30.329	31.431	0.039999					46	24	3	0	0	0	0.93529	1	2057	2057		52.299	0	1	330060			55122	8832	36781	36796	62419	62419					0.01978718223483611
SPEPDTSVH	9	Unmodified	_SPEPDTSVH_					0	0	0		nc|ENSG00000170836|O15297-2|PPM1D;ENSG00000170836|ENST00000305921|PPM1D	nc|ENSG00000170836|O15297-2|PPM1D	nc|ENSG00000170836|O15297-2|PPM1D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.7178649902344	2	484.719621	967.42469	-1.6647	-0.00080692	-1.0387	-0.00050347	-2.7034	-0.0013104	484.718975245025	98.748	4.2341	98.941	95.671	99.905	0.1928					171	98	2	0	0	0	0.78058	1	10311	10311		30.504	6.3009	1	437580			55123	6617	36782	36797	62420	62420					-0.06032576621191765
SPFEFGFTF	9	Unmodified	_SPFEFGFTF_					0	0	0		ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;nc|ENSG00000105993|O75190-4|DNAJB6;ENST00000485817.1_1_3:125063303-125063474:-|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.7481689453125	2	539.74765	1077.48075	1.3214	0.0007132	-1.2304	-0.00066412	0.090931	4.908E-05	539.7467475229064	103.13	0.43361	103.35	103.2	103.63	0.22556					21	10	3	0	0	0	0.062302	2	12537	12537;12549		102.77	44.962	1	925720			55124	2271	36783	36798	62421;62422	62421					-0.05489323713709382
SPFEFGFTF	9	Unmodified	_SPFEFGFTF_					0	0	0		ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;nc|ENSG00000105993|O75190-4|DNAJB6;ENST00000485817.1_1_3:125063303-125063474:-|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	ENST00000526843.2_1_11:127810983-127811547:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.746337890625	2	539.74765	1077.48075	2.7198	0.001468	-2.6716	-0.001442	0.048189	2.601E-05	539.7462593507273	103.14	0.35374	103.41	103.23	103.58	0.26524					19	8	3	0	0	0	0.0092756	2	12584	12584;12596		133.81	32.601	1	853480			55125	2271	36783	36798	62423;62424	62423					-0.05489323713709382
SPFFERSGLAY	11	Unmodified	_SPFFERSGLAY_					0	0	0		ENST00000530561.5_1_11:58294929-58321330:-|nuORF;ENSG00000110031|ENST00000395074|LPXN;nc|ENSG00000110031|O60711-2|LPXN	ENST00000530561.5_1_11:58294929-58321330:-|nuORF	ENST00000530561.5_1_11:58294929-58321330:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	637.314208984375	2	637.31422	1272.61389	-0.22879	-0.00014581	0.73765	0.00047011	0.50886	0.0003243	637.3146066499098	64.321	1.8341	64.708	63.919	65.753	0.3868					73	43	3	0	0	0	0.38974	2	6954	6954;6968		60.167	19.594	1	464870			55126	2501	36784	36799	62425;62426	62425					-0.011515043278222947
SPFFERSGLAY	11	Unmodified	_SPFFERSGLAY_					0	0	0		ENST00000530561.5_1_11:58294929-58321330:-|nuORF;ENSG00000110031|ENST00000395074|LPXN;nc|ENSG00000110031|O60711-2|LPXN	ENST00000530561.5_1_11:58294929-58321330:-|nuORF	ENST00000530561.5_1_11:58294929-58321330:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	637.3142700195312	2	637.31422	1272.61389	1.396	0.0008897	-1.0961	-0.00069859	0.29988	0.00019111	637.3134915549126	64.231	1.486	64.785	64.168	65.654	0.55386					61	35	4	0	0	0	0.32097	4	6946	6946;6959;6970;6983		70.399	33.952	1	470880			55127	2501	36784	36799	62427;62428;62429;62430	62427					-0.011515043278222947
SPFFSEDTF	9	Unmodified	_SPFFSEDTF_					0	0	0		nc|ENSG00000151612|Q17R98-2|ZNF827;ENSG00000151612|ENST00000508784|ZNF827;nc|ENSG00000151612|Q17R98-3|ZNF827	nc|ENSG00000151612|Q17R98-2|ZNF827	nc|ENSG00000151612|Q17R98-2|ZNF827	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.7279663085938	2	538.732197	1075.44984	-1.1618	-0.00062589	-1.7324	-0.00093329	-2.8942	-0.0015592	538.7306926242587	60.454	0.49396	60.843	60.645	61.139	0.38945					23	13	2	0	0	0	0.78536	1	6417	6417		29.15	2.3535	1	375160			55128	5129	36785	36800	62431	62431					-0.0848652181862235
SPFISTLIL	9	Unmodified	_SPFISTLIL_					0	0	0			REV__nc|ENSG00000204965|Q9Y5H7-2|PCDHA5	REV__nc|ENSG00000204965|Q9Y5H7-2|PCDHA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7969970703125	2	495.797143	989.579734	3.6416	0.0018055	-3.7269	-0.0018478	-0.085301	-4.2292E-05	495.7951678077777	105.11	0.93385	105.34	105.01	105.95	0.2268					55	22	3	0	0	0	0.43338	1	12861	12861		55.504	5.4797	1	568440	+		55129	30166	36786	36801	62432	62432					0.08452699251199647
SPFPNSWNSL	10	Unmodified	_SPFPNSWNSL_					0	0	0		ENST00000479644.1_1_6:31939773-31940810:+|nuORF;ENST00000478486.5_1_6:31940188-31947331:+|nuORF;ENST00000469907.1_1_6:31940369-31948823:+|nuORF	ENST00000479644.1_1_6:31939773-31940810:+|nuORF	ENST00000479644.1_1_6:31939773-31940810:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.7711791992188	2	574.772188	1147.52982	-0.78611	-0.00045184	-4.179	-0.002402	-4.9651	-0.0028538	574.7696176678855	59.825	1.2222	60.378	59.958	61.18	0.55323					89	32	4	0	0	0	0.42897	1	6395	6395		61.691	1.573	1	4150300			55130	12412	36787	36802	62433	62433					-0.03804035424764152
SPFQPHVPY	9	Unmodified	_SPFQPHVPY_					0	0	0		nc|ENSG00000149657|Q9BX40-2|LSM14B;ENSG00000149657|ENST00000279068|LSM14B	nc|ENSG00000149657|Q9BX40-2|LSM14B	nc|ENSG00000149657|Q9BX40-2|LSM14B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2677612304688	2	536.266542	1070.51853	-0.77498	-0.0004156	0.7285	0.00039067	-0.046478	-2.4925E-05	536.2667987467431	54.25	0.62654	54.834	54.501	55.127	0.58474					33	14	3	0	0	0	0.19818	1	5541	5541		74.255	13.961	1	558760			55131	5045	36788	36803	62434	62434					-0.013908127282320493
SPFSTFKNS	9	Unmodified	_SPFSTFKNS_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.2511291503906	2	507.748182	1013.48181	0.24723	0.00012553	2.0697	0.0010509	2.3169	0.0011764	508.2512514731221	31.025	1.5652	31.044	30.249	31.815	0.018362					50	41	2	0	0	0	0.74721	1	1675	1675		37.159	1.9584	1	310440	+		55132	23043	36789	36804	62435	62435					-0.024391093448116408
SPFVSLGY	8	Unmodified	_SPFVSLGY_					0	0	0			REV__ENSG00000197977|ENST00000354666|ELOVL2	REV__ENSG00000197977|ENST00000354666|ELOVL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.22308349609375	2	435.223811	868.433069	0.32239	0.00014031	-0.95539	-0.00041581	-0.633	-0.0002755	435.223399209331	94.324	0.97275	94.759	94.514	95.487	0.43539					50	24	3	0	0	0	0.92176	1	11291	11291		46.766	6.1938	1	1317400	+		55133	23284	36790	36805	62436	62436					-0.006409779139062266
SPFYPGKTTY	10	Unmodified	_SPFYPGKTTY_					0	0	0		nc|ENSG00000124789|P49790-3|NUP153;ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153	nc|ENSG00000124789|P49790-3|NUP153	nc|ENSG00000124789|P49790-3|NUP153	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.7824096679688	2	580.784764	1159.55498	-0.82479	-0.00047902	0.59062	0.00034302	-0.23417	-0.000136	580.7850629471108	48.284	0.60398	49.189	48.886	49.49	0.90462					39	14	4	0	0	0	0.24988	1	4660	4660		78.264	24.912	1	1055300			55134	3362	36791	36806	62437	62437					-0.018419806221800172
SPFYPGKTTY	10	Unmodified	_SPFYPGKTTY_					0	0	0		nc|ENSG00000124789|P49790-3|NUP153;ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153	nc|ENSG00000124789|P49790-3|NUP153	nc|ENSG00000124789|P49790-3|NUP153	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	580.784764	1159.55498	-1.961	-0.0011389	1.6245	0.00094347	-0.33656	-0.00019547	580.7857637732368	48.458	0.68546	48.927	48.587	49.272	0.46941	-0.13081	0.00040078	NaN	78.264	41	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1092200			55135	3362	36791	36806							-0.018419806221800172
SPGCVKAHVI	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SPGCVKAHVI_					1	0	0			REV__chr16:29906566-29910978|60|15.92|0.57|4.8|-|ENST00000568995|KCTD13,KCTD13	REV__chr16:29906566-29910978|60|15.92|0.57|4.8|-|ENST00000568995|KCTD13,KCTD13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.7799682617188	2	526.781502	1051.54845	-0.6273	-0.00033045	-2.4142	-0.0012718	-3.0415	-0.0016022	526.7800704110876	62.601	0.89739	62.624	62.313	63.21	0.022984					97	40	3	0	0	0	0.67571	1	5487	5487		45.972	7.1661	1	577420	+		55136	15631	36792	36807	62438	62438					0.02473802945451098
SPGDTETT	8	Unmodified	_SPGDTETT_					0	0	0		ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	ENSG00000205277|ENST00000536621|MUC12	ENSG00000205277|ENST00000536621|MUC12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.17034912109375	2	404.171973	806.329392	-1.5918	-0.00064335	-3.287	-0.0013285	-4.8787	-0.0019719	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.8347	1	7412	7412		23.042	1.3402	1	6183600			55137	8520	36793	36808	62439	62439					-0.08151929812231629
SPGFFIYFH	9	Unmodified	_SPGFFIYFH_					0	0	0			REV__ENSG00000137103|ENST00000643932|TMEM8B;REV__ENST00000490199.2_1_9:35841173-35846157:+|nuORF	REV__ENST00000490199.2_1_9:35841173-35846157:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.7854614257812	2	557.77146	1113.52837	-0.35907	-0.00020028	-4.054	-0.0022612	-4.4131	-0.0024615	557.7691529759849	36.323	0.3169	36.267	36.017	36.334	-0.055904					10	6	2	0	0	0	0.20789	1	2417	2417		24.203	0	1	26198	+		55138	19361;27634	36794	36809	62440	62440					-0.023856247228650318
SPGGPGGP	8	Unmodified	_SPGGPGGP_					0	0	0		ENSG00000142408|ENST00000270458|CACNG8	ENSG00000142408|ENST00000270458|CACNG8	ENSG00000142408|ENST00000270458|CACNG8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.2937622070312	1	625.294016	624.28674	-0.45354	-0.0002836	0.84087	0.00052579	0.38733	0.00024219	625.294171681287	34.824	2.8228	34.768	33.286	36.109	-0.056385					99	63	2	0	0	0	0.81724	1	2242	2242		14.664	0	1	62737			55139	4562	36795	36810	62441	62441					-0.04043235359142727
SPGHILRVY	9	Unmodified	_SPGHILRVY_					0	0	0		ENSG00000126773|ENST00000406854|PCNX4;ENST00000483571.5_1_14:60582139-60592559:+|nuORF	ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2731323242188	2	521.295633	1040.57671	-0.07259	-3.7841E-05	-1.2357	-0.00064418	-1.3083	-0.00068202	521.7972637628592	44.2	0.41062	44.65	44.401	44.812	0.45025					14	9	3	0	0	0	0.20789	1	4037	4037		23.042	13.86	1	272140			55140	3466	36796	36811	62442	62442					0.0580486891703913
SPGKLLVKMPF	11	Unmodified	_SPGKLLVKMPF_					0	0	0		nc|ENSG00000169057|P51608|MECP2;ENSG00000169057|ENST00000453960|MECP2	nc|ENSG00000169057|P51608|MECP2	nc|ENSG00000169057|P51608|MECP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.552490234375	3	406.24226	1215.70495	0.80661	0.00032768	2.3581	0.00095797	3.1647	0.0012856	406.2432756611121	28.457	0.45262	28.284	28.057	28.51	-0.17336					15	11	2	0	0	0	0.17375	1	1755	1755		18.531	3.1979	1	48734			55141	6465	36797	36812	62443	62443					0.10572668115901251
SPGLVRLTAPS	11	Unmodified	_SPGLVRLTAPS_					0	0	0			REV__ENST00000318217.9_1_17:30821573-30821762:-|nuORF	REV__ENST00000318217.9_1_17:30821573-30821762:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3189697265625	2	549.319306	1096.62406	0.85078	0.00046735	-3.9097	-0.0021477	-3.0589	-0.0016803	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.72106	1	10663	10663		28.081	0	1	2023500	+		55142	24971	36798	36813	62444	62444					0.07961103397360603
SPGMVINV	8	Unmodified	_SPGMVINV_					0	0	0			REV__ENSG00000135749|ENST00000258229|PCNX2	REV__ENSG00000135749|ENST00000258229|PCNX2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.25030517578125	2	408.717839	815.421125	0.978	0.00039973	2.1595	0.00088265	3.1375	0.0012824	408.71960315028866	28.106	0.37858	27.851	27.632	28.01	-0.25465					10	8	2	0	0	0	0.4196	1	1682	1682		7.1934	3.7833	1	36456	+		55143	19245	36799	36814	62445	62445					0.006030820712453533
SPGNGPAAH	9	Unmodified	_SPGNGPAAH_					0	0	0		ENST00000391773.5_1_19:54327198-54327612:-|nuORF	ENST00000391773.5_1_19:54327198-54327612:-|nuORF	ENST00000391773.5_1_19:54327198-54327612:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.17034912109375	2	404.190834	806.367115	1.2985	0.00052484	-4.233	-0.0017109	-2.9345	-0.0011861	404.18877080747274	77.722	0.24586	78.127	77.977	78.223	0.40531					7	5	2	0	0	0	0.20789	1	8864	8864		40.573	22.248	1	77470			55144	10999	36800	36815	62446	62446					-0.043813740361088094
SPGQGHYGMA	10	Unmodified	_SPGQGHYGMA_					0	0	0			REV__ENSG00000173575|ENST00000394196|CHD2	REV__ENSG00000173575|ENST00000394196|CHD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8138122558594	2	502.716359	1003.41816	2.3175	0.0011651	-0.85547	-0.00043006	1.4621	0.00073501	503.21889567243863	97.32	0.16698	97.264	97.187	97.354	-0.055542					5	3	2	0	0	0	0.37624	1	10462	10462		44.117	0	1	56822	+		55145	21933	36801	36816	62447	62447					-0.08340793053548623
SPGRKVLL	8	Unmodified	_SPGRKVLL_					0	0	0		nc|ENSG00000152822|Q13255-2|GRM1;chr6:146399699-146426559|15|12.13|0.39|4.95|+|ENST00000507907|GRM1,GRM1;nc|ENSG00000152822|Q13255-3|GRM1;ENSG00000152822|ENST00000282753|GRM1;ENST00000507005.1_1_6:146350692-146480734:+|nuORF	nc|ENSG00000152822|Q13255-2|GRM1	nc|ENSG00000152822|Q13255-2|GRM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77911376953125	2	435.281995	868.549437	0.44783	0.00019493	-1.4769	-0.00064285	-1.029	-0.00044792	435.28135436074973	60.841	0.31172	60.872	60.717	61.029	0.0312					18	11	2	0	0	0	0.4196	1	5699	5699		18.324	0	1	72468			55146	469	36802	36817	62448	62448					0.10990385376669565
SPGRKVLL	8	Unmodified	_SPGRKVLL_					0	0	0		nc|ENSG00000152822|Q13255-2|GRM1;chr6:146399699-146426559|15|12.13|0.39|4.95|+|ENST00000507907|GRM1,GRM1;nc|ENSG00000152822|Q13255-3|GRM1;ENSG00000152822|ENST00000282753|GRM1;ENST00000507005.1_1_6:146350692-146480734:+|nuORF	nc|ENSG00000152822|Q13255-2|GRM1	nc|ENSG00000152822|Q13255-2|GRM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	435.281995	868.549437	0.37608	0.0001637	-1.4126	-0.0006149	-1.0366	-0.0004512	435.2812977378186	60.979	0.47106	61.098	60.689	61.16	0.11901	0.12512	-0.00046488	NaN	23.042	25	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156460			55147	469	36802	36817							0.10990385376669565
SPGRKVLL	8	Unmodified	_SPGRKVLL_					0	0	0		nc|ENSG00000152822|Q13255-2|GRM1;chr6:146399699-146426559|15|12.13|0.39|4.95|+|ENST00000507907|GRM1,GRM1;nc|ENSG00000152822|Q13255-3|GRM1;ENSG00000152822|ENST00000282753|GRM1;ENST00000507005.1_1_6:146350692-146480734:+|nuORF	nc|ENSG00000152822|Q13255-2|GRM1	nc|ENSG00000152822|Q13255-2|GRM1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	435.281995	868.549437	-0.85315	-0.00037136	-0.025402	-1.1057E-05	-0.87856	-0.00038242	435.2818487254401	60.941	0.79914	60.949	60.267	61.066	0.0081177	-0.023797	0.0007428	NaN	23.042	41	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164130			55148	469	36802	36817							0.10990385376669565
SPGRRPRG	8	Unmodified	_SPGRRPRG_					0	0	0		nc|ENSG00000055118|Q12809-2|KCNH2	nc|ENSG00000055118|Q12809-2|KCNH2	nc|ENSG00000055118|Q12809-2|KCNH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7879943847656	2	441.754467	881.494381	0.18587	8.2107E-05	-3.5689	-0.0015766	-3.383	-0.0014945	441.75266927321206	39.007	0.4758	39.096	38.851	39.327	0.088375					15	12	2	0	0	0	0.4196	1	2341	2341		6.3127	0	1	82139			55149	14757	36803	36818	62449	62449					0.048893916287511274
SPGRSLRP	8	Unmodified	_SPGRSLRP_					0	0	0		nc|ENSG00000004777|O14559-10|ARHGAP33;nc|ENSG00000004777|O14559-11|ARHGAP33;ENSG00000004777|ENST00000007510|ARHGAP33	nc|ENSG00000004777|O14559-10|ARHGAP33	nc|ENSG00000004777|O14559-10|ARHGAP33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2521667480469	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.86677	1	7604	7604		27.882	0	1	3292300			55150	665	36804	36819	62450	62450					0.04839453677379879
SPGRTPRAP	9	Unmodified	_SPGRTPRAP_					0	0	0			REV__ENST00000571689.1_1_17:5138078-5138517:+|nuORF	REV__ENST00000571689.1_1_17:5138078-5138517:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7621765136719	2	469.761958	937.509363	-1.0651	-0.00050035	-0.060913	-2.8615E-05	-1.126	-0.00052896	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.76764	1	1897	1897		34.173	3.6689	1	219920	+		55151	28933	36805	36820	62451	62451					0.03810838706067443
SPGTRRPV	8	Unmodified	_SPGTRRPV_					0	0	0		nc|ENSG00000231028|P0C7V0|AHI1-DT	nc|ENSG00000231028|P0C7V0|AHI1-DT	nc|ENSG00000231028|P0C7V0|AHI1-DT	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2527160644531	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.8537	1	7706	7706		25.574	1.3713	1	1788100			55152	15270	36806	36821	62452	62452					0.04839453677379879
SPGVPVAKVV	10	Unmodified	_SPGVPVAKVV_					0	0	0		ENSG00000015532|ENST00000017003|XYLT2;nc|ENSG00000015532|Q9H1B5-2|XYLT2	ENSG00000015532|ENST00000017003|XYLT2	ENSG00000015532|ENST00000017003|XYLT2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.79718017578125	2	476.794935	951.575317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.206	1	23.259	22.759	23.759	0.05291								0	0	0	0.45132	1	728	728		20.947	2.6225	1				55153	824	36807	36822	62453	62453					0.09759234828277386
SPIDVVEKY	9	Unmodified	_SPIDVVEKY_					0	0	0		ENSG00000117153|ENST00000367261|KLHL12;nc|ENSG00000117153|Q53G59-2|KLHL12	ENSG00000117153|ENST00000367261|KLHL12	ENSG00000117153|ENST00000367261|KLHL12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.2788696289062	2	525.279315	1048.54408	0.30834	0.00016197	-0.22456	-0.00011796	0.083781	4.4008E-05	525.2789880396814	56.265	0.56053	56.662	56.425	56.985	0.39672					30	14	3	0	0	0	0.094633	1	5824	5824		93.598	11.357	1	1346600			55154	2965	36808	36823	62454	62454					0.02174617003538515
SPIDVVEKY	9	Unmodified	_SPIDVVEKY_					0	0	0		ENSG00000117153|ENST00000367261|KLHL12;nc|ENSG00000117153|Q53G59-2|KLHL12	ENSG00000117153|ENST00000367261|KLHL12	ENSG00000117153|ENST00000367261|KLHL12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2783813476562	2	525.279315	1048.54408	0.59687	0.00031352	-0.27036	-0.00014201	0.32651	0.00017151	525.2790137155862	56.195	0.74057	56.754	56.313	57.054	0.55954					39	18	3	0	0	0	0.096326	2	5811	5811;5824		93.143	31.415	1	1362000			55155	2965	36808	36823	62455;62456	62455					0.02174617003538515
SPIENNSEPLV	11	Unmodified	_SPIENNSEPLV_					0	0	0		ENSG00000185046|ENST00000683438|ANKS1B;nc|ENSG00000185046|Q7Z6G8|ANKS1B;nc|ENSG00000185046|Q7Z6G8-6|ANKS1B	ENSG00000185046|ENST00000683438|ANKS1B	ENSG00000185046|ENST00000683438|ANKS1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.7981567382812	2	599.801143	1197.58773	-0.48594	-0.00029147	-3.9599	-0.0023752	-4.4459	-0.0026666	599.798633522002	54.581	0.37048	54.574	54.385	54.756	-0.0077057					21	13	2	0	0	0	0.7144	1	4836	4836		29.17	3.1067	1	80551			55156	7673	36809	36824	62457	62457					-0.0031581829000515427
SPIEPLNPV	9	Unmodified	_SPIEPLNPV_					0	0	0			REV__ENSG00000090924|ENST00000425673|PLEKHG2	REV__ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	483.2669982910156	2	483.26875	964.522947	-0.29636	-0.00014322	-2.6507	-0.001281	-2.9471	-0.0014242	483.2673804711497	16.334	0.18722	16.254	16.169	16.356	-0.080017					9	6	2	0	0	0	0.78124	1	106	106		30.318	7.2752	1	69049	+		55157	16999	36810	36825	62458	62458					0.03926651694678185
SPIEPLNPV	9	Unmodified	_SPIEPLNPV_					0	0	0			REV__ENSG00000090924|ENST00000425673|PLEKHG2	REV__ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	483.26875	964.522947	1.0064	0.00048635	-3.5017	-0.0016923	-2.4953	-0.0012059	483.26673663528084	16.049	0.20535	16.127	16.02	16.226	0.077959	-0.067628	-0.00090032	NaN	30.318	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37043	+		55158	16999	36810	36825							0.03926651694678185
SPIEPLNPV	9	Unmodified	_SPIEPLNPV_					0	0	0			REV__ENSG00000090924|ENST00000425673|PLEKHG2	REV__ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	483.26875	964.522947	-0.29636	-0.00014322	-2.6507	-0.001281	-2.9471	-0.0014242	483.2673804711497	16.334	0.18722	16.254	16.169	16.356	-0.080017	0.059709	-7.7785E-05	NaN	30.318	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69049	+		55159	16999	36810	36825							0.03926651694678185
SPIEPLNPV	9	Unmodified	_SPIEPLNPV_					0	0	0			REV__ENSG00000090924|ENST00000425673|PLEKHG2	REV__ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	483.26875	964.522947	-0.9152	-0.00044229	-2.3001	-0.0011116	-3.2153	-0.0015539	483.26752442865677	16.286	0.21252	16.202	16.115	16.328	-0.083363	0.0079186	0.00026108	NaN	30.318	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57452	+		55160	16999	36810	36825							0.03926651694678185
SPIEVRSCY	9	Unmodified	_SPIEVRSCY_					0	0	0			REV__ENSG00000168334|ENST00000340369|XIRP1	REV__ENSG00000168334|ENST00000340369|XIRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.2578125	2	527.255317	1052.49608	0.86662	0.00045693	2.6126	0.0013775	3.4792	0.0018344	527.256566104279	25.63	0.81838	25.598	25.164	25.983	-0.032125					65	25	4	0	0	0	0.77546	1	1012	1012		31.955	0.42505	1	358050	+		55161	21480	36811	36826	62459	62459					-0.02806780188166158
SPILTLIIG	9	Unmodified	_SPILTLIIG_					0	0	0			REV__nc|ENSG00000112337|O00624-2|SLC17A2	REV__nc|ENSG00000112337|O00624-2|SLC17A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.80078125	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3005	3005		17.365	5.1581	1	942760	+		55162	17942	36812	36827	62460	62460					0.11905003113815837
SPILTLIIG	9	Unmodified	_SPILTLIIG_					0	0	0			REV__nc|ENSG00000112337|O00624-2|SLC17A2	REV__nc|ENSG00000112337|O00624-2|SLC17A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.7983093261719	2	463.799686	925.584819	-0.080206	-3.7199E-05	1.9522	0.00090541	1.8719	0.00086821	463.80040731335265	41.41	1.3196	41.365	40.954	42.273	-0.045467					80	38	3	0	0	0	0.78536	1	2753	2753		29.15	6.1071	1	417210	+		55163	17942	36812	36827	62461	62461					0.11905003113815837
SPILTLIIG	9	Unmodified	_SPILTLIIG_					0	0	0			REV__nc|ENSG00000112337|O00624-2|SLC17A2	REV__nc|ENSG00000112337|O00624-2|SLC17A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7981872558594	2	463.799686	925.584819	-2.5644	-0.0011894	3.5074	0.0016267	0.94293	0.00043733	463.80118382898894	40.741	0.9326	41.133	40.832	41.765	0.39209					70	26	3	0	0	0	0.76764	1	3501	3501		34.173	3.6689	1	5806600	+		55164	17942	36812	36827	62462	62462					0.11905003113815837
SPILTLIIG	9	Unmodified	_SPILTLIIG_					0	0	0			REV__nc|ENSG00000112337|O00624-2|SLC17A2	REV__nc|ENSG00000112337|O00624-2|SLC17A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7989807128906	2	463.799686	925.584819	-1.7032	-0.00078997	2.9558	0.0013709	1.2525	0.00058091	463.8008996094523	40.729	0.89679	41.318	40.908	41.805	0.58916					67	25	3	0	0	0	0.7932	1	3509	3509		20.947	2.6225	1	5530000	+		55165	17942	36812	36827	62463	62463					0.11905003113815837
SPILTRLM	8	Unmodified	_SPILTRLM_					0	0	0		ENST00000488093.1_1_7:130138236-130140374:+|nuORF;chr7:130491486-130495368|55|49.13|0.79|5.96|+|ENST00000421001|MEST,MEST;nc|ENSG00000106484|Q5EB52-3|MEST;nc|ENSG00000106484|Q5EB52-2|MEST;chr7:130492584-130495368|58|68.22|0.76|6.49|+|ENST00000462132|MEST,MEST;ENSG00000106484|ENST00000223215|MEST	ENST00000488093.1_1_7:130138236-130140374:+|nuORF	ENST00000488093.1_1_7:130138236-130140374:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77789306640625	2	465.775688	929.536823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.395	1	79.338	78.838	79.838	-0.056503								0	0	0	0.29631	1	7945	7945		25.45	0.93098	1				55166	492	36813	36828	62464	62464					0.06923605922099796
SPIPFPPLSY	10	Unmodified	_SPIPFPPLSY_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.300537109375	2	559.30005	1116.58555	1.771	0.00099049	-1.8595	-0.00104	-0.088515	-4.9507E-05	559.2989040472133	93.61	0.96521	94.051	93.437	94.402	0.44099					63	24	4	0	0	0	0.097274	4	11154	11129;11141;11154;11178		101.6	55.649	1	1322200			55167	6918	36814	36829	62465;62466;62467;62468	62467					0.03191797762860915
SPIPFPPLSY	10	Unmodified	_SPIPFPPLSY_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2979736328125	2	559.30005	1116.58555	-0.12755	-7.1337E-05	0.14847	8.3038E-05	0.020921	1.1701E-05	559.2999136366896	93.749	1.0491	94.184	93.594	94.643	0.43539					60	26	3	0	0	0	0.097274	6	11244	11179;11201;11213;11225;11244;11254		101.6	38.067	1	1432900			55168	6918	36814	36829	62469;62470;62471;62472;62473;62474	62473					0.03191797762860915
SPIPFPPLSY	10	Unmodified	_SPIPFPPLSY_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	559.30005	1116.58555	-1.0673	-0.00059695	-6.6852	-0.0037391	-7.7526	-0.004336	559.2960672087542	94.057	1.0939	94.127	93.296	94.39	0.069603	0.080531	-0.0020235	NaN	101.6	40	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	167470			55169	6918	36814	36829							0.03191797762860915
SPIPFPPLSY	10	Unmodified	_SPIPFPPLSY_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	559.30005	1116.58555	1.3695	0.00076595	-8.7018	-0.0048669	-7.3323	-0.004101	559.2948777932005	93.888	0.72331	93.933	93.449	94.172	0.045456	-0.11311	-0.0042793	NaN	101.6	33	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165570			55170	6918	36814	36829							0.03191797762860915
SPIPFPPLSY	10	Unmodified	_SPIPFPPLSY_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	559.30005	1116.58555	0.3655	0.00020442	-7.8871	-0.0044113	-7.5216	-0.0042068	559.2953494077152	93.733	0.87903	93.962	93.239	94.118	0.22863	-0.084481	-0.0033679	NaN	101.6	32	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	204270			55171	6918	36814	36829							0.03191797762860915
SPIPFPPLSY	10	Unmodified	_SPIPFPPLSY_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	559.30005	1116.58555	-1.422	-0.0007953	-6.4455	-0.003605	-7.8675	-0.0044003	559.2962256845119	93.822	1.0092	94.021	93.073	94.082	0.19827	-0.025714	-0.0017554	NaN	101.6	32	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146440			55172	6918	36814	36829							0.03191797762860915
SPIQTSASPL	10	Unmodified	_SPIQTSASPL_					0	0	0		ENST00000505571.5_1_5:78915459-78919324:+|nuORF;nc|ENSG00000164329|Q6PIY7-2|TENT2;ENSG00000164329|ENST00000453514|TENT2	ENST00000505571.5_1_5:78915459-78919324:+|nuORF	ENST00000505571.5_1_5:78915459-78919324:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.7684631347656	2	500.769114	999.523675	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.833	1	54.825	54.325	55.325	-0.0077095								0	0	0	0.45132	1	4853	4853		51.193	0	1				55173	5956	36815	36830	62475	62475					0.0238944634369318
SPIVIISVV	9	Unmodified	_SPIVIISVV_					0	0	0		ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8009033203125	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	1	2757	2757		21.96	3.6355	1	489490			55174	4257	36816	36831	62476	62476					0.11905003113804469
SPIVIISVV	9	Unmodified	_SPIVIISVV_					0	0	0		ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8006896972656	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	1	3592	3592		16.473	3.514	1	1294000			55175	4257	36816	36831	62477	62477					0.11905003113804469
SPIVIISVV	9	Unmodified	_SPIVIISVV_					0	0	0		ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.79925537109375	2	463.799686	925.584819	-1.1413	-0.00052933	2.885	0.001338	1.7437	0.00080871	463.8009223906452	41.714	1.3576	41.718	41.166	42.524	0.0043983					77	36	3	0	0	0	0.78536	1	2717	2717		29.15	3.6994	1	388800			55176	4257	36816	36831	62478	62478					0.11905003113804469
SPIVIISVV	9	Unmodified	_SPIVIISVV_					0	0	0		ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8007507324219	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	2	3263	3263;3285		18.324	3.514	1	942760			55177	4257	36816	36831	62479;62480	62479					0.11905003113804469
SPIVIISVV	9	Unmodified	_SPIVIISVV_					0	0	0		ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	ENSG00000138031|ENST00000679454|ADCY3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.80035400390625	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.78058	1	3082	3082		30.504	6.3009	1	1091400			55178	4257	36816	36831	62481	62481					0.11905003113804469
SPIVLYLLAS	10	Unmodified	_SPIVLYLLAS_					0	0	0		ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3260498046875	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.44	1	114.41	113.91	114.91	-0.024452								0	0	0	0.45132	1	12679	12679		34.173	3.6689	1				55179	3269	36817	36832	62482	62482					0.0981665731396788
SPIVVITVV	9	Unmodified	_SPIVVITVV_					0	0	0			REV__nc|ENSG00000134545|P26715-2|KLRC1	REV__nc|ENSG00000134545|P26715-2|KLRC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.7994079589844	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3350	3350		24.203	0	1	1516700	+		55180	19150	36818	36833	62483	62483					0.11905003113804469
SPIVVITVV	9	Unmodified	_SPIVVITVV_					0	0	0			REV__nc|ENSG00000134545|P26715-2|KLRC1	REV__nc|ENSG00000134545|P26715-2|KLRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.7996826171875	2	463.799686	925.584819	-1.1413	-0.00052933	2.885	0.001338	1.7437	0.00080871	463.8009223906452	41.714	1.3576	41.718	41.166	42.524	0.0043983					77	36	3	0	0	0	0.64922	1	2707	2707		44.117	12.162	1	388800	+		55181	19150	36818	36833	62484	62484					0.11905003113804469
SPIVVITVV	9	Unmodified	_SPIVVITVV_					0	0	0			REV__nc|ENSG00000134545|P26715-2|KLRC1	REV__nc|ENSG00000134545|P26715-2|KLRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8004455566406	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.76255	1	3176	3176		35.618	0	1	942760	+		55182	19150	36818	36833	62485	62485					0.11905003113804469
SPIVVITVV	9	Unmodified	_SPIVVITVV_					0	0	0			REV__nc|ENSG00000134545|P26715-2|KLRC1	REV__nc|ENSG00000134545|P26715-2|KLRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.2931823730469	2	463.799686	925.584819	-0.080206	-3.7199E-05	1.9522	0.00090541	1.8719	0.00086821	463.80040731335265	41.41	1.3196	41.365	40.954	42.273	-0.045467					80	38	3	0	0	0	0.7932	1	2659	2659		23.042	1.0826	1	417210	+		55183	19150	36818	36833	62486	62486					0.11905003113804469
SPIVVITVV	9	Unmodified	_SPIVVITVV_					0	0	0			REV__nc|ENSG00000134545|P26715-2|KLRC1	REV__nc|ENSG00000134545|P26715-2|KLRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8004150390625	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.76255	1	3191	3191		35.618	2.1027	1	1091400	+		55184	19150	36818	36833	62487	62487					0.11905003113804469
SPIVVITVV	9	Unmodified	_SPIVVITVV_					0	0	0			REV__nc|ENSG00000134545|P26715-2|KLRC1	REV__nc|ENSG00000134545|P26715-2|KLRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8007507324219	2	463.799686	925.584819	-0.22039	-0.00010222	2.8768	0.0013343	2.6564	0.0012321	463.80077563915114	45.485	0.74849	45.417	45.021	45.77	-0.068634					44	18	3	0	0	0	0.7932	1	3276	3276		12.207	0.69583	1	207040	+		55185	19150	36818	36833	62488	62488					0.11905003113804469
SPKCSKHFH	9	Unmodified	_SPKCSKHFH_					0	0	0		nc|ENSG00000189292|Q6UX46-2|ALKAL2;ENSG00000189292|ENST00000403610|ALKAL2	nc|ENSG00000189292|Q6UX46-2|ALKAL2	nc|ENSG00000189292|Q6UX46-2|ALKAL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.3053588867188	2	535.763643	1069.51273	-0.95112	-0.00050958	-0.77992	-0.00041785	-1.731	-0.00092743	535.7631071369452	45.714	0.96307	46.609	45.842	46.805	0.89542					33	23	2	0	0	0	0.20789	1	4180	4180		21.96	0	1	231940			55186	8000	36819	36834	62489	62489					-0.019242345115344506
SPKGRIRS	8	Unmodified	_SPKGRIRS_					0	0	0			REV__ENST00000552577.5_1_12:49497599-49497758:-|nuORF	REV__ENST00000552577.5_1_12:49497599-49497758:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.7715148925781	2	450.772326	899.530098	-1.7269	-0.00077846	-1.6348	-0.00073693	-3.3617	-0.0015154	450.7714415756137	50.652	1.0483	50.652	49.971	51.02	0					43	26	2	0	0	0	0.87064	1	4070	4070		29.15	0	1	75712	+		55187	28629	36820	36835	62490	62490					0.07631429085745367
SPKGRIRS	8	Unmodified	_SPKGRIRS_					0	0	0			REV__ENST00000552577.5_1_12:49497599-49497758:-|nuORF	REV__ENST00000552577.5_1_12:49497599-49497758:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	450.772326	899.530098	-1.7269	-0.00077846	-1.6348	-0.00073693	-3.3617	-0.0015154	450.7714415756137	50.652	1.0483	50.652	49.971	51.02	0	0.04575	0.00061927	NaN	29.15	43	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75712	+		55188	28629	36820	36835							0.07631429085745367
SPKGRIRS	8	Unmodified	_SPKGRIRS_					0	0	0			REV__ENST00000552577.5_1_12:49497599-49497758:-|nuORF	REV__ENST00000552577.5_1_12:49497599-49497758:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	450.772326	899.530098	-1.319	-0.00059456	-3.6482	-0.0016445	-4.9672	-0.0022391	450.7713402544954	50.458	1.0332	50.487	49.908	50.941	0.029633	-0.11877	-0.0011959	NaN	29.15	43	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41633	+		55189	28629	36820	36835							0.07631429085745367
SPKGRIRS	8	Unmodified	_SPKGRIRS_					0	0	0			REV__ENST00000552577.5_1_12:49497599-49497758:-|nuORF	REV__ENST00000552577.5_1_12:49497599-49497758:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	450.772326	899.530098	0.30121	0.00013578	-4.1177	-0.0018562	-3.8165	-0.0017204	450.7704917005837	50.629	0.72826	50.679	50.146	50.874	0.049896	0.073019	-0.0016192	NaN	29.15	40	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74148	+		55190	28629	36820	36835							0.07631429085745367
SPKLPVRARVW	11	Unmodified	_SPKLPVRARVW_					0	0	0		ENST00000273308.8_2_12:56709842-56709944:-|nuORF	ENST00000273308.8_2_12:56709842-56709944:-|nuORF	ENST00000273308.8_2_12:56709842-56709944:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.9324035644531	3	436.934818	1307.78262	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.262	1	20.262	19.762	20.762	0								0	0	0	0.56276	1	478	478		22.562	7.2241	1				55191	9577	36821	36836	62491	62491					0.14104442096299863
SPLACCDV	8	Unmodified	_SPLACCDV_					0	0	0			REV__ENST00000434316.6_1_13:114149846-114149897:+|nuORF	REV__ENST00000434316.6_1_13:114149846-114149897:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.1706237792969	2	404.172407	806.330261	-1.8319	-0.00074042	-3.7939	-0.0015334	-5.6259	-0.0022738	404.17089024317255	78.364	3.0861	78.491	77.697	80.783	0.12695					160	99	2	0	0	0	0.85277	2	7350	7350;7411		31.955	4.9683	1	7642900	+		55192	26663	36822	36837	62492;62493	62492					-0.08065129968531437
SPLACCDV	8	Unmodified	_SPLACCDV_					0	0	0			REV__ENST00000434316.6_1_13:114149846-114149897:+|nuORF	REV__ENST00000434316.6_1_13:114149846-114149897:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.1700744628906	2	404.172407	806.330261	-1.5918	-0.00064335	-4.3613	-0.0017627	-5.953	-0.0024061	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.884	2	7353	7353;7379		40.573	12.318	1	6183600	+		55193	26663	36822	36837	62494;62495	62494					-0.08065129968531437
SPLEDIKQRKV	11	Unmodified	_SPLEDIKQRKV_					0	0	0		ENSG00000134897|ENST00000257336|BIVM	ENSG00000134897|ENST00000257336|BIVM	ENSG00000134897|ENST00000257336|BIVM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.25750732421875	3	438.257626	1311.75105	-2.0264	-0.0008881	2.1632	0.00094804	0.13677	5.994E-05	438.2585447663128	30.099	0.96018	30.099	29.739	30.699	0					100	33	5	0	0	0	0.72892	1	1378	1378		26.75	1.6237	1	863580			55194	3967	36823	36838	62496	62496					0.10764404551696316
SPLEPPMLDVA	11	Unmodified	_SPLEPPMLDVA_					0	0	0		ENSG00000064687|ENST00000263094|ABCA7;ENST00000526885.5_1_19:1041282-1042570:+|nuORF	ENSG00000064687|ENST00000263094|ABCA7	ENSG00000064687|ENST00000263094|ABCA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.29833984375	2	584.799557	1167.58456	-0.56859	-0.00033251	-3.3816	-0.0019776	-3.9502	-0.0023101	585.2975683106702	76.202	0.70881	76.602	76.201	76.909	0.3997					37	16	4	0	0	0	0.5603	1	8670	8670		47.657	5.2612	1	360490			55195	1108	36824	36839	62497	62497					0.0074721533162573905
SPLGGLLLL	9	Unmodified	_SPLGGLLLL_					0	0	0			REV__nc|ENSG00000184481|P98177-2|FOXO4	REV__nc|ENSG00000184481|P98177-2|FOXO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7863464355469	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.7932	1	2943	2943		8.2313	0.54101	1	12471000	+		55196	22685	36825	36840	62498	62498					0.11308733942325944
SPLGLCFF	8	Unmodified	_SPLGLCFF_					0	0	0			REV__chr5:139360109-139363759|23|15.22|0.83|4.2|+|1|TE_info:AluSx4,AluSx4_dup3468,Alu,SINE,donor,-,139359964,139360109|None,PAIP2|2	REV__chr5:139360109-139363759|23|15.22|0.83|4.2|+|1|TE_info:AluSx4,AluSx4_dup3468,Alu,SINE,donor,-,139359964,139360109|None,PAIP2|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7881774902344	2	442.222757	882.430961	-0.42881	-0.00018963	-2.4164	-0.0010686	-2.8452	-0.0012582	442.2212438614574	37.831	0.183	38.145	38.091	38.274	0.31312					5	4	2	0	0	0	0.4196	1	3079	3079		29.842	0	1	93053	+		55197	15849	36826	36841	62499	62499					-0.014957299233628873
SPLGLSPVL	9	Unmodified	_SPLGLSPVL_					0	0	0			REV__ENSG00000100368|ENST00000403662|CSF2RB	REV__ENSG00000100368|ENST00000403662|CSF2RB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.76812744140625	2	441.768386	881.522219	-0.15332	-6.7733E-05	-0.82572	-0.00036478	-0.97905	-0.00043251	441.76810949175115	107.35	0.84094	107.31	106.9	107.75	-0.034409					58	19	4	0	0	0	0.7932	1	11677	11677		24.203	0	1	1492500	+		55198	17183	36827	36842	62500	62500					0.07671857045602337
SPLGLVLAL	9	Unmodified	_SPLGLVLAL_					0	0	0		nc|ENSG00000110697|O00562-2|PITPNM1;ENSG00000110697|ENST00000356404|PITPNM1;ENST00000527370.5_1_11:67264693-67266053:-|nuORF	nc|ENSG00000110697|O00562-2|PITPNM1;ENST00000527370.5_1_11:67264693-67266053:-|nuORF	nc|ENSG00000110697|O00562-2|PITPNM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7880554199219	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.7932	1	2328	2328		26.796	1.3459	1	12467000			55199	2534;13285	36828	36843	62501	62501					0.11308733942303206
SPLHSALTV	9	Unmodified	_SPLHSALTV_					0	0	0			REV__CON__P01966	REV__CON__P01966	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	462.7599792480469	2	462.761092	923.507631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.086	1	48.108	47.608	48.608	0.02227								0	0	0	0.32039	1	3639	3639		44.117	1.6423	1		+	+	55200	15974	36829	36844	62502	62502					0.04281784897455054
SPLILKEL	8	Unmodified	_SPLILKEL_					0	0	0			REV__ENSG00000238083|ENST00000576629|LRRC37A2	REV__ENSG00000238083|ENST00000576629|LRRC37A2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7924499511719	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.723	1	49.72	49.22	50.22	-0.0030327								0	0	0	0.29755	1	4174	4174		24.203	0	1		+		55201	22141	36830	36845	62503	62503					0.10984716596760791
SPLKILHAPMA	11	Unmodified	_SPLKILHAPMA_					0	0	0		ENST00000546378.1_1_12:54370099-54370336:+|nuORF	ENST00000546378.1_1_12:54370099-54370336:+|nuORF	ENST00000546378.1_1_12:54370099-54370336:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3425903320312	2	589.341726	1176.6689	2.2135	0.0013045	-0.53137	-0.00031316	1.6821	0.00099136	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.6921	1	9785	9785		32.812	5.7651	1	5579200			55202	13589	36831	36846	62504	62504					0.08763210939059718
SPLKLVRLQR	10	Unmodified	_SPLKLVRLQR_					0	0	0			REV__chr4:56436328-56446695|31|10.06|0.05|7.72|+|0|PAICS,PAICS|2	REV__chr4:56436328-56446695|31|10.06|0.05|7.72|+|0|PAICS,PAICS|2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	605.3912963867188	2	605.393139	1208.77173	-1.0119	-0.00061261	-4.4795	-0.0027118	-5.4914	-0.0033244	605.3903055636187	44.786	1.0425	44.786	44.46	45.502	0					57	25	3	0	0	0	0.86047	1	3277	3277		23.523	1.5628	1	158280	+		55203	15833	36832	36847	62505	62505					0.17569039722025082
SPLLLPAVG	9	Unmodified	_SPLLLPAVG_					0	0	0			REV__ENST00000290573.6_1_2:75119969-75120071:+|nuORF	REV__ENST00000290573.6_1_2:75119969-75120071:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.77117919921875	2	433.770929	865.527304	1.1273	0.000489	3.9094	0.0016958	5.0367	0.0021848	433.77107498521286	32.677	1.3148	32.889	32.337	33.651	0.21168					85	30	4	0	0	0	0.7932	1	2320	2320		20.482	2.1574	1	1051100	+		55204	24658	36833	36848	62506	62506					0.08916160908233906
SPLLSFLYLLF	11	Unmodified	_SPLLSFLYLLF_					0	0	0		chr2:162306855-162308907|24|19.17|0.56|5.11|-|0|TE_info:MLT1B-int,MLT1B-int_dup75,ERVL-MaLR,LTR,donor,-,162308907,162309272|IFIH1,None|3	chr2:162306855-162308907|24|19.17|0.56|5.11|-|0|TE_info:MLT1B-int,MLT1B-int_dup75,ERVL-MaLR,LTR,donor,-,162308907,162309272|IFIH1,None|3	chr2:162306855-162308907|24|19.17|0.56|5.11|-|0|TE_info:MLT1B-int,MLT1B-int_dup75,ERVL-MaLR,LTR,donor,-,162308907,162309272|IFIH1,None|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.5924072265625	3	438.256564	1311.74786	0.21129	9.2599E-05	2.5281	0.001108	2.7394	0.0012006	438.2576083423229	29.948	1.2574	29.973	29.652	30.909	0.025013					91	35	4	0	0	0	0.76579	1	1617	1617		18.531	2.6104	1	433100			55205	310	36834	36849	62507	62507					0.10445761444975687
SPLLVGLSD	9	Unmodified	_SPLLVGLSD_					0	0	0		ENST00000512163.5_1_5:162864615-162864786:+|nuORF	ENST00000512163.5_1_5:162864615-162864786:+|nuORF	ENST00000512163.5_1_5:162864615-162864786:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.75439453125	2	450.755475	899.496398	0.64847	0.0002923	-3.528	-0.0015903	-2.8795	-0.001298	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.78536	1	7879	7879		29.15	6.1071	1	162850			55206	13032	36835	36850	62508	62508					0.04262962803340997
SPLPILELT	9	Unmodified	_SPLPILELT_					0	0	0		nc|ENSG00000132128|Q15345-3|LRRC41;ENSG00000132128|ENST00000617190|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7961120605469	2	491.794601	981.574648	0.13478	6.6286E-05	1.7464	0.00085886	1.8812	0.00092515	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.76764	1	5673	5673		34.173	5.0025	1	176030			55207	3765	36836	36851	62509	62509					0.08312395388554705
SPLREFRNKR	10	Unmodified	_SPLREFRNKR_					0	0	0		ENST00000429642.1_3_10:1094364-1094499:-|nuORF	ENST00000429642.1_3_10:1094364-1094499:-|nuORF	ENST00000429642.1_3_10:1094364-1094499:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.9180603027344	3	434.917827	1301.73165	-0.36353	-0.00015811	0.48253	0.00020986	0.119	5.1755E-05	434.91789578026726	26.856	0.76407	26.681	26.341	27.105	-0.17559					25	16	2	0	0	0	0.86225	2	1500	1500;1513		32.751	2.1817	1	196960			55208	11611	36837	36852	62510;62511	62510					0.09285493051447702
SPLREFRNKR	10	Unmodified	_SPLREFRNKR_					0	0	0		ENST00000429642.1_3_10:1094364-1094499:-|nuORF	ENST00000429642.1_3_10:1094364-1094499:-|nuORF	ENST00000429642.1_3_10:1094364-1094499:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	434.917827	1301.73165	2.1752	0.00094602	-2.0934	-0.00091046	0.081751	3.5555E-05	434.91689881423304	26.87	0.62883	26.53	26.141	26.77	-0.34035	-0.075264	-0.0013958	NaN	32.751	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107870			55209	11611	36837	36852							0.09285493051447702
SPLRPLKCL	9	Unmodified	_SPLRPLKCL_					0	0	0			REV__ENST00000313050.11_1_9:139342041-139342092:-|nuORF	REV__ENST00000313050.11_1_9:139342041-139342092:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8087158203125	2	513.810062	1025.60557	0.090876	4.6693E-05	-2.2226	-0.001142	-2.1317	-0.0010953	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.7932	1	4210	4210		24.203	1.1603	1	1448700	+		55210	24920	36838	36853	62512	62512					0.09379270221802471
SPLRPLKCL	9	Unmodified	_SPLRPLKCL_					0	0	0			REV__ENST00000313050.11_1_9:139342041-139342092:-|nuORF	REV__ENST00000313050.11_1_9:139342041-139342092:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.8086547851562	2	513.810062	1025.60557	0.49949	0.00025664	-2.7295	-0.0014024	-2.23	-0.0011458	513.8085653001988	50.032	1.4786	50.48	49.777	51.256	0.4476					85	35	3	0	0	0	0.77244	1	4885	4885		32.812	4.9302	1	1418300	+		55211	24920	36838	36853	62513	62513					0.09379270221802471
SPLSRLPI	8	Unmodified	_SPLSRLPI_					0	0	0		ENSG00000157613|ENST00000621158|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7881774902344	2	441.774003	881.533452	-0.4991	-0.00022049	1.9284	0.00085191	1.4293	0.00063142	441.77510224804115	37.982	0.68754	38.295	37.942	38.629	0.31312					31	17	3	0	0	0	0.4196	1	3079	3079		18.324	0	1	783570			55212	5441	36839	36854	62514	62514					0.08794679139748496
SPLTEPLIL	9	Unmodified	_SPLTEPLIL_					0	0	0		ENSG00000205744|ENST00000381480|DENND1C;nc|ENSG00000205744|Q8IV53-2|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958984375	2	491.794601	981.574648	-1.4864	-0.00073099	4.0311	0.0019825	2.5447	0.0012515	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.7932	1	4536	4536		17.365	0	1	781720			55213	8539	36840	36855	62515	62515					0.08312395388577443
SPLTEPLIL	9	Unmodified	_SPLTEPLIL_					0	0	0		ENSG00000205744|ENST00000381480|DENND1C;nc|ENSG00000205744|Q8IV53-2|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7956237792969	2	491.794601	981.574648	-0.75954	-0.00037354	2.9319	0.0014419	2.1724	0.0010684	491.7959244094971	46.601	1.9125	46.572	45.843	47.756	-0.028782					158	52	4	0	0	0	0.7932	1	3894	3894		21.96	2.5999	1	3015000			55214	8539	36840	36855	62516	62516					0.08312395388577443
SPLTEPLIL	9	Unmodified	_SPLTEPLIL_					0	0	0		ENSG00000205744|ENST00000381480|DENND1C;nc|ENSG00000205744|Q8IV53-2|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79644775390625	2	491.794601	981.574648	-0.67834	-0.0003336	2.9863	0.0014686	2.3079	0.001135	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.78536	1	4034	4034		29.15	3.6994	1	1111900			55215	8539	36840	36855	62517	62517					0.08312395388577443
SPLTEPLIL	9	Unmodified	_SPLTEPLIL_					0	0	0		ENSG00000205744|ENST00000381480|DENND1C;nc|ENSG00000205744|Q8IV53-2|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7961730957031	2	491.794601	981.574648	-0.71044	-0.00034939	3.0101	0.0014803	2.2996	0.001131	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.78536	1	3992	3992		29.15	2.3535	1	571510			55216	8539	36840	36855	62518	62518					0.08312395388577443
SPLTEPLIL	9	Unmodified	_SPLTEPLIL_					0	0	0		ENSG00000205744|ENST00000381480|DENND1C;nc|ENSG00000205744|Q8IV53-2|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7950134277344	2	491.794601	981.574648	-0.12437	-6.1163E-05	2.2976	0.00113	2.1732	0.0010688	491.7955803973609	45.417	1.3583	45.348	44.556	45.914	-0.06863					81	33	3	0	0	0	0.78536	1	3204	3204		29.15	3.6994	1	439300			55217	8539	36840	36855	62519	62519					0.08312395388577443
SPLTEPLIL	9	Unmodified	_SPLTEPLIL_					0	0	0		ENSG00000205744|ENST00000381480|DENND1C;nc|ENSG00000205744|Q8IV53-2|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	ENSG00000205744|ENST00000381480|DENND1C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7958068847656	2	491.794601	981.574648	-0.16137	-7.9361E-05	2.6017	0.0012795	2.4403	0.0012001	491.795730554191	52.394	1.7298	53.062	52.517	54.247	0.6673					112	41	4	0	0	0	0.77244	1	5355	5355		32.812	2.3088	1	2437000			55218	8539	36840	36855	62520	62520					0.08312395388577443
SPLTLISSL	9	Unmodified	_SPLTLISSL_					0	0	0			REV__CON__Q05B55	REV__CON__Q05B55	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.777587890625	2	465.778951	929.543348	-1.5315	-0.00071332	-1.4276	-0.00066492	-2.959	-0.0013782	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.7932	1	7741	7741		26.693	2.1889	1	991370	+	+	55219	15994	36841	36856	62521	62521					0.07575822354476713
SPLTVALLL	9	Unmodified	_SPLTVALLL_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8008117675781	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	1	2798	2798		24.203	4.8428	1	489490	+		55220	21535	36842	36857	62522	62522					0.11905003113804469
SPLTVALLL	9	Unmodified	_SPLTVALLL_					0	0	0			REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	REV__nc|ENSG00000168936|A0AVI4-2|TMEM129	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.7994079589844	2	463.799686	925.584819	-1.356	-0.00062891	2.7368	0.0012693	1.3808	0.00064042	463.8008126700971	41.516	1.4901	41.52	41.125	42.615	0.003418					87	36	3	0	0	0	0.7932	1	3043	3043		18.324	0.95945	1	533600	+		55221	21535	36842	36857	62523	62523					0.11905003113804469
SPLVLKHH	8	Unmodified	_SPLVLKHH_					0	0	0			REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF	REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77764892578125	2	465.779619	929.544686	-1.4399	-0.00067067	-2.9942	-0.0013946	-4.4341	-0.0020653	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.81548	1	7611	7611		20.482	0.48506	1	287800	+		55222	19933	36843	36858	62524	62524					0.07709501233887295
SPMARPLVP	9	Unmodified	_SPMARPLVP_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-3|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-3|HDAC5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.23614501953125	2	484.273312	966.532072	0.2157	0.00010446	-3.0428	-0.0014735	-2.8271	-0.0013691	484.27212627247394	86.153	0.24202	86.596	86.409	86.651	0.44331					8	5	2	0	0	0	0.20789	1	10069	10069		60.972	22.166	1	101820	+		55223	17736	36844	36859	62525	62525					0.047467217793496275
SPMDIFDMF	9	Oxidation (M)	_SPMDIFDM(Oxidation (M))F_		SPMDIFDM(1)F		SPM(-54)DIFDM(54)F	0	0	1		ENSG00000086061|ENST00000330899|DNAJA1;nc|ENSG00000086061|P31689-2|DNAJA1;nc|ENSG00000140403|Q8WW22-2|DNAJA4;ENSG00000140403|ENST00000394852|DNAJA4;nc|ENSG00000140403|Q8WW22-3|DNAJA4;ENST00000485075.1_1_15:78562865-78566840:+|nuORF	ENSG00000086061|ENST00000330899|DNAJA1	ENSG00000086061|ENST00000330899|DNAJA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.7301025390625	2	559.730286	1117.44602	2.1754	0.0012176	-1.8944	-0.0010604	0.28097	0.00015727	559.7288488445067	100.91	0.58739	101.21	100.85	101.44	0.2999					34	14	3	0	0	0	0.22631	2	12234	12234;12248		71.296	23.38	2	512190			55224	1551	36845	36860	62526;62527	62526		34			-0.10800650908345233
SPMDIFDMF	9	Oxidation (M)	_SPMDIFDM(Oxidation (M))F_		SPMDIFDM(1)F		SPM(-86)DIFDM(86)F	0	0	1		ENSG00000086061|ENST00000330899|DNAJA1;nc|ENSG00000086061|P31689-2|DNAJA1;nc|ENSG00000140403|Q8WW22-2|DNAJA4;ENSG00000140403|ENST00000394852|DNAJA4;nc|ENSG00000140403|Q8WW22-3|DNAJA4;ENST00000485075.1_1_15:78562865-78566840:+|nuORF	ENSG00000086061|ENST00000330899|DNAJA1	ENSG00000086061|ENST00000330899|DNAJA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.73046875	2	559.730286	1117.44602	2.4477	0.00137	-2.4758	-0.0013858	-0.028157	-1.576E-05	559.72877181329	100.94	0.58577	101.29	100.94	101.52	0.34591					34	14	4	0	0	0	0.09311	2	12278	12278;12289		94.006	28.203	2	566440			55225	1551	36845	36860	62528;62529	62528		34			-0.10800650908345233
SPNGSGCGE	9	Unmodified	_SPNGSGCGE_					0	0	0			REV__ENST00000573989.1_1_17:7834648-7835228:-|nuORF	REV__ENST00000573989.1_1_17:7834648-7835228:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.1700744628906	2	404.150517	806.286482	-0.23915	-9.6654E-05	-3.4704	-0.0014026	-3.7095	-0.0014992	404.14954947323713	77.792	0.3627	78.36	78.098	78.461	0.56836					11	8	2	0	0	0	0.20789	1	8890	8890		26.693	3.6504	1	112600	+		55226	28965	36846	36861	62530	62530					-0.12441023141298047
SPNIGILTI	9	Unmodified	_SPNIGILTI_					0	0	0			REV__ENSG00000280090|ENST00000356130|OR8B4	REV__ENSG00000280090|ENST00000356130|OR8B4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7356872558594	2	464.279118	926.543683	-1.9588	-0.00090942	-1.3807	-0.00064102	-3.3395	-0.0015504	464.2782745100043	43.328	0.91542	44.101	43.708	44.624	0.77379					49	22	3	0	0	0	0.20789	1	3968	3968		16.473	10.552	1	992740	+		55227	24044	36847	36862	62531	62531					0.07747242074333371
SPNPINAMQT	10	Unmodified	_SPNPINAMQT_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	536.7551879882812	2	536.758223	1071.50189	0.051955	2.7887E-05	-2.8568	-0.0015334	-2.8048	-0.0015055	536.7558022502886	37.839	0.72968	37.815	37.573	38.302	-0.023979					32	16	3	0	0	0	0.80179	1	2540	2540		39.253	0.44669	1	281640			55228	1405	36848	36863	62532	62532					-0.030996816764854884
SPNPSRPPPT	10	Unmodified	_SPNPSRPPPT_					0	0	0			REV__ENST00000591205.1_1_19:33457264-33462774:-|nuORF	REV__ENST00000591205.1_1_19:33457264-33462774:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.2971801757812	2	525.272355	1048.53016	-0.55748	-0.00029283	4.3104	0.0022641	3.7529	0.0019713	525.27403713205	57.706	0.15335	58.1	58.043	58.196	0.39407					5	3	2	0	0	0	0.37624	1	6007	6007		39.253	13.803	1	90166	+		55229	18449	36849	36864	62533	62533					0.00783384295095857
SPPAPPTQPL	10	Unmodified	_SPPAPPTQPL_					0	0	0		ENST00000380817.7_1_22:50883674-50883944:-|nuORF	ENST00000380817.7_1_22:50883674-50883944:-|nuORF	ENST00000380817.7_1_22:50883674-50883944:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	502.81414794921875	2	502.7742	1003.53385	-0.084427	-4.2448E-05	4.4178	0.0022211	4.3333	0.0021787	502.77685314169787	97.263	0.92382	97.312	96.914	97.837	0.048157					25	21	2	0	0	0	0.37624	1	10402	10402		51.193	15.574	1	65491			55230	10935	36850	36865	62534	62534					0.032220540689422705
SPPARLAPA	9	Unmodified	_SPPARLAPA_					0	0	0			REV__chr8:79767294-79767419|22|10.18|0.35|4.85|-|ENST00000674418|HEY1,HEY1	REV__chr8:79767294-79767419|22|10.18|0.35|4.85|-|ENST00000674418|HEY1,HEY1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2558898925781	2	440.255977	878.497401	0.6738	0.00029664	-1.6208	-0.00071356	-0.94699	-0.00041692	440.2552029440019	56.238	1.654	56.797	56.541	58.195	0.55953					66	39	3	0	0	0	0.7932	1	5840	5840		24.203	0	1	2122700	+		55231	15926	36851	36866	62535	62535					0.053292219628815474
SPPARRGRLL	10	Unmodified	_SPPARRGRLL_					0	0	0			REV__ENST00000298310.9_1_14:50319457-50319715:-|nuORF	REV__ENST00000298310.9_1_14:50319457-50319715:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	561.8458862304688	2	561.846356	1121.67816	2.4941	0.0014013	-3.582	-0.0020125	-1.0879	-0.00061123	561.8441612955584	96.954	2.2732	96.898	96.37	98.643	-0.056381					143	52	5	0	0	0	0.67571	1	10428	10428		45.972	7.1661	1	1709600	+		55232	24732	36852	36867	62536	62536					0.12218740339608303
SPPEKPNGIII	11	Unmodified	_SPPEKPNGIII_					0	0	0		ENSG00000139304|ENST00000644991|PTPRQ;nc|ENSG00000139304|Q9UMZ3|PTPRQ	ENSG00000139304|ENST00000644991|PTPRQ	ENSG00000139304|ENST00000644991|PTPRQ	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	583.334228515625	2	582.834788	1163.65502	-0.40612	-0.0002367	-3.2681	-0.0019048	-3.6742	-0.0021415	582.832911894326	94.456	2.7605	94.456	93.622	96.382	0					111	64	3	0	0	0	0.69248	1	9321	9321		32.751	2.4328	1	367730			55233	4360	36853	36868	62537	62537					0.07974256711622729
SPPEKPNGIII	11	Unmodified	_SPPEKPNGIII_					0	0	0		ENSG00000139304|ENST00000644991|PTPRQ;nc|ENSG00000139304|Q9UMZ3|PTPRQ	ENSG00000139304|ENST00000644991|PTPRQ	ENSG00000139304|ENST00000644991|PTPRQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.83251953125	2	582.834788	1163.65502	0.11318	6.5963E-05	-3.7555	-0.0021889	-3.6424	-0.0021229	582.8325626554922	94.252	3.4585	94.298	93.323	96.781	0.046173					208	81	3	0	0	0	0.51007	1	9866	9866		51.193	7.0759	1	743970			55234	4360	36853	36868	62538	62538					0.07974256711622729
SPPGSIRKPPN	11	Unmodified	_SPPGSIRKPPN_					0	0	0		ENSG00000132478|ENST00000589666|UNK	ENSG00000132478|ENST00000589666|UNK	ENSG00000132478|ENST00000589666|UNK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8429565429688	2	575.32238	1148.63021	2.0603	0.0011854	-1.9042	-0.0010955	0.15611	8.9811E-05	575.3213296175255	94.286	1.0604	94.227	93.29	94.35	-0.059212					42	24	2	0	0	0	0.17527	1	9943	9943		40.058	24.416	1	229180			55235	3800	36854	36869	62539	62539					0.061836216289066215
SPPLARSR	8	Unmodified	_SPPLARSR_					0	0	0		ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.24041748046875	2	442.259051	882.503549	-1.2441	-0.00055023	1.8955	0.00083828	0.65133	0.00028805	442.25988262070433	83.571	1.6866	83.571	83.057	84.744	0					48	41	2	0	0	0	0.4196	1	7773	7773		14.865	0	1	54108			55236	10991	36855	36870	62540	62540					0.05759740194423557
SPPLEKNPPTT	11	Unmodified	_SPPLEKNPPTT_					0	0	0			REV__nc|ENSG00000047849|P27816-3|MAP4;REV__nc|ENSG00000047849|P27816-6|MAP4	REV__nc|ENSG00000047849|P27816-6|MAP4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8662719726562	2	590.814053	1179.61355	-0.64466	-0.00038087	3.5523	0.0020987	2.9076	0.0017179	590.8163424846553	103.82	0.40573	103.81	103.67	104.07	-0.0035782					14	9	2	0	0	0	0.17424	1	11206	11206		53.089	0	1	99931	+		55237	29685;29684	36856	36871	62541	62541					0.03093075952278923
SPPLVPLLRS	10	Unmodified	_SPPLVPLLRS_					0	0	0			REV__ENST00000419804.5_3_X:152937579-152953009:-|nuORF	REV__ENST00000419804.5_3_X:152937579-152953009:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	539.8321533203125	2	539.834591	1077.65463	-0.61983	-0.00033461	-3.2209	-0.0017387	-3.8407	-0.0020733	539.832722847018	95.45	1.7138	95.45	94.923	96.637	0					80	39	3	0	0	0	0.86348	1	9490	9490		31.53	1.0262	1	535420	+		55238	26479	36857	36872	62542	62542					0.11890881782414908
SPPPNLKPITT	11	Unmodified	_SPPPNLKPITT_					0	0	0			REV__nc|ENSG00000264204|Q5VUJ5|AGAP7P	REV__nc|ENSG00000264204|Q5VUJ5|AGAP7P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.8331909179688	2	582.834788	1163.65502	-1.3452	-0.00078404	-2.3068	-0.0013445	-3.6521	-0.0021286	582.8334573704366	94.259	3.5437	94.457	93.113	96.657	0.19827					191	84	3	0	0	0	0.7434	1	9592	9592		23.523	2.5758	1	775360	+		55239	30254	36858	36873	62543	62543					0.07974256711599992
SPPRFLRG	8	Unmodified	_SPPRFLRG_					0	0	0			REV__ENSG00000196449|ENST00000373044|YRDC	REV__ENSG00000196449|ENST00000373044|YRDC	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2678527832031	2	465.269419	928.524284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.698	1	80.698	80.198	81.198	0								0	0	0	0.29596	1	7458	7458		35.618	3.6634	1		+		55240	23133	36859	36874	62544	62544					0.05716330574091444
SPPSCPPH	8	Unmodified	_SPPSCPPH_					0	0	0		ENSG00000110799|ENST00000261405|VWF	ENSG00000110799|ENST00000261405|VWF	ENSG00000110799|ENST00000261405|VWF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.185791015625	2	411.184163	820.353773	3.4126	0.0014032	0.82253	0.00033821	4.2351	0.0017414	411.18475488021454	103.97	1.5243	104.24	103.89	105.41	0.26524					73	36	3	0	0	0	0.86791	1	12717	12717		28.254	5.2118	1	843650			55241	2543	36860	36875	62545	62545					-0.0635894813970026
SPPSSKRPK	9	Unmodified	_SPPSSKRPK_					0	0	0		nc|ENSG00000147862|O00712-4|NFIB;chr9:14179780-14300186|49|10.86|0.29|5.25|-|ENST00000636735|NFIB,NFIB;nc|ENSG00000147862|O00712-6|NFIB;nc|ENSG00000147862|O00712|NFIB;chr9:14088326-14093460|58|16.78|0.84|4.31|-|ENST00000637742|NFIB,NFIB;chr9:14307520-14307920|44|17.95|0.2|6.48|-|ENST00000637640|NFIB,NFIB;ENSG00000147862|ENST00000380953|NFIB;chr9:14307520-14321941|50|13.12|0.29|5.52|-|ENST00000646622|NFIB,NFIB	nc|ENSG00000147862|O00712-4|NFIB	nc|ENSG00000147862|O00712-4|NFIB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.29022216796875	2	492.285266	982.555979	1.6804	0.00082722	1.7616	0.0008672	3.442	0.0016944	492.28670249740594	110.53	1.1679	110.59	110.07	111.24	0.054062					79	40	3	0	0	0	0.69624	1	13371	13371		40.778	7.9657	1	260830			55242	14981	36861	36876	62546	62546					0.06400278537375925
SPPVRRAS	8	Unmodified	_SPPVRRAS_					0	0	0			REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25238037109375	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.86677	1	8339	8339		27.882	1.0861	1	3292300	+		55243	25131	36862	36877	62547	62547					0.04839453677379879
SPPVRRAS	8	Unmodified	_SPPVRRAS_					0	0	0			REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2525329589844	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.82658	1	7965	7965		21.96	0.25755	1	3322700	+		55244	25131	36862	36877	62548	62548					0.04839453677379879
SPPVRRAS	8	Unmodified	_SPPVRRAS_					0	0	0			REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2524108886719	2	435.251226	868.487899	-1.537	-0.000669	1.6001	0.00069643	0.063016	2.7428E-05	435.2518483388684	92.775	1.5014	93.001	92.492	93.993	0.22547					88	35	3	0	0	0	0.86677	1	9398	9398		27.882	1.0861	1	621730	+		55245	25131	36862	36877	62549	62549					0.04839453677379879
SPPVRRAS	8	Unmodified	_SPPVRRAS_					0	0	0			REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	435.251226	868.487899	-1.1061	-0.00048143	1.1871	0.00051667	0.080963	3.5239E-05	435.2516688804781	93.233	1.4228	93.233	92.721	94.144	0	0.16446	0.00091821	NaN	27.882	80	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	477960	+		55246	25131	36862	36877							0.04839453677379879
SPPVRRAS	8	Unmodified	_SPPVRRAS_					0	0	0			REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	435.251226	868.487899	-0.16511	-7.1865E-05	0.27086	0.00011789	0.10575	4.6027E-05	435.25126703319626	93.058	1.7253	93.128	92.541	94.266	0.06987	0.059811	0.00012065	NaN	27.882	99	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	726460	+		55247	25131	36862	36877							0.04839453677379879
SPPVRRAS	8	Unmodified	_SPPVRRAS_					0	0	0			REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	435.251226	868.487899	1.6601	0.00072257	-1.6819	-0.00073205	-0.021767	-9.474E-06	435.25040422889157	93.013	2.1505	92.951	91.863	94.014	-0.06144	-0.11691	-0.0015792	NaN	27.882	107	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	812220	+		55248	25131	36862	36877							0.04839453677379879
SPPVRRAS	8	Unmodified	_SPPVRRAS_					0	0	0			REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	435.251226	868.487899	-1.537	-0.000669	1.6001	0.00069643	0.063016	2.7428E-05	435.2518483388684	92.775	1.5014	93.001	92.492	93.993	0.22547	-0.067495	0.0012777	NaN	27.882	88	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	621730	+		55249	25131	36862	36877							0.04839453677379879
SPPVRRAS	8	Unmodified	_SPPVRRAS_					0	0	0			REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	435.251226	868.487899	0.66543	0.00028963	-0.65783	-0.00028632	0.0075953	3.3059E-06	435.25086537671535	92.878	1.8881	93.037	92.113	94.001	0.15874	-0.031232	-0.00068778	NaN	27.882	97	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	593450	+		55250	25131	36862	36877							0.04839453677379879
SPPVRRAS	8	Unmodified	_SPPVRRAS_					0	0	0			REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	435.251226	868.487899	-1.8231	-0.0007935	1.8817	0.000819	0.058598	2.5505E-05	435.2519402158357	92.844	2.112	93.036	91.923	94.035	0.19239	-0.031782	0.0015229	NaN	27.882	96	49	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	470530	+		55251	25131	36862	36877							0.04839453677379879
SPPVRRAS	8	Unmodified	_SPPVRRAS_					0	0	0			REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	REV__ENST00000331677.7_1_6:116691638-116720414:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	435.251226	868.487899	1.0668	0.00046434	-0.89122	-0.0003879	0.17561	7.6435E-05	435.250771366413	92.701	1.0063	93.148	92.733	93.739	0.44661	0.079416	-0.00089094	NaN	27.882	47	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	284480	+		55252	25131	36862	36877							0.04839453677379879
SPQPEELH	8	Unmodified	_SPQPEELH_					0	0	0		ENSG00000167548|ENST00000301067|KMT2D;nc|ENSG00000167548|O14686-3|KMT2D	ENSG00000167548|ENST00000301067|KMT2D	ENSG00000167548|ENST00000301067|KMT2D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.722900390625	2	468.724707	935.43486	-1.001	-0.0004692	-2.092	-0.00098057	-3.093	-0.0014498	468.7237111234843	78.023	1.0772	78.15	77.878	78.955	0.12695					84	33	4	0	0	0	0.85277	1	7332	7332		25.45	4.9683	1	786850			55253	6301	36863	36878	62550	62550					-0.03543968895951366
SPQPGQGH	8	Unmodified	_SPQPGQGH_					0	0	0		ENSG00000126705|ENST00000673934|AHDC1	ENSG00000126705|ENST00000673934|AHDC1	ENSG00000126705|ENST00000673934|AHDC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.17022705078125	2	404.190834	806.367115	0.5314	0.00021479	-1.9757	-0.00079854	-1.4443	-0.00058375	404.19006565769	78.247	0.53862	78.384	78.254	78.793	0.13667					18	15	2	0	0	0	0.4196	1	7374	7374		40.573	1.7665	1	53622			55254	3460	36864	36879	62551	62551					-0.04381374036097441
SPQPKKKPL	9	Unmodified	_SPQPKKKPL_					0	0	0		nc|ENSG00000141510|P04637-8|TP53;nc|ENSG00000141510|P04637-9|TP53;nc|ENSG00000141510|P04637-7|TP53;chr17:7675236-7676382|56|16.55|0.8|4.36|-|ENST00000514944|TP53,TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;ENSG00000141510|ENST00000269305|TP53;chr17:7676622-7677325|50|11.2|0.15|6.25|-|ENST00000508793|TP53,TP53	nc|ENSG00000141510|P04637-8|TP53	nc|ENSG00000141510|P04637-8|TP53	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.82037353515625	2	511.821484	1021.62842	0.38256	0.0001958	0.28942	0.00014813	0.67197	0.00034393	511.82040803634396	77.62	0.82594	78.025	77.72	78.546	0.40531					40	19	4	0	0	0	0.64922	1	8838	8838		44.117	10.601	1	346590			55255	243	36865	36880	62552	62552					0.11846612610952434
SPQTEREL	8	Unmodified	_SPQTEREL_					0	0	0			REV__ENSG00000197299|ENST00000355112|BLM	REV__ENSG00000197299|ENST00000355112|BLM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.2430114746094	2	480.243264	958.471974	0.093776	4.5035E-05	-0.35976	-0.00017277	-0.26598	-0.00012773	480.2429209398555	32.615	0.74674	32.626	32.298	33.044	0.010899					34	18	3	0	0	0	0.90837	1	1848	1848		56.721	5.3856	1	131240	+		55256	23217	36866	36881	62553	62553					-0.008922973501853448
SPQVTRILPCL	11	Carbamidomethyl (C)	_SPQVTRILPC(Carbamidomethyl (C))L_	SPQVTRILPC(1)L		SPQVTRILPC(49)L		0	1	0		ENST00000496524.5_1_2:110902031-110920682:-|nuORF;nc|ENSG00000144061|O15259-3|NPHP1;ENSG00000144061|ENST00000445609|NPHP1;nc|ENSG00000144061|O15259|NPHP1;nc|ENSG00000144061|O15259-4|NPHP1	ENST00000496524.5_1_2:110902031-110920682:-|nuORF	ENST00000496524.5_1_2:110902031-110920682:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.3636474609375	2	642.360647	1282.70674	0.94244	0.00060538	1.7107	0.0010989	2.6532	0.0017043	642.3626446280917	111.26	0.57246	111.33	110.96	111.53	0.069542					80	21	4	0	0	0	0.53495	1	11960	11960		49.442	7.0454	1	3156600			55257	4687	36867	36882	62554	62554	62				0.07669677133867481
SPQVTRILPCL	11	Carbamidomethyl (C)	_SPQVTRILPC(Carbamidomethyl (C))L_	SPQVTRILPC(1)L		SPQVTRILPC(53)L		0	1	0		ENST00000496524.5_1_2:110902031-110920682:-|nuORF;nc|ENSG00000144061|O15259-3|NPHP1;ENSG00000144061|ENST00000445609|NPHP1;nc|ENSG00000144061|O15259|NPHP1;nc|ENSG00000144061|O15259-4|NPHP1	ENST00000496524.5_1_2:110902031-110920682:-|nuORF	ENST00000496524.5_1_2:110902031-110920682:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3631591796875	2	642.360647	1282.70674	2.0884	0.0013415	1.5458	0.00099296	3.6342	0.0023344	642.3616530079581	111.61	0.45724	111.65	111.39	111.85	0.041832					30	15	2	0	0	0	0.48529	1	13514	13514		52.937	7.9145	1	12688000			55258	4687	36867	36882	62555	62555	62				0.07669677133867481
SPQVTRILPCL	11	Carbamidomethyl (C)	_SPQVTRILPC(Carbamidomethyl (C))L_	SPQVTRILPC(1)L		SPQVTRILPC(44)L		0	1	0		ENST00000496524.5_1_2:110902031-110920682:-|nuORF;nc|ENSG00000144061|O15259-3|NPHP1;ENSG00000144061|ENST00000445609|NPHP1;nc|ENSG00000144061|O15259|NPHP1;nc|ENSG00000144061|O15259-4|NPHP1	ENST00000496524.5_1_2:110902031-110920682:-|nuORF	ENST00000496524.5_1_2:110902031-110920682:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.3638916015625	2	642.360647	1282.70674	2.0883	0.0013414	1.0062	0.00064635	3.0945	0.0019878	642.3608064218109	112.21	4.9435	112.24	112.06	117	0.030602					291	230	2	0	0	0	0.60058	1	13553	13553		44.377	11.565	1	12073000			55259	4687	36867	36882	62556	62556	62				0.07669677133867481
SPRARVTP	8	Unmodified	_SPRARVTP_					0	0	0		ENST00000540458.5_1_12:6950163-6950600:+|nuORF	ENST00000540458.5_1_12:6950163-6950600:+|nuORF	ENST00000540458.5_1_12:6950163-6950600:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24041748046875	2	442.259051	882.503549	-1.6345	-0.00072286	1.9371	0.00085671	0.30265	0.00013385	442.25965935609554	83.082	1.3393	83.208	82.827	84.167	0.12601					39	30	2	0	0	0	0.4196	1	7945	7945		39.253	11.371	1	74016			55260	13497	36868	36883	62557	62557					0.05759740194423557
SPRGSPRL	8	Unmodified	_SPRGSPRL_					0	0	0			REV__nc|ENSG00000272391|A8CG34|POM121C	REV__nc|ENSG00000272391|A8CG34|POM121C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25189208984375	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.89043	1	7300	7300		35.618	1.4457	1	2494100	+		55261	30262	36869	36884	62558	62558					0.048394536773685104
SPRHTEILEM	10	Unmodified	_SPRHTEILEM_					0	0	0			REV__nc|ENSG00000236320|P0C7P3-2|SLFN14	REV__nc|ENSG00000236320|P0C7P3-2|SLFN14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.3184204101562	2	606.805705	1211.59686	-0.28848	-0.00017505	1.949	0.0011827	1.6605	0.0010076	606.8068158359474	61.71	1.7377	62.098	61.708	63.446	0.38846					48	39	2	0	0	0	0.37624	1	6761	6761		29.17	1.0886	1	240310	+		55262	23789	36870	36885	62559	62559					-0.0004774820531565638
SPRHTEILEM	10	Unmodified	_SPRHTEILEM_					0	0	0			REV__nc|ENSG00000236320|P0C7P3-2|SLFN14	REV__nc|ENSG00000236320|P0C7P3-2|SLFN14	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	606.805705	1211.59686	-0.081335	-4.9354E-05	1.078	0.00065413	0.99666	0.00060478	606.8060653099152	61.555	1.1826	62.109	61.723	62.906	0.55386	0.0051434	-0.00048171	NaN	28.081	44	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	238370	+		55263	23789	36870	36885							-0.0004774820531565638
SPRQDTSTT	9	Unmodified	_SPRQDTSTT_					0	0	0			REV__ENST00000485692.1_1_9:135906443-135919474:+|nuORF	REV__ENST00000485692.1_1_9:135906443-135919474:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.73724365234375	2	496.735803	991.457052	-0.073905	-3.6711E-05	4.0075	0.0019907	3.9336	0.001954	496.7375659828047	59.559	0.70983	59.546	59.225	59.935	-0.013733					35	18	3	0	0	0	0.58668	1	5500	5500		47.657	5.2612	1	333290	+		55264	27528	36871	36886	62560	62560					-0.039017892181959724
SPRRVGPT	8	Unmodified	_SPRRVGPT_					0	0	0			REV__ENST00000314117.8_1_4:37650968-37687967:-|nuORF	REV__ENST00000314117.8_1_4:37650968-37687967:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2515869140625	2	435.251226	868.487899	1.0668	0.00046434	-0.89122	-0.0003879	0.17561	7.6435E-05	435.250771366413	92.701	1.0063	93.148	92.733	93.739	0.44661					47	23	3	0	0	0	0.87259	1	11025	11025		58.782	9.3404	1	284480	+		55265	24932	36872	36887	62561	62561					0.04839453677391248
SPRRVPAS	8	Unmodified	_SPRRVPAS_					0	0	0			REV__ENST00000377100.7_1_10:21823171-21823273:+|nuORF	REV__ENST00000377100.7_1_10:21823171-21823273:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2530822753906	2	435.251226	868.487899	1.6601	0.00072257	-1.6819	-0.00073205	-0.021767	-9.474E-06	435.25040422889157	93.013	2.1505	92.951	91.863	94.014	-0.06144					107	50	3	0	0	0	0.86677	1	9818	9818		27.882	4.8398	1	812220	+		55266	25854	36873	36888	62562	62562					0.04839453677379879
SPRRVPAS	8	Unmodified	_SPRRVPAS_					0	0	0			REV__ENST00000377100.7_1_10:21823171-21823273:+|nuORF	REV__ENST00000377100.7_1_10:21823171-21823273:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2519836425781	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.88601	1	7810	7810		34.173	5.023	1	3322700	+		55267	25854	36873	36888	62563	62563					0.04839453677379879
SPRRVPAS	8	Unmodified	_SPRRVPAS_					0	0	0			REV__ENST00000377100.7_1_10:21823171-21823273:+|nuORF	REV__ENST00000377100.7_1_10:21823171-21823273:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2518310546875	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.82658	1	7879	7879		21.96	0	1	2743300	+		55268	25854	36873	36888	62564	62564					0.04839453677379879
SPRTPRQP	8	Unmodified	_SPRTPRQP_					0	0	0			REV__nc|ENSG00000185168|Q8N8I6|LINC00482	REV__nc|ENSG00000185168|Q8N8I6|LINC00482	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.7605895996094	2	469.761958	937.509363	0.13992	6.5729E-05	-1.2577	-0.0005908	-1.1177	-0.00052507	469.7613068625106	35.735	1.6772	35.674	35.283	36.96	-0.060337					67	47	2	0	0	0	0.86288	1	1998	1998		26.796	0	1	144740	+		55269	30098	36874	36889	62565	62565					0.03810838706078812
SPRVPRGG	8	Unmodified	_SPRVPRGG_					0	0	0		nc|ENSG00000174938|Q6UXD5-2|SEZ6L2;nc|ENSG00000174938|Q6UXD5-3|SEZ6L2;nc|ENSG00000174938|Q6UXD5-5|SEZ6L2;nc|ENSG00000174938|Q6UXD5|SEZ6L2;ENSG00000174938|ENST00000617533|SEZ6L2;nc|ENSG00000174938|Q6UXD5-4|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2373046875	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.84341	1	7294	7294		24.203	0	1	2127000			55270	6973	36875	36890	62566	62566					0.04243184505912723
SPRVPRGG	8	Unmodified	_SPRVPRGG_					0	0	0		nc|ENSG00000174938|Q6UXD5-2|SEZ6L2;nc|ENSG00000174938|Q6UXD5-3|SEZ6L2;nc|ENSG00000174938|Q6UXD5-5|SEZ6L2;nc|ENSG00000174938|Q6UXD5|SEZ6L2;ENSG00000174938|ENST00000617533|SEZ6L2;nc|ENSG00000174938|Q6UXD5-4|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2381286621094	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.85277	1	7133	7133		25.45	0	1	1692300			55271	6973	36875	36890	62567	62567					0.04243184505912723
SPRVPRGG	8	Unmodified	_SPRVPRGG_					0	0	0		nc|ENSG00000174938|Q6UXD5-2|SEZ6L2;nc|ENSG00000174938|Q6UXD5-3|SEZ6L2;nc|ENSG00000174938|Q6UXD5-5|SEZ6L2;nc|ENSG00000174938|Q6UXD5|SEZ6L2;ENSG00000174938|ENST00000617533|SEZ6L2;nc|ENSG00000174938|Q6UXD5-4|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	nc|ENSG00000174938|Q6UXD5-2|SEZ6L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2380065917969	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.85277	4	7109	7062;7072;7109;7328		37.159	3.7075	1	1341700			55272	6973	36875	36890	62568;62569;62570;62571	62570					0.04243184505912723
SPSGMLRGAPG	11	Unmodified	_SPSGMLRGAPG_					0	0	0		nc|ENSG00000231721|A0A455ZAR2|LINC-PINT;ENST00000451786.5_1_7:130792823-130793084:-|nuORF	nc|ENSG00000231721|A0A455ZAR2|LINC-PINT	nc|ENSG00000231721|A0A455ZAR2|LINC-PINT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.256591796875	2	515.260933	1028.50731	0.032083	1.6531E-05	-3.0562	-0.0015747	-3.0241	-0.0015582	515.2593049894326	30.893	0.80307	30.846	30.538	31.341	-0.047062					29	20	2	0	0	0	0.45992	1	1709	1709		54.722	18.276	1	31227			55273	11905	36876	36891	62572	62572					-0.005799580940220039
SPSGMLRGAPG	11	Unmodified	_SPSGMLRGAPG_					0	0	0		nc|ENSG00000231721|A0A455ZAR2|LINC-PINT;ENST00000451786.5_1_7:130792823-130793084:-|nuORF	nc|ENSG00000231721|A0A455ZAR2|LINC-PINT	nc|ENSG00000231721|A0A455ZAR2|LINC-PINT	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	515.260933	1028.50731	0.26458	0.00013633	-2.9387	-0.0015142	-2.6741	-0.0013779	515.2591396509968	30.829	0.60144	30.847	30.641	31.242	0.018362	0.018742	0.00013554	NaN	54.722	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35485			55274	11905	36876	36891							-0.005799580940220039
SPSLLSEH	8	Unmodified	_SPSLLSEH_					0	0	0			REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000197283|Q96PV0-3|SYNGAP1;REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2231140136719	2	435.2218	868.429047	0.32239	0.00014031	3.6661	0.0015956	3.9885	0.0017359	435.223399209331	94.324	0.97275	94.759	94.514	95.487	0.43539					50	24	3	0	0	0	0.9159	1	11326	11326		44.531	0	1	1317400	+		55275	19340;23216;27400	36877	36892	62573	62573					-0.010430674076133073
SPSLPPMWTA	10	Unmodified	_SPSLPPMWTA_					0	0	0			REV__nc|ENSG00000148840|Q5VV67-2|PPRC1	REV__nc|ENSG00000148840|Q5VV67-2|PPRC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.7060546875	2	543.76806	1085.52157	0.5473	0.0002976	1.4184	0.00077128	1.9657	0.0010689	543.7690588449835	31.84	0.54048	31.789	31.567	32.108	-0.051031					17	11	2	0	0	0	0.37624	1	1811	1811		34.173	14.813	1	33200	+		55276	29926	36878	36893	62574	62574					-0.01777305665723361
SPSPCPAR	8	Unmodified	_SPSPCPAR_					0	0	0			REV__ENST00000329146.8_1_14:105946005-105946200:+|nuORF	REV__ENST00000329146.8_1_14:105946005-105946200:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.7847595214844	2	407.697438	813.380322	-1.9686	-0.00080261	1.8479	0.00075338	-0.12073	-4.9223E-05	407.6963267720037	34.065	0.15706	34.065	33.981	34.138	0					5	4	2	0	0	0	0.4196	1	1794	1794		6.3127	0	1	18222	+		55277	25102	36879	36894	62575	62575					-0.03383259248369086
SPSPKKRN	8	Unmodified	_SPSPKKRN_					0	0	0		ENST00000488830.6_1_2:175495242-175495311:-|nuORF	ENST00000488830.6_1_2:175495242-175495311:-|nuORF	ENST00000488830.6_1_2:175495242-175495311:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2637634277344	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.89962	1	7927	7927		38.806	3.1879	1	2957200			55278	12638	36880	36895	62576	62576					0.05435722848858404
SPSPKKRN	8	Unmodified	_SPSPKKRN_					0	0	0		ENST00000488830.6_1_2:175495242-175495311:-|nuORF	ENST00000488830.6_1_2:175495242-175495311:-|nuORF	ENST00000488830.6_1_2:175495242-175495311:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2633056640625	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.87064	1	7762	7762		29.15	3.6994	1	4597500			55279	12638	36880	36895	62577	62577					0.05435722848858404
SPSPKKRN	8	Unmodified	_SPSPKKRN_					0	0	0		ENST00000488830.6_1_2:175495242-175495311:-|nuORF	ENST00000488830.6_1_2:175495242-175495311:-|nuORF	ENST00000488830.6_1_2:175495242-175495311:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2635803222656	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.87064	1	7733	7733		29.15	0	1	4061400			55280	12638	36880	36895	62578	62578					0.05435722848858404
SPSPLRDL	8	Unmodified	_SPSPLRDL_					0	0	0		ENSG00000115274|ENST00000233331|INO80B	ENSG00000115274|ENST00000233331|INO80B	ENSG00000115274|ENST00000233331|INO80B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.7449035644531	2	442.745442	883.476331	0.64135	0.00028395	-1.9375	-0.00085781	-1.2961	-0.00057386	442.74444898749334	89.382	0.64714	89.533	89.182	89.829	0.1519					34	14	3	0	0	0	0.87064	1	8938	8938		29.15	3.6994	1	939150			55281	2829	36881	36896	62579	62579					0.029932118633610116
SPSRLRPWLP	10	Unmodified	_SPSRLRPWLP_					0	0	0			REV__chr5:69844913-70420249|13|11.62|0.38|4.93|+|0|TE_info:LTR12E,LTR12E_dup46,ERV1,LTR,donor,+,69844126,69844913|None,GTF2H2B|1	REV__chr5:69844913-70420249|13|11.62|0.38|4.93|+|0|TE_info:LTR12E,LTR12E_dup46,ERV1,LTR,donor,+,69844126,69844913|None,GTF2H2B|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.8468017578125	2	604.848564	1207.68258	-0.48054	-0.00029066	-3.4461	-0.0020844	-3.9266	-0.002375	604.8463930179684	96.382	3.2088	96.445	95.465	98.674	0.06337					204	74	4	0	0	0	0.86763	1	10201	10201		26.693	4.1133	1	566220	+		55282	15863	36882	36897	62580	62580					0.08704204762511836
SPSVPLSIALL	11	Unmodified	_SPSVPLSIALL_					0	0	0			REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3742065429688	2	548.834257	1095.65396	-0.36734	-0.00020161	-2.7559	-0.0015125	-3.1232	-0.0017141	548.832807544665	37.456	0.40215	37.432	37.26	37.662	-0.023975					15	8	2	0	0	0	0.17529	1	2465	2465		42.396	5.9494	1	55524	+		55283	28798	36883	36898	62581	62581					0.10996042342731016
SPSVSLGLAI	10	Unmodified	_SPSVSLGLAI_					0	0	0			REV__ENST00000262803.9_1_19:18978594-18978843:+|nuORF	REV__ENST00000262803.9_1_19:18978594-18978843:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2760925292969	2	472.276575	942.538597	0.52277	0.00024689	-0.32885	-0.00015531	0.19392	9.1582E-05	472.2762486632179	37.09	1.1608	37.403	37.002	38.163	0.31312					63	28	4	0	0	0	0.3985	1	2972	2972		64.207	7.4862	1	1415200	+		55284	24431	36884	36899	62582	62582					0.06502938211713172
SPSWKAAPVTR	11	Unmodified	_SPSWKAAPVTR_					0	0	0		ENST00000394321.9_1_19:7591427-7598678:+|nuORF	ENST00000394321.9_1_19:7591427-7598678:+|nuORF	ENST00000394321.9_1_19:7591427-7598678:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5585632324219	3	400.555895	1198.64586	2.9038	0.0011631	3.558	0.0014252	6.4618	0.0025883	400.55722775640623	19.611	0.7765	19.541	19.308	20.084	-0.070013					69	31	4	0	0	0	0.59831	1	447	447		44.639	0.98865	1	403570			55285	11065	36885	36900	62583	62583					0.054479081459248846
SPTASCRS	8	Unmodified	_SPTASCRS_					0	0	0			REV__ENSG00000184863|ENST00000401878|RBM33	REV__ENSG00000184863|ENST00000401878|RBM33	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.17034912109375	2	404.684527	807.354502	1.2489	0.0005054	2.589	0.0010477	3.8378	0.0015531	404.6865075377484	77.878	0.2421	78.284	78.142	78.384	0.40531					7	5	2	0	0	0	0.4196	1	8864	8864		35.618	6.4687	1	68273	+		55286	22706	36886	36901	62584	62584					-0.056881534906324305
SPTEENGFS	9	Unmodified	_SPTEENGFS_					0	0	0			REV__ENSG00000110237|ENST00000263674|ARHGEF17	REV__ENSG00000110237|ENST00000263674|ARHGEF17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2391662597656	2	484.203804	966.393055	-0.53982	-0.00026138	0.29687	0.00014375	-0.24295	-0.00011764	484.20290110998917	84.849	0.47583	85.296	85.033	85.509	0.44736					18	11	2	0	0	0	0.20789	1	9883	9883		53.351	16.323	1	94091	+		55287	17803	36887	36902	62585	62585					-0.09148569375122406
SPTEERQL	8	Unmodified	_SPTEERQL_					0	0	0			REV__nc|ENSG00000107862|Q92538-3|GBF1	REV__nc|ENSG00000107862|Q92538-3|GBF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.2435302734375	2	480.243264	958.471974	-1.848	-0.00088747	2.0889	0.0010032	0.24097	0.00011572	480.24400212311673	32.713	0.57332	32.713	32.476	33.049	0					49	27	3	0	0	0	0.9283	1	1654	1654		49.442	3.4896	1	131570	+		55288	17679	36888	36903	62586	62586					-0.008922973501853448
SPTFLTKLL	9	Unmodified	_SPTFLTKLL_					0	0	0		ENST00000422374.1_1_1:56046773-56080673:+|nuORF	ENST00000422374.1_1_1:56046773-56080673:+|nuORF	ENST00000422374.1_1_1:56046773-56080673:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.3109436035156	2	510.310418	1018.60628	-0.38342	-0.00019566	0.58095	0.00029646	0.19753	0.0001008	510.3105307146198	79.291	0.70142	79.422	79.091	79.792	0.13086					56	21	3	0	0	0	0.44421	2	7509	7490;7509		54.776	10.354	1	423200			55289	11480	36889	36904	62587;62588	62588					0.09772388142516775
SPTFLTKLL	9	Unmodified	_SPTFLTKLL_					0	0	0		ENST00000422374.1_1_1:56046773-56080673:+|nuORF	ENST00000422374.1_1_1:56046773-56080673:+|nuORF	ENST00000422374.1_1_1:56046773-56080673:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.3108215332031	2	510.310418	1018.60628	0.61904	0.0003159	-0.34976	-0.00017848	0.26928	0.00013742	510.3100260358087	79.225	0.7446	79.363	79.045	79.789	0.13883					63	24	4	0	0	0	0.30689	2	7523	7523;7531		64.207	11.271	1	424560			55290	11480	36889	36904	62589;62590	62589					0.09772388142516775
SPTFLTKLL	9	Unmodified	_SPTFLTKLL_					0	0	0		ENST00000422374.1_1_1:56046773-56080673:+|nuORF	ENST00000422374.1_1_1:56046773-56080673:+|nuORF	ENST00000422374.1_1_1:56046773-56080673:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.31072998046875	2	510.310418	1018.60628	-1.2754	-0.00065085	1.5317	0.00078164	0.25629	0.00013079	510.3110295003225	79.313	0.80144	79.412	79.114	79.915	0.098694					56	25	3	0	0	0	0.15959	1	7477	7477		82.241	18.033	1	419210			55291	11480	36889	36904	62591	62591					0.09772388142516775
SPTLLPAGG	9	Unmodified	_SPTLLPAGG_					0	0	0		ENST00000431239.5_1_1:146714466-146724362:+|nuORF	ENST00000431239.5_1_1:146714466-146724362:+|nuORF	ENST00000431239.5_1_1:146714466-146724362:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7286376953125	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.7932	1	7533	7533		19.36	0	1	159770			55292	11644	36890	36905	62592	62592					0.030704244603725783
SPTLSPIR	8	Unmodified	_SPTLSPIR_					0	0	0			REV__ENST00000223357.7_1_7:44144048-44144219:+|nuORF	REV__ENST00000223357.7_1_7:44144048-44144219:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7547912597656	2	435.75581	869.497067	-0.098992	-4.3136E-05	-2.3128	-0.0010078	-2.4118	-0.0010509	435.75462599362015	78.181	0.86222	78.586	77.977	78.839	0.40531					45	20	3	0	0	0	0.86677	1	8915	8915		27.882	2.4321	1	792420	+		55293	24172	36891	36906	62593	62593					0.0570980224304094
SPTSGKKKRR	10	Unmodified	_SPTSGKKKRR_					0	0	0			REV__ENST00000491775.5_1_13:111806042-111806288:+|nuORF	REV__ENST00000491775.5_1_13:111806042-111806288:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	572.8511962890625	2	572.849096	1143.68364	-0.17047	-9.7652E-05	0.60384	0.00034591	0.43337	0.00024826	572.8493038317292	17.117	0.32895	17.038	16.892	17.221	-0.079056					26	12	3	0	0	0	0.86587	1	182	182		29.17	1.2878	1	167180	+		55294	27662	36892	36907	62594	62594					0.11754419131420946
SPTSSEAE	8	Unmodified	_SPTSSEAE_					0	0	0		nc|ENSG00000164830|Q8N573-3|OXR1;nc|ENSG00000164830|Q8N573-2|OXR1;nc|ENSG00000164830|Q8N573-5|OXR1;ENSG00000164830|ENST00000517566|OXR1;nc|ENSG00000164830|Q8N573|OXR1	nc|ENSG00000164830|Q8N573-3|OXR1	nc|ENSG00000164830|Q8N573-3|OXR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.1705322265625	2	404.171973	806.329392	-1.5918	-0.00064335	-3.287	-0.0013285	-4.8787	-0.0019719	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.84341	1	7438	7438		24.203	0	1	6183600			55295	6009	36893	36908	62595	62595					-0.08151929812231629
SPTVIIILG	9	Unmodified	_SPTVIIILG_					0	0	0		ENSG00000146233|ENST00000275016|CYP39A1	ENSG00000146233|ENST00000275016|CYP39A1	ENSG00000146233|ENST00000275016|CYP39A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7932434082031	2	456.791861	911.569169	1.3225	0.00060413	1.789	0.00081719	3.1115	0.0014213	456.79255750887523	35.219	1.7546	35.6	35.098	36.853	0.3812					157	44	4	0	0	0	0.72402	1	2738	2738		38.806	0	1	7423700			55296	4828	36894	36909	62596	62596					0.1098471659677216
SPTVTAKLRPK	11	Unmodified	_SPTVTAKLRPK_					0	0	0			REV__nc|ENSG00000069275|Q9H1E3-2|NUCKS1	REV__nc|ENSG00000069275|Q9H1E3-2|NUCKS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3783569335938	2	599.36933	1196.72411	-1.5476	-0.00092757	-0.24962	-0.00014961	-1.7972	-0.0010772	599.3691369416035	40.071	0.40335	40.66	40.431	40.835	0.58915					18	9	3	0	0	0	0.17527	1	3415	3415		20.03	0	1	468510	+		55297	16579	36895	36910	62597	62597					0.1336134073114863
SPTYHIEL	8	Unmodified	_SPTYHIEL_					0	0	0			REV__nc|ENSG00000175161|Q8N3J6-4|CADM2	REV__nc|ENSG00000175161|Q8N3J6-4|CADM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.242919921875	2	480.245275	958.475997	-0.26606	-0.00012778	-4.4281	-0.0021266	-4.6942	-0.0022544	480.24316227273624	32.835	0.74734	32.78	32.401	33.148	-0.05434					33	17	3	0	0	0	0.92973	1	1959	1959		50.025	0.58299	1	181300	+		55298	22042	36896	36911	62598	62598					-0.004902078564896328
SPVALVPE	8	Unmodified	_SPVALVPE_					0	0	0		ENST00000416600.6_1_20:3846990-3847266:+|nuORF	ENST00000416600.6_1_20:3846990-3847266:+|nuORF	ENST00000416600.6_1_20:3846990-3847266:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7852478027344	2	406.231636	810.448719	-0.34005	-0.00013814	3.7841	0.0015372	3.444	0.0013991	406.2329480923756	30.082	0.90731	30.039	29.634	30.542	-0.043095					23	20	2	0	0	0	0.4196	1	1605	1605		20.947	9.4359	1	21752			55299	11396	36897	36912	62599	62599					0.03591308603131438
SPVDLKIP	8	Unmodified	_SPVDLKIP_					0	0	0		nc|ENSG00000196233|Q96JN0-2|LCOR;nc|ENSG00000196233|Q96JN0|LCOR	nc|ENSG00000196233|Q96JN0-2|LCOR	nc|ENSG00000196233|Q96JN0-2|LCOR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25201416015625	2	434.760561	867.506569	-0.16683	-7.2532E-05	-3.2904	-0.0014305	-3.4572	-0.0015031	434.7589039533436	82.112	0.30836	82.178	81.999	82.308	0.06591					8	6	2	0	0	0	0.4196	1	8113	8113		24.203	0	1	15080			55300	15178	36898	36913	62600	62600					0.06751570528570028
SPVDSVLFY	9	Unmodified	_SPVDSVLFY_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.7638549804688	2	513.760758	1025.50696	-0.043813	-2.251E-05	0.46678	0.00023981	0.42297	0.0002173	513.760887161789	84.602	1.5157	85.041	84.386	85.902	0.43924					93	37	5	0	0	0	0.09311	4	9853	9831;9841;9853;9865		94.006	27.548	1	5808400			55301	6360	36899	36914	62601;62602;62603;62604	62603					-0.00477054542238875
SPVDSVLFY	9	Unmodified	_SPVDSVLFY_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.7611083984375	2	513.760758	1025.50696	0.11106	5.7058E-05	0.039034	2.0054E-05	0.15009	7.7112E-05	513.7606642855523	84.668	1.4364	85.116	84.674	86.111	0.44736					97	35	5	0	0	0	0.036317	5	9886	9865;9875;9886;9898;9910		114.59	51.607	1	5600500			55302	6360	36899	36914	62605;62606;62607;62608;62609	62607					-0.00477054542238875
SPVDSVLFY	9	Unmodified	_SPVDSVLFY_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	513.760758	1025.50696	-0.90899	-0.00046701	0.14986	7.6994E-05	-0.75913	-0.00039001	513.7613497963076	85.037	0.17667	85.037	84.92	85.096	0	-0.027912	-4.8577E-05	NaN	114.59	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20013			55303	6360	36899	36914							-0.00477054542238875
SPVESVLFY	9	Unmodified	_SPVESVLFY_					0	0	0		ENSG00000173801|ENST00000393931|JUP	ENSG00000173801|ENST00000393931|JUP	ENSG00000173801|ENST00000393931|JUP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.7679443359375	2	520.768583	1039.52261	0.081424	4.2403E-05	-0.44398	-0.00023121	-0.36256	-0.00018881	520.7681061740968	83.04	1.3308	83.471	82.795	84.126	0.43108					78	31	4	0	0	0	0.25826	1	9605	9605		68.485	10.673	1	1676400			55304	6886	36900	36915	62610	62610					0.004432319748275404
SPVESVLFY	9	Unmodified	_SPVESVLFY_					0	0	0		ENSG00000173801|ENST00000393931|JUP	ENSG00000173801|ENST00000393931|JUP	ENSG00000173801|ENST00000393931|JUP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.7678833007812	2	520.768583	1039.52261	0.14658	7.6336E-05	-0.53726	-0.00027979	-0.39068	-0.00020345	520.7680763861565	83.008	1.2473	83.482	82.919	84.166	0.47383					80	29	4	0	0	0	0.28875	1	9648	9648		65.803	2.4969	1	1692100			55305	6886	36900	36915	62611	62611					0.004432319748275404
SPVFPVVVPPR	11	Unmodified	_SPVFPVVVPPR_					0	0	0		ENST00000274811.8_1_5:175955262-175955373:-|nuORF	ENST00000274811.8_1_5:175955262-175955373:-|nuORF	ENST00000274811.8_1_5:175955262-175955373:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.856201171875	2	597.355691	1192.69683	2.4166	0.0014436	-2.8752	-0.0017175	-0.45857	-0.00027393	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.65746	1	9926	9926		37.812	3.639	1	8047600			55306	9591	36901	36916	62612	62612					0.10818857190793096
SPVFPVVVPPR	11	Unmodified	_SPVFPVVVPPR_					0	0	0		ENST00000274811.8_1_5:175955262-175955373:-|nuORF	ENST00000274811.8_1_5:175955262-175955373:-|nuORF	ENST00000274811.8_1_5:175955262-175955373:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.85595703125	2	597.355691	1192.69683	0.9357	0.00055895	-0.77395	-0.00046233	0.16175	9.662E-05	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.61369	3	9580	9580;9684;9818		42.864	7.7122	1	19058000			55307	9591	36901	36916	62613;62614;62615	62613					0.10818857190793096
SPVGELIIVV	10	Unmodified	_SPVGELIIVV_					0	0	0			REV__ENSG00000104154|ENST00000261867|SLC30A4	REV__ENSG00000104154|ENST00000261867|SLC30A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3180541992188	2	513.3157	1024.61685	-0.40505	-0.00020792	2.0459	0.0010502	1.6408	0.00084226	513.3166290585863	43.201	1.1169	43.206	42.933	44.05	0.0057487					65	27	3	0	0	0	0.85251	1	2946	2946		19.997	0.6368	1	350060	+		55308	17441	36902	36917	62616	62616					0.10552370796949617
SPVGSESY	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SPVGSESY_					1	0	0			REV__ENSG00000124215|ENST00000348616|CDH26	REV__ENSG00000124215|ENST00000348616|CDH26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.18914794921875	2	434.190165	866.365778	1.1034	0.00047907	-1.2675	-0.00055032	-0.16411	-7.1255E-05	434.1882877075577	96.462	1.4427	96.866	96.416	97.859	0.40452					72	34	4	0	0	0	0.93529	1	11602	11602		52.299	18.784	1	491260	+		55309	18572	36903	36918	62617	62617					-0.07275052915520064
SPVKAVRD	8	Unmodified	_SPVKAVRD_					0	0	0		ENSG00000176986|ENST00000345254|SEC24C;nc|ENSG00000176986|P53992-2|SEC24C	ENSG00000176986|ENST00000345254|SEC24C	ENSG00000176986|ENST00000345254|SEC24C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.2513427734375	2	436.253434	870.492316	1.8861	0.00082282	1.8789	0.00081969	3.7651	0.0016425	436.2540023475616	112.21	0.53641	112.24	112.11	112.65	0.030602					22	19	2	0	0	0	0.87064	1	13600	13600		29.15	0	1	431720			55310	7112	36904	36919	62618	62618					0.051889181002820806
SPVKKQRPLL	10	Unmodified	_SPVKKQRPLL_					0	0	0		nc|ENSG00000101040|Q9ULU4-2|ZMYND8;nc|ENSG00000101040|Q9ULU4-16|ZMYND8;nc|ENSG00000101040|Q9ULU4-19|ZMYND8;ENSG00000101040|ENST00000471951|ZMYND8;nc|ENSG00000101040|Q9ULU4-11|ZMYND8;nc|ENSG00000101040|Q9ULU4-10|ZMYND8;nc|ENSG00000101040|Q9ULU4-13|ZMYND8;nc|ENSG00000101040|Q9ULU4|ZMYND8;nc|ENSG00000101040|Q9ULU4-20|ZMYND8;nc|ENSG00000101040|Q9ULU4-5|ZMYND8;nc|ENSG00000101040|Q9ULU4-9|ZMYND8;nc|ENSG00000101040|Q9ULU4-22|ZMYND8;nc|ENSG00000101040|Q9ULU4-4|ZMYND8;nc|ENSG00000101040|Q9ULU4-12|ZMYND8;nc|ENSG00000101040|Q9ULU4-14|ZMYND8;nc|ENSG00000101040|Q9ULU4-18|ZMYND8;nc|ENSG00000101040|Q9ULU4-21|ZMYND8;nc|ENSG00000101040|Q9ULU4-23|ZMYND8;nc|ENSG00000101040|Q9ULU4-15|ZMYND8;nc|ENSG00000101040|Q9ULU4-6|ZMYND8;nc|ENSG00000101040|Q9ULU4-3|ZMYND8;ENST00000468376.2_1_20:45867286-45947776:-|nuORF;chr20:47347926-47356380|58|12.05|0.44|4.76|-|ENST00000536340|ZMYND8,ZMYND8	nc|ENSG00000101040|Q9ULU4-2|ZMYND8	nc|ENSG00000101040|Q9ULU4-2|ZMYND8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.3753662109375	2	583.374415	1164.73428	-1.7422	-0.0010164	4.0544	0.0023653	2.3122	0.0013489	583.3766458505703	43.605	2.2277	44.055	43.187	45.415	0.45024					135	54	4	0	0	0	0.86802	1	3895	3895		27.047	0.3544	1	6139000			55311	362	36905	36920	62619	62619					0.15849948456411767
SPVKRPRKEP	10	Unmodified	_SPVKRPRKEP_					0	0	0		ENST00000586588.5_1_19:10244345-10254710:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1	ENST00000586588.5_1_19:10244345-10254710:-|nuORF	ENST00000586588.5_1_19:10244345-10254710:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.3584594726562	2	597.359296	1192.70404	-0.45682	-0.00027289	-1.281	-0.00076525	-1.7379	-0.0010381	597.3582006630761	100.19	3.2446	100.23	98.977	102.22	0.046349					174	76	4	0	0	0	0.86047	1	10733	10733		23.523	0.94304	1	4145900			55312	3689	36906	36921	62620	62620					0.11539589791232174
SPVLIAAVI	9	Unmodified	_SPVLIAAVI_					0	0	0		ENST00000522335.5_1_8:144462155-144464818:+|nuORF;ENSG00000158106|ENST00000289013|RHPN1	ENST00000522335.5_1_8:144462155-144464818:+|nuORF	ENST00000522335.5_1_8:144462155-144464818:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7877197265625	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.69914	1	3121	3121		40.573	5.3719	1	12471000			55313	5461	36907	36922	62621	62621					0.11308733942325944
SPVLIAAVI	9	Unmodified	_SPVLIAAVI_					0	0	0		ENST00000522335.5_1_8:144462155-144464818:+|nuORF;ENSG00000158106|ENST00000289013|RHPN1	ENST00000522335.5_1_8:144462155-144464818:+|nuORF	ENST00000522335.5_1_8:144462155-144464818:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7875061035156	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.69914	1	3162	3162		40.573	5.3719	1	12523000			55314	5461	36907	36922	62622	62622					0.11308733942325944
SPVLIAAVI	9	Unmodified	_SPVLIAAVI_					0	0	0		ENST00000522335.5_1_8:144462155-144464818:+|nuORF;ENSG00000158106|ENST00000289013|RHPN1	ENST00000522335.5_1_8:144462155-144464818:+|nuORF	ENST00000522335.5_1_8:144462155-144464818:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7876281738281	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.7932	1	2857	2857		25.45	0	1	9571700			55315	5461	36907	36922	62623	62623					0.11308733942325944
SPVLIKKFSD	10	Unmodified	_SPVLIKKFSD_					0	0	0		ENSG00000052749|ENST00000370992|RRP12	ENSG00000052749|ENST00000370992|RRP12	ENSG00000052749|ENST00000370992|RRP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.329833984375	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.85834	1	9708	9708		22.58	0	1	17338000			55316	1004	36908	36923	62624	62624					0.0881915819995811
SPVLIKKFSD	10	Unmodified	_SPVLIKKFSD_					0	0	0		ENSG00000052749|ENST00000370992|RRP12	ENSG00000052749|ENST00000370992|RRP12	ENSG00000052749|ENST00000370992|RRP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.330322265625	2	567.331882	1132.64921	-0.50942	-0.00028901	-1.8517	-0.0010506	-2.3612	-0.0013396	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.86587	1	10787	10787		29.17	10.067	1	5685000			55317	1004	36908	36923	62625	62625					0.0881915819995811
SPVLILGGI	9	Unmodified	_SPVLILGGI_					0	0	0		ENSG00000099338|ENST00000409235|CATSPERG;ENST00000467739.1_1_19:38837137-38839675:+|nuORF	ENSG00000099338|ENST00000409235|CATSPERG	ENSG00000099338|ENST00000409235|CATSPERG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7803039550781	2	434.778754	867.542954	-0.30995	-0.00013476	4.1464	0.0018027	3.8364	0.001668	434.78044491218617	37.836	1.2567	38.149	37.864	39.121	0.31312					114	31	4	0	0	0	0.76996	1	3145	3145		33.516	1.5607	1	8178800			55318	1759	36909	36924	62626	62626					0.10388447425293634
SPVLPSIPE	9	Unmodified	_SPVLPSIPE_					0	0	0		ENST00000376560.7_2_6:30530414-30530753:+|nuORF	ENST00000376560.7_2_6:30530414-30530753:+|nuORF	ENST00000376560.7_2_6:30530414-30530753:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7608337402344	2	469.7633	937.512048	-1.0651	-0.00050035	-2.9191	-0.0013713	-3.9842	-0.0018716	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.67345	1	1852	1852		42.396	0	1	219920			55319	10820	36910	36925	62627	62627					0.04079249320375311
SPVLPSIPE	9	Unmodified	_SPVLPSIPE_					0	0	0		ENST00000376560.7_2_6:30530414-30530753:+|nuORF	ENST00000376560.7_2_6:30530414-30530753:+|nuORF	ENST00000376560.7_2_6:30530414-30530753:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	469.7633	937.512048	0.41158	0.00019334	-4.1644	-0.0019563	-3.7528	-0.0017629	469.7612373609716	35.178	1.5442	35.426	34.892	36.436	0.24769	-0.09111	-0.00020834	NaN	42.396	83	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	436170			55320	10820	36910	36925							0.04079249320375311
SPVLPSIPE	9	Unmodified	_SPVLPSIPE_					0	0	0		ENST00000376560.7_2_6:30530414-30530753:+|nuORF	ENST00000376560.7_2_6:30530414-30530753:+|nuORF	ENST00000376560.7_2_6:30530414-30530753:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	469.7633	937.512048	0.78386	0.00036823	-4.4201	-0.0020764	-3.6362	-0.0017082	469.7610993493348	35.001	1.4154	35.382	34.977	36.392	0.3812	-0.13529	-0.00044855	NaN	42.396	83	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	539720			55321	10820	36910	36925							0.04079249320375311
SPVMKPKN	8	Unmodified	_SPVMKPKN_					0	0	0			REV__nc|ENSG00000144331|Q569K4-2|ZNF385B	REV__nc|ENSG00000144331|Q569K4-2|ZNF385B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7541809082031	2	450.752213	899.489873	-0.14159	-6.3823E-05	4.4024	0.0019844	4.2608	0.0019205	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.89494	1	7714	7714		37.159	1.9584	1	109620	+		55322	19881	36911	36926	62628	62628					0.036107463709754484
SPVMKPKN	8	Unmodified	_SPVMKPKN_					0	0	0			REV__nc|ENSG00000144331|Q569K4-2|ZNF385B	REV__nc|ENSG00000144331|Q569K4-2|ZNF385B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7547302246094	2	450.752213	899.489873	0.5597	0.00025229	3.7702	0.0016994	4.3299	0.0019517	450.7538239580323	79.562	2.1146	79.701	78.151	80.265	0.13883					102	73	2	0	0	0	0.89494	1	7423	7423		37.159	0	1	128600	+		55323	19881	36911	36926	62629	62629					0.036107463709754484
SPVNRGRLA	9	Unmodified	_SPVNRGRLA_					0	0	0		nc|ENSG00000187634|Q96NU1-6|SAMD11;nc|ENSG00000187634|Q96NU1-4|SAMD11;nc|ENSG00000187634|Q96NU1|SAMD11;nc|ENSG00000187634|Q96NU1-5|SAMD11;ENSG00000187634|ENST00000616016|SAMD11	nc|ENSG00000187634|Q96NU1-6|SAMD11	nc|ENSG00000187634|Q96NU1-6|SAMD11	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2866516113281	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.247	1	76.381	75.881	76.881	0.13325								0	0	0	0.29103	1	7128	7128		40.573	3.4135	1				55324	7868	36912	36927	62630	62630					0.06602814114478406
SPVPSLLLA	9	Unmodified	_SPVPSLLLA_					0	0	0			REV__ENST00000598676.1_1_19:44118439-44118520:-|nuORF	REV__ENST00000598676.1_1_19:44118439-44118520:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.777099609375	2	448.776211	895.537869	0.22943	0.00010296	2.1224	0.00095248	2.3518	0.0010554	448.7769924771268	42.724	1.9014	42.789	42.073	43.975	0.065037					105	50	3	0	0	0	0.78058	1	2924	2924		30.504	1.3541	1	298770	+		55325	29287	36913	36928	62631	62631					0.08592143562680121
SPVPTILW	8	Unmodified	_SPVPTILW_					0	0	0		ENSG00000169855|ENST00000464233|ROBO1;nc|ENSG00000169855|Q9Y6N7-2|ROBO1;nc|ENSG00000169855|Q9Y6N7-6|ROBO1;nc|ENSG00000169855|Q9Y6N7-5|ROBO1;nc|ENSG00000169855|Q9Y6N7-4|ROBO1;nc|ENSG00000169855|Q9Y6N7-3|ROBO1;chr3:78668302-78668472|45|11.0|0.14|6.34|-|ENST00000495961|ROBO1,ROBO1;ENST00000484514.1_1_3:78710132-78763649:-|nuORF	ENSG00000169855|ENST00000464233|ROBO1	ENSG00000169855|ENST00000464233|ROBO1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3013610839844	2	456.763104	911.511654	-0.66392	-0.00030325	-3.9156	-0.0017885	-4.5795	-0.0020917	456.76120786053207	35.272	0.6706	35.216	34.889	35.559	-0.056385					24	15	2	0	0	0	0.4196	1	2238	2238		42.474	0	1	80956			55326	6529	36914	36929	62632	62632					0.052358743911895544
SPVRPEDLLVH	11	Unmodified	_SPVRPEDLLVH_					0	0	0		ENST00000307161.5_1_4:187455227-187455620:-|nuORF	ENST00000307161.5_1_4:187455227-187455620:-|nuORF	ENST00000307161.5_1_4:187455227-187455620:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.2345886230469	3	421.234822	1260.68264	-1.7566	-0.00073996	1.2671	0.00053375	-0.48953	-0.00020621	421.2352638615427	42.979	0.56604	43.676	43.381	43.947	0.69754					32	13	3	0	0	0	0.47591	1	3880	3880		53.597	14.883	1	1297300			55327	9869	36915	36930	62633	62633					0.06272159971854308
SPVSNLVP	8	Unmodified	_SPVSNLVP_					0	0	0		ENST00000491251.1_1_22:30418516-30421787:+|nuORF	ENST00000491251.1_1_22:30418516-30421787:+|nuORF	ENST00000491251.1_1_22:30418516-30421787:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7292175292969	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.8621	1	7596	7596		26.693	3.6504	1	159770			55328	12680	36916	36931	62634	62634					0.030704244603725783
SPVSRAPR	8	Unmodified	_SPVSRAPR_					0	0	0			REV__ENSG00000166025|ENST00000433060|AMOTL1	REV__ENSG00000166025|ENST00000433060|AMOTL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516784667969	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.88601	1	7663	7663		34.173	5.023	1	2823900	+		55329	21245	36917	36932	62635	62635					0.04839453677379879
SPVSRAPR	8	Unmodified	_SPVSRAPR_					0	0	0			REV__ENSG00000166025|ENST00000433060|AMOTL1	REV__ENSG00000166025|ENST00000433060|AMOTL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2518005371094	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.86677	1	8204	8204		27.882	2.4321	1	3370400	+		55330	21245	36917	36932	62636	62636					0.04839453677379879
SPVSRAPR	8	Unmodified	_SPVSRAPR_					0	0	0			REV__ENSG00000166025|ENST00000433060|AMOTL1	REV__ENSG00000166025|ENST00000433060|AMOTL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25189208984375	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.87064	1	7882	7882		29.15	0.89528	1	3322700	+		55331	21245	36917	36932	62637	62637					0.04839453677379879
SPVSRAPRL	9	Unmodified	_SPVSRAPRL_					0	0	0			REV__ENSG00000166025|ENST00000433060|AMOTL1	REV__ENSG00000166025|ENST00000433060|AMOTL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.3009338378906	2	491.793258	981.571963	0.13478	6.6286E-05	4.4765	0.0022015	4.6113	0.0022678	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.73802	1	5548	5548		37.812	5.8567	1	176030	+		55332	21245	36918	36933	62638	62638					0.08043984774269575
SPVSRAPRL	9	Unmodified	_SPVSRAPRL_					0	0	0			REV__ENSG00000166025|ENST00000433060|AMOTL1	REV__ENSG00000166025|ENST00000433060|AMOTL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.79327392578125	2	491.793258	981.571963	-1.178	-0.00057935	3.972	0.0019534	2.794	0.0013741	491.79505307157757	43.662	1.2118	44.112	43.311	44.523	0.45025					60	29	3	0	0	0	0.7932	1	3992	3992		25.574	0.12388	1	1655700	+		55333	21245	36918	36933	62639	62639					0.08043984774269575
SPVSSVSF	8	Unmodified	_SPVSSVSF_					0	0	0			REV__ENST00000439908.1_1_X:18884334-18884616:+|nuORF	REV__ENST00000439908.1_1_X:18884334-18884616:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.2035217285156	2	405.205618	808.396684	-0.18782	-7.6105E-05	-1.9721	-0.00079909	-2.1599	-0.0008752	405.20481127463523	77.736	2.7861	77.788	77.332	80.118	0.052696					165	97	3	0	0	0	0.85277	1	7525	7525		25.45	3.4903	1	140160	+		55334	26735	36919	36934	62640	62640					-0.015178548106064227
SPVSTLVC	8	Unmodified	_SPVSTLVC_					0	0	0		ENST00000527247.5_1_11:126099171-126110978:+|nuORF	ENST00000527247.5_1_11:126099171-126110978:+|nuORF	ENST00000527247.5_1_11:126099171-126110978:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2088928222656	2	403.209847	804.40514	-0.18721	-7.5483E-05	-1.9947	-0.00080429	-2.1819	-0.00087978	403.20895430476565	85.948	2.3712	86.015	85.029	87.4	0.067268					117	54	4	0	0	0	0.85277	1	8671	8671		25.45	0	1	1482400			55335	13278	36920	36935	62641	62641					-0.004886241656436141
SPVSTLVC	8	Unmodified	_SPVSTLVC_					0	0	0		ENST00000527247.5_1_11:126099171-126110978:+|nuORF	ENST00000527247.5_1_11:126099171-126110978:+|nuORF	ENST00000527247.5_1_11:126099171-126110978:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2092590332031	2	403.209847	804.40514	0.85516	0.00034481	-2.9281	-0.0011806	-2.0729	-0.00083583	403.2085877273137	85.891	2.1457	85.817	85.277	87.423	-0.073761					115	49	4	0	0	0	0.85277	1	8831	8831		25.45	0	1	1526100			55336	13278	36920	36935	62642	62642					-0.004886241656436141
SPVTITEP	8	Unmodified	_SPVTITEP_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.59375	2	422.226551	842.438549	-0.65453	-0.00027636	4.4055	0.0018601	3.7509	0.0015837	422.2282596145547	53.659	1.7604	53.597	52.817	54.577	-0.062065					76	48	2	0	0	0	0.4196	1	4334	4334		27.882	10.517	1	308680			55337	1487	36921	36936	62643	62643					0.011027008779024072
SPVTLLLLT	9	Unmodified	_SPVTLLLLT_					0	0	0			REV__nc|ENSG00000274576|P01814|IGHV2-70	REV__nc|ENSG00000274576|P01814|IGHV2-70	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8047180175781	2	478.804968	955.595384	-1.7281	-0.00082743	3.3413	0.0015998	1.6132	0.00077242	478.806439205216	41.295	1.2034	41.295	40.815	42.018	0					75	35	3	0	0	0	0.78983	1	2817	2817		27.882	2.4321	1	280900	+		55338	30198	36922	36937	62644	62644					0.11580985768239316
SPVTLRINN	9	Unmodified	_SPVTLRINN_					0	0	0			REV__nc|ENSG00000120616|Q9H2F5-3|EPC1	REV__nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8002624511719	2	507.290548	1012.56654	-0.55996	-0.00028406	-0.6124	-0.00031066	-1.1724	-0.00059473	507.2899733952273	48.929	0.57248	48.903	48.661	49.234	-0.025112					20	12	2	0	0	0	0.20789	1	4138	4138		27.047	2.8446	1	142200	+		55339	18418	36923	36938	62645	62645					0.060762611917994036
SPVTLRINN	9	Unmodified	_SPVTLRINN_					0	0	0			REV__nc|ENSG00000120616|Q9H2F5-3|EPC1	REV__nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	507.290548	1012.56654	-1.4689	-0.00074515	1.0264	0.00052067	-0.44252	-0.00022448	507.2909457453931	48.962	0.49479	48.962	48.693	49.188	0	-0.040953	0.0014429	NaN	27.047	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43872	+		55340	18418	36923	36938							0.060762611917994036
SPVTLRINN	9	Unmodified	_SPVTLRINN_					0	0	0			REV__nc|ENSG00000120616|Q9H2F5-3|EPC1	REV__nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	507.290548	1012.56654	-0.62289	-0.00031598	-0.41506	-0.00021055	-1.0379	-0.00052654	507.29021930565096	49.011	0.52636	49.011	48.793	49.32	0.00016785	0.0084095	-1.9595E-05	NaN	27.047	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141870	+		55341	18418	36923	36938							0.060762611917994036
SPVTLRINN	9	Unmodified	_SPVTLRINN_					0	0	0			REV__nc|ENSG00000120616|Q9H2F5-3|EPC1	REV__nc|ENSG00000120616|Q9H2F5-3|EPC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	507.290548	1012.56654	-0.48564	-0.00024636	-1.4674	-0.00074438	-1.953	-0.00099073	507.2899614939492	49.088	0.40392	49.113	48.927	49.331	0.025574	0.11087	-0.0010872	NaN	27.047	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44934	+		55342	18418	36923	36938							0.060762611917994036
SPVVALAIPPP	11	Unmodified	_SPVVALAIPPP_					0	0	0			REV__ENSG00000277058|ENST00000617807|HNRNPCL3	REV__ENSG00000277058|ENST00000617807|HNRNPCL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8208618164062	2	530.823692	1059.63283	-1.3153	-0.00069821	-4.3307	-0.0022989	-5.646	-0.0029971	530.821502391275	82.322	1.7995	82.448	81.931	83.731	0.12601					101	41	4	0	0	0	0.6921	1	7878	7878		32.812	0.85756	1	1875200	+		55343	22323	36924	36939	62646	62646					0.10540077033851958
SPVVFLPP	8	Unmodified	_SPVVFLPP_					0	0	0		ENST00000491028.1_1_13:113745283-113749039:+|nuORF	ENST00000491028.1_1_13:113745283-113749039:+|nuORF	ENST00000491028.1_1_13:113745283-113749039:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.30230712890625	2	428.252372	854.49019	-0.16598	-7.1081E-05	1.1025	0.00047216	0.93655	0.00040108	428.25283260310476	81.139	0.60739	81.561	81.309	81.916	0.4215					21	14	2	0	0	0	0.4196	1	9335	9335		8.2313	0	1	72362			55344	12675	36925	36940	62647	62647					0.057124893624859396
SPVVLPPI	8	Unmodified	_SPVVLPPI_					0	0	0			REV__ENSG00000143537|ENST00000356955|ADAM15	REV__ENSG00000143537|ENST00000356955|ADAM15	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.17578125	2	411.260197	820.50584	2.22	0.000913	-3.2465	-0.0013351	-1.0265	-0.00042215	411.2587722166817	95.795	0.65283	96.216	95.785	96.438	0.42051					23	15	2	0	0	0	0.4196	1	11416	11416		21.702	0	1	78073	+		55345	19820	36926	36941	62648	62648					0.0884077587951424
SPVVNQRKLPK	11	Unmodified	_SPVVNQRKLPK_					0	0	0		ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.59295654296875	3	422.594461	1264.76155	-1.6666	-0.00070429	-1.2985	-0.00054872	-2.965	-0.001253	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.74771	1	4683	4683		22.562	5.3948	1	771770			55346	7945	36927	36942	62649	62649					0.13976431996798055
SPVVNQRKLPK	11	Unmodified	_SPVVNQRKLPK_					0	0	0		ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.59283447265625	3	422.594461	1264.76155	-1.8117	-0.0007656	-1.6807	-0.00071027	-3.4924	-0.0014759	422.59357864263933	54.504	2.542	54.559	53.757	56.299	0.055611					235	90	4	0	0	0	0.74771	2	4510	4510;4604		22.562	2.2466	1	1177200			55347	7945	36927	36942	62650;62651	62650					0.13976431996798055
SPVVNQRKLPK	11	Unmodified	_SPVVNQRKLPK_					0	0	0		ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5923156738281	3	422.594461	1264.76155	-1.8059	-0.00076316	-2.4921	-0.0010531	-4.298	-0.0018163	422.5932330431751	57.933	1.2573	58.013	57.628	58.885	0.079643					127	59	3	0	0	0	0.74771	1	4914	4914		22.562	2.5311	1	268900			55348	7945	36927	36942	62652	62652					0.13976431996798055
SPVVNQRKLPK	11	Unmodified	_SPVVNQRKLPK_					0	0	0		ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.5929260253906	3	422.594461	1264.76155	0.25981	0.00010979	-3.7899	-0.0016016	-3.5301	-0.0014918	422.5926995986668	51.927	1.8648	52.35	51.024	52.889	0.42348					93	44	3	0	0	0	0.74771	2	5175	5175;5192		22.562	0.78116	1	995380			55349	7945	36927	36942	62653;62654	62653					0.13976431996798055
SPVVNQRKLPK	11	Unmodified	_SPVVNQRKLPK_					0	0	0		ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.59228515625	3	422.594461	1264.76155	0.68729	0.00029045	-4.427	-0.0018708	-3.7397	-0.0015804	422.59249256358447	51.682	1.0636	52.35	51.693	52.756	0.66729					66	25	4	0	0	0	0.74022	1	5159	5159		24.232	3.9168	1	1158000			55350	7945	36927	36942	62655	62655					0.13976431996798055
SPWAVIPVF	9	Unmodified	_SPWAVIPVF_					0	0	0		nc|ENSG00000196277|Q14831-5|GRM7;nc|ENSG00000196277|Q14831-3|GRM7;nc|ENSG00000196277|Q14831-4|GRM7;ENSG00000196277|ENST00000357716|GRM7;nc|ENSG00000196277|Q14831-2|GRM7	nc|ENSG00000196277|Q14831-5|GRM7	nc|ENSG00000196277|Q14831-5|GRM7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.30902099609375	2	508.284203	1014.55385	0.52227	0.00026546	2.1961	0.0011162	2.7184	0.0013817	508.2854001734501	16.482	0.32189	15.995	15.867	16.189	-0.48718					8	6	2	0	0	0	0.20789	1	139	139		30.504	0.6621	1	77410			55351	8033	36928	36943	62656	62656					0.04715849799561056
SPWAVIPVF	9	Unmodified	_SPWAVIPVF_					0	0	0		nc|ENSG00000196277|Q14831-5|GRM7;nc|ENSG00000196277|Q14831-3|GRM7;nc|ENSG00000196277|Q14831-4|GRM7;ENSG00000196277|ENST00000357716|GRM7;nc|ENSG00000196277|Q14831-2|GRM7	nc|ENSG00000196277|Q14831-5|GRM7	nc|ENSG00000196277|Q14831-5|GRM7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	508.284203	1014.55385	1.1113	0.00056486	2.1648	0.0011003	3.2761	0.0016652	508.2853066722679	16.467	0.22915	15.868	15.786	16.015	-0.59873	-0.063223	-5.3338E-06	NaN	30.504	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72596			55352	8033	36928	36943							0.04715849799561056
SPWAVLPLF	9	Unmodified	_SPWAVLPLF_					0	0	0		nc|ENSG00000124493|Q14833-3|GRM4;nc|ENSG00000124493|Q14833-2|GRM4;nc|ENSG00000124493|Q14833-4|GRM4;nc|ENSG00000124493|Q14833-5|GRM4;ENSG00000124493|ENST00000538487|GRM4	nc|ENSG00000124493|Q14833-3|GRM4	nc|ENSG00000124493|Q14833-3|GRM4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3154296875	2	515.292028	1028.5695	0.59425	0.00030621	2.9155	0.0015023	3.5097	0.0018085	515.2934465298197	22.739	0.21866	22.128	21.99	22.209	-0.6107					7	4	2	0	0	0	0.20789	1	960	960		25.45	3.7478	1	44789			55353	3336	36929	36944	62657	62657					0.05636136316593365
SPWPRRLRWWR	11	Unmodified	_SPWPRRLRWWR_					0	0	0		ENST00000379561.5_1_13:41240138-41240633:-|nuORF	ENST00000379561.5_1_13:41240138-41240633:-|nuORF	ENST00000379561.5_1_13:41240138-41240633:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	532.6290893554688	3	532.632132	1594.87457	-1.5087	-0.0008036	-2.7968	-0.0014896	-4.3055	-0.0022932	532.6305045187688	110.55	0.77496	110.54	110.1	110.87	-0.0074387					48	22	3	0	0	0	0.81021	1	11792	11792		9.2118	3.513	1	324930			55354	10896	36930	36945	62658	62658					0.10092545233328565
SPYYYSSTSR	10	Unmodified	_SPYYYSSTSR_					0	0	0		ENST00000465084.1_1_2:113976112-113984685:-|nuORF;ENST00000480684.1_1_2:113976112-113977768:-|nuORF;nc|ENSG00000125618|Q06710-2|PAX8;ENSG00000125618|ENST00000429538|PAX8	ENST00000465084.1_1_2:113976112-113984685:-|nuORF	ENST00000465084.1_1_2:113976112-113984685:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	605.775146484375	2	605.772385	1209.53022	-0.024815	-1.5032E-05	3.8001	0.002302	3.7753	0.002287	605.774462948763	67.085	1.1656	67.636	67.246	68.412	0.55071					63	31	3	0	0	0	0.86218	1	7351	7351		32.812	6.1195	1	2325800			55355	3397	36931	36946	62659	62659					-0.06616660495592441
SQAGKGRL	8	Unmodified	_SQAGKGRL_					0	0	0		nc|ENSG00000164318|Q63HQ2|EGFLAM;ENSG00000164318|ENST00000322350|EGFLAM	nc|ENSG00000164318|Q63HQ2|EGFLAM	nc|ENSG00000164318|Q63HQ2|EGFLAM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.73968505859375	2	408.737951	815.46135	-0.047648	-1.9476E-05	4.4202	0.0018067	4.3725	0.0017872	408.73963408946304	36.955	2.5653	36.931	36.681	39.246	-0.023975					119	58	3	0	0	0	0.89494	1	2471	2471		37.159	0	1	457600			55356	5954	36932	36947	62660	62660					0.04623764786038009
SQAKRLIN	8	Unmodified	_SQAKRLIN_					0	0	0		CON__ENSEMBL:ENSBTAP00000013050	CON__ENSEMBL:ENSBTAP00000013050	CON__ENSEMBL:ENSBTAP00000013050	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.2799377441406	2	465.279983	928.545414	0.66247	0.00030823	-0.6483	-0.00030164	0.014172	6.5939E-06	465.27955521005777	88.84	2.0285	88.99	88.523	90.552	0.15055					102	47	4	0	0	0	0.86677	2	8865	8853;8865		30.504	5.9996	1	1291300		+	55357	563	36933	36948	62661;62662	62662					0.07828295882950442
SQAQLRLK	8	Unmodified	_SQAQLRLK_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2879638671875	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.87479	1	12644	12644		30.504	6.3009	1	3080300	+		55358	22068	36934	36949	62663	62663					0.0874858239999412
SQARRPRA	8	Unmodified	_SQARRPRA_					0	0	0		ENST00000370693.5_1_6:57037210-57037405:+|nuORF	ENST00000370693.5_1_6:57037210-57037405:+|nuORF	ENST00000370693.5_1_6:57037210-57037405:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.76873779296875	2	471.273024	940.531495	-1.0104	-0.00047618	-4.2482	-0.0020021	-5.2586	-0.0024782	471.2709029703231	53.733	0.86242	53.781	53.484	54.347	0.047802					35	26	2	0	0	0	0.4196	1	4390	4390		27.882	0	1	148340			55359	10643	36935	36950	62664	62664					0.05885063174514471
SQASSKIL	8	Unmodified	_SQASSKIL_					0	0	0		ENSG00000159596|ENST00000372025|TMEM69	ENSG00000159596|ENST00000372025|TMEM69	ENSG00000159596|ENST00000372025|TMEM69	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.23974609375	2	417.239993	832.465432	-1.1717	-0.00048886	-1.3676	-0.00057062	-2.5392	-0.0010595	417.23924184101116	88.678	1.8374	88.678	88.117	89.954	0					78	42	3	0	0	0	0.91472	1	8578	8578		44.117	8.4985	1	977120			55360	5537	36936	36951	62665	62665					0.04249809489101608
SQAVLLTLKRH	11	Unmodified	_SQAVLLTLKRH_					0	0	0			REV__ENST00000478269.5_1_3:50380731-50381380:-|nuORF	REV__ENST00000478269.5_1_3:50380731-50381380:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.59234619140625	3	422.594461	1264.76155	-1.8042	-0.00076245	-2.4196	-0.0010225	-4.2238	-0.001785	422.5932950811883	59.075	0.77283	59.162	58.98	59.753	0.087002					44	25	2	0	0	0	0.76087	1	5045	5045		19.627	0.36425	1	123610	+		55361	16065	36937	36952	62666	62666					0.13976431996798055
SQCCRKGPG	9	Unmodified	_SQCCRKGPG_					0	0	0			REV__nc|ENSG00000101901|Q9NP73-4|ALG13	REV__nc|ENSG00000101901|Q9NP73-4|ALG13	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2113342285156	2	468.212929	934.411305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.495	1	70.457	69.957	70.957	-0.037865								0	0	0	0.28009	1	6841	6841		39.253	3.6345	1		+		55362	17310	36938	36953	62667	62667					-0.05852429205765475
SQCTCDYH	8	Unmodified	_SQCTCDYH_					0	0	0		nc|ENSG00000183423|Q3SXY7-2|LRIT3;ENSG00000183423|ENST00000594814|LRIT3	nc|ENSG00000183423|Q3SXY7-2|LRIT3	nc|ENSG00000183423|Q3SXY7-2|LRIT3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.66455078125	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.019	1	70.403	69.903	70.903	0.38416								0	0	0	0.29452	1	7746	7746		33.516	3.0119	1				55363	7531	36939	36954	62668	62668					-0.16304407467623605
SQCTCDYH	8	Unmodified	_SQCTCDYH_					0	0	0		nc|ENSG00000183423|Q3SXY7-2|LRIT3;ENSG00000183423|ENST00000594814|LRIT3	nc|ENSG00000183423|Q3SXY7-2|LRIT3	nc|ENSG00000183423|Q3SXY7-2|LRIT3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.66436767578125	2	478.665477	955.316401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.755	1	71.139	70.639	71.639	0.38416								0	0	0	0.30252	1	7851	7851		19.36	1.995	1				55364	7531	36939	36954	62669	62669					-0.16304407467623605
SQDESHVHW	9	Unmodified	_SQDESHVHW_					0	0	0			REV__ENST00000487264.5_1_19:59097551-59102983:+|nuORF	REV__ENST00000487264.5_1_19:59097551-59102983:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	562.741943359375	2	562.741419	1123.46829	-0.66759	-0.00037568	0.66054	0.00037171	-0.0070455	-3.9648E-06	562.7415891399206	37.35	0.7532	37.297	36.872	37.625	-0.053558					30	16	3	0	0	0	0.58151	1	2546	2546		47.916	3.5384	1	162090	+		55365	27572	36940	36955	62670	62670					-0.08850967124044473
SQEAPLHDP	9	Unmodified	_SQEAPLHDP_					0	0	0		nc|ENSG00000165272|Q92482-2|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.2356262207031	2	497.235439	992.456324	-0.97912	-0.00048685	1.0868	0.00054038	0.10766	5.3531E-05	497.2358257627969	30.388	0.94661	30.373	29.891	30.837	-0.015167					56	23	3	0	0	0	0.72402	1	1621	1621		38.806	0	1	279140			55366	15067	36941	36956	62671	62671					-0.04020583867247751
SQEYAPGYNG	10	Unmodified	_SQEYAPGYNG_					0	0	0		ENSG00000182263|ENST00000333129|FIGN	ENSG00000182263|ENST00000333129|FIGN	ENSG00000182263|ENST00000333129|FIGN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2291259765625	2	543.230353	1084.44615	-0.52779	-0.00028671	-2.9258	-0.0015894	-3.4536	-0.0018761	543.2285382273271	55.936	0.69196	56.337	56.033	56.725	0.40102					37	18	3	0	0	0	0.85981	1	5785	5785		35.152	4.6484	1	3264800			55367	7442	36942	36957	62672	62672					-0.09269191592466086
SQFVDLKAS	9	Unmodified	_SQFVDLKAS_					0	0	0			REV__nc|ENSG00000144674|Q13439-3|GOLGA4	REV__nc|ENSG00000144674|Q13439-3|GOLGA4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.7649230957031	2	497.763832	993.513111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.869	1	43.842	43.342	44.342	-0.026764								0	0	0	0.32758	1	3369	3369		20.947	0	1		+		55368	19907	36943	36958	62673	62673					0.01609463689283075
SQGALPAKKRR	11	Unmodified	_SQGALPAKKRR_					0	0	0		nc|ENSG00000169994|Q6PIF6-2|MYO7B;nc|ENSG00000169994|Q6PIF6|MYO7B;ENSG00000169994|ENST00000409816|MYO7B	nc|ENSG00000169994|Q6PIF6-2|MYO7B	nc|ENSG00000169994|Q6PIF6-2|MYO7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.3699340820312	2	606.370195	1210.72584	-0.02762	-1.6748E-05	-1.0617	-0.00064376	-1.0893	-0.0006605	606.3694476526515	94.093	3.5324	94.139	93.078	96.61	0.045456					200	83	3	0	0	0	0.72106	1	9854	9854		28.081	9.8194	1	863170			55369	15086	36944	36959	62674	62674					0.12890394539772387
SQGLVHRDIKL	11	Unmodified	_SQGLVHRDIKL_					0	0	0		ENSG00000133059|ENST00000367162|DSTYK;nc|ENSG00000133059|Q6XUX3-2|DSTYK	ENSG00000133059|ENST00000367162|DSTYK	ENSG00000133059|ENST00000367162|DSTYK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5818786621094	3	422.582333	1264.72517	-0.18543	-7.8358E-05	-0.58125	-0.00024563	-0.76668	-0.00032399	422.58203704906714	97.831	3.5899	97.888	96.517	100.11	0.056831					202	83	4	0	0	0	0.72739	1	10368	10368		30.139	14.218	1	436660			55370	3852	36945	36960	62675	62675					0.1033955510006308
SQGMWEWAD	9	Unmodified	_SQGMWEWAD_					0	0	0		ENST00000533105.1_1_11:47600795-47602306:+|nuORF	ENST00000533105.1_1_11:47600795-47602306:+|nuORF	ENST00000533105.1_1_11:47600795-47602306:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.2225341796875	2	555.221474	1108.42839	0.47586	0.00026421	2.7708	0.0015384	3.2467	0.0018026	555.2229366074037	76.69	0.49088	76.738	76.324	76.815	0.047974					33	20	2	0	0	0	0.6204	1	7481	7481		45.972	4.5456	1	166340			55371	13391	36946	36961	62676	62676					-0.12148230118987158
SQGPISKPK	9	Unmodified	_SQGPISKPK_					0	0	0		nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-4|BRD2;nc|ENSG00000204256|P25440-3|BRD2;ENSG00000204256|ENST00000374825|BRD2;ENST00000463639.1_1_6:32945329-32946166:+|nuORF	nc|ENSG00000204256|P25440-2|BRD2	nc|ENSG00000204256|P25440-2|BRD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.27392578125	2	471.274367	940.53418	0.61466	0.00028967	-0.22382	-0.00010548	0.39084	0.00018419	471.27408636073557	19.178	0.60669	18.708	18.459	19.065	-0.46967					23	13	3	0	0	0	0.68711	1	484	484		41.427	4.2675	1	121240			55372	15207	36947	36962	62677	62677					0.0615347378881097
SQGSKPALP	9	Unmodified	_SQGSKPALP_					0	0	0		nc|ENSG00000166436|O15016-3|TRIM66;ENST00000481014.6_1_11:8646046-8673385:-|nuORF;nc|ENSG00000166436|O15016-2|TRIM66;nc|ENSG00000166436|O15016|TRIM66;ENSG00000166436|ENST00000646038|TRIM66	nc|ENSG00000166436|O15016-3|TRIM66	nc|ENSG00000166436|O15016-3|TRIM66	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.7447204589844	2	442.745442	883.476331	-0.15287	-6.7681E-05	-1.1117	-0.00049222	-1.2646	-0.0005599	442.7447912211249	89.714	0.69885	89.782	89.384	90.083	0.068703					38	15	3	0	0	0	0.77244	1	9174	9174		32.812	2.3088	1	674190			55373	6196	36948	36963	62678	62678					0.029932118633610116
SQHEKTHT	8	Unmodified	_SQHEKTHT_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.23309326171875	2	484.23323	966.451907	0.84969	0.00041145	-0.8013	-0.00038802	0.048386	2.343E-05	484.2327183120764	21.724	1.2506	21.788	21.289	22.539	0.064745					110	44	4	0	0	0	0.73851	1	602	602		65.803	4.8312	1	903290			55374	3524	36949	36964	62679	62679					-0.032660482901405885
SQHEKTHT	8	Unmodified	_SQHEKTHT_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2330322265625	2	484.23323	966.451907	0.53423	0.00025869	-0.66811	-0.00032352	-0.13388	-6.4827E-05	484.2328344963672	23.219	1.5737	22.644	22.068	23.641	-0.57415					75	37	3	0	0	0	0.9295	1	1024	1024		55.504	2.1528	1	1837400			55375	3524	36949	36964	62680	62680					-0.032660482901405885
SQHGGPAAS	9	Unmodified	_SQHGGPAAS_					0	0	0		ENST00000221466.9_1_19:50015996-50017250:+|nuORF	ENST00000221466.9_1_19:50015996-50017250:+|nuORF	ENST00000221466.9_1_19:50015996-50017250:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2485656738281	2	406.188291	810.36203	-1.172	-0.00047603	1.4347	0.00058274	0.2627	0.00010671	406.1887376152283	88.61	0.7516	88.61	88.249	89	0					24	17	2	0	0	0	0.20789	1	8568	8568		25.574	11.799	1	111420			55376	9170	36950	36965	62681	62681					-0.05073677898712958
SQHRDLRR	8	Unmodified	_SQHRDLRR_					0	0	0			REV__ENST00000500890.6_1_4:155548153-155548246:+|nuORF	REV__ENST00000500890.6_1_4:155548153-155548246:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.28759765625	2	534.294488	1066.57442	0.26966	0.00014408	0.44887	0.00023983	0.71853	0.00038391	534.2943598127905	86.326	1.4379	86.769	86.2	87.638	0.44331					58	34	2	0	0	0	0.4196	1	10055	10055		25.574	0	1	96042	+		55377	27807	36951	36966	62682	62682					0.043798332319511246
SQHSDSGNYTC	11	Unmodified	_SQHSDSGNYTC_					0	0	0		nc|ENSG00000143341|Q96RW7-2|HMCN1;ENSG00000143341|ENST00000271588|HMCN1	nc|ENSG00000143341|Q96RW7-2|HMCN1	nc|ENSG00000143341|Q96RW7-2|HMCN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.1954345703125	3	400.152498	1197.43566	-0.12696	-5.0804E-05	-0.94298	-0.00037734	-1.0699	-0.00042814	400.1530551208353	81.694	0.34824	82.194	82.033	82.381	0.49966					9	8	2	0	0	0	0.1751	1	9448	9448		35.178	21.041	1	105740			55378	4621	36952	36967	62683	62683					-0.15515542309208286
SQIAHLVQHQ	10	Unmodified	_SQIAHLVQHQ_					0	0	0		ENSG00000197016|ENST00000330619|ZNF470;nc|ENSG00000197016|Q6ECI4-2|ZNF470	ENSG00000197016|ENST00000330619|ZNF470	ENSG00000197016|ENST00000330619|ZNF470	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8112182617188	2	580.812179	1159.60981	-0.99952	-0.00058053	1.4282	0.00082954	0.42872	0.00024901	580.8127459194691	86.348	0.77129	86.791	86.49	87.262	0.44331					32	18	2	0	0	0	0.57924	1	10121	10121		51.193	0	1	670960			55379	8123	36953	36968	62684	62684					0.03638450969060614
SQIAHLVQHQ	10	Unmodified	_SQIAHLVQHQ_					0	0	0		ENSG00000197016|ENST00000330619|ZNF470;nc|ENSG00000197016|Q6ECI4-2|ZNF470	ENSG00000197016|ENST00000330619|ZNF470	ENSG00000197016|ENST00000330619|ZNF470	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	580.812179	1159.60981	-1.2577	-0.00073047	1.7018	0.00098842	0.44412	0.00025795	580.8130392458397	86.399	0.77026	86.853	86.575	87.345	0.4543	0.030958	0.00016978	NaN	51.193	33	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	659380			55380	8123	36953	36968							0.03638450969060614
SQILINLVSDK	11	Unmodified	_SQILINLVSDK_					0	0	0			REV__ENSG00000143624|ENST00000318967|INTS3	REV__ENSG00000143624|ENST00000318967|INTS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.3573608398438	2	615.358628	1228.7027	-0.35839	-0.00022054	-1.6201	-0.00099692	-1.9785	-0.0012175	615.3576084899992	104.75	2.3818	104.73	104.28	106.66	-0.014809					147	56	4	0	0	0	0.7144	1	11298	11298		29.17	0	1	1933000	+		55381	19828	36954	36969	62685	62685					0.09749910911796178
SQILPILEVF	10	Unmodified	_SQILPILEVF_					0	0	0		ENST00000429089.6_1_8:42033183-42033450:-|nuORF	ENST00000429089.6_1_8:42033183-42033450:-|nuORF	ENST00000429089.6_1_8:42033183-42033450:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	579.8446044921875	2	579.842082	1157.66961	-0.30572	-0.00017727	3.2826	0.0019034	2.9769	0.0017261	579.8442285460155	102.54	1.4926	102.54	101.62	103.11	0					80	37	4	0	0	0	0.86718	1	10467	10467		27.882	6.1965	1	838830			55382	11600	36955	36970	62686	62686					0.09708328859755966
SQILPILEVF	10	Unmodified	_SQILPILEVF_					0	0	0		ENST00000429089.6_1_8:42033183-42033450:-|nuORF	ENST00000429089.6_1_8:42033183-42033450:-|nuORF	ENST00000429089.6_1_8:42033183-42033450:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.843994140625	2	579.842082	1157.66961	3.115	0.0018062	-0.095038	-5.5107E-05	3.0199	0.0017511	579.8421153406522	102.31	1.4996	102.26	101.49	102.99	-0.047005					86	35	4	0	0	0	0.8651	1	11221	11221		25.574	2.0514	1	1243200			55383	11600	36955	36970	62687	62687					0.09708328859755966
SQIRLRFR	8	Unmodified	_SQIRLRFR_					0	0	0		ENST00000310653.10_2_11:73471884-73472109:-|nuORF	ENST00000310653.10_2_11:73471884-73472109:-|nuORF	ENST00000310653.10_2_11:73471884-73472109:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3264770507812	2	538.327799	1074.64105	1.246	0.00067076	-2.9722	-0.0016	-1.7262	-0.00092924	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.86677	1	10789	10789		27.882	4.8398	1	76567000			55384	9909	36956	36971	62688	62688					0.1067106879381754
SQITVQAAKGT	11	Unmodified	_SQITVQAAKGT_					0	0	0			REV__ENSG00000175899|ENST00000318602|A2M	REV__ENSG00000175899|ENST00000318602|A2M	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.304931640625	2	552.306395	1102.59824	1.2817	0.0007079	-1.3256	-0.00073213	-0.043866	-2.4228E-05	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.66009	1	9830	9830		37.508	3.5865	1	1712700	+		55385	22090	36957	36972	62689	62689					0.05104209155092576
SQKAFHLA	8	Unmodified	_SQKAFHLA_					0	0	0			REV__ENSG00000196199|ENST00000361479|MPHOSPH8	REV__ENSG00000196199|ENST00000361479|MPHOSPH8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2485656738281	2	451.248152	900.481751	-1.5029	-0.0006782	3.2139	0.0014503	1.711	0.00077208	451.24948444631724	65.955	1.2112	65.955	65.412	66.623	0					127	65	2	0	0	0	0.84341	1	5791	5791		24.203	0	1	815400	+		55386	23103	36958	36973	62690	62690					0.02752935445857929
SQKAKRKA	8	Unmodified	_SQKAKRKA_					0	0	0			REV__ENST00000492435.1_1_3:8669382-8671410:-|nuORF	REV__ENST00000492435.1_1_3:8669382-8671410:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	458.78759765625	2	458.787976	915.561398	0.80291	0.00036836	-2.0972	-0.00096216	-1.2943	-0.00059379	458.7870101504016	92.972	4.4564	93.018	92.411	96.867	0.045448					249	105	5	0	0	0	0.89494	1	9804	9804		37.159	2.9866	1	17992000	+		55387	18625	36959	36974	62691	62691					0.10024002119848774
SQKALLLTFV	10	Unmodified	_SQKALLLTFV_					0	0	0			REV__ENST00000527824.1_1_17:45663016-45663064:+|nuORF	REV__ENST00000527824.1_1_17:45663016-45663064:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.34033203125	2	560.342249	1118.66995	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.65	1	106.61	106.11	107.11	-0.032913								0	0	0	0.45132	1	11581	11581		31.53	1.0262	1		+		55388	28235	36960	36975	62692	62692					0.11535748579603933
SQKALLLTFV	10	Unmodified	_SQKALLLTFV_					0	0	0			REV__ENST00000527824.1_1_17:45663016-45663064:+|nuORF	REV__ENST00000527824.1_1_17:45663016-45663064:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.34033203125	2	560.342249	1118.66995	-1.4184	-0.00079481	-2.3281	-0.0013045	-3.7465	-0.0020993	560.3408991920513	102.18	3.487	102.32	101.71	105.2	0.13569					387	86	7	0	0	0	0.86348	1	10983	10983		31.53	3.6476	1	120110000	+		55389	28235	36960	36975	62693	62693					0.11535748579603933
SQKALLLTFV	10	Unmodified	_SQKALLLTFV_					0	0	0			REV__ENST00000527824.1_1_17:45663016-45663064:+|nuORF	REV__ENST00000527824.1_1_17:45663016-45663064:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3404541015625	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.86272	2	12164	12164;12496		24.519	1.9395	1	4071000	+		55390	28235	36960	36975	62694;62695	62694					0.11535748579603933
SQKKLRARGVV	11	Unmodified	_SQKKLRARGVV_					0	0	0		ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR	ENSG00000116984|ENST00000366577|MTR	ENSG00000116984|ENST00000366577|MTR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3925170898438	2	621.39367	1240.77279	-0.28789	-0.0001789	-1.2764	-0.00079315	-1.5643	-0.00097204	621.392781910036	104.72	2.6015	104.71	104.23	106.84	-0.014809					230	61	5	0	0	0	0.76699	1	11256	11256		18.262	0	1	11881000			55391	2957	36961	36976	62696	62696					0.16203254090919472
SQKKRGLN	8	Unmodified	_SQKKRGLN_					0	0	0		ENST00000368874.8_2_1:151264284-151264482:-|nuORF	ENST00000368874.8_2_1:151264284-151264482:-|nuORF	ENST00000368874.8_2_1:151264284-151264482:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7771301269531	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.04	1	80.04	79.54	80.54	0								0	0	0	0.29871	1	7378	7378		23.042	0	1				55392	10604	36962	36977	62697	62697					0.07307411740180214
SQKKRGLN	8	Unmodified	_SQKKRGLN_					0	0	0		ENST00000368874.8_2_1:151264284-151264482:-|nuORF	ENST00000368874.8_2_1:151264284-151264482:-|nuORF	ENST00000368874.8_2_1:151264284-151264482:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7776184082031	2	465.777608	929.540663	-0.69238	-0.0003225	0.76957	0.00035845	0.077191	3.5954E-05	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.87064	1	9418	9418		29.15	1.2673	1	927810			55393	10604	36962	36977	62698	62698					0.07307411740180214
SQKKTRLGT	9	Unmodified	_SQKKTRLGT_					0	0	0		ENST00000357606.7_1_12:56221676-56222300:-|nuORF	ENST00000357606.7_1_12:56221676-56222300:-|nuORF	ENST00000357606.7_1_12:56221676-56222300:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8036804199219	2	509.803823	1017.59309	0.66528	0.00033916	-0.96062	-0.00048973	-0.29535	-0.00015057	509.80330176373235	84.326	2.5006	84.474	83.057	85.557	0.14794					163	57	4	0	0	0	0.7932	1	8340	8340		23.523	0	1	928020			55394	10391	36963	36978	62699	62699					0.08499950083125896
SQKKTRLGT	9	Unmodified	_SQKKTRLGT_					0	0	0		ENST00000357606.7_1_12:56221676-56222300:-|nuORF	ENST00000357606.7_1_12:56221676-56222300:-|nuORF	ENST00000357606.7_1_12:56221676-56222300:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8036193847656	2	509.803823	1017.59309	-1.4574	-0.000743	1.1751	0.00059908	-0.2823	-0.00014392	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.77244	2	8092	8092;8128		32.812	2.5316	1	920080			55395	10391	36963	36978	62700;62701	62700					0.08499950083125896
SQKKTRLGT	9	Unmodified	_SQKKTRLGT_					0	0	0		ENST00000357606.7_1_12:56221676-56222300:-|nuORF	ENST00000357606.7_1_12:56221676-56222300:-|nuORF	ENST00000357606.7_1_12:56221676-56222300:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.803466796875	2	509.803823	1017.59309	0.31699	0.0001616	-0.53209	-0.00027126	-0.2151	-0.00010966	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.58063	1	10258	10258		47.96	1.9873	1	2635100			55396	10391	36963	36978	62702	62702					0.08499950083125896
SQKKTRLGT	9	Unmodified	_SQKKTRLGT_					0	0	0		ENST00000357606.7_1_12:56221676-56222300:-|nuORF	ENST00000357606.7_1_12:56221676-56222300:-|nuORF	ENST00000357606.7_1_12:56221676-56222300:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8030700683594	2	509.803823	1017.59309	-0.073626	-3.7535E-05	-0.14793	-7.5416E-05	-0.22156	-0.00011295	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.66686	1	10300	10300		42.864	7.246	1	3087300			55397	10391	36963	36978	62703	62703					0.08499950083125896
SQKLKTTYKAS	11	Unmodified	_SQKLKTTYKAS_					0	0	0		nc|ENSG00000047056|Q9Y2I8-2|WDR37;ENSG00000047056|ENST00000263150|WDR37;nc|ENSG00000047056|Q9Y2I8-3|WDR37	nc|ENSG00000047056|Q9Y2I8-2|WDR37	nc|ENSG00000047056|Q9Y2I8-2|WDR37	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.9068908691406	3	418.906594	1253.69795	0.16212	6.7912E-05	0.4762	0.00019948	0.63832	0.00026739	418.9068490273958	19.928	0.55193	19.298	19.075	19.627	-0.6296					22	11	2	0	0	0	0.70584	1	588	588		33.542	10.98	1	139680			55398	954	36964	36979	62704	62704					0.08125026769039323
SQKLKTTYKAS	11	Unmodified	_SQKLKTTYKAS_					0	0	0		nc|ENSG00000047056|Q9Y2I8-2|WDR37;ENSG00000047056|ENST00000263150|WDR37;nc|ENSG00000047056|Q9Y2I8-3|WDR37	nc|ENSG00000047056|Q9Y2I8-2|WDR37	nc|ENSG00000047056|Q9Y2I8-2|WDR37	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	418.906594	1253.69795	0.90217	0.00037793	-1.4987	-0.00062782	-0.59652	-0.00024989	419.23975379990225	19.625	0.32899	19.696	19.51	19.839	0.071127	0.2567	-0.0018961	NaN	33.542	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16742			55399	954	36964	36979							0.08125026769039323
SQKSLLTV	8	Unmodified	_SQKSLLTV_					0	0	0		ENSG00000196458|ENST00000360187|ZNF605;nc|ENSG00000196458|Q86T29-2|ZNF605	ENSG00000196458|ENST00000360187|ZNF605	ENSG00000196458|ENST00000360187|ZNF605	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2619934082031	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.81897	1	3238	3238		20.947	0	1	5350400			55400	8060	36965	36980	62705	62705					0.07010669040221273
SQKWFITSK	9	Unmodified	_SQKWFITSK_					0	0	0		ENST00000338205.9_1_9:114178619-114180212:-|nuORF	ENST00000338205.9_1_9:114178619-114180212:-|nuORF	ENST00000338205.9_1_9:114178619-114180212:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.8046875	2	562.808574	1123.60259	0.012322	6.9348E-06	-3.837	-0.0021595	-3.8247	-0.0021526	562.8063517571924	34.125	0.55499	34.127	33.872	34.427	0.0026054					18	11	2	0	0	0	0.75725	1	2063	2063		36.447	2.5251	1	69199			55401	10198	36966	36981	62706	62706					0.04573718368646951
SQLARLGKYTF	11	Unmodified	_SQLARLGKYTF_					0	0	0			REV__ENSG00000101417|ENST00000409299|PXMP4	REV__ENSG00000101417|ENST00000409299|PXMP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3640747070312	2	642.358962	1282.70337	2.6961	0.0017318	4.4249	0.0028424	7.121	0.0045742	642.36271081433	110.08	0.59441	110.05	109.92	110.52	-0.027634					42	20	3	0	0	0	0.65746	1	12206	12206		37.812	1.3648	1	193120	+		55402	17278	36967	36982	62707	62707					0.0733275035152019
SQLARLGKYTF	11	Unmodified	_SQLARLGKYTF_					0	0	0			REV__ENSG00000101417|ENST00000409299|PXMP4	REV__ENSG00000101417|ENST00000409299|PXMP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.3638916015625	2	642.358962	1282.70337	1.6043	0.0010305	4.0273	0.002587	5.6316	0.0036175	642.3621659530644	110.8	0.90775	110.92	110.61	111.52	0.11658					128	36	4	0	0	0	0.61369	1	11943	11943		42.864	3.6114	1	486380	+		55403	17278	36967	36982	62708	62708					0.0733275035152019
SQLARLGKYTF	11	Unmodified	_SQLARLGKYTF_					0	0	0			REV__ENSG00000101417|ENST00000409299|PXMP4	REV__ENSG00000101417|ENST00000409299|PXMP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	642.362060546875	2	642.358962	1282.70337	2.0883	0.0013414	3.63	0.0023318	5.7183	0.0036732	642.3608064218109	112.21	4.9435	112.24	112.06	117	0.030602					291	230	2	0	0	0	0.60058	1	13787	13787		44.377	6.5657	1	12073000	+		55404	17278	36967	36982	62709	62709					0.0733275035152019
SQLARLGKYTF	11	Unmodified	_SQLARLGKYTF_					0	0	0			REV__ENSG00000101417|ENST00000409299|PXMP4	REV__ENSG00000101417|ENST00000409299|PXMP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3638305664062	2	642.358962	1282.70337	7.1448	0.0045895	-2.0976	-0.0013474	5.0473	0.0032422	642.3585751725324	110.49	1.1397	110.55	110.17	111.3	0.058884					162	41	4	0	0	0	0.51007	2	13442	13442;13457		51.193	3.2771	1	2259100	+		55405	17278	36967	36982	62710;62711	62710					0.0733275035152019
SQLGVTKPLQA	11	Unmodified	_SQLGVTKPLQA_					0	0	0			REV__nc|ENSG00000136099|O95206-2|PCDH8	REV__nc|ENSG00000136099|O95206-2|PCDH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.3313598632812	2	571.332413	1140.65027	-1.3827	-0.00078998	-1.153	-0.00065874	-2.5357	-0.0014487	571.3317717910289	102.19	3.5699	102.32	101.59	105.16	0.1357					156	88	4	0	0	0	0.72106	1	10706	10706		28.081	2.5074	1	3715400	+		55406	19286	36968	36983	62712	62712					0.08557372568861865
SQLKMFLD	8	Unmodified	_SQLKMFLD_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;ENST00000488988.5_1_3:52422617-52433783:+|nuORF;ENST00000486752.5_1_3:52422617-52434459:+|nuORF	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.26739501953125	2	491.257328	980.500103	0.81333	0.00039955	-4.1483	-0.0020379	-3.335	-0.0016383	491.2549991182985	84.799	1.9566	84.727	83.496	85.453	-0.07196					66	44	2	0	0	0	0.4196	1	8672	8672		21.96	5.4867	1	67993			55407	2792	36969	36984	62713	62713					0.00907309305534909
SQLKSLISR	9	Unmodified	_SQLKSLISR_					0	0	0			REV__ENSG00000225968|ENST00000424383|ELFN1	REV__ENSG00000225968|ENST00000424383|ELFN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.313720703125	2	516.314023	1030.61349	3.1012	0.0016012	-3.1554	-0.0016292	-0.054235	-2.8002E-05	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.7932	1	13242	13242		25.574	0	1	1162600	+		55408	23742	36970	36985	62714	62714					0.09941120742928433
SQLKVESPP	9	Unmodified	_SQLKVESPP_					0	0	0			REV__ENSG00000163156|ENST00000368905|SCNM1	REV__ENSG00000163156|ENST00000368905|SCNM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.7758483886719	2	492.771657	983.528761	-0.093111	-4.5883E-05	4.3418	0.0021395	4.2487	0.0020936	492.7735916446962	63.724	0.38917	63.69	63.461	63.85	-0.034252					22	14	2	0	0	0	0.7932	1	6046	6046		26.693	2.4902	1	60856	+		55409	20886	36971	36986	62715	62715					0.03633750206336117
SQLLEHGLDLE	11	Unmodified	_SQLLEHGLDLE_					0	0	0		nc|ENSG00000171126|Q8TAE7-2|KCNG3;chr2:42444579-42492870|54|18.37|0.38|5.6|-|ENST00000394973|KCNG3,KCNG3;ENSG00000171126|ENST00000306078|KCNG3	nc|ENSG00000171126|Q8TAE7-2|KCNG3	nc|ENSG00000171126|Q8TAE7-2|KCNG3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.31982421875	2	627.322242	1252.62993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.05	1	62.08	61.58	62.58	0.029575								0	0	0	0.56276	1	5796	5796		41.427	3.6151	1				55410	338	36972	36987	62716	62716					0.013721571183623382
SQLPLLEL	8	Unmodified	_SQLPLLEL_					0	0	0		ENST00000329548.4_1_12:53647079-53647169:+|nuORF	ENST00000329548.4_1_12:53647079-53647169:+|nuORF	ENST00000329548.4_1_12:53647079-53647169:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7726135253906	2	456.773668	911.532783	-0.13169	-6.0151E-05	-2.8754	-0.0013134	-3.0071	-0.0013736	456.7722620961799	90.094	1.9861	90.163	89.17	91.156	0.068703					88	46	4	0	0	0	0.88601	1	9234	9234		34.173	0.65696	1	947820			55411	10102	36973	36988	62717	62717					0.07347839700048553
SQLPPLPPTAL	11	Unmodified	_SQLPPLPPTAL_					0	0	0			REV__nc|ENSG00000119866|Q9H165-2|BCL11A	REV__nc|ENSG00000119866|Q9H165-2|BCL11A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3302612304688	2	567.331882	1132.64921	-0.50942	-0.00028901	-1.8517	-0.0010506	-2.3612	-0.0013396	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.66929	1	10576	10576		36.447	4.9169	1	5685000	+		55412	18381	36974	36989	62718	62718					0.08819158199935373
SQLQRECYLK	10	Unmodified	_SQLQRECYLK_					0	0	0		ENSG00000113739|ENST00000265087|STC2	ENSG00000113739|ENST00000265087|STC2	ENSG00000113739|ENST00000265087|STC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.3275146484375	2	634.326805	1266.63906	-0.64623	-0.00040992	-1.9001	-0.0012053	-2.5463	-0.0016152	634.3256591213016	59.511	1.0707	59.511	59.145	60.216	0					116	43	4	0	0	0	0.38353	1	5214	5214		65.465	19.009	1	1731800			55413	2741	36975	36990	62719	62719					0.01640227203051836
SQLRAGGK	8	Unmodified	_SQLRAGGK_					0	0	0			REV__ENST00000592399.5_1_17:76130956-76132740:+|nuORF	REV__ENST00000592399.5_1_17:76130956-76132740:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7391357421875	2	408.737951	815.46135	0.14715	6.0146E-05	4.0233	0.0016445	4.1704	0.0017046	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.85277	1	2053	2053		25.45	0	1	1448600	+		55414	29211	36976	36991	62720	62720					0.04623764786049378
SQLRGPIPRLA	11	Unmodified	_SQLRGPIPRLA_					0	0	0			REV__chr3:25060176-25132161|21|14.1|0.0|12.07|+|2|RARB,RARB|2	REV__chr3:25060176-25132161|21|14.1|0.0|12.07|+|2|RARB,RARB|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2467041015625	3	403.247173	1206.71969	2.718	0.001096	-3.4576	-0.0013942	-0.73958	-0.00029823	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.74763	1	11607	11607		20.315	0	1	15597000	+		55415	15807	36977	36992	62721	62721					0.12459876308275852
SQLRGPIPRLA	11	Unmodified	_SQLRGPIPRLA_					0	0	0			REV__chr3:25060176-25132161|21|14.1|0.0|12.07|+|2|RARB,RARB|2	REV__chr3:25060176-25132161|21|14.1|0.0|12.07|+|2|RARB,RARB|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.2469177246094	3	403.247173	1206.71969	3.1806	0.0012826	-3.8089	-0.0015359	-0.62832	-0.00025337	403.2455898338112	104.57	4.2773	104.61	103.55	107.83	0.039864					310	101	5	0	0	0	0.75164	1	11454	11454		19.627	0.36425	1	15278000	+		55416	15807	36977	36992	62722	62722					0.12459876308275852
SQLRGPIPRLA	11	Unmodified	_SQLRGPIPRLA_					0	0	0			REV__chr3:25060176-25132161|21|14.1|0.0|12.07|+|2|RARB,RARB|2	REV__chr3:25060176-25132161|21|14.1|0.0|12.07|+|2|RARB,RARB|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3651123046875	2	604.367121	1206.71969	-1.2751	-0.00077064	0.82667	0.00049961	-0.44844	-0.00027102	604.3675622774762	107.87	0.68172	107.91	107.29	107.97	0.036125					51	16	4	0	0	0	0.72106	1	11514	11514		28.081	4.5588	1	15923000	+		55417	15807	36977	36992	62723	62723					0.12459876308275852
SQLRLALSN	9	Unmodified	_SQLRLALSN_					0	0	0			REV__ENST00000447214.6_1_11:15209769-15267583:+|nuORF	REV__ENST00000447214.6_1_11:15209769-15267583:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904357910156	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.78528	1	8655	8655		29.17	2.4771	1	9565500	+		55418	26815	36978	36993	62724	62724					0.06628261191781348
SQLRLLLPDS	10	Unmodified	_SQLRLLLPDS_					0	0	0		CON__P01030;CON__ENSEMBL:ENSBTAP00000007350	CON__P01030	CON__P01030	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	571.3309326171875	2	571.332413	1140.65027	-0.35036	-0.00020017	-1.9792	-0.0011308	-2.3296	-0.001331	571.3312644155609	102.52	1.12	102.52	102.02	103.14	0					76	28	4	0	0	0	0.86698	1	10453	10453		28.081	0.19925	1	1839200		+	55419	562	36979	36994	62725	62725					0.08557372568861865
SQLRLLLPDS	10	Unmodified	_SQLRLLLPDS_					0	0	0		CON__P01030;CON__ENSEMBL:ENSBTAP00000007350	CON__P01030	CON__P01030	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.3306274414062	2	571.332413	1140.65027	-1.3827	-0.00078998	-1.153	-0.00065874	-2.5357	-0.0014487	571.3317717910289	102.19	3.5699	102.32	101.59	105.16	0.1357					156	88	4	0	0	0	0.86272	1	10755	10755		24.519	0.31644	1	3715400		+	55420	562	36979	36994	62726	62726					0.08557372568861865
SQLRLTPGLRK	11	Unmodified	_SQLRLTPGLRK_					0	0	0		ENST00000474534.1_1_9:131798902-131809484:+|nuORF;nc|ENSG00000148343|Q7L4E1-2|MIGA2;nc|ENSG00000148343|Q7L4E1-3|MIGA2;ENSG00000148343|ENST00000684074|MIGA2	ENST00000474534.1_1_9:131798902-131809484:+|nuORF	ENST00000474534.1_1_9:131798902-131809484:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.8930053710938	2	634.893503	1267.77245	1.9684	0.0012497	-3.4658	-0.0022004	-1.4974	-0.00095071	634.8913842364989	105.48	2.7267	105.63	104.93	107.65	0.15583					244	94	5	0	0	0	0.53361	1	12866	12866		49.536	5.1589	1	2461800			55421	4953	36980	36995	62727	62727					0.1492783437104208
SQLRRPLG	8	Unmodified	_SQLRRPLG_					0	0	0			REV__ENST00000397030.5_1_13:113751205-113751547:+|nuORF	REV__ENST00000397030.5_1_13:113751205-113751547:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.7801513671875	2	463.780151	925.545748	0.21343	9.8984E-05	-2.2527	-0.0010448	-2.0393	-0.00094578	463.7789090277637	39.35	0.42563	39.438	39.145	39.57	0.088371					22	11	3	0	0	0	0.84341	1	2398	2398		24.203	1.1603	1	186570	+		55422	26156	36981	36996	62728	62728					0.079997156028071
SQLRVTKVT	9	Unmodified	_SQLRVTKVT_					0	0	0		ENST00000433284.1_1_22:49609931-49610129:-|nuORF	ENST00000433284.1_1_22:49609931-49610129:-|nuORF	ENST00000433284.1_1_22:49609931-49610129:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3126220703125	2	516.314023	1030.61349	0.81893	0.00042282	-0.53598	-0.00027673	0.28295	0.00014609	516.3138808159212	104.47	1.3848	104.59	103.82	105.2	0.11685					111	33	5	0	0	0	0.20789	1	10998	10998		25.574	9.1009	1	1188600			55423	11683	36982	36997	62729	62729					0.09941120742928433
SQLSKIRSL	9	Unmodified	_SQLSKIRSL_					0	0	0			REV__nc|ENSG00000075043|O43526-4|KCNQ2	REV__nc|ENSG00000075043|O43526-4|KCNQ2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3131713867188	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.77244	1	12845	12845		32.812	3.6629	1	4038100	+		55424	16700	36983	36998	62730	62730					0.09941120742928433
SQLVKIDLH	9	Unmodified	_SQLVKIDLH_					0	0	0			REV__ENSG00000143621|ENST00000361891|ILF2	REV__ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.8079833984375	2	526.808574	1051.60259	0.8285	0.00043646	-1.654	-0.00087134	-0.82549	-0.00043488	526.8075886317766	100.77	1.8367	100.92	100.51	102.34	0.14352					113	44	4	0	0	0	0.44421	1	10598	10598		54.776	0	1	2715400	+		55425	19826	36984	36999	62731	62731					0.07885718368675043
SQMPPPLPL	9	Unmodified	_SQMPPPLPL_					0	0	0			REV__ENSG00000184925|ENST00000371633|LCN12	REV__ENSG00000184925|ENST00000371633|LCN12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.26678466796875	2	490.267696	978.520839	0.64647	0.00031694	0.64992	0.00031864	1.2964	0.00063558	490.26800757881944	83.964	3.3049	84.112	83.013	86.318	0.14793					138	76	2	0	0	0	0.78536	1	8334	8334		29.15	0	1	246750	+		55426	22713	36985	37000	62732	62732					0.03071899685221524
SQNRTRSFGHF	11	Unmodified	_SQNRTRSFGHF_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.6360778808594	3	446.221687	1335.64323	0.46966	0.00020957	1.9835	0.00088508	2.4532	0.0010947	446.2230988752149	37.587	0.19088	38.073	37.947	38.138	0.48581					6	4	2	0	0	0	0.17567	1	3057	3057		18.966	9.7545	1	58092			55427	6071	36986	37001	62733	62733					-0.011165472590164427
SQPDTPPGTP	10	Unmodified	_SQPDTPPGTP_					0	0	0		ENSG00000039650|ENST00000322344|PNKP;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF	ENSG00000039650|ENST00000322344|PNKP	ENSG00000039650|ENST00000322344|PNKP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.73663330078125	2	498.735271	995.45599	0.95568	0.00047663	2.3503	0.0011722	3.306	0.0016488	498.73627473351064	20.56	0.34136	20.628	20.438	20.78	0.068251					23	14	2	0	0	0	0.86348	1	492	492		31.53	2.3803	1	34697			55428	926	36987	37002	62734	62734					-0.04192003587081672
SQPVKPKKPW	10	Unmodified	_SQPVKPKKPW_					0	0	0			REV__nc|ENSG00000171490|O76021-2|RSL1D1	REV__nc|ENSG00000171490|O76021-2|RSL1D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8552856445312	2	597.853316	1193.69208	0.93582	0.00055948	3.9067	0.0023357	4.8426	0.0028951	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.86587	1	9164	9164		29.17	0.020503	1	2638300	+		55429	21736	36988	37003	62735	62735					0.10297973048045606
SQQATAVC	8	Unmodified	_SQQATAVC_					0	0	0		nc|ENSG00000183117|Q96PZ7-2|CSMD1;ENSG00000183117|ENST00000635120|CSMD1	nc|ENSG00000183117|Q96PZ7-2|CSMD1	nc|ENSG00000183117|Q96PZ7-2|CSMD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.2327880859375	2	404.186903	806.359253	2.8581	0.0011552	0.7403	0.00029922	3.5984	0.0014544	404.18704950341765	84.702	1.7828	84.761	84.024	85.806	0.059258					70	40	2	0	0	0	0.4196	1	8591	8591		37.159	5.2042	1	101200			55430	7502	36989	37004	62736	62736					-0.05167269347896308
SQQGTPWE	8	Unmodified	_SQQGTPWE_					0	0	0		nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1;ENSG00000138688|ENST00000679879|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7074279785156	2	466.709057	931.40356	-0.47148	-0.00022004	-2.5275	-0.0011796	-2.999	-0.0013997	466.7078154774732	79.659	0.68002	80.075	79.742	80.422	0.41621					26	15	2	0	0	0	0.89043	1	9126	9126		35.618	7.364	1	364670			55431	14953	36990	37005	62737	62737					-0.06488541930048086
SQQIAMAIL	9	Unmodified	_SQQIAMAIL_					0	0	0			REV__ENSG00000248767|ENST00000506382|FOXL3	REV__ENSG00000248767|ENST00000506382|FOXL3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.79058837890625	2	487.770603	973.526652	-0.085709	-4.1806E-05	2.6304	0.001283	2.5447	0.0012412	487.7730195800288	84.129	0.26042	84.196	84.073	84.334	0.067169					6	5	2	0	0	0	0.20789	1	8385	8385		29.15	13.508	1	40548	+		55432	23862	36991	37006	62738	62738					0.03882998196866083
SQQPPPPG	8	Unmodified	_SQQPPPPG_					0	0	0		ENST00000557252.1_1_12:56743718-56743955:-|nuORF	ENST00000557252.1_1_12:56743718-56743955:-|nuORF	ENST00000557252.1_1_12:56743718-56743955:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.5745849609375	2	404.20341	806.392267	-0.18743	-7.5759E-05	-3.0977	-0.0012521	-3.2851	-0.0013278	404.2019902473285	82.496	0.56866	82.562	82.175	82.744	0.065918					14	12	2	0	0	0	0.4196	1	8149	8149		30.504	3.7075	1	30678			55433	13766	36992	37007	62739	62739					-0.018673192335313615
SQRFPLPS	8	Unmodified	_SQRFPLPS_					0	0	0		ENST00000607532.5_1_6:13307806-13327130:-|nuORF;nc|ENSG00000145979|Q9P0N9-4|TBC1D7;ENSG00000145979|ENST00000379300|TBC1D7	ENST00000607532.5_1_6:13307806-13327130:-|nuORF	ENST00000607532.5_1_6:13307806-13327130:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.25311279296875	2	466.253434	930.492316	-0.11946	-5.5699E-05	1.503	0.0007008	1.3836	0.0006451	466.254016420627	63.003	1.4791	62.997	62.043	63.523	-0.0055504					91	67	2	0	0	0	0.82658	1	5868	5868		21.96	1.4781	1	129040			55434	4808	36993	37008	62740	62740					0.024289181002814075
SQRHGVSI	8	Unmodified	_SQRHGVSI_					0	0	0			REV__ENST00000553745.5_1_14:74753379-74769587:-|nuORF	REV__ENST00000553745.5_1_14:74753379-74769587:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2414245605469	2	442.240858	882.467164	-1.4875	-0.00065783	1.6878	0.00074643	0.20036	8.8607E-05	442.24148848241214	79.629	2.7036	79.728	77.569	80.272	0.098701					195	94	3	0	0	0	0.87479	1	7377	7377		30.504	0	1	257300	+		55435	18371	36994	37009	62741	62741					0.02122863297722688
SQRLLLSLLL	10	Unmodified	_SQRLLLSLLL_					0	0	0		nc|ENSG00000251664|Q9UN75-2|PCDHA12;chr5:140984149-141009627|52|12.06|0.0|20.2|+|ENST00000673403|PCDHA12,PCDHAC2;ENSG00000251664|ENST00000398631|PCDHA12	nc|ENSG00000251664|Q9UN75-2|PCDHA12	nc|ENSG00000251664|Q9UN75-2|PCDHA12	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	578.3740844726562	2	578.376623	1154.73869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.708	1	50.684	50.184	51.184	-0.02343								0	0	0	0.45132	1	4405	4405		27.882	2.3082	1				55436	443	36995	37010	62742	62742					0.1675141287933002
SQRLRVLYRIE	11	Unmodified	_SQRLRVLYRIE_					0	0	0		ENSG00000229474|ENST00000682850|PATL2	ENSG00000229474|ENST00000682850|PATL2	ENSG00000229474|ENST00000682850|PATL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.3056945800781	3	478.284287	1431.83103	-0.62814	-0.00030043	0.0049691	2.3767E-06	-0.62318	-0.00029806	478.28444004765925	17.607	0.26825	16.996	16.844	17.112	-0.6107					15	6	3	0	0	0	0.17925	1	280	280		20.315	2.4819	1	77052			55437	8726	36996	37011	62743	62743					0.13238890945535786
SQRRNKGR	8	Unmodified	_SQRRNKGR_					0	0	0			REV__ENST00000489617.5_1_1:205499248-205500503:+|nuORF	REV__ENST00000489617.5_1_1:205499248-205500503:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29046630859375	2	501.289205	1000.56386	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.21	1	89.681	89.181	90.181	0.47068								0	0	0	0.29264	1	10566	10566		29.15	3.5755	1		+		55438	18252	36997	37012	62744	62744					0.06359850577507586
SQSPLMTHPQI	11	Unmodified	_SQSPLMTHPQI_					0	0	0		nc|ENSG00000085276|Q03112-8|MECOM;nc|ENSG00000085276|Q03112-5|MECOM;nc|ENSG00000085276|Q03112-6|MECOM;nc|ENSG00000085276|Q03112-1|MECOM;nc|ENSG00000085276|Q03112-4|MECOM;nc|ENSG00000085276|Q03112|MECOM;ENSG00000085276|ENST00000651503|MECOM	nc|ENSG00000085276|Q03112-8|MECOM	nc|ENSG00000085276|Q03112-8|MECOM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8165893554688	2	619.81353	1237.61251	-0.015388	-9.538E-06	0.031875	1.9757E-05	0.016487	1.0219E-05	619.8138949862217	54.043	0.62709	53.981	53.608	54.235	-0.062065					34	15	4	0	0	0	0.67568	1	4442	4442		32.751	0	1	241170			55439	1528	36998	37013	62745	62745					0.0032053831173470826
SQSSDSGRAAP	11	Unmodified	_SQSSDSGRAAP_					0	0	0			REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.7421875	2	531.744159	1061.47377	-0.59028	-0.00031388	-2.9864	-0.001588	-3.5767	-0.0019019	531.742394862597	41.771	0.82603	41.774	41.461	42.287	0.0034142					40	19	3	0	0	0	0.59499	1	3123	3123		45.022	3.5956	1	539690	+		55440	27558	36999	37014	62746	62746					-0.05451288332233162
SQSWILSVNP	10	Unmodified	_SQSWILSVNP_					0	0	0		nc|ENSG00000136891|Q9NXF1-2|TEX10;ENSG00000136891|ENST00000374902|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	565.795654296875	2	565.795663	1129.57677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.384	1	21.452	20.952	21.952	0.068251								0	0	0	0.45132	1	569	569		29.17	0.020503	1				55441	4153	37000	37015	62747	62747					0.01716824126378924
SQSWKPHY	8	Unmodified	_SQSWKPHY_					0	0	0			REV__ENST00000583334.5_3_17:30666835-30668280:-|nuORF	REV__ENST00000583334.5_3_17:30666835-30668280:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7474365234375	2	516.748516	1031.48248	0.0088494	4.5729E-06	-1.7082	-0.0008827	-1.6993	-0.00087813	516.7476049705497	65.241	0.49527	65.206	64.933	65.428	-0.034798					42	22	2	0	0	0	0.92973	1	6257	6257		50.025	3.2581	1	469650	+		55442	29070	37001	37016	62748	62748					-0.032002699051190575
SQSYCCQTE	9	Unmodified	_SQSYCCQTE_					0	0	0		ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2	ENSG00000024048|ENST00000372901|UBR2	ENSG00000024048|ENST00000372901|UBR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.6884155273438	2	524.689149	1047.36375	0.6354	0.00033339	0.050912	2.6713E-05	0.68631	0.0003601	524.6890176607623	25.671	0.81976	25.717	25.215	26.034	0.045509					50	33	2	0	0	0	0.7932	1	1032	1032		23.042	3.939	1	57929			55443	864	37002	37017	62749	62749					-0.1580417298730481
SQTERDNQAKL	11	Unmodified	_SQTERDNQAKL_					0	0	0			REV__nc|ENSG00000096872|Q96LB3-2|IFT74	REV__nc|ENSG00000096872|Q96LB3-2|IFT74	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	645.3259887695312	2	645.325847	1288.63714	-0.0080801	-5.2143E-06	0.40376	0.00026056	0.39568	0.00025534	645.8277080825007	62.07	0.32075	62.061	61.901	62.222	-0.0094147					14	9	2	0	0	0	0.732	1	5759	5759		26.063	1.5442	1	217470	+		55444	17079	37003	37018	62750	62750					0.004368897187987386
SQTKKKKVE	9	Unmodified	_SQTKKKKVE_					0	0	0			REV__ENST00000247001.9_1_19:19431403-19431535:-|nuORF	REV__ENST00000247001.9_1_19:19431403-19431535:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326904296875	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12509	12509		24.519	1.4767	1	4041000	+		55445	24264	37004	37019	62751	62751					0.10537389914429696
SQTTIGYGVR	10	Unmodified	_SQTTIGYGVR_					0	0	0		ENSG00000157551|ENST00000398938|KCNJ15	ENSG00000157551|ENST00000398938|KCNJ15	ENSG00000157551|ENST00000398938|KCNJ15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.2859497070312	2	541.285463	1080.55637	0.95607	0.00051751	-1.076	-0.00058242	-0.11992	-6.4911E-05	541.2847282396424	20.535	0.58039	20.465	20.183	20.763	-0.070011					63	26	3	0	0	0	0.8545	1	529	529		36.447	0.82846	1	207610			55446	5438	37005	37020	62752	62752					0.019316534665676954
SQTTLTFEL	9	Unmodified	_SQTTLTFEL_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.2694702148438	2	520.268947	1038.52334	-0.2811	-0.00014625	-0.016853	-8.7683E-06	-0.29795	-0.00015501	520.2688275849175	53.739	0.79505	54.324	53.872	54.667	0.58474					42	18	3	0	0	0	0.24527	1	5446	5446		69.628	6.6492	1	1065400	+		55447	21931	37006	37021	62753	62753					0.005620266238793192
SQTTLTFEL	9	Unmodified	_SQTTLTFEL_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	520.268947	1038.52334	0.84711	0.00044072	-0.80082	-0.00041664	0.046285	2.4081E-05	520.2683733158087	53.921	0.54391	54.334	54.036	54.58	0.4139	0.0053537	-0.00037363	NaN	69.628	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1010700	+		55448	21931	37006	37021							0.005620266238793192
SQVLPVLSEM	10	Unmodified	_SQVLPVLSEM_					0	0	0			REV__nc|nan|Q49AR2-2|C5orf22	REV__nc|nan|Q49AR2-2|C5orf22	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7900390625	2	551.794275	1101.574	-0.086775	-4.7882E-05	-2.7229	-0.0015025	-2.8097	-0.0015504	551.7925874942518	73.595	0.40413	74.151	73.962	74.366	0.55584					18	11	2	0	0	0	0.37624	1	8275	8275		42.864	2.2917	1	253940	+		55449	16835	37007	37022	62754	62754					0.02727232677216307
SQVSAQNKEK	10	Unmodified	_SQVSAQNKEK_					0	0	0		nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1;ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1	nc|ENSG00000173230|Q14789-4|GOLGB1	nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.295166015625	2	559.793652	1117.57275	0.45473	0.00025456	-0.77585	-0.00043432	-0.32111	-0.00017976	559.7931839880965	32.135	0.48248	32.129	31.805	32.287	-0.0061455					18	10	2	0	0	0	0.81117	1	1790	1790		38.754	5.9412	1	62188			55450	6843	37008	37023	62755	62755					0.01866734632653788
SQYEKLHTDTK	11	Unmodified	_SQYEKLHTDTK_					0	0	0			REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.9047546386719	3	450.561375	1348.66229	-0.06115	-2.7552E-05	-2.2452	-0.0010116	-2.3063	-0.0010391	450.56026510326825	20.065	0.46291	19.595	19.35	19.813	-0.46967					20	9	3	0	0	0	0.17432	1	568	568		21.032	0	1	37004	+		55451	20831	37009	37024	62756	62756					0.0019094452136414475
SQYLIRLLFL	10	Unmodified	_SQYLIRLLFL_					0	0	0			REV__ENSG00000125484|ENST00000372146|GTF3C4	REV__ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.9268798828125	3	422.592058	1264.75434	-1.8082	-0.00076411	2.8308	0.0011963	1.0226	0.00043216	422.5931690145651	56.763	1.1935	56.835	56.503	57.696	0.071835					118	57	3	0	0	0	0.85285	1	4779	4779		16.717	0	1	582700	+		55452	18646	37010	37025	62757	62757					0.13255699396381715
SQYQNSPL	8	Unmodified	_SQYQNSPL_					0	0	0			REV__ENST00000528662.6_1_11:102584081-102593757:-|nuORF	REV__ENST00000528662.6_1_11:102584081-102593757:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.7225646972656	2	468.724707	935.43486	-1.001	-0.0004692	-2.092	-0.00098057	-3.093	-0.0014498	468.7237111234843	78.023	1.0772	78.15	77.878	78.955	0.12695					84	33	4	0	0	0	0.88601	1	7377	7377		34.173	1.3601	1	786850	+		55453	18293	37011	37026	62758	62758					-0.03543968895951366
SRAAFPLA	8	Unmodified	_SRAAFPLA_					0	0	0		nc|ENSG00000101958|P23416-3|GLRA2;nc|ENSG00000101958|P23416-2|GLRA2;ENSG00000101958|ENST00000218075|GLRA2	nc|ENSG00000101958|P23416-3|GLRA2	nc|ENSG00000101958|P23416-3|GLRA2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	416.22735595703125	2	416.73742	831.460287	1.0992	0.00045807	-3.1323	-0.0013054	-2.0332	-0.00084729	416.73596703132966	40.552	1.3759	40.558	39.728	41.103	0.0065727					42	34	2	0	0	0	0.4196	1	2874	2874		19.36	1.0356	1	76311			55454	1973	37012	37027	62759	62759					0.037815504171248904
SRAAFPLA	8	Unmodified	_SRAAFPLA_					0	0	0		nc|ENSG00000101958|P23416-3|GLRA2;nc|ENSG00000101958|P23416-2|GLRA2;ENSG00000101958|ENST00000218075|GLRA2	nc|ENSG00000101958|P23416-3|GLRA2	nc|ENSG00000101958|P23416-3|GLRA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.22833251953125	2	416.73742	831.460287	0.18609	7.7549E-05	-1.4704	-0.00061275	-1.2843	-0.00053521	416.7365443594886	40.048	0.28485	40.129	39.876	40.161	0.081345					9	6	2	0	0	0	0.4196	1	2506	2506		10.265	0	1	99090			55455	1973	37012	37027	62760	62760					0.037815504171248904
SRAALPAPP	9	Unmodified	_SRAALPAPP_					0	0	0			REV__ENST00000564747.1_1_16:27472673-27473321:-|nuORF	REV__ENST00000564747.1_1_16:27472673-27473321:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2540588378906	2	440.255977	878.497401	-1.0794	-0.00047521	-0.44173	-0.00019447	-1.5211	-0.00066968	440.25573050255707	67.457	0.77168	67.51	67.2	67.972	0.052368					65	27	4	0	0	0	0.7932	1	5998	5998		19.36	1.995	1	460120	+		55456	28844	37013	37028	62761	62761					0.05329221962892916
SRAHFRQIK	9	Unmodified	_SRAHFRQIK_					0	0	0			REV__ENSG00000047634|ENST00000380041|SCML1	REV__ENSG00000047634|ENST00000380041|SCML1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.8320922851562	2	571.830706	1141.64686	-0.97293	-0.00055635	3.5518	0.002031	2.5789	0.0014747	571.8326145712639	76.467	0.58675	76.557	76.254	76.841	0.089363					62	21	4	0	0	0	0.33718	1	7125	7125		62.107	5.3864	1	535810	+		55457	16356	37014	37029	62762	62762					0.08170167305502218
SRALAHGGGL	10	Unmodified	_SRALAHGGGL_					0	0	0		chr10:101064947-101067248|45|12.69|0.09|7.19|+|1|None,KAZALD1|1	chr10:101064947-101067248|45|12.69|0.09|7.19|+|1|None,KAZALD1|1	chr10:101064947-101067248|45|12.69|0.09|7.19|+|1|None,KAZALD1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.757080078125	2	469.761958	937.509363	0.22864	0.00010741	-3.281	-0.0015413	-3.0524	-0.0014339	469.7603126237485	40.263	1.3568	40.345	40.004	41.361	0.081345					62	45	2	0	0	0	0.8608	1	2546	2546		34.173	2.2177	1	459690			55458	60	37015	37030	62763	62763					0.038108387060901805
SRALEVQTP	9	Unmodified	_SRALEVQTP_					0	0	0		ENSG00000172969|ENST00000308062|FRG2C	ENSG00000172969|ENST00000308062|FRG2C	ENSG00000172969|ENST00000308062|FRG2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.7737121582031	2	500.774731	999.534909	-0.57961	-0.00029025	0.52797	0.0002644	-0.051635	-2.5858E-05	500.77496345049894	50.6	0.57563	50.629	50.343	50.919	0.029629					31	17	2	0	0	0	0.44421	1	3963	3963		54.776	7.119	1	273720			55459	6811	37016	37031	62764	62764					0.03512268437862076
SRALGVAKLF	10	Unmodified	_SRALGVAKLF_					0	0	0		ENSG00000185156|ENST00000329805|MFSD6L	ENSG00000185156|ENST00000329805|MFSD6L	ENSG00000185156|ENST00000329805|MFSD6L	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3280639648438	2	531.326934	1060.63931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.04	1	105.2	104.7	105.7	0.15583								0	0	0	0.45132	1	12795	12795		24.519	2.5593	1				55460	7684	37017	37032	62765	62765					0.1114201498521652
SRALIVHIKRG	11	Unmodified	_SRALIVHIKRG_					0	0	0			REV__ENST00000417982.6_1_17:53851072-53853458:+|nuORF	REV__ENST00000417982.6_1_17:53851072-53853458:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2555847167969	3	417.266568	1248.77787	0.46342	0.00019337	2.4249	0.0010118	2.8883	0.0012052	417.6019370096819	21.665	0.095926	21.648	21.606	21.702	-0.016428					7	4	2	0	0	0	0.17705	1	602	602		20.315	0.28454	1	18789	+		55461	19665	37018	37033	62766	62766					0.1634355795351894
SRALPQLPL	9	Unmodified	_SRALPQLPL_					0	0	0			REV__ENSG00000116198|ENST00000378230|CEP104	REV__ENSG00000116198|ENST00000378230|CEP104	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.8042907714844	2	497.805834	993.597115	0.0055492	2.7624E-06	-1.9188	-0.00095521	-1.9133	-0.00095244	497.80479582791173	66.777	1.0579	67.162	66.85	67.908	0.38515					52	30	2	0	0	0	0.76255	1	7346	7346		35.618	0	1	235310	+		55462	18188	37019	37034	62767	62767					0.10006039576853709
SRALSRPSA	9	Unmodified	_SRALSRPSA_					0	0	0		ENST00000254657.7_1_2:239161823-239162174:-|nuORF	ENST00000254657.7_1_2:239161823-239162174:-|nuORF	ENST00000254657.7_1_2:239161823-239162174:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.76763916015625	2	472.76724	943.519927	-1.1355	-0.00053681	1.1341	0.00053614	-0.0014011	-6.6241E-07	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.78983	1	7758	7758		27.882	3.6795	1	292450			55463	9322	37020	37035	62768	62768					0.045908213605116543
SRALSRPSA	9	Unmodified	_SRALSRPSA_					0	0	0		ENST00000254657.7_1_2:239161823-239162174:-|nuORF	ENST00000254657.7_1_2:239161823-239162174:-|nuORF	ENST00000254657.7_1_2:239161823-239162174:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7656555175781	2	472.76724	943.519927	0.45435	0.0002148	-0.78739	-0.00037225	-0.33305	-0.00015745	472.7668500235695	81.593	2.4119	81.53	80.267	82.679	-0.062935					139	57	4	0	0	0	0.76255	1	8169	8169		35.618	2.8059	1	232880			55464	9322	37020	37035	62769	62769					0.045908213605116543
SRAMILTF	8	Unmodified	_SRAMILTF_					0	0	0		chr5:70041631-70938839|30|14.2|0.05|8.15|+|1|SERF1B,SMN1|1	chr5:70041631-70938839|30|14.2|0.05|8.15|+|1|SERF1B,SMN1|1	chr5:70041631-70938839|30|14.2|0.05|8.15|+|1|SERF1B,SMN1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.76031494140625	2	469.760038	937.505523	-1.0554	-0.00049577	2.1593	0.0010144	1.1039	0.00051859	469.7608617085479	40.328	1.2889	40.334	40.071	41.36	0.0065002					73	45	3	0	0	0	0.89962	1	2539	2539		38.806	6.8513	1	435990			55465	457	37021	37036	62770	62770					0.03427032888021131
SRAPGQPAGG	10	Unmodified	_SRAPGQPAGG_					0	0	0		ENST00000413848.1_1_2:201827991-201873805:+|nuORF	ENST00000413848.1_1_2:201827991-201873805:+|nuORF	ENST00000413848.1_1_2:201827991-201873805:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.23187255859375	2	449.230491	896.446428	-1.2863	-0.00057784	1.5021	0.0006748	0.21583	9.6958E-05	449.2311264032564	83.242	4.4752	83.407	81.466	85.941	0.1651					199	104	3	0	0	0	0.86348	1	8048	8048		31.53	4.7337	1	231800			55466	11355	37022	37037	62771	62771					-0.0059372708195724044
SRAPKLPLRTL	11	Unmodified	_SRAPKLPLRTL_					0	0	0		ENST00000314641.9_1_6:105581396-105585043:-|nuORF	ENST00000314641.9_1_6:105581396-105585043:-|nuORF	ENST00000314641.9_1_6:105581396-105585043:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.92242431640625	3	417.934706	1250.78229	2.717	0.0011355	1.7281	0.00072223	4.4451	0.0018578	417.93528629567083	105.96	0.47922	105.93	105.66	106.14	-0.037148					20	11	2	0	0	0	0.17385	1	11698	11698		12.433	0	1	144430			55467	9964	37023	37038	62772	62772					0.16693022376466615
SRAQEHYPV	9	Unmodified	_SRAQEHYPV_					0	0	0		ENSG00000175445|ENST00000650287|LPL	ENSG00000175445|ENST00000650287|LPL	ENSG00000175445|ENST00000650287|LPL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.7047729492188	2	543.76998	1085.52541	0.43079	0.00023425	-1.8712	-0.0010175	-1.4404	-0.00078327	543.7686997811427	31.686	0.37891	31.68	31.521	31.9	-0.0061455					14	8	2	0	0	0	0.20789	1	1745	1745		49.442	20.292	1	28374			55468	7016	37024	37039	62773	62773					-0.013934998476770488
SRAQPHPSK	9	Unmodified	_SRAQPHPSK_					0	0	0		ENST00000443669.5_1_22:32341536-32341614:+|nuORF;ENST00000479649.1_1_22:32340737-32341614:+|nuORF	ENST00000443669.5_1_22:32341536-32341614:+|nuORF	ENST00000443669.5_1_22:32341536-32341614:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.26019287109375	2	504.27269	1006.53083	0.82054	0.00041378	1.2132	0.00061177	2.0337	0.0010255	504.27300115170766	48.824	0.4812	49.728	49.489	49.971	0.90424					25	11	3	0	0	0	0.20789	1	4778	4778		40.058	7.2458	1	318390			55469	11806	37025	37040	62774	62774					0.02782223734800482
SRAQPHPSK	9	Unmodified	_SRAQPHPSK_					0	0	0		ENST00000443669.5_1_22:32341536-32341614:+|nuORF;ENST00000479649.1_1_22:32340737-32341614:+|nuORF	ENST00000443669.5_1_22:32341536-32341614:+|nuORF	ENST00000443669.5_1_22:32341536-32341614:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	504.27269	1006.53083	-0.72662	-0.00036641	2.4983	0.0012598	1.7716	0.00089339	504.27377098245756	48.996	0.44419	49.456	49.262	49.707	0.45983	-0.13645	0.00044204	NaN	32.751	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	399850			55470	11806	37025	37040							0.02782223734800482
SRARKRRLR	9	Unmodified	_SRARKRRLR_					0	0	0			REV__nc|ENSG00000159147|Q9NYP3-2|DONSON	REV__nc|ENSG00000159147|Q9NYP3-2|DONSON	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.261962890625	3	400.262039	1197.76429	0.45641	0.00018268	-0.33265	-0.00013315	0.12377	4.9539E-05	400.26178778301187	15.568	0.20124	15.544	15.45	15.651	-0.024207					7	5	2	0	0	0	0.7932	1	51	51		24.519	0	1	111720	+		55471	20640	37026	37041	62775	62775					0.17331744964963036
SRARKRRLR	9	Unmodified	_SRARKRRLR_					0	0	0			REV__nc|ENSG00000159147|Q9NYP3-2|DONSON	REV__nc|ENSG00000159147|Q9NYP3-2|DONSON	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	400.262039	1197.76429	0.45641	0.00018268	-0.33265	-0.00013315	0.12377	4.9539E-05	400.26178778301187	15.568	0.20124	15.544	15.45	15.651	-0.024207	0.020905	-0.0009751	NaN	24.519	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111720	+		55472	20640	37026	37041							0.17331744964963036
SRARLSLPKQL	11	Unmodified	_SRARLSLPKQL_					0	0	0		ENSG00000110851|ENST00000228437|PRDM4	ENSG00000110851|ENST00000228437|PRDM4	ENSG00000110851|ENST00000228437|PRDM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8927001953125	2	634.893503	1267.77245	0.93451	0.00059331	-2.8314	-0.0017976	-1.8969	-0.0012043	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.51007	1	11201	11201		51.193	3.5354	1	69492000			55473	2545	37027	37042	62776	62776					0.14927834371087556
SRARLSLPKQL	11	Unmodified	_SRARLSLPKQL_					0	0	0		ENSG00000110851|ENST00000228437|PRDM4	ENSG00000110851|ENST00000228437|PRDM4	ENSG00000110851|ENST00000228437|PRDM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8927001953125	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.55601	1	11139	11139		47.96	5.5634	1	66671000			55474	2545	37027	37042	62777	62777					0.14927834371087556
SRARVALHVP	10	Unmodified	_SRARVALHVP_					0	0	0			REV__nc|ENSG00000077150|Q00653-4|NFKB2	REV__nc|ENSG00000077150|Q00653-4|NFKB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3289184570312	2	553.333082	1104.65161	1.2853	0.00071117	-2.555	-0.0014138	-1.2698	-0.00070261	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.85251	1	10465	10465		19.997	0.89325	1	4524400	+		55475	16736	37028	37043	62778	62778					0.10347051448275124
SRASIKPSP	9	Unmodified	_SRASIKPSP_					0	0	0			REV__ENST00000433058.1_1_1:225636110-225652972:-|nuORF	REV__ENST00000433058.1_1_1:225636110-225652972:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7908020019531	2	471.771991	941.529429	0.22913	0.0001081	0.1031	4.8638E-05	0.33222	0.00015673	471.7717427282836	28.46	0.57821	28.286	27.89	28.468	-0.17336					20	14	2	0	0	0	0.20789	1	1724	1724		51.193	15.574	1	81364	+		55476	26642	37029	37044	62779	62779					0.05632589646040742
SRASIVAKH	9	Unmodified	_SRASIVAKH_					0	0	0			REV__ENSG00000011114|ENST00000334746|BTBD7	REV__ENSG00000011114|ENST00000334746|BTBD7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.2862243652344	2	484.785433	967.556313	-1.1421	-0.00055367	1.9636	0.00095194	0.82152	0.00039826	484.78789018167805	41.476	1.8948	41.435	40.856	42.751	-0.04081					148	48	4	0	0	0	0.6204	1	3159	3159		45.972	1.4412	1	1666200	+		55477	16177	37030	37045	62780	62780					0.07123698257225897
SRASPPLRG	9	Unmodified	_SRASPPLRG_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.76904296875	2	470.769783	939.525013	-0.5306	-0.00024979	-0.82903	-0.00039028	-1.3596	-0.00064007	470.76924692266675	54.862	1.6397	54.812	54.113	55.753	-0.049274					122	51	3	0	0	0	0.51592	1	4589	4589		51.193	1.7511	1	2604200	+		55478	17608	37031	37046	62781	62781					0.052831252231385406
SRASPPLRG	9	Unmodified	_SRASPPLRG_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7691345214844	2	470.769783	939.525013	-0.65478	-0.00030825	-0.88303	-0.00041571	-1.5378	-0.00072396	470.7692226833795	80.078	1.5697	80.605	79.423	80.992	0.52676					81	36	3	0	0	0	0.76419	1	9194	9194		35.152	2.3396	1	1102700	+		55479	17608	37031	37046	62782	62782					0.052831252231385406
SRATEAGLPD	10	Unmodified	_SRATEAGLPD_					0	0	0		ENST00000461444.5_1_17:53046090-53062984:+|nuORF	ENST00000461444.5_1_17:53046090-53062984:+|nuORF	ENST00000461444.5_1_17:53046090-53062984:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.75628662109375	2	508.753995	1015.49344	0.50051	0.00025464	3.8374	0.0019523	4.3379	0.0022069	508.75579424873774	69.849	0.77033	70.395	70.072	70.843	0.54693					35	20	2	0	0	0	0.81117	1	7746	7746		38.754	1.5945	1	509660			55480	12022	37032	37047	62783	62783					-0.0136891232148173
SRATLRVP	8	Unmodified	_SRATLRVP_					0	0	0			REV__ENST00000284486.8_1_8:11302061-11302304:-|nuORF	REV__ENST00000284486.8_1_8:11302061-11302304:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.274658203125	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.87064	1	9455	9455		29.15	3.6994	1	26247000	+		55481	24627	37033	37048	62784	62784					0.08152313228515595
SRAVPLLLRGK	11	Unmodified	_SRAVPLLLRGK_					0	0	0			REV__ENST00000570069.5_1_16:1828418-1828808:+|nuORF	REV__ENST00000570069.5_1_16:1828418-1828808:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.92938232421875	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.541	1	48.448	47.948	48.948	-0.093178								0	0	0	0.56276	1	3703	3703		9.7451	0.94577	1		+		55482	28919	37034	37049	62785	62785					0.1756903972204782
SRCCCSKNKG	10	Unmodified	_SRCCCSKNKG_					0	0	0		ENST00000561400.1_1_15:64067831-64126137:-|nuORF	ENST00000561400.1_1_15:64067831-64126137:-|nuORF	ENST00000561400.1_1_15:64067831-64126137:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.2346801757812	2	543.236078	1084.4576	-0.34567	-0.00018778	-0.7216	-0.000392	-1.0673	-0.00057978	543.2354614629653	43.06	0.73464	43.06	42.766	43.5	0.00016785					36	16	3	0	0	0	0.23224	1	3286	3286		80.455	0.51539	1	282620			55483	13834	37035	37050	62786	62786					-0.08124732365990894
SRCCCSKNKG	10	Unmodified	_SRCCCSKNKG_					0	0	0		ENST00000561400.1_1_15:64067831-64126137:-|nuORF	ENST00000561400.1_1_15:64067831-64126137:-|nuORF	ENST00000561400.1_1_15:64067831-64126137:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	543.236078	1084.4576	0.10024	5.4453E-05	-1.3368	-0.0007262	-1.2366	-0.00067174	543.2351452091217	43.061	0.84738	43.031	42.675	43.522	-0.029461	-0.023115	-0.00035844	NaN	80.455	36	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	282850			55484	13834	37035	37050							-0.08124732365990894
SRCKLAVV	8	Unmodified	_SRCKLAVV_					0	0	0			REV__ENST00000528633.1_3_11:77103583-77122904:-|nuORF	REV__ENST00000528633.1_3_11:77103583-77122904:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26556396484375	2	438.260205	874.505857	-1.6073	-0.00070441	3.6175	0.0015854	2.0102	0.00088098	438.2626942090824	24.022	0.21501	24.08	23.889	24.104	0.058165					10	8	2	0	0	0	0.4196	1	801	801		24.203	4.8428	1	46270	+		55485	28247	37036	37051	62787	62787					0.06358452607878462
SRCLLLLPLLL	11	Unmodified	_SRCLLLLPLLL_					0	0	0		ENSG00000137161|ENST00000372836|CNPY3;nc|ENSG00000137161|Q9BT09-2|CNPY3	ENSG00000137161|ENST00000372836|CNPY3	ENSG00000137161|ENST00000372836|CNPY3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.26446533203125	3	418.60531	1252.7941	-0.80519	-0.00033706	-0.4124	-0.00017263	-1.2176	-0.00050969	418.93952643387223	48.929	2.0864	48.904	47.856	49.942	-0.025105					77	48	2	0	0	0	0.17289	1	4144	4144		21.78	0	1	118610			55486	4175	37037	37052	62788	62788					0.17781503075457294
SRCPCLGVAVY	11	Unmodified	_SRCPCLGVAVY_					0	0	0		ENST00000416970.5_1_9:139619277-139620805:-|nuORF	ENST00000416970.5_1_9:139619277-139620805:-|nuORF	ENST00000416970.5_1_9:139619277-139620805:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.2864990234375	2	584.286094	1166.55763	-0.35757	-0.00020893	3.6691	0.0021438	3.3116	0.0019349	584.2883048001765	79.267	0.68226	79.816	79.531	80.213	0.54945					39	15	4	0	0	0	0.48529	1	9122	9122		52.937	5.2794	1	676470			55487	11406	37038	37053	62789	62789					-0.018981717605129234
SRCSGILPV	9	Unmodified	_SRCSGILPV_					0	0	0		chr6:113939246-113941708|56|11.23|0.67|4.08|-|2|None,HDAC2|1	chr6:113939246-113941708|56|11.23|0.67|4.08|-|2|None,HDAC2|1	chr6:113939246-113941708|56|11.23|0.67|4.08|-|2|None,HDAC2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.25518798828125	2	466.25512	930.495686	0.14963	6.9764E-05	-3.1762	-0.0014809	-3.0265	-0.0014111	466.2534991696802	60.959	1.2686	60.926	59.804	61.072	-0.032509					71	38	2	0	0	0	0.78983	1	5775	5775		27.882	1.1893	1	239520			55488	464	37039	37054	62790	62790					0.027658448826286985
SRCTLVDTWW	10	Unmodified	_SRCTLVDTWW_					0	0	0		nc|ENSG00000154930|Q9NUB1-3|ACSS1;nc|ENSG00000154930|Q9NUB1-4|ACSS1;nc|ENSG00000154930|Q9NUB1-2|ACSS1;ENSG00000154930|ENST00000323482|ACSS1	nc|ENSG00000154930|Q9NUB1-3|ACSS1	nc|ENSG00000154930|Q9NUB1-3|ACSS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	632.8424682617188	2	633.800423	1265.58629	1.0161	0.00064402	-1.3911	-0.00088168	-0.37498	-0.00023766	633.7992851902814	77.16	0.55867	77.728	77.453	78.012	0.56836					25	12	3	0	0	0	0.37624	1	8834	8834		24.519	0	1	373250			55489	5305	37040	37055	62791	62791					-0.03587730859749172
SRDCYDCF	8	Unmodified	_SRDCYDCF_					0	0	0			REV__ENST00000489010.1_1_22:30144317-30144539:-|nuORF	REV__ENST00000489010.1_1_22:30144317-30144539:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.68310546875	2	504.681127	1007.3477	1.1715	0.00059125	2.6931	0.0013591	3.8646	0.0019504	504.6823119216223	96.123	0.75139	96.544	96.234	96.985	0.4205					45	17	3	0	0	0	0.884	1	11533	11533		33.516	6.7195	1	1414700	+		55490	17168	37041	37056	62792	62792					-0.15567834433534244
SRDDHVYWTD	10	Unmodified	_SRDDHVYWTD_					0	0	0		ENSG00000134569|ENST00000378623|LRP4	ENSG00000134569|ENST00000378623|LRP4	ENSG00000134569|ENST00000378623|LRP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	647.28076171875	2	647.278366	1292.54218	1.5694	0.0010158	1.6281	0.0010539	3.1975	0.0020697	647.2794672984256	58.664	1.0563	59.217	58.718	59.775	0.55323					72	25	4	0	0	0	0.8545	1	6172	6172		36.447	6.896	1	2912600			55491	3944	37042	37057	62793	62793					-0.09239043752404541
SRDETRQRVK	10	Unmodified	_SRDETRQRVK_					0	0	0		ENST00000418978.5_1_16:258158-278359:-|nuORF	ENST00000418978.5_1_16:258158-278359:-|nuORF	ENST00000418978.5_1_16:258158-278359:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.77496337890625	3	425.568975	1273.6851	0.21372	9.0953E-05	0.70662	0.00030071	0.92034	0.00039167	425.56930211208453	37.891	0.36988	38.204	37.98	38.35	0.31312					12	9	2	0	0	0	0.37624	1	3061	3061		12.957	0	1	77002			55492	11434	37043	37058	62794	62794					0.059200084295071065
SREAPLVQ	8	Unmodified	_SREAPLVQ_					0	0	0			REV__nc|ENSG00000182329|Q0VF49|KIAA2012	REV__nc|ENSG00000182329|Q0VF49|KIAA2012	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.25115966796875	2	450.250892	898.48723	0.38762	0.00017452	-0.21944	-9.8803E-05	0.16818	7.5721E-05	450.25063616936995	31.332	0.77067	31.335	30.971	31.742	0.0037212					45	17	5	0	0	0	0.79403	1	2145	2145		63.306	0	1	1483200	+		55493	22518	37044	37059	62795	62795					0.033926142376685675
SREARPAAPL	10	Unmodified	_SREARPAAPL_					0	0	0			REV__ENST00000536690.1_1_11:64064895-64067293:+|nuORF	REV__ENST00000536690.1_1_11:64064895-64067293:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.3025512695312	2	534.301447	1066.58834	0.42514	0.00022715	2.1884	0.0011692	2.6135	0.0013964	534.3025191380611	76.926	0.59132	77.326	76.993	77.584	0.3997					34	20	2	0	0	0	0.67571	1	8760	8760		45.972	4.5456	1	403920	+		55494	28413	37045	37060	62796	62796					0.05771065940348308
SREEAAYMVDM	11	Unmodified	_SREEAAYMVDM_					0	0	0		ENSG00000173137|ENST00000308860|ADCK5;ENST00000529654.5_1_8:145616841-145618286:+|nuORF	ENSG00000173137|ENST00000308860|ADCK5	ENSG00000173137|ENST00000308860|ADCK5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78076171875	3	434.521534	1300.54277	1.7361	0.00075435	-0.1469	-6.3832E-05	1.5892	0.00069052	434.52137742402715	35.792	0.49207	36.232	35.959	36.451	0.44043					22	12	3	0	0	0	0.17302	1	2757	2757		15.921	1.227	1	186740			55495	6831	37046	37061	62797	62797					-0.09547708419222545
SREERSSFIKV	11	Unmodified	_SREERSSFIKV_					0	0	0			REV__nc|ENSG00000106799|P36897-3|TGFBR1;REV__nc|ENSG00000135503|P36896-3|ACVR1B	REV__nc|ENSG00000106799|P36897-3|TGFBR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	446.25701904296875	3	446.577247	1336.70991	-0.42429	-0.00018948	0.041968	1.8742E-05	-0.38233	-0.00017074	446.5771572776121	37.634	0.50645	37.947	37.621	38.127	0.31312					19	12	2	0	0	0	0.17368	1	3020	3020		28.577	0	1	215460	+		55496	17630;29864	37047	37062	62798	62798					0.05502643512227223
SREKLLVTPNI	11	Unmodified	_SREKLLVTPNI_					0	0	0			REV__ENSG00000073756|ENST00000367468|PTGS2	REV__ENSG00000073756|ENST00000367468|PTGS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.3066711425781	3	423.922355	1268.74524	2.518	0.0010674	-2.7095	-0.0011486	-0.19148	-8.1173E-05	423.9223710396086	26.1	0.61586	25.668	25.525	26.141	-0.4311					20	13	2	0	0	0	0.17193	1	1476	1476		33.542	0	1	121230	+		55497	16681	37048	37063	62799	62799					0.12161306040070485
SRELAINNSVF	11	Unmodified	_SRELAINNSVF_					0	0	0			REV__nc|ENSG00000174473|Q49A17-2|GALNTL6	REV__nc|ENSG00000174473|Q49A17-2|GALNTL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2252502441406	3	417.222693	1248.64625	1.0763	0.00044904	4.0115	0.0016737	5.0877	0.0021227	417.22436050371107	54.308	0.62957	54.714	54.446	55.075	0.40663					42	14	4	0	0	0	0.69687	1	5552	5552		32.034	3.9526	1	1605600	+		55498	21996	37049	37064	62800	62800					0.03187283075135383
SRELAINNSVF	11	Unmodified	_SRELAINNSVF_					0	0	0			REV__nc|ENSG00000174473|Q49A17-2|GALNTL6	REV__nc|ENSG00000174473|Q49A17-2|GALNTL6	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	417.222693	1248.64625	1.0763	0.00044904	4.0115	0.0016737	5.0877	0.0021227	417.22436050371107	54.308	0.62957	54.714	54.446	55.075	0.40663	0.051282	-0.00083849	NaN	32.034	42	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1605600	+		55499	21996	37049	37064							0.03187283075135383
SRELAINNSVF	11	Unmodified	_SRELAINNSVF_					0	0	0			REV__nc|ENSG00000174473|Q49A17-2|GALNTL6	REV__nc|ENSG00000174473|Q49A17-2|GALNTL6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	417.222693	1248.64625	-0.32521	-0.00013569	5.5576	0.0023187	5.2324	0.0021831	417.2251392531356	54.027	0.75221	54.612	54.333	55.085	0.58474	-0.051282	0.0010967	NaN	32.034	40	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1613600	+		55500	21996	37049	37064							0.03187283075135383
SRELRRLP	8	Unmodified	_SRELRRLP_					0	0	0			REV__ENST00000605275.1_1_9:34646808-34647045:+|nuORF	REV__ENST00000605275.1_1_9:34646808-34647045:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8088989257812	2	513.811982	1025.60941	-1.3833	-0.00071076	-4.3654	-0.002243	-5.7487	-0.0029537	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.88185	1	4397	4397		32.812	0	1	1148600	+		55501	29359	37050	37065	62801	62801					0.09763076039894258
SREQDNIQ	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SREQDNIQ_					1	0	0			REV__ENST00000475754.5_2_3:168851253-168864300:-|nuORF	REV__ENST00000475754.5_2_3:168851253-168864300:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2421875	2	516.241252	1030.46795	2.7609	0.0014253	-2.708	-0.001398	0.052889	2.7304E-05	516.2397031655148	25.67	0.4994	25.239	24.983	25.482	-0.4311					18	11	2	0	0	0	0.94135	1	1354	1354		54.776	6.8607	1	121990	+		55502	27323	37051	37066	62802	62802					-0.04606386843875043
SREQDNIQ	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SREQDNIQ_					1	0	0			REV__ENST00000475754.5_2_3:168851253-168864300:-|nuORF	REV__ENST00000475754.5_2_3:168851253-168864300:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	516.241252	1030.46795	0.61901	0.00031956	-0.62535	-0.00032283	-0.0063463	-3.2762E-06	516.2408938340768	25.651	0.55029	25.393	25.132	25.682	-0.2572	0.07713	0.00071418	NaN	54.776	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150320	+		55503	27323	37051	37066							-0.04606386843875043
SREQDNIQ	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SREQDNIQ_					1	0	0			REV__ENST00000475754.5_2_3:168851253-168864300:-|nuORF	REV__ENST00000475754.5_2_3:168851253-168864300:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	516.241252	1030.46795	2.7609	0.0014253	-2.708	-0.001398	0.052889	2.7304E-05	516.2397031655148	25.67	0.4994	25.239	24.983	25.482	-0.4311	-0.07713	-0.0014361	NaN	54.776	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121990	+		55504	27323	37051	37066							-0.04606386843875043
SREQKNAL	8	Unmodified	_SREQKNAL_					0	0	0			REV__ENSG00000118193|ENST00000367350|KIF14	REV__ENSG00000118193|ENST00000367350|KIF14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2544250488281	2	473.259248	944.503943	0.8453	0.00040005	3.6006	0.001704	4.4459	0.0021041	473.2608205588439	22.458	0.48858	22.039	21.833	22.321	-0.41879					17	10	2	0	0	0	0.4196	1	918	918		12.207	5.0135	1	56094	+		55505	18294	37052	37067	62803	62803					0.02947115123618005
SRFFFSTP	8	Unmodified	_SRFFFSTP_					0	0	0		ENST00000489964.5_1_2:136664888-136672125:-|nuORF	ENST00000489964.5_1_2:136664888-136672125:-|nuORF	ENST00000489964.5_1_2:136664888-136672125:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	495.2906494140625	2	494.747985	987.481417	-0.9481	-0.00046907	3.6752	0.0018183	2.7271	0.0013492	494.7486377088519	68.746	0.58449	68.812	68.468	69.053	0.065506					43	24	2	0	0	0	0.4196	1	6191	6191		20.947	4.4738	1	63565			55506	12661	37053	37068	62804	62804					-0.012824842739860287
SRFILHIP	8	Unmodified	_SRFILHIP_					0	0	0		nc|ENSG00000172795|Q8IU60-2|DCP2;ENSG00000172795|ENST00000389063|DCP2	nc|ENSG00000172795|Q8IU60-2|DCP2	nc|ENSG00000172795|Q8IU60-2|DCP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.795654296875	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.87064	1	4586	4586		29.15	3.6994	1	781720			55507	6795	37054	37069	62805	62805					0.08446074267999393
SRFKFIGK	8	Unmodified	_SRFKFIGK_					0	0	0		ENST00000517678.5_1_8:125551227-125551287:-|nuORF	ENST00000517678.5_1_8:125551227-125551287:-|nuORF	ENST00000517678.5_1_8:125551227-125551287:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79656982421875	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.8621	1	4144	4144		26.693	4.733	1	581270			55508	13104	37055	37070	62806	62806					0.08446074267999393
SRFKFIGK	8	Unmodified	_SRFKFIGK_					0	0	0		ENST00000517678.5_1_8:125551227-125551287:-|nuORF	ENST00000517678.5_1_8:125551227-125551287:-|nuORF	ENST00000517678.5_1_8:125551227-125551287:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7953796386719	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.81897	1	3954	3954		20.947	1.587	1	1502200			55509	13104	37055	37070	62807	62807					0.08446074267999393
SRFKFIGK	8	Unmodified	_SRFKFIGK_					0	0	0		ENST00000517678.5_1_8:125551227-125551287:-|nuORF	ENST00000517678.5_1_8:125551227-125551287:-|nuORF	ENST00000517678.5_1_8:125551227-125551287:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7956237792969	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.763	1	59.764	59.264	60.264	0.00051117								0	0	0	0.29978	1	5147	5147		21.96	2.5999	1				55510	13104	37055	37070	62808	62808					0.08446074267999393
SRFLCVTE	8	Unmodified	_SRFLCVTE_					0	0	0		ENST00000526104.5_2_11:207946-208069:+|nuORF	ENST00000526104.5_2_11:207946-208069:+|nuORF	ENST00000526104.5_2_11:207946-208069:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	477.2276306152344	2	477.739302	953.464052	-0.88622	-0.00042338	-1.2249	-0.00058518	-2.1111	-0.0010086	477.73896113131485	68.895	0.33121	69.03	68.804	69.135	0.13521					21	14	2	0	0	0	0.4196	1	6221	6221		10.866	0	1	49142			55511	13251	37056	37071	62809	62809					-0.014541478713226752
SRFLGKMD	8	Unmodified	_SRFLGKMD_					0	0	0		ENSG00000169258|ENST00000303991|GPRIN1;nc|ENSG00000169258|Q7Z2K8-2|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	477.2519226074219	2	477.247295	952.480036	-0.65917	-0.00031459	-1.2403	-0.00059194	-1.8995	-0.00090653	477.2465366365226	69.03	1.2553	68.993	68.164	69.42	-0.036957					77	49	2	0	0	0	0.884	1	6700	6700		33.516	6.7195	1	133140			55512	6483	37057	37072	62810	62810					0.0018955836559371164
SRFLQSLEEIV	11	Unmodified	_SRFLQSLEEIV_					0	0	0			REV__nc|ENSG00000135119|Q96EX2-3|RNFT2	REV__nc|ENSG00000135119|Q96EX2-3|RNFT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.6276550292969	3	440.910115	1319.70852	0.58087	0.00025611	-2.3512	-0.0010367	-1.7703	-0.00078056	440.9088569625531	15.362	0.20113	15.337	15.248	15.45	-0.024207					10	6	2	0	0	0	0.17521	1	30	30		28.577	0	1	200970	+		55513	19194	37058	37073	62811	62811					0.061450094234714925
SRFPEELIG	9	Unmodified	_SRFPEELIG_					0	0	0			REV__ENSG00000123454|ENST00000393056|DBH	REV__ENSG00000123454|ENST00000393056|DBH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.276611328125	2	524.277106	1046.53966	0.77594	0.00040681	-1.2066	-0.0006326	-0.43068	-0.00022579	524.2765116769002	25.659	3.3591	25.402	24.41	27.769	-0.25721					213	75	6	0	0	0	0.69624	1	1410	1410		40.778	0	1	20447000	+		55514	18544	37059	37074	62812	62812					0.01825152580613576
SRFPEELIG	9	Unmodified	_SRFPEELIG_					0	0	0			REV__ENSG00000123454|ENST00000393056|DBH	REV__ENSG00000123454|ENST00000393056|DBH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2765502929688	2	524.277106	1046.53966	2.7827	0.0014589	-3.2687	-0.0017137	-0.48603	-0.00025482	524.2754281662812	25.682	3.5829	25.251	24.138	27.721	-0.4311					230	81	7	0	0	0	0.67345	1	1447	1447		42.396	6.7778	1	23207000	+		55515	18544	37059	37074	62813	62813					0.01825152580613576
SRFRGGAAPP	10	Unmodified	_SRFRGGAAPP_					0	0	0			REV__ENST00000517910.1_1_8:103819069-103819480:+|nuORF	REV__ENST00000517910.1_1_8:103819069-103819480:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.78192138671875	2	508.275232	1014.53591	-0.35402	-0.00017994	-1.2742	-0.00064765	-1.6282	-0.00082759	508.27456407429634	31.882	0.59818	32.008	31.691	32.289	0.12642					27	13	3	0	0	0	0.37624	1	2147	2147		30.318	2.2362	1	153330	+		55516	28056	37060	37075	62814	62814					0.02922527597422686
SRGAGLAAP	9	Unmodified	_SRGAGLAAP_					0	0	0			REV__ENST00000394790.2_1_10:75532144-75533060:+|nuORF	REV__ENST00000394790.2_1_10:75532144-75533060:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2266540527344	2	400.224677	798.434801	1.8836	0.00075385	2.9405	0.0011769	4.8241	0.0019307	400.22567128573456	34.872	1.5031	35.082	34.854	36.357	0.21003					89	38	3	0	0	0	0.78536	1	2698	2698		29.15	0	1	1257500	+		55517	26090	37061	37076	62815	62815					0.027520758947048307
SRGAQQVALL	10	Unmodified	_SRGAQQVALL_					0	0	0		ENST00000479659.5_1_1:1561777-1565907:+|nuORF	ENST00000479659.5_1_1:1561777-1565907:+|nuORF	ENST00000479659.5_1_1:1561777-1565907:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.8062744140625	2	521.803823	1041.59309	-0.11311	-5.9022E-05	4.3887	0.00229	4.2756	0.002231	521.8059245005005	44.852	1.3013	45.315	44.578	45.88	0.46313					77	31	3	0	0	0	0.51302	1	4151	4151		54.776	3.4409	1	1090800			55518	12414	37062	37077	62816	62816					0.07395950083150638
SRGCVARH	8	Unmodified	_SRGCVARH_					0	0	0			REV__ENSG00000114650|ENST00000265565|SCAP;REV__nc|ENSG00000114650|Q12770-2|SCAP	REV__ENSG00000114650|ENST00000265565|SCAP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2312927246094	2	443.227228	884.439903	-0.4803	-0.00021288	-0.34867	-0.00015454	-0.82897	-0.00036742	443.2270221472499	45.381	0.64256	46.276	46.005	46.647	0.89542					28	15	3	0	0	0	0.4196	1	4259	4259		24.203	0	1	454970	+		55519	18058;29792	37063	37078	62817	62817					-0.006939435143294759
SRGEDFSL	8	Unmodified	_SRGEDFSL_					0	0	0			REV__nc|ENSG00000108018|Q8WY21-4|SORCS1	REV__nc|ENSG00000108018|Q8WY21-4|SORCS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.252197265625	2	455.716882	909.41921	0.38579	0.00017581	0.78709	0.00035869	1.1729	0.0005345	455.71714049044317	29.647	1.0742	29.557	28.974	30.048	-0.089546					53	24	3	0	0	0	0.4196	1	1955	1955		25.574	0	1	379620	+		55520	17690	37064	37079	62818	62818					-0.03912255412990362
SRGESRLR	8	Unmodified	_SRGESRLR_					0	0	0		ENST00000593085.1_1_19:33878252-33879176:-|nuORF	ENST00000593085.1_1_19:33878252-33879176:-|nuORF	ENST00000593085.1_1_19:33878252-33879176:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.77001953125	2	480.770314	959.526075	0.27327	0.00013138	2.2511	0.0010823	2.5244	0.0012137	480.77122608691184	41.141	0.55666	41.11	40.864	41.421	-0.030991					39	15	3	0	0	0	0.23374	1	2980	2980		107.01	5.7549	1	435130			55521	14304	37065	37080	62819	62819					0.04469339592048982
SRGGIKLTTV	10	Unmodified	_SRGGIKLTTV_					0	0	0			REV__ENST00000369836.8_1_1:110198802-110199018:+|nuORF	REV__ENST00000369836.8_1_1:110198802-110199018:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.316162109375	2	516.314023	1030.61349	0.87081	0.00044961	-0.74478	-0.00038454	0.12603	6.5071E-05	516.313628553853	118.82	0.58643	118.84	118.61	119.19	0.026466					32	24	2	0	0	0	0.86444	1	13116	13116		14.865	0.20078	1	55044	+		55522	25632	37066	37081	62820	62820					0.09941120742905696
SRGGTRELL	9	Unmodified	_SRGGTRELL_					0	0	0		nc|ENSG00000143970|Q76L83-2|ASXL2;ENSG00000143970|ENST00000435504|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.78009033203125	2	494.780348	987.546142	1.0619	0.0005254	-1.0199	-0.00050462	0.042	2.0781E-05	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.7932	1	8923	8923		26.693	0	1	657500			55523	4680	37067	37082	62821	62821					0.051870905319901794
SRGGVPRP	8	Unmodified	_SRGGVPRP_					0	0	0		ENST00000568712.1_1_15:79063704-79103562:-|nuORF	ENST00000568712.1_1_15:79063704-79103562:-|nuORF	ENST00000568712.1_1_15:79063704-79103562:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2379150390625	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.89043	1	7098	7098		35.618	0.41757	1	1692300			55524	13967	37068	37083	62822	62822					0.04243184505901354
SRGGVRVIS	9	Unmodified	_SRGGVRVIS_					0	0	0			REV__nc|ENSG00000124201|Q9P2E3-2|ZNFX1	REV__nc|ENSG00000124201|Q9P2E3-2|ZNFX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7779235839844	2	465.777608	929.540663	-1.4399	-0.00067067	1.3241	0.00061674	-0.1158	-5.3938E-05	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.7932	1	7498	7498		24.519	0.015177	1	287800	+		55525	18567	37069	37084	62823	62823					0.07307411740191583
SRGKDLSDRST	11	Unmodified	_SRGKDLSDRST_					0	0	0		ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3153686523438	2	611.31274	1220.61093	-0.40573	-0.00024803	3.8155	0.0023325	3.4098	0.0020845	611.3149614030243	110.6	0.66887	110.54	110.34	111.01	-0.055084					50	20	3	0	0	0	0.62914	1	12035	12035		41.08	4.6333	1	366430			55526	14385	37070	37085	62824	62824					0.009446205473068403
SRGKDLSDRST	11	Unmodified	_SRGKDLSDRST_					0	0	0		ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	611.31274	1220.61093	-0.13201	-8.0702E-05	3.5712	0.0021831	3.4392	0.0021024	611.3147094694536	110.55	0.99132	110.55	110.34	111.33	0	0.15825	0.00044072	NaN	41.08	46	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188640			55527	14385	37070	37085							0.009446205473068403
SRGKDLSDRST	11	Unmodified	_SRGKDLSDRST_					0	0	0		ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	611.31274	1220.61093	1.1502	0.00070312	2.101	0.0012844	3.2512	0.0019875	611.3137409729686	110.23	0.33382	110.34	110.21	110.54	0.11658	-0.048584	-0.0013567	NaN	41.08	13	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	184660			55528	14385	37070	37085							0.009446205473068403
SRGKDLSDRST	11	Unmodified	_SRGKDLSDRST_					0	0	0		ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	611.31274	1220.61093	0.9114	0.00055715	2.4561	0.0015014	3.3675	0.0020586	611.3141837483292	110.3	0.3947	110.38	110.22	110.61	0.073685	-0.014872	-0.00092262	NaN	41.08	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	246210			55529	14385	37070	37085							0.009446205473068403
SRGKDLSDRST	11	Unmodified	_SRGKDLSDRST_					0	0	0		ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	611.31274	1220.61093	-1.2527	-0.00076577	4.3233	0.0026429	3.0706	0.0018771	611.3151045681134	110.35	0.37608	110.34	110.16	110.53	-0.0074387	-0.055454	0.0013603	NaN	41.08	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189540			55530	14385	37070	37085							0.009446205473068403
SRGKDLSDRST	11	Unmodified	_SRGKDLSDRST_					0	0	0		ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	ENST00000601046.5_1_10:3185227-3206297:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	611.31274	1220.61093	5.8251	0.003561	-1.737	-0.0010618	4.0881	0.0024991	611.3114944056816	110.04	0.23607	110.11	110	110.23	0.068001	-0.2882	-0.0060492	NaN	41.08	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	513600			55531	14385	37070	37085							0.009446205473068403
SRGKLVVFLCS	11	Unmodified	_SRGKLVVFLCS_					0	0	0			REV__ENST00000261015.4_1_2:203776239-203776329:-|nuORF	REV__ENST00000261015.4_1_2:203776239-203776329:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.8469848632812	2	604.844633	1207.67471	-0.26186	-0.00015838	2.8156	0.001703	2.5538	0.0015446	604.8462755020705	96.346	2.6632	96.346	95.357	98.02	0					132	61	3	0	0	0	0.72739	1	9704	9704		27.047	0.3544	1	263320	+		55532	24375	37071	37086	62825	62825					0.07918309450724337
SRGKPPGAAS	10	Unmodified	_SRGKPPGAAS_					0	0	0		chr16:21681825-21685230|28|10.82|0.19|5.81|+|2|OTOA,OTOA|1	chr16:21681825-21685230|28|10.82|0.19|5.81|+|2|OTOA,OTOA|1	chr16:21681825-21685230|28|10.82|0.19|5.81|+|2|OTOA,OTOA|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2539367675781	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.80179	1	8463	8463		39.253	5.0803	1	1449300			55533	200	37072	37087	62826	62826					0.027191324691784757
SRGKPPGAAS	10	Unmodified	_SRGKPPGAAS_					0	0	0		chr16:21681825-21685230|28|10.82|0.19|5.81|+|2|OTOA,OTOA|1	chr16:21681825-21685230|28|10.82|0.19|5.81|+|2|OTOA,OTOA|1	chr16:21681825-21685230|28|10.82|0.19|5.81|+|2|OTOA,OTOA|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2538146972656	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.78666	2	8358	8358;8739		40.058	4.9061	1	1673200			55534	200	37072	37087	62827;62828	62827					0.027191324691784757
SRGKPPGAAS	10	Unmodified	_SRGKPPGAAS_					0	0	0		chr16:21681825-21685230|28|10.82|0.19|5.81|+|2|OTOA,OTOA|1	chr16:21681825-21685230|28|10.82|0.19|5.81|+|2|OTOA,OTOA|1	chr16:21681825-21685230|28|10.82|0.19|5.81|+|2|OTOA,OTOA|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2539367675781	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.78666	1	8252	8252		40.058	2.2467	1	1482000			55535	200	37072	37087	62829	62829					0.027191324691784757
SRGKPSGF	8	Unmodified	_SRGKPSGF_					0	0	0			REV__nc|ENSG00000084112|Q8WYL5-4|SSH1	REV__nc|ENSG00000084112|Q8WYL5-4|SSH1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2398376464844	2	418.224677	834.434801	3.0835	0.0012896	3.3123	0.0013853	6.3958	0.0026749	418.22600371160604	88.315	1.3665	88.365	87.945	89.312	0.050415					52	32	2	0	0	0	0.4196	1	9111	9111		29.15	7.1897	1	330710	+		55536	16870	37073	37088	62830	62830					0.010960758947135218
SRGKVLKTKDD	11	Unmodified	_SRGKVLKTKDD_					0	0	0		ENST00000513674.1_1_3:98309490-98311971:-|nuORF	ENST00000513674.1_1_3:98309490-98311971:-|nuORF	ENST00000513674.1_1_3:98309490-98311971:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2844543457031	3	416.241976	1245.7041	1.0712	0.00044589	4.0318	0.0016782	5.103	0.0021241	416.24365902493486	24.786	0.6324	24.458	24.116	24.748	-0.32825					30	13	3	0	0	0	0.17244	1	1241	1241		10.562	6.9428	1	129590			55537	13058	37074	37089	62831	62831					0.09107545000574646
SRGLGCSISSG	11	Unmodified	_SRGLGCSISSG_					0	0	0		ENSG00000006611|ENST00000005226|USH1C;nc|ENSG00000006611|Q9Y6N9-3|USH1C;nc|ENSG00000006611|Q9Y6N9-2|USH1C;nc|ENSG00000006611|Q9Y6N9-4|USH1C;nc|ENSG00000006611|Q9Y6N9|USH1C	ENSG00000006611|ENST00000005226|USH1C	ENSG00000006611|ENST00000005226|USH1C	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.24658203125	2	512.248023	1022.48149	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.521	1	66.654	66.154	67.154	0.13326								0	0	0	0.56276	1	5906	5906		29.17	0.020503	1				55538	705	37075	37090	62832	62832					-0.02884852336296717
SRGLLITW	8	Unmodified	_SRGLLITW_					0	0	0			REV__ENSG00000095319|ENST00000372577|NUP188	REV__ENSG00000095319|ENST00000372577|NUP188	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	473.2770690917969	2	473.279452	944.544351	-0.93165	-0.00044093	-2.8443	-0.0013462	-3.776	-0.0017871	473.27808540575296	79.74	0.94202	79.871	79.202	80.144	0.13086					45	31	2	0	0	0	0.79929	1	7562	7562		18.324	0.8564	1	61816	+		55539	17057	37076	37091	62833	62833					0.06986081514037323
SRGLPRLSA	9	Unmodified	_SRGLPRLSA_					0	0	0			REV__chr2:68319466-68319693|45|10.89|0.3|5.16|-|0|CNRIP1,None|1	REV__chr2:68319466-68319693|45|10.89|0.3|5.16|-|0|CNRIP1,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.7858581542969	2	478.785433	955.556313	-0.098425	-4.7125E-05	1.3612	0.00065172	1.2628	0.00060459	478.78530530827464	92.434	2.0709	92.504	91.595	93.666	0.06987					117	48	4	0	0	0	0.78983	1	9607	9607		27.882	1.0861	1	727550	+		55540	15765	37077	37092	62834	62834					0.0767569825721921
SRGPCFLPG	9	Unmodified	_SRGPCFLPG_					0	0	0		nc|ENSG00000124615|Q9NZB8-6|MOCS1;nc|ENSG00000124615|Q9NZB8-8|MOCS1	nc|ENSG00000124615|Q9NZB8-6|MOCS1	nc|ENSG00000124615|Q9NZB8-6|MOCS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.23193359375	2	467.234187	932.453822	-0.26264	-0.00012271	-2.1411	-0.0010004	-2.4037	-0.0011231	467.23346633413524	64.606	2.155	65.159	64.517	66.672	0.55386					169	56	5	0	0	0	0.76764	1	7182	7182		34.173	1.3601	1	8508300			55541	14889	37078	37093	62835	62835					-0.01510710805882809
SRGPLILLRP	10	Unmodified	_SRGPLILLRP_					0	0	0			REV__L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|44|2|sense	REV__L1MA6_dup23|chr1:41167702-41170310:-|2.286845973914474|0.4095800054028756|2.48|63.0|44|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.364013671875	2	561.361308	1120.70806	0.36083	0.00020256	3.644	0.0020456	4.0049	0.0022482	561.3631992343464	46.11	1.1029	46.106	45.577	46.68	-0.0041618					45	26	2	0	0	0	0.86047	1	3702	3702		23.523	4.4192	1	163920	+		55542	29501	37079	37094	62836	62836					0.15253679284933241
SRGPQVLGGG	10	Unmodified	_SRGPQVLGGG_					0	0	0			REV__nc|ENSG00000211965|A0A0A0MS15|IGHV3-49	REV__nc|ENSG00000211965|A0A0A0MS15|IGHV3-49	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25372314453125	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.86348	1	8326	8326		31.53	1.0262	1	1482000	+		55543	30196	37080	37095	62837	62837					0.027191324691898444
SRGPRLSQ	8	Unmodified	_SRGPRLSQ_					0	0	0		nc|ENSG00000162849|Q2KJY2-2|KIF26B;chr1:245511128-245540767|14|19.0|0.13|7.16|+|ENST00000366518|KIF26B,KIF26B;ENSG00000162849|ENST00000407071|KIF26B	nc|ENSG00000162849|Q2KJY2-2|KIF26B	nc|ENSG00000162849|Q2KJY2-2|KIF26B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7548828125	2	450.754133	899.493713	-1.5537	-0.00070033	1.6807	0.0007576	0.12705	5.7268E-05	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.87422	1	7670	7670		30.318	1.1477	1	298090			55544	46	37081	37096	62838	62838					0.03994552189033129
SRGPRVPG	8	Unmodified	_SRGPRVPG_					0	0	0		ENST00000339083.11_2_1:113243775-113244075:-|nuORF	ENST00000339083.11_2_1:113243775-113244075:-|nuORF	ENST00000339083.11_2_1:113243775-113244075:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2374267578125	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.8347	1	7474	7474		23.042	2.5607	1	2012200			55545	10212	37082	37097	62839	62839					0.04243184505901354
SRGPSRPL	8	Unmodified	_SRGPSRPL_					0	0	0			REV__ENSG00000143443|ENST00000368926|C1orf56	REV__ENSG00000143443|ENST00000368926|C1orf56	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25201416015625	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87479	1	7310	7310		30.504	0	1	2494100	+		55546	19812	37083	37098	62840	62840					0.048394536773685104
SRGRGPRECD	10	Unmodified	_SRGRGPRECD_					0	0	0			REV__nc|ENSG00000131242|Q86YS3-2|RAB11FIP4	REV__nc|ENSG00000131242|Q86YS3-2|RAB11FIP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	566.7662963867188	2	566.767446	1131.52034	-0.95062	-0.00053878	0.091475	5.1845E-05	-0.85915	-0.00048694	566.7671988907111	46.387	0.61588	46.373	46.103	46.719	-0.013821					29	15	3	0	0	0	0.86471	1	3713	3713		30.318	0.47618	1	206300	+		55547	18942	37084	37099	62841	62841					-0.04016126981923662
SRGRGRLH	8	Unmodified	_SRGRGRLH_					0	0	0		ENST00000269025.8_1_17:45909270-45909508:+|nuORF;ENST00000336156.9_1_22:45592780-45592966:-|nuORF	ENST00000269025.8_1_17:45909270-45909508:+|nuORF	ENST00000269025.8_1_17:45909270-45909508:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	469.7703857421875	2	469.773191	937.531829	-1.8101	-0.00085035	-2.2827	-0.0010724	-4.0929	-0.0019227	469.7719480948623	39.072	0.60578	39.072	38.816	39.422	0					23	14	2	0	0	0	0.84341	1	2489	2489		24.203	3.7209	1	91736			55548	9545	37085	37100	62842	62842					0.060564828943597604
SRGRLGLP	8	Unmodified	_SRGRLGLP_					0	0	0			REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.1888732910156	2	428.261594	854.508634	1.4474	0.00061987	-1.2795	-0.00054796	0.16791	7.1908E-05	428.26095467975534	94.882	1.3265	95.315	94.757	96.083	0.4324					51	31	2	0	0	0	0.4196	1	11389	11389		11.511	0	1	236800	+		55549	29089	37086	37101	62843	62843					0.07556044057025701
SRGRLGLP	8	Unmodified	_SRGRLGLP_					0	0	0			REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	428.261594	854.508634	-1.0712	-0.00045877	1.2716	0.00054459	0.20038	8.5815E-05	428.2620700361317	95.525	1.9438	95.525	94.693	96.637	0	0.16014	0.001132	NaN	11.511	86	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	277780	+		55550	29089	37086	37101							0.07556044057025701
SRGRLGLP	8	Unmodified	_SRGRLGLP_					0	0	0			REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	428.261594	854.508634	-0.1784	-7.6402E-05	0.43259	0.00018526	0.25419	0.00010886	428.2617184671145	95.381	2.5299	95.446	94.468	96.998	0.06591	0.08176	0.00041339	NaN	11.511	129	59	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	533050	+		55551	29089	37086	37101							0.07556044057025701
SRGRLGLP	8	Unmodified	_SRGRLGLP_					0	0	0			REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	428.261594	854.508634	1.9293	0.00082627	-1.67	-0.00071519	0.25936	0.00011107	428.2608147602229	95.384	2.2779	95.327	94.392	96.67	-0.057526	-0.038155	-0.0013875	NaN	11.511	93	53	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	492620	+		55552	29089	37086	37101							0.07556044057025701
SRGRLGLP	8	Unmodified	_SRGRLGLP_					0	0	0			REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	428.261594	854.508634	2.6355	0.0011287	-2.3635	-0.0010122	0.27194	0.00011646	428.2605014773083	95.232	1.9491	95.279	94.577	96.526	0.046982	-0.085378	-0.0019816	NaN	11.511	102	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	425080	+		55553	29089	37086	37101							0.07556044057025701
SRGRLGLP	8	Unmodified	_SRGRLGLP_					0	0	0			REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	428.261594	854.508634	-1.658	-0.00071007	1.915	0.00082011	0.25694	0.00011004	428.26234821028214	95.029	1.9121	95.26	94.611	96.523	0.23103	-0.10448	0.0016831	NaN	11.511	100	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	457970	+		55554	29089	37086	37101							0.07556044057025701
SRGRLGLP	8	Unmodified	_SRGRLGLP_					0	0	0			REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	428.261594	854.508634	0.68373	0.00029282	-0.37411	-0.00016022	0.30962	0.0001326	428.2613646662208	95.123	2.1141	95.286	94.289	96.403	0.16308	-0.078455	-0.00027757	NaN	11.511	92	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	485080	+		55555	29089	37086	37101							0.07556044057025701
SRGRLGLP	8	Unmodified	_SRGRLGLP_					0	0	0			REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	REV__ENST00000585274.1_1_17:79967368-79974654:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	428.261594	854.508634	-1.8497	-0.00079216	2.0535	0.00087944	0.20379	8.7275E-05	428.26236996968095	95.165	2.3875	95.367	94.403	96.791	0.20241	0.0024304	0.0018017	NaN	11.511	106	56	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410010	+		55556	29089	37086	37101							0.07556044057025701
SRGRLPPAR	9	Unmodified	_SRGRLPPAR_					0	0	0		ENST00000584106.1_1_17:37026345-37026510:+|nuORF	ENST00000584106.1_1_17:37026345-37026510:+|nuORF	ENST00000584106.1_1_17:37026345-37026510:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.7684020996094	2	505.304324	1008.5941	0.80123	0.00040486	-3.1837	-0.0016087	-2.3824	-0.0012039	505.3027171819687	19.239	0.31087	18.609	18.49	18.801	-0.6296					11	6	2	0	0	0	0.20789	1	508	508		21.96	1.9631	1	69611			55557	14129	37087	37102	62844	62844					0.09014209242684501
SRGRLPPAR	9	Unmodified	_SRGRLPPAR_					0	0	0		ENST00000584106.1_1_17:37026345-37026510:+|nuORF	ENST00000584106.1_1_17:37026345-37026510:+|nuORF	ENST00000584106.1_1_17:37026345-37026510:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	505.304324	1008.5941	0.44995	0.00022736	-3.1171	-0.0015751	-2.6671	-0.0013477	505.3027663109778	19.079	0.26655	18.606	18.52	18.787	-0.47325	-0.0017318	4.8351E-05	NaN	21.96	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33435			55558	14129	37087	37102							0.09014209242684501
SRGRRSRSA	9	Unmodified	_SRGRRSRSA_					0	0	0		ENST00000425941.6_1_2:38972277-38976074:-|nuORF;ENST00000425778.5_1_2:38972277-38976074:-|nuORF;ENST00000487773.1_1_2:38972277-38975875:-|nuORF;ENST00000431066.5_1_2:38972277-38975875:-|nuORF;ENST00000443213.5_1_2:38972277-38975875:-|nuORF;nc|ENSG00000115875|Q16629-4|SRSF7;ENSG00000115875|ENST00000313117|SRSF7	ENST00000425941.6_1_2:38972277-38976074:-|nuORF	ENST00000425941.6_1_2:38972277-38976074:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.791259765625	2	516.792112	1031.56967	-0.047699	-2.465E-05	2.4599	0.0012712	2.4122	0.0012466	516.793282030647	86.386	2.8071	86.453	84.68	87.487	0.067436					129	64	3	0	0	0	0.78124	1	8677	8677		30.318	0	1	264930			55559	2878	37088	37103	62845	62845					0.05514949089183574
SRGRRSRSA	9	Unmodified	_SRGRRSRSA_					0	0	0		ENST00000425941.6_1_2:38972277-38976074:-|nuORF;ENST00000425778.5_1_2:38972277-38976074:-|nuORF;ENST00000487773.1_1_2:38972277-38975875:-|nuORF;ENST00000431066.5_1_2:38972277-38975875:-|nuORF;ENST00000443213.5_1_2:38972277-38975875:-|nuORF;nc|ENSG00000115875|Q16629-4|SRSF7;ENSG00000115875|ENST00000313117|SRSF7	ENST00000425941.6_1_2:38972277-38976074:-|nuORF	ENST00000425941.6_1_2:38972277-38976074:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7936401367188	2	516.792112	1031.56967	-0.047502	-2.4548E-05	2.6801	0.0013851	2.6326	0.0013605	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.78912	1	9103	9103		28.081	0	1	692890			55560	2878	37088	37103	62846	62846					0.05514949089183574
SRGRRSRSA	9	Unmodified	_SRGRRSRSA_					0	0	0		ENST00000425941.6_1_2:38972277-38976074:-|nuORF;ENST00000425778.5_1_2:38972277-38976074:-|nuORF;ENST00000487773.1_1_2:38972277-38975875:-|nuORF;ENST00000431066.5_1_2:38972277-38975875:-|nuORF;ENST00000443213.5_1_2:38972277-38975875:-|nuORF;nc|ENSG00000115875|Q16629-4|SRSF7;ENSG00000115875|ENST00000313117|SRSF7	ENST00000425941.6_1_2:38972277-38976074:-|nuORF	ENST00000425941.6_1_2:38972277-38976074:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7927856445312	2	516.792112	1031.56967	-1.1229	-0.00058032	3.5437	0.0018313	2.4208	0.001251	516.7939356050468	88.475	2.4458	88.946	87.694	90.139	0.47068					178	59	4	0	0	0	0.78983	1	10364	10364		27.882	0	1	833210			55561	2878	37088	37103	62847	62847					0.05514949089183574
SRGTARQQ	8	Unmodified	_SRGTARQQ_					0	0	0		ENST00000378302.6_1_13:50154676-50159640:-|nuORF;ENST00000378302.6_1_13:50141428-50159648:-|nuORF	ENST00000378302.6_1_13:50154676-50159640:-|nuORF	ENST00000378302.6_1_13:50154676-50159640:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2391052246094	2	452.24139	902.468226	-0.38468	-0.00017397	-3.4479	-0.0015593	-3.8326	-0.0017333	452.23969293569223	25.238	1.266	24.91	24.476	25.742	-0.32825					51	28	3	0	0	0	0.83456	1	1273	1273		60.972	5.4677	1	474500			55562	10861	37089	37104	62848	62848					0.01309077666610392
SRGTGDQIR	9	Unmodified	_SRGTGDQIR_					0	0	0			REV__ENST00000542095.6_2_12:8234884-8244447:+|nuORF	REV__ENST00000542095.6_2_12:8234884-8244447:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25994873046875	2	495.259779	988.505006	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.72	1	35.968	35.468	36.468	0.24769								0	0	0	0.41487	1	2751	2751		56.434	6.9922	1		+		55563	16976	37090	37105	62849	62849					0.010293294925304508
SRGTLRPSA	9	Unmodified	_SRGTLRPSA_					0	0	0			REV__ENST00000609350.1_1_2:128644156-128644243:+|nuORF	REV__ENST00000609350.1_1_2:128644156-128644243:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.76702880859375	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.6204	1	8618	8618		45.972	10.354	1	547170	+		55564	29412	37091	37106	62850	62850					0.045908213605116543
SRGTLRPSA	9	Unmodified	_SRGTLRPSA_					0	0	0			REV__ENST00000609350.1_1_2:128644156-128644243:+|nuORF	REV__ENST00000609350.1_1_2:128644156-128644243:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	472.76724	943.519927	-0.27242	-0.00012879	0.42218	0.00019959	0.14976	7.0803E-05	472.767370591131	83.796	3.9172	84.231	83.091	87.009	0.43538	0.16532	-2.1125E-05	NaN	45.972	158	95	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	358690	+		55565	29412	37091	37106							0.045908213605116543
SRGWPAPVL	9	Unmodified	_SRGWPAPVL_					0	0	0			REV__ENST00000563306.5_1_16:46723594-46723633:+|nuORF	REV__ENST00000563306.5_1_16:46723594-46723633:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7760925292969	2	491.777077	981.5396	-1.0869	-0.00053451	-0.29573	-0.00014543	-1.3826	-0.00067995	491.77681648122257	71.442	1.0777	71.827	71.42	72.497	0.38449					55	25	3	0	0	0	0.22631	1	7958	7958		71.296	7.9894	1	555920	+		55566	28818	37092	37107	62851	62851					0.04809197371275786
SRGYDADMIG	10	Unmodified	_SRGYDADMIG_					0	0	0			REV__ENST00000302450.10_1_2:113496273-113496327:-|nuORF	REV__ENST00000302450.10_1_2:113496273-113496327:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	542.7406005859375	2	542.740031	1083.46551	0.19272	0.00010459	-0.1323	-7.1805E-05	0.060415	3.279E-05	542.7398530998665	28.525	0.51326	28.637	28.336	28.849	0.11225					51	27	2	0	0	0	0.86348	1	1169	1169		31.53	5.4664	1	140290	+		55567	24784	37093	37108	62852	62852					-0.07288558573213777
SRHDPASRR	9	Unmodified	_SRHDPASRR_					0	0	0		ENST00000566581.5_1_15:34656349-34659376:-|nuORF;ENSG00000176454|ENST00000314891|LPCAT4	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	541.2852783203125	2	541.28412	1080.55369	-0.03411	-1.8463E-05	2.3706	0.0012832	2.3365	0.0012647	541.2852539675774	20.45	0.7453	20.494	20.171	20.916	0.043749					88	36	3	0	0	0	0.71772	1	503	503		39.253	7.723	1	513130			55568	7082	37094	37109	62853	62853					0.016632428522598275
SRHPSKTA	8	Unmodified	_SRHPSKTA_					0	0	0			REV__ENSG00000214700|ENST00000429849|C12orf71	REV__ENSG00000214700|ENST00000429849|C12orf71	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2408142089844	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.89043	1	8290	8290		35.618	0	1	1238700	+		55569	23659	37095	37110	62854	62854					0.021228632977113193
SRHQYHALP	9	Unmodified	_SRHQYHALP_					0	0	0		ENSG00000102096|ENST00000376509|PIM2;ENST00000485431.1_1_X:48771410-48771858:-|nuORF	ENSG00000102096|ENST00000376509|PIM2	ENSG00000102096|ENST00000376509|PIM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.7841796875	2	554.785964	1107.55738	-0.81751	-0.00045354	-0.53688	-0.00029786	-1.3544	-0.0007514	554.7857639593342	57.552	0.57157	57.539	57.272	57.843	-0.013641					54	22	3	0	0	0	0.64922	1	5233	5233		44.117	1.2525	1	273210			55570	1989	37096	37111	62855	62855					0.007899126261236233
SRHVEVRM	8	Unmodified	_SRHVEVRM_					0	0	0		ENST00000509985.1_1_4:146085321-146095893:-|nuORF;ENST00000237841.5_1_12:3948629-3949796:+|nuORF;ENST00000455611.6_1_4:146049153-146095893:-|nuORF;ENSG00000164164|ENST00000447906|OTUD4	ENST00000509985.1_1_4:146085321-146095893:-|nuORF	ENST00000509985.1_1_4:146085321-146095893:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	507.3015441894531	2	507.269093	1012.52363	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.934	1	34.878	34.378	35.378	-0.055149								0	0	0	0.29747	1	1796	1796		37.812	9.9293	1				55571	5929	37097	37112	62856	62856					0.017871678627329857
SRIFGHPTL	9	Unmodified	_SRIFGHPTL_					0	0	0		ENST00000251166.8_1_16:4404717-4405131:-|nuORF	ENST00000251166.8_1_16:4404717-4405131:-|nuORF	ENST00000251166.8_1_16:4404717-4405131:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.7549438476562	2	514.287808	1026.56106	0.60042	0.00030879	-2.7676	-0.0014234	-2.1672	-0.0011146	514.2863933544256	55.17	0.50186	55.571	55.364	55.866	0.40101					17	11	2	0	0	0	0.20789	1	5652	5652		3.1592	0	1	187930			55572	9299	37098	37113	62857	62857					0.04884582399995452
SRIFLLSC	8	Unmodified	_SRIFLLSC_					0	0	0		ENST00000518113.1_1_8:63936688-63938722:-|nuORF	ENST00000518113.1_1_8:63936688-63938722:-|nuORF	ENST00000518113.1_1_8:63936688-63938722:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7602233886719	2	469.760038	937.505523	-1.0554	-0.00049577	2.1593	0.0010144	1.1039	0.00051859	469.7608617085479	40.328	1.2889	40.334	40.071	41.36	0.0065002					73	45	3	0	0	0	0.89043	1	2562	2562		35.618	3.6634	1	435990			55573	13114	37099	37114	62858	62858					0.03427032888021131
SRIGGTGPV	9	Unmodified	_SRIGGTGPV_					0	0	0			REV__ENST00000292140.9_1_19:44008121-44008847:-|nuORF	REV__ENST00000292140.9_1_19:44008121-44008847:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.23895263671875	2	422.237784	842.461016	1.7913	0.00075635	1.5592	0.00065835	3.3505	0.0014147	422.2383363429697	70.18	1.527	70.215	69.949	71.476	0.035622					112	79	2	0	0	0	0.64922	1	6722	6722		44.117	0	1	383600	+		55574	24674	37100	37115	62859	62859					0.033483450661947245
SRIIQYLFLI	10	Unmodified	_SRIIQYLFLI_					0	0	0		ENSG00000088035|ENST00000263440|ALG6	ENSG00000088035|ENST00000263440|ALG6	ENSG00000088035|ENST00000263440|ALG6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3253784179688	2	633.384448	1264.75434	-0.39337	-0.00024915	2.2338	0.0014149	1.8405	0.0011657	633.3860694603786	58.63	0.91444	58.664	58.304	59.218	0.033905					49	29	2	0	0	0	0.37624	1	5444	5444		14.137	0	1	58708			55575	1583	37101	37116	62860	62860					0.13255699396381715
SRIIQYLFLI	10	Unmodified	_SRIIQYLFLI_					0	0	0		ENSG00000088035|ENST00000263440|ALG6	ENSG00000088035|ENST00000263440|ALG6	ENSG00000088035|ENST00000263440|ALG6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3251953125	2	633.384448	1264.75434	0.56229	0.00035614	0.56398	0.00035722	1.1263	0.00071336	633.8856483096182	59.616	0.53702	59.73	59.473	60.01	0.11397					25	16	2	0	0	0	0.37624	1	5104	5104		27.882	0	1	126220			55576	1583	37101	37116	62861	62861					0.13255699396381715
SRILKAKNS	9	Unmodified	_SRILKAKNS_					0	0	0		ENST00000399070.3_2_18:32871138-32886085:+|nuORF	ENST00000399070.3_2_18:32871138-32886085:+|nuORF	ENST00000399070.3_2_18:32871138-32886085:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8153381347656	2	508.81419	1015.61383	-0.63775	-0.0003245	1.2358	0.0006288	0.59806	0.0003043	508.81487501461754	43.667	3.2315	44.117	43.686	46.917	0.45025					183	79	5	0	0	0	0.33718	1	4060	4060		62.107	0	1	105110000			55577	11199	37102	37117	62862	62862					0.10664540462801142
SRILKQPRSH	10	Unmodified	_SRILKQPRSH_					0	0	0		ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	407.9146423339844	3	407.910672	1220.71019	-1.9384	-0.00079068	-0.28024	-0.00011431	-2.2186	-0.00090499	407.91032997971223	16.033	0.21877	16.081	15.944	16.163	0.047802					15	9	2	0	0	0	0.85633	1	106	106		21.686	0.65352	1	41818			55578	3051	37103	37118	62863	62863					0.10866108022742083
SRILVPAAW	9	Unmodified	_SRILVPAAW_					0	0	0		nc|ENSG00000103154|Q7Z6G3-2|NECAB2;ENSG00000103154|ENST00000305202|NECAB2	nc|ENSG00000103154|Q7Z6G3-2|NECAB2	nc|ENSG00000103154|Q7Z6G3-2|NECAB2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.310302734375	2	506.800552	1011.58655	-0.42063	-0.00021318	2.4545	0.001244	2.0339	0.0010308	506.80158884988015	54.993	1.2551	54.944	54.323	55.578	-0.049271					53	37	2	0	0	0	0.20789	1	4556	4556		19.104	2.6304	1	173270			55579	2057	37104	37119	62864	62864					0.08122056922411502
SRINIFPY	8	Unmodified	_SRINIFPY_					0	0	0			REV__nc|ENSG00000117036|P41162-2|ETV3	REV__nc|ENSG00000117036|P41162-2|ETV3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3460693359375	2	505.276909	1008.53927	0.45378	0.00022929	-0.068438	-3.458E-05	0.38535	0.00019471	505.2768887421893	53.259	0.87195	53.874	53.449	54.321	0.61436					43	20	3	0	0	0	0.4196	1	5373	5373		35.201	0	1	371670	+		55580	18244	37105	37120	62865	62865					0.03533777651421133
SRIPSYSGL	9	Unmodified	_SRIPSYSGL_					0	0	0			REV__ENSG00000198853|ENST00000361226|RUSC2	REV__ENSG00000198853|ENST00000361226|RUSC2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.2646179199219	2	490.263999	978.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.733	1	40.702	40.202	41.202	-0.030991								0	0	0	0.37744	1	2923	2923		51.335	1.7994	1		+		55581	23398	37106	37121	62866	62866					0.023328834091330464
SRIQASSETK	10	Unmodified	_SRIQASSETK_					0	0	0		ENST00000322315.5_1_19:3590178-3593283:+|nuORF	ENST00000322315.5_1_19:3590178-3593283:+|nuORF	ENST00000322315.5_1_19:3590178-3593283:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7872314453125	2	553.793652	1105.57275	0.66339	0.00036738	0.92823	0.00051405	1.5916	0.00088143	554.2949327923619	51.278	0.24811	52.03	51.858	52.106	0.75174					7	5	2	0	0	0	0.37624	1	5091	5091		16.717	3.2633	1	91147			55582	10047	37107	37122	62867	62867					0.02418734632669839
SRIQTGNSAAK	11	Unmodified	_SRIQTGNSAAK_					0	0	0			REV__ENST00000466154.5_1_16:3652081-3658965:-|nuORF	REV__ENST00000466154.5_1_16:3652081-3658965:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	566.8054809570312	2	566.807094	1131.59963	0.86267	0.00048897	-3.762	-0.0021324	-2.8994	-0.0016434	566.804831631569	62.733	2.0024	63.288	62.559	64.561	0.55449					102	46	4	0	0	0	0.40952	1	6725	6725		58.63	3.8533	1	716580	+		55583	23035	37108	37123	62868	62868					0.03909843243832256
SRIRGAALPA	10	Unmodified	_SRIRGAALPA_					0	0	0		ENST00000467201.5_1_7:100174858-100176198:-|nuORF	ENST00000467201.5_1_7:100174858-100176198:-|nuORF	ENST00000467201.5_1_7:100174858-100176198:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.25244140625	2	506.306532	1010.59851	1.2604	0.00063815	3.7607	0.0019041	5.0211	0.0025422	506.30822988462967	49.491	1.8636	50.336	49.35	51.213	0.84501					62	45	2	0	0	0	0.37624	1	4808	4808		15.642	0	1	211970			55584	12151	37109	37124	62869	62869					0.09363673665586703
SRISRDPH	8	Unmodified	_SRISRDPH_					0	0	0		ENST00000565413.1_3_16:2273792-2282300:+|nuORF	ENST00000565413.1_3_16:2273792-2282300:+|nuORF	ENST00000565413.1_3_16:2273792-2282300:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2694396972656	2	484.25704	966.499526	-0.71055	-0.00034409	-1.5785	-0.00076442	-2.2891	-0.0011085	484.25674673462527	59.262	0.34476	59.815	59.653	59.998	0.55323					14	8	2	0	0	0	0.4196	1	6267	6267		29.15	0	1	518800			55585	13913	37110	37125	62870	62870					0.014936507007064392
SRKAEAIGK	9	Unmodified	_SRKAEAIGK_					0	0	0		ENSG00000162881|ENST00000378661|OXER1	ENSG00000162881|ENST00000378661|OXER1	ENSG00000162881|ENST00000378661|OXER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2850646972656	2	480.285266	958.555979	0.94467	0.00045371	-0.56763	-0.00027263	0.37704	0.00018109	480.28500315130725	25.051	0.49612	24.723	24.476	24.972	-0.32825					22	10	3	0	0	0	0.6204	1	1261	1261		45.972	0	1	166340			55586	5744	37111	37126	62871	62871					0.0750427853738529
SRKAKQPPA	9	Unmodified	_SRKAKQPPA_					0	0	0			REV__ENSG00000244486|ENST00000622235|SCARF2	REV__ENSG00000244486|ENST00000622235|SCARF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7970275878906	2	491.793258	981.571963	0.44365	0.00021818	3.4816	0.0017122	3.9252	0.0019304	491.7950876173739	61.702	0.68761	61.821	61.679	62.366	0.11901					43	29	2	0	0	0	0.7932	1	5373	5373		24.519	0.99649	1	220410	+		55587	23851	37112	37127	62872	62872					0.08043984774269575
SRKEYCELCK	10	2 Carbamidomethyl (C)	_SRKEYC(Carbamidomethyl (C))ELC(Carbamidomethyl (C))K_	SRKEYC(1)ELC(1)K		SRKEYC(46)ELC(46)K		0	2	0		nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6;ENST00000511802.5_1_5:10353827-10401026:+|nuORF	nc|ENSG00000145495|O60337-5|MARCHF6	nc|ENSG00000145495|O60337-5|MARCHF6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.2162780761719	3	458.216445	1371.62751	-1.5215	-0.00069716	1.8163	0.00083224	0.2948	0.00013508	458.21728661495763	29.779	0.69869	29.808	29.531	30.23	0.028618					40	15	4	0	0	0	0.67689	1	1901	1901		45.908	11.822	1	433090			55588	4773	37113	37128	62873	62873	63;64				-0.04344337882571381
SRKGIFKF	8	Unmodified	_SRKGIFKF_					0	0	0			REV__ENST00000517678.5_1_8:125551227-125551287:-|nuORF	REV__ENST00000517678.5_1_8:125551227-125551287:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7953186035156	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.339	1	60.326	59.826	60.826	-0.013729								0	0	0	0.2939	1	5577	5577		27.882	3.6795	1		+		55589	28049	37114	37129	62874	62874					0.08446074267999393
SRKGIFKF	8	Unmodified	_SRKGIFKF_					0	0	0			REV__ENST00000517678.5_1_8:125551227-125551287:-|nuORF	REV__ENST00000517678.5_1_8:125551227-125551287:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79644775390625	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.87479	1	4043	4043		30.504	3.8107	1	412030	+		55590	28049	37114	37129	62875	62875					0.08446074267999393
SRKGRIYYWNI	11	Unmodified	_SRKGRIYYWNI_					0	0	0		ENST00000335500.8_1_17:42516078-42541999:-|nuORF	ENST00000335500.8_1_17:42516078-42541999:-|nuORF	ENST00000335500.8_1_17:42516078-42541999:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.2856750488281	3	485.933366	1454.77827	0.20747	0.00010082	-0.83236	-0.00040447	-0.62489	-0.00030365	485.9325929571153	60.593	0.62871	60.56	60.247	60.876	-0.032513					19	17	2	0	0	0	0.17289	1	5712	5712		11.932	0	1	60936			55591	10159	37115	37130	62876	62876					0.06906932882748151
SRKIVQVHTKL	11	Unmodified	_SRKIVQVHTKL_					0	0	0			REV__nc|ENSG00000061273|Q8WUI4-3|HDAC7	REV__nc|ENSG00000061273|Q8WUI4-3|HDAC7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2736511230469	3	436.941861	1307.80375	-1.785	-0.00077992	-3.1254	-0.0013656	-4.9104	-0.0021456	436.94038031452806	46.547	1.4604	46.547	46.099	47.56	0					130	44	4	0	0	0	0.75121	1	3475	3475		21.78	0	1	1002300	+		55592	16454	37116	37131	62877	62877					0.1621640740515886
SRKKLLKAHL	10	Unmodified	_SRKKLLKAHL_					0	0	0			REV__ENSG00000164935|ENST00000297581|DCSTAMP	REV__ENSG00000164935|ENST00000297581|DCSTAMP	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.2665405273438	2	597.395682	1192.77681	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.98	1	116.91	116.41	117.41	-0.07531								0	0	0	0.45132	1	12554	12554		10.866	3.6722	1		+		55593	21132	37117	37132	62878	62878					0.1881334358465665
SRKKQKQKLK	10	Unmodified	_SRKKQKQKLK_					0	0	0			REV__ENSG00000256053|ENST00000409074|COA8	REV__ENSG00000256053|ENST00000409074|COA8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.77392578125	3	424.613856	1270.81974	0.50141	0.0002129	4.1392	0.0017576	4.6406	0.0019705	424.61559843545746	16.5	0.41359	15.901	15.74	16.154	-0.59873					10	8	2	0	0	0	0.37624	1	119	119		10.104	5.7651	1	17081	+		55594	23903	37118	37133	62879	62879					0.19516113642089294
SRKLYRKNW	9	Unmodified	_SRKLYRKNW_					0	0	0		ENST00000296028.3_1_4:74852930-74853077:-|nuORF	ENST00000296028.3_1_4:74852930-74853077:-|nuORF	ENST00000296028.3_1_4:74852930-74853077:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.2974548339844	3	417.575401	1249.70437	-1.1679	-0.0004877	1.0809	0.00045136	-0.087036	-3.6344E-05	417.57547669141417	67.489	0.11263	67.541	67.45	67.562	0.052368					4	2	2	0	0	0	0.20789	1	6008	6008		16.717	1.3843	1	45375			55595	9727	37119	37134	62880	62880					0.0895100951108816
SRKMDTVQSI	10	Unmodified	_SRKMDTVQSI_					0	0	0		ENSG00000073711|ENST00000264977|PPP2R3A	ENSG00000073711|ENST00000264977|PPP2R3A	ENSG00000073711|ENST00000264977|PPP2R3A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3535766601562	2	582.805705	1163.59686	0.13379	7.7973E-05	-0.526	-0.00030655	-0.39221	-0.00022858	582.8049761773308	103.69	0.24513	103.73	103.63	103.87	0.041481					7	5	2	0	0	0	0.37624	1	11256	11256		16.007	0	1	47850			55596	1295	37120	37135	62881	62881					0.021602517946803346
SRKQMLKFI	9	Unmodified	_SRKQMLKFI_					0	0	0		ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8428344726562	2	575.841894	1149.66923	1.6833	0.00096931	0.25656	0.00014774	1.9399	0.0011171	575.8419126202111	90.702	2.7581	90.632	88.716	91.474	-0.069977					216	65	4	0	0	0	0.7932	1	9427	9427		23.042	1.0826	1	1939000			55597	7564	37121	37136	62882	62882					0.10038630658937109
SRKQRQPAR	9	Unmodified	_SRKQRQPAR_					0	0	0		ENSG00000119574|ENST00000594051|ZBTB45	ENSG00000119574|ENST00000594051|ZBTB45	ENSG00000119574|ENST00000594051|ZBTB45	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.8331298828125	2	563.831237	1125.64792	1.1189	0.00063088	1.3439	0.00075776	2.4629	0.0013886	563.8318646992443	22.052	0.8838	21.609	21.235	22.119	-0.44324					49	19	3	0	0	0	0.48102	1	827	827		52.937	3.4952	1	572300			55598	3075	37122	37137	62883	62883					0.09012381674415337
SRKRKHRKR	9	Unmodified	_SRKRKHRKR_					0	0	0		ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.9224853515625	3	417.937556	1250.79084	-1.7716	-0.00074044	-1.8726	-0.00078261	-3.6442	-0.001523	417.93667674669274	105.19	0.52989	105.35	105.13	105.66	0.15924					22	13	3	0	0	0	0.20789	1	11227	11227		16.007	0	1	301540			55599	8578	37123	37138	62884	62884					0.17547433856293537
SRKRLSLLFP	10	Unmodified	_SRKRLSLLFP_					0	0	0			REV__ENSG00000181350|ENST00000470794|LRRC75A	REV__ENSG00000181350|ENST00000470794|LRRC75A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2575378417969	3	406.255669	1215.74518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.071	1	55.021	54.521	55.521	-0.049271								0	0	0	0.45132	1	4595	4595		14.086	3.4992	1		+		55600	22453	37124	37139	62885	62885					0.14593350830705276
SRKRLSLLFP	10	Unmodified	_SRKRLSLLFP_					0	0	0			REV__ENSG00000181350|ENST00000470794|LRRC75A	REV__ENSG00000181350|ENST00000470794|LRRC75A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.257080078125	3	406.255669	1215.74518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.407	1	55.37	54.87	55.87	-0.036827								0	0	0	0.45132	1	4641	4641		22.562	0.87584	1		+		55601	22453	37124	37139	62886	62886					0.14593350830705276
SRKRQQRRFFK	11	Unmodified	_SRKRQQRRFFK_					0	0	0		ENST00000288344.14_1_21:40717793-40720258:-|nuORF	ENST00000288344.14_1_21:40717793-40720258:-|nuORF	ENST00000288344.14_1_21:40717793-40720258:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.9700317382812	3	512.970925	1535.89095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.328	1	19.328	18.828	19.828	0								0	0	0	0.56276	1	403	403		9.6461	0	1				55602	9663	37125	37140	62887	62887					0.14443626399429377
SRKRRKREPP	10	Unmodified	_SRKRRKREPP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2679748535156	3	437.268971	1308.78508	-1.7045	-0.00074531	-0.76685	-0.00033532	-2.4713	-0.0010806	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.84763	1	4277	4277		17.833	1.3033	1	3449100			55603	8437	37126	37141	62888	62888					0.1430429055399145
SRKRRKREPP	10	Unmodified	_SRKRRKREPP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26763916015625	3	437.268971	1308.78508	-1.6775	-0.00073351	-0.94072	-0.00041135	-2.6182	-0.0011449	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.86338	1	4535	4535		31.634	3.0575	1	2305800			55604	8437	37126	37141	62889	62889					0.1430429055399145
SRKRRKREPP	10	Unmodified	_SRKRRKREPP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.267578125	3	437.268971	1308.78508	-0.73822	-0.0003228	-1.7923	-0.00078371	-2.5305	-0.0011065	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.86931	1	4498	4498		14.086	1.1285	1	3639500			55605	8437	37126	37141	62890	62890					0.1430429055399145
SRKRRKREPP	10	Unmodified	_SRKRRKREPP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2678527832031	3	437.268971	1308.78508	-1.575	-0.00068869	-0.91628	-0.00040066	-2.4913	-0.0010893	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.86014	1	4058	4058		23.378	1.5975	1	3429700			55606	8437	37126	37141	62891	62891					0.1430429055399145
SRKRRKREPP	10	Unmodified	_SRKRRKREPP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2677001953125	3	437.268971	1308.78508	-1.5693	-0.00068621	-1.1187	-0.00048918	-2.688	-0.0011754	437.2683683670783	53.718	2.085	53.765	52.872	54.957	0.047806					225	71	5	0	0	0	0.84763	1	4382	4382		17.833	0	1	2544700			55607	8437	37126	37141	62892	62892					0.1430429055399145
SRKRRKREPP	10	Unmodified	_SRKRRKREPP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.602294921875	3	437.268971	1308.78508	0.28665	0.00012534	-2.7691	-0.0012109	-2.4825	-0.0010855	437.2676689275105	50.631	1.3868	50.681	50.015	51.402	0.049896					192	41	5	0	0	0	0.85654	1	3945	3945		21.78	2.5177	1	2963500			55608	8437	37126	37141	62893	62893					0.1430429055399145
SRKRRKREPP	10	Unmodified	_SRKRRKREPP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2679748535156	3	437.268971	1308.78508	-0.53561	-0.00023421	-1.9117	-0.00083594	-2.4473	-0.0010701	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.85086	1	4111	4111		19.263	0.73163	1	4132000			55609	8437	37126	37141	62894	62894					0.1430429055399145
SRKRRKREPP	10	Unmodified	_SRKRRKREPP_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2679138183594	3	437.268971	1308.78508	0.78043	0.00034126	-3.5508	-0.0015526	-2.7704	-0.0012114	437.26733211231357	49.246	1.5472	50.15	49.725	51.272	0.90424					125	37	5	0	0	0	0.86014	1	4784	4784		23.378	1.3024	1	5667400			55610	8437	37126	37141	62895	62895					0.1430429055399145
SRKSIPRARPR	11	Unmodified	_SRKSIPRARPR_					0	0	0		ENST00000442528.2_1_11:45825858-45825972:+|nuORF	ENST00000442528.2_1_11:45825858-45825972:+|nuORF	ENST00000442528.2_1_11:45825858-45825972:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.94012451171875	3	441.940855	1322.80073	0.33265	0.00014701	-2.7256	-0.0012046	-2.393	-0.0010575	441.9395069624772	55.282	1.2267	55.373	54.736	55.962	0.091167					101	37	4	0	0	0	0.77205	1	4556	4556		17.167	0	1	451030			55611	11793	37127	37142	62896	62896					0.1522457707101239
SRKSKRRN	8	Unmodified	_SRKSKRRN_					0	0	0		ENSG00000129167|ENST00000682019|TPH1;nc|ENSG00000129167|P17752-2|TPH1	ENSG00000129167|ENST00000682019|TPH1	ENSG00000129167|ENST00000682019|TPH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3132934570312	2	516.312681	1030.61081	0.80555	0.00041592	1.3668	0.00070572	2.1724	0.0011216	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.89043	1	10615	10615		35.618	2.8059	1	72906000			55612	3575	37128	37143	62897	62897					0.0967271012866604
SRLAARPSS	9	Unmodified	_SRLAARPSS_					0	0	0		ENST00000477778.5_1_20:32245651-32246301:-|nuORF	ENST00000477778.5_1_20:32245651-32246301:-|nuORF	ENST00000477778.5_1_20:32245651-32246301:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.76708984375	2	472.76724	943.519927	-0.5652	-0.00026721	0.45292	0.00021413	-0.11228	-5.3082E-05	472.76729274425634	81.448	2.2568	81.505	80.558	82.815	0.057816					110	51	3	0	0	0	0.7932	1	8100	8100		24.519	2.5593	1	178400			55613	12361	37129	37144	62898	62898					0.04590821360523023
SRLAREICV	9	Unmodified	_SRLAREICV_					0	0	0		ENST00000472719.5_1_2:27008929-27016144:+|nuORF;ENSG00000115163|ENST00000335756|CENPA	ENST00000472719.5_1_2:27008929-27016144:+|nuORF	ENST00000472719.5_1_2:27008929-27016144:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.7938232421875	2	523.792401	1045.57025	1.0573	0.00055378	1.9974	0.0010462	3.0546	0.0016	523.7933056592655	19.253	0.55135	19.326	19.147	19.698	0.073465					31	17	2	0	0	0	0.7932	1	378	378		26.693	2.1889	1	52025			55614	2815	37130	37145	62899	62899					0.04928607694000675
SRLASVVSR	9	Unmodified	_SRLASVVSR_					0	0	0			REV__ENST00000323534.4_2_3:152880144-152880483:+|nuORF	REV__ENST00000323534.4_2_3:152880144-152880483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.79071044921875	2	487.790715	973.566878	-0.71211	-0.00034736	0.24728	0.00012062	-0.46484	-0.00022674	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.7932	1	7778	7778		25.574	0	1	678280	+		55615	25030	37131	37146	62900	62900					0.07903680911670108
SRLCAMVEH	9	Carbamidomethyl (C)	_SRLC(Carbamidomethyl (C))AMVEH_	SRLC(1)AMVEH		SRLC(57)AMVEH		0	1	0			REV__ENST00000602712.2_1_10:45956576-46028659:-|nuORF	REV__ENST00000602712.2_1_10:45956576-46028659:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.7597045898438	2	551.760243	1101.50593	-0.67262	-0.00037112	3.8153	0.0021051	3.1427	0.001734	551.7621539159356	58.792	0.6861	58.778	58.436	59.122	-0.013729					53	23	3	0	0	0	0.41566	1	5378	5378		56.721	7.185	1	191960	+		55616	29334	37132	37147	62901	62901	354				-0.04075915454427559
SRLEEEESY	9	Unmodified	_SRLEEEESY_					0	0	0		ENST00000595671.5_1_19:57286058-57293785:-|nuORF;nc|ENSG00000269699|Q9NZV7|ZIM2;ENSG00000269699|ENST00000629319|ZIM2	ENST00000595671.5_1_19:57286058-57293785:-|nuORF	ENST00000595671.5_1_19:57286058-57293785:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.2550659179688	2	571.254025	1140.4935	0.42271	0.00024148	3.3344	0.0019048	3.7571	0.0021463	571.2557115808335	72.428	0.62173	72.978	72.647	73.269	0.55009					32	14	3	0	0	0	0.24527	1	8123	8123		69.628	6.3214	1	428750			55617	8972	37133	37148	62902	62902					-0.07112957112121876
SRLEEEESY	9	Unmodified	_SRLEEEESY_					0	0	0		ENST00000595671.5_1_19:57286058-57293785:-|nuORF;nc|ENSG00000269699|Q9NZV7|ZIM2;ENSG00000269699|ENST00000629319|ZIM2	ENST00000595671.5_1_19:57286058-57293785:-|nuORF	ENST00000595671.5_1_19:57286058-57293785:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	571.254025	1140.4935	-1.1853	-0.0006771	4.868	0.0027809	3.6827	0.0021038	571.2566956700214	72.587	0.66396	72.973	72.625	73.289	0.38581	-0.0027289	0.001107	NaN	69.628	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	404500			55618	8972	37133	37148							-0.07112957112121876
SRLEKLLTQVR	11	Unmodified	_SRLEKLLTQVR_					0	0	0		ENSG00000164304|ENST00000502583|CAGE1;nc|ENSG00000164304|Q8TC20-2|CAGE1;nc|ENSG00000164304|Q8TC20-4|CAGE1;nc|ENSG00000164304|Q8TC20|CAGE1;nc|ENSG00000164304|Q8TC20-3|CAGE1	ENSG00000164304|ENST00000502583|CAGE1	ENSG00000164304|ENST00000502583|CAGE1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	447.6070556640625	3	448.277021	1341.80923	1.4492	0.00064964	-2.7274	-0.0012226	-1.2782	-0.00057298	448.2757221762825	103.81	1.0724	103.85	103.4	104.47	0.041481					55	25	3	0	0	0	0.17784	1	11302	11302		12.433	7.7895	1	205620			55619	5949	37134	37149	62903	62903					0.15200086196955453
SRLESRSVE	9	Unmodified	_SRLESRSVE_					0	0	0			REV__ENST00000471383.5_1_2:202131194-202137540:+|nuORF	REV__ENST00000471383.5_1_2:202131194-202137540:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7822875976562	2	531.780544	1061.54654	0.46378	0.00024663	2.7383	0.0014562	3.2021	0.0017028	531.7820031077274	29.432	2.4582	29.343	28.288	30.746	-0.089544					170	57	5	0	0	0	0.66686	1	1942	1942		42.864	10.052	1	12586000	+		55620	16473	37135	37150	62904	62904					0.018224654612140512
SRLGGGRP	8	Unmodified	_SRLGGGRP_					0	0	0			REV__nc|ENSG00000102901|Q96BT3-3|CENPT	REV__nc|ENSG00000102901|Q96BT3-3|CENPT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2279968261719	2	400.230294	798.446034	-1.8752	-0.0007505	-2.6209	-0.001049	-4.4961	-0.0017995	400.22927707495484	54.825	2.6613	54.881	53.254	55.915	0.055611					132	91	2	0	0	0	0.7961	1	4562	4562		17.365	0	1	1098100	+		55621	28831	37136	37151	62905	62905					0.038748979888509893
SRLGHFIA	8	Unmodified	_SRLGHFIA_					0	0	0		ENSG00000165186|ENST00000379361|PTCHD1	ENSG00000165186|ENST00000379361|PTCHD1	ENSG00000165186|ENST00000379361|PTCHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7543029785156	2	450.756144	899.497735	-1.264	-0.00056978	-3.0711	-0.0013843	-4.3351	-0.0019541	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.86288	1	7571	7571		26.796	2.5934	1	414240			55622	6057	37137	37152	62906	62906					0.0439664168274021
SRLGHLAR	8	Unmodified	_SRLGHLAR_					0	0	0		ENST00000391859.6_1_19:49841166-49843582:+|nuORF;nc|ENSG00000104894|P11049-3|CD37;nc|ENSG00000104894|P11049-2|CD37;ENSG00000104894|ENST00000323906|CD37	ENST00000391859.6_1_19:49841166-49843582:+|nuORF	ENST00000391859.6_1_19:49841166-49843582:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.252197265625	2	455.272493	908.530432	0.25969	0.00011823	-1.8733	-0.00085284	-1.6136	-0.00073462	455.2726929163117	29.996	0.25533	29.906	29.749	30.004	-0.089544					8	5	2	0	0	0	0.4196	1	1955	1955		23.042	10.083	1	23761			55623	2164	37138	37153	62907	62907					0.07250848805608712
SRLGHLAR	8	Unmodified	_SRLGHLAR_					0	0	0		ENST00000391859.6_1_19:49841166-49843582:+|nuORF;nc|ENSG00000104894|P11049-3|CD37;nc|ENSG00000104894|P11049-2|CD37;ENSG00000104894|ENST00000323906|CD37	ENST00000391859.6_1_19:49841166-49843582:+|nuORF	ENST00000391859.6_1_19:49841166-49843582:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	455.272493	908.530432	0.31063	0.00014142	3.7519	0.0017081	4.0625	0.0018496	455.2750053498196	29.779	0.093117	29.79	29.729	29.822	0.01123	-0.05836	0.00017858	NaN	16.473	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16571			55624	2164	37138	37153							0.07250848805608712
SRLGRGRLP	9	Unmodified	_SRLGRGRLP_					0	0	0			REV__ENSG00000102897|ENST00000567954|LYRM1	REV__ENSG00000102897|ENST00000567954|LYRM1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3119201660156	2	506.312149	1010.60975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.976	1	64.006	63.506	64.506	0.030247								0	0	0	0.32758	1	5617	5617		20.947	1.587	1		+		55625	17369	37139	37154	62908	62908					0.1048649575974423
SRLHFITF	8	Unmodified	_SRLHFITF_					0	0	0			REV__nc|ENSG00000119397|Q7Z7A1-5|CNTRL	REV__nc|ENSG00000119397|Q7Z7A1-5|CNTRL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.7820739746094	2	510.784902	1019.55525	0.091613	4.6794E-05	-4.1923	-0.0021414	-4.1007	-0.0020946	510.7826138521108	26.501	0.82938	26.469	26.1	26.929	-0.032127					35	17	3	0	0	0	0.87064	1	1156	1156		29.15	2.3535	1	143900	+		55626	18351	37140	37155	62909	62909					0.04625483888321469
SRLHLTLSSVR	11	Unmodified	_SRLHLTLSSVR_					0	0	0			REV__ENSG00000254004|ENST00000523638|ZNF260	REV__ENSG00000254004|ENST00000523638|ZNF260	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8765869140625	2	634.875311	1267.73607	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.92	1	115.88	115.38	116.38	-0.037872								0	0	0	0.56276	1	13926	13926		18.262	0.79408	1		+		55627	23885	37141	37156	62910	62910					0.11290957474375318
SRLIFHHL	8	Unmodified	_SRLIFHHL_					0	0	0		ENSG00000255837|ENST00000538986|TAS2R20	ENSG00000255837|ENST00000538986|TAS2R20	ENSG00000255837|ENST00000538986|TAS2R20	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.2970886230469	2	511.798343	1021.58213	0.79999	0.00040943	1.097	0.00056144	1.897	0.00097088	511.79882149219844	16.628	0.34702	16.019	15.868	16.215	-0.60848					10	7	2	0	0	0	0.4196	1	167	167		31.955	0	1	81115			55628	8891	37142	37157	62911	62911					0.07220592499515988
SRLILVYSLFI	11	Unmodified	_SRLILVYSLFI_					0	0	0			REV__ENSG00000187918|ENST00000641930|OR51I2	REV__ENSG00000187918|ENST00000641930|OR51I2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.93951416015625	3	441.939346	1322.79621	-1.4755	-0.00065207	2.5532	0.0011283	1.0777	0.00047628	441.9403125343586	55.224	1.199	55.287	54.704	55.903	0.063725					106	39	3	0	0	0	0.75121	1	4632	4632		21.78	1.75	1	485540	+		55629	22962	37143	37158	62912	62912					0.1477225508488118
SRLIPPGP	8	Unmodified	_SRLIPPGP_					0	0	0			REV__ENST00000273814.7_1_4:953005-953860:-|nuORF	REV__ENST00000273814.7_1_4:953005-953860:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.76434326171875	2	418.75307	835.491587	1.046	0.00043803	-0.28475	-0.00011924	0.76128	0.00031879	418.7530361220563	33.174	0.25293	33.385	33.271	33.524	0.21168					8	5	2	0	0	0	0.4196	1	2402	2402		37.159	0	1	57074	+		55630	24559	37144	37159	62913	62913					0.06726123451232979
SRLKFKIC	8	Unmodified	_SRLKFKIC_					0	0	0		ENST00000463223.1_1_9:115247655-115248798:-|nuORF	ENST00000463223.1_1_9:115247655-115248798:-|nuORF	ENST00000463223.1_1_9:115247655-115248798:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.7955627441406	2	497.796955	993.579357	0.32848	0.00016352	-2.5498	-0.0012693	-2.2214	-0.0011058	497.7954109844358	48.391	0.87605	48.429	47.96	48.836	0.037731					54	21	3	0	0	0	0.8347	1	3665	3665		23.042	0.0057756	1	407880			55631	12059	37145	37160	62914	62914					0.08231001050342002
SRLKLCVL	8	Unmodified	_SRLKLCVL_					0	0	0		ENSG00000204442|ENST00000375915|NALF1	ENSG00000204442|ENST00000375915|NALF1	ENSG00000204442|ENST00000375915|NALF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.28924560546875	2	466.291505	930.568457	-0.6411	-0.00029894	-2.9701	-0.0013849	-3.6112	-0.0016839	466.28999408550436	73.948	1.2575	73.992	73.721	74.978	0.043648					98	48	3	0	0	0	0.83456	1	7145	7145		60.972	3.1607	1	991630			55632	8443	37146	37161	62915	62915					0.10039598676064543
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.97320556640625	3	478.975788	1433.90553	-1.7043	-0.00081634	-1.7797	-0.00085244	-3.484	-0.0016688	478.9749318699197	42.97	1.9218	42.97	41.976	43.898	0					105	47	4	0	0	0	0.74771	1	3097	3097		22.562	11.107	1	335660			55633	3753	37147	37162	62916	62916					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9752502441406	3	478.975788	1433.90553	-1.6535	-0.00079198	-1.1033	-0.00052846	-2.7568	-0.0013204	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.77803	2	3557	3443;3557		15.921	5.8168	1	252010			55634	3753	37147	37162	62917;62918	62918					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3085021972656	3	478.975788	1433.90553	-1.6306	-0.00078103	-0.71327	-0.00034164	-2.3439	-0.0011227	478.97540943407233	47.987	1.2617	47.987	47.56	48.821	0					77	38	3	0	0	0	0.78607	2	3733	3722;3733		14.243	1.3452	1	195490			55635	3753	37147	37162	62919;62920	62920					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9754638671875	3	478.975788	1433.90553	0.1614	7.7307E-05	-2.9471	-0.0014116	-2.7857	-0.0013343	478.974258997061	46.621	1.762	46.607	45.625	47.387	-0.013821					99	45	3	0	0	0	0.81124	1	3745	3745		8.9961	1.3167	1	179760			55636	3753	37147	37162	62921	62921					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3087158203125	3	478.975788	1433.90553	0.065395	3.1322E-05	-2.7829	-0.001333	-2.7175	-0.0013016	478.9743761165068	49.154	1.8702	49.148	48.387	50.257	-0.0056381					110	43	3	0	0	0	0.78351	1	4049	4049		14.779	1.8213	1	187140			55637	3753	37147	37162	62922	62922					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3097229003906	3	478.975788	1433.90553	0.006833	3.2729E-06	-2.5965	-0.0012437	-2.5897	-0.0012404	478.9744559828599	50.975	1.3531	50.973	50.261	51.614	-0.0020447					59	37	2	0	0	0	0.81892	1	4338	4338		8.0344	1.7135	1	175970			55638	3753	37147	37162	62923	62923					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.3088684082031	3	478.975788	1433.90553	-1.0377	-0.00049701	-2.8379	-0.0013593	-3.8755	-0.0018563	478.97440370036395	43.258	1.9554	43.222	42.189	44.144	-0.035816					117	46	4	0	0	0	0.82431	1	3433	3433		7.6794	1.6784	1	472330			55639	3753	37147	37162	62924	62924					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9740905761719	3	478.975788	1433.90553	-0.69273	-0.0003318	-2.0219	-0.00096845	-2.7146	-0.0013002	478.9746813820608	49.583	2.3312	49.559	48.401	50.732	-0.024033					111	53	3	0	0	0	0.78083	2	4185	4185;4264		15.337	1.2515	1	142150			55640	3753	37147	37162	62925;62926	62925					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9751892089844	3	478.975788	1433.90553	-1.9678	-0.00094254	-1.893	-0.00090669	-3.8608	-0.0018492	479.30912300096907	43.377	1.5252	43.377	42.724	44.249	0.00016785					100	36	3	0	0	0	0.77803	1	3413	3413		15.921	2.9632	1	374940			55641	3753	37147	37162	62927	62927					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9743347167969	3	478.975788	1433.90553	-1.3068	-0.00062591	-1.2424	-0.00059507	-2.5492	-0.001221	478.9750986281663	49.151	3.7005	49.151	47.803	51.503	0.00016785					187	96	3	0	0	0	0.76942	1	4435	4435		17.722	3.6355	1	240410			55642	3753	37147	37162	62928	62928					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.97515869140625	3	478.975788	1433.90553	-1.444	-0.00069165	-1.1922	-0.00057106	-2.6363	-0.0012627	478.9751239612837	53.894	1.3907	53.916	52.877	54.267	0.022537					94	38	3	0	0	0	0.80574	1	4698	4698		10.145	0.93273	1	147820			55643	3753	37147	37162	62929	62929					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97381591796875	3	478.975788	1433.90553	-0.91416	-0.00043786	-2.4354	-0.0011665	-3.3496	-0.0016044	478.9746832148069	43.078	1.9449	43.084	42.148	44.093	0.0057487					98	52	3	0	0	0	0.80164	1	2951	2951		10.998	2.1989	1	330000			55644	3753	37147	37162	62930	62930					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9758605957031	3	478.975788	1433.90553	-0.90815	-0.00043498	-1.7541	-0.00084019	-2.6623	-0.0012752	478.9748582925552	46.465	1.8766	46.48	45.355	47.231	0.015514					99	51	3	0	0	0	0.78854	1	3442	3442		13.73	0.22158	1	368580			55645	3753	37147	37162	62931	62931					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.972900390625	3	478.975788	1433.90553	-0.90026	-0.0004312	-1.5139	-0.0007251	-2.4141	-0.0011563	479.3094231457841	50.589	1.3321	50.619	49.948	51.28	0.029629					91	40	3	0	0	0	0.79716	1	3971	3971		11.932	1.8285	1	250790			55646	3753	37147	37162	62932	62932					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9757080078125	3	478.975788	1433.90553	-0.89818	-0.00043021	-1.4459	-0.00069257	-2.3441	-0.0011228	478.9750533889841	51.817	1.8474	51.852	50.982	52.829	0.034588					134	56	3	0	0	0	0.78351	1	4147	4147		14.779	4.2169	1	276750			55647	3753	37147	37162	62933	62933					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.974365234375	3	478.975788	1433.90553	-0.89559	-0.00042897	-1.9548	-0.00093631	-2.8504	-0.0013653	478.97476873083025	53.212	1.4583	53.26	52.506	53.964	0.047806					86	49	3	0	0	0	0.76087	1	4370	4370		19.627	4.8481	1	231950			55648	3753	37147	37162	62934	62934					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97528076171875	3	478.975788	1433.90553	0.41435	0.00019846	-3.1102	-0.0014897	-2.6958	-0.0012912	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.81892	1	5167	5167		8.0344	0.69301	1	131420			55649	3753	37147	37162	62935	62935					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9747009277344	3	478.975788	1433.90553	-0.14296	-6.8476E-05	-2.941	-0.0014087	-3.0839	-0.0014771	479.30852632834683	44.585	1.4147	44.527	43.913	45.328	-0.058262					107	33	5	0	0	0	0.82945	1	3118	3118		7.3413	1.3403	1	811560			55650	3753	37147	37162	62936	62936					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30859375	3	478.975788	1433.90553	-0.20548	-9.8418E-05	-2.506	-0.0012003	-2.7115	-0.0012987	479.3089270903947	46.481	2.0446	46.402	45.307	47.352	-0.079002					150	58	3	0	0	0	0.82945	1	3431	3431		7.3413	1.0205	1	468190			55651	3753	37147	37162	62937	62937					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97711181640625	3	478.975788	1433.90553	-0.25402	-0.00012167	-2.023	-0.00096899	-2.2771	-0.0010907	478.9747709878051	47.62	1.4426	47.532	47.242	48.685	-0.087646					53	40	2	0	0	0	0.7722	1	3573	3573		17.135	5.2022	1	370120			55652	3753	37147	37162	62938	62938					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3085632324219	3	478.975788	1433.90553	-0.315	-0.00015088	-2.2657	-0.0010852	-2.5807	-0.0012361	478.9746652956354	49.514	1.8124	49.42	48.44	50.252	-0.093178					109	43	3	0	0	0	0.77803	2	3845	3810;3845		15.921	6.2745	1	294110			55653	3753	37147	37162	62939;62940	62940					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9751892089844	3	478.975788	1433.90553	-0.41434	-0.00019846	-1.9974	-0.00095669	-2.4117	-0.0011551	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.81892	1	4183	4183		8.0344	2.3356	1	341610			55654	3753	37147	37162	62941	62941					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.97479248046875	3	478.975788	1433.90553	-0.64689	-0.00030985	-1.384	-0.00066289	-2.0309	-0.00097274	478.9749929627301	58.599	1.6691	58.591	58.082	59.751	-0.0074387					98	61	3	0	0	0	0.79945	1	5128	5128		11.455	2.6553	1	163840			55655	3753	37147	37162	62942	62942					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9710998535156	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.379	1	67.431	66.931	67.931	0.052368								0	0	0	0.56276	1	6000	6000		17.833	4.8757	1				55656	3753	37147	37162	62943	62943					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.75860595703125	3	478.975788	1433.90553	-0.064363	-3.0828E-05	-2.6842	-0.0012857	-2.7486	-0.0013165	478.9744344107	45.389	1.9075	45.853	45.145	47.053	0.46313					94	46	3	0	0	0	0.181	1	4240	4240		4.4131	1.7251	1	332520			55657	3753	37147	37162	62944	62944					0.2059369854760007
SRLKLLRRHQK	11	Unmodified	_SRLKLLRRHQK_					0	0	0		nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A;ENSG00000131848|ENST00000683990|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	478.975788	1433.90553	-1.5783	-0.00075598	-1.1553	-0.00055336	-2.7336	-0.0013093	478.975098456599	44.932	1.2578	45.776	45.419	46.677	0.84438	-0.038274	0.0012506	NaN	6.712	71	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	495900			55658	3753	37147	37162							0.2059369854760007
SRLKMIIYFAF	11	Unmodified	_SRLKMIIYFAF_					0	0	0			REV__ENSG00000149577|ENST00000324225|SIDT2	REV__ENSG00000149577|ENST00000324225|SIDT2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8015441894531	3	463.596814	1387.76861	-0.66692	-0.00030918	-0.36983	-0.00017145	-1.0368	-0.00048064	463.5965725945709	45.326	0.4341	45.322	45.1	45.534	-0.0041618					15	9	2	0	0	0	0.17586	1	3609	3609		21.78	0	1	71164	+		55659	20181	37148	37163	62945	62945					0.09024028552994423
SRLKPFHLRGV	11	Unmodified	_SRLKPFHLRGV_					0	0	0			REV__nc|ENSG00000237864|Q6ZN03|LINC00322	REV__nc|ENSG00000237864|Q6ZN03|LINC00322	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2649841308594	3	437.266568	1308.77787	0.94784	0.00041446	3.1201	0.0013643	4.0679	0.0017788	437.6021157281718	55.109	0.32409	55.136	54.92	55.244	0.027142					11	7	2	0	0	0	0.69687	1	4912	4912		32.034	9.4725	1	286510	+		55660	30229	37149	37164	62946	62946					0.13583557953506897
SRLKPFHLRGV	11	Unmodified	_SRLKPFHLRGV_					0	0	0			REV__nc|ENSG00000237864|Q6ZN03|LINC00322	REV__nc|ENSG00000237864|Q6ZN03|LINC00322	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	437.266568	1308.77787	0.16771	7.3336E-05	3.6398	0.0015916	3.8076	0.0016649	437.26800943121185	54.719	0.50371	55.126	54.907	55.411	0.40663	-0.0053005	0.00040458	NaN	32.034	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98642	+		55661	30229	37149	37164							0.13583557953506897
SRLKPYSYL	9	Unmodified	_SRLKPYSYL_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	563.3280639648438	2	563.816399	1125.61824	-0.60465	-0.00034091	2.1685	0.0012226	1.5639	0.00088173	563.8177635773875	58.753	0.70741	59.145	58.693	59.401	0.39209					26	16	2	0	0	0	0.20789	1	6177	6177		36.447	6.129	1	230570	+		55662	23025	37150	37165	62947	62947					0.060460048857066795
SRLKVLAKH	9	Unmodified	_SRLKVLAKH_					0	0	0			REV__nc|ENSG00000149782|Q01970-2|PLCB3	REV__nc|ENSG00000149782|Q01970-2|PLCB3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3609619140625	2	526.340375	1050.6662	0.0063046	3.3184E-06	4.478	0.0023569	4.4843	0.0023602	526.3428445612357	33.333	0.45385	33.331	33.17	33.624	-0.0016365					15	9	2	0	0	0	0.20789	1	1957	1957		34.173	0	1	39522	+		55663	20194	37151	37166	62948	62948					0.14289123596404352
SRLLDLIT	8	Unmodified	_SRLLDLIT_					0	0	0		ENSG00000050165|ENST00000683431|DKK3	ENSG00000050165|ENST00000683431|DKK3	ENSG00000050165|ENST00000683431|DKK3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2530822753906	2	465.784567	929.554582	-0.12023	-5.5999E-05	-3.3024	-0.0015382	-3.4227	-0.0015942	465.7816555417319	62.916	0.098679	62.911	62.866	62.965	-0.0055504					5	3	2	0	0	0	0.4196	1	5847	5847		11.511	3.8207	1	30047			55664	992	37152	37167	62949	62949					0.08698644448600135
SRLLKRSCF	9	Unmodified	_SRLLKRSCF_					0	0	0		ENST00000467136.5_1_X:30885615-30889821:-|nuORF	ENST00000467136.5_1_X:30885615-30889821:-|nuORF	ENST00000467136.5_1_X:30885615-30889821:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	556.2957763671875	2	555.316043	1108.61753	-0.75683	-0.00042028	-1.8531	-0.0010291	-2.6099	-0.0014493	555.3151883451626	68.899	0.082741	68.965	68.894	68.976	0.065506					4	2	2	0	0	0	0.20789	1	6200	6200		27.882	0	1	54979			55665	12147	37153	37168	62950	62950					0.06756886965013109
SRLLLGLPRPL	11	Unmodified	_SRLLLGLPRPL_					0	0	0		nc|ENSG00000177398|Q5DID0-3|UMODL1;ENSG00000177398|ENST00000408910|UMODL1;nc|ENSG00000177398|Q5DID0-4|UMODL1;nc|ENSG00000177398|Q5DID0-2|UMODL1	nc|ENSG00000177398|Q5DID0-3|UMODL1	nc|ENSG00000177398|Q5DID0-3|UMODL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7666015625	3	412.271319	1233.79213	0.26108	0.00010763	4.1957	0.0017298	4.4568	0.0018374	412.2729233071268	48.091	1.1253	48.128	47.914	49.039	0.037731					65	28	3	0	0	0	0.17729	1	3717	3717		8.7993	0	1	150160			55666	7137	37154	37169	62951	62951					0.18458210381845674
SRLLPAPPFPL	11	Unmodified	_SRLLPAPPFPL_					0	0	0			REV__ENST00000442418.5_1_1:95197885-95207872:-|nuORF	REV__ENST00000442418.5_1_1:95197885-95207872:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3681640625	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.46	1	117.43	116.93	117.93	-0.02433								0	0	0	0.56276	1	13001	13001		5.2201	0	1		+		55667	26770	37155	37170	62952	62952					0.11739143707836774
SRLLPRALVRA	11	Unmodified	_SRLLPRALVRA_					0	0	0		ENST00000556440.6_2_17:62503037-62503232:+|nuORF	ENST00000556440.6_2_17:62503037-62503232:+|nuORF	ENST00000556440.6_2_17:62503037-62503232:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3796997070312	2	626.404038	1250.79352	1.3716	0.00085918	-4.4264	-0.0027727	-3.0548	-0.0019136	626.401648329797	106.18	0.55992	106.33	106.22	106.78	0.14842					16	12	2	0	0	0	0.17714	1	11401	11401		19.104	0	1	49969			55668	13746	37156	37171	62953	62953					0.17815844470601405
SRLLRATSL	9	Unmodified	_SRLLRATSL_					0	0	0			REV__ENST00000374454.1_1_X:69507170-69507616:-|nuORF	REV__ENST00000374454.1_1_X:69507170-69507616:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8172607421875	2	508.81419	1015.61383	-0.63775	-0.0003245	1.2358	0.0006288	0.59806	0.0003043	508.81487501461754	43.667	3.2315	44.117	43.686	46.917	0.45025					183	79	5	0	0	0	0.19818	1	3933	3933		74.255	0.28031	1	105110000	+		55669	25787	37157	37172	62954	62954					0.1066454046281251
SRLLRVRP	8	Unmodified	_SRLLRVRP_					0	0	0			REV__ENST00000536411.1_1_12:6483977-6484974:-|nuORF	REV__ENST00000536411.1_1_12:6483977-6484974:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.82647705078125	2	498.824892	995.635232	0.14101	7.0337E-05	2.1153	0.0010552	2.2563	0.0011255	498.8258184958068	67.735	1.3923	68.119	67.633	69.025	0.38483					74	33	3	0	0	0	0.36734	3	7439	7412;7439;7468		99.375	0	1	716250	+		55670	28406	37158	37173	62955;62956;62957	62956					0.13723970282183018
SRLLRVRP	8	Unmodified	_SRLLRVRP_					0	0	0			REV__ENST00000536411.1_1_12:6483977-6484974:-|nuORF	REV__ENST00000536411.1_1_12:6483977-6484974:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.8258361816406	2	498.824892	995.635232	-0.16999	-8.4797E-05	2.5973	0.0012956	2.4273	0.0012108	498.8260843252735	67.629	1.4239	68.177	67.689	69.113	0.54819					71	33	3	0	0	0	0.36517	6	7409	7409;7419;7431;7445;7455;7467		99.375	0	1	799870	+		55671	28406	37158	37173	62958;62959;62960;62961;62962;62963	62958					0.13723970282183018
SRLMPCKMIY	10	Unmodified	_SRLMPCKMIY_					0	0	0			REV__ENSG00000175262|ENST00000377004|C1orf127	REV__ENSG00000175262|ENST00000377004|C1orf127	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3131713867188	2	621.313797	1240.61304	-0.2911	-0.00018087	0.33264	0.00020667	0.041538	2.5808E-05	621.3138090299801	68.828	0.73877	68.854	68.562	69.301	0.02636					77	31	4	0	0	0	0.80179	1	6489	6489		39.253	1.4413	1	456890	+		55672	22053	37159	37174	62964	62964					0.0023591843557824177
SRLPCQILL	9	Unmodified	_SRLPCQILL_					0	0	0			REV__ENST00000518462.1_1_7:150066506-150066689:+|nuORF	REV__ENST00000518462.1_1_7:150066506-150066689:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.8063354492188	2	521.807519	1041.60049	-0.93882	-0.00048988	-1.7126	-0.00089362	-2.6514	-0.0013835	521.8064230689948	44.681	1.2973	45.525	44.82	46.118	0.84438					61	31	3	0	0	0	0.69624	1	4156	4156		40.778	2.9666	1	1040200	+		55673	28064	37160	37175	62965	62965					0.08134966359216378
SRLPDLGSD	9	Unmodified	_SRLPDLGSD_					0	0	0		nc|ENSG00000067141|Q92859-4|NEO1;ENSG00000067141|ENST00000261908|NEO1;nc|ENSG00000067141|Q92859-3|NEO1;nc|ENSG00000067141|Q92859-2|NEO1	nc|ENSG00000067141|Q92859-4|NEO1	nc|ENSG00000067141|Q92859-4|NEO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.75860595703125	2	480.243264	958.471974	-0.13902	-6.6761E-05	3.804	0.0018269	3.665	0.0017601	480.24504495842456	45.517	0.32468	45.988	45.807	46.132	0.47139					13	7	2	0	0	0	0.20789	1	4240	4240		26.693	0	1	257910			55674	1176	37161	37176	62966	62966					-0.008922973501739762
SRLPKRVT	8	Unmodified	_SRLPKRVT_					0	0	0			REV__ENST00000564068.1_1_15:75628478-75628964:+|nuORF	REV__ENST00000564068.1_1_15:75628478-75628964:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8043518066406	2	478.803626	955.592698	-1.2382	-0.00059286	4.3011	0.0020594	3.0629	0.0014665	478.80558529591235	40.624	1.0284	40.581	39.923	40.951	-0.042892					45	26	2	0	0	0	0.87479	1	3029	3029		30.504	4.9296	1	267990	+		55675	28830	37162	37177	62967	62967					0.11312575153931448
SRLQLGGLG	9	Unmodified	_SRLQLGGLG_					0	0	0			REV__ENST00000548477.5_1_12:113758134-113758563:-|nuORF	REV__ENST00000548477.5_1_12:113758134-113758563:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.75830078125	2	450.766709	899.518865	0.88047	0.00039689	-1.1594	-0.00052261	-0.27891	-0.00012573	450.7660426602437	28.114	0.87881	28.091	27.56	28.439	-0.023556					32	20	2	0	0	0	0.20789	1	1296	1296		16.473	0.83134	1	37151	+		55676	28572	37163	37178	62968	62968					0.06508606991621946
SRLQRDIRREI	11	Unmodified	_SRLQRDIRREI_					0	0	0		ENSG00000151148|ENST00000342494|UBE3B;nc|ENSG00000151148|Q7Z3V4-3|UBE3B;nc|ENSG00000151148|Q7Z3V4-2|UBE3B;ENST00000539843.5_1_12:109921338-109921795:+|nuORF	ENSG00000151148|ENST00000342494|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.2829284667969	3	481.283057	1440.82734	-0.094123	-4.53E-05	0.1624	7.816E-05	0.068276	3.286E-05	481.28309921299575	101.72	1.6724	101.74	100.69	102.36	0.01989					105	39	3	0	0	0	0.72374	1	10866	10866		27.644	5.0823	1	543600			55677	5097	37164	37179	62969	62969					0.1245622117169205
SRLQRDIRREI	11	Unmodified	_SRLQRDIRREI_					0	0	0		ENSG00000151148|ENST00000342494|UBE3B;nc|ENSG00000151148|Q7Z3V4-3|UBE3B;nc|ENSG00000151148|Q7Z3V4-2|UBE3B;ENST00000539843.5_1_12:109921338-109921795:+|nuORF	ENSG00000151148|ENST00000342494|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.2825012207031	3	481.283057	1440.82734	-0.094059	-4.5269E-05	0.1066	5.1307E-05	0.012545	6.0375E-06	481.2824632956746	102.92	3.58	102.92	102.27	105.85	0.0082092					167	86	3	0	0	0	0.75121	1	11083	11083		21.78	5.8598	1	832110			55678	5097	37164	37179	62970	62970					0.1245622117169205
SRLQRDIRREI	11	Unmodified	_SRLQRDIRREI_					0	0	0		ENSG00000151148|ENST00000342494|UBE3B;nc|ENSG00000151148|Q7Z3V4-3|UBE3B;nc|ENSG00000151148|Q7Z3V4-2|UBE3B;ENST00000539843.5_1_12:109921338-109921795:+|nuORF	ENSG00000151148|ENST00000342494|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.2820129394531	3	481.283057	1440.82734	2.7369	0.0013172	-2.6567	-0.0012786	0.080195	3.8596E-05	481.2817189970154	101.62	1.8989	101.57	100.36	102.26	-0.049828					113	44	3	0	0	0	0.74405	1	11070	11070		23.378	1.5975	1	536510			55679	5097	37164	37179	62971	62971					0.1245622117169205
SRLQRDIRREI	11	Unmodified	_SRLQRDIRREI_					0	0	0		ENSG00000151148|ENST00000342494|UBE3B;nc|ENSG00000151148|Q7Z3V4-3|UBE3B;nc|ENSG00000151148|Q7Z3V4-2|UBE3B;ENST00000539843.5_1_12:109921338-109921795:+|nuORF	ENSG00000151148|ENST00000342494|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.6177673339844	3	481.283057	1440.82734	2.8229	0.0013586	-0.83525	-0.00040199	1.9876	0.00095662	481.2820387831268	102.84	2.0906	102.8	102.18	104.27	-0.047005					125	50	4	0	0	0	0.67041	1	11292	11292		36.318	3.5671	1	829310			55680	5097	37164	37179	62972	62972					0.1245622117169205
SRLQRDIRREI	11	Unmodified	_SRLQRDIRREI_					0	0	0		ENSG00000151148|ENST00000342494|UBE3B;nc|ENSG00000151148|Q7Z3V4-3|UBE3B;nc|ENSG00000151148|Q7Z3V4-2|UBE3B;ENST00000539843.5_1_12:109921338-109921795:+|nuORF	ENSG00000151148|ENST00000342494|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.28326416015625	3	481.283057	1440.82734	-0.7743	-0.00037266	1.518	0.0007306	0.74373	0.00035795	481.2837549542837	102.74	2.1503	102.93	102.14	104.29	0.19484					128	53	4	0	0	0	0.76892	1	10802	10802		17.833	2.4957	1	1226400			55681	5097	37164	37179	62973	62973					0.1245622117169205
SRLQRDIRREI	11	Unmodified	_SRLQRDIRREI_					0	0	0		ENSG00000151148|ENST00000342494|UBE3B;nc|ENSG00000151148|Q7Z3V4-3|UBE3B;nc|ENSG00000151148|Q7Z3V4-2|UBE3B;ENST00000539843.5_1_12:109921338-109921795:+|nuORF	ENSG00000151148|ENST00000342494|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	481.283057	1440.82734	2.1351	0.0010276	-1.525	-0.00073395	0.61006	0.00029361	481.2822763038359	102.56	1.3636	102.8	101.58	102.94	0.23873	-0.076019	-0.0032767	NaN	36.318	77	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	829900			55682	5097	37164	37179							0.1245622117169205
SRLQRDIRREI	11	Unmodified	_SRLQRDIRREI_					0	0	0		ENSG00000151148|ENST00000342494|UBE3B;nc|ENSG00000151148|Q7Z3V4-3|UBE3B;nc|ENSG00000151148|Q7Z3V4-2|UBE3B;ENST00000539843.5_1_12:109921338-109921795:+|nuORF	ENSG00000151148|ENST00000342494|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	481.283057	1440.82734	2.2794	0.001097	-1.4137	-0.0006804	0.86569	0.00041664	481.2823578526314	102.55	1.1831	102.85	101.87	103.05	0.29864	-0.025254	-0.003116	NaN	36.318	80	28	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	879120			55683	5097	37164	37179							0.1245622117169205
SRLRLALL	8	Unmodified	_SRLRLALL_					0	0	0		CON__P02777	CON__P02777	CON__P02777	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2699890136719	2	471.316369	940.618185	-0.59917	-0.0002824	1.9302	0.00090973	1.331	0.00062733	471.31722024766157	62.59	0.82081	63.144	62.777	63.598	0.55449					39	18	3	0	0	0	0.4196	1	6689	6689		37.159	0	1	187680		+	55684	585	37165	37180	62974	62974					0.14550049676358867
SRLSAPRGT	9	Unmodified	_SRLSAPRGT_					0	0	0		ENST00000526623.2_1_11:64948241-64949272:-|nuORF	ENST00000526623.2_1_11:64948241-64949272:-|nuORF	ENST00000526623.2_1_11:64948241-64949272:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7670593261719	2	472.76724	943.519927	-1.568	-0.00074129	1.5546	0.00073498	-0.013349	-6.3108E-06	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.66686	1	8153	8153		42.864	0.38981	1	404330			55685	13264	37166	37181	62975	62975					0.045908213605116543
SRLSIFIC	8	Unmodified	_SRLSIFIC_					0	0	0		ENST00000521942.5_1_5:70343758-70344025:-|nuORF	ENST00000521942.5_1_5:70343758-70344025:-|nuORF	ENST00000521942.5_1_5:70343758-70344025:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.7596130371094	2	469.760038	937.505523	-0.023436	-1.1009E-05	0.93738	0.00044034	0.91394	0.00042933	469.76032512029695	40.348	1.0077	40.3	40.046	41.054	-0.04789					61	38	2	0	0	0	0.92973	1	2551	2551		50.025	2.1089	1	392540			55686	13179	37167	37182	62976	62976					0.034270328879983936
SRLSRVSH	8	Unmodified	_SRLSRVSH_					0	0	0			REV__ENST00000531443.5_1_8:107754486-107758071:+|nuORF	REV__ENST00000531443.5_1_8:107754486-107758071:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.26947021484375	2	471.267407	940.520262	-0.81567	-0.0003844	3.6943	0.001741	2.8786	0.0013566	471.26905540525263	62.415	1.1287	62.803	62.273	63.402	0.388					44	25	2	0	0	0	0.92394	1	6672	6672		47.657	5.2612	1	271510	+		55687	28301	37168	37183	62977	62977					0.04762241080379681
SRLTERLRK	9	Unmodified	_SRLTERLRK_					0	0	0		nc|ENSG00000155256|Q5T4F4-4|ZFYVE27;nc|ENSG00000155256|Q5T4F4-6|ZFYVE27;nc|ENSG00000155256|Q5T4F4-7|ZFYVE27;nc|ENSG00000155256|Q5T4F4-5|ZFYVE27;nc|ENSG00000155256|Q5T4F4-8|ZFYVE27;nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;ENSG00000155256|ENST00000684270|ZFYVE27;nc|ENSG00000155256|Q5T4F4-3|ZFYVE27	nc|ENSG00000155256|Q5T4F4-4|ZFYVE27	nc|ENSG00000155256|Q5T4F4-4|ZFYVE27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	579.8583374023438	2	579.856921	1157.69929	-0.70328	-0.0004078	3.1424	0.0018222	2.4391	0.0014144	579.8584483798292	73.98	0.55647	74.539	74.283	74.84	0.55891					27	12	3	0	0	0	0.73802	1	8356	8356		37.812	0.65241	1	410990			55688	5318	37169	37184	62978	62978					0.12674705648441886
SRLVRLNTPIN	11	Unmodified	_SRLVRLNTPIN_					0	0	0			REV__ENSG00000171564|ENST00000302068|FGB	REV__ENSG00000171564|ENST00000302068|FGB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8836059570312	2	641.883136	1281.75172	-0.076643	-4.9196E-05	-0.91063	-0.00058452	-0.98727	-0.00063371	641.8824265545632	96.25	1.6726	96.25	95.357	97.03	0					110	38	3	0	0	0	0.67778	1	9698	9698		35.152	1.2304	1	839370	+		55689	21750	37170	37185	62979	62979					0.12211243991418996
SRLVRLNTPIN	11	Unmodified	_SRLVRLNTPIN_					0	0	0			REV__ENSG00000171564|ENST00000302068|FGB	REV__ENSG00000171564|ENST00000302068|FGB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8828125	2	641.883136	1281.75172	1.4722	0.00094496	-2.5524	-0.0016383	-1.0802	-0.00069336	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.77762	1	11610	11610		16.007	0.36496	1	4511200	+		55690	21750	37170	37185	62980	62980					0.12211243991418996
SRLVVRNS	8	Unmodified	_SRLVVRNS_					0	0	0			REV__ENSG00000076201|ENST00000265562|PTPN23	REV__ENSG00000076201|ENST00000265562|PTPN23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.77764892578125	2	465.777608	929.540663	-0.25577	-0.00011913	0.16818	7.8335E-05	-0.08759	-4.0797E-05	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.87792	1	7952	7952		31.53	3.6476	1	451640	+		55691	16723	37171	37186	62981	62981					0.07307411740180214
SRLWLTYRRDF	11	Unmodified	_SRLWLTYRRDF_					0	0	0		ENST00000590096.1_1_19:10654706-10657792:+|nuORF;ENSG00000130734|ENST00000309469|ATG4D	ENST00000590096.1_1_19:10654706-10657792:+|nuORF	ENST00000590096.1_1_19:10654706-10657792:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.2733154296875	3	504.94052	1511.79973	-0.50503	-0.00025501	-4.4229	-0.0022333	-4.928	-0.0024883	504.93822048751315	56.717	0.75676	56.789	56.58	57.336	0.071835					73	35	3	0	0	0	0.7896	1	4783	4783		13.508	0.55046	1	653270			55692	3674	37172	37187	62982	62982					0.06430317911440397
SRMASRAR	8	Unmodified	_SRMASRAR_					0	0	0		ENST00000561916.2_1_16:31213940-31214408:+|nuORF	ENST00000561916.2_1_16:31213940-31214408:+|nuORF	ENST00000561916.2_1_16:31213940-31214408:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2906494140625	2	467.75361	933.492667	0.10827	5.0644E-05	2.8705	0.0013427	2.9787	0.0013933	467.7548028923695	33.251	0.50808	33.421	33.187	33.695	0.16971					17	11	2	0	0	0	0.4196	1	2372	2372		23.042	0	1	123230			55693	13842	37173	37188	62983	62983					0.0232601454848691
SRMEHQLGH	9	Unmodified	_SRMEHQLGH_					0	0	0		ENSG00000184895|ENST00000383070|SRY	ENSG00000184895|ENST00000383070|SRY	ENSG00000184895|ENST00000383070|SRY	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.2153930664062	2	547.761632	1093.50871	-0.2854	-0.00015633	0.41474	0.00022718	0.12934	7.085E-05	547.7620881293842	54.847	0.41968	55.253	55.032	55.452	0.40663					12	9	2	0	0	0	0.20789	1	5591	5591		31.53	5.9558	1	117710			55694	7649	37174	37189	62984	62984					-0.03430324005262264
SRMHIILL	8	Unmodified	_SRMHIILL_					0	0	0			REV__nc|ENSG00000291239|Q3ZCX4-2|ZNF568	REV__nc|ENSG00000291239|Q3ZCX4-2|ZNF568	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7957763671875	2	491.796955	981.579357	-2.0878	-0.0010268	-0.45067	-0.00022164	-2.5385	-0.0012484	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.89494	1	4892	4892		37.159	5.2042	1	1484300	+		55695	23329	37175	37190	62985	62985					0.08783001050358052
SRMTNAVLHEV	11	Unmodified	_SRMTNAVLHEV_					0	0	0		nc|ENSG00000140718|Q9C0B1-2|FTO	nc|ENSG00000140718|Q9C0B1-2|FTO	nc|ENSG00000140718|Q9C0B1-2|FTO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.9156799316406	3	419.552045	1255.63431	-0.42861	-0.00017982	-2.4477	-0.001027	-2.8764	-0.0012068	419.550887779812	29.569	0.69311	29.54	29.257	29.95	-0.029207					39	15	4	0	0	0	0.17504	1	1895	1895		25.068	14.964	1	104440			55696	14961	37176	37191	62986	62986					0.016713430602976587
SRNAITRI	8	Unmodified	_SRNAITRI_					0	0	0		ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7778625488281	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.412	1	80.352	79.852	80.852	-0.059692								0	0	0	0.29344	1	8079	8079		31.955	1.4512	1				55697	6877	37177	37192	62987	62987					0.07307411740168845
SRNAKELAFR	10	Unmodified	_SRNAKELAFR_					0	0	0		nc|ENSG00000071889|P98173-3|FAM3A;nc|ENSG00000071889|P98173-2|FAM3A;ENSG00000071889|ENST00000447601|FAM3A	nc|ENSG00000071889|P98173-3|FAM3A	nc|ENSG00000071889|P98173-3|FAM3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3331298828125	2	596.333279	1190.652	0.54724	0.00032634	-1.0354	-0.00061744	-0.48816	-0.00029111	596.3325172883492	95.985	3.4694	96.39	95.216	98.686	0.40451					232	84	4	0	0	0	0.86621	1	11654	11654		26.063	0.48933	1	1225200			55698	1262	37178	37193	62988	62988					0.06430426377460208
SRNALGNVP	9	Unmodified	_SRNALGNVP_					0	0	0			REV__ENST00000310430.10_1_8:9637662-9637818:+|nuORF	REV__ENST00000310430.10_1_8:9637662-9637818:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2535705566406	2	464.253966	926.493378	0.59461	0.00027605	-0.68101	-0.00031616	-0.0864	-4.0112E-05	464.25355465849185	81.523	3.0273	81.667	79.894	82.921	0.14352					163	84	3	0	0	0	0.54908	1	7679	7679		49.536	5.91	1	434730	+		55699	24887	37179	37194	62989	62989					0.027191324691898444
SRNALGNVP	9	Unmodified	_SRNALGNVP_					0	0	0			REV__ENST00000310430.10_1_8:9637662-9637818:+|nuORF	REV__ENST00000310430.10_1_8:9637662-9637818:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	464.253966	926.493378	-1.2188	-0.00056582	1.1641	0.00054045	-0.054649	-2.5371E-05	464.25441329803914	81.663	2.6471	81.663	80.243	82.89	0	-0.050496	0.0008961	NaN	49.536	182	81	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	304200	+		55700	24887	37179	37194							0.027191324691898444
SRNALGNVP	9	Unmodified	_SRNALGNVP_					0	0	0			REV__ENST00000310430.10_1_8:9637662-9637818:+|nuORF	REV__ENST00000310430.10_1_8:9637662-9637818:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	464.253966	926.493378	0.42321	0.00019648	-0.42242	-0.00019611	0.00079128	3.6736E-07	464.2536702264611	81.676	3.1298	81.614	79.592	82.722	-0.062935	-0.10042	-0.00057702	NaN	49.536	192	86	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	499290	+		55701	24887	37179	37194							0.027191324691898444
SRNALGNVP	9	Unmodified	_SRNALGNVP_					0	0	0			REV__ENST00000310430.10_1_8:9637662-9637818:+|nuORF	REV__ENST00000310430.10_1_8:9637662-9637818:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	464.253966	926.493378	-0.68432	-0.0003177	0.76102	0.00035331	0.076693	3.5605E-05	464.2542028854426	81.528	2.4007	81.955	80.348	82.749	0.42645	0.24093	0.00052181	NaN	49.536	92	58	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	374620	+		55702	24887	37179	37194							0.027191324691898444
SRNALSVSI	9	Unmodified	_SRNALSVSI_					0	0	0			REV__ENSG00000259916|ENST00000561882|AQP7B	REV__ENSG00000259916|ENST00000561882|AQP7B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.7686462402344	2	473.769448	945.524344	-0.26148	-0.00012388	-0.32406	-0.00015353	-0.58554	-0.00027741	473.76948167571226	28.498	0.63564	28.458	28.116	28.752	-0.039906					26	15	2	0	0	0	0.58668	1	1427	1427		47.657	1.6851	1	72176	+		55703	23934	37180	37195	62990	62990					0.049402857834252245
SRNIKMLH	8	Unmodified	_SRNIKMLH_					0	0	0		nc|ENSG00000174837|Q14246-4|ADGRE1;nc|ENSG00000174837|Q14246-5|ADGRE1;nc|ENSG00000174837|Q14246-2|ADGRE1;nc|ENSG00000174837|Q14246-3|ADGRE1;ENSG00000174837|ENST00000312053|ADGRE1	nc|ENSG00000174837|Q14246-4|ADGRE1	nc|ENSG00000174837|Q14246-4|ADGRE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.9436950683594	2	499.781836	997.549119	-0.22949	-0.00011469	1.4429	0.00072111	1.2134	0.00060642	499.780092050268	50.104	0.61848	50.552	50.307	50.926	0.44761					28	14	4	0	0	0	0.4196	1	4925	4925		6.3127	0	1	362340			55704	6966	37181	37196	62991	62991					0.05024642385160405
SRNSARPTGQ	10	Unmodified	_SRNSARPTGQ_					0	0	0			REV__ENST00000504788.5_1_5:126112928-126171953:+|nuORF	REV__ENST00000504788.5_1_5:126112928-126171953:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.271728515625	2	537.275961	1072.53737	1.2388	0.00066558	3.2165	0.0017282	4.4553	0.0023937	537.2771822937506	24.304	0.91818	23.79	23.408	24.326	-0.51365					46	20	4	0	0	0	0.42897	1	1161	1161		61.691	5.2575	1	351380	+		55705	17992	37182	37197	62992	62992					0.004001168955255707
SRNTALLAWK	10	Unmodified	_SRNTALLAWK_					0	0	0		ENST00000568805.5_1_16:20809048-20811281:-|nuORF;nc|ENSG00000196678|A8K979-2|ERI2;ENSG00000196678|ENST00000357967|ERI2;ENST00000562215.1_1_16:20810515-20810692:-|nuORF;nc|ENSG00000196678|A8K979-3|ERI2;nc|ENSG00000196678|A8K979-4|ERI2	ENST00000568805.5_1_16:20809048-20811281:-|nuORF	ENST00000568805.5_1_16:20809048-20811281:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.3323364257812	2	580.332747	1158.65094	0.35844	0.00020801	-0.70205	-0.00040742	-0.34361	-0.00019941	580.3322580000553	39.826	0.82263	39.779	39.423	40.245	-0.04789					54	21	4	0	0	0	0.70553	1	2456	2456		44.377	0	1	1097600			55706	8092	37183	37198	62993	62993					0.0779621200854308
SRPAGPALLL	10	Unmodified	_SRPAGPALLL_					0	0	0		ENSG00000179163|ENST00000374479|FUCA1	ENSG00000179163|ENST00000374479|FUCA1	ENSG00000179163|ENST00000374479|FUCA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.7323913574219	2	497.805834	993.597115	0.53938	0.00026851	-2.736	-0.001362	-2.1966	-0.0010935	497.8045800037572	71.801	0.52945	71.932	71.684	72.213	0.1301					29	20	2	0	0	0	0.37624	1	6578	6578		21.96	5.4867	1	49331			55707	7251	37184	37199	62994	62994					0.10006039576853709
SRPAGPALLL	10	Unmodified	_SRPAGPALLL_					0	0	0		ENSG00000179163|ENST00000374479|FUCA1	ENSG00000179163|ENST00000374479|FUCA1	ENSG00000179163|ENST00000374479|FUCA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	497.805834	993.597115	-0.58059	-0.00028902	-2.0587	-0.0010248	-2.6393	-0.0013139	497.8050725414012	72.209	0.39938	72.169	71.941	72.34	-0.040382	0.1185	0.00054241	NaN	21.96	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33069			55708	7251	37184	37199							0.10006039576853709
SRPAGSGVCW	10	Unmodified	_SRPAGSGVCW_					0	0	0		ENST00000376395.8_2_9:86322580-86322796:-|nuORF	ENST00000376395.8_2_9:86322580-86322796:-|nuORF	ENST00000376395.8_2_9:86322580-86322796:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	510.2391662597656	2	510.240001	1018.46545	-0.60685	-0.00030964	0.59827	0.00030526	-0.0085743	-4.375E-06	510.2399579683379	36.416	1.0739	36.36	36.018	37.091	-0.055702					44	23	3	0	0	0	0.67571	1	2436	2436		45.972	1.4412	1	212660			55709	10817	37185	37200	62995	62995					-0.043045137825629354
SRPAQGSY	8	Unmodified	_SRPAQGSY_					0	0	0		ENSG00000057468|ENST00000263187|MSH4	ENSG00000057468|ENST00000263187|MSH4	ENSG00000057468|ENST00000263187|MSH4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.2557373046875	2	433.211766	864.40898	-0.16831	-7.2915E-05	-1.1268	-0.00048815	-1.2951	-0.00056107	433.2120921071596	107.34	0.44894	107.31	107.08	107.53	-0.034409					19	10	3	0	0	0	0.4196	1	11691	11691		49.442	0	1	161580			55710	1037	37186	37201	62996	62996					-0.02864818347563869
SRPASRPLG	9	Unmodified	_SRPASRPLG_					0	0	0		ENST00000271688.10_1_1:150941549-150947423:-|nuORF	ENST00000271688.10_1_1:150941549-150947423:-|nuORF	ENST00000271688.10_1_1:150941549-150947423:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76849365234375	2	470.769783	939.525013	-1.6002	-0.00075333	-0.071841	-3.3821E-05	-1.6721	-0.00078715	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.48102	1	4340	4340		52.937	5.0211	1	1490800			55711	9564	37187	37202	62997	62997					0.05283125223149909
SRPASRPLG	9	Unmodified	_SRPASRPLG_					0	0	0		ENST00000271688.10_1_1:150941549-150947423:-|nuORF	ENST00000271688.10_1_1:150941549-150947423:-|nuORF	ENST00000271688.10_1_1:150941549-150947423:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7693176269531	2	470.769783	939.525013	-0.5306	-0.00024979	-0.82903	-0.00039028	-1.3596	-0.00064007	470.76924692266675	54.862	1.6397	54.812	54.113	55.753	-0.049274					122	51	3	0	0	0	0.44421	2	4513	4513;4558		54.776	3.108	1	2604200			55712	9564	37187	37202	62998;62999	62998					0.05283125223149909
SRPASRPLG	9	Unmodified	_SRPASRPLG_					0	0	0		ENST00000271688.10_1_1:150941549-150947423:-|nuORF	ENST00000271688.10_1_1:150941549-150947423:-|nuORF	ENST00000271688.10_1_1:150941549-150947423:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7688903808594	2	470.769783	939.525013	-0.23699	-0.00011157	-1.3396	-0.00063064	-1.5766	-0.00074221	470.7690852138792	80.179	2.0778	80.595	78.892	80.97	0.41621					101	48	4	0	0	0	0.44421	1	9189	9189		54.776	6.8607	1	1333300			55713	9564	37187	37202	63000	63000					0.05283125223149909
SRPATDPQF	9	Unmodified	_SRPATDPQF_					0	0	0			REV__ENSG00000168447|ENST00000343070|SCNN1B	REV__ENSG00000168447|ENST00000343070|SCNN1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.75018310546875	2	509.751256	1017.48796	-1.5066	-0.000768	1.1842	0.00060364	-0.32243	-0.00016436	509.75170848529905	45.508	0.60259	45.508	45.213	45.815	0					32	14	3	0	0	0	0.48102	1	3349	3349		52.937	6.9847	1	141490	+		55714	21488	37188	37203	63001	63001					-0.020085911132809997
SRPDAIIVI	9	Unmodified	_SRPDAIIVI_					0	0	0		ENSG00000188064|ENST00000339464|WNT7B;ENSG00000154764|ENST00000285018|WNT7A	ENSG00000188064|ENST00000339464|WNT7B	ENSG00000188064|ENST00000339464|WNT7B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2978515625	2	492.297842	982.581131	0.010803	5.3184E-06	-0.45723	-0.0002251	-0.44643	-0.00021978	492.2974871625459	54.049	1.8007	54.456	53.861	55.661	0.40663					79	42	3	0	0	0	0.67345	1	5526	5526		42.396	0.96952	1	1817100			55715	5294	37189	37204	63002	63002					0.08914333339930636
SRPDQDPGGP	10	Unmodified	_SRPDQDPGGP_					0	0	0		ENST00000545827.6_1_16:943010-981646:-|nuORF;ENST00000566627.5_2_16:943010-997423:-|nuORF	ENST00000545827.6_1_16:943010-981646:-|nuORF	ENST00000545827.6_1_16:943010-981646:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.2373046875	2	513.23597	1024.45739	-0.382	-0.00019605	3.6824	0.0018899	3.3004	0.0016939	513.2377753489411	53.131	0.77744	53.107	52.783	53.56	-0.023849					28	19	2	0	0	0	0.70553	1	4750	4750		44.377	1.981	1	76451			55716	13580	37190	37205	63003	63003					-0.053863694983192545
SRPFGPLGA	9	Unmodified	_SRPFGPLGA_					0	0	0			REV__ENST00000262376.10_1_16:4931488-4931788:+|nuORF	REV__ENST00000262376.10_1_16:4931488-4931788:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.750732421875	2	451.248152	900.481751	0.4571	0.00020627	0.75976	0.00034284	1.2169	0.00054911	451.2483516516998	67.877	1.2398	68.005	67.282	68.522	0.12748					79	46	2	0	0	0	0.7932	1	6089	6089		26.796	0	1	170990	+		55717	24419	37191	37206	63004	63004					0.02752935445869298
SRPGNKGK	8	Unmodified	_SRPGNKGK_					0	0	0		ENSG00000137440|ENST00000382333|FGFBP1	ENSG00000137440|ENST00000382333|FGFBP1	ENSG00000137440|ENST00000382333|FGFBP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2056884765625	2	422.243401	842.472249	1.1003	0.00046459	4.3539	0.0018384	5.4542	0.002303	422.2451025016129	28.272	0.62245	28.098	27.846	28.468	-0.17336					28	15	2	0	0	0	0.4196	1	1721	1721		9.7057	0	1	139950			55718	4199	37192	37207	63005	63005					0.04471167160340883
SRPHFLIRSKL	11	Unmodified	_SRPHFLIRSKL_					0	0	0			REV__ENST00000431657.5_1_3:44409097-44442080:+|nuORF	REV__ENST00000431657.5_1_3:44409097-44442080:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.943115234375	3	451.941973	1352.80409	0.3266	0.00014761	2.2075	0.00099765	2.5341	0.0011453	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.75779	1	4257	4257		20.315	1.784	1	721610	+		55719	22320	37193	37208	63006	63006					0.1417982712500816
SRPHLFLI	8	Unmodified	_SRPHLFLI_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;ENSG00000166833|ENST00000349880|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1-5|NAV2;nc|ENSG00000166833|Q8IVL1-6|NAV2;nc|ENSG00000166833|Q8IVL1-7|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79541015625	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.82464	1	4000	4000		21.702	1.2205	1	1240000			55720	15072	37194	37209	63007	63007					0.08446074267999393
SRPHLFLI	8	Unmodified	_SRPHLFLI_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;ENSG00000166833|ENST00000349880|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1-5|NAV2;nc|ENSG00000166833|Q8IVL1-6|NAV2;nc|ENSG00000166833|Q8IVL1-7|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7958679199219	2	491.795269	981.575986	0.16895	8.3091E-05	0.70742	0.00034791	0.87638	0.000431	491.795491652363	46.653	1.8507	46.639	45.976	47.827	-0.013821					152	52	4	0	0	0	0.86791	1	3789	3789		28.254	1.4582	1	2674700			55721	15072	37194	37209	63008	63008					0.08446074267999393
SRPHLFLI	8	Unmodified	_SRPHLFLI_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;ENSG00000166833|ENST00000349880|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1-5|NAV2;nc|ENSG00000166833|Q8IVL1-6|NAV2;nc|ENSG00000166833|Q8IVL1-7|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7962646484375	2	491.795269	981.575986	-0.70573	-0.00034708	1.5523	0.0007634	0.84654	0.00041632	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.87807	1	4423	4423		31.579	7.3761	1	772710			55722	15072	37194	37209	63009	63009					0.08446074267999393
SRPHLFLI	8	Unmodified	_SRPHLFLI_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;ENSG00000166833|ENST00000349880|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1-5|NAV2;nc|ENSG00000166833|Q8IVL1-6|NAV2;nc|ENSG00000166833|Q8IVL1-7|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7763977050781	2	491.795269	981.575986	-0.2202	-0.00010829	1.6007	0.00078721	1.3805	0.00067891	491.79601005941703	71.721	1.7356	72.271	71.286	73.022	0.55009					63	41	2	0	0	0	0.4196	1	7966	7966		29.15	0	1	100490			55723	15072	37194	37209	63010	63010					0.08446074267999393
SRPIGQTI	8	Unmodified	_SRPIGQTI_					0	0	0			REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.25457763671875	2	436.253434	870.492316	2.1857	0.00095352	1.2941	0.00056457	3.4798	0.0015181	436.2538705634068	114.35	2.7328	114.38	114.11	116.84	0.026459					117	82	2	0	0	0	0.90523	1	12556	12556		40.778	5.5774	1	78531	+		55724	23137	37195	37210	63011	63011					0.051889181002820806
SRPIGQTI	8	Unmodified	_SRPIGQTI_					0	0	0			REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	REV__nc|ENSG00000196498|Q9Y618-5|NCOR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7541198730469	2	436.253434	870.492316	0.73698	0.00032151	2.4525	0.0010699	3.1895	0.0013914	436.25453302910074	111.84	0.49524	111.91	111.59	112.09	0.069542					26	14	2	0	0	0	0.93293	1	12041	12041		51.335	12.529	1	217290	+		55725	23137	37195	37210	63012	63012					0.051889181002820806
SRPIKMPAL	9	Unmodified	_SRPIKMPAL_					0	0	0			REV__nc|ENSG00000239474|O60662-2|KLHL41	REV__nc|ENSG00000239474|O60662-2|KLHL41	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	507.3008728027344	2	506.802237	1011.58992	-0.34654	-0.00017563	-1.8328	-0.00092887	-2.1793	-0.0011045	506.8012475613855	52.837	1.9821	52.763	52.142	54.124	-0.074509					82	54	2	0	0	0	0.77244	1	4293	4293		32.812	7.2384	1	214150	+		55726	23804	37196	37211	63013	63013					0.08458983704770162
SRPILMLRAPR	11	Unmodified	_SRPILMLRAPR_					0	0	0		ENST00000489998.5_1_1:157765891-157772050:-|nuORF;nc|ENSG00000163534|Q96LA6-2|FCRL1;ENSG00000163534|ENST00000368176|FCRL1;nc|ENSG00000163534|Q96LA6-3|FCRL1	ENST00000489998.5_1_1:157765891-157772050:-|nuORF	ENST00000489998.5_1_1:157765891-157772050:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2679138183594	3	437.267691	1308.78124	-0.7643	-0.0003342	1.128	0.00049324	0.3637	0.00015903	437.2680989446087	50.458	1.6052	50.435	49.633	51.238	-0.02343					188	43	5	0	0	0	0.74771	1	4385	4385		22.562	1.5294	1	2919200			55727	5818	37197	37212	63014	63014					0.13920484735899663
SRPIRGGG	8	Unmodified	_SRPIRGGG_					0	0	0			REV__ENST00000483458.1_1_9:131831674-131832729:+|nuORF	REV__ENST00000483458.1_1_9:131831674-131832729:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.22857666015625	2	400.230294	798.446034	-0.7523	-0.00030109	-3.6803	-0.001473	-4.4326	-0.0017741	400.2288641883786	54.868	1.9417	54.819	53.946	55.888	-0.049274					98	61	2	0	0	0	0.82658	1	4533	4533		21.96	0	1	1019300	+		55728	27490	37198	37213	63015	63015					0.03874897988862358
SRPISGRPL	9	Unmodified	_SRPISGRPL_					0	0	0			REV__ENSG00000076003|ENST00000264156|MCM6	REV__ENSG00000076003|ENST00000264156|MCM6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7966003417969	2	491.793258	981.571963	0.42504	0.00020903	4.4189	0.0021732	4.8439	0.0023822	491.7954861357076	59.345	2.1315	59.459	58.989	61.12	0.11396					113	74	3	0	0	0	0.78124	1	5056	5056		30.318	1.1477	1	139720	+		55729	16720	37199	37214	63016	63016					0.08043984774269575
SRPKLWSA	8	Unmodified	_SRPKLWSA_					0	0	0		ENSG00000275489|ENST00000614158|C17orf98	ENSG00000275489|ENST00000614158|C17orf98	ENSG00000275489|ENST00000614158|C17orf98	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7660827636719	2	472.769252	943.52395	-0.10826	-5.1183E-05	-4.2794	-0.0020232	-4.3877	-0.0020744	472.76709197007693	81.653	2.5573	81.717	80.353	82.91	0.064384					120	61	3	0	0	0	0.89043	1	8009	8009		35.618	1.4457	1	144950			55730	9004	37200	37215	63017	63017					0.04992910854218735
SRPLKPKMRF	10	Unmodified	_SRPLKPKMRF_					0	0	0			REV__ENST00000263168.3_1_1:113209759-113212204:+|nuORF	REV__ENST00000263168.3_1_1:113209759-113212204:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.59954833984375	3	420.58502	1258.73323	1.7197	0.00072329	3.9441	0.0016588	5.6638	0.0023821	420.9203104767057	24.238	0.17481	23.724	23.615	23.79	-0.51365					5	3	2	0	0	0	0.37624	1	1165	1165		13.508	3.8618	1	14892	+		55731	15409	37201	37216	63018	63018					0.11421410815842137
SRPLLGRG	8	Unmodified	_SRPLLGRG_					0	0	0			REV__ENST00000606197.1_1_6:22146912-22147092:+|nuORF	REV__ENST00000606197.1_1_6:22146912-22147092:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.3028564453125	2	428.261594	854.508634	0.39077	0.00016735	-4.4801	-0.0019187	-4.0893	-0.0017513	428.25877027506056	62.715	0.066788	62.836	62.799	62.866	0.1209					4	2	2	0	0	0	0.4196	1	5471	5471		17.365	0	1	43524	+		55732	29367	37202	37217	63019	63019					0.07556044057048439
SRPLPAAGRR	10	Unmodified	_SRPLPAAGRR_					0	0	0		ENST00000491351.5_1_14:24616897-24626527:+|nuORF	ENST00000491351.5_1_14:24616897-24626527:+|nuORF	ENST00000491351.5_1_14:24616897-24626527:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8222045898438	2	540.822881	1079.63121	-0.12124	-6.5567E-05	2.5976	0.0014048	2.4764	0.0013393	540.8240202358065	30.852	1.981	30.855	30.404	32.385	0.0037212					83	45	3	0	0	0	0.67571	1	2068	2068		45.972	3.108	1	218080			55733	12682	37203	37218	63020	63020					0.09457880788454531
SRPNGGCF	8	Unmodified	_SRPNGGCF_					0	0	0			REV__ENSG00000213047|ENST00000620048|DENND1B	REV__ENSG00000213047|ENST00000620048|DENND1B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.2978515625	2	419.187237	836.359921	-0.18812	-7.8857E-05	-3.7173	-0.0015583	-3.9054	-0.0016371	419.1855682201258	72.558	0.51139	72.595	72.435	72.946	0.037148					27	19	2	0	0	0	0.4196	1	6949	6949		12.959	0	1	37201	+		55734	23605	37204	37219	63021	63021					-0.06480429908162932
SRPPPYWP	8	Unmodified	_SRPPPYWP_					0	0	0			REV__ENST00000586645.5_1_19:19868918-19869302:-|nuORF	REV__ENST00000586645.5_1_19:19868918-19869302:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.7575378417969	2	500.255977	998.497401	-0.46279	-0.00023151	1.2893	0.00064496	0.82647	0.00041345	500.25647786664507	55.533	0.60284	55.497	55.243	55.846	-0.036823					31	20	2	0	0	0	0.88915	1	4659	4659		35.201	4.6971	1	102450	+		55735	29110	37205	37220	63022	63022					-0.0019077803710843
SRPPSGRRLSP	11	Unmodified	_SRPPSGRRLSP_					0	0	0		nc|ENSG00000105520|Q96GM1-2|PLPPR2;ENSG00000105520|ENST00000688289|PLPPR2;nc|ENSG00000105520|Q96GM1|PLPPR2;ENST00000588360.1_1_19:11471945-11474676:+|nuORF	nc|ENSG00000105520|Q96GM1-2|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.6454467773438	2	605.344178	1208.6738	0.13162	7.9673E-05	-3.0202	-0.0018282	-2.8885	-0.0017486	605.3423146628161	83.14	0.49324	83.571	83.294	83.787	0.43108					17	11	2	0	0	0	0.17275	1	9659	9659		15.333	0	1	127140			55736	2223	37206	37221	63023	63023					0.07781231126045896
SRPPTPII	8	Unmodified	_SRPPTPII_					0	0	0			REV__ENSG00000140943|ENST00000343411|MBTPS1	REV__ENSG00000140943|ENST00000343411|MBTPS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.76593017578125	2	440.766178	879.517802	0.40229	0.00017731	0.077187	3.4022E-05	0.47947	0.00021134	440.7660677899125	18.295	0.85853	17.674	17.21	18.069	-0.62141					39	19	3	0	0	0	0.88944	1	380	380		57.811	0	1	167020	+		55737	19649	37207	37222	63024	63024					0.07322392622711504
SRPRGRRDKKR	11	Unmodified	_SRPRGRRDKKR_					0	0	0		nc|ENSG00000197579|Q9NS56-2|TOPORS;ENSG00000197579|ENST00000360538|TOPORS	nc|ENSG00000197579|Q9NS56-2|TOPORS	nc|ENSG00000197579|Q9NS56-2|TOPORS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.6242370605469	3	471.287025	1410.83924	0.65402	0.00030823	0.88169	0.00041553	1.5357	0.00072376	471.28739779746195	22.716	0.83821	22.297	21.97	22.808	-0.41879					46	19	4	0	0	0	0.78351	1	924	924		14.779	0.085136	1	141220			55738	8177	37208	37223	63025	63025					0.15025882705526783
SRPRPPRRK	9	Unmodified	_SRPRPPRRK_					0	0	0		nc|ENSG00000158321|Q8WXX7-3|AUTS2;nc|ENSG00000158321|Q8WXX7-2|AUTS2;ENSG00000158321|ENST00000342771|AUTS2	nc|ENSG00000158321|Q8WXX7-3|AUTS2	nc|ENSG00000158321|Q8WXX7-3|AUTS2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3565063476562	2	575.357422	1148.70029	2.7444	0.001579	-2.4912	-0.0014334	0.25319	0.00014568	575.3555877165184	100.02	0.90025	99.965	99.32	100.22	-0.053734					23	20	2	0	0	0	0.20789	1	10870	10870		14.137	0	1	124800			55739	5472	37209	37224	63026	63026					0.1318896480802323
SRPTIEPKKPL	11	Unmodified	_SRPTIEPKKPL_					0	0	0			REV__nc|ENSG00000109686|Q5HYK7-3|SH3D19	REV__nc|ENSG00000109686|Q5HYK7-3|SH3D19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.59222412109375	3	422.590717	1264.75032	1.3012	0.00054986	3.2682	0.0013811	4.5693	0.001931	422.59197853531197	58.619	1.7414	58.653	57.951	59.692	0.033905					114	50	3	0	0	0	0.72892	1	5421	5421		26.75	0	1	112420	+		55740	17769	37210	37225	63027	63027					0.12853609902640528
SRPTPPARG	9	Unmodified	_SRPTPPARG_					0	0	0			REV__ENST00000373045.10_1_1:38259693-38260377:+|nuORF	REV__ENST00000373045.10_1_1:38259693-38260377:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.75726318359375	2	469.761958	937.509363	-0.023436	-1.1009E-05	-3.1496	-0.0014796	-3.173	-0.0014906	469.76032512029695	40.348	1.0077	40.3	40.046	41.054	-0.04789					61	38	2	0	0	0	0.67345	1	2586	2586		42.396	1.618	1	392540	+		55741	25743	37211	37226	63028	63028					0.03810838706078812
SRPTRPGLG	9	Unmodified	_SRPTRPGLG_					0	0	0			REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76885986328125	2	470.769783	939.525013	-1.6666	-0.00078458	-0.44144	-0.00020782	-2.108	-0.0009924	470.76948436620563	48.56	1.0696	48.56	48.244	49.314	0					49	25	3	0	0	0	0.25483	1	3774	3774		68.787	4.5796	1	317180	+		55742	28586	37212	37227	63029	63029					0.05283125223149909
SRPTRPGLG	9	Unmodified	_SRPTRPGLG_					0	0	0			REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7693786621094	2	470.769783	939.525013	-1.6002	-0.00075333	-0.071841	-3.3821E-05	-1.6721	-0.00078715	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.69624	1	4467	4467		40.778	5.1599	1	1490800	+		55743	28586	37212	37227	63030	63030					0.05283125223149909
SRPTRPGLG	9	Unmodified	_SRPTRPGLG_					0	0	0			REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	470.769783	939.525013	0.066126	3.113E-05	-2.5289	-0.0011905	-2.4628	-0.0011594	470.7685747577529	48.853	0.96841	48.847	48.387	49.355	-0.0056419	0.049013	-0.0010047	NaN	68.787	36	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	324610	+		55744	28586	37212	37227							0.05283125223149909
SRPTRPGLG	9	Unmodified	_SRPTRPGLG_					0	0	0			REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	470.769783	939.525013	-0.72217	-0.00033997	-1.4343	-0.00067521	-2.1564	-0.0010152	470.7689484073199	48.939	0.92227	48.914	48.444	49.366	-0.024849	0.1165	2.5978E-05	NaN	68.787	43	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254240	+		55745	28586	37212	37227							0.05283125223149909
SRPTRPGLG	9	Unmodified	_SRPTRPGLG_					0	0	0			REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	470.769783	939.525013	-0.78255	-0.0003684	-1.504	-0.00070802	-2.2865	-0.0010764	470.7690031796676	49.098	0.88	49.098	48.705	49.585	0.00016785	0.30048	-3.9647E-05	NaN	68.787	40	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	288850	+		55746	28586	37212	37227							0.05283125223149909
SRPTRPGLG	9	Unmodified	_SRPTRPGLG_					0	0	0			REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	470.769783	939.525013	-1.026	-0.00048301	-0.91714	-0.00043176	-1.9431	-0.00091477	470.76929275399254	48.647	0.78704	48.669	48.301	49.088	0.02227	-0.1287	0.00051287	NaN	68.787	40	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	290990	+		55747	28586	37212	37227							0.05283125223149909
SRPTRPGLG	9	Unmodified	_SRPTRPGLG_					0	0	0			REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	REV__ENST00000549583.5_1_12:57998622-57999209:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	470.769783	939.525013	0.30506	0.00014361	-2.2092	-0.00104	-1.9041	-0.00089639	470.76861297979144	48.661	0.88583	48.698	48.371	49.257	0.037731	-0.099562	-0.00070361	NaN	68.787	43	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	284770	+		55748	28586	37212	37227							0.05283125223149909
SRPTVVINLH	10	Unmodified	_SRPTVVINLH_					0	0	0			REV__CON__Q1A7A4	REV__CON__Q1A7A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.3344116210938	2	568.332747	1134.65094	0.70406	0.00040014	2.8789	0.0016362	3.583	0.0020363	568.3342850685762	52.838	0.66032	53.452	53.2	53.86	0.61436					40	15	4	0	0	0	0.21391	1	5332	5332		82.75	5.4329	1	1352400	+	+	55749	15998	37213	37228	63031	63031					0.08900212008552444
SRPVRHPPGG	10	Unmodified	_SRPVRHPPGG_					0	0	0			REV__nc|ENSG00000106772|Q8WUY3-4|PRUNE2	REV__nc|ENSG00000106772|Q8WUY3-4|PRUNE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2936401367188	2	530.293956	1058.57336	-1.2396	-0.00065735	-0.1035	-5.4883E-05	-1.3431	-0.00071223	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.54701	2	10818	10818;10831		52.937	6.9645	1	1818700	+		55750	17628	37214	37229	63032;63033	63032					0.0464161886304737
SRPVSGHPEGS	11	Unmodified	_SRPVSGHPEGS_					0	0	0		ENST00000406058.6_1_19:41305451-41306505:+|nuORF	ENST00000406058.6_1_19:41305451-41306505:+|nuORF	ENST00000406058.6_1_19:41305451-41306505:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.278076171875	2	555.270344	1108.52613	0.016599	9.2168E-06	3.2508	0.0018051	3.2674	0.0018143	555.2740240481572	75.662	1.4549	76.057	75.198	76.653	0.39507					89	34	5	0	0	0	0.638	1	8543	8543		40.058	3.6114	1	647320			55751	11268	37215	37230	63034	63034					-0.023787051986118968
SRQDRLRGAR	10	Unmodified	_SRQDRLRGAR_					0	0	0		ENST00000380636.1_1_X:12993550-12993946:+|nuORF	ENST00000380636.1_1_X:12993550-12993946:+|nuORF	ENST00000380636.1_1_X:12993550-12993946:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.5656433105469	3	405.565676	1213.6752	1.3821	0.00056055	-4.2072	-0.0017063	-2.825	-0.0011457	405.89828618709805	61.013	0.68465	61.044	60.43	61.114	0.0312					51	24	3	0	0	0	0.86195	1	5658	5658		33.039	1.9713	1	508750			55752	10926	37216	37231	63035	63035					0.0769086521479494
SRQDRLRGAR	10	Unmodified	_SRQDRLRGAR_					0	0	0		ENST00000380636.1_1_X:12993550-12993946:+|nuORF	ENST00000380636.1_1_X:12993550-12993946:+|nuORF	ENST00000380636.1_1_X:12993550-12993946:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.89898681640625	3	405.565676	1213.6752	0.37514	0.00015214	-3.1326	-0.0012705	-2.7575	-0.0011183	405.8987384717414	61.089	0.62099	61.208	60.689	61.31	0.11901					42	26	2	0	0	0	0.86647	1	5308	5308		28.577	4.0575	1	745630			55753	10926	37216	37231	63036	63036					0.0769086521479494
SRQEREKVN	9	Unmodified	_SRQEREKVN_					0	0	0		ENSG00000142621|ENST00000688493|FHAD1;nc|ENSG00000142621|B1AJZ9-4|FHAD1;nc|ENSG00000142621|B1AJZ9|FHAD1;nc|ENSG00000142621|B1AJZ9-3|FHAD1;ENST00000495195.5_1_1:15707786-15709690:+|nuORF;ENST00000477846.5_1_1:15707235-15714865:+|nuORF	ENSG00000142621|ENST00000688493|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.8170776367188	2	573.304718	1144.59488	1.5421	0.0008841	-2.6735	-0.0015327	-1.1314	-0.00064864	573.8055137776811	35.896	1.1172	36.337	35.997	37.115	0.44043					46	27	2	0	0	0	0.20789	1	2751	2751		25.574	0	1	340140			55754	4576	37217	37232	63037	63037					0.02836959101091452
SRQFSSRSG	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SRQFSSRSG_					1	0	0		ENSG00000167768|ENST00000252244|KRT1;CON__P04264	ENSG00000167768|ENST00000252244|KRT1	ENSG00000167768|ENST00000252244|KRT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.2570190429688	2	527.257237	1052.49992	0.66214	0.00034912	-0.65224	-0.0003439	0.0098962	5.2179E-06	527.2567706615374	25.253	0.8396	25.303	24.898	25.737	0.050451					79	32	4	0	0	0	0.21553	1	996	996		72.243	13.461	1	313920		+	55755	587	37218	37233	63038	63038					-0.02422974370074371
SRQFSSRSG	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SRQFSSRSG_					1	0	0		ENSG00000167768|ENST00000252244|KRT1;CON__P04264	ENSG00000167768|ENST00000252244|KRT1	ENSG00000167768|ENST00000252244|KRT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.2571411132812	2	527.257237	1052.49992	0.18982	0.00010008	-0.25683	-0.00013542	-0.067011	-3.5332E-05	527.2569773987498	25.608	1.1817	25.567	25.152	26.334	-0.041168					66	30	4	0	0	0	0.3164	1	1093	1093		63.534	8.7575	1	378560		+	55756	587	37218	37233	63039	63039					-0.02422974370074371
SRQGLHSL	8	Unmodified	_SRQGLHSL_					0	0	0			REV__ENST00000429356.5_1_1:24125204-24126010:-|nuORF	REV__ENST00000429356.5_1_1:24125204-24126010:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.7366943359375	2	449.248683	896.482814	-0.29389	-0.00013203	4.0036	0.0017986	3.7097	0.0016666	449.2502065173267	54.584	0.96218	55.161	54.493	55.455	0.57671					28	22	2	0	0	0	0.4196	1	5554	5554		42.396	11.892	1	131430	+		55757	26590	37219	37234	63040	63040					0.03043149814766366
SRQLHHRP	8	Unmodified	_SRQLHHRP_					0	0	0			REV__ENSG00000086570|ENST00000261800|FAT2	REV__ENSG00000086570|ENST00000261800|FAT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7775268554688	2	515.786299	1029.55804	0.43487	0.0002243	3.1363	0.0016177	3.5712	0.001842	515.787313564061	32.742	0.6833	32.869	32.503	33.186	0.12643					26	15	2	0	0	0	0.4196	1	2285	2285		38.806	1.647	1	214540	+		55758	16912	37220	37235	63041	63041					0.04444752065865032
SRQLKDPFLSF	11	Unmodified	_SRQLKDPFLSF_					0	0	0		nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A;ENSG00000119866|ENST00000642384|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	445.6360168457031	3	446.578588	1336.71394	-0.84188	-0.00037596	-2.538	-0.0011334	-3.3799	-0.0015094	446.57727545722275	38.105	0.45614	38.116	37.901	38.358	0.011173					17	10	2	0	0	0	0.17302	1	2616	2616		21.032	6.2534	1	51476			55759	3100	37221	37236	63042	63042					0.05904733005922935
SRQLKDPFLSF	11	Unmodified	_SRQLKDPFLSF_					0	0	0		nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A;ENSG00000119866|ENST00000642384|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	446.578588	1336.71394	-1.1135	-0.00049726	-2.1556	-0.00096263	-3.2691	-0.0014599	446.5775481120239	38.175	0.56684	38.125	37.85	38.417	-0.050369	0.049693	0.0011296	NaN	21.032	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51799			55760	3100	37221	37236							0.05904733005922935
SRQLKDPFLSF	11	Unmodified	_SRQLKDPFLSF_					0	0	0		nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A;ENSG00000119866|ENST00000642384|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	446.578588	1336.71394	-1.4191	-0.00063376	-1.9965	-0.00089161	-3.4157	-0.0015254	446.57762038541136	38.151	0.62896	38.168	37.931	38.56	0.016563	0.092785	0.0013426	NaN	21.032	30	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211780			55761	3100	37221	37236							0.05904733005922935
SRQLKDPFLSF	11	Unmodified	_SRQLKDPFLSF_					0	0	0		nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A;ENSG00000119866|ENST00000642384|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	446.578588	1336.71394	-0.01248	-5.5732E-06	-3.4635	-0.0015467	-3.476	-0.0015523	446.5769715403986	38.114	0.54598	38.056	37.798	38.344	-0.057915	-0.018986	-0.0006227	NaN	21.032	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	159250			55762	3100	37221	37236							0.05904733005922935
SRQPWPVL	8	Unmodified	_SRQPWPVL_					0	0	0		ENST00000450704.1_1_9:46843779-46844187:+|nuORF	ENST00000450704.1_1_9:46843779-46844187:+|nuORF	ENST00000450704.1_1_9:46843779-46844187:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.77618408203125	2	491.777077	981.5396	-0.25021	-0.00012305	-1.1803	-0.00058044	-1.4305	-0.00070349	491.77644489789066	71.355	1.1541	71.903	71.491	72.645	0.54756					59	27	4	0	0	0	0.79403	1	7976	7976		63.306	2.3343	1	610450			55763	11891	37222	37237	63043	63043					0.04809197371275786
SRQQPAFLYLG	11	Unmodified	_SRQQPAFLYLG_					0	0	0		ENST00000295148.8_1_2:24261765-24261885:-|nuORF	ENST00000295148.8_1_2:24261765-24261885:-|nuORF	ENST00000295148.8_1_2:24261765-24261885:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3272094726562	2	640.343312	1278.67207	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.8	1	107.92	107.42	108.42	0.11715								0	0	0	0.56276	1	13186	13186		47.657	6.2307	1				55764	9715	37223	37238	63044	63044					0.043881773174234695
SRQQRRGGL	9	Unmodified	_SRQQRRGGL_					0	0	0		nc|ENSG00000104341|Q86VI4|LAPTM4B	nc|ENSG00000104341|Q86VI4|LAPTM4B	nc|ENSG00000104341|Q86VI4|LAPTM4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.2974853515625	2	529.302313	1056.59007	0.13219	6.9967E-05	-4.1451	-0.002194	-4.0129	-0.002124	529.2996849049168	58.481	1.0948	59.034	58.597	59.692	0.55323					63	26	4	0	0	0	0.76764	1	6166	6166		34.173	1.3601	1	1371900			55765	14827	37224	37239	63045	63045					0.06404119749004167
SRQSSGHG	8	Unmodified	_SRQSSGHG_					0	0	0		ENSG00000197915|ENST00000368801|HRNR;CON__Q86YZ3	ENSG00000197915|ENST00000368801|HRNR	ENSG00000197915|ENST00000368801|HRNR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.5427551269531	2	408.191365	814.368178	0.38644	0.00015774	0.88508	0.00036128	1.2715	0.00051902	408.19178729388256	56.494	0.35333	57.053	56.832	57.185	0.55954					12	7	2	0	0	0	0.4196	1	5857	5857		17.365	13.681	1	134920		+	55766	631	37225	37240	63046	63046					-0.046431596671709485
SRQTLIHK	8	Unmodified	_SRQTLIHK_					0	0	0			REV__ENST00000534785.1_1_11:65061654-65063444:+|nuORF	REV__ENST00000534785.1_1_11:65061654-65063444:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79595947265625	2	491.793258	981.571963	0.13478	6.6286E-05	4.4765	0.0022015	4.6113	0.0022678	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.86677	1	5536	5536		27.882	3.3631	1	176030	+		55767	16202	37226	37241	63047	63047					0.08043984774280943
SRQVALIS	8	Unmodified	_SRQVALIS_					0	0	0			REV__nc|ENSG00000153922|O14646-2|CHD1	REV__nc|ENSG00000153922|O14646-2|CHD1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2577819824219	2	437.261259	872.507966	-2.028	-0.00088674	1.9353	0.00084622	-0.092683	-4.0527E-05	437.26180640120833	29.893	0.44395	29.893	29.793	30.237	0					16	12	2	0	0	0	0.4196	1	1344	1344		5.5578	0	1	18385	+		55768	20362	37227	37242	63048	63048					0.0666120461734181
SRRAAPQRRLL	11	Unmodified	_SRRAAPQRRLL_					0	0	0			REV__ENST00000290759.8_1_15:76630616-76633527:+|nuORF	REV__ENST00000290759.8_1_15:76630616-76633527:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9395446777344	3	441.940855	1322.80073	-1.4729	-0.00065094	-0.90136	-0.00039835	-2.3743	-0.0010493	441.94033054697593	56.641	1.0598	56.713	56.56	57.62	0.071835					108	50	3	0	0	0	0.76892	1	4828	4828		17.833	1.8264	1	756750	+		55769	24659	37228	37243	63049	63049					0.15224577071035128
SRRAAPQRRLL	11	Unmodified	_SRRAAPQRRLL_					0	0	0			REV__ENST00000290759.8_1_15:76630616-76633527:+|nuORF	REV__ENST00000290759.8_1_15:76630616-76633527:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.27227783203125	3	441.940855	1322.80073	0.14983	6.6214E-05	-2.2547	-0.00099645	-2.1049	-0.00093024	441.9395205579897	52.447	1.075	53.114	52.715	53.79	0.6673					72	25	4	0	0	0	0.17289	1	5335	5335		11.932	0.47776	1	431270	+		55770	24659	37228	37243	63050	63050					0.15224577071035128
SRRALLRLAR	10	Unmodified	_SRRALLRLAR_					0	0	0			REV__ENST00000578529.5_1_18:214628-260326:-|nuORF	REV__ENST00000578529.5_1_18:214628-260326:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.9295959472656	3	404.598429	1210.77346	0.24235	9.8055E-05	-0.90574	-0.00036646	-0.66339	-0.00026841	404.59809055238287	46.232	0.77098	46.27	45.811	46.582	0.038185					34	21	2	0	0	0	0.37624	1	3389	3389		6.3209	0	1	243510	+		55771	16777	37229	37244	63051	63051					0.17650093530642152
SRRAPKKGRKV	11	Unmodified	_SRRAPKKGRKV_					0	0	0		ENST00000542104.5_2_12:65090023-65090110:+|nuORF	ENST00000542104.5_2_12:65090023-65090110:+|nuORF	ENST00000542104.5_2_12:65090023-65090110:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.30279541015625	3	428.277467	1281.81057	-0.30128	-0.00012903	-1.4205	-0.00060838	-1.7218	-0.00073741	428.27753881482704	63.933	0.68536	64.32	64.178	64.863	0.3868					20	15	2	0	0	0	0.17272	1	6902	6902		20.315	0	1	31568			55772	13524	37230	37245	63052	63052					0.18093765076400814
SRREAKGP	8	Unmodified	_SRREAKGP_					0	0	0			REV__ENST00000286692.8_1_1:111682220-111682499:-|nuORF	REV__ENST00000286692.8_1_1:111682220-111682499:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7535095214844	2	450.754133	899.493713	-1.4711	-0.00066312	1.4399	0.00064903	-0.031247	-1.4085E-05	450.7547246648738	79.827	2.1578	79.926	78.179	80.337	0.098701					99	70	2	0	0	0	0.89043	1	7565	7565		35.618	1.4457	1	155440	+		55773	24642	37231	37246	63053	63053					0.03994552189044498
SRRFCVKLLLY	11	Unmodified	_SRRFCVKLLLY_					0	0	0			REV__ENSG00000121742|ENST00000647029|GJB6	REV__ENSG00000121742|ENST00000647029|GJB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.60809326171875	3	466.607713	1396.80131	0.32068	0.00014963	0.26876	0.0001254	0.58944	0.00027504	466.60769889886956	100.37	2.2833	100.42	99.018	101.3	0.046356					147	53	4	0	0	0	0.74771	1	10730	10730		22.562	2.5311	1	458180	+		55774	18465	37232	37247	63054	63054					0.11878235675885662
SRRFMRRRKRR	11	Unmodified	_SRRFMRRRKRR_					0	0	0		ENST00000391975.5_1_2:242194961-242195633:-|nuORF	ENST00000391975.5_1_2:242194961-242195633:-|nuORF	ENST00000391975.5_1_2:242194961-242195633:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	535.6594848632812	3	535.658687	1603.95423	1.2444	0.00066656	0.60175	0.00032233	1.8461	0.00098889	535.6590630090653	108.06	0.12037	108.1	108.03	108.15	0.034355					6	4	2	0	0	0	0.92221	1	11879	11879		1.2319	0.083693	1	1780500			55775	11004	37233	37248	63055	63055					0.17641288635672936
SRRGGQSH	8	Unmodified	_SRRGGQSH_					0	0	0			REV__ENSG00000184210|ENST00000333026|DGAT2L6	REV__ENSG00000184210|ENST00000333026|DGAT2L6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7880554199219	2	442.725907	883.43726	-0.1712	-7.5795E-05	2.5348	0.0011222	2.3636	0.0010464	442.7272338679401	38.17	0.43946	38.692	38.513	38.952	0.52235					13	10	2	0	0	0	0.4196	1	3151	3151		14.865	0	1	102140	+		55776	22654	37234	37249	63056	63056					-0.00912075647624988
SRRGPLAGL	9	Unmodified	_SRRGPLAGL_					0	0	0		ENSG00000069248|ENST00000261396|NUP133;ENST00000366678.4_1_1:229634943-229644011:-|nuORF	ENSG00000069248|ENST00000261396|NUP133	ENSG00000069248|ENST00000261396|NUP133	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.7807922363281	2	463.780151	925.545748	-0.0076852	-3.5643E-06	-2.2791	-0.001057	-2.2868	-0.0010606	463.7789487547492	39.5	0.41193	39.447	39.191	39.603	-0.052731					16	10	2	0	0	0	0.7932	2	2410	2410;2434		25.574	1.3713	1	217060			55777	1216	37235	37250	63057;63058	63057					0.07999715602818469
SRRIPPSD	8	Unmodified	_SRRIPPSD_					0	0	0			REV__ENSG00000196935|ENST00000355086|SRGAP1	REV__ENSG00000196935|ENST00000355086|SRGAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2536926269531	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.87064	1	8061	8061		29.15	0	1	1482000	+		55778	23182	37236	37251	63059	63059					0.027191324691784757
SRRKGPAP	8	Unmodified	_SRRKGPAP_					0	0	0		nc|ENSG00000212719|A8MQB3|LINC02693	nc|ENSG00000212719|A8MQB3|LINC02693	nc|ENSG00000212719|A8MQB3|LINC02693	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7602233886719	2	434.759218	867.503883	1.0426	0.00045328	-1.4353	-0.00062401	-0.39271	-0.00017073	434.7588689622068	87.637	3.2918	87.563	86.012	89.304	-0.073997					167	77	4	0	0	0	0.81184	1	9133	9133		19.997	0	1	1572200			55779	15245	37237	37252	63060	63060					0.06483159914284897
SRRKLLLTF	9	Unmodified	_SRRKLLLTF_					0	0	0			REV__ENSG00000174343.6,CHRNA9,chr4,+,I6.1,40349415,40349586|18|11.55|1|intron	REV__ENSG00000174343.6,CHRNA9,chr4,+,I6.1,40349415,40349586|18|11.55|1|intron	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.363037109375	2	567.361308	1132.70806	0.15466	8.7749E-05	3.9039	0.0022149	4.0585	0.0023027	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.76255	1	3192	3192		35.618	6.4687	1	1937600	+		55780	21986	37238	37253	63061	63061					0.14701679284939928
SRRKLPKER	9	Unmodified	_SRRKLPKER_					0	0	0			REV__nc|ENSG00000197555|O43166-3|SIPA1L1	REV__nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	585.3634643554688	2	585.364913	1168.71527	2.7241	0.0015946	-3.2509	-0.001903	-0.52683	-0.00030839	585.3631050744117	97.599	1.1009	97.544	97.187	98.288	-0.055542					64	25	3	0	0	0	0.7932	1	10507	10507		25.574	3.6142	1	488060	+		55781	23244	37239	37254	63062	63062					0.1376641188535359
SRRKRDFY	8	Unmodified	_SRRKRDFY_					0	0	0			REV__ENSG00000173726|ENST00000366607|TOMM20	REV__ENSG00000173726|ENST00000366607|TOMM20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.3082275390625	2	564.307064	1126.59957	0.48028	0.00027102	1.8443	0.0010407	2.3245	0.0013118	564.3080689248469	74.956	0.69521	75.52	75.289	75.984	0.56458					40	16	4	0	0	0	0.88601	1	8504	8504		34.173	5.023	1	1100100	+		55782	21948	37240	37255	63063	63063					0.04133888034516531
SRRKTLGHW	9	Unmodified	_SRRKTLGHW_					0	0	0		ENST00000322313.8_1_2:128522802-128525763:-|nuORF	ENST00000322313.8_1_2:128522802-128525763:-|nuORF	ENST00000322313.8_1_2:128522802-128525763:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.821533203125	2	570.822881	1139.63121	0.16054	9.164E-05	2.4728	0.0014116	2.6334	0.0015032	570.8240970044897	61.664	0.90487	61.631	61.356	62.261	-0.033173					76	36	3	0	0	0	0.78983	1	5837	5837		27.882	0	1	637440			55783	10046	37241	37256	63064	63064					0.06697880788487964
SRRKTPVI	8	Unmodified	_SRRKTPVI_					0	0	0		ENST00000533381.5_1_11:118925895-118927580:-|nuORF;ENST00000543287.5_1_11:118919950-118926831:-|nuORF;ENSG00000149428|ENST00000617285|HYOU1	ENST00000533381.5_1_11:118925895-118927580:-|nuORF	ENST00000533381.5_1_11:118925895-118927580:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8060302734375	2	478.803626	955.592698	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.572	1	42.543	42.043	43.043	-0.029461								0	0	0	0.29871	1	3188	3188		23.042	1.0826	1				55784	5024	37242	37257	63065	63065					0.11312575153931448
SRRLGGLRP	9	Unmodified	_SRRLGGLRP_					0	0	0		ENSG00000110104|ENST00000227520|CCDC86	ENSG00000110104|ENST00000227520|CCDC86	ENSG00000110104|ENST00000227520|CCDC86	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3092346191406	2	506.312149	1010.60975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.582	1	63.612	63.112	64.112	0.030243								0	0	0	0.29134	1	5570	5570		34.173	1.3601	1				55785	2512	37243	37258	63066	63066					0.10486495759755599
SRRLKEENK	9	Unmodified	_SRRLKEENK_					0	0	0			REV__ENST00000505131.1_1_4:48384636-48389420:+|nuORF	REV__ENST00000505131.1_1_4:48384636-48389420:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.3319702148438	2	580.330736	1158.64692	0.35844	0.00020801	2.7639	0.001604	3.1223	0.001812	580.3322580000553	39.826	0.82263	39.779	39.423	40.245	-0.04789					54	21	4	0	0	0	0.41566	1	2488	2488		56.721	7.185	1	1097600	+		55786	17750	37244	37259	63067	63067					0.0739412251482463
SRRLPPLRWS	10	Unmodified	_SRRLPPLRWS_					0	0	0			REV__ENST00000524511.5_2_17:33774297-33775374:-|nuORF	REV__ENST00000524511.5_2_17:33774297-33775374:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3765869140625	2	634.372738	1266.73092	6.8506	0.0043458	-0.37733	-0.00023937	6.4732	0.0041064	634.3723115389404	111.82	0.6669	111.85	111.67	112.34	0.032715					57	24	4	0	0	0	0.86272	1	13568	13568		24.519	0.99649	1	3829000	+		55787	28164	37245	37260	63068	63068					0.10822698402421338
SRRLRARTHL	10	Unmodified	_SRRLRARTHL_					0	0	0		ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1;nc|ENSG00000075275|Q9NYQ6-2|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	ENSG00000075275|ENST00000674500|CELSR1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.366943359375	2	633.386711	1264.75887	1.2719	0.0008056	-1.6535	-0.0010473	-0.38163	-0.00024172	633.3855005294203	94.408	1.2464	94.454	94.332	95.578	0.046181					46	29	3	0	0	0	0.37624	1	9972	9972		2.7184	0	1	162310			55788	1328	37246	37261	63069	63069					0.13708021382512925
SRRLTYGNELA	11	Unmodified	_SRRLTYGNELA_					0	0	0			REV__ENST00000509702.5_1_4:23766811-23826805:-|nuORF	REV__ENST00000509702.5_1_4:23766811-23826805:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3463745117188	2	640.341301	1278.66805	4.3956	0.0028147	4.0493	0.0025929	8.4449	0.0054076	640.343646089099	102.73	0.67924	103.03	102.81	103.49	0.29865					86	22	4	0	0	0	0.53361	2	12510	12510;12551		49.536	8.1094	1	12674000	+		55789	17776	37247	37262	63070;63071	63070					0.0398608782370502
SRRLTYGNELA	11	Unmodified	_SRRLTYGNELA_					0	0	0			REV__ENST00000509702.5_1_4:23766811-23826805:-|nuORF	REV__ENST00000509702.5_1_4:23766811-23826805:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.34619140625	2	640.341301	1278.66805	4.5976	0.002944	3.7635	0.0024099	8.3611	0.005354	640.3436898921979	103.43	0.74184	103.69	103.46	104.2	0.26524					50	17	4	0	0	0	0.41466	1	12605	12605		58.23	1.7961	1	7001000	+		55790	17776	37247	37262	63072	63072					0.0398608782370502
SRRLWKFFWEM	11	Unmodified	_SRRLWKFFWEM_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.2730712890625	3	529.274734	1584.80237	-0.036706	-1.9428E-05	-2.9238	-0.0015475	-2.9605	-0.0015669	529.2730968301188	71.514	1.1317	71.548	71.148	72.279	0.034004					161	46	5	0	0	0	0.75457	2	6794	6794;6839		21.032	11.386	1	1262700			55791	2832	37248	37263	63073;63074	63073					0.03336450044753292
SRRLWKFFWEM	11	Unmodified	_SRRLWKFFWEM_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.6070556640625	3	529.274734	1584.80237	0.087973	4.6562E-05	-3.0282	-0.0016028	-2.9402	-0.0015562	529.6074494906942	71.247	0.96676	71.285	70.943	71.91	0.038055					159	46	4	0	0	0	0.69687	2	6829	6829;6870		32.034	8.6562	1	1379900			55792	2832	37248	37263	63075;63076	63075					0.03336450044753292
SRRLWKFFWEM	11	Unmodified	_SRRLWKFFWEM_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	529.274734	1584.80237	-0.93375	-0.00049421	-1.8731	-0.00099141	-2.8069	-0.0014856	529.6077588065453	71.408	0.26288	71.484	71.43	71.693	0.076225	0.068959	0.0015768	NaN	32.034	23	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60580			55793	2832	37248	37263							0.03336450044753292
SRRNQESNF	9	Unmodified	_SRRNQESNF_					0	0	0		ENSG00000095015|ENST00000399503|MAP3K1	ENSG00000095015|ENST00000399503|MAP3K1	ENSG00000095015|ENST00000399503|MAP3K1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.2736206054688	2	569.273418	1136.53228	-0.036344	-2.069E-05	-3.4842	-0.0019835	-3.5206	-0.0020042	569.2711420389895	63.396	0.70454	63.362	63.146	63.851	-0.03371					55	29	3	0	0	0	0.67345	1	6013	6013		42.396	4.5846	1	162990			55794	1717	37249	37264	63077	63077					-0.030521869671019886
SRRPLLPAS	9	Unmodified	_SRRPLLPAS_					0	0	0		ENST00000257013.8_1_X:134166773-134167211:+|nuORF	ENST00000257013.8_1_X:134166773-134167211:+|nuORF	ENST00000257013.8_1_X:134166773-134167211:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.8030700683594	2	498.801083	995.587613	0.3731	0.0001861	-0.12173	-6.0717E-05	0.25138	0.00012539	498.80309173814476	53.226	0.55856	53.296	53.083	53.642	0.070713					22	15	2	0	0	0	0.7932	1	4334	4334		21.96	2.5999	1	55521			55795	9347	37250	37265	63078	63078					0.08964271291324621
SRRPLRLALPL	11	Unmodified	_SRRPLRLALPL_					0	0	0			REV__ENST00000378292.7_1_9:35690423-35690990:-|nuORF	REV__ENST00000378292.7_1_9:35690423-35690990:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	646.4214477539062	2	646.419688	1290.82482	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.47	1	65.596	65.096	66.096	0.12532								0	0	0	0.56276	1	5821	5821		29.17	3.596	1		+		55796	25893	37251	37266	63079	63079					0.1910441750467271
SRRPPAAPS	9	Unmodified	_SRRPPAAPS_					0	0	0		ENST00000590806.5_1_19:10922561-10941720:+|nuORF;nc|ENSG00000079805|P50570-3|DNM2;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000079805|P50570|DNM2;ENSG00000079805|ENST00000389253|DNM2	ENST00000590806.5_1_19:10922561-10941720:+|nuORF	ENST00000590806.5_1_19:10922561-10941720:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.75958251953125	2	469.761958	937.509363	-1.0554	-0.00049577	-1.9277	-0.00090556	-2.9831	-0.0014013	469.7608617085479	40.328	1.2889	40.334	40.071	41.36	0.0065002					73	45	3	0	0	0	0.78058	1	2604	2604		30.504	0	1	435990			55797	1428	37252	37267	63080	63080					0.03810838706078812
SRRPPPPPPSK	11	Unmodified	_SRRPPPPPPSK_					0	0	0			REV__nc|ENSG00000277363|Q9C0H9-2|SRCIN1	REV__nc|ENSG00000277363|Q9C0H9-2|SRCIN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.9017028808594	3	405.903406	1214.68839	0.26011	0.00010558	-0.88543	-0.0003594	-0.62532	-0.00025382	405.9030318995657	15.77	0.21161	15.171	15.119	15.331	-0.59873					7	5	2	0	0	0	0.70278	1	48	48		31.068	0.49928	1	50194	+		55798	24023	37253	37268	63081	63081					0.08963303274163081
SRRPPPPPPSK	11	Unmodified	_SRRPPPPPPSK_					0	0	0			REV__nc|ENSG00000277363|Q9C0H9-2|SRCIN1	REV__nc|ENSG00000277363|Q9C0H9-2|SRCIN1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	405.903406	1214.68839	0.26011	0.00010558	-0.88543	-0.0003594	-0.62532	-0.00025382	405.9030318995657	15.77	0.21161	15.171	15.119	15.331	-0.59873	-0.049757	0.0014149	NaN	31.068	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50194	+		55799	24023	37253	37268							0.08963303274163081
SRRPRSNESE	10	Unmodified	_SRRPRSNESE_					0	0	0			REV__ENST00000480342.5_1_1:8525723-8716473:-|nuORF	REV__ENST00000480342.5_1_1:8525723-8716473:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7848815917969	3	406.537563	1216.59086	1.1212	0.00045583	2.0978	0.00085285	3.2191	0.0013087	406.5385240493266	32.657	0.42612	32.784	32.634	33.06	0.12643					15	9	2	0	0	0	0.37624	1	2282	2282		15.333	0	1	116970	+		55800	19744	37254	37269	63082	63082					-0.008771303926323526
SRRQPILG	8	Unmodified	_SRRQPILG_					0	0	0			REV__ENSG00000183206|ENST00000358970|POTEC	REV__ENSG00000183206|ENST00000358970|POTEC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.7995300292969	2	463.780151	925.545748	-1.3781	-0.00063915	-2.2833	-0.0010589	-3.6614	-0.0016981	463.7790169634695	41.594	0.29165	41.597	41.378	41.67	0.0034142					9	6	2	0	0	0	0.4196	1	3055	3055		24.203	4.8428	1	76463	+		55801	21283	37255	37270	63083	63083					0.079997156028071
SRRRFQRRMQR	11	Unmodified	_SRRRFQRRMQR_					0	0	0		ENST00000454020.1_3_2:234756047-234763110:-|nuORF;nc|ENSG00000123485|Q8NCD3-3|HJURP;nc|ENSG00000123485|Q8NCD3-2|HJURP;ENSG00000123485|ENST00000411486|HJURP	ENST00000454020.1_3_2:234756047-234763110:-|nuORF	ENST00000454020.1_3_2:234756047-234763110:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7820434570312	3	526.299047	1575.87531	-0.86567	-0.0004556	2.3325	0.0012276	1.4668	0.00077199	526.3003798290181	47.214	0.52137	48.138	47.871	48.393	0.92315					15	12	2	0	0	0	0.18318	1	4477	4477		3.2113	0	1	1726300			55802	3276	37256	37271	63084	63084					0.11041016610738552
SRRRLGRLW	9	Unmodified	_SRRRLGRLW_					0	0	0		ENST00000590278.1_1_19:33696051-33698478:+|nuORF;ENSG00000130881|ENST00000253193|LRP3	ENST00000590278.1_1_19:33696051-33698478:+|nuORF	ENST00000590278.1_1_19:33696051-33698478:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5822448730469	3	400.579257	1198.71594	3.4046	0.0013638	0.50262	0.00020134	3.9073	0.0015652	400.91389036014743	114.35	0.33887	114.36	114.25	114.59	0.0094528					26	15	2	0	0	0	0.7932	1	13821	13821		22.58	2.2646	1	37392			55803	3695	37257	37272	63085	63085					0.12453251325086967
SRRRPKGPASR	11	Unmodified	_SRRRPKGPASR_					0	0	0			REV__nc|ENSG00000121274|Q8NDF8-5|TENT4B	REV__nc|ENSG00000121274|Q8NDF8-5|TENT4B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.37646484375	2	634.376343	1266.73813	2.1873	0.0013876	-0.54577	-0.00034622	1.6415	0.0010413	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.68532	1	13309	13309		33.922	4.7516	1	6886400	+		55804	29815	37258	37273	63086	63086					0.11543431002814941
SRRRRHLRRRQ	11	Unmodified	_SRRRRHLRRRQ_					0	0	0			REV__ENST00000215832.10_1_22:22221790-22221904:-|nuORF	REV__ENST00000215832.10_1_22:22221790-22221904:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3253784179688	3	526.324584	1575.95192	-0.10918	-5.7462E-05	1.5967	0.00084039	1.4875	0.00078293	526.3253457782059	108.92	1.0597	109.05	108.28	109.34	0.13026					52	28	2	0	0	0	0.92084	1	11652	11652		1.3219	0.95051	1	2107400	+		55805	24118	37259	37274	63087	63087					0.18698576222232077
SRRRRRKRA	9	Unmodified	_SRRRRRKRA_					0	0	0		ENST00000518385.5_3_8:97506087-97614626:+|nuORF;ENST00000302190.8_1_8:97506012-97605724:+|nuORF	ENST00000518385.5_3_8:97506087-97614626:+|nuORF	ENST00000518385.5_3_8:97506087-97614626:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.9325256347656	3	414.601055	1240.78134	0.19107	7.922E-05	0.66425	0.0002754	0.85532	0.00035462	414.60133881213045	43.061	1.0482	43.031	42.675	43.723	-0.029461					35	24	2	0	0	0	0.20789	1	3266	3266		4.6126	0	1	102960			55806	9817	37260	37275	63088	63088					0.1705766557079187
SRRRRRKRKK	10	Unmodified	_SRRRRRKRKK_					0	0	0			REV__ENST00000467963.5_3_5:889215-891867:-|nuORF	REV__ENST00000467963.5_3_5:889215-891867:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.319580078125	3	476.318659	1425.93415	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.26	1	48.26	47.76	48.76	0								0	0	0	0.45132	1	3735	3735		13.508	4.2961	1		+		55807	15866	37261	37276	63089	63089					0.23821860967382236
SRRRRRPPN	9	Unmodified	_SRRRRRPPN_					0	0	0			REV__ENSG00000127129|ENST00000372587|EDN2	REV__ENSG00000127129|ENST00000372587|EDN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8564453125	2	597.855578	1193.6966	-0.32365	-0.0001935	2.4587	0.0014699	2.135	0.0012764	598.3588954923197	94.611	4.9065	94.611	93.622	98.528	0					293	115	3	0	0	0	0.7932	1	9280	9280		24.519	0	1	5706300	+		55808	18724	37262	37277	63090	63090					0.10750295034176816
SRRRRRTARIR	11	Unmodified	_SRRRRRTARIR_					0	0	0			REV__ENST00000323039.9_2_19:40321124-40324722:-|nuORF	REV__ENST00000323039.9_2_19:40321124-40324722:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3280029296875	3	495.313685	1482.91923	0.75485	0.00037389	2.7968	0.0013853	3.5516	0.0017592	495.31504027907846	15.458	0.16022	15.434	15.325	15.485	-0.024207					7	4	2	0	0	0	0.17925	1	33	33		20.315	2.4819	1	88953	+		55809	25027	37263	37278	63091	63091					0.1970836909938498
SRRSFRDN	8	Unmodified	_SRRSFRDN_					0	0	0			REV__ENSG00000118308|ENST00000556887|IRAG2	REV__ENSG00000118308|ENST00000556887|IRAG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2892456054688	2	519.265396	1036.51624	-0.10555	-5.4808E-05	1.2453	0.00064664	1.1398	0.00059184	519.7680258353855	61.809	1.0726	62.363	62.006	63.079	0.55386					31	24	3	0	0	0	0.4196	1	6579	6579		31.53	4.8369	1	76971	+		55810	18303	37264	37279	63092	63092					-0.0005584841333075019
SRRSTLIRLIE	11	Unmodified	_SRRSTLIRLIE_					0	0	0			REV__nc|ENSG00000143473|O95259-2|KCNH1	REV__nc|ENSG00000143473|O95259-2|KCNH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.6094055175781	3	448.60877	1342.80448	0.6314	0.00028325	0.36355	0.00016309	0.99495	0.00044634	448.60887470875934	77.01	0.99304	77.058	76.682	77.675	0.047981					82	45	2	0	0	0	0.77511	1	7531	7531		16.53	1.1967	1	702210	+		55811	19813	37265	37280	63093	63093					0.146792020542307
SRRSVLKG	8	Unmodified	_SRRSVLKG_					0	0	0			REV__nc|ENSG00000157593|Q8TB61-5|SLC35B2	REV__nc|ENSG00000157593|Q8TB61-5|SLC35B2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7799987792969	2	451.780151	901.545748	-0.13936	-6.2962E-05	-0.28058	-0.00012676	-0.41994	-0.00018972	451.78016542853146	86.777	1.2456	86.844	86.37	87.616	0.067444					84	28	4	0	0	0	0.87064	1	8779	8779		29.15	3.6994	1	241100	+		55812	20552	37266	37281	63094	63094					0.09103715602816465
SRRTPTRLLP	10	Unmodified	_SRRTPTRLLP_					0	0	0			REV__ENST00000246792.3_1_19:50140144-50140374:-|nuORF	REV__ENST00000246792.3_1_19:50140144-50140374:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	598.8572387695312	2	598.864746	1195.71494	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.338	1	16.386	15.886	16.886	0.047804								0	0	0	0.45132	1	141	141		19.997	0	1		+		55813	24263	37267	37282	63095	63095					0.12490992165521675
SRRVFGKG	8	Unmodified	_SRRVFGKG_					0	0	0			REV__ENSG00000143067|ENST00000421812|ZNF697	REV__ENSG00000143067|ENST00000421812|ZNF697	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.765625	2	453.767043	905.519533	-0.68019	-0.00030865	-1.9784	-0.00089773	-2.6586	-0.0012064	453.76595867502624	41.947	1.3916	41.95	41.419	42.811	0.0034142					70	33	3	0	0	0	0.884	1	3152	3152		33.516	5.2613	1	213660			55814	19768	37268	37283	63096	63096					0.06299446431341948
SRRVVKVLFG	10	Unmodified	_SRRVVKVLFG_					0	0	0		ENSG00000204021|ENST00000404190|LIPK	ENSG00000204021|ENST00000404190|LIPK	ENSG00000204021|ENST00000404190|LIPK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.8265380859375	2	580.866757	1159.71896	-0.40879	-0.00023745	-1.5259	-0.00088635	-1.9347	-0.0011238	580.8653283254829	63.49	1.2604	64.044	63.425	64.686	0.55449					64	29	3	0	0	0	0.37624	1	6908	6908		26.693	9.3279	1	180900			55815	8408	37269	37284	63097	63097					0.14549081659220064
SRSALLPPG	9	Unmodified	_SRSALLPPG_					0	0	0		nc|ENSG00000130529|Q8TD43-2|TRPM4;nc|ENSG00000130529|Q8TD43-3|TRPM4;ENSG00000130529|ENST00000252826|TRPM4	nc|ENSG00000130529|Q8TD43-2|TRPM4	nc|ENSG00000130529|Q8TD43-2|TRPM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.25982666015625	2	449.261259	896.507966	-1.1655	-0.00052364	-0.32901	-0.00014781	-1.4946	-0.00067145	449.26086608568033	70.705	0.68031	70.776	70.454	71.134	0.071037					61	34	2	0	0	0	0.7932	1	6385	6385		21.96	0	1	315510			55816	3652	37270	37285	63098	63098					0.05557204617332445
SRSARLIRHRR	11	Unmodified	_SRSARLIRHRR_					0	0	0		nc|ENSG00000140265|Q8IWY8-2|ZSCAN29;ENSG00000140265|ENST00000684362|ZSCAN29;ENST00000566849.5_1_15:43653273-43656590:-|nuORF;nc|ENSG00000140265|Q8IWY8-4|ZSCAN29	nc|ENSG00000140265|Q8IWY8-2|ZSCAN29	nc|ENSG00000140265|Q8IWY8-2|ZSCAN29	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.307373046875	3	469.955387	1406.84433	0.67214	0.00031588	-0.85201	-0.00040041	-0.17987	-8.4532E-05	469.9549790335847	16.535	0.30202	16.511	16.416	16.718	-0.024035					21	11	2	0	0	0	0.17758	1	159	159		14.779	1.8213	1	153070			55817	4419	37271	37286	63099	63099					0.15718186568165038
SRSCPNPD	8	Unmodified	_SRSCPNPD_					0	0	0			REV__ENST00000531134.5_1_12:32638990-32639023:+|nuORF	REV__ENST00000531134.5_1_12:32638990-32639023:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.5699768066406	2	438.187434	874.360315	-0.63931	-0.00028014	-4.3806	-0.0019195	-5.0199	-0.0021996	438.18538651918476	34.724	0.73305	34.668	34.355	35.088	-0.056381					24	16	2	0	0	0	0.4196	1	2195	2195		19.997	4.355	1	40810	+		55818	28296	37272	37287	63100	63100					-0.08189054978981858
SRSGVRKL	8	Unmodified	_SRSGVRKL_					0	0	0		nc|ENSG00000293505|Q96P88|GNRHR2;ENST00000361928.2_2_1:145510914-145515697:-|nuORF;ENST00000604273.1_2_1:145515140-145515565:-|nuORF;ENST00000312753.9_2_1:145510914-145515950:-|nuORF	nc|ENSG00000293505|Q96P88|GNRHR2	nc|ENSG00000293505|Q96P88|GNRHR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.77978515625	2	451.780151	901.545748	-1.2361	-0.00055844	1.193	0.00053899	-0.043068	-1.9457E-05	451.78060040496564	86.527	1.3161	86.721	86.176	87.492	0.19379					78	30	4	0	0	0	0.87479	1	8522	8522		30.504	0	1	231810			55819	15356	37273	37288	63101	63101					0.09103715602793727
SRSIAKQLQ	9	Unmodified	_SRSIAKQLQ_					0	0	0			REV__nc|ENSG00000078269|O15056-2|SYNJ2	REV__nc|ENSG00000078269|O15056-2|SYNJ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8031005859375	2	515.803823	1029.59309	0.78398	0.00040438	-0.88024	-0.00045403	-0.096256	-4.9649E-05	515.8032269783904	23.016	0.76294	22.442	22.157	22.92	-0.57415					45	18	4	0	0	0	0.065196	1	992	992		101.6	8.4052	1	679090	+		55820	16761	37274	37289	63102	63102					0.07947950083143951
SRSIFRKFLLM	11	Unmodified	_SRSIFRKFLLM_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.6080322265625	3	466.607713	1396.80131	0.32068	0.00014963	0.26876	0.0001254	0.58944	0.00027504	466.60769889886956	100.37	2.2833	100.42	99.018	101.3	0.046356					147	53	4	0	0	0	0.74405	1	10717	10717		23.378	2.3457	1	458180			55821	5249	37275	37290	63103	63103					0.11878235675862925
SRSIRSWQ	8	Unmodified	_SRSIRSWQ_					0	0	0			REV__ENSG00000185013|ENST00000304081|NT5C1B	REV__ENSG00000185013|ENST00000304081|NT5C1B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.79229736328125	2	510.27269	1018.53083	-0.17981	-9.175E-05	2.5596	0.0013061	2.3798	0.0012144	510.77766048505396	55.652	0.099659	55.625	55.559	55.659	-0.027279					4	2	2	0	0	0	0.4196	1	5079	5079		29.15	2.4566	1	13600	+		55822	22727	37276	37291	63104	63104					0.022302237348071685
SRSKLRHK	8	Unmodified	_SRSKLRHK_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|228|2|anti-sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|228|2|anti-sense	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3155212402344	2	506.312149	1010.60975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.13	1	64.161	63.661	64.661	0.030243								0	0	0	0.29508	1	5636	5636		26.693	1.1189	1		+		55823	29442	37277	37292	63105	63105					0.1048649575974423
SRSLRQSPP	9	Unmodified	_SRSLRQSPP_					0	0	0			REV__nc|ENSG00000168509|Q6ZVN8-3|HJV	REV__nc|ENSG00000168509|Q6ZVN8-3|HJV	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.7545776367188	2	514.285797	1026.55704	0.22575	0.0001161	1.8206	0.00093633	2.0464	0.0010524	514.2863786040969	55.009	0.50335	55.577	55.362	55.866	0.56836					18	11	2	0	0	0	0.20789	1	5638	5638		21.96	1.9631	1	112870	+		55824	21495	37278	37293	63106	63106					0.044824929062770025
SRSMRFLFLI	10	Unmodified	_SRSMRFLFLI_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	423.52520751953125	3	423.909392	1268.70635	0.75971	0.00032205	1.5909	0.0006744	2.3506	0.00099645	423.9100459809392	24.606	0.76738	24.278	23.891	24.658	-0.32825					37	16	3	0	0	0	0.37624	1	1174	1174		32.751	0	1	97594	+		55825	16141	37279	37294	63107	63107					0.08274302204677042
SRSNRLEELVL	11	Unmodified	_SRSNRLEELVL_					0	0	0		nc|ENSG00000079691|Q5VZK9-3|CARMIL1;nc|ENSG00000079691|Q5VZK9-2|CARMIL1;ENSG00000079691|ENST00000329474|CARMIL1;ENST00000497227.1_1_6:25466074-25472787:+|nuORF;nc|ENSG00000079691|Q5VZK9-4|CARMIL1	nc|ENSG00000079691|Q5VZK9-3|CARMIL1;nc|ENSG00000079691|Q5VZK9-4|CARMIL1	nc|ENSG00000079691|Q5VZK9-4|CARMIL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2462158203125	3	439.249131	1314.72556	0.26702	0.00011729	-0.72509	-0.0003185	-0.45807	-0.00020121	439.24863416695456	23.471	1.1082	23.09	22.686	23.794	-0.38178					64	25	4	0	0	0	0.59831	1	1085	1085		44.639	2.3014	1	584580			55826	1426;14788	37280	37295	63108	63108					0.08078930029296316
SRSPDGCPPT	10	Unmodified	_SRSPDGCPPT_					0	0	0			REV__ENSG00000188032|ENST00000548523|C19orf67	REV__ENSG00000188032|ENST00000548523|C19orf67	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.7262268066406	2	508.726923	1015.43929	0.1939	9.8643E-05	-3.3173	-0.0016876	-3.1234	-0.001589	508.72501975292585	31.802	0.7764	31.816	31.468	32.244	0.01366					40	20	3	0	0	0	0.44803	1	1741	1741		60.118	3.3972	1	172220	+		55827	22971	37281	37296	63109	63109					-0.06780827744694307
SRSPDGCPPT	10	Unmodified	_SRSPDGCPPT_					0	0	0			REV__ENSG00000188032|ENST00000548523|C19orf67	REV__ENSG00000188032|ENST00000548523|C19orf67	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.72509765625	2	508.726923	1015.43929	-0.52205	-0.00026558	-2.7391	-0.0013935	-3.2612	-0.0016591	508.72532779680637	31.839	0.73014	31.832	31.521	32.251	-0.0061455					39	16	3	0	0	0	0.42393	1	1774	1774		62.107	7.3311	1	214700	+		55828	22971	37281	37296	63110	63110					-0.06780827744694307
SRSPHKRKRN	10	Unmodified	_SRSPHKRKRN_					0	0	0		ENSG00000168566|ENST00000342415|SNRNP48	ENSG00000168566|ENST00000342415|SNRNP48	ENSG00000168566|ENST00000342415|SNRNP48	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.368408203125	2	633.368518	1264.72248	1.4675	0.00092945	-0.60218	-0.0003814	0.86529	0.00054805	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.83456	1	9851	9851		40.778	3.6191	1	5460600			55829	6413	37282	37297	63111	63111					0.10071144485800687
SRSPIRKE	8	Unmodified	_SRSPIRKE_					0	0	0			REV__ENST00000457952.5_1_2:70409910-70417362:-|nuORF	REV__ENST00000457952.5_1_2:70409910-70417362:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.8121337890625	2	486.78289	971.551228	0.50228	0.0002445	3.0845	0.0015015	3.5868	0.001746	486.7843819833448	17.545	0.28749	17.062	16.944	17.232	-0.48256					8	6	2	0	0	0	0.4196	1	289	289		24.519	5.4157	1	35697	+		55830	26975	37283	37298	63112	63112					0.06431394394621748
SRSPLRATT	9	Unmodified	_SRSPLRATT_					0	0	0		ENSG00000135837|ENST00000367607|CEP350	ENSG00000135837|ENST00000367607|CEP350	ENSG00000135837|ENST00000367607|CEP350	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7803649902344	2	494.780348	987.546142	-1.0037	-0.00049663	0.6697	0.00033135	-0.33405	-0.00016528	494.780551509218	83.839	2.5962	83.898	82.427	85.023	0.05925					126	59	3	0	0	0	0.73802	1	8326	8326		37.812	7.2427	1	265620			55831	4057	37284	37299	63113	63113					0.051870905319901794
SRSPSAATTP	10	Unmodified	_SRSPSAATTP_					0	0	0		ENST00000493635.1_1_6:36982749-36990230:+|nuORF	ENST00000493635.1_1_6:36982749-36990230:+|nuORF	ENST00000493635.1_1_6:36982749-36990230:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.7905578613281	2	487.748713	973.482873	0.97407	0.0004751	1.3555	0.00066114	2.3296	0.0011362	487.7492454872504	33.826	0.32973	34.131	33.953	34.282	0.30494					10	7	2	0	0	0	0.37624	1	2465	2465		45.972	5.1941	1	83082			55832	12733	37285	37300	63114	63114					-0.00492894975911895
SRSQVKAVL	9	Unmodified	_SRSQVKAVL_					0	0	0			REV__ENSG00000164199|ENST00000405460|ADGRV1	REV__ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.30059814453125	2	494.300916	986.587279	-0.67103	-0.00033169	0.2629	0.00012995	-0.40813	-0.00020174	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.76764	1	10408	10408		34.173	2.6427	1	54981000	+		55833	21051	37286	37301	63115	63115					0.09344851571484014
SRSRFYTVI	9	Unmodified	_SRSRFYTVI_					0	0	0		ENSG00000170091|ENST00000303177|NSG2	ENSG00000170091|ENST00000303177|NSG2	ENSG00000170091|ENST00000303177|NSG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.27197265625	2	564.811648	1127.60874	1.4989	0.00084661	-2.4237	-0.0013689	-0.92479	-0.00052233	564.8100488394539	50.57	0.4896	51.322	51.001	51.491	0.75174					20	11	2	0	0	0	0.20789	1	4969	4969		15.642	0	1	294720			55834	6560	37287	37302	63116	63116					0.050042366001889604
SRSRRGKV	8	Unmodified	_SRSRRGKV_					0	0	0		ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.57781982421875	2	473.288674	944.562795	-0.0063235	-2.9928E-06	-4.3684	-0.0020675	-4.3748	-0.0020705	473.2865782579827	33.904	0.59668	33.899	33.663	34.259	-0.0047417					20	13	2	0	0	0	0.4196	1	1994	1994		18.324	0	1	58864			55835	8983	37288	37303	63117	63117					0.0882963620862256
SRSSVIVLVF	10	Unmodified	_SRSSVIVLVF_					0	0	0		ENST00000551747.1_1_19:16652231-16653189:-|nuORF	ENST00000551747.1_1_19:16652231-16653189:-|nuORF	ENST00000551747.1_1_19:16652231-16653189:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8300170898438	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.86272	1	8678	8678		24.519	0.99649	1	1844500			55836	13673	37289	37304	63118	63118					0.10094577919812764
SRSTDKLELR	10	Unmodified	_SRSTDKLELR_					0	0	0			REV__nc|ENSG00000011426|Q9NQW6-2|ANLN	REV__nc|ENSG00000011426|Q9NQW6-2|ANLN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7054138183594	3	402.226326	1203.65715	1.6356	0.00065789	-2.4363	-0.00097993	-0.80066	-0.00032205	402.2251897022562	25.382	0.17695	25.054	24.927	25.104	-0.32825					5	3	2	0	0	0	0.37624	1	1290	1290		23.378	6.6605	1	21045	+		55837	16185	37290	37305	63119	63119					0.06346685449420875
SRSVSVRPG	9	Unmodified	_SRSVSVRPG_					0	0	0		ENST00000304920.3_1_13:21277510-21278328:+|nuORF	ENST00000304920.3_1_13:21277510-21278328:+|nuORF	ENST00000304920.3_1_13:21277510-21278328:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.76617431640625	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.76255	1	8441	8441		35.618	2.8059	1	547170			55838	9845	37291	37306	63120	63120					0.04590821360534392
SRSWHGDV	8	Unmodified	_SRSWHGDV_					0	0	0		ENST00000607746.1_1_3:107854124-107855282:+|nuORF	ENST00000607746.1_1_3:107854124-107855282:+|nuORF	ENST00000607746.1_1_3:107854124-107855282:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.223876953125	2	472.222665	942.430778	0.048074	2.2702E-05	-0.97802	-0.00046184	-0.92995	-0.00043914	472.2221629933996	38.668	0.64296	38.615	38.293	38.936	-0.052727					33	19	2	0	0	0	0.88185	1	2289	2289		32.812	4.9302	1	163440			55839	14468	37292	37307	63121	63121					-0.04274013598990223
SRSYPKQVF	9	Unmodified	_SRSYPKQVF_					0	0	0			REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	556.29638671875	2	556.298373	1110.58219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.99	1	76.037	75.537	76.537	0.046448								0	0	0	0.28386	1	7413	7413		37.159	8.0096	1		+		55840	17980	37293	37308	63122	63122					0.03132547708855782
SRTATFLD	8	Unmodified	_SRTATFLD_					0	0	0		ENST00000359197.9_1_7:50468535-50468640:+|nuORF	ENST00000359197.9_1_7:50468535-50468640:+|nuORF	ENST00000359197.9_1_7:50468535-50468640:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.7359619140625	2	455.735074	909.455596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.861	1	31.855	31.355	32.355	-0.0061455								0	0	0	0.29816	1	1770	1770		38.806	6.8513	1				55841	10423	37294	37309	63123	63123					-0.0027537851628949284
SRTCVRPG	8	Unmodified	_SRTCVRPG_					0	0	0		ENST00000344337.10_1_3:122145624-122145822:-|nuORF	ENST00000344337.10_1_3:122145624-122145822:-|nuORF	ENST00000344337.10_1_3:122145624-122145822:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26373291015625	2	438.229436	874.44432	0.30458	0.00013348	3.1776	0.0013925	3.4822	0.001526	438.2306127828225	34.821	0.43501	35.031	34.769	35.204	0.21002					16	10	3	0	0	0	0.4196	1	2593	2593		40.778	7.9657	1	321680			55842	10292	37295	37310	63124	63124					0.0020752090858877636
SRTGDQYSYS	10	Unmodified	_SRTGDQYSYS_					0	0	0		nc|ENSG00000196233|Q96JN0-2|LCOR;nc|ENSG00000196233|Q96JN0|LCOR	nc|ENSG00000196233|Q96JN0-2|LCOR	nc|ENSG00000196233|Q96JN0-2|LCOR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.2508544921875	2	582.251817	1162.48908	0.84516	0.00049209	-0.91595	-0.00053332	-0.070797	-4.1222E-05	582.2513600168936	34.842	1.6633	35.223	34.811	36.474	0.3812					134	42	4	0	0	0	0.73395	1	2601	2601		42.864	0	1	1023800			55843	15178	37296	37311	63125	63125					-0.08566421535033442
SRTGDRLR	8	Unmodified	_SRTGDRLR_					0	0	0			REV__nc|ENSG00000125735|O43557-2|TNFSF14	REV__nc|ENSG00000125735|O43557-2|TNFSF14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.7684020996094	2	480.770314	959.526075	-0.0039103	-1.8799E-06	2.7862	0.0013395	2.7823	0.0013377	480.77150529803663	40.928	0.46882	40.882	40.674	41.143	-0.045471					33	18	2	0	0	0	0.92394	1	2643	2643		47.657	1.6851	1	279370	+		55844	18664	37297	37312	63126	63126					0.04469339592048982
SRTGRSSW	8	Unmodified	_SRTGRSSW_					0	0	0		ENST00000519529.1_1_8:23104208-23115846:+|nuORF	ENST00000519529.1_1_8:23104208-23115846:+|nuORF	ENST00000519529.1_1_8:23104208-23115846:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.7358093261719	2	468.73594	935.457327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.296	1	74.341	73.841	74.841	0.04509								0	0	0	0.29264	1	7185	7185		29.15	0.89528	1				55845	13137	37298	37313	63127	63127					-0.012983247076704174
SRTILQASL	9	Unmodified	_SRTILQASL_					0	0	0		nc|ENSG00000129003|Q709C8-2|VPS13C;ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.79302978515625	2	494.792924	987.571294	0.53507	0.00026475	-0.23226	-0.00011492	0.30282	0.00014983	494.7926397196607	26.556	0.66258	26.601	26.257	26.92	0.045507					37	18	3	0	0	0	0.76853	1	1127	1127		33.922	3.6039	1	91230			55846	3570	37299	37314	63128	63128					0.07701145334567627
SRTIPTACV	9	Unmodified	_SRTIPTACV_					0	0	0		ENSG00000187323|ENST00000442544|DCC;chr18:53486952-53499298|19|22.53|0.69|5.02|+|ENST00000581580|DCC,DCC;ENST00000579702.1_1_18:51025702-51053171:+|nuORF	ENSG00000187323|ENST00000442544|DCC	ENSG00000187323|ENST00000442544|DCC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2567138671875	2	474.252577	946.490601	0.90723	0.00043026	3.4537	0.0016379	4.3609	0.0020682	474.2540659981243	22.601	1.5549	22.183	21.652	23.207	-0.41879					50	35	2	0	0	0	0.78536	1	907	907		29.15	0.89528	1	124210			55847	253	37300	37315	63129	63129					0.015215410200084989
SRTKQVVSL	9	Unmodified	_SRTKQVVSL_					0	0	0		ENST00000448567.2_1_1:211556225-211556297:+|nuORF	ENST00000448567.2_1_1:211556225-211556297:+|nuORF	ENST00000448567.2_1_1:211556225-211556297:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.3064880371094	2	509.306198	1016.59784	1.9599	0.00099817	-2.8037	-0.0014279	-0.84383	-0.00042977	509.30464157571356	93.196	1.6755	93.134	92.591	94.267	-0.06144					130	39	5	0	0	0	0.7932	1	9938	9938		19.997	0	1	3032400			55848	11860	37301	37316	63130	63130					0.09020834225896124
SRTKRKRRKHK	11	Unmodified	_SRTKRKRRKHK_					0	0	0			REV__nc|ENSG00000197579|Q9NS56-2|TOPORS	REV__nc|ENSG00000197579|Q9NS56-2|TOPORS	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.6485290527344	3	494.318436	1479.93348	0.25059	0.00012387	-0.73017	-0.00036094	-0.47958	-0.00023706	494.3181205968388	44.526	1.1359	44.503	44.176	45.312	-0.023079					37	25	2	0	0	0	0.17705	1	3506	3506		20.315	2.4819	1	169710	+		55849	23246	37302	37317	63131	63131					0.2127102152765019
SRTLLVIA	8	Unmodified	_SRTLLVIA_					0	0	0		ENST00000489009.1_1_17:16120558-16137385:+|nuORF;ENST00000607144.4_1_17:16120540-16203322:+|nuORF;nc|ENSG00000108474|Q9Y2B2-2|PIGL;ENST00000498772.6_1_17:16120540-16220082:+|nuORF;ENSG00000108474|ENST00000225609|PIGL	ENST00000489009.1_1_17:16120558-16137385:+|nuORF	ENST00000489009.1_1_17:16120558-16137385:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2677001953125	2	436.781828	871.549102	1.151	0.00050275	-2.8456	-0.0012429	-1.6946	-0.00074017	436.78056248674	50.965	1.0706	51.717	51.161	52.231	0.75174					31	25	2	0	0	0	0.4196	1	5024	5024		20.482	2.1574	1	157350			55850	2408	37303	37318	63132	63132					0.10818965656801538
SRTLWLDVLN	10	Unmodified	_SRTLWLDVLN_					0	0	0			REV__ENSG00000179796|ENST00000396641|LRRC3B	REV__ENSG00000179796|ENST00000396641|LRRC3B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.8369140625	2	608.837862	1215.66117	-0.14489	-8.8218E-05	-0.99259	-0.00060432	-1.1375	-0.00069254	608.8371154069557	110.53	1.2053	110.53	110.28	111.48	0					111	36	5	0	0	0	0.85981	1	11490	11490		35.152	2.3396	1	1502000	+		55851	22355	37304	37319	63133	63133					0.061967749431460106
SRTPRSAQS	9	Unmodified	_SRTPRSAQS_					0	0	0			REV__ENSG00000065526|ENST00000375759|SPEN	REV__ENSG00000065526|ENST00000375759|SPEN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25775146484375	2	495.259779	988.505006	-2.6631	-0.0013189	1.3062	0.00064689	-1.3569	-0.00067204	495.26028573461133	40.858	1.9733	41.25	40.867	42.841	0.39209					105	53	3	0	0	0	0.76764	1	3518	3518		34.173	2.6427	1	8396000	+		55852	16503	37305	37320	63134	63134					0.010293294925190821
SRTRLALI	8	Unmodified	_SRTRLALI_					0	0	0		ENST00000529871.1_1_11:104897559-104905036:-|nuORF;nc|ENSG00000137752|P29466-4|CASP1;nc|ENSG00000137752|P29466-3|CASP1;nc|ENSG00000137752|P29466-2|CASP1;ENSG00000137752|ENST00000533400|CASP1	ENST00000529871.1_1_11:104897559-104905036:-|nuORF	ENST00000529871.1_1_11:104897559-104905036:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.17315673828125	2	465.298176	928.581799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.646	1	64.77	64.27	65.27	0.12397								0	0	0	0.30712	1	5716	5716		49.442	15.926	1				55853	4232	37306	37321	63135	63135					0.11465172779639943
SRTRQALV	8	Unmodified	_SRTRQALV_					0	0	0		ENSG00000183034|ENST00000331427|OTOP2	ENSG00000183034|ENST00000331427|OTOP2	ENSG00000183034|ENST00000331427|OTOP2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77703857421875	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.965	1	80.101	79.601	80.601	0.13606								0	0	0	0.29245	1	7600	7600		30.504	4.9296	1				55854	7495	37307	37322	63136	63136					0.07307411740180214
SRTRSRHRA	9	Unmodified	_SRTRSRHRA_					0	0	0		ENST00000470922.5_1_22:19165453-19166237:-|nuORF	ENST00000470922.5_1_22:19165453-19166237:-|nuORF	ENST00000470922.5_1_22:19165453-19166237:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.8187255859375	2	563.818661	1125.62277	0.44054	0.00024839	-3.5953	-0.0020271	-3.1548	-0.0017787	563.8167106325166	53.732	0.9845	53.814	53.413	54.398	0.081524					36	24	2	0	0	0	0.77244	1	4407	4407		32.812	6.749	1	160630			55855	12229	37308	37323	63137	63137					0.0649832687183789
SRTRVPGR	8	Unmodified	_SRTRVPGR_					0	0	0		ENST00000592982.2_1_19:33793807-33793969:+|nuORF	ENST00000592982.2_1_19:33793807-33793969:+|nuORF	ENST00000592982.2_1_19:33793807-33793969:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2536315917969	2	464.7754	927.536246	0.87377	0.00040611	-3.2274	-0.0015	-2.3537	-0.0010939	464.77379063552075	85.618	0.43527	85.544	85.277	85.712	-0.073761					13	9	2	0	0	0	0.4196	1	8780	8780		6.3127	0	1	48333			55856	14301	37309	37324	63138	63138					0.06957947317278013
SRTSESAGAA	10	Unmodified	_SRTSESAGAA_					0	0	0			REV__ENSG00000182253|ENST00000336292|SYNM	REV__ENSG00000182253|ENST00000336292|SYNM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.72308349609375	2	468.722695	935.430838	-0.98543	-0.00046189	2.374	0.0011127	1.3885	0.00065084	468.7237063977118	87.334	1.3094	87.535	87.155	88.464	0.20115					44	30	2	0	0	0	0.8651	1	8629	8629		25.574	2.5316	1	488540	+		55857	22511	37310	37325	63139	63139					-0.039460583896698154
SRTSGKELVK	10	Unmodified	_SRTSGKELVK_					0	0	0		ENST00000580840.1_2_17:29226189-29226666:-|nuORF;ENSG00000172171|ENST00000581216|TEFM	ENST00000580840.1_2_17:29226189-29226666:-|nuORF	ENST00000580840.1_2_17:29226189-29226666:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.824462890625	2	552.822212	1103.62987	0.24223	0.00013391	3.5963	0.0019881	3.8386	0.0021221	552.8240262062169	77.847	0.71408	77.971	77.695	78.409	0.12485					57	23	3	0	0	0	0.83456	1	7338	7338		37.508	1.8899	1	625310			55858	6748	37311	37326	63140	63140					0.08220201909034586
SRTSQTQE	8	Unmodified	_SRTSQTQE_					0	0	0		nc|ENSG00000290915|Q107X0|KLKP1	nc|ENSG00000290915|Q107X0|KLKP1	nc|ENSG00000290915|Q107X0|KLKP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7237854003906	2	468.722695	935.430838	-0.58063	-0.00027215	1.1246	0.00052713	0.54398	0.00025498	468.72346030200146	77.011	2.0488	77.579	77.289	79.337	0.56836					141	50	5	0	0	0	0.87064	1	8888	8888		29.15	0.89528	1	13648000			55859	15343	37312	37327	63141	63141					-0.039460583896698154
SRTSSSQPS	9	Unmodified	_SRTSSSQPS_					0	0	0			REV__ENST00000302538.9_1_17:908779-908890:-|nuORF	REV__ENST00000302538.9_1_17:908779-908890:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232666015625	2	468.722695	935.430838	-0.54669	-0.00025625	1.9953	0.00093526	1.4486	0.00067901	468.72358850102967	75.94	0.89275	76.509	76.184	77.077	0.56836					41	22	2	0	0	0	0.78124	1	8652	8652		30.318	1.1477	1	404970	+		55860	24788	37313	37328	63142	63142					-0.03946058389658447
SRTTTRELL	9	Unmodified	_SRTTTRELL_					0	0	0			REV__nc|ENSG00000176406|Q9UQ26-3|RIMS2	REV__nc|ENSG00000176406|Q9UQ26-3|RIMS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.8067016601562	2	538.806562	1075.59857	-0.69163	-0.00037266	0.94236	0.00050775	0.25073	0.0001351	538.8070299475025	90.865	3.8094	90.865	89.559	93.368	0					216	88	3	0	0	0	0.76764	1	8824	8824		34.173	0	1	563820	+		55861	22125	37314	37329	63143	63143					0.06379628874969967
SRTTTYVE	8	Unmodified	_SRTTTYVE_					0	0	0			REV__ENST00000489614.5_1_7:30486556-30486688:-|nuORF	REV__ENST00000489614.5_1_7:30486556-30486688:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.7366943359375	2	478.737814	955.461075	-0.90022	-0.00043097	-2.4353	-0.0011659	-3.3356	-0.0015969	478.73679947267	78.748	1.2743	79.311	78.91	80.184	0.56332					63	29	3	0	0	0	0.90089	1	9026	9026		39.253	7.6186	1	1068100	+		55862	27622	37315	37330	63144	63144					-0.018436997244634767
SRTVPSRPLPV	11	Unmodified	_SRTVPSRPLPV_					0	0	0		ENST00000379561.5_1_13:41240138-41240633:-|nuORF	ENST00000379561.5_1_13:41240138-41240633:-|nuORF	ENST00000379561.5_1_13:41240138-41240633:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.57470703125	3	403.575178	1207.70371	0.92254	0.00037231	-2.2112	-0.0008924	-1.2887	-0.00052008	403.57437110018327	80.894	0.89915	81.316	80.891	81.79	0.4215					88	21	5	0	0	0	0.64964	1	9272	9272		38.714	1.2059	1	18400000			55863	10896	37316	37331	63145	63145					0.10816170071370834
SRTWALAAN	9	Unmodified	_SRTWALAAN_					0	0	0			REV__ENST00000348520.10_2_14:104178343-104178469:+|nuORF	REV__ENST00000348520.10_2_14:104178343-104178469:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25909423828125	2	495.261791	988.509028	-2.6631	-0.0013189	-2.7551	-0.0013645	-5.4182	-0.0026834	495.26028573461133	40.858	1.9733	41.25	40.867	42.841	0.39209					105	53	3	0	0	0	0.78528	1	3603	3603		29.17	1.2878	1	8396000	+		55864	25331	37317	37332	63146	63146					0.014314189862034254
SRVAGITGVCH	11	Unmodified	_SRVAGITGVCH_					0	0	0		nc|ENSG00000114904|P51957-3|NEK4;ENSG00000114904|ENST00000233027|NEK4	nc|ENSG00000114904|P51957-3|NEK4	nc|ENSG00000114904|P51957-3|NEK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.2876586914062	2	550.287482	1098.56041	-1.427	-0.00078524	1.2794	0.00070403	-0.14758	-8.1213E-05	550.2880047829314	90.476	0.88142	90.947	90.601	91.483	0.47068					54	21	3	0	0	0	0.39037	1	10735	10735		60.118	4.6141	1	2247600			55865	2798	37318	37333	63147	63147					0.015074196886416757
SRVARVRRQAP	11	Unmodified	_SRVARVRRQAP_					0	0	0			REV__ENST00000462554.2_2_20:60878367-60878463:+|nuORF	REV__ENST00000462554.2_2_20:60878367-60878463:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.5975036621094	3	432.597088	1294.76943	-0.16962	-7.3379E-05	1.4594	0.00063134	1.2898	0.00055796	432.5976970384716	106.55	1.2774	106.52	105.86	107.13	-0.025146					98	24	5	0	0	0	0.72106	1	11532	11532		19.627	0	1	15884000	+		55866	27058	37319	37334	63148	63148					0.13384004036947772
SRVARVRRQAP	11	Unmodified	_SRVARVRRQAP_					0	0	0			REV__ENST00000462554.2_2_20:60878367-60878463:+|nuORF	REV__ENST00000462554.2_2_20:60878367-60878463:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.5977478027344	3	432.597088	1294.76943	1.8145	0.00078493	-0.72897	-0.00031535	1.0855	0.00046958	432.59669589863887	105.91	1.0201	106.04	105.7	106.72	0.12742					97	40	4	0	0	0	0.75121	1	12909	12909		21.78	2.5177	1	823850	+		55867	27058	37319	37334	63149	63149					0.13384004036947772
SRVDQNRRRR	10	Unmodified	_SRVDQNRRRR_					0	0	0			REV__ENSG00000133083|ENST00000360631|DCLK1	REV__ENSG00000133083|ENST00000360631|DCLK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.30780029296875	3	448.255613	1341.74501	-0.58871	-0.00026389	1.8557	0.00083183	1.267	0.00056794	448.5920318722181	78.077	0.57629	78.482	78.263	78.839	0.40531					16	13	2	0	0	0	0.37624	1	8933	8933		17.833	13.19	1	70238	+		55868	19055	37320	37335	63150	63150					0.08780743883403375
SRVERLGQA	9	Unmodified	_SRVERLGQA_					0	0	0		ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-4|SVEP1;nc|ENSG00000165124|Q4LDE5-2|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2406311035156	2	508.285797	1014.55704	0.41225	0.00020954	2.8452	0.0014462	3.2574	0.0016557	508.2871916559541	37.344	0.49164	37.657	37.411	37.903	0.31312					16	11	2	0	0	0	0.20789	1	2993	2993		25.574	4.6271	1	80551			55869	6050	37321	37336	63151	63151					0.050344929062816846
SRVERLGQA	9	Unmodified	_SRVERLGQA_					0	0	0		ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-4|SVEP1;nc|ENSG00000165124|Q4LDE5-2|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	508.285797	1014.55704	0.24292	0.00012347	3.4822	0.0017699	3.7251	0.0018934	508.7876080430459	37.775	0.15445	37.874	37.808	37.962	0.099277	0.13191	0.00021925	NaN	19.104	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35382			55870	6050	37321	37336							0.050344929062816846
SRVHPRPG	8	Unmodified	_SRVHPRPG_					0	0	0		ENSG00000283439|ENST00000636696|SPEM3	ENSG00000283439|ENST00000636696|SPEM3	ENSG00000283439|ENST00000636696|SPEM3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.7685241699219	2	453.256843	904.499132	0.15342	6.9539E-05	-1.7017	-0.00077131	-1.5483	-0.00070177	453.2560082870358	30.335	0.52566	30.245	29.96	30.486	-0.089544					16	11	2	0	0	0	0.4196	1	1958	1958		30.504	13.799	1	101070			55871	9059	37322	37337	63152	63152					0.0430627577152336
SRVKKPGQ	8	Unmodified	_SRVKKPGQ_					0	0	0		ENSG00000183690|ENST00000420999|EFHC2	ENSG00000183690|ENST00000420999|EFHC2	ENSG00000183690|ENST00000420999|EFHC2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7545166015625	2	450.274701	898.534849	-1.565	-0.0007047	1.5638	0.00070415	-0.0012235	-5.5093E-07	450.2754221531407	81.827	1.5495	81.941	81.438	82.988	0.11426					78	35	3	0	0	0	0.4196	1	7742	7742		29.15	7.1897	1	263770			55872	7550	37323	37338	63153	63153					0.08152313228526964
SRVLGKSLGKY	11	Unmodified	_SRVLGKSLGKY_					0	0	0		ENST00000370473.4_1_1:89518656-89518746:-|nuORF	ENST00000370473.4_1_1:89518656-89518746:-|nuORF	ENST00000370473.4_1_1:89518656-89518746:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.7306518554688	2	604.361505	1206.70846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.44	1	111.49	110.99	111.99	0.049095								0	0	0	0.56276	1	13523	13523		20.837	15.279	1				55873	10637	37324	37339	63154	63154					0.113370542141638
SRVLLLLLLLP	11	Unmodified	_SRVLLLLLLLP_					0	0	0		ENSG00000174348|ENST00000312553|PODN;nc|ENSG00000174348|Q7Z5L7-2|PODN;nc|ENSG00000174348|Q7Z5L7-3|PODN;nc|ENSG00000174348|Q7Z5L7-4|PODN	ENSG00000174348|ENST00000312553|PODN	ENSG00000174348|ENST00000312553|PODN	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2895202636719	3	417.29172	1248.85333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.898	1	71.859	71.359	72.359	-0.039001								0	0	0	0.56276	1	7006	7006		8.7993	0.56423	1				55874	6926	37325	37340	63155	63155					0.23885722361296757
SRVLRAAKAK	10	Unmodified	_SRVLRAAKAK_					0	0	0			REV__ENSG00000108671|ENST00000261712|PSMD11	REV__ENSG00000108671|ENST00000261712|PSMD11	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.3571166992188	2	550.356557	1098.69856	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.008	1	23.965	23.465	24.465	-0.043221								0	0	0	0.45132	1	838	838		19.997	1.6724	1		+		55875	17726	37326	37341	63156	63156					0.1531591099940215
SRVLRRQRRLN	11	Unmodified	_SRVLRRQRRLN_					0	0	0			REV__ENSG00000092148|ENST00000399332|HECTD1	REV__ENSG00000092148|ENST00000399332|HECTD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.3028259277344	3	485.302675	1452.8862	-1.0424	-0.00050586	-1.4717	-0.00071423	-2.5141	-0.0012201	485.3011113307685	16.711	0.54544	16.629	16.421	16.966	-0.0821					43	23	3	0	0	0	0.7896	1	168	168		13.508	3.8618	1	173530	+		55876	17030	37327	37342	63157	63157					0.17786742256680554
SRVPAAPPASA	11	Unmodified	_SRVPAAPPASA_					0	0	0		nc|ENSG00000136828|Q5JS13-3|RALGPS1	nc|ENSG00000136828|Q5JS13-3|RALGPS1	nc|ENSG00000136828|Q5JS13-3|RALGPS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2806396484375	2	512.282723	1022.55089	-0.88857	-0.0004552	-1.7897	-0.00091686	-2.6783	-0.0013721	512.2817341917631	86.454	3.0125	86.454	85.618	88.63	0					129	69	2	0	0	0	0.67778	1	8373	8373		35.152	3.6222	1	265310			55877	14942	37328	37343	63158	63158					0.040519746747463614
SRVQGTKG	8	Unmodified	_SRVQGTKG_					0	0	0		chr8:42547949-42548656|13|23.92|0.02|10.0|+|2|None,SMIM19|1	chr8:42547949-42548656|13|23.92|0.02|10.0|+|2|None,SMIM19|1	chr8:42547949-42548656|13|23.92|0.02|10.0|+|2|None,SMIM19|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	416.22509765625	2	416.735409	831.456264	-1.3413	-0.00055896	3.4916	0.0014551	2.1503	0.00089612	416.73665612591356	40.395	0.68852	40.352	40.095	40.784	-0.043697					24	17	2	0	0	0	0.4196	1	2987	2987		30.504	0	1	80867			55878	520	37329	37344	63159	63159					0.033794609234291784
SRVRHSFLS	9	Unmodified	_SRVRHSFLS_					0	0	0		nc|ENSG00000161643|A6NMB1|SIGLEC16;nc|ENSG00000161640|Q96RL6-2|SIGLEC11;ENSG00000161640|ENST00000447370|SIGLEC11	nc|ENSG00000161643|A6NMB1|SIGLEC16	nc|ENSG00000161643|A6NMB1|SIGLEC16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.79931640625	2	544.801614	1087.58868	-0.15846	-8.6328E-05	-1.8993	-0.0010348	-2.0578	-0.0011211	544.8004802081173	45.113	0.87101	45.082	44.797	45.668	-0.031067					44	19	3	0	0	0	0.73802	1	3674	3674		37.812	0.30334	1	1546100			55879	5646	37330	37345	63160	63160					0.04838485660229708
SRVRKRNRKSG	11	Unmodified	_SRVRKRNRKSG_					0	0	0		ENSG00000204406|ENST00000642680|MBD5;nc|ENSG00000204406|Q9P267|MBD5	ENSG00000204406|ENST00000642680|MBD5	ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.6092224121094	3	448.607875	1342.8018	0.51142	0.00022943	2.7727	0.0012439	3.2841	0.0014733	448.60891312566025	75.185	1.0571	75.23	74.705	75.762	0.04509					87	28	4	0	0	0	0.73647	1	7271	7271		25.068	5.0373	1	364530			55880	8441	37331	37346	63161	63161					0.14410791439922832
SRVRRIPRR	9	Unmodified	_SRVRRIPRR_					0	0	0			REV__nc|ENSG00000112137|Q9C0D0-2|PHACTR1	REV__nc|ENSG00000112137|Q9C0D0-2|PHACTR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3810424804688	2	598.383971	1194.75339	-1.9026	-0.0011385	-1.7526	-0.0010487	-3.6553	-0.0021873	598.382916950216	41.981	1.3246	42.679	42.307	43.632	0.69754					74	32	4	0	0	0	0.78536	1	3724	3724		29.15	2.4566	1	1992800	+		55881	17916	37332	37347	63162	63162					0.16380342590673536
SRVRRIPRR	9	Unmodified	_SRVRRIPRR_					0	0	0			REV__nc|ENSG00000112137|Q9C0D0-2|PHACTR1	REV__nc|ENSG00000112137|Q9C0D0-2|PHACTR1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	598.383971	1194.75339	-0.16197	-9.6923E-05	-3.142	-0.0018801	-3.304	-0.0019771	598.3821996714647	42.629	1.2828	42.599	42.203	43.486	-0.029461	-0.084781	-0.0011383	NaN	29.15	60	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	179770	+		55882	17916	37332	37347							0.16380342590673536
SRVRRIPRR	9	Unmodified	_SRVRRIPRR_					0	0	0			REV__nc|ENSG00000112137|Q9C0D0-2|PHACTR1	REV__nc|ENSG00000112137|Q9C0D0-2|PHACTR1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	598.383971	1194.75339	-2.0627	-0.0012343	-1.3016	-0.00077888	-3.3643	-0.0020131	598.3830670062106	42.718	1.1728	42.718	42.242	43.414	0.00016785	0.034389	0.0010643	NaN	29.15	46	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139550	+		55883	17916	37332	37347							0.16380342590673536
SRVRRIPRR	9	Unmodified	_SRVRRIPRR_					0	0	0			REV__nc|ENSG00000112137|Q9C0D0-2|PHACTR1	REV__nc|ENSG00000112137|Q9C0D0-2|PHACTR1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	598.383971	1194.75339	0.3102	0.00018562	-3.4736	-0.0020786	-3.1634	-0.0018929	598.3821610264011	42.872	0.11059	42.822	42.749	42.859	-0.050312	0.13786	-0.0015351	NaN	29.15	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46954	+		55884	17916	37332	37347							0.16380342590673536
SRVSKKNI	8	Unmodified	_SRVSKKNI_					0	0	0		nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-2|ADAR;ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR	nc|ENSG00000160710|P55265-3|ADAR	nc|ENSG00000160710|P55265-3|ADAR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2526550292969	2	466.287808	930.561064	-1.4859	-0.00069284	1.0914	0.00050891	-0.39446	-0.00018393	466.288278339344	60.355	0.11849	60.386	60.311	60.43	0.0312					4	2	2	0	0	0	0.4196	1	5612	5612		6.3127	0	1	21803			55885	5600	37333	37348	63163	63163					0.09300582399998802
SRVSQASFWK	10	Unmodified	_SRVSQASFWK_					0	0	0		ENST00000568683.5_1_16:88764346-88764736:-|nuORF	ENST00000568683.5_1_16:88764346-88764736:-|nuORF	ENST00000568683.5_1_16:88764346-88764736:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.766845703125	2	598.314554	1194.61456	-0.31013	-0.00018556	3.4255	0.0020495	3.1154	0.001864	598.3164827633979	70.099	0.77539	70.061	69.794	70.57	-0.037865					68	40	2	0	0	0	0.73395	1	6836	6836		42.864	7.7122	1	916960			55886	13963	37334	37349	63164	63164					0.025033351118509017
SRVSSKRLDF	10	Unmodified	_SRVSSKRLDF_					0	0	0		ENST00000361113.9_1_19:11729024-11729201:+|nuORF	ENST00000361113.9_1_19:11729024-11729201:+|nuORF	ENST00000361113.9_1_19:11729024-11729201:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.8078002929688	2	597.833111	1193.65167	-0.56173	-0.00033582	0.58014	0.00034683	0.018415	1.1009E-05	598.3349927356476	112.83	0.058243	112.77	112.73	112.78	-0.067215					4	2	2	0	0	0	0.37624	1	12249	12249		20.947	5.3051	1	10292			55887	10464	37335	37350	63165	63165					0.06259006657614918
SRVSVIRN	8	Unmodified	_SRVSVIRN_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7774658203125	2	465.777608	929.540663	-0.11871	-5.5291E-05	0.041983	1.9555E-05	-0.076723	-3.5736E-05	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.88185	1	8153	8153		32.812	4.9302	1	1083800	+		55888	18791	37336	37351	63166	63166					0.07307411740191583
SRVSVIRN	8	Unmodified	_SRVSVIRN_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.77734375	2	465.777608	929.540663	-0.22002	-0.00010248	0.31699	0.00014765	0.096969	4.5166E-05	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.89962	1	9408	9408		38.806	3.1879	1	1042300	+		55889	18791	37336	37351	63167	63167					0.07307411740191583
SRVTFFLVPVT	11	Unmodified	_SRVTFFLVPVT_					0	0	0			REV__ENSG00000111371|ENST00000398637|SLC38A1	REV__ENSG00000111371|ENST00000398637|SLC38A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3689575195312	2	633.366256	1264.71796	1.4675	0.00092945	2.9702	0.0018813	4.4377	0.0028107	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.72429	1	9677	9677		24.232	0	1	5460600	+		55890	17869	37337	37352	63168	63168					0.0961882249964674
SRVTSSVFPE	10	Unmodified	_SRVTSSVFPE_					0	0	0		ENST00000368331.5_1_1:155742886-155742988:-|nuORF	ENST00000368331.5_1_1:155742886-155742988:-|nuORF	ENST00000368331.5_1_1:155742886-155742988:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7850341796875	2	554.785296	1107.55604	0.3699	0.00020521	-0.34367	-0.00019066	0.02623	1.4552E-05	554.7851771828723	57.541	0.69741	57.511	57.197	57.895	-0.029861					46	21	3	0	0	0	0.35939	1	5294	5294		67.494	7.3754	1	386890			55891	10591	37338	37353	63169	63169					0.006562337467130419
SRVVAGHGG	9	Unmodified	_SRVVAGHGG_					0	0	0		ENST00000320776.4_1_4:6717911-6717947:+|nuORF	ENST00000320776.4_1_4:6717911-6717947:+|nuORF	ENST00000320776.4_1_4:6717911-6717947:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2274475097656	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.78536	1	7166	7166		29.15	0	1	419890			55892	10030	37339	37354	63170	63170					0.015265941262441629
SRVVAGHGG	9	Unmodified	_SRVVAGHGG_					0	0	0		ENST00000320776.4_1_4:6717911-6717947:+|nuORF	ENST00000320776.4_1_4:6717911-6717947:+|nuORF	ENST00000320776.4_1_4:6717911-6717947:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2274475097656	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.76764	1	7497	7497		34.173	2.2177	1	634680			55893	10030	37339	37354	63171	63171					0.015265941262441629
SRVVFALLTT	10	Unmodified	_SRVVFALLTT_					0	0	0			REV__ENSG00000185933|ENST00000329905|CALHM1	REV__ENSG00000185933|ENST00000329905|CALHM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8300170898438	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.86763	1	9237	9237		26.693	6.6961	1	6029400	+		55894	22807	37340	37355	63172	63172					0.10094577919812764
SRVVHLVF	8	Unmodified	_SRVVHLVF_					0	0	0			REV__ENST00000397821.7_1_X:19554016-19554142:-|nuORF	REV__ENST00000397821.7_1_X:19554016-19554142:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.78521728515625	2	478.787444	955.560336	-0.42495	-0.00020346	-3.5625	-0.0017057	-3.9874	-0.0019091	478.78545742505617	92.153	2.1454	92.198	91.261	93.406	0.045448					108	50	4	0	0	0	0.89962	1	9597	9597		38.806	10.924	1	799270	+		55895	26178	37341	37356	63173	63173					0.08077787750960397
SRVVHLVF	8	Unmodified	_SRVVHLVF_					0	0	0			REV__ENST00000397821.7_1_X:19554016-19554142:-|nuORF	REV__ENST00000397821.7_1_X:19554016-19554142:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.78558349609375	2	478.787444	955.560336	-1.6841	-0.00080631	-2.2695	-0.0010866	-3.9535	-0.0018929	478.78607821108346	92.142	1.9841	92.328	91.657	93.642	0.18582					105	46	4	0	0	0	0.91005	1	9257	9257		42.474	7.2737	1	673480	+		55896	26178	37341	37356	63174	63174					0.08077787750960397
SRVVVPKES	9	Unmodified	_SRVVVPKES_					0	0	0			REV__ENSG00000169933|ENST00000675598|FRMPD4	REV__ENSG00000169933|ENST00000675598|FRMPD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.7921447753906	2	500.792924	999.571294	-0.6825	-0.00034179	0.4649	0.00023282	-0.2176	-0.00010897	500.7930650260662	32.272	0.64783	32.399	32.073	32.721	0.12643					28	14	3	0	0	0	0.44421	1	2255	2255		54.776	0	1	314220	+		55897	21618	37342	37357	63175	63175					0.07149145334574314
SRVYKLIQHKR	11	Unmodified	_SRVYKLIQHKR_					0	0	0		ENSG00000130844|ENST00000449416|ZNF331	ENSG00000130844|ENST00000449416|ZNF331	ENSG00000130844|ENST00000449416|ZNF331	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.958984375	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.79945	1	12699	12699		11.455	0	1	2577100			55898	3693	37343	37358	63176	63176					0.15574901045056322
SRWAELAV	8	Unmodified	_SRWAELAV_					0	0	0			REV__ENST00000496460.5_1_9:130494315-130497584:-|nuORF	REV__ENST00000496460.5_1_9:130494315-130497584:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2538146972656	2	466.253434	930.492316	-1.5133	-0.00070558	2.5281	0.0011787	1.0148	0.00047317	466.2545098406443	61.17	1.13	61.17	60.102	61.232	0					111	49	3	0	0	0	0.90983	1	5304	5304		42.396	6.7778	1	374960	+		55899	27751	37344	37359	63177	63177					0.024289181002814075
SRWCPRAAATL	11	Unmodified	_SRWCPRAAATL_					0	0	0		ENST00000413631.1_1_13:111590971-111591304:+|nuORF	ENST00000413631.1_1_13:111590971-111591304:+|nuORF	ENST00000413631.1_1_13:111590971-111591304:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	616.3207397460938	2	616.321857	1230.62916	0.083565	5.1503E-05	-1.3841	-0.00085307	-1.3006	-0.00080157	616.320908689201	54.117	1.5085	54.702	54.291	55.799	0.58474					54	35	2	0	0	0	0.28254	1	5533	5533		75.043	5.4157	1	3268500			55900	11353	37345	37360	63178	63178					0.02307083988330305
SRWFILLFL	9	Unmodified	_SRWFILLFL_					0	0	0			REV__ENST00000375398.6_1_10:29923707-29923890:-|nuORF	REV__ENST00000375398.6_1_10:29923707-29923890:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.856201171875	2	597.855327	1193.6961	2.1625	0.0012929	-0.71319	-0.00042638	1.4493	0.0008665	597.8546696490685	92.423	2.9286	92.359	90.439	93.367	-0.06414					206	70	4	0	0	0	0.69914	1	9827	9827		40.573	1.3198	1	2186000	+		55901	25813	37346	37361	63179	63179					0.10700062541741318
SRWFILLFL	9	Unmodified	_SRWFILLFL_					0	0	0			REV__ENST00000375398.6_1_10:29923707-29923890:-|nuORF	REV__ENST00000375398.6_1_10:29923707-29923890:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8558349609375	2	597.855327	1193.6961	-1.2963	-0.00077498	2.8163	0.0016838	1.5201	0.00090879	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.77546	1	9366	9366		31.955	1.6371	1	2401200	+		55902	25813	37346	37361	63180	63180					0.10700062541741318
SRWNPVLL	8	Unmodified	_SRWNPVLL_					0	0	0		ENST00000327473.8_1_19:4655256-4655514:+|nuORF	ENST00000327473.8_1_19:4655256-4655514:+|nuORF	ENST00000327473.8_1_19:4655256-4655514:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.7834777832031	2	492.784902	983.55525	0.18633	9.182E-05	-0.79077	-0.00038968	-0.60444	-0.00029786	492.78443648654866	46.388	1.4747	46.374	45.748	47.223	-0.013821					98	37	4	0	0	0	0.73851	1	3684	3684		65.803	0	1	3328000			55903	10087	37347	37362	63181	63181					0.06281483888335515
SRWPVLSS	8	Unmodified	_SRWPVLSS_					0	0	0		ENSG00000162972|ENST00000392290|MAIP1	ENSG00000162972|ENST00000392290|MAIP1	ENSG00000162972|ENST00000392290|MAIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.25341796875	2	466.253434	930.492316	-1.0674	-0.00049767	2.5525	0.0011901	1.4851	0.00069242	466.25448738935614	62.753	1.2055	62.867	62.283	63.488	0.11388					96	59	2	0	0	0	0.88601	1	5466	5466		34.173	3.8548	1	146310			55904	5756	37348	37363	63182	63182					0.024289181002814075
SRWRRRSDGF	10	Unmodified	_SRWRRRSDGF_					0	0	0			REV__ENST00000375457.2_2_13:113862417-113862534:-|nuORF	REV__ENST00000375457.2_2_13:113862417-113862534:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7880859375	3	441.565676	1321.6752	-0.71101	-0.00031396	3.6351	0.0016051	2.924	0.0012912	441.9007144960783	38.297	0.12117	38.639	38.537	38.658	0.34187					4	2	2	0	0	0	0.37624	1	3139	3139		17.833	0	1	21710	+		55905	25815	37349	37364	63183	63183					0.02722865214786907
SRWRVYSEL	9	Unmodified	_SRWRVYSEL_					0	0	0		ENST00000423112.2_1_9:3568872-3606712:+|nuORF	ENST00000423112.2_1_9:3568872-3606712:+|nuORF	ENST00000423112.2_1_9:3568872-3606712:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3588256835938	2	598.314554	1194.61456	-0.48495	-0.00029015	-0.13542	-8.1025E-05	-0.62037	-0.00037118	598.3141347337091	59.121	0.35282	59.674	59.456	59.809	0.55323					16	8	3	0	0	0	0.20789	1	6230	6230		13.454	0	1	255550			55906	11495	37350	37365	63184	63184					0.025033351118509017
SRWTWGSPSW	10	Unmodified	_SRWTWGSPSW_					0	0	0			REV__ENST00000417137.5_2_22:24145510-24145603:+|nuORF	REV__ENST00000417137.5_2_22:24145510-24145603:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.25823974609375	3	417.196478	1248.56761	1.2526	0.00052257	-4.2681	-0.0017806	-3.0155	-0.0012581	417.194792516643	22.81	0.54413	22.391	22.105	22.649	-0.41879					16	12	2	0	0	0	0.37624	1	962	962		12.957	0	1	25722	+		55907	26441	37351	37366	63185	63185					-0.046735244392948516
SRWVGAWWLGF	11	Unmodified	_SRWVGAWWLGF_					0	0	0		ENSG00000111700|ENST00000381545|SLCO1B3;nc|ENSG00000111700|Q9NPD5-2|SLCO1B3;nc|ENSG00000205754|G3V0H7|SLCO1B7;nc|ENSG00000257046|F5H094|SLCO1B3-SLCO1B7	ENSG00000111700|ENST00000381545|SLCO1B3	ENSG00000111700|ENST00000381545|SLCO1B3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.5650939941406	3	455.568135	1363.68258	0.52389	0.00023867	-4.0704	-0.0018544	-3.5465	-0.0016157	455.5662248064962	30.272	0.67667	30.257	29.987	30.663	-0.015167					27	16	3	0	0	0	0.75121	1	1581	1581		21.78	3.9473	1	27232			55908	2605	37352	37367	63186	63186					0.015282047625078121
SRWVLAVVP	9	Unmodified	_SRWVLAVVP_					0	0	0			REV__ENST00000506783.5_1_6:64346019-64394038:+|nuORF	REV__ENST00000506783.5_1_6:64346019-64394038:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.809326171875	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.69914	1	4472	4472		40.573	7.057	1	771120	+		55909	27896	37353	37368	63187	63187					0.0904234343945518
SRWVVRKEVA	10	Unmodified	_SRWVVRKEVA_					0	0	0		nc|ENSG00000058600|Q9NVU0-3|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;ENSG00000058600|ENST00000299853|POLR3E;ENST00000569787.1_1_16:22328322-22336592:+|nuORF	nc|ENSG00000058600|Q9NVU0-3|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.359130859375	2	615.359296	1228.70404	1.2106	0.00074497	-4.0562	-0.002496	-2.8456	-0.0017511	615.3568978915573	104.33	3.2029	104.5	103.73	106.93	0.17096					209	79	4	0	0	0	0.86348	1	11044	11044		31.53	4.4825	1	3137500			55910	13880	37354	37369	63188	63188					0.09883589791229497
SRWVVRKEVA	10	Unmodified	_SRWVVRKEVA_					0	0	0		nc|ENSG00000058600|Q9NVU0-3|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;ENSG00000058600|ENST00000299853|POLR3E;ENST00000569787.1_1_16:22328322-22336592:+|nuORF	nc|ENSG00000058600|Q9NVU0-3|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	615.3582763671875	2	615.359296	1228.70404	0.91539	0.00056329	-4.0395	-0.0024857	-3.1241	-0.0019224	615.356833413619	104.5	2.6486	104.62	104.11	106.76	0.11684					178	65	4	0	0	0	0.86348	1	11131	11131		31.53	1.2121	1	3488600			55911	13880	37354	37369	63189	63189					0.09883589791229497
SRWVVRKEVA	10	Unmodified	_SRWVVRKEVA_					0	0	0		nc|ENSG00000058600|Q9NVU0-3|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;ENSG00000058600|ENST00000299853|POLR3E;ENST00000569787.1_1_16:22328322-22336592:+|nuORF	nc|ENSG00000058600|Q9NVU0-3|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.3575439453125	2	615.359296	1228.70404	-1.2393	-0.00076262	-1.6685	-0.0010267	-2.9078	-0.0017894	615.3583728067321	104.45	3.3275	104.55	104.1	107.43	0.093857					191	81	4	0	0	0	0.86763	1	11043	11043		26.693	1.5669	1	3359300			55912	13880	37354	37369	63190	63190					0.09883589791229497
SRWWLWLG	8	Unmodified	_SRWWLWLG_					0	0	0			REV__ENST00000469543.5_1_10:17272008-17272239:+|nuORF	REV__ENST00000469543.5_1_10:17272008-17272239:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.290283203125	2	552.292894	1102.57123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.725	1	16.238	15.738	16.738	-0.48718								0	0	0	0.29568	1	168	168		35.201	1.2791	1		+		55913	27196	37355	37370	63191	63191					0.024051901252278185
SRYATLMQKDS	11	Unmodified	_SRYATLMQKDS_					0	0	0		ENSG00000171657|ENST00000302548|GPR82	ENSG00000171657|ENST00000302548|GPR82	ENSG00000171657|ENST00000302548|GPR82	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	433.2555236816406	3	433.883572	1298.62889	-0.96189	-0.00041735	-3.5728	-0.0015502	-4.5347	-0.0019675	434.21735192156183	107.31	0.24517	107.31	107.16	107.4	0					7	5	2	0	0	0	0.17432	1	11161	11161		33.039	24.632	1	69414			55914	6693	37356	37371	63192	63192					-0.008483805221658258
SRYIFLTKFRK	11	Unmodified	_SRYIFLTKFRK_					0	0	0		ENST00000487805.6_1_3:49737640-49742607:+|nuORF;ENST00000486102.5_1_3:49728598-49742525:+|nuORF;ENSG00000164068|ENST00000327697|RNF123;nc|ENSG00000164068|Q5XPI4-2|RNF123	ENST00000487805.6_1_3:49737640-49742607:+|nuORF	ENST00000487805.6_1_3:49737640-49742607:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.958740234375	3	486.957511	1457.8507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.72	1	102.76	102.26	103.26	0.043198								0	0	0	0.56276	1	11118	11118		22.562	9.0536	1				55915	5909	37357	37372	63193	63193					0.14009266956259125
SRYKYGQNNHY	11	Unmodified	_SRYKYGQNNHY_					0	0	0			REV__ENST00000325366.13_2_5:31535868-31538399:+|nuORF	REV__ENST00000325366.13_2_5:31535868-31538399:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.2218933105469	3	477.225097	1428.65346	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.364	1	25.388	24.888	25.888	0.024021								0	0	0	0.56276	1	915	915		30.569	12.736	1		+		55916	25061	37358	37373	63194	63194					-0.04371984324416189
SRYQIADE	8	Unmodified	_SRYQIADE_					0	0	0			REV__ENSG00000162341|ENST00000294309|TPCN2	REV__ENSG00000162341|ENST00000294309|TPCN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7494201660156	2	491.235439	980.456324	-0.67818	-0.00033314	-2.362	-0.0011603	-3.0401	-0.0014934	491.2341185972572	81.54	0.28227	81.966	81.837	82.12	0.42645					10	6	2	0	0	0	0.4196	1	9417	9417		29.15	2.4566	1	130240	+		55917	20805	37359	37374	63195	63195					-0.03468583867243069
SRYRTLKITK	10	Unmodified	_SRYRTLKITK_					0	0	0			REV__nc|ENSG00000101935|Q9Y4X0-4|AMMECR1	REV__nc|ENSG00000101935|Q9Y4X0-4|AMMECR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5924072265625	3	422.594461	1264.76155	-0.62547	-0.00026432	-2.6174	-0.0011061	-3.2429	-0.0013704	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.86621	1	4940	4940		26.063	6.8007	1	1069500	+		55918	17312	37360	37375	63196	63196					0.13976431996775318
SRYSQKLKKK	10	Unmodified	_SRYSQKLKKK_					0	0	0		nc|ENSG00000225830|P0DP91|ERCC6	nc|ENSG00000225830|P0DP91|ERCC6	nc|ENSG00000225830|P0DP91|ERCC6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.5926818847656	3	422.594461	1264.76155	-1.6666	-0.00070429	-1.2985	-0.00054872	-2.965	-0.001253	422.5937302034173	54.785	2.7535	54.785	53.575	56.328	0					197	88	4	0	0	0	0.86409	1	4725	4725		25.126	2.5644	1	771770			55919	15263	37361	37376	63197	63197					0.13976431996798055
SRYTVELFE	9	Unmodified	_SRYTVELFE_					0	0	0		nc|ENSG00000084693|Q8NDL9-3|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;ENSG00000084693|ENST00000360131|AGBL5	nc|ENSG00000084693|Q8NDL9-3|AGBL5	nc|ENSG00000084693|Q8NDL9-3|AGBL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.287841796875	2	572.287671	1142.56079	0.31338	0.00017934	-0.52239	-0.00029896	-0.20901	-0.00011962	572.2871473620589	53.89	0.62375	53.913	53.617	54.241	0.022537					31	15	3	0	0	0	0.21969	1	4763	4763		71.877	5.98	1	188510			55920	1522	37362	37377	63198	63198					-0.004788821105194074
SSALDPRLH	9	Unmodified	_SSALDPRLH_					0	0	0		ENST00000534871.5_1_17:8111145-8113891:-|nuORF	ENST00000534871.5_1_17:8111145-8113891:-|nuORF	ENST00000534871.5_1_17:8111145-8113891:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.2667236328125	2	498.267073	994.519593	0.9321	0.00046444	-1.2483	-0.00062196	-0.31615	-0.00015753	498.2663004331595	28.13	0.53632	27.875	27.632	28.168	-0.25465					21	12	2	0	0	0	0.20789	1	1656	1656		21.96	7.2958	1	176040			55921	13416	37363	37378	63199	63199					0.022114016406590054
SSALDPRLH	9	Unmodified	_SSALDPRLH_					0	0	0		ENST00000534871.5_1_17:8111145-8113891:-|nuORF	ENST00000534871.5_1_17:8111145-8113891:-|nuORF	ENST00000534871.5_1_17:8111145-8113891:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	498.267073	994.519593	-1.1703	-0.00058312	1.1462	0.0005711	-0.024114	-1.2015E-05	498.26747456796073	28.06	0.54717	27.963	27.752	28.299	-0.096945	0.04414	0.0010754	NaN	15.642	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	174410			55922	13416	37363	37378							0.022114016406590054
SSALPGPPL	9	Unmodified	_SSALPGPPL_					0	0	0		ENSG00000197496|ENST00000359271|SLC2A10	ENSG00000197496|ENST00000359271|SLC2A10	ENSG00000197496|ENST00000359271|SLC2A10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.1842956542969	2	419.737086	837.459619	-1.7825	-0.00074817	-2.267	-0.00095153	-4.0495	-0.0016997	419.73655732392456	87.019	0.81417	87.212	86.764	87.578	0.19379					27	18	2	0	0	0	0.20789	1	8606	8606		12.207	0	1	109920			55923	8170	37364	37379	63200	63200					0.03438710977422943
SSALSHHS	8	Unmodified	_SSALSHHS_					0	0	0			REV__ENST00000478247.1_1_3:183882805-183888540:+|nuORF	REV__ENST00000478247.1_1_3:183882805-183888540:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.18218994140625	2	413.196116	824.37768	1.4426	0.0005961	0.0056728	2.344E-06	1.4483	0.00059844	413.1960472952641	98.428	0.82201	98.804	98.246	99.068	0.37679					23	19	2	0	0	0	0.4196	1	11840	11840		6.7355	0	1	106870	+		55924	20762	37365	37380	63201	63201					-0.0415339138166928
SSAMEVSL	8	Unmodified	_SSAMEVSL_					0	0	0			REV__nc|ENSG00000104517|O95071-2|UBR5	REV__nc|ENSG00000104517|O95071-2|UBR5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1939697265625	2	412.196936	822.379319	-1.8306	-0.00075456	2.1185	0.00087325	0.28796	0.00011869	412.1981020811514	78.884	0.20442	79.011	78.955	79.159	0.12695					8	5	2	0	0	0	0.4196	1	7466	7466		25.45	17.219	1	56747	+		55925	17461	37366	37381	63202	63202					-0.038975184079276914
SSANGRKL	8	Unmodified	_SSANGRKL_					0	0	0			REV__ENST00000391835.1_1_19:50380997-50381111:-|nuORF	REV__ENST00000391835.1_1_19:50380997-50381111:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.7370300292969	2	416.735409	831.456264	0.14193	5.9149E-05	4.4371	0.0018491	4.5791	0.0019083	416.73684580104924	35.114	0.41824	35.22	34.989	35.407	0.10604					33	13	4	0	0	0	0.86288	1	1820	1820		26.796	3.7536	1	508040	+		55926	26005	37367	37382	63203	63203					0.03379460923406441
SSAPAGGLCC	10	Unmodified	_SSAPAGGLCC_					0	0	0		ENST00000567998.5_1_16:28618321-28618456:-|nuORF	ENST00000567998.5_1_16:28618321-28618456:-|nuORF	ENST00000567998.5_1_16:28618321-28618456:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.24664306640625	2	433.180763	864.346973	1.7449	0.00075588	-2.2439	-0.00097201	-0.49895	-0.00021613	433.1801745030689	98.344	0.86302	98.721	98.205	99.068	0.37679					44	20	3	0	0	0	0.37624	1	11895	11895		20.947	2.6225	1	563270			55927	13954	37368	37383	63204	63204					-0.09062629082575313
SSAPFLPSSG	10	Unmodified	_SSAPFLPSSG_					0	0	0			REV__ENST00000418273.2_1_10:88730792-88730906:-|nuORF	REV__ENST00000418273.2_1_10:88730792-88730906:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	475.27801513671875	2	475.234907	948.455261	-0.6467	-0.00030733	4.2556	0.0020224	3.6089	0.0017151	475.2367921730448	58.848	0.37675	59.24	59.066	59.443	0.39209					11	8	2	0	0	0	0.37624	1	6169	6169		31.53	1.0262	1	119290	+		55928	26457	37369	37384	63205	63205					-0.021027982361374598
SSAPPQDH	8	Unmodified	_SSAPPQDH_					0	0	0		ENSG00000156886|ENST00000389202|ITGAD	ENSG00000156886|ENST00000389202|ITGAD	ENSG00000156886|ENST00000389202|ITGAD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.184326171875	2	419.688124	837.361695	2.103	0.00088262	-4.2398	-0.0017794	-2.1367	-0.00089676	419.6844599624512	100.87	0.76357	101.17	100.65	101.41	0.2999					26	18	2	0	0	0	0.4196	1	12146	12146		24.203	0	1	79964			55929	5400	37370	37385	63206	63206					-0.06349097618567612
SSAPQERRLDP	11	Unmodified	_SSAPQERRLDP_					0	0	0		nc|ENSG00000278848|Q9ULZ0-3|TP53TG3	nc|ENSG00000278848|Q9ULZ0-3|TP53TG3	nc|ENSG00000278848|Q9ULZ0-3|TP53TG3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.2508239746094	3	419.217831	1254.63166	1.0401	0.00043604	-0.12701	-5.3246E-05	0.91312	0.0003828	419.21902066861566	23.935	0.21461	23.554	23.449	23.663	-0.38178					6	4	2	0	0	0	0.17882	1	1103	1103		7.6794	3.5965	1	18685			55930	15319	37371	37386	63207	63207					0.014532109269794091
SSAPSKSH	8	Unmodified	_SSAPSKSH_					0	0	0			REV__ENSG00000079308|ENST00000682258|TNS1	REV__ENSG00000079308|ENST00000682258|TNS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.20050048828125	2	400.698492	799.382431	-1.2285	-0.00049227	-0.88214	-0.00035347	-2.1107	-0.00084575	400.69809742794354	68.275	0.29702	68.334	68.165	68.462	0.05928					14	9	2	0	0	0	0.4196	1	6119	6119		17.365	0	1	60939	+		55931	16779	37372	37387	63208	63208					-0.025285072389010566
SSARAIVF	8	Unmodified	_SSARAIVF_					0	0	0		ENSG00000144867|ENST00000678299|SRPRB	ENSG00000144867|ENST00000678299|SRPRB	ENSG00000144867|ENST00000678299|SRPRB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.77490234375	2	425.742702	849.470852	0.064295	2.7373E-05	1.7228	0.00073348	1.7871	0.00076085	425.74457837732643	39.239	0.3815	39.209	38.941	39.322	-0.03027					11	8	2	0	0	0	0.4196	1	2695	2695		47.916	15.961	1	30419			55932	4740	37373	37388	63209	63209					0.04009533071575788
SSARAIVF	8	Unmodified	_SSARAIVF_					0	0	0		ENSG00000144867|ENST00000678299|SRPRB	ENSG00000144867|ENST00000678299|SRPRB	ENSG00000144867|ENST00000678299|SRPRB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.7747497558594	2	425.742702	849.470852	0.17655	7.5166E-05	-3.4035	-0.001449	-3.227	-0.0013739	425.7409316496217	38.992	0.46804	39.08	38.786	39.255	0.088371					18	12	2	0	0	0	0.4196	1	2321	2321		45.952	15.448	1	92611			55933	4740	37373	37388	63210	63210					0.04009533071575788
SSASGSFLL	9	Unmodified	_SSASGSFLL_					0	0	0		ENSG00000142235|ENST00000600059|LMTK3	ENSG00000142235|ENST00000600059|LMTK3	ENSG00000142235|ENST00000600059|LMTK3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2515869140625	2	434.724175	867.433798	-1.5734	-0.00068399	-3.2596	-0.001417	-4.833	-0.002101	434.7224377645444	78.691	0.18681	78.818	78.698	78.885	0.12695					6	4	2	0	0	0	0.20789	1	7424	7424		23.042	0	1	18118			55934	4554	37374	37389	63211	63211					-0.005221832648544478
SSASLLKLPF	10	Unmodified	_SSASLLKLPF_					0	0	0			REV__ENSG00000185775|ENST00000332857|SPATA31A6	REV__ENSG00000185775|ENST00000332857|SPATA31A6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.3776245117188	2	531.813325	1061.6121	-0.26929	-0.00014321	1.1521	0.00061271	0.88283	0.0004695	531.8136695776134	69.986	0.4998	70.533	70.383	70.883	0.54693					18	12	2	0	0	0	0.82886	1	7780	7780		37.812	2.1932	1	119150	+		55935	22791	37375	37390	63212	63212					0.08375486654176711
SSASLLKLPF	10	Unmodified	_SSASLLKLPF_					0	0	0			REV__ENSG00000185775|ENST00000332857|SPATA31A6	REV__ENSG00000185775|ENST00000332857|SPATA31A6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	531.813325	1061.6121	0.23596	0.00012549	0.30881	0.00016423	0.54476	0.00028971	531.8133057232415	70.015	0.44072	70.4	70.268	70.709	0.38416	-0.066679	-0.00037652	NaN	37.812	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149810	+		55936	22791	37375	37390							0.08375486654176711
SSASLLKLPF	10	Unmodified	_SSASLLKLPF_					0	0	0			REV__ENSG00000185775|ENST00000332857|SPATA31A6	REV__ENSG00000185775|ENST00000332857|SPATA31A6	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	531.813325	1061.6121	-0.26929	-0.00014321	1.1521	0.00061271	0.88283	0.0004695	531.8136695776134	69.986	0.4998	70.533	70.383	70.883	0.54693	0.066679	0.00052045	NaN	37.812	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119150	+		55937	22791	37375	37390							0.08375486654176711
SSASYGVQPT	10	Unmodified	_SSASYGVQPT_					0	0	0			REV__ENSG00000057468|ENST00000263187|MSH4	REV__ENSG00000057468|ENST00000263187|MSH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.7389221191406	2	498.735271	995.45599	-0.6753	-0.00033679	4.1509	0.0020702	3.4756	0.0017334	498.737218754687	21.338	0.6845	21.274	20.792	21.477	-0.064058					44	30	2	0	0	0	0.86218	1	574	574		32.812	0.85756	1	58211	+		55938	16427	37376	37391	63213	63213					-0.04192003587081672
SSAVGKSDW	9	Unmodified	_SSAVGKSDW_					0	0	0		ENST00000435422.7_1_5:155754039-155754120:+|nuORF	ENST00000435422.7_1_5:155754039-155754120:+|nuORF	ENST00000435422.7_1_5:155754039-155754120:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.72344970703125	2	468.724707	935.43486	-0.58063	-0.00027215	-3.1666	-0.0014842	-3.7472	-0.0017564	468.72346030200146	77.011	2.0488	77.579	77.289	79.337	0.56836					141	50	5	0	0	0	0.78124	1	8856	8856		30.318	1.1477	1	13648000			55939	11709	37377	37392	63214	63214					-0.03543968895951366
SSAVIKKA	8	Unmodified	_SSAVIKKA_					0	0	0			REV__ENSG00000116539|ENST00000392403|ASH1L	REV__ENSG00000116539|ENST00000392403|ASH1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.2525939941406	2	402.252903	802.491253	-0.22147	-8.9087E-05	-0.38186	-0.00015361	-0.60333	-0.00024269	402.25258747352945	21.915	0.79237	21.3	21.026	21.818	-0.61571					42	19	3	0	0	0	0.85277	1	856	856		25.45	4.9683	1	589950	+		55940	18201	37378	37393	63215	63215					0.0821070373136763
SSAVRTRK	8	Unmodified	_SSAVRTRK_					0	0	0			REV__nc|ENSG00000205176|Q8IX06|REXO1L1P	REV__nc|ENSG00000205176|Q8IX06|REXO1L1P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.7685241699219	2	452.769783	903.525013	0.29423	0.00013322	-2.9861	-0.001352	-2.6919	-0.0012188	452.76829397496084	30.028	2.0344	29.938	28.887	30.921	-0.089544					86	46	3	0	0	0	0.86677	1	1958	1958		27.882	5.9224	1	1023800	+		55941	30169	37379	37394	63216	63216					0.0693912522312985
SSAYTVEAVM	10	Unmodified	_SSAYTVEAVM_					0	0	0		ENSG00000215218|ENST00000399816|UBE2QL1	ENSG00000215218|ENST00000399816|UBE2QL1	ENSG00000215218|ENST00000399816|UBE2QL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.3222045898438	2	529.247157	1056.47976	-0.10631	-5.6262E-05	-1.3243	-0.0007009	-1.4306	-0.00075717	529.246328060371	69.74	1.064	70.287	70.101	71.165	0.54693					42	27	2	0	0	0	0.37624	1	7761	7761		39.253	0	1	250300			55942	8649	37380	37395	63217	63217					-0.04621906144939203
SSCRALVPD	9	Unmodified	_SSCRALVPD_					0	0	0		ENSG00000253276|ENST00000523505|CCDC71L	ENSG00000253276|ENST00000523505|CCDC71L	ENSG00000253276|ENST00000523505|CCDC71L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2344055175781	2	474.234384	946.454216	-0.78771	-0.00037356	1.078	0.0005112	0.29025	0.00013764	474.23486716056846	19.889	1.8268	19.259	18.666	20.493	-0.62961					53	41	2	0	0	0	0.78536	1	593	593		29.15	2.3535	1	102420			55943	8855	37381	37396	63218	63218					-0.021153358766923702
SSDAHTSYY	9	Unmodified	_SSDAHTSYY_					0	0	0		nc|ENSG00000100242|Q9UH99-3|SUN2;ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	515.7092895507812	2	515.709254	1029.40395	0.33636	0.00017346	-0.35104	-0.00018103	-0.014682	-7.5714E-06	515.7089237116219	29.849	0.9094	29.874	29.538	30.447	0.025013					58	23	4	0	0	0	0.28875	1	1509	1509		65.803	12.452	1	300030			55944	14812	37382	37397	63219	63219					-0.10957167000856316
SSDAHTSYY	9	Unmodified	_SSDAHTSYY_					0	0	0		nc|ENSG00000100242|Q9UH99-3|SUN2;ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	515.7086181640625	2	515.709254	1029.40395	0.3793	0.00019561	-0.45136	-0.00023277	-0.07206	-3.7162E-05	515.708926489124	30.012	0.98	29.997	29.601	30.581	-0.015167					58	23	4	0	0	0	0.22631	1	1548	1548		71.296	25.344	1	333030			55945	14812	37382	37397	63220	63220					-0.10957167000856316
SSDEDLEI	8	Unmodified	_SSDEDLEI_					0	0	0		nc|ENSG00000114757|Q8IYB4-3|PEX5L;ENSG00000114757|ENST00000467460|PEX5L	nc|ENSG00000114757|Q8IYB4-3|PEX5L	nc|ENSG00000114757|Q8IYB4-3|PEX5L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.7335205078125	2	454.198187	906.381822	-0.30581	-0.0001389	2.6556	0.0012062	2.3498	0.0010673	454.1995081753007	28.227	0.46787	28.187	27.926	28.394	-0.039907					11	9	2	0	0	0	0.4196	1	1417	1417		17.365	0	1	16692			55946	2789	37383	37398	63221	63221					-0.0751139146927926
SSDNATLTHY	10	Unmodified	_SSDNATLTHY_					0	0	0		ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.749267578125	2	554.74891	1107.48327	-0.79386	-0.00044039	0.64276	0.00035657	-0.15109	-8.382E-05	554.7492422452762	35.727	0.59364	35.715	35.426	36.02	-0.012199					32	12	3	0	0	0	0.025248	3	2237	2227;2237;2249		117.81	62.727	1	219160			55947	2388	37384	37399	63222;63223;63224	63223					-0.06617520046711434
SSDNATLTHY	10	Unmodified	_SSDNATLTHY_					0	0	0		ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7485961914062	2	554.74891	1107.48327	-0.20567	-0.00011409	0.10773	5.9763E-05	-0.097939	-5.4332E-05	554.7487961988535	35.784	0.72814	35.728	35.427	36.155	-0.055904					39	15	4	0	0	0	0.025248	3	2340	2329;2340;2353		117.81	57.644	1	293720			55948	2388	37384	37399	63225;63226;63227	63226					-0.06617520046711434
SSDNATLTHY	10	Unmodified	_SSDNATLTHY_					0	0	0		ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.7487182617188	2	554.74891	1107.48327	-0.50925	-0.00028251	0.29367	0.00016291	-0.21558	-0.00011959	554.7489661631395	35.684	0.73286	35.694	35.34	36.073	0.0092773					36	15	3	0	0	0	0.0037703	3	2263	2253;2263;2274		136.27	58.951	1	225980			55949	2388	37384	37399	63228;63229;63230	63229					-0.06617520046711434
SSDPDQLVY	9	Unmodified	_SSDPDQLVY_					0	0	0		nc|ENSG00000135424|Q13683-9|ITGA7;ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683|ITGA7;ENST00000553276.1_1_12:56093317-56093771:-|nuORF	nc|ENSG00000135424|Q13683-9|ITGA7	nc|ENSG00000135424|Q13683-9|ITGA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2345581054688	2	512.235104	1022.45566	-0.047414	-2.4287E-05	-0.2067	-0.00010588	-0.25411	-0.00013016	512.2348746592111	58.375	1.001	58.361	57.946	58.947	-0.013641					89	34	4	0	0	0	0.58668	2	5340	5321;5340		47.657	3.7497	1	1104700			55950	4017	37385	37400	63231;63232	63232					-0.05467423306959063
SSDPDQLVY	9	Unmodified	_SSDPDQLVY_					0	0	0		nc|ENSG00000135424|Q13683-9|ITGA7;ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683|ITGA7;ENST00000553276.1_1_12:56093317-56093771:-|nuORF	nc|ENSG00000135424|Q13683-9|ITGA7	nc|ENSG00000135424|Q13683-9|ITGA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2347412109375	2	512.235104	1022.45566	0.21698	0.00011114	-0.34707	-0.00017778	-0.13009	-6.6637E-05	512.2348050225129	58.353	1.0465	58.323	57.938	58.985	-0.030159					76	31	4	0	0	0	0.38563	3	5435	5416;5427;5435		58.782	12.83	1	1335200			55951	4017	37385	37400	63233;63234;63235	63235					-0.05467423306959063
SSDPDQLVY	9	Unmodified	_SSDPDQLVY_					0	0	0		nc|ENSG00000135424|Q13683-9|ITGA7;ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683|ITGA7;ENST00000553276.1_1_12:56093317-56093771:-|nuORF	nc|ENSG00000135424|Q13683-9|ITGA7	nc|ENSG00000135424|Q13683-9|ITGA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2344360351562	2	512.235104	1022.45566	-1.0242	-0.00052464	0.80939	0.0004146	-0.21483	-0.00011004	512.2354118058422	58.286	0.91768	58.32	57.951	58.869	0.033905					83	29	4	0	0	0	0.14386	3	5337	5328;5337;5354		84.916	31.564	1	1356000			55952	4017	37385	37400	63236;63237;63238	63237					-0.05467423306959063
SSDPDQLVY	9	Unmodified	_SSDPDQLVY_					0	0	0		nc|ENSG00000135424|Q13683-9|ITGA7;ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683|ITGA7;ENST00000553276.1_1_12:56093317-56093771:-|nuORF	nc|ENSG00000135424|Q13683-9|ITGA7	nc|ENSG00000135424|Q13683-9|ITGA7	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	512.235104	1022.45566	-0.39452	-0.00020208	0.20826	0.00010668	-0.18625	-9.5404E-05	512.2351504796475	58.333	0.59759	58.42	58.142	58.74	0.087002	0.074905	0.00030127	NaN	84.916	56	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	306820			55953	4017	37385	37400							-0.05467423306959063
SSDPDQLVY	9	Unmodified	_SSDPDQLVY_					0	0	0		nc|ENSG00000135424|Q13683-9|ITGA7;ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683|ITGA7;ENST00000553276.1_1_12:56093317-56093771:-|nuORF	nc|ENSG00000135424|Q13683-9|ITGA7	nc|ENSG00000135424|Q13683-9|ITGA7	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	512.235104	1022.45566	0.4317	0.00022113	-0.62663	-0.00032098	-0.19493	-9.9852E-05	512.2345703590382	58.236	0.58418	58.346	58.107	58.691	0.11027	0.0010236	-0.00055406	NaN	84.916	63	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	361280			55954	4017	37385	37400							-0.05467423306959063
SSDPDQLVY	9	Unmodified	_SSDPDQLVY_					0	0	0		nc|ENSG00000135424|Q13683-9|ITGA7;ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683|ITGA7;ENST00000553276.1_1_12:56093317-56093771:-|nuORF	nc|ENSG00000135424|Q13683-9|ITGA7	nc|ENSG00000135424|Q13683-9|ITGA7	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	512.235104	1022.45566	-0.52191	-0.00026734	0.3682	0.0001886	-0.15371	-7.8738E-05	512.235143012012	58.32	0.57015	58.312	58.082	58.652	-0.0074387	-0.032986	0.00046512	NaN	84.916	51	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	270420			55955	4017	37385	37400							-0.05467423306959063
SSDPDQLVY	9	Unmodified	_SSDPDQLVY_					0	0	0		nc|ENSG00000135424|Q13683-9|ITGA7;ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683|ITGA7;ENST00000553276.1_1_12:56093317-56093771:-|nuORF	nc|ENSG00000135424|Q13683-9|ITGA7	nc|ENSG00000135424|Q13683-9|ITGA7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	512.235104	1022.45566	-0.82668	-0.00042345	-1.9384	-0.00099293	-2.7651	-0.0014164	512.2340031962482	57.927	0.69501	58.321	58.043	58.738	0.39407	-0.023857	-0.0018979	NaN	84.916	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	321450			55956	4017	37385	37400							-0.05467423306959063
SSDPDQLVY	9	Unmodified	_SSDPDQLVY_					0	0	0		nc|ENSG00000135424|Q13683-9|ITGA7;ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683|ITGA7;ENST00000553276.1_1_12:56093317-56093771:-|nuORF	nc|ENSG00000135424|Q13683-9|ITGA7	nc|ENSG00000135424|Q13683-9|ITGA7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	512.235104	1022.45566	0.79106	0.00040521	-3.6837	-0.0018869	-2.8927	-0.0014817	512.2330528359845	57.805	0.64033	58.358	58.039	58.679	0.55323	0.012848	-0.003686	NaN	84.916	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	342960			55957	4017	37385	37400							-0.05467423306959063
SSDPYHSGY	9	Unmodified	_SSDPYHSGY_					0	0	0		nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT	nc|ENSG00000087087|Q9BXP5-4|SRRT	nc|ENSG00000087087|Q9BXP5-4|SRRT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7043762207031	2	506.703971	1011.39339	-0.10685	-5.4142E-05	-0.21594	-0.00010942	-0.32279	-0.00016356	506.70381889951756	32.633	0.57901	32.579	32.357	32.936	-0.054337					21	12	2	0	0	0	0.62081	1	1927	1927		45.952	3.5558	1	55447			55958	1566	37386	37401	63239	63239					-0.11185149655273108
SSELFTLTY	9	Unmodified	_SSELFTLTY_					0	0	0		ENSG00000054116|ENST00000373166|TRAPPC3;ENST00000497251.1_1_1:36605278-36614725:-|nuORF	ENSG00000054116|ENST00000373166|TRAPPC3	ENSG00000054116|ENST00000373166|TRAPPC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.762939453125	2	530.763497	1059.51244	-0.034333	-1.8223E-05	-0.12862	-6.8268E-05	-0.16296	-8.6491E-05	530.7633158062315	84.924	1.0919	84.991	84.549	85.641	0.067177					68	24	4	0	0	0	0.073112	2	8489	8489;8502		99.375	53.423	1	968200			55959	1014	37387	37402	63240;63241	63240					-0.014933757504195455
SSELFTLTY	9	Unmodified	_SSELFTLTY_					0	0	0		ENSG00000054116|ENST00000373166|TRAPPC3;ENST00000497251.1_1_1:36605278-36614725:-|nuORF	ENSG00000054116|ENST00000373166|TRAPPC3	ENSG00000054116|ENST00000373166|TRAPPC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.763427734375	2	530.763497	1059.51244	1.3815	0.00073326	-1.5093	-0.00080108	-0.12778	-6.7819E-05	530.7625919699369	85.007	1.1724	84.935	84.585	85.758	-0.07196					64	26	4	0	0	0	0.14386	4	8718	8696;8707;8718;8732		84.916	42.441	1	1089700			55960	1014	37387	37402	63242;63243;63244;63245	63244					-0.014933757504195455
SSELFTLTY	9	Unmodified	_SSELFTLTY_					0	0	0		ENSG00000054116|ENST00000373166|TRAPPC3;ENST00000497251.1_1_1:36605278-36614725:-|nuORF	ENSG00000054116|ENST00000373166|TRAPPC3	ENSG00000054116|ENST00000373166|TRAPPC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.7630615234375	2	530.763497	1059.51244	0.9261	0.00049154	-1.166	-0.0006189	-0.23994	-0.00012735	530.7628128074444	84.807	1.0024	84.866	84.5	85.503	0.05925					66	22	4	0	0	0	0.18601	4	8569	8558;8569;8580;8594		76.774	35.996	1	1058700			55961	1014	37387	37402	63246;63247;63248;63249	63247					-0.014933757504195455
SSFSYMME	8	Unmodified	_SSFSYMME_					0	0	0			REV__ENSG00000250120|ENST00000307360|PCDHA10	REV__ENSG00000250120|ENST00000307360|PCDHA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.18426513671875	2	491.188254	980.361955	-1.1534	-0.00056653	-4.3036	-0.0021139	-5.4569	-0.0026804	491.18602985671697	74.119	0.82298	74.205	73.877	74.7	0.085907					65	36	2	0	0	0	0.84341	1	6841	6841		24.203	3.7209	1	232930	+		55962	23869	37388	37403	63250	63250					-0.12901182005236933
SSGEPAYT	8	Unmodified	_SSGEPAYT_					0	0	0		ENST00000164227.9_1_19:45252055-45254595:+|nuORF	ENST00000164227.9_1_19:45252055-45254595:+|nuORF	ENST00000164227.9_1_19:45252055-45254595:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.1756896972656	2	406.177058	810.339563	0.30537	0.00012404	-2.6747	-0.0010864	-2.3693	-0.00096235	406.17587455493447	95.496	1.4528	95.915	95.061	96.514	0.41964					68	35	2	0	0	0	0.884	1	11487	11487		33.516	0	1	1268100			55963	9081	37389	37404	63251	63251					-0.07319322087005276
SSGFKWVC	8	Unmodified	_SSGFKWVC_					0	0	0		ENST00000568395.1_1_16:2721378-2721618:-|nuORF	ENST00000568395.1_1_16:2721378-2721618:-|nuORF	ENST00000568395.1_1_16:2721378-2721618:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26397705078125	2	457.215463	912.416374	-1.5499	-0.00070862	0.70133	0.00032066	-0.84852	-0.00038796	457.21542797315885	82.176	0.21791	82.302	82.149	82.367	0.12601					5	4	2	0	0	0	0.4196	1	7853	7853		21.96	0	1	14635			55964	13961	37390	37405	63252	63252					-0.04333802071505488
SSGIKALSL	9	Unmodified	_SSGIKALSL_					0	0	0		ENST00000467157.1_1_3:122880519-122880804:+|nuORF	ENST00000467157.1_1_3:122880519-122880804:+|nuORF	ENST00000467157.1_1_3:122880519-122880804:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2636413574219	2	438.263468	874.512382	-1.813	-0.00079458	0.8177	0.00035837	-0.99533	-0.00043622	438.2643530101969	113.14	0.18676	113.1	113.04	113.22	-0.032333					11	4	3	0	0	0	0.7932	1	12076	12076		21.96	0	1	1250900			55965	12149	37391	37406	63253	63253					0.07010669040232642
SSGLHRLPG	9	Unmodified	_SSGLHRLPG_					0	0	0			REV__ENST00000307630.4_1_7:75959536-75988336:-|nuORF	REV__ENST00000307630.4_1_7:75959536-75988336:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	462.2554931640625	2	462.256508	922.498464	-1.6815	-0.00077729	-0.11741	-5.4273E-05	-1.7989	-0.00083157	462.25621077069724	50.777	1.0795	50.777	50.38	51.46	0					48	27	3	0	0	0	0.77696	1	4065	4065		31.53	3.6476	1	317310	+		55966	24848	37392	37407	63254	63254					0.03411436331816731
SSGLRRWPGAI	11	Unmodified	_SSGLRRWPGAI_					0	0	0			REV__ENST00000264122.8_1_3:105572504-105586306:-|nuORF	REV__ENST00000264122.8_1_3:105572504-105586306:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.55853271484375	3	400.55964	1198.65709	-0.4013	-0.00016075	-2.4522	-0.00098224	-2.8535	-0.001143	400.55857592859013	19.576	0.65935	19.502	19.226	19.886	-0.073704					41	18	3	0	0	0	0.60058	1	433	433		38.714	0	1	413560	+		55967	24465	37393	37408	63255	63255					0.06570730240105149
SSGLSVVKV	9	Unmodified	_SSGLSVVKV_					0	0	0		nc|ENSG00000100888|Q9HCK8-2|CHD8;ENSG00000100888|ENST00000646647|CHD8	nc|ENSG00000100888|Q9HCK8-2|CHD8	nc|ENSG00000100888|Q9HCK8-2|CHD8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633361816406	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.77266	1	2590	2590		32.751	0.79567	1	2862500			55968	1879	37394	37409	63256	63256					0.07010669040244011
SSGPEPSY	8	Unmodified	_SSGPEPSY_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.1756286621094	2	412.177058	822.339563	-1.9151	-0.00078935	-2.2103	-0.00091105	-4.1254	-0.0017004	412.1764543351216	94.772	2.5614	94.974	94.403	96.965	0.20242					141	60	6	0	0	0	0.884	1	9694	9694		33.516	0	1	13873000			55969	2287	37395	37410	63257	63257					-0.07871322086998589
SSGPMAPQGH	10	Unmodified	_SSGPMAPQGH_					0	0	0			REV__nc|ENSG00000124920|Q9Y2G1-2|MYRF	REV__nc|ENSG00000124920|Q9Y2G1-2|MYRF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7188720703125	2	484.716359	967.418164	1.7202	0.00083382	1.1811	0.00057251	2.9014	0.0014063	484.71724999015095	100.07	1.5114	100.41	100.06	101.57	0.33295					128	39	5	0	0	0	0.6116	2	12084	12084;12095		49.442	3.4896	1	10028000	+		55970	18622	37396	37411	63258;63259	63258					-0.06684793053545945
SSGPPPLPKP	10	Unmodified	_SSGPPPLPKP_					0	0	0			REV__nc|ENSG00000187764|Q92854-2|SEMA4D	REV__nc|ENSG00000187764|Q92854-2|SEMA4D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	488.7772216796875	2	488.776742	975.538931	0.35321	0.00017264	0.70248	0.00034336	1.0557	0.000516	488.77668930449875	80.457	1.0349	80.397	80.23	81.265	-0.059692					37	26	2	0	0	0	0.86348	1	8080	8080		31.53	2.3803	1	128130	+		55971	30113	37397	37412	63260	63260					0.050183579315557836
SSGRPLRRNPE	11	Unmodified	_SSGRPLRRNPE_					0	0	0		ENST00000546567.5_2_12:58158304-58159309:-|nuORF;ENST00000547451.1_1_12:58158414-58159309:-|nuORF;ENST00000228606.8_1_12:58158304-58160873:-|nuORF;ENST00000547344.5_1_12:58159078-58160873:-|nuORF	ENST00000546567.5_2_12:58158304-58159309:-|nuORF	ENST00000546567.5_2_12:58158304-58159309:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8927612304688	2	634.844542	1267.67453	1.4967	0.00095018	0.73052	0.00046377	2.2272	0.0014139	634.8457544872608	105.41	0.22406	105.57	105.36	105.58	0.15924					8	5	2	0	0	0	0.17457	1	11226	11226		35.152	0	1	269730			55972	9206	37398	37413	63261	63261					0.0514002577510837
SSGTTGTGSG	10	Unmodified	_SSGTTGTGSG_					0	0	0			REV__ENSG00000105538|ENST00000222145|RASIP1	REV__ENSG00000105538|ENST00000222145|RASIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.17608642578125	2	406.175047	810.33554	2.6134	0.0010615	-1.5633	-0.00063496	1.0502	0.00042655	406.17470361655813	99.321	1.1441	99.683	99.176	100.32	0.36137					76	28	4	0	0	0	0.8651	1	12038	12038		25.574	1.3713	1	2117600	+		55973	17548	37399	37414	63262	63262					-0.07721411580689619
SSHIKSVHS	9	Unmodified	_SSHIKSVHS_					0	0	0		ENSG00000177485|ENST00000557385|ZBTB33	ENSG00000177485|ENST00000557385|ZBTB33	ENSG00000177485|ENST00000557385|ZBTB33	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.2580261230469	2	491.259248	980.503943	-1.8845	-0.00092578	2.008	0.00098645	0.12351	6.0676E-05	491.2600423814689	26.271	0.58956	26.271	25.916	26.506	0					30	25	2	0	0	0	0.76764	1	1003	1003		34.173	5.023	1	41078			55974	7144	37400	37415	63263	63263					0.012911151236153273
SSHLLRTRRK	10	Unmodified	_SSHLLRTRRK_					0	0	0		ENST00000577021.1_2_17:4781618-4784463:+|nuORF	ENST00000577021.1_2_17:4781618-4784463:+|nuORF	ENST00000577021.1_2_17:4781618-4784463:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.8851928710938	2	627.381094	1252.74764	-0.21918	-0.00013751	2.7815	0.0017451	2.5623	0.0016076	627.382569161749	117.84	0.45222	117.77	117.68	118.13	-0.07531					39	17	3	0	0	0	0.37624	1	12685	12685		14.137	5.4434	1	1073400			55975	14060	37401	37416	63264	63264					0.13137199288371448
SSHLLVLNRAV	11	Unmodified	_SSHLLVLNRAV_					0	0	0		ENST00000290231.10_1_20:44690715-44691024:-|nuORF	ENST00000290231.10_1_20:44690715-44691024:-|nuORF	ENST00000290231.10_1_20:44690715-44691024:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.8591918945312	2	604.859129	1207.70371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.472	1	82.598	82.098	83.098	0.12601								0	0	0	0.56276	1	7899	7899		28.081	12.44	1				55976	9671	37402	37417	63265	63265					0.10816170071370834
SSHLMEHQ	8	Unmodified	_SSHLMEHQ_					0	0	0		ENSG00000183309|ENST00000526926|ZNF623;nc|ENSG00000183309|O75123|ZNF623	ENSG00000183309|ENST00000526926|ZNF623	ENSG00000183309|ENST00000526926|ZNF623	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.71820068359375	2	484.716359	967.418164	1.6832	0.00081588	1.4648	0.00071003	3.148	0.0015259	484.7172727178253	99.415	0.71875	99.747	99.379	100.1	0.33295					61	17	4	0	0	0	0.87479	1	12010	12010		30.504	0	1	4527000			55977	7521	37403	37418	63266	63266					-0.06684793053545945
SSHTGVYIF	9	Unmodified	_SSHTGVYIF_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.6876220703125	2	505.750724	1009.4869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.36	1	34.398	33.898	34.898	0.038643								0	0	0	0.32159	1	1729	1729		23.042	2.5607	1				55978	7747	37404	37419	63267	63267					-0.017468054821847545
SSICWSSN	8	Unmodified	_SSICWSSN_					0	0	0		ENSG00000139350|ENST00000266742|NEDD1;nc|ENSG00000139350|Q8NHV4-3|NEDD1	ENSG00000139350|ENST00000266742|NEDD1	ENSG00000139350|ENST00000266742|NEDD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.1943359375	2	442.18436	882.354167	1.0314	0.00045607	3.2534	0.0014386	4.2848	0.0018947	442.1856275939143	97.401	1.0208	97.786	97.24	98.261	0.38548					32	24	2	0	0	0	0.4196	1	11762	11762		27.882	1.1893	1	155690			55979	4364	37405	37420	63268	63268					-0.09171573210505812
SSIGPVCHH	9	Unmodified	_SSIGPVCHH_					0	0	0			REV__ENST00000464251.5_1_X:148568821-148584844:-|nuORF	REV__ENST00000464251.5_1_X:148568821-148584844:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.7218322753906	2	468.721444	935.428335	0.4939	0.0002315	3.4726	0.0016277	3.9665	0.0018592	468.72287741489856	69.82	0.72598	69.949	69.77	70.496	0.1291					62	36	2	0	0	0	0.7932	1	6353	6353		26.796	0	1	1036600	+		55980	27089	37406	37421	63269	63269					-0.041961853283282835
SSIILYKKATK	11	Unmodified	_SSIILYKKATK_					0	0	0			REV__ENST00000397861.6_1_17:54910299-54910416:-|nuORF	REV__ENST00000397861.6_1_17:54910299-54910416:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.890869140625	2	626.387188	1250.75982	1.3747	0.00086107	-2.9986	-0.0018783	-1.624	-0.0010172	626.8868969487263	110.01	0.86485	110.13	109.81	110.68	0.12289					76	30	3	0	0	0	0.75164	1	11862	11862		21.686	0	1	3484200	+		55981	26181	37407	37422	63270	63270					0.14447378188174298
SSINLHKRIW	10	Unmodified	_SSINLHKRIW_					0	0	0			REV__ENSG00000204740|ENST00000454679|MALRD1	REV__ENSG00000204740|ENST00000454679|MALRD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.9156494140625	3	418.57529	1252.70404	-0.35452	-0.00014839	1.3151	0.00055046	0.96055	0.00040206	418.57544909700437	30.964	0.61636	31.044	30.811	31.428	0.079836					32	13	3	0	0	0	0.37624	1	2086	2086		21.686	0	1	248540	+		55982	23519	37408	37423	63271	63271					0.08779589791220133
SSITSIII	8	Unmodified	_SSITSIII_					0	0	0		ENST00000253233.5_1_12:123741599-123741686:+|nuORF	ENST00000253233.5_1_12:123741599-123741686:+|nuORF	ENST00000253233.5_1_12:123741599-123741686:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.25286865234375	2	417.252569	832.490584	-0.040205	-1.6776E-05	1.1748	0.00049019	1.1346	0.00047341	417.25296314698	35.536	1.154	35.476	35.254	36.408	-0.060333					58	32	2	0	0	0	0.86791	1	1875	1875		28.254	6.5519	1	236350			55983	9317	37409	37424	63272	63272					0.06763864291679056
SSKAENHMSR	10	Unmodified	_SSKAENHMSR_					0	0	0		ENST00000479391.6_3_9:98729892-98767017:+|nuORF;ENSG00000182150|ENST00000653738|ERCC6L2	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	ENST00000479391.6_3_9:98729892-98767017:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.770751953125	2	573.769654	1145.52475	-0.85757	-0.00049205	4.2107	0.0024159	3.3531	0.0019239	573.771928991387	37.93	0.96849	37.88	37.584	38.553	-0.050369					43	21	3	0	0	0	0.81117	1	2611	2611		38.754	2.3069	1	394790			55984	7425	37410	37425	63273	63273					-0.042186625590375115
SSKAQTSLT	9	Unmodified	_SSKAQTSLT_					0	0	0			REV__ENST00000244769.8_1_6:16586077-16586122:-|nuORF	REV__ENST00000244769.8_1_6:16586077-16586122:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.7462463378906	2	461.745639	921.476725	0.2189	0.00010108	1.4175	0.0006545	1.6364	0.00075558	461.74617064702255	20.12	0.73787	19.651	19.397	20.135	-0.46967					28	15	3	0	0	0	0.38563	2	602	602;613		58.782	5.4305	1	433790	+		55985	24247	37411	37426	63274;63275	63274					0.01284586792587561
SSKAQTSLT	9	Unmodified	_SSKAQTSLT_					0	0	0			REV__ENST00000244769.8_1_6:16586077-16586122:-|nuORF	REV__ENST00000244769.8_1_6:16586077-16586122:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	461.745639	921.476725	0.2189	0.00010108	1.4175	0.0006545	1.6364	0.00075558	461.74617064702255	20.12	0.73787	19.651	19.397	20.135	-0.46967	0.0017961	-0.00014974	NaN	58.782	28	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	433790	+		55986	24247	37411	37426							0.01284586792587561
SSKKKKKF	8	Unmodified	_SSKKKKKF_					0	0	0		ENST00000440030.1_1_6:28751412-28751496:-|nuORF;ENST00000467196.5_3_20:2638092-2638937:+|nuORF;ENST00000462630.5_1_20:2637388-2638937:+|nuORF;ENST00000492135.5_1_20:2636822-2638937:+|nuORF;ENSG00000101361|ENST00000329276|NOP56	ENST00000440030.1_1_6:28751412-28751496:-|nuORF	ENST00000440030.1_1_6:28751412-28751496:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.8158264160156	2	490.816202	979.617851	1.0178	0.00049954	-3.801	-0.0018656	-2.7832	-0.0013661	490.81431800120805	16.81	0.22403	16.887	16.778	17.002	0.07715					12	8	2	0	0	0	0.87922	1	142	142		31.955	2.8053	1	32259			55987	1938	37412	37427	63276	63276					0.127226299565109
SSKKKLKN	8	Unmodified	_SSKKKLKN_					0	0	0			REV__ENST00000370996.4_1_20:58513543-58513669:-|nuORF	REV__ENST00000370996.4_1_20:58513543-58513669:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.7975769042969	2	466.798009	931.581465	-0.33021	-0.00015414	-0.38243	-0.00017852	-0.71264	-0.00033266	466.7976705167877	19.101	1.2721	19.028	18.843	20.115	-0.073704					70	37	3	0	0	0	0.87064	1	380	380		29.15	1.2673	1	201130	+		55988	25677	37413	37428	63277	63277					0.11293753059783285
SSKKSALI	8	Unmodified	_SSKKSALI_					0	0	0		ENST00000495352.5_1_7:102124102-102135092:-|nuORF;ENST00000522223.1_7:102223281-102234330:-|nuORF;ENSG00000170667|ENST00000465829|RASA4B;ENSG00000105808|ENST00000262940|RASA4	ENST00000495352.5_1_7:102124102-102135092:-|nuORF	ENST00000495352.5_1_7:102124102-102135092:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.2582092285156	2	417.258185	832.501818	0.73077	0.00030492	0.058378	2.4359E-05	0.78915	0.00032928	417.25810331191536	21.663	2.6932	21.727	21.148	23.842	0.064745					160	99	2	0	0	0	0.80706	2	631	591;631		19.36	6.4008	1	105380			55989	2253	37414	37429	63278;63279	63279					0.07886686385802477
SSKLLATSK	9	Unmodified	_SSKLLATSK_					0	0	0		nc|ENSG00000184908|P51801-2|CLCNKB;ENSG00000184908|ENST00000375679|CLCNKB;nc|ENSG00000186510|P51800-2|CLCNKA;nc|ENSG00000186510|P51800-3|CLCNKA;ENSG00000186510|ENST00000331433|CLCNKA	nc|ENSG00000184908|P51801-2|CLCNKB	nc|ENSG00000184908|P51801-2|CLCNKB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7823181152344	2	467.782025	933.549496	-0.25741	-0.00012041	1.7042	0.00079721	1.4468	0.0006768	467.78264184327145	30.346	0.69899	30.279	29.984	30.683	-0.066113					39	15	4	0	0	0	0.7932	1	1993	1993		24.519	0.31644	1	679190			55990	7652	37415	37430	63280	63280					0.08006340585995986
SSKLLIFPFR	10	Unmodified	_SSKLLIFPFR_					0	0	0			REV__ENST00000323760.10_2_5:137667311-137667470:-|nuORF	REV__ENST00000323760.10_2_5:137667311-137667470:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3670043945312	2	604.363516	1206.71248	0.90474	0.00054679	3.9121	0.0023643	4.8168	0.0029111	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.86647	1	11425	11425		17.468	0	1	105740000	+		55991	25034	37416	37431	63281	63281					0.11739143707836774
SSKTGIESEYI	11	Unmodified	_SSKTGIESEYI_					0	0	0		chr2:68043048-68045988|26|18.42|0.43|5.43|-|2|None,C1D|2	chr2:68043048-68045988|26|18.42|0.43|5.43|-|2|None,C1D|2	chr2:68043048-68045988|26|18.42|0.43|5.43|-|2|None,C1D|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	607.3011474609375	2	607.300975	1212.5874	-0.45493	-0.00027628	2.1161	0.0012851	1.6612	0.0010088	607.3020290185127	58.773	0.91653	59.166	58.693	59.61	0.39209					43	21	3	0	0	0	0.71207	1	6182	6182		29.551	1.6685	1	572780			55992	344	37417	37432	63282	63282					-0.01039238009843757
SSKTLPHDI	9	Unmodified	_SSKTLPHDI_					0	0	0			REV__nc|ENSG00000137872|Q8NFY4-3|SEMA6D	REV__nc|ENSG00000137872|Q8NFY4-3|SEMA6D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.2697448730469	2	499.269281	996.52401	0.063777	3.1842E-05	-0.17125	-8.5499E-05	-0.10747	-5.3657E-05	499.2690985885145	20.416	0.67497	19.786	19.443	20.118	-0.6296					31	14	3	0	0	0	0.51307	1	648	648		51.335	5.3632	1	347620	+		55993	19420	37418	37433	63283	63283					0.025608660635725755
SSKYMQLVTIL	11	Unmodified	_SSKYMQLVTIL_					0	0	0			REV__ENST00000346872.7_2_17:37920768-37920894:-|nuORF	REV__ENST00000346872.7_2_17:37920768-37920894:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3616333007812	2	641.857406	1281.70026	1.7061	0.001095	1.7571	0.0011278	3.4631	0.0022228	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.45992	1	12718	12718		54.722	8.7501	1	27133000	+		55994	25322	37419	37434	63284	63284					0.07067739182525656
SSLGSVYS	8	Unmodified	_SSLGSVYS_					0	0	0		ENST00000418609.5_1_4:186508297-186508507:-|nuORF	ENST00000418609.5_1_4:186508297-186508507:-|nuORF	ENST00000418609.5_1_4:186508297-186508507:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1963195800781	2	400.195251	798.375948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.681	1	86.124	85.624	86.624	0.44331								0	0	0	0.30045	1	10012	10012		40.573	0	1				55995	11425	37420	37435	63285	63285					-0.03130445190288356
SSLHFVFV	8	Unmodified	_SSLHFVFV_					0	0	0		ENST00000473576.6_1_13:50234894-50235059:-|nuORF	ENST00000473576.6_1_13:50234894-50235059:-|nuORF	ENST00000473576.6_1_13:50234894-50235059:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.25506591796875	2	468.252903	934.491253	-0.11516	-5.3922E-05	4.166	0.0019507	4.0508	0.0018968	468.25473552954975	82.299	3.2758	82.365	81.1	84.376	0.06591					140	75	2	0	0	0	0.87922	1	8241	8241		31.955	0.37597	1	190410			55996	12285	37421	37436	63286	63286					0.021387037313843393
SSLIPPTVVL	10	Unmodified	_SSLIPPTVVL_					0	0	0			REV__nc|ENSG00000153827|Q14669-4|TRIP12	REV__nc|ENSG00000153827|Q14669-4|TRIP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.317138671875	2	513.3157	1024.61685	1.2841	0.00065913	0.62315	0.00031987	1.9072	0.000979	513.3160054348587	50.9	1.2329	51.652	51.04	52.273	0.75174					46	29	2	0	0	0	0.8608	1	5045	5045		34.173	0	1	370860	+		55997	20360	37422	37437	63287	63287					0.10552370796949617
SSLKEHTYPHR	11	Unmodified	_SSLKEHTYPHR_					0	0	0		nc|ENSG00000110844|Q6NWY9-4|PRPF40B	nc|ENSG00000110844|Q6NWY9-4|PRPF40B	nc|ENSG00000110844|Q6NWY9-4|PRPF40B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.6341857910156	3	452.233592	1353.67895	0.11987	5.4209E-05	2.8234	0.0012769	2.9433	0.0013311	452.23485253778125	31.649	0.4365	31.667	31.472	31.909	0.01836					14	9	3	0	0	0	0.17365	1	1715	1715		21.032	0	1	17391			55998	14841	37423	37438	63288	63288					0.016254901979664282
SSLLSRHKHL	10	Unmodified	_SSLLSRHKHL_					0	0	0		ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	ENSG00000182220|ENST00000636580|ATP6AP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.34326171875	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86272	1	9854	9854		24.519	0.99649	1	17904000			55999	7435	37424	37439	63289	63289					0.09147016757151505
SSLPAAALL	9	Unmodified	_SSLPAAALL_					0	0	0			REV__ENST00000345990.8_2_5:122847977-122881201:+|nuORF	REV__ENST00000345990.8_2_5:122847977-122881201:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7514953613281	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.77546	1	7573	7573		31.955	1.4512	1	579450	+		56000	25317	37425	37440	63290	63290					0.06383284011508294
SSLPVLLN	8	Unmodified	_SSLPVLLN_					0	0	0		chr4:103181456-103182762|61|30.23|0.45|6.08|-|1|CENPE,CENPE|1	chr4:103181456-103182762|61|30.23|0.45|6.08|-|1|CENPE,CENPE|1	chr4:103181456-103182762|61|30.23|0.45|6.08|-|1|CENPE,CENPE|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.75128173828125	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.89494	1	7541	7541		37.159	5.2042	1	579450			56001	413	37426	37441	63291	63291					0.06383284011519663
SSLQNPGP	8	Unmodified	_SSLQNPGP_					0	0	0		nc|ENSG00000102908|O94916-2|NFAT5;nc|ENSG00000102908|O94916|NFAT5;nc|ENSG00000102908|O94916-4|NFAT5;ENSG00000102908|ENST00000349945|NFAT5	nc|ENSG00000102908|O94916-2|NFAT5	nc|ENSG00000102908|O94916-2|NFAT5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2000427246094	2	400.200867	798.387182	1.235	0.00049424	-3.6984	-0.0014801	-2.4635	-0.00098588	400.2007500976596	65.261	1.216	65.647	64.776	65.992	0.38615					58	31	3	0	0	0	0.88944	1	7039	7039		57.811	9.8957	1	302440			56002	2032	37427	37442	63292	63292					-0.02007623096142197
SSLQNPGP	8	Unmodified	_SSLQNPGP_					0	0	0		nc|ENSG00000102908|O94916-2|NFAT5;nc|ENSG00000102908|O94916|NFAT5;nc|ENSG00000102908|O94916-4|NFAT5;ENSG00000102908|ENST00000349945|NFAT5	nc|ENSG00000102908|O94916-2|NFAT5	nc|ENSG00000102908|O94916-2|NFAT5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2011413574219	2	400.200867	798.387182	-0.072413	-2.898E-05	-3.5103	-0.0014048	-3.5827	-0.0014338	400.2011984622312	64.759	1.0181	65.313	64.852	65.87	0.55386					57	25	3	0	0	0	0.67263	2	7028	7028;7038		68.485	15.133	1	265310			56003	2032	37427	37442	63293;63294	63293					-0.02007623096142197
SSLRLLQQ	8	Unmodified	_SSLRLLQQ_					0	0	0		ENSG00000152443|ENST00000317178|ZNF776	ENSG00000152443|ENST00000317178|ZNF776	ENSG00000152443|ENST00000317178|ZNF776	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7799987792969	2	472.779816	943.545079	0.16923	8.0011E-05	-0.20064	-9.486E-05	-0.031408	-1.4849E-05	472.7796320364736	35.339	0.65096	35.284	35.071	35.722	-0.055149					39	21	3	0	0	0	0.91472	1	1834	1834		44.117	0	1	166940			56004	5175	37428	37443	63295	63295					0.07104876163089102
SSLRVKIASA	10	Unmodified	_SSLRVKIASA_					0	0	0			REV__ENST00000521636.1_1_8:39775423-39780236:+|nuORF	REV__ENST00000521636.1_1_8:39775423-39780236:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.313232421875	2	516.314023	1030.61349	-0.047037	-2.4286E-05	0.46194	0.00023851	0.4149	0.00021422	516.3142012916925	102.4	1.3625	102.42	101.73	103.09	0.01989					76	32	3	0	0	0	0.86272	1	11014	11014		24.519	1.4767	1	772400	+		56005	28122	37429	37444	63296	63296					0.09941120742928433
SSLRVKIASA	10	Unmodified	_SSLRVKIASA_					0	0	0			REV__ENST00000521636.1_1_8:39775423-39780236:+|nuORF	REV__ENST00000521636.1_1_8:39775423-39780236:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.31591796875	2	516.314023	1030.61349	3.1012	0.0016012	-3.1554	-0.0016292	-0.054235	-2.8002E-05	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.82886	2	13051	12892;13051		37.812	3.639	1	1162600	+		56006	28122	37429	37444	63297;63298	63298					0.09941120742928433
SSLRVKIASA	10	Unmodified	_SSLRVKIASA_					0	0	0			REV__ENST00000521636.1_1_8:39775423-39780236:+|nuORF	REV__ENST00000521636.1_1_8:39775423-39780236:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3145141601562	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86587	1	12706	12706		29.17	3.7199	1	4038100	+		56007	28122	37429	37444	63299	63299					0.09941120742928433
SSLTGYLL	8	Unmodified	_SSLTGYLL_					0	0	0			REV__ENSG00000137806|ENST00000260361|NDUFAF1	REV__ENSG00000137806|ENST00000260361|NDUFAF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.29486083984375	2	427.236919	852.459284	-1.7095	-0.00073037	1.6177	0.00069115	-0.091805	-3.9222E-05	427.2380175617824	76.464	0.17416	76.589	76.44	76.615	0.12485					7	5	2	0	0	0	0.4196	1	7146	7146		33.516	6.7195	1	27965	+		56008	19407	37430	37445	63300	63300					0.027152912575729715
SSLTLHVRSH	10	Unmodified	_SSLTLHVRSH_					0	0	0		nc|ENSG00000291239|Q3ZCX4-2|ZNF568;ENSG00000198453|ENST00000333987|ZNF568	nc|ENSG00000291239|Q3ZCX4-2|ZNF568	nc|ENSG00000291239|Q3ZCX4-2|ZNF568	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.8193969726562	2	568.812179	1135.60981	-0.33028	-0.00018787	-0.25825	-0.0001469	-0.58853	-0.00033477	569.3120668126	58.129	0.76871	58.113	57.811	58.58	-0.01643					80	32	4	0	0	0	0.86218	1	4937	4937		32.812	6.1195	1	146260			56009	8275	37431	37446	63301	63301					0.04742450969092715
SSLVQVRDH	9	Unmodified	_SSLVQVRDH_					0	0	0		nc|ENSG00000196968|Q495W5-2|FUT11	nc|ENSG00000196968|Q495W5-2|FUT11	nc|ENSG00000196968|Q495W5-2|FUT11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8187866210938	2	520.777805	1039.54106	-0.023056	-1.2007E-05	-0.40161	-0.00020915	-0.42467	-0.00022116	521.2770480208967	84.243	0.31468	84.691	84.557	84.871	0.44736					9	7	2	0	0	0	0.20789	1	9839	9839		76.774	23.837	1	62550			56010	15188	37432	37447	63302	63302					0.02286786669378671
SSLWTSSRP	9	Unmodified	_SSLWTSSRP_					0	0	0		ENST00000323039.9_2_19:40321124-40324722:-|nuORF;ENST00000593685.5_2_19:40321124-40324128:-|nuORF	ENST00000323039.9_2_19:40321124-40324722:-|nuORF	ENST00000323039.9_2_19:40321124-40324722:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.7626037597656	2	510.759081	1019.50361	0.43122	0.00022025	0.10176	5.1974E-05	0.53298	0.00027222	510.7591487687917	28.329	0.29079	28.365	28.288	28.579	0.036068					18	9	2	0	0	0	0.67345	1	1356	1356		42.396	1.618	1	24593			56011	10050	37433	37448	63303	63303					-0.005363045962440083
SSLYLGSL	8	Unmodified	_SSLYLGSL_					0	0	0		ENSG00000111700|ENST00000381545|SLCO1B3;nc|ENSG00000111700|Q9NPD5-2|SLCO1B3	ENSG00000111700|ENST00000381545|SLCO1B3	ENSG00000111700|ENST00000381545|SLCO1B3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.227294921875	2	420.229094	838.443634	-0.18765	-7.8855E-05	-2.6467	-0.0011122	-2.8344	-0.0011911	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.92973	1	7851	7851		50.025	7.5501	1	743780			56012	2605	37434	37449	63304	63304					0.017950047405179248
SSNAHRVI	8	Unmodified	_SSNAHRVI_					0	0	0			REV__nc|ENSG00000183814|Q5TKA1-3|LIN9	REV__nc|ENSG00000183814|Q5TKA1-3|LIN9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2406005859375	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.87922	1	7613	7613		31.955	7.7521	1	1068200	+		56013	22630	37435	37450	63305	63305					0.021228632976999506
SSNCGGFLFY	10	Unmodified	_SSNCGGFLFY_					0	0	0		nc|ENSG00000187908|Q9UGM3-9|DMBT1;nc|ENSG00000187908|Q9UGM3-4|DMBT1;nc|ENSG00000187908|Q9UGM3-8|DMBT1;nc|ENSG00000187908|Q9UGM3-2|DMBT1;nc|ENSG00000187908|Q9UGM3-5|DMBT1;nc|ENSG00000187908|Q9UGM3-3|DMBT1;nc|ENSG00000187908|Q9UGM3|DMBT1;nc|ENSG00000187908|Q9UGM3-7|DMBT1;ENSG00000187908|ENST00000338354|DMBT1	nc|ENSG00000187908|Q9UGM3-9|DMBT1	nc|ENSG00000187908|Q9UGM3-9|DMBT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.7344970703125	2	547.734217	1093.45388	0.42179	0.00023103	3.4014	0.0018631	3.8232	0.0020941	547.7356987472967	27.714	0.44574	27.676	27.434	27.88	-0.038523					17	10	2	0	0	0	0.86452	1	1351	1351		30.504	1.3541	1	31426			56014	7892	37436	37451	63306	63306					-0.0891075559654837
SSNGMVVN	8	Unmodified	_SSNGMVVN_					0	0	0		nc|ENSG00000165626|Q8N7W2-2|BEND7	nc|ENSG00000165626|Q8N7W2-2|BEND7	nc|ENSG00000165626|Q8N7W2-2|BEND7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.2325744628906	2	404.186903	806.359253	0.88317	0.00035696	2.4973	0.0010094	3.3804	0.0013663	404.1879029893561	84.888	0.15744	85.328	85.229	85.387	0.43967					5	3	2	0	0	0	0.4196	1	9902	9902		23.042	7.4007	1	44068			56015	15069	37437	37452	63307	63307					-0.051672693478849396
SSPETRLSY	9	Unmodified	_SSPETRLSY_					0	0	0		ENST00000287546.8_1_3:184585837-184586798:+|nuORF	ENST00000287546.8_1_3:184585837-184586798:+|nuORF	ENST00000287546.8_1_3:184585837-184586798:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.2582397460938	2	520.256371	1038.49819	0.22908	0.00011918	3.452	0.0017959	3.6811	0.0019151	520.2580100424938	94.771	0.8187	95.191	94.808	95.627	0.41964					47	19	3	0	0	0	0.18601	1	11348	11348		76.774	2.5191	1	798100			56016	9658	37438	37453	63308	63308					-0.019520281786981286
SSPFTQARAH	10	Unmodified	_SSPFTQARAH_					0	0	0		ENSG00000198722|ENST00000635942|UNC13B;nc|ENSG00000198722|O14795|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.2750244140625	2	551.275429	1100.53631	0.32503	0.00017918	-0.37436	-0.00020638	-0.04933	-2.7194E-05	551.2751109394707	27.083	1.2037	27.045	26.676	27.88	-0.038523					78	29	4	0	0	0	0.35939	1	1261	1261		67.494	0.53175	1	656180			56017	8315	37439	37454	63309	63309					-0.009940974733808616
SSPKKRPGG	9	Unmodified	_SSPKKRPGG_					0	0	0		ENST00000485091.5_1_16:772680-775160:-|nuORF;nc|ENSG00000162004|A2IDD5|CCDC78;ENSG00000162004|ENST00000345165|CCDC78	ENST00000485091.5_1_16:772680-775160:-|nuORF	ENST00000485091.5_1_16:772680-775160:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.263671875	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.7932	1	8375	8375		23.042	0	1	4511100			56018	5662	37440	37455	63310	63310					0.05435722848869773
SSPKKRPGG	9	Unmodified	_SSPKKRPGG_					0	0	0		ENST00000485091.5_1_16:772680-775160:-|nuORF;nc|ENSG00000162004|A2IDD5|CCDC78;ENSG00000162004|ENST00000345165|CCDC78	ENST00000485091.5_1_16:772680-775160:-|nuORF	ENST00000485091.5_1_16:772680-775160:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2637634277344	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.78536	1	9614	9614		29.15	1.2673	1	3505500			56019	5662	37440	37455	63311	63311					0.05435722848869773
SSPKSRTLI	9	Unmodified	_SSPKSRTLI_					0	0	0		ENST00000557565.1_1_14:35591805-35592316:+|nuORF;ENST00000603544.5_2_14:35591973-35592316:+|nuORF	ENST00000557565.1_1_14:35591805-35592316:+|nuORF	ENST00000557565.1_1_14:35591805-35592316:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7925720214844	2	494.792924	987.571294	-1.0341	-0.00051168	1.0424	0.00051576	0.008238	4.0761E-06	494.7933146843752	26.709	0.78882	26.681	26.36	27.149	-0.027704					34	18	3	0	0	0	0.76255	1	1166	1166		35.618	6.4687	1	107090			56020	13776	37441	37456	63312	63312					0.07701145334590365
SSPLASLAVSA	11	Unmodified	_SSPLASLAVSA_					0	0	0		ENST00000457356.8_1_8:72756359-72756527:+|nuORF	ENST00000457356.8_1_8:72756359-72756527:+|nuORF	ENST00000457356.8_1_8:72756359-72756527:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29071044921875	2	501.776939	1001.53933	-0.86795	-0.00043552	3.4191	0.0017156	2.5511	0.0012801	501.7788676807357	83.372	0.42406	83.803	83.659	84.083	0.43108					15	9	2	0	0	0	0.16261	1	9689	9689		49.536	17.581	1	129960			56021	11978	37442	37457	63313	63313					0.03861732860775646
SSPLKPDLYK	10	Unmodified	_SSPLKPDLYK_					0	0	0		ENST00000418595.1_1_6:112937907-112938114:-|nuORF	ENST00000418595.1_1_6:112937907-112938114:-|nuORF	ENST00000418595.1_1_6:112937907-112938114:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	574.3193359375	2	574.321514	1146.62847	-1.3729	-0.0007885	-2.1573	-0.001239	-3.5302	-0.0020275	574.3201384768535	94.096	3.9042	94.295	93.275	97.179	0.19827					253	92	4	0	0	0	0.82886	1	9660	9660		37.812	12.237	1	1586900			56022	11424	37443	37458	63314	63314					0.06102567820266813
SSPLVLQV	8	Unmodified	_SSPLVLQV_					0	0	0		ENSG00000183638|ENST00000382483|RP1L1	ENSG00000183638|ENST00000382483|RP1L1	ENSG00000183638|ENST00000382483|RP1L1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.75054931640625	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.428	1	77.481	76.981	77.981	0.052696								0	0	0	0.29344	1	7494	7494		31.955	0	1				56023	7547	37444	37459	63315	63315					0.06383284011519663
SSPPWMQDQV	10	Oxidation (M)	_SSPPWM(Oxidation (M))QDQV_		SSPPWM(1)QDQV		SSPPWM(48)QDQV	0	0	1			REV__ENST00000571332.5_1_17:2310517-2318631:-|nuORF	REV__ENST00000571332.5_1_17:2310517-2318631:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	595.7578735351562	2	595.760963	1189.50737	-1.0963	-0.00065314	-3.8682	-0.0023045	-4.9645	-0.0029576	595.7585728078863	42.601	0.69609	42.601	42.309	43.005	0					36	17	3	0	0	0	0.63899	1	2975	2975		47.96	6.5329	1	296840	+		56024	28932	37445	37460	63316	63316		426			-0.07980002884710302
SSPQGVRVSK	10	Unmodified	_SSPQGVRVSK_					0	0	0		ENST00000544304.5_1_12:120554610-120555222:-|nuORF	ENST00000544304.5_1_12:120554610-120555222:-|nuORF	ENST00000544304.5_1_12:120554610-120555222:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7935791015625	2	522.793455	1043.57236	1.2723	0.00066513	-1.5156	-0.00079234	-0.24333	-0.00012721	522.7925484697116	21.895	1.1217	21.452	20.87	21.992	-0.44324					57	25	4	0	0	0	0.83456	1	865	865		37.508	0.34906	1	389000			56025	13569	37446	37461	63317	63317					0.05231359703475391
SSPRKGSKKKP	11	Unmodified	_SSPRKGSKKKP_					0	0	0		ENSG00000103550|ENST00000219837|KNOP1;ENST00000565844.1_1_16:19721758-19726357:-|nuORF	ENSG00000103550|ENST00000219837|KNOP1	ENSG00000103550|ENST00000219837|KNOP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.57867431640625	3	400.578811	1198.7146	2.7176	0.0010886	1.583	0.00063413	4.3007	0.0017228	400.57928348734663	112.87	0.76526	112.84	112.7	113.46	-0.024811					36	18	3	0	0	0	0.75457	1	12525	12525		21.032	3.8976	1	3158500			56026	2093	37447	37462	63318	63318					0.12319572445653648
SSPVFSMA	8	Unmodified	_SSPVFSMA_					0	0	0		ENST00000529428.5_1_16:30316405-30316441:-|nuORF	ENST00000529428.5_1_16:30316405-30316441:-|nuORF	ENST00000529428.5_1_16:30316405-30316441:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.1942443847656	2	413.194196	824.37384	0.11885	4.911E-05	-1.3153	-0.00054348	-1.1965	-0.00049437	413.19356375040996	78.966	3.3342	78.912	78.52	81.854	-0.053558					185	96	2	0	0	0	0.87922	1	7882	7882		31.955	0	1	948300			56027	13324	37448	37463	63319	63319					-0.04537197199726961
SSPVFSMA	8	Unmodified	_SSPVFSMA_					0	0	0		ENST00000529428.5_1_16:30316405-30316441:-|nuORF	ENST00000529428.5_1_16:30316405-30316441:-|nuORF	ENST00000529428.5_1_16:30316405-30316441:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1942138671875	2	413.194196	824.37384	-1.8303	-0.00075625	0.64277	0.00026559	-1.1875	-0.00049066	413.19437338858427	78.719	2.8895	78.846	78.411	81.3	0.12695					158	87	2	0	0	0	0.884	1	7458	7458		33.516	1.5607	1	956620			56028	13324	37448	37463	63320	63320					-0.04537197199726961
SSQRVVKLG	9	Unmodified	_SSQRVVKLG_					0	0	0		ENST00000379834.6_1_6:7389749-7389923:+|nuORF	ENST00000379834.6_1_6:7389749-7389923:+|nuORF	ENST00000379834.6_1_6:7389749-7389923:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.2926330566406	2	487.293091	972.571629	-1.2737	-0.00062065	1.3409	0.00065343	0.06726	3.2776E-05	487.2936158611297	90.804	1.4266	91.275	90.816	92.243	0.47068					98	34	4	0	0	0	0.76764	1	10823	10823		34.173	1.3601	1	1668500			56029	10903	37449	37464	63321	63321					0.08424565054428967
SSQYSLTG	8	Unmodified	_SSQYSLTG_					0	0	0		ENSG00000171357|ENST00000371980|LURAP1	ENSG00000171357|ENST00000371980|LURAP1	ENSG00000171357|ENST00000371980|LURAP1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.6983642578125	2	421.698158	841.381762	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.297	1	58.331	57.831	58.831	0.033905								0	0	0	0.29245	1	5342	5342		30.504	1.3541	1				56030	6660	37450	37465	63322	63322					-0.045273466786056815
SSRAARWVLQ	10	Unmodified	_SSRAARWVLQ_					0	0	0			REV__nc|ENSG00000184381|O60733-2|PLA2G6	REV__nc|ENSG00000184381|O60733-2|PLA2G6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.334716796875	2	587.327996	1172.64144	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.43	1	116.42	115.92	116.92	-0.014999								0	0	0	0.45132	1	13970	13970		23.523	2.6855	1		+		56031	22671	37451	37466	63323	63323					0.06202443723032047
SSRKKTRTR	9	Unmodified	_SSRKKTRTR_					0	0	0		ENSG00000153157|ENST00000283141|SYCP2L	ENSG00000153157|ENST00000283141|SYCP2L	ENSG00000153157|ENST00000283141|SYCP2L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3402099609375	2	560.338895	1118.66324	1.387	0.00077719	0.83647	0.00046871	2.2235	0.0012459	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.78528	1	11336	11336		29.17	2.374	1	81463000			56032	5218	37452	37467	63324	63324					0.10865248471600353
SSRLCHKL	8	Unmodified	_SSRLCHKL_					0	0	0		ENST00000493216.1_1_22:20939554-20940988:+|nuORF	ENST00000493216.1_1_22:20939554-20940988:+|nuORF	ENST00000493216.1_1_22:20939554-20940988:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2877197265625	2	472.260736	942.50692	1.9938	0.00094161	-4.1354	-0.001953	-2.1416	-0.0010114	472.258696146967	95.304	0.45894	95.246	94.807	95.266	-0.057526					19	10	3	0	0	0	0.4196	1	10133	10133		53.351	16.192	1	365940			56033	12720	37453	37468	63325	63325					0.033366669767588064
SSRLGRNKGF	10	Unmodified	_SSRLGRNKGF_					0	0	0		ENST00000470209.5_1_X:153173185-153178999:-|nuORF;ENST00000404127.6_1_X:153173185-153186849:-|nuORF;ENSG00000089820|ENST00000350060|ARHGAP4;nc|ENSG00000089820|P98171-2|ARHGAP4	ENST00000470209.5_1_X:153173185-153178999:-|nuORF	ENST00000470209.5_1_X:153173185-153178999:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.3126220703125	2	561.312346	1120.61014	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.105	1	70.241	69.741	70.741	0.13506								0	0	0	0.45132	1	6349	6349		26.693	2.4902	1				56034	1633	37454	37469	63326	63326					0.05465870688931318
SSRLIKVHLDK	11	Unmodified	_SSRLIKVHLDK_					0	0	0		ENST00000484240.1_1_17:44798950-44799232:-|nuORF	ENST00000484240.1_1_17:44798950-44799232:-|nuORF	ENST00000484240.1_1_17:44798950-44799232:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3928833007812	2	648.393336	1294.77212	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.9	1	112.87	112.37	113.37	-0.032333								0	0	0	0.56276	1	12047	12047		12.812	1.9462	1				56035	12531	37455	37470	63327	63327					0.13652414651210165
SSRLQYSVIK	10	Unmodified	_SSRLQYSVIK_					0	0	0			REV__ENST00000450732.1_3_3:38542952-38560776:+|nuORF	REV__ENST00000450732.1_3_3:38542952-38560776:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8091430664062	2	590.837862	1179.66117	-2.5754	-0.0015216	-0.47774	-0.00028226	-3.0531	-0.0018039	590.8389569096145	59.755	0.10787	59.788	59.691	59.799	0.032822					4	2	2	0	0	0	0.37624	1	5534	5534		95.815	21.56	1	23212	+		56036	26873	37456	37471	63328	63328					0.07852774943125951
SSRLVWPI	8	Unmodified	_SSRLVWPI_					0	0	0			REV__ENST00000467824.1_1_22:33260900-33265017:-|nuORF	REV__ENST00000467824.1_1_22:33260900-33265017:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.277587890625	2	479.279452	956.544351	-1.1288	-0.000541	-3.1146	-0.0014928	-4.2434	-0.0020338	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.87422	1	7647	7647		30.318	2.4355	1	1311100	+		56037	25445	37457	37472	63329	63329					0.0643408151404401
SSRLVWPI	8	Unmodified	_SSRLVWPI_					0	0	0			REV__ENST00000467824.1_1_22:33260900-33265017:-|nuORF	REV__ENST00000467824.1_1_22:33260900-33265017:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27752685546875	2	479.279452	956.544351	-1.0919	-0.00052333	-3.0273	-0.0014509	-4.1192	-0.0019742	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.91472	1	8032	8032		44.117	5.3107	1	4644500	+		56038	25445	37457	37472	63330	63330					0.0643408151404401
SSRLVWPI	8	Unmodified	_SSRLVWPI_					0	0	0			REV__ENST00000467824.1_1_22:33260900-33265017:-|nuORF	REV__ENST00000467824.1_1_22:33260900-33265017:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773132324219	2	479.279452	956.544351	-0.93682	-0.000449	-3.4908	-0.001673	-4.4276	-0.002122	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.87479	4	8262	8202;8262;8299;8339		40.778	5.3006	1	2046100	+		56039	25445	37457	37472	63331;63332;63333;63334	63332					0.0643408151404401
SSRLVWPI	8	Unmodified	_SSRLVWPI_					0	0	0			REV__ENST00000467824.1_1_22:33260900-33265017:-|nuORF	REV__ENST00000467824.1_1_22:33260900-33265017:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774658203125	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.89043	1	8224	8224		35.618	3.6634	1	7438100	+		56040	25445	37457	37472	63335	63335					0.0643408151404401
SSRQLLGPN	9	Unmodified	_SSRQLLGPN_					0	0	0		ENSG00000090924|ENST00000425673|PLEKHG2;nc|ENSG00000090924|Q9H7P9-3|PLEKHG2	ENSG00000090924|ENST00000425673|PLEKHG2	ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2664489746094	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.71772	1	8452	8452		39.253	2.0937	1	1182200			56041	1660	37458	37473	63336	63336					0.03315401640657001
SSRQLLGPN	9	Unmodified	_SSRQLLGPN_					0	0	0		ENSG00000090924|ENST00000425673|PLEKHG2;nc|ENSG00000090924|Q9H7P9-3|PLEKHG2	ENSG00000090924|ENST00000425673|PLEKHG2	ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.2669372558594	2	486.267073	970.519593	1.0382	0.00050483	-0.85752	-0.00041699	0.18065	8.7843E-05	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.55097	1	9042	9042		49.442	5.3247	1	1819100			56042	1660	37458	37473	63337	63337					0.03315401640657001
SSRQLLGPN	9	Unmodified	_SSRQLLGPN_					0	0	0		ENSG00000090924|ENST00000425673|PLEKHG2;nc|ENSG00000090924|Q9H7P9-3|PLEKHG2	ENSG00000090924|ENST00000425673|PLEKHG2	ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.26708984375	2	486.267073	970.519593	-1.0938	-0.00053186	1.2715	0.00061828	0.17773	8.6424E-05	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.73802	1	8749	8749		37.812	1.3648	1	1852700			56043	1660	37458	37473	63338	63338					0.03315401640657001
SSRRGVGFG	9	Unmodified	_SSRRGVGFG_					0	0	0			REV__chr13:44576246-44576435|42|10.86|0.64|4.09|-|1|TSC22D1,None|2	REV__chr13:44576246-44576435|42|10.86|0.64|4.09|-|1|TSC22D1,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.74639892578125	2	461.746308	921.478063	-0.10939	-5.0511E-05	0.27939	0.00012901	0.17	7.8498E-05	461.7463053326962	20.277	0.58719	19.647	19.397	19.984	-0.62961					29	12	3	0	0	0	0.51307	1	645	645		51.335	8.861	1	447280	+		56044	15577	37459	37474	63339	63339					0.01418265672009511
SSRRPLAN	8	Unmodified	_SSRRPLAN_					0	0	0			REV__ENST00000533415.5_1_17:45198303-45266605:-|nuORF	REV__ENST00000533415.5_1_17:45198303-45266605:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.756103515625	2	450.754133	899.493713	0.78548	0.00035406	-0.70514	-0.00031784	0.080345	3.6216E-05	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.87922	1	8151	8151		31.955	1.4512	1	420760	+		56045	16068	37460	37475	63340	63340					0.03994552189033129
SSSAKKKA	8	Unmodified	_SSSAKKKA_					0	0	0			REV__ENSG00000166197|ENST00000605788|NOLC1	REV__ENSG00000166197|ENST00000605788|NOLC1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2096252441406	2	403.74016	805.465767	-1.21	-0.00048854	0.0071432	2.884E-06	-1.2029	-0.00048565	403.7401446309096	85.991	0.64351	85.991	85.742	86.386	0					23	14	2	0	0	0	0.4196	1	8152	8152		16.473	5.6076	1	52479	+		56046	21266	37461	37476	63341	63341					0.055252292089562616
SSSATMSH	8	Unmodified	_SSSATMSH_					0	0	0			REV__ENSG00000112511|ENST00000374516|PHF1	REV__ENSG00000112511|ENST00000374516|PHF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.17041015625	2	404.16871	806.322867	0.028783	1.1633E-05	2.5917	0.0010475	2.6205	0.0010591	404.17015585403414	78.633	4.5965	78.579	78.135	82.731	-0.053558					226	127	5	0	0	0	0.84341	1	7944	7944		24.203	4.206	1	6964800	+		56047	17949	37462	37477	63342	63342					-0.08804146244585809
SSSCPLVL	8	Unmodified	_SSSCPLVL_					0	0	0		ENST00000487903.5_1_13:113537159-113537519:+|nuORF	ENST00000487903.5_1_13:113537159-113537519:+|nuORF	ENST00000487903.5_1_13:113537159-113537519:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2091064453125	2	403.209847	804.40514	-0.18721	-7.5483E-05	-1.9947	-0.00080429	-2.1819	-0.00087978	403.20895430476565	85.948	2.3712	86.015	85.029	87.4	0.067268					117	54	4	0	0	0	0.84341	1	8621	8621		24.203	3.7209	1	1482400			56048	12612	37463	37478	63343	63343					-0.004886241656436141
SSSFDEDSSD	10	Unmodified	_SSSFDEDSSD_					0	0	0		nc|ENSG00000196588|Q969V6|MRTFA;ENSG00000196588|ENST00000355630|MRTFA	nc|ENSG00000196588|Q969V6|MRTFA	nc|ENSG00000196588|Q969V6|MRTFA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.326904296875	2	538.188548	1074.36254	0.84058	0.00045239	1.874	0.0010086	2.7146	0.001461	538.1902126366366	100.82	0.68107	100.96	100.73	101.41	0.14352					31	16	4	0	0	0	0.37624	1	10536	10536		20.947	0	1	104720			56049	8078	37464	37479	63344	63344					-0.17166392550848286
SSSLKKGD	8	Unmodified	_SSSLKKGD_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	411.2171630859375	2	411.2218	820.429047	3.0004	0.0012338	-1.1863	-0.00048784	1.8141	0.00074599	411.2209736113263	87.027	0.99088	87.082	86.567	87.558	0.055641					38	22	3	0	0	0	0.88185	1	8870	8870		32.812	4.9302	1	257350	+		56050	20385;29943	37465	37480	63345	63345					0.011649325923826837
SSSPLLAM	8	Unmodified	_SSSPLLAM_					0	0	0		ENST00000377291.2_1_5:175110069-175110369:+|nuORF	ENST00000377291.2_1_5:175110069-175110369:+|nuORF	ENST00000377291.2_1_5:175110069-175110369:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.208984375	2	403.209847	804.40514	-1.2088	-0.00048741	-0.91536	-0.00036908	-2.1242	-0.00085649	403.20939277352	86.047	3.2334	86.047	85.315	88.548	0					134	74	4	0	0	0	0.87479	1	8174	8174		30.504	0	1	1412000			56051	10833	37466	37481	63346	63346					-0.004886241656436141
SSSRVLLAGA	10	Unmodified	_SSSRVLLAGA_					0	0	0		ENSG00000129038|ENST00000261921|LOXL1	ENSG00000129038|ENST00000261921|LOXL1	ENSG00000129038|ENST00000261921|LOXL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	480.7763366699219	2	480.777274	959.539994	-0.25801	-0.00012405	-0.40892	-0.0001966	-0.66693	-0.00032065	480.77712785263947	26.461	0.44105	26.422	26.187	26.628	-0.038525					14	8	2	0	0	0	0.86718	1	1191	1191		27.882	6.9353	1	35284			56052	3571	37467	37482	63347	63347					0.05860572300480271
SSSYLIRTA	9	Unmodified	_SSSYLIRTA_					0	0	0		ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.27069091796875	2	499.269281	996.52401	0.15001	7.4893E-05	-0.064481	-3.2193E-05	0.085525	4.27E-05	499.2690919376944	20.295	0.55097	19.836	19.549	20.1	-0.4591					34	11	4	0	0	0	0.33718	1	637	637		62.107	21.329	1	254710			56053	6723	37468	37483	63348	63348					0.025608660635839442
SSSYRRKG	8	Unmodified	_SSSYRRKG_					0	0	0			REV__ENST00000554655.5_1_14:24837525-24841293:+|nuORF	REV__ENST00000554655.5_1_14:24837525-24841293:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.768798828125	2	470.75159	939.488627	-0.24282	-0.00011431	1.2189	0.0005738	0.97609	0.0004595	470.7521604027674	52.661	0.32977	53.084	52.889	53.219	0.42348					9	7	2	0	0	0	0.4196	1	5260	5260		44.117	0	1	87101	+		56054	17231	37469	37484	63349	63349					0.016462483264376715
SSTLLSIL	8	Unmodified	_SSTLLSIL_					0	0	0		ENSG00000155495|ENST00000285879|MAGEC1	ENSG00000155495|ENST00000285879|MAGEC1	ENSG00000155495|ENST00000285879|MAGEC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2525634765625	2	417.252569	832.490584	-0.20849	-8.6991E-05	0.47489	0.00019815	0.2664	0.00011116	417.2527156855551	40.298	1.271	40.25	40.046	41.317	-0.04789					89	47	3	0	0	0	0.86288	1	2536	2536		26.796	0	1	609210			56055	5324	37470	37485	63350	63350					0.06763864291679056
SSTRIKIIGT	10	Unmodified	_SSTRIKIIGT_					0	0	0			REV__ENST00000597958.5_1_10:75256229-75279415:+|nuORF	REV__ENST00000597958.5_1_10:75256229-75279415:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.32666015625	2	538.327131	1074.63971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.06	1	103.19	102.69	103.69	0.12622								0	0	0	0.45132	1	10880	10880		29.17	3.7199	1		+		56056	29275	37471	37486	63351	63351					0.10537389914429696
SSTRWFLMSRR	11	Unmodified	_SSTRWFLMSRR_					0	0	0		ENST00000255684.9_1_11:63273877-63276100:+|nuORF	ENST00000255684.9_1_11:63273877-63276100:+|nuORF	ENST00000255684.9_1_11:63273877-63276100:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.2504577636719	3	476.250589	1425.72994	-0.70111	-0.0003339	-1.2161	-0.00057918	-1.9172	-0.00091308	476.24955485860966	29.481	0.565	29.462	29.139	29.704	-0.019407					30	20	2	0	0	0	0.75121	1	1492	1492		21.78	4.6137	1	32811			56057	9331	37472	37487	63352	63352					0.03410115971155392
SSVKVRSLIS	10	Unmodified	_SSVKVRSLIS_					0	0	0		nc|ENSG00000118263|O75840-3|KLF7	nc|ENSG00000118263|O75840-3|KLF7	nc|ENSG00000118263|O75840-3|KLF7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.327392578125	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.85834	1	12903	12903		22.58	4.2552	1	4041000			56058	14866	37473	37488	63353	63353					0.10537389914429696
SSVPVPFAEI	10	Unmodified	_SSVPVPFAEI_					0	0	0			REV__ENST00000264025.7_1_11:119533142-119533592:-|nuORF	REV__ENST00000264025.7_1_11:119533142-119533592:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3035278320312	2	523.281857	1044.54916	1.0197	0.0005336	1.6429	0.00085972	2.6627	0.0013933	523.7828024218912	87.925	0.85864	88.374	87.934	88.793	0.44893					46	20	3	0	0	0	0.37624	1	10285	10285		47.657	29.333	1	166700	+		56059	24459	37474	37489	63354	63354					0.02866920866131295
SSVRATLPAAS	11	Unmodified	_SSVRATLPAAS_					0	0	0			REV__ENST00000517958.1_1_5:153783663-153789251:+|nuORF	REV__ENST00000517958.1_1_5:153783663-153789251:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2918090820312	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.70737	1	9052	9052		30.318	2.2362	1	1390700	+		56060	28058	37475	37490	63355	63355					0.04507939983614051
SSVRRRKIPT	10	Unmodified	_SSVRRRKIPT_					0	0	0			REV__nc|ENSG00000115464|Q70CQ2-3|USP34	REV__nc|ENSG00000115464|Q70CQ2-3|USP34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	401.24627685546875	3	400.582556	1198.72584	-1.7912	-0.00071753	-3.1329	-0.001255	-4.9241	-0.0019725	400.5810902225448	111.65	0.42501	111.76	111.55	111.97	0.11118					38	12	4	0	0	0	0.85633	1	12013	12013		21.686	0.8486	1	12328000	+		56061	18123	37476	37491	63356	63356					0.13442394539788438
SSVVKKSV	8	Unmodified	_SSVVKKSV_					0	0	0			REV__ENST00000454079.5_1_3:50099151-50099352:+|nuORF	REV__ENST00000454079.5_1_3:50099151-50099352:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2576904296875	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.84696	1	1014	1014		10.866	1.1599	1	1763000	+		56062	26920	37477	37492	63357	63357					0.07886686385813846
SSVVRRLG	8	Unmodified	_SSVVRRLG_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2659912109375	2	437.266876	872.519199	-0.36504	-0.00015962	-2.3712	-0.0010368	-2.7362	-0.0011965	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.84341	1	1086	1086		24.203	1.1603	1	1300600			56063	6613	37478	37493	63358	63358					0.07784026711476599
SSVYAGNN	8	Unmodified	_SSVYAGNN_					0	0	0		nc|ENSG00000067141|Q92859-4|NEO1;ENSG00000067141|ENST00000261908|NEO1;nc|ENSG00000067141|Q92859-3|NEO1;nc|ENSG00000067141|Q92859-2|NEO1	nc|ENSG00000067141|Q92859-4|NEO1	nc|ENSG00000067141|Q92859-4|NEO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.18304443359375	2	406.182675	810.350796	-1.9281	-0.00078318	2.4549	0.00099714	0.52677	0.00021396	406.18338769869695	26.098	1.0435	26.165	25.679	26.723	0.066877					68	51	2	0	0	0	0.85277	1	997	997		25.45	0.94616	1	70169			56064	1176	37479	37494	63359	63359					-0.06196499992847748
SSYSGSHS	8	Unmodified	_SSYSGSHS_					0	0	0			REV__nc|ENSG00000148516|P37275-3|ZEB1;REV__nc|ENSG00000169554|O60315-2|ZEB2	REV__nc|ENSG00000148516|P37275-3|ZEB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.16748046875	2	406.164482	810.314411	4.6428	0.0018857	1.0754	0.0004368	5.7182	0.0023225	406.165127679233	107.78	0.25644	107.9	107.7	107.96	0.11715					14	9	3	0	0	0	0.4196	1	13178	13178		17.365	0	1	6453800	+		56065	20122;21585	37480	37495	63360	63360					-0.09833376889559986
SSYSTVTSH	9	Unmodified	_SSYSTVTSH_					0	0	0			REV__nc|ENSG00000178821|Q8NDY8-2|TMEM52	REV__nc|ENSG00000178821|Q8NDY8-2|TMEM52	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7179870605469	2	484.719621	967.42469	1.6171	0.00078385	-4.4441	-0.0021542	-2.827	-0.0013703	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.76255	1	11557	11557		35.618	3.6634	1	7541600	+		56066	22297	37481	37496	63361	63361					-0.060325766211803966
STANPCSQ	8	Unmodified	_STANPCSQ_					0	0	0			REV__nc|ENSG00000179709|Q86W28-2|NLRP8	REV__nc|ENSG00000179709|Q86W28-2|NLRP8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.2091064453125	2	404.16871	806.322867	0.97785	0.00039521	0.82939	0.00033521	1.8072	0.00073043	404.1691979012998	85.286	0.68031	85.725	85.348	86.028	0.43967					30	16	3	0	0	0	0.4196	1	9982	9982		10.265	3.5297	1	246960	+		56067	22351	37482	37497	63362	63362					-0.08804146244585809
STASELSPK	9	Unmodified	_STASELSPK_					0	0	0		nc|ENSG00000116871|Q3KQU3-2|MAP7D1;nc|ENSG00000116871|Q3KQU3-4|MAP7D1;ENSG00000116871|ENST00000474796|MAP7D1;nc|ENSG00000116871|Q3KQU3|MAP7D1	nc|ENSG00000116871|Q3KQU3-2|MAP7D1	nc|ENSG00000116871|Q3KQU3-2|MAP7D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.239501953125	2	460.24019	918.465826	-0.87904	-0.00040457	1.3085	0.00060221	0.42942	0.00019764	460.2406355194744	27.262	0.92603	27.087	26.658	27.584	-0.17559					41	20	3	0	0	0	0.24527	1	1553	1553		69.628	8.6557	1	288190			56068	2952	37483	37498	63363	63363					0.0033318441829806034
STASELSPK	9	Unmodified	_STASELSPK_					0	0	0		nc|ENSG00000116871|Q3KQU3-2|MAP7D1;nc|ENSG00000116871|Q3KQU3-4|MAP7D1;ENSG00000116871|ENST00000474796|MAP7D1;nc|ENSG00000116871|Q3KQU3|MAP7D1	nc|ENSG00000116871|Q3KQU3-2|MAP7D1	nc|ENSG00000116871|Q3KQU3-2|MAP7D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	460.2398986816406	2	460.24019	918.465826	1.4378	0.00066173	-1.1854	-0.00054556	0.25242	0.00011617	460.23943832172796	27.262	0.81963	27.007	26.634	27.454	-0.25465					38	18	3	0	0	0	0.051853	2	1580	1567;1580		107.01	29.69	1	242940			56069	2952	37483	37498	63364;63365	63365					0.0033318441829806034
STCKPPHMY	9	Unmodified	_STCKPPHMY_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.2378540039062	2	532.238612	1062.46267	-0.7	-0.00037257	-0.56477	-0.00030059	-1.2648	-0.00067316	532.2381204164618	39.876	0.77567	39.833	39.45	40.226	-0.043694					41	17	3	0	0	0	0.62081	1	2896	2896		45.952	1.5748	1	279060	+		56070	18022	37484	37499	63366	63366					-0.06606105231730908
STDKAEYTFY	10	Unmodified	_STDKAEYTFY_					0	0	0		ENST00000514380.5_1_4:26322378-26431729:+|nuORF;nc|ENSG00000168214|Q06330-3|RBPJ;nc|ENSG00000168214|Q06330-2|RBPJ;nc|ENSG00000168214|Q06330-5|RBPJ;nc|ENSG00000168214|Q06330-4|RBPJ;nc|ENSG00000168214|Q06330-6|RBPJ;ENSG00000168214|ENST00000355476|RBPJ;nc|ENSG00000168214|Q06330|RBPJ	ENST00000514380.5_1_4:26322378-26431729:+|nuORF	ENST00000514380.5_1_4:26322378-26431729:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.7750244140625	2	612.774593	1223.53463	-0.29935	-0.00018344	-0.097047	-5.9468E-05	-0.3964	-0.0002429	612.7745846223667	51.863	0.98487	51.861	51.526	52.511	-0.0020447					49	22	3	0	0	0	0.86106	1	4457	4457		33.922	2.3918	1	349660			56071	6382	37485	37500	63367	63367					-0.06819196072660816
STDKAEYTFY	10	Unmodified	_STDKAEYTFY_					0	0	0		ENST00000514380.5_1_4:26322378-26431729:+|nuORF;nc|ENSG00000168214|Q06330-3|RBPJ;nc|ENSG00000168214|Q06330-2|RBPJ;nc|ENSG00000168214|Q06330-5|RBPJ;nc|ENSG00000168214|Q06330-4|RBPJ;nc|ENSG00000168214|Q06330-6|RBPJ;ENSG00000168214|ENST00000355476|RBPJ;nc|ENSG00000168214|Q06330|RBPJ	ENST00000514380.5_1_4:26322378-26431729:+|nuORF	ENST00000514380.5_1_4:26322378-26431729:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.7748413085938	2	612.774593	1223.53463	-0.37044	-0.00022699	0.24109	0.00014773	-0.12934	-7.9259E-05	612.7746846392763	51.847	0.79761	51.824	51.486	52.283	-0.02343					47	18	4	0	0	0	0.35939	3	4546	4535;4546;4568		67.494	10.85	1	390990			56072	6382	37485	37500	63368;63369;63370	63369					-0.06819196072660816
STDKAEYTFY	10	Unmodified	_STDKAEYTFY_					0	0	0		ENST00000514380.5_1_4:26322378-26431729:+|nuORF;nc|ENSG00000168214|Q06330-3|RBPJ;nc|ENSG00000168214|Q06330-2|RBPJ;nc|ENSG00000168214|Q06330-5|RBPJ;nc|ENSG00000168214|Q06330-4|RBPJ;nc|ENSG00000168214|Q06330-6|RBPJ;ENSG00000168214|ENST00000355476|RBPJ;nc|ENSG00000168214|Q06330|RBPJ	ENST00000514380.5_1_4:26322378-26431729:+|nuORF	ENST00000514380.5_1_4:26322378-26431729:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.774658203125	2	612.774593	1223.53463	-0.66835	-0.00040955	0.758	0.00046448	0.089648	5.4934E-05	612.7749315093743	51.905	0.71196	51.917	51.639	52.351	0.012436					43	16	4	0	0	0	0.27582	3	4490	4490;4499;4510		75.043	14.071	1	386270			56073	6382	37485	37500	63371;63372;63373	63371					-0.06819196072660816
STDLKMRG	8	Unmodified	_STDLKMRG_					0	0	0		ENSG00000132164|ENST00000254488|SLC6A11	ENSG00000132164|ENST00000254488|SLC6A11	ENSG00000132164|ENST00000254488|SLC6A11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.9028015136719	2	454.236927	906.459301	0.6644	0.0003018	-3.0889	-0.0014031	-2.4245	-0.0011013	454.2355373409415	28.004	1.2128	27.981	27.272	28.484	-0.023556					42	28	3	0	0	0	0.4196	1	1263	1263		37.159	3.6435	1	35471			56074	3768	37486	37501	63374	63374					0.002329679859258249
STDPEALHY	9	Unmodified	_STDPEALHY_					0	0	0		ENST00000513842.1_1_4:7765494-7800689:-|nuORF;nc|ENSG00000196526|Q8N556|AFAP1;ENSG00000196526|ENST00000420658|AFAP1;ENST00000508415.1_1_4:7790587-7795535:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7345581054688	2	516.735271	1031.45599	0.31674	0.00016367	-2.2836	-0.00118	-1.9669	-0.0010164	516.7340497824208	43.621	0.57462	43.594	43.273	43.848	-0.026764					24	13	2	0	0	0	0.47272	2	3322	3322;3332		53.351	12.779	1	190390			56075	8068	37487	37502	63375;63376	63375					-0.058480035870843494
STDPEALHY	9	Unmodified	_STDPEALHY_					0	0	0		ENST00000513842.1_1_4:7765494-7800689:-|nuORF;nc|ENSG00000196526|Q8N556|AFAP1;ENSG00000196526|ENST00000420658|AFAP1;ENST00000508415.1_1_4:7790587-7795535:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7341918945312	2	516.735271	1031.45599	-0.72826	-0.00037632	-1.2248	-0.00063291	-1.9531	-0.0010092	516.7345563584511	43.524	0.55219	43.488	43.276	43.828	-0.035816					26	12	3	0	0	0	0.28875	1	3421	3421		65.803	11.027	1	194890			56076	8068	37487	37502	63377	63377					-0.058480035870843494
STDPEALHY	9	Unmodified	_STDPEALHY_					0	0	0		ENST00000513842.1_1_4:7765494-7800689:-|nuORF;nc|ENSG00000196526|Q8N556|AFAP1;ENSG00000196526|ENST00000420658|AFAP1;ENST00000508415.1_1_4:7790587-7795535:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.734375	2	516.735271	1031.45599	-0.60741	-0.00031387	-1.2232	-0.00063206	-1.8306	-0.00094593	516.7345818626145	43.548	0.68573	43.546	43.282	43.968	-0.002449					27	16	2	0	0	0	0.19953	1	3353	3353		73.975	8.5094	1	179990			56077	8068	37487	37502	63378	63378					-0.058480035870843494
STDPEALHY	9	Unmodified	_STDPEALHY_					0	0	0		ENST00000513842.1_1_4:7765494-7800689:-|nuORF;nc|ENSG00000196526|Q8N556|AFAP1;ENSG00000196526|ENST00000420658|AFAP1;ENST00000508415.1_1_4:7790587-7795535:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7352294921875	2	516.735271	1031.45599	0.30271	0.00015642	-2.0942	-0.0010821	-1.7915	-0.00092572	516.7341396455789	43.572	0.61069	43.628	43.313	43.923	0.056747					19	14	2	0	0	0	0.62081	1	3006	3006		45.952	12.03	1	152240			56078	8068	37487	37502	63379	63379					-0.058480035870843494
STDPEALHY	9	Unmodified	_STDPEALHY_					0	0	0		ENST00000513842.1_1_4:7765494-7800689:-|nuORF;nc|ENSG00000196526|Q8N556|AFAP1;ENSG00000196526|ENST00000420658|AFAP1;ENST00000508415.1_1_4:7790587-7795535:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7349243164062	2	516.735271	1031.45599	0.021689	1.1207E-05	-1.6131	-0.00083352	-1.5914	-0.00082232	516.7344287966893	43.504	0.55257	43.454	43.182	43.735	-0.050308					24	12	3	0	0	0	0.72402	1	3005	3005		38.806	13.232	1	131210			56079	8068	37487	37502	63380	63380					-0.058480035870843494
STDPEALHY	9	Unmodified	_STDPEALHY_					0	0	0		ENST00000513842.1_1_4:7765494-7800689:-|nuORF;nc|ENSG00000196526|Q8N556|AFAP1;ENSG00000196526|ENST00000420658|AFAP1;ENST00000508415.1_1_4:7790587-7795535:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	ENST00000513842.1_1_4:7765494-7800689:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	516.735271	1031.45599	-0.35568	-0.00018379	-1.0698	-0.00055279	-1.4255	-0.00073659	516.7345321274133	43.63	0.53217	43.636	43.389	43.921	0.0065422	0.078614	0.0006654	NaN	73.975	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	152160			56080	8068	37487	37502							-0.058480035870843494
STDPRPASY	9	Unmodified	_STDPRPASY_					0	0	0		nc|ENSG00000103126|O15169-2|AXIN1;ENSG00000103126|ENST00000262320|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.23492431640625	2	497.235439	992.456324	0.27686	0.00013766	-0.29172	-0.00014505	-0.014859	-7.3885E-06	497.2351176556138	30.345	0.69905	30.37	30.019	30.718	0.025013					45	18	3	0	0	0	0.017216	5	1569	1550;1559;1569;1577;1586		127.46	61.659	1	229820			56081	2055	37488	37503	63381;63382;63383;63384;63385	63383					-0.040205838672363825
STDPRPASY	9	Unmodified	_STDPRPASY_					0	0	0		nc|ENSG00000103126|O15169-2|AXIN1;ENSG00000103126|ENST00000262320|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.235107421875	2	497.235439	992.456324	-0.19864	-9.8772E-05	0.24296	0.00012081	0.04432	2.2037E-05	497.23537485452226	30.419	0.8618	30.372	30.011	30.873	-0.047064					55	21	4	0	0	0	0.12688	4	1651	1633;1643;1651;1661		87.696	34.345	1	283960			56082	2055	37488	37503	63386;63387;63388;63389	63388					-0.040205838672363825
STDPRPASY	9	Unmodified	_STDPRPASY_					0	0	0		nc|ENSG00000103126|O15169-2|AXIN1;ENSG00000103126|ENST00000262320|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.2350158691406	2	497.235439	992.456324	-0.97912	-0.00048685	1.0868	0.00054038	0.10766	5.3531E-05	497.2358257627969	30.388	0.94661	30.373	29.891	30.837	-0.015167					56	23	3	0	0	0	0.051853	4	1593	1575;1584;1593;1602		107.01	48.226	1	279140			56083	2055	37488	37503	63390;63391;63392;63393	63392					-0.040205838672363825
STDPRPASY	9	Unmodified	_STDPRPASY_					0	0	0		nc|ENSG00000103126|O15169-2|AXIN1;ENSG00000103126|ENST00000262320|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.2333679199219	2	497.235439	992.456324	-0.66755	-0.00033193	0.74834	0.0003721	0.080791	4.0172E-05	497.2356873508865	30.476	0.61685	30.539	30.265	30.882	0.063122					59	31	3	0	0	0	0.58668	1	1348	1348		47.657	5.2612	1	167320			56084	2055	37488	37503	63394	63394					-0.040205838672363825
STDPRPASY	9	Unmodified	_STDPRPASY_					0	0	0		nc|ENSG00000103126|O15169-2|AXIN1;ENSG00000103126|ENST00000262320|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.23663330078125	2	497.235439	992.456324	0.16304	8.1067E-05	0.64495	0.00032069	0.80799	0.00040176	497.23524829299566	30.065	0.4996	30.177	29.996	30.495	0.11225					50	24	3	0	0	0	0.14236	3	1325	1313;1321;1325		85.161	39.209	1	171780			56085	2055	37488	37503	63395;63396;63397	63397					-0.040205838672363825
STDPRPASY	9	Unmodified	_STDPRPASY_					0	0	0		nc|ENSG00000103126|O15169-2|AXIN1;ENSG00000103126|ENST00000262320|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	nc|ENSG00000103126|O15169-2|AXIN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.234375	2	497.235439	992.456324	0.42922	0.00021343	-0.418	-0.00020784	0.011226	5.5822E-06	497.23507445216626	30.28	0.66148	30.278	29.988	30.649	-0.0022526					49	31	2	0	0	0	0.24527	3	1320	1320;1329;1335		69.628	25.097	1	201630			56086	2055	37488	37503	63398;63399;63400	63398					-0.040205838672363825
STDPSVLGKY	10	Unmodified	_STDPSVLGKY_					0	0	0		ENSG00000114315|ENST00000232424|HES1	ENSG00000114315|ENST00000232424|HES1	ENSG00000114315|ENST00000232424|HES1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.7742919921875	2	533.774396	1065.53424	0.18116	9.6699E-05	0.16856	8.9971E-05	0.34972	0.00018667	533.7744153269593	47.779	0.66398	47.77	47.504	48.168	-0.0093231					47	22	3	0	0	0	6.0821E-17	3	3910	3901;3910;3921		171.53	91.819	1	882820			56087	2766	37489	37504	63401;63402;63403	63402					0.004094289981594557
STDPSVLGKY	10	Unmodified	_STDPSVLGKY_					0	0	0		ENSG00000114315|ENST00000232424|HES1	ENSG00000114315|ENST00000232424|HES1	ENSG00000114315|ENST00000232424|HES1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.7747802734375	2	533.774396	1065.53424	-0.11246	-6.003E-05	0.32145	0.00017158	0.20898	0.00011155	533.7744808102588	47.656	1.2533	47.629	47.363	48.616	-0.026737					62	36	2	0	0	0	7.4855E-07	5	3987	3974;3980;3987;3996;4010		150.36	78.726	1	856570			56088	2766	37489	37504	63404;63405;63406;63407;63408	63406					0.004094289981594557
STDPSVLGKY	10	Unmodified	_STDPSVLGKY_					0	0	0		ENSG00000114315|ENST00000232424|HES1	ENSG00000114315|ENST00000232424|HES1	ENSG00000114315|ENST00000232424|HES1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.7749633789062	2	533.774396	1065.53424	0.4359	0.00023267	-0.19139	-0.00010216	0.24451	0.00013052	533.7742080087152	47.749	1.2748	47.747	47.428	48.703	-0.002449					62	39	2	0	0	0	1.6727E-07	4	3938	3921;3929;3938;3947		155.58	81.33	1	906340			56089	2766	37489	37504	63409;63410;63411;63412	63411					0.004094289981594557
STDSETLRY	9	Unmodified	_STDSETLRY_					0	0	0		ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF	ENSG00000137501|ENST00000359152|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.2503051757812	2	536.251286	1070.48802	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.035	1	37.985	37.485	38.485	-0.050369								0	0	0	0.14186	1	2640	2640		72.879	24.964	1				56090	4207	37490	37505	63413	63413					-0.04440635903938528
STDSETLRY	9	Unmodified	_STDSETLRY_					0	0	0		ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2;ENST00000438197.2_1_11:85444955-85468786:-|nuORF	ENSG00000137501|ENST00000359152|SYTL2	ENSG00000137501|ENST00000359152|SYTL2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.2499389648438	2	536.251286	1070.48802	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.124	1	38.074	37.574	38.574	-0.050369								0	0	0	0.41254	1	2652	2652		58.23	6.8945	1				56091	4207	37490	37505	63414	63414					-0.04440635903938528
STEARRQQAS	10	Unmodified	_STEARRQQAS_					0	0	0		nc|ENSG00000105662|Q6UUV9-2|CRTC1;ENSG00000105662|ENST00000321949|CRTC1;nc|ENSG00000105662|Q6UUV9-3|CRTC1	nc|ENSG00000105662|Q6UUV9-2|CRTC1	nc|ENSG00000105662|Q6UUV9-2|CRTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.2872314453125	2	567.286525	1132.5585	-1.2024	-0.00068208	4.1463	0.0023521	2.9439	0.00167	567.288700920988	109.93	0.63879	109.88	109.79	110.43	-0.055077					46	29	3	0	0	0	0.85981	1	11961	11961		35.152	0.97948	1	1162700			56092	2235	37491	37506	63415	63415					-0.0024791779560473515
STECFEMEQ	9	Unmodified	_STECFEMEQ_					0	0	0			REV__nc|ENSG00000009694|Q9UKZ4-2|TENM1	REV__nc|ENSG00000009694|Q9UKZ4-2|TENM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.2047119140625	2	552.204632	1102.39471	0.12735	7.0322E-05	1.5634	0.00086333	1.6908	0.00093366	552.2054626323405	32.864	1.6355	32.862	32.325	33.96	-0.0016327					70	38	2	0	0	0	0.64922	1	1943	1943		44.117	9.9443	1	141290	+		56093	16149	37492	37507	63416	63416					-0.1523901967304937
STFIPGTNK	9	Unmodified	_STFIPGTNK_					0	0	0		ENSG00000198670|ENST00000316300|LPA	ENSG00000198670|ENST00000316300|LPA	ENSG00000198670|ENST00000316300|LPA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.7578125	2	482.758549	963.502546	-0.66492	-0.000321	0.74821	0.00036121	0.083289	4.0208E-05	482.7586691844	39.008	0.85121	39.349	39.191	40.042	0.34187					36	19	2	0	0	0	0.30689	1	3249	3249		64.207	0	1	287520			56094	8302	37493	37508	63417	63417					0.019334810348709652
STFSKSGSYF	10	Unmodified	_STFSKSGSYF_					0	0	0		nc|ENSG00000160193|P57081-2|WDR4;ENSG00000160193|ENST00000398208|WDR4;ENST00000463902.5_1_21:44283680-44299641:-|nuORF;ENST00000492742.5_1_21:44283680-44299172:-|nuORF;ENST00000479429.5_1_21:44283680-44299605:-|nuORF	nc|ENSG00000160193|P57081-2|WDR4	nc|ENSG00000160193|P57081-2|WDR4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.759033203125	2	555.758746	1109.50294	0.054838	3.0477E-05	-0.048419	-2.6909E-05	0.0064183	3.567E-06	555.7586137373056	64.35	0.80875	64.904	64.561	65.37	0.55386					58	19	4	0	0	0	0.47091	1	6969	6969		58.23	0	1	870100			56095	5562	37494	37509	63418	63418					-0.047431440359332555
STGACNCGRKQ	11	Unmodified	_STGACNCGRKQ_					0	0	0		ENSG00000167447|ENST00000300917|SMG8;nc|ENSG00000167447|Q8ND04-2|SMG8	ENSG00000167447|ENST00000300917|SMG8	ENSG00000167447|ENST00000300917|SMG8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.7589111328125	2	562.750407	1123.48626	-0.015938	-8.9691E-06	1.4934	0.00084042	1.4775	0.00083145	562.7492797878698	48.037	0.19791	48.96	48.864	49.062	0.92315					5	4	2	0	0	0	0.17457	1	4619	4619		35.152	3.6222	1	81551			56096	6292	37495	37510	63419	63419					-0.07054291465215101
STGHLAPE	8	Unmodified	_STGHLAPE_					0	0	0		ENST00000424605.5_1_9:2535977-2539406:-|nuORF	ENST00000424605.5_1_9:2535977-2539406:-|nuORF	ENST00000424605.5_1_9:2535977-2539406:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7854309082031	2	406.200867	810.387182	2.7343	0.0011107	-2.1403	-0.00086941	0.59393	0.00024126	406.2002871152215	29.968	0.41006	29.953	29.754	30.164	-0.015167					13	8	3	0	0	0	0.4196	1	1524	1524		11.511	7.8267	1	19358			56097	11518	37496	37511	63420	63420					-0.025596230961355104
STGKTTAIL	9	Unmodified	_STGKTTAIL_					0	0	0		ENSG00000180269|ENST00000570682|GPR139	ENSG00000180269|ENST00000570682|GPR139	ENSG00000180269|ENST00000570682|GPR139	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2597351074219	2	446.260925	890.507297	1.3587	0.00060635	-2.2404	-0.00099979	-0.88163	-0.00039344	446.25987846269135	34.697	0.85524	35.078	34.893	35.749	0.3812					43	21	5	0	0	0	0.78058	1	2618	2618		30.504	3.8107	1	9488300			56098	7323	37497	37512	63421	63421					0.057663651776124425
STGLGGFLYV	10	Unmodified	_STGLGGFLYV_					0	0	0			REV__ENSG00000124766|ENST00000244745|SOX4	REV__ENSG00000124766|ENST00000244745|SOX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	507.7681884765625	2	507.26875	1012.52295	-0.51331	-0.00026039	-0.46684	-0.00023682	-0.98016	-0.0004972	507.2687202277462	34.159	0.41739	34.205	33.945	34.362	0.045853					26	20	2	0	0	0	0.86718	1	1705	1705		27.882	1.1893	1	65373	+		56099	18609	37498	37513	63422	63422					0.01718651694648088
STGLSLKK	8	Unmodified	_STGLSLKK_					0	0	0		ENSG00000148798|ENST00000369849|INA	ENSG00000148798|ENST00000369849|INA	ENSG00000148798|ENST00000369849|INA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2591247558594	2	417.258185	832.501818	-0.38397	-0.00016022	1.2525	0.00052261	0.86852	0.0003624	417.2585749889359	22.175	2.752	22.117	21.499	24.251	-0.05867					139	87	2	0	0	0	0.79929	1	723	723		18.324	0.95945	1	87379			56100	4982	37499	37514	63423	63423					0.07886686385802477
STGNVRKLV	9	Unmodified	_STGNVRKLV_					0	0	0		ENSG00000112818|ENST00000230588|MEP1A	ENSG00000112818|ENST00000230588|MEP1A	ENSG00000112818|ENST00000230588|MEP1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.2923278808594	2	487.293091	972.571629	-0.95487	-0.0004653	1.1127	0.0005422	0.1578	7.6897E-05	487.2935206291715	91.355	2.0771	91.355	90.861	92.938	0					114	48	4	0	0	0	0.76255	1	8980	8980		35.618	0	1	1437600			56101	2684	37500	37515	63424	63424					0.08424565054428967
STGVIKLSS	9	Unmodified	_STGVIKLSS_					0	0	0		nc|ENSG00000170579|O14490-6|DLGAP1;chr18:3814273-3845232|26|20.85|0.69|4.91|-|ENST00000539435|DLGAP1,DLGAP1	nc|ENSG00000170579|O14490-6|DLGAP1	nc|ENSG00000170579|O14490-6|DLGAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	446.25982666015625	2	446.260925	890.507297	0.0023308	1.0401E-06	-0.76501	-0.00034139	-0.76268	-0.00034035	446.2604969440352	34.751	0.79046	34.961	34.687	35.478	0.21003					41	19	4	0	0	0	0.67345	1	2599	2599		42.396	3.59	1	8464700			56102	252	37501	37516	63425	63425					0.057663651776124425
STGVTKLK	8	Unmodified	_STGVTKLK_					0	0	0		ENSG00000240563|ENST00000498273|L1TD1	ENSG00000240563|ENST00000498273|L1TD1	ENSG00000240563|ENST00000498273|L1TD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.25830078125	2	417.258185	832.501818	0.73077	0.00030492	0.058378	2.4359E-05	0.78915	0.00032928	417.25810331191536	21.663	2.6932	21.727	21.148	23.842	0.064745					160	99	2	0	0	0	0.80308	1	624	624		16.473	4.2663	1	105380			56103	8780	37502	37517	63426	63426					0.07886686385813846
STGVVLMGIL	10	Unmodified	_STGVVLMGIL_					0	0	0			REV__nc|ENSG00000036565|P54219-2|SLC18A1	REV__nc|ENSG00000036565|P54219-2|SLC18A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7799377441406	2	495.288628	988.562703	-0.60005	-0.0002972	3.9403	0.0019516	3.3403	0.0016544	495.2914476123526	83.222	0.47575	83.387	83.148	83.624	0.1651					15	10	2	0	0	0	0.37624	1	8073	8073		6.3127	0	1	60063	+		56104	16294	37503	37518	63427	63427					0.06796455373762456
STGVYFSAVK	10	Unmodified	_STGVYFSAVK_					0	0	0		nc|ENSG00000144837|Q53H76-2|PLA1A;nc|ENSG00000144837|Q53H76-3|PLA1A;ENSG00000144837|ENST00000273371|PLA1A	nc|ENSG00000144837|Q53H76-2|PLA1A	nc|ENSG00000144837|Q53H76-2|PLA1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.781005859375	2	529.779482	1057.54441	0.39727	0.00021047	2.2648	0.0011998	2.6621	0.0014103	529.7805033326848	52.561	0.93292	52.632	52.338	53.271	0.070709					49	28	3	0	0	0	0.81117	1	4237	4237		38.754	5.9412	1	423790			56105	4735	37504	37519	63428	63428					0.017940367233904908
STGYEIDG	8	Unmodified	_STGYEIDG_					0	0	0		nc|ENSG00000172869|Q9Y485|DMXL1;ENSG00000172869|ENST00000539542|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1915588378906	2	421.18234	840.350128	-0.60347	-0.00025417	-2.9235	-0.0012313	-3.527	-0.0014855	421.1809967715372	92.068	1.102	92.531	92.149	93.251	0.46249					34	25	2	0	0	0	0.4196	1	11069	11069		7.6903	3.374	1	107840			56106	6802	37505	37520	63429	63429					-0.0764333943255906
STGYEIDG	8	Unmodified	_STGYEIDG_					0	0	0		nc|ENSG00000172869|Q9Y485|DMXL1;ENSG00000172869|ENST00000539542|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	421.18234	840.350128	1.6156	0.00068044	-5.2349	-0.0022049	-3.6194	-0.0015244	421.18001928106355	92.02	0.89452	92.467	92.137	93.032	0.44661	-0.032095	-0.0011905	NaN	7.6903	33	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127320			56107	6802	37505	37520							-0.0764333943255906
STHCESSLY	9	Unmodified	_STHCESSLY_					0	0	0			REV__nc|ENSG00000126337|O76013-2|KRT36	REV__nc|ENSG00000126337|O76013-2|KRT36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.7117919921875	2	513.713482	1025.41241	-0.025911	-1.3311E-05	-3.5254	-0.001811	-3.5513	-0.0018244	513.711552203164	35.018	0.52916	35.006	34.807	35.336	-0.012203					21	13	2	0	0	0	0.62081	1	2156	2156		45.952	5.3793	1	66461	+	+	56108	15969	37506	37521	63430	63430					-0.09927936355848033
STILLSLPVC	10	Unmodified	_STILLSLPVC_					0	0	0			REV__ENST00000524570.5_1_8:144905008-144905152:-|nuORF	REV__ENST00000524570.5_1_8:144905008-144905152:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3036499023438	2	523.301736	1044.58892	1.4247	0.00074556	1.9478	0.0010193	3.3725	0.0017648	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.86452	1	9078	9078		30.504	0.6621	1	3882100	+		56109	28168	37507	37522	63431	63431					0.06840724545213561
STILLSLPVC	10	Unmodified	_STILLSLPVC_					0	0	0			REV__ENST00000524570.5_1_8:144905008-144905152:-|nuORF	REV__ENST00000524570.5_1_8:144905008-144905152:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.303466796875	2	523.301736	1044.58892	-0.1734	-9.0741E-05	3.5089	0.0018362	3.3355	0.0017455	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.86589	1	9068	9068		29.15	0	1	13808000	+		56110	28168	37507	37522	63432	63432					0.06840724545213561
STINLKEM	8	Unmodified	_STINLKEM_					0	0	0		nc|ENSG00000103710|Q9NYN1-3|RASL12;nc|ENSG00000103710|Q9NYN1-2|RASL12;ENSG00000103710|ENST00000220062|RASL12	nc|ENSG00000103710|Q9NYN1-3|RASL12	nc|ENSG00000103710|Q9NYN1-3|RASL12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2449035644531	2	468.24696	934.479368	-0.76235	-0.00035697	-2.8338	-0.0013269	-3.5962	-0.0016839	468.24549296496195	47.46	2.028	47.434	46.94	48.968	-0.026737					112	56	3	0	0	0	0.93293	1	3963	3963		51.335	1.8939	1	1887700			56111	2097	37508	37523	63433	63433					0.009507189258897597
STINLKEM	8	Unmodified	_STINLKEM_					0	0	0		nc|ENSG00000103710|Q9NYN1-3|RASL12;nc|ENSG00000103710|Q9NYN1-2|RASL12;ENSG00000103710|ENST00000220062|RASL12	nc|ENSG00000103710|Q9NYN1-3|RASL12	nc|ENSG00000103710|Q9NYN1-3|RASL12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.24505615234375	2	468.24696	934.479368	-0.27928	-0.00013077	-3.2936	-0.0015422	-3.5729	-0.001673	468.2452890208871	47.437	2.6016	47.349	46.711	49.313	-0.08765					186	72	4	0	0	0	0.93786	1	3577	3577		53.351	2.016	1	6668700			56112	2097	37508	37523	63434	63434					0.009507189258897597
STKEARRP	8	Unmodified	_STKEARRP_					0	0	0			REV__ENSG00000038219|ENST00000040738|BOD1L1	REV__ENSG00000038219|ENST00000040738|BOD1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7672119140625	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.89962	1	8490	8490		38.806	3.1879	1	547170	+		56113	16300	37509	37524	63435	63435					0.045908213605116543
STKPPLDRSL	10	Unmodified	_STKPPLDRSL_					0	0	0		ENSG00000043462|ENST00000046794|LCP2	ENSG00000043462|ENST00000046794|LCP2	ENSG00000043462|ENST00000046794|LCP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	557.2456665039062	2	557.316763	1112.61897	0.9573	0.00053352	-1.1125	-0.00062002	-0.15521	-8.6504E-05	557.3159614481201	22.084	0.36031	21.641	21.54	21.9	-0.44324					12	7	2	0	0	0	0.37624	1	860	860		16.717	0.24424	1	61532			56114	942	37510	37525	63436	63436					0.06716799534751772
STKQLRRWLRW	11	Unmodified	_STKQLRRWLRW_					0	0	0			REV__ENST00000411552.5_1_7:30498788-30515497:-|nuORF	REV__ENST00000411552.5_1_7:30498788-30515497:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.63397216796875	3	510.631909	1528.8739	1.9809	0.0010115	3.5247	0.0017998	5.5056	0.0028114	510.63303476762127	104.3	2.045	104.49	103.76	105.81	0.18887					109	51	3	0	0	0	0.81892	1	12660	12660		8.0344	0.22983	1	329880	+		56115	26369	37511	37526	63437	63437					0.1306170579364334
STKRMTLSKDI	11	Unmodified	_STKRMTLSKDI_					0	0	0			REV__nc|ENSG00000131781|P49326-3|FMO5	REV__nc|ENSG00000131781|P49326-3|FMO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.359619140625	2	640.355562	1278.69657	1.6035	0.0010268	3.5576	0.0022781	5.161	0.0033049	640.3577368030512	99.407	2.6879	99.454	98.409	101.1	0.047531					162	62	4	0	0	0	0.6493	1	10686	10686		38.754	3.6016	1	584870	+		56116	29844	37512	37527	63438	63438					0.06837069408629759
STKSGGKQEW	10	Unmodified	_STKSGGKQEW_					0	0	0			REV__ENST00000608531.1_1_2:91831346-91843483:-|nuORF	REV__ENST00000608531.1_1_2:91831346-91843483:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	554.2765502929688	2	554.275095	1106.53564	-0.31344	-0.00017373	3.265	0.0018097	2.9516	0.001636	554.2772058796023	63.977	1.4864	64.004	63.353	64.839	0.027138					74	46	3	0	0	0	0.16188	2	6013	5993;6013		93.598	14.095	1	282550	+		56117	18884	37513	37528	63439;63440	63440					-0.013369369130941777
STKSVRLVQ	9	Unmodified	_STKSVRLVQ_					0	0	0		ENSG00000124257|ENST00000372518|NEURL2	ENSG00000124257|ENST00000372518|NEURL2	ENSG00000124257|ENST00000372518|NEURL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2695617675781	2	509.306198	1016.59784	0.6307	0.00032122	0.022202	1.1308E-05	0.6529	0.00033253	509.30615538893375	16.997	0.3016	16.514	16.417	16.718	-0.48256					12	6	3	0	0	0	0.20789	1	215	215		66.429	0	1	143350			56118	3325	37514	37529	63441	63441					0.09020834225907493
STLDDLVSRY	10	Unmodified	_STLDDLVSRY_					0	0	0			REV__nc|ENSG00000225830|P0DP91|ERCC6;REV__ENSG00000225830|ENST00000355832|ERCC6	REV__nc|ENSG00000225830|P0DP91|ERCC6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.2971801757812	2	584.79586	1167.57717	-0.5686	-0.00033251	2.9399	0.0017192	2.3713	0.0013867	585.2975683106702	76.202	0.70881	76.602	76.201	76.909	0.3997					37	16	4	0	0	0	0.64457	1	8656	8656		47.657	1.6851	1	360490	+		56119	30209;23740	37515	37530	63442	63442					8.199055582736037E-05
STLGSMLP	8	Unmodified	_STLGSMLP_					0	0	0		ENSG00000111752|ENST00000544916|PHC1	ENSG00000111752|ENST00000544916|PHC1	ENSG00000111752|ENST00000544916|PHC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2089538574219	2	403.209847	804.40514	-1.8186	-0.00073328	-0.268	-0.00010806	-2.0866	-0.00084134	403.20969687299277	85.674	2.1245	85.86	85.144	87.269	0.18523					94	49	3	0	0	0	0.81548	1	8419	8419		20.482	0	1	1250400			56120	2610	37516	37531	63443	63443					-0.004886241656436141
STLHSLVKL	9	Unmodified	_STLHSLVKL_					0	0	0		nc|ENSG00000133067|Q9HBX8-2|LGR6;ENST00000487787.5_1_1:202275897-202288332:+|nuORF;nc|ENSG00000133067|Q9HBX8-1|LGR6;ENSG00000133067|ENST00000367278|LGR6	nc|ENSG00000133067|Q9HBX8-2|LGR6	nc|ENSG00000133067|Q9HBX8-2|LGR6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.3056640625	2	499.305667	996.596781	-0.37246	-0.00018597	0.86347	0.00043114	0.49102	0.00024517	499.30608248547827	25.919	0.81447	25.662	25.175	25.99	-0.2572					43	18	4	0	0	0	0.64922	1	1388	1388		44.117	0	1	198600			56121	14925	37517	37532	63444	63444					0.09834619856997051
STLIIPKP	8	Unmodified	_STLIIPKP_					0	0	0		ENSG00000156920|ENST00000394143|ADGRG4;nc|ENSG00000156920|Q8IZF6-2|ADGRG4;nc|ENSG00000156920|Q8IZF6-3|ADGRG4	ENSG00000156920|ENST00000394143|ADGRG4	ENSG00000156920|ENST00000394143|ADGRG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7798156738281	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.85277	1	3349	3349		25.45	4.9683	1	17256000			56122	5401	37518	37533	63445	63445					0.10388447425282266
STLILILPIL	10	Unmodified	_STLILILPIL_					0	0	0			REV__ENSG00000204701|ENST00000641151|OR2J3	REV__ENSG00000204701|ENST00000641151|OR2J3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.373291015625	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.84874	1	2490	2490		18.324	0.95945	1	314410	+		56123	23517	37519	37534	63446	63446					0.18790680278902983
STLINMSQEP	10	Unmodified	_STLINMSQEP_					0	0	0			REV__ENST00000481317.1_1_2:101644970-101648871:-|nuORF	REV__ENST00000481317.1_1_2:101644970-101648871:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3403930664062	2	560.271164	1118.52777	-0.40884	-0.00022906	-2.2211	-0.0012444	-2.6299	-0.0014735	560.2691525246948	102.54	0.5941	102.54	102.32	102.91	0					29	14	3	0	0	0	0.37624	1	10519	10519		22.58	0	1	195890	+		56124	27437	37520	37535	63447	63447					-0.0267483222487499
STLIVWRV	8	Unmodified	_STLIVWRV_					0	0	0			REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|100|3|sense	REV__HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|100|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.2927551269531	2	487.295102	972.575651	-0.95486	-0.0004653	-3.015	-0.0014692	-3.9698	-0.0019345	487.2935206291715	91.355	2.0771	91.355	90.861	92.938	0					114	48	4	0	0	0	0.88915	1	8967	8967		35.201	8.4046	1	1437600	+		56125	29438	37521	37536	63448	63448					0.0882665454812468
STLKGPRKVPL	11	Unmodified	_STLKGPRKVPL_					0	0	0			REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3804321289062	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.73893	1	2737	2737		24.519	0.99649	1	352020	+		56126	29779	37522	37537	63449	63449					0.15525931110823876
STLKGPRKVPL	11	Unmodified	_STLKGPRKVPL_					0	0	0			REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.38232421875	2	598.379697	1194.74484	-0.74115	-0.00044349	3.5243	0.0021089	2.7832	0.0016654	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.70737	1	3089	3089		30.318	5.7985	1	772980	+		56127	29779	37522	37537	63450	63450					0.15525931110823876
STLKGPRKVPL	11	Unmodified	_STLKGPRKVPL_					0	0	0			REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	REV__nc|ENSG00000111877|Q9NXL9-4|MCM9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3818969726562	2	598.379697	1194.74484	-1.3328	-0.00079753	3.7818	0.002263	2.449	0.0014655	598.3818526094551	40.308	0.87541	40.701	40.092	40.968	0.39209					91	22	5	0	0	0	0.7342	1	3371	3371		25.574	1.0549	1	10750000	+		56128	29779	37522	37537	63451	63451					0.15525931110823876
STLLSLVGL	9	Unmodified	_STLLSLVGL_					0	0	0		ENSG00000198326|ENST00000380585|TMEM239;nc|ENSG00000198326|Q8WW34|TMEM239	ENSG00000198326|ENST00000380585|TMEM239	ENSG00000198326|ENST00000380585|TMEM239	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.780029296875	2	451.781493	901.548434	1.0261	0.00046357	-4.2891	-0.0019377	-3.263	-0.0014742	451.779676395938	86.614	1.2405	86.669	86.189	87.43	0.055641					81	28	4	0	0	0	0.77546	1	8845	8845		31.955	1.4512	1	295460			56129	8265	37523	37538	63452	63452					0.09372126217101595
STLRLTKK	8	Unmodified	_STLRLTKK_					0	0	0			REV__nc|ENSG00000134324|Q14693|LPIN1	REV__nc|ENSG00000134324|Q14693|LPIN1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.8047790527344	2	473.805834	945.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.22	1	18.591	18.091	19.091	-0.6296								0	0	0	0.30252	1	492	492		19.36	1.0356	1		+		56130	19135	37524	37539	63453	63453					0.122140395768497
STLRRGPTG	9	Unmodified	_STLRRGPTG_					0	0	0		ENST00000361317.6_1_20:62688765-62688933:+|nuORF	ENST00000361317.6_1_20:62688765-62688933:+|nuORF	ENST00000361317.6_1_20:62688765-62688933:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.76690673828125	2	472.76724	943.519927	0.62555	0.00029574	-0.6042	-0.00028565	0.02135	1.0094E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.73802	1	8051	8051		37.812	4.9991	1	508030			56131	10471	37525	37540	63454	63454					0.04590821360523023
STLSPLVPL	9	Unmodified	_STLSPLVPL_					0	0	0		ENST00000361874.7_1_2:74588525-74588612:-|nuORF;ENST00000451608.2_1_2:74588266-74588612:-|nuORF	ENST00000361874.7_1_2:74588525-74588612:-|nuORF	ENST00000361874.7_1_2:74588525-74588612:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7796325683594	2	463.781493	925.548434	-0.87225	-0.00040453	-3.6133	-0.0016758	-4.4855	-0.0020803	463.7798455403882	38.467	1.081	38.99	38.633	39.714	0.52235					66	25	3	0	0	0	0.5393	1	3235	3235		50.025	2.1089	1	2514600			56132	10495	37526	37541	63455	63455					0.08268126217080862
STLSVPLIV	9	Unmodified	_STLSVPLIV_					0	0	0			REV__ENST00000398632.3_1_21:42774955-42775423:+|nuORF	REV__ENST00000398632.3_1_21:42774955-42775423:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.79046630859375	2	464.789318	927.564084	-0.014658	-6.8129E-06	3.0233	0.0014052	3.0086	0.0013984	464.7906118209948	36.96	1.5179	36.936	36.1	37.617	-0.023979					72	33	3	0	0	0	0.7932	1	2329	2329		23.042	0	1	237030	+		56133	26210	37527	37542	63456	63456					0.0974041273415196
STLTFVTL	8	Unmodified	_STLTFVTL_					0	0	0		ENST00000277795.8_1_10:70048686-70066625:-|nuORF;nc|ENSG00000108187|P30039-2|PBLD;ENSG00000108187|ENST00000358769|PBLD	ENST00000277795.8_1_10:70048686-70066625:-|nuORF	ENST00000277795.8_1_10:70048686-70066625:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.7659606933594	2	441.252569	880.490584	-0.12194	-5.3808E-05	2.2195	0.00097938	2.0976	0.00092557	441.25383447549854	35.716	0.31932	35.704	35.517	35.836	-0.012203					10	6	2	0	0	0	0.4196	1	2236	2236		18.324	5.3652	1	20107			56134	2395	37528	37543	63457	63457					0.04555864291671696
STLTFVTL	8	Unmodified	_STLTFVTL_					0	0	0		ENST00000277795.8_1_10:70048686-70066625:-|nuORF;nc|ENSG00000108187|P30039-2|PBLD;ENSG00000108187|ENST00000358769|PBLD	ENST00000277795.8_1_10:70048686-70066625:-|nuORF	ENST00000277795.8_1_10:70048686-70066625:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	441.252569	880.490584	0.15797	6.9704E-05	-3.2643	-0.0014404	-3.1063	-0.0013707	441.2497829345324	35.998	0.12581	36.101	36.019	36.145	0.10306	0.21917	-0.00079783	NaN	12.207	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38204			56135	2395	37528	37543							0.04555864291671696
STLTIWDL	8	Unmodified	_STLTIWDL_					0	0	0		ENST00000557815.1_1_15:70346775-70346994:-|nuORF;nc|ENSG00000140332|Q04726-2|TLE3;nc|ENSG00000140332|Q04726-7|TLE3;nc|ENSG00000140332|Q04726-3|TLE3;nc|ENSG00000140332|Q04726-6|TLE3;ENSG00000140332|ENST00000451782|TLE3;nc|ENSG00000140332|Q04726|TLE3;nc|ENSG00000140332|Q04726-4|TLE3	ENST00000557815.1_1_15:70346775-70346994:-|nuORF	ENST00000557815.1_1_15:70346775-70346994:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.75701904296875	2	474.755475	947.496398	-0.26755	-0.00012702	4.1066	0.0019497	3.8391	0.0018226	474.7572062163695	96.066	1.0332	96.471	96.012	97.045	0.40452					60	24	3	0	0	0	0.15891	2	11566	11566;11577		110.34	6.3378	1	979400			56136	4427	37529	37544	63458;63459	63458					0.02054962803322269
STLVKTSY	8	Unmodified	_STLVKTSY_					0	0	0			REV__ENSG00000101544|ENST00000262198|ADNP2	REV__ENSG00000101544|ENST00000262198|ADNP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.7477722167969	2	449.74765	897.480748	-1.3642	-0.00061355	1.4031	0.00063104	0.038886	1.7489E-05	449.74808565316704	36.673	0.80136	36.696	36.228	37.029	0.023624					36	22	2	0	0	0	0.86677	1	2028	2028		27.882	0	1	120090	+		56137	17288	37530	37545	63460	63460					0.02790676286292637
STMPKPPKPPL	11	Unmodified	_STMPKPPKPPL_					0	0	0			REV__nc|ENSG00000117461|Q92569-2|PIK3R3	REV__nc|ENSG00000117461|Q92569-2|PIK3R3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.3032836914062	2	596.841559	1191.66857	-0.41649	-0.00024858	3.4059	0.0020328	2.9894	0.0017842	596.8434681421502	31.473	0.55898	31.553	31.297	31.856	0.079836					15	12	2	0	0	0	0.17472	1	2165	2165		24.519	8.8774	1	164120	+		56138	18263	37531	37546	63461	63461					0.08039791219198378
STNKQELN	8	Unmodified	_STNKQELN_					0	0	0		ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.233642578125	2	467.235439	932.456324	-0.63924	-0.00029868	-3.9625	-0.0018514	-4.6018	-0.0021501	467.2335443561671	68.394	1.2899	68.358	67.994	69.284	-0.036301					131	48	4	0	0	0	0.88185	1	6668	6668		32.812	3.6629	1	1309700			56139	6488	37532	37547	63462	63462					-0.012605838672357095
STPGERSPDS	10	Unmodified	_STPGERSPDS_					0	0	0			REV__chrX:102599847-102601880|21|10.05|0.59|4.1|+|2|ARMCX5-GPRASP2,ARMCX5-GPRASP2|1	REV__chrX:102599847-102601880|21|10.05|0.59|4.1|+|2|ARMCX5-GPRASP2,ARMCX5-GPRASP2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7344360351562	2	516.73326	1031.45197	0.021689	1.1207E-05	2.2794	0.0011778	2.3011	0.0011891	516.7344287966893	43.504	0.55257	43.454	43.182	43.735	-0.050308					24	12	3	0	0	0	0.8545	1	2994	2994		36.447	0.82846	1	131210	+		56140	15942	37533	37548	63463	63463					-0.06250093080802799
STPPGESY	8	Unmodified	_STPPGESY_					0	0	0		ENSG00000167978|ENST00000301740|SRRM2;nc|ENSG00000167978|Q9UQ35-2|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1839904785156	2	419.184883	836.355213	-0.57397	-0.0002406	-3.0028	-0.0012587	-3.5768	-0.0014993	419.1838227050264	86.505	1.1853	86.959	86.534	87.719	0.4543					81	28	5	0	0	0	0.884	1	10158	10158		33.516	6.7195	1	2728000			56141	6348	37534	37549	63464	63464					-0.06951035569943542
STQRLLGGGE	10	Unmodified	_STQRLLGGGE_					0	0	0			REV__nc|ENSG00000142405|P59046-3|NLRP12	REV__nc|ENSG00000142405|P59046-3|NLRP12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2697448730469	2	509.269813	1016.52507	0.97419	0.00049612	-0.98007	-0.00049912	-0.0058787	-2.9939E-06	509.26916380298894	17.067	0.8777	16.456	16.095	16.972	-0.6107					42	19	4	0	0	0	0.27582	1	226	226		75.043	12.936	1	585550	+		56142	29899	37535	37550	63465	63465					0.017470804324943856
STQRLLGGGE	10	Unmodified	_STQRLLGGGE_					0	0	0			REV__nc|ENSG00000142405|P59046-3|NLRP12	REV__nc|ENSG00000142405|P59046-3|NLRP12	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	509.269813	1016.52507	0.97419	0.00049612	-0.98007	-0.00049912	-0.0058787	-2.9939E-06	509.26916380298894	17.067	0.8777	16.456	16.095	16.972	-0.6107	-0.07082	-0.00013488	NaN	75.043	42	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	585550	+		56143	29899	37535	37550							0.017470804324943856
STRAVAPQK	9	Unmodified	_STRAVAPQK_					0	0	0		nc|ENSG00000123191|P35670-3|ATP7B;nc|ENSG00000123191|P35670-4|ATP7B;ENSG00000123191|ENST00000242839|ATP7B;nc|ENSG00000123191|P35670-2|ATP7B;ENST00000483772.1_1_13:52538956-52548098:-|nuORF	nc|ENSG00000123191|P35670-3|ATP7B	nc|ENSG00000123191|P35670-3|ATP7B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2774353027344	2	479.277441	956.540328	-0.72512	-0.00034753	0.71589	0.00034311	-0.0092246	-4.4211E-06	479.2776647840579	81.814	2.7236	82.314	80.88	83.603	0.49967					179	66	3	0	0	0	0.73802	1	9617	9617		37.812	1.3648	1	1822400			56144	3264	37536	37551	63466	63466					0.06031992020314192
STRERLLSA	9	Unmodified	_STRERLLSA_					0	0	0		ENSG00000136146|ENST00000258648|MED4;ENST00000417167.2_2_13:48667798-48669175:-|nuORF	ENSG00000136146|ENST00000258648|MED4	ENSG00000136146|ENST00000258648|MED4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7937622070312	2	516.793455	1031.57236	-0.047501	-2.4548E-05	0.082016	4.2386E-05	0.034515	1.7837E-05	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.77696	1	8965	8965		31.53	0	1	692890			56145	4091	37537	37552	63467	63467					0.05783359703491442
STRPPTLSPIP	11	Unmodified	_STRPPTLSPIP_					0	0	0		ENSG00000139687|ENST00000267163|RB1	ENSG00000139687|ENST00000267163|RB1	ENSG00000139687|ENST00000267163|RB1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.3351440429688	2	583.332413	1164.65027	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.252	1	94.684	94.184	95.184	0.4324								0	0	0	0.56276	1	11246	11246		26.063	0.48933	1				56146	4390	37538	37553	63468	63468					0.07453372568852501
STRSLVGRTMK	11	Unmodified	_STRSLVGRTMK_					0	0	0			REV__ENSG00000103534|ENST00000542583|TMC5	REV__ENSG00000103534|ENST00000542583|TMC5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.3460083007812	2	618.348071	1234.68159	0.89262	0.00055195	-4.3886	-0.0027137	-3.496	-0.0021617	618.3452359789501	97.829	3.1632	97.989	96.92	100.08	0.16073					214	73	4	0	0	0	0.69248	1	10191	10191		32.751	3.5805	1	874220	+		56147	17418	37539	37554	63469	63469					0.07363622331286024
STRSVSSSSYR	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))STRSVSSSSYR_					1	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	629.8045654296875	2	629.804748	1257.59494	0.11625	7.3214E-05	-0.12794	-8.0579E-05	-0.011695	-7.3657E-06	629.8045908375641	30.944	0.75718	30.963	30.675	31.432	0.01836					59	20	4	0	0	0	0.14645	3	1634	1626;1634;1644		82.494	36.038	1	716840			56148	869	37540	37555	63470;63471;63472	63471					-0.023550856895553807
STRSVSSSSYR	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))STRSVSSSSYR_					1	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	629.804443359375	2	629.804748	1257.59494	-0.18818	-0.00011851	0.10658	6.7121E-05	-0.081601	-5.1393E-05	629.8047649199578	31.023	0.86228	30.976	30.661	31.524	-0.047062					61	21	4	0	0	0	2.4883E-09	5	1732	1715;1724;1732;1742;1751		155.53	90.068	1	665780			56149	869	37540	37555	63473;63474;63475;63476;63477	63475					-0.023550856895553807
STRSVSSSSYR	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))STRSVSSSSYR_					1	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	629.8040771484375	2	629.804748	1257.59494	0.46075	0.00029018	-0.61103	-0.00038483	-0.15028	-9.4649E-05	629.8043291034552	30.939	0.84572	30.929	30.626	31.472	-0.010656					61	20	4	0	0	0	0.05064	3	1648	1648;1657;1669		102.06	38.368	1	797940			56150	869	37540	37555	63478;63479;63480	63478					-0.023550856895553807
STRSVSSSSYR	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))STRSVSSSSYR_					1	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	629.804748	1257.59494	-0.67403	-0.0004245	0.21901	0.00013793	-0.45502	-0.00028657	629.8048392911991	31.064	0.26422	31.144	30.989	31.254	0.079834	0.14086	0.00047819	NaN	155.53	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38791			56151	869	37540	37555							-0.023550856895553807
STSCPPLP	8	Unmodified	_STSCPPLP_					0	0	0			REV__ENST00000332118.10_1_11:126138602-126138713:-|nuORF	REV__ENST00000332118.10_1_11:126138602-126138713:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	401.1941833496094	2	401.194196	800.37384	-1.7271	-0.00069291	-1.0481	-0.0004205	-2.7752	-0.0011134	401.19360802002416	82.242	0.77246	82.368	81.975	82.747	0.12601					25	17	2	0	0	0	0.89457	1	7862	7862		37.028	1.8278	1	129770	+		56152	25135	37541	37556	63481	63481					-0.03433197199740334
STSLCFGH	8	Unmodified	_STSLCFGH_					0	0	0		nc|ENSG00000049247|O95399-2|UTS2	nc|ENSG00000049247|O95399-2|UTS2	nc|ENSG00000049247|O95399-2|UTS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.19158935546875	2	426.189445	850.364338	2.8934	0.0012331	1.8215	0.00077632	4.7149	0.0020094	426.1900410770337	101.89	0.68951	102.22	101.93	102.62	0.3251					39	15	3	0	0	0	0.85277	1	12417	12417		25.45	0	1	572890			56153	14749	37542	37557	63482	63482					-0.06682965485265413
STSTAKKK	8	Unmodified	_STSTAKKK_					0	0	0			REV__nc|ENSG00000184368|Q96T17-5|MAP7D2	REV__nc|ENSG00000184368|Q96T17-5|MAP7D2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	425.2218933105469	2	425.753267	849.491981	-1.1726	-0.00049926	0.010822	4.6074E-06	-1.1618	-0.00049465	425.75326510435883	88.701	0.87894	88.701	88.293	89.172	0					24	20	2	0	0	0	0.4196	1	8548	8548		7.1934	5.9882	1	82000	+		56154	22669	37543	37558	63483	63483					0.06121498380423418
STTATTPRVI	10	Unmodified	_STTATTPRVI_					0	0	0		ENSG00000164694|ENST00000297267|FNDC1;nc|ENSG00000164694|Q4ZHG4-2|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.79296875	2	523.795663	1045.57677	0.099108	5.1912E-05	-3.5431	-0.0018559	-3.444	-0.001804	523.7937036505126	19.091	1.2071	19.017	18.843	20.05	-0.073702					63	35	3	0	0	0	0.86272	1	444	444		24.519	0.99649	1	115810			56155	5993	37544	37559	63484	63484					0.055808241263775926
STTGFDKS	8	Unmodified	_STTGFDKS_					0	0	0		ENSG00000054118|ENST00000354618|THRAP3	ENSG00000054118|ENST00000354618|THRAP3	ENSG00000054118|ENST00000354618|THRAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.6985168457031	2	421.698158	841.381762	-0.18181	-7.6669E-05	1.0531	0.00044407	0.87125	0.00036741	421.69834318779186	58.402	0.61375	58.389	58.04	58.654	-0.013641					29	19	2	0	0	0	0.87479	1	5311	5311		30.504	5.0535	1	93540			56156	1015	37545	37560	63485	63485					-0.0452734667861705
STTLLLPLV	9	Unmodified	_STTLLLPLV_					0	0	0			REV__ENSG00000172869|ENST00000539542|DMXL1	REV__ENSG00000172869|ENST00000539542|DMXL1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8055725097656	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.641	1	42.612	42.112	43.112	-0.029461								0	0	0	0.31472	1	3198	3198		25.45	1.2474	1		+		56157	21860	37546	37561	63486	63486					0.11580985768227947
STTLLLPLV	9	Unmodified	_STTLLLPLV_					0	0	0			REV__ENSG00000172869|ENST00000539542|DMXL1	REV__ENSG00000172869|ENST00000539542|DMXL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.80584716796875	2	478.804968	955.595384	0.22693	0.00010865	2.6093	0.0012493	2.8362	0.001358	478.8061448766097	39.22	1.8064	39.308	38.205	40.011	0.088375					88	52	2	0	0	0	0.7932	1	2396	2396		25.45	1.2474	1	295310	+		56158	21860	37546	37561	63487	63487					0.11580985768227947
STTLLLPLV	9	Unmodified	_STTLLLPLV_					0	0	0			REV__ENSG00000172869|ENST00000539542|DMXL1	REV__ENSG00000172869|ENST00000539542|DMXL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.80450439453125	2	478.804968	955.595384	-1.5052	-0.00072068	2.5191	0.0012062	1.0139	0.00048547	478.80603662682483	40.745	0.82938	41.137	40.796	41.625	0.39209					62	23	3	0	0	0	0.78058	1	3532	3532		30.504	6.3009	1	3674000	+		56159	21860	37546	37561	63488	63488					0.11580985768227947
STVGYRNK	8	Unmodified	_STVGYRNK_					0	0	0		ENST00000552606.1_1_12:82750710-82752155:-|nuORF;ENSG00000133773|ENST00000256151|CCDC59	ENST00000552606.1_1_12:82750710-82752155:-|nuORF	ENST00000552606.1_1_12:82750710-82752155:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	462.74981689453125	2	462.748516	923.482479	0.10407	4.8158E-05	3.8739	0.0017926	3.978	0.0018408	462.75015687401225	47.488	0.40091	47.479	47.227	47.628	-0.0093269					19	11	2	0	0	0	0.91977	1	3866	3866		45.952	7.1458	1	220690			56160	3892	37547	37562	63489	63489					0.01767730094900344
STVIAPAAGS	10	Unmodified	_STVIAPAAGS_					0	0	0			REV__ENSG00000124788|ENST00000436367|ATXN1	REV__ENSG00000124788|ENST00000436367|ATXN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.70904541015625	2	437.23745	872.460347	-0.49752	-0.00021754	1.8362	0.00080287	1.3387	0.00058533	437.23738292675364	84.855	0.5936	85.295	85.026	85.619	0.43967					19	14	2	0	0	0	0.37624	1	9935	9935		24.519	9.6543	1	91110	+		56161	18614	37548	37563	63490	63490					0.019015056264720442
STVKIVLP	8	Unmodified	_STVKIVLP_					0	0	0			REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.26153564453125	2	428.778754	855.542954	-1.14	-0.00048882	2.436	0.0010445	1.2959	0.00055566	428.77973252025083	90.914	0.25196	90.914	90.692	90.944	0					6	5	2	0	0	0	0.4196	1	8856	8856		16.473	0	1	34176	+		56162	15486	37549	37564	63491	63491					0.1094044742526421
STVKKEKS	8	Unmodified	_STVKKEKS_					0	0	0		ENST00000477401.5_1_7:14660999-14880939:-|nuORF;ENST00000403963.5_1_7:14249142-14880939:-|nuORF;nc|ENSG00000136267|Q9Y6T7-2|DGKB;chr7:14736194-14757655|34|32.74|0.77|5.41|-|ENST00000407950|DGKB,DGKB;ENSG00000136267|ENST00000402815|DGKB;nc|ENSG00000136267|Q9Y6T7|DGKB	ENST00000477401.5_1_7:14660999-14880939:-|nuORF	ENST00000477401.5_1_7:14660999-14880939:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.7654113769531	2	453.766374	905.518196	-0.68019	-0.00030865	-0.50473	-0.00022903	-1.1849	-0.00053768	453.76595867502624	41.947	1.3916	41.95	41.419	42.811	0.0034142					70	33	3	0	0	0	0.87479	1	3165	3165		30.504	3.7075	1	213660			56163	494	37550	37565	63492	63492					0.0616576755190863
STVLTSKY	8	Unmodified	_STVLTSKY_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.24853515625	2	449.74765	897.480748	0.17268	7.7663E-05	0.11581	5.2087E-05	0.2885	0.00012975	449.74756618958105	36.411	0.59432	36.514	36.253	36.847	0.10306					44	19	3	0	0	0	0.87792	1	2024	2024		31.53	1.6883	1	153600		+	56164	7934;579	37551	37566	63493	63493					0.027906762862812684
STVLTSKY	8	Unmodified	_STVLTSKY_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;CON__P01966	ENSG00000206172|ENST00000320868|HBA1;CON__P01966	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.7473449707031	2	449.74765	897.480748	0.054337	2.4438E-05	-0.33651	-0.00015134	-0.28217	-0.0001269	449.7475095697994	36.419	0.83972	36.359	35.934	36.774	-0.060333					39	24	2	0	0	0	0.90523	1	2013	2013		40.778	6.6056	1	134990		+	56165	7934;579	37551	37566	63494	63494					0.027906762862812684
STVRGFLE	8	Unmodified	_STVRGFLE_					0	0	0			REV__ENSG00000018699|ENST00000317907|TTC27	REV__ENSG00000018699|ENST00000317907|TTC27	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	454.74505615234375	2	454.745442	907.476331	0.75875	0.00034504	-1.8682	-0.00084954	-1.1094	-0.0005045	454.7444452036616	103.95	1.168	104.06	103.62	104.79	0.11684					52	28	3	0	0	0	0.89043	1	10999	10999		35.618	1.4457	1	321450	+		56166	16225	37552	37567	63495	63495					0.01889211863374385
STVSAKIK	8	Unmodified	_STVSAKIK_					0	0	0		ENST00000556068.5_1_14:102228230-102284455:+|nuORF;nc|ENSG00000078304|Q13362-4|PPP2R5C;ENSG00000078304|ENST00000694906|PPP2R5C	ENST00000556068.5_1_14:102228230-102284455:+|nuORF	ENST00000556068.5_1_14:102228230-102284455:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2576904296875	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.84191	1	1063	1063		11.511	2.6887	1	1763000			56167	1395	37553	37568	63496	63496					0.07886686385813846
STYAEVEPSG	10	Unmodified	_STYAEVEPSG_					0	0	0		ENSG00000161381|ENST00000315392|PLXDC1;ENST00000394318.7_1_17:37224095-37235479:-|nuORF;nc|ENSG00000161381|Q8IUK5-4|PLXDC1	ENSG00000161381|ENST00000315392|PLXDC1	ENSG00000161381|ENST00000315392|PLXDC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.31005859375	2	520.232561	1038.45057	-0.48498	-0.0002523	-2.6991	-0.0014042	-3.1841	-0.0016565	520.7329278230274	47.723	0.18896	48.192	48.119	48.308	0.46941					6	4	2	0	0	0	0.37624	1	4565	4565		27.882	0	1	59024			56168	5634	37554	37569	63497	63497					-0.06711727169545156
STYGVTKGK	9	Unmodified	_STYGVTKGK_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7579650878906	2	470.758549	939.502546	0.55179	0.00025976	-0.098609	-4.6421E-05	0.45318	0.00021334	470.7583144086137	18.745	0.44007	18.269	18.077	18.517	-0.47694					13	9	2	0	0	0	0.77244	1	435	435		32.812	6.0163	1	70063			56169	8635	37555	37570	63498	63498					0.03037481034857592
STYPAQNGQVK	11	Unmodified	_STYPAQNGQVK_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.8019409179688	2	596.801477	1191.5884	-0.38196	-0.00022795	-1.0908	-0.000651	-1.4728	-0.00087896	596.8002998226716	27.856	0.85773	27.759	27.403	28.261	-0.096947					49	19	4	0	0	0	0.22372	2	1631	1631;1643		78.264	35.868	1	699260			56170	1462	37556	37571	63499;63500	63499					0.0002702114970816183
STYPAQNGQVK	11	Unmodified	_STYPAQNGQVK_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.80078125	2	596.801477	1191.5884	0.95699	0.00057113	-2.4999	-0.0014919	-1.5429	-0.0009208	596.799365667397	27.931	1.062	27.676	27.325	28.387	-0.25465					49	25	4	0	0	0	0.33509	2	1666	1655;1666		65.465	24.039	1	630480			56171	1462	37556	37571	63501;63502	63502					0.0002702114970816183
SVAAKKFK	8	Unmodified	_SVAAKKFK_					0	0	0		nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8;ENSG00000198000|ENST00000442668|NOL8;ENST00000508336.1_1_4:166469096-166469723:-|nuORF	nc|ENSG00000198000|Q76FK4-2|NOL8	nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.2506408691406	2	439.776545	877.538538	1.6949	0.00074536	-1.33	-0.0005849	0.36486	0.00016046	439.7759149687007	19.778	0.3025	19.708	19.496	19.799	-0.070013					13	11	2	0	0	0	0.4196	1	443	443		19.36	0	1	26305			56172	8225	37557	37572	63503	63503					0.09486983002375382
SVAGAPIKK	9	Unmodified	_SVAGAPIKK_					0	0	0			REV__nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	REV__nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7740478515625	2	435.774003	869.533452	0.41932	0.00018273	-0.11313	-4.9301E-05	0.30618	0.00013343	435.77380782273434	18.483	0.60803	18.006	17.796	18.404	-0.47694					26	12	3	0	0	0	0.12652	1	402	402		87.754	0	1	396300	+		56173	17088	37558	37573	63504	63504					0.09346679139753178
SVAGAPIKK	9	Unmodified	_SVAGAPIKK_					0	0	0			REV__nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	REV__nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.7735595703125	2	435.774003	869.533452	0.45223	0.00019707	-0.23064	-0.00010051	0.22158	9.6559E-05	435.7737601327963	18.631	0.64186	18.009	17.767	18.409	-0.62141					29	14	3	0	0	0	0.15959	1	423	423		82.241	7.9855	1	392110	+		56174	17088	37558	37573	63505	63505					0.09346679139753178
SVAICKPLRY	10	Unmodified	_SVAICKPLRY_					0	0	0		ENSG00000280236|ENST00000642051|OR12D2	ENSG00000280236|ENST00000642051|OR12D2	ENSG00000280236|ENST00000642051|OR12D2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3260498046875	2	575.326076	1148.6376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.1	1	114.08	113.58	114.58	-0.024452								0	0	0	0.45132	1	12635	12635		32.812	0	1				56175	9049	37559	37574	63506	63506					0.06922637904949624
SVAIVIALP	9	Unmodified	_SVAIVIALP_					0	0	0		ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7879333496094	2	441.786579	881.558604	-1.4973	-0.00066148	4.3629	0.0019275	2.8656	0.001266	441.788391738542	44.7	2.6432	44.712	43.395	46.038	0.012058					134	65	3	0	0	0	0.7932	1	3206	3206		25.45	6.0902	1	555340			56176	4971	37560	37575	63507	63507					0.11308733942303206
SVAKPIQK	8	Unmodified	_SVAKPIQK_					0	0	0		ENSG00000117616|ENST00000243189|RSRP1;ENST00000566395.5_1_1:25569082-25570980:-|nuORF	ENSG00000117616|ENST00000243189|RSRP1	ENSG00000117616|ENST00000243189|RSRP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.7742919921875	2	435.774003	869.533452	0.41932	0.00018273	-0.11313	-4.9301E-05	0.30618	0.00013343	435.77380782273434	18.483	0.60803	18.006	17.796	18.404	-0.47694					26	12	3	0	0	0	0.38235	1	391	391		94.006	14.555	1	396300			56177	2991	37561	37576	63508	63508					0.09346679139764547
SVAKPIQK	8	Unmodified	_SVAKPIQK_					0	0	0		ENSG00000117616|ENST00000243189|RSRP1;ENST00000566395.5_1_1:25569082-25570980:-|nuORF	ENSG00000117616|ENST00000243189|RSRP1	ENSG00000117616|ENST00000243189|RSRP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.77386474609375	2	435.774003	869.533452	0.45223	0.00019707	-0.23064	-0.00010051	0.22158	9.6559E-05	435.7737601327963	18.631	0.64186	18.009	17.767	18.409	-0.62141					29	14	3	0	0	0	0.48059	1	415	415		76.774	15.802	1	392110			56178	2991	37561	37576	63509	63509					0.09346679139764547
SVAKTILKR	9	Unmodified	_SVAKTILKR_					0	0	0		ENST00000497054.5_1_2:74386211-74405801:-|nuORF;ENSG00000173542|ENST00000309395|MOB1B;ENSG00000114978|ENST00000396049|MOB1A;nc|ENSG00000173542|Q7L9L4-2|MOB1B	ENST00000497054.5_1_2:74386211-74405801:-|nuORF	ENST00000497054.5_1_2:74386211-74405801:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.33465576171875	2	508.334759	1014.65496	0.46172	0.00023471	-0.6929	-0.00035222	-0.23118	-0.00011752	508.33432123623874	25.009	1.1062	24.681	24.206	25.312	-0.32825					58	24	4	0	0	0	0.026116	5	1240	1231;1240;1252;1264;1279		120.87	59.896	1	1534500			56179	2803	37562	37577	63510;63511;63512;63513;63514	63511					0.14822301502283608
SVAKTILKR	9	Unmodified	_SVAKTILKR_					0	0	0		ENST00000497054.5_1_2:74386211-74405801:-|nuORF;ENSG00000173542|ENST00000309395|MOB1B;ENSG00000114978|ENST00000396049|MOB1A;nc|ENSG00000173542|Q7L9L4-2|MOB1B	ENST00000497054.5_1_2:74386211-74405801:-|nuORF	ENST00000497054.5_1_2:74386211-74405801:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.33447265625	2	508.334759	1014.65496	2.9327	0.0014908	-3.1476	-0.0016	-0.21488	-0.00010923	508.3330443411802	24.949	1.0999	24.436	23.968	25.068	-0.51365					59	24	4	0	0	0	0.026876	5	1255	1233;1243;1255;1266;1279		120.31	58.199	1	1300600			56180	2803	37562	37577	63515;63516;63517;63518;63519	63517					0.14822301502283608
SVALKSVKRMV	11	Unmodified	_SVALKSVKRMV_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.5839538574219	3	406.584797	1216.73256	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.26	1	112.29	111.79	112.79	0.028854								0	0	0	0.56276	1	12273	12273		28.577	0.93281	1		+		56181	18431	37563	37578	63520	63520					0.13286571376124812
SVAPTHCLDGP	11	Unmodified	_SVAPTHCLDGP_					0	0	0			REV__ENST00000391984.6_1_2:241526279-241528791:+|nuORF	REV__ENST00000391984.6_1_2:241526279-241528791:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.7567138671875	2	548.758223	1095.50189	-0.41385	-0.0002271	-2.4805	-0.0013612	-2.8944	-0.0015883	548.7566932590022	51.535	0.68855	51.533	51.307	51.996	-0.0020447					24	15	2	0	0	0	0.65746	1	4425	4425		37.812	0.65241	1	121930	+		56182	26011	37564	37579	63521	63521					-0.042036816764948526
SVAQLLLSK	9	Unmodified	_SVAQLLLSK_					0	0	0		ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A;ENST00000541335.1_1_12:431581-432275:-|nuORF	ENSG00000073614|ENST00000399788|KDM5A	ENSG00000073614|ENST00000399788|KDM5A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2757568359375	2	479.800217	957.585882	-0.16917	-8.1167E-05	0.29002	0.00013915	0.12085	5.7984E-05	479.800174305909	57.008	0.62935	57.405	57.029	57.658	0.39672					39	14	4	0	0	0	0.16545	1	5913	5913		101.46	11.09	1	988550			56183	1294	37565	37580	63522	63522					0.10539217482710228
SVAQLLLSK	9	Unmodified	_SVAQLLLSK_					0	0	0		ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A;ENST00000541335.1_1_12:431581-432275:-|nuORF	ENSG00000073614|ENST00000399788|KDM5A	ENSG00000073614|ENST00000399788|KDM5A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2756652832031	2	479.800217	957.585882	-0.20925	-0.0001004	0.37906	0.00018187	0.16981	8.1476E-05	479.80026350160074	56.878	0.71712	57.434	57.049	57.766	0.55512					36	16	3	0	0	0	0.20532	1	5910	5910		81.525	0	1	1004000			56184	1294	37565	37580	63523	63523					0.10539217482710228
SVAQVVLSR	9	Unmodified	_SVAQVVLSR_					0	0	0		nc|ENSG00000165272|Q92482-2|AQP3;ENST00000493581.1_1_9:33443725-33447528:-|nuORF;ENST00000463983.5_1_9:33443205-33447528:-|nuORF;ENSG00000165272|ENST00000297991|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.7870178222656	2	479.787641	957.56073	-0.040605	-1.9482E-05	-0.54973	-0.00026375	-0.59033	-0.00028323	479.78712503965806	44.718	0.6495	45.181	44.945	45.595	0.46313					31	15	3	0	0	0	0.21553	1	4126	4126		72.243	27.866	1	943760			56185	15067	37566	37581	63524	63524					0.08025162680144149
SVAQVVLSR	9	Unmodified	_SVAQVVLSR_					0	0	0		nc|ENSG00000165272|Q92482-2|AQP3;ENST00000493581.1_1_9:33443725-33447528:-|nuORF;ENST00000463983.5_1_9:33443205-33447528:-|nuORF;ENSG00000165272|ENST00000297991|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	479.787641	957.56073	-1.8451	-0.00088526	0.91352	0.0004383	-0.93159	-0.00044696	479.787987938699	44.468	0.68193	45.313	45.027	45.708	0.84437	0.065897	0.00037483	NaN	72.243	35	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	836470			56186	15067	37566	37581							0.08025162680144149
SVASAAAVLSH	11	Unmodified	_SVASAAAVLSH_					0	0	0		nc|ENSG00000118705|P04844-2|RPN2;ENSG00000118705|ENST00000237530|RPN2	nc|ENSG00000118705|P04844-2|RPN2	nc|ENSG00000118705|P04844-2|RPN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.7764587402344	2	506.774731	1011.53491	-0.80729	-0.00040911	0.24619	0.00012476	-0.5611	-0.00028435	506.7747120209961	46.116	0.56248	46.588	46.334	46.897	0.47139					27	13	3	0	0	0	1.2972E-08	2	4330	4330;4343		148.99	71.669	1	1142500			56187	3042	37567	37582	63525;63526	63525					0.029602684378460253
SVASAAAVLSH	11	Unmodified	_SVASAAAVLSH_					0	0	0		nc|ENSG00000118705|P04844-2|RPN2;ENSG00000118705|ENST00000237530|RPN2	nc|ENSG00000118705|P04844-2|RPN2	nc|ENSG00000118705|P04844-2|RPN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.775390625	2	506.774731	1011.53491	0.12542	6.3559E-05	-0.64636	-0.00032756	-0.52094	-0.000264	506.7742184940802	45.941	0.63765	46.837	46.567	47.205	0.89542					36	15	4	0	0	0	0.00036836	1	4313	4313		132.76	65.264	1	1130500			56188	3042	37567	37582	63527	63527					0.029602684378460253
SVASDVPEEL	10	Unmodified	_SVASDVPEEL_					0	0	0		nc|ENSG00000075292|Q14966-5|ZNF638;ENSG00000075292|ENST00000264447|ZNF638	nc|ENSG00000075292|Q14966-5|ZNF638	nc|ENSG00000075292|Q14966-5|ZNF638	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.2578735351562	2	523.256037	1044.49752	-0.33652	-0.00017608	-2.4129	-0.0012626	-2.7494	-0.0014387	523.2545590970301	43.459	1.0459	43.909	43.436	44.482	0.45025					62	25	3	0	0	0	0.4892	1	3923	3923		56.721	1.9447	1	951740			56189	1330	37568	37583	63528	63528					-0.022948676184114447
SVASDVPEEL	10	Unmodified	_SVASDVPEEL_					0	0	0		nc|ENSG00000075292|Q14966-5|ZNF638;ENSG00000075292|ENST00000264447|ZNF638	nc|ENSG00000075292|Q14966-5|ZNF638	nc|ENSG00000075292|Q14966-5|ZNF638	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.256591796875	2	523.256037	1044.49752	-1.646	-0.00086128	-0.75495	-0.00039503	-2.4009	-0.0012563	523.255438456418	43.262	1.1676	44.036	43.582	44.75	0.77379					57	28	3	0	0	0	0.37206	1	3904	3904		66.429	0	1	948310			56190	1330	37568	37583	63529	63529					-0.022948676184114447
SVAWFPLTLVF	11	Unmodified	_SVAWFPLTLVF_					0	0	0			REV__ENSG00000112486|ENST00000341935|CCR6	REV__ENSG00000112486|ENST00000341935|CCR6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3583374023438	2	640.357899	1278.70125	2.419	0.001549	-0.95147	-0.00060928	1.4675	0.00093973	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.6921	1	10739	10739		32.812	2.4947	1	625580	+		56191	17947	37569	37584	63530	63530					0.0730432161369663
SVCRGPVHL	9	Unmodified	_SVCRGPVHL_					0	0	0		nc|ENSG00000105479|Q96M63-5|ODAD1;ENST00000474199.5_1_19:48800699-48823634:-|nuORF	nc|ENSG00000105479|Q96M63-5|ODAD1	nc|ENSG00000105479|Q96M63-5|ODAD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.2579650878906	2	484.260736	966.50692	-1.1467	-0.0005553	-3.5537	-0.0017209	-4.7004	-0.0022762	484.25888424443	26.462	0.55018	26.43	26.147	26.697	-0.032127					26	11	3	0	0	0	0.51307	1	1127	1127		51.335	12.083	1	62652			56192	12300	37570	37585	63531	63531					0.022326669767835483
SVCYREGLGCC	11	Unmodified	_SVCYREGLGCC_					0	0	0		ENST00000395321.6_1_17:26901227-26901533:-|nuORF	ENST00000395321.6_1_17:26901227-26901533:-|nuORF	ENST00000395321.6_1_17:26901227-26901533:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	595.2430419921875	2	595.243569	1188.47258	0.56956	0.00033903	-2.6573	-0.0015817	-2.0877	-0.0012427	595.2418027090868	64.615	0.54326	64.739	64.494	65.038	0.12397					37	16	3	0	0	0	0.67778	1	5709	5709		35.152	0	1	303960			56193	11090	37571	37586	63532	63532					-0.11411285288636464
SVDGDRRMRS	10	Unmodified	_SVDGDRRMRS_					0	0	0			REV__ENST00000598055.1_1_19:41116760-41118026:+|nuORF	REV__ENST00000598055.1_1_19:41116760-41118026:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.786865234375	2	589.788378	1177.5622	-1.24	-0.00073135	0.68889	0.0004063	-0.55112	-0.00032505	589.7885714494649	30.542	0.673	30.531	30.244	30.917	-0.01099					38	17	4	0	0	0	0.4892	1	1598	1598		56.721	0.28726	1	151320	+		56194	29277	37572	37587	63533	63533					-0.019475712934081457
SVDLASTQRA	10	Unmodified	_SVDLASTQRA_					0	0	0		ENST00000474199.5_1_19:48800235-48800805:-|nuORF;ENST00000497273.1_1_19:48800235-48801266:-|nuORF;nc|ENSG00000105479|Q96M63-4|ODAD1;nc|ENSG00000105479|Q96M63|ODAD1;ENSG00000105479|ENST00000674294|ODAD1	ENST00000474199.5_1_19:48800235-48800805:-|nuORF	ENST00000474199.5_1_19:48800235-48800805:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2781982421875	2	524.275095	1046.53564	0.77594	0.00040681	2.6299	0.0013788	3.4058	0.0017856	524.2765116769002	25.659	3.3591	25.402	24.41	27.769	-0.25721					213	75	6	0	0	0	0.64457	1	1446	1446		47.657	1.6851	1	20447000			56195	2220	37573	37588	63534	63534					0.01423063086917864
SVDLECVKYC	10	Carbamidomethyl (C)	_SVDLEC(Carbamidomethyl (C))VKYC_	SVDLEC(1)VKYC		SVDLEC(39)VKYC(-39)		0	1	0		nc|ENSG00000127952|Q9Y6J8-5|STYXL1;nc|ENSG00000127952|Q9Y6J8-2|STYXL1;ENSG00000127952|ENST00000359697|STYXL1;nc|ENSG00000127952|Q9Y6J8-3|STYXL1	nc|ENSG00000127952|Q9Y6J8-5|STYXL1	nc|ENSG00000127952|Q9Y6J8-5|STYXL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.2738037109375	2	608.272849	1214.53115	-0.44302	-0.00026948	-0.15793	-9.6066E-05	-0.60096	-0.00036555	608.2726380221598	67.152	0.5586	67.168	66.965	67.524	0.016197					52	24	3	0	0	0	0.6116	1	6303	6303		49.442	10.189	2	127700			56196	3521	37574	37589	63535	63535	48				-0.06753905442542418
SVDPKNYPK	9	Unmodified	_SVDPKNYPK_					0	0	0		ENST00000491056.5_1_2:113587940-113590763:-|nuORF;ENSG00000125538|ENST00000263341|IL1B	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2770385742188	2	524.277106	1046.53966	0.77594	0.00040681	-1.2066	-0.0006326	-0.43068	-0.00022579	524.2765116769002	25.659	3.3591	25.402	24.41	27.769	-0.25721					213	75	6	0	0	0	0.012649	11	1360	1303;1312;1324;1336;1348;1360;1372;1385;1397;1422;1435		131.03	43.277	1	20447000			56197	3396	37575	37590	63536;63537;63538;63539;63540;63541;63542;63543;63544;63545;63546	63541					0.01825152580613576
SVDPKNYPK	9	Unmodified	_SVDPKNYPK_					0	0	0		ENST00000491056.5_1_2:113587940-113590763:-|nuORF;ENSG00000125538|ENST00000263341|IL1B	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2771606445312	2	524.277106	1046.53966	2.7827	0.0014589	-3.2687	-0.0017137	-0.48603	-0.00025482	524.2754281662812	25.682	3.5829	25.251	24.138	27.721	-0.4311					230	81	7	0	0	0	0.029359	9	1338	1315;1326;1338;1350;1362;1374;1386;1424;1436		118.74	33.254	1	23207000			56198	3396	37575	37590	63547;63548;63549;63550;63551;63552;63553;63554;63555	63549					0.01825152580613576
SVDPKNYPK	9	Unmodified	_SVDPKNYPK_					0	0	0		ENST00000491056.5_1_2:113587940-113590763:-|nuORF;ENSG00000125538|ENST00000263341|IL1B	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	524.277106	1046.53966	0.14226	7.4583E-05	-0.85613	-0.00044885	-0.71387	-0.00037427	524.2766755837819	25.167	0.46158	25.126	24.803	25.265	-0.04117	-0.030893	0.00163	NaN	131.03	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37071			56199	3396	37575	37590							0.01825152580613576
SVDPKNYPK	9	Unmodified	_SVDPKNYPK_					0	0	0		ENST00000491056.5_1_2:113587940-113590763:-|nuORF;ENSG00000125538|ENST00000263341|IL1B	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	524.277106	1046.53966	0.87457	0.00045852	-0.1243	-6.5168E-05	0.75027	0.00039335	524.2765943775482	25.053	0.50391	25.016	24.798	25.302	-0.037176	-0.14071	0.0023974	NaN	131.03	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30542			56200	3396	37575	37590							0.01825152580613576
SVDSGDEVIQ	10	Unmodified	_SVDSGDEVIQ_					0	0	0			REV__ENSG00000086570|ENST00000261800|FAT2	REV__ENSG00000086570|ENST00000261800|FAT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.7437744140625	2	524.743293	1047.47203	0.69249	0.00036338	0.53949	0.0002831	1.232	0.00064648	524.743544278018	24.742	0.77218	24.792	24.47	25.242	0.050451					35	23	2	0	0	0	0.51302	1	943	943		54.776	13.998	1	32886	+		56201	16912	37576	37591	63556	63556					-0.04980342140856919
SVEPLSMTLY	10	Unmodified	_SVEPLSMTLY_					0	0	0			REV__ENSG00000160796|ENST00000450053|NBEAL2	REV__ENSG00000160796|ENST00000450053|NBEAL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.2874145507812	2	570.286282	1138.55801	-0.31121	-0.00017748	-3.014	-0.0017188	-3.3252	-0.0018963	570.284523356633	81.315	0.72765	81.736	81.309	82.036	0.4215					42	17	3	0	0	0	0.5766	1	9347	9347		51.335	7.2187	1	364930	+		56202	20741	37577	37592	63557	63557					-0.005724735596686514
SVEPLSMTLY	10	Unmodified	_SVEPLSMTLY_					0	0	0			REV__ENSG00000160796|ENST00000450053|NBEAL2	REV__ENSG00000160796|ENST00000450053|NBEAL2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	570.286282	1138.55801	0.61368	0.00034997	-3.861	-0.0022018	-3.2473	-0.0018519	570.2841347489049	81.268	0.7328	81.767	81.339	82.072	0.49967	0.015627	-0.00036686	NaN	51.335	45	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	320570	+		56203	20741	37577	37592							-0.005724735596686514
SVFCGASRT	9	Unmodified	_SVFCGASRT_					0	0	0			REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2198181152344	2	464.221277	926.428001	-0.74181	-0.00034436	-3.1705	-0.0014718	-3.9123	-0.0018162	464.21943384777694	35.908	0.76984	35.852	35.385	36.155	-0.055901					33	16	3	0	0	0	0.41566	1	2354	2354		56.721	9.9546	1	142570	+		56204	24202	37578	37593	63558	63558					-0.038156050481802595
SVFCGASRT	9	Unmodified	_SVFCGASRT_					0	0	0			REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	464.221277	926.428001	-0.079537	-3.6923E-05	-2.9925	-0.0013892	-3.0721	-0.0014261	464.21962742556576	35.895	0.59426	35.88	35.514	36.108	-0.015583	0.13282	3.6838E-05	NaN	56.721	29	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87563	+		56205	24202	37578	37593							-0.038156050481802595
SVFCGASRT	9	Unmodified	_SVFCGASRT_					0	0	0			REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	464.221277	926.428001	-0.74181	-0.00034436	-3.1705	-0.0014718	-3.9123	-0.0018162	464.21943384777694	35.908	0.76984	35.852	35.385	36.155	-0.055901	0.1049	-0.00012835	NaN	56.721	33	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142570	+		56206	24202	37578	37593							-0.038156050481802595
SVFCGASRT	9	Unmodified	_SVFCGASRT_					0	0	0			REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	464.221277	926.428001	-1.1472	-0.00053257	-2.2229	-0.0010319	-3.3701	-0.0015645	464.22015022675004	35.716	0.61093	35.747	35.542	36.153	0.031132	8.9612E-05	0.0007514	NaN	56.721	18	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48066	+		56207	24202	37578	37593							-0.038156050481802595
SVFCGASRT	9	Unmodified	_SVFCGASRT_					0	0	0			REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	464.221277	926.428001	0.18014	8.3625E-05	-3.5387	-0.0016427	-3.3585	-0.0015591	464.21953774342	35.572	0.44225	35.678	35.439	35.881	0.10604	-0.069084	-0.00047022	NaN	56.721	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84434	+		56208	24202	37578	37593							-0.038156050481802595
SVFCGASRT	9	Unmodified	_SVFCGASRT_					0	0	0			REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	464.221277	926.428001	0.12854	5.9671E-05	-3.8126	-0.0017699	-3.6841	-0.0017102	464.21941289339674	35.702	0.44088	35.642	35.455	35.896	-0.060333	-0.10558	-0.00072458	NaN	56.721	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77785	+		56209	24202	37578	37593							-0.038156050481802595
SVFCGASRT	9	Unmodified	_SVFCGASRT_					0	0	0			REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	REV__ENST00000233121.6_1_2:27249234-27249549:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	464.221277	926.428001	1.1148	0.00051752	-4.4486	-0.0020651	-3.3338	-0.0015476	464.21898732241397	35.176	0.34462	35.557	35.404	35.749	0.3812	-0.18988	-0.001315	NaN	56.721	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93669	+		56210	24202	37578	37593							-0.038156050481802595
SVFILAKPTGT	11	Unmodified	_SVFILAKPTGT_					0	0	0			REV__nc|ENSG00000074416|Q99685-2|MGLL	REV__nc|ENSG00000074416|Q99685-2|MGLL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297119140625	2	567.331882	1132.64921	-0.54401	-0.00030863	-2.6363	-0.0014957	-3.1803	-0.0018043	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.70737	1	8821	8821		30.318	1.1682	1	4477200	+		56211	16690	37579	37594	63559	63559					0.08819158199935373
SVFKSARQK	9	Unmodified	_SVFKSARQK_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.8078002929688	2	525.806365	1049.59818	1.1236	0.00059082	-0.99408	-0.0005227	0.12956	6.8124E-05	525.8056699981385	18.297	0.37172	17.82	17.611	17.983	-0.47694					19	7	3	0	0	0	0.21969	1	365	365		71.877	9.7701	1	331790			56212	1442	37580	37595	63560	63560					0.07536253945750104
SVFQITSVLAL	11	Unmodified	_SVFQITSVLAL_					0	0	0			REV__ENST00000572819.6_1_17:1939773-1940251:+|nuORF	REV__ENST00000572819.6_1_17:1939773-1940251:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3429565429688	2	589.344989	1176.67542	-0.36759	-0.00021664	-3.0824	-0.0018166	-3.45	-0.0020332	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.72106	1	9334	9334		28.081	0	1	11103000	+		56213	17741	37581	37596	63561	63561					0.09415427371436635
SVFTISMY	8	Unmodified	_SVFTISMY_					0	0	0		ENST00000490276.5_1_1:155108359-155110646:+|nuORF;nc|ENSG00000169241|Q9BRV3-2|SLC50A1;ENSG00000169241|ENST00000368404|SLC50A1	ENST00000490276.5_1_1:155108359-155110646:+|nuORF	ENST00000490276.5_1_1:155108359-155110646:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	474.23248291015625	2	474.230779	946.447005	0.18958	8.9905E-05	3.2785	0.0015548	3.4681	0.0016447	474.2322245815835	39.967	0.8533	39.936	39.522	40.376	-0.03027					44	20	3	0	0	0	0.84634	1	2813	2813		60.294	3.5729	1	388680			56214	6479	37582	37597	63562	63562					-0.02836068477131448
SVGAMGGG	8	Unmodified	_SVGAMGGG_					0	0	0		ENSG00000105723|ENST00000222330|GSK3A	ENSG00000105723|ENST00000222330|GSK3A	ENSG00000105723|ENST00000222330|GSK3A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3767700195312	1	635.281737	634.27446	-1.1747	-0.00074625	3.5399	0.0022488	2.3652	0.0015026	635.2846538931493	111.36	0.080406	111.34	111.28	111.36	-0.019882					4	2	2	0	0	0	0.4196	1	11870	11870		20.482	5.8177	1	1261600			56215	2247	37583	37598	63563	63563					-0.057305950938143724
SVGFPWLW	8	Unmodified	_SVGFPWLW_					0	0	0			REV__ENST00000336617.7_1_13:51530690-51530858:+|nuORF	REV__ENST00000336617.7_1_13:51530690-51530858:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25982666015625	2	496.255446	990.496338	0.068268	3.3878E-05	0.92888	0.00046096	0.99715	0.00049484	496.25510006920064	35.479	0.26403	35.727	35.669	35.933	0.24769					9	6	2	0	0	0	0.4196	1	2727	2727		14.664	3.1531	1	77152	+		56216	25195	37584	37599	63564	63564					0.0007100759397644651
SVGGLDKID	9	Unmodified	_SVGGLDKID_					0	0	0			REV__ENST00000495067.1_1_7:87505864-87507564:+|nuORF	REV__ENST00000495067.1_1_7:87505864-87507564:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9432067871094	2	452.242732	902.470912	-0.55412	-0.0002506	0.46587	0.00021069	-0.088247	-3.9909E-05	452.242868029267	53.771	0.53381	53.709	53.399	53.933	-0.062065					19	12	2	0	0	0	0.20789	1	4389	4389		26.693	10.22	1	146590	+		56217	27728	37585	37600	63565	63565					0.0157748828091826
SVGHIRKH	8	Unmodified	_SVGHIRKH_					0	0	0			REV__chr2:101002808-101004168|20|27.1|0.46|5.88|+|1|RPL31,None|1	REV__chr2:101002808-101004168|20|27.1|0.46|5.88|+|1|RPL31,None|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.8077087402344	2	467.272493	932.530432	0.30064	0.00014048	-3.1558	-0.0014746	-2.8552	-0.0013341	467.2707491653219	31.189	0.144	31.187	31.057	31.201	-0.0022545					9	6	2	0	0	0	0.4196	1	1407	1407		24.203	4.8428	1	36000	+		56218	15730	37586	37601	63566	63566					0.06146848805610716
SVGIVSFV	8	Unmodified	_SVGIVSFV_					0	0	0		ENST00000301785.5_1_11:62481247-62481610:-|nuORF	ENST00000301785.5_1_11:62481247-62481610:-|nuORF	ENST00000301785.5_1_11:62481247-62481610:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5744323730469	2	404.234179	806.453805	-1.8255	-0.00073793	-1.9352	-0.00078229	-3.7608	-0.0015202	404.2331816365792	82.181	2.6445	82.336	80.406	83.051	0.15473					109	63	3	0	0	0	0.4196	1	7929	7929		25.45	4.9683	1	419330			56219	9811	37587	37602	63567	63567					0.04283612465769693
SVGKPRFF	8	Unmodified	_SVGKPRFF_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.2633972167969	2	469.266345	936.518136	-1.0919	-0.0005124	-2.8703	-0.0013469	-3.9622	-0.0018593	469.2648658917753	24.934	0.60255	24.992	24.746	25.348	0.058167					44	27	2	0	0	0	0.9159	1	891	891		44.531	10.359	1	114340	+		56220	23147	37588	37603	63568	63568					0.047338123425674894
SVGKPRFF	8	Unmodified	_SVGKPRFF_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	469.266345	936.518136	-1.0919	-0.0005124	-2.8703	-0.0013469	-3.9622	-0.0018593	469.2648658917753	24.934	0.60255	24.992	24.746	25.348	0.058167	0.1771	0.00093501	NaN	44.531	44	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114340	+		56221	23147	37588	37603							0.047338123425674894
SVGKPRFF	8	Unmodified	_SVGKPRFF_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	469.266345	936.518136	0.086005	4.0359E-05	-4.3352	-0.0020344	-4.2492	-0.001994	469.26421500021445	24.586	0.49895	24.686	24.445	24.944	0.10045	-0.12876	-0.00043984	NaN	44.531	40	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125560	+		56222	23147	37588	37603							0.047338123425674894
SVGKPRFF	8	Unmodified	_SVGKPRFF_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	469.266345	936.518136	0.53503	0.00025107	-4.5163	-0.0021194	-3.9813	-0.0018683	469.26402931234855	24.753	0.48578	24.767	24.553	25.038	0.013996	-0.048333	-0.00060985	NaN	44.531	39	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134440	+		56223	23147	37588	37603							0.047338123425674894
SVGLVSVSK	9	Unmodified	_SVGLVSVSK_					0	0	0		ENSG00000124003|ENST00000446656|MOGAT1	ENSG00000124003|ENST00000446656|MOGAT1	ENSG00000124003|ENST00000446656|MOGAT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2672424316406	2	438.263468	874.512382	-0.26243	-0.00011501	0.59264	0.00025973	0.33021	0.00014472	438.26374056449146	51.525	0.83792	51.96	51.534	52.372	0.43505					27	19	2	0	0	0	0.20789	1	5096	5096		14.865	0	1	179220			56224	3298	37589	37604	63569	63569					0.07010669040244011
SVGMAGLVA	9	Unmodified	_SVGMAGLVA_					0	0	0		chr1:23338608-23345201|13|20.69|0.1|7.73|-|2|HNRNPR,None|1	chr1:23338608-23345201|13|20.69|0.1|7.73|-|2|HNRNPR,None|1	chr1:23338608-23345201|13|20.69|0.1|7.73|-|2|HNRNPR,None|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2468566894531	2	402.717839	803.421125	-1.7908	-0.0007212	-0.5083	-0.0002047	-2.2991	-0.0009259	402.7173988890249	104.39	0.54433	104.57	104.34	104.89	0.17096					19	13	2	0	0	0	0.20789	1	11089	11089		6.7355	2.7503	1	77929			56225	42	37590	37605	63570	63570					0.011550820712500354
SVGPARPPV	9	Unmodified	_SVGPARPPV_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.2554931640625	2	440.255977	878.497401	-1.5773	-0.00069443	0.16411	7.2252E-05	-1.4132	-0.00062218	440.2558864643056	60.863	0.38903	60.863	60.685	61.074	0					27	17	2	0	0	0	0.7932	1	5346	5346		25.574	2.5316	1	64382	+		56226	17426	37591	37606	63571	63571					0.05329221962904285
SVGPARPPV	9	Unmodified	_SVGPARPPV_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	440.255977	878.497401	-0.1586	-6.9825E-05	-1.2729	-0.00056039	-1.4315	-0.00063022	440.25526830896376	60.984	0.38404	60.972	60.79	61.174	-0.012203	0.1279	-0.00094753	NaN	25.574	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115980	+		56227	17426	37591	37606							0.05329221962904285
SVGPARPPV	9	Unmodified	_SVGPARPPV_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	440.255977	878.497401	-1.4995	-0.00066014	-0.016865	-7.4251E-06	-1.5163	-0.00066757	440.2559096543124	60.596	0.55002	60.697	60.508	61.058	0.10082	-0.14719	0.00015841	NaN	25.574	39	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	235130	+		56228	17426	37591	37606							0.05329221962904285
SVGRGHLN	8	Unmodified	_SVGRGHLN_					0	0	0		chr6:158168395-158170480|21|70.95|0.17|8.72|+|2|GTF2H5,None|1	chr6:158168395-158170480|21|70.95|0.17|8.72|+|2|GTF2H5,None|1	chr6:158168395-158170480|21|70.95|0.17|8.72|+|2|GTF2H5,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2272033691406	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.87922	1	7968	7968		31.955	3.7006	1	743780			56229	472	37592	37607	63572	63572					0.015265941262327942
SVGSAWPLSL	10	Unmodified	_SVGSAWPLSL_					0	0	0			REV__ENST00000530235.1_1_11:66406260-66406308:+|nuORF	REV__ENST00000530235.1_1_11:66406260-66406308:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.771240234375	2	508.7742	1015.53385	0.077994	3.9681E-05	-4.2262	-0.0021502	-4.1482	-0.0021105	508.7720010142823	49.67	0.73777	50.13	49.789	50.527	0.45983					39	17	3	0	0	0	0.37206	1	4868	4868		66.429	15.094	1	1760400	+		56230	28280	37593	37608	63573	63573					0.02670054068948957
SVGSVTQPE	9	Unmodified	_SVGSVTQPE_					0	0	0		ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3	ENSG00000163625|ENST00000295888|WDFY3	ENSG00000163625|ENST00000295888|WDFY3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.228759765625	2	452.224539	902.434526	4.5148	0.0020417	1.6899	0.0007642	6.2046	0.0028059	452.2261030001731	107	0.85062	107.15	106.81	107.66	0.14929					69	29	5	0	0	0	0.78528	1	13120	13120		29.17	0.91578	1	2327200			56231	5839	37594	37609	63574	63574					-0.020593886157939778
SVGVKVSAS	9	Unmodified	_SVGVKVSAS_					0	0	0		ENST00000545225.5_2_17:40994478-40994634:+|nuORF	ENST00000545225.5_2_17:40994478-40994634:+|nuORF	ENST00000545225.5_2_17:40994478-40994634:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2403869628906	2	417.239993	832.465432	0.6222	0.00025961	-1.5968	-0.00066624	-0.97458	-0.00040663	417.23868874141215	88.354	2.9102	88.504	86.614	89.525	0.15055					153	68	4	0	0	0	0.7932	1	8747	8747		23.523	2.5758	1	1138800			56232	13577	37595	37610	63575	63575					0.04249809489101608
SVGVRNLH	8	Unmodified	_SVGVRNLH_					0	0	0			REV__nc|ENSG00000011451|O95785|WIZ	REV__nc|ENSG00000011451|O95785|WIZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.2496337890625	2	441.251226	880.487899	0.32417	0.00014304	-2.7866	-0.0012296	-2.4624	-0.0010865	441.24991412668464	48.695	0.51625	49.599	49.33	49.846	0.90424					32	12	4	0	0	0	0.60357	1	4726	4726		71.296	10.324	1	839260	+		56233	16186	37596	37611	63576	63576					0.04287453677363828
SVGVRNLH	8	Unmodified	_SVGVRNLH_					0	0	0			REV__nc|ENSG00000011451|O95785|WIZ	REV__nc|ENSG00000011451|O95785|WIZ	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	441.251226	880.487899	-1.7439	-0.00076952	-5.7191	-0.0025235	-7.463	-0.0032931	441.24838831125817	49.401	0.39075	49.401	49.27	49.66	0	-0.037232	-0.0031318	NaN	71.296	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47187	+		56234	16186	37596	37611							0.04287453677363828
SVGVRNLH	8	Unmodified	_SVGVRNLH_					0	0	0			REV__nc|ENSG00000011451|O95785|WIZ	REV__nc|ENSG00000011451|O95785|WIZ	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	441.251226	880.487899	0.32417	0.00014304	-2.7866	-0.0012296	-2.4624	-0.0010865	441.24991412668464	48.695	0.51625	49.599	49.33	49.846	0.90424	0.16052	-0.00054385	NaN	71.296	32	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	839260	+		56235	16186	37596	37611							0.04287453677363828
SVHDASDIL	9	Unmodified	_SVHDASDIL_					0	0	0		ENST00000305366.7_1_3:149095174-149095441:-|nuORF	ENST00000305366.7_1_3:149095174-149095441:-|nuORF	ENST00000305366.7_1_3:149095174-149095441:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2777404785156	2	478.737814	955.461075	-0.78084	-0.00037382	-0.91973	-0.00044031	-1.7006	-0.00081413	478.73680366812755	81.844	0.5502	82.344	82.188	82.738	0.49966					19	13	2	0	0	0	0.20789	1	9517	9517		37.159	1.9584	1	124370			56236	9848	37597	37612	63577	63577					-0.018436997244748454
SVHPTGATAQT	11	Unmodified	_SVHPTGATAQT_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2677001953125	2	535.26727	1068.51999	0.30503	0.00016327	1.2618	0.00067539	1.5668	0.00083867	535.2678902855296	25.638	0.63939	25.381	25.043	25.682	-0.2572					35	14	3	0	0	0	0.33509	1	1339	1339		65.465	4.4934	1	367200	+		56237	18287	37598	37613	63578	63578					-0.01153223430151229
SVHPTGATAQT	11	Unmodified	_SVHPTGATAQT_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2672729492188	2	535.26727	1068.51999	2.3766	0.0012721	-0.85361	-0.00045691	1.523	0.00081521	535.2667942353804	25.666	0.80199	25.235	24.895	25.697	-0.4311					44	18	4	0	0	0	0.41466	1	1364	1364		58.23	0	1	495420	+		56238	18287	37598	37613	63579	63579					-0.01153223430151229
SVHSRCST	8	Unmodified	_SVHSRCST_					0	0	0		ENST00000457422.6_1_17:42755337-42755409:-|nuORF	ENST00000457422.6_1_17:42755337-42755409:-|nuORF	ENST00000457422.6_1_17:42755337-42755409:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.70147705078125	2	438.703251	875.39195	0.44448	0.000195	-0.17248	-7.567E-05	0.272	0.00011933	438.70154141228227	26.442	1.5718	26.487	26.257	27.829	0.045507					60	48	2	0	0	0	0.90465	1	1125	1125		40.573	0	1	44245			56239	11981	37599	37614	63580	63580					-0.050730622250284796
SVIDQLSRTH	10	Unmodified	_SVIDQLSRTH_					0	0	0		nc|ENSG00000066933|B2RTY4-5|MYO9A;nc|ENSG00000066933|B2RTY4-2|MYO9A;ENSG00000066933|ENST00000356056|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A	nc|ENSG00000066933|B2RTY4-5|MYO9A	nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	578.3096923828125	2	578.309469	1154.60439	0.66204	0.00038287	1.3221	0.00076457	1.9841	0.0011474	578.3100530437905	110.07	1.6087	110.19	110.03	111.64	0.11946					88	58	4	0	0	0	0.8608	1	11876	11876		34.173	3.6689	1	2568100			56240	1172	37600	37615	63581	63581					0.033267273866158575
SVIGSVHTW	9	Unmodified	_SVIGSVHTW_					0	0	0		ENST00000469694.5_1_2:241404001-241405704:+|nuORF;ENSG00000063660|ENST00000264039|GPC1	ENST00000469694.5_1_2:241404001-241405704:+|nuORF	ENST00000469694.5_1_2:241404001-241405704:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.2590026855469	2	493.258717	984.50288	-1.4588	-0.00071956	1.4534	0.00071692	-0.0053517	-2.6398E-06	493.2595285153511	54.743	0.5271	54.743	54.471	54.998	0					42	21	3	0	0	0	0.51307	1	4596	4596		51.335	3.4199	1	233990			56241	1093	37601	37616	63582	63582					0.010009007546955218
SVIKGYKS	8	Unmodified	_SVIKGYKS_					0	0	0			REV__ENST00000528764.1_1_11:86735664-86735814:+|nuORF	REV__ENST00000528764.1_1_11:86735664-86735814:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.78729248046875	2	441.258185	880.501818	-1.1742	-0.00051813	-0.23946	-0.00010567	-1.4137	-0.00062379	441.25794040381817	40.018	0.53157	40.607	40.303	40.835	0.58915					16	12	2	0	0	0	0.4196	1	3387	3387		23.042	4.7181	1	82782	+		56242	28255	37602	37617	63583	63583					0.05678686385806486
SVIKKQPLP	9	Unmodified	_SVIKKQPLP_					0	0	0			REV__ENSG00000275342|ENST00000615670|PRAG1	REV__ENSG00000275342|ENST00000615670|PRAG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.3235168457031	2	505.32386	1008.63317	-0.455	-0.00022992	0.3436	0.00017363	-0.1114	-5.6295E-05	505.32388066483486	80.737	0.95578	80.874	80.482	81.437	0.13702					61	22	4	0	0	0	0.78058	1	7716	7716		30.504	0	1	769050	+		56243	24010	37603	37618	63584	63584					0.12919496753693238
SVILFQIKR	9	Unmodified	_SVILFQIKR_					0	0	0		ENST00000412976.1_1_10:65930205-65930388:-|nuORF	ENST00000412976.1_1_10:65930205-65930388:-|nuORF	ENST00000412976.1_1_10:65930205-65930388:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8511352539062	2	552.350409	1102.68626	-0.44202	-0.00024415	-0.63322	-0.00034976	-1.0752	-0.00059391	552.8512329099864	109.37	0.13609	109.37	109.31	109.45	0					9	6	2	0	0	0	0.7932	1	11366	11366		23.042	0	1	1126500			56244	11345	37604	37619	63585	63585					0.13902874536347554
SVILISYLLI	10	Unmodified	_SVILISYLLI_					0	0	0		ENSG00000172377|ENST00000641439|OR9I1	ENSG00000172377|ENST00000641439|OR9I1	ENSG00000172377|ENST00000641439|OR9I1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3627319335938	2	567.36265	1132.71075	-0.82344	-0.00046719	2.4008	0.0013621	1.5773	0.00089493	567.3638410249442	44.579	2.1787	44.545	43.955	46.134	-0.03347					156	50	5	0	0	0	0.85694	1	3650	3650		21.96	4.5949	1	2613600			56245	6768	37605	37620	63586	63586					0.1497008989922506
SVILKSNH	8	Unmodified	_SVILKSNH_					0	0	0		ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.26177978515625	2	449.261259	896.507966	0.91517	0.00041115	-2.8818	-0.0012947	-1.9666	-0.00088351	449.25967482037305	100.46	1.0769	100.76	100.3	101.37	0.2999					49	26	2	0	0	0	0.67263	1	12170	12170		68.485	5.5063	1	439050			56246	7452	37606	37621	63587	63587					0.055572046173210765
SVILKSNH	8	Unmodified	_SVILKSNH_					0	0	0		ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2607116699219	2	449.261259	896.507966	0.037787	1.6976E-05	-1.6093	-0.00072298	-1.5715	-0.000706	449.260464463793	72.138	1.197	72.688	72.279	73.476	0.55008					69	28	4	0	0	0	0.89043	1	8090	8090		35.618	3.6634	1	1304500			56247	7452	37606	37621	63588	63588					0.055572046173210765
SVIQITRSL	9	Unmodified	_SVIQITRSL_					0	0	0			REV__ENST00000453386.6_1_3:185635026-185635125:-|nuORF	REV__ENST00000453386.6_1_3:185635026-185635125:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8077392578125	2	508.808574	1015.60259	-0.31062	-0.00015805	-0.84428	-0.00042958	-1.1549	-0.00058762	508.80800447474485	82.779	1.2447	83.21	82.754	83.998	0.43108					73	29	4	0	0	0	0.76764	1	9617	9617		34.173	0	1	3073800	+		56248	26909	37607	37622	63589	63589					0.09541718368643615
SVKADRLWK	9	Unmodified	_SVKADRLWK_					0	0	0		ENST00000503007.5_1_5:79364367-79378199:-|nuORF	ENST00000503007.5_1_5:79364367-79378199:-|nuORF	ENST00000503007.5_1_5:79364367-79378199:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	551.8223876953125	2	551.822015	1101.62948	0.3046	0.00016809	-0.835	-0.00046077	-0.5304	-0.00029268	551.8213667161781	39.925	0.65953	40.01	39.648	40.308	0.084461					32	16	3	0	0	0	0.64922	1	2494	2494		44.117	1.7207	1	372680			56249	12874	37608	37623	63590	63590					0.08272826979828096
SVKCSRPDLY	10	Unmodified	_SVKCSRPDLY_					0	0	0			REV__nc|ENSG00000119682|O15033-2|AREL1	REV__nc|ENSG00000119682|O15033-2|AREL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.2972412109375	2	584.294973	1166.57539	-0.34411	-0.00020106	3.2654	0.0019079	2.9213	0.0017069	584.2988622760629	76.093	0.68468	76.662	76.392	77.077	0.56836					56	17	5	0	0	0	0.66675	1	8674	8674		46.457	4.0606	1	747270	+		56250	18368	37609	37624	63591	63591					-0.0012313323402395326
SVKEGTPP	8	Unmodified	_SVKEGTPP_					0	0	0			REV__ENSG00000186472|ENST00000333891|PCLO	REV__ENSG00000186472|ENST00000333891|PCLO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.7206115722656	2	407.718893	813.423233	2.6827	0.0010938	1.362	0.00055532	4.0447	0.0016491	407.7196256873708	102.15	0.80925	102.41	102.07	102.88	0.26322					65	19	4	0	0	0	0.90983	1	12409	12409		42.396	5.237	1	5496600	+		56251	22856	37610	37625	63592	63592					0.009058340807087006
SVKKLYHN	8	Unmodified	_SVKKLYHN_					0	0	0		ENST00000205636.3_1_3:32533293-32544161:-|nuORF	ENST00000205636.3_1_3:32533293-32544161:-|nuORF	ENST00000205636.3_1_3:32533293-32544161:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7799377441406	2	494.782359	987.550165	-0.075057	-3.7137E-05	-4.2464	-0.002101	-4.3214	-0.0021382	494.7801083626478	84.098	2.6315	84.165	82.573	85.204	0.067001					119	60	3	0	0	0	0.88601	1	8383	8383		34.173	4.331	1	230560			56252	9105	37611	37626	63593	63593					0.055891800256858915
SVKLSVSTT	9	Unmodified	_SVKLSVSTT_					0	0	0		nc|ENSG00000142197|Q9Y3R5-2|DOP1B;ENSG00000142197|ENST00000691173|DOP1B	nc|ENSG00000142197|Q9Y3R5-2|DOP1B	nc|ENSG00000142197|Q9Y3R5-2|DOP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	461.2649230957031	2	461.266207	920.517862	-0.1247	-5.752E-05	-2.2646	-0.0010446	-2.3893	-0.0011021	461.2649815864835	93.17	1.5107	93.239	92.756	94.266	0.06987					100	35	4	0	0	0	0.7932	1	9672	9672		25.574	1.3713	1	1215800			56253	4548	37612	37627	63594	63594					0.054423478320472896
SVKQCLLAI	9	Unmodified	_SVKQCLLAI_					0	0	0		ENSG00000110876|ENST00000550948|SELPLG;nc|ENSG00000110876|Q14242-2|SELPLG	ENSG00000110876|ENST00000550948|SELPLG	ENSG00000110876|ENST00000550948|SELPLG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7901306152344	2	487.788795	973.563038	0.6235	0.00030414	2.5998	0.0012681	3.2233	0.0015723	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.77696	1	7819	7819		31.53	1.0262	1	479320			56254	2547	37613	37628	63595	63595					0.07519875093566952
SVKQIRFRF	9	Unmodified	_SVKQIRFRF_					0	0	0		ENSG00000177688|ENST00000326669|SUMO4	ENSG00000177688|ENST00000326669|SUMO4	ENSG00000177688|ENST00000326669|SUMO4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	590.7044067382812	2	590.851107	1179.68766	0.21324	0.000126	-2.9671	-0.0017531	-2.7539	-0.0016271	590.8475594988083	25.58	0.074238	25.685	25.637	25.712	0.1054					5	3	2	0	0	0	0.20789	1	931	931		23.042	0	1	24836			56255	7156	37614	37629	63596	63596					0.1050050862511398
SVKVHKKLMK	10	Unmodified	_SVKVHKKLMK_					0	0	0			REV__ENSG00000231192|ENST00000641874|OR5H1	REV__ENSG00000231192|ENST00000641874|OR5H1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.379638671875	2	599.378643	1196.74273	3.2712	0.0019607	-1.0027	-0.00060099	2.2685	0.0013597	599.3778849492661	103.51	3.7036	103.46	103.04	106.74	-0.043755					239	88	5	0	0	0	0.86718	1	11325	11325		27.882	0	1	11967000	+		56256	23760	37615	37630	63597	63597					0.1522317910134916
SVKVHKKLMK	10	Unmodified	_SVKVHKKLMK_					0	0	0			REV__ENSG00000231192|ENST00000641874|OR5H1	REV__ENSG00000231192|ENST00000641874|OR5H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3795166015625	2	599.378643	1196.74273	0.89993	0.0005394	1.557	0.00093323	2.4569	0.0014726	599.379410135585	103.38	3.1227	103.51	103.01	106.14	0.12621					246	78	5	0	0	0	0.86718	1	11004	11004		27.882	0	1	20012000	+		56257	23760	37615	37630	63598	63598					0.1522317910134916
SVKWLRRGKS	10	Unmodified	_SVKWLRRGKS_					0	0	0			REV__ENST00000326035.6_1_5:43280652-43280736:+|nuORF	REV__ENST00000326035.6_1_5:43280652-43280736:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24951171875	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.63	1	112.6	112.1	113.1	-0.025414								0	0	0	0.45132	1	12449	12449		19.263	1.4295	1		+		56258	25072	37616	37631	63599	63599					0.12079296028127828
SVLARPRG	8	Unmodified	_SVLARPRG_					0	0	0		ENST00000426198.5_1_7:43965898-43966009:-|nuORF	ENST00000426198.5_1_7:43965898-43966009:-|nuORF	ENST00000426198.5_1_7:43965898-43966009:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2615661621094	2	428.261594	854.508634	-1.8497	-0.00079216	1.9562	0.00083775	0.10645	4.5588E-05	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.8347	1	9057	9057		23.042	1.3402	1	31323000			56259	11547	37617	37632	63600	63600					0.0755604405703707
SVLGKMFLKKG	11	Unmodified	_SVLGKMFLKKG_					0	0	0		HAL1_dup8047|chr5:141204792-141205435:-|1.0571548878225394|0.1035032541792388|3.35|63.0|7|1|sense	HAL1_dup8047|chr5:141204792-141205435:-|1.0571548878225394|0.1035032541792388|3.35|63.0|7|1|sense	HAL1_dup8047|chr5:141204792-141205435:-|1.0571548878225394|0.1035032541792388|3.35|63.0|7|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.24725341796875	3	403.245893	1206.71585	2.718	0.001096	-0.28346	-0.00011431	2.4345	0.00098171	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.74763	1	11754	11754		15.337	0	1	15597000			56260	14498	37618	37633	63601	63601					0.12076070490184065
SVLGPHEAVL	10	Unmodified	_SVLGPHEAVL_					0	0	0			REV__ENSG00000158516|ENST00000222481|CPA2	REV__ENSG00000158516|ENST00000222481|CPA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.28662109375	2	511.287474	1020.5604	-0.43839	-0.00022414	-0.24891	-0.00012726	-0.68729	-0.0003514	511.2870812500734	41.969	0.73903	41.973	41.619	42.358	0.0043983					43	18	3	0	0	0	0.4892	1	2790	2790		56.721	0	1	753980	+		56261	20611	37619	37634	63602	63602					0.05093742960275449
SVLGVVFGKGN	11	Unmodified	_SVLGVVFGKGN_					0	0	0		ENST00000525065.1_1_11:117062460-117063438:+|nuORF;ENST00000529484.5_1_11:117061404-117064733:+|nuORF;ENSG00000149577|ENST00000324225|SIDT2;nc|ENSG00000149577|Q8NBJ9-2|SIDT2	ENST00000525065.1_1_11:117062460-117063438:+|nuORF	ENST00000525065.1_1_11:117062460-117063438:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.3068237304688	2	538.808574	1075.60259	0.74987	0.00040403	-4.2313	-0.0022799	-3.4814	-0.0018758	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.64498	1	9155	9155		39.253	5.7372	1	840570			56262	5038	37620	37635	63603	63603					0.06781718368665679
SVLIIITHPKL	11	Unmodified	_SVLIIITHPKL_					0	0	0		ENSG00000127364|ENST00000247881|TAS2R4	ENSG00000127364|ENST00000247881|TAS2R4	ENSG00000127364|ENST00000247881|TAS2R4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	617.400390625	2	617.400099	1232.78564	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.001	1	23.003	22.503	23.503	0.0018959								0	0	0	0.56276	1	707	707		14.137	1.9304	1				56263	3493	37621	37636	63604	63604					0.17856272430458375
SVLITTLDL	9	Unmodified	_SVLITTLDL_					0	0	0			REV__ENSG00000220008|ENST00000698372|LINGO3	REV__ENSG00000220008|ENST00000698372|LINGO3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7911682128906	2	487.792058	973.569563	0.54992	0.00026825	-3.6734	-0.0017919	-3.1235	-0.0015236	487.7902484870491	82.289	2.8429	82.226	80.531	83.374	-0.062935					186	66	4	0	0	0	0.74721	1	8239	8239		37.159	6.6555	1	633420	+		56264	23704	37622	37637	63605	63605					0.08172091525955238
SVLKDCAVI	9	Carbamidomethyl (C)	_SVLKDC(Carbamidomethyl (C))AVI_	SVLKDC(1)AVI		SVLKDC(96)AVI		0	1	0		nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;ENSG00000065534|ENST00000360304|MYLK;ENST00000514623.1_1_3:123428573-123453020:-|nuORF	nc|ENSG00000065534|Q15746-4|MYLK	nc|ENSG00000065534|Q15746-4|MYLK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.7733459472656	2	502.775885	1003.53722	-0.85708	-0.00043092	-2.9883	-0.0015024	-3.8453	-0.0019333	502.77425388470994	48.976	1.1303	49.436	48.862	49.992	0.45983					53	27	3	0	0	0	0.084975	1	4755	4755		96.19	24.895	1	1610400			56265	1133	37623	37638	63606	63606	17				0.035589808512895615
SVLKDCAVI	9	Carbamidomethyl (C)	_SVLKDC(Carbamidomethyl (C))AVI_					0	1	0		nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;ENSG00000065534|ENST00000360304|MYLK;ENST00000514623.1_1_3:123428573-123453020:-|nuORF	nc|ENSG00000065534|Q15746-4|MYLK	nc|ENSG00000065534|Q15746-4|MYLK	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	502.775885	1003.53722	-0.62239	-0.00031292	-3.3299	-0.0016742	-3.9523	-0.0019871	503.2757849331789	49.591	0.48699	49.567	49.279	49.766	-0.024029	-0.025092	0.00027998	NaN	96.19	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49465			56266	1133	37623	37638			17				0.035589808512895615
SVLKDCAVI	9	Carbamidomethyl (C)	_SVLKDC(Carbamidomethyl (C))AVI_					0	1	0		nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;ENSG00000065534|ENST00000360304|MYLK;ENST00000514623.1_1_3:123428573-123453020:-|nuORF	nc|ENSG00000065534|Q15746-4|MYLK	nc|ENSG00000065534|Q15746-4|MYLK	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	502.775885	1003.53722	-0.95374	-0.00047952	-2.8835	-0.0014498	-3.8373	-0.0019293	502.77450720073557	49.642	0.57585	49.645	49.279	49.855	0.0035973	0.052912	0.00072882	NaN	96.19	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50700			56267	1133	37623	37638			17				0.035589808512895615
SVLKDCAVI	9	Carbamidomethyl (C)	_SVLKDC(Carbamidomethyl (C))AVI_					0	1	0		nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;ENSG00000065534|ENST00000360304|MYLK;ENST00000514623.1_1_3:123428573-123453020:-|nuORF	nc|ENSG00000065534|Q15746-4|MYLK	nc|ENSG00000065534|Q15746-4|MYLK	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	502.775885	1003.53722	0.62786	0.00031567	-4.5329	-0.0022791	-3.9051	-0.0019634	502.77349712314486	48.816	1.0432	49.72	49.21	50.253	0.90424	0.12819	-0.00092974	NaN	96.19	51	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1259700			56268	1133	37623	37638			17				0.035589808512895615
SVLLHARKLQS	11	Unmodified	_SVLLHARKLQS_					0	0	0		ENST00000378204.6_1_8:119123393-119123786:-|nuORF	ENST00000378204.6_1_8:119123393-119123786:-|nuORF	ENST00000378204.6_1_8:119123393-119123786:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.2977294921875	3	417.922578	1250.7459	-0.74771	-0.00031249	-4.1372	-0.001729	-4.8849	-0.0020415	418.25520189203877	55.625	0.85215	55.588	55.243	56.095	-0.036823					43	29	2	0	0	0	0.17272	1	4716	4716		25.892	3.3301	1	67534			56269	10860	37624	37639	63607	63607					0.1305614547973164
SVLLSVKW	8	Unmodified	_SVLLSVKW_					0	0	0		ENSG00000102452|ENST00000251127|NALCN	ENSG00000102452|ENST00000251127|NALCN	ENSG00000102452|ENST00000251127|NALCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.28228759765625	2	466.284203	930.553853	-0.32018	-0.0001493	-4.2772	-0.0019944	-4.5973	-0.0021437	466.28215195154024	21.328	1.7277	20.699	20.12	21.847	-0.62835					106	44	4	0	0	0	0.91472	1	739	739		44.117	3.5442	1	3472100			56270	2005	37625	37640	63608	63608					0.08579849799559724
SVLNLFTRI	9	Unmodified	_SVLNLFTRI_					0	0	0		ENSG00000105325|ENST00000441788|FZR1;nc|ENSG00000105325|Q9UM11|FZR1;nc|ENSG00000105325|Q9UM11-3|FZR1;ENST00000588084.1_1_19:3534295-3534831:+|nuORF	ENSG00000105325|ENST00000441788|FZR1	ENSG00000105325|ENST00000441788|FZR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.817138671875	2	531.818941	1061.62333	-0.69524	-0.00036974	-3.1977	-0.0017006	-3.8929	-0.0020703	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.64922	1	10244	10244		44.117	3.5442	1	1296000			56271	2202	37626	37641	63609	63609					0.09498308748334239
SVLPFQIYY	9	Unmodified	_SVLPFQIYY_					0	0	0		ENSG00000182162|ENST00000381297|P2RY8	ENSG00000182162|ENST00000381297|P2RY8	ENSG00000182162|ENST00000381297|P2RY8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.3001098632812	2	565.30005	1128.58555	1.7233	0.00097418	-1.4946	-0.0008449	0.22869	0.00012928	565.2990516577404	97.089	1.1446	97.494	97.095	98.24	0.40498					79	27	4	0	0	0	0.0034731	4	11660	11660;11674;11686;11701		138.83	34.414	1	2983000			56272	7428	37627	37642	63610;63611;63612;63613	63610					0.026397977628448643
SVLPFQIYY	9	Unmodified	_SVLPFQIYY_					0	0	0		ENSG00000182162|ENST00000381297|P2RY8	ENSG00000182162|ENST00000381297|P2RY8	ENSG00000182162|ENST00000381297|P2RY8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.3001098632812	2	565.30005	1128.58555	1.6744	0.00094653	-1.5933	-0.00090072	0.081046	4.5815E-05	565.299041220833	97.216	1.5144	97.607	97.157	98.672	0.39065					91	36	4	0	0	0	3.1417E-05	4	11719	11719;11731;11743;11756		152.47	70.039	1	3371900			56273	7428	37627	37642	63614;63615;63616;63617	63614					0.026397977628448643
SVLPVPPIEF	10	Unmodified	_SVLPVPPIEF_					0	0	0		nc|ENSG00000288701|Q5JSZ5|PRRC2B;nc|ENSG00000288701|Q5JSZ5-5|PRRC2B	nc|ENSG00000288701|Q5JSZ5|PRRC2B	nc|ENSG00000288701|Q5JSZ5|PRRC2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.3178100585938	2	549.3157	1096.61685	1.2725	0.00069901	2.3031	0.0012651	3.5756	0.0019641	549.3168832768056	100.86	2.4507	100.91	100.43	102.88	0.046356					139	58	4	0	0	0	0.86218	1	10878	10878		32.812	2.4947	1	1880500			56274	15335	37628	37643	63618	63618					0.07240370796944262
SVLPVPPIEF	10	Unmodified	_SVLPVPPIEF_					0	0	0		nc|ENSG00000288701|Q5JSZ5|PRRC2B;nc|ENSG00000288701|Q5JSZ5-5|PRRC2B	nc|ENSG00000288701|Q5JSZ5|PRRC2B	nc|ENSG00000288701|Q5JSZ5|PRRC2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3177490234375	2	549.3157	1096.61685	0.85079	0.00046735	2.6536	0.0014577	3.5044	0.001925	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.8651	1	10592	10592		25.574	1.0549	1	2023500			56275	15335	37628	37643	63619	63619					0.07240370796944262
SVLQAIRKTIC	11	Unmodified	_SVLQAIRKTIC_					0	0	0		ENSG00000055163|ENST00000620254|CYFIP2;nc|ENSG00000055163|Q96F07|CYFIP2	ENSG00000055163|ENST00000620254|CYFIP2	ENSG00000055163|ENST00000620254|CYFIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	411.2427673339844	3	411.244552	1230.71183	-0.18596	-7.6474E-05	-2.2855	-0.00093991	-2.4715	-0.0010164	411.243465393648	103.16	0.60635	103.17	102.88	103.48	0.0082016					22	14	2	0	0	0	0.71803	1	11066	11066		28.577	2.685	1	441640			56276	1025	37629	37644	63620	63620					0.10569980996501727
SVLQKHLRKLV	11	Unmodified	_SVLQKHLRKLV_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2555847167969	3	440.95399	1319.84014	-0.15717	-6.9305E-05	-4.0046	-0.0017658	-4.1618	-0.0018352	440.95216199140106	67.401	0.75828	67.417	66.987	67.745	0.016205					46	32	2	0	0	0	0.17289	1	6291	6291		21.78	4.6137	1	77715			56277	8133	37630	37645	63621	63621					0.19301284301877786
SVLRPLVTL	9	Unmodified	_SVLRPLVTL_					0	0	0			REV__ENST00000404284.6_1_22:35717823-35727385:+|nuORF;REV__ENST00000597958.5_1_10:75256229-75279415:+|nuORF	REV__ENST00000404284.6_1_22:35717823-35727385:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.7535095214844	2	499.32386	996.633166	-0.024256	-1.2112E-05	0.005213	2.603E-06	-0.019043	-9.5086E-06	499.3237820022237	35.956	0.62456	36.203	35.894	36.519	0.24769					22	15	2	0	0	0	0.20789	1	2794	2794		14.137	0	1	109600	+		56278	26281;29275	37631	37646	63622	63622					0.13471496753720658
SVLRQRILKP	10	Unmodified	_SVLRQRILKP_					0	0	0		nc|ENSG00000186684|Q4G0S4-1|CYP27C1;ENSG00000186684|ENST00000664447|CYP27C1;nc|ENSG00000186684|Q4G0S4|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.9293212890625	3	403.931185	1208.77173	-1.8073	-0.00073003	-2.7977	-0.0011301	-4.6051	-0.0018601	403.9299445205196	45.006	1.4855	45.006	44.372	45.858	0					127	36	4	0	0	0	0.89708	1	3335	3335		9.6461	0	1	1542900			56279	7812	37632	37647	63623	63623					0.17569039722025082
SVLRQRILKP	10	Unmodified	_SVLRQRILKP_					0	0	0		nc|ENSG00000186684|Q4G0S4-1|CYP27C1;ENSG00000186684|ENST00000664447|CYP27C1;nc|ENSG00000186684|Q4G0S4|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	403.931185	1208.77173	0.11618	4.6927E-05	-4.7413	-0.0019152	-4.6252	-0.0018683	403.92917581654336	45.307	1.486	45.289	44.485	45.971	-0.018585	0.23457	-0.00064482	NaN	9.6461	112	34	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1529700			56280	7812	37632	37647							0.17569039722025082
SVLRQRILKP	10	Unmodified	_SVLRQRILKP_					0	0	0		nc|ENSG00000186684|Q4G0S4-1|CYP27C1;ENSG00000186684|ENST00000664447|CYP27C1;nc|ENSG00000186684|Q4G0S4|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	403.931185	1208.77173	-1.0011	-0.00040437	-3.7915	-0.0015315	-4.7926	-0.0019359	403.92954938666844	45.101	1.3948	45.07	44.489	45.884	-0.031067	0.015651	0.0005062	NaN	9.6461	106	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2231800			56281	7812	37632	37647							0.17569039722025082
SVLRQRILKP	10	Unmodified	_SVLRQRILKP_					0	0	0		nc|ENSG00000186684|Q4G0S4-1|CYP27C1;ENSG00000186684|ENST00000664447|CYP27C1;nc|ENSG00000186684|Q4G0S4|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	403.931185	1208.77173	1.9768	0.00079851	-6.7504	-0.0027267	-4.7735	-0.0019282	403.92835613042257	45.07	1.4213	45.066	44.498	45.92	-0.0041618	0.011557	-0.0030793	NaN	9.6461	114	32	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1916800			56282	7812	37632	37647							0.17569039722025082
SVLRQRILKP	10	Unmodified	_SVLRQRILKP_					0	0	0		nc|ENSG00000186684|Q4G0S4-1|CYP27C1;ENSG00000186684|ENST00000664447|CYP27C1;nc|ENSG00000186684|Q4G0S4|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	403.931185	1208.77173	-1.8936	-0.00076488	-2.8837	-0.0011648	-4.7772	-0.0019297	403.92993259224266	44.993	1.5182	45.005	44.305	45.823	0.012058	-0.049096	0.0016063	NaN	9.6461	123	36	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2236700			56283	7812	37632	37647							0.17569039722025082
SVLRQRILKP	10	Unmodified	_SVLRQRILKP_					0	0	0		nc|ENSG00000186684|Q4G0S4-1|CYP27C1;ENSG00000186684|ENST00000664447|CYP27C1;nc|ENSG00000186684|Q4G0S4|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	403.931185	1208.77173	0.23236	9.3859E-05	-4.8197	-0.0019468	-4.5873	-0.001853	403.92912870145676	45.002	1.4498	45.051	44.451	45.901	0.048996	-0.0035558	-0.00073976	NaN	9.6461	118	35	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1764400			56284	7812	37632	37647							0.17569039722025082
SVLRQRILKP	10	Unmodified	_SVLRQRILKP_					0	0	0		nc|ENSG00000186684|Q4G0S4-1|CYP27C1;ENSG00000186684|ENST00000664447|CYP27C1;nc|ENSG00000186684|Q4G0S4|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	403.931185	1208.77173	-0.40526	-0.0001637	-4.2783	-0.0017281	-4.6835	-0.0018918	403.92934945595727	44.962	1.5516	44.893	44.391	45.943	-0.068634	-0.1608	-8.366E-05	NaN	9.6461	125	38	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1647000			56285	7812	37632	37647							0.17569039722025082
SVLSVGLEP	9	Unmodified	_SVLSVGLEP_					0	0	0		ENST00000380711.3_1_22:51021469-51022136:+|nuORF	ENST00000380711.3_1_22:51021469-51022136:+|nuORF	ENST00000380711.3_1_22:51021469-51022136:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7546691894531	2	450.755475	899.496398	-0.14135	-6.3713E-05	-2.6678	-0.0012025	-2.8092	-0.0012662	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.7932	1	8223	8223		26.693	1.2427	1	337080			56286	10931	37633	37648	63624	63624					0.042629628033296285
SVLTKTKR	8	Unmodified	_SVLTKTKR_					0	0	0			REV__ENSG00000110328|ENST00000227756|GALNT18	REV__ENSG00000110328|ENST00000227756|GALNT18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.79730224609375	2	466.798009	931.581465	0.98178	0.00045829	-1.6856	-0.00078684	-0.70384	-0.00032855	466.7969983674982	18.812	1.0462	18.886	18.723	19.769	0.073465					58	33	3	0	0	0	0.8347	1	347	347		23.042	0	1	203960	+		56287	17809	37634	37649	63625	63625					0.11293753059783285
SVLVRLPK	8	Unmodified	_SVLVRLPK_					0	0	0			REV__ENSG00000046889|ENST00000288368|PREX2	REV__ENSG00000046889|ENST00000288368|PREX2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30242919921875	2	456.30547	910.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.613	1	21.548	21.048	22.048	-0.064743								0	0	0	0.30478	1	638	638		17.365	0	1		+		56288	16346	37635	37650	63626	63626					0.1375124492778923
SVLYLDNPSF	10	Unmodified	_SVLYLDNPSF_					0	0	0			REV__nc|ENSG00000166596|Q8N1V2-3|CFAP52	REV__nc|ENSG00000166596|Q8N1V2-3|CFAP52	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	577.791748046875	2	577.790047	1153.56554	-1.6473	-0.00095178	-0.22567	-0.00013039	-1.873	-0.0010822	577.7897618371853	60.998	0.49516	61.388	61.067	61.562	0.38945					28	16	2	0	0	0	0.44803	1	6486	6486		60.118	3.3972	1	575130	+		56289	21308	37636	37651	63627	63627					-0.0050999796776523
SVMLENLEL	9	Unmodified	_SVMLENLEL_					0	0	0		ENSG00000131849|ENST00000254166|ZNF132	ENSG00000131849|ENST00000254166|ZNF132	ENSG00000131849|ENST00000254166|ZNF132	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2772827148438	2	524.273175	1046.5318	2.7827	0.0014589	4.2298	0.0022176	7.0125	0.0036765	524.2754281662812	25.682	3.5829	25.251	24.138	27.721	-0.4311					230	81	7	0	0	0	0.14236	1	1411	1411		85.161	10.906	1	23207000			56290	3754	37637	37652	63628	63628					0.01039257268826077
SVNAGISYLLK	11	Unmodified	_SVNAGISYLLK_					0	0	0			REV__ENSG00000102763|ENST00000379310|VWA8	REV__ENSG00000102763|ENST00000379310|VWA8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8330078125	2	582.834788	1163.65502	-0.83199	-0.00048491	-2.8678	-0.0016715	-3.6998	-0.0021564	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.72739	1	9786	9786		27.047	1.4733	1	796430	+		56291	17353	37638	37653	63629	63629					0.07974256711599992
SVNGGFKP	8	Unmodified	_SVNGGFKP_					0	0	0			REV__ENST00000437898.1_1_1:19536999-19566936:+|nuORF	REV__ENST00000437898.1_1_1:19536999-19566936:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.739501953125	2	403.213778	804.413003	1.7801	0.00071774	-0.4044	-0.00016306	1.3757	0.00055468	403.2134829458089	34.814	0.59085	35.024	34.769	35.36	0.21003					20	14	2	0	0	0	0.4196	1	2627	2627		6.7355	0	1	138080	+		56292	26716	37639	37654	63630	63630					0.0029727114614388483
SVNGKVLSK	9	Unmodified	_SVNGKVLSK_					0	0	0		ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.2821350097656	2	466.282192	930.549831	0.4139	0.00019299	-0.65742	-0.00030654	-0.24352	-0.00011355	466.2818382337011	21.109	1.5089	20.65	20.145	21.654	-0.4591					92	35	4	0	0	0	0.026876	5	745	704;727;745;757;770		120.31	42.988	1	2988900			56293	2066	37640	37655	63631;63632;63633;63634;63635	63633					0.08177760305841275
SVNGKVLSK	9	Unmodified	_SVNGKVLSK_					0	0	0		ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.2820739746094	2	466.282192	930.549831	-0.32018	-0.0001493	0.036465	1.7003E-05	-0.28372	-0.00013229	466.28215195154024	21.328	1.7277	20.699	20.12	21.847	-0.62835					106	44	4	0	0	0	0.01194	7	767	746;755;767;778;790;798;807		131.62	43.862	1	3472100			56294	2066	37640	37655	63636;63637;63638;63639;63640;63641;63642	63638					0.08177760305841275
SVNIISLPG	9	Unmodified	_SVNIISLPG_					0	0	0		ENST00000234310.7_1_2:68406085-68406229:-|nuORF	ENST00000234310.7_1_2:68406085-68406229:-|nuORF	ENST00000234310.7_1_2:68406085-68406229:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2643737792969	2	450.263468	898.512382	-1.6704	-0.00075212	2.2112	0.00099561	0.54079	0.0002435	450.26422275635036	29.694	0.8719	29.717	29.352	30.224	0.022985					48	19	4	0	0	0	0.58668	1	1906	1906		47.657	5.2612	1	347100			56295	9228	37641	37656	63643	63643					0.059066690402460154
SVNIVRGQAKK	11	Unmodified	_SVNIVRGQAKK_					0	0	0			REV__nc|ENSG00000073737|Q9BPW9-2|DHRS9	REV__nc|ENSG00000073737|Q9BPW9-2|DHRS9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.57891845703125	3	400.578811	1198.7146	3.1799	0.0012738	1.0986	0.00044006	4.2785	0.0017139	400.5790522363323	116.4	0.81905	116.42	115.99	116.81	0.026466					36	27	2	0	0	0	0.74771	1	12823	12823		22.562	1.7244	1	41735	+		56296	16679	37642	37657	63644	63644					0.12319572445630911
SVNKPGLVG	9	Unmodified	_SVNKPGLVG_					0	0	0			REV__ENSG00000149577|ENST00000324225|SIDT2	REV__ENSG00000149577|ENST00000324225|SIDT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002014160156	2	435.75581	869.497067	-0.69365	-0.00030226	-0.12809	-5.5816E-05	-0.82174	-0.00035808	435.75576046508695	71.008	0.75102	71.393	71.042	71.793	0.38449					25	17	2	0	0	0	0.20789	1	7907	7907		55.504	2.1528	1	104380	+		56297	20181	37643	37658	63645	63645					0.05709802243052309
SVNKPGLVG	9	Unmodified	_SVNKPGLVG_					0	0	0			REV__ENSG00000149577|ENST00000324225|SIDT2	REV__ENSG00000149577|ENST00000324225|SIDT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.30029296875	2	435.75581	869.497067	0.30724	0.00013388	-1.5325	-0.00066779	-1.2253	-0.00053391	435.7549991415485	73.082	0.76653	73.636	73.232	73.999	0.55386					48	22	3	0	0	0	0.20752	1	8173	8173		44.117	3.5442	1	1163800	+		56298	20181	37643	37658	63646	63646					0.05709802243052309
SVNKPGLVG	9	Unmodified	_SVNKPGLVG_					0	0	0			REV__ENSG00000149577|ENST00000324225|SIDT2	REV__ENSG00000149577|ENST00000324225|SIDT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001708984375	2	435.75581	869.497067	0.24392	0.00010629	-1.0461	-0.00045583	-0.80214	-0.00034954	435.7551532009638	72.009	0.86726	72.559	72.279	73.146	0.55008					31	20	3	0	0	0	0.20789	1	8137	8137		65.803	25.231	1	112730	+		56299	20181	37643	37658	63647	63647					0.05709802243052309
SVNKTVIQ	8	Unmodified	_SVNKTVIQ_					0	0	0		ENST00000411735.2_1_1:191115527-191115704:-|nuORF	ENST00000411735.2_1_1:191115527-191115704:-|nuORF	ENST00000411735.2_1_1:191115527-191115704:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.6359558105469	2	444.761092	887.507631	-0.27597	-0.00012274	0.57748	0.00025684	0.30151	0.0001341	444.7610388921212	38.31	2.0125	38.832	37.614	39.626	0.52235					139	49	5	0	0	0	0.4196	1	3140	3140		21.96	0	1	1002700			56300	11330	37644	37659	63648	63648					0.059377848974691005
SVNLKVSPK	9	Unmodified	_SVNLKVSPK_					0	0	0		ENSG00000164985|ENST00000380733|PSIP1;nc|ENSG00000164985|O75475-3|PSIP1;nc|ENSG00000164985|O75475-2|PSIP1	ENSG00000164985|ENST00000380733|PSIP1	ENSG00000164985|ENST00000380733|PSIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.298828125	2	486.297842	970.581131	0.36518	0.00017758	-1.0979	-0.0005339	-0.73271	-0.00035632	486.2970367181107	29.472	0.64387	29.383	29.148	29.792	-0.089544					41	14	4	0	0	0	0.022958	1	1880	1880		123.21	51.331	1	1055900			56301	6035	37645	37660	63649	63649					0.09466333339946686
SVNLKVSPK	9	Unmodified	_SVNLKVSPK_					0	0	0		ENSG00000164985|ENST00000380733|PSIP1;nc|ENSG00000164985|O75475-3|PSIP1;nc|ENSG00000164985|O75475-2|PSIP1	ENSG00000164985|ENST00000380733|PSIP1	ENSG00000164985|ENST00000380733|PSIP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	486.297842	970.581131	-0.88405	-0.00042991	0.28753	0.00013982	-0.59652	-0.00029009	486.2976419958694	29.308	0.65007	29.279	29.04	29.691	-0.029207	-0.051973	0.00063563	NaN	123.21	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	845750			56302	6035	37645	37660							0.09466333339946686
SVNSAGSSAPV	11	Unmodified	_SVNSAGSSAPV_					0	0	0		ENSG00000131378|ENST00000334133|RFTN1	ENSG00000131378|ENST00000334133|RFTN1	ENSG00000131378|ENST00000334133|RFTN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	488.23895263671875	2	488.240721	974.466889	-0.68617	-0.00033502	-3.2974	-0.0016099	-3.9835	-0.0019449	488.23901315682974	60.731	0.68857	60.739	60.422	61.11	0.0081215					89	25	5	0	0	0	0.67778	1	5273	5273		35.152	3.5178	1	1290700			56303	3726	37646	37661	63650	63650					-0.021366012127941758
SVNSATFI	8	Unmodified	_SVNSATFI_					0	0	0			REV__nc|ENSG00000143569|Q14157-4|UBAP2L	REV__nc|ENSG00000143569|Q14157-4|UBAP2L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7187194824219	2	419.718893	837.423233	0.21807	9.1526E-05	-0.48356	-0.00020296	-0.26549	-0.00011143	419.718555621952	43.498	1.1548	43.555	43.112	44.267	0.056744					66	27	3	0	0	0	0.87479	3	2998	2986;2998;3008		40.573	5.0535	1	860890	+		56304	29903	37647	37662	63651;63652;63653	63652					-0.0019816591928929483
SVNSHIYQR	9	Unmodified	_SVNSHIYQR_					0	0	0		ENSG00000177409|ENST00000318238|SAMD9L	ENSG00000177409|ENST00000318238|SAMD9L	ENSG00000177409|ENST00000318238|SAMD9L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.284912109375	2	552.283254	1102.55196	0.29404	0.00016239	0.26226	0.00014484	0.5563	0.00030723	552.2832808011796	25.646	0.64706	25.605	25.332	25.979	-0.04117					22	17	2	0	0	0	0.64555	1	1104	1104		44.377	11.627	1	49260			56305	7138	37648	37663	63654	63654					0.004781890436561298
SVNSHIYQR	9	Unmodified	_SVNSHIYQR_					0	0	0		ENSG00000177409|ENST00000318238|SAMD9L	ENSG00000177409|ENST00000318238|SAMD9L	ENSG00000177409|ENST00000318238|SAMD9L	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	552.283254	1102.55196	0.9049	0.00049976	-0.88801	-0.00049043	0.016889	9.3276E-06	552.2826964744314	25.737	0.53307	25.705	25.419	25.952	-0.032125	0.049882	-0.00086417	NaN	44.377	18	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27676			56306	7138	37648	37663							0.004781890436561298
SVNSTVLVK	9	Unmodified	_SVNSTVLVK_					0	0	0		nc|ENSG00000160593|Q86YT9-4|JAML;nc|ENSG00000160593|Q86YT9-2|JAML;ENSG00000160593|ENST00000356289|JAML	nc|ENSG00000160593|Q86YT9-4|JAML	nc|ENSG00000160593|Q86YT9-4|JAML	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.78173828125	2	473.782025	945.549496	0.76185	0.00036095	-0.19655	-9.3122E-05	0.5653	0.00026783	473.7817677101334	35.068	1.0676	35.316	34.976	36.043	0.24769					87	27	4	0	0	0	0.096326	2	2692	2667;2692		93.143	10.903	1	2207000			56307	5596	37649	37664	63655;63656	63656					0.07454340586002672
SVNSTVLVK	9	Unmodified	_SVNSTVLVK_					0	0	0		nc|ENSG00000160593|Q86YT9-4|JAML;nc|ENSG00000160593|Q86YT9-2|JAML;ENSG00000160593|ENST00000356289|JAML	nc|ENSG00000160593|Q86YT9-4|JAML	nc|ENSG00000160593|Q86YT9-4|JAML	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.78204345703125	2	473.782025	945.549496	0.47806	0.00022649	0.062581	2.965E-05	0.54064	0.00025614	473.7818768654717	34.999	1.1766	35.38	35.136	36.313	0.3812					87	30	4	0	0	0	0.096326	1	2703	2703		93.143	24.356	1	2189600			56308	5596	37649	37664	63657	63657					0.07454340586002672
SVPAPSAAL	9	Unmodified	_SVPAPSAAL_					0	0	0			REV__ENSG00000067191|ENST00000394303|CACNB1	REV__ENSG00000067191|ENST00000394303|CACNB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7284851074219	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.7932	1	7605	7605		18.324	0	1	159770	+		56309	16538	37650	37665	63658	63658					0.030704244603612096
SVPEETEKGY	10	Unmodified	_SVPEETEKGY_					0	0	0		nc|ENSG00000261934|Q9Y5G4-2|PCDHGA9;ENSG00000261934|ENST00000573521|PCDHGA9	nc|ENSG00000261934|Q9Y5G4-2|PCDHGA9	nc|ENSG00000261934|Q9Y5G4-2|PCDHGA9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.766845703125	2	569.766768	1137.51898	0.50789	0.00028938	-0.46704	-0.0002661	0.040851	2.3275E-05	569.7663611831885	60.525	0.47499	60.641	60.356	60.831	0.11676					53	19	3	0	0	0	0.77314	1	5243	5243		40.778	2.9666	1	513000			56310	8930	37651	37666	63659	63659					-0.04427482589699139
SVPHLALHA	9	Unmodified	_SVPHLALHA_					0	0	0		ENSG00000102053|ENST00000338957|ZC3H12B;nc|ENSG00000102053|Q5HYM0-2|ZC3H12B	ENSG00000102053|ENST00000338957|ZC3H12B	ENSG00000102053|ENST00000338957|ZC3H12B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.76708984375	2	472.769252	943.52395	-1.1355	-0.00053681	-3.1204	-0.0014752	-4.2559	-0.002012	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.76402	1	8006	8006		35.201	6.0512	1	292450			56311	1984	37652	37667	63660	63660					0.04992910854218735
SVPIATVII	9	Unmodified	_SVPIATVII_					0	0	0		nc|ENSG00000138030|P50053-2|KHK	nc|ENSG00000138030|P50053-2|KHK	nc|ENSG00000138030|P50053-2|KHK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7919616699219	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.7932	1	3337	3337		17.365	0	1	652510			56312	14950	37653	37668	63661	63661					0.10984716596760791
SVPIPVLSSL	10	Unmodified	_SVPIPVLSSL_					0	0	0			REV__ENST00000374810.7_1_20:33298341-33298617:+|nuORF	REV__ENST00000374810.7_1_20:33298341-33298617:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3097229003906	2	506.307875	1010.6012	-0.49442	-0.00025033	2.9904	0.001514	2.4959	0.0012637	506.30930722746564	51.737	1.7906	51.772	50.998	52.788	0.034588					70	53	2	0	0	0	0.86272	1	4239	4239		24.519	2.5593	1	138440	+		56313	25797	37654	37669	63662	63662					0.09632084279917308
SVPLFARRLPL	11	Unmodified	_SVPLFARRLPL_					0	0	0			REV__ENST00000379561.5_1_13:41240138-41240633:-|nuORF	REV__ENST00000379561.5_1_13:41240138-41240633:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	423.5975036621094	3	423.599435	1267.77648	-1.87	-0.00079214	-2.3626	-0.0010008	-4.2326	-0.0017929	423.59834897722675	105.64	2.006	105.71	105.05	107.06	0.073112					176	48	5	0	0	0	0.73621	1	11182	11182		25.126	0.89417	1	4588600	+		56314	25923	37655	37670	63663	63663					0.15329923864783268
SVPLGLGLL	9	Unmodified	_SVPLGLGLL_					0	0	0			REV__ENSG00000257008|ENST00000582579|GPR142	REV__ENSG00000257008|ENST00000582579|GPR142	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78009033203125	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.76402	1	2527	2527		35.201	7.3185	1	3714500	+		56315	23914	37656	37671	63664	63664					0.10388447425293634
SVPLGLGLL	9	Unmodified	_SVPLGLGLL_					0	0	0			REV__ENSG00000257008|ENST00000582579|GPR142	REV__ENSG00000257008|ENST00000582579|GPR142	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7796630859375	2	434.778754	867.542954	-0.91901	-0.00039957	3.2028	0.0013925	2.2837	0.00099292	434.7800246732522	44.2	1.4198	45.044	44.534	45.954	0.84437					118	34	4	0	0	0	0.76996	1	4144	4144		33.516	0	1	4932000	+		56316	23914	37656	37671	63665	63665					0.10388447425293634
SVPLLQLL	8	Unmodified	_SVPLLQLL_					0	0	0			REV__ENST00000515265.2_1_5:140022188-140024328:+|nuORF	REV__ENST00000515265.2_1_5:140022188-140024328:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.78765869140625	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.86288	1	3576	3576		26.796	0	1	539980	+		56317	17978	37657	37672	63666	63666					0.11308733942325944
SVPLLQLL	8	Unmodified	_SVPLLQLL_					0	0	0			REV__ENST00000515265.2_1_5:140022188-140024328:+|nuORF	REV__ENST00000515265.2_1_5:140022188-140024328:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7877502441406	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.87922	1	3519	3519		31.955	0	1	493390	+		56318	17978	37657	37672	63667	63667					0.11308733942325944
SVPLLQLL	8	Unmodified	_SVPLLQLL_					0	0	0			REV__ENST00000515265.2_1_5:140022188-140024328:+|nuORF	REV__ENST00000515265.2_1_5:140022188-140024328:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78826904296875	2	441.786579	881.558604	-0.54459	-0.00024059	3.5319	0.0015603	2.9873	0.0013197	441.7881167581505	37.981	2.8453	38.294	37.083	39.929	0.31312					193	69	5	0	0	0	0.81548	1	3091	3091		20.482	0	1	61531000	+		56319	17978	37657	37672	63668	63668					0.11308733942325944
SVPLPVSLTL	10	Unmodified	_SVPLPVSLTL_					0	0	0			REV__ENST00000488765.1_1_13:113750615-113750798:+|nuORF	REV__ENST00000488765.1_1_13:113750615-113750798:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3165893554688	2	513.3157	1024.61685	-1.5202	-0.00078036	3.031	0.0015559	1.5108	0.00077549	513.3171098240366	43.168	1.3566	43.168	42.754	44.111	0					83	32	4	0	0	0	0.86718	1	3043	3043		27.882	3.6795	1	698430	+		56320	27604	37658	37673	63669	63669					0.10552370796949617
SVPLQPRKA	9	Unmodified	_SVPLQPRKA_					0	0	0			REV__ENSG00000140836|ENST00000268489|ZFHX3	REV__ENSG00000140836|ENST00000268489|ZFHX3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.30657958984375	2	498.303458	994.592364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.793	1	52.863	52.363	53.363	0.070713								0	0	0	0.34024	1	4277	4277		17.365	0	1		+		56321	15640	37659	37674	63670	63670					0.09485155434083481
SVPLSIALL	9	Unmodified	_SVPLSIALL_					0	0	0			REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7900695800781	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.77546	1	3129	3129		31.955	6.5047	1	759950	+		56322	28798	37660	37675	63671	63671					0.10984716596738053
SVPLSIALL	9	Unmodified	_SVPLSIALL_					0	0	0			REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7933654785156	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.317	1	47.317	46.817	47.817	0								0	0	0	0.30053	1	3614	3614		30.504	3.7075	1		+		56323	28798	37660	37675	63672	63672					0.10984716596738053
SVPLSIALL	9	Unmodified	_SVPLSIALL_					0	0	0			REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7899169921875	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.7932	1	2911	2911		24.203	5.8783	1	605230	+		56324	28798	37660	37675	63673	63673					0.10984716596738053
SVPLSIALL	9	Unmodified	_SVPLSIALL_					0	0	0			REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	REV__ENST00000562407.1_1_16:23695275-23695332:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79180908203125	2	456.791861	911.569169	-0.22016	-0.00010057	2.6195	0.0011965	2.3993	0.001096	456.79291197659967	44.777	1.8237	44.709	43.946	45.77	-0.068634					85	44	3	0	0	0	0.7932	1	3318	3318		24.203	3.7209	1	224230	+		56325	28798	37660	37675	63674	63674					0.10984716596738053
SVPLTNKLPVI	11	Unmodified	_SVPLTNKLPVI_					0	0	0		ENST00000455482.1_1_10:95898687-95899154:+|nuORF	ENST00000455482.1_1_10:95898687-95899154:+|nuORF	ENST00000455482.1_1_10:95898687-95899154:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8671264648438	2	590.868631	1179.72271	-0.64254	-0.00037966	-3.2896	-0.0019437	-3.9321	-0.0023234	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.58425	1	11158	11158		45.972	3.5761	1	52912000			56326	11951	37661	37676	63675	63675					0.14003706642415636
SVPLTNKLPVI	11	Unmodified	_SVPLTNKLPVI_					0	0	0		ENST00000455482.1_1_10:95898687-95899154:+|nuORF	ENST00000455482.1_1_10:95898687-95899154:+|nuORF	ENST00000455482.1_1_10:95898687-95899154:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8662719726562	2	590.868631	1179.72271	-0.76513	-0.00045209	-3.0712	-0.0018147	-3.8363	-0.0022667	590.866944733612	103.39	3.9794	103.43	102.79	106.77	0.041481					295	95	6	0	0	0	0.6921	1	11274	11274		32.812	0	1	54208000			56327	11951	37661	37676	63676	63676					0.14003706642415636
SVPNVLAKAL	10	Unmodified	_SVPNVLAKAL_					0	0	0		nc|ENSG00000050820|P56945-8|BCAR1	nc|ENSG00000050820|P56945-8|BCAR1	nc|ENSG00000050820|P56945-8|BCAR1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3071594238281	2	506.313492	1010.61243	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.565	1	63.532	63.032	64.032	-0.033714								0	0	0	0.45132	1	6035	6035		25.574	1.3713	1				56328	14752	37662	37677	63677	63677					0.1075490637402936
SVPQEQPKELK	11	Unmodified	_SVPQEQPKELK_					0	0	0			REV__nc|ENSG00000175582|P20340-3|RAB6A	REV__nc|ENSG00000175582|P20340-3|RAB6A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8596801757812	2	641.853709	1281.69287	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.72	1	114.71	114.21	115.21	-0.016441								0	0	0	0.56276	1	13833	13833		25.126	3.4402	1		+		56329	22074	37663	37678	63678	63678					0.06328722906414441
SVPQEQPKELK	11	Unmodified	_SVPQEQPKELK_					0	0	0			REV__nc|ENSG00000175582|P20340-3|RAB6A	REV__nc|ENSG00000175582|P20340-3|RAB6A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8624877929688	2	641.853709	1281.69287	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.86	1	114.84	114.34	115.34	-0.016441								0	0	0	0.56276	1	13849	13849		33.922	7.8582	1		+		56330	22074	37663	37678	63679	63679					0.06328722906414441
SVPQILII	8	Unmodified	_SVPQILII_					0	0	0		nc|ENSG00000165816|Q5GFL6-2|VWA2;ENSG00000165816|ENST00000392982|VWA2	nc|ENSG00000165816|Q5GFL6-2|VWA2	nc|ENSG00000165816|Q5GFL6-2|VWA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78790283203125	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.80706	1	3249	3249		19.36	0	1	448230			56331	6129	37664	37679	63680	63680					0.11308733942348681
SVPQILII	8	Unmodified	_SVPQILII_					0	0	0		nc|ENSG00000165816|Q5GFL6-2|VWA2;ENSG00000165816|ENST00000392982|VWA2	nc|ENSG00000165816|Q5GFL6-2|VWA2	nc|ENSG00000165816|Q5GFL6-2|VWA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.787841796875	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.82464	1	2521	2521		21.702	0	1	12467000			56332	6129	37664	37679	63681	63681					0.11308733942348681
SVPRGPGR	8	Unmodified	_SVPRGPGR_					0	0	0			REV__ENST00000536336.5_1_11:18633859-18655855:-|nuORF	REV__ENST00000536336.5_1_11:18633859-18655855:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2371826171875	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.87064	1	7041	7041		29.15	0.89528	1	1341700	+		56333	22316	37665	37680	63682	63682					0.04243184505912723
SVPRKPGSLA	10	Unmodified	_SVPRKPGSLA_					0	0	0		ENST00000560762.5_1_15:23033924-23034190:-|nuORF	ENST00000560762.5_1_15:23033924-23034190:-|nuORF	ENST00000560762.5_1_15:23033924-23034190:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.30072021484375	2	506.300916	1010.58728	-0.057036	-2.8877E-05	0.14532	7.3574E-05	0.088281	4.4697E-05	506.3009364840715	96.693	1.2093	96.756	96.133	97.342	0.062225					68	27	3	0	0	0	0.86348	1	10177	10177		31.53	0	1	463280			56334	13819	37666	37681	63683	63683					0.0824085157147465
SVPRPLTTI	9	Unmodified	_SVPRPLTTI_					0	0	0		nc|ENSG00000143479|O43781-2|DYRK3;ENSG00000143479|ENST00000367109|DYRK3	nc|ENSG00000143479|O43781-2|DYRK3	nc|ENSG00000143479|O43781-2|DYRK3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.2951965332031	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.022	1	64.987	64.487	65.487	-0.034798								0	0	0	0.32039	1	6229	6229		44.117	5.3107	1				56335	4635	37667	37682	63684	63684					0.08914333339930636
SVPRPTVRA	9	Unmodified	_SVPRPTVRA_					0	0	0			REV__ENST00000540458.5_1_12:6950163-6950600:+|nuORF	REV__ENST00000540458.5_1_12:6950163-6950600:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7967529296875	2	491.793258	981.571963	0.13478	6.6286E-05	4.4765	0.0022015	4.6113	0.0022678	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.69624	1	5641	5641		40.778	6.6056	1	176030	+		56336	28464	37668	37683	63685	63685					0.08043984774280943
SVPSAQKIIL	10	Unmodified	_SVPSAQKIIL_					0	0	0		ENST00000605755.5_1_1:85135569-85156059:-|nuORF	ENST00000605755.5_1_1:85135569-85156059:-|nuORF	ENST00000605755.5_1_1:85135569-85156059:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.3290405273438	2	528.326599	1054.63865	0.16574	8.7566E-05	1.9206	0.0010147	2.0863	0.0011023	528.32736713568	38.345	1.4547	38.317	37.949	39.403	-0.027843					35	21	2	0	0	0	0.85934	1	2576	2576		35.618	0.41757	1	207530			56337	14434	37669	37684	63686	63686					0.11351175545541992
SVPVGRQP	8	Unmodified	_SVPVGRQP_					0	0	0		nc|ENSG00000131023|O95835-2|LATS1;ENST00000542747.5_1_6:149997344-150023094:-|nuORF;ENST00000441107.5_1_6:149982867-150018260:-|nuORF;ENSG00000131023|ENST00000543571|LATS1	nc|ENSG00000131023|O95835-2|LATS1	nc|ENSG00000131023|O95835-2|LATS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.5995178222656	2	420.240327	838.466101	1.5571	0.00065437	-4.2661	-0.0017928	-2.709	-0.0011384	420.2384334401676	24.09	0.37965	23.577	23.322	23.702	-0.51365					12	8	2	0	0	0	0.4196	1	1154	1154		33.516	8.0654	1	35068			56338	3708	37670	37685	63687	63687					0.040406489287988734
SVPVIGALL	9	Unmodified	_SVPVIGALL_					0	0	0		ENST00000566581.5_1_15:34656349-34659376:-|nuORF;ENSG00000176454|ENST00000314891|LPCAT4	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25323486328125	2	434.778754	867.542954	-1.2392	-0.00053877	4.3441	0.0018887	3.105	0.00135	434.780720167778	83.954	1.0747	83.954	83.625	84.7	0					35	25	2	0	0	0	0.20789	1	7910	7910		24.203	0	1	55002			56339	7082	37671	37686	63688	63688					0.10388447425293634
SVPVLTLLA	9	Unmodified	_SVPVLTLLA_					0	0	0			REV__ENSG00000165215|ENST00000395145|CLDN3	REV__ENSG00000165215|ENST00000395145|CLDN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7911376953125	2	456.791861	911.569169	-1.6737	-0.00076455	2.8822	0.0013166	1.2085	0.00055202	456.79302395455574	41.288	2.2955	41.922	41.391	43.687	0.6339					167	59	4	0	0	0	0.77546	1	3615	3615		31.955	0	1	9370200	+		56340	21163	37672	37687	63689	63689					0.10984716596749422
SVPVSILPLS	10	Unmodified	_SVPVSILPLS_					0	0	0			REV__ENST00000557056.5_1_14:24792528-24800258:-|nuORF	REV__ENST00000557056.5_1_14:24792528-24800258:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8005676269531	2	506.307875	1010.6012	-0.59205	-0.00029976	3.1358	0.0015877	2.5437	0.0012879	506.30928765160996	48.157	0.64032	48.132	47.759	48.4	-0.025112					25	16	2	0	0	0	0.37624	1	4072	4072		32.812	7.2384	1	122360	+		56341	28712	37673	37688	63690	63690					0.09632084279917308
SVPVSILPLS	10	Unmodified	_SVPVSILPLS_					0	0	0			REV__ENST00000557056.5_1_14:24792528-24800258:-|nuORF	REV__ENST00000557056.5_1_14:24792528-24800258:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	506.307875	1010.6012	-0.66063	-0.00033448	3.1191	0.0015792	2.4584	0.0012447	506.3093322513248	48.273	0.64115	48.271	47.93	48.571	-0.002449	0.15371	0.00017278	NaN	32.812	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84883	+		56342	28712	37673	37688							0.09632084279917308
SVPVVVLCEIA	11	Unmodified	_SVPVVVLCEIA_					0	0	0			REV__nc|ENSG00000101452|Q9H5Z1-2|DHX35	REV__nc|ENSG00000101452|Q9H5Z1-2|DHX35	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	564.3218383789062	2	564.820292	1127.62603	0.45607	0.0002576	3.7054	0.0020929	4.1615	0.0023505	564.8211027394868	55.353	0.23054	55.445	55.265	55.495	0.091167					7	5	2	0	0	0	0.1728	1	4630	4630		12.812	0	1	27170	+		56343	17282	37674	37689	63691	63691					0.0673239609097891
SVPYSVSNT	9	Unmodified	_SVPYSVSNT_					0	0	0		ENSG00000178295|ENST00000381254|GEN1	ENSG00000178295|ENST00000381254|GEN1	ENSG00000178295|ENST00000381254|GEN1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.2274475097656	2	477.232364	952.450176	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.28	1	69.345	68.845	69.845	0.065506								0	0	0	0.30778	1	6244	6244		27.882	1.1893	1				56344	7197	37675	37690	63692	63692					-0.027951020987529773
SVQHLILLH	9	Unmodified	_SVQHLILLH_					0	0	0		ENSG00000204278|ENST00000421688|TMEM235	ENSG00000204278|ENST00000421688|TMEM235	ENSG00000204278|ENST00000421688|TMEM235	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8007202148438	2	530.319109	1058.62366	0.18343	9.7276E-05	-1.7091	-0.00090637	-1.5257	-0.00080909	530.3178543680806	19.118	0.56777	18.488	18.233	18.801	-0.6296					24	12	3	0	0	0	0.20789	1	507	507		12.207	0	1	62901			56345	8428	37676	37691	63693	63693					0.09669728468179528
SVQLKLALT	9	Unmodified	_SVQLKLALT_					0	0	0			REV__ENST00000513638.5_1_1:89889947-89890097:+|nuORF	REV__ENST00000513638.5_1_1:89889947-89890097:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.25262451171875	2	486.808042	971.601532	0.79351	0.00038629	-0.59347	-0.00028891	0.20004	9.7381E-05	486.80753089812845	28.54	0.53124	28.367	28.057	28.588	-0.17336					25	13	3	0	0	0	0.20789	1	1767	1767		26.693	0	1	96738	+		56346	27995	37677	37692	63694	63694					0.11459503999742537
SVQNTIDY	8	Unmodified	_SVQNTIDY_					0	0	0			REV__ENST00000546810.1_1_12:56367874-56383936:+|nuORF	REV__ENST00000546810.1_1_12:56367874-56383936:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.2242736816406	2	470.224539	938.434526	-1.7436	-0.00081987	1.9148	0.00090037	0.17119	8.05E-05	470.225297390611	39.067	0.90396	39.621	39.236	40.14	0.55449					38	20	3	0	0	0	0.81485	1	3281	3281		62.107	7.3311	1	388680	+		56347	28540	37678	37693	63695	63695					-0.03715388615819393
SVQPKLAH	8	Unmodified	_SVQPKLAH_					0	0	0			REV__ENSG00000018510|ENST00000264167|AGPS	REV__ENSG00000018510|ENST00000264167|AGPS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.2555847167969	2	440.255977	878.497401	-0.15821	-6.9655E-05	-1.3141	-0.00057856	-1.4724	-0.00064822	440.25531510537985	67.089	0.61319	67.105	66.828	67.441	0.016205					41	26	2	0	0	0	0.884	1	6291	6291		33.516	3.0119	1	138210	+		56348	16224	37679	37694	63696	63696					0.05329221962892916
SVQPSSSLSAR	11	Unmodified	_SVQPSSSLSAR_					0	0	0		ENSG00000136536|ENST00000409175|MARCHF7	ENSG00000136536|ENST00000409175|MARCHF7	ENSG00000136536|ENST00000409175|MARCHF7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	559.793701171875	2	559.793652	1117.57275	0.45473	0.00025456	-0.77585	-0.00043432	-0.32111	-0.00017976	559.7931839880965	32.135	0.48248	32.129	31.805	32.287	-0.0061455					18	10	2	0	0	0	0.6396	1	1798	1798		39.873	0.62032	1	62188			56349	4117	37680	37695	63697	63697					0.01866734632653788
SVQPSSSLSAR	11	Unmodified	_SVQPSSSLSAR_					0	0	0		ENSG00000136536|ENST00000409175|MARCHF7	ENSG00000136536|ENST00000409175|MARCHF7	ENSG00000136536|ENST00000409175|MARCHF7	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	559.793652	1117.57275	0.11611	6.4997E-05	-0.3629	-0.00020315	-0.24679	-0.00013815	559.79331126822	32.279	0.43787	32.225	31.963	32.401	-0.05434	0.075379	-0.00039098	NaN	39.873	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57513			56350	4117	37680	37695							0.01866734632653788
SVQQLHNW	8	Unmodified	_SVQQLHNW_					0	0	0			REV__ENST00000498228.1_1_1:55014216-55050479:+|nuORF	REV__ENST00000498228.1_1_1:55014216-55050479:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.2537536621094	2	506.253966	1010.49338	-1.6382	-0.00082933	0.20971	0.00010617	-1.4285	-0.00072317	506.25395587471024	37.705	1.0151	37.705	37.395	38.41	0					69	24	5	0	0	0	0.884	1	2261	2261		33.516	1.5607	1	1276600	+		56351	27784	37681	37696	63698	63698					-0.011448675308315615
SVRIHEYAAIS	11	Unmodified	_SVRIHEYAAIS_					0	0	0		nc|ENSG00000166016|Q8N961-2|ABTB2;ENSG00000166016|ENST00000435224|ABTB2	nc|ENSG00000166016|Q8N961-2|ABTB2	nc|ENSG00000166016|Q8N961-2|ABTB2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.005859375	2	623.332944	1244.65134	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.325	1	77.46	76.96	77.96	0.13478								0	0	0	0.56276	1	7261	7261		36.447	3.6962	1				56352	6149	37682	37697	63699	63699					0.03879586937750901
SVRIHHKH	8	Unmodified	_SVRIHHKH_					0	0	0		nc|ENSG00000178104|Q5VU43-13|PDE4DIP	nc|ENSG00000178104|Q5VU43-13|PDE4DIP	nc|ENSG00000178104|Q5VU43-13|PDE4DIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.29052734375	2	507.291217	1012.56788	-0.96889	-0.00049151	-0.41944	-0.00021278	-1.3883	-0.00070429	507.2908682870928	29.69	1.0944	29.708	29.434	30.528	0.018192					39	24	3	0	0	0	0.90465	1	1893	1893		40.573	2.7611	1	375560			56353	15120	37683	37698	63700	63700					0.06209940071221354
SVRLGLCACSD	11	Unmodified	_SVRLGLCACSD_					0	0	0			REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.7605590820312	2	562.265358	1122.51616	-0.029997	-1.6866E-05	-3.3183	-0.0018657	-3.3482	-0.0018826	562.2632991836977	66.585	0.45908	66.613	66.41	66.869	0.02858					40	21	2	0	0	0	0.59499	1	6326	6326		45.022	7.2107	1	197390	+		56354	26013	37684	37699	63701	63701					-0.04019352519867425
SVRLGLCACSD	11	Unmodified	_SVRLGLCACSD_					0	0	0			REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	562.265358	1122.51616	-0.92028	-0.00051744	-2.2954	-0.0012906	-3.2156	-0.001808	562.2640719504268	66.757	0.52464	66.757	66.548	67.072	0	0.026004	0.00060231	NaN	45.022	44	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	167190	+		56355	26013	37684	37699							-0.04019352519867425
SVRLGLCACSD	11	Unmodified	_SVRLGLCACSD_					0	0	0			REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	562.265358	1122.51616	-1.2365	-0.00069526	-1.7083	-0.00096052	-2.9448	-0.0016558	562.2640781809597	66.76	0.54285	66.776	66.569	67.112	0.016205	0.045408	0.0012625	NaN	45.022	46	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162740	+		56356	26013	37684	37699							-0.04019352519867425
SVRLGLCACSD	11	Unmodified	_SVRLGLCACSD_					0	0	0			REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	562.265358	1122.51616	-0.15671	-8.8113E-05	-3.1889	-0.001793	-3.3456	-0.0018811	562.263583853785	66.647	0.57118	66.612	66.378	66.949	-0.035217	-0.11856	-0.00040253	NaN	45.022	38	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176100	+		56357	26013	37684	37699							-0.04019352519867425
SVRLGLCACSD	11	Unmodified	_SVRLGLCACSD_					0	0	0			REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	562.265358	1122.51616	-0.029997	-1.6866E-05	-3.3183	-0.0018657	-3.3482	-0.0018826	562.2632991836977	66.585	0.45908	66.613	66.41	66.869	0.02858	-0.11744	-0.00054797	NaN	45.022	40	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197390	+		56358	26013	37684	37699							-0.04019352519867425
SVRLGLCACSD	11	Unmodified	_SVRLGLCACSD_					0	0	0			REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	562.265358	1122.51616	0.35952	0.00020214	-3.5228	-0.0019807	-3.1633	-0.0017786	562.2633461357299	66.639	0.54427	66.772	66.517	67.062	0.13326	0.041528	-0.00077799	NaN	45.022	33	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134890	+		56359	26013	37684	37699							-0.04019352519867425
SVRLGLCACSD	11	Unmodified	_SVRLGLCACSD_					0	0	0			REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	562.265358	1122.51616	0.55574	0.00031247	-3.8634	-0.0021723	-3.3077	-0.0018598	562.263058662426	66.686	0.47548	66.813	66.527	67.002	0.12649	0.082334	-0.001161	NaN	45.022	41	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165540	+		56360	26013	37684	37699							-0.04019352519867425
SVRLGLCACSD	11	Unmodified	_SVRLGLCACSD_					0	0	0			REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	REV__ENST00000392038.6_1_19:40738535-40738706:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	562.265358	1122.51616	-0.65809	-0.00037002	-2.183	-0.0012275	-2.8411	-0.0015975	562.2639473245982	66.719	0.51427	66.771	66.571	67.085	0.052368	0.040724	0.0007286	NaN	45.022	35	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	182740	+		56361	26013	37684	37699							-0.04019352519867425
SVRNKLLES	9	Unmodified	_SVRNKLLES_					0	0	0		ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	ENSG00000204186|ENST00000374423|ZDBF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.30419921875	2	523.303655	1044.59276	1.2406	0.00064919	-1.1711	-0.00061286	0.069436	3.6336E-05	523.3029395587585	101.08	1.4079	101.12	100.73	102.14	0.044815					78	33	4	0	0	0	0.7932	1	10879	10879		26.693	1.1189	1	1032400			56362	8422	37685	37700	63702	63702					0.07224530363282611
SVRSIGIFYV	10	Unmodified	_SVRSIGIFYV_					0	0	0			REV__ENST00000497263.5_1_2:201742323-201747124:-|nuORF	REV__ENST00000497263.5_1_2:201742323-201747124:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.8241577148438	2	570.824224	1139.63389	0.51778	0.00029556	-0.34598	-0.0001975	0.1718	9.8065E-05	570.8238767890401	61.345	0.78047	61.464	61.349	62.129	0.11901					67	35	2	0	0	0	0.86718	1	5355	5355		27.882	2.7563	1	786490	+		56363	26341	37686	37701	63703	63703					0.06966291402750358
SVRVYFKK	8	Unmodified	_SVRVYFKK_					0	0	0		ENSG00000044524|ENST00000336596|EPHA3;nc|ENSG00000044524|P29320-2|EPHA3	ENSG00000044524|ENST00000336596|EPHA3	ENSG00000044524|ENST00000336596|EPHA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8094482421875	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.7961	1	4454	4454		17.365	0	1	771120			56364	949	37687	37702	63704	63704					0.0904234343945518
SVSARTTILL	10	Unmodified	_SVSARTTILL_					0	0	0		nc|ENSG00000151882|Q9NRJ3-2|CCL28	nc|ENSG00000151882|Q9NRJ3-2|CCL28	nc|ENSG00000151882|Q9NRJ3-2|CCL28	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8209838867188	2	530.821681	1059.62881	-0.88248	-0.00046844	-0.18223	-9.6732E-05	-1.0647	-0.00056517	530.821384723199	80.761	1.5978	80.761	80.141	81.738	0					159	57	4	0	0	0	0.8608	1	7496	7496		34.173	3.6689	1	2196600			56365	14992	37688	37703	63705	63705					0.10137987540133508
SVSAWTHIS	9	Unmodified	_SVSAWTHIS_					0	0	0			REV__ENST00000466352.5_3_1:2066409-2066779:+|nuORF	REV__ENST00000466352.5_3_1:2066409-2066779:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.2490234375	2	494.248349	986.482145	0.22534	0.00011137	-0.15132	-7.479E-05	0.074015	3.6582E-05	494.2481452855728	60.567	0.76367	60.534	60.174	60.938	-0.032509					55	21	4	0	0	0	0.47272	1	5697	5697		53.351	5.6941	1	1135100	+		56366	27127	37689	37704	63706	63706					-0.011636896249456186
SVSEEVLMAAV	11	Unmodified	_SVSEEVLMAAV_					0	0	0		ENST00000437289.1_1_10:2544043-2579735:+|nuORF	ENST00000437289.1_1_10:2544043-2579735:+|nuORF	ENST00000437289.1_1_10:2544043-2579735:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.7891845703125	2	567.789189	1133.56383	0.81867	0.00046483	-0.66432	-0.00037719	0.15436	8.7643E-05	567.7887124513766	80.272	0.67645	80.799	80.485	81.161	0.52676					43	15	4	0	0	0	0.29693	1	9254	9254		74.255	1.3758	1	650960			56367	11735	37690	37705	63707	63707					0.002386249519759076
SVSEEVLMAAV	11	Unmodified	_SVSEEVLMAAV_					0	0	0		ENST00000437289.1_1_10:2544043-2579735:+|nuORF	ENST00000437289.1_1_10:2544043-2579735:+|nuORF	ENST00000437289.1_1_10:2544043-2579735:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	567.789189	1133.56383	-0.080013	-4.543E-05	-0.1684	-9.5618E-05	-0.24842	-0.00014105	567.7889753228926	80.345	0.59111	80.764	80.467	81.058	0.41922	-0.01729	0.00021213	NaN	74.255	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	565140			56368	11735	37690	37705							0.002386249519759076
SVSEKKSL	8	Unmodified	_SVSEKKSL_					0	0	0			REV__ENSG00000055211|ENST00000367419|GINM1	REV__ENSG00000055211|ENST00000367419|GINM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.2523193359375	2	439.2531	876.491647	1.4468	0.0006355	-2.327	-0.0010222	-0.88026	-0.00038666	439.25208082203966	90.936	2.3215	90.869	90.307	92.629	-0.067093					98	55	4	0	0	0	0.81897	1	9542	9542		20.947	1.587	1	1599000	+		56369	16411	37691	37706	63708	63708					0.04846078660580133
SVSIEIKK	8	Unmodified	_SVSIEIKK_					0	0	0			REV__ENST00000473417.5_1_3:125188296-125239016:-|nuORF	REV__ENST00000473417.5_1_3:125188296-125239016:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.2776794433594	2	452.279118	902.543683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.35	1	54.324	53.824	54.824	-0.025955								0	0	0	0.29755	1	4898	4898		24.203	0	1		+		56370	18051	37692	37707	63709	63709					0.08851242074331367
SVSLSLVK	8	Unmodified	_SVSLSLVK_					0	0	0		ENSG00000148300|ENST00000371942|REXO4	ENSG00000148300|ENST00000371942|REXO4	ENSG00000148300|ENST00000371942|REXO4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.2290954589844	2	416.760561	831.506569	-0.1104	-4.6009E-05	1.5913	0.00066321	1.4809	0.0006172	416.7612876447501	38.869	0.3359	39.211	39.022	39.358	0.34187					13	7	2	0	0	0	0.4196	1	3212	3212		35.618	18.253	1	63898			56371	4945	37693	37708	63710	63710					0.08407570528561337
SVSLSLVK	8	Unmodified	_SVSLSLVK_					0	0	0		ENSG00000148300|ENST00000371942|REXO4	ENSG00000148300|ENST00000371942|REXO4	ENSG00000148300|ENST00000371942|REXO4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.2283630371094	2	416.760561	831.506569	-0.82116	-0.00034223	1.9936	0.00083084	1.1724	0.00048861	416.761311733935	38.725	0.54606	39.248	39.036	39.582	0.52235					19	12	2	0	0	0	0.4196	1	3215	3215		21.96	0	1	85539			56372	4945	37693	37708	63711	63711					0.08407570528561337
SVSLVLPVL	9	Unmodified	_SVSLVLPVL_					0	0	0			REV__ENST00000274311.2_1_5:52096140-52096299:+|nuORF	REV__ENST00000274311.2_1_5:52096140-52096299:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80035400390625	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	1	2859	2859		19.36	2.8868	1	489490	+		56373	24565	37694	37709	63712	63712					0.11905003113804469
SVSNLVTVF	9	Unmodified	_SVSNLVTVF_					0	0	0		ENST00000487975.5_1_6:36973566-36978850:+|nuORF;ENST00000459781.5_1_6:36973566-36979631:+|nuORF;ENST00000464083.5_1_6:36973566-36981682:+|nuORF;ENSG00000146192|ENST00000274963|FGD2	ENST00000487975.5_1_6:36973566-36978850:+|nuORF	ENST00000487975.5_1_6:36973566-36978850:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2686767578125	2	483.26875	964.522947	-0.79088	-0.00038221	1.1223	0.0005424	0.33147	0.00016019	483.269114465979	57.44	0.98806	57.834	57.411	58.399	0.39407					62	24	4	0	0	0	0.096131	1	5956	5956		93.195	2.4188	1	3790800			56374	4824	37695	37710	63713	63713					0.03926651694678185
SVSNLVTVF	9	Unmodified	_SVSNLVTVF_					0	0	0		ENST00000487975.5_1_6:36973566-36978850:+|nuORF;ENST00000459781.5_1_6:36973566-36979631:+|nuORF;ENST00000464083.5_1_6:36973566-36981682:+|nuORF;ENSG00000146192|ENST00000274963|FGD2	ENST00000487975.5_1_6:36973566-36978850:+|nuORF	ENST00000487975.5_1_6:36973566-36978850:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.268798828125	2	483.26875	964.522947	0.15939	7.7029E-05	0.10329	4.9919E-05	0.26269	0.00012695	483.2686398073137	57.331	1.4006	57.886	57.438	58.839	0.55512					68	34	4	0	0	0	0.059135	1	5971	5971		104.06	2.4561	1	3840500			56375	4824	37695	37710	63714	63714					0.03926651694678185
SVSNVVITK	9	Unmodified	_SVSNVVITK_					0	0	0		ENSG00000085832|ENST00000371733|EPS15;nc|ENSG00000085832|P42566-2|EPS15	ENSG00000085832|ENST00000371733|EPS15	ENSG00000085832|ENST00000371733|EPS15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.7821044921875	2	473.782025	945.549496	0.76185	0.00036095	-0.19655	-9.3122E-05	0.5653	0.00026783	473.7817677101334	35.068	1.0676	35.316	34.976	36.043	0.24769					87	27	4	0	0	0	0.0041213	2	2649	2633;2649		138.06	44.867	1	2207000			56376	1542	37696	37711	63715;63716	63716					0.07454340585991304
SVSNVVITK	9	Unmodified	_SVSNVVITK_					0	0	0		ENSG00000085832|ENST00000371733|EPS15;nc|ENSG00000085832|P42566-2|EPS15	ENSG00000085832|ENST00000371733|EPS15	ENSG00000085832|ENST00000371733|EPS15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.7818298339844	2	473.782025	945.549496	0.47806	0.00022649	0.062581	2.965E-05	0.54064	0.00025614	473.7818768654717	34.999	1.1766	35.38	35.136	36.313	0.3812					87	30	4	0	0	0	0.00044528	3	2655	2655;2673;2691		146.79	49.376	1	2189600			56377	1542	37696	37711	63717;63718;63719	63717					0.07454340585991304
SVSPPSPAPPL	11	Unmodified	_SVSPPSPAPPL_					0	0	0		ENST00000592416.1_1_18:48722264-48722681:-|nuORF	ENST00000592416.1_1_18:48722264-48722681:-|nuORF	ENST00000592416.1_1_18:48722264-48722681:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8268432617188	2	524.787307	1047.56006	-0.64153	-0.00033667	3.9742	0.0020856	3.3327	0.001749	525.2907422864794	99.411	0.45608	99.411	99.097	99.553	0					15	10	2	0	0	0	0.16498	1	10055	10055		51.335	14.889	1	104970			56378	14288	37697	37712	63720	63720					0.038183232404207956
SVSQKAKIK	9	Unmodified	_SVSQKAKIK_					0	0	0		L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|127|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|127|3|sense	L1MA4A_dup392|chr1:212054994-212060454:+|1.1882096334492105|0.0437562134210628|4.76|63.0|127|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.3102722167969	2	494.811116	987.60768	-0.073772	-3.6503E-05	3.3768	0.0016709	3.303	0.0016344	494.81248076616197	108.78	0.78468	108.73	108.35	109.14	-0.049324					63	32	2	0	0	0	0.7932	1	11872	11872		26.693	4.733	1	858000			56379	14558	37698	37713	63721	63721					0.11338022231279865
SVSTLKIQ	8	Unmodified	_SVSTLKIQ_					0	0	0		nc|ENSG00000253409|A0A1B0GX95|TRBV7-4;nc|ENSG00000211714|A0A075B6L6|TRBV7-3	nc|ENSG00000253409|A0A1B0GX95|TRBV7-4	nc|ENSG00000253409|A0A1B0GX95|TRBV7-4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2619934082031	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.84341	1	3035	3035		24.203	0	1	22029000			56380	15233	37699	37714	63722	63722					0.07010669040232642
SVSVCVGSLH	10	Unmodified	_SVSVCVGSLH_					0	0	0			REV__ENST00000262158.6_1_18:46446894-46447551:-|nuORF	REV__ENST00000262158.6_1_18:46446894-46447551:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.2482604980469	2	494.250034	986.485516	-2.4989	-0.0012351	-0.97538	-0.00048208	-3.4743	-0.0017172	494.249462831107	60.499	0.80064	60.53	60.177	60.977	0.0312					55	23	3	0	0	0	0.5766	2	5642	5610;5642		51.335	1.3109	1	1066900	+		56381	24409	37700	37715	63723;63724	63724					-0.008267628425983276
SVSVKISN	8	Unmodified	_SVSVKISN_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.239501953125	2	417.239993	832.465432	-1.799	-0.00075061	-0.033577	-1.401E-05	-1.8326	-0.00076462	417.2397355139431	88.204	2.4422	88.405	87.8	90.242	0.20115					131	57	3	0	0	0	0.86677	1	8732	8732		27.882	3.3631	1	1231700	+		56382	23147	37701	37716	63725	63725					0.042498094890902394
SVTDLIITL	9	Unmodified	_SVTDLIITL_					0	0	0		ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7734680175781	2	487.792058	973.569563	0.67118	0.0003274	-4.1752	-0.0020366	-3.504	-0.0017092	487.79029051015766	87.274	2.1017	87.424	87.121	89.222	0.14956					83	49	3	0	0	0	0.20789	1	8721	8721		53.351	14.545	1	242230			56383	1556	37702	37717	63726	63726					0.08172091525955238
SVTDLIITL	9	Unmodified	_SVTDLIITL_					0	0	0		ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	487.792058	973.569563	-1.0071	-0.00049123	-2.7707	-0.0013515	-3.7777	-0.0018428	487.7910978167732	87.498	1.5108	87.498	87.119	88.63	0	0.038541	0.00059925	NaN	53.351	62	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149100			56384	1556	37702	37717							0.08172091525955238
SVTDLIITL	9	Unmodified	_SVTDLIITL_					0	0	0		ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	ENSG00000086570|ENST00000261800|FAT2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	487.792058	973.569563	0.15423	7.5231E-05	-3.4764	-0.0016957	-3.3221	-0.0016205	487.7905860587109	87.106	0.74978	87.553	87.265	88.014	0.44628	0.093448	-8.9186E-05	NaN	53.351	36	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197580			56385	1556	37702	37717							0.08172091525955238
SVTFCGSH	8	Unmodified	_SVTFCGSH_					0	0	0			REV__ENST00000597095.5_1_19:19101856-19102289:-|nuORF	REV__ENST00000597095.5_1_19:19101856-19102289:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1842041015625	2	419.18162	836.348688	2.0844	0.00087374	2.1028	0.00088145	4.1872	0.0017552	419.1826528067583	100.01	2.1606	100.34	99.379	101.54	0.33294					130	55	5	0	0	0	0.90465	2	12120	12120;12132		40.573	5.3719	1	8540100	+		56386	29261	37703	37718	63727;63728	63727					-0.07603252002309091
SVTQTISH	8	Unmodified	_SVTQTISH_					0	0	0			REV__ENSG00000065526|ENST00000375759|SPEN	REV__ENSG00000065526|ENST00000375759|SPEN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.267822265625	2	436.727249	871.439946	0.28743	0.00012553	3.4723	0.0015165	3.7598	0.001642	436.728903034185	50.875	0.16319	50.925	50.831	50.994	0.0499					9	6	2	0	0	0	0.4196	1	4027	4027		17.365	0	1	88409	+		56387	16503	37704	37719	63729	63729					-0.0009166503333517539
SVTSPPKFI	9	Unmodified	_SVTSPPKFI_					0	0	0		ENST00000502497.5_1_4:81256922-81711597:+|nuORF	ENST00000502497.5_1_4:81256922-81711597:+|nuORF	ENST00000502497.5_1_4:81256922-81711597:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	488.2768249511719	2	488.279118	974.543683	-1.2485	-0.00060962	-1.735	-0.00084718	-2.9835	-0.0014568	488.2782313754991	17.157	0.44986	17.075	16.876	17.326	-0.0821					25	18	2	0	0	0	0.7932	1	220	220		24.203	1.1603	1	39575			56388	12855	37705	37720	63730	63730					0.055392420743373805
SVTTFLAK	8	Unmodified	_SVTTFLAK_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2	nc|ENSG00000163520|P98095|FBLN2	nc|ENSG00000163520|P98095|FBLN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.25494384765625	2	433.752736	865.490919	1.8242	0.00079126	2.5559	0.0011086	4.3801	0.0018999	433.754814527343	107.08	1.1998	107.18	106.73	107.93	0.10396					154	44	5	0	0	0	0.4196	1	13108	13108		42.396	10.441	1	103750000			56389	5814	37706	37721	63731	63731					0.05279284011510299
SVTTFLAK	8	Unmodified	_SVTTFLAK_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2	nc|ENSG00000163520|P98095|FBLN2	nc|ENSG00000163520|P98095|FBLN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.2552795410156	2	433.752736	865.490919	4.8089	0.0020859	-0.32611	-0.00014145	4.4828	0.0019444	433.75356514953563	107.01	1.1954	107.16	106.75	107.95	0.14929					149	44	5	0	0	0	0.4196	1	13105	13105		57.811	13.694	1	100860000			56390	5814	37706	37721	63732	63732					0.05279284011510299
SVVAKHLSG	9	Unmodified	_SVVAKHLSG_					0	0	0			REV__ENSG00000196189|ENST00000368285|SEMA4A	REV__ENSG00000196189|ENST00000368285|SEMA4A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2606506347656	2	449.261259	896.507966	0.49762	0.00022356	-1.9183	-0.00086184	-1.4207	-0.00063828	449.260034439117	72.458	0.67605	72.588	72.308	72.984	0.13063					46	23	3	0	0	0	0.7932	1	6651	6651		19.104	0.84144	1	180930	+		56391	23102	37707	37722	63733	63733					0.05557204617332445
SVVALRQLL	9	Unmodified	_SVVALRQLL_					0	0	0		ENSG00000141384|ENST00000269142|TAF4B;nc|ENSG00000141384|Q92750-2|TAF4B	ENSG00000141384|ENST00000269142|TAF4B	ENSG00000141384|ENST00000269142|TAF4B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.2762451171875	2	499.821484	997.628415	-1.1221	-0.00056084	-1.1027	-0.00055114	-2.2248	-0.001112	499.82077946516	44.125	0.33079	44.575	44.401	44.732	0.45025					10	7	2	0	0	0	0.20789	1	4035	4035		15.642	9.7207	1	213530			56392	4495	37708	37723	63734	63734					0.1295061261095043
SVVFIKNRLY	10	Unmodified	_SVVFIKNRLY_					0	0	0		ENSG00000124802|ENST00000379715|EEF1E1	ENSG00000124802|ENST00000379715|EEF1E1	ENSG00000124802|ENST00000379715|EEF1E1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.870361328125	2	619.866423	1237.71829	1.2588	0.00078029	3.961	0.0024553	5.2198	0.0032356	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.8651	1	11734	11734		25.574	4.7369	1	4742500			56393	3364	37709	37724	63735	63735					0.10894242219501393
SVVFIKNRLY	10	Unmodified	_SVVFIKNRLY_					0	0	0		ENSG00000124802|ENST00000379715|EEF1E1	ENSG00000124802|ENST00000379715|EEF1E1	ENSG00000124802|ENST00000379715|EEF1E1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8697509765625	2	619.866423	1237.71829	4.6432	0.0028781	0.11372	7.0493E-05	4.7569	0.0029486	619.8662722142382	105.81	1.0194	106	105.44	106.46	0.18647					62	31	3	0	0	0	0.8651	1	12949	12949		25.574	0	1	193730			56394	3364	37709	37724	63736	63736					0.10894242219501393
SVVKMTQLI	9	Unmodified	_SVVKMTQLI_					0	0	0		ENST00000464104.5_1_9:98997744-99012284:-|nuORF;nc|ENSG00000130948|P37058-2|HSD17B3;ENSG00000130948|ENST00000375263|HSD17B3	ENST00000464104.5_1_9:98997744-99012284:-|nuORF	ENST00000464104.5_1_9:98997744-99012284:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8036193847656	2	509.801903	1017.58925	-0.38177	-0.00019462	3.8836	0.0019799	3.5019	0.0017853	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.78983	1	8305	8305		27.882	1.0861	1	948010			56395	3699	37710	37725	63737	63737					0.08116144265068215
SVVKVKKFN	9	Unmodified	_SVVKVKKFN_					0	0	0		nc|ENSG00000100722|Q6PJT7-9|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;nc|ENSG00000100722|Q6PJT7-11|ZC3H14;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;nc|ENSG00000100722|Q6PJT7-10|ZC3H14;nc|ENSG00000100722|Q6PJT7-3|ZC3H14	nc|ENSG00000100722|Q6PJT7-9|ZC3H14	nc|ENSG00000100722|Q6PJT7-9|ZC3H14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.82763671875	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.78536	1	10194	10194		29.15	1.2673	1	15330000			56396	1862	37711	37726	63738	63738					0.12214899127980061
SVVMACSLI	9	Unmodified	_SVVMACSLI_					0	0	0		ENST00000481038.5_1_20:5559042-5559150:-|nuORF	ENST00000481038.5_1_20:5559042-5559150:-|nuORF	ENST00000481038.5_1_20:5559042-5559150:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.7412414550781	2	461.740457	921.46636	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.578	1	20.557	20.057	21.057	-0.020922								0	0	0	0.30416	1	503	503		29.15	2.3535	1				56397	12451	37712	37727	63739	63739					0.0024856454213022516
SVVQCGSW	8	Unmodified	_SVVQCGSW_					0	0	0			REV__ENSG00000167619|ENST00000301204|TMEM145	REV__ENSG00000167619|ENST00000301204|TMEM145	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2467041015625	2	433.19727	864.379988	1.4216	0.00061582	3.6978	0.0016019	5.1194	0.0022177	433.1987919744526	98.285	0.81633	98.67	98.423	99.24	0.38548					29	19	3	0	0	0	0.4196	1	11832	11832		37.159	5.2042	1	159970	+		56398	21406	37713	37728	63740	63740					-0.05762678968221735
SVVTIVVIP	9	Unmodified	_SVVTIVVIP_					0	0	0		ENST00000537699.1_1_12:10603035-10603776:-|nuORF;nc|ENSG00000134545|P26715-2|KLRC1;ENSG00000134545|ENST00000359151|KLRC1	ENST00000537699.1_1_12:10603035-10603776:-|nuORF	ENST00000537699.1_1_12:10603035-10603776:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8002624511719	2	463.799686	925.584819	0.23374	0.00010841	1.7317	0.00080317	1.9655	0.00091158	463.8003055874184	41.421	1.4891	41.495	41.009	42.498	0.073418					84	40	3	0	0	0	0.7932	1	2789	2789		13.775	2.2643	1	378670			56399	3942	37714	37729	63741	63741					0.11905003113804469
SVVTIVVIP	9	Unmodified	_SVVTIVVIP_					0	0	0		ENST00000537699.1_1_12:10603035-10603776:-|nuORF;nc|ENSG00000134545|P26715-2|KLRC1;ENSG00000134545|ENST00000359151|KLRC1	ENST00000537699.1_1_12:10603035-10603776:-|nuORF	ENST00000537699.1_1_12:10603035-10603776:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.7998046875	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	3010	3010		13.775	0	1	1231300			56400	3942	37714	37729	63742	63742					0.11905003113804469
SVVVVYSS	8	Unmodified	_SVVVVYSS_					0	0	0			REV__ENSG00000111252|ENST00000341259|SH2B3	REV__ENSG00000111252|ENST00000341259|SH2B3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2279052734375	2	420.229094	838.443634	-1.3082	-0.00054975	-1.524	-0.00064043	-2.8322	-0.0011902	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.86288	1	7533	7533		26.796	6.3143	1	419890	+		56401	17855	37715	37730	63743	63743					0.017950047405292935
SVWKLSALTR	10	Unmodified	_SVWKLSALTR_					0	0	0		ENST00000344423.9_1_8:28205359-28205527:-|nuORF	ENST00000344423.9_1_8:28205359-28205527:-|nuORF	ENST00000344423.9_1_8:28205359-28205527:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.8395385742188	2	580.842948	1159.67134	-0.90693	-0.00052678	-3.2677	-0.001898	-4.1746	-0.0024248	580.8407767096548	69.755	0.8518	69.79	69.548	70.399	0.035622					124	41	4	0	0	0	0.86698	1	6669	6669		28.081	6.1216	1	14836000			56402	10293	37716	37731	63744	63744					0.097893826683503
SVWSTLLNQ	9	Unmodified	_SVWSTLLNQ_					0	0	0		chr4:72138139-72146978|25|48.24|0.41|6.87|+|2|NPFFR2,NPFFR2|3	chr4:72138139-72146978|25|48.24|0.41|6.87|+|2|NPFFR2,NPFFR2|3	chr4:72138139-72146978|25|48.24|0.41|6.87|+|2|NPFFR2,NPFFR2|3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2772216796875	2	524.277106	1046.53966	2.7827	0.0014589	-3.2687	-0.0017137	-0.48603	-0.00025482	524.2754281662812	25.682	3.5829	25.251	24.138	27.721	-0.4311					230	81	7	0	0	0	0.55097	1	1459	1459		49.442	3.4896	1	23207000			56403	431	37717	37732	63745	63745					0.01825152580613576
SVYPEKLATKF	11	Unmodified	_SVYPEKLATKF_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3626098632812	2	641.855721	1281.69689	1.7061	0.001095	4.3829	0.0028132	6.089	0.0039082	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.48313	5	12527	12482;12527;12587;12779;13173		53.089	8.7118	1	27133000			56404	4137	37718	37733	63746;63747;63748;63749;63750	63747					0.06730812400110153
SVYPEKLATKF	11	Unmodified	_SVYPEKLATKF_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3623046875	2	641.855721	1281.69689	7.1333	0.0045786	3.5472	0.0022768	10.681	0.0068554	642.3587393557684	111.56	0.41818	111.6	111.28	111.7	0.032707					29	15	2	0	0	0	0.53361	2	13521	13521;13535		49.536	8.7579	1	6618000			56405	4137	37718	37733	63751;63752	63751					0.06730812400110153
SVYSDFLLYK	10	Unmodified	_SVYSDFLLYK_					0	0	0		ENSG00000164733|ENST00000353047|CTSB	ENSG00000164733|ENST00000353047|CTSB	ENSG00000164733|ENST00000353047|CTSB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	617.8206787109375	2	617.821347	1233.62814	0.31422	0.00019413	-0.25127	-0.00015524	0.062952	3.8893E-05	617.8210253327046	75.535	0.53761	75.93	75.658	76.196	0.39507					30	12	4	0	0	0	0.85981	1	8551	8551		35.152	4.8343	1	325170			56406	5996	37719	37734	63753	63753					0.020671481004455927
SVYVYKVLK	9	Unmodified	_SVYVYKVLK_					0	0	0		chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15;chr6:27841661-27852109|62|16.63|0.85|4.28|+|ENST00000606613|H2BC15,H2BC15;ENSG00000203814|ENST00000369167|H2BC18;nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000233822|ENST00000612898|H2BC15;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15;ENSG00000197903|ENST00000356950|H2BC12	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.830810546875	2	549.831517	1097.64848	-1.8841	-0.0010359	0.84421	0.00046418	-1.0399	-0.00057174	549.8318502842114	43.044	0.97987	43.477	43.006	43.986	0.4334					53	23	4	0	0	0	0.01944	3	3865	3853;3865;3878		125.81	79.862	1	3183100			56407	473;8212	37720	37735	63754;63755;63756	63755					0.10356363550886272
SVYVYKVLK	9	Unmodified	_SVYVYKVLK_					0	0	0		chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15;chr6:27841661-27852109|62|16.63|0.85|4.28|+|ENST00000606613|H2BC15,H2BC15;ENSG00000203814|ENST00000369167|H2BC18;nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000233822|ENST00000612898|H2BC15;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000234289|ENST00000599962|H2BC12L	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15;ENSG00000197903|ENST00000356950|H2BC12	chr6:27839038-27841564|61|15.9|0.83|4.26|+|ENST00000606613|H2BC15,H2BC15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.8304443359375	2	549.831517	1097.64848	-1.9638	-0.0010798	1.0677	0.00058704	-0.89612	-0.00049272	549.8319950091462	42.816	0.7701	43.513	43.257	44.027	0.69754					47	18	4	0	0	0	0.051853	4	3847	3836;3847;3859;3875		107.01	61.056	1	3087700			56408	473;8212	37720	37735	63757;63758;63759;63760	63758					0.10356363550886272
SVYYNEATGGK	11	Unmodified	_SVYYNEATGGK_					0	0	0		ENSG00000196230|ENST00000327892|TUBB	ENSG00000196230|ENST00000327892|TUBB	ENSG00000196230|ENST00000327892|TUBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.7799682617188	2	594.78021	1187.54587	0.63174	0.00037575	-0.75238	-0.0004475	-0.12064	-7.1753E-05	594.7796487925674	34.389	0.61836	34.6	34.359	34.978	0.21002					39	14	4	0	0	0	0.098554	3	2546	2537;2546;2559		93.442	33.1	1	1526100			56409	8029	37721	37736	63761;63762;63763	63762					-0.04040373978523348
SVYYNEATGGK	11	Unmodified	_SVYYNEATGGK_					0	0	0		ENSG00000196230|ENST00000327892|TUBB	ENSG00000196230|ENST00000327892|TUBB	ENSG00000196230|ENST00000327892|TUBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.7801513671875	2	594.78021	1187.54587	1.0853	0.0006455	-1.0607	-0.00063088	0.024575	1.4617E-05	594.7794393396288	34.366	0.86031	34.671	34.2	35.06	0.30495					44	20	4	0	0	0	0.00076576	3	2563	2552;2563;2575		123.11	64.33	1	1843000			56410	8029	37721	37736	63764;63765;63766	63765					-0.04040373978523348
SWGALPKRVS	10	Unmodified	_SWGALPKRVS_					0	0	0			REV__ENST00000610160.1_1_20:31291624-31315937:-|nuORF	REV__ENST00000610160.1_1_20:31291624-31315937:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	550.8148193359375	2	550.81419	1099.61383	0.12602	6.9412E-05	-1.8048	-0.00099409	-1.6788	-0.00092468	550.8131206656723	43.691	0.61175	43.639	43.35	43.962	-0.052517					22	14	2	0	0	0	0.86348	1	3022	3022		31.53	1.2121	1	263220	+		56411	29426	37722	37737	63767	63767					0.06800540462791105
SWIPCSCLSY	10	Unmodified	_SWIPCSCLSY_					0	0	0			REV__nc|ENSG00000007202|Q14667-4|BLTP2	REV__nc|ENSG00000007202|Q14667-4|BLTP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.7529907226562	2	579.751553	1157.48855	0.37514	0.00021749	2.8511	0.001653	3.2263	0.0018704	579.7531276961427	78.292	0.83783	78.239	77.877	78.715	-0.053558					78	25	4	0	0	0	0.3985	1	7807	7807		64.207	0.901	1	568320	+		56412	29007	37723	37738	63768	63768					-0.08389255780093663
SWIPCSCLSY	10	Unmodified	_SWIPCSCLSY_					0	0	0			REV__nc|ENSG00000007202|Q14667-4|BLTP2	REV__nc|ENSG00000007202|Q14667-4|BLTP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.7543334960938	2	579.751553	1157.48855	-0.27608	-0.00016005	3.4427	0.0019959	3.1666	0.0018359	579.7534821789302	78.131	0.87527	78.181	77.655	78.53	0.04969					85	32	4	0	0	0	0.43769	1	7701	7701		60.972	5.4677	1	547020	+		56413	29007	37723	37738	63769	63769					-0.08389255780093663
SWKFNMNDLRR	11	Unmodified	_SWKFNMNDLRR_					0	0	0			REV__nc|ENSG00000198947|P11532-4|DMD	REV__nc|ENSG00000198947|P11532-4|DMD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.5823974609375	3	489.582227	1465.72485	-0.5107	-0.00025003	0.048142	2.3569E-05	-0.46255	-0.00022646	489.58222289541936	67.723	0.63507	67.687	67.36	67.995	-0.035698					59	24	3	0	0	0	0.74771	1	6489	6489		22.562	1.5294	1	201420	+		56414	23425	37724	37739	63770	63770					0.010618121085599341
SWKFNMNDLRR	11	Unmodified	_SWKFNMNDLRR_					0	0	0			REV__nc|ENSG00000198947|P11532-4|DMD	REV__nc|ENSG00000198947|P11532-4|DMD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.5811462402344	3	489.582227	1465.72485	-0.92804	-0.00045435	0.62713	0.00030703	-0.30091	-0.00014732	489.5824831322865	67.665	0.74184	67.724	67.383	68.125	0.059288					65	27	3	0	0	0	0.69071	1	6028	6028		33.039	3.4886	1	262200	+		56415	23425	37724	37739	63771	63771					0.010618121085599341
SWLGFEIL	8	Unmodified	_SWLGFEIL_					0	0	0		nc|ENSG00000197448|Q9Y2Q3-4|GSTK1;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;ENSG00000197448|ENST00000358406|GSTK1;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;ENST00000489654.1_1_7:142960606-142961286:+|nuORF;ENST00000473649.1_1_7:142960606-142961786:+|nuORF	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.75775146484375	2	482.760561	963.506569	-1.3341	-0.00064404	-2.7191	-0.0013127	-4.0531	-0.0019567	482.75905253542953	46.526	0.72075	47.449	47.151	47.871	0.92315					29	16	2	0	0	0	0.93529	1	4418	4418		52.299	2.2746	1	1954600			56416	8166	37725	37740	63772	63772					0.023355705285666772
SWLLPLQS	8	Unmodified	_SWLLPLQS_					0	0	0		ENST00000417901.5_1_3:49155182-49156664:-|nuORF	ENST00000417901.5_1_3:49155182-49156664:-|nuORF	ENST00000417901.5_1_3:49155182-49156664:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.2598571777344	2	472.26601	942.517468	-0.32609	-0.000154	0.042103	1.9884E-05	-0.28399	-0.00013412	472.2660738876336	21.653	0.34171	21.596	21.459	21.8	-0.057201					20	12	2	0	0	0	0.4196	1	612	612		18.324	0	1	24436			56417	11416	37726	37741	63773	63773					0.04390972902854173
SWLLPLQS	8	Unmodified	_SWLLPLQS_					0	0	0		ENST00000417901.5_1_3:49155182-49156664:-|nuORF	ENST00000417901.5_1_3:49155182-49156664:-|nuORF	ENST00000417901.5_1_3:49155182-49156664:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	472.26601	942.517468	0.86141	0.00040682	-0.36803	-0.00017381	0.49338	0.00023301	472.2656583158308	21.34	0.40761	21.408	21.23	21.638	0.068251	-0.14185	-0.00039731	NaN	18.324	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21381			56418	11416	37726	37741							0.04390972902854173
SWLLPLQS	8	Unmodified	_SWLLPLQS_					0	0	0		ENST00000417901.5_1_3:49155182-49156664:-|nuORF	ENST00000417901.5_1_3:49155182-49156664:-|nuORF	ENST00000417901.5_1_3:49155182-49156664:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	472.26601	942.517468	-0.30394	-0.00014354	0.3887	0.00018357	0.08476	4.0029E-05	472.266087082351	21.71	0.34732	21.645	21.493	21.84	-0.064743	0.095496	0.00031745	NaN	18.324	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26440			56419	11416	37726	37741							0.04390972902854173
SWLPILLNERL	11	Unmodified	_SWLPILLNERL_					0	0	0		nc|ENSG00000107099|Q8NF50-4|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;ENSG00000107099|ENST00000432829|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.93310546875	3	451.934484	1352.78162	-1.2099	-0.00054677	-2.7663	-0.0012502	-3.9762	-0.001797	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.75121	1	10436	10436		21.78	1.4654	1	1176100			56420	2330	37727	37742	63774	63774					0.1193418293673858
SWPKIKGK	8	Unmodified	_SWPKIKGK_					0	0	0			REV__ENST00000563581.1_1_16:34641293-34641696:-|nuORF	REV__ENST00000563581.1_1_16:34641293-34641696:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28765869140625	2	472.28982	942.565087	-1.7052	-0.00080534	-2.46	-0.0011618	-4.1652	-0.0019672	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.82464	1	12383	12383		21.702	0.7554	1	3080300	+		56421	28820	37728	37743	63775	63775					0.0915067189371257
SWPSPKNRSR	10	Unmodified	_SWPSPKNRSR_					0	0	0		ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	ENSG00000204469|ENST00000376033|PRRC2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.5526428222656	3	405.551144	1213.6316	0.59269	0.00024037	2.8716	0.0011646	3.4643	0.001405	405.5523269463935	28.869	3.2114	28.696	27.713	30.924	-0.17336					183	75	5	0	0	0	0.67571	1	1766	1766		35.178	5.6275	1	9724600			56422	8446	37729	37744	63776	63776					0.03333255717643624
SWRQRPSVRLL	11	Unmodified	_SWRQRPSVRLL_					0	0	0			REV__ENST00000380701.7_1_9:15784633-15846724:+|nuORF	REV__ENST00000380701.7_1_9:15784633-15846724:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.6080322265625	3	466.608993	1396.80515	-0.1162	-5.4221E-05	-1.9759	-0.00092196	-2.0921	-0.00097618	466.608028235663	100.63	2.2402	100.66	99.377	101.62	0.031036					154	52	4	0	0	0	0.74771	1	10680	10680		22.562	3.2989	1	499520	+		56423	25951	37730	37745	63777	63777					0.12262041493931974
SWRRPWWTQP	10	Unmodified	_SWRRPWWTQP_					0	0	0			REV__ENST00000599373.5_1_19:19030550-19032753:+|nuORF	REV__ENST00000599373.5_1_19:19030550-19032753:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7531433105469	3	467.238789	1398.69454	0.0043469	2.031E-06	0.49303	0.00023036	0.49738	0.00023239	467.573061081556	50.075	0.37553	50.523	50.348	50.724	0.44761					13	8	2	0	0	0	0.37624	1	4886	4886		11.097	4.4371	1	123600	+		56424	29297	37731	37746	63778	63778					0.011138215056917034
SWSIDLAIATQ	11	Unmodified	_SWSIDLAIATQ_					0	0	0			REV__nc|ENSG00000174442|Q9H900-2|ZWILCH	REV__nc|ENSG00000174442|Q9H900-2|ZWILCH	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.21234130859375	3	402.211794	1203.61355	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.802	1	66.935	66.435	67.435	0.13326								0	0	0	0.56276	1	5939	5939		25.892	0	1		+		56425	21992	37732	37747	63779	63779					0.01989075952269559
SWTERPLLP	9	Unmodified	_SWTERPLLP_					0	0	0			REV__ENST00000532840.5_1_11:46958356-47159359:+|nuORF	REV__ENST00000532840.5_1_11:46958356-47159359:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3382568359375	2	549.800749	1097.58694	0.23425	0.00012879	-4.1182	-0.0022642	-3.884	-0.0021354	549.7988448411214	16.361	0.13802	15.763	15.648	15.786	-0.59873					4	2	2	0	0	0	0.20789	1	118	118		40.573	14.999	1	21874	+		56426	28333	37733	37748	63780	63780					0.04205431851596586
SWTERPLLP	9	Unmodified	_SWTERPLLP_					0	0	0			REV__ENST00000532840.5_1_11:46958356-47159359:+|nuORF	REV__ENST00000532840.5_1_11:46958356-47159359:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	549.800749	1097.58694	0.31632	0.00017391	-2.2248	-0.0012232	-1.9085	-0.0010493	549.7985029601668	16.219	0.11027	16.139	16.058	16.169	-0.080017	0.18792	0.0010662	NaN	40.573	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12920	+		56427	28333	37733	37748							0.04205431851596586
SYAGILLGI	9	Unmodified	_SYAGILLGI_					0	0	0		ENSG00000119899|ENST00000355773|SLC17A5	ENSG00000119899|ENST00000355773|SLC17A5	ENSG00000119899|ENST00000355773|SLC17A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.765625	2	453.768386	905.522219	-1.2895	-0.00058512	-3.8536	-0.0017487	-5.1431	-0.0023338	453.7664319671317	42.031	1.3122	42.035	41.619	42.931	0.0043983					83	36	3	0	0	0	0.7932	1	2747	2747		26.796	6.3143	1	708440			56428	3101	37734	37749	63781	63781					0.06567857045604342
SYAPTLVI	8	Unmodified	_SYAPTLVI_					0	0	0			REV__ENSG00000183549|ENST00000331849|ACSM5	REV__ENSG00000183549|ENST00000331849|ACSM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.2462158203125	2	432.247286	862.48002	0.71048	0.0003071	-1.3937	-0.00060241	-0.68319	-0.00029531	432.2467662501791	97.978	1.1971	98.139	97.71	98.908	0.16073					69	26	4	0	0	0	0.88915	1	10137	10137		35.201	6.0512	1	628050	+		56429	22613	37735	37750	63782	63782					0.04327881637232167
SYCCCCCDQSA	11	Unmodified	_SYCCCCCDQSA_					0	0	0			REV__ENST00000373053.7_2_10:74647032-74647206:+|nuORF	REV__ENST00000373053.7_2_10:74647032-74647206:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.1581420898438	2	593.16053	1184.30651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.951	1	59.952	59.452	60.452	0.00051117								0	0	0	0.56276	1	5170	5170		5.2201	0.31441	1		+		56430	25744	37736	37751	63783	63783					-0.2782742285119184
SYCMEDIH	8	Unmodified	_SYCMEDIH_					0	0	0		nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3;ENSG00000139508|ENST00000266943|SLC46A3;nc|ENSG00000139508|Q7Z3Q1-2|SLC46A3	nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3	nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.19329833984375	2	499.191328	996.368103	0.63603	0.0003175	2.7361	0.0013659	3.3722	0.0016834	499.1926971051662	95.97	0.73779	96.375	96.012	96.75	0.40451					55	17	4	0	0	0	0.89457	1	11559	11559		37.028	6.5248	1	1507600			56431	4373	37737	37752	63784	63784					-0.13022663773722343
SYCNHHNDEY	10	Unmodified	_SYCNHHNDEY_					0	0	0			REV__ENSG00000225526|ENST00000564146|MKRN2OS	REV__ENSG00000225526|ENST00000564146|MKRN2OS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3602294921875	2	641.233101	1280.45165	1.5914	0.0010205	3.0566	0.00196	4.6481	0.0029805	641.2349121766067	99.707	0.52196	100.04	99.77	100.29	0.33294					19	12	2	0	0	0	0.37624	1	12014	12014		25.574	0	1	189880	+		56432	23738	37738	37753	63785	63785					-0.17735836072301936
SYDHVELTF	9	Unmodified	_SYDHVELTF_					0	0	0		nc|ENSG00000132471|Q969T9-2|WBP2;ENSG00000132471|ENST00000254806|WBP2;ENST00000592802.1_1_17:73847561-73851408:-|nuORF;ENST00000589834.1_1_17:73845679-73851408:-|nuORF;ENST00000590450.5_1_17:73845072-73851378:-|nuORF;ENST00000589241.5_1_17:73844624-73851319:-|nuORF;ENST00000587642.5_1_17:73844624-73847864:-|nuORF;ENST00000416574.6_1_17:73843478-73851408:-|nuORF	nc|ENSG00000132471|Q969T9-2|WBP2	nc|ENSG00000132471|Q969T9-2|WBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.7586059570312	2	555.758746	1109.50294	-0.258	-0.00014338	0.28156	0.00015648	0.023561	1.3094E-05	555.7587306832964	64.434	1.0399	64.821	64.396	65.435	0.3868					62	24	4	0	0	0	0.19953	2	6966	6966;6979		73.975	13.843	1	798640			56433	3799	37739	37754	63786;63787	63786					-0.04743144035955993
SYDHVELTF	9	Unmodified	_SYDHVELTF_					0	0	0		nc|ENSG00000132471|Q969T9-2|WBP2;ENSG00000132471|ENST00000254806|WBP2;ENST00000592802.1_1_17:73847561-73851408:-|nuORF;ENST00000589834.1_1_17:73845679-73851408:-|nuORF;ENST00000590450.5_1_17:73845072-73851378:-|nuORF;ENST00000589241.5_1_17:73844624-73851319:-|nuORF;ENST00000587642.5_1_17:73844624-73847864:-|nuORF;ENST00000416574.6_1_17:73843478-73851408:-|nuORF	nc|ENSG00000132471|Q969T9-2|WBP2	nc|ENSG00000132471|Q969T9-2|WBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.7588500976562	2	555.758746	1109.50294	0.054838	3.0477E-05	-0.048419	-2.6909E-05	0.0064183	3.567E-06	555.7586137373056	64.35	0.80875	64.904	64.561	65.37	0.55386					58	19	4	0	0	0	0.31972	1	6981	6981		63.306	2.3343	1	870100			56434	3799	37739	37754	63788	63788					-0.04743144035955993
SYDLANRDF	9	Unmodified	_SYDLANRDF_					0	0	0		nc|ENSG00000100697|Q9UPY3-2|DICER1;ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-3|DICER1	nc|ENSG00000100697|Q9UPY3-2|DICER1	nc|ENSG00000100697|Q9UPY3-2|DICER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.7536010742188	2	550.753995	1099.49344	-0.76249	-0.00041994	0.6042	0.00033277	-0.15828	-8.7175E-05	550.754236289613	51.847	0.5443	52.278	51.944	52.488	0.43063					21	12	2	0	0	0	0.034797	3	5167	5157;5167;5181		115.49	37.628	1	1299600			56435	14817	37740	37755	63789;63790;63791	63790					-0.052329123214803985
SYDLANRDF	9	Unmodified	_SYDLANRDF_					0	0	0		nc|ENSG00000100697|Q9UPY3-2|DICER1;ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-3|DICER1	nc|ENSG00000100697|Q9UPY3-2|DICER1	nc|ENSG00000100697|Q9UPY3-2|DICER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.7531127929688	2	550.753995	1099.49344	0.44039	0.00024255	-0.67852	-0.0003737	-0.23813	-0.00013115	550.7535206365958	51.597	0.53796	52.264	51.979	52.517	0.6673					28	12	3	0	0	0	0.017216	3	5150	5141;5150;5163		127.46	35.572	1	1478300			56436	14817	37740	37755	63792;63793;63794	63793					-0.052329123214803985
SYERLALLVDT	11	Unmodified	_SYERLALLVDT_					0	0	0		ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3463745117188	2	640.34826	1278.68197	1.5878	0.0010167	-4.1008	-0.0026259	-2.513	-0.0016092	640.3455184855359	102.86	0.59948	103.05	102.76	103.36	0.18297					44	14	4	0	0	0	0.65746	1	10843	10843		37.812	0	1	4444300			56437	2126	37741	37756	63795	63795					0.05377320532124941
SYFITIMMR	9	Unmodified	_SYFITIMMR_					0	0	0			REV__ENST00000302386.9_1_17:7145932-7146088:-|nuORF	REV__ENST00000302386.9_1_17:7145932-7146088:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.7955932617188	2	581.293388	1160.57222	0.66003	0.00038367	-0.13328	-7.7474E-05	0.52675	0.0003062	581.2920313686129	36.705	0.74496	37.191	36.874	37.619	0.48581					58	17	5	0	0	0	0.78536	1	2932	2932		29.15	1.2673	1	679340	+		56438	24782	37742	37757	63796	63796					-0.001640996124024241
SYFSLSTSLP	10	Unmodified	_SYFSLSTSLP_					0	0	0		ENST00000369784.7_1_1:110881509-110881560:+|nuORF	ENST00000369784.7_1_1:110881509-110881560:+|nuORF	ENST00000369784.7_1_1:110881509-110881560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.7802124023438	2	551.276772	1100.53899	-0.071144	-3.922E-05	-2.406	-0.0013264	-2.4772	-0.0013656	551.2753010246721	26.996	0.99519	27.037	26.738	27.733	0.040834					84	31	4	0	0	0	0.86718	1	1232	1232		27.882	2.4321	1	517830			56439	10626	37743	37758	63797	63797					-0.0072568685909573105
SYGKEAAKAS	10	Unmodified	_SYGKEAAKAS_					0	0	0			REV__nc|ENSG00000147081|Q5JQC9-2|AKAP4	REV__nc|ENSG00000147081|Q5JQC9-2|AKAP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.259033203125	2	506.258914	1010.50327	1.0379	0.00052544	-0.92649	-0.00046904	0.11141	5.6401E-05	506.2583142247228	19.481	0.69756	19.554	19.295	19.992	0.073465					64	24	4	0	0	0	0.42393	1	421	421		62.107	1.1355	1	424400	+		56440	20048	37744	37759	63798	63798					-0.0015572431610735293
SYGVYYIKE	9	Unmodified	_SYGVYYIKE_					0	0	0			REV__nc|ENSG00000173239|Q5VYY2-2|LIPM	REV__nc|ENSG00000173239|Q5VYY2-2|LIPM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3054809570312	2	561.279315	1120.54408	1.7449	0.00097938	-1.4598	-0.00081935	0.28511	0.00016003	561.2784021143568	27.354	0.64517	27.1	26.723	27.368	-0.25465					26	14	2	0	0	0	0.20789	1	1586	1586		32.812	3.6629	1	165920	+		56441	21906	37745	37760	63799	63799					-0.011373829964895776
SYGVYYIKE	9	Unmodified	_SYGVYYIKE_					0	0	0			REV__nc|ENSG00000173239|Q5VYY2-2|LIPM	REV__nc|ENSG00000173239|Q5VYY2-2|LIPM	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	561.279315	1120.54408	0.1293	7.2576E-05	0.076378	4.2869E-05	0.20568	0.00011544	561.279506655727	27.249	0.74842	27.073	26.792	27.54	-0.17559	-0.013204	0.00075474	NaN	32.812	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99338	+		56442	21906	37745	37760							-0.011373829964895776
SYHRRRQR	8	Unmodified	_SYHRRRQR_					0	0	0			REV__ENST00000465930.1_1_2:98744784-98750261:+|nuORF	REV__ENST00000465930.1_1_2:98744784-98750261:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.7899780273438	2	579.821204	1157.62786	-0.36573	-0.00021206	3.9278	0.0022774	3.562	0.0020653	579.8237694575776	19.85	0.37871	19.38	19.065	19.444	-0.46967					12	7	2	0	0	0	0.4196	1	560	560		27.882	0	1	51606	+		56443	27117	37746	37761	63800	63800					0.05534630734473467
SYHSKTALR	9	Unmodified	_SYHSKTALR_					0	0	0			REV__ENSG00000166262|ENST00000299338|FAM227B	REV__ENSG00000166262|ENST00000299338|FAM227B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8101196289062	2	531.788173	1061.56179	1.8306	0.00097347	0.8013	0.00042612	2.6319	0.0013996	531.7884991917169	96.988	0.73026	97.393	97.095	97.826	0.40498					41	17	3	0	0	0	0.20789	1	11702	11702		68.787	18.762	1	479670	+		56444	21272	37747	37762	63801	63801					0.03347377049021816
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.7921752929688	2	575.792589	1149.57063	-0.64596	-0.00037194	0.7712	0.00044405	0.12525	7.2115E-05	575.7928857292213	80.641	0.79634	80.641	80.366	81.162	0					66	25	4	0	0	0	9.9902E-05	6	7464	7436;7445;7454;7464;7471;7481		147.69	38.922	1	563560			56445	5727	37748	37763	63802;63803;63804;63805;63806;63807	63805					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.7928466796875	2	575.792589	1149.57063	-1.0005	-0.00057606	1.1435	0.0006584	0.143	8.2339E-05	575.793143897301	80.562	0.6579	80.624	80.351	81.009	0.062225					43	17	3	0	0	0	0.041233	5	7897	7876;7887;7897;7910;7921		111.65	45.845	1	401180			56446	5727	37748	37763	63808;63809;63810;63811;63812	63810					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.7926025390625	2	575.792589	1149.57063	0.55292	0.00031837	-0.22587	-0.00013005	0.32705	0.00018831	575.7923205364916	80.638	0.68816	80.578	80.27	80.958	-0.059692					48	17	4	0	0	0	0.026451	4	8130	8095;8105;8117;8130		120.62	38.612	1	357840			56447	5727	37748	37763	63813;63814;63815;63816	63816					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.792724609375	2	575.792589	1149.57063	0.33315	0.00019183	-0.26417	-0.00015211	0.068981	3.9719E-05	575.7922513822991	80.424	0.8073	80.48	80.187	80.995	0.055916					60	20	4	0	0	0	0.0018445	4	7986	7964;7973;7986;8004		143.11	46.916	1	346980			56448	5727	37748	37763	63817;63818;63819;63820	63819					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.7918701171875	2	575.792589	1149.57063	0.58792	0.00033852	-0.36745	-0.00021157	0.22047	0.00012695	575.7921375037755	80.343	0.87334	80.48	80.176	81.049	0.13701					67	24	4	0	0	0	0.17307	4	7665	7634;7651;7665;7678		79.451	10.605	1	352450			56449	5727	37748	37763	63821;63822;63823;63824	63823					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.792236328125	2	575.792589	1149.57063	0.69244	0.0003987	-0.55306	-0.00031845	0.13938	8.0254E-05	575.792113620692	80.316	0.71577	80.458	80.188	80.904	0.14117					76	23	4	0	0	0	0.053315	4	7664	7642;7652;7664;7674		106.42	29.569	1	404920			56450	5727	37748	37763	63825;63826;63827;63828	63827					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.7924194335938	2	575.792589	1149.57063	-1.1001	-0.00063345	1.1879	0.00068401	0.087822	5.0567E-05	575.7931002500137	80.358	0.81116	80.463	80.223	81.034	0.10526					73	22	4	0	0	0	0.026451	4	7609	7602;7609;7618;7627		120.62	57.648	1	463680			56451	5727	37748	37763	63829;63830;63831;63832	63830					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.7928466796875	2	575.792589	1149.57063	-0.79375	-0.00045704	1.0644	0.00061287	0.27065	0.00015584	575.793115162251	79.992	0.80356	80.408	80.04	80.843	0.41621					51	18	4	0	0	0	0.0039032	3	9161	9161;9173;9184		138.24	29.569	1	790460			56452	5727	37748	37763	63833;63834;63835	63833					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.7927856445312	2	575.792589	1149.57063	-0.39724	-0.00022873	0.74498	0.00042895	0.34774	0.00020023	575.7927658641902	79.89	0.93016	80.44	80.042	80.972	0.54945					51	21	4	0	0	0	0.015327	3	9197	9176;9185;9197		128.86	48.922	1	938180			56453	5727	37748	37763	63836;63837;63838	63838					0.0018230589485028759
SYKEKKNW	8	Unmodified	_SYKEKKNW_					0	0	0			REV__nc|ENSG00000116191|Q86X27-2|RALGPS2	REV__nc|ENSG00000116191|Q86X27-2|RALGPS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.7850952148438	2	541.785099	1081.55564	-0.1772	-9.6005E-05	0.51969	0.00028156	0.34249	0.00018556	541.7852873202811	56.84	2.4261	56.873	56.56	58.986	0.033184					182	81	4	0	0	0	0.41376	1	5191	5191		79.939	2.6216	1	6132200	+		56454	18187	37749	37764	63839	63839					0.01812858817538654
SYKLILGPHKL	11	Unmodified	_SYKLILGPHKL_					0	0	0			REV__ENSG00000099991|ENST00000263119|CABIN1	REV__ENSG00000099991|ENST00000263119|CABIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	635.38671875	2	634.889898	1267.76524	1.3476	0.00085558	2.8664	0.0018198	4.214	0.0026754	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.67778	1	11469	11469		35.152	3.6222	1	42647000	+		56455	17121	37750	37765	63840	63840					0.14207101770648478
SYKLSLVKASA	11	Unmodified	_SYKLSLVKASA_					0	0	0			REV__ENSG00000133401|ENST00000438447|PDZD2	REV__ENSG00000133401|ENST00000438447|PDZD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.3475952148438	2	583.842613	1165.67067	3.6827	0.0021501	4.4094	0.0025744	8.0921	0.0047245	583.8448515127648	105.62	0.60435	105.81	105.52	106.12	0.18647					29	14	3	0	0	0	0.72106	1	12922	12922		28.081	2.5074	1	112560	+		56456	19076	37751	37766	63841	63841					0.0944654322865972
SYKRVQLFSRL	11	Unmodified	_SYKRVQLFSRL_					0	0	0			REV__nc|ENSG00000169398|Q05397-4|PTK2	REV__nc|ENSG00000169398|Q05397-4|PTK2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.2333068847656	3	466.273499	1395.79867	0.48393	0.00022564	-0.5353	-0.0002496	-0.051374	-2.3954E-05	466.27317302353543	69.056	0.67055	69.185	68.855	69.526	0.12838					101	28	5	0	0	0	0.17302	1	6257	6257		39.873	22.04	1	1342500	+		56457	21576	37752	37767	63842	63842					0.11660103542544675
SYLESILTY	9	Unmodified	_SYLESILTY_					0	0	0			REV__ENST00000369306.7_1_1:145523400-145523604:+|nuORF	REV__ENST00000369306.7_1_1:145523400-145523604:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.7769775390625	2	544.779148	1087.54374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.51	1	107.62	107.12	108.12	0.10396								0	0	0	0.28772	1	13116	13116		35.618	2.1027	1		+		56458	25620	37753	37768	63843	63843					0.0034719728366781055
SYLGIRLQETK	11	Unmodified	_SYLGIRLQETK_					0	0	0			REV__ENST00000515730.1_1_8:87493985-87494276:-|nuORF	REV__ENST00000515730.1_1_8:87493985-87494276:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.7736511230469	3	436.58211	1306.7245	-0.7952	-0.00034717	1.3076	0.00057086	0.51237	0.00022369	436.5825311789391	27.792	0.56544	27.695	27.446	28.011	-0.096947					30	12	3	0	0	0	0.17244	1	1636	1636		19.627	0	1	176380	+		56459	28038	37754	37769	63844	63844					0.08340715660369824
SYLGVTYC	8	Unmodified	_SYLGVTYC_					0	0	0		ENST00000484760.1_1_10:79773365-79779077:-|nuORF	ENST00000484760.1_1_10:79773365-79779077:-|nuORF	ENST00000484760.1_1_10:79773365-79779077:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.88177490234375	2	453.207304	904.400055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.949	1	15.866	15.366	16.366	-0.083363								0	0	0	0.29452	1	94	94		33.516	1.5607	1				56460	12545	37755	37770	63845	63845					-0.05596928028262482
SYLVILVG	8	Unmodified	_SYLVILVG_					0	0	0			REV__nc|ENSG00000135119|Q96EX2-3|RNFT2	REV__nc|ENSG00000135119|Q96EX2-3|RNFT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.24652099609375	2	432.265479	862.516405	-1.8337	-0.00079266	-2.2147	-0.00095732	-4.0484	-0.00175	432.2640247021284	97.993	0.53054	98.189	97.935	98.466	0.19585					18	11	2	0	0	0	0.4196	1	10077	10077		28.254	8.8943	1	75603	+		56461	19194	37756	37771	63846	63846					0.07964758533955774
SYMLTHLP	8	Unmodified	_SYMLTHLP_					0	0	0		ENST00000306336.5_2_2:85835764-85835920:-|nuORF	ENST00000306336.5_2_2:85835764-85835920:-|nuORF	ENST00000306336.5_2_2:85835764-85835920:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.24371337890625	2	481.244221	960.473888	-0.28493	-0.00013712	2.9987	0.0014431	2.7137	0.001306	481.2455876545853	21.634	0.56738	21.57	21.308	21.875	-0.064743					27	17	2	0	0	0	0.86791	1	654	654		28.254	0	1	42453			56462	9858	37757	37772	63847	63847					-0.007929598659416115
SYNLQLSSY	9	Unmodified	_SYNLQLSSY_					0	0	0		ENST00000522362.6_1_8:26364258-26364426:-|nuORF	ENST00000522362.6_1_8:26364258-26364426:-|nuORF	ENST00000522362.6_1_8:26364258-26364426:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	537.7593994140625	2	537.758746	1073.50294	-1.5189	-0.0008168	1.6486	0.00088654	0.12969	6.9741E-05	537.7594798625871	34.479	0.69151	34.479	34.248	34.939	0					43	17	4	0	0	0	0.33718	1	1876	1876		62.107	9.1707	1	406800			56463	13186	37758	37773	63848	63848					-0.03087144035930578
SYNTQGAA	8	Unmodified	_SYNTQGAA_					0	0	0		ENSG00000239306|ENST00000310137|RBM14	ENSG00000239306|ENST00000310137|RBM14	ENSG00000239306|ENST00000310137|RBM14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.25653076171875	2	406.182675	810.350796	-0.36236	-0.00014718	0.92602	0.00037613	0.56366	0.00022895	406.1828906136005	26.331	1.1908	26.292	25.615	26.805	-0.038525					48	26	3	0	0	0	0.4196	1	1233	1233		17.365	0	1	45238			56464	8767	37759	37774	63849	63849					-0.06196499992859117
SYPRRKEQWEL	11	Unmodified	_SYPRRKEQWEL_					0	0	0			REV__ENST00000601501.5_1_19:50354350-50358367:+|nuORF	REV__ENST00000601501.5_1_19:50354350-50358367:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.9269714355469	3	497.92828	1490.76301	-1.931	-0.00096151	-0.13956	-6.9493E-05	-2.0706	-0.001031	497.9280934162186	15.518	0.2312	15.518	15.423	15.654	0					27	10	4	0	0	0	0.77803	1	35	35		15.921	1.1418	1	143220	+		56465	17492	37760	37775	63850	63850					0.03726021294914972
SYPSCLKH	8	Unmodified	_SYPSCLKH_					0	0	0		nc|ENSG00000149201|Q6ZN84-3|CCDC81;nc|ENSG00000149201|Q6ZN84-2|CCDC81;ENSG00000149201|ENST00000445632|CCDC81	nc|ENSG00000149201|Q6ZN84-3|CCDC81	nc|ENSG00000149201|Q6ZN84-3|CCDC81	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7254333496094	2	467.726195	933.437837	-0.42719	-0.00019981	-1.025	-0.00047944	-1.4522	-0.00067925	467.7255891805631	62.298	1.2977	62.853	62.3	63.598	0.55449					73	29	4	0	0	0	0.90465	1	6700	6700		40.573	2.7611	1	594040			56466	5005	37761	37776	63851	63851					-0.03154417042799196
SYPVADEG	8	Unmodified	_SYPVADEG_					0	0	0			REV__ENSG00000219073|ENST00000337107|CELA3B	REV__ENSG00000219073|ENST00000337107|CELA3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.1843566894531	2	419.184883	836.355213	-1.8893	-0.00079195	-2.1143	-0.00088628	-4.0035	-0.0016782	419.18430198240395	92.613	1.5107	92.805	92.266	93.776	0.19238					65	35	4	0	0	0	0.86288	1	9319	9319		26.796	1.222	1	829610	+		56467	19755	37762	37777	63852	63852					-0.06951035569943542
SYPVAVKKTI	10	Unmodified	_SYPVAVKKTI_					0	0	0			REV__nc|ENSG00000109472|P16870-2|CPE	REV__nc|ENSG00000109472|P16870-2|CPE	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.330078125	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.86589	1	9866	9866		29.15	1.2673	1	2365500	+		56468	17761	37763	37778	63853	63853					0.10615462062582992
SYQMADIH	8	Oxidation (M)	_SYQM(Oxidation (M))ADIH_		SYQM(1)ADIH		SYQM(56)ADIH	0	0	1		nc|ENSG00000166734|Q6P4E1-3|GOLM2;nc|ENSG00000166734|Q6P4E1-2|GOLM2;nc|ENSG00000166734|Q6P4E1-5|GOLM2;ENSG00000166734|ENST00000299957|GOLM2	nc|ENSG00000166734|Q6P4E1-3|GOLM2	nc|ENSG00000166734|Q6P4E1-3|GOLM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.7135314941406	2	490.710742	979.406931	1.0119	0.00049656	4.4632	0.0021901	5.4751	0.0026867	490.71308582341277	95.838	1.6901	96.258	95.585	97.275	0.42051					139	40	6	0	0	0	0.9295	1	11520	11520		55.504	18.345	1	5952200			56469	6224	37764	37779	63854	63854		106			-0.08359615147685417
SYQMADIH	8	Oxidation (M)	_SYQM(Oxidation (M))ADIH_		SYQM(1)ADIH		SYQM(46)ADIH	0	0	1		nc|ENSG00000166734|Q6P4E1-3|GOLM2;nc|ENSG00000166734|Q6P4E1-2|GOLM2;nc|ENSG00000166734|Q6P4E1-5|GOLM2;ENSG00000166734|ENST00000299957|GOLM2	nc|ENSG00000166734|Q6P4E1-3|GOLM2	nc|ENSG00000166734|Q6P4E1-3|GOLM2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.7140197753906	2	490.710742	979.406931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.849	1	99.226	98.726	99.726	0.37679								0	0	0	0.30811	1	11960	11960		45.952	7.1458	1				56470	6224	37764	37779	63855	63855		106			-0.08359615147685417
SYQPGLIFV	9	Unmodified	_SYQPGLIFV_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2813720703125	2	512.279118	1022.54368	1.2711	0.00065114	3.0878	0.0015818	4.3588	0.0022329	512.2806294768477	86.671	3.241	86.597	85.234	88.475	-0.074005					135	75	2	0	0	0	0.67345	1	8953	8953		42.396	3.59	1	387010	+		56471	20414	37765	37780	63856	63856					0.03331242074330021
SYRIKPGKR	9	Unmodified	_SYRIKPGKR_					0	0	0			REV__nc|ENSG00000145824|O95715|CXCL14	REV__nc|ENSG00000145824|O95715|CXCL14	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8299560546875	2	552.835457	1103.65636	-0.7266	-0.00040169	-1.8924	-0.0010462	-2.619	-0.0014479	552.8344470907249	90.991	0.95181	91.06	90.128	91.079	0.069328					32	22	2	0	0	0	0.20789	1	9249	9249		32.812	0	1	88934	+		56472	29914	37766	37781	63857	63857					0.10867935591022615
SYRIPESL	8	Unmodified	_SYRIPESL_					0	0	0			REV__nc|ENSG00000253305|Q9Y5F9-2|PCDHGB6	REV__nc|ENSG00000253305|Q9Y5F9-2|PCDHGB6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.7867736816406	2	482.758549	963.502546	0.26677	0.00012879	-0.33068	-0.00015964	-0.063904	-3.085E-05	482.7582634685715	49.579	0.48915	50.039	49.789	50.278	0.45983					21	11	2	0	0	0	0.4196	1	4832	4832		18.324	0	1	696080	+		56473	23877	37767	37782	63858	63858					0.01933481034848228
SYRWRRRKRTR	11	Unmodified	_SYRWRRRKRTR_					0	0	0			REV__ENST00000433071.2_1_21:32931573-32932426:+|nuORF	REV__ENST00000433071.2_1_21:32931573-32932426:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.9840698242188	3	540.985457	1619.93454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.232	1	15.745	15.245	16.245	-0.48718								0	0	0	0.56276	1	104	104		1.4188	1.0782	1		+		56474	26643	37768	37783	63859	63859					0.14937235896559287
SYSKIIFVRGN	11	Unmodified	_SYSKIIFVRGN_					0	0	0			REV__ENSG00000185728|ENST00000539294|YTHDF3	REV__ENSG00000185728|ENST00000539294|YTHDF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.3636474609375	2	642.358962	1282.70337	1.6043	0.0010305	4.0273	0.002587	5.6316	0.0036175	642.3621659530644	110.8	0.90775	110.92	110.61	111.52	0.11658					128	36	4	0	0	0	0.65746	1	11923	11923		37.812	3.639	1	486380	+		56475	22788	37769	37784	63860	63860					0.0733275035152019
SYTFTVPAKP	10	Unmodified	_SYTFTVPAKP_					0	0	0		ENST00000304698.9_1_2:187605165-187608267:+|nuORF	ENST00000304698.9_1_2:187605165-187608267:+|nuORF	ENST00000304698.9_1_2:187605165-187608267:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.790771484375	2	555.795132	1109.57571	0.20741	0.00011528	-4.3617	-0.0024242	-4.1543	-0.002309	555.7925914671927	27.455	0.75734	27.416	27.075	27.832	-0.038523					30	17	2	0	0	0	0.70553	1	1321	1321		44.377	1.981	1	58602			56476	9840	37770	37785	63861	63861					0.0253060975749122
SYVFIVVAIL	10	Unmodified	_SYVFIVVAIL_					0	0	0		ENSG00000172289|ENST00000307552|OR10V1	ENSG00000172289|ENST00000307552|OR10V1	ENSG00000172289|ENST00000307552|OR10V1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	562.3432006835938	2	562.341718	1122.66888	0.40646	0.00022857	2.9431	0.001655	3.3495	0.0018836	562.3432469329894	90.325	4.336	90.539	89.434	93.77	0.21404					201	103	3	0	0	0	0.86482	1	9062	9062		25.45	1.9275	1	624710			56477	6759	37771	37786	63862	63862					0.11245534210706865
SYVPAVSC	8	Unmodified	_SYVPAVSC_					0	0	0			REV__ENSG00000106624|ENST00000223357|AEBP1	REV__ENSG00000106624|ENST00000223357|AEBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.19384765625	2	413.194196	824.37384	-0.094873	-3.9201E-05	-1.7383	-0.00071825	-1.8331	-0.00075745	413.1937900034763	84.315	3.1314	84.763	83.717	86.848	0.44736					207	76	5	0	0	0	0.87064	1	9799	9799		29.15	3.6994	1	10183000	+		56478	17620	37772	37787	63863	63863					-0.0453719719973833
SYVSVFYR	8	Unmodified	_SYVSVFYR_					0	0	0			REV__ENST00000311601.5_1_5:171763128-171763188:-|nuORF	REV__ENST00000311601.5_1_5:171763128-171763188:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.2619934082031	2	510.761092	1019.50763	0.055106	2.8146E-05	-4.2521	-0.0021718	-4.197	-0.0021437	510.7592008059974	28.508	0.59175	28.487	28.117	28.709	-0.021439					11	9	2	0	0	0	0.4196	1	1367	1367		19.36	1.0356	1	25369	+		56479	24907	37773	37788	63864	63864					-0.001342151025255589
SYVVGFMEF	9	Unmodified	_SYVVGFMEF_					0	0	0		nc|ENSG00000213996|Q9BZW4-2|TM6SF2;ENSG00000213996|ENST00000389363|TM6SF2	nc|ENSG00000213996|Q9BZW4-2|TM6SF2	nc|ENSG00000213996|Q9BZW4-2|TM6SF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.7496948242188	2	539.749336	1077.48412	0.47562	0.00025671	-0.89401	-0.00048254	-0.4184	-0.00022583	539.748808048142	19.175	0.28066	19.101	18.983	19.263	-0.073704					10	6	2	0	0	0	0.7932	1	400	400		24.203	1.1603	1	30073			56480	8611	37774	37789	63865	63865					-0.05152396931362091
TAAAEMVIYL	10	Unmodified	_TAAAEMVIYL_					0	0	0			REV__ENSG00000178093|ENST00000585580|TSSK6	REV__ENSG00000178093|ENST00000585580|TSSK6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	541.2850952148438	2	541.283543	1080.55253	0.12175	6.5901E-05	3.3837	0.0018316	3.5055	0.0018975	541.2853268986822	20.124	0.77876	20.2	19.898	20.676	0.075848					97	39	4	0	0	0	0.71042	1	463	463		44.117	0	1	586580	+		56481	22253	37775	37790	63866	63866					0.015478476484986459
TAAALVLLP	9	Unmodified	_TAAALVLLP_					0	0	0		ENST00000472270.1_1_X:70752999-70756209:+|nuORF;ENST00000488174.5_1_X:70752999-70764494:+|nuORF	ENST00000472270.1_1_X:70752999-70756209:+|nuORF	ENST00000472270.1_1_X:70752999-70756209:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7789001464844	2	434.778754	867.542954	0.023581	1.0252E-05	2.6379	0.0011469	2.6615	0.0011571	434.7797629333649	48.108	2.6391	48.098	47.574	50.213	-0.0093269					205	68	4	0	0	0	0.7932	1	3911	3911		26.796	5.0938	1	2315200			56482	12260	37776	37791	63867	63867					0.10388447425270897
TAADIFKQY	9	Unmodified	_TAADIFKQY_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7715454101562	2	528.771657	1055.52876	0.76193	0.00040289	-0.92455	-0.00048887	-0.16262	-8.5987E-05	528.7710240998827	55.619	0.66098	56.02	55.698	56.359	0.40101					45	15	4	0	0	0	1.7310000000000002E-20	1	5710	5710		180.87	83.397	1	2112900			56483	1975	37777	37792	63868	63868					0.00321750206330762
TAADIFKQY	9	Unmodified	_TAADIFKQY_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7716064453125	2	528.771657	1055.52876	0.41896	0.00022153	-0.59087	-0.00031244	-0.17191	-9.0904E-05	528.7712757120051	55.454	0.74665	56.022	55.658	56.404	0.56836					46	17	4	0	0	0	2.0213E-05	1	5695	5695		154.12	87.689	1	1901100			56484	1975	37777	37792	63869	63869					0.00321750206330762
TAADTAVYY	9	Unmodified	_TAADTAVYY_					0	0	0		nc|ENSG00000211956|P06331|IGHV4-34;nc|ENSG00000224373|P01825|IGHV4-59;nc|ENSG00000276775|A0A075B6R2|IGHV4-4;nc|ENSG00000231475|P0DP07|IGHV4-31;nc|ENSG00000231475|A0A087WSY4|IGHV4-30-2;nc|ENSG00000211970|A0A0C4DH41|IGHV4-61;nc|ENSG00000211959|P01824|IGHV4-39	nc|ENSG00000211956|P06331|IGHV4-34	nc|ENSG00000211956|P06331|IGHV4-34	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.72650146484375	2	487.726915	973.439277	-0.23229	-0.00011329	-0.084196	-4.1065E-05	-0.31648	-0.00015436	487.72675271300585	51.747	1.3653	52.182	51.7	53.065	0.43505					69	32	4	0	0	0	2.4111E-13	6	5147	5135;5147;5159;5171;5183;5199		167.82	81.338	1	7588700			56485	15243	37778	37793	63870;63871;63872;63873;63874;63875	63871					-0.04850504473051842
TAADTAVYY	9	Unmodified	_TAADTAVYY_					0	0	0		nc|ENSG00000211956|P06331|IGHV4-34;nc|ENSG00000224373|P01825|IGHV4-59;nc|ENSG00000276775|A0A075B6R2|IGHV4-4;nc|ENSG00000231475|P0DP07|IGHV4-31;nc|ENSG00000231475|A0A087WSY4|IGHV4-30-2;nc|ENSG00000211970|A0A0C4DH41|IGHV4-61;nc|ENSG00000211959|P01824|IGHV4-39	nc|ENSG00000211956|P06331|IGHV4-34	nc|ENSG00000211956|P06331|IGHV4-34	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.72650146484375	2	487.726915	973.439277	0.45649	0.00022264	-0.73056	-0.00035632	-0.27408	-0.00013367	487.72644551974395	51.554	0.78324	52.221	51.854	52.637	0.66729					57	18	4	0	0	0	3.031E-05	5	5143	5120;5131;5143;5155;5167		152.63	86.204	1	8286300			56486	15243	37778	37793	63876;63877;63878;63879;63880	63878					-0.04850504473051842
TAAGRPRP	8	Unmodified	_TAAGRPRP_					0	0	0		ENSG00000112029|ENST00000229758|FBXO5	ENSG00000112029|ENST00000229758|FBXO5	ENSG00000112029|ENST00000229758|FBXO5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2380065917969	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.84341	1	7166	7166		24.203	0	1	1692300			56487	2627	37779	37794	63881	63881					0.04243184505889985
TAAIKKTT	8	Unmodified	_TAAIKKTT_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2555847167969	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.83058	1	602	602		12.959	1.4482	1	867930	+		56488	17579	37780	37795	63882	63882					0.07886686385802477
TAAIKKTT	8	Unmodified	_TAAIKKTT_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2584533691406	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.81184	1	938	938		19.997	2.6318	1	1763000	+		56489	17579	37780	37795	63883	63883					0.07886686385802477
TAAKKARAG	9	Unmodified	_TAAKKARAG_					0	0	0		ENSG00000178372|ENST00000380332|CALML5	ENSG00000178372|ENST00000380332|CALML5	ENSG00000178372|ENST00000380332|CALML5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.268310546875	2	437.266876	872.519199	-2.1128	-0.00092385	-0.58974	-0.00025787	-2.7025	-0.0011817	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.77244	1	883	883		32.812	2.3088	1	1366900			56490	7201	37781	37796	63884	63884					0.0778402671146523
TAAKKDILLV	10	Unmodified	_TAAKKDILLV_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B;nc|ENSG00000083642|Q9NTI5-3|PDS5B;ENST00000498550.5_1_13:33222909-33262824:+|nuORF	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	536.16357421875	2	536.342249	1070.66995	0.15926	8.5418E-05	0.030001	1.6091E-05	0.18926	0.00010151	536.3423633977275	25.426	0.32688	25.532	25.423	25.75	0.1054					23	16	2	0	0	0	0.37624	1	916	916		19.997	0.89325	1	52910			56491	1504	37782	37797	63885	63885					0.1374374857962266
TAAKLNKH	8	Unmodified	_TAAKLNKH_					0	0	0		ENSG00000113088|ENST00000231009|GZMK	ENSG00000113088|ENST00000231009|GZMK	ENSG00000113088|ENST00000231009|GZMK	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.78765869140625	2	441.761426	881.5083	-1.8599	-0.00082162	-2.5615	-0.0011316	-4.4214	-0.0019532	441.7601271851266	41.58	0.37724	41.58	41.265	41.642	0					12	9	2	0	0	0	0.4196	1	2782	2782		35.618	0	1	40863			56492	2697	37783	37798	63886	63886					0.06280624337182417
TAAKLNKH	8	Unmodified	_TAAKLNKH_					0	0	0		ENSG00000113088|ENST00000231009|GZMK	ENSG00000113088|ENST00000231009|GZMK	ENSG00000113088|ENST00000231009|GZMK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78656005859375	2	441.761426	881.5083	-2.6336	-0.0011634	-1.6171	-0.00071436	-4.2507	-0.0018778	441.76080815365196	40.969	0.17702	41.361	41.202	41.379	0.39209					6	4	2	0	0	0	0.4196	1	3523	3523		51.335	29.376	1	412940			56493	2697	37783	37798	63887	63887					0.06280624337182417
TAAKRHALS	9	Unmodified	_TAAKRHALS_					0	0	0			REV__ENST00000490689.3_1_3:157815429-157815600:-|nuORF	REV__ENST00000490689.3_1_3:157815429-157815600:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.7771911621094	2	477.777608	953.540663	-0.45612	-0.00021793	0.42614	0.0002036	-0.029982	-1.4325E-05	477.77766993350735	30.046	0.70521	30.074	29.833	30.538	0.028618					29	15	3	0	0	0	0.78124	1	1943	1943		30.318	1.1682	1	357920	+		56494	27641	37784	37799	63888	63888					0.0620341174017085
TAAKSITKK	9	Unmodified	_TAAKSITKK_					0	0	0		ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2960205078125	2	474.297842	946.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.085	1	15.598	15.098	16.098	-0.48718								0	0	0	0.29475	1	85	85		32.812	1.2826	1				56495	3880	37785	37800	63889	63889					0.10570333339933313
TAAKSITKK	9	Unmodified	_TAAKSITKK_					0	0	0		ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	ENSG00000133574|ENST00000255945|GIMAP4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2980041503906	2	474.297842	946.581131	-0.52053	-0.00024689	0.66549	0.00031564	0.14496	6.8754E-05	474.29793789685436	16.095	0.36505	15.496	15.375	15.74	-0.59873					13	7	3	0	0	0	0.70638	1	88	88		40.058	2.8991	1	91355			56496	3880	37785	37800	63890	63890					0.10570333339933313
TAAKTLVLCV	10	Unmodified	_TAAKTLVLCV_					0	0	0		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8039245605469	2	509.801903	1017.58925	1.6791	0.000856	2.4083	0.0012278	4.0874	0.0020838	509.8030266591789	99.076	1.3966	99.438	98.566	99.963	0.36136					61	34	2	0	0	0	0.86047	1	11954	11954		23.523	1.5628	1	478110			56497	4382	37786	37801	63891	63891					0.08116144265068215
TAALLFMI	8	Unmodified	_TAALLFMI_					0	0	0		nc|ENSG00000143921|Q9H221-2|ABCG8;ENSG00000143921|ENST00000272286|ABCG8	nc|ENSG00000143921|Q9H221-2|ABCG8	nc|ENSG00000143921|Q9H221-2|ABCG8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2551574707031	2	440.254057	878.493561	-0.98132	-0.00043203	3.6346	0.0016002	2.6533	0.0011681	440.2555879612135	73.888	0.66461	74.276	73.956	74.62	0.38779					36	16	3	0	0	0	0.89457	1	8298	8298		37.028	0	1	722590			56498	4675	37787	37802	63892	63892					0.049454161448238665
TAALPLEP	8	Unmodified	_TAALPLEP_					0	0	0		nc|ENSG00000160460|Q9H254-3|SPTBN4;ENSG00000160460|ENST00000598249|SPTBN4;ENST00000596900.5_1_19:41036434-41060733:+|nuORF;nc|ENSG00000160460|Q9H254-5|SPTBN4;nc|ENSG00000160460|Q9H254-4|SPTBN4	nc|ENSG00000160460|Q9H254-3|SPTBN4	nc|ENSG00000160460|Q9H254-3|SPTBN4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.78521728515625	2	406.231636	810.448719	-1.9124	-0.00077686	2.6441	0.0010741	0.73176	0.00029726	406.2325690405744	34.716	0.94926	34.755	34.424	35.373	0.038639					66	35	3	0	0	0	0.4196	1	1749	1749		11.511	4.7755	1	295080			56499	5590	37788	37803	63893	63893					0.03591308603131438
TAAPKSPE	8	Unmodified	_TAAPKSPE_					0	0	0			REV__ENSG00000124788|ENST00000436367|ATXN1	REV__ENSG00000124788|ENST00000436367|ATXN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5487060546875	2	400.711068	799.407583	1.3039	0.00052249	0.13949	5.5894E-05	1.4434	0.00057839	400.7110729033856	49.624	0.57149	50.084	49.748	50.32	0.45983					17	13	2	0	0	0	0.4196	1	4795	4795		29.15	0	1	216800	+		56500	18614	37789	37804	63894	63894					-0.00014452436334977392
TAAPKSPE	8	Unmodified	_TAAPKSPE_					0	0	0			REV__ENSG00000124788|ENST00000436367|ATXN1	REV__ENSG00000124788|ENST00000436367|ATXN1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	400.711068	799.407583	0.42257	0.00016933	1.411	0.00056541	1.8336	0.00073474	400.711427513731	49.514	0.40304	50.359	50.074	50.477	0.84501	0.13731	0.00061131	NaN	37.159	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199290	+		56501	18614	37789	37804							-0.00014452436334977392
TAATIAERR	9	Unmodified	_TAATIAERR_					0	0	0			REV__nc|ENSG00000135441|P78537-2|BLOC1S1	REV__nc|ENSG00000135441|P78537-2|BLOC1S1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7801208496094	2	494.780348	987.546142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.465	1	86.614	86.114	87.114	0.14902								0	0	0	0.30416	1	8506	8506		29.15	2.3535	1		+		56502	19223	37790	37805	63895	63895					0.051870905319901794
TAATKTRRR	9	Unmodified	_TAATKTRRR_					0	0	0			REV__ENST00000538118.5_1_12:25047396-25055084:-|nuORF	REV__ENST00000538118.5_1_12:25047396-25055084:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.81689453125	2	530.820338	1059.62612	1.8627	0.00098874	-0.69055	-0.00036656	1.1721	0.00062218	530.8198847341043	89.227	1.2903	89.155	88.754	90.044	-0.07238					46	29	2	0	0	0	0.20789	1	9407	9407		30.504	2.6214	1	1021400	+		56503	28434	37791	37806	63896	63896					0.0986957692582564
TAAVVPLMGV	10	Unmodified	_TAAVVPLMGV_					0	0	0		ENSG00000198569|ENST00000673835|SLC34A3	ENSG00000198569|ENST00000673835|SLC34A3	ENSG00000198569|ENST00000673835|SLC34A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27777099609375	2	479.275521	956.536489	0.22517	0.00010792	4.2433	0.0020337	4.4685	0.0021416	479.2774672255816	97.14	0.77187	97.53	97.073	97.845	0.39065					47	18	3	0	0	0	0.81018	1	11697	11697		38.806	13.232	1	996060			56504	8289	37792	37807	63897	63897					0.0564818620226788
TAAWGKPPS	9	Unmodified	_TAAWGKPPS_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C;ENST00000591851.5_1_17:76047306-76073478:+|nuORF	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.793212890625	2	457.74016	913.465767	1.231	0.00056349	-2.006	-0.00091823	-0.775	-0.00035475	457.74148964097714	35.081	0.19277	35.463	35.404	35.597	0.3812					5	4	2	0	0	0	0.20789	1	2690	2690		19.104	0	1	24092			56505	1405	37793	37808	63898	63898					0.005572292089368602
TACCPGILI	9	Carbamidomethyl (C)	_TAC(Carbamidomethyl (C))CPGILI_	TAC(0.5)C(0.5)PGILI		TAC(0)C(0)PGILI		0	1	0			REV__ENSG00000132549|ENST00000357162|VPS13B	REV__ENSG00000132549|ENST00000357162|VPS13B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.76348876953125	2	474.238081	946.461609	-0.6192	-0.00029365	0.32446	0.00015387	-0.29474	-0.00013978	474.2381418845378	29.222	0.34619	29.193	28.954	29.3	-0.029207					13	7	2	0	0	0	0.1985	1	1831	1831		68.485	21.718	2	280400	+		56506	19011	37794	37809	63899	63899	240;241				-0.013763196006038925
TACCPGILI	9	Carbamidomethyl (C)	_TAC(Carbamidomethyl (C))CPGILI_	TAC(0.5)C(0.5)PGILI		TAC(0)C(0)PGILI		0	1	0			REV__ENSG00000132549|ENST00000357162|VPS13B	REV__ENSG00000132549|ENST00000357162|VPS13B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.76348876953125	2	474.238081	946.461609	-0.38204	-0.00018118	-4.4492	-0.00211	-4.8312	-0.0022911	474.23567947763615	29.497	0.86163	29.407	28.93	29.792	-0.089544					36	19	3	0	0	0	0.20789	1	1849	1849		68.485	23.954	2	315650	+		56507	19011	37794	37809	63900	63900	240;241				-0.013763196006038925
TACKPLLK	8	Unmodified	_TACKPLLK_					0	0	0			REV__nc|ENSG00000004866|Q9NRC1-4|ST7	REV__nc|ENSG00000004866|Q9NRC1-4|ST7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26556396484375	2	437.264956	872.515359	-1.6247	-0.00071044	3.2874	0.0014375	1.6627	0.00072704	437.26636390033156	24.021	1.8701	24.079	23.417	25.287	0.058165					191	86	4	0	0	0	0.87479	1	819	819		30.504	2.2494	1	2248600	+		56508	16067	37795	37810	63901	63901					0.07400220893396181
TACKPLLK	8	Unmodified	_TACKPLLK_					0	0	0			REV__nc|ENSG00000004866|Q9NRC1-4|ST7	REV__nc|ENSG00000004866|Q9NRC1-4|ST7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2655334472656	2	437.264956	872.515359	0.46111	0.00020163	1.1649	0.00050936	1.626	0.00071098	437.2654513325837	23.967	1.9466	23.969	23.291	25.237	0.0018959					213	95	5	0	0	0	0.87922	1	773	773		31.955	2.8053	1	2561300	+		56509	16067	37795	37810	63902	63902					0.07400220893396181
TADDQRKSG	9	Unmodified	_TADDQRKSG_					0	0	0			REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1	REV__nc|ENSG00000029534|P16157-14|ANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.2362060546875	2	489.23597	976.457387	-0.22761	-0.00011136	1.1627	0.00056882	0.93506	0.00045747	489.2364963124142	86.068	2.1429	86.511	85.703	87.846	0.44331					118	51	4	0	0	0	0.67345	1	10139	10139		42.396	4.5846	1	3099300	+		56510	29680;29681	37796	37811	63903	63903					-0.031783694983232635
TADFSGDV	8	Unmodified	_TADFSGDV_					0	0	0		ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.17626953125	2	406.177058	810.339563	0.30537	0.00012404	-2.6747	-0.0010864	-2.3693	-0.00096235	406.17587455493447	95.496	1.4528	95.915	95.061	96.514	0.41964					68	35	2	0	0	0	0.884	1	11464	11464		33.516	3.674	1	1268100			56511	4219	37797	37812	63904	63904					-0.07319322086982538
TADHNLLLY	9	Unmodified	_TADHNLLLY_					0	0	0		ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2791137695312	2	530.277106	1058.53966	-0.036045	-1.9114E-05	4.145	0.002198	4.1089	0.0021789	530.2801983138189	59.193	1.3973	59.179	58.111	59.508	-0.013729					80	45	3	0	0	0	0.25483	2	5438	5411;5438		68.787	10.005	1	262600			56512	7556	37798	37813	63905;63906	63906					0.01273152580643
TADHNLLLY	9	Unmodified	_TADHNLLLY_					0	0	0		ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2787475585938	2	530.277106	1058.53966	0.60487	0.00032075	3.4845	0.0018478	4.0894	0.0021685	530.2794405918029	59.156	1.3576	59.126	58.133	59.49	-0.030888					75	39	3	0	0	0	0.35373	1	5535	5535		60.972	9.6365	1	335700			56513	7556	37798	37813	63907	63907					0.01273152580643
TADYDKALIFN	11	Unmodified	_TADYDKALIFN_					0	0	0		ENST00000521993.2_1_8:37597892-37607371:+|nuORF;nc|ENSG00000147475|O94905-2|ERLIN2;nc|ENSG00000147475|O94905-3|ERLIN2;ENSG00000147475|ENST00000519638|ERLIN2	ENST00000521993.2_1_8:37597892-37607371:+|nuORF	ENST00000521993.2_1_8:37597892-37607371:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	635.9299926757812	2	635.819335	1269.62412	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.358	1	61.747	61.247	62.247	0.38891								0	0	0	0.56276	1	6540	6540		28.081	0.19925	1				56514	4906	37799	37814	63908	63908					9.05860672446579E-05
TAEGIILLF	9	Unmodified	_TAEGIILLF_					0	0	0		nc|ENSG00000105369|P11912-2|CD79A;ENSG00000105369|ENST00000221972|CD79A	nc|ENSG00000105369|P11912-2|CD79A	nc|ENSG00000105369|P11912-2|CD79A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	488.7893371582031	2	488.789318	975.564084	1.4412	0.00070445	-1.6239	-0.00079376	-0.18272	-8.931E-05	488.78836786844454	102.14	0.87674	102.4	102.03	102.91	0.26323					61	21	5	0	0	0	0.1538	2	12388	12388;12411		83.287	11.909	1	1967000			56515	2209	37800	37815	63909;63910	63909					0.07532412734155969
TAEGIILLF	9	Unmodified	_TAEGIILLF_					0	0	0		nc|ENSG00000105369|P11912-2|CD79A;ENSG00000105369|ENST00000221972|CD79A	nc|ENSG00000105369|P11912-2|CD79A	nc|ENSG00000105369|P11912-2|CD79A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7890625	2	488.789318	975.564084	2.6694	0.0013048	-2.8817	-0.0014085	-0.21227	-0.00010375	488.7877664062211	102.11	0.80855	102.41	102.13	102.94	0.29864					53	18	4	0	0	0	0.028559	1	12446	12446		119.22	33.862	1	2328000			56516	2209	37800	37815	63911	63911					0.07532412734155969
TAEISAREG	9	Unmodified	_TAEISAREG_					0	0	0		ENSG00000214087|ENST00000622299|ARL16;nc|ENSG00000214087|Q0P5N6|ARL16	ENSG00000214087|ENST00000622299|ARL16	ENSG00000214087|ENST00000622299|ARL16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.733642578125	2	467.235439	932.456324	-0.78555	-0.00036704	-3.5718	-0.0016689	-4.3573	-0.0020359	467.2336097851308	69.799	1.6914	69.762	69.451	71.142	-0.036964					147	87	2	0	0	0	0.73802	1	6851	6851		37.812	2.1932	1	4050000			56517	8616	37801	37816	63912	63912					-0.012605838672357095
TAESWSPGQP	10	Unmodified	_TAESWSPGQP_					0	0	0		ENST00000420411.7_1_X:1520988-1531905:+|nuORF	ENST00000420411.7_1_X:1520988-1531905:+|nuORF	ENST00000420411.7_1_X:1520988-1531905:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2405395507812	2	530.240721	1058.46689	-0.033627	-1.783E-05	0.58581	0.00031062	0.55219	0.00029279	530.240968765566	111.53	2.3024	111.47	110.12	112.42	-0.059937					158	81	3	0	0	0	0.85251	1	12188	12188		19.997	0	1	182550			56518	11450	37802	37817	63913	63913					-0.06000601212804213
TAETKKVV	8	Unmodified	_TAETKKVV_					0	0	0		ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2633361816406	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.90983	1	2403	2403		42.396	0	1	3673500			56519	1116	37803	37818	63914	63914					0.07010669040232642
TAETKKVV	8	Unmodified	_TAETKKVV_					0	0	0		ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26312255859375	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.8347	2	3110	3110;3156		23.042	1.0826	1	5350400			56520	1116	37803	37818	63915;63916	63915					0.07010669040232642
TAETKKVV	8	Unmodified	_TAETKKVV_					0	0	0		ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633972167969	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.88601	1	2542	2542		34.173	0.65696	1	2862500			56521	1116	37803	37818	63917	63917					0.07010669040232642
TAETKKVV	8	Unmodified	_TAETKKVV_					0	0	0		ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26287841796875	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.82658	3	2789	2644;2684;2789		35.618	4.0885	1	22924000			56522	1116	37803	37818	63918;63919;63920	63920					0.07010669040232642
TAETKKVV	8	Unmodified	_TAETKKVV_					0	0	0		ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2633056640625	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.81548	4	2763	2652;2693;2751;2763		44.117	2.1574	1	21381000			56523	1116	37803	37818	63921;63922;63923;63924	63924					0.07010669040232642
TAETKKVV	8	Unmodified	_TAETKKVV_					0	0	0		ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2626037597656	2	438.263468	874.512382	-1.3298	-0.00058278	1.46	0.00063987	0.13025	5.7085E-05	438.2640159596406	58.026	1.8731	58.42	57.697	59.57	0.39407					78	45	2	0	0	0	0.91472	1	6035	6035		44.117	4.864	1	1391400			56524	1116	37803	37818	63925	63925					0.07010669040232642
TAETKKVV	8	Unmodified	_TAETKKVV_					0	0	0		ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2634582519531	2	438.263468	874.512382	1.5783	0.00069171	-2.4144	-0.0010581	-0.83609	-0.00036643	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.88601	2	2761	2677;2761		40.778	1.5253	1	92475000			56525	1116	37803	37818	63926;63927	63927					0.07010669040232642
TAETKKVV	8	Unmodified	_TAETKKVV_					0	0	0		ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2599182128906	2	438.263468	874.512382	-1.2747	-0.00055866	-0.66852	-0.00029299	-1.9432	-0.00085165	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.89494	1	3565	3565		37.159	2.9866	1	219150000			56526	1116	37803	37818	63928	63928					0.07010669040232642
TAEVEGTK	8	Unmodified	_TAEVEGTK_					0	0	0		nc|ENSG00000038427|P13611-5|VCAN;ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-2|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF	nc|ENSG00000038427|P13611-5|VCAN	nc|ENSG00000038427|P13611-5|VCAN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.2973937988281	2	417.713808	833.413062	-1.3036	-0.00054452	2.9626	0.0012375	1.6591	0.00069301	417.71573752749066	71.297	0.06398	71.373	71.349	71.412	0.076225					4	2	2	0	0	0	0.4196	1	6467	6467		21.96	1.013	1	30124			56527	917	37804	37819	63929	63929					-0.010307736445042792
TAFADSAIDF	10	Unmodified	_TAFADSAIDF_					0	0	0			REV__ENSG00000102547|ENST00000409308|CAB39L	REV__ENSG00000102547|ENST00000409308|CAB39L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.246826171875	2	529.245472	1056.47639	1.0673	0.00056485	-0.41034	-0.00021717	0.65692	0.00034767	529.2450856588766	66.967	2.4809	67.353	66.659	69.14	0.38515					84	65	2	0	0	0	0.5766	1	7322	7322		51.335	6.9583	1	288520	+		56528	17346	37805	37820	63930	63930					-0.04958832927286494
TAFADSAIDF	10	Unmodified	_TAFADSAIDF_					0	0	0			REV__ENSG00000102547|ENST00000409308|CAB39L	REV__ENSG00000102547|ENST00000409308|CAB39L	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	529.245472	1056.47639	0.0012725	6.7346E-07	3.2467	0.0017183	3.2479	0.001719	529.2470915640489	67.343	0.65025	67.307	66.967	67.617	-0.035698	-0.01035	0.0027844	NaN	51.335	37	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74068	+		56529	17346	37805	37820							-0.04958832927286494
TAFAKRRG	8	Unmodified	_TAFAKRRG_					0	0	0			REV__nc|ENSG00000249730|P0C629|OR10J4	REV__nc|ENSG00000249730|P0C629|OR10J4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.7649230957031	2	453.767043	905.519533	0.27129	0.0001231	-3.0095	-0.0013656	-2.7382	-0.0012425	453.76550964369613	41.947	1.1764	41.916	41.067	42.244	-0.030991					46	29	2	0	0	0	0.87479	1	3112	3112		30.504	0.6621	1	291970	+		56530	22185	37806	37821	63931	63931					0.0629944643133058
TAFAKRRG	8	Unmodified	_TAFAKRRG_					0	0	0			REV__nc|ENSG00000249730|P0C629|OR10J4	REV__nc|ENSG00000249730|P0C629|OR10J4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.765380859375	2	453.767043	905.519533	-1.2902	-0.00058543	-2.2694	-0.0010298	-3.5595	-0.0016152	453.76607829009424	41.177	0.83587	41.181	40.825	41.661	0.0043983					78	27	4	0	0	0	0.93293	1	2682	2682		51.335	17.82	1	657720	+		56531	22185	37806	37821	63932	63932					0.0629944643133058
TAFAKRRG	8	Unmodified	_TAFAKRRG_					0	0	0			REV__nc|ENSG00000249730|P0C629|OR10J4	REV__nc|ENSG00000249730|P0C629|OR10J4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.76593017578125	2	453.767043	905.519533	0.22799	0.00010345	-2.741	-0.0012438	-2.5131	-0.0011403	453.76577882768925	41.923	1.745	41.996	41.584	43.329	0.073414					97	46	4	0	0	0	0.9295	1	2786	2786		55.504	5.4797	1	672610	+		56532	22185	37806	37821	63933	63933					0.0629944643133058
TAFAKRRG	8	Unmodified	_TAFAKRRG_					0	0	0			REV__nc|ENSG00000249730|P0C629|OR10J4	REV__nc|ENSG00000249730|P0C629|OR10J4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.7655944824219	2	453.767043	905.519533	-0.098866	-4.4862E-05	-2.9209	-0.0013254	-3.0198	-0.0013703	453.7655359393201	41.096	0.91404	41.05	40.674	41.588	-0.045467					76	30	3	0	0	0	0.89494	1	2684	2684		37.159	1.9584	1	750830	+		56533	22185	37806	37821	63934	63934					0.0629944643133058
TAFAKRRG	8	Unmodified	_TAFAKRRG_					0	0	0			REV__nc|ENSG00000249730|P0C629|OR10J4	REV__nc|ENSG00000249730|P0C629|OR10J4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.76544189453125	2	453.767043	905.519533	-1.5148	-0.00068738	-2.3218	-0.0010535	-3.8366	-0.0017409	453.76593536298236	40.85	0.48289	41.439	41.181	41.664	0.58915					44	13	4	0	0	0	0.91472	2	3524	3524;3559		55.504	7.5886	1	23640000	+		56534	22185	37806	37821	63935;63936	63935					0.0629944643133058
TAFAKRRG	8	Unmodified	_TAFAKRRG_					0	0	0			REV__nc|ENSG00000249730|P0C629|OR10J4	REV__nc|ENSG00000249730|P0C629|OR10J4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.763916015625	2	453.767043	905.519533	-1.6067	-0.00072906	-2.0857	-0.00094641	-3.6924	-0.0016755	453.76606039248026	41.272	1.9725	41.906	41.675	43.648	0.6339					112	50	4	0	0	0	0.9295	1	3603	3603		55.504	3.205	1	8512600	+		56535	22185	37806	37821	63937	63937					0.0629944643133058
TAFKKLDATGW	11	Unmodified	_TAFKKLDATGW_					0	0	0			REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8541259765625	2	619.332413	1236.65027	-0.34843	-0.00021579	3.8006	0.0023538	3.4521	0.002138	619.8353778709987	72.958	0.099548	72.918	72.854	72.953	-0.04039					5	3	2	0	0	0	0.7434	1	7138	7138		23.523	1.5628	1	23342	+		56536	27096	37807	37822	63938	63938					0.04141372568847146
TAFKKLDATGW	11	Unmodified	_TAFKKLDATGW_					0	0	0			REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	619.332413	1236.65027	-0.34843	-0.00021579	3.8006	0.0023538	3.4521	0.002138	619.8353778709987	72.958	0.099548	72.918	72.854	72.953	-0.04039	0.0036594	-0.00034036	NaN	23.523	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23342	+		56537	27096	37807	37822							0.04141372568847146
TAFKKLDATGW	11	Unmodified	_TAFKKLDATGW_					0	0	0			REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	619.332413	1236.65027	-0.68793	-0.00042606	4.3541	0.0026967	3.6662	0.0022706	619.3359200944024	72.828	0.18092	72.911	72.796	72.977	0.083107	-0.0036594	0.00034533	NaN	23.523	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28486	+		56538	27096	37807	37822							0.04141372568847146
TAFKVRLF	8	Unmodified	_TAFKVRLF_					0	0	0			REV__ENST00000467496.5_1_X:129474252-129484631:+|nuORF	REV__ENST00000467496.5_1_X:129474252-129484631:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.2984924316406	2	491.297645	980.580737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.95	1	107.98	107.48	108.48	0.036125								0	0	0	0.29344	1	11543	11543		31.955	8.9124	1		+		56539	17323	37808	37823	63939	63939					0.08966958410758252
TAFQNVVLV	9	Unmodified	_TAFQNVVLV_					0	0	0		ENSG00000184530|ENST00000329722|C6orf58	ENSG00000184530|ENST00000329722|C6orf58	ENSG00000184530|ENST00000329722|C6orf58	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.78399658203125	2	495.784567	989.554582	-0.95097	-0.00047148	0.47817	0.00023707	-0.4728	-0.00023441	495.7847227959132	49.007	0.76762	49.467	49.104	49.871	0.45983					41	18	3	0	0	0	0.7932	1	4746	4746		21.96	0.25755	1	1143300			56540	7619	37809	37824	63940	63940					0.0593864444861083
TAFRALGR	8	Unmodified	_TAFRALGR_					0	0	0		ENSG00000170961|ENST00000303924|HAS2	ENSG00000170961|ENST00000303924|HAS2	ENSG00000170961|ENST00000303924|HAS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2586364746094	2	446.261594	890.508634	1.3587	0.00060635	-3.7388	-0.0016685	-2.3801	-0.0010621	446.25987846269135	34.697	0.85524	35.078	34.893	35.749	0.3812					43	21	5	0	0	0	0.89043	1	2606	2606		35.618	4.0885	1	9488300			56541	6628	37810	37825	63941	63941					0.05900044057045761
TAFVVEHDFIM	11	Unmodified	_TAFVVEHDFIM_					0	0	0		ENSG00000164163|ENST00000296577|ABCE1;ENST00000510321.1_1_4:146044588-146044753:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF;ENST00000444025.1_1_7:23602199-23602811:-|nuORF	ENSG00000164163|ENST00000296577|ABCE1	ENSG00000164163|ENST00000296577|ABCE1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.8800964355469	3	436.88128	1307.62201	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.87	1	118.96	118.46	119.46	0.087753								0	0	0	0.56276	1	12520	12520		20.03	1.4994	1				56542	5928	37811	37826	63942	63942					-0.019496934027529278
TAGAHGGRL	9	Unmodified	_TAGAHGGRL_					0	0	0			REV__nc|ENSG00000021645|Q9HDB5-3|NRXN3	REV__nc|ENSG00000021645|Q9HDB5-3|NRXN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2274169921875	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.76255	1	7888	7888		35.618	0	1	888480	+		56543	29678	37812	37827	63943	63943					0.015265941262441629
TAGGRARLG	9	Unmodified	_TAGGRARLG_					0	0	0		ENST00000561241.1_1_15:63340374-63341172:-|nuORF	ENST00000561241.1_1_15:63340374-63341172:-|nuORF	ENST00000561241.1_1_15:63340374-63341172:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.7497253417969	2	429.74885	857.483148	0.19062	8.192E-05	1.861	0.00079976	2.0516	0.00088168	429.7494836550346	40.163	2.386	40.244	39.962	42.348	0.081345					177	71	3	0	0	0	0.77696	1	2510	2510		31.53	2.3803	1	3979000			56544	13831	37813	37828	63944	63944					0.04870569534602964
TAGKKGLRSD	10	Unmodified	_TAGKKGLRSD_					0	0	0			REV__ENSG00000173575|ENST00000394196|CHD2	REV__ENSG00000173575|ENST00000394196|CHD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7935791015625	2	516.793455	1031.57236	-0.047501	-2.4548E-05	0.082016	4.2386E-05	0.034515	1.7837E-05	516.7934444767742	88.478	3.8503	88.546	87.228	91.078	0.068161					256	90	4	0	0	0	0.86587	1	9055	9055		29.17	1.2878	1	692890	+		56545	21933	37814	37829	63945	63945					0.05783359703491442
TAGKKGLRSD	10	Unmodified	_TAGKKGLRSD_					0	0	0			REV__ENSG00000173575|ENST00000394196|CHD2	REV__ENSG00000173575|ENST00000394196|CHD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7931518554688	2	516.793455	1031.57236	1.5571	0.00080467	-1.5393	-0.0007955	0.017752	9.1739E-06	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.86621	1	9350	9350		26.063	4.1035	1	834930	+		56546	21933	37814	37829	63946	63946					0.05783359703491442
TAGLVRPEG	9	Unmodified	_TAGLVRPEG_					0	0	0			REV__nc|ENSG00000166928|Q96JA4-5|MS4A14	REV__nc|ENSG00000166928|Q96JA4-5|MS4A14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.314208984375	2	450.250892	898.48723	0.011976	5.3924E-06	-0.37521	-0.00016894	-0.36324	-0.00016355	450.25050863012405	22.052	0.84526	21.609	21.235	22.08	-0.44324					26	18	2	0	0	0	0.20789	1	807	807		15.642	0	1	108680	+		56547	30007	37815	37830	63947	63947					0.033926142376685675
TAGNAVRK	8	Unmodified	_TAGNAVRK_					0	0	0		ENST00000462572.1_1_7:143479852-143480367:+|nuORF	ENST00000462572.1_1_7:143479852-143480367:+|nuORF	ENST00000462572.1_1_7:143479852-143480367:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.7394104003906	2	408.737951	815.46135	1.2573	0.00051389	3.1459	0.0012858	4.4031	0.0017997	408.73920372763826	34.848	1.9965	35.229	34.977	36.973	0.3812					122	50	4	0	0	0	0.8347	1	2794	2794		23.042	1.3402	1	5754800			56548	12045	37816	37831	63948	63948					0.04623764786049378
TAGPICQRPGR	11	Unmodified	_TAGPICQRPGR_					0	0	0		ENST00000399410.7_1_16:16235147-16235213:+|nuORF	ENST00000399410.7_1_16:16235147-16235213:+|nuORF	ENST00000399410.7_1_16:16235147-16235213:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	578.31005859375	2	578.306207	1154.59786	3.0835	0.0017832	4.2928	0.0024826	7.3763	0.0042658	578.3084884476433	110.4	1.8051	110.37	110.09	111.9	-0.027641					157	59	5	0	0	0	0.67778	2	12196	12196;12213		35.152	2.3396	1	3259900			56549	11204	37817	37832	63949;63950	63949					0.0267451095423894
TAGTHPVGLQ	10	Unmodified	_TAGTHPVGLQ_					0	0	0		ENST00000484375.5_1_7:98972330-98988614:+|nuORF	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.26312255859375	2	490.761623	979.508694	0.97193	0.00047698	-1.4264	-0.00070005	-0.45452	-0.00022306	490.76046891491	20.127	0.40246	20.198	20.016	20.418	0.071127					24	15	2	0	0	0	0.67571	1	459	459		45.972	1.5951	1	32582			56550	12537	37818	37833	63951	63951					0.018119992663855555
TAGTHPVGLQ	10	Unmodified	_TAGTHPVGLQ_					0	0	0		ENST00000484375.5_1_7:98972330-98988614:+|nuORF	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	490.761623	979.508694	-0.27056	-0.00013278	-1.1408	-0.00055988	-1.4114	-0.00069267	490.76102974449566	20.477	0.36062	20.407	20.245	20.606	-0.069735	0.071207	-0.00084127	NaN	45.972	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32373			56551	12537	37818	37833							0.018119992663855555
TAGTHPVGLQ	10	Unmodified	_TAGTHPVGLQ_					0	0	0		ENST00000484375.5_1_7:98972330-98988614:+|nuORF	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	490.761623	979.508694	-1.2588	-0.00061779	-0.055872	-2.742E-05	-1.3147	-0.00064521	490.76148832168235	20.487	0.34177	20.417	20.293	20.635	-0.070013	0.080597	0.00022366	NaN	45.972	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33152			56552	12537	37818	37833							0.018119992663855555
TAGTHPVGLQ	10	Unmodified	_TAGTHPVGLQ_					0	0	0		ENST00000484375.5_1_7:98972330-98988614:+|nuORF	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	490.761623	979.508694	-0.78265	-0.0003841	0.25925	0.00012723	-0.52341	-0.00025687	490.7617122507382	20.408	0.38591	20.452	20.271	20.657	0.043749	0.11608	0.00053296	NaN	45.972	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58574			56553	12537	37818	37833							0.018119992663855555
TAGTHPVGLQ	10	Unmodified	_TAGTHPVGLQ_					0	0	0		ENST00000484375.5_1_7:98972330-98988614:+|nuORF	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	ENST00000484375.5_1_7:98972330-98988614:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	490.761623	979.508694	0.072321	3.5492E-05	-0.58787	-0.0002885	-0.51555	-0.00025301	490.7612185671028	20.13	0.46506	20.206	19.998	20.463	0.07585	-0.12998	-0.00029851	NaN	45.972	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80552			56554	12537	37818	37833							0.018119992663855555
TAGVARVCP	9	Unmodified	_TAGVARVCP_					0	0	0		ENST00000473515.5_1_6:108067761-108070999:-|nuORF	ENST00000473515.5_1_6:108067761-108070999:-|nuORF	ENST00000473515.5_1_6:108067761-108070999:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.9399719238281	2	437.234187	872.453822	-1.6496	-0.00072128	-1.0686	-0.00046724	-2.7183	-0.0011885	437.23337177600126	55.963	0.24906	55.963	55.789	56.038	0					9	6	2	0	0	0	0.20789	1	4770	4770		10.866	0	1	29917			56555	12283	37819	37834	63952	63952					0.012492891941064954
TAHCNLYL	8	Unmodified	_TAHCNLYL_					0	0	0		chr6:150972058-150983834|57|11.07|0.32|5.12|+|1|MTHFD1L,None|2	chr6:150972058-150983834|57|11.07|0.32|5.12|+|1|MTHFD1L,None|2	chr6:150972058-150983834|57|11.07|0.32|5.12|+|1|MTHFD1L,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.724853515625	2	467.726195	933.437837	-0.42719	-0.00019981	-1.025	-0.00047944	-1.4522	-0.00067925	467.7255891805631	62.298	1.2977	62.853	62.3	63.598	0.55449					73	29	4	0	0	0	0.884	1	6687	6687		33.516	8.0654	1	594040			56556	470	37820	37835	63953	63953					-0.031544170428105645
TAHDQKTAL	9	Unmodified	_TAHDQKTAL_					0	0	0		ENSG00000142875|ENST00000370685|PRKACB	ENSG00000142875|ENST00000370685|PRKACB	ENSG00000142875|ENST00000370685|PRKACB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.7594909667969	2	492.759081	983.503609	-0.02445	-1.2048E-05	0.090855	4.4769E-05	0.066405	3.2721E-05	492.7589743022962	19.143	0.5276	18.513	18.319	18.847	-0.6296					19	11	2	0	0	0	0.73802	1	479	479		37.812	0.78304	1	143640			56557	4587	37821	37836	63954	63954					0.011196954037473006
TAIIVAQH	8	Unmodified	_TAIIVAQH_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	427.3028259277344	2	426.750527	851.486502	-1.2448	-0.00053121	1.0861	0.00046348	-0.15871	-6.7728E-05	426.75038722735974	70.749	0.82814	70.825	70.435	71.263	0.076225					71	40	2	0	0	0	0.4196	1	6407	6407		42.474	11.971	1	305880	+		56558	20278	37822	37837	63955	63955					0.054818195886127796
TAIIVILLLV	10	Unmodified	_TAIIVILLLV_					0	0	0		nc|ENSG00000274391|P56180-4|TPTE;nc|ENSG00000274391|P56180-3|TPTE;nc|ENSG00000274391|P56180-2|TPTE;ENSG00000274391|ENST00000618007|TPTE	nc|ENSG00000274391|P56180-4|TPTE	nc|ENSG00000274391|P56180-4|TPTE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	534.372802734375	2	534.375561	1066.73657	0.28033	0.0001498	-2.6273	-0.0014039	-2.3469	-0.0012541	534.3740541824702	74.414	1.0855	74.459	73.969	75.054	0.04509					67	37	2	0	0	0	0.84874	1	7181	7181		18.324	5.3652	1	104390			56559	8996	37823	37838	63956	63956					0.20586984141505127
TAIKVTQH	8	Unmodified	_TAIKVTQH_					0	0	0		ENSG00000084774|ENST00000264705|CAD;ENST00000491891.1_1_2:27449097-27449208:+|nuORF	ENSG00000084774|ENST00000264705|CAD	ENSG00000084774|ENST00000264705|CAD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2605285644531	2	449.261259	896.507966	-1.6904	-0.00075944	0.29835	0.00013403	-1.3921	-0.0006254	449.2612435598619	72.23	1.3235	72.615	72.251	73.575	0.38582					73	31	3	0	0	0	0.87479	1	8070	8070		30.504	2.6214	1	1206100			56560	1526	37824	37839	63957	63957					0.055572046173210765
TAIKVTQH	8	Unmodified	_TAIKVTQH_					0	0	0		ENSG00000084774|ENST00000264705|CAD;ENST00000491891.1_1_2:27449097-27449208:+|nuORF	ENSG00000084774|ENST00000264705|CAD	ENSG00000084774|ENST00000264705|CAD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2607116699219	2	449.261259	896.507966	-0.10987	-4.936E-05	-1.2586	-0.00056544	-1.3685	-0.0006148	449.26053823357574	68.09	1.1232	68.638	68.16	69.283	0.54819					61	26	4	0	0	0	0.92457	1	7502	7502		47.916	5.5195	1	1909000			56561	1526	37824	37839	63958	63958					0.055572046173210765
TAIPIAAVL	9	Unmodified	_TAIPIAAVL_					0	0	0		ENSG00000006071|ENST00000389817|ABCC8;nc|ENSG00000006071|Q09428-2|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7767028808594	2	434.778754	867.542954	-0.97799	-0.00042521	2.2819	0.00099211	1.3039	0.0005669	434.7796012796187	43.693	1.006	44.143	43.436	44.442	0.45024					66	24	3	0	0	0	0.76996	1	3975	3975		33.516	1.5607	1	2290300			56562	693	37825	37840	63959	63959					0.10388447425270897
TAIPVLLF	8	Unmodified	_TAIPVLLF_					0	0	0		nc|ENSG00000160179|P45844-7|ABCG1;nc|ENSG00000160179|P45844-6|ABCG1;nc|ENSG00000160179|P45844-5|ABCG1;ENSG00000160179|ENST00000398449|ABCG1;nc|ENSG00000160179|P45844-3|ABCG1;nc|ENSG00000160179|P45844-2|ABCG1;nc|ENSG00000160179|P45844|ABCG1;ENST00000472587.5_1_21:43696971-43716499:+|nuORF;nc|ENSG00000160179|P45844-8|ABCG1;ENST00000496783.1_1_21:43708308-43714771:+|nuORF;nc|ENSG00000172350|Q9H172-4|ABCG4;nc|ENSG00000172350|Q9H172-3|ABCG4;nc|ENSG00000172350|Q9H172-2|ABCG4;ENSG00000172350|ENST00000619701|ABCG4	nc|ENSG00000160179|P45844-7|ABCG1	nc|ENSG00000160179|P45844-7|ABCG1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2711181640625	2	437.275847	872.537141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.461	1	55.461	54.961	55.961	0								0	0	0	0.29831	1	4709	4709		39.021	0	1				56563	5558	37826	37841	63960	63960					0.095773489136036
TAIQLTINTQP	11	Unmodified	_TAIQLTINTQP_					0	0	0			REV__nc|ENSG00000145147|O94813-3|SLIT2	REV__nc|ENSG00000145147|O94813-3|SLIT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.3338012695312	2	600.335153	1198.65575	-0.31484	-0.00018901	-1.5899	-0.00095445	-1.9047	-0.0011435	600.3340171924639	94.652	2.3297	94.652	93.284	95.614	0					94	54	2	0	0	0	0.68532	1	9374	9374		33.922	4.7721	1	234100	+		56564	19927	37827	37842	63961	63961					0.0643705136067183
TAIRHHVL	8	Unmodified	_TAIRHHVL_					0	0	0		ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.784423828125	2	473.782693	945.550834	0.85611	0.00040561	-0.33332	-0.00015792	0.52278	0.00024769	473.78229812116575	21.435	0.72224	21.503	21.23	21.953	0.068251					45	22	3	0	0	0	0.87064	2	563	563;572		38.806	4.9468	1	91763			56565	2066	37828	37843	63962;63963	63962					0.07588019465413254
TAIRHHVL	8	Unmodified	_TAIRHHVL_					0	0	0		ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.7822570800781	2	473.782693	945.550834	-0.30014	-0.0001422	0.74931	0.00035501	0.44918	0.00021281	473.7828602657225	21.786	0.75253	21.722	21.433	22.185	-0.063837					49	24	3	0	0	0	0.92457	1	652	652		47.916	10.104	1	95857			56566	2066	37828	37843	63964	63964					0.07588019465413254
TAISASRVQAI	11	Unmodified	_TAISASRVQAI_					0	0	0		chrX:15800329-15803688|14|14.57|0.6|4.6|+|0|TE_info:AluSc,AluSc_dup18659,Alu,SINE,donor,-,15800176,15800329|None,ZRSR2|2	chrX:15800329-15803688|14|14.57|0.6|4.6|+|0|TE_info:AluSc,AluSc_dup18659,Alu,SINE,donor,-,15800176,15800329|None,ZRSR2|2	chrX:15800329-15803688|14|14.57|0.6|4.6|+|0|TE_info:AluSc,AluSc_dup18659,Alu,SINE,donor,-,15800176,15800329|None,ZRSR2|2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	558.81982421875	2	558.822212	1115.62987	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.8	1	113.8	113.3	114.3	0								0	0	0	0.56276	1	11749	11749		22.58	2.5829	1				56567	547	37829	37844	63965	63965					0.07668201909041272
TAISLFYEL	9	Unmodified	_TAISLFYEL_					0	0	0		ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7838745117188	2	528.784233	1055.55391	2.0369	0.0010771	-2.0697	-0.0010944	-0.032727	-1.7305E-05	528.7830016729833	97.738	1.3991	98.123	97.681	99.08	0.38548					98	33	4	0	0	0	0.14386	2	11767	11754;11767		84.916	23.944	1	3308400			56568	6314	37830	37845	63966;63967	63967					0.0283580500890821
TAISLFYEL	9	Unmodified	_TAISLFYEL_					0	0	0		ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7840576171875	2	528.784233	1055.55391	1.4217	0.00075177	-1.4587	-0.00077133	-0.036988	-1.9559E-05	528.7833369070402	97.808	1.4372	98.199	97.803	99.241	0.39037					99	34	4	0	0	0	0.032438	2	11803	11803;11816		116.9	37.191	1	3659200			56569	6314	37830	37845	63968;63969	63968					0.0283580500890821
TAKALLTKGTG	11	Unmodified	_TAKALLTKGTG_					0	0	0			REV__ENSG00000141385|ENST00000269143|AFG3L2;REV__ENST00000427658.1_1_16:90057264-90060229:+|nuORF	REV__ENST00000427658.1_1_16:90057264-90060229:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8209228515625	2	530.821681	1059.62881	-0.074689	-3.9646E-05	-1.2098	-0.00064217	-1.2845	-0.00068182	530.8208962267565	82.295	1.0035	82.45	81.96	82.964	0.15474					78	23	4	0	0	0	0.70584	1	7887	7887		30.569	2.6866	1	1979200	+		56570	19679;26464	37831	37846	63970	63970					0.10137987540110771
TAKKGGSR	8	Unmodified	_TAKKGGSR_					0	0	0			REV__ENST00000325404.2_1_3:181431262-181431475:+|nuORF	REV__ENST00000325404.2_1_3:181431262-181431475:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.7393798828125	2	402.737951	803.46135	-0.073434	-2.9575E-05	3.6052	0.0014519	3.5317	0.0014224	402.7394481773092	35.645	1.7843	35.585	35.254	37.038	-0.060333					86	50	3	0	0	0	0.82658	1	1874	1874		21.96	1.4781	1	243330	+		56571	25062	37832	37847	63971	63971					0.051757647860426914
TAKKKKKR	8	Unmodified	_TAKKKKKR_					0	0	0		ENST00000428417.5_1_1:15546837-15546969:+|nuORF	ENST00000428417.5_1_1:15546837-15546969:+|nuORF	ENST00000428417.5_1_1:15546837-15546969:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30084228515625	2	494.342918	986.671283	-0.58693	-0.00029014	2.7426	0.0013558	2.1557	0.0010656	494.34362942512166	97.006	0.45213	97.237	96.999	97.451	0.23103					17	10	3	0	0	0	0.4196	1	10024	10024		4.3163	0	1	196770			56572	11594	37833	37848	63972	63972					0.1774142745903191
TAKKKKKR	8	Unmodified	_TAKKKKKR_					0	0	0		ENST00000428417.5_1_1:15546837-15546969:+|nuORF	ENST00000428417.5_1_1:15546837-15546969:+|nuORF	ENST00000428417.5_1_1:15546837-15546969:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.30084228515625	2	494.342918	986.671283	-0.58894	-0.00029114	0.70322	0.00034763	0.11428	5.6493E-05	494.3428416049067	97.293	0.32715	97.524	97.37	97.697	0.23103					11	7	2	0	0	0	0.4196	1	10054	10054		4.3163	0	1	99310			56573	11594	37833	37848	63973	63973					0.1774142745903191
TAKKKKKR	8	Unmodified	_TAKKKKKR_					0	0	0		ENST00000428417.5_1_1:15546837-15546969:+|nuORF	ENST00000428417.5_1_1:15546837-15546969:+|nuORF	ENST00000428417.5_1_1:15546837-15546969:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	494.342918	986.671283	-0.074724	-3.6939E-05	-5.3652	-0.0026523	-5.44	-0.0026892	494.34067999087614	97.387	0.34346	97.449	97.169	97.512	0.062225	-0.037542	-0.0058605	NaN	4.3163	12	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104560			56574	11594	37833	37848							0.1774142745903191
TAKKKKKR	8	Unmodified	_TAKKKKKR_					0	0	0		ENST00000428417.5_1_1:15546837-15546969:+|nuORF	ENST00000428417.5_1_1:15546837-15546969:+|nuORF	ENST00000428417.5_1_1:15546837-15546969:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	494.342918	986.671283	-0.67367	-0.00033302	4.5453	0.002247	3.8717	0.0019139	494.34442765689414	97.147	0.38077	97.195	96.87	97.251	0.048157	-0.021096	8.0417E-05	NaN	4.3163	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156060			56575	11594	37833	37848							0.1774142745903191
TAKLPVFH	8	Unmodified	_TAKLPVFH_					0	0	0		ENST00000523988.5_1_13:45969985-45970081:-|nuORF	ENST00000523988.5_1_13:45969985-45970081:-|nuORF	ENST00000523988.5_1_13:45969985-45970081:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79327392578125	2	456.76872	911.522887	-0.070896	-3.2383E-05	3.2132	0.0014677	3.1423	0.0014353	456.7695314887712	35.462	0.30253	35.71	35.554	35.856	0.24769					9	7	2	0	0	0	0.4196	1	2707	2707		30.504	3.7075	1	38262			56576	13207	37834	37849	63974	63974					0.06358696485335713
TAKLSLAGH	9	Unmodified	_TAKLSLAGH_					0	0	0			REV__ENST00000046640.7_1_17:3564142-3564217:+|nuORF	REV__ENST00000046640.7_1_17:3564142-3564217:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.2581787109375	2	449.261259	896.507966	0.2071	9.3041E-05	-2.3216	-0.001043	-2.1145	-0.00094997	449.2600548275645	70.792	0.56116	70.83	70.579	71.14	0.038055					50	29	2	0	0	0	0.71772	1	6777	6777		39.253	2.0937	1	227980	+		56577	24066	37835	37850	63975	63975					0.055572046173210765
TAKMLKSFLKA	11	Unmodified	_TAKMLKSFLKA_					0	0	0		nc|ENSG00000173083|Q9Y251-3|HPSE;nc|ENSG00000173083|Q9Y251-2|HPSE;ENSG00000173083|ENST00000311412|HPSE;nc|ENSG00000173083|Q9Y251-4|HPSE	nc|ENSG00000173083|Q9Y251-3|HPSE	nc|ENSG00000173083|Q9Y251-3|HPSE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.3715209960938	2	619.370484	1236.72641	-1.2262	-0.00075948	3.3126	0.0020517	2.0864	0.0012922	619.3724290211392	101.55	1.3094	101.7	101.32	102.63	0.15505					84	32	4	0	0	0	0.74763	1	10567	10567		22.58	1.6327	1	1786600			56578	6824	37836	37851	63976	63976					0.1175205314464165
TAKPLPVV	8	Unmodified	_TAKPLPVV_					0	0	0		ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.76678466796875	2	412.765646	823.516739	-1.7521	-0.00072319	3.4462	0.0014225	1.6941	0.00069928	412.7678061230934	49.11	3.161	49.11	47.72	50.881	0					177	80	4	0	0	0	0.81548	1	3842	3842		20.482	0	1	570960			56579	6667	37837	37852	63977	63977					0.09792178253815109
TAKPLPVV	8	Unmodified	_TAKPLPVV_					0	0	0		ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7670593261719	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.394	1	48.388	47.888	48.888	-0.0056419								0	0	0	0.29631	1	3993	3993		25.45	4.9683	1				56580	6667	37837	37852	63978	63978					0.09792178253815109
TAKPLPVV	8	Unmodified	_TAKPLPVV_					0	0	0		ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7668762207031	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.561	1	48.555	48.055	49.055	-0.0056419								0	0	0	0.30125	1	4016	4016		20.482	1.1219	1				56581	6667	37837	37852	63979	63979					0.09792178253815109
TAKPLPVV	8	Unmodified	_TAKPLPVV_					0	0	0		ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7665710449219	2	412.765646	823.516739	-0.80567	-0.00033255	3.6306	0.0014986	2.8249	0.001166	412.76743574244557	48.894	3.0852	48.869	47.646	50.731	-0.025112					171	74	4	0	0	0	0.85277	1	4118	4118		25.45	3.7478	1	642490			56582	6667	37837	37852	63980	63980					0.09792178253815109
TAKPLPVV	8	Unmodified	_TAKPLPVV_					0	0	0		ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7668151855469	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.969	1	48.969	48.469	49.469	0.00016785								0	0	0	0.29353	1	4103	4103		28.254	6.5519	1				56583	6667	37837	37852	63981	63981					0.09792178253815109
TAKPLPVV	8	Unmodified	_TAKPLPVV_					0	0	0		ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7667236328125	2	412.765646	823.516739	-1.8859	-0.00077844	3.9578	0.0016337	2.0719	0.00085522	412.7678129581843	48.855	3.3742	48.881	47.541	50.915	0.025574					176	94	2	0	0	0	0.85277	2	3777	3708;3777		26.796	8.0852	1	621000			56584	6667	37837	37852	63982;63983	63983					0.09792178253815109
TAKPLPVV	8	Unmodified	_TAKPLPVV_					0	0	0		ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7670593261719	2	412.765646	823.516739	0.2674	0.00011037	3.4179	0.0014108	3.6853	0.0015212	412.76694459903433	48.848	3.1893	48.886	47.742	50.932	0.037731					149	88	4	0	0	0	0.86288	2	3774	3762;3774		35.201	8.4046	1	734040			56585	6667	37837	37852	63984;63985	63985					0.09792178253815109
TAKPLPVV	8	Unmodified	_TAKPLPVV_					0	0	0		ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	ENSG00000171467|ENST00000361428|ZNF318	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7666931152344	2	412.765646	823.516739	-0.52852	-0.00021815	2.9286	0.0012088	2.4001	0.00099068	412.76723094642836	48.755	3.2946	48.662	47.534	50.828	-0.093178					192	86	3	0	0	0	0.85277	1	3714	3714		25.45	3.7478	1	594400			56586	6667	37837	37852	63986	63986					0.09792178253815109
TAKPRRSLRRR	11	Unmodified	_TAKPRRSLRRR_					0	0	0		ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2967224121094	3	466.29552	1395.86473	0.1167	5.4415E-05	-0.40684	-0.00018971	-0.29014	-0.00013529	466.29509632351835	16.701	0.29071	16.619	16.502	16.793	-0.0821					19	11	3	0	0	0	0.77205	1	164	164		17.167	7.9549	1	40077			56587	10359	37838	37853	63987	63987					0.1826335722796557
TAKPRRSLRRR	11	Unmodified	_TAKPRRSLRRR_					0	0	0		ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	466.29552	1395.86473	0.98091	0.00045739	-0.9626	-0.00044886	0.018308	8.5371E-06	466.29494651055313	16.506	0.27574	16.583	16.475	16.751	0.07715	-0.023228	-0.00098249	NaN	17.167	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44092			56588	10359	37838	37853							0.1826335722796557
TAKPRRSLRRR	11	Unmodified	_TAKPRRSLRRR_					0	0	0		ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	466.29552	1395.86473	-0.33343	-0.00015548	0.30189	0.00014077	-0.031542	-1.4708E-05	466.295599377718	16.725	0.32122	16.646	16.513	16.834	-0.079056	0.03967	0.00078639	NaN	17.167	21	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51127			56589	10359	37838	37853							0.1826335722796557
TAKPRRSLRRR	11	Unmodified	_TAKPRRSLRRR_					0	0	0		ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	ENST00000356166.10_3_16:30671065-30671251:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	466.29552	1395.86473	0.048468	2.2601E-05	-0.12237	-5.7062E-05	-0.073904	-3.4461E-05	466.2953536418054	16.517	0.15344	16.576	16.503	16.656	0.059269	-0.029695	0.0001929	NaN	17.167	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39759			56590	10359	37838	37853							0.1826335722796557
TAKPTLPP	8	Unmodified	_TAKPTLPP_					0	0	0			REV__ENSG00000147459|ENST00000276440|DOCK5	REV__ENSG00000147459|ENST00000276440|DOCK5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7461853027344	2	412.747453	823.480354	-0.18726	-7.729E-05	-2.5941	-0.0010707	-2.7813	-0.001148	412.74629807731793	85.159	3.9764	85.226	83.424	87.4	0.067261					139	91	3	0	0	0	0.82658	1	8531	8531		21.96	0.25755	1	1290300	+		56591	20072	37839	37854	63988	63988					0.06155301357091503
TAKPTLPP	8	Unmodified	_TAKPTLPP_					0	0	0			REV__ENSG00000147459|ENST00000276440|DOCK5	REV__ENSG00000147459|ENST00000276440|DOCK5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7462463378906	2	412.747453	823.480354	0.7641	0.00031538	-3.3391	-0.0013782	-2.575	-0.0010628	412.7458735732829	85.139	3.1869	85.067	83.891	87.078	-0.07196					136	73	4	0	0	0	0.82658	1	8735	8735		21.96	0.25755	1	1556000	+		56592	20072	37839	37854	63989	63989					0.06155301357091503
TAKPTLPP	8	Unmodified	_TAKPTLPP_					0	0	0			REV__ENSG00000147459|ENST00000276440|DOCK5	REV__ENSG00000147459|ENST00000276440|DOCK5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7462158203125	2	412.747453	823.480354	0.59258	0.00024459	-3.1125	-0.0012847	-2.5199	-0.0010401	412.7459816855853	84.982	2.6893	85.131	84.474	87.163	0.14857					120	62	4	0	0	0	0.82658	1	8290	8290		21.96	0.25755	1	1216600	+		56593	20072	37839	37854	63990	63990					0.06155301357091503
TAKQLHLRIQ	10	Unmodified	_TAKQLHLRIQ_					0	0	0		ENSG00000152503|ENST00000513154|TRIM36;nc|ENSG00000152503|Q9NQ86|TRIM36	ENSG00000152503|ENST00000513154|TRIM36	ENSG00000152503|ENST00000513154|TRIM36	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.366455078125	2	604.367121	1206.71969	0.90473	0.00054679	-2.0534	-0.001241	-1.1487	-0.00069423	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.82886	1	11388	11388		37.812	6.2817	1	105740000			56594	5179	37840	37855	63991	63991					0.12459876308275852
TAKQRVIN	8	Unmodified	_TAKQRVIN_					0	0	0			REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.2799987792969	2	465.279983	928.545414	0.34135	0.00015882	-0.21017	-9.7789E-05	0.13118	6.1036E-05	465.2797316035461	88.798	1.7872	88.849	88.394	90.181	0.050415					106	41	4	0	0	0	0.87064	1	9183	9183		29.15	7.1897	1	1568700	+		56595	23012	37841	37856	63992	63992					0.07828295882950442
TAKQRVIN	8	Unmodified	_TAKQRVIN_					0	0	0			REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.2802429199219	2	465.279983	928.545414	-1.728	-0.00080402	1.7949	0.00083513	0.066852	3.1105E-05	465.28067924301723	88.748	2.0508	88.921	88.498	90.549	0.17234					103	47	4	0	0	0	0.86677	1	8772	8772		27.882	2.3082	1	1028800	+		56596	23012	37841	37856	63993	63993					0.07828295882950442
TAKQRVIN	8	Unmodified	_TAKQRVIN_					0	0	0			REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.28009033203125	2	465.279983	928.545414	0.33843	0.00015746	-0.22201	-0.0001033	0.11641	5.4166E-05	465.2797412586998	88.673	1.4777	89.122	88.674	90.152	0.44893					74	35	3	0	0	0	0.87479	1	10475	10475		30.504	2.2494	1	982940	+		56597	23012	37841	37856	63994	63994					0.07828295882950442
TAKSHGRI	8	Unmodified	_TAKSHGRI_					0	0	0		ENSG00000185361|ENST00000327473|TNFAIP8L1	ENSG00000185361|ENST00000327473|TNFAIP8L1	ENSG00000185361|ENST00000327473|TNFAIP8L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25164794921875	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.87479	1	7611	7611		30.504	0	1	2823900			56598	7707	37842	37857	63995	63995					0.04839453677391248
TAKSLFLVLFL	11	Unmodified	_TAKSLFLVLFL_					0	0	0		ENSG00000282608|ENST00000241356|ADORA3	ENSG00000282608|ENST00000241356|ADORA3	ENSG00000282608|ENST00000241356|ADORA3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.92242431640625	3	417.928558	1250.76385	2.7173	0.0011356	2.793	0.0011673	5.5103	0.0023029	417.9297428030815	105.55	0.12611	105.52	105.45	105.58	-0.03714					4	2	2	0	0	0	0.17975	1	11638	11638		12.433	1.846	1	81282			56599	9053	37843	37858	63996	63996					0.14849467681892747
TAKSQGLQISA	11	Unmodified	_TAKSQGLQISA_					0	0	0		ENSG00000125207|ENST00000245255|PIWIL1;nc|ENSG00000125207|Q96J94-2|PIWIL1	ENSG00000125207|ENST00000245255|PIWIL1	ENSG00000125207|ENST00000245255|PIWIL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.306396484375	2	552.306395	1102.59824	0.26261	0.00014504	-0.18156	-0.00010027	0.081052	4.4766E-05	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.638	2	9300	9300;9470		40.058	2.3396	1	1950800			56600	3376	37844	37859	63997;63998	63997					0.051042091551153135
TAKVQQRL	8	Unmodified	_TAKVQQRL_					0	0	0		nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	nc|ENSG00000113569|O75694-2|NUP155	nc|ENSG00000113569|O75694-2|NUP155	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2876892089844	2	472.287808	942.561064	-0.10777	-5.0899E-05	0.78283	0.00036972	0.67506	0.00031882	472.28822632697705	99.434	2.1055	99.484	98.705	100.81	0.049828					105	48	3	0	0	0	0.85277	1	10560	10560		25.45	1.2474	1	555450			56601	2728	37845	37860	63999	63999					0.08748582400005489
TALALIGKP	9	Unmodified	_TALALIGKP_					0	0	0		nc|ENSG00000144452|Q86UK0-2|ABCA12;ENSG00000144452|ENST00000272895|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7869567871094	2	442.284203	882.553853	-0.11278	-4.988E-05	1.2721	0.00056262	1.1593	0.00051274	442.2829804968431	40.563	0.14132	40.515	40.439	40.58	-0.04789					7	5	2	0	0	0	0.20789	1	2570	2570		17.365	0	1	56350			56602	4708	37846	37861	64000	64000					0.10787849799567084
TALCQKLK	8	Unmodified	_TALCQKLK_					0	0	0		ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF	ENSG00000139687|ENST00000267163|RB1	ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.7688903808594	2	452.767863	903.521173	-0.29923	-0.00013548	1.5988	0.00072387	1.2995	0.00058839	452.76847785034585	29.879	0.94346	29.836	29.448	30.392	-0.043095					34	22	2	0	0	0	0.87479	1	1595	1595		30.504	1.3541	1	69345			56603	4390	37847	37862	64001	64001					0.065553194050608
TALGPVPKGYT	11	Unmodified	_TALGPVPKGYT_					0	0	0			REV__nc|ENSG00000126838|P20742-2|PZP	REV__nc|ENSG00000126838|P20742-2|PZP	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3075561523438	2	552.308406	1102.60226	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.985	1	81.128	80.628	81.628	0.14352								0	0	0	0.56276	1	7743	7743		35.152	2.3396	1		+		56604	18715	37848	37863	64002	64002					0.055062986488110255
TALGRESRF	9	Unmodified	_TALGRESRF_					0	0	0		ENST00000498018.1_1_3:195456666-195456747:+|nuORF	ENST00000498018.1_1_3:195456666-195456747:+|nuORF	ENST00000498018.1_1_3:195456666-195456747:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.810302734375	2	518.780348	1035.54614	1.9396	0.0010062	-0.72265	-0.0003749	1.217	0.00063134	518.7803183538182	98.376	0.33201	98.737	98.483	98.815	0.36137					10	7	2	0	0	0	0.20789	1	11842	11842		47.657	3.2801	1	55286			56605	12818	37849	37864	64003	64003					0.029790905319941885
TALGTQQKL	9	Unmodified	_TALGTQQKL_					0	0	0			REV__ENSG00000080200|ENST00000389622|CRYBG3	REV__ENSG00000080200|ENST00000389622|CRYBG3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.2804260253906	2	480.279649	958.544745	-1.6792	-0.00080648	4.2937	0.0020622	2.6145	0.0012557	480.2815170971303	99.526	0.96476	99.712	99.198	100.16	0.18582					47	22	3	0	0	0	0.77696	1	10289	10289		31.53	2.3803	1	356250	+		56606	16797	37850	37865	64004	64004					0.06381456443239131
TALHPPRKR	9	Unmodified	_TALHPPRKR_					0	0	0		ENST00000216297.6_1_14:21820824-21820908:-|nuORF	ENST00000216297.6_1_14:21820824-21820908:-|nuORF	ENST00000216297.6_1_14:21820824-21820908:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3268432617188	2	538.327799	1074.64105	1.3454	0.00072427	-3.0293	-0.0016307	-1.6839	-0.00090648	538.3260218082069	100.6	2.6544	100.9	100.26	102.91	0.2999					222	70	6	0	0	0	0.78058	1	12256	12256		30.504	1.3541	1	18713000			56607	9134	37851	37866	64005	64005					0.1067106879381754
TALHYVARQR	10	Unmodified	_TALHYVARQR_					0	0	0			REV__ENSG00000057468|ENST00000263187|MSH4	REV__ENSG00000057468|ENST00000263187|MSH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.565185546875	3	405.563273	1213.66799	1.5319	0.00062128	2.1099	0.00085571	3.6418	0.001477	405.5640229476652	63.354	1.2765	63.381	62.714	63.991	0.027142					136	53	3	0	0	0	0.8651	1	5914	5914		18.531	0	1	245170	+		56608	16427	37852	37867	64006	64006					0.06970132614355862
TALKKYVL	8	Unmodified	_TALKKYVL_					0	0	0		nc|ENSG00000127483|Q5SSJ5-3|HP1BP3;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;ENSG00000127483|ENST00000438032|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.29937744140625	2	468.299853	934.585153	0.09215	4.3154E-05	-0.34942	-0.00016363	-0.25727	-0.00012048	468.29958952600964	38.514	0.81402	38.486	38.129	38.943	-0.027843					33	18	2	0	0	0	0.89962	2	2598	2598;2621		42.396	10.441	1	152170			56609	3500	37853	37868	64007;64008	64007					0.11524422833656445
TALKKYVL	8	Unmodified	_TALKKYVL_					0	0	0		nc|ENSG00000127483|Q5SSJ5-3|HP1BP3;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;ENSG00000127483|ENST00000438032|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.3000793457031	2	468.299853	934.585153	-1.1073	-0.00051857	0.7259	0.00033994	-0.38144	-0.00017863	468.3000473819582	38.414	0.83413	38.364	38.072	38.906	-0.050369					30	18	2	0	0	0	0.88944	1	2700	2700		57.811	15.337	1	163620			56610	3500	37853	37868	64009	64009					0.11524422833656445
TALKLIKCVNI	11	Unmodified	_TALKLIKCVNI_					0	0	0		ENST00000519877.5_1_14:102718183-102749821:-|nuORF;ENST00000519569.5_1_14:102718183-102771389:-|nuORF	ENST00000519877.5_1_14:102718183-102749821:-|nuORF	ENST00000519877.5_1_14:102718183-102749821:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25811767578125	3	405.921298	1214.74206	-0.83282	-0.00033806	4.1597	0.0016885	3.3269	0.0013505	406.2575538144286	57.155	0.21799	57.129	57.048	57.266	-0.026108					20	11	2	0	0	0	0.72892	1	4841	4841		26.75	0.68632	1	157660			56611	13138	37854	37869	64010	64010					0.14328339661665268
TALLEALPR	9	Unmodified	_TALLEALPR_					0	0	0			REV__nc|ENSG00000140691|Q96C12-3|ARMC5	REV__nc|ENSG00000140691|Q96C12-3|ARMC5	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.30023193359375	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.926	1	56.926	56.426	57.426	0								0	0	0	0.29475	1	4875	4875		32.812	7.2384	1		+		56612	19638	37855	37870	64011	64011					0.08914333339942004
TALLEALPR	9	Unmodified	_TALLEALPR_					0	0	0			REV__nc|ENSG00000140691|Q96C12-3|ARMC5	REV__nc|ENSG00000140691|Q96C12-3|ARMC5	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.29925537109375	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.853	1	59.853	59.353	60.353	0								0	0	0	0.32758	1	5224	5224		20.947	0	1		+		56613	19638	37855	37870	64012	64012					0.08914333339942004
TALLLHCY	8	Unmodified	_TALLLHCY_					0	0	0		ENSG00000181656|ENST00000315033|GPR88	ENSG00000181656|ENST00000315033|GPR88	ENSG00000181656|ENST00000315033|GPR88	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.24627685546875	2	467.246763	932.478974	-0.27992	-0.00013079	-1.5685	-0.00073287	-1.8484	-0.00086366	467.24638780254423	52.365	1.4779	53.032	52.271	53.749	0.66729					46	35	2	0	0	0	0.9159	1	5337	5337		44.531	2.1349	1	1794800			56614	7398	37856	37871	64013	64013					0.010033439966832702
TALLLPIL	8	Unmodified	_TALLLPIL_					0	0	0		nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1;ENST00000555607.1_1_14:45431624-45475488:+|nuORF;nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1;nc|ENSG00000198718|Q9Y4F4|TOGARAM1;ENSG00000198718|ENST00000361462|TOGARAM1;ENST00000555945.1_1_14:45431624-45465140:+|nuORF	nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1	nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.3028259277344	2	427.291497	852.568441	0.43741	0.0001869	-3.2859	-0.001404	-2.8484	-0.0012171	427.289944400695	67.874	0.3326	68.002	67.829	68.161	0.12748					16	12	2	0	0	0	0.4196	1	6064	6064		8.2313	4.2461	1	78345			56615	8312	37857	37872	64014	64014					0.13625921947721054
TALLRKLKQQ	10	Unmodified	_TALLRKLKQQ_					0	0	0		ENST00000498735.1_1_1:70771620-70790623:-|nuORF;nc|ENSG00000118454|Q8N6S4-2|ANKRD13C;ENSG00000118454|ENST00000370944|ANKRD13C	ENST00000498735.1_1_1:70771620-70790623:-|nuORF	ENST00000498735.1_1_1:70771620-70790623:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.25970458984375	3	400.25919	1197.75574	-1.9387	-0.00077597	-1.1905	-0.00047649	-3.1291	-0.0012525	400.5933055953263	15.234	0.10254	15.283	15.201	15.303	0.04908					6	3	2	0	0	0	0.85259	1	26	26		20.03	0.7678	1	26406			56616	3030	37858	37873	64015	64015					0.16477333485136114
TALLSLVLMA	10	Unmodified	_TALLSLVLMA_					0	0	0		ENSG00000004939|ENST00000262418|SLC4A1;nc|ENSG00000004939|P02730-2|SLC4A1;ENST00000472204.1_1_7:150769094-150771461:+|nuORF;nc|ENSG00000164889|P04920-2|SLC4A2;nc|ENSG00000164889|P04920-3|SLC4A2;ENSG00000164889|ENST00000413384|SLC4A2	ENSG00000004939|ENST00000262418|SLC4A1;nc|ENSG00000164889|P04920-2|SLC4A2	nc|ENSG00000164889|P04920-2|SLC4A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.313720703125	2	516.312103	1030.60965	3.1012	0.0016012	0.56309	0.00029073	3.6643	0.0018919	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.86452	1	13022	13022		30.504	2.2494	1	1162600			56617	668;6017	37859	37874	64016	64016					0.09557314924882121
TALMRLLS	8	Unmodified	_TALMRLLS_					0	0	0			REV__ENST00000502083.2_1_8:22864978-22865296:-|nuORF	REV__ENST00000502083.2_1_8:22864978-22865296:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.7679748535156	2	452.767863	903.521173	-2.0307	-0.00091944	3.8225	0.0017307	1.7918	0.00081129	452.7693705732477	29.816	0.72486	29.816	29.483	30.208	0					42	24	2	0	0	0	0.87479	1	1307	1307		30.504	5.0535	1	85883	+		56618	27813	37860	37875	64017	64017					0.06555319405072169
TALNRGKG	8	Unmodified	_TALNRGKG_					0	0	0		nc|ENSG00000161847|Q8IY67|RAVER1;ENST00000592208.5_1_19:10433104-10439782:-|nuORF;nc|ENSG00000161847|Q8IY67-2|RAVER1;ENSG00000161847|ENST00000617231|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.7397155761719	2	408.737951	815.46135	-0.047648	-1.9476E-05	4.4202	0.0018067	4.3725	0.0017872	408.73963408946304	36.955	2.5653	36.931	36.681	39.246	-0.023975					119	58	3	0	0	0	0.90465	1	2399	2399		40.573	5.3719	1	457600			56619	15042	37861	37876	64018	64018					0.04623764786049378
TALNRGKG	8	Unmodified	_TALNRGKG_					0	0	0		nc|ENSG00000161847|Q8IY67|RAVER1;ENST00000592208.5_1_19:10433104-10439782:-|nuORF;nc|ENSG00000161847|Q8IY67-2|RAVER1;ENSG00000161847|ENST00000617231|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7394714355469	2	408.737951	815.46135	0.14715	6.0146E-05	4.0233	0.0016445	4.1704	0.0017046	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.87922	4	1945	1849;1868;1915;1945		42.474	6.6555	1	1448600			56620	15042	37861	37876	64019;64020;64021;64022	64022					0.04623764786049378
TALNRGKG	8	Unmodified	_TALNRGKG_					0	0	0		nc|ENSG00000161847|Q8IY67|RAVER1;ENST00000592208.5_1_19:10433104-10439782:-|nuORF;nc|ENSG00000161847|Q8IY67-2|RAVER1;ENSG00000161847|ENST00000617231|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.73944091796875	2	408.737951	815.46135	-0.071529	-2.9237E-05	4.315	0.0017637	4.2434	0.0017344	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.90465	5	1956	1868;1879;1889;1932;1956		47.916	5.5195	1	1654100			56621	15042	37861	37876	64023;64024;64025;64026;64027	64027					0.04623764786049378
TALNRGKG	8	Unmodified	_TALNRGKG_					0	0	0		nc|ENSG00000161847|Q8IY67|RAVER1;ENST00000592208.5_1_19:10433104-10439782:-|nuORF;nc|ENSG00000161847|Q8IY67-2|RAVER1;ENSG00000161847|ENST00000617231|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7392578125	2	408.737951	815.46135	-0.23818	-9.7354E-05	3.6511	0.0014923	3.4129	0.001395	408.739262889798	40.316	2.2785	40.268	40.01	42.289	-0.047886					186	74	3	0	0	0	0.89962	1	2529	2529		38.806	1.7777	1	4578200			56622	15042	37861	37876	64028	64028					0.04623764786049378
TALNRGKG	8	Unmodified	_TALNRGKG_					0	0	0		nc|ENSG00000161847|Q8IY67|RAVER1;ENST00000592208.5_1_19:10433104-10439782:-|nuORF;nc|ENSG00000161847|Q8IY67-2|RAVER1;ENSG00000161847|ENST00000617231|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.73980712890625	2	408.737951	815.46135	1.5082	0.00061648	2.9117	0.0011901	4.4199	0.0018066	408.739095634202	34.891	2.006	35.101	34.812	36.818	0.21003					151	50	4	0	0	0	0.91005	6	2671	2601;2671;2697;2719;2756;2771		55.504	14.932	1	5089300			56623	15042	37861	37876	64029;64030;64031;64032;64033;64034	64030					0.04623764786049378
TALNRGKG	8	Unmodified	_TALNRGKG_					0	0	0		nc|ENSG00000161847|Q8IY67|RAVER1;ENST00000592208.5_1_19:10433104-10439782:-|nuORF;nc|ENSG00000161847|Q8IY67-2|RAVER1;ENSG00000161847|ENST00000617231|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	nc|ENSG00000161847|Q8IY67|RAVER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.7400817871094	2	408.737951	815.46135	1.2573	0.00051389	3.1459	0.0012858	4.4031	0.0017997	408.73920372763826	34.848	1.9965	35.229	34.977	36.973	0.3812					122	50	4	0	0	0	0.884	9	2732	2612;2624;2636;2648;2672;2708;2732;2756;2768		57.811	15.337	1	5754800			56624	15042	37861	37876	64035;64036;64037;64038;64039;64040;64041;64042;64043	64041					0.04623764786049378
TALPLLLI	8	Unmodified	_TALPLLLI_					0	0	0			REV__ENSG00000100385|ENST00000216223|IL2RB	REV__ENSG00000100385|ENST00000216223|IL2RB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.30279541015625	2	427.291497	852.568441	0.43913	0.00018763	-4.1792	-0.0017857	-3.7401	-0.0015981	427.28957021388396	68.087	0.11543	68.215	68.133	68.249	0.12748					7	4	2	0	0	0	0.4196	1	6108	6108		8.2313	0	1	42942	+		56625	17186	37862	37877	64044	64044					0.13625921947721054
TALPLRTPLQR	11	Unmodified	_TALPLRTPLQR_					0	0	0		ENSG00000204713|ENST00000377199|TRIM27	ENSG00000204713|ENST00000377199|TRIM27	ENSG00000204713|ENST00000377199|TRIM27	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.593017578125	3	422.594461	1264.76155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.198	1	55.172	54.672	55.672	-0.025955								0	0	0	0.56276	1	5014	5014		17.833	0	1				56626	8484	37863	37878	64045	64045					0.13976431996798055
TALPQLLL	8	Unmodified	_TALPQLLL_					0	0	0		nc|ENSG00000174038|Q5VYM1-3|SPATA31G1;nc|ENSG00000174038|Q5VYM1-2|SPATA31G1;ENSG00000174038|ENST00000312292|C9orf131;ENSG00000182752|ENST00000328252|PAPPA	nc|ENSG00000174038|Q5VYM1-3|SPATA31G1	nc|ENSG00000174038|Q5VYM1-3|SPATA31G1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7796936035156	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.86288	1	3806	3806		26.796	0	1	6567600			56627	6905	37864	37879	64046	64046					0.10388447425293634
TALPQTWH	8	Unmodified	_TALPQTWH_					0	0	0			REV__ENST00000556553.5_1_14:88851807-88857770:+|nuORF	REV__ENST00000556553.5_1_14:88851807-88857770:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.24688720703125	2	477.245609	952.476666	-0.88369	-0.00042174	2.6697	0.0012741	1.786	0.00085235	477.24693641483543	64.828	2.6891	65.382	64.729	67.418	0.55386					152	75	5	0	0	0	0.89962	1	7043	7043		38.806	3.1879	1	2295100	+		56628	28701	37865	37880	64047	64047					-0.0014736841677631674
TALQALRH	8	Unmodified	_TALQALRH_					0	0	0		ENSG00000159792|ENST00000291041|PSKH1	ENSG00000159792|ENST00000291041|PSKH1	ENSG00000159792|ENST00000291041|PSKH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.26605224609375	2	455.266876	908.519199	-1.2616	-0.00057436	-0.28674	-0.00013054	-1.5483	-0.0007049	455.2666275399711	38.633	1.2081	38.975	38.537	39.745	0.34187					55	28	4	0	0	0	0.9295	1	3195	3195		55.504	14.932	1	605190			56629	5549	37866	37881	64048	64048					0.061280267114511844
TALQALRH	8	Unmodified	_TALQALRH_					0	0	0		ENSG00000159792|ENST00000291041|PSKH1	ENSG00000159792|ENST00000291041|PSKH1	ENSG00000159792|ENST00000291041|PSKH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.2661437988281	2	455.266876	908.519199	-0.70894	-0.00032276	-0.74748	-0.0003403	-1.4564	-0.00066306	455.26644591079787	38.513	1.1212	39.035	38.593	39.714	0.52235					55	26	3	0	0	0	0.79403	1	3195	3195		63.306	15.391	1	859060			56630	5549	37866	37881	64049	64049					0.061280267114511844
TALSLGVF	8	Unmodified	_TALSLGVF_					0	0	0			REV__ENSG00000206077|ENST00000508859|ZDHHC11B	REV__ENSG00000206077|ENST00000508859|ZDHHC11B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2330017089844	2	404.234179	806.453805	-1.2204	-0.00049332	-1.5408	-0.00062286	-2.7612	-0.0011162	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.87276	1	8098	8098		29.842	1.5873	1	2752600	+		56631	23585	37867	37882	64050	64050					0.04283612465758324
TALSLGVF	8	Unmodified	_TALSLGVF_					0	0	0			REV__ENSG00000206077|ENST00000508859|ZDHHC11B	REV__ENSG00000206077|ENST00000508859|ZDHHC11B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2327575683594	2	404.234179	806.453805	-1.8251	-0.00073778	-1.1309	-0.00045714	-2.956	-0.0011949	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.86791	1	8266	8266		28.254	0	1	3315300	+		56632	23585	37867	37882	64051	64051					0.04283612465758324
TALTKPRGN	9	Unmodified	_TALTKPRGN_					0	0	0		ENST00000296785.7_1_5:72858732-72861025:-|nuORF	ENST00000296785.7_1_5:72858732-72861025:-|nuORF	ENST00000296785.7_1_5:72858732-72861025:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2777404785156	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.47272	1	10067	10067		53.351	2.1588	1	5642300			56633	9749	37868	37883	64052	64052					0.060319920203255606
TALTKPRGN	9	Unmodified	_TALTKPRGN_					0	0	0		ENST00000296785.7_1_5:72858732-72861025:-|nuORF	ENST00000296785.7_1_5:72858732-72861025:-|nuORF	ENST00000296785.7_1_5:72858732-72861025:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27740478515625	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.78983	1	9796	9796		27.882	1.1893	1	6350300			56634	9749	37868	37883	64053	64053					0.060319920203255606
TALTLRSKSMT	11	Unmodified	_TALTLRSKSMT_					0	0	0		nc|ENSG00000162105|Q9UPX8-4|SHANK2;nc|ENSG00000162105|Q9UPX8-1|SHANK2;ENSG00000162105|ENST00000601538|SHANK2;nc|ENSG00000162105|Q9UPX8-2|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	nc|ENSG00000162105|Q9UPX8-4|SHANK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.8945007324219	3	403.560429	1207.65946	-0.38238	-0.00015431	-0.60845	-0.00024555	-0.99083	-0.00039986	403.56005878614496	22.792	0.9348	22.733	22.419	23.353	-0.058668					76	31	3	0	0	0	0.70278	1	731	731		31.068	1.5174	1	169720			56635	5669	37869	37884	64054	64054					0.0639339786284836
TALVLVPGV	9	Unmodified	_TALVLVPGV_					0	0	0			REV__ENST00000395505.6_1_9:95640207-95640279:-|nuORF	REV__ENST00000395505.6_1_9:95640207-95640279:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801818847656	2	434.778754	867.542954	0.12745	5.5413E-05	3.4254	0.0014893	3.5528	0.0015447	434.7800727481765	33.235	0.77096	33.345	33.052	33.823	0.10991					78	32	3	0	0	0	0.7932	1	1642	1642		26.796	1.3459	1	320750	+		56636	26113	37870	37885	64055	64055					0.10388447425282266
TALVLVPGV	9	Unmodified	_TALVLVPGV_					0	0	0			REV__ENST00000395505.6_1_9:95640207-95640279:-|nuORF	REV__ENST00000395505.6_1_9:95640207-95640279:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7795104980469	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.76996	1	3801	3801		33.516	5.2613	1	6824500	+		56637	26113	37870	37885	64056	64056					0.10388447425282266
TALVPLDL	8	Unmodified	_TALVPLDL_					0	0	0		nc|ENSG00000075415|Q00325|SLC25A3;ENST00000546766.5_1_12:98989167-98989365:+|nuORF	nc|ENSG00000075415|Q00325|SLC25A3	nc|ENSG00000075415|Q00325|SLC25A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.25408935546875	2	421.255111	840.49567	-0.18708	-7.8807E-05	-2.5351	-0.0010679	-2.7222	-0.0011467	421.25387987106194	84.393	1.9611	84.46	83.811	85.772	0.067177					92	44	3	0	0	0	0.85277	2	8441	8441;8485		31.955	0	1	712040			56638	14780	37871	37886	64057;64058	64057					0.06904168154278523
TALYTITG	8	Unmodified	_TALYTITG_					0	0	0		nc|ENSG00000100170|P13866-2|SLC5A1;ENSG00000100170|ENST00000266088|SLC5A1	nc|ENSG00000100170|P13866-2|SLC5A1	nc|ENSG00000100170|P13866-2|SLC5A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2279968261719	2	420.229094	838.443634	-1.7925	-0.00075327	-1.0357	-0.00043521	-2.8282	-0.0011885	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.85277	1	7701	7701		25.45	0	1	831720			56639	1805	37872	37887	64059	64059					0.017950047405292935
TAMDVVYAL	9	Unmodified	_TAMDVVYAL_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7494812011719	2	491.749336	981.484119	-0.71539	-0.00035179	0.66077	0.00032493	-0.054622	-2.686E-05	491.749507079354	81.844	1.6982	82.27	81.711	83.409	0.42646					108	41	4	0	0	0	0.021904	4	9428	9417;9428;9440;9452		123.99	55.504	1	8394300			56640	5474	37873	37888	64060;64061;64062;64063	64061					-0.007363969313587404
TAMDVVYAL	9	Unmodified	_TAMDVVYAL_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.749267578125	2	491.749336	981.484119	-0.10812	-5.3166E-05	-0.014588	-7.1734E-06	-0.1227	-6.0339E-05	491.7492063012243	81.789	1.6129	82.288	81.869	83.482	0.49966					113	39	4	0	0	0	0.021904	3	9449	9449;9461;9473		123.99	47.142	1	9769300			56641	5474	37873	37888	64064;64065;64066	64064					-0.007363969313587404
TAMKIRRVG	9	Unmodified	_TAMKIRRVG_					0	0	0			REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3136596679688	2	516.310761	1030.60697	1.9037	0.0009829	4.3859	0.0022645	6.2896	0.0032474	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.7932	1	11864	11864		24.203	2.2429	1	22616000	+		56642	20170	37874	37889	64067	64067					0.0928890431059699
TANQPGKEKLN	11	Unmodified	_TANQPGKEKLN_					0	0	0			REV__nc|ENSG00000171566|O43660-2|PLRG1	REV__nc|ENSG00000171566|O43660-2|PLRG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	600.3236694335938	2	600.322576	1198.6306	-0.31424	-0.00018865	2.506	0.0015044	2.1917	0.0013158	600.3239232802032	111.52	1.0307	111.55	111.06	112.09	0.030388					113	40	4	0	0	0	0.70584	1	12215	12215		30.569	1.3988	1	160730	+		56643	21751	37875	37890	64068	64068					0.0392299655811712
TANQPGKEKLN	11	Unmodified	_TANQPGKEKLN_					0	0	0			REV__nc|ENSG00000171566|O43660-2|PLRG1	REV__nc|ENSG00000171566|O43660-2|PLRG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	600.322576	1198.6306	-0.53429	-0.00032075	0.68688	0.00041235	0.15259	9.1605E-05	600.3227618320802	111.98	0.13751	111.92	111.86	112	-0.063889	0.35208	-0.002	NaN	30.569	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8885.8	+		56644	21751	37875	37890							0.0392299655811712
TANQPGKEKLN	11	Unmodified	_TANQPGKEKLN_					0	0	0			REV__nc|ENSG00000171566|O43660-2|PLRG1	REV__nc|ENSG00000171566|O43660-2|PLRG1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	600.322576	1198.6306	0.90078	0.00054076	2.2834	0.0013708	3.1842	0.0019115	600.3237666493952	111.48	0.70912	111.55	111.07	111.78	0.069542	-0.022228	-8.3151E-05	NaN	30.569	47	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63401	+		56645	21751	37875	37890							0.0392299655811712
TANQPGKEKLN	11	Unmodified	_TANQPGKEKLN_					0	0	0			REV__nc|ENSG00000171566|O43660-2|PLRG1	REV__nc|ENSG00000171566|O43660-2|PLRG1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	600.322576	1198.6306	-1.2885	-0.0007735	2.9189	0.0017523	1.6304	0.00097876	600.3241231116239	111.38	0.85126	111.36	111	111.85	-0.019882	-0.20832	0.00067982	NaN	30.569	46	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110410	+		56646	21751	37875	37890							0.0392299655811712
TANTRGNA	8	Unmodified	_TANTRGNA_					0	0	0		nc|ENSG00000143537|Q13444-13|ADAM15;nc|ENSG00000143537|Q13444-10|ADAM15;nc|ENSG00000143537|Q13444-9|ADAM15;nc|ENSG00000143537|Q13444-8|ADAM15;nc|ENSG00000143537|Q13444-2|ADAM15;nc|ENSG00000143537|Q13444-7|ADAM15;nc|ENSG00000143537|Q13444-6|ADAM15;nc|ENSG00000143537|Q13444-12|ADAM15;ENST00000461564.6_1_1:155023817-155033989:+|nuORF;nc|ENSG00000143537|Q13444-5|ADAM15;nc|ENSG00000143537|Q13444-4|ADAM15;ENST00000527418.5_1_1:155025082-155034975:+|nuORF;nc|ENSG00000143537|Q13444-3|ADAM15;ENSG00000143537|ENST00000356955|ADAM15;nc|ENSG00000143537|Q13444-11|ADAM15	nc|ENSG00000143537|Q13444-13|ADAM15	nc|ENSG00000143537|Q13444-13|ADAM15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.70391845703125	2	402.701566	803.388579	2.8107	0.0011319	2.5005	0.0010069	5.3112	0.0021388	402.7025728416904	25.135	0.51849	25.098	24.93	25.448	-0.037178					23	14	2	0	0	0	0.81184	1	992	992		19.997	1.6724	1	42731			56647	4642	37876	37891	64069	64069					-0.020979890073817842
TANVLKKT	8	Unmodified	_TANVLKKT_					0	0	0		ENST00000381652.3_1_9:4985473-5022055:+|nuORF	ENST00000381652.3_1_9:4985473-5022055:+|nuORF	ENST00000381652.3_1_9:4985473-5022055:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.77117919921875	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.80308	1	2206	2206		16.473	1.6083	1	1151500			56648	10959	37877	37892	64070	64070					0.08654375277126292
TANVLKKT	8	Unmodified	_TANVLKKT_					0	0	0		ENST00000381652.3_1_9:4985473-5022055:+|nuORF	ENST00000381652.3_1_9:4985473-5022055:+|nuORF	ENST00000381652.3_1_9:4985473-5022055:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7710266113281	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.84696	1	3047	3047		10.866	0.6003	1	13476000			56649	10959	37877	37892	64071	64071					0.08654375277126292
TAPAPAASN	9	Unmodified	_TAPAPAASN_					0	0	0			REV__nc|ENSG00000272391|A8CG34|POM121C	REV__nc|ENSG00000272391|A8CG34|POM121C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2010498046875	2	400.200867	798.387182	1.235	0.00049424	-3.6984	-0.0014801	-2.4635	-0.00098588	400.2007500976596	65.261	1.216	65.647	64.776	65.992	0.38615					58	31	3	0	0	0	0.67345	1	7050	7050		42.396	0	1	302440	+		56650	30262	37878	37893	64072	64072					-0.020076230961535657
TAPGARKVN	9	Unmodified	_TAPGARKVN_					0	0	0		ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.26422119140625	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.7932	2	7617	7617;7656		26.693	1.2427	1	2957200			56651	10002	37879	37894	64073;64074	64073					0.05435722848858404
TAPGARKVN	9	Unmodified	_TAPGARKVN_					0	0	0		ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2640686035156	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.7932	3	8099	8099;8111;8171		26.693	1.2427	1	4511100			56652	10002	37879	37894	64075;64076;64077	64075					0.05435722848858404
TAPGARKVN	9	Unmodified	_TAPGARKVN_					0	0	0		ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2639465332031	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.76764	1	8378	8378		34.173	5.023	1	4885100			56653	10002	37879	37894	64078	64078					0.05435722848858404
TAPGARKVN	9	Unmodified	_TAPGARKVN_					0	0	0		ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2640380859375	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.76764	2	8220	8196;8220		34.173	3.6689	1	4814400			56654	10002	37879	37894	64079;64080	64080					0.05435722848858404
TAPGARKVN	9	Unmodified	_TAPGARKVN_					0	0	0		ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2640686035156	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.76764	2	7850	7850;7967		34.173	1.0262	1	4732500			56655	10002	37879	37894	64081;64082	64081					0.05435722848858404
TAPGARKVN	9	Unmodified	_TAPGARKVN_					0	0	0		ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2640380859375	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.7932	1	7906	7906		26.693	1.1189	1	4597500			56656	10002	37879	37894	64083	64083					0.05435722848858404
TAPGARKVN	9	Unmodified	_TAPGARKVN_					0	0	0		ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	ENST00000318037.3_1_3:196230422-196230593:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26397705078125	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.58668	5	7989	7781;7817;7829;7841;7989		47.657	12.039	1	4061400			56657	10002	37879	37894	64084;64085;64086;64087;64088	64088					0.05435722848858404
TAPGLQILY	9	Unmodified	_TAPGLQILY_					0	0	0		ENST00000373095.5_1_9:130703123-130703396:-|nuORF	ENST00000373095.5_1_9:130703123-130703396:-|nuORF	ENST00000373095.5_1_9:130703123-130703396:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.28125	2	488.279118	974.543683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.932	1	62.486	61.986	62.986	0.55386								0	0	0	0.29134	1	6636	6636		34.173	6.2903	1				56658	10729	37880	37895	64089	64089					0.05539242074326012
TAPGPAPGQL	10	Unmodified	_TAPGPAPGQL_					0	0	0			REV__ENSG00000105610|ENST00000264834|KLF1	REV__ENSG00000105610|ENST00000264834|KLF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.7449645996094	2	454.745442	907.476331	2.7644	0.0012571	-3.8708	-0.0017602	-1.1064	-0.00050315	454.74355172728065	103.83	1.5253	103.79	103.16	104.69	-0.043755					91	36	4	0	0	0	0.86218	1	11399	11399		32.812	0.85756	1	836250	+		56659	17555	37881	37896	64090	64090					0.018892118633857535
TAPPRPIT	8	Unmodified	_TAPPRPIT_					0	0	0		ENST00000343938.8_1_1:1263308-1263773:+|nuORF	ENST00000343938.8_1_1:1263308-1263773:+|nuORF	ENST00000343938.8_1_1:1263308-1263773:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.6308898925781	2	426.750527	851.486502	-0.23834	-0.00010171	-1.2963	-0.00055321	-1.5347	-0.00065492	426.7498927472976	83.057	1.7072	83.488	82.754	84.461	0.43108					53	40	2	0	0	0	0.4196	1	9521	9521		29.15	10.825	1	211350			56660	10285	37882	37897	64091	64091					0.054818195886127796
TAPPRPIT	8	Unmodified	_TAPPRPIT_					0	0	0		ENST00000343938.8_1_1:1263308-1263773:+|nuORF	ENST00000343938.8_1_1:1263308-1263773:+|nuORF	ENST00000343938.8_1_1:1263308-1263773:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	426.750527	851.486502	0.57826	0.00024677	-9.9894	-0.004263	-9.4111	-0.0040162	426.7476150229478	83.559	0.34894	83.706	83.438	83.787	0.14694	0.044811	-0.0065837	NaN	27.882	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38646			56661	10285	37882	37897							0.054818195886127796
TAPPRPIT	8	Unmodified	_TAPPRPIT_					0	0	0		ENST00000343938.8_1_1:1263308-1263773:+|nuORF	ENST00000343938.8_1_1:1263308-1263773:+|nuORF	ENST00000343938.8_1_1:1263308-1263773:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	426.750527	851.486502	-1.7077	-0.00072877	-6.1893	-0.0026413	-7.8971	-0.0033701	426.7486710299097	83.784	0.78396	83.922	83.482	84.266	0.13811	0.26151	-0.0033403	NaN	27.882	20	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28791			56662	10285	37882	37897							0.054818195886127796
TAPPRPIT	8	Unmodified	_TAPPRPIT_					0	0	0		ENST00000343938.8_1_1:1263308-1263773:+|nuORF	ENST00000343938.8_1_1:1263308-1263773:+|nuORF	ENST00000343938.8_1_1:1263308-1263773:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	426.750527	851.486502	0.29732	0.00012688	-1.8759	-0.00080053	-1.5786	-0.00067365	426.7496630551862	83.062	1.4572	83.527	82.91	84.367	0.46507	-0.13342	0.00034122	NaN	27.882	51	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	198030			56663	10285	37882	37897							0.054818195886127796
TAPPRPPKKR	10	Unmodified	_TAPPRPPKKR_					0	0	0		ENSG00000174282|ENST00000380599|ZBTB4	ENSG00000174282|ENST00000380599|ZBTB4	ENSG00000174282|ENST00000380599|ZBTB4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3566284179688	2	574.356557	1146.69856	-1.0357	-0.00059487	-0.061954	-3.5583E-05	-1.0977	-0.00063045	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.86348	1	10671	10671		31.53	2.3803	1	715310			56664	6923	37883	37898	64092	64092					0.13107910999406158
TAPPRTAR	8	Unmodified	_TAPPRTAR_					0	0	0		ENST00000575711.1_1_17:5323530-5324864:+|nuORF	ENST00000575711.1_1_17:5323530-5324864:+|nuORF	ENST00000575711.1_1_17:5323530-5324864:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25140380859375	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.89494	1	9194	9194		37.159	0	1	2020200			56665	14054	37884	37899	64093	64093					0.048394536773685104
TAPPVPLL	8	Unmodified	_TAPPVPLL_					0	0	0		nc|ENSG00000127124|Q5T1R4-2|HIVEP3;ENSG00000127124|ENST00000372583|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.57464599609375	2	404.252372	806.49019	-0.18745	-7.5778E-05	-3.0386	-0.0012284	-3.2261	-0.0013041	404.250906837897	82.027	1.4609	82.092	81.492	82.953	0.065338					41	33	2	0	0	0	0.4196	1	8091	8091		13.775	0	1	74549			56666	3484	37885	37900	64094	64094					0.0792048936248193
TAPPVPLL	8	Unmodified	_TAPPVPLL_					0	0	0		nc|ENSG00000127124|Q5T1R4-2|HIVEP3;ENSG00000127124|ENST00000372583|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.5751647949219	2	404.252372	806.49019	0.55852	0.00022578	-4.457	-0.0018018	-3.8985	-0.001576	404.2504047767585	83.371	0.67213	83.305	83.049	83.721	-0.066185					19	15	2	0	0	0	0.4196	1	8486	8486		21.702	6.0661	1	49354			56667	3484	37885	37900	64095	64095					0.0792048936248193
TAPRIVFKAM	10	Unmodified	_TAPRIVFKAM_					0	0	0			REV__ENST00000463236.5_1_X:23801468-23802475:+|nuORF	REV__ENST00000463236.5_1_X:23801468-23802475:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3305053710938	2	567.328619	1132.64269	-1.3957	-0.00079181	3.7842	0.0021469	2.3885	0.0013551	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.86471	1	8832	8832		30.318	2.2362	1	5956400	+		56668	18847	37886	37901	64096	64096					0.08166941767581193
TAPRVLSSLKH	11	Unmodified	_TAPRVLSSLKH_					0	0	0		nc|ENSG00000176871|Q9NYS7-2|WSB2;nc|ENSG00000176871|Q9NYS7-3|WSB2;ENSG00000176871|ENST00000315436|WSB2	nc|ENSG00000176871|Q9NYS7-2|WSB2	nc|ENSG00000176871|Q9NYS7-2|WSB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5744323730469	3	403.575178	1207.70371	-1.8238	-0.00073605	0.70537	0.00028467	-1.1185	-0.00045138	403.575388315242	82.768	3.2423	82.923	82.261	85.503	0.15474					165	75	3	0	0	0	0.71803	1	7929	7929		28.577	2.5133	1	1511600			56669	15115	37887	37902	64097	64097					0.10816170071370834
TAPSVFSP	8	Unmodified	_TAPSVFSP_					0	0	0		ENST00000467661.5_1_4:1985048-1988196:-|nuORF;ENSG00000185049|ENST00000382882|NELFA;ENST00000463820.5_1_4:1985048-1993691:-|nuORF	ENST00000467661.5_1_4:1985048-1988196:-|nuORF	ENST00000467661.5_1_4:1985048-1988196:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2090148925781	2	403.208161	804.401769	0.85516	0.00034481	1.2519	0.00050478	2.1071	0.00084958	403.2085877273137	85.891	2.1457	85.817	85.277	87.423	-0.073761					115	49	4	0	0	0	0.884	1	8894	8894		33.516	6.7195	1	1526100			56670	7674	37888	37903	64098	64098					-0.008255509479909051
TAPTRKLHDKV	11	Unmodified	_TAPTRKLHDKV_					0	0	0			REV__nc|ENSG00000164089|Q8TBG4-3|ETNPPL	REV__nc|ENSG00000164089|Q8TBG4-3|ETNPPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.58148193359375	3	422.582333	1264.72517	-0.18543	-7.8358E-05	-0.58125	-0.00024563	-0.76668	-0.00032399	422.58203704906714	97.831	3.5899	97.888	96.517	100.11	0.056831					202	83	4	0	0	0	0.75164	1	10315	10315		19.627	0	1	436660	+		56671	21030	37889	37904	64099	64099					0.10339555100040343
TAPTSPCH	8	Unmodified	_TAPTSPCH_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.1839599609375	2	407.18162	812.348688	2.4545	0.00099941	1.62	0.00065963	4.0744	0.001659	407.1826090336494	96.976	1.3902	97.381	97.011	98.402	0.40498					85	33	5	0	0	0	0.93529	2	11618	11618;11639		52.299	2.2746	1	3412500	+		56672	18287	37890	37905	64100;64101	64100					-0.06499252002322464
TAPTSPCH	8	Unmodified	_TAPTSPCH_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.1838684082031	2	407.18162	812.348688	2.5373	0.0010332	1.4352	0.00058439	3.9725	0.0016175	407.1824492627928	98.594	1.3554	98.956	98.525	99.88	0.36136					76	33	4	0	0	0	0.79972	3	11857	11857;11881;11891		62.978	10.679	1	2813800	+		56673	18287	37890	37905	64102;64103;64104	64102					-0.06499252002322464
TAPTSPCH	8	Unmodified	_TAPTSPCH_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.1840515136719	2	407.18162	812.348688	0.90789	0.00036968	3.3539	0.0013657	4.2618	0.0017353	407.183259835082	97.08	1.3079	97.471	97.073	98.381	0.39065					91	31	5	0	0	0	0.79972	4	11678	11678;11690;11728;11740		62.978	11.218	1	3974100	+		56674	18287	37890	37905	64105;64106;64107;64108	64105					-0.06499252002322464
TAPTSPCH	8	Unmodified	_TAPTSPCH_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.18377685546875	2	407.18162	812.348688	1.4808	0.00060295	2.1409	0.00087175	3.6217	0.0014747	407.18295907039726	98.627	1.0731	99.003	98.616	99.689	0.37679					79	26	5	0	0	0	0.60155	5	11917	11907;11917;11929;11942;11966		71.378	10.679	1	2838900	+		56675	18287	37890	37905	64109;64110;64111;64112;64113	64110					-0.06499252002322464
TAPTSPCH	8	Unmodified	_TAPTSPCH_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	407.18162	812.348688	2.4545	0.00099941	1.62	0.00065963	4.0744	0.001659	407.1826090336494	96.976	1.3902	97.381	97.011	98.402	0.40498	-0.045177	-0.00079886	NaN	62.978	85	33	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3412500	+		56676	18287	37890	37905							-0.06499252002322464
TAPTSPCH	8	Unmodified	_TAPTSPCH_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	407.18162	812.348688	1.4808	0.00060295	2.1409	0.00087175	3.6217	0.0014747	407.18295907039726	98.627	1.0731	99.003	98.616	99.689	0.37679	0.023865	0.00030082	NaN	71.378	79	26	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2838900	+		56677	18287	37890	37905							-0.06499252002322464
TAPTSPCH	8	Unmodified	_TAPTSPCH_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	407.18162	812.348688	0.90789	0.00036968	3.3539	0.0013657	4.2618	0.0017353	407.183259835082	97.08	1.3079	97.471	97.073	98.381	0.39065	0.045177	0.00061322	NaN	62.978	91	31	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3974100	+		56678	18287	37890	37905							-0.06499252002322464
TAPVPVSH	8	Unmodified	_TAPVPVSH_					0	0	0			REV__ENSG00000159958|ENST00000291232|TNFRSF13C	REV__ENSG00000159958|ENST00000291232|TNFRSF13C	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2326354980469	2	404.221603	806.428653	-0.18726	-7.5693E-05	-2.3752	-0.00096011	-2.5625	-0.0010358	404.2206621058248	85.159	0.61263	85.226	84.941	85.554	0.067261					16	13	2	0	0	0	0.4196	1	8490	8490		25.45	17.219	1	53869	+		56679	20687	37891	37906	64114	64114					0.01769557663192245
TAPVYEQAV	9	Unmodified	_TAPVYEQAV_					0	0	0		ENSG00000144712|ENST00000456430|CAND2;nc|ENSG00000144712|O75155-2|CAND2	ENSG00000144712|ENST00000456430|CAND2	ENSG00000144712|ENST00000456430|CAND2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.2373352050781	2	489.250557	976.486562	-1.3418	-0.0006565	3.1167	0.0015249	1.7749	0.00086836	489.25198164494026	57.481	0.34973	57.875	57.655	58.005	0.39407					10	8	2	0	0	0	0.20789	1	5977	5977		34.173	19.308	1	230330			56680	4727	37892	37907	64115	64115					-0.002622252020501037
TAQFVPLTR	9	Unmodified	_TAQFVPLTR_					0	0	0			REV__ENST00000429017.2_2_2:176996417-176996483:+|nuORF	REV__ENST00000429017.2_2_2:176996417-176996483:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7933349609375	2	516.795466	1031.57638	-0.27075	-0.00013992	-3.6615	-0.0018923	-3.9323	-0.0020322	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.76853	1	8815	8815		33.922	4.7516	1	817800	+		56681	26587	37893	37908	64116	64116					0.061854491971644165
TAQIEKKPRKP	11	Unmodified	_TAQIEKKPRKP_					0	0	0		ENSG00000203963|ENST00000684719|C1orf141	ENSG00000203963|ENST00000684719|C1orf141	ENSG00000203963|ENST00000684719|C1orf141	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.59765625	3	432.597983	1294.77212	-0.96196	-0.00041614	0.089593	3.8758E-05	-0.87237	-0.00037738	432.5979589237285	106.62	0.93322	106.62	106.18	107.11	0					73	20	5	0	0	0	0.75921	1	11090	11090		12.957	0	1	2667500			56682	8404	37894	37909	64117	64117					0.13652414651210165
TAQIEKKPRKP	11	Unmodified	_TAQIEKKPRKP_					0	0	0		ENSG00000203963|ENST00000684719|C1orf141	ENSG00000203963|ENST00000684719|C1orf141	ENSG00000203963|ENST00000684719|C1orf141	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.5976867675781	3	432.597983	1294.77212	-0.96173	-0.00041604	1.3295	0.00057514	0.36778	0.0001591	432.5984432488919	107.49	0.99143	107.49	106.84	107.83	0					54	23	3	0	0	0	0.76322	1	11102	11102		12.433	0	1	9853300			56683	8404	37894	37909	64118	64118					0.13652414651210165
TAQNLKRN	8	Unmodified	_TAQNLKRN_					0	0	0		ENSG00000116903|ENST00000366645|EXOC8	ENSG00000116903|ENST00000366645|EXOC8	ENSG00000116903|ENST00000366645|EXOC8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.76739501953125	2	472.76724	943.519927	-1.1355	-0.00053681	1.1341	0.00053614	-0.0014011	-6.6241E-07	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.89494	1	7957	7957		37.159	0	1	292450			56684	2954	37895	37910	64119	64119					0.04590821360523023
TARALLHAS	9	Unmodified	_TARALLHAS_					0	0	0			REV__ENST00000397555.3_1_19:13988417-13991381:+|nuORF	REV__ENST00000397555.3_1_19:13988417-13991381:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.271728515625	2	470.272158	938.529764	1.675	0.00078769	-1.7547	-0.00082518	-0.079724	-3.7492E-05	470.2713101405092	92.346	2.9868	92.282	91.318	94.305	-0.06414					149	70	4	0	0	0	0.78983	1	9732	9732		27.882	1.0861	1	1961400	+		56685	26170	37896	37911	64120	64120					0.058040093658974
TARKVKGYTGK	11	Unmodified	_TARKVKGYTGK_					0	0	0			REV__ENSG00000074590|ENST00000261402|NUAK1;REV__nc|ENSG00000074590|O60285-2|NUAK1	REV__ENSG00000074590|ENST00000261402|NUAK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8593139648438	2	604.859129	1207.70371	0.012057	7.2928E-06	-0.97821	-0.00059168	-0.96615	-0.00058438	604.8584425211963	80.105	0.71658	80.632	80.233	80.949	0.52676					43	16	3	0	0	0	0.71921	1	9206	9206		31.634	3.752	1	1113700	+		56686	16692;29710	37897	37912	64121	64121					0.10816170071370834
TARNRRLPGLR	11	Unmodified	_TARNRRLPGLR_					0	0	0		ENST00000586717.5_2_17:73934307-73937117:-|nuORF;ENST00000588478.1_1_17:73936919-73937117:-|nuORF	ENST00000586717.5_2_17:73934307-73937117:-|nuORF	ENST00000586717.5_2_17:73934307-73937117:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2677307128906	3	437.268971	1308.78508	-1.7231	-0.00075344	-0.84838	-0.00037097	-2.5714	-0.0011244	437.26850375985913	50.916	1.5264	50.916	50.06	51.586	0					171	39	5	0	0	0	0.74405	1	4063	4063		23.378	4.8469	1	3001200			56687	14174	37898	37913	64122	64122					0.14304290553968713
TARNRRLPGLR	11	Unmodified	_TARNRRLPGLR_					0	0	0		ENST00000586717.5_2_17:73934307-73937117:-|nuORF;ENST00000588478.1_1_17:73936919-73937117:-|nuORF	ENST00000586717.5_2_17:73934307-73937117:-|nuORF	ENST00000586717.5_2_17:73934307-73937117:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2677307128906	3	437.268971	1308.78508	-0.7643	-0.0003342	-1.7991	-0.0007867	-2.5634	-0.0011209	437.2680989446087	50.458	1.6052	50.435	49.633	51.238	-0.02343					188	43	5	0	0	0	0.73277	1	4339	4339		25.892	1.6599	1	2919200			56688	14174	37898	37913	64123	64123					0.14304290553968713
TARNRRLPGLR	11	Unmodified	_TARNRRLPGLR_					0	0	0		ENST00000586717.5_2_17:73934307-73937117:-|nuORF;ENST00000588478.1_1_17:73936919-73937117:-|nuORF	ENST00000586717.5_2_17:73934307-73937117:-|nuORF	ENST00000586717.5_2_17:73934307-73937117:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2677917480469	3	437.268971	1308.78508	-1.575	-0.00068869	-0.91628	-0.00040066	-2.4913	-0.0010893	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.74771	1	3956	3956		22.562	1.5294	1	3429700			56689	14174	37898	37913	64124	64124					0.14304290553968713
TARNRRLPGLR	11	Unmodified	_TARNRRLPGLR_					0	0	0		ENST00000586717.5_2_17:73934307-73937117:-|nuORF;ENST00000588478.1_1_17:73936919-73937117:-|nuORF	ENST00000586717.5_2_17:73934307-73937117:-|nuORF	ENST00000586717.5_2_17:73934307-73937117:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26776123046875	3	437.268971	1308.78508	0.28665	0.00012534	-2.7691	-0.0012109	-2.4825	-0.0010855	437.2676689275105	50.631	1.3868	50.681	50.015	51.402	0.049896					192	41	5	0	0	0	0.77205	1	3998	3998		17.167	0.63689	1	2963500			56690	14174	37898	37913	64125	64125					0.14304290553968713
TARRLRGFV	9	Unmodified	_TARRLRGFV_					0	0	0		nc|ENSG00000184428|Q969P6-2|TOP1MT;ENSG00000184428|ENST00000329245|TOP1MT	nc|ENSG00000184428|Q969P6-2|TOP1MT	nc|ENSG00000184428|Q969P6-2|TOP1MT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.3270874023438	2	538.327799	1074.64105	1.3454	0.00072427	-3.0293	-0.0016307	-1.6839	-0.00090648	538.3260218082069	100.6	2.6544	100.9	100.26	102.91	0.2999					222	70	6	0	0	0	0.76764	2	12221	12221;12245		34.173	2.3082	1	18713000			56691	7609	37899	37914	64126;64127	64126					0.10671068793840277
TARRLRGFV	9	Unmodified	_TARRLRGFV_					0	0	0		nc|ENSG00000184428|Q969P6-2|TOP1MT;ENSG00000184428|ENST00000329245|TOP1MT	nc|ENSG00000184428|Q969P6-2|TOP1MT	nc|ENSG00000184428|Q969P6-2|TOP1MT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.326416015625	2	538.327799	1074.64105	1.8602	0.0010014	-3.4699	-0.001868	-1.6098	-0.00086659	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.76764	2	12300	12300;12402		34.173	2.2177	1	19391000			56692	7609	37899	37914	64128;64129	64128					0.10671068793840277
TARRPTVV	8	Unmodified	_TARRPTVV_					0	0	0		ENST00000591365.1_1_17:43298722-43299568:-|nuORF	ENST00000591365.1_1_17:43298722-43299568:-|nuORF	ENST00000591365.1_1_17:43298722-43299568:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2744445800781	2	450.274701	898.534849	-1.2506	-0.00056311	0.52833	0.00023789	-0.72226	-0.00032522	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.87064	1	9605	9605		29.15	0	1	44812000			56693	14271	37900	37915	64130	64130					0.08152313228526964
TARRRKSFIQ	10	Unmodified	_TARRRKSFIQ_					0	0	0			REV__ENST00000510841.1_1_4:151935827-151936681:-|nuORF	REV__ENST00000510841.1_1_4:151935827-151936681:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.5853576660156	3	421.586189	1261.73674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.59	1	27.631	27.131	28.131	0.040834								0	0	0	0.45132	1	1253	1253		28.081	2.0181	1		+		56694	27964	37901	37916	64131	64131					0.11633796914088634
TARSLLRG	8	Unmodified	_TARSLLRG_					0	0	0			REV__ENSG00000127530|ENST00000641666|OR7C1	REV__ENSG00000127530|ENST00000641666|OR7C1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2655944824219	2	437.266876	872.519199	1.7902	0.0007828	-4.1426	-0.0018114	-2.3524	-0.0010286	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.90837	1	733	733		56.721	3.7844	1	738160	+		56695	18739	37902	37917	64132	64132					0.07784026711487968
TARWFWDRRRR	11	Unmodified	_TARWFWDRRRR_					0	0	0			REV__ENST00000361972.8_1_10:7212945-7217999:-|nuORF	REV__ENST00000361972.8_1_10:7212945-7217999:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.2911376953125	3	535.958908	1604.85489	-1.7175	-0.0009205	-0.58918	-0.00031578	-2.3067	-0.0012363	535.9585819880436	42.231	1.0038	42.645	42.313	43.316	0.4139					69	24	4	0	0	0	0.80164	1	3742	3742		10.998	2.5909	1	2136800	+		56696	25517	37903	37918	64133	64133					0.07666169222557073
TARWSLTLL	9	Unmodified	_TARWSLTLL_					0	0	0		nc|ENSG00000215162|Q8N2A0|LINC00269	nc|ENSG00000215162|Q8N2A0|LINC00269	nc|ENSG00000215162|Q8N2A0|LINC00269	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8106079101562	2	530.811116	1059.60768	1.919	0.0010186	-0.2647	-0.00014051	1.6543	0.00087811	530.8092001322652	97.33	1.4397	97.715	96.74	98.18	0.38548					101	34	4	0	0	0	0.67345	1	11714	11714		42.396	6.7778	1	571600			56697	15253	37904	37919	64134	64134					0.08026022231297247
TASAVVQHM	9	Unmodified	_TASAVVQHM_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2370300292969	2	472.236927	942.459301	0.3566	0.0001684	-0.31852	-0.00015042	0.038081	1.7983E-05	472.2365651722509	33.791	0.78185	34.096	33.871	34.653	0.30494					36	18	3	0	0	0	0.28163	1	2477	2477		66.429	27.408	1	646800			56698	2851	37905	37920	64135	64135					-0.01423032014065484
TASGKGKR	8	Unmodified	_TASGKGKR_					0	0	0		nc|ENSG00000151418|Q96LB4-4|ATP6V1G3	nc|ENSG00000151418|Q96LB4-4|ATP6V1G3	nc|ENSG00000151418|Q96LB4-4|ATP6V1G3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.7389221191406	2	402.737951	803.46135	0.18877	7.6025E-05	2.4349	0.00098064	2.6237	0.0010567	402.7388433637212	40.145	0.69707	40.226	40.046	40.743	0.081345					48	22	3	0	0	0	0.87479	1	2528	2528		30.504	7.4669	1	605970			56699	14991	37906	37921	64136	64136					0.051757647860426914
TASGKGKR	8	Unmodified	_TASGKGKR_					0	0	0		nc|ENSG00000151418|Q96LB4-4|ATP6V1G3	nc|ENSG00000151418|Q96LB4-4|ATP6V1G3	nc|ENSG00000151418|Q96LB4-4|ATP6V1G3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.73944091796875	2	402.737951	803.46135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.368	1	35.474	34.974	35.974	0.10603								0	0	0	0.3037	1	1863	1863		18.324	0.95945	1				56700	14991	37906	37921	64137	64137					0.051757647860426914
TASGKGKR	8	Unmodified	_TASGKGKR_					0	0	0		nc|ENSG00000151418|Q96LB4-4|ATP6V1G3	nc|ENSG00000151418|Q96LB4-4|ATP6V1G3	nc|ENSG00000151418|Q96LB4-4|ATP6V1G3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.7386169433594	2	402.737951	803.46135	-0.2372	-9.5529E-05	2.937	0.0011828	2.6998	0.0010873	402.73900291247327	40.415	0.69585	40.368	40.046	40.742	-0.04789					69	26	4	0	0	0	0.82658	2	2541	2541;2550		23.042	1.3402	1	593370			56701	14991	37906	37921	64138;64139	64138					0.051757647860426914
TASHISVGPA	10	Unmodified	_TASHISVGPA_					0	0	0			REV__ENSG00000110921|ENST00000228510|MVK	REV__ENSG00000110921|ENST00000228510|MVK	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7672119140625	2	470.248349	938.482145	-1.9291	-0.00090715	2.2195	0.0010437	0.29041	0.00013656	470.24916090395396	30.803	0.38418	30.803	30.597	30.981	0					19	12	2	0	0	0	0.37624	1	1427	1427		40.778	22.516	1	55326	+		56702	17840	37907	37922	64140	64140					0.010443103750503724
TASHISVGPA	10	Unmodified	_TASHISVGPA_					0	0	0			REV__ENSG00000110921|ENST00000228510|MVK	REV__ENSG00000110921|ENST00000228510|MVK	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	470.248349	938.482145	-1.1264	-0.00052969	-1.3102	-0.00061612	-2.4366	-0.0011458	470.24975402204575	30.754	0.79642	30.834	30.457	31.254	0.079834	0.015291	-0.00032184	NaN	40.778	19	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75874	+		56703	17840	37907	37922							0.010443103750503724
TASLIRWKLI	10	Unmodified	_TASLIRWKLI_					0	0	0			REV__nc|ENSG00000175221|Q9Y2X0-2|MED16	REV__nc|ENSG00000175221|Q9Y2X0-2|MED16	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.91473388671875	3	400.920286	1199.73903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.8	1	117.89	117.39	118.39	0.087753								0	0	0	0.45132	1	12455	12455		21.686	0	1		+		56704	22051	37908	37923	64141	64141					0.14714832599179317
TASSVGDNA	9	Unmodified	_TASSVGDNA_					0	0	0		ENST00000602024.5_1_19:53625730-53636129:-|nuORF	ENST00000602024.5_1_19:53625730-53636129:-|nuORF	ENST00000602024.5_1_19:53625730-53636129:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.1856384277344	2	411.185414	820.356276	3.4126	0.0014032	-2.2204	-0.000913	1.1922	0.00049021	411.18475488021454	103.97	1.5243	104.24	103.89	105.41	0.26524					73	36	3	0	0	0	0.77696	1	12705	12705		31.53	3.6476	1	843650			56705	14394	37909	37924	64142	64142					-0.06108821201030423
TASTPKVSP	9	Unmodified	_TASTPKVSP_					0	0	0			REV__nc|ENSG00000075292|Q14966-3|ZNF638	REV__nc|ENSG00000075292|Q14966-3|ZNF638	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	444.24554443359375	2	444.245275	886.475997	1.4251	0.00063311	-0.56167	-0.00024952	0.86348	0.0003836	444.24485409277173	107.1	1.0795	107.21	106.82	107.9	0.10396					105	39	3	0	0	0	0.69624	1	13071	13071		40.778	1.5253	1	6005700	+		56706	16707	37910	37925	64143	64143					0.02821792143527091
TASVSLPE	8	Unmodified	_TASVSLPE_					0	0	0		ENST00000368324.4_1_1:155854169-155854304:+|nuORF	ENST00000368324.4_1_1:155854169-155854304:+|nuORF	ENST00000368324.4_1_1:155854169-155854304:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.21270751953125	2	402.210901	802.407249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.769	1	74.814	74.314	75.314	0.04509								0	0	0	0.29631	1	7248	7248		25.45	0.94616	1				56707	10589	37911	37926	64144	64144					-0.0018587215618026676
TATACYGH	8	Unmodified	_TATACYGH_					0	0	0			REV__ENST00000602506.5_1_16:67760333-67793575:-|nuORF	REV__ENST00000602506.5_1_16:67760333-67793575:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.176025390625	2	412.173795	822.333038	0.68034	0.00028042	3.535	0.001457	4.2153	0.0017374	412.17540320072595	94.733	2.5486	94.896	94.33	96.878	0.16307					175	60	5	0	0	0	0.88915	1	9662	9662		35.201	3.2459	1	14144000	+		56708	19661	37912	37927	64145	64145					-0.08523538519352769
TATATNHVL	9	Unmodified	_TATATNHVL_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2482604980469	2	464.248349	926.482145	-1.4441	-0.00067042	1.7772	0.00082507	0.33312	0.00015465	464.2489688299292	30.441	1.0617	30.469	30.141	31.202	0.028618					43	23	3	0	0	0	0.066118	2	1993	1993;2006		101.25	26.998	1	532910			56709	663	37913	37928	64146;64147	64146					0.015963103750550545
TATATNHVL	9	Unmodified	_TATATNHVL_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2478332519531	2	464.248349	926.482145	-0.12437	-5.7741E-05	0.44072	0.0002046	0.31635	0.00014686	464.2484090963724	30.548	0.74213	30.551	30.316	31.058	0.0037212					33	16	3	0	0	0	0.17181	2	2012	2012;2024		79.713	30.271	1	516050			56710	663	37913	37928	64148;64149	64148					0.015963103750550545
TATGILLHPWL	11	Unmodified	_TATGILLHPWL_					0	0	0		ENSG00000101255|ENST00000217233|TRIB3	ENSG00000101255|ENST00000217233|TRIB3	ENSG00000101255|ENST00000217233|TRIB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3560180664062	2	611.353148	1220.69174	1.142	0.00069816	4.3354	0.0026505	5.4774	0.0033486	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.6921	1	9862	9862		32.812	8.2932	1	17478000			56711	1922	37914	37929	64150	64150					0.09022553328168215
TATGILLHPWL	11	Unmodified	_TATGILLHPWL_					0	0	0		ENSG00000101255|ENST00000217233|TRIB3	ENSG00000101255|ENST00000217233|TRIB3	ENSG00000101255|ENST00000217233|TRIB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.354248046875	2	611.353148	1220.69174	0.85003	0.00051967	3.7876	0.0023156	4.6376	0.0028352	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.63176	1	9601	9601		40.778	7.9657	1	6836400			56712	1922	37914	37929	64151	64151					0.09022553328168215
TATGQKLRN	9	Unmodified	_TATGQKLRN_					0	0	0		ENSG00000159648|ENST00000441824|TEPP;nc|ENSG00000159648|Q6URK8-2|SPMIP8	ENSG00000159648|ENST00000441824|TEPP	ENSG00000159648|ENST00000441824|TEPP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7803039550781	2	494.780348	987.546142	-0.074951	-3.7084E-05	0.21159	0.00010469	0.13664	6.7607E-05	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.76255	1	8785	8785		35.618	0	1	651380			56713	5541	37915	37930	64152	64152					0.051870905319901794
TATKKIDV	8	Unmodified	_TATKKIDV_					0	0	0		nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;ENSG00000119487|ENST00000265960|MAPKAP1;ENST00000448439.1_1_9:128327988-128420061:-|nuORF;nc|ENSG00000119487|Q9BPZ7-5|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-6|MAPKAP1	nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1	nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26068115234375	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.87479	1	2982	2982		30.504	0	1	22029000			56714	3072	37916	37931	64153	64153					0.07010669040221273
TATLKKLA	8	Unmodified	_TATLKKLA_					0	0	0			REV__nc|ENSG00000151812|A4IF30-2|SLC35F4	REV__nc|ENSG00000151812|A4IF30-2|SLC35F4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.2751159667969	2	423.276378	844.538203	0.73398	0.00031067	-3.697	-0.0015649	-2.9631	-0.0012542	423.2747584365875	111.41	0.50294	111.48	111.15	111.65	0.069542					25	17	2	0	0	0	0.79929	1	12002	12002		18.324	0	1	26949	+		56715	15600	37917	37932	64154	64154					0.10971563282510033
TATLKKLA	8	Unmodified	_TATLKKLA_					0	0	0			REV__nc|ENSG00000151812|A4IF30-2|SLC35F4	REV__nc|ENSG00000151812|A4IF30-2|SLC35F4	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	423.276378	844.538203	-0.96175	-0.00040708	-1.9845	-0.00083999	-2.9462	-0.0012471	423.27553364764276	111.36	0.26404	111.36	111.13	111.4	0	-0.036703	0.0013202	NaN	18.324	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6987.6	+		56716	15600	37917	37932							0.10971563282510033
TATLKKLA	8	Unmodified	_TATLKKLA_					0	0	0			REV__nc|ENSG00000151812|A4IF30-2|SLC35F4	REV__nc|ENSG00000151812|A4IF30-2|SLC35F4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	423.276378	844.538203	2.9275	0.0012391	-5.6449	-0.0023893	-2.7174	-0.0011502	423.27384145542374	111.38	0.69256	111.41	111.27	111.96	0.030388	0.014155	-0.0017785	NaN	18.324	36	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21337	+		56717	15600	37917	37932							0.10971563282510033
TATLKKLA	8	Unmodified	_TATLKKLA_					0	0	0			REV__nc|ENSG00000151812|A4IF30-2|SLC35F4	REV__nc|ENSG00000151812|A4IF30-2|SLC35F4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	423.276378	844.538203	-1.7191	-0.00072767	-1.1062	-0.00046824	-2.8254	-0.0011959	423.27581231120047	111.22	0.72989	111.33	110.9	111.63	0.11118	-0.060244	0.0020637	NaN	18.324	45	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52965	+		56718	15600	37917	37932							0.10971563282510033
TATLKKLA	8	Unmodified	_TATLKKLA_					0	0	0			REV__nc|ENSG00000151812|A4IF30-2|SLC35F4	REV__nc|ENSG00000151812|A4IF30-2|SLC35F4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	423.276378	844.538203	0.73398	0.00031067	-3.697	-0.0015649	-2.9631	-0.0012542	423.2747584365875	111.41	0.50294	111.48	111.15	111.65	0.069542	0.082792	-0.00012954	NaN	18.324	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26949	+		56719	15600	37917	37932							0.10971563282510033
TATRARRR	8	Unmodified	_TATRARRR_					0	0	0			REV__ENSG00000112234|ENST00000369244|FBXL4	REV__ENSG00000112234|ENST00000369244|FBXL4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3008117675781	2	494.299573	986.584593	-0.67103	-0.00033169	2.9792	0.0014726	2.3082	0.0011409	494.3010338749914	97.18	3.906	97.228	96.613	100.52	0.048157					375	90	6	0	0	0	0.89962	1	10597	10597		38.806	1.647	1	54981000	+		56720	17929	37918	37933	64155	64155					0.09076440957176146
TATRARRR	8	Unmodified	_TATRARRR_					0	0	0			REV__ENSG00000112234|ENST00000369244|FBXL4	REV__ENSG00000112234|ENST00000369244|FBXL4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.30108642578125	2	494.299573	986.584593	0.76681	0.00037903	1.5614	0.00077179	2.3282	0.0011508	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.87479	1	10285	10285		30.504	1.3541	1	52135000	+		56721	17929	37918	37933	64156	64156					0.09076440957176146
TATTGMSH	8	Oxidation (M)	_TATTGM(Oxidation (M))SH_		TATTGM(1)SH		TATTGM(48)SH	0	0	1		ENST00000470797.5_1_1:204494646-204501451:+|nuORF	ENST00000470797.5_1_1:204494646-204501451:+|nuORF	ENST00000470797.5_1_1:204494646-204501451:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.17816162109375	2	411.176535	820.338517	-0.78686	-0.00032354	3.7845	0.0015561	2.9976	0.0012325	411.1781818459566	86.863	1.1136	87.318	86.896	88.009	0.4543					64	26	5	0	0	0	0.92457	1	10224	10224		47.916	12.715	1	1724500			56722	12226	37919	37934	64157	64157		188			-0.07883859727542131
TATVRGLR	8	Unmodified	_TATVRGLR_					0	0	0		ENST00000507684.1_1_6:31976393-31978991:-|nuORF;ENST00000498094.1_1_6:32010712-32011087:-|nuORF;nc|ENSG00000168477|P22105-2|TNXB;nc|ENSG00000168477|P22105-1|TNXB;ENSG00000168477|ENST00000644971|TNXB;nc|ENSG00000168477|P22105-4|TNXB	ENST00000507684.1_1_6:31976393-31978991:-|nuORF	ENST00000507684.1_1_6:31976393-31978991:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2662658691406	2	437.266876	872.519199	0.051124	2.2355E-05	-3.1793	-0.0013902	-3.1282	-0.0013678	437.26563820123806	25.538	2.1653	25.281	24.501	26.666	-0.25721					170	48	6	0	0	0	0.85277	1	1427	1427		25.45	1.2474	1	21512000			56723	12962	37920	37935	64158	64158					0.07784026711476599
TAVAVLKK	8	Unmodified	_TAVAVLKK_					0	0	0		nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013-4|ARHGEF10;ENSG00000104728|ENST00000349830|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10;ENST00000523711.5_1_8:1824717-1874701:+|nuORF	nc|ENSG00000104728|O15013-7|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.25653076171875	2	415.278921	828.543289	2.2933	0.00095238	-1.7864	-0.00074187	0.5069	0.0002105	415.27801220409435	26.253	1.0668	25.913	25.659	26.725	-0.34035					47	23	3	0	0	0	0.4196	1	1419	1419		82.305	5.4584	1	742030			56724	2143	37921	37936	64159	64159					0.12215867145141601
TAVAVLKK	8	Unmodified	_TAVAVLKK_					0	0	0		nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013-4|ARHGEF10;ENSG00000104728|ENST00000349830|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10;ENST00000523711.5_1_8:1824717-1874701:+|nuORF	nc|ENSG00000104728|O15013-7|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	415.278921	828.543289	0.67901	0.00028198	-0.044345	-1.8415E-05	0.63467	0.00026356	415.2787415860159	26.3	0.98245	26.043	25.594	26.577	-0.2572	0.064871	0.0010044	NaN	82.305	48	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	722240			56725	2143	37921	37936							0.12215867145141601
TAVHFLRLIRQ	11	Unmodified	_TAVHFLRLIRQ_					0	0	0			REV__ENSG00000180785|ENST00000396952|OR51E1	REV__ENSG00000180785|ENST00000396952|OR51E1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.94476318359375	3	451.941973	1352.80409	0.347	0.00015682	2.6456	0.0011957	2.9926	0.0013525	451.94308439808714	55.355	1.4573	55.446	54.835	56.292	0.091167					122	48	4	0	0	0	0.69687	1	4593	4593		32.034	3.4574	1	477300	+		56726	22417	37922	37937	64160	64160					0.1417982712500816
TAVIDHHNY	9	Unmodified	_TAVIDHHNY_					0	0	0		nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST	nc|ENSG00000244038|P39656-2|DDOST	nc|ENSG00000244038|P39656-2|DDOST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.257080078125	2	535.256705	1068.49886	-0.71055	-0.00038032	0.67445	0.000361	-0.0361	-1.9323E-05	535.2569519060368	28.702	0.59791	28.672	28.443	29.04	-0.029207					22	13	2	0	0	0	0.21969	1	1755	1755		71.877	8.5712	1	209370			56727	8818	37923	37938	64161	64161					-0.032651887390102274
TAVIDHHNY	9	Unmodified	_TAVIDHHNY_					0	0	0		nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST	nc|ENSG00000244038|P39656-2|DDOST	nc|ENSG00000244038|P39656-2|DDOST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.257568359375	2	535.256705	1068.49886	0.45921	0.0002458	-0.63934	-0.00034221	-0.18012	-9.6413E-05	535.2561455274518	28.865	0.49956	28.692	28.434	28.933	-0.17336					18	11	2	0	0	0	0.71772	1	1787	1787		39.253	2.0937	1	165450			56728	8818	37923	37938	64162	64162					-0.032651887390102274
TAVKIWHK	8	Unmodified	_TAVKIWHK_					0	0	0		ENST00000256015.4_1_12:92537721-92537847:-|nuORF	ENST00000256015.4_1_12:92537721-92537847:-|nuORF	ENST00000256015.4_1_12:92537721-92537847:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7962951660156	2	491.795269	981.575986	-0.0088364	-4.3457E-06	1.0535	0.0005181	1.0447	0.00051376	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.79929	1	4787	4787		18.324	0.95945	1	782460			56729	9334	37924	37939	64163	64163					0.08446074267988024
TAVKIWHK	8	Unmodified	_TAVKIWHK_					0	0	0		ENST00000256015.4_1_12:92537721-92537847:-|nuORF	ENST00000256015.4_1_12:92537721-92537847:-|nuORF	ENST00000256015.4_1_12:92537721-92537847:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79522705078125	2	491.795269	981.575986	-0.12437	-6.1163E-05	0.93789	0.00046125	0.81352	0.00040009	491.7955803973609	45.417	1.3583	45.348	44.556	45.914	-0.06863					81	33	3	0	0	0	0.82658	1	3297	3297		21.96	1.013	1	439300			56730	9334	37924	37939	64164	64164					0.08446074267988024
TAVKIWHK	8	Unmodified	_TAVKIWHK_					0	0	0		ENST00000256015.4_1_12:92537721-92537847:-|nuORF	ENST00000256015.4_1_12:92537721-92537847:-|nuORF	ENST00000256015.4_1_12:92537721-92537847:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7971496582031	2	491.795269	981.575986	-0.17405	-8.5598E-05	1.0809	0.00053159	0.90686	0.00044599	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.8537	1	3563	3563		25.574	1.3713	1	2994900			56731	9334	37924	37939	64165	64165					0.08446074267988024
TAVKRARA	8	Unmodified	_TAVKRARA_					0	0	0			REV__ENST00000343938.8_1_1:1263415-1263484:+|nuORF	REV__ENST00000343938.8_1_1:1263415-1263484:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.77484130859375	2	436.774868	871.535184	-0.99178	-0.00043318	0.97263	0.00042482	-0.019148	-8.3634E-06	436.7752083239027	90.559	2.3196	91.029	90.562	92.882	0.47068					153	55	5	0	0	0	0.87922	1	10841	10841		31.955	0	1	11924000	+		56732	25297	37925	37940	64166	64166					0.09427732948370249
TAVPLLVP	8	Unmodified	_TAVPLLVP_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.2359924316406	2	405.260197	808.50584	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.857	1	63.857	63.357	64.357	0								0	0	0	0.29568	1	5607	5607		35.201	5.3592	1				56733	7373	37926	37941	64167	64167					0.09392775879518922
TAVREVRI	8	Unmodified	_TAVREVRI_					0	0	0		chr12:18143293-18175901|18|19.11|0.0|20.87|-|1|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|5	chr12:18143293-18175901|18|19.11|0.0|20.87|-|1|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|5	chr12:18143293-18175901|18|19.11|0.0|20.87|-|1|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28778076171875	2	472.287808	942.561064	-0.024015	-1.1342E-05	0.7135	0.00033698	0.68949	0.00032564	472.2881848861931	99.149	1.6194	99.196	98.809	100.43	0.047531					85	37	3	0	0	0	0.86677	1	10628	10628		27.882	3.6795	1	514560			56734	123	37927	37942	64168	64168					0.08748582400005489
TAVTDSPVL	9	Unmodified	_TAVTDSPVL_					0	0	0		nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;ENSG00000183091|ENST00000397345|NEB;ENST00000489048.1_1_2:152547165-152552100:-|nuORF	nc|ENSG00000183091|P20929-4|NEB	nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.746337890625	2	451.745108	901.475663	-0.092061	-4.1588E-05	1.7939	0.00081036	1.7018	0.00076878	451.7457658869967	34.705	0.79864	34.701	34.334	35.132	-0.0047417					49	20	3	0	0	0	0.62081	1	2094	2094		45.952	7.1458	1	211490			56735	7501	37928	37943	64169	64169					0.020983724236884882
TAVVIVEAML	10	Unmodified	_TAVVIVEAML_					0	0	0			REV__nc|ENSG00000161905|P16050-2|ALOX15	REV__nc|ENSG00000161905|P16050-2|ALOX15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3031005859375	2	523.301736	1044.58892	0.60955	0.00031898	2.9734	0.001556	3.583	0.001875	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.86763	1	10013	10013		26.693	0	1	4023800	+		56736	29972	37929	37944	64170	64170					0.06840724545213561
TAVVQVRATD	10	Unmodified	_TAVVQVRATD_					0	0	0		nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;ENST00000398792.3_1_10:73483820-73501738:+|nuORF	nc|ENSG00000107736|Q9H251-4|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2939453125	2	530.293288	1058.57202	2.0317	0.0010774	-1.9029	-0.0010091	0.12876	6.828E-05	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.8545	1	9553	9553		36.447	0	1	1811300			56737	2362	37930	37945	64171	64171					0.04507939983614051
TAWHAKGY	8	Unmodified	_TAWHAKGY_					0	0	0			REV__ENSG00000134262|ENST00000369569|AP4B1	REV__ENSG00000134262|ENST00000369569|AP4B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.73419189453125	2	467.232502	932.450451	-1.0177	-0.00047551	2.7557	0.0012876	1.738	0.00081207	467.2337824408168	68.11	1.4648	68.17	67.783	69.248	0.059288					157	61	4	0	0	0	0.80706	1	6186	6186		19.36	0	1	2841300	+		56738	19127	37931	37946	64172	64172					-0.018476375882414686
TAWHAKGY	8	Unmodified	_TAWHAKGY_					0	0	0			REV__ENSG00000134262|ENST00000369569|AP4B1	REV__ENSG00000134262|ENST00000369569|AP4B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.23321533203125	2	467.232502	932.450451	-0.26264	-0.00012271	1.4662	0.00068504	1.2035	0.00056232	467.23346633413524	64.606	2.155	65.159	64.517	66.672	0.55386					169	56	5	0	0	0	0.86791	1	7203	7203		28.254	2.8041	1	8508300	+		56739	19127	37931	37946	64173	64173					-0.018476375882414686
TAYDNFVEL	9	Unmodified	_TAYDNFVEL_					0	0	0		ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.253662109375	2	536.253297	1070.49204	-0.18867	-0.00010118	0.11457	6.1439E-05	-0.074102	-3.9738E-05	536.2534618025845	79.483	1.8229	79.899	79.232	81.055	0.41621					80	42	3	0	0	0	0.19818	1	9101	9101		74.255	0	1	764650			56740	6570	37932	37947	64174	64174					-0.04038546410242816
TAYILLPLSIP	11	Unmodified	_TAYILLPLSIP_					0	0	0			REV__ENST00000544702.5_1_12:7248989-7252531:-|nuORF	REV__ENST00000544702.5_1_12:7248989-7252531:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	401.2467346191406	3	400.912797	1199.71656	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.56	1	115.59	115.09	116.09	0.026466								0	0	0	0.56276	1	12680	12680		24.232	2.5461	1		+		56741	28516	37933	37948	64175	64175					0.12469188410887
TAYSVDVLSL	10	Unmodified	_TAYSVDVLSL_					0	0	0			REV__ENSG00000221910|ENST00000408955|OR2F2	REV__ENSG00000221910|ENST00000408955|OR2F2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.2787475585938	2	534.284597	1066.55464	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.11	1	110.11	109.61	110.61	0								0	0	0	0.45132	1	11431	11431		29.15	2.3535	1		+		56742	23612	37934	37949	64176	64176					0.024025996579666753
TCAACPFP	8	Unmodified	_TCAACPFP_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-7|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.171630859375	2	405.169667	808.324781	2.7756	0.0011246	2.5404	0.0010293	5.3161	0.0021539	405.1705677561798	27.457	1.1104	27.429	26.654	27.764	-0.027704					39	27	2	0	0	0	0.9159	1	1248	1248		44.531	2.0566	1	47405			56743	4314	37935	37950	64177	64177					-0.08704808760342075
TCAGPRWL	8	Unmodified	_TCAGPRWL_					0	0	0			REV__ENSG00000011028|ENST00000303375|MRC2	REV__ENSG00000011028|ENST00000303375|MRC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.22869873046875	2	452.228905	902.443257	1.1697	0.00052896	-3.091	-0.0013978	-1.9213	-0.00086888	452.22766943283847	107.06	0.98818	107.17	106.77	107.76	0.10396					98	37	5	0	0	0	0.86791	1	13048	13048		28.254	1.4582	1	2682300	+		56744	16174	37936	37951	64178	64178					-0.011866934603403934
TCAYTTGH	8	Unmodified	_TCAYTTGH_					0	0	0		nc|ENSG00000163795|Q8N8E2-3|ZNF513;nc|ENSG00000163795|Q8N8E2-2|ZNF513;ENSG00000163795|ENST00000323703|ZNF513	nc|ENSG00000163795|Q8N8E2-3|ZNF513	nc|ENSG00000163795|Q8N8E2-3|ZNF513	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.1802062988281	2	427.179078	852.343602	1.669	0.00071296	1.4701	0.00062798	3.1391	0.0013409	427.17981845763165	98.554	1.2388	98.915	98.399	99.638	0.36136					61	30	3	0	0	0	0.93529	1	11882	11882		52.299	13.493	1	1133500			56745	5865	37937	37952	64179	64179					-0.0884755586492929
TCAYTTGH	8	Unmodified	_TCAYTTGH_					0	0	0		nc|ENSG00000163795|Q8N8E2-3|ZNF513;nc|ENSG00000163795|Q8N8E2-2|ZNF513;ENSG00000163795|ENST00000323703|ZNF513	nc|ENSG00000163795|Q8N8E2-3|ZNF513	nc|ENSG00000163795|Q8N8E2-3|ZNF513	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.179931640625	2	427.179078	852.343602	1.7654	0.00075416	1.7706	0.00075637	3.536	0.0015105	427.1799893138367	98.58	1.3582	98.957	98.616	99.975	0.37679					58	33	3	0	0	0	0.91005	1	11932	11932		42.474	5.446	1	1156800			56746	5865	37937	37952	64180	64180					-0.0884755586492929
TCAYTTGH	8	Unmodified	_TCAYTTGH_					0	0	0		nc|ENSG00000163795|Q8N8E2-3|ZNF513;nc|ENSG00000163795|Q8N8E2-2|ZNF513;ENSG00000163795|ENST00000323703|ZNF513	nc|ENSG00000163795|Q8N8E2-3|ZNF513	nc|ENSG00000163795|Q8N8E2-3|ZNF513	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	427.179078	852.343602	-1.8543	-0.00079213	-1.8	-0.00076894	-3.6544	-0.0015611	427.17689158179775	98.57	1.3666	98.766	98.288	99.654	0.19585	-0.11363	-0.0024691	NaN	42.474	46	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90618			56747	5865	37937	37952							-0.0884755586492929
TCCPCCVCM	9	Unmodified	_TCCPCCVCM_					0	0	0			REV__nc|ENSG00000155890|Q8IWZ5-2|TRIM42	REV__nc|ENSG00000155890|Q8IWZ5-2|TRIM42	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.6435852050781	2	481.64019	961.265828	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.378	1	31.436	30.936	31.936	0.058315								0	0	0	0.32894	1	1425	1425		20.482	7.5226	1		+		56748	20452	37938	37953	64181	64181					-0.21635435704490646
TCHLIPGV	8	Unmodified	_TCHLIPGV_					0	0	0		ENSG00000175445|ENST00000650287|LPL;ENST00000523696.1_1_8:19796951-19805899:+|nuORF;ENST00000521994.1_1_8:19796804-19809252:+|nuORF	ENSG00000175445|ENST00000650287|LPL	ENSG00000175445|ENST00000650287|LPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2262268066406	2	420.225831	838.437109	2.3003	0.00096666	2.5371	0.0010662	4.8374	0.0020328	420.2267541958877	76.314	2.1809	76.362	74.634	76.815	0.047974					151	68	3	0	0	0	0.89457	1	7353	7353		37.028	0	1	250270			56749	7016	37939	37954	64182	64182					0.011427883081637447
TCIPHILV	8	Unmodified	_TCIPHILV_					0	0	0		ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.2588806152344	2	448.257131	894.499709	1.3621	0.00061059	3.2632	0.0014628	4.6253	0.0020733	448.2583183287722	90.104	3.5316	90.034	88.323	91.855	-0.069977					211	84	5	0	0	0	0.82464	1	9456	9456		21.702	1.2205	1	2982200			56750	7121	37940	37955	64183	64183					0.048239343763498255
TCIPKVELV	9	Unmodified	_TCIPKVELV_					0	0	0		nc|ENSG00000135503|P36896-5|ACVR1B;nc|ENSG00000135503|P36896-2|ACVR1B;nc|ENSG00000135503|P36896-3|ACVR1B;ENSG00000135503|ENST00000257963|ACVR1B;nc|ENSG00000135503|P36896-4|ACVR1B	nc|ENSG00000135503|P36896-5|ACVR1B	nc|ENSG00000135503|P36896-5|ACVR1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29052734375	2	501.288628	1000.5627	1.1291	0.00056599	2.4986	0.0012525	3.6277	0.0018185	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.78536	1	8860	8860		29.15	0	1	9883700			56751	4029	37941	37956	64184	64184					0.062444553737236674
TCIRIPKGFV	10	Unmodified	_TCIRIPKGFV_					0	0	0		ENST00000461783.7_3_6:155181875-155182040:+|nuORF	ENST00000461783.7_3_6:155181875-155182040:+|nuORF	ENST00000461783.7_3_6:155181875-155182040:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3303833007812	2	567.328619	1132.64269	-1.2006	-0.00068114	3.2187	0.0018261	2.0181	0.001145	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.86763	1	9453	9453		26.693	7.5894	1	15673000			56752	12032	37942	37957	64185	64185					0.08166941767558455
TCLKVLDIL	9	Unmodified	_TCLKVLDIL_					0	0	0			REV__ENST00000379095.4_1_15:90820398-90820464:+|nuORF	REV__ENST00000379095.4_1_15:90820398-90820464:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.30596923828125	2	509.304278	1016.594	-0.05438	-2.7696E-05	3.0051	0.0015305	2.9508	0.0015028	509.3056675667054	93.221	1.5935	93.291	92.756	94.349	0.06987					113	37	4	0	0	0	0.78536	1	9726	9726		29.15	6.1071	1	2872400	+		56753	25911	37943	37958	64186	64186					0.08637028407838443
TCLKVLDIL	9	Unmodified	_TCLKVLDIL_					0	0	0			REV__ENST00000379095.4_1_15:90820398-90820464:+|nuORF	REV__ENST00000379095.4_1_15:90820398-90820464:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.3059387207031	2	509.304278	1016.594	-0.37346	-0.00019021	3.4533	0.0017588	3.0798	0.0015685	509.30591642174505	92.904	1.3737	93.13	92.62	93.993	0.22547					101	32	4	0	0	0	0.78536	1	9397	9397		29.15	4.6304	1	2213400	+		56754	25911	37943	37958	64187	64187					0.08637028407838443
TCLKVLDIL	9	Unmodified	_TCLKVLDIL_					0	0	0			REV__ENST00000379095.4_1_15:90820398-90820464:+|nuORF	REV__ENST00000379095.4_1_15:90820398-90820464:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.3061218261719	2	509.304278	1016.594	1.3458	0.00068541	1.9184	0.00097703	3.2641	0.0016624	509.30514882075573	92.786	1.3462	93.233	92.733	94.079	0.44661					81	31	3	0	0	0	0.78536	1	11031	11031		29.15	1.2673	1	985270	+		56755	25911	37943	37958	64188	64188					0.08637028407838443
TCLKVLDIL	9	Unmodified	_TCLKVLDIL_					0	0	0			REV__ENST00000379095.4_1_15:90820398-90820464:+|nuORF	REV__ENST00000379095.4_1_15:90820398-90820464:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.3057861328125	2	509.304278	1016.594	0.22243	0.00011328	3.2465	0.0016535	3.469	0.0017668	509.3057747987958	92.885	1.4312	93.335	92.732	94.163	0.44988					93	33	4	0	0	0	0.7932	1	11088	11088		26.693	3.6504	1	968200	+		56756	25911	37943	37958	64189	64189					0.08637028407838443
TCLLSLGAH	9	Unmodified	_TCLLSLGAH_					0	0	0		ENST00000458726.5_1_7:137618524-137618635:-|nuORF	ENST00000458726.5_1_7:137618524-137618635:-|nuORF	ENST00000458726.5_1_7:137618524-137618635:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2637023925781	2	457.741845	913.469137	-1.4581	-0.00066745	2.0872	0.00095542	0.62911	0.00028797	457.7438208477242	79.717	0.39372	79.815	79.492	79.885	0.098701					16	12	2	0	0	0	0.20789	1	7534	7534		24.203	5.8783	1	29874			56757	11991	37944	37959	64190	64190					0.008941559913068886
TCLSLSLVL	9	Unmodified	_TCLSLSLVL_					0	0	0			REV__ENST00000392981.6_1_3:142133097-142135984:-|nuORF	REV__ENST00000392981.6_1_3:142133097-142135984:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.7741394042969	2	474.775354	947.536154	-0.68645	-0.00032591	-2.6089	-0.0012386	-3.2954	-0.0015646	474.7739625373348	94.858	1.1753	95.278	94.933	96.109	0.41963					51	28	3	0	0	0	0.22631	1	11386	11386		71.296	12.514	1	642350	+		56758	26040	37945	37960	64191	64191					0.06028766482404535
TCLSSFSH	8	Unmodified	_TCLSSFSH_					0	0	0		ENST00000467542.5_1_13:20411687-20425669:-|nuORF;nc|ENSG00000132950|Q9UJ78-1|ZMYM5;nc|ENSG00000132950|Q9UJ78-5|ZMYM5;ENST00000382909.5_1_13:20398619-20425669:-|nuORF;ENSG00000132950|ENST00000337963|ZMYM5;nc|ENSG00000121741|Q9UBW7-2|ZMYM2;ENST00000382881.7_1_13:20532931-20593821:+|nuORF;ENSG00000121741|ENST00000610343|ZMYM2	ENST00000467542.5_1_13:20411687-20425669:-|nuORF	ENST00000467542.5_1_13:20411687-20425669:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.1936950683594	2	441.194728	880.374903	1.0902	0.00048098	2.3748	0.0010478	3.465	0.0015287	441.1960280174818	97.831	1.1968	98.217	97.723	98.92	0.38548					53	28	3	0	0	0	0.88915	1	11779	11779		35.201	1.0282	1	469230			56759	3844	37946	37961	64192	64192					-0.07006982830830566
TCLTKAMITLI	11	Unmodified	_TCLTKAMITLI_					0	0	0		ENST00000434856.1_1_1:120144028-120151554:+|nuORF	ENST00000434856.1_1_1:120144028-120151554:+|nuORF	ENST00000434856.1_1_1:120144028-120151554:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3661499023438	2	604.343077	1206.6716	-0.48574	-0.00029355	4.05	0.0024476	3.5643	0.002154	604.8458347425652	104.38	0.60293	104.38	103.86	104.47	-0.0035706					15	13	2	0	0	0	0.17387	1	11259	11259		30.318	5.7985	1	112390			56760	11701	37947	37962	64193	64193					0.07653298281707066
TCNSAKLQPT	10	Unmodified	_TCNSAKLQPT_					0	0	0		ENSG00000107771|ENST00000372088|CCSER2;ENST00000224756.12_1_10:86230212-86274020:+|nuORF	ENSG00000107771|ENST00000372088|CCSER2;ENST00000224756.12_1_10:86230212-86274020:+|nuORF	ENSG00000107771|ENST00000372088|CCSER2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.2642822265625	2	531.766049	1061.51754	0.0093892	4.9928E-06	-2.1285	-0.0011319	-2.1191	-0.0011269	531.7642071473203	55.36	1.2449	55.352	54.942	56.187	-0.0077095					62	33	4	0	0	0	0.37624	1	4946	4946		67.494	9.6824	1	215770			56761	2367;9183	37948	37963	64194	64194					-0.010753951594551836
TCPIALKSIS	10	Unmodified	_TCPIALKSIS_					0	0	0		nc|ENSG00000129566|Q99973-2|TEP1;ENSG00000129566|ENST00000262715|TEP1	nc|ENSG00000129566|Q99973-2|TEP1	nc|ENSG00000129566|Q99973-2|TEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7935180664062	2	516.791535	1031.56852	0.82179	0.0004247	2.9641	0.0015318	3.7859	0.0019565	516.7930117143558	88.348	3.9499	88.398	87.079	91.029	0.050415					253	93	4	0	0	0	0.86218	1	9000	9000		32.812	9.2897	1	858640			56762	3595	37949	37964	64195	64195					0.05399553885399655
TCPQAALLH	9	Unmodified	_TCPQAALLH_					0	0	0		ENST00000559834.1_1_15:91474507-91475192:-|nuORF	ENST00000559834.1_1_15:91474507-91475192:-|nuORF	ENST00000559834.1_1_15:91474507-91475192:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.24609375	2	477.247295	952.480036	-0.88369	-0.00042174	-0.86186	-0.00041132	-1.7455	-0.00083306	477.24693641483543	64.828	2.6891	65.382	64.729	67.418	0.55386					152	75	5	0	0	0	0.67345	1	7260	7260		42.396	5.237	1	2295100			56763	13812	37950	37965	64196	64196					0.0018955836558234296
TCPRHKILRK	10	Unmodified	_TCPRHKILRK_					0	0	0			REV__ENST00000522204.1_1_8:134478135-134488174:-|nuORF	REV__ENST00000522204.1_1_8:134478135-134488174:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3792724609375	2	626.376966	1250.73938	-0.052521	-3.2898E-05	4.141	0.0025939	4.0885	0.002561	626.37954025277	107.79	0.47346	107.79	107.4	107.87	0					35	11	4	0	0	0	0.86348	1	11206	11206		31.53	1.2121	1	13895000	+		56764	16139	37951	37966	64197	64197					0.12403929047354723
TCPRHKILRK	10	Unmodified	_TCPRHKILRK_					0	0	0			REV__ENST00000522204.1_1_8:134478135-134488174:-|nuORF	REV__ENST00000522204.1_1_8:134478135-134488174:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3795166015625	2	626.376966	1250.73938	0.93884	0.00058807	3.3712	0.0021117	4.3101	0.0026997	626.3789780788948	105.75	2.6569	105.79	104.95	107.61	0.038322					312	62	6	0	0	0	0.86471	1	11665	11665		30.318	2.2362	1	47947000	+		56765	16139	37951	37966	64198	64198					0.12403929047354723
TCPRHKILRK	10	Unmodified	_TCPRHKILRK_					0	0	0			REV__ENST00000522204.1_1_8:134478135-134488174:-|nuORF	REV__ENST00000522204.1_1_8:134478135-134488174:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3797607421875	2	626.376966	1250.73938	4.8484	0.0030369	-0.52069	-0.00032615	4.3277	0.0027108	626.376538751344	105.56	2.7242	105.75	104.85	107.57	0.18647					224	90	4	0	0	0	0.86471	1	12895	12895		30.318	0	1	2877800	+		56766	16139	37951	37966	64199	64199					0.12403929047354723
TCPSGVCLD	9	Carbamidomethyl (C)	_TC(Carbamidomethyl (C))PSGVCLD_	TC(1)PSGVCLD		TC(39)PSGVC(-39)LD		0	1	0			REV__ENST00000419165.5_1_X:103220278-103220434:+|nuORF	REV__ENST00000419165.5_1_X:103220278-103220434:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.31854248046875	2	476.199153	950.383753	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.206	1	41.206	40.706	41.706	0								0	0	0	0.42198	1	2765	2765		57.811	13.434	2		+		56767	26471	37952	37967	64200	64200	324				-0.09342377256677992
TCQEQRLQGEV	11	Unmodified	_TCQEQRLQGEV_					0	0	0		ENSG00000161654|ENST00000293406|LSM12;nc|ENSG00000161654|Q3MHD2-2|LSM12	ENSG00000161654|ENST00000293406|LSM12	ENSG00000161654|ENST00000293406|LSM12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	645.8126831054688	2	645.808976	1289.6034	1.4899	0.00096219	3.7251	0.0024057	5.215	0.0033679	645.8112680017706	26.224	0.50321	26.192	25.952	26.455	-0.032125					28	11	3	0	0	0	0.71207	1	1115	1115		29.551	5.0316	1	75779			56768	5649	37953	37968	64201	64201					-0.029818550445952496
TCRVQHPL	8	Unmodified	_TCRVQHPL_					0	0	0		ENST00000533866.1_1_19:52146610-52148823:-|nuORF;ENSG00000254415|ENST00000360844|SIGLEC14	ENST00000533866.1_1_19:52146610-52148823:-|nuORF	ENST00000533866.1_1_19:52146610-52148823:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	477.2533264160156	2	477.252911	952.49127	0.25766	0.00012297	-3.205	-0.0015296	-2.9474	-0.0014066	477.25150035246503	30.131	0.72231	30.156	29.925	30.648	0.025013					30	18	3	0	0	0	0.88915	1	1552	1552		35.201	6.0512	1	42591			56769	8874	37954	37969	64202	64202					0.013123804597285016
TCRYGKKKLL	10	Unmodified	_TCRYGKKKLL_					0	0	0			REV__ENSG00000181826|ENST00000454158|RELL1	REV__ENSG00000181826|ENST00000454158|RELL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.91015625	3	403.909392	1208.70635	-0.34294	-0.00013851	2.3	0.00092901	1.9571	0.0007905	403.9102188126006	68.233	2.7499	68.781	67.193	69.943	0.54819					138	70	3	0	0	0	0.86621	1	7583	7583		26.063	0.9374	1	253300	+		56770	22482	37955	37970	64203	64203					0.11034302204689084
TCSRAIKIFLG	11	Unmodified	_TCSRAIKIFLG_					0	0	0		ENSG00000184956|ENST00000421673|MUC6	ENSG00000184956|ENST00000421673|MUC6	ENSG00000184956|ENST00000421673|MUC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.8466186523438	2	604.844633	1207.67471	0.86371	0.00052241	1.7732	0.0010725	2.6369	0.0015949	604.8455885108707	95.989	2.9552	96.152	95.152	98.107	0.16316					193	69	4	0	0	0	0.74763	1	9899	9899		22.58	0.61977	1	723950			56771	7658	37956	37971	64204	64204					0.079183094507016
TCSRAIKIFLG	11	Unmodified	_TCSRAIKIFLG_					0	0	0		ENSG00000184956|ENST00000421673|MUC6	ENSG00000184956|ENST00000421673|MUC6	ENSG00000184956|ENST00000421673|MUC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.8458862304688	2	604.844633	1207.67471	-1.2735	-0.00077028	3.7311	0.0022568	2.4576	0.0014865	604.84680283311	96.063	3.2734	96.265	95.11	98.383	0.20242					203	76	4	0	0	0	0.69995	1	9869	9869		31.53	1.2121	1	597870			56772	7658	37956	37971	64205	64205					0.079183094507016
TCVSRQKALK	10	Unmodified	_TCVSRQKALK_					0	0	0			REV__nc|ENSG00000198690|Q9Y2M0-2|FAN1	REV__nc|ENSG00000198690|Q9Y2M0-2|FAN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.329833984375	2	567.326608	1132.63866	1.5887	0.00090129	4.267	0.0024208	5.8556	0.0033221	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.86218	1	9569	9569		32.812	0	1	5459400	+		56773	23356	37957	37972	64206	64206					0.07764852273862743
TCVSRQKALK	10	Unmodified	_TCVSRQKALK_					0	0	0			REV__nc|ENSG00000198690|Q9Y2M0-2|FAN1	REV__nc|ENSG00000198690|Q9Y2M0-2|FAN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3296508789062	2	567.326608	1132.63866	1.497	0.00084932	4.0736	0.002311	5.5706	0.0031604	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.86763	1	9803	9803		26.693	2.4902	1	15259000	+		56774	23356	37957	37972	64207	64207					0.07764852273862743
TDAGCNLN	8	Unmodified	_TDAGCNLN_					0	0	0		ENST00000555259.5_1_14:31112578-31185169:+|nuORF;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1;ENSG00000092108|ENST00000458591|SCFD1	ENST00000555259.5_1_14:31112578-31185169:+|nuORF	ENST00000555259.5_1_14:31112578-31185169:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.170166015625	2	404.16871	806.322867	-0.18774	-7.5878E-05	3.363	0.0013592	3.1752	0.0012833	404.170229386983	78.542	2.4005	78.598	78.112	80.513	0.056114					177	77	5	0	0	0	0.85277	1	7685	7685		25.45	0	1	6189200			56775	1692	37958	37973	64208	64208					-0.08804146244585809
TDAPLCSH	8	Unmodified	_TDAPLCSH_					0	0	0			REV__nc|ENSG00000130787|O75146-2|HIP1R	REV__nc|ENSG00000130787|O75146-2|HIP1R	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.1888122558594	2	422.186903	842.359253	2.0292	0.0008567	2.3343	0.00098551	4.3635	0.0018422	422.18780289042525	101.44	0.86912	101.74	101.44	102.31	0.2999					44	25	2	0	0	0	0.91005	1	12318	12318		42.474	1.9018	1	3258100	+		56776	18910	37959	37974	64209	64209					-0.06823269347887617
TDAPLCSH	8	Unmodified	_TDAPLCSH_					0	0	0			REV__nc|ENSG00000130787|O75146-2|HIP1R	REV__nc|ENSG00000130787|O75146-2|HIP1R	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.1882019042969	2	422.186903	842.359253	2.9776	0.0012571	1.3524	0.00057099	4.3301	0.0018281	422.18753686026554	102.31	0.6795	102.61	102.26	102.94	0.29865					42	15	4	0	0	0	0.884	1	12468	12468		33.516	0	1	1901900	+		56777	18910	37959	37974	64210	64210					-0.06823269347887617
TDAPLCSH	8	Unmodified	_TDAPLCSH_					0	0	0			REV__nc|ENSG00000130787|O75146-2|HIP1R	REV__nc|ENSG00000130787|O75146-2|HIP1R	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	422.186903	842.359253	-1.7323	-0.00073136	6.1743	0.0026067	4.442	0.0018753	422.18944215313786	102.28	0.48248	102.47	102.33	102.81	0.19484	-0.11382	0.0023145	NaN	33.516	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	87716	+		56778	18910	37959	37974							-0.06823269347887617
TDAPLCSH	8	Unmodified	_TDAPLCSH_					0	0	0			REV__nc|ENSG00000130787|O75146-2|HIP1R	REV__nc|ENSG00000130787|O75146-2|HIP1R	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	422.186903	842.359253	0.73386	0.00030982	4.3012	0.0018159	5.035	0.0021257	422.18866422362345	102.52	0.48512	102.65	102.37	102.86	0.13523	0.06606	0.00073287	NaN	33.516	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97371	+		56779	18910	37959	37974							-0.06823269347887617
TDAPLCSH	8	Unmodified	_TDAPLCSH_					0	0	0			REV__nc|ENSG00000130787|O75146-2|HIP1R	REV__nc|ENSG00000130787|O75146-2|HIP1R	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	422.186903	842.359253	-1.8763	-0.00079214	6.9381	0.0029292	5.0618	0.002137	422.1898231402925	102.47	0.51285	102.61	102.26	102.77	0.1357	0.022653	0.0029594	NaN	33.516	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81987	+		56780	18910	37959	37974							-0.06823269347887617
TDATSAPHYG	10	Unmodified	_TDATSAPHYG_					0	0	0			REV__ENST00000510805.1_1_4:144480837-144481284:+|nuORF	REV__ENST00000510805.1_1_4:144480837-144481284:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.22259521484375	2	510.225071	1018.43559	-0.58544	-0.00029871	-3.543	-0.0018077	-4.1285	-0.0021064	510.22321540791023	88.543	1.4016	89.014	88.32	89.721	0.47068					100	34	5	0	0	0	0.84112	1	10490	10490		37.159	1.9584	1	3237400	+		56781	27963	37960	37975	64211	64211					-0.07289174246909624
TDETKSYIK	9	Unmodified	_TDETKSYIK_					0	0	0			REV__CON__Q28085	REV__CON__Q28085	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	542.7789916992188	2	542.779679	1083.5448	-0.20343	-0.00011042	0.21327	0.00011576	0.0098399	5.3409E-06	542.7796400144206	34.431	0.88705	34.427	34.044	34.931	-0.0047417					51	21	4	0	0	0	0.7932	1	2100	2100		24.519	0.31644	1	360540	+	+	56782	16001	37961	37976	64212	64212					0.006374116525421414
TDFPLQAYE	9	Unmodified	_TDFPLQAYE_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;nc|ENSG00000114841|Q9P2D7-6|DNAH1;ENST00000486752.5_1_3:52350520-52422757:+|nuORF;nc|ENSG00000114841|Q9P2D7-3|DNAH1;ENST00000497875.1_1_3:52356446-52387784:+|nuORF	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.2509155273438	2	542.253297	1082.49204	0.23761	0.00012885	-4.1306	-0.0022399	-3.893	-0.002111	542.2509291657893	21.197	0.71828	20.738	20.501	21.219	-0.4591					33	16	3	0	0	0	0.48102	1	752	752		52.937	10.462	1	179620			56783	2792	37962	37977	64213	64213					-0.04590546410258867
TDGAKVKRGG	10	Unmodified	_TDGAKVKRGG_					0	0	0			REV__ENSG00000101868|ENST00000379068|POLA1	REV__ENSG00000101868|ENST00000379068|POLA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7804870605469	2	494.780348	987.546142	-0.85772	-0.00042438	0.93735	0.00046378	0.07963	3.9399E-05	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.8608	1	8804	8804		34.173	2.2177	1	737700	+		56784	17307	37963	37978	64214	64214					0.05187090532012917
TDGGEMLFF	9	Unmodified	_TDGGEMLFF_					0	0	0			REV__nc|ENSG00000275835|Q96RT8-2|TUBGCP5	REV__nc|ENSG00000275835|Q96RT8-2|TUBGCP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.7251281738281	2	508.723318	1015.43208	-0.062057	-3.157E-05	4.0209	0.0020455	3.9589	0.002014	508.7251418634259	31.95	0.71365	31.899	31.567	32.281	-0.051031					35	15	3	0	0	0	0.39977	1	1833	1833		57.811	5.5121	1	216630	+		56785	24015	37964	37979	64215	64215					-0.07501560345122016
TDGKNPKP	8	Unmodified	_TDGKNPKP_					0	0	0		ENSG00000173517|ENST00000682557|PEAK1	ENSG00000173517|ENST00000682557|PEAK1	ENSG00000173517|ENST00000682557|PEAK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.7276611328125	2	428.729792	855.445031	0.19895	8.5294E-05	-1.523	-0.00065297	-1.3241	-0.00056767	428.72901598231977	79.781	1.1013	80.33	79.914	81.015	0.54945					47	25	3	0	0	0	0.89043	1	9180	9180		35.618	1.4457	1	812380			56786	6863	37965	37980	64216	64216					0.011526388292736556
TDGLRQAQIPG	11	Unmodified	_TDGLRQAQIPG_					0	0	0		ENSG00000112624|ENST00000314073|BICRAL	ENSG00000112624|ENST00000314073|BICRAL	ENSG00000112624|ENST00000314073|BICRAL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3103637695312	2	578.309469	1154.60439	-0.93812	-0.00054253	2.8159	0.0016285	1.8778	0.0010859	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.70737	1	12025	12025		30.318	2.2362	1	3649700			56787	2673	37966	37981	64217	64217					0.033267273866158575
TDGPLFSL	8	Unmodified	_TDGPLFSL_					0	0	0			REV__ENSG00000148843|ENST00000369797|PDCD11	REV__ENSG00000148843|ENST00000369797|PDCD11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.2217712402344	2	425.221268	848.427984	0.62259	0.00026474	0.52328	0.00022251	1.1459	0.00048725	425.2213667883707	88.31	1.2374	88.461	88.071	89.309	0.15055					70	29	3	0	0	0	0.87922	1	8759	8759		31.955	0.42505	1	909990	+		56788	20142	37967	37982	64218	64218					-0.002292817765237487
TDHLRGPLA	9	Unmodified	_TDHLRGPLA_					0	0	0			REV__nc|ENSG00000029534|P16157-14|ANK1	REV__nc|ENSG00000029534|P16157-14|ANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.26702880859375	2	490.269616	978.524678	-0.08195	-4.0178E-05	-2.5087	-0.00123	-2.5907	-0.0012701	490.2683992201926	84.078	3.5378	84.144	83.169	86.707	0.06678					153	81	2	0	0	0	0.72402	1	8550	8550		38.806	3.6054	1	271000	+		56789	29680	37968	37983	64219	64219					0.03455705503267836
TDHVGVILSK	10	Unmodified	_TDHVGVILSK_					0	0	0		ENST00000381161.5_1_X:2748138-2799251:+|nuORF	ENST00000381161.5_1_X:2748138-2799251:+|nuORF	ENST00000381161.5_1_X:2748138-2799251:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.28759765625	2	534.806031	1067.59751	-0.0055688	-2.9782E-06	-4.4068	-0.0023568	-4.4123	-0.0023597	535.3042877286168	85.697	0.78606	86.14	85.824	86.61	0.44331					32	18	4	0	0	0	0.37624	1	10055	10055		40.058	9.5545	1	100470			56790	10944	37969	37984	64220	64220					0.06641414506043475
TDIEQYQF	8	Unmodified	_TDIEQYQF_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	522.2392578125	2	522.237647	1042.46074	0.092336	4.8221E-05	3.0527	0.0015943	3.1451	0.0016425	522.239038988769	50.055	0.85317	50.052	49.756	50.609	-0.0030327					47	20	3	0	0	0	0.42407	1	4204	4204		79.451	0	1	644230			56791	4728	37970	37985	64221	64221					-0.05879119444330172
TDIEQYQF	8	Unmodified	_TDIEQYQF_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	522.239501953125	2	522.237647	1042.46074	-0.30358	-0.00015854	3.4151	0.0017835	3.1116	0.001625	522.2391793428664	50.077	0.75053	50.054	49.677	50.427	-0.02343					41	16	3	0	0	0	0.3289	2	4315	4291;4315		102.77	0	1	694930			56792	4728	37970	37985	64222;64223	64223					-0.05879119444330172
TDIEQYQF	8	Unmodified	_TDIEQYQF_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	522.23876953125	2	522.237647	1042.46074	0.35031	0.00018294	2.771	0.0014471	3.1213	0.0016301	522.2388848964648	50.097	0.79223	50.101	49.81	50.603	0.0035973					42	17	4	0	0	0	0.065811	2	4258	4236;4258		124.59	5.0374	1	592680			56793	4728	37970	37985	64224;64225	64225					-0.05879119444330172
TDIFLCWF	8	Unmodified	_TDIFLCWF_					0	0	0		ENSG00000068615|ENST00000538924|REEP1;nc|ENSG00000068615|Q9H902-2|REEP1;nc|ENSG00000068615|Q9H902|REEP1;nc|ENSG00000068615|Q9H902-3|REEP1	ENSG00000068615|ENST00000538924|REEP1	ENSG00000068615|ENST00000538924|REEP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.303466796875	2	522.746596	1043.47864	0.74852	0.00039129	1.8816	0.00098359	2.6301	0.0013749	522.7473413493468	86.908	0.94679	87.354	86.694	87.641	0.44628					33	22	2	0	0	0	0.4196	1	10154	10154		26.796	8.534	1	267070			56794	1201	37971	37986	64226	64226					-0.041360757231814205
TDINSLCRSHN	11	Unmodified	_TDINSLCRSHN_					0	0	0		ENST00000460939.5_1_11:62369949-62370383:-|nuORF;ENSG00000149499|ENST00000394773|EML3	ENST00000460939.5_1_11:62369949-62370383:-|nuORF	ENST00000460939.5_1_11:62369949-62370383:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.2969360351562	2	630.293493	1258.57243	1.2871	0.00081123	4.205	0.0026504	5.492	0.0034616	630.2960473873329	23.81	0.6923	23.863	23.602	24.294	0.05291					51	30	2	0	0	0	0.73277	1	797	797		22.58	0	1	159760			56795	5031	37972	37987	64227	64227					-0.04651008358837316
TDIQRVAVLCV	11	Unmodified	_TDIQRVAVLCV_					0	0	0		ENSG00000118246|ENST00000402774|FASTKD2;ENST00000471788.1_1_2:207651391-207655428:+|nuORF	ENSG00000118246|ENST00000402774|FASTKD2	ENSG00000118246|ENST00000402774|FASTKD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.8366088867188	2	608.839548	1215.66454	-0.43425	-0.00026439	-3.6339	-0.0022125	-4.0681	-0.0024768	608.8372155374379	110.58	1.0111	110.52	110.29	111.3	-0.055084					101	32	4	0	0	0	0.72918	1	12052	12052		26.693	0.62953	1	4475900			56796	3020	37973	37988	64228	64228					0.06533701725470564
TDKDLQGRGKV	11	Unmodified	_TDKDLQGRGKV_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.836669921875	2	608.835851	1215.65715	0.093851	5.714E-05	1.7948	0.0010927	1.8887	0.0011499	608.836828431824	110.46	1.0631	110.5	110.23	111.29	0.031738					103	33	4	0	0	0	0.70737	1	12095	12095		30.318	5.7985	1	3714300	+		56797	17362	37974	37989	64229	64229					0.05794685449427561
TDKEHKTGILL	11	Unmodified	_TDKEHKTGILL_					0	0	0			REV__ENSG00000054690|ENST00000329153|PLEKHH1	REV__ENSG00000054690|ENST00000329153|PLEKHH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.906982421875	3	418.906594	1253.69795	1.1829	0.00049552	-0.29993	-0.00012564	0.88296	0.00036988	418.9065299420683	19.793	0.56478	19.323	19.019	19.584	-0.46967					28	11	4	0	0	0	0.7434	1	580	580		26.75	3.3718	1	118110	+		56798	16405	37975	37990	64230	64230					0.0812502676906206
TDKKYLVLW	9	Unmodified	_TDKKYLVLW_					0	0	0			REV__ENST00000435790.6_1_10:49791013-49860397:-|nuORF	REV__ENST00000435790.6_1_10:49791013-49860397:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.8323364257812	2	583.334424	1164.6543	0.82048	0.00047861	-1.6868	-0.00098396	-0.8663	-0.00050534	583.333445937228	93.931	0.88247	94.093	93.283	94.165	0.16118					32	20	2	0	0	0	0.20789	1	9563	9563		29.15	0	1	301940	+		56799	26684	37976	37991	64231	64231					0.07855462062548213
TDKLGNKFAT	10	Unmodified	_TDKLGNKFAT_					0	0	0			REV__ENSG00000167858|ENST00000338694|TEKT1	REV__ENSG00000167858|ENST00000338694|TEKT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.7960815429688	2	547.795663	1093.57677	-0.51915	-0.00028439	0.57038	0.00031245	0.051234	2.8066E-05	547.7957749077788	35.605	0.86988	35.614	35.295	36.165	0.0092773					39	18	3	0	0	0	0.86106	1	2264	2264		33.922	1.1092	1	196450	+		56800	21432	37977	37992	64232	64232					0.03372824126381602
TDKPLPIL	8	Unmodified	_TDKPLPIL_					0	0	0			REV__ENST00000488527.5_1_7:962627-962927:-|nuORF	REV__ENST00000488527.5_1_7:962627-962927:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.7773742675781	2	448.776211	895.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.554	1	67.606	67.106	68.106	0.052368								0	0	0	0.29353	1	6024	6024		28.254	7.7724	1		+		56801	27595	37978	37993	64233	64233					0.08592143562668753
TDKPSQSSF	9	Unmodified	_TDKPSQSSF_					0	0	0			REV__ENSG00000196862|ENST00000408999|RGPD4;REV__nc|ENSG00000183054|Q99666-2|RGPD5;REV__ENSG00000153201|ENST00000283195|RANBP2	REV__ENSG00000196862|ENST00000408999|RGPD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.7348937988281	2	498.735271	995.45599	-0.24905	-0.00012421	3.5656	0.0017783	3.3165	0.0016541	498.73693777785616	21.312	0.65205	21.247	20.81	21.462	-0.064743					40	26	2	0	0	0	0.69624	1	600	600		40.778	0.20554	1	48811	+		56802	20335;16211;20336	37979	37994	64234	64234					-0.04192003587081672
TDKSFVEK	8	Unmodified	_TDKSFVEK_					0	0	0		ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;ENSG00000105357|ENST00000642316|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14	ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000105357|Q7Z406-4|MYH14	nc|ENSG00000133392|P35749-4|MYH11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2500305175781	2	477.250557	952.486562	1.1624	0.00055478	-1.3741	-0.00065579	-0.21167	-0.00010102	477.24981301864784	22.679	0.59389	22.26	22.016	22.61	-0.41879					33	13	3	0	0	0	0.58928	1	940	940		71.877	5.4482	1	220000			56803	14928;1829;2207	37980	37995	64235	64235					0.008417747979592605
TDKSFVEK	8	Unmodified	_TDKSFVEK_					0	0	0		ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;ENSG00000105357|ENST00000642316|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14	ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000105357|Q7Z406-4|MYH14	nc|ENSG00000133392|P35749-4|MYH11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.2496032714844	2	477.250557	952.486562	-0.48393	-0.00023096	0.20142	9.6128E-05	-0.28251	-0.00013483	477.2505637643697	22.757	0.62847	22.146	21.91	22.539	-0.6107					32	15	3	0	0	0	0.36517	2	953	953;963		82.241	25.519	1	259200			56804	14928;1829;2207	37980	37995	64236;64237	64236					0.008417747979592605
TDKTKGLL	8	Unmodified	_TDKTKGLL_					0	0	0			REV__ENST00000470594.5_1_X:51805328-51809606:-|nuORF	REV__ENST00000470594.5_1_X:51805328-51809606:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.263427734375	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.86677	2	2427	2427;2451		40.778	6.6056	1	3673500	+		56805	20393	37981	37996	64238;64239	64238					0.07010669040232642
TDKTKGLL	8	Unmodified	_TDKTKGLL_					0	0	0			REV__ENST00000470594.5_1_X:51805328-51809606:-|nuORF	REV__ENST00000470594.5_1_X:51805328-51809606:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26336669921875	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.91472	1	2490	2490		44.117	1.7207	1	2361100	+		56806	20393	37981	37996	64240	64240					0.07010669040232642
TDKTKGLL	8	Unmodified	_TDKTKGLL_					0	0	0			REV__ENST00000470594.5_1_X:51805328-51809606:-|nuORF	REV__ENST00000470594.5_1_X:51805328-51809606:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2633056640625	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.91472	1	1874	1874		44.117	1.7207	1	11160000	+		56807	20393	37981	37996	64241	64241					0.07010669040232642
TDKTKGLL	8	Unmodified	_TDKTKGLL_					0	0	0			REV__ENST00000470594.5_1_X:51805328-51809606:-|nuORF	REV__ENST00000470594.5_1_X:51805328-51809606:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2633361816406	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.89043	1	2704	2704		35.618	0	1	21381000	+		56808	20393	37981	37996	64242	64242					0.07010669040232642
TDLKKKRHLL	10	Unmodified	_TDLKKKRHLL_					0	0	0			REV__nc|ENSG00000112339|Q9Y450-2|HBS1L	REV__nc|ENSG00000112339|Q9Y450-2|HBS1L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3798828125	2	626.398422	1250.78229	-0.23275	-0.00014579	0.7453	0.00046685	0.51255	0.00032106	626.3988224893867	106.06	0.58558	106.04	105.94	106.52	-0.025146					15	13	2	0	0	0	0.37624	1	11559	11559		20.947	0	1	370500	+		56809	29783	37982	37997	64243	64243					0.16693022376489353
TDLKKKRHLL	10	Unmodified	_TDLKKKRHLL_					0	0	0			REV__nc|ENSG00000112339|Q9Y450-2|HBS1L	REV__nc|ENSG00000112339|Q9Y450-2|HBS1L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.9223327636719	3	417.934706	1250.78229	-1.8944	-0.00079173	3.0508	0.001275	1.1564	0.00048331	417.93632613806926	105.44	0.66962	105.51	105.09	105.76	0.073112					26	16	2	0	0	0	0.37624	1	11177	11177		10.587	2.1795	1	133940	+		56810	29783	37982	37997	64244	64244					0.16693022376489353
TDLPNAQLL	9	Unmodified	_TDLPNAQLL_					0	0	0			REV__nc|ENSG00000163946|Q9UK61-3|TASOR	REV__nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.27593994140625	2	492.771657	983.528761	-0.078994	-3.8926E-05	-0.48491	-0.00023895	-0.5639	-0.00027788	492.7715093797498	72.669	0.60105	72.706	72.5	73.101	0.037148					28	21	2	0	0	0	0.64555	1	6935	6935		44.377	5.1244	1	66732	+		56811	21001	37983	37998	64245	64245					0.03633750206347486
TDLQVNFFQ	9	Unmodified	_TDLQVNFFQ_					0	0	0			REV__ENST00000462501.1_1_2:96858901-96861247:-|nuORF	REV__ENST00000462501.1_1_2:96858901-96861247:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	556.2722778320312	2	556.274564	1110.53457	-0.28	-0.00015576	0.63203	0.00035158	0.35204	0.00019583	556.2745083738072	47.867	0.66684	47.841	47.644	48.311	-0.026737					35	18	3	0	0	0	0.36616	1	4036	4036		60.118	7.1816	1	346340	+		56812	16866	37984	37999	64246	64246					-0.016271512820139833
TDLSASPVI	9	Unmodified	_TDLSASPVI_					0	0	0			REV__nc|ENSG00000185046|Q7Z6G8-6|ANKS1B	REV__nc|ENSG00000185046|Q7Z6G8-6|ANKS1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7449951171875	2	451.745108	901.475663	0.00016611	7.5038E-08	0.28443	0.00012849	0.2846	0.00012857	451.7450667794695	33.328	0.79413	33.331	32.989	33.783	0.0030785					41	18	3	0	0	0	0.47272	1	1957	1957		53.351	0	1	260270	+		56813	22733	37985	38000	64247	64247					0.02098372423665751
TDLSASPVI	9	Unmodified	_TDLSASPVI_					0	0	0			REV__nc|ENSG00000185046|Q7Z6G8-6|ANKS1B	REV__nc|ENSG00000185046|Q7Z6G8-6|ANKS1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.74517822265625	2	451.745108	901.475663	-0.42544	-0.00019219	0.58191	0.00026287	0.15647	7.0685E-05	451.7452985454062	33.515	0.67748	33.459	33.146	33.823	-0.056385					47	15	4	0	0	0	0.22631	2	2050	2050;2063		71.296	6.5852	1	315680	+		56814	22733	37985	38000	64248;64249	64248					0.02098372423665751
TDLSASPVI	9	Unmodified	_TDLSASPVI_					0	0	0			REV__nc|ENSG00000185046|Q7Z6G8-6|ANKS1B	REV__nc|ENSG00000185046|Q7Z6G8-6|ANKS1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.74493408203125	2	451.745108	901.475663	-0.010196	-4.6062E-06	1.0103	0.0004564	1.0001	0.0004518	451.7456051590094	33.34	1.2132	33.338	32.979	34.193	-0.0016365					54	27	3	0	0	0	0.15928	1	1960	1960		82.305	2.854	1	302940	+		56815	22733	37985	38000	64250	64250					0.02098372423665751
TDLTLQLF	8	Unmodified	_TDLTLQLF_					0	0	0		ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	475.7630920410156	2	475.7633	949.512048	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.942	1	24.942	24.442	25.442	0								0	0	0	0.29568	1	878	878		35.201	0	1				56816	1301	37986	38001	64251	64251					0.035272493203933664
TDNKGDTS	8	Unmodified	_TDNKGDTS_					0	0	0		nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	nc|ENSG00000198420|Q9Y4C2-2|TCAF1	nc|ENSG00000198420|Q9Y4C2-2|TCAF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.1849365234375	2	419.182872	836.35119	0.72807	0.0003052	1.1249	0.00047153	1.8529	0.00077672	419.1832482670418	100.06	1.0157	100.21	99.721	100.74	0.15073					53	22	3	0	0	0	0.88601	1	10456	10456		34.173	7.3764	1	323170			56817	8271	37987	38002	64252	64252					-0.07353125063650623
TDPAEPRY	8	Unmodified	_TDPAEPRY_					0	0	0			REV__nc|ENSG00000162729|Q969P0-3|IGSF8	REV__nc|ENSG00000162729|Q969P0-3|IGSF8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	474.2319641113281	2	474.724707	947.43486	0.017009	8.0746E-06	0.24131	0.00011456	0.25832	0.00012263	474.7247433558989	39.761	0.65296	39.714	39.464	40.116	-0.04789					24	16	2	0	0	0	0.4196	1	2459	2459		45.952	11.779	1	145430	+		56818	20841	37988	38003	64253	64253					-0.04095968895956048
TDPPGAFPDDY	11	Unmodified	_TDPPGAFPDDY_					0	0	0			REV__ENST00000497511.5_1_7:26786288-26904048:-|nuORF	REV__ENST00000497511.5_1_7:26786288-26904048:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.751708984375	2	597.751118	1193.48768	-0.21334	-0.00012752	1.2517	0.00074818	1.0383	0.00062066	597.751296317781	71.665	0.42158	71.626	71.39	71.811	-0.039001					31	15	3	0	0	0	0.5603	1	6964	6964		47.657	1.7054	1	86111	+		56819	16072	37989	38004	64254	64254					-0.10132055623785163
TDPPGAFPDDY	11	Unmodified	_TDPPGAFPDDY_					0	0	0			REV__ENST00000497511.5_1_7:26786288-26904048:-|nuORF	REV__ENST00000497511.5_1_7:26786288-26904048:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	597.751118	1193.48768	-0.21334	-0.00012752	1.2517	0.00074818	1.0383	0.00062066	597.751296317781	71.665	0.42158	71.626	71.39	71.811	-0.039001	-0.014896	-0.00059393	NaN	47.657	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86111	+		56820	16072	37989	38004							-0.10132055623785163
TDPPLGPEK	9	Unmodified	_TDPPLGPEK_					0	0	0			REV__ENST00000468135.5_1_1:32542222-32557503:+|nuORF	REV__ENST00000468135.5_1_1:32542222-32557503:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.24835205078125	2	477.250557	952.486562	1.1624	0.00055478	-1.3741	-0.00065579	-0.21167	-0.00010102	477.24981301864784	22.679	0.59389	22.26	22.016	22.61	-0.41879					33	13	3	0	0	0	0.33718	1	930	930		62.107	1.1355	1	220000	+		56821	27177	37990	38005	64255	64255					0.008417747979592605
TDPRLLYI	8	Unmodified	_TDPRLLYI_					0	0	0		nc|ENSG00000151366|O95298-2|NDUFC2;ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-3|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14	nc|ENSG00000151366|O95298-2|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.7826232910156	2	495.784567	989.554582	0.042684	2.1162E-05	-0.46751	-0.00023178	-0.42483	-0.00021062	495.78420511538275	48.828	0.52225	49.732	49.489	50.012	0.90424					31	12	3	0	0	0	0.86288	1	4745	4745		26.796	0	1	1014400			56822	5111	37991	38006	64256	64256					0.059386444485994616
TDPTILLQ	8	Unmodified	_TDPTILLQ_					0	0	0			REV__nc|ENSG00000136436|Q13137-3|CALCOCO2	REV__nc|ENSG00000136436|Q13137-3|CALCOCO2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.7547302246094	2	450.755475	899.496398	-1.2719	-0.00057332	-1.654	-0.00074556	-2.9259	-0.0013189	450.7546758979468	81.682	3.9504	81.682	80.4	84.351	0					234	110	3	0	0	0	0.87479	1	7520	7520		30.504	6.3009	1	177450	+		56823	29872	37992	38007	64257	64257					0.04262962803340997
TDQDQKIKK	9	Unmodified	_TDQDQKIKK_					0	0	0		ENSG00000189132|ENST00000329357|FAM47B	ENSG00000189132|ENST00000329357|FAM47B	ENSG00000189132|ENST00000329357|FAM47B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3062133789062	2	552.306395	1102.59824	0.78014	0.00043088	-0.74693	-0.00041253	0.033219	1.8347E-05	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.51592	1	9472	9472		51.193	5.2204	1	1841700			56824	7991	37993	38008	64258	64258					0.05104209155092576
TDQFKSKEK	9	Unmodified	_TDQFKSKEK_					0	0	0			REV__nc|ENSG00000165409|P16473|TSHR	REV__nc|ENSG00000165409|P16473|TSHR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.7771606445312	2	555.793121	1109.57169	0.90582	0.00050345	-1.2022	-0.00066819	-0.29641	-0.00016474	555.792253317415	27.721	0.56341	27.697	27.347	27.911	-0.023558					29	13	3	0	0	0	0.77244	1	1253	1253		32.812	0	1	48485	+		56825	21181	37994	38009	64259	64259					0.021285202637500333
TDQKIDYDV	9	Unmodified	_TDQKIDYDV_					0	0	0		nc|ENSG00000137941|Q6ZT98-3|TTLL7;ENSG00000137941|ENST00000260505|TTLL7;ENST00000488014.5_1_1:84386258-84403687:-|nuORF;ENST00000472688.5_1_1:84383321-84408355:-|nuORF;nc|ENSG00000137941|Q6ZT98-2|TTLL7	nc|ENSG00000137941|Q6ZT98-3|TTLL7	nc|ENSG00000137941|Q6ZT98-3|TTLL7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.2277221679688	2	548.761486	1095.50842	-0.077987	-4.2796E-05	3.5814	0.0019653	3.5034	0.0019225	548.7635939056124	33.93	0.1263	34.14	34.065	34.192	0.21002					4	2	2	0	0	0	0.20789	1	2470	2470		10.866	0	1	29727			56826	4246	37995	38010	64260	64260					-0.035514652441406724
TDQVSSQG	8	Unmodified	_TDQVSSQG_					0	0	0			REV__ENST00000531787.5_2_11:60184399-60184972:+|nuORF	REV__ENST00000531787.5_2_11:60184399-60184972:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.1856384277344	2	411.185414	820.356276	2.6341	0.0010831	-0.68171	-0.00028031	1.9524	0.00080279	411.18505067762544	104.06	1.4942	104.25	103.81	105.3	0.18887					65	37	2	0	0	0	0.87064	1	12677	12677		29.15	3.5755	1	862490	+		56827	28310	37996	38011	64261	64261					-0.061088212010190546
TDRPNIEIT	9	Unmodified	_TDRPNIEIT_					0	0	0			REV__nc|ENSG00000116791|Q08257-2|CRYZ	REV__nc|ENSG00000116791|Q08257-2|CRYZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.7788696289062	2	529.77747	1057.54039	-0.036677	-1.9431E-05	3.7681	0.0019963	3.7314	0.0019768	529.7793029461789	64.6	1.1094	64.603	64.064	65.173	0.0021362					72	32	4	0	0	0	0.74721	1	6061	6061		37.159	5.2042	1	265940	+		56828	18226	37997	38012	64262	64262					0.01391947229649304
TDSIEIQLPL	10	Unmodified	_TDSIEIQLPL_					0	0	0			REV__nc|ENSG00000139364|Q14DG7-3|TMEM132B	REV__nc|ENSG00000139364|Q14DG7-3|TMEM132B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	564.810302734375	2	564.810979	1127.6074	0.86588	0.00048906	-1.6793	-0.0009485	-0.81345	-0.00045945	564.8098681385823	109.78	1.4847	109.86	109.64	111.12	0.078552					84	55	3	0	0	0	0.86763	1	11803	11803		26.693	0	1	1627800	+		56829	19537	37998	38013	64263	64263					0.04870557720778379
TDSNFALLV	9	Unmodified	_TDSNFALLV_					0	0	0		ENST00000473000.2_1_6:3267793-3267943:+|nuORF;ENSG00000180822|ENST00000438998|PSMG4;ENST00000380305.4_1_6:3259174-3267943:+|nuORF;nc|ENSG00000180822|Q5JS54-2|PSMG4	ENST00000473000.2_1_6:3267793-3267943:+|nuORF	ENST00000473000.2_1_6:3267793-3267943:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.2582702636719	2	490.258382	978.502212	3.5979	0.0017639	-4.4703	-0.0021916	-0.8724	-0.0004277	490.2561771879544	104.75	1.7929	104.97	104.29	106.09	0.22681					67	43	2	0	0	0	0.78058	1	12821	12821		30.504	1.3541	1	267130			56830	7352	37999	38014	64264	64264					0.012100613149982564
TDSNFALLV	9	Unmodified	_TDSNFALLV_					0	0	0		ENST00000473000.2_1_6:3267793-3267943:+|nuORF;ENSG00000180822|ENST00000438998|PSMG4;ENST00000380305.4_1_6:3259174-3267943:+|nuORF;nc|ENSG00000180822|Q5JS54-2|PSMG4	ENST00000473000.2_1_6:3267793-3267943:+|nuORF	ENST00000473000.2_1_6:3267793-3267943:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	490.258382	978.502212	-0.76933	-0.00037717	-0.49588	-0.00024311	-1.2652	-0.00062028	490.2580849889513	105.11	1.3511	105.11	104.7	106.06	0	0.067933	0.00081324	NaN	30.504	53	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	223790			56831	7352	37999	38014							0.012100613149982564
TDSTIRTENE	10	Unmodified	_TDSTIRTENE_					0	0	0		ENSG00000147789|ENST00000532777|ZNF7;nc|ENSG00000147789|P17097-2|ZNF7	ENSG00000147789|ENST00000532777|ZNF7	ENSG00000147789|ENST00000532777|ZNF7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3323974609375	2	583.270207	1164.52586	-0.44068	-0.00025704	2.594	0.001513	2.1533	0.001256	583.2728743566455	74.955	0.61811	75.52	75.008	75.626	0.56458					17	14	2	0	0	0	0.37624	1	8433	8433		38.754	3.6016	1	222930			56832	4922	38000	38015	64265	64265					-0.049821697091147144
TDTKAPIDT	9	Unmodified	_TDTKAPIDT_					0	0	0		nc|ENSG00000145555|Q9HD67-3|MYO10;ENSG00000145555|ENST00000513610|MYO10	nc|ENSG00000145555|Q9HD67-3|MYO10	nc|ENSG00000145555|Q9HD67-3|MYO10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.2444763183594	2	481.245472	960.476391	-0.28493	-0.00013712	0.39871	0.00019188	0.11378	5.4758E-05	481.2455876545853	21.634	0.56738	21.57	21.308	21.875	-0.064743					27	17	2	0	0	0	0.64555	1	643	643		44.377	7.2181	1	42453			56833	4776	38001	38016	64266	64266					-0.0054283292729451205
TDTKKKKIN	9	Unmodified	_TDTKKKKIN_					0	0	0		nc|ENSG00000174450|Q8N9W4-2|GOLGA6L2;nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2;ENSG00000174450|ENST00000567107|GOLGA6L2;ENST00000559740.5_1_15:23097072-23099206:+|nuORF;ENST00000560434.1_1_15:23097072-23098551:+|nuORF;ENSG00000261649|ENST00000567390|GOLGA6L7	nc|ENSG00000174450|Q8N9W4-2|GOLGA6L2	nc|ENSG00000174450|Q8N9W4-2|GOLGA6L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3270263671875	2	538.327131	1074.63971	1.246	0.00067076	-1.73	-0.00093129	-0.48397	-0.00026053	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.78536	1	10989	10989		29.15	3.6994	1	76567000			56834	6935	38002	38017	64267	64267					0.10537389914429696
TDVLARVR	8	Unmodified	_TDVLARVR_					0	0	0			REV__nc|ENSG00000180861|Q495D7|LINC01559	REV__nc|ENSG00000180861|Q495D7|LINC01559	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.28045654296875	2	465.279983	928.545414	-1.728	-0.00080402	1.7949	0.00083513	0.066852	3.1105E-05	465.28067924301723	88.748	2.0508	88.921	88.498	90.549	0.17234					103	47	4	0	0	0	0.87922	1	8833	8833		31.955	0	1	1028800	+		56835	30071	38003	38018	64268	64268					0.07828295882950442
TDVPLNTPLE	10	Unmodified	_TDVPLNTPLE_					0	0	0			REV__ENSG00000183423|ENST00000594814|LRIT3	REV__ENSG00000183423|ENST00000594814|LRIT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	549.7870483398438	2	549.787504	1097.56045	1.2732	0.0007	-2.4792	-0.001363	-1.206	-0.00066304	549.7860869616688	110.33	0.93375	110.36	110.1	111.04	0.031746					41	28	2	0	0	0	0.82886	1	12078	12078		37.812	6.2817	1	208930	+		56836	22605	38004	38019	64269	64269					0.015576981696312941
TDYIVYMD	8	Unmodified	_TDYIVYMD_					0	0	0		ENSG00000007933|ENST00000367755|FMO3	ENSG00000007933|ENST00000367755|FMO3	ENSG00000007933|ENST00000367755|FMO3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.222900390625	2	510.223151	1018.43175	1.4058	0.00071727	-1.9416	-0.00099066	-0.53583	-0.00027339	510.22200691810997	92.893	1.7711	93.34	92.349	94.12	0.44661					97	41	3	0	0	0	0.87922	1	11066	11066		31.955	0	1	1371800			56837	730	38005	38020	64270	64270					-0.07672980064978674
TDYNTVMRLF	10	Oxidation (M)	_TDYNTVM(Oxidation (M))RLF_		TDYNTVM(1)RLF		TDYNTVM(55)RLF	0	0	1		ENST00000358755.4_1_8:104330977-104336740:+|nuORF	ENST00000358755.4_1_8:104330977-104336740:+|nuORF	ENST00000358755.4_1_8:104330977-104336740:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	638.3073120117188	2	638.305538	1274.59652	0.12451	7.9476E-05	0.34931	0.00022297	0.47382	0.00030244	638.305648615345	78.174	0.87143	78.58	78.223	79.094	0.40531					48	20	3	0	0	0	0.51302	1	8940	8940		54.776	19.158	1	403920			56838	10418	38006	38021	64271	64271		172			-0.029791679251957248
TDYNTVMRLF	10	Oxidation (M)	_TDYNTVM(Oxidation (M))RLF_					0	0	1		ENST00000358755.4_1_8:104330977-104336740:+|nuORF	ENST00000358755.4_1_8:104330977-104336740:+|nuORF	ENST00000358755.4_1_8:104330977-104336740:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	638.305538	1274.59652	1.2037	0.00076834	-0.65646	-0.00041902	0.54725	0.00034931	638.3050492725451	78.106	0.74376	78.669	78.335	79.079	0.56332	0.044856	-0.00036321	NaN	54.776	38	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	500400			56839	10418	38006	38021				172			-0.029791679251957248
TEADVEEALRL	11	Unmodified	_TEADVEEALRL_					0	0	0		ENST00000493076.5_1_22:35806581-35817581:+|nuORF;ENSG00000100297|ENST00000216122|MCM5	ENST00000493076.5_1_22:35806581-35817581:+|nuORF	ENST00000493076.5_1_22:35806581-35817581:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.3171997070312	2	623.319699	1244.62485	0.56842	0.00035431	0.28725	0.00017905	0.85568	0.00053336	623.3194907378106	66.264	0.80771	66.65	66.316	67.124	0.38582					52	21	3	0	0	0	0.13035	2	7223	7214;7223		85.862	31.086	1	632010			56840	12716	38007	38022	64272;64273	64273					0.012318532557628714
TEADVEEALRL	11	Unmodified	_TEADVEEALRL_					0	0	0		ENST00000493076.5_1_22:35806581-35817581:+|nuORF;ENSG00000100297|ENST00000216122|MCM5	ENST00000493076.5_1_22:35806581-35817581:+|nuORF	ENST00000493076.5_1_22:35806581-35817581:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	623.8212890625	2	623.319699	1244.62485	0.71159	0.00044355	-0.006476	-4.0366E-06	0.70512	0.00043951	623.3194540871402	66.11	0.84105	66.662	66.381	67.222	0.5526					45	23	3	0	0	0	0.32097	1	7225	7225		70.399	15.622	1	515350			56841	12716	38007	38022	64274	64274					0.012318532557628714
TEAFFYFESVK	11	Unmodified	_TEAFFYFESVK_					0	0	0		nc|ENSG00000122126|Q01968-2|OCRL;ENSG00000122126|ENST00000371113|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	nc|ENSG00000122126|Q01968-2|OCRL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.793212890625	3	456.555449	1366.64452	1.3487	0.00061576	0.27372	0.00012497	1.6224	0.00074073	456.555641511008	35.621	0.22608	36.011	35.909	36.135	0.39024					9	5	3	0	0	0	0.17586	1	2763	2763		8.0344	0	1	72099			56842	3211	38008	38023	64275	64275					-0.024137707335057712
TEAFISAA	8	Unmodified	_TEAFISAA_					0	0	0			REV__ENST00000570209.1_1_15:31108772-31126588:+|nuORF	REV__ENST00000570209.1_1_15:31108772-31126588:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.20416259765625	2	405.205618	808.396684	-0.0495	-2.0058E-05	-2.1856	-0.00088563	-2.2351	-0.00090569	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.81548	1	7721	7721		20.482	2.1574	1	162370	+		56843	28921	38009	38024	64276	64276					-0.0151785481062916
TEAGEVREELL	11	Unmodified	_TEAGEVREELL_					0	0	0			REV__nc|ENSG00000114098|Q8IUR7-7|ARMC8	REV__nc|ENSG00000114098|Q8IUR7-7|ARMC8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	623.316650390625	2	623.319699	1244.62485	0.71159	0.00044355	-0.006476	-4.0366E-06	0.70512	0.00043951	623.3194540871402	66.11	0.84105	66.662	66.381	67.222	0.5526					45	23	3	0	0	0	0.45992	1	7242	7242		54.722	11.858	1	515350	+		56844	18029	38010	38025	64277	64277					0.012318532557628714
TEALSWRRG	9	Unmodified	_TEALSWRRG_					0	0	0		ENST00000585780.5_1_17:43339330-43339522:+|nuORF	ENST00000585780.5_1_17:43339330-43339522:+|nuORF	ENST00000585780.5_1_17:43339330-43339522:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.7680053710938	2	538.285797	1074.55704	-1.4582	-0.00078493	-0.78147	-0.00042066	-2.2397	-0.0012056	538.7853413764415	44.714	0.24777	45.558	45.419	45.667	0.84438					10	5	3	0	0	0	0.20789	1	4126	4126		40.778	0	1	114540			56845	14153	38011	38026	64278	64278					0.022744929062810115
TEAPGHGRTTL	11	Unmodified	_TEAPGHGRTTL_					0	0	0			REV__ENSG00000135077|ENST00000307851|HAVCR2	REV__ENSG00000135077|ENST00000307851|HAVCR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.2944946289062	2	570.293819	1138.57309	0.12101	6.9013E-05	2.8919	0.0016492	3.0129	0.0017182	570.2953055763262	62.015	0.69638	61.982	61.637	62.333	-0.033173					55	25	3	0	0	0	0.32541	2	5876	5856;5876		68.846	7.8742	1	814620	+		56846	19189	38012	38027	64279;64280	64280					0.009341543525124507
TEAPGHGRTTL	11	Unmodified	_TEAPGHGRTTL_					0	0	0			REV__ENSG00000135077|ENST00000307851|HAVCR2	REV__ENSG00000135077|ENST00000307851|HAVCR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.2952270507812	2	570.293819	1138.57309	0.47186	0.0002691	2.7115	0.0015463	3.1833	0.0018154	570.2951038965308	61.928	0.56001	62.035	61.772	62.332	0.10743					50	24	3	0	0	0	0.33509	1	5387	5387		65.465	14.13	1	602680	+		56847	19189	38012	38027	64281	64281					0.009341543525124507
TEAPGHGRTTL	11	Unmodified	_TEAPGHGRTTL_					0	0	0			REV__ENSG00000135077|ENST00000307851|HAVCR2	REV__ENSG00000135077|ENST00000307851|HAVCR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.7993774414062	2	570.293819	1138.57309	0.52087	0.00029705	2.2738	0.0012968	2.7947	0.0015938	570.2950227593519	61.904	0.63083	62.025	61.702	62.333	0.1209					52	26	3	0	0	0	0.53361	1	5401	5401		49.536	0.094497	1	523140	+		56848	19189	38012	38027	64282	64282					0.009341543525124507
TEAPRTSKTG	10	Unmodified	_TEAPRTSKTG_					0	0	0		nc|ENSG00000147789|P17097-3|ZNF7	nc|ENSG00000147789|P17097-3|ZNF7	nc|ENSG00000147789|P17097-3|ZNF7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2785034179688	2	524.275095	1046.53564	0.77594	0.00040681	2.6299	0.0013788	3.4058	0.0017856	524.2765116769002	25.659	3.3591	25.402	24.41	27.769	-0.25721					213	75	6	0	0	0	0.76096	1	1457	1457		41.427	9.8968	1	20447000			56849	14980	38013	38028	64283	64283					0.01423063086917864
TEARFGAQL	9	Unmodified	_TEARFGAQL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.7615966796875	2	496.761623	991.508694	-1.6137	-0.00080165	-0.045943	-2.2823E-05	-1.6597	-0.00082447	496.76134511049366	43.943	0.80543	44.717	44.424	45.23	0.7738					32	19	3	0	0	0	0.15708	2	4017	4017;4031		82.75	29.399	1	886130		+	56850	591	38014	38029	64284;64285	64284					0.012599992663922421
TEAVEDLTTTL	11	Unmodified	_TEAVEDLTTTL_					0	0	0		nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF	nc|ENSG00000137076|Q9Y490-2|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.8010864257812	2	596.800808	1191.58706	-0.74076	-0.00044209	1.0615	0.00063353	0.32078	0.00019144	596.8013272038422	72.904	0.84294	73.289	72.917	73.76	0.38581					64	20	5	0	0	0	9.971399999999999E-136	5	8174	8139;8149;8162;8174;8186		245.03	143.43	1	2918400			56851	4170	38015	38030	64286;64287;64288;64289;64290	64289					-0.0010665772972515697
TEAVEDLTTTL	11	Unmodified	_TEAVEDLTTTL_					0	0	0		nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF	nc|ENSG00000137076|Q9Y490-2|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.8009033203125	2	596.800808	1191.58706	-0.12612	-7.5268E-05	0.38975	0.0002326	0.26363	0.00015734	596.8009362001125	72.781	0.84256	73.335	72.984	73.827	0.55386					59	20	4	0	0	0	9.1154E-79	6	8174	8153;8162;8174;8186;8198;8211		214.23	123.86	1	3199700			56852	4170	38015	38030	64291;64292;64293;64294;64295;64296	64293					-0.0010665772972515697
TEAWLQEKL	9	Unmodified	_TEAWLQEKL_					0	0	0		ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF;ENST00000598034.5_1_19:39819119-39819212:-|nuORF	ENSG00000130755|ENST00000597595|GMFG	ENSG00000130755|ENST00000597595|GMFG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.2996826171875	2	559.298039	1116.58152	-0.42129	-0.00023563	1.2175	0.00068094	0.79621	0.00044532	559.2985614769491	59.28	1.3239	59.67	59.399	60.723	0.39077					41	32	2	0	0	0	0.045756	1	6241	6241		109.48	33.309	1	451590			56853	3678	38016	38031	64297	64297					0.027897082691424657
TECVDCME	8	Unmodified	_TECVDCME_					0	0	0			REV__nc|ENSG00000120733|Q7LBC6-3|KDM3B	REV__nc|ENSG00000120733|Q7LBC6-3|KDM3B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2525329589844	2	465.156096	928.29764	0.22417	0.00010427	-2.355	-0.0010954	-2.1308	-0.00099117	465.15487967899764	86.65	1.2449	86.705	86.356	87.601	0.055649					48	28	2	0	0	0	0.4196	1	8871	8871		12.207	5.0135	1	100080	+		56854	18427	38017	38032	64298	64298					-0.1693770515369124
TECVDCME	8	Unmodified	_TECVDCME_					0	0	0			REV__nc|ENSG00000120733|Q7LBC6-3|KDM3B	REV__nc|ENSG00000120733|Q7LBC6-3|KDM3B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	465.156096	928.29764	-0.11945	-5.5561E-05	-2.292	-0.0010661	-2.4114	-0.0011217	465.1549857800369	86.862	1.3813	86.93	86.537	87.918	0.067444	0.11221	0.00029074	NaN	12.207	48	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100580	+		56855	18427	38017	38032							-0.1693770515369124
TECVDCME	8	Unmodified	_TECVDCME_					0	0	0			REV__nc|ENSG00000120733|Q7LBC6-3|KDM3B	REV__nc|ENSG00000120733|Q7LBC6-3|KDM3B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	465.156096	928.29764	1.0415	0.00048448	-3.1794	-0.0014789	-2.1379	-0.00099446	465.15458331565907	86.892	1.4131	86.818	86.355	87.768	-0.073997	0.00029744	-0.00053486	NaN	12.207	54	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119100	+		56856	18427	38017	38032							-0.1693770515369124
TEDEGDLAK	9	Unmodified	_TEDEGDLAK_					0	0	0		ENST00000463720.5_1_9:35616022-35616067:-|nuORF	ENST00000463720.5_1_9:35616022-35616067:-|nuORF	ENST00000463720.5_1_9:35616022-35616067:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.2240295410156	2	489.224736	976.43492	-0.25906	-0.00012674	0.15253	7.4619E-05	-0.10654	-5.2121E-05	489.2247267397948	23.026	1.1274	22.974	22.425	23.553	-0.052114					69	38	3	0	0	0	0.71772	1	811	811		39.253	5.0803	1	180890			56857	12073	38018	38033	64299	64299					-0.05424013686615581
TEDEKAAEKL	10	Unmodified	_TEDEKAAEKL_					0	0	0			REV__nc|ENSG00000022567|Q5BKX6|SLC45A4	REV__nc|ENSG00000022567|Q5BKX6|SLC45A4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.287109375	2	567.287868	1132.56118	-0.36402	-0.0002065	1.0881	0.00061727	0.7241	0.00041077	567.2884336656869	109.89	0.82098	109.89	109.64	110.46	0					54	33	2	0	0	0	0.86106	1	11399	11399		33.922	2.2874	1	469710	+		56858	16244	38019	38034	64300	64300					0.00020492818657658063
TEDELQDK	8	Unmodified	_TEDELQDK_					0	0	0		CON__P02666	CON__P02666	CON__P02666	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.22454833984375	2	489.224736	976.43492	0.81248	0.00039748	-0.90442	-0.00044246	-0.091941	-4.498E-05	489.2241643158015	22.39	0.83156	22.455	22.113	22.944	0.064745					61	30	3	0	0	0	0.38462	2	689	677;689		93.195	7.836	1	126500		+	56859	582	38020	38035	64301;64302	64302					-0.05424013686604212
TEDELQDK	8	Unmodified	_TEDELQDK_					0	0	0		CON__P02666	CON__P02666	CON__P02666	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.2242126464844	2	489.224736	976.43492	-0.25906	-0.00012674	0.15253	7.4619E-05	-0.10654	-5.2121E-05	489.2247267397948	23.026	1.1274	22.974	22.425	23.553	-0.052114					69	38	3	0	0	0	0.36517	4	788	772;788;796;804		82.241	24.429	1	180890		+	56860	582	38020	38035	64303;64304;64305;64306	64304					-0.05424013686604212
TEDELQDK	8	Unmodified	_TEDELQDK_					0	0	0		CON__P02666	CON__P02666	CON__P02666	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.22412109375	2	489.224736	976.43492	-1.3762	-0.00067326	1.498	0.00073288	0.12187	5.9624E-05	489.22532307064523	22.996	1.091	22.946	22.505	23.596	-0.050077					72	40	3	0	0	0	0.37729	3	730	721;730;737		95.815	14.057	1	149760		+	56861	582	38020	38035	64307;64308;64309	64308					-0.05424013686604212
TEDELQDK	8	Unmodified	_TEDELQDK_					0	0	0		CON__P02666	CON__P02666	CON__P02666	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	489.224736	976.43492	1.1424	0.00055891	-1.6597	-0.00081196	-0.51725	-0.00025305	489.2237418318331	23.736	0.67668	23.162	22.878	23.555	-0.57415	0.13497	-0.0021253	NaN	82.241	27	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110340		+	56862	582	38020	38035							-0.05424013686604212
TEDGDSFLHL	10	Unmodified	_TEDGDSFLHL_					0	0	0		ENST00000555629.1_1_14:35872865-35873850:-|nuORF;ENST00000557100.5_1_14:35871861-35873850:-|nuORF;ENST00000557459.1_1_14:35872311-35873850:-|nuORF;ENSG00000100906|ENST00000216797|NFKBIA	ENST00000555629.1_1_14:35872865-35873850:-|nuORF	ENST00000555629.1_1_14:35872865-35873850:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.2591552734375	2	567.259111	1132.50367	0.47675	0.00027044	-0.63121	-0.00035806	-0.15445	-8.7615E-05	567.2585422770658	66.353	0.73166	66.739	66.392	67.124	0.38581					47	19	3	0	0	0	0.28217	1	7229	7229		74.255	19.479	1	423320			56863	1882	38021	38036	64310	64310					-0.05728349386890841
TEDGDSFLHL	10	Unmodified	_TEDGDSFLHL_					0	0	0		ENST00000555629.1_1_14:35872865-35873850:-|nuORF;ENST00000557100.5_1_14:35871861-35873850:-|nuORF;ENST00000557459.1_1_14:35872311-35873850:-|nuORF;ENSG00000100906|ENST00000216797|NFKBIA	ENST00000555629.1_1_14:35872865-35873850:-|nuORF	ENST00000555629.1_1_14:35872865-35873850:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.2601318359375	2	567.259111	1132.50367	0.76999	0.00043678	0.28534	0.00016186	1.0553	0.00059864	567.2588745814032	66.233	0.62698	66.783	66.484	67.111	0.55071					39	16	3	0	0	0	0.46422	3	7243	7243;7254;7266		58.782	18.004	1	439940			56864	1882	38021	38036	64311;64312;64313	64311					-0.05728349386890841
TEDGGNGIKL	10	Unmodified	_TEDGGNGIKL_					0	0	0		ENSG00000162434|ENST00000342505|JAK1	ENSG00000162434|ENST00000342505|JAK1	ENSG00000162434|ENST00000342505|JAK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.25604248046875	2	502.256371	1002.49819	-0.85633	-0.0004301	1.3368	0.00067141	0.48046	0.00024132	502.2566498556514	39.161	0.91041	39.716	39.401	40.311	0.55449					70	20	5	0	0	0	0.20373	1	3286	3286		85.161	0.2453	1	948830			56865	5690	38022	38037	64314	64314					-0.0029602817870681974
TEDKILHIVIK	11	Unmodified	_TEDKILHIVIK_					0	0	0		nc|ENSG00000137094|O75953|DNAJB5;ENSG00000137094|ENST00000682809|DNAJB5;nc|ENSG00000137094|O75953-5|DNAJB5	nc|ENSG00000137094|O75953|DNAJB5	nc|ENSG00000137094|O75953|DNAJB5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.93389892578125	3	436.934372	1307.78129	0.49799	0.00021759	-1.4261	-0.0006231	-0.92809	-0.00040551	436.93369927878706	20.732	2.5953	20.273	19.595	22.19	-0.4591					152	59	4	0	0	0	0.70278	1	703	703		31.068	0	1	492360			56866	4171	38023	38038	64315	64315					0.13970763216889281
TEDMVSQLH	9	Unmodified	_TEDMVSQLH_					0	0	0		nc|ENSG00000145439|Q8N4T8-2|CBR4;ENSG00000145439|ENST00000306193|CBR4	nc|ENSG00000145439|Q8N4T8-2|CBR4	nc|ENSG00000145439|Q8N4T8-2|CBR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2403564453125	2	530.242406	1058.47026	-0.033627	-1.783E-05	-2.5928	-0.0013748	-2.6264	-0.0013926	530.240968765566	111.53	2.3024	111.47	110.12	112.42	-0.059937					158	81	3	0	0	0	0.67345	1	12130	12130		42.396	0.96952	1	182550			56867	4772	38024	38039	64316	64316					-0.05663674430456922
TEDRLEQL	8	Unmodified	_TEDRLEQL_					0	0	0		ENST00000380874.3_1_6:1612095-1612257:+|nuORF	ENST00000380874.3_1_6:1612095-1612257:+|nuORF	ENST00000380874.3_1_6:1612095-1612257:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.2562561035156	2	502.256371	1002.49819	-0.85633	-0.0004301	1.3368	0.00067141	0.48046	0.00024132	502.2566498556514	39.161	0.91041	39.716	39.401	40.311	0.55449					70	20	5	0	0	0	0.20947	1	3274	3274		108.09	6.4868	1	948830			56868	10937	38025	38040	64317	64317					-0.0029602817870681974
TEDRLEQL	8	Unmodified	_TEDRLEQL_					0	0	0		ENST00000380874.3_1_6:1612095-1612257:+|nuORF	ENST00000380874.3_1_6:1612095-1612257:+|nuORF	ENST00000380874.3_1_6:1612095-1612257:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	502.256371	1002.49819	0.21	0.00010547	5.0602	0.0025415	5.2702	0.002647	502.2595832554565	39.745	0.77517	39.715	39.114	39.889	-0.03027	0.10599	0.0030332	NaN	108.09	24	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80223			56869	10937	38025	38040							-0.0029602817870681974
TEDRLEQL	8	Unmodified	_TEDRLEQL_					0	0	0		ENST00000380874.3_1_6:1612095-1612257:+|nuORF	ENST00000380874.3_1_6:1612095-1612257:+|nuORF	ENST00000380874.3_1_6:1612095-1612257:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	502.256371	1002.49819	-1.1701	-0.00058769	4.3341	0.0021769	3.1641	0.0015892	502.2599622305504	39.449	0.96609	39.402	38.867	39.833	-0.047005	-0.20623	0.0023038	NaN	108.09	43	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80739			56870	10937	38025	38040							-0.0029602817870681974
TEDRLEQL	8	Unmodified	_TEDRLEQL_					0	0	0		ENST00000380874.3_1_6:1612095-1612257:+|nuORF	ENST00000380874.3_1_6:1612095-1612257:+|nuORF	ENST00000380874.3_1_6:1612095-1612257:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	502.256371	1002.49819	-2.3741	-0.0011924	2.7686	0.0013905	0.39453	0.00019815	502.2579206320819	39.607	0.43018	39.616	39.343	39.773	0.0092812	0.0076302	0.00073121	NaN	108.09	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51692			56871	10937	38025	38040							-0.0029602817870681974
TEDRLEQL	8	Unmodified	_TEDRLEQL_					0	0	0		ENST00000380874.3_1_6:1612095-1612257:+|nuORF	ENST00000380874.3_1_6:1612095-1612257:+|nuORF	ENST00000380874.3_1_6:1612095-1612257:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	502.256371	1002.49819	-1.5118	-0.00075933	1.7575	0.00088271	0.24566	0.00012338	502.25686185775766	39.226	0.97117	39.594	39.342	40.313	0.36797	-0.014585	-0.00028446	NaN	108.09	66	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	604980			56872	10937	38025	38040							-0.0029602817870681974
TEDRPKNAKQK	11	Unmodified	_TEDRPKNAKQK_					0	0	0		ENST00000528393.1_1_11:79699022-79699172:+|nuORF	ENST00000528393.1_1_11:79699022-79699172:+|nuORF	ENST00000528393.1_1_11:79699022-79699172:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.9129333496094	3	438.908997	1313.70516	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.271	1	29.302	28.802	29.802	0.030945								0	0	0	0.56276	1	1436	1436		21.032	1.0018	1				56873	13301	38026	38041	64318	64318					0.06085759369466359
TEDTVKLNRPA	11	Unmodified	_TEDTVKLNRPA_					0	0	0			REV__ENSG00000111799|ENST00000322507|COL12A1	REV__ENSG00000111799|ENST00000322507|COL12A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3374633789062	2	622.335684	1242.65681	0.74466	0.00046343	0.55512	0.00034547	1.2998	0.0008089	622.3359336056161	110.94	1.6886	110.97	110.28	111.96	0.031738					155	57	4	0	0	0	0.78683	1	12237	12237		2.7184	0	1	299380	+		56874	17895	38027	38042	64319	64319					0.04519265729572908
TEEDVKFYL	9	Unmodified	_TEEDVKFYL_					0	0	0		ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-3|RPS6KA1;ENSG00000071242|ENST00000265678|RPS6KA2;nc|ENSG00000071242|Q15349-3|RPS6KA2;nc|ENSG00000071242|Q15349-2|RPS6KA2;ENST00000474934.1_1_1:26877949-26879989:+|nuORF;ENST00000527264.5_1_1:26873736-26880810:+|nuORF;nc|ENSG00000072133|Q9UK32-2|RPS6KA6;ENSG00000072133|ENST00000262752|RPS6KA6;nc|ENSG00000117676|Q15418-4|RPS6KA1;ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1	ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-4|RPS6KA1	nc|ENSG00000117676|Q15418-4|RPS6KA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.281494140625	2	572.282054	1142.54956	-0.68801	-0.00039374	0.7665	0.00043865	0.07849	4.4918E-05	572.2823535347836	63.879	1.3601	64.266	63.833	65.193	0.3868					66	31	3	0	0	0	0.017216	3	6881	6863;6881;6892		127.46	45.608	1	794650			56875	7125;2996	38028	38043	64320;64321;64322	64321					-0.016017042046541974
TEEDVKFYL	9	Unmodified	_TEEDVKFYL_					0	0	0		ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-3|RPS6KA1;ENSG00000071242|ENST00000265678|RPS6KA2;nc|ENSG00000071242|Q15349-3|RPS6KA2;nc|ENSG00000071242|Q15349-2|RPS6KA2;ENST00000474934.1_1_1:26877949-26879989:+|nuORF;ENST00000527264.5_1_1:26873736-26880810:+|nuORF;nc|ENSG00000072133|Q9UK32-2|RPS6KA6;ENSG00000072133|ENST00000262752|RPS6KA6;nc|ENSG00000117676|Q15418-4|RPS6KA1;ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1	ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-4|RPS6KA1	nc|ENSG00000117676|Q15418-4|RPS6KA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.28173828125	2	572.282054	1142.54956	0.43104	0.00024668	-0.24525	-0.00014035	0.1858	0.00010633	572.2816733619766	63.723	1.1033	64.277	63.879	64.982	0.5545					68	25	4	0	0	0	0.059135	2	6882	6871;6882		104.06	30.082	1	840360			56876	7125;2996	38028	38043	64323;64324	64324					-0.016017042046541974
TEEDVKFYL	9	Unmodified	_TEEDVKFYL_					0	0	0		ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-3|RPS6KA1;ENSG00000071242|ENST00000265678|RPS6KA2;nc|ENSG00000071242|Q15349-3|RPS6KA2;nc|ENSG00000071242|Q15349-2|RPS6KA2;ENST00000474934.1_1_1:26877949-26879989:+|nuORF;ENST00000527264.5_1_1:26873736-26880810:+|nuORF;nc|ENSG00000072133|Q9UK32-2|RPS6KA6;ENSG00000072133|ENST00000262752|RPS6KA6;nc|ENSG00000117676|Q15418-4|RPS6KA1;ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1	ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-4|RPS6KA1	nc|ENSG00000117676|Q15418-4|RPS6KA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	572.282054	1142.54956	-1.0889	-0.00062315	2.4288	0.00139	1.3399	0.00076681	572.2836696313813	64.495	0.46756	64.495	64.307	64.775	-0.00078583	0.16089	0.0020835	NaN	127.46	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57499			56877	7125;2996	38028	38043							-0.016017042046541974
TEEDVKFYL	9	Unmodified	_TEEDVKFYL_					0	0	0		ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-3|RPS6KA1;ENSG00000071242|ENST00000265678|RPS6KA2;nc|ENSG00000071242|Q15349-3|RPS6KA2;nc|ENSG00000071242|Q15349-2|RPS6KA2;ENST00000474934.1_1_1:26877949-26879989:+|nuORF;ENST00000527264.5_1_1:26873736-26880810:+|nuORF;nc|ENSG00000072133|Q9UK32-2|RPS6KA6;ENSG00000072133|ENST00000262752|RPS6KA6;nc|ENSG00000117676|Q15418-4|RPS6KA1;ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1	ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-4|RPS6KA1	nc|ENSG00000117676|Q15418-4|RPS6KA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	572.282054	1142.54956	-0.074956	-4.2896E-05	1.7088	0.0009779	1.6338	0.00093501	572.2830499291427	64.356	0.34531	64.321	64.179	64.525	-0.034256	-0.012398	0.0012594	NaN	127.46	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81166			56878	7125;2996	38028	38043							-0.016017042046541974
TEEDVKFYL	9	Unmodified	_TEEDVKFYL_					0	0	0		ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-3|RPS6KA1;ENSG00000071242|ENST00000265678|RPS6KA2;nc|ENSG00000071242|Q15349-3|RPS6KA2;nc|ENSG00000071242|Q15349-2|RPS6KA2;ENST00000474934.1_1_1:26877949-26879989:+|nuORF;ENST00000527264.5_1_1:26873736-26880810:+|nuORF;nc|ENSG00000072133|Q9UK32-2|RPS6KA6;ENSG00000072133|ENST00000262752|RPS6KA6;nc|ENSG00000117676|Q15418-4|RPS6KA1;ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1	ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-4|RPS6KA1	nc|ENSG00000117676|Q15418-4|RPS6KA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	572.282054	1142.54956	-0.24014	-0.00013743	1.7062	0.00097641	1.466	0.00083899	572.2831707188085	64.282	0.48206	64.309	64.027	64.51	0.027145	-0.024496	0.0012565	NaN	127.46	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60616			56879	7125;2996	38028	38043							-0.016017042046541974
TEEEQKTVAL	10	Unmodified	_TEEEQKTVAL_					0	0	0		ENSG00000179144|ENST00000313543|GIMAP7	ENSG00000179144|ENST00000313543|GIMAP7	ENSG00000179144|ENST00000313543|GIMAP7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.295654296875	2	574.295693	1146.57683	0.03328	1.9112E-05	-0.57675	-0.00033123	-0.54347	-0.00031211	574.2952518869272	36.991	0.86442	37.273	36.809	37.674	0.28173					44	20	3	0	0	0	0.31985	2	2945	2921;2945		70.816	12.586	1	475410			56880	7249	38029	38044	64325;64326	64326					0.009407793357240735
TEEEQKTVAL	10	Unmodified	_TEEEQKTVAL_					0	0	0		ENSG00000179144|ENST00000313543|GIMAP7	ENSG00000179144|ENST00000313543|GIMAP7	ENSG00000179144|ENST00000313543|GIMAP7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.2965087890625	2	574.295693	1146.57683	0.95468	0.00054827	-1.2908	-0.00074128	-0.33609	-0.00019301	574.2946745743023	36.874	0.95408	37.359	36.916	37.87	0.48581					55	22	4	0	0	0	0.36572	1	2933	2933		66.962	10.241	1	489250			56881	7249	38029	38044	64327	64327					0.009407793357240735
TEEIAFLL	8	Unmodified	_TEEIAFLL_					0	0	0			REV__ENST00000466609.1_1_3:98378565-98379411:+|nuORF	REV__ENST00000466609.1_1_3:98378565-98379411:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.25823974609375	2	468.257851	934.501149	1.2763	0.00059762	-1.063	-0.00049777	0.21324	9.9852E-05	468.2572045606824	99.029	2.0924	99.391	99.016	101.11	0.36137					103	52	4	0	0	0	0.93529	1	11971	11971		52.299	2.2746	1	3431000	+		56882	16771	38030	38045	64328	64328					0.03127846946108548
TEELIVIQ	8	Unmodified	_TEELIVIQ_					0	0	0			REV__ENSG00000120262|ENST00000239374|CCDC170	REV__ENSG00000120262|ENST00000239374|CCDC170	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7672119140625	2	472.768583	943.522613	0.62555	0.00029574	-3.4442	-0.0016283	-2.8187	-0.0013326	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.88915	1	8182	8182		35.201	0	1	508030	+		56883	18404	38031	38046	64329	64329					0.04859231974819522
TEEQIVNL	8	Unmodified	_TEEQIVNL_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.25115966796875	2	473.248015	944.481476	-0.51455	-0.00024351	0.54458	0.00025772	0.030035	1.4214E-05	473.24818540235697	28.981	1.8023	28.961	28.523	30.325	-0.019407					101	54	4	0	0	0	0.83456	1	1408	1408		60.972	4.2509	1	574970	+		56884	23707	38032	38047	64330	64330					0.00701470935348425
TEEVAKNLL	9	Unmodified	_TEEVAKNLL_					0	0	0		nc|ENSG00000197217|Q9Y227-2|ENTPD4	nc|ENSG00000197217|Q9Y227-2|ENTPD4	nc|ENSG00000197217|Q9Y227-2|ENTPD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.78326416015625	2	508.784764	1015.55498	-1.5374	-0.00078218	0.069339	3.5278E-05	-1.468	-0.0007469	508.7847523224276	42.315	0.89218	42.73	42.468	43.36	0.41553					45	21	3	0	0	0	0.084975	1	3761	3761		96.19	11.275	1	1231100			56885	15190	38033	38048	64331	64331					0.04782019377819324
TEFELALL	8	Unmodified	_TEFELALL_					0	0	0			REV__ENST00000326685.11_1_5:148521088-148521160:+|nuORF	REV__ENST00000326685.11_1_5:148521088-148521160:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.2585144042969	2	468.257851	934.501149	1.2763	0.00059762	-1.063	-0.00049777	0.21324	9.9852E-05	468.2572045606824	99.029	2.0924	99.391	99.016	101.11	0.36137					103	52	4	0	0	0	0.17314	1	11959	11959		109.7	26.417	1	3431000	+		56886	25079	38034	38049	64332	64332					0.031278469460858105
TEFKKVTPL	9	Unmodified	_TEFKKVTPL_					0	0	0		ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.30029296875	2	531.813325	1061.6121	3.3815	0.0017983	2.7758	0.0014762	6.1573	0.0032745	531.8145891659246	114.08	0.36887	114.06	113.91	114.28	-0.024452					13	11	2	0	0	0	0.20789	1	12624	12624		10.866	0	1	48364			56887	7667	38035	38050	64333	64333					0.08375486654176711
TEGELSGQTIK	11	Unmodified	_TEGELSGQTIK_					0	0	0		ENST00000205061.9_2_16:74483815-74483935:-|nuORF	ENST00000205061.9_2_16:74483815-74483935:-|nuORF	ENST00000205061.9_2_16:74483815-74483935:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.8035278320312	2	581.801143	1161.58773	0.11403	6.6344E-05	4.3387	0.0025242	4.4527	0.0025906	581.8035838058198	64.735	1.1415	64.7	64.269	65.41	-0.034798					108	38	4	0	0	0	0.22372	1	6191	6191		78.264	0.9462	1	2150000			56888	9104	38036	38051	64334	64334					0.013401817100202607
TEGEQISQLI	10	Unmodified	_TEGEQISQLI_					0	0	0		ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.29052734375	2	559.290411	1116.56627	-0.060928	-3.4076E-05	-0.047323	-2.6468E-05	-0.10825	-6.0544E-05	559.2902950832719	77.079	1.0886	77.647	77.332	78.421	0.56836					71	26	4	0	0	0	0.21391	1	8776	8776		82.75	2.2959	1	4085400			56889	6723	38037	38052	64335	64335					0.012647966813119638
TEGIWQLV	8	Unmodified	_TEGIWQLV_					0	0	0		nc|ENSG00000087206|Q96RL1-2|UIMC1;nc|ENSG00000087206|Q96RL1-3|UIMC1;ENSG00000087206|ENST00000511320|UIMC1	nc|ENSG00000087206|Q96RL1-2|UIMC1	nc|ENSG00000087206|Q96RL1-2|UIMC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.2333984375	2	473.255643	944.496732	-2.2985	-0.0010878	1.8081	0.00085567	-0.49048	-0.00023212	473.25621057025074	39.653	0.64612	39.662	39.428	40.074	0.0092812					25	14	2	0	0	0	0.4196	1	2832	2832		25.45	6.0902	1	90661			56890	1571	38038	38053	64336	64336					0.022263825231902956
TEGPVVKL	8	Unmodified	_TEGPVVKL_					0	0	0			REV__nc|ENSG00000125885|Q9UJA3-2|MCM8	REV__nc|ENSG00000125885|Q9UJA3-2|MCM8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7521667480469	2	421.752736	841.490919	-1.7853	-0.00075295	-1.0169	-0.00042889	-2.8022	-0.0011818	421.75222562050067	74.965	1.8809	75.091	73.889	75.77	0.12545					84	60	2	0	0	0	0.87922	1	7000	7000		31.955	0	1	102790	+		56891	29825	38039	38054	64337	64337					0.06383284011531032
TEGRGRLQER	10	Unmodified	_TEGRGRLQER_					0	0	0			REV__ENST00000296380.8_1_1:40974436-40975435:+|nuORF	REV__ENST00000296380.8_1_1:40974436-40975435:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	601.8577270507812	2	601.323442	1200.63233	1.0033	0.00060329	2.294	0.0013794	3.2973	0.0019827	601.8268467976409	103.13	0.2336	103.32	103.12	103.36	0.18297					7	5	2	0	0	0	0.37624	1	10882	10882		36.447	6.129	1	328100	+		56892	24710	38040	38055	64338	64338					0.040040503667114535
TEGSFEGH	8	Unmodified	_TEGSFEGH_					0	0	0		nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ENSG00000103994|ENST00000564754|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.30450439453125	2	432.180132	862.345711	0.44173	0.00019091	-1.4741	-0.00063707	-1.0323	-0.00044616	432.17903400834706	66.938	0.082939	67.323	67.269	67.352	0.38515					4	2	2	0	0	0	0.4196	1	7314	7314		31.955	0	1	29191			56893	2108	38041	38056	64339	64339					-0.09096803855459257
TEGSVRPTG	9	Unmodified	_TEGSVRPTG_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	452.9483337402344	2	452.230156	902.445759	-1.2051	-0.00054496	-3.175	-0.0014358	-4.38	-0.0019808	452.22860546718204	106.99	0.87726	107.13	106.81	107.69	0.13866					55	21	3	0	0	0	0.20789	1	11475	11475		54.776	10.66	1	1438000	+		56894	23565	38042	38057	64340	64340					-0.009365665216478192
TEIDGRSISL	10	Unmodified	_TEIDGRSISL_					0	0	0		ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF;ENST00000494618.1_1_2:232322276-232325237:-|nuORF	ENSG00000115053|ENST00000322723|NCL	ENSG00000115053|ENST00000322723|NCL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.7909545898438	2	545.790578	1089.5666	-1.2147	-0.00066297	1.3124	0.00071627	0.097654	5.3298E-05	545.7909942690995	56.78	0.6445	57.177	56.853	57.498	0.39672					37	14	4	0	0	0	0.22362	2	5888	5866;5888		81.525	5.5399	1	1132600			56895	2809	38043	38058	64341;64342	64342					0.025402164011666173
TEIDGRSISL	10	Unmodified	_TEIDGRSISL_					0	0	0		ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF;ENST00000494618.1_1_2:232322276-232325237:-|nuORF	ENSG00000115053|ENST00000322723|NCL	ENSG00000115053|ENST00000322723|NCL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.7922973632812	2	545.790578	1089.5666	0.29927	0.00016334	-0.056464	-3.0817E-05	0.2428	0.00013252	545.7903436571286	56.644	0.98027	57.204	56.832	57.812	0.55954					46	22	4	0	0	0	0.062895	2	5876	5864;5876		106.88	21.719	1	1213700			56896	2809	38043	38058	64343;64344	64344					0.025402164011666173
TEIEGTQKL	9	Unmodified	_TEIEGTQKL_					0	0	0		nc|ENSG00000120899|Q14289-2|PTK2B;ENSG00000120899|ENST00000346049|PTK2B	nc|ENSG00000120899|Q14289-2|PTK2B	nc|ENSG00000120899|Q14289-2|PTK2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.773193359375	2	509.774396	1017.53424	-0.69365	-0.0003536	0.8429	0.00042969	0.14925	7.6084E-05	509.7746678128717	37.054	0.61985	37.001	36.694	37.314	-0.053558					21	13	2	0	0	0	0.24527	1	2504	2504		69.628	7.5202	1	123070			56897	3157	38044	38059	64345	64345					0.026174289981327092
TEIGKDVIGL	10	Unmodified	_TEIGKDVIGL_					0	0	0		ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	ENSG00000122218|ENST00000241704|COPA	ENSG00000122218|ENST00000241704|COPA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.800048828125	2	522.800414	1043.58628	-0.36541	-0.00019103	-0.066213	-3.4616E-05	-0.43162	-0.00022565	522.8002684990488	59.941	0.79124	60.332	59.932	60.723	0.39077					42	20	3	0	0	0	0.34329	1	6326	6326		68.846	1.3525	1	774970			56898	3214	38045	38060	64346	64346					0.06622592411895312
TEIGKDVIGL	10	Unmodified	_TEIGKDVIGL_					0	0	0		ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	ENSG00000122218|ENST00000241704|COPA	ENSG00000122218|ENST00000241704|COPA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	522.800414	1043.58628	-0.50923	-0.00026623	-0.37924	-0.00019826	-0.88847	-0.00046449	522.800305952509	59.809	0.72034	60.363	59.998	60.718	0.55323	0.015402	-0.00028508	NaN	68.846	36	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	730020			56899	3214	38045	38060							0.06622592411895312
TEIHKELI	8	Unmodified	_TEIHKELI_					0	0	0			REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	REV__nc|ENSG00000139746|Q5T8P6-3|RBM26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7806701660156	2	491.782025	981.549496	0.64958	0.00031945	-0.75272	-0.00037018	-0.10314	-5.0723E-05	491.7815186629113	50.135	0.81873	50.98	50.641	51.46	0.84501					43	19	3	0	0	0	0.79403	1	4936	4936		63.306	5.495	1	1893000	+		56900	19568	38046	38061	64347	64347					0.05798340585999995
TEIINRLKKP	10	Unmodified	_TEIINRLKKP_					0	0	0		ENSG00000101890.5,GUCY2F,chrX,-,I13.1,109392104,109392891|12|49.19|2|intron	ENSG00000101890.5,GUCY2F,chrX,-,I13.1,109392104,109392891|12|49.19|2|intron	ENSG00000101890.5,GUCY2F,chrX,-,I13.1,109392104,109392891|12|49.19|2|intron	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.58880615234375	3	404.587195	1210.73976	1.2344	0.00049943	2.6563	0.0010747	3.8907	0.0015741	404.5881712722995	41.372	1.4334	41.378	40.604	42.037	0.0065727					70	37	2	0	0	0	0.85086	2	3044	3021;3044		25.126	3.3456	1	244970			56901	1966	38047	38062	64348;64349	64349					0.14281627248237783
TEIINRLKKP	10	Unmodified	_TEIINRLKKP_					0	0	0		ENSG00000101890.5,GUCY2F,chrX,-,I13.1,109392104,109392891|12|49.19|2|intron	ENSG00000101890.5,GUCY2F,chrX,-,I13.1,109392104,109392891|12|49.19|2|intron	ENSG00000101890.5,GUCY2F,chrX,-,I13.1,109392104,109392891|12|49.19|2|intron	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.5865783691406	3	404.587195	1210.73976	-0.70688	-0.000286	3.8208	0.0015458	3.1139	0.0012598	404.5885895770404	40.363	0.86463	40.755	40.337	41.202	0.39209					67	23	4	0	0	0	0.85086	1	3449	3449		19.263	2.5453	1	1603300			56902	1966	38047	38062	64350	64350					0.14281627248237783
TEIKISKG	8	Unmodified	_TEIKISKG_					0	0	0		ENST00000425690.7_1_19:45165089-45165437:+|nuORF	ENST00000425690.7_1_19:45165089-45165437:+|nuORF	ENST00000425690.7_1_19:45165089-45165437:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2633361816406	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.92394	1	2568	2568		47.657	5.2612	1	3673500			56903	11537	38048	38063	64351	64351					0.07010669040232642
TEIKISKG	8	Unmodified	_TEIKISKG_					0	0	0		ENST00000425690.7_1_19:45165089-45165437:+|nuORF	ENST00000425690.7_1_19:45165089-45165437:+|nuORF	ENST00000425690.7_1_19:45165089-45165437:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26287841796875	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.88601	1	3201	3201		34.173	3.6689	1	5350400			56904	11537	38048	38063	64352	64352					0.07010669040232642
TEIKISKG	8	Unmodified	_TEIKISKG_					0	0	0		ENST00000425690.7_1_19:45165089-45165437:+|nuORF	ENST00000425690.7_1_19:45165089-45165437:+|nuORF	ENST00000425690.7_1_19:45165089-45165437:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2630310058594	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.86677	1	2763	2763		27.882	1.0861	1	22924000			56905	11537	38048	38063	64353	64353					0.07010669040232642
TEIKISKG	8	Unmodified	_TEIKISKG_					0	0	0		ENST00000425690.7_1_19:45165089-45165437:+|nuORF	ENST00000425690.7_1_19:45165089-45165437:+|nuORF	ENST00000425690.7_1_19:45165089-45165437:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2628479003906	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.86677	1	2640	2640		27.882	2.3082	1	22029000			56906	11537	38048	38063	64354	64354					0.07010669040232642
TEIKISKG	8	Unmodified	_TEIKISKG_					0	0	0		ENST00000425690.7_1_19:45165089-45165437:+|nuORF	ENST00000425690.7_1_19:45165089-45165437:+|nuORF	ENST00000425690.7_1_19:45165089-45165437:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2627868652344	2	438.263468	874.512382	-1.2747	-0.00055866	-0.66852	-0.00029299	-1.9432	-0.00085165	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.90089	1	3721	3721		39.253	2.0937	1	219150000			56907	11537	38048	38063	64355	64355					0.07010669040232642
TEILSLNNL	9	Unmodified	_TEILSLNNL_					0	0	0		ENSG00000145863|ENST00000274545|GABRA6	ENSG00000145863|ENST00000274545|GABRA6	ENSG00000145863|ENST00000274545|GABRA6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.7825927734375	2	508.784764	1015.55498	-1.0195	-0.00051871	-0.29829	-0.00015177	-1.3178	-0.00067048	508.78449272511665	42.17	0.76888	42.868	42.571	43.339	0.69754					39	18	3	0	0	0	0.096131	1	3760	3760		93.195	18.94	1	1429200			56908	4799	38049	38064	64356	64356					0.04782019377796587
TEINVVRGFH	10	Unmodified	_TEINVVRGFH_					0	0	0			REV__ENSG00000054690|ENST00000329153|PLEKHH1	REV__ENSG00000054690|ENST00000329153|PLEKHH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.3134765625	2	586.314554	1170.61456	-0.85676	-0.00050233	-0.68113	-0.00039936	-1.5379	-0.00090169	586.3144173087796	85.346	0.89909	85.785	85.464	86.363	0.43967					39	21	2	0	0	0	0.37206	1	9977	9977		66.429	0.6261	1	1035900	+		56909	16405	38050	38065	64357	64357					0.03607335111860266
TEIPLIKI	8	Unmodified	_TEIPLIKI_					0	0	0		nc|ENSG00000155719|Q7RTW8-3|OTOA;ENST00000563506.1_1_16:21742071-21771858:+|nuORF;nc|ENSG00000155719|Q7RTW8-2|OTOA;nc|ENSG00000155719|Q7RTW8-4|OTOA;ENSG00000155719|ENST00000646100|OTOA;nc|ENSG00000155719|Q7RTW8|OTOA	nc|ENSG00000155719|Q7RTW8-3|OTOA	nc|ENSG00000155719|Q7RTW8-3|OTOA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.80010986328125	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.79929	1	3727	3727		18.324	0	1	251610			56910	5337	38051	38066	64358	64358					0.11905003113804469
TEIRQPIRN	9	Unmodified	_TEIRQPIRN_					0	0	0			REV__ENST00000533658.5_1_11:16588910-16627498:-|nuORF	REV__ENST00000533658.5_1_11:16588910-16627498:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	563.816650390625	2	563.820004	1125.62546	-1.2457	-0.00070233	-1.7556	-0.00098984	-3.0013	-0.0016922	563.8178367580804	55.254	0.89718	55.246	54.942	55.839	-0.0077095					38	23	2	0	0	0	0.7932	1	4965	4965		25.574	1.0549	1	71105	+		56911	28353	38052	38067	64359	64359					0.0676673748612302
TEITHAVVI	9	Unmodified	_TEITHAVVI_					0	0	0		nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF	nc|ENSG00000184110|Q99613-2|EIF3C	nc|ENSG00000184110|Q99613-2|EIF3C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7805480957031	2	491.782025	981.549496	0.64958	0.00031945	-0.75272	-0.00037018	-0.10314	-5.0723E-05	491.7815186629113	50.135	0.81873	50.98	50.641	51.46	0.84501					43	19	3	0	0	0	0.31972	1	4922	4922		63.306	7.8021	1	1893000			56912	7581	38053	38068	64360	64360					0.057983405859772574
TEIVKRKTT	9	Unmodified	_TEIVKRKTT_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3272705078125	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12786	12786		25.574	0.12388	1	4041000	+		56913	20542	38054	38069	64361	64361					0.10537389914406958
TEKCYGNR	8	Unmodified	_TEKCYGNR_					0	0	0			REV__nc|ENSG00000114805|Q4KWH8|PLCH1	REV__nc|ENSG00000114805|Q4KWH8|PLCH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.2678527832031	2	485.724184	969.433814	0.61681	0.0002996	3.8554	0.0018727	4.4722	0.0021723	485.7259755180699	88.225	1.6761	88.674	87.893	89.569	0.44892					60	40	2	0	0	0	0.4196	1	10276	10276		8.2313	0	1	189600	+		56914	29793	38055	38070	64362	64362					-0.05212506536497585
TEKMYRIK	8	Unmodified	_TEKMYRIK_					0	0	0			REV__ENSG00000173572|ENST00000342929|NLRP13	REV__ENSG00000173572|ENST00000342929|NLRP13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	534.795654296875	2	534.797152	1067.57975	-0.052811	-2.8243E-05	-3.3488	-0.001791	-3.4017	-0.0018192	534.7953394938359	58.03	0.8242	58.016	57.676	58.5	-0.013638					56	27	3	0	0	0	0.91472	1	5285	5285		44.117	4.864	1	226440	+		56915	21932	38056	38071	64363	64363					0.048663759795317674
TEKTLLKKCLC	11	Unmodified	_TEKTLLKKCLC_					0	0	0			REV__nc|ENSG00000162929|Q6NSI8-4|SANBR	REV__nc|ENSG00000162929|Q6NSI8-4|SANBR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3587036132812	2	640.359259	1278.70396	-1.1585	-0.00074183	0.46685	0.00029895	-0.69161	-0.00044288	640.3594398218631	99.341	2.5092	99.527	98.68	101.19	0.18581					187	58	4	0	0	0	0.72106	1	10293	10293		28.081	2.5074	1	585260	+		56916	20865	38057	38072	64364	64364					0.07576085684740974
TEKVMTYF	8	Unmodified	_TEKVMTYF_					0	0	0			REV__ENSG00000078589|ENST00000171757|P2RY10	REV__ENSG00000078589|ENST00000171757|P2RY10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.751708984375	2	509.749336	1017.48412	-0.72541	-0.00036978	3.8077	0.001941	3.0823	0.0015712	509.75104021431855	45.601	0.68941	45.596	45.23	45.92	-0.0041618					27	15	2	0	0	0	0.93786	1	3623	3623		53.351	2.1588	1	312100	+		56917	16765	38058	38073	64365	64365					-0.02392396931361418
TEKVMTYF	8	Unmodified	_TEKVMTYF_					0	0	0			REV__ENSG00000078589|ENST00000171757|P2RY10	REV__ENSG00000078589|ENST00000171757|P2RY10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.7503356933594	2	509.749336	1017.48412	-0.45557	-0.00023223	3.7826	0.0019282	3.327	0.001696	509.7511381869462	45.568	0.80136	45.58	45.28	46.081	0.012058					37	21	2	0	0	0	0.72312	1	3271	3271		66.429	8.183	1	640980	+		56918	16765	38058	38073	64366	64366					-0.02392396931361418
TELAFPAVTL	10	Unmodified	_TELAFPAVTL_					0	0	0		nc|ENSG00000110881|P78348-3|ASIC1	nc|ENSG00000110881|P78348-3|ASIC1	nc|ENSG00000110881|P78348-3|ASIC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2759399414062	2	531.297507	1060.58046	0.71485	0.0003798	-4.4459	-0.0023621	-3.731	-0.0019823	531.2950185844658	49.999	0.62039	50.446	50.225	50.845	0.4476					32	14	3	0	0	0	0.37624	1	4927	4927		58.782	11.125	1	814250			56919	14843	38059	38074	64367	64367					0.05259493900234702
TELAVLEQ	8	Unmodified	_TELAVLEQ_					0	0	0		ENSG00000183798|ENST00000332312|EMILIN3;nc|ENSG00000183798|Q9NT22-2|EMILIN3	ENSG00000183798|ENST00000332312|EMILIN3	ENSG00000183798|ENST00000332312|EMILIN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.7458190917969	2	451.745108	901.475663	-1.3354	-0.00060327	3.1446	0.0014206	1.8092	0.00081728	451.74648679752744	34.552	0.77399	34.59	34.166	34.94	0.038643					54	31	2	0	0	0	0.90465	1	1738	1738		40.573	0	1	190450			56920	7563	38060	38075	64368	64368					0.020983724236771195
TELAVTLKVC	10	Unmodified	_TELAVTLKVC_					0	0	0			REV__ENSG00000178971|ENST00000651323|CTC1	REV__ENSG00000178971|ENST00000651323|CTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.8076171875	2	538.804642	1075.59473	1.2439	0.00067023	2.5512	0.0013746	3.7951	0.0020448	538.8059653540298	90.569	3.7366	90.615	89.222	92.959	0.046448					245	88	4	0	0	0	0.86763	1	9489	9489		26.693	1.1189	1	805100	+		56921	22304	38061	38076	64369	64369					0.0599582305687818
TELCFGSH	8	Unmodified	_TELCFGSH_					0	0	0			REV__ENSG00000143891|ENST00000272252|GALM	REV__ENSG00000143891|ENST00000272252|GALM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.185791015625	2	447.194728	892.374903	0.94179	0.00042116	-0.68133	-0.00030469	0.26046	0.00011648	447.19551023940744	99.526	0.36591	99.859	99.61	99.976	0.33295					12	8	2	0	0	0	0.4196	1	11990	11990		12.207	0	1	46857	+		56922	19853	38062	38077	64370	64370					-0.07558982830835248
TELDLIKIQ	9	Unmodified	_TELDLIKIQ_					0	0	0			REV__nc|ENSG00000122417|Q9ULJ1-5|ODF2L	REV__nc|ENSG00000122417|Q9ULJ1-5|ODF2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.8136596679688	2	536.816064	1071.61758	-0.95733	-0.00051391	-2.4814	-0.0013321	-3.4387	-0.001846	536.8145477540568	60.919	1.1415	61.308	60.605	61.746	0.38945					62	34	3	0	0	0	0.67345	1	6484	6484		42.396	0	1	4106400	+		56923	18495	38063	38078	64371	64371					0.08463165446005405
TELHLPLLWS	10	Unmodified	_TELHLPLLWS_					0	0	0		ENST00000263981.9_1_4:153273802-153273886:-|nuORF	ENST00000263981.9_1_4:153273802-153273886:-|nuORF	ENST00000263981.9_1_4:153273802-153273886:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.559326171875	3	403.560646	1207.66011	-0.38238	-0.00015431	-1.1469	-0.00046286	-1.5293	-0.00061717	403.56005878614496	22.792	0.9348	22.733	22.419	23.353	-0.058668					76	31	3	0	0	0	0.86338	1	790	790		31.634	0	1	169720			56924	9471	38064	38079	64372	64372					0.06458560574242256
TELIIEKH	8	Unmodified	_TELIIEKH_					0	0	0			REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1	REV__nc|ENSG00000029534|P16157-14|ANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7801818847656	2	491.782025	981.549496	-0.022146	-1.0891E-05	0.37508	0.00018446	0.35293	0.00017357	491.7819409897417	50.275	0.86578	50.723	50.307	51.173	0.44761					50	20	4	0	0	0	0.93786	1	4939	4939		53.351	0	1	1878200	+		56925	29680;29681	38065	38080	64373	64373					0.05798340585988626
TELKLLLP	8	Unmodified	_TELKLLLP_					0	0	0			REV__ENSG00000132952|ENST00000255304|USPL1	REV__ENSG00000132952|ENST00000255304|USPL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.79962158203125	2	463.799686	925.584819	-1.1413	-0.00052933	2.885	0.001338	1.7437	0.00080871	463.8009223906452	41.714	1.3576	41.718	41.166	42.524	0.0043983					77	36	3	0	0	0	0.83058	1	2806	2806		12.959	0	1	388800	+		56926	19046	38066	38081	64374	64374					0.11905003113804469
TELLEADL	8	Unmodified	_TELLEADL_					0	0	0		nc|ENSG00000172262|P52739-2|ZNF131;ENSG00000172262|ENST00000682664|ZNF131	nc|ENSG00000172262|P52739-2|ZNF131	nc|ENSG00000172262|P52739-2|ZNF131	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9430236816406	2	452.237116	902.459678	0.34804	0.0001574	2.5819	0.0011676	2.93	0.001325	452.2381403556462	55.612	0.80912	55.711	55.123	55.932	0.099186					42	24	2	0	0	0	0.4196	1	4617	4617		6.3127	0	1	129950			56927	6757	38067	38082	64375	64375					0.00454666186749364
TELLKKQKAKH	11	Unmodified	_TELLKKQKAKH_					0	0	0		nc|ENSG00000164089|Q8TBG4-3|ETNPPL;nc|ENSG00000164089|Q8TBG4-2|ETNPPL;ENSG00000164089|ENST00000296486|ETNPPL	nc|ENSG00000164089|Q8TBG4-3|ETNPPL	nc|ENSG00000164089|Q8TBG4-3|ETNPPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.9383850097656	3	441.94175	1322.80342	-0.1083	-4.7863E-05	-4.2447	-0.0018759	-4.353	-0.0019238	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.75457	1	4879	4879		21.032	1.0018	1	447080			56928	5915	38068	38083	64376	64376					0.15492987685320259
TELMQTLGSY	10	Unmodified	_TELMQTLGSY_					0	0	0		ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;ENST00000367112.1_2_6:158500311-158517393:+|nuORF;nc|ENSG00000078269|O15056-3|SYNJ2;chr6:158093104-158093888|18|12.06|0.72|4.06|+|ENST00000640338|SYNJ2,SYNJ2	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.769775390625	2	571.773539	1141.53253	0.3835	0.00021928	-3.2803	-0.0018756	-2.8968	-0.0016563	571.7714375998894	81.279	0.61361	81.778	81.419	82.033	0.49966					22	14	2	0	0	0	0.63899	1	9404	9404		47.96	8.7067	1	301000			56929	1394;471	38069	38084	64377	64377					-0.032579480820913886
TELMQTLGSY	10	Unmodified	_TELMQTLGSY_					0	0	0		ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;ENST00000367112.1_2_6:158500311-158517393:+|nuORF;nc|ENSG00000078269|O15056-3|SYNJ2;chr6:158093104-158093888|18|12.06|0.72|4.06|+|ENST00000640338|SYNJ2,SYNJ2	ENSG00000078269|ENST00000355585|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	571.773539	1141.53253	-0.45313	-0.00025909	-2.2492	-0.0012861	-2.7024	-0.0015452	571.7719719708372	81.359	0.56708	81.78	81.43	81.997	0.42149	0.0010608	0.00043864	NaN	47.96	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	300480			56930	1394;471	38069	38084							-0.032579480820913886
TELPRLAEF	9	Unmodified	_TELPRLAEF_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3006591796875	2	538.292756	1074.57096	2.315	0.0012461	1.4571	0.00078434	3.772	0.0020305	538.2933770208962	102.11	0.81071	102.41	102.09	102.9	0.29865					52	18	4	0	0	0	0.69624	1	12421	12421		40.778	0	1	2358600	+		56931	23196	38070	38085	64378	64378					0.03665725614700932
TELPSLLLP	9	Unmodified	_TELPSLLLP_					0	0	0		nc|ENSG00000100918|O95072-2|REC8;ENSG00000100918|ENST00000611366|REC8	nc|ENSG00000100918|O95072-2|REC8	nc|ENSG00000100918|O95072-2|REC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7956848144531	2	491.794601	981.574648	-0.36021	-0.00017715	2.6619	0.0013091	2.3017	0.001132	491.79587618632917	55.368	1.5692	55.341	54.702	56.271	-0.027279					123	47	4	0	0	0	0.74721	1	4987	4987		37.159	5.2042	1	1374900			56932	1884	38071	38086	64379	64379					0.08312395388577443
TELPSLLLP	9	Unmodified	_TELPSLLLP_					0	0	0		nc|ENSG00000100918|O95072-2|REC8;ENSG00000100918|ENST00000611366|REC8	nc|ENSG00000100918|O95072-2|REC8	nc|ENSG00000100918|O95072-2|REC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79534912109375	2	491.794601	981.574648	-0.71316	-0.00035073	3.1449	0.0015467	2.4318	0.0011959	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.7932	1	3775	3775		25.45	2.4077	1	1219600			56933	1884	38071	38086	64380	64380					0.08312395388577443
TELPSLLLP	9	Unmodified	_TELPSLLLP_					0	0	0		nc|ENSG00000100918|O95072-2|REC8;ENSG00000100918|ENST00000611366|REC8	nc|ENSG00000100918|O95072-2|REC8	nc|ENSG00000100918|O95072-2|REC8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79583740234375	2	491.794601	981.574648	-0.16137	-7.9361E-05	2.6017	0.0012795	2.4403	0.0012001	491.795730554191	52.394	1.7298	53.062	52.517	54.247	0.6673					112	41	4	0	0	0	0.7932	1	5259	5259		25.45	3.7478	1	2437000			56934	1884	38071	38086	64381	64381					0.08312395388577443
TELRPLKGY	9	Unmodified	_TELRPLKGY_					0	0	0			REV__nc|nan|Q6ZRI6-2|C15orf39	REV__nc|nan|Q6ZRI6-2|C15orf39	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.8068237304688	2	538.808574	1075.60259	-0.69163	-0.00037266	-2.7906	-0.0015036	-3.4823	-0.0018763	538.8070299475025	90.865	3.8094	90.865	89.559	93.368	0					216	88	3	0	0	0	0.76255	1	8836	8836		35.618	3.6634	1	563820	+		56935	21362	38072	38087	64382	64382					0.06781718368665679
TELRSVADSI	10	Unmodified	_TELRSVADSI_					0	0	0			REV__nc|ENSG00000144674|Q13439-3|GOLGA4	REV__nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.7906494140625	2	545.790578	1089.5666	-1.2147	-0.00066297	1.3124	0.00071627	0.097654	5.3298E-05	545.7909942690995	56.78	0.6445	57.177	56.853	57.498	0.39672					37	14	4	0	0	0	0.2575	1	5876	5876		77.318	5.0743	1	1132600	+		56936	19907	38073	38088	64383	64383					0.0254021640114388
TELSLRPLLVA	11	Unmodified	_TELSLRPLLVA_					0	0	0			REV__ENSG00000266714|ENST00000645453|MYO15B	REV__ENSG00000266714|ENST00000645453|MYO15B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.3692626953125	2	606.371538	1210.72852	-0.02762	-1.6748E-05	-3.2759	-0.0019864	-3.3035	-0.0020032	606.3694476526515	94.093	3.5324	94.139	93.078	96.61	0.045456					200	83	3	0	0	0	0.76322	1	9968	9968		19.104	0	1	863170	+		56937	23964	38074	38089	64384	64384					0.13158805154080255
TELVCRAYGE	10	Unmodified	_TELVCRAYGE_					0	0	0		ENSG00000133103|ENST00000455146|COG6	ENSG00000133103|ENST00000455146|COG6	ENSG00000133103|ENST00000455146|COG6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.76953125	2	570.771331	1139.52811	-1.0878	-0.0006209	0.57924	0.00033061	-0.5086	-0.00029029	570.7715868891898	56.291	0.56245	56.28	55.771	56.334	-0.010136					29	19	2	0	0	0	0.80179	1	5031	5031		39.253	7.298	1	395810			56938	3854	38075	38090	64385	64385					-0.036074125050163275
TENDIRVMF	9	Oxidation (M)	_TENDIRVM(Oxidation (M))F_		TENDIRVM(1)F		TENDIRVM(53)F	0	0	1		ENST00000422993.2_1_11:47504376-47508350:-|nuORF;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;ENSG00000149187|ENST00000687097|CELF1	ENST00000422993.2_1_11:47504376-47508350:-|nuORF	ENST00000422993.2_1_11:47504376-47508350:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.2737426757812	2	570.771331	1139.52811	-1.1215	-0.00064012	0.73129	0.0004174	-0.39021	-0.00022272	571.2731771324486	59.343	1.7285	59.329	58.466	60.195	-0.013733					93	51	2	0	0	0	0.48102	1	5418	5418		52.937	15.125	1	112100			56939	5004	38076	38091	64386	64386		88			-0.036074125050163275
TENDIRVMF	9	Oxidation (M)	_TENDIRVM(Oxidation (M))F_		TENDIRVM(1)F		TENDIRVM(41)F	0	0	1		ENST00000422993.2_1_11:47504376-47508350:-|nuORF;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;ENSG00000149187|ENST00000687097|CELF1	ENST00000422993.2_1_11:47504376-47508350:-|nuORF	ENST00000422993.2_1_11:47504376-47508350:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.2755737304688	2	570.771331	1139.52811	0.19004	0.00010847	-0.61197	-0.0003493	-0.42193	-0.00024082	571.2723702822065	59.28	1.9344	59.249	58.133	60.067	-0.030888					98	54	2	0	0	0	0.68711	1	5520	5520		41.427	8.6142	1	117780			56940	5004	38076	38091	64387	64387		88			-0.036074125050163275
TENDIRVMF	9	Unmodified	_TENDIRVMF_					0	0	0		ENST00000422993.2_1_11:47504376-47508350:-|nuORF;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;ENSG00000149187|ENST00000687097|CELF1	ENST00000422993.2_1_11:47504376-47508350:-|nuORF	ENST00000422993.2_1_11:47504376-47508350:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.7738037109375	2	562.773874	1123.53319	-1.2635	-0.00071106	0.7653	0.00043069	-0.49819	-0.00028037	562.7744138634677	63.921	0.64169	63.92	63.699	64.341	-0.00078583					40	22	2	0	0	0	0.33718	1	5953	5953		62.107	15.651	1	190150			56941	5004	38076	38092	64388	64388					-0.02363108642384759
TENDIRVMF	9	Unmodified	_TENDIRVMF_					0	0	0		ENST00000422993.2_1_11:47504376-47508350:-|nuORF;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;ENSG00000149187|ENST00000687097|CELF1	ENST00000422993.2_1_11:47504376-47508350:-|nuORF	ENST00000422993.2_1_11:47504376-47508350:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	562.7733764648438	2	562.773874	1123.53319	0.1168	6.573E-05	-0.021686	-1.2204E-05	0.095111	5.3526E-05	562.7737807030672	63.866	0.63213	63.831	63.511	64.143	-0.034256					41	19	3	0	0	0	0.33718	2	6066	6066;6082		62.107	24.296	1	236840			56942	5004	38076	38092	64389;64390	64389					-0.02363108642384759
TENDIRVMF	9	Unmodified	_TENDIRVMF_					0	0	0		ENST00000422993.2_1_11:47504376-47508350:-|nuORF;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;ENSG00000149187|ENST00000687097|CELF1	ENST00000422993.2_1_11:47504376-47508350:-|nuORF	ENST00000422993.2_1_11:47504376-47508350:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.77294921875	2	562.773874	1123.53319	-0.19802	-0.00011144	0.052688	2.9652E-05	-0.14533	-8.1788E-05	562.7739414193032	63.701	0.66625	63.728	63.476	64.143	0.027138					44	21	3	0	0	0	0.39367	2	5983	5983;5992		58.23	10.923	1	199620			56943	5004	38076	38092	64391;64392	64391					-0.02363108642384759
TENDIYNFF	9	Unmodified	_TENDIYNFF_					0	0	0		ENSG00000126945|ENST00000316594|HNRNPH2;ENST00000515481.5_1_5:179044503-179045371:-|nuORF;ENST00000502904.5_1_5:179043989-179045371:-|nuORF;ENSG00000169045|ENST00000393432|HNRNPH1;ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000126945|ENST00000316594|HNRNPH2;ENSG00000169045|ENST00000393432|HNRNPH1;ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.7562255859375	2	581.756204	1161.49785	-0.85785	-0.00049906	0.86519	0.00050333	0.007338	4.2689E-06	581.7565755155856	90.071	0.94716	90.14	89.775	90.722	0.068703					52	21	3	0	0	0	0.12688	2	9211	9211;9223		87.696	26.724	1	864530			56944	6525;6463;3480	38077	38093	64393;64394	64393					-0.07643447898567501
TENDIYNFF	9	Unmodified	_TENDIYNFF_					0	0	0		ENSG00000126945|ENST00000316594|HNRNPH2;ENST00000515481.5_1_5:179044503-179045371:-|nuORF;ENST00000502904.5_1_5:179043989-179045371:-|nuORF;ENSG00000169045|ENST00000393432|HNRNPH1;ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000126945|ENST00000316594|HNRNPH2;ENSG00000169045|ENST00000393432|HNRNPH1;ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.755859375	2	581.756204	1161.49785	1.7839	0.0010378	-1.8347	-0.0010673	-0.05075	-2.9524E-05	581.7549354706031	90.202	0.89809	90.132	89.742	90.64	-0.069969					52	20	3	0	0	0	0.21969	1	9452	9452		71.877	6.0743	1	770980			56945	6525;6463;3480	38077	38093	64395	64395					-0.07643447898567501
TENDIYNFF	9	Unmodified	_TENDIYNFF_					0	0	0		ENSG00000126945|ENST00000316594|HNRNPH2;ENST00000515481.5_1_5:179044503-179045371:-|nuORF;ENST00000502904.5_1_5:179043989-179045371:-|nuORF;ENSG00000169045|ENST00000393432|HNRNPH1;ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000126945|ENST00000316594|HNRNPH2;ENSG00000169045|ENST00000393432|HNRNPH1;ENSG00000169813|ENST00000682386|HNRNPF	ENSG00000169813|ENST00000682386|HNRNPF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.7559814453125	2	581.756204	1161.49785	0.23462	0.00013649	-0.12025	-6.9958E-05	0.11436	6.6532E-05	581.7559098672469	89.933	0.81758	89.981	89.658	90.476	0.048157					48	18	3	0	0	0	0.034797	1	9296	9296		115.49	9.0788	1	768050			56946	6525;6463;3480	38077	38093	64396	64396					-0.07643447898567501
TENFNIKQM	9	Oxidation (M)	_TENFNIKQM(Oxidation (M))_		TENFNIKQM(1)		TENFNIKQM(66)	0	0	1		ENSG00000102189|ENST00000322349|EEA1	ENSG00000102189|ENST00000322349|EEA1	ENSG00000102189|ENST00000322349|EEA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	570.7695922851562	2	570.771331	1139.52811	-1.1215	-0.00064012	0.73129	0.0004174	-0.39021	-0.00022272	571.2731771324486	59.343	1.7285	59.329	58.466	60.195	-0.013733					93	51	2	0	0	0	0.28163	1	5436	5436		66.429	7.6473	1	112100			56947	1994	38078	38094	64397	64397		41			-0.036074125050163275
TENIEKLRT	9	Unmodified	_TENIEKLRT_					0	0	0		ENSG00000142621|ENST00000688493|FHAD1;nc|ENSG00000142621|B1AJZ9-4|FHAD1;nc|ENSG00000142621|B1AJZ9|FHAD1;nc|ENSG00000142621|B1AJZ9-3|FHAD1;ENST00000472131.5_1_1:15653545-15656069:+|nuORF;ENST00000459961.1_1_1:15653545-15655159:+|nuORF;ENST00000471347.5_1_1:15654853-15671627:+|nuORF	ENSG00000142621|ENST00000688493|FHAD1	ENSG00000142621|ENST00000688493|FHAD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3058471679688	2	552.306395	1102.59824	-0.70613	-0.00039	0.73262	0.00040463	0.026487	1.4629E-05	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.64555	1	9685	9685		44.377	0	1	1609500			56948	4576	38079	38095	64398	64398					0.05104209155092576
TENNDHINL	9	Unmodified	_TENNDHINL_					0	0	0		ENSG00000188612|ENST00000420826|SUMO2;nc|ENSG00000188612|P61956-2|SUMO2	ENSG00000188612|ENST00000420826|SUMO2	ENSG00000188612|ENST00000420826|SUMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2494506835938	2	535.249077	1068.4836	0.06302	3.3731E-05	0.051067	2.7334E-05	0.11409	6.1065E-05	535.2489921169747	37.816	1.2881	38.129	37.621	38.909	0.31312					91	32	4	0	0	0	2.5939E-13	5	3069	3034;3045;3057;3069;3081		167.23	74.033	1	2308900			56949	7942	38080	38096	64399;64400;64401;64402;64403	64402					-0.04790100326863467
TENNDHINL	9	Unmodified	_TENNDHINL_					0	0	0		ENSG00000188612|ENST00000420826|SUMO2;nc|ENSG00000188612|P61956-2|SUMO2	ENSG00000188612|ENST00000420826|SUMO2	ENSG00000188612|ENST00000420826|SUMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2495727539062	2	535.249077	1068.4836	-0.083784	-4.4845E-05	0.086543	4.6322E-05	0.0027589	1.4767E-06	535.2490302276585	37.705	1.4219	38.191	37.704	39.126	0.48581					86	35	4	0	0	0	2.4207E-08	5	3088	3035;3050;3063;3075;3088		158.07	62.069	1	2310800			56950	7942	38080	38096	64404;64405;64406;64407;64408	64408					-0.04790100326863467
TENTSPLN	8	Unmodified	_TENTSPLN_					0	0	0		nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA;ENSG00000174197|ENST00000703841|MGA	nc|ENSG00000174197|Q8IWI9-3|MGA	nc|ENSG00000174197|Q8IWI9-3|MGA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2634582519531	2	438.208889	874.403226	1.5471	0.00067795	2.2028	0.00096529	3.7499	0.0016432	438.21047796278833	35.057	0.4226	35.438	35.288	35.71	0.3812					16	10	2	0	0	0	0.4196	1	2665	2665		31.53	7.0106	1	119950			56951	6914	38081	38097	64409	64409					-0.038999616498927026
TENVLRIFL	9	Unmodified	_TENVLRIFL_					0	0	0		ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.82421875	2	552.824224	1103.63389	-1.0859	-0.00060033	1.3549	0.00074901	0.26894	0.00014868	552.8247634918083	77.88	0.86649	77.972	77.698	78.564	0.091438					80	32	4	0	0	0	0.55097	1	7302	7302		49.442	1.7842	1	542910			56952	1054	38082	38098	64410	64410					0.08622291402753035
TEPDAMVPTQL	11	Unmodified	_TEPDAMVPTQL_					0	0	0			REV__ENSG00000051009|ENST00000449352|FHIP1B	REV__ENSG00000051009|ENST00000449352|FHIP1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	601.2933349609375	2	601.292096	1200.56964	-0.17354	-0.00010435	3.3799	0.0020323	3.2063	0.001928	601.2935997377257	78.245	0.71089	78.808	78.537	79.248	0.56332					36	16	3	0	0	0	0.41445	1	8965	8965		58.246	9.6447	1	568860	+		56953	16380	38083	38099	64411	64411					-0.02262276536362151
TEPEGEPESIQ	11	Unmodified	_TEPEGEPESIQ_					0	0	0			REV__nc|ENSG00000196218|P21817-3|RYR1	REV__nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.2730102539062	2	608.272415	1214.53028	-1.3557	-0.00082464	1.4167	0.00086172	0.060948	3.7073E-05	608.273212366521	66.999	0.61171	67.027	66.721	67.332	0.02858					64	29	3	0	0	0	0.55601	1	6346	6346		47.96	0.30219	1	210580	+		56954	23105	38084	38100	64412	64412					-0.06840705286231241
TEPILIPV	8	Unmodified	_TEPILIPV_					0	0	0			REV__ENSG00000198597|ENST00000355537|ZNF536	REV__ENSG00000198597|ENST00000355537|ZNF536	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.24884033203125	2	441.270761	880.52697	-1.1887	-0.00052453	4.3173	0.0019051	3.1286	0.0013806	441.2732445304862	48.513	0.6007	48.982	48.788	49.389	0.46941					28	14	3	0	0	0	0.4196	1	4735	4735		14.664	5.8418	1	202300	+		56955	23343	38085	38101	64413	64413					0.08192741188383934
TEPLFDYDL	9	Unmodified	_TEPLFDYDL_					0	0	0			REV__ENSG00000110876|ENST00000550948|SELPLG	REV__ENSG00000110876|ENST00000550948|SELPLG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	557.2501831054688	2	556.760955	1111.50736	0.75554	0.00042066	0.068928	3.8376E-05	0.82447	0.00045903	556.760862300058	33.681	0.54077	33.851	33.653	34.193	0.16971					19	12	2	0	0	0	0.20789	1	2489	2489		15.642	0	1	142740	+		56956	17837	38086	38102	64414	64414					-0.043936796130537914
TEPPLVTND	9	Unmodified	_TEPPLVTND_					0	0	0			REV__nc|ENSG00000166847|Q9BTE1-2|DCTN5	REV__nc|ENSG00000166847|Q9BTE1-2|DCTN5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.24700927734375	2	493.245472	984.476391	-1.1617	-0.000573	2.3043	0.0011366	1.1426	0.0005636	493.24654239461523	27.911	1.9472	27.888	27.422	29.369	-0.023556					123	54	4	0	0	0	0.55097	1	1359	1359		49.442	3.4896	1	1012800	+		56957	21330	38087	38103	64415	64415					-0.01646832927281139
TEPQDFALL	9	Unmodified	_TEPQDFALL_					0	0	0		nc|ENSG00000078177|Q86UW6-2|N4BP2;ENSG00000078177|ENST00000261435|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2633666992188	2	517.263665	1032.51278	-0.093409	-4.8317E-05	-0.89109	-0.00046093	-0.9845	-0.00050924	517.2636433970295	77.758	1.0402	78.326	77.791	78.831	0.56836					85	24	5	0	0	0	0.31972	1	8891	8891		63.306	0	1	1637200			56958	1393	38088	38104	64416	64416					-0.00217956030564892
TEPTEDSGISL	11	Unmodified	_TEPTEDSGISL_					0	0	0		nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I	nc|ENSG00000263001|P78347-2|GTF2I	nc|ENSG00000263001|P78347-2|GTF2I	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.7686767578125	2	574.769508	1147.52446	-1.3662	-0.00078526	1.1899	0.00068392	-0.17632	-0.00010134	574.770020898295	59.952	1.3296	60.343	59.891	61.221	0.39077					95	35	4	0	0	0	0.00083273	8	6329	6308;6318;6329;6341;6353;6363;6372;6383		120.87	46.513	1	3233200			56959	8936	38089	38105	64417;64418;64419;64420;64421;64422;64423;64424	64419					-0.043398037978931825
TEPTEDSGISL	11	Unmodified	_TEPTEDSGISL_					0	0	0		nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I	nc|ENSG00000263001|P78347-2|GTF2I	nc|ENSG00000263001|P78347-2|GTF2I	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.769287109375	2	574.769508	1147.52446	-0.78612	-0.00045184	0.48388	0.00027812	-0.30224	-0.00017372	574.7696176678855	59.825	1.2222	60.378	59.958	61.18	0.55323					89	32	4	0	0	0	1.7701E-05	7	6338	6307;6316;6327;6338;6351;6363;6375		139.97	54.81	1	4150300			56960	8936	38089	38105	64425;64426;64427;64428;64429;64430;64431	64428					-0.043398037978931825
TEQGDIFKITL	11	Unmodified	_TEQGDIFKITL_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	632.843017578125	2	632.84281	1263.67107	0.31568	0.00019978	-1.4196	-0.00089839	-1.1039	-0.00069862	633.3422305285967	77.395	1.5628	77.8	77.361	78.924	0.4053					74	37	4	0	0	0	0.3478	1	8818	8818		63.426	3.3082	1	515960			56961	7987	38090	38106	64432	64432					0.04977918157851491
TEQGDIFKITL	11	Unmodified	_TEQGDIFKITL_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	632.84281	1263.67107	0.98581	0.00062386	-2.1975	-0.0013907	-1.2117	-0.00076683	633.3417807186295	77.395	1.1749	77.964	77.489	78.664	0.56835	0.081769	-0.00050733	NaN	63.426	52	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	508670			56962	7987	38090	38106							0.04977918157851491
TEQPLHHFLQ	10	Unmodified	_TEQPLHHFLQ_					0	0	0			REV__ENSG00000196862|ENST00000408999|RGPD4;REV__nc|ENSG00000187627|P0DJD0|RGPD1	REV__nc|ENSG00000187627|P0DJD0|RGPD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	625.3201904296875	2	625.319837	1248.62512	-0.61694	-0.00038578	1.0323	0.00064554	0.4154	0.00025976	625.3204345211741	64.692	1.0387	64.692	64.408	65.447	0					102	48	3	0	0	0	0.4892	1	5691	5691		56.721	0.28726	1	308710	+		56963	22758;20335	38091	38107	64433	64433					0.010753177662763846
TERIVEPP	8	Unmodified	_TERIVEPP_					0	0	0		nc|ENSG00000125107|A5YKK6-4|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;ENSG00000125107|ENST00000317147|CNOT1	nc|ENSG00000125107|A5YKK6-4|CNOT1	nc|ENSG00000125107|A5YKK6-4|CNOT1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7596130371094	2	470.758549	939.502546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.009	1	32.003	31.503	32.503	-0.0061455								0	0	0	0.29497	1	1789	1789		34.173	0	1				56964	14891	38092	38108	64434	64434					0.03037481034857592
TERKREQSKK	10	Unmodified	_TERKREQSKK_					0	0	0		ENSG00000278053|ENST00000617633|DDX52	ENSG00000278053|ENST00000617633|DDX52	ENSG00000278053|ENST00000617633|DDX52	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7505187988281	3	430.580992	1288.72115	1.6296	0.00070166	3.0196	0.0013002	4.6491	0.0020018	430.5823249162526	35.387	1.0253	35.768	35.211	36.236	0.3812					38	26	2	0	0	0	0.37624	1	2781	2781		41.08	12.503	1	351760			56965	9026	38093	38109	64435	64435					0.08833465606358004
TERKTMKDL	9	Unmodified	_TERKTMKDL_					0	0	0			REV__ENST00000471979.6_1_4:20754367-20754490:+|nuORF	REV__ENST00000471979.6_1_4:20754367-20754490:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3096923828125	2	561.302798	1120.59104	2.6139	0.0014672	1.9108	0.0010726	4.5247	0.0025397	561.3036643100244	110.26	0.95476	110.32	110.14	111.09	0.054062					42	33	2	0	0	0	0.78528	1	13376	13376		29.17	0.020503	1	238570	+		56966	27249	38094	38110	64436	64436					0.03557153283009029
TERVVGPIS	9	Unmodified	_TERVVGPIS_					0	0	0		ENSG00000134760|ENST00000257192|DSG1;nc|ENSG00000134760|Q02413-2|DSG1	ENSG00000134760|ENST00000257192|DSG1	ENSG00000134760|ENST00000257192|DSG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.224853515625	2	479.271824	956.529095	-0.19034	-9.1224E-05	-1.2176	-0.00058357	-1.408	-0.0006748	479.2708221752801	32.047	0.47234	32.154	31.888	32.36	0.10707					16	10	2	0	0	0	0.20789	1	2225	2225		44.117	5.3107	1	80031			56967	3955	38095	38111	64437	64437					0.04909169926202139
TESDWIHVV	9	Unmodified	_TESDWIHVV_					0	0	0			REV__ENSG00000149499|ENST00000394773|EML3	REV__ENSG00000149499|ENST00000394773|EML3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	542.2859497070312	2	543.266739	1084.51892	0.82789	0.00044976	-1.0387	-0.0005643	-0.21083	-0.00011454	543.2657988595467	58.688	0.39185	58.657	58.471	58.863	-0.030888					21	13	2	0	0	0	0.20789	1	5448	5448		25.45	4.5032	1	84112	+		56968	20173	38096	38112	64438	64438					-0.019954377990416106
TESDWIHVV	9	Unmodified	_TESDWIHVV_					0	0	0			REV__ENSG00000149499|ENST00000394773|EML3	REV__ENSG00000149499|ENST00000394773|EML3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	543.266739	1084.51892	-0.28023	-0.00015224	-0.13263	-7.2053E-05	-0.41286	-0.00022429	543.2665306348816	58.712	0.43401	58.698	58.466	58.9	-0.013729	0.017088	0.00034592	NaN	25.45	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77607	+		56969	20173	38096	38112							-0.019954377990416106
TESHLSLQLSS	11	Unmodified	_TESHLSLQLSS_					0	0	0		ENST00000497401.1_1_22:18049955-18062711:+|nuORF	ENST00000497401.1_1_22:18049955-18062711:+|nuORF	ENST00000497401.1_1_22:18049955-18062711:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	600.9614868164062	2	601.306592	1200.59863	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.621	1	75.709	75.209	76.209	0.087631								0	0	0	0.56276	1	7012	7012		26.063	0.48933	1				56970	12804	38097	38113	64439	64439					0.006355840843070837
TESIEGEHAEK	11	Unmodified	_TESIEGEHAEK_					0	0	0		chr2:68053137-68053368|32|33.62|0.01|11.69|-|0|TE_info:L2c,L2c_dup19053,L2,LINE,donor,+,68053368,68054090|C1D,None|5	chr2:68053137-68053368|32|33.62|0.01|11.69|-|0|TE_info:L2c,L2c_dup19053,L2,LINE,donor,+,68053368,68054090|C1D,None|5	chr2:68053137-68053368|32|33.62|0.01|11.69|-|0|TE_info:L2c,L2c_dup19053,L2,LINE,donor,+,68053368,68054090|C1D,None|5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	410.525634765625	3	410.52633	1228.55716	-0.15788	-6.4814E-05	-1.1779	-0.00048357	-1.3358	-0.00054839	410.5257114016994	56.503	1.144	56.49	56.243	57.387	-0.012203					108	46	3	0	0	0	0.86643	1	5070	5070		2.688	0	1	1981300			56971	345	38098	38114	64440	64440					-0.04797596675052773
TESLPELALS	10	Unmodified	_TESLPELALS_					0	0	0			REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	REV__nc|ENSG00000168014|Q4AC94-2|C2CD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2809448242188	2	530.282054	1058.54956	-0.94277	-0.00049994	1.0154	0.00053847	0.072671	3.8536E-05	530.2823999418666	76.854	0.63409	76.854	76.429	77.063	0					42	27	2	0	0	0	0.6116	1	7011	7011		49.442	3.4693	1	109900	+		56972	21450	38099	38115	64441	64441					0.022622957953217337
TESPENVAL	9	Unmodified	_TESPENVAL_					0	0	0		ENSG00000117597|ENST00000491415|UTP25	ENSG00000117597|ENST00000491415|UTP25	ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2384948730469	2	480.237647	958.460741	-0.56983	-0.00027365	0.48006	0.00023054	-0.089769	-4.311E-05	480.23769823469456	52.221	0.98739	52.888	52.596	53.584	0.66729					47	23	3	0	0	0	0.21969	1	5229	5229		71.877	0	1	1035100			56973	2988	38100	38116	64442	64442					-0.020151194443315035
TESPIDFVV	9	Unmodified	_TESPIDFVV_					0	0	0		ENSG00000197329|ENST00000358912|PELI1;ENSG00000139946|ENST00000267460|PELI2	ENSG00000197329|ENST00000358912|PELI1	ENSG00000197329|ENST00000358912|PELI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.7557373046875	2	503.758215	1005.50188	-0.96536	-0.00048631	-3.1072	-0.0015653	-4.0726	-0.0020516	503.75639008045766	31.348	0.78025	31.428	31.033	31.814	0.079834					34	16	3	0	0	0	0.62081	1	2141	2141		45.952	3.5558	1	454940			56974	4403	38101	38117	64443	64443					-0.000653584048563971
TESYPFWNY	9	Unmodified	_TESYPFWNY_					0	0	0		ENST00000509936.5_1_12:112123944-112140026:+|nuORF;ENST00000514615.5_3_12:112123944-112140026:+|nuORF	ENST00000509936.5_1_12:112123944-112140026:+|nuORF	ENST00000509936.5_1_12:112123944-112140026:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	603.7576904296875	2	603.758746	1205.50294	-0.15679	-9.4666E-05	-0.018648	-1.1259E-05	-0.17544	-0.00010593	603.7590521924741	112.74	0.095032	112.77	112.73	112.83	0.028854					4	2	2	0	0	0	0.7932	1	12308	12308		19.36	2.8868	1	2616800			56975	13000	38102	38118	64444	64444					-0.09159144035947975
TETESPYQEL	10	Unmodified	_TETESPYQEL_					0	0	0		ENST00000588439.1_1_19:36395473-36398510:-|nuORF;nc|ENSG00000011600|O43914-3|TYROBP;nc|ENSG00000011600|O43914-2|TYROBP;ENSG00000011600|ENST00000262629|TYROBP	ENST00000588439.1_1_19:36395473-36398510:-|nuORF	ENST00000588439.1_1_19:36395473-36398510:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.769287109375	2	598.769508	1195.52446	0.13769	8.2443E-05	0.56206	0.00033654	0.69975	0.00041899	598.7695716660565	56.367	0.75085	56.764	56.493	57.244	0.39672					31	17	3	0	0	0	0.40664	1	5823	5823		63.534	13.998	1	1036100			56976	795	38103	38119	64445	64445					-0.06547803797889173
TETESPYQEL	10	Unmodified	_TETESPYQEL_					0	0	0		ENST00000588439.1_1_19:36395473-36398510:-|nuORF;nc|ENSG00000011600|O43914-3|TYROBP;nc|ENSG00000011600|O43914-2|TYROBP;ENSG00000011600|ENST00000262629|TYROBP	ENST00000588439.1_1_19:36395473-36398510:-|nuORF	ENST00000588439.1_1_19:36395473-36398510:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.7700805664062	2	598.769508	1195.52446	0.24628	0.00014746	0.60635	0.00036307	0.85263	0.00051053	598.769549135209	56.198	0.58406	56.757	56.512	57.096	0.55954					23	13	2	0	0	0	0.14207	1	5822	5822		96.034	26.406	1	974110			56977	795	38103	38119	64446	64446					-0.06547803797889173
TETETIAKY	9	Unmodified	_TETETIAKY_					0	0	0		nc|ENSG00000122958|O75436-2|VPS26A;ENSG00000122958|ENST00000263559|VPS26A	nc|ENSG00000122958|O75436-2|VPS26A	nc|ENSG00000122958|O75436-2|VPS26A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.26611328125	2	528.266404	1054.51826	0.12251	6.472E-05	-0.069032	-3.6467E-05	0.053482	2.8253E-05	528.2661420996432	37.726	0.51349	37.702	37.439	37.953	-0.023979					20	11	2	0	0	0	0.55097	1	2512	2512		49.442	8.8689	1	75998			56978	3254	38104	38120	64447	64447					-0.006822772387522491
TETETIAKY	9	Unmodified	_TETETIAKY_					0	0	0		nc|ENSG00000122958|O75436-2|VPS26A;ENSG00000122958|ENST00000263559|VPS26A	nc|ENSG00000122958|O75436-2|VPS26A	nc|ENSG00000122958|O75436-2|VPS26A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.7713623046875	2	528.266404	1054.51826	-0.50378	-0.00026613	0.43083	0.00022759	-0.072947	-3.8536E-05	528.2665382348284	37.732	0.4882	37.681	37.406	37.894	-0.050369					16	10	2	0	0	0	0.41566	1	2587	2587		56.721	1.2168	1	64061			56979	3254	38104	38120	64448	64448					-0.006822772387522491
TETETIAKY	9	Unmodified	_TETETIAKY_					0	0	0		nc|ENSG00000122958|O75436-2|VPS26A;ENSG00000122958|ENST00000263559|VPS26A	nc|ENSG00000122958|O75436-2|VPS26A	nc|ENSG00000122958|O75436-2|VPS26A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	528.266404	1054.51826	-1.0409	-0.00054986	0.79198	0.00041838	-0.24889	-0.00013148	528.2667763851189	37.633	0.52655	37.644	37.375	37.901	0.011173	-0.031791	0.00047625	NaN	56.721	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76647			56980	3254	38104	38120							-0.006822772387522491
TETLIKAVY	9	Unmodified	_TETLIKAVY_					0	0	0		nc|ENSG00000136891|Q9NXF1-2|TEX10;ENSG00000136891|ENST00000374902|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	nc|ENSG00000136891|Q9NXF1-2|TEX10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.7765502929688	2	519.297507	1036.58046	-0.6203	-0.00032212	0.65206	0.00033861	0.031761	1.6493E-05	519.2976912063665	57.545	1.04	57.939	57.655	58.695	0.39407					54	25	3	0	0	0	0.20789	1	6050	6050		29.15	0	1	996810			56981	4153	38105	38121	64449	64449					0.06363493900221329
TETMDSENA	9	Unmodified	_TETMDSENA_					0	0	0		nc|ENSG00000151917|Q5SZJ8-2|BEND6;nc|ENSG00000151917|Q5SZJ8-4|BEND6;ENSG00000151917|ENST00000370746|BEND6	nc|ENSG00000151917|Q5SZJ8-2|BEND6	nc|ENSG00000151917|Q5SZJ8-2|BEND6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.19500732421875	2	499.192579	996.370605	0.61622	0.00030761	0.72305	0.00036094	1.3393	0.00066856	499.192757932428	91.326	0.84515	91.776	91.422	92.268	0.44958					43	19	3	0	0	0	0.76255	1	10856	10856		35.618	6.4687	1	655970			56982	5150	38106	38122	64450	64450					-0.12772536835063875
TETMDSENA	9	Unmodified	_TETMDSENA_					0	0	0		nc|ENSG00000151917|Q5SZJ8-2|BEND6;nc|ENSG00000151917|Q5SZJ8-4|BEND6;ENSG00000151917|ENST00000370746|BEND6	nc|ENSG00000151917|Q5SZJ8-2|BEND6	nc|ENSG00000151917|Q5SZJ8-2|BEND6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	499.192579	996.370605	-0.52623	-0.00026269	1.3271	0.00066248	0.80087	0.00039979	499.1931388364102	91.675	0.5577	91.896	91.677	92.234	0.22157	0.033695	-9.824E-05	NaN	35.618	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56100			56983	5150	38106	38122							-0.12772536835063875
TETMDSENA	9	Unmodified	_TETMDSENA_					0	0	0		nc|ENSG00000151917|Q5SZJ8-2|BEND6;nc|ENSG00000151917|Q5SZJ8-4|BEND6;ENSG00000151917|ENST00000370746|BEND6	nc|ENSG00000151917|Q5SZJ8-2|BEND6	nc|ENSG00000151917|Q5SZJ8-2|BEND6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	499.192579	996.370605	0.72082	0.00035983	0.25739	0.00012849	0.97821	0.00048832	499.1925421436033	91.762	0.43016	91.918	91.68	92.111	0.15614	0.055196	-0.0011662	NaN	35.618	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52703			56984	5150	38106	38122							-0.12772536835063875
TETQEKNTL	9	Unmodified	_TETQEKNTL_					0	0	0		ENSG00000034510|ENST00000233143|TMSB10;CON__P21752;ENST00000415070.1_1_2:236791008-236791086:-|nuORF	ENSG00000034510|ENST00000233143|TMSB10	ENSG00000034510|ENST00000233143|TMSB10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.2672729492188	2	532.266936	1062.51932	0.88711	0.00047218	-1.075	-0.00057217	-0.18785	-9.9989E-05	532.26627731075	23.894	1.0893	23.513	23.063	24.153	-0.38178					48	24	3	0	0	0	1.7310000000000002E-20	4	1108	1086;1096;1108;1120		180.87	70.75	1	868860		+	56985	596	38107	38123	64451;64452;64453;64454	64453					-0.009440628698484943
TETQEKNTL	9	Unmodified	_TETQEKNTL_					0	0	0		ENSG00000034510|ENST00000233143|TMSB10;CON__P21752;ENST00000415070.1_1_2:236791008-236791086:-|nuORF	ENSG00000034510|ENST00000233143|TMSB10	ENSG00000034510|ENST00000233143|TMSB10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.2672729492188	2	532.266936	1062.51932	1.2734	0.0006778	-1.5352	-0.00081716	-0.26181	-0.00013935	532.2659893355477	23.906	0.98271	23.332	22.836	23.819	-0.57415					54	22	4	0	0	0	0.010555	4	1130	1096;1106;1118;1130		132.76	50.007	1	930310		+	56986	596	38107	38123	64455;64456;64457;64458	64458					-0.009440628698484943
TEVGEKIAL	9	Unmodified	_TEVGEKIAL_					0	0	0		ENST00000460032.1_1_X:24091216-24091381:+|nuORF;ENSG00000180574|ENST00000538173|EIF2S3B;ENSG00000130741|ENST00000253039|EIF2S3	ENST00000460032.1_1_X:24091216-24091381:+|nuORF	ENST00000460032.1_1_X:24091216-24091381:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2736511230469	2	480.274032	958.533512	-0.38119	-0.00018308	0.030823	1.4804E-05	-0.35037	-0.00016827	480.27391781955924	47.288	1.5356	47.759	47.214	48.75	0.4714					83	37	3	0	0	0	2.0213E-05	4	4493	4481;4493;4505;4517		154.12	43.998	1	9403900			56987	3675	38108	38124	64459;64460;64461;64462	64460					0.05258634349092972
TEVGEKIAL	9	Unmodified	_TEVGEKIAL_					0	0	0		ENST00000460032.1_1_X:24091216-24091381:+|nuORF;ENSG00000180574|ENST00000538173|EIF2S3B;ENSG00000130741|ENST00000253039|EIF2S3	ENST00000460032.1_1_X:24091216-24091381:+|nuORF	ENST00000460032.1_1_X:24091216-24091381:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.27392578125	2	480.274032	958.533512	-1.715	-0.00082367	1.3265	0.0006371	-0.38847	-0.00018657	480.274576489248	47.119	1.1256	48.042	47.739	48.864	0.92315					75	27	4	0	0	0	0.010555	5	4471	4461;4471;4483;4496;4508		132.76	42.388	1	9204000			56988	3675	38108	38124	64463;64464;64465;64466;64467	64464					0.05258634349092972
TEVGITNVDL	10	Unmodified	_TEVGITNVDL_					0	0	0		nc|ENSG00000118705|P04844-2|RPN2;ENSG00000118705|ENST00000237530|RPN2	nc|ENSG00000118705|P04844-2|RPN2	nc|ENSG00000118705|P04844-2|RPN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7794799804688	2	530.779679	1059.5448	-0.016892	-8.9658E-06	0.035153	1.8658E-05	0.018261	9.6924E-06	530.7795643374689	72.106	0.78479	72.656	72.361	73.146	0.55009					41	18	3	0	0	0	0.30286	2	8080	8080;8093		72.243	24.328	1	589390			56989	3042	38109	38125	64468;64469	64468					0.01741411652574243
TEVGITNVDL	10	Unmodified	_TEVGITNVDL_					0	0	0		nc|ENSG00000118705|P04844-2|RPN2;ENSG00000118705|ENST00000237530|RPN2	nc|ENSG00000118705|P04844-2|RPN2	nc|ENSG00000118705|P04844-2|RPN2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	530.779679	1059.5448	-0.48501	-0.00025743	0.72311	0.00038381	0.2381	0.00012638	530.7799090360295	72.224	0.83098	72.61	72.251	73.082	0.38581	-0.022998	0.00036241	NaN	72.243	43	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	559370			56990	3042	38109	38125							0.01741411652574243
TEVIFKVAL	9	Unmodified	_TEVIFKVAL_					0	0	0		ENST00000401554.5_1_4:38112345-38138953:+|nuORF;ENST00000407365.5_1_4:38113700-38138953:+|nuORF;nc|ENSG00000136111|O60343-4|TBC1D4;nc|ENSG00000136111|O60343-5|TBC1D4;nc|ENSG00000065882|Q86TI0|TBC1D1;nc|ENSG00000136111|O60343-2|TBC1D4;ENSG00000065882|ENST00000698857|TBC1D1;nc|ENSG00000136111|O60343-3|TBC1D4;ENSG00000136111|ENST00000377636|TBC1D4	ENST00000401554.5_1_4:38112345-38138953:+|nuORF	ENST00000401554.5_1_4:38112345-38138953:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.30950927734375	2	510.310418	1018.60628	-0.8684	-0.00044315	0.78903	0.00040265	-0.079373	-4.0505E-05	510.3105179641499	72.711	0.82422	73.097	72.75	73.575	0.38581					40	19	3	0	0	0	0.64555	1	8121	8121		44.377	3.599	1	479730			56991	1143	38110	38126	64470	64470					0.09772388142516775
TEVIFKVAL	9	Unmodified	_TEVIFKVAL_					0	0	0		ENST00000401554.5_1_4:38112345-38138953:+|nuORF;ENST00000407365.5_1_4:38113700-38138953:+|nuORF;nc|ENSG00000136111|O60343-4|TBC1D4;nc|ENSG00000136111|O60343-5|TBC1D4;nc|ENSG00000065882|Q86TI0|TBC1D1;nc|ENSG00000136111|O60343-2|TBC1D4;ENSG00000065882|ENST00000698857|TBC1D1;nc|ENSG00000136111|O60343-3|TBC1D4;ENSG00000136111|ENST00000377636|TBC1D4	ENST00000401554.5_1_4:38112345-38138953:+|nuORF	ENST00000401554.5_1_4:38112345-38138953:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.3115234375	2	510.310418	1018.60628	0.59216	0.00030218	-0.9097	-0.00046423	-0.31755	-0.00016205	510.3097121801442	72.549	1.1113	73.103	72.528	73.639	0.55386					61	26	3	0	0	0	0.6204	1	8129	8129		45.972	5.3996	1	473190			56992	1143	38110	38126	64471	64471					0.09772388142516775
TEVNDIKRTLK	11	Unmodified	_TEVNDIKRTLK_					0	0	0			REV__ENST00000490187.1_1_20:25205773-25206230:+|nuORF	REV__ENST00000490187.1_1_20:25205773-25206230:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.8421630859375	3	439.589265	1315.74596	-0.4034	-0.00017733	0.91505	0.00040224	0.51165	0.00022491	439.5897627639469	26.493	0.45255	26.315	26.113	26.565	-0.17813					16	9	2	0	0	0	0.17272	1	1476	1476		32.034	22.388	1	34394	+		56993	23249	38111	38127	64472	64472					0.10072100689080798
TEVPSLLIA	9	Unmodified	_TEVPSLLIA_					0	0	0			REV__nc|ENSG00000147642|Q9NX95-5|SYBU	REV__nc|ENSG00000147642|Q9NX95-5|SYBU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.77899169921875	2	471.778951	941.543348	-0.10976	-5.1782E-05	0.057204	2.6988E-05	-0.052554	-2.4794E-05	471.7788250865109	82.739	0.81616	82.805	82.396	83.212	0.065918					39	18	3	0	0	0	0.78058	1	8181	8181		30.504	0	1	340970	+		56994	20079	38112	38128	64473	64473					0.07023822354472031
TEVPVEPVL	9	Unmodified	_TEVPVEPVL_					0	0	0		ENSG00000100941|ENST00000216832|PNN	ENSG00000100941|ENST00000216832|PNN	ENSG00000100941|ENST00000216832|PNN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7760925292969	2	491.776408	981.538263	-0.25021	-0.00012305	0.17947	8.8259E-05	-0.070742	-3.4789E-05	491.77644489789066	71.355	1.1541	71.903	71.491	72.645	0.54756					59	27	4	0	0	0	0.47272	1	7988	7988		53.351	0.41475	1	610450			56995	1888	38113	38129	64474	64474					0.04675518491865205
TEVQIGYPL	9	Unmodified	_TEVQIGYPL_					0	0	0			REV__ENSG00000196289|ENST00000419583|BECN2	REV__ENSG00000196289|ENST00000419583|BECN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.7563171386719	2	510.274032	1018.53351	-0.82352	-0.00042022	1.4448	0.00073726	0.62131	0.00031704	510.2745760779552	72.823	0.66102	73.209	72.834	73.495	0.38581					26	15	3	0	0	0	0.20789	1	8177	8177		53.351	14.545	1	186780	+		56996	23111	38114	38130	64475	64475					0.02498634349092299
TEVSKTPEA	9	Unmodified	_TEVSKTPEA_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.2442932128906	2	481.245472	960.476391	-1.9639	-0.00094514	2.3227	0.0011178	0.35876	0.00017265	481.2464659109781	24.432	0.7729	24.432	24.034	24.807	0					53	33	3	0	0	0	0.29259	1	823	823		65.465	10.689	1	66817			56997	2000	38115	38131	64476	64476					-0.0054283292729451205
TEVSKTPEA	9	Unmodified	_TEVSKTPEA_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	481.245472	960.476391	0.59836	0.00028796	6.3998	0.0030799	6.9982	0.0033678	481.2462762880058	24.1	0.18867	24.114	24.007	24.196	0.013996	-0.15935	0.0014474	NaN	65.465	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45311			56998	2000	38115	38131							-0.0054283292729451205
TEVSLLRVGW	10	Unmodified	_TEVSLLRVGW_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.8292236328125	2	580.327131	1158.63971	-0.89302	-0.00051824	0.97199	0.00056407	0.07897	4.5828E-05	580.3275260112922	76.673	0.58533	76.722	76.428	77.013	0.049194					49	22	3	0	0	0	0.51401	1	7419	7419		54.722	10.606	1	169490			56999	8635	38116	38132	64477	64477					0.06673389914431027
TEVSLLRVGW	10	Unmodified	_TEVSLLRVGW_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	580.327131	1158.63971	0.19583	0.00011365	0.020744	1.2039E-05	0.21658	0.00012568	580.327023448311	76.571	0.45546	76.523	76.309	76.764	-0.048264	-0.071321	-0.00049257	NaN	54.722	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121020			57000	8635	38116	38132							0.06673389914431027
TEVSLLRVGW	10	Unmodified	_TEVSLLRVGW_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	580.327131	1158.63971	-0.43908	-0.00025481	0.34981	0.00020301	-0.089265	-5.1803E-05	580.3271390118223	76.49	0.47293	76.538	76.273	76.746	0.047981	-0.056108	-0.00011063	NaN	54.722	50	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	148570			57001	8635	38116	38132							0.06673389914431027
TEVSPKEL	8	Unmodified	_TEVSPKEL_					0	0	0			REV__CON__Q3SZH5	REV__CON__Q3SZH5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.7478942871094	2	451.745108	901.475663	-0.15926	-7.1944E-05	1.5976	0.0007217	1.4383	0.00064975	451.7456935089162	34.126	0.74651	34.336	34.065	34.812	0.21002					38	17	3	0	0	0	0.60357	1	2494	2494		71.296	2.811	1	1779600	+	+	57002	16014	38117	38133	64478	64478					0.02098372423665751
TEVTGHRW	8	Unmodified	_TEVTGHRW_					0	0	0		ENST00000576925.3_1_19:572634-579657:+|nuORF;chr19:579656-581444|63|41.17|0.0|21.97|+|ENST00000618112|BSG,None;nc|ENSG00000172270|P35613-2|BSG;ENSG00000172270|ENST00000333511|BSG	ENST00000576925.3_1_19:572634-579657:+|nuORF	ENST00000576925.3_1_19:572634-579657:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.24591064453125	2	493.246141	984.477728	0.44489	0.00021944	-0.39962	-0.00019711	0.045268	2.2328E-05	493.24582366684365	27.777	1.5267	27.813	27.395	28.922	0.03607					129	51	4	0	0	0	0.28455	7	1279	1247;1256;1264;1272;1279;1289;1327		104.75	38.379	1	868330			57003	298	38118	38134	64479;64480;64481;64482;64483;64484;64485	64483					-0.015131540478705574
TEVTGHRW	8	Unmodified	_TEVTGHRW_					0	0	0		ENST00000576925.3_1_19:572634-579657:+|nuORF;chr19:579656-581444|63|41.17|0.0|21.97|+|ENST00000618112|BSG,None;nc|ENSG00000172270|P35613-2|BSG;ENSG00000172270|ENST00000333511|BSG	ENST00000576925.3_1_19:572634-579657:+|nuORF	ENST00000576925.3_1_19:572634-579657:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.24566650390625	2	493.246141	984.477728	-0.22235	-0.00010967	0.062626	3.089E-05	-0.15972	-7.8783E-05	493.2460736786689	27.772	1.7235	27.734	27.305	29.029	-0.038523					102	45	4	0	0	0	0.14669	6	1344	1334;1344;1354;1363;1375;1399		111.65	43.88	1	1093300			57004	298	38118	38134	64486;64487;64488;64489;64490;64491	64487					-0.015131540478705574
TEVTGHRW	8	Unmodified	_TEVTGHRW_					0	0	0		ENST00000576925.3_1_19:572634-579657:+|nuORF;chr19:579656-581444|63|41.17|0.0|21.97|+|ENST00000618112|BSG,None;nc|ENSG00000172270|P35613-2|BSG;ENSG00000172270|ENST00000333511|BSG	ENST00000576925.3_1_19:572634-579657:+|nuORF	ENST00000576925.3_1_19:572634-579657:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.2463073730469	2	493.246141	984.477728	-1.1617	-0.000573	0.94861	0.0004679	-0.21308	-0.0001051	493.24654239461523	27.911	1.9472	27.888	27.422	29.369	-0.023556					123	54	4	0	0	0	0.36305	8	1336	1287;1298;1305;1313;1323;1336;1369;1385		99.375	25.12	1	1012800			57005	298	38118	38134	64492;64493;64494;64495;64496;64497;64498;64499	64497					-0.015131540478705574
TEWQSGQRW	9	Unmodified	_TEWQSGQRW_					0	0	0		ENSG00000130203|ENST00000252486|APOE	ENSG00000130203|ENST00000252486|APOE	ENSG00000130203|ENST00000252486|APOE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.272216796875	2	589.272887	1176.53122	-0.45893	-0.00027043	0.85282	0.00050254	0.39389	0.00023211	589.2732968201477	47.608	0.46107	47.598	47.391	47.852	-0.0093231					23	16	2	0	0	0	0.10914	1	3891	3891		90.601	39.408	1	245030			57006	3624	38119	38135	64500	64500					-0.04998401335978997
TEWQSGQRW	9	Unmodified	_TEWQSGQRW_					0	0	0		ENSG00000130203|ENST00000252486|APOE	ENSG00000130203|ENST00000252486|APOE	ENSG00000130203|ENST00000252486|APOE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.2750244140625	2	589.272887	1176.53122	-0.2115	-0.00012463	0.62535	0.0003685	0.41385	0.00024387	589.2731642645796	47.577	0.55839	47.55	47.296	47.854	-0.026737					28	19	2	0	0	0	0.086373	2	3968	3959;3968		95.815	31.608	1	292610			57007	3624	38119	38135	64501;64502	64502					-0.04998401335978997
TEWQSGQRW	9	Unmodified	_TEWQSGQRW_					0	0	0		ENSG00000130203|ENST00000252486|APOE	ENSG00000130203|ENST00000252486|APOE	ENSG00000130203|ENST00000252486|APOE	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	589.272887	1176.53122	-1.4322	-0.00084393	2.2637	0.0013339	0.83153	0.00049	589.2741624842109	47.639	0.456	47.637	47.386	47.842	-0.002449	0.041534	0.0013553	NaN	95.815	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	368600			57008	3624	38119	38135							-0.04998401335978997
TEYIEAITI	9	Unmodified	_TEYIEAITI_					0	0	0			REV__nc|ENSG00000125814|Q9H115-3|NAPB	REV__nc|ENSG00000125814|Q9H115-3|NAPB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.2788696289062	2	526.779148	1051.54374	0.4298	0.00022641	0.9734	0.00051277	1.4032	0.00073918	526.7794673445285	62.586	1.6533	62.553	62.242	63.895	-0.03371					150	73	4	0	0	0	0.47272	1	5957	5957		53.351	3.3269	1	712450	+		57009	18670	38120	38136	64503	64503					0.02003197283670488
TEYRLTLYT	9	Unmodified	_TEYRLTLYT_					0	0	0		ENSG00000114270|ENST00000681320|COL7A1;nc|ENSG00000114270|Q02388-2|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	580.1326904296875	2	580.303321	1158.59209	-0.29548	-0.00017147	-3.2409	-0.0018807	-3.5364	-0.0020522	580.3003121854821	113.07	0.059021	113.07	113.03	113.09	0					4	2	2	0	0	0	0.7932	1	11692	11692		25.574	8.106	1	10493			57010	2764	38121	38137	64504	64504					0.01913690923561262
TEYRLTLYT	9	Unmodified	_TEYRLTLYT_					0	0	0		ENSG00000114270|ENST00000681320|COL7A1;nc|ENSG00000114270|Q02388-2|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	ENSG00000114270|ENST00000681320|COL7A1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	580.303321	1158.59209	0.88113	0.00051132	3.8108	0.0022114	4.692	0.0027228	580.8085031152273	112.62	0.11078	112.68	112.59	112.7	0.066032	-0.19501	0.0014776	NaN	25.574	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10920			57011	2764	38121	38137							0.01913690923561262
TFALKLFR	8	Unmodified	_TFALKLFR_					0	0	0			REV__ENST00000510700.5_2_4:20703193-20703457:+|nuORF	REV__ENST00000510700.5_2_4:20703193-20703457:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.3059997558594	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.615	1	52.611	52.111	53.111	-0.0033035								0	0	0	0.30673	1	4560	4560		15.642	1.8665	1		+		57012	27958	38122	38138	64505	64505					0.0988724492780193
TFALKLLLF	9	Unmodified	_TFALKLLLF_					0	0	0			REV__ENST00000396582.6_1_14:32626211-32626439:+|nuORF	REV__ENST00000396582.6_1_14:32626211-32626439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.3394775390625	2	533.338978	1064.6634	1.2441	0.00066355	1.0363	0.00055269	2.2804	0.0012162	533.3394000177375	99.114	2.7086	99.162	98.677	101.39	0.047531					171	63	4	0	0	0	0.7932	1	10754	10754		19.36	7.1531	1	3009900	+		57013	26147	38123	38139	64506	64506					0.133658554188969
TFARVPVATY	10	Unmodified	_TFARVPVATY_					0	0	0		ENST00000496539.1_1_7:44157490-44163110:-|nuORF;ENST00000470867.5_1_7:44156819-44163110:-|nuORF;ENST00000463464.5_1_7:44156730-44161694:-|nuORF;ENSG00000106628|ENST00000610533|POLD2	ENST00000496539.1_1_7:44157490-44163110:-|nuORF	ENST00000496539.1_1_7:44157490-44163110:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.80810546875	2	562.808574	1123.60259	-1.1725	-0.00065991	-2.1222	-0.0011944	-3.2947	-0.0018543	562.8072126493548	34.141	0.63573	34.136	33.818	34.454	-0.0047417					21	14	2	0	0	0	0.86272	1	2039	2039		24.519	0	1	54821			57014	12786	38124	38140	64507	64507					0.04573718368669688
TFCIDVCSL	9	Unmodified	_TFCIDVCSL_					0	0	0			REV__ENSG00000188558|ENST00000641804|OR2G6	REV__ENSG00000188558|ENST00000641804|OR2G6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.290283203125	2	500.727546	999.440539	-0.9042	-0.00045276	1.778	0.00089031	0.87383	0.00043755	500.7280375339131	88.175	1.6549	88.638	88.018	89.673	0.46312					47	40	2	0	0	0	0.20789	1	10348	10348		21.96	3.6355	1	140000	+		57015	23011	38125	38141	64508	64508					-0.05920329700154525
TFCIDVCSL	9	Unmodified	_TFCIDVCSL_					0	0	0			REV__ENSG00000188558|ENST00000641804|OR2G6	REV__ENSG00000188558|ENST00000641804|OR2G6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2906799316406	2	500.727546	999.440539	-0.60962	-0.00030525	1.1739	0.00058778	0.56423	0.00028253	500.7277017786864	87.175	0.99057	87.629	86.978	87.968	0.4543					30	23	2	0	0	0	0.20789	1	10216	10216		29.15	3.6994	1	155490	+		57016	23011	38125	38141	64509	64509					-0.05920329700154525
TFCNQRVPI	9	Unmodified	_TFCNQRVPI_					0	0	0			REV__nc|ENSG00000198216|Q15878-2|CACNA1E	REV__nc|ENSG00000198216|Q15878-2|CACNA1E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	539.282470703125	2	539.279126	1076.5437	0.18795	0.00010136	4.3977	0.0023716	4.5856	0.0024729	539.2813757758174	40.859	0.81373	40.814	40.583	41.397	-0.045467					53	28	3	0	0	0	0.22631	1	2637	2637		71.296	2.5089	1	680430	+		57017	23309	38126	38142	64510	64510					0.008489188026715055
TFCNQRVPI	9	Unmodified	_TFCNQRVPI_					0	0	0			REV__nc|ENSG00000198216|Q15878-2|CACNA1E	REV__nc|ENSG00000198216|Q15878-2|CACNA1E	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	539.279126	1076.5437	-0.43477	-0.00023446	4.5666	0.0024627	4.1318	0.0022282	539.281357884656	41.031	0.42111	40.99	40.755	41.176	-0.04081	0.054577	-0.00010847	NaN	71.296	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112460	+		57018	23309	38126	38142							0.008489188026715055
TFCNQRVPI	9	Unmodified	_TFCNQRVPI_					0	0	0			REV__nc|ENSG00000198216|Q15878-2|CACNA1E	REV__nc|ENSG00000198216|Q15878-2|CACNA1E	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	539.279126	1076.5437	-0.7387	-0.00039836	5.5621	0.0029995	4.8234	0.0026012	539.7837794868688	40.942	0.42143	40.948	40.837	41.259	0.0065727	0.012783	0.0009653	NaN	71.296	13	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85850	+		57019	23309	38126	38142							0.008489188026715055
TFCNQRVPI	9	Unmodified	_TFCNQRVPI_					0	0	0			REV__nc|ENSG00000198216|Q15878-2|CACNA1E	REV__nc|ENSG00000198216|Q15878-2|CACNA1E	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	539.279126	1076.5437	0.18795	0.00010136	4.3977	0.0023716	4.5856	0.0024729	539.2813757758174	40.859	0.81373	40.814	40.583	41.397	-0.045467	-0.1215	-0.00029063	NaN	71.296	53	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	680430	+		57020	23309	38126	38142							0.008489188026715055
TFDAGLQAF	9	Unmodified	_TFDAGLQAF_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2376708984375	2	485.23745	968.460347	0.24887	0.00012076	-0.40552	-0.00019678	-0.15665	-7.6012E-05	485.2370223529383	77.388	1.7116	77.793	77.425	79.137	0.40531					96	40	4	0	0	0	0.014285	6	8811	8787;8798;8811;8823;8835;8848		129.68	38.906	1	1559200			57021	8189	38127	38143	64511;64512;64513;64514;64515;64516	64513					-0.025144943735199377
TFDAGLQAF	9	Unmodified	_TFDAGLQAF_					0	0	0		nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2376708984375	2	485.23745	968.460347	-0.31005	-0.00015045	0.42088	0.00020423	0.11083	5.3777E-05	485.2375206889683	77.292	1.6306	77.86	77.453	79.084	0.56835					81	38	3	0	0	0	0.01944	7	8837	8803;8814;8825;8837;8850;8862;8875		125.81	28.341	1	1904300			57022	8189	38127	38143	64517;64518;64519;64520;64521;64522;64523	64520					-0.025144943735199377
TFDASRTTF	9	Unmodified	_TFDASRTTF_					0	0	0		ENST00000554315.5_1_14:73753704-73876743:-|nuORF;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;ENSG00000133961|ENST00000555238|NUMB;ENST00000553997.5_1_14:73748216-73753941:-|nuORF	ENST00000554315.5_1_14:73753704-73876743:-|nuORF	ENST00000554315.5_1_14:73753704-73876743:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.24853515625	2	523.251089	1044.48762	-0.31778	-0.00016628	0.52672	0.00027561	0.20894	0.00010933	523.2512121909256	46.685	1.2657	47.157	46.856	48.121	0.47139					47	30	2	0	0	0	0.076066	2	4407	4407;4425		98.582	33.117	1	2250000			57023	3901	38128	38144	64524;64525	64524					-0.032840108331583906
TFDASRTTF	9	Unmodified	_TFDASRTTF_					0	0	0		ENST00000554315.5_1_14:73753704-73876743:-|nuORF;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;ENSG00000133961|ENST00000555238|NUMB;ENST00000553997.5_1_14:73748216-73753941:-|nuORF	ENST00000554315.5_1_14:73753704-73876743:-|nuORF	ENST00000554315.5_1_14:73753704-73876743:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2518920898438	2	523.251089	1044.48762	-0.78661	-0.0004116	0.80406	0.00042072	0.017444	9.1275E-06	523.2513974039443	46.493	1.3519	47.416	47.151	48.503	0.92315					50	32	2	0	0	0	0.12394	4	4394	4394;4407;4417;4430		88.177	5.4265	1	2577500			57024	3901	38128	38144	64526;64527;64528;64529	64526					-0.032840108331583906
TFDDIVHSF	9	Unmodified	_TFDDIVHSF_					0	0	0		ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.80029296875	2	540.753464	1079.49238	-1.3464	-0.0007281	1.8696	0.001011	0.5232	0.00028292	540.7542226676145	73.085	0.95155	73.473	73.168	74.119	0.38779					41	25	3	0	0	0	0.034797	1	8204	8204		125.81	53.937	1	693870			57025	6518	38129	38145	64530	64530					-0.044191266903681026
TFDDIVHSF	9	Unmodified	_TFDDIVHSF_					0	0	0		ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8004760742188	2	540.753464	1079.49238	-0.34157	-0.0001847	0.39937	0.00021596	0.057803	3.1257E-05	540.753495124597	73.011	0.63464	73.565	73.232	73.867	0.55386					33	16	3	0	0	0	0.034797	1	8205	8205		111.65	45.751	1	645590			57026	6518	38129	38145	64531	64531					-0.044191266903681026
TFDIASDAF	9	Unmodified	_TFDIASDAF_					0	0	0		ENSG00000102547|ENST00000409308|CAB39L;ENST00000478152.1_1_2:231655619-231663633:+|nuORF;ENSG00000135932|ENST00000258418|CAB39	ENSG00000102547|ENST00000409308|CAB39L;ENST00000478152.1_1_2:231655619-231663633:+|nuORF	ENSG00000102547|ENST00000409308|CAB39L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7261962890625	2	493.726915	985.439277	-0.19684	-9.7184E-05	0.42117	0.00020794	0.22433	0.00011076	493.7268772260669	80.155	1.7003	80.682	80.359	82.06	0.52676					85	40	4	0	0	0	0.18601	4	9241	9212;9241;9265;9277		76.774	11.002	1	1032800			57027	2009;4073	38130	38146	64532;64533;64534;64535	64533					-0.054025044730451555
TFDKGVAKKL	10	Unmodified	_TFDKGVAKKL_					0	0	0		nc|ENSG00000118729|O14958-2|CASQ2;ENSG00000118729|ENST00000261448|CASQ2	nc|ENSG00000118729|O14958-2|CASQ2	nc|ENSG00000118729|O14958-2|CASQ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.829833984375	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.86698	1	9169	9169		28.081	2.5074	1	5219600			57028	3043	38131	38147	64536	64536					0.10094577919812764
TFDKGVAKKL	10	Unmodified	_TFDKGVAKKL_					0	0	0		nc|ENSG00000118729|O14958-2|CASQ2;ENSG00000118729|ENST00000261448|CASQ2	nc|ENSG00000118729|O14958-2|CASQ2	nc|ENSG00000118729|O14958-2|CASQ2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.830078125	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.82886	2	8874	8874;9040		37.812	2.6595	1	5453100			57029	3043	38131	38147	64537;64538	64537					0.10094577919812764
TFDKLQQIY	9	Unmodified	_TFDKLQQIY_					0	0	0			REV__ENSG00000162994|ENST00000401408|CLHC1	REV__ENSG00000162994|ENST00000401408|CLHC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3095703125	2	578.305864	1154.59717	-0.8638	-0.00049954	0.37643	0.00021769	-0.48737	-0.00028185	578.305931030003	52.909	0.73541	52.905	52.58	53.316	-0.0032997					43	21	3	0	0	0	0.64922	2	4613	4602;4613		44.117	0	1	307760	+		57030	20870	38132	38148	64539;64540	64540					0.026059947862222543
TFDKLQQIY	9	Unmodified	_TFDKLQQIY_					0	0	0			REV__ENSG00000162994|ENST00000401408|CLHC1	REV__ENSG00000162994|ENST00000401408|CLHC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	578.3073120117188	2	578.305864	1154.59717	-0.34205	-0.00019781	-0.37475	-0.00021672	-0.7168	-0.00041453	578.3054794983877	52.853	0.94507	52.87	52.533	53.478	0.017487					51	25	3	0	0	0	0.55097	2	4626	4626;4634		49.442	3.4693	1	259410	+		57031	20870	38132	38148	64541;64542	64541					0.026059947862222543
TFDKLQQIY	9	Unmodified	_TFDKLQQIY_					0	0	0			REV__ENSG00000162994|ENST00000401408|CLHC1	REV__ENSG00000162994|ENST00000401408|CLHC1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	578.305864	1154.59717	-0.8638	-0.00049954	0.37643	0.00021769	-0.48737	-0.00028185	578.305931030003	52.909	0.73541	52.905	52.58	53.316	-0.0032997	0.017367	0.00035737	NaN	49.442	43	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	307760	+		57032	20870	38132	38148							0.026059947862222543
TFDKLQQIY	9	Unmodified	_TFDKLQQIY_					0	0	0			REV__ENSG00000162994|ENST00000401408|CLHC1	REV__ENSG00000162994|ENST00000401408|CLHC1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	578.305864	1154.59717	-0.34205	-0.00019781	-0.37475	-0.00021672	-0.7168	-0.00041453	578.3054794983877	52.853	0.94507	52.87	52.533	53.478	0.017487	-0.017367	-0.00051144	NaN	49.442	51	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	259410	+		57033	20870	38132	38148							0.026059947862222543
TFDLIEKGY	9	Unmodified	_TFDLIEKGY_					0	0	0		nc|ENSG00000170921|Q9HCD6|TANC2;nc|ENSG00000170921|Q9HCD6-2|TANC2;ENSG00000170921|ENST00000689528|TANC2;nc|ENSG00000170921|Q9HCD6-3|TANC2;nc|ENSG00000170921|Q9HCD6-4|TANC2	nc|ENSG00000170921|Q9HCD6|TANC2	nc|ENSG00000170921|Q9HCD6|TANC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.2766723632812	2	543.279315	1084.54408	0.14901	8.0955E-05	-0.23195	-0.00012601	-0.082939	-4.5059E-05	543.2789595922179	52.097	0.58989	52.073	51.781	52.371	-0.023743					23	13	2	0	0	0	0.33718	1	4579	4579		62.107	3.8775	1	99080			57034	6624	38133	38149	64543	64543					0.005186170035358373
TFDLIEKGY	9	Unmodified	_TFDLIEKGY_					0	0	0		nc|ENSG00000170921|Q9HCD6|TANC2;nc|ENSG00000170921|Q9HCD6-2|TANC2;ENSG00000170921|ENST00000689528|TANC2;nc|ENSG00000170921|Q9HCD6-3|TANC2;nc|ENSG00000170921|Q9HCD6-4|TANC2	nc|ENSG00000170921|Q9HCD6|TANC2	nc|ENSG00000170921|Q9HCD6|TANC2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	543.279315	1084.54408	-0.19877	-0.00010799	-0.26727	-0.0001452	-0.46604	-0.00025319	543.2786729273075	52.189	0.55175	52.187	51.874	52.426	-0.0020447	0.056919	-2.4432E-05	NaN	62.107	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90811			57035	6624	38133	38149							0.005186170035358373
TFDLQRIGF	9	Unmodified	_TFDLQRIGF_					0	0	0		chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3;nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.7928466796875	2	548.792924	1095.57129	0.65784	0.00036102	-0.26417	-0.00014497	0.39367	0.00021604	548.7924537921606	77.703	1.2057	77.653	77.353	78.559	-0.050797					96	44	3	0	0	0	0.36616	1	7778	7778		60.118	17.254	1	254530			57036	512	38134	38150	64544	64544					0.027331453345595946
TFDLQRIGF	9	Unmodified	_TFDLQRIGF_					0	0	0		chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3;nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.79296875	2	548.792924	1095.57129	-0.48765	-0.00026762	0.71306	0.00039132	0.2254	0.0001237	548.7930251650569	77.063	1.0836	77.462	77.295	78.378	0.39969					45	26	2	0	0	0	0.01944	1	8763	8763		125.81	29.624	1	559140			57037	512	38134	38150	64545	64545					0.027331453345595946
TFDLQRIGF	9	Unmodified	_TFDLQRIGF_					0	0	0		chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3;nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.793212890625	2	548.792924	1095.57129	-0.21678	-0.00011897	0.12598	6.9137E-05	-0.090799	-4.983E-05	548.7929563101704	76.956	1.0318	77.524	77.308	78.34	0.56836					47	25	3	0	0	0	0.065196	2	8792	8780;8792		101.6	24.936	1	528280			57038	512	38134	38150	64546;64547	64547					0.027331453345595946
TFDLQRIGF	9	Unmodified	_TFDLQRIGF_					0	0	0		chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3;nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	chr8:15673836-15743538|62|17.58|0.96|4.19|+|ENST00000515859|TUSC3,TUSC3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	548.792924	1095.57129	-0.51626	-0.00028332	1.1572	0.00063506	0.64093	0.00035174	548.793141893541	77.689	1.1055	77.741	77.457	78.562	0.052704	0.14491	0.00095194	NaN	125.81	90	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	335280			57039	512	38134	38150							0.027331453345595946
TFDLTVVSY	9	Unmodified	_TFDLTVVSY_					0	0	0		nc|ENSG00000129003|Q709C8-2|VPS13C;ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7693481445312	2	522.76604	1043.51753	0.18237	9.5339E-05	0.26425	0.00013814	0.44662	0.00023348	522.7660473919881	84.541	1.8148	84.976	84.627	86.441	0.43538					92	44	4	0	0	0	0.14386	2	9845	9845;9856		84.916	21.609	1	1088400			57040	3570	38135	38151	64548;64549	64548					-0.0024907188781071454
TFDLTVVSY	9	Unmodified	_TFDLTVVSY_					0	0	0		nc|ENSG00000129003|Q709C8-2|VPS13C;ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.7656860351562	2	522.76604	1043.51753	-0.079786	-4.1709E-05	0.36529	0.00019096	0.28551	0.00014925	522.7661259812771	84.568	1.8118	85.016	84.674	86.486	0.44736					87	44	4	0	0	0	0.073112	2	9902	9890;9902		99.375	46.024	1	1211400			57041	3570	38135	38151	64550;64551	64551					-0.0024907188781071454
TFDVAPSRL	9	Unmodified	_TFDVAPSRL_					0	0	0		ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	503.27154541015625	2	503.271824	1004.5291	-0.24216	-0.00012187	0.12699	6.3913E-05	-0.11517	-5.796E-05	503.2717238342241	53.147	1.1188	53.561	53.25	54.369	0.4139					45	26	2	0	0	0	0.39367	1	5354	5354		58.23	17.657	1	919900			57042	2066	38136	38152	64552	64552					0.027011699261947797
TFDVAPSRL	9	Unmodified	_TFDVAPSRL_					0	0	0		ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.2712097167969	2	503.271824	1004.5291	0.27835	0.00014008	-0.3893	-0.00019593	-0.11096	-5.5842E-05	503.2715466601288	52.947	0.99549	53.562	53.283	54.278	0.61436					48	23	3	0	0	0	0.48102	2	5354	5344;5354		52.937	12.159	1	934510			57043	2066	38136	38152	64553;64554	64554					0.027011699261947797
TFFFLTLL	8	Unmodified	_TFFFLTLL_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2;ENST00000489018.1_1_1:109812400-109812848:+|nuORF	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904052734375	2	501.288954	1000.56336	-0.06476	-3.2463E-05	3.0665	0.0015372	3.0017	0.0015047	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.88915	1	9085	9085		35.201	35.201	1	9565500			57044	4602	38137	38153	64555	64555					0.06309618085094826
TFFGAVVMMI	10	Unmodified	_TFFGAVVMMI_					0	0	0			REV__ENST00000563663.5_1_15:75137426-75165648:-|nuORF	REV__ENST00000563663.5_1_15:75137426-75165648:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.2839965820312	2	558.285031	1114.55551	0.44639	0.00024921	-1.1962	-0.00066781	-0.74979	-0.0004186	558.2840615555907	75.271	0.56576	75.318	75.022	75.588	0.04644					35	15	3	0	0	0	0.86305	1	7312	7312		31.955	0	1	94987	+		57045	28822	38138	38154	64556	64556					0.0028139950165950722
TFFLLLFIIVQ	11	Unmodified	_TFFLLLFIIVQ_					0	0	0			REV__ENSG00000197706|ENST00000343399|OR6C74	REV__ENSG00000197706|ENST00000343399|OR6C74	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9447021484375	3	451.944209	1352.8108	-1.6541	-0.00074756	-0.19406	-8.7704E-05	-1.8482	-0.00083527	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.71207	1	4675	4675		29.551	6.1728	1	430100	+		57046	23262	38139	38155	64557	64557					0.14850327233034477
TFFMAFLFN	9	Unmodified	_TFFMAFLFN_					0	0	0		ENST00000505614.1_1_5:141515339-141517465:+|nuORF;ENSG00000131507|ENST00000253814|NDFIP1	ENST00000505614.1_1_5:141515339-141517465:+|nuORF	ENST00000505614.1_1_5:141515339-141517465:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.2771606445312	2	569.275521	1136.53649	-0.34666	-0.00019734	-0.7899	-0.00044967	-1.1366	-0.00064701	569.2749940936244	58.625	1.0905	58.617	58.275	59.365	-0.0074425					124	43	4	0	0	0	0.78058	1	5051	5051		30.504	1.3336	1	2598100			57047	3736	38140	38156	64558	64558					-0.026318137977341394
TFFPSVQR	8	Unmodified	_TFFPSVQR_					0	0	0		ENST00000250916.5_1_19:1854033-1854234:-|nuORF	ENST00000250916.5_1_19:1854033-1854234:-|nuORF	ENST00000250916.5_1_19:1854033-1854234:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7957458496094	2	491.261259	980.507966	-1.2621	-0.00062004	4.3512	0.0021376	3.0891	0.0015175	491.2629719423729	47.231	0.30037	47.702	47.476	47.776	0.4714					10	6	2	0	0	0	0.4196	1	4454	4454		19.997	0	1	86965			57048	9294	38141	38157	64559	64559					0.016932046173337767
TFFRFYRRQIR	11	Unmodified	_TFFRFYRRQIR_					0	0	0			REV__ENSG00000101407|ENST00000373447|TTI1	REV__ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.6329956054688	3	530.631909	1588.8739	0.22672	0.0001203	3.0706	0.0016294	3.2973	0.0017497	530.6335626505213	39.05	0.59222	38.997	38.674	39.266	-0.052727					43	17	3	0	0	0	0.80813	1	2365	2365		9.6461	0	1	338380	+		57049	17277	38142	38158	64560	64560					0.10301705793608562
TFGGGGGG	8	Unmodified	_TFGGGGGG_					0	0	0		nc|ENSG00000083544|Q9H7E2-2|TDRD3;chr13:60483846-60485802|46|13.52|0.65|4.38|+|ENST00000621840|TDRD3,TDRD3;nc|ENSG00000083544|Q9H7E2|TDRD3;ENSG00000083544|ENST00000377881|TDRD3;ENST00000484389.6_1_13:61058882-61083684:+|nuORF	nc|ENSG00000083544|Q9H7E2-2|TDRD3	nc|ENSG00000083544|Q9H7E2-2|TDRD3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.7886352539062	1	609.262716	608.255439	-0.41306	-0.00025166	-3.1797	-0.0019372	-3.5927	-0.0021889	609.2609615661808	71.239	0.79474	71.2	70.813	71.608	-0.039009					59	36	2	0	0	0	0.4196	1	6900	6900		1.3276	0	1	130150			57050	159	38143	38159	64561	64561					-0.06435808393234765
TFGPAGVRSP	10	Unmodified	_TFGPAGVRSP_					0	0	0		nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1;ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	nc|ENSG00000138688|Q2LD37-4|BLTP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.763671875	2	494.764166	987.513779	0.010174	5.0339E-06	-0.49257	-0.0002437	-0.48239	-0.00023867	494.7639179313361	52.272	0.66656	52.27	51.915	52.582	-0.0020447					24	15	2	0	0	0	0.60985	1	4537	4537		49.536	6.6718	1	119400			57051	14953	38144	38160	64562	64562					0.01952303128996391
TFGTPLLQ	8	Unmodified	_TFGTPLLQ_					0	0	0		ENSG00000111696|ENST00000392876|NT5DC3;nc|ENSG00000111696|Q86UY8-2|NT5DC3	ENSG00000111696|ENST00000392876|NT5DC3	ENSG00000111696|ENST00000392876|NT5DC3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.7441711425781	2	438.744911	875.475269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.788	1	16.865	16.365	17.365	0.07715								0	0	0	0.29452	1	138	138		33.516	1.5607	1				57052	2604	38145	38161	64563	64563					0.03254997494491363
TFHVIKKRLM	10	Unmodified	_TFHVIKKRLM_					0	0	0			REV__nc|ENSG00000081377|O60729-5|CDC14B	REV__nc|ENSG00000081377|O60729-5|CDC14B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	636.3436889648438	2	636.884093	1271.75363	0.56993	0.00036298	-4.267	-0.0027176	-3.6971	-0.0023546	637.3851351089754	60.154	0.10851	60.271	60.205	60.313	0.11676					4	2	2	0	0	0	0.37624	1	5200	5200		13.454	0	1	26738	+		57053	16823	38146	38162	64564	64564					0.12862581475656043
TFIERKLSFE	10	Unmodified	_TFIERKLSFE_					0	0	0		ENSG00000236699|ENST00000420470|ARHGEF38	ENSG00000236699|ENST00000420470|ARHGEF38	ENSG00000236699|ENST00000420470|ARHGEF38	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.30645751953125	3	423.899439	1268.67649	1.0265	0.00043515	3.4064	0.001444	4.433	0.0018791	424.23518664458095	22.264	0.45224	21.84	21.559	22.011	-0.42415					12	9	2	0	0	0	0.37624	1	876	876		14.086	1.1285	1	68415			57054	8756	38147	38163	64565	64565					0.052896417403189844
TFIFVTVC	8	Unmodified	_TFIFVTVC_					0	0	0			REV__ENST00000463502.1_1_2:161993487-161993541:+|nuORF	REV__ENST00000463502.1_1_2:161993487-161993541:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.2429504394531	2	465.243689	928.472826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.072	1	73.201	72.701	73.701	0.1292								0	0	0	0.29452	1	6716	6716		33.516	0.70317	1		+		57055	27077	38148	38164	64566	64566					0.005728257651526292
TFIGGQKLVSA	11	Unmodified	_TFIGGQKLVSA_					0	0	0		ENST00000379514.2_1_9:33503785-33510678:-|nuORF	ENST00000379514.2_1_9:33503785-33510678:-|nuORF	ENST00000379514.2_1_9:33503785-33510678:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8202514648438	2	560.821681	1119.62881	-0.54677	-0.00030664	-2.8297	-0.001587	-3.3765	-0.0018936	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.65746	1	9056	9056		37.812	1.3648	1	408930			57056	10895	38149	38165	64567	64567					0.07377987540144204
TFIGGQKLVSA	11	Unmodified	_TFIGGQKLVSA_					0	0	0		ENST00000379514.2_1_9:33503785-33510678:-|nuORF	ENST00000379514.2_1_9:33503785-33510678:-|nuORF	ENST00000379514.2_1_9:33503785-33510678:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.8202514648438	2	560.821681	1119.62881	0.38825	0.00021774	-3.7813	-0.0021206	-3.393	-0.0019029	560.8194818178797	92.394	2.729	92.618	91.343	94.072	0.22352					209	64	4	0	0	0	0.7144	1	9289	9289		29.17	1.2878	1	816880			57057	10895	38149	38165	64568	64568					0.07377987540144204
TFILQKNIE	9	Unmodified	_TFILQKNIE_					0	0	0			REV__ENSG00000116918|ENST00000366639|TSNAX	REV__ENSG00000116918|ENST00000366639|TSNAX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.3143310546875	2	553.316232	1104.61791	-0.13159	-7.2811E-05	0.61579	0.00034073	0.4842	0.00026792	553.3165485603674	74.96	1.0987	75.525	75.249	76.347	0.56458					56	26	3	0	0	0	0.44421	1	8522	8522		54.776	0	1	984510	+		57058	18234	38150	38166	64569	64569					0.06978585165848017
TFILVCAL	8	Unmodified	_TFILVCAL_					0	0	0			REV__ENSG00000168412|ENST00000307161|MTNR1A	REV__ENSG00000168412|ENST00000307161|MTNR1A	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.2538146972656	2	440.254057	878.493561	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.955	1	75.043	74.543	75.543	0.087631								0	0	0	0.29199	1	6922	6922		29.842	0	1		+		57059	21485	38151	38167	64570	64570					0.049454161448238665
TFIPILQR	8	Unmodified	_TFIPILQR_					0	0	0			REV__ENSG00000125484|ENST00000372146|GTF3C4	REV__ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3006896972656	2	494.302927	986.591301	-1.6335	-0.00080746	-2.893	-0.00143	-4.5265	-0.0022375	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.86288	1	9980	9980		26.796	1.3459	1	46933000	+		57060	18646	38152	38168	64571	64571					0.09746941065191095
TFIRRNKKG	9	Unmodified	_TFIRRNKKG_					0	0	0			REV__nc|ENSG00000011143|Q9NXB0-3|MKS1	REV__nc|ENSG00000011143|Q9NXB0-3|MKS1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3407592773438	2	560.340907	1118.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.56	1	106.6	106.1	107.1	0.03688								0	0	0	0.31117	1	11673	11673		26.693	1.2427	1		+		57061	16178	38153	38169	64572	64572					0.11267337965296065
TFISLLTVRFA	11	Unmodified	_TFISLLTVRFA_					0	0	0			REV__ENST00000550224.5_1_12:57137757-57139879:-|nuORF	REV__ENST00000550224.5_1_12:57137757-57139879:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.376708984375	2	634.374081	1266.73361	1.3188	0.00083664	3.8961	0.0024716	5.215	0.0033083	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.76322	1	13156	13156		19.104	0.84144	1	12917000	+		57062	28594	38154	38170	64573	64573					0.11091109016706469
TFITKVLLGQ	10	Unmodified	_TFITKVLLGQ_					0	0	0		nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;ENSG00000111077|ENST00000314250|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;ENST00000552168.1_1_12:53456565-53457663:+|nuORF	nc|ENSG00000111077|Q63HR2-2|TNS2	nc|ENSG00000111077|Q63HR2-2|TNS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3402709960938	2	560.342249	1118.66995	0.39664	0.00022225	-3.4771	-0.0019484	-3.0805	-0.0017261	560.3401597045467	105.5	0.96318	105.66	104.96	105.92	0.15924					88	24	4	0	0	0	0.85981	1	11170	11170		35.152	1.2304	1	1617200			57063	2559	38155	38171	64574	64574					0.11535748579603933
TFKCPNKGT	9	Unmodified	_TFKCPNKGT_					0	0	0			REV__ENSG00000160229|ENST00000344519|ZNF66	REV__ENSG00000160229|ENST00000344519|ZNF66	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.2498474121094	2	498.252577	994.490601	0.65421	0.00032596	-4.1469	-0.0020662	-3.4927	-0.0017402	498.2504762789299	84.278	2.5465	84.426	83.483	86.029	0.14793					110	58	2	0	0	0	0.66686	1	8137	8137		42.864	4.0581	1	137980	+		57064	20707	38156	38172	64575	64575					-0.006864589799761234
TFKCPNKGT	9	Unmodified	_TFKCPNKGT_					0	0	0			REV__ENSG00000160229|ENST00000344519|ZNF66	REV__ENSG00000160229|ENST00000344519|ZNF66	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	498.252577	994.490601	-0.069747	-3.4752E-05	-3.6845	-0.0018358	-3.7543	-0.0018706	498.25088875748816	84.603	2.5601	84.67	83.598	86.158	0.067169	0.12386	0.00024453	NaN	42.864	118	58	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104900	+		57065	20707	38156	38172							-0.006864589799761234
TFKCPNKGT	9	Unmodified	_TFKCPNKGT_					0	0	0			REV__ENSG00000160229|ENST00000344519|ZNF66	REV__ENSG00000160229|ENST00000344519|ZNF66	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	498.252577	994.490601	-0.71861	-0.00035805	-3.4471	-0.0017175	-4.1657	-0.0020756	498.25118207932167	84.335	2.5682	84.394	83.41	85.978	0.05925	-0.15183	0.00048113	NaN	42.864	126	58	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103510	+		57066	20707	38156	38172							-0.006864589799761234
TFKCPNKGT	9	Unmodified	_TFKCPNKGT_					0	0	0			REV__ENSG00000160229|ENST00000344519|ZNF66	REV__ENSG00000160229|ENST00000344519|ZNF66	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	498.252577	994.490601	0.65421	0.00032596	-4.1469	-0.0020662	-3.4927	-0.0017402	498.2504762789299	84.278	2.5465	84.426	83.483	86.029	0.14793	-0.1203	-0.00021622	NaN	42.864	110	58	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137980	+		57067	20707	38156	38172							-0.006864589799761234
TFKDVAMDF	9	Unmodified	_TFKDVAMDF_					0	0	0		ENST00000578258.5_1_17:15604467-15614659:+|nuORF;ENST00000585171.5_1_17:15603407-15638248:+|nuORF;nc|ENSG00000187607|Q9HBT8-2|ZNF286A;ENSG00000187607|ENST00000583566|ZNF286A	ENST00000578258.5_1_17:15604467-15614659:+|nuORF	ENST00000578258.5_1_17:15604467-15614659:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	536.8270874023438	2	537.252243	1072.48993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.854	1	56.842	56.342	57.342	-0.012203								0	0	0	0.30053	1	5111	5111		30.504	1.3541	1				57068	7863	38157	38173	64576	64576					-0.04341298419717532
TFKGLTGKSIH	11	Unmodified	_TFKGLTGKSIH_					0	0	0			REV__nc|ENSG00000196419|P12956-2|XRCC6	REV__nc|ENSG00000196419|P12956-2|XRCC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	594.8377685546875	2	594.840405	1187.66626	-1.8463	-0.0010983	-2.1096	-0.0012549	-3.9559	-0.0023531	594.8391183402547	69.554	0.6607	69.59	69.382	70.042	0.035614					50	33	2	0	0	0	0.72106	1	6658	6658		28.081	2.5074	1	1808800	+		57069	23127	38158	38174	64577	64577					0.07993078805770892
TFKKEFFKKRL	11	Unmodified	_TFKKEFFKKRL_					0	0	0			REV__nc|ENSG00000105982|Q9H0A6-2|RNF32	REV__nc|ENSG00000105982|Q9H0A6-2|RNF32	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.6338806152344	3	491.297645	1470.87111	-0.76351	-0.00037511	3.8386	0.0018859	3.0751	0.0015108	491.299380120772	107.02	1.3868	107.02	106.1	107.48	0					72	31	3	0	0	0	0.81219	1	11086	11086		8.7993	0.39205	1	567610	+		57070	17588	38159	38175	64578	64578					0.15450437616118506
TFKKEFFKKRL	11	Unmodified	_TFKKEFFKKRL_					0	0	0			REV__nc|ENSG00000105982|Q9H0A6-2|RNF32	REV__nc|ENSG00000105982|Q9H0A6-2|RNF32	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.6327209472656	3	491.297645	1470.87111	-0.62705	-0.00030807	3.2135	0.0015788	2.5865	0.0012707	491.2990736869804	110.17	1.4737	110.28	110.04	111.52	0.11659					96	54	2	0	0	0	0.76251	1	11945	11945		19.263	5.1767	1	713080	+		57071	17588	38159	38175	64579	64579					0.15450437616118506
TFKKEFFKKRL	11	Unmodified	_TFKKEFFKKRL_					0	0	0			REV__nc|ENSG00000105982|Q9H0A6-2|RNF32	REV__nc|ENSG00000105982|Q9H0A6-2|RNF32	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.29876708984375	3	491.297645	1470.87111	0.7944	0.00039029	1.8491	0.00090844	2.6435	0.0012987	491.29846333999706	107.88	0.47234	107.96	107.54	108.01	0.084412					45	11	6	0	0	0	0.78085	1	11596	11596		15.333	1.2471	1	262750000	+		57072	17588	38159	38175	64580	64580					0.15450437616118506
TFKKEFFKKRL	11	Unmodified	_TFKKEFFKKRL_					0	0	0			REV__nc|ENSG00000105982|Q9H0A6-2|RNF32	REV__nc|ENSG00000105982|Q9H0A6-2|RNF32	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.2979431152344	3	491.297645	1470.87111	0.79409	0.00039014	1.7233	0.00084667	2.5174	0.0012368	491.2983578004565	110.36	1.7546	110.43	110.06	111.81	0.073685					124	58	3	0	0	0	0.80593	2	11921	11921;11982		10.104	0.45776	1	390370	+		57073	17588	38159	38175	64581;64582	64581					0.15450437616118506
TFKLVQKKKK	10	Unmodified	_TFKLVQKKKK_					0	0	0			REV__ENSG00000116251|ENST00000234875|RPL22	REV__ENSG00000116251|ENST00000234875|RPL22	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	624.4954223632812	2	624.41354	1246.81253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.041	1	53.089	52.589	53.589	0.047802								0	0	0	0.45132	1	4314	4314		24.519	5.4157	1		+		57074	18192	38160	38176	64583	64583					0.19899381041636843
TFKMEKLQKI	10	Unmodified	_TFKMEKLQKI_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5816650390625	3	422.581053	1264.72133	2.2204	0.0009383	-0.015319	-6.4736E-06	2.2051	0.00093183	422.58094622121547	97.769	3.2395	97.714	96.802	100.04	-0.055542					208	75	4	0	0	0	0.85441	1	10601	10601		20.837	0.80668	1	525770	+		57075	16877	38161	38177	64584	64584					0.09955749282016768
TFKMLGLFLII	11	Unmodified	_TFKMLGLFLII_					0	0	0		ENST00000454175.1_1_7:99103383-99103446:+|nuORF	ENST00000454175.1_1_7:99103383-99103446:+|nuORF	ENST00000454175.1_1_7:99103383-99103446:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3941650390625	2	648.393428	1294.7723	-1.1411	-0.00073988	-0.51234	-0.0003322	-1.6534	-0.0010721	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75921	1	12387	12387		19.997	1.7347	1	2297700			57076	11940	38162	38178	64585	64585					0.13670698326882302
TFKMSTIIESH	11	Unmodified	_TFKMSTIIESH_					0	0	0			REV__nc|ENSG00000075702|O43379|WDR62	REV__nc|ENSG00000075702|O43379|WDR62	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.24615478515625	3	431.888434	1292.64347	2.4463	0.0010565	0.51021	0.00022035	2.9565	0.0012769	432.2218919378824	98.544	1.2262	98.592	97.496	98.722	0.048157					34	27	2	0	0	0	0.1747	1	10430	10430		34.087	1.0471	1	64806	+		57077	16717	38163	38179	64586	64586					0.008856916259674108
TFKPDKIE	8	Unmodified	_TFKPDKIE_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.7688903808594	2	489.26875	976.522947	-1.2028	-0.00058851	-1.682	-0.00082293	-2.8848	-0.0014114	489.26775815572165	40.707	0.50734	40.666	40.383	40.891	-0.04081					25	13	2	0	0	0	0.9283	1	3015	3015		49.442	0	1	315910			57078	5333;15007	38164	38180	64587	64587					0.03374651694662134
TFKPGHARSRS	11	Unmodified	_TFKPGHARSRS_					0	0	0		ENSG00000178385|ENST00000427836|PLEKHM3;nc|ENSG00000178385|Q6ZWE6-2|PLEKHM3;nc|ENSG00000178385|Q6ZWE6-3|PLEKHM3	ENSG00000178385|ENST00000427836|PLEKHM3	ENSG00000178385|ENST00000427836|PLEKHM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3370361328125	2	622.336353	1242.65815	0.74466	0.00046343	-0.51938	-0.00032323	0.22528	0.0001402	622.3359336056161	110.94	1.6886	110.97	110.28	111.96	0.031738					155	57	4	0	0	0	0.71921	1	12161	12161		31.634	6.0602	1	299380			57079	7203	38165	38181	64588	64588					0.04652944608983489
TFKRHLIKPLG	11	Unmodified	_TFKRHLIKPLG_					0	0	0		ENST00000526600.1_1_11:12965683-12965947:+|nuORF	ENST00000526600.1_1_11:12965683-12965947:+|nuORF	ENST00000526600.1_1_11:12965683-12965947:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26788330078125	3	437.274952	1308.80303	0.48	0.00020989	0.85967	0.00037591	1.3397	0.0005858	437.2746263194839	23.474	0.12169	23.475	23.388	23.51	0.0018959					6	5	2	0	0	0	0.17811	1	738	738		14.694	0.60766	1	13748			57080	13262	38166	38182	64589	64589					0.16097612756107083
TFKTRKASA	9	Unmodified	_TFKTRKASA_					0	0	0		nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-5|PCM1;ENSG00000078674|ENST00000325083|PCM1	nc|ENSG00000078674|Q15154-4|PCM1	nc|ENSG00000078674|Q15154-4|PCM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.2911682128906	2	505.293091	1008.57163	-1.5977	-0.00080733	-1.6153	-0.00081618	-3.213	-0.0016235	505.2922038023598	97.2	2.3775	97.402	96.877	99.255	0.20206					132	54	3	0	0	0	0.69624	1	9960	9960		40.778	7.9657	1	991360			57081	1404	38167	38183	64590	64590					0.06768565054403552
TFKVEKPE	8	Unmodified	_TFKVEKPE_					0	0	0		ENSG00000180185|ENST00000427358|FAHD1;nc|ENSG00000180185|Q6P587-1|FAHD1	ENSG00000180185|ENST00000427358|FAHD1	ENSG00000180185|ENST00000427358|FAHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.260986328125	2	489.26875	976.522947	0.26522	0.00012977	-2.1862	-0.0010696	-1.9209	-0.00093985	489.26753584830016	40.805	0.54317	40.774	40.524	41.067	-0.030987					26	15	2	0	0	0	0.90983	1	2929	2929		42.396	4.5846	1	330550			57082	7317	38168	38184	64591	64591					0.03374651694662134
TFKVLPSER	9	Unmodified	_TFKVLPSER_					0	0	0		ENST00000441560.6_1_14:51099028-51099193:+|nuORF	ENST00000441560.6_1_14:51099028-51099193:+|nuORF	ENST00000441560.6_1_14:51099028-51099193:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.80615234375	2	538.808574	1075.60259	0.058912	3.1742E-05	-3.5667	-0.0019218	-3.5078	-0.00189	538.806607108325	90.57	3.5579	90.787	89.308	92.866	0.21737					211	84	4	0	0	0	0.7932	1	9145	9145		24.519	1.4767	1	874780			57083	11787	38169	38185	64592	64592					0.06781718368665679
TFLAVFLF	8	Unmodified	_TFLAVFLF_					0	0	0			REV__ENST00000531346.1_1_11:120196007-120201221:+|nuORF	REV__ENST00000531346.1_1_11:120196007-120201221:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27728271484375	2	479.275847	956.537141	-0.93682	-0.000449	4.0317	0.0019323	3.0948	0.0014833	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.89457	1	8063	8063		37.028	12.826	1	2046100	+		57084	22450	38170	38186	64593	64593					0.05713348913604932
TFLAVNLMLSY	11	Unmodified	_TFLAVNLMLSY_					0	0	0			REV__ENST00000504509.1_1_4:171195104-171203958:+|nuORF	REV__ENST00000504509.1_1_4:171195104-171203958:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.5605163574219	3	424.561658	1270.66315	-0.25982	-0.00011031	-1.7934	-0.00076139	-2.0532	-0.0008717	424.5609168516135	27.601	1.5742	27.504	27.094	28.669	-0.096945					107	36	4	0	0	0	0.58516	1	1649	1649		45.908	9.5905	1	4915400	+		57085	27861	38171	38187	64594	64594					0.03864067636732216
TFLEKSPNL	9	Unmodified	_TFLEKSPNL_					0	0	0		ENST00000433579.1_1_7:42952135-42964395:-|nuORF	ENST00000433579.1_1_7:42952135-42964395:-|nuORF	ENST00000433579.1_1_7:42952135-42964395:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2504272460938	2	524.787307	1047.56006	1.1681	0.00061303	1.0785	0.00056598	2.2466	0.001179	524.7860117513167	50.773	0.45288	51.525	51.243	51.696	0.75174					26	10	4	0	0	0	0.20789	1	4993	4993		39.253	7.723	1	210960			57086	11686	38172	38188	64595	64595					0.038183232404207956
TFLIVKWLYI	10	Unmodified	_TFLIVKWLYI_					0	0	0		ENST00000306072.9_1_15:89198758-89198920:+|nuORF	ENST00000306072.9_1_15:89198758-89198920:+|nuORF	ENST00000306072.9_1_15:89198758-89198920:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3949584960938	2	648.391742	1294.76893	-1.1411	-0.00073988	2.087	0.0013532	0.94594	0.00061334	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.85694	1	12400	12400		21.96	0.27414	1	2297700			57087	9856	38173	38189	64596	64596					0.13333771544512274
TFLKKVVSEL	10	Unmodified	_TFLKKVVSEL_					0	0	0			REV__ENSG00000203668|ENST00000366553|CHML	REV__ENSG00000203668|ENST00000366553|CHML	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3523559570312	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.85251	2	12853	12656;12853		26.693	3.6504	1	3937500	+		57088	23434	38174	38190	64597;64598	64598					0.12132017751105195
TFLKTSIVAI	10	Unmodified	_TFLKTSIVAI_					0	0	0			REV__nc|ENSG00000180071|Q8IVF6-2|ANKRD18A	REV__nc|ENSG00000180071|Q8IVF6-2|ANKRD18A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8397827148438	2	546.8368	1091.65905	1.265	0.00069175	4.2188	0.002307	5.4838	0.0029987	546.8391051740801	100.87	2.9553	100.91	100.12	103.07	0.046349					237	70	6	0	0	0	0.80179	1	10912	10912		39.253	0.44669	1	39577000	+		57089	22377	38175	38191	64599	64599					0.11688346205346534
TFLKVFHFRKS	11	Unmodified	_TFLKVFHFRKS_					0	0	0			REV__ENST00000367059.3_2_1:207647596-207648195:+|nuORF	REV__ENST00000367059.3_2_1:207647596-207648195:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.9385986328125	3	470.60659	1408.79794	-0.13472	-6.3401E-05	-0.73132	-0.00034416	-0.86604	-0.00040756	470.6061921310363	15.814	0.17548	15.73	15.669	15.844	-0.083363					14	7	3	0	0	0	0.77205	1	87	87		17.167	3.0807	1	71714	+		57090	25545	38176	38192	64600	64600					0.10989308893499583
TFLLLVKG	8	Unmodified	_TFLLLVKG_					0	0	0		nc|ENSG00000099834|Q9HBB8-2|CDHR5;nc|ENSG00000099834|Q9HBB8-4|CDHR5;ENSG00000099834|ENST00000397542|CDHR5	nc|ENSG00000099834|Q9HBB8-2|CDHR5	nc|ENSG00000099834|Q9HBB8-2|CDHR5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	446.2597351074219	2	445.789121	889.56369	1.2823	0.00057162	1.569	0.00069945	2.8513	0.0012711	445.7897545050298	34.174	0.81902	34.479	34.241	35.06	0.30494					26	19	2	0	0	0	0.4196	1	2618	2618		30.504	0	1	144330			57091	1770	38177	38193	64601	64601					0.11449037804948148
TFLLPVPG	8	Unmodified	_TFLLPVPG_					0	0	0		nc|ENSG00000165102|Q68CP4|HGSNAT;ENSG00000165102|ENST00000379644|HGSNAT;ENST00000520678.1_1_8:43037358-43049067:+|nuORF	nc|ENSG00000165102|Q68CP4|HGSNAT	nc|ENSG00000165102|Q68CP4|HGSNAT	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.7522277832031	2	422.252372	842.49019	-1.4662	-0.00061913	2.0643	0.00087164	0.59802	0.00025252	422.2531975123236	76.788	1.4055	76.878	75.614	77.02	0.089363					63	48	2	0	0	0	0.4196	1	7178	7178		33.516	11.813	1	138890			57092	6045	38178	38194	64602	64602					0.06264489362479253
TFLLRGPRRR	10	Unmodified	_TFLLRGPRRR_					0	0	0			REV__ENST00000400596.2_1_13:20134155-20134623:-|nuORF	REV__ENST00000400596.2_1_13:20134155-20134623:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	636.3990478515625	2	636.394005	1270.77346	-0.11445	-7.2836E-05	2.3373	0.0014874	2.2228	0.0014146	636.3937329484951	101.75	1.2384	101.77	101.52	102.76	0.01989					53	29	3	0	0	0	0.85466	1	10908	10908		20.947	1.6843	1	456850	+		57093	26251	38179	38195	64603	64603					0.1489009353063011
TFLLVLIG	8	Unmodified	_TFLLVLIG_					0	0	0			REV__nc|ENSG00000105976|P08581-3|MET	REV__nc|ENSG00000105976|P08581-3|MET	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2633972167969	2	438.283672	874.552791	1.66	0.00072757	-1.1481	-0.00050319	0.51196	0.00022438	438.2833817497981	35.733	0.22456	36.174	35.997	36.222	0.44043					8	5	2	0	0	0	0.4196	1	2749	2749		29.842	0	1	190710	+		57094	17587	38180	38196	64604	64604					0.1104963543066333
TFLNLATAKK	10	Unmodified	_TFLNLATAKK_					0	0	0			REV__ENST00000511422.1_1_5:120125822-120125918:+|nuORF	REV__ENST00000511422.1_1_5:120125822-120125918:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.830078125	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.8545	1	8674	8674		36.447	2.2742	1	2008100	+		57095	27969	38181	38197	64605	64605					0.10094577919790026
TFLRLLSVSA	10	Unmodified	_TFLRLLSVSA_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2;ENST00000477772.1_1_6:33131457-33145620:-|nuORF	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8301391601562	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.80179	2	8613	8613;8673		39.253	1.4413	1	1181400			57096	8425	38182	38198	64606;64607	64606					0.10094577919812764
TFLRLLSVSA	10	Unmodified	_TFLRLLSVSA_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2;ENST00000477772.1_1_6:33131457-33145620:-|nuORF	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.830322265625	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.86272	2	8971	8971;9031		31.53	1.4767	1	3935500			57097	8425	38182	38198	64608;64609	64608					0.10094577919812764
TFLRLLSVSA	10	Unmodified	_TFLRLLSVSA_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2;ENST00000477772.1_1_6:33131457-33145620:-|nuORF	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8297729492188	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.86218	1	9084	9084		32.812	0.061884	1	1489800			57098	8425	38182	38198	64610	64610					0.10094577919812764
TFLRLLSVSA	10	Unmodified	_TFLRLLSVSA_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2;ENST00000477772.1_1_6:33131457-33145620:-|nuORF	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.829833984375	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.86218	3	8917	8917;8929;9190		32.812	4.7309	1	6402500			57099	8425	38182	38198	64611;64612;64613	64611					0.10094577919812764
TFLRLLSVSA	10	Unmodified	_TFLRLLSVSA_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2;ENST00000477772.1_1_6:33131457-33145620:-|nuORF	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8301391601562	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.80179	1	8967	8967		39.253	11.171	1	6029400			57100	8425	38182	38198	64614	64614					0.10094577919812764
TFLRLLSVSA	10	Unmodified	_TFLRLLSVSA_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2;ENST00000477772.1_1_6:33131457-33145620:-|nuORF	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.830078125	2	553.832049	1105.64954	-1.4375	-0.00079614	-2.2177	-0.0012282	-3.6552	-0.0020243	553.8306676314334	88.402	2.9444	88.574	86.702	89.647	0.17234					210	68	5	0	0	0	0.8545	2	8728	8728;8777		36.447	1.0886	1	1728300			57101	8425	38182	38198	64615;64616	64615					0.10094577919812764
TFLRLLSVSA	10	Unmodified	_TFLRLLSVSA_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2;ENST00000477772.1_1_6:33131457-33145620:-|nuORF	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8306884765625	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.86218	1	9135	9135		32.812	2.3088	1	5453100			57102	8425	38182	38198	64617	64617					0.10094577919812764
TFLRLLSVSA	10	Unmodified	_TFLRLLSVSA_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2;ENST00000477772.1_1_6:33131457-33145620:-|nuORF	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.829833984375	2	553.832049	1105.64954	0.37109	0.00020552	-3.8764	-0.0021469	-3.5053	-0.0019414	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.8545	1	10385	10385		36.447	4.4919	1	1786500			57103	8425	38182	38198	64618	64618					0.10094577919812764
TFLRLLSVSA	10	Unmodified	_TFLRLLSVSA_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2;ENST00000477772.1_1_6:33131457-33145620:-|nuORF	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.830078125	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.82886	4	10753	10706;10730;10753;10812		37.812	3.6476	1	5381700			57104	8425	38182	38198	64619;64620;64621;64622	64621					0.10094577919812764
TFLRLLSVSA	10	Unmodified	_TFLRLLSVSA_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2;ENST00000477772.1_1_6:33131457-33145620:-|nuORF	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8300170898438	2	553.832049	1105.64954	-1.2274	-0.00067979	-2.3284	-0.0012895	-3.5558	-0.0019693	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.85981	3	10493	10442;10466;10493		35.152	7.0705	1	1825600			57105	8425	38182	38198	64623;64624;64625	64625					0.10094577919812764
TFLRLLSVSA	10	Unmodified	_TFLRLLSVSA_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2;ENST00000477772.1_1_6:33131457-33145620:-|nuORF	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.830078125	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.86218	2	10805	10805;10840		32.812	7.2496	1	5911200			57106	8425	38182	38198	64626;64627	64626					0.10094577919812764
TFLSINMKNVL	11	Unmodified	_TFLSINMKNVL_					0	0	0		ENSG00000016402|ENST00000316649|IL20RA	ENSG00000016402|ENST00000316649|IL20RA	ENSG00000016402|ENST00000316649|IL20RA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.3593139648438	2	640.357573	1278.70059	1.6035	0.0010268	0.41653	0.00026673	2.02	0.0012935	640.3577368030512	99.407	2.6879	99.454	98.409	101.1	0.047531					162	62	4	0	0	0	0.57736	1	10650	10650		46.457	0	1	584870			57107	827	38183	38199	64628	64628					0.07239158902348208
TFLSINMKNVL	11	Unmodified	_TFLSINMKNVL_					0	0	0		ENSG00000016402|ENST00000316649|IL20RA	ENSG00000016402|ENST00000316649|IL20RA	ENSG00000016402|ENST00000316649|IL20RA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3587036132812	2	640.357573	1278.70059	0.92817	0.00059436	1.0646	0.00068171	1.9928	0.0012761	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.67778	1	10370	10370		35.152	0	1	603720			57108	827	38183	38199	64629	64629					0.07239158902348208
TFLSLLDVMF	10	Unmodified	_TFLSLLDVMF_					0	0	0		ENSG00000181903|ENST00000314259|OR4C6	ENSG00000181903|ENST00000314259|OR4C6	ENSG00000181903|ENST00000314259|OR4C6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	592.3897094726562	2	593.314843	1184.61513	-0.24201	-0.00014359	4.1887	0.0024852	3.9467	0.0023416	593.3142084926222	70.404	1.3604	70.951	70.13	71.49	0.54704					61	34	3	0	0	0	0.37624	1	7855	7855		19.997	0	1	394650			57109	7413	38184	38200	64630	64630					0.030209937167001044
TFLSLLVRN	9	Unmodified	_TFLSLLVRN_					0	0	0			REV__ENSG00000081248|ENST00000362061|CACNA1S	REV__ENSG00000081248|ENST00000362061|CACNA1S	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8169555664062	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.7932	1	9083	9083		23.042	1.0826	1	4208000	+		57110	16822	38185	38201	64631	64631					0.09498308748356976
TFLSLLVRN	9	Unmodified	_TFLSLLVRN_					0	0	0			REV__ENSG00000081248|ENST00000362061|CACNA1S	REV__ENSG00000081248|ENST00000362061|CACNA1S	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.816650390625	2	531.818941	1061.62333	-1.264	-0.00067223	-2.5284	-0.0013447	-3.7925	-0.0020169	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.78058	2	10547	10416;10547		30.504	2.4566	1	4586300	+		57111	16822	38185	38201	64632;64633	64633					0.09498308748356976
TFLTAIVVF	9	Unmodified	_TFLTAIVVF_					0	0	0			REV__ENSG00000187080|ENST00000366480|OR2AK2	REV__ENSG00000187080|ENST00000366480|OR2AK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.75286865234375	2	505.799686	1009.58482	2.2649	0.0011456	1.7322	0.00087614	3.9971	0.0020217	505.8013584456371	98.644	0.36703	99.02	98.741	99.108	0.37679					12	8	2	0	0	0	0.20789	1	11904	11904		18.324	0	1	101830	+		57112	22900	38186	38202	64634	64634					0.08041003113817169
TFNGHKAAI	9	Unmodified	_TFNGHKAAI_					0	0	0		ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.759521484375	2	479.758884	957.503215	-0.80338	-0.00038543	0.21518	0.00010324	-0.5882	-0.00028219	479.75885725511523	75.87	0.74811	76.438	76.142	76.89	0.56836					36	17	3	0	0	0	0.77696	1	8646	8646		31.53	3.2755	1	564170			57113	1122	38187	38203	64635	64635					0.022763204745501753
TFNIEFRKAF	10	Unmodified	_TFNIEFRKAF_					0	0	0		nc|ENSG00000149295|P14416-2|DRD2;ENSG00000149295|ENST00000362072|DRD2;nc|ENSG00000149295|P14416-3|DRD2;nc|ENSG00000151577|P35462-3|DRD3;ENSG00000151577|ENST00000383673|DRD3	nc|ENSG00000149295|P14416-2|DRD2	nc|ENSG00000149295|P14416-2|DRD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	424.3058166503906	3	424.896029	1271.66626	0.16962	7.2073E-05	-3.4627	-0.0014713	-3.2931	-0.0013992	425.2289653201234	38.162	0.33685	38.256	38.087	38.424	0.094322					16	11	2	0	0	0	0.37624	1	2226	2226		14.694	0	1	65474			57114	5016	38188	38204	64636	64636					0.041290788057494865
TFNVEKYE	8	Unmodified	_TFNVEKYE_					0	0	0			REV__ENSG00000088325|ENST00000300403|TPX2	REV__ENSG00000088325|ENST00000300403|TPX2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.8753662109375	2	515.248015	1028.48148	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.751	1	76.751	76.251	77.251	0								0	0	0	0.29703	1	7001	7001		37.159	1.5408	1		+		57115	15770	38189	38205	64637	64637					-0.03162529064661612
TFPIGRIAV	9	Unmodified	_TFPIGRIAV_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.2929382324219	2	487.295102	972.575651	-0.95022	-0.00046304	-3.0573	-0.0014898	-4.0076	-0.0019529	487.2934854308046	90.996	2.8908	91.042	90.474	93.365	0.046448					155	69	4	0	0	0	0.7932	1	9427	9427		24.203	3.2558	1	2321800	+		57116	16824	38190	38206	64638	64638					0.08826654548136048
TFPIGRIAV	9	Unmodified	_TFPIGRIAV_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.2922058105469	2	487.295102	972.575651	-1.6564	-0.00080713	-2.3009	-0.0011212	-3.9572	-0.0019283	487.29386636791077	90.875	2.2933	91.055	90.557	92.85	0.18029					120	54	3	0	0	0	0.77546	1	9114	9114		31.955	2.8053	1	1353600	+		57117	16824	38190	38206	64639	64639					0.08826654548136048
TFPLAHSP	8	Unmodified	_TFPLAHSP_					0	0	0		nc|ENSG00000120071|Q7Z3B3-4|KANSL1;ENST00000576870.5_2_17:44108844-44117263:-|nuORF;nc|ENSG00000120071|Q7Z3B3-2|KANSL1;ENST00000572218.5_2_17:44108844-44117263:-|nuORF;ENSG00000120071|ENST00000432791|KANSL1	nc|ENSG00000120071|Q7Z3B3-4|KANSL1	nc|ENSG00000120071|Q7Z3B3-4|KANSL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3001708984375	2	435.229428	868.444303	-0.1667	-7.2552E-05	0.33052	0.00014385	0.16382	7.1299E-05	435.22960060577424	73.353	0.29674	73.394	73.247	73.544	0.040024					14	11	2	0	0	0	0.4196	1	7009	7009		38.806	1.7777	1	79112			57118	3113	38191	38207	64640	64640					0.0048184418022856335
TFPLAWRN	8	Unmodified	_TFPLAWRN_					0	0	0		nc|ENSG00000183773|Q96NN9-3|AIFM3;ENSG00000183773|ENST00000440238|AIFM3;ENST00000486003.1_1_22:21331981-21333992:+|nuORF;nc|ENSG00000183773|Q96NN9-2|AIFM3	nc|ENSG00000183773|Q96NN9-3|AIFM3	nc|ENSG00000183773|Q96NN9-3|AIFM3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8139953613281	2	502.769252	1003.52395	2.3197	0.0011663	-3.2329	-0.0016254	-0.91319	-0.00045912	502.7668858593047	97.379	0.41814	97.324	97.061	97.479	-0.055542					13	9	2	0	0	0	0.4196	1	10438	10438		33.516	0	1	31209			57119	7559	38192	38208	64641	64641					0.02232910854218062
TFPLLHAPN	9	Unmodified	_TFPLLHAPN_					0	0	0		ENSG00000143669|ENST00000389793|LYST;nc|ENSG00000143669|Q99698-2|LYST;ENST00000489585.5_1_1:235926109-235996891:-|nuORF;nc|ENSG00000143669|Q99698-3|LYST;ENST00000465349.5_1_1:235954948-235996891:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.34466552734375	2	505.276909	1008.53927	0.036777	1.8582E-05	0.1074	5.4267E-05	0.14418	7.2849E-05	505.276822584199	53.551	0.70379	53.965	53.622	54.326	0.4139					34	16	3	0	0	0	0.20789	1	5383	5383		30.504	7.4612	1	262680			57120	4656	38193	38209	64642	64642					0.03533777651421133
TFPLLLLISKR	11	Unmodified	_TFPLLLLISKR_					0	0	0			REV__ENSG00000221909|ENST00000449309|FAM200A	REV__ENSG00000221909|ENST00000449309|FAM200A	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.285400390625	3	434.283224	1299.82784	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.8	1	57.834	57.334	58.334	0.033905								0	0	0	0.56276	1	5275	5275		17.167	1.8293	1		+		57121	23715	38194	38210	64643	64643					0.18992247838832554
TFPLLVPG	8	Unmodified	_TFPLLVPG_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7516784667969	2	422.252372	842.49019	-0.18711	-7.9006E-05	1.8644	0.00078724	1.6773	0.00070824	422.25314012606117	77.234	0.91118	77.287	77.13	78.041	0.052696					59	44	2	0	0	0	0.4196	1	7537	7537		14.664	0	1	262030	+		57122	22442	38195	38211	64644	64644					0.06264489362479253
TFPLPCVVL	9	Unmodified	_TFPLPCVVL_					0	0	0		ENST00000482800.5_1_3:57261911-57301862:+|nuORF;ENSG00000157500|ENST00000288266|APPL1	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	ENST00000482800.5_1_3:57261911-57301862:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.78057861328125	2	494.780439	987.546325	-0.075058	-3.7137E-05	-0.36605	-0.00018111	-0.4411	-0.00021825	494.7801083626478	84.098	2.6315	84.165	82.573	85.204	0.067001					119	60	3	0	0	0	0.77546	1	8311	8311		31.955	4.0726	1	230560			57123	5432	38196	38212	64645	64645					0.052053742076282106
TFPLRINL	8	Unmodified	_TFPLRINL_					0	0	0		nc|ENSG00000085982|Q9NVE5|USP40;ENSG00000085982|ENST00000678225|USP40;nc|ENSG00000085982|Q9NVE5-3|USP40	nc|ENSG00000085982|Q9NVE5|USP40	nc|ENSG00000085982|Q9NVE5|USP40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.2926025390625	2	487.295102	972.575651	-0.95022	-0.00046304	-3.0573	-0.0014898	-4.0076	-0.0019529	487.2934854308046	90.996	2.8908	91.042	90.474	93.365	0.046448					155	69	4	0	0	0	0.86677	1	9450	9450		27.882	1.0861	1	2321800			57124	1547	38197	38213	64646	64646					0.08826654548113311
TFPLRINL	8	Unmodified	_TFPLRINL_					0	0	0		nc|ENSG00000085982|Q9NVE5|USP40;ENSG00000085982|ENST00000678225|USP40;nc|ENSG00000085982|Q9NVE5-3|USP40	nc|ENSG00000085982|Q9NVE5|USP40	nc|ENSG00000085982|Q9NVE5|USP40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.2921447753906	2	487.295102	972.575651	-0.70314	-0.00034264	-3.2434	-0.0015805	-3.9466	-0.0019231	487.29338906256316	90.865	2.6767	91.083	90.551	93.228	0.21736					133	64	3	0	0	0	0.89962	1	9143	9143		38.806	6.8513	1	1731200			57125	1547	38197	38213	64647	64647					0.08826654548113311
TFPLRINL	8	Unmodified	_TFPLRINL_					0	0	0		nc|ENSG00000085982|Q9NVE5|USP40;ENSG00000085982|ENST00000678225|USP40;nc|ENSG00000085982|Q9NVE5-3|USP40	nc|ENSG00000085982|Q9NVE5|USP40	nc|ENSG00000085982|Q9NVE5|USP40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.292724609375	2	487.295102	972.575651	-1.6564	-0.00080713	-2.3009	-0.0011212	-3.9572	-0.0019283	487.29386636791077	90.875	2.2933	91.055	90.557	92.85	0.18029					120	54	3	0	0	0	0.884	1	9077	9077		33.516	0	1	1353600			57126	1547	38197	38213	64648	64648					0.08826654548113311
TFPLRINL	8	Unmodified	_TFPLRINL_					0	0	0		nc|ENSG00000085982|Q9NVE5|USP40;ENSG00000085982|ENST00000678225|USP40;nc|ENSG00000085982|Q9NVE5-3|USP40	nc|ENSG00000085982|Q9NVE5|USP40	nc|ENSG00000085982|Q9NVE5|USP40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.2928161621094	2	487.295102	972.575651	-1.2737	-0.00062065	-2.7867	-0.0013579	-4.0604	-0.0019786	487.2936158611297	90.804	1.4266	91.275	90.816	92.243	0.47068					98	34	4	0	0	0	0.89494	1	10811	10811		37.159	1.5408	1	1668500			57127	1547	38197	38213	64649	64649					0.08826654548113311
TFPSAGMGF	9	Unmodified	_TFPSAGMGF_					0	0	0			REV__nc|ENSG00000244694|Q6ZW05-4|PTCHD4	REV__nc|ENSG00000244694|Q6ZW05-4|PTCHD4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2638854980469	2	457.707471	913.400389	0.58862	0.00026942	-3.4566	-0.0015821	-2.868	-0.0013127	457.7038201786766	81.64	0.2628	81.784	81.543	81.805	0.14352					6	5	2	0	0	0	0.20789	1	7810	7810		23.042	9.2672	1	10335	+		57128	23854	38198	38214	64650	64650					-0.059775083083991376
TFQEALDLY	9	Unmodified	_TFQEALDLY_					0	0	0		nc|ENSG00000075702|O43379|WDR62;ENSG00000075702|ENST00000401500|WDR62	nc|ENSG00000075702|O43379|WDR62	nc|ENSG00000075702|O43379|WDR62	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.7700805664062	2	550.268947	1098.52334	-0.59081	-0.0003251	1.0737	0.00059082	0.48289	0.00026572	550.2693927818814	66.982	0.53371	66.999	66.752	67.285	0.016205					39	23	2	0	0	0	0.6204	1	6301	6301		45.972	1.8554	1	219840			57129	1341	38199	38215	64651	64651					-0.021979733761327225
TFQTVFMQ	8	Oxidation (M)	_TFQTVFM(Oxidation (M))Q_		TFQTVFM(1)Q		TFQTVFM(56)Q	0	0	1			REV__nc|ENSG00000198920|Q2KHM9-2|KIAA0753	REV__nc|ENSG00000198920|Q2KHM9-2|KIAA0753	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.24029541015625	2	509.239135	1016.46372	1.1391	0.00058008	2.0591	0.0010486	3.1982	0.0016287	509.2401143468642	37.417	1.6866	37.903	36.79	38.476	0.48581					87	41	4	0	0	0	0.9295	1	3038	3038		55.504	6.0627	1	2077300	+		57130	23416	38200	38216	64652	64652					-0.043855675911686376
TFRDCHNKV	9	Unmodified	_TFRDCHNKV_					0	0	0		nc|ENSG00000205592|Q7Z5P9-2|MUC19;ENSG00000205592|ENST00000454784|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	nc|ENSG00000205592|Q7Z5P9-2|MUC19	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.2689208984375	2	560.271832	1118.52911	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.967	1	50.975	50.475	51.475	0.0077438								0	0	0	0.29475	1	4370	4370		32.812	4.9302	1				57131	8534	38201	38217	64653	64653					-0.02541153345487146
TFRENNFIKDF	11	Unmodified	_TFRENNFIKDF_					0	0	0		ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2	ENSG00000148219|ENST00000313400|ASTN2	ENSG00000148219|ENST00000313400|ASTN2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	477.64288330078125	3	477.573614	1429.69901	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.294	1	32.266	31.766	32.766	-0.028049								0	0	0	0.56276	1	1506	1506		22.562	4.7284	1				57132	4940	38202	38218	64654	64654					0.001352411379230034
TFRERRLERKR	11	Unmodified	_TFRERRLERKR_					0	0	0			REV__ENSG00000132623|ENST00000378392|ANKEF1	REV__ENSG00000132623|ENST00000378392|ANKEF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3096923828125	3	516.306085	1545.89643	3.6318	0.0018751	3.3395	0.0017242	6.9713	0.0035993	516.3064298140054	104.12	1.541	104.39	103.97	105.51	0.26524					84	37	3	0	0	0	0.81219	1	12766	12766		8.7993	2.0873	1	184260	+		57133	19017	38203	38219	64655	64655					0.14531305191235333
TFRRCPAGEAS	11	Unmodified	_TFRRCPAGEAS_					0	0	0			REV__ENST00000468062.5_1_11:64569539-64570065:-|nuORF	REV__ENST00000468062.5_1_11:64569539-64570065:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.6947021484375	2	597.787847	1193.56114	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.428	1	48.465	47.965	48.965	0.037731								0	0	0	0.56276	1	3689	3689		27.047	1.4733	1		+		57134	27173	38204	38220	64656	64656					-0.027897856623212647
TFRRWHQKRRK	11	Unmodified	_TFRRWHQKRRK_					0	0	0		ENST00000467796.5_1_22:51221718-51237143:+|nuORF;ENST00000480246.1_1_22:51222460-51237143:+|nuORF	ENST00000467796.5_1_22:51221718-51237143:+|nuORF	ENST00000467796.5_1_22:51221718-51237143:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.64453125	3	533.646553	1597.91783	-0.45741	-0.0002441	-2.0127	-0.0010741	-2.4701	-0.0013182	533.6457070461199	58.492	0.55164	58.484	58.187	58.739	-0.0074387					51	22	3	0	0	0	0.81219	1	4986	4986		8.7993	5.588	1	177260			57135	12163	38205	38221	64657	64657					0.14278735010589116
TFRTPLITI	9	Unmodified	_TFRTPLITI_					0	0	0		ENST00000355472.9_1_5:176869404-176869623:+|nuORF	ENST00000355472.9_1_5:176869404-176869623:+|nuORF	ENST00000355472.9_1_5:176869404-176869623:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.31884765625	2	531.321317	1060.62808	-0.6637	-0.00035264	-2.8491	-0.0015138	-3.5128	-0.0018664	531.319555565115	95.322	2.6544	95.322	94.812	97.466	0					162	61	5	0	0	0	0.76419	1	9518	9518		35.152	4.8343	1	1864100			57136	10353	38206	38222	64658	64658					0.10019192891104467
TFRVPAEKFTN	11	Unmodified	_TFRVPAEKFTN_					0	0	0		ENSG00000139985|ENST00000603540|ADAM21;ENST00000529267.2_1_14:70712472-70713909:-|nuORF	ENSG00000139985|ENST00000603540|ADAM21	ENSG00000139985|ENST00000603540|ADAM21	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.23443603515625	3	437.234822	1308.68264	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.42	1	119.37	118.87	119.87	-0.051674								0	0	0	0.56276	1	14139	14139		25.892	3.3121	1				57137	4406	38207	38223	64659	64659					0.040641599718583166
TFSAQTKTK	9	Unmodified	_TFSAQTKTK_					0	0	0		nc|ENSG00000131504|O60610-2|DIAPH1	nc|ENSG00000131504|O60610-2|DIAPH1	nc|ENSG00000131504|O60610-2|DIAPH1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.2913513183594	2	506.277106	1010.53966	2.3803	0.0012051	2.2064	0.0011171	4.5867	0.0023221	506.278164873421	97.39	0.6289	97.334	96.932	97.561	-0.055542					20	14	2	0	0	0	0.20789	1	10447	10447		19.104	0	1	103980			57138	14917	38208	38224	64660	64660					0.03481152580627622
TFSDSSVE	8	Unmodified	_TFSDSSVE_					0	0	0			REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	REV__ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.1973571777344	2	436.187623	870.360692	1.4125	0.00061611	-4.4034	-0.0019207	-2.9909	-0.0013046	436.18568118557056	100.56	0.6443	100.86	100.53	101.17	0.2999					31	15	3	0	0	0	0.4196	1	12139	12139		18.324	0	1	332460	+		57139	21391	38209	38225	64661	64661					-0.07967356778135581
TFSKKLRSFLI	11	Unmodified	_TFSKKLRSFLI_					0	0	0		chr4:103195233-103195920|59|27.8|0.32|6.46|-|1|CENPE,CENPE|1	chr4:103195233-103195920|59|27.8|0.32|6.46|-|1|CENPE,CENPE|1	chr4:103195233-103195920|59|27.8|0.32|6.46|-|1|CENPE,CENPE|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	447.2727355957031	3	447.274729	1338.80236	-1.2893	-0.00057667	-3.0438	-0.0013614	-4.3331	-0.0019381	447.2733463283295	106.78	1.3581	106.93	106.34	107.7	0.14843					147	32	6	0	0	0	0.74405	1	11430	11430		23.378	4.1152	1	31263000			57140	414	38210	38226	64662	64662					0.14650773316429877
TFSKKPKRR	9	Unmodified	_TFSKKPKRR_					0	0	0		ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3570556640625	2	574.356557	1146.69856	2.697	0.001549	-3.8251	-0.002197	-1.1282	-0.00064797	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.76764	1	10822	10822		34.173	2.6427	1	738540			57141	8753	38211	38227	64663	64663					0.13107910999406158
TFSKVLYY	8	Unmodified	_TFSKVLYY_					0	0	0			REV__nc|ENSG00000130821|P48029-4|SLC6A8	REV__nc|ENSG00000130821|P48029-4|SLC6A8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.7723083496094	2	510.773668	1019.53278	-0.64993	-0.00033197	-3.304	-0.0016876	-3.9539	-0.0020196	510.77187525321716	71.61	0.5751	71.651	71.424	71.999	0.040222					48	23	3	0	0	0	0.87479	1	6882	6882		30.504	2.6214	1	203960	+		57142	18913	38212	38228	64664	64664					0.023798397000405203
TFSQMSSLV	9	Unmodified	_TFSQMSSLV_					0	0	0		ENSG00000213799|ENST00000458035|ZNF845;nc|ENSG00000204604|Q5VIY5-2|ZNF468;ENSG00000204604|ENST00000595646|ZNF468;nc|ENSG00000198538|P17035-2|ZNF28;ENSG00000198538|ENST00000457749|ZNF28	ENSG00000213799|ENST00000458035|ZNF845	ENSG00000213799|ENST00000458035|ZNF845	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.24462890625	2	500.244418	998.474282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.215	1	20.286	19.786	20.786	0.071127								0	0	0	0.29796	1	469	469		31.53	1.0262	1				57143	8602	38213	38229	64665	64665					-0.025015849367377996
TFSRISALVI	10	Unmodified	_TFSRISALVI_					0	0	0		ENSG00000198346|ENST00000396403|ZNF813	ENSG00000198346|ENST00000396403|ZNF813	ENSG00000198346|ENST00000396403|ZNF813	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.830078125	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.80179	1	9099	9099		39.253	6.4404	1	6029400			57144	8266	38214	38230	64666	64666					0.10094577919790026
TFSRISALVI	10	Unmodified	_TFSRISALVI_					0	0	0		ENSG00000198346|ENST00000396403|ZNF813	ENSG00000198346|ENST00000396403|ZNF813	ENSG00000198346|ENST00000396403|ZNF813	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8307495117188	2	553.832049	1105.64954	0.84671	0.00046893	-3.7465	-0.0020749	-2.8998	-0.001606	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.64457	1	10788	10788		47.657	5.2612	1	5381700			57145	8266	38214	38230	64667	64667					0.10094577919790026
TFSRKVVVVV	10	Unmodified	_TFSRKVVVVV_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3294067382812	2	567.355691	1132.69683	-1.2033	-0.0006827	-1.3818	-0.00078397	-2.5851	-0.0014667	567.3551605271047	93.448	0.16356	93.518	93.376	93.54	0.069595					6	3	2	0	0	0	0.37624	1	9693	9693		20.947	3.582	1	66390			57146	8635	38215	38231	64668	64668					0.13578857190805138
TFSRLELATP	10	Unmodified	_TFSRLELATP_					0	0	0			REV__ENSG00000164946|ENST00000380880|FREM1	REV__ENSG00000164946|ENST00000380880|FREM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.32958984375	2	567.811313	1133.60807	-1.3943	-0.00079169	-2.6749	-0.0015188	-4.0691	-0.0023105	567.8099343928097	93.07	0.49297	93.262	93.026	93.519	0.19239					13	11	2	0	0	0	0.37624	1	9382	9382		14.137	0	1	98317	+		57147	21133	38216	38232	64669	64669					0.04661397160452907
TFSRVSPSAA	10	Unmodified	_TFSRVSPSAA_					0	0	0		ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.7666931152344	2	511.766906	1021.51926	-0.020769	-1.0629E-05	-0.30074	-0.00015391	-0.32151	-0.00016454	511.76663248275395	31.026	0.44905	30.978	30.726	31.175	-0.047062					19	11	2	0	0	0	0.86802	1	1721	1721		27.047	1.5971	1	25074			57148	1027	38217	38233	64670	64670					0.009359819208043518
TFSTIPCG	8	Unmodified	_TFSTIPCG_					0	0	0			REV__nc|ENSG00000171587|O60469-2|DSCAM	REV__nc|ENSG00000171587|O60469-2|DSCAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1937561035156	2	413.194196	824.37384	0.36856	0.00015229	-1.5039	-0.00062141	-1.1354	-0.00046913	413.19353569569154	84.288	3.3037	84.723	83.664	86.967	0.43538					144	80	2	0	0	0	0.88915	1	9705	9705		35.201	0	1	9340100	+		57149	21753	38218	38234	64671	64671					-0.0453719719973833
TFTELVDKK	9	Unmodified	_TFTELVDKK_					0	0	0			REV__ENSG00000010278|ENST00000009180|CD9	REV__ENSG00000010278|ENST00000009180|CD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.80029296875	2	540.800414	1079.58628	-1.3732	-0.00074265	1.5797	0.00085428	0.20642	0.00011163	540.8010666157255	73.124	0.62915	73.512	73.168	73.797	0.3878					33	15	3	0	0	0	0.12688	3	8204	8179;8204;8216		87.696	28.194	1	1087500	+		57150	16160	38219	38235	64672;64673;64674	64673					0.04966592411892634
TFTELVDKK	9	Unmodified	_TFTELVDKK_					0	0	0			REV__ENSG00000010278|ENST00000009180|CD9	REV__ENSG00000010278|ENST00000009180|CD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.80078125	2	540.800414	1079.58628	-0.34188	-0.00018489	0.62781	0.00033952	0.28593	0.00015463	540.8005392456347	72.983	0.65971	73.537	73.191	73.851	0.55386					37	16	3	0	0	0	0.14386	2	8218	8205;8218		84.916	13.538	1	1189500	+		57151	16160	38219	38235	64675;64676	64676					0.04966592411892634
TFTERVKPPGV	11	Unmodified	_TFTERVKPPGV_					0	0	0		nc|ENSG00000101892|Q9UN42-2|ATP1B4;ENSG00000101892|ENST00000218008|ATP1B4	nc|ENSG00000101892|Q9UN42-2|ATP1B4	nc|ENSG00000101892|Q9UN42-2|ATP1B4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	410.8996276855469	3	410.89955	1229.67682	0.70631	0.00029022	1.1738	0.00048231	1.8801	0.00077253	410.89988881916554	22.416	0.7554	22.481	22.212	22.968	0.064745					44	27	3	0	0	0	0.72228	1	673	673		30.569	8.7884	1	35977			57152	1968	38220	38236	64677	64677					0.07117061460166951
TFTGLKLQGSL	11	Unmodified	_TFTGLKLQGSL_					0	0	0		ENSG00000206530|ENST00000393845|CFAP44;nc|ENSG00000206530|Q96MT7-1|CFAP44	ENSG00000206530|ENST00000393845|CFAP44	ENSG00000206530|ENST00000393845|CFAP44	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	583.3336791992188	2	582.834788	1163.65502	-0.40612	-0.0002367	-3.2681	-0.0019048	-3.6742	-0.0021415	582.832911894326	94.456	2.7605	94.456	93.622	96.382	0					111	64	3	0	0	0	0.638	1	9310	9310		40.058	3.6114	1	367730			57153	8559	38221	38237	64678	64678					0.07974256711622729
TFTGNLLIIL	10	Unmodified	_TFTGNLLIIL_					0	0	0		ENSG00000127530|ENST00000641666|OR7C1	ENSG00000127530|ENST00000641666|OR7C1	ENSG00000127530|ENST00000641666|OR7C1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8325805664062	2	552.8368	1103.65905	-0.74602	-0.00041243	-4.1168	-0.0022759	-4.8628	-0.0026884	552.8344221073519	82.073	1.2669	82.073	81.549	82.816	0					61	32	2	0	0	0	0.86802	1	7713	7713		27.047	0.3544	1	174970			57154	3505	38222	38238	64679	64679					0.1113634620535322
TFTIDPRTLN	10	Unmodified	_TFTIDPRTLN_					0	0	0			REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	REV__nc|ENSG00000160323|Q76LX8-3|ADAMTS13	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3424072265625	2	589.31422	1176.61389	0.8145	0.00048	-2.2193	-0.0013079	-1.4048	-0.0008279	589.3124250179294	92.426	0.42502	92.584	92.369	92.794	0.15875					15	9	2	0	0	0	0.37624	1	9368	9368		30.318	5.7985	1	70879	+		57155	20713	38223	38239	64680	64680					0.0326449567214695
TFTKRKRLSA	10	Unmodified	_TFTKRKRLSA_					0	0	0		ENSG00000181333|ENST00000315765|HEPHL1	ENSG00000181333|ENST00000315765|HEPHL1	ENSG00000181333|ENST00000315765|HEPHL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.366455078125	2	604.367121	1206.71969	-0.16845	-0.00010181	-0.046458	-2.8078E-05	-0.21491	-0.00012989	604.3669303033663	107.81	0.85171	107.81	107.02	107.87	0					52	20	4	0	0	0	0.86587	1	11147	11147		29.17	10.067	1	11686000			57156	7382	38224	38240	64681	64681					0.12459876308275852
TFTLPGRRLR	10	Unmodified	_TFTLPGRRLR_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-4|MYH14	REV__nc|ENSG00000105357|Q7Z406-4|MYH14	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24945068359375	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.62	1	113.59	113.09	114.09	-0.024811								0	0	0	0.45132	1	12573	12573		26.063	8.2302	1		+		57157	17528	38225	38241	64682	64682					0.12079296028105091
TFTLPGRRLR	10	Unmodified	_TFTLPGRRLR_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-4|MYH14	REV__nc|ENSG00000105357|Q7Z406-4|MYH14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2467346191406	3	406.247285	1215.72002	5.5965	0.0022736	-0.24909	-0.00010119	5.3474	0.0021724	406.581695337414	111.5	0.49822	111.55	111.24	111.74	0.049095					37	18	3	0	0	0	0.86151	1	13545	13545		15.333	1.8791	1	805300	+		57158	17528	38225	38241	64683	64683					0.12079296028105091
TFTSPVGWG	9	Unmodified	_TFTSPVGWG_					0	0	0			REV__nc|ENSG00000114812|P32241-4|VIPR1	REV__nc|ENSG00000114812|P32241-4|VIPR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.2296142578125	2	476.232168	950.449782	-0.98822	-0.00047062	-2.916	-0.0013887	-3.9042	-0.0018593	476.2306460268229	25.104	0.58154	25.167	24.921	25.503	0.063122					52	26	3	0	0	0	0.69914	1	892	892		40.573	5.3719	1	136020	+		57159	18068	38226	38242	64684	64684					-0.027424770279367294
TFTTAQPPVVD	11	Unmodified	_TFTTAQPPVVD_					0	0	0			REV__nc|ENSG00000161270|O60500-2|NPHS1	REV__nc|ENSG00000161270|O60500-2|NPHS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.309814453125	2	588.300778	1174.587	-1.0041	-0.0005907	-0.69737	-0.00041026	-1.7014	-0.001001	588.2994959216793	47.087	0.16965	48.01	47.871	48.041	0.92315					7	3	3	0	0	0	0.17424	1	4472	4472		53.089	7.1167	1	193910	+		57160	20763	38227	38243	64685	64685					0.006693870609524311
TFTVIFILGKI	11	Unmodified	_TFTVIFILGKI_					0	0	0			REV__ENST00000357066.7_1_19:2072329-2072617:-|nuORF	REV__ENST00000357066.7_1_19:2072329-2072617:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3904418945312	2	626.389199	1250.76385	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.6	1	109.67	109.17	110.17	0.068001								0	0	0	0.56276	1	13317	13317		31.53	5.9558	1		+		57161	25405	38228	38244	64686	64686					0.14849467681915485
TFTVLLGG	8	Unmodified	_TFTVLLGG_					0	0	0		ENSG00000172817|ENST00000310193|CYP7B1	ENSG00000172817|ENST00000310193|CYP7B1	ENSG00000172817|ENST00000310193|CYP7B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.23394775390625	2	404.234179	806.453805	-1.2631	-0.0005106	-2.2404	-0.00090563	-3.5035	-0.0014162	404.2330856183434	82.529	2.4032	82.529	81.258	83.662	0					126	65	3	0	0	0	0.86791	2	7653	7653;7736		28.254	6.5519	1	248830			57162	6796	38229	38245	64687;64688	64687					0.042836124657810615
TFVAILGHN	9	Unmodified	_TFVAILGHN_					0	0	0			REV__ENSG00000066739|ENST00000359933|ATG2B	REV__ENSG00000066739|ENST00000359933|ATG2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.2671813964844	2	486.269084	970.523616	-1.6066	-0.00078124	-2.3049	-0.0011208	-3.9115	-0.0019021	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.78536	1	8641	8641		29.15	0.89528	1	1531500	+		57163	16528	38230	38246	64689	64689					0.0371749113437545
TFVAILGHN	9	Unmodified	_TFVAILGHN_					0	0	0			REV__ENSG00000066739|ENST00000359933|ATG2B	REV__ENSG00000066739|ENST00000359933|ATG2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.2668151855469	2	486.269084	970.523616	-0.74239	-0.000361	-3.432	-0.0016689	-4.1744	-0.0020299	486.2673170980509	86.118	3.9821	86.565	85.471	89.453	0.44736					252	97	4	0	0	0	0.78058	1	10033	10033		30.504	1.3541	1	1474100	+		57164	16528	38230	38246	64690	64690					0.0371749113437545
TFVKDIKPGLK	11	Unmodified	_TFVKDIKPGLK_					0	0	0		ENSG00000139579|ENST00000267023|NABP2	ENSG00000139579|ENST00000267023|NABP2	ENSG00000139579|ENST00000267023|NABP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.837646484375	3	415.923696	1244.74926	0.27185	0.00011307	-2.4476	-0.001018	-2.1758	-0.00090496	415.92331344019175	30.155	0.21833	30.065	29.917	30.135	-0.089546					6	4	2	0	0	0	0.17243	1	1965	1965		22.562	0	1	18312			57165	4380	38231	38247	64691	64691					0.13667395533752824
TFVNILKQL	9	Unmodified	_TFVNILKQL_					0	0	0		ENSG00000156136|ENST00000286648|DCK	ENSG00000156136|ENST00000286648|DCK	ENSG00000156136|ENST00000286648|DCK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3270263671875	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.78058	1	12548	12548		30.504	5.9844	1	4041000			57166	5362	38232	38248	64692	64692					0.10939479408125408
TFVRKNKTLS	10	Unmodified	_TFVRKNKTLS_					0	0	0		ENST00000509182.1_1_5:61688751-61699599:-|nuORF;chr5:62392006-62392171|61|13.59|0.46|4.89|-|ENST00000506390|DIMT1,DIMT1;ENSG00000086189|ENST00000199320|DIMT1	ENST00000509182.1_1_5:61688751-61699599:-|nuORF	ENST00000509182.1_1_5:61688751-61699599:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8560791015625	2	597.35368	1192.69281	2.4166	0.0014436	0.49195	0.00029387	2.9086	0.0017374	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.86718	1	9982	9982		27.882	1.0861	1	8047600			57167	450	38233	38249	64693	64693					0.10416767697097384
TFVRKNKTLS	10	Unmodified	_TFVRKNKTLS_					0	0	0		ENST00000509182.1_1_5:61688751-61699599:-|nuORF;chr5:62392006-62392171|61|13.59|0.46|4.89|-|ENST00000506390|DIMT1,DIMT1;ENSG00000086189|ENST00000199320|DIMT1	ENST00000509182.1_1_5:61688751-61699599:-|nuORF	ENST00000509182.1_1_5:61688751-61699599:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.857177734375	2	597.35368	1192.69281	0.9357	0.00055895	2.5932	0.001549	3.5289	0.002108	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.86348	1	9806	9806		31.53	0	1	19058000			57168	450	38233	38249	64694	64694					0.10416767697097384
TFVTTVTLL	9	Unmodified	_TFVTTVTLL_					0	0	0			REV__nc|ENSG00000118307|Q6TDU7-4|DNAI7	REV__nc|ENSG00000118307|Q6TDU7-4|DNAI7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.795166015625	2	497.794601	993.574648	0.32849	0.00016352	2.1792	0.0010848	2.5077	0.0012483	497.7954109844358	48.391	0.87605	48.429	47.96	48.836	0.037731					54	21	3	0	0	0	0.7932	1	3730	3730		24.203	2.5004	1	407880	+		57169	18302	38234	38250	64695	64695					0.07760395388584129
TFWAAANHR	9	Unmodified	_TFWAAANHR_					0	0	0		ENSG00000197776|ENST00000359332|KLHDC1;ENST00000555704.5_1_14:50159830-50218487:+|nuORF;ENST00000556392.5_1_14:50159826-50218487:+|nuORF	ENSG00000197776|ENST00000359332|KLHDC1	ENSG00000197776|ENST00000359332|KLHDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.2670288085938	2	537.267407	1072.52026	0.81622	0.00043853	-2.2524	-0.0012101	-1.4362	-0.00077162	537.2660704118458	59.178	1.0894	59.147	58.675	59.765	-0.030888					61	30	3	0	0	0	0.64922	1	5514	5514		44.117	6.9577	1	555740			57170	8198	38235	38251	64696	64696					-0.013097589196377157
TFWKARGLAK	10	Unmodified	_TFWKARGLAK_					0	0	0		ENSG00000162571|ENST00000379289|TTLL10;nc|ENSG00000162571|Q6ZVT0-2|TTLL10;nc|ENSG00000162571|Q6ZVT0-3|TTLL10	ENSG00000162571|ENST00000379289|TTLL10	ENSG00000162571|ENST00000379289|TTLL10	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	588.6705322265625	2	589.345658	1176.67676	-0.26364	-0.00015537	-3.1542	-0.0018589	-3.4178	-0.0020143	589.3437700280455	101.91	0.89364	101.91	101.62	102.51	0					35	22	2	0	0	0	0.37624	1	10428	10428		20.947	0	1	127750			57171	5697	38236	38252	64697	64697					0.09549106250847217
TFWKKPSSSSS	11	Unmodified	_TFWKKPSSSSS_					0	0	0		ENSG00000150361|ENST00000377844|KLHL1	ENSG00000150361|ENST00000377844|KLHL1	ENSG00000150361|ENST00000377844|KLHL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3145141601562	2	621.311677	1240.6088	0.63124	0.00039219	2.5401	0.0015782	3.1713	0.0019704	621.3133786370522	68.643	0.50154	68.772	68.523	69.024	0.12838					30	18	3	0	0	0	0.70737	1	6200	6200		30.318	0.76697	1	159260			57172	5062	38237	38253	64698	64698					-0.0018780819048060948
TFYGMSYIY	9	Unmodified	_TFYGMSYIY_					0	0	0			REV__ENST00000454857.5_1_10:119966135-119966366:+|nuORF	REV__ENST00000454857.5_1_10:119966135-119966366:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.7520141601562	2	572.754618	1143.49468	1.1144	0.00063831	-1.5955	-0.00091381	-0.48102	-0.00027551	572.7532402588376	50.965	0.48875	51.717	51.449	51.938	0.75174					27	11	3	0	0	0	0.58151	1	5055	5055		47.916	12.297	1	924300	+		57173	26934	38238	38254	64699	64699					-0.07132414276907184
TFYKQENPN	9	Unmodified	_TFYKQENPN_					0	0	0		nc|ENSG00000189007|Q7Z6V5-2|ADAT2;ENSG00000189007|ENST00000237283|ADAT2	nc|ENSG00000189007|Q7Z6V5-2|ADAT2	nc|ENSG00000189007|Q7Z6V5-2|ADAT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	570.7747802734375	2	570.769645	1139.52474	-0.20834	-0.00011891	2.8366	0.0016191	2.6283	0.0015001	570.7714135024667	59.12	1.8858	59.154	58.468	60.353	0.033905					84	53	2	0	0	0	0.66686	1	5441	5441		42.864	2.0861	1	117990			57174	7980	38239	38255	64700	64700					-0.039443392873636185
TFYRTKWRK	9	Unmodified	_TFYRTKWRK_					0	0	0			REV__nc|ENSG00000197415|Q14D04-2|VEPH1	REV__nc|ENSG00000197415|Q14D04-2|VEPH1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3632202148438	2	643.361839	1284.70913	-0.027444	-1.7657E-05	0.97953	0.00063019	0.95209	0.00061254	643.3636404754889	111.34	0.36411	111.28	111.14	111.5	-0.059937					29	10	4	0	0	0	0.20789	1	12116	12116		24.203	0	1	2248800	+		57175	23228	38240	38256	64701	64701					0.07815893653832973
TGAALSRRV	9	Unmodified	_TGAALSRRV_					0	0	0			REV__ENST00000264595.6_1_4:178363422-178363623:-|nuORF	REV__ENST00000264595.6_1_4:178363422-178363623:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7775573730469	2	465.777608	929.540663	-0.25577	-0.00011913	0.16818	7.8335E-05	-0.08759	-4.0797E-05	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.77244	1	7852	7852		32.812	8.2932	1	451640	+		57176	24472	38241	38257	64702	64702					0.07307411740180214
TGAAPRRP	8	Unmodified	_TGAAPRRP_					0	0	0		ENST00000219476.7_1_16:2122324-2122908:+|nuORF	ENST00000219476.7_1_16:2122324-2122908:+|nuORF	ENST00000219476.7_1_16:2122324-2122908:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.23760986328125	2	413.238119	824.461684	-1.8341	-0.00075793	3.7699	0.0015579	1.9358	0.00079993	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.86288	1	7005	7005		26.796	0	1	2012200			57177	9164	38242	38258	64703	64703					0.04243184505901354
TGAGRPSGWE	10	Unmodified	_TGAGRPSGWE_					0	0	0			REV__ENST00000457235.5_3_7:143078502-143078607:+|nuORF	REV__ENST00000457235.5_3_7:143078502-143078607:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.24102783203125	2	509.241055	1016.46756	-0.71317	-0.00036317	-0.0002488	-1.267E-07	-0.71342	-0.0003633	509.2409670422204	38.376	2.2154	38.718	38.458	40.673	0.34187					95	53	2	0	0	0	0.8545	1	3215	3215		36.447	2.9312	1	937320	+		57178	26964	38243	38259	64704	64704					-0.04001761773088219
TGALYRIGDL	10	Unmodified	_TGALYRIGDL_					0	0	0		ENSG00000168003|ENST00000338663|SLC3A2;nc|ENSG00000168003|P08195-3|SLC3A2;nc|ENSG00000168003|P08195|SLC3A2;nc|ENSG00000168003|P08195-5|SLC3A2;nc|ENSG00000168003|P08195-4|SLC3A2	ENSG00000168003|ENST00000338663|SLC3A2	ENSG00000168003|ENST00000338663|SLC3A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.7991943359375	2	539.798206	1077.58186	-0.55561	-0.00029991	3.4821	0.0018796	2.9265	0.0015797	539.8000768252025	26.693	0.58709	26.517	26.205	26.792	-0.17559					20	12	2	0	0	0	0.86587	1	1489	1489		29.17	2.4771	1	151800			57179	6353	38244	38260	64705	64705					0.046171279889904326
TGAVLGWLM	9	Unmodified	_TGAVLGWLM_					0	0	0		ENSG00000141349|ENST00000269097|G6PC3	ENSG00000141349|ENST00000269097|G6PC3	ENSG00000141349|ENST00000269097|G6PC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2536315917969	2	474.254588	946.494624	-0.47841	-0.00022689	0.52279	0.00024794	0.044379	2.1047E-05	474.2547109107997	22.499	1.1216	21.888	21.633	22.755	-0.6107					48	27	2	0	0	0	0.77546	1	954	954		31.955	3.7006	1	176200			57180	4492	38245	38261	64706	64706					0.019236305137269483
TGCDCEEGEE	10	Unmodified	_TGCDCEEGEE_					0	0	0			REV__ENSG00000134007|ENST00000256389|ADAM20	REV__ENSG00000134007|ENST00000256389|ADAM20	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.1668090820312	2	536.165704	1070.31685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.083	1	26.111	25.611	26.611	0.02817								0	0	0	0.45132	1	974	974		14.865	0.72775	1		+		57181	19109	38246	38262	64707	64707					-0.21549077329086685
TGCFKGSH	8	Unmodified	_TGCFKGSH_					0	0	0			REV__ENST00000253110.15_3_19:10203058-10203178:+|nuORF	REV__ENST00000253110.15_3_19:10203058-10203178:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.2971496582031	2	418.689613	835.364672	0.045888	1.9213E-05	1.6062	0.00067249	1.6521	0.00069171	418.69032192293685	74.896	0.25372	75.46	75.33	75.584	0.56458					8	5	2	0	0	0	0.4196	1	8499	8499		26.796	10.323	1	55624	+		57182	24303	38247	38263	64708	64708					-0.05959545765404073
TGCPLLLRGL	10	Unmodified	_TGCPLLLRGL_					0	0	0		ENST00000395245.8_2_17:27041357-27041657:-|nuORF	ENST00000395245.8_2_17:27041357-27041657:-|nuORF	ENST00000395245.8_2_17:27041357-27041657:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.8060302734375	2	521.807519	1041.60049	-1.2132	-0.00063307	-2.4105	-0.0012578	-3.6237	-0.0018909	521.8061683737074	44.151	0.56921	44.996	44.653	45.222	0.84438					25	13	2	0	0	0	0.77314	1	4079	4079		40.778	1.5253	1	1137200			57183	11088	38248	38264	64709	64709					0.08134966359216378
TGDPDLNHF	9	Unmodified	_TGDPDLNHF_					0	0	0			REV__nc|ENSG00000100503|Q8N4C6-5|NIN	REV__nc|ENSG00000100503|Q8N4C6-5|NIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.22760009765625	2	508.227613	1014.44067	0.32287	0.00016409	-0.44693	-0.00022714	-0.12406	-6.3053E-05	508.2273660195006	29.938	0.79892	29.963	29.615	30.414	0.025013					39	20	3	0	0	0	0.69624	1	1496	1496		40.778	0	1	98491	+		57184	29738	38249	38265	64710	64710					-0.06596870384282738
TGDRLVKVN	9	Unmodified	_TGDRLVKVN_					0	0	0		ENSG00000275832|ENST00000622683|ARHGAP23;nc|ENSG00000275832|Q9P227-2|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2906188964844	2	501.290548	1000.56654	-0.9424	-0.00047241	0.84818	0.00042518	-0.094216	-4.7229E-05	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.71772	1	8364	8364		39.253	5.3312	1	6939200			57185	9007	38250	38266	64711	64711					0.06628261191792717
TGECLEEG	8	Unmodified	_TGECLEEG_					0	0	0		nc|ENSG00000112769|Q16363-2|LAMA4;nc|ENSG00000112769|Q16363|LAMA4;ENSG00000112769|ENST00000230538|LAMA4;ENST00000518842.1_1_6:112510294-112512967:-|nuORF	nc|ENSG00000112769|Q16363-2|LAMA4	nc|ENSG00000112769|Q16363-2|LAMA4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	418.29791259765625	2	419.168376	836.322198	-1.2089	-0.00050675	-2.7229	-0.0011414	-3.9319	-0.0016481	419.1685107785319	68.857	0.17114	68.923	68.773	68.944	0.065506					8	6	2	0	0	0	0.4196	1	6176	6176		30.504	5.0535	1	26231			57186	2679	38251	38267	64712	64712					-0.1025098568429712
TGEKLHECSEC	11	Carbamidomethyl (C)	_TGEKLHEC(Carbamidomethyl (C))SEC_	TGEKLHEC(0.5)SEC(0.5)		TGEKLHEC(0)SEC(0)		0	1	0		nc|ENSG00000090612|Q14587-2|ZNF268;ENST00000536899.6_1_12:133758152-133781113:+|nuORF;ENSG00000090612|ENST00000536435|ZNF268	nc|ENSG00000090612|Q14587-2|ZNF268	nc|ENSG00000090612|Q14587-2|ZNF268	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.5129699707031	3	431.513039	1291.51729	0.51917	0.00022403	-0.3755	-0.00016203	0.14367	6.1996E-05	431.5128497328178	22.436	1.0132	21.825	21.481	22.495	-0.6107					71	25	4	0	0	0	0.56641	1	916	916		47.228	6.1476	2	1955400			57187	1651	38252	38268	64713	64713	22;23				-0.11681182941606494
TGFFLSVVL	9	Unmodified	_TGFFLSVVL_					0	0	0			REV__ENSG00000175398|ENST00000309675|OR10P1	REV__ENSG00000175398|ENST00000309675|OR10P1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.77935791015625	2	491.784036	981.553519	-0.022145	-1.0891E-05	-3.7149	-0.0018269	-3.737	-0.0018378	491.7819409897417	50.275	0.86578	50.723	50.307	51.173	0.44761					50	20	4	0	0	0	0.47272	1	4953	4953		53.351	5.4358	1	1878200	+		57188	22066	38253	38269	64714	64714					0.06200430079729813
TGGCRALKQI	10	Unmodified	_TGGCRALKQI_					0	0	0			REV__AluSp_dup5302|chr2:38354608-38354910:+|2.6741733285471225|0.0021979454790091|10.25|39.0|5|2|sense	REV__AluSp_dup5302|chr2:38354608-38354910:+|2.6741733285471225|0.0021979454790091|10.25|39.0|5|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.7933349609375	2	523.792401	1045.57025	-0.29272	-0.00015332	3.2117	0.0016823	2.919	0.001529	523.7938789083427	18.875	0.79418	18.919	18.774	19.569	0.043749					84	37	3	0	0	0	0.86218	1	380	380		32.812	1.2826	1	396290	+		57189	15389	38254	38270	64715	64715					0.04928607694000675
TGGRGMLLP	9	Unmodified	_TGGRGMLLP_					0	0	0			REV__ENST00000298355.7_1_14:51561813-51561984:-|nuORF	REV__ENST00000298355.7_1_14:51561813-51561984:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.2483825683594	2	451.249837	900.485122	-1.2852	-0.00057995	-0.69752	-0.00031476	-1.9827	-0.00089471	451.2493154558184	65.489	1.09	65.618	64.991	66.081	0.12995					90	51	3	0	0	0	0.78536	1	5823	5823		29.15	0.89528	1	1216500	+		57190	24734	38255	38271	64716	64716					0.0308986222820522
TGGRLRPRPRK	11	Unmodified	_TGGRLRPRPRK_					0	0	0		ENST00000215582.7_1_19:751151-756959:+|nuORF	ENST00000215582.7_1_19:751151-756959:+|nuORF	ENST00000215582.7_1_19:751151-756959:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.51300048828125	3	431.937333	1292.79017	0.71142	0.00030729	1.5181	0.0006557	2.2295	0.00096299	431.93810681368893	22.109	0.26837	21.666	21.54	21.808	-0.44324					8	5	2	0	0	0	0.17289	1	874	874		27.644	8.3812	1	33340			57191	9115	38256	38272	64717	64717					0.15548594416577544
TGGSGQFPVS	10	Unmodified	_TGGSGQFPVS_					0	0	0		ENST00000485844.1_1_13:111532446-111545420:-|nuORF	ENST00000485844.1_1_13:111532446-111545420:-|nuORF	ENST00000485844.1_1_13:111532446-111545420:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	468.7232971191406	2	468.724707	935.43486	-0.27946	-0.00013099	-2.7593	-0.0012934	-3.0388	-0.0014244	468.7234027551395	85.666	1.1864	86.109	85.545	86.731	0.44331					75	28	4	0	0	0	0.70553	1	10000	10000		44.377	3.599	1	844910			57192	12568	38257	38273	64718	64718					-0.03543968895939997
TGGSRTSATDD	11	Unmodified	_TGGSRTSATDD_					0	0	0			REV__ENST00000606455.5_1_2:66670102-66794607:+|nuORF	REV__ENST00000606455.5_1_2:66670102-66794607:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	534.2354736328125	2	534.233624	1066.4527	0.65422	0.0003495	3.0619	0.0016358	3.7161	0.0019853	534.2350805422187	27.362	0.50338	27.39	27.143	27.647	0.028172					52	24	3	0	0	0	0.53361	1	1091	1091		49.536	10.283	1	123070	+		57193	19863	38258	38274	64719	64719					-0.07787298431753698
TGHMKTKV	8	Unmodified	_TGHMKTKV_					0	0	0		ENST00000560148.5_2_15:74501815-74510888:+|nuORF	ENST00000560148.5_2_15:74501815-74510888:+|nuORF	ENST00000560148.5_2_15:74501815-74510888:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.2469787597656	2	451.249837	900.485122	-1.5029	-0.0006782	-0.52106	-0.00023513	-2.024	-0.00091333	451.24948444631724	65.955	1.2112	65.955	65.412	66.623	0					127	65	2	0	0	0	0.84341	1	5831	5831		24.203	1.1603	1	815400			57194	13814	38259	38275	64720	64720					0.0308986222820522
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.1842041015625	2	419.18354	836.352528	-1.7768	-0.00074482	0.59977	0.00025141	-1.1771	-0.0004934	419.184314181715	92.494	1.3307	92.72	92.238	93.569	0.22548					60	31	4	0	0	0	0.884	2	9350	9350;9361		38.806	9.6566	1	811100	+		57195	20074	38260	38276	64721;64722	64721					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.1846923828125	2	419.18354	836.352528	-1.7635	-0.00073924	1.4666	0.00061478	-0.2969	-0.00012446	419.18426250816185	99.934	0.99162	100.15	99.734	100.73	0.21511					55	22	3	0	0	0	0.87479	1	10425	10425		30.504	2.6214	1	335410	+		57196	20074	38260	38276	64723	64723					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.18377685546875	2	419.18354	836.352528	-1.8893	-0.00079195	1.0888	0.00045639	-0.80049	-0.00033555	419.18430198240395	92.613	1.5107	92.805	92.266	93.776	0.19238					65	35	4	0	0	0	0.88915	1	9342	9342		35.201	1.6851	1	829610	+		57197	20074	38260	38276	64724	64724					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.1845397949219	2	419.18354	836.352528	-1.8893	-0.00079194	2.0181	0.00084595	0.12883	5.4003E-05	419.1843404237986	100.11	1.0511	100.28	99.803	100.85	0.172					47	23	3	0	0	0	0.87064	1	10388	10388		29.15	3.6994	1	376750	+		57198	20074	38260	38276	64725	64725					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.18353271484375	2	419.18354	836.352528	0.63595	0.00026658	-0.682	-0.00028588	-0.046049	-1.9303E-05	419.18328969471196	86.477	1.2293	86.92	86.409	87.638	0.44331					73	29	4	0	0	0	0.87064	1	10149	10149		29.15	2.3535	1	2405500	+		57199	20074	38260	38276	64726	64726					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1838684082031	2	419.18354	836.352528	1.7002	0.00071268	-2.2445	-0.00094087	-0.54437	-0.00022819	419.18283597364456	92.161	2.0295	92.608	91.837	93.866	0.44661					131	47	5	0	0	0	0.88915	3	10949	10903;10949;10973		42.474	8.9646	1	2677100	+		57200	20074	38260	38276	64727;64728;64729	64728					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1835021972656	2	419.18354	836.352528	1.8507	0.00077578	-2.2334	-0.00093622	-0.38274	-0.00016044	419.1825078402894	95.161	1.5217	95.589	94.841	96.362	0.42728					64	36	2	0	0	0	0.88915	1	11402	11402		35.201	0	1	611440	+		57201	20074	38260	38276	64730	64730					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1831970214844	2	419.18354	836.352528	1.9633	0.00082297	0.92413	0.00038738	2.8874	0.0012104	419.1827524564729	97.635	2.6772	98.021	96.403	99.08	0.38548					177	64	4	0	0	0	0.884	4	11756	11732;11744;11756;11792		47.916	14.4	1	1008900	+		57202	20074	38260	38276	64731;64732;64733;64734	64733					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1842041015625	2	419.18354	836.352528	2.0844	0.00087374	-2.4773	-0.0010385	-0.39295	-0.00016472	419.1826528067583	100.01	2.1606	100.34	99.379	101.54	0.33294					130	55	5	0	0	0	0.86288	2	12072	12061;12072		33.516	2.5934	1	8540100	+		57203	20074	38260	38276	64735;64736	64736					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.18402099609375	2	419.18354	836.352528	-0.57397	-0.0002406	0.20024	8.3937E-05	-0.37373	-0.00015666	419.1838227050264	86.505	1.1853	86.959	86.534	87.719	0.4543					81	28	5	0	0	0	0.84341	2	10201	10182;10201		30.504	10.507	1	2728000	+		57204	20074	38260	38276	64737;64738	64738					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.18359375	2	419.18354	836.352528	-0.61734	-0.00025878	-0.21773	-9.1271E-05	-0.83507	-0.00035005	419.18379974001596	92.26	1.9431	92.723	91.934	93.877	0.46249					113	45	4	0	0	0	0.87922	2	11026	11026;11039		40.573	2.1133	1	2961200	+		57205	20074	38260	38276	64739;64740	64739					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.183837890625	2	419.18354	836.352528	1.2906	0.000541	1.8069	0.00075742	3.0975	0.0012984	419.18302674583776	97.688	3.0434	98.079	96.039	99.082	0.39065					170	73	4	0	0	0	0.87479	4	11798	11788;11798;11811;11830		53.351	9.2347	1	1212200	+		57206	20074	38260	38276	64741;64742;64743;64744	64742					-0.07219446184240041
TGHSNNAH	8	Unmodified	_TGHSNNAH_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.18414306640625	2	419.18354	836.352528	2.1215	0.00088931	-2.058	-0.00086267	0.063545	2.6637E-05	419.18264095568793	100	1.9591	100.35	99.506	101.46	0.34591					92	48	2	0	0	0	0.89962	3	12121	12110;12121;12156		40.573	12.69	1	9424600	+		57207	20074	38260	38276	64745;64746;64747	64746					-0.07219446184240041
TGILIKGH	8	Unmodified	_TGILIKGH_					0	0	0			REV__ENST00000442770.5_1_7:94989287-95024046:-|nuORF	REV__ENST00000442770.5_1_7:94989287-95024046:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7750244140625	2	419.760895	837.507237	0.20953	8.7951E-05	1.9596	0.00082255	2.1691	0.0009105	419.7623948153718	42.578	0.19324	42.643	42.565	42.758	0.065037					6	4	2	0	0	0	0.4196	1	2878	2878		25.45	0	1	31738	+		57208	17574	38261	38277	64748	64748					0.0819840996828134
TGISITCDCF	10	Unmodified	_TGISITCDCF_					0	0	0			REV__nc|ENSG00000184677|Q9NUA8-2|ZBTB40	REV__nc|ENSG00000184677|Q9NUA8-2|ZBTB40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2294921875	2	530.22791	1058.44127	0.56913	0.00030177	-0.13364	-7.0857E-05	0.43549	0.00023091	530.2276513426623	29.379	0.47168	29.39	29.193	29.665	0.011229					51	23	3	0	0	0	0.86763	1	1235	1235		26.693	0	1	168740	+		57209	22699	38262	38278	64749	64749					-0.0856153505110342
TGIVGYMA	8	Unmodified	_TGIVGYMA_					0	0	0		ENST00000528683.5_1_11:71640101-71701796:+|nuORF;nc|ENSG00000137522|Q9H920-2|RNF121;ENST00000526549.5_1_11:71673326-71707358:+|nuORF;ENSG00000137522|ENST00000361756|RNF121	ENST00000528683.5_1_11:71640101-71701796:+|nuORF	ENST00000528683.5_1_11:71640101-71701796:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2485046386719	2	406.204564	810.394575	-1.1306	-0.00045927	-1.5809	-0.00064215	-2.7115	-0.0011014	406.20368402555306	87.999	0.6486	88.462	88.102	88.75	0.46312					19	15	2	0	0	0	0.4196	1	10408	10408		39.021	10.767	1	88167			57210	4211	38263	38279	64750	64750					-0.0182060682006977
TGKFLKRF	8	Unmodified	_TGKFLKRF_					0	0	0		nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;ENSG00000029363|ENST00000531224|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	nc|ENSG00000029363|Q9NYF8-3|BCLAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.8035583496094	2	498.803094	995.591636	0.020638	1.0294E-05	1.186	0.00059156	1.2066	0.00060186	498.8035202614417	51.725	2.5005	51.723	51.014	53.515	-0.0020447					154	63	4	0	0	0	0.884	1	4441	4441		33.516	0	1	2118300			57211	878	38264	38280	64751	64751					0.09366360785043071
TGKGVRSL	8	Unmodified	_TGKGVRSL_					0	0	0		ENST00000593818.5_3_19:50167869-50168989:-|nuORF	ENST00000593818.5_3_19:50167869-50168989:-|nuORF	ENST00000593818.5_3_19:50167869-50168989:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.9307556152344	2	409.248152	816.481751	0.80015	0.00032746	-0.024759	-1.0132E-05	0.77539	0.00031733	409.24813828237944	28.571	0.55207	28.398	28.122	28.674	-0.17336					17	13	2	0	0	0	0.4196	1	1729	1729		18.262	0	1	53316			57212	14310	38265	38281	64752	64752					0.06616935445845229
TGKKRKRPHVF	11	Unmodified	_TGKKRKRPHVF_					0	0	0		ENSG00000106459|ENST00000393232|NRF1;nc|ENSG00000106459|Q16656-4|NRF1;nc|ENSG00000106459|Q16656-2|NRF1	ENSG00000106459|ENST00000393232|NRF1	ENSG00000106459|ENST00000393232|NRF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.94390869140625	3	451.945717	1352.81532	-1.6861	-0.00076203	-3.8032	-0.0017189	-5.4893	-0.0024809	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.75457	1	4553	4553		21.032	3.1991	1	792670			57213	2297	38266	38282	64753	64753					0.1530264921914295
TGKKRKRPHVF	11	Unmodified	_TGKKRKRPHVF_					0	0	0		ENSG00000106459|ENST00000393232|NRF1;nc|ENSG00000106459|Q16656-4|NRF1;nc|ENSG00000106459|Q16656-2|NRF1	ENSG00000106459|ENST00000393232|NRF1	ENSG00000106459|ENST00000393232|NRF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9439392089844	3	451.945717	1352.81532	-1.2962	-0.0005858	-4.4264	-0.0020005	-5.7226	-0.0025863	451.9435878080157	53.433	2.6728	53.481	51.674	54.347	0.047802					247	89	4	0	0	0	0.75457	1	4388	4388		21.032	1.0018	1	734340			57214	2297	38266	38282	64754	64754					0.1530264921914295
TGKLTLKN	8	Unmodified	_TGKLTLKN_					0	0	0		ENSG00000134760|ENST00000257192|DSG1	ENSG00000134760|ENST00000257192|DSG1	ENSG00000134760|ENST00000257192|DSG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.77191162109375	2	437.77146	873.528367	-1.5883	-0.00069529	1.3765	0.00060259	-0.21176	-9.2702E-05	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.8621	1	2340	2340		26.693	3.6504	1	1227500			57215	3955	38267	38283	64755	64755					0.08654375277126292
TGLCYGSH	8	Unmodified	_TGLCYGSH_					0	0	0			REV__ENST00000585058.1_1_17:29850640-29851216:+|nuORF	REV__ENST00000585058.1_1_17:29850640-29851216:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.19677734375	2	419.18162	836.348688	0.63595	0.00026658	3.8981	0.001634	4.5341	0.0019006	419.18328969471196	86.477	1.2293	86.92	86.409	87.638	0.44331					73	29	4	0	0	0	0.4196	1	10175	10175		31.955	27.97	1	2405500	+		57216	29087	38268	38284	64756	64756					-0.07603252002309091
TGLIIVDVVP	10	Unmodified	_TGLIIVDVVP_					0	0	0			REV__ENST00000359933.5_1_14:96749930-96750203:-|nuORF	REV__ENST00000359933.5_1_14:96749930-96750203:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3165893554688	2	513.3157	1024.61685	-0.0063971	-3.2837E-06	2.3192	0.0011905	2.3128	0.0011872	513.3168980017223	55.245	1.1626	55.238	54.853	56.015	-0.0077057					50	31	3	0	0	0	0.86763	1	4891	4891		26.693	1.2427	1	234670	+		57217	25467	38269	38285	64757	64757					0.10552370796949617
TGLIPFAPS	9	Unmodified	_TGLIPFAPS_					0	0	0			REV__ENSG00000083093|ENST00000261584|PALB2	REV__ENSG00000083093|ENST00000261584|PALB2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.7529602050781	2	451.752736	901.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.875	1	66.005	65.505	66.505	0.12996								0	0	0	0.30416	1	5839	5839		29.15	2.3535	1		+		57218	16846	38270	38286	64758	64758					0.0362328401151899
TGLLPLYV	8	Unmodified	_TGLLPLYV_					0	0	0		nc|ENSG00000244122|Q9HAW7-2|UGT1A7;ENSG00000244122|ENST00000373426|UGT1A7	nc|ENSG00000244122|Q9HAW7-2|UGT1A7	nc|ENSG00000244122|Q9HAW7-2|UGT1A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2598571777344	2	438.265479	874.516405	-0.087987	-3.8562E-05	-3.7772	-0.0016554	-3.8652	-0.001694	438.2637207814046	39.241	0.97984	39.189	38.905	39.885	-0.052727					39	26	2	0	0	0	0.82464	1	2450	2450		21.702	1.2205	1	79258			57219	8819	38271	38287	64759	64759					0.07412758533951092
TGLPDVEL	8	Unmodified	_TGLPDVEL_					0	0	0		ENSG00000128271|ENST00000337539|ADORA2A	ENSG00000128271|ENST00000337539|ADORA2A	ENSG00000128271|ENST00000337539|ADORA2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2280578613281	2	422.226551	842.438549	-0.30034	-0.00012681	3.9543	0.0016696	3.654	0.0015428	422.22807899048587	64.416	1.0603	64.382	64.026	65.086	-0.034248					75	29	3	0	0	0	0.84341	1	6165	6165		24.203	0	1	581950			57220	3534	38272	38288	64760	64760					0.011027008779137759
TGLSNFGK	8	Unmodified	_TGLSNFGK_					0	0	0			REV__ENST00000307114.11_1_6:43595035-43595077:-|nuORF	REV__ENST00000307114.11_1_6:43595035-43595077:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.21954345703125	2	412.21906	822.423567	1.3839	0.00057047	-0.32646	-0.00013457	1.0574	0.00043589	412.2188251361589	34.862	0.90005	35.072	34.769	35.67	0.21003					36	22	2	0	0	0	0.90983	1	2632	2632		42.396	1.8235	1	2508800	+		57221	24838	38273	38289	64761	64761					0.00525253800583414
TGLVREGVRN	10	Unmodified	_TGLVREGVRN_					0	0	0			REV__nc|ENSG00000131480|O75106-2|AOC2	REV__nc|ENSG00000131480|O75106-2|AOC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	551.31103515625	2	550.812179	1099.60981	0.12602	6.9412E-05	1.8469	0.0010173	1.9729	0.0010867	550.8131206656723	43.691	0.61175	43.639	43.35	43.962	-0.052517					22	14	2	0	0	0	0.86802	1	3035	3035		27.047	1.4733	1	263220	+		57222	18955	38274	38290	64762	64762					0.0639845096911813
TGMFRYRGPET	11	Unmodified	_TGMFRYRGPET_					0	0	0			REV__nc|ENSG00000138079|Q07837-2|SLC3A1	REV__nc|ENSG00000138079|Q07837-2|SLC3A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2574157714844	3	438.880162	1313.61866	-1.3488	-0.00059198	-4.0143	-0.0017618	-5.3632	-0.0023538	438.8782481470553	30.456	0.48611	30.484	30.141	30.627	0.028618					15	10	2	0	0	0	0.1747	1	1965	1965		21.78	0	1	39874	+		57223	19436	38275	38291	64763	64763					-0.025609434567513745
TGNSKVANFY	10	Unmodified	_TGNSKVANFY_					0	0	0			REV__ENST00000253861.4_1_7:133749426-133749525:+|nuORF	REV__ENST00000253861.4_1_7:133749426-133749525:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.7737426757812	2	550.772188	1099.52982	-0.62011	-0.00034154	0.22988	0.00012661	-0.39023	-0.00021493	550.7721779787771	66.366	0.79084	66.377	66.169	66.96	0.010452					93	39	3	0	0	0	0.82886	1	6257	6257		37.812	0.65241	1	1489500	+		57224	24307	38276	38292	64764	64764					-0.015960354247454234
TGPACPQLEET	11	Unmodified	_TGPACPQLEET_					0	0	0			REV__ENSG00000105429|ENST00000251268|MEGF8	REV__ENSG00000105429|ENST00000251268|MEGF8	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.2612915039062	2	573.260796	1144.50704	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.881	1	36.892	36.392	37.392	0.011173								0	0	0	0.52627	1	2421	2421		63.426	13.89	1		+		57225	17539	38277	38293	64765	64765					-0.059434226045596006
TGPELDVL	8	Unmodified	_TGPELDVL_					0	0	0			REV__ENST00000489942.1_1_6:3155224-3157697:-|nuORF;REV__ENSG00000104833|ENST00000264071|TUBB4A;REV__CON__ENSEMBL:ENSBTAP00000025008	REV__ENSG00000104833|ENST00000264071|TUBB4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.228271484375	2	422.226551	842.438549	1.7013	0.00071832	1.7764	0.00075006	3.4777	0.0014684	422.2272265521278	56.232	1.4977	56.262	54.891	56.389	0.030838					83	44	2	0	0	0	0.84341	1	5063	5063		24.203	0	1	775700	+	+	57226	27627;17478;15965	38278	38294	64766	64766					0.011027008778910385
TGPELDVL	8	Unmodified	_TGPELDVL_					0	0	0			REV__ENST00000489942.1_1_6:3155224-3157697:-|nuORF;REV__ENSG00000104833|ENST00000264071|TUBB4A;REV__CON__ENSEMBL:ENSBTAP00000025008	REV__ENSG00000104833|ENST00000264071|TUBB4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2281188964844	2	422.226551	842.438549	-0.09321	-3.9356E-05	3.1853	0.0013449	3.0921	0.0013056	422.22779141825134	61.484	1.5469	62.037	61.445	62.992	0.55386					58	39	2	0	0	0	0.84341	1	6562	6562		24.203	1.166	1	212920	+	+	57227	27627;17478;15965	38278	38294	64767	64767					0.011027008778910385
TGPGCTRL	8	Unmodified	_TGPGCTRL_					0	0	0			REV__ENST00000372677.7_1_X:102564842-102565956:-|nuORF	REV__ENST00000372677.7_1_X:102564842-102565956:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.70416259765625	2	402.705263	803.395972	-0.36836	-0.00014834	-3.1279	-0.0012596	-3.4962	-0.0014079	402.70395527880777	25.237	0.74186	25.196	24.803	25.545	-0.041168					28	19	2	0	0	0	0.88915	1	1039	1039		35.201	0	1	52623	+		57228	25726	38279	38295	64768	64768					-0.013589727313274125
TGPIGPFGR	9	Unmodified	_TGPIGPFGR_					0	0	0			REV__ENSG00000187498|ENST00000375820|COL4A1	REV__ENSG00000187498|ENST00000375820|COL4A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.24884033203125	2	451.248152	900.481751	-1.4974	-0.0006757	3.0718	0.0013862	1.5744	0.00071045	451.2494003851712	63.042	1.3844	63.429	62.881	64.266	0.38779					66	31	3	0	0	0	0.78536	1	6765	6765		29.15	0	1	494160	+		57229	22918	38280	38296	64769	64769					0.02752935445857929
TGPIGPFGR	9	Unmodified	_TGPIGPFGR_					0	0	0			REV__ENSG00000187498|ENST00000375820|COL4A1	REV__ENSG00000187498|ENST00000375820|COL4A1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	451.248152	900.481751	-1.4974	-0.0006757	3.0718	0.0013862	1.5744	0.00071045	451.2494003851712	63.042	1.3844	63.429	62.881	64.266	0.38779	-0.046794	0.00058917	NaN	29.15	66	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	494160	+		57230	22918	38280	38296							0.02752935445857929
TGPKKKSH	8	Unmodified	_TGPKKKSH_					0	0	0			REV__ENSG00000159556|ENST00000290759|ISL2	REV__ENSG00000159556|ENST00000290759|ISL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.78778076171875	2	441.761426	881.5083	-1.5048	-0.00066475	0.1555	6.8695E-05	-1.3493	-0.00059605	441.76194733517804	41.829	0.12281	41.833	41.744	41.866	0.0043983					4	2	2	0	0	0	0.4196	1	2762	2762		21.96	3.6355	1	26361	+		57231	20666	38281	38297	64770	64770					0.06280624337182417
TGPPLIKS	8	Unmodified	_TGPPLIKS_					0	0	0		ENSG00000169499|ENST00000617275|PLEKHA2	ENSG00000169499|ENST00000617275|PLEKHA2	ENSG00000169499|ENST00000617275|PLEKHA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2955627441406	2	406.747453	811.480354	0.16598	6.7512E-05	3.4385	0.0013986	3.6044	0.0014661	406.7488747362277	37.707	1.286	37.807	37.313	38.599	0.099277					61	44	2	0	0	0	0.4196	1	2166	2166		10.866	7.1812	1	93633			57232	6498	38282	38298	64771	64771					0.06707301357084816
TGPPQLLIPL	10	Unmodified	_TGPPQLLIPL_					0	0	0		ENST00000336138.3_1_8:143816880-143817129:+|nuORF	ENST00000336138.3_1_8:143816880-143817129:+|nuORF	ENST00000336138.3_1_8:143816880-143817129:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.827392578125	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.80179	1	10905	10905		39.253	5.0803	1	30867000			57233	10168	38283	38299	64772	64772					0.11092077033868009
TGPVLAVIL	9	Unmodified	_TGPVLAVIL_					0	0	0		ENSG00000142949|ENST00000359947|PTPRF;nc|ENSG00000142949|P10586-2|PTPRF	ENSG00000142949|ENST00000359947|PTPRF	ENSG00000142949|ENST00000359947|PTPRF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7879943847656	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.7932	1	3266	3266		19.36	1.0356	1	4170800			57234	4591	38284	38300	64773	64773					0.11308733942325944
TGPWRGLG	8	Unmodified	_TGPWRGLG_					0	0	0		ENST00000206542.8_1_14:20922909-20923149:-|nuORF	ENST00000206542.8_1_14:20922909-20923149:-|nuORF	ENST00000206542.8_1_14:20922909-20923149:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2283020019531	2	422.22722	842.439886	-1.6279	-0.00068734	3.5948	0.0015178	1.9669	0.00083048	422.2286431542634	57.254	2.0219	57.254	56.929	58.951	0					133	84	2	0	0	0	0.87922	1	4928	4928		31.955	3.7006	1	766060			57235	9108	38285	38301	64774	64774					0.01236379757335726
TGQLAMKLL	9	Unmodified	_TGQLAMKLL_					0	0	0			REV__ENST00000418257.1_1_10:91122507-91122987:+|nuORF	REV__ENST00000418257.1_1_10:91122507-91122987:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7904968261719	2	487.788795	973.563038	0.6235	0.00030414	2.5998	0.0012681	3.2233	0.0015723	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.78536	1	7880	7880		29.15	2.3535	1	479320	+		57236	26456	38286	38302	64775	64775					0.0751987509358969
TGRAGPVW	8	Unmodified	_TGRAGPVW_					0	0	0		ENST00000356309.7_1_7:158497458-158497509:-|nuORF	ENST00000356309.7_1_7:158497458-158497509:-|nuORF	ENST00000356309.7_1_7:158497458-158497509:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.22796630859375	2	422.22722	842.439886	-1.0391	-0.00043872	2.9759	0.0012565	1.9369	0.0008178	422.2283416890696	64.395	1.1539	64.425	64.021	65.175	0.030243					96	39	3	0	0	0	0.82658	1	5676	5676		21.96	2.5999	1	492400			57237	10364	38287	38303	64776	64776					0.012363797573129887
TGRAITEP	8	Unmodified	_TGRAITEP_					0	0	0			REV__ENST00000541346.1_1_12:6858974-6859115:-|nuORF	REV__ENST00000541346.1_1_12:6858974-6859115:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.7311706542969	2	422.729792	843.445031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.562	1	61.529	61.029	62.029	-0.033173								0	0	0	0.29508	1	5815	5815		26.693	0	1		+		57238	28483	38288	38304	64777	64777					0.017046388292783377
TGRIAIRALDQ	11	Unmodified	_TGRIAIRALDQ_					0	0	0			REV__ENSG00000203880|ENST00000308824|PCMTD2	REV__ENSG00000203880|ENST00000308824|PCMTD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.2384948730469	3	405.238566	1212.69387	2.8569	0.0011577	1.3807	0.00055952	4.2377	0.0017173	405.2390473180589	103.36	0.5413	103.59	103.42	103.96	0.22556					22	12	2	0	0	0	0.71921	1	12579	12579		28.384	3.2578	1	942410	+		57239	23445	38289	38305	64778	64778					0.09602982065985088
TGRIIPAIW	9	Unmodified	_TGRIIPAIW_					0	0	0		nc|ENSG00000113719|Q969X5-2|ERGIC1;ENSG00000113719|ENST00000393784|ERGIC1	nc|ENSG00000113719|Q969X5-2|ERGIC1	nc|ENSG00000113719|Q969X5-2|ERGIC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8087158203125	2	513.808377	1025.6022	-0.12671	-6.5103E-05	1.3179	0.00067714	1.1912	0.00061204	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.7932	1	4059	4059		24.203	3.2558	1	1731500			57240	2739	38290	38306	64779	64779					0.0904234343945518
TGRIWPGG	8	Unmodified	_TGRIWPGG_					0	0	0			REV__ENST00000481170.1_1_2:220370207-220370552:+|nuORF	REV__ENST00000481170.1_1_2:220370207-220370552:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2283935546875	2	422.22722	842.439886	-1.5227	-0.00064292	3.5197	0.0014861	1.997	0.00084319	422.2286072039903	64.658	1.0335	64.658	64.292	65.325	0					111	47	3	0	0	0	0.7961	1	5653	5653		17.365	0	1	501820	+		57241	27431	38291	38307	64780	64780					0.012363797573243573
TGRIWPGG	8	Unmodified	_TGRIWPGG_					0	0	0			REV__ENST00000481170.1_1_2:220370207-220370552:+|nuORF	REV__ENST00000481170.1_1_2:220370207-220370552:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.22796630859375	2	422.22722	842.439886	-0.032306	-1.364E-05	1.3396	0.00056562	1.3073	0.00055198	422.2276832627875	61.725	1.2193	61.692	61.376	62.595	-0.033173					71	53	2	0	0	0	0.82658	1	5839	5839		21.96	0	1	435140	+		57242	27431	38291	38307	64781	64781					0.012363797573243573
TGRLFKKF	8	Unmodified	_TGRLFKKF_					0	0	0			REV__ENSG00000148290|ENST00000371974|SURF1	REV__ENSG00000148290|ENST00000371974|SURF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.8035888671875	2	498.803094	995.591636	0.36192	0.00018053	0.83184	0.00041492	1.1938	0.00059545	498.8033596820182	51.857	1.6149	51.917	51.457	53.072	0.059719					144	50	4	0	0	0	0.884	1	4150	4150		33.516	6.7195	1	2712200	+		57243	20106	38292	38308	64782	64782					0.09366360785031702
TGRLFKKF	8	Unmodified	_TGRLFKKF_					0	0	0			REV__ENSG00000148290|ENST00000371974|SURF1	REV__ENSG00000148290|ENST00000371974|SURF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.803466796875	2	498.803094	995.591636	-0.34217	-0.00017068	1.5467	0.00077149	1.2045	0.00060082	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.86288	1	4154	4154		26.796	2.5934	1	2538600	+		57244	20106	38292	38308	64783	64783					0.09366360785031702
TGRLFKKF	8	Unmodified	_TGRLFKKF_					0	0	0			REV__ENSG00000148290|ENST00000371974|SURF1	REV__ENSG00000148290|ENST00000371974|SURF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.8033447265625	2	498.803094	995.591636	0.57569	0.00028715	0.65338	0.00032591	1.2291	0.00061306	498.80326110747177	49.369	1.5492	50.214	49.828	51.377	0.84501					106	37	4	0	0	0	0.86288	1	4849	4849		26.796	0	1	6182600	+		57245	20106	38292	38308	64784	64784					0.09366360785031702
TGRPRKKPPTG	11	Unmodified	_TGRPRKKPPTG_					0	0	0		ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8562622070312	2	597.856921	1193.69929	-0.35529	-0.00021242	-0.43374	-0.00025932	-0.78904	-0.00047173	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.62614	2	9087	9016;9087		41.427	3.6151	1	1224100			57246	12274	38293	38309	64785;64786	64786					0.11018705648439209
TGRPRKKPPTG	11	Unmodified	_TGRPRKKPPTG_					0	0	0		ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8563232421875	2	597.856921	1193.69929	-0.32365	-0.0001935	0.21288	0.00012727	-0.11077	-6.6223E-05	598.3588954923197	94.611	4.9065	94.611	93.622	98.528	0					293	115	3	0	0	0	0.57736	1	9519	9519		46.457	5.6786	1	5706300			57247	12274	38293	38309	64787	64787					0.11018705648439209
TGRPRKKPPTG	11	Unmodified	_TGRPRKKPPTG_					0	0	0		ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8558959960938	2	597.856921	1193.69929	-0.56225	-0.00033615	-0.53243	-0.00031831	-1.0947	-0.00065446	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.62614	3	9457	9457;9504;9540		41.427	7.2541	1	2042000			57248	12274	38293	38309	64788;64789;64790	64788					0.11018705648439209
TGRPRKKPPTG	11	Unmodified	_TGRPRKKPPTG_					0	0	0		ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8563232421875	2	597.856921	1193.69929	-0.56163	-0.00033577	-0.46706	-0.00027924	-1.0287	-0.00061501	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.60058	3	9904	9761;9880;9904		44.377	9.2252	1	6282800			57249	12274	38293	38309	64791;64792;64793	64793					0.11018705648439209
TGRPRKKPPTG	11	Unmodified	_TGRPRKKPPTG_					0	0	0		ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8558349609375	2	597.856921	1193.69929	2.1625	0.0012929	-3.3793	-0.0020203	-1.2168	-0.00072745	597.8546696490685	92.423	2.9286	92.359	90.439	93.367	-0.06414					206	70	4	0	0	0	0.66929	4	9774	9655;9728;9774;9787		36.447	8.5645	1	2186000			57250	12274	38293	38309	64794;64795;64796;64797	64796					0.11018705648439209
TGRPRKKPPTG	11	Unmodified	_TGRPRKKPPTG_					0	0	0		ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8561401367188	2	597.856921	1193.69929	-0.4308	-0.00025756	-0.72556	-0.00043378	-1.1564	-0.00069134	597.8562580242035	92.27	2.7665	92.315	90.514	93.28	0.045448					217	66	5	0	0	0	0.66929	1	9607	9607		36.447	2.5251	1	1998300			57251	12274	38293	38309	64798	64798					0.11018705648439209
TGRPRKKPPTG	11	Unmodified	_TGRPRKKPPTG_					0	0	0		ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8555908203125	2	597.856921	1193.69929	-0.43134	-0.00025788	-0.57301	-0.00034258	-1.0043	-0.00060046	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.60058	9	9789	9789;9823;9834;9882;9916;9940;9976;10049;10063		44.377	11.119	1	6857100			57252	12274	38293	38309	64799;64800;64801;64802;64803;64804;64805;64806;64807	64799					0.11018705648439209
TGRPRKKPPTG	11	Unmodified	_TGRPRKKPPTG_					0	0	0		ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8555297851562	2	597.856921	1193.69929	0.93581	0.00055948	-2.1237	-0.0012697	-1.1879	-0.00071018	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.62614	2	9247	9247;9306		41.427	6.2817	1	2638300			57253	12274	38293	38309	64808;64809	64808					0.11018705648439209
TGRPRKKPPTG	11	Unmodified	_TGRPRKKPPTG_					0	0	0		ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8555908203125	2	597.856921	1193.69929	0.8216	0.0004912	-2.0016	-0.0011967	-1.18	-0.00070545	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.53361	3	9338	9338;9362;9387		49.536	10.283	1	2486400			57254	12274	38293	38309	64810;64811;64812	64810					0.11018705648439209
TGRPRKKPPTG	11	Unmodified	_TGRPRKKPPTG_					0	0	0		ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8558959960938	2	597.856921	1193.69929	-1.2963	-0.00077498	0.15024	8.982E-05	-1.146	-0.00068516	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.60058	6	9292	9133;9221;9292;9304;9328;9379		44.377	11.109	1	2401200			57255	12274	38293	38309	64813;64814;64815;64816;64817;64818	64815					0.11018705648439209
TGRPRKKPPTG	11	Unmodified	_TGRPRKKPPTG_					0	0	0		ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	ENST00000472918.5_1_22:26902745-26908398:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.85595703125	2	597.856921	1193.69929	-1.2962	-0.00077492	0.5934	0.00035477	-0.70276	-0.00042015	598.3589924641743	94.317	5.5544	94.515	93.356	98.911	0.19827					368	130	4	0	0	0	0.65746	5	9460	9460;9508;9544;9651;9688		37.812	7.2767	1	9481100			57256	12274	38293	38309	64819;64820;64821;64822;64823	64819					0.11018705648439209
TGRSLHAQPT	10	Unmodified	_TGRSLHAQPT_					0	0	0			REV__ENST00000312989.11_1_11:67165675-67165951:-|nuORF	REV__ENST00000312989.11_1_11:67165675-67165951:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.2769165039062	2	534.283254	1066.55196	-0.53739	-0.00028712	2.1863	0.0011681	1.6489	0.00088096	534.2842102324114	109.09	0.41521	109.09	108.84	109.26	0					33	23	2	0	0	0	0.86763	1	11342	11342		26.693	1.1189	1	831720	+		57257	24919	38294	38310	64824	64824					0.021341890436588073
TGRSLHAQPT	10	Unmodified	_TGRSLHAQPT_					0	0	0			REV__ENST00000312989.11_1_11:67165675-67165951:-|nuORF	REV__ENST00000312989.11_1_11:67165675-67165951:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.2802734375	2	534.283254	1066.55196	3.4466	0.0018415	-1.7365	-0.00092781	1.7101	0.00091366	534.2822751928182	109.15	0.53473	109.12	108.81	109.35	-0.029381					29	21	2	0	0	0	0.8545	1	12112	12112		36.447	5.9431	1	1362200	+		57258	24919	38294	38310	64825	64825					0.021341890436588073
TGRVNSPVFRY	11	Unmodified	_TGRVNSPVFRY_					0	0	0			REV__ENSG00000188991|ENST00000344941|SLC15A5	REV__ENSG00000188991|ENST00000344941|SLC15A5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.5977478027344	3	432.566683	1294.67822	-0.16996	-7.3518E-05	1.5527	0.00067164	1.3827	0.00059812	432.5675155494846	106.57	0.21375	106.54	106.44	106.65	-0.025146					6	4	2	0	0	0	0.17347	1	11566	11566		20.315	0	1	89777	+		57259	23050	38295	38311	64826	64826					0.042666955489494285
TGSDVAKH	8	Unmodified	_TGSDVAKH_					0	0	0		ENSG00000146802|ENST00000312814|TMEM168;nc|ENSG00000146802|Q9H0V1-2|TMEM168	ENSG00000146802|ENST00000312814|TMEM168	ENSG00000146802|ENST00000312814|TMEM168	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.7207336425781	2	407.706317	813.398081	2.6866	0.0010954	-4.1454	-0.0016901	-1.4588	-0.00059476	407.7029998631001	102.18	0.12697	102.44	102.35	102.48	0.26322					4	2	2	0	0	0	0.4196	1	12397	12397		7.1934	0	1	24553			57260	4858	38296	38312	64827	64827					-0.016082207218573785
TGSHFLSG	8	Unmodified	_TGSHFLSG_					0	0	0			REV__nc|ENSG00000042062|Q96MK2-2|RIPOR3	REV__nc|ENSG00000042062|Q96MK2-2|RIPOR3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.21234130859375	2	403.195585	804.376617	2.7527	0.0011099	2.1912	0.0008835	4.944	0.0019934	403.1966866728912	28.878	1.6307	28.859	28.119	29.749	-0.019405					103	50	4	0	0	0	0.4196	1	1514	1514		24.203	0	1	63013	+		57261	16325	38297	38313	64828	64828					-0.03339605750568353
TGSHFLSG	8	Unmodified	_TGSHFLSG_					0	0	0			REV__nc|ENSG00000042062|Q96MK2-2|RIPOR3	REV__nc|ENSG00000042062|Q96MK2-2|RIPOR3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	403.195585	804.376617	-1.9234	-0.0007755	0.74238	0.00029933	-1.181	-0.00047618	403.19518993493034	28.634	0.077625	28.703	28.635	28.713	0.06868	-0.078206	-0.0007349	NaN	24.203	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15836	+		57262	16325	38297	38313							-0.03339605750568353
TGSLAPPTN	9	Unmodified	_TGSLAPPTN_					0	0	0			REV__ENST00000459969.5_1_2:10262865-10264033:+|nuORF	REV__ENST00000459969.5_1_2:10262865-10264033:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	429.2359619140625	2	429.2218	856.429047	-1.5373	-0.00065985	3.1878	0.0013683	1.6504	0.0007084	429.2225439804031	63.569	0.42908	63.569	63.501	63.93	0					23	20	2	0	0	0	0.20789	1	5597	5597		34.173	21.213	1	56131	+		57263	21778	38298	38314	64829	64829					-0.004910674076086252
TGSTYAPI	8	Unmodified	_TGSTYAPI_					0	0	0		nc|ENSG00000174437|P16615-5|ATP2A2;nc|ENSG00000174437|P16615-2|ATP2A2;nc|ENSG00000174437|P16615-3|ATP2A2;nc|ENSG00000174437|P16615-4|ATP2A2;ENSG00000174437|ENST00000539276|ATP2A2;ENST00000550262.1_1_12:110770401-110771957:+|nuORF	nc|ENSG00000174437|P16615-5|ATP2A2	nc|ENSG00000174437|P16615-5|ATP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.2039794921875	2	405.205618	808.396684	-0.0495	-2.0058E-05	-2.1856	-0.00088563	-2.2351	-0.00090569	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.85277	1	7738	7738		25.45	3.7478	1	162370			57264	6932	38299	38315	64830	64830					-0.0151785481062916
TGSVKKKK	8	Unmodified	_TGSVKKKK_					0	0	0			REV__ENSG00000155438|ENST00000285814|NIFK	REV__ENSG00000155438|ENST00000285814|NIFK	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2634582519531	2	438.287277	874.560001	0.15124	6.6285E-05	3.5627	0.0015615	3.7139	0.0016278	438.2875628806412	35.577	0.1566	35.683	35.619	35.776	0.10603					8	5	2	0	0	0	0.4196	1	1905	1905		39.253	0	1	24173	+		57265	20429	38300	38316	64831	64831					0.11770368031091039
TGSVKKKK	8	Unmodified	_TGSVKKKK_					0	0	0			REV__ENSG00000155438|ENST00000285814|NIFK	REV__ENSG00000155438|ENST00000285814|NIFK	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26336669921875	2	438.287277	874.560001	0.043363	1.9006E-05	-3.0145	-0.0013212	-2.9711	-0.0013022	438.2842026146659	35.827	0.21074	35.766	35.646	35.857	-0.060333					8	5	2	0	0	0	0.4196	1	1930	1930		17.365	0	1	50281	+		57266	20429	38300	38316	64832	64832					0.11770368031091039
TGSVKKKK	8	Unmodified	_TGSVKKKK_					0	0	0			REV__ENSG00000155438|ENST00000285814|NIFK	REV__ENSG00000155438|ENST00000285814|NIFK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2633056640625	2	438.287277	874.560001	1.6221	0.00071097	-0.25151	-0.00011024	1.3706	0.00060073	438.2876030422424	35.576	0.38068	35.958	35.635	36.015	0.3812					20	9	3	0	0	0	0.4196	1	2713	2713		26.693	13.881	1	310190	+		57267	20429	38300	38316	64833	64833					0.11770368031091039
TGSVMPNGL	9	Unmodified	_TGSVMPNGL_					0	0	0			REV__ENSG00000077943|ENST00000378076|ITGA8	REV__ENSG00000077943|ENST00000378076|ITGA8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2626037597656	2	438.218203	874.421853	-1.2477	-0.00054678	-2.3257	-0.0010192	-3.5735	-0.001566	438.2170780599487	40.772	0.47965	41.361	41.116	41.596	0.58915					18	13	2	0	0	0	0.20789	1	3553	3553		47.657	13.485	1	474850	+		57268	16755	38301	38317	64834	64834					-0.020381232796808035
TGSYIRMFVLP	11	Unmodified	_TGSYIRMFVLP_					0	0	0			REV__nc|ENSG00000164347|Q969S9-5|GFM2	REV__nc|ENSG00000164347|Q969S9-5|GFM2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.3446044921875	2	642.344466	1282.67438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.171	1	66.298	65.798	66.798	0.12649								0	0	0	0.56276	1	5873	5873		40.778	10.46	1		+		57269	21075	38302	38318	64835	64835					0.04434889730873692
TGTCKKVS	8	Unmodified	_TGTCKKVS_					0	0	0			REV__ENST00000265070.6_1_5:32126678-32126735:-|nuORF	REV__ENST00000265070.6_1_5:32126678-32126735:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.2195739746094	2	412.220746	822.426938	1.3839	0.00057047	-4.4151	-0.00182	-3.0312	-0.0012495	412.2188251361589	34.862	0.90005	35.072	34.769	35.67	0.21003					36	22	2	0	0	0	0.90837	1	2609	2609		56.721	7.185	1	2508800	+		57270	24486	38303	38319	64836	64836					0.00862180582930705
TGTGAGRIP	9	Unmodified	_TGTGAGRIP_					0	0	0			REV__ENST00000373573.7_1_X:71792621-71792867:-|nuORF	REV__ENST00000373573.7_1_X:71792621-71792867:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2302551269531	2	415.229959	828.445365	0.89769	0.00037275	-0.27886	-0.00011579	0.61883	0.00025695	415.2296705852208	25.765	0.99084	25.508	25.087	26.078	-0.2572					42	22	3	0	0	0	0.41566	2	1345	1345;1356		56.721	6.8792	1	309380	+		57271	25765	38304	38320	64837;64838	64837					0.024280585491396778
TGTGAGRIP	9	Unmodified	_TGTGAGRIP_					0	0	0			REV__ENST00000373573.7_1_X:71792621-71792867:-|nuORF	REV__ENST00000373573.7_1_X:71792621-71792867:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.230224609375	2	415.229959	828.445365	2.6688	0.0011082	-1.7713	-0.00073549	0.89752	0.00037268	415.22903609176325	25.746	0.67128	25.315	24.983	25.654	-0.4311					34	15	3	0	0	0	0.19818	1	1365	1365		74.255	5.4682	1	291780	+		57272	25765	38304	38320	64839	64839					0.024280585491396778
TGTGAGRIP	9	Unmodified	_TGTGAGRIP_					0	0	0			REV__ENST00000373573.7_1_X:71792621-71792867:-|nuORF	REV__ENST00000373573.7_1_X:71792621-71792867:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	415.229959	828.445365	0.89769	0.00037275	-0.27886	-0.00011579	0.61883	0.00025695	415.2296705852208	25.765	0.99084	25.508	25.087	26.078	-0.2572	0.09628	0.00048176	NaN	74.255	42	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	309380	+		57273	25765	38304	38320							0.024280585491396778
TGTGAGRIP	9	Unmodified	_TGTGAGRIP_					0	0	0			REV__ENST00000373573.7_1_X:71792621-71792867:-|nuORF	REV__ENST00000373573.7_1_X:71792621-71792867:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	415.229959	828.445365	2.6688	0.0011082	-1.7713	-0.00073549	0.89752	0.00037268	415.22903609176325	25.746	0.67128	25.315	24.983	25.654	-0.4311	-0.09628	-0.00075764	NaN	74.255	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	291780	+		57274	25765	38304	38320							0.024280585491396778
TGTHLVLTVTN	11	Unmodified	_TGTHLVLTVTN_					0	0	0		nc|ENSG00000196588|Q969V6|MRTFA;ENSG00000196588|ENST00000355630|MRTFA	nc|ENSG00000196588|Q969V6|MRTFA	nc|ENSG00000196588|Q969V6|MRTFA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.3203735351562	2	578.322045	1154.62954	-1.36	-0.00078649	-1.1758	-0.00067998	-2.5357	-0.0014665	578.3215937705486	92.438	2.8262	92.624	91.324	94.15	0.18582					174	66	3	0	0	0	0.59499	1	9294	9294		45.022	13.388	1	562630			57275	8078	38305	38321	64840	64840					0.058407821891933054
TGTITIIR	8	Unmodified	_TGTITIIR_					0	0	0			REV__ENST00000447355.1_1_2:136956686-136956818:-|nuORF	REV__ENST00000447355.1_1_2:136956686-136956818:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7708740234375	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.80308	1	2266	2266		16.473	0.83134	1	1041500	+		57276	21150	38306	38322	64841	64841					0.0865437527713766
TGTPKKVK	8	Unmodified	_TGTPKKVK_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	429.2356872558594	2	429.774003	857.533452	-0.17789	-7.6452E-05	2.4255	0.0010424	2.2476	0.00096598	429.7776939919022	63.641	0.30581	63.64	63.485	63.791	-0.00078583					19	13	2	0	0	0	0.4196	1	5923	5923		29.15	0	1	57903	+		57277	17608	38307	38323	64842	64842					0.0989867913975786
TGTRLAPW	8	Unmodified	_TGTRLAPW_					0	0	0		ENSG00000151376|ENST00000524826|ME3;nc|ENSG00000151376|Q16798-2|ME3	ENSG00000151376|ENST00000524826|ME3	ENSG00000151376|ENST00000524826|ME3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.24774169921875	2	451.248152	900.481751	-1.5029	-0.0006782	3.2139	0.0014503	1.711	0.00077208	451.24948444631724	65.955	1.2112	65.955	65.412	66.623	0					127	65	2	0	0	0	0.87064	1	5846	5846		29.15	4.9468	1	815400			57278	5112	38308	38324	64843	64843					0.02752935445857929
TGVHSQTH	8	Unmodified	_TGVHSQTH_					0	0	0		nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;ENSG00000183530|ENST00000327423|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.7094421386719	2	433.709391	865.404229	-0.4049	-0.00017561	0.73237	0.00031764	0.32747	0.00014203	433.7095747053112	18.885	1.2564	18.812	18.502	19.759	-0.073704					78	36	3	0	0	0	0.67263	2	368	352;368		68.485	8.1907	1	1229300			57279	7538	38309	38325	64844;64845	64845					-0.033857024903227284
TGVHSQTHT	9	Unmodified	_TGVHSQTHT_					0	0	0		nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;ENSG00000183530|ENST00000327423|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.2331237792969	2	484.23323	966.451907	-0.2734	-0.00013239	0.39508	0.00019131	0.12168	5.8919E-05	484.23329572733985	22.382	2.0298	22.323	21.638	23.667	-0.058668					149	69	4	0	0	0	0.18601	1	713	713		76.774	7.9873	1	1108400			57280	7538	38310	38326	64846	64846					-0.032660482901405885
TGVHSQTHT	9	Unmodified	_TGVHSQTHT_					0	0	0		nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;ENSG00000183530|ENST00000327423|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.2330322265625	2	484.23323	966.451907	-1.0767	-0.00052137	1.1521	0.00055789	0.075415	3.6518E-05	484.23364192345355	22.339	2.0122	22.281	21.689	23.702	-0.057203					170	78	4	0	0	0	0.18601	1	674	674		76.774	13.468	1	1074300			57281	7538	38310	38326	64847	64847					-0.032660482901405885
TGVHSQTHT	9	Unmodified	_TGVHSQTHT_					0	0	0		nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;ENSG00000183530|ENST00000327423|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2330017089844	2	484.23323	966.451907	0.78986	0.00038248	-0.98339	-0.00047619	-0.19352	-9.371E-05	484.23263862664584	23.199	1.8288	22.781	22.016	23.845	-0.41879					84	42	4	0	0	0	0.15959	2	988	988;1008		82.241	15.811	1	1385900			57282	7538	38310	38326	64848;64849	64848					-0.032660482901405885
TGVHSQTHT	9	Unmodified	_TGVHSQTHT_					0	0	0		nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;ENSG00000183530|ENST00000327423|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	484.23323	966.451907	-0.87458	-0.0004235	1.1111	0.00053804	0.23654	0.00011454	484.233507097456	22.198	1.468	22.246	21.842	23.31	0.048553	0.038367	0.00034046	NaN	76.774	134	74	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	550700			57283	7538	38310	38326							-0.032660482901405885
TGVHSQTHT	9	Unmodified	_TGVHSQTHT_					0	0	0		nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;ENSG00000183530|ENST00000327423|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	484.23323	966.451907	0.077155	3.7361E-05	0.2357	0.00011414	0.31286	0.0001515	484.23312733930663	21.964	0.98618	22.046	21.684	22.67	0.081615	-0.16223	-0.00050735	NaN	76.774	106	50	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	624320			57284	7538	38310	38326							-0.032660482901405885
TGVHSQTHT	9	Unmodified	_TGVHSQTHT_					0	0	0		nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;ENSG00000183530|ENST00000327423|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	nc|ENSG00000183530|Q5THK1-2|PRR14L	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	484.23323	966.451907	0.67587	0.00032728	-0.55329	-0.00026792	0.12258	5.9359E-05	484.2328115360669	22.128	1.0955	22.12	21.804	22.9	-0.0088215	-0.088101	-0.0012715	NaN	76.774	110	56	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	625300			57285	7538	38310	38326							-0.032660482901405885
TGVKGSRK	8	Unmodified	_TGVKGSRK_					0	0	0			REV__ENST00000523631.5_1_8:125506101-125506146:-|nuORF	REV__ENST00000523631.5_1_8:125506101-125506146:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.7553405761719	2	416.753601	831.49265	0.047442	1.9772E-05	3.6834	0.0015351	3.7309	0.0015549	416.7550156148421	65.976	1.6616	66.528	65.948	67.61	0.5526					110	49	3	0	0	0	0.87479	1	7240	7240		30.504	2.6214	1	3875200	+		57286	28143	38311	38327	64850	64850					0.07016337820130047
TGVLFILA	8	Unmodified	_TGVLFILA_					0	0	0			REV__ENSG00000182687|ENST00000329003|GALR2	REV__ENSG00000182687|ENST00000329003|GALR2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.2585754394531	2	417.260197	832.50584	-2.1518	-0.00089787	-1.6828	-0.00070218	-3.8346	-0.0016	417.25934690137603	21.231	2.6146	21.231	20.572	23.187	0					203	120	3	0	0	0	0.86791	1	610	610		28.254	0	1	250530	+		57287	22543	38312	38328	64851	64851					0.08288775879509558
TGVPLDEL	8	Unmodified	_TGVPLDEL_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.22772216796875	2	422.226551	842.438549	0.39883	0.0001684	3.0317	0.0012801	3.4305	0.0014484	422.22774353929225	63.715	1.0414	63.837	63.015	64.056	0.12252					65	43	2	0	0	0	0.84341	1	5585	5585		24.203	0	1	281200	+		57288	21174	38313	38329	64852	64852					0.011027008779137759
TGVSKRGK	8	Unmodified	_TGVSKRGK_					0	0	0			REV__chr12:14803315-14822912|32|18.34|0.42|5.45|+|1|None,C12orf60|1	REV__chr12:14803315-14822912|32|18.34|0.42|5.45|+|1|None,C12orf60|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.7549743652344	2	416.753601	831.49265	0.44827	0.00018682	3.2079	0.0013369	3.6562	0.0015237	416.75482420878427	69.04	0.8387	69.169	68.79	69.629	0.12838					83	36	3	0	0	0	0.8347	1	6225	6225		23.042	0	1	1117600	+		57289	15518	38314	38330	64853	64853					0.07016337820141416
TGWDESQANHF	11	Unmodified	_TGWDESQANHF_					0	0	0		ENSG00000165168|ENST00000378588|CYBB	ENSG00000165168|ENST00000378588|CYBB	ENSG00000165168|ENST00000378588|CYBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	646.2706909179688	2	646.270541	1290.52653	0.27387	0.00017699	-0.29634	-0.00019151	-0.022469	-1.4521E-05	646.2702634390924	50.457	0.90514	50.905	50.599	51.504	0.44761					66	21	5	0	0	0	6.2777E-206	4	4962	4952;4962;4974;4987		268.72	182.86	1	4673600			57290	6054	38315	38331	64854;64855;64856;64857	64855					-0.1071133026946427
TGWDESQANHF	11	Unmodified	_TGWDESQANHF_					0	0	0		ENSG00000165168|ENST00000378588|CYBB	ENSG00000165168|ENST00000378588|CYBB	ENSG00000165168|ENST00000378588|CYBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	646.2713623046875	2	646.270541	1290.52653	2.4543	0.0015861	-2.1713	-0.0014032	0.28301	0.0001829	646.2690290691734	50.268	0.93972	51.113	50.809	51.748	0.84501					65	22	4	0	0	0	3.5977E-206	5	4964	4941;4953;4964;4977;4991		272.66	189.02	1	5285400			57291	6054	38315	38331	64858;64859;64860;64861;64862	64860					-0.1071133026946427
TGWVLEMLEK	10	Oxidation (M)	_TGWVLEM(Oxidation (M))LEK_		TGWVLEM(1)LEK		TGWVLEM(41)LEK	0	0	1			REV__ENSG00000148481|ENST00000277632|MINDY3	REV__ENSG00000148481|ENST00000277632|MINDY3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3157348632812	2	611.312832	1220.61111	-0.40573	-0.00024803	3.6659	0.002241	3.2602	0.001993	611.3149614030243	110.6	0.66887	110.54	110.34	111.01	-0.055084					50	20	3	0	0	0	0.77314	1	12026	12026		40.778	6.8565	1	366430	+		57292	20118	38316	38332	64863	64863		297			0.009629042229562401
THAAAARRRQD	11	Unmodified	_THAAAARRRQD_					0	0	0		ENST00000259241.6_1_2:129076099-129076147:-|nuORF	ENST00000259241.6_1_2:129076099-129076147:-|nuORF	ENST00000259241.6_1_2:129076099-129076147:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3795166015625	2	626.834508	1251.65446	-0.22715	-0.00014239	1.8964	0.0011887	1.6693	0.0010463	626.8361471946827	106.29	0.49376	106.27	105.86	106.35	-0.025146					16	11	2	0	0	0	0.1731	1	11523	11523		35.152	11.629	1	64173			57293	9378	38317	38333	64864	64864					0.03870274835117016
THAGLGQR	8	Unmodified	_THAGLGQR_					0	0	0			REV__ENST00000256996.8_1_11:47260415-47260484:+|nuORF	REV__ENST00000256996.8_1_11:47260415-47260484:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.225341796875	2	420.227751	838.440949	-1.4714	-0.00061832	1.6677	0.00070082	0.19633	8.2505E-05	420.22834377301643	76.819	2.0914	76.909	74.945	77.036	0.089363					112	66	2	0	0	0	0.91977	1	7018	7018		45.952	12.436	1	246920	+		57294	24335	38318	38334	64865	64865					0.015265941262327942
THAGLRKPKLS	11	Unmodified	_THAGLRKPKLS_					0	0	0			REV__ENST00000526240.5_1_11:6416766-6417497:-|nuORF	REV__ENST00000526240.5_1_11:6416766-6417497:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2468566894531	3	403.247173	1206.71969	-0.18602	-7.5014E-05	-0.48244	-0.00019454	-0.66847	-0.00026956	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.7434	1	11443	11443		15.921	0	1	12308000	+		57295	21278	38319	38335	64866	64866					0.12459876308275852
THAKAKNN	8	Unmodified	_THAKAKNN_					0	0	0		ENSG00000100811|ENST00000262238|YY1;ENST00000554579.1_1_14:100742787-100743934:+|nuORF	ENSG00000100811|ENST00000262238|YY1	ENSG00000100811|ENST00000262238|YY1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2411193847656	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.87064	3	7985	7757;7816;7985		30.504	1.2673	1	1094000			57296	1872	38320	38336	64867;64868;64869	64869					0.021228632976999506
THAKNQGLARI	11	Unmodified	_THAKNQGLARI_					0	0	0			REV__nc|ENSG00000142945|Q99661-2|KIF2C	REV__nc|ENSG00000142945|Q99661-2|KIF2C	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8460083007812	2	604.846553	1207.67855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.527	1	96.47	95.97	96.97	-0.056381								0	0	0	0.56276	1	10352	10352		36.447	9.7538	1		+		57297	19762	38321	38337	64870	64870					0.08302115268816124
THAKRVTT	8	Unmodified	_THAKRVTT_					0	0	0		ENST00000583907.1_1_17:26743951-26744507:+|nuORF	ENST00000583907.1_1_17:26743951-26744507:+|nuORF	ENST00000583907.1_1_17:26743951-26744507:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26397705078125	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.90089	1	8302	8302		39.253	7.298	1	4511100			57298	14126	38322	38338	64871	64871					0.054357228488470355
THALMRAIF	9	Unmodified	_THALMRAIF_					0	0	0			REV__nc|ENSG00000125107|A5YKK6-3|CNOT1	REV__nc|ENSG00000125107|A5YKK6-3|CNOT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2933959960938	2	530.292037	1058.56952	-1.5163	-0.00080409	4.08	0.0021636	2.5637	0.0013595	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.62081	1	9181	9181		45.952	8.7928	1	1686700	+		57299	18627	38323	38339	64872	64872					0.042578130449328455
THARSTGPRPV	11	Unmodified	_THARSTGPRPV_					0	0	0		ENSG00000204020|ENST00000404459|LIPN	ENSG00000204020|ENST00000404459|LIPN	ENSG00000204020|ENST00000404459|LIPN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3426513671875	2	589.823078	1177.6316	-1.3226	-0.0007801	0.89603	0.0005285	-0.42656	-0.0002516	589.8233883146295	96.073	2.001	96.276	95.515	97.516	0.20242					61	46	2	0	0	0	0.17415	1	9941	9941		41.427	8.6142	1	63496			57300	8407	38324	38340	64873	64873					0.049892557176463015
THAVAILF	8	Unmodified	_THAVAILF_					0	0	0		ENSG00000111339|ENST00000228936|ART4	ENSG00000111339|ENST00000228936|ART4	ENSG00000111339|ENST00000228936|ART4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7554016113281	2	436.255446	870.496338	0.7369	0.00032147	-1.8909	-0.00082493	-1.154	-0.00050345	436.25447647415183	112.2	0.2012	112.26	112.11	112.31	0.066025					9	6	2	0	0	0	0.93529	1	12088	12088		52.299	7.7681	1	82791			57301	2575	38325	38341	64874	64874					0.05591007593989161
THCRYLSFPD	10	Unmodified	_THCRYLSFPD_					0	0	0			REV__ENST00000485092.5_1_1:17345378-17349237:-|nuORF	REV__ENST00000485092.5_1_1:17345378-17349237:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8698120117188	2	619.784773	1237.55499	1.6858	0.0010448	-4.0706	-0.0025229	-2.3848	-0.001478	619.7819838654277	95.257	0.60288	95.677	95.428	96.03	0.42051					20	14	2	0	0	0	0.37624	1	11377	11377		34.173	0	1	99494	+		57302	18246	38326	38342	64875	64875					-0.054283038938592654
THDILHAII	9	Unmodified	_THDILHAII_					0	0	0		nc|ENSG00000172869|Q9Y485|DMXL1;ENSG00000172869|ENST00000539542|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7926025390625	2	516.795466	1031.57638	-0.27573	-0.0001425	-3.7979	-0.0019627	-4.0736	-0.0021052	516.7933490368572	86.056	2.7275	86.241	84.67	87.398	0.18523					138	63	3	0	0	0	0.76996	1	8444	8444		33.516	1.5607	1	324400			57303	6802	38327	38343	64876	64876					0.06185449197187154
THDSLNRL	8	Unmodified	_THDSLNRL_					0	0	0			REV__nc|ENSG00000102755|P17948-3|FLT1	REV__nc|ENSG00000102755|P17948-3|FLT1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	477.919189453125	2	478.251423	954.488293	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.684	1	30.637	30.137	31.137	-0.047064								0	0	0	0.2939	1	1688	1688		27.882	0	1		+		57304	17351	38328	38344	64877	64877					0.009228286065763314
THEIKKLASE	10	Unmodified	_THEIKKLASE_					0	0	0		ENSG00000164694|ENST00000297267|FNDC1;nc|ENSG00000164694|Q4ZHG4-2|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	ENSG00000164694|ENST00000297267|FNDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3199462890625	2	578.322045	1154.62954	-0.93946	-0.00054331	-1.4962	-0.00086527	-2.4356	-0.0014086	578.3213367494404	92.536	2.9581	92.605	91.391	94.349	0.06987					167	69	3	0	0	0	0.86698	1	9595	9595		28.081	3.5623	1	393420			57305	5993	38329	38345	64878	64878					0.058407821891933054
THEKSKKN	8	Unmodified	_THEKSKKN_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.2669677734375	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.87922	1	8405	8405		31.955	2.8053	1	1702800			57306	5511	38330	38346	64879	64879					0.033154016406683695
THELRLELKKS	11	Unmodified	_THELRLELKKS_					0	0	0			REV__nc|ENSG00000116701|P19878-3|NCF2	REV__nc|ENSG00000116701|P19878-3|NCF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9325256347656	3	451.933143	1352.7776	-0.13839	-6.2545E-05	-0.82875	-0.00037454	-0.96715	-0.00043708	451.93267141602934	99.223	2.3092	99.273	97.79	100.1	0.049828					147	53	3	0	0	0	0.77205	1	10597	10597		17.167	2.3879	1	486010	+		57307	18215	38331	38347	64880	64880					0.11532093442997393
THEVPLSLG	9	Unmodified	_THEVPLSLG_					0	0	0		ENST00000490199.2_1_9:35841173-35846157:+|nuORF;nc|ENSG00000137103|A6NDV4-3|TMEM8B;nc|ENSG00000137103|A6NDV4-2|TMEM8B;nc|ENSG00000137103|A6NDV4|TMEM8B;ENSG00000137103|ENST00000643932|TMEM8B	ENST00000490199.2_1_9:35841173-35846157:+|nuORF	ENST00000490199.2_1_9:35841173-35846157:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.7578125	2	476.758549	951.502546	0.68171	0.00032501	-0.3639	-0.00017349	0.31781	0.00015152	476.75824175786755	24.056	0.67372	24.112	23.761	24.435	0.055487					25	15	2	0	0	0	0.74721	1	832	832		37.159	2.9866	1	95082			57308	12666	38332	38348	64881	64881					0.024854810348756473
THFIPLLLF	9	Unmodified	_THFIPLLLF_					0	0	0		ENSG00000188582|ENST00000340634|PAQR9	ENSG00000188582|ENST00000340634|PAQR9	ENSG00000188582|ENST00000340634|PAQR9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3470458984375	2	550.828778	1099.643	-0.15277	-8.4152E-05	3.1257	0.0017217	2.9729	0.0016375	550.8304607441526	16.81	0.26912	16.322	16.143	16.412	-0.48718					8	5	2	0	0	0	0.20789	1	175	175		17.365	0	1	41990			57309	7938	38333	38349	64882	64882					0.09716684759087002
THFIPLLLF	9	Unmodified	_THFIPLLLF_					0	0	0		ENSG00000188582|ENST00000340634|PAQR9	ENSG00000188582|ENST00000340634|PAQR9	ENSG00000188582|ENST00000340634|PAQR9	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	550.828778	1099.643	0.20589	0.00011341	2.8677	0.0015796	3.0736	0.001693	550.830376564563	16.793	0.16416	16.182	16.095	16.259	-0.6107	-0.070249	-3.8237E-05	NaN	17.365	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55842			57310	7938	38333	38349							0.09716684759087002
THFKHMRGF	9	Unmodified	_THFKHMRGF_					0	0	0		ENST00000460935.1_1_19:12502490-12502811:-|nuORF	ENST00000460935.1_1_19:12502490-12502811:-|nuORF	ENST00000460935.1_1_19:12502490-12502811:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.7899780273438	2	580.792735	1159.57092	-0.42667	-0.00024781	-3.4027	-0.0019762	-3.8293	-0.002224	580.7906128619697	19.702	1.115	19.232	18.974	20.089	-0.46967					60	23	3	0	0	0	0.76764	1	560	560		34.173	5.0025	1	396860			57311	12016	38334	38350	64883	64883					-0.0024855286626461748
THFKLLAAL	9	Unmodified	_THFKLLAAL_					0	0	0			REV__ENST00000593174.5_1_19:13869843-13873879:+|nuORF	REV__ENST00000593174.5_1_19:13869843-13873879:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.3086853027344	2	507.310752	1012.60695	-0.7391	-0.00037496	-3.1206	-0.0015831	-3.8597	-0.0019581	507.3090651329104	28.358	0.65179	28.261	27.974	28.626	-0.096947					38	15	3	0	0	0	0.76764	1	1710	1710		34.173	3.6689	1	309510	+		57312	17491	38335	38351	64884	64884					0.1011522758224146
THFKLRVYT	9	Unmodified	_THFKLRVYT_					0	0	0			REV__ENSG00000050555|ENST00000361069|LAMC3;REV__ENSG00000135862|ENST00000258341|LAMC1	REV__ENSG00000050555|ENST00000361069|LAMC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8330688476562	2	582.82984	1163.64513	2.3168	0.0013503	2.518	0.0014676	4.8348	0.0028179	582.8313275695042	94.548	3.2085	94.489	93.331	96.54	-0.059212					184	75	3	0	0	0	0.78983	1	10004	10004		27.882	0	1	663000	+		57313	16377;19260	38336	38352	64885	64885					0.06985113496921258
THFKLRVYT	9	Unmodified	_THFKLRVYT_					0	0	0			REV__ENSG00000050555|ENST00000361069|LAMC3;REV__ENSG00000135862|ENST00000258341|LAMC1	REV__ENSG00000050555|ENST00000361069|LAMC3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3529052734375	2	582.82984	1163.64513	3.1886	0.0018584	1.4564	0.00084883	4.645	0.0027073	582.8313955564627	105.36	0.21831	105.32	105.23	105.45	-0.04039					7	4	2	0	0	0	0.20789	1	11596	11596		16.473	0	1	33890	+		57314	16377;19260	38336	38352	64886	64886					0.06985113496921258
THFLKAAR	8	Unmodified	_THFLKAAR_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3;ENST00000513232.1_1_5:94857997-94861145:-|nuORF	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2880859375	2	472.277244	942.539935	-1.0554	-0.00049845	-3.3836	-0.001598	-4.439	-0.0020965	472.27717629131524	39.382	0.12597	39.75	39.687	39.813	0.36797					4	2	2	0	0	0	0.4196	1	3296	3296		18.324	0	1	57974			57315	8303	38337	38353	64887	64887					0.06636617091123753
THFSREEP	8	Unmodified	_THFSREEP_					0	0	0			REV__ENST00000568232.1_1_15:74921900-74922221:+|nuORF	REV__ENST00000568232.1_1_15:74921900-74922221:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2928466796875	2	501.735606	1001.45666	-0.81791	-0.00041037	-2.4761	-0.0012423	-3.294	-0.0016527	501.7342872682981	84.497	0.43586	84.932	84.627	85.063	0.43538					17	10	2	0	0	0	0.4196	1	9815	9815		33.516	0	1	113380	+		57316	22332	38338	38354	64888	64888					-0.04401164147373038
THGELKPLVL	10	Unmodified	_THGELKPLVL_					0	0	0			REV__nc|ENSG00000278224|Q2TBC4-2|PRICKLE4	REV__nc|ENSG00000278224|Q2TBC4-2|PRICKLE4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.830078125	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.86348	1	9120	9120		31.53	4.7337	1	1489800	+		57317	18598	38339	38355	64889	64889					0.10094577919812764
THGGKLLPG	9	Unmodified	_THGGKLLPG_					0	0	0			REV__ENST00000358025.7_1_14:64653275-64655278:+|nuORF	REV__ENST00000358025.7_1_14:64653275-64655278:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.2552490234375	2	440.255977	878.497401	-0.6348	-0.00027948	-0.52247	-0.00023002	-1.1573	-0.00050949	440.2554935843261	67.826	1.1159	67.79	67.407	68.523	-0.036293					96	41	3	0	0	0	0.7932	1	6536	6536		23.042	1.0826	1	203860	+		57318	25422	38340	38356	64890	64890					0.053292219629156534
THGGKLLPG	9	Unmodified	_THGGKLLPG_					0	0	0			REV__ENST00000358025.7_1_14:64653275-64655278:+|nuORF	REV__ENST00000358025.7_1_14:64653275-64655278:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.255126953125	2	440.255977	878.497401	0.19593	8.6259E-05	-1.6575	-0.00072971	-1.4615	-0.00064345	440.2551146527056	74.271	0.95056	74.83	74.543	75.493	0.55891					48	22	3	0	0	0	0.7932	1	8403	8403		20.947	2.6225	1	711020	+		57319	25422	38340	38356	64891	64891					0.053292219629156534
THGGKLLPG	9	Unmodified	_THGGKLLPG_					0	0	0			REV__ENST00000358025.7_1_14:64653275-64655278:+|nuORF	REV__ENST00000358025.7_1_14:64653275-64655278:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	440.255977	878.497401	-1.4774	-0.00065042	-0.0087906	-3.8701E-06	-1.4861	-0.00065429	440.2558675859353	67.836	0.7234	67.836	67.4	68.124	0	0.042185	0.00092545	NaN	23.042	37	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92014	+		57320	25422	38340	38356							0.053292219629156534
THGGKLLPG	9	Unmodified	_THGGKLLPG_					0	0	0			REV__ENST00000358025.7_1_14:64653275-64655278:+|nuORF	REV__ENST00000358025.7_1_14:64653275-64655278:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	440.255977	878.497401	-0.6348	-0.00027948	-0.52247	-0.00023002	-1.1573	-0.00050949	440.2554935843261	67.826	1.1159	67.79	67.407	68.523	-0.036293	-0.0040468	0.00047315	NaN	23.042	96	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	203860	+		57321	25422	38340	38356							0.053292219629156534
THGHMGYVF	9	Unmodified	_THGHMGYVF_					0	0	0		ENST00000544307.1_1_12:20725060-20833202:+|nuORF;ENSG00000172572|ENST00000359062|PDE3A	ENST00000544307.1_1_12:20725060-20833202:+|nuORF	ENST00000544307.1_1_12:20725060-20833202:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8267822265625	2	524.737094	1047.45964	-0.13443	-7.0541E-05	3.4456	0.001808	3.3111	0.0017375	525.2407230276949	98.985	0.11937	99.207	99.128	99.247	0.22263					4	2	2	0	0	0	0.20789	1	10289	10289		40.573	0	1	75946			57322	6777	38341	38357	64892	64892					-0.062196122942168586
THGLLVRYR	9	Unmodified	_THGLLVRYR_					0	0	0			REV__ENST00000369502.1_1_1:116574029-116574203:+|nuORF	REV__ENST00000369502.1_1_1:116574029-116574203:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.8309326171875	2	557.827632	1113.64071	1.3464	0.00075106	4.2948	0.0023958	5.6412	0.0031468	557.8300995899048	100.89	1.6699	100.93	100.47	102.14	0.046356					80	39	3	0	0	0	0.7932	1	10855	10855		23.042	0	1	658310	+		57323	20909	38342	38358	64893	64893					0.0884364907399231
THGLRQLRIG	10	Unmodified	_THGLRQLRIG_					0	0	0			REV__ENST00000569119.1_1_16:71881946-71917075:+|nuORF	REV__ENST00000569119.1_1_16:71881946-71917075:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.84326171875	2	575.843813	1149.67307	-0.46596	-0.00026832	-0.81024	-0.00046657	-1.2762	-0.00073489	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.71042	1	9169	9169		44.117	16.235	1	3411000	+		57324	28906	38343	38359	64894	64894					0.10422436476960684
THGLVALFSA	10	Unmodified	_THGLVALFSA_					0	0	0			REV__ENST00000376259.6_1_1:12268232-12268310:+|nuORF	REV__ENST00000376259.6_1_1:12268232-12268310:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.280029296875	2	508.282192	1014.54983	-1.5862	-0.00080625	-2.312	-0.0011752	-3.8982	-0.0019814	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.8608	1	8812	8812		34.173	1.422	1	1814000	+		57325	25834	38344	38360	64895	64895					0.04313760305853975
THGPLTEPT	9	Unmodified	_THGPLTEPT_					0	0	0			REV__ENSG00000095015|ENST00000399503|MAP3K1	REV__ENSG00000095015|ENST00000399503|MAP3K1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.7398376464844	2	476.740357	951.46616	-0.25171	-0.00012	-0.46383	-0.00022113	-0.71554	-0.00034113	476.74000264040296	29.034	0.30008	28.995	28.816	29.116	-0.039907					15	11	2	0	0	0	0.7932	1	1495	1495		23.042	3.939	1	17764	+		57326	17051	38345	38361	64896	64896					-0.011513958618593279
THGRSAAVH	9	Unmodified	_THGRSAAVH_					0	0	0			REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.24658203125	2	468.243932	934.473312	2.4477	0.0011461	-1.337	-0.00062603	1.1107	0.00052009	468.24312652927136	99.164	2.2851	99.111	98.423	100.71	-0.053741					71	52	2	0	0	0	0.62081	1	10705	10705		45.952	0	1	118210	+		57327	20043	38346	38362	64897	64897					0.0034538152922323206
THGRSAAVH	9	Unmodified	_THGRSAAVH_					0	0	0			REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	468.243932	934.473312	-0.11401	-5.3386E-05	1.4543	0.00068097	1.3403	0.00062758	468.2444805811412	99.147	1.8373	99.197	98.705	100.54	0.04982	-0.12514	0.00077289	NaN	45.952	55	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113150	+		57328	20043	38346	38362							0.0034538152922323206
THGRSAAVH	9	Unmodified	_THGRSAAVH_					0	0	0			REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	468.243932	934.473312	2.4477	0.0011461	-1.337	-0.00062603	1.1107	0.00052009	468.24312652927136	99.164	2.2851	99.111	98.423	100.71	-0.053741	-0.21128	-0.0018411	NaN	45.952	71	52	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118210	+		57329	20043	38346	38362							0.0034538152922323206
THGRSAAVH	9	Unmodified	_THGRSAAVH_					0	0	0			REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	468.243932	934.473312	0.20942	9.8059E-05	1.9509	0.00091349	2.1603	0.0010116	468.2443570860838	99.141	1.2661	99.189	98.454	99.72	0.047523	-0.1328	0.0012379	NaN	45.952	62	29	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143150	+		57330	20043	38346	38362							0.0034538152922323206
THGRSAAVH	9	Unmodified	_THGRSAAVH_					0	0	0			REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	468.243932	934.473312	-0.96985	-0.00045413	2.2916	0.001073	1.3218	0.0006189	468.2447381444148	99.334	1.808	99.556	99.208	101.02	0.22263	0.23441	0.001557	NaN	45.952	53	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62569	+		57331	20043	38346	38362							0.0034538152922323206
THGRSAAVH	9	Unmodified	_THGRSAAVH_					0	0	0			REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	REV__nc|ENSG00000146926|Q8WXI3-2|ASB10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	468.243932	934.473312	0.76044	0.00035607	0.44866	0.00021008	1.2091	0.00056616	468.2440702110445	99.4	1.0698	99.557	99.275	100.34	0.15659	0.23482	-0.00016888	NaN	45.952	32	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68359	+		57332	20043	38346	38362							0.0034538152922323206
THHGGRTKPL	10	Unmodified	_THHGGRTKPL_					0	0	0			REV__ENST00000225777.7_1_17:76168333-76168627:+|nuORF	REV__ENST00000225777.7_1_17:76168333-76168627:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.306640625	2	552.307064	1102.59957	-0.70613	-0.00039	-0.47813	-0.00026407	-1.1843	-0.00065407	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.86587	1	9533	9533		29.17	0.020503	1	1609500	+		57333	24177	38347	38363	64898	64898					0.052378880345031575
THIFKGKL	8	Unmodified	_THIFKGKL_					0	0	0			REV__nc|ENSG00000151276|Q96QZ7-3|MAGI1	REV__nc|ENSG00000151276|Q96QZ7-3|MAGI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2876892089844	2	472.28982	942.565087	-1.7052	-0.00080536	-2.8033	-0.001324	-4.5086	-0.0021293	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.89962	1	9645	9645		38.806	4.6336	1	40161000	+		57334	20243	38348	38364	64899	64899					0.09150671893701201
THIFKGKL	8	Unmodified	_THIFKGKL_					0	0	0			REV__nc|ENSG00000151276|Q96QZ7-3|MAGI1	REV__nc|ENSG00000151276|Q96QZ7-3|MAGI1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28857421875	2	472.28982	942.565087	-1.7052	-0.00080534	-2.46	-0.0011618	-4.1652	-0.0019672	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.80706	2	12864	12503;12864		30.504	3.7238	1	3080300	+		57335	20243	38348	38364	64900;64901	64901					0.09150671893701201
THIGGLPL	8	Unmodified	_THIGGLPL_					0	0	0		nc|ENSG00000121446|A5PLK6-6|RGSL1;ENSG00000121446|ENST00000294854|RGSL1	nc|ENSG00000121446|A5PLK6-6|RGSL1	nc|ENSG00000121446|A5PLK6-6|RGSL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.9228820800781	2	404.239796	806.465038	0.45461	0.00018377	-0.2543	-0.0001028	0.20031	8.0974E-05	404.239475960261	26.119	0.33357	26.165	25.967	26.301	0.045507					12	8	2	0	0	0	0.4196	1	1090	1090		21.702	7.0382	1	24186			57336	3184	38349	38365	64902	64902					0.05406434559904483
THIGGLPL	8	Unmodified	_THIGGLPL_					0	0	0		nc|ENSG00000121446|A5PLK6-6|RGSL1;ENSG00000121446|ENST00000294854|RGSL1	nc|ENSG00000121446|A5PLK6-6|RGSL1	nc|ENSG00000121446|A5PLK6-6|RGSL1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	404.239796	806.465038	-1.9278	-0.00077928	2.1981	0.00088857	0.27037	0.00010929	404.2404738746992	26.238	0.46096	26.305	26.095	26.556	0.066877	-0.014151	0.0018173	NaN	21.702	26	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43867			57337	3184	38349	38365							0.05406434559904483
THIIISKQTG	10	Unmodified	_THIIISKQTG_					0	0	0			REV__nc|ENSG00000118432|P21554-2|CNR1	REV__nc|ENSG00000118432|P21554-2|CNR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3209838867188	2	549.319306	1096.62406	-1.4544	-0.00079891	-1.5897	-0.00087326	-3.0441	-0.0016722	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.85834	1	10637	10637		22.58	0.61977	1	2310400	+		57338	18310	38350	38366	64903	64903					0.0796110339738334
THIIKLKSLIS	11	Unmodified	_THIIKLKSLIS_					0	0	0			REV__ENST00000436625.1_1_7:63930096-63930567:+|nuORF	REV__ENST00000436625.1_1_7:63930096-63930567:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3795166015625	2	626.903005	1251.79146	-1.202	-0.00075351	-1.4955	-0.00093751	-2.6974	-0.001691	626.9025179314431	105.35	0.39333	105.42	105.18	105.57	0.073112					16	9	2	0	0	0	0.17245	1	11174	11174		23.523	9.3856	1	311870	+		57339	26692	38351	38367	64904	64904					0.17563370942139045
THIILHQL	8	Unmodified	_THIILHQL_					0	0	0			REV__ENSG00000178229|ENST00000321545|ZNF543	REV__ENSG00000178229|ENST00000321545|ZNF543	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.7909240722656	2	487.792727	973.5709	-1.0481	-0.00051127	-3.1066	-0.0015154	-4.1547	-0.0020267	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.91005	1	7871	7871		42.474	0	1	1176800	+		57340	22267	38352	38368	64905	64905					0.08305770405377189
THIKKKKHN	9	Unmodified	_THIKKKKHN_					0	0	0			REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.330078125	2	567.348732	1132.68291	0.48129	0.00027306	-2.4637	-0.0013978	-1.9824	-0.0011247	567.3471235347201	91.693	0.21529	91.915	91.85	92.065	0.22157					7	4	2	0	0	0	0.20789	1	9256	9256		15.642	5.9362	1	80937	+		57341	27161	38353	38369	64906	64906					0.1218762448236248
THIKLHRE	8	Unmodified	_THIKLHRE_					0	0	0			REV__nc|ENSG00000020256|Q9NTW7|ZFP64;REV__nc|ENSG00000020256|Q9NTW7-6|ZFP64	REV__nc|ENSG00000020256|Q9NTW7|ZFP64	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3146362304688	2	517.298707	1032.58286	2.3749	0.0012285	0.91935	0.00047558	3.2942	0.0017041	517.298766397339	101.07	0.56776	101.39	100.96	101.52	0.32511					31	14	3	0	0	0	0.4196	1	12243	12243		45.952	26.592	1	328300	+		57342	29677;16235	38354	38370	64907	64907					0.06787387148574453
THINEMMVF	9	Unmodified	_THINEMMVF_					0	0	0		ENSG00000171505|ENST00000304880|OR1N1	ENSG00000171505|ENST00000304880|OR1N1	ENSG00000171505|ENST00000304880|OR1N1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3115234375	2	561.259545	1120.50454	0.33072	0.00018562	-0.83482	-0.00046855	-0.5041	-0.00028293	561.2587948577748	58.319	0.95551	58.872	58.387	59.343	0.55323					59	22	3	0	0	0	0.20789	1	6133	6133		35.152	0	1	834150			57343	6676	38355	38371	64908	64908					-0.05089549543185967
THIRKHNAL	9	Unmodified	_THIRKHNAL_					0	0	0			REV__ENSG00000197123|ENST00000421025|ZNF679	REV__ENSG00000197123|ENST00000421025|ZNF679	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3173828125	2	545.317432	1088.62031	1.9901	0.0010853	-3.3293	-0.0018155	-1.3392	-0.00073027	545.3154620791847	88.702	3.0452	88.63	86.563	89.609	-0.07238					243	71	4	0	0	0	0.78124	1	9059	9059		30.318	0	1	4704900	+		57344	23200	38356	38372	64909	64909					0.07954478414171717
THIRKHNAL	9	Unmodified	_THIRKHNAL_					0	0	0			REV__ENSG00000197123|ENST00000421025|ZNF679	REV__ENSG00000197123|ENST00000421025|ZNF679	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3154907226562	2	545.317432	1088.62031	0.65018	0.00035456	-2.1499	-0.0011724	-1.4998	-0.00081784	545.316213260096	93.135	0.92345	93.576	93.271	94.194	0.44099					56	21	3	0	0	0	0.67345	1	11085	11085		42.396	1.618	1	496970	+		57345	23200	38356	38372	64910	64910					0.07954478414171717
THIRQHKILA	10	Unmodified	_THIRQHKILA_					0	0	0			REV__ENSG00000196391|ENST00000354377|ZNF774	REV__ENSG00000196391|ENST00000354377|ZNF774	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24810791015625	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.71	1	115.69	115.19	116.19	-0.02433								0	0	0	0.45132	1	12810	12810		14.086	0	1		+		57346	23123	38357	38373	64911	64911					0.12079296028127828
THIRRCHTLV	10	Unmodified	_THIRRCHTLV_					0	0	0			REV__ENST00000457177.5_1_19:58057843-58058188:-|nuORF	REV__ENST00000457177.5_1_19:58057843-58058188:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.3455200195312	2	618.343123	1234.67169	0.89263	0.00055195	3.6134	0.0022343	4.506	0.0027863	618.3452359789501	97.829	3.1632	97.989	96.92	100.08	0.16073					214	73	4	0	0	0	0.86587	1	10167	10167		29.17	0	1	874220	+		57347	26963	38358	38374	64912	64912					0.06374479116561815
THIRRHKA	8	Unmodified	_THIRRHKA_					0	0	0			REV__nc|ENSG00000123870|P52743|ZNF137P	REV__nc|ENSG00000123870|P52743|ZNF137P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8034973144531	2	509.804491	1017.59443	0.31699	0.0001616	-1.8438	-0.00093997	-1.5268	-0.00077836	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.88915	1	10167	10167		35.201	0	1	2635100	+		57348	23239	38359	38375	64913	64913					0.08633628962547846
THIRVHRN	8	Unmodified	_THIRVHRN_					0	0	0			REV__ENSG00000186300|ENST00000334241|ZNF555	REV__ENSG00000186300|ENST00000334241|ZNF555	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7937622070312	2	516.794124	1031.57369	1.557	0.00080467	-2.8332	-0.0014642	-1.2762	-0.00065953	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.884	1	9151	9151		33.516	0	1	834930	+		57349	22841	38360	38376	64914	64914					0.05917038582902023
THISDLPS	8	Unmodified	_THISDLPS_					0	0	0			REV__nc|ENSG00000185808|P57054-3|PIGP	REV__nc|ENSG00000185808|P57054-3|PIGP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.22412109375	2	435.2218	868.429047	1.1398	0.00049606	2.7676	0.0012045	3.9074	0.0017006	435.2228723544136	94.167	0.8138	94.599	94.344	95.158	0.4324					35	21	2	0	0	0	0.91005	1	11239	11239		42.474	1.6963	1	998480	+		57350	22795	38361	38377	64915	64915					-0.01043067407624676
THIVGPLC	8	Unmodified	_THIVGPLC_					0	0	0		nc|ENSG00000152270|Q13370-2|PDE3B;ENSG00000152270|ENST00000282096|PDE3B	nc|ENSG00000152270|Q13370-2|PDE3B	nc|ENSG00000152270|Q13370-2|PDE3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.22735595703125	2	420.225831	838.437109	2.4843	0.001044	2.4469	0.0010283	4.9312	0.0020722	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.89457	1	7948	7948		37.028	5.0736	1	961790			57351	5166	38362	38378	64916	64916					0.01142788308152376
THIVKHKML	9	Unmodified	_THIVKHKML_					0	0	0			REV__ENSG00000196350|ENST00000601693|ZNF729	REV__ENSG00000196350|ENST00000601693|ZNF729	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8297119140625	2	553.828786	1105.64302	2.0416	0.0011307	0.42617	0.00023602	2.4678	0.0013667	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.7932	1	9455	9455		24.203	0	1	5457600	+		57352	23117	38363	38379	64917	64917					0.09442361487435846
THIVKHKML	9	Unmodified	_THIVKHKML_					0	0	0			REV__ENSG00000196350|ENST00000601693|ZNF729	REV__ENSG00000196350|ENST00000601693|ZNF729	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8297729492188	2	553.828786	1105.64302	1.198	0.00066348	1.0602	0.00058716	2.2582	0.0012506	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.77546	1	9074	9074		31.955	1.4512	1	1689700	+		57353	23117	38363	38379	64918	64918					0.09442361487435846
THIWIAPNLL	10	Unmodified	_THIWIAPNLL_					0	0	0			REV__nc|ENSG00000198589|P50851-2|LRBA	REV__nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.343017578125	2	589.340041	1176.66553	0.83312	0.00049099	4.0027	0.002359	4.8358	0.00285	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.86763	1	9837	9837		26.693	1.1189	1	20363000	+		57354	23342	38364	38380	64919	64919					0.08426284156712427
THKAIERI	8	Unmodified	_THKAIERI_					0	0	0			REV__nc|ENSG00000077327|O75602-2|SPAG6	REV__nc|ENSG00000077327|O75602-2|SPAG6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	484.2879638671875	2	484.287808	966.561064	-0.9205	-0.00044579	3.0882	0.0014956	2.1677	0.0010498	484.289486498501	94.904	1.1782	94.904	94.308	95.486	0					43	27	2	0	0	0	0.83058	1	9419	9419		12.959	0	1	223130	+		57355	16745	38365	38381	64920	64920					0.07644582400007494
THKAIQALNGR	11	Unmodified	_THKAIQALNGR_					0	0	0		nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60;ENSG00000179950|ENST00000526683|PUF60	nc|ENSG00000179950|Q9UHX1-4|PUF60	nc|ENSG00000179950|Q9UHX1-4|PUF60	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.8466796875	2	604.846553	1207.67855	-0.48055	-0.00029066	-0.12066	-7.2981E-05	-0.60121	-0.00036364	604.8463930179684	96.382	3.2088	96.445	95.465	98.674	0.06337					204	74	4	0	0	0	0.71207	1	10213	10213		29.551	5.0316	1	566220			57356	7309	38366	38382	64921	64921					0.08302115268793386
THKCQFTIK	9	Carbamidomethyl (C)	_THKC(Carbamidomethyl (C))QFTIK_	THKC(1)QFTIK		THKC(72)QFTIK		0	1	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	581.802978515625	2	581.805508	1161.59646	-0.84342	-0.00049071	-1.9532	-0.0011364	-2.7966	-0.0016271	581.8042209078138	64.934	0.90569	64.934	64.471	65.377	0					126	41	4	0	0	0	0.21969	1	5703	5703		71.877	11.759	1	1021200	+		57357	16148	38367	38383	64922	64922	216				0.022128768654965825
THKCQFTIK	9	Carbamidomethyl (C)	_THKC(Carbamidomethyl (C))QFTIK_	THKC(1)QFTIK		THKC(75)QFTIK		0	1	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.8038940429688	2	581.805508	1161.59646	-0.85723	-0.00049874	-2.1652	-0.0012597	-3.0224	-0.0017585	581.8041359545632	64.921	1.0467	64.925	64.44	65.486	0.0046997					94	34	4	0	0	0	0.19437	2	6055	6055;6115		75.043	7.8258	1	1939500	+		57358	16148	38367	38383	64923;64924	64923	216				0.022128768654965825
THKCQFTIK	9	Carbamidomethyl (C)	_THKC(Carbamidomethyl (C))QFTIK_	THKC(1)QFTIK		THKC(77)QFTIK		0	1	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.8037109375	2	581.805508	1161.59646	0.11403	6.6344E-05	-3.1647	-0.0018412	-3.0507	-0.0017749	581.8035838058198	64.735	1.1415	64.7	64.269	65.41	-0.034798					108	38	4	0	0	0	0.18601	1	6215	6215		76.774	12.567	1	2150000	+		57359	16148	38367	38383	64925	64925	216				0.022128768654965825
THKCQFTIK	9	Carbamidomethyl (C)	_THKC(Carbamidomethyl (C))QFTIK_	THKC(1)QFTIK		THKC(88)QFTIK		0	1	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.8035278320312	2	581.805508	1161.59646	-1.3384	-0.00077869	-1.6905	-0.00098356	-3.0289	-0.0017622	581.804412877013	64.652	1.1795	64.679	64.1	65.279	0.027138					99	35	4	0	0	0	0.12652	1	6117	6117		87.754	8.3033	1	1830900	+		57360	16148	38367	38383	64926	64926	216				0.022128768654965825
THKCQFTIK	9	Carbamidomethyl (C)	_THKC(Carbamidomethyl (C))QFTIK_	THKC(1)QFTIK		THKC(90)QFTIK		0	1	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	581.8035888671875	2	581.805508	1161.59646	-0.52283	-0.00030418	-2.2215	-0.0012925	-2.7443	-0.0015967	581.8040900175316	64.716	0.90666	64.754	64.351	65.257	0.037857					89	29	4	0	0	0	0.11055	4	5722	5705;5722;5733;5742		90.37	23.941	1	1330600	+		57361	16148	38367	38383	64927;64928;64929;64930	64928	216				0.022128768654965825
THKCQFTIK	9	Carbamidomethyl (C)	_THKC(Carbamidomethyl (C))QFTIK_	THKC(1)QFTIK		THKC(82)QFTIK		0	1	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.8043212890625	2	581.805508	1161.59646	-0.38859	-0.00022608	-2.4434	-0.0014216	-2.832	-0.0016477	581.8039278699252	62.852	1.4375	63.407	62.993	64.43	0.55449					85	33	4	0	0	0	0.15959	1	6771	6771		82.241	12.613	1	1607100	+		57362	16148	38367	38383	64931	64931	216				0.022128768654965825
THKESAGKKHI	11	Unmodified	_THKESAGKKHI_					0	0	0		ENSG00000168631|ENST00000462446|MUCL3;nc|ENSG00000168631|Q3MIW9|MUCL3	ENSG00000168631|ENST00000462446|MUCL3	ENSG00000168631|ENST00000462446|MUCL3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3455200195312	2	618.346386	1234.67822	-0.1645	-0.00010172	-0.48965	-0.00030278	-0.65415	-0.00040449	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.75544	1	9818	9818		20.837	0.84038	1	511870			57363	6421	38368	38384	64932	64932					0.0702669554896147
THKESAGKKHI	11	Unmodified	_THKESAGKKHI_					0	0	0		ENSG00000168631|ENST00000462446|MUCL3;nc|ENSG00000168631|Q3MIW9|MUCL3	ENSG00000168631|ENST00000462446|MUCL3	ENSG00000168631|ENST00000462446|MUCL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.3456420898438	2	618.346386	1234.67822	0.55169	0.00034113	-1.3321	-0.00082372	-0.78044	-0.00048258	618.3454418699644	97.724	3.0702	97.772	96.827	99.897	0.048157					199	71	4	0	0	0	0.638	1	10474	10474		40.058	9.7405	1	831610			57364	6421	38368	38384	64933	64933					0.0702669554896147
THKESAGKKHI	11	Unmodified	_THKESAGKKHI_					0	0	0		ENSG00000168631|ENST00000462446|MUCL3;nc|ENSG00000168631|Q3MIW9|MUCL3	ENSG00000168631|ENST00000462446|MUCL3	ENSG00000168631|ENST00000462446|MUCL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	618.3463745117188	2	618.346386	1234.67822	1.2492	0.00077242	-2.1265	-0.0013149	-0.8773	-0.00054247	618.344978551102	97.744	3.3917	97.971	96.779	100.17	0.22787					230	79	4	0	0	0	0.62614	1	10212	10212		41.427	13.544	1	960930			57365	6421	38368	38384	64934	64934					0.0702669554896147
THKESAGKKHI	11	Unmodified	_THKESAGKKHI_					0	0	0		ENSG00000168631|ENST00000462446|MUCL3;nc|ENSG00000168631|Q3MIW9|MUCL3	ENSG00000168631|ENST00000462446|MUCL3	ENSG00000168631|ENST00000462446|MUCL3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	618.3455810546875	2	618.346386	1234.67822	-1.2296	-0.00076029	0.47164	0.00029164	-0.75792	-0.00046865	618.3465539597456	97.787	3.3462	97.982	96.915	100.26	0.19585					219	77	4	0	0	0	0.6493	1	10132	10132		38.754	4.832	1	806570			57366	6421	38368	38384	64935	64935					0.0702669554896147
THKFLAQI	8	Unmodified	_THKFLAQI_					0	0	0		ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2764892578125	2	479.279452	956.544351	-1.0476	-0.00050211	-2.956	-0.0014168	-4.0037	-0.0019189	479.27794521109934	87.608	3.0549	87.608	87.076	90.13	0					149	70	3	0	0	0	0.884	1	8384	8384		33.516	3.0119	1	645930			57367	7269	38369	38385	64936	64936					0.0643408151404401
THKFLAQI	8	Unmodified	_THKFLAQI_					0	0	0		ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2775573730469	2	479.279452	956.544351	-0.098244	-4.7086E-05	-4.1769	-0.0020019	-4.2751	-0.002049	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.89494	1	8620	8620		37.159	4.3467	1	6799600			57368	7269	38369	38385	64937	64937					0.0643408151404401
THKFLAQI	8	Unmodified	_THKFLAQI_					0	0	0		ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774353027344	2	479.279452	956.544351	-0.83761	-0.00040145	-3.5851	-0.0017182	-4.4227	-0.0021197	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.87922	1	7927	7927		31.955	5.1588	1	2142700			57369	7269	38369	38385	64938	64938					0.0643408151404401
THKFLAQI	8	Unmodified	_THKFLAQI_					0	0	0		ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774963378906	2	479.279452	956.544351	-1.5678	-0.00075141	-2.7191	-0.0013032	-4.2869	-0.0020546	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.90465	1	8610	8610		40.573	1.7665	1	6441000			57370	7269	38369	38385	64939	64939					0.0643408151404401
THKGILVRAVN	11	Unmodified	_THKGILVRAVN_					0	0	0			REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2468566894531	3	403.247173	1206.71969	-0.96192	-0.00038789	0.31664	0.00012768	-0.64528	-0.00026021	403.2472281244655	104.88	3.5231	104.88	103.72	107.24	0					230	83	5	0	0	0	0.73893	4	10834	10834;10846;10858;10913		27.644	5.063	1	5402700	+		57371	26141	38370	38386	64940;64941;64942;64943	64940					0.12459876308275852
THKGILVRAVN	11	Unmodified	_THKGILVRAVN_					0	0	0			REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2469482421875	3	403.247173	1206.71969	-0.18602	-7.5014E-05	-0.48244	-0.00019454	-0.66847	-0.00026956	403.24693252956035	104.74	3.7019	104.73	104.1	107.81	-0.014809					290	87	6	0	0	0	0.73893	2	11392	11392;11431		34.087	0	1	12308000	+		57372	26141	38370	38386	64944;64945	64944					0.12459876308275852
THKGILVRAVN	11	Unmodified	_THKGILVRAVN_					0	0	0			REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.246826171875	3	403.247173	1206.71969	2.718	0.001096	-3.4576	-0.0013942	-0.73958	-0.00029823	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.74763	1	11476	11476		25.892	12.384	1	15597000	+		57373	26141	38370	38386	64946	64946					0.12459876308275852
THKGILVRAVN	11	Unmodified	_THKGILVRAVN_					0	0	0			REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2468566894531	3	403.247173	1206.71969	-1.7912	-0.0007223	1.0466	0.00042203	-0.74462	-0.00030027	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.7434	3	11019	11019;11137;11174		26.75	14.317	1	20673000	+		57374	26141	38370	38386	64947;64948;64949	64947					0.12459876308275852
THKGILVRAVN	11	Unmodified	_THKGILVRAVN_					0	0	0			REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.24688720703125	3	403.247173	1206.71969	0.73411	0.00029603	-1.4803	-0.00059692	-0.74617	-0.00030089	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.75164	1	11209	11209		19.627	5.5409	1	18617000	+		57375	26141	38370	38386	64950	64950					0.12459876308275852
THKGILVRAVN	11	Unmodified	_THKGILVRAVN_					0	0	0			REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2467956542969	3	403.247173	1206.71969	-1.9293	-0.00077799	1.1746	0.00047366	-0.7547	-0.00030433	403.24758115209465	104.53	3.0767	104.62	103.79	106.87	0.093857					248	75	5	0	0	0	0.75544	1	10992	10992		24.276	10.19	1	9819800	+		57376	26141	38370	38386	64951	64951					0.12459876308275852
THKGILVRAVN	11	Unmodified	_THKGILVRAVN_					0	0	0			REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.2474670410156	3	403.247173	1206.71969	2.9965	0.0012083	-3.6415	-0.0014684	-0.64503	-0.00026011	403.2459676680147	104.3	1.9938	104.48	103.68	105.68	0.18887					128	50	4	0	0	0	0.66929	1	12679	12679		38.714	23.377	1	496390	+		57377	26141	38370	38386	64952	64952					0.12459876308275852
THKIIYTR	8	Unmodified	_THKIIYTR_					0	0	0		nc|ENSG00000196172|Q96N22-2|ZNF681;ENSG00000196172|ENST00000402377|ZNF681	nc|ENSG00000196172|Q96N22-2|ZNF681	nc|ENSG00000196172|Q96N22-2|ZNF681	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3059692382812	2	516.303458	1030.59236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.478	1	62.506	62.006	63.006	0.028133								0	0	0	0.29264	1	5832	5832		29.15	2.3535	1				57378	8022	38371	38387	64953	64953					0.07829155434069435
THKIRIHSK	9	Unmodified	_THKIRIHSK_					0	0	0			REV__nc|ENSG00000020256|Q9NTW7|ZFP64	REV__nc|ENSG00000020256|Q9NTW7|ZFP64	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3402099609375	2	560.340907	1118.66726	-1.1297	-0.00063301	-0.12552	-7.0334E-05	-1.2552	-0.00070335	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.7932	1	11347	11347		20.947	0.95016	1	84412000	+		57379	29677	38372	38388	64954	64954					0.11267337965296065
THKIRIHSK	9	Unmodified	_THKIRIHSK_					0	0	0			REV__nc|ENSG00000020256|Q9NTW7|ZFP64	REV__nc|ENSG00000020256|Q9NTW7|ZFP64	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.340576171875	2	560.340907	1118.66726	1.6683	0.00093481	-2.8998	-0.0016249	-1.2316	-0.00069009	560.3391894187363	89.567	3.3537	89.494	86.948	90.302	-0.07238					131	78	3	0	0	0	0.66686	2	9410	9355;9410		42.864	7.246	1	1075700	+		57380	29677	38372	38388	64955;64956	64956					0.11267337965296065
THKIRIHSK	9	Unmodified	_THKIRIHSK_					0	0	0			REV__nc|ENSG00000020256|Q9NTW7|ZFP64	REV__nc|ENSG00000020256|Q9NTW7|ZFP64	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.34033203125	2	560.340907	1118.66726	1.3346	0.00074785	-2.4815	-0.0013905	-1.1468	-0.0006426	560.3393959922291	89.415	3.8062	89.464	86.947	90.753	0.048157					198	89	4	0	0	0	0.66686	3	9235	9189;9223;9235		42.864	5.1599	1	1103500	+		57381	29677	38372	38388	64957;64958;64959	64959					0.11267337965296065
THKIRIHSK	9	Unmodified	_THKIRIHSK_					0	0	0			REV__nc|ENSG00000020256|Q9NTW7|ZFP64	REV__nc|ENSG00000020256|Q9NTW7|ZFP64	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3409423828125	2	560.340907	1118.66726	0.75729	0.00042434	-2	-0.0011207	-1.2427	-0.00069633	560.3396777082794	89.478	2.7427	89.63	87.684	90.427	0.1519					160	64	4	0	0	0	0.7932	1	8903	8903		24.519	1.4767	1	678500	+		57382	29677	38372	38388	64960	64960					0.11267337965296065
THKIRIHSK	9	Unmodified	_THKIRIHSK_					0	0	0			REV__nc|ENSG00000020256|Q9NTW7|ZFP64	REV__nc|ENSG00000020256|Q9NTW7|ZFP64	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.341552734375	2	560.340907	1118.66726	-1.204	-0.00067466	0.24305	0.00013619	-0.96096	-0.00053847	560.3409757203636	89.276	1.5732	89.747	88.641	90.214	0.47068					77	38	4	0	0	0	0.66686	1	10598	10598		42.864	8.9426	1	617690	+		57383	29677	38372	38388	64961	64961					0.11267337965296065
THKIVSVS	8	Unmodified	_THKIVSVS_					0	0	0			REV__nc|ENSG00000196296|O14983-3|ATP2A1;REV__ENSG00000174437|ENST00000539276|ATP2A2	REV__ENSG00000174437|ENST00000539276|ATP2A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.7545471191406	2	435.75581	869.497067	0.19203	8.3677E-05	-3.1627	-0.0013782	-2.9707	-0.0012945	435.7543509349436	78.035	1.1687	78.598	77.699	78.868	0.56332					54	27	3	0	0	0	0.87922	1	8957	8957		31.955	11.473	1	812270	+		57384	23113;21991	38373	38389	64962	64962					0.05709802243052309
THKKHYFA	8	Unmodified	_THKKHYFA_					0	0	0			REV__ENSG00000189325|ENST00000437635|BNIP5	REV__ENSG00000189325|ENST00000437635|BNIP5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7931518554688	2	516.274701	1030.53485	-1.0194	-0.00052627	3.1584	0.0016306	2.139	0.0011043	516.276132272208	88.189	0.23383	88.652	88.556	88.79	0.46312					6	5	2	0	0	0	0.4196	1	10423	10423		27.882	6.9353	1	41140	+		57385	23079	38374	38390	64963	64963					0.020803132285209358
THKKKKSLKK	10	Unmodified	_THKKKKSLKK_					0	0	0			REV__ENST00000327300.11_1_1:32508467-32508587:+|nuORF	REV__ENST00000327300.11_1_1:32508467-32508587:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.8013000488281	3	409.274952	1224.80303	1.6121	0.0006598	-0.042349	-1.7333E-05	1.5698	0.00064247	409.27518182052745	20.014	0.65671	19.545	19.019	19.676	-0.46967					16	13	2	0	0	0	0.37624	1	576	576		14.086	3.9821	1	35396	+		57386	25088	38375	38391	64964	64964					0.19961612756128488
THKKSGRS	8	Unmodified	_THKKSGRS_					0	0	0		ENSG00000116539|ENST00000392403|ASH1L;nc|ENSG00000116539|Q9NR48|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	ENSG00000116539|ENST00000392403|ASH1L	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.75469970703125	2	450.754133	899.493713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.136	1	79.136	78.636	79.636	0								0	0	0	0.29245	1	7268	7268		30.504	0	1				57387	2924	38376	38392	64965	64965					0.039945521890558666
THKLKSIIIG	10	Unmodified	_THKLKSIIIG_					0	0	0		nc|ENSG00000140993|Q6NT04-2|TIGD7;ENSG00000140993|ENST00000396862|TIGD7	nc|ENSG00000140993|Q6NT04-2|TIGD7	nc|ENSG00000140993|Q6NT04-2|TIGD7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.353515625	2	555.355691	1108.69683	-0.86355	-0.00047958	-3.4797	-0.0019325	-4.3433	-0.0024121	555.3536421650435	101.16	2.3681	101.19	100.7	103.07	0.031036					166	56	5	0	0	0	0.86589	1	10768	10768		29.15	8.2026	1	6361400			57388	4472	38377	38393	64966	64966					0.14682857190791765
THKLSPQHR	9	Unmodified	_THKLSPQHR_					0	0	0			REV__ENSG00000152467|ENST00000282326|ZSCAN1	REV__ENSG00000152467|ENST00000282326|ZSCAN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3062744140625	2	552.307064	1102.59957	-0.59209	-0.00032702	-0.41687	-0.00023024	-1.009	-0.00055726	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.75725	1	9092	9092		36.447	1.2947	1	1102700	+		57389	20301	38378	38394	64967	64967					0.052378880345031575
THKLTVLPSRN	11	Unmodified	_THKLTVLPSRN_					0	0	0		nc|ENSG00000111452|Q6QNK2-4|ADGRD1;ENST00000541143.5_1_12:131453487-131453694:+|nuORF	nc|ENSG00000111452|Q6QNK2-4|ADGRD1	nc|ENSG00000111452|Q6QNK2-4|ADGRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.58148193359375	3	422.582333	1264.72517	2.9692	0.0012547	-3.8305	-0.0016187	-0.86127	-0.00036396	422.58062707178027	97.728	3.629	97.776	96.312	99.941	0.048164					208	84	4	0	0	0	0.74672	1	10502	10502		22.781	1.001	1	464700			57390	14845	38379	38395	64968	64968					0.10339555100085818
THKNQKTKTQ	10	Unmodified	_THKNQKTKTQ_					0	0	0			REV__ENST00000519204.5_1_5:167690101-167690218:+|nuORF	REV__ENST00000519204.5_1_5:167690101-167690218:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.92303466796875	3	405.226438	1212.65748	-0.36074	-0.00014618	4.0843	0.0016551	3.7236	0.0015089	405.2279549524149	26.527	0.52789	26.488	26.237	26.765	-0.038525					15	10	2	0	0	0	0.37624	1	1208	1208		8.0344	0	1	21880	+		57391	28074	38380	38396	64969	64969					0.05966105169295588
THKPDKLRR	9	Unmodified	_THKPDKLRR_					0	0	0		ENSG00000183476|ENST00000328828|SH2D7	ENSG00000183476|ENST00000328828|SH2D7	ENSG00000183476|ENST00000328828|SH2D7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8431396484375	2	575.843813	1149.67307	0.91496	0.00052687	-2.3716	-0.0013657	-1.4567	-0.00083881	575.8423131361362	90.432	2.8004	90.479	88.667	91.467	0.046448					215	66	4	0	0	0	0.78983	1	9297	9297		27.882	1.1893	1	2025300			57392	7534	38381	38397	64970	64970					0.10422436476983421
THKPLEDLVL	10	Unmodified	_THKPLEDLVL_					0	0	0		ENST00000602219.1_1_19:8552721-8552967:+|nuORF	ENST00000602219.1_1_19:8552721-8552967:+|nuORF	ENST00000602219.1_1_19:8552721-8552967:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8328247070312	2	582.834788	1163.65502	-0.83199	-0.00048491	-2.8678	-0.0016715	-3.6998	-0.0021564	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.86348	1	9811	9811		31.53	0	1	796430			57393	14401	38382	38398	64971	64971					0.07974256711599992
THKQLETG	8	Unmodified	_THKQLETG_					0	0	0			REV__nc|ENSG00000277200|A0A8I5KY20|CCDC92B	REV__nc|ENSG00000277200|A0A8I5KY20|CCDC92B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2639465332031	2	457.240524	912.466495	0.26394	0.00012068	0.26814	0.0001226	0.53208	0.00024329	457.2403256489709	79.616	0.66165	79.67	79.265	79.927	0.053841					29	21	2	0	0	0	0.4196	1	7857	7857		44.117	9.9443	1	73379	+		57394	30271	38383	38399	64972	64972					0.006760238580113764
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2523193359375	2	435.251226	868.487899	-1.3354	-0.00058123	1.6938	0.00073721	0.35838	0.00015599	435.2518916713919	77.486	2.837	77.486	75.833	78.67	0					195	121	3	0	0	0	0.84341	1	7091	7091		24.203	2.2429	1	487350	+		57395	20480	38384	38400	64973	64973					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2538757324219	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.8347	20	7846	7270;7343;7351;7383;7399;7419;7495;7505;7514;7531;7539;7564;7598;7609;7639;7649;7728;7741;7763;7846		53.351	15.448	1	1788100	+		57396	20480	38384	38400	64974;64975;64976;64977;64978;64979;64980;64981;64982;64983;64984;64985;64986;64987;64988;64989;64990;64991;64992;64993	64993					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2529296875	2	435.251226	868.487899	-1.1061	-0.00048143	1.1871	0.00051667	0.080963	3.5239E-05	435.2516688804781	93.233	1.4228	93.233	92.721	94.144	0					80	32	3	0	0	0	0.87064	1	9165	9165		29.15	2.3535	1	477960	+		57397	20480	38384	38400	64994	64994					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25152587890625	2	435.251226	868.487899	-0.16621	-7.2343E-05	0.40306	0.00017543	0.23685	0.00010309	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.88601	1	7516	7516		34.173	7.3764	1	768200	+		57398	20480	38384	38400	64995	64995					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2514953613281	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.8621	10	7703	7641;7703;7712;7870;7889;7900;7970;8052;8064;8101		49.442	18.938	1	2823900	+		57399	20480	38384	38400	64996;64997;64998;64999;65000;65001;65002;65003;65004;65005	64997					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2518310546875	2	435.251226	868.487899	-0.16511	-7.1865E-05	0.27086	0.00011789	0.10575	4.6027E-05	435.25126703319626	93.058	1.7253	93.128	92.541	94.266	0.06987					99	40	3	0	0	0	0.84341	1	9649	9649		24.203	2.5004	1	726460	+		57400	20480	38384	38400	65006	65006					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25238037109375	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.84341	15	8351	7685;7728;7911;7947;8126;8160;8196;8221;8233;8244;8278;8315;8327;8351;8388		56.721	26.217	1	3292300	+		57401	20480	38384	38400	65007;65008;65009;65010;65011;65012;65013;65014;65015;65016;65017;65018;65019;65020;65021	65020					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7596435546875	2	435.251226	868.487899	1.069	0.00046527	-1.605	-0.00069856	-0.53601	-0.0002333	435.25027582103456	87.917	0.30359	87.843	87.595	87.899	-0.074005					9	6	2	0	0	0	0.4196	1	9094	9094		37.159	22.294	1	25694	+		57402	20480	38384	38400	65022	65022					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2522888183594	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.82658	9	7483	7483;7557;7583;7733;8049;8072;8143;8155;8229		40.573	6.6555	1	3370400	+		57403	20480	38384	38400	65023;65024;65025;65026;65027;65028;65029;65030;65031	65023					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25396728515625	2	435.251226	868.487899	2.2466	0.00097783	-2.2122	-0.00096285	0.034413	1.4978E-05	435.2501663639107	92.812	1.5534	92.857	92.283	93.837	0.045448					79	36	3	0	0	0	0.88601	1	9687	9687		34.173	5.023	1	840940	+		57404	20480	38384	38400	65032	65032					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2514343261719	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.8621	8	7715	7631;7715;7739;7751;7859;7918;7942;7994		51.335	14.176	1	3322700	+		57405	20480	38384	38400	65033;65034;65035;65036;65037;65038;65039;65040	65034					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25164794921875	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.82658	15	7829	7499;7630;7659;7700;7734;7781;7829;7841;7853;7867;7892;7922;7927;7975;8036		40.573	26.693	1	2743300	+		57406	20480	38384	38400	65041;65042;65043;65044;65045;65046;65047;65048;65049;65050;65051;65052;65053;65054;65055	65047					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2521667480469	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.84341	11	7898	7330;7392;7471;7512;7652;7662;7718;7740;7764;7801;7898		45.952	11.709	1	2494100	+		57407	20480	38384	38400	65056;65057;65058;65059;65060;65061;65062;65063;65064;65065;65066	65066					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25164794921875	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.89494	2	9278	9278;9305		44.377	13.874	1	2020200	+		57408	20480	38384	38400	65067;65068	65067					0.04839453677379879
THKRGLSA	8	Unmodified	_THKRGLSA_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2513732910156	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.88601	5	9178	9142;9154;9166;9178;9215		45.952	15.448	1	2235800	+		57409	20480	38384	38400	65069;65070;65071;65072;65073	65072					0.04839453677379879
THKRGLSAHK	10	Unmodified	_THKRGLSAHK_					0	0	0			REV__nc|ENSG00000156299|Q13009-2|TIAM1	REV__nc|ENSG00000156299|Q13009-2|TIAM1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.8334350585938	2	567.828163	1133.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.97	1	94.411	93.911	94.911	0.44099								0	0	0	0.45132	1	11208	11208		33.922	6.8743	1		+		57410	20480	38385	38401	65074	65074					0.08029863442902752
THKRTLTT	8	Unmodified	_THKRTLTT_					0	0	0			REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.278076171875	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.87479	1	7551	7551		30.504	0	1	1311100	+		57411	25788	38386	38402	65075	65075					0.06031992020314192
THKRTLTT	8	Unmodified	_THKRTLTT_					0	0	0			REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2779235839844	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.8347	1	8336	8336		23.042	0	1	4644500	+		57412	25788	38386	38402	65076	65076					0.06031992020314192
THKRTLTT	8	Unmodified	_THKRTLTT_					0	0	0			REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2794189453125	2	479.277441	956.540328	-0.90579	-0.00043413	1.2321	0.00059054	0.32635	0.00015641	479.2779542538447	97.646	1.4109	97.646	97.118	98.528	0					77	33	3	0	0	0	0.88601	1	9834	9834		34.173	9.9698	1	589630	+		57413	25788	38386	38402	65077	65077					0.06031992020314192
THKRTLTT	8	Unmodified	_THKRTLTT_					0	0	0			REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2780456542969	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.87479	1	8994	8994		30.504	1.3336	1	7289200	+		57414	25788	38386	38402	65078	65078					0.06031992020314192
THKRTLTT	8	Unmodified	_THKRTLTT_					0	0	0			REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.277587890625	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.89043	1	8316	8316		35.618	2.1027	1	2046100	+		57415	25788	38386	38402	65079	65079					0.06031992020314192
THKRTLTT	8	Unmodified	_THKRTLTT_					0	0	0			REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27783203125	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.91472	1	8876	8876		44.117	12.162	1	7040000	+		57416	25788	38386	38402	65080	65080					0.06031992020314192
THKRTLTT	8	Unmodified	_THKRTLTT_					0	0	0			REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2784729003906	2	479.277441	956.540328	-0.45441	-0.00021779	0.95209	0.00045632	0.49769	0.00023853	479.2777888563568	97.247	1.3159	97.295	96.739	98.055	0.048157					88	30	4	0	0	0	0.84341	1	10340	10340		24.203	1.1603	1	962360	+		57417	25788	38386	38402	65081	65081					0.06031992020314192
THKRTLTT	8	Unmodified	_THKRTLTT_					0	0	0			REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774353027344	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.86677	3	8302	8045;8302;8563		35.618	3.8107	1	7438100	+		57418	25788	38386	38402	65082;65083;65084	65083					0.06031992020314192
THKRTLTT	8	Unmodified	_THKRTLTT_					0	0	0			REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2780456542969	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.87479	1	7720	7720		30.504	0	1	1802300	+		57419	25788	38386	38402	65085	65085					0.06031992020314192
THKRTLTT	8	Unmodified	_THKRTLTT_					0	0	0			REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	REV__ENST00000374476.3_1_2:177669824-177670178:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2779235839844	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.87064	1	7656	7656		29.15	1.0681	1	1785900	+		57420	25788	38386	38402	65086	65086					0.06031992020314192
THKRVLGA	8	Unmodified	_THKRVLGA_					0	0	0			REV__nc|ENSG00000084112|Q8WYL5-4|SSH1	REV__nc|ENSG00000084112|Q8WYL5-4|SSH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.2649841308594	2	441.269419	880.524284	-0.1543	-6.8089E-05	0.18511	8.1682E-05	0.030803	1.3592E-05	441.2695055661975	103.58	1.0224	103.57	103.22	104.25	-0.0035706					40	24	2	0	0	0	0.85277	1	11149	11149		25.45	0	1	426630	+		57421	16870	38387	38403	65087	65087					0.07924330574087435
THKSKHLE	8	Unmodified	_THKSKHLE_					0	0	0		ENSG00000107611|ENST00000377833|CUBN	ENSG00000107611|ENST00000377833|CUBN	ENSG00000107611|ENST00000377833|CUBN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	490.2674865722656	2	490.269616	978.524678	0.64646	0.00031694	-3.2661	-0.0016013	-2.6197	-0.0012843	490.26800757881944	83.964	3.3049	84.112	83.013	86.318	0.14793					138	76	2	0	0	0	0.89962	1	8268	8268		38.806	6.8513	1	246750			57422	2354	38388	38404	65088	65088					0.03455705503290574
THKSTRPVK	9	Unmodified	_THKSTRPVK_					0	0	0		ENST00000570473.5_1_17:54973221-54981672:-|nuORF;ENST00000572021.5_1_17:54969063-54989474:-|nuORF;ENSG00000121060|ENST00000316881|TRIM25	ENST00000570473.5_1_17:54973221-54981672:-|nuORF	ENST00000570473.5_1_17:54973221-54981672:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	527.3087158203125	2	527.311815	1052.60908	-1.2871	-0.0006787	1.6422	0.00086596	0.35512	0.00018726	527.3131705332578	81.232	0.48231	81.346	81.043	81.526	0.11426					18	11	2	0	0	0	0.71772	1	7737	7737		39.253	5.7372	1	87401			57423	3164	38389	38405	65089	65089					0.08487656320039605
THLAGMPD	8	Unmodified	_THLAGMPD_					0	0	0			REV__ENST00000472641.1_1_6:32116492-32119637:-|nuORF	REV__ENST00000472641.1_1_6:32116492-32119637:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.235107421875	2	421.19727	840.379988	0.088234	3.7164E-05	-3.0339	-0.0012779	-2.9457	-0.0012407	421.1960006854964	39.798	1.8884	39.768	38.412	40.301	-0.030273					58	44	2	0	0	0	0.4196	1	2649	2649		33.516	0	1	47288	+		57424	24112	38390	38406	65090	65090					-0.046586789682237395
THLAVNGFL	9	Unmodified	_THLAVNGFL_					0	0	0		ENSG00000119227|ENST00000412723|PIGZ	ENSG00000119227|ENST00000412723|PIGZ	ENSG00000119227|ENST00000412723|PIGZ	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.26715087890625	2	486.269084	970.523616	-1.0289	-0.00050034	-2.8077	-0.0013653	-3.8366	-0.0018656	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.58151	3	8342	8162;8187;8342		47.916	3.3845	1	1182200			57425	3057	38391	38407	65091;65092;65093	65093					0.0371749113437545
THLAVNGFL	9	Unmodified	_THLAVNGFL_					0	0	0		ENSG00000119227|ENST00000412723|PIGZ	ENSG00000119227|ENST00000412723|PIGZ	ENSG00000119227|ENST00000412723|PIGZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.266845703125	2	486.269084	970.523616	-0.087647	-4.262E-05	-3.8323	-0.0018635	-3.9199	-0.0019061	486.26710603472304	86.356	4.0954	86.423	85.117	89.212	0.067444					314	95	4	0	0	0	0.72402	2	8830	8647;8830		38.806	6.8513	1	1700900			57426	3057	38391	38407	65094;65095	65095					0.0371749113437545
THLAVNGFL	9	Unmodified	_THLAVNGFL_					0	0	0		ENSG00000119227|ENST00000412723|PIGZ	ENSG00000119227|ENST00000412723|PIGZ	ENSG00000119227|ENST00000412723|PIGZ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.2669982910156	2	486.269084	970.523616	-1.0938	-0.00053186	-2.8649	-0.0013931	-3.9586	-0.0019249	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.51307	2	8850	8773;8850		51.335	13.524	1	1852700			57427	3057	38391	38407	65096;65097	65097					0.0371749113437545
THLAVNGFL	9	Unmodified	_THLAVNGFL_					0	0	0		ENSG00000119227|ENST00000412723|PIGZ	ENSG00000119227|ENST00000412723|PIGZ	ENSG00000119227|ENST00000412723|PIGZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.26702880859375	2	486.269084	970.523616	-0.72647	-0.00035326	-3.2279	-0.0015696	-3.9543	-0.0019229	486.2674012957117	86.085	5.1254	86.27	85.016	90.141	0.18522					327	120	4	0	0	0	0.67345	2	8436	8436;8448		42.396	8.2236	1	1830000			57428	3057	38391	38407	65098;65099	65098					0.0371749113437545
THLCSVLK	8	Unmodified	_THLCSVLK_					0	0	0		ENST00000338086.9_1_2:20449433-20449517:-|nuORF	ENST00000338086.9_1_2:20449433-20449517:-|nuORF	ENST00000338086.9_1_2:20449433-20449517:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7552490234375	2	450.752213	899.489873	0.78549	0.00035406	3.5542	0.0016021	4.3397	0.0019561	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.90465	2	8021	8021;8075		45.952	0	1	420760			57429	10196	38392	38408	65100;65101	65100					0.0361074637096408
THLDSPPGGP	10	Unmodified	_THLDSPPGGP_					0	0	0		ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000197136|Q9H6A9-2|PCNX3	ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000197136|Q9H6A9-2|PCNX3	ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.2369384765625	2	489.237981	976.461409	-0.95168	-0.0004656	-1.4583	-0.00071344	-2.4099	-0.001179	489.2372701417275	68.289	0.6958	68.349	68.045	68.741	0.059288					41	27	2	0	0	0	0.85694	1	6110	6110		21.96	1.013	1	129100			57430	8138;15189	38393	38409	65102	65102					-0.02776280004604814
THLEWARNT	9	Unmodified	_THLEWARNT_					0	0	0		nc|ENSG00000167889|Q3V5L5-5|MGAT5B;ENSG00000167889|ENST00000569840|MGAT5B;nc|ENSG00000167889|Q3V5L5-2|MGAT5B;chr17:76932775-76937988|40|17.18|0.82|4.39|+|ENST00000428789|MGAT5B,MGAT5B;ENST00000563153.5_1_17:74940311-74944917:+|nuORF;ENST00000568598.1_1_17:74942385-74944917:+|nuORF	nc|ENSG00000167889|Q3V5L5-5|MGAT5B	nc|ENSG00000167889|Q3V5L5-5|MGAT5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.2827758789062	2	564.283254	1126.55196	2.0421	0.0011523	-0.43331	-0.00024451	1.6088	0.00090783	564.2826587158513	27.388	1.0441	27.133	26.454	27.498	-0.25465					44	23	3	0	0	0	0.76255	1	1551	1551		35.618	0	1	166990			57431	244	38394	38410	65103	65103					-0.00625810956330497
THLGITGVILL	11	Unmodified	_THLGITGVILL_					0	0	0		ENST00000471410.5_1_X:38422267-38546918:+|nuORF	ENST00000471410.5_1_X:38422267-38546918:+|nuORF	ENST00000471410.5_1_X:38422267-38546918:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8541870117188	2	568.855524	1135.69649	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.13	1	107.13	106.63	107.63	0								0	0	0	0.56276	1	11123	11123		39.253	15.73	1				57432	12242	38395	38411	65104	65104					0.1340743747095985
THLGLTLL	8	Unmodified	_THLGLTLL_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2515869140625	2	434.268553	866.522553	0.29397	0.00012766	0.46486	0.00020188	0.75883	0.00032954	434.2689840021753	80.53	0.25348	81.057	80.949	81.203	0.52676					8	5	2	0	0	0	0.4196	1	9299	9299		25.45	6.0902	1	117580			57433	15193	38396	38412	65105	65105					0.08395276765475046
THLHRVLR	8	Unmodified	_THLHRVLR_					0	0	0		chr17:75148671-75174752|41|14.27|0.5|4.85|-|1|JPT1,SUMO2|1	chr17:75148671-75174752|41|14.27|0.5|4.85|-|1|JPT1,SUMO2|1	chr17:75148671-75174752|41|14.27|0.5|4.85|-|1|JPT1,SUMO2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3138427734375	2	516.314692	1030.61483	-1.5619	-0.00080641	0.27971	0.00014442	-1.2821	-0.00066199	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.81548	2	12866	12237;12866		40.573	5.3719	1	4038100			57434	242	38397	38413	65106;65107	65107					0.10074799622339015
THLILRFKPN	10	Unmodified	_THLILRFKPN_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8692626953125	2	619.87204	1237.72953	-1.2246	-0.00075909	-2.9733	-0.001843	-4.1979	-0.0026021	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.85934	1	9730	9730		35.618	5.3006	1	6224400	+		57435	16117	38398	38414	65108	65108					0.1201706431365892
THLKKFEDKA	10	Unmodified	_THLKKFEDKA_					0	0	0			REV__ENST00000336032.3_1_6:89793930-89794134:+|nuORF	REV__ENST00000336032.3_1_6:89793930-89794134:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.8359375	2	608.837862	1215.66117	-0.14489	-8.8218E-05	-0.99259	-0.00060432	-1.1375	-0.00069254	608.8371154069557	110.53	1.2053	110.53	110.28	111.48	0					111	36	5	0	0	0	0.86698	1	11471	11471		28.081	1.3886	1	1502000	+		57436	25174	38399	38415	65109	65109					0.061967749431460106
THLKQQPIW	9	Unmodified	_THLKQQPIW_					0	0	0		nc|ENSG00000135709|O60268-2|KIAA0513;nc|ENSG00000135709|O60268-3|KIAA0513;ENSG00000135709|ENST00000683363|KIAA0513	nc|ENSG00000135709|O60268-2|KIAA0513	nc|ENSG00000135709|O60268-2|KIAA0513	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.843017578125	2	575.822015	1149.62948	0.93768	0.00053994	1.2302	0.00070838	2.1679	0.0012483	575.8234879526664	93.914	0.64445	93.959	93.449	94.093	0.045456					20	14	2	0	0	0	0.20789	1	9810	9810		24.203	0	1	65272			57437	4047	38400	38416	65110	65110					0.060648269798548426
THLLAAML	8	Unmodified	_THLLAAML_					0	0	0			REV__nc|ENSG00000100239|O75170-6|PPP6R2	REV__nc|ENSG00000100239|O75170-6|PPP6R2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25177001953125	2	435.249306	868.484059	0.52341	0.00022781	4.0632	0.0017685	4.5866	0.0019963	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.89457	1	7321	7321		37.028	2.8559	1	712390	+		57438	17156	38401	38417	65111	65111					0.04455647859299461
THLLGLPARR	10	Unmodified	_THLLGLPARR_					0	0	0		ENST00000603055.1_1_16:3614272-3617284:-|nuORF	ENST00000603055.1_1_16:3614272-3617284:-|nuORF	ENST00000603055.1_1_16:3614272-3617284:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3299560546875	2	567.348732	1132.68291	-0.49773	-0.00028239	-2.9716	-0.0016859	-3.4693	-0.0019683	567.3471586851085	93.949	0.1322	93.949	93.839	93.971	0					4	2	2	0	0	0	0.37624	1	9276	9276		31.53	5.9558	1	27476			57439	14420	38402	38418	65112	65112					0.1218762448236248
THLLIHSLML	10	Unmodified	_THLLIHSLML_					0	0	0		ENST00000498066.1_1_2:102484451-102486985:+|nuORF	ENST00000498066.1_1_2:102484451-102486985:+|nuORF	ENST00000498066.1_1_2:102484451-102486985:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.342529296875	2	589.341726	1176.6689	-0.67475	-0.00039766	2.4486	0.0014431	1.7739	0.0010454	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.86718	2	9437	9437;9603		27.882	1.1893	1	5429300			57440	12820	38403	38419	65113;65114	65113					0.08763210939059718
THLLIHSLML	10	Unmodified	_THLLIHSLML_					0	0	0		ENST00000498066.1_1_2:102484451-102486985:+|nuORF	ENST00000498066.1_1_2:102484451-102486985:+|nuORF	ENST00000498066.1_1_2:102484451-102486985:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3427124023438	2	589.341726	1176.6689	2.472	0.0014569	-0.53238	-0.00031375	1.9396	0.0011431	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.86718	1	10060	10060		27.882	0	1	16740000			57441	12820	38403	38419	65115	65115					0.08763210939059718
THLLIHSLML	10	Unmodified	_THLLIHSLML_					0	0	0		ENST00000498066.1_1_2:102484451-102486985:+|nuORF	ENST00000498066.1_1_2:102484451-102486985:+|nuORF	ENST00000498066.1_1_2:102484451-102486985:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3431396484375	2	589.341726	1176.6689	-0.65438	-0.00038565	2.6476	0.0015603	1.9932	0.0011747	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.86718	1	10115	10115		27.882	3.3631	1	16804000			57442	12820	38403	38419	65116	65116					0.08763210939059718
THLLKKFD	8	Unmodified	_THLLKKFD_					0	0	0		nc|ENSG00000164308|Q6P179-3|ERAP2;ENSG00000164308|ENST00000437043|ERAP2;ENST00000513084.5_1_5:96245508-96253306:+|nuORF	nc|ENSG00000164308|Q6P179-3|ERAP2	nc|ENSG00000164308|Q6P179-3|ERAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.29046630859375	2	501.292559	1000.57057	-1.6108	-0.00080747	-2.0389	-0.0010221	-3.6496	-0.0018295	501.2913530153025	99.317	1.4862	99.503	99.074	100.56	0.18582					77	34	4	0	0	0	0.88601	1	10288	10288		34.173	3.6689	1	592170			57443	5952	38404	38420	65117	65117					0.07030350685522535
THLLLPKELS	10	Unmodified	_THLLLPKELS_					0	0	0			REV__nc|ENSG00000196290|Q9GZT8-2|NIF3L1	REV__nc|ENSG00000196290|Q9GZT8-2|NIF3L1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8432006835938	2	575.845156	1149.67576	-0.49921	-0.00028747	-3.2743	-0.0018855	-3.7735	-0.002173	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.86218	1	8698	8698		32.812	2.4947	1	1518700	+		57444	23112	38405	38421	65118	65118					0.10690847091291289
THLLLPLKN	9	Unmodified	_THLLLPLKN_					0	0	0		ENST00000503484.5_1_5:43578677-43602973:-|nuORF	ENST00000503484.5_1_5:43578677-43602973:-|nuORF	ENST00000503484.5_1_5:43578677-43602973:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8273315429688	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.7932	1	10278	10278		23.042	1.3402	1	15330000			57445	12880	38406	38422	65119	65119					0.12214899127980061
THLLPHVL	8	Unmodified	_THLLPHVL_					0	0	0		nc|ENSG00000167716|Q562E7-4|WDR81;ENSG00000167716|ENST00000409644|WDR81;ENST00000464528.5_1_17:1630890-1639119:+|nuORF	nc|ENSG00000167716|Q562E7-4|WDR81	nc|ENSG00000167716|Q562E7-4|WDR81	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.28033447265625	2	465.281995	928.549437	-1.1036	-0.00051349	-3.1369	-0.0014595	-4.2405	-0.001973	465.28037254514356	89.207	2.109	89.207	88.71	90.819	0					110	48	4	0	0	0	0.81548	1	8602	8602		20.482	0.48506	1	1091500			57446	6321	38407	38423	65120	65120					0.08230385376668892
THLLQSVSLHS	11	Unmodified	_THLLQSVSLHS_					0	0	0		ENST00000609796.1_1_20:1460117-1472086:-|nuORF	ENST00000609796.1_1_20:1460117-1472086:-|nuORF	ENST00000609796.1_1_20:1460117-1472086:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.354736328125	2	611.332944	1220.65134	-0.23857	-0.00014585	-1.0758	-0.00065766	-1.3144	-0.00080351	611.3336510361851	95.807	0.60438	95.807	95.529	96.133	0					17	13	2	0	0	0	0.17431	1	9535	9535		18.262	0	1	70976			57447	14489	38408	38424	65121	65121					0.04983586937783002
THLLSTSRT	9	Unmodified	_THLLSTSRT_					0	0	0			REV__ENST00000216268.5_1_22:50247570-50277082:+|nuORF	REV__ENST00000216268.5_1_22:50247570-50277082:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.27960205078125	2	508.28018	1014.54581	-0.055639	-2.828E-05	0.18106	9.2031E-05	0.12542	6.3751E-05	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.69624	1	9175	9175		40.778	6.6056	1	1918800	+		57448	24128	38409	38425	65122	65122					0.03911670812158263
THLLYARWRLL	11	Unmodified	_THLLYARWRLL_					0	0	0			REV__nc|ENSG00000159753|Q6F5E8-2|CARMIL2	REV__nc|ENSG00000159753|Q6F5E8-2|CARMIL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.28326416015625	3	481.285739	1440.83539	-0.57975	-0.00027902	-3.3427	-0.0016088	-3.9225	-0.0018878	481.28359993784676	102.78	2.1606	102.82	102.1	104.26	0.04319					140	52	5	0	0	0	0.76892	2	11139	11139;11188		17.833	4.3252	1	978410	+		57449	20679	38410	38426	65123;65124	65123					0.13260400159106212
THLPAELVPL	10	Unmodified	_THLPAELVPL_					0	0	0			REV__ENST00000330292.4_17:80208760-80208973:+|nuORF	REV__ENST00000330292.4_17:80208760-80208973:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3168334960938	2	545.318774	1088.623	-0.68757	-0.00037494	-3.0506	-0.0016636	-3.7382	-0.0020385	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.85934	1	8546	8546		35.618	2.8059	1	3608000	+		57450	25108	38411	38427	65125	65125					0.08222889028479585
THLPAELVPL	10	Unmodified	_THLPAELVPL_					0	0	0			REV__ENST00000330292.4_17:80208760-80208973:+|nuORF	REV__ENST00000330292.4_17:80208760-80208973:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3165893554688	2	545.318774	1088.623	-1.3538	-0.00073823	-2.3594	-0.0012866	-3.7132	-0.0020249	545.3173611759861	88.348	2.3609	88.819	87.443	89.803	0.47069					188	57	4	0	0	0	0.8608	1	10476	10476		34.173	1.3601	1	5184000	+		57451	25108	38411	38427	65126	65126					0.08222889028479585
THLPMRLV	8	Unmodified	_THLPMRLV_					0	0	0			REV__ENSG00000163811|ENST00000407426|WDR43	REV__ENSG00000163811|ENST00000407426|WDR43	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.73779296875	2	483.781305	965.548056	-0.36637	-0.00017724	-4.205	-0.0020343	-4.5714	-0.0022115	483.77905838671165	80.473	0.3393	81	80.822	81.161	0.52676					10	7	2	0	0	0	0.4196	1	9266	9266		12.959	0	1	64153	+		57452	20975	38412	38428	65127	65127					0.06390428016243277
THLPVLVLSP	10	Unmodified	_THLPVLVLSP_					0	0	0			REV__ENST00000497242.1_1_X:153631168-153631932:-|nuORF	REV__ENST00000497242.1_1_X:153631168-153631932:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.32666015625	2	538.329142	1074.64373	-0.15636	-8.4174E-05	-4.0212	-0.0021647	-4.1776	-0.0022489	538.3269075153179	101.16	2.8222	101.19	100.44	103.26	0.031036					310	67	7	0	0	0	0.8608	1	10826	10826		34.173	2.2177	1	74691000	+		57453	16199	38413	38429	65128	65128					0.10939479408125408
THLQRNLRI	9	Unmodified	_THLQRNLRI_					0	0	0			REV__ENSG00000181518|ENST00000641687|OR8D4	REV__ENSG00000181518|ENST00000641687|OR8D4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8428955078125	2	575.843813	1149.67307	0.80402	0.00046299	-2.4364	-0.001403	-1.6324	-0.00094001	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.76764	1	9470	9470		34.173	2.6427	1	6947200	+		57454	22463	38414	38430	65129	65129					0.10422436476960684
THLRHPAIRVL	11	Unmodified	_THLRHPAIRVL_					0	0	0		ENST00000470520.5_1_1:1244480-1246298:+|nuORF;ENSG00000169972|ENST00000379031|PUSL1	ENST00000470520.5_1_1:1244480-1246298:+|nuORF	ENST00000470520.5_1_1:1244480-1246298:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.273193359375	3	438.270201	1311.78877	2.7278	0.0011955	3.5847	0.0015711	6.3125	0.0027666	438.27166879991887	107.29	1.1275	107.26	106.75	107.88	-0.034134					106	26	5	0	0	0	0.76251	1	11918	11918		19.263	1.4295	1	5019700			57455	6548	38415	38431	65130	65130					0.14534960327819135
THLRPDRVAL	10	Unmodified	_THLRPDRVAL_					0	0	0			REV__ENSG00000237988|ENST00000641137|OR2I1P	REV__ENSG00000237988|ENST00000641137|OR2I1P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3432006835938	2	589.343646	1176.67274	-0.6745	-0.00039751	-0.65118	-0.00038377	-1.3257	-0.00078128	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.86471	1	10050	10050		30.318	0	1	16185000	+		57456	23799	38416	38432	65131	65131					0.09147016757151505
THLRPLLLL	9	Unmodified	_THLRPLLLL_					0	0	0			REV__nc|ENSG00000179869|Q86UQ4|ABCA13	REV__nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3267211914062	2	538.352951	1074.69135	0.83996	0.00045219	4.2884	0.0023087	5.1284	0.0027609	538.354746687903	100.99	0.36151	101.14	101.05	101.41	0.14352					11	8	2	0	0	0	0.20789	1	10584	10584		18.324	6.1176	1	152490	+		57457	22360	38417	38433	65132	65132					0.15699178398995173
THLRQHQSL	9	Unmodified	_THLRQHQSL_					0	0	0			REV__ENSG00000197050|ENST00000337995|ZNF420	REV__ENSG00000197050|ENST00000337995|ZNF420	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8565673828125	2	560.304521	1118.59449	3.0044	0.0016834	4.2452	0.0023786	7.2496	0.004062	560.3067464265689	101.03	0.61082	100.97	100.71	101.32	-0.052116					23	14	2	0	0	0	0.20789	1	10969	10969		12.812	0	1	105780	+		57458	23189	38418	38434	65133	65133					0.039935841718943266
THLRQHTKL	9	Unmodified	_THLRQHTKL_					0	0	0			REV__nc|ENSG00000165244|Q7RTV3-2|ZNF367	REV__nc|ENSG00000165244|Q7RTV3-2|ZNF367	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3299560546875	2	567.330539	1132.64652	1.497	0.00084932	-2.8559	-0.0016202	-1.3589	-0.00077092	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.76255	1	9611	9611		35.618	0	1	15259000	+		57459	21167	38419	38435	65134	65134					0.08550747585650242
THLRRHII	8	Unmodified	_THLRRHII_					0	0	0			REV__nc|ENSG00000198538|P17035-2|ZNF28	REV__nc|ENSG00000198538|P17035-2|ZNF28	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3035888671875	2	523.322517	1044.63048	0.71409	0.0003737	-0.13804	-7.224E-05	0.57605	0.00030146	523.3215821771173	88.42	1.0687	88.571	87.941	89.01	0.15055					40	25	2	0	0	0	0.4196	1	8810	8810		12.207	0	1	114590	+		57460	23336	38420	38436	65135	65135					0.1099508613940543
THLRSDVQI	9	Unmodified	_THLRSDVQI_					0	0	0			REV__ENSG00000279301|ENST00000641193|OR2T11	REV__ENSG00000279301|ENST00000641193|OR2T11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.7984619140625	2	534.793455	1067.57236	0.13362	7.1457E-05	3.8722	0.0020708	4.0058	0.0021423	534.7954915145849	55.924	0.60534	56.325	55.991	56.596	0.40102					30	16	2	0	0	0	0.51592	1	5768	5768		51.193	1.7511	1	920280	+		57461	24040	38421	38437	65136	65136					0.04127359703466027
THLSLQVGFGP	11	Unmodified	_THLSLQVGFGP_					0	0	0			REV__ENSG00000186190|ENST00000375494|BPIFB3	REV__ENSG00000186190|ENST00000375494|BPIFB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3109741210938	2	578.31148	1154.60841	-0.93812	-0.00054253	-0.66211	-0.00038291	-1.6002	-0.00092543	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.65746	1	12076	12076		37.812	3.639	1	3649700	+		57462	22832	38422	38438	65137	65137					0.03728816880334307
THLSSLKRHV	10	Unmodified	_THLSSLKRHV_					0	0	0		ENSG00000171970|ENST00000306908|ZNF57	ENSG00000171970|ENST00000306908|ZNF57	ENSG00000171970|ENST00000306908|ZNF57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.34228515625	2	589.343646	1176.67274	0.81285	0.00047905	-2.3819	-0.0014037	-1.569	-0.00092468	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.8651	1	9405	9405		25.574	0	1	6450100			57463	6729	38423	38439	65138	65138					0.09147016757128767
THLVLHKL	8	Unmodified	_THLVLHKL_					0	0	0			REV__chr1:172144437-172144967|26|12.96|0.02|9.49|-|0|DNM3OS,None|2	REV__chr1:172144437-172144967|26|12.96|0.02|9.49|-|0|DNM3OS,None|2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.80108642578125	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.87922	3	9579	9482;9511;9579		33.516	5.2613	1	7439400	+		57464	15429	38424	38440	65139;65140;65141	65141					0.1102236078503438
THLVLHKL	8	Unmodified	_THLVLHKL_					0	0	0			REV__chr1:172144437-172144967|26|12.96|0.02|9.49|-|0|DNM3OS,None|2	REV__chr1:172144437-172144967|26|12.96|0.02|9.49|-|0|DNM3OS,None|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.80059814453125	2	480.803094	959.591636	-0.54823	-0.00026359	-4.2519	-0.0020443	-4.8001	-0.0023079	480.80093903656257	95.17	4.1898	95.217	94.619	98.809	0.046982					308	97	5	0	0	0	0.884	2	10084	10072;10084		42.474	1.9018	1	18729000	+		57465	15429	38424	38440	65142;65143	65143					0.1102236078503438
THLVLHKL	8	Unmodified	_THLVLHKL_					0	0	0			REV__chr1:172144437-172144967|26|12.96|0.02|9.49|-|0|DNM3OS,None|2	REV__chr1:172144437-172144967|26|12.96|0.02|9.49|-|0|DNM3OS,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	480.80078125	2	480.803094	959.591636	-0.79097	-0.0003803	-4.038	-0.0019415	-4.829	-0.0023218	480.80105529568283	95.059	4.1	95.291	94.653	98.753	0.23103					305	96	5	0	0	0	0.884	2	9686	9686;9766		40.573	6.7195	1	18644000	+		57466	15429	38424	38440	65144;65145	65144					0.1102236078503438
THLVLHKL	8	Unmodified	_THLVLHKL_					0	0	0			REV__chr1:172144437-172144967|26|12.96|0.02|9.49|-|0|DNM3OS,None|2	REV__chr1:172144437-172144967|26|12.96|0.02|9.49|-|0|DNM3OS,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8008117675781	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.87922	3	9674	9663;9674;9734		47.916	14.423	1	17379000	+		57467	15429	38424	38440	65146;65147;65148	65147					0.1102236078503438
THLVPSKKAKL	11	Unmodified	_THLVPSKKAKL_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3558349609375	2	611.387522	1220.76049	0.86495	0.00052882	-0.94139	-0.00057556	-0.076446	-4.6738E-05	611.387121908718	95.579	0.42662	95.742	95.636	96.062	0.16316					13	9	2	0	0	0	0.17339	1	9835	9835		19.263	2.5453	1	87984	+		57468	22085	38425	38441	65149	65149					0.15894217627896978
THLVSVQIPL	10	Unmodified	_THLVSVQIPL_					0	0	0			REV__ENST00000596456.1_1_19:40948326-40950148:-|nuORF	REV__ENST00000596456.1_1_19:40948326-40950148:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.83056640625	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.8545	2	8887	8850;8887		36.447	5.9431	1	3935500	+		57469	29258	38426	38442	65150;65151	65151					0.10094577919812764
THLVSVQIPL	10	Unmodified	_THLVSVQIPL_					0	0	0			REV__ENST00000596456.1_1_19:40948326-40950148:-|nuORF	REV__ENST00000596456.1_1_19:40948326-40950148:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8295288085938	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.8651	1	8693	8693		25.574	4.6271	1	2008100	+		57470	29258	38426	38442	65152	65152					0.10094577919812764
THMAELHHL	9	Oxidation (M)	_THM(Oxidation (M))AELHHL_		THM(1)AELHHL		THM(82)AELHHL	0	0	1			REV__ENST00000456360.5_1_Y:23556925-23559248:-|nuORF	REV__ENST00000456360.5_1_Y:23556925-23559248:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7839965820312	2	552.766383	1103.51821	-0.10836	-5.9899E-05	-0.74008	-0.00040909	-0.84844	-0.00046899	552.765617561331	74.44	0.61987	74.999	74.542	75.162	0.5589					26	14	3	0	0	0	0.20012	1	8380	8380		82.305	32.863	1	162240	+		57471	26957	38427	38443	65153	65153		409			-0.029405557197605958
THMFYASA	8	Unmodified	_THMFYASA_					0	0	0		ENSG00000151117|ENST00000280734|TMEM86A	ENSG00000151117|ENST00000280734|TMEM86A	ENSG00000151117|ENST00000280734|TMEM86A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2537841796875	2	464.205096	926.395638	-1.0583	-0.00049128	-4.2012	-0.0019502	-5.2595	-0.0024415	464.2019718085839	83.137	1.3669	83.302	82.682	84.049	0.1651					50	31	3	0	0	0	0.4196	1	8099	8099		47.916	15.103	1	59847			57472	5095	38428	38444	65154	65154					-0.07050392451174048
THMSCFFE	8	Unmodified	_THMSCFFE_					0	0	0			REV__ENSG00000165164|ENST00000378653|CFAP47	REV__ENSG00000165164|ENST00000378653|CFAP47	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.86181640625	2	501.196413	1000.37827	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.156	1	75.156	74.656	75.656	0								0	0	0	0.29245	1	6798	6798		30.504	0.6621	1		+		57473	21154	38429	38445	65155	65155					-0.12190056048473252
THNFLGPLSLG	11	Unmodified	_THNFLGPLSLG_					0	0	0		chr19:58312403-58314748|54|16.54|0.0|20.66|+|2|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,donor,+,58311249,58312403|None,ZNF8-ERVK3-1|3	chr19:58312403-58314748|54|16.54|0.0|20.66|+|2|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,donor,+,58311249,58312403|None,ZNF8-ERVK3-1|3	chr19:58312403-58314748|54|16.54|0.0|20.66|+|2|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,donor,+,58311249,58312403|None,ZNF8-ERVK3-1|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3106079101562	2	578.31148	1154.60841	-0.93812	-0.00054253	-0.66211	-0.00038291	-1.6002	-0.00092543	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.41466	1	12008	12008		58.23	22.612	1	3649700			57474	299	38430	38446	65156	65156					0.03728816880334307
THNGRLVIKLD	11	Unmodified	_THNGRLVIKLD_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3687744140625	2	633.369861	1264.72517	-0.11908	-7.5423E-05	-0.90029	-0.00057022	-1.0194	-0.00064564	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.638	6	9670	9458;9566;9578;9613;9670;9682		40.058	7.2458	1	2722900	+		57475	23536	38431	38447	65157;65158;65159;65160;65161;65162	65161					0.1033955510006308
THNGRLVIKLD	11	Unmodified	_THNGRLVIKLD_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3699340820312	2	633.369861	1264.72517	-0.087569	-5.5464E-05	-0.98413	-0.00062332	-1.0717	-0.00067878	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.67041	1	9718	9718		36.318	2.396	1	7059800	+		57476	23536	38431	38447	65163	65163					0.1033955510006308
THNGRLVIKLD	11	Unmodified	_THNGRLVIKLD_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3700561523438	2	633.369861	1264.72517	1.4675	0.00092945	-2.7221	-0.0017241	-1.2546	-0.00079462	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.59831	2	9745	9745;9887		35.152	2.4355	1	5460600	+		57477	23536	38431	38447	65164;65165	65164					0.1033955510006308
THNGRLVIKLD	11	Unmodified	_THNGRLVIKLD_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3687744140625	2	633.369861	1264.72517	1.4714	0.00093196	-2.6119	-0.0016543	-1.1404	-0.0007223	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.71394	1	10061	10061		32.751	4.8683	1	11430000	+		57478	23536	38431	38447	65166	65166					0.1033955510006308
THNGRLVIKLD	11	Unmodified	_THNGRLVIKLD_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3684692382812	2	633.369861	1264.72517	0.88638	0.00056141	-2.1201	-0.0013428	-1.2337	-0.0007814	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.61369	4	9706	9706;9718;9878;9902		42.864	10.873	1	5166300	+		57479	23536	38431	38447	65167;65168;65169;65170	65167					0.1033955510006308
THNGRLVIKLD	11	Unmodified	_THNGRLVIKLD_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3685302734375	2	633.369861	1264.72517	1.4972	0.00094828	-2.4939	-0.0015795	-0.99665	-0.00063125	633.3681812370636	95.449	2.3087	95.87	94.551	96.859	0.42051					197	55	4	0	0	0	0.61369	2	11454	11454;11556		42.864	14.783	1	3612700	+		57480	23536	38431	38447	65171;65172	65171					0.1033955510006308
THNGRLVIKLD	11	Unmodified	_THNGRLVIKLD_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3690795898438	2	633.369861	1264.72517	1.5976	0.0010119	-2.7562	-0.0017457	-1.1585	-0.00073377	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.72891	1	11776	11776		29.551	2.8578	1	10012000	+		57481	23536	38431	38447	65173	65173					0.1033955510006308
THNILLLKKM	10	Unmodified	_THNILLLKKM_					0	0	0			REV__ENST00000231061.8_1_5:151042021-151042093:-|nuORF	REV__ENST00000231061.8_1_5:151042021-151042093:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.872314453125	2	605.870651	1209.72675	-0.046166	-2.7971E-05	2.3267	0.0014097	2.2805	0.0013817	605.8718844200029	100.18	2.006	100.22	99.762	101.77	0.046349					129	46	5	0	0	0	0.8651	1	10758	10758		25.574	0	1	1666000	+		57482	24194	38432	38448	65174	65174					0.13027472864496303
THNIVAKQVPD	11	Unmodified	_THNIVAKQVPD_					0	0	0			REV__nc|ENSG00000144331|Q569K4-2|ZNF385B	REV__nc|ENSG00000144331|Q569K4-2|ZNF385B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3565063476562	2	611.332944	1220.65134	0.20721	0.00012667	4.4652	0.0027297	4.6724	0.0028564	611.3345875342845	96.136	0.99128	96.183	95.878	96.87	0.047798					31	22	2	0	0	0	0.17415	1	10252	10252		33.922	16.454	1	101530	+		57483	19881	38433	38449	65175	65175					0.04983586937760265
THNLRSTEVV	10	Unmodified	_THNLRSTEVV_					0	0	0			REV__nc|ENSG00000162782|Q8NAT2|TDRD5	REV__nc|ENSG00000162782|Q8NAT2|TDRD5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3103637695312	2	578.309469	1154.60439	-0.30541	-0.00017662	2.2173	0.0012823	1.9119	0.0011057	578.3105993918314	110.37	1.6265	110.37	110.02	111.65	0					155	51	5	0	0	0	0.8545	1	11461	11461		36.447	3.6343	1	2787700	+		57484	20848	38434	38450	65176	65176					0.033267273866158575
THNLRSTEVV	10	Unmodified	_THNLRSTEVV_					0	0	0			REV__nc|ENSG00000162782|Q8NAT2|TDRD5	REV__nc|ENSG00000162782|Q8NAT2|TDRD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3106079101562	2	578.309469	1154.60439	-0.93812	-0.00054253	2.8159	0.0016285	1.8778	0.0010859	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.80179	1	12016	12016		39.253	5.0803	1	3649700	+		57485	20848	38434	38450	65177	65177					0.033267273866158575
THNLRSTEVV	10	Unmodified	_THNLRSTEVV_					0	0	0			REV__nc|ENSG00000162782|Q8NAT2|TDRD5	REV__nc|ENSG00000162782|Q8NAT2|TDRD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	578.3104248046875	2	578.309469	1154.60439	3.0835	0.0017832	-1.3488	-0.00078002	1.7347	0.0010032	578.3084884476433	110.4	1.8051	110.37	110.09	111.9	-0.027641					157	59	5	0	0	0	0.8608	1	12204	12204		34.173	2.6427	1	3259900	+		57486	20848	38434	38450	65178	65178					0.033267273866158575
THNLRSTEVV	10	Unmodified	_THNLRSTEVV_					0	0	0			REV__nc|ENSG00000162782|Q8NAT2|TDRD5	REV__nc|ENSG00000162782|Q8NAT2|TDRD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	578.3101806640625	2	578.309469	1154.60439	0.63739	0.00036861	1.0393	0.00060106	1.6767	0.00096967	578.3098719113019	110.31	1.8374	110.34	110.1	111.94	0.031738					174	64	3	0	0	0	0.8545	2	12060	12060;12075		36.447	2.2742	1	3242500	+		57487	20848	38434	38450	65179;65180	65179					0.033267273866158575
THNLRSTEVV	10	Unmodified	_THNLRSTEVV_					0	0	0			REV__nc|ENSG00000162782|Q8NAT2|TDRD5	REV__nc|ENSG00000162782|Q8NAT2|TDRD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.3099975585938	2	578.309469	1154.60439	-1.36	-0.00078649	3.1958	0.0018482	1.8358	0.0010617	578.3111160686906	110.18	1.4068	110.19	109.95	111.35	0.0060425					125	50	3	0	0	0	0.85934	3	11737	11737;11747;11759		35.618	4.7437	1	2534300	+		57488	20848	38434	38450	65181;65182;65183	65181					0.033267273866158575
THNLWLLSFL	10	Unmodified	_THNLWLLSFL_					0	0	0		nc|ENSG00000095970|Q9NZC2-2|TREM2;nc|ENSG00000095970|Q9NZC2-3|TREM2;ENSG00000095970|ENST00000373113|TREM2	nc|ENSG00000095970|Q9NZC2-2|TREM2	nc|ENSG00000095970|Q9NZC2-2|TREM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	622.345703125	2	622.345323	1242.67609	-1.2166	-0.00075714	3.6166	0.0022508	2.4001	0.0014937	622.3475745875962	95.767	2.795	95.97	95.191	97.986	0.20242					140	65	3	0	0	0	0.85934	1	9876	9876		35.618	11.099	1	410920			57489	1735	38435	38451	65184	65184					0.06446266811144596
THNPTLKKIR	10	Unmodified	_THNPTLKKIR_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.366455078125	2	604.367121	1206.71969	-0.16822	-0.00010167	-0.91026	-0.00055013	-1.0785	-0.0006518	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.76096	6	10879	10783;10879;10916;10953;11073;11085		41.427	5.9431	1	47715000	+		57490	29615	38436	38452	65185;65186;65187;65188;65189;65190	65186					0.12459876308275852
THNPTLKKIR	10	Unmodified	_THNPTLKKIR_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3662109375	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.78666	5	11403	11295;11403;11416;11586;11598		40.058	7.3076	1	63350000	+		57491	29615	38436	38452	65191;65192;65193;65194;65195	65192					0.12459876308275852
THNPTLKKIR	10	Unmodified	_THNPTLKKIR_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.366943359375	2	604.367121	1206.71969	3.2045	0.0019367	-4.3338	-0.0026192	-1.1294	-0.00068255	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.85633	4	11775	11474;11752;11775;11799		33.922	6.0394	1	63446000	+		57492	29615	38436	38452	65196;65197;65198;65199	65198					0.12459876308275852
THNPTLKKIR	10	Unmodified	_THNPTLKKIR_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3666381835938	2	604.367121	1206.71969	-0.11879	-7.1791E-05	-0.91781	-0.0005547	-1.0366	-0.00062649	604.3664873778177	104.57	3.6515	104.61	103.96	107.61	0.039864					410	86	7	0	0	0	0.86698	1	11647	11647		28.081	4.5588	1	64334000	+		57493	29615	38436	38452	65200	65200					0.12459876308275852
THNPTLKKIR	10	Unmodified	_THNPTLKKIR_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3663940429688	2	604.367121	1206.71969	1.0484	0.00063359	-2.1061	-0.0012728	-1.0577	-0.00063923	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.86272	2	11058	11058;11254		29.17	2.1227	1	105850000	+		57494	29615	38436	38452	65201;65202	65201					0.12459876308275852
THNPTLKKIR	10	Unmodified	_THNPTLKKIR_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3663940429688	2	604.367121	1206.71969	0.90473	0.00054679	-2.0534	-0.001241	-1.1487	-0.00069423	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.86587	1	11086	11086		29.17	0	1	105740000	+		57495	29615	38436	38452	65203	65203					0.12459876308275852
THNPTLKKIR	10	Unmodified	_THNPTLKKIR_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3665161132812	2	604.367121	1206.71969	-1.2751	-0.0007706	0.20453	0.00012361	-1.0705	-0.00064699	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.86106	1	11120	11120		33.922	8.3476	1	103250000	+		57496	29615	38436	38452	65204	65204					0.12459876308275852
THNPTLKKIR	10	Unmodified	_THNPTLKKIR_					0	0	0			REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	REV__L1PA8A_dup160|chr1:247133953-247136664:+|1.5993221959106625|0.4971293307696565|1.69|63.0|73|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3640747070312	2	604.367121	1206.71969	3.6458	0.0022034	-4.4074	-0.0026637	-0.76167	-0.00046033	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.8505	2	12997	12704;12997		36.447	6.129	1	5883900	+		57497	29615	38436	38452	65205;65206	65206					0.12459876308275852
THNQHHNYN	9	Unmodified	_THNQHHNYN_					0	0	0			REV__ENST00000323571.8_1_17:38438263-38438389:+|nuORF	REV__ENST00000323571.8_1_17:38438263-38438389:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.7506713867188	2	582.75011	1163.48567	0.092266	5.3768E-05	-1.2947	-0.0007545	-1.2024	-0.00070073	582.7491558841364	24.01	0.48651	23.964	23.68	24.167	-0.04598					19	11	2	0	0	0	0.76255	1	903	903		35.618	2.8059	1	28101	+		57498	25033	38437	38453	65207	65207					-0.08953626798370351
THNQTLKKIR	10	Unmodified	_THNQTLKKIR_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|175|3|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|175|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8692016601562	2	619.870028	1237.7255	1.2689	0.00078657	-2.206	-0.0013675	-0.93712	-0.00058089	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.86218	1	9856	9856		32.812	1.2826	1	6493200	+		57499	29595	38438	38454	65208	65208					0.11614974819940471
THPGPVSSPVL	11	Unmodified	_THPGPVSSPVL_					0	0	0			REV__ENST00000568207.5_1_15:75315958-75337059:+|nuORF	REV__ENST00000568207.5_1_15:75315958-75337059:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167114257812	2	545.798206	1089.58186	0.16363	8.9307E-05	-3.6391	-0.0019862	-3.4755	-0.0018969	545.7961780421086	92.246	2.4415	92.467	91.506	93.948	0.22157					93	57	2	0	0	0	0.17551	1	9500	9500		37.812	9.9293	1	168060	+		57500	28896	38439	38455	65209	65209					0.04065127988997119
THPHQVGRK	9	Unmodified	_THPHQVGRK_					0	0	0		ENST00000426003.1_1_3:189713229-189839395:-|nuORF	ENST00000426003.1_1_3:189713229-189839395:-|nuORF	ENST00000426003.1_1_3:189713229-189839395:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.293701171875	2	530.293956	1058.57336	-0.73575	-0.00039016	-0.28765	-0.00015254	-1.0234	-0.0005427	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.78983	1	8895	8895		27.882	0	1	1390700			57501	11543	38440	38456	65210	65210					0.0464161886304737
THPLIRLASR	10	Unmodified	_THPLIRLASR_					0	0	0		nc|ENSG00000183580|Q9UJT9-2|FBXL7;ENSG00000183580|ENST00000504595|FBXL7	nc|ENSG00000183580|Q9UJT9-2|FBXL7	nc|ENSG00000183580|Q9UJT9-2|FBXL7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3535766601562	2	582.354014	1162.69348	0.15817	9.2113E-05	-1.1126	-0.00064794	-0.95444	-0.00055582	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.86587	1	11522	11522		29.17	1.0886	1	78004000			57502	7543	38441	38457	65211	65211					0.11863607136797327
THPPSEDR	8	Unmodified	_THPPSEDR_					0	0	0		ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	ENSG00000073614|ENST00000399788|KDM5A	ENSG00000073614|ENST00000399788|KDM5A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7609558105469	2	469.719956	937.425358	-1.0648	-0.00050017	1.3884	0.00065216	0.32357	0.00015199	469.7205690334191	36.447	0.36016	36.47	36.228	36.588	0.023621					13	10	2	0	0	0	0.4196	1	1975	1975		18.324	0	1	63030			57503	1294	38442	38458	65212	65212					-0.04585737181469085
THPRLNRLI	9	Unmodified	_THPRLNRLI_					0	0	0			REV__ENSG00000139304|ENST00000644991|PTPRQ	REV__ENSG00000139304|ENST00000644991|PTPRQ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3402709960938	2	560.340907	1118.66726	0.86176	0.00048288	-2.22	-0.001244	-1.3582	-0.00076107	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.7932	1	11032	11032		24.203	1.1603	1	126390000	+		57504	19532	38443	38459	65213	65213					0.11267337965318802
THPRLRLIQ	9	Unmodified	_THPRLRLIQ_					0	0	0			REV__nc|ENSG00000205336|Q9Y653-5|ADGRG1	REV__nc|ENSG00000205336|Q9Y653-5|ADGRG1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3286743164062	2	567.348732	1132.68291	-1.2033	-0.0006827	-1.0687	-0.00060634	-2.272	-0.001289	567.3477100201864	95.746	1.9744	95.812	94.508	96.482	0.06591					79	46	2	0	0	0	0.20789	1	9875	9875		34.173	22.662	1	85392	+		57505	23554	38444	38460	65214	65214					0.1218762448236248
THPRVPRR	8	Unmodified	_THPRVPRR_					0	0	0			REV__nc|ENSG00000107959|Q5JRX3-3|PITRM1	REV__nc|ENSG00000107959|Q5JRX3-3|PITRM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80377197265625	2	509.804491	1017.59443	-0.054339	-2.7702E-05	-1.4565	-0.00074254	-1.5109	-0.00077024	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.85277	1	8914	8914		25.45	0	1	2906900	+		57506	17686	38445	38461	65215	65215					0.08633628962559214
THPSLINKN	9	Unmodified	_THPSLINKN_					0	0	0			REV__nc|ENSG00000158488|P15812-8|CD1E	REV__nc|ENSG00000158488|P15812-8|CD1E	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2817993164062	2	512.282723	1022.55089	-0.88857	-0.0004552	-1.7897	-0.00091686	-2.6783	-0.0013721	512.2817341917631	86.454	3.0125	86.454	85.618	88.63	0					129	69	2	0	0	0	0.78983	1	8303	8303		27.882	2.3082	1	265310	+		57507	20610	38446	38462	65216	65216					0.04051974674769099
THPSRKGG	8	Unmodified	_THPSRKGG_					0	0	0			REV__ENST00000467242.1_1_2:30455069-30455135:+|nuORF	REV__ENST00000467242.1_1_2:30455069-30455135:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2273864746094	2	420.227751	838.440949	-0.18765	-7.8855E-05	0.54835	0.00023043	0.36071	0.00015158	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.884	1	7581	7581		33.516	0	1	743780	+		57508	27151	38447	38463	65217	65217					0.015265941262441629
THPSRKGG	8	Unmodified	_THPSRKGG_					0	0	0			REV__ENST00000467242.1_1_2:30455069-30455135:+|nuORF	REV__ENST00000467242.1_1_2:30455069-30455135:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2274475097656	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.87479	1	7566	7566		30.504	2.2494	1	831720	+		57509	27151	38447	38463	65218	65218					0.015265941262441629
THPSRKGG	8	Unmodified	_THPSRKGG_					0	0	0			REV__ENST00000467242.1_1_2:30455069-30455135:+|nuORF	REV__ENST00000467242.1_1_2:30455069-30455135:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.2276306152344	2	420.227751	838.440949	0.39025	0.000164	-0.22921	-9.6321E-05	0.16104	6.7675E-05	420.2275761359418	78.73	4.4768	79.141	77.509	81.986	0.4106					178	106	2	0	0	0	0.93293	1	8921	8921		51.335	17.82	1	423290	+		57510	27151	38447	38463	65219	65219					0.015265941262441629
THPVGWFGGVL	11	Unmodified	_THPVGWFGGVL_					0	0	0			REV__nc|ENSG00000214900|Q8WXQ3|LINC01599	REV__nc|ENSG00000214900|Q8WXQ3|LINC01599	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	584.356689453125	2	585.308741	1168.60293	-1.3373	-0.00078276	4.4264	0.0025908	3.089	0.001808	585.3114814233257	92.69	0.16922	92.882	92.735	92.904	0.19239					5	3	2	0	0	0	0.1729	1	9318	9318		19.997	0	1	38444	+		57511	30201	38448	38464	65220	65220					0.02537138088541724
THQHVRKNN	9	Unmodified	_THQHVRKNN_					0	0	0		ENSG00000165923|ENST00000525123|AGBL2;ENST00000529712.5_1_11:47690447-47736202:-|nuORF	ENSG00000165923|ENST00000525123|AGBL2	ENSG00000165923|ENST00000525123|AGBL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3297729492188	2	567.29977	1132.58499	0.47707	0.00027064	-0.93009	-0.00052764	-0.45303	-0.000257	567.2990950147963	90.034	0.47376	90.247	89.823	90.296	0.21272					16	10	2	0	0	0	0.20789	1	8957	8957		32.812	10.233	1	76652			57512	6138	38449	38465	65221	65221					0.02399815886383294
THQKKKLEGQI	11	Unmodified	_THQKKKLEGQI_					0	0	0		nc|ENSG00000173391|P78380-2|OLR1;nc|ENSG00000173391|P78380-3|OLR1;ENSG00000173391|ENST00000309539|OLR1	nc|ENSG00000173391|P78380-2|OLR1	nc|ENSG00000173391|P78380-2|OLR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2567443847656	3	437.257738	1308.75138	-0.16089	-7.0349E-05	-0.76824	-0.00033592	-0.92913	-0.00040627	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.74022	1	10668	10668		24.232	0.85391	1	727380			57513	6854	38450	38466	65222	65222					0.10935824271564343
THQKKKLEGQI	11	Unmodified	_THQKKKLEGQI_					0	0	0		nc|ENSG00000173391|P78380-2|OLR1;nc|ENSG00000173391|P78380-3|OLR1;ENSG00000173391|ENST00000309539|OLR1	nc|ENSG00000173391|P78380-2|OLR1	nc|ENSG00000173391|P78380-2|OLR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2562561035156	3	437.257738	1308.75138	0.72446	0.00031677	-1.611	-0.00070442	-0.88654	-0.00038765	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.75906	1	10217	10217		20.03	1.4994	1	670840			57514	6854	38450	38466	65223	65223					0.10935824271564343
THQLSLDAFLV	11	Unmodified	_THQLSLDAFLV_					0	0	0		nc|ENSG00000126226|Q5JVF3-3|PCID2;nc|ENSG00000126226|Q5JVF3-2|PCID2;ENSG00000126226|ENST00000337344|PCID2;nc|ENSG00000126226|Q5JVF3-4|PCID2	nc|ENSG00000126226|Q5JVF3-3|PCID2	nc|ENSG00000126226|Q5JVF3-3|PCID2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3362426757812	2	622.337695	1242.66084	-0.27733	-0.0001726	-1.9307	-0.0012016	-2.208	-0.0013741	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.72918	2	12047	12047;12075		26.693	4.733	1	419280			57515	3446	38451	38467	65224;65225	65224					0.0492135522326862
THQPRRLL	8	Unmodified	_THQPRRLL_					0	0	0		ENST00000564783.5_3_16:57673452-57675555:+|nuORF;ENST00000562804.5_1_16:57673380-57675539:+|nuORF	ENST00000564783.5_3_16:57673452-57675555:+|nuORF	ENST00000564783.5_3_16:57673452-57675555:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.22259521484375	2	510.8067	1019.59885	-0.6326	-0.00032314	-0.48251	-0.00024647	-1.1151	-0.00056961	510.8063356950542	88.56	0.43739	89.031	88.758	89.195	0.47068					13	10	2	0	0	0	0.4196	1	10490	10490		18.324	6.1176	1	53468			57516	13854	38452	38468	65226	65226					0.08983093385484153
THRFRHKSS	9	Unmodified	_THRFRHKSS_					0	0	0			REV__ENST00000498794.1_1_3:49053967-49054132:-|nuORF	REV__ENST00000498794.1_1_3:49053967-49054132:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	578.8115234375	2	578.310138	1154.60572	0.87917	0.00050843	-0.063404	-3.6667E-05	0.81576	0.00047176	578.3098591180509	110.17	1.6008	110.24	110.06	111.66	0.073685					154	53	3	0	0	0	0.77696	1	11938	11938		31.53	3.4483	1	2193800	+		57517	27258	38453	38469	65227	65227					0.03460406266049176
THRGAVAL	8	Unmodified	_THRGAVAL_					0	0	0		ENST00000485732.5_1_9:139748116-139749417:+|nuORF;nc|ENSG00000177943|Q6UXC1-3|MAMDC4;ENSG00000177943|ENST00000317446|MAMDC4;nc|ENSG00000177943|Q6UXC1|MAMDC4	ENST00000485732.5_1_9:139748116-139749417:+|nuORF	ENST00000485732.5_1_9:139748116-139749417:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1834716796875	2	412.740494	823.466435	2.6721	0.0011029	0.095968	3.961E-05	2.7681	0.0011425	412.74030226265006	101.85	0.21622	102.18	102.11	102.33	0.32511					6	4	2	0	0	0	0.4196	1	12414	12414		12.959	0	1	60334			57518	7170	38454	38470	65228	65228					0.047640686486602135
THRHVEKAIT	10	Unmodified	_THRHVEKAIT_					0	0	0			REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.3322143554688	2	596.333279	1190.652	-1.3013	-0.00077598	0.61641	0.00036758	-0.68485	-0.0004084	596.3335316328556	96.129	3.5172	96.331	95.353	98.87	0.20242					227	81	4	0	0	0	0.86698	1	9926	9926		28.081	0	1	1353000	+		57519	17010	38455	38471	65229	65229					0.06430426377460208
THRKLITILI	10	Unmodified	_THRKLITILI_					0	0	0			REV__ENSG00000197786|ENST00000357377|OR5B17	REV__ENSG00000197786|ENST00000357377|OR5B17	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3663940429688	2	604.39789	1206.78123	-0.16913	-0.00010222	-3.512	-0.0021226	-3.6811	-0.0022249	604.3942448758219	104.69	0.32537	104.69	104.5	104.83	0					12	7	2	0	0	0	0.37624	1	10771	10771		25.574	14.063	1	157320	+		57520	23270	38456	38472	65230	65230					0.18610808007588275
THRKVSPRAV	10	Unmodified	_THRKVSPRAV_					0	0	0			REV__ENST00000595091.6_2_19:53854892-53855471:+|nuORF	REV__ENST00000595091.6_2_19:53854892-53855471:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8427124023438	2	575.843813	1149.67307	0.61103	0.00035186	-2.2107	-0.001273	-1.5997	-0.00092115	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.86471	1	9250	9250		30.318	3.6248	1	6623700	+		57521	29242	38457	38473	65231	65231					0.10422436476983421
THRPGLPRLS	10	Unmodified	_THRPGLPRLS_					0	0	0		ENSG00000215115|ENST00000535490|CXorf49;ENSG00000215113|ENST00000542739|CXorf49B	ENSG00000215115|ENST00000535490|CXorf49	ENSG00000215115|ENST00000535490|CXorf49	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.32958984375	2	567.330539	1132.64652	-1.3957	-0.00079181	0.07479	4.2431E-05	-1.3209	-0.00074938	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86106	1	9454	9454		33.922	2.3918	1	17338000			57522	8647	38458	38474	65232	65232					0.0855074758567298
THRQKGTPLAL	11	Unmodified	_THRQKGTPLAL_					0	0	0		ENSG00000187550|ENST00000413299|SBK2	ENSG00000187550|ENST00000413299|SBK2	ENSG00000187550|ENST00000413299|SBK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3558349609375	2	611.356754	1220.69895	2.4219	0.0014807	-3.0766	-0.0018809	-0.65465	-0.00040023	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.68532	1	10229	10229		33.922	1.1092	1	12656000			57523	7860	38459	38475	65233	65233					0.0974328592863003
THRRLHAK	8	Unmodified	_THRRLHAK_					0	0	0			REV__ENSG00000163884|ENST00000296233|KLF15	REV__ENSG00000163884|ENST00000296233|KLF15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8052062988281	2	509.804491	1017.59443	0.54005	0.00027532	-1.5863	-0.00080869	-1.0462	-0.00053337	509.80356957278343	84.302	2.3533	84.749	83.349	85.703	0.44736					134	57	3	0	0	0	0.87479	1	9962	9962		30.504	3.7075	1	950450	+		57524	20991	38460	38476	65234	65234					0.08633628962559214
THRRLHAK	8	Unmodified	_THRRLHAK_					0	0	0			REV__ENSG00000163884|ENST00000296233|KLF15	REV__ENSG00000163884|ENST00000296233|KLF15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8039855957031	2	509.804491	1017.59443	-0.073626	-3.7535E-05	-1.4596	-0.00074412	-1.5332	-0.00078165	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.87922	1	10325	10325		31.955	3.7006	1	3087300	+		57525	20991	38460	38476	65235	65235					0.08633628962559214
THRRVTLLAQ	10	Unmodified	_THRRVTLLAQ_					0	0	0		nc|ENSG00000143951|O95876-2|WDPCP;ENSG00000143951|ENST00000272321|WDPCP;ENST00000409835.5_1_2:63587012-63815411:-|nuORF;ENST00000493315.1_1_2:63631156-63711794:-|nuORF;nc|ENSG00000143951|O95876-3|WDPCP	nc|ENSG00000143951|O95876-2|WDPCP	nc|ENSG00000143951|O95876-2|WDPCP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8557739257812	2	597.856921	1193.69929	-0.4308	-0.00025756	-0.72556	-0.00043378	-1.1564	-0.00069134	597.8562580242035	92.27	2.7665	92.315	90.514	93.28	0.045448					217	66	5	0	0	0	0.78666	1	9667	9667		40.058	0.80534	1	1998300			57526	4678	38461	38477	65236	65236					0.11018705648484683
THRSDTEMAYS	11	Unmodified	_THRSDTEMAYS_					0	0	0			REV__ENST00000595671.5_1_19:57286058-57293785:-|nuORF	REV__ENST00000595671.5_1_19:57286058-57293785:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.2554626464844	3	433.187431	1296.54046	4.8003	0.0020794	3.4654	0.0015012	8.2656	0.0035806	433.18882131542773	106.98	0.46359	107.13	106.93	107.39	0.14929					16	12	2	0	0	0	0.17396	1	13069	13069		45.908	25.878	1	1159800	+		57527	23975	38462	38478	65237	65237					-0.09594420832604555
THRSLLSN	8	Unmodified	_THRSLLSN_					0	0	0			REV__nc|ENSG00000213020|Q8N823-2|ZNF611	REV__nc|ENSG00000213020|Q8N823-2|ZNF611	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.25384521484375	2	464.253966	926.493378	-1.1814	-0.00054845	1.3519	0.00062764	0.17058	7.9191E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.88601	1	8064	8064		34.173	0.65696	1	946850	+		57528	23604	38463	38479	65238	65238					0.027191324691898444
THRSLLSN	8	Unmodified	_THRSLLSN_					0	0	0			REV__nc|ENSG00000213020|Q8N823-2|ZNF611	REV__nc|ENSG00000213020|Q8N823-2|ZNF611	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25341796875	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.90983	1	8038	8038		42.396	5.3677	1	1482000	+		57529	23604	38463	38479	65239	65239					0.027191324691898444
THRSSLLN	8	Unmodified	_THRSSLLN_					0	0	0		ENSG00000080298|ENST00000617270|RFX3;nc|ENSG00000080298|P48380-2|RFX3;nc|ENSG00000080298|P48380-3|RFX3	ENSG00000080298|ENST00000617270|RFX3	ENSG00000080298|ENST00000617270|RFX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2540588378906	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.87479	1	8690	8690		30.504	0	1	1673200			57530	1438	38464	38480	65240	65240					0.027191324691898444
THRTRKPKI	9	Unmodified	_THRTRKPKI_					0	0	0		ENST00000467569.5_1_20:19870056-19916128:+|nuORF	ENST00000467569.5_1_20:19870056-19916128:+|nuORF	ENST00000467569.5_1_20:19870056-19916128:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8536376953125	2	568.854181	1135.69381	-1.1637	-0.000662	-0.61846	-0.00035181	-1.7822	-0.0010138	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.51307	1	10939	10939		51.335	3.6781	1	50786000			57531	12158	38465	38481	65241	65241					0.1313902685665198
THRTTKVKKSP	11	Unmodified	_THRTTKVKKSP_					0	0	0		ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8823852539062	2	641.883136	1281.75172	-0.050098	-3.2157E-05	-0.96956	-0.00062234	-1.0197	-0.0006545	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.6493	1	10457	10457		38.754	4.832	1	3644700			57532	7094	38466	38482	65242	65242					0.12211243991418996
THRTTKVKKSP	11	Unmodified	_THRTTKVKKSP_					0	0	0		ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8821411132812	2	641.883136	1281.75172	1.6823	0.0010798	-2.7332	-0.0017544	-1.051	-0.00067461	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.69248	2	10495	10422;10495		32.751	6.0576	1	3772700			57533	7094	38466	38482	65243;65244	65244					0.12211243991418996
THRTTKVKKSP	11	Unmodified	_THRTTKVKKSP_					0	0	0		ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8823852539062	2	641.883136	1281.75172	1.5974	0.0010254	-2.7094	-0.0017391	-1.112	-0.00071377	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.66009	1	10078	10078		37.508	8.3586	1	4266200			57534	7094	38466	38482	65245	65245					0.12211243991418996
THRTTKVKKSP	11	Unmodified	_THRTTKVKKSP_					0	0	0		ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.88232421875	2	641.883136	1281.75172	0.91411	0.00058675	-1.9967	-0.0012817	-1.0826	-0.00069492	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.70737	1	10220	10220		30.318	1.1477	1	4136300			57535	7094	38466	38482	65246	65246					0.12211243991418996
THRTTKVKKSP	11	Unmodified	_THRTTKVKKSP_					0	0	0		ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8822631835938	2	641.883136	1281.75172	-1.1529	-0.00074004	0.033515	2.1513E-05	-1.1194	-0.00071853	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.67778	1	10119	10119		35.152	5.982	1	3521600			57536	7094	38466	38482	65247	65247					0.12211243991418996
THRTTKVKKSP	11	Unmodified	_THRTTKVKKSP_					0	0	0		ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	641.8827514648438	2	641.883136	1281.75172	1.4722	0.00094496	-2.5524	-0.0016383	-1.0802	-0.00069336	641.88132587144	97.282	4.1174	97.668	96.697	100.81	0.38548					300	101	5	0	0	0	0.69248	1	11840	11840		32.751	4.8683	1	4511200			57537	7094	38466	38482	65248	65248					0.12211243991418996
THRTTKVKKSP	11	Unmodified	_THRTTKVKKSP_					0	0	0		ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8822021484375	2	641.883136	1281.75172	2.6248	0.0016848	-3.6695	-0.0023554	-1.0447	-0.00067061	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.62914	1	11797	11797		41.08	3.2685	1	4455800			57538	7094	38466	38482	65249	65249					0.12211243991418996
THRVRSVVQL	10	Unmodified	_THRVRSVVQL_					0	0	0			REV__ENST00000546413.1_1_12:100558666-100558768:-|nuORF	REV__ENST00000546413.1_1_12:100558666-100558768:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8568115234375	2	597.856921	1193.69929	-0.35529	-0.00021242	-0.43374	-0.00025932	-0.78904	-0.00047173	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.82886	1	9039	9039		37.812	0	1	1224100	+		57539	28536	38467	38483	65250	65250					0.11018705648461946
THRVRSVVQL	10	Unmodified	_THRVRSVVQL_					0	0	0			REV__ENST00000546413.1_1_12:100558666-100558768:-|nuORF	REV__ENST00000546413.1_1_12:100558666-100558768:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8560791015625	2	597.856921	1193.69929	-0.56163	-0.00033577	-0.46706	-0.00027924	-1.0287	-0.00061501	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.82886	1	9954	9954		37.812	1.3648	1	6282800	+		57540	28536	38467	38483	65251	65251					0.11018705648461946
THRVRSVVQL	10	Unmodified	_THRVRSVVQL_					0	0	0			REV__ENST00000546413.1_1_12:100558666-100558768:-|nuORF	REV__ENST00000546413.1_1_12:100558666-100558768:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8558349609375	2	597.856921	1193.69929	-0.4308	-0.00025756	-0.72556	-0.00043378	-1.1564	-0.00069134	597.8562580242035	92.27	2.7665	92.315	90.514	93.28	0.045448					217	66	5	0	0	0	0.73395	1	9642	9642		42.864	6.4175	1	1998300	+		57541	28536	38467	38483	65252	65252					0.11018705648461946
THRVRSVVQL	10	Unmodified	_THRVRSVVQL_					0	0	0			REV__ENST00000546413.1_1_12:100558666-100558768:-|nuORF	REV__ENST00000546413.1_1_12:100558666-100558768:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8558959960938	2	597.856921	1193.69929	0.93581	0.00055948	-2.1237	-0.0012697	-1.1879	-0.00071018	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.63899	1	9365	9365		47.96	2.0076	1	2638300	+		57542	28536	38467	38483	65253	65253					0.11018705648461946
THSAGEFFT	9	Unmodified	_THSAGEFFT_					0	0	0		nc|ENSG00000151065|Q8IZD4-2|DCP1B;ENST00000543381.5_1_12:2055374-2100299:-|nuORF;ENSG00000151065|ENST00000280665|DCP1B	nc|ENSG00000151065|Q8IZD4-2|DCP1B	nc|ENSG00000151065|Q8IZD4-2|DCP1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.7710876464844	2	498.724707	995.43486	4.4961	0.0022423	-1.1213	-0.00055921	3.3749	0.0016831	498.72367736790636	107.15	0.15056	107.3	107.21	107.36	0.14929					5	3	2	0	0	0	0.20789	1	13103	13103		29.15	3.6994	1	40143			57543	5091	38468	38484	65254	65254					-0.06303968895952039
THSERTIAS	9	Unmodified	_THSERTIAS_					0	0	0			REV__nc|ENSG00000169118|Q9HCP0-2|CSNK1G1	REV__nc|ENSG00000169118|Q9HCP0-2|CSNK1G1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2904052734375	2	501.254163	1000.49377	-1.5564	-0.00078013	-1.0087	-0.00050561	-2.565	-0.0012857	501.2534566736109	86.365	0.21329	86.53	86.438	86.651	0.16473					6	4	2	0	0	0	0.20789	1	8445	8445		28.081	0	1	32884	+		57544	21550	38469	38485	65255	65255					-0.006454926016090212
THSHKLFKKL	10	Unmodified	_THSHKLFKKL_					0	0	0		nc|ENSG00000021461|Q9HB55-6|CYP3A43;nc|ENSG00000021461|Q9HB55-3|CYP3A43;ENSG00000021461|ENST00000354829|CYP3A43;nc|ENSG00000021461|Q9HB55-2|CYP3A43;nc|ENSG00000021461|Q9HB55-4|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8692016601562	2	619.87204	1237.72953	-0.2143	-0.00013284	-4.1033	-0.0025435	-4.3176	-0.0026764	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.86272	1	9342	9342		24.519	2.8334	1	1169100			57545	14741	38470	38486	65256	65256					0.1201706431365892
THSHKLFKKL	10	Unmodified	_THSHKLFKKL_					0	0	0		nc|ENSG00000021461|Q9HB55-6|CYP3A43;nc|ENSG00000021461|Q9HB55-3|CYP3A43;ENSG00000021461|ENST00000354829|CYP3A43;nc|ENSG00000021461|Q9HB55-2|CYP3A43;nc|ENSG00000021461|Q9HB55-4|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8695068359375	2	619.87204	1237.72953	-0.18235	-0.00011304	-3.8434	-0.0023824	-4.0258	-0.0024955	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.82886	3	9607	9497;9596;9607		37.812	7.4938	1	2627900			57546	14741	38470	38486	65257;65258;65259	65259					0.1201706431365892
THSHKLFKKL	10	Unmodified	_THSHKLFKKL_					0	0	0		nc|ENSG00000021461|Q9HB55-6|CYP3A43;nc|ENSG00000021461|Q9HB55-3|CYP3A43;ENSG00000021461|ENST00000354829|CYP3A43;nc|ENSG00000021461|Q9HB55-2|CYP3A43;nc|ENSG00000021461|Q9HB55-4|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8682250976562	2	619.87204	1237.72953	-0.30632	-0.00018988	-4.2007	-0.0026039	-4.507	-0.0027938	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.70553	1	9838	9838		44.377	6.5657	1	2103100			57547	14741	38470	38486	65260	65260					0.1201706431365892
THSHKLFKKL	10	Unmodified	_THSHKLFKKL_					0	0	0		nc|ENSG00000021461|Q9HB55-6|CYP3A43;nc|ENSG00000021461|Q9HB55-3|CYP3A43;ENSG00000021461|ENST00000354829|CYP3A43;nc|ENSG00000021461|Q9HB55-2|CYP3A43;nc|ENSG00000021461|Q9HB55-4|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8687744140625	2	619.87204	1237.72953	-1.2246	-0.00075908	-3.2008	-0.0019841	-4.4254	-0.0027432	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.70553	1	9451	9451		44.377	7.9304	1	3118800			57548	14741	38470	38486	65261	65261					0.1201706431365892
THSHKLFKKL	10	Unmodified	_THSHKLFKKL_					0	0	0		nc|ENSG00000021461|Q9HB55-6|CYP3A43;nc|ENSG00000021461|Q9HB55-3|CYP3A43;ENSG00000021461|ENST00000354829|CYP3A43;nc|ENSG00000021461|Q9HB55-2|CYP3A43;nc|ENSG00000021461|Q9HB55-4|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	nc|ENSG00000021461|Q9HB55-6|CYP3A43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8693237304688	2	619.87204	1237.72953	-1.2246	-0.00075909	-2.9733	-0.001843	-4.1979	-0.0026021	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.67571	6	9825	9767;9789;9825;9896;9908;10006		45.972	6.115	1	6224400			57549	14741	38470	38486	65262;65263;65264;65265;65266;65267	65264					0.1201706431365892
THSIAHLV	8	Unmodified	_THSIAHLV_					0	0	0		ENSG00000106459|ENST00000393232|NRF1;nc|ENSG00000106459|Q16656-4|NRF1;nc|ENSG00000106459|Q16656-3|NRF1	ENSG00000106459|ENST00000393232|NRF1	ENSG00000106459|ENST00000393232|NRF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.2481384277344	2	439.248152	876.481751	-0.31709	-0.00013928	3.8095	0.0016733	3.4924	0.001534	439.2502491650942	31.98	0.80886	31.929	31.472	32.281	-0.051033					43	17	3	0	0	0	0.94132	1	1826	1826		54.765	12.29	1	119020			57550	2297	38471	38487	65268	65268					0.038569354458559246
THSKVTFEIH	10	Unmodified	_THSKVTFEIH_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.21124267578125	3	400.212017	1197.61422	2.0047	0.0008023	-3.8814	-0.0015534	-1.8767	-0.00075108	400.2103540579903	22.755	0.8161	22.336	21.833	22.649	-0.41879					37	18	3	0	0	0	0.85834	1	954	954		22.58	3.317	1	129820			57551	8292	38472	38488	65269	65269					0.023319153920056124
THSLLRRIAQ	10	Unmodified	_THSLLRRIAQ_					0	0	0		ENSG00000105278|ENST00000262961|ZFR2	ENSG00000105278|ENST00000262961|ZFR2	ENSG00000105278|ENST00000262961|ZFR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8567504882812	2	597.856921	1193.69929	-1.2962	-0.00077492	0.5934	0.00035477	-0.70276	-0.00042015	598.3589924641743	94.317	5.5544	94.515	93.356	98.911	0.19827					368	130	4	0	0	0	0.86218	1	9760	9760		32.812	1.2826	1	9481100			57552	2198	38473	38489	65270	65270					0.11018705648461946
THSLTNSHAH	10	Unmodified	_THSLTNSHAH_					0	0	0		ENSG00000181722|ENST00000675478|ZBTB20	ENSG00000181722|ENST00000675478|ZBTB20	ENSG00000181722|ENST00000675478|ZBTB20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.7625732421875	2	552.762686	1103.51082	0.3813	0.00021077	-0.54641	-0.00030204	-0.16511	-9.1266E-05	552.7623981709792	17.805	0.38344	17.88	17.742	18.125	0.075441					17	11	2	0	0	0	0.74274	1	228	228		42.396	1.618	1	60283			57553	7401	38474	38490	65271	65271					-0.03679571995803599
THSPIVPAS	9	Unmodified	_THSPIVPAS_					0	0	0		ENST00000530149.1_1_11:212820-213114:+|nuORF	ENST00000530149.1_1_11:212820-213114:+|nuORF	ENST00000530149.1_1_11:212820-213114:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.744873046875	2	454.745442	907.476331	-0.13391	-6.0896E-05	-0.83302	-0.00037881	-0.96693	-0.00043971	454.7449043410658	103.95	1.6099	103.94	103.26	104.87	-0.0035706					76	38	3	0	0	0	0.74721	1	11173	11173		37.159	6.6555	1	761390			57554	13340	38475	38491	65272	65272					0.018892118633857535
THSPLAVMSRW	11	Unmodified	_THSPLAVMSRW_					0	0	0		ENST00000278505.4_1_11:94861649-94861739:+|nuORF	ENST00000278505.4_1_11:94861649-94861739:+|nuORF	ENST00000278505.4_1_11:94861649-94861739:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3607177734375	2	642.829514	1283.64448	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.01	1	118.94	118.44	119.44	-0.07531								0	0	0	0.56276	1	12767	12767		44.377	10.205	1				57555	9608	38476	38492	65273	65273					0.013999507855487536
THSSLLLAVLL	11	Unmodified	_THSSLLLAVLL_					0	0	0		nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;ENSG00000134668|ENST00000360482|SPOCD1;nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	nc|ENSG00000134668|Q6ZMY3-2|SPOCD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.8589477539062	2	583.860806	1165.70706	-0.80585	-0.00047051	-2.4571	-0.0014346	-3.263	-0.0019051	583.8591949944405	98.804	2.4153	98.854	98.351	100.77	0.049828					137	55	4	0	0	0	0.72918	1	10524	10524		26.693	0	1	1986800			57556	3950	38477	38493	65274	65274					0.13083420125394696
THSVRIRISGL	11	Unmodified	_THSVRIRISGL_					0	0	0			REV__nc|ENSG00000265944|J3KSC0|LINC01387	REV__nc|ENSG00000265944|J3KSC0|LINC01387	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8690185546875	2	619.870028	1237.7255	-0.30632	-0.00018988	-0.95589	-0.00059253	-1.2622	-0.00078241	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.61369	1	9779	9779		42.864	3.6114	1	2103100	+		57557	30255	38478	38494	65275	65275					0.11614974819940471
THSVRIRISGL	11	Unmodified	_THSVRIRISGL_					0	0	0			REV__nc|ENSG00000265944|J3KSC0|LINC01387	REV__nc|ENSG00000265944|J3KSC0|LINC01387	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8699340820312	2	619.870028	1237.7255	-0.30615	-0.00018977	-0.58957	-0.00036546	-0.89572	-0.00055523	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.72918	1	10179	10179		26.693	2.1737	1	4796900	+		57558	30255	38478	38494	65276	65276					0.11614974819940471
THSVRIRISGL	11	Unmodified	_THSVRIRISGL_					0	0	0			REV__nc|ENSG00000265944|J3KSC0|LINC01387	REV__nc|ENSG00000265944|J3KSC0|LINC01387	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	620.3695068359375	2	619.870028	1237.7255	2.0624	0.0012784	-3.3055	-0.002049	-1.2431	-0.00077056	619.8678492982955	94.196	2.767	94.137	92.294	95.061	-0.059212					208	65	4	0	0	0	0.61369	1	10057	10057		42.864	3.6114	1	2061200	+		57559	30255	38478	38494	65277	65277					0.11614974819940471
THSVRIRISGL	11	Unmodified	_THSVRIRISGL_					0	0	0			REV__nc|ENSG00000265944|J3KSC0|LINC01387	REV__nc|ENSG00000265944|J3KSC0|LINC01387	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8692016601562	2	619.870028	1237.7255	0.62246	0.00038584	-1.8404	-0.0011408	-1.2179	-0.00075497	619.8687823008486	94.059	2.9324	94.104	92.154	95.087	0.045448					223	69	4	0	0	0	0.7144	1	9848	9848		29.17	3.596	1	2371600	+		57560	30255	38478	38494	65278	65278					0.11614974819940471
THSVRIRISGL	11	Unmodified	_THSVRIRISGL_					0	0	0			REV__nc|ENSG00000265944|J3KSC0|LINC01387	REV__nc|ENSG00000265944|J3KSC0|LINC01387	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.869384765625	2	619.870028	1237.7255	1.2648	0.00078404	-2.3923	-0.0014829	-1.1274	-0.00069886	619.86841143733	93.879	2.9041	94.108	92.241	95.145	0.22863					217	69	4	0	0	0	0.66929	1	9528	9528		36.447	6.129	1	2572300	+		57561	30255	38478	38494	65279	65279					0.11614974819940471
THSVRIRISGL	11	Unmodified	_THSVRIRISGL_					0	0	0			REV__nc|ENSG00000265944|J3KSC0|LINC01387	REV__nc|ENSG00000265944|J3KSC0|LINC01387	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8696899414062	2	619.870028	1237.7255	0.87762	0.00054401	-1.8204	-0.0011284	-0.94278	-0.0005844	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.66929	2	9943	9872;9943		36.447	5.9431	1	6574700	+		57562	30255	38478	38494	65280;65281	65281					0.11614974819940471
THSVRIRISGL	11	Unmodified	_THSVRIRISGL_					0	0	0			REV__nc|ENSG00000265944|J3KSC0|LINC01387	REV__nc|ENSG00000265944|J3KSC0|LINC01387	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8690185546875	2	619.870028	1237.7255	-1.2246	-0.00075908	0.04402	2.7286E-05	-1.1806	-0.0007318	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.72106	1	9439	9439		28.081	2.6313	1	3118800	+		57563	30255	38478	38494	65282	65282					0.11614974819940471
THSVRIRISGL	11	Unmodified	_THSVRIRISGL_					0	0	0			REV__nc|ENSG00000265944|J3KSC0|LINC01387	REV__nc|ENSG00000265944|J3KSC0|LINC01387	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8693237304688	2	619.870028	1237.7255	-1.2246	-0.00075909	0.27155	0.00016833	-0.95304	-0.00059076	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.7434	1	9861	9861		23.523	0	1	6224400	+		57564	30255	38478	38494	65283	65283					0.11614974819940471
THSVRIRISGL	11	Unmodified	_THSVRIRISGL_					0	0	0			REV__nc|ENSG00000265944|J3KSC0|LINC01387	REV__nc|ENSG00000265944|J3KSC0|LINC01387	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8695678710938	2	619.870028	1237.7255	1.7162	0.0010638	-2.4227	-0.0015017	-0.70652	-0.00043795	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.67778	1	11423	11423		35.152	3.6222	1	4719500	+		57565	30255	38478	38494	65284	65284					0.11614974819940471
THTKVHKRL	9	Unmodified	_THTKVHKRL_					0	0	0			REV__ENSG00000188033|ENST00000311437|ZNF490	REV__ENSG00000188033|ENST00000311437|ZNF490	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3403930664062	2	560.340907	1118.66726	1.6683	0.00093481	-2.8998	-0.0016249	-1.2316	-0.00069009	560.3391894187363	89.567	3.3537	89.494	86.948	90.302	-0.07238					131	78	3	0	0	0	0.71772	1	9378	9378		39.253	7.298	1	1075700	+		57566	22972	38479	38495	65285	65285					0.11267337965318802
THTLLPPLKG	10	Unmodified	_THTLLPPLKG_					0	0	0		ENST00000480340.1_1_1:153903067-153903409:-|nuORF	ENST00000480340.1_1_1:153903067-153903409:-|nuORF	ENST00000480340.1_1_1:153903067-153903409:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.8295288085938	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.31	1	115.34	114.84	115.84	0.026466								0	0	0	0.45132	1	12646	12646		34.173	0	1				57567	12429	38480	38496	65286	65286					0.10418595265377917
THTPLRRVTP	10	Unmodified	_THTPLRRVTP_					0	0	0			REV__nc|ENSG00000146147|Q5VWP3-1|MLIP	REV__nc|ENSG00000146147|Q5VWP3-1|MLIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3427734375	2	589.343646	1176.67274	0.80964	0.00047716	-2.3286	-0.0013723	-1.5189	-0.00089516	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.8651	1	9347	9347		25.574	2.0514	1	6634500	+		57568	19991	38481	38497	65287	65287					0.09147016757151505
THTPLRRVTP	10	Unmodified	_THTPLRRVTP_					0	0	0			REV__nc|ENSG00000146147|Q5VWP3-1|MLIP	REV__nc|ENSG00000146147|Q5VWP3-1|MLIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3433227539062	2	589.343646	1176.67274	0.82336	0.00048524	-2.0045	-0.0011814	-1.1812	-0.00069612	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.86106	1	11407	11407		33.922	3.418	1	9460500	+		57569	19991	38481	38497	65288	65288					0.09147016757151505
THTRGHVRL	9	Unmodified	_THTRGHVRL_					0	0	0			REV__ENSG00000196757|ENST00000254321|ZNF700	REV__ENSG00000196757|ENST00000254321|ZNF700	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8065795898438	2	538.807231	1075.59991	2.2674	0.0012217	-3.269	-0.0017614	-1.0016	-0.00053969	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.77244	1	9632	9632		32.812	3.6629	1	835060	+		57570	23169	38482	38498	65289	65289					0.06513307754380548
THTRQHILK	9	Unmodified	_THTRQHILK_					0	0	0			REV__ENSG00000198131|ENST00000687789|ZNF544	REV__ENSG00000198131|ENST00000687789|ZNF544	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3291015625	2	567.330539	1132.64652	0.4851	0.00027521	-1.8618	-0.0010563	-1.3767	-0.00078107	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.78983	1	9786	9786		27.882	2.3082	1	18558000	+		57571	23302	38483	38499	65290	65290					0.08550747585650242
THTRQHRILES	11	Unmodified	_THTRQHRILES_					0	0	0			REV__ENSG00000267041|ENST00000591344|ZNF850	REV__ENSG00000267041|ENST00000591344|ZNF850	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.260498046875	3	459.916375	1376.72729	0.47383	0.00021792	-1.0143	-0.00046648	-0.54045	-0.00024856	459.915943795789	29.207	1.0668	29.034	28.468	29.535	-0.17336					35	24	3	0	0	0	0.18066	1	1779	1779		9.6461	0	1	156450	+		57572	23966	38484	38500	65291	65291					0.05399983837924083
THTRQHRILES	11	Unmodified	_THTRQHRILES_					0	0	0			REV__ENSG00000267041|ENST00000591344|ZNF850	REV__ENSG00000267041|ENST00000591344|ZNF850	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	459.916375	1376.72729	-1.3441	-0.00061816	0.79605	0.00036612	-0.54801	-0.00025204	459.91677527819735	29.072	0.56355	29.043	28.693	29.257	-0.029207	0.00469	0.0010812	NaN	1.1482	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141270	+		57573	23966	38484	38500							0.05399983837924083
THTRVFVQQ	9	Unmodified	_THTRVFVQQ_					0	0	0		ENST00000441047.1_1_17:51834352-51834658:-|nuORF	ENST00000441047.1_1_17:51834352-51834658:-|nuORF	ENST00000441047.1_1_17:51834352-51834658:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.3023071289062	2	558.301447	1114.58834	1.0403	0.00058079	-0.63516	-0.00035461	0.40513	0.00022618	558.3007929714444	27.952	0.71391	27.698	27.454	28.168	-0.25465					33	16	3	0	0	0	0.7932	1	1676	1676		26.693	1.1189	1	183130			57574	11779	38485	38501	65292	65292					0.03563065940375054
THVAAARN	8	Unmodified	_THVAAARN_					0	0	0			REV__ENSG00000116903|ENST00000366645|EXOC8	REV__ENSG00000116903|ENST00000366645|EXOC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2276916503906	2	420.227751	838.440949	0.089833	3.775E-05	0.27766	0.00011668	0.3675	0.00015443	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.87479	1	7793	7793		30.504	2.2494	1	888480	+		57575	18232	38486	38502	65293	65293					0.015265941262214255
THVAAARN	8	Unmodified	_THVAAARN_					0	0	0			REV__ENSG00000116903|ENST00000366645|EXOC8	REV__ENSG00000116903|ENST00000366645|EXOC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2272033691406	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.87479	1	7315	7315		30.504	2.2494	1	831720	+		57576	18232	38486	38502	65294	65294					0.015265941262214255
THVAAARN	8	Unmodified	_THVAAARN_					0	0	0			REV__ENSG00000116903|ENST00000366645|EXOC8	REV__ENSG00000116903|ENST00000366645|EXOC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2272644042969	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.89962	1	7325	7325		38.806	1.647	1	678130	+		57577	18232	38486	38502	65295	65295					0.015265941262214255
THVAAARN	8	Unmodified	_THVAAARN_					0	0	0			REV__ENSG00000116903|ENST00000366645|EXOC8	REV__ENSG00000116903|ENST00000366645|EXOC8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.22723388671875	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.87479	1	7610	7610		30.504	2.6214	1	634680	+		57578	18232	38486	38502	65296	65296					0.015265941262214255
THVAAARN	8	Unmodified	_THVAAARN_					0	0	0			REV__ENSG00000116903|ENST00000366645|EXOC8	REV__ENSG00000116903|ENST00000366645|EXOC8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.2273864746094	2	420.227751	838.440949	0.042435	1.7832E-05	0.092754	3.8978E-05	0.13519	5.681E-05	420.2277069932212	78.969	5.8282	79.518	76.332	82.16	0.54945					273	145	3	0	0	0	0.89962	1	8930	8930		38.806	6.8513	1	581780	+		57579	18232	38486	38502	65297	65297					0.015265941262214255
THVARASK	8	Unmodified	_THVARASK_					0	0	0			REV__ENST00000606771.1_1_6:17706507-17706798:+|nuORF	REV__ENST00000606771.1_1_6:17706507-17706798:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2529602050781	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.84341	1	8037	8037		24.203	0	1	3322700	+		57580	29374	38487	38503	65298	65298					0.04839453677379879
THVGEAKFV	9	Unmodified	_THVGEAKFV_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.30078125	2	494.266542	986.51853	1.0066	0.00049752	1.33	0.0006574	2.3366	0.0011549	494.26756197446895	97.153	0.23845	97.558	97.379	97.617	0.40498					7	5	2	0	0	0	0.20789	1	11656	11656		35.618	0	1	84760	+		57581	20385;29943	38488	38504	65299	65299					0.024731872717552505
THVGGVRN	8	Unmodified	_THVGGVRN_					0	0	0			REV__ENSG00000169154|ENST00000307599|GOT1L1	REV__ENSG00000169154|ENST00000307599|GOT1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2274475097656	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.89962	1	7514	7514		38.806	6.8513	1	678130	+		57582	21555	38489	38505	65300	65300					0.015265941262327942
THVGPLGQRR	10	Unmodified	_THVGPLGQRR_					0	0	0			REV__ENST00000566635.5_1_15:28356911-28362639:-|nuORF	REV__ENST00000566635.5_1_15:28356911-28362639:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8197631835938	2	560.820338	1119.62612	-1.1548	-0.00064764	0.17668	9.9087E-05	-0.97813	-0.00054855	560.8203192234314	92.561	2.9962	92.631	91.312	94.308	0.06987					218	70	4	0	0	0	0.74274	1	9511	9511		42.396	1.618	1	775670	+		57583	28872	38490	38506	65301	65301					0.07109576925859074
THVKQHRLFN	10	Unmodified	_THVKQHRLFN_					0	0	0			REV__nc|ENSG00000131849|P52740-2|ZNF132	REV__nc|ENSG00000131849|P52740-2|ZNF132	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3587036132812	2	640.354545	1278.69454	2.419	0.001549	4.2863	0.0027448	6.7053	0.0042938	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.70553	1	10786	10786		44.377	7.9304	1	625580	+		57584	18972	38491	38507	65302	65302					0.0663382150569305
THVKRHQAL	9	Unmodified	_THVKRHQAL_					0	0	0			REV__ENST00000532486.5_1_8:144774355-144776697:+|nuORF	REV__ENST00000532486.5_1_8:144774355-144776697:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3170166015625	2	545.317432	1088.62031	-0.68757	-0.00037494	-0.58844	-0.00032088	-1.276	-0.00069583	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.76255	1	8498	8498		35.618	4.0885	1	3608000	+		57585	28326	38492	38508	65303	65303					0.07954478414194455
THVLDSFLK	9	Unmodified	_THVLDSFLK_					0	0	0			REV__nc|ENSG00000174799|Q66GS9-2|CEP135	REV__nc|ENSG00000174799|Q66GS9-2|CEP135	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2936401367188	2	530.295299	1058.57605	-0.73575	-0.00039016	-2.8196	-0.0014952	-3.5553	-0.0018854	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.76764	1	8835	8835		34.173	0.65696	1	1390700	+		57586	22015	38493	38509	65304	65304					0.049100294773325004
THVLDSFLK	9	Unmodified	_THVLDSFLK_					0	0	0			REV__nc|ENSG00000174799|Q66GS9-2|CEP135	REV__nc|ENSG00000174799|Q66GS9-2|CEP135	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2931518554688	2	530.295299	1058.57605	0.74166	0.0003933	-4.3452	-0.0023043	-3.6036	-0.001911	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.76764	1	9028	9028		34.173	1.3601	1	2081200	+		57587	22015	38493	38509	65305	65305					0.049100294773325004
THVLRYTV	8	Unmodified	_THVLRYTV_					0	0	0		nc|ENSG00000164270|Q13639-2|HTR4	nc|ENSG00000164270|Q13639-2|HTR4	nc|ENSG00000164270|Q13639-2|HTR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.78021240234375	2	494.782359	987.550165	-0.85772	-0.00042438	-3.1278	-0.0015476	-3.9855	-0.001972	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.87479	1	8840	8840		30.504	1.3541	1	737700			57588	15055	38494	38510	65306	65306					0.0558918002569726
THVLRYTV	8	Unmodified	_THVLRYTV_					0	0	0		nc|ENSG00000164270|Q13639-2|HTR4	nc|ENSG00000164270|Q13639-2|HTR4	nc|ENSG00000164270|Q13639-2|HTR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7799377441406	2	494.782359	987.550165	-0.60525	-0.00029947	-3.7112	-0.0018362	-4.3164	-0.0021357	494.7803656183054	83.829	2.2213	83.994	82.644	84.865	0.1651					103	51	3	0	0	0	0.87064	1	8073	8073		29.15	3.5755	1	285340			57589	15055	38494	38510	65307	65307					0.0558918002569726
THVMQLLLLLG	11	Unmodified	_THVMQLLLLLG_					0	0	0			REV__ENST00000581185.5_1_17:25628846-25628948:+|nuORF	REV__ENST00000581185.5_1_17:25628846-25628948:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8732299804688	2	619.370484	1236.72641	-0.10662	-6.6034E-05	2.5001	0.0015485	2.3935	0.0014824	619.3719649656875	101.89	1.4654	101.89	101.45	102.91	0					98	36	4	0	0	0	0.69995	1	10360	10360		31.53	3.6476	1	1989800	+		57590	29046	38495	38511	65308	65308					0.11752053144664387
THVMQLLLLLG	11	Unmodified	_THVMQLLLLLG_					0	0	0			REV__ENST00000581185.5_1_17:25628846-25628948:+|nuORF	REV__ENST00000581185.5_1_17:25628846-25628948:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.3717651367188	2	619.370484	1236.72641	2.9405	0.0018212	0.1384	8.572E-05	3.0789	0.001907	619.3710459342678	101.7	2.0362	101.65	101.12	103.16	-0.049828					124	48	5	0	0	0	0.72228	1	11045	11045		27.882	5.9224	1	3045300	+		57591	29046	38495	38511	65309	65309					0.11752053144664387
THVPHVAFLL	10	Unmodified	_THVPHVAFLL_					0	0	0			REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3298950195312	2	567.326934	1132.63931	1.5887	0.00090129	3.6924	0.0020948	5.2811	0.0029961	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.86452	1	9521	9521		30.504	2.6214	1	5459400	+		57592	18631	38496	38512	65310	65310					0.07830014985233902
THVPHVAFLL	10	Unmodified	_THVPHVAFLL_					0	0	0			REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3296508789062	2	567.326934	1132.63931	1.492	0.00084643	3.8266	0.002171	5.3186	0.0030174	567.3289538117637	90.426	2.7542	90.472	88.508	91.262	0.04644					279	65	6	0	0	0	0.86589	1	9313	9313		29.15	1.2673	1	5346500	+		57593	18631	38496	38512	65311	65311					0.07830014985233902
THVPHVAFLL	10	Unmodified	_THVPHVAFLL_					0	0	0			REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.330078125	2	567.326934	1132.63931	1.497	0.00084932	3.499	0.0019851	4.9961	0.0028344	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.86589	1	9623	9623		29.15	4.9468	1	15259000	+		57594	18631	38496	38512	65312	65312					0.07830014985233902
THVPHVAFLL	10	Unmodified	_THVPHVAFLL_					0	0	0			REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3301391601562	2	567.326934	1132.63931	1.3743	0.0007797	3.9991	0.0022688	5.3735	0.0030485	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.86452	1	10979	10979		30.504	5.9844	1	6182600	+		57595	18631	38496	38512	65313	65313					0.07830014985233902
THVRKHGIL	9	Unmodified	_THVRKHGIL_					0	0	0			REV__ENST00000483450.1_1_6:28962780-28967471:-|nuORF	REV__ENST00000483450.1_1_6:28962780-28967471:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8203125	2	530.82235	1059.63015	-0.07706	-4.0905E-05	-1.1778	-0.00062518	-1.2548	-0.00066609	530.8209412873214	80.1	1.1831	80.237	79.822	81.005	0.13701					104	34	4	0	0	0	0.58668	1	7682	7682		47.657	9.8458	1	1032800	+		57596	23280	38497	38513	65314	65314					0.10271666419589565
THVRKHGIL	9	Unmodified	_THVRKHGIL_					0	0	0			REV__ENST00000483450.1_1_6:28962780-28967471:-|nuORF	REV__ENST00000483450.1_1_6:28962780-28967471:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.82080078125	2	530.82235	1059.63015	-1.3153	-0.00069821	-1.8013	-0.00095618	-3.1166	-0.0016544	530.821502391275	82.322	1.7995	82.448	81.931	83.731	0.12601					101	41	4	0	0	0	0.78536	1	7866	7866		29.15	1.0681	1	1875200	+		57597	23280	38497	38513	65315	65315					0.10271666419589565
THVRKHRML	9	Unmodified	_THVRKHRML_					0	0	0			REV__nc|ENSG00000188785|Q8NEK5|ZNF548	REV__nc|ENSG00000188785|Q8NEK5|ZNF548	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3427734375	2	589.340384	1176.66621	0.80964	0.00047716	3.2074	0.0018903	4.0171	0.0023674	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.64922	1	9335	9335		44.117	8.4985	1	6634500	+		57598	23030	38498	38514	65316	65316					0.08494800324774587
THVRKHRML	9	Unmodified	_THVRKHRML_					0	0	0			REV__nc|ENSG00000188785|Q8NEK5|ZNF548	REV__nc|ENSG00000188785|Q8NEK5|ZNF548	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.34326171875	2	589.340384	1176.66621	0.83312	0.00049099	3.4212	0.0020162	4.2543	0.0025072	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.76255	1	9751	9751		35.618	2.8059	1	20363000	+		57599	23030	38498	38514	65317	65317					0.08494800324774587
THVRKHRML	9	Unmodified	_THVRKHRML_					0	0	0			REV__nc|ENSG00000188785|Q8NEK5|ZNF548	REV__nc|ENSG00000188785|Q8NEK5|ZNF548	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3426513671875	2	589.340384	1176.66621	0.15554	9.1664E-05	4.2744	0.0025191	4.43	0.0026108	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.78536	1	11358	11358		29.15	1.2673	1	10540000	+		57600	23030	38498	38514	65318	65318					0.08494800324774587
THVRQHAS	8	Unmodified	_THVRQHAS_					0	0	0			REV__nc|ENSG00000198416|Q4V348|ZNF658B	REV__nc|ENSG00000198416|Q4V348|ZNF658B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2447814941406	2	468.243932	934.473312	2.7938	0.0013082	-1.0504	-0.00049183	1.7435	0.00081636	468.2433163822993	105.83	2.1976	105.79	104.81	107.01	-0.03714					128	51	4	0	0	0	0.884	3	11693	11669;11693;11717		38.806	5.2906	1	2085200	+		57601	24000	38499	38515	65319;65320;65321	65320					0.0034538152923460075
THVRQHAS	8	Unmodified	_THVRQHAS_					0	0	0			REV__nc|ENSG00000198416|Q4V348|ZNF658B	REV__nc|ENSG00000198416|Q4V348|ZNF658B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.244873046875	2	468.243932	934.473312	0.22264	0.00010425	1.6235	0.00076017	1.8461	0.00086442	468.24455399922584	105.74	1.8615	105.78	105.17	107.03	0.038322					109	43	4	0	0	0	0.89962	1	11546	11546		38.806	1.647	1	1899000	+		57602	24000	38499	38515	65322	65322					0.0034538152923460075
THVRQHAS	8	Unmodified	_THVRQHAS_					0	0	0			REV__nc|ENSG00000198416|Q4V348|ZNF658B	REV__nc|ENSG00000198416|Q4V348|ZNF658B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.2445983886719	2	468.243932	934.473312	3.3472	0.0015673	-1.5917	-0.0007453	1.7555	0.00082202	468.24305217377116	104.91	1.7279	105.14	104.51	106.24	0.22681					99	43	3	0	0	0	0.89043	1	12809	12809		35.618	0	1	787100	+		57603	24000	38499	38515	65323	65323					0.0034538152923460075
THVRQHEKL	9	Unmodified	_THVRQHEKL_					0	0	0			REV__ENSG00000152443|ENST00000317178|ZNF776	REV__ENSG00000152443|ENST00000317178|ZNF776	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3195190429688	2	574.320171	1146.62579	-1.0331	-0.00059332	-0.2741	-0.00015742	-1.3072	-0.00075074	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.78528	1	9828	9828		29.17	0.020503	1	1380900	+		57604	20297	38500	38516	65324	65324					0.0583415720600442
THVRQHKAL	9	Unmodified	_THVRQHKAL_					0	0	0			REV__ENSG00000180257|ENST00000444460|ZNF816	REV__ENSG00000180257|ENST00000444460|ZNF816	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3165283203125	2	545.317432	1088.62031	1.1684	0.00063715	-2.5262	-0.0013776	-1.3578	-0.00074041	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.76255	1	9162	9162		35.618	0	1	4705800	+		57605	22384	38501	38517	65325	65325					0.07954478414194455
THVRQHKAL	9	Unmodified	_THVRQHKAL_					0	0	0			REV__ENSG00000180257|ENST00000444460|ZNF816	REV__ENSG00000180257|ENST00000444460|ZNF816	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3167114257812	2	545.317432	1088.62031	-1.4674	-0.00080021	-0.051066	-2.7847E-05	-1.5185	-0.00082805	545.3172916402864	93.375	2.3581	93.567	93.147	95.505	0.19239					96	56	3	0	0	0	0.76255	1	9421	9421		35.618	0	1	1075700	+		57606	22384	38501	38517	65326	65326					0.07954478414194455
THVRQHTILS	10	Unmodified	_THVRQHTILS_					0	0	0			REV__nc|ENSG00000152454|Q9Y2P7-2|ZNF256	REV__nc|ENSG00000152454|Q9Y2P7-2|ZNF256	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.33251953125	2	596.333279	1190.652	0.92114	0.00054931	-1.5725	-0.00093773	-0.65136	-0.00038843	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.70553	1	9870	9870		44.377	1.5129	1	1402200	+		57607	20298	38502	38518	65327	65327					0.06430426377482945
THVRQHVNL	9	Unmodified	_THVRQHVNL_					0	0	0			REV__ENSG00000062370|ENST00000354340|ZNF112	REV__ENSG00000062370|ENST00000354340|ZNF112	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.306396484375	2	552.307064	1102.59957	-0.59209	-0.00032702	-0.41687	-0.00023024	-1.009	-0.00055726	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.76764	1	9150	9150		34.173	5.023	1	1102700	+		57608	16461	38503	38519	65328	65328					0.05237888034525895
THVTNVEKHI	10	Unmodified	_THVTNVEKHI_					0	0	0		ENST00000478296.5_1_3:75787041-75787971:-|nuORF	ENST00000478296.5_1_3:75787041-75787971:-|nuORF	ENST00000478296.5_1_3:75787041-75787971:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3428344726562	2	589.319837	1176.62512	-0.62728	-0.00036967	3.801	0.00224	3.1737	0.0018703	589.3207613311316	93.845	0.4212	93.891	93.751	94.172	0.045448					12	9	2	0	0	0	0.37624	1	9875	9875		29.17	3.596	1	116920			57609	12385	38504	38520	65329	65329					0.04387317766304477
THVTTLPSTAQ	11	Unmodified	_THVTTLPSTAQ_					0	0	0			REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	578.3034057617188	2	578.303852	1154.59315	-0.34205	-0.00019781	3.1033	0.0017947	2.7613	0.0015968	578.3054794983877	52.853	0.94507	52.87	52.533	53.478	0.017487					51	25	3	0	0	0	0.7144	1	4589	4589		29.17	3.596	1	259410	+		57610	18513	38505	38521	65330	65330					0.022039052924810676
THWGNLPVNL	10	Unmodified	_THWGNLPVNL_					0	0	0		ENSG00000114933|ENST00000403263|INO80D	ENSG00000114933|ENST00000403263|INO80D	ENSG00000114933|ENST00000403263|INO80D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.29150390625	2	575.803823	1149.59309	-1.6438	-0.00094652	-1.7236	-0.00099246	-3.3674	-0.001939	575.8027678465652	58.072	0.82617	58.466	58.158	58.985	0.39408					26	19	2	0	0	0	0.37624	1	6124	6124		36.447	0	1	328770			57611	2799	38506	38522	65331	65331					0.02427950083142605
THWPSKPA	8	Unmodified	_THWPSKPA_					0	0	0			REV__ENSG00000188959|ENST00000400613|C9orf152	REV__ENSG00000188959|ENST00000400613|C9orf152	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	461.2650451660156	2	462.240327	922.466101	-0.12346	-5.7068E-05	-1.4375	-0.00066447	-1.561	-0.00072154	462.23929621377704	92.974	0.7551	93.044	92.541	93.296	0.06987					23	17	2	0	0	0	0.4196	1	9659	9659		16.473	9.2798	1	75179	+		57612	23047	38507	38523	65332	65332					0.0017664892880020489
THYIHHYYTE	10	Unmodified	_THYIHHYYTE_					0	0	0			REV__ENST00000361549.2_1_12:108912031-108913249:+|nuORF	REV__ENST00000361549.2_1_12:108912031-108913249:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.717529296875	3	455.207043	1362.5993	-1.5226	-0.00069311	0.2226	0.00010133	-1.3	-0.00059178	455.20717005491576	29.248	0.65068	29.219	28.866	29.517	-0.029207					21	14	2	0	0	0	0.37624	1	1863	1863		14.694	0	1	61119	+		57613	23399	38508	38524	65333	65333					-0.06749576475999675
THYTIVIHPK	10	Unmodified	_THYTIVIHPK_					0	0	0		ENSG00000152527|ENST00000282406|PLEKHH2;nc|ENSG00000152527|Q8IVE3-2|PLEKHH2;ENST00000405223.6_1_2:43871812-43968195:+|nuORF	ENSG00000152527|ENST00000282406|PLEKHH2	ENSG00000152527|ENST00000282406|PLEKHH2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.846435546875	2	604.842948	1207.67134	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.952	1	96.896	96.396	97.396	-0.056381								0	0	0	0.45132	1	10411	10411		25.574	0	1				57614	5181	38509	38525	65334	65334					0.07581382668354308
TIAESAPPGT	10	Unmodified	_TIAESAPPGT_					0	0	0		nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6;ENSG00000253731|ENST00000517434|PCDHGA6	nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6	nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2874755859375	2	472.24019	942.465826	-1.7054	-0.00080534	-2.3365	-0.0011034	-4.0419	-0.0019087	472.24022857252436	95.302	0.32785	95.504	95.353	95.681	0.20242					10	7	2	0	0	0	0.37624	1	9716	9716		40.778	21.418	1	59297			57615	8867	38510	38526	65335	65335					-0.007708155817113038
TIAIAKAW	8	Unmodified	_TIAIAKAW_					0	0	0		ENST00000506481.1_1_4:125356953-125357223:-|nuORF	ENST00000506481.1_1_4:125356953-125357223:-|nuORF	ENST00000506481.1_1_4:125356953-125357223:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26544189453125	2	437.263271	872.511988	1.7622	0.00077054	3.9045	0.0017073	5.6667	0.0024778	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.91005	1	942	942		42.474	8.9589	1	1079000			57616	12937	38511	38527	65336	65336					0.07063294111026153
TIAIAKAW	8	Unmodified	_TIAIAKAW_					0	0	0		ENST00000506481.1_1_4:125356953-125357223:-|nuORF	ENST00000506481.1_1_4:125356953-125357223:-|nuORF	ENST00000506481.1_1_4:125356953-125357223:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2655334472656	2	437.263271	872.511988	2.8534	0.0012477	2.2102	0.00096646	5.0637	0.0022142	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.89962	1	1380	1380		38.806	1.7777	1	21873000			57617	12937	38511	38527	65337	65337					0.07063294111026153
TIALPAVAL	9	Unmodified	_TIALPAVAL_					0	0	0			REV__nc|ENSG00000164418|Q13002-3|GRIK2	REV__nc|ENSG00000164418|Q13002-3|GRIK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7604064941406	2	434.778754	867.542954	-0.67691	-0.00029431	-4.1186	-0.0017907	-4.7955	-0.002085	434.7801315122252	87.685	1.2761	88.148	87.435	88.711	0.46311					39	30	2	0	0	0	0.20789	1	10320	10320		25.45	0	1	62981	+		57618	21081	38512	38528	65338	65338					0.10388447425270897
TIAVKNKT	8	Unmodified	_TIAVKNKT_					0	0	0			REV__nc|ENSG00000165458|O15357-2|INPPL1	REV__nc|ENSG00000165458|O15357-2|INPPL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.934326171875	2	437.77146	873.528367	0.50846	0.00022259	-0.059384	-2.5997E-05	0.44908	0.00019659	437.77135668139107	21.486	0.54584	21.042	20.78	21.326	-0.44324					19	12	2	0	0	0	0.4196	1	760	760		7.1934	0.45781	1	44934	+		57619	21184	38513	38529	65339	65339					0.08654375277126292
TICNKAFH	8	Unmodified	_TICNKAFH_					0	0	0		ENSG00000153266|ENST00000283268|FEZF2	ENSG00000153266|ENST00000283268|FEZF2	ENSG00000153266|ENST00000283268|FEZF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.2330627441406	2	467.234187	932.453822	-0.78555	-0.00036704	-0.89389	-0.00041766	-1.6794	-0.00078469	467.2336097851308	69.799	1.6914	69.762	69.451	71.142	-0.036964					147	87	2	0	0	0	0.92457	1	6802	6802		47.916	1.9636	1	4050000			57620	5227	38514	38530	65340	65340					-0.015107108058941776
TIDALADAI	9	Unmodified	_TIDALADAI_					0	0	0		nc|ENSG00000285292|Q9UG63-2|ABCF2;ENSG00000033050|ENST00000287844|ABCF2	nc|ENSG00000285292|Q9UG63-2|ABCF2	nc|ENSG00000285292|Q9UG63-2|ABCF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.74560546875	2	451.745108	901.475663	-0.010196	-4.6062E-06	1.0103	0.0004564	1.0001	0.0004518	451.7456051590094	33.34	1.2132	33.338	32.979	34.193	-0.0016365					54	27	3	0	0	0	0.51307	1	1985	1985		51.335	7.7094	1	302940			57621	889	38515	38531	65341	65341					0.02098372423665751
TIDGKKPDDI	10	Unmodified	_TIDGKKPDDI_					0	0	0		nc|ENSG00000196083|Q9NPH3-3|IL1RAP;nc|ENSG00000196083|Q9NPH3-2|IL1RAP;ENSG00000196083|ENST00000447382|IL1RAP;nc|ENSG00000196083|Q9NPH3-5|IL1RAP	nc|ENSG00000196083|Q9NPH3-3|IL1RAP	nc|ENSG00000196083|Q9NPH3-3|IL1RAP	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.292236328125	2	551.292953	1100.57135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.49	1	72.527	72.027	73.027	0.037148								0	0	0	0.45132	1	6900	6900		35.152	2.3396	1				57622	8009	38516	38532	65342	65342					0.025091005438980574
TIDPGKFKQ	9	Unmodified	_TIDPGKFKQ_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3167724609375	2	517.287474	1032.5604	-0.38156	-0.00019738	0.11436	5.9159E-05	-0.2672	-0.00013822	517.287423235184	62.689	0.90988	63.077	62.708	63.618	0.38779					35	20	2	0	0	0	0.20789	1	6671	6671		32.812	6.1195	1	201250	+		57623	23015	38517	38533	65343	65343					0.04541742960282136
TIDTWLLY	8	Unmodified	_TIDTWLLY_					0	0	0		ENST00000460544.5_1_3:141905034-141944237:-|nuORF;nc|ENSG00000175066|Q6ZS86-2|GK5;ENSG00000175066|ENST00000392993|GK5	ENST00000460544.5_1_3:141905034-141944237:-|nuORF	ENST00000460544.5_1_3:141905034-141944237:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.7686767578125	2	512.771126	1023.5277	0.15603	8.0008E-05	-4.1778	-0.0021422	-4.0217	-0.0020622	512.7688154099643	38.505	0.9453	38.477	38.129	39.074	-0.027843					50	21	3	0	0	0	0.84634	1	2607	2607		60.294	0.17569	1	477320			57624	6987	38518	38534	65344	65344					0.016875358374363714
TIEFRFQLQ	9	Unmodified	_TIEFRFQLQ_					0	0	0			REV__nc|ENSG00000002746|Q76N89-2|HECW1	REV__nc|ENSG00000002746|Q76N89-2|HECW1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	591.3202514648438	2	591.319306	1180.62406	-2.1672	-0.0012815	3.0968	0.0018312	0.92953	0.00054965	591.320992459415	66.799	0.86491	66.827	66.467	67.332	0.02858					92	41	3	0	0	0	0.67345	1	6338	6338		42.396	1.618	1	233490	+		57625	16047	38519	38535	65345	65345					0.040971033973846716
TIEGLLGLL	9	Unmodified	_TIEGLLGLL_					0	0	0			REV__nc|ENSG00000188672|P18577-4|RHCE	REV__nc|ENSG00000188672|P18577-4|RHCE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7904052734375	2	464.789318	927.564084	-0.5794	-0.0002693	3.5758	0.001662	2.9964	0.0013927	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.76402	1	2192	2192		35.201	1.6851	1	409180	+		57626	23022	38520	38536	65346	65346					0.09740412734140591
TIEGLLGLL	9	Unmodified	_TIEGLLGLL_					0	0	0			REV__nc|ENSG00000188672|P18577-4|RHCE	REV__nc|ENSG00000188672|P18577-4|RHCE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7906188964844	2	464.789318	927.564084	0.19154	8.9025E-05	2.6971	0.0012536	2.8886	0.0013426	464.7904622046614	36.811	0.86831	36.91	36.514	37.382	0.099277					56	23	3	0	0	0	0.7932	1	2086	2086		20.482	1.1219	1	232950	+		57627	23022	38520	38536	65347	65347					0.09740412734140591
TIEGLLGLL	9	Unmodified	_TIEGLLGLL_					0	0	0			REV__nc|ENSG00000188672|P18577-4|RHCE	REV__nc|ENSG00000188672|P18577-4|RHCE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.79150390625	2	464.789318	927.564084	0.1718	7.9849E-05	2.8678	0.0013329	3.0395	0.0014127	464.7905115336865	34.402	1.3055	34.346	33.931	35.236	-0.055149					140	57	3	0	0	0	0.76402	3	1804	1737;1775;1804		35.201	6.3143	1	289420	+		57628	23022	38520	38536	65348;65349;65350	65350					0.09740412734140591
TIEGLLGLL	9	Unmodified	_TIEGLLGLL_					0	0	0			REV__nc|ENSG00000188672|P18577-4|RHCE	REV__nc|ENSG00000188672|P18577-4|RHCE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.79083251953125	2	464.789318	927.564084	0.2474	0.00011499	2.8684	0.0013332	3.1158	0.0014482	464.7904221539816	34.07	1.6806	34.28	33.524	35.204	0.21003					97	40	4	0	0	0	0.76402	1	2493	2493		35.201	1.6851	1	944210	+		57629	23022	38520	38536	65351	65351					0.09740412734140591
TIEGLLGLL	9	Unmodified	_TIEGLLGLL_					0	0	0			REV__nc|ENSG00000188672|P18577-4|RHCE	REV__nc|ENSG00000188672|P18577-4|RHCE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.2923278808594	2	464.789318	927.564084	0.89139	0.00041431	1.9223	0.00089347	2.8137	0.0013078	464.79003742399567	33.921	1.5866	34.225	33.702	35.289	0.30494					91	38	3	0	0	0	0.7932	1	2541	2541		26.796	1.3459	1	1052300	+		57630	23022	38520	38536	65352	65352					0.09740412734140591
TIETVTSW	8	Unmodified	_TIETVTSW_					0	0	0			REV__ENSG00000196099|ENST00000309154|OR6M1	REV__ENSG00000196099|ENST00000309154|OR6M1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.73809814453125	2	468.737283	935.460012	0.53434	0.00025047	0.81357	0.00038135	1.3479	0.00063182	468.73688883898603	74.346	0.80302	74.477	74.16	74.963	0.13126					37	27	2	0	0	0	0.85277	1	6879	6879		25.45	0	1	63809	+		57631	23090	38521	38537	65353	65353					-0.010299140933739181
TIFLSLGG	8	Unmodified	_TIFLSLGG_					0	0	0		ENST00000610253.5_1_11:108042863-108061204:-|nuORF;ENSG00000149308|ENST00000278612|NPAT	ENST00000610253.5_1_11:108042863-108061204:-|nuORF	ENST00000610253.5_1_11:108042863-108061204:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.2320556640625	2	404.234179	806.453805	0.76489	0.0003092	-3.732	-0.0015086	-2.9671	-0.0011994	404.2325671203917	85.114	3.6255	85.042	83.452	87.078	-0.07196					165	83	2	0	0	0	0.86288	1	8683	8683		26.796	1.3459	1	4970800			57632	5018	38522	38538	65354	65354					0.04283612465758324
TIFLSLGG	8	Unmodified	_TIFLSLGG_					0	0	0		ENST00000610253.5_1_11:108042863-108061204:-|nuORF;ENSG00000149308|ENST00000278612|NPAT	ENST00000610253.5_1_11:108042863-108061204:-|nuORF	ENST00000610253.5_1_11:108042863-108061204:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.23199462890625	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.90465	1	8244	8244		40.573	5.3719	1	4227600			57633	5018	38522	38538	65355	65355					0.04283612465758324
TIFSLSTLL	9	Unmodified	_TIFSLSTLL_					0	0	0		ENST00000557504.1_1_14:77718073-77723066:+|nuORF;ENSG00000165548|ENST00000298351|TMEM63C	ENST00000557504.1_1_14:77718073-77723066:+|nuORF	ENST00000557504.1_1_14:77718073-77723066:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.7955017089844	2	497.794601	993.574648	-0.62467	-0.00031096	3.2042	0.0015951	2.5796	0.0012841	497.7959443257759	48.896	1.0734	48.921	48.637	49.71	0.025574					60	26	3	0	0	0	0.7932	1	3756	3756		24.203	3.7209	1	414050			57634	6094	38523	38539	65356	65356					0.07760395388584129
TIGDGHSYK	9	Unmodified	_TIGDGHSYK_					0	0	0			REV__ENSG00000144357|ENST00000272793|UBR3	REV__ENSG00000144357|ENST00000272793|UBR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.23638916015625	2	489.237981	976.461409	-0.084851	-4.1512E-05	-2.5411	-0.0012432	-2.626	-0.0012847	489.23659515743003	63.847	1.1575	63.846	63.508	64.665	-0.00078583					92	41	3	0	0	0	0.71772	1	5980	5980		39.253	2.8061	1	760060	+		57635	19884	38524	38540	65357	65357					-0.027762800046275515
TIGIHPVC	8	Unmodified	_TIGIHPVC_					0	0	0		nc|ENSG00000198431|Q16881-3|TXNRD1;nc|ENSG00000198431|Q16881-7|TXNRD1;nc|ENSG00000198431|Q16881-5|TXNRD1;ENST00000529546.5_1_12:104682722-104742190:+|nuORF;nc|ENSG00000198431|Q16881-2|TXNRD1;nc|ENSG00000198431|Q16881-4|TXNRD1;ENST00000526390.5_1_12:104683270-104742190:+|nuORF;ENST00000524698.5_2_12:104681148-104742190:+|nuORF;ENST00000526950.1_1_12:104703637-104742190:+|nuORF;ENST00000526691.5_1_12:104680955-104742190:+|nuORF;nc|ENSG00000198431|Q16881-6|TXNRD1;ENSG00000198431|ENST00000525566|TXNRD1;ENST00000525566.5_2_12:104609571-104742190:+|nuORF	nc|ENSG00000198431|Q16881-3|TXNRD1	nc|ENSG00000198431|Q16881-3|TXNRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.22698974609375	2	420.225831	838.437109	2.4843	0.001044	2.4469	0.0010283	4.9312	0.0020722	420.2267464660918	78.729	5.7464	78.781	77.062	82.809	0.051674					450	174	4	0	0	0	0.91005	2	8028	7830;8028		44.531	10.52	1	961790			57636	15199	38525	38541	65358;65359	65359					0.011427883081637447
TIGRFFVK	8	Unmodified	_TIGRFFVK_					0	0	0			REV__ENSG00000145832|ENST00000681962|SLC25A48	REV__ENSG00000145832|ENST00000681962|SLC25A48	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.287841796875	2	484.28982	966.565087	-0.75446	-0.00036538	-1.5156	-0.00073399	-2.2701	-0.0010994	484.2891912957526	94.428	0.99274	94.474	94.135	95.128	0.046173					42	23	2	0	0	0	0.86288	1	9949	9949		26.796	8.4717	1	329720	+		57637	19970	38526	38542	65360	65360					0.08046671893714574
TIGVVCFA	8	Unmodified	_TIGVVCFA_					0	0	0			REV__nc|ENSG00000196704|Q86W34-5|AMZ2	REV__nc|ENSG00000196704|Q86W34-5|AMZ2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.2256774902344	2	405.214932	808.415311	1.4697	0.00059553	4.0347	0.0016349	5.5044	0.0022305	405.2165784244618	24.27	0.51799	23.756	23.494	24.012	-0.51365					17	11	2	0	0	0	0.4196	1	1155	1155		13.775	0	1	58482	+		57638	23164	38527	38543	65361	65361					0.0034398355959410765
TIHLNTATTK	10	Unmodified	_TIHLNTATTK_					0	0	0			REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|121|3|sense	REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|121|3|sense	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.3078002929688	2	550.308938	1098.60332	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.882	1	57.961	57.461	58.461	0.079643								0	0	0	0.45132	1	4906	4906		30.318	1.1682	1		+		57639	29649	38528	38544	65362	65362					0.05796513017685356
TIHRRKRRRR	10	Unmodified	_TIHRRKRRRR_					0	0	0		nc|ENSG00000062650|Q7Z5K2-2|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9754943847656	3	478.974893	1433.90285	-0.085376	-4.0893E-05	-1.2112	-0.00058014	-1.2966	-0.00062103	479.30837143687245	43.044	1.6592	42.994	42.147	43.806	-0.050308					106	44	4	0	0	0	0.89708	1	2950	2950		9.6461	1.2389	1	375540			57640	14761	38529	38545	65363	65363					0.20325287933292202
TIHRRVHTG	9	Unmodified	_TIHRRVHTG_					0	0	0		nc|ENSG00000198182|Q96SK3-2|ZNF607;nc|ENSG00000198182|Q96SK3-3|ZNF607;ENSG00000198182|ENST00000355202|ZNF607	nc|ENSG00000198182|Q96SK3-2|ZNF607	nc|ENSG00000198182|Q96SK3-2|ZNF607	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.806640625	2	538.807231	1075.59991	2.2674	0.0012217	-3.269	-0.0017614	-1.0016	-0.00053969	538.805403172641	90.754	4.353	90.686	89.396	93.749	-0.068222					240	103	4	0	0	0	0.77696	1	9488	9488		31.53	0	1	835060			57641	8250	38530	38546	65364	65364					0.06513307754357811
TIIELLVVG	9	Unmodified	_TIIELLVVG_					0	0	0			REV__nc|ENSG00000198001|Q9NWZ3-2|IRAK4	REV__nc|ENSG00000198001|Q9NWZ3-2|IRAK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8036804199219	2	478.804968	955.595384	-1.2382	-0.00059286	1.4969	0.00071673	0.2587	0.00012387	478.80558529591235	40.624	1.0284	40.581	39.923	40.951	-0.042892					45	26	2	0	0	0	0.7932	1	2951	2951		24.203	0	1	267990	+		57642	23286	38531	38547	65365	65365					0.11580985768250684
TIIFVETKR	9	Unmodified	_TIIFVETKR_					0	0	0		nc|ENSG00000100201|Q92841-3|DDX17;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;ENSG00000100201|ENST00000403230|DDX17;ENST00000497196.5_1_22:38889517-38891019:-|nuORF	nc|ENSG00000100201|Q92841-3|DDX17	nc|ENSG00000100201|Q92841-3|DDX17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.830810546875	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.7932	1	9208	9208		20.947	0.95016	1	5453100			57643	14810	38532	38548	65366	65366					0.10094577919812764
TIIILYRTRKK	11	Unmodified	_TIIILYRTRKK_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|48|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|48|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|48|1|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	469.30535888671875	3	468.973161	1403.89765	-0.72768	-0.00034126	-4.1426	-0.0019428	-4.8703	-0.002284	468.971108040395	48.851	1.8477	48.826	48.183	50.03	-0.025112					104	41	4	0	0	0	0.18293	1	4119	4119		8.0344	3.1482	1	717440			57644	14700	38533	38549	65367	65367					0.21186126507427616
TIIILYRTRKK	11	Unmodified	_TIIILYRTRKK_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|48|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|48|1|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|48|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.9708251953125	3	468.973161	1403.89765	-0.32674	-0.00015323	-4.1476	-0.0019451	-4.4744	-0.0020984	468.97108105597175	48.857	1.6348	48.764	48.126	49.761	-0.093178					121	39	4	0	0	0	0.81407	1	3729	3729		8.4073	0.60274	1	745890			57645	14700	38533	38549	65368	65368					0.21186126507427616
TIILDDEL	8	Unmodified	_TIILDDEL_					0	0	0		ENSG00000173757|ENST00000293328|STAT5B;ENST00000468312.1_1_17:40370167-40384145:-|nuORF;nc|ENSG00000126561|P42229-2|STAT5A;ENSG00000126561|ENST00000590949|STAT5A	ENSG00000173757|ENST00000293328|STAT5B	ENSG00000173757|ENST00000293328|STAT5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.25384521484375	2	466.252766	930.490978	0.14963	6.9764E-05	1.8728	0.0008732	2.0224	0.00094297	466.2534991696802	60.959	1.2686	60.926	59.804	61.072	-0.032509					71	38	2	0	0	0	0.884	1	5766	5766		33.516	3.0119	1	239520			57646	6883	38534	38550	65369	65369					0.02295239220870826
TIILHPRY	8	Unmodified	_TIILHPRY_					0	0	0		nc|ENSG00000145244|Q9Y5Q5-2|CORIN;ENSG00000145244|ENST00000273857|CORIN	nc|ENSG00000145244|Q9Y5Q5-2|CORIN	nc|ENSG00000145244|Q9Y5Q5-2|CORIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8003845214844	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.87922	1	3275	3275		31.955	0	1	412810			57647	4758	38535	38551	65370	65370					0.08122056922411502
TIILKGIKT	9	Unmodified	_TIILKGIKT_					0	0	0			REV__nc|ENSG00000177200|Q3L8U1-2|CHD9	REV__nc|ENSG00000177200|Q3L8U1-2|CHD9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.7674560546875	2	493.83406	985.653567	-0.87304	-0.00043114	0.51154	0.00025262	-0.3615	-0.00017852	493.83429184337524	38.565	0.45652	39.087	38.83	39.287	0.52235					17	10	2	0	0	0	0.20789	1	3218	3218		2.5243	0	1	128730	+		57648	22190	38536	38552	65371	65371					0.1601666741352119
TIILSGLPVY	10	Unmodified	_TIILSGLPVY_					0	0	0		ENST00000563489.1_1_16:87866578-87870352:-|nuORF;ENSG00000103257|ENST00000261622|SLC7A5	ENST00000563489.1_1_16:87866578-87870352:-|nuORF	ENST00000563489.1_1_16:87866578-87870352:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3270874023438	2	538.323525	1074.6325	3.5632	0.0019181	3.6305	0.0019544	7.1937	0.0038725	538.3254567289116	104.65	1.3425	104.61	103.89	105.23	-0.04039					91	31	4	0	0	0	0.86718	1	11508	11508		27.882	5.9224	1	777430			57649	2070	38537	38553	65372	65372					0.09816657313990618
TIILVLPTG	9	Unmodified	_TIILVLPTG_					0	0	0			REV__ENSG00000221882|ENST00000573901|OR3A2	REV__ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.800048828125	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3460	3460		21.96	2.5999	1	1516700	+		57650	23712	38538	38554	65373	65373					0.119050031137931
TIILYFIPL	9	Unmodified	_TIILYFIPL_					0	0	0		nc|ENSG00000140563|Q6DN12-3|MCTP2;ENST00000456504.5_1_15:94858078-95022260:+|nuORF;ENSG00000140563|ENST00000357742|MCTP2;nc|ENSG00000140563|Q6DN12-2|MCTP2	nc|ENSG00000140563|Q6DN12-3|MCTP2	nc|ENSG00000140563|Q6DN12-3|MCTP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8407592773438	2	546.838811	1091.66307	0.84844	0.00046396	0.94515	0.00051684	1.7936	0.0009808	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.76402	1	10790	10790		35.201	0	1	43597000			57651	4448	38539	38555	65374	65374					0.12090435699042246
TIINKLTIM	9	Unmodified	_TIINKLTIM_					0	0	0			REV__ENST00000439936.6_1_17:17150867-17152334:-|nuORF	REV__ENST00000439936.6_1_17:17150867-17152334:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.8203125	2	523.817553	1045.62055	3.6756	0.0019253	2.123	0.0011121	5.7986	0.0030374	523.8186030353656	104.57	1.3629	104.79	103.76	105.12	0.22681					58	32	2	0	0	0	0.78983	1	12769	12769		27.882	2.4321	1	220220	+		57652	26736	38540	38556	65375	65375					0.09956717299132833
TIIPSERKKH	10	Unmodified	_TIIPSERKKH_					0	0	0		ENSG00000172244|ENST00000306862|C5orf34;ENST00000514462.1_1_5:43505848-43515051:-|nuORF	ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5747985839844	3	403.575178	1207.70371	-1.7546	-0.00070812	0.79854	0.00032227	-0.95608	-0.00038585	403.5753957959939	82.91	2.3624	83.036	82.324	84.686	0.12601					158	54	4	0	0	0	0.83456	1	7931	7931		37.508	6.9393	1	1090300			57653	6755	38541	38557	65376	65376					0.10816170071370834
TIIPSERKKH	10	Unmodified	_TIIPSERKKH_					0	0	0		ENSG00000172244|ENST00000306862|C5orf34;ENST00000514462.1_1_5:43505848-43515051:-|nuORF	ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.5746765136719	3	403.575178	1207.70371	0.82597	0.00033334	-2.2428	-0.00090514	-1.4168	-0.0005718	403.5742849619775	82.098	2.6206	82.524	81.753	84.373	0.42646					188	63	3	0	0	0	0.83456	1	9607	9607		37.508	4.7576	1	14382000			57654	6755	38541	38557	65377	65377					0.10816170071370834
TIIPSERKKH	10	Unmodified	_TIIPSERKKH_					0	0	0		ENSG00000172244|ENST00000306862|C5orf34;ENST00000514462.1_1_5:43505848-43515051:-|nuORF	ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5748596191406	3	403.575178	1207.70371	-0.098768	-3.986E-05	-1.4245	-0.00057487	-1.5232	-0.00061473	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.86225	1	9623	9623		32.751	1.1163	1	16485000			57655	6755	38541	38557	65378	65378					0.10816170071370834
TIIRYYRRYKV	11	Unmodified	_TIIRYYRRYKV_					0	0	0		ENSG00000176658|ENST00000318217|MYO1D;ENST00000585094.1_1_17:30986131-31048108:-|nuORF	ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.79400634765625	3	510.968299	1529.88307	0.21519	0.00010996	0.57213	0.00029234	0.78732	0.0004023	511.3011359926996	26.252	0.71324	25.994	25.682	26.395	-0.25721					31	15	3	0	0	0	0.18408	1	1442	1442		3.4087	0.19739	1	147720			57656	7093	38542	38558	65379	65379					0.13932054359293033
TIISARRN	8	Unmodified	_TIISARRN_					0	0	0			REV__nc|ENSG00000132874|Q15849-2|SLC14A2	REV__nc|ENSG00000132874|Q15849-2|SLC14A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77801513671875	2	465.777608	929.540663	-1.4399	-0.00067067	1.3241	0.00061674	-0.1158	-5.3938E-05	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.87479	1	7590	7590		30.504	0	1	287800	+		57657	19040	38543	38559	65380	65380					0.07307411740180214
TIIVLLPLGL	10	Unmodified	_TIIVLLPLGL_					0	0	0			REV__ENSG00000235750|ENST00000423313|KIAA0040	REV__ENSG00000235750|ENST00000423313|KIAA0040	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3610229492188	2	526.359911	1050.70527	-1.5676	-0.00082514	3.904	0.0020549	2.3364	0.0012298	526.3617973555264	35.031	1.6441	35.031	34.615	36.259	0					148	43	4	0	0	0	0.86201	1	1895	1895		24.203	1.1603	1	1307600	+		57658	23786	38544	38560	65381	65381					0.18194411107424457
TIIVSLALP	9	Unmodified	_TIIVSLALP_					0	0	0			REV__ENST00000563601.1_1_10:17685748-17685853:-|nuORF	REV__ENST00000563601.1_1_10:17685748-17685853:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8001708984375	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3017	3017		17.365	0.89182	1	942760	+		57659	28821	38545	38561	65382	65382					0.11905003113804469
TIIWKHKG	8	Unmodified	_TIIWKHKG_					0	0	0		nc|ENSG00000149294|P13591-6|NCAM1;nc|ENSG00000149294|P13591-5|NCAM1;nc|ENSG00000149294|P13591-4|NCAM1;nc|ENSG00000149294|P13591-3|NCAM1;nc|ENSG00000149294|P13591-1|NCAM1;ENSG00000149294|ENST00000316851|NCAM1	nc|ENSG00000149294|P13591-6|NCAM1	nc|ENSG00000149294|P13591-6|NCAM1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7970275878906	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.104	1	59.096	58.596	59.596	-0.0074387								0	0	0	0.29344	1	5058	5058		31.955	0	1				57660	5015	38546	38562	65383	65383					0.08446074267999393
TIKAGRIPPL	10	Unmodified	_TIKAGRIPPL_					0	0	0		ENSG00000155754|ENST00000439140|C2CD6;nc|ENSG00000155754|Q53TS8-3|C2CD6;nc|ENSG00000155754|Q53TS8-1|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.3394165039062	2	533.342584	1064.67061	-0.032114	-1.7128E-05	-4.3492	-0.0023196	-4.3813	-0.0023367	533.3401574901603	99.358	2.6654	99.408	98.928	101.59	0.04982					178	62	4	0	0	0	0.8545	1	10636	10636		36.447	4.4919	1	2530900			57661	5338	38547	38563	65384	65384					0.1408658801931324
TIKFPVRN	8	Unmodified	_TIKFPVRN_					0	0	0			REV__nc|ENSG00000186038|A5X5Y0-2|HTR3E	REV__nc|ENSG00000186038|A5X5Y0-2|HTR3E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7903747558594	2	487.792727	973.5709	-0.70733	-0.00034503	-3.6605	-0.0017856	-4.3678	-0.0021306	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.87922	1	8118	8118		31.955	5.1588	1	2348200	+		57662	22818	38548	38564	65385	65385					0.08305770405377189
TIKHVKILMNV	11	Unmodified	_TIKHVKILMNV_					0	0	0		ENST00000407925.5_1_2:33534602-33540264:+|nuORF	ENST00000407925.5_1_2:33534602-33540264:+|nuORF	ENST00000407925.5_1_2:33534602-33540264:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	647.8648071289062	2	648.397033	1294.77951	-1.1411	-0.00073989	-4.4653	-0.0028953	-5.6064	-0.0036352	648.3942178782094	113.09	0.20975	113.06	113.01	113.22	-0.032333					11	5	3	0	0	0	0.17347	1	12074	12074		29.17	17.534	1	3176500			57663	11290	38549	38565	65386	65386					0.14391430927298643
TIKKGLSRPGH	11	Unmodified	_TIKKGLSRPGH_					0	0	0			REV__ENST00000449202.5_2_2:29341150-29344258:+|nuORF	REV__ENST00000449202.5_2_2:29341150-29344258:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.3616333007812	2	597.359296	1192.70404	-0.24184	-0.00014447	-1.7236	-0.0010296	-1.9655	-0.0011741	597.3578636523395	100.56	3.0718	100.56	99.06	102.13	0					172	73	4	0	0	0	0.66009	1	10279	10279		37.508	3.5865	1	2923800	+		57664	26850	38550	38566	65387	65387					0.11539589791232174
TIKSKVSGG	9	Unmodified	_TIKSKVSGG_					0	0	0		nc|ENSG00000170777|Q96J77|TPD52L3	nc|ENSG00000170777|Q96J77|TPD52L3	nc|ENSG00000170777|Q96J77|TPD52L3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.7632751464844	2	438.761092	875.507631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.412	1	63.412	62.912	63.912	0								0	0	0	0.32758	1	5559	5559		20.947	0.4651	1				57665	15089	38551	38567	65388	65388					0.06489784897485151
TIKSVQLWFF	10	Unmodified	_TIKSVQLWFF_					0	0	0			REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|35|1|sense	REV__MER4-int_dup1826|chrX:154813046-154816311:-|2.70214033708279|0.1414171065003757|4.26|63.0|35|1|sense	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5755310058594	3	423.572775	1267.69649	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.471	1	17.389	16.889	17.889	-0.0821								0	0	0	0.45132	1	233	233		21.686	0.8486	1		+		57666	29652	38552	38568	65389	65389					0.07335437470919715
TIKVIRRMQYF	11	Unmodified	_TIKVIRRMQYF_					0	0	0		nc|ENSG00000053918|P51787-2|KCNQ1;ENSG00000053918|ENST00000155840|KCNQ1	nc|ENSG00000053918|P51787-2|KCNQ1	nc|ENSG00000053918|P51787-2|KCNQ1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	485.28594970703125	3	485.614868	1453.82277	-0.60495	-0.00029377	3.7646	0.0018282	3.1597	0.0015344	485.6166990227849	58.016	1.1567	57.999	57.686	58.843	-0.01643					88	52	2	0	0	0	0.17729	1	4975	4975		12.957	0	1	142380			57667	1013	38553	38569	65390	65390					0.11401620704555171
TILANADTSTP	11	Unmodified	_TILANADTSTP_					0	0	0		ENSG00000164151|ENST00000296564|ICE1	ENSG00000164151|ENST00000296564|ICE1	ENSG00000164151|ENST00000296564|ICE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.2814331054688	2	552.282586	1102.55062	0.29404	0.00016239	1.4731	0.00081354	1.7671	0.00097594	552.2832808011796	25.646	0.64706	25.605	25.332	25.979	-0.04117					22	17	2	0	0	0	0.74763	1	1120	1120		22.58	0	1	49260			57668	5926	38554	38570	65391	65391					0.00344510164222811
TILAPQRERLL	11	Unmodified	_TILAPQRERLL_					0	0	0			REV__ENST00000481733.1_1_X:19373527-19373620:+|nuORF	REV__ENST00000481733.1_1_X:19373527-19373620:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2673645019531	3	437.269866	1308.78777	-1.6775	-0.00073351	-2.9878	-0.0013065	-4.6653	-0.00204	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.75121	1	4589	4589		21.78	4.6137	1	2305800	+		57669	27447	38555	38571	65392	65392					0.1457270116827658
TILATAPLL	9	Unmodified	_TILATAPLL_					0	0	0			REV__ENST00000334530.9_2_8:21999056-21999167:-|nuORF	REV__ENST00000334530.9_2_8:21999056-21999167:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7911682128906	2	456.791861	911.569169	0.068918	3.1481E-05	2.6574	0.0012139	2.7263	0.0012454	456.79291839387025	47.945	1.4401	47.936	47.69	49.13	-0.0093269					51	37	2	0	0	0	0.7932	1	3942	3942		24.203	4.8428	1	229540	+		57670	25159	38556	38572	65393	65393					0.10984716596738053
TILATAPLL	9	Unmodified	_TILATAPLL_					0	0	0			REV__ENST00000334530.9_2_8:21999056-21999167:-|nuORF	REV__ENST00000334530.9_2_8:21999056-21999167:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79296875	2	456.791861	911.569169	-2.1986	-0.0010043	3.4286	0.0015662	1.23	0.00056186	456.7933193778514	39.928	2.2	40.296	39.048	41.248	0.36797					193	55	5	0	0	0	0.74721	1	3308	3308		37.159	3.6435	1	10973000	+		57671	25159	38556	38572	65394	65394					0.10984716596738053
TILATVPLV	9	Unmodified	_TILATVPLV_					0	0	0		nc|ENSG00000072310|P36956-6|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-2|SREBF1;ENSG00000072310|ENST00000261646|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;ENST00000470247.1_1_17:17721556-17722545:-|nuORF	nc|ENSG00000072310|P36956-6|SREBF1	nc|ENSG00000072310|P36956-6|SREBF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80047607421875	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	1	2835	2835		17.365	0.89182	1	489490			57672	1273	38557	38573	65395	65395					0.119050031137931
TILEVKPI	8	Unmodified	_TILEVKPI_					0	0	0			REV__ENSG00000173517|ENST00000682557|PEAK1	REV__ENSG00000173517|ENST00000682557|PEAK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7915344238281	2	456.791861	911.569169	0.05486	2.506E-05	2.6152	0.0011946	2.6701	0.0012197	456.79295826454774	49.784	2.1713	49.788	48.709	50.88	0.0035973					85	53	2	0	0	0	0.87922	1	4188	4188		31.955	0	1	208660	+		57673	21929	38558	38574	65396	65396					0.10984716596760791
TILHDPHLL	9	Unmodified	_TILHDPHLL_					0	0	0			REV__nc|ENSG00000157538|O14972-2|VPS26C	REV__nc|ENSG00000157538|O14972-2|VPS26C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7822265625	2	529.803291	1057.59203	0.51802	0.00027445	-1.6095	-0.0008527	-1.0914	-0.00057825	529.802694222383	51.789	0.20469	52.456	52.312	52.517	0.66729					6	4	2	0	0	0	0.20789	1	5165	5165		21.96	0	1	124680	+		57674	20548	38559	38575	65397	65397					0.06553735714237519
TILHELKRRRL	11	Unmodified	_TILHELKRRRL_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3083190917969	3	478.972043	1433.8943	0.26149	0.00012524	4.3734	0.0020947	4.6349	0.00222	478.9741674058618	42.954	1.6917	43.019	42.201	43.892	0.065037					93	45	3	0	0	0	0.79224	3	2919	2919;2931;2944		12.957	1.9593	1	530890	+		57675	23196	38560	38576	65398;65399;65400	65398					0.19470876453442543
TILIKNSIH	9	Unmodified	_TILIKNSIH_					0	0	0		chr12:132621364-132621475|26|11.65|0.3|5.28|+|ENST00000542301|P2RX2,P2RX2;nc|ENSG00000187848|Q9UBL9-2|P2RX2;nc|ENSG00000187848|Q9UBL9-3|P2RX2;ENSG00000187848|ENST00000643471|P2RX2;nc|ENSG00000187848|Q9UBL9-4|P2RX2;nc|ENSG00000187848|Q9UBL9-5|P2RX2;chr12:132618921-132619844|23|13.35|0.0|11.75|+|ENST00000351222|P2RX2,P2RX2;nc|ENSG00000187848|Q9UBL9-6|P2RX2;chr12:132618921-132619439|15|10.73|0.02|8.79|+|ENST00000352418|P2RX2,P2RX2	chr12:132621364-132621475|26|11.65|0.3|5.28|+|ENST00000542301|P2RX2,P2RX2	chr12:132621364-132621475|26|11.65|0.3|5.28|+|ENST00000542301|P2RX2,P2RX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.818115234375	2	519.818941	1037.62333	0.066288	3.4458E-05	-1.3041	-0.00067792	-1.2379	-0.00064346	519.8181781419161	84.428	1.8402	84.864	83.581	85.421	0.43538					115	44	4	0	0	0	0.30689	1	9776	9776		64.207	5.4253	1	6841200			57676	115	38561	38577	65401	65401					0.10602308748320866
TILIKNSIH	9	Unmodified	_TILIKNSIH_					0	0	0		chr12:132621364-132621475|26|11.65|0.3|5.28|+|ENST00000542301|P2RX2,P2RX2;nc|ENSG00000187848|Q9UBL9-2|P2RX2;nc|ENSG00000187848|Q9UBL9-3|P2RX2;ENSG00000187848|ENST00000643471|P2RX2;nc|ENSG00000187848|Q9UBL9-4|P2RX2;nc|ENSG00000187848|Q9UBL9-5|P2RX2;chr12:132618921-132619844|23|13.35|0.0|11.75|+|ENST00000351222|P2RX2,P2RX2;nc|ENSG00000187848|Q9UBL9-6|P2RX2;chr12:132618921-132619439|15|10.73|0.02|8.79|+|ENST00000352418|P2RX2,P2RX2	chr12:132621364-132621475|26|11.65|0.3|5.28|+|ENST00000542301|P2RX2,P2RX2	chr12:132621364-132621475|26|11.65|0.3|5.28|+|ENST00000542301|P2RX2,P2RX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8187866210938	2	519.818941	1037.62333	-0.067594	-3.5137E-05	-1.1183	-0.00058132	-1.1859	-0.00061646	519.8182715270425	84.44	1.4919	84.888	84.056	85.547	0.44736					111	36	4	0	0	0	0.25483	2	9874	9862;9874		68.787	0	1	7125200			57677	115	38561	38577	65402;65403	65403					0.10602308748320866
TILIPPNHGVF	11	Unmodified	_TILIPPNHGVF_					0	0	0		ENST00000471799.1_1_22:26886916-26887635:+|nuORF	ENST00000471799.1_1_22:26886916-26887635:+|nuORF	ENST00000471799.1_1_22:26886916-26887635:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3665771484375	2	604.345323	1206.67609	1.0461	0.00063219	-4.0162	-0.0024272	-2.9701	-0.001795	604.3434445447326	104.35	0.58376	104.52	104.18	104.77	0.17095					26	14	3	0	0	0	0.17457	1	11094	11094		51.193	17.02	1	737820			57678	12250	38562	38578	65404	65404					0.08102266811101799
TILIPPNHGVF	11	Unmodified	_TILIPPNHGVF_					0	0	0		ENST00000471799.1_1_22:26886916-26887635:+|nuORF	ENST00000471799.1_1_22:26886916-26887635:+|nuORF	ENST00000471799.1_1_22:26886916-26887635:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3667602539062	2	604.345323	1206.67609	0.9043	0.00054651	2.8577	0.001727	3.762	0.0022736	604.3468856807947	105.11	0.48383	105.22	104.98	105.47	0.10766					17	11	2	0	0	0	0.17457	1	11219	11219		51.193	28.613	1	148770			57679	12250	38562	38578	65405	65405					0.08102266811101799
TILKFITQAFK	11	Unmodified	_TILKFITQAFK_					0	0	0			REV__nc|ENSG00000182132|Q9NZI2-4|KCNIP1	REV__nc|ENSG00000182132|Q9NZI2-4|KCNIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26763916015625	3	437.267463	1308.78056	0.78044	0.00034126	-0.10112	-4.4216E-05	0.67932	0.00029704	437.26733211231357	49.246	1.5472	50.15	49.725	51.272	0.90424					125	37	5	0	0	0	0.74002	1	4819	4819		24.276	3.2437	1	5667400	+		57680	30076	38563	38579	65406	65406					0.13851968567837503
TILKQYFLISK	11	Unmodified	_TILKQYFLISK_					0	0	0		L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.943115234375	3	451.942868	1352.80677	-0.06697	-3.0266E-05	0.83508	0.00037741	0.76811	0.00034714	451.9431207678107	53.546	2.822	53.541	51.391	54.213	-0.0053711					204	73	4	0	0	0	0.78083	1	4692	4692		15.337	0.0043666	1	724120			57681	14588	38564	38580	65407	65407					0.14448237739316028
TILKQYFLISK	11	Unmodified	_TILKQYFLISK_					0	0	0		L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9433288574219	3	451.942868	1352.80677	0.2172	9.8162E-05	0.464	0.0002097	0.6812	0.00030786	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.73647	1	4731	4731		25.068	5.8051	1	771970			57682	14588	38564	38580	65408	65408					0.14448237739316028
TILKQYFLISK	11	Unmodified	_TILKQYFLISK_					0	0	0		L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.2793884277344	3	451.942868	1352.80677	0.3266	0.00014761	0.22689	0.00010254	0.55349	0.00025015	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.76384	1	4497	4497		18.966	0	1	721610			57683	14588	38564	38580	65409	65409					0.14448237739316028
TILKQYFLISK	11	Unmodified	_TILKQYFLISK_					0	0	0		L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|5|1|sense	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9432678222656	3	451.942868	1352.80677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.261	1	54.343	53.843	54.843	0.081524								0	0	0	0.56276	1	4479	4479		24.276	3.2437	1				57684	14588	38564	38580	65410	65410					0.14448237739316028
TILLKERKRYL	11	Unmodified	_TILLKERKRYL_					0	0	0			REV__ENST00000393667.7_1_3:121448147-121448746:-|nuORF	REV__ENST00000393667.7_1_3:121448147-121448746:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.3021545410156	3	478.304799	1431.89257	-0.88095	-0.00042136	-3.3033	-0.00158	-4.1842	-0.0020013	478.30312855267334	66.875	1.0299	67.008	66.517	67.547	0.13326					107	42	3	0	0	0	0.76384	2	5929	5929;5964		18.966	2.4062	1	324080	+		57685	26061	38565	38581	65411;65412	65411					0.1938982264484821
TILLKERKRYL	11	Unmodified	_TILLKERKRYL_					0	0	0			REV__ENST00000393667.7_1_3:121448147-121448746:-|nuORF	REV__ENST00000393667.7_1_3:121448147-121448746:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.3032531738281	3	478.304799	1431.89257	0.47684	0.00022808	-4.2941	-0.0020539	-3.8172	-0.0018258	478.3025280059543	66.964	1.0029	67.09	66.677	67.68	0.12649					108	40	3	0	0	0	0.76892	1	5977	5977		17.833	8.187	1	331170	+		57686	26061	38565	38581	65413	65413					0.1938982264484821
TILLKERKRYL	11	Unmodified	_TILLKERKRYL_					0	0	0			REV__ENST00000393667.7_1_3:121448147-121448746:-|nuORF	REV__ENST00000393667.7_1_3:121448147-121448746:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.6376037597656	3	478.304799	1431.89257	-0.94284	-0.00045096	-3.1255	-0.0014949	-4.0683	-0.0019459	478.63764981735454	66.982	1.088	67.034	66.688	67.776	0.052376					96	41	3	0	0	0	0.77803	1	5988	5988		15.921	3.4878	1	269070	+		57687	26061	38565	38581	65414	65414					0.1938982264484821
TILLTIIAM	9	Unmodified	_TILLTIIAM_					0	0	0		ENSG00000196542|ENST00000620149|SPTSSB	ENSG00000196542|ENST00000620149|SPTSSB	ENSG00000196542|ENST00000620149|SPTSSB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.8143005371094	2	494.809196	987.60384	5.3576	0.002651	1.6685	0.00082558	7.0261	0.0034766	494.80991916847967	109.97	1.0052	110.04	109.81	110.82	0.067993					49	40	2	0	0	0	0.72402	1	13363	13363		38.806	4.6336	1	350830			57688	8071	38566	38582	65415	65415					0.10954216413199447
TILNNYNEL	9	Unmodified	_TILNNYNEL_					0	0	0			REV__ENSG00000196437|ENST00000316950|ZNF569	REV__ENSG00000196437|ENST00000316950|ZNF569	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.280517578125	2	547.279846	1092.54514	-0.40224	-0.00022014	0.14254	7.8008E-05	-0.2597	-0.00014213	547.2799131640894	53.631	0.91662	54.045	53.663	54.58	0.4139					36	21	2	0	0	0	0.24527	2	5442	5420;5442		69.628	12.907	1	760690	+		57689	23131	38567	38583	65416;65417	65417					0.002568313724395921
TILNPAFKW	9	Unmodified	_TILNPAFKW_					0	0	0			REV__nc|ENSG00000060069|Q9Y5B0-4|CTDP1	REV__nc|ENSG00000060069|Q9Y5B0-4|CTDP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3049926757812	2	545.30821	1088.60187	0.097389	5.3107E-05	-3.8453	-0.0020969	-3.7479	-0.0020438	545.3060338932492	60.05	0.61361	60.144	59.8	60.414	0.094063					27	19	2	0	0	0	0.76255	1	5180	5180		35.618	1.4457	1	133080	+		57690	16447	38568	38584	65418	65418					0.06110923719620587
TILPAVSLP	9	Unmodified	_TILPAVSLP_					0	0	0			REV__ENSG00000204687|ENST00000377127|MAS1L	REV__ENSG00000204687|ENST00000377127|MAS1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.78558349609375	2	455.784036	909.553519	0.24537	0.00011184	1.5761	0.00071834	1.8214	0.00083018	455.7845952256007	43.663	2.0162	43.719	42.984	45	0.056747					86	48	2	0	0	0	0.78536	1	3012	3012		29.15	3.6994	1	228040	+		57691	23516	38569	38585	65419	65419					0.09512430079701062
TILPMPPR	8	Oxidation (M)	_TILPM(Oxidation (M))PPR_		TILPM(1)PPR		TILPM(50)PPR	0	0	1			REV__nc|ENSG00000135540|Q5SYE7|NHSL1	REV__nc|ENSG00000135540|Q5SYE7|NHSL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.76904296875	2	470.767863	939.521173	0.3235	0.00015229	2.3285	0.0010962	2.652	0.0012485	470.7688399761902	50.705	1.3688	50.755	50.372	51.741	0.049896					94	42	3	0	0	0	0.92973	1	4015	4015		50.025	7.5501	1	1304900	+		57692	29866	38570	38586	65420	65420					0.04899319405069491
TILRIMKH	8	Unmodified	_TILRIMKH_					0	0	0			REV__ENSG00000114480|ENST00000429644|GBE1	REV__ENSG00000114480|ENST00000429644|GBE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.3077697753906	2	506.310229	1010.60591	0.1012	5.1237E-05	-2.7976	-0.0014165	-2.6964	-0.0013652	506.81022509860003	49.29	2.3799	49.287	48.52	50.9	-0.0030327					95	61	3	0	0	0	0.87064	1	4073	4073		29.15	1.2673	1	213010	+		57693	18050	38571	38587	65421	65421					0.10102689941686549
TILRIMKH	8	Unmodified	_TILRIMKH_					0	0	0			REV__ENSG00000114480|ENST00000429644|GBE1	REV__ENSG00000114480|ENST00000429644|GBE1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3066711425781	2	506.310229	1010.60591	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.244	1	51.294	50.794	51.794	0.049896								0	0	0	0.29871	1	4070	4070		23.042	1.0826	1		+		57694	18050	38571	38587	65422	65422					0.10102689941686549
TILSVVATV	9	Unmodified	_TILSVVATV_					0	0	0			REV__ENSG00000184984|ENST00000383263|CHRM5	REV__ENSG00000184984|ENST00000383263|CHRM5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.7792663574219	2	451.781493	901.548434	-1.1974	-0.00054094	-1.7737	-0.00080132	-2.971	-0.0013423	451.7806721299916	86.886	1.0382	86.886	86.517	87.555	0					40	23	2	0	0	0	0.76255	1	8332	8332		35.618	0	1	157750	+		57695	22719	38572	38588	65423	65423					0.09372126217090226
TILTFSGT	8	Unmodified	_TILTFSGT_					0	0	0			REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	REV__nc|ENSG00000168631|Q3MIW9-2|MUCL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2273864746094	2	420.229094	838.443634	-0.18765	-7.8855E-05	-2.6467	-0.0011122	-2.8344	-0.0011911	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.884	1	7871	7871		33.516	4.366	1	743780	+		57696	21507	38573	38589	65424	65424					0.01795004740540662
TILTPLFNPM	10	Unmodified	_TILTPLFNPM_					0	0	0		ENSG00000173285|ENST00000641535|OR10K1	ENSG00000173285|ENST00000641535|OR10K1	ENSG00000173285|ENST00000641535|OR10K1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.81640625	2	573.81501	1145.61547	0.47618	0.00027324	3.0441	0.0017467	3.5203	0.00202	573.8166032618375	36.182	1.0397	36.213	35.726	36.765	0.031132					71	29	3	0	0	0	0.76096	1	1941	1941		41.427	0	1	967530			57697	6849	38574	38590	65425	65425					0.04848413436548071
TILVIPGSL	9	Unmodified	_TILVIPGSL_					0	0	0		ENSG00000221931|ENST00000327930|OR6X1	ENSG00000221931|ENST00000327930|OR6X1	ENSG00000221931|ENST00000327930|OR6X1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79132080078125	2	456.791861	911.569169	-0.77088	-0.00035213	3.6137	0.0016507	2.8428	0.0012986	456.7934149314151	47.886	0.97208	47.859	47.644	48.616	-0.026737					41	25	2	0	0	0	0.7932	1	4024	4024		21.96	3.6355	1	216120			57698	8686	38575	38591	65426	65426					0.10984716596760791
TINEIAIQL	9	Unmodified	_TINEIAIQL_					0	0	0			REV__nc|ENSG00000141458|O15118-2|NPC1	REV__nc|ENSG00000141458|O15118-2|NPC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.79241943359375	2	507.795132	1013.57571	0.23267	0.00011815	-0.46143	-0.00023431	-0.22876	-0.00011616	507.7945361012725	60.144	0.94435	60.697	60.16	61.104	0.55323					47	25	3	0	0	0	0.24527	1	6379	6379		69.628	2.134	1	529790	+		57699	19688	38576	38592	65427	65427					0.06946609757483202
TINNSIKR	8	Unmodified	_TINNSIKR_					0	0	0			REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	REV__ENST00000587624.5_1_7:64601607-64646883:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	473.2148132324219	2	473.277441	944.540328	-0.27918	-0.00013213	-4.2692	-0.0020205	-4.5484	-0.0021526	473.27529035102054	49.083	0.6479	49.543	49.223	49.871	0.45983					32	15	3	0	0	0	0.4196	1	4724	4724		21.96	0	1	939960	+		57700	20158	38577	38593	65428	65428					0.06583992020318874
TINSLIKQKTG	11	Unmodified	_TINSLIKQKTG_					0	0	0		ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	601.8583984375	2	601.858795	1201.70304	-0.18175	-0.00010939	-1.1536	-0.00069431	-1.3354	-0.0008037	601.857878566198	103.66	2.1239	103.66	103.29	105.42	0					107	51	3	0	0	0	0.67778	1	10673	10673		35.152	1.2304	1	1055100			57701	3562	38578	38594	65429	65429					0.11025330631650831
TINSLIKQKTG	11	Unmodified	_TINSLIKQKTG_					0	0	0		ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.8582763671875	2	601.858795	1201.70304	-0.51505	-0.00030999	-1.3715	-0.00082545	-1.8865	-0.0011354	601.8578575542072	103.62	2.2032	103.62	103.26	105.47	-0.0035706					116	52	4	0	0	0	0.7144	1	11166	11166		29.17	1.2878	1	1418100			57702	3562	38578	38594	65430	65430					0.11025330631650831
TINSLIKQKTG	11	Unmodified	_TINSLIKQKTG_					0	0	0		ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.8582763671875	2	601.858795	1201.70304	-0.24099	-0.00014504	-1.5802	-0.00095104	-1.8212	-0.0010961	601.8577844533773	103.4	2.3202	103.45	103.07	105.39	0.041481					122	55	4	0	0	0	0.7144	1	11253	11253		29.17	0.020503	1	1412200			57703	3562	38578	38594	65431	65431					0.11025330631650831
TINSLIKQKTG	11	Unmodified	_TINSLIKQKTG_					0	0	0		ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	601.8582763671875	2	601.858795	1201.70304	-1.2832	-0.00077232	-0.42174	-0.00025383	-1.705	-0.0010262	601.8583669122717	103.38	2.0705	103.5	103.11	105.18	0.11494					139	51	4	0	0	0	0.7144	1	10960	10960		29.17	0	1	2503700			57704	3562	38578	38594	65432	65432					0.11025330631650831
TIPILEIK	8	Unmodified	_TIPILEIK_					0	0	0		ENSG00000111666|ENST00000229266|CHPT1	ENSG00000111666|ENST00000229266|CHPT1	ENSG00000111666|ENST00000229266|CHPT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8005676269531	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.84341	1	3696	3696		24.203	1.1603	1	1294000			57705	2597	38579	38595	65433	65433					0.119050031137931
TIPILEIK	8	Unmodified	_TIPILEIK_					0	0	0		ENSG00000111666|ENST00000229266|CHPT1	ENSG00000111666|ENST00000229266|CHPT1	ENSG00000111666|ENST00000229266|CHPT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8009033203125	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.87479	1	3216	3216		30.504	6.3009	1	1231300			57706	2597	38579	38595	65434	65434					0.119050031137931
TIPKGGKME	9	Unmodified	_TIPKGGKME_					0	0	0			REV__ENSG00000114124|ENST00000682958|GRK7	REV__ENSG00000114124|ENST00000682958|GRK7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.7601318359375	2	480.762778	959.511002	0.74146	0.00035647	-3.9838	-0.0019153	-3.2424	-0.0015588	480.7606994615689	25.649	1.757	25.392	24.684	26.441	-0.2572					90	39	4	0	0	0	0.41566	1	1309	1309		56.721	3.7844	1	2336600	+		57707	18032	38580	38596	65435	65435					0.029627116798337738
TIPKTVPMA	9	Unmodified	_TIPKTVPMA_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2767639160156	2	479.275521	956.536489	0.83201	0.00039876	3.0426	0.0014583	3.8747	0.001857	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.58668	1	9092	9092		47.657	10.498	1	7289200	+		57708	23163	38581	38597	65436	65436					0.05648186202245142
TIPKTVPMA	9	Unmodified	_TIPKTVPMA_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.278076171875	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.41566	1	10126	10126		56.721	17.468	1	5642300	+		57709	23163	38581	38597	65437	65437					0.05648186202245142
TIPLLVLLGL	10	Unmodified	_TIPLLVLLGL_					0	0	0		ENST00000477401.5_1_7:14660999-14880939:-|nuORF;ENST00000403963.5_1_7:14249142-14880939:-|nuORF;nc|ENSG00000136267|Q9Y6T7-2|DGKB;chr7:14736194-14757655|34|32.74|0.77|5.41|-|ENST00000407950|DGKB,DGKB;ENSG00000136267|ENST00000402815|DGKB;nc|ENSG00000136267|Q9Y6T7|DGKB	ENST00000477401.5_1_7:14660999-14880939:-|nuORF	ENST00000477401.5_1_7:14660999-14880939:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3611450195312	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.84874	1	1808	1808		18.324	0.95945	1	1221500			57710	494	38582	38598	65438	65438					0.1819441110740172
TIPLLVLLGL	10	Unmodified	_TIPLLVLLGL_					0	0	0		ENST00000477401.5_1_7:14660999-14880939:-|nuORF;ENST00000403963.5_1_7:14249142-14880939:-|nuORF;nc|ENSG00000136267|Q9Y6T7-2|DGKB;chr7:14736194-14757655|34|32.74|0.77|5.41|-|ENST00000407950|DGKB,DGKB;ENSG00000136267|ENST00000402815|DGKB;nc|ENSG00000136267|Q9Y6T7|DGKB	ENST00000477401.5_1_7:14660999-14880939:-|nuORF	ENST00000477401.5_1_7:14660999-14880939:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.361083984375	2	526.359911	1050.70527	1.0713	0.00056389	1.2303	0.0006476	2.3016	0.0012115	526.360423923534	32.788	1.6436	32.999	32.422	34.066	0.21168					152	38	5	0	0	0	0.85939	1	2446	2446		23.042	1.0826	1	7743700			57711	494	38582	38598	65439	65439					0.1819441110740172
TIPPELVK	8	Unmodified	_TIPPELVK_					0	0	0		ENSG00000058729|ENST00000283109|RIOK2	ENSG00000058729|ENST00000283109|RIOK2	ENSG00000058729|ENST00000283109|RIOK2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.77825927734375	2	448.776211	895.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.723	1	67.723	67.223	68.223	0								0	0	0	0.29245	1	5991	5991		30.504	1.3541	1				57712	1047	38583	38599	65440	65440					0.08592143562668753
TIPQGCGH	8	Unmodified	_TIPQGCGH_					0	0	0			REV__ENST00000530561.5_1_11:58294929-58321330:-|nuORF	REV__ENST00000530561.5_1_11:58294929-58321330:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.6885070800781	2	406.689613	811.364672	0.28379	0.00011541	-3.914	-0.0015918	-3.6302	-0.0014764	406.68799140261245	28.549	0.68845	28.585	28.255	28.944	0.03607					36	23	2	0	0	0	0.89457	1	1352	1352		37.028	7.1869	1	63299	+		57713	17787	38584	38600	65441	65441					-0.048555457654060774
TIPSEPLL	8	Unmodified	_TIPSEPLL_					0	0	0			REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25439453125	2	435.252569	868.490584	-1.2943	-0.00056337	-1.5363	-0.00066866	-2.8306	-0.001232	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.86288	1	7875	7875		26.796	2.5934	1	1788100	+		57714	26872	38585	38601	65442	65442					0.05107864291676378
TIPSEPLLI	9	Unmodified	_TIPSEPLLI_					0	0	0			REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	REV__ENST00000450728.1_1_2:200334820-200335477:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79656982421875	2	491.794601	981.574648	0.019467	9.5736E-06	2.4962	0.0012276	2.5157	0.0012372	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.7932	1	4393	4393		18.324	0	1	310050	+		57715	26872	38586	38602	65443	65443					0.08312395388577443
TIQLKSPLQ	9	Unmodified	_TIQLKSPLQ_					0	0	0		ENSG00000067445|ENST00000173898|TRO;nc|ENSG00000067445|Q12816-2|TRO	ENSG00000067445|ENST00000173898|TRO	ENSG00000067445|ENST00000173898|TRO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.281982421875	2	514.310949	1026.60735	-0.35584	-0.00018301	-0.676	-0.00034767	-1.0318	-0.00053069	514.3105340277814	48.736	1.0105	49.196	48.779	49.789	0.45983					37	24	2	0	0	0	0.20789	1	4773	4773		49.442	0	1	207250			57716	1184	38587	38603	65444	65444					0.09510602511409161
TIQLLRKF	8	Unmodified	_TIQLLRKF_					0	0	0		nc|ENSG00000024526|Q5TB30-2|DEPDC1;chr1:68481612-68483950|63|143.13|0.32|8.79|-|ENST00000370966|DEPDC1,DEPDC1;ENSG00000024526|ENST00000456315|DEPDC1;ENST00000421655.1_1_9:108520752-108520932:+|nuORF	nc|ENSG00000024526|Q5TB30-2|DEPDC1	nc|ENSG00000024526|Q5TB30-2|DEPDC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.6339111328125	2	509.824027	1017.6335	-0.053266	-2.7156E-05	-3.9572	-0.0020175	-4.0105	-0.0020447	509.8218553003409	104.12	0.77007	104.12	103.82	104.59	-0.0035782					24	17	2	0	0	0	0.4196	1	11263	11263		20.482	0	1	71145			57717	55	38588	38604	65445	65445					0.12538916473556583
TIQSLKDTKTT	11	Unmodified	_TIQSLKDTKTT_					0	0	0		nc|ENSG00000086065|Q9NZZ3-2|CHMP5;ENSG00000086065|ENST00000223500|CHMP5	nc|ENSG00000086065|Q9NZZ3-2|CHMP5	nc|ENSG00000086065|Q9NZZ3-2|CHMP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.345947265625	2	618.345717	1234.67688	-0.32375	-0.00020019	0.67493	0.00041734	0.35117	0.00021715	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.61369	1	10361	10361		42.864	11.334	1	926440			57718	1552	38589	38605	65446	65446					0.06893016669505414
TIQSLKDTKTT	11	Unmodified	_TIQSLKDTKTT_					0	0	0		nc|ENSG00000086065|Q9NZZ3-2|CHMP5;ENSG00000086065|ENST00000223500|CHMP5	nc|ENSG00000086065|Q9NZZ3-2|CHMP5	nc|ENSG00000086065|Q9NZZ3-2|CHMP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.3453369140625	2	618.345717	1234.67688	0.55169	0.00034113	-0.2507	-0.00015502	0.30099	0.00018612	618.3454418699644	97.724	3.0702	97.772	96.827	99.897	0.048157					199	71	4	0	0	0	0.6493	1	10380	10380		38.754	4.832	1	831610			57719	1552	38589	38605	65447	65447					0.06893016669505414
TIQYKWVQ	8	Unmodified	_TIQYKWVQ_					0	0	0		ENST00000564814.1_1_16:58426144-58426288:+|nuORF	ENST00000564814.1_1_16:58426144-58426288:+|nuORF	ENST00000564814.1_1_16:58426144-58426288:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.7832641601562	2	533.290017	1064.56548	-0.22029	-0.00011748	-0.50533	-0.00026949	-0.72563	-0.00038697	533.2900314748352	79.118	0.8931	79.667	79.192	80.085	0.54945					39	20	3	0	0	0	0.4196	1	9028	9028		33.516	0	1	416390			57720	13894	38590	38606	65448	65448					0.03578046822894976
TIRDPGKH	8	Unmodified	_TIRDPGKH_					0	0	0			REV__ENST00000466854.5_1_3:122084438-122085314:-|nuORF	REV__ENST00000466854.5_1_3:122084438-122085314:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	462.25439453125	2	462.256508	922.498464	0.31476	0.0001455	-1.9686	-0.00091001	-1.6539	-0.00076451	462.2554437313544	50.747	0.65531	50.797	50.487	51.142	0.049896					38	22	2	0	0	0	0.86677	1	3992	3992		27.882	3.6795	1	260120	+		57721	27138	38591	38607	65449	65449					0.03411436331805362
TIRFHLRF	8	Unmodified	_TIRFHLRF_					0	0	0		ENST00000481456.1_1_6:31509365-31509719:-|nuORF	ENST00000481456.1_1_6:31509365-31509719:-|nuORF	ENST00000481456.1_1_6:31509365-31509719:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3174438476562	2	545.319443	1088.62433	-1.465	-0.00079892	-3.6309	-0.00198	-5.096	-0.0027789	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.89494	1	8566	8566		37.159	4.3467	1	4998200			57722	12461	38592	38608	65450	65450					0.08356567907890167
TIRFKKSF	8	Unmodified	_TIRFKKSF_					0	0	0		nc|ENSG00000144452|Q86UK0-2|ABCA12;ENSG00000144452|ENST00000272895|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8084106445312	2	513.808377	1025.6022	-1.3833	-0.00071076	2.6514	0.0013623	1.2681	0.00065157	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.79929	1	4377	4377		18.324	0.95945	1	1148600			57723	4708	38593	38609	65451	65451					0.09042343439477918
TIRFLVMAYRK	11	Unmodified	_TIRFLVMAYRK_					0	0	0			REV__ENSG00000188394|ENST00000616002|GPR21	REV__ENSG00000188394|ENST00000616002|GPR21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.6083984375	3	466.607713	1396.80131	-1.7237	-0.0008043	2.2593	0.0010542	0.53559	0.00024991	466.60870138635494	100.22	2.0707	100.39	99.305	101.38	0.17199					124	48	3	0	0	0	0.76892	1	10319	10319		17.833	3.1395	1	463800	+		57724	23000	38594	38610	65452	65452					0.11878235675840187
TIRKYYKHL	9	Unmodified	_TIRKYYKHL_					0	0	0		L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3536376953125	2	611.358765	1220.70298	-0.40504	-0.00024762	-3.36	-0.0020541	-3.765	-0.0023018	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.69624	1	9971	9971		40.778	2.9666	1	12417000			57725	14637	38595	38611	65453	65453					0.10145375422325742
TIRKYYKHL	9	Unmodified	_TIRKYYKHL_					0	0	0		L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3544311523438	2	611.358765	1220.70298	-1.2523	-0.00076561	-3.3028	-0.0020192	-4.5551	-0.0027848	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.67345	1	9485	9485		42.396	1.618	1	5978100			57726	14637	38595	38611	65454	65454					0.10145375422325742
TIRKYYKHL	9	Unmodified	_TIRKYYKHL_					0	0	0		L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3556518554688	2	611.358765	1220.70298	-1.2523	-0.00076562	-2.4483	-0.0014968	-3.7006	-0.0022624	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.77696	1	9753	9753		31.53	3.6476	1	16503000			57727	14637	38595	38611	65455	65455					0.10145375422325742
TIRNALALIRQ	11	Unmodified	_TIRNALALIRQ_					0	0	0			REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	635.3917846679688	2	634.893503	1267.77245	-0.0069402	-4.4063E-06	-1.6425	-0.0010428	-1.6494	-0.0010472	634.892540884512	106	2.3661	106	105.24	107.61	0					246	54	6	0	0	0	0.66929	1	11181	11181		36.447	0.82846	1	31286000	+		57728	27558	38596	38612	65456	65456					0.1492783437106482
TIRNALALIRQ	11	Unmodified	_TIRNALALIRQ_					0	0	0			REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.89306640625	2	634.893503	1267.77245	-0.13084	-8.307E-05	-1.4622	-0.00092832	-1.593	-0.0010114	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.39037	1	11567	11567		60.118	15.741	1	40768000	+		57729	27558	38596	38612	65457	65457					0.1492783437106482
TIRNALALIRQ	11	Unmodified	_TIRNALALIRQ_					0	0	0			REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.5976867675781	3	423.598094	1267.77245	2.8995	0.0012282	-3.9608	-0.0016778	-1.0614	-0.0004496	423.59633167604096	105.75	2.8231	105.79	105.08	107.9	0.038322					212	66	5	0	0	0	0.72106	1	11539	11539		19.627	0	1	6928400	+		57730	27558	38596	38612	65458	65458					0.1492783437106482
TIRNALALIRQ	11	Unmodified	_TIRNALALIRQ_					0	0	0			REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8929443359375	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.61369	2	11199	11199;11309		42.864	3.6114	1	66671000	+		57731	27558	38596	38612	65459;65460	65459					0.1492783437106482
TIRNALALIRQ	11	Unmodified	_TIRNALALIRQ_					0	0	0			REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	REV__ENST00000486700.1_1_2:128403737-128409326:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8930053710938	2	634.893503	1267.77245	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.67	1	107.71	107.21	108.21	0.036125								0	0	0	0.56276	1	11500	11500		36.447	1.2947	1		+		57732	27558	38596	38612	65461	65461					0.1492783437106482
TIRNLVLQVC	10	Unmodified	_TIRNLVLQVC_					0	0	0		chr3:102477041-102477443|14|28.0|0.19|7.17|+|0|ZPLD1,ZPLD1|1	chr3:102477041-102477443|14|28.0|0.19|7.17|+|0|ZPLD1,ZPLD1|1	chr3:102477041-102477443|14|28.0|0.19|7.17|+|0|ZPLD1,ZPLD1|1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	579.8389282226562	2	579.836808	1157.65906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.437	1	65.564	65.064	66.064	0.12733								0	0	0	0.45132	1	5805	5805		20.947	0.10978	1				57733	381	38597	38613	65462	65462					0.08654022933660599
TIRSLKRLWI	10	Unmodified	_TIRSLKRLWI_					0	0	0		ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4042358398438	2	643.408789	1284.80303	0.024155	1.5542E-05	-4.3274	-0.0027843	-4.3033	-0.0027688	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.54701	4	11103	10934;10970;11091;11103		52.937	7.723	1	11188000			57734	9461	38598	38614	65463;65464;65465;65466	65466					0.17201612756139184
TIRSLKRLWI	10	Unmodified	_TIRSLKRLWI_					0	0	0		ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4058837890625	2	643.408789	1284.80303	0.024153	1.554E-05	-2.8	-0.0018015	-2.7758	-0.001786	643.4073313468332	107.75	0.43301	107.75	107.4	107.83	0					29	10	3	0	0	0	0.86348	1	11204	11204		31.53	3.4483	1	6606600			57735	9461	38598	38614	65467	65467					0.17201612756139184
TIRSLKRLWI	10	Unmodified	_TIRSLKRLWI_					0	0	0		ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4058837890625	2	643.408789	1284.80303	-0.02708	-1.7423E-05	-4.4647	-0.0028726	-4.4917	-0.00289	643.4057840301668	105.94	1.5968	105.91	105.23	106.82	-0.025146					165	37	6	0	0	0	0.80179	6	11453	11407;11453;11477;11563;11575;11599		39.253	4.1008	1	14580000			57736	9461	38598	38614	65468;65469;65470;65471;65472;65473	65469					0.17201612756139184
TIRSLKRLWI	10	Unmodified	_TIRSLKRLWI_					0	0	0		ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	643.4061279296875	2	643.408789	1284.80303	-0.027625	-1.7774E-05	-2.8132	-0.00181	-2.8408	-0.0018278	643.4069538956494	107.53	1.1842	107.49	106.64	107.82	-0.034401					87	27	4	0	0	0	0.77314	3	11701	11701;11724;11737		40.778	9.2484	1	2502500			57737	9461	38598	38614	65474;65475;65476	65474					0.17201612756139184
TIRSLKRLWI	10	Unmodified	_TIRSLKRLWI_					0	0	0		ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4058227539062	2	643.408789	1284.80303	1.777	0.0011433	-4.4559	-0.002867	-2.6789	-0.0017236	643.4059831518348	106.95	1.1451	106.98	106.72	107.86	0.03688					79	26	4	0	0	0	0.86272	2	11718	11718;11757		31.53	3.4483	1	1597700			57738	9461	38598	38614	65477;65478	65477					0.17201612756139184
TIRSLKRLWI	10	Unmodified	_TIRSLKRLWI_					0	0	0		ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.40576171875	2	643.408789	1284.80303	-1.1464	-0.0007376	-3.4117	-0.0021951	-4.5581	-0.0029327	643.406459620359	105.63	1.1927	105.7	104.97	106.16	0.073112					153	29	6	0	0	0	0.6116	2	11164	11164;11200		49.442	20.292	1	22367000			57739	9461	38598	38614	65479;65480	65479					0.17201612756139184
TIRSLKRLWI	10	Unmodified	_TIRSLKRLWI_					0	0	0		ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.40625	2	643.408789	1284.80303	-1.1464	-0.0007376	-2.6841	-0.001727	-3.8305	-0.0024646	643.4069214023369	106.26	1.0134	106.32	106.14	107.15	0.053749					110	23	5	0	0	0	0.6116	6	11307	11286;11295;11307;11356;11391;11411		49.442	17.912	1	13678000			57740	9461	38598	38614	65481;65482;65483;65484;65485;65486	65483					0.17201612756139184
TIRSLKRLWI	10	Unmodified	_TIRSLKRLWI_					0	0	0		ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	ENST00000263377.6_1_19:15379807-15383627:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.406494140625	2	643.408789	1284.80303	-1.1464	-0.00073758	-1.7594	-0.001132	-2.9057	-0.0018696	643.4076175151858	107.74	0.83601	107.77	107.1	107.93	0.036125					77	20	5	0	0	0	0.82886	2	11446	11446;11468		37.812	8.6415	1	3329000			57741	9461	38598	38614	65487;65488	65487					0.17201612756139184
TISFLTKVVFV	11	Unmodified	_TISFLTKVVFV_					0	0	0		ENST00000534417.1_1_11:43457781-43465839:+|nuORF	ENST00000534417.1_1_11:43457781-43465839:+|nuORF	ENST00000534417.1_1_11:43457781-43465839:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.384521484375	2	627.378832	1252.74311	0.9795	0.00061452	4.2538	0.0026687	5.2333	0.0032833	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.7144	4	12543	12543;12676;13102;13153		29.17	9.1733	1	19815000			57742	13408	38599	38615	65489;65490;65491;65492	65489					0.126848773022175
TISITATAAS	10	Unmodified	_TISITATAAS_					0	0	0		ENSG00000162383|ENST00000371494|SLC1A7;ENSG00000079215|ENST00000265113|SLC1A3;ENSG00000105143|ENST00000594383|SLC1A6	ENSG00000162383|ENST00000371494|SLC1A7	ENSG00000162383|ENST00000371494|SLC1A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.25604248046875	2	468.25584	934.497126	-1.0017	-0.00046905	-1.0561	-0.00049453	-2.0578	-0.00096358	468.2552173631195	81.886	3.8728	82.031	80.973	84.845	0.14513					157	90	2	0	0	0	0.86218	1	7894	7894		32.812	6.1195	1	195040			57743	5681	38600	38616	65493	65493					0.02725757452367361
TISLRRATT	9	Unmodified	_TISLRRATT_					0	0	0			REV__ENSG00000170456|ENST00000389082|DENND5B	REV__ENSG00000170456|ENST00000389082|DENND5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8037109375	2	509.803823	1017.59309	0.68681	0.00035014	-0.92116	-0.00046961	-0.23436	-0.00011948	509.80326235241614	86.403	4.313	86.552	84.994	89.307	0.14902					345	101	5	0	0	0	0.77696	1	8528	8528		31.53	0	1	3017600	+		57744	21662	38601	38617	65494	65494					0.08499950083125896
TISNSDSH	8	Unmodified	_TISNSDSH_					0	0	0		ENST00000434391.6_1_1:26796443-26796557:+|nuORF	ENST00000434391.6_1_1:26796443-26796557:+|nuORF	ENST00000434391.6_1_1:26796443-26796557:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.69195556640625	2	430.690864	859.367175	1.5813	0.00068106	0.12859	5.5383E-05	1.7099	0.00073645	430.6908313309935	99.723	1.6572	100.06	99.226	100.88	0.33294					76	41	2	0	0	0	0.90983	1	12044	12044		42.396	3.59	1	623510			57745	11694	38602	38618	65495	65495					-0.06813418826754969
TISNSDSH	8	Unmodified	_TISNSDSH_					0	0	0		ENST00000434391.6_1_1:26796443-26796557:+|nuORF	ENST00000434391.6_1_1:26796443-26796557:+|nuORF	ENST00000434391.6_1_1:26796443-26796557:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	430.6923828125	2	430.690864	859.367175	2.1826	0.00094002	-1.8456	-0.00079488	0.337	0.00014514	430.6905802018216	99.794	1.5439	100.16	99.29	100.83	0.36292					92	38	4	0	0	0	0.93786	1	12106	12106		53.351	7.3995	1	707790			57746	11694	38602	38618	65496	65496					-0.06813418826754969
TISSNVASKA	10	Unmodified	_TISSNVASKA_					0	0	0		ENSG00000172867|ENST00000309680|KRT2;CON__P35908v2;CON__P35908	ENSG00000172867|ENST00000309680|KRT2	ENSG00000172867|ENST00000309680|KRT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.26788330078125	2	489.266739	976.518924	-0.2253	-0.00011023	-0.49216	-0.0002408	-0.71746	-0.00035103	489.26639090249495	28.873	0.8001	28.833	28.439	29.239	-0.039906					32	27	2	0	0	0	0.8545	1	1482	1482		36.447	5.9431	1	35519		+	57747	599	38603	38619	65497	65497					0.029725622009550534
TISVYCLL	8	Unmodified	_TISVYCLL_					0	0	0			REV__nc|ENSG00000077238|P24394-3|IL4R	REV__nc|ENSG00000077238|P24394-3|IL4R	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30108642578125	2	456.248972	910.48339	1.0716	0.00048893	3.2434	0.0014798	4.3151	0.0019687	456.25035682541437	34.09	0.53625	34.395	34.035	34.571	0.30494					15	12	2	0	0	0	0.4196	1	2534	2534		37.028	0	1	129350	+		57748	16740	38604	38620	65498	65498					0.02456808419594836
TITASLFV	8	Unmodified	_TITASLFV_					0	0	0			REV__ENST00000485978.1_1_9:136338979-136343630:-|nuORF	REV__ENST00000485978.1_1_9:136338979-136343630:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.24566650390625	2	426.247286	850.48002	-0.1821	-7.7619E-05	-2.626	-0.0011193	-2.8081	-0.0011969	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.86288	1	8825	8825		26.796	3.7536	1	3805200	+		57749	27536	38605	38621	65499	65499					0.04879881637236849
TITASSAKK	9	Unmodified	_TITASSAKK_					0	0	0			REV__nc|ENSG00000155966|P51816-7|AFF2	REV__nc|ENSG00000155966|P51816-7|AFF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.7655029296875	2	453.766374	905.518196	-1.8618	-0.00084484	0.23657	0.00010735	-1.6253	-0.00073749	453.76637939924865	41.209	0.88986	41.209	40.877	41.766	0					61	26	3	0	0	0	0.55097	1	2779	2779		49.442	5.3247	1	304750	+		57750	20457	38606	38622	65500	65500					0.0616576755190863
TITASSAKK	9	Unmodified	_TITASSAKK_					0	0	0			REV__nc|ENSG00000155966|P51816-7|AFF2	REV__nc|ENSG00000155966|P51816-7|AFF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7659606933594	2	453.766374	905.518196	-1.6067	-0.00072906	-0.612	-0.00027771	-2.2187	-0.0010068	453.76606039248026	41.272	1.9725	41.906	41.675	43.648	0.6339					112	50	4	0	0	0	0.44421	1	3639	3639		54.776	5.3348	1	8512600	+		57751	20457	38606	38622	65501	65501					0.0616576755190863
TITLIPPN	8	Unmodified	_TITLIPPN_					0	0	0		ENST00000381322.5_1_4:56376111-56411651:-|nuORF	ENST00000381322.5_1_4:56376111-56411651:-|nuORF	ENST00000381322.5_1_4:56376111-56411651:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.75982666015625	2	434.760561	867.506569	-0.16641	-7.2351E-05	-2.965	-0.0012891	-3.1314	-0.0013614	434.75945112998903	87.697	3.829	87.765	85.858	89.687	0.067711					171	89	4	0	0	0	0.87479	1	8911	8911		30.504	2.2494	1	1344400			57752	10952	38607	38623	65502	65502					0.06751570528570028
TITRTRLTG	9	Unmodified	_TITRTRLTG_					0	0	0			REV__ENST00000397497.8_2_8:27296606-27296834:+|nuORF	REV__ENST00000397497.8_2_8:27296606-27296834:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8038024902344	2	509.803823	1017.59309	-0.89954	-0.00045859	0.77889	0.00039708	-0.12065	-6.1507E-05	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.77244	2	8227	8227;8376		32.812	4.5581	1	1874600	+		57753	26168	38608	38624	65503;65504	65503					0.08499950083137264
TIVENLRL	8	Unmodified	_TIVENLRL_					0	0	0			REV__ENST00000206423.7_2_3:112317611-112317761:-|nuORF	REV__ENST00000206423.7_2_3:112317611-112317761:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2884521484375	2	479.290017	956.565481	1.1411	0.00054692	-3.8612	-0.0018506	-2.7201	-0.0013037	479.28802767290887	16.959	0.34087	16.472	16.326	16.667	-0.48718					17	7	3	0	0	0	0.89494	1	189	189		37.159	1.5408	1	564860	+		57754	24106	38609	38625	65505	65505					0.0854604682289164
TIVGAFSL	8	Unmodified	_TIVGAFSL_					0	0	0		nc|ENSG00000088002|O00204-2|SULT2B1;ENSG00000088002|ENST00000201586|SULT2B1	nc|ENSG00000088002|O00204-2|SULT2B1	nc|ENSG00000088002|O00204-2|SULT2B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.232666015625	2	404.234179	806.453805	0.76489	0.0003092	-3.732	-0.0015086	-2.9671	-0.0011994	404.2325671203917	85.114	3.6255	85.042	83.452	87.078	-0.07196					165	83	2	0	0	0	0.91977	1	8778	8778		45.952	5.3793	1	4970800			57755	1582	38610	38626	65506	65506					0.04283612465758324
TIVGAFSL	8	Unmodified	_TIVGAFSL_					0	0	0		nc|ENSG00000088002|O00204-2|SULT2B1;ENSG00000088002|ENST00000201586|SULT2B1	nc|ENSG00000088002|O00204-2|SULT2B1	nc|ENSG00000088002|O00204-2|SULT2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.23260498046875	2	404.234179	806.453805	-1.8204	-0.00073588	-0.96943	-0.00039188	-2.7898	-0.0011278	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.87479	1	8249	8249		30.504	3.7075	1	4754100			57756	1582	38610	38626	65507	65507					0.04283612465758324
TIVGAFSL	8	Unmodified	_TIVGAFSL_					0	0	0		nc|ENSG00000088002|O00204-2|SULT2B1;ENSG00000088002|ENST00000201586|SULT2B1	nc|ENSG00000088002|O00204-2|SULT2B1	nc|ENSG00000088002|O00204-2|SULT2B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2327880859375	2	404.234179	806.453805	-1.8251	-0.00073778	-1.1309	-0.00045714	-2.956	-0.0011949	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.87922	3	8230	8230;8242;8254		31.955	5.1588	1	3315300			57757	1582	38610	38626	65508;65509;65510	65508					0.04283612465758324
TIVGSLPLVC	10	Unmodified	_TIVGSLPLVC_					0	0	0			REV__ENST00000273590.3_1_3:49452419-49452602:+|nuORF	REV__ENST00000273590.3_1_3:49452419-49452602:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2906188964844	2	501.288628	1000.5627	-0.50311	-0.0002522	4.0857	0.0020481	3.5826	0.0017959	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.71042	2	8846	8822;8846		44.117	3.5442	1	10459000	+		57758	24557	38611	38627	65511;65512	65512					0.06244455373735036
TIVGSLPLVC	10	Unmodified	_TIVGSLPLVC_					0	0	0			REV__ENST00000273590.3_1_3:49452419-49452602:+|nuORF	REV__ENST00000273590.3_1_3:49452419-49452602:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904052734375	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.71042	2	8932	8873;8932		44.117	6.9577	1	9566900	+		57759	24557	38611	38627	65513;65514	65514					0.06244455373735036
TIVLEIKP	8	Unmodified	_TIVLEIKP_					0	0	0			REV__ENSG00000162753|ENST00000367714|SLC9C2	REV__ENSG00000162753|ENST00000367714|SLC9C2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7919616699219	2	456.791861	911.569169	-1.4626	-0.0006681	4.253	0.0019428	2.7904	0.0012746	456.7937012430135	38.803	1.6993	38.814	37.946	39.646	0.011173					92	39	3	0	0	0	0.82658	1	2772	2772		21.96	3.6355	1	2267400	+		57760	20845	38612	38628	65515	65515					0.10984716596749422
TIVLEIKP	8	Unmodified	_TIVLEIKP_					0	0	0			REV__ENSG00000162753|ENST00000367714|SLC9C2	REV__ENSG00000162753|ENST00000367714|SLC9C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.79180908203125	2	456.791861	911.569169	-2.8446	-0.0012994	3.6569	0.0016705	0.81235	0.00037108	456.79337927026637	41.437	2.022	41.851	41.294	43.316	0.4139					109	52	4	0	0	0	0.8621	2	3605	3605;3626		30.504	4.733	1	8003100	+		57761	20845	38612	38628	65516;65517	65516					0.10984716596749422
TIVMSTLPT	9	Unmodified	_TIVMSTLPT_					0	0	0			REV__CON__Q3T052	REV__CON__Q3T052	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.7649230957031	2	481.764986	961.515419	-1.555	-0.00074914	4.2959	0.0020696	2.7409	0.0013205	481.7668770966029	52.096	0.71196	52.108	51.639	52.351	0.012436					24	16	2	0	0	0	0.78058	1	4528	4528		30.504	1.3541	1	68409	+	+	57762	16016	38613	38629	65518	65518					0.03312176102747344
TIVPEELL	8	Unmodified	_TIVPEELL_					0	0	0			REV__ENSG00000156414|ENST00000409874|TDRD9	REV__ENSG00000156414|ENST00000409874|TDRD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.261962890625	2	457.265676	912.516799	0.21557	9.8573E-05	-3.1351	-0.0014336	-2.9195	-0.001335	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.91005	1	7861	7861		42.474	0	1	1366100	+		57763	20485	38614	38630	65519	65519					0.057041334631549034
TIVSSNHYG	9	Unmodified	_TIVSSNHYG_					0	0	0		ENST00000431339.1_1_X:73326627-73327404:+|nuORF	ENST00000431339.1_1_X:73326627-73327404:+|nuORF	ENST00000431339.1_1_X:73326627-73327404:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.23681640625	2	489.237981	976.461409	-1.3472	-0.00065908	-1.2202	-0.00059695	-2.5673	-0.001256	489.23722869031667	63.74	1.1993	63.74	63.341	64.54	0					123	57	3	0	0	0	0.7932	1	5619	5619		26.693	2.4902	1	324370			57764	11646	38615	38631	65520	65520					-0.02776280004616183
TIVSSNHYG	9	Unmodified	_TIVSSNHYG_					0	0	0		ENST00000431339.1_1_X:73326627-73327404:+|nuORF	ENST00000431339.1_1_X:73326627-73327404:+|nuORF	ENST00000431339.1_1_X:73326627-73327404:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.2373352050781	2	489.237981	976.461409	-1.3414	-0.00065626	-1.4391	-0.00070408	-2.7805	-0.0013603	489.2373832287043	57.418	2.1604	57.813	57.326	59.487	0.39407					138	52	5	0	0	0	0.41566	2	5977	5965;5977		56.721	8.7615	1	18732000			57765	11646	38615	38631	65521;65522	65522					-0.02776280004616183
TIVSSNHYG	9	Unmodified	_TIVSSNHYG_					0	0	0		ENST00000431339.1_1_X:73326627-73327404:+|nuORF	ENST00000431339.1_1_X:73326627-73327404:+|nuORF	ENST00000431339.1_1_X:73326627-73327404:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	489.237981	976.461409	0.42232	0.00020662	-3.1627	-0.0015473	-2.7404	-0.0013407	489.2365412443781	57.226	2.2772	57.782	57.181	59.458	0.55513	-0.015481	-0.00072273	NaN	56.721	136	55	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16704000			57766	11646	38615	38631							-0.02776280004616183
TIVTVAWNTD	10	Unmodified	_TIVTVAWNTD_					0	0	0			REV__ENSG00000181803|ENST00000320704|OR6S1	REV__ENSG00000181803|ENST00000320704|OR6S1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.2879638671875	2	560.287671	1118.56079	0.42319	0.00023711	-0.33828	-0.00018954	0.084908	4.7573E-05	560.2873712822919	78.48	0.92073	78.426	78.068	78.989	-0.053558					67	24	4	0	0	0	0.86106	1	7856	7856		33.922	3.6039	1	844600	+		57767	22480	38616	38632	65523	65523					0.0062511788946721936
TIVTVSKTIFV	11	Unmodified	_TIVTVSKTIFV_					0	0	0		ENST00000460566.5_1_22:28293057-28315179:-|nuORF	ENST00000460566.5_1_22:28293057-28315179:-|nuORF	ENST00000460566.5_1_22:28293057-28315179:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3662109375	2	604.368464	1206.72238	-0.48563	-0.0002935	-2.8288	-0.0017096	-3.3144	-0.0020031	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.70737	2	11271	11271;11307		30.318	3.6248	1	63350000			57768	12008	38617	38633	65524;65525	65524					0.12728286922538246
TIVVRIVC	8	Unmodified	_TIVVRIVC_					0	0	0		ENST00000556687.5_1_14:23375386-23375479:-|nuORF	ENST00000556687.5_1_14:23375386-23375479:-|nuORF	ENST00000556687.5_1_14:23375386-23375479:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7802734375	2	451.778231	901.541908	0.99248	0.00044838	3.0988	0.0014	4.0913	0.0018484	451.77963856381217	86.78	1.6717	86.706	86.227	87.899	-0.074005					91	38	4	0	0	0	0.87479	1	8929	8929		30.504	0.6621	1	335390			57769	13752	38618	38634	65526	65526					0.08719909784736046
TIWVNILSD	9	Unmodified	_TIWVNILSD_					0	0	0			REV__nc|ENSG00000165186|Q96NR3-2|PTCHD1	REV__nc|ENSG00000165186|Q96NR3-2|PTCHD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.6329956054688	2	530.787307	1059.56006	-0.10516	-5.5819E-05	0.90509	0.00048041	0.79993	0.00042459	531.289746072056	48.366	0.20876	48.273	48.126	48.335	-0.093178					5	4	2	0	0	0	0.20789	1	3666	3666		25.574	0	1	46691	+		57770	21160	38619	38635	65527	65527					0.03266323240427482
TKAAKREH	8	Unmodified	_TKAAKREH_					0	0	0			REV__ENSG00000135569|ENST00000258034|TAAR5	REV__ENSG00000135569|ENST00000258034|TAAR5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.76947021484375	2	470.769783	939.525013	-0.61958	-0.00029168	-0.8581	-0.00040397	-1.4777	-0.00069565	470.76921161929545	80.792	0.73714	81.319	80.992	81.729	0.52677					43	17	3	0	0	0	0.92973	1	9338	9338		50.025	2.1089	1	1161600	+		57771	19234	38620	38636	65528	65528					0.052831252231385406
TKACRQPPIV	10	Carbamidomethyl (C)	_TKAC(Carbamidomethyl (C))RQPPIV_	TKAC(1)RQPPIV		TKAC(64)RQPPIV		0	1	0		ENSG00000196208|ENST00000381486|GREB1;nc|ENSG00000196208|Q4ZG55-4|GREB1	ENSG00000196208|ENST00000381486|GREB1	ENSG00000196208|ENST00000381486|GREB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.32568359375	2	585.326608	1168.63866	-1.6605	-0.00097193	-2.2046	-0.0012904	-3.8651	-0.0022623	585.3254129056655	59.604	0.79423	59.995	59.651	60.445	0.39077					42	19	3	0	0	0	0.3985	1	6315	6315		64.207	16.55	1	541780			57772	8026	38621	38637	65529	65529	95				0.06108852273860066
TKAEIKRHTLA	11	Unmodified	_TKAEIKRHTLA_					0	0	0			REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.377197265625	2	634.377686	1266.74082	1.3188	0.00083664	-1.7871	-0.0011337	-0.46828	-0.00029707	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.69995	1	13020	13020		31.53	0	1	12917000	+		57773	22001	38622	38638	65530	65530					0.11811841617145546
TKAEIKRHTLA	11	Unmodified	_TKAEIKRHTLA_					0	0	0			REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.377685546875	2	634.377686	1266.74082	1.4899	0.00094515	-2.6111	-0.0016564	-1.1213	-0.0007113	634.3759288253121	109.92	1.3103	110.04	109.37	110.68	0.12289					100	52	2	0	0	0	0.68532	1	11793	11793		33.922	6.0394	1	14976000	+		57774	22001	38622	38638	65531	65531					0.11811841617145546
TKAEIKRHTLA	11	Unmodified	_TKAEIKRHTLA_					0	0	0			REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.375732421875	2	634.377686	1266.74082	0.9338	0.00059238	-1.9771	-0.0012542	-1.0433	-0.00066186	634.376227424202	109.98	1.2195	110.05	109.76	110.98	0.073685					116	43	3	0	0	0	0.62614	1	11825	11825		41.427	8.6761	1	11835000	+		57775	22001	38622	38638	65532	65532					0.11811841617145546
TKAFHVRK	8	Unmodified	_TKAFHVRK_					0	0	0		ENSG00000072422|ENST00000337910|RHOBTB1;ENST00000483488.1_1_10:62637742-62648222:-|nuORF	ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7939758300781	2	493.798343	985.582134	-0.18228	-9.0011E-05	-1.3206	-0.0006521	-1.5029	-0.00074212	493.7974799525579	73.971	0.51368	74.53	74.326	74.84	0.55891					24	11	3	0	0	0	0.9283	1	8351	8351		49.442	6.9671	1	468040			57776	1275	38623	38639	65533	65533					0.08876592499518665
TKAGKDKSKAS	11	Unmodified	_TKAGKDKSKAS_					0	0	0		ENSG00000155380|ENST00000369626|SLC16A1;nc|ENSG00000155380|P53985-2|SLC16A1	ENSG00000155380|ENST00000369626|SLC16A1	ENSG00000155380|ENST00000369626|SLC16A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8197021484375	2	560.81967	1119.62479	-1.1548	-0.00064764	1.369	0.00076779	0.21424	0.00012015	560.8203192234314	92.561	2.9962	92.631	91.312	94.308	0.06987					218	70	4	0	0	0	0.43778	1	9625	9625		56.434	24.904	1	775670			57777	5322	38624	38640	65534	65534					0.06975898046425755
TKAGKDKSKAS	11	Unmodified	_TKAGKDKSKAS_					0	0	0		ENSG00000155380|ENST00000369626|SLC16A1;nc|ENSG00000155380|P53985-2|SLC16A1	ENSG00000155380|ENST00000369626|SLC16A1	ENSG00000155380|ENST00000369626|SLC16A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.81982421875	2	560.81967	1119.62479	1.394	0.00078178	-1.1756	-0.00065929	0.21842	0.0001225	560.8189408405052	92.38	3.0704	92.425	91.102	94.172	0.045456					218	72	4	0	0	0	0.69248	1	9699	9699		32.751	3.601	1	723720			57778	5322	38624	38640	65535	65535					0.06975898046425755
TKAGTCASS	9	Unmodified	_TKAGTCASS_					0	0	0		ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1939697265625	2	413.192185	824.369817	0.37594	0.00015534	2.1112	0.00087232	2.4871	0.0010277	413.1933424358141	82.469	1.3874	82.896	82.352	83.74	0.42663					91	33	5	0	0	0	0.76764	1	9524	9524		34.173	0	1	2821200			57779	6237	38625	38641	65536	65536					-0.04939286693456779
TKAGTCASS	9	Unmodified	_TKAGTCASS_					0	0	0		ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	413.192185	824.369817	-0.18742	-7.744E-05	3.4378	0.0014205	3.2504	0.001343	413.1933888692102	82.559	1.8093	82.625	81.613	83.423	0.065918	-0.082618	0.00036781	NaN	34.173	71	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100550			57780	6237	38625	38641							-0.04939286693456779
TKAGTCASS	9	Unmodified	_TKAGTCASS_					0	0	0		ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	413.192185	824.369817	0.46591	0.00019251	2.6271	0.0010855	3.093	0.001278	413.19312720402314	82.691	1.821	82.625	81.637	83.458	-0.066185	-0.08202	-0.00030216	NaN	34.173	71	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94629			57781	6237	38625	38641							-0.04939286693456779
TKAGTCASS	9	Unmodified	_TKAGTCASS_					0	0	0		ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	413.192185	824.369817	2.7212	0.0011244	0.62397	0.00025782	3.3452	0.0013822	413.19230145196025	82.69	1.5122	82.749	81.81	83.322	0.059166	0.04183	-0.0019575	NaN	34.173	56	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112640			57782	6237	38625	38641							-0.04939286693456779
TKAGTCASS	9	Unmodified	_TKAGTCASS_					0	0	0		ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	413.192185	824.369817	-1.8247	-0.00075396	4.9579	0.0020486	3.1332	0.0012946	413.19410467387434	82.372	1.8962	82.527	81.241	83.137	0.15474	-0.18009	0.001624	NaN	34.173	82	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115510			57783	6237	38625	38641							-0.04939286693456779
TKAGTCASS	9	Unmodified	_TKAGTCASS_					0	0	0		ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	413.192185	824.369817	0.56705	0.0002343	2.7499	0.0011363	3.317	0.0013706	413.1931175486247	82.57	1.8137	82.715	81.37	83.184	0.1455	0.0081718	-0.00020063	NaN	34.173	65	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111740			57784	6237	38625	38641							-0.04939286693456779
TKAGTCASS	9	Unmodified	_TKAGTCASS_					0	0	0		ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	413.192185	824.369817	-1.708	-0.00070573	4.9292	0.0020367	3.2213	0.001331	413.1940144167164	82.459	1.6795	82.585	81.45	83.129	0.12601	-0.12209	0.0016003	NaN	34.173	62	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98944			57785	6237	38625	38641							-0.04939286693456779
TKAIKKAI	8	Unmodified	_TKAIKKAI_					0	0	0		ENSG00000113645|ENST00000265293|WWC1;nc|ENSG00000113645|Q8IX03-2|WWC1;ENST00000519659.5_1_5:167833263-167837001:+|nuORF	ENSG00000113645|ENST00000265293|WWC1	ENSG00000113645|ENST00000265293|WWC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7747802734375	2	436.80002	871.585488	0.64596	0.00028216	-0.43992	-0.00019216	0.20604	9E-05	436.79944489763136	90.664	0.2384	90.818	90.639	90.877	0.15388					7	5	2	0	0	0	0.4196	1	9110	9110		16.473	0	1	54415			57786	2736	38626	38642	65537	65537					0.14455842553513776
TKAITFLAAL	10	Unmodified	_TKAITFLAAL_					0	0	0			REV__L1PA7_dup10097|chr11:121781424-121785258:-|1.4322006190095613|0.0265596336256901|5.75|58.0|73|2|sense	REV__L1PA7_dup10097|chr11:121781424-121785258:-|1.4322006190095613|0.0265596336256901|5.75|58.0|73|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.826904296875	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.77314	1	10680	10680		40.778	0	1	30867000	+		57787	29585	38627	38643	65538	65538					0.11092077033845271
TKAKKKKK	8	Unmodified	_TKAKKKKK_					0	0	0			REV__MER4-int_dup2456|chr14:101678431-101679440:-|1.249631700700766|0.067251674876087|4.22|63.0|58|2|anti-sense	REV__MER4-int_dup2456|chr14:101678431-101679440:-|1.249631700700766|0.067251674876087|4.22|63.0|58|2|anti-sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.7588195800781	2	480.339844	958.665135	0.75549	0.00036289	0.56325	0.00027055	1.3187	0.00063344	480.3399622457059	76.266	0.25117	76.665	76.532	76.784	0.39969					9	5	2	0	0	0	0.4196	1	8633	8633		1.2052	0	1	102560	+		57788	29655	38628	38644	65539	65539					0.18414909227510634
TKAKTVGV	8	Unmodified	_TKAKTVGV_					0	0	0			REV__ENSG00000159713|ENST00000393957|TPPP3	REV__ENSG00000159713|ENST00000393957|TPPP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2525939941406	2	402.252903	802.491253	1.9978	0.00080362	-2.4856	-0.00099985	-0.48781	-0.00019622	402.2517370864552	21.102	0.51514	20.643	20.461	20.976	-0.4591					25	11	3	0	0	0	0.88915	2	733	733;759		38.806	5.2906	1	306690	+		57789	20676	38629	38645	65540;65541	65540					0.08210703731390367
TKALIEFLIQH	11	Unmodified	_TKALIEFLIQH_					0	0	0			REV__ENSG00000146205|ENST00000674324|ANO7	REV__ENSG00000146205|ENST00000674324|ANO7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.5914001464844	3	438.258967	1311.75507	-0.33086	-0.000145	-2.5469	-0.0011162	-2.8778	-0.0012612	438.2577888562839	29.898	1.7233	29.855	29.533	31.256	-0.043093					114	42	4	0	0	0	0.76892	1	1687	1687		17.833	0.6664	1	610700	+		57790	19993	38630	38646	65542	65542					0.11166494045414765
TKALPRKS	8	Unmodified	_TKALPRKS_					0	0	0		ENSG00000273899|ENST00000359114|NOL12;ENST00000493862.5_1_22:38077834-38087340:+|nuORF;ENST00000468597.5_1_22:38082399-38086802:+|nuORF	ENSG00000273899|ENST00000359114|NOL12	ENSG00000273899|ENST00000359114|NOL12	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7867736816406	2	450.784902	899.55525	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.82	1	108.77	108.27	109.27	-0.049324								0	0	0	0.29978	1	11864	11864		21.96	2.5999	1				57791	8990	38631	38647	65543	65543					0.10145483888334184
TKAPIRTAN	9	Unmodified	_TKAPIRTAN_					0	0	0			REV__ENST00000570299.5_1_17:44039703-44096001:+|nuORF	REV__ENST00000570299.5_1_17:44039703-44096001:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.2673034667969	2	486.285266	970.555979	0.67418	0.00032784	-2.2309	-0.0010848	-1.5567	-0.00075701	486.2838036843648	88.189	1.1728	88.34	87.469	88.642	0.15055					46	27	2	0	0	0	0.20789	1	8657	8657		60.118	22.307	1	84949	+		57792	22886	38632	38648	65544	65544					0.06952278537380607
TKAPPLDR	8	Unmodified	_TKAPPLDR_					0	0	0			REV__nc|ENSG00000169855|Q9Y6N7-6|ROBO1	REV__nc|ENSG00000169855|Q9Y6N7-6|ROBO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2593688964844	2	449.261259	896.507966	-1.3114	-0.00058915	-0.12706	-5.7085E-05	-1.4384	-0.00064623	449.26102323069586	70.48	0.6918	70.615	70.329	71.021	0.13506					54	33	2	0	0	0	0.82658	1	6388	6388		21.96	1.9631	1	313860	+		57793	21606	38633	38649	65545	65545					0.05557204617332445
TKAPVLPV	8	Unmodified	_TKAPVLPV_					0	0	0		nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7668762207031	2	412.765646	823.516739	-1.2234	-0.00050499	3.8954	0.0016079	2.6719	0.0011029	412.7673243915212	41.944	1.8566	41.905	41.33	43.186	-0.038223					75	44	2	0	0	0	0.84341	2	3214	3214;3273		31.955	2.5004	1	796850			57794	14760	38634	38650	65546;65547	65546					0.0979217825380374
TKAPVLPV	8	Unmodified	_TKAPVLPV_					0	0	0		nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7671813964844	2	412.765646	823.516739	1.0742	0.00044338	1.0077	0.00041595	2.0819	0.00085933	412.7659693172007	40.207	1.4192	40.217	39.687	41.106	0.0092812					79	35	3	0	0	0	0.86288	1	2840	2840		26.796	0	1	573960			57795	14760	38634	38650	65548	65548					0.0979217825380374
TKAPVLPV	8	Unmodified	_TKAPVLPV_					0	0	0		nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2689208984375	2	412.765646	823.516739	1.2445	0.00051368	-1.8023	-0.00074392	-0.55779	-0.00023024	412.76609709283645	41.289	1.0546	41.296	40.74	41.795	0.0065727					35	27	2	0	0	0	0.86288	1	2989	2989		26.796	2.5934	1	169780			57796	14760	38634	38650	65549	65549					0.0979217825380374
TKAPVLPV	8	Unmodified	_TKAPVLPV_					0	0	0		nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.76739501953125	2	412.765646	823.516739	-1.8992	-0.00078392	4.1525	0.001714	2.2533	0.0009301	412.76765198426614	41.794	3.0272	41.798	40.935	43.962	0.0043983					161	84	4	0	0	0	0.87922	1	2855	2855		31.955	5.1588	1	640430			57797	14760	38634	38650	65550	65550					0.0979217825380374
TKAPVLPV	8	Unmodified	_TKAPVLPV_					0	0	0		nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7674865722656	2	412.765646	823.516739	0.20342	8.3963E-05	3.1421	0.001297	3.3455	0.0013809	412.7668349990544	41.738	1.7945	41.811	41.032	42.826	0.073414					111	48	3	0	0	0	0.8347	1	2852	2852		23.042	1.3402	1	669780			57798	14760	38634	38650	65551	65551					0.0979217825380374
TKAPVLPV	8	Unmodified	_TKAPVLPV_					0	0	0		nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76702880859375	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.84341	1	2793	2793		24.203	2.5004	1	818920			57799	14760	38634	38650	65552	65552					0.0979217825380374
TKAPVLPV	8	Unmodified	_TKAPVLPV_					0	0	0		nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7664489746094	2	412.765646	823.516739	-0.33758	-0.00013934	2.1313	0.00087971	1.7937	0.00074037	412.7669144536039	43.714	1.8956	43.657	42.672	44.567	-0.056812					93	46	3	0	0	0	0.84341	1	3000	3000		24.203	2.5004	1	313210			57800	14760	38634	38650	65553	65553					0.0979217825380374
TKAQAKELK	9	Unmodified	_TKAQAKELK_					0	0	0			REV__nc|ENSG00000198758|Q8TE67-2|EPS8L3	REV__nc|ENSG00000198758|Q8TE67-2|EPS8L3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.8075866699219	2	508.808574	1015.60259	-0.95319	-0.00048499	-0.53133	-0.00027035	-1.4845	-0.00075534	508.8082107511822	83.728	2.644	83.728	82.933	85.577	0					147	63	5	0	0	0	0.74721	1	7849	7849		37.159	2.9866	1	4920100	+		57801	23375	38635	38651	65554	65554					0.09541718368654983
TKAQAKELK	9	Unmodified	_TKAQAKELK_					0	0	0			REV__nc|ENSG00000198758|Q8TE67-2|EPS8L3	REV__nc|ENSG00000198758|Q8TE67-2|EPS8L3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.8069152832031	2	508.808574	1015.60259	-0.85493	-0.00043499	-0.55163	-0.00028067	-1.4066	-0.00071567	508.8081854694424	90.498	1.1947	90.498	89.91	91.105	0					75	27	4	0	0	0	0.7932	1	8781	8781		21.96	0	1	968460	+		57802	23375	38635	38651	65555	65555					0.09541718368654983
TKARGKSG	8	Unmodified	_TKARGKSG_					0	0	0		ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.7366027832031	2	402.737951	803.46135	-1.2942	-0.00052123	-0.2479	-9.9837E-05	-1.5421	-0.00062107	402.7378412097274	41.115	1.577	41.074	40.693	42.27	-0.04081					69	41	3	0	0	0	0.79929	1	3060	3060		18.324	0.95945	1	1005100			57803	1261	38636	38652	65556	65556					0.0517576478605406
TKARGKSG	8	Unmodified	_TKARGKSG_					0	0	0		ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.7361145019531	2	402.737951	803.46135	1.2097	0.0004872	-3.0731	-0.0012377	-1.8634	-0.00075046	402.73659624544257	41.046	0.8775	41.052	40.712	41.59	0.0065727					69	23	4	0	0	0	0.81548	1	2997	2997		20.482	2.1574	1	849840			57804	1261	38636	38652	65557	65557					0.0517576478605406
TKARGKSG	8	Unmodified	_TKARGKSG_					0	0	0		ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.73876953125	2	402.737951	803.46135	-0.073434	-2.9575E-05	3.6052	0.0014519	3.5317	0.0014224	402.7394481773092	35.645	1.7843	35.585	35.254	37.038	-0.060333					86	50	3	0	0	0	0.8347	1	1885	1885		23.042	0	1	243330			57805	1261	38636	38652	65558	65558					0.0517576478605406
TKARGKSG	8	Unmodified	_TKARGKSG_					0	0	0		ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.7384948730469	2	402.737951	803.46135	-0.2372	-9.5529E-05	2.937	0.0011828	2.6998	0.0010873	402.73900291247327	40.415	0.69585	40.368	40.046	40.742	-0.04789					69	26	4	0	0	0	0.87479	1	2532	2532		30.504	6.3009	1	593370			57806	1261	38636	38652	65559	65559					0.0517576478605406
TKARGKSG	8	Unmodified	_TKARGKSG_					0	0	0		ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	402.737951	803.46135	-1.8687	-0.00075259	1.1073	0.00044595	-0.76141	-0.00030665	402.73826880736476	40.833	0.76428	40.833	40.595	41.359	0	-0.23029	0.0015793	NaN	18.324	44	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	301870			57807	1261	38636	38652							0.0517576478605406
TKARGKSG	8	Unmodified	_TKARGKSG_					0	0	0		ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	402.737951	803.46135	-1.9007	-0.00076547	1.0529	0.00042405	-0.84775	-0.00034142	402.7383736156187	41.142	0.98076	41.146	40.845	41.826	0.0043983	0.082913	0.0015355	NaN	18.324	46	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	666530			57808	1261	38636	38652							0.0517576478605406
TKARGKSG	8	Unmodified	_TKARGKSG_					0	0	0		ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	402.737951	803.46135	0.19432	7.8262E-05	-0.71199	-0.00028675	-0.51767	-0.00020848	402.7375117455639	40.906	1.0787	40.988	40.678	41.757	0.081345	-0.07558	0.00011388	NaN	18.324	59	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	609200			57809	1261	38636	38652							0.0517576478605406
TKARGKSG	8	Unmodified	_TKARGKSG_					0	0	0		ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	402.737951	803.46135	-0.25855	-0.00010413	-0.25639	-0.00010326	-0.51495	-0.00020739	402.73778457453005	40.985	0.94798	40.94	40.722	41.67	-0.045467	-0.12373	0.00048085	NaN	18.324	57	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	657130			57810	1261	38636	38652							0.0517576478605406
TKARGKSG	8	Unmodified	_TKARGKSG_					0	0	0		ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	ENSG00000071859|ENST00000393600|FAM50A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	402.737951	803.46135	-1.6215	-0.00065305	3.733	0.0015034	2.1115	0.00085038	402.7393410589606	40.536	0.44481	41.125	40.835	41.28	0.58915	0.061913	0.0036942	NaN	18.324	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1598500			57811	1261	38636	38652							0.0517576478605406
TKASDPILLE	10	Unmodified	_TKASDPILLE_					0	0	0			REV__ENSG00000120708|ENST00000442011|TGFBI	REV__ENSG00000120708|ENST00000442011|TGFBI	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.8052368164062	2	543.805697	1085.59684	0.22212	0.00012079	1.1921	0.00064827	1.4142	0.00076906	543.8060783464553	54.313	0.51321	54.287	54.022	54.535	-0.025955					29	14	3	0	0	0	0.8545	1	4906	4906		36.447	4.4919	1	146680	+		57812	18425	38637	38653	65560	65560					0.05746575066359583
TKASSQII	8	Unmodified	_TKASSQII_					0	0	0		ENSG00000129646|ENST00000680821|QRICH2;nc|ENSG00000129646|Q9H0J4-3|QRICH2;ENST00000524722.1_2_17:74270319-74300575:-|nuORF;nc|ENSG00000129646|Q9H0J4|QRICH2	ENSG00000129646|ENST00000680821|QRICH2	ENSG00000129646|ENST00000680821|QRICH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.2504577636719	2	424.247818	846.481082	1.3768	0.0005841	3.5409	0.0015022	4.9177	0.0020863	424.2492891038276	97.642	1.717	98.033	97.562	99.279	0.39065					73	41	3	0	0	0	0.77771	1	11812	11812		64.207	9.431	1	964290			57813	3598	38638	38654	65561	65561					0.05170096006156655
TKATVLRDL	9	Unmodified	_TKATVLRDL_					0	0	0			REV__ENST00000468597.5_1_22:38082399-38086802:+|nuORF	REV__ENST00000468597.5_1_22:38082399-38086802:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.8078308105469	2	508.808574	1015.60259	-0.40009	-0.00020357	-1.3872	-0.00070582	-1.7873	-0.00090939	508.80782145253374	83.116	1.7458	83.281	82.603	84.348	0.1651					72	40	2	0	0	0	0.7932	1	8079	8079		25.574	1.0549	1	4136400	+		57814	23995	38639	38655	65562	65562					0.09541718368643615
TKAYYLTR	8	Unmodified	_TKAYYLTR_					0	0	0			REV__ENSG00000077044|ENST00000264057|DGKD;REV__ENST00000489613.1_1_2:234294779-234297133:+|nuORF	REV__ENSG00000077044|ENST00000264057|DGKD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.2799072265625	2	508.282192	1014.54983	-0.88176	-0.00044818	-2.9285	-0.0014885	-3.8102	-0.0019367	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.90523	1	8684	8684		40.778	3.6191	1	1261800	+		57815	16733;27621	38640	38656	65563	65563					0.043137603058426066
TKDGGMVQRFL	11	Unmodified	_TKDGGMVQRFL_					0	0	0		ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	ENSG00000038532|ENST00000409790|CLEC16A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3263549804688	2	626.329347	1250.64414	-0.15906	-9.9625E-05	-2.5062	-0.0015697	-2.6652	-0.0016693	626.3277543404057	53.246	0.94266	53.242	52.744	53.687	-0.0033035					65	25	3	0	0	0	0.6593	1	4616	4616		28.081	10.613	1	196380			57816	918	38641	38657	65564	65564					0.028845310657061418
TKDGKTIL	8	Unmodified	_TKDGKTIL_					0	0	0		ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2629699707031	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.89494	2	3024	3024;3134		42.396	2.9866	1	5350400			57817	13493	38642	38658	65565;65566	65565					0.07010669040232642
TKDGKTIL	8	Unmodified	_TKDGKTIL_					0	0	0		ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2628479003906	2	438.263468	874.512382	-1.2142	-0.00053214	0.66524	0.00029155	-0.54896	-0.00024059	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.90983	1	3298	3298		42.396	1.8235	1	4828000			57818	13493	38642	38658	65567	65567					0.07010669040232642
TKDGKTIL	8	Unmodified	_TKDGKTIL_					0	0	0		ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2629699707031	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.88601	1	3321	3321		34.173	5.023	1	4268300			57819	13493	38642	38658	65568	65568					0.07010669040232642
TKDGKTIL	8	Unmodified	_TKDGKTIL_					0	0	0		ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26324462890625	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.90089	1	2051	2051		39.253	3.6345	1	11160000			57820	13493	38642	38658	65569	65569					0.07010669040232642
TKDGKTIL	8	Unmodified	_TKDGKTIL_					0	0	0		ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26324462890625	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.93293	1	2535	2535		51.335	3.6781	1	22924000			57821	13493	38642	38658	65570	65570					0.07010669040232642
TKDGKTIL	8	Unmodified	_TKDGKTIL_					0	0	0		ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.26348876953125	2	438.263468	874.512382	0.15263	6.689E-05	-0.38156	-0.00016722	-0.22893	-0.00010033	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.83456	1	1857	1857		60.972	7.6205	1	11370000			57822	13493	38642	38658	65571	65571					0.07010669040232642
TKDGKTIL	8	Unmodified	_TKDGKTIL_					0	0	0		ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2633361816406	2	438.263468	874.512382	0.037237	1.632E-05	-0.30418	-0.00013331	-0.26694	-0.00011699	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.92394	1	2004	2004		47.657	3.5405	1	10667000			57823	13493	38642	38658	65572	65572					0.07010669040232642
TKDGKTIL	8	Unmodified	_TKDGKTIL_					0	0	0		ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	ENST00000540341.1_1_12:8787398-8787947:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26373291015625	2	438.263468	874.512382	0.27759	0.00012166	-1.0434	-0.00045727	-0.76577	-0.00033561	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.82658	2	2773	2653;2773		45.952	1.013	1	85249000			57824	13493	38642	38658	65573;65574	65574					0.07010669040232642
TKDGQMPR	8	Unmodified	_TKDGQMPR_					0	0	0		nc|ENSG00000100239|O75170-2|PPP6R2	nc|ENSG00000100239|O75170-2|PPP6R2	nc|ENSG00000100239|O75170-2|PPP6R2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7344665527344	2	466.734551	931.45455	0.23559	0.00010996	-0.95132	-0.00044401	-0.71573	-0.00033406	466.7340279976939	23.781	0.81942	23.399	23.018	23.837	-0.38178					38	18	4	0	0	0	0.87792	1	1070	1070		31.53	3.6476	1	358980			57825	14811	38643	38659	65575	65575					-0.013919161568423988
TKDKKALA	8	Unmodified	_TKDKKALA_					0	0	0		ENST00000592569.1_1_17:76363287-76364847:+|nuORF	ENST00000592569.1_1_17:76363287-76364847:+|nuORF	ENST00000592569.1_1_17:76363287-76364847:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26287841796875	2	437.77146	873.528367	-0.038394	-1.6808E-05	-1.0045	-0.00043972	-1.0429	-0.00045653	437.770943917186	40.384	1.3697	40.393	39.47	40.84	0.0092773					44	33	2	0	0	0	0.4196	1	2859	2859		5.5578	0.33768	1	67985			57826	14291	38644	38660	65576	65576					0.0865437527713766
TKDKKPLK	8	Unmodified	_TKDKKPLK_					0	0	0		ENST00000390667.9_1_13:73309108-73317683:+|nuORF	ENST00000390667.9_1_13:73309108-73317683:+|nuORF	ENST00000390667.9_1_13:73309108-73317683:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.3079833984375	2	479.30821	956.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.321	1	38.263	37.763	38.763	-0.057915								0	0	0	0.29871	1	2259	2259		23.042	3.6825	1				57827	10997	38645	38661	65577	65577					0.12182923719603878
TKDKRSLAI	9	Unmodified	_TKDKRSLAI_					0	0	0			REV__ENSG00000188419|ENST00000357749|CHM	REV__ENSG00000188419|ENST00000357749|CHM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3124389648438	2	516.314023	1030.61349	0.65847	0.00033998	-0.85995	-0.000444	-0.20148	-0.00010403	516.3134870113196	32.951	1.4307	33.121	32.721	34.151	0.16971					82	33	3	0	0	0	0.7932	1	2349	2349		21.96	0	1	426400	+		57828	23002	38646	38662	65578	65578					0.09941120742928433
TKDLFGNGF	9	Unmodified	_TKDLFGNGF_					0	0	0			REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|10|1|sense	REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|10|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.29931640625	2	499.750724	997.486896	-0.42732	-0.00021355	1.1706	0.000585	0.74327	0.00037145	499.7510910469111	77.876	0.56871	78.282	77.977	78.546	0.40531					39	13	4	0	0	0	0.20789	1	8855	8855		26.693	3.6504	1	811320	+		57829	29519	38647	38663	65579	65579					-0.011948054821800724
TKDPALKLC	9	Unmodified	_TKDPALKLC_					0	0	0		nc|ENSG00000179832|Q8NDA8-2|MROH1;ENST00000532255.5_1_8:145218705-145305309:+|nuORF;ENSG00000179832|ENST00000326134|MROH1;ENST00000544576.1_1_8:145297127-145303835:+|nuORF	nc|ENSG00000179832|Q8NDA8-2|MROH1	nc|ENSG00000179832|Q8NDA8-2|MROH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7799987792969	2	494.778428	987.542302	-0.074951	-3.7084E-05	4.0919	0.0020246	4.017	0.0019875	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.78058	1	8857	8857		30.504	1.3336	1	651380			57830	7295	38648	38664	65580	65580					0.04803284713909761
TKDQPAAR	8	Unmodified	_TKDQPAAR_					0	0	0			REV__nc|ENSG00000165138|Q68DC2-4|ANKS6	REV__nc|ENSG00000165138|Q68DC2-4|ANKS6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.74481201171875	2	443.740691	885.466829	-1.071	-0.00047526	2.4453	0.0010851	1.3743	0.00060982	443.74129422980394	88.783	0.35861	89.254	88.955	89.314	0.47068					13	8	2	0	0	0	0.4196	1	10487	10487		19.104	0	1	135410	+		57831	21153	38649	38665	65581	65581					0.019514435778546613
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2633056640625	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.88601	1	2091	2091		34.173	2.6427	1	3507500	+		57832	18383	38650	38666	65582	65582					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26312255859375	2	438.263468	874.512382	-1.8646	-0.00081717	1.0768	0.00047194	-0.78773	-0.00034523	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.88601	1	2773	2773		34.173	0.65696	1	3384400	+		57833	18383	38650	38666	65583	65583					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2601623535156	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.87071	2	3003	3003;3098		42.396	6.1276	1	5350400	+		57834	18383	38650	38666	65584;65585	65584					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.263427734375	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.93293	1	2626	2626		51.335	8.9393	1	2862500	+		57835	18383	38650	38666	65586	65586					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2632141113281	2	438.263468	874.512382	-1.2142	-0.00053214	0.66524	0.00029155	-0.54896	-0.00024059	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.90983	1	3158	3158		42.396	5.237	1	4828000	+		57836	18383	38650	38666	65587	65587					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26324462890625	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.87064	2	2597	2549;2597		34.173	2.3535	1	2361100	+		57837	18383	38650	38666	65588;65589	65589					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2631530761719	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.8621	4	3226	3095;3107;3132;3226		42.396	2.0937	1	4268300	+		57838	18383	38650	38666	65590;65591;65592;65593	65593					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2634582519531	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.88601	2	2020	2020;2043		34.173	3.6689	1	11160000	+		57839	18383	38650	38666	65594;65595	65594					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26287841796875	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.89494	4	2706	2559;2588;2633;2706		42.396	3.6345	1	22924000	+		57840	18383	38650	38666	65596;65597;65598;65599	65599					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2633972167969	2	438.263468	874.512382	0.15263	6.689E-05	-0.38156	-0.00016722	-0.22893	-0.00010033	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.87064	4	1848	1848;1961;1989;2005		47.657	8.4045	1	11370000	+		57841	18383	38650	38666	65600;65601;65602;65603	65600					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2629699707031	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.88601	3	2548	2548;2632;2691		51.335	14.176	1	22029000	+		57842	18383	38650	38666	65604;65605;65606	65604					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2633972167969	2	438.263468	874.512382	0.037237	1.632E-05	-0.30418	-0.00013331	-0.26694	-0.00011699	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.88601	2	1877	1877;1984		39.253	2.0937	1	10667000	+		57843	18383	38650	38666	65607;65608	65607					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2631530761719	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.84341	2	2672	2672;2727		34.173	1.3601	1	21381000	+		57844	18383	38650	38666	65609;65610	65609					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2613830566406	2	438.263468	874.512382	0.27759	0.00012166	-1.0434	-0.00045727	-0.76577	-0.00033561	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.89494	1	2871	2871		37.159	8.0096	1	85249000	+		57845	18383	38650	38666	65611	65611					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26409912109375	2	438.263468	874.512382	-2.4769	-0.0010856	0.22797	9.991E-05	-2.249	-0.00098564	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.88601	4	3625	3577;3625;3673;3709		51.335	6.9583	1	246320000	+		57846	18383	38650	38666	65612;65613;65614;65615	65613					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2635498046875	2	438.263468	874.512382	1.5783	0.00069171	-2.4144	-0.0010581	-0.83609	-0.00036643	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.87064	2	2641	2617;2641		42.396	3.1433	1	92475000	+		57847	18383	38650	38666	65616;65617	65617					0.07010669040244011
TKDTLKIG	8	Unmodified	_TKDTLKIG_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.26177978515625	2	438.263468	874.512382	-1.2747	-0.00055866	-0.66852	-0.00029299	-1.9432	-0.00085165	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.88601	3	3613	3517;3541;3613		42.396	1.618	1	219150000	+		57848	18383	38650	38666	65618;65619;65620	65620					0.07010669040244011
TKECVTAFL	9	Unmodified	_TKECVTAFL_					0	0	0			REV__ENSG00000198722|ENST00000635942|UNC13B	REV__ENSG00000198722|ENST00000635942|UNC13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.810302734375	2	506.26261	1010.51067	0.77495	0.00039233	-4.138	-0.0020949	-3.3631	-0.0017026	506.2603842249167	66.113	0.95368	66.665	66.268	67.222	0.5526					69	26	4	0	0	0	0.76764	1	7287	7287		34.173	0.25091	1	1255300	+		57849	23365	38651	38667	65621	65621					0.005832919599697561
TKECVTAFL	9	Unmodified	_TKECVTAFL_					0	0	0			REV__ENSG00000198722|ENST00000635942|UNC13B	REV__ENSG00000198722|ENST00000635942|UNC13B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	506.26261	1010.51067	0.17388	8.8031E-05	-3.5822	-0.0018135	-3.4083	-0.0017255	506.2606737316775	66.258	0.91971	66.643	66.316	67.236	0.38582	-0.010989	0.00034018	NaN	34.173	57	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1245800	+		57850	23365	38651	38667							0.005832919599697561
TKECVTAFL	9	Unmodified	_TKECVTAFL_					0	0	0			REV__ENSG00000198722|ENST00000635942|UNC13B	REV__ENSG00000198722|ENST00000635942|UNC13B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	506.26261	1010.51067	0.77495	0.00039233	-4.138	-0.0020949	-3.3631	-0.0017026	506.2603842249167	66.113	0.95368	66.665	66.268	67.222	0.5526	0.010989	-0.00022263	NaN	34.173	69	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1255300	+		57851	23365	38651	38667							0.005832919599697561
TKEIMQKHQ	9	Unmodified	_TKEIMQKHQ_					0	0	0		ENST00000215730.11_1_22:21243243-21243435:+|nuORF	ENST00000215730.11_1_22:21243243-21243435:+|nuORF	ENST00000215730.11_1_22:21243243-21243435:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	571.7769165039062	2	571.802965	1141.59138	-0.05253	-3.0037E-05	1.5884	0.00090825	1.5359	0.00087821	572.3048145036007	54.079	0.24825	54.663	54.501	54.749	0.58474					8	5	2	0	0	0	0.20789	1	5488	5488		14.865	0	1	100620			57852	9116	38652	38668	65622	65622					0.026245730028676917
TKEKGRLLDKR	11	Unmodified	_TKEKGRLLDKR_					0	0	0			REV__ENST00000604081.1_1_12:54388028-54388532:-|nuORF	REV__ENST00000604081.1_1_12:54388028-54388532:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	448.6087951660156	3	448.60877	1342.80448	0.6314	0.00028325	0.36355	0.00016309	0.99495	0.00044634	448.60887470875934	77.01	0.99304	77.058	76.682	77.675	0.047981					82	45	2	0	0	0	0.77205	1	7538	7538		17.167	0.63689	1	702210	+		57853	29352	38653	38669	65623	65623					0.14679202054207963
TKEKKALQEAH	11	Unmodified	_TKEKKALQEAH_					0	0	0		ENSG00000264424|ENST00000255381|MYH4;ENSG00000125414|ENST00000245503|MYH2;ENSG00000109061|ENST00000226207|MYH1;ENSG00000197616|ENST00000405093|MYH6;ENSG00000092054|ENST00000355349|MYH7;ENSG00000078814|ENST00000262873|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B	ENSG00000264424|ENST00000255381|MYH4;ENSG00000125414|ENST00000245503|MYH2;ENSG00000109061|ENST00000226207|MYH1;ENSG00000197616|ENST00000405093|MYH6;ENSG00000078814|ENST00000262873|MYH7B	ENSG00000264424|ENST00000255381|MYH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3624267578125	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.50531	2	12505	12456;12505		51.528	10.75	1	27133000			57854	8943;2445;8183;1407;3389	38654	38670	65624;65625	65625					0.07451545000571969
TKEKTVKFSF	10	Unmodified	_TKEKTVKFSF_					0	0	0			REV__ENST00000232905.3_1_3:40352994-40353473:+|nuORF	REV__ENST00000232905.3_1_3:40352994-40353473:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5641174316406	3	405.564168	1213.67067	0.36519	0.00014811	1.0895	0.00044187	1.4547	0.00058997	405.56448085156467	59.925	1.6913	60.042	59.092	60.783	0.11676					133	55	3	0	0	0	0.86698	1	5256	5256		33.039	17.119	1	327870	+		57855	24201	38655	38671	65626	65626					0.07238543228640992
TKELPFKF	8	Unmodified	_TKELPFKF_					0	0	0			REV__ENST00000254691.9_2_5:40853406-40853502:+|nuORF	REV__ENST00000254691.9_2_5:40853406-40853502:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.2912902832031	2	505.289485	1008.56442	2.3779	0.0012015	1.554	0.00078521	3.9319	0.0019867	505.29016362201537	97.35	2.1515	97.295	96.802	98.953	-0.055542					137	49	4	0	0	0	0.8347	1	10469	10469		23.042	2.5607	1	1240400	+		57856	24310	38656	38672	65627	65627					0.060478324539985806
TKELTAVP	8	Unmodified	_TKELTAVP_					0	0	0			REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.7493896484375	2	429.750193	857.485833	-1.7334	-0.00074493	0.77902	0.00033479	-0.95437	-0.00041014	429.7503701051042	40.361	2.4974	40.367	40.029	42.526	0.0065002					186	77	3	0	0	0	0.60357	1	2564	2564		71.296	7.9894	1	3826800	+		57857	29060	38657	38673	65628	65628					0.05138980148910832
TKELTAVP	8	Unmodified	_TKELTAVP_					0	0	0			REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.75006103515625	2	429.750193	857.485833	0.19062	8.192E-05	-1.2633	-0.00054292	-1.0727	-0.000461	429.7494836550346	40.163	2.386	40.244	39.962	42.348	0.081345					177	71	3	0	0	0	0.90465	1	2522	2522		40.573	0	1	3979000	+		57858	29060	38657	38673	65629	65629					0.05138980148910832
TKELTAVP	8	Unmodified	_TKELTAVP_					0	0	0			REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.7505187988281	2	429.750193	857.485833	-0.15763	-6.7743E-05	-0.95449	-0.00041019	-1.1121	-0.00047794	429.7496181624476	40.277	2.7409	40.229	39.975	42.716	-0.04789					188	88	4	0	0	0	0.60357	1	2534	2534		71.296	12.514	1	4300300	+		57859	29060	38657	38673	65630	65630					0.05138980148910832
TKELTAVP	8	Unmodified	_TKELTAVP_					0	0	0			REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7506103515625	2	429.750193	857.485833	0.60427	0.00025969	0.37111	0.00015949	0.97539	0.00041917	429.75036736011566	34.927	1.9228	35.138	34.854	36.777	0.21003					152	48	4	0	0	0	0.91982	1	2672	2672		45.972	1.8554	1	5113100	+		57860	29060	38657	38673	65631	65631					0.05138980148910832
TKELTAVP	8	Unmodified	_TKELTAVP_					0	0	0			REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.749755859375	2	429.750193	857.485833	-1.2651	-0.00054369	0.44911	0.000193	-0.81601	-0.00035068	429.7502304021701	40.953	2.5169	41.587	40.841	43.358	0.6339					165	67	3	0	0	0	0.89494	1	3555	3555		37.159	0	1	8697100	+		57861	29060	38657	38673	65632	65632					0.05138980148910832
TKELTAVP	8	Unmodified	_TKELTAVP_					0	0	0			REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	REV__ENST00000582301.5_1_9:22063975-22077773:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	429.750193	857.485833	-1.5131	-0.00065025	0.97693	0.00041984	-0.53617	-0.00023042	429.7505062763499	40.004	0.39782	40.372	40.151	40.549	0.36797	0.069097	0.0012823	NaN	71.296	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133130	+		57862	29060	38657	38673							0.05138980148910832
TKEPFLLV	8	Unmodified	_TKEPFLLV_					0	0	0		ENSG00000184602|ENST00000329565|SNN	ENSG00000184602|ENST00000329565|SNN	ENSG00000184602|ENST00000329565|SNN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.7807922363281	2	473.784036	945.553519	-0.30014	-0.0001422	-2.0846	-0.00098766	-2.3848	-0.0011299	473.7828602657225	21.786	0.75253	21.722	21.433	22.185	-0.063837					49	24	3	0	0	0	0.86677	1	645	645		27.882	1.0861	1	95857			57863	7628	38658	38674	65633	65633					0.07856430079721122
TKEPKTDSTM	10	Unmodified	_TKEPKTDSTM_					0	0	0			REV__ENST00000518738.1_1_8:104075244-104075403:+|nuORF	REV__ENST00000518738.1_1_8:104075244-104075403:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.2735595703125	2	569.276446	1136.53834	0.087818	4.9993E-05	-3.0788	-0.0017527	-2.991	-0.0017027	569.2748918434346	58.626	0.62676	58.595	58.209	58.836	-0.030888					43	19	3	0	0	0	0.78666	1	5443	5443		40.058	7.3076	1	198820	+		57864	28066	38659	38675	65634	65634					-0.02446849570469567
TKEQSHGA	8	Unmodified	_TKEQSHGA_					0	0	0			REV__ENSG00000089199|ENST00000378961|CHGB	REV__ENSG00000089199|ENST00000378961|CHGB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	429.23565673828125	2	429.209224	856.403895	-0.179	-7.6831E-05	3.9977	0.0017159	3.8187	0.001639	429.20968601045723	63.43	0.09341	63.424	63.387	63.481	-0.0055504					6	4	2	0	0	0	0.4196	1	5902	5902		18.324	6.8134	1	22940	+		57865	16966	38660	38676	65635	65635					-0.03005122210186073
TKERVTMTKVT	11	Unmodified	_TKERVTMTKVT_					0	0	0		ENSG00000112079|ENST00000229812|STK38	ENSG00000112079|ENST00000229812|STK38	ENSG00000112079|ENST00000229812|STK38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	647.3605346679688	2	647.363387	1292.71222	-0.0023384	-1.5138E-06	-2.1095	-0.0013656	-2.1118	-0.0013671	647.3613951778331	117.6	0.26853	117.53	117.36	117.63	-0.07531					18	8	3	0	0	0	0.73621	1	12615	12615		25.126	6.0225	1	96794			57866	2631	38661	38677	65636	65636					0.07757355925673437
TKERVTMTKVT	11	Unmodified	_TKERVTMTKVT_					0	0	0		ENSG00000112079|ENST00000229812|STK38	ENSG00000112079|ENST00000229812|STK38	ENSG00000112079|ENST00000229812|STK38	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	647.363387	1292.71222	2.647	0.0017136	-4.4444	-0.0028772	-1.7975	-0.0011636	647.8622623069762	117.55	0.40236	117.52	117.31	117.71	-0.024338	-0.003299	-0.0017108	NaN	25.126	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44499			57867	2631	38661	38677							0.07757355925673437
TKETAKTIHLG	11	Unmodified	_TKETAKTIHLG_					0	0	0			REV__ENST00000355202.8_1_19:38210295-38210535:-|nuORF	REV__ENST00000355202.8_1_19:38210295-38210535:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2293701171875	3	400.231189	1197.67174	-0.34643	-0.00013865	-1.8381	-0.00073567	-2.1845	-0.00087432	400.2304278989063	42.279	0.60004	42.693	42.427	43.027	0.4139					28	14	3	0	0	0	0.71207	1	3772	3772		29.551	1.9068	1	989290	+		57868	25370	38662	38678	65637	65637					0.08080757597554111
TKFAELTKINL	11	Unmodified	_TKFAELTKINL_					0	0	0		ENSG00000198707|ENST00000552810|CEP290	ENSG00000198707|ENST00000552810|CEP290	ENSG00000198707|ENST00000552810|CEP290	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2527770996094	3	426.586972	1276.73909	0.738	0.00031482	-2.9976	-0.0012787	-2.2596	-0.0009639	426.5856921633116	17.738	0.45243	17.255	17.153	17.606	-0.48256					17	9	3	0	0	0	0.17301	1	286	286		23.514	0	1	244650			57869	8310	38663	38679	65638	65638					0.11178787808512425
TKFFLVVF	8	Unmodified	_TKFFLVVF_					0	0	0			REV__ENSG00000113811|ENST00000495461|SELENOK	REV__ENSG00000113811|ENST00000495461|SELENOK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.79962158203125	2	500.796946	999.57934	-1.6124	-0.00080748	3.1095	0.0015572	1.4971	0.00074975	500.79842715504543	94.334	1.559	94.532	94.244	95.803	0.19827					54	37	2	0	0	0	0.89962	1	9606	9606		38.806	5.9937	1	438210	+		57870	18017	38664	38680	65639	65639					0.07953324321999844
TKFMDVECSVN	11	Unmodified	_TKFMDVECSVN_					0	0	0			REV__ENSG00000138035|ENST00000447944|PNPT1;REV__ENST00000260604.8_1_2:55870335-55906871:-|nuORF	REV__ENSG00000138035|ENST00000447944|PNPT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	636.78369140625	2	636.783581	1271.55261	0.51323	0.00032682	0.10038	6.3923E-05	0.61362	0.00039074	636.7833925074113	53.871	0.60281	53.953	53.652	54.255	0.081524					32	14	3	0	0	0	0.7434	1	4433	4433		23.523	0	1	364980	+		57871	19431;24369	38665	38681	65640	65640					-0.07230520413827435
TKFSYLLQKS	10	Unmodified	_TKFSYLLQKS_					0	0	0			REV__nc|ENSG00000106701|Q9BXM9-2|FSD1L	REV__nc|ENSG00000106701|Q9BXM9-2|FSD1L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5647888183594	3	405.564168	1213.67067	-1.5858	-0.00064316	2.9135	0.0011816	1.3277	0.00053847	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.86272	1	5289	5289		17.833	0	1	181560	+		57872	17626	38666	38682	65641	65641					0.0723854322866373
TKFVDNTQNW	10	Unmodified	_TKFVDNTQNW_					0	0	0			REV__ENST00000511525.1_1_5:43446333-43446519:-|nuORF	REV__ENST00000511525.1_1_5:43446333-43446519:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3798217773438	2	626.801477	1251.5884	-0.22673	-0.00014211	0.13665	8.5653E-05	-0.090076	-5.646E-05	626.8035713769629	107.2	0.12987	107.16	107.08	107.21	-0.034409					4	2	2	0	0	0	0.37624	1	11655	11655		26.693	5.0072	1	25765	+		57873	27972	38667	38683	65642	65642					-0.027329788502811425
TKFVKAIVNS	10	Unmodified	_TKFVKAIVNS_					0	0	0		ENSG00000163440|ENST00000295645|PDCL2	ENSG00000163440|ENST00000295645|PDCL2	ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8307495117188	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.86802	1	8416	8416		27.047	5.0874	1	1181400			57874	5798	38668	38684	65643	65643					0.10094577919812764
TKGALLHV	8	Unmodified	_TKGALLHV_					0	0	0			REV__ENST00000515455.2_1_16:30108011-30108224:+|nuORF	REV__ENST00000515455.2_1_16:30108011-30108224:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.77471923828125	2	419.760895	837.507237	-1.488	-0.00062461	3.8321	0.0016086	2.3441	0.00098395	419.7623664004274	41.299	0.52839	41.933	41.569	42.097	0.6339					18	14	2	0	0	0	0.4196	1	3560	3560		33.516	0	1	1649500	+		57875	28032	38669	38685	65644	65644					0.08198409968269971
TKGAVTGSV	9	Unmodified	_TKGAVTGSV_					0	0	0		ENSG00000147872|ENST00000276914|PLIN2	ENSG00000147872|ENST00000276914|PLIN2	ENSG00000147872|ENST00000276914|PLIN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.29266357421875	2	410.232168	818.449782	1.5601	0.00064002	-1.3781	-0.00056533	0.18205	7.4681E-05	410.2316404356065	22.819	0.59389	22.4	22.016	22.61	-0.41879					19	13	2	0	0	0	0.20789	1	969	969		14.137	1.9303	1	73085			57876	4925	38670	38686	65645	65645					0.0332952297205793
TKGFFGKF	8	Unmodified	_TKGFFGKF_					0	0	0			REV__ENSG00000133961|ENST00000555238|NUMB	REV__ENSG00000133961|ENST00000555238|NUMB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2525939941406	2	466.255446	930.496338	-1.0712	-0.00049944	-2.4245	-0.0011304	-3.4957	-0.0016299	466.2541904327881	60.586	1.2512	60.686	59.935	61.186	0.10082					87	49	2	0	0	0	0.89962	1	5218	5218		38.806	6.8513	1	202870	+		57877	19105	38671	38687	65646	65646					0.02831007593999857
TKGFIARLTGP	11	Unmodified	_TKGFIARLTGP_					0	0	0			REV__nc|ENSG00000143156|Q9Y5B8-2|NME7	REV__nc|ENSG00000143156|Q9Y5B8-2|NME7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.8402099609375	2	580.842948	1159.67134	-0.88113	-0.0005118	-3.3252	-0.0019314	-4.2063	-0.0024432	580.8408357600173	69.895	0.91608	69.925	69.626	70.542	0.030502					112	46	3	0	0	0	0.60687	1	6616	6616		43.651	7.204	1	15247000	+		57878	19775	38672	38688	65647	65647					0.09789382668373037
TKGGTHIR	8	Unmodified	_TKGGTHIR_					0	0	0			REV__ENSG00000269067|ENST00000594710|ZNF728	REV__ENSG00000269067|ENST00000594710|ZNF728	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25152587890625	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.87064	1	7215	7215		29.15	0	1	2494100	+		57879	23973	38673	38689	65648	65648					0.04839453677379879
TKGIKTEGLY	10	Unmodified	_TKGIKTEGLY_					0	0	0		ENSG00000079482|ENST00000355520|OPHN1;ENST00000467444.1_1_X:67412641-67430091:-|nuORF	ENSG00000079482|ENST00000355520|OPHN1	ENSG00000079482|ENST00000355520|OPHN1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.7648315429688	2	555.313689	1108.61282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.934	1	73.065	72.565	73.565	0.13064								0	0	0	0.45132	1	6710	6710		28.081	5.039	1				57880	1423	38674	38690	65649	65649					0.06286281303255237
TKGIPIET	8	Unmodified	_TKGIPIET_					0	0	0		ENST00000495718.5_1_1:59762794-59812023:+|nuORF	ENST00000495718.5_1_1:59762794-59812023:+|nuORF	ENST00000495718.5_1_1:59762794-59812023:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.75	2	429.750193	857.485833	-1.7334	-0.00074493	0.77902	0.00033479	-0.95437	-0.00041014	429.7503701051042	40.361	2.4974	40.367	40.029	42.526	0.0065002					186	77	3	0	0	0	0.91472	1	2554	2554		44.117	5.3107	1	3826800			57881	12773	38675	38691	65650	65650					0.05138980148910832
TKGIPIET	8	Unmodified	_TKGIPIET_					0	0	0		ENST00000495718.5_1_1:59762794-59812023:+|nuORF	ENST00000495718.5_1_1:59762794-59812023:+|nuORF	ENST00000495718.5_1_1:59762794-59812023:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.7490539550781	2	429.750193	857.485833	-0.15763	-6.7743E-05	-0.95449	-0.00041019	-1.1121	-0.00047794	429.7496181624476	40.277	2.7409	40.229	39.975	42.716	-0.04789					188	88	4	0	0	0	0.90983	1	2544	2544		42.396	1.618	1	4300300			57882	12773	38675	38691	65651	65651					0.05138980148910832
TKGIPIET	8	Unmodified	_TKGIPIET_					0	0	0		ENST00000495718.5_1_1:59762794-59812023:+|nuORF	ENST00000495718.5_1_1:59762794-59812023:+|nuORF	ENST00000495718.5_1_1:59762794-59812023:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7506103515625	2	429.750193	857.485833	0.60427	0.00025969	0.37111	0.00015949	0.97539	0.00041917	429.75036736011566	34.927	1.9228	35.138	34.854	36.777	0.21003					152	48	4	0	0	0	0.89494	1	2659	2659		37.159	2.9866	1	5113100			57883	12773	38675	38691	65652	65652					0.05138980148910832
TKGIPIET	8	Unmodified	_TKGIPIET_					0	0	0		ENST00000495718.5_1_1:59762794-59812023:+|nuORF	ENST00000495718.5_1_1:59762794-59812023:+|nuORF	ENST00000495718.5_1_1:59762794-59812023:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.750244140625	2	429.750193	857.485833	-2.154	-0.00092569	1.0157	0.0004365	-1.1383	-0.00048919	429.75051038702645	40.625	2.1327	41.017	40.832	42.965	0.39209					111	57	2	0	0	0	0.90983	1	3596	3596		42.396	3.59	1	10174000			57884	12773	38675	38691	65653	65653					0.05138980148910832
TKGKGLILTKH	11	Unmodified	_TKGKGLILTKH_					0	0	0			REV__ENSG00000121578|ENST00000393765|B4GALT4	REV__ENSG00000121578|ENST00000393765|B4GALT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3819580078125	2	598.379697	1194.74484	-0.19423	-0.00011622	3.3027	0.0019763	3.1085	0.00186	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.70737	1	2946	2946		30.318	2.2362	1	825320	+		57885	18460	38676	38692	65654	65654					0.15525931110823876
TKGKGLILTKH	11	Unmodified	_TKGKGLILTKH_					0	0	0			REV__ENSG00000121578|ENST00000393765|B4GALT4	REV__ENSG00000121578|ENST00000393765|B4GALT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.3800048828125	2	598.379697	1194.74484	-0.74115	-0.00044349	3.5243	0.0021089	2.7832	0.0016654	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.67778	1	3062	3062		35.152	3.6222	1	772980	+		57886	18460	38676	38692	65655	65655					0.15525931110823876
TKGKKSHQ	8	Unmodified	_TKGKKSHQ_					0	0	0			REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33	REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2637939453125	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.87422	1	7880	7880		30.318	1.1682	1	2957200	+		57887	23220	38677	38693	65656	65656					0.05435722848858404
TKGKKSHQ	8	Unmodified	_TKGKKSHQ_					0	0	0			REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33	REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.26318359375	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.8537	1	7786	7786		25.574	0.12388	1	1458600	+		57888	23220	38677	38693	65657	65657					0.05435722848858404
TKGKKSHQ	8	Unmodified	_TKGKKSHQ_					0	0	0			REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33	REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.26220703125	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.82658	1	8285	8285		21.96	1.013	1	4597500	+		57889	23220	38677	38693	65658	65658					0.05435722848858404
TKGKLSSYKKR	11	Unmodified	_TKGKLSSYKKR_					0	0	0			REV__chrX:104062137-104074241|25|11.16|0.32|5.1|-|1|H2BW3P,TMSB15C|2	REV__chrX:104062137-104074241|25|11.16|0.32|5.1|-|1|H2BW3P,TMSB15C|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3916015625	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75544	1	12664	12664		20.837	2.5751	1	2297700	+		57890	15943	38678	38694	65659	65659					0.13652414651210165
TKGKNLVI	8	Unmodified	_TKGKNLVI_					0	0	0			REV__nc|ENSG00000169432|Q15858-4|SCN9A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2655334472656	2	436.781828	871.549102	2.7261	0.0011907	-2.971	-0.0012977	-0.24488	-0.00010696	436.7808995141121	25.978	0.43079	25.547	25.396	25.827	-0.4311					13	9	2	0	0	0	0.4196	1	1380	1380		14.865	3.3539	1	38351	+		57891	15736	38679	38695	65660	65660					0.10818965656790169
TKGLANLH	8	Unmodified	_TKGLANLH_					0	0	0			REV__ENSG00000142207|ENST00000382751|URB1	REV__ENSG00000142207|ENST00000382751|URB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3027648925781	2	427.248152	852.481751	0.35843	0.00015314	-3.0992	-0.0013241	-2.7408	-0.001171	427.24657273832446	69.249	0.42316	69.633	69.266	69.689	0.38416					12	9	2	0	0	0	0.4196	1	7637	7637		44.117	0	1	67551	+		57892	19730	38680	38696	65661	65661					0.049609354458425514
TKGLAVKH	8	Unmodified	_TKGLAVKH_					0	0	0			REV__ENSG00000167601|ENST00000301178|AXL	REV__ENSG00000167601|ENST00000301178|AXL	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3027648925781	2	427.266345	852.518136	-0.18404	-7.8633E-05	0.090127	3.8508E-05	-0.093911	-4.0125E-05	427.26644492160636	64.317	0.81282	64.704	64.221	65.034	0.38681					21	18	2	0	0	0	0.4196	1	6985	6985		45.952	12.436	1	49384	+		57893	21401	38681	38697	65662	65662					0.08597812342566158
TKGLPTSL	8	Unmodified	_TKGLPTSL_					0	0	0			REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.29266357421875	2	408.744911	815.475269	1.6303	0.00066637	-1.0662	-0.00043581	0.56406	0.00023056	408.7443871021681	22.515	1.0172	22.096	21.833	22.85	-0.41879					41	23	2	0	0	0	0.4196	1	969	969		20.947	0	1	71477	+		57894	16226	38682	38698	65663	65663					0.060149974944692985
TKGLQVVK	8	Unmodified	_TKGLQVVK_					0	0	0			REV__ENST00000528637.5_1_11:16892694-16902972:-|nuORF	REV__ENST00000528637.5_1_11:16892694-16902972:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26751708984375	2	436.781828	871.549102	-1.5803	-0.00069025	-0.8014	-0.00035004	-2.3817	-0.0010403	436.7818164233155	54.061	0.70729	54.116	53.724	54.431	0.055614					32	21	2	0	0	0	0.4196	1	4433	4433		15.642	0	1	122850	+		57895	28248	38683	38699	65664	65664					0.10818965656801538
TKGNKARV	8	Unmodified	_TKGNKARV_					0	0	0			REV__ENST00000503467.1_1_4:17587853-17609209:+|nuORF	REV__ENST00000503467.1_1_4:17587853-17609209:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2650451660156	2	437.266876	872.519199	0.61137	0.00026733	-3.2	-0.0013992	-2.5886	-0.0011319	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.80959	1	818	818		15.642	0	1	1313200	+		57896	16045	38684	38700	65665	65665					0.0778402671146523
TKGNKARV	8	Unmodified	_TKGNKARV_					0	0	0			REV__ENST00000503467.1_1_4:17587853-17609209:+|nuORF	REV__ENST00000503467.1_1_4:17587853-17609209:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26470947265625	2	437.266876	872.519199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.35	1	23.411	22.911	23.911	0.060431								0	0	0	0.29871	1	769	769		23.042	2.0956	1		+		57897	16045	38684	38700	65666	65666					0.0778402671146523
TKGNKARV	8	Unmodified	_TKGNKARV_					0	0	0			REV__ENST00000503467.1_1_4:17587853-17609209:+|nuORF	REV__ENST00000503467.1_1_4:17587853-17609209:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2651062011719	2	437.266876	872.519199	-0.37471	-0.00016385	-2.2126	-0.0009675	-2.5873	-0.0011313	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.84341	1	867	867		24.203	1.1603	1	970200	+		57898	16045	38684	38700	65667	65667					0.0778402671146523
TKGNKARV	8	Unmodified	_TKGNKARV_					0	0	0			REV__ENST00000503467.1_1_4:17587853-17609209:+|nuORF	REV__ENST00000503467.1_1_4:17587853-17609209:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2655944824219	2	437.266876	872.519199	-0.36504	-0.00015962	-2.3712	-0.0010368	-2.7362	-0.0011965	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.89043	1	1004	1004		35.618	0	1	1300600	+		57899	16045	38684	38700	65668	65668					0.0778402671146523
TKGNKARV	8	Unmodified	_TKGNKARV_					0	0	0			REV__ENST00000503467.1_1_4:17587853-17609209:+|nuORF	REV__ENST00000503467.1_1_4:17587853-17609209:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26422119140625	2	437.266876	872.519199	1.7622	0.00077054	-4.3406	-0.001898	-2.5785	-0.0011275	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.82658	1	866	866		21.96	2.5999	1	1079000	+		57900	16045	38684	38700	65669	65669					0.0778402671146523
TKGNRRAA	8	Unmodified	_TKGNRRAA_					0	0	0			REV__ENST00000469590.5_1_1:219385024-219385093:+|nuORF	REV__ENST00000469590.5_1_1:219385024-219385093:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26629638671875	2	437.2543	872.494047	-1.6045	-0.0007016	3.7091	0.0016218	2.1045	0.0009202	437.2559516474733	35.244	0.21919	35.282	35.192	35.411	0.038643					12	7	2	0	0	0	0.87479	1	1836	1836		30.504	0.6621	1	26175	+		57901	27197	38685	38701	65670	65670					0.05269971908887783
TKGQEIVHVF	10	Unmodified	_TKGQEIVHVF_					0	0	0			REV__ENST00000454229.1_1_2:6636110-6636479:-|nuORF	REV__ENST00000454229.1_1_2:6636110-6636479:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.8441162109375	2	579.319306	1156.62406	3.0999	0.0017958	-2.1314	-0.0012347	0.9685	0.00056107	579.3180564152249	102.37	0.56296	102.32	102.06	102.62	-0.047005					21	13	2	0	0	0	0.37624	1	11147	11147		37.812	22.17	1	223880	+		57902	26923	38686	38702	65671	65671					0.05201103397371298
TKGRKKVFRR	10	Unmodified	_TKGRKKVFRR_					0	0	0			REV__nc|ENSG00000130055|Q9HCC8-2|GDPD2	REV__nc|ENSG00000130055|Q9HCC8-2|GDPD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2463684082031	3	425.942195	1274.80476	-0.6651	-0.00028329	-1.4003	-0.00059644	-2.0654	-0.00087973	426.2757484327967	87.38	0.7454	87.843	87.273	88.018	0.46312					24	17	2	0	0	0	0.37624	1	10261	10261		6.6596	0	1	223210	+		57903	18846	38687	38703	65672	65672					0.1783466656472683
TKGSAGKR	8	Unmodified	_TKGSAGKR_					0	0	0		ENSG00000167850|ENST00000330793|CD300C;ENST00000582319.5_1_17:72462842-72477477:+|nuORF;ENSG00000167851|ENST00000360141|CD300A	ENSG00000167850|ENST00000330793|CD300C	ENSG00000167850|ENST00000330793|CD300C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.7397766113281	2	402.737951	803.46135	1.1618	0.00046791	4.189	0.0016871	5.3508	0.002155	402.7391961988466	34.816	1.4181	35.197	34.934	36.353	0.3812					85	36	4	0	0	0	0.87479	1	2633	2633		30.504	0.6621	1	876330			57904	6333	38688	38704	65673	65673					0.051757647860426914
TKHAIIQAL	9	Unmodified	_TKHAIIQAL_					0	0	0		ENSG00000163217|ENST00000295379|BMP10	ENSG00000163217|ENST00000295379|BMP10	ENSG00000163217|ENST00000295379|BMP10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.3018493652344	2	497.805834	993.597115	-0.20677	-0.00010293	-1.3905	-0.00069218	-1.5972	-0.00079511	497.8047173695521	67.026	1.0445	67.577	66.896	67.941	0.55071					43	31	2	0	0	0	0.76764	1	7381	7381		34.173	7.4796	1	189240			57905	5776	38689	38705	65674	65674					0.10006039576853709
TKHISRIQLSP	11	Unmodified	_TKHISRIQLSP_					0	0	0		ENST00000322315.5_1_19:3590178-3593283:+|nuORF	ENST00000322315.5_1_19:3590178-3593283:+|nuORF	ENST00000322315.5_1_19:3590178-3593283:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.2713623046875	3	427.254216	1278.74082	0.60001	0.00025635	3.2548	0.0013906	3.8548	0.001647	427.2555001165273	37.122	0.49754	37.435	37.288	37.786	0.31312					28	11	3	0	0	0	0.17387	1	2978	2978		21.032	1.7696	1	202610			57906	10047	38690	38706	65675	65675					0.11259841617129496
TKHVRGAG	8	Unmodified	_TKHVRGAG_					0	0	0			REV__nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	REV__nc|ENSG00000188916|Q6ZSG2-2|INSYN2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2366943359375	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.87064	1	7017	7017		29.15	3.6994	1	1692300	+		57907	23044	38691	38707	65676	65676					0.04243184505901354
TKIAQLHS	8	Unmodified	_TKIAQLHS_					0	0	0			REV__ENSG00000186714|ENST00000335185|CCDC73	REV__ENSG00000186714|ENST00000335185|CCDC73	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.26165771484375	2	449.261259	896.507966	-1.3148	-0.0005907	-0.24675	-0.00011085	-1.5616	-0.00070155	449.26091050300573	68.569	0.72878	68.705	68.381	69.11	0.13522					52	29	2	0	0	0	0.86677	1	6175	6175		27.882	2.4321	1	207860	+		57908	22876	38692	38708	65677	65677					0.055572046173210765
TKIAQLHS	8	Unmodified	_TKIAQLHS_					0	0	0			REV__ENSG00000186714|ENST00000335185|CCDC73	REV__ENSG00000186714|ENST00000335185|CCDC73	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.261474609375	2	449.261259	896.507966	-1.2373	-0.00055589	-0.66295	-0.00029784	-1.9003	-0.00085373	449.2607756731413	72.678	0.71947	72.758	72.438	73.158	0.080032					44	25	2	0	0	0	0.89043	1	6666	6666		35.618	0.41757	1	208410	+		57909	22876	38692	38708	65678	65678					0.055572046173210765
TKIASNKL	8	Unmodified	_TKIASNKL_					0	0	0			REV__ENST00000523192.1_1_8:95405967-95411786:-|nuORF	REV__ENST00000523192.1_1_8:95405967-95411786:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7712707519531	2	437.77146	873.528367	-0.10723	-4.6943E-05	-0.31102	-0.00013615	-0.41825	-0.0001831	437.7713100510169	39.948	1.5972	39.9	38.972	40.569	-0.04789					99	48	4	0	0	0	0.80959	1	2470	2470		15.642	1.5047	1	3032300	+		57910	23215	38693	38709	65679	65679					0.08654375277126292
TKIFEHIIVD	10	Unmodified	_TKIFEHIIVD_					0	0	0		ENSG00000153012|ENST00000382114|LGI2	ENSG00000153012|ENST00000382114|LGI2	ENSG00000153012|ENST00000382114|LGI2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5646667480469	3	405.564168	1213.67067	-0.18878	-7.6562E-05	1.7449	0.00070767	1.5561	0.00063111	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.86471	1	5899	5899		22.562	0	1	257140			57911	5208	38694	38710	65680	65680					0.0723854322866373
TKIFEHIIVD	10	Unmodified	_TKIFEHIIVD_					0	0	0		ENSG00000153012|ENST00000382114|LGI2	ENSG00000153012|ENST00000382114|LGI2	ENSG00000153012|ENST00000382114|LGI2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.56475830078125	3	405.564168	1213.67067	0.39528	0.00016031	1.0906	0.00044231	1.4859	0.00060262	405.56450530615757	63.272	1.3532	63.394	62.754	64.107	0.12253					138	58	3	0	0	0	0.8651	1	5537	5537		24.232	0	1	242080			57912	5208	38694	38710	65681	65681					0.0723854322866373
TKIHGVGFV	9	Unmodified	_TKIHGVGFV_					0	0	0		ENSG00000131620|ENST00000355303|ANO1;nc|ENSG00000131620|Q5XXA6-5|ANO1;nc|ENSG00000131620|Q5XXA6-3|ANO1;nc|ENSG00000131620|Q5XXA6-2|ANO1	ENSG00000131620|ENST00000355303|ANO1	ENSG00000131620|ENST00000355303|ANO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27801513671875	2	479.279452	956.544351	-0.097426	-4.6695E-05	-3.4378	-0.0016477	-3.5352	-0.0016944	479.2777564513445	97.555	2.08	97.612	96.988	99.068	0.056831					95	47	3	0	0	0	0.77546	1	10296	10296		31.955	0	1	964120			57913	3738	38695	38711	65682	65682					0.06434081514055379
TKIKLSKFN	9	Unmodified	_TKIKLSKFN_					0	0	0		nc|ENSG00000141446|Q5FWF5-2|ESCO1;ENSG00000141446|ENST00000269214|ESCO1	nc|ENSG00000141446|Q5FWF5-2|ESCO1	nc|ENSG00000141446|Q5FWF5-2|ESCO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	539.832275390625	2	539.834591	1077.65463	-0.61983	-0.00033461	-3.2209	-0.0017387	-3.8407	-0.0020733	539.832722847018	95.45	1.7138	95.45	94.923	96.637	0					80	39	3	0	0	0	0.7932	1	9503	9503		25.574	1.0549	1	535420			57914	4500	38696	38712	65683	65683					0.11890881782437646
TKIKPLGP	8	Unmodified	_TKIKPLGP_					0	0	0		nc|ENSG00000174371|Q9UQ84-4|EXO1;ENSG00000174371|ENST00000366548|EXO1	nc|ENSG00000174371|Q9UQ84-4|EXO1	nc|ENSG00000174371|Q9UQ84-4|EXO1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	427.30279541015625	2	427.278921	852.543289	-1.463	-0.00062512	4.3554	0.001861	2.8923	0.0012358	427.28159880219374	68.636	0.23935	68.636	68.583	68.822	0					12	9	2	0	0	0	0.4196	1	6103	6103		33.516	6.7195	1	41379			57915	6928	38697	38713	65684	65684					0.11111867145132237
TKIKPLGP	8	Unmodified	_TKIKPLGP_					0	0	0		nc|ENSG00000174371|Q9UQ84-4|EXO1;ENSG00000174371|ENST00000366548|EXO1	nc|ENSG00000174371|Q9UQ84-4|EXO1	nc|ENSG00000174371|Q9UQ84-4|EXO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.3025207519531	2	427.278921	852.543289	0.43723	0.00018682	-3.9187	-0.0016744	-3.4815	-0.0014876	427.27652121933005	66.297	0.53364	66.683	66.392	66.926	0.38581					22	13	3	0	0	0	0.4196	1	7200	7200		47.916	21.119	1	200280			57916	6928	38697	38713	65685	65685					0.11111867145132237
TKIKPLGP	8	Unmodified	_TKIKPLGP_					0	0	0		nc|ENSG00000174371|Q9UQ84-4|EXO1;ENSG00000174371|ENST00000366548|EXO1	nc|ENSG00000174371|Q9UQ84-4|EXO1	nc|ENSG00000174371|Q9UQ84-4|EXO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3028564453125	2	427.278921	852.543289	0.19617	8.3818E-05	-2.0103	-0.00085897	-1.8142	-0.00077515	427.27889207272807	66.154	0.62946	66.706	66.268	66.898	0.5526					29	16	3	0	0	0	0.4196	1	7175	7175		31.955	27.639	1	170820			57917	6928	38697	38713	65686	65686					0.11111867145132237
TKIKPLGP	8	Unmodified	_TKIKPLGP_					0	0	0		nc|ENSG00000174371|Q9UQ84-4|EXO1;ENSG00000174371|ENST00000366548|EXO1	nc|ENSG00000174371|Q9UQ84-4|EXO1	nc|ENSG00000174371|Q9UQ84-4|EXO1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	427.278921	852.543289	-1.7237	-0.00073651	8.4778	0.0036224	6.7541	0.0028859	427.28174595841494	68.382	0.30341	68.517	68.479	68.782	0.13522	-0.059111	0.0023881	NaN	33.516	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70580			57918	6928	38697	38713							0.11111867145132237
TKILEEEP	8	Unmodified	_TKILEEEP_					0	0	0			REV__nc|ENSG00000197694|Q13813-3|SPTAN1	REV__nc|ENSG00000197694|Q13813-3|SPTAN1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3079528808594	2	479.758215	957.501877	-1.6495	-0.00079134	2.4221	0.001162	0.7726	0.00037066	479.759182398351	46.54	0.64198	46.54	46.234	46.876	0					22	15	2	0	0	0	0.4196	1	3473	3473		29.15	4.9468	1	79825	+		57919	23259	38698	38714	65687	65687					0.02142641595139594
TKILHVFH	8	Unmodified	_TKILHVFH_					0	0	0		ENSG00000169174|ENST00000302118|PCSK9	ENSG00000169174|ENST00000302118|PCSK9	ENSG00000169174|ENST00000302118|PCSK9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.7530822753906	2	497.795269	993.575986	1.3122	0.00065321	2.3523	0.001171	3.6645	0.0018242	497.7973893324987	35.837	0.14753	36.278	36.186	36.333	0.44043					5	3	2	0	0	0	0.4196	1	2795	2795		7.6903	0	1	73540			57920	6475	38699	38715	65688	65688					0.0789407426799471
TKILPPVE	8	Unmodified	_TKILPPVE_					0	0	0			REV__ENSG00000101825|ENST00000217939|MXRA5	REV__ENSG00000101825|ENST00000217939|MXRA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.7771301269531	2	448.776211	895.537869	-1.1254	-0.00050506	2.6884	0.0012065	1.563	0.00070143	448.77728303951056	42.988	2.0952	42.952	41.858	43.953	-0.035816					102	49	3	0	0	0	0.8347	1	3325	3325		23.042	4.7181	1	216470	+		57921	17304	38700	38716	65689	65689					0.08592143562668753
TKILPPVE	8	Unmodified	_TKILPPVE_					0	0	0			REV__ENSG00000101825|ENST00000217939|MXRA5	REV__ENSG00000101825|ENST00000217939|MXRA5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2611083984375	2	448.776211	895.537869	0.46608	0.00020917	2.8785	0.0012918	3.3446	0.001501	448.7773177732986	69.123	0.87621	69.252	68.65	69.526	0.12839					55	35	2	0	0	0	0.4196	1	6204	6204		10.866	0	1	108620	+		57922	17304	38700	38716	65690	65690					0.08592143562668753
TKIPSPLI	8	Unmodified	_TKIPSPLI_					0	0	0		nc|ENSG00000114473|Q9H095-2|IQCG;ENSG00000114473|ENST00000265239|IQCG	nc|ENSG00000114473|Q9H095-2|IQCG	nc|ENSG00000114473|Q9H095-2|IQCG	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7803039550781	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.484	1	66.611	66.111	67.111	0.12649								0	0	0	0.29755	1	5907	5907		24.203	0	1				57923	2772	38701	38717	65691	65691					0.10388447425293634
TKISTKTP	8	Unmodified	_TKISTKTP_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26312255859375	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.81184	1	2660	2660		19.997	3.5236	1	3673500			57924	7747	38702	38718	65692	65692					0.07010669040232642
TKISTKTP	8	Unmodified	_TKISTKTP_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2629089355469	2	438.263468	874.512382	-1.2142	-0.00053214	0.66524	0.00029155	-0.54896	-0.00024059	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.88185	1	3134	3134		32.812	1.2826	1	4828000			57925	7747	38702	38718	65693	65693					0.07010669040232642
TKISTKTP	8	Unmodified	_TKISTKTP_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633056640625	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.9283	1	3120	3120		49.442	5.3247	1	4268300			57926	7747	38702	38718	65694	65694					0.07010669040232642
TKISTKTP	8	Unmodified	_TKISTKTP_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2634582519531	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.8537	1	1987	1987		25.574	1.0549	1	11160000			57927	7747	38702	38718	65695	65695					0.07010669040232642
TKISTKTP	8	Unmodified	_TKISTKTP_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.25994873046875	2	438.263468	874.512382	-2.4769	-0.0010856	0.22797	9.991E-05	-2.249	-0.00098564	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.8347	1	3649	3649		23.042	0	1	246320000			57928	7747	38702	38718	65696	65696					0.07010669040232642
TKISTVKV	8	Unmodified	_TKISTVKV_					0	0	0		nc|ENSG00000170419|Q8TAG5|VSTM2A;ENSG00000170419|ENST00000402613|VSTM2A;nc|ENSG00000170419|Q8TAG5-2|VSTM2A	nc|ENSG00000170419|Q8TAG5|VSTM2A	nc|ENSG00000170419|Q8TAG5|VSTM2A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2630310058594	2	438.28166	874.548768	0.19266	8.4438E-05	3.9714	0.0017406	4.1641	0.001825	438.283439332661	40.168	0.38319	40.25	40.046	40.429	0.081345					17	11	2	0	0	0	0.4196	1	2516	2516		39.253	5.0803	1	154810			57929	6586	38703	38719	65697	65697					0.1064754593694488
TKISTVKV	8	Unmodified	_TKISTVKV_					0	0	0		nc|ENSG00000170419|Q8TAG5|VSTM2A;ENSG00000170419|ENST00000402613|VSTM2A;nc|ENSG00000170419|Q8TAG5-2|VSTM2A	nc|ENSG00000170419|Q8TAG5|VSTM2A	nc|ENSG00000170419|Q8TAG5|VSTM2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2635803222656	2	438.28166	874.548768	0.2987	0.00013091	-4.4697	-0.001959	-4.171	-0.0018281	438.2788753760213	34.982	0.54229	35.23	34.934	35.477	0.24769					29	13	3	0	0	0	0.4196	1	2605	2605		44.377	5.1244	1	652120			57930	6586	38703	38719	65698	65698					0.1064754593694488
TKITSRKKAM	10	Unmodified	_TKITSRKKAM_					0	0	0			REV__ENSG00000134371|ENST00000367435|CDC73	REV__ENSG00000134371|ENST00000367435|CDC73	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3548583984375	2	582.350083	1162.68561	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.4	1	119.38	118.88	119.88	-0.024033								0	0	0	0.45132	1	13231	13231		19.997	1.7347	1		+		57931	19137	38704	38720	65699	65699					0.11077711824987091
TKIVGEEV	8	Unmodified	_TKIVGEEV_					0	0	0		ENSG00000179057|ENST00000513874|IGSF22;nc|ENSG00000179057|Q8N9C0|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.7738037109375	2	437.74765	873.480748	1.5192	0.00066504	0.52927	0.00023169	2.0485	0.00089672	437.7477225024691	27.731	0.64211	27.476	27.078	27.72	-0.25465					26	14	2	0	0	0	0.4196	1	1606	1606		19.104	0	1	115690			57932	7241	38705	38721	65700	65700					0.038946762862906326
TKKAFIGLESL	11	Unmodified	_TKKAFIGLESL_					0	0	0		ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.906982421875	3	402.907934	1205.70197	1.9688	0.00079325	-3.4926	-0.0014072	-1.5237	-0.00061392	402.9063869778674	22.059	0.52871	21.616	21.326	21.854	-0.44324					26	11	3	0	0	0	0.75121	1	854	854		21.78	0.8335	1	86037			57933	8339	38706	38722	65701	65701					0.10735116262731026
TKKAPLCL	8	Carbamidomethyl (C)	_TKKAPLC(Carbamidomethyl (C))L_	TKKAPLC(1)L		TKKAPLC(41)L		0	1	0		nc|ENSG00000197177|Q86SQ6-2|ADGRA1;ENSG00000197177|ENST00000392607|ADGRA1;nc|ENSG00000197177|Q86SQ6-1|ADGRA1	nc|ENSG00000197177|Q86SQ6-2|ADGRA1	nc|ENSG00000197177|Q86SQ6-2|ADGRA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7767333984375	2	465.775688	929.536823	0.5788	0.00026959	3.5248	0.0016418	4.1036	0.0019114	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.90465	1	7609	7609		40.573	6.4001	1	344270			57934	8146	38707	38723	65702	65702	99				0.06923605922099796
TKKAVPPA	8	Unmodified	_TKKAVPPA_					0	0	0		ENST00000395285.3_1_20:61917669-61919222:+|nuORF;ENST00000370275.8_2_20:61917492-61919222:+|nuORF;ENST00000518618.2_1_20:61917181-61919222:+|nuORF;ENST00000468975.6_1_20:61915834-61919222:+|nuORF;nc|ENSG00000101199|Q8N6T3-4|ARFGAP1;nc|ENSG00000101199|Q8N6T3-5|ARFGAP1;ENSG00000101199|ENST00000370283|ARFGAP1;nc|ENSG00000101199|Q8N6T3-2|ARFGAP1	ENST00000395285.3_1_20:61917669-61919222:+|nuORF	ENST00000395285.3_1_20:61917669-61919222:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2575988769531	2	406.255446	810.496338	0.12581	5.111E-05	3.5587	0.0014458	3.6846	0.0014969	406.25676185595603	33.224	0.95024	33.334	33.07	34.021	0.10991					93	41	3	0	0	0	0.86288	1	1613	1613		26.796	4.8362	1	425420			57935	1911	38708	38724	65703	65703					0.08351007593978466
TKKAVPPA	8	Unmodified	_TKKAVPPA_					0	0	0		ENST00000395285.3_1_20:61917669-61919222:+|nuORF;ENST00000370275.8_2_20:61917492-61919222:+|nuORF;ENST00000518618.2_1_20:61917181-61919222:+|nuORF;ENST00000468975.6_1_20:61915834-61919222:+|nuORF;nc|ENSG00000101199|Q8N6T3-4|ARFGAP1;nc|ENSG00000101199|Q8N6T3-5|ARFGAP1;ENSG00000101199|ENST00000370283|ARFGAP1;nc|ENSG00000101199|Q8N6T3-2|ARFGAP1	ENST00000395285.3_1_20:61917669-61919222:+|nuORF	ENST00000395285.3_1_20:61917669-61919222:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25543212890625	2	406.255446	810.496338	0.016868	6.8526E-06	3.7223	0.0015122	3.7391	0.001519	406.25685626914105	33.24	0.97973	33.208	32.974	33.953	-0.032677					91	43	3	0	0	0	0.7961	1	1658	1658		17.365	2.7009	1	414640			57936	1911	38708	38724	65704	65704					0.08351007593978466
TKKESTLE	8	Unmodified	_TKKESTLE_					0	0	0			REV__ENST00000502634.1_1_5:20304521-20305535:-|nuORF	REV__ENST00000502634.1_1_5:20304521-20305535:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.2572326660156	2	468.25584	934.497126	0.60478	0.00028319	-2.7651	-0.0012948	-2.1603	-0.0010116	468.25441943244317	81.627	3.5592	81.77	80.781	84.34	0.14352					144	82	2	0	0	0	0.89962	1	7861	7861		38.806	3.6054	1	205460	+		57937	27827	38709	38725	65705	65705					0.027257574523787298
TKKGAWKLTKV	11	Unmodified	_TKKGAWKLTKV_					0	0	0			REV__ENST00000406606.7_3_9:136628319-136628436:-|nuORF	REV__ENST00000406606.7_3_9:136628319-136628436:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7745056152344	3	420.599324	1258.77614	-1.5992	-0.00067261	-3.6474	-0.0015341	-5.2466	-0.0022067	420.59784570284285	41.732	0.45153	42.145	41.937	42.389	0.4139					21	11	3	0	0	0	0.17521	1	3680	3680		17.167	0	1	348240	+		57938	26305	38710	38726	65706	65706					0.15710504144908555
TKKGLYNY	8	Unmodified	_TKKGLYNY_					0	0	0			REV__ENST00000463899.5_1_1:182781291-182795122:+|nuORF	REV__ENST00000463899.5_1_1:182781291-182795122:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.73199462890625	2	493.768917	985.523281	-1.0775	-0.00053201	0.62999	0.00031107	-0.44746	-0.00022094	493.7691592371108	45.085	0.61506	45.549	45.224	45.839	0.46313					30	14	3	0	0	0	0.4196	1	4184	4184		21.96	5.4867	1	512690	+		57939	19257	38711	38727	65707	65707					0.029940714145027414
TKKGVVTPK	9	Unmodified	_TKKGVVTPK_					0	0	0		nc|ENSG00000156256|Q9Y5T5-5|USP16;ENST00000474835.5_1_21:30400234-30414894:+|nuORF;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-2|USP16;ENSG00000156256|ENST00000399976|USP16	nc|ENSG00000156256|Q9Y5T5-5|USP16	nc|ENSG00000156256|Q9Y5T5-5|USP16	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.31024169921875	2	479.30821	956.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.796	1	50.846	50.346	51.346	0.049896								0	0	0	0.29796	1	4013	4013		31.53	7.3271	1				57940	5371	38712	38728	65708	65708					0.12182923719603878
TKKIAVIC	8	Unmodified	_TKKIAVIC_					0	0	0		ENST00000237380.11_1_4:17623258-17625243:+|nuORF	ENST00000237380.11_1_4:17623258-17625243:+|nuORF	ENST00000237380.11_1_4:17623258-17625243:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2601623535156	2	438.272781	874.531009	0.21649	9.4884E-05	-0.36502	-0.00015998	-0.14853	-6.5095E-05	438.2725803766163	41.312	0.16251	41.281	41.141	41.303	-0.030991					6	4	2	0	0	0	0.4196	1	3003	3003		7.6903	0	1	154240			57941	9237	38713	38729	65709	65709					0.08872507410433172
TKKIGLKTHLG	11	Unmodified	_TKKIGLKTHLG_					0	0	0			REV__ENST00000357585.3_2_17:71167612-71167879:+|nuORF	REV__ENST00000357585.3_2_17:71167612-71167879:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3817749023438	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.72918	1	2745	2745		26.693	0.62953	1	352020	+		57942	25416	38714	38730	65710	65710					0.15525931110823876
TKKIGLKTHLG	11	Unmodified	_TKKIGLKTHLG_					0	0	0			REV__ENST00000357585.3_2_17:71167612-71167879:+|nuORF	REV__ENST00000357585.3_2_17:71167612-71167879:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3809814453125	2	598.379697	1194.74484	-0.19423	-0.00011622	3.3027	0.0019763	3.1085	0.00186	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.69995	1	2984	2984		31.53	2.3803	1	825320	+		57943	25416	38714	38730	65711	65711					0.15525931110823876
TKKIGLKTHLG	11	Unmodified	_TKKIGLKTHLG_					0	0	0			REV__ENST00000357585.3_2_17:71167612-71167879:+|nuORF	REV__ENST00000357585.3_2_17:71167612-71167879:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.8803100585938	2	598.379697	1194.74484	-0.74115	-0.00044349	3.5243	0.0021089	2.7832	0.0016654	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.7144	1	3050	3050		29.17	8.2231	1	772980	+		57944	25416	38714	38730	65712	65712					0.15525931110823876
TKKIGLKTHLG	11	Unmodified	_TKKIGLKTHLG_					0	0	0			REV__ENST00000357585.3_2_17:71167612-71167879:+|nuORF	REV__ENST00000357585.3_2_17:71167612-71167879:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.8840942382812	2	598.379697	1194.74484	0.38806	0.00023221	2.9197	0.0017471	3.3077	0.0019793	598.3812845043491	40.552	1.126	40.504	40.15	41.276	-0.04789					105	43	3	0	0	0	0.66009	1	2650	2650		37.508	7.1905	1	664060	+		57945	25416	38714	38730	65713	65713					0.15525931110823876
TKKIGLKTHLG	11	Unmodified	_TKKIGLKTHLG_					0	0	0			REV__ENST00000357585.3_2_17:71167612-71167879:+|nuORF	REV__ENST00000357585.3_2_17:71167612-71167879:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3816528320312	2	598.379697	1194.74484	-1.3328	-0.00079753	3.7818	0.002263	2.449	0.0014655	598.3818526094551	40.308	0.87541	40.701	40.092	40.968	0.39209					91	22	5	0	0	0	0.61369	1	3416	3416		42.864	5.0528	1	10750000	+		57946	25416	38714	38730	65714	65714					0.15525931110823876
TKKIKLLH	8	Unmodified	_TKKIKLLH_					0	0	0			REV__ENSG00000174501|ENST00000295246|ANKRD36C	REV__ENSG00000174501|ENST00000295246|ANKRD36C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7950134277344	2	490.834394	979.654236	-0.95733	-0.00046989	-0.76458	-0.00037528	-1.7219	-0.00084517	490.8339545587575	44.382	0.3629	44.833	44.649	45.012	0.45025					12	8	2	0	0	0	0.4196	1	4095	4095		31.955	6.5047	1	210970	+		57947	21999	38715	38731	65715	65715					0.1635950685321177
TKKIVELGVLP	11	Unmodified	_TKKIVELGVLP_					0	0	0			REV__nc|ENSG00000164694|Q4ZHG4-2|FNDC1	REV__nc|ENSG00000164694|Q4ZHG4-2|FNDC1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	598.8814697265625	2	598.884281	1195.75401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.843	1	40.925	40.425	41.425	0.081345								0	0	0	0.56276	1	2626	2626		19.997	0	1		+		57948	21106	38716	38732	65716	65716					0.16396279676519043
TKKKEIALHK	10	Unmodified	_TKKKEIALHK_					0	0	0			REV__ENST00000389600.6_1_13:51590304-51594849:-|nuORF	REV__ENST00000389600.6_1_13:51590304-51594849:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3821411132812	2	598.379697	1194.74484	-0.19423	-0.00011622	3.3027	0.0019763	3.1085	0.00186	598.3815444568976	41.1	1.2843	41.069	40.339	41.624	-0.030991					93	36	3	0	0	0	0.86763	1	3026	3026		26.693	2.4902	1	825320	+		57949	25997	38717	38733	65717	65717					0.1552593111080114
TKKKHLKKS	9	Unmodified	_TKKKHLKKS_					0	0	0		ENSG00000135144|ENST00000548759|DTX1	ENSG00000135144|ENST00000548759|DTX1	ENSG00000135144|ENST00000548759|DTX1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3587646484375	2	549.361308	1096.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.578	1	44.626	44.126	45.126	0.048996								0	0	0	0.29796	1	3154	3154		31.53	7.0106	1				57950	3989	38718	38734	65718	65718					0.16357679284942606
TKKKKKKKKMR	11	Unmodified	_TKKKKKKKKMR_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.9930114746094	3	477.993791	1430.95954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.952	1	73.337	72.837	73.837	0.38581								0	0	0	0.56276	1	8168	8168		5.1424	0.25623	1				57951	10555	38719	38735	65719	65719					0.2613015465492481
TKKKKKKLIR	10	Unmodified	_TKKKKKKLIR_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.3057861328125	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.42	1	34.459	33.959	34.959	0.038643								0	0	0	0.45132	1	1737	1737		4.3388	2.4519	1		+		57952	26553	38720	38736	65720	65720					0.27310751578238524
TKKKKKSV	8	Unmodified	_TKKKKKSV_					0	0	0			REV__nc|ENSG00000054523|O60333-2|KIF1B	REV__nc|ENSG00000054523|O60333-2|KIF1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.8213195800781	2	473.824027	945.633501	-1.811	-0.00085809	-2.8905	-0.0013696	-4.7015	-0.0022277	473.82255707723726	37.572	1.2199	37.572	37.042	38.262	0					48	28	3	0	0	0	0.95912	1	2270	2270		4.3163	0	1	126770	+		57953	29693	38721	38737	65721	65721					0.15850916473561938
TKKKKVPRDVS	11	Unmodified	_TKKKKVPRDVS_					0	0	0			REV__ENSG00000092529|ENST00000397163|CAPN3	REV__ENSG00000092529|ENST00000397163|CAPN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	643.4017333984375	2	643.401161	1284.78777	5.4431	0.0035021	3.1861	0.0020499	8.6292	0.0055521	643.4034130492915	105.51	1.5585	105.7	104.97	106.53	0.18647					125	47	4	0	0	0	0.69931	1	12902	12902		31.634	1.3165	1	751890	+		57954	17035	38722	38738	65722	65722					0.15676701168263207
TKKKKVWI	8	Unmodified	_TKKKKVWI_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8287353515625	2	515.84222	1029.66989	0.20665	0.0001066	3.7328	0.0019256	3.9395	0.0020322	515.8440926446086	83.044	0.52974	83.517	83.172	83.702	0.47383					16	12	2	0	0	0	0.4196	1	9682	9682		27.882	4.8398	1	459330			57955	3009	38723	38739	65723	65723					0.15623793370264139
TKKKLGEA	8	Unmodified	_TKKKLGEA_					0	0	0			REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|33|1|sense	REV__L1MA3_dup3731|chr6:133486812-133491669:+|3.26162253378513|0.0549703124466373|5.89|62.0|33|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7707824707031	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.81567	1	2240	2240		14.865	0.72775	1	1151500	+		57956	29466	38724	38740	65724	65724					0.0865437527713766
TKKKLYLICSL	11	Unmodified	_TKKKLYLICSL_					0	0	0			REV__chr1:32672901-32677298|37|23.22|0.37|5.98|+|0|TE_info:MER21C,MER21C_dup84,ERVL,LTR,acceptor,+,32677298,32677775|RBBP4,None|2	REV__chr1:32672901-32677298|37|23.22|0.37|5.98|+|0|TE_info:MER21C,MER21C_dup84,ERVL,LTR,acceptor,+,32677298,32677775|RBBP4,None|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2673645019531	3	437.268586	1308.78393	0.31383	0.00013723	-2.0718	-0.00090591	-1.7579	-0.00076869	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.74344	1	4465	4465		23.514	2.6772	1	2521600	+		57957	15448	38725	38741	65725	65725					0.1418889535020753
TKKKMKMKKLH	11	Unmodified	_TKKKMKMKKLH_					0	0	0			REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.6235046386719	3	467.624599	1399.85197	-0.9763	-0.00045654	-1.6525	-0.00077273	-2.6288	-0.0012293	467.62378407363303	107.84	0.75049	107.98	107.28	108.03	0.13866					91	18	6	0	0	0	0.72892	1	11538	11538		26.75	5.7175	1	26120000	+		57958	28650	38726	38742	65726	65726					0.16803441729211954
TKKKMKMKKLH	11	Unmodified	_TKKKMKMKKLH_					0	0	0			REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	467.62359619140625	3	467.624599	1399.85197	0.7713	0.00036068	-2.9294	-0.0013698	-2.1581	-0.0010092	467.623137961311	107.87	0.64194	107.95	107.37	108.01	0.084404					70	15	6	0	0	0	0.72892	1	11566	11566		26.75	0.85799	1	22591000	+		57959	28650	38726	38742	65727	65727					0.16803441729211954
TKKKMKMKKLH	11	Unmodified	_TKKKMKMKKLH_					0	0	0			REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.6234436035156	3	467.624599	1399.85197	-1.7204	-0.00080451	-0.19791	-9.2549E-05	-1.9183	-0.00089705	467.62444178196154	107.87	0.60316	107.91	107.33	107.93	0.036118					61	14	6	0	0	0	0.72892	1	11487	11487		26.75	2.5179	1	13916000	+		57960	28650	38726	38742	65728	65728					0.16803441729211954
TKKKMKMKKLH	11	Unmodified	_TKKKMKMKKLH_					0	0	0			REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	467.624599	1399.85197	-0.88899	-0.00041571	-0.91119	-0.0004261	-1.8002	-0.00084181	467.62409563201845	107.82	0.18402	107.82	107.65	107.83	0	0.012123	0.0035156	NaN	26.75	15	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14512000	+		57961	28650	38726	38742							0.16803441729211954
TKKKMKMKKLH	11	Unmodified	_TKKKMKMKKLH_					0	0	0			REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	467.624599	1399.85197	-0.11459	-5.3584E-05	-2.5295	-0.0011829	-2.6441	-0.0012365	467.6233539031988	107.88	0.23409	107.84	107.65	107.89	-0.042404	0.030088	0.0012452	NaN	26.75	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16763000	+		57962	28650	38726	38742							0.16803441729211954
TKKKMKMKKLH	11	Unmodified	_TKKKMKMKKLH_					0	0	0			REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	467.624599	1399.85197	2.7928	0.001306	-4.9458	-0.0023128	-2.153	-0.0010068	467.95666174308354	107.89	0.32074	107.86	107.6	107.92	-0.031487	0.057677	-0.0021445	NaN	26.75	23	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18500000	+		57963	28650	38726	38742							0.16803441729211954
TKKKMKMKKLH	11	Unmodified	_TKKKMKMKKLH_					0	0	0			REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	467.624599	1399.85197	0.26151	0.00012229	-1.9374	-0.00090597	-1.6759	-0.00078368	467.6235907546661	107.88	0.45378	107.92	107.52	107.97	0.035622	0.11027	0.0020759	NaN	26.75	34	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19594000	+		57964	28650	38726	38742							0.16803441729211954
TKKKMKMKKLH	11	Unmodified	_TKKKMKMKKLH_					0	0	0			REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	467.624599	1399.85197	1.6589	0.00077574	-3.4572	-0.0016167	-1.7983	-0.00084094	467.622890225129	107.4	0.49144	107.5	107.27	107.76	0.10395	-0.30526	-5.6221E-05	NaN	26.75	64	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	512380	+		57965	28650	38726	38742							0.16803441729211954
TKKKMKMKKLH	11	Unmodified	_TKKKMKMKKLH_					0	0	0			REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	REV__ENST00000553612.5_1_14:81651936-81658969:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	467.624599	1399.85197	4.2236	0.0019751	-6.0841	-0.0028451	-1.8605	-0.00087	467.6216642662339	107.33	0.62836	107.48	107.24	107.87	0.14561	-0.32954	-0.0037414	NaN	26.75	64	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	481390	+		57966	28650	38726	38742							0.16803441729211954
TKKKRGGG	8	Unmodified	_TKKKRGGG_					0	0	0			REV__ENSG00000215612|ENST00000400677|HMX1	REV__ENSG00000215612|ENST00000400677|HMX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.2602233886719	2	416.261594	830.508634	0.34013	0.00014158	-2.8416	-0.0011829	-2.5015	-0.0010413	416.2602651991648	16.847	0.70345	16.236	16.048	16.752	-0.6107					24	15	2	0	0	0	0.82658	1	186	186		21.96	0.25755	1	201780	+		57967	23688	38727	38743	65729	65729					0.08660044057046434
TKKKRKKKKV	10	Unmodified	_TKKKRKKKKV_					0	0	0			REV__nc|ENSG00000187624|Q6ZQX7-2|LIAT1	REV__nc|ENSG00000187624|Q6ZQX7-2|LIAT1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.6390075683594	3	424.638113	1270.89251	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.653	1	35.034	34.534	35.534	0.3812								0	0	0	0.45132	1	2603	2603		14.694	0	1		+		57968	22928	38728	38744	65730	65730					0.26789867435468295
TKKKRKKKKV	10	Unmodified	_TKKKRKKKKV_					0	0	0			REV__nc|ENSG00000187624|Q6ZQX7-2|LIAT1	REV__nc|ENSG00000187624|Q6ZQX7-2|LIAT1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.6390380859375	3	424.638113	1270.89251	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.212	1	37.698	37.198	38.198	0.48581								0	0	0	0.45132	1	2990	2990		11.097	1.4506	1		+		57969	22928	38728	38744	65731	65731					0.26789867435468295
TKKKVATKHKS	11	Unmodified	_TKKKVATKHKS_					0	0	0			REV__ENSG00000272636|ENST00000613549|DOC2B	REV__ENSG00000272636|ENST00000613549|DOC2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7738342285156	3	419.266345	1254.7772	-1.537	-0.0006444	-2.9825	-0.0012505	-4.5195	-0.0018949	419.2651039689667	41.533	0.72544	42.167	41.743	42.468	0.6339					21	19	2	0	0	0	0.17391	1	3619	3619		28.384	6.698	1	264400	+		57970	23987	38729	38745	65732	65732					0.1600071851382836
TKKQHRKKN	9	Unmodified	_TKKQHRKKN_					0	0	0		ENSG00000176542|ENST00000316407|USF3	ENSG00000176542|ENST00000316407|USF3	ENSG00000176542|ENST00000316407|USF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	584.3568725585938	2	584.357088	1166.69962	-1.3402	-0.00078317	-0.53401	-0.00031205	-1.8742	-0.0010952	584.3568464329793	92.429	3.0691	92.615	91.162	94.231	0.18582					184	72	3	0	0	0	0.7932	1	9331	9331		23.042	2.0956	1	728420			57971	7087	38730	38746	65733	65733					0.122941253683166
TKKRASHK	8	Unmodified	_TKKRASHK_					0	0	0		ENSG00000124596|ENST00000424266|OARD1	ENSG00000124596|ENST00000424266|OARD1	ENSG00000124596|ENST00000424266|OARD1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.3120422363281	2	478.293425	954.572297	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.446	1	64.412	63.912	64.912	-0.034256								0	0	0	0.29245	1	6150	6150		30.504	1.3541	1				57972	3348	38731	38747	65734	65734					0.09319404494124228
TKKRKNLMRNR	11	Unmodified	_TKKRKNLMRNR_					0	0	0			REV__ENST00000399503.3_1_5:56189513-56189579:+|nuORF	REV__ENST00000399503.3_1_5:56189513-56189579:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.2915344238281	3	482.292899	1443.85687	0.85471	0.00041222	-0.80323	-0.00038739	0.05148	2.4828E-05	482.2922144182275	16.759	0.31462	16.272	16.098	16.412	-0.48718					20	6	4	0	0	0	0.76892	1	173	173		17.833	0.6664	1	94225	+		57973	26227	38732	38748	65735	65735					0.1526946191618208
TKKRKRRRRRS	11	Unmodified	_TKKRKRRRRRS_					0	0	0		ENST00000467963.5_3_5:889215-891867:-|nuORF;nc|ENSG00000028310|Q9H8M2-6|BRD9;chr5:891854-892509|63|15.83|0.37|5.41|-|ENST00000483173|BRD9,BRD9	ENST00000467963.5_3_5:889215-891867:-|nuORF	ENST00000467963.5_3_5:889215-891867:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.2889404296875	3	510.001219	1526.98183	-0.49039	-0.0002501	3.5833	0.0018275	3.0929	0.0015774	510.33760971320834	23.853	0.11459	23.906	23.827	23.941	0.05291					7	4	2	0	0	0	0.18425	1	786	786		0	0	1	78531			57974	461	38733	38749	65736	65736					0.23941515167575744
TKKRLIPLVL	10	Unmodified	_TKKRLIPLVL_					0	0	0			REV__ENST00000268182.9_1_15:90996487-90997676:+|nuORF	REV__ENST00000268182.9_1_15:90996487-90997676:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8666381835938	2	590.910633	1179.80671	-0.64323	-0.00038009	3.0871	0.0018242	2.4439	0.0014441	590.9125365388326	103.95	0.37691	103.95	103.82	104.2	-0.0035706					9	7	2	0	0	0	0.37624	1	11182	11182		15.642	2.1878	1	71847	+		57975	24513	38734	38750	65737	65737					0.2240028252999764
TKKRLIPLVL	10	Unmodified	_TKKRLIPLVL_					0	0	0			REV__ENST00000268182.9_1_15:90996487-90997676:+|nuORF	REV__ENST00000268182.9_1_15:90996487-90997676:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8665161132812	2	590.910633	1179.80671	-0.64259	-0.00037972	1.9193	0.0011341	1.2767	0.0007544	590.9118463903673	103.54	0.20165	103.55	103.36	103.56	0.0082016					8	4	3	0	0	0	0.37624	1	11122	11122		15.642	0.77694	1	142650	+		57976	24513	38734	38750	65738	65738					0.2240028252999764
TKKRTKTIYGN	11	Unmodified	_TKKRTKTIYGN_					0	0	0		chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A;chr19:17618962-17624829|52|21.02|0.18|6.91|-|ENST00000552293|UNC13A,UNC13A;ENSG00000130477|ENST00000519716|UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.25616455078125	3	437.257738	1308.75138	2.3979	0.0010485	-3.3832	-0.0014793	-0.98538	-0.00043086	437.25617297786823	99.22	2.8692	99.166	98.246	101.11	-0.053734					176	66	3	0	0	0	0.72892	1	10853	10853		26.75	0.85799	1	988170			57977	266	38735	38751	65739	65739					0.10935824271564343
TKKSNVDARW	10	Unmodified	_TKKSNVDARW_					0	0	0			REV__nc|ENSG00000134982|P25054-2|APC	REV__nc|ENSG00000134982|P25054-2|APC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	603.771240234375	2	602.825286	1203.63602	-0.35061	-0.00021136	-0.84274	-0.00050803	-1.1934	-0.00071938	602.8245306291719	49.471	0.62003	49.468	49.18	49.8	-0.0030327					19	13	2	0	0	0	0.37624	1	4157	4157		25.574	4.7369	1	90247	+		57978	19180	38736	38752	65740	65740					0.04234720140539139
TKKSQLVLLRV	11	Unmodified	_TKKSQLVLLRV_					0	0	0			REV__ENST00000562994.5_2_16:86580251-86585743:-|nuORF	REV__ENST00000562994.5_2_16:86580251-86585743:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7489013671875	3	428.950245	1283.82891	-2.2647	-0.00097144	1.0461	0.00044871	-1.2186	-0.00052273	428.9507223137838	41.071	0.42216	41.463	41.343	41.765	0.39209					15	11	2	0	0	0	0.17331	1	3573	3573		30.139	3.3894	1	661510	+		57979	17399	38737	38753	65741	65741					0.19834462207722936
TKKTRQELEHQ	11	Unmodified	_TKKTRQELEHQ_					0	0	0			REV__ENSG00000165813|ENST00000369287|CCDC186	REV__ENSG00000165813|ENST00000369287|CCDC186	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.591064453125	3	466.588035	1396.74228	-0.11305	-5.2749E-05	2.8078	0.0013101	2.6947	0.0012573	466.589270448406	58.418	0.72167	58.404	58.111	58.833	-0.013641					61	25	4	0	0	0	0.74002	1	5345	5345		24.276	0.89802	1	239310	+		57980	21223	38738	38754	65742	65742					0.05977430915231707
TKKVHLWG	8	Unmodified	_TKKVHLWG_					0	0	0		ENSG00000152443|ENST00000317178|ZNF776	ENSG00000152443|ENST00000317178|ZNF776	ENSG00000152443|ENST00000317178|ZNF776	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	484.9582824707031	2	484.787444	967.560336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.419	1	75.419	74.919	75.919	0								0	0	0	0.29568	1	6832	6832		35.201	4.6971	1				57981	5175	38739	38755	65743	65743					0.07525787750944346
TKKVHPGA	8	Unmodified	_TKKVHPGA_					0	0	0		ENSG00000100987|ENST00000376709|VSX1	ENSG00000100987|ENST00000376709|VSX1	ENSG00000100987|ENST00000376709|VSX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.2514953613281	2	419.250695	836.486836	1.0523	0.00044116	-0.96885	-0.00040619	0.083413	3.4971E-05	419.2501531023733	23.766	1.2209	23.385	22.887	24.108	-0.38178					65	27	4	0	0	0	0.87479	1	1123	1123		30.504	0	1	1322000			57982	1890	38740	38756	65744	65744					0.06205239308462751
TKKVKGGM	8	Unmodified	_TKKVKGGM_					0	0	0			REV__ENST00000369304.7_1_1:145524962-145527628:+|nuORF	REV__ENST00000369304.7_1_1:145524962-145527628:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	424.7550354003906	2	424.754756	847.494958	-1.9202	-0.00081559	3.1915	0.0013556	1.2714	0.00054002	424.7559612566375	37.287	1.8192	37.287	36.822	38.642	0					90	43	3	0	0	0	0.83058	1	2217	2217		12.959	0.75233	1	792400	+		57983	25619	38741	38757	65745	65745					0.06511050233598326
TKKYDQKGIQ	10	Unmodified	_TKKYDQKGIQ_					0	0	0			REV__ENSG00000205133|ENST00000521988|TRIQK	REV__ENSG00000205133|ENST00000521988|TRIQK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.5592041015625	3	403.559305	1207.65609	-0.38238	-0.00015431	2.1758	0.00087806	1.7934	0.00072374	403.56005878614496	22.792	0.9348	22.733	22.419	23.353	-0.058668					76	31	3	0	0	0	0.86549	1	798	798		29.551	0	1	169720	+		57984	23542	38742	38758	65746	65746					0.060564710805238064
TKLAEKSS	8	Unmodified	_TKLAEKSS_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	432.2451477050781	2	432.245275	862.475997	2.2492	0.0009722	2.217	0.00095827	4.4662	0.0019305	432.24608940248754	98.153	1.1777	98.098	97.645	98.823	-0.054825					59	26	3	0	0	0	0.88601	1	10621	10621		34.173	6.2903	1	400370			57985	7373	38743	38759	65747	65747					0.039257921435250864
TKLAEKSS	8	Unmodified	_TKLAEKSS_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.24615478515625	2	432.245275	862.475997	2.4229	0.0010473	1.5062	0.00065104	3.9291	0.0016983	432.2459630773034	97.921	1.1428	97.969	97.579	98.722	0.048157					63	25	4	0	0	0	0.89043	1	10430	10430		35.618	0	1	431540			57986	7373	38743	38759	65748	65748					0.039257921435250864
TKLAEKSS	8	Unmodified	_TKLAEKSS_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.2463684082031	2	432.245275	862.475997	0.71048	0.0003071	3.2596	0.001409	3.9701	0.0017161	432.2467662501791	97.978	1.1971	98.139	97.71	98.908	0.16073					69	26	4	0	0	0	0.86677	1	10192	10192		27.882	4.8455	1	628050			57987	7373	38743	38759	65749	65749					0.039257921435250864
TKLASGKLG	9	Unmodified	_TKLASGKLG_					0	0	0		ENSG00000275700|ENST00000619387|AATF	ENSG00000275700|ENST00000619387|AATF	ENSG00000275700|ENST00000619387|AATF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7713928222656	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.7932	1	3031	3031		14.137	0	1	9763800			57988	9006	38744	38760	65750	65750					0.0865437527713766
TKLASGKLG	9	Unmodified	_TKLASGKLG_					0	0	0		ENSG00000275700|ENST00000619387|AATF	ENSG00000275700|ENST00000619387|AATF	ENSG00000275700|ENST00000619387|AATF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713623046875	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.7932	1	3023	3023		14.137	1.1779	1	13476000			57989	9006	38744	38760	65751	65751					0.0865437527713766
TKLEKLSG	8	Unmodified	_TKLEKLSG_					0	0	0			REV__ENST00000297109.10_1_5:153835699-153835933:+|nuORF	REV__ENST00000297109.10_1_5:153835699-153835933:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26129150390625	2	438.263468	874.512382	-1.2142	-0.00053214	0.66524	0.00029155	-0.54896	-0.00024059	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.89679	1	3124	3124		37.812	0.65241	1	4828000	+		57990	24723	38745	38761	65752	65752					0.07010669040244011
TKLETQTTY	9	Unmodified	_TKLETQTTY_					0	0	0			REV__L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|11|1|sense	REV__L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|11|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	542.77880859375	2	542.779679	1083.5448	-0.20343	-0.00011042	0.21327	0.00011576	0.0098399	5.3409E-06	542.7796400144206	34.431	0.88705	34.427	34.044	34.931	-0.0047417					51	21	4	0	0	0	0.30689	1	2057	2057		64.207	4.089	1	360540	+		57991	29623	38746	38762	65753	65753					0.0063741165256487875
TKLEVAVL	8	Unmodified	_TKLEVAVL_					0	0	0		nc|ENSG00000100033|O43272-2|PRODH;nc|ENSG00000100033|O43272-1|PRODH;ENSG00000100033|ENST00000357068|PRODH;ENST00000482858.5_1_22:18909836-18910458:-|nuORF;ENST00000399694.1_1_22:18909836-18910792:-|nuORF;ENST00000438948.1_1_22:20287467-20300466:+|nuORF;ENST00000491604.5_1_22:18909836-18923800:-|nuORF;ENST00000429300.5_1_22:18905996-18910521:-|nuORF	nc|ENSG00000100033|O43272-2|PRODH;ENST00000429300.5_1_22:18905996-18910521:-|nuORF	ENST00000429300.5_1_22:18905996-18910521:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7760009765625	2	436.776211	871.537869	-2.0766	-0.000907	-3.9909	-0.0017431	-6.0675	-0.0026502	436.7744184885527	26.616	0.44571	26.616	26.401	26.847	0					29	19	2	0	0	0	0.89043	1	1033	1033		35.618	6.4687	1	39578			57992	1787;11608	38747	38763	65754	65754					0.09696143562666748
TKLGAPLR	8	Unmodified	_TKLGAPLR_					0	0	0		ENSG00000278803|ENST00000458091|PWWP4	ENSG00000278803|ENST00000458091|PWWP4	ENSG00000278803|ENST00000458091|PWWP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.30255126953125	2	428.27417	854.533787	0.43176	0.00018491	-3.1088	-0.0013314	-2.677	-0.0011465	428.2705742594778	63.556	0.20936	64.111	64.003	64.213	0.55449					7	4	2	0	0	0	0.4196	1	6874	6874		34.173	8.7224	1	37143			57993	9035	38748	38764	65755	65755					0.10070098859614518
TKLGNIKT	8	Unmodified	_TKLGNIKT_					0	0	0		ENSG00000010322|ENST00000345716|NISCH;ENST00000489895.5_1_3:52512001-52514911:+|nuORF;nc|ENSG00000010322|Q9Y2I1-4|NISCH;nc|ENSG00000010322|Q9Y2I1-3|NISCH	ENSG00000010322|ENST00000345716|NISCH	ENSG00000010322|ENST00000345716|NISCH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7714538574219	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.82136	1	2911	2911		14.137	0	1	9763800			57994	767	38749	38765	65756	65756					0.08654375277149029
TKLGTRYKIA	10	Unmodified	_TKLGTRYKIA_					0	0	0		ENST00000469678.1_1_3:53259917-53265542:-|nuORF	ENST00000469678.1_1_3:53259917-53265542:-|nuORF	ENST00000469678.1_1_3:53259917-53265542:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8494262695312	2	575.850773	1149.68699	2.5497	0.0014682	-3.8155	-0.0021972	-1.2659	-0.00072894	575.8483282068971	102.55	0.2962	102.85	102.68	102.98	0.29864					15	6	3	0	0	0	0.86272	1	12499	12499		24.519	0.99649	1	378470			57995	12206	38750	38766	65757	65757					0.11813669185426079
TKLGVPQH	8	Unmodified	_TKLGVPQH_					0	0	0			REV__ENST00000469781.5_1_1:228288681-228288828:-|nuORF	REV__ENST00000469781.5_1_1:228288681-228288828:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.25531005859375	2	440.255977	878.497401	0.40701	0.00017919	-1.6183	-0.00071247	-1.2113	-0.00053328	440.25507557275375	63.556	1.6285	64.111	63.598	65.226	0.55449					91	38	4	0	0	0	0.85277	1	6881	6881		25.45	3.7478	1	1465000	+		57996	27202	38751	38767	65758	65758					0.05329221962892916
TKLHKAVF	8	Unmodified	_TKLHKAVF_					0	0	0			REV__ENSG00000143384|ENST00000369026|MCL1	REV__ENSG00000143384|ENST00000369026|MCL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2877197265625	2	472.28982	942.565087	-0.38046	-0.00017969	-3.8175	-0.001803	-4.198	-0.0019827	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.89043	1	11619	11619		35.618	3.6634	1	24731000	+		57997	19803	38752	38768	65759	65759					0.09150671893701201
TKLILTYSL	9	Unmodified	_TKLILTYSL_					0	0	0			REV__ENSG00000205328|ENST00000379665|OR6C65	REV__ENSG00000205328|ENST00000379665|OR6C65	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3233032226562	2	526.323525	1050.6325	0.48631	0.00025596	1.9952	0.0010501	2.4815	0.0013061	526.3244623018427	62.826	0.99297	62.947	62.385	63.378	0.1209					77	46	2	0	0	0	0.7932	1	5482	5482		26.693	2.4902	1	145820	+		57998	23551	38753	38769	65760	65760					0.10920657313999982
TKLKNPQDYIN	11	Unmodified	_TKLKNPQDYIN_					0	0	0		nc|ENSG00000103544|Q7Z3J2-2|VPS35L;ENSG00000103544|ENST00000417362|VPS35L	nc|ENSG00000103544|Q7Z3J2-2|VPS35L	nc|ENSG00000103544|Q7Z3J2-2|VPS35L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	445.63592529296875	3	445.241865	1332.70376	-0.066616	-2.966E-05	2.7704	0.0012335	2.7038	0.0012038	445.24333342378475	39.532	0.22947	39.479	39.3	39.53	-0.052731					7	5	2	0	0	0	0.17437	1	2425	2425		20.315	2.4819	1	26774			57999	2091	38754	38770	65761	65761					0.05072125280730688
TKLPDLPI	8	Unmodified	_TKLPDLPI_					0	0	0		ENSG00000185972|ENST00000335119|CCIN	ENSG00000185972|ENST00000335119|CCIN	ENSG00000185972|ENST00000335119|CCIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.7774963378906	2	448.776211	895.537869	-1.2107	-0.00054331	4.2721	0.0019172	3.0615	0.0013739	448.7780530522161	71.86	0.93866	71.94	71.575	72.514	0.080025					46	35	2	0	0	0	0.86288	1	6553	6553		26.796	0	1	128990			58000	7764	38755	38771	65762	65762					0.08592143562668753
TKLPPPFSC	9	Unmodified	_TKLPPPFSC_					0	0	0			REV__nc|ENSG00000076864|P47736-2|RAP1GAP	REV__nc|ENSG00000076864|P47736-2|RAP1GAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.26007080078125	2	495.259871	988.505189	1.1508	0.00056992	-0.80172	-0.00039706	0.34904	0.00017287	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.7932	1	2764	2764		26.693	2.4902	1	3842700	+		58001	29712	38756	38772	65763	65763					0.010476131681571133
TKLRLVEFSAF	11	Unmodified	_TKLRLVEFSAF_					0	0	0		nc|ENSG00000187079|P28347-2|TEAD1;ENSG00000187079|ENST00000527636|TEAD1	nc|ENSG00000187079|P28347-2|TEAD1	nc|ENSG00000187079|P28347-2|TEAD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26885986328125	3	437.587084	1309.73942	-0.051297	-2.2447E-05	4.1824	0.0018302	4.1311	0.0018077	437.58887825754573	50.719	0.6972	50.717	50.435	51.132	-0.0020447					54	22	3	0	0	0	0.17302	1	4321	4321		21.032	11.82	1	257270			58002	7837	38757	38773	65764	65764					0.09694207528355037
TKLRLVEFSAF	11	Unmodified	_TKLRLVEFSAF_					0	0	0		nc|ENSG00000187079|P28347-2|TEAD1;ENSG00000187079|ENST00000527636|TEAD1	nc|ENSG00000187079|P28347-2|TEAD1	nc|ENSG00000187079|P28347-2|TEAD1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2679748535156	3	437.587084	1309.73942	-0.49566	-0.00021689	4.4593	0.0019513	3.9636	0.0017344	437.58902373212425	50.839	0.53346	50.748	50.557	51.09	-0.091797					37	15	3	0	0	0	0.17368	1	4052	4052		28.577	8.9498	1	289440			58003	7837	38757	38773	65765	65765					0.09694207528355037
TKLRPDQPKQ	10	Unmodified	_TKLRPDQPKQ_					0	0	0			REV__ENSG00000204308|ENST00000375094|RNF5	REV__ENSG00000204308|ENST00000375094|RNF5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.2350158691406	3	404.234933	1209.68297	0.32179	0.00013008	0.34574	0.00013976	0.66753	0.00026984	404.2349641058868	22.759	0.71555	22.148	21.823	22.539	-0.6107					45	17	4	0	0	0	0.61115	1	964	964		49.466	4.8264	1	300260	+		58004	23480	38758	38774	65766	65766					0.08651579691695588
TKLSIKRFAM	10	Unmodified	_TKLSIKRFAM_					0	0	0			REV__ENSG00000164603|ENST00000297145|BMT2	REV__ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.85595703125	2	597.855001	1193.69545	-0.3553	-0.00021242	2.7776	0.0016606	2.4223	0.0014482	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.80179	4	9159	9159;9171;9196;9208		39.253	7.723	1	1224100	+		58005	21093	38759	38775	65767;65768;65769;65770	65767					0.10634899830392897
TKLSIKRFAM	10	Unmodified	_TKLSIKRFAM_					0	0	0			REV__ENSG00000164603|ENST00000297145|BMT2	REV__ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8565063476562	2	597.855001	1193.69545	-0.32365	-0.0001935	3.4242	0.0020472	3.1006	0.0018537	598.3588954923197	94.611	4.9065	94.611	93.622	98.528	0					293	115	3	0	0	0	0.67571	3	9290	9290;9440;9556		45.972	18.09	1	5706300	+		58006	21093	38759	38775	65771;65772;65773	65771					0.10634899830392897
TKLSIKRFAM	10	Unmodified	_TKLSIKRFAM_					0	0	0			REV__ENSG00000164603|ENST00000297145|BMT2	REV__ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8560180664062	2	597.855001	1193.69545	-0.56225	-0.00033615	2.6789	0.0016016	2.1167	0.0012655	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.70553	3	9564	9492;9564;9599		44.377	12.847	1	2042000	+		58007	21093	38759	38775	65774;65775;65776	65775					0.10634899830392897
TKLSIKRFAM	10	Unmodified	_TKLSIKRFAM_					0	0	0			REV__ENSG00000164603|ENST00000297145|BMT2	REV__ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8560791015625	2	597.855001	1193.69545	-0.56163	-0.00033577	2.7443	0.0016407	2.1826	0.0013049	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.67571	5	9738	9738;9808;9844;9892;9996		45.972	7.4938	1	6282800	+		58008	21093	38759	38775	65777;65778;65779;65780;65781	65777					0.10634899830392897
TKLSIKRFAM	10	Unmodified	_TKLSIKRFAM_					0	0	0			REV__ENSG00000164603|ENST00000297145|BMT2	REV__ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8556518554688	2	597.855001	1193.69545	2.1625	0.0012929	-0.16797	-0.00010042	1.9946	0.0011925	597.8546696490685	92.423	2.9286	92.359	90.439	93.367	-0.06414					206	70	4	0	0	0	0.77314	1	9866	9866		40.778	6.6056	1	2186000	+		58009	21093	38759	38775	65782	65782					0.10634899830392897
TKLSIKRFAM	10	Unmodified	_TKLSIKRFAM_					0	0	0			REV__ENSG00000164603|ENST00000297145|BMT2	REV__ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8557739257812	2	597.855001	1193.69545	-0.4308	-0.00025756	2.4858	0.0014861	2.055	0.0012286	597.8562580242035	92.27	2.7665	92.315	90.514	93.28	0.045448					217	66	5	0	0	0	0.64457	10	9716	9537;9548;9584;9654;9679;9692;9704;9716;9727;9765		47.657	9.8458	1	1998300	+		58010	21093	38759	38775	65783;65784;65785;65786;65787;65788;65789;65790;65791;65792	65790					0.10634899830392897
TKLSIKRFAM	10	Unmodified	_TKLSIKRFAM_					0	0	0			REV__ENSG00000164603|ENST00000297145|BMT2	REV__ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8561401367188	2	597.855001	1193.69545	-0.43134	-0.00025788	2.6383	0.0015773	2.207	0.0013195	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.82886	1	9964	9964		37.812	4.9991	1	6857100	+		58011	21093	38759	38775	65793	65793					0.10634899830392897
TKLSIKRFAM	10	Unmodified	_TKLSIKRFAM_					0	0	0			REV__ENSG00000164603|ENST00000297145|BMT2	REV__ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.85595703125	2	597.855001	1193.69545	0.93582	0.00055948	1.0876	0.00065025	2.0235	0.0012097	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.70553	4	9379	9282;9329;9379;9403		44.377	3.6345	1	2638300	+		58012	21093	38759	38775	65794;65795;65796;65797	65796					0.10634899830392897
TKLSIKRFAM	10	Unmodified	_TKLSIKRFAM_					0	0	0			REV__ENSG00000164603|ENST00000297145|BMT2	REV__ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.856201171875	2	597.855001	1193.69545	0.8216	0.0004912	1.2098	0.00072326	2.0314	0.0012145	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.86348	1	9303	9303		31.53	2.3598	1	2486400	+		58013	21093	38759	38775	65798	65798					0.10634899830392897
TKLSIKRFAM	10	Unmodified	_TKLSIKRFAM_					0	0	0			REV__ENSG00000164603|ENST00000297145|BMT2	REV__ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8555908203125	2	597.855001	1193.69545	-1.2963	-0.00077498	3.3616	0.0020097	2.0653	0.0012348	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.70553	1	9163	9163		44.377	5.6236	1	2401200	+		58014	21093	38759	38775	65799	65799					0.10634899830392897
TKLSIKRFAM	10	Unmodified	_TKLSIKRFAM_					0	0	0			REV__ENSG00000164603|ENST00000297145|BMT2	REV__ENSG00000164603|ENST00000297145|BMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8558349609375	2	597.855001	1193.69545	-1.2962	-0.00077492	3.8047	0.0022747	2.5086	0.0014998	598.3589924641743	94.317	5.5544	94.515	93.356	98.911	0.19827					368	130	4	0	0	0	0.8608	2	9450	9450;9484		34.173	2.6427	1	9481100	+		58015	21093	38759	38775	65800;65801	65800					0.10634899830392897
TKLSLHLLRL	10	Unmodified	_TKLSLHLLRL_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.390625	2	597.390065	1192.76558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.43	1	118.33	117.83	118.83	-0.10152								0	0	0	0.45132	1	14099	14099		13.454	2.5885	1		+		58016	18431	38760	38776	65802	65802					0.1769052149052186
TKLSLSRK	8	Unmodified	_TKLSLSRK_					0	0	0			REV__ENSG00000141750|ENST00000333461|STAC2	REV__ENSG00000141750|ENST00000333461|STAC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7973937988281	2	466.798009	931.581465	0.35994	0.00016802	-1.4055	-0.00065611	-1.0456	-0.00048809	466.79729216650486	19.702	2.2945	19.233	18.459	20.753	-0.46967					107	51	4	0	0	0	0.81184	1	546	546		19.997	0	1	2065900	+		58017	19708	38761	38777	65803	65803					0.11293753059806022
TKLSPTSH	8	Unmodified	_TKLSPTSH_					0	0	0			REV__ENSG00000173200|ENST00000464300|PARP15	REV__ENSG00000173200|ENST00000464300|PARP15	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7800598144531	2	435.737617	869.460681	-1.8839	-0.00082091	1.779	0.0007752	-0.1049	-4.5708E-05	435.7384116002908	39.842	0.59148	39.842	39.584	40.175	0					36	13	4	0	0	0	0.4196	1	2601	2601		24.203	0	1	197170	+		58018	21900	38762	38778	65804	65804					0.020729253463287023
TKLSPTSH	8	Unmodified	_TKLSPTSH_					0	0	0			REV__ENSG00000173200|ENST00000464300|PARP15	REV__ENSG00000173200|ENST00000464300|PARP15	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	435.737617	869.460681	0.18726	8.1595E-05	-0.18614	-8.1109E-05	0.0011154	4.8602E-07	435.7374683453782	39.826	0.55701	39.915	39.611	40.168	0.088375					29	13	3	0	0	0	0.4196	1	2453	2453		23.042	5.6775	1	338670	+		58019	21900	38762	38778	65805	65805					0.020729253463287023
TKLTALATLM	10	Unmodified	_TKLTALATLM_					0	0	0			REV__nc|ENSG00000197256|Q63ZY3-3|KANK2	REV__nc|ENSG00000197256|Q63ZY3-3|KANK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8167114257812	2	531.81501	1061.61547	1.0705	0.00056928	2.5512	0.0013568	3.6216	0.001926	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.86587	1	10575	10575		29.17	0.020503	1	4490200	+		58020	23212	38763	38779	65806	65806					0.0871241343654674
TKLTKRTP	8	Unmodified	_TKLTKRTP_					0	0	0			REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|92|2|sense	REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|92|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.79974365234375	2	472.798009	943.581465	-0.10687	-5.0526E-05	3.1758	0.0015015	3.069	0.001451	472.7993982105073	109.99	1.6197	109.93	109.64	111.26	-0.055084					84	64	2	0	0	0	0.85277	1	12064	12064		25.45	1.2474	1	431950	+		58021	29506	38764	38780	65807	65807					0.10741753059789971
TKLTKRTP	8	Unmodified	_TKLTKRTP_					0	0	0			REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|92|2|sense	REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|92|2|sense	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	472.798009	943.581465	-0.10687	-5.0526E-05	3.1758	0.0015015	3.069	0.001451	472.7993982105073	109.99	1.6197	109.93	109.64	111.26	-0.055084	-0.047275	0.0010197	NaN	25.45	84	64	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	431950	+		58022	29506	38764	38780							0.10741753059789971
TKLTKRTP	8	Unmodified	_TKLTKRTP_					0	0	0			REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|92|2|sense	REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|92|2|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	472.798009	943.581465	2.8037	0.0013256	0.43903	0.00020757	3.2427	0.0015331	472.79799977980207	109.99	1.4377	109.97	109.77	111.21	-0.027641	-0.01382	-0.0015682	NaN	25.45	86	48	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	370120	+		58023	29506	38764	38780							0.10741753059789971
TKLTKRTP	8	Unmodified	_TKLTKRTP_					0	0	0			REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|92|2|sense	REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|92|2|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	472.798009	943.581465	-0.053391	-2.5243E-05	3.0187	0.0014272	2.9653	0.001402	472.7992181543521	109.92	1.2293	109.95	109.81	111.04	0.033096	-0.030205	0.00087111	NaN	25.45	78	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	383410	+		58024	29506	38764	38780							0.10741753059789971
TKLTKRTP	8	Unmodified	_TKLTKRTP_					0	0	0			REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|92|2|sense	REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|92|2|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	472.798009	943.581465	4.7698	0.0022552	-1.446	-0.00068368	3.3238	0.0015715	472.79707310923584	110	0.58698	110.07	109.9	110.49	0.068001	0.091301	-0.0033507	NaN	25.45	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	334860	+		58025	29506	38764	38780							0.10741753059789971
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.263427734375	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.90089	1	2102	2102		39.253	2.0937	1	3507500	+		58026	23822	38765	38781	65808	65808					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2628173828125	2	438.263468	874.512382	-1.8646	-0.00081717	1.0768	0.00047194	-0.78773	-0.00034523	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.8621	2	2792	2735;2792		31.53	2.4902	1	3384400	+		58027	23822	38765	38781	65809;65810	65810					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2632141113281	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.88601	1	2556	2556		34.173	6.2903	1	3673500	+		58028	23822	38765	38781	65811	65811					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2633361816406	2	438.263468	874.512382	0.23628	0.00010355	-0.99132	-0.00043446	-0.75504	-0.00033091	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.89291	2	3085	3061;3085		39.253	5.0803	1	5350400	+		58029	23822	38765	38781	65812;65813	65813					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2631530761719	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.90089	3	2720	2530;2566;2720		52.937	13.684	1	2862500	+		58030	23822	38765	38781	65814;65815;65816	65816					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2630310058594	2	438.263468	874.512382	-1.2142	-0.00053214	0.66524	0.00029155	-0.54896	-0.00024059	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.87071	2	3229	3182;3229		47.657	5.2612	1	4828000	+		58031	23822	38765	38781	65817;65818	65818					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633972167969	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.81485	4	2513	2478;2502;2513;2561		62.107	10.772	1	2361100	+		58032	23822	38765	38781	65819;65820;65821;65822	65821					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26300048828125	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.91546	1	3144	3144		44.377	1.981	1	4268300	+		58033	23822	38765	38781	65823	65823					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2635192871094	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.87071	4	1894	1864;1894;1924;1943		44.377	6.4404	1	11160000	+		58034	23822	38765	38781	65824;65825;65826;65827	65825					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2627868652344	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.87071	2	2568	2568;2578		52.937	10.541	1	22924000	+		58035	23822	38765	38781	65828;65829	65828					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.263427734375	2	438.263468	874.512382	0.15263	6.689E-05	-0.38156	-0.00016722	-0.22893	-0.00010033	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.87792	6	1914	1867;1887;1897;1905;1914;1944		52.937	12.159	1	11370000	+		58036	23822	38765	38781	65830;65831;65832;65833;65834;65835	65834					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2625732421875	2	438.263468	874.512382	0.19585	8.5835E-05	-1.6052	-0.00070351	-1.4094	-0.00061768	438.26281081501594	40.164	4.5215	40.246	39.962	44.483	0.081345					325	127	5	0	0	0	0.89291	2	2649	2566;2649		44.377	3.6343	1	22029000	+		58037	23822	38765	38781	65836;65837	65837					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26324462890625	2	438.263468	874.512382	0.037237	1.632E-05	-0.30418	-0.00013331	-0.26694	-0.00011699	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.81485	7	1888	1858;1867;1888;1910;1953;1963;1994		62.107	12.083	1	10667000	+		58038	23822	38765	38781	65838;65839;65840;65841;65842;65843;65844	65840					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2627258300781	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.89291	4	2538	2538;2556;2590;2622		47.657	7.2972	1	21381000	+		58039	23822	38765	38781	65845;65846;65847;65848	65845					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2635803222656	2	438.263468	874.512382	0.27759	0.00012166	-1.0434	-0.00045727	-0.76577	-0.00033561	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.91546	2	2605	2605;2617		52.937	10.541	1	85249000	+		58040	23822	38765	38781	65849;65850	65849					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2615661621094	2	438.263468	874.512382	-2.4769	-0.0010856	0.22797	9.991E-05	-2.249	-0.00098564	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.90089	4	3505	3469;3493;3505;3565		44.377	7.2181	1	246320000	+		58041	23822	38765	38781	65851;65852;65853;65854	65853					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2635192871094	2	438.263468	874.512382	1.5783	0.00069171	-2.4144	-0.0010581	-0.83609	-0.00036643	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.89291	3	2737	2689;2713;2737		39.253	7.2972	1	92475000	+		58042	23822	38765	38781	65855;65856;65857	65857					0.07010669040232642
TKLTSVQV	8	Unmodified	_TKLTSVQV_					0	0	0			REV__nc|ENSG00000241685|Q92747-2|ARPC1A	REV__nc|ENSG00000241685|Q92747-2|ARPC1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2626037597656	2	438.263468	874.512382	-1.2747	-0.00055866	-0.66852	-0.00029299	-1.9432	-0.00085165	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.90089	6	3553	3493;3505;3529;3553;3662;3674		47.657	12.039	1	219150000	+		58043	23822	38765	38781	65858;65859;65860;65861;65862;65863	65861					0.07010669040232642
TKLVFATL	8	Unmodified	_TKLVFATL_					0	0	0			REV__ENSG00000175899|ENST00000318602|A2M;REV__nc|ENSG00000126838|P20742-2|PZP	REV__ENSG00000175899|ENST00000318602|A2M	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	446.25982666015625	2	446.778754	891.542954	0.0019129	8.5466E-07	-4.3994	-0.0019656	-4.3975	-0.0019647	446.7767941077371	34.386	0.65912	34.596	34.319	34.978	0.21002					24	15	2	0	0	0	0.4196	1	2599	2599		16.473	0	1	133740	+		58044	22090;18715	38766	38782	65864	65864					0.0928444742528427
TKLVFATL	8	Unmodified	_TKLVFATL_					0	0	0			REV__ENSG00000175899|ENST00000318602|A2M;REV__nc|ENSG00000126838|P20742-2|PZP	REV__ENSG00000175899|ENST00000318602|A2M	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	446.778754	891.542954	1.2868	0.0005749	-6.244	-0.0027897	-4.9573	-0.0022148	446.77582831690336	34.401	0.41067	34.706	34.406	34.817	0.30494	0.055118	-0.0012865	NaN	10.866	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178360	+		58045	22090;18715	38766	38782							0.0928444742528427
TKLVPSTDLEP	11	Unmodified	_TKLVPSTDLEP_					0	0	0		ENSG00000154175|ENST00000471714|ABI3BP	ENSG00000154175|ENST00000471714|ABI3BP	ENSG00000154175|ENST00000471714|ABI3BP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.55450439453125	3	400.555449	1198.64452	0.91161	0.00036515	-1.5886	-0.0006363	-0.67694	-0.00027115	400.55469622635616	16.588	0.18688	16.666	16.564	16.751	0.07715					10	5	3	0	0	0	0.69687	1	115	115		32.034	3.9526	1	31101			58046	5260	38767	38783	65865	65865					0.05314229266514303
TKLWKGSRKL	10	Unmodified	_TKLWKGSRKL_					0	0	0			REV__nc|ENSG00000204172|Q5VTM2|AGAP9;REV__nc|ENSG00000264204|Q5VUJ5|AGAP7P	REV__nc|ENSG00000204172|Q5VTM2|AGAP9	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2563171386719	3	406.255669	1215.74518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.993	1	54.944	54.444	55.444	-0.049271								0	0	0	0.45132	1	4584	4584		9.6461	0	1		+		58047	30158;30254	38768	38784	65866	65866					0.14593350830705276
TKLWLHKA	8	Unmodified	_TKLWLHKA_					0	0	0			REV__ENST00000399438.7_2_5:64960114-64960377:+|nuORF	REV__ENST00000399438.7_2_5:64960114-64960377:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.8034973144531	2	498.803094	995.591636	-0.60409	-0.00030132	1.8273	0.00091145	1.2232	0.00061013	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.82658	1	4216	4216		21.96	2.5999	1	2424700	+		58048	26225	38769	38785	65867	65867					0.09366360785031702
TKLYLAKQVFV	11	Unmodified	_TKLYLAKQVFV_					0	0	0		ENSG00000023839|ENST00000647814|ABCC2	ENSG00000023839|ENST00000647814|ABCC2	ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26776123046875	3	437.267463	1308.78056	-1.6775	-0.00073351	2.509	0.0010971	0.83146	0.00036357	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.78683	1	4525	4525		14.086	0.57807	1	2305800			58049	862	38770	38786	65868	65868					0.13851968567814765
TKLYLAKQVFV	11	Unmodified	_TKLYLAKQVFV_					0	0	0		ENSG00000023839|ENST00000647814|ABCC2	ENSG00000023839|ENST00000647814|ABCC2	ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2676086425781	3	437.267463	1308.78056	0.29718	0.00012995	0.67877	0.0002968	0.97595	0.00042675	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.72892	1	4234	4234		26.75	7.487	1	4533800			58050	862	38770	38786	65869	65869					0.13851968567814765
TKMGSLKH	8	Unmodified	_TKMGSLKH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000018574	REV__CON__ENSEMBL:ENSBTAP00000018574	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.24468994140625	2	451.249837	900.485122	-1.2821	-0.00057856	-1.1197	-0.00050528	-2.4019	-0.0010838	451.2491871267672	67.547	1.2746	67.683	67.257	68.531	0.13522					88	48	2	0	0	0	0.87479	1	6088	6088		30.504	8.5438	1	186190	+	+	58051	15961	38771	38787	65870	65870					0.030898622281938515
TKMLALITKEF	11	Unmodified	_TKMLALITKEF_					0	0	0			REV__nc|ENSG00000122359|P50995-2|ANXA11	REV__nc|ENSG00000122359|P50995-2|ANXA11	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.21435546875	3	432.252825	1293.73665	0.013203	5.7069E-06	4.2347	0.0018305	4.2479	0.0018362	432.254597872722	17.469	0.20101	17.532	17.422	17.623	0.062603					17	10	2	0	0	0	0.17504	1	251	251		25.068	15.323	1	108600	+		58052	18489	38772	38788	65871	65871					0.10152616079199106
TKMLFVLVVVF	11	Unmodified	_TKMLFVLVVVF_					0	0	0		ENSG00000171596|ENST00000305141|NMUR1	ENSG00000171596|ENST00000305141|NMUR1	ENSG00000171596|ENST00000305141|NMUR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3955078125	2	648.393428	1294.7723	-1.1411	-0.00073988	-0.51234	-0.0003322	-1.6534	-0.0010721	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.73893	1	12468	12468		24.519	11.707	1	2297700			58053	6686	38773	38789	65872	65872					0.13670698326859565
TKMNKKKKK	9	Unmodified	_TKMNKKKKK_					0	0	0			REV__ENSG00000122299.12,ZC3H7A,chr16,-,I4.1,11782553,11782863|11|10.89|1|intron	REV__ENSG00000122299.12,ZC3H7A,chr16,-,I4.1,11782553,11782863|11|10.89|1|intron	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3638916015625	2	567.362993	1132.71143	0.15466	8.7749E-05	0.93327	0.0005295	1.0879	0.00061725	567.3633604070975	44.371	2.0253	44.313	43.6	45.625	-0.058262					150	49	4	0	0	0	0.7932	1	3156	3156		20.947	3.582	1	1937600	+		58054	18487	38774	38790	65873	65873					0.1503860606728722
TKMRKALF	8	Unmodified	_TKMRKALF_					0	0	0			REV__ENST00000310396.9_1_7:120628925-120629484:+|nuORF	REV__ENST00000310396.9_1_7:120628925-120629484:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.79534912109375	2	497.796955	993.579357	-1.2593	-0.00062688	-0.71711	-0.00035698	-1.9764	-0.00098385	497.79616758279207	48.708	1.9058	48.709	47.99	49.896	0.00017166					121	43	4	0	0	0	0.8347	1	4145	4145		23.042	0	1	500820	+		58055	24885	38775	38791	65874	65874					0.08231001050342002
TKMVSAVL	8	Unmodified	_TKMVSAVL_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.7503662109375	2	424.749139	847.483725	0.12997	5.5206E-05	2.5285	0.001074	2.6585	0.0011292	424.7500871713905	40.264	0.96405	40.233	39.693	40.657	-0.030991					53	25	3	0	0	0	0.81548	1	2854	2854		20.482	1.1219	1	826790			58056	8866	38776	38792	65875	65875					0.05388228139452167
TKNAQRAL	8	Unmodified	_TKNAQRAL_					0	0	0		nc|nan|Q96LS8|C2orf48	nc|nan|Q96LS8|C2orf48	nc|nan|Q96LS8|C2orf48	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.2744445800781	2	451.264333	900.514114	0.54587	0.00024633	-1.7672	-0.00079749	-1.2214	-0.00055116	451.26365307716065	77.533	1.0608	77.67	77.249	78.31	0.1366					71	42	3	0	0	0	0.89494	1	7310	7310		37.159	2.9866	1	70049			58057	15375	38777	38793	65876	65876					0.05987722848840349
TKNGKTIL	8	Unmodified	_TKNGKTIL_					0	0	0		ENSG00000132631|ENST00000377428|SCP2D1	ENSG00000132631|ENST00000377428|SCP2D1	ENSG00000132631|ENST00000377428|SCP2D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.7705078125	2	437.77146	873.528367	0.12527	5.4839E-05	0.10949	4.7934E-05	0.23476	0.00010277	437.7713647777616	39.778	1.1866	39.748	39.114	40.301	-0.03027					48	28	2	0	0	0	0.8537	1	2810	2810		25.574	2.5316	1	73178			58058	3812	38778	38794	65877	65877					0.08654375277149029
TKNGKTIL	8	Unmodified	_TKNGKTIL_					0	0	0		ENSG00000132631|ENST00000377428|SCP2D1	ENSG00000132631|ENST00000377428|SCP2D1	ENSG00000132631|ENST00000377428|SCP2D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7715759277344	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.80959	1	2325	2325		15.642	1.5047	1	1041500			58059	3812	38778	38794	65878	65878					0.08654375277149029
TKNIQFAH	8	Unmodified	_TKNIQFAH_					0	0	0		ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA	ENSG00000011007|ENST00000613537|ELOA	ENSG00000011007|ENST00000613537|ELOA	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.5705871582031	2	479.758884	957.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.181	1	67.181	66.681	67.681	0								0	0	0	0.29452	1	5938	5938		33.516	1.5607	1				58060	776	38779	38795	65879	65879					0.02276320474561544
TKNLEQRY	8	Unmodified	_TKNLEQRY_					0	0	0			REV__nc|ENSG00000112062|Q16539-2|MAPK14	REV__nc|ENSG00000112062|Q16539-2|MAPK14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.258056640625	2	526.28018	1050.54581	0.62274	0.00032773	-4.407	-0.0023193	-3.7843	-0.0019916	526.2775363255467	51.189	0.66665	51.624	51.409	52.075	0.43505					27	15	2	0	0	0	0.4196	1	5065	5065		26.693	4.1133	1	373550	+		58061	17912	38780	38796	65880	65880					0.022556708121328484
TKNLLPATLQL	11	Unmodified	_TKNLLPATLQL_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;ENST00000419533.1_1_1:19477984-19504233:-|nuORF	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.369873046875	2	606.371538	1210.72852	-1.2685	-0.00076921	-2.0387	-0.0012362	-3.3072	-0.0020054	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.7144	1	9505	9505		29.17	1.0886	1	823240			58062	3499	38781	38797	65881	65881					0.13158805154080255
TKNPNPKV	8	Unmodified	_TKNPNPKV_					0	0	0			REV__ENSG00000198650|ENST00000355962|TAT	REV__ENSG00000198650|ENST00000355962|TAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2591552734375	2	449.261259	896.507966	0.47902	0.00021521	-2.0825	-0.00093559	-1.6035	-0.00072038	449.2601268412696	70.509	0.67209	70.638	70.305	70.977	0.12965					54	34	2	0	0	0	0.88601	1	6391	6391		34.173	1.3601	1	260720	+		58063	23352	38782	38798	65882	65882					0.05557204617332445
TKNVRQTK	8	Unmodified	_TKNVRQTK_					0	0	0			REV__ENSG00000156011|ENST00000327040|PSD3	REV__ENSG00000156011|ENST00000327040|PSD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906188964844	2	487.790715	973.566878	-0.085473	-4.1693E-05	-0.089202	-4.3512E-05	-0.17467	-8.5205E-05	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.8621	1	8227	8227		26.693	1.1189	1	1889700	+		58064	20462	38783	38799	65883	65883					0.07903680911658739
TKPAILKP	8	Unmodified	_TKPAILKP_					0	0	0		ENSG00000181378|ENST00000341552|CFAP65;nc|ENSG00000181378|Q6ZU64-4|CFAP65;nc|ENSG00000181378|Q6ZU64-5|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7799072265625	2	434.286746	866.558939	-0.95387	-0.00041425	3.1468	0.0013666	2.193	0.00095237	434.2881216537896	45.863	1.3779	45.834	45.019	46.397	-0.028782					51	31	2	0	0	0	0.4196	1	3682	3682		17.365	4.4058	1	154690			58065	7383	38784	38800	65884	65884					0.12032153662187284
TKPAILKP	8	Unmodified	_TKPAILKP_					0	0	0		ENSG00000181378|ENST00000341552|CFAP65;nc|ENSG00000181378|Q6ZU64-4|CFAP65;nc|ENSG00000181378|Q6ZU64-5|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7822570800781	2	434.286746	866.558939	-1.1565	-0.00050225	3.2916	0.0014295	2.1351	0.00092727	434.28820121228205	40.489	0.47267	41.078	40.874	41.346	0.58915					17	13	2	0	0	0	0.4196	1	3475	3475		31.955	5.1588	1	344520			58066	7383	38784	38800	65885	65885					0.12032153662187284
TKPAPVKFAS	10	Unmodified	_TKPAPVKFAS_					0	0	0			REV__ENSG00000163539|ENST00000682230|CLASP2	REV__ENSG00000163539|ENST00000682230|CLASP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3043823242188	2	523.305667	1044.59678	-0.83281	-0.00043582	-3.2133	-0.0016815	-4.0461	-0.0021173	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.86698	1	8145	8145		28.081	0.19925	1	2778600	+		58067	20931	38785	38801	65886	65886					0.0762661985700106
TKPAPVKFAS	10	Unmodified	_TKPAPVKFAS_					0	0	0			REV__ENSG00000163539|ENST00000682230|CLASP2	REV__ENSG00000163539|ENST00000682230|CLASP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3032836914062	2	523.305667	1044.59678	-0.041393	-2.1661E-05	-4.0495	-0.0021191	-4.0909	-0.0021408	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.69342	2	8698	8698;8721		45.022	8.5284	1	3850300	+		58068	20931	38785	38801	65887;65888	65887					0.0762661985700106
TKPAPVKFAS	10	Unmodified	_TKPAPVKFAS_					0	0	0			REV__ENSG00000163539|ENST00000682230|CLASP2	REV__ENSG00000163539|ENST00000682230|CLASP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3035888671875	2	523.305667	1044.59678	-0.041134	-2.1526E-05	-3.7481	-0.0019614	-3.7892	-0.0019829	523.30361738985	91.645	2.4487	91.714	91.431	93.88	0.06987					99	57	2	0	0	0	0.73395	1	9462	9462		42.864	2.0861	1	1067500	+		58069	20931	38785	38801	65889	65889					0.0762661985700106
TKPAPVKFAS	10	Unmodified	_TKPAPVKFAS_					0	0	0			REV__ENSG00000163539|ENST00000682230|CLASP2	REV__ENSG00000163539|ENST00000682230|CLASP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3043823242188	2	523.305667	1044.59678	-0.178	-9.3149E-05	-4.0857	-0.0021381	-4.2637	-0.0022312	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.73395	1	8370	8370		42.864	6.4175	1	4158500	+		58070	20931	38785	38801	65890	65890					0.0762661985700106
TKPAPVKFAS	10	Unmodified	_TKPAPVKFAS_					0	0	0			REV__ENSG00000163539|ENST00000682230|CLASP2	REV__ENSG00000163539|ENST00000682230|CLASP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3054809570312	2	523.305667	1044.59678	-1.4863	-0.0007778	-2.6443	-0.0013838	-4.1306	-0.0021616	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.8505	1	8262	8262		19.104	0.84144	1	3566700	+		58071	20931	38785	38801	65891	65891					0.0762661985700106
TKPARAGPF	9	Unmodified	_TKPARAGPF_					0	0	0		nc|ENSG00000164270|Q13639-8|HTR4	nc|ENSG00000164270|Q13639-8|HTR4	nc|ENSG00000164270|Q13639-8|HTR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7674865722656	2	472.769252	943.52395	-0.93003	-0.00043969	-3.4036	-0.0016091	-4.3336	-0.0020488	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.78536	1	8246	8246		29.15	2.3535	1	526610			58072	15056	38786	38802	65892	65892					0.04992910854230104
TKPFGPKV	8	Unmodified	_TKPFGPKV_					0	0	0			REV__ENSG00000077984|ENST00000480798|CST7	REV__ENSG00000077984|ENST00000480798|CST7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2760925292969	2	437.263271	872.511988	1.7093	0.00074743	3.6471	0.0015947	5.3564	0.0023422	437.26475798523666	28.231	1.0257	28.207	27.911	28.936	-0.023556					31	25	2	0	0	0	0.4196	1	1310	1310		21.96	7.2958	1	18655	+		58073	16756	38787	38803	65893	65893					0.07063294111037521
TKPFGPKV	8	Unmodified	_TKPFGPKV_					0	0	0			REV__ENSG00000077984|ENST00000480798|CST7	REV__ENSG00000077984|ENST00000480798|CST7	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	437.263271	872.511988	-1.6194	-0.00070811	8.097	0.0035405	6.4776	0.0028324	437.26727212765707	27.855	0.11553	27.924	27.833	27.948	0.068678	-0.14152	0.0034358	NaN	21.96	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23344	+		58074	16756	38787	38803							0.07063294111037521
TKPFMLPPLSK	11	Unmodified	_TKPFMLPPLSK_					0	0	0			REV__chr6:47284392-47285944|17|19.29|0.9|4.42|-|0|None,TNFRSF21|1	REV__chr6:47284392-47285944|17|19.29|0.9|4.42|-|0|None,TNFRSF21|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2803955078125	3	420.245782	1257.71552	0.24076	0.00010118	3.5508	0.0014922	3.7915	0.0015934	420.24726060491884	46.048	0.47566	46.091	45.855	46.33	0.042595					17	13	2	0	0	0	0.73647	1	3374	3374		25.068	0.83596	1	89428	+		58075	15882	38788	38804	65894	65894					0.09696650770342785
TKPIKFPATT	10	Unmodified	_TKPIKFPATT_					0	0	0			REV__ENSG00000083290|ENST00000395544|ULK2	REV__ENSG00000083290|ENST00000395544|ULK2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.3060913085938	2	552.326599	1102.63865	-1.4446	-0.00079791	-3.2293	-0.0017836	-4.6739	-0.0025815	552.3249119633183	93.848	0.59938	94.046	93.482	94.082	0.19827					16	13	2	0	0	0	0.37624	1	9433	9433		29.17	10.067	1	74739	+		58076	16850	38789	38805	65895	65895					0.09143175545523263
TKPIKHTIII	10	Unmodified	_TKPIKHTIII_					0	0	0		nc|ENSG00000128591|Q14315-2|FLNC;ENSG00000128591|ENST00000325888|FLNC	nc|ENSG00000128591|Q14315-2|FLNC	nc|ENSG00000128591|Q14315-2|FLNC	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3533935546875	2	582.379166	1162.74378	0.88306	0.00051427	1.0131	0.00058999	1.8961	0.0011043	582.8835007473504	103.66	0.45008	103.78	103.66	104.11	0.1211					17	10	2	0	0	0	0.37624	1	10990	10990		23.523	0	1	180510			58077	3549	38790	38806	65896	65896					0.16891716741952223
TKPIKTMF	8	Unmodified	_TKPIKTMF_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|22|1|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|22|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.2779541015625	2	483.278063	964.541574	-1.6694	-0.0008068	3.0755	0.0014863	1.4061	0.00067953	483.27961083626826	95.088	2.1013	95.291	94.82	96.921	0.20242					117	49	4	0	0	0	0.86288	1	9785	9785		26.796	2.2921	1	1301000	+		58078	29550	38791	38807	65897	65897					0.05788490064878715
TKPKLAPL	8	Unmodified	_TKPKLAPL_					0	0	0		ENST00000495864.5_1_3:45874526-45875807:-|nuORF;ENST00000480156.5_1_3:45874526-45883504:-|nuORF;nc|ENSG00000163818|Q9NQ48-3|LZTFL1;nc|ENSG00000163818|Q9NQ48-2|LZTFL1;ENSG00000163818|ENST00000296135|LZTFL1	ENST00000495864.5_1_3:45874526-45875807:-|nuORF	ENST00000495864.5_1_3:45874526-45875807:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7797546386719	2	434.286746	866.558939	-1.6437	-0.00071382	4.1082	0.0017841	2.4646	0.0010703	434.28853835526013	45.729	1.8716	45.744	44.989	46.86	0.015514					69	50	2	0	0	0	0.4196	1	3341	3341		16.473	0	1	207600			58079	5870	38792	38808	65898	65898					0.12032153662153178
TKPKLPAQAV	10	Unmodified	_TKPKLPAQAV_					0	0	0			REV__nc|ENSG00000149480|O94776-2|MTA2	REV__nc|ENSG00000149480|O94776-2|MTA2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.8278198242188	2	526.826766	1051.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.618	1	71.694	71.194	72.194	0.076225								0	0	0	0.45132	1	6504	6504		27.882	3.6795	1		+		58080	20171	38793	38809	65899	65899					0.11522595265341806
TKPLLLDL	8	Unmodified	_TKPLLLDL_					0	0	0		ENST00000454784.8_2_12:40953042-40955390:+|nuORF	ENST00000454784.8_2_12:40953042-40955390:+|nuORF	ENST00000454784.8_2_12:40953042-40955390:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7918395996094	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.80308	1	4040	4040		16.473	0.83134	1	186860			58081	11945	38794	38810	65900	65900					0.10984716596760791
TKPPDLKKVK	10	Unmodified	_TKPPDLKKVK_					0	0	0			REV__ENST00000415664.2_21:10987833-11013471:-|nuORF	REV__ENST00000415664.2_21:10987833-11013471:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3666381835938	2	577.368798	1152.72304	-1.363	-0.00078696	-2.7149	-0.0015675	-4.0779	-0.0023544	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.86218	1	10741	10741		32.812	1.2826	1	14386000	+		58082	26422	38795	38811	65901	65901					0.15279126362247553
TKPPVRKVTIL	11	Unmodified	_TKPPVRKVTIL_					0	0	0		ENST00000481915.5_1_3:32574447-32611850:-|nuORF	ENST00000481915.5_1_3:32574447-32611850:-|nuORF	ENST00000481915.5_1_3:32574447-32611850:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3794555664062	2	626.410998	1250.80744	0.92577	0.00057991	4.27	0.0026748	5.1958	0.0032547	626.4132248704386	105.15	0.12369	105.25	105.15	105.28	0.10766					4	2	2	0	0	0	0.17925	1	11188	11188		22.58	0	1	42695			58083	12476	38796	38812	65902	65902					0.19207077179044063
TKPQLLLLLVP	11	Unmodified	_TKPQLLLLLVP_					0	0	0			REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7663879394531	3	412.275958	1233.80605	-1.8882	-0.00077844	-4.4645	-0.0018406	-6.3527	-0.002619	412.27419064047234	39.47	1.2225	39.47	38.982	40.205	0					50	29	2	0	0	0	0.17729	1	2627	2627		23.378	15.978	1	81148	+		58084	19729	38797	38813	65903	65903					0.19849443090288332
TKPQRLDTG	9	Unmodified	_TKPQRLDTG_					0	0	0		ENSG00000145642|ENST00000389074|SHISAL2B	ENSG00000145642|ENST00000389074|SHISAL2B	ENSG00000145642|ENST00000389074|SHISAL2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.27996826171875	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.76419	1	8547	8547		35.152	3.5178	1	1261800			58085	4781	38798	38814	65904	65904					0.03911670812124157
TKPQRLDTG	9	Unmodified	_TKPQRLDTG_					0	0	0		ENSG00000145642|ENST00000389074|SHISAL2B	ENSG00000145642|ENST00000389074|SHISAL2B	ENSG00000145642|ENST00000389074|SHISAL2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.2799072265625	2	508.28018	1014.54581	-0.39653	-0.00020155	0.29161	0.00014822	-0.10492	-5.3328E-05	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.64555	1	8892	8892		44.377	5.1244	1	2080300			58086	4781	38798	38814	65905	65905					0.03911670812124157
TKPRKKFF	8	Unmodified	_TKPRKKFF_					0	0	0			REV__nc|ENSG00000040341|Q9NUL3-4|STAU2	REV__nc|ENSG00000040341|Q9NUL3-4|STAU2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3216552734375	2	526.324194	1050.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.199	1	59.233	58.733	59.733	0.033905								0	0	0	0.29498	1	5458	5458		26.796	5.8492	1		+		58087	16316	38799	38815	65906	65906					0.11054336193410563
TKPRKKFF	8	Unmodified	_TKPRKKFF_					0	0	0			REV__nc|ENSG00000040341|Q9NUL3-4|STAU2	REV__nc|ENSG00000040341|Q9NUL3-4|STAU2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3237915039062	2	526.324194	1050.63383	0.4429	0.00023311	0.69495	0.00036577	1.1378	0.00059888	526.3244429703017	58.009	1.7686	58.119	57.259	59.028	0.11027					159	84	2	0	0	0	0.86288	1	5003	5003		26.796	7.4361	1	230600	+		58088	16316	38799	38815	65907	65907					0.11054336193410563
TKPRLNASA	9	Unmodified	_TKPRLNASA_					0	0	0			REV__ENSG00000077235|ENST00000356183|GTF3C1	REV__ENSG00000077235|ENST00000356183|GTF3C1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27734375	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.77244	1	8034	8034		32.812	0.85756	1	1802300	+		58089	16739	38800	38816	65908	65908					0.06031992020302823
TKPRLNASA	9	Unmodified	_TKPRLNASA_					0	0	0			REV__ENSG00000077235|ENST00000356183|GTF3C1	REV__ENSG00000077235|ENST00000356183|GTF3C1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2774963378906	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.76419	1	9965	9965		35.152	1.2304	1	6350300	+		58090	16739	38800	38816	65909	65909					0.06031992020302823
TKPRQKRGY	9	Unmodified	_TKPRQKRGY_					0	0	0			REV__ENST00000505973.1_1_2:27805995-27824299:+|nuORF	REV__ENST00000505973.1_1_2:27805995-27824299:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3294067382812	2	567.330539	1132.64652	-1.2006	-0.00068114	-0.16538	-9.3826E-05	-1.366	-0.00077496	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.7932	1	9657	9657		26.693	1.1189	1	15673000	+		58091	23845	38801	38817	65910	65910					0.0855074758567298
TKPRQKRGY	9	Unmodified	_TKPRQKRGY_					0	0	0			REV__ENST00000505973.1_1_2:27805995-27824299:+|nuORF	REV__ENST00000505973.1_1_2:27805995-27824299:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3297119140625	2	567.330539	1132.64652	2.9351	0.0016651	-3.9677	-0.002251	-1.0327	-0.00058588	567.3281367260898	114.07	0.9398	114.04	113.65	114.59	-0.024452					66	32	3	0	0	0	0.76764	1	12631	12631		34.173	2.6427	1	557170	+		58092	23845	38801	38817	65911	65911					0.0855074758567298
TKPRQKRGY	9	Unmodified	_TKPRQKRGY_					0	0	0			REV__ENST00000505973.1_1_2:27805995-27824299:+|nuORF	REV__ENST00000505973.1_1_2:27805995-27824299:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3300170898438	2	567.330539	1132.64652	1.497	0.00084932	-2.8559	-0.0016202	-1.3589	-0.00077092	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.7932	1	9552	9552		25.574	0.12388	1	15259000	+		58093	23845	38801	38817	65912	65912					0.0855074758567298
TKPRQKRGY	9	Unmodified	_TKPRQKRGY_					0	0	0			REV__ENST00000505973.1_1_2:27805995-27824299:+|nuORF	REV__ENST00000505973.1_1_2:27805995-27824299:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.32958984375	2	567.330539	1132.64652	0.27026	0.00015333	-1.2412	-0.00070419	-0.97098	-0.00055087	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.77244	1	11182	11182		32.812	5.7651	1	6007000	+		58094	23845	38801	38817	65913	65913					0.0855074758567298
TKPRQQLSV	9	Unmodified	_TKPRQQLSV_					0	0	0		ENST00000597145.5_1_19:4683234-4684926:-|nuORF	ENST00000597145.5_1_19:4683234-4684926:-|nuORF	ENST00000597145.5_1_19:4683234-4684926:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.3281860351562	2	528.811648	1055.60874	0.33973	0.00017965	1.6686	0.00088238	2.0083	0.001062	528.8140621064447	46.179	1.4392	46.221	45.638	47.077	0.041927					56	39	2	0	0	0	0.20789	1	3419	3419		25.574	0	1	159880			58095	14346	38802	38818	65914	65914					0.08316236600171578
TKPSAPAGAL	10	Unmodified	_TKPSAPAGAL_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2;nc|ENSG00000166833|Q8IVL1-4|NAV2;ENSG00000166833|ENST00000349880|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1-5|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3009338378906	2	456.761092	911.507631	-0.73134	-0.00033405	0.48363	0.00022091	-0.24771	-0.00011314	456.7612288360315	35.109	0.7805	35.116	34.83	35.611	0.0063934					30	18	2	0	0	0	0.37624	1	2192	2192		37.812	4.9991	1	69277			58096	15072	38803	38819	65915	65915					0.04833784897471105
TKPSIPLL	8	Unmodified	_TKPSIPLL_					0	0	0		ENSG00000076258|ENST00000367749|FMO4	ENSG00000076258|ENST00000367749|FMO4	ENSG00000076258|ENST00000367749|FMO4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2524108886719	2	434.778754	867.542954	0.56406	0.00024524	2.1549	0.00093691	2.719	0.0011822	434.77975551163473	81.613	1.7631	81.756	80.907	82.67	0.14352					54	40	2	0	0	0	0.4196	1	7951	7951		20.947	0	1	64909			58097	1354	38804	38820	65916	65916					0.10388447425293634
TKPSKVTLYI	10	Unmodified	_TKPSKVTLYI_					0	0	0		ENST00000429515.1_1_2:139036249-139036405:+|nuORF	ENST00000429515.1_1_2:139036249-139036405:+|nuORF	ENST00000429515.1_1_2:139036249-139036405:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.3450927734375	2	575.347532	1148.68051	0.94019	0.00054093	-3.6496	-0.0020998	-2.7094	-0.0015588	575.3454322863764	98.249	1.7248	98.634	98.18	99.904	0.38548					107	42	5	0	0	0	0.86698	1	11802	11802		28.081	3.8787	1	3140900			58098	11610	38805	38821	65917	65917					0.11211731234061517
TKPSVDLV	8	Unmodified	_TKPSVDLV_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.74920654296875	2	429.750193	857.485833	-0.15763	-6.7743E-05	-0.95449	-0.00041019	-1.1121	-0.00047794	429.7496181624476	40.277	2.7409	40.229	39.975	42.716	-0.04789					188	88	4	0	0	0	0.92457	1	2553	2553		47.916	5.5195	1	4300300	+		58099	16368	38806	38822	65918	65918					0.051389801488994635
TKPSVDLV	8	Unmodified	_TKPSVDLV_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7506408691406	2	429.750193	857.485833	0.60427	0.00025969	0.37111	0.00015949	0.97539	0.00041917	429.75036736011566	34.927	1.9228	35.138	34.854	36.777	0.21003					152	48	4	0	0	0	0.90523	1	2708	2708		40.778	5.1599	1	5113100	+		58100	16368	38806	38822	65919	65919					0.051389801488994635
TKPSVDLV	8	Unmodified	_TKPSVDLV_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	429.7505187988281	2	429.750193	857.485833	1.5892	0.00068294	-0.58551	-0.00025162	1.0037	0.00043132	429.74995933180253	34.855	1.9588	35.237	34.934	36.893	0.3812					144	49	4	0	0	0	0.89962	2	2767	2635;2767		40.778	1.5253	1	5947200	+		58101	16368	38806	38822	65920;65921	65921					0.051389801488994635
TKPTLLVP	8	Unmodified	_TKPTLLVP_					0	0	0			REV__ENST00000479096.1_1_20:30135258-30136578:+|nuORF	REV__ENST00000479096.1_1_20:30135258-30136578:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7802734375	2	434.778754	867.542954	0.048931	2.1274E-05	3.263	0.0014187	3.312	0.00144	434.780055906595	38.381	1.4097	38.353	37.994	39.403	-0.027843					122	32	4	0	0	0	0.85277	2	2713	2713;2725		30.504	0	1	2404700	+		58102	27393	38807	38823	65922;65923	65922					0.10388447425282266
TKPTLLVP	8	Unmodified	_TKPTLLVP_					0	0	0			REV__ENST00000479096.1_1_20:30135258-30136578:+|nuORF	REV__ENST00000479096.1_1_20:30135258-30136578:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.78021240234375	2	434.778754	867.542954	-0.14051	-6.1091E-05	3.4383	0.0014949	3.2978	0.0014338	434.7801225093181	38.257	1.3722	38.268	37.812	39.184	0.011173					116	31	4	0	0	0	0.85277	1	2683	2683		25.45	0	1	2138600	+		58103	27393	38807	38823	65924	65924					0.10388447425282266
TKPTLLVP	8	Unmodified	_TKPTLLVP_					0	0	0			REV__ENST00000479096.1_1_20:30135258-30136578:+|nuORF	REV__ENST00000479096.1_1_20:30135258-30136578:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78045654296875	2	434.778754	867.542954	-0.10818	-4.7034E-05	3.1846	0.0013846	3.0765	0.0013376	434.7800213108271	39.594	1.7303	39.546	38.941	40.672	-0.04789					162	53	5	0	0	0	0.87479	1	2372	2372		30.504	0	1	5065300	+		58104	27393	38807	38823	65925	65925					0.10388447425282266
TKPTLLVP	8	Unmodified	_TKPTLLVP_					0	0	0			REV__ENST00000479096.1_1_20:30135258-30136578:+|nuORF	REV__ENST00000479096.1_1_20:30135258-30136578:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7804870605469	2	434.778754	867.542954	-0.30995	-0.00013476	4.1464	0.0018027	3.8364	0.001668	434.78044491218617	37.836	1.2567	38.149	37.864	39.121	0.31312					114	31	4	0	0	0	0.884	1	3063	3063		33.516	0	1	8178800	+		58105	27393	38807	38823	65926	65926					0.10388447425282266
TKPTLLVP	8	Unmodified	_TKPTLLVP_					0	0	0			REV__ENST00000479096.1_1_20:30135258-30136578:+|nuORF	REV__ENST00000479096.1_1_20:30135258-30136578:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7770690917969	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.82658	1	3418	3418		21.96	0	1	15771000	+		58106	27393	38807	38823	65927	65927					0.10388447425282266
TKPTNPRN	8	Unmodified	_TKPTNPRN_					0	0	0			REV__nc|ENSG00000083312|Q92973-3|TNPO1;REV__nc|ENSG00000105576|O14787-2|TNPO2	REV__nc|ENSG00000083312|Q92973-3|TNPO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.2536315917969	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.90089	2	8260	8260;8404		40.778	2.8061	1	1449300	+		58107	16852;17553	38808	38824	65928;65929	65928					0.027191324691784757
TKPTNPRN	8	Unmodified	_TKPTNPRN_					0	0	0			REV__nc|ENSG00000083312|Q92973-3|TNPO1;REV__nc|ENSG00000105576|O14787-2|TNPO2	REV__nc|ENSG00000083312|Q92973-3|TNPO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2539367675781	2	464.253966	926.493378	0.72749	0.00033774	-0.59453	-0.00027601	0.13296	6.1727E-05	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.90089	1	8548	8548		39.253	0.23134	1	1578600	+		58108	16852;17553	38808	38824	65930	65930					0.027191324691784757
TKPTNPRN	8	Unmodified	_TKPTNPRN_					0	0	0			REV__nc|ENSG00000083312|Q92973-3|TNPO1;REV__nc|ENSG00000105576|O14787-2|TNPO2	REV__nc|ENSG00000083312|Q92973-3|TNPO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2557678222656	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.90983	2	8354	8254;8354		44.117	8.2236	1	1603800	+		58109	16852;17553	38808	38824	65931;65932	65932					0.027191324691784757
TKPTNPRN	8	Unmodified	_TKPTNPRN_					0	0	0			REV__nc|ENSG00000083312|Q92973-3|TNPO1;REV__nc|ENSG00000105576|O14787-2|TNPO2	REV__nc|ENSG00000083312|Q92973-3|TNPO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.2538146972656	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.91982	1	9684	9684		45.972	5.1941	1	1215000	+		58110	16852;17553	38808	38824	65933	65933					0.027191324691784757
TKPVAARGVP	10	Unmodified	_TKPVAARGVP_					0	0	0			REV__chr1:30981405-30982540|14|14.21|0.77|4.2|-|2|TE_info:L4_B_Mam,L4_B_Mam_dup20,RTE-X,LINE,donor,-,30982540,30982746|PUM1,None|5	REV__chr1:30981405-30982540|14|14.21|0.77|4.2|-|2|TE_info:L4_B_Mam,L4_B_Mam_dup20,RTE-X,LINE,donor,-,30982540,30982746|PUM1,None|5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.30584716796875	2	498.303458	994.592364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.547	1	52.618	52.118	53.118	0.070713								0	0	0	0.45132	1	4243	4243		22.58	0.89391	1		+		58111	15446	38809	38825	65934	65934					0.09485155434083481
TKPVGILIA	9	Unmodified	_TKPVGILIA_					0	0	0		ENST00000339437.10_1_3:3171710-3171836:+|nuORF	ENST00000339437.10_1_3:3171710-3171836:+|nuORF	ENST00000339437.10_1_3:3171710-3171836:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3019714355469	2	456.299853	910.585153	-0.038834	-1.772E-05	2.5899	0.0011818	2.551	0.001164	456.300922389136	51.424	1.8969	51.422	50.771	52.668	-0.0020447					87	49	2	0	0	0	0.7932	1	4349	4349		24.203	3.7209	1	84869			58112	10222	38810	38826	65935	65935					0.12628422833643071
TKPVTTTK	8	Unmodified	_TKPVTTTK_					0	0	0		nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;ENSG00000163359|ENST00000295550|COL6A3;ENST00000491769.1_1_2:238233419-238250825:-|nuORF	nc|ENSG00000163359|P12111-4|COL6A3	nc|ENSG00000163359|P12111-4|COL6A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26275634765625	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.83831	1	2864	2864		23.523	2.5758	1	2862500			58113	5787	38811	38827	65936	65936					0.07010669040221273
TKPYITPAVH	10	Unmodified	_TKPYITPAVH_					0	0	0		ENSG00000101574|ENST00000574538|METTL4;ENST00000573134.1_1_18:2554662-2567215:-|nuORF	ENSG00000101574|ENST00000574538|METTL4	ENSG00000101574|ENST00000574538|METTL4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	563.8153686523438	2	563.816399	1125.61824	0.45419	0.00025608	1.3393	0.00075513	1.7935	0.0010112	563.8167702097873	55.166	0.92021	55.257	54.867	55.787	0.091167					32	25	2	0	0	0	0.86272	1	4603	4603		24.519	0	1	107410			58114	1950	38812	38828	65937	65937					0.060460048857066795
TKQEPQGEGKH	11	Unmodified	_TKQEPQGEGKH_					0	0	0			REV__ENSG00000275004|ENST00000626650|ZNF280B	REV__ENSG00000275004|ENST00000626650|ZNF280B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76690673828125	3	413.542314	1237.60511	2.3085	0.00095467	4.4015	0.0018202	6.71	0.0027749	413.54406648061286	49.601	1.2372	49.604	49.059	50.297	0.0035973					89	27	4	0	0	0	0.17272	1	4115	4115		38.714	24.628	1	1143200	+		58115	24006	38813	38829	65938	65938					-0.004184779643310321
TKQEPQGEGKH	11	Unmodified	_TKQEPQGEGKH_					0	0	0			REV__ENSG00000275004|ENST00000626650|ZNF280B	REV__ENSG00000275004|ENST00000626650|ZNF280B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	413.542314	1237.60511	-0.032618	-1.3489E-05	6.723	0.0027803	6.6904	0.0027668	413.545005702557	49.464	1.1751	49.461	49.004	50.179	-0.0030327	-0.050387	0.00069834	NaN	38.714	84	27	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	913380	+		58116	24006	38813	38829							-0.004184779643310321
TKQEPQGEGKH	11	Unmodified	_TKQEPQGEGKH_					0	0	0			REV__ENSG00000275004|ENST00000626650|ZNF280B	REV__ENSG00000275004|ENST00000626650|ZNF280B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	413.542314	1237.60511	-0.79233	-0.00032766	7.4945	0.0030993	6.7022	0.0027716	413.5453267660619	49.493	1.4129	49.469	48.97	50.383	-0.024029	-0.042223	0.0016555	NaN	38.714	88	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1115800	+		58117	24006	38813	38829							-0.004184779643310321
TKQKEQTY	8	Unmodified	_TKQKEQTY_					0	0	0		L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|4|1|sense	L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|4|1|sense	L1PB1_dup731|chr1:227526503-227528154:-|1.0176234422130557|0.2890219774706773|1.82|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.2689819335938	2	513.266739	1024.51892	0.27431	0.00014079	3.6913	0.0018946	3.9656	0.0020354	513.2685557293674	79.165	0.93721	79.714	79.403	80.34	0.54945					42	21	3	0	0	0	0.92457	1	9103	9103		47.916	3.7988	1	593480			58118	14686	38814	38830	65939	65939					0.007645622009476938
TKQLTHAV	8	Unmodified	_TKQLTHAV_					0	0	0			REV__ENSG00000166819|ENST00000300055|PLIN1	REV__ENSG00000166819|ENST00000300055|PLIN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.26104736328125	2	449.261259	896.507966	0.057954	2.6037E-05	-1.3536	-0.00060812	-1.2956	-0.00058208	449.2605008010548	66.1	1.0485	66.652	66.2	67.248	0.5526					65	29	3	0	0	0	0.87479	1	7190	7190		30.504	8.5438	1	957500	+		58119	21324	38815	38831	65940	65940					0.055572046173210765
TKQPEMHIK	9	Unmodified	_TKQPEMHIK_					0	0	0			REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|114|2|sense	REV__L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|114|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	556.80078125	2	556.300059	1110.58556	-0.75509	-0.00042006	-2.6758	-0.0014886	-3.4309	-0.0019086	556.29824001144	68.93	0.60598	68.996	68.648	69.254	0.065506					41	26	2	0	0	0	0.6204	1	6198	6198		45.972	0.020292	1	90041	+		58120	29503	38816	38832	65941	65941					0.03469474491203073
TKQPLLVG	8	Unmodified	_TKQPLLVG_					0	0	0			REV__ENST00000454426.1_1_6:25882256-25882391:-|nuORF	REV__ENST00000454426.1_1_6:25882256-25882391:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	427.30291748046875	2	428.268553	854.522553	-0.99638	-0.00042672	2.6081	0.001117	1.6117	0.00069024	428.27011863803165	63.953	0.30363	63.983	63.849	64.153	0.030243					14	11	2	0	0	0	0.4196	1	5630	5630		50.025	14.824	1	48452	+		58121	26924	38817	38833	65942	65942					0.08947276765479728
TKQRHGQDVPE	11	Unmodified	_TKQRHGQDVPE_					0	0	0			REV__ENSG00000149577|ENST00000324225|SIDT2	REV__ENSG00000149577|ENST00000324225|SIDT2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5976867675781	3	432.221464	1293.64256	2.4277	0.0010493	4.0345	0.0017438	6.4622	0.0027931	432.55850892676267	106.47	0.17537	106.51	106.41	106.59	0.03688					5	3	2	0	0	0	0.17437	1	11651	11651		7.3413	0	1	39701	+		58122	20181	38818	38834	65943	65943					0.007486133012889695
TKQRKSKEI	9	Unmodified	_TKQRKSKEI_					0	0	0		ENSG00000171617|ENST00000302351|ENC1;nc|ENSG00000171617|O14682-2|ENC1	ENSG00000171617|ENST00000302351|ENC1	ENSG00000171617|ENST00000302351|ENC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	559.3314819335938	2	559.33803	1116.66151	0.12372	6.9204E-05	-3.4985	-0.0019569	-3.3748	-0.0018877	559.3359036293601	31.463	0.74524	31.412	31.127	31.872	-0.051031					35	16	3	0	0	0	0.77244	1	1769	1769		32.812	3.6424	1	118640			58123	6689	38819	38835	65944	65944					0.10784194663006019
TKQVKSHQLVK	11	Unmodified	_TKQVKSHQLVK_					0	0	0		ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2226257324219	3	432.597983	1294.77212	-1.1791	-0.00051006	0.87563	0.00037879	-0.30344	-0.00013127	432.59842437735443	39.382	0.25356	39.75	39.687	39.94	0.36797					6	5	2	0	0	0	0.17502	1	3313	3313		25.892	11.113	1	179090			58124	7762	38820	38836	65945	65945					0.13652414651210165
TKRALFLF	8	Unmodified	_TKRALFLF_					0	0	0			REV__ENST00000473000.2_1_6:3267793-3267943:+|nuORF	REV__ENST00000473000.2_1_6:3267793-3267943:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.3063659667969	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.727	1	52.653	52.153	53.153	-0.074509								0	0	0	0.29816	1	4272	4272		38.806	3.6054	1		+		58125	27274	38821	38837	65946	65946					0.09887244927790562
TKRARLLY	8	Unmodified	_TKRARLLY_					0	0	0		ENST00000536250.1_1_11:61204372-61205638:+|nuORF;ENSG00000256591|ENST00000541135|unknown;ENSG00000167985|ENST00000301761|SDHAF2	ENST00000536250.1_1_11:61204372-61205638:+|nuORF	ENST00000536250.1_1_11:61204372-61205638:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8204040527344	2	510.819276	1019.624	1.5123	0.00077251	0.3656	0.00018675	1.8779	0.00095926	510.81939038827716	94.589	0.80517	95.022	94.713	95.518	0.4324					51	18	4	0	0	0	0.88944	1	11275	11275		57.811	3.0466	1	731510			58126	6349	38822	38838	65947	65947					0.11497148188027495
TKRASLIAH	9	Unmodified	_TKRASLIAH_					0	0	0			REV__ENSG00000129951|ENST00000520876|PLPPR3	REV__ENSG00000129951|ENST00000520876|PLPPR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	499.3021545410156	2	498.801083	995.587613	0.3731	0.0001861	-0.12173	-6.0717E-05	0.25138	0.00012539	498.80309173814476	53.226	0.55856	53.296	53.083	53.642	0.070713					22	15	2	0	0	0	0.78058	1	4340	4340		30.504	3.7075	1	55521	+		58127	18838	38823	38839	65948	65948					0.08964271291324621
TKRDTLSISL	10	Unmodified	_TKRDTLSISL_					0	0	0			REV__ENSG00000137812|ENST00000399668|KNL1	REV__ENSG00000137812|ENST00000399668|KNL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.330810546875	2	567.32987	1132.64519	0.77491	0.00043963	-0.4618	-0.00026199	0.31311	0.00017764	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.86348	1	8891	8891		31.53	2.3598	1	6344600	+		58128	19410	38824	38840	65949	65949					0.08417068706262398
TKRGRAPLVLP	11	Unmodified	_TKRGRAPLVLP_					0	0	0			REV__ENSG00000125901|ENST00000380325|MRPS26	REV__ENSG00000125901|ENST00000380325|MRPS26	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.24688720703125	3	403.259302	1206.75608	-1.7906	-0.00072209	-3.3722	-0.0013599	-5.1628	-0.002082	403.25845917479523	104.38	0.46709	104.56	104.42	104.89	0.17096					15	11	2	0	0	0	0.1729	1	11113	11113		2.8518	0	1	167440	+		58129	18681	38825	38841	65950	65950					0.16096753204965353
TKRHTLTT	8	Unmodified	_TKRHTLTT_					0	0	0			REV__ENSG00000105131|ENST00000221730|EPHX3	REV__ENSG00000105131|ENST00000221730|EPHX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2791442871094	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.91472	1	8017	8017		44.117	8.4985	1	2046100	+		58130	17507	38826	38842	65951	65951					0.06031992020314192
TKRHTLTT	8	Unmodified	_TKRHTLTT_					0	0	0			REV__ENSG00000105131|ENST00000221730|EPHX3	REV__ENSG00000105131|ENST00000221730|EPHX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27789306640625	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.87922	1	7740	7740		31.955	1.6371	1	2142700	+		58131	17507	38826	38842	65952	65952					0.06031992020314192
TKRHTLTT	8	Unmodified	_TKRHTLTT_					0	0	0			REV__ENSG00000105131|ENST00000221730|EPHX3	REV__ENSG00000105131|ENST00000221730|EPHX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2775573730469	2	479.277441	956.540328	0.61468	0.0002946	-0.83418	-0.0003998	-0.2195	-0.0001052	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.89494	1	7811	7811		37.159	0	1	1802300	+		58132	17507	38826	38842	65953	65953					0.06031992020314192
TKRHTLTT	8	Unmodified	_TKRHTLTT_					0	0	0			REV__ENSG00000105131|ENST00000221730|EPHX3	REV__ENSG00000105131|ENST00000221730|EPHX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2781677246094	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.84341	2	7703	7703;7984		31.955	1.6371	1	1785900	+		58133	17507	38826	38842	65954;65955	65954					0.06031992020314192
TKRIAFLF	8	Unmodified	_TKRIAFLF_					0	0	0		ENSG00000176853|ENST00000334705|FAM91A1	ENSG00000176853|ENST00000334705|FAM91A1	ENSG00000176853|ENST00000334705|FAM91A1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.3058776855469	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.602	1	52.578	52.078	53.078	-0.023849								0	0	0	0.30252	1	4659	4659		19.36	0	1				58134	7099	38827	38843	65956	65956					0.09887244927790562
TKRIAFLF	8	Unmodified	_TKRIAFLF_					0	0	0		ENSG00000176853|ENST00000334705|FAM91A1	ENSG00000176853|ENST00000334705|FAM91A1	ENSG00000176853|ENST00000334705|FAM91A1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.3061828613281	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.686	1	52.703	52.203	53.203	0.017487								0	0	0	0.29344	1	4604	4604		31.955	0	1				58135	7099	38827	38843	65957	65957					0.09887244927790562
TKRIATFRKSL	11	Unmodified	_TKRIATFRKSL_					0	0	0			REV__nc|ENSG00000089723|Q96DC9-2|OTUB2	REV__nc|ENSG00000089723|Q96DC9-2|OTUB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2552185058594	3	440.941861	1319.80375	0.3834	0.00016906	-2.5682	-0.0011324	-2.1848	-0.00096335	440.94091948919055	63.767	0.13107	64.321	64.256	64.387	0.5545					4	2	2	0	0	0	0.17911	1	6892	6892		3.026	0	1	16268	+		58136	16974	38828	38844	65958	65958					0.15664407405165548
TKRIVHKVY	9	Unmodified	_TKRIVHKVY_					0	0	0			REV__ENST00000276569.7_1_8:66516226-66516463:-|nuORF	REV__ENST00000276569.7_1_8:66516226-66516463:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.2869873046875	2	572.353483	1142.69241	-0.22258	-0.00012739	-1.1568	-0.00066211	-1.3794	-0.00078951	572.3527297739739	78.68	0.80652	79.09	78.675	79.482	0.41059					32	18	2	0	0	0	0.20789	1	8981	8981		39.253	7.723	1	479580	+		58137	24582	38829	38845	65959	65959					0.12677392767886886
TKRIVHKVY	9	Unmodified	_TKRIVHKVY_					0	0	0			REV__ENST00000276569.7_1_8:66516226-66516463:-|nuORF	REV__ENST00000276569.7_1_8:66516226-66516463:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.2877197265625	2	572.353483	1142.69241	0.17459	9.9928E-05	-1.3533	-0.00077456	-1.1787	-0.00067464	572.3525358014986	78.508	0.7999	79.072	78.659	79.459	0.56332					37	18	3	0	0	0	0.20789	1	9001	9001		34.173	14.176	1	308950	+		58138	24582	38829	38845	65960	65960					0.12677392767886886
TKRLHTLEEV	10	Unmodified	_TKRLHTLEEV_					0	0	0		nc|ENSG00000125447|Q9NZ52-3|GGA3;nc|ENSG00000125447|Q9NZ52-4|GGA3;nc|ENSG00000125447|Q9NZ52-2|GGA3;ENSG00000125447|ENST00000537686|GGA3	nc|ENSG00000125447|Q9NZ52-3|GGA3	nc|ENSG00000125447|Q9NZ52-3|GGA3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.5840759277344	3	409.234822	1224.68264	1.3386	0.00054781	2.6772	0.0010956	4.0158	0.0016434	409.2355515822214	25.144	0.17943	24.816	24.703	24.883	-0.32825					5	3	2	0	0	0	0.37624	1	1266	1266		29.551	11.02	1	17799			58139	3390	38830	38846	65961	65961					0.07928159971834248
TKRLLPAA	8	Unmodified	_TKRLLPAA_					0	0	0			REV__ENSG00000075643|ENST00000261326|MOCOS	REV__ENSG00000075643|ENST00000261326|MOCOS	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2803649902344	2	435.281995	868.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.666	1	33.774	33.274	34.274	0.10829								0	0	0	0.29755	1	1660	1660		24.203	0	1		+		58140	16714	38831	38847	65962	65962					0.10990385376646827
TKRLSEPAAS	10	Unmodified	_TKRLSEPAAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2929077148438	2	530.293288	1058.57202	-0.066725	-3.5384E-05	0.20402	0.00010819	0.1373	7.2808E-05	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.70553	1	9018	9018		44.377	2.9506	1	2084800	+		58141	22907	38832	38848	65963	65963					0.045079399835913136
TKRLSEPAAS	10	Unmodified	_TKRLSEPAAS_					0	0	0			REV__ENSG00000187240|ENST00000375735|DYNC2H1	REV__ENSG00000187240|ENST00000375735|DYNC2H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.29296875	2	530.293288	1058.57202	1.6334	0.0008662	-1.7145	-0.0009092	-0.081076	-4.2994E-05	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.86471	1	10794	10794		30.318	1.1477	1	1816400	+		58142	22907	38832	38848	65964	65964					0.045079399835913136
TKRNIPSVFLE	11	Unmodified	_TKRNIPSVFLE_					0	0	0			REV__nc|ENSG00000153233|Q15256-5|PTPRR	REV__nc|ENSG00000153233|Q15256-5|PTPRR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2489013671875	3	435.250472	1302.72959	0.44652	0.00019435	-3.2702	-0.0014234	-2.8237	-0.001229	435.24894201690216	18.834	0.5574	18.204	17.975	18.533	-0.62961					30	12	4	0	0	0	0.69071	1	451	451		33.039	3.4886	1	223790	+		58143	20339	38833	38849	65965	65965					0.09033019522985342
TKRNVQSLL	9	Unmodified	_TKRNVQSLL_					0	0	0		ENSG00000213160|ENST00000392647|KLHL23	ENSG00000213160|ENST00000392647|KLHL23	ENSG00000213160|ENST00000392647|KLHL23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.8215942382812	2	529.819473	1057.62439	2.384	0.0012631	0.065546	3.4727E-05	2.4495	0.0012978	529.8193122554347	104.74	1.2264	104.9	104.04	105.27	0.15583					44	30	2	0	0	0	0.78528	1	12783	12783		29.17	1.0886	1	320740			58144	8579	38834	38850	65966	65966					0.09788523117231307
TKRPARGG	8	Unmodified	_TKRPARGG_					0	0	0			REV__nc|ENSG00000163159|Q15906-2|VPS72	REV__nc|ENSG00000163159|Q15906-2|VPS72	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.751953125	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.224	1	77.277	76.777	77.777	0.052696								0	0	0	0.29816	1	7474	7474		38.806	3.6054	1		+		58145	20887	38835	38851	65967	65967					0.061148733972345326
TKRPARGG	8	Unmodified	_TKRPARGG_					0	0	0			REV__nc|ENSG00000163159|Q15906-2|VPS72	REV__nc|ENSG00000163159|Q15906-2|VPS72	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7515563964844	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.7961	6	7548	7411;7504;7548;7554;7577;7620		33.516	9.3128	1	532850	+		58146	20887	38835	38851	65968;65969;65970;65971;65972;65973	65970					0.061148733972345326
TKRPARGG	8	Unmodified	_TKRPARGG_					0	0	0			REV__nc|ENSG00000163159|Q15906-2|VPS72	REV__nc|ENSG00000163159|Q15906-2|VPS72	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7513732910156	2	421.751393	841.488233	-1.7782	-0.00074997	4.1035	0.0017306	2.3252	0.00098067	421.75218958440666	77.386	3.85	77.511	77.102	80.952	0.12485					260	132	4	0	0	0	0.91472	1	7287	7287		44.117	10.601	1	434130	+		58147	20887	38835	38851	65974	65974					0.061148733972345326
TKRPARGG	8	Unmodified	_TKRPARGG_					0	0	0			REV__nc|ENSG00000163159|Q15906-2|VPS72	REV__nc|ENSG00000163159|Q15906-2|VPS72	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.7513427734375	2	421.751393	841.488233	0.52197	0.00022014	-0.4025	-0.00016975	0.11948	5.0389E-05	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.84341	1	7206	7206		24.203	0	1	423780	+		58148	20887	38835	38851	65975	65975					0.061148733972345326
TKRQITQN	8	Unmodified	_TKRQITQN_					0	0	0		ENST00000561481.1_1_16:74497249-74497312:-|nuORF;ENST00000422840.6_1_16:74496491-74497312:-|nuORF;ENST00000563646.1_1_16:74495883-74497335:-|nuORF;ENST00000561481.1_1_16:74497146-74501752:-|nuORF;ENST00000562090.5_1_16:74487067-74506519:-|nuORF;ENSG00000090863|ENST00000422840|GLG1;nc|ENSG00000090863|Q92896-3|GLG1;nc|ENSG00000090863|Q92896-2|GLG1	ENST00000561481.1_1_16:74497249-74497312:-|nuORF	ENST00000561481.1_1_16:74497249-74497312:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.78125	2	494.780348	987.546142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.418	1	85.566	85.066	86.066	0.14857								0	0	0	0.29264	1	8357	8357		29.15	1.2673	1				58149	1657	38836	38852	65976	65976					0.05187090531978811
TKRSKMIQLH	10	Unmodified	_TKRSKMIQLH_					0	0	0			REV__ENST00000342506.2_1_2:197672156-197673984:-|nuORF	REV__ENST00000342506.2_1_2:197672156-197673984:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.5765075683594	3	414.576413	1240.70741	-0.11717	-4.8575E-05	0.61997	0.00025702	0.5028	0.00020845	414.5766103778177	67.467	0.8855	68.015	67.648	68.534	0.54819					37	20	2	0	0	0	0.83456	1	7458	7458		37.508	7.9574	1	248420	+		58150	25275	38837	38853	65977	65977					0.09668516573583474
TKRSSRNPVF	10	Unmodified	_TKRSSRNPVF_					0	0	0		nc|ENSG00000133193|Q969W3|VCF1;ENSG00000133193|ENST00000405159|FAM104A	nc|ENSG00000133193|Q969W3|VCF1	nc|ENSG00000133193|Q969W3|VCF1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3328247070312	2	596.333279	1190.652	-0.30561	-0.00018224	-0.32296	-0.00019259	-0.62857	-0.00037483	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.64457	1	9614	9614		47.657	4.7931	1	740920			58151	3865	38838	38854	65978	65978					0.06430426377460208
TKRVSFLRHPL	11	Unmodified	_TKRVSFLRHPL_					0	0	0			REV__ENST00000371315.3_1_X:119738605-119738683:+|nuORF	REV__ENST00000371315.3_1_X:119738605-119738683:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.94287109375	3	451.941973	1352.80409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.077	1	55.077	54.577	55.577	0								0	0	0	0.56276	1	4657	4657		17.167	3.6588	1		+		58152	25682	38839	38855	65979	65979					0.14179827125030897
TKRVSFLRHPL	11	Unmodified	_TKRVSFLRHPL_					0	0	0			REV__ENST00000371315.3_1_X:119738605-119738683:+|nuORF	REV__ENST00000371315.3_1_X:119738605-119738683:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9455871582031	3	451.941973	1352.80409	0.347	0.00015682	2.6456	0.0011957	2.9926	0.0013525	451.94308439808714	55.355	1.4573	55.446	54.835	56.292	0.091167					122	48	4	0	0	0	0.74002	1	4675	4675		24.276	5.3096	1	477300	+		58153	25682	38839	38855	65980	65980					0.14179827125030897
TKRVSFLRHPL	11	Unmodified	_TKRVSFLRHPL_					0	0	0			REV__ENST00000371315.3_1_X:119738605-119738683:+|nuORF	REV__ENST00000371315.3_1_X:119738605-119738683:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.94317626953125	3	451.941973	1352.80409	-0.61036	-0.00027585	3.6213	0.0016366	3.0109	0.0013608	451.94349825987973	55.257	1.4276	55.22	54.668	56.095	-0.036823					123	46	4	0	0	0	0.75779	1	4675	4675		20.315	1.784	1	459960	+		58154	25682	38839	38855	65981	65981					0.14179827125030897
TKRVSFLRHPL	11	Unmodified	_TKRVSFLRHPL_					0	0	0			REV__ENST00000371315.3_1_X:119738605-119738683:+|nuORF	REV__ENST00000371315.3_1_X:119738605-119738683:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.9432373046875	3	451.941973	1352.80409	0.93902	0.00042438	1.7195	0.0007771	2.6585	0.0012015	451.94264736171164	50.689	2.054	51.44	50.261	52.315	0.75174					139	49	4	0	0	0	0.73277	1	5002	5002		25.892	8.725	1	756920	+		58155	25682	38839	38855	65982	65982					0.14179827125030897
TKRVTPKISPL	11	Unmodified	_TKRVTPKISPL_					0	0	0			REV__nc|ENSG00000137337|Q14676-3|MDC1	REV__nc|ENSG00000137337|Q14676-3|MDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9322814941406	3	413.930962	1238.77106	1.6433	0.00068023	2.1649	0.00089611	3.8082	0.0015763	413.9318142026393	43.114	2.2589	43.114	42.157	44.416	0.00016785					149	54	3	0	0	0	0.76087	1	3406	3406		19.627	1.0959	1	500010	+		58156	19378	38840	38856	65983	65983					0.161222002823024
TKSFNGKQA	9	Unmodified	_TKSFNGKQA_					0	0	0			REV__nc|ENSG00000175216|Q14008-2|CKAP5	REV__nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.76171875	2	490.761623	979.508694	1.0176	0.0004994	-1.0729	-0.00052653	-0.055295	-2.7137E-05	490.76098743641063	19.162	0.4111	19.235	19.012	19.423	0.073465					20	12	2	0	0	0	0.69624	1	379	379		40.778	0	1	51389	+		58157	22050	38841	38857	65984	65984					0.01811999266374187
TKSFNGKQA	9	Unmodified	_TKSFNGKQA_					0	0	0			REV__nc|ENSG00000175216|Q14008-2|CKAP5	REV__nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.7611999511719	2	490.761623	979.508694	-0.27056	-0.00013278	-1.1408	-0.00055988	-1.4114	-0.00069267	490.76102974449566	20.477	0.36062	20.407	20.245	20.606	-0.069735					26	15	2	0	0	0	0.77244	1	539	539		32.812	0	1	32373	+		58158	22050	38841	38857	65985	65985					0.01811999266374187
TKSIKKQVKIG	11	Unmodified	_TKSIKKQVKIG_					0	0	0		nc|ENSG00000115109|Q9HCM4-2|EPB41L5;nc|ENSG00000115109|Q9HCM4-4|EPB41L5;nc|ENSG00000115109|Q9HCM4-3|EPB41L5;ENSG00000115109|ENST00000263713|EPB41L5;ENST00000466241.1_1_2:120776798-120831755:+|nuORF	nc|ENSG00000115109|Q9HCM4-2|EPB41L5	nc|ENSG00000115109|Q9HCM4-2|EPB41L5	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.40576171875	2	615.40063	1228.78671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.568	1	51.603	51.103	52.103	0.034588								0	0	0	0.56276	1	4114	4114		20.03	1.4994	1				58159	2813	38842	38858	65986	65986					0.18146486799355444
TKSKDGLS	8	Unmodified	_TKSKDGLS_					0	0	0			REV__AluSx_dup30022|chr5:14515214-14515541:-|2.928452429573868|0.0062677388586443|8.87|63.0|3|1|sense	REV__AluSx_dup30022|chr5:14515214-14515541:-|2.928452429573868|0.0062677388586443|8.87|63.0|3|1|sense	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	418.2292175292969	2	418.229625	834.444697	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.956	1	27.065	26.565	27.565	0.10901								0	0	0	0.30712	1	1053	1053		49.442	5.0644	1		+		58160	15395	38843	38859	65987	65987					0.020852191094377304
TKSKLIGG	8	Unmodified	_TKSKLIGG_					0	0	0			REV__ENSG00000171729|ENST00000376008|TMEM51	REV__ENSG00000171729|ENST00000376008|TMEM51	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.2518310546875	2	402.252903	802.491253	-1.9385	-0.00077976	1.1499	0.00046257	-0.78852	-0.00031719	402.25323570415725	20.33	0.48855	20.374	20.211	20.699	0.043747					36	23	2	0	0	0	0.86288	1	481	481		26.796	5.0938	1	238530	+		58161	21763	38844	38860	65988	65988					0.08210703731378999
TKSKLIGG	8	Unmodified	_TKSKLIGG_					0	0	0			REV__ENSG00000171729|ENST00000376008|TMEM51	REV__ENSG00000171729|ENST00000376008|TMEM51	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	402.252903	802.491253	-2.1641	-0.00087053	1.5209	0.00061177	-0.64329	-0.00025876	402.25334499904955	20.299	0.33507	20.299	20.129	20.465	0	-0.1035	0.0020212	NaN	26.796	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43260	+		58162	21763	38844	38860							0.08210703731378999
TKSKLIGG	8	Unmodified	_TKSKLIGG_					0	0	0			REV__ENSG00000171729|ENST00000376008|TMEM51	REV__ENSG00000171729|ENST00000376008|TMEM51	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	402.252903	802.491253	0.85145	0.0003425	-1.548	-0.00062268	-0.69653	-0.00028018	402.25217136460924	20.311	0.52913	20.382	20.166	20.696	0.071127	-0.020944	-0.00044768	NaN	26.796	33	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96246	+		58163	21763	38844	38860							0.08210703731378999
TKSKLIGG	8	Unmodified	_TKSKLIGG_					0	0	0			REV__ENSG00000171729|ENST00000376008|TMEM51	REV__ENSG00000171729|ENST00000376008|TMEM51	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	402.252903	802.491253	-0.39493	-0.00015886	-0.36957	-0.00014866	-0.7645	-0.00030752	402.25264263994865	20.613	0.64482	20.543	20.317	20.962	-0.069733	0.14039	0.00050036	NaN	26.796	47	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106120	+		58164	21763	38844	38860							0.08210703731378999
TKSKLIGG	8	Unmodified	_TKSKLIGG_					0	0	0			REV__ENSG00000171729|ENST00000376008|TMEM51	REV__ENSG00000171729|ENST00000376008|TMEM51	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	402.252903	802.491253	2.885	0.0011605	-3.5329	-0.0014211	-0.64792	-0.00026063	402.25136130496463	20.676	0.83968	20.612	20.345	21.184	-0.064058	0.20929	-0.0020446	NaN	26.796	53	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119280	+		58165	21763	38844	38860							0.08210703731378999
TKSKLIGG	8	Unmodified	_TKSKLIGG_					0	0	0			REV__ENSG00000171729|ENST00000376008|TMEM51	REV__ENSG00000171729|ENST00000376008|TMEM51	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	402.252903	802.491253	1.9767	0.00079515	-2.7561	-0.0011086	-0.77935	-0.0003135	402.2516148560502	20.761	0.40775	20.301	20.053	20.461	-0.4591	-0.10117	-0.0014196	NaN	26.796	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200850	+		58166	21763	38844	38860							0.08210703731378999
TKSKLIGG	8	Unmodified	_TKSKLIGG_					0	0	0			REV__ENSG00000171729|ENST00000376008|TMEM51	REV__ENSG00000171729|ENST00000376008|TMEM51	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	402.252903	802.491253	-0.15523	-6.2442E-05	-0.84641	-0.00034047	-1.0016	-0.00040291	402.2523338674611	20.936	0.50844	20.308	19.985	20.494	-0.62835	-0.095112	0.00011673	NaN	26.796	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	184260	+		58167	21763	38844	38860							0.08210703731378999
TKSLHRPSKTL	11	Unmodified	_TKSLHRPSKTL_					0	0	0			REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8775634765625	2	634.377686	1266.74082	-0.011361	-7.2071E-06	-0.68671	-0.00043563	-0.69807	-0.00044284	634.3770915186655	109.72	1.7775	109.72	109.29	111.07	0					117	70	2	0	0	0	0.72739	1	11430	11430		27.047	0.3544	1	549070	+		58168	26677	38845	38861	65989	65989					0.11811841617145546
TKSLHRPSKTL	11	Unmodified	_TKSLHRPSKTL_					0	0	0			REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3765869140625	2	634.377686	1266.74082	-0.13776	-8.7389E-05	-0.53102	-0.00033687	-0.66878	-0.00042426	634.3771594108364	117.84	0.45279	117.77	117.69	118.15	-0.07531					44	17	3	0	0	0	0.65746	1	12653	12653		37.812	2.6595	1	1053300	+		58169	26677	38845	38861	65990	65990					0.11811841617145546
TKSLHRPSKTL	11	Unmodified	_TKSLHRPSKTL_					0	0	0			REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3770141601562	2	634.377686	1266.74082	1.3188	0.00083664	-1.7871	-0.0011337	-0.46828	-0.00029707	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.69931	4	12498	12498;12570;12834;12949		31.634	7.2102	1	12917000	+		58170	26677	38845	38861	65991;65992;65993;65994	65991					0.11811841617145546
TKSLHRPSKTL	11	Unmodified	_TKSLHRPSKTL_					0	0	0			REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3770751953125	2	634.377686	1266.74082	1.4899	0.00094515	-2.6111	-0.0016564	-1.1213	-0.0007113	634.3759288253121	109.92	1.3103	110.04	109.37	110.68	0.12289					100	52	2	0	0	0	0.69995	2	11821	11821;11845		31.53	2.3598	1	14976000	+		58171	26677	38845	38861	65995;65996	65995					0.11811841617145546
TKSLHRPSKTL	11	Unmodified	_TKSLHRPSKTL_					0	0	0			REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.3760986328125	2	634.377686	1266.74082	1.4914	0.00094611	-2.8382	-0.0018005	-1.3468	-0.00085438	634.3756552594748	112.2	0.31043	112.3	112.17	112.48	0.10638					42	11	4	0	0	0	0.66929	1	12078	12078		36.447	0.82846	1	11155000	+		58172	26677	38845	38861	65997	65997					0.11811841617145546
TKSLHRPSKTL	11	Unmodified	_TKSLHRPSKTL_					0	0	0			REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8788452148438	2	634.377686	1266.74082	0.9338	0.00059238	-1.9771	-0.0012542	-1.0433	-0.00066186	634.376227424202	109.98	1.2195	110.05	109.76	110.98	0.073685					116	43	3	0	0	0	0.69248	1	11792	11792		32.751	8.2313	1	11835000	+		58173	26677	38845	38861	65998	65998					0.11811841617145546
TKSLHRPSKTL	11	Unmodified	_TKSLHRPSKTL_					0	0	0			REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3763427734375	2	634.377686	1266.74082	-1.1774	-0.00074689	0.2391	0.00015168	-0.93826	-0.00059521	634.3776925529805	109.87	1.6182	109.87	109.32	110.94	0.0060425					148	63	3	0	0	0	0.68532	3	11723	11723;11732;11768		33.922	7.2287	1	2778200	+		58174	26677	38845	38861	65999;66000;66001	65999					0.11811841617145546
TKSLHRPSKTL	11	Unmodified	_TKSLHRPSKTL_					0	0	0			REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3767700195312	2	634.377686	1266.74082	-1.1773	-0.00074688	0.036396	2.3089E-05	-1.1409	-0.00072379	634.3774291341157	112.05	1.1748	112.03	111.8	112.98	-0.019882					84	36	4	0	0	0	0.73893	1	12001	12001		24.519	0	1	22589000	+		58175	26677	38845	38861	66002	66002					0.11811841617145546
TKSLHRPSKTL	11	Unmodified	_TKSLHRPSKTL_					0	0	0			REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	REV__ENST00000435581.7_1_X:2573089-2573287:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3768310546875	2	634.377686	1266.74082	2.1873	0.0013876	-2.6623	-0.0016889	-0.47502	-0.00030134	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.732	1	13343	13343		26.063	3.0209	1	6886400	+		58176	26677	38845	38861	66003	66003					0.11811841617145546
TKSLVLRRPF	10	Unmodified	_TKSLVLRRPF_					0	0	0			REV__ENST00000568087.5_1_15:74202119-74212212:-|nuORF	REV__ENST00000568087.5_1_15:74202119-74212212:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25726318359375	3	406.255669	1215.74518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.902	1	54.853	54.353	55.353	-0.049271								0	0	0	0.45132	1	4571	4571		7.3997	0	1		+		58177	28892	38846	38862	66004	66004					0.1459335083068254
TKSPASIPHS	10	Unmodified	_TKSPASIPHS_					0	0	0			REV__nc|ENSG00000010803|Q96GD3-5|SCMH1	REV__nc|ENSG00000010803|Q96GD3-5|SCMH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.7745361328125	2	512.774731	1023.53491	-0.050404	-2.5846E-05	-0.62987	-0.00032298	-0.68027	-0.00034882	512.7743229859149	45.174	0.62418	45.105	44.768	45.392	-0.06863					30	14	3	0	0	0	0.66675	1	3231	3231		46.457	5.0302	1	318280	+		58178	16172	38847	38863	66005	66005					0.024082684378413433
TKSPHRSA	8	Unmodified	_TKSPHRSA_					0	0	0		ENSG00000214700|ENST00000429849|C12orf71	ENSG00000214700|ENST00000429849|C12orf71	ENSG00000214700|ENST00000429849|C12orf71	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2410888671875	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.88185	1	7648	7648		32.812	0.85756	1	1068200			58179	8634	38848	38864	66006	66006					0.021228632976999506
TKSPHRSA	8	Unmodified	_TKSPHRSA_					0	0	0		ENSG00000214700|ENST00000429849|C12orf71	ENSG00000214700|ENST00000429849|C12orf71	ENSG00000214700|ENST00000429849|C12orf71	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24114990234375	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.89962	1	7391	7391		38.806	1.647	1	1094000			58180	8634	38848	38864	66007	66007					0.021228632976999506
TKSPHRSA	8	Unmodified	_TKSPHRSA_					0	0	0		ENSG00000214700|ENST00000429849|C12orf71	ENSG00000214700|ENST00000429849|C12orf71	ENSG00000214700|ENST00000429849|C12orf71	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2417297363281	2	442.240858	882.467164	-1.4875	-0.00065783	1.6878	0.00074643	0.20036	8.8607E-05	442.24148848241214	79.629	2.7036	79.728	77.569	80.272	0.098701					195	94	3	0	0	0	0.87479	1	7386	7386		30.504	2.6214	1	257300			58181	8634	38848	38864	66008	66008					0.021228632976999506
TKSPLIPL	8	Unmodified	_TKSPLIPL_					0	0	0			REV__nc|ENSG00000143322|P42684-4|ABL2	REV__nc|ENSG00000143322|P42684-4|ABL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7803955078125	2	434.778754	867.542954	0.085891	3.7343E-05	2.526	0.0010983	2.6119	0.0011356	434.77973178522114	39.697	1.6335	39.706	39.141	40.774	0.0092812					137	39	4	0	0	0	0.86288	1	2743	2743		26.796	0	1	4100400	+		58182	19790	38849	38865	66009	66009					0.10388447425293634
TKSRFRLLI	9	Unmodified	_TKSRFRLLI_					0	0	0			REV__ENST00000392396.7_2_3:195798352-195799015:-|nuORF	REV__ENST00000392396.7_2_3:195798352-195799015:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3615112304688	2	567.361308	1132.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.096	1	41.169	40.669	41.669	0.073414								0	0	0	0.31828	1	2661	2661		24.203	0.68005	1		+		58183	26019	38850	38866	66010	66010					0.14701679284939928
TKSSVTGKV	9	Unmodified	_TKSSVTGKV_					0	0	0		nc|ENSG00000106278|P23471-2|PTPRZ1;ENSG00000106278|ENST00000393386|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	nc|ENSG00000106278|P23471-2|PTPRZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.7657775878906	2	453.766374	905.518196	-1.1321	-0.0005137	-0.08557	-3.8829E-05	-1.2176	-0.00055253	453.76616777983287	42.672	2.6946	42.633	41.368	44.062	-0.038223					96	64	2	0	0	0	0.78124	1	3294	3294		30.318	1.1682	1	295630			58184	2287	38851	38867	66011	66011					0.061657675519199984
TKSTLLRGI	9	Unmodified	_TKSTLLRGI_					0	0	0		ENST00000394456.9_1_19:6389626-6392898:-|nuORF	ENST00000394456.9_1_19:6389626-6392898:-|nuORF	ENST00000394456.9_1_19:6389626-6392898:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.31396484375	2	494.811116	987.60768	-0.073772	-3.6503E-05	3.3768	0.0016709	3.303	0.0016344	494.81248076616197	108.78	0.78468	108.73	108.35	109.14	-0.049324					63	32	2	0	0	0	0.77696	1	11843	11843		31.53	1.2121	1	858000			58185	11068	38852	38868	66012	66012					0.11338022231291234
TKSTTPPQLTT	11	Unmodified	_TKSTTPPQLTT_					0	0	0			REV__nc|ENSG00000106384|Q86VF5-2|MOGAT3	REV__nc|ENSG00000106384|Q86VF5-2|MOGAT3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.7890014648438	2	587.819335	1173.62412	0.91434	0.00053747	3.2369	0.0019027	4.1513	0.0024402	587.8213157123765	96.833	0.2914	97.223	97.031	97.323	0.39065					9	6	2	0	0	0	0.1731	1	11643	11643		35.152	14.12	1	51253	+		58186	17609	38853	38869	66013	66013					0.0442505860669371
TKSVTTTWKI	10	Unmodified	_TKSVTTTWKI_					0	0	0			REV__ENSG00000104237|ENST00000220676|RP1	REV__ENSG00000104237|ENST00000220676|RP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8320922851562	2	582.834788	1163.65502	0.11318	6.5963E-05	-3.7555	-0.0021889	-3.6424	-0.0021229	582.8325626554922	94.252	3.4585	94.298	93.323	96.781	0.046173					208	81	3	0	0	0	0.86587	1	9831	9831		29.17	4.6509	1	743970	+		58187	17443	38854	38870	66014	66014					0.07974256711599992
TKTFHSPEV	9	Unmodified	_TKTFHSPEV_					0	0	0			REV__ENSG00000166833|ENST00000349880|NAV2	REV__ENSG00000166833|ENST00000349880|NAV2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.770751953125	2	523.269281	1044.52401	-0.0086692	-4.5364E-06	0.64195	0.00033591	0.63328	0.00033138	523.2695463937893	69.782	0.61782	69.818	69.495	70.113	0.035622					43	30	2	0	0	0	0.67345	1	6688	6688		42.396	12.078	1	1242100	+		58188	21328	38855	38871	66015	66015					0.0035286606357658457
TKTGLDLH	8	Unmodified	_TKTGLDLH_					0	0	0			REV__ENSG00000007001|ENST00000005756|UPP2	REV__ENSG00000007001|ENST00000005756|UPP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.74481201171875	2	442.745442	883.476331	0.66357	0.00029379	-1.7617	-0.00078	-1.0982	-0.00048621	442.74446013454883	91.838	0.77042	91.994	91.638	92.408	0.15614					40	17	3	0	0	0	0.91472	1	9275	9275		44.117	12.162	1	460360	+		58189	16115	38856	38872	66016	66016					0.029932118633610116
TKTGLDLH	8	Unmodified	_TKTGLDLH_					0	0	0			REV__ENSG00000007001|ENST00000005756|UPP2	REV__ENSG00000007001|ENST00000005756|UPP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7447204589844	2	442.745442	883.476331	0.70525	0.00031225	-2.1241	-0.00094045	-1.4189	-0.0006282	442.7443686579111	91.271	2.0811	91.72	90.611	92.692	0.44958					87	49	3	0	0	0	0.91977	1	10854	10854		45.952	3.4775	1	3166400	+		58190	16115	38856	38872	66017	66017					0.029932118633610116
TKTKKEEKK	9	Unmodified	_TKTKKEEKK_					0	0	0			REV__ENST00000508737.1_1_4:38930819-38945175:+|nuORF	REV__ENST00000508737.1_1_4:38930819-38945175:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3406982421875	2	560.340238	1118.66592	0.75729	0.00042434	-0.8066	-0.00045197	-0.049306	-2.7628E-05	560.3396777082794	89.478	2.7427	89.63	87.684	90.427	0.1519					160	64	4	0	0	0	0.77696	1	8915	8915		31.53	2.3598	1	678500	+		58191	23263	38857	38873	66018	66018					0.11133659085885483
TKTKKILT	8	Unmodified	_TKTKKILT_					0	0	0			REV__ENST00000504859.5_1_5:125807941-125819298:+|nuORF	REV__ENST00000504859.5_1_5:125807941-125819298:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.8084716796875	2	466.810585	931.606617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.279	1	56.351	55.851	56.851	0.071835								0	0	0	0.31173	1	4747	4747		7.1934	0	1		+		58192	20424	38858	38874	66019	66019					0.13807807862360733
TKTKKQTTLA	10	Unmodified	_TKTKKQTTLA_					0	0	0		ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;chr17:40392737-40396283|45|20.71|0.05|8.64|-|2|TOP2A,TOP2A|3	ENSG00000131747|ENST00000423485|TOP2A	ENSG00000131747|ENST00000423485|TOP2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3397827148438	2	560.340238	1118.66592	-0.40673	-0.00022791	0.38832	0.00021759	-0.018409	-1.0315E-05	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.63899	1	10840	10840		47.96	1.9873	1	60162000			58193	3745	38859	38875	66020	66020					0.11133659085908221
TKTKKQTTLA	10	Unmodified	_TKTKKQTTLA_					0	0	0		ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;chr17:40392737-40396283|45|20.71|0.05|8.64|-|2|TOP2A,TOP2A|3	ENSG00000131747|ENST00000423485|TOP2A	ENSG00000131747|ENST00000423485|TOP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3401489257812	2	560.340238	1118.66592	1.6683	0.00093481	-1.7065	-0.0009562	-0.038173	-2.139E-05	560.3391894187363	89.567	3.3537	89.494	86.948	90.302	-0.07238					131	78	3	0	0	0	0.70553	1	9366	9366		44.377	3.599	1	1075700			58194	3745	38859	38875	66021	66021					0.11133659085908221
TKTKKQTTLA	10	Unmodified	_TKTKKQTTLA_					0	0	0		ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;chr17:40392737-40396283|45|20.71|0.05|8.64|-|2|TOP2A,TOP2A|3	ENSG00000131747|ENST00000423485|TOP2A	ENSG00000131747|ENST00000423485|TOP2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3402099609375	2	560.340238	1118.66592	0.37477	0.00021	-0.52991	-0.00029693	-0.15514	-8.6932E-05	560.3398544470892	89.255	3.3389	89.463	87.161	90.5	0.2073					181	78	4	0	0	0	0.86802	1	8911	8911		27.047	1.4733	1	715790			58195	3745	38859	38875	66022	66022					0.11133659085908221
TKTMSVALVL	10	Unmodified	_TKTMSVALVL_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8165283203125	2	531.81501	1061.61547	1.0296	0.00054754	2.4741	0.0013157	3.5036	0.0018633	531.8162288809518	86.411	2.9296	86.467	84.628	87.558	0.055649					178	67	3	0	0	0	0.86106	1	8827	8827		33.922	5.6674	1	1241100	+		58196	15493	38860	38876	66023	66023					0.0871241343654674
TKTMSVALVL	10	Unmodified	_TKTMSVALVL_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8167724609375	2	531.81501	1061.61547	0.70533	0.00037511	2.7047	0.0014384	3.41	0.0018135	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.86272	1	8542	8542		24.519	4.0374	1	1163300	+		58197	15493	38860	38876	66024	66024					0.0871241343654674
TKTQRGPLSE	10	Unmodified	_TKTQRGPLSE_					0	0	0		ENST00000451868.2_1_12:123484929-123519149:-|nuORF	ENST00000451868.2_1_12:123484929-123519149:-|nuORF	ENST00000451868.2_1_12:123484929-123519149:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8027954101562	2	558.80402	1115.59349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.015	1	31.004	30.504	31.504	-0.010656								0	0	0	0.45132	1	1665	1665		29.17	0.020503	1				58198	11906	38861	38877	66025	66025					0.04031325012351772
TKTSQLTLQ	9	Unmodified	_TKTSQLTLQ_					0	0	0		chr12:27026534-27027349|15|11.47|0.36|5.01|+|0|MED21,None|1	chr12:27026534-27027349|15|11.47|0.36|5.01|+|0|MED21,None|1	chr12:27026534-27027349|15|11.47|0.36|5.01|+|0|MED21,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.28955078125	2	510.290214	1018.56587	0.9139	0.00046635	-0.57939	-0.00029566	0.33451	0.0001707	510.289869159266	16.729	0.51732	16.118	16.003	16.52	-0.6107					16	11	2	0	0	0	0.44421	1	177	177		54.776	0.053964	1	160730			58199	127	38862	38878	66026	66026					0.057334217520860875
TKTSQLTLQ	9	Unmodified	_TKTSQLTLQ_					0	0	0		chr12:27026534-27027349|15|11.47|0.36|5.01|+|0|MED21,None|1	chr12:27026534-27027349|15|11.47|0.36|5.01|+|0|MED21,None|1	chr12:27026534-27027349|15|11.47|0.36|5.01|+|0|MED21,None|1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	510.290214	1018.56587	0.67808	0.00034602	-0.86404	-0.00044091	-0.18595	-9.4889E-05	510.2897731406001	16.744	0.4302	16.257	16.098	16.528	-0.48718	0.069105	-6.9621E-05	NaN	54.776	15	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129030			58200	127	38862	38878							0.057334217520860875
TKTSRGNT	8	Unmodified	_TKTSRGNT_					0	0	0			REV__ENST00000427178.1_1_2:110843091-110843184:-|nuORF	REV__ENST00000427178.1_1_2:110843091-110843184:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.24609375	2	432.730323	863.446094	-0.16981	-7.3482E-05	3.5184	0.0015225	3.3486	0.001449	432.7317445737055	98.578	1.2247	98.628	98.131	99.355	0.04982					49	27	2	0	0	0	0.4196	1	10379	10379		15.642	0	1	51224	+		58201	26559	38863	38879	66027	66027					0.00890853198188779
TKTYGRNKIMT	11	Unmodified	_TKTYGRNKIMT_					0	0	0		ENSG00000163751|ENST00000296046|CPA3	ENSG00000163751|ENST00000296046|CPA3	ENSG00000163751|ENST00000296046|CPA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.23980712890625	3	438.239578	1311.69691	-1.2709	-0.00055695	1.9174	0.00084028	0.64653	0.00028333	438.2402874427309	72.883	0.77341	73.269	72.917	73.69	0.38581					52	18	4	0	0	0	0.66858	1	8166	8166		36.528	2.027	1	1069800			58202	5860	38864	38880	66028	66028					0.05352489128472371
TKTYGRNKIMT	11	Unmodified	_TKTYGRNKIMT_					0	0	0		ENSG00000163751|ENST00000296046|CPA3	ENSG00000163751|ENST00000296046|CPA3	ENSG00000163751|ENST00000296046|CPA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.23980712890625	3	438.239578	1311.69691	0.25649	0.00011241	0.2364	0.0001036	0.49289	0.000216	438.23956608955586	72.685	0.89092	73.239	72.902	73.792	0.55386					58	21	4	0	0	0	0.51578	2	8175	8163;8175		50.791	21.546	1	1114800			58203	5860	38864	38880	66029;66030	66030					0.05352489128472371
TKVAEAKK	8	Unmodified	_TKVAEAKK_					0	0	0		ENSG00000178105|ENST00000322536|DDX10	ENSG00000178105|ENST00000322536|DDX10	ENSG00000178105|ENST00000322536|DDX10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7713317871094	2	437.77146	873.528367	0.18916	8.281E-05	-0.44353	-0.00019417	-0.25437	-0.00011136	437.77124644611854	39.786	1.476	39.875	39.186	40.662	0.088375					62	41	2	0	0	0	0.81897	1	2454	2454		20.947	4.4738	1	3151300			58204	7184	38865	38881	66031	66031					0.08654375277126292
TKVDIDHDEML	11	Unmodified	_TKVDIDHDEML_					0	0	0			REV__nc|ENSG00000129317|Q9H0K6-2|PUS7L	REV__nc|ENSG00000129317|Q9H0K6-2|PUS7L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2585754394531	3	439.211465	1314.61257	1.3097	0.00057521	0.77997	0.00034257	2.0896	0.00091779	439.2124678284152	31.229	0.26479	31.218	31.001	31.266	-0.010656					9	5	2	0	0	0	0.17705	1	1678	1678		25.892	16.68	1	17617	+		58205	18818	38866	38882	66032	66032					-0.032155064789549215
TKVDKLQEP	9	Unmodified	_TKVDKLQEP_					0	0	0		nc|ENSG00000077092|P10826-3|RARB;ENSG00000077092|ENST00000330688|RARB;nc|ENSG00000077092|P10826|RARB;chr3:25174575-25461193|47|126.62|0.94|7.08|+|ENST00000383772|RARB,RARB	nc|ENSG00000077092|P10826-3|RARB	nc|ENSG00000077092|P10826-3|RARB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.3032836914062	2	529.298039	1056.58152	-0.42214	-0.00022344	4.0479	0.0021425	3.6257	0.0019191	529.2999611674875	58.584	1.1615	58.977	58.566	59.728	0.39209					60	27	3	0	0	0	0.51592	1	6106	6106		51.193	3.5354	1	1279600			58206	402	38867	38883	66033	66033					0.0554970826913177
TKVGIIGTS	9	Unmodified	_TKVGIIGTS_					0	0	0			REV__ENST00000543995.5_1_12:6442265-6443279:-|nuORF	REV__ENST00000543995.5_1_12:6442265-6443279:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2630310058594	2	438.263468	874.512382	-1.8646	-0.00081717	1.0768	0.00047194	-0.78773	-0.00034523	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.78983	1	2783	2783		27.882	2.4321	1	3384400	+		58207	28509	38868	38884	66034	66034					0.07010669040232642
TKVGIIGTS	9	Unmodified	_TKVGIIGTS_					0	0	0			REV__ENST00000543995.5_1_12:6442265-6443279:-|nuORF	REV__ENST00000543995.5_1_12:6442265-6443279:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2627258300781	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.7932	1	2839	2839		20.947	0	1	21381000	+		58208	28509	38868	38884	66035	66035					0.07010669040232642
TKVGLPPL	8	Unmodified	_TKVGLPPL_					0	0	0		nc|ENSG00000138029|P55084-2|HADHB;ENSG00000138029|ENST00000317799|HADHB	nc|ENSG00000138029|P55084-2|HADHB	nc|ENSG00000138029|P55084-2|HADHB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2669372558594	2	412.765646	823.516739	-1.9219	-0.00079331	4.3059	0.0017773	2.384	0.00098404	412.7679215648224	37.584	5.8846	37.584	33.576	39.461	0					274	149	4	0	0	0	0.86791	1	2456	2456		28.254	1.4582	1	1649400			58209	4256	38869	38885	66036	66036					0.09792178253792372
TKVGQLQP	8	Unmodified	_TKVGQLQP_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3003234863281	2	435.75581	869.497067	-1.3559	-0.00059085	-0.014466	-6.3038E-06	-1.3704	-0.00059715	435.75575823464175	74.95	0.88845	75.038	74.536	75.424	0.087631					30	25	2	0	0	0	0.4196	1	6903	6903		20.947	0	1	81486	+		58210	23707	38870	38886	66037	66037					0.057098022430295714
TKVHVKLY	8	Unmodified	_TKVHVKLY_					0	0	0			REV__ENSG00000100105|ENST00000266269|PATZ1	REV__ENSG00000100105|ENST00000266269|PATZ1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3024597167969	2	494.302927	986.591301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.909	1	15.826	15.326	16.326	-0.083363								0	0	0	0.30125	1	91	91		20.482	0	1		+		58211	17138	38871	38887	66038	66038					0.09746941065168357
TKVKKKAM	8	Unmodified	_TKVKKKAM_					0	0	0			REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.3005676269531	2	467.29933	932.584108	-0.1157	-5.4066E-05	3.2971	0.0015407	3.1814	0.0014867	467.30076139553194	93.209	1.4678	93.279	92.799	94.266	0.06987					90	34	4	0	0	0	0.79929	1	9673	9673		18.324	4.5491	1	872180	+		58212	20831	38872	38888	66039	66039					0.11511885193101534
TKVKKKAM	8	Unmodified	_TKVKKKAM_					0	0	0			REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	467.29933	932.584108	-1.0318	-0.00048215	4.4248	0.0020677	3.393	0.0015856	467.30127579151804	93.46	1.2832	93.46	93.025	94.308	0	0.2735	0.00091822	NaN	18.324	58	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	261730	+		58213	20831	38872	38888							0.11511885193101534
TKVKKKAM	8	Unmodified	_TKVKKKAM_					0	0	0			REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	467.29933	932.584108	-0.1157	-5.4066E-05	3.2971	0.0015407	3.1814	0.0014867	467.30076139553194	93.209	1.4678	93.279	92.799	94.266	0.06987	0.092029	-0.00013575	NaN	18.324	90	34	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	872180	+		58214	20831	38872	38888							0.11511885193101534
TKVKKKAM	8	Unmodified	_TKVKKKAM_					0	0	0			REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	467.29933	932.584108	1.7541	0.00081967	1.2748	0.00059572	3.0289	0.0014154	467.299823181147	93.122	1.5499	93.061	92.634	94.184	-0.061432	-0.12569	-0.0020257	NaN	18.324	98	36	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1225700	+		58215	20831	38872	38888							0.11511885193101534
TKVKKKAM	8	Unmodified	_TKVKKKAM_					0	0	0			REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	467.29933	932.584108	0.28107	0.00013134	2.7898	0.0013037	3.0709	0.001435	467.30052632547023	93.006	1.4696	93.052	92.582	94.052	0.045456	-0.13506	-0.00060981	NaN	18.324	88	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1064900	+		58216	20831	38872	38888							0.11511885193101534
TKVKKKAM	8	Unmodified	_TKVKKKAM_					0	0	0			REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	467.29933	932.584108	-0.99542	-0.00046516	4.3022	0.0020104	3.3068	0.0015453	467.30123830205963	92.886	1.4142	93.111	92.62	94.034	0.22548	-0.075327	0.00080366	NaN	18.324	78	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	863920	+		58217	20831	38872	38888							0.11511885193101534
TKVKKKAM	8	Unmodified	_TKVKKKAM_					0	0	0			REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	467.29933	932.584108	-1.7215	-0.00080444	5.0138	0.002343	3.2924	0.0015385	467.3016280421081	93.008	1.3865	93.2	92.648	94.035	0.19239	0.013793	0.0014687	NaN	18.324	77	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	520640	+		58218	20831	38872	38888							0.11511885193101534
TKVKKKAM	8	Unmodified	_TKVKKKAM_					0	0	0			REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	467.29933	932.584108	0.93185	0.00043545	2.9125	0.001361	3.8443	0.0017965	467.30061174405967	92.741	1.1753	93.187	92.819	93.994	0.44662	0.00064244	-0.00049517	NaN	18.324	44	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	273340	+		58219	20831	38872	38888							0.11511885193101534
TKVKKKAM	8	Unmodified	_TKVKKKAM_					0	0	0			REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	467.29933	932.584108	-0.84734	-0.00039596	4.6277	0.0021625	3.7803	0.0017665	467.3013809035478	92.752	1.0026	93.202	92.904	93.907	0.44988	0.014993	0.0011078	NaN	18.324	53	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	366680	+		58220	20831	38872	38888							0.11511885193101534
TKVKKRHVDP	10	Unmodified	_TKVKKRHVDP_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3662719726562	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.8651	1	12837	12837		25.574	11.437	1	5984800			58221	7631	38873	38889	66040	66040					0.12459876308275852
TKVLALPP	8	Unmodified	_TKVLALPP_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7747802734375	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.90465	4	3150	3126;3138;3150;3162		50.025	8.6178	1	10965000	+		58222	27800	38874	38890	66041;66042;66043;66044	66043					0.10712464770847419
TKVLALPP	8	Unmodified	_TKVLALPP_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77484130859375	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.87922	4	3201	3201;3223;3235;3247		40.573	8.6178	1	11423000	+		58223	27800	38874	38890	66045;66046;66047;66048	66045					0.10712464770847419
TKVLALPP	8	Unmodified	_TKVLALPP_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7747802734375	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.84341	3	3161	3149;3161;3173		50.025	9.4519	1	10266000	+		58224	27800	38874	38890	66049;66050;66051	66050					0.10712464770847419
TKVLALPP	8	Unmodified	_TKVLALPP_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.77484130859375	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.88915	4	2809	2785;2797;2809;2819		47.916	12.715	1	10440000	+		58225	27800	38874	38890	66052;66053;66054;66055	66054					0.10712464770847419
TKVLALPP	8	Unmodified	_TKVLALPP_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.7748718261719	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.90465	2	2792	2792;2813		40.573	8.6178	1	9723800	+		58226	27800	38874	38890	66056;66057	66056					0.10712464770847419
TKVLALPPI	9	Unmodified	_TKVLALPPI_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.31500244140625	2	476.315503	950.616454	-0.38261	-0.00018224	2.7642	0.0013166	2.3816	0.0011344	476.3167695598972	33.561	0.92266	33.505	33.25	34.173	-0.056385					30	20	2	0	0	0	0.7932	1	2056	2056		24.203	6.8378	1	81153	+		58227	27800	38875	38891	66058	66058					0.13916995867759852
TKVLALPPI	9	Unmodified	_TKVLALPPI_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	476.315503	950.616454	-1.8563	-0.00088419	5.1636	0.0024595	3.3073	0.0015753	476.31758650712754	33.409	1.0133	33.409	33.196	34.209	0	0.027658	0.0015973	NaN	24.203	52	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80188	+		58228	27800	38875	38891							0.13916995867759852
TKVLALPPI	9	Unmodified	_TKVLALPPI_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	476.315503	950.616454	-0.38261	-0.00018224	2.7642	0.0013166	2.3816	0.0011344	476.3167695598972	33.561	0.92266	33.505	33.25	34.173	-0.056385	0.12353	-0.00068844	NaN	24.203	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81153	+		58229	27800	38875	38891							0.13916995867759852
TKVLALPPI	9	Unmodified	_TKVLALPPI_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	476.315503	950.616454	-1.5134	-0.00072084	3.9587	0.0018856	2.4453	0.0011647	476.3173011882813	33.313	0.83701	33.312	33.123	33.96	-0.0016327	-0.069984	0.00044947	NaN	24.203	25	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36899	+		58230	27800	38875	38891							0.13916995867759852
TKVLALPPI	9	Unmodified	_TKVLALPPI_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	476.315503	950.616454	-0.97208	-0.00046302	3.9991	0.0019048	3.0271	0.0014418	476.3173954345429	33.324	0.35644	33.37	33.266	33.623	0.045849	-0.011375	0.00048801	NaN	24.203	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51473	+		58231	27800	38875	38891							0.13916995867759852
TKVLALPPI	9	Unmodified	_TKVLALPPI_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	476.315503	950.616454	0.25361	0.0001208	2.4046	0.0011454	2.6582	0.0012661	476.31650663059264	33.246	0.39082	33.213	33.088	33.479	-0.032681	-0.16809	-0.001031	NaN	24.203	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57917	+		58232	27800	38875	38891							0.13916995867759852
TKVPEEIP	8	Unmodified	_TKVPEEIP_					0	0	0		nc|ENSG00000188199|A6NNL0-2|NUTM2B;nc|ENSG00000184923|Q8IVF1-2|NUTM2A;ENSG00000214562|ENST00000381697|NUTM2D;ENSG00000228570|ENST00000429984|NUTM2E;ENSG00000188199|ENST00000429828|NUTM2B;ENSG00000184923|ENST00000381707|NUTM2A;ENSG00000130950|ENST00000253262|NUTM2F;ENSG00000188152|ENST00000372322|NUTM2G;nc|ENSG00000188152|Q5VZR2-2|NUTM2G	nc|ENSG00000188199|A6NNL0-2|NUTM2B;ENSG00000130950|ENST00000253262|NUTM2F	ENSG00000130950|ENST00000253262|NUTM2F	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.9422912597656	2	456.755475	911.496398	-1.1377	-0.00051967	4.3049	0.0019663	3.1672	0.0014466	456.75723013102873	63.593	3.0612	63.979	62.577	65.638	0.3868					102	71	2	0	0	0	0.4196	1	6969	6969		16.473	0	1	95944			58233	3700;7655	38876	38892	66059	66059					0.037109628033249464
TKVPLLLE	8	Unmodified	_TKVPLLLE_					0	0	0		ENSG00000138686|ENST00000264499|BBS7	ENSG00000138686|ENST00000264499|BBS7	ENSG00000138686|ENST00000264499|BBS7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.791748046875	2	456.791861	911.569169	-0.73784	-0.00033704	3.4705	0.0015853	2.7326	0.0012482	456.79333098184276	49.768	2.9671	49.744	48.401	51.368	-0.024029					154	74	4	0	0	0	0.85277	1	4310	4310		25.45	0	1	161210			58234	4318	38877	38893	66060	66060					0.10984716596749422
TKVQRITVRAH	11	Unmodified	_TKVQRITVRAH_					0	0	0			REV__ENSG00000256394|ENST00000537611|ASIC5	REV__ENSG00000256394|ENST00000537611|ASIC5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.9346618652344	3	436.933477	1307.7786	0.49799	0.00021759	0.62254	0.00027201	1.1205	0.0004896	436.93369927878706	20.732	2.5953	20.273	19.595	22.19	-0.4591					152	59	4	0	0	0	0.73647	1	648	648		25.068	6.5367	1	492360	+		58235	23907	38878	38894	66061	66061					0.1370235260260415
TKVRLLRLRN	10	Unmodified	_TKVRLLRLRN_					0	0	0		ENSG00000182472|ENST00000328867|CAPN12	ENSG00000182472|ENST00000328867|CAPN12	ENSG00000182472|ENST00000328867|CAPN12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	423.5975646972656	3	423.613967	1267.82007	0.73388	0.00031088	-3.3384	-0.0014142	-2.6045	-0.0011033	423.6127078878797	105.3	0.2327	105.41	105.23	105.47	0.10766					6	5	2	0	0	0	0.37624	1	11220	11220		14.086	8.3872	1	32112			58236	7457	38879	38895	66062	66062					0.19687533361934584
TKVRSVSH	8	Unmodified	_TKVRSVSH_					0	0	0			REV__nc|ENSG00000118058|Q03164-2|KMT2A	REV__nc|ENSG00000118058|Q03164-2|KMT2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79315185546875	2	457.264333	912.514114	-0.89531	-0.00040939	1.431	0.00065434	0.53567	0.00024494	457.2649197560906	36.826	0.66862	36.772	36.337	37.005	-0.053558					19	14	2	0	0	0	0.4196	1	2446	2446		21.96	2.5999	1	59614	+		58237	18291	38880	38896	66063	66063					0.05435722848858404
TKVSIKKAGSD	11	Unmodified	_TKVSIKKAGSD_					0	0	0			REV__ENSG00000128849|ENST00000281282|CGNL1	REV__ENSG00000128849|ENST00000281282|CGNL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3302612304688	2	567.32987	1132.64519	-1.2008	-0.00068122	1.5929	0.00090372	0.39219	0.0002225	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.7144	1	9160	9160		29.17	0	1	5763000	+		58238	18796	38881	38897	66064	66064					0.08417068706239661
TKVSIKKAGSD	11	Unmodified	_TKVSIKKAGSD_					0	0	0			REV__ENSG00000128849|ENST00000281282|CGNL1	REV__ENSG00000128849|ENST00000281282|CGNL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.329833984375	2	567.32987	1132.64519	0.79571	0.00045143	-1.0349	-0.00058711	-0.23916	-0.00013568	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.67778	1	9391	9391		35.152	7.0705	1	18145000	+		58239	18796	38881	38897	66065	66065					0.08417068706239661
TKVSIKKAGSD	11	Unmodified	_TKVSIKKAGSD_					0	0	0			REV__ENSG00000128849|ENST00000281282|CGNL1	REV__ENSG00000128849|ENST00000281282|CGNL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.32958984375	2	567.32987	1132.64519	-1.3957	-0.00079181	1.2535	0.00071113	-0.14221	-8.0679E-05	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.72106	1	9382	9382		28.081	0.19925	1	17338000	+		58240	18796	38881	38897	66066	66066					0.08417068706239661
TKVSSYPVALI	11	Unmodified	_TKVSSYPVALI_					0	0	0		nc|ENSG00000130024|Q8WUB8-3|PHF10;ENSG00000130024|ENST00000339209|PHF10;ENST00000452540.1_1_X:154522213-154522408:+|nuORF;nc|ENSG00000130024|Q8WUB8-2|PHF10	nc|ENSG00000130024|Q8WUB8-3|PHF10	nc|ENSG00000130024|Q8WUB8-3|PHF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3431396484375	2	589.344989	1176.67542	-1.324	-0.0007803	-2.248	-0.0013248	-3.572	-0.0021051	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.65746	1	9879	9879		37.812	1.3648	1	17904000			58241	3616	38882	38898	66067	66067					0.09415427371436635
TKVTDWTH	8	Unmodified	_TKVTDWTH_					0	0	0			REV__ENST00000483722.1_1_6:41159156-41159447:-|nuORF	REV__ENST00000483722.1_1_6:41159156-41159447:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.2482604980469	2	494.248349	986.482145	0.22534	0.00011137	-0.15132	-7.479E-05	0.074015	3.6582E-05	494.2481452855728	60.567	0.76367	60.534	60.174	60.938	-0.032509					55	21	4	0	0	0	0.88944	1	5730	5730		57.811	0	1	1135100	+		58242	27498	38883	38899	66068	66068					-0.01163689624968356
TKVWQLLLPPA	11	Unmodified	_TKVWQLLLPPA_					0	0	0			REV__ENSG00000173846|ENST00000372201|PLK3	REV__ENSG00000173846|ENST00000372201|PLK3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.2284851074219	3	422.592058	1264.75434	1.349	0.00057006	-0.059885	-2.5307E-05	1.2891	0.00054476	422.591906226867	63.651	0.87538	63.678	63.267	64.143	0.027142					48	31	2	0	0	0	0.17606	1	6015	6015		25.126	1.7481	1	54386	+		58243	21956	38884	38900	66069	66069					0.13255699396381715
TKWLAKHV	8	Unmodified	_TKWLAKHV_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7951354980469	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.8347	1	4066	4066		23.042	0	1	1240000	+		58244	15467	38885	38901	66070	66070					0.08446074267988024
TKWLAKHV	8	Unmodified	_TKWLAKHV_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79583740234375	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.82658	1	4068	4068		21.96	0.25755	1	1111900	+		58245	15467	38885	38901	66071	66071					0.08446074267988024
TKWLAKHV	8	Unmodified	_TKWLAKHV_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957458496094	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.82658	1	3406	3406		21.96	0.25755	1	2747400	+		58246	15467	38885	38901	66072	66072					0.08446074267988024
TKWLAKHV	8	Unmodified	_TKWLAKHV_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7957458496094	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.86677	1	4198	4198		27.882	2.4321	1	412030	+		58247	15467	38885	38901	66073	66073					0.08446074267988024
TKWLAKHV	8	Unmodified	_TKWLAKHV_					0	0	0			REV__ENSG00000065328|ENST00000378714|MCM10	REV__ENSG00000065328|ENST00000378714|MCM10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7956237792969	2	491.795269	981.575986	-1.0095	-0.00049646	1.2929	0.00063585	0.28344	0.00013939	491.79577391563464	44.834	1.3425	45.297	44.375	45.717	0.46313					102	32	4	0	0	0	0.87479	1	4141	4141		30.504	2.2494	1	7709100	+		58248	15467	38885	38901	66074	66074					0.08446074267988024
TKWLIRGG	8	Unmodified	_TKWLIRGG_					0	0	0			REV__ENST00000439817.5_1_10:103573317-103578203:-|nuORF	REV__ENST00000439817.5_1_10:103573317-103578203:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7775573730469	2	465.779619	929.544686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.282	1	80.419	79.919	80.919	0.13702								0	0	0	0.2939	1	7637	7637		27.882	6.1799	1		+		58249	26733	38886	38902	66075	66075					0.07709501233910032
TKYDAPFVF	9	Unmodified	_TKYDAPFVF_					0	0	0		nc|ENSG00000198959|P21980-2|TGM2;ENST00000468262.5_1_20:36766485-36793648:-|nuORF;ENSG00000198959|ENST00000361475|TGM2	nc|ENSG00000198959|P21980-2|TGM2	nc|ENSG00000198959|P21980-2|TGM2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.1603393554688	2	544.276575	1086.5386	-1.3281	-0.00072285	-2.2913	-0.0012471	-3.6194	-0.0019699	544.2751536348732	46.294	0.5637	46.766	46.457	47.021	0.47139					27	13	3	0	0	0	0.20789	1	4337	4337		37.812	15.852	1	577920			58250	8380	38887	38903	66076	66076					-0.0012106178828616976
TKYIMNVF	8	Unmodified	_TKYIMNVF_					0	0	0			REV__ENSG00000069206|ENST00000175238|ADAM7	REV__ENSG00000069206|ENST00000175238|ADAM7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8077392578125	2	508.267696	1014.52084	0.84178	0.00042785	1.3271	0.00067454	2.1689	0.0011024	508.2682391085065	82.258	0.61691	82.732	82.471	83.088	0.47383					21	14	2	0	0	0	0.4196	1	9592	9592		12.959	0	1	196590	+		58251	16577	38888	38904	66077	66077					0.014158996852188466
TKYKKGKLR	9	Unmodified	_TKYKKGKLR_					0	0	0			REV__ENSG00000121957|ENST00000264126|GPSM2	REV__ENSG00000121957|ENST00000264126|GPSM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3636474609375	2	561.361308	1120.70806	-1.1522	-0.00064679	4.3288	0.00243	3.1766	0.0017832	561.3636203796618	43.91	1.2503	44.684	44.223	45.473	0.7738					84	30	4	0	0	0	0.78536	1	4016	4016		29.15	8.2026	1	1618600	+		58252	18474	38889	38905	66078	66078					0.15253679284933241
TKYLHGNV	8	Unmodified	_TKYLHGNV_					0	0	0			REV__nc|ENSG00000102755|P17948-3|FLT1	REV__nc|ENSG00000102755|P17948-3|FLT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2542419433594	2	466.253434	930.492316	-1.0712	-0.00049944	1.8894	0.00088094	0.81821	0.00038149	466.2541904327881	60.586	1.2512	60.686	59.935	61.186	0.10082					87	49	2	0	0	0	0.87064	1	5238	5238		29.15	1.2673	1	202870	+		58253	17351	38890	38906	66079	66079					0.024289181002927762
TKYLLLTSI	9	Unmodified	_TKYLLLTSI_					0	0	0		ENSG00000146802|ENST00000312814|TMEM168	ENSG00000146802|ENST00000312814|TMEM168	ENSG00000146802|ENST00000312814|TMEM168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3230590820312	2	526.323525	1050.6325	0.48631	0.00025596	1.9952	0.0010501	2.4815	0.0013061	526.3244623018427	62.826	0.99297	62.947	62.385	63.378	0.1209					77	46	2	0	0	0	0.7932	1	5515	5515		18.324	0	1	145820			58254	4858	38891	38907	66080	66080					0.10920657314022719
TKYRVIYK	8	Unmodified	_TKYRVIYK_					0	0	0			REV__ENSG00000111799|ENST00000322507|COL12A1	REV__ENSG00000111799|ENST00000322507|COL12A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.8228759765625	2	535.821484	1069.62842	0.011811	6.3284E-06	1.4904	0.00079858	1.5022	0.00080491	535.822094739274	50.903	1.5324	50.901	49.95	51.482	-0.0020447					75	42	4	0	0	0	0.87479	1	4325	4325		30.504	2.6214	1	199320	+		58255	17895	38892	38908	66081	66081					0.09638612610956443
TLAALALLSS	10	Unmodified	_TLAALALLSS_					0	0	0		ENSG00000117407|ENST00000372359|ARTN;nc|ENSG00000117407|Q5T4W7-3|ARTN;nc|ENSG00000117407|Q5T4W7-2|ARTN	ENSG00000117407|ENST00000372359|ARTN	ENSG00000117407|ENST00000372359|ARTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.28912353515625	2	480.292225	958.569897	0.27624	0.00013268	-0.074845	-3.5948E-05	0.2014	9.673E-05	480.29198602100877	29.951	0.61583	29.976	29.798	30.414	0.025013					19	14	2	0	0	0	0.85466	1	1533	1533		20.947	0.4651	1	35125			58256	2975	38893	38909	66082	66082					0.08895511245816579
TLADILLYY	9	Unmodified	_TLADILLYY_					0	0	0		ENSG00000124802|ENST00000379715|EEF1E1;nc|ENSG00000124802|O43324-2|EEF1E1	ENSG00000124802|ENST00000379715|EEF1E1	ENSG00000124802|ENST00000379715|EEF1E1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.7991943359375	2	542.799883	1083.58521	1.2343	0.00066999	-1.4114	-0.00076609	-0.17704	-9.6096E-05	542.7991222400209	103.47	1.0718	103.7	103.42	104.49	0.22556					41	25	2	0	0	0	0.19953	2	12607	12607;12618		73.975	16.163	1	542050			58257	3364	38894	38910	66083;66084	66083					0.04676378042995566
TLADVLVQ	8	Unmodified	_TLADVLVQ_					0	0	0		ENST00000417336.5_1_2:191224783-191231435:+|nuORF;ENST00000422454.5_1_2:191224783-191229864:+|nuORF;ENST00000487628.1_1_2:191224783-191227442:+|nuORF;ENSG00000151689|ENST00000392329|INPP1	ENST00000417336.5_1_2:191224783-191231435:+|nuORF	ENST00000417336.5_1_2:191224783-191231435:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.75030517578125	2	429.750193	857.485833	-1.7422	-0.0007487	2.3085	0.00099207	0.56632	0.00024338	429.7510562737313	35.44	2.4929	35.471	35.255	37.748	0.031132					176	69	3	0	0	0	0.93786	1	1886	1886		53.351	7.3995	1	1409200			58258	5135	38895	38911	66085	66085					0.05138980148922201
TLAFIVVK	8	Unmodified	_TLAFIVVK_					0	0	0		ENSG00000184571|ENST00000616349|PIWIL3;nc|ENSG00000184571|Q7Z3Z3|PIWIL3	ENSG00000184571|ENST00000616349|PIWIL3	ENSG00000184571|ENST00000616349|PIWIL3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	445.63592529296875	2	445.789121	889.56369	-0.066935	-2.9839E-05	2.2978	0.0010243	2.2309	0.00099451	445.78990861336644	39.614	0.57867	39.566	39.196	39.775	-0.04789					20	14	2	0	0	0	0.4196	1	2425	2425		7.1934	3.2081	1	41362			58259	7623	38896	38912	66086	66086					0.11449037804936779
TLAGLRSR	8	Unmodified	_TLAGLRSR_					0	0	0		ENST00000573075.5_1_17:1616216-1617149:-|nuORF;nc|ENSG00000186594|Q0VDD5|MIR22HG;ENST00000608913.5_1_17:1616268-1617149:-|nuORF;ENST00000575626.5_1_17:1616063-1617149:-|nuORF;ENST00000609398.5_1_17:1616063-1617149:-|nuORF	ENST00000573075.5_1_17:1616216-1617149:-|nuORF	ENST00000573075.5_1_17:1616216-1617149:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2656555175781	2	437.266876	872.519199	-0.37471	-0.00016385	-2.2126	-0.0009675	-2.5873	-0.0011313	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.88601	1	794	794		34.173	5.023	1	970200			58260	14016	38897	38913	66087	66087					0.0778402671146523
TLAGLSRR	8	Unmodified	_TLAGLSRR_					0	0	0			REV__ENST00000535240.1_1_17:68164927-68170986:+|nuORF	REV__ENST00000535240.1_1_17:68164927-68170986:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2638244628906	2	437.266876	872.519199	-2.1128	-0.00092385	-0.58974	-0.00025787	-2.7025	-0.0011817	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.87064	1	769	769		29.15	0	1	1366900	+		58261	28382	38898	38914	66088	66088					0.0778402671146523
TLAGLSRR	8	Unmodified	_TLAGLSRR_					0	0	0			REV__ENST00000535240.1_1_17:68164927-68170986:+|nuORF	REV__ENST00000535240.1_1_17:68164927-68170986:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2637023925781	2	437.266876	872.519199	0.72217	0.00031578	-3.1375	-0.0013719	-2.4154	-0.0010562	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.87922	1	743	743		31.955	0	1	944940	+		58262	28382	38898	38914	66089	66089					0.0778402671146523
TLALIQRFFV	10	Unmodified	_TLALIQRFFV_					0	0	0			REV__nc|ENSG00000090487|Q9NZD8-2|SPG21	REV__nc|ENSG00000090487|Q9NZD8-2|SPG21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.366455078125	2	604.363516	1206.71248	3.2045	0.0019367	1.6316	0.00098609	4.8361	0.0029228	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.86338	1	11811	11811		34.173	6.2903	1	63446000	+		58263	16988	38899	38915	66090	66090					0.11739143707836774
TLALIQRFFV	10	Unmodified	_TLALIQRFFV_					0	0	0			REV__nc|ENSG00000090487|Q9NZD8-2|SPG21	REV__nc|ENSG00000090487|Q9NZD8-2|SPG21	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3672485351562	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.38	1	113.36	112.86	113.86	-0.024811								0	0	0	0.45132	1	12544	12544		21.96	1.9631	1		+		58264	16988	38899	38915	66091	66091					0.11739143707836774
TLALIQRFFV	10	Unmodified	_TLALIQRFFV_					0	0	0			REV__nc|ENSG00000090487|Q9NZD8-2|SPG21	REV__nc|ENSG00000090487|Q9NZD8-2|SPG21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3662109375	2	604.363516	1206.71248	2.3603	0.0014265	2.8185	0.0017034	5.1787	0.0031298	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.86409	1	12652	12652		26.693	4.733	1	5984800	+		58265	16988	38899	38915	66092	66092					0.11739143707836774
TLALLQPL	8	Unmodified	_TLALLQPL_					0	0	0			REV__ENST00000230173.10_3_6:142623046-142623334:+|nuORF	REV__ENST00000230173.10_3_6:142623046-142623334:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2575378417969	2	434.778754	867.542954	-1.1823	-0.00051403	-1.4724	-0.00064018	-2.6547	-0.0011542	434.780506714103	88.473	1.7154	88.473	87.035	88.751	0					50	39	2	0	0	0	0.4196	1	8398	8398		19.36	0	1	70715	+		58266	24192	38900	38916	66093	66093					0.10388447425293634
TLALSVAKP	9	Unmodified	_TLALSVAKP_					0	0	0		ENST00000427280.6_1_2:217364074-217364681:+|nuORF	ENST00000427280.6_1_2:217364074-217364681:+|nuORF	ENST00000427280.6_1_2:217364074-217364681:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2803649902344	2	450.28166	898.548768	-2.8131	-0.0012667	0.44286	0.00019941	-2.3703	-0.0010673	450.28170462362806	41.642	0.68284	42.056	41.823	42.505	0.4139					35	17	3	0	0	0	0.69624	1	3665	3665		40.778	1.5253	1	1556700			58267	11571	38901	38917	66094	66094					0.09543545936946884
TLALTPTAS	9	Unmodified	_TLALTPTAS_					0	0	0		ENST00000242108.8_1_7:36192794-36192971:+|nuORF	ENST00000242108.8_1_7:36192794-36192971:+|nuORF	ENST00000242108.8_1_7:36192794-36192971:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2638244628906	2	437.74765	873.480748	-2.1176	-0.00092699	-4.439	-0.0019432	-6.5567	-0.0028702	437.7462493054567	23.83	0.068882	23.83	23.792	23.861	0					4	2	2	0	0	0	0.20789	1	769	769		26.693	1.2427	1	7013.8			58268	9252	38902	38918	66095	66095					0.03894676286267895
TLANVSAVNY	10	Unmodified	_TLANVSAVNY_					0	0	0		nc|ENSG00000196730|P53355-4|DAPK1;ENSG00000196730|ENST00000408954|DAPK1;nc|ENSG00000196730|P53355-3|DAPK1;ENST00000469067.5_1_9:90113992-90265069:+|nuORF	nc|ENSG00000196730|P53355-4|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2786865234375	2	526.274564	1050.53457	0.42062	0.00022136	-0.48454	-0.000255	-0.063922	-3.364E-05	526.2742119410344	55.335	0.74729	55.903	55.616	56.363	0.56836					42	17	3	0	0	0	0.60985	1	5668	5668		49.536	1.5765	1	1627500			58269	8097	38903	38919	66096	66096					0.011328487179980584
TLARKGGN	8	Unmodified	_TLARKGGN_					0	0	0			REV__ENSG00000120071|ENST00000432791|KANSL1	REV__ENSG00000120071|ENST00000432791|KANSL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7396545410156	2	408.737951	815.46135	0.14715	6.0146E-05	4.0233	0.0016445	4.1704	0.0017046	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.89494	1	1898	1898		37.159	7.3176	1	1448600	+		58270	18397	38904	38920	66097	66097					0.04623764786049378
TLARKGGN	8	Unmodified	_TLARKGGN_					0	0	0			REV__ENSG00000120071|ENST00000432791|KANSL1	REV__ENSG00000120071|ENST00000432791|KANSL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.7397155761719	2	408.737951	815.46135	1.5082	0.00061648	2.9117	0.0011901	4.4199	0.0018066	408.739095634202	34.891	2.006	35.101	34.812	36.818	0.21003					151	50	4	0	0	0	0.91472	2	2648	2636;2648		45.952	7.1458	1	5089300	+		58271	18397	38904	38920	66098;66099	66099					0.04623764786049378
TLARKGGN	8	Unmodified	_TLARKGGN_					0	0	0			REV__ENSG00000120071|ENST00000432791|KANSL1	REV__ENSG00000120071|ENST00000432791|KANSL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.73980712890625	2	408.737951	815.46135	1.2573	0.00051389	3.1459	0.0012858	4.4031	0.0017997	408.73920372763826	34.848	1.9965	35.229	34.977	36.973	0.3812					122	50	4	0	0	0	0.92457	1	2744	2744		47.916	14.4	1	5754800	+		58272	18397	38904	38920	66100	66100					0.04623764786049378
TLARSGRI	8	Unmodified	_TLARSGRI_					0	0	0		ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2667541503906	2	437.266876	872.519199	-2.1128	-0.00092385	-0.58974	-0.00025787	-2.7025	-0.0011817	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.7961	2	866	806;866		29.15	0	1	1366900			58273	12973	38905	38921	66101;66102	66102					0.0778402671146523
TLARSGRI	8	Unmodified	_TLARSGRI_					0	0	0		ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2655944824219	2	437.266876	872.519199	0.61137	0.00026733	-3.2	-0.0013992	-2.5886	-0.0011319	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.9283	1	862	862		49.442	5.3247	1	1313200			58274	12973	38905	38921	66103	66103					0.0778402671146523
TLARSGRI	8	Unmodified	_TLARSGRI_					0	0	0		ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2655944824219	2	437.266876	872.519199	-0.37471	-0.00016385	-2.2126	-0.0009675	-2.5873	-0.0011313	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.88601	2	767	752;767		44.117	10.601	1	970200			58275	12973	38905	38921	66104;66105	66105					0.0778402671146523
TLARSGRI	8	Unmodified	_TLARSGRI_					0	0	0		ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2656555175781	2	437.266876	872.519199	-0.36504	-0.00015962	-2.3712	-0.0010368	-2.7362	-0.0011965	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.93786	1	952	952		53.351	2.016	1	1300600			58276	12973	38905	38921	66106	66106					0.0778402671146523
TLARSGRI	8	Unmodified	_TLARSGRI_					0	0	0		ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2655944824219	2	437.266876	872.519199	1.7622	0.00077054	-4.3406	-0.001898	-2.5785	-0.0011275	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.89043	2	922	899;922		44.117	1.7207	1	1079000			58277	12973	38905	38921	66107;66108	66108					0.0778402671146523
TLARSGRI	8	Unmodified	_TLARSGRI_					0	0	0		ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2655944824219	2	437.266876	872.519199	-1.6274	-0.00071159	-1.0909	-0.00047703	-2.7183	-0.0011886	437.2663457196616	22.467	1.2654	22.516	22.142	23.407	0.048553					168	64	5	0	0	0	0.90523	1	677	677		40.778	1.972	1	1779900			58278	12973	38905	38921	66109	66109					0.0778402671146523
TLARSGRI	8	Unmodified	_TLARSGRI_					0	0	0		ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2654113769531	2	437.266876	872.519199	-1.6247	-0.00071044	-1.1033	-0.00048243	-2.728	-0.0011929	437.26636390033156	24.021	1.8701	24.079	23.417	25.287	0.058165					191	86	4	0	0	0	0.87479	1	813	813		30.504	1.3541	1	2248600			58279	12973	38905	38921	66110	66110					0.0778402671146523
TLARSGRI	8	Unmodified	_TLARSGRI_					0	0	0		ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2657775878906	2	437.266876	872.519199	0.044355	1.9395E-05	-2.8438	-0.0012435	-2.7995	-0.0012241	437.26562029129207	23.787	1.9639	23.882	23.206	25.169	0.094501					226	94	5	0	0	0	0.89494	1	799	799		37.159	0	1	2622700			58280	12973	38905	38921	66111	66111					0.0778402671146523
TLARSGRI	8	Unmodified	_TLARSGRI_					0	0	0		ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26556396484375	2	437.266876	872.519199	0.27465	0.0001201	-3.2994	-0.0014427	-3.0248	-0.0013226	437.2655143696572	24.107	1.3602	23.725	23.153	24.514	-0.38178					100	30	5	0	0	0	0.89962	2	1115	1115;1138		53.351	2.016	1	12963000			58281	12973	38905	38921	66112;66113	66112					0.0778402671146523
TLARSGRI	8	Unmodified	_TLARSGRI_					0	0	0		ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	ENST00000508243.5_1_4:159131615-159132640:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2655944824219	2	437.266876	872.519199	0.051124	2.2355E-05	-3.1793	-0.0013902	-3.1282	-0.0013678	437.26563820123806	25.538	2.1653	25.281	24.501	26.666	-0.25721					170	48	6	0	0	0	0.91472	2	1330	1330;1354		53.351	2.016	1	21512000			58282	12973	38905	38921	66114;66115	66114					0.0778402671146523
TLASLGRR	8	Unmodified	_TLASLGRR_					0	0	0			REV__ENST00000379982.7_1_5:95067366-95067693:+|nuORF	REV__ENST00000379982.7_1_5:95067366-95067693:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2657775878906	2	437.266876	872.519199	0.72217	0.00031578	-3.1375	-0.0013719	-2.4154	-0.0010562	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.84341	1	719	719		24.203	0	1	944940	+		58283	25935	38906	38922	66116	66116					0.0778402671146523
TLASLGRRGT	10	Unmodified	_TLASLGRRGT_					0	0	0			REV__ENST00000379982.7_1_5:95067366-95067693:+|nuORF	REV__ENST00000379982.7_1_5:95067366-95067693:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3010864257812	2	516.301447	1030.58834	-0.029363	-1.516E-05	-1.5847	-0.0008182	-1.6141	-0.00083336	516.3013663532613	57.234	1.5278	57.221	56.762	58.289	-0.012203					115	51	4	0	0	0	0.80179	1	5170	5170		39.253	0.44669	1	678400	+		58284	25935	38907	38923	66117	66117					0.07427065940373723
TLASLKSN	8	Unmodified	_TLASLKSN_					0	0	0			REV__ENSG00000113716|ENST00000502717|HMGXB3	REV__ENSG00000113716|ENST00000502717|HMGXB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.239501953125	2	417.239993	832.465432	-0.18702	-7.8031E-05	-1.9097	-0.00079681	-2.0967	-0.00087484	417.23903257482436	88.499	3.1931	88.567	87.962	91.155	0.068161					142	75	3	0	0	0	0.87922	1	9018	9018		31.955	1.4512	1	1475100	+		58285	18008	38908	38924	66118	66118					0.042498094890902394
TLATKLRFS	9	Unmodified	_TLATKLRFS_					0	0	0			REV__nc|ENSG00000189042|Q8N184-2|ZNF567	REV__nc|ENSG00000189042|Q8N184-2|ZNF567	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.810791015625	2	518.811116	1035.60768	1.9509	0.0010121	-3.6295	-0.001883	-1.6786	-0.0008709	518.8092395464859	98.349	1.5218	98.712	98.319	99.841	0.36308					101	37	4	0	0	0	0.6204	1	11866	11866		45.972	1.8554	1	12004000	+		58286	23056	38909	38925	66119	66119					0.09130022231283874
TLAVNIPP	8	Unmodified	_TLAVNIPP_					0	0	0		nc|ENSG00000136478|Q8IWB9-2|TEX2;ENSG00000136478|ENST00000584379|TEX2;ENST00000584498.5_1_17:62228191-62232353:-|nuORF	nc|ENSG00000136478|Q8IWB9-2|TEX2	nc|ENSG00000136478|Q8IWB9-2|TEX2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7459716796875	2	412.747453	823.480354	0.52297	0.00021586	-3.3456	-0.0013809	-2.8226	-0.001165	412.7459654434172	84.856	2.6272	85.296	84.303	86.93	0.43967					94	64	3	0	0	0	0.84341	1	9898	9898		24.203	1.1603	1	635870			58287	4113	38910	38926	66120	66120					0.06155301357091503
TLAYLNIV	8	Unmodified	_TLAYLNIV_					0	0	0		nc|ENSG00000013561|Q9UBS8-2|RNF14;ENSG00000013561|ENST00000394520|RNF14	nc|ENSG00000013561|Q9UBS8-2|RNF14	nc|ENSG00000013561|Q9UBS8-2|RNF14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.766357421875	2	453.768386	905.522219	-1.5185	-0.00068905	-3.2881	-0.001492	-4.8066	-0.0021811	453.766963530374	71.765	0.95408	72.149	71.628	72.582	0.38449					69	22	5	0	0	0	0.92973	1	7993	7993		50.025	0	1	869760			58288	810	38911	38927	66121	66121					0.0656785704561571
TLCCLVQFS	9	Unmodified	_TLCCLVQFS_					0	0	0			REV__ENSG00000169933|ENST00000675598|FRMPD4	REV__ENSG00000169933|ENST00000675598|FRMPD4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3078918457031	2	507.243363	1012.47217	1.6807	0.00085254	4.028	0.0020432	5.7087	0.0028957	507.2473432593809	28.608	0.38202	28.435	28.249	28.631	-0.17336					22	9	3	0	0	0	0.20789	1	1728	1728		30.318	0	1	76872	+		58289	21618	38912	38928	66122	66122					-0.0335633694619446
TLDDTVAEFV	10	Unmodified	_TLDDTVAEFV_					0	0	0		ENST00000561895.1_1_16:88718935-88721317:-|nuORF;ENST00000565149.5_1_16:88718935-88722722:-|nuORF;ENSG00000167508|ENST00000301012|MVD	ENST00000561895.1_1_16:88718935-88721317:-|nuORF	ENST00000561895.1_1_16:88718935-88721317:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.2742309570312	2	555.271687	1108.52882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.742	1	76.31	75.81	76.81	0.56836								0	0	0	0.45132	1	8608	8608		51.335	14.176	1				58290	6295	38913	38929	66123	66123					-0.021102945843495036
TLDFHTNTLY	10	Unmodified	_TLDFHTNTLY_					0	0	0		ENSG00000168702|ENST00000389484|LRP1B	ENSG00000168702|ENST00000389484|LRP1B	ENSG00000168702|ENST00000389484|LRP1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.8016357421875	2	612.798403	1223.58225	-0.26076	-0.0001598	0.12283	7.527E-05	-0.13794	-8.4526E-05	612.7983695527461	60.162	0.93864	60.163	59.86	60.798	0.00051498					65	32	3	0	0	0	0.3985	1	5180	5180		64.207	11.271	1	772020			58291	6428	38914	38930	66124	66124					-0.020594970817910507
TLDGAETPAL	10	Unmodified	_TLDGAETPAL_					0	0	0			REV__ENST00000533968.1_1_11:47397254-47399953:-|nuORF	REV__ENST00000533968.1_1_11:47397254-47399953:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.2539978027344	2	494.253297	986.492041	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.849	1	53.273	52.773	53.773	0.42348								0	0	0	0.45132	1	5312	5312		27.882	1.0861	1		+		58292	28360	38915	38931	66125	66125					-0.001745464102555161
TLDMLGWFY	9	Unmodified	_TLDMLGWFY_					0	0	0			REV__ENSG00000101542|ENST00000262717|CDH20	REV__ENSG00000101542|ENST00000262717|CDH20	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.2716674804688	2	573.270435	1144.52632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.937	1	47.912	47.412	48.412	-0.025513								0	0	0	0.30541	1	4026	4026		62.978	4.7485	1		+		58293	17287	38916	38932	66126	66126					-0.040164215229651745
TLDPEVVCRV	10	Unmodified	_TLDPEVVCRV_					0	0	0		ENSG00000124279|ENST00000264669|FASTKD3	ENSG00000124279|ENST00000264669|FASTKD3	ENSG00000124279|ENST00000264669|FASTKD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.794677734375	2	565.797349	1129.58014	0.55993	0.00031681	-3.0114	-0.0017038	-2.4514	-0.001387	565.7956122725219	67.048	0.93106	67.599	67.315	68.246	0.55071					51	25	3	0	0	0	0.67571	1	7379	7379		45.972	13.16	1	1292700			58294	3327	38917	38933	66127	66127					0.02053750908726215
TLEAMATKPDS	11	Unmodified	_TLEAMATKPDS_					0	0	0			REV__ENST00000496970.1_1_2:54950819-54951761:+|nuORF	REV__ENST00000496970.1_1_2:54950819-54951761:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353759765625	2	582.284271	1162.55399	3.1779	0.0018504	0.020814	1.212E-05	3.1987	0.0018626	582.2846615229776	103.63	0.35448	103.58	103.29	103.64	-0.043755					13	8	3	0	0	0	0.17415	1	11330	11330		33.922	8.3476	1	110350	+		58295	27759	38918	38934	66128	66128					-0.02078563053396465
TLELQHYHQLL	11	Unmodified	_TLELQHYHQLL_					0	0	0		ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENSG00000166986|ENST00000262027|MARS1	ENST00000537638.6_1_12:57905855-57911076:+|nuORF	ENST00000537638.6_1_12:57905855-57911076:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.5840759277344	3	465.585743	1393.7354	-1.1206	-0.00052173	-1.6718	-0.00077838	-2.7924	-0.0013001	465.58478300967374	38.693	0.82275	38.704	38.3	39.122	0.010708					48	23	3	0	0	0	0.72892	1	2296	2296		26.75	2.4738	1	219760			58296	6257	38919	38935	66129	66129					0.05428118034660656
TLEMYGHP	8	Unmodified	_TLEMYGHP_					0	0	0			REV__nc|ENSG00000117009|O15229-3|KMO	REV__nc|ENSG00000117009|O15229-3|KMO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2162780761719	2	474.218203	946.421853	0.3547	0.00016821	-2.2449	-0.0010646	-1.8902	-0.00089637	474.2168671819497	23.761	0.63369	23.187	22.878	23.512	-0.57415					33	14	3	0	0	0	0.88915	1	1077	1077		35.201	1.0282	1	380130	+		58297	18242	38920	38936	66130	66130					-0.053501232796861586
TLEPLLIK	8	Unmodified	_TLEPLLIK_					0	0	0			REV__ENST00000491554.6_1_15:40716399-40727929:+|nuORF	REV__ENST00000491554.6_1_15:40716399-40727929:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8009033203125	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.83646	1	3448	3448		12.207	0	1	279560	+		58298	27436	38921	38937	66131	66131					0.11905003113815837
TLESALIAL	9	Unmodified	_TLESALIAL_					0	0	0		nc|ENSG00000181090|Q9H9B1-4|EHMT1;ENST00000371394.6_1_9:140611085-140686569:+|nuORF;nc|ENSG00000181090|Q9H9B1-3|EHMT1;ENSG00000181090|ENST00000460843|EHMT1	nc|ENSG00000181090|Q9H9B1-4|EHMT1	nc|ENSG00000181090|Q9H9B1-4|EHMT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77752685546875	2	465.778951	929.543348	0.60386	0.00028126	-3.6343	-0.0016928	-3.0304	-0.0014115	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.69914	1	7823	7823		40.573	8.6178	1	1082300			58299	7372	38922	38938	66132	66132					0.07575822354453976
TLETLLRFL	9	Unmodified	_TLETLLRFL_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.33251953125	2	553.334424	1104.6543	-0.52136	-0.00028848	-2.9704	-0.0016436	-3.4917	-0.0019321	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.78058	1	9835	9835		30.504	1.3336	1	2365500			58300	1492	38923	38939	66133	66133					0.10615462062582992
TLFDVGGIFG	10	Unmodified	_TLFDVGGIFG_					0	0	0		ENSG00000160190|ENST00000352133|SLC37A1	ENSG00000160190|ENST00000352133|SLC37A1	ENSG00000160190|ENST00000352133|SLC37A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.28271484375	2	513.26875	1024.52295	0.68834	0.0003533	0.68486	0.00035152	1.3732	0.00070482	513.2689877127839	86.788	1.694	86.937	85.945	87.639	0.14902					51	39	2	0	0	0	0.37624	1	8477	8477		29.15	17.639	1	60467			58301	5560	38924	38940	66134	66134					0.011666516946661432
TLFKIDKGGK	10	Unmodified	_TLFKIDKGGK_					0	0	0			REV__ENST00000485323.2_1_6:11738840-11768613:-|nuORF	REV__ENST00000485323.2_1_6:11738840-11768613:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.830322265625	2	553.832049	1105.64954	1.2868	0.00071265	-4.1883	-0.0023196	-2.9016	-0.001607	553.8295040340431	102.46	0.73058	102.5	102.18	102.91	0.043198					39	17	3	0	0	0	0.86718	1	11092	11092		27.882	4.8398	1	576050	+		58302	17902	38925	38941	66135	66135					0.10094577919812764
TLFKLPVNTT	10	Unmodified	_TLFKLPVNTT_					0	0	0			REV__MER57A-int_dup1703|chr19:23112751-23113886:+|1.179770426644866|0.266030358890427|2.15|63.0|76|2|anti-sense	REV__MER57A-int_dup1703|chr19:23112751-23113886:+|1.179770426644866|0.266030358890427|2.15|63.0|76|2|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3297119140625	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.86348	1	9854	9854		31.53	1.0262	1	18558000	+		58303	29657	38926	38942	66136	66136					0.08819158199935373
TLFLALIGG	9	Unmodified	_TLFLALIGG_					0	0	0		ENSG00000139329|ENST00000266718|LUM	ENSG00000139329|ENST00000266718|LUM	ENSG00000139329|ENST00000266718|LUM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.7761535644531	2	452.778754	903.542954	-1.4187	-0.00064234	-3.9635	-0.0017946	-5.3822	-0.0024369	452.7768489243776	45.517	1.7048	45.988	44.712	46.417	0.47139					54	41	2	0	0	0	0.76996	1	4229	4229		33.516	1.5607	1	608490			58304	4363	38927	38943	66137	66137					0.08732447425290957
TLFYGAALY	9	Unmodified	_TLFYGAALY_					0	0	0		ENSG00000198104|ENST00000641644|OR2T6	ENSG00000198104|ENST00000641644|OR2T6	ENSG00000198104|ENST00000641644|OR2T6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.762939453125	2	509.765843	1017.51713	-0.4431	-0.00022588	-4.2777	-0.0021806	-4.7208	-0.0024065	509.7635757668311	49.02	0.96839	49.02	48.705	49.674	0.00016785					42	21	3	0	0	0	0.67235	1	4104	4104		42.474	0.078325	1	450640			58305	8239	38928	38944	66138	66138					0.009075531829921601
TLGARVTR	8	Unmodified	_TLGARVTR_					0	0	0		ENSG00000183273|ENST00000327554|CCDC60	ENSG00000183273|ENST00000327554|CCDC60	ENSG00000183273|ENST00000327554|CCDC60	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2653503417969	2	437.266876	872.519199	0.72217	0.00031578	-3.1375	-0.0013719	-2.4154	-0.0010562	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.8621	1	737	737		26.693	4.733	1	944940			58306	7515	38929	38945	66139	66139					0.07784026711476599
TLGCNKSC	8	Unmodified	_TLGCNKSC_					0	0	0		ENSG00000124116|ENST00000243938|WFDC3	ENSG00000124116|ENST00000243938|WFDC3	ENSG00000124116|ENST00000243938|WFDC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1833190917969	2	413.183306	824.352059	2.5483	0.0010529	-4.3207	-0.0017852	-1.7724	-0.00073233	413.181828123707	101.42	1.3935	101.74	101.44	102.84	0.3251					104	36	4	0	0	0	0.87479	1	12360	12360		30.504	8.8013	1	7436900			58307	3305	38930	38946	66140	66140					-0.06714325219957118
TLGFIVGNISL	11	Unmodified	_TLGFIVGNISL_					0	0	0			REV__ENST00000534785.1_1_11:65061654-65063444:+|nuORF	REV__ENST00000534785.1_1_11:65061654-65063444:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3298950195312	2	567.331882	1132.64921	-1.3957	-0.00079181	-1.9666	-0.0011157	-3.3623	-0.0019075	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.68532	1	9035	9035		33.922	0	1	5956400	+		58308	16202	38931	38947	66141	66141					0.0881915819995811
TLGGPESFFDK	11	Unmodified	_TLGGPESFFDK_					0	0	0		nc|ENSG00000117543|Q9H2P9-4|DPH5	nc|ENSG00000117543|Q9H2P9-4|DPH5	nc|ENSG00000117543|Q9H2P9-4|DPH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.2899169921875	2	599.292953	1196.57135	-0.48379	-0.00028993	2.2845	0.0013691	1.8007	0.0010791	599.2952879309073	54.018	0.34547	54.013	53.85	54.195	-0.0053673					18	9	3	0	0	0	0.60058	1	4751	4751		44.377	1.5129	1	78319			58309	14863	38932	38948	66142	66142					-0.019068994560939245
TLGGPESFFDK	11	Unmodified	_TLGGPESFFDK_					0	0	0		nc|ENSG00000117543|Q9H2P9-4|DPH5	nc|ENSG00000117543|Q9H2P9-4|DPH5	nc|ENSG00000117543|Q9H2P9-4|DPH5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	599.292953	1196.57135	-1.407	-0.0008432	4.4495	0.0026665	3.0425	0.0018233	599.2966756281425	54.003	0.4234	54.026	53.818	54.241	0.022537	0.027273	0.0015285	NaN	44.377	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97780			58310	14863	38932	38948							-0.019068994560939245
TLGGQERKI	9	Unmodified	_TLGGQERKI_					0	0	0		ENST00000297540.4_1_5:125961755-125961854:+|nuORF	ENST00000297540.4_1_5:125961755-125961854:+|nuORF	ENST00000297540.4_1_5:125961755-125961854:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.28997802734375	2	501.290548	1000.56654	-1.5697	-0.00078686	1.3648	0.00068414	-0.20492	-0.00010273	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.68711	1	8898	8898		41.427	3.6151	1	9242300			58311	9761	38933	38949	66143	66143					0.06628261191792717
TLGISRAR	8	Unmodified	_TLGISRAR_					0	0	0		ENST00000513761.5_1_4:170541930-170542083:+|nuORF	ENST00000513761.5_1_4:170541930-170542083:+|nuORF	ENST00000513761.5_1_4:170541930-170542083:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2568359375	2	437.266876	872.519199	-1.6149	-0.00070614	-2.138	-0.00093487	-3.7529	-0.001641	437.26557625669943	30.299	0.38041	30.363	30.246	30.626	0.063122					24	19	2	0	0	0	0.4196	1	1323	1323		16.473	13.063	1	30517			58312	13061	38934	38950	66144	66144					0.0778402671146523
TLGITIKH	8	Unmodified	_TLGITIKH_					0	0	0		MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|30|3|anti-sense	MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|30|3|anti-sense	MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|30|3|anti-sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7879638671875	2	441.774003	881.533452	0.18693	8.258E-05	-1.5548	-0.00068689	-1.3679	-0.00060431	441.77337276916376	39.144	0.18189	39.233	39.111	39.292	0.088375					7	4	2	0	0	0	0.4196	1	2374	2374		12.959	4.1369	1	130210			58313	14721	38935	38951	66145	66145					0.08794679139759864
TLGITIKH	8	Unmodified	_TLGITIKH_					0	0	0		MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|30|3|anti-sense	MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|30|3|anti-sense	MSTA_dup17445|chr17:18660095-18660492:+|1.0398810930632785|0.2644812332018714|1.98|63.0|30|3|anti-sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7871398925781	2	441.774003	881.533452	-1.3312	-0.0005881	1.3052	0.00057662	-0.026	-1.1486E-05	441.775126356604	40.879	0.17752	41.469	41.347	41.525	0.59024					8	4	3	0	0	0	0.4196	1	3554	3554		40.573	0	1	1197600			58314	14721	38935	38951	66146	66146					0.08794679139759864
TLGLTVAPP	9	Unmodified	_TLGLTVAPP_					0	0	0			REV__ENST00000536017.1_1_11:64053906-64055433:+|nuORF	REV__ENST00000536017.1_1_11:64053906-64055433:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801818847656	2	434.760561	867.506569	0.14409	6.2645E-05	0.68778	0.00029902	0.83187	0.00036166	434.76049440806395	36.939	0.53678	36.95	36.748	37.285	0.011173					15	11	2	0	0	0	0.20789	1	2412	2412		31.955	8.9124	1	41953	+		58315	21911	38936	38952	66147	66147					0.06751570528570028
TLGPVPEI	8	Unmodified	_TLGPVPEI_					0	0	0		ENST00000472982.5_1_1:43637061-43637789:-|nuORF;ENSG00000117395|ENST00000236051|EBNA1BP2	ENST00000472982.5_1_1:43637061-43637789:-|nuORF	ENST00000472982.5_1_1:43637061-43637789:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2380065917969	2	413.239461	824.46437	-1.5467	-0.00063915	0.5911	0.00024426	-0.95558	-0.00039489	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.85277	1	7127	7127		25.45	0	1	1341700			58316	2973	38937	38953	66148	66148					0.04511595120197853
TLGRYYPVLAL	11	Unmodified	_TLGRYYPVLAL_					0	0	0			REV__nc|ENSG00000158113|Q8N309-2|LRRC43	REV__nc|ENSG00000158113|Q8N309-2|LRRC43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3688354492188	2	633.366256	1264.71796	1.4714	0.00093196	3.0805	0.0019511	4.5519	0.002883	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.67762	2	10001	10001;10180		29.17	0.84144	1	11430000	+		58317	20588	38938	38954	66149;66150	66149					0.09618822499669477
TLGRYYPVLAL	11	Unmodified	_TLGRYYPVLAL_					0	0	0			REV__nc|ENSG00000158113|Q8N309-2|LRRC43	REV__nc|ENSG00000158113|Q8N309-2|LRRC43	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3684692382812	2	633.366256	1264.71796	1.5977	0.0010119	2.9361	0.0018596	4.5338	0.0028716	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.69071	1	11704	11704		30.318	5.7985	1	10012000	+		58318	20588	38938	38954	66151	66151					0.09618822499669477
TLGSGFIL	8	Unmodified	_TLGSGFIL_					0	0	0		ENSG00000279486|ENST00000641258|OR2AG1;ENSG00000188124|ENST00000641124|OR2AG2	ENSG00000279486|ENST00000641258|OR2AG1	ENSG00000279486|ENST00000641258|OR2AG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2322692871094	2	404.234179	806.453805	-0.18723	-7.5686E-05	-2.7376	-0.0011067	-2.9249	-0.0011823	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.86791	1	8454	8454		28.254	0	1	4185000			58319	7906	38939	38955	66152	66152					0.04283612465758324
TLGTDDMH	8	Oxidation (M)	_TLGTDDM(Oxidation (M))H_		TLGTDDM(1)H		TLGTDDM(42)H	0	0	1			REV__chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	REV__chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.1886901855469	2	453.1871	904.359646	0.77992	0.00035345	0.41585	0.00018846	1.1958	0.00054191	453.1871622996966	25.372	0.60456	25.335	25.074	25.678	-0.037178					29	17	2	0	0	0	0.91005	1	1017	1017		42.474	14.22	1	55922	+		58320	15683	38940	38956	66153	66153		223			-0.09635894418670432
TLGTDDMH	8	Oxidation (M)	_TLGTDDM(Oxidation (M))H_					0	0	1			REV__chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	REV__chr19:17648983-17649509|53|19.53|0.09|7.82|-|ENST00000550896|UNC13A,UNC13A	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	453.1871	904.359646	0.57279	0.00025958	0.90333	0.00040938	1.4761	0.00066896	453.1872522299249	25.076	0.53498	25.127	24.858	25.393	0.050451	-0.10394	0.00028304	NaN	42.474	30	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31521	+		58321	15683	38940	38956				223			-0.09635894418670432
TLGVPEGAA	9	Unmodified	_TLGVPEGAA_					0	0	0		ENST00000426836.5_1_20:35401877-35402075:-|nuORF	ENST00000426836.5_1_20:35401877-35402075:-|nuORF	ENST00000426836.5_1_20:35401877-35402075:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	407.720703125	2	407.718893	813.423233	2.6827	0.0010938	1.362	0.00055532	4.0447	0.0016491	407.7196256873708	102.15	0.80925	102.41	102.07	102.88	0.26322					65	19	4	0	0	0	0.58151	1	12374	12374		47.916	5.4411	1	5496600			58322	11564	38941	38957	66154	66154					0.009058340807200693
TLGVSLPI	8	Unmodified	_TLGVSLPI_					0	0	0		ENSG00000104218|ENST00000678616|CSPP1;nc|ENSG00000104218|Q1MSJ5|CSPP1	ENSG00000104218|ENST00000678616|CSPP1	ENSG00000104218|ENST00000678616|CSPP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.2479248046875	2	400.249829	798.485105	0.55585	0.00022248	-2.9993	-0.0012005	-2.4435	-0.00097801	400.2484529763441	24.6	0.84744	24.655	24.318	25.165	0.055025					44	24	3	0	0	0	0.81548	1	949	949		20.482	0	1	85580			58323	2119	38942	38958	66155	66155					0.07780185499859726
TLGVTYLDENV	11	Unmodified	_TLGVTYLDENV_					0	0	0		nc|ENSG00000101187|Q96BD0-3|SLCO4A1;nc|ENSG00000101187|Q96BD0-4|SLCO4A1;ENSG00000101187|ENST00000217159|SLCO4A1	nc|ENSG00000101187|Q96BD0-3|SLCO4A1	nc|ENSG00000101187|Q96BD0-3|SLCO4A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.54278564453125	3	408.543321	1222.60813	0.40091	0.00016379	-0.5774	-0.00023589	-0.17649	-7.2104E-05	408.54300111388704	56.588	0.95171	57.148	56.572	57.523	0.55954					47	21	3	0	0	0	0.60888	1	5868	5868		43.419	2.3385	1	1238500			58324	1905	38943	38959	66156	66156					0.005733523697927012
TLGVTYLDENV	11	Unmodified	_TLGVTYLDENV_					0	0	0		nc|ENSG00000101187|Q96BD0-3|SLCO4A1;nc|ENSG00000101187|Q96BD0-4|SLCO4A1;ENSG00000101187|ENST00000217159|SLCO4A1	nc|ENSG00000101187|Q96BD0-3|SLCO4A1	nc|ENSG00000101187|Q96BD0-3|SLCO4A1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	408.543321	1222.60813	0.41036	0.00016765	-0.52685	-0.00021524	-0.11649	-4.7591E-05	408.5429648680176	56.727	0.9853	57.124	56.632	57.617	0.39672	-0.011969	2.7829E-05	NaN	43.419	50	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	923840			58325	1905	38943	38959							0.005733523697927012
TLHGTARGK	9	Unmodified	_TLHGTARGK_					0	0	0		ENSG00000182040|ENST00000614341|USH1G	ENSG00000182040|ENST00000614341|USH1G	ENSG00000182040|ENST00000614341|USH1G	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7693176269531	2	470.769783	939.525013	-0.039118	-1.8416E-05	-1.6086	-0.0007573	-1.6478	-0.00077572	470.76888428229023	53.107	1.8265	53.104	52.614	54.44	-0.0033035					119	53	3	0	0	0	0.78983	1	4690	4690		27.882	1.0861	1	1606400			58326	7419	38944	38960	66157	66157					0.052831252231385406
TLHHAPAP	8	Unmodified	_TLHHAPAP_					0	0	0		ENST00000431558.1_1_3:9989091-9989208:+|nuORF	ENST00000431558.1_1_3:9989091-9989208:+|nuORF	ENST00000431558.1_1_3:9989091-9989208:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.2279357910156	2	422.22722	842.439886	-1.8003	-0.00076015	3.6324	0.0015337	1.8321	0.00077356	422.2286994830419	63.649	0.63203	63.769	63.398	64.03	0.12004					57	31	2	0	0	0	0.82464	1	5569	5569		21.702	0.7554	1	224330			58327	11650	38945	38961	66158	66158					0.012363797573129887
TLHSSTNFA	9	Unmodified	_TLHSSTNFA_					0	0	0			REV__ENSG00000196081|ENST00000418100|ZNF724	REV__ENSG00000196081|ENST00000418100|ZNF724	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	489.2353515625	2	489.237981	976.461409	-1.3472	-0.00065908	-1.2202	-0.00059695	-2.5673	-0.001256	489.23722869031667	63.74	1.1993	63.74	63.341	64.54	0					123	57	3	0	0	0	0.71772	1	5626	5626		39.253	0	1	324370	+		58328	23086	38946	38962	66159	66159					-0.02776280004616183
TLHSSTNFA	9	Unmodified	_TLHSSTNFA_					0	0	0			REV__ENSG00000196081|ENST00000418100|ZNF724	REV__ENSG00000196081|ENST00000418100|ZNF724	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.23614501953125	2	489.237981	976.461409	-2.6543	-0.0012986	-0.42131	-0.00020612	-3.0756	-0.0015047	489.2378098143177	63.789	1.3068	63.816	63.573	64.88	0.027142					83	36	4	0	0	0	0.6204	1	6010	6010		45.972	0	1	723550	+		58329	23086	38946	38962	66160	66160					-0.02776280004616183
TLICLSGVVL	10	Unmodified	_TLICLSGVVL_					0	0	0			REV__ENST00000557163.1_1_14:61746812-61748042:-|nuORF	REV__ENST00000557163.1_1_14:61746812-61748042:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.2809143066406	2	509.304278	1016.594	-0.47685	-0.00024286	2.8286	0.0014406	2.3518	0.0011978	509.30681748441117	36.987	0.50604	37.01	36.729	37.235	0.023624					14	12	2	0	0	0	0.37624	1	2092	2092		14.137	0	1	32525	+		58330	22501	38947	38963	66161	66161					0.08637028407838443
TLIDRSRL	8	Unmodified	_TLIDRSRL_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.291748046875	2	487.293091	972.571629	-0.70314	-0.00034264	0.88419	0.00043086	0.18105	8.8225E-05	487.29338906256316	90.865	2.6767	91.083	90.551	93.228	0.21736					133	64	3	0	0	0	0.82658	1	9182	9182		21.96	0	1	1731200	+		58331	18022	38948	38964	66162	66162					0.08424565054417599
TLIDVLLIG	9	Unmodified	_TLIDVLLIG_					0	0	0		nc|ENSG00000184277|Q9BRN9-2|TM2D3;ENSG00000184277|ENST00000333202|TM2D3	nc|ENSG00000184277|Q9BRN9-2|TM2D3	nc|ENSG00000184277|Q9BRN9-2|TM2D3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8066711425781	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.7932	1	2453	2453		24.203	0	1	336090			58332	7597	38949	38965	66163	66163					0.11580985768250684
TLIDVLLIG	9	Unmodified	_TLIDVLLIG_					0	0	0		nc|ENSG00000184277|Q9BRN9-2|TM2D3;ENSG00000184277|ENST00000333202|TM2D3	nc|ENSG00000184277|Q9BRN9-2|TM2D3	nc|ENSG00000184277|Q9BRN9-2|TM2D3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8056945800781	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.7932	2	2757	2757;2767		24.203	0	1	371600			58333	7597	38949	38965	66164;66165	66164					0.11580985768250684
TLIDVLLIG	9	Unmodified	_TLIDVLLIG_					0	0	0		nc|ENSG00000184277|Q9BRN9-2|TM2D3;ENSG00000184277|ENST00000333202|TM2D3	nc|ENSG00000184277|Q9BRN9-2|TM2D3	nc|ENSG00000184277|Q9BRN9-2|TM2D3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8040466308594	2	478.804968	955.595384	-2.2898	-0.0010963	3.6554	0.0017502	1.3657	0.00065389	478.80658371263473	41.743	1.2165	41.746	40.986	42.202	0.0034142					57	30	2	0	0	0	0.7932	1	3026	3026		23.042	0	1	281640			58334	7597	38949	38965	66166	66166					0.11580985768250684
TLIDVLLIG	9	Unmodified	_TLIDVLLIG_					0	0	0		nc|ENSG00000184277|Q9BRN9-2|TM2D3;ENSG00000184277|ENST00000333202|TM2D3	nc|ENSG00000184277|Q9BRN9-2|TM2D3	nc|ENSG00000184277|Q9BRN9-2|TM2D3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8038330078125	2	478.804968	955.595384	-2.1118	-0.0010111	4.0445	0.0019365	1.9327	0.00092538	478.8067215450766	42.623	1.2578	42.623	42.157	43.414	0.00016785					54	29	3	0	0	0	0.7932	1	3189	3189		24.203	1.1603	1	179530			58335	7597	38949	38965	66167	66167					0.11580985768250684
TLIEHAHTKPL	11	Unmodified	_TLIEHAHTKPL_					0	0	0		ENSG00000119912|ENST00000265986|IDE;nc|ENSG00000119912|P14735-2|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF	ENSG00000119912|ENST00000265986|IDE	ENSG00000119912|ENST00000265986|IDE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.3589477539062	2	630.358962	1258.70337	1.3322	0.00083973	-1.4046	-0.00088538	-0.072421	-4.5651E-05	630.3578781034934	46.804	0.71899	46.823	46.565	47.284	0.018967					42	19	3	0	0	0	0.53461	2	3468	3468;3489		47.96	22.834	1	498040			58336	3102	38950	38966	66168;66169	66168					0.08436750351506817
TLIEHAHTKPL	11	Unmodified	_TLIEHAHTKPL_					0	0	0		ENSG00000119912|ENST00000265986|IDE;nc|ENSG00000119912|P14735-2|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF	ENSG00000119912|ENST00000265986|IDE	ENSG00000119912|ENST00000265986|IDE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	630.3593139648438	2	630.358962	1258.70337	0.44406	0.00027991	-0.57415	-0.00036192	-0.1301	-8.2007E-05	630.358458889314	46.888	0.6969	46.926	46.618	47.315	0.038185					40	18	3	0	0	0	0.61907	1	3491	3491		40.058	10.888	1	490600			58337	3102	38950	38966	66170	66170					0.08436750351506817
TLIEKREKHSL	11	Unmodified	_TLIEKREKHSL_					0	0	0			REV__ENSG00000196169|ENST00000389916|KIF19	REV__ENSG00000196169|ENST00000389916|KIF19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9326477050781	3	451.933143	1352.7776	2.5866	0.001169	-3.6315	-0.0016412	-1.0449	-0.00047222	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.73647	1	10973	10973		25.068	2.5062	1	1152500	+		58338	23097	38951	38967	66171	66171					0.11532093443042868
TLIGINFGLL	10	Unmodified	_TLIGINFGLL_					0	0	0		ENSG00000231738|ENST00000532498|TSPAN19	ENSG00000231738|ENST00000532498|TSPAN19	ENSG00000231738|ENST00000532498|TSPAN19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8209838867188	2	530.823692	1059.63283	-0.85098	-0.00045172	-4.1464	-0.002201	-4.9974	-0.0026527	530.8213432265311	82.745	2.1308	82.745	82.264	84.395	0					134	52	5	0	0	0	0.57924	1	7799	7799		51.193	11.94	1	4119600			58339	8735	38952	38968	66172	66172					0.10540077033874695
TLIGNLLIV	9	Unmodified	_TLIGNLLIV_					0	0	0		ENSG00000172146|ENST00000641732|OR1A1	ENSG00000172146|ENST00000641732|OR1A1	ENSG00000172146|ENST00000641732|OR1A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.31390380859375	2	478.312961	954.611368	-1.7913	-0.00085682	4.48	0.0021429	2.6887	0.001286	478.3149127004832	37.231	1.0176	37.231	36.822	37.84	0					42	23	2	0	0	0	0.7932	1	2190	2190		21.96	0	1	99124			58340	6746	38953	38969	66173	66173					0.13224692005144334
TLIHHNEAVL	10	Unmodified	_TLIHHNEAVL_					0	0	0		nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11;ENSG00000072803|ENST00000517395|FBXW11	nc|ENSG00000072803|Q9UKB1-2|FBXW11	nc|ENSG00000072803|Q9UKB1-2|FBXW11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8165283203125	2	573.81693	1145.61931	-0.77927	-0.00044716	0.57434	0.00032957	-0.20493	-0.00011759	573.8171128348157	36.202	1.1773	36.211	35.659	36.837	0.0092773					66	25	4	0	0	0	0.4892	1	2348	2348		56.721	9.0637	1	690830			58341	1282	38954	38970	66174	66174					0.052322192545943835
TLIHHNEAVL	10	Unmodified	_TLIHHNEAVL_					0	0	0		nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11;ENSG00000072803|ENST00000517395|FBXW11	nc|ENSG00000072803|Q9UKB1-2|FBXW11	nc|ENSG00000072803|Q9UKB1-2|FBXW11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	573.8167114257812	2	573.81693	1145.61931	0.2907	0.00016681	-0.11062	-6.3478E-05	0.18007	0.00010333	573.816753391891	35.956	1.0187	36.059	35.47	36.489	0.10306					84	33	4	0	0	0	0.80179	1	1967	1967		39.253	2.8061	1	933610			58342	1282	38954	38970	66175	66175					0.052322192545943835
TLIICHGLA	9	Unmodified	_TLIICHGLA_					0	0	0		nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6;nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-5|MARCHF6	nc|ENSG00000145495|O60337-5|MARCHF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7690124511719	2	470.767863	939.521173	0.3438	0.00016185	1.592	0.00074944	1.9357	0.00091129	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.67235	1	4389	4389		42.474	4.6629	1	1863100			58343	4773	38955	38971	66176	66176					0.048993194050581224
TLIIDDPS	8	Unmodified	_TLIIDDPS_					0	0	0		ENSG00000109917|ENST00000227322|ZPR1	ENSG00000109917|ENST00000227322|ZPR1	ENSG00000109917|ENST00000227322|ZPR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.5871276855469	2	437.231833	872.449113	0.091741	4.0112E-05	2.0061	0.00087714	2.0979	0.00091725	437.23276309251366	50.158	0.74123	50.606	50.307	51.049	0.44761					23	17	2	0	0	0	0.4196	1	4969	4969		18.324	0	1	127120			58344	2491	38956	38972	66177	66177					0.007786835323372543
TLIIILPVLT	10	Unmodified	_TLIIILPVLT_					0	0	0			REV__nc|ENSG00000132932|Q9NTI2-3|ATP8A2	REV__nc|ENSG00000132932|Q9NTI2-3|ATP8A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3741455078125	2	548.373018	1094.73148	-0.014191	-7.7821E-06	2.2319	0.0012239	2.2178	0.0012162	548.374000997207	35.509	1.288	35.453	35.002	36.29	-0.055901					73	28	3	0	0	0	0.88945	1	2281	2281		10.866	4.13	1	330260	+		58345	19044	38957	38973	66178	66178					0.18790680278880245
TLIIILPVLT	10	Unmodified	_TLIIILPVLT_					0	0	0			REV__nc|ENSG00000132932|Q9NTI2-3|ATP8A2	REV__nc|ENSG00000132932|Q9NTI2-3|ATP8A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.3739624023438	2	548.373018	1094.73148	0.10207	5.5971E-05	2.4087	0.0013209	2.5108	0.0013769	548.3742221063811	37.296	1.0877	37.32	36.95	38.037	0.023621					64	31	3	0	0	0	0.8932	1	2167	2167		10.265	0.5596	1	318790	+		58346	19044	38957	38973	66179	66179					0.18790680278880245
TLILLLPYHLN	11	Unmodified	_TLILLLPYHLN_					0	0	0			REV__ENSG00000143919|ENST00000378494|CAMKMT	REV__ENSG00000143919|ENST00000378494|CAMKMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2666931152344	3	437.267463	1308.78056	-0.34848	-0.00015238	1.1112	0.00048591	0.76277	0.00033353	437.26783788235974	49.466	1.602	49.926	49.459	51.061	0.45983					122	38	5	0	0	0	0.77205	1	4779	4779		17.167	0.63689	1	4698000	+		58347	19854	38958	38974	66180	66180					0.13851968567882977
TLILLLPYHLN	11	Unmodified	_TLILLLPYHLN_					0	0	0			REV__ENSG00000143919|ENST00000378494|CAMKMT	REV__ENSG00000143919|ENST00000378494|CAMKMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2677917480469	3	437.267463	1308.78056	0.78044	0.00034126	-0.10112	-4.4216E-05	0.67932	0.00029704	437.26733211231357	49.246	1.5472	50.15	49.725	51.272	0.90424					125	37	5	0	0	0	0.75121	1	4774	4774		21.78	3.2494	1	5667400	+		58348	19854	38958	38974	66181	66181					0.13851968567882977
TLILPPAS	8	Unmodified	_TLILPPAS_					0	0	0			REV__ENSG00000171843|ENST00000380338|MLLT3	REV__ENSG00000171843|ENST00000380338|MLLT3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2486267089844	2	406.249829	810.485105	-1.171	-0.0004757	-1.7314	-0.00070337	-2.9023	-0.0011791	406.249074559582	88.655	2.9231	88.655	87.726	90.649	0					243	67	6	0	0	0	0.86288	6	8544	8544;8556;8568;8592;8604;8616		26.796	5.0938	1	30016000	+		58349	21776	38959	38975	66182;66183;66184;66185;66186;66187	66182					0.07228185499843676
TLILPPAS	8	Unmodified	_TLILPPAS_					0	0	0			REV__ENSG00000171843|ENST00000380338|MLLT3	REV__ENSG00000171843|ENST00000380338|MLLT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2484436035156	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.86288	6	8973	8973;8985;8997;9009;9033;9045		31.955	10.253	1	50007000	+		58350	21776	38959	38975	66188;66189;66190;66191;66192;66193	66188					0.07228185499843676
TLILPPAS	8	Unmodified	_TLILPPAS_					0	0	0			REV__ENSG00000171843|ENST00000380338|MLLT3	REV__ENSG00000171843|ENST00000380338|MLLT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2485656738281	2	406.249829	810.485105	1.1516	0.00046786	-4.2235	-0.0017158	-3.0718	-0.0012479	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.86288	4	9190	9190;9226;9238;9286		26.796	5.0938	1	58759000	+		58351	21776	38959	38975	66194;66195;66196;66197	66194					0.07228185499843676
TLILPPAS	8	Unmodified	_TLILPPAS_					0	0	0			REV__ENSG00000171843|ENST00000380338|MLLT3	REV__ENSG00000171843|ENST00000380338|MLLT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2485656738281	2	406.249829	810.485105	-1.8141	-0.00073698	-1.2967	-0.0005268	-3.1108	-0.0012638	406.2492804475132	88.246	3.7661	88.447	86.686	90.452	0.20119					309	88	5	0	0	0	0.86288	5	8740	8716;8740;8764;8801;8825		31.955	11.473	1	42617000	+		58352	21776	38959	38975	66198;66199;66200;66201;66202	66199					0.07228185499843676
TLILPPAS	8	Unmodified	_TLILPPAS_					0	0	0			REV__ENSG00000171843|ENST00000380338|MLLT3	REV__ENSG00000171843|ENST00000380338|MLLT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2484436035156	2	406.249829	810.485105	0.62319	0.00025317	-3.6411	-0.0014792	-3.0179	-0.001226	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.85277	4	8834	8761;8773;8797;8834		35.201	5.3592	1	38001000	+		58353	21776	38959	38975	66203;66204;66205;66206	66206					0.07228185499843676
TLILPPAS	8	Unmodified	_TLILPPAS_					0	0	0			REV__ENSG00000171843|ENST00000380338|MLLT3	REV__ENSG00000171843|ENST00000380338|MLLT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.24847412109375	2	406.249829	810.485105	-1.9277	-0.00078311	-1.0996	-0.00044672	-3.0273	-0.0012298	406.24932552796776	88.262	2.6386	88.431	87.824	90.463	0.16922					237	61	5	0	0	0	0.85277	7	8781	8673;8685;8697;8709;8733;8745;8781		26.796	5.0938	1	31099000	+		58354	21776	38959	38975	66207;66208;66209;66210;66211;66212;66213	66213					0.07228185499843676
TLILPPAS	8	Unmodified	_TLILPPAS_					0	0	0			REV__ENSG00000171843|ENST00000380338|MLLT3	REV__ENSG00000171843|ENST00000380338|MLLT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2486877441406	2	406.249829	810.485105	-1.9275	-0.00078306	-0.64729	-0.00026296	-2.5748	-0.001046	406.2494715444893	90.638	1.8224	90.818	90.389	92.211	0.18029					100	43	3	0	0	0	0.8347	1	9085	9085		23.042	1.3402	1	761320	+		58355	21776	38959	38975	66214	66214					0.07228185499843676
TLILPPAS	8	Unmodified	_TLILPPAS_					0	0	0			REV__ENSG00000171843|ENST00000380338|MLLT3	REV__ENSG00000171843|ENST00000380338|MLLT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.24859619140625	2	406.249829	810.485105	-1.235	-0.0005017	-1.7781	-0.00072233	-3.013	-0.001224	406.249039841858	88.183	2.3364	88.646	88.102	90.438	0.46312					198	58	5	0	0	0	0.85277	3	10396	10396;10408;10468		33.516	11.813	1	38125000	+		58356	21776	38959	38975	66215;66216;66217	66215					0.07228185499843676
TLILRQNHLAS	11	Unmodified	_TLILRQNHLAS_					0	0	0		ENSG00000137462|ENST00000642700|TLR2	ENSG00000137462|ENST00000642700|TLR2	ENSG00000137462|ENST00000642700|TLR2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.368896484375	2	633.369861	1264.72517	-0.087569	-5.5464E-05	-0.98413	-0.00062332	-1.0717	-0.00067878	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.66929	1	9814	9814		36.447	4.8125	1	7059800			58357	4201	38960	38976	66218	66218					0.10339555100085818
TLILRQNHLAS	11	Unmodified	_TLILRQNHLAS_					0	0	0		ENSG00000137462|ENST00000642700|TLR2	ENSG00000137462|ENST00000642700|TLR2	ENSG00000137462|ENST00000642700|TLR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.58203125	3	422.582333	1264.72517	2.2204	0.0009383	-3.0442	-0.0012864	-0.82378	-0.00034811	422.58094622121547	97.769	3.2395	97.714	96.802	100.04	-0.055542					208	75	4	0	0	0	0.72374	1	10615	10615		27.644	4.266	1	525770			58358	4201	38960	38976	66219	66219					0.10339555100085818
TLINLAQQ	8	Unmodified	_TLINLAQQ_					0	0	0			REV__nc|ENSG00000005189|Q96IC2-2|REXO5	REV__nc|ENSG00000005189|Q96IC2-2|REXO5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.76177978515625	2	450.761092	899.507631	-1.3458	-0.00060662	1.4037	0.00063273	0.057932	2.6114E-05	450.7615375119777	37.215	0.57115	37.238	36.911	37.482	0.023621					27	13	3	0	0	0	0.66521	1	2115	2115		68.787	2.3575	1	186820	+		58359	16079	38961	38977	66220	66220					0.05385784897475787
TLINLAQQ	8	Unmodified	_TLINLAQQ_					0	0	0			REV__nc|ENSG00000005189|Q96IC2-2|REXO5	REV__nc|ENSG00000005189|Q96IC2-2|REXO5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.76116943359375	2	450.761092	899.507631	0.17915	8.0753E-05	0.38334	0.0001728	0.56249	0.00025355	450.7608722392462	36.967	0.54016	37.066	36.773	37.313	0.099277					27	13	3	0	0	0	0.90523	1	2098	2098		40.778	1.5253	1	190000	+		58360	16079	38961	38977	66221	66221					0.05385784897475787
TLINLAQQ	8	Unmodified	_TLINLAQQ_					0	0	0			REV__nc|ENSG00000005189|Q96IC2-2|REXO5	REV__nc|ENSG00000005189|Q96IC2-2|REXO5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.7611389160156	2	450.761092	899.507631	-0.27582	-0.00012433	0.16068	7.243E-05	-0.11514	-5.19E-05	450.7610342456716	36.806	1.1162	37.088	36.638	37.755	0.28173					48	26	3	0	0	0	0.42407	2	2920	2897;2920		79.451	8.1553	1	572770	+		58361	16079	38961	38977	66222;66223	66223					0.05385784897475787
TLINLAQQ	8	Unmodified	_TLINLAQQ_					0	0	0			REV__nc|ENSG00000005189|Q96IC2-2|REXO5	REV__nc|ENSG00000005189|Q96IC2-2|REXO5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.76080322265625	2	450.761092	899.507631	1.2323	0.00055546	-1.3685	-0.00061685	-0.13621	-6.1398E-05	450.76030899885507	36.683	1.0386	37.156	36.819	37.858	0.47306					58	24	3	0	0	0	0.20947	2	2919	2919;2931		108.09	8.7125	1	680950	+		58362	16079	38961	38977	66224;66225	66224					0.05385784897475787
TLINLAQQ	8	Unmodified	_TLINLAQQ_					0	0	0			REV__nc|ENSG00000005189|Q96IC2-2|REXO5	REV__nc|ENSG00000005189|Q96IC2-2|REXO5	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	450.761092	899.507631	-1.9237	-0.00086714	2.0028	0.0009028	0.079124	3.5666E-05	450.7619115466545	37.114	0.61713	37.114	36.778	37.395	0	-0.0064779	0.0015408	NaN	108.09	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105180	+		58363	16079	38961	38977							0.05385784897475787
TLINLAQQ	8	Unmodified	_TLINLAQQ_					0	0	0			REV__nc|ENSG00000005189|Q96IC2-2|REXO5	REV__nc|ENSG00000005189|Q96IC2-2|REXO5	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	450.761092	899.507631	0.17915	8.0753E-05	0.38334	0.0001728	0.56249	0.00025355	450.7608722392462	36.967	0.54016	37.066	36.773	37.313	0.099277	-0.054347	8.0732E-05	NaN	108.09	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	190000	+		58364	16079	38961	38977							0.05385784897475787
TLINLAQQ	8	Unmodified	_TLINLAQQ_					0	0	0			REV__nc|ENSG00000005189|Q96IC2-2|REXO5	REV__nc|ENSG00000005189|Q96IC2-2|REXO5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	450.761092	899.507631	0.036456	1.6433E-05	-0.079899	-3.6016E-05	-0.043443	-1.9583E-05	450.761099405405	37.09	0.56906	37.03	36.703	37.272	-0.060337	-0.091055	-0.00033689	NaN	108.09	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165750	+		58365	16079	38961	38977							0.05385784897475787
TLINLAQQ	8	Unmodified	_TLINLAQQ_					0	0	0			REV__nc|ENSG00000005189|Q96IC2-2|REXO5	REV__nc|ENSG00000005189|Q96IC2-2|REXO5	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	450.761092	899.507631	-0.27582	-0.00012433	0.16068	7.243E-05	-0.11514	-5.19E-05	450.7610342456716	36.806	1.1162	37.088	36.638	37.755	0.28173	-0.032411	-0.00012	NaN	108.09	48	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	572770	+		58366	16079	38961	38977							0.05385784897475787
TLINPMEVL	9	Oxidation (M)	_TLINPM(Oxidation (M))EVL_		TLINPM(1)EVL		TLINPM(130)EVL	0	0	1		ENSG00000181240|ENST00000321510|SLC25A41	ENSG00000181240|ENST00000321510|SLC25A41	ENSG00000181240|ENST00000321510|SLC25A41	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.2832641601562	2	523.283543	1044.55253	0.9826	0.00051418	-1.1069	-0.00057923	-0.12431	-6.5051E-05	523.2827649916386	54.437	1.1745	54.844	54.319	55.493	0.40663					66	27	4	0	0	0	0.01944	1	5520	5520		125.81	21.757	1	3636900			58367	7379	38962	38978	66226	66226		126			0.03203847648478586
TLIPTGTII	9	Unmodified	_TLIPTGTII_					0	0	0			REV__ENSG00000006659|ENST00000392052|LGALS14	REV__ENSG00000006659|ENST00000392052|LGALS14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7910461425781	2	464.789318	927.564084	0.090365	4.2E-05	2.7326	0.0012701	2.823	0.0013121	464.7905453409174	36.857	1.3586	36.797	35.976	37.335	-0.060333					62	38	2	0	0	0	0.77546	1	2080	2080		31.955	0	1	232790	+		58368	16109	38963	38979	66227	66227					0.09740412734163328
TLIRVPGIPG	10	Unmodified	_TLIRVPGIPG_					0	0	0		ENSG00000176928|ENST00000652361|GCNT4	ENSG00000176928|ENST00000652361|GCNT4	ENSG00000176928|ENST00000652361|GCNT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.82086181640625	2	511.821484	1021.62842	-0.24151	-0.00012361	-1.0812	-0.00055336	-1.3227	-0.00067697	511.82079892965015	83.817	1.239	84.252	83.581	84.82	0.43538					61	29	3	0	0	0	0.60985	1	9731	9731		49.536	8.7579	1	475770			58369	7105	38964	38980	66228	66228					0.11846612610963803
TLIRVPGIPG	10	Unmodified	_TLIRVPGIPG_					0	0	0		ENSG00000176928|ENST00000652361|GCNT4	ENSG00000176928|ENST00000652361|GCNT4	ENSG00000176928|ENST00000652361|GCNT4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	511.821484	1021.62842	0.47577	0.00024351	-1.7672	-0.00090447	-1.2914	-0.00066096	511.8204330523651	83.945	1.1122	84.4	83.767	84.879	0.45556	0.074089	-0.00034386	NaN	49.536	58	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	525850			58370	7105	38964	38980							0.11846612610963803
TLISILPLLL	10	Unmodified	_TLISILPLLL_					0	0	0		ENST00000304733.7_1_16:90072024-90072498:-|nuORF	ENST00000304733.7_1_16:90072024-90072498:-|nuORF	ENST00000304733.7_1_16:90072024-90072498:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3748779296875	2	548.373018	1094.73148	-0.26655	-0.00014617	2.6931	0.0014768	2.4265	0.0013306	548.374310727377	37.412	2.4822	37.359	36.203	38.685	-0.053558					161	55	4	0	0	0	0.86589	1	2618	2618		29.15	7.1897	1	654980			58371	9841	38965	38981	66229	66229					0.18790680278902983
TLISLFGG	8	Unmodified	_TLISLFGG_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.2326354980469	2	404.234179	806.453805	-0.18723	-7.5686E-05	-2.7376	-0.0011067	-2.9249	-0.0011823	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.92457	1	8490	8490		47.916	7.343	1	4185000	+		58372	19832	38966	38982	66230	66230					0.04283612465769693
TLISLFGG	8	Unmodified	_TLISLFGG_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.23272705078125	2	404.234179	806.453805	0.76489	0.0003092	-3.732	-0.0015086	-2.9671	-0.0011994	404.2325671203917	85.114	3.6255	85.042	83.452	87.078	-0.07196					165	83	2	0	0	0	0.89962	1	8694	8694		38.806	5.2906	1	4970800	+		58373	19832	38966	38982	66231	66231					0.04283612465769693
TLISLFGG	8	Unmodified	_TLISLFGG_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.2328796386719	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.85277	1	8288	8288		25.45	0	1	4227600	+		58374	19832	38966	38982	66232	66232					0.04283612465769693
TLISSGMLVF	10	Unmodified	_TLISSGMLVF_					0	0	0			REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	534.2932739257812	2	534.293911	1066.57327	0.70904	0.00037884	0.64007	0.00034199	1.3491	0.00072082	534.2942699947173	86.411	1.7794	86.56	85.987	87.767	0.14902					72	41	2	0	0	0	0.85934	1	8508	8508		35.618	1.4457	1	115330	+		58375	16466	38967	38983	66233	66233					0.042644380281672056
TLIVGYIFL	9	Unmodified	_TLIVGYIFL_					0	0	0			REV__ENST00000479979.1_1_1:167409855-167487702:-|nuORF	REV__ENST00000479979.1_1_1:167409855-167487702:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.818359375	2	519.815336	1037.61612	1.8559	0.00096475	3.6573	0.0019011	5.5132	0.0028659	519.8171404866895	95.918	1.5206	96.339	95.506	97.027	0.42051					101	36	3	0	0	0	0.67235	1	11490	11490		42.474	0	1	1896300	+		58376	23388	38968	38984	66234	66234					0.09881576147904525
TLIVVATLP	9	Unmodified	_TLIVVATLP_					0	0	0		ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8006896972656	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.7932	1	3413	3413		21.96	2.5999	1	279560			58377	8134	38969	38985	66235	66235					0.11905003113804469
TLIVVPTLT	9	Unmodified	_TLIVVPTLT_					0	0	0			REV__ENSG00000204296|ENST00000533191|TSBP1	REV__ENSG00000204296|ENST00000533191|TSBP1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8055114746094	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.41	1	42.371	41.871	42.871	-0.038223								0	0	0	0.28772	1	3257	3257		35.618	3.6634	1		+		58378	23478	38970	38986	66236	66236					0.11580985768239316
TLIYLVAGG	9	Unmodified	_TLIYLVAGG_					0	0	0			REV__ENSG00000008283|ENST00000360793|CYB561	REV__ENSG00000008283|ENST00000360793|CYB561	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.7656555175781	2	453.768386	905.522219	-1.8618	-0.00084484	-4.196	-0.001904	-6.0578	-0.0027489	453.76637939924865	41.209	0.88986	41.209	40.877	41.766	0					61	26	3	0	0	0	0.76996	1	2763	2763		33.516	1.5607	1	304750	+		58379	16132	38971	38987	66237	66237					0.06567857045627079
TLKADSIH	8	Unmodified	_TLKADSIH_					0	0	0			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.74493408203125	2	442.745442	883.476331	-0.84967	-0.00037619	-0.44682	-0.00019783	-1.2965	-0.00057401	442.74508565704974	91.361	1.8975	91.832	90.855	92.753	0.47068					98	45	4	0	0	0	0.92973	1	10906	10906		50.025	0	1	3563500	+		58380	20376	38972	38988	66238	66238					0.029932118633610116
TLKDRHPG	8	Unmodified	_TLKDRHPG_					0	0	0		ENSG00000137338|ENST00000682144|PGBD1	ENSG00000137338|ENST00000682144|PGBD1	ENSG00000137338|ENST00000682144|PGBD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.2555236816406	2	462.256508	922.498464	-0.14627	-6.7612E-05	-1.5619	-0.00072201	-1.7082	-0.00078963	462.25566302659877	50.35	1.4046	50.798	50.184	51.588	0.4476					68	33	3	0	0	0	0.90523	1	4940	4940		40.778	3.6191	1	1808400			58381	4192	38973	38989	66239	66239					0.03411436331805362
TLKGLRVHQ	9	Unmodified	_TLKGLRVHQ_					0	0	0		nc|ENSG00000148143|Q96JM2-3|ZNF462;ENSG00000148143|ENST00000277225|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	nc|ENSG00000148143|Q96JM2-3|ZNF462	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3247680664062	2	526.322183	1050.62981	0.45815	0.00024113	4.3609	0.0022953	4.8191	0.0025364	526.3243663512045	59.761	1.5451	59.877	59.01	60.555	0.1157					98	50	2	0	0	0	0.7932	1	5224	5224		26.693	0	1	175310			58382	4934	38974	38990	66240	66240					0.10652246699692114
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	518.81103515625	2	518.811116	1035.60768	-1.5537	-0.00080609	0.069631	3.6125E-05	-1.4841	-0.00076996	518.8109778713948	100.39	1.4071	100.56	99.928	101.34	0.172					74	32	4	0	0	0	0.51307	1	10405	10405		51.335	3.6781	1	1482900			58383	3665	38975	38991	66241	66241					0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8097534179688	2	518.811116	1035.60768	1.8422	0.00095573	-3.4755	-0.0018031	-1.6333	-0.00084739	518.8092565318011	96.29	1.53	96.695	95.729	97.259	0.40498					70	36	2	0	0	0	0.41566	1	11531	11531		56.721	1.9564	1	2487600			58384	3665	38975	38991	66242	66242					0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.81005859375	2	518.811116	1035.60768	1.9162	0.00099417	-3.4611	-0.0017957	-1.5449	-0.0008015	518.8092155721775	97.732	0.78409	98.117	97.598	98.382	0.38548					48	18	3	0	0	0	0.28163	2	11765	11753;11765		66.429	7.3311	1	3656200			58385	3665	38975	38991	66243;66244	66244					0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8106079101562	2	518.811116	1035.60768	1.9509	0.0010121	-3.6295	-0.001883	-1.6786	-0.0008709	518.8092395464859	98.349	1.5218	98.712	98.319	99.841	0.36308					101	37	4	0	0	0	0.48102	1	11810	11810		52.937	1.6012	1	12004000			58386	3665	38975	38991	66245	66245					0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8111572265625	2	518.811116	1035.60768	2.0333	0.0010549	-3.5591	-0.0018465	-1.5258	-0.00079161	518.8092333336378	100.03	1.6601	100.36	99.811	101.47	0.33295					136	41	4	0	0	0	0.64555	1	12082	12082		44.377	1.981	1	17274000			58387	3665	38975	38991	66246	66246					0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8102416992188	2	518.811116	1035.60768	2.1455	0.0011131	-3.5314	-0.0018321	-1.3859	-0.000719	518.809137673967	102.45	0.62791	102.71	102.31	102.94	0.26322					37	15	3	0	0	0	0.41566	1	12445	12445		56.721	10.749	1	1995300			58388	3665	38975	38991	66247	66247					0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8099975585938	2	518.811116	1035.60768	1.4869	0.00077141	-3.1709	-0.0016451	-1.684	-0.00087369	518.8094559796755	98.41	1.4425	98.787	98.408	99.851	0.37679					96	35	4	0	0	0	0.71772	1	11936	11936		39.253	0	1	12414000			58389	3665	38975	38991	66248	66248					0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	518.811116	1035.60768	-0.67988	-0.00035273	-1.0061	-0.00052199	-1.686	-0.00087471	518.810488402327	98.883	0.54355	98.883	98.678	99.222	0	0.29499	0.0016668	NaN	52.937	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70620			58390	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	518.811116	1035.60768	-0.044689	-2.3185E-05	-1.2882	-0.00066832	-1.3329	-0.0006915	518.8102612340814	102.83	0.3764	102.84	102.59	102.96	0.0082016	0.15221	0.0019534	NaN	56.721	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88353			58391	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	518.811116	1035.60768	-0.044931	-2.3311E-05	-1.2889	-0.00066869	-1.3338	-0.000692	518.8103469548735	98.458	0.74926	98.508	98.001	98.75	0.04982	-0.080336	0.0013734	NaN	52.937	36	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	333300			58392	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	518.811116	1035.60768	3.1407	0.0016294	-4.1816	-0.0021695	-1.041	-0.00054006	518.8086502271079	102.83	0.41826	102.78	102.5	102.91	-0.047005	0.095828	-0.0010489	NaN	56.721	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98421			58393	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	518.811116	1035.60768	2.6963	0.0013989	-4.1205	-0.0021378	-1.4242	-0.00073888	518.808859556884	98.382	0.61084	98.327	97.989	98.6	-0.054817	-0.26123	-0.0015648	NaN	52.937	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	293130			58394	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	518.811116	1035.60768	1.0671	0.00055363	-2.4308	-0.0012611	-1.3637	-0.00070751	518.8095924956172	102.69	0.37782	102.73	102.46	102.83	0.043198	0.040481	0.00076777	NaN	56.721	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93215			58395	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	518.811116	1035.60768	1.0725	0.00055641	-2.4282	-0.0012598	-1.3557	-0.00070336	518.8097154998884	98.257	0.6622	98.306	97.881	98.543	0.048164	-0.28259	0.0001912	NaN	52.937	36	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	279590			58396	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	518.811116	1035.60768	-0.22003	-0.00011416	-1.3413	-0.00069587	-1.5613	-0.00081002	518.8102628722297	102.35	0.59985	102.54	102.25	102.85	0.19484	-0.14669	0.0018983	NaN	56.721	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147100			58397	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	518.811116	1035.60768	-0.22849	-0.00011854	-1.3425	-0.00069649	-1.571	-0.00081503	518.8104542549984	96.256	0.9837	96.487	95.928	96.912	0.23103	-0.10474	0.00092924	NaN	56.721	35	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	170380			58398	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	518.811116	1035.60768	0.82108	0.00042599	-2.0719	-0.0010749	-1.2508	-0.00064892	518.8097591000223	102.47	0.6432	102.61	102.3	102.94	0.13523	-0.080442	0.0011402	NaN	56.721	28	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	168090			58399	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	518.811116	1035.60768	0.80153	0.00041584	-2.227	-0.0011554	-1.4255	-0.00073956	518.8097941481088	98.593	0.95907	98.75	98.276	99.235	0.15659	0.16146	0.00039995	NaN	52.937	53	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	827950			58400	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	518.811116	1035.60768	0.78116	0.00040528	-2.1293	-0.0011047	-1.3482	-0.00069945	518.809843001009	96.335	1.1609	96.499	95.891	97.052	0.16316	-0.092809	0.00011276	NaN	56.721	42	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132610			58401	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	518.811116	1035.60768	0.79554	0.00041274	-2.5765	-0.0013367	-1.781	-0.000924	518.8098582922045	97.944	0.74314	98.105	97.626	98.369	0.16074	-0.044273	-0.00058764	NaN	66.429	43	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	268240			58402	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	518.811116	1035.60768	-1.5537	-0.0008061	0.26926	0.00013969	-1.2845	-0.00066641	518.8110186073499	102.43	0.52462	102.56	102.37	102.9	0.13569	-0.1263	0.0035694	NaN	56.721	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	168330			58403	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	518.811116	1035.60768	-1.5537	-0.0008061	-0.056837	-2.9488E-05	-1.6106	-0.00083559	518.811015898988	96.482	1.0756	96.685	95.977	97.053	0.20242	0.093425	0.0022632	NaN	56.721	38	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	157940			58404	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	518.811116	1035.60768	-1.5537	-0.00080609	0.022078	1.1454E-05	-1.5316	-0.00079463	518.8109930408363	97.982	0.69793	98.177	97.679	98.377	0.19585	0.028025	0.0021087	NaN	66.429	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	282920			58405	3665	38975	38991							0.09130022231261137
TLKPNLTIH	9	Unmodified	_TLKPNLTIH_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	518.811116	1035.60768	2.8674	0.0014877	-4.3223	-0.0022425	-1.4549	-0.00075482	518.8087133842567	102.43	0.63333	102.73	102.35	102.98	0.29865	0.04135	-0.0011949	NaN	56.721	39	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1844600			58406	3665	38975	38991							0.09130022231261137
TLKQGIERVR	10	Unmodified	_TLKQGIERVR_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;ENST00000465703.5_1_6:31936641-31937206:+|nuORF;ENST00000470453.1_1_6:31936465-31937326:+|nuORF;ENST00000483553.5_1_6:31936441-31937206:+|nuORF	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.58026123046875	3	400.578811	1198.7146	3.1805	0.001274	0.74448	0.00029822	3.925	0.0015723	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.86647	1	12383	12383		28.577	4.0575	1	4827300			58407	8435	38976	38992	66249	66249					0.12319572445630911
TLKQGIERVR	10	Unmodified	_TLKQGIERVR_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;ENST00000465703.5_1_6:31936641-31937206:+|nuORF;ENST00000470453.1_1_6:31936465-31937326:+|nuORF;ENST00000483553.5_1_6:31936441-31937206:+|nuORF	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.5804138183594	3	400.578811	1198.7146	0.73408	0.00029406	3.5327	0.0014151	4.2667	0.0017092	400.5800545644303	111.89	0.61595	111.96	111.53	112.15	0.069542					52	18	4	0	0	0	0.86014	1	12009	12009		23.378	3.3474	1	4655100			58408	8435	38976	38992	66250	66250					0.12319572445630911
TLKQGIERVR	10	Unmodified	_TLKQGIERVR_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;ENST00000465703.5_1_6:31936641-31937206:+|nuORF;ENST00000470453.1_1_6:31936465-31937326:+|nuORF;ENST00000483553.5_1_6:31936441-31937206:+|nuORF	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.58074951171875	3	400.578811	1198.7146	3.4037	0.0013634	1.0118	0.0004053	4.4155	0.0017688	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.85441	1	13716	13716		20.837	0.52214	1	5321000			58409	8435	38976	38992	66251	66251					0.12319572445630911
TLKRGQPN	8	Unmodified	_TLKRGQPN_					0	0	0		ENSG00000134864|ENST00000683975|GGACT	ENSG00000134864|ENST00000683975|GGACT	ENSG00000134864|ENST00000683975|GGACT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26397705078125	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.86677	2	8051	8051;8147		27.882	2.4321	1	4511100			58410	3964	38977	38993	66252;66253	66252					0.05435722848858404
TLKRGQPN	8	Unmodified	_TLKRGQPN_					0	0	0		ENSG00000134864|ENST00000683975|GGACT	ENSG00000134864|ENST00000683975|GGACT	ENSG00000134864|ENST00000683975|GGACT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.26409912109375	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.87479	1	7967	7967		30.504	3.8107	1	4597500			58411	3964	38977	38993	66254	66254					0.05435722848858404
TLKRGQPN	8	Unmodified	_TLKRGQPN_					0	0	0		ENSG00000134864|ENST00000683975|GGACT	ENSG00000134864|ENST00000683975|GGACT	ENSG00000134864|ENST00000683975|GGACT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2638854980469	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.89043	1	9587	9587		35.618	1.4457	1	4402400			58412	3964	38977	38993	66255	66255					0.05435722848858404
TLKRSAHG	8	Unmodified	_TLKRSAHG_					0	0	0		ENST00000541245.1_2_17:38334535-38337880:+|nuORF	ENST00000541245.1_2_17:38334535-38337880:+|nuORF	ENST00000541245.1_2_17:38334535-38337880:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2520751953125	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.89494	1	8000	8000		37.159	0.13063	1	2743300			58413	13517	38978	38994	66256	66256					0.04839453677379879
TLKRSRMLT	9	Unmodified	_TLKRSRMLT_					0	0	0			REV__ENST00000474140.1_1_1:3809311-3816771:-|nuORF	REV__ENST00000474140.1_1_1:3809311-3816771:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.33154296875	2	553.32915	1104.64375	2.7435	0.0015181	3.1682	0.0017531	5.9118	0.0032712	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.7932	1	10579	10579		25.574	1.0549	1	4237100	+		58414	27293	38979	38995	66257	66257					0.09561156136487625
TLKSTPKT	8	Unmodified	_TLKSTPKT_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26397705078125	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.8537	1	2071	2071		25.574	1.3713	1	3507500			58415	5183	38980	38996	66258	66258					0.07010669040232642
TLKSTPKT	8	Unmodified	_TLKSTPKT_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26300048828125	2	438.263468	874.512382	-1.8646	-0.00081717	1.0768	0.00047194	-0.78773	-0.00034523	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.88185	1	2720	2720		32.812	6.1195	1	3384400			58416	5183	38980	38996	66259	66259					0.07010669040232642
TLKSTPKT	8	Unmodified	_TLKSTPKT_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26336669921875	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.90089	1	2439	2439		39.253	5.7372	1	3673500			58417	5183	38980	38996	66260	66260					0.07010669040232642
TLKSTPKT	8	Unmodified	_TLKSTPKT_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26361083984375	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.90523	1	2725	2725		40.778	3.6191	1	2361100			58418	5183	38980	38996	66261	66261					0.07010669040232642
TLKSTPKT	8	Unmodified	_TLKSTPKT_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26300048828125	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.8537	3	2727	2654;2727;2751		34.173	2.3088	1	22924000			58419	5183	38980	38996	66262;66263;66264	66263					0.07010669040232642
TLKSTPKT	8	Unmodified	_TLKSTPKT_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2633972167969	2	438.263468	874.512382	0.15263	6.689E-05	-0.38156	-0.00016722	-0.22893	-0.00010033	438.26336209695654	35.235	4.0651	35.341	35.139	39.204	0.10603					344	128	5	0	0	0	0.87422	1	1878	1878		30.318	1.1682	1	11370000			58420	5183	38980	38996	66265	66265					0.07010669040232642
TLKSTPKT	8	Unmodified	_TLKSTPKT_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2627258300781	2	438.263468	874.512382	0.27759	0.00012166	-1.0434	-0.00045727	-0.76577	-0.00033561	438.2634288938755	34.859	2.4173	35.069	34.482	36.899	0.21003					221	60	6	0	0	0	0.87422	2	2821	2725;2821		45.972	3.5761	1	85249000			58421	5183	38980	38996	66266;66267	66267					0.07010669040232642
TLKSTPKT	8	Unmodified	_TLKSTPKT_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2620849609375	2	438.263468	874.512382	1.5783	0.00069171	-2.4144	-0.0010581	-0.83609	-0.00036643	438.26285981646316	34.81	2.4503	35.192	34.523	36.973	0.3812					238	61	6	0	0	0	0.8537	1	2858	2858		25.574	0	1	92475000			58422	5183	38980	38996	66268	66268					0.07010669040232642
TLKTAVSN	8	Unmodified	_TLKTAVSN_					0	0	0			REV__ENSG00000038358|ENST00000358933|EDC4	REV__ENSG00000038358|ENST00000358933|EDC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2393798828125	2	417.239993	832.465432	-1.799	-0.00075061	-0.033577	-1.401E-05	-1.8326	-0.00076462	417.2397355139431	88.204	2.4422	88.405	87.8	90.242	0.20115					131	57	3	0	0	0	0.87792	2	8744	8744;8767		34.173	6.2903	1	1231700	+		58423	16303	38981	38997	66269;66270	66269					0.04249809489101608
TLKVVAPP	8	Unmodified	_TLKVVAPP_					0	0	0		ENST00000482397.1_1_7:50672830-50674105:-|nuORF	ENST00000482397.1_1_7:50672830-50674105:-|nuORF	ENST00000482397.1_1_7:50672830-50674105:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7672119140625	2	412.765646	823.516739	-1.3459	-0.00055553	3.4065	0.0014061	2.0606	0.00085056	412.76701040612045	40.372	1.7448	40.328	39.579	41.324	-0.043694					94	45	3	0	0	0	0.87479	1	3038	3038		30.504	3.7075	1	625910			58424	12486	38982	38998	66271	66271					0.0979217825380374
TLKWRKTQ	8	Unmodified	_TLKWRKTQ_					0	0	0		ENSG00000125485|ENST00000372159|DDX31;nc|ENSG00000125485|Q9H8H2-2|DDX31;nc|ENSG00000125485|Q9H8H2|DDX31	ENSG00000125485|ENST00000372159|DDX31	ENSG00000125485|ENST00000372159|DDX31	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.1806640625	2	530.816733	1059.61891	0.42534	0.00022578	-1.8106	-0.00096108	-1.3852	-0.0007353	530.8154550027156	31.563	0.51036	31.67	31.463	31.973	0.10707					15	11	2	0	0	0	0.4196	1	2159	2159		23.042	2.0956	1	84461			58425	3393	38983	38999	66272	66272					0.091488443254093
TLLADVLLV	9	Unmodified	_TLLADVLLV_					0	0	0			REV__chr11:47622776-47628953|35|13.14|0.58|4.51|-|2|MTCH2,MTCH2|1	REV__chr11:47622776-47628953|35|13.14|0.58|4.51|-|2|MTCH2,MTCH2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.80377197265625	2	478.804968	955.595384	-0.91897	-0.00044001	3.0146	0.0014434	2.0957	0.0010034	478.8062344602325	41.651	1.2493	41.655	41.077	42.326	0.0044022					74	33	3	0	0	0	0.7932	1	2736	2736		24.203	5.8783	1	258200	+		58426	15496	38984	39000	66273	66273					0.11580985768227947
TLLAGSRR	8	Unmodified	_TLLAGSRR_					0	0	0		ENST00000427442.6_1_20:42157961-42159515:+|nuORF	ENST00000427442.6_1_20:42157961-42159515:+|nuORF	ENST00000427442.6_1_20:42157961-42159515:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2650451660156	2	437.266876	872.519199	0.61137	0.00026733	-3.2	-0.0013992	-2.5886	-0.0011319	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.84341	1	910	910		24.203	2.5004	1	1313200			58427	11574	38985	39001	66274	66274					0.0778402671146523
TLLALYRAVCV	11	Unmodified	_TLLALYRAVCV_					0	0	0			REV__ENST00000310942.8_1_17:77760985-77761486:+|nuORF	REV__ENST00000310942.8_1_17:77760985-77761486:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3546142578125	2	611.354834	1220.69511	0.85003	0.00051967	1.0308	0.00063016	1.8808	0.0011498	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.66929	1	9530	9530		36.447	0	1	6836400	+		58428	24898	38986	39002	66275	66275					0.09359480110538243
TLLAPVIIS	9	Unmodified	_TLLAPVIIS_					0	0	0		ENST00000474873.5_1_10:100195027-100205113:-|nuORF;ENST00000467246.5_1_10:100191016-100205113:-|nuORF;nc|ENSG00000289758|Q92902-3|HPS1;nc|ENSG00000289758|Q92902-2|HPS1;ENSG00000107521|ENST00000361490|HPS1;ENST00000498219.5_1_10:100185741-100202985:-|nuORF;nc|ENSG00000289758|Q92902-4|HPS1	ENST00000474873.5_1_10:100195027-100205113:-|nuORF	ENST00000474873.5_1_10:100195027-100205113:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8001403808594	2	463.799686	925.584819	-1.1413	-0.00052933	2.885	0.001338	1.7437	0.00080871	463.8009223906452	41.714	1.3576	41.718	41.166	42.524	0.0043983					77	36	3	0	0	0	0.7932	1	2759	2759		17.365	0	1	388800			58429	2348	38987	39003	66276	66276					0.11905003113804469
TLLDLVLGI	9	Unmodified	_TLLDLVLGI_					0	0	0		ENST00000367941.6_1_6:132781444-132781717:-|nuORF	ENST00000367941.6_1_6:132781444-132781717:-|nuORF	ENST00000367941.6_1_6:132781444-132781717:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8047790527344	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.74721	2	2693	2693;2779		37.159	8.0096	1	371600			58430	10575	38988	39004	66277;66278	66277					0.11580985768216578
TLLDLVLGI	9	Unmodified	_TLLDLVLGI_					0	0	0		ENST00000367941.6_1_6:132781444-132781717:-|nuORF	ENST00000367941.6_1_6:132781444-132781717:-|nuORF	ENST00000367941.6_1_6:132781444-132781717:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8074645996094	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.664	1	39.616	39.116	40.116	-0.04789								0	0	0	0.32469	1	2449	2449		21.96	0	1				58431	10575	38988	39004	66279	66279					0.11580985768216578
TLLEGVIVL	9	Unmodified	_TLLEGVIVL_					0	0	0		ENSG00000151553|ENST00000369248|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80438232421875	2	478.804968	955.595384	-1.7281	-0.00082743	3.3413	0.0015998	1.6132	0.00077242	478.806439205216	41.295	1.2034	41.295	40.815	42.018	0					75	35	3	0	0	0	0.7932	1	2769	2769		18.324	0.95945	1	280900			58432	5125	38989	39005	66280	66280					0.11580985768239316
TLLEGVIVL	9	Unmodified	_TLLEGVIVL_					0	0	0		ENSG00000151553|ENST00000369248|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	ENSG00000151553|ENST00000369248|FHIP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8040771484375	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.7932	1	2867	2867		24.203	0	1	371600			58433	5125	38989	39005	66281	66281					0.11580985768239316
TLLFPSHVY	9	Unmodified	_TLLFPSHVY_					0	0	0		ENST00000380007.2_1_5:94956482-94957517:+|nuORF	ENST00000380007.2_1_5:94956482-94957517:+|nuORF	ENST00000380007.2_1_5:94956482-94957517:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.7896728515625	2	538.792392	1075.57023	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.77	1	59.864	59.364	60.364	0.094059								0	0	0	0.30053	1	5137	5137		30.504	3.7075	1				58434	10909	38990	39006	66282	66282					0.035469309656718906
TLLGGGHAL	9	Unmodified	_TLLGGGHAL_					0	0	0			REV__chr10:101064947-101067248|45|12.69|0.09|7.19|+|1|None,KAZALD1|1	REV__chr10:101064947-101067248|45|12.69|0.09|7.19|+|1|None,KAZALD1|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.7751159667969	2	419.742702	837.470852	-1.7741	-0.00074467	0.73327	0.00030778	-1.0409	-0.00043689	419.7429640822321	41.427	0.36444	41.841	41.647	42.011	0.4139					13	9	3	0	0	0	0.20789	1	3595	3595		17.365	0	1	393980	+		58435	15461	38991	39007	66283	66283					0.045615330715691016
TLLGLKKLSF	10	Unmodified	_TLLGLKKLSF_					0	0	0		ENSG00000175899|ENST00000318602|A2M;ENST00000472360.1_1_12:9251139-9254147:-|nuORF	ENSG00000175899|ENST00000318602|A2M	ENSG00000175899|ENST00000318602|A2M	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.7693481445312	2	560.360442	1118.70633	0.44374	0.00024865	-1.7678	-0.00099059	-1.324	-0.00074193	560.860991638491	48.935	0.40492	49.839	49.607	50.012	0.90424					12	9	2	0	0	0	0.37624	1	4767	4767		24.519	0	1	127440			58436	7043	38992	39008	66284	66284					0.1517262547631617
TLLGSVLPL	9	Unmodified	_TLLGSVLPL_					0	0	0			REV__ENST00000412686.5_1_7:99037063-99040649:+|nuORF	REV__ENST00000412686.5_1_7:99037063-99040649:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.30267333984375	2	456.791861	911.569169	-2.8446	-0.0012994	3.6569	0.0016705	0.81235	0.00037108	456.79337927026637	41.437	2.022	41.851	41.294	43.316	0.4139					109	52	4	0	0	0	0.20789	1	3693	3693		16.473	0	1	8003100	+		58437	26386	38993	39009	66285	66285					0.10984716596760791
TLLGVIPK	8	Unmodified	_TLLGVIPK_					0	0	0		ENST00000471885.5_1_3:167437998-167452599:-|nuORF	ENST00000471885.5_1_3:167437998-167452599:-|nuORF	ENST00000471885.5_1_3:167437998-167452599:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.78314208984375	2	420.781296	839.54804	-0.87397	-0.00036775	4.4545	0.0018744	3.5805	0.0015066	420.78302036685494	36.198	1.3548	36.142	35.56	36.914	-0.055904					70	29	3	0	0	0	0.85277	1	2444	2444		25.45	1.2474	1	127960			58438	12251	38994	39010	66286	66286					0.12184751287895779
TLLIFIAVSL	10	Unmodified	_TLLIFIAVSL_					0	0	0			REV__ENSG00000198937|ENST00000373408|CCDC167	REV__ENSG00000198937|ENST00000373408|CCDC167	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.316650390625	2	545.349543	1088.68453	-1.4674	-0.00080024	2.3635	0.001289	0.89615	0.00048872	545.3508047191758	90.061	0.59855	90.237	89.912	90.511	0.1758					14	13	2	0	0	0	0.37624	1	8925	8925		19.997	0	1	62849	+		58439	23423	38995	39011	66287	66287					0.14373820727746534
TLLIHLLSHF	10	Unmodified	_TLLIHLLSHF_					0	0	0			REV__ENSG00000173679|ENST00000309623|OR1L1	REV__ENSG00000173679|ENST00000309623|OR1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3643188476562	2	597.355691	1192.69683	3.0849	0.0018428	1.4245	0.00085092	4.5094	0.0026937	597.3562180293547	100.36	3.052	100.31	99.202	102.25	-0.052116					175	71	4	0	0	0	0.85694	1	10987	10987		21.96	2.8564	1	3981300	+		58440	21943	38996	39012	66288	66288					0.10818857190793096
TLLIYRRLRKP	11	Unmodified	_TLLIYRRLRKP_					0	0	0		nc|ENSG00000122224|Q9HBG7-2|LY9;nc|ENSG00000122224|Q9HBG7-4|LY9;ENSG00000122224|ENST00000263285|LY9	nc|ENSG00000122224|Q9HBG7-2|LY9	nc|ENSG00000122224|Q9HBG7-2|LY9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.3041687011719	3	476.976906	1427.90889	0.48336	0.00023055	-4.199	-0.0020028	-3.7157	-0.0017723	477.3091885919603	67.828	0.11445	67.956	67.894	68.008	0.12748					6	4	2	0	0	0	0.18238	1	6077	6077		9.2118	0	1	53122			58441	3215	38997	39013	66289	66289					0.2120494860157578
TLLKKMISA	9	Unmodified	_TLLKKMISA_					0	0	0			REV__ENST00000488412.2_1_9:34648936-34649266:+|nuORF	REV__ENST00000488412.2_1_9:34648936-34649266:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.8139953613281	2	502.81227	1003.60999	1.4802	0.00074428	1.8169	0.00091354	3.2971	0.0016578	502.81319262622696	97.079	3.8751	97.469	96.863	100.74	0.39065					217	95	5	0	0	0	0.7932	1	11660	11660		21.96	0.25755	1	11311000	+		58442	23638	38998	39014	66290	66290					0.10832734644736774
TLLKLIPE	8	Unmodified	_TLLKLIPE_					0	0	0			REV__nc|ENSG00000186462|Q9ULW6-2|NAP1L2	REV__nc|ENSG00000186462|Q9ULW6-2|NAP1L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.80035400390625	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.80706	1	2958	2958		19.36	5.5846	1	1231300	+		58443	22855	38999	39015	66291	66291					0.11905003113815837
TLLLALPLP	9	Unmodified	_TLLLALPLP_					0	0	0		nc|ENSG00000283706|Q9UI38|PRSS50	nc|ENSG00000283706|Q9UI38|PRSS50	nc|ENSG00000283706|Q9UI38|PRSS50	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	475.8186340332031	2	475.817879	949.621205	-1.7705	-0.00084244	3.3194	0.0015794	1.5488	0.00073697	475.8196247358917	39.531	1.3725	39.531	38.941	40.314	0					55	33	3	0	0	0	0.7932	1	2525	2525		12.959	0	1	82988			58444	15322	39000	39016	66292	66292					0.1443788001053008
TLLLCLKSY	9	Unmodified	_TLLLCLKSY_					0	0	0			REV__nc|ENSG00000085433|O94967-2|WDR47	REV__nc|ENSG00000085433|O94967-2|WDR47	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3060913085938	2	527.304278	1052.594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.04	1	104.3	103.8	104.8	0.26524								0	0	0	0.30053	1	12702	12702		30.504	5.0535	1		+		58445	16889	39001	39017	66293	66293					0.06981028407835765
TLLLDAVAL	9	Unmodified	_TLLLDAVAL_					0	0	0			REV__ENSG00000120907|ENST00000380573|ADRA1A;REV__nc|ENSG00000120907|P35348-7|ADRA1A	REV__nc|ENSG00000120907|P35348-7|ADRA1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7910461425781	2	464.789318	927.564084	-0.88537	-0.00041151	3.8254	0.001778	2.94	0.0013665	464.79098266785445	37.031	1.7451	36.978	35.836	37.581	-0.053558					86	38	3	0	0	0	0.77546	1	2408	2408		31.955	0	1	298640	+		58446	18436;29812	39002	39018	66294	66294					0.09740412734140591
TLLLGMVELLI	11	Unmodified	_TLLLGMVELLI_					0	0	0		ENST00000523702.5_1_2:211438076-211442208:+|nuORF	ENST00000523702.5_1_2:211438076-211442208:+|nuORF	ENST00000523702.5_1_2:211438076-211442208:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2568664550781	3	405.585804	1213.73558	0.73634	0.00029865	3.3926	0.001376	4.129	0.0016747	405.58700116619144	32.903	0.93179	33.114	32.55	33.482	0.21168					33	21	2	0	0	0	0.17375	1	2329	2329		13.508	6.4893	1	149820			58447	13204	39003	39019	66295	66295					0.13726401710323444
TLLLGMVELLI	11	Unmodified	_TLLLGMVELLI_					0	0	0		ENST00000523702.5_1_2:211438076-211442208:+|nuORF	ENST00000523702.5_1_2:211438076-211442208:+|nuORF	ENST00000523702.5_1_2:211438076-211442208:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	405.585804	1213.73558	1.2652	0.00051315	3.336	0.001353	4.6012	0.0018662	405.58703988092685	32.859	0.80959	33.018	32.578	33.388	0.15832	-0.04845	-3.3031E-05	NaN	13.508	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111240			58448	13204	39003	39019							0.13726401710323444
TLLLILTTTG	10	Unmodified	_TLLLILTTTG_					0	0	0		ENSG00000204160|ENST00000374142|ZDHHC18	ENSG00000204160|ENST00000374142|ZDHHC18	ENSG00000204160|ENST00000374142|ZDHHC18	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.328808	1044.64306	-0.8073	-0.00042248	4.3112	0.0022562	3.5039	0.0018337	523.3304363775161	88.582	0.1649	88.582	88.465	88.63	0					5	3	2	0	0	0	0.37624	1	8538	8538		20.947	3.582	1	30552			58449	8419	39004	39020	66296	66296					0.12252639968414769
TLLLLMSLN	9	Unmodified	_TLLLLMSLN_					0	0	0			REV__ENSG00000139133|ENST00000266483|ALG10	REV__ENSG00000139133|ENST00000266483|ALG10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.3057861328125	2	509.304278	1016.594	0.38214	0.00019463	2.5317	0.0012894	2.9139	0.001484	509.30545060509706	93	1.7659	93.046	92.369	94.135	0.045448					129	41	4	0	0	0	0.7932	1	9818	9818		21.96	0.27414	1	3009900	+		58450	19518	39005	39021	66297	66297					0.08637028407827074
TLLLNMHV	8	Unmodified	_TLLLNMHV_					0	0	0		ENST00000379066.5_1_2:37479395-37479560:-|nuORF	ENST00000379066.5_1_2:37479395-37479560:-|nuORF	ENST00000379066.5_1_2:37479395-37479560:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7688903808594	2	470.767863	939.521173	-0.039118	-1.8416E-05	2.4696	0.0011626	2.4305	0.0011442	470.76888428229023	53.107	1.8265	53.104	52.614	54.44	-0.0033035					119	53	3	0	0	0	0.884	1	4705	4705		33.516	1.9858	1	1606400			58451	10882	39006	39022	66298	66298					0.04899319405069491
TLLLQLQAH	9	Unmodified	_TLLLQLQAH_					0	0	0		ENSG00000166341|ENST00000299441|DCHS1	ENSG00000166341|ENST00000299441|DCHS1	ENSG00000166341|ENST00000299441|DCHS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.810791015625	2	518.811116	1035.60768	2.0333	0.0010549	-3.5591	-0.0018465	-1.5258	-0.00079161	518.8092333336378	100.03	1.6601	100.36	99.811	101.47	0.33295					136	41	4	0	0	0	0.38563	1	12130	12130		58.782	9.3404	1	17274000			58452	6180	39007	39023	66299	66299					0.09130022231261137
TLLLQSGLV	9	Unmodified	_TLLLQSGLV_					0	0	0		ENST00000475645.1_1_6:106634320-106634398:-|nuORF	ENST00000475645.1_1_6:106634320-106634398:-|nuORF	ENST00000475645.1_1_6:106634320-106634398:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2957458496094	2	472.294768	942.574983	0.080259	3.7906E-05	-0.16186	-7.6447E-05	-0.081603	-3.8541E-05	472.29445478655197	32.682	0.40992	32.693	32.492	32.902	0.010902					18	10	2	0	0	0	0.77546	1	1857	1857		31.955	0	1	23741			58453	12328	39008	39024	66300	66300					0.1013981510842541
TLLLQSGLV	9	Unmodified	_TLLLQSGLV_					0	0	0		ENST00000475645.1_1_6:106634320-106634398:-|nuORF	ENST00000475645.1_1_6:106634320-106634398:-|nuORF	ENST00000475645.1_1_6:106634320-106634398:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	472.294768	942.574983	-1.0843	-0.0005121	-0.39174	-0.00018502	-1.476	-0.00069712	472.2944715066274	32.662	0.50096	32.66	32.446	32.947	-0.0016365	-0.063306	-0.00027839	NaN	31.955	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54500			58454	12328	39008	39024							0.1013981510842541
TLLLSIPVT	9	Unmodified	_TLLLSIPVT_					0	0	0		nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA	nc|ENSG00000164944|Q69YN4-2|VIRMA	nc|ENSG00000164944|Q69YN4-2|VIRMA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.8038635253906	2	478.804968	955.595384	0.22693	0.00010865	2.6093	0.0012493	2.8362	0.001358	478.8061448766097	39.22	1.8064	39.308	38.205	40.011	0.088375					88	52	2	0	0	0	0.7932	1	2461	2461		21.96	1.4781	1	295310			58455	6028	39009	39025	66301	66301					0.11580985768239316
TLLLSPLVT	9	Unmodified	_TLLLSPLVT_					0	0	0		ENST00000541180.1_1_16:71958590-71961713:+|nuORF	ENST00000541180.1_1_16:71958590-71961713:+|nuORF	ENST00000541180.1_1_16:71958590-71961713:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8056945800781	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.78536	1	2620	2620		29.15	4.9468	1	336090			58456	13515	39010	39026	66302	66302					0.11580985768239316
TLLLSPLVT	9	Unmodified	_TLLLSPLVT_					0	0	0		ENST00000541180.1_1_16:71958590-71961713:+|nuORF	ENST00000541180.1_1_16:71958590-71961713:+|nuORF	ENST00000541180.1_1_16:71958590-71961713:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80548095703125	2	478.804968	955.595384	0.30032	0.0001438	1.2686	0.0006074	1.5689	0.0007512	478.8054155827557	41.804	1.1764	41.773	41.067	42.244	-0.030991					72	29	3	0	0	0	0.7932	1	3088	3088		21.96	0	1	345190			58457	13515	39010	39026	66303	66303					0.11580985768239316
TLLLSPLVT	9	Unmodified	_TLLLSPLVT_					0	0	0		ENST00000541180.1_1_16:71958590-71961713:+|nuORF	ENST00000541180.1_1_16:71958590-71961713:+|nuORF	ENST00000541180.1_1_16:71958590-71961713:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.806884765625	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.332	1	42.303	41.803	42.803	-0.029461								0	0	0	0.30613	1	3154	3154		42.396	0	1				58458	13515	39010	39026	66304	66304					0.11580985768239316
TLLLSPLVTIF	11	Unmodified	_TLLLSPLVTIF_					0	0	0		ENST00000541180.1_1_16:71958590-71961713:+|nuORF	ENST00000541180.1_1_16:71958590-71961713:+|nuORF	ENST00000541180.1_1_16:71958590-71961713:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5648193359375	3	406.256564	1215.74786	-1.8655	-0.00075787	0.31684	0.00012872	-1.5487	-0.00062915	406.2575566956887	60.123	0.82175	60.217	59.639	60.461	0.094059					37	25	2	0	0	0	0.17606	1	5132	5132		14.086	0	1	208460			58459	13515	39011	39027	66305	66305					0.14861761444990407
TLLLVQVEP	9	Unmodified	_TLLLVQVEP_					0	0	0			REV__ENSG00000103365|ENST00000309859|GGA2	REV__ENSG00000103365|ENST00000309859|GGA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3094787597656	2	506.307875	1010.6012	0.13031	6.5978E-05	2.2512	0.0011398	2.3815	0.0012058	506.3090702078247	39.447	1.2074	39.394	38.87	40.077	-0.052731					48	32	2	0	0	0	0.76764	1	2423	2423		34.173	6.2903	1	139930	+		58460	17411	39012	39028	66306	66306					0.09632084279905939
TLLLVRAAREQ	11	Unmodified	_TLLLVRAAREQ_					0	0	0			REV__ENST00000480415.5_1_10:21823687-21860921:+|nuORF	REV__ENST00000480415.5_1_10:21823687-21860921:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	635.3902587890625	2	635.385511	1268.75647	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.16	1	107.19	106.69	107.69	0.035622								0	0	0	0.56276	1	11756	11756		40.058	3.6114	1		+		58461	27417	39013	39029	66307	66307					0.13284128134182538
TLLNIPIK	8	Unmodified	_TLLNIPIK_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3008728027344	2	456.299853	910.585153	0.17352	7.9178E-05	1.8885	0.00086173	2.062	0.00094091	456.30054777495894	45.254	1.9566	45.236	44.141	46.098	-0.018585					90	45	3	0	0	0	0.86288	1	3594	3594		26.796	0	1	417410			58462	1742	39014	39030	66308	66308					0.1262842283366581
TLLNLVWRDS	10	Unmodified	_TLLNLVWRDS_					0	0	0		nc|ENSG00000009335|Q15386-3|UBE3C;nc|ENSG00000009335|Q15386-2|UBE3C;ENSG00000009335|ENST00000348165|UBE3C	nc|ENSG00000009335|Q15386-3|UBE3C	nc|ENSG00000009335|Q15386-3|UBE3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	608.8374633789062	2	608.837862	1215.66117	-1.2606	-0.00076749	0.27958	0.00017022	-0.981	-0.00059727	608.8379314653004	110.3	0.94635	110.3	110.1	111.04	-0.0074387					59	30	4	0	0	0	0.86218	1	11779	11779		32.812	1.2826	1	2774900			58463	753	39015	39031	66309	66309					0.061967749431460106
TLLNPCALC	9	Unmodified	_TLLNPCALC_					0	0	0			REV__ENST00000374843.8_1_6:32918343-32920806:-|nuORF	REV__ENST00000374843.8_1_6:32918343-32920806:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.2391662597656	2	474.238081	946.461609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.031	1	22.979	22.479	23.479	-0.052114								0	0	0	0.28386	1	786	786		37.159	2.9866	1		+		58464	25801	39016	39032	66310	66310					-0.013763196006266298
TLLPLLLPI	9	Unmodified	_TLLPLLLPI_					0	0	0			REV__nc|ENSG00000211659|P01717|IGLV3-25	REV__nc|ENSG00000211659|P01717|IGLV3-25	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.8385009765625	2	496.841354	991.668155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.81	1	74.766	74.266	75.266	-0.043877								0	0	0	0.33301	1	7355	7355		19.36	0	1		+		58465	30180	39017	39033	66311	66311					0.17198739561661114
TLLPSLLLLL	10	Unmodified	_TLLPSLLLLL_					0	0	0			REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.37451171875	2	548.373018	1094.73148	-1.4498	-0.00079504	3.6321	0.0019917	2.1823	0.0011967	548.3748802153438	35.47	1.1138	35.47	34.867	35.98	0					77	29	3	0	0	0	0.88541	2	1974	1934;1974		11.511	0	1	301910	+		58466	26832	39018	39034	66312;66313	66313					0.18790680278902983
TLLPSLLLLL	10	Unmodified	_TLLPSLLLLL_					0	0	0			REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3737182617188	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.85438	1	2593	2593		16.473	0	1	314410	+		58467	26832	39018	39034	66314	66314					0.18790680278902983
TLLPSLLLLL	10	Unmodified	_TLLPSLLLLL_					0	0	0			REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.3756713867188	2	548.373018	1094.73148	-0.26655	-0.00014617	2.6931	0.0014768	2.4265	0.0013306	548.374310727377	37.412	2.4822	37.359	36.203	38.685	-0.053558					161	55	4	0	0	0	0.88945	1	2630	2630		10.866	0	1	654980	+		58468	26832	39018	39034	66315	66315					0.18790680278902983
TLLPSLLLLL	10	Unmodified	_TLLPSLLLLL_					0	0	0			REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.3739624023438	2	548.373018	1094.73148	0.10149	5.5656E-05	2.2515	0.0012346	2.353	0.0012903	548.3739291266121	36.797	0.76149	36.82	36.228	36.989	0.023624					53	21	3	0	0	0	0.85958	1	2069	2069		15.642	4.1308	1	226620	+		58469	26832	39018	39034	66316	66316					0.18790680278902983
TLLPSLLLLL	10	Unmodified	_TLLPSLLLLL_					0	0	0			REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.3742065429688	2	548.373018	1094.73148	0.10207	5.5971E-05	2.4087	0.0013209	2.5108	0.0013769	548.3742221063811	37.296	1.0877	37.32	36.95	38.037	0.023621					64	31	3	0	0	0	0.88945	1	2148	2148		10.866	3.6722	1	318790	+		58470	26832	39018	39034	66317	66317					0.18790680278902983
TLLPSLLLLL	10	Unmodified	_TLLPSLLLLL_					0	0	0			REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	REV__ENST00000447998.6_1_5:150090483-150090537:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	548.3746337890625	2	548.373018	1094.73148	0.27438	0.00015046	2.33	0.0012777	2.6044	0.0014282	548.3741056570226	37.106	1.654	37.206	36.174	37.827	0.099277					123	52	3	0	0	0	0.88945	1	2097	2097		10.866	0	1	393850	+		58471	26832	39018	39034	66318	66318					0.18790680278902983
TLLRFELLPDP	11	Unmodified	_TLLRFELLPDP_					0	0	0		ENSG00000187048|ENST00000310638|CYP4A11;ENSG00000162365|ENST00000371891|CYP4A22	ENSG00000187048|ENST00000310638|CYP4A11	ENSG00000187048|ENST00000310638|CYP4A11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.5855712890625	3	438.586972	1312.73909	0.62249	0.00027302	-3.9502	-0.0017325	-3.3278	-0.0014595	438.58531704685663	31.503	0.98428	31.61	31.29	32.274	0.10707					45	22	3	0	0	0	0.67762	1	2167	2167		35.178	1.2566	1	2540100			58472	7836	39019	39035	66319	66319					0.09522787808532485
TLLSAPPTML	10	Oxidation (M)	_TLLSAPPTM(Oxidation (M))L_		TLLSAPPTM(1)L		TLLSAPPTM(49)L	0	0	1			REV__ENST00000303391.10_2_X:153293219-153293288:-|nuORF	REV__ENST00000303391.10_2_X:153293219-153293288:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.29345703125	2	530.291368	1058.56818	-0.066725	-3.5384E-05	3.8245	0.0020281	3.7578	0.0019927	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.6116	1	9115	9115		49.442	12.282	1	2084800	+		58473	24801	39020	39036	66320	66320		387			0.04124134165522264
TLLSDLWTAD	10	Unmodified	_TLLSDLWTAD_					0	0	0			REV__ENST00000472045.1_1_5:131819645-131819816:-|nuORF	REV__ENST00000472045.1_1_5:131819645-131819816:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3298950195312	2	567.787504	1133.56045	1.8342	0.0010415	-0.53586	-0.00030425	1.2984	0.0007372	568.2874863071734	92.846	0.70957	92.782	92.375	93.085	-0.06414					22	16	2	0	0	0	0.37624	1	9826	9826		31.53	0	1	62683	+		58474	18636	39021	39037	66321	66321					-0.0009830183039412077
TLLSLVPTL	9	Unmodified	_TLLSLVPTL_					0	0	0			REV__nc|ENSG00000111785|Q9NVN3-4|RIC8B	REV__nc|ENSG00000111785|Q9NVN3-4|RIC8B	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8048400878906	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.441	1	42.441	41.941	42.941	0								0	0	0	0.30778	1	2942	2942		27.882	4.8398	1		+		58475	17894	39022	39038	66322	66322					0.11580985768239316
TLLSLVPTL	9	Unmodified	_TLLSLVPTL_					0	0	0			REV__nc|ENSG00000111785|Q9NVN3-4|RIC8B	REV__nc|ENSG00000111785|Q9NVN3-4|RIC8B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80535888671875	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.7932	1	2816	2816		21.96	0	1	371600	+		58476	17894	39022	39038	66323	66323					0.11580985768239316
TLLSNQQIYT	10	Unmodified	_TLLSNQQIYT_					0	0	0		nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	nc|ENSG00000166833|Q8IVL1-12|NAV2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8668212890625	2	590.814053	1179.61355	-0.64452	-0.00038079	-0.56883	-0.00033607	-1.2134	-0.00071687	590.8156439209437	103.59	0.43527	103.58	103.35	103.78	-0.0035706					13	10	2	0	0	0	0.37624	1	11110	11110		42.864	0	1	124810			58477	15072	39023	39039	66324	66324					0.030930759523016604
TLLSTGPPN	9	Unmodified	_TLLSTGPPN_					0	0	0			REV__ENSG00000166341|ENST00000299441|DCHS1	REV__ENSG00000166341|ENST00000299441|DCHS1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2744140625	2	450.245275	898.475997	1.3305	0.00059904	-2.8269	-0.0012728	-1.4964	-0.00067376	450.24392454836715	92.771	0.16859	92.816	92.668	92.837	0.045448					5	3	2	0	0	0	0.20789	1	9690	9690		44.377	3.599	1	54320	+		58478	21281	39024	39040	66325	66325					0.022697921435337776
TLLSVPLGL	9	Unmodified	_TLLSVPLGL_					0	0	0			REV__ENSG00000257008|ENST00000582579|GPR142	REV__ENSG00000257008|ENST00000582579|GPR142	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79302978515625	2	456.791861	911.569169	-1.2516	-0.0005717	4.1535	0.0018973	2.9019	0.0013256	456.7936304493402	37.846	1.122	37.863	37.475	38.597	0.016563					101	34	4	0	0	0	0.7932	1	2186	2186		23.042	0	1	1324300	+		58479	23914	39025	39041	66326	66326					0.10984716596760791
TLLTRRGGG	9	Unmodified	_TLLTRRGGG_					0	0	0			REV__ENST00000254868.8_2_17:6978245-6978371:-|nuORF	REV__ENST00000254868.8_2_17:6978245-6978371:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77716064453125	2	465.777608	929.540663	-1.4399	-0.00067067	1.3241	0.00061674	-0.1158	-5.3938E-05	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.7932	1	7573	7573		19.997	2.6318	1	287800	+		58480	24313	39026	39042	66327	66327					0.07307411740191583
TLLVAVNFGI	10	Unmodified	_TLLVAVNFGI_					0	0	0			REV__ENSG00000198838|ENST00000634891|RYR3;REV__ENSG00000198626|ENST00000366574|RYR2;REV__nc|ENSG00000196218|P21817-3|RYR1	REV__ENSG00000198626|ENST00000366574|RYR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.8208618164062	2	523.815867	1045.61718	4.827	0.0025285	3.9666	0.0020778	8.7936	0.0046062	523.817971029501	107.71	0.79254	107.82	107.14	107.94	0.11715					48	31	2	0	0	0	0.8608	1	13173	13173		34.173	0	1	567820	+		58481	23393;23347;23105	39027	39043	66328	66328					0.0961979051680828
TLLVCCLLTPA	11	Unmodified	_TLLVCCLLTPA_					0	0	0		ENST00000589580.1_1_19:10449837-10450290:-|nuORF	ENST00000589580.1_1_19:10449837-10450290:-|nuORF	ENST00000589580.1_1_19:10449837-10450290:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.817626953125	2	573.816696	1145.61884	0.47618	0.00027324	0.10688	6.1328E-05	0.58305	0.00033457	573.8166032618375	36.182	1.0397	36.213	35.726	36.765	0.031132					71	29	3	0	0	0	0.66929	1	1994	1994		36.447	0.82846	1	967530			58482	14239	39028	39044	66329	66329					0.05185340218895362
TLLVIAEVV	9	Unmodified	_TLLVIAEVV_					0	0	0			REV__ENSG00000168038|ENST00000301831|ULK4	REV__ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80511474609375	2	478.804968	955.595384	0.30032	0.0001438	1.2686	0.0006074	1.5689	0.0007512	478.8054155827557	41.804	1.1764	41.773	41.067	42.244	-0.030991					72	29	3	0	0	0	0.74721	1	3020	3020		37.159	0	1	345190	+		58483	21454	39029	39045	66330	66330					0.11580985768239316
TLLVIEGRHR	10	Unmodified	_TLLVIEGRHR_					0	0	0		chr19:36215020-36218122|33|19.09|0.98|4.29|+|2|None,ZNF146|2	chr19:36215020-36218122|33|19.09|0.98|4.29|+|2|None,ZNF146|2	chr19:36215020-36218122|33|19.09|0.98|4.29|+|2|None,ZNF146|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.3607788085938	2	597.359296	1192.70404	-0.56757	-0.00033904	-1.0155	-0.00060663	-1.5831	-0.00094568	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.8651	1	10770	10770		25.574	3.6142	1	3951300			58484	273	39030	39046	66331	66331					0.11539589791232174
TLLVPLLVAL	10	Unmodified	_TLLVPLLVAL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3610229492188	2	526.359911	1050.70527	-0.016718	-8.7995E-06	2.2479	0.0011832	2.2312	0.0011744	526.3609420824897	35.324	1.4285	35.312	34.729	36.157	-0.012199					134	33	5	0	0	0	0.8488	1	2205	2205		17.365	0	1	5338900			58485	2433	39031	39047	66332	66332					0.18194411107424457
TLLVPLLVAL	10	Unmodified	_TLLVPLLVAL_					0	0	0		ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	ENSG00000108823|ENST00000262018|SGCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3611450195312	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.8488	1	2422	2422		17.365	0	1	781950			58486	2433	39031	39047	66333	66333					0.18194411107424457
TLLVPSLLA	9	Unmodified	_TLLVPSLLA_					0	0	0			REV__ENST00000268719.8_1_17:17968924-17969182:+|nuORF	REV__ENST00000268719.8_1_17:17968924-17969182:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8001403808594	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.7932	1	3636	3636		23.042	0	1	269820	+		58487	24517	39032	39048	66334	66334					0.11905003113815837
TLLVPSLLA	9	Unmodified	_TLLVPSLLA_					0	0	0			REV__ENST00000268719.8_1_17:17968924-17969182:+|nuORF	REV__ENST00000268719.8_1_17:17968924-17969182:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.7998352050781	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	1	3719	3719		17.365	0	1	1294000	+		58488	24517	39032	39048	66335	66335					0.11905003113815837
TLLVPSLLA	9	Unmodified	_TLLVPSLLA_					0	0	0			REV__ENST00000268719.8_1_17:17968924-17969182:+|nuORF	REV__ENST00000268719.8_1_17:17968924-17969182:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8006286621094	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	2935	2935		23.042	0	1	1231300	+		58489	24517	39032	39048	66336	66336					0.11905003113815837
TLLVVSLIY	9	Unmodified	_TLLVVSLIY_					0	0	0			REV__ENSG00000145860|ENST00000424310|RNF145	REV__ENSG00000145860|ENST00000424310|RNF145	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8203125	2	510.820618	1019.62668	0.72356	0.00036961	-1.7932	-0.00091601	-1.0696	-0.0005464	510.81978429305985	94.733	0.77902	95.153	94.808	95.587	0.41963					52	18	4	0	0	0	0.18566	1	11354	11354		76.847	5.4687	1	885090	+		58490	19972	39033	39049	66337	66337					0.11765558802335363
TLLWRPAIL	9	Unmodified	_TLLWRPAIL_					0	0	0			REV__ENSG00000167757|ENST00000453757|KLK11	REV__ENSG00000167757|ENST00000453757|KLK11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	540.860107421875	2	541.839677	1081.6648	0.012225	6.6241E-06	-4.0972	-0.00222	-4.0849	-0.0022134	541.8374072302863	36.547	0.80527	36.493	36.112	36.917	-0.053558					26	17	2	0	0	0	0.20789	1	2454	2454		12.207	0.69583	1	57434	+		58491	21427	39034	39050	66338	66338					0.1272348950765263
TLMPVAKPT	9	Unmodified	_TLMPVAKPT_					0	0	0			REV__nc|ENSG00000064042|Q9UPQ0-10|LIMCH1	REV__nc|ENSG00000064042|Q9UPQ0-10|LIMCH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2779846191406	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.55097	2	10079	10079;10090		49.442	6.2817	1	5642300	+		58492	29699	39035	39051	66339;66340	66339					0.05648186202256511
TLNAKEIVVF	10	Unmodified	_TLNAKEIVVF_					0	0	0		nc|ENSG00000132640|Q9Y2F9-2|BTBD3;ENSG00000132640|ENST00000378226|BTBD3	nc|ENSG00000132640|Q9Y2F9-2|BTBD3	nc|ENSG00000132640|Q9Y2F9-2|BTBD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3294067382812	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.86218	1	9681	9681		32.812	0	1	15673000			58493	3813	39036	39052	66341	66341					0.0881915819995811
TLNGRRLP	8	Unmodified	_TLNGRRLP_					0	0	0		ENSG00000006016|ENST00000392386|CRLF1	ENSG00000006016|ENST00000392386|CRLF1	ENSG00000006016|ENST00000392386|CRLF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.77911376953125	2	463.780151	925.545748	-0.87225	-0.00040453	-0.71824	-0.00033311	-1.5905	-0.00073764	463.7798455403882	38.467	1.081	38.99	38.633	39.714	0.52235					66	25	3	0	0	0	0.91005	1	3248	3248		42.474	1.9018	1	2514600			58494	691	39037	39053	66342	66342					0.07999715602795732
TLNKRYRHM	9	Unmodified	_TLNKRYRHM_					0	0	0			REV__chrX:101145199-101146153|62|27.95|0.99|4.82|+|ENST00000423383|CENPI,CENPI	REV__chrX:101145199-101146153|62|27.95|0.99|4.82|+|ENST00000423383|CENPI,CENPI	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7853698730469	3	406.888991	1217.64514	0.13749	5.5942E-05	-3.6281	-0.0014762	-3.4906	-0.0014203	406.88739402109485	29.493	0.69104	29.464	29.171	29.862	-0.029207					30	15	3	0	0	0	0.20789	1	1886	1886		18.262	2.2553	1	176070	+		58495	15941	39038	39054	66343	66343					0.04502790225228637
TLNLTRSH	8	Unmodified	_TLNLTRSH_					0	0	0			REV__ENSG00000152580|ENST00000282466|IGSF10	REV__ENSG00000152580|ENST00000282466|IGSF10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7687683105469	2	471.261791	940.509028	-0.50369	-0.00023737	-2.2626	-0.0010663	-2.7663	-0.0013037	471.2586386864503	48.772	0.96807	49.677	49.085	50.053	0.90424					43	23	3	0	0	0	0.4196	1	4706	4706		23.042	1.0826	1	1049300	+		58496	20306	39039	39055	66344	66344					0.036394189862335224
TLNMLQLVRCV	11	Unmodified	_TLNMLQLVRCV_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	645.8847045898438	2	645.35705	1288.69955	-0.0054692	-3.5296E-06	-0.25252	-0.00016296	-0.25798	-0.00016649	645.3571025381327	105.91	0.991	105.88	105.4	106.39	-0.025146					40	23	2	0	0	0	0.17415	1	11473	11473		27.047	0	1	165740	+		58497	18858	39040	39056	66345	66345					0.06674621261799984
TLNSSKKKGL	10	Unmodified	_TLNSSKKKGL_					0	0	0			REV__nc|ENSG00000134900|P29144|TPP2	REV__nc|ENSG00000134900|P29144|TPP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3268432617188	2	538.327131	1074.63971	1.246	0.00067074	-0.83374	-0.00044882	0.41224	0.00022192	538.3266661650491	104.62	1.1683	104.66	104.04	105.21	0.039856					83	27	4	0	0	0	0.86471	1	11433	11433		30.318	6.115	1	814780	+		58498	19176	39041	39057	66346	66346					0.10537389914429696
TLPASIPH	8	Unmodified	_TLPASIPH_					0	0	0		ENSG00000113812|ENST00000335754|ACTR8	ENSG00000113812|ENST00000335754|ACTR8	ENSG00000113812|ENST00000335754|ACTR8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.28961181640625	2	418.237253	834.459953	-0.43409	-0.00018155	1.1553	0.00048318	0.72119	0.00030163	418.2377206577057	72.914	0.57514	73.3	72.999	73.575	0.38582					21	13	2	0	0	0	0.4196	1	8153	8153		35.201	5.3592	1	169730			58499	2748	39042	39058	66347	66347					0.03610130697279601
TLPEILKYV	9	Unmodified	_TLPEILKYV_					0	0	0		ENSG00000107537|ENST00000263038|PHYH;nc|ENSG00000107537|O14832-2|PHYH;ENST00000464049.1_1_10:13333753-13336616:-|nuORF	ENSG00000107537|ENST00000263038|PHYH	ENSG00000107537|ENST00000263038|PHYH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267211914062	2	538.323525	1074.6325	3.5618	0.0019174	3.4053	0.0018331	6.967	0.0037505	538.3252790877391	103.43	1.149	103.39	103.04	104.18	-0.043755					64	27	3	0	0	0	0.78058	1	11375	11375		30.504	2.6214	1	1012900			58500	2349	39043	39059	66348	66348					0.09816657313990618
TLPELVPK	8	Unmodified	_TLPELVPK_					0	0	0			REV__ENSG00000090924|ENST00000425673|PLEKHG2	REV__ENSG00000090924|ENST00000425673|PLEKHG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.7768249511719	2	448.776211	895.537869	0.0087178	3.9124E-06	2.606	0.0011695	2.6147	0.0011734	448.777265701205	49.649	1.8269	49.646	48.477	50.304	-0.0030327					55	42	2	0	0	0	0.87064	1	4154	4154		29.15	3.6994	1	195160	+		58501	16999	39044	39060	66349	66349					0.08592143562668753
TLPEVTKPPVK	11	Unmodified	_TLPEVTKPPVK_					0	0	0			REV__nc|ENSG00000165626|Q8N7W2-2|BEND7	REV__nc|ENSG00000165626|Q8N7W2-2|BEND7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3655395507812	2	604.866089	1207.71762	4.2295	0.0025583	-1.0291	-0.00062249	3.2004	0.0019358	604.8658292706077	106.17	0.3086	106.35	106.2	106.51	0.18647					24	14	2	0	0	0	0.17472	1	12975	12975		18.262	14.852	1	76448	+		58502	21197	39045	39061	66350	66350					0.12207402779790755
TLPHLSWSK	9	Unmodified	_TLPHLSWSK_					0	0	0			REV__ENST00000459779.1_1_1:53068081-53072661:+|nuORF	REV__ENST00000459779.1_1_1:53068081-53072661:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	534.79345703125	2	534.795466	1067.57638	-0.31576	-0.00016887	0.13013	6.9592E-05	-0.18563	-9.9273E-05	534.7955123159545	57.932	0.73426	57.966	57.632	58.367	0.033905					46	20	3	0	0	0	0.71772	1	5307	5307		39.253	1.4413	1	268290	+		58503	26991	39046	39062	66351	66351					0.04529449197161739
TLPHNEANSHI	11	Unmodified	_TLPHNEANSHI_					0	0	0		ENSG00000233802|ENST00000623787|TRIM49D2;ENSG00000223417|ENST00000420869|TRIM49D1	ENSG00000233802|ENST00000623787|TRIM49D2	ENSG00000233802|ENST00000623787|TRIM49D2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	616.8009643554688	2	616.804551	1231.59455	-1.1604	-0.00071573	-1.8325	-0.0011303	-2.9929	-0.001846	616.803154893142	30.645	0.6693	30.645	30.369	31.038	0					43	24	2	0	0	0	0.53361	1	1410	1410		49.536	1.8787	1	75145			58504	8697	39047	39063	66352	66352					-0.011984606187752433
TLPHNEANSHI	11	Unmodified	_TLPHNEANSHI_					0	0	0		ENSG00000233802|ENST00000623787|TRIM49D2;ENSG00000223417|ENST00000420869|TRIM49D1	ENSG00000233802|ENST00000623787|TRIM49D2	ENSG00000233802|ENST00000623787|TRIM49D2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	616.804551	1231.59455	-0.015043	-9.2785E-06	-2.9949	-0.0018473	-3.0099	-0.0018565	616.8024347708123	30.557	0.69201	30.51	30.181	30.873	-0.047064	-0.038953	-0.00032258	NaN	49.536	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76797			58505	8697	39047	39063							-0.011984606187752433
TLPHNEANSHI	11	Unmodified	_TLPHNEANSHI_					0	0	0		ENSG00000233802|ENST00000623787|TRIM49D2;ENSG00000223417|ENST00000420869|TRIM49D1	ENSG00000233802|ENST00000623787|TRIM49D2	ENSG00000233802|ENST00000623787|TRIM49D2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	616.804551	1231.59455	-0.072541	-4.4743E-05	-2.5584	-0.0015781	-2.631	-0.0016228	616.8025041946098	30.572	0.71001	30.561	30.244	30.954	-0.010656	0.011677	0.00021583	NaN	49.536	37	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67731			58506	8697	39047	39063							-0.011984606187752433
TLPHNEANSHI	11	Unmodified	_TLPHNEANSHI_					0	0	0		ENSG00000233802|ENST00000623787|TRIM49D2;ENSG00000223417|ENST00000420869|TRIM49D1	ENSG00000233802|ENST00000623787|TRIM49D2	ENSG00000233802|ENST00000623787|TRIM49D2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	616.804551	1231.59455	0.81725	0.00050408	-7.1696	-0.0044223	-6.3524	-0.0039182	616.798504634574	30.337	0.10038	30.335	30.267	30.367	-0.0022526	-0.21433	-0.0054726	NaN	49.536	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24318			58507	8697	39047	39063							-0.011984606187752433
TLPHNEANSHI	11	Unmodified	_TLPHNEANSHI_					0	0	0		ENSG00000233802|ENST00000623787|TRIM49D2;ENSG00000223417|ENST00000420869|TRIM49D1	ENSG00000233802|ENST00000623787|TRIM49D2	ENSG00000233802|ENST00000623787|TRIM49D2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	616.804551	1231.59455	0.63767	0.00039332	-3.5108	-0.0021655	-2.8731	-0.0017721	617.3044533519214	30.727	0.56425	30.73	30.579	31.144	0.0037212	0.18111	-0.00095898	NaN	49.536	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128860			58508	8697	39047	39063							-0.011984606187752433
TLPILLGGLLS	11	Unmodified	_TLPILLGGLLS_					0	0	0		ENST00000435366.2_2_20:33864837-33865065:-|nuORF	ENST00000435366.2_2_20:33864837-33865065:-|nuORF	ENST00000435366.2_2_20:33864837-33865065:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3587646484375	2	548.85245	1095.69035	0.34245	0.00018795	0.27951	0.00015341	0.62196	0.00034136	548.8530255725624	44.438	0.40458	44.487	44.336	44.74	0.048996					11	9	2	0	0	0	0.17385	1	3154	3154		13.454	0	1	48269			58509	11706	39048	39064	66353	66353					0.14632919239443254
TLPIVAAPHTT	11	Unmodified	_TLPIVAAPHTT_					0	0	0			REV__ENST00000357037.5_1_17:40556259-40556487:-|nuORF	REV__ENST00000357037.5_1_17:40556259-40556487:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3405151367188	2	560.821681	1119.62881	-1.4169	-0.00079464	-1.9487	-0.0010928	-3.3656	-0.0018875	560.8204796347721	90.342	2.276	90.518	88.956	91.232	0.17579					111	53	3	0	0	0	0.17387	1	8893	8893		30.318	7.7381	1	342020	+		58510	25401	39049	39065	66354	66354					0.07377987540121467
TLPIVAAPHTT	11	Unmodified	_TLPIVAAPHTT_					0	0	0			REV__ENST00000357037.5_1_17:40556259-40556487:-|nuORF	REV__ENST00000357037.5_1_17:40556259-40556487:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	560.821681	1119.62881	1.6757	0.00093979	-4.525	-0.0025377	-2.8492	-0.0015979	560.8191178051339	90.358	1.5181	90.809	90.451	91.969	0.45058	0.23062	-0.0011809	NaN	30.318	69	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	435390	+		58511	25401	39049	39065							0.07377987540121467
TLPIVAAPHTT	11	Unmodified	_TLPIVAAPHTT_					0	0	0			REV__ENST00000357037.5_1_17:40556259-40556487:-|nuORF	REV__ENST00000357037.5_1_17:40556259-40556487:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	560.821681	1119.62881	-1.063	-0.00059617	-1.8501	-0.0010376	-2.9131	-0.0016337	560.8205869021145	90.293	1.5428	90.764	90.485	92.028	0.47068	0.18547	0.0018194	NaN	30.318	72	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	337900	+		58512	25401	39049	39065							0.07377987540121467
TLPKGSPMRYF	11	Oxidation (M)	_TLPKGSPM(Oxidation (M))RYF_		TLPKGSPM(1)RYF		TLPKGSPM(41)RYF	0	0	1			REV__nc|ENSG00000214595|Q6ZMW3-2|EML6	REV__nc|ENSG00000214595|Q6ZMW3-2|EML6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2304382324219	3	438.228791	1311.66454	-0.96395	-0.00042243	3.9192	0.0017175	2.9552	0.0012951	438.23045548456986	28.263	0.78527	28.166	27.84	28.626	-0.096945					42	18	3	0	0	0	0.62914	1	1694	1694		41.08	7.1584	1	591240	+		58513	23657	39050	39066	66355	66355		366			0.021177017254785824
TLPLDLEIL	9	Unmodified	_TLPLDLEIL_					0	0	0		ENST00000462139.1_1_1:247460900-247461185:-|nuORF	ENST00000462139.1_1_1:247460900-247461185:-|nuORF	ENST00000462139.1_1_1:247460900-247461185:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.3092041015625	2	513.807708	1025.60086	-0.052006	-2.6721E-05	1.1706	0.00060144	1.1185	0.00057472	513.80813181887	66.806	0.42136	66.822	66.616	67.037	0.016197					32	19	2	0	0	0	0.69914	1	6260	6260		40.573	6.4001	1	91203			58514	12036	39051	39067	66356	66356					0.08908664560044599
TLPLDLEIL	9	Unmodified	_TLPLDLEIL_					0	0	0		ENST00000462139.1_1_1:247460900-247461185:-|nuORF	ENST00000462139.1_1_1:247460900-247461185:-|nuORF	ENST00000462139.1_1_1:247460900-247461185:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	513.807708	1025.60086	-0.1872	-9.6182E-05	1.4519	0.00074598	1.2647	0.0006498	513.8083500932189	66.711	0.64207	66.676	66.417	67.059	-0.035324	-0.020439	-0.00026015	NaN	40.573	42	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89173			58515	12036	39051	39067							0.08908664560044599
TLPLDLEIL	9	Unmodified	_TLPLDLEIL_					0	0	0		ENST00000462139.1_1_1:247460900-247461185:-|nuORF	ENST00000462139.1_1_1:247460900-247461185:-|nuORF	ENST00000462139.1_1_1:247460900-247461185:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	513.807708	1025.60086	-0.7496	-0.00038515	1.9367	0.00099509	1.1871	0.00060994	513.8086460827511	66.556	0.50124	66.585	66.41	66.911	0.02858	-0.11153	0.00023806	NaN	40.573	32	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95483			58516	12036	39051	39067							0.08908664560044599
TLPLDLEIL	9	Unmodified	_TLPLDLEIL_					0	0	0		ENST00000462139.1_1_1:247460900-247461185:-|nuORF	ENST00000462139.1_1_1:247460900-247461185:-|nuORF	ENST00000462139.1_1_1:247460900-247461185:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	513.807708	1025.60086	-0.81366	-0.00041807	2.3021	0.0011828	1.4885	0.00076478	513.8087011200045	66.651	0.49745	66.703	66.511	67.009	0.052368	0.0063893	0.00061357	NaN	40.573	29	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44389			58517	12036	39051	39067							0.08908664560044599
TLPQILKSN	9	Unmodified	_TLPQILKSN_					0	0	0			REV__nc|ENSG00000177409|Q8IVG5-2|SAMD9L	REV__nc|ENSG00000177409|Q8IVG5-2|SAMD9L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8006286621094	2	507.303124	1012.5917	-0.71025	-0.00036031	-0.4347	-0.00022052	-1.145	-0.00058084	507.30277273015855	45.845	0.68511	45.816	45.453	46.139	-0.029095					24	15	2	0	0	0	0.20789	1	3758	3758		25.574	23.05	1	79954	+		58518	22201	39052	39068	66357	66357					0.08590315994376851
TLPQILKSN	9	Unmodified	_TLPQILKSN_					0	0	0			REV__nc|ENSG00000177409|Q8IVG5-2|SAMD9L	REV__nc|ENSG00000177409|Q8IVG5-2|SAMD9L	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	507.303124	1012.5917	-0.70319	-0.00035673	-0.12482	-6.332E-05	-0.82801	-0.00042005	507.3029763470187	45.319	0.56892	45.782	45.513	46.082	0.46313	-0.016841	0.00020977	NaN	25.574	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181960	+		58519	22201	39052	39068							0.08590315994376851
TLPQNFHAP	9	Unmodified	_TLPQNFHAP_					0	0	0		ENSG00000135314|ENST00000257765|KHDC1;nc|ENSG00000135314|Q4VXA5|KHDC1	ENSG00000135314|ENST00000257765|KHDC1	ENSG00000135314|ENST00000257765|KHDC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.238037109375	2	512.764166	1023.51378	-0.015418	-7.9058E-06	-0.2717	-0.00013932	-0.28712	-0.00014722	512.7633863647349	81.118	0.64807	81.54	81.227	81.875	0.4215					29	15	3	0	0	0	0.20789	1	9369	9369		40.778	0	1	404660			58520	4003	39053	39069	66358	66358					0.0029630312899371347
TLPRIGLPTEI	11	Unmodified	_TLPRIGLPTEI_					0	0	0			REV__ENSG00000125962|ENST00000473968|ARMCX5	REV__ENSG00000125962|ENST00000473968|ARMCX5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9104919433594	3	403.911568	1208.71287	-0.34293	-0.00013851	-3.0849	-0.001246	-3.4279	-0.0013846	403.9102188126006	68.233	2.7499	68.781	67.193	69.943	0.54819					138	70	3	0	0	0	0.75121	1	7365	7365		21.78	0	1	253300	+		58521	18685	39054	39070	66359	66359					0.11686518637043264
TLPSDLRR	8	Unmodified	_TLPSDLRR_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2787780761719	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.82658	1	7542	7542		21.96	1.4781	1	1311100			58522	1560	39055	39071	66360	66360					0.06031992020314192
TLPVLLLLLG	10	Unmodified	_TLPVLLLLLG_					0	0	0		ENST00000082468.11_1_6:26405791-26410201:+|nuORF;nc|ENSG00000026950|O00481-2|BTN3A1;nc|ENSG00000026950|O00481-3|BTN3A1;nc|ENSG00000026950|O00481-4|BTN3A1;ENSG00000026950|ENST00000289361|BTN3A1	ENST00000082468.11_1_6:26405791-26410201:+|nuORF	ENST00000082468.11_1_6:26405791-26410201:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.36083984375	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.86201	1	2401	2401		24.203	1.1603	1	781950			58523	872	39056	39072	66361	66361					0.18194411107424457
TLPVMLIAM	9	Unmodified	_TLPVMLIAM_					0	0	0		ENSG00000105668|ENST00000222275|UPK1A	ENSG00000105668|ENST00000222275|UPK1A	ENSG00000105668|ENST00000222275|UPK1A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.78045654296875	2	494.782124	987.549696	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.972	1	86.121	85.621	86.621	0.14902								0	0	0	0.2969	1	8435	8435		31.955	2.8053	1				58524	2236	39057	39073	66362	66362					0.0554230098998687
TLPVRHGRAGG	11	Unmodified	_TLPVRHGRAGG_					0	0	0			REV__nc|ENSG00000120885|P10909-2|CLU	REV__nc|ENSG00000120885|P10909-2|CLU	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8201293945312	2	560.820338	1119.62612	1.7672	0.00099109	-2.7024	-0.0015155	-0.93514	-0.00052445	560.818662901512	92.32	2.1996	92.766	91.879	94.079	0.44661					115	51	3	0	0	0	0.73893	1	10988	10988		24.519	0.31644	1	230230	+		58525	29811	39058	39074	66363	66363					0.07109576925836336
TLQERRRMKRR	11	Unmodified	_TLQERRRMKRR_					0	0	0		ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.6334228515625	3	510.635437	1528.88448	1.9809	0.0010115	-3.3827	-0.0017273	-1.4018	-0.0007158	510.63303476762127	104.3	2.045	104.49	103.76	105.81	0.18887					109	51	3	0	0	0	0.75779	1	12622	12622		20.315	0	1	329880			58526	9360	39059	39075	66364	66364					0.14119365176406973
TLQERRRMKRR	11	Unmodified	_TLQERRRMKRR_					0	0	0		ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	510.635437	1528.88448	-0.33802	-0.00017261	-0.47887	-0.00024453	-0.81689	-0.00041713	510.63433062753256	104.36	1.5626	104.53	103.85	105.41	0.17095	0.0089232	0.0019514	NaN	20.315	149	38	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	628200			58527	9360	39059	39075							0.14119365176406973
TLQERRRMKRR	11	Unmodified	_TLQERRRMKRR_					0	0	0		ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	510.635437	1528.88448	0.81366	0.00041548	-1.5582	-0.00079565	-0.74449	-0.00038016	510.6336507571695	104.47	1.893	104.59	103.66	105.55	0.11685	0.072915	0.00029807	NaN	20.315	158	46	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	585600			58528	9360	39059	39075							0.14119365176406973
TLQERRRMKRR	11	Unmodified	_TLQERRRMKRR_					0	0	0		ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	510.635437	1528.88448	-1.5803	-0.00080697	0.58933	0.00030093	-0.991	-0.00050604	510.6349315278733	104.49	1.6457	104.58	103.87	105.52	0.093857	0.063252	0.0035878	NaN	20.315	135	40	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	478750			58529	9360	39059	39075							0.14119365176406973
TLQHDVPW	8	Unmodified	_TLQHDVPW_					0	0	0		ENSG00000143772|ENST00000429204|ITPKB	ENSG00000143772|ENST00000429204|ITPKB	ENSG00000143772|ENST00000429204|ITPKB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.2497863769531	2	498.250892	994.48723	-1.5014	-0.00074805	0.40464	0.00020161	-1.0967	-0.00054644	498.2515159511958	84.873	2.6908	85.023	83.276	85.967	0.14951					140	61	3	0	0	0	0.9159	1	8083	8083		44.531	3.7529	1	117250			58530	4660	39060	39076	66365	66365					-0.010233857623461518
TLQSDLAGPE	10	Unmodified	_TLQSDLAGPE_					0	0	0		nc|ENSG00000185988|Q496M5-2|PLK5;ENSG00000185988|ENST00000454744|PLK5	nc|ENSG00000185988|Q496M5-2|PLK5	nc|ENSG00000185988|Q496M5-2|PLK5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.8287353515625	2	515.756204	1029.49785	0.201	0.00010367	3.7773	0.0019482	3.9783	0.0020519	515.7586898353203	82.963	0.36396	83.437	83.255	83.619	0.47383					14	8	3	0	0	0	0.37624	1	9670	9670		26.693	9.9755	1	137910			58531	7766	39061	39077	66366	66366					-0.01571447898572842
TLRAKNLPQPQ	11	Unmodified	_TLRAKNLPQPQ_					0	0	0		ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000130827|ENST00000369682|PLXNA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3700561523438	2	633.369861	1264.72517	1.5936	0.0010093	-2.5684	-0.0016267	-0.97477	-0.00061739	633.3681450827713	95.612	2.2846	96.032	94.734	97.018	0.41963					200	55	4	0	0	0	0.67568	1	11380	11380		26.063	0	1	3838500			58532	3691	39062	39078	66367	66367					0.1033955510006308
TLRALRNTLQP	11	Unmodified	_TLRALRNTLQP_					0	0	0		ENSG00000198286|ENST00000396946|CARD11	ENSG00000198286|ENST00000396946|CARD11	ENSG00000198286|ENST00000396946|CARD11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8826293945312	2	641.883136	1281.75172	2.2004	0.0014124	-3.2914	-0.0021127	-1.091	-0.0007003	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.6493	1	10464	10464		38.754	7.2238	1	3624200			58533	8262	39063	39079	66368	66368					0.12211243991396259
TLRAVLFLVCS	11	Unmodified	_TLRAVLFLVCS_					0	0	0			REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF	REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3544311523438	2	611.354834	1220.69511	1.142	0.00069816	1.5785	0.00096504	2.7205	0.0016632	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.67778	1	9722	9722		35.152	3.6222	1	17478000	+		58534	20165	39064	39080	66369	66369					0.09359480110538243
TLRAVLFLVCS	11	Unmodified	_TLRAVLFLVCS_					0	0	0			REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF	REV__ENST00000533291.5_1_11:120531027-120833419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.3554077148438	2	611.354834	1220.69511	0.93149	0.00056947	1.983	0.0012123	2.9145	0.0017818	611.3560842580883	95.783	3.9941	96.187	95.298	99.293	0.40451					337	97	4	0	0	0	0.57736	1	11466	11466		46.457	4.0606	1	11629000	+		58535	20165	39064	39080	66370	66370					0.09359480110538243
TLRAWSSH	8	Unmodified	_TLRAWSSH_					0	0	0		nc|ENSG00000003137|Q9NR63-2|CYP26B1;nc|ENSG00000003137|Q9NR63-3|CYP26B1;ENSG00000003137|ENST00000001146|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.6641540527344	2	479.248683	956.482814	0.53184	0.00025488	-1.8239	-0.0008741	-1.292	-0.00061921	479.2479652685026	72.993	0.21217	73.123	72.954	73.166	0.13063					6	5	2	0	0	0	0.4196	1	6719	6719		17.365	0	1	22029			58536	656	39065	39081	66371	66371					0.0028314981475432432
TLREFILKAF	10	Unmodified	_TLREFILKAF_					0	0	0		nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;chr2:166304122-166305792|14|13.79|0.19|6.22|-|ENST00000645907|SCN9A,SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A	nc|ENSG00000169432|Q15858-4|SCN9A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.3713989257812	2	619.368798	1236.72304	2.9405	0.0018212	2.8596	0.0017711	5.8001	0.0035924	619.3710459342678	101.7	2.0362	101.65	101.12	103.16	-0.049828					124	48	5	0	0	0	0.86698	1	11079	11079		28.081	1.0342	1	3045300			58537	313	39066	39082	66372	66372					0.11415126362271621
TLREMAPP	8	Unmodified	_TLREMAPP_					0	0	0			REV__ENST00000462546.5_1_7:23719819-23732088:+|nuORF	REV__ENST00000462546.5_1_7:23719819-23732088:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2631530761719	2	457.741845	913.469137	0.64956	0.00029733	3.2434	0.0014847	3.893	0.001782	457.74354239069595	83.449	3.7021	83.38	82.016	85.718	-0.068596					128	85	2	0	0	0	0.4196	1	8708	8708		45.952	14.422	1	115380	+		58538	27057	39067	39083	66373	66373					0.0089415599129552
TLRFHGVL	8	Unmodified	_TLRFHGVL_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	471.7785339355469	2	471.779619	941.544686	-0.10976	-5.1782E-05	-1.3602	-0.00064171	-1.47	-0.0006935	471.7788250865109	82.739	0.81616	82.805	82.396	83.212	0.065918					39	18	3	0	0	0	0.83456	1	8191	8191		60.972	6.1956	1	340970			58539	5149	39068	39084	66374	66374					0.07157501233893981
TLRGGRLR	8	Unmodified	_TLRGGRLR_					0	0	0		ENST00000473798.1_1_1:762082-762571:-|nuORF	ENST00000473798.1_1_1:762082-762571:-|nuORF	ENST00000473798.1_1_1:762082-762571:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7903137207031	2	464.793592	927.572632	-1.8726	-0.00087039	-4.4289	-0.0020585	-6.3015	-0.0029289	464.79142205700754	36.889	1.6787	36.889	35.761	37.439	0					76	39	3	0	0	0	0.81897	1	2178	2178		20.947	1.587	1	196040			58540	12292	39069	39085	66375	66375					0.1059482421399025
TLRIILDE	8	Unmodified	_TLRIILDE_					0	0	0		ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.7907409667969	2	486.78985	971.565146	0.96426	0.00046939	-1.1101	-0.00054036	-0.14579	-7.0969E-05	486.7891263906007	33.666	0.91739	33.971	33.448	34.366	0.30494					43	21	3	0	0	0	0.9283	1	2452	2452		49.442	8.6634	1	656080			58541	1166	39070	39086	66376	66376					0.078226271030303
TLRIRRLGEP	10	Unmodified	_TLRIRRLGEP_					0	0	0		nc|ENSG00000285467|P0CG22|DHRS4L1;nc|ENSG00000157326|Q9BTZ2-6|DHRS4;ENST00000559270.5_2_14:24507775-24520174:+|nuORF;nc|ENSG00000157326|Q9BTZ2-3|DHRS4;nc|ENSG00000157326|Q9BTZ2-2|DHRS4;nc|ENSG00000157326|Q9BTZ2-5|DHRS4;nc|ENSG00000157326|Q9BTZ2-8|DHRS4;nc|ENSG00000157326|Q9BTZ2-4|DHRS4;ENSG00000157326|ENST00000313250|DHRS4	nc|ENSG00000285467|P0CG22|DHRS4L1	nc|ENSG00000285467|P0CG22|DHRS4L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.87255859375	2	605.872571	1209.73059	2.969	0.0017988	-3.6283	-0.0021983	-0.65929	-0.00039945	605.8701685265158	100.36	1.5776	100.31	99.825	101.4	-0.052109					123	36	5	0	0	0	0.82886	1	10865	10865		37.812	4.9991	1	1633200			58542	15330	39071	39087	66377	66377					0.13411278682542616
TLRKKDLTT	9	Unmodified	_TLRKKDLTT_					0	0	0			REV__ENSG00000214814|ENST00000522917|FER1L6	REV__ENSG00000214814|ENST00000522917|FER1L6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267822265625	2	538.327131	1074.63971	3.4335	0.0018483	-3.8831	-0.0020904	-0.44957	-0.00024201	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.6204	1	11097	11097		45.972	0	1	75550000	+		58543	23665	39072	39088	66378	66378					0.10537389914406958
TLRKKDLTT	9	Unmodified	_TLRKKDLTT_					0	0	0			REV__ENSG00000214814|ENST00000522917|FER1L6	REV__ENSG00000214814|ENST00000522917|FER1L6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3265991210938	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.77244	1	12463	12463		32.812	0	1	4041000	+		58544	23665	39072	39088	66379	66379					0.10537389914406958
TLRKLFLAAM	10	Unmodified	_TLRKLFLAAM_					0	0	0			REV__ENSG00000122033|ENST00000381120|MTIF3	REV__ENSG00000122033|ENST00000381120|MTIF3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3550415039062	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.03	1	118.01	117.51	118.51	-0.024208								0	0	0	0.45132	1	13070	13070		25.574	2.0514	1		+		58545	18478	39073	39089	66380	66380					0.1147980131870554
TLRKLFLAAM	10	Unmodified	_TLRKLFLAAM_					0	0	0			REV__ENSG00000122033|ENST00000381120|MTIF3	REV__ENSG00000122033|ENST00000381120|MTIF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3549194335938	2	582.352094	1162.68964	-1.3468	-0.00078429	3.7106	0.0021609	2.3638	0.0013766	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.86218	1	10809	10809		32.812	6.1195	1	120000000	+		58546	18478	39073	39089	66381	66381					0.1147980131870554
TLRKRKSY	8	Unmodified	_TLRKRKSY_					0	0	0			REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	REV__nc|ENSG00000258436|Q7Z5J4-3|RAI1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2743530273438	2	526.322183	1050.62981	0.79708	0.00041952	4.0672	0.0021406	4.8642	0.0025602	526.3241699265282	55.693	1.4557	56.094	54.943	56.398	0.40101					58	34	2	0	0	0	0.4196	1	5694	5694		47.916	12.297	1	216450	+		58547	17719	39074	39090	66382	66382					0.10652246699692114
TLRKRSSKIY	10	Unmodified	_TLRKRSSKIY_					0	0	0		ENSG00000135914|ENST00000258400|HTR2B	ENSG00000135914|ENST00000258400|HTR2B	ENSG00000135914|ENST00000258400|HTR2B	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3809814453125	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.46	1	116.38	115.88	116.88	-0.080467								0	0	0	0.45132	1	12510	12510		32.812	6.749	1				58548	4065	39075	39091	66383	66383					0.13056145479754377
TLRLGAKEN	9	Unmodified	_TLRLGAKEN_					0	0	0		ENST00000493139.1_1_1:89524782-89524920:-|nuORF	ENST00000493139.1_1_1:89524782-89524920:-|nuORF	ENST00000493139.1_1_1:89524782-89524920:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.290283203125	2	501.290548	1000.56654	-1.4828	-0.00074334	1.1379	0.00057041	-0.34496	-0.00017293	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.78124	1	8134	8134		30.318	3.2704	1	2793500			58549	12718	39076	39092	66384	66384					0.06628261191792717
TLRLVPRLMT	10	Unmodified	_TLRLVPRLMT_					0	0	0			REV__ENST00000595897.5_1_19:42407837-42410617:+|nuORF	REV__ENST00000595897.5_1_19:42407837-42410617:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.5804748535156	3	400.581276	1198.722	-0.18597	-7.4498E-05	-1.7427	-0.00069808	-1.9286	-0.00077258	400.580438395315	117.64	0.26853	117.56	117.36	117.63	-0.075302					15	8	2	0	0	0	0.86551	1	12605	12605		14.694	0.60766	1	111820	+		58550	16732	39077	39093	66385	66385					0.1305858872169665
TLRLWLQP	8	Unmodified	_TLRLWLQP_					0	0	0			REV__ENST00000432729.5_1_3:178745252-178745533:-|nuORF	REV__ENST00000432729.5_1_3:178745252-178745533:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.7549438476562	2	513.808377	1025.6022	0.63007	0.00032373	0.31326	0.00016095	0.94333	0.00048469	513.8083514844631	54.975	1.7519	55.382	54.573	56.325	0.40663					52	41	2	0	0	0	0.4196	1	5652	5652		12.207	3.9756	1	95790	+		58551	26636	39078	39094	66386	66386					0.09042343439477918
TLRMVLAI	8	Unmodified	_TLRMVLAI_					0	0	0		ENST00000368007.8_1_1:161087910-161088000:+|nuORF;ENST00000479266.5_1_1:161087910-161088985:+|nuORF;ENST00000496768.5_1_1:161087910-161088985:+|nuORF;ENST00000368009.6_1_1:161087910-161088985:+|nuORF	ENST00000368007.8_1_1:161087910-161088000:+|nuORF	ENST00000368007.8_1_1:161087910-161088000:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	458.7878723144531	2	458.786056	915.557558	-0.12843	-5.8921E-05	3.1011	0.0014228	2.9727	0.0013638	458.7874632709064	93.167	2.7299	93.237	92.412	95.142	0.069862					206	64	5	0	0	0	0.87922	1	9762	9762		31.955	2.8053	1	16426000			58552	10576	39079	39095	66387	66387					0.09640196301768356
TLRNIFWKH	9	Unmodified	_TLRNIFWKH_					0	0	0		ENST00000452825.7_2_X:53221315-53221459:-|nuORF	ENST00000452825.7_2_X:53221315-53221459:-|nuORF	ENST00000452825.7_2_X:53221315-53221459:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.5649108886719	3	405.564614	1213.67201	-1.0529	-0.00042701	1.4681	0.00059539	0.41517	0.00016838	405.5651485487608	63.261	1.4207	63.284	62.805	64.225	0.022984					129	62	3	0	0	0	0.7932	1	5575	5575		20.03	0	1	264990			58553	11927	39080	39096	66388	66388					0.07372222108074311
TLRNLPKSLQV	11	Unmodified	_TLRNLPKSLQV_					0	0	0		nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9;ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9	nc|ENSG00000239732|Q9NR96-2|TLR9	nc|ENSG00000239732|Q9NR96-2|TLR9	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.892578125	2	634.887887	1267.76122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.49	1	105.68	105.18	106.18	0.18647								0	0	0	0.56276	1	12901	12901		41.427	3.6151	1				58554	8772	39081	39097	66389	66389					0.1380501227693003
TLRNTIKSL	9	Unmodified	_TLRNTIKSL_					0	0	0			REV__nc|ENSG00000156983|P55201-4|BRPF1	REV__nc|ENSG00000156983|P55201-4|BRPF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3036499023438	2	523.321848	1044.62914	1.6447	0.00086072	1.749	0.00091528	3.3937	0.001776	523.3232348765359	88.762	0.63634	88.69	88.2	88.837	-0.07238					21	15	2	0	0	0	0.20789	1	9232	9232		24.519	0	1	40584	+		58555	20520	39082	39098	66390	66390					0.10861407259994849
TLRPLAGFV	9	Unmodified	_TLRPLAGFV_					0	0	0			REV__ENSG00000178732|ENST00000692618|GP5	REV__ENSG00000178732|ENST00000692618|GP5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.2928771972656	2	487.295102	972.575651	-0.95486	-0.0004653	-3.015	-0.0014692	-3.9698	-0.0019345	487.2935206291715	91.355	2.0771	91.355	90.861	92.938	0					114	48	4	0	0	0	0.76255	1	8942	8942		35.618	3.6634	1	1437600	+		58556	22292	39083	39099	66391	66391					0.08826654548136048
TLRPLAGFV	9	Unmodified	_TLRPLAGFV_					0	0	0			REV__ENSG00000178732|ENST00000692618|GP5	REV__ENSG00000178732|ENST00000692618|GP5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.29278564453125	2	487.295102	972.575651	-0.085832	-4.1825E-05	-3.823	-0.0018629	-3.9088	-0.0019048	487.29311557745604	91.223	2.7335	91.293	90.723	93.457	0.069328					138	65	3	0	0	0	0.76255	1	9371	9371		35.618	2.8059	1	2116800	+		58557	22292	39083	39099	66392	66392					0.08826654548136048
TLRPLAGFV	9	Unmodified	_TLRPLAGFV_					0	0	0			REV__ENSG00000178732|ENST00000692618|GP5	REV__ENSG00000178732|ENST00000692618|GP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.2929382324219	2	487.295102	972.575651	-1.6564	-0.00080713	-2.3009	-0.0011212	-3.9572	-0.0019283	487.29386636791077	90.875	2.2933	91.055	90.557	92.85	0.18029					120	54	3	0	0	0	0.78058	1	9089	9089		30.504	1.3541	1	1353600	+		58558	22292	39083	39099	66393	66393					0.08826654548136048
TLRPLKVRRRR	11	Unmodified	_TLRPLKVRRRR_					0	0	0		nc|ENSG00000140090|Q8NFF2-3|SLC24A4;ENSG00000140090|ENST00000532405|SLC24A4	nc|ENSG00000140090|Q8NFF2-3|SLC24A4	nc|ENSG00000140090|Q8NFF2-3|SLC24A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.3243408203125	3	484.323299	1449.94807	0.066125	3.2026E-05	1.5368	0.00074429	1.6029	0.00077632	484.3241118198103	15.478	0.14655	15.536	15.437	15.583	0.057872					12	4	3	0	0	0	0.85439	1	33	33		5.6988	2.847	1	194380			58559	4414	39084	39100	66394	66394					0.2410909367581553
TLRPLKVRRRR	11	Unmodified	_TLRPLKVRRRR_					0	0	0		nc|ENSG00000140090|Q8NFF2-3|SLC24A4;ENSG00000140090|ENST00000532405|SLC24A4	nc|ENSG00000140090|Q8NFF2-3|SLC24A4	nc|ENSG00000140090|Q8NFF2-3|SLC24A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.65850830078125	3	484.323299	1449.94807	0.71931	0.00034838	0.82846	0.00040124	1.5478	0.00074962	484.65806386232003	15.394	0.18064	15.369	15.269	15.45	-0.024207					9	5	2	0	0	0	0.81219	1	29	29		8.7993	3.6569	1	167820			58560	4414	39084	39100	66395	66395					0.2410909367581553
TLRPWTCN	8	Unmodified	_TLRPWTCN_					0	0	0		ENST00000456943.6_1_6:2272473-2272845:+|nuORF	ENST00000456943.6_1_6:2272473-2272845:+|nuORF	ENST00000456943.6_1_6:2272473-2272845:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.74383544921875	2	495.744919	989.475285	-0.19473	-9.6537E-05	-1.1074	-0.00054899	-1.3021	-0.00064552	495.74414577371067	73.649	0.69046	74.208	73.984	74.674	0.55891					34	17	3	0	0	0	0.89962	1	8320	8320		38.806	1.647	1	571520			58561	11974	39085	39101	66396	66396					-0.019873257771905628
TLRPYQRR	8	Unmodified	_TLRPYQRR_					0	0	0			REV__ENST00000336314.8_2_5:154195475-154195619:+|nuORF	REV__ENST00000336314.8_2_5:154195475-154195619:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3165283203125	2	545.317432	1088.62031	0.15103	8.2357E-05	-1.6523	-0.00090103	-1.5013	-0.00081867	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.87792	1	8915	8915		31.53	2.3803	1	5755000	+		58562	25188	39086	39102	66397	66397					0.07954478414171717
TLRQAGAPN	9	Unmodified	_TLRQAGAPN_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-6|KLF4;nc|ENSG00000136826|O43474-5|KLF4	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.25390625	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.71772	1	8503	8503		39.253	0	1	1673200			58563	14941	39087	39103	66398	66398					0.027191324691784757
TLRQAGAPN	9	Unmodified	_TLRQAGAPN_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-6|KLF4;nc|ENSG00000136826|O43474-5|KLF4	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25628662109375	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.73802	1	8376	8376		37.812	2.6108	1	1482000			58564	14941	39087	39103	66399	66399					0.027191324691784757
TLRQAGAPN	9	Unmodified	_TLRQAGAPN_					0	0	0		nc|ENSG00000136826|O43474|KLF4;ENSG00000136826|ENST00000374672|KLF4;nc|ENSG00000136826|O43474-6|KLF4;nc|ENSG00000136826|O43474-5|KLF4	nc|ENSG00000136826|O43474|KLF4	nc|ENSG00000136826|O43474|KLF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.25360107421875	2	464.253966	926.493378	-0.27289	-0.00012669	0.55154	0.00025606	0.27865	0.00012936	464.25414553002815	83.787	4.325	84.243	82.613	86.938	0.45555					259	105	3	0	0	0	0.76419	1	9721	9721		35.152	3.1972	1	1215000			58565	14941	39087	39103	66400	66400					0.027191324691784757
TLRQRALFLHV	11	Unmodified	_TLRQRALFLHV_					0	0	0			REV__ENST00000419510.6_1_3:187454417-187454675:-|nuORF	REV__ENST00000419510.6_1_3:187454417-187454675:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.94317626953125	3	451.941973	1352.80409	0.2172	9.8162E-05	2.4446	0.0011048	2.6618	0.001203	451.9429320683671	53.536	2.9052	53.559	51.408	54.313	0.022537					241	75	5	0	0	0	0.77803	1	4687	4687		15.921	0	1	771970	+		58566	26476	39088	39104	66401	66401					0.1417982712500816
TLRQRALFLHV	11	Unmodified	_TLRQRALFLHV_					0	0	0			REV__ENST00000419510.6_1_3:187454417-187454675:-|nuORF	REV__ENST00000419510.6_1_3:187454417-187454675:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.94317626953125	3	451.941973	1352.80409	-0.53385	-0.00024127	3.0718	0.0013883	2.538	0.001147	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.74771	1	4333	4333		22.562	6.6409	1	920720	+		58567	26476	39088	39104	66402	66402					0.1417982712500816
TLRQRKRAQP	10	Unmodified	_TLRQRKRAQP_					0	0	0			REV__ENSG00000100219|ENST00000344347|XBP1	REV__ENSG00000100219|ENST00000344347|XBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3857421875	2	627.381094	1252.74764	6.5831	0.0041301	-4.1836	-0.0026247	2.3995	0.0015054	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.85251	1	13812	13812		19.997	0.89325	1	94412	+		58568	17154	39089	39105	66403	66403					0.13137199288371448
TLRRLPAM	8	Unmodified	_TLRRLPAM_					0	0	0			REV__ENST00000276420.8_1_8:21769926-21771143:-|nuORF	REV__ENST00000276420.8_1_8:21769926-21771143:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27740478515625	2	479.286754	956.558955	0.8041	0.00038539	2.1877	0.0010485	2.9918	0.0014339	479.28766631260174	84.679	0.21741	84.607	84.498	84.715	-0.07196					6	4	2	0	0	0	0.4196	1	8674	8674		21.96	8.1846	1	58293	+		58569	24579	39090	39106	66404	66404					0.07893830390526091
TLRRMAPSSPQ	11	Unmodified	_TLRRMAPSSPQ_					0	0	0			REV__nc|ENSG00000105146|Q9UQB9-3|AURKC	REV__nc|ENSG00000105146|Q9UQB9-3|AURKC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3363647460938	2	622.332421	1242.65029	2.9643	0.0018448	3.4175	0.0021268	6.3818	0.0039716	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.74763	1	12309	12309		22.58	3.4761	1	435720	+		58570	17510	39091	39107	66405	66405					0.0386704929719599
TLRTAQPII	9	Unmodified	_TLRTAQPII_					0	0	0		nc|ENSG00000198520|Q6PIY5-2|ARMH1;ENST00000357508.5_1_1:45155363-45190065:+|nuORF;ENSG00000198520|ENST00000535358|ARMH1	nc|ENSG00000198520|Q6PIY5-2|ARMH1	nc|ENSG00000198520|Q6PIY5-2|ARMH1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8116455078125	2	506.811116	1011.60768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.811	1	61.93	61.43	62.43	0.11901								0	0	0	0.30778	1	5380	5380		27.882	0	1				58571	8281	39092	39108	66406	66406					0.10234022231293238
TLRTKQHKLN	10	Unmodified	_TLRTKQHKLN_					0	0	0			REV__ENST00000448264.1_1_1:225888537-225888804:+|nuORF	REV__ENST00000448264.1_1_1:225888537-225888804:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.86962890625	2	619.870028	1237.7255	-0.18236	-0.00011304	-0.59862	-0.00037106	-0.78097	-0.0004841	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.86348	1	9629	9629		31.53	0	1	2627900	+		58572	26836	39093	39109	66407	66407					0.11614974819940471
TLRTQARPGE	10	Unmodified	_TLRTQARPGE_					0	0	0		ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	564.8106079101562	2	564.809636	1127.60472	1.4564	0.00082257	-0.037051	-2.0927E-05	1.4193	0.00080164	564.8095113497515	109.89	1.6808	109.93	109.61	111.29	0.033096					159	64	3	0	0	0	0.86106	1	12039	12039		33.922	2.2874	1	3333200			58573	1946	39094	39110	66408	66408					0.04602147106470511
TLRTRKVPPTT	11	Unmodified	_TLRTRKVPPTT_					0	0	0		ENST00000397954.6_1_15:25620647-25620860:-|nuORF	ENST00000397954.6_1_15:25620647-25620860:-|nuORF	ENST00000397954.6_1_15:25620647-25620860:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	635.3886108398438	2	635.385511	1268.75647	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.38	1	107.42	106.92	107.92	0.035622								0	0	0	0.56276	1	11789	11789		40.058	4.9061	1				58574	11167	39095	39111	66409	66409					0.13284128134182538
TLRVKDGEK	9	Unmodified	_TLRVKDGEK_					0	0	0			REV__ENSG00000163568|ENST00000368130|AIM2	REV__ENSG00000163568|ENST00000368130|AIM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3035278320312	2	523.303655	1044.59276	1.2403	0.00064907	-1.1926	-0.00062409	0.047741	2.4983E-05	523.302929168532	91.415	2.5669	91.46	91.141	93.708	0.045448					111	60	2	0	0	0	0.77659	1	9499	9499		31.634	3.752	1	1018700	+		58575	20937	39096	39112	66410	66410					0.07224530363282611
TLRVRRSYN	9	Unmodified	_TLRVRRSYN_					0	0	0		ENSG00000120008|ENST00000263461|WDR11	ENSG00000120008|ENST00000263461|WDR11	ENSG00000120008|ENST00000263461|WDR11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.834716796875	2	582.833446	1163.65234	0.11318	6.5963E-05	-1.4518	-0.00084619	-1.3387	-0.00078022	582.8325626554922	94.252	3.4585	94.298	93.323	96.781	0.046173					208	81	3	0	0	0	0.73802	1	9937	9937		37.812	0.65241	1	743970			58576	3108	39097	39113	66411	66411					0.07705846097337599
TLRWKVLPGIL	11	Unmodified	_TLRWKVLPGIL_					0	0	0		ENSG00000104998|ENST00000263379|IL27RA	ENSG00000104998|ENST00000263379|IL27RA	ENSG00000104998|ENST00000263379|IL27RA	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3919067382812	2	648.41354	1294.81253	0.024153	1.5661E-05	1.7623	0.0011427	1.7864	0.0011583	648.9170787563897	106.63	0.49163	106.63	106.35	106.84	0					13	10	2	0	0	0	0.1728	1	11060	11060		18.262	0	1	146170			58577	2179	39098	39114	66412	66412					0.1769138104166359
TLSAIYSQ	8	Unmodified	_TLSAIYSQ_					0	0	0		nc|ENSG00000160360|Q86YR5-3|GPSM1;nc|ENSG00000160360|Q86YR5-4|GPSM1;nc|ENSG00000160360|Q86YR5|GPSM1;ENSG00000160360|ENST00000440944|GPSM1;ENSG00000121957|ENST00000264126|GPSM2	nc|ENSG00000160360|Q86YR5-3|GPSM1	nc|ENSG00000160360|Q86YR5-3|GPSM1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.78802490234375	2	441.732	881.449448	-1.8966	-0.00083777	2.2522	0.00099486	0.35562	0.00015709	441.73316154758146	39.004	0.2065	39.004	38.9	39.106	0					7	4	2	0	0	0	0.4196	1	2473	2473		44.117	3.5442	1	20721			58578	3203	39099	39115	66413	66413					0.003981032521892303
TLSALHLN	8	Unmodified	_TLSALHLN_					0	0	0			REV__nc|ENSG00000143127|O75578-3|ITGA10	REV__nc|ENSG00000143127|O75578-3|ITGA10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7807922363281	2	434.747985	867.481417	0.40074	0.00017422	1.7153	0.00074574	2.1161	0.00091996	434.7484372675882	35.536	0.33949	35.784	35.63	35.97	0.24769					12	8	2	0	0	0	0.4196	1	2733	2733		24.203	0	1	41859	+		58579	19772	39100	39116	66414	66414					0.04237515726003949
TLSDLRVYL	9	Unmodified	_TLSDLRVYL_					0	0	0		ENSG00000271303|ENST00000381962|SRXN1;ENST00000488788.2_1_20:629360-656142:-|nuORF	ENSG00000271303|ENST00000381962|SRXN1	ENSG00000271303|ENST00000381962|SRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.3090209960938	2	540.308406	1078.60226	0.052439	2.8333E-05	0.56447	0.00030499	0.61691	0.00033332	540.3083029892676	74.824	0.59243	74.949	74.623	75.216	0.12545					33	15	3	0	0	0	0.44421	1	6925	6925		54.776	12.38	1	129190			58580	8977	39101	39117	66415	66415					0.06610298648797652
TLSDLRVYL	9	Unmodified	_TLSDLRVYL_					0	0	0		ENSG00000271303|ENST00000381962|SRXN1;ENST00000488788.2_1_20:629360-656142:-|nuORF	ENSG00000271303|ENST00000381962|SRXN1	ENSG00000271303|ENST00000381962|SRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.308837890625	2	540.308406	1078.60226	0.60744	0.0003282	-0.15342	-8.2892E-05	0.45402	0.00024531	540.3081320054551	74.738	0.71099	74.87	74.537	75.248	0.13208					42	20	3	0	0	0	0.36616	1	6925	6925		60.118	3.3972	1	124190			58581	8977	39101	39117	66416	66416					0.06610298648797652
TLSDLRVYL	9	Unmodified	_TLSDLRVYL_					0	0	0		ENSG00000271303|ENST00000381962|SRXN1;ENST00000488788.2_1_20:629360-656142:-|nuORF	ENSG00000271303|ENST00000381962|SRXN1	ENSG00000271303|ENST00000381962|SRXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.3085327148438	2	540.308406	1078.60226	-1.0194	-0.00055081	1.0945	0.00059138	0.075088	4.0571E-05	540.3090667593755	74.837	0.75409	74.923	74.628	75.382	0.085907					34	20	3	0	0	0	0.41566	1	6910	6910		56.721	3.7844	1	106930			58582	8977	39101	39117	66417	66417					0.06610298648797652
TLSEDVDQKK	10	Unmodified	_TLSEDVDQKK_					0	0	0			REV__nc|ENSG00000132554|Q8NE09-2|RGS22	REV__nc|ENSG00000132554|Q8NE09-2|RGS22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.8029174804688	2	581.801143	1161.58773	0.55662	0.00032384	4.184	0.0024342	4.7406	0.0027581	581.8034623871067	64.587	0.91196	64.711	64.307	65.219	0.12396					103	32	4	0	0	0	0.73395	1	5675	5675		42.864	1.4377	1	1348900	+		58583	19012	39102	39118	66418	66418					0.013401817099975233
TLSFQTLRTTV	11	Unmodified	_TLSFQTLRTTV_					0	0	0		ENSG00000115590|ENST00000332549|IL1R2;ENST00000485335.1_1_2:102640001-102644851:+|nuORF;ENST00000474085.5_1_2:102638602-102644851:+|nuORF	ENSG00000115590|ENST00000332549|IL1R2	ENSG00000115590|ENST00000332549|IL1R2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.8589477539062	2	633.856252	1265.69795	0.083224	5.2752E-05	2.7963	0.0017725	2.8796	0.0018252	633.8578521002322	69.798	0.569	70.183	69.937	70.506	0.38416					23	16	2	0	0	0	0.66009	1	7729	7729		37.508	3.5865	1	501080			58584	2857	39103	39119	66419	66419					0.0757302676904601
TLSFQTLRTTV	11	Unmodified	_TLSFQTLRTTV_					0	0	0		ENSG00000115590|ENST00000332549|IL1R2;ENST00000485335.1_1_2:102640001-102644851:+|nuORF;ENST00000474085.5_1_2:102638602-102644851:+|nuORF	ENSG00000115590|ENST00000332549|IL1R2	ENSG00000115590|ENST00000332549|IL1R2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	633.856252	1265.69795	0.86755	0.0005499	2.0754	0.0013155	2.9429	0.0018654	633.8574770444776	69.634	0.49962	70.181	70.04	70.539	0.54694	-0.00083096	-0.00044168	NaN	37.508	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	461360			58585	2857	39103	39119							0.0757302676904601
TLSFVIGLG	9	Unmodified	_TLSFVIGLG_					0	0	0			REV__ENST00000481464.5_1_1:19927449-19952892:+|nuORF	REV__ENST00000481464.5_1_1:19927449-19952892:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.765625	2	453.768386	905.522219	-1.8474	-0.00083831	-4.0327	-0.0018299	-5.8802	-0.0026682	453.76663563247314	42.146	1.7379	42.146	41.766	43.504	0					90	42	4	0	0	0	0.72402	1	2913	2913		38.806	0	1	323540	+		58586	21923	39104	39120	66420	66420					0.0656785704561571
TLSFVIGLG	9	Unmodified	_TLSFVIGLG_					0	0	0			REV__ENST00000481464.5_1_1:19927449-19952892:+|nuORF	REV__ENST00000481464.5_1_1:19927449-19952892:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.76629638671875	2	453.768386	905.522219	-1.5185	-0.00068905	-3.2881	-0.001492	-4.8066	-0.0021811	453.766963530374	71.765	0.95408	72.149	71.628	72.582	0.38449					69	22	5	0	0	0	0.31972	1	8031	8031		63.306	9.9548	1	869760	+		58587	21923	39104	39120	66421	66421					0.0656785704561571
TLSGATLHSDL	11	Unmodified	_TLSGATLHSDL_					0	0	0		ENST00000306910.8_1_19:58929280-58929493:+|nuORF	ENST00000306910.8_1_19:58929280-58929493:+|nuORF	ENST00000306910.8_1_19:58929280-58929493:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.7886962890625	2	557.790578	1113.5666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.244	1	26.205	25.705	26.705	-0.038523								0	0	0	0.56276	1	1168	1168		37.812	0.65241	1				58588	9866	39105	39121	66422	66422					0.014362164011572531
TLSHMWMPN	9	Unmodified	_TLSHMWMPN_					0	0	0			REV__ENST00000336798.11_2_1:31344819-31345005:-|nuORF	REV__ENST00000336798.11_2_1:31344819-31345005:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.8244018554688	2	558.751887	1115.48922	0.038367	2.1438E-05	-1.0225	-0.00057134	-0.98416	-0.0005499	558.7511676234118	81.902	1.0424	82.402	82.072	83.114	0.49967					54	25	3	0	0	0	0.20789	1	9493	9493		20.947	0	1	1504300	+		58589	25196	39106	39122	66423	66423					-0.06390416340400407
TLSIGLRQSA	10	Unmodified	_TLSIGLRQSA_					0	0	0			REV__ENSG00000100341|ENST00000216177|PNPLA5	REV__ENSG00000100341|ENST00000216177|PNPLA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3032836914062	2	523.303655	1044.59276	-0.83282	-0.00043582	0.63031	0.00032984	-0.2025	-0.00010597	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.86106	1	8334	8334		33.922	3.418	1	2778600	+		58590	17172	39107	39123	66424	66424					0.07224530363282611
TLSIGLRQSA	10	Unmodified	_TLSIGLRQSA_					0	0	0			REV__ENSG00000100341|ENST00000216177|PNPLA5	REV__ENSG00000100341|ENST00000216177|PNPLA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.30322265625	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.78666	1	8369	8369		40.058	8.5284	1	3566700	+		58591	17172	39107	39123	66425	66425					0.07224530363282611
TLSIGLRQSA	10	Unmodified	_TLSIGLRQSA_					0	0	0			REV__ENSG00000100341|ENST00000216177|PNPLA5	REV__ENSG00000100341|ENST00000216177|PNPLA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3037719726562	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.86698	1	9079	9079		28.081	1.0342	1	12189000	+		58592	17172	39107	39123	66426	66426					0.07224530363282611
TLSIGLRQSA	10	Unmodified	_TLSIGLRQSA_					0	0	0			REV__ENSG00000100341|ENST00000216177|PNPLA5	REV__ENSG00000100341|ENST00000216177|PNPLA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3033447265625	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.66675	2	10771	10701;10771		46.457	2.34	1	13160000	+		58593	17172	39107	39123	66427;66428	66428					0.07224530363282611
TLSIKMLII	9	Unmodified	_TLSIKMLII_					0	0	0			REV__ENST00000380122.9_2_X:16860088-16860244:+|nuORF	REV__ENST00000380122.9_2_X:16860088-16860244:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3142700195312	2	516.330296	1030.64604	2.8723	0.0014831	1.3483	0.00069618	4.2206	0.0021792	516.3320026304141	100.24	0.53289	100.19	100	100.53	-0.052109					14	11	2	0	0	0	0.20789	1	10888	10888		23.042	0	1	37675	+		58594	25939	39108	39124	66429	66429					0.1319419182159436
TLSILGIIMA	10	Unmodified	_TLSILGIIMA_					0	0	0		ENST00000531346.1_1_11:120196007-120201221:+|nuORF;ENSG00000181264|ENST00000375095|TLCD5;nc|ENSG00000181264|Q6ZRR5-3|TLCD5	ENST00000531346.1_1_11:120196007-120201221:+|nuORF	ENST00000531346.1_1_11:120196007-120201221:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3136596679688	2	516.312103	1030.60965	0.80556	0.00041592	2.4849	0.001283	3.2904	0.0016989	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.84112	1	10603	10603		37.159	5.2042	1	72906000			58595	7380	39109	39125	66430	66430					0.09557314924882121
TLSKKERRKK	10	Unmodified	_TLSKKERRKK_					0	0	0			REV__ENST00000264645.11_1_17:38318069-38318135:+|nuORF	REV__ENST00000264645.11_1_17:38318069-38318135:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	637.4149780273438	2	637.406778	1272.799	-1.1935	-0.00076072	3.1749	0.0020237	1.9815	0.001263	637.4085327960688	15.297	0.16586	15.297	15.214	15.38	0					12	7	2	0	0	0	0.85251	1	18	18		19.997	0.89325	1	40192	+		58596	24473	39110	39126	66431	66431					0.1735152326239131
TLSKSQKKRGL	11	Unmodified	_TLSKSQKKRGL_					0	0	0		ENST00000368874.8_2_1:151264284-151264482:-|nuORF	ENST00000368874.8_2_1:151264284-151264482:-|nuORF	ENST00000368874.8_2_1:151264284-151264482:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	623.3877563476562	2	623.385511	1244.75647	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.04	1	119.13	118.63	119.63	0.087753								0	0	0	0.56276	1	12532	12532		8.6937	0	1				58597	10604	39111	39127	66432	66432					0.14388128134169165
TLSKTLPDI	9	Unmodified	_TLSKTLPDI_					0	0	0			REV__ENST00000447750.6_1_X:153671038-153671296:+|nuORF	REV__ENST00000447750.6_1_X:153671038-153671296:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7684326171875	2	494.289682	986.564812	0.015835	7.8272E-06	-0.63517	-0.00031396	-0.61934	-0.00030613	494.28920633762186	63.56	0.59061	64.115	63.84	64.43	0.55449					18	13	3	0	0	0	0.20789	1	6905	6905		27.882	5.9224	1	92703	+		58598	26826	39112	39128	66433	66433					0.07099207383191697
TLSLALLVP	9	Unmodified	_TLSLALLVP_					0	0	0		nc|ENSG00000130720|Q8N539-2|FIBCD1	nc|ENSG00000130720|Q8N539-2|FIBCD1	nc|ENSG00000130720|Q8N539-2|FIBCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8011779785156	2	463.799686	925.584819	-0.22039	-0.00010222	2.8768	0.0013343	2.6564	0.0012321	463.80077563915114	45.485	0.74849	45.417	45.021	45.77	-0.068634					44	18	3	0	0	0	0.76996	1	3298	3298		33.516	0	1	207040			58599	14907	39113	39129	66434	66434					0.11905003113815837
TLSLKLVHVA	10	Unmodified	_TLSLKLVHVA_					0	0	0		ENST00000475843.5_1_2:220462835-220466521:+|nuORF;ENST00000475396.5_1_2:220462865-220474366:+|nuORF;ENSG00000144589|ENST00000456909|STK11IP	ENST00000475843.5_1_2:220462835-220466521:+|nuORF	ENST00000475843.5_1_2:220462835-220466521:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.839111328125	2	540.842416	1079.67028	-1.0203	-0.00055183	0.13653	7.3843E-05	-0.88379	-0.00047799	540.8429285377589	74.937	0.39838	75.025	74.829	75.228	0.087631					12	9	2	0	0	0	0.86718	1	6928	6928		27.882	2.3082	1	79766			58600	4719	39114	39130	66435	66435					0.13363168299474637
TLSLLLGPL	9	Unmodified	_TLSLLLGPL_					0	0	0		ENSG00000185215|ENST00000560869|TNFAIP2	ENSG00000185215|ENST00000560869|TNFAIP2	ENSG00000185215|ENST00000560869|TNFAIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.79986572265625	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.7932	1	3769	3769		19.36	0	1	5050800			58601	7688	39115	39131	66436	66436					0.11905003113804469
TLSLLRRARMH	11	Unmodified	_TLSLLRRARMH_					0	0	0		ENST00000503473.5_1_5:176730316-176737711:-|nuORF;nc|ENSG00000213347|Q9BW11-3|MXD3;ENST00000503782.1_1_5:176734591-176737711:-|nuORF;nc|ENSG00000213347|Q9BW11-2|MXD3;ENSG00000213347|ENST00000439742|MXD3;nc|ENSG00000213347|Q9BW11-4|MXD3	ENST00000503473.5_1_5:176730316-176737711:-|nuORF	ENST00000503473.5_1_5:176730316-176737711:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.93218994140625	3	451.934712	1352.78231	-1.2099	-0.00054677	-3.2719	-0.0014787	-4.4818	-0.0020255	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.77205	1	10594	10594		17.167	3.0807	1	1176100			58602	8586	39116	39132	66437	66437					0.1200269910480074
TLSLRPIRPI	10	Unmodified	_TLSLRPIRPI_					0	0	0			REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.376708984375	2	583.374415	1164.73428	-0.64745	-0.00037771	4.2612	0.0024859	3.6137	0.0021082	583.3767422613904	43.246	1.3886	43.21	42.756	44.144	-0.035816					107	32	4	0	0	0	0.8608	1	3376	3376		34.173	6.2903	1	3509500	+		58603	19119	39117	39133	66438	66438					0.15849948456411767
TLSLRPIRPI	10	Unmodified	_TLSLRPIRPI_					0	0	0			REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.3729858398438	2	583.374415	1164.73428	-1.7422	-0.0010164	4.0544	0.0023653	2.3122	0.0013489	583.3766458505703	43.605	2.2277	44.055	43.187	45.415	0.45024					135	54	4	0	0	0	0.8545	3	3908	3908;3921;3945		36.447	3.5723	1	6139000	+		58604	19119	39117	39133	66439;66440;66441	66439					0.15849948456411767
TLSLSLPLS	9	Unmodified	_TLSLSLPLS_					0	0	0		ENST00000334211.12_3_11:72433140-72433374:-|nuORF	ENST00000334211.12_3_11:72433140-72433374:-|nuORF	ENST00000334211.12_3_11:72433140-72433374:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7775573730469	2	465.778951	929.543348	-1.2002	-0.00055902	-1.7507	-0.00081543	-2.9509	-0.0013744	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.78058	1	7698	7698		30.504	0	1	683640			58605	10146	39118	39134	66442	66442					0.07575822354476713
TLSPHTAR	8	Unmodified	_TLSPHTAR_					0	0	0			REV__nc|ENSG00000213213|Q5T5S1-4|CCDC183	REV__nc|ENSG00000213213|Q5T5S1-4|CCDC183	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.3319396972656	2	441.743234	881.471915	2.6593	0.0011747	2.6323	0.0011628	5.2917	0.0023376	441.7440441239579	26.002	0.9451	25.57	25.15	26.096	-0.4311					47	21	4	0	0	0	0.4196	1	1353	1353		21.96	1.9631	1	263090	+		58606	25693	39119	39135	66443	66443					0.02643747440470179
TLSPKKQA	8	Unmodified	_TLSPKKQA_					0	0	0			REV__ENSG00000205108|ENST00000378788|FAM205A	REV__ENSG00000205108|ENST00000378788|FAM205A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2510681152344	2	436.763635	871.512717	0.50375	0.00022002	-2.8055	-0.0012254	-2.3018	-0.0010053	436.7634765806356	17.715	0.2728	17.093	16.993	17.265	-0.62141					11	7	2	0	0	0	0.4196	1	294	294		7.1934	0	1	15429	+		58607	23541	39120	39136	66444	66444					0.071820887600893
TLSQILFF	8	Unmodified	_TLSQILFF_					0	0	0			REV__ENST00000489097.5_1_1:6526697-6527309:-|nuORF	REV__ENST00000489097.5_1_1:6526697-6527309:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2870788574219	2	484.776211	967.537869	-0.48427	-0.00023476	-3.654	-0.0017714	-4.1383	-0.0020062	484.7743000242823	53.186	0.66273	53.8	53.49	54.152	0.61436					35	15	3	0	0	0	0.4196	1	5336	5336		33.516	0	1	915470	+		58608	27613	39121	39137	66445	66445					0.052801435626633975
TLSQKKKKKVF	11	Unmodified	_TLSQKKKKKVF_					0	0	0		chr2:131082657-131088963|25|16.44|0.81|4.34|-|0|FAM168B,None|1	chr2:131082657-131088963|25|16.44|0.81|4.34|-|0|FAM168B,None|1	chr2:131082657-131088963|25|16.44|0.81|4.34|-|0|FAM168B,None|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.6359558105469	3	445.622128	1333.84456	1.5487	0.00069011	-3.7189	-0.0016572	-2.1702	-0.00096709	445.62119652585073	36.56	0.24441	37	36.829	37.073	0.44043					8	5	3	0	0	0	0.17521	1	2905	2905		17.167	3.0807	1	93241			58609	307	39122	39138	66446	66446					0.19098748724786674
TLSQKKKKKVF	11	Unmodified	_TLSQKKKKKVF_					0	0	0		chr2:131082657-131088963|25|16.44|0.81|4.34|-|0|FAM168B,None|1	chr2:131082657-131088963|25|16.44|0.81|4.34|-|0|FAM168B,None|1	chr2:131082657-131088963|25|16.44|0.81|4.34|-|0|FAM168B,None|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	445.63604736328125	3	445.622128	1333.84456	0.27289	0.00012161	1.0948	0.00048786	1.3677	0.00060946	445.6230540729297	37.741	0.10991	38.263	38.21	38.32	0.52235					4	2	2	0	0	0	0.17521	1	3080	3080		28.577	6.0151	1	136950			58610	307	39122	39138	66447	66447					0.19098748724786674
TLSQKKKKKVF	11	Unmodified	_TLSQKKKKKVF_					0	0	0		chr2:131082657-131088963|25|16.44|0.81|4.34|-|0|FAM168B,None|1	chr2:131082657-131088963|25|16.44|0.81|4.34|-|0|FAM168B,None|1	chr2:131082657-131088963|25|16.44|0.81|4.34|-|0|FAM168B,None|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	445.622128	1333.84456	-1.117	-0.00049775	-1.8218	-0.00081183	-2.9388	-0.0013096	445.6215620795698	38.092	0.56768	38.042	37.894	38.462	-0.050369	-0.18867	-0.0024549	NaN	28.577	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22927			58611	307	39122	39138							0.19098748724786674
TLSRDKLRR	9	Unmodified	_TLSRDKLRR_					0	0	0			REV__ENST00000438380.1_1_9:127533958-127535075:+|nuORF	REV__ENST00000438380.1_1_9:127533958-127535075:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.8487548828125	2	572.849096	1143.68364	1.0371	0.00059409	-0.65634	-0.00037598	0.38075	0.00021811	572.8485650257212	17.146	0.38702	17.064	16.857	17.244	-0.0821					28	15	3	0	0	0	0.6204	1	215	215		45.972	0	1	130280	+		58612	26720	39123	39139	66448	66448					0.11754419131420946
TLSSCCWAAAT	11	Unmodified	_TLSSCCWAAAT_					0	0	0		ENST00000469262.1_1_22:31501195-31501246:-|nuORF	ENST00000469262.1_1_22:31501195-31501246:-|nuORF	ENST00000469262.1_1_22:31501195-31501246:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.2412109375	2	557.238809	1112.46307	0.91556	0.00051019	-1.5031	-0.00083761	-0.58758	-0.00032742	557.2380368846686	28.331	0.53119	28.307	28.019	28.55	-0.023556					18	11	3	0	0	0	0.73893	1	1361	1361		24.519	0.99649	1	42121			58613	12196	39124	39140	66449	66449					-0.08866730302543147
TLSSSVRVLV	10	Unmodified	_TLSSSVRVLV_					0	0	0		chr15:34857106-34859393|44|38.73|0.41|6.55|-|1|TE_info:L1ME1,L1ME1_dup25582,L1,LINE,donor,+,34859393,34859561|AQR,None|3	chr15:34857106-34859393|44|38.73|0.41|6.55|-|1|TE_info:L1ME1,L1ME1_dup25582,L1,LINE,donor,+,34859393,34859561|AQR,None|3	chr15:34857106-34859393|44|38.73|0.41|6.55|-|1|TE_info:L1ME1,L1ME1_dup25582,L1,LINE,donor,+,34859393,34859561|AQR,None|3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.8211059570312	2	530.821681	1059.62881	-0.034444	-1.8284E-05	-1.2984	-0.00068923	-1.3329	-0.00070751	530.8208487478996	82.524	1.2472	82.59	82.132	83.379	0.065918					77	28	4	0	0	0	0.86471	1	8165	8165		30.318	2.4355	1	1479900			58614	182	39125	39141	66450	66450					0.10137987540133508
TLSTIEFQQ	9	Unmodified	_TLSTIEFQQ_					0	0	0		nc|ENSG00000258469|P59074|CHMP4BP1	nc|ENSG00000258469|P59074|CHMP4BP1	nc|ENSG00000258469|P59074|CHMP4BP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.2748413085938	2	533.774396	1065.53424	-0.0098307	-5.2474E-06	0.18095	9.6588E-05	0.17112	9.134E-05	533.7736819943196	56.965	0.58759	56.953	56.73	57.317	-0.012199					25	18	2	0	0	0	0.20433	1	5127	5127		68.787	2.3575	1	156340			58615	15299	39126	39142	66451	66451					0.004094289981367183
TLSTLYLVPI	10	Unmodified	_TLSTLYLVPI_					0	0	0			REV__ENSG00000198604|ENST00000360310|BAZ1A	REV__ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3419189453125	2	560.336633	1118.65871	3.1454	0.0017625	3.4672	0.0019428	6.6126	0.0037053	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.85939	1	13170	13170		23.042	2.0956	1	151040	+		58616	23344	39127	39143	66452	66452					0.10412926485469143
TLSTLYLVPI	10	Unmodified	_TLSTLYLVPI_					0	0	0			REV__ENSG00000198604|ENST00000360310|BAZ1A	REV__ENSG00000198604|ENST00000360310|BAZ1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3401489257812	2	560.336633	1118.65871	2.2618	0.0012674	4.146	0.0023231	6.4078	0.0035905	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.86589	1	12334	12334		29.15	3.5755	1	14759000	+		58617	23344	39127	39143	66453	66453					0.10412926485469143
TLSVKGAR	8	Unmodified	_TLSVKGAR_					0	0	0		nc|ENSG00000175894|Q8WU66-2|TSPEAR;ENSG00000175894|ENST00000323084|TSPEAR	nc|ENSG00000175894|Q8WU66-2|TSPEAR	nc|ENSG00000175894|Q8WU66-2|TSPEAR	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.2846374511719	2	416.255977	830.497401	2.6423	0.0010999	-3.9271	-0.0016347	-1.2849	-0.00053483	416.2542879979293	25.583	1.1548	25.152	24.499	25.654	-0.4311					41	26	3	0	0	0	0.4196	1	1261	1261		29.15	0	1	113550			58618	7041	39128	39144	66454	66454					0.07537221962900276
TLSVQLSH	8	Unmodified	_TLSVQLSH_					0	0	0			REV__ENST00000565934.1_1_16:8943287-8943768:+|nuORF	REV__ENST00000565934.1_1_16:8943287-8943768:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.74462890625	2	442.745442	883.476331	0.64691	0.00028642	-1.8484	-0.00081837	-1.2015	-0.00053195	442.74446691856775	89.958	0.92834	90.109	89.829	90.757	0.1519					49	21	3	0	0	0	0.884	1	9011	9011		33.516	3.0119	1	594000	+		58619	28861	39129	39145	66455	66455					0.02993211863383749
TLSVQLSH	8	Unmodified	_TLSVQLSH_					0	0	0			REV__ENST00000565934.1_1_16:8943287-8943768:+|nuORF	REV__ENST00000565934.1_1_16:8943287-8943768:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	442.745442	883.476331	-0.15284	-6.7668E-05	-1.1626	-0.00051472	-1.3154	-0.00058239	442.74476041803246	90.258	0.92232	90.327	90.04	90.962	0.069328	0.068118	0.00055366	NaN	33.516	49	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	421830	+		58620	28861	39129	39145							0.02993211863383749
TLSVQLSH	8	Unmodified	_TLSVQLSH_					0	0	0			REV__ENST00000565934.1_1_16:8943287-8943768:+|nuORF	REV__ENST00000565934.1_1_16:8943287-8943768:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	442.745442	883.476331	1.3957	0.00061796	-1.876	-0.0008306	-0.48027	-0.00021264	442.74404489901764	90.54	0.94027	90.47	90.132	91.073	-0.069977	0.211	-7.8094E-05	NaN	33.516	61	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	443330	+		58621	28861	39129	39145							0.02993211863383749
TLSVQLSH	8	Unmodified	_TLSVQLSH_					0	0	0			REV__ENST00000565934.1_1_16:8943287-8943768:+|nuORF	REV__ENST00000565934.1_1_16:8943287-8943768:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	442.745442	883.476331	1.7912	0.00079304	-3.161	-0.0013995	-1.3698	-0.00060645	442.7439012098544	90.231	0.90166	90.277	90.006	90.908	0.046448	0.018265	-0.0012159	NaN	33.516	36	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	432410	+		58622	28861	39129	39145							0.02993211863383749
TLSVQLSH	8	Unmodified	_TLSVQLSH_					0	0	0			REV__ENST00000565934.1_1_16:8943287-8943768:+|nuORF	REV__ENST00000565934.1_1_16:8943287-8943768:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	442.745442	883.476331	0.64691	0.00028642	-1.8484	-0.00081837	-1.2015	-0.00053195	442.74446691856775	89.958	0.92834	90.109	89.829	90.757	0.1519	-0.14967	-5.3625E-05	NaN	33.516	49	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	594000	+		58623	28861	39129	39145							0.02993211863383749
TLSVWKMY	8	Unmodified	_TLSVWKMY_					0	0	0		ENSG00000160888|ENST00000292433|IER2	ENSG00000160888|ENST00000292433|IER2	ENSG00000160888|ENST00000292433|IER2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.8109130859375	2	514.267696	1026.52084	0.81579	0.00041953	2.1734	0.0011177	2.9892	0.0015373	514.7696897446116	16.879	0.20162	16.392	16.326	16.528	-0.48718					5	4	2	0	0	0	0.4196	1	197	197		4.3163	0	1	12910			58624	5614	39130	39146	66456	66456					0.008638996852141645
TLSWLPPP	8	Unmodified	_TLSWLPPP_					0	0	0		ENST00000553027.1_1_12:49319073-49319295:-|nuORF	ENST00000553027.1_1_12:49319073-49319295:-|nuORF	ENST00000553027.1_1_12:49319073-49319295:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.7632751464844	2	455.755278	909.496004	-1.634	-0.00074469	-3.386	-0.0015432	-5.02	-0.0022879	455.7536181723967	47.814	0.61543	48.283	47.971	48.587	0.46941					29	15	3	0	0	0	0.4196	1	4531	4531		42.474	17.955	1	342360			58625	13692	39131	39147	66457	66457					0.037635878741298257
TLSWPPIP	8	Unmodified	_TLSWPPIP_					0	0	0		ENST00000361084.9_1_1:156030999-156031116:+|nuORF	ENST00000361084.9_1_1:156030999-156031116:+|nuORF	ENST00000361084.9_1_1:156030999-156031116:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.7636413574219	2	455.755278	909.496004	-0.80191	-0.00036547	-4.404	-0.0020071	-5.2059	-0.0023726	455.7531796064918	47.61	0.54664	48.533	48.278	48.824	0.92315					23	13	2	0	0	0	0.4196	1	4527	4527		25.45	0	1	351340			58626	10463	39132	39148	66458	66458					0.037635878741298257
TLTHRKTG	8	Unmodified	_TLTHRKTG_					0	0	0		ENSG00000105131|ENST00000221730|EPHX3	ENSG00000105131|ENST00000221730|EPHX3	ENSG00000105131|ENST00000221730|EPHX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2641906738281	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.87479	1	9517	9517		30.504	1.3541	1	3505500			58627	2187	39133	39149	66459	66459					0.05435722848858404
TLTISSLEPED	11	Unmodified	_TLTISSLEPED_					0	0	0		nc|ENSG00000241351|P04433|IGKV3-11;nc|ENSG00000211632|A0A0A0MRZ8|IGKV3D-11	nc|ENSG00000241351|P04433|IGKV3-11	nc|ENSG00000241351|P04433|IGKV3-11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	602.8018798828125	2	602.800808	1203.58706	0.65075	0.00039227	-0.081136	-4.8909E-05	0.56961	0.00034336	602.8006043046089	72.774	0.78786	72.904	72.521	73.309	0.13064					71	26	4	0	0	0	0.241	2	6692	6684;6692		77.318	20.597	1	436040			58628	15227	39134	39150	66460;66461	66461					-0.006586577297184704
TLTISSLEPED	11	Unmodified	_TLTISSLEPED_					0	0	0		nc|ENSG00000241351|P04433|IGKV3-11;nc|ENSG00000211632|A0A0A0MRZ8|IGKV3D-11	nc|ENSG00000241351|P04433|IGKV3-11	nc|ENSG00000241351|P04433|IGKV3-11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	602.8006591796875	2	602.800808	1203.58706	-0.74749	-0.00045059	1.5752	0.00094956	0.82775	0.00049897	602.8014868217316	72.975	0.77063	73.058	72.668	73.438	0.083138					66	26	3	0	0	0	0.28254	5	6688	6662;6670;6679;6688;6697		75.043	30.666	1	457360			58629	15227	39134	39150	66462;66463;66464;66465;66466	66465					-0.006586577297184704
TLTISSVQAED	11	Unmodified	_TLTISSVQAED_					0	0	0		CON__Q05B55	CON__Q05B55	CON__Q05B55	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.29052734375	2	582.29315	1162.57175	0.64199	0.00037383	-0.55154	-0.00032116	0.090457	5.2673E-05	582.2926336503397	58.987	0.47402	59.074	58.822	59.296	0.087002					40	22	2	0	0	0	0.3308	1	5025	5025		66.962	4.8545	1	279960		+	58630	602	39135	39151	66467	66467					-0.0030352452690749487
TLTISSVQAED	11	Unmodified	_TLTISSVQAED_					0	0	0		CON__Q05B55	CON__Q05B55	CON__Q05B55	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.795166015625	2	582.29315	1162.57175	-0.31654	-0.00018432	0.42911	0.00024987	0.11257	6.5549E-05	582.2932506813911	58.965	0.51068	58.957	58.739	59.25	-0.0074387					37	21	2	0	0	0	0.60888	1	5047	5047		43.419	4.1657	1	212850		+	58631	602	39135	39151	66468	66468					-0.0030352452690749487
TLTISSVQAED	11	Unmodified	_TLTISSVQAED_					0	0	0		CON__Q05B55	CON__Q05B55	CON__Q05B55	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	582.29315	1162.57175	0.50528	0.00029422	-0.19806	-0.00011533	0.30722	0.00017889	582.2928356600099	58.929	0.58304	59.043	58.772	59.355	0.11396	0.018158	-6.2715E-05	NaN	66.962	40	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	264690		+	58632	602	39135	39151							-0.0030352452690749487
TLTITSKGKEN	11	Unmodified	_TLTITSKGKEN_					0	0	0		nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-2|PIGT	nc|ENSG00000124155|Q969N2-4|PIGT	nc|ENSG00000124155|Q969N2-4|PIGT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.3324584960938	2	596.33261	1190.65067	0.92114	0.00054931	-0.45114	-0.00026903	0.47	0.00028028	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.72739	1	9859	9859		27.047	0.3544	1	1402200			58633	3309	39136	39152	66469	66469					0.06296747498072364
TLTLLSALKC	10	Unmodified	_TLTLLSALKC_					0	0	0		ENST00000360057.7_1_7:144320275-144380050:-|nuORF	ENST00000360057.7_1_7:144320275-144380050:-|nuORF	ENST00000360057.7_1_7:144320275-144380050:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8173828125	2	531.81501	1061.61547	1.0705	0.00056928	2.5512	0.0013568	3.6216	0.001926	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.8651	1	10269	10269		25.574	2.5316	1	4490200			58634	10441	39137	39153	66470	66470					0.0871241343654674
TLTLLTGPL	9	Unmodified	_TLTLLTGPL_					0	0	0			REV__ENST00000359928.8_1_15:74315686-74326819:+|nuORF	REV__ENST00000359928.8_1_15:74315686-74326819:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.790771484375	2	464.789318	927.564084	-1.1101	-0.00051598	3.984	0.0018517	2.8738	0.0013357	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.77546	1	2181	2181		31.955	6.5047	1	415400	+		58635	25466	39138	39154	66471	66471					0.09740412734140591
TLTLTPTP	8	Unmodified	_TLTLTPTP_					0	0	0			REV__ENSG00000161638|ENST00000293379|ITGA5	REV__ENSG00000161638|ENST00000293379|ITGA5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2666931152344	2	422.244744	842.474934	-0.3088	-0.00013039	2.2327	0.00094273	1.9239	0.00081234	422.24551122964175	28.2	0.74641	28.103	27.796	28.542	-0.096945					25	17	2	0	0	0	0.4196	1	1717	1717		25.45	0	1	134380	+		58636	20770	39139	39155	66472	66472					0.04739577774614645
TLTTWKRYYLK	11	Unmodified	_TLTTWKRYYLK_					0	0	0			REV__ENST00000238789.9_1_2:24108631-24108697:-|nuORF	REV__ENST00000238789.9_1_2:24108631-24108697:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.1848449707031	3	491.613522	1471.81874	-1.3203	-0.00064909	1.1586	0.00056959	-0.16172	-7.9502E-05	491.9483951716891	64.785	0.4646	64.785	64.609	65.073	0					24	18	2	0	0	0	0.17996	1	5694	5694		8.4073	0	1	53257	+		58637	24221	39140	39156	66473	66473					0.10169854482523988
TLTVSLSL	8	Unmodified	_TLTVSLSL_					0	0	0		ENSG00000113262|ENST00000517717|GRM6	ENSG00000113262|ENST00000517717|GRM6	ENSG00000113262|ENST00000517717|GRM6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2513427734375	2	417.252569	832.490584	-0.040205	-1.6776E-05	1.1748	0.00049019	1.1346	0.00047341	417.25296314698	35.536	1.154	35.476	35.254	36.408	-0.060333					58	32	2	0	0	0	0.80706	1	1950	1950		19.36	0	1	236350			58638	2707	39141	39157	66474	66474					0.06763864291679056
TLVAVKPD	8	Unmodified	_TLVAVKPD_					0	0	0		ENST00000468031.1_1_16:448976-449231:+|nuORF;ENSG00000103202|ENST00000219479|NME4	ENST00000468031.1_1_16:448976-449231:+|nuORF	ENST00000468031.1_1_16:448976-449231:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.7513427734375	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.8347	1	7271	7271		23.042	0	1	423780			58639	2064	39142	39158	66475	66475					0.06383284011519663
TLVAYTTA	8	Unmodified	_TLVAYTTA_					0	0	0			REV__ENSG00000171942|ENST00000305899|OR10H2	REV__ENSG00000171942|ENST00000305899|OR10H2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.227783203125	2	420.229094	838.443634	0.089833	3.775E-05	-2.9174	-0.001226	-2.8276	-0.0011882	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.89962	1	7753	7753		38.806	1.647	1	888480	+		58640	21788	39143	39159	66476	66476					0.01795004740506556
TLVFETVKT	9	Unmodified	_TLVFETVKT_					0	0	0			REV__ENSG00000274102|ENST00000614722|OR4M2	REV__ENSG00000274102|ENST00000614722|OR4M2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.7763671875	2	519.297507	1036.58046	0.53584	0.00027826	-0.44873	-0.00023303	0.087108	4.5235E-05	519.2971722093325	57.367	0.99969	57.922	57.642	58.642	0.55513					55	24	3	0	0	0	0.20789	1	6051	6051		34.173	5.023	1	1017400	+		58641	22120	39144	39160	66477	66477					0.06363493900221329
TLVGLIKP	8	Unmodified	_TLVGLIKP_					0	0	0			REV__nc|ENSG00000204172|Q5VTM2|AGAP9	REV__nc|ENSG00000204172|Q5VTM2|AGAP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.7823486328125	2	420.781296	839.54804	1.1628	0.0004893	2.3373	0.0009835	3.5001	0.0014728	420.78214997955024	36.177	1.3125	36.186	35.614	36.926	0.0092773					54	28	2	0	0	0	0.86288	1	2404	2404		26.796	0	1	98796	+		58642	30158	39145	39161	66478	66478					0.12184751287895779
TLVGRQHISQP	11	Unmodified	_TLVGRQHISQP_					0	0	0			REV__nc|ENSG00000007202|Q14667-2|BLTP2	REV__nc|ENSG00000007202|Q14667-2|BLTP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.3470458984375	2	618.346386	1234.67822	0.55169	0.00034113	-1.3321	-0.00082372	-0.78044	-0.00048258	618.3454418699644	97.724	3.0702	97.772	96.827	99.897	0.048157					199	71	4	0	0	0	0.638	1	10537	10537		40.058	3.6114	1	831610	+		58643	16118	39146	39162	66479	66479					0.07026695548938733
TLVHQIFGG	9	Unmodified	_TLVHQIFGG_					0	0	0		ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.26702880859375	2	486.269084	970.523616	-1.6066	-0.00078124	-2.3049	-0.0011208	-3.9115	-0.0019021	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.76255	1	8398	8398		35.618	0.41757	1	1531500			58644	1026	39147	39163	66480	66480					0.03717491134386819
TLVIISVSP	9	Unmodified	_TLVIISVSP_					0	0	0		ENSG00000073734|ENST00000650372|ABCB11	ENSG00000073734|ENST00000650372|ABCB11	ENSG00000073734|ENST00000650372|ABCB11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7912902832031	2	464.789318	927.564084	-1.14	-0.00052988	4.1432	0.0019257	3.0031	0.0013958	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.7932	1	1785	1785		23.042	0	1	286820			58645	1297	39148	39164	66481	66481					0.09740412734140591
TLVIPITTA	9	Unmodified	_TLVIPITTA_					0	0	0			REV__nc|ENSG00000172534|P51610-2|HCFC1	REV__nc|ENSG00000172534|P51610-2|HCFC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.79168701171875	2	464.789318	927.564084	0.090365	4.2E-05	2.7326	0.0012701	2.823	0.0013121	464.7905453409174	36.857	1.3586	36.797	35.976	37.335	-0.060333					62	38	2	0	0	0	0.78536	1	2117	2117		29.15	2.3535	1	232790	+		58646	21840	39149	39165	66482	66482					0.09740412734129222
TLVKDRKRQQR	11	Unmodified	_TLVKDRKRQQR_					0	0	0			REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.95556640625	3	476.623303	1426.84808	2.8119	0.0013402	-2.0338	-0.00096936	0.7781	0.00037086	476.6222454158013	111.71	0.785	111.69	111.21	112	-0.025414					63	29	3	0	0	0	0.80813	1	12366	12366		9.6461	0	1	40566	+		58647	20081	39150	39166	66483	66483					0.1517281155136061
TLVLPTGII	9	Unmodified	_TLVLPTGII_					0	0	0		ENST00000497229.1_1_3:183950976-183951198:+|nuORF;ENSG00000145198|ENST00000691901|VWA5B2	ENST00000497229.1_1_3:183950976-183951198:+|nuORF	ENST00000497229.1_1_3:183950976-183951198:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8008728027344	2	463.799686	925.584819	0.16592	7.6954E-05	2.5876	0.0012001	2.7535	0.0012771	463.80056454713036	45.615	1.6023	45.596	45.187	46.789	-0.018585					71	39	3	0	0	0	0.7932	1	3602	3602		23.042	0	1	269820			58648	4751	39151	39167	66484	66484					0.11905003113804469
TLVPITGRSF	10	Unmodified	_TLVPITGRSF_					0	0	0		ENSG00000267909|ENST00000599174|CCDC177	ENSG00000267909|ENST00000599174|CCDC177	ENSG00000267909|ENST00000599174|CCDC177	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.8172607421875	2	545.816399	1089.61824	0.11328	6.183E-05	-0.0090844	-4.9584E-06	0.1042	5.6872E-05	545.8161499984518	68.441	0.82027	68.404	68.067	68.887	-0.036301					63	27	3	0	0	0	0.80179	1	6636	6636		39.253	0	1	496740			58649	8959	39152	39168	66485	66485					0.07702004885709357
TLVPLLLT	8	Unmodified	_TLVPLLLT_					0	0	0		nc|ENSG00000184313|Q68CQ1-1|MROH7;ENSG00000184313|ENST00000421030|MROH7;nc|ENSG00000184313|Q68CQ1-9|MROH7	nc|ENSG00000184313|Q68CQ1-1|MROH7	nc|ENSG00000184313|Q68CQ1-1|MROH7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3003234863281	2	435.288954	868.563355	-0.96855	-0.0004216	2.0949	0.00091188	1.1263	0.00049028	435.29029314030697	71.793	0.20884	72.178	72.082	72.291	0.38449					6	4	2	0	0	0	0.4196	1	8003	8003		17.365	0	1	31061			58650	7600	39153	39169	66486	66486					0.12381618085100854
TLVPPIQSMSH	11	Unmodified	_TLVPPIQSMSH_					0	0	0			REV__ENSG00000181378|ENST00000341552|CFAP65	REV__ENSG00000181378|ENST00000341552|CFAP65	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	606.174560546875	2	605.318448	1208.62234	-0.42141	-0.00025509	-2.6033	-0.0015758	-3.0247	-0.0018309	605.3166726854737	47.7	0.77185	48.169	47.815	48.587	0.46941					40	19	3	0	0	0	0.17382	1	4603	4603		16.007	0	1	653250	+		58651	22454	39154	39170	66487	66487					0.02637726317107081
TLVQLLLEL	9	Unmodified	_TLVQLLLEL_					0	0	0		ENSG00000167604|ENST00000606253|NFKBID;nc|ENSG00000167604|Q8NI38|NFKBID;nc|ENSG00000167604|Q8NI38-3|NFKBID	ENSG00000167604|ENST00000606253|NFKBID	ENSG00000167604|ENST00000606253|NFKBID	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.28173828125	2	521.33135	1040.64815	-0.87401	-0.00045565	-0.22279	-0.00011615	-1.0968	-0.0005718	521.3308792723357	42.715	0.66187	43.148	42.882	43.544	0.4334					22	15	3	0	0	0	0.20789	1	3845	3845		56.721	21.103	1	185820			58652	6305	39155	39171	66488	66488					0.12944943831053024
TLVRDMLKI	9	Unmodified	_TLVRDMLKI_					0	0	0		ENST00000509647.1_1_4:187647586-187647802:-|nuORF	ENST00000509647.1_1_4:187647586-187647802:-|nuORF	ENST00000509647.1_1_4:187647586-187647802:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.8292846679688	2	544.828452	1087.64235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.417	1	41.006	40.506	41.506	0.58915								0	0	0	0.28009	1	3464	3464		39.253	2.0937	1				58653	12994	39156	39172	66489	66489					0.10203522047731894
TLVRTFPPP	9	Unmodified	_TLVRTFPPP_					0	0	0		ENST00000307750.4_1_9:37442508-37465359:-|nuORF	ENST00000307750.4_1_9:37442508-37465359:-|nuORF	ENST00000307750.4_1_9:37442508-37465359:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.2977294921875	2	514.300384	1026.58622	-0.049414	-2.5414E-05	-4.0876	-0.0021023	-4.137	-0.0021277	514.2983333190766	96.625	2.0478	96.687	95.464	97.512	0.062225					95	47	3	0	0	0	0.7932	1	10141	10141		26.693	2.4902	1	523750			58654	9877	39157	39173	66490	66490					0.07398637202550162
TLVRVSPKRVV	11	Unmodified	_TLVRVSPKRVV_					0	0	0			REV__ENST00000399070.3_2_18:32886564-32887857:+|nuORF	REV__ENST00000399070.3_2_18:32886564-32887857:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.60528564453125	3	418.60659	1252.79794	-0.022256	-9.3163E-06	-4.4541	-0.0018645	-4.4763	-0.0018738	418.6046851198204	49.071	2.7151	49.065	47.966	50.681	-0.0056381					104	63	2	0	0	0	0.77205	1	4175	4175		17.167	3.0807	1	111610	+		58655	26220	39158	39174	66491	66491					0.18165308893503607
TLVSLPQLLLL	11	Unmodified	_TLVSLPQLLLL_					0	0	0			REV__ENSG00000160753|ENST00000368352|RUSC1	REV__ENSG00000160753|ENST00000368352|RUSC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.929443359375	3	403.93208	1208.77441	-1.8895	-0.00076324	-4.4403	-0.0017936	-6.3298	-0.0025568	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.7896	1	3471	3471		13.508	0.55046	1	2300300	+		58656	20737	39159	39175	66492	66492					0.17837450336355687
TLVSPAILL	9	Unmodified	_TLVSPAILL_					0	0	0			REV__ENST00000448464.6_1_8:95940760-95940952:-|nuORF	REV__ENST00000448464.6_1_8:95940760-95940952:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8008117675781	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.7932	1	3713	3713		12.959	0	1	251610	+		58657	26838	39160	39176	66493	66493					0.11905003113804469
TLVTIGGF	8	Unmodified	_TLVTIGGF_					0	0	0			REV__nc|ENSG00000172995|Q9UBL0-4|ARPP21	REV__nc|ENSG00000172995|Q9UBL0-4|ARPP21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.231689453125	2	404.234179	806.453805	-1.8204	-0.00073588	-0.96943	-0.00039188	-2.7898	-0.0011278	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.86288	1	8144	8144		26.796	1.3459	1	4754100	+		58658	21878	39161	39177	66494	66494					0.04283612465769693
TLVVSPLLS	9	Unmodified	_TLVVSPLLS_					0	0	0		ENSG00000160957|ENST00000617875|RECQL4	ENSG00000160957|ENST00000617875|RECQL4	ENSG00000160957|ENST00000617875|RECQL4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7910461425781	2	464.789318	927.564084	-1.14	-0.00052988	4.1432	0.0019257	3.0031	0.0013958	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.76764	1	1759	1759		34.173	0	1	286820			58659	5619	39162	39178	66495	66495					0.09740412734140591
TLVYSVTT	8	Unmodified	_TLVYSVTT_					0	0	0		ENSG00000176198|ENST00000641082|OR11H4;nc|ENSG00000176198|Q8NGC9|OR11H4	ENSG00000176198|ENST00000641082|OR11H4	ENSG00000176198|ENST00000641082|OR11H4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.24078369140625	2	442.242201	882.469849	-1.4215	-0.00062863	-1.4323	-0.00063341	-2.8537	-0.001262	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.87922	1	7828	7828		31.955	0	1	1219900			58660	7062	39163	39179	66496	66496					0.023912739119850812
TLWCQRGGG	9	Unmodified	_TLWCQRGGG_					0	0	0		ENST00000527800.5_1_16:66583301-66583592:-|nuORF	ENST00000527800.5_1_16:66583301-66583592:-|nuORF	ENST00000527800.5_1_16:66583301-66583592:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.2362365722656	2	489.234719	976.454884	-0.71864	-0.00035159	4.1655	0.0020379	3.4469	0.0016863	489.2367667655941	86.159	1.8924	86.606	85.945	87.837	0.44736					116	45	5	0	0	0	0.77696	1	10164	10164		31.53	3.2755	1	3138400			58661	13291	39164	39180	66497	66497					-0.03428496436970363
TLWMAGWYFNQ	11	Unmodified	_TLWMAGWYFNQ_					0	0	0		ENSG00000085871|ENST00000265498|MGST2	ENSG00000085871|ENST00000265498|MGST2	ENSG00000085871|ENST00000265498|MGST2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.2764587402344	3	472.885024	1415.63324	-0.62448	-0.00029531	0.282	0.00013335	-0.34248	-0.00016195	472.8846064694747	48.686	0.55762	49.59	49.33	49.887	0.90424					32	13	4	0	0	0	0.17521	1	4761	4761		17.167	3.6588	1	418950			58662	1544	39165	39181	66498	66498					-0.05794871308603433
TLWPSARP	8	Unmodified	_TLWPSARP_					0	0	0			REV__ENST00000291295.13_1_19:47104533-47109093:+|nuORF	REV__ENST00000291295.13_1_19:47104533-47109093:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.25286865234375	2	464.255977	926.497401	-1.5107	-0.00070134	-2.8137	-0.0013063	-4.3244	-0.0020076	464.25458148678484	81.557	1.8994	81.671	80.874	82.774	0.11426					117	44	3	0	0	0	0.89043	1	7693	7693		35.618	0.41757	1	403390	+		58663	24667	39166	39182	66499	66499					0.03121221962896925
TLWQLHWVLAE	11	Unmodified	_TLWQLHWVLAE_					0	0	0		ENST00000452399.1_1:148932830-148951295:+|nuORF;ENST00000539543.1_1:148932830-148951295:+|nuORF	ENST00000452399.1_1:148932830-148951295:+|nuORF	ENST00000452399.1_1:148932830-148951295:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2652282714844	3	465.918834	1394.73467	-0.023666	-1.1026E-05	-0.59958	-0.00027936	-0.62325	-0.00029038	465.9184705680172	36.682	0.57821	36.664	36.376	36.955	-0.018673					20	12	2	0	0	0	0.17586	1	2375	2375		11.932	0	1	78239			58664	11917	39167	39183	66500	66500					0.0530932338558614
TLYNALFHS	9	Unmodified	_TLYNALFHS_					0	0	0			REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.1322631835938	2	533.271824	1064.5291	0.36879	0.00019667	-1.4571	-0.00077702	-1.0883	-0.00058036	533.2704533411572	32.616	0.65535	32.562	32.198	32.853	-0.05434					20	14	2	0	0	0	0.20789	1	1915	1915		39.253	0	1	38210	+		58665	16637	39168	39184	66501	66501					-0.0005883007381726202
TLYNALFHS	9	Unmodified	_TLYNALFHS_					0	0	0			REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	533.271824	1064.5291	0.17371	9.2633E-05	-1.8783	-0.0010016	-1.7046	-0.00090901	533.2706475817373	32.486	0.55037	32.497	32.112	32.662	0.010899	-0.032354	-0.00022653	NaN	39.253	20	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21561	+		58666	16637	39168	39184							-0.0005883007381726202
TLYRVPLIPK	10	Unmodified	_TLYRVPLIPK_					0	0	0		ENSG00000139044|ENST00000266383|B4GALNT3	ENSG00000139044|ENST00000266383|B4GALNT3	ENSG00000139044|ENST00000266383|B4GALNT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.25616455078125	3	400.588536	1198.74378	0.18537	7.4256E-05	-2.9295	-0.0011735	-2.7442	-0.0010993	400.5871088639427	16.252	0.32049	15.653	15.465	15.786	-0.59873					15	6	3	0	0	0	0.86551	1	85	85		14.694	0	1	117070			58667	4344	39169	39185	66502	66502					0.15235716741926808
TLYSVGVTLK	10	Unmodified	_TLYSVGVTLK_					0	0	0		ENST00000589878.5_1_19:34663659-34686187:+|nuORF	ENST00000589878.5_1_19:34663659-34686187:+|nuORF	ENST00000589878.5_1_19:34663659-34686187:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.8189697265625	2	540.818607	1079.62266	-0.91455	-0.00049461	0.97363	0.00052656	0.059075	3.1949E-05	540.818950152999	56.552	0.73816	56.949	56.676	57.414	0.39672					42	16	3	0	0	0	0.38353	2	5846	5846;5859		65.465	19.493	1	1732900			58668	14248	39170	39186	66503;66504	66503					0.08603469308627609
TLYSVGVTLK	10	Unmodified	_TLYSVGVTLK_					0	0	0		ENST00000589878.5_1_19:34663659-34686187:+|nuORF	ENST00000589878.5_1_19:34663659-34686187:+|nuORF	ENST00000589878.5_1_19:34663659-34686187:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8181762695312	2	540.818607	1079.62266	0.098678	5.3367E-05	-0.043549	-2.3552E-05	0.05513	2.9815E-05	540.8184275670533	56.473	0.6984	57.033	56.703	57.401	0.55954					42	15	3	0	0	0	0.16188	2	5844	5844;5856		93.598	19.623	1	1990900			58669	14248	39170	39186	66505;66506	66505					0.08603469308627609
TLYVYSWFV	9	Unmodified	_TLYVYSWFV_					0	0	0			REV__ENST00000367619.7_1_1:179314172-179316743:+|nuORF	REV__ENST00000367619.7_1_1:179314172-179316743:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3707275390625	2	589.30005	1176.58555	-0.24795	-0.00014612	2.7991	0.0016495	2.5511	0.0015034	589.301562411532	110.39	1.2046	110.39	110.16	111.36	0					63	36	3	0	0	0	0.20789	1	11534	11534		26.796	4.8362	1	574490	+		58670	25573	39171	39187	66507	66507					0.00431797762826136
TMARALGR	8	Unmodified	_TMARALGR_					0	0	0		nc|ENSG00000166359|Q6ZMY6-2|WDR88;ENSG00000166359|ENST00000355868|WDR88	nc|ENSG00000166359|Q6ZMY6-2|WDR88	nc|ENSG00000166359|Q6ZMY6-2|WDR88	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2628173828125	2	438.247629	874.480705	-2.599	-0.001139	-0.65792	-0.00028833	-3.2569	-0.0014273	438.2473937385502	41.29	0.17576	41.704	41.647	41.823	0.4139					12	4	3	0	0	0	0.4196	1	3613	3613		44.117	3.5442	1	796840			58671	6184	39172	39188	66508	66508					0.03844397805312383
TMAYLLNR	8	Unmodified	_TMAYLLNR_					0	0	0		ENSG00000112893|ENST00000261483|MAN2A1	ENSG00000112893|ENST00000261483|MAN2A1	ENSG00000112893|ENST00000261483|MAN2A1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.2960510253906	2	491.262945	980.511337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.262	1	67.314	66.814	67.814	0.052368								0	0	0	0.29498	1	5984	5984		26.796	2.5934	1				58672	2686	39173	39189	66509	66509					0.020301313996810677
TMICKHKDS	9	Carbamidomethyl (C)	_TMIC(Carbamidomethyl (C))KHKDS_	TMIC(1)KHKDS		TMIC(41)KHKDS		0	1	0			REV__ENSG00000247746|ENST00000500968|USP51	REV__ENSG00000247746|ENST00000500968|USP51	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	559.9905395507812	2	560.267901	1118.52125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.568	1	77.66	77.16	78.16	0.091438								0	0	0	0.29273	1	7253	7253		40.778	6.6056	1		+		58673	23858	39174	39190	66510	66510	288				-0.03327048657274645
TMIDTLKKL	9	Unmodified	_TMIDTLKKL_					0	0	0		ENSG00000182993|ENST00000330828|C12orf60	ENSG00000182993|ENST00000330828|C12orf60	ENSG00000182993|ENST00000330828|C12orf60	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.81689453125	2	531.81501	1061.61547	0.70533	0.00037511	2.7047	0.0014384	3.41	0.0018135	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.78536	1	8447	8447		29.15	1.2673	1	1163300			58674	7491	39175	39191	66511	66511					0.0871241343654674
TMIPSLRG	8	Unmodified	_TMIPSLRG_					0	0	0			REV__ENSG00000150907|ENST00000379561|FOXO1	REV__ENSG00000150907|ENST00000379561|FOXO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26556396484375	2	437.744388	873.474223	1.7111	0.00074902	2.9626	0.0012969	4.6737	0.0020459	437.7453046731138	24.07	0.2507	23.557	23.408	23.658	-0.51365					7	5	2	0	0	0	0.4196	1	1124	1124		29.15	3.6994	1	27343	+		58675	20224	39176	39192	66512	66512					0.032424598539364524
TMKPKLVPCLN	11	Unmodified	_TMKPKLVPCLN_					0	0	0			REV__nc|ENSG00000069020|O15021-2|MAST4	REV__nc|ENSG00000069020|O15021-2|MAST4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	622.3466796875	2	622.348694	1242.68284	1.3041	0.0008116	-3.4662	-0.0021572	-2.1621	-0.0013456	622.3465977924652	95.841	2.6338	96.072	95.148	97.782	0.23103					155	62	3	0	0	0	0.67778	1	9823	9823		35.152	2.3396	1	379700	+		58676	16574	39177	39193	66513	66513					0.07120120375861916
TMKRGKTEER	10	Oxidation (M)	_TM(Oxidation (M))KRGKTEER_		TM(1)KRGKTEER		TM(55)KRGKTEER	0	0	1			REV__ENST00000488429.5_1_9:124214542-124223533:-|nuORF	REV__ENST00000488429.5_1_9:124214542-124223533:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.328369140625	2	626.327336	1250.64012	-0.52598	-0.00032944	1.0101	0.00063265	0.48411	0.00030321	626.3277375544901	53.044	1.0318	53.02	52.658	53.69	-0.023849					62	25	3	0	0	0	0.51401	1	4721	4721		54.722	11.072	1	183520	+		58677	23462	39178	39194	66514	66514		361			0.024824415719422177
TMPAVPAGH	9	Unmodified	_TMPAVPAGH_					0	0	0			REV__ENSG00000188293|ENST00000437936|IGFL1	REV__ENSG00000188293|ENST00000437936|IGFL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.2703552246094	2	440.720913	879.427273	-0.1707	-7.5229E-05	0.32581	0.00014359	0.15511	6.836E-05	440.71985553329114	63.35	0.12447	63.316	63.207	63.331	-0.03371					6	5	2	0	0	0	0.20789	1	6001	6001		13.775	0	1	14535	+		58678	22990	39179	39195	66515	66515					-0.0172639969721331
TMPESPSSSTT	11	Unmodified	_TMPESPSSSTT_					0	0	0		ENSG00000105866|ENST00000222584|SP4	ENSG00000105866|ENST00000222584|SP4	ENSG00000105866|ENST00000222584|SP4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.2786865234375	2	562.742436	1123.47032	-0.77495	-0.0004361	-1.0608	-0.00059694	-1.8357	-0.001033	562.7416349517869	37.282	0.57347	37.294	37.017	37.591	0.011173					28	12	3	0	0	0	0.17385	1	2506	2506		19.104	0	1	159500			58679	2257	39180	39196	66516	66516					-0.08647719221107764
TMPKPPKP	8	Unmodified	_TMPKPPKP_					0	0	0			REV__nc|ENSG00000117461|Q92569-2|PIK3R3	REV__nc|ENSG00000117461|Q92569-2|PIK3R3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6142272949219	2	448.257131	894.499709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.309	1	65.309	64.809	65.809	0								0	0	0	0.29353	1	5762	5762		28.254	1.4582	1		+		58680	18263	39181	39197	66517	66517					0.04823934376338457
TMPLKIPIAS	10	Unmodified	_TMPLKIPIAS_					0	0	0			REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|108|2|sense	REV__L1PA3_dup529|chr1:172314247-172320395:+|1.4249117898178572|0.1362069408225553|3.39|63.0|108|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	535.8155517578125	2	535.817553	1069.62055	1.245	0.00066711	-1.3422	-0.00071916	-0.09714	-5.2049E-05	535.8171123630409	99.147	1.5743	99.195	98.765	100.34	0.047523					65	36	3	0	0	0	0.85251	1	10604	10604		19.997	2.6318	1	436170	+		58681	29559	39182	39198	66518	66518					0.08852717299146207
TMPSNRGRTE	10	Unmodified	_TMPSNRGRTE_					0	0	0			REV__ENST00000376770.5_1_1:11718353-11718645:+|nuORF	REV__ENST00000376770.5_1_1:11718353-11718645:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.8174438476562	2	574.777479	1147.5404	0.037918	2.1795E-05	2.7698	0.001592	2.8077	0.0016138	574.7798602534149	35.616	0.79837	35.864	35.515	36.314	0.24769					46	20	3	0	0	0	0.37624	1	2753	2753		32.812	0	1	294670	+		58682	25845	39183	39199	66519	66519					-0.027463760419777827
TMPVAYKEY	9	Unmodified	_TMPVAYKEY_					0	0	0		ENSG00000092295|ENST00000206765|TGM1;nc|ENSG00000092295|P22735-2|TGM1	ENSG00000092295|ENST00000206765|TGM1	ENSG00000092295|ENST00000206765|TGM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	551.2694091796875	2	551.267893	1100.52123	-1.5704	-0.00086571	3.7057	0.0020428	2.1353	0.0011771	551.2697324498604	58.71	0.79128	59.102	58.693	59.485	0.39209					38	18	3	0	0	0	0.30689	1	6164	6164		64.207	4.2765	1	892590			58683	1696	39184	39200	66520	66520					-0.025007253856074385
TMVDGVAL	8	Unmodified	_TMVDGVAL_					0	0	0			REV__ENST00000515594.5_1_6:64345874-64401682:+|nuORF	REV__ENST00000515594.5_1_6:64345874-64401682:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2088623046875	2	403.209847	804.40514	-1.2088	-0.00048741	-0.91536	-0.00036908	-2.1242	-0.00085649	403.20939277352	86.047	3.2334	86.047	85.315	88.548	0					134	74	4	0	0	0	0.88915	1	8211	8211		35.201	0	1	1412000	+		58684	28035	39185	39201	66521	66521					-0.004886241656436141
TMVDGVAL	8	Unmodified	_TMVDGVAL_					0	0	0			REV__ENST00000515594.5_1_6:64345874-64401682:+|nuORF	REV__ENST00000515594.5_1_6:64345874-64401682:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2090148925781	2	403.209847	804.40514	-1.8186	-0.00073328	-0.268	-0.00010806	-2.0866	-0.00084134	403.20969687299277	85.674	2.1245	85.86	85.144	87.269	0.18523					94	49	3	0	0	0	0.82464	1	8395	8395		21.702	0	1	1250400	+		58685	28035	39185	39201	66522	66522					-0.004886241656436141
TMVDGVAL	8	Unmodified	_TMVDGVAL_					0	0	0			REV__ENST00000515594.5_1_6:64345874-64401682:+|nuORF	REV__ENST00000515594.5_1_6:64345874-64401682:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.2088928222656	2	403.209847	804.40514	1.1408	0.00046	-3.5043	-0.001413	-2.3635	-0.00095298	403.208345572438	85.63	1.9726	86.071	85.621	87.594	0.44144					91	47	3	0	0	0	0.82464	1	10006	10006		21.702	0	1	1218200	+		58686	28035	39185	39201	66523	66523					-0.004886241656436141
TMVLGIYYPLI	11	Unmodified	_TMVLGIYYPLI_					0	0	0			REV__ENSG00000184408|ENST00000331113|KCND2	REV__ENSG00000184408|ENST00000331113|KCND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.361083984375	2	641.859418	1281.70428	1.706	0.001095	-1.3766	-0.00088359	0.32944	0.00021145	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.75041	1	12980	12980		21.96	0	1	27133000	+		58687	22674	39186	39202	66524	66524					0.07469828676198631
TMVLGIYYPLI	11	Unmodified	_TMVLGIYYPLI_					0	0	0			REV__ENSG00000184408|ENST00000331113|KCND2	REV__ENSG00000184408|ENST00000331113|KCND2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8576049804688	2	641.859418	1281.70428	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.93	1	118.99	118.49	119.49	0.060577								0	0	0	0.56276	1	12501	12501		26.693	6.6961	1		+		58688	22674	39186	39202	66525	66525					0.07469828676198631
TMVQKGPLDLI	11	Unmodified	_TMVQKGPLDLI_					0	0	0		nc|ENSG00000019144|Q86UU1-2|PHLDB1;ENSG00000019144|ENST00000600882|PHLDB1;ENST00000525427.1_1_11:118484551-118485441:+|nuORF;nc|ENSG00000019144|Q86UU1-3|PHLDB1	nc|ENSG00000019144|Q86UU1-2|PHLDB1	nc|ENSG00000019144|Q86UU1-2|PHLDB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.8998107910156	3	405.565291	1213.67404	-1.5366	-0.00062318	0.43469	0.0001763	-1.1019	-0.00044688	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.71207	1	5572	5572		29.551	5.0316	1	187890			58689	836	39187	39203	66526	66526					0.0757547001101102
TMWLPPAVLQ	10	Unmodified	_TMWLPPAVLQ_					0	0	0		nc|ENSG00000106258|P20815-2|CYP3A5	nc|ENSG00000106258|P20815-2|CYP3A5	nc|ENSG00000106258|P20815-2|CYP3A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.3110961914062	2	578.315177	1154.6158	-1.4027	-0.0008112	-4.4025	-0.002546	-5.8052	-0.0033572	578.3122696398594	56.678	0.69374	57.075	56.72	57.414	0.39672					53	15	5	0	0	0	0.42393	1	5860	5860		62.107	9.1707	1	1103600			58690	14833	39188	39204	66527	66527					0.04467833156400047
TMYSNLPAM	9	2 Oxidation (M)	_TM(Oxidation (M))YSNLPAM(Oxidation (M))_		TM(1)YSNLPAM(1)		TM(44)YSNLPAM(44)	0	0	2			REV__ENSG00000170608|ENST00000302177|FOXA3	REV__ENSG00000170608|ENST00000302177|FOXA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.227783203125	2	530.22791	1058.44127	-0.18075	-9.5841E-05	0.72214	0.0003829	0.54138	0.00028706	530.2281044813709	29.55	0.60334	29.617	29.402	30.005	0.066727					49	26	3	0	0	0	0.64922	1	1258	1258		44.117	6.9577	1	184430	+		58691	21674	39189	39205	66528	66528		324;325			-0.08561535051080682
TNAEIQRLKE	10	Unmodified	_TNAEIQRLKE_					0	0	0		nc|ENSG00000152672|Q8N1N0-2|CLEC4F;ENSG00000152672|ENST00000272367|CLEC4F	nc|ENSG00000152672|Q8N1N0-2|CLEC4F	nc|ENSG00000152672|Q8N1N0-2|CLEC4F	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	601.8587036132812	2	601.330402	1200.64625	0.90126	0.00054196	2.8344	0.0017044	3.7356	0.0022463	601.331999712956	103.38	1.0323	103.5	103.17	104.21	0.12622					32	25	2	0	0	0	0.37624	1	10950	10950		44.377	3.599	1	426320			58692	5191	39190	39206	66529	66529					0.05395283075131374
TNAKRKLSD	9	Unmodified	_TNAKRKLSD_					0	0	0		ENSG00000180182|ENST00000324817|MED14	ENSG00000180182|ENST00000324817|MED14	ENSG00000180182|ENST00000324817|MED14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7933349609375	2	516.793455	1031.57236	-1.1229	-0.00058032	0.9456	0.00048868	-0.17733	-9.1644E-05	516.7939356050468	88.475	2.4458	88.946	87.694	90.139	0.47068					178	59	4	0	0	0	0.76764	1	10472	10472		34.173	0	1	833210			58693	7316	39191	39207	66530	66530					0.057833597034687045
TNALLPDPY	9	Unmodified	_TNALLPDPY_					0	0	0		ENSG00000145391|ENST00000274031|SETD7	ENSG00000145391|ENST00000274031|SETD7	ENSG00000145391|ENST00000274031|SETD7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.2584533691406	2	502.258382	1002.50221	-0.073088	-3.6709E-05	-0.032114	-1.613E-05	-0.1052	-5.2839E-05	502.25824418455375	54.258	0.6262	54.843	54.585	55.211	0.58474					42	14	4	0	0	0	0.38563	1	5534	5534		58.782	2.0609	1	1126200			58694	4769	39192	39208	66531	66531					0.0010606131498889226
TNALSPIAT	9	Unmodified	_TNALSPIAT_					0	0	0			REV__ENSG00000257743|ENST00000477922|MGAM2	REV__ENSG00000257743|ENST00000477922|MGAM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	444.2450866699219	2	444.245275	886.475997	-1.7944	-0.00079716	2.4102	0.0010707	0.61582	0.00027358	444.24618846996606	107.22	1.5901	107.26	106.2	107.79	0.036125					85	37	4	0	0	0	0.71772	1	11453	11453		39.253	10.103	1	2474000	+		58695	23924	39193	39209	66532	66532					0.028217921435157223
TNCFRAER	8	Unmodified	_TNCFRAER_					0	0	0			REV__ENSG00000119203|ENST00000238112|CPSF3	REV__ENSG00000119203|ENST00000238112|CPSF3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.7373352050781	2	498.737625	995.460698	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.893	1	24.943	24.443	25.443	0.050451								0	0	0	0.30074	1	953	953		40.778	8.8233	1		+		58696	18342	39194	39210	66533	66533					-0.03721397925312431
TNDGEEKMEG	10	Unmodified	_TNDGEEKMEG_					0	0	0		ENSG00000023608|ENST00000216294|SNAPC1	ENSG00000023608|ENST00000216294|SNAPC1	ENSG00000023608|ENST00000216294|SNAPC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.7238159179688	2	555.22441	1108.43427	0.47586	0.00026421	-2.5183	-0.0013982	-2.0424	-0.001134	555.2229366074037	76.69	0.49088	76.738	76.324	76.815	0.047974					33	20	2	0	0	0	0.5442	1	7490	7490		53.089	1.8963	1	166340			58697	861	39195	39211	66534	66534					-0.11561176397981399
TNDLLKVRLH	10	Unmodified	_TNDLLKVRLH_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.5745849609375	3	403.575178	1207.70371	-0.18746	-7.5654E-05	-0.52947	-0.00021368	-0.71693	-0.00028934	403.57480473047985	82.306	1.7649	82.372	81.231	82.996	0.065918					98	40	4	0	0	0	0.81117	2	8149	8073;8149		38.754	8.1847	1	480930	+		58698	16105	39196	39212	66535;66536	66536					0.10816170071370834
TNDLLKVRLH	10	Unmodified	_TNDLLKVRLH_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.57452392578125	3	403.575178	1207.70371	0.62042	0.00025038	-1.5074	-0.00060836	-0.887	-0.00035797	403.5745077021451	83.731	2.4581	83.662	83.085	85.543	-0.069313					131	56	3	0	0	0	0.86338	1	8532	8532		31.634	1.0654	1	315140	+		58699	16105	39196	39212	66537	66537					0.10816170071370834
TNDLLKVRLH	10	Unmodified	_TNDLLKVRLH_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.574951171875	3	403.575178	1207.70371	2.7142	0.0010954	-3.6925	-0.0014902	-0.97834	-0.00039483	403.5735867782374	82.542	1.5525	82.601	81.516	83.068	0.059158					87	35	3	0	0	0	0.85979	1	8248	8248		35.178	5.6275	1	371500	+		58700	16105	39196	39212	66538	66538					0.10816170071370834
TNDLLKVRLH	10	Unmodified	_TNDLLKVRLH_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.57470703125	3	403.575178	1207.70371	-1.8285	-0.00073793	1.0097	0.0004075	-0.81877	-0.00033043	403.5754909660959	80.353	1.0354	80.49	79.889	80.924	0.13702					64	31	3	0	0	0	0.71918	1	7652	7652		43.651	12.017	1	264210	+		58701	16105	39196	39212	66539	66539					0.10816170071370834
TNDLLKVRLH	10	Unmodified	_TNDLLKVRLH_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5742492675781	3	403.575178	1207.70371	-1.8238	-0.00073605	0.70537	0.00028467	-1.1185	-0.00045138	403.575388315242	82.768	3.2423	82.923	82.261	85.503	0.15474					165	75	3	0	0	0	0.71918	1	7941	7941		43.651	2.8726	1	1511600	+		58702	16105	39196	39212	66540	66540					0.10816170071370834
TNDLLKVRLH	10	Unmodified	_TNDLLKVRLH_					0	0	0			REV__ENSG00000006607|ENST00000264042|FARP2	REV__ENSG00000006607|ENST00000264042|FARP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57464599609375	3	403.575178	1207.70371	-0.21515	-8.6831E-05	-0.71244	-0.00028752	-0.9276	-0.00037436	403.57486213587435	79.28	1.3173	79.83	78.938	80.256	0.54945					66	30	3	0	0	0	0.86549	1	9143	9143		29.551	0	1	2125200	+		58703	16105	39196	39212	66541	66541					0.10816170071370834
TNEELKKKN	9	Unmodified	_TNEELKKKN_					0	0	0		nc|ENSG00000174450|Q8N9W4-2|GOLGA6L2;nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2;ENSG00000174450|ENST00000567107|GOLGA6L2	nc|ENSG00000174450|Q8N9W4-2|GOLGA6L2	nc|ENSG00000174450|Q8N9W4-2|GOLGA6L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3056030273438	2	552.306395	1102.59824	2.2801	0.0012593	-2.1564	-0.001191	0.1237	6.8322E-05	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.77244	1	9884	9884		32.812	0	1	1797400			58704	6935	39197	39213	66542	66542					0.05104209155092576
TNGKLLLAVF	10	Unmodified	_TNGKLLLAVF_					0	0	0		ENSG00000179934|ENST00000326306|CCR8	ENSG00000179934|ENST00000326306|CCR8	ENSG00000179934|ENST00000326306|CCR8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3259887695312	2	538.329142	1074.64373	-0.15636	-8.4174E-05	-4.0212	-0.0021647	-4.1776	-0.0022489	538.3269075153179	101.16	2.8222	101.19	100.44	103.26	0.031036					310	67	7	0	0	0	0.86763	1	11054	11054		26.693	2.1737	1	74691000			58705	7307	39198	39214	66543	66543					0.10939479408125408
TNGKLLLAVF	10	Unmodified	_TNGKLLLAVF_					0	0	0		ENSG00000179934|ENST00000326306|CCR8	ENSG00000179934|ENST00000326306|CCR8	ENSG00000179934|ENST00000326306|CCR8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3261108398438	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.85466	1	12867	12867		20.947	1.8434	1	4041000			58706	7307	39198	39214	66544	66544					0.10939479408125408
TNGSVKKLKG	10	Unmodified	_TNGSVKKLKG_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|43|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|43|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|2.081799135651781|0.185927186723819|3.49|63.0|43|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3113403320312	2	516.314023	1030.61349	1.0503	0.0005423	-0.22042	-0.00011381	0.8299	0.00042849	516.3139077624099	19.279	0.18587	19.352	19.268	19.454	0.073465					7	5	2	0	0	0	0.86047	1	384	384		23.523	1.5628	1	26366			58707	14513	39199	39215	66545	66545					0.0994112074295117
TNGVTGVLFIL	11	Unmodified	_TNGVTGVLFIL_					0	0	0			REV__ENSG00000182687|ENST00000329003|GALR2	REV__ENSG00000182687|ENST00000329003|GALR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3302612304688	2	567.331882	1132.64921	1.2029	0.00068247	-3.4414	-0.0019524	-2.2385	-0.00127	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.7144	1	10505	10505		29.17	1.2878	1	4990000	+		58708	22543	39200	39216	66546	66546					0.0881915819995811
TNHLRVGV	8	Unmodified	_TNHLRVGV_					0	0	0			REV__ENST00000263026.9_1_16:22296162-22296357:+|nuORF	REV__ENST00000263026.9_1_16:22296162-22296357:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.25909423828125	2	448.259051	894.503549	0.30626	0.00013729	-0.27451	-0.00012305	0.031752	1.4233E-05	448.2588270898945	89.76	2.8105	90.21	89.202	92.013	0.45058					113	70	4	0	0	0	0.86288	1	10608	10608		26.796	0	1	1731800	+		58709	24438	39201	39217	66547	66547					0.05207740194430244
TNICEANRQ	9	Unmodified	_TNICEANRQ_					0	0	0			REV__ENSG00000166147|ENST00000316623|FBN1	REV__ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.7431030273438	2	524.745647	1047.47674	0.14982	7.8618E-05	-3.6583	-0.0019197	-3.5085	-0.0018411	524.7437165379287	25.809	0.79892	25.768	25.295	26.094	-0.041168					35	21	2	0	0	0	0.77244	1	1123	1123		32.812	2.4947	1	42596	+		58710	21256	39202	39218	66548	66548					-0.04509736479099047
TNIPKDVPRIL	11	Unmodified	_TNIPKDVPRIL_					0	0	0			REV__nc|ENSG00000073008|P15151-3|PVR	REV__nc|ENSG00000073008|P15151-3|PVR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.8883666992188	2	633.382437	1264.75032	1.3848	0.00087709	3.182	0.0020154	4.5668	0.0028925	633.3842375425138	51.028	1.3794	51.063	50.434	51.813	0.034588					70	42	3	0	0	0	0.70278	1	4049	4049		21.686	0	1	117580	+		58711	16664	39203	39219	66549	66549					0.12853609902640528
TNKHTQWYYFQ	11	Unmodified	_TNKHTQWYYFQ_					0	0	0		nc|ENSG00000146856|Q8NEM8|AGBL3;ENSG00000146856|ENST00000436302|AGBL3;nc|ENSG00000146856|Q8NEM8-2|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	nc|ENSG00000146856|Q8NEM8|AGBL3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.9060363769531	3	505.905364	1514.69426	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.22	1	109.31	108.81	109.81	0.090057								0	0	0	0.56276	1	13295	13295		8.4073	2.0864	1				58712	14977	39204	39220	66550	66550					-0.042496430048004186
TNKLFGMIYY	10	Unmodified	_TNKLFGMIYY_					0	0	0			REV__ENST00000216416.8_1_14:54893495-54893558:-|nuORF	REV__ENST00000216416.8_1_14:54893495-54893558:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	624.3325805664062	2	625.317917	1248.62128	0.91106	0.0005697	2.0735	0.0012966	2.9845	0.0018663	625.3193218213112	62.745	1.4363	63.3	62.863	64.3	0.5545					64	33	3	0	0	0	0.37624	1	6884	6884		31.53	0	1	435100	+		58713	24133	39205	39221	66551	66551					0.0069151194823007245
TNKLLTVS	8	Unmodified	_TNKLLTVS_					0	0	0		ENSG00000165195|ENST00000333590|PIGA	ENSG00000165195|ENST00000333590|PIGA	ENSG00000165195|ENST00000333590|PIGA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2628479003906	2	438.263468	874.512382	-1.8646	-0.00081717	1.0768	0.00047194	-0.78773	-0.00034523	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.89494	1	2752	2752		37.159	6.6555	1	3384400			58714	6060	39206	39222	66552	66552					0.07010669040244011
TNKLLTVS	8	Unmodified	_TNKLLTVS_					0	0	0		ENSG00000165195|ENST00000333590|PIGA	ENSG00000165195|ENST00000333590|PIGA	ENSG00000165195|ENST00000333590|PIGA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.263427734375	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.8347	1	2715	2715		23.042	2.5607	1	3673500			58715	6060	39206	39222	66553	66553					0.07010669040244011
TNKLLTVS	8	Unmodified	_TNKLLTVS_					0	0	0		ENSG00000165195|ENST00000333590|PIGA	ENSG00000165195|ENST00000333590|PIGA	ENSG00000165195|ENST00000333590|PIGA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2628173828125	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.82658	1	2085	2085		21.96	1.4781	1	11160000			58716	6060	39206	39222	66554	66554					0.07010669040244011
TNKLLTVS	8	Unmodified	_TNKLLTVS_					0	0	0		ENSG00000165195|ENST00000333590|PIGA	ENSG00000165195|ENST00000333590|PIGA	ENSG00000165195|ENST00000333590|PIGA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2622985839844	2	438.263468	874.512382	0.60069	0.00026326	-0.33608	-0.00014729	0.26461	0.00011597	438.263210874223	57.843	1.7031	58.396	57.682	59.385	0.55323					87	41	3	0	0	0	0.87064	1	6033	6033		29.15	2.3535	1	1743700			58717	6060	39206	39222	66555	66555					0.07010669040244011
TNKQTLRKPLP	11	Unmodified	_TNKQTLRKPLP_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|24|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|24|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|24|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.5977478027344	3	432.597983	1294.77212	-0.16962	-7.3379E-05	-0.60975	-0.00026378	-0.77937	-0.00033715	432.5976970384716	106.55	1.2774	106.52	105.86	107.13	-0.025146					98	24	5	0	0	0	0.74763	1	11566	11566		15.337	0	1	15884000			58718	14507	39207	39223	66556	66556					0.13652414651232903
TNKQTLRKPLP	11	Unmodified	_TNKQTLRKPLP_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|24|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|24|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|24|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.59765625	3	432.597983	1294.77212	2.4108	0.0010429	-2.4605	-0.0010644	-0.04966	-2.1483E-05	432.5968710757986	107.1	1.2973	107.13	106.67	107.97	0.035622					60	30	2	0	0	0	0.75906	1	11712	11712		23.514	1.7339	1	18390000			58719	14507	39207	39223	66557	66557					0.13652414651232903
TNLHVKLRSVV	11	Unmodified	_TNLHVKLRSVV_					0	0	0		ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	ENSG00000108021|ENST00000695737|TASOR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	633.891845703125	2	633.388054	1264.76155	-0.16034	-0.00010155	-4.169	-0.0026406	-4.3293	-0.0027421	633.3853861154565	57.138	1.3537	57.109	56.711	58.065	-0.02866					59	39	2	0	0	0	0.75779	1	5288	5288		22.58	12.874	1	143780			58720	2388	39208	39224	66558	66558					0.13976431996775318
TNLLAALH	8	Unmodified	_TNLLAALH_					0	0	0		nc|ENSG00000163354|Q5T1A1-2|DCST2;ENSG00000163354|ENST00000368424|DCST2	nc|ENSG00000163354|Q5T1A1-2|DCST2	nc|ENSG00000163354|Q5T1A1-2|DCST2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.3025817871094	2	426.750527	851.486502	0.47166	0.00020128	2.8433	0.0012134	3.3149	0.0014146	426.75027430006065	71.695	0.21706	71.825	71.684	71.901	0.1301					14	9	2	0	0	0	0.4196	1	6538	6538		26.796	0	1	21627			58721	5786	39209	39225	66559	66559					0.054818195886127796
TNLLAALH	8	Unmodified	_TNLLAALH_					0	0	0		nc|ENSG00000163354|Q5T1A1-2|DCST2;ENSG00000163354|ENST00000368424|DCST2	nc|ENSG00000163354|Q5T1A1-2|DCST2	nc|ENSG00000163354|Q5T1A1-2|DCST2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.29498291015625	2	426.750527	851.486502	-0.82389	-0.0003516	0.20167	8.6063E-05	-0.62222	-0.00026553	426.7503440505572	72.633	1.4042	73.019	72.209	73.613	0.38581					58	33	2	0	0	0	0.4196	1	8099	8099		65.803	0	1	140330			58722	5786	39209	39225	66560	66560					0.054818195886127796
TNLLSVRTK	9	Unmodified	_TNLLSVRTK_					0	0	0			REV__ENST00000409714.7_1_2:170460711-170470975:+|nuORF	REV__ENST00000409714.7_1_2:170460711-170470975:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3132934570312	2	516.314023	1030.61349	0.81864	0.00042267	-0.69207	-0.00035732	0.12657	6.535E-05	516.3135947493408	102.18	1.1683	102.31	101.93	103.1	0.13523					75	28	3	0	0	0	0.75725	1	10807	10807		36.447	4.9169	1	1280900	+		58723	26353	39210	39226	66561	66561					0.09941120742928433
TNLLTKCVDLP	11	Unmodified	_TNLLTKCVDLP_					0	0	0			REV__ENSG00000155287|ENST00000370495|SLC25A28	REV__ENSG00000155287|ENST00000370495|SLC25A28	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.8377685546875	2	608.833931	1215.65331	3.145	0.0019148	1.8963	0.0011545	5.0413	0.0030693	608.8349484484327	110.59	1.437	110.57	110.28	111.71	-0.027641					106	45	4	0	0	0	0.74763	1	12272	12272		22.58	0.89391	1	3029200	+		58724	20421	39211	39227	66562	66562					0.05410879631335774
TNLQKRLRRKD	11	Unmodified	_TNLQKRLRRKD_					0	0	0		ENSG00000236637|ENST00000421715|IFNA4;ENSG00000228083|ENST00000380222|IFNA14;ENSG00000186803|ENST00000357374|IFNA10	ENSG00000236637|ENST00000421715|IFNA4	ENSG00000236637|ENST00000421715|IFNA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62384033203125	3	476.623303	1426.84808	-1.6911	-0.000806	2.5351	0.0012083	0.84407	0.0004023	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.76892	3	12168	12113;12168;12928		17.833	3.7471	1	2577100			58725	7819	39212	39228	66563;66564;66565	66564					0.15172811551337873
TNNAQNGH	8	Unmodified	_TNNAQNGH_					0	0	0		nc|ENSG00000170921|Q9HCD6|TANC2;nc|ENSG00000170921|Q9HCD6-2|TANC2;ENSG00000170921|ENST00000689528|TANC2	nc|ENSG00000170921|Q9HCD6|TANC2	nc|ENSG00000170921|Q9HCD6|TANC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.19012451171875	2	428.188823	854.363092	0.13282	5.6873E-05	-0.010794	-4.6218E-06	0.12203	5.2252E-05	428.18872922690895	94.107	1.8536	94.542	93.224	95.077	0.43539					86	46	2	0	0	0	0.90465	1	11233	11233		40.573	0	1	1237400			58726	6624	39213	39229	66566	66566					-0.06991463529811881
TNNLRPKKKVK	11	Unmodified	_TNNLRPKKKVK_					0	0	0		ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.6174621582031	3	442.617377	1324.8303	0.50752	0.00022464	-0.46945	-0.00020779	0.03807	1.685E-05	442.6171437102283	16.428	0.36613	15.829	15.694	16.06	-0.59873					15	7	3	0	0	0	0.73647	1	129	129		25.068	1.6899	1	158580			58727	8691	39214	39230	66567	66567					0.18088096296469303
TNNLRPKKKVK	11	Unmodified	_TNNLRPKKKVK_					0	0	0		ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	442.617377	1324.8303	-2.1646	-0.0009581	2.3887	0.0010573	0.22407	9.9176E-05	442.61821686255166	16.175	0.27369	16.175	16.046	16.319	0	0.11121	0.0027187	NaN	25.068	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123390			58728	8691	39214	39230							0.18088096296469303
TNNLRPKKKVK	11	Unmodified	_TNNLRPKKKVK_					0	0	0		ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	442.617377	1324.8303	0.94533	0.00041842	-0.79978	-0.000354	0.14555	6.4422E-05	442.61676201857506	15.902	0.22546	15.98	15.86	16.085	0.077959	-0.083804	-0.0015152	NaN	25.068	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20273			58729	8691	39214	39230							0.18088096296469303
TNNLRPKKKVK	11	Unmodified	_TNNLRPKKKVK_					0	0	0		ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	442.617377	1324.8303	1.5756	0.00069739	-2.3605	-0.0010448	-0.78494	-0.00034743	442.61624417685283	16.19	0.4008	16.106	15.868	16.269	-0.083363	0.042712	-0.0035876	NaN	25.068	32	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48969			58730	8691	39214	39230							0.18088096296469303
TNNLRPKKKVK	11	Unmodified	_TNNLRPKKKVK_					0	0	0		ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	442.617377	1324.8303	-1.5272	-0.00067598	1.0452	0.0004626	-0.48209	-0.00021338	442.61773741060756	16.088	0.1948	16.136	16.008	16.203	0.047802	0.072314	0.00093465	NaN	25.068	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112380			58731	8691	39214	39230							0.18088096296469303
TNNLRPKKKVK	11	Unmodified	_TNNLRPKKKVK_					0	0	0		ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	442.617377	1324.8303	0.022455	9.9392E-06	-1.3728	-0.00060762	-1.3503	-0.00059768	442.61630914126357	16.137	0.17093	16.197	16.084	16.255	0.059269	0.13292	-0.002276	NaN	25.068	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199660			58732	8691	39214	39230							0.18088096296469303
TNNLRPKKKVK	11	Unmodified	_TNNLRPKKKVK_					0	0	0		ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	442.617377	1324.8303	0.58624	0.00025948	-0.52222	-0.00023115	0.064015	2.8334E-05	442.61712122158457	16.175	0.22229	16.151	16.025	16.248	-0.024035	0.087027	-0.0011466	NaN	25.068	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125720			58733	8691	39214	39230							0.18088096296469303
TNNLRPKKKVK	11	Unmodified	_TNNLRPKKKVK_					0	0	0		ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	ENSG00000221983|ENST00000442744|UBA52	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	442.617377	1324.8303	0.043873	1.9419E-05	0.14131	6.2548E-05	0.18519	8.1967E-05	442.61725664228896	16.423	0.3677	15.936	15.821	16.189	-0.48718	-0.12782	-0.00026552	NaN	25.068	17	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	169690			58734	8691	39214	39230							0.18088096296469303
TNPKEPDRI	9	Unmodified	_TNPKEPDRI_					0	0	0			REV__nc|ENSG00000166797|Q9H5X1-2|CIAO2A	REV__nc|ENSG00000166797|Q9H5X1-2|CIAO2A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.815185546875	2	535.285463	1068.55637	-0.073888	-3.9551E-05	1.69	0.00090463	1.6161	0.00086508	535.2863906514916	99.36	2.6161	99.41	97.749	100.37	0.04982					75	60	2	0	0	0	0.20789	1	10555	10555		19.997	0.89325	1	162110	+		58735	21319	39215	39231	66568	66568					0.024836534665837462
TNQIAKLRKM	10	Unmodified	_TNQIAKLRKM_					0	0	0			REV__ENSG00000185958|ENST00000327337|FAM186A	REV__ENSG00000185958|ENST00000327337|FAM186A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.8580932617188	2	601.855532	1201.69651	-0.51505	-0.00030999	4.0494	0.0024371	3.5343	0.0021271	601.8578575542072	103.62	2.2032	103.62	103.26	105.47	-0.0035706					116	52	4	0	0	0	0.85466	2	11154	11142;11154		25.574	2.9944	1	1418100	+		58736	22813	39216	39232	66569;66570	66570					0.10373114199296651
TNQIAKLRKM	10	Unmodified	_TNQIAKLRKM_					0	0	0			REV__ENSG00000185958|ENST00000327337|FAM186A	REV__ENSG00000185958|ENST00000327337|FAM186A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.8587646484375	2	601.855532	1201.69651	-0.24099	-0.00014504	3.8407	0.0023115	3.5997	0.0021665	601.8577844533773	103.4	2.3202	103.45	103.07	105.39	0.041481					122	55	4	0	0	0	0.86718	1	11240	11240		27.882	0.83493	1	1412200	+		58737	22813	39216	39232	66571	66571					0.10373114199296651
TNQVMRKKLIL	11	Unmodified	_TNQVMRKKLIL_					0	0	0		nc|ENSG00000141027|O75376-2|NCOR1;ENSG00000141027|ENST00000268712|NCOR1;nc|ENSG00000141027|O75376-3|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.6083679199219	3	448.611235	1342.81188	-1.2776	-0.00057316	-2.9232	-0.0013114	-4.2008	-0.0018845	448.94413867923083	73.921	0.80068	74.309	73.983	74.784	0.38779					42	19	3	0	0	0	0.72374	1	8317	8317		27.644	2.5761	1	382160			58738	4476	39217	39233	66572	66572					0.15418218330319178
TNQVMRKKLIL	11	Unmodified	_TNQVMRKKLIL_					0	0	0		nc|ENSG00000141027|O75376-2|NCOR1;ENSG00000141027|ENST00000268712|NCOR1;nc|ENSG00000141027|O75376-3|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	448.611235	1342.81188	0.084457	3.7888E-05	-4.138	-0.0018563	-4.0535	-0.0018184	448.60913483432006	73.676	0.79001	74.235	74.05	74.84	0.55891	-0.036981	-0.0011382	NaN	27.644	42	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	415610			58739	4476	39217	39233							0.15418218330319178
TNRASGGH	8	Unmodified	_TNRASGGH_					0	0	0		L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.19671630859375	2	400.193908	798.373263	0.51059	0.00020433	3.3623	0.0013456	3.8729	0.0015499	400.1955363705816	82.964	1.6149	82.898	82.456	84.071	-0.066185					89	37	4	0	0	0	0.89494	4	8455	8408;8444;8455;8466		55.504	7.5886	1	4296700			58740	14606	39218	39234	66573;66574;66575;66576	66575					-0.033988558045621176
TNRASGGH	8	Unmodified	_TNRASGGH_					0	0	0		L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.1969909667969	2	400.193908	798.373263	0.91791	0.00036734	2.5215	0.0010091	3.4394	0.0013764	400.1951514766141	86.536	1.7122	86.462	86.013	87.725	-0.073769					84	39	4	0	0	0	0.88601	1	8959	8959		34.173	0.65696	1	3325200			58741	14606	39218	39234	66577	66577					-0.033988558045621176
TNRASGGH	8	Unmodified	_TNRASGGH_					0	0	0		L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.1965026855469	2	400.193908	798.373263	2.7375	0.0010955	0.48716	0.00019496	3.2247	0.0012905	400.19430392281004	82.738	1.2461	82.797	82.427	83.673	0.059166					65	28	4	0	0	0	0.87064	1	8322	8322		29.15	0	1	4511800			58742	14606	39218	39234	66578	66578					-0.033988558045621176
TNRASGGH	8	Unmodified	_TNRASGGH_					0	0	0		L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.1965026855469	2	400.193908	798.373263	2.9562	0.001183	1.6178	0.00064742	4.5739	0.0018305	400.19504393030127	86.25	1.3268	86.305	85.975	87.302	0.055641					56	30	3	0	0	0	0.90465	1	8790	8790		40.573	3.4135	1	2395800			58743	14606	39218	39234	66579	66579					-0.033988558045621176
TNRASGGH	8	Unmodified	_TNRASGGH_					0	0	0		L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.1965637207031	2	400.193908	798.373263	0.56967	0.00022798	2.9209	0.0011689	3.4905	0.0013969	400.1953507719879	82.54	1.3237	82.686	82.288	83.611	0.1455					67	30	3	0	0	0	0.90465	3	7933	7933;7942;7991		40.573	3.4135	1	6052300			58744	14606	39218	39234	66580;66581;66582	66580					-0.033988558045621176
TNRASGGH	8	Unmodified	_TNRASGGH_					0	0	0		L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	L1MEf_dup11696|chr22:19793158-19794011:+|4.389300335459326|0.4439510689387073|3.31|63.0|4|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.1959533691406	2	400.193908	798.373263	1.0095	0.00040398	2.1539	0.00086197	3.1633	0.0012659	400.19508038720977	81.709	1.4923	82.135	81.837	83.33	0.42646					93	36	4	0	0	0	0.91977	1	9451	9451		45.952	0	1	32993000			58745	14606	39218	39234	66583	66583					-0.033988558045621176
TNRILFVLG	9	Unmodified	_TNRILFVLG_					0	0	0			REV__ENSG00000127329|ENST00000334414|PTPRB	REV__ENSG00000127329|ENST00000334414|PTPRB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.8148803710938	2	516.813659	1031.61277	-1.6019	-0.0008279	2.7318	0.0014118	1.1299	0.00058395	516.8149522699644	36.404	1.2683	36.404	35.643	36.911	0					58	30	4	0	0	0	0.7932	1	2106	2106		20.947	0.95016	1	66622	+		58746	18728	39219	39235	66584	66584					0.09822326093899392
TNRLLTLPERL	11	Unmodified	_TNRLLTLPERL_					0	0	0		ENST00000559774.6_1_15:99874138-99895656:+|nuORF;ENST00000558248.5_1_15:99860885-99892677:+|nuORF;ENST00000558890.5_1_15:99872165-99903471:+|nuORF;nc|ENSG00000168904|Q86X40-3|LRRC28;nc|ENSG00000168904|Q86X40-2|LRRC28;ENSG00000168904|ENST00000301981|LRRC28	ENST00000559774.6_1_15:99874138-99895656:+|nuORF	ENST00000559774.6_1_15:99874138-99895656:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.6011047363281	3	442.601504	1324.78268	-0.96202	-0.00042579	0.15349	6.7935E-05	-0.80853	-0.00035786	442.60138371478644	103.97	1.3087	103.97	103.68	104.99	0					72	32	4	0	0	0	0.77511	1	10712	10712		16.53	0	1	296460			58747	6446	39220	39236	66585	66585					0.1332839730566775
TNRLVLLGRNL	11	Unmodified	_TNRLVLLGRNL_					0	0	0		ENST00000487575.6_1_9:121469-150531:-|nuORF;ENST00000479583.5_1_2:114228547-114253317:+|nuORF;ENST00000456188.5_1_2:114214762-114253317:+|nuORF;nc|ENSG00000172785|Q9BRT8-2|ZNG1A;ENST00000358604.7_1_2:114196636-114253317:+|nuORF;nc|ENSG00000172785|Q9BRT8-3|ZNG1A;ENSG00000172785|ENST00000356521|ZNG1A;ENSG00000136682|ENST00000259199|ZNG1B	ENST00000487575.6_1_9:121469-150531:-|nuORF	ENST00000487575.6_1_9:121469-150531:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	423.5976257324219	3	423.598094	1267.77245	-0.96194	-0.00040747	0.13168	5.5777E-05	-0.83026	-0.0003517	423.59805160624353	105.99	2.401	105.99	105.33	107.73	0					158	55	4	0	0	0	0.7434	1	10995	10995		21.032	0	1	1845700			58748	4126	39221	39237	66586	66586					0.14927834371110293
TNRVKERKRKR	11	Unmodified	_TNRVKERKRKR_					0	0	0		ENSG00000128908|ENST00000648947|INO80	ENSG00000128908|ENST00000648947|INO80	ENSG00000128908|ENST00000648947|INO80	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7949523925781	3	490.974447	1469.90151	-1.4116	-0.00069308	-1.6515	-0.00081086	-3.0632	-0.0015039	491.307894889065	44.242	0.27998	45.086	44.904	45.184	0.84438					9	6	2	0	0	0	0.18209	1	4037	4037		7.6794	6.4475	1	154410			58749	3566	39222	39238	66587	66587					0.18535609053856206
TNTAVPVRPNI	11	Unmodified	_TNTAVPVRPNI_					0	0	0			REV__ENST00000379887.8_2_15:72877639-72878143:+|nuORF	REV__ENST00000379887.8_2_15:72877639-72878143:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	591.8392944335938	2	591.335487	1180.65642	0.77811	0.00046012	2.7973	0.0016542	3.5755	0.0021143	591.3368886778635	79.503	1.1585	79.447	78.675	79.834	-0.056503					61	32	3	0	0	0	0.6493	1	7959	7959		38.754	0	1	343670	+		58750	25930	39223	39239	66588	66588					0.07331890800401197
TNTGVNCV	8	Unmodified	_TNTGVNCV_					0	0	0		ENST00000529978.1_1_8:12870155-12879550:+|nuORF;ENSG00000250305|ENST00000524591|TRMT9B	ENST00000529978.1_1_8:12870155-12879550:+|nuORF	ENST00000529978.1_1_8:12870155-12879550:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5751037597656	2	404.186903	806.359253	-1.8218	-0.00073634	3.9564	0.0015991	2.1347	0.0008628	404.1889542889344	84.111	1.9739	84.284	83.675	85.649	0.17345					104	45	3	0	0	0	0.4196	1	8109	8109		40.778	0	1	160340			58751	8844	39224	39240	66589	66589					-0.051672693478849396
TPAARAALC	9	Unmodified	_TPAARAALC_					0	0	0		ENST00000395057.5_2_3:51705404-51708292:+|nuORF	ENST00000395057.5_2_3:51705404-51708292:+|nuORF	ENST00000395057.5_2_3:51705404-51708292:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.23321533203125	2	437.234187	872.453822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.367	1	17.285	16.785	17.785	-0.0821								0	0	0	0.28772	1	226	226		35.618	6.4687	1				58752	11086	39225	39241	66590	66590					0.012492891940951267
TPACLLPSIL	10	Unmodified	_TPACLLPSIL_					0	0	0			REV__ENST00000476805.2_1_2:64977516-64977744:-|nuORF	REV__ENST00000476805.2_1_2:64977516-64977744:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.2985229492188	2	514.296453	1026.57835	-1.5684	-0.00080663	4.4746	0.0023013	2.9062	0.0014947	514.2990007980452	96.402	2.2846	96.604	95.027	97.312	0.20242					111	53	3	0	0	0	0.6116	1	9844	9844		49.442	6.5773	1	524360	+		58753	27342	39226	39242	66591	66591					0.06612741890762663
TPADMRRG	8	Unmodified	_TPADMRRG_					0	0	0			REV__nc|ENSG00000211454|Q8NHP1-3|AKR7L	REV__nc|ENSG00000211454|Q8NHP1-3|AKR7L	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.94830322265625	2	452.226894	902.439234	1.2053	0.00054505	1.5307	0.00069221	2.7359	0.0012373	452.2274726339463	107.15	0.88579	107.18	106.81	107.69	0.035622					44	20	3	0	0	0	0.4196	1	11790	11790		29.15	3.6994	1	586260	+		58754	20817	39227	39243	66592	66592					-0.015887829540247367
TPAELLIPTD	10	Unmodified	_TPAELLIPTD_					0	0	0			REV__nc|ENSG00000135899|Q9HB58-5|SP110	REV__nc|ENSG00000135899|Q9HB58-5|SP110	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2929077148438	2	535.292422	1068.57029	1.6235	0.00086906	-0.37469	-0.00020057	1.2488	0.00066849	535.2920952224055	26.755	0.67277	26.415	26.186	26.859	-0.34035					29	14	3	0	0	0	0.8608	1	1513	1513		34.173	1.3601	1	225540	+		58755	19261	39228	39244	66593	66593					0.03874886175003667
TPAELLIPTD	10	Unmodified	_TPAELLIPTD_					0	0	0			REV__nc|ENSG00000135899|Q9HB58-5|SP110	REV__nc|ENSG00000135899|Q9HB58-5|SP110	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	535.292422	1068.57029	1.6235	0.00086906	-0.37469	-0.00020057	1.2488	0.00066849	535.2920952224055	26.755	0.67277	26.415	26.186	26.859	-0.34035	-0.09116	-0.0012758	NaN	34.173	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	225540	+		58756	19261	39228	39244							0.03874886175003667
TPAHIAAFGG	10	Unmodified	_TPAHIAAFGG_					0	0	0		ENST00000460846.1_1_13:111557570-111567134:-|nuORF;nc|ENSG00000088448|Q9NXR5-2|ANKRD10;ENSG00000088448|ENST00000267339|ANKRD10	ENST00000460846.1_1_13:111557570-111567134:-|nuORF	ENST00000460846.1_1_13:111557570-111567134:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.243408203125	2	471.245609	940.476666	-0.21882	-0.00010312	-3.6849	-0.0017365	-3.9038	-0.0018396	471.24368623226155	85.627	3.5823	85.685	84.499	88.081	0.057899					161	82	3	0	0	0	0.85934	1	8667	8667		35.618	10.044	1	246480			58757	1590	39229	39245	66594	66594					0.0040463158322836534
TPALLPLP	8	Unmodified	_TPALLPLP_					0	0	0		ENSG00000079432|ENST00000681038|CIC	ENSG00000079432|ENST00000681038|CIC	ENSG00000079432|ENST00000681038|CIC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.1756286621094	2	411.260197	820.50584	0.52116	0.00021433	-1.5789	-0.00064933	-1.0577	-0.000435	411.25938360739053	95.802	0.69335	96.207	95.889	96.582	0.40451					26	16	2	0	0	0	0.4196	1	11533	11533		19.36	6.4008	1	91793			58758	1421	39230	39246	66595	66595					0.0884077587951424
TPALTLIPA	9	Unmodified	_TPALTLIPA_					0	0	0		ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2810974121094	2	448.776211	895.537869	-1.3666	-0.00061332	3.3101	0.0014855	1.9434	0.00087216	448.77751735687275	44.821	1.5883	44.833	43.806	45.395	0.012058					58	37	2	0	0	0	0.7932	1	3161	3161		23.042	0	1	160140			58759	10449	39231	39247	66596	66596					0.08592143562657384
TPALTLIPA	9	Unmodified	_TPALTLIPA_					0	0	0		ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	448.776211	895.537869	0.16832	7.5539E-05	1.5614	0.00070072	1.7297	0.00077626	448.77677872317554	45.129	1.2584	45.109	44.441	45.699	-0.01973	0.18728	-0.0004946	NaN	23.042	48	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	154080			58760	10449	39231	39247							0.08592143562657384
TPALTLIPA	9	Unmodified	_TPALTLIPA_					0	0	0		ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	448.776211	895.537869	-0.99062	-0.00044457	2.7415	0.0012303	1.7508	0.00078574	448.7772160771289	45.009	1.6233	44.978	43.958	45.581	-0.031063	0.055862	0.00056456	NaN	23.042	55	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164620			58761	10449	39231	39247							0.08592143562657384
TPALTLIPA	9	Unmodified	_TPALTLIPA_					0	0	0		ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	448.776211	895.537869	0.15992	7.1769E-05	1.417	0.00063591	1.5769	0.00070768	448.77660911420537	44.927	1.6209	44.923	44.085	45.706	-0.0041618	0.00071791	-0.00062423	NaN	23.042	69	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138940			58762	10449	39231	39247							0.08592143562657384
TPALTLIPA	9	Unmodified	_TPALTLIPA_					0	0	0		ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	448.776211	895.537869	0.24659	0.00011066	1.9097	0.00085702	2.1563	0.00096768	448.7768904901673	44.718	1.6105	44.767	43.959	45.569	0.048996	-0.15505	-0.00018202	NaN	23.042	60	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142520			58763	10449	39231	39247							0.08592143562657384
TPAPGPAHG	9	Unmodified	_TPAPGPAHG_					0	0	0		nc|ENSG00000188199|A6NNL0-2|NUTM2B;nc|ENSG00000184923|Q8IVF1-2|NUTM2A;ENSG00000214562|ENST00000381697|NUTM2D;ENSG00000228570|ENST00000429984|NUTM2E;ENSG00000188199|ENST00000429828|NUTM2B;ENSG00000184923|ENST00000381707|NUTM2A	nc|ENSG00000188199|A6NNL0-2|NUTM2B	nc|ENSG00000188199|A6NNL0-2|NUTM2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.7044677734375	2	402.703577	803.392602	2.8107	0.0011319	-2.4942	-0.0010044	0.31649	0.00012745	402.7025728416904	25.135	0.51849	25.098	24.93	25.448	-0.037178					23	14	2	0	0	0	0.7932	1	984	984		23.042	2.0956	1	42731			58764	7655	39232	39248	66597	66597					-0.016958995136633348
TPAPLETRGI	10	Unmodified	_TPAPLETRGI_					0	0	0		ENST00000470336.5_1_3:100469341-100565327:-|nuORF	ENST00000470336.5_1_3:100469341-100565327:-|nuORF	ENST00000470336.5_1_3:100469341-100565327:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3103637695312	2	527.798206	1053.58186	0.15008	7.9212E-05	4.1827	0.0022076	4.3328	0.0022869	527.7988597736962	79.144	0.50959	79.694	79.318	79.828	0.54945					12	11	2	0	0	0	0.37624	1	9091	9091		39.253	16.21	1	39784			58765	12218	39233	39249	66598	66598					0.05721127988999797
TPAPQPHG	8	Unmodified	_TPAPQPHG_					0	0	0		ENST00000377264.7_2_11:64669793-64670087:-|nuORF;ENST00000418259.5_2_11:64669793-64670087:-|nuORF	ENST00000377264.7_2_11:64669793-64670087:-|nuORF	ENST00000377264.7_2_11:64669793-64670087:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.7037353515625	2	402.703577	803.392602	-0.36836	-0.00014834	1.0574	0.00042581	0.68901	0.00027747	402.70395527880777	25.237	0.74186	25.196	24.803	25.545	-0.041168					28	19	2	0	0	0	0.89962	1	1047	1047		38.806	5.2906	1	52623			58766	10832	39234	39250	66599	66599					-0.016958995136633348
TPAQRGKVPPV	11	Unmodified	_TPAQRGKVPPV_					0	0	0		nc|ENSG00000162894|O60667-2|FCMR;nc|ENSG00000162894|O60667-3|FCMR;ENSG00000162894|ENST00000367091|FCMR	nc|ENSG00000162894|O60667-2|FCMR	nc|ENSG00000162894|O60667-2|FCMR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3401489257812	2	575.340572	1148.66659	-0.95443	-0.00054912	1.0023	0.00057665	0.047846	2.7528E-05	575.3409602555264	38.845	0.98347	38.797	38.42	39.404	-0.047005					49	22	3	0	0	0	0.37012	1	2752	2752		61.691	12.25	1	284350			58767	5746	39235	39251	66600	66600					0.09820498525618859
TPARLRTIVQR	11	Unmodified	_TPARLRTIVQR_					0	0	0		ENST00000399868.2_1_10:6372923-6373228:+|nuORF	ENST00000399868.2_1_10:6372923-6373228:+|nuORF	ENST00000399868.2_1_10:6372923-6373228:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.6047058105469	3	437.60536	1309.79425	1.8914	0.00082769	-4.0683	-0.0017803	-2.1769	-0.00095263	437.6035505341338	16.082	0.26723	15.999	15.868	16.135	-0.083364					18	11	2	0	0	0	0.75121	1	107	107		21.78	2.5177	1	95033			58768	11215	39236	39252	66601	66601					0.15174639119641142
TPARRRLLCPL	11	Unmodified	_TPARRRLLCPL_					0	0	0		ENSG00000165188|ENST00000489339|RNF183	ENSG00000165188|ENST00000489339|RNF183	ENSG00000165188|ENST00000489339|RNF183	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3925170898438	2	648.390074	1294.76559	0.024154	1.5661E-05	4.4267	0.0028702	4.4508	0.0028859	648.3928433509174	107.73	1.0319	107.73	106.84	107.87	0					93	24	4	0	0	0	0.7342	1	11096	11096		25.574	0	1	35129000			58769	6058	39237	39253	66602	66602					0.13000198218878722
TPASGSDTLIL	11	Unmodified	_TPASGSDTLIL_					0	0	0			REV__nc|ENSG00000125386|P78312|FAM193A	REV__nc|ENSG00000125386|P78312|FAM193A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.7907104492188	2	537.787504	1073.56045	-0.36611	-0.00019689	-0.56969	-0.00030637	-0.9358	-0.00050326	537.7872818340479	64.788	0.4695	65.342	65.102	65.571	0.55386					16	11	2	0	0	0	0.70737	1	7039	7039		30.318	1.1682	1	88621	+		58770	29823	39238	39254	66603	66603					0.026616981696406583
TPASRKRKIGP	11	Unmodified	_TPASRKRKIGP_					0	0	0			REV__nc|ENSG00000135636|O75923-3|DYSF	REV__nc|ENSG00000135636|O75923-3|DYSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	605.8720703125	2	605.872571	1209.73059	0.90131	0.00054608	-1.6366	-0.00099159	-0.73532	-0.00044551	605.871436730015	100.15	1.5268	100.3	99.851	101.38	0.15073					77	35	3	0	0	0	0.7434	1	10504	10504		23.523	0	1	806450	+		58771	29867	39239	39255	66604	66604					0.13411278682542616
TPATQALRTG	10	Unmodified	_TPATQALRTG_					0	0	0		ENST00000218004.5_1_X:108779178-108780191:+|nuORF	ENST00000218004.5_1_X:108779178-108780191:+|nuORF	ENST00000218004.5_1_X:108779178-108780191:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2799377441406	2	508.28018	1014.54581	-1.5862	-0.00080625	1.6452	0.00083622	0.058951	2.9964E-05	508.2809273544912	88.323	3.8901	88.493	87.177	91.067	0.16922					285	91	4	0	0	0	0.67571	1	8704	8704		45.972	7.2186	1	1814000			58772	9153	39240	39256	66605	66605					0.039116708121468946
TPAVSDYS	8	Unmodified	_TPAVSDYS_					0	0	0		ENST00000568782.1_1_15:43295571-43307995:-|nuORF;ENSG00000159459|ENST00000290650|UBR1	ENST00000568782.1_1_15:43295571-43307995:-|nuORF	ENST00000568782.1_1_15:43295571-43307995:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1905822753906	2	420.192708	838.370863	-0.017504	-7.3551E-06	-3.0933	-0.0012998	-3.1109	-0.0013072	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.92973	1	11259	11259		50.025	0	1	4147200			58773	5532	39241	39257	66606	66606					-0.05478749052895182
TPCRLPPPAP	10	Unmodified	_TPCRLPPPAP_					0	0	0		ENSG00000169926|ENST00000307145|KLF13	ENSG00000169926|ENST00000307145|KLF13	ENSG00000169926|ENST00000307145|KLF13	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.3203735351562	2	524.784044	1047.55354	-0.33813	-0.00017744	-2.7834	-0.0014607	-3.1216	-0.0016381	525.2842347545304	54.374	0.38431	54.325	54.07	54.454	-0.049274					17	11	2	0	0	0	0.37624	1	4503	4503		35.618	6.4687	1	67815			58774	6543	39242	39258	66607	66607					0.031661068080666155
TPCRLPPPAP	10	Unmodified	_TPCRLPPPAP_					0	0	0		ENSG00000169926|ENST00000307145|KLF13	ENSG00000169926|ENST00000307145|KLF13	ENSG00000169926|ENST00000307145|KLF13	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	524.784044	1047.55354	0.15343	8.0516E-05	-3.128	-0.0016415	-2.9746	-0.001561	524.7819319791219	54.377	0.4807	54.404	54.109	54.59	0.027035	0.0004578	0.00071406	NaN	26.693	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103450			58775	6543	39242	39258							0.031661068080666155
TPCRLPPPAP	10	Unmodified	_TPCRLPPPAP_					0	0	0		ENSG00000169926|ENST00000307145|KLF13	ENSG00000169926|ENST00000307145|KLF13	ENSG00000169926|ENST00000307145|KLF13	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	524.784044	1047.55354	0.95086	0.00049899	-7.6657	-0.0040228	-6.7148	-0.0035238	524.7808301309317	54.076	0.29628	54.483	54.319	54.615	0.40663	0.078904	-0.0040486	NaN	26.693	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86180			58776	6543	39242	39258							0.031661068080666155
TPDAVMGNPK	10	Unmodified	_TPDAVMGNPK_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	515.2555541992188	2	515.255317	1028.49608	0.16142	8.3175E-05	-0.68701	-0.00035398	-0.52558	-0.00027081	515.2547919450197	32.349	0.61575	32.36	32.112	32.727	0.010899					32	18	2	0	0	0	0.40664	3	1806	1797;1806;1816		63.534	30.721	1	91870			58777	8826	39243	39259	66608;66609;66610	66609					-0.01702780188156794
TPDAVMGNPK	10	Unmodified	_TPDAVMGNPK_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	515.255317	1028.49608	0.036898	1.9012E-05	-0.46592	-0.00024007	-0.42902	-0.00022106	515.2548639504554	32.554	0.74892	32.5	32.151	32.9	-0.05434	0.11682	-0.0001033	NaN	63.534	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122900			58778	8826	39243	39259							-0.01702780188156794
TPDAVMGNPK	10	Unmodified	_TPDAVMGNPK_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	515.255317	1028.49608	-0.19052	-9.8165E-05	0.25674	0.00013229	0.066227	3.4124E-05	515.2550173882923	32.339	0.69453	32.333	32.087	32.782	-0.0061493	-0.050226	0.00064142	NaN	63.534	33	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120280			58779	8826	39243	39259							-0.01702780188156794
TPDAVMGNPK	10	Unmodified	_TPDAVMGNPK_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	515.255317	1028.49608	0.41433	0.00021349	-1.1753	-0.0006056	-0.76101	-0.00039212	515.2540093778705	32.372	0.080685	32.339	32.279	32.36	-0.032677	-0.043885	-0.00083437	NaN	63.534	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33840			58780	8826	39243	39259							-0.01702780188156794
TPDEIDHVF	9	Unmodified	_TPDEIDHVF_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.7509155273438	2	536.750921	1071.48729	-1.1901	-0.00063877	1.0005	0.00053701	-0.18959	-0.00010176	536.751360036762	57.521	1.0337	57.915	57.535	58.568	0.39407					63	25	4	0	0	0	0.0018778	5	5987	5962;5973;5987;5999;6011		143.02	82.047	1	2528700			58781	6838	39244	39260	66611;66612;66613;66614;66615	66613					-0.04559430552990307
TPDEIDHVF	9	Unmodified	_TPDEIDHVF_					0	0	0		nc|ENSG00000173193|Q460N5-4|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-4|PARP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7511596679688	2	536.750921	1071.48729	0.15067	8.0871E-05	-0.28128	-0.00015098	-0.13062	-7.0109E-05	536.750678070922	57.391	0.91322	57.946	57.601	58.514	0.55512					59	22	3	0	0	0	2.4111E-13	5	5985	5961;5973;5985;5997;6009		167.82	88.112	1	2339100			58782	6838	39244	39260	66616;66617;66618;66619;66620	66618					-0.04559430552990307
TPDIVVAVF	9	Unmodified	_TPDIVVAVF_					0	0	0			REV__ENST00000521386.5_1_8:67958045-67971691:-|nuORF	REV__ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.7713928222656	2	480.773668	959.532783	-2.2365	-0.0010753	-4.1197	-0.0019806	-6.3562	-0.0030559	480.7715917002789	58.982	0.47528	59.016	58.743	59.218	0.033905					23	14	2	0	0	0	0.77546	1	5431	5431		31.955	1.4512	1	61465	+		58783	18441	39245	39261	66621	66621					0.05139839700041193
TPDIVVAVF	9	Unmodified	_TPDIVVAVF_					0	0	0			REV__ENST00000521386.5_1_8:67958045-67971691:-|nuORF	REV__ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	480.773668	959.532783	0.088013	4.2314E-05	-7.0773	-0.0034026	-6.9893	-0.0033603	480.77038532424416	59.075	0.53205	59.045	58.736	59.268	-0.030888	0.014283	-0.00075993	NaN	31.955	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88689	+		58784	18441	39245	39261							0.05139839700041193
TPDIVVAVF	9	Unmodified	_TPDIVVAVF_					0	0	0			REV__ENST00000521386.5_1_8:67958045-67971691:-|nuORF	REV__ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	480.773668	959.532783	-2.2365	-0.0010753	-4.1197	-0.0019806	-6.3562	-0.0030559	480.7715917002789	58.982	0.47528	59.016	58.743	59.218	0.033905	-0.014283	0.002084	NaN	31.955	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61465	+		58785	18441	39245	39261							0.05139839700041193
TPDNALNLFL	10	Unmodified	_TPDNALNLFL_					0	0	0			REV__ENSG00000116039|ENST00000234396|ATP6V1B1	REV__ENSG00000116039|ENST00000234396|ATP6V1B1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	559.797607421875	2	559.298039	1116.58152	0.36789	0.00020576	-4.1987	-0.0023483	-3.8308	-0.0021426	559.2954920588872	94.308	1.7686	94.537	94.199	95.968	0.22863					78	42	2	0	0	0	0.86218	1	9632	9632		32.812	1.1781	1	216030	+		58786	18174	39246	39262	66622	66622					0.027897082691197284
TPDQQTLLH	9	Unmodified	_TPDQQTLLH_					0	0	0		nc|ENSG00000012504|Q96RI1-5|NR1H4;nc|ENSG00000012504|Q96RI1-2|NR1H4;ENSG00000012504|ENST00000392986|NR1H4;nc|ENSG00000012504|Q96RI1-4|NR1H4;nc|ENSG00000012504|Q96RI1|NR1H4	nc|ENSG00000012504|Q96RI1-5|NR1H4	nc|ENSG00000012504|Q96RI1-5|NR1H4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8084106445312	2	526.772188	1051.52982	2.1482	0.0011316	-4.3684	-0.0023012	-2.2202	-0.0011695	526.7696933709334	99.782	0.36374	100.15	99.919	100.28	0.36292					10	8	2	0	0	0	0.20433	1	12090	12090		68.787	5.4806	1	48018			58787	801	39247	39263	66623	66623					0.006119645752505676
TPDTPATMFL	10	Unmodified	_TPDTPATMFL_					0	0	0		ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	ENSG00000164309|ENST00000446378|CMYA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.265869140625	2	547.26535	1092.51615	0.43083	0.00023578	2.1103	0.0011549	2.5411	0.0013907	547.2663369111906	27.918	0.58229	27.879	27.673	28.255	-0.038523					21	12	3	0	0	0	0.86763	1	1361	1361		26.693	2.1737	1	28929			58788	5953	39248	39264	66624	66624					-0.026410292482069053
TPEAAITSL	9	Unmodified	_TPEAAITSL_					0	0	0		nc|ENSG00000082438|Q53SF7-3|COBLL1	nc|ENSG00000082438|Q53SF7-3|COBLL1	nc|ENSG00000082438|Q53SF7-3|COBLL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7450866699219	2	451.745108	901.475663	-0.010196	-4.6062E-06	1.0103	0.0004564	1.0001	0.0004518	451.7456051590094	33.34	1.2132	33.338	32.979	34.193	-0.0016365					54	27	3	0	0	0	0.28875	1	1972	1972		65.803	2.4969	1	302940			58789	14790	39249	39265	66625	66625					0.02098372423665751
TPEEAYRA	8	Unmodified	_TPEEAYRA_					0	0	0		nc|ENSG00000079335|Q9UNH5-4|CDC14A;nc|ENSG00000079335|Q9UNH5-3|CDC14A;ENSG00000079335|ENST00000336454|CDC14A;nc|ENSG00000079335|Q9UNH5-5|CDC14A;nc|ENSG00000079335|Q9UNH5-2|CDC14A	nc|ENSG00000079335|Q9UNH5-4|CDC14A	nc|ENSG00000079335|Q9UNH5-4|CDC14A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7233581542969	2	468.724707	935.43486	-0.58063	-0.00027215	-3.1666	-0.0014842	-3.7472	-0.0017564	468.72346030200146	77.011	2.0488	77.579	77.289	79.337	0.56836					141	50	5	0	0	0	0.87479	1	8869	8869		30.504	2.2494	1	13648000			58790	1418	39250	39266	66626	66626					-0.03543968895951366
TPEEKSAVT	9	Unmodified	_TPEEKSAVT_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.2454833984375	2	481.245472	960.476391	0.38849	0.00018696	-0.36028	-0.00017338	0.028207	1.3575E-05	481.24516301016575	28.416	0.69288	28.452	28.16	28.853	0.03607					51	22	3	0	0	0	0.24527	1	1339	1339		69.628	10.846	1	267010			58791	8826	39251	39267	66627	66627					-0.005428329272717747
TPEEKSAVT	9	Unmodified	_TPEEKSAVT_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2450866699219	2	481.245472	960.476391	-0.99487	-0.00047878	0.93546	0.00045018	-0.059413	-2.8592E-05	481.24577626446245	28.501	1.0301	28.479	28.021	29.051	-0.02207					50	27	3	0	0	0	0.14236	2	1389	1382;1389		85.161	7.9855	1	305280			58792	8826	39251	39267	66628;66629	66629					-0.005428329272717747
TPEEKTYYIEL	11	Unmodified	_TPEEKTYYIEL_					0	0	0		ENSG00000144840|ENST00000273375|RABL3	ENSG00000144840|ENST00000273375|RABL3	ENSG00000144840|ENST00000273375|RABL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.5652160644531	3	462.566014	1384.67621	0.04602	2.1287E-05	-2.5596	-0.001184	-2.5135	-0.0011627	462.56471628765263	36.677	0.70017	36.959	36.638	37.339	0.28173					42	15	4	0	0	0	0.68431	1	2896	2896		34.087	4.8415	1	518160			58793	4736	39252	39268	66630	66630					-0.0007382277017313754
TPEEKTYYIEL	11	Unmodified	_TPEEKTYYIEL_					0	0	0		ENSG00000144840|ENST00000273375|RABL3	ENSG00000144840|ENST00000273375|RABL3	ENSG00000144840|ENST00000273375|RABL3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	462.566014	1384.67621	1.2175	0.00056318	-3.7013	-0.0017121	-2.4838	-0.0011489	462.56416016094676	36.536	0.70455	36.976	36.658	37.363	0.44043	0.0088775	-0.00055965	NaN	34.087	45	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	567310			58794	4736	39252	39268							-0.0007382277017313754
TPEERKKKPQL	11	Unmodified	_TPEERKKKPQL_					0	0	0			REV__nc|ENSG00000089195|Q9UJA5-2|TRMT6	REV__nc|ENSG00000089195|Q9UJA5-2|TRMT6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9322509765625	3	451.933143	1352.7776	0.73764	0.00033337	-1.7723	-0.00080097	-1.0347	-0.00046761	451.932241061631	98.904	2.3627	99.06	97.538	99.901	0.15659					136	54	4	0	0	0	0.76579	1	10265	10265		18.531	0	1	302530	+		58795	16965	39253	39269	66631	66631					0.11532093443042868
TPEERKKKPQL	11	Unmodified	_TPEERKKKPQL_					0	0	0			REV__nc|ENSG00000089195|Q9UJA5-2|TRMT6	REV__nc|ENSG00000089195|Q9UJA5-2|TRMT6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.9329528808594	3	451.933143	1352.7776	0.75363	0.00034059	-1.7779	-0.00080347	-1.0242	-0.00046289	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.7896	1	10599	10599		13.508	0.55046	1	952120	+		58796	16965	39253	39269	66632	66632					0.11532093443042868
TPEEVLKKY	9	Unmodified	_TPEEVLKKY_					0	0	0		nc|ENSG00000110042|Q9Y2E6-2|DTX4;ENSG00000110042|ENST00000227451|DTX4	nc|ENSG00000110042|Q9Y2E6-2|DTX4	nc|ENSG00000110042|Q9Y2E6-2|DTX4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8074951171875	2	553.808239	1105.60193	-0.66564	-0.00036864	0.62911	0.00034841	-0.036522	-2.0226E-05	553.8083797428066	33.72	0.74817	33.723	33.39	34.138	0.0030785					48	17	4	0	0	0	0.44421	1	1982	1982		54.776	8.8244	1	326730			58797	2502	39254	39270	66633	66633					0.05334878928965736
TPEIWPLTY	9	Unmodified	_TPEIWPLTY_					0	0	0		ENST00000312960.3_1_3:150459106-150459289:-|nuORF	ENST00000312960.3_1_3:150459106-150459289:-|nuORF	ENST00000312960.3_1_3:150459106-150459289:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.2886352539062	2	560.289682	1118.56481	0.66776	0.00037414	-4.0838	-0.0022881	-3.4161	-0.001914	560.287268376834	78.313	1.0768	78.365	78.021	79.097	0.051674					72	31	4	0	0	0	0.72402	1	7666	7666		38.806	4.6336	1	833690			58798	9943	39255	39271	66634	66634					0.010272073831856687
TPEIYWKL	8	Unmodified	_TPEIYWKL_					0	0	0		ENSG00000198765|ENST00000369522|SYCP1	ENSG00000198765|ENST00000369522|SYCP1	ENSG00000198765|ENST00000369522|SYCP1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.2883911132812	2	525.286943	1048.55933	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.449	1	19.374	18.874	19.874	-0.074974								0	0	0	0.30125	1	423	423		20.482	1.1219	1				58799	8326	39256	39272	66635	66635					0.03699528591369017
TPELFPLE	8	Unmodified	_TPELFPLE_					0	0	0			REV__ENST00000579687.5_1_17:62085176-62097960:-|nuORF	REV__ENST00000579687.5_1_17:62085176-62097960:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.2489929199219	2	473.250026	944.485499	-0.25967	-0.00012289	-3.9284	-0.0018591	-4.188	-0.001982	473.2481063617417	28.965	1.9145	28.925	28.439	30.354	-0.039907					103	58	4	0	0	0	0.92973	1	1515	1515		50.025	5.4935	1	555530	+		58800	26380	39257	39273	66636	66636					0.01103560429044137
TPELPCPSSLN	11	Carbamidomethyl (C)	_TPELPC(Carbamidomethyl (C))PSSLN_	TPELPC(1)PSSLN		TPELPC(62)PSSLN		0	1	0		ENST00000597611.7_3_19:18654757-18654817:-|nuORF	ENST00000597611.7_3_19:18654757-18654817:-|nuORF	ENST00000597611.7_3_19:18654757-18654817:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	607.7893676757812	2	607.789721	1213.56489	-0.25303	-0.00015379	-2.5585	-0.0015551	-2.8116	-0.0017088	607.7880797502846	53.931	0.67444	53.906	53.602	54.277	-0.02475					42	16	3	0	0	0	0.36477	1	4869	4869		62.107	7.3311	1	464060			58801	14361	39258	39274	66637	66637	191				-0.03335160679125693
TPELPTEF	8	Unmodified	_TPELPTEF_					0	0	0		nc|ENSG00000166575|Q86UB9-2|TMEM135;ENSG00000166575|ENST00000305494|TMEM135	nc|ENSG00000166575|Q86UB9-2|TMEM135	nc|ENSG00000166575|Q86UB9-2|TMEM135	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.2352600097656	2	467.231833	932.449113	-1.0422	-0.00048693	4.2673	0.0019938	3.2252	0.0015069	467.23380164983837	67.827	1.4777	67.962	67.582	69.06	0.13521					154	58	4	0	0	0	0.91005	1	6164	6164		42.474	3.2216	1	2802800			58802	6210	39259	39275	66638	66638					-0.019813164676747874
TPELPTEF	8	Unmodified	_TPELPTEF_					0	0	0		nc|ENSG00000166575|Q86UB9-2|TMEM135;ENSG00000166575|ENST00000305494|TMEM135	nc|ENSG00000166575|Q86UB9-2|TMEM135	nc|ENSG00000166575|Q86UB9-2|TMEM135	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.23345947265625	2	467.231833	932.449113	-0.45838	-0.00021417	3.1345	0.0014645	2.6761	0.0012504	467.23359025373514	64.723	2.0657	65.109	64.482	66.548	0.38615					153	52	5	0	0	0	0.87479	1	7193	7193		30.504	0.6621	1	8112800			58803	6210	39259	39275	66639	66639					-0.019813164676747874
TPESAKTDL	9	Unmodified	_TPESAKTDL_					0	0	0		nc|ENSG00000138650|Q9P2E7-2|PCDH10;ENSG00000138650|ENST00000264360|PCDH10	nc|ENSG00000138650|Q9P2E7-2|PCDH10	nc|ENSG00000138650|Q9P2E7-2|PCDH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.2452392578125	2	481.245472	960.476391	-0.24513	-0.00011797	0.15905	7.6544E-05	-0.086073	-4.1422E-05	481.24542771564984	28.473	0.88937	28.433	27.926	28.816	-0.039907					49	21	3	0	0	0	0.36616	1	1449	1449		60.118	8.9256	1	264800			58804	4312	39260	39276	66640	66640					-0.005428329272717747
TPESCDVPPL	10	Unmodified	_TPESCDVPPL_					0	0	0		ENSG00000181378|ENST00000341552|CFAP65;nc|ENSG00000181378|Q6ZU64-4|CFAP65;nc|ENSG00000181378|Q6ZU64-5|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7216186523438	2	529.247157	1056.47976	0.029878	1.5813E-05	-2.95	-0.0015613	-2.9202	-0.0015455	529.2455507302006	66.742	2.1365	67.293	66.859	68.995	0.55071					89	57	2	0	0	0	0.37624	1	7343	7343		19.997	0	1	218910			58805	7383	39261	39277	66641	66641					-0.04621906144939203
TPETGLKE	8	Unmodified	_TPETGLKE_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.7287292480469	2	437.729458	873.444362	0.48198	0.00021098	0.13299	5.8214E-05	0.61497	0.00026919	437.7294765331459	26.126	0.69964	26.172	25.815	26.515	0.045509					43	19	4	0	0	0	0.93786	1	1073	1073		53.351	0	1	121760			58806	8999	39262	39278	66642	66642					0.0025779938957839477
TPETLQTL	8	Unmodified	_TPETLQTL_					0	0	0		ENSG00000268041|ENST00000597630|ERFL	ENSG00000268041|ENST00000597630|ERFL	ENSG00000268041|ENST00000597630|ERFL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.74542236328125	2	451.745108	901.475663	0.00016611	7.5038E-08	0.28443	0.00012849	0.2846	0.00012857	451.7450667794695	33.328	0.79413	33.331	32.989	33.783	0.0030785					41	18	3	0	0	0	0.66521	1	1914	1914		68.787	0	1	260270			58807	8960	39263	39279	66643	66643					0.020983724236884882
TPEVTSVPPP	10	Unmodified	_TPEVTSVPPP_					0	0	0		nc|ENSG00000152430|Q8N9W6-5|BOLL;ENSG00000152430|ENST00000392296|BOLL;nc|ENSG00000152430|Q8N9W6-4|BOLL;nc|ENSG00000152430|Q8N9W6-3|BOLL;nc|ENSG00000152430|Q8N9W6-2|BOLL	nc|ENSG00000152430|Q8N9W6-5|BOLL	nc|ENSG00000152430|Q8N9W6-5|BOLL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.2706298828125	2	512.27149	1022.52843	2.157	0.001105	-3.7559	-0.001924	-1.5989	-0.00081907	512.2694110072075	106.86	1.3321	106.96	106.54	107.87	0.10396					84	53	2	0	0	0	0.86589	1	13008	13008		29.15	6.1071	1	212630			58808	5174	39264	39280	66644	66644					0.018063304864767815
TPGALLWLHGL	11	Unmodified	_TPGALLWLHGL_					0	0	0			REV__nc|ENSG00000148204|Q5IJ48-3|CRB2	REV__nc|ENSG00000148204|Q5IJ48-3|CRB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427124023438	2	589.340041	1176.66553	0.83312	0.00049099	4.0027	0.002359	4.8358	0.00285	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.61774	1	9500	9500		42.396	7.2441	1	20363000	+		58809	29922	39265	39281	66645	66645					0.0842628415668969
TPGANKVLFV	10	Unmodified	_TPGANKVLFV_					0	0	0		ENST00000485603.1_1_6:27222413-27223091:+|nuORF;ENST00000468138.5_1_6:27219498-27223091:+|nuORF;ENSG00000112812|ENST00000230582|PRSS16	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.303466796875	2	523.305667	1044.59678	-0.79828	-0.00041774	-3.1608	-0.0016541	-3.9591	-0.0020718	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.77314	1	8658	8658		40.778	3.6191	1	9288900			58810	2683	39266	39282	66646	66646					0.0762661985700106
TPGANKVLFV	10	Unmodified	_TPGANKVLFV_					0	0	0		ENST00000485603.1_1_6:27222413-27223091:+|nuORF;ENST00000468138.5_1_6:27219498-27223091:+|nuORF;ENSG00000112812|ENST00000230582|PRSS16	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3040161132812	2	523.305667	1044.59678	-0.7542	-0.00039468	-3.0063	-0.0015732	-3.7605	-0.0019679	523.3039964981095	91.826	2.332	91.826	91.507	93.839	0					135	53	3	0	0	0	0.80179	1	8985	8985		39.253	6.5023	1	769560			58811	2683	39266	39282	66647	66647					0.0762661985700106
TPGANKVLFV	10	Unmodified	_TPGANKVLFV_					0	0	0		ENST00000485603.1_1_6:27222413-27223091:+|nuORF;ENST00000468138.5_1_6:27219498-27223091:+|nuORF;ENSG00000112812|ENST00000230582|PRSS16	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3035278320312	2	523.305667	1044.59678	-0.178	-9.3149E-05	-4.0857	-0.0021381	-4.2637	-0.0022312	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.8608	1	8418	8418		34.173	3.6689	1	4158500			58812	2683	39266	39282	66648	66648					0.0762661985700106
TPGANKVLFV	10	Unmodified	_TPGANKVLFV_					0	0	0		ENST00000485603.1_1_6:27222413-27223091:+|nuORF;ENST00000468138.5_1_6:27219498-27223091:+|nuORF;ENSG00000112812|ENST00000230582|PRSS16	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.67571	3	8787	8715;8763;8787		45.972	14.442	1	12189000			58813	2683	39266	39282	66649;66650;66651	66651					0.0762661985700106
TPGANKVLFV	10	Unmodified	_TPGANKVLFV_					0	0	0		ENST00000485603.1_1_6:27222413-27223091:+|nuORF;ENST00000468138.5_1_6:27219498-27223091:+|nuORF;ENSG00000112812|ENST00000230582|PRSS16	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3037109375	2	523.305667	1044.59678	-1.5391	-0.00080541	-2.1942	-0.0011482	-3.7333	-0.0019536	523.3043931360254	91.382	2.3991	91.563	91.237	93.636	0.18029					145	56	4	0	0	0	0.86218	1	9161	9161		32.812	3.6629	1	1040100			58814	2683	39266	39282	66652	66652					0.0762661985700106
TPGANKVLFV	10	Unmodified	_TPGANKVLFV_					0	0	0		ENST00000485603.1_1_6:27222413-27223091:+|nuORF;ENST00000468138.5_1_6:27219498-27223091:+|nuORF;ENSG00000112812|ENST00000230582|PRSS16	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	ENST00000485603.1_1_6:27222413-27223091:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3037719726562	2	523.305667	1044.59678	-1.0823	-0.0005664	-2.8643	-0.0014989	-3.9466	-0.0020653	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.86218	1	10717	10717		32.812	3.6629	1	13160000			58815	2683	39266	39282	66653	66653					0.0762661985700106
TPGARKPGGV	10	Unmodified	_TPGARKPGGV_					0	0	0			REV__ENST00000513965.5_1_3:128968531-128971678:+|nuORF	REV__ENST00000513965.5_1_3:128968531-128971678:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.272216796875	2	470.272158	938.529764	-1.0259	-0.00048243	0.96935	0.00045586	-0.056507	-2.6574E-05	470.27263416214146	92.531	3.2683	92.531	91.425	94.693	0					153	75	5	0	0	0	0.85939	1	9128	9128		23.042	0	1	1224900	+		58816	28001	39267	39283	66654	66654					0.058040093659201375
TPGDDSYCCD	10	Unmodified	_TPGDDSYCCD_					0	0	0			REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	REV__nc|ENSG00000047346|Q32MH5-2|ATOSA	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3267211914062	2	538.170789	1074.32703	-1.4906	-0.00080221	-2.0014	-0.0010771	-3.492	-0.0018793	538.1673659731629	100.86	0.4023	101.01	100.8	101.2	0.15841					19	9	3	0	0	0	0.37624	1	10500	10500		34.173	22.662	1	80265	+		58817	16350	39268	39284	66655	66655					-0.20716469603848964
TPGGKKRSI	9	Unmodified	_TPGGKKRSI_					0	0	0		ENST00000515081.1_1_4:56820464-56832049:+|nuORF;nc|ENSG00000174799|Q66GS9-2|CEP135;ENSG00000174799|ENST00000257287|CEP135	ENST00000515081.1_1_4:56820464-56832049:+|nuORF	ENST00000515081.1_1_4:56820464-56832049:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2873229980469	2	472.287808	942.561064	2.4783	0.0011705	-1.6779	-0.00079243	0.80042	0.00037803	472.28709322712206	99.355	1.7964	99.301	98.824	100.62	-0.053734					80	41	2	0	0	0	0.7932	1	10735	10735		25.574	1.3713	1	447940			58818	6964	39269	39285	66656	66656					0.08748582400005489
TPGKPGEYDLE	11	Unmodified	_TPGKPGEYDLE_					0	0	0		ENSG00000151461|ENST00000357604|UPF2	ENSG00000151461|ENST00000357604|UPF2	ENSG00000151461|ENST00000357604|UPF2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	603.7606811523438	2	603.287868	1204.56118	1.0282	0.00062029	-2.7684	-0.0016702	-1.7403	-0.0010499	603.2863808193148	112.18	0.092255	112.28	112.2	112.29	0.10638					4	2	2	0	0	0	0.18136	1	12079	12079		14.137	1.9303	1	1855300			58819	5118	39270	39286	66657	66657					-0.0329150718132496
TPGLRESSG	9	Unmodified	_TPGLRESSG_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.9482421875	2	452.230156	902.445759	-0.96183	-0.00043497	-3.1942	-0.0014445	-4.156	-0.0018795	452.2285707417024	107.27	0.79755	107.27	106.93	107.73	0					38	18	3	0	0	0	0.20789	1	11211	11211		35.618	10.044	1	409510			58820	7373	39271	39287	66658	66658					-0.009365665216478192
TPGLRESSG	9	Unmodified	_TPGLRESSG_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.9486083984375	2	452.230156	902.445759	-1.7704	-0.00080062	-2.8217	-0.001276	-4.592	-0.0020767	452.22888606479796	107.13	0.85985	107.17	106.81	107.67	0.036125					53	20	4	0	0	0	0.20789	1	11430	11430		62.107	17.73	1	1056800			58821	7373	39271	39287	66659	66659					-0.009365665216478192
TPGLRESSG	9	Unmodified	_TPGLRESSG_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	452.230156	902.445759	1.1697	0.00052896	-5.8577	-0.002649	-4.6881	-0.0021201	452.22766943283847	107.06	0.98818	107.17	106.77	107.76	0.10396	-0.02938	-0.0011042	NaN	35.618	98	37	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2682300			58822	7373	39271	39287							-0.009365665216478192
TPGLRWILSSK	11	Unmodified	_TPGLRWILSSK_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.5511169433594	3	419.915312	1256.72411	0.43003	0.00018057	-0.31971	-0.00013425	0.11032	4.6324E-05	419.9151411129921	29.9	0.55914	29.81	29.489	30.048	-0.089544					31	12	3	0	0	0	0.17626	1	1907	1907		23.514	16.855	1	310430	+		58823	18793	39272	39288	66660	66660					0.10601340731182063
TPGPLPAAKRR	11	Unmodified	_TPGPLPAAKRR_					0	0	0			REV__ENSG00000092978|ENST00000366935|GPATCH2	REV__ENSG00000092978|ENST00000366935|GPATCH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.353515625	2	582.354014	1162.69348	-0.84093	-0.00048972	-0.12395	-7.2182E-05	-0.96488	-0.0005619	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.72106	1	11279	11279		28.081	1.3886	1	77752000	+		58824	17042	39273	39289	66661	66661					0.1186360713677459
TPGPLPAAKRR	11	Unmodified	_TPGPLPAAKRR_					0	0	0			REV__ENSG00000092978|ENST00000366935|GPATCH2	REV__ENSG00000092978|ENST00000366935|GPATCH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3536376953125	2	582.354014	1162.69348	0.15817	9.2113E-05	-1.1126	-0.00064794	-0.95444	-0.00055582	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.7144	1	11327	11327		29.17	1.2878	1	78004000	+		58825	17042	39273	39289	66662	66662					0.1186360713677459
TPGPLPAAKRR	11	Unmodified	_TPGPLPAAKRR_					0	0	0			REV__ENSG00000092978|ENST00000366935|GPATCH2	REV__ENSG00000092978|ENST00000366935|GPATCH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.353759765625	2	582.354014	1162.69348	0.7203	0.00041947	-2.4943	-0.0014526	-1.774	-0.0010331	582.3524298661342	107.84	0.6711	107.98	107.36	108.03	0.13866					46	16	3	0	0	0	0.70737	1	11518	11518		30.318	4.7437	1	12863000	+		58826	17042	39273	39289	66663	66663					0.1186360713677459
TPGPLPAAKRR	11	Unmodified	_TPGPLPAAKRR_					0	0	0			REV__ENSG00000092978|ENST00000366935|GPATCH2	REV__ENSG00000092978|ENST00000366935|GPATCH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3534545898438	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.76322	1	12860	12860		19.104	0.84144	1	3937500	+		58827	17042	39273	39289	66664	66664					0.1186360713677459
TPGPLTLL	8	Unmodified	_TPGPLTLL_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000023055	REV__CON__ENSEMBL:ENSBTAP00000023055	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2481689453125	2	406.249829	810.485105	-1.9274	-0.00078302	-1.0619	-0.00043141	-2.9894	-0.0012144	406.2493147377016	111.43	0.80137	111.41	111.05	111.85	-0.019882					56	30	2	0	0	0	0.85277	1	11897	11897		25.45	3.7478	1	107510	+	+	58828	15962	39274	39290	66665	66665					0.07228185499855044
TPGPPGHH	8	Unmodified	_TPGPPGHH_					0	0	0			REV__ENST00000489526.1_1_10:102762295-102762823:+|nuORF	REV__ENST00000489526.1_1_10:102762295-102762823:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.19622802734375	2	400.195919	798.377286	2.9562	0.001183	-3.4082	-0.001364	-0.45205	-0.00018091	400.19504393030127	86.25	1.3268	86.305	85.975	87.302	0.055641					56	30	3	0	0	0	0.89457	1	8778	8778		37.028	1.8278	1	2395800	+		58829	17675	39275	39291	66666	66666					-0.029967663108664055
TPGRNHHNETP	11	Unmodified	_TPGRNHHNETP_					0	0	0			REV__nc|ENSG00000260916|Q9ULG6-2|CCPG1	REV__nc|ENSG00000260916|Q9ULG6-2|CCPG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.2973022460938	2	630.297424	1258.5803	1.2871	0.00081123	-2.0322	-0.0012809	-0.74518	-0.00046969	630.2960473873329	23.81	0.6923	23.863	23.602	24.294	0.05291					51	30	2	0	0	0	0.62614	1	782	782		41.427	1.3684	1	159760	+		58830	23940	39276	39292	66667	66667					-0.03865113047072555
TPHPCPWPE	9	Unmodified	_TPHPCPWPE_					0	0	0			REV__ENST00000497341.5_1_2:27477956-27478319:-|nuORF	REV__ENST00000497341.5_1_2:27477956-27478319:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.2380981445312	2	532.236927	1062.4593	0.26072	0.00013877	1.5601	0.00083036	1.8209	0.00096913	532.2375023776897	39.934	0.69376	39.904	39.565	40.258	-0.03027					33	16	3	0	0	0	0.78536	1	2815	2815		29.15	0	1	251430	+		58831	27767	39277	39293	66668	66668					-0.06943032014078199
TPHPPPAAPG	10	Unmodified	_TPHPPPAAPG_					0	0	0		ENST00000411937.6_1_4:151174705-151177396:+|nuORF;nc|ENSG00000170390|Q8N568-2|DCLK2;ENSG00000170390|ENST00000296550|DCLK2;nc|ENSG00000170390|Q8N568-3|DCLK2	ENST00000411937.6_1_4:151174705-151177396:+|nuORF	ENST00000411937.6_1_4:151174705-151177396:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.2419738769531	2	471.245609	940.476666	-0.21882	-0.00010312	-3.6849	-0.0017365	-3.9038	-0.0018396	471.24368623226155	85.627	3.5823	85.685	84.499	88.081	0.057899					161	82	3	0	0	0	0.86589	1	8738	8738		29.15	0	1	246480			58832	6583	39278	39294	66669	66669					0.0040463158322836534
TPHSEIIFY	9	Unmodified	_TPHSEIIFY_					0	0	0		nc|ENSG00000129691|Q9UBL3-3|ASH2L;ENSG00000129691|ENST00000343823|ASH2L	nc|ENSG00000129691|Q9UBL3-3|ASH2L	nc|ENSG00000129691|Q9UBL3-3|ASH2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.7800903320312	2	553.779482	1105.54441	-0.12531	-6.9394E-05	0.45243	0.00025054	0.32712	0.00018115	553.7795828280824	58.607	0.61893	59.161	58.837	59.456	0.55323					35	14	3	0	0	0	0.39977	1	6158	6158		57.811	2.3071	1	625050			58833	3603	39279	39295	66670	66670					-0.004139632766282375
TPHSLPAPRAP	11	Unmodified	_TPHSLPAPRAP_					0	0	0			REV__ENSG00000234965|ENST00000621082|SHISA8	REV__ENSG00000234965|ENST00000621082|SHISA8	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	572.3164672851562	2	572.317097	1142.61964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.561	1	47.58	47.08	48.08	0.018967								0	0	0	0.56276	1	3566	3566		36.447	4.4919	1		+		58834	23781	39280	39296	66671	66671					0.054036389744851476
TPHTVPTFVLP	11	Unmodified	_TPHTVPTFVLP_					0	0	0		ENST00000596682.5_1_19:40871466-40872336:+|nuORF;ENST00000392032.6_1_19:40871799-40872336:+|nuORF;ENST00000409419.5_1_19:40854631-40872336:+|nuORF	ENST00000596682.5_1_19:40871466-40872336:+|nuORF	ENST00000596682.5_1_19:40871466-40872336:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.5595703125	3	403.560646	1207.66011	2.8514	0.0011507	-4.3616	-0.0017602	-1.5102	-0.00060945	403.5587881215693	22.775	1.0826	22.725	22.354	23.437	-0.050077					94	41	3	0	0	0	0.71803	1	742	742		28.577	1.5294	1	140620			58835	11010	39281	39297	66672	66672					0.06458560574242256
TPIASAWLLK	10	Unmodified	_TPIASAWLLK_					0	0	0		ENSG00000172071|ENST00000303236|EIF2AK3	ENSG00000172071|ENST00000303236|EIF2AK3	ENSG00000172071|ENST00000303236|EIF2AK3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.326904296875	2	550.329142	1098.64373	-0.59914	-0.00032972	-2.8774	-0.0015835	-3.4766	-0.0019133	550.3275633204873	100.31	1.098	100.35	99.837	100.93	0.041107					67	24	4	0	0	0	0.86763	1	10740	10740		26.693	0	1	446840			58836	6739	39282	39298	66673	66673					0.09835479408116043
TPIHFPGG	8	Unmodified	_TPIHFPGG_					0	0	0		ENSG00000101890|ENST00000218006|GUCY2F	ENSG00000101890|ENST00000218006|GUCY2F	ENSG00000101890|ENST00000218006|GUCY2F	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2380065917969	2	413.216321	824.418088	0.52205	0.00021572	-3.2152	-0.0013286	-2.6931	-0.0011128	413.2142407846755	77.24	0.2884	77.375	77.247	77.536	0.13478					20	14	2	0	0	0	0.4196	1	7251	7251		29.842	0	1	54488			58837	1967	39283	39299	66674	66674					-0.0011442499123859307
TPIHFPGG	8	Unmodified	_TPIHFPGG_					0	0	0		ENSG00000101890|ENST00000218006|GUCY2F	ENSG00000101890|ENST00000218006|GUCY2F	ENSG00000101890|ENST00000218006|GUCY2F	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.23681640625	2	413.216321	824.418088	-1.4878	-0.00061478	-0.22344	-9.233E-05	-1.7112	-0.00070711	413.2146897928424	75.986	0.32319	76.075	75.888	76.211	0.089363					15	8	3	0	0	0	0.4196	1	7052	7052		14.664	0.88877	1	26912			58838	1967	39283	39299	66675	66675					-0.0011442499123859307
TPIIRRRWKTT	11	Unmodified	_TPIIRRRWKTT_					0	0	0		ENST00000321892.8_1_17:65822219-65850151:+|nuORF	ENST00000321892.8_1_17:65822219-65850151:+|nuORF	ENST00000321892.8_1_17:65822219-65850151:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62396240234375	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.77511	6	12399	12280;12399;12555;12578;12600;12611		16.53	2.8536	1	2577100			58839	10044	39284	39300	66676;66677;66678;66679;66680;66681	66677					0.15574901045056322
TPIIVIPFF	9	Unmodified	_TPIIVIPFF_					0	0	0			REV__ENSG00000150893|ENST00000280481|FREM2	REV__ENSG00000150893|ENST00000280481|FREM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8201293945312	2	523.817879	1045.6212	2.4724	0.0012951	2.2037	0.0011544	4.6762	0.0024495	523.8192193723954	107.75	0.79723	107.85	107.16	107.96	0.10396					58	30	2	0	0	0	0.7932	1	13142	13142		25.45	6.0902	1	1011100	+		58840	20223	39285	39301	66682	66682					0.10021880010503992
TPIKDGILY	9	Unmodified	_TPIKDGILY_					0	0	0		ENSG00000146094|ENST00000510898|DOK3;nc|ENSG00000146094|Q7L591|DOK3;ENST00000512660.1_1_5:176936187-176936779:-|nuORF;ENST00000502380.1_1_5:176936187-176937359:-|nuORF;nc|ENSG00000146094|Q7L591-4|DOK3;nc|ENSG00000146094|Q7L591-3|DOK3	ENSG00000146094|ENST00000510898|DOK3	ENSG00000146094|ENST00000510898|DOK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.292236328125	2	510.292225	1018.5699	0.26746	0.00013648	-0.4846	-0.00024729	-0.21715	-0.00011081	510.2918455179726	53.31	1.1574	53.724	52.92	54.077	0.4139					73	27	4	0	0	0	0.18338	1	5392	5392		77.318	14.011	1	3524900			58841	4821	39286	39302	66683	66683					0.06135511245804537
TPIKDGILY	9	Unmodified	_TPIKDGILY_					0	0	0		ENSG00000146094|ENST00000510898|DOK3;nc|ENSG00000146094|Q7L591|DOK3;ENST00000512660.1_1_5:176936187-176936779:-|nuORF;ENST00000502380.1_1_5:176936187-176937359:-|nuORF;nc|ENSG00000146094|Q7L591-4|DOK3;nc|ENSG00000146094|Q7L591-3|DOK3	ENSG00000146094|ENST00000510898|DOK3	ENSG00000146094|ENST00000510898|DOK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2920837402344	2	510.292225	1018.5699	0.40066	0.00020445	-0.55977	-0.00028565	-0.15911	-8.1194E-05	510.29177277605464	53.089	1.3705	53.703	52.95	54.321	0.61436					88	32	4	0	0	0	0.12688	3	5364	5364;5376;5388		87.696	13.722	1	3542700			58842	4821	39286	39302	66684;66685;66686	66684					0.06135511245804537
TPIKDGILY	9	Unmodified	_TPIKDGILY_					0	0	0		ENSG00000146094|ENST00000510898|DOK3;nc|ENSG00000146094|Q7L591|DOK3;ENST00000512660.1_1_5:176936187-176936779:-|nuORF;ENST00000502380.1_1_5:176936187-176937359:-|nuORF;nc|ENSG00000146094|Q7L591-4|DOK3;nc|ENSG00000146094|Q7L591-3|DOK3	ENSG00000146094|ENST00000510898|DOK3	ENSG00000146094|ENST00000510898|DOK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.29205322265625	2	510.292225	1018.5699	0.28458	0.00014522	-0.21226	-0.00010831	0.072316	3.6902E-05	510.2919738028183	53.674	0.62811	54.259	54.039	54.667	0.58474					25	14	2	0	0	0	0.58668	1	5458	5458		47.657	5.2612	1	573270			58843	4821	39286	39302	66687	66687					0.06135511245804537
TPILEKCKKKR	11	Unmodified	_TPILEKCKKKR_					0	0	0			REV__ENSG00000174844|ENST00000495027|DNAH12	REV__ENSG00000174844|ENST00000495027|DNAH12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.60894775390625	3	448.611235	1342.81188	-1.3124	-0.00058875	-2.8814	-0.0012926	-4.1937	-0.0018814	448.6097327049683	74.956	1.1468	75.082	74.623	75.77	0.12545					89	30	4	0	0	0	0.77205	1	6958	6958		17.167	1.8293	1	427440	+		58844	22019	39287	39303	66688	66688					0.15418218330273703
TPIQDNVDQTY	11	Unmodified	_TPIQDNVDQTY_					0	0	0		nc|ENSG00000174500|Q8N6F7-3|GCSAM;ENSG00000174500|ENST00000308910|GCSAM;nc|ENSG00000174500|Q8N6F7-2|GCSAM	nc|ENSG00000174500|Q8N6F7-3|GCSAM	nc|ENSG00000174500|Q8N6F7-3|GCSAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	647.8036499023438	2	647.301507	1292.58846	0.10993	7.1156E-05	-1.4799	-0.00095791	-1.3699	-0.00088676	647.3009722475889	53.463	0.86907	53.877	53.457	54.326	0.4139					57	20	4	0	0	0	0.0055902	2	5400	5400;5411		112.3	43.449	1	1418400			58845	6940	39288	39304	66689;66690	66689					-0.04613023640968095
TPIQDNVDQTY	11	Unmodified	_TPIQDNVDQTY_					0	0	0		nc|ENSG00000174500|Q8N6F7-3|GCSAM;ENSG00000174500|ENST00000308910|GCSAM;nc|ENSG00000174500|Q8N6F7-2|GCSAM	nc|ENSG00000174500|Q8N6F7-3|GCSAM	nc|ENSG00000174500|Q8N6F7-3|GCSAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	647.8012084960938	2	647.301507	1292.58846	1.385	0.00089649	-2.3751	-0.0015374	-0.99013	-0.00064091	647.3003381948532	53.286	1.1652	53.9	53.408	54.573	0.61436					57	27	3	0	0	0	0.38974	2	5379	5379;5389		60.167	17.303	1	1196400			58846	6940	39288	39304	66691;66692	66691					-0.04613023640968095
TPKAGVLTP	9	Unmodified	_TPKAGVLTP_					0	0	0		ENSG00000079432|ENST00000681038|CIC	ENSG00000079432|ENST00000681038|CIC	ENSG00000079432|ENST00000681038|CIC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.26556396484375	2	442.26601	882.517468	-0.19204	-8.4931E-05	0.59771	0.00026435	0.40568	0.00017942	442.26615321014356	37.584	1.2785	37.897	36.921	38.2	0.31312					68	31	3	0	0	0	0.36616	1	3023	3023		60.118	2.307	1	1603100			58847	1421	39289	39305	66693	66693					0.07150972902832109
TPKARLTGN	9	Unmodified	_TPKARLTGN_					0	0	0			REV__ENSG00000143217|ENST00000368012|NECTIN4	REV__ENSG00000143217|ENST00000368012|NECTIN4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.277587890625	2	479.277441	956.540328	-1.1288	-0.000541	1.082	0.00051859	-0.046771	-2.2416E-05	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.77696	1	7787	7787		31.53	0	1	1311100	+		58848	19784	39290	39306	66694	66694					0.06031992020314192
TPKEEAQALE	10	Unmodified	_TPKEEAQALE_					0	0	0		nc|ENSG00000148773|P46013-2|MKI67;chr10:128113602-128116491|53|23.43|0.71|5.05|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67	nc|ENSG00000148773|P46013-2|MKI67	nc|ENSG00000148773|P46013-2|MKI67	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.288818359375	2	558.282586	1114.55062	0.12978	7.2453E-05	3.2756	0.0018287	3.4054	0.0019012	558.2839602042076	75.399	0.59948	75.353	75.025	75.624	-0.045982					34	15	3	0	0	0	0.80179	1	7458	7458		39.253	11.171	1	108530			58849	66	39291	39307	66695	66695					-0.002074898357705024
TPKETPTT	8	Unmodified	_TPKETPTT_					0	0	0			REV__nc|ENSG00000146839|Q9Y493-6|ZAN	REV__nc|ENSG00000146839|Q9Y493-6|ZAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.7292175292969	2	437.729458	873.444362	1.7083	0.00074777	-1.1639	-0.00050946	0.54441	0.0002383	437.72880961394964	26.367	0.80959	26.334	25.983	26.792	-0.032125					38	17	3	0	0	0	0.92457	1	1126	1126		47.916	1.9636	1	136100	+		58850	20035	39292	39308	66696	66696					0.002577993895556574
TPKGGKYAIN	10	Unmodified	_TPKGGKYAIN_					0	0	0		ENSG00000141101|ENST00000268802|NOB1	ENSG00000141101|ENST00000268802|NOB1	ENSG00000141101|ENST00000268802|NOB1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.826904296875	2	524.792924	1047.57129	0.81241	0.00042635	-1.8534	-0.00097267	-1.041	-0.00054632	524.7907269479091	99.142	0.65193	99.299	98.99	99.642	0.15659					26	15	2	0	0	0	0.37624	1	10364	10364		56.434	17.628	1	103660			58851	4479	39293	39309	66697	66697					0.049411453345555856
TPKGLLLLQRT	11	Unmodified	_TPKGLLLLQRT_					0	0	0		nc|ENSG00000146350|Q96NH3-4|TBC1D32;ENSG00000146350|ENST00000398212|TBC1D32	nc|ENSG00000146350|Q96NH3-4|TBC1D32	nc|ENSG00000146350|Q96NH3-4|TBC1D32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.9329528808594	3	413.930962	1238.77106	1.6433	0.00068023	2.1649	0.00089611	3.8082	0.0015763	413.9318142026393	43.114	2.2589	43.114	42.157	44.416	0.00016785					149	54	3	0	0	0	0.75121	1	3379	3379		21.78	2.5177	1	500010			58852	4836	39294	39310	66698	66698					0.161222002823024
TPKIVQKPAQR	11	Unmodified	_TPKIVQKPAQR_					0	0	0			REV__ENSG00000151651|ENST00000445355|ADAM8	REV__ENSG00000151651|ENST00000445355|ADAM8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.59320068359375	3	422.594461	1264.76155	-0.62547	-0.00026432	-2.6174	-0.0011061	-3.2429	-0.0013704	422.59330051155865	54.406	2.5675	54.38	53.515	56.082	-0.025955					176	70	5	0	0	0	0.76251	1	4949	4949		19.263	0.73163	1	1069500	+		58853	20262	39295	39311	66699	66699					0.13976431996775318
TPKKAKKPKT	10	Unmodified	_TPKKAKKPKT_					0	0	0		nc|ENSG00000189060|P07305-2|H1-0;ENSG00000189060|ENST00000340857|H1-0	nc|ENSG00000189060|P07305-2|H1-0	nc|ENSG00000189060|P07305-2|H1-0	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	563.8690795898438	2	563.868966	1125.72338	0.29998	0.00016915	-0.3506	-0.00019769	-0.05062	-2.8543E-05	563.8686315465658	15.19	0.31397	15.239	15.137	15.451	0.049079					21	11	3	0	0	0	0.62712	1	22	22		48.602	7.1749	1	162300			58854	7986	39296	39312	66700	66700					0.16554546082102206
TPKKAKKPKT	10	Unmodified	_TPKKAKKPKT_					0	0	0		nc|ENSG00000189060|P07305-2|H1-0;ENSG00000189060|ENST00000340857|H1-0	nc|ENSG00000189060|P07305-2|H1-0	nc|ENSG00000189060|P07305-2|H1-0	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	563.867431640625	2	563.868966	1125.72338	0.97876	0.00055189	-0.57636	-0.00032499	0.4024	0.0002269	563.8683902252228	15.49	0.24173	15.466	15.325	15.567	-0.024207					13	6	3	0	0	0	0.66675	1	39	39		46.457	0.48454	1	183090			58855	7986	39296	39312	66701	66701					0.16554546082102206
TPKKKHSN	8	Unmodified	_TPKKKHSN_					0	0	0		ENST00000305883.5_1_2:10193335-10193581:+|nuORF	ENST00000305883.5_1_2:10193335-10193581:+|nuORF	ENST00000305883.5_1_2:10193335-10193581:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.272216796875	2	470.272158	938.529764	-1.0259	-0.00048243	0.96935	0.00045586	-0.056507	-2.6574E-05	470.27263416214146	92.531	3.2683	92.531	91.425	94.693	0					153	75	5	0	0	0	0.87792	1	9102	9102		31.53	3.6476	1	1224900			58856	9855	39297	39313	66702	66702					0.058040093658974
TPKKTKRYQ	9	Unmodified	_TPKKTKRYQ_					0	0	0			REV__nc|ENSG00000134897|Q86UB2-2|BIVM	REV__nc|ENSG00000134897|Q86UB2-2|BIVM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.34033203125	2	575.340572	1148.66659	-1.4031	-0.00080726	1.4395	0.00082822	0.036418	2.0953E-05	575.341163197935	38.821	0.945	38.832	38.358	39.303	0.011173					51	21	3	0	0	0	0.41566	1	2680	2680		56.721	1.9987	1	287500	+		58857	29859	39298	39314	66703	66703					0.09820498525596122
TPKLHTTLLKM	11	Unmodified	_TPKLHTTLLKM_					0	0	0			REV__ENST00000554674.1_1_14:24799917-24801775:-|nuORF	REV__ENST00000554674.1_1_14:24799917-24801775:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8823852539062	2	641.881216	1281.74788	2.2004	0.0014124	-0.30032	-0.00019277	1.9001	0.0012196	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.72106	1	10430	10430		28.081	1.3886	1	3624200	+		58858	28669	39299	39315	66704	66704					0.1182743817332721
TPKLLRTRHR	10	Unmodified	_TPKLLRTRHR_					0	0	0		ENST00000565700.1_1_16:84494217-84494358:-|nuORF	ENST00000565700.1_1_16:84494217-84494358:-|nuORF	ENST00000565700.1_1_16:84494217-84494358:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.24609375	3	426.60195	1276.78402	0.61755	0.00026345	4.2669	0.0018203	4.8845	0.0020837	426.6029891487965	87.866	0.13011	88.015	87.94	88.07	0.14956					4	2	2	0	0	0	0.37624	1	8691	8691		19.263	12.244	1	22837			58859	13921	39300	39316	66705	66705					0.1567007618509706
TPKLMVDLL	9	Oxidation (M)	_TPKLM(Oxidation (M))VDLL_		TPKLM(1)VDLL		TPKLM(41)VDLL	0	0	1		ENSG00000181927|ENST00000641760|OR4P4	ENSG00000181927|ENST00000641760|OR4P4	ENSG00000181927|ENST00000641760|OR4P4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3035888671875	2	523.301736	1044.58892	1.699	0.00088911	1.7632	0.00092271	3.4623	0.0018118	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.69624	1	9184	9184		40.778	6.8565	1	13080000			58860	7414	39301	39317	66706	66706		129			0.06840724545213561
TPKLNRPGG	9	Unmodified	_TPKLNRPGG_					0	0	0			REV__ENSG00000131435|ENST00000253754|PDLIM4	REV__ENSG00000131435|ENST00000253754|PDLIM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.2721252441406	2	470.272158	938.529764	0.099415	4.6752E-05	-0.22805	-0.00010725	-0.12864	-6.0495E-05	470.2720226453988	92.144	2.4368	92.19	91.141	93.578	0.045456					134	57	4	0	0	0	0.76255	1	9614	9614		35.618	1.4457	1	1955400	+		58861	18952	39302	39318	66707	66707					0.05804009365908769
TPKLRKFW	8	Unmodified	_TPKLRKFW_					0	0	0		ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3267211914062	2	538.324194	1074.63383	3.4335	0.0018483	1.572	0.00084626	5.0055	0.0026946	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.79929	1	11218	11218		18.324	0.95945	1	75550000			58862	849	39303	39319	66708	66708					0.09950336193401199
TPKLTSRATRR	11	Unmodified	_TPKLTSRATRR_					0	0	0		nc|ENSG00000137337|Q14676-3|MDC1;ENSG00000137337|ENST00000376406|MDC1;nc|ENSG00000137337|Q14676-2|MDC1	nc|ENSG00000137337|Q14676-3|MDC1	nc|ENSG00000137337|Q14676-3|MDC1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4052124023438	2	643.88621	1285.75787	0.94336	0.00060742	-0.20039	-0.00012903	0.74297	0.00047839	643.8846112633894	106.19	0.12154	106.29	106.23	106.35	0.099007					4	2	2	0	0	0	0.17527	1	11348	11348		56.434	26.116	1	72308			58863	4191	39304	39320	66709	66709					0.12641762222892794
TPKNPVKRKDL	11	Unmodified	_TPKNPVKRKDL_					0	0	0		ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.39306640625	2	648.393336	1294.77212	-0.0023386	-1.5163E-06	-0.71325	-0.00046246	-0.71559	-0.00046398	648.3927201405174	107.38	1.0747	107.34	106.86	107.93	-0.034409					97	25	4	0	0	0	0.732	1	11709	11709		26.063	0.48933	1	36844000			58864	7635	39305	39321	66710	66710					0.13652414651232903
TPKNPVKRKDL	11	Unmodified	_TPKNPVKRKDL_					0	0	0		ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.392578125	2	648.393336	1294.77212	2.6473	0.0017165	-3.3608	-0.0021791	-0.7135	-0.00046263	648.3910621231973	107.28	1.1649	107.25	106.75	107.91	-0.034134					106	27	4	0	0	0	0.67762	1	11912	11912		35.178	8.1309	1	42480000			58865	7635	39305	39321	66711	66711					0.13652414651232903
TPKNPVKRKDL	11	Unmodified	_TPKNPVKRKDL_					0	0	0		ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3912353515625	2	648.393336	1294.77212	2.6472	0.0017164	-4.4234	-0.0028681	-1.7762	-0.0011516	648.3903126832247	116.06	1.0158	116.04	115.73	116.75	-0.024338					48	31	3	0	0	0	0.77762	1	12872	12872		16.007	0	1	114610			58866	7635	39305	39321	66712	66712					0.13652414651232903
TPKNPVKRKDL	11	Unmodified	_TPKNPVKRKDL_					0	0	0		ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.3930053710938	2	648.393336	1294.77212	1.8787	0.0012181	-2.609	-0.0016917	-0.73035	-0.00047355	648.3915145457087	107.1	1.2973	107.13	106.67	107.97	0.035622					111	30	4	0	0	0	0.71803	1	11748	11748		28.577	0.69449	1	42934000			58867	7635	39305	39321	66713	66713					0.13652414651232903
TPKNPVKRKDL	11	Unmodified	_TPKNPVKRKDL_					0	0	0		ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.59783935546875	3	432.597983	1294.77212	2.4108	0.0010429	-2.4605	-0.0010644	-0.04966	-2.1483E-05	432.5968710757986	107.1	1.2973	107.13	106.67	107.97	0.035622					60	30	2	0	0	0	0.73621	1	11808	11808		28.384	6.6033	1	18390000			58868	7635	39305	39321	66714	66714					0.13652414651232903
TPKNPVKRKDL	11	Unmodified	_TPKNPVKRKDL_					0	0	0		ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.392822265625	2	648.393336	1294.77212	1.6039	0.00104	-2.236	-0.0014498	-0.63213	-0.00040987	648.3917676742469	106.97	1.0935	107.11	106.64	107.73	0.13866					101	26	4	0	0	0	0.69931	1	11545	11545		31.634	0.10446	1	58516000			58869	7635	39305	39321	66715	66715					0.13652414651232903
TPKNPVKRKDL	11	Unmodified	_TPKNPVKRKDL_					0	0	0		ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3927001953125	2	648.393336	1294.77212	-1.1413	-0.00074001	0.67421	0.00043715	-0.46709	-0.00030286	648.3936534392657	107.12	0.99413	107.16	106.63	107.62	0.036118					92	23	4	0	0	0	0.732	1	11451	11451		26.063	0	1	53885000			58870	7635	39305	39321	66716	66716					0.13652414651232903
TPKNRKVT	8	Unmodified	_TPKNRKVT_					0	0	0		ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.28759765625	2	472.287808	942.561064	-0.97076	-0.00045848	0.82719	0.00039067	-0.14357	-6.7805E-05	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.88601	1	9553	9553		34.173	3.6689	1	26024000			58871	12347	39306	39322	66717	66717					0.08748582399982752
TPKNRKVT	8	Unmodified	_TPKNRKVT_					0	0	0		ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28778076171875	2	472.287808	942.561064	-0.108	-5.1006E-05	-0.19809	-9.3555E-05	-0.30609	-0.00014456	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.87064	7	10266	9929;9939;10035;10047;10083;10120;10266		37.159	7.4796	1	46909000			58872	12347	39306	39322	66718;66719;66720;66721;66722;66723;66724	66724					0.08748582399982752
TPKNRKVT	8	Unmodified	_TPKNRKVT_					0	0	0		ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28765869140625	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.8621	5	10228	10144;10192;10228;10252;10325		42.396	14.734	1	50843000			58873	12347	39306	39322	66725;66726;66727;66728;66729	66727					0.08748582399982752
TPKNRKVT	8	Unmodified	_TPKNRKVT_					0	0	0		ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2899169921875	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.06	1	117.04	116.54	117.54	-0.02433								0	0	0	0.29596	1	12965	12965		35.618	0	1				58874	12347	39306	39322	66730	66730					0.08748582399982752
TPKNRKVT	8	Unmodified	_TPKNRKVT_					0	0	0		ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28753662109375	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.8621	5	10042	10030;10042;10078;10102;10210		39.253	11.371	1	48574000			58875	12347	39306	39322	66731;66732;66733;66734;66735	66732					0.08748582399982752
TPKNRKVT	8	Unmodified	_TPKNRKVT_					0	0	0		ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2877197265625	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.87064	3	9893	9760;9784;9893		34.173	7.1897	1	50946000			58876	12347	39306	39322	66736;66737;66738	66738					0.08748582399982752
TPKNRKVT	8	Unmodified	_TPKNRKVT_					0	0	0		ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2876892089844	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.8621	6	9769	9709;9769;9781;9793;9817;9914		34.173	7.3764	1	48696000			58877	12347	39306	39322	66739;66740;66741;66742;66743;66744	66740					0.08748582399982752
TPKNRKVT	8	Unmodified	_TPKNRKVT_					0	0	0		ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2875061035156	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.88601	1	9680	9680		34.173	7.4796	1	40161000			58878	12347	39306	39322	66745	66745					0.08748582399982752
TPKNRKVT	8	Unmodified	_TPKNRKVT_					0	0	0		ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	ENST00000476929.1_1_3:190235673-190238299:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2876892089844	2	472.287808	942.561064	1.4182	0.00066978	-1.3444	-0.00063493	0.07378	3.4846E-05	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.8621	7	11417	11297;11308;11369;11393;11405;11417;11514		47.657	8.4045	1	21289000			58879	12347	39306	39322	66746;66747;66748;66749;66750;66751;66752	66751					0.08748582399982752
TPKPAPLCL	9	Unmodified	_TPKPAPLCL_					0	0	0			REV__ENST00000533820.5_1_11:64979162-64979339:+|nuORF	REV__ENST00000533820.5_1_11:64979162-64979339:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.27191162109375	2	470.270238	938.525924	0.69739	0.00032796	3.3815	0.0015902	4.0789	0.0019182	470.2717761018985	92.152	2.8924	92.309	91.308	94.201	0.15649					149	68	4	0	0	0	0.78983	1	9346	9346		27.882	2.4321	1	1938200	+		58880	28359	39307	39323	66753	66753					0.05420203547816982
TPKPLAPAPL	10	Unmodified	_TPKPLAPAPL_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8138122558594	2	502.810585	1003.60662	2.3403	0.0011767	3.7237	0.0018723	6.064	0.003049	502.8125095454433	97.334	3.7238	97.279	96.672	100.4	-0.055542					261	86	6	0	0	0	0.6116	2	10462	10462;10548		49.442	8.8689	1	22474000			58881	1679	39308	39324	66754;66755	66754					0.10495807862366746
TPKQRITAS	9	Unmodified	_TPKQRITAS_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.290771484375	2	501.290548	1000.56654	-0.97974	-0.00049113	0.89004	0.00044617	-0.089695	-4.4963E-05	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.64555	2	8105	8057;8105		44.377	7.2972	1	2111000			58882	4237	39309	39325	66756;66757	66757					0.06628261191781348
TPKQRITAS	9	Unmodified	_TPKQRITAS_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2903137207031	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.75725	2	9061	8751;9061		36.447	3.6343	1	9565500			58883	4237	39309	39325	66758;66759	66759					0.06628261191781348
TPKQRITAS	9	Unmodified	_TPKQRITAS_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29022216796875	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.78528	2	8680	8680;8717		29.17	3.596	1	2850500			58884	4237	39309	39325	66760;66761	66760					0.06628261191781348
TPKQRITAS	9	Unmodified	_TPKQRITAS_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904052734375	2	501.290548	1000.56654	-0.52378	-0.00026256	0.16738	8.3908E-05	-0.35639	-0.00017866	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.77696	1	8501	8501		31.53	1.0262	1	2929300			58885	4237	39309	39325	66762	66762					0.06628261191781348
TPKQRITAS	9	Unmodified	_TPKQRITAS_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904357910156	2	501.290548	1000.56654	-0.36653	-0.00018374	0.15869	7.9552E-05	-0.20784	-0.00010419	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.75725	1	9236	9236		36.447	4.9169	1	9903700			58886	4237	39309	39325	66763	66763					0.06628261191781348
TPKQRITAS	9	Unmodified	_TPKQRITAS_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2899169921875	2	501.290548	1000.56654	0.65622	0.00032896	-1.0593	-0.000531	-0.40304	-0.00020204	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.75725	1	8271	8271		36.447	4.9169	1	2931000			58887	4237	39309	39325	66764	66764					0.06628261191781348
TPKQRITAS	9	Unmodified	_TPKQRITAS_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904357910156	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.71772	4	8837	8534;8825;8837;8849		39.253	10.103	1	9566900			58888	4237	39309	39325	66765;66766;66767;66768	66767					0.06628261191781348
TPKQRITAS	9	Unmodified	_TPKQRITAS_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2898864746094	2	501.290548	1000.56654	-0.86867	-0.00043546	0.96116	0.00048182	0.092492	4.6365E-05	501.29090253858425	84.241	3.0988	84.677	82.636	85.735	0.43538					220	75	4	0	0	0	0.71772	1	9885	9885		39.253	2.0937	1	2445400			58889	4237	39309	39325	66769	66769					0.06628261191781348
TPKQRITAS	9	Unmodified	_TPKQRITAS_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29034423828125	2	501.290548	1000.56654	-0.28392	-0.00014233	0.039079	1.959E-05	-0.24484	-0.00012274	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.77696	2	9946	9946;9957		31.53	3.6476	1	9038000			58890	4237	39309	39325	66770;66771	66770					0.06628261191781348
TPKQRITAS	9	Unmodified	_TPKQRITAS_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2902526855469	2	501.290548	1000.56654	0.16565	8.304E-05	-0.064258	-3.2212E-05	0.10139	5.0828E-05	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.77696	1	9918	9918		31.53	2.3803	1	2717900			58891	4237	39309	39325	66772	66772					0.06628261191781348
TPKQRITAS	9	Unmodified	_TPKQRITAS_					0	0	0		ENSG00000137809|ENST00000315757|ITGA11;nc|ENSG00000137809|Q9UKX5-2|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.29034423828125	2	501.290548	1000.56654	-0.45423	-0.0002277	0.14645	7.3413E-05	-0.30779	-0.00015429	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.58668	4	10156	10096;10156;10192;10216		47.657	3.6345	1	9727400			58892	4237	39309	39325	66773;66774;66775;66776	66774					0.06628261191781348
TPKREKKG	8	Unmodified	_TPKREKKG_					0	0	0			REV__ENSG00000249662|ENST00000638486|LINC02218	REV__ENSG00000249662|ENST00000638486|LINC02218	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2875671386719	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.8347	1	10349	10349		23.042	1.0826	1	50843000	+		58893	23866	39310	39326	66777	66777					0.0874858239999412
TPKSAILV	8	Unmodified	_TPKSAILV_					0	0	0		nc|ENSG00000078018|P11137-3|MAP2;ENSG00000078018|ENST00000682079|MAP2;nc|ENSG00000078018|P11137-2|MAP2;nc|ENSG00000078018|P11137-4|MAP2	nc|ENSG00000078018|P11137-3|MAP2;nc|ENSG00000078018|P11137-4|MAP2	nc|ENSG00000078018|P11137-4|MAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	414.76171875	2	414.763104	827.511654	-1.8105	-0.00075094	-1.5324	-0.00063559	-3.343	-0.0013865	414.7624144330171	88.215	3.3838	88.416	87.026	90.41	0.20114					235	79	5	0	0	0	0.87479	1	8778	8778		30.504	2.2494	1	11466000			58894	1389;14783	39311	39327	66778	66778					0.09099874391176854
TPKSEKKS	8	Unmodified	_TPKSEKKS_					0	0	0		ENSG00000163961|ENST00000318037|RNF168	ENSG00000163961|ENST00000318037|RNF168	ENSG00000163961|ENST00000318037|RNF168	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.9483947753906	2	452.758549	903.502546	2.7595	0.0012494	-1.582	-0.00071628	1.1775	0.00053312	452.7576603527835	107.37	0.66629	107.33	106.97	107.64	-0.034134					27	15	2	0	0	0	0.4196	1	11928	11928		7.1934	1.6355	1	137180			58895	5895	39312	39328	66779	66779					0.046934810348602696
TPKSPSTDI	9	Unmodified	_TPKSPSTDI_					0	0	0		nc|ENSG00000144366|Q9UBP9-3|GULP1;nc|ENSG00000144366|Q9UBP9-4|GULP1;ENSG00000144366|ENST00000409830|GULP1	nc|ENSG00000144366|Q9UBP9-3|GULP1	nc|ENSG00000144366|Q9UBP9-3|GULP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.2478942871094	2	473.248015	944.481476	0.34188	0.00016179	-0.18615	-8.8093E-05	0.15574	7.3701E-05	473.24782054202086	28.883	1.4946	28.914	28.31	29.804	0.030945					99	51	4	0	0	0	0.26953	1	1402	1402		67.494	1.5962	1	514570			58896	4704	39313	39329	66780	66780					0.007014709353256876
TPKTVRKN	8	Unmodified	_TPKTVRKN_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2876281738281	2	472.287808	942.561064	-0.97076	-0.00045848	0.82719	0.00039067	-0.14357	-6.7805E-05	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.8621	9	9493	9481;9493;9505;9517;9529;9541;9577;9589;9601		42.396	11.892	1	26024000			58897	7133	39314	39330	66781;66782;66783;66784;66785;66786;66787;66788;66789	66782					0.0874858239999412
TPKTVRKN	8	Unmodified	_TPKTVRKN_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28753662109375	2	472.287808	942.561064	-0.108	-5.1006E-05	-0.19809	-9.3555E-05	-0.30609	-0.00014456	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.82658	9	9919	9919;9951;9999;10108;10156;10192;10204;10289;10314		42.396	11.709	1	46909000			58898	7133	39314	39330	66790;66791;66792;66793;66794;66795;66796;66797;66798	66790					0.0874858239999412
TPKTVRKN	8	Unmodified	_TPKTVRKN_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2877197265625	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.8621	13	10337	10124;10156;10168;10180;10204;10216;10265;10277;10289;10337;10361;10454;10589		40.778	12.56	1	50843000			58899	7133	39314	39330	66799;66800;66801;66802;66803;66804;66805;66806;66807;66808;66809;66810;66811	66808					0.0874858239999412
TPKTVRKN	8	Unmodified	_TPKTVRKN_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2875061035156	2	472.287808	942.561064	2.4783	0.0011705	-1.6779	-0.00079243	0.80042	0.00037803	472.28709322712206	99.355	1.7964	99.301	98.824	100.62	-0.053734					80	41	2	0	0	0	0.82658	1	10830	10830		21.96	2.5999	1	447940			58900	7133	39314	39330	66812	66812					0.0874858239999412
TPKTVRKN	8	Unmodified	_TPKTVRKN_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2877197265625	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.8621	12	10138	10007;10054;10090;10138;10150;10186;10198;10222;10259;10315;10350;10387		44.377	12.847	1	48574000			58901	7133	39314	39330	66813;66814;66815;66816;66817;66818;66819;66820;66821;66822;66823;66824	66816					0.0874858239999412
TPKTVRKN	8	Unmodified	_TPKTVRKN_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2877197265625	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.84579	7	9857	9688;9712;9724;9772;9857;9929;9967		34.173	7.3764	1	50946000			58902	7133	39314	39330	66825;66826;66827;66828;66829;66830;66831	66829					0.0874858239999412
TPKTVRKN	8	Unmodified	_TPKTVRKN_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28765869140625	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.8621	6	10047	9698;9733;9757;9877;10024;10047		39.253	7.0106	1	48696000			58903	7133	39314	39330	66832;66833;66834;66835;66836;66837	66837					0.0874858239999412
TPKTVRKN	8	Unmodified	_TPKTVRKN_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.28741455078125	2	472.287808	942.561064	-1.7052	-0.00080536	1.4554	0.00068739	-0.24979	-0.00011798	472.28842522332354	95.134	4.1348	95.336	94.735	98.87	0.20242					282	96	6	0	0	0	0.8621	9	9692	9656;9668;9692;9704;9740;9777;9790;9802;9994		42.396	7.3764	1	40161000			58904	7133	39314	39330	66838;66839;66840;66841;66842;66843;66844;66845;66846	66840					0.0874858239999412
TPKTVRKN	8	Unmodified	_TPKTVRKN_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2880554199219	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.90523	3	12132	12096;12132;12160		47.657	5.2612	1	3080300			58905	7133	39314	39330	66847;66848;66849	66848					0.0874858239999412
TPKTVRKN	8	Unmodified	_TPKTVRKN_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2874755859375	2	472.287808	942.561064	1.4182	0.00066978	-1.3444	-0.00063493	0.07378	3.4846E-05	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.87792	5	11357	11320;11333;11357;11381;11466		45.972	20.398	1	21289000			58906	7133	39314	39330	66850;66851;66852;66853;66854	66852					0.0874858239999412
TPKTVRKN	8	Unmodified	_TPKTVRKN_					0	0	0		nc|ENSG00000177324|Q8NDZ0-2|BEND2;ENSG00000177324|ENST00000380033|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	nc|ENSG00000177324|Q8NDZ0-2|BEND2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.28802490234375	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.87792	6	11376	11376;11389;11413;11425;11437;11510		45.972	15.469	1	24731000			58907	7133	39314	39330	66855;66856;66857;66858;66859;66860	66855					0.0874858239999412
TPKVAIIQTY	10	Unmodified	_TPKVAIIQTY_					0	0	0			REV__ENSG00000138375|ENST00000357276|SMARCAL1	REV__ENSG00000138375|ENST00000357276|SMARCAL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3299560546875	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.86409	1	9060	9060		25.126	1.6033	1	11042000	+		58908	19463	39315	39331	66861	66861					0.0881915819995811
TPKVAIIQTY	10	Unmodified	_TPKVAIIQTY_					0	0	0			REV__ENSG00000138375|ENST00000357276|SMARCAL1	REV__ENSG00000138375|ENST00000357276|SMARCAL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.331882	1132.64921	0.48094	0.00027285	-3.8594	-0.0021896	-3.3785	-0.0019167	567.3295668192613	90.267	3.0607	90.479	88.437	91.497	0.21271					287	73	5	0	0	0	0.86338	1	8992	8992		31.634	0.10446	1	6590100	+		58909	19463	39315	39331	66862	66862					0.0881915819995811
TPKVAIIQTY	10	Unmodified	_TPKVAIIQTY_					0	0	0			REV__ENSG00000138375|ENST00000357276|SMARCAL1	REV__ENSG00000138375|ENST00000357276|SMARCAL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3297729492188	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86338	2	9573	9573;9624		31.634	6.1841	1	17338000	+		58910	19463	39315	39331	66863;66864	66863					0.0881915819995811
TPKVAIIQTY	10	Unmodified	_TPKVAIIQTY_					0	0	0			REV__ENSG00000138375|ENST00000357276|SMARCAL1	REV__ENSG00000138375|ENST00000357276|SMARCAL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3302612304688	2	567.331882	1132.64921	1.2029	0.00068247	-3.4414	-0.0019524	-2.2385	-0.00127	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.81117	1	10564	10564		38.754	2.3069	1	4990000	+		58911	19463	39315	39331	66865	66865					0.0881915819995811
TPKVAIIQTY	10	Unmodified	_TPKVAIIQTY_					0	0	0			REV__ENSG00000138375|ENST00000357276|SMARCAL1	REV__ENSG00000138375|ENST00000357276|SMARCAL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3298950195312	2	567.331882	1132.64921	-0.50942	-0.00028901	-1.8517	-0.0010506	-2.3612	-0.0013396	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.86587	1	10810	10810		29.17	0.020503	1	5685000	+		58912	19463	39315	39331	66866	66866					0.0881915819995811
TPKVENVRL	9	Unmodified	_TPKVENVRL_					0	0	0		nc|ENSG00000003987|Q9Y216-2|MTMR7;ENSG00000003987|ENST00000180173|MTMR7	nc|ENSG00000003987|Q9Y216-2|MTMR7	nc|ENSG00000003987|Q9Y216-2|MTMR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.3133544921875	2	528.314023	1054.61349	2.8563	0.001509	-2.641	-0.0013953	0.2152	0.0001137	528.3126813461913	98.458	1.2186	98.403	97.86	99.078	-0.054825					71	27	4	0	0	0	0.7932	1	10638	10638		26.693	1.1189	1	423590			58913	658	39316	39332	66867	66867					0.08837120742941806
TPKVENVRL	9	Unmodified	_TPKVENVRL_					0	0	0		nc|ENSG00000003987|Q9Y216-2|MTMR7;ENSG00000003987|ENST00000180173|MTMR7	nc|ENSG00000003987|Q9Y216-2|MTMR7	nc|ENSG00000003987|Q9Y216-2|MTMR7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	528.3135986328125	2	528.314023	1054.61349	0.80818	0.00042697	-0.51596	-0.00027259	0.29222	0.00015439	528.3138274474713	98.246	1.1968	98.407	97.84	99.037	0.16074					66	26	4	0	0	0	0.76764	1	10221	10221		34.173	7.1252	1	380980			58914	658	39316	39332	66868	66868					0.08837120742941806
TPKYKLGPK	9	Unmodified	_TPKYKLGPK_					0	0	0			REV__ENSG00000264006|ENST00000648824|AKR1C8	REV__ENSG00000264006|ENST00000648824|AKR1C8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3139038085938	2	516.316035	1030.61752	-0.25799	-0.00013321	-4.1781	-0.0021572	-4.4361	-0.0022904	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.77696	1	10658	10658		31.53	1.0262	1	82226000	+		58915	23955	39317	39333	66869	66869					0.10343210236646883
TPLAKRRKRQV	11	Unmodified	_TPLAKRRKRQV_					0	0	0			REV__nc|ENSG00000077150|Q00653-4|NFKB2	REV__nc|ENSG00000077150|Q00653-4|NFKB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.6251220703125	3	451.624755	1351.85244	0.25395	0.00011469	-0.96533	-0.00043596	-0.71138	-0.00032128	451.62419829630386	45.115	0.78364	45.164	44.861	45.645	0.048996					33	18	2	0	0	0	0.77205	1	3259	3259		17.167	1.8293	1	93515	+		58916	16736	39318	39334	66870	66870					0.19058320764906966
TPLAPLSL	8	Unmodified	_TPLAPLSL_					0	0	0		ENST00000495532.1_1_6:32975562-32975865:-|nuORF	ENST00000495532.1_1_6:32975562-32975865:-|nuORF	ENST00000495532.1_1_6:32975562-32975865:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2477722167969	2	406.249829	810.485105	-1.791	-0.00072759	-1.0283	-0.00041774	-2.8193	-0.0011453	406.2492919418848	111.27	0.62435	111.39	111.04	111.66	0.11118					49	21	3	0	0	0	0.884	1	12012	12012		33.516	5.2613	1	128170			58917	12768	39319	39335	66871	66871					0.07228185499855044
TPLASISRTYY	11	Unmodified	_TPLASISRTYY_					0	0	0			REV__ENSG00000104450|ENST00000388798|SPAG1;REV__nc|ENSG00000104450|Q07617-2|SPAG1	REV__ENSG00000104450|ENST00000388798|SPAG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.5609130859375	3	424.559194	1270.65575	-0.25982	-0.00011031	4.0115	0.0017031	3.7517	0.0015928	424.5609168516135	27.601	1.5742	27.504	27.094	28.669	-0.096945					107	36	4	0	0	0	0.71803	1	1612	1612		28.577	4.0575	1	4915400	+		58918	17459;29753	39320	39336	66872	66872					0.03125051360689213
TPLCFERRRKY	11	Unmodified	_TPLCFERRRKY_					0	0	0			REV__ENST00000330753.5_1_14:86087483-86087684:+|nuORF	REV__ENST00000330753.5_1_14:86087483-86087684:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	490.26385498046875	3	490.266239	1467.77689	-0.4909	-0.00024067	-2.6525	-0.0013004	-3.1434	-0.0015411	490.2647507238825	67.55	0.6627	67.514	67.155	67.817	-0.035698					51	27	3	0	0	0	0.76579	1	6484	6484		18.531	1.3643	1	98925	+		58919	25117	39321	39337	66873	66873					0.06170975522331901
TPLDRVTEF	9	Unmodified	_TPLDRVTEF_					0	0	0		ENSG00000163320|ENST00000482016|CGGBP1;chr3:88058223-88140970|54|18.63|0.56|5.07|-|ENST00000462901|CGGBP1,CGGBP1	ENSG00000163320|ENST00000482016|CGGBP1	ENSG00000163320|ENST00000482016|CGGBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.2803955078125	2	539.282389	1076.55022	-1.3286	-0.00071648	1.3012	0.00070169	-0.02742	-1.4787E-05	539.2828341074548	58.89	0.83183	59.282	58.736	59.568	0.39209					32	19	2	0	0	0	0.16822	1	6176	6176		80.455	14.025	1	737190			58920	410	39322	39338	66874	66874					0.01501135235048423
TPLDRVTEF	9	Unmodified	_TPLDRVTEF_					0	0	0		ENSG00000163320|ENST00000482016|CGGBP1;chr3:88058223-88140970|54|18.63|0.56|5.07|-|ENST00000462901|CGGBP1,CGGBP1	ENSG00000163320|ENST00000482016|CGGBP1	ENSG00000163320|ENST00000482016|CGGBP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	539.282389	1076.55022	-0.50008	-0.00026969	0.73125	0.00039435	0.23117	0.00012467	539.2825485620351	58.74	0.82052	59.293	58.795	59.615	0.55323	0.005249	-0.00035482	NaN	80.455	33	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	559410			58921	410	39322	39338							0.01501135235048423
TPLESSQSL	9	Unmodified	_TPLESSQSL_					0	0	0		ENST00000218176.3_1_X:48826984-48827014:-|nuORF	ENST00000218176.3_1_X:48826984-48827014:-|nuORF	ENST00000218176.3_1_X:48826984-48827014:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.2450866699219	2	481.245472	960.476391	0.38849	0.00018696	-0.36028	-0.00017338	0.028207	1.3575E-05	481.24516301016575	28.416	0.69288	28.452	28.16	28.853	0.03607					51	22	3	0	0	0	0.28163	1	1363	1363		66.429	14.13	1	267010			58922	9155	39323	39339	66875	66875					-0.005428329272717747
TPLESSQSL	9	Unmodified	_TPLESSQSL_					0	0	0		ENST00000218176.3_1_X:48826984-48827014:-|nuORF	ENST00000218176.3_1_X:48826984-48827014:-|nuORF	ENST00000218176.3_1_X:48826984-48827014:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2461242675781	2	481.245472	960.476391	-0.99487	-0.00047878	0.93546	0.00045018	-0.059413	-2.8592E-05	481.24577626446245	28.501	1.0301	28.479	28.021	29.051	-0.02207					50	27	3	0	0	0	0.55097	1	1401	1401		49.442	1.7842	1	305280			58923	9155	39323	39339	66876	66876					-0.005428329272717747
TPLEVPFPQ	9	Unmodified	_TPLEVPFPQ_					0	0	0		ENSG00000196531|ENST00000454682|NACA;nc|ENSG00000196531|E9PAV3-2|NACA	ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.2188110351562	2	514.276575	1026.5386	-0.71195	-0.00036614	-3.2015	-0.0016464	-3.9134	-0.0020126	514.2748281071578	30.194	0.4865	30.223	29.964	30.45	0.028618					14	10	2	0	0	0	0.20789	1	1949	1949		27.882	0	1	107520			58924	8069	39324	39340	66877	66877					0.026389382117031346
TPLGTVIALF	10	Unmodified	_TPLGTVIALF_					0	0	0		nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;ENSG00000253537|ENST00000518325|PCDHGA7	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3139038085938	2	516.310418	1030.60628	3.0984	0.0015997	4.0844	0.0021088	7.1828	0.0037085	516.3124899317548	102.33	1.1091	102.29	101.92	103.03	-0.047005					68	26	3	0	0	0	0.85934	1	11142	11142		35.618	6.4687	1	756390			58925	8861	39325	39341	66878	66878					0.09220388142489355
TPLHLLTHT	9	Unmodified	_TPLHLLTHT_					0	0	0		ENST00000572440.1_1_17:44055640-44055811:+|nuORF;ENST00000576518.1_1_17:44055640-44101534:+|nuORF	ENST00000572440.1_1_17:44055640-44055811:+|nuORF	ENST00000572440.1_1_17:44055640-44055811:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.79345703125	2	516.795466	1031.57638	-0.83709	-0.0004326	-3.0347	-0.0015683	-3.8718	-0.0020009	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.78058	1	8584	8584		30.504	3.8107	1	490270			58926	14011	39326	39342	66879	66879					0.061854491971644165
TPLIVIIVLA	10	Unmodified	_TPLIVIIVLA_					0	0	0		nc|ENSG00000136099|O95206-2|PCDH8;ENSG00000136099|ENST00000377942|PCDH8	nc|ENSG00000136099|O95206-2|PCDH8	nc|ENSG00000136099|O95206-2|PCDH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3606567382812	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.8488	1	2529	2529		17.365	0	1	781950			58927	4086	39327	39343	66880	66880					0.1819441110740172
TPLIVIIVLA	10	Unmodified	_TPLIVIIVLA_					0	0	0		nc|ENSG00000136099|O95206-2|PCDH8;ENSG00000136099|ENST00000377942|PCDH8	nc|ENSG00000136099|O95206-2|PCDH8	nc|ENSG00000136099|O95206-2|PCDH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3612060546875	2	526.359911	1050.70527	0.23622	0.00012434	2.2547	0.0011868	2.4909	0.0013111	526.3609415708197	35.175	1.5308	35.281	34.617	36.148	0.10604					147	55	3	0	0	0	0.8488	1	1873	1873		17.365	5.1581	1	1065400			58928	4086	39327	39343	66881	66881					0.1819441110740172
TPLIVIIVLA	10	Unmodified	_TPLIVIIVLA_					0	0	0		nc|ENSG00000136099|O95206-2|PCDH8;ENSG00000136099|ENST00000377942|PCDH8	nc|ENSG00000136099|O95206-2|PCDH8	nc|ENSG00000136099|O95206-2|PCDH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3613891601562	2	526.359911	1050.70527	1.3753	0.00072391	1.3078	0.00068837	2.6831	0.0014123	526.3604424502926	34.187	1.5135	34.492	34.159	35.672	0.30494					130	37	5	0	0	0	0.86201	1	2582	2582		24.203	0	1	5570700			58929	4086	39327	39343	66882	66882					0.1819441110740172
TPLKPPVPNL	10	Unmodified	_TPLKPPVPNL_					0	0	0		ENSG00000113615|ENST00000398844|SEC24A;nc|ENSG00000113615|O95486-2|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.326416015625	2	538.329142	1074.64373	-0.51595	-0.00027775	-2.4109	-0.0012978	-2.9268	-0.0015756	538.3278592314944	105.99	1.6493	105.99	105.37	107.02	0					100	37	3	0	0	0	0.85834	1	10973	10973		22.58	0.61977	1	642860			58930	2733	39328	39344	66883	66883					0.10939479408125408
TPLLLLDAPV	10	Unmodified	_TPLLLLDAPV_					0	0	0			REV__ENST00000272163.8_1_1:225609792-225609867:-|nuORF	REV__ENST00000272163.8_1_1:225609792-225609867:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.7598266601562	2	526.323525	1050.6325	0.27403	0.00014423	2.3335	0.0012282	2.6075	0.0013724	526.3246553150902	57.137	1.2946	57.109	56.645	57.94	-0.028664					50	39	2	0	0	0	0.37624	1	5360	5360		15.642	3.435	1	98844	+		58931	24541	39329	39345	66884	66884					0.10920657313999982
TPLLLPRNRQ	10	Unmodified	_TPLLLPRNRQ_					0	0	0		ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.366455078125	2	604.367121	1206.71969	3.2045	0.0019367	-4.3338	-0.0026192	-1.1294	-0.00068255	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.86763	1	11486	11486		26.693	5.746	1	63446000			58932	3562	39330	39346	66885	66885					0.12459876308253115
TPLLLPRNRQ	10	Unmodified	_TPLLLPRNRQ_					0	0	0		ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.2467956542969	3	403.247173	1206.71969	-1.7912	-0.0007223	1.0466	0.00042203	-0.74462	-0.00030027	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.85466	1	11125	11125		14.694	0	1	20673000			58933	3562	39330	39346	66886	66886					0.12459876308253115
TPLLLPRNRQ	10	Unmodified	_TPLLLPRNRQ_					0	0	0		ENSG00000128829|ENST00000263791|EIF2AK4;nc|ENSG00000128829|Q9P2K8-2|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	ENSG00000128829|ENST00000263791|EIF2AK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3663940429688	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.86763	1	12723	12723		26.693	0	1	5984800			58934	3562	39330	39346	66887	66887					0.12459876308253115
TPLMVAVLN	9	Unmodified	_TPLMVAVLN_					0	0	0		ENST00000477963.1_1_10:127693411-127697721:+|nuORF;ENST00000492670.5_1_10:127677150-127697871:+|nuORF;nc|ENSG00000203780|Q8TC84-2|FANK1;ENSG00000203780|ENST00000368693|FANK1;nc|ENSG00000203780|Q8TC84-3|FANK1	ENST00000477963.1_1_10:127693411-127697721:+|nuORF	ENST00000477963.1_1_10:127693411-127697721:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2775573730469	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.51307	1	10181	10181		51.335	12.083	1	5642300			58935	8393	39331	39347	66888	66888					0.05648186202245142
TPLMVAVLN	9	Unmodified	_TPLMVAVLN_					0	0	0		ENST00000477963.1_1_10:127693411-127697721:+|nuORF;ENST00000492670.5_1_10:127677150-127697871:+|nuORF;nc|ENSG00000203780|Q8TC84-2|FANK1;ENSG00000203780|ENST00000368693|FANK1;nc|ENSG00000203780|Q8TC84-3|FANK1	ENST00000477963.1_1_10:127693411-127697721:+|nuORF	ENST00000477963.1_1_10:127693411-127697721:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2772216796875	2	479.275521	956.536489	1.0158	0.00048684	3.1082	0.0014897	4.1239	0.0019765	479.27692974068503	87.133	2.5482	87.579	87.224	89.772	0.44629					117	61	3	0	0	0	0.69624	1	10216	10216		40.778	3.6191	1	776520			58936	8393	39331	39347	66889	66889					0.05648186202245142
TPLNSLRR	8	Unmodified	_TPLNSLRR_					0	0	0			REV__nc|ENSG00000163939|Q86U86-7|PBRM1	REV__nc|ENSG00000163939|Q86U86-7|PBRM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.785888671875	2	478.785433	955.556313	1.6863	0.00080739	-2.1808	-0.0010441	-0.49447	-0.00023675	478.78443593268145	92.331	1.6378	92.266	91.688	93.326	-0.06414					85	38	3	0	0	0	0.86677	1	9782	9782		27.882	0	1	793300	+		58937	21000	39332	39348	66890	66890					0.07675698257230579
TPLPLRGTSRW	11	Unmodified	_TPLPLRGTSRW_					0	0	0		ENST00000366847.8_1_6:167461254-167461356:+|nuORF	ENST00000366847.8_1_6:167461254-167461356:+|nuORF	ENST00000366847.8_1_6:167461254-167461356:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.3639526367188	2	642.364579	1282.7146	-1.1501	-0.00073879	-2.5884	-0.0016627	-3.7385	-0.0024015	642.364177403599	111.36	0.50385	111.34	111.22	111.72	-0.019882					60	18	5	0	0	0	0.77061	1	11861	11861		17.468	0	1	9278200			58938	10521	39333	39349	66891	66891					0.08455572445632242
TPLPPKTRL	9	Unmodified	_TPLPPKTRL_					0	0	0		ENST00000589123.5_2_19:3464463-3465009:+|nuORF	ENST00000589123.5_2_19:3464463-3465009:+|nuORF	ENST00000589123.5_2_19:3464463-3465009:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.8207092285156	2	511.821484	1021.62842	0.41163	0.00021068	-1.6694	-0.00085442	-1.2577	-0.00064374	511.82049110618453	79.343	0.76666	79.892	79.615	80.382	0.54945					45	17	3	0	0	0	0.69624	1	9132	9132		40.778	5.1599	1	1191300			58939	14227	39334	39350	66892	66892					0.11846612610929697
TPLPTHVH	8	Unmodified	_TPLPTHVH_					0	0	0			REV__ENSG00000062096|ENST00000381127|ARSF	REV__ENSG00000062096|ENST00000381127|ARSF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.7491760253906	2	451.248152	900.481751	-1.5029	-0.0006782	3.2139	0.0014503	1.711	0.00077208	451.24948444631724	65.955	1.2112	65.955	65.412	66.623	0					127	65	2	0	0	0	0.85277	1	5866	5866		25.45	6.0902	1	815400	+		58940	16459	39335	39351	66893	66893					0.02752935445857929
TPLPTLHSLPK	11	Unmodified	_TPLPTLHSLPK_					0	0	0		ENST00000571138.5_1_17:5014814-5017504:+|nuORF	ENST00000571138.5_1_17:5014814-5017504:+|nuORF	ENST00000571138.5_1_17:5014814-5017504:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	603.3214721679688	2	602.358431	1202.70231	-1.2818	-0.0007721	-2.0443	-0.0012314	-3.3261	-0.0020035	602.3569707472302	98.397	0.35764	98.593	98.332	98.69	0.19585					14	7	2	0	0	0	0.17643	1	10115	10115		5.2201	0	1	36892			58941	13997	39336	39352	66894	66894					0.1090653598262179
TPLSTLSLKH	10	Unmodified	_TPLSTLSLKH_					0	0	0		nc|ENSG00000004487|O60341|KDM1A;ENSG00000004487|ENST00000400181|KDM1A	nc|ENSG00000004487|O60341|KDM1A	nc|ENSG00000004487|O60341|KDM1A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.7973022460938	2	548.821681	1095.62881	-0.21316	-0.00011699	3.4566	0.001897	3.2434	0.0017801	548.8234459677735	54.93	0.42162	55.498	55.278	55.7	0.56836					17	9	2	0	0	0	0.37624	1	5637	5637		37.812	12.237	1	226080			58942	661	39337	39353	66895	66895					0.08481987540153568
TPLTELIL	8	Unmodified	_TPLTELIL_					0	0	0			REV__ENSG00000165916|ENST00000298852|PSMC3	REV__ENSG00000165916|ENST00000298852|PSMC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2748107910156	2	450.276044	898.537535	-0.14122	-6.3587E-05	-3.5809	-0.0016124	-3.7221	-0.001676	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.86288	1	9821	9821		26.796	2.5934	1	47650000	+		58943	21233	39338	39354	66896	66896					0.08420723842812095
TPLTELIL	8	Unmodified	_TPLTELIL_					0	0	0			REV__ENSG00000165916|ENST00000298852|PSMC3	REV__ENSG00000165916|ENST00000298852|PSMC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.27471923828125	2	450.276044	898.537535	0.68452	0.00030823	-4.3919	-0.0019776	-3.7074	-0.0016694	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.91005	1	9591	9591		42.474	12.633	1	41438000	+		58944	21233	39338	39354	66897	66897					0.08420723842812095
TPLTELIL	8	Unmodified	_TPLTELIL_					0	0	0			REV__ENSG00000165916|ENST00000298852|PSMC3	REV__ENSG00000165916|ENST00000298852|PSMC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.276123046875	2	450.276044	898.537535	-0.39172	-0.00017638	-2.9008	-0.0013062	-3.2926	-0.0014826	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.91005	1	11282	11282		42.474	3.453	1	19085000	+		58945	21233	39338	39354	66898	66898					0.08420723842812095
TPLTLLLSQTL	11	Unmodified	_TPLTLLLSQTL_					0	0	0		ENST00000518071.5_3_8:102190478-102212227:-|nuORF	ENST00000518071.5_3_8:102190478-102212227:-|nuORF	ENST00000518071.5_3_8:102190478-102212227:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.5802307128906	3	400.579706	1198.71729	-0.18599	-7.4504E-05	2.0572	0.00082408	1.8712	0.00074958	400.5804645798546	111.38	0.175	111.32	111.2	111.37	-0.059937					8	4	2	0	0	0	0.6396	1	12117	12117		39.873	6.8338	1	1049500			58946	13112	39339	39355	66899	66899					0.1258798305993878
TPLTLLLSQTL	11	Unmodified	_TPLTLLLSQTL_					0	0	0		ENST00000518071.5_3_8:102190478-102212227:-|nuORF	ENST00000518071.5_3_8:102190478-102212227:-|nuORF	ENST00000518071.5_3_8:102190478-102212227:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5801086425781	3	400.579706	1198.71729	3.4047	0.0013639	-1.6398	-0.00065689	1.7649	0.00070698	400.578997947783	111.61	0.85251	111.65	111	111.85	0.041832					50	28	2	0	0	0	0.69071	1	13523	13523		33.039	6.2897	1	3662700			58947	13112	39339	39355	66900	66900					0.1258798305993878
TPLTLTRAS	9	Unmodified	_TPLTLTRAS_					0	0	0		ENST00000394321.9_1_19:7592406-7592778:+|nuORF	ENST00000394321.9_1_19:7592406-7592778:+|nuORF	ENST00000394321.9_1_19:7592406-7592778:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.28106689453125	2	480.279649	958.544745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.265	1	26.311	25.811	26.811	0.045507								0	0	0	0.31738	1	1098	1098		24.519	0.31644	1				58948	11066	39340	39356	66901	66901					0.06381456443239131
TPLTSRRI	8	Unmodified	_TPLTSRRI_					0	0	0			REV__ENST00000488252.6_1_19:19287863-19288136:-|nuORF	REV__ENST00000488252.6_1_19:19287863-19288136:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2864685058594	2	472.287808	942.561064	2.6574	0.0012551	-1.436	-0.00067818	1.2214	0.00057688	472.2874126240724	101.11	0.90861	101.06	100.58	101.49	-0.052116					38	21	2	0	0	0	0.87922	1	10993	10993		31.955	2.8053	1	193790	+		58949	27590	39341	39357	66902	66902					0.08748582399982752
TPLVLKTT	8	Unmodified	_TPLVLKTT_					0	0	0			REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	REV__nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.7747497558594	2	436.776211	871.537869	-0.99178	-0.00043318	-2.1014	-0.00091785	-3.0932	-0.001351	436.7752083239027	90.559	2.3196	91.029	90.562	92.882	0.47068					153	55	5	0	0	0	0.84341	1	10804	10804		24.203	1.1603	1	11924000	+		58950	23273	39342	39358	66903	66903					0.09696143562666748
TPLWLLLSRL	10	Unmodified	_TPLWLLLSRL_					0	0	0		ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.5892333984375	3	404.588536	1210.74378	-1.9042	-0.00077041	3.5707	0.0014447	1.6665	0.00067424	404.58983696837504	39.349	1.3734	39.36	38.786	40.16	0.010708					98	36	4	0	0	0	0.85259	1	2420	2420		20.03	4.6974	1	332570			58951	1902	39343	39359	66904	66904					0.14683716741933495
TPMRDEDY	8	Unmodified	_TPMRDEDY_					0	0	0		nc|ENSG00000146063|Q8WV44-4|TRIM41;ENST00000508930.1_1_5:180650987-180660460:+|nuORF;nc|ENSG00000146063|Q8WV44-2|TRIM41;ENSG00000146063|ENST00000315073|TRIM41	nc|ENSG00000146063|Q8WV44-4|TRIM41	nc|ENSG00000146063|Q8WV44-4|TRIM41	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.7105102539062	2	513.713482	1025.41241	-0.96229	-0.00049434	-2.6806	-0.0013771	-3.6429	-0.0018714	513.7120873161073	35.028	0.42018	35.035	34.83	35.25	0.0063934					20	10	2	0	0	0	0.9283	1	2174	2174		49.442	10.635	1	72580			58952	4816	39344	39360	66905	66905					-0.0992793635587077
TPMTDSNVKG	10	Unmodified	_TPMTDSNVKG_					0	0	0			REV__ENSG00000218336|ENST00000511685|TENM3	REV__ENSG00000218336|ENST00000511685|TENM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.2489013671875	2	525.250231	1048.48591	0.16335	8.5798E-05	-3.4288	-0.001801	-3.2655	-0.0017152	525.248320459045	26.453	0.85244	26.415	26.017	26.87	-0.038525					42	18	4	0	0	0	0.6116	1	1174	1174		49.442	13.823	1	297920	+		58953	23698	39345	39361	66906	66906					-0.0363938791340388
TPMVNPLIYT	10	Unmodified	_TPMVNPLIYT_					0	0	0		ENSG00000168158|ENST00000304936|OR2C1	ENSG00000168158|ENST00000304936|OR2C1	ENSG00000168158|ENST00000304936|OR2C1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.308837890625	2	574.804642	1147.59473	0.48446	0.00027847	2.9383	0.001689	3.4228	0.0019674	574.8061834619125	33.892	0.55391	33.938	33.653	34.207	0.045853					44	25	2	0	0	0	0.70553	1	1674	1674		44.377	0.26039	1	186370			58954	6379	39346	39362	66907	66907					0.02683823056872825
TPMVNPLIYT	10	Unmodified	_TPMVNPLIYT_					0	0	0		ENSG00000168158|ENST00000304936|OR2C1	ENSG00000168158|ENST00000304936|OR2C1	ENSG00000168158|ENST00000304936|OR2C1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.3070068359375	2	574.804642	1147.59473	0.27125	0.00015592	3.5881	0.0020625	3.8594	0.0022184	574.8063559117861	33.69	0.47034	33.798	33.59	34.06	0.10828					35	20	2	0	0	0	0.86218	1	1663	1663		32.812	0.85756	1	152360			58955	6379	39346	39362	66908	66908					0.02683823056872825
TPNKRALTG	9	Unmodified	_TPNKRALTG_					0	0	0			REV__ENST00000452284.1_1_22:21356738-21362956:+|nuORF	REV__ENST00000452284.1_1_22:21356738-21362956:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774963378906	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.71772	1	8241	8241		39.253	1.4413	1	6441000	+		58956	26595	39347	39363	66909	66909					0.060319920203255606
TPNRPIKN	8	Unmodified	_TPNRPIKN_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|15|1|sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|15|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.27020263671875	2	470.272158	938.529764	-1.3301	-0.00062551	1.347	0.00063347	0.016922	7.9581E-06	470.27272461569635	91.968	1.6857	92.431	92.02	93.705	0.46249					82	39	3	0	0	0	0.87479	1	10980	10980		30.504	3.8107	1	881790	+		58957	29569	39348	39364	66910	66910					0.05804009365908769
TPPAPTPARLL	11	Unmodified	_TPPAPTPARLL_					0	0	0		chr19:46634725-46639277|43|13.02|0.0|20.31|-|2|GNG8,None|1	chr19:46634725-46639277|43|13.02|0.0|20.31|-|2|GNG8,None|1	chr19:46634725-46639277|43|13.02|0.0|20.31|-|2|GNG8,None|1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3359375	2	567.337498	1132.66044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.152	1	98.348	97.848	98.848	0.19585								0	0	0	0.56276	1	10116	10116		30.318	2.2362	1				58958	284	39349	39365	66911	66911					0.099419802940929
TPPARLAK	8	Unmodified	_TPPARLAK_					0	0	0		nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000115266|O95996-3|APC2;ENSG00000115266|ENST00000590469|APC2	nc|ENSG00000115266|O95996-2|APC2	nc|ENSG00000115266|O95996-2|APC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.29486083984375	2	427.266345	852.518136	-0.15088	-6.4467E-05	-1.4646	-0.00062576	-1.6155	-0.00069023	427.2657316293671	74.711	0.52995	75.103	74.87	75.4	0.3911					17	12	2	0	0	0	0.4196	1	8415	8415		35.618	0	1	105950			58959	2826	39350	39366	66912	66912					0.08597812342566158
TPPARPGR	8	Unmodified	_TPPARPGR_					0	0	0		ENST00000450445.1_1_9:16726832-16727376:+|nuORF	ENST00000450445.1_1_9:16726832-16727376:+|nuORF	ENST00000450445.1_1_9:16726832-16727376:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.24591064453125	2	426.245944	850.477334	1.0559	0.00045007	-0.79439	-0.0003386	0.2615	0.00011146	426.2455229557475	87.647	3.9379	87.573	85.625	89.563	-0.074005					153	92	2	0	0	0	0.884	1	9113	9113		33.516	5.2613	1	4306400			58960	11889	39351	39367	66913	66913					0.046114710229517186
TPPARPGR	8	Unmodified	_TPPARPGR_					0	0	0		ENST00000450445.1_1_9:16726832-16727376:+|nuORF	ENST00000450445.1_1_9:16726832-16727376:+|nuORF	ENST00000450445.1_1_9:16726832-16727376:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.245849609375	2	426.245944	850.477334	2.6022	0.0011092	-2.3558	-0.0010042	0.24641	0.00010503	426.2448505635507	87.493	3.3011	87.546	86.187	89.488	0.053024					131	77	2	0	0	0	0.85277	1	8922	8922		25.45	4.9683	1	4266000			58961	11889	39351	39367	66914	66914					0.046114710229517186
TPPAVLEV	8	Unmodified	_TPPAVLEV_					0	0	0		nc|ENSG00000085552|Q9P2J2-2|IGSF9;ENSG00000085552|ENST00000368094|IGSF9;ENST00000476102.1_1_1:159900586-159913268:-|nuORF	nc|ENSG00000085552|Q9P2J2-2|IGSF9	nc|ENSG00000085552|Q9P2J2-2|IGSF9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.23748779296875	2	413.239461	824.46437	-1.33	-0.0005496	-1.1028	-0.00045573	-2.4328	-0.0010053	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.85277	1	7235	7235		25.45	2.4077	1	895630			58962	1533	39352	39368	66915	66915					0.04511595120197853
TPPEYELL	8	Unmodified	_TPPEYELL_					0	0	0			REV__nc|ENSG00000215695|Q92681|RSC1A1	REV__nc|ENSG00000215695|Q92681|RSC1A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.2452087402344	2	481.247483	960.480414	-0.24513	-0.00011797	-4.0204	-0.0019348	-4.2656	-0.0020528	481.24542771564984	28.473	0.88937	28.433	27.926	28.816	-0.039907					49	21	3	0	0	0	0.88944	1	1421	1421		57.811	8.2752	1	264800	+		58963	30204	39353	39369	66916	66916					-0.0014074343357606267
TPPLGKKQS	9	Unmodified	_TPPLGKKQS_					0	0	0		ENSG00000006062|ENST00000344686|MAP3K14	ENSG00000006062|ENST00000344686|MAP3K14	ENSG00000006062|ENST00000344686|MAP3K14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7286376953125	2	478.282192	954.549831	0.32439	0.00015515	4.0548	0.0019394	4.3792	0.0020945	478.28425988764974	97.694	0.45654	98.084	97.763	98.219	0.39065					17	10	2	0	0	0	0.20789	1	11792	11792		26.693	10.686	1	75453			58964	692	39354	39370	66917	66917					0.07073760305854648
TPPRRPASPSA	11	Unmodified	_TPPRRPASPSA_					0	0	0		ENSG00000171794|ENST00000304477|UTF1	ENSG00000171794|ENST00000304477|UTF1	ENSG00000171794|ENST00000304477|UTF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.2747802734375	2	568.812179	1135.60981	0.44183	0.00025132	-3.8022	-0.0021627	-3.3604	-0.0019114	568.8102007257518	58.225	0.62403	58.312	57.929	58.553	0.087002					35	25	2	0	0	0	0.17457	1	4972	4972		28.081	6.1216	1	131930			58965	6710	39355	39371	66918	66918					0.04742450969092715
TPPSELPDAP	10	Unmodified	_TPPSELPDAP_					0	0	0			REV__ENSG00000156858|ENST00000300835|PRR14	REV__ENSG00000156858|ENST00000300835|PRR14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2537841796875	2	512.253297	1022.49204	-0.38169	-0.00019552	1.3498	0.00069142	0.96807	0.0004959	512.2538769688313	54.312	1.3388	54.263	53.816	55.154	-0.049274					65	39	2	0	0	0	0.74274	1	4496	4496		42.396	6.7778	1	691410	+		58966	20509	39356	39372	66919	66919					-0.01830546410246825
TPPSKTVI	8	Unmodified	_TPPSKTVI_					0	0	0		ENSG00000185823|ENST00000329468|NPAP1	ENSG00000185823|ENST00000329468|NPAP1	ENSG00000185823|ENST00000329468|NPAP1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.75115966796875	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.279	1	77.332	76.832	77.832	0.052696								0	0	0	0.29245	1	7480	7480		30.504	0	1				58967	7745	39357	39373	66920	66920					0.06383284011531032
TPPSSVSSSL	10	Unmodified	_TPPSSVSSSL_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.2452392578125	2	481.245472	960.476391	-0.24513	-0.00011797	0.15905	7.6544E-05	-0.086073	-4.1422E-05	481.24542771564984	28.473	0.88937	28.433	27.926	28.816	-0.039907					49	21	3	0	0	0	0.28217	1	1432	1432		74.255	5.4682	1	264800			58968	3009	39358	39374	66921	66921					-0.005428329272717747
TPPTSFHPFLL	11	Unmodified	_TPPTSFHPFLL_					0	0	0			REV__ENST00000299980.8_2_16:71766487-71766874:-|nuORF	REV__ENST00000299980.8_2_16:71766487-71766874:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.56072998046875	3	419.560646	1255.66011	-0.39824	-0.00016709	0.45488	0.00019085	0.05664	2.3764E-05	419.5607134988475	33.033	0.70608	32.978	32.673	33.379	-0.05434					42	17	3	0	0	0	0.60687	1	1984	1984		43.651	2.5707	1	142470	+		58969	24744	39359	39375	66922	66922					0.04250560574246265
TPPTSSATL	9	Unmodified	_TPPTSSATL_					0	0	0			REV__ENSG00000132953|ENST00000255305|XPO4	REV__ENSG00000132953|ENST00000255305|XPO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.7290954589844	2	437.729458	873.444362	1.7083	0.00074777	-1.1639	-0.00050946	0.54441	0.0002383	437.72880961394964	26.367	0.80959	26.334	25.983	26.792	-0.032125					38	17	3	0	0	0	0.51307	1	1112	1112		51.335	7.2187	1	136100	+		58970	19047	39360	39376	66923	66923					0.0025779938957839477
TPQGHEKLLRT	11	Unmodified	_TPQGHEKLLRT_					0	0	0		ENSG00000090581|ENST00000204679|GNPTG;ENST00000527168.5_1_16:1412406-1413089:+|nuORF	ENSG00000090581|ENST00000204679|GNPTG	ENSG00000090581|ENST00000204679|GNPTG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3580932617188	2	640.359493	1278.70443	2.419	0.001549	-3.4406	-0.0022032	-1.0216	-0.00065422	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.67778	1	10799	10799		35.152	1.2304	1	625580			58971	1650	39361	39377	66924	66924					0.07622964720417258
TPQKDVIIKSD	11	Unmodified	_TPQKDVIIKSD_					0	0	0		ENSG00000137955|ENST00000319942|RABGGTB;ENST00000496055.5_1_1:76251947-76253334:+|nuORF;ENST00000485459.5_1_1:76251947-76255783:+|nuORF	ENSG00000137955|ENST00000319942|RABGGTB	ENSG00000137955|ENST00000319942|RABGGTB	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	622.3443603515625	2	622.34826	1242.68197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.323	1	94.323	93.823	94.823	0								0	0	0	0.56276	1	9338	9338		31.634	2.4642	1				58972	4248	39362	39378	66925	66925					0.07033320532127618
TPQKDVIIKSD	11	Unmodified	_TPQKDVIIKSD_					0	0	0		ENSG00000137955|ENST00000319942|RABGGTB;ENST00000496055.5_1_1:76251947-76253334:+|nuORF;ENST00000485459.5_1_1:76251947-76255783:+|nuORF	ENSG00000137955|ENST00000319942|RABGGTB	ENSG00000137955|ENST00000319942|RABGGTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3463745117188	2	622.34826	1242.68197	-0.2781	-0.00017307	-1.2665	-0.00078821	-1.5446	-0.00096128	622.3475674365299	96.114	2.8356	96.18	95.181	98.017	0.06591					140	66	3	0	0	0	0.67041	1	10080	10080		36.318	3.5671	1	306120			58973	4248	39362	39378	66926	66926					0.07033320532127618
TPQKRPRGRR	10	Unmodified	_TPQKRPRGRR_					0	0	0			REV__ENSG00000152217|ENST00000649279|SETBP1	REV__ENSG00000152217|ENST00000649279|SETBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.9224548339844	3	417.921683	1250.74322	-0.18602	-7.7743E-05	1.7395	0.00072699	1.5535	0.00064924	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.85251	2	11440	11440;11500		14.694	2.2608	1	19495000	+		58974	20291	39363	39379	66927;66928	66927					0.1278773486544651
TPQKRPRGRR	10	Unmodified	_TPQKRPRGRR_					0	0	0			REV__ENSG00000152217|ENST00000649279|SETBP1	REV__ENSG00000152217|ENST00000649279|SETBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.92242431640625	3	417.921683	1250.74322	-1.7716	-0.00074038	3.301	0.0013796	1.5294	0.00063919	417.92308931399344	105.49	2.9586	105.65	104.79	107.75	0.15925					261	73	4	0	0	0	0.85251	1	11263	11263		14.086	0	1	33626000	+		58975	20291	39363	39379	66929	66929					0.1278773486544651
TPQLQIVPSIV	11	Unmodified	_TPQLQIVPSIV_					0	0	0			REV__ENSG00000147383|ENST00000370274|NSDHL	REV__ENSG00000147383|ENST00000370274|NSDHL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8560180664062	2	597.858264	1193.70197	-0.43133	-0.00025788	-2.8188	-0.0016852	-3.2501	-0.0019431	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.67778	1	10013	10013		35.152	0	1	6857100	+		58976	20067	39364	39380	66930	66930					0.11287116262747077
TPQNEWYCPIE	11	Unmodified	_TPQNEWYCPIE_					0	0	0			REV__ENSG00000058673|ENST00000367210|ZC3H11A	REV__ENSG00000058673|ENST00000367210|ZC3H11A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.5363464355469	3	460.53606	1378.58635	-1.5757	-0.00072564	0.71553	0.00032953	-0.86013	-0.00039612	460.5365320506594	30.612	0.62018	30.641	30.362	30.982	0.028618					39	13	4	0	0	0	0.69071	1	2013	2013		33.039	4.9579	1	516150	+		58977	16439	39365	39381	66931	66931					-0.08779775650418742
TPQNEWYCPIE	11	Unmodified	_TPQNEWYCPIE_					0	0	0			REV__ENSG00000058673|ENST00000367210|ZC3H11A	REV__ENSG00000058673|ENST00000367210|ZC3H11A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	460.53606	1378.58635	-0.029902	-1.3771E-05	-0.67788	-0.00031219	-0.70778	-0.00032596	460.53576513272907	30.718	0.56711	30.722	30.404	30.971	0.0037212	0.040383	-0.00054837	NaN	33.039	34	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	711380	+		58978	16439	39365	39381							-0.08779775650418742
TPQPRPHE	8	Unmodified	_TPQPRPHE_					0	0	0		ENST00000595357.5_1_19:47225490-47234099:-|nuORF;ENSG00000090372|ENST00000263280|STRN4;nc|ENSG00000090372|Q9NRL3-3|STRN4	ENST00000595357.5_1_19:47225490-47234099:-|nuORF	ENST00000595357.5_1_19:47225490-47234099:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2450866699219	2	481.246141	960.477728	-0.99487	-0.00047878	-0.45407	-0.00021852	-1.4489	-0.00069729	481.24577626446245	28.501	1.0301	28.479	28.021	29.051	-0.02207					50	27	3	0	0	0	0.92394	1	1374	1374		47.657	0	1	305280			58979	1642	39366	39382	66932	66932					-0.004091540478725619
TPQSIDTLS	9	Unmodified	_TPQSIDTLS_					0	0	0			REV__ENSG00000160602|ENST00000268766|NEK8	REV__ENSG00000160602|ENST00000268766|NEK8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.2452392578125	2	481.245472	960.476391	-0.24513	-0.00011797	0.15905	7.6544E-05	-0.086073	-4.1422E-05	481.24542771564984	28.473	0.88937	28.433	27.926	28.816	-0.039907					49	21	3	0	0	0	0.38563	1	1443	1443		58.782	7.4465	1	264800	+		58980	20726	39367	39383	66933	66933					-0.0054283292729451205
TPQVLKLL	8	Unmodified	_TPQVLKLL_					0	0	0		nc|ENSG00000101265|P50749-2|RASSF2;ENST00000478553.1_1_20:4768339-4773698:-|nuORF;ENSG00000101265|ENST00000379400|RASSF2	nc|ENSG00000101265|P50749-2|RASSF2	nc|ENSG00000101265|P50749-2|RASSF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30145263671875	2	456.299853	910.585153	-1.2643	-0.00057689	4.2328	0.0019314	2.9685	0.0013545	456.30161744594176	35.005	1.68	35.044	34.605	36.285	0.038643					125	54	3	0	0	0	0.89494	1	1850	1850		37.159	6.6555	1	565550			58981	1923	39368	39384	66934	66934					0.1262842283365444
TPQVVRHRP	9	Unmodified	_TPQVVRHRP_					0	0	0			REV__ENSG00000002726|ENST00000360937|AOC1;REV__ENST00000480582.1_1_7:150555040-150557681:+|nuORF	REV__ENST00000480582.1_1_7:150555040-150557681:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3167114257812	2	545.317432	1088.62031	-1.4651	-0.00079892	0.057523	3.1368E-05	-1.4075	-0.00076755	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.73802	1	8711	8711		37.812	3.639	1	4998200	+		58982	27421;16046	39369	39385	66935	66935					0.07954478414194455
TPQYKGKS	8	Unmodified	_TPQYKGKS_					0	0	0		nc|ENSG00000068745|Q9UHH9-4|IP6K2;nc|ENSG00000068745|Q9UHH9-5|IP6K2	nc|ENSG00000068745|Q9UHH9-4|IP6K2	nc|ENSG00000068745|Q9UHH9-4|IP6K2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.7449035644531	2	454.745442	907.476331	1.0531	0.00047889	-2.1634	-0.00098381	-1.1103	-0.00050492	454.74431898752607	103.74	1.4301	103.79	103.32	104.75	0.041489					80	34	3	0	0	0	0.89962	1	11265	11265		38.806	5.9937	1	827910			58983	14771	39370	39386	66936	66936					0.018892118633857535
TPRAPRAH	8	Unmodified	_TPRAPRAH_					0	0	0			REV__ENST00000543714.5_1_11:73692668-73693858:-|nuORF	REV__ENST00000543714.5_1_11:73692668-73693858:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.76837158203125	2	453.256843	904.499132	-1.7456	-0.0007912	1.9605	0.00088861	0.21491	9.741E-05	453.2567942862552	30.209	0.44235	30.238	30.008	30.45	0.028618					18	9	3	0	0	0	0.4196	1	1941	1941		44.531	7.372	1	85136	+		58984	24889	39371	39387	66937	66937					0.043062757715119915
TPRKEWQYPL	10	Unmodified	_TPRKEWQYPL_					0	0	0			REV__ENST00000572010.5_1_16:67986261-67997363:-|nuORF	REV__ENST00000572010.5_1_16:67986261-67997363:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.8861999511719	3	439.903183	1316.68772	-0.31261	-0.00013752	-2.1345	-0.00093896	-2.4471	-0.0010765	440.23549613066933	32.552	0.18163	32.498	32.401	32.582	-0.054337					5	3	2	0	0	0	0.37624	1	1912	1912		19.263	0	1	12741	+		58985	28936	39372	39388	66938	66938					0.04204463834480521
TPRMGTPR	8	Unmodified	_TPRMGTPR_					0	0	0			REV__ENST00000380262.7_1_17:7847547-7849136:+|nuORF	REV__ENST00000380262.7_1_17:7847547-7849136:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.26324462890625	2	458.245086	914.47562	-0.096086	-4.4031E-05	-0.20821	-9.5413E-05	-0.3043	-0.00013944	458.24477253147995	80.707	1.0784	81.234	80.569	81.647	0.52676					36	25	2	0	0	0	0.4196	1	9257	9257		20.947	0	1	124460	+		58986	25945	39373	39389	66939	66939					0.014960939426714503
TPRPVPRVTTK	11	Unmodified	_TPRPVPRVTTK_					0	0	0		ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.8897094726562	2	626.380229	1250.7459	1.3709	0.00085872	-0.95555	-0.00059854	0.41537	0.00026018	626.3800393244394	108.45	0.38971	108.58	108.3	108.69	0.13026					10	8	2	0	0	0	0.65746	1	11641	11641		37.812	9.73	1	463970			58987	6856	39374	39390	66940	66940					0.1305614547973164
TPRPVPRVTTK	11	Unmodified	_TPRPVPRVTTK_					0	0	0		ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	626.3890380859375	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.29	1	110.35	109.85	110.85	0.068001								0	0	0	0.56276	1	13390	13390		25.574	2.9944	1				58988	6856	39374	39390	66941	66941					0.1305614547973164
TPRPVPRVTTK	11	Unmodified	_TPRPVPRVTTK_					0	0	0		ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	626.380229	1250.7459	0.92893	0.00058186	-5.5293	-0.0034635	-4.6004	-0.0028816	626.375362616266	108.4	0.098404	108.44	108.37	108.46	0.034363	-0.068406	-0.00033846	NaN	37.812	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	415660			58989	6856	39374	39390							0.1305614547973164
TPRSGWAVDPF	11	Unmodified	_TPRSGWAVDPF_					0	0	0		nc|ENSG00000196547|P49641-1|MAN2A2;ENST00000558640.5_1_15:91449600-91450513:+|nuORF;ENST00000560192.5_1_15:91447248-91454469:+|nuORF;nc|ENSG00000196547|P49641-2|MAN2A2;ENSG00000196547|ENST00000559717|MAN2A2	nc|ENSG00000196547|P49641-1|MAN2A2	nc|ENSG00000196547|P49641-1|MAN2A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.2084655761719	3	411.540134	1231.59857	-0.039849	-1.6399E-05	-0.72555	-0.00029859	-0.7654	-0.00031499	411.5398371296285	59.966	0.56538	60.357	59.973	60.538	0.39077					20	14	2	0	0	0	0.17368	1	6321	6321		35.178	25.473	1	175690			58990	15185	39375	39391	66942	66942					-0.00796371125056794
TPRVRLHLQ	9	Unmodified	_TPRVRLHLQ_					0	0	0			REV__nc|ENSG00000153303|Q8N878-2|FRMD1	REV__nc|ENSG00000153303|Q8N878-2|FRMD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3412475585938	2	560.340907	1118.66726	3.1454	0.0017625	-4.1604	-0.0023312	-1.015	-0.00056875	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.77696	1	13120	13120		31.53	10.583	1	151040	+		58991	20345	39376	39392	66943	66943					0.11267337965318802
TPSIIQRKHK	10	Unmodified	_TPSIIQRKHK_					0	0	0			REV__ENST00000433306.1_1_X:25212500-25212860:-|nuORF	REV__ENST00000433306.1_1_X:25212500-25212860:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3673095703125	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.38	1	119.35	118.85	119.85	-0.024033								0	0	0	0.45132	1	13228	13228		16.473	3.514	1		+		58992	26648	39377	39393	66944	66944					0.12459876308253115
TPSKKLKRGKP	11	Unmodified	_TPSKKLKRGKP_					0	0	0			REV__ENST00000378204.6_1_8:119123393-119123786:-|nuORF	REV__ENST00000378204.6_1_8:119123393-119123786:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.93267822265625	3	413.934706	1238.78229	-1.8077	-0.00074828	-2.9541	-0.0012228	-4.7618	-0.0019711	413.9334753019912	44.718	2.8382	44.718	44.154	46.992	0					147	70	3	0	0	0	0.75779	1	3391	3391		20.315	0.28454	1	588320	+		58993	25891	39378	39394	66945	66945					0.1724502237645993
TPSQPLPTY	9	Unmodified	_TPSQPLPTY_					0	0	0		ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.25811767578125	2	502.258382	1002.50221	0.067878	3.4092E-05	-0.10901	-5.4753E-05	-0.041136	-2.0661E-05	502.25823575679027	54.48	0.62914	54.887	54.573	55.202	0.40663					43	14	4	0	0	0	0.11055	1	5557	5557		90.37	30.076	1	979030			58994	6887	39379	39395	66946	66946					0.0010606131497752358
TPSQPLPTY	9	Unmodified	_TPSQPLPTY_					0	0	0		ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213	ENSG00000173821|ENST00000582970|RNF213	ENSG00000173821|ENST00000582970|RNF213	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.2587585449219	2	502.258382	1002.50221	-0.073088	-3.6709E-05	-0.032114	-1.613E-05	-0.1052	-5.2839E-05	502.25824418455375	54.258	0.6262	54.843	54.585	55.211	0.58474					42	14	4	0	0	0	0.35373	1	5544	5544		60.972	13.056	1	1126200			58995	6887	39379	39395	66947	66947					0.0010606131497752358
TPSTAFSSH	9	Unmodified	_TPSTAFSSH_					0	0	0			REV__ENSG00000101745|ENST00000262126|ANKRD12	REV__ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.71441650390625	2	467.716882	933.41921	-0.39655	-0.00018547	-2.7002	-0.0012629	-3.0967	-0.0014484	467.7154788836338	69.87	0.71318	70.254	70.036	70.75	0.38416					27	18	2	0	0	0	0.77546	1	7767	7767		31.955	0.42505	1	256400	+		58996	17298	39380	39396	66948	66948					-0.05016255412999726
TPSVPQTP	8	Unmodified	_TPSVPQTP_					0	0	0			REV__ENST00000375943.6_1_1:15769060-15773263:+|nuORF	REV__ENST00000375943.6_1_1:15769060-15773263:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2381286621094	2	413.718893	825.423233	-0.049155	-2.0336E-05	-3.2066	-0.0013266	-3.2558	-0.001347	413.717652378832	77.946	2.0904	77.895	77.459	79.55	-0.050789					86	66	2	0	0	0	0.4196	1	7752	7752		23.042	2.0956	1	76089	+		58997	25828	39381	39397	66949	66949					0.0035383408070401856
TPTGIKVVM	9	Unmodified	_TPTGIKVVM_					0	0	0		ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.2764587402344	2	473.275521	944.536489	-0.49514	-0.00023434	-0.23025	-0.00010897	-0.72539	-0.00034331	473.27529019755644	48.891	0.68486	49.795	49.489	50.174	0.90424					37	16	3	0	0	0	0.038282	2	4761	4749;4761		113.41	44.927	1	1207400			58998	6555	39382	39398	66950;66951	66951					0.06200186202261193
TPTLDDEPEQA	11	Unmodified	_TPTLDDEPEQA_					0	0	0			REV__nc|ENSG00000132694|O15085|ARHGEF11	REV__nc|ENSG00000132694|O15085|ARHGEF11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.2727661132812	2	608.272415	1214.53028	-0.44302	-0.00026948	0.55589	0.00033813	0.11287	6.8653E-05	608.2726380221598	67.152	0.5586	67.168	66.965	67.524	0.016197					52	24	3	0	0	0	0.62614	1	6310	6310		41.427	1.3684	1	127700	+		58999	19023	39383	39399	66952	66952					-0.06840705286231241
TPTLLAQSG	9	Unmodified	_TPTLLAQSG_					0	0	0			REV__ENST00000533086.5_1_19:15228578-15234387:-|nuORF	REV__ENST00000533086.5_1_19:15228578-15234387:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	444.2457275390625	2	444.245275	886.475997	-0.96188	-0.00042731	0.67476	0.00029976	-0.28712	-0.00012755	444.24588866183285	107.3	0.80266	107.3	106.89	107.69	0					50	18	4	0	0	0	0.78124	1	11146	11146		30.318	1.1477	1	1449300	+		59000	17508	39384	39400	66953	66953					0.02821792143527091
TPTLPIRK	8	Unmodified	_TPTLPIRK_					0	0	0			REV__ENST00000558939.5_1_15:70341027-70341300:-|nuORF	REV__ENST00000558939.5_1_15:70341027-70341300:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7743835449219	2	463.295102	924.575651	0.044326	2.0536E-05	-3.6213	-0.0016777	-3.577	-0.0016572	463.29533966522797	24.65	0.26832	24.321	24.116	24.384	-0.32825					10	5	3	0	0	0	0.4196	1	1193	1193		19.36	5.5846	1	20245	+		59001	28741	39385	39401	66954	66954					0.11034654548143408
TPTPVPVVG	9	Unmodified	_TPTPVPVVG_					0	0	0		nc|ENSG00000063244|P26368-2|U2AF2;ENSG00000063244|ENST00000308924|U2AF2	nc|ENSG00000063244|P26368-2|U2AF2	nc|ENSG00000063244|P26368-2|U2AF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7527770996094	2	433.752736	865.490919	-0.89842	-0.00038969	1.1465	0.00049731	0.2481	0.00010762	433.7530751140989	61.556	3.4273	61.944	61.394	64.821	0.38845					196	83	3	0	0	0	0.69914	1	6810	6810		40.573	1.3198	1	960390			59002	1090	39386	39402	66955	66955					0.052792840115330364
TPTRLHKRLS	10	Unmodified	_TPTRLHKRLS_					0	0	0			REV__ENSG00000188629|ENST00000683217|ZNF177	REV__ENSG00000188629|ENST00000683217|ZNF177	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.86962890625	2	604.864746	1207.71494	3.1995	0.0019352	3.2307	0.0019541	6.4302	0.0038894	604.8668402656671	112.87	1.1902	112.84	112.7	113.89	-0.024811					43	32	2	0	0	0	0.87326	1	12574	12574		13.454	1.2472	1	550830	+		59003	23018	39387	39403	66956	66956					0.11938992165505624
TPVAQEPP	8	Unmodified	_TPVAQEPP_					0	0	0		ENSG00000214814|ENST00000522917|FER1L6	ENSG00000214814|ENST00000522917|FER1L6	ENSG00000214814|ENST00000522917|FER1L6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.718505859375	2	419.718893	837.423233	-1.8624	-0.0007817	1.6945	0.0007112	-0.16797	-7.0499E-05	419.71948576487165	43.657	1.1512	43.665	43.227	44.378	0.0082664					62	27	3	0	0	0	0.87479	1	3050	3050		30.504	3.7075	1	963550			59004	8638	39388	39404	66957	66957					-0.0019816591927792615
TPVASSEASI	10	Unmodified	_TPVASSEASI_					0	0	0		nc|ENSG00000169876|Q685J3-2|MUC17;ENSG00000169876|ENST00000306151|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	nc|ENSG00000169876|Q685J3-2|MUC17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.2459716796875	2	481.245472	960.476391	0.89844	0.00043237	-0.58984	-0.00028386	0.3086	0.00014851	481.24510499284594	21.017	0.39685	21.086	20.896	21.292	0.068251					24	16	2	0	0	0	0.64457	1	529	529		47.657	3.2801	1	34294			59005	6534	39389	39405	66958	66958					-0.005428329272717747
TPVEEPISIE	10	Unmodified	_TPVEEPISIE_					0	0	0			REV__nc|ENSG00000153707|P23468-2|PTPRD	REV__nc|ENSG00000153707|P23468-2|PTPRD	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.2862548828125	2	557.287337	1112.56012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.822	1	22.763	22.263	23.263	-0.05867								0	0	0	0.45132	1	761	761		60.972	13.056	1		+		59006	20354	39390	39406	66959	66959					0.00834278449769954
TPVHFAVGN	9	Unmodified	_TPVHFAVGN_					0	0	0			REV__ENST00000424043.3_1_1:92580458-92580773:-|nuORF	REV__ENST00000424043.3_1_1:92580458-92580773:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	471.2416687011719	2	471.245609	940.476666	-1.6339	-0.00076995	-2.1185	-0.00099833	-3.7523	-0.0017683	471.24439943443156	85.663	2.966	85.821	84.632	87.598	0.15851					150	68	3	0	0	0	0.78536	1	8437	8437		29.15	0	1	239090	+		59007	26513	39391	39407	66960	66960					0.0040463158322836534
TPVLFFPPPTG	11	Unmodified	_TPVLFFPPPTG_					0	0	0			REV__ENST00000360270.6_1_X:64959754-64959913:+|nuORF	REV__ENST00000360270.6_1_X:64959754-64959913:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	586.8231811523438	2	586.82115	1171.62775	3.286	0.0019283	1.0471	0.00061444	4.333	0.0025427	586.8216293671125	110.39	1.5907	110.37	110.09	111.68	-0.027641					140	51	5	0	0	0	0.69995	1	12224	12224		31.53	0	1	6942100	+		59008	25474	39392	39408	66961	66961					0.048797731712284076
TPVLLPYKP	9	Unmodified	_TPVLLPYKP_					0	0	0		nc|ENSG00000155229|Q96T76-8|MMS19;nc|ENSG00000155229|Q96T76-9|MMS19;ENSG00000155229|ENST00000438925|MMS19;nc|ENSG00000155229|Q96T76-5|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	nc|ENSG00000155229|Q96T76-8|MMS19	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.809326171875	2	514.312961	1026.61137	-0.40773	-0.0002097	-3.9976	-0.002056	-4.4053	-0.0022657	514.3107991559394	50.993	0.67104	50.969	50.815	51.486	-0.02343					26	19	2	0	0	0	0.20789	1	4472	4472		42.396	10.866	1	89326			59009	15006	39393	39409	66962	66962					0.0991269200512761
TPVLRRHRYSI	11	Unmodified	_TPVLRRHRYSI_					0	0	0		ENSG00000152580|ENST00000282466|IGSF10	ENSG00000152580|ENST00000282466|IGSF10	ENSG00000152580|ENST00000282466|IGSF10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.6084289550781	3	466.608993	1396.80515	-0.93039	-0.00043413	-1.339	-0.00062477	-2.2694	-0.0010589	466.6082212965859	101	2.1787	101	99.472	101.65	0					144	51	4	0	0	0	0.7896	1	10112	10112		13.508	0	1	331070			59010	5185	39394	39410	66963	66963					0.12262041493931974
TPVLTSSIL	9	Unmodified	_TPVLTSSIL_					0	0	0		ENSG00000167720|ENST00000344595|SRR	ENSG00000167720|ENST00000344595|SRR	ENSG00000167720|ENST00000344595|SRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77777099609375	2	465.778951	929.543348	-1.4399	-0.00067067	-1.5585	-0.00072594	-2.9984	-0.0013966	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.58151	1	7507	7507		47.916	0	1	287800			59011	6322	39395	39411	66964	66964					0.07575822354476713
TPVLVYDLEDI	11	Unmodified	_TPVLVYDLEDI_					0	0	0			REV__nc|ENSG00000114316|Q13107-2|USP4	REV__nc|ENSG00000114316|Q13107-2|USP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	638.8347778320312	2	638.837194	1275.65983	-0.69862	-0.00044631	-1.7483	-0.0011169	-2.447	-0.0015632	638.835717832915	74.828	1.0238	74.914	74.628	75.651	0.085907					67	27	4	0	0	0	0.15108	1	6907	6907		82.241	12.613	1	647960	+		59012	18038	39396	39412	66965	66965					0.033030960637233875
TPVNALVSH	9	Unmodified	_TPVNALVSH_					0	0	0		ENST00000418437.1_1_13:21834372-21835116:+|nuORF	ENST00000418437.1_1_13:21834372-21835116:+|nuORF	ENST00000418437.1_1_13:21834372-21835116:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	469.25726318359375	2	469.258717	936.50288	0.57593	0.00027026	-0.18433	-8.6499E-05	0.3916	0.00018376	469.2584719664024	25.428	0.58886	25.479	25.19	25.779	0.050453					50	24	3	0	0	0	0.76255	1	997	997		35.618	0	1	123140			59013	11422	39397	39413	66966	66966					0.032089007547028814
TPVPVRNP	8	Unmodified	_TPVPVRNP_					0	0	0		ENSG00000186838|ENST00000335426|SELENOV	ENSG00000186838|ENST00000335426|SELENOV	ENSG00000186838|ENST00000335426|SELENOV	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2552185058594	2	440.255977	878.497401	-0.8618	-0.00037941	-0.60853	-0.00026791	-1.4703	-0.00064732	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.884	1	6890	6890		33.516	9.0116	1	1365500			59014	7824	39398	39414	66967	66967					0.05329221962892916
TPVTEQSIA	9	Unmodified	_TPVTEQSIA_					0	0	0		nc|ENSG00000168658|Q502W6-6|VWA3B;ENST00000463635.1_1_2:98736095-98738506:+|nuORF;ENST00000432242.5_1_2:98736050-98809363:+|nuORF;ENST00000422503.6_1_2:98732117-98833284:+|nuORF;nc|ENSG00000168658|Q502W6-2|VWA3B;nc|ENSG00000168658|Q502W6-8|VWA3B;ENST00000409460.5_1_2:98703705-98907168:+|nuORF;ENSG00000168658|ENST00000477737|VWA3B	nc|ENSG00000168658|Q502W6-6|VWA3B	nc|ENSG00000168658|Q502W6-6|VWA3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.24798583984375	2	473.248015	944.481476	0.34188	0.00016179	-0.18615	-8.8093E-05	0.15574	7.3701E-05	473.24782054202086	28.883	1.4946	28.914	28.31	29.804	0.030945					99	51	4	0	0	0	0.28163	1	1391	1391		66.429	2.222	1	514570			59015	15080	39399	39415	66968	66968					0.007014709353370563
TPVTVKIPKAR	11	Unmodified	_TPVTVKIPKAR_					0	0	0		nc|ENSG00000138182|Q96Q89-4|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-5|KIF20B	nc|ENSG00000138182|Q96Q89-4|KIF20B	nc|ENSG00000138182|Q96Q89-4|KIF20B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.8865966796875	2	605.387522	1208.76049	0.26185	0.00015852	3.5289	0.0021364	3.7908	0.0022949	605.389725051937	44.911	0.88356	44.843	44.352	45.235	-0.06863					42	20	3	0	0	0	0.17294	1	3175	3175		9.6461	0	1	391520			59016	4280	39400	39416	66969	66969					0.16446217627867554
TPVVILLQ	8	Unmodified	_TPVVILLQ_					0	0	0		ENST00000520018.2_1_8:10691012-10697347:-|nuORF	ENST00000520018.2_1_8:10691012-10697347:-|nuORF	ENST00000520018.2_1_8:10691012-10697347:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.78765869140625	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.85277	1	3230	3230		25.45	6.0902	1	403970			59017	13152	39401	39417	66970	66970					0.11308733942325944
TPVVRQRTL	9	Unmodified	_TPVVRQRTL_					0	0	0		nc|ENSG00000105426|Q13332-6|PTPRS;nc|ENSG00000105426|Q13332-3|PTPRS;nc|ENSG00000105426|Q13332-4|PTPRS;nc|ENSG00000105426|Q13332-2|PTPRS;ENSG00000105426|ENST00000262963|PTPRS;nc|ENSG00000105426|Q13332-7|PTPRS;nc|ENSG00000105426|Q13332-5|PTPRS;ENST00000588552.5_1_19:5159112-5286160:-|nuORF	nc|ENSG00000105426|Q13332-6|PTPRS	nc|ENSG00000105426|Q13332-6|PTPRS	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.3261108398438	2	535.327465	1068.64038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.68	1	110.79	110.29	111.29	0.11659								0	0	0	0.32469	1	11915	11915		21.96	0	1				59018	2215	39402	39418	66971	66971					0.10880229354143012
TPVVVEVL	8	Unmodified	_TPVVVEVL_					0	0	0			REV__nc|ENSG00000144115|Q86YJ6-5|THNSL2	REV__nc|ENSG00000144115|Q86YJ6-5|THNSL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.2615966796875	2	428.262936	854.51132	1.4286	0.0006118	-4.4022	-0.0018853	-2.9736	-0.0012735	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.86288	1	9592	9592		26.796	1.3459	1	57042000	+		59019	19873	39403	39419	66972	66972					0.0782445467133357
TPWKLFLR	8	Unmodified	_TPWKLFLR_					0	0	0		ENSG00000266714|ENST00000645453|MYO15B	ENSG00000266714|ENST00000645453|MYO15B	ENSG00000266714|ENST00000645453|MYO15B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8173217773438	2	530.818744	1059.62294	1.4517	0.00077058	2.2551	0.001197	3.7068	0.0019676	530.8202359475955	85.686	1.0358	85.612	85.191	86.227	-0.073761					34	23	2	0	0	0	0.4196	1	8828	8828		16.473	3.514	1	125080			59020	8953	39404	39420	66973	66973					0.09550933819105012
TPYEGQRSY	9	Unmodified	_TPYEGQRSY_					0	0	0		nc|ENSG00000005007|Q92900|UPF1;ENSG00000005007|ENST00000262803|UPF1	nc|ENSG00000005007|Q92900|UPF1	nc|ENSG00000005007|Q92900|UPF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.753662109375	2	550.753995	1099.49344	-0.73178	-0.00040303	0.49366	0.00027188	-0.23813	-0.00013115	550.754177508086	32.402	0.60229	32.529	32.289	32.891	0.12643					29	13	3	0	0	0	0.29259	1	2271	2271		65.465	2.487	1	442690			59021	671	39405	39421	66974	66974					-0.05232912321457661
TPYRLDGARF	10	Unmodified	_TPYRLDGARF_					0	0	0			REV__nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18	REV__nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.315185546875	2	598.314554	1194.61456	-0.65943	-0.00039454	3.5835	0.0021441	2.9241	0.0017495	598.3165658452776	70.035	0.58058	70.106	69.911	70.492	0.071037					45	27	2	0	0	0	0.78666	1	6344	6344		40.058	0.80534	1	710120	+		59022	29754	39406	39422	66975	66975					0.025033351118281644
TQAASKQVSAL	11	Unmodified	_TQAASKQVSAL_					0	0	0			REV__nc|ENSG00000112029|Q9UKT4-2|FBXO5	REV__nc|ENSG00000112029|Q9UKT4-2|FBXO5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.3063354492188	2	552.306395	1102.59824	-0.70613	-0.00039	0.73262	0.00040463	0.026487	1.4629E-05	552.3067078159754	92.68	3.3587	92.75	91.234	94.593	0.06987					289	79	5	0	0	0	0.638	1	9617	9617		40.058	2.2467	1	1609500	+		59023	17909	39407	39423	66976	66976					0.05104209155092576
TQAIKRLA	8	Unmodified	_TQAIKRLA_					0	0	0		nc|ENSG00000240891|Q0VAA5-2|PLCXD2;ENSG00000240891|ENST00000636933|PLCXD2;nc|ENSG00000240891|Q0VAA5|PLCXD2	nc|ENSG00000240891|Q0VAA5-2|PLCXD2	nc|ENSG00000240891|Q0VAA5-2|PLCXD2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.7886047363281	2	450.784902	899.55525	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.05	1	110.12	109.62	110.62	0.068001								0	0	0	0.29703	1	13360	13360		37.159	2.9866	1				59024	8787	39408	39424	66977	66977					0.10145483888322815
TQALEDSGECR	11	Unmodified	_TQALEDSGECR_					0	0	0		ENSG00000166268|ENST00000552032|MYRFL	ENSG00000166268|ENST00000552032|MYRFL	ENSG00000166268|ENST00000552032|MYRFL	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.798583984375	2	604.764234	1207.51392	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.671	1	15.671	15.171	16.171	0								0	0	0	0.56276	1	55	55		33.922	6.0394	1				59025	6174	39409	39425	66978	66978					-0.08154109723955116
TQALPLLL	8	Unmodified	_TQALPLLL_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000529821.5_1_11:6587803-6593213:+|nuORF;ENST00000530197.5_1_11:6587352-6593213:+|nuORF;ENST00000533635.5_1_11:6587803-6591461:+|nuORF;ENST00000525883.5_1_11:6587352-6591461:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000533635.5_1_11:6587803-6591461:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25335693359375	2	434.778754	867.542954	-0.16727	-7.2724E-05	3.052	0.0013269	2.8847	0.0012542	434.78009930386463	76.478	0.76627	76.527	75.859	76.625	0.049187					31	22	2	0	0	0	0.4196	1	7392	7392		31.955	0	1	72492			59026	7276;13244	39410	39426	66979	66979					0.10388447425293634
TQALRTGH	8	Unmodified	_TQALRTGH_					0	0	0		ENST00000218004.5_1_X:108779178-108780191:+|nuORF	ENST00000218004.5_1_X:108779178-108780191:+|nuORF	ENST00000218004.5_1_X:108779178-108780191:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2403259277344	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.92457	1	7409	7409		47.916	5.5195	1	1219900			59027	9153	39411	39427	66980	66980					0.021228632977113193
TQAPALGRTG	10	Unmodified	_TQAPALGRTG_					0	0	0			REV__ENST00000228872.8_1_12:12870397-12870556:+|nuORF	REV__ENST00000228872.8_1_12:12870397-12870556:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.2673034667969	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.49268	1	8657	8657		56.434	12.317	1	1702800	+		59028	24187	39412	39428	66981	66981					0.033154016406683695
TQAPQTTQ	8	Unmodified	_TQAPQTTQ_					0	0	0		nc|ENSG00000145113|Q99102-9|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-10|MUC4;ENSG00000145113|ENST00000463781|MUC4	nc|ENSG00000145113|Q99102-9|MUC4	nc|ENSG00000145113|Q99102-9|MUC4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7735900878906	2	437.716882	873.41921	-0.3469	-0.00015184	0.71848	0.00031449	0.37158	0.00016265	437.71722295126153	27.503	0.45945	27.464	27.213	27.673	-0.038525					21	10	3	0	0	0	0.4196	1	1310	1310		27.882	6.9353	1	35696			59029	4748	39413	39429	66982	66982					-0.02256255412999053
TQARRRRRKFP	11	Unmodified	_TQARRRRRKFP_					0	0	0		ENST00000475854.1_1_X:100914419-100914797:-|nuORF;ENST00000328766.9_1_X:100913503-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	ENST00000475854.1_1_X:100914419-100914797:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.6341552734375	3	491.299153	1470.87563	2.8435	0.001397	-2.9468	-0.0014477	-0.1032	-5.0703E-05	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.80361	1	13145	13145		10.587	3.9272	1	3274400			59030	12331	39414	39430	66983	66983					0.15902759602249716
TQARSSLDLL	10	Unmodified	_TQARSSLDLL_					0	0	0		ENST00000378867.7_1_11:36397583-36422672:+|nuORF;ENST00000389693.3_1_11:36397601-36484283:+|nuORF	ENST00000378867.7_1_11:36397583-36422672:+|nuORF	ENST00000378867.7_1_11:36397583-36422672:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.3064575195312	2	552.306395	1102.59824	0.7768	0.00042903	-0.63241	-0.00034928	0.14439	7.9746E-05	552.3060097260034	92.551	2.2776	92.998	91.922	94.2	0.44661					137	53	3	0	0	0	0.8545	1	10982	10982		36.447	0.82846	1	579750			59031	10878	39415	39431	66984	66984					0.051042091551153135
TQASPIVP	8	Unmodified	_TQASPIVP_					0	0	0			REV__nc|ENSG00000132970|Q9UPY6-2|WASF3	REV__nc|ENSG00000132970|Q9UPY6-2|WASF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.72900390625	2	406.729261	811.443968	-0.27132	-0.00011035	-1.5271	-0.00062112	-1.7984	-0.00073147	406.7281682308466	76.314	2.0367	76.266	74.71	76.747	-0.048264					103	59	4	0	0	0	0.89962	1	7575	7575		38.806	13.356	1	159770	+		59032	29850	39416	39432	66985	66985					0.030704244603725783
TQATLLTTWL	10	Unmodified	_TQATLLTTWL_					0	0	0		ENSG00000104142|ENST00000220509|VPS18	ENSG00000104142|ENST00000220509|VPS18	ENSG00000104142|ENST00000220509|VPS18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.3170166015625	2	574.321514	1146.62847	0.034664	1.9908E-05	-3.5194	-0.0020213	-3.4847	-0.0020013	574.3193857134044	94.348	3.3565	94.783	93.636	96.992	0.43539					170	83	3	0	0	0	0.86348	1	11341	11341		31.53	4.4825	1	972590			59033	2117	39417	39433	66986	66986					0.06102567820266813
TQDGQLTASQE	11	Unmodified	_TQDGQLTASQE_					0	0	0			REV__nc|ENSG00000185379|O75771-3|RAD51D	REV__nc|ENSG00000185379|O75771-3|RAD51D	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.2709350585938	2	589.270207	1176.52586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.643	1	58.754	58.254	59.254	0.11027								0	0	0	0.56276	1	5008	5008		31.634	2.4642	1		+		59034	22763	39418	39434	66987	66987					-0.055341697091535025
TQDGRKIY	8	Unmodified	_TQDGRKIY_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	490.75872802734375	2	490.761623	979.508694	-1.2394	-0.00060824	0.99462	0.00048812	-0.24477	-0.00012012	490.76200800927813	19.579	0.44814	19.509	19.285	19.733	-0.070013					29	16	2	0	0	0	0.89962	1	426	426		38.806	5.2906	1	64072			59035	1945	39419	39435	66988	66988					0.01811999266374187
TQDKKYLY	8	Unmodified	_TQDKKYLY_					0	0	0		ENST00000476479.1_1_7:55479080-55499010:+|nuORF;ENST00000452107.6_1_7:55447520-55499010:+|nuORF;ENSG00000132434|ENST00000254770|LANCL2	ENST00000476479.1_1_7:55479080-55499010:+|nuORF	ENST00000476479.1_1_7:55479080-55499010:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.780029296875	2	529.779482	1057.54441	-0.33938	-0.0001798	0.36118	0.00019135	0.0218	1.1549E-05	529.7795579963132	64.39	0.96629	64.417	63.833	64.799	0.027145					56	25	3	0	0	0	0.89494	1	6044	6044		37.159	0	1	324740			59036	3794	39420	39436	66989	66989					0.017940367233904908
TQDLTPTRPL	10	Unmodified	_TQDLTPTRPL_					0	0	0		ENSG00000006611|ENST00000005226|USH1C	ENSG00000006611|ENST00000005226|USH1C	ENSG00000006611|ENST00000005226|USH1C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.778564453125	2	571.31422	1140.61389	-0.96168	-0.00054942	-0.45813	-0.00026174	-1.4198	-0.00081116	571.3135382048144	57.159	0.57277	57.553	57.284	57.856	0.39407					17	13	2	0	0	0	0.37624	1	5921	5921		38.754	0	1	317760			59037	705	39421	39437	66990	66990					0.0492049567212689
TQDLVQEKY	9	Unmodified	_TQDLVQEKY_					0	0	0		ENSG00000120289|ENST00000378982|MAGEB4;ENSG00000214107|ENST00000397548|MAGEB1;ENSG00000198681|ENST00000356661|MAGEA1	ENSG00000120289|ENST00000378982|MAGEB4;ENSG00000198681|ENST00000356661|MAGEA1	ENSG00000198681|ENST00000356661|MAGEA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.28564453125	2	562.285128	1122.5557	-1.1018	-0.00061951	0.53257	0.00029946	-0.5692	-0.00032005	562.2852883430395	50.312	0.54212	50.31	50.068	50.61	-0.0020447					22	12	2	0	0	0	0.29259	1	4261	4261		65.465	0	1	152890			59038	3124;8305	39422	39438	66991	66991					-0.0006718597312556085
TQDSSKPLVWG	11	Unmodified	_TQDSSKPLVWG_					0	0	0		chr20:45815540-45815854|63|52.86|0.56|6.56|+|ENST00000617055|UBE2C,UBE2C;nc|ENSG00000175063|O00762-4|UBE2C;chr20:45814470-45815390|63|40.78|0.65|5.97|+|ENST00000335046|UBE2C,UBE2C	chr20:45815540-45815854|63|52.86|0.56|6.56|+|ENST00000617055|UBE2C,UBE2C	chr20:45815540-45815854|63|52.86|0.56|6.56|+|ENST00000617055|UBE2C,UBE2C	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852783203125	3	406.543544	1216.6088	2.7444	0.0011157	-1.0933	-0.00044445	1.6511	0.00067125	406.5429620379294	29.284	0.46471	29.265	29.007	29.472	-0.019407					32	17	2	0	0	0	0.17553	1	1480	1480		29.551	0	1	26316			59039	361	39423	39439	66992	66992					0.009161918095287547
TQDSSKPLVWG	11	Unmodified	_TQDSSKPLVWG_					0	0	0		chr20:45815540-45815854|63|52.86|0.56|6.56|+|ENST00000617055|UBE2C,UBE2C;nc|ENSG00000175063|O00762-4|UBE2C;chr20:45814470-45815390|63|40.78|0.65|5.97|+|ENST00000335046|UBE2C,UBE2C	chr20:45815540-45815854|63|52.86|0.56|6.56|+|ENST00000617055|UBE2C,UBE2C	chr20:45815540-45815854|63|52.86|0.56|6.56|+|ENST00000617055|UBE2C,UBE2C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	406.543544	1216.6088	0.2443	9.9319E-05	1.0829	0.00044025	1.3272	0.00053957	406.5439690029421	29.166	0.32791	29.197	29.032	29.36	0.030945	-0.024959	0.0007468	NaN	29.551	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24535			59040	361	39423	39439							0.009161918095287547
TQEAPKIVVTN	11	Unmodified	_TQEAPKIVVTN_					0	0	0			REV__nc|ENSG00000128918|O94788-4|ALDH1A2	REV__nc|ENSG00000128918|O94788-4|ALDH1A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	600.3351440429688	2	600.335153	1198.65575	0.84166	0.00050528	-2.7416	-0.0016459	-1.9	-0.0011406	600.3333552176359	94.081	3.1031	94.242	93.043	96.146	0.16119					126	74	2	0	0	0	0.69931	1	9599	9599		31.634	1.1306	1	621100	+		59041	18800	39424	39440	66993	66993					0.0643705136067183
TQEHKAAVSV	10	Unmodified	_TQEHKAAVSV_					0	0	0		ENSG00000176681|ENST00000320254|LRRC37A;ENSG00000176809|ENST00000584306|LRRC37A3;ENSG00000238083|ENST00000576629|LRRC37A2;ENST00000570311.1_1_17:45126763-45127807:+|nuORF;ENST00000572638.1_1_17:44625595-44632942:+|nuORF	ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2865600585938	2	535.285463	1068.55637	0.074907	4.0097E-05	3.7457	0.002005	3.8206	0.0020451	535.2873650272661	86.055	0.9417	86.499	86.116	87.058	0.44331					50	22	3	0	0	0	0.67571	1	10091	10091		45.972	3.4978	1	1098700			59042	7094	39425	39441	66994	66994					0.02483653466561009
TQEIVGSVLV	10	Unmodified	_TQEIVGSVLV_					0	0	0			REV__ENST00000580790.1_1_10:75459274-75472997:-|nuORF	REV__ENST00000580790.1_1_10:75459274-75472997:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7427368164062	2	522.800414	1043.58628	-0.020662	-1.0802E-05	-1.0095	-0.00052774	-1.0301	-0.00053855	522.7996903119868	48.949	0.84486	49.409	48.985	49.83	0.45983					27	20	2	0	0	0	0.37624	1	4745	4745		31.53	13.205	1	119540	+		59043	29040	39426	39442	66995	66995					0.06622592411895312
TQELLVIL	8	Unmodified	_TQELLVIL_					0	0	0		ENST00000438412.5_1_6:30262511-30262622:-|nuORF	ENST00000438412.5_1_6:30262511-30262622:-|nuORF	ENST00000438412.5_1_6:30262511-30262622:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.789794921875	2	464.789318	927.564084	-1.1356	-0.00052781	3.8995	0.0018125	2.764	0.0012847	464.7910242247121	36.975	1.5496	36.999	36.145	37.695	0.023624					81	41	3	0	0	0	0.86288	1	2091	2091		26.796	0	1	297830			59044	11750	39427	39443	66996	66996					0.09740412734140591
TQESHRIIQ	9	Unmodified	_TQESHRIIQ_					0	0	0			REV__nc|ENSG00000196704|Q86W34-5|AMZ2	REV__nc|ENSG00000196704|Q86W34-5|AMZ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	556.2974853515625	2	556.296362	1110.57817	-0.91183	-0.00050725	4.3491	0.0024194	3.4373	0.0019121	556.2983390828923	68.987	0.50521	69.014	68.76	69.265	0.02636					37	21	2	0	0	0	0.51307	1	6537	6537		51.335	3.6781	1	110980	+		59045	23164	39428	39444	66997	66997					0.027304582151373324
TQETFEIVLPL	11	Unmodified	_TQETFEIVLPL_					0	0	0			REV__ENSG00000185624|ENST00000331483|P4HB	REV__ENSG00000185624|ENST00000331483|P4HB	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	645.8850708007812	2	645.353011	1288.69147	1.8646	0.0012033	4.4697	0.0028845	6.3343	0.0040879	645.3561285560518	105.8	1.0286	105.83	105.25	106.28	0.038322					36	24	2	0	0	0	0.1731	1	11569	11569		21.686	0	1	183920	+		59046	22781	39429	39445	66998	66998					0.05867088817649346
TQGGKLGR	8	Unmodified	_TQGGKLGR_					0	0	0		ENST00000428278.6_2_8:37963615-37963946:+|nuORF	ENST00000428278.6_2_8:37963615-37963946:+|nuORF	ENST00000428278.6_2_8:37963615-37963946:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.73944091796875	2	408.737951	815.46135	-0.047648	-1.9476E-05	4.4202	0.0018067	4.3725	0.0017872	408.73963408946304	36.955	2.5653	36.931	36.681	39.246	-0.023975					119	58	3	0	0	0	0.88185	1	2410	2410		32.812	1.2335	1	457600			59047	11593	39430	39446	66999	66999					0.04623764786038009
TQGKKRKA	8	Unmodified	_TQGKKRKA_					0	0	0		nc|ENSG00000153774|Q9UEE9-2|CFDP1;ENST00000566901.5_1_16:75428986-75467250:-|nuORF;ENSG00000153774|ENST00000283882|CFDP1	nc|ENSG00000153774|Q9UEE9-2|CFDP1	nc|ENSG00000153774|Q9UEE9-2|CFDP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.78729248046875	2	458.787976	915.561398	-1.7492	-0.00080251	0.76438	0.00035069	-0.98482	-0.00045182	458.7883137610394	92.976	2.4972	93.168	92.52	95.017	0.19239					169	59	5	0	0	0	0.87479	1	9363	9363		30.504	0	1	11606000			59048	5239	39431	39447	67000	67000					0.10024002119848774
TQGRLRLLIGL	11	Unmodified	_TQGRLRLLIGL_					0	0	0			REV__ENST00000444201.6_1_9:79074160-79115902:+|nuORF	REV__ENST00000444201.6_1_9:79074160-79115902:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.9324951171875	3	413.934706	1238.78229	-1.8077	-0.00074828	-2.9541	-0.0012228	-4.7618	-0.0019711	413.9334753019912	44.718	2.8382	44.718	44.154	46.992	0					147	70	3	0	0	0	0.72374	1	3343	3343		27.644	2.5179	1	588320	+		59049	25842	39432	39448	67001	67001					0.1724502237645993
TQGSGAARG	9	Unmodified	_TQGSGAARG_					0	0	0			REV__ENST00000597275.5_1_X:48911115-48911331:+|nuORF	REV__ENST00000597275.5_1_X:48911115-48911331:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.7014465332031	2	402.701566	803.388579	2.8107	0.0011319	2.5005	0.0010069	5.3112	0.0021388	402.7025728416904	25.135	0.51849	25.098	24.93	25.448	-0.037178					23	14	2	0	0	0	0.7932	1	975	975		19.997	1.6724	1	42731	+		59050	29264	39433	39449	67002	67002					-0.020979890073704155
TQGVPESILP	10	Unmodified	_TQGVPESILP_					0	0	0		ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A	ENSG00000042781|ENST00000307340|USH2A	ENSG00000042781|ENST00000307340|USH2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.818359375	2	520.784764	1039.55498	0.39797	0.00020725	2.9398	0.001531	3.3378	0.0017383	521.2871544548696	85.663	1.103	86.106	85.468	86.571	0.44331					41	26	3	0	0	0	0.37624	1	9939	9939		23.523	0	1	273870			59051	938	39434	39450	67003	67003					0.03678019377821329
TQHIWRILQA	10	Unmodified	_TQHIWRILQA_					0	0	0		ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A	ENSG00000073614|ENST00000399788|KDM5A	ENSG00000073614|ENST00000399788|KDM5A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.7118835449219	3	422.57529	1264.70404	0.57072	0.00024117	-0.71834	-0.00030355	-0.14762	-6.2382E-05	422.57503853077935	25.735	0.51127	25.478	25.302	25.813	-0.2572					22	11	3	0	0	0	0.37624	1	1352	1352		6.6596	0	1	58358			59052	1294	39435	39451	67004	67004					0.08227589791249557
TQHLKPVLL	9	Unmodified	_TQHLKPVLL_					0	0	0		ENST00000391973.6_1_2:242291796-242291901:+|nuORF	ENST00000391973.6_1_2:242291796-242291901:+|nuORF	ENST00000391973.6_1_2:242291796-242291901:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8271484375	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.75725	1	10241	10241		36.447	4.4919	1	15330000			59053	11003	39436	39452	67005	67005					0.12214899127980061
TQHLKPVLL	9	Unmodified	_TQHLKPVLL_					0	0	0		ENST00000391973.6_1_2:242291796-242291901:+|nuORF	ENST00000391973.6_1_2:242291796-242291901:+|nuORF	ENST00000391973.6_1_2:242291796-242291901:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.826904296875	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.58668	1	10267	10267		47.657	5.2612	1	23918000			59054	11003	39436	39452	67006	67006					0.12214899127980061
TQHLTIKG	8	Unmodified	_TQHLTIKG_					0	0	0			REV__ENSG00000171133|ENST00000302681|OR2K2	REV__ENSG00000171133|ENST00000302681|OR2K2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2608947753906	2	449.261259	896.507966	-1.3148	-0.0005907	-0.24675	-0.00011085	-1.5616	-0.00070155	449.26091050300573	68.569	0.72878	68.705	68.381	69.11	0.13522					52	29	2	0	0	0	0.87479	1	6183	6183		30.504	1.3541	1	207860	+		59055	21715	39437	39453	67007	67007					0.05557204617343814
TQHLYHPTQV	10	Unmodified	_TQHLYHPTQV_					0	0	0		nc|ENSG00000173068|Q6ZN30-2|BNC2;ENSG00000173068|ENST00000380672|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	nc|ENSG00000173068|Q6ZN30-2|BNC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.5427551269531	3	408.543767	1222.60947	0.40091	0.00016379	-1.6686	-0.0006817	-1.2677	-0.0005179	408.54300111388704	56.588	0.95171	57.148	56.572	57.523	0.55954					47	21	3	0	0	0	0.83284	1	5857	5857		37.6	2.4217	1	1238500			59056	6822	39438	39454	67008	67008					0.007070312492032826
TQHTVDVIFAF	11	Unmodified	_TQHTVDVIFAF_					0	0	0			REV__ENST00000256495.3_1_3:5025736-5025934:+|nuORF	REV__ENST00000256495.3_1_3:5025736-5025934:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.3028259277344	3	426.555672	1276.64519	-0.69288	-0.00029555	1.2941	0.00055201	0.60124	0.00025646	426.8904310759849	68.299	0.16524	68.263	68.165	68.33	-0.036293					7	5	2	0	0	0	0.17536	1	6588	6588		38.714	0	1	30220	+		59057	24327	39439	39455	67009	67009					0.017930687062289508
TQIAAAAPQ	9	Unmodified	_TQIAAAAPQ_					0	0	0			REV__nc|ENSG00000118513|P10242-9|MYB	REV__nc|ENSG00000118513|P10242-9|MYB	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.77972412109375	2	435.737617	869.460681	-1.9378	-0.00084438	1.8173	0.00079187	-0.12049	-5.2502E-05	435.73837809958025	36.158	0.4256	36.158	35.956	36.381	0					16	10	2	0	0	0	0.20789	1	2088	2088		26.693	0	1	36191	+		59058	29805	39440	39456	67010	67010					0.020729253463173336
TQISLSVH	8	Unmodified	_TQISLSVH_					0	0	0		ENSG00000164953|ENST00000453321|TMEM67;ENST00000474944.5_1_8:94767142-94822123:+|nuORF	ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.74481201171875	2	442.745442	883.476331	0.70525	0.00031225	-2.1241	-0.00094045	-1.4189	-0.0006282	442.7443686579111	91.271	2.0811	91.72	90.611	92.692	0.44958					87	49	3	0	0	0	0.90465	1	10806	10806		40.573	0	1	3166400			59059	6031	39441	39457	67011	67011					0.029932118633723803
TQISTPVL	8	Unmodified	_TQISTPVL_					0	0	0		ENST00000407418.7_1_22:39259990-39260104:-|nuORF	ENST00000407418.7_1_22:39259990-39260104:-|nuORF	ENST00000407418.7_1_22:39259990-39260104:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.75054931640625	2	429.750193	857.485833	0.60427	0.00025969	0.37111	0.00015949	0.97539	0.00041917	429.75036736011566	34.927	1.9228	35.138	34.854	36.777	0.21003					152	48	4	0	0	0	0.91472	1	2720	2720		44.117	3.3386	1	5113100			59060	11285	39442	39458	67012	67012					0.05138980148910832
TQIVVEEF	8	Unmodified	_TQIVVEEF_					0	0	0		ENSG00000115423|ENST00000389394|DNAH6;nc|ENSG00000115423|Q9C0G6-4|DNAH6;ENST00000602588.1_2_2:84885442-84924911:+|nuORF	ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.72991943359375	2	482.752933	963.491313	0.5946	0.00028705	-0.30748	-0.00014844	0.28712	0.00013861	482.7527032442209	76.482	0.66589	76.881	76.491	77.157	0.39969					42	18	3	0	0	0	0.4196	1	8657	8657		37.159	0	1	681060			59061	2844	39443	39459	67013	67013					0.008106589407248066
TQKLLSSV	8	Unmodified	_TQKLLSSV_					0	0	0			REV__ENST00000330736.9_1_16:89383456-89383540:-|nuORF	REV__ENST00000330736.9_1_16:89383456-89383540:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26312255859375	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.81897	1	2368	2368		20.947	1.587	1	3507500	+		59062	25116	39444	39460	67014	67014					0.07010669040232642
TQKMPQKVI	9	Unmodified	_TQKMPQKVI_					0	0	0		ENSG00000232125|ENST00000452335|DYTN	ENSG00000232125|ENST00000452335|DYTN	ENSG00000232125|ENST00000452335|DYTN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.3167724609375	2	536.812802	1071.61105	-0.797	-0.00042784	3.0387	0.0016312	2.2417	0.0012034	536.814366921359	60.785	0.72009	61.338	61.037	61.757	0.55323					38	22	2	0	0	0	0.76255	1	6497	6497		35.618	0	1	4216700			59063	8739	39445	39461	67015	67015					0.07810949013628488
TQLAAKKKATR	11	Unmodified	_TQLAAKKKATR_					0	0	0			REV__ENST00000395675.4_1_17:18575090-18575600:-|nuORF	REV__ENST00000395675.4_1_17:18575090-18575600:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25762939453125	3	405.922578	1214.7459	-0.83281	-0.00033806	1.0066	0.00040858	0.17374	7.0524E-05	406.2575538144286	57.155	0.21799	57.129	57.048	57.266	-0.026108					20	11	2	0	0	0	0.76892	1	4848	4848		17.833	1.3033	1	157660	+		59064	26117	39446	39462	67016	67016					0.14712145479734318
TQLAKLTQLLH	11	Unmodified	_TQLAKLTQLLH_					0	0	0			REV__ENST00000377191.4_1_20:21328787-21328991:+|nuORF	REV__ENST00000377191.4_1_20:21328787-21328991:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5936584472656	3	422.590717	1264.75032	1.8674	0.00078915	3.7839	0.001599	5.6513	0.0023882	422.5921368871922	54.454	3.0484	54.481	52.979	56.027	0.027142					207	86	4	0	0	0	0.78683	1	4917	4917		14.086	3.4992	1	997830	+		59065	25860	39447	39463	67017	67017					0.12853609902640528
TQLDLRDNKL	10	Unmodified	_TQLDLRDNKL_					0	0	0		ENSG00000081913|ENST00000262719|PHLPP1;nc|ENSG00000081913|O60346-2|PHLPP1	ENSG00000081913|ENST00000262719|PHLPP1	ENSG00000081913|ENST00000262719|PHLPP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5872497558594	3	405.894577	1214.6619	0.027886	1.1319E-05	0.27987	0.0001136	0.30775	0.00012492	405.89463176985873	30.705	0.84017	30.734	30.406	31.246	0.028618					38	18	3	0	0	0	0.37624	1	2054	2054		34.087	10.709	1	556780			59066	1474	39448	39464	67018	67018					0.06315569592175052
TQLGIEVSDPL	11	Unmodified	_TQLGIEVSDPL_					0	0	0			REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	586.314208984375	2	586.313886	1170.61322	-0.48604	-0.00028497	1.1546	0.00067697	0.66857	0.00039199	586.314229078803	85.369	0.81366	85.816	85.547	86.361	0.44736					46	19	4	0	0	0	0.33509	1	10004	10004		65.465	0	1	1112200	+		59067	16233	39449	39465	67019	67019					0.03473656232426947
TQLLARTCCE	10	Unmodified	_TQLLARTCCE_					0	0	0		ENSG00000185028|ENST00000328278|LRRC14B	ENSG00000185028|ENST00000328278|LRRC14B	ENSG00000185028|ENST00000328278|LRRC14B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.2750244140625	2	569.273183	1136.53181	-0.34666	-0.00019734	3.3159	0.0018877	2.9693	0.0016903	569.2749940936244	58.625	1.0905	58.617	58.275	59.365	-0.0074425					124	43	4	0	0	0	0.57924	1	5030	5030		51.193	1.6567	1	2598100			59068	7670	39450	39466	67020	67020					-0.03099066002823747
TQLLRIKEKH	10	Unmodified	_TQLLRIKEKH_					0	0	0			REV__nc|ENSG00000173818|Q8N8Q3-3|ENDOV;REV__nc|ENSG00000173818|Q8N8Q3-6|ENDOV	REV__nc|ENSG00000173818|Q8N8Q3-3|ENDOV	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.59228515625	3	422.594461	1264.76155	-1.7406	-0.00073557	-2.5077	-0.0010597	-4.2483	-0.0017953	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.8573	1	3844	3844		16.007	0	1	1126900	+		59069	30037;30038	39451	39467	67021	67021					0.13976431996775318
TQLLRIKEKH	10	Unmodified	_TQLLRIKEKH_					0	0	0			REV__nc|ENSG00000173818|Q8N8Q3-3|ENDOV;REV__nc|ENSG00000173818|Q8N8Q3-6|ENDOV	REV__nc|ENSG00000173818|Q8N8Q3-3|ENDOV	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.59332275390625	3	422.594461	1264.76155	-0.80517	-0.00034026	-3.0497	-0.0012888	-3.8549	-0.001629	422.59310710706274	46.905	2.5172	47.828	47.069	49.587	0.92315					149	61	4	0	0	0	0.8573	1	4441	4441		16.007	1.9208	1	3696000	+		59070	30037;30038	39451	39467	67022	67022					0.13976431996775318
TQLPALAH	8	Unmodified	_TQLPALAH_					0	0	0		ENST00000579572.1_1_17:80193878-80195110:+|nuORF	ENST00000579572.1_1_17:80193878-80195110:+|nuORF	ENST00000579572.1_1_17:80193878-80195110:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.29486083984375	2	425.742702	849.470852	-1.7319	-0.00073734	0.69391	0.00029543	-1.038	-0.00044191	425.7428569642234	76.056	1.4246	76.181	75.363	76.787	0.12485					68	42	2	0	0	0	0.4196	1	6998	6998		25.45	0	1	210280			59071	14088	39452	39468	67023	67023					0.040095330715644195
TQLSRVGKPLI	11	Unmodified	_TQLSRVGKPLI_					0	0	0		ENSG00000197816|ENST00000529487|CCDC180;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;nc|ENSG00000197816|Q9P1Z9|CCDC180	ENSG00000197816|ENST00000529487|CCDC180	ENSG00000197816|ENST00000529487|CCDC180	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5892639160156	3	404.587195	1210.73976	1.2344	0.00049943	2.6563	0.0010747	3.8907	0.0015741	404.5881712722995	41.372	1.4334	41.378	40.604	42.037	0.0065727					70	37	2	0	0	0	0.72892	1	3061	3061		26.75	7.487	1	244970			59072	8201	39453	39469	67024	67024					0.14281627248237783
TQLSSKIVNN	10	Unmodified	_TQLSSKIVNN_					0	0	0			REV__ENST00000421025.3_1_7:63727092-63727275:+|nuORF	REV__ENST00000421025.3_1_7:63727092-63727275:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3060302734375	2	552.306395	1102.59824	0.26261	0.00014504	-0.18156	-0.00010027	0.081052	4.4766E-05	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.51302	1	9506	9506		54.776	5.2403	1	1950800	+		59073	26493	39454	39470	67025	67025					0.051042091551153135
TQLVKIHVKTS	11	Unmodified	_TQLVKIHVKTS_					0	0	0			REV__nc|ENSG00000255374|P59539|TAS2R45	REV__nc|ENSG00000255374|P59539|TAS2R45	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3837890625	2	627.382437	1252.75032	0.97949	0.00061452	-1.4928	-0.00093658	-0.51334	-0.00032206	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.73621	1	12866	12866		25.126	2.5463	1	19815000	+		59074	30242	39455	39471	67026	67026					0.1340560990265658
TQLVKVDIH	9	Unmodified	_TQLVKVDIH_					0	0	0			REV__ENST00000502526.1_1_4:119659352-119659508:-|nuORF	REV__ENST00000502526.1_1_4:119659352-119659508:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8084716796875	2	526.808574	1051.60259	2.118	0.0011158	-3.9797	-0.0020965	-1.8617	-0.00098074	526.8064931441075	99.786	1.2202	100.12	99.379	100.6	0.33295					60	16	4	0	0	0	0.19818	1	12016	12016		74.255	2.9593	1	16521000	+		59075	27822	39456	39472	67027	67027					0.07885718368675043
TQLVKVDIH	9	Unmodified	_TQLVKVDIH_					0	0	0			REV__ENST00000502526.1_1_4:119659352-119659508:-|nuORF	REV__ENST00000502526.1_1_4:119659352-119659508:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.8084106445312	2	526.808574	1051.60259	2.1723	0.0011444	-3.985	-0.0020993	-1.8127	-0.00095493	526.806498827833	99.792	0.95116	100.16	99.637	100.59	0.36292					61	16	4	0	0	0	0.14386	1	12090	12090		84.916	18.486	1	16717000	+		59076	27822	39456	39472	67028	67028					0.07885718368675043
TQLVRLRA	8	Unmodified	_TQLVRLRA_					0	0	0		nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;nc|ENSG00000107736|Q9H251-6|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	nc|ENSG00000107736|Q9H251-4|CDH23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.8046569824219	2	478.803626	955.592698	0.24724	0.00011838	4.3933	0.0021035	4.6405	0.0022219	478.8055593968592	41.183	1.271	41.256	40.938	42.209	0.073414					62	33	2	0	0	0	0.84341	1	2728	2728		24.203	1.1603	1	199990			59077	2362	39457	39473	67029	67029					0.11312575153931448
TQLVSKSL	8	Unmodified	_TQLVSKSL_					0	0	0		ENSG00000159256|ENST00000400485|MORC3	ENSG00000159256|ENST00000400485|MORC3	ENSG00000159256|ENST00000400485|MORC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26300048828125	2	438.263468	874.512382	0.33791	0.0001481	-0.85545	-0.00037491	-0.51754	-0.00022682	438.26295010057623	41.781	6.0182	41.784	40.834	46.852	0.0034142					303	146	4	0	0	0	0.87479	1	3692	3692		30.504	0	1	4268300			59078	5518	39458	39474	67030	67030					0.07010669040232642
TQLWLFRHFIL	11	Unmodified	_TQLWLFRHFIL_					0	0	0			REV__ENST00000519310.1_1_19:57999245-58002845:+|nuORF	REV__ENST00000519310.1_1_19:57999245-58002845:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.795166015625	3	491.950357	1472.82924	0.28528	0.00014034	4.1258	0.0020297	4.4111	0.00217	491.95248415703566	43.544	0.2012	43.517	43.446	43.647	-0.026768					6	4	2	0	0	0	0.17955	1	3321	3321		23.378	14.166	1	63645	+		59079	28078	39459	39475	67031	67031					0.11173881927584262
TQMIFGRW	8	Unmodified	_TQMIFGRW_					0	0	0		ENST00000498143.5_1_10:75335378-75335680:-|nuORF	ENST00000498143.5_1_10:75335378-75335680:-|nuORF	ENST00000498143.5_1_10:75335378-75335680:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8203125	2	519.763112	1037.51167	0.62517	0.00032494	-2.4724	-0.0012851	-1.8473	-0.00096015	520.2591867553707	53.418	0.28801	53.832	53.663	53.951	0.4139					6	6	2	0	0	0	0.4196	1	5376	5376		11.511	0	1	38581			59080	12821	39460	39476	67032	67032					-0.0055844888047431596
TQMKSIRDAR	10	Unmodified	_TQMKSIRDAR_					0	0	0			REV__nc|ENSG00000135905|Q96BY6-3|DOCK10	REV__nc|ENSG00000135905|Q96BY6-3|DOCK10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2525939941406	3	402.552156	1204.63464	1.9685	0.00079242	-0.95226	-0.00038334	1.0162	0.00040908	402.5516298577653	20.915	1.1217	20.456	19.823	20.945	-0.4591					41	25	2	0	0	0	0.37624	1	733	733		36.318	7.7409	1	85389	+		59081	19264	39461	39477	67033	67033					0.04050762780138939
TQNGKDALNKG	11	Unmodified	_TQNGKDALNKG_					0	0	0			REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	REV__nc|ENSG00000125247|Q5T4D3-2|TMTC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.3007202148438	2	573.299101	1144.58365	0.13285	7.6165E-05	3.9286	0.0022523	4.0615	0.0023285	573.3010736764967	72.451	0.62146	72.493	72.174	72.796	0.042114					59	27	3	0	0	0	0.39278	1	6978	6978		59.931	5.1661	1	200220	+		59082	18631	39462	39478	67034	67034					0.017141370069339246
TQNGVAAVL	9	Unmodified	_TQNGVAAVL_					0	0	0			REV__ENSG00000178401|ENST00000549441|DNAJC22	REV__ENSG00000178401|ENST00000549441|DNAJC22	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.77471923828125	2	436.745442	871.476331	1.4098	0.00061573	-1.4541	-0.00063508	-0.044315	-1.9354E-05	436.74312748461557	90.877	0.35869	90.81	90.52	90.879	-0.067085					13	8	2	0	0	0	0.20789	1	9538	9538		21.96	0	1	52932	+		59083	22277	39463	39479	67035	67035					0.03545211863365694
TQNHLFPTLQP	11	Unmodified	_TQNHLFPTLQP_					0	0	0		ENST00000300087.6_1_16:23678674-23678917:+|nuORF	ENST00000300087.6_1_16:23678674-23678917:+|nuORF	ENST00000300087.6_1_16:23678674-23678917:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.2225036621094	3	432.562938	1294.66699	0.68658	0.00029699	-1.0289	-0.00044508	-0.34234	-0.00014809	432.5625185594248	61.999	0.43496	62.029	61.833	62.268	0.029575					22	15	2	0	0	0	0.17245	1	5780	5780		11.455	6.8113	1	72560			59084	9790	39464	39480	67036	67036					0.031438734548146385
TQNKLGGCF	9	Unmodified	_TQNKLGGCF_					0	0	0		ENST00000495554.1_1_1:153609122-153609314:+|nuORF	ENST00000495554.1_1_1:153609122-153609314:+|nuORF	ENST00000495554.1_1_1:153609122-153609314:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.2359619140625	2	484.236927	966.459301	0.65008	0.00031479	-1.834	-0.00088808	-1.1839	-0.00057328	484.23610614821564	85.519	1.189	85.667	85.254	86.442	0.14857					84	27	5	0	0	0	0.76996	1	8327	8327		33.516	1.5607	1	7052700			59085	12769	39465	39481	67037	67037					-0.025270320140862168
TQNLFVFW	8	Unmodified	_TQNLFVFW_					0	0	0		ENST00000235329.9_1_1:12040535-12042146:+|nuORF	ENST00000235329.9_1_1:12040535-12042146:+|nuORF	ENST00000235329.9_1_1:12040535-12042146:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.283447265625	2	527.77146	1053.52837	-0.55283	-0.00029177	-2.7567	-0.0014549	-3.3096	-0.0017467	527.7695517216978	59.708	0.36314	59.741	59.514	59.877	0.032822					14	8	2	0	0	0	0.4196	1	5508	5508		16.473	0	1	56595			59086	9232	39466	39482	67038	67038					0.0037437527712427254
TQNLKLAPV	9	Unmodified	_TQNLKLAPV_					0	0	0			REV__ENSG00000153207|ENST00000648844|AHCTF1	REV__ENSG00000153207|ENST00000648844|AHCTF1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.2999267578125	2	492.297842	982.581131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.518	1	59.518	59.018	60.018	0								0	0	0	0.30778	1	5180	5180		27.882	1.0861	1		+		59087	20337	39467	39483	67039	67039					0.08914333339930636
TQNVTSLLK	9	Unmodified	_TQNVTSLLK_					0	0	0		ENST00000564111.5_1_16:12070663-12146080:+|nuORF;nc|ENSG00000048471|Q8TEQ0-2|SNX29;ENSG00000048471|ENST00000566228|SNX29	ENST00000564111.5_1_16:12070663-12146080:+|nuORF	ENST00000564111.5_1_16:12070663-12146080:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.2689208984375	2	502.292756	1002.57096	-0.012762	-6.4103E-06	2.9025	0.0014579	2.8897	0.0014515	502.2950612368561	54.858	0.16827	55.265	55.16	55.328	0.40663					5	3	2	0	0	0	0.20789	1	5608	5608		44.377	7.2181	1	77485			59088	975	39468	39484	67040	67040					0.06977725614729025
TQNYLQPSQ	9	Unmodified	_TQNYLQPSQ_					0	0	0			REV__ENST00000494360.5_1_3:50144211-50147205:+|nuORF	REV__ENST00000494360.5_1_3:50144211-50147205:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.9393310546875	2	539.76182	1077.50909	0.64566	0.0003485	2.5287	0.0013649	3.1744	0.0017134	539.7631796411448	76.475	0.52975	76.426	76.14	76.67	-0.048264					26	16	2	0	0	0	0.20789	1	7552	7552		20.837	0	1	74822	+		59089	16054	39469	39485	67041	67041					-0.026566258044113056
TQPALLLI	8	Unmodified	_TQPALLLI_					0	0	0		nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7792663574219	2	434.778754	867.542954	-0.097946	-4.2585E-05	2.9953	0.0013023	2.8973	0.0012597	434.7799034741548	53.402	2.1549	53.397	52.578	54.733	-0.0053673					128	65	3	0	0	0	0.84341	1	4777	4777		24.203	0	1	357680			59090	15373	39470	39486	67042	67042					0.10388447425293634
TQPALLLI	8	Unmodified	_TQPALLLI_					0	0	0		nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7781677246094	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.86288	1	2307	2307		26.796	5.0938	1	3951300			59091	15373	39470	39486	67043	67043					0.10388447425293634
TQPALLLI	8	Unmodified	_TQPALLLI_					0	0	0		nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77886962890625	2	434.778754	867.542954	1.0906	0.00047416	1.4824	0.00064451	2.573	0.0011187	434.77927379886756	45.133	1.9101	45.129	44.288	46.198	-0.0041618					129	44	4	0	0	0	0.87922	1	3699	3699		31.955	2.8053	1	1333000			59092	15373	39470	39486	67044	67044					0.10388447425293634
TQPALLLI	8	Unmodified	_TQPALLLI_					0	0	0		nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7782287597656	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.86288	1	1899	1899		26.796	5.0938	1	2251100			59093	15373	39470	39486	67045	67045					0.10388447425293634
TQPALLLI	8	Unmodified	_TQPALLLI_					0	0	0		nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7779541015625	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.86288	1	1926	1926		26.796	6.3143	1	2158200			59094	15373	39470	39486	67046	67046					0.10388447425293634
TQPALLLI	8	Unmodified	_TQPALLLI_					0	0	0		nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7795104980469	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.90465	1	3771	3771		40.573	5.3719	1	2175000			59095	15373	39470	39486	67047	67047					0.10388447425293634
TQPALLLI	8	Unmodified	_TQPALLLI_					0	0	0		nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	nc|nan|Q8WUR7-3|C15orf40	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77935791015625	2	434.778754	867.542954	-0.61408	-0.00026699	3.3286	0.0014472	2.7146	0.0011802	434.78015323105376	52.924	3.3917	52.849	52.471	55.862	-0.074512					147	100	2	0	0	0	0.87922	1	4484	4484		31.955	1.4512	1	526750			59096	15373	39470	39486	67048	67048					0.10388447425293634
TQPARLQGL	9	Unmodified	_TQPARLQGL_					0	0	0		nc|ENSG00000103249|P51798-2|CLCN7;ENSG00000103249|ENST00000382745|CLCN7;ENST00000565092.6_1_16:1496634-1499128:-|nuORF;ENST00000563642.6_1_16:1496634-1499487:-|nuORF	nc|ENSG00000103249|P51798-2|CLCN7	nc|ENSG00000103249|P51798-2|CLCN7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.2880859375	2	492.285266	982.555979	1.6804	0.00082722	1.7616	0.0008672	3.442	0.0016944	492.28670249740594	110.53	1.1679	110.59	110.07	111.24	0.054062					79	40	3	0	0	0	0.78536	1	13364	13364		29.15	1.2673	1	260830			59097	2068	39471	39487	67049	67049					0.06400278537375925
TQPEGPLP	8	Unmodified	_TQPEGPLP_					0	0	0		ENST00000532003.5_1_8:144773289-144773370:+|nuORF;ENST00000526315.5_1_8:144766681-144773830:+|nuORF;ENST00000530341.1_1_8:144773205-144773830:+|nuORF	ENST00000532003.5_1_8:144773289-144773370:+|nuORF	ENST00000532003.5_1_8:144773289-144773370:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7177429199219	2	419.718893	837.423233	0.17461	7.3288E-05	-0.79184	-0.00033235	-0.61723	-0.00025906	419.7184802033485	43.588	1.0293	43.561	43.187	44.216	-0.026764					41	24	2	0	0	0	0.89962	1	3330	3330		38.806	0	1	235560			59098	13257	39472	39488	67050	67050					-0.0019816591928929483
TQPELAAPPLT	11	Unmodified	_TQPELAAPPLT_					0	0	0			REV__ENST00000523845.5_1_7:44260423-44302632:-|nuORF	REV__ENST00000523845.5_1_7:44260423-44302632:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.8112182617188	2	569.311146	1136.60774	0.37594	0.00021402	-0.41582	-0.00023673	-0.039882	-2.2705E-05	569.3110524639765	38.374	0.4283	38.316	38.108	38.536	-0.057915					20	12	2	0	0	0	0.69931	1	2264	2264		31.634	1.3165	1	85417	+		59099	16436	39473	39489	67051	67051					0.044899774406076176
TQPIVEILL	9	Unmodified	_TQPIVEILL_					0	0	0		ENSG00000102547|ENST00000409308|CAB39L	ENSG00000102547|ENST00000409308|CAB39L	ENSG00000102547|ENST00000409308|CAB39L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.31689453125	2	513.3157	1024.61685	-1.5202	-0.00078036	3.031	0.0015559	1.5108	0.00077549	513.3171098240366	43.168	1.3566	43.168	42.754	44.111	0					83	32	4	0	0	0	0.7932	1	3066	3066		24.203	0	1	698430			59100	2009	39474	39490	67052	67052					0.10552370796949617
TQPIVEILL	9	Unmodified	_TQPIVEILL_					0	0	0		ENSG00000102547|ENST00000409308|CAB39L	ENSG00000102547|ENST00000409308|CAB39L	ENSG00000102547|ENST00000409308|CAB39L	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3179931640625	2	513.3157	1024.61685	-1.4711	-0.00075512	3.5902	0.0018429	2.1191	0.0010878	513.3174116406972	46.45	1.1988	46.45	46.135	47.334	0					64	33	3	0	0	0	0.7932	1	3487	3487		23.042	0	1	153170			59101	2009	39474	39490	67053	67053					0.10552370796949617
TQPIVEILL	9	Unmodified	_TQPIVEILL_					0	0	0		ENSG00000102547|ENST00000409308|CAB39L	ENSG00000102547|ENST00000409308|CAB39L	ENSG00000102547|ENST00000409308|CAB39L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3170776367188	2	513.3157	1024.61685	-0.40505	-0.00020792	2.0459	0.0010502	1.6408	0.00084226	513.3166290585863	43.201	1.1169	43.206	42.933	44.05	0.0057487					65	27	3	0	0	0	0.78058	1	2993	2993		30.504	3.8107	1	350060			59102	2009	39474	39490	67054	67054					0.10552370796949617
TQPIVEILL	9	Unmodified	_TQPIVEILL_					0	0	0		ENSG00000102547|ENST00000409308|CAB39L	ENSG00000102547|ENST00000409308|CAB39L	ENSG00000102547|ENST00000409308|CAB39L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8160400390625	2	513.3157	1024.61685	-0.098595	-5.061E-05	1.9716	0.0010121	1.873	0.00096145	513.3165946643301	46.447	0.89642	46.368	46.111	47.007	-0.079002					41	23	2	0	0	0	0.7932	1	3438	3438		26.693	3.6504	1	187700			59103	2009	39474	39490	67055	67055					0.10552370796949617
TQPIVYGN	8	Unmodified	_TQPIVYGN_					0	0	0		nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	446.2315673828125	2	446.232168	890.449782	-0.14666	-6.5446E-05	-0.91184	-0.00040689	-1.0585	-0.00047234	446.2316665805217	103.94	1.9863	103.93	103.31	105.29	-0.0035706					126	47	4	0	0	0	0.89043	1	11208	11208		35.618	3.6634	1	2023800			59104	14964	39475	39491	67056	67056					0.00017522972052574914
TQPKLGSWK	9	Unmodified	_TQPKLGSWK_					0	0	0			REV__nc|ENSG00000124092|Q8NI51-2|CTCFL	REV__nc|ENSG00000124092|Q8NI51-2|CTCFL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.7952880859375	2	522.795466	1043.57638	0.60427	0.00031591	-0.4962	-0.00025941	0.10807	5.6498E-05	522.7953135933902	57.532	0.87128	58.087	57.601	58.472	0.55513					50	21	3	0	0	0	0.78983	1	5998	5998		27.882	1.1893	1	1292800	+		59105	29821	39476	39492	67057	67057					0.056334491971938405
TQPLGLVPS	9	Unmodified	_TQPLGLVPS_					0	0	0			REV__ENSG00000187860|ENST00000338306|CCDC157	REV__ENSG00000187860|ENST00000338306|CCDC157	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3011169433594	2	456.263468	910.512382	-0.036638	-1.6717E-05	-0.40111	-0.00018301	-0.43775	-0.00019973	456.2633571120809	34.404	0.12361	34.614	34.522	34.646	0.21002					4	2	2	0	0	0	0.20789	1	2547	2547		32.812	0	1	26476	+		59106	22957	39477	39493	67058	67058					0.05354669040241333
TQPLLPPTLSK	11	Unmodified	_TQPLLPPTLSK_					0	0	0			REV__chr1:145405307-145405405|19|17.84|0.79|4.51|-|0|NBPF20,None|1	REV__chr1:145405307-145405405|19|17.84|0.79|4.51|-|0|NBPF20,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8563232421875	2	597.858264	1193.70197	-0.56163	-0.00033577	-2.7129	-0.0016219	-3.2745	-0.0019577	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.69931	1	9715	9715		31.634	0.10446	1	6282800	+		59107	15411	39478	39494	67059	67059					0.11287116262747077
TQPLLPPTLSK	11	Unmodified	_TQPLLPPTLSK_					0	0	0			REV__chr1:145405307-145405405|19|17.84|0.79|4.51|-|0|NBPF20,None|1	REV__chr1:145405307-145405405|19|17.84|0.79|4.51|-|0|NBPF20,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8560180664062	2	597.858264	1193.70197	-0.4308	-0.00025756	-2.9714	-0.0017765	-3.4022	-0.002034	597.8562580242035	92.27	2.7665	92.315	90.514	93.28	0.045448					217	66	5	0	0	0	0.7144	1	9618	9618		29.17	2.4771	1	1998300	+		59108	15411	39478	39494	67060	67060					0.11287116262747077
TQPLLPPTLSK	11	Unmodified	_TQPLLPPTLSK_					0	0	0			REV__chr1:145405307-145405405|19|17.84|0.79|4.51|-|0|NBPF20,None|1	REV__chr1:145405307-145405405|19|17.84|0.79|4.51|-|0|NBPF20,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8552856445312	2	597.858264	1193.70197	0.8216	0.0004912	-4.2474	-0.0025393	-3.4258	-0.0020481	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.67041	2	9436	9436;9455		36.318	7.1476	1	2486400	+		59109	15411	39478	39494	67061;67062	67061					0.11287116262747077
TQPLQMDPCTP	11	Carbamidomethyl (C)	_TQPLQMDPC(Carbamidomethyl (C))TP_	TQPLQMDPC(1)TP		TQPLQMDPC(41)TP		0	1	0		ENST00000258145.7_1_12:65110441-65110558:-|nuORF	ENST00000258145.7_1_12:65110441-65110558:-|nuORF	ENST00000258145.7_1_12:65110441-65110558:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	644.2887573242188	2	644.28903	1286.56351	1.4334	0.00092354	-1.992	-0.0012834	-0.55858	-0.00035989	644.2876534496306	26.705	0.43338	26.677	26.459	26.893	-0.027706					17	8	3	0	0	0	0.62614	1	1158	1158		41.427	8.6142	1	56118			59110	9365	39479	39495	67063	67063	119				-0.06831118039531248
TQPLQMDPCTP	11	Carbamidomethyl (C)	_TQPLQMDPC(Carbamidomethyl (C))TP_					0	1	0		ENST00000258145.7_1_12:65110441-65110558:-|nuORF	ENST00000258145.7_1_12:65110441-65110558:-|nuORF	ENST00000258145.7_1_12:65110441-65110558:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	644.28903	1286.56351	0.60511	0.00038987	-1.4034	-0.0009042	-0.7983	-0.00051434	644.2880783192971	26.393	0.40066	26.438	26.181	26.582	0.045509	-0.11895	-0.00037125	NaN	41.427	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47358			59111	9365	39479	39495			119				-0.06831118039531248
TQPLRPAP	8	Unmodified	_TQPLRPAP_					0	0	0			REV__ENST00000313070.11_1_7:122526439-122526550:-|nuORF	REV__ENST00000313070.11_1_7:122526439-122526550:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	440.25445556640625	2	440.255977	878.497401	-0.82974	-0.0003653	-0.76393	-0.00033632	-1.5937	-0.00070162	440.2556367977485	60.313	1.0519	60.313	60.031	61.083	0.00051117					60	36	3	0	0	0	0.88915	1	5297	5297		35.201	6.9464	1	290170	+		59112	24921	39480	39496	67064	67064					0.05329221962892916
TQPLSALL	8	Unmodified	_TQPLSALL_					0	0	0			REV__ENST00000607742.5_1_6:158538757-158579378:-|nuORF	REV__ENST00000607742.5_1_6:158538757-158579378:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7520751953125	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.85277	1	7618	7618		25.45	0	1	579450	+		59113	18488	39481	39497	67065	67065					0.06383284011531032
TQPLVNTY	8	Unmodified	_TQPLVNTY_					0	0	0		nc|ENSG00000196091|Q00872-3|MYBPC1;nc|ENSG00000196091|Q00872-9|MYBPC1;nc|ENSG00000196091|Q00872-8|MYBPC1;nc|ENSG00000196091|Q00872|MYBPC1;nc|ENSG00000196091|Q00872-10|MYBPC1;nc|ENSG00000196091|Q00872-6|MYBPC1;nc|ENSG00000196091|Q00872-5|MYBPC1;nc|ENSG00000196091|Q00872-7|MYBPC1;nc|ENSG00000196091|Q00872-2|MYBPC1;ENSG00000196091|ENST00000361466|MYBPC1	nc|ENSG00000196091|Q00872-3|MYBPC1	nc|ENSG00000196091|Q00872-3|MYBPC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.2447814941406	2	468.245275	934.475997	2.7938	0.0013082	-3.9178	-0.0018345	-1.124	-0.00052631	468.2433163822993	105.83	2.1976	105.79	104.81	107.01	-0.03714					128	51	4	0	0	0	0.91472	1	11681	11681		44.117	5.3107	1	2085200			59114	15175	39482	39498	67066	67066					0.006137921435197313
TQPNMLVPYHL	11	Unmodified	_TQPNMLVPYHL_					0	0	0			REV__ENSG00000171561|ENST00000641541|OR2AT4	REV__ENSG00000171561|ENST00000641541|OR2AT4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2731018066406	3	438.228791	1311.66454	-1.4654	-0.00064216	0.77452	0.00033942	-0.69084	-0.00030275	438.56226160533095	106.04	0.1888	106.19	106.03	106.22	0.14842					5	4	2	0	0	0	0.17334	1	11331	11331		34.087	7.3368	1	35888	+		59115	21749	39483	39499	67067	67067					0.021177017254785824
TQPRALPP	8	Unmodified	_TQPRALPP_					0	0	0		ENST00000248450.8_1_2:219128952-219129252:-|nuORF	ENST00000248450.8_1_2:219128952-219129252:-|nuORF	ENST00000248450.8_1_2:219128952-219129252:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2550354003906	2	440.255977	878.497401	0.37519	0.00016518	-1.741	-0.00076649	-1.3658	-0.00060131	440.2550792506915	60.127	0.96645	60.243	59.965	60.931	0.11676					48	34	2	0	0	0	0.86288	1	5199	5199		26.796	2.2921	1	370110			59116	9281	39484	39500	67068	67068					0.053292219628815474
TQPRKIGAS	9	Unmodified	_TQPRKIGAS_					0	0	0		nc|ENSG00000156414|Q8NDG6-2|TDRD9;ENSG00000156414|ENST00000409874|TDRD9	nc|ENSG00000156414|Q8NDG6-2|TDRD9	nc|ENSG00000156414|Q8NDG6-2|TDRD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2772521972656	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.76764	1	7892	7892		34.173	1.3601	1	1785900			59117	5377	39485	39501	67069	67069					0.06031992020314192
TQPSLWAE	8	Unmodified	_TQPSLWAE_					0	0	0		ENSG00000121410|ENST00000263100|A1BG	ENSG00000121410|ENST00000263100|A1BG	ENSG00000121410|ENST00000263100|A1BG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2265930175781	2	466.229625	930.444697	-0.88051	-0.00041052	-3.8989	-0.0018178	-4.7794	-0.0022283	466.2279195068229	31.571	1.5978	31.651	30.989	32.587	0.079836					52	36	2	0	0	0	0.4196	1	2108	2108		37.812	0	1	149670			59118	3182	39486	39502	67070	67070					-0.023307808905883576
TQPSVPRR	8	Unmodified	_TQPSVPRR_					0	0	0		nc|ENSG00000258537|P0C7T7|FRMD6-AS1	nc|ENSG00000258537|P0C7T7|FRMD6-AS1	nc|ENSG00000258537|P0C7T7|FRMD6-AS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.76910400390625	2	470.769783	939.525013	0.3235	0.00015229	-1.7498	-0.00082374	-1.4263	-0.00067145	470.7688399761902	50.705	1.3688	50.755	50.372	51.741	0.049896					94	42	3	0	0	0	0.87922	1	4064	4064		31.955	5.2619	1	1304900			59119	15300	39487	39503	67071	67071					0.052831252231385406
TQPVVCRV	8	Unmodified	_TQPVVCRV_					0	0	0			REV__nc|ENSG00000172530|Q8N9N5-7|BANP	REV__nc|ENSG00000172530|Q8N9N5-7|BANP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.23980712890625	2	451.249837	900.485122	-0.14165	-6.3919E-05	-2.2206	-0.0010021	-2.3623	-0.001066	451.24867992302364	67.749	1.1743	67.771	67.401	68.576	0.021599					102	53	2	0	0	0	0.87479	1	6352	6352		30.504	6.3009	1	167670	+		59120	21839	39488	39504	67072	67072					0.0308986222820522
TQQAETDG	8	Unmodified	_TQQAETDG_					0	0	0			REV__ENSG00000108823|ENST00000262018|SGCA	REV__ENSG00000108823|ENST00000262018|SGCA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.25079345703125	2	425.182872	848.35119	1.5182	0.00064552	0.49382	0.00020996	2.012	0.00085548	425.1830792259836	98.066	0.57645	98.443	98.123	98.7	0.37679					18	13	2	0	0	0	0.4196	1	11800	11800		12.207	0	1	138810	+		59121	17733	39489	39505	67073	67073					-0.07905125063655305
TQQATPGP	8	Unmodified	_TQQATPGP_					0	0	0		nc|ENSG00000079385|P13688-2|CEACAM1;ENST00000377806.7_1_19:43023094-43032607:-|nuORF;nc|ENSG00000079385|P13688-8|CEACAM1;nc|ENSG00000079385|P13688-10|CEACAM1;ENSG00000079385|ENST00000161559|CEACAM1;nc|ENSG00000079385|P13688-7|CEACAM1;nc|ENSG00000079385|P13688-3|CEACAM1;ENSG00000086548|ENST00000199764|CEACAM6;ENST00000403136.1_1_19:43025413-43032607:-|nuORF;nc|ENSG00000079385|P13688-4|CEACAM1;ENST00000344391.9_1_19:43023158-43032553:-|nuORF;nc|ENSG00000079385|P13688-11|CEACAM1;nc|ENSG00000079385|P13688-9|CEACAM1;nc|ENSG00000079385|P13688-6|CEACAM1;nc|ENSG00000079385|P13688-5|CEACAM1;nc|ENSG00000105388|P06731-2|CEACAM5;ENSG00000105388|ENST00000221992|CEACAM5	nc|ENSG00000079385|P13688-2|CEACAM1;nc|ENSG00000105388|P06731-2|CEACAM5	nc|ENSG00000105388|P06731-2|CEACAM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2011413574219	2	400.200867	798.387182	-1.2405	-0.00049646	-2.0317	-0.00081307	-3.2722	-0.0013095	400.201810521261	68.411	1.2277	68.471	68.02	69.248	0.059288					82	51	3	0	0	0	0.90465	1	6129	6129		40.573	0	1	208600			59122	2212;1419	39490	39506	67074	67074					-0.020076230961535657
TQQKKKNN	8	Unmodified	_TQQKKKNN_					0	0	0		L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|2|1|sense	L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|2|1|sense	L1PB1_dup4090|chr5:60933580-60936769:-|1.219985234769877|0.124164192832443|3.3|63.0|2|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.78021240234375	2	494.780348	987.546142	-0.60063	-0.00029718	0.65872	0.00032592	0.05809	2.8742E-05	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.87064	1	8387	8387		29.15	0	1	707910			59123	14682	39491	39507	67075	67075					0.051870905319901794
TQQLIQLAV	9	Unmodified	_TQQLIQLAV_					0	0	0			REV__nc|ENSG00000173821|Q63HN8|RNF213	REV__nc|ENSG00000173821|Q63HN8|RNF213	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.25244140625	2	507.303124	1012.5917	1.3957	0.00070805	-2.6016	-0.0013198	-1.2058	-0.00061173	507.30152082676875	49.312	0.31977	50.183	50.06	50.38	0.87072					9	7	2	0	0	0	0.20789	1	4808	4808		19.997	0	1	122430	+		59124	21953	39492	39508	67076	67076					0.08590315994376851
TQQQLLLLPLL	11	Unmodified	_TQQQLLLLPLL_					0	0	0			REV__ENST00000552338.5_1_12:50571813-50589811:-|nuORF	REV__ENST00000552338.5_1_12:50571813-50589811:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.271484375	3	427.270984	1278.79112	1.165	0.00049778	-0.0039216	-1.6756E-06	1.1611	0.0004961	427.2710411965506	36.949	0.94741	37.435	37.078	38.025	0.48581					74	22	5	0	0	0	0.71207	1	2960	2960		29.551	0	1	4272200	+		59125	28622	39493	39509	67077	67077					0.16287951222284391
TQRLAPGASF	10	Unmodified	_TQRLAPGASF_					0	0	0		ENST00000493582.5_1_2:240274557-240323204:-|nuORF	ENST00000493582.5_1_2:240274557-240323204:-|nuORF	ENST00000493582.5_1_2:240274557-240323204:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7427368164062	2	524.282723	1046.55089	-0.10064	-5.2764E-05	-2.8104	-0.0014734	-2.911	-0.0015262	524.2811052616705	48.689	0.76417	49.152	49.029	49.793	0.46339					24	18	2	0	0	0	0.37624	1	4745	4745		24.519	13.654	1	326400			59126	12732	39494	39510	67078	67078					0.02947974674748366
TQRLVVTFV	9	Unmodified	_TQRLVVTFV_					0	0	0		ENSG00000160161|ENST00000291495|CILP2	ENSG00000160161|ENST00000291495|CILP2	ENSG00000160161|ENST00000291495|CILP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.81689453125	2	531.818941	1061.62333	-0.7527	-0.0004003	-3.1029	-0.0016502	-3.8556	-0.0020505	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.77546	1	8719	8719		31.955	0	1	2790600			59127	5557	39495	39511	67079	67079					0.09498308748334239
TQRPLIQTEK	10	Unmodified	_TQRPLIQTEK_					0	0	0			REV__nc|ENSG00000129003|Q709C8-4|VPS13C	REV__nc|ENSG00000129003|Q709C8-4|VPS13C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.2347412109375	3	405.234822	1212.68264	1.8026	0.00073046	-1.7002	-0.00068897	0.10238	4.149E-05	405.23409015354224	22.496	0.30561	22.077	21.97	22.276	-0.41879					9	6	2	0	0	0	0.37624	1	935	935		26.75	0	1	26803	+		59128	18801	39496	39512	67080	67080					0.08480159971827561
TQRQLTLPLA	10	Unmodified	_TQRQLTLPLA_					0	0	0			REV__ENSG00000127533|ENST00000248076|F2RL3	REV__ENSG00000127533|ENST00000248076|F2RL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8397216796875	2	570.840405	1139.66626	0.24304	0.00013874	-3.0157	-0.0017215	-2.7727	-0.0015827	570.8387431841412	50.551	0.65606	50.999	50.682	51.338	0.44761					39	15	4	0	0	0	0.86471	1	4963	4963		30.318	4.7437	1	2779100	+		59129	18740	39497	39513	67081	67081					0.10201078805766883
TQRRFGRQSH	10	Unmodified	_TQRRFGRQSH_					0	0	0			REV__ENST00000257789.4_1_6:88362964-88367651:+|nuORF	REV__ENST00000257789.4_1_6:88362964-88367651:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.30584716796875	3	424.893793	1271.65955	-0.094129	-3.9995E-05	1.8903	0.00080316	1.7961	0.00076316	425.2285715360957	38.227	0.50284	38.17	37.97	38.473	-0.057915					19	14	2	0	0	0	0.37624	1	2257	2257		11.097	0	1	38681	+		59130	24347	39498	39514	67082	67082					0.034585786977459065
TQRRKRRPPA	10	Unmodified	_TQRRKRRPPA_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.59246826171875	3	422.593566	1264.75887	-1.7406	-0.00073557	-0.38953	-0.00016461	-2.1301	-0.00090018	422.5933029836224	49.669	2.2578	49.669	48.66	50.918	0					179	54	4	0	0	0	0.85441	1	3822	3822		20.837	0.80668	1	1126900	+		59131	23147	39499	39515	67083	67083					0.13708021382512925
TQRRKRRPPA	10	Unmodified	_TQRRKRRPPA_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.3843994140625	2	633.386711	1264.75887	-0.047261	-2.9934E-05	-2.0767	-0.0013153	-2.1239	-0.0013453	633.3851991491786	51.452	1.7221	51.45	50.349	52.071	-0.0020447					76	46	2	0	0	0	0.85633	1	4384	4384		10.866	5.3077	1	76796	+		59132	23147	39499	39515	67084	67084					0.13708021382512925
TQRRKRRPPA	10	Unmodified	_TQRRKRRPPA_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.59173583984375	3	422.593566	1264.75887	-0.18605	-7.8623E-05	-2.0571	-0.00086932	-2.2432	-0.00094794	422.59257278124653	58.831	1.5397	58.817	57.968	59.508	-0.013729					80	49	3	0	0	0	0.85441	2	5372	5352;5372		31.634	9.0727	1	107360	+		59133	23147	39499	39515	67085;67086	67086					0.13708021382512925
TQRRKRRPPA	10	Unmodified	_TQRRKRRPPA_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5897521972656	3	422.593566	1264.75887	-0.25442	-0.00010752	-1.9705	-0.00083272	-2.2249	-0.00094023	422.59266079937345	57.115	1.709	57.086	56.583	58.292	-0.02866					127	51	4	0	0	0	0.86338	1	5341	5341		31.634	3.0575	1	391180	+		59134	23147	39499	39515	67087	67087					0.13708021382512925
TQRRKRRPPA	10	Unmodified	_TQRRKRRPPA_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5931091308594	3	422.593566	1264.75887	-0.015219	-6.4315E-06	-2.0191	-0.00085325	-2.0343	-0.00085968	422.5925783921211	58.971	2.9474	58.94	58.062	61.01	-0.030884					151	84	3	0	0	0	0.85441	2	5556	5533;5556		20.837	1.8252	1	166800	+		59135	23147	39499	39515	67088;67089	67089					0.13708021382512925
TQRRKRRPPA	10	Unmodified	_TQRRKRRPPA_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59259033203125	3	422.593566	1264.75887	0.33778	0.00014274	-2.7713	-0.0011711	-2.4335	-0.0010284	422.5923327549996	56.605	1.259	56.704	56.541	57.8	0.099186					96	58	2	0	0	0	0.85285	1	4773	4773		16.717	3.2094	1	698260	+		59136	23147	39499	39515	67090	67090					0.13708021382512925
TQRTGLGRRP	10	Unmodified	_TQRTGLGRRP_					0	0	0		ENST00000306243.6_1_15:40764549-40764810:+|nuORF	ENST00000306243.6_1_15:40764549-40764810:+|nuORF	ENST00000306243.6_1_15:40764549-40764810:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	571.3316650390625	2	571.33107	1140.64759	-1.3827	-0.00078998	1.1971	0.00068393	-0.18562	-0.00010605	571.3317717910289	102.19	3.5699	102.32	101.59	105.16	0.1357					156	88	4	0	0	0	0.86348	1	10743	10743		31.53	2.3803	1	3715400			59137	9857	39500	39516	67091	67091					0.0828896195453126
TQRVMEAEQTK	11	Unmodified	_TQRVMEAEQTK_					0	0	0		ENSG00000131370|ENST00000383791|SH3BP5;nc|ENSG00000131370|O60239-2|SH3BP5	ENSG00000131370|ENST00000383791|SH3BP5	ENSG00000131370|ENST00000383791|SH3BP5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2914123535156	3	440.890726	1319.65035	0.37165	0.00016386	-3.269	-0.0014413	-2.8974	-0.0012774	441.2242255415383	59.718	0.13535	59.832	59.798	59.933	0.11396					6	4	2	0	0	0	0.17301	1	5153	5153		13.73	2.0936	1	24758			59138	3723	39501	39517	67092	67092					0.003310045065063605
TQRVPLLHPR	10	Unmodified	_TQRVPLLHPR_					0	0	0		ENST00000578067.5_1_17:61776427-61776743:-|nuORF	ENST00000578067.5_1_17:61776427-61776743:-|nuORF	ENST00000578067.5_1_17:61776427-61776743:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2496032714844	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.73	1	113.71	113.21	114.21	-0.024811								0	0	0	0.45132	1	12588	12588		18.531	1.8137	1				59139	14076	39502	39518	67093	67093					0.12079296028105091
TQSAQPQSPAQ	11	Unmodified	_TQSAQPQSPAQ_					0	0	0			REV__ENSG00000184271|ENST00000333640|POU6F1	REV__ENSG00000184271|ENST00000333640|POU6F1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	572.2784423828125	2	571.775459	1141.53637	0.13421	7.6737E-05	3.8846	0.0022211	4.0188	0.0022979	571.777651065585	55.822	0.33825	55.853	55.652	55.991	0.030838					14	8	2	0	0	0	0.16892	1	5026	5026		35.178	15.818	1	64004	+		59140	22659	39503	39519	67094	67094					-0.028741422640678138
TQSEEFNVL	9	Unmodified	_TQSEEFNVL_					0	0	0			REV__ENSG00000117560|ENST00000367721|FASLG	REV__ENSG00000117560|ENST00000367721|FASLG	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.2374267578125	2	533.756204	1065.49785	0.72399	0.00038644	-0.90806	-0.00048468	-0.18406	-9.8246E-05	533.7552976982901	35.967	0.34383	36.215	35.97	36.314	0.24769					18	8	3	0	0	0	0.20789	1	2752	2752		40.778	0	1	510640	+		59141	18269	39504	39520	67095	67095					-0.03227447898552782
TQSHLSWY	8	Unmodified	_TQSHLSWY_					0	0	0		ENSG00000102302|ENST00000375135|FGD1	ENSG00000102302|ENST00000375135|FGD1	ENSG00000102302|ENST00000375135|FGD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2389221191406	2	511.240524	1020.46649	-0.45697	-0.00023362	-3.4697	-0.0017738	-3.9267	-0.0020075	511.2386039961532	51.045	1.5771	51.021	50.12	51.697	-0.02343					57	43	2	0	0	0	0.89962	1	4471	4471		38.806	10.552	1	99648			59142	1998	39505	39521	67096	67096					-0.042919761420193936
TQSKHVRITIL	11	Unmodified	_TQSKHVRITIL_					0	0	0		ENSG00000186130|ENST00000373659|ZBTB6	ENSG00000186130|ENST00000373659|ZBTB6	ENSG00000186130|ENST00000373659|ZBTB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3975219726562	2	648.393336	1294.77212	2.6466	0.001716	-3.9241	-0.0025444	-1.2775	-0.00082835	648.3907938833173	114.19	1.0061	114.17	113.59	114.59	-0.024452					48	34	2	0	0	0	0.68532	1	12682	12682		33.922	0.40605	1	216020			59143	7776	39506	39522	67097	67097					0.13652414651232903
TQSSARKC	8	Unmodified	_TQSSARKC_					0	0	0		ENST00000570217.1_1_16:89972581-89984411:+|nuORF	ENST00000570217.1_1_16:89972581-89984411:+|nuORF	ENST00000570217.1_1_16:89972581-89984411:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.7187805175781	2	440.718901	879.42325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.117	1	63.084	62.584	63.584	-0.033714								0	0	0	0.29871	1	5983	5983		23.042	1.3402	1				59144	13993	39507	39523	67098	67098					-0.02128489190943128
TQSSARLH	8	Unmodified	_TQSSARLH_					0	0	0			REV__ENST00000461783.7_3_6:155574137-155575116:+|nuORF	REV__ENST00000461783.7_3_6:155574137-155575116:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.9137268066406	2	450.238316	898.462078	-0.83329	-0.00037518	-1.8206	-0.00081971	-2.6539	-0.0011949	450.23842191430896	37.162	0.26725	37.173	36.973	37.24	0.011173					8	5	2	0	0	0	0.4196	1	2438	2438		3.1592	0	1	18978	+		59145	27036	39508	39524	67099	67099					0.00878559435079751
TQTASDVPVL	10	Unmodified	_TQTASDVPVL_					0	0	0		nc|ENSG00000283706|Q9UI38|PRSS50	nc|ENSG00000283706|Q9UI38|PRSS50	nc|ENSG00000283706|Q9UI38|PRSS50	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7730712890625	2	515.774396	1029.53424	-0.26725	-0.00013784	-0.11328	-5.8427E-05	-0.38054	-0.00019627	515.7735890389749	44.713	0.85175	45.177	44.865	45.717	0.46313					34	20	3	0	0	0	0.73395	1	4127	4127		42.864	0	1	824800			59146	15322	39509	39525	67100	67100					0.02065428998139396
TQTASDVPVL	10	Unmodified	_TQTASDVPVL_					0	0	0		nc|ENSG00000283706|Q9UI38|PRSS50	nc|ENSG00000283706|Q9UI38|PRSS50	nc|ENSG00000283706|Q9UI38|PRSS50	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	515.774396	1029.53424	-1.0055	-0.0005186	-0.35428	-0.00018273	-1.3598	-0.00070133	515.7740070634085	44.438	0.43777	45.282	45.106	45.544	0.84438	0.052984	-5.1232E-05	NaN	42.864	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	864100			59147	15322	39509	39525							0.02065428998139396
TQTQKPRV	8	Unmodified	_TQTQKPRV_					0	0	0		chr18:24674459-24679113|33|125.73|0.0|23.58|+|0|TE_info:L2,L2_dup51975,L2,LINE,acceptor,+,24679113,24679400|LINC01915,None|2	chr18:24674459-24679113|33|125.73|0.0|23.58|+|0|TE_info:L2,L2_dup51975,L2,LINE,acceptor,+,24679113,24679400|LINC01915,None|2	chr18:24674459-24679113|33|125.73|0.0|23.58|+|0|TE_info:L2,L2_dup51975,L2,LINE,acceptor,+,24679113,24679400|LINC01915,None|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2781677246094	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.8347	1	8152	8152		23.042	0	1	2070000			59148	247	39510	39526	67101	67101					0.060319920203255606
TQTRGRRQVGN	11	Unmodified	_TQTRGRRQVGN_					0	0	0		ENST00000265087.8_1_5:172755569-172756019:-|nuORF	ENST00000265087.8_1_5:172755569-172756019:-|nuORF	ENST00000265087.8_1_5:172755569-172756019:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2561340332031	3	424.900836	1271.68068	0.56337	0.00023938	1.6315	0.00069323	2.1949	0.00093261	424.90154636269654	33.122	0.29681	33.292	33.145	33.442	0.16971					11	6	2	0	0	0	0.17368	1	2356	2356		28.577	6.7963	1	113140			59149	9497	39511	39527	67102	67102					0.05570544006604905
TQTRGRRQVGN	11	Unmodified	_TQTRGRRQVGN_					0	0	0		ENST00000265087.8_1_5:172755569-172756019:-|nuORF	ENST00000265087.8_1_5:172755569-172756019:-|nuORF	ENST00000265087.8_1_5:172755569-172756019:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	424.900836	1271.68068	-0.053221	-2.2613E-05	3.1636	0.0013442	3.1104	0.0013216	424.9023088035639	33.512	0.24541	33.515	33.39	33.636	0.0030785	0.11162	0.0015099	NaN	39.873	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9632.8			59150	9497	39511	39527							0.05570544006604905
TQVGNLIP	8	Unmodified	_TQVGNLIP_					0	0	0		ENSG00000122735|ENST00000242317|DNAI1	ENSG00000122735|ENST00000242317|DNAI1	ENSG00000122735|ENST00000242317|DNAI1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.240966796875	2	421.242535	840.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.982	1	74.025	73.525	74.525	0.043648								0	0	0	0.29497	1	7142	7142		34.173	0	1				59151	3244	39512	39528	67103	67103					0.04390113351723812
TQVHILRLLCI	11	Unmodified	_TQVHILRLLCI_					0	0	0		ENST00000382004.7_1_9:3221866-3221968:-|nuORF	ENST00000382004.7_1_9:3221866-3221968:-|nuORF	ENST00000382004.7_1_9:3221866-3221968:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.93359375	3	436.932197	1307.77476	0.498	0.00021759	3.5519	0.001552	4.0499	0.0017695	436.93369927878706	20.732	2.5953	20.273	19.595	22.19	-0.4591					152	59	4	0	0	0	0.74405	1	713	713		23.378	0	1	492360			59152	10967	39513	39529	67104	67104					0.1331854678455784
TQVHILRLLCI	11	Unmodified	_TQVHILRLLCI_					0	0	0		ENST00000382004.7_1_9:3221866-3221968:-|nuORF	ENST00000382004.7_1_9:3221866-3221968:-|nuORF	ENST00000382004.7_1_9:3221866-3221968:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.9335021972656	3	436.932197	1307.77476	0.27454	0.00011996	3.7725	0.0016483	4.047	0.0017683	436.9337888157145	20.681	2.5222	20.051	19.49	22.012	-0.62961					153	62	4	0	0	0	0.72374	1	736	736		27.644	5.8635	1	646260			59153	10967	39513	39529	67105	67105					0.1331854678455784
TQVLSRFTSQQ	11	Unmodified	_TQVLSRFTSQQ_					0	0	0		ENST00000607039.1_1_1:112999611-113005178:+|nuORF;ENSG00000143079|ENST00000271277|CTTNBP2NL	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	647.8429565429688	2	647.841133	1293.66771	0.12653	8.1973E-05	-0.25713	-0.00016658	-0.13059	-8.4604E-05	647.8410014258048	50.224	0.52867	50.221	49.949	50.478	-0.0030365					19	12	2	0	0	0	0.6493	1	4238	4238		38.754	5.9412	1	97858			59154	4599	39514	39530	67106	67106					0.032626681038664174
TQVLSRFTSQQ	11	Unmodified	_TQVLSRFTSQQ_					0	0	0		ENST00000607039.1_1_1:112999611-113005178:+|nuORF;ENSG00000143079|ENST00000271277|CTTNBP2NL	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	647.841133	1293.66771	-0.74475	-0.00048248	1.7981	0.0011649	1.0533	0.00068239	647.8413977302994	50.32	0.59669	50.32	50.06	50.657	0	0.039062	0.002136	NaN	38.754	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65431			59155	4599	39514	39530							0.032626681038664174
TQVLSRFTSQQ	11	Unmodified	_TQVLSRFTSQQ_					0	0	0		ENST00000607039.1_1_1:112999611-113005178:+|nuORF;ENSG00000143079|ENST00000271277|CTTNBP2NL	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	647.841133	1293.66771	-0.84869	-0.00054981	0.8418	0.00054535	-0.0068919	-4.4649E-06	647.8416812394439	50.18	0.57129	50.156	49.9	50.472	-0.02343	-0.12475	0.00089696	NaN	38.754	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105280			59156	4599	39514	39530							0.032626681038664174
TQVLSRFTSQQ	11	Unmodified	_TQVLSRFTSQQ_					0	0	0		ENST00000607039.1_1_1:112999611-113005178:+|nuORF;ENSG00000143079|ENST00000271277|CTTNBP2NL	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	647.841133	1293.66771	0.98401	0.00063748	-0.69418	-0.00044972	0.28983	0.00018776	647.8403396774106	50.209	0.43998	50.213	50.032	50.472	0.0035973	-0.068147	-0.0010932	NaN	38.754	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92854			59157	4599	39514	39530							0.032626681038664174
TQVLSRFTSQQ	11	Unmodified	_TQVLSRFTSQQ_					0	0	0		ENST00000607039.1_1_1:112999611-113005178:+|nuORF;ENSG00000143079|ENST00000271277|CTTNBP2NL	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	647.841133	1293.66771	0.49046	0.00031774	-0.78847	-0.00051081	-0.29801	-0.00019307	647.8407904581143	50.415	0.4258	50.465	50.186	50.612	0.049896	0.18391	-0.0012154	NaN	38.754	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65713			59158	4599	39514	39530							0.032626681038664174
TQVLSRFTSQQ	11	Unmodified	_TQVLSRFTSQQ_					0	0	0		ENST00000607039.1_1_1:112999611-113005178:+|nuORF;ENSG00000143079|ENST00000271277|CTTNBP2NL	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	ENST00000607039.1_1_1:112999611-113005178:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	647.841133	1293.66771	0.19473	0.00012615	-0.64385	-0.00041711	-0.44912	-0.00029096	648.3424519896399	50.403	0.30043	50.311	50.15	50.451	-0.091797	0.030094	-0.001028	NaN	38.754	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122310			59159	4599	39514	39530							0.032626681038664174
TQVVISRIT	9	Unmodified	_TQVVISRIT_					0	0	0		ENSG00000156398|ENST00000369893|SFXN2	ENSG00000156398|ENST00000369893|SFXN2	ENSG00000156398|ENST00000369893|SFXN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.8077697753906	2	508.808574	1015.60259	0.84861	0.00043178	-3.1233	-0.0015892	-2.2747	-0.0011574	508.8072597473503	83.541	2.7911	83.472	82.015	84.806	-0.069313					129	64	3	0	0	0	0.7932	1	8530	8530		25.574	1.0549	1	2497800			59160	5376	39515	39531	67107	67107					0.09541718368643615
TQYFVELAFS	10	Unmodified	_TQYFVELAFS_					0	0	0			REV__ENSG00000142327|ENST00000270357|RNPEPL1	REV__ENSG00000142327|ENST00000270357|RNPEPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	602.7866821289062	2	602.797872	1203.58119	-1.114	-0.00067154	-0.97367	-0.00058693	-2.0877	-0.0012585	602.796126618129	50.839	0.23336	50.846	50.692	50.925	0.0077438					18	10	2	0	0	0	0.86587	1	4358	4358		29.17	0	1	151080	+		59161	19737	39516	39532	67108	67108					-0.012457114507014921
TQYRSEQQLKW	11	Unmodified	_TQYRSEQQLKW_					0	0	0			REV__ENSG00000171124|ENST00000303225|FUT3	REV__ENSG00000171124|ENST00000303225|FUT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.91552734375	3	489.584402	1465.73138	-2.4175	-0.0011836	-2.4231	-0.0011863	-4.8406	-0.0023699	489.58298583528295	67.595	0.74777	67.625	67.273	68.021	0.030563					62	29	4	0	0	0	0.76087	1	6419	6419		19.627	2.4602	1	130780	+		59162	18873	39517	39533	67109	67109					0.017140285409368516
TRAAPPGLP	9	Unmodified	_TRAAPPGLP_					0	0	0		nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.2553405761719	2	440.255977	878.497401	-1.1281	-0.00049663	-0.16476	-7.2535E-05	-1.2928	-0.00056917	440.2557479543984	62.714	1.4312	63.102	62.273	63.704	0.3878					74	32	3	0	0	0	0.7932	1	6684	6684		24.203	3.7209	1	707290			59163	14984	39518	39534	67110	67110					0.05329221962904285
TRADRYKKAL	10	Unmodified	_TRADRYKKAL_					0	0	0			REV__ENST00000578904.1_1_17:80208040-80213403:-|nuORF	REV__ENST00000578904.1_1_17:80208040-80213403:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3556518554688	2	611.356754	1220.69895	1.1383	0.00069592	-2.4619	-0.0015051	-1.3236	-0.0008092	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.86218	1	9575	9575		32.812	1.2826	1	7316900	+		59164	19694	39519	39535	67111	67111					0.09743285928607293
TRAHVFQI	8	Unmodified	_TRAHVFQI_					0	0	0		ENST00000599808.1_1_19:19049437-19049791:-|nuORF;nc|ENSG00000051128|Q9NSC5-4|HOMER3;nc|ENSG00000051128|Q9NSC5-3|HOMER3;nc|ENSG00000152413|Q86YM7-3|HOMER1;nc|ENSG00000152413|Q86YM7-2|HOMER1;nc|ENSG00000051128|Q9NSC5-5|HOMER3;ENSG00000103942|ENST00000450735|HOMER2;nc|ENSG00000103942|Q9NSB8|HOMER2;ENSG00000152413|ENST00000334082|HOMER1;nc|ENSG00000051128|Q9NSC5-2|HOMER3;ENSG00000051128|ENST00000392351|HOMER3	ENST00000599808.1_1_19:19049437-19049791:-|nuORF	ENST00000599808.1_1_19:19049437-19049791:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.7762145996094	2	486.274701	970.534849	-0.71967	-0.00034996	-2.3608	-0.001148	-3.0805	-0.001498	486.2735178853531	71.512	0.62209	71.896	71.628	72.25	0.38449					32	14	3	0	0	0	0.4196	1	7935	7935		25.45	1.2474	1	204810			59165	998	39520	39536	67112	67112					0.04840313228521609
TRALLFALFL	10	Unmodified	_TRALLFALFL_					0	0	0		ENSG00000172640|ENST00000310248|OR10AD1	ENSG00000172640|ENST00000310248|OR10AD1	ENSG00000172640|ENST00000310248|OR10AD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.8600463867188	2	582.860609	1163.70667	-0.28183	-0.00016427	-2.2561	-0.001315	-2.5379	-0.0014793	582.859187091666	109.27	0.26681	109.27	109.16	109.43	0					28	13	3	0	0	0	0.8488	1	11355	11355		17.365	0.89182	1	3453900			59166	6781	39521	39537	67113	67113					0.1313604519616547
TRARITVAS	9	Unmodified	_TRARITVAS_					0	0	0		nc|ENSG00000071909|Q8WXR4-5|MYO3B;ENST00000438642.6_1_2:171034716-171400468:+|nuORF;nc|ENSG00000071909|Q8WXR4-6|MYO3B;ENST00000409940.6_1_2:171034716-171376051:+|nuORF;nc|ENSG00000071909|Q8WXR4-3|MYO3B;nc|ENSG00000071909|Q8WXR4-2|MYO3B;nc|ENSG00000071909|Q8WXR4-4|MYO3B;ENSG00000071909|ENST00000408978|MYO3B;nc|ENSG00000071909|Q8WXR4-7|MYO3B;ENST00000602629.1_1_2:171225816-171400468:+|nuORF	nc|ENSG00000071909|Q8WXR4-5|MYO3B	nc|ENSG00000071909|Q8WXR4-5|MYO3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7905578613281	2	487.790715	973.566878	0.84663	0.00041298	-1.0594	-0.00051676	-0.21277	-0.00010379	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.7932	1	8567	8567		25.574	2.5316	1	2238600			59167	11754	39522	39538	67114	67114					0.0790368091164737
TRARVSPL	8	Unmodified	_TRARVSPL_					0	0	0			REV__ENST00000372748.7_1_1:40782817-40782946:-|nuORF	REV__ENST00000372748.7_1_1:40782817-40782946:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7557678222656	2	450.274701	898.534849	0.58428	0.00026309	-0.58813	-0.00026482	-0.0038512	-1.7341E-06	450.2743448955494	81.791	1.8145	81.937	81.24	83.054	0.1455					89	41	3	0	0	0	0.4196	1	7850	7850		15.642	0	1	274870	+		59168	25732	39523	39539	67115	67115					0.08152313228526964
TRASCWCR	8	Unmodified	_TRASCWCR_					0	0	0		ENST00000529787.2_1_9:100053158-100088872:+|nuORF	ENST00000529787.2_1_9:100053158-100088872:+|nuORF	ENST00000529787.2_1_9:100053158-100088872:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7188415527344	2	491.720921	981.427289	1.0156	0.0004994	-1.9402	-0.00095406	-0.92463	-0.00045466	491.7199519041639	19.523	0.26768	19.594	19.479	19.746	0.071127					10	8	2	0	0	0	0.884	1	405	405		33.516	1.5607	1	20114			59169	13333	39524	39540	67116	67116					-0.06416722968867816
TRDAFSDSE	9	Unmodified	_TRDAFSDSE_					0	0	0		nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-6|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.2199096679688	2	514.219985	1026.42542	0.27738	0.00014263	-0.31553	-0.00016225	-0.038148	-1.9616E-05	514.2197149185718	29.944	1.3268	29.929	29.112	30.438	-0.015167					73	38	4	0	0	0	0.38563	1	1526	1526		58.782	5.4305	1	411270			59170	15007	39525	39541	67117	67117					-0.08673781972129291
TRDALCKDRY	10	Unmodified	_TRDALCKDRY_					0	0	0			REV__CON__REFSEQ:XP_585019	REV__CON__REFSEQ:XP_585019	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	620.8090209960938	2	620.808779	1239.60301	-0.56995	-0.00035383	-0.15115	-9.3834E-05	-0.7211	-0.00044766	620.8089892457849	59.564	1.2818	59.955	59.441	60.723	0.39077					85	32	5	0	0	0	0.86106	1	6319	6319		33.922	2.3918	1	3018100	+	+	59171	16034	39526	39542	67118	67118					-0.007212299738057482
TRELVPPIVL	10	Unmodified	_TRELVPPIVL_					0	0	0			REV__ENSG00000068878|ENST00000404125|PSME4	REV__ENSG00000068878|ENST00000404125|PSME4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8533325195312	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.67608	4	10508	10450;10485;10508;10580		45.952	5.237	1	34546000	+		59172	16568	39527	39543	67119;67120;67121;67122	67121					0.1340743747093711
TRELVPPIVL	10	Unmodified	_TRELVPPIVL_					0	0	0			REV__ENSG00000068878|ENST00000404125|PSME4	REV__ENSG00000068878|ENST00000404125|PSME4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8533935546875	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.74274	2	11035	11035;11059		42.396	5.237	1	50786000	+		59173	16568	39527	39543	67123;67124	67123					0.1340743747093711
TREPEQEQS	9	Unmodified	_TREPEQEQS_					0	0	0		nc|ENSG00000175556|Q496Y0-2|LONRF3;ENSG00000175556|ENST00000371628|LONRF3;nc|ENSG00000175556|Q496Y0-3|LONRF3	nc|ENSG00000175556|Q496Y0-2|LONRF3	nc|ENSG00000175556|Q496Y0-2|LONRF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.2532958984375	2	552.251817	1102.48908	1.2806	0.00070722	2.9036	0.0016035	4.1842	0.0023107	552.2532948797596	111.44	1.2081	111.47	110.85	112.06	0.030388					69	46	2	0	0	0	0.77696	1	12201	12201		31.53	1.0262	1	33256			59174	7025	39528	39544	67125	67125					-0.05806421535044137
TRERHYLN	8	Unmodified	_TRERHYLN_					0	0	0			REV__nc|ENSG00000166750|Q08AF3-2|SLFN5	REV__nc|ENSG00000166750|Q08AF3-2|SLFN5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.781005859375	2	544.783422	1087.55229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.359	1	72.318	71.818	72.818	-0.04039								0	0	0	0.29452	1	7065	7065		33.516	0.70317	1		+		59175	21315	39529	39545	67126	67126					0.0120160876351747
TRFKAKIGFI	10	Unmodified	_TRFKAKIGFI_					0	0	0			REV__ENST00000502622.1_1_11:113851793-113853927:+|nuORF	REV__ENST00000502622.1_1_11:113851793-113853927:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8665771484375	2	590.863683	1179.71281	1.3812	0.0008161	3.8747	0.0022894	5.2559	0.0031055	590.8662594003499	103.04	3.32	103.26	103.02	106.34	0.22556					209	89	4	0	0	0	0.86763	1	12655	12655		26.693	4.733	1	6168400	+		59176	27826	39530	39546	67127	67127					0.13014563427714165
TRFLTLTG	8	Unmodified	_TRFLTLTG_					0	0	0			REV__ENST00000440180.5_1_2:201994820-201997759:+|nuORF	REV__ENST00000440180.5_1_2:201994820-201997759:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.7635192871094	2	454.763635	907.512717	-0.87729	-0.00039896	0.10816	4.9188E-05	-0.76913	-0.00034977	454.76364990871195	47.486	0.78397	48.409	48.12	48.904	0.92315					52	19	4	0	0	0	0.93786	1	4568	4568		53.351	3.3269	1	6225300	+		59177	26738	39531	39547	67128	67128					0.05526088760075254
TRFTLTGL	8	Unmodified	_TRFTLTGL_					0	0	0		ENSG00000142949|ENST00000359947|PTPRF;nc|ENSG00000142949|P10586-2|PTPRF	ENSG00000142949|ENST00000359947|PTPRF	ENSG00000142949|ENST00000359947|PTPRF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.7635192871094	2	454.763635	907.512717	-1.6468	-0.00074888	0.88455	0.00040226	-0.76221	-0.00034662	454.7640048592381	47.693	0.81293	48.163	47.855	48.668	0.46941					53	20	4	0	0	0	0.87259	1	4542	4542		58.782	5.4305	1	5728200			59178	4591	39532	39548	67129	67129					0.055260887600866226
TRGNQKIL	8	Unmodified	_TRGNQKIL_					0	0	0		ENST00000468749.1_1_10:112262519-112263241:+|nuORF	ENST00000468749.1_1_10:112262519-112263241:+|nuORF	ENST00000468749.1_1_10:112262519-112263241:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.280029296875	2	465.279983	928.545414	-0.11899	-5.5362E-05	0.19844	9.2329E-05	0.079452	3.6968E-05	465.2799248826243	89.079	2.3276	89.147	88.595	90.922	0.068161					120	54	4	0	0	0	0.86677	1	9126	9126		27.882	2.4321	1	1620100			59179	12184	39533	39549	67130	67130					0.07828295882939074
TRGPVRTGT	9	Unmodified	_TRGPVRTGT_					0	0	0		ENST00000532779.5_2_8:110631229-110703831:-|nuORF	ENST00000532779.5_2_8:110631229-110703831:-|nuORF	ENST00000532779.5_2_8:110631229-110703831:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.7662658691406	2	472.76724	943.519927	-1.4813	-0.00070033	1.1453	0.00054148	-0.33599	-0.00015885	472.76778971214105	81.58	2.2284	81.694	80.507	82.735	0.11426					112	53	4	0	0	0	0.78124	1	7714	7714		30.318	4.7437	1	160160			59180	13384	39534	39550	67131	67131					0.04590821360534392
TRGVKIRS	8	Unmodified	_TRGVKIRS_					0	0	0			REV__ENST00000361671.9_1_9:88557190-88571299:+|nuORF	REV__ENST00000361671.9_1_9:88557190-88571299:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7876892089844	2	458.787976	915.561398	-1.1207	-0.00051419	0.067786	3.1099E-05	-1.053	-0.00048309	458.7879776925229	92.908	3.5156	93.134	92.238	95.754	0.22548					221	84	5	0	0	0	0.84341	1	9474	9474		24.203	0	1	15931000	+		59181	25509	39535	39551	67132	67132					0.10024002119848774
TRHQRKNKSKA	11	Unmodified	_TRHQRKNKSKA_					0	0	0		ENSG00000277149|ENST00000620995|TYW1B;ENSG00000198874|ENST00000359626|TYW1;nc|ENSG00000277149|Q6NUM6-2|TYW1B	ENSG00000277149|ENST00000620995|TYW1B	ENSG00000277149|ENST00000620995|TYW1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.93280029296875	3	451.932248	1352.77491	-0.13819	-6.2454E-05	1.0259	0.00046362	0.88768	0.00040117	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.75457	1	10836	10836		21.032	3.8655	1	924270			59182	8354	39536	39552	67133	67133					0.11263682828735
TRHTKAAF	8	Unmodified	_TRHTKAAF_					0	0	0		ENST00000543067.5_1_X:21392559-21392961:+|nuORF	ENST00000543067.5_1_X:21392559-21392961:+|nuORF	ENST00000543067.5_1_X:21392559-21392961:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7383117675781	2	466.259051	930.503549	-0.45576	-0.0002125	-2.6323	-0.0012273	-3.0881	-0.0014399	466.2578412879769	52.99	0.82795	53.604	52.991	53.819	0.61436					22	19	2	0	0	0	0.4196	1	5361	5361		19.36	0	1	310510			59183	13547	39537	39553	67134	67134					0.035517401944161975
TRIARWMHQKA	11	Unmodified	_TRIARWMHQKA_					0	0	0			REV__ENSG00000154265|ENST00000392676|ABCA5	REV__ENSG00000154265|ENST00000392676|ABCA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.5890808105469	3	466.590945	1396.75101	-1.2904	-0.00060211	-2.2606	-0.0010548	-3.551	-0.0016569	466.58979194970493	58.349	0.76842	58.383	58.073	58.841	0.033905					65	25	4	0	0	0	0.74405	1	5356	5356		23.378	0.81632	1	414830	+		59184	20379	39538	39554	67135	67135					0.06850126070730767
TRIASLNIN	9	Unmodified	_TRIASLNIN_					0	0	0			REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I	REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2903747558594	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.75725	1	9330	9330		36.447	0.82846	1	9883700	+		59185	17176	39539	39555	67136	67136					0.06628261191781348
TRIDDYNDVD	10	Unmodified	_TRIDDYNDVD_					0	0	0			REV__ENSG00000143924|ENST00000318522|EML4	REV__ENSG00000143924|ENST00000318522|EML4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.87939453125	2	613.270207	1224.52586	0.29777	0.00018262	-0.71094	-0.000436	-0.41317	-0.00025338	613.2693267833411	104.45	0.16161	104.49	104.43	104.59	0.039856					5	3	2	0	0	0	0.37624	1	11375	11375		47.657	5.2612	1	55849	+		59186	19856	39540	39556	67137	67137					-0.07742169709172231
TRIFLAGWLG	10	Unmodified	_TRIFLAGWLG_					0	0	0			REV__nc|ENSG00000171365|P51795-1|CLCN5	REV__nc|ENSG00000171365|P51795-1|CLCN5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3298950195312	2	567.326934	1132.63931	1.8589	0.0010546	3.176	0.0018018	5.0349	0.0028564	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86589	1	10020	10020		29.15	2.4566	1	15439000	+		59187	21725	39541	39557	67138	67138					0.07830014985211164
TRIFLAGWLG	10	Unmodified	_TRIFLAGWLG_					0	0	0			REV__nc|ENSG00000171365|P51795-1|CLCN5	REV__nc|ENSG00000171365|P51795-1|CLCN5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3300170898438	2	567.326934	1132.63931	1.3743	0.0007797	3.9991	0.0022688	5.3735	0.0030485	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.86348	1	11137	11137		31.53	3.6476	1	6182600	+		59188	21725	39541	39557	67139	67139					0.07830014985211164
TRIIAGPK	8	Unmodified	_TRIIAGPK_					0	0	0			REV__ENST00000254976.6_3_20:10277586-10277652:+|nuORF	REV__ENST00000254976.6_3_20:10277586-10277652:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.23583984375	2	428.27417	854.533787	-0.97429	-0.00041727	-2.2415	-0.00095998	-3.2158	-0.0013772	428.2720000866719	63.363	0.11147	63.386	63.306	63.417	0.022984					7	5	2	0	0	0	0.4196	1	5547	5547		18.324	0	1	27373	+		59189	24314	39542	39558	67140	67140					0.10070098859614518
TRIILFYSLSI	11	Unmodified	_TRIILFYSLSI_					0	0	0			REV__ENSG00000167332|ENST00000396950|OR51E2	REV__ENSG00000167332|ENST00000396950|OR51E2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.60101318359375	3	442.599101	1324.77547	2.7378	0.0012118	1.7705	0.00078361	4.5083	0.0019954	442.5997945412009	103.8	1.4388	103.76	103.37	104.81	-0.043755					90	34	4	0	0	0	0.72892	1	11436	11436		26.75	4.9693	1	569000	+		59190	21378	39543	39559	67141	67141					0.12607664705228672
TRIKCFIVAL	10	Unmodified	_TRIKCFIVAL_					0	0	0			REV__ENST00000550937.5_1_12:69924683-69951618:+|nuORF	REV__ENST00000550937.5_1_12:69924683-69951618:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.353515625	2	582.352094	1162.68964	0.15817	9.2113E-05	2.1842	0.001272	2.3424	0.0013641	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.86218	1	11292	11292		32.812	4.9302	1	78004000	+		59191	28601	39544	39560	67142	67142					0.11479801318728278
TRILEVFLLG	10	Unmodified	_TRILEVFLLG_					0	0	0		nc|ENSG00000144029|P82675-2|MRPS5	nc|ENSG00000144029|P82675-2|MRPS5	nc|ENSG00000144029|P82675-2|MRPS5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8591918945312	2	580.855524	1159.69649	-1.8735	-0.0010882	4.4592	0.0025902	2.5858	0.001502	580.8581610437462	62.709	0.65023	63.096	62.881	63.532	0.38779					38	14	4	0	0	0	0.54701	1	6725	6725		52.937	5.2794	1	1064900			59192	14973	39545	39561	67143	67143					0.12303437470950485
TRILEVFLLG	10	Unmodified	_TRILEVFLLG_					0	0	0		nc|ENSG00000144029|P82675-2|MRPS5	nc|ENSG00000144029|P82675-2|MRPS5	nc|ENSG00000144029|P82675-2|MRPS5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.861572265625	2	580.855524	1159.69649	-0.55011	-0.00031953	3.3832	0.0019651	2.8331	0.0016456	580.8574540257367	62.59	0.51871	63.144	62.993	63.512	0.55449					20	11	2	0	0	0	0.42393	1	6718	6718		62.107	7.3311	1	1055600			59193	14973	39545	39561	67144	67144					0.12303437470950485
TRILSLSNI	9	Unmodified	_TRILSLSNI_					0	0	0			REV__nc|ENSG00000155744|Q8IXS8|HYCC2	REV__nc|ENSG00000155744|Q8IXS8|HYCC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.8075256347656	2	508.808574	1015.60259	0.65318	0.00033234	-2.4261	-0.0012344	-1.7729	-0.00090206	508.80731297639136	83.188	1.9706	83.335	82.631	84.602	0.14695					106	45	4	0	0	0	0.7932	1	8080	8080		24.519	0	1	3797600	+		59194	20442	39546	39562	67145	67145					0.09541718368643615
TRINVKLLRP	10	Unmodified	_TRINVKLLRP_					0	0	0			REV__ENSG00000183035|ENST00000329312|CYLC1	REV__ENSG00000183035|ENST00000329312|CYLC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.929931640625	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.8486	1	3860	3860		17.833	7.2463	1	2636600	+		59195	22571	39547	39563	67146	67146					0.17569039722025082
TRIRLLDS	8	Unmodified	_TRIRLLDS_					0	0	0		ENSG00000152104|ENST00000366956|PTPN14	ENSG00000152104|ENST00000366956|PTPN14	ENSG00000152104|ENST00000366956|PTPN14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.2935485839844	2	487.293091	972.571629	-0.085832	-4.1825E-05	0.30463	0.00014844	0.2188	0.00010662	487.29311557745604	91.223	2.7335	91.293	90.723	93.457	0.069328					138	65	3	0	0	0	0.86677	1	9383	9383		27.882	0	1	2116800			59196	5155	39548	39564	67147	67147					0.08424565054417599
TRIRLLDS	8	Unmodified	_TRIRLLDS_					0	0	0		ENSG00000152104|ENST00000366956|PTPN14	ENSG00000152104|ENST00000366956|PTPN14	ENSG00000152104|ENST00000366956|PTPN14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.292724609375	2	487.293091	972.571629	-0.95023	-0.00046304	1.0703	0.00052155	0.12007	5.8511E-05	487.2934854308046	90.996	2.8908	91.042	90.474	93.365	0.046448					155	69	4	0	0	0	0.90523	1	9439	9439		40.778	7.9657	1	2321800			59197	5155	39548	39564	67148	67148					0.08424565054417599
TRIRLLDS	8	Unmodified	_TRIRLLDS_					0	0	0		ENSG00000152104|ENST00000366956|PTPN14	ENSG00000152104|ENST00000366956|PTPN14	ENSG00000152104|ENST00000366956|PTPN14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.2928466796875	2	487.293091	972.571629	0.70329	0.00034271	-0.54514	-0.00026564	0.15815	7.7066E-05	487.2927254358079	90.914	2.8458	91.068	90.679	93.525	0.15388					125	68	3	0	0	0	0.89043	1	9152	9152		35.618	0	1	1558400			59198	5155	39548	39564	67149	67149					0.08424565054417599
TRIRLLDS	8	Unmodified	_TRIRLLDS_					0	0	0		ENSG00000152104|ENST00000366956|PTPN14	ENSG00000152104|ENST00000366956|PTPN14	ENSG00000152104|ENST00000366956|PTPN14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.2929992675781	2	487.293091	972.571629	-1.6564	-0.00080713	1.8268	0.00089018	0.17042	8.3045E-05	487.29386636791077	90.875	2.2933	91.055	90.557	92.85	0.18029					120	54	3	0	0	0	0.86677	1	9101	9101		27.882	2.4321	1	1353600			59199	5155	39548	39564	67150	67150					0.08424565054417599
TRITQYKN	8	Unmodified	_TRITQYKN_					0	0	0		nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;ENSG00000117600|ENST00000370185|PLPPR4;nc|ENSG00000117600|Q7Z2D5|PLPPR4	nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.2821044921875	2	512.282723	1022.55089	-0.052062	-2.6671E-05	-2.6058	-0.0013349	-2.6579	-0.0013616	512.2812910993212	86.454	3.487	86.521	85.51	88.997	0.067436					149	81	2	0	0	0	0.87922	1	8802	8802		31.955	0	1	329990			59200	2989	39549	39565	67151	67151					0.040519746747463614
TRITQYKN	8	Unmodified	_TRITQYKN_					0	0	0		nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;ENSG00000117600|ENST00000370185|PLPPR4;nc|ENSG00000117600|Q7Z2D5|PLPPR4	nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.2830200195312	2	512.282723	1022.55089	0.68771	0.0003523	-3.3979	-0.0017407	-2.7102	-0.0013884	512.280910573943	86.397	3.3825	86.546	85.297	88.68	0.14902					148	79	2	0	0	0	0.91472	1	8465	8465		44.117	7.67	1	371240			59201	2989	39549	39565	67152	67152					0.040519746747463614
TRIVSKSQL	9	Unmodified	_TRIVSKSQL_					0	0	0		nc|ENSG00000120334|Q8N0S6-2|CENPL	nc|ENSG00000120334|Q8N0S6-2|CENPL	nc|ENSG00000120334|Q8N0S6-2|CENPL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3131713867188	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.78983	1	12729	12729		27.882	0	1	4038100			59202	14875	39550	39566	67153	67153					0.0994112074295117
TRKCIVPAFV	10	Unmodified	_TRKCIVPAFV_					0	0	0			REV__ENSG00000168056|ENST00000301873|LTBP3	REV__ENSG00000168056|ENST00000301873|LTBP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3306884765625	2	567.328619	1132.64269	0.27026	0.00015333	2.1429	0.0012157	2.4131	0.001369	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.86763	1	11314	11314		26.693	2.1737	1	6007000	+		59203	21455	39551	39567	67154	67154					0.08166941767558455
TRKFGARA	8	Unmodified	_TRKFGARA_					0	0	0			REV__nc|ENSG00000235865|Q9NRJ2|GSN-AS1	REV__nc|ENSG00000235865|Q9NRJ2|GSN-AS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.7651062011719	2	453.767043	905.519533	-1.1321	-0.0005137	-1.5592	-0.00070753	-2.6913	-0.0012212	453.76616777983287	42.672	2.6946	42.633	41.368	44.062	-0.038223					96	64	2	0	0	0	0.80706	1	3274	3274		19.36	0	1	295630	+		59204	30224	39552	39568	67155	67155					0.06299446431319211
TRKIAKLLKPQ	11	Unmodified	_TRKIAKLLKPQ_					0	0	0		ENSG00000162444|ENST00000294435|RBP7;ENST00000315901.4_1_1:10057339-10075887:+|nuORF	ENSG00000162444|ENST00000294435|RBP7	ENSG00000162444|ENST00000294435|RBP7	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	433.2555236816406	3	432.62224	1294.84489	-0.96206	-0.00041621	-3.3195	-0.0014361	-4.2815	-0.0018523	432.62147762032123	107.59	0.36929	107.59	107.28	107.65	0					13	8	3	0	0	0	0.17245	1	11161	11161		11.455	0	1	67493			59205	5692	39553	39569	67156	67156					0.2092616844463464
TRKIAKLLKPQ	11	Unmodified	_TRKIAKLLKPQ_					0	0	0		ENSG00000162444|ENST00000294435|RBP7;ENST00000315901.4_1_1:10057339-10075887:+|nuORF	ENSG00000162444|ENST00000294435|RBP7	ENSG00000162444|ENST00000294435|RBP7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.2557373046875	3	432.62224	1294.84489	0.73458	0.0003178	4.3593	0.0018859	5.0939	0.0022037	432.6237227788403	107.08	0.26853	107.17	106.99	107.26	0.091255					8	6	2	0	0	0	0.17779	1	11488	11488		11.932	0	1	72579			59206	5692	39553	39569	67157	67157					0.2092616844463464
TRKLAGPK	8	Unmodified	_TRKLAGPK_					0	0	0		nc|ENSG00000174527|Q8N1T3-3|MYO1H;nc|ENSG00000174527|Q8N1T3|MYO1H;ENSG00000174527|ENST00000310903|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	nc|ENSG00000174527|Q8N1T3-3|MYO1H	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.9140319824219	2	435.779619	869.544686	1.0708	0.00046663	-2.0858	-0.00090893	-1.015	-0.0004423	435.7787411319743	33.018	0.34326	33.017	32.826	33.17	-0.0016365					13	8	2	0	0	0	0.4196	1	1929	1929		6.3127	0	1	22130			59207	6943	39554	39570	67158	67158					0.10469501233887968
TRKLGLKICGF	11	Unmodified	_TRKLGLKICGF_					0	0	0		chr2:170817416-170818529|17|22.53|0.18|6.97|+|ENST00000455008|GAD1,GAD1;chr2:170817898-170818529|16|12.56|0.09|7.14|+|ENST00000456864|GAD1,GAD1;nc|ENSG00000128683|Q99259-3|GAD1;chr2:170817052-170818529|15|14.2|0.07|7.58|+|ENST00000375272|GAD1,GAD1;nc|ENSG00000128683|Q99259-4|GAD1;ENSG00000128683|ENST00000358196|GAD1	chr2:170817416-170818529|17|22.53|0.18|6.97|+|ENST00000455008|GAD1,GAD1	chr2:170817416-170818529|17|22.53|0.18|6.97|+|ENST00000455008|GAD1,GAD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.17608642578125	3	412.581276	1234.722	2.1294	0.00087854	0.17334	7.1516E-05	2.3027	0.00095006	412.58116805222505	95.114	0.47505	95.547	95.322	95.797	0.4324					22	11	3	0	0	0	0.17273	1	11344	11344		36.318	4.2835	1	98470			59208	315	39555	39571	67159	67159					0.11402588721693974
TRKRAPGG	8	Unmodified	_TRKRAPGG_					0	0	0		chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7508850097656	2	421.751393	841.488233	-0.10002	-4.2183E-05	0.32598	0.00013748	0.22596	9.5298E-05	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.86288	1	7631	7631		26.796	1.3459	1	579450			59209	496	39556	39572	67160	67160					0.061148733972345326
TRKRAPGG	8	Unmodified	_TRKRAPGG_					0	0	0		chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7513732910156	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.417	1	74.373	73.873	74.873	-0.043877								0	0	0	0.30316	1	7302	7302		42.474	3.453	1				59210	496	39556	39572	67161	67161					0.061148733972345326
TRKRAPGG	8	Unmodified	_TRKRAPGG_					0	0	0		chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.751708984375	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.85277	1	7603	7603		25.45	1.2474	1	532850			59211	496	39556	39572	67162	67162					0.061148733972345326
TRKRAPGG	8	Unmodified	_TRKRAPGG_					0	0	0		chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	chr7:16665501-16681301|19|10.63|0.1|6.72|+|2|BZW2,BZW2|1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.75140380859375	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.531	1	77.623	77.123	78.123	0.091438								0	0	0	0.29264	1	7248	7248		29.15	0	1				59212	496	39556	39572	67163	67163					0.061148733972345326
TRKREGVELK	10	Unmodified	_TRKREGVELK_					0	0	0			REV__ENST00000532108.1_1_11:4623360-4626734:-|nuORF	REV__ENST00000532108.1_1_11:4623360-4626734:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.91204833984375	3	405.910449	1214.70952	1.2294	0.00049903	2.7354	0.0011103	3.9648	0.0016093	405.9115005832532	37.578	1.9473	37.891	36.841	38.788	0.31312					140	48	5	0	0	0	0.32482	1	3015	3015		70.399	1.5524	1	6110800	+		59213	21379	39557	39573	67164	67164					0.11075268583044817
TRKTSRFVF	9	Unmodified	_TRKTSRFVF_					0	0	0		ENST00000547181.5_1_12:48482540-48495255:-|nuORF	ENST00000547181.5_1_12:48482540-48495255:-|nuORF	ENST00000547181.5_1_12:48482540-48495255:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	571.3311767578125	2	571.327465	1140.64038	2.9117	0.0016635	3.1782	0.0018158	6.0899	0.0034793	571.3292778918316	102.35	2.3075	102.31	101.49	103.8	-0.047005					131	55	4	0	0	0	0.78536	1	11189	11189		29.15	4.9468	1	2404800			59214	13599	39558	39574	67165	67165					0.07568229354114919
TRKYKILLRK	10	Unmodified	_TRKYKILLRK_					0	0	0			REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|24|1|sense	REV__L1PA7_dup5654|chr6:133614307-133620743:+|1.0132845187252737|0.0170583492729641|5.89|63.0|24|1|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.2919921875	3	440.294235	1317.86087	-1.6142	-0.00071074	-2.0665	-0.00090985	-3.6807	-0.0016206	440.2929975930263	58.275	1.2356	58.275	57.838	59.074	0					156	53	4	0	0	0	0.8492	2	5068	5050;5068		18.531	8.4272	1	193800	+		59215	29598	39559	39575	67166;67167	67167					0.21465874681530295
TRLAAPPL	8	Unmodified	_TRLAAPPL_					0	0	0			REV__nc|ENSG00000112531|Q96PU8-5|QKI	REV__nc|ENSG00000112531|Q96PU8-5|QKI	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.77471923828125	2	419.760895	837.507237	0.20758	8.7133E-05	4.0288	0.0016912	4.2364	0.0017783	419.7621811948225	42.684	0.48256	42.655	42.571	43.053	-0.029461					13	11	2	0	0	0	0.4196	1	3196	3196		19.36	0	1	108450	+		59216	17950	39560	39576	67168	67168					0.08198409968269971
TRLACSGSLGH	11	Unmodified	_TRLACSGSLGH_					0	0	0			REV__ENSG00000115596|ENST00000233948|WNT6	REV__ENSG00000115596|ENST00000233948|WNT6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.7767333984375	2	551.277115	1100.53968	0.32503	0.00017918	-3.4316	-0.0018918	-3.1066	-0.0017126	551.2751109394707	27.083	1.2037	27.045	26.676	27.88	-0.038523					78	29	4	0	0	0	0.68532	1	1328	1328		33.922	4.7721	1	656180	+		59217	18133	39561	39577	67169	67169					-0.0065717069101083325
TRLAITSRG	9	Unmodified	_TRLAITSRG_					0	0	0			REV__ENST00000228928.11_1_12:113400628-113400673:+|nuORF	REV__ENST00000228928.11_1_12:113400628-113400673:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7911071777344	2	487.790715	973.566878	-0.085473	-4.1693E-05	-0.089202	-4.3512E-05	-0.17467	-8.5205E-05	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.7932	1	8701	8701		19.104	3.4617	1	1889700	+		59218	24188	39562	39578	67170	67170					0.0790368091164737
TRLEPVPIWD	10	Unmodified	_TRLEPVPIWD_					0	0	0			REV__ENST00000494880.5_1_1:185268818-185270317:-|nuORF	REV__ENST00000494880.5_1_1:185268818-185270317:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8790893554688	2	613.332413	1224.65027	0.91321	0.0005601	-1.026	-0.00062931	-0.11283	-6.9205E-05	613.8346117997577	104.38	0.19469	104.5	104.36	104.56	0.11684					5	4	2	0	0	0	0.37624	1	11068	11068		62.107	10.915	1	122880	+		59219	18211	39563	39579	67171	67171					0.04693372568840459
TRLGAPPLPP	10	Unmodified	_TRLGAPPLPP_					0	0	0			REV__ENST00000228606.8_1_12:58158304-58160873:-|nuORF	REV__ENST00000228606.8_1_12:58158304-58160873:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8036193847656	2	509.805834	1017.59712	-0.054506	-2.7787E-05	-4.0835	-0.0020818	-4.1381	-0.0021096	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.77314	1	8412	8412		40.778	0	1	828920	+		59220	24186	39564	39580	67172	67172					0.08902039576844345
TRLGPTKFV	9	Unmodified	_TRLGPTKFV_					0	0	0			REV__ENSG00000134690|ENST00000373055|CDCA8	REV__ENSG00000134690|ENST00000373055|CDCA8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8035888671875	2	509.805834	1017.59712	0.075306	3.8391E-05	-4.2119	-0.0021473	-4.1366	-0.0021089	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.76255	1	8437	8437		35.618	6.4687	1	958280	+		59221	19157	39565	39581	67173	67173					0.08902039576832976
TRLGSLRPAPI	11	Unmodified	_TRLGSLRPAPI_					0	0	0			REV__ENST00000444294.7_1_1:231298177-231298498:+|nuORF	REV__ENST00000444294.7_1_1:231298177-231298498:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8668823242188	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.60058	1	11469	11469		44.377	0	1	52150000	+		59222	26786	39566	39582	67174	67174					0.12612473933995716
TRLGWGRR	8	Unmodified	_TRLGWGRR_					0	0	0			REV__nc|ENSG00000147548|Q9BZ95-4|NSD3	REV__nc|ENSG00000147548|Q9BZ95-4|NSD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904968261719	2	501.291217	1000.56788	-0.064759	-3.2463E-05	-1.4472	-0.00072545	-1.5119	-0.00075792	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.87922	1	8931	8931		31.955	0.42505	1	9565500	+		59223	20075	39567	39583	67175	67175					0.06761940071226036
TRLHIEPKR	9	Unmodified	_TRLHIEPKR_					0	0	0			REV__ENSG00000163521|ENST00000295759|GLB1L	REV__ENSG00000163521|ENST00000295759|GLB1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.3461303710938	2	575.346189	1148.67783	0.61456	0.00035358	-1.5799	-0.00090899	-0.96535	-0.00055541	575.3451796941858	98.405	2.0882	98.633	98.17	100.26	0.22787					146	48	5	0	0	0	0.76255	2	10165	10165;10222		35.618	4.0885	1	2884500	+		59224	20928	39568	39584	67176;67177	67176					0.10943320619730912
TRLHRRNGK	9	Unmodified	_TRLHRRNGK_					0	0	0		ENST00000478388.1_1_6:31999390-31999952:+|nuORF	ENST00000478388.1_1_6:31999390-31999952:+|nuORF	ENST00000478388.1_1_6:31999390-31999952:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.34130859375	2	569.33923	1136.66391	0.96241	0.00054794	1.3452	0.00076589	2.3076	0.0013138	569.3399024217997	22.41	0.60374	21.8	21.516	22.12	-0.6107					26	14	3	0	0	0	0.78536	1	913	913		29.15	6.1071	1	276750			59225	12388	39569	39585	67178	67178					0.10104087911304305
TRLHSIEFV	9	Unmodified	_TRLHSIEFV_					0	0	0			REV__ENSG00000187775|ENST00000389840|DNAH17;REV__ENST00000586052.5_1_17:76475094-76487566:-|nuORF	REV__ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.3060302734375	2	551.306198	1100.59784	-0.64986	-0.00035827	0.44132	0.0002433	-0.20854	-0.00011497	551.3062723835128	64.068	0.78235	64.067	63.719	64.502	-0.00078583					57	26	3	0	0	0	0.47272	1	5970	5970		53.351	3.9099	1	381510	+		59226	22946;29097	39570	39586	67179	67179					0.051568342258860866
TRLIPVQNLKN	11	Unmodified	_TRLIPVQNLKN_					0	0	0			REV__ENST00000508157.3_1_5:70790975-70807035:+|nuORF;REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3963623046875	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.72106	1	12318	12318		28.081	1.0342	1	2297700	+		59227	19963;27917	39571	39587	67180	67180					0.13652414651232903
TRLKAFAKLPP	11	Unmodified	_TRLKAFAKLPP_					0	0	0		ENST00000496241.6_1_6:4116110-4130478:-|nuORF;ENST00000464057.5_1_6:4116110-4125894:-|nuORF;ENST00000380120.6_1_6:4116110-4130812:-|nuORF;nc|ENSG00000198721|O75521-2|ECI2;ENSG00000198721|ENST00000380118|ECI2	ENST00000496241.6_1_6:4116110-4130478:-|nuORF	ENST00000496241.6_1_6:4116110-4130478:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3927001953125	2	621.390065	1240.76558	-0.078753	-4.8936E-05	4.3785	0.0027208	4.2997	0.0026718	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.69995	1	10869	10869		31.53	3.4483	1	10411000			59228	8314	39572	39588	67181	67181					0.15482521490503132
TRLKAFAKLPP	11	Unmodified	_TRLKAFAKLPP_					0	0	0		ENST00000496241.6_1_6:4116110-4130478:-|nuORF;ENST00000464057.5_1_6:4116110-4125894:-|nuORF;ENST00000380120.6_1_6:4116110-4130812:-|nuORF;nc|ENSG00000198721|O75521-2|ECI2;ENSG00000198721|ENST00000380118|ECI2	ENST00000496241.6_1_6:4116110-4130478:-|nuORF	ENST00000496241.6_1_6:4116110-4130478:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3928833007812	2	621.390065	1240.76558	0.69841	0.00043398	3.6119	0.0022444	4.3103	0.0026784	621.3922056168815	104.57	2.6797	104.61	104.09	106.77	0.039856					250	63	5	0	0	0	0.69995	1	11341	11341		31.53	5.9558	1	13976000			59229	8314	39572	39588	67182	67182					0.15482521490503132
TRLKAFAKLPP	11	Unmodified	_TRLKAFAKLPP_					0	0	0		ENST00000496241.6_1_6:4116110-4130478:-|nuORF;ENST00000464057.5_1_6:4116110-4125894:-|nuORF;ENST00000380120.6_1_6:4116110-4130812:-|nuORF;nc|ENSG00000198721|O75521-2|ECI2;ENSG00000198721|ENST00000380118|ECI2	ENST00000496241.6_1_6:4116110-4130478:-|nuORF	ENST00000496241.6_1_6:4116110-4130478:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.3919677734375	2	621.390065	1240.76558	4.2384	0.0026337	0.33874	0.00021049	4.5771	0.0028442	621.3901654110842	104.31	1.8962	104.53	104.05	105.95	0.2268					124	45	4	0	0	0	0.67778	1	12746	12746		35.152	2.3396	1	1273000			59230	8314	39572	39588	67183	67183					0.15482521490503132
TRLKKTKL	8	Unmodified	_TRLKKTKL_					0	0	0			REV__ENSG00000144962|ENST00000351008|SPATA16	REV__ENSG00000144962|ENST00000351008|SPATA16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3006591796875	2	494.337301	986.66005	0.76683	0.00037907	1.2337	0.00060988	2.0006	0.00098895	494.33829555481356	97.313	0.37391	97.477	97.382	97.755	0.16316					13	8	3	0	0	0	0.4196	1	10057	10057		11.511	0	1	75973	+		59231	19920	39573	39589	67184	67184					0.16618605364874384
TRLKSATH	8	Unmodified	_TRLKSATH_					0	0	0		nc|ENSG00000122507|Q3SYG4-3|BBS9;nc|ENSG00000122507|Q3SYG4-2|BBS9;nc|ENSG00000122507|Q3SYG4-4|BBS9;nc|ENSG00000122507|Q3SYG4-7|BBS9;ENSG00000122507|ENST00000242067|BBS9	nc|ENSG00000122507|Q3SYG4-3|BBS9	nc|ENSG00000122507|Q3SYG4-3|BBS9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2635498046875	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.86677	1	7902	7902		27.882	0	1	2957200			59232	14880	39574	39590	67185	67185					0.054357228488470355
TRLLIAEFV	9	Unmodified	_TRLLIAEFV_					0	0	0			REV__ENSG00000142207|ENST00000382751|URB1	REV__ENSG00000142207|ENST00000382751|URB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.3186645507812	2	531.321317	1060.62808	-1.5129	-0.00080386	-2.153	-0.0011439	-3.6659	-0.0019478	531.3198552399973	94.964	2.533	95.167	94.65	97.183	0.20242					171	59	5	0	0	0	0.71772	2	9726	9640;9726		39.253	10.103	1	2353400	+		59233	19730	39575	39591	67186;67187	67187					0.1001919289108173
TRLLVEAF	8	Unmodified	_TRLLVEAF_					0	0	0			REV__ENSG00000151779|ENST00000281513|NBAS;REV__nc|ENSG00000151779|A2RRP1-2|NBAS	REV__nc|ENSG00000151779|A2RRP1-2|NBAS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.2236633300781	2	474.779285	947.544017	0.78208	0.00037132	-1.0764	-0.00051105	-0.29431	-0.00013973	474.7786941346036	27.143	0.65188	26.803	26.458	27.11	-0.34035					24	14	2	0	0	0	0.4196	1	1515	1515		18.324	0	1	191660	+		59234	20268;29931	39576	39592	67188	67188					0.06814661794180665
TRLLVLSYK	9	Unmodified	_TRLLVLSYK_					0	0	0		ENST00000527406.1_1_11:9779925-9802076:+|nuORF	ENST00000527406.1_1_11:9779925-9802076:+|nuORF	ENST00000527406.1_1_11:9779925-9802076:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8402099609375	2	546.842416	1091.67028	-0.49529	-0.00027085	-3.9856	-0.0021795	-4.4809	-0.0024504	546.8402497724348	101.28	3.7061	101.28	100.69	104.39	0					228	91	5	0	0	0	0.64555	2	10251	10251;10381		44.377	1.3601	1	22090000			59235	13286	39577	39593	67189;67190	67189					0.12811168299458586
TRLLVLSYK	9	Unmodified	_TRLLVLSYK_					0	0	0		ENST00000527406.1_1_11:9779925-9802076:+|nuORF	ENST00000527406.1_1_11:9779925-9802076:+|nuORF	ENST00000527406.1_1_11:9779925-9802076:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8400268554688	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.33718	4	10525	10525;10592;10696;10763		62.107	10.772	1	44929000			59236	13286	39577	39593	67191;67192;67193;67194	67191					0.12811168299458586
TRLLVSVS	8	Unmodified	_TRLLVSVS_					0	0	0		nc|ENSG00000134343|Q9BYT9-2|ANO3;chr11:26474128-26508104|38|18.05|0.54|5.06|+|ENST00000531568|ANO3,ANO3;ENSG00000134343|ENST00000256737|ANO3;chr11:26309719-26441918|23|10.48|0.36|4.88|+|ENST00000672621|ANO3,ANO3;chr11:26189330-26309645|15|12.0|0.4|4.92|+|ENST00000672621|ANO3,ANO3	nc|ENSG00000134343|Q9BYT9-2|ANO3	nc|ENSG00000134343|Q9BYT9-2|ANO3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7703552246094	2	437.77146	873.528367	-1.1766	-0.00051507	-0.34958	-0.00015304	-1.5261	-0.0006681	437.77143489998485	40.358	2.279	40.947	39.956	42.235	0.58915					112	60	4	0	0	0	0.8347	1	3352	3352		23.042	6.5693	1	5900400			59237	99	39578	39594	67195	67195					0.0865437527713766
TRLLYSKPPF	10	Unmodified	_TRLLYSKPPF_					0	0	0			REV__ENSG00000147234|ENST00000683843|FRMPD3	REV__ENSG00000147234|ENST00000683843|FRMPD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.354736328125	2	611.353148	1220.69174	2.4219	0.0014807	2.8207	0.0017244	5.2426	0.0032051	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.86348	1	10194	10194		31.53	2.3598	1	12656000	+		59238	20061	39579	39595	67196	67196					0.09022553328168215
TRLNPKPKLN	10	Unmodified	_TRLNPKPKLN_					0	0	0			REV__nc|ENSG00000082438|Q53SF7-2|COBLL1	REV__nc|ENSG00000082438|Q53SF7-2|COBLL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.866455078125	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.67571	1	11408	11408		45.972	1.5951	1	52150000	+		59239	29716	39580	39596	67197	67197					0.12612473933995716
TRLPKDQLM	9	Unmodified	_TRLPKDQLM_					0	0	0			REV__nc|ENSG00000110104|Q9H6F5-2|CCDC86	REV__nc|ENSG00000110104|Q9H6F5-2|CCDC86	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.3051147460938	2	551.307884	1100.60121	-0.34137	-0.0001882	-2.7543	-0.0015185	-3.0957	-0.0017067	551.3061719414285	63.787	0.76929	63.814	63.476	64.246	0.027142					59	24	4	0	0	0	0.64555	1	5999	5999		44.377	7.9304	1	504530	+		59240	17797	39581	39597	67198	67198					0.054937610082333777
TRLPRLWPLMA	11	Unmodified	_TRLPRLWPLMA_					0	0	0		ENST00000587275.1_1_19:56173925-56175041:+|nuORF	ENST00000587275.1_1_19:56173925-56175041:+|nuORF	ENST00000587275.1_1_19:56173925-56175041:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9325866699219	3	451.932309	1352.7751	2.5866	0.001169	-1.7857	-0.00080703	0.80084	0.00036192	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.74405	1	10925	10925		23.378	1.5975	1	1152500			59241	14185	39582	39598	67199	67199					0.112819665043844
TRLQLQQRLL	10	Unmodified	_TRLQLQQRLL_					0	0	0		ENSG00000072840|ENST00000264956|EVC	ENSG00000072840|ENST00000264956|EVC	ENSG00000072840|ENST00000264956|EVC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.892578125	2	634.893503	1267.77245	-0.13084	-8.307E-05	-1.4622	-0.00092832	-1.593	-0.0010114	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.64457	1	11505	11505		47.657	3.2801	1	40768000			59242	1284	39583	39599	67200	67200					0.14927834371087556
TRLQLQQRLL	10	Unmodified	_TRLQLQQRLL_					0	0	0		ENSG00000072840|ENST00000264956|EVC	ENSG00000072840|ENST00000264956|EVC	ENSG00000072840|ENST00000264956|EVC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8927001953125	2	634.893503	1267.77245	1.3476	0.00085558	-2.8123	-0.0017855	-1.4647	-0.0009299	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.64457	2	11501	11501;11537		47.657	1.5253	1	42647000			59243	1284	39583	39599	67201;67202	67201					0.14927834371087556
TRLQLQQRLL	10	Unmodified	_TRLQLQQRLL_					0	0	0		ENSG00000072840|ENST00000264956|EVC	ENSG00000072840|ENST00000264956|EVC	ENSG00000072840|ENST00000264956|EVC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8927612304688	2	634.893503	1267.77245	0.93451	0.00059331	-2.8314	-0.0017976	-1.8969	-0.0012043	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.64457	1	11261	11261		47.657	1.2006	1	69492000			59244	1284	39583	39599	67203	67203					0.14927834371087556
TRLQLQQRLL	10	Unmodified	_TRLQLQQRLL_					0	0	0		ENSG00000072840|ENST00000264956|EVC	ENSG00000072840|ENST00000264956|EVC	ENSG00000072840|ENST00000264956|EVC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8926391601562	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.64457	2	11127	11127;11223		47.657	2.9666	1	66671000			59245	1284	39583	39599	67204;67205	67204					0.14927834371087556
TRLQQQKCV	9	Unmodified	_TRLQQQKCV_					0	0	0		nc|ENSG00000197771|Q9BTE3-3|MCMBP;ENSG00000197771|ENST00000369077|MCMBP;nc|ENSG00000197771|Q9BTE3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.3058471679688	2	552.303133	1102.59171	2.2801	0.0012593	3.7508	0.0020716	6.0309	0.0033309	552.3050884514464	92.528	2.9469	92.464	91.439	94.386	-0.06414					235	69	4	0	0	0	0.71772	1	9872	9872		39.253	6.4404	1	1797400			59246	8197	39584	39600	67206	67206					0.044519927227156586
TRLRGPPA	8	Unmodified	_TRLRGPPA_					0	0	0			REV__ENST00000553181.5_1_2:10588860-10589010:+|nuORF	REV__ENST00000553181.5_1_2:10588860-10589010:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801208496094	2	434.261594	866.508634	-0.66442	-0.00028853	-2.5121	-0.0010909	-3.1765	-0.0013794	434.2603821829756	38.587	0.32851	38.929	38.737	39.065	0.34187					11	7	2	0	0	0	0.4196	1	3169	3169		26.796	2.5934	1	131950	+		59247	28642	39585	39601	67207	67207					0.07004044057032388
TRLRHPRL	8	Unmodified	_TRLRHPRL_					0	0	0		chr12:100317692-100317803|35|24.23|0.91|4.74|+|ENST00000635101|SCYL2,SCYL2;ENSG00000136021|ENST00000360820|SCYL2;ENST00000549486.1_1_12:100685283-100685439:+|nuORF	chr12:100317692-100317803|35|24.23|0.91|4.74|+|ENST00000635101|SCYL2,SCYL2	chr12:100317692-100317803|35|24.23|0.91|4.74|+|ENST00000635101|SCYL2,SCYL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.826904296875	2	524.827966	1047.64138	-0.038995	-2.0466E-05	-2.0451	-0.0010733	-2.0841	-0.0010938	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.884	1	10558	10558		33.516	0	1	26414000			59248	110	39586	39602	67208	67208					0.1194648851369493
TRLSKLWTKAS	11	Unmodified	_TRLSKLWTKAS_					0	0	0			REV__ENST00000433118.5_1_2:130917171-130932539:-|nuORF	REV__ENST00000433118.5_1_2:130917171-130932539:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	645.8846435546875	2	645.880062	1289.74557	2.6479	0.0017102	2.8586	0.0018463	5.5065	0.0035565	645.8818448298974	105.88	1.6011	105.84	105.23	106.83	-0.03714					97	37	3	0	0	0	0.74002	1	11688	11688		15.333	0	1	1766900	+		59249	26646	39587	39603	67209	67209					0.11228725759883673
TRLSKLWTKAS	11	Unmodified	_TRLSKLWTKAS_					0	0	0			REV__ENST00000433118.5_1_2:130917171-130932539:-|nuORF	REV__ENST00000433118.5_1_2:130917171-130932539:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	645.8842163085938	2	645.880062	1289.74557	1.6037	0.0010358	3.8348	0.0024768	5.4385	0.0035126	645.8824480849914	105.51	1.1194	105.67	105	106.12	0.15924					80	28	3	0	0	0	0.73277	1	11295	11295		16.717	0	1	2558100	+		59250	26646	39587	39603	67210	67210					0.11228725759883673
TRLSKRKKLR	10	Unmodified	_TRLSKRKKLR_					0	0	0			REV__ENST00000446760.2_1:146412138-146412798:+|nuORF	REV__ENST00000446760.2_1:146412138-146412798:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.40576171875	2	643.430587	1284.84662	0.94273	0.00060658	2.1108	0.0013582	3.0535	0.0019647	643.4320223870275	106.74	0.39785	106.84	106.52	106.92	0.099007					10	8	2	0	0	0	0.37624	1	11441	11441		27.882	7.8855	1	47816	+		59251	26810	39588	39604	67211	67211					0.21559222253267762
TRLTCRLRPRR	11	Unmodified	_TRLTCRLRPRR_					0	0	0			REV__ENST00000481848.6_2_6:127836176-127837095:-|nuORF	REV__ENST00000481848.6_2_6:127836176-127837095:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.6241760253906	3	476.621127	1426.84155	2.8112	0.0013399	2.5746	0.0012271	5.3858	0.002567	476.62228980917894	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.79476	1	13181	13181		12.433	2.3289	1	2689700	+		59252	27451	39589	39605	67212	67212					0.14520595118960955
TRLTGLIKD	9	Unmodified	_TRLTGLIKD_					0	0	0			REV__ENSG00000138135|ENST00000371852|CH25H	REV__ENSG00000138135|ENST00000371852|CH25H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.8056640625	2	508.808574	1015.60259	1.6039	0.0008161	-3.3912	-0.0017255	-1.7873	-0.00090938	508.80675407438747	90.171	1.1085	90.101	89.611	90.719	-0.069977					56	25	3	0	0	0	0.78528	1	9422	9422		29.17	1.0886	1	1285500	+		59253	19443	39590	39606	67213	67213					0.09541718368654983
TRLTGLIKD	9	Unmodified	_TRLTGLIKD_					0	0	0			REV__ENSG00000138135|ENST00000371852|CH25H	REV__ENSG00000138135|ENST00000371852|CH25H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.805908203125	2	508.808574	1015.60259	-1.5863	-0.00080713	-0.23955	-0.00012189	-1.8259	-0.00092901	508.8083574581473	89.656	1.4168	89.832	89.259	90.675	0.1758					59	32	2	0	0	0	0.75725	2	8934	8884;8934		36.447	2.2742	1	1468400	+		59254	19443	39590	39606	67214;67215	67215					0.09541718368654983
TRLVLSRRFA	10	Unmodified	_TRLVLSRRFA_					0	0	0			REV__ENSG00000213988|ENST00000418063|ZNF90	REV__ENSG00000213988|ENST00000418063|ZNF90	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.5841369628906	3	406.919168	1217.73567	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.59	1	112.52	112.02	113.02	-0.063889								0	0	0	0.45132	1	12222	12222		18.531	2.5243	1		+		59255	23640	39591	39607	67216	67216					0.1355158254516482
TRLVPRGG	8	Unmodified	_TRLVPRGG_					0	0	0		ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2615661621094	2	428.261594	854.508634	-1.1356	-0.00048635	1.4339	0.00061408	0.29824	0.00012772	428.2621524287907	91.088	2.5476	91.088	90.477	93.025	0					222	59	5	0	0	0	0.85277	1	8845	8845		25.45	1.2474	1	33233000			59256	9154	39592	39608	67217	67217					0.07556044057048439
TRLVPRGG	8	Unmodified	_TRLVPRGG_					0	0	0		ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2615051269531	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.85277	1	9315	9315		25.45	0	1	52688000			59257	9154	39592	39608	67218	67218					0.07556044057048439
TRLVPRGG	8	Unmodified	_TRLVPRGG_					0	0	0		ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	428.26165771484375	2	428.261594	854.508634	1.4286	0.0006118	-1.267	-0.00054261	0.16155	6.9187E-05	428.26101824885353	90.915	2.5361	90.848	90.135	92.671	-0.067085					242	60	6	0	0	0	0.8347	4	9556	9520;9556;9580;9616		25.45	0	1	57042000			59258	9154	39592	39608	67219;67220;67221;67222	67220					0.07556044057048439
TRLVPRGG	8	Unmodified	_TRLVPRGG_					0	0	0		ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.26141357421875	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.85277	2	9377	9377;9509		25.45	0	1	55300000			59259	9154	39592	39608	67223;67224	67223					0.07556044057048439
TRLVPRGG	8	Unmodified	_TRLVPRGG_					0	0	0		ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.261474609375	2	428.261594	854.508634	-1.8497	-0.00079216	1.9562	0.00083775	0.10645	4.5588E-05	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.884	1	9045	9045		33.516	0	1	31323000			59260	9154	39592	39608	67225	67225					0.07556044057048439
TRLVRAGAP	9	Unmodified	_TRLVRAGAP_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.2716064453125	2	470.787976	939.561398	0.69782	0.00032852	-1.2306	-0.00057935	-0.53277	-0.00025082	470.7872229588136	92.352	0.93349	92.511	91.985	92.919	0.15875					26	21	2	0	0	0	0.20789	1	9286	9286		19.104	0	1	72261			59261	8074	39593	39609	67226	67226					0.08920002119850778
TRLVSVPSPVI	11	Unmodified	_TRLVSVPSPVI_					0	0	0			REV__ENST00000377658.8_1_1:6651099-6651537:-|nuORF	REV__ENST00000377658.8_1_1:6651099-6651537:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	584.3564453125	2	584.358431	1166.70231	-1.3402	-0.00078317	-2.8317	-0.0016547	-4.1719	-0.0024379	584.3568464329793	92.429	3.0691	92.615	91.162	94.231	0.18582					184	72	3	0	0	0	0.72106	1	9281	9281		28.081	2.5074	1	728420	+		59262	25870	39594	39610	67227	67227					0.1256253598260173
TRMVSIVVAVF	11	Unmodified	_TRMVSIVVAVF_					0	0	0		nc|ENSG00000180616|P30874-2|SSTR2;ENSG00000180616|ENST00000357585|SSTR2	nc|ENSG00000180616|P30874-2|SSTR2	nc|ENSG00000180616|P30874-2|SSTR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3547973632812	2	611.354834	1220.69511	2.1766	0.0013307	-0.33396	-0.00020417	1.8427	0.0011265	611.3544471313521	94.232	2.8102	94.173	92.251	95.061	-0.059212					248	66	4	0	0	0	0.61369	1	9995	9995		42.864	1.4377	1	5823000			59263	7336	39595	39611	67228	67228					0.09359480110538243
TRMVSIVVAVF	11	Unmodified	_TRMVSIVVAVF_					0	0	0		nc|ENSG00000180616|P30874-2|SSTR2;ENSG00000180616|ENST00000357585|SSTR2	nc|ENSG00000180616|P30874-2|SSTR2	nc|ENSG00000180616|P30874-2|SSTR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3547973632812	2	611.354834	1220.69511	1.1383	0.00069592	0.67847	0.00041479	1.8168	0.0011107	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.69995	1	9445	9445		31.53	3.4483	1	7316900			59264	7336	39595	39611	67229	67229					0.09359480110538243
TRMYTIVN	8	Unmodified	_TRMYTIVN_					0	0	0			REV__nc|ENSG00000172748|Q8TC21-3|ZNF596	REV__nc|ENSG00000172748|Q8TC21-3|ZNF596	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	499.2592468261719	2	499.260402	996.506251	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.285	1	23.234	22.734	23.734	-0.050077								0	0	0	0.29344	1	764	764		31.955	2.8053	1		+		59265	21853	39596	39612	67230	67230					0.00785827537060868
TRPDSPGHT	9	Unmodified	_TRPDSPGHT_					0	0	0			REV__nc|ENSG00000126217|O15068-2|MCF2L	REV__nc|ENSG00000126217|O15068-2|MCF2L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2329406738281	2	484.23323	966.451907	0.78986	0.00038248	-0.98339	-0.00047619	-0.19352	-9.371E-05	484.23263862664584	23.199	1.8288	22.781	22.016	23.845	-0.41879					84	42	4	0	0	0	0.51307	1	1019	1019		51.335	1.8939	1	1385900	+		59266	29826	39597	39613	67231	67231					-0.032660482901405885
TRPNGTDD	8	Unmodified	_TRPNGTDD_					0	0	0		ENSG00000270339|ENST00000584068|PPIAL4H	ENSG00000270339|ENST00000584068|PPIAL4H	ENSG00000270339|ENST00000584068|PPIAL4H	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.59063720703125	2	438.196313	874.378074	1.4926	0.00065404	-3.6871	-0.0016157	-2.1945	-0.00096162	438.1951527918988	30.685	0.19202	30.674	30.585	30.777	-0.010656					6	4	2	0	0	0	0.4196	1	1623	1623		10.866	0	1	4971.2			59267	8973	39598	39614	67232	67232					-0.06414016452481519
TRPRRCKGLL	10	Unmodified	_TRPRRCKGLL_					0	0	0			REV__nc|ENSG00000130675|P50219-2|MNX1	REV__nc|ENSG00000130675|P50219-2|MNX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.5801696777344	3	400.576636	1198.70808	5.5422	0.0022201	4.3022	0.0017234	9.8445	0.0039435	400.57823953214853	111.56	0.41818	111.59	111.28	111.7	0.033821					36	15	3	0	0	0	0.85086	1	13538	13538		19.263	2.0959	1	3141200	+		59268	18889	39599	39615	67233	67233					0.1166735601327673
TRPSGNIPIV	10	Unmodified	_TRPSGNIPIV_					0	0	0			REV__ENSG00000139687|ENST00000267163|RB1	REV__ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.30517578125	2	527.306198	1052.59784	-0.62415	-0.00032912	-2.1989	-0.0011595	-2.8231	-0.0014886	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.8651	1	10068	10068		25.574	1.0549	1	949980	+		59269	19561	39600	39616	67234	67234					0.07364834225904815
TRQDSPKPS	9	Unmodified	_TRQDSPKPS_					0	0	0		nc|ENSG00000127124|Q5T1R4-2|HIVEP3;ENSG00000127124|ENST00000372583|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	nc|ENSG00000127124|Q5T1R4-2|HIVEP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.7622985839844	2	508.261988	1014.50942	-0.13587	-6.9056E-05	-0.66751	-0.00033927	-0.80338	-0.00040833	508.26141588999826	29.388	0.48144	29.369	29.139	29.621	-0.019407					30	18	2	0	0	0	0.77696	1	1476	1476		31.53	1.2121	1	32352			59270	3484	39601	39617	67235	67235					0.0027479391542328813
TRQPVASALRL	11	Unmodified	_TRQPVASALRL_					0	0	0			REV__ENST00000223215.8_1_7:130131958-130132015:+|nuORF	REV__ENST00000223215.8_1_7:130131958-130132015:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.1877746582031	3	404.578811	1210.7146	0.84853	0.0003433	2.7652	0.0011187	3.6137	0.001462	404.57983418268657	33.446	1.639	33.658	32.55	34.189	0.21168					52	38	2	0	0	0	0.17521	1	2305	2305		28.577	15.619	1	156380	+		59271	24171	39602	39618	67236	67236					0.11767572445637597
TRQRPKIRPYL	11	Unmodified	_TRQRPKIRPYL_					0	0	0			REV__ENST00000555391.5_1_14:104201493-104210315:-|nuORF	REV__ENST00000555391.5_1_14:104201493-104210315:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.624267578125	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.79224	1	12954	12954		12.957	2.3707	1	2577100	+		59272	16946	39603	39619	67237	67237					0.1557490104507906
TRRALLILTVL	11	Unmodified	_TRRALLILTVL_					0	0	0		ENST00000495650.1_3_1:179834953-179846902:-|nuORF	ENST00000495650.1_3_1:179834953-179846902:-|nuORF	ENST00000495650.1_3_1:179834953-179846902:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	634.8927001953125	2	634.924272	1267.83399	-0.0078977	-5.0144E-06	0.92983	0.00059037	0.92193	0.00058535	634.9258630318669	106.23	0.52151	106.23	106.1	106.62	0					16	11	2	0	0	0	0.17502	1	11041	11041		36.447	10.873	1	63577			59273	12770	39604	39620	67238	67238					0.21078766070354504
TRRALSLSA	9	Unmodified	_TRRALSLSA_					0	0	0		ENSG00000099901|ENST00000430524|RANBP1	ENSG00000099901|ENST00000430524|RANBP1	ENSG00000099901|ENST00000430524|RANBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7910461425781	2	487.790715	973.566878	-1.3135	-0.00064074	1.1066	0.00053979	-0.20694	-0.00010094	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.76764	1	8745	8745		34.173	0	1	2239000			59274	1775	39605	39621	67239	67239					0.07903680911658739
TRRCCVMTV	9	Unmodified	_TRRCCVMTV_					0	0	0			REV__nc|ENSG00000107186|O75970-5|MPDZ	REV__nc|ENSG00000107186|O75970-5|MPDZ	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.8032836914062	2	534.759189	1067.50383	-0.44152	-0.00023611	3.2932	0.001761	2.8516	0.0015249	535.2624877705964	27.671	0.39202	27.574	27.36	27.752	-0.096947					9	8	2	0	0	0	0.20789	1	1622	1622		23.042	0	1	28977	+		59275	17649	39606	39622	67240	67240					-0.027226674638995974
TRRHQRRAGAS	11	Unmodified	_TRRHQRRAGAS_					0	0	0			REV__ENSG00000167625|ENST00000301215|ZNF526	REV__ENSG00000167625|ENST00000301215|ZNF526	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.5977478027344	3	432.576575	1294.7079	-0.16987	-7.3483E-05	0.20359	8.8066E-05	0.033713	1.4584E-05	432.5765513283734	106.48	0.51672	106.46	106.26	106.78	-0.025146					15	11	2	0	0	0	0.17396	1	11566	11566		32.034	12.771	1	72193	+		59276	21407	39607	39623	67241	67241					0.07233072337658086
TRRKQRLPV	9	Unmodified	_TRRKQRLPV_					0	0	0		ENST00000308086.2_1_12:72057485-72057791:+|nuORF	ENST00000308086.2_1_12:72057485-72057791:+|nuORF	ENST00000308086.2_1_12:72057485-72057791:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.3666381835938	2	577.367456	1152.72036	2.1382	0.0012346	-3.3124	-0.0019124	-1.1741	-0.0006779	577.3654203694961	102.01	1.0705	102.33	101.93	103.01	0.32511					73	24	4	0	0	0	0.7932	1	12397	12397		24.203	3.2558	1	1980600			59277	9882	39608	39624	67242	67242					0.15010715747962422
TRRLDIRAPL	10	Unmodified	_TRRLDIRAPL_					0	0	0		nc|ENSG00000162129|Q9H078-3|CLPB;ENSG00000162129|ENST00000538039|CLPB;nc|ENSG00000162129|Q9H078|CLPB;ENST00000538021.5_2_11:72004413-72018253:-|nuORF;nc|ENSG00000162129|Q9H078-5|CLPB;nc|ENSG00000162129|Q9H078-4|CLPB	nc|ENSG00000162129|Q9H078-3|CLPB	nc|ENSG00000162129|Q9H078-3|CLPB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.8728637695312	2	605.872571	1209.73059	-1.2702	-0.00076958	0.43018	0.00026063	-0.84002	-0.00050895	605.8726634233227	100.16	1.4911	100.34	99.884	101.38	0.17199					100	34	4	0	0	0	0.86047	1	10393	10393		23.523	0	1	739750			59278	5670	39609	39625	67243	67243					0.13411278682542616
TRRPGHKKI	9	Unmodified	_TRRPGHKKI_					0	0	0			REV__nc|ENSG00000144460|Q9P242|NYAP2	REV__nc|ENSG00000144460|Q9P242|NYAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8397827148438	2	546.841074	1091.66759	0.84844	0.00046396	-3.1925	-0.0017458	-2.3441	-0.0012818	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.78058	1	10626	10626		30.504	1.3541	1	43597000	+		59279	19892	39610	39626	67244	67244					0.12542757685173456
TRRPGHKKI	9	Unmodified	_TRRPGHKKI_					0	0	0			REV__nc|ENSG00000144460|Q9P242|NYAP2	REV__nc|ENSG00000144460|Q9P242|NYAP2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8409423828125	2	546.841074	1091.66759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.16	1	103.28	102.78	103.78	0.11494								0	0	0	0.28772	1	10832	10832		35.618	0	1		+		59280	19892	39610	39626	67245	67245					0.12542757685173456
TRRPGHKKI	9	Unmodified	_TRRPGHKKI_					0	0	0			REV__nc|ENSG00000144460|Q9P242|NYAP2	REV__nc|ENSG00000144460|Q9P242|NYAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8409423828125	2	546.841074	1091.66759	0.96702	0.0005288	-2.8806	-0.0015752	-1.9136	-0.0010464	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.78058	1	12144	12144		30.504	3.7075	1	9124000	+		59281	19892	39610	39626	67246	67246					0.12542757685173456
TRRPLLLPRL	10	Unmodified	_TRRPLLLPRL_					0	0	0		nc|ENSG00000100099|Q9NQG7-3|HPS4;ENSG00000100099|ENST00000398145|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4;ENST00000496385.5_1_22:26849136-26861668:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000429411.5_1_22:26849201-26866860:-|nuORF	nc|ENSG00000100099|Q9NQG7-3|HPS4	nc|ENSG00000100099|Q9NQG7-3|HPS4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7671203613281	3	412.275063	1233.80336	0.16801	6.9265E-05	-4.4507	-0.0018349	-4.2827	-0.0017656	412.27325100426077	37.906	0.94225	38.001	37.748	38.69	0.094322					51	32	2	0	0	0	0.37624	1	2177	2177		10.104	1.4102	1	116140			59282	1796	39611	39627	67247	67247					0.19581032475980464
TRRPWKKIL	9	Unmodified	_TRRPWKKIL_					0	0	0		ENSG00000100596|ENST00000216484|SPTLC2	ENSG00000100596|ENST00000216484|SPTLC2	ENSG00000100596|ENST00000216484|SPTLC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.3799438476562	2	599.382574	1196.7506	-0.54345	-0.00032574	-3.6476	-0.0021863	-4.1911	-0.0025121	599.3802252506414	103.57	3.0198	103.57	103.18	106.2	-0.0035782					175	72	5	0	0	0	0.78058	2	11147	11147;11255		30.504	3.3631	1	11998000			59283	1853	39612	39628	67248;67249	67248					0.16009074413159396
TRRPWKKIL	9	Unmodified	_TRRPWKKIL_					0	0	0		ENSG00000100596|ENST00000216484|SPTLC2	ENSG00000100596|ENST00000216484|SPTLC2	ENSG00000100596|ENST00000216484|SPTLC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.37890625	2	599.382574	1196.7506	-0.35766	-0.00021438	-3.7869	-0.0022698	-4.1446	-0.0024842	599.3801693786043	103.37	3.7428	103.41	103.03	106.77	0.041481					250	89	5	0	0	0	0.78058	1	11305	11305		30.504	0.18592	1	13277000			59284	1853	39612	39628	67250	67250					0.16009074413159396
TRRRRRPRRRR	11	Unmodified	_TRRRRRPRRRR_					0	0	0		ENSG00000185163|ENST00000397333|DDX51	ENSG00000185163|ENST00000397333|DDX51	ENSG00000185163|ENST00000397333|DDX51	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24847412109375	4	406.262528	1621.02101	0.62301	0.00025311	0.35646	0.00014482	0.97947	0.00039792	406.26268933208564	88.471	0.15869	88.622	88.563	88.721	0.15055					5	3	2	0	0	0	0.18408	1	8797	8797		0.3405	0	1	256990			59285	7685	39613	39629	67251	67251					0.23533660241764665
TRRRRRRRRGA	11	Unmodified	_TRRRRRRRRGA_					0	0	0			REV__ENST00000396212.6_1_16:19535261-19535342:+|nuORF	REV__ENST00000396212.6_1_16:19535261-19535342:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	499.64849853515625	3	499.649179	1495.92571	0.76945	0.00038446	0.27632	0.00013806	1.0458	0.00052252	499.6492643575954	16.078	0.24442	16.054	15.981	16.225	-0.024035					22	10	3	0	0	0	0.74771	1	106	106		22.562	10.129	1	118900	+		59286	26138	39614	39630	67252	67252					0.19758307050733492
TRRRRRRRRGA	11	Unmodified	_TRRRRRRRRGA_					0	0	0			REV__ENST00000396212.6_1_16:19535261-19535342:+|nuORF	REV__ENST00000396212.6_1_16:19535261-19535342:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	499.649179	1495.92571	0.76945	0.00038446	0.27632	0.00013806	1.0458	0.00052252	499.6492643575954	16.078	0.24442	16.054	15.981	16.225	-0.024035	-0.022356	-0.0013088	NaN	22.562	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118900	+		59287	26138	39614	39630							0.19758307050733492
TRRRRSRSWRI	11	Unmodified	_TRRRRSRSWRI_					0	0	0		ENST00000586866.5_2_19:1077961-1079783:+|nuORF	ENST00000586866.5_2_19:1077961-1079783:+|nuORF	ENST00000586866.5_2_19:1077961-1079783:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	510.63421630859375	3	510.638057	1528.89234	-0.66076	-0.00033741	-4.2242	-0.002157	-4.885	-0.0024945	510.63450150479764	105.06	2.1188	105.06	104.28	106.4	0					172	50	6	0	0	0	0.79945	1	10871	10871		11.455	2.2428	1	638450			59288	14179	39615	39631	67253	67253					0.1490526048821721
TRRRVGLKAP	10	Unmodified	_TRRRVGLKAP_					0	0	0		nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A;ENSG00000152234|ENST00000398752|ATP5F1A;ENST00000589611.1_1_18:43669530-43671830:-|nuORF	nc|ENSG00000152234|P25705-2|ATP5F1A	nc|ENSG00000152234|P25705-2|ATP5F1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	577.3661499023438	2	577.367456	1152.72036	0.87834	0.00050713	-2.6389	-0.0015236	-1.7606	-0.0010165	577.3658132315567	102.16	3.1638	102.3	101.85	105.01	0.13522					236	78	5	0	0	0	0.85694	1	10787	10787		21.96	1.4781	1	15036000			59289	5164	39616	39632	67254	67254					0.1501071574798516
TRRSPPTV	8	Unmodified	_TRRSPPTV_					0	0	0			REV__ENST00000462349.5_1_21:44473992-44479496:-|nuORF	REV__ENST00000462349.5_1_21:44473992-44479496:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26220703125	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.87479	1	7441	7441		30.504	0	1	1329900	+		59290	27049	39617	39633	67255	67255					0.05435722848858404
TRRVFIRRV	9	Unmodified	_TRRVFIRRV_					0	0	0			REV__ENST00000483992.5_1_2:27994849-27995155:+|nuORF	REV__ENST00000483992.5_1_2:27994849-27995155:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	601.8842163085938	2	601.883273	1201.75199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.29	1	111.33	110.83	111.83	0.041832								0	0	0	0.36247	1	13468	13468		10.866	1.1599	1		+		59291	27503	39618	39634	67256	67256					0.1591870850190844
TRRVKSGL	8	Unmodified	_TRRVKSGL_					0	0	0		nc|ENSG00000184465|A2RRH5-2|WDR27;nc|ENSG00000184465|A2RRH5|WDR27;ENSG00000184465|ENST00000448612|WDR27	nc|ENSG00000184465|A2RRH5-2|WDR27	nc|ENSG00000184465|A2RRH5-2|WDR27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	458.787109375	2	458.787976	915.561398	-0.12843	-5.8921E-05	-1.0836	-0.00049716	-1.2121	-0.00055608	458.7874632709064	93.167	2.7299	93.237	92.412	95.142	0.069862					206	64	5	0	0	0	0.90465	1	9676	9676		40.573	7.057	1	16426000			59292	7615	39619	39635	67257	67257					0.10024002119860143
TRRVKSGL	8	Unmodified	_TRRVKSGL_					0	0	0		nc|ENSG00000184465|A2RRH5-2|WDR27;nc|ENSG00000184465|A2RRH5|WDR27;ENSG00000184465|ENST00000448612|WDR27	nc|ENSG00000184465|A2RRH5-2|WDR27	nc|ENSG00000184465|A2RRH5-2|WDR27	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.787841796875	2	458.787976	915.561398	-1.7492	-0.00080251	0.76438	0.00035069	-0.98482	-0.00045182	458.7883137610394	92.976	2.4972	93.168	92.52	95.017	0.19239					169	59	5	0	0	0	0.87922	1	9474	9474		31.955	1.4512	1	11606000			59293	7615	39619	39635	67258	67258					0.10024002119860143
TRRVVPAPLR	10	Unmodified	_TRRVVPAPLR_					0	0	0		ENST00000267102.12_1_12:49504484-49504571:-|nuORF	ENST00000267102.12_1_12:49504484-49504571:-|nuORF	ENST00000267102.12_1_12:49504484-49504571:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.858154296875	2	582.869831	1163.72511	-0.83277	-0.0004854	-0.098975	-5.769E-05	-0.93175	-0.00054309	582.8696415924358	100.13	2.7942	100.17	98.386	101.18	0.0411					114	64	2	0	0	0	0.37624	1	10479	10479		36.447	5.9431	1	159250			59294	9527	39620	39636	67259	67259					0.14979599890739337
TRRWHRRKSNY	11	Unmodified	_TRRWHRRKSNY_					0	0	0			REV__ENSG00000198918|ENST00000361575|RPL39	REV__ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.6203002929688	3	520.618663	1558.83416	-0.39044	-0.00020327	1.6525	0.00086033	1.2621	0.00065706	520.6194677908371	59.801	0.56499	60.192	59.808	60.373	0.39077					32	13	3	0	0	0	0.79716	1	6302	6302		11.932	5.2728	1	524540	+		59295	23414	39621	39637	67260	67260					0.07709578842923293
TRSAAVRL	8	Unmodified	_TRSAAVRL_					0	0	0		ENST00000512410.1_1_4:175416602-175443578:-|nuORF	ENST00000512410.1_1_4:175416602-175443578:-|nuORF	ENST00000512410.1_1_4:175416602-175443578:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2657165527344	2	437.266876	872.519199	1.7902	0.0007828	-4.1426	-0.0018114	-2.3524	-0.0010286	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.87922	1	700	700		31.955	0	1	738160			59296	13036	39622	39638	67261	67261					0.0778402671146523
TRSAKTPPSA	10	Unmodified	_TRSAKTPPSA_					0	0	0			REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	508.27984619140625	2	508.28018	1014.54581	-0.88176	-0.00044818	1.0287	0.00052288	0.14696	7.4694E-05	508.28061546250404	88.623	3.7165	88.623	87.469	91.185	0					283	86	4	0	0	0	0.69342	3	8614	8486;8576;8614		45.022	10.85	1	1261800	+		59297	17509	39623	39639	67262;67263;67264	67264					0.03911670812124157
TRSAKTPPSA	10	Unmodified	_TRSAKTPPSA_					0	0	0			REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.280029296875	2	508.28018	1014.54581	-0.055639	-2.828E-05	0.18106	9.2031E-05	0.12542	6.3751E-05	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.83456	1	8982	8982		37.508	0.34906	1	1918800	+		59298	17509	39623	39639	67265	67265					0.03911670812124157
TRSAKTPPSA	10	Unmodified	_TRSAKTPPSA_					0	0	0			REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2797546386719	2	508.28018	1014.54581	1.4316	0.00072764	-1.3468	-0.00068457	0.084746	4.3075E-05	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.82886	6	9115	9115;9127;9162;9174;9282;9391		37.812	5.8567	1	1903500	+		59299	17509	39623	39639	67266;67267;67268;67269;67270;67271	67266					0.03911670812124157
TRSAKTPPSA	10	Unmodified	_TRSAKTPPSA_					0	0	0			REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.27984619140625	2	508.28018	1014.54581	0.22565	0.0001147	-0.11322	-5.7546E-05	0.11244	5.715E-05	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.63899	3	9163	9020;9032;9163		47.96	2.9373	1	1820400	+		59300	17509	39623	39639	67272;67273;67274	67274					0.03911670812124157
TRSAKTPPSA	10	Unmodified	_TRSAKTPPSA_					0	0	0			REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.2799072265625	2	508.28018	1014.54581	-0.39653	-0.00020155	0.29161	0.00014822	-0.10492	-5.3328E-05	508.28028238704144	88.18	3.8891	88.381	87.155	91.044	0.20115					314	92	5	0	0	0	0.63899	1	8662	8662		47.96	1.9873	1	2080300	+		59301	17509	39623	39639	67275	67275					0.03911670812124157
TRSAKTPPSA	10	Unmodified	_TRSAKTPPSA_					0	0	0			REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	REV__ENST00000600252.5_1_19:15219832-15221230:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.28009033203125	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.73395	3	8757	8720;8757;8876		42.864	11.119	1	1954800	+		59302	17509	39623	39639	67276;67277;67278	67277					0.03911670812124157
TRSAQRQHDL	10	Unmodified	_TRSAQRQHDL_					0	0	0			REV__ENSG00000138771|ENST00000296043|SHROOM3	REV__ENSG00000138771|ENST00000296043|SHROOM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	404.5467834472656	3	404.54617	1210.61668	2.7647	0.0011184	-0.1731	-7.0027E-05	2.5916	0.0010484	404.5459732463336	28.095	0.54025	28.072	27.768	28.308	-0.023556					23	12	2	0	0	0	0.86471	1	1320	1320		22.562	0	1	48975	+		59303	19505	39624	39640	67279	67279					0.019797638496584113
TRSAQSLL	8	Unmodified	_TRSAQSLL_					0	0	0			REV__ENSG00000185028|ENST00000328278|LRRC14B	REV__ENSG00000185028|ENST00000328278|LRRC14B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2633056640625	2	438.250892	874.48723	-1.5853	-0.00069478	-1.0124	-0.00044367	-2.5977	-0.0011384	438.2506222738521	35.452	0.41547	35.483	35.31	35.726	0.031132					16	11	2	0	0	0	0.4196	1	1874	1874		51.335	12.083	1	106150	+		59304	22730	39625	39641	67280	67280					0.04496614237655194
TRSAQSLL	8	Unmodified	_TRSAQSLL_					0	0	0			REV__ENSG00000185028|ENST00000328278|LRRC14B	REV__ENSG00000185028|ENST00000328278|LRRC14B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2635803222656	2	438.250892	874.48723	0.29858	0.00013085	1.8862	0.00082664	2.1848	0.00095749	438.25237505838186	34.881	0.188	35.091	34.978	35.166	0.21003					10	4	4	0	0	0	0.4196	1	2605	2605		51.335	8.9393	1	422900	+		59305	22730	39625	39641	67281	67281					0.04496614237655194
TRSCHLTVRPL	11	Unmodified	_TRSCHLTVRPL_					0	0	0			REV__ENSG00000104356|ENST00000401707|POP1	REV__ENSG00000104356|ENST00000401707|POP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3605346679688	2	641.856064	1281.69757	1.7061	0.001095	3.8489	0.0024705	5.555	0.0035655	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.59499	1	13103	13103		45.022	5.7694	1	27133000	+		59306	17450	39626	39642	67282	67282					0.06799328568195051
TRSGEPTE	8	Unmodified	_TRSGEPTE_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2626037597656	2	438.706514	875.398475	-1.4565	-0.00063896	-1.632	-0.00071597	-3.0885	-0.0013549	438.70554112364385	41.867	0.19444	42.501	42.392	42.586	0.6339					6	4	2	0	0	0	0.4196	1	3709	3709		58.782	12.83	1	60026	+		59307	20385;29943	39627	39643	67283	67283					-0.04420845792662931
TRSKRSTLL	9	Unmodified	_TRSKRSTLL_					0	0	0		ENSG00000149218|ENST00000278505|ENDOD1	ENSG00000149218|ENST00000278505|ENDOD1	ENSG00000149218|ENST00000278505|ENDOD1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3309326171875	2	531.324922	1060.63529	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.92	1	106.11	105.61	106.61	0.18647								0	0	0	0.29134	1	12958	12958		34.173	0	1				59308	5006	39628	39644	67284	67284					0.10739925491520808
TRSKSRRR	8	Unmodified	_TRSKSRRR_					0	0	0			REV__ENSG00000103021|ENST00000219299|CCDC113	REV__ENSG00000103021|ENST00000219299|CCDC113	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8208618164062	2	523.81813	1045.62171	2.3131	0.0012117	2.4967	0.0013078	4.8098	0.0025195	523.8194058340142	104.59	1.4884	104.78	103.64	105.13	0.18888					65	37	2	0	0	0	0.89494	1	12734	12734		37.159	0	1	239400	+		59309	17378	39629	39645	67285	67285					0.1007211250293949
TRSLARDG	8	Unmodified	_TRSLARDG_					0	0	0			REV__nc|ENSG00000101019|Q9NVA1-5|UQCC1	REV__nc|ENSG00000101019|Q9NVA1-5|UQCC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2633056640625	2	438.238316	874.462078	1.5288	0.00066998	-3.5371	-0.0015501	-2.0083	-0.00088009	438.2361372765777	34.846	1.0807	35.227	34.934	36.015	0.3812					41	27	3	0	0	0	0.4196	1	2713	2713		45.972	27.71	1	704270	+		59310	17237	39630	39646	67286	67286					0.01982559435089115
TRSLARDG	8	Unmodified	_TRSLARDG_					0	0	0			REV__nc|ENSG00000101019|Q9NVA1-5|UQCC1	REV__nc|ENSG00000101019|Q9NVA1-5|UQCC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.26190185546875	2	438.238316	874.462078	-1.2518	-0.00054857	-0.49233	-0.00021576	-1.7441	-0.00076433	438.2380794991893	40.777	0.1996	41.366	41.181	41.381	0.58915					9	5	2	0	0	0	0.4196	1	3505	3505		58.782	0	1	1215600	+		59311	17237	39630	39646	67287	67287					0.01982559435089115
TRSLGRAEV	9	Unmodified	_TRSLGRAEV_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.7799987792969	2	494.780348	987.546142	-1.5759	-0.00077971	1.7163	0.00084921	0.14047	6.95E-05	494.7811045797973	86.259	4.0937	86.417	84.675	88.769	0.15851					200	95	3	0	0	0	0.78912	1	8370	8370		28.081	0.19925	1	569520			59312	8822	39631	39647	67288	67288					0.051870905319901794
TRSPKLFVVF	10	Unmodified	_TRSPKLFVVF_					0	0	0		nc|ENSG00000173200|Q460N3-2|PARP15;ENSG00000173200|ENST00000464300|PARP15	nc|ENSG00000173200|Q460N3-2|PARP15	nc|ENSG00000173200|Q460N3-2|PARP15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3588256835938	2	597.355691	1192.69683	3.0849	0.0018428	1.4245	0.00085092	4.5094	0.0026937	597.3562180293547	100.36	3.052	100.31	99.202	102.25	-0.052116					175	71	4	0	0	0	0.86348	1	10876	10876		31.53	3.6476	1	3981300			59313	15101	39632	39648	67289	67289					0.10818857190770359
TRSPTLVGASA	11	Unmodified	_TRSPTLVGASA_					0	0	0			REV__ENST00000542820.5_1_12:124458599-124458797:+|nuORF	REV__ENST00000542820.5_1_12:124458599-124458797:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.29296875	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.69248	1	9451	9451		32.751	2.4328	1	1864800	+		59314	28503	39633	39649	67290	67290					0.04507939983614051
TRSQLSAL	8	Unmodified	_TRSQLSAL_					0	0	0		ENST00000598255.5_1_19:8429205-8436046:+|nuORF;ENST00000594348.1_1_19:8429070-8436049:+|nuORF;nc|ENSG00000167772|Q9BY76-2|ANGPTL4;ENSG00000167772|ENST00000301455|ANGPTL4	ENST00000598255.5_1_19:8429205-8436046:+|nuORF	ENST00000598255.5_1_19:8429205-8436046:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.26483154296875	2	438.250892	874.48723	-1.206	-0.00052853	3.6541	0.0016014	2.4481	0.0010729	438.2525446790423	40.543	0.38479	41.132	40.797	41.181	0.58915					19	10	2	0	0	0	0.4196	1	3469	3469		20.947	0	1	851260			59315	6331	39634	39650	67291	67291					0.04496614237655194
TRSQRGTA	8	Unmodified	_TRSQRGTA_					0	0	0			REV__ENST00000349841.9_1_3:169490842-169491142:+|nuORF	REV__ENST00000349841.9_1_3:169490842-169491142:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.261474609375	2	438.73594	875.457327	-2.31	-0.0010135	2.4467	0.0010734	0.13666	5.9959E-05	438.7370174683124	40.656	0.16321	41.048	40.935	41.098	0.39209					7	4	2	0	0	0	0.4196	1	3493	3493		47.657	0	1	480660	+		59316	25337	39635	39651	67292	67292					0.01461675292318887
TRSRLPLFM	9	Unmodified	_TRSRLPLFM_					0	0	0			REV__ENSG00000142867|ENST00000648566|BCL10	REV__ENSG00000142867|ENST00000648566|BCL10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8194580078125	2	560.818418	1119.62228	-1.4169	-0.00079462	3.9435	0.0022116	2.5266	0.001417	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.78536	1	9343	9343		29.15	4.6304	1	758020	+		59317	19757	39636	39652	67293	67293					0.06725771107767287
TRSTPSPM	8	Unmodified	_TRSTPSPM_					0	0	0		ENST00000318753.12_1_22:24985823-24985907:-|nuORF	ENST00000318753.12_1_22:24985823-24985907:-|nuORF	ENST00000318753.12_1_22:24985823-24985907:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633972167969	2	438.715827	875.417102	-0.2252	-9.88E-05	-2.8424	-0.001247	-3.0676	-0.0013458	438.7146443086045	37.547	0.52715	37.558	37.285	37.812	0.011173					14	11	2	0	0	0	0.4196	1	2513	2513		47.916	3.7988	1	28448			59318	10010	39637	39653	67294	67294					-0.025590074224624004
TRSVGCLANRA	11	Unmodified	_TRSVGCLANRA_					0	0	0			REV__ENST00000334815.4_1_1:45792596-45792884:+|nuORF	REV__ENST00000334815.4_1_1:45792596-45792884:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.6732788085938	2	574.303664	1146.59277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.403	1	70.533	70.033	71.033	0.12965								0	0	0	0.56276	1	6400	6400		49.536	5.1589	1		+		59319	25163	39638	39654	67295	67295					0.02534207091616736
TRSVVILS	8	Unmodified	_TRSVVILS_					0	0	0			REV__ENST00000395811.9_1_17:17090115-17090496:+|nuORF	REV__ENST00000395811.9_1_17:17090115-17090496:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7713623046875	2	437.77146	873.528367	-2.0028	-0.00087676	0.34136	0.00014944	-1.6614	-0.00072733	437.7717477191302	40.214	2.554	40.591	39.609	42.163	0.3765					138	67	4	0	0	0	0.8347	1	3380	3380		23.042	0	1	10119000	+		59320	26123	39639	39655	67296	67296					0.08654375277149029
TRSWILVN	8	Unmodified	_TRSWILVN_					0	0	0		ENST00000585223.1_1_17:62500698-62502378:-|nuORF	ENST00000585223.1_1_17:62500698-62502378:-|nuORF	ENST00000585223.1_1_17:62500698-62502378:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7796325683594	2	494.782359	987.550165	-0.075057	-3.7137E-05	-4.2464	-0.002101	-4.3214	-0.0021382	494.7801083626478	84.098	2.6315	84.165	82.573	85.204	0.067001					119	60	3	0	0	0	0.87479	1	8347	8347		30.504	1.3541	1	230560			59321	14144	39640	39656	67297	67297					0.05589180025708629
TRTALWCALQ	10	Unmodified	_TRTALWCALQ_					0	0	0		ENSG00000180336|ENST00000409122|MEIOC;nc|ENSG00000180336|A2RUB1-2|MEIOC	ENSG00000180336|ENST00000409122|MEIOC	ENSG00000180336|ENST00000409122|MEIOC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	581.8043823242188	2	581.805508	1161.59646	-1.759	-0.0010234	-1.1842	-0.00068895	-2.9431	-0.0017123	581.8047058865073	62.986	1.4271	63.374	62.752	64.179	0.3878					94	32	4	0	0	0	0.35939	1	6741	6741		67.494	2.0283	1	1535400			59322	7325	39641	39657	67298	67298					0.022128768654965825
TRTDERAKK	9	Unmodified	_TRTDERAKK_					0	0	0			REV__ENSG00000176102|ENST00000323959|CSTF3	REV__ENSG00000176102|ENST00000323959|CSTF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.81591796875	2	552.809636	1103.60472	0.84574	0.00046753	2.9538	0.0016329	3.7995	0.0021004	552.8111137403027	28.325	0.86969	28.151	27.89	28.76	-0.17336					45	21	3	0	0	0	0.6204	1	1744	1744		45.972	4.5456	1	373020	+		59323	22109	39642	39658	67299	67299					0.05706147106457138
TRTHMQFG	8	Unmodified	_TRTHMQFG_					0	0	0			REV__nc|ENSG00000110514|Q8WXG6-6|MADD	REV__nc|ENSG00000110514|Q8WXG6-6|MADD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	489.23590087890625	2	489.234719	976.454884	-0.22761	-0.00011136	3.7202	0.00182	3.4926	0.0017087	489.2364963124142	86.068	2.1429	86.511	85.703	87.846	0.44331					118	51	4	0	0	0	0.87479	1	10088	10088		30.504	0	1	3099300	+		59324	17820	39643	39659	67300	67300					-0.03428496436970363
TRTRLVVE	8	Unmodified	_TRTRLVVE_					0	0	0			REV__ENST00000605039.5_1_12:51675285-51695971:-|nuORF	REV__ENST00000605039.5_1_12:51675285-51695971:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.2926940917969	2	487.293091	972.571629	-0.085832	-4.1825E-05	0.30463	0.00014844	0.2188	0.00010662	487.29311557745604	91.223	2.7335	91.293	90.723	93.457	0.069328					138	65	3	0	0	0	0.87064	2	9445	9396;9445		34.173	1.3601	1	2116800	+		59325	17841	39644	39660	67301;67302	67302					0.08424565054428967
TRTTCISGH	9	Unmodified	_TRTTCISGH_					0	0	0		ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	488.237060546875	2	488.237458	974.460364	0.42909	0.0002095	2.4196	0.0011813	2.8486	0.0013908	488.2385342290814	60.594	0.80984	60.711	60.313	61.123	0.11676					92	32	5	0	0	0	0.64922	1	5278	5278		44.117	1.2525	1	1254500			59326	11300	39645	39661	67303	67303					-0.027888176451710933
TRTTCISGH	9	Unmodified	_TRTTCISGH_					0	0	0		ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	488.237458	974.460364	-1.3983	-0.0006827	4.4842	0.0021894	3.0859	0.0015067	488.2395869337564	60.648	0.67235	60.648	60.382	61.055	0	-0.14616	0.0013098	NaN	44.117	53	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	250300			59327	11300	39645	39661							-0.027888176451710933
TRTTCISGH	9	Unmodified	_TRTTCISGH_					0	0	0		ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	488.237458	974.460364	-0.086542	-4.2253E-05	3.0439	0.0014861	2.9573	0.0014439	488.23845135786803	60.975	0.52884	60.963	60.61	61.139	-0.012199	0.16925	-9.6638E-05	NaN	44.117	41	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	232910			59328	11300	39645	39661							-0.027888176451710933
TRTTCISGH	9	Unmodified	_TRTTCISGH_					0	0	0		ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	488.237458	974.460364	0.17827	8.7038E-05	1.7077	0.00083377	1.886	0.0009208	488.23825048716003	60.976	0.46817	60.943	60.604	61.072	-0.032509	0.14952	-0.0014014	NaN	44.117	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	201860			59329	11300	39645	39661							-0.027888176451710933
TRTTCISGH	9	Unmodified	_TRTTCISGH_					0	0	0		ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	488.237458	974.460364	-2.8091	-0.0013715	3.9338	0.0019206	1.1247	0.00054911	488.2392448079534	60.949	0.34784	60.981	60.717	61.065	0.0312	0.18688	0.00077234	NaN	44.117	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	193560			59330	11300	39645	39661							-0.027888176451710933
TRTTCISGH	9	Unmodified	_TRTTCISGH_					0	0	0		ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	488.237458	974.460364	-0.74489	-0.00036368	3.0991	0.0015131	2.3542	0.0011494	488.2389720091914	60.599	0.73972	60.7	60.395	61.135	0.10082	-0.093473	-4.2677E-05	NaN	44.117	93	32	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1383100			59331	11300	39645	39661							-0.027888176451710933
TRTTCISGH	9	Unmodified	_TRTTCISGH_					0	0	0		ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	ENST00000409198.5_2_2:152506865-152507290:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	488.237458	974.460364	-1.065	-0.00051998	3.0812	0.0015043	2.0162	0.00098436	488.23810993838913	60.274	0.18439	60.665	60.57	60.754	0.39077	-0.12865	-6.0222E-05	NaN	44.117	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116290			59332	11300	39645	39661							-0.027888176451710933
TRVAIRVM	8	Unmodified	_TRVAIRVM_					0	0	0			REV__nc|ENSG00000038532|Q2KHT3-2|CLEC16A	REV__nc|ENSG00000038532|Q2KHT3-2|CLEC16A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.5772705078125	2	473.286754	944.558955	-0.46636	-0.00022072	0.21022	9.9493E-05	-0.25614	-0.00012123	473.28667071912133	34.139	0.6587	34.083	33.743	34.401	-0.056385					22	14	2	0	0	0	0.4196	1	2121	2121		17.365	0	1	51085	+		59333	16306	39646	39662	67304	67304					0.08445830390530773
TRVKIGAVAH	10	Unmodified	_TRVKIGAVAH_					0	0	0			REV__ENST00000393902.3_X:151937896-151938100:-|nuORF	REV__ENST00000393902.3_X:151937896-151938100:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.824462890625	2	526.322183	1050.62981	0.47734	0.00025124	4.3102	0.0022686	4.7876	0.0025198	526.3243924608943	61.628	1.0384	61.747	61.573	62.611	0.11901					72	48	2	0	0	0	0.86718	1	5370	5370		27.882	0	1	411810	+		59334	26068	39647	39663	67305	67305					0.10652246699692114
TRVNKSVT	8	Unmodified	_TRVNKSVT_					0	0	0		ENST00000579996.5_1_17:62498282-62498336:-|nuORF	ENST00000579996.5_1_17:62498282-62498336:-|nuORF	ENST00000579996.5_1_17:62498282-62498336:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.76385498046875	2	452.764166	903.513779	0.15107	6.8398E-05	-2.3595	-0.0010683	-2.2085	-0.00099991	452.7631190249679	39.832	0.73378	39.802	39.439	40.173	-0.03027					38	17	3	0	0	0	0.89962	1	2781	2781		38.806	1.647	1	134080			59335	14092	39648	39664	67306	67306					0.05816303128983691
TRVQKHRKILR	11	Unmodified	_TRVQKHRKILR_					0	0	0		ENST00000443339.5_1_3:9475802-9506425:+|nuORF;nc|ENSG00000168137|Q9C0A6-2|SETD5;nc|ENSG00000168137|Q9C0A6-3|SETD5;ENSG00000168137|ENST00000402198|SETD5	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9743347167969	3	478.975788	1433.90553	-1.6535	-0.00079198	-1.1033	-0.00052846	-2.7568	-0.0013204	478.9751695370533	46.569	1.7531	46.569	45.63	47.383	0					120	48	3	0	0	0	0.81407	1	3526	3526		8.4073	0.37291	1	252010			59336	11803	39649	39665	67307	67307					0.2059369854760007
TRVQKHRKILR	11	Unmodified	_TRVQKHRKILR_					0	0	0		ENST00000443339.5_1_3:9475802-9506425:+|nuORF;nc|ENSG00000168137|Q9C0A6-2|SETD5;nc|ENSG00000168137|Q9C0A6-3|SETD5;ENSG00000168137|ENST00000402198|SETD5	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9742126464844	3	478.975788	1433.90553	-1.0377	-0.00049701	-2.8379	-0.0013593	-3.8755	-0.0018563	478.97440370036395	43.258	1.9554	43.222	42.189	44.144	-0.035816					117	46	4	0	0	0	0.79945	2	3368	3368;3379		11.455	1.0157	1	472330			59337	11803	39649	39665	67308;67309	67308					0.2059369854760007
TRVQKHRKILR	11	Unmodified	_TRVQKHRKILR_					0	0	0		ENST00000443339.5_1_3:9475802-9506425:+|nuORF;nc|ENSG00000168137|Q9C0A6-2|SETD5;nc|ENSG00000168137|Q9C0A6-3|SETD5;ENSG00000168137|ENST00000402198|SETD5	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.9736022949219	3	478.975788	1433.90553	-0.79395	-0.00038028	-1.9266	-0.0009228	-2.7206	-0.0013031	478.9747699681175	46.852	2.0236	46.823	45.583	47.607	-0.028782					130	52	3	0	0	0	0.81407	1	3949	3949		8.4073	0	1	237090			59338	11803	39649	39665	67310	67310					0.2059369854760007
TRVQKHRKILR	11	Unmodified	_TRVQKHRKILR_					0	0	0		ENST00000443339.5_1_3:9475802-9506425:+|nuORF;nc|ENSG00000168137|Q9C0A6-2|SETD5;nc|ENSG00000168137|Q9C0A6-3|SETD5;ENSG00000168137|ENST00000402198|SETD5	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9738464355469	3	478.975788	1433.90553	-1.9678	-0.00094254	-1.893	-0.00090669	-3.8608	-0.0018492	479.30912300096907	43.377	1.5252	43.377	42.724	44.249	0.00016785					100	36	3	0	0	0	0.82431	1	3322	3322		7.6794	0.33806	1	374940			59339	11803	39649	39665	67311	67311					0.2059369854760007
TRVQKHRKILR	11	Unmodified	_TRVQKHRKILR_					0	0	0		ENST00000443339.5_1_3:9475802-9506425:+|nuORF;nc|ENSG00000168137|Q9C0A6-2|SETD5;nc|ENSG00000168137|Q9C0A6-3|SETD5;ENSG00000168137|ENST00000402198|SETD5	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.9737548828125	3	478.975788	1433.90553	-0.90277	-0.0004324	-1.6609	-0.00079555	-2.5637	-0.001228	478.97487033218596	49.369	1.842	49.394	48.497	50.339	0.025578					115	47	3	0	0	0	0.80373	1	3887	3887		10.562	0.41735	1	238510			59340	11803	39649	39665	67312	67312					0.2059369854760007
TRVQKHRKILR	11	Unmodified	_TRVQKHRKILR_					0	0	0		ENST00000443339.5_1_3:9475802-9506425:+|nuORF;nc|ENSG00000168137|Q9C0A6-2|SETD5;nc|ENSG00000168137|Q9C0A6-3|SETD5;ENSG00000168137|ENST00000402198|SETD5	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9735107421875	3	478.975788	1433.90553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.349	1	60.352	59.852	60.852	0.0037193								0	0	0	0.56276	1	5222	5222		21.032	7.5243	1				59341	11803	39649	39665	67313	67313					0.2059369854760007
TRVQKHRKILR	11	Unmodified	_TRVQKHRKILR_					0	0	0		ENST00000443339.5_1_3:9475802-9506425:+|nuORF;nc|ENSG00000168137|Q9C0A6-2|SETD5;nc|ENSG00000168137|Q9C0A6-3|SETD5;ENSG00000168137|ENST00000402198|SETD5	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.97247314453125	3	478.975788	1433.90553	-2.3958	-0.0011475	-1.9742	-0.0009456	-4.37	-0.0020931	479.30894163677516	41.278	0.94159	41.912	41.604	42.546	0.6339					102	25	5	0	0	0	0.79945	1	3593	3593		11.455	3.0474	1	6785400			59342	11803	39649	39665	67314	67314					0.2059369854760007
TRWDRTLHKV	10	Unmodified	_TRWDRTLHKV_					0	0	0			REV__ENSG00000166173|ENST00000299213|LARP6	REV__ENSG00000166173|ENST00000299213|LARP6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2630920410156	3	437.914194	1310.72075	-1.1502	-0.00050369	-0.38583	-0.00016896	-1.536	-0.00067265	437.91374794279426	43.046	0.80163	43.01	42.56	43.362	-0.035816					24	18	2	0	0	0	0.37624	1	3334	3334		18.531	1.3643	1	64155	+		59343	21262	39650	39666	67315	67315					0.07782090677164888
TRWENISKKK	10	Unmodified	_TRWENISKKK_					0	0	0		ENST00000261716.7_1_17:27876830-27877082:+|nuORF	ENST00000261716.7_1_17:27876830-27877082:+|nuORF	ENST00000261716.7_1_17:27876830-27877082:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7505187988281	3	430.582333	1288.72517	0.57074	0.00024575	1.0952	0.00047156	1.6659	0.00071731	430.582839454717	35.315	1.0672	35.563	35.128	36.195	0.24769					43	27	2	0	0	0	0.37624	1	2684	2684		63.426	16.199	1	236270			59344	9413	39651	39667	67316	67316					0.09235555100053716
TRYRNVKRNYN	11	Unmodified	_TRYRNVKRNYN_					0	0	0		ENSG00000164256|ENST00000296682|PRDM9	ENSG00000164256|ENST00000296682|PRDM9	ENSG00000164256|ENST00000296682|PRDM9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.6036071777344	3	495.267407	1482.78039	0.16647	8.2447E-05	1.9719	0.00097661	2.1384	0.0010591	495.2683192539746	16.057	0.35696	15.459	15.291	15.648	-0.59873					14	7	3	0	0	0	0.80593	1	80	80		10.104	0	1	103300			59345	5944	39652	39668	67317	67317					0.05831361620585085
TSAATKTVK	9	Unmodified	_TSAATKTVK_					0	0	0		ENST00000569795.5_1_15:72563478-72564742:-|nuORF	ENST00000569795.5_1_15:72563478-72564742:-|nuORF	ENST00000569795.5_1_15:72563478-72564742:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.76519775390625	2	453.766374	905.518196	-0.098866	-4.4862E-05	-1.4473	-0.00065673	-1.5461	-0.00070159	453.7655359393201	41.096	0.91404	41.05	40.674	41.588	-0.045467					76	30	3	0	0	0	0.77244	1	2717	2717		32.812	7.2384	1	750830			59346	13984	39653	39669	67318	67318					0.0616576755190863
TSAIKVNQV	9	Unmodified	_TSAIKVNQV_					0	0	0		ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	ENSG00000187833|ENST00000409561|C2orf78	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.2780456542969	2	480.279649	958.544745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.513	1	26.558	26.058	27.058	0.045507								0	0	0	0.32758	1	1129	1129		20.947	0	1				59347	7887	39654	39670	67319	67319					0.06381456443239131
TSAQFTKKAE	10	Unmodified	_TSAQFTKKAE_					0	0	0			REV__nc|ENSG00000198089|A8K8P3-4|SFI1	REV__nc|ENSG00000198089|A8K8P3-4|SFI1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.797119140625	2	555.793121	1109.57169	0.20135	0.00011191	-1.1163	-0.00062046	-0.915	-0.00050855	555.7922473468034	26.79	0.54313	26.752	26.532	27.075	-0.038525					28	13	3	0	0	0	0.37624	1	1256	1256		24.519	0	1	56464	+		59348	30144	39655	39671	67320	67320					0.021285202637500333
TSAVNVLEKE	10	Unmodified	_TSAVNVLEKE_					0	0	0		ENST00000418919.6_1_12:65108638-65108725:-|nuORF	ENST00000418919.6_1_12:65108638-65108725:-|nuORF	ENST00000418919.6_1_12:65108638-65108725:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.16259765625	2	545.292953	1088.57135	-1.6135	-0.00087982	0.71695	0.00039095	-0.89653	-0.00048887	545.2933571767519	43.997	0.41413	44.771	44.542	44.956	0.7738					14	9	2	0	0	0	0.37624	1	4029	4029		31.634	8.1116	1	186820			59349	11433	39656	39672	67321	67321					0.030611005439368455
TSCDTIVETQS	11	Unmodified	_TSCDTIVETQS_					0	0	0			REV__ENSG00000174946|ENST00000309180|GPR171	REV__ENSG00000174946|ENST00000309180|GPR171	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	592.2896728515625	2	592.260993	1182.50743	-1.0927	-0.00064719	2.1247	0.0012584	1.032	0.0006112	592.2618228000748	44.082	0.3472	44.082	43.938	44.285	0					10	7	2	0	0	0	0.17243	1	3175	3175		20.03	0	1	41920	+		59350	22029	39657	39673	67322	67322					-0.07652047675333051
TSDELQFGY	9	Unmodified	_TSDELQFGY_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.23583984375	2	530.235104	1058.45566	-0.036058	-1.9119E-05	0.075675	4.0126E-05	0.039618	2.1007E-05	530.2349031045943	69.333	0.41327	69.359	69.226	69.639	0.02636					35	22	2	0	0	0	0.64922	1	6568	6568		44.117	10.601	1	163600			59351	5109	39658	39674	67323	67323					-0.07123423306939003
TSDELQFGY	9	Unmodified	_TSDELQFGY_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.7332153320312	2	530.235104	1058.45566	-0.17854	-9.4669E-05	0.16074	8.5228E-05	-0.017805	-9.441E-06	530.2348986421288	69.335	0.37477	69.298	69.107	69.481	-0.036957					34	19	2	0	0	0	0.11055	2	6703	6703;6705		90.37	18.992	1	118930			59352	5109	39658	39674	67324;67325	67324					-0.07123423306939003
TSDELQFGY	9	Unmodified	_TSDELQFGY_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2365112304688	2	530.235104	1058.45566	-0.040596	-2.1525E-05	0.097516	5.1706E-05	0.05692	3.0181E-05	530.2349879778363	69.248	0.4558	69.281	68.996	69.451	0.032997					41	22	2	0	0	0	0.51307	3	6624	6624;6630;6637		51.335	7.723	1	127830			59353	5109	39658	39674	67326;67327;67328	67326					-0.07123423306939003
TSDKTCNPK	9	Unmodified	_TSDKTCNPK_					0	0	0			REV__ENSG00000164031|ENST00000442697|DNAJB14	REV__ENSG00000164031|ENST00000442697|DNAJB14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.2352294921875	2	497.237124	992.459695	-0.97911	-0.00048685	-2.3028	-0.001145	-3.2819	-0.0016319	497.2358257627969	30.388	0.94661	30.373	29.891	30.837	-0.015167					56	23	3	0	0	0	0.44421	1	1611	1611		54.776	1.8396	1	279140	+		59354	21010	39659	39675	67329	67329					-0.03683657084877723
TSDVGFLPL	9	Unmodified	_TSDVGFLPL_					0	0	0		nc|ENSG00000042062|Q96MK2|RIPOR3;ENSG00000042062|ENST00000327979|RIPOR3;nc|ENSG00000042062|Q96MK2-2|RIPOR3;ENST00000462493.1_1_20:49214115-49253138:-|nuORF	nc|ENSG00000042062|Q96MK2|RIPOR3	nc|ENSG00000042062|Q96MK2|RIPOR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.7564392089844	2	474.755475	947.496398	1.6634	0.00078972	2.2421	0.0010645	3.9056	0.0018542	474.7563413437398	96.023	1.0787	96.444	95.948	97.027	0.42051					59	25	3	0	0	0	0.099874	1	11498	11498		92.191	3.5478	1	675520			59355	935	39660	39676	67330	67330					0.020549628033450063
TSDVGFLPL	9	Unmodified	_TSDVGFLPL_					0	0	0		nc|ENSG00000042062|Q96MK2|RIPOR3;ENSG00000042062|ENST00000327979|RIPOR3;nc|ENSG00000042062|Q96MK2-2|RIPOR3;ENST00000462493.1_1_20:49214115-49253138:-|nuORF	nc|ENSG00000042062|Q96MK2|RIPOR3	nc|ENSG00000042062|Q96MK2|RIPOR3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	474.755475	947.496398	-0.1043	-4.9517E-05	4.4182	0.0020976	4.3139	0.0020481	474.75717902695	96.222	0.77464	96.288	95.88	96.655	0.06591	-0.0064148	0.0011261	NaN	92.191	21	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125720			59356	935	39660	39676							0.020549628033450063
TSDVGFLPL	9	Unmodified	_TSDVGFLPL_					0	0	0		nc|ENSG00000042062|Q96MK2|RIPOR3;ENSG00000042062|ENST00000327979|RIPOR3;nc|ENSG00000042062|Q96MK2-2|RIPOR3;ENST00000462493.1_1_20:49214115-49253138:-|nuORF	nc|ENSG00000042062|Q96MK2|RIPOR3	nc|ENSG00000042062|Q96MK2|RIPOR3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	474.755475	947.496398	2.1135	0.0010034	3.6597	0.0017375	5.7733	0.0027409	474.75603953428976	96.256	1.0798	96.199	95.721	96.801	-0.056381	-0.095357	0.0004059	NaN	92.191	37	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99315			59357	935	39660	39676							0.020549628033450063
TSDVGFLPL	9	Unmodified	_TSDVGFLPL_					0	0	0		nc|ENSG00000042062|Q96MK2|RIPOR3;ENSG00000042062|ENST00000327979|RIPOR3;nc|ENSG00000042062|Q96MK2-2|RIPOR3;ENST00000462493.1_1_20:49214115-49253138:-|nuORF	nc|ENSG00000042062|Q96MK2|RIPOR3	nc|ENSG00000042062|Q96MK2|RIPOR3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	474.755475	947.496398	-0.17554	-8.3339E-05	4.7146	0.0022383	4.5391	0.002155	474.7570693704256	96.024	0.69144	96.071	95.706	96.397	0.046982	-0.22329	0.0014075	NaN	92.191	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118080			59358	935	39660	39676							0.020549628033450063
TSFIITISHPT	11	Unmodified	_TSFIITISHPT_					0	0	0		ENSG00000169894|ENST00000379458|MUC3A;nc|ENSG00000169894|Q02505-2|MUC3A;nc|ENSG00000169894|Q02505-3|MUC3A;nc|ENSG00000169894|Q02505-4|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A	ENSG00000169894|ENST00000379458|MUC3A	ENSG00000169894|ENST00000379458|MUC3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.8367309570312	2	608.832246	1215.64994	5.8969	0.0035902	2.8234	0.001719	8.7203	0.0053092	608.8338483742878	110.97	0.68941	111.02	110.65	111.33	0.049088					52	27	4	0	0	0	0.76322	1	13468	13468		19.104	0	1	202050			59359	6536	39661	39677	67331	67331					0.05073952848988483
TSFYKKKTG	9	Unmodified	_TSFYKKKTG_					0	0	0			REV__nc|ENSG00000133110|Q15063-7|POSTN	REV__nc|ENSG00000133110|Q15063-7|POSTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2931518554688	2	530.295299	1058.57605	-0.034361	-1.8221E-05	-3.4792	-0.001845	-3.5136	-0.0018632	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.67345	1	9438	9438		42.396	3.6425	1	1852900	+	+	59360	19057	39662	39678	67332	67332					0.04910029477309763
TSGCHMLSPK	10	Unmodified	_TSGCHMLSPK_					0	0	0		ENST00000475185.5_1_18:20877516-20877840:-|nuORF	ENST00000475185.5_1_18:20877516-20877840:-|nuORF	ENST00000475185.5_1_18:20877516-20877840:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.305908203125	2	530.749344	1059.48414	1.0444	0.00055433	-1.5141	-0.0008036	-0.46965	-0.00024926	530.7462624016208	33.545	0.12676	33.85	33.745	33.871	0.30494					4	2	2	0	0	0	0.37624	1	2438	2438		35.618	0	1	37291			59361	12318	39663	39679	67333	67333					-0.043227202030038825
TSGCKVKKH	9	Unmodified	_TSGCKVKKH_					0	0	0		nc|ENSG00000147526|O75410-7|TACC1;ENST00000522955.5_1_8:38663104-38684943:+|nuORF;nc|ENSG00000147526|O75410-3|TACC1;nc|ENSG00000147526|O75410-9|TACC1;ENSG00000147526|ENST00000317827|TACC1	nc|ENSG00000147526|O75410-7|TACC1	nc|ENSG00000147526|O75410-7|TACC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.6479187011719	2	494.273844	986.533135	-1.9981	-0.00098761	-3.5524	-0.0017559	-5.5505	-0.0027435	494.27188971961004	42.566	0.94009	43.264	42.81	43.75	0.69754					36	22	2	0	0	0	0.20789	1	3761	3761		34.173	0	1	352740			59362	14979	39664	39680	67334	67334					0.039329361482487
TSGDYDLTA	9	Unmodified	_TSGDYDLTA_					0	0	0			REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1	REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.76898193359375	2	471.70618	941.397806	-0.68822	-0.00032464	2.3732	0.0011195	1.685	0.00079483	471.7072592922404	50.555	0.2998	50.531	50.34	50.64	-0.02343					10	6	2	0	0	0	0.20789	1	4398	4398		27.882	13.745	1	25127	+		59363	22179	39665	39681	67335	67335					-0.07523685232399657
TSGEGQDIWDM	11	Unmodified	_TSGEGQDIWDM_					0	0	0		ENSG00000042088|ENST00000335725|TDP1	ENSG00000042088|ENST00000335725|TDP1	ENSG00000042088|ENST00000335725|TDP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8690185546875	2	619.753335	1237.49212	0.61969	0.00038406	-3.2074	-0.0019878	-2.5877	-0.0016037	619.7511798867002	93.712	0.72835	93.758	93.406	94.135	0.045456					41	16	3	0	0	0	0.17527	1	9860	9860		32.751	11.913	1	375730			59364	936	39666	39682	67336	67336					-0.11712914472559532
TSGPEDICSSS	11	Unmodified	_TSGPEDICSSS_					0	0	0		ENSG00000114745|ENST00000319283|GORASP1;ENST00000441302.6_1_3:39139729-39142014:-|nuORF	ENSG00000114745|ENST00000319283|GORASP1	ENSG00000114745|ENST00000319283|GORASP1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	541.7182006835938	2	541.718961	1081.42337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.47	1	17.533	17.033	18.033	0.062603								0	0	0	0.56276	1	252	252		19.104	1.6355	1				59365	2788	39667	39683	67337	67337					-0.11408578772261535
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7689208984375	2	470.769783	939.525013	-1.6666	-0.00078458	-0.44144	-0.00020782	-2.108	-0.0009924	470.76948436620563	48.56	1.0696	48.56	48.244	49.314	0					49	25	3	0	0	0	0.73802	1	3787	3787		37.812	2.1932	1	317180			59366	10853	39668	39684	67338	67338					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7687683105469	2	470.769783	939.525013	-1.6346	-0.00076952	0.1281	6.0304E-05	-1.5065	-0.00070922	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.6204	1	4094	4094		45.972	3.5761	1	1359900			59367	10853	39668	39684	67339	67339					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7689208984375	2	470.769783	939.525013	-0.039118	-1.8416E-05	-1.6086	-0.0007573	-1.6478	-0.00077572	470.76888428229023	53.107	1.8265	53.104	52.614	54.44	-0.0033035					119	53	3	0	0	0	0.44421	4	4665	4644;4665;4676;4716		54.776	2.1932	1	1606400			59368	10853	39668	39684	67340;67341;67342;67343	67341					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.7690734863281	2	470.769783	939.525013	-0.63239	-0.00029771	-1.0756	-0.00050635	-1.708	-0.00080406	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.44421	2	4737	4737;4827		54.776	3.108	1	1468500			59369	10853	39668	39684	67344;67345	67344					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.76898193359375	2	470.769783	939.525013	-0.46187	-0.00021743	-0.8461	-0.00039832	-1.308	-0.00061575	470.7692030231674	55.133	1.6853	55.107	54.397	56.082	-0.025955					109	47	3	0	0	0	0.58668	1	4970	4970		47.657	4.7931	1	1657500			59370	10853	39668	39684	67346	67346					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7687683105469	2	470.769783	939.525013	-0.85112	-0.00040068	-0.72759	-0.00034253	-1.5787	-0.00074321	470.7693717184576	51.01	1.4748	51.018	50.607	52.082	0.0077438					99	42	3	0	0	0	0.58668	1	4379	4379		47.657	5.1829	1	770790			59371	10853	39668	39684	67347	67347					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7689208984375	2	470.769783	939.525013	-0.93673	-0.00044098	-0.76345	-0.00035941	-1.7002	-0.00080039	470.7692759714824	53.261	1.827	53.278	52.753	54.58	0.017487					126	54	3	0	0	0	0.19818	3	4662	4662;4690;4702		74.255	6.7614	1	1396300			59372	10853	39668	39684	67348;67349;67350	67348					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.76904296875	2	470.769783	939.525013	-1.0178	-0.00047915	-1.0022	-0.0004718	-2.02	-0.00095095	470.76917023022514	52.88	1.7114	52.92	52.466	54.177	0.040592					117	56	3	0	0	0	0.41566	2	4336	4336;4409		56.721	7.2795	1	1648400			59373	10853	39668	39684	67351;67352	67351					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.76922607421875	2	470.769783	939.525013	-1.0146	-0.00047764	-0.29264	-0.00013777	-1.3072	-0.0006154	470.7694800096645	54.93	1.6163	54.986	54.192	55.809	0.055611					122	53	3	0	0	0	0.44421	2	4561	4561;4588		54.776	8.8041	1	2574100			59374	10853	39668	39684	67353;67354	67353					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7693786621094	2	470.769783	939.525013	0.3235	0.00015229	-1.7498	-0.00082374	-1.4263	-0.00067145	470.7688399761902	50.705	1.3688	50.755	50.372	51.741	0.049896					94	42	3	0	0	0	0.71772	1	4051	4051		39.253	6.4404	1	1304900			59375	10853	39668	39684	67355	67355					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7689208984375	2	470.769783	939.525013	0.34379	0.00016185	-2.4863	-0.0011705	-2.1425	-0.0010086	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.55097	2	4366	4366;4379		49.442	17.912	1	1863100			59376	10853	39668	39684	67356;67357	67356					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7694091796875	2	470.769783	939.525013	0.35975	0.00016936	-1.6807	-0.00079124	-1.321	-0.00062187	470.76882384290565	54.831	1.8402	54.923	54.179	56.019	0.091167					116	54	3	0	0	0	0.41566	3	4578	4559;4568;4578		56.721	17.468	1	2565300			59377	10853	39668	39684	67358;67359;67360	67360					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7690124511719	2	470.769783	939.525013	-0.38802	-0.00018267	-0.92797	-0.00043686	-1.316	-0.00061953	470.76920559370467	50.764	1.147	50.672	50.317	51.464	-0.091797					76	32	3	0	0	0	0.30689	1	3996	3996		64.207	19.83	1	1480000			59378	10853	39668	39684	67361	67361					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.76910400390625	2	470.769783	939.525013	-0.46989	-0.00022121	-1.5944	-0.00075061	-2.0643	-0.00097182	470.768898093518	52.94	1.6168	52.866	52.471	54.088	-0.074509					101	42	3	0	0	0	0.51592	4	4296	4275;4296;4304;4379		51.193	9.8458	1	1875900			59379	10853	39668	39684	67362;67363;67364;67365	67363					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7690124511719	2	470.769783	939.525013	-0.5306	-0.00024979	-0.82903	-0.00039028	-1.3596	-0.00064007	470.76924692266675	54.862	1.6397	54.812	54.113	55.753	-0.049274					122	51	3	0	0	0	0.6204	1	4524	4524		45.972	6.7194	1	2604200			59380	10853	39668	39684	67366	67366					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7690124511719	2	470.769783	939.525013	-0.63024	-0.0002967	-1.6901	-0.00079565	-2.3203	-0.0010924	470.76900608470595	48.857	1.2932	49.317	48.985	50.278	0.45983					73	31	4	0	0	0	0.77244	1	4764	4764		32.812	4.5581	1	21584000			59381	10853	39668	39684	67367	67367					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7690124511719	2	470.769783	939.525013	-0.0079822	-3.7578E-06	-1.8362	-0.00086443	-1.8442	-0.00086819	470.7688392361173	51.36	0.75376	51.795	51.534	52.288	0.43505					46	17	4	0	0	0	0.6204	1	5094	5094		45.972	3.4978	1	3116800			59382	10853	39668	39684	67368	67368					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.769775390625	2	470.769783	939.525013	-0.26642	-0.00012542	-1.5501	-0.00072973	-1.8165	-0.00085516	470.76897416042203	52.548	1.7695	52.972	52.234	54.003	0.42348					108	42	4	0	0	0	0.78124	1	5323	5323		30.318	0	1	18288000			59383	10853	39668	39684	67369	67369					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76898193359375	2	470.769783	939.525013	-0.23699	-0.00011157	-1.3396	-0.00063064	-1.5766	-0.00074221	470.7690852138792	80.179	2.0778	80.595	78.892	80.97	0.41621					101	48	4	0	0	0	0.51592	1	9149	9149		51.193	3.5354	1	1333300			59384	10853	39668	39684	67370	67370					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.768798828125	2	470.769783	939.525013	0.24256	0.00011419	-1.7466	-0.00082224	-1.504	-0.00070805	470.7687464868604	50.117	1.1073	50.962	50.641	51.748	0.84501					94	26	5	0	0	0	0.6204	2	4927	4927;5011		45.972	3.5761	1	10800000			59385	10853	39668	39684	67371;67372	67371					0.052831252231385406
TSGRPRAVP	9	Unmodified	_TSGRPRAVP_					0	0	0		ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	ENST00000378024.8_2_11:62301428-62301479:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7691955566406	2	470.769783	939.525013	-0.65478	-0.00030825	-0.88303	-0.00041571	-1.5378	-0.00072396	470.7692226833795	80.078	1.5697	80.605	79.423	80.992	0.52676					81	36	3	0	0	0	0.41566	1	9217	9217		56.721	12.344	1	1102700			59386	10853	39668	39684	67373	67373					0.052831252231385406
TSGSTVKEK	9	Unmodified	_TSGSTVKEK_					0	0	0			REV__ENSG00000171560|ENST00000403106|FGA	REV__ENSG00000171560|ENST00000403106|FGA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.7548828125	2	468.753464	935.492375	-0.31111	-0.00014583	2.0372	0.00095496	1.7261	0.00080913	468.75440753286836	21.774	0.64083	21.709	21.493	22.134	-0.064743					31	20	2	0	0	0	0.77244	1	647	647		32.812	4.9302	1	48957	+		59387	21748	39669	39685	67374	67374					0.022048733096198703
TSGSTVKEK	9	Unmodified	_TSGSTVKEK_					0	0	0			REV__ENSG00000171560|ENST00000403106|FGA	REV__ENSG00000171560|ENST00000403106|FGA	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	468.753464	935.492375	0.057167	2.6797E-05	3.2816	0.0015383	3.3388	0.0015651	468.75397587296493	21.494	0.2668	21.576	21.435	21.702	0.081615	-0.086656	0.0012805	NaN	32.812	15	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42896	+		59388	21748	39669	39685							0.022048733096198703
TSGSTVKEK	9	Unmodified	_TSGSTVKEK_					0	0	0			REV__ENSG00000171560|ENST00000403106|FGA	REV__ENSG00000171560|ENST00000403106|FGA	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	468.753464	935.492375	0.64628	0.00030294	1.2129	0.00056856	1.8592	0.00087151	468.75405185633105	21.669	0.33167	21.652	21.425	21.756	-0.016428	-0.010088	-0.00065888	NaN	32.812	18	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53478	+		59389	21748	39669	39685							0.022048733096198703
TSHKTVYVQ	9	Unmodified	_TSHKTVYVQ_					0	0	0			REV__ENSG00000183783|ENST00000360029|KCTD8	REV__ENSG00000183783|ENST00000360029|KCTD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.7822875976562	2	531.782556	1061.55056	-0.45981	-0.00024452	0.04954	2.6344E-05	-0.41027	-0.00021817	531.7825831037422	29.277	2.7619	29.248	28.206	30.968	-0.029207					186	63	5	0	0	0	0.41566	1	1875	1875		56.721	1.9447	1	10622000	+		59390	22628	39670	39686	67375	67375					0.022245549548870258
TSILLLLSP	9	Unmodified	_TSILLLLSP_					0	0	0		ENST00000424679.6_1_19:58694606-58694702:+|nuORF	ENST00000424679.6_1_19:58694606-58694702:+|nuORF	ENST00000424679.6_1_19:58694606-58694702:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.805419921875	2	478.804968	955.595384	0.22693	0.00010865	2.6093	0.0012493	2.8362	0.001358	478.8061448766097	39.22	1.8064	39.308	38.205	40.011	0.088375					88	52	2	0	0	0	0.7932	1	2387	2387		23.042	1.0826	1	295310			59391	11519	39671	39687	67376	67376					0.11580985768239316
TSIPLMRGG	9	Unmodified	_TSIPLMRGG_					0	0	0			REV__ENST00000361170.6_1_1:156536318-156539228:-|nuORF	REV__ENST00000361170.6_1_1:156536318-156539228:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2541809082031	2	466.25512	930.495686	-1.4812	-0.00069062	-0.75102	-0.00035017	-2.2322	-0.0010408	466.2546647596287	63.114	1.6104	63.114	62.32	63.93	0					124	75	2	0	0	0	0.76255	1	5522	5522		35.618	2.1027	1	225480	+		59392	25492	39672	39688	67377	67377					0.027658448826400672
TSIPTFEL	8	Unmodified	_TSIPTFEL_					0	0	0		ENSG00000135617|ENST00000258083|PRADC1	ENSG00000135617|ENST00000258083|PRADC1	ENSG00000135617|ENST00000258083|PRADC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	454.24224853515625	2	454.242201	906.469849	-1.5907	-0.00072257	1.8874	0.00085735	0.29673	0.00013479	454.2428961536622	82.982	1.1143	83.108	82.747	83.862	0.12601					33	25	2	0	0	0	0.92973	1	7963	7963		50.025	0	1	218330			59393	4037	39673	39689	67378	67378					0.012872739120098231
TSIQKARKVY	10	Unmodified	_TSIQKARKVY_					0	0	0		ENST00000557380.5_1_14:50292586-50301128:-|nuORF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF;nc|ENSG00000165525|O60524-3|NEMF;ENSG00000165525|ENST00000298310|NEMF;ENST00000556925.5_1_14:50285084-50295410:-|nuORF	ENST00000557380.5_1_14:50292586-50301128:-|nuORF	ENST00000557380.5_1_14:50292586-50301128:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.858154296875	2	597.35368	1192.69281	1.5032	0.00089792	2.5027	0.001495	4.0059	0.0023929	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.8651	1	10890	10890		25.574	0	1	1501500			59394	6091	39674	39690	67379	67379					0.10416767697097384
TSISSQPIVI	10	Unmodified	_TSISSQPIVI_					0	0	0			REV__nc|ENSG00000129003|Q709C8-4|VPS13C	REV__nc|ENSG00000129003|Q709C8-4|VPS13C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7998046875	2	522.800414	1043.58628	-0.36541	-0.00019103	-0.066213	-3.4616E-05	-0.43162	-0.00022565	522.8002684990488	59.941	0.79124	60.332	59.932	60.723	0.39077					42	20	3	0	0	0	0.47091	1	6314	6314		58.23	8.6939	1	774970	+		59395	18801	39675	39691	67380	67380					0.06622592411895312
TSIVMDHET	9	Unmodified	_TSIVMDHET_					0	0	0			REV__nc|ENSG00000159140|P18583-6|SON	REV__nc|ENSG00000159140|P18583-6|SON	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7352905273438	2	516.736957	1031.45936	-0.72825	-0.00037632	-4.4865	-0.0023183	-5.2147	-0.0026946	516.7345563584511	43.524	0.55219	43.488	43.276	43.828	-0.035816					26	12	3	0	0	0	0.78058	1	3434	3434		30.504	5.9844	1	194890	+		59396	20639	39676	39692	67381	67381					-0.055110768047370584
TSKFLSRLLGQ	11	Unmodified	_TSKFLSRLLGQ_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.24761962890625	3	417.24695	1248.71902	2.3362	0.00097477	-1.526	-0.0006367	0.81023	0.00033806	417.24614942996294	103.4	0.79668	103.62	103.17	103.96	0.22556					40	19	3	0	0	0	0.61369	1	12573	12573		37.6	17.285	1	988660	+		59397	22442	39677	39693	67382	67382					0.10461036868559859
TSKFLSRLLGQ	11	Unmodified	_TSKFLSRLLGQ_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	417.24695	1248.71902	-0.96166	-0.00040125	1.5025	0.00062692	0.54086	0.00022567	417.24743108598545	103.74	0.44981	103.74	103.43	103.88	0	-0.11869	0.001669	NaN	37.6	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	263250	+		59398	22442	39677	39693							0.10461036868559859
TSKFLSRLLGQ	11	Unmodified	_TSKFLSRLLGQ_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	417.24695	1248.71902	-0.18596	-7.7591E-05	7.2001	0.0030042	7.0142	0.0029266	417.24970359092697	104.08	0.92728	104.07	103.67	104.59	-0.0035706	0.21618	0.0088009	NaN	37.6	30	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74283	+		59399	22442	39677	39693							0.10461036868559859
TSKFLSRLLGQ	11	Unmodified	_TSKFLSRLLGQ_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	417.24695	1248.71902	2.7173	0.0011338	4.6373	0.0019349	7.3546	0.0030687	417.2484543738765	104.03	0.96568	103.99	103.6	104.57	-0.043755	0.13385	0.005593	NaN	37.6	28	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96506	+		59400	22442	39677	39693							0.10461036868559859
TSKFLSRLLGQ	11	Unmodified	_TSKFLSRLLGQ_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	417.24695	1248.71902	3.1799	0.0013268	3.6671	0.0015301	6.847	0.0028569	417.2480204906039	103.94	0.84048	103.98	103.71	104.55	0.041481	0.1244	0.0043785	NaN	37.6	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99375	+		59401	22442	39677	39693							0.10461036868559859
TSKFLSRLLGQ	11	Unmodified	_TSKFLSRLLGQ_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	417.24695	1248.71902	-1.776	-0.00074103	10.252	0.0042777	8.4763	0.0035367	417.25063667808695	103.98	0.77196	104.16	103.69	104.46	0.17096	0.29921	0.012621	NaN	37.6	30	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92668	+		59402	22442	39677	39693							0.10461036868559859
TSKFLSRLLGQ	11	Unmodified	_TSKFLSRLLGQ_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	417.24695	1248.71902	-1.8971	-0.00079158	1.9648	0.00081981	0.067669	2.8235E-05	417.2477754148195	103.52	0.35124	103.64	103.5	103.85	0.11495	-0.21763	0.0022477	NaN	37.6	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111790	+		59403	22442	39677	39693							0.10461036868559859
TSKLPNDL	8	Unmodified	_TSKLPNDL_					0	0	0		nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;ENSG00000073921|ENST00000393346|PICALM	nc|ENSG00000073921|Q13492-4|PICALM	nc|ENSG00000073921|Q13492-4|PICALM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	444.2451171875	2	444.245275	886.475997	1.4251	0.00063311	-0.56167	-0.00024952	0.86348	0.0003836	444.24485409277173	107.1	1.0795	107.21	106.82	107.9	0.10396					105	39	3	0	0	0	0.90983	1	13059	13059		42.396	0	1	6005700			59404	1302	39678	39694	67383	67383					0.028217921435157223
TSKMLVLRFL	10	Unmodified	_TSKMLVLRFL_					0	0	0		ENSG00000254585|ENST00000650528|MAGEL2	ENSG00000254585|ENST00000650528|MAGEL2	ENSG00000254585|ENST00000650528|MAGEL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3670043945312	2	604.365201	1206.71585	-1.2751	-0.00077064	4.1148	0.0024869	2.8397	0.0017162	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.8505	2	12110	12110;12159		19.104	1.7386	1	3346600			59405	8877	39679	39695	67384;67385	67384					0.12076070490184065
TSKPNKTNQ	9	Unmodified	_TSKPNKTNQ_					0	0	0			REV__nc|ENSG00000075292|Q14966-3|ZNF638	REV__nc|ENSG00000075292|Q14966-3|ZNF638	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.2695617675781	2	509.269813	1016.52507	0.63258	0.00032215	-0.75364	-0.00038381	-0.12106	-6.1652E-05	509.2693105940911	17.08	0.75059	16.598	16.241	16.991	-0.48256					34	16	3	0	0	0	0.28163	1	215	215		66.429	9.7082	1	540950	+		59406	16707	39680	39696	67386	67386					0.017470804324602796
TSKRTVLLTG	10	Unmodified	_TSKRTVLLTG_					0	0	0		ENSG00000123609|ENST00000243346|NMI	ENSG00000123609|ENST00000243346|NMI	ENSG00000123609|ENST00000243346|NMI	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3269653320312	2	538.327131	1074.63971	-1.4902	-0.00080221	1.6152	0.00086949	0.12497	6.7277E-05	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.85251	1	12713	12713		19.997	1.7347	1	4041000			59407	3285	39681	39697	67387	67387					0.10537389914406958
TSLAPIIVYV	10	Unmodified	_TSLAPIIVYV_					0	0	0		nc|ENSG00000165995|Q08289-6|CACNB2;nc|ENSG00000165995|Q08289-10|CACNB2;nc|ENSG00000165995|Q08289-2|CACNB2;nc|ENSG00000165995|Q08289-3|CACNB2;nc|ENSG00000165995|Q08289-9|CACNB2;nc|ENSG00000165995|Q08289-5|CACNB2;nc|ENSG00000165995|Q08289-7|CACNB2;nc|ENSG00000165995|Q08289-4|CACNB2;nc|ENSG00000165995|Q08289-8|CACNB2;ENSG00000165995|ENST00000324631|CACNB2	nc|ENSG00000165995|Q08289-6|CACNB2	nc|ENSG00000165995|Q08289-6|CACNB2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3272705078125	2	538.323525	1074.6325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.61	1	117.58	117.08	118.08	-0.02433								0	0	0	0.45132	1	13021	13021		31.955	6.5047	1				59408	6145	39682	39698	67388	67388					0.09816657313990618
TSLHKLRKAIE	11	Unmodified	_TSLHKLRKAIE_					0	0	0		nc|ENSG00000114859|P51788-5|CLCN2	nc|ENSG00000114859|P51788-5|CLCN2	nc|ENSG00000114859|P51788-5|CLCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3938598632812	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.77421	1	12737	12737		16.717	0	1	2297700			59409	14856	39683	39699	67389	67389					0.13652414651232903
TSLILPGLV	9	Unmodified	_TSLILPGLV_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79296875	2	456.791861	911.569169	-1.09	-0.00049788	3.7703	0.0017222	2.6803	0.0012244	456.7935086768371	36.547	3.494	36.558	33.881	37.375	0.011173					215	79	5	0	0	0	0.5393	1	2454	2454		50.025	4.0726	1	4477500			59410	7373	39684	39700	67390	67390					0.10984716596749422
TSLILPGLV	9	Unmodified	_TSLILPGLV_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7930603027344	2	456.791861	911.569169	-0.077665	-3.5477E-05	3.236	0.0014782	3.1584	0.0014427	456.79322700683537	35.356	1.7647	35.603	35.091	36.856	0.24769					159	44	4	0	0	0	0.76996	1	2758	2758		33.516	3.0119	1	6766600			59411	7373	39684	39700	67391	67391					0.10984716596749422
TSLILPGLV	9	Unmodified	_TSLILPGLV_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79327392578125	2	456.791861	911.569169	1.3225	0.00060413	1.789	0.00081719	3.1115	0.0014213	456.79255750887523	35.219	1.7546	35.6	35.098	36.853	0.3812					157	44	4	0	0	0	0.67235	1	2799	2799		42.474	1.9018	1	7423700			59412	7373	39684	39700	67392	67392					0.10984716596749422
TSLILPGLV	9	Unmodified	_TSLILPGLV_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7929382324219	2	456.791861	911.569169	0.14837	6.7774E-05	2.6615	0.0012157	2.8099	0.0012835	456.79297860960025	37.636	1.5872	38.122	37.704	39.291	0.48581					149	39	5	0	0	0	0.69914	2	3045	3045;3070		40.573	3.4135	1	8942200			59413	7373	39684	39700	67393;67394	67393					0.10984716596749422
TSLLIIPPE	9	Unmodified	_TSLLIIPPE_					0	0	0		ENST00000396009.7_1_20:50140121-50140241:-|nuORF	ENST00000396009.7_1_20:50140121-50140241:-|nuORF	ENST00000396009.7_1_20:50140121-50140241:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958679199219	2	491.794601	981.574648	-0.71316	-0.00035073	3.1449	0.0015467	2.4318	0.0011959	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.7932	1	3848	3848		23.042	2.5607	1	1219600			59414	11104	39685	39701	67395	67395					0.08312395388566074
TSLLKNKNN	9	Unmodified	_TSLLKNKNN_					0	0	0			REV__chr9:34093448-34098324|15|10.47|0.49|4.43|-|0|DCAF12,DCAF12|1	REV__chr9:34093448-34098324|15|10.47|0.49|4.43|-|0|DCAF12,DCAF12|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3142700195312	2	516.29583	1030.57711	2.8696	0.0014815	-2.31	-0.0011926	0.55956	0.0002889	516.2947845249417	100.28	0.17748	100.23	100.13	100.31	-0.052109					6	3	2	0	0	0	0.20789	1	10888	10888		35.618	0.46626	1	35376	+		59415	15935	39686	39702	67396	67396					0.06304243846238933
TSLLSQKKKL	10	Unmodified	_TSLLSQKKKL_					0	0	0		ENSG00000144821|ENST00000693548|MYH15;chr3:108463243-108464638|24|12.12|0.35|5.13|-|ENST00000273353|MYH15,MYH15;chr3:108460367-108463111|24|13.12|0.34|5.28|-|ENST00000273353|MYH15,MYH15;chr3:108399267-108405338|25|24.6|0.84|4.86|-|ENST00000273353|MYH15,MYH15	ENSG00000144821|ENST00000693548|MYH15	ENSG00000144821|ENST00000693548|MYH15	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	573.373779296875	2	573.366256	1144.71796	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.146	1	52.206	51.706	52.706	0.059719								0	0	0	0.45132	1	4190	4190		23.523	0	1				59416	383	39687	39703	67397	67397					0.15138822499648086
TSLLTMILTL	10	Unmodified	_TSLLTMILTL_					0	0	0		ENST00000513573.1_1_5:20305944-20331508:+|nuORF	ENST00000513573.1_1_5:20305944-20331508:+|nuORF	ENST00000513573.1_1_5:20305944-20331508:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3321533203125	2	553.330493	1104.64643	-0.52136	-0.00028848	4.1344	0.0022877	3.613	0.0019992	553.332591151156	97.213	2.3391	97.213	96.637	98.976	0					148	55	5	0	0	0	0.86471	1	9761	9761		30.318	2.4355	1	2365500			59417	13054	39688	39704	67398	67398					0.09829566750795493
TSLLTMILTL	10	Unmodified	_TSLLTMILTL_					0	0	0		ENST00000513573.1_1_5:20305944-20331508:+|nuORF	ENST00000513573.1_1_5:20305944-20331508:+|nuORF	ENST00000513573.1_1_5:20305944-20331508:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3323364257812	2	553.330493	1104.64643	1.2853	0.00071117	2.1232	0.0011748	3.4085	0.001886	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.86348	1	10276	10276		31.53	3.6476	1	4524400			59418	13054	39688	39704	67399	67399					0.09829566750795493
TSLLTMILTL	10	Unmodified	_TSLLTMILTL_					0	0	0		ENST00000513573.1_1_5:20305944-20331508:+|nuORF	ENST00000513573.1_1_5:20305944-20331508:+|nuORF	ENST00000513573.1_1_5:20305944-20331508:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3320922851562	2	553.330493	1104.64643	1.115	0.00061697	2.4083	0.0013326	3.5233	0.0019496	553.3316729497465	96.557	1.6944	96.962	96.464	98.158	0.40498					120	40	4	0	0	0	0.86348	1	11615	11615		31.53	2.3803	1	3081200			59419	13054	39688	39704	67400	67400					0.09829566750795493
TSLLTMILTL	10	Unmodified	_TSLLTMILTL_					0	0	0		ENST00000513573.1_1_5:20305944-20331508:+|nuORF	ENST00000513573.1_1_5:20305944-20331508:+|nuORF	ENST00000513573.1_1_5:20305944-20331508:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.3327026367188	2	553.330493	1104.64643	0.80707	0.00044658	2.7255	0.0015081	3.5326	0.0019547	553.3318451739801	96.663	1.8533	97.067	96.582	98.436	0.40451					128	44	4	0	0	0	0.86471	1	11646	11646		30.318	3.2704	1	3116400			59420	13054	39688	39704	67401	67401					0.09829566750795493
TSLLVPILT	9	Unmodified	_TSLLVPILT_					0	0	0			REV__ENST00000255631.9_1_19:55773740-55773947:-|nuORF	REV__ENST00000255631.9_1_19:55773740-55773947:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8059387207031	2	478.804968	955.595384	-0.91897	-0.00044001	3.0146	0.0014434	2.0957	0.0010034	478.8062344602325	41.651	1.2493	41.655	41.077	42.326	0.0044022					74	33	3	0	0	0	0.76764	1	2719	2719		34.173	2.2177	1	258200	+		59421	24320	39689	39705	67402	67402					0.11580985768216578
TSLLWTDL	8	Unmodified	_TSLLWTDL_					0	0	0		ENST00000448120.6_1_12:3049550-3049889:+|nuORF;nc|ENSG00000078246|O75386-2|TULP3	ENST00000448120.6_1_12:3049550-3049889:+|nuORF	ENST00000448120.6_1_12:3049550-3049889:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.7572937011719	2	474.755475	947.496398	1.6634	0.00078972	2.2421	0.0010645	3.9056	0.0018542	474.7563413437398	96.023	1.0787	96.444	95.948	97.027	0.42051					59	25	3	0	0	0	0.47906	1	11510	11510		76.847	8.3619	1	675520			59422	11854	39690	39706	67403	67403					0.02054962803322269
TSLLWWLL	8	Unmodified	_TSLLWWLL_					0	0	0			REV__nc|ENSG00000150967|Q9NP78-3|ABCB9	REV__nc|ENSG00000150967|Q9NP78-3|ABCB9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.314208984375	2	516.299853	1030.58515	1.795	0.00092675	-3.3859	-0.0017482	-1.5909	-0.0008214	516.2985567147707	99.007	0.42462	99.37	99.251	99.676	0.36292					13	10	2	0	0	0	0.4196	1	12024	12024		19.36	0	1	159480	+		59423	20226	39691	39707	67404	67404					0.07108422833653094
TSLRDRVQEL	10	Unmodified	_TSLRDRVQEL_					0	0	0		ENSG00000120262|ENST00000239374|CCDC170	ENSG00000120262|ENST00000239374|CCDC170	ENSG00000120262|ENST00000239374|CCDC170	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.8390502929688	2	608.835851	1215.65715	0.091472	5.5692E-05	1.9719	0.0012006	2.0634	0.0012563	608.8369851284349	111.39	0.74226	111.42	111.27	112.01	0.030388					66	28	3	0	0	0	0.86698	1	12200	12200		28.081	2.5074	1	73763			59424	3121	39692	39708	67405	67405					0.05794685449427561
TSLTKKTQ	8	Unmodified	_TSLTKKTQ_					0	0	0		nc|ENSG00000112200|Q9Y4E5-4|ZNF451	nc|ENSG00000112200|Q9Y4E5-4|ZNF451	nc|ENSG00000112200|Q9Y4E5-4|ZNF451	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.76611328125	2	453.766374	905.518196	-0.68019	-0.00030865	-0.50473	-0.00022903	-1.1849	-0.00053768	453.76595867502624	41.947	1.3916	41.95	41.419	42.811	0.0034142					70	33	3	0	0	0	0.91472	1	3201	3201		44.117	5.3107	1	213660			59425	14850	39693	39709	67406	67406					0.0616576755190863
TSLTKKTQ	8	Unmodified	_TSLTKKTQ_					0	0	0		nc|ENSG00000112200|Q9Y4E5-4|ZNF451	nc|ENSG00000112200|Q9Y4E5-4|ZNF451	nc|ENSG00000112200|Q9Y4E5-4|ZNF451	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	453.76690673828125	2	453.766374	905.518196	-0.49151	-0.00022303	-0.9352	-0.00042436	-1.4267	-0.0006474	453.7658677521356	42.903	1.3631	42.903	42.535	43.898	0.00016785					59	32	2	0	0	0	0.87064	1	3212	3212		29.15	0	1	263700			59426	14850	39693	39709	67407	67407					0.0616576755190863
TSLTKKTQ	8	Unmodified	_TSLTKKTQ_					0	0	0		nc|ENSG00000112200|Q9Y4E5-4|ZNF451	nc|ENSG00000112200|Q9Y4E5-4|ZNF451	nc|ENSG00000112200|Q9Y4E5-4|ZNF451	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.7662048339844	2	453.766374	905.518196	0.22799	0.00010345	-1.2674	-0.00057509	-1.0394	-0.00047164	453.76577882768925	41.923	1.745	41.996	41.584	43.329	0.073414					97	46	4	0	0	0	0.8621	1	2774	2774		26.693	1.1189	1	672610			59427	14850	39693	39709	67408	67408					0.0616576755190863
TSLTKKTQ	8	Unmodified	_TSLTKKTQ_					0	0	0		nc|ENSG00000112200|Q9Y4E5-4|ZNF451	nc|ENSG00000112200|Q9Y4E5-4|ZNF451	nc|ENSG00000112200|Q9Y4E5-4|ZNF451	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.76629638671875	2	453.766374	905.518196	-0.080965	-3.6739E-05	-0.40477	-0.00018367	-0.48573	-0.00022041	453.76626844051486	71.556	0.82278	72.106	71.742	72.565	0.55009					66	19	5	0	0	0	0.88601	1	7990	7990		34.173	0.65696	1	758660			59428	14850	39693	39709	67409	67409					0.0616576755190863
TSLVIPLIG	9	Unmodified	_TSLVIPLIG_					0	0	0		ENSG00000101204|ENST00000370263|CHRNA4;nc|ENSG00000101204|P43681-2|CHRNA4;nc|ENSG00000120903|Q15822-2|CHRNA2;ENSG00000120903|ENST00000407991|CHRNA2;nc|ENSG00000080644|P32297-3|CHRNA3;nc|ENSG00000080644|P32297-1|CHRNA3;ENSG00000080644|ENST00000326828|CHRNA3	ENSG00000101204|ENST00000370263|CHRNA4	ENSG00000101204|ENST00000370263|CHRNA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7932434082031	2	456.791861	911.569169	-0.0055701	-2.5444E-06	2.9863	0.0013641	2.9807	0.0013616	456.7931079883192	38.776	1.3461	38.723	38.257	39.603	-0.052731					134	39	4	0	0	0	0.72402	1	2351	2351		38.806	1.647	1	1653300			59429	1913	39694	39710	67410	67410					0.1098471659677216
TSLVPLVLS	9	Unmodified	_TSLVPLVLS_					0	0	0		ENST00000274311.2_1_5:52096140-52096299:+|nuORF	ENST00000274311.2_1_5:52096140-52096299:+|nuORF	ENST00000274311.2_1_5:52096140-52096299:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7901306152344	2	464.789318	927.564084	-1.1356	-0.00052781	3.8995	0.0018125	2.764	0.0012847	464.7910242247121	36.975	1.5496	36.999	36.145	37.695	0.023624					81	41	3	0	0	0	0.78536	1	2008	2008		29.15	7.1897	1	297830			59430	9587	39695	39711	67411	67411					0.09740412734140591
TSMISSADPG	10	Unmodified	_TSMISSADPG_					0	0	0			REV__nc|ENSG00000185664|P40967-3|PMEL	REV__nc|ENSG00000185664|P40967-3|PMEL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.2181396484375	2	483.215857	964.417161	1.5048	0.00072714	3.4194	0.0016523	4.9242	0.0023794	483.2173493133452	92.876	1.1325	93.323	92.904	94.037	0.44662					63	26	3	0	0	0	0.64457	1	11082	11082		47.657	3.1263	1	748980	+		59431	22784	39696	39712	67412	67412					-0.06647052213122606
TSNFIIGMGF	10	Unmodified	_TSNFIIGMGF_					0	0	0		ENSG00000181856|ENST00000317370|SLC2A4;ENST00000572485.5_1_17:7188262-7189945:+|nuORF	ENSG00000181856|ENST00000317370|SLC2A4	ENSG00000181856|ENST00000317370|SLC2A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	543.7685546875	2	543.76806	1085.52157	0.92776	0.00050449	3.3643	0.0018294	4.2921	0.0023339	543.7698352004945	22.722	0.43309	22.672	22.403	22.836	-0.050077					24	17	2	0	0	0	0.86589	1	701	701		29.15	1.2673	1	39420			59432	7410	39697	39713	67413	67413					-0.01777305665723361
TSNHVQHVSLQ	11	Unmodified	_TSNHVQHVSLQ_					0	0	0			REV__ENSG00000116183|ENST00000367662|PAPPA2	REV__ENSG00000116183|ENST00000367662|PAPPA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	625.3196411132812	2	625.317825	1248.6211	-0.37651	-0.00023544	3.6917	0.0023085	3.3151	0.002073	625.3199036039578	64.522	1.0153	64.56	64.22	65.236	0.037849					73	33	3	0	0	0	0.48313	1	5683	5683		53.089	1.8963	1	320220	+		59433	18186	39698	39714	67414	67414					0.006732282725806726
TSNLLITFLK	10	Unmodified	_TSNLLITFLK_					0	0	0		ENSG00000120029|ENST00000370033|ARMH3	ENSG00000120029|ENST00000370033|ARMH3	ENSG00000120029|ENST00000370033|ARMH3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.3450317382812	2	575.347532	1148.68051	-0.3799	-0.00021857	-2.6981	-0.0015524	-3.078	-0.0017709	575.3459117588899	98.957	2.3582	98.957	98.457	100.82	0					160	56	5	0	0	0	0.86763	1	9932	9932		26.693	1.1189	1	2637800			59434	3109	39699	39715	67415	67415					0.1121173123403878
TSPEKKETIK	10	Unmodified	_TSPEKKETIK_					0	0	0		ENSG00000102802|ENST00000380482|MEDAG	ENSG00000102802|ENST00000380482|MEDAG	ENSG00000102802|ENST00000380482|MEDAG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8325805664062	2	580.829703	1159.64485	-1.0916	-0.00063402	2.1904	0.0012723	1.0989	0.00063826	580.8307679449848	59.536	0.88874	60.089	59.574	60.463	0.55323					49	22	3	0	0	0	0.42897	1	6311	6311		61.691	10.164	1	1358100			59435	2020	39700	39716	67416	67416					0.07141648986385007
TSPELWGFG	9	Unmodified	_TSPELWGFG_					0	0	0			REV__ENST00000380834.6_1_2:25042774-25043173:+|nuORF	REV__ENST00000380834.6_1_2:25042774-25043173:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.2335510253906	2	497.23745	992.460347	-0.66755	-0.00033193	-3.2968	-0.0016393	-3.9643	-0.0019712	497.2356873508865	30.476	0.61685	30.539	30.265	30.882	0.063122					59	31	3	0	0	0	0.69914	1	1341	1341		40.573	4.9543	1	167320	+		59436	25956	39701	39717	67417	67417					-0.03618494373517933
TSPGVPRAR	9	Unmodified	_TSPGVPRAR_					0	0	0		ENST00000480033.2_1_1:27885247-27930860:-|nuORF	ENST00000480033.2_1_1:27885247-27930860:-|nuORF	ENST00000480033.2_1_1:27885247-27930860:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7691345214844	2	470.769783	939.525013	-0.93673	-0.00044098	-0.76345	-0.00035941	-1.7002	-0.00080039	470.7692759714824	53.261	1.827	53.278	52.753	54.58	0.017487					126	54	3	0	0	0	0.55097	1	4653	4653		49.442	3.4693	1	1396300			59437	12426	39702	39718	67418	67418					0.052831252231385406
TSPIKFVF	8	Unmodified	_TSPIKFVF_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.7717590332031	2	469.770929	937.527304	0.020408	9.5871E-06	1.0054	0.00047231	1.0258	0.0004819	469.7710438712153	39.299	0.48149	39.246	38.936	39.418	-0.052731					25	13	2	0	0	0	0.84341	1	2394	2394		24.203	2.5004	1	147340	+		59438	21140	39703	39719	67419	67419					0.05604160908239919
TSPKPPLFLP	10	Unmodified	_TSPKPPLFLP_					0	0	0			REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.8496704101562	2	548.823692	1095.63283	-2.6205	-0.0014382	-3.659	-0.0020081	-6.2795	-0.0034463	548.8202760515363	41.911	1.7323	42.325	41.543	43.275	0.4139					85	44	3	0	0	0	0.37624	1	3712	3712		35.618	10.044	1	979660	+		59439	30068	39704	39720	67420	67420					0.0888407703384928
TSPRPVAGR	9	Unmodified	_TSPRPVAGR_					0	0	0			REV__ENST00000292377.3_1_7:99774686-99774926:-|nuORF	REV__ENST00000292377.3_1_7:99774686-99774926:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7695617675781	2	470.769783	939.525013	-1.6002	-0.00075333	-0.071841	-3.3821E-05	-1.6721	-0.00078715	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.64555	1	4487	4487		44.377	3.599	1	1490800	+		59440	24675	39705	39721	67421	67421					0.052831252231385406
TSPRSRTLTT	10	Unmodified	_TSPRSRTLTT_					0	0	0		ENST00000372480.1_1_9:132396519-132396564:+|nuORF	ENST00000372480.1_1_9:132396519-132396564:+|nuORF	ENST00000372480.1_1_9:132396519-132396564:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3400268554688	2	560.309469	1118.60439	1.3835	0.00077516	2.1529	0.0012063	3.5363	0.0019814	560.3098137993783	102.03	0.17068	102.08	101.93	102.1	0.044823					5	3	2	0	0	0	0.37624	1	11000	11000		29.17	3.596	1	226280			59441	10702	39706	39722	67422	67422					0.04982727386618535
TSPSRPSH	8	Unmodified	_TSPSRPSH_					0	0	0		ENST00000463750.5_1_12:1025794-1039020:-|nuORF;ENST00000461568.5_1_12:1025523-1036092:-|nuORF;ENST00000488642.6_1_12:1023254-1036092:-|nuORF;ENST00000228345.9_1_12:1022559-1036092:-|nuORF;ENSG00000002016|ENST00000358495|RAD52	ENST00000463750.5_1_12:1025794-1039020:-|nuORF	ENST00000463750.5_1_12:1025794-1039020:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.300048828125	2	434.717216	867.419879	1.174	0.00051037	2.1848	0.00094976	3.3588	0.0014601	434.71659366658355	72.1	0.16566	72.141	72.035	72.201	0.040222					8	6	2	0	0	0	0.4196	1	6927	6927		18.324	0	1	31346			59442	652	39707	39723	67423	67423					-0.01913415973285737
TSPSRRPI	8	Unmodified	_TSPSRRPI_					0	0	0		nc|ENSG00000128591|Q14315-2|FLNC;ENSG00000128591|ENST00000325888|FLNC	nc|ENSG00000128591|Q14315-2|FLNC	nc|ENSG00000128591|Q14315-2|FLNC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7930603027344	2	457.264333	912.514114	-1.1699	-0.00053496	1.8233	0.00083371	0.65333	0.00029875	457.26505187368645	36.794	0.66988	36.805	36.436	37.106	0.011173					22	14	2	0	0	0	0.4196	1	2418	2418		42.396	11.892	1	62083			59443	3549	39708	39724	67424	67424					0.054357228488470355
TSQLSSFAH	9	Unmodified	_TSQLSSFAH_					0	0	0			REV__ENST00000446001.1_1_6:13486575-13486937:+|nuORF	REV__ENST00000446001.1_1_6:13486575-13486937:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.2367858886719	2	489.237981	976.461409	-0.72549	-0.00035494	-2.4583	-0.0012027	-3.1838	-0.0015576	489.23682827265793	62.903	2.2218	63.017	62.721	64.943	0.11388					298	98	5	0	0	0	0.69624	1	5491	5491		40.778	1.972	1	3506900	+		59444	26800	39709	39725	67425	67425					-0.027762800046275515
TSQLSSFAH	9	Unmodified	_TSQLSSFAH_					0	0	0			REV__ENST00000446001.1_1_6:13486575-13486937:+|nuORF	REV__ENST00000446001.1_1_6:13486575-13486937:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.2364807128906	2	489.237981	976.461409	0.45265	0.00022146	-3.6619	-0.0017915	-3.2092	-0.0015701	489.23621768021786	62.918	2.6052	63.04	62.714	65.319	0.12252					281	107	5	0	0	0	0.76255	1	5497	5497		35.618	6.4687	1	3811100	+		59445	26800	39709	39725	67426	67426					-0.027762800046275515
TSRIRRPIAP	10	Unmodified	_TSRIRRPIAP_					0	0	0			REV__nc|ENSG00000104814|Q92918|MAP4K1	REV__nc|ENSG00000104814|Q92918|MAP4K1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	583.8585205078125	2	583.859464	1165.70437	-0.80585	-0.00047051	-0.15748	-9.1945E-05	-0.96333	-0.00056245	583.8591949944405	98.804	2.4153	98.854	98.351	100.77	0.049828					137	55	4	0	0	0	0.86471	1	10444	10444		30.318	2.4355	1	1986800	+		59446	17474	39710	39726	67427	67427					0.1281500951106409
TSRKGTMH	8	Oxidation (M)	_TSRKGTM(Oxidation (M))H_		TSRKGTM(1)H		TSRKGTM(63)H	0	0	1			REV__ENSG00000064999|ENST00000360359|ANKS1A	REV__ENSG00000064999|ENST00000360359|ANKS1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2330017089844	2	467.232176	932.449799	-0.9513	-0.00044448	3.5603	0.0016635	2.609	0.001219	467.2337078119893	69.729	1.4716	69.765	69.399	70.87	0.035614					135	74	2	0	0	0	0.79403	1	6693	6693		63.306	12.114	1	2912300	+		59447	16488	39711	39727	67428	67428		237			-0.019128002996012583
TSRLLFQRLLP	11	Unmodified	_TSRLLFQRLLP_					0	0	0		ENSG00000140323|ENST00000267889|DISP2	ENSG00000140323|ENST00000267889|DISP2	ENSG00000140323|ENST00000267889|DISP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.9435119628906	3	448.610111	1342.8085	-1.3262	-0.00059493	-0.33811	-0.00015168	-1.6643	-0.00074661	448.6097359452046	75.096	1.0894	75.184	74.756	75.846	0.087631					82	27	5	0	0	0	0.76579	1	6915	6915		18.531	3.8374	1	417120			59448	4425	39712	39728	67429	67429					0.15081291547926412
TSRLNWVI	8	Unmodified	_TSRLNWVI_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7798767089844	2	494.782359	987.550165	-0.85772	-0.00042438	-3.1278	-0.0015476	-3.9855	-0.001972	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.88601	1	8649	8649		34.173	0	1	737700			59449	5333	39713	39729	67430	67430					0.05589180025708629
TSRLNWVI	8	Unmodified	_TSRLNWVI_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7802734375	2	494.782359	987.550165	-0.60063	-0.00029718	-3.4065	-0.0016855	-4.0071	-0.0019826	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.88185	1	8497	8497		32.812	4.9302	1	707910			59450	5333	39713	39729	67431	67431					0.05589180025708629
TSRLQKILA	9	Unmodified	_TSRLQKILA_					0	0	0		nc|ENSG00000177238|Q6ZMU5-2|TRIM72;ENSG00000177238|ENST00000322122|TRIM72	nc|ENSG00000177238|Q6ZMU5-2|TRIM72	nc|ENSG00000177238|Q6ZMU5-2|TRIM72	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.3358764648438	2	515.324391	1028.63423	0.33505	0.00017266	-0.054883	-2.8283E-05	0.28016	0.00014438	515.3239331414118	18.697	0.50773	18.076	17.859	18.366	-0.62141					18	11	2	0	0	0	0.20789	1	397	397		15.642	0.77694	1	86277			59451	7131	39714	39730	67432	67432					0.12105711122626417
TSRLQKILA	9	Unmodified	_TSRLQKILA_					0	0	0		nc|ENSG00000177238|Q6ZMU5-2|TRIM72;ENSG00000177238|ENST00000322122|TRIM72	nc|ENSG00000177238|Q6ZMU5-2|TRIM72	nc|ENSG00000177238|Q6ZMU5-2|TRIM72	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	515.324391	1028.63423	0.93342	0.00048101	-1.1365	-0.00058566	-0.20308	-0.00010465	515.3234849025978	18.53	0.51444	18.053	17.796	18.311	-0.47694	-0.011201	-0.0004052	NaN	15.642	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68507			59452	7131	39714	39730							0.12105711122626417
TSRLVVPQ	8	Unmodified	_TSRLVVPQ_					0	0	0			REV__ENST00000461111.1_1_1:988956-990358:+|nuORF	REV__ENST00000461111.1_1_1:988956-990358:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7545166015625	2	450.269084	898.523616	-1.5435	-0.00069501	-1.7025	-0.00076657	-3.246	-0.0014616	450.26943501187674	81.389	0.217	81.504	81.352	81.569	0.11426					5	4	2	0	0	0	0.4196	1	7742	7742		27.882	0	1	20178	+		59453	22981	39715	39731	67433	67433					0.07029491134369437
TSRNEKIPN	9	Unmodified	_TSRNEKIPN_					0	0	0		L1M2_dup9102|chr21:15781465-15783675:+|2.176233979814302|0.1805436335784144|3.59|63.0|21|1|sense	L1M2_dup9102|chr21:15781465-15783675:+|2.176233979814302|0.1805436335784144|3.59|63.0|21|1|sense	L1M2_dup9102|chr21:15781465-15783675:+|2.176233979814302|0.1805436335784144|3.59|63.0|21|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.78076171875	2	529.783087	1057.55162	0.065511	3.4706E-05	-3.9587	-0.0020972	-3.8932	-0.0020625	529.7807903370734	52.522	1.485	53.136	52.584	54.069	0.61446					111	35	5	0	0	0	0.73802	1	5280	5280		37.812	5.8567	1	6729200			59454	14515	39716	39732	67434	67434					0.025147693238068314
TSRTRYRNRRK	11	Unmodified	_TSRTRYRNRRK_					0	0	0			REV__ENSG00000070366|ENST00000263073|SMG6	REV__ENSG00000070366|ENST00000263073|SMG6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.6227111816406	3	498.622185	1492.84472	-0.24645	-0.00012288	2.0742	0.0010343	1.8278	0.00091138	498.62308144457916	21.663	1.0696	21.599	21.115	22.184	-0.064743					82	38	3	0	0	0	0.75121	1	669	669		21.78	6.4473	1	61443	+		59455	16600	39717	39733	67435	67435					0.11801561497327384
TSRVLSLV	8	Unmodified	_TSRVLSLV_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.77142333984375	2	437.77146	873.528367	1.3838	0.00060578	-2.0828	-0.00091178	-0.699	-0.000306	437.7707640160911	36.426	1.7367	36.867	36.615	38.352	0.44043					140	42	4	0	0	0	0.79929	1	2971	2971		18.324	0	1	13476000	+		59456	16310	39718	39734	67436	67436					0.0865437527713766
TSSLAMKV	8	Unmodified	_TSSLAMKV_					0	0	0		ENSG00000112137|ENST00000332995|PHACTR1;nc|ENSG00000112137|Q9C0D0-2|PHACTR1	ENSG00000112137|ENST00000332995|PHACTR1	ENSG00000112137|ENST00000332995|PHACTR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.9154968261719	2	418.730946	835.447339	-0.45364	-0.00018995	-0.96056	-0.00040222	-1.4142	-0.00059217	418.7299939325024	30.883	0.48759	30.963	30.678	31.165	0.079834					14	10	2	0	0	0	0.4196	1	2036	2036		16.473	0	1	41078			59457	2633	39719	39735	67437	67437					0.023033512427332425
TSSRLVRSL	9	Unmodified	_TSSRLVRSL_					0	0	0			REV__ENST00000437629.6_2_10:88854131-88854368:+|nuORF	REV__ENST00000437629.6_2_10:88854131-88854368:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8034973144531	2	509.803823	1017.59309	-0.073626	-3.7535E-05	-0.14793	-7.5416E-05	-0.22156	-0.00011295	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.78528	1	10062	10062		29.17	2.374	1	3087300	+		59458	26712	39720	39736	67438	67438					0.08499950083148633
TSTATSKN	8	Unmodified	_TSTATSKN_					0	0	0		nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2;ENSG00000064393|ENST00000406875|HIPK2	nc|ENSG00000064393|Q9H2X6-2|HIPK2	nc|ENSG00000064393|Q9H2X6-2|HIPK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.2049865722656	2	405.203607	808.392661	-0.0495	-2.0058E-05	2.7782	0.0011257	2.7287	0.0011057	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.86288	1	7769	7769		26.796	2.5934	1	162370			59459	1103	39721	39737	67439	67439					-0.019199443043362407
TSTHASTC	8	Unmodified	_TSTHASTC_					0	0	0			REV__ENST00000429897.5_1_3:195393072-195404601:+|nuORF	REV__ENST00000429897.5_1_3:195393072-195404601:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.20916748046875	2	404.16871	806.322867	-0.49245	-0.00019903	3.1295	0.0012648	2.637	0.0010658	404.16993052003306	85.316	0.6017	85.763	85.509	86.111	0.44736					25	14	2	0	0	0	0.4196	1	10032	10032		16.473	0	1	283090	+		59460	16672	39722	39738	67440	67440					-0.08804146244585809
TSTILILVP	9	Unmodified	_TSTILILVP_					0	0	0		ENST00000504398.1_1_5:28809070-28809244:-|nuORF	ENST00000504398.1_1_5:28809070-28809244:-|nuORF	ENST00000504398.1_1_5:28809070-28809244:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.80352783203125	2	478.804968	955.595384	-1.2382	-0.00059286	1.4969	0.00071673	0.2587	0.00012387	478.80558529591235	40.624	1.0284	40.581	39.923	40.951	-0.042892					45	26	2	0	0	0	0.7932	1	2982	2982		24.203	4.206	1	267990			59461	12902	39723	39739	67441	67441					0.11580985768227947
TSTILILVP	9	Unmodified	_TSTILILVP_					0	0	0		ENST00000504398.1_1_5:28809070-28809244:-|nuORF	ENST00000504398.1_1_5:28809070-28809244:-|nuORF	ENST00000504398.1_1_5:28809070-28809244:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8044128417969	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.656	1	42.61	42.11	43.11	-0.045467								0	0	0	0.33559	1	2881	2881		45.952	18.07	1				59462	12902	39723	39739	67442	67442					0.11580985768227947
TSTLQPTQ	8	Unmodified	_TSTLQPTQ_					0	0	0			REV__ENSG00000101972|ENST00000371145|STAG2;REV__nc|ENSG00000101972|Q8N3U4|STAG2	REV__nc|ENSG00000101972|Q8N3U4|STAG2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2628479003906	2	438.227082	874.439611	-1.5764	-0.00069084	3.1837	0.0013952	1.6073	0.00070435	438.2283655112672	40.325	0.26901	40.332	40.156	40.425	0.0065002					9	6	2	0	0	0	0.4196	1	2559	2559		29.17	0	1	111340	+		59463	17314;29747	39724	39740	67443	67443					-0.0026308475319183344
TSTPTSPVL	9	Unmodified	_TSTPTSPVL_					0	0	0			REV__ENST00000527370.5_1_11:67259506-67263940:-|nuORF	REV__ENST00000527370.5_1_11:67259506-67263940:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7453308105469	2	451.745108	901.475663	0.00016611	7.5038E-08	0.28443	0.00012849	0.2846	0.00012857	451.7450667794695	33.328	0.79413	33.331	32.989	33.783	0.0030785					41	18	3	0	0	0	0.22631	1	1925	1925		71.296	7.9894	1	260270	+		59464	17825	39725	39741	67444	67444					0.02098372423665751
TSTTAKKT	8	Unmodified	_TSTTAKKT_					0	0	0		ENST00000520970.5_1_8:22058712-22069238:+|nuORF	ENST00000520970.5_1_8:22058712-22069238:+|nuORF	ENST00000520970.5_1_8:22058712-22069238:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.2414855957031	2	419.23745	836.460347	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.74	1	112.76	112.26	113.26	0.028854								0	0	0	0.29755	1	12302	12302		24.203	3.7209	1				59465	13165	39726	39742	67445	67445					0.03557505626474722
TSTTIQKK	8	Unmodified	_TSTTIQKK_					0	0	0			REV__ENST00000311117.7_1_7:104716496-104717548:+|nuORF	REV__ENST00000311117.7_1_7:104716496-104717548:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	453.76605224609375	2	453.766374	905.518196	-0.13114	-5.9507E-05	-1.0027	-0.00045497	-1.1338	-0.00051448	453.7659298914551	41.976	1.7233	41.931	41.177	42.9	-0.045471					104	47	4	0	0	0	0.87922	1	2821	2821		31.955	3.7006	1	768160	+		59466	24900	39727	39743	67446	67446					0.0616576755190863
TSVEQYEPQYL	11	Unmodified	_TSVEQYEPQYL_					0	0	0			REV__ENSG00000149428|ENST00000617285|HYOU1	REV__ENSG00000149428|ENST00000617285|HYOU1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	452.8818664550781	3	452.882114	1355.62451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.655	1	19.582	19.082	20.082	-0.073704								0	0	0	0.56276	1	448	448		21.78	3.9473	1		+		59467	20167	39728	39744	67447	67447					-0.039075664640904506
TSVGLPLPP	9	Unmodified	_TSVGLPLPP_					0	0	0		nc|ENSG00000103449|Q9NSC2-2|SALL1;ENSG00000103449|ENST00000251020|SALL1	nc|ENSG00000103449|Q9NSC2-2|SALL1	nc|ENSG00000103449|Q9NSC2-2|SALL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.88629150390625	2	440.760561	879.506569	0.2515	0.00011085	-2.577	-0.0011359	-2.3255	-0.001025	440.7590055646029	18.931	0.47493	18.454	18.218	18.693	-0.47694					12	10	2	0	0	0	0.20789	1	422	422		12.207	0	1	24726			59468	2084	39729	39745	67448	67448					0.06199570528565346
TSVGTDTF	8	Unmodified	_TSVGTDTF_					0	0	0		ENSG00000140836|ENST00000268489|ZFHX3;chr16:73456258-73680180|53|17.49|0.14|6.93|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73318336-73456003|47|12.38|0.07|7.55|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73257136-73318240|51|12.71|0.0|20.28|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73143831-73257047|49|21.06|0.1|7.71|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73131094-73143752|54|16.8|0.2|6.36|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73093598-73130968|46|12.0|0.08|7.25|-|ENST00000641206|ZFHX3,ZFHX3;nc|ENSG00000140836|Q15911-2|ZFHX3;chr16:72950965-73058530|60|21.05|0.31|6.07|-|ENST00000397992|ZFHX3,ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	ENSG00000140836|ENST00000268489|ZFHX3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.23779296875	2	414.192708	826.370863	-1.8295	-0.00075776	1.2226	0.00050638	-0.60692	-0.00025138	414.1934082245725	78.734	0.51446	78.861	78.573	79.087	0.12695					19	14	2	0	0	0	0.4196	1	7413	7413		19.36	5.5846	1	138150			59469	208	39730	39746	67449	67449					-0.04926749052901869
TSVLLGHGR	9	Unmodified	_TSVLLGHGR_					0	0	0		ENST00000414441.5_1_7:100031292-100031550:+|nuORF	ENST00000414441.5_1_7:100031292-100031550:+|nuORF	ENST00000414441.5_1_7:100031292-100031550:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	471.2421875	2	470.272158	938.529764	-1.1268	-0.00052992	0.04329	2.0358E-05	-1.0836	-0.00050957	470.2716813658094	85.805	0.25255	85.805	85.658	85.91	0					6	5	2	0	0	0	0.20789	1	8142	8142		15.642	9.3292	1	20866			59470	11368	39731	39747	67450	67450					0.05804009365908769
TSVPNRRTP	9	Unmodified	_TSVPNRRTP_					0	0	0			REV__AluSx_dup112782|chr20:62866901-62867224:+|1.1579892460080652|0.0048463966442357|7.9|58.0|5|2|sense	REV__AluSx_dup112782|chr20:62866901-62867224:+|1.1579892460080652|0.0048463966442357|7.9|58.0|5|2|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.2861328125	2	514.285797	1026.55704	0.23966	0.00012325	2.2721	0.0011685	2.5117	0.0012917	514.286796709377	80.471	0.79565	80.998	80.611	81.406	0.52677					33	18	3	0	0	0	0.73802	1	9278	9278		37.812	4.9991	1	252550	+		59471	15393	39732	39748	67451	67451					0.044824929062770025
TSYLPPPLL	9	Unmodified	_TSYLPPPLL_					0	0	0		ENST00000380135.7_1_12:51450138-51451833:+|nuORF;nc|ENSG00000050426|Q6P1Q0-5|LETMD1;ENST00000546814.1_1_12:51450084-51453211:+|nuORF;ENST00000552433.1_1_12:51449776-51450294:+|nuORF;ENST00000548516.5_1_12:51450138-51453211:+|nuORF;nc|ENSG00000050426|Q6P1Q0-4|LETMD1;nc|ENSG00000050426|Q6P1Q0-2|LETMD1;ENSG00000050426|ENST00000262055|LETMD1;nc|ENSG00000050426|Q6P1Q0-7|LETMD1	ENST00000380135.7_1_12:51450138-51451833:+|nuORF	ENST00000380135.7_1_12:51450138-51451833:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.120361328125	2	500.789318	999.564084	-0.0064097	-3.2099E-06	1.1038	0.00055275	1.0973	0.00054954	500.7902786472863	36.407	0.45962	36.689	36.511	36.971	0.28173					16	10	2	0	0	0	0.20789	1	2836	2836		23.042	0	1	62325			59472	995	39733	39749	67452	67452					0.06428412734146605
TTAAICILLN	10	Unmodified	_TTAAICILLN_					0	0	0		ENSG00000189433|ENST00000339480|GJB4	ENSG00000189433|ENST00000339480|GJB4	ENSG00000189433|ENST00000339480|GJB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.7933349609375	2	516.791535	1031.56852	-0.27075	-0.00013992	3.9455	0.002039	3.6748	0.0018991	516.7935126790467	88.273	4.1566	88.478	86.776	90.932	0.20586					268	98	4	0	0	0	0.86589	1	8827	8827		29.15	1.2673	1	817800			59473	8007	39734	39750	67453	67453					0.05399553885422392
TTAKGIMFHSA	11	Unmodified	_TTAKGIMFHSA_					0	0	0			REV__ENST00000215832.10_1_22:22118098-22118134:-|nuORF	REV__ENST00000215832.10_1_22:22118098-22118134:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3538818359375	2	582.297516	1162.58048	-1.3471	-0.00078439	0.88529	0.0005155	-0.46177	-0.00026889	582.2978173450261	103.8	0.12243	103.91	103.81	103.93	0.11494					4	2	2	0	0	0	0.17347	1	10919	10919		36.447	0.12911	1	43700	+		59474	24117	39735	39751	67454	67454					0.005691706285915643
TTAPPPLPRI	10	Unmodified	_TTAPPPLPRI_					0	0	0		ENSG00000146278.11,PNRC1,chr6,+,I1.1,89081435,89081835|12|11.62|2|intron;nc|ENSG00000146278|Q12796-2|PNRC1;ENSG00000146278|ENST00000336032|PNRC1	ENSG00000146278.11,PNRC1,chr6,+,I1.1,89081435,89081835|12|11.62|2|intron	ENSG00000146278.11,PNRC1,chr6,+,I1.1,89081435,89081835|12|11.62|2|intron	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8168334960938	2	531.818941	1061.62333	-0.04786	-2.5453E-05	-3.9998	-0.0021272	-4.0476	-0.0021526	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.86218	1	8794	8794		32.812	1.2826	1	4916300			59475	4833	39736	39752	67455	67455					0.09498308748334239
TTARAQLRL	9	Unmodified	_TTARAQLRL_					0	0	0			REV__SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|16|2|sense	REV__SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|16|2|sense	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.318115234375	2	515.311815	1028.60908	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.2	1	106.39	105.89	106.89	0.18647								0	0	0	0.29134	1	12992	12992		34.173	2.2177	1		+		59476	30332	39737	39753	67456	67456					0.09591656320026232
TTATALKK	8	Unmodified	_TTATALKK_					0	0	0			REV__nc|ENSG00000214193|A4FU49-4|SH3D21	REV__nc|ENSG00000214193|A4FU49-4|SH3D21	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.2579650878906	2	417.258185	832.501818	0.73077	0.00030492	0.058378	2.4359E-05	0.78915	0.00032928	417.25810331191536	21.663	2.6932	21.727	21.148	23.842	0.064745					160	99	2	0	0	0	0.83058	1	612	612		12.959	0.75233	1	105380	+		59477	23649	39738	39754	67457	67457					0.07886686385802477
TTATIRILSTG	11	Unmodified	_TTATIRILSTG_					0	0	0		ENST00000563399.5_1_16:30663274-30664201:+|nuORF	ENST00000563399.5_1_16:30663274-30664201:+|nuORF	ENST00000563399.5_1_16:30663274-30664201:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3300170898438	2	567.32987	1132.64519	0.79571	0.00045143	-1.0349	-0.00058711	-0.23916	-0.00013568	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.7144	1	9295	9295		29.17	2.4771	1	18145000			59478	13869	39739	39755	67458	67458					0.08417068706239661
TTAVRLPG	8	Unmodified	_TTAVRLPG_					0	0	0		ENSG00000176715|ENST00000614302|ACSF3	ENSG00000176715|ENST00000614302|ACSF3	ENSG00000176715|ENST00000614302|ACSF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.7412109375	2	407.742702	813.470852	1.4003	0.00057095	-3.4227	-0.0013956	-2.0224	-0.00082463	407.7411625690843	24.068	0.6881	23.555	23.28	23.968	-0.51365					37	15	3	0	0	0	0.87064	1	1137	1137		29.15	3.5755	1	299450			59479	7095	39740	39756	67459	67459					0.05665533071567097
TTCDPPAWG	9	Unmodified	_TTCDPPAWG_					0	0	0			REV__ENSG00000143537|ENST00000356955|ADAM15	REV__ENSG00000143537|ENST00000356955|ADAM15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2014465332031	2	474.20001	946.385467	1.6404	0.00077786	2.4856	0.0011787	4.126	0.0019565	474.20101640088683	96.521	0.71208	96.926	96.547	97.259	0.40498					37	16	3	0	0	0	0.7932	1	11575	11575		26.796	3.7536	1	495020	+		59480	19820	39741	39757	67460	67460					-0.08987000176398396
TTCMSPGGK	9	Unmodified	_TTCMSPGGK_					0	0	0		ENST00000553505.1_1_14:24044793-24046767:-|nuORF	ENST00000553505.1_1_14:24044793-24046767:-|nuORF	ENST00000553505.1_1_14:24044793-24046767:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.1932678222656	2	441.196413	880.378273	1.4887	0.00065681	-0.59757	-0.00026365	0.89113	0.00039316	441.1959717407178	97.924	0.99309	98.3	97.873	98.866	0.37679					54	23	4	0	0	0	0.69624	1	11806	11806		40.778	0.20554	1	480390			59481	13699	39742	39758	67461	67461					-0.06670056048471906
TTDYLVQGY	9	Unmodified	_TTDYLVQGY_					0	0	0		nc|ENSG00000160111|Q8IZJ3-2|CPAMD8;ENSG00000160111|ENST00000443236|CPAMD8	nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2536010742188	2	530.253297	1058.49204	-0.11428	-6.0599E-05	-0.96984	-0.00051426	-1.0841	-0.00057486	530.2525737787886	65.479	0.58937	65.609	65.287	65.876	0.12996					50	28	3	0	0	0	0.096131	2	5810	5799;5810		93.195	21.318	1	782560			59482	5554	39743	39759	67462;67463	67463					-0.03486546410204028
TTDYLVQGY	9	Unmodified	_TTDYLVQGY_					0	0	0		nc|ENSG00000160111|Q8IZJ3-2|CPAMD8;ENSG00000160111|ENST00000443236|CPAMD8	nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2551879882812	2	530.253297	1058.49204	0.51379	0.00027244	-1.6925	-0.00089746	-1.1787	-0.00062502	530.2523007389746	65.494	0.49237	65.62	65.305	65.797	0.12531					45	26	2	0	0	0	0.096131	3	5812	5806;5812;5819		93.195	21.318	1	848910			59483	5554	39743	39759	67464;67465;67466	67465					-0.03486546410204028
TTDYLVQGY	9	Unmodified	_TTDYLVQGY_					0	0	0		nc|ENSG00000160111|Q8IZJ3-2|CPAMD8;ENSG00000160111|ENST00000443236|CPAMD8	nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2540893554688	2	530.253297	1058.49204	-0.71962	-0.00038158	-0.34618	-0.00018356	-1.0658	-0.00056514	530.2528319409346	65.527	0.37926	65.567	65.376	65.756	0.040207					36	18	3	0	0	0	0.065196	3	5821	5815;5821;5823		101.6	24.283	1	843540			59484	5554	39743	39759	67467;67468;67469	67468					-0.03486546410204028
TTEIGLHDLRK	11	Unmodified	_TTEIGLHDLRK_					0	0	0		nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4	nc|ENSG00000125257|O15439-2|ABCC4	nc|ENSG00000125257|O15439-2|ABCC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8623657226562	2	641.859326	1281.7041	1.706	0.001095	-1.2341	-0.00079213	0.47193	0.00030291	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.70737	1	12922	12922		30.318	0	1	27133000			59485	3378	39744	39760	67470	67470					0.07451545000526494
TTENLRVAGK	10	Unmodified	_TTENLRVAGK_					0	0	0		ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	544.806640625	2	544.806562	1087.59857	0.78335	0.00042678	-0.77619	-0.00042287	0.0071598	3.9007E-06	544.8060162221166	24.686	0.87633	24.7	24.336	25.212	0.013996					110	42	4	0	0	0	0.63899	1	870	870		47.96	0	1	1007500			59486	1337	39745	39761	67471	67471					0.05827628874953916
TTETIRIRYF	10	Unmodified	_TTETIRIRYF_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17;ENST00000586052.5_1_17:76475094-76487566:-|nuORF	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801513671875	3	433.906705	1298.69829	1.4587	0.00063296	-3.2988	-0.0014314	-1.84	-0.00079841	434.2384705027523	34.192	0.20628	34.496	34.406	34.613	0.30494					5	4	2	0	0	0	0.37624	1	2545	2545		35.152	5.6013	1	86841			59487	7880	39746	39762	67472	67472					0.060884464888886214
TTETQVLVA	9	Unmodified	_TTETQVLVA_					0	0	0		ENST00000509087.1_1_5:140053844-140054778:-|nuORF;nc|ENSG00000170445|P12081-3|HARS1;nc|ENSG00000170445|P12081-2|HARS1;nc|ENSG00000170445|P12081-4|HARS1;ENSG00000170445|ENST00000504156|HARS1	ENST00000509087.1_1_5:140053844-140054778:-|nuORF	ENST00000509087.1_1_5:140053844-140054778:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2865295410156	2	481.263665	960.512776	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.817	1	21.76	21.26	22.26	-0.057203								0	0	0	0.28772	1	632	632		35.618	1.4457	1				59488	6590	39747	39763	67473	67473					0.030940439694290944
TTETTSPA	8	Unmodified	_TTETTSPA_					0	0	0			REV__ENST00000371417.3_1_9:140512436-140512586:-|nuORF	REV__ENST00000371417.3_1_9:140512436-140512586:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.21112060546875	2	404.190165	806.365778	-1.795	-0.00072552	-2.6708	-0.0010795	-4.4658	-0.001805	404.18892353170605	84.074	2.5179	84.212	83.308	85.826	0.13811					82	57	2	0	0	0	0.4196	1	8320	8320		31.955	7.7521	1	152260	+		59489	25688	39748	39764	67474	67474					-0.04515052915519391
TTEVGSLP	8	Unmodified	_TTEVGSLP_					0	0	0		ENST00000546525.5_1_6:169959286-169959583:-|nuORF	ENST00000546525.5_1_6:169959286-169959583:-|nuORF	ENST00000546525.5_1_6:169959286-169959583:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.212158203125	2	402.210901	802.407249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.886	1	24.936	24.436	25.436	0.050451								0	0	0	0.29498	1	952	952		26.796	0	1				59490	13591	39749	39765	67475	67475					-0.0018587215619163544
TTFLGSLIF	9	Unmodified	_TTFLGSLIF_					0	0	0		nc|ENSG00000196335|Q9BXU1-3|STK31;nc|ENSG00000196335|Q9BXU1-2|STK31;ENSG00000196335|ENST00000355870|STK31	nc|ENSG00000196335|Q9BXU1-3|STK31	nc|ENSG00000196335|Q9BXU1-3|STK31	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.7810974121094	2	499.781493	997.548434	0.99428	0.00049692	-1.303	-0.00065121	-0.30871	-0.00015429	499.78069755122226	99.299	0.79534	99.661	99.33	100.13	0.36136					41	19	3	0	0	0	0.28875	2	11984	11984;11996		65.803	5.4797	1	772820			59491	8037	39750	39766	67476;67477	67476					0.049561262170982445
TTFPRPVTV	9	Unmodified	_TTFPRPVTV_					0	0	0		ENSG00000147140|ENST00000276079|NONO;ENST00000471419.6_1_X:70511819-70517312:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO	ENSG00000147140|ENST00000276079|NONO	ENSG00000147140|ENST00000276079|NONO	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.290771484375	2	509.290017	1016.56548	-1.3961	-0.000711	1.2285	0.00062565	-0.16759	-8.5354E-05	509.2906137003978	53.27	0.57617	53.27	52.908	53.484	0					27	15	2	0	0	0	0.66686	1	4405	4405		42.864	2.0861	1	67955			59492	4885	39751	39767	67478	67478					0.057860468229023354
TTGAVSGSFVR	11	Unmodified	_TTGAVSGSFVR_					0	0	0			REV__ENST00000478000.5_1_7:944755-944842:-|nuORF	REV__ENST00000478000.5_1_7:944755-944842:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	541.2857055664062	2	541.285463	1080.55637	-0.03411	-1.8463E-05	-0.10994	-5.9509E-05	-0.14405	-7.7972E-05	541.2852539675774	20.45	0.7453	20.494	20.171	20.916	0.043749					88	36	3	0	0	0	0.43778	1	483	483		56.434	5.0983	1	513130	+		59493	27371	39752	39768	67479	67479					0.019316534665676954
TTGLNPIP	8	Unmodified	_TTGLNPIP_					0	0	0			REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	REV__nc|ENSG00000067798|Q8IVL0-3|NAV3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.7287292480469	2	406.729261	811.443968	-1.8366	-0.00074698	-0.93352	-0.00037969	-2.7701	-0.0011267	406.7287979203731	76.234	2.0799	76.359	74.725	76.805	0.12485					97	60	2	0	0	0	0.84341	1	7079	7079		24.203	0	1	145690	+		59494	16548	39753	39769	67480	67480					0.03070424460383947
TTGTHLPL	8	Unmodified	_TTGTHLPL_					0	0	0		ENST00000421442.2_2_3:184090707-184093318:-|nuORF;ENST00000204615.11_1_3:184090388-184093318:-|nuORF	ENST00000421442.2_2_3:184090707-184093318:-|nuORF	ENST00000421442.2_2_3:184090707-184093318:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2352600097656	2	420.23471	838.454868	0.72887	0.0003063	-0.40206	-0.00016896	0.32681	0.00013734	420.23432070824424	38.593	0.61893	38.605	38.358	38.976	0.011173					28	13	3	0	0	0	0.73619	1	2648	2648		65.897	4.9255	1	144400			59495	9101	39754	39770	67481	67481					0.029178268346868208
TTGVLRRPGP	10	Unmodified	_TTGVLRRPGP_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	527.308349609375	2	527.311815	1052.60908	-1.3069	-0.00068917	0.69938	0.00036879	-0.60757	-0.00032038	527.3121285428249	81.781	0.65585	81.895	81.526	82.181	0.11426					33	14	3	0	0	0	0.3985	1	7791	7791		64.207	9.431	1	233680	+		59496	16807	39755	39771	67482	67482					0.08487656320039605
TTGVLRRPGP	10	Unmodified	_TTGVLRRPGP_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.3104858398438	2	527.311815	1052.60908	0.20582	0.00010853	-1.5695	-0.00082761	-1.3637	-0.00071908	527.3108601932355	82.119	0.63732	82.546	82.236	82.873	0.42645					40	15	3	0	0	0	0.37206	2	9478	9478;9503		66.429	2.222	1	1775300	+		59497	16807	39755	39771	67483;67484	67483					0.08487656320039605
TTGVLRRPGP	10	Unmodified	_TTGVLRRPGP_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	527.311815	1052.60908	-0.03794	-2.0006E-05	1.3186	0.00069532	1.2807	0.00067531	527.3134276752395	82.275	0.69675	82.341	82.132	82.828	0.06591	-0.24407	0.0024848	NaN	66.429	19	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51958	+		59498	16807	39755	39771							0.08487656320039605
TTGVLRRPGP	10	Unmodified	_TTGVLRRPGP_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	527.311815	1052.60908	-0.038014	-2.0045E-05	1.1803	0.00062238	1.1423	0.00060233	527.3129606241412	81.804	0.43764	81.868	81.693	82.13	0.064384	-0.086679	0.0020265	NaN	64.207	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34359	+		59499	16807	39755	39771							0.08487656320039605
TTGVLRRPGP	10	Unmodified	_TTGVLRRPGP_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	527.311815	1052.60908	1.0289	0.00054255	2.9312	0.0015457	3.9601	0.0020882	527.3144881152953	82.602	0.90526	82.536	82.106	83.011	-0.066185	-0.048797	0.0041854	NaN	66.429	25	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55740	+		59500	16807	39755	39771							0.08487656320039605
TTGVLRRPGP	10	Unmodified	_TTGVLRRPGP_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	527.311815	1052.60908	-0.1273	-6.7125E-05	-0.063482	-3.3475E-05	-0.19078	-0.0001006	527.3118674397979	82.562	1.1741	82.717	82.178	83.352	0.15474	0.13216	0.0010272	NaN	66.429	60	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217720	+		59501	16807	39755	39771							0.08487656320039605
TTGVLRRPGP	10	Unmodified	_TTGVLRRPGP_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	527.311815	1052.60908	0.66589	0.00035113	-1.2225	-0.00064466	-0.55665	-0.00029353	527.311251718459	82.546	1.1493	82.692	82.244	83.393	0.1455	0.10715	-0.00019522	NaN	66.429	50	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	268320	+		59502	16807	39755	39771							0.08487656320039605
TTGVLRRPGP	10	Unmodified	_TTGVLRRPGP_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	527.311815	1052.60908	-1.3393	-0.00070621	0.94137	0.00049639	-0.3979	-0.00020982	527.3123433168158	82.621	1.2764	82.747	82.193	83.47	0.12601	0.1624	0.0020869	NaN	66.429	69	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	277590	+		59503	16807	39755	39771							0.08487656320039605
TTGVLRRPGP	10	Unmodified	_TTGVLRRPGP_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	527.311815	1052.60908	-1.3069	-0.00068917	0.69938	0.00036879	-0.60757	-0.00032038	527.3121285428249	81.781	0.65585	81.895	81.526	82.181	0.11426	-0.05992	0.0015194	NaN	64.207	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	233680	+		59504	16807	39755	39771							0.08487656320039605
TTGVLRRPGP	10	Unmodified	_TTGVLRRPGP_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	527.311815	1052.60908	0.24252	0.00012788	-1.0321	-0.00054421	-0.78953	-0.00041633	527.3112094391755	81.648	0.60178	82.074	81.711	82.313	0.42645	0.11919	-0.00030663	NaN	64.207	43	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2322400	+		59505	16807	39755	39771							0.08487656320039605
TTGVLRRPGP	10	Unmodified	_TTGVLRRPGP_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	527.311815	1052.60908	0.25705	0.00013555	-1.0394	-0.00054809	-0.78234	-0.00041254	527.3112225277129	81.589	0.5984	82.089	81.744	82.342	0.49967	0.13433	-0.00031437	NaN	64.207	40	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2466200	+		59506	16807	39755	39771							0.08487656320039605
TTIAKDKV	8	Unmodified	_TTIAKDKV_					0	0	0			REV__ENST00000532980.3_1_11:59055317-59056556:-|nuORF	REV__ENST00000532980.3_1_11:59055317-59056556:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.7613830566406	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.84341	1	3057	3057		24.203	1.1603	1	22924000	+		59507	28334	39756	39772	67485	67485					0.07010669040232642
TTIIQLQPLQE	11	Unmodified	_TTIIQLQPLQE_					0	0	0		ENSG00000101000|ENST00000216968|PROCR	ENSG00000101000|ENST00000216968|PROCR	ENSG00000101000|ENST00000216968|PROCR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.364013671875	2	642.36391	1282.71327	-0.042366	-2.7214E-05	-2.7266	-0.0017515	-2.7689	-0.0017787	642.3621422971506	112.55	0.35496	112.48	112.39	112.75	-0.063889					30	11	4	0	0	0	0.7144	1	12239	12239		29.17	2.1227	1	319940			59508	1892	39757	39773	67486	67486					0.08321893566221661
TTISGKVK	8	Unmodified	_TTISGKVK_					0	0	0			REV__ENSG00000189233|ENST00000413272|NUGGC	REV__ENSG00000189233|ENST00000413272|NUGGC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.2589111328125	2	417.258185	832.501818	0.73077	0.00030492	0.058378	2.4359E-05	0.78915	0.00032928	417.25810331191536	21.663	2.6932	21.727	21.148	23.842	0.064745					160	99	2	0	0	0	0.82419	1	603	603		13.775	0	1	105380	+		59509	23072	39758	39774	67487	67487					0.07886686385813846
TTISGKVK	8	Unmodified	_TTISGKVK_					0	0	0			REV__ENSG00000189233|ENST00000413272|NUGGC	REV__ENSG00000189233|ENST00000413272|NUGGC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.25860595703125	2	417.258185	832.501818	0.52563	0.00021932	-0.071237	-2.9724E-05	0.45439	0.0001896	417.2580621570988	22.515	2.686	21.904	21.633	24.319	-0.6107					140	63	3	0	0	0	0.81184	1	911	911		19.997	3.5236	1	2260100	+		59510	23072	39758	39774	67488	67488					0.07886686385813846
TTISSVLI	8	Unmodified	_TTISSVLI_					0	0	0		ENSG00000196531|ENST00000454682|NACA;nc|ENSG00000196531|E9PAV3-2|NACA	ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.25140380859375	2	417.252569	832.490584	-0.040205	-1.6776E-05	1.1748	0.00049019	1.1346	0.00047341	417.25296314698	35.536	1.154	35.476	35.254	36.408	-0.060333					58	32	2	0	0	0	0.82464	1	1937	1937		21.702	6.0661	1	236350			59511	8069	39759	39775	67489	67489					0.06763864291679056
TTIVTPVPL	9	Unmodified	_TTIVTPVPL_					0	0	0		ENSG00000166343|ENST00000299432|MSS51	ENSG00000166343|ENST00000299432|MSS51	ENSG00000166343|ENST00000299432|MSS51	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.78948974609375	2	470.789318	939.564084	0.22344	0.00010519	1.5773	0.00074259	1.8008	0.00084778	470.78980973205034	44.363	1.3298	44.34	43.809	45.139	-0.023079					53	30	2	0	0	0	0.7932	1	3459	3459		24.203	1.1603	1	151650			59512	6181	39760	39776	67490	67490					0.09188412734147278
TTKELATSH	9	Unmodified	_TTKELATSH_					0	0	0			REV__ENSG00000238083|ENST00000576629|LRRC37A2	REV__ENSG00000238083|ENST00000576629|LRRC37A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.6479187011719	2	494.258914	986.503274	-2.0044	-0.00099069	-3.7314	-0.0018443	-5.7358	-0.002835	494.2591128003238	42.515	0.9398	43.213	42.891	43.83	0.69754					36	22	3	0	0	0	0.20789	1	3761	3761		14.865	0	1	301270	+		59513	22141	39761	39777	67491	67491					0.009482756839133799
TTKHIRTG	8	Unmodified	_TTKHIRTG_					0	0	0			REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|85|3|sense	REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|85|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2640686035156	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.88601	1	9563	9563		34.173	0	1	4402400	+		59514	29495	39762	39778	67492	67492					0.05435722848858404
TTKKEKKEK	9	Unmodified	_TTKKEKKEK_					0	0	0			REV__ENST00000303391.10_2_X:153289994-153290270:-|nuORF	REV__ENST00000303391.10_2_X:153289994-153290270:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.34033203125	2	560.340238	1118.66592	-0.60038	-0.00033642	0.6031	0.00033794	0.0027182	1.5231E-06	560.3405348095038	89.752	2.8802	89.752	87.726	90.606	0					163	66	4	0	0	0	0.73802	1	8704	8704		37.812	2.6595	1	504890	+		59515	24800	39763	39779	67493	67493					0.11133659085885483
TTKKEKKEK	9	Unmodified	_TTKKEKKEK_					0	0	0			REV__ENST00000303391.10_2_X:153289994-153290270:-|nuORF	REV__ENST00000303391.10_2_X:153289994-153290270:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3406982421875	2	560.340238	1118.66592	0.86176	0.00048288	-1.0266	-0.00057525	-0.16485	-9.237E-05	560.3396263741522	102.15	3.5046	102.29	101.63	105.14	0.13523					374	86	6	0	0	0	0.71772	1	10846	10846		39.253	2.8061	1	126390000	+		59516	24800	39763	39779	67494	67494					0.11133659085885483
TTKKEKKEK	9	Unmodified	_TTKKEKKEK_					0	0	0			REV__ENST00000303391.10_2_X:153289994-153290270:-|nuORF	REV__ENST00000303391.10_2_X:153289994-153290270:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.340576171875	2	560.340238	1118.66592	-1.4184	-0.00079481	1.424	0.00079793	0.005577	3.125E-06	560.3409019697357	89.331	3.0544	89.504	87.698	90.752	0.17234					137	71	4	0	0	0	0.73802	1	8905	8905		37.812	4.2959	1	613340	+		59517	24800	39763	39779	67495	67495					0.11133659085885483
TTKKENFRLI	10	Unmodified	_TTKKENFRLI_					0	0	0		L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	L1PA6_dup2267|chr6:2299837-2303022:+|1.1325339900224989|0.3006554191737456|1.91|63.0|66|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2469482421875	3	417.24695	1248.71902	2.3362	0.00097477	-1.526	-0.0006367	0.81023	0.00033806	417.24614942996294	103.4	0.79668	103.62	103.17	103.96	0.22556					40	19	3	0	0	0	0.85694	1	12595	12595		15.333	0	1	988660			59518	14641	39764	39780	67496	67496					0.10461036868582596
TTKKKSGT	8	Unmodified	_TTKKKSGT_					0	0	0			REV__ENST00000508918.5_1_4:16504706-16675844:-|nuORF	REV__ENST00000508918.5_1_4:16504706-16675844:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2455139160156	2	425.753267	849.491981	2.6779	0.0011401	-4.005	-0.0017052	-1.3272	-0.00056504	425.75153587284353	88.276	1.2376	88.326	87.988	89.226	0.050415					45	29	2	0	0	0	0.4196	1	9033	9033		47.657	19.775	1	206230	+		59519	21601	39765	39781	67497	67497					0.06121498380423418
TTKKLLKSI	9	Unmodified	_TTKKLLKSI_					0	0	0			REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|12|1|sense	REV__L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|12|1|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3139038085938	2	516.344792	1030.67503	2.7446	0.0014172	2.014	0.0010399	4.7586	0.0024571	516.3459151306026	99.192	0.24546	99.138	98.955	99.2	-0.053734					9	5	3	0	0	0	0.20789	1	10731	10731		16.473	0	1	337400	+		59520	29630	39766	39782	67498	67498					0.16092052442240856
TTKKLSTLQSA	11	Unmodified	_TTKKLSTLQSA_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3426513671875	2	589.342978	1176.6714	2.2135	0.0013045	-2.6544	-0.0015644	-0.44092	-0.00025985	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.69248	2	9629	9605;9629		32.751	4.8683	1	5579200			59521	3009	39767	39783	67499;67500	67500					0.09013337877718186
TTKKLSTLQSA	11	Unmodified	_TTKKLSTLQSA_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.342529296875	2	589.342978	1176.6714	0.80964	0.00047716	-1.1939	-0.00070362	-0.38426	-0.00022646	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.69931	1	9359	9359		31.634	1.3165	1	6634500			59522	3009	39767	39783	67501	67501					0.09013337877718186
TTKKLSTLQSA	11	Unmodified	_TTKKLSTLQSA_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3428955078125	2	589.342978	1176.6714	0.83312	0.00049099	-0.98017	-0.00057766	-0.14705	-8.6662E-05	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.69931	1	10048	10048		31.634	4.9414	1	20363000			59523	3009	39767	39783	67502	67502					0.09013337877718186
TTKKLSTLQSA	11	Unmodified	_TTKKLSTLQSA_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3427124023438	2	589.342978	1176.6714	-1.324	-0.00078029	0.94408	0.00055638	-0.37993	-0.00022391	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.70584	1	9327	9327		30.569	2.4874	1	5946500			59524	3009	39767	39783	67503	67503					0.09013337877718186
TTKKLSTLQSA	11	Unmodified	_TTKKLSTLQSA_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3431396484375	2	589.342978	1176.6714	-1.324	-0.0007803	1.1649	0.00068655	-0.15907	-9.3746E-05	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.67762	1	9915	9915		35.178	2.3658	1	17904000			59525	3009	39767	39783	67504	67504					0.09013337877718186
TTKKLYLIDL	10	Unmodified	_TTKKLYLIDL_					0	0	0			REV__ENST00000216410.7_1_14:53245033-53245099:-|nuORF	REV__ENST00000216410.7_1_14:53245033-53245099:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.246826171875	3	403.248068	1206.72238	-1.7912	-0.0007223	-1.1732	-0.00047308	-2.9644	-0.0011954	403.24755766805464	104.31	3.2281	104.48	103.53	106.76	0.17096					307	80	7	0	0	0	0.85466	1	11149	11149		32.751	8.5187	1	20673000	+		59526	24132	39768	39784	67505	67505					0.12728286922560983
TTKKPPLAQK	10	Unmodified	_TTKKPPLAQK_					0	0	0		ENST00000538236.1_1_12:123345767-123346160:+|nuORF;ENSG00000130787|ENST00000253083|HIP1R	ENST00000538236.1_1_12:123345767-123346160:+|nuORF	ENST00000538236.1_1_12:123345767-123346160:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.3455200195312	2	556.345323	1110.67609	0.66359	0.00036919	-0.58219	-0.0003239	0.081399	4.5286E-05	556.344844491865	17.817	0.61456	17.335	16.991	17.606	-0.48256					33	13	4	0	0	0	0.38353	1	300	300		65.465	15.929	1	319290			59527	3686	39769	39785	67506	67506					0.12518266811139256
TTKKPPLAQK	10	Unmodified	_TTKKPPLAQK_					0	0	0		ENST00000538236.1_1_12:123345767-123346160:+|nuORF;ENSG00000130787|ENST00000253083|HIP1R	ENST00000538236.1_1_12:123345767-123346160:+|nuORF	ENST00000538236.1_1_12:123345767-123346160:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.34423828125	2	556.345323	1110.67609	0.14884	8.2805E-05	-0.16931	-9.4193E-05	-0.02047	-1.1388E-05	556.3451362150047	17.953	0.56242	17.332	17.023	17.585	-0.62141					24	13	2	0	0	0	0.78666	1	323	323		40.058	5.8856	1	371980			59528	3686	39769	39785	67507	67507					0.12518266811139256
TTKKTRTAKMN	11	Unmodified	_TTKKTRTAKMN_					0	0	0			REV__ENST00000558575.1_1_14:75761222-75762892:+|nuORF	REV__ENST00000558575.1_1_14:75761222-75762892:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3589477539062	2	640.361179	1278.7078	-1.1585	-0.00074183	-2.5313	-0.001621	-3.6898	-0.0023628	640.3594398218631	99.341	2.5092	99.527	98.68	101.19	0.18581					187	58	4	0	0	0	0.72739	1	10413	10413		27.047	2.5281	1	585260	+		59529	28734	39770	39786	67508	67508					0.07959891502764549
TTKLGRKVE	9	Unmodified	_TTKLGRKVE_					0	0	0		ENST00000464335.5_1_22:30795691-30811950:+|nuORF;nc|ENSG00000100003|O76054-4|SEC14L2;ENSG00000100003|ENST00000615189|SEC14L2	ENST00000464335.5_1_22:30795691-30811950:+|nuORF	ENST00000464335.5_1_22:30795691-30811950:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.314208984375	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.76255	1	12167	12167		35.618	0	1	4038100			59530	1783	39771	39787	67509	67509					0.0994112074295117
TTKLKGVS	8	Unmodified	_TTKLKGVS_					0	0	0		ENST00000439119.5_1_22:21389692-21399270:-|nuORF	ENST00000439119.5_1_22:21389692-21399270:-|nuORF	ENST00000439119.5_1_22:21389692-21399270:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2585754394531	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.8347	1	568	568		23.042	6.5693	1	867930			59531	11759	39772	39788	67510	67510					0.07886686385813846
TTKPTVFLASI	11	Unmodified	_TTKPTVFLASI_					0	0	0			REV__ENST00000472031.1_1_17:40118826-40125939:+|nuORF	REV__ENST00000472031.1_1_17:40118826-40125939:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3436279296875	2	589.344989	1176.67542	-0.65438	-0.00038565	-2.8884	-0.0017022	-3.5427	-0.0020879	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.69995	1	10248	10248		31.53	1.2121	1	16804000	+		59532	21951	39773	39789	67511	67511					0.09415427371436635
TTKQEHFPDN	10	Unmodified	_TTKQEHFPDN_					0	0	0		ENSG00000121594|ENST00000264246|CD80	ENSG00000121594|ENST00000264246|CD80	ENSG00000121594|ENST00000264246|CD80	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.7853393554688	2	608.783284	1215.55202	-1.6114	-0.000981	2.7671	0.0016846	1.1557	0.00070357	608.7842044463049	58.895	1.1718	58.929	58.521	59.692	0.033905					46	33	2	0	0	0	0.38353	1	5406	5406		65.465	24.039	1	181870			59533	3190	39774	39790	67512	67512					-0.047138557469679654
TTKQITQVSK	10	Unmodified	_TTKQITQVSK_					0	0	0			REV__ENST00000453838.2_1_1:182928211-182928406:-|nuORF	REV__ENST00000453838.2_1_1:182928211-182928406:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3303833007812	2	567.32987	1132.64519	-1.3957	-0.00079181	1.2535	0.00071113	-0.14221	-8.0679E-05	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.76096	1	9611	9611		41.427	3.6151	1	17338000	+		59534	26916	39775	39791	67513	67513					0.08417068706239661
TTKRGSLSVP	10	Unmodified	_TTKRGSLSVP_					0	0	0			REV__ENST00000356554.7_1_1:117910409-117910514:+|nuORF	REV__ENST00000356554.7_1_1:117910409-117910514:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.303466796875	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.8545	1	10426	10426		36.447	4.4919	1	13160000	+		59535	25391	39776	39792	67514	67514					0.07224530363305348
TTKRPKLDS	9	Unmodified	_TTKRPKLDS_					0	0	0			REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3034057617188	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.7932	1	9511	9511		26.693	1.1189	1	13080000	+		59536	18445	39777	39793	67515	67515					0.07224530363282611
TTKRPKLDS	9	Unmodified	_TTKRPKLDS_					0	0	0			REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3033447265625	2	523.303655	1044.59276	1.1688	0.00061163	-1.3622	-0.00071286	-0.19344	-0.00010123	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.76764	1	9011	9011		34.173	3.6689	1	12580000	+		59537	18445	39777	39793	67516	67516					0.07224530363282611
TTKRPKLDS	9	Unmodified	_TTKRPKLDS_					0	0	0			REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3033447265625	2	523.303655	1044.59276	-0.178	-9.3149E-05	-0.24214	-0.00012672	-0.42015	-0.00021986	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.77696	1	8465	8465		31.53	1.2121	1	4158500	+		59538	18445	39777	39793	67517	67517					0.07224530363282611
TTKRPKLDS	9	Unmodified	_TTKRPKLDS_					0	0	0			REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3036499023438	2	523.303655	1044.59276	-0.1734	-9.0741E-05	-0.15994	-8.3699E-05	-0.33334	-0.00017444	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.69624	2	8993	8658;8993		40.778	7.298	1	13808000	+		59539	18445	39777	39793	67518;67519	67519					0.07224530363282611
TTKRPKLDS	9	Unmodified	_TTKRPKLDS_					0	0	0			REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.76255	1	8907	8907		35.618	2.1027	1	12189000	+		59540	18445	39777	39793	67520	67520					0.07224530363282611
TTKRPKLDS	9	Unmodified	_TTKRPKLDS_					0	0	0			REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035278320312	2	523.303655	1044.59276	-1.5391	-0.00080541	1.6494	0.00086314	0.11031	5.7726E-05	523.3043931360254	91.382	2.3991	91.563	91.237	93.636	0.18029					145	56	4	0	0	0	0.7932	1	9138	9138		25.574	1.3713	1	1040100	+		59541	18445	39777	39793	67521	67521					0.07224530363282611
TTKRPKLDS	9	Unmodified	_TTKRPKLDS_					0	0	0			REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	REV__ENST00000573823.5_1_17:55055520-55064652:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.303466796875	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.78528	1	10390	10390		29.17	1.0886	1	13160000	+		59542	18445	39777	39793	67522	67522					0.07224530363282611
TTKSVEVK	8	Unmodified	_TTKSVEVK_					0	0	0			REV__ENSG00000166833|ENST00000349880|NAV2	REV__ENSG00000166833|ENST00000349880|NAV2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	445.6360778808594	2	446.260925	890.507297	0.18309	8.1704E-05	-0.38237	-0.00017064	-0.19929	-8.8934E-05	446.2604565676686	38.022	1.2969	38.117	37.592	38.889	0.094322					98	44	3	0	0	0	0.4196	1	2187	2187		6.3127	0	1	436040	+		59543	21328	39778	39794	67523	67523					0.05766365177623811
TTLADAIIL	9	Unmodified	_TTLADAIIL_					0	0	0		ENSG00000103326|ENST00000219611|CAPN15;ENST00000565010.1_1_16:602435-603513:+|nuORF	ENSG00000103326|ENST00000219611|CAPN15	ENSG00000103326|ENST00000219611|CAPN15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77777099609375	2	465.778951	929.543348	-1.4399	-0.00067067	-1.5585	-0.00072594	-2.9984	-0.0013966	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.7932	1	7564	7564		26.796	1.3459	1	287800			59544	2074	39779	39795	67524	67524					0.07575822354476713
TTLIFVGRICV	11	Unmodified	_TTLIFVGRICV_					0	0	0			REV__ENSG00000205060|ENST00000378509|SLC35B4	REV__ENSG00000205060|ENST00000378509|SLC35B4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3555297851562	2	611.354834	1220.69511	1.1383	0.00069592	0.67847	0.00041479	1.8168	0.0011107	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.7342	1	9480	9480		25.574	0	1	7316900	+		59545	23537	39780	39796	67525	67525					0.09359480110538243
TTLIILSSF	9	Unmodified	_TTLIILSSF_					0	0	0		ENST00000344423.9_1_8:28205359-28205527:-|nuORF	ENST00000344423.9_1_8:28205359-28205527:-|nuORF	ENST00000344423.9_1_8:28205359-28205527:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.7952575683594	2	497.794601	993.574648	-1.2593	-0.00062688	4.012	0.0019971	2.7527	0.0013703	497.79616758279207	48.708	1.9058	48.709	47.99	49.896	0.00017166					121	43	4	0	0	0	0.78536	1	4039	4039		29.15	2.3535	1	500820			59546	10293	39781	39797	67526	67526					0.0776039538857276
TTLKESKVDKS	11	Unmodified	_TTLKESKVDKS_					0	0	0			REV__nc|ENSG00000122257|Q7Z6E9-2|RBBP6	REV__nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	618.3460083007812	2	618.345717	1234.67688	-1.2296	-0.00076029	1.5531	0.00096034	0.32352	0.00020005	618.3465539597456	97.787	3.3462	97.982	96.915	100.26	0.19585					219	77	4	0	0	0	0.69248	1	10205	10205		32.751	3.5805	1	806570	+		59547	18486	39782	39798	67527	67527					0.06893016669528151
TTLKSTPK	8	Unmodified	_TTLKSTPK_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2635192871094	2	438.263468	874.512382	-1.9277	-0.00084486	1.7708	0.00077609	-0.1569	-6.8765E-05	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.88185	1	2114	2114		32.812	3.6629	1	3507500			59548	5183	39783	39799	67528	67528					0.07010669040244011
TTLKSTPK	8	Unmodified	_TTLKSTPK_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2622985839844	2	438.263468	874.512382	-1.8646	-0.00081717	1.0768	0.00047194	-0.78773	-0.00034523	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.87064	1	2728	2728		29.15	3.5755	1	3384400			59549	5183	39783	39799	67529	67529					0.07010669040244011
TTLKSTPK	8	Unmodified	_TTLKSTPK_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633361816406	2	438.263468	874.512382	-1.2142	-0.00053214	0.66524	0.00029155	-0.54896	-0.00024059	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.84341	1	3277	3277		24.203	2.2429	1	4828000			59550	5183	39783	39799	67530	67530					0.07010669040244011
TTLKSTPK	8	Unmodified	_TTLKSTPK_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.26324462890625	2	438.263468	874.512382	-0.25936	-0.00011367	0.075439	3.3062E-05	-0.18392	-8.0604E-05	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.82658	2	2701	2641;2701		31.53	4.8369	1	2361100			59551	5183	39783	39799	67531;67532	67532					0.07010669040244011
TTLKSTPK	8	Unmodified	_TTLKSTPK_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2635803222656	2	438.263468	874.512382	-1.5833	-0.00069392	1.3713	0.000601	-0.21202	-9.2921E-05	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.89043	1	1998	1998		35.618	2.1027	1	11160000			59552	5183	39783	39799	67533	67533					0.07010669040244011
TTLKSTPK	8	Unmodified	_TTLKSTPK_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26300048828125	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.88601	1	2600	2600		34.173	2.6427	1	21381000			59553	5183	39783	39799	67534	67534					0.07010669040244011
TTLKSTPK	8	Unmodified	_TTLKSTPK_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26214599609375	2	438.263468	874.512382	-2.4769	-0.0010856	0.22797	9.991E-05	-2.249	-0.00098564	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.89494	1	3541	3541		37.159	0	1	246320000			59554	5183	39783	39799	67535	67535					0.07010669040244011
TTLKSTPK	8	Unmodified	_TTLKSTPK_					0	0	0		ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123;ENSG00000152558|ENST00000398136|TMEM123	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	ENST00000529492.5_1_11:102272638-102323261:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2413635253906	2	438.263468	874.512382	-0.26249	-0.00011504	-0.3279	-0.0001437	-0.59039	-0.00025875	438.26309001778105	55.903	1.5468	56.304	55.53	57.076	0.40102					55	38	2	0	0	0	0.4196	1	5759	5759		12.207	0	1	1116200			59555	5183	39783	39799	67536	67536					0.07010669040244011
TTLKTLIWTT	10	Unmodified	_TTLKTLIWTT_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.343017578125	2	589.344989	1176.67542	-0.40075	-0.00023618	-3.0716	-0.0018102	-3.4723	-0.0020464	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.86348	1	9193	9193		31.53	0.96095	1	4112500	+		59556	18287	39784	39800	67537	67537					0.09415427371436635
TTLKTLIWTT	10	Unmodified	_TTLKTLIWTT_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3422241210938	2	589.344989	1176.67542	-0.65315	-0.00038493	-3.1619	-0.0018634	-3.815	-0.0022484	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.86218	1	9770	9770		32.812	4.9302	1	5584100	+		59557	18287	39784	39800	67538	67538					0.09415427371436635
TTLKTLIWTT	10	Unmodified	_TTLKTLIWTT_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.342529296875	2	589.344989	1176.67542	-1.324	-0.00078029	-2.4688	-0.001455	-3.7928	-0.0022353	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.86763	1	9207	9207		26.693	0	1	5946500	+		59558	18287	39784	39800	67539	67539					0.09415427371436635
TTLKTLIWTT	10	Unmodified	_TTLKTLIWTT_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3436279296875	2	589.344989	1176.67542	-1.05	-0.00061881	-2.2542	-0.0013285	-3.3042	-0.0019473	589.3435611680267	91.272	1.3839	91.742	90.644	92.028	0.47068					106	33	4	0	0	0	0.8651	1	10819	10819		25.574	0.12388	1	1967800	+		59559	18287	39784	39800	67540	67540					0.09415427371436635
TTLPAIFI	8	Unmodified	_TTLPAIFI_					0	0	0		ENSG00000121207|ENST00000336356|LRAT;ENST00000502474.5_1_4:155669525-155670285:+|nuORF	ENSG00000121207|ENST00000336356|LRAT	ENSG00000121207|ENST00000336356|LRAT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2620849609375	2	438.265479	874.516405	-1.2142	-0.00053214	-3.9242	-0.0017198	-5.1384	-0.002252	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.86288	1	3478	3478		26.796	5.0938	1	4828000			59560	3168	39785	39801	67541	67541					0.07412758533939723
TTLPKMLAIF	10	Unmodified	_TTLPKMLAIF_					0	0	0		ENSG00000196778|ENST00000641528|OR52K1	ENSG00000196778|ENST00000641528|OR52K1	ENSG00000196778|ENST00000641528|OR52K1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.8352661132812	2	567.833203	1133.65185	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.73	1	15.647	15.147	16.147	-0.083363								0	0	0	0.45132	1	72	72		27.882	4.8398	1				59561	8101	39786	39802	67542	67542					0.09037290333230885
TTLSLSIV	8	Unmodified	_TTLSLSIV_					0	0	0			REV__ENST00000550951.5_1_12:50136245-50136326:+|nuORF	REV__ENST00000550951.5_1_12:50136245-50136326:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25225830078125	2	417.252569	832.490584	-1.8869	-0.00078731	2.3043	0.00096149	0.41744	0.00017418	417.2534083410249	40.313	0.96051	40.32	40.071	41.032	0.0065002					69	34	3	0	0	0	0.86288	1	2571	2571		26.796	0	1	507760	+		59562	28603	39787	39803	67543	67543					0.06763864291690425
TTLSLSIV	8	Unmodified	_TTLSLSIV_					0	0	0			REV__ENST00000550951.5_1_12:50136245-50136326:+|nuORF	REV__ENST00000550951.5_1_12:50136245-50136326:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2527770996094	2	417.252569	832.490584	0.19004	7.9296E-05	0.29237	0.00012199	0.48241	0.00020129	417.25266154969415	40.16	1.5962	40.242	39.962	41.558	0.081345					103	51	3	0	0	0	0.81724	1	2540	2540		14.664	0	1	586280	+		59563	28603	39787	39803	67544	67544					0.06763864291690425
TTLSVSIL	8	Unmodified	_TTLSVSIL_					0	0	0		ENSG00000138085|ENST00000380171|ATRAID;nc|ENSG00000138085|Q6UW56-3|ATRAID;ENST00000472515.1_1_2:27439329-27439813:+|nuORF;nc|ENSG00000138085|Q6UW56-2|ATRAID	ENSG00000138085|ENST00000380171|ATRAID	ENSG00000138085|ENST00000380171|ATRAID	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.25335693359375	2	417.252569	832.490584	0.14587	6.0863E-05	1.2459	0.00051986	1.3918	0.00058073	417.25289166109235	35.368	1.357	35.474	35.11	36.467	0.10604					60	43	2	0	0	0	0.86791	1	1917	1917		28.254	6.5519	1	170260			59564	4268	39788	39804	67545	67545					0.06763864291679056
TTLSVSIL	8	Unmodified	_TTLSVSIL_					0	0	0		ENSG00000138085|ENST00000380171|ATRAID;nc|ENSG00000138085|Q6UW56-3|ATRAID;ENST00000472515.1_1_2:27439329-27439813:+|nuORF;nc|ENSG00000138085|Q6UW56-2|ATRAID	ENSG00000138085|ENST00000380171|ATRAID	ENSG00000138085|ENST00000380171|ATRAID	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2531433105469	2	417.252569	832.490584	0.19004	7.9296E-05	0.29237	0.00012199	0.48241	0.00020129	417.25266154969415	40.16	1.5962	40.242	39.962	41.558	0.081345					103	51	3	0	0	0	0.81548	1	2553	2553		20.482	0	1	586280			59565	4268	39788	39804	67546	67546					0.06763864291679056
TTLSVSIL	8	Unmodified	_TTLSVSIL_					0	0	0		ENSG00000138085|ENST00000380171|ATRAID;nc|ENSG00000138085|Q6UW56-3|ATRAID;ENST00000472515.1_1_2:27439329-27439813:+|nuORF;nc|ENSG00000138085|Q6UW56-2|ATRAID	ENSG00000138085|ENST00000380171|ATRAID	ENSG00000138085|ENST00000380171|ATRAID	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.25335693359375	2	417.252569	832.490584	-0.040205	-1.6776E-05	1.1748	0.00049019	1.1346	0.00047341	417.25296314698	35.536	1.154	35.476	35.254	36.408	-0.060333					58	32	2	0	0	0	0.82464	2	1896	1884;1896		28.254	0	1	236350			59566	4268	39788	39804	67547;67548	67548					0.06763864291679056
TTLTIARV	8	Unmodified	_TTLTIARV_					0	0	0			REV__ENSG00000027644|ENST00000368195|INSRR	REV__ENSG00000027644|ENST00000368195|INSRR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.77142333984375	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.79929	1	2264	2264		18.324	0.062328	1	1151500	+		59567	16264	39789	39805	67549	67549					0.0865437527713766
TTLTMIWVG	9	Oxidation (M)	_TTLTM(Oxidation (M))IWVG_		TTLTM(1)IWVG		TTLTM(44)IWVG	0	0	1			REV__ENSG00000125245|ENST00000397470|GPR18	REV__ENSG00000125245|ENST00000397470|GPR18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.2704467773438	2	519.270435	1036.52632	-0.013689	-7.1083E-06	-0.049301	-2.5601E-05	-0.06299	-3.2709E-05	519.270448197605	74.746	0.7345	75.311	75.008	75.742	0.56458					45	17	4	0	0	0	0.64922	1	8465	8465		44.117	6.9577	1	1212900	+		59568	18630	39790	39806	67550	67550		270			0.009515784770201208
TTLTMIWVG	9	Oxidation (M)	_TTLTM(Oxidation (M))IWVG_					0	0	1			REV__ENSG00000125245|ENST00000397470|GPR18	REV__ENSG00000125245|ENST00000397470|GPR18	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	519.270435	1036.52632	0.19825	0.00010294	-0.82242	-0.00042706	-0.62417	-0.00032411	519.2702688250578	74.926	0.90751	75.317	74.747	75.654	0.3911	0.0030018	-0.00059486	NaN	44.117	44	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	896390	+		59569	18630	39790	39806				270			0.009515784770201208
TTLTMIWVG	9	Oxidation (M)	_TTLTM(Oxidation (M))IWVG_					0	0	1			REV__ENSG00000125245|ENST00000397470|GPR18	REV__ENSG00000125245|ENST00000397470|GPR18	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	519.270435	1036.52632	-0.013689	-7.1083E-06	-0.049301	-2.5601E-05	-0.06299	-3.2709E-05	519.270448197605	74.746	0.7345	75.311	75.008	75.742	0.56458	-0.0030018	0.00020805	NaN	44.117	45	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1212900	+		59570	18630	39790	39806				270			0.009515784770201208
TTLVGTDPDL	10	Unmodified	_TTLVGTDPDL_					0	0	0			REV__ENSG00000166341|ENST00000299441|DCHS1	REV__ENSG00000166341|ENST00000299441|DCHS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3137817382812	2	516.266404	1030.51826	-0.26071	-0.0001346	-0.55858	-0.00028838	-0.81929	-0.00042297	516.2661013388587	99.073	0.90745	99.296	98.877	99.785	0.22262					28	21	2	0	0	0	0.37624	1	10276	10276		56.721	23.205	1	130550	+		59571	21281	39791	39807	67551	67551					0.004217227612343777
TTLVPLIIIL	10	Unmodified	_TTLVPLIIIL_					0	0	0		nc|ENSG00000132932|Q9NTI2-3|ATP8A2;nc|ENSG00000132932|Q9NTI2-1|ATP8A2;ENSG00000132932|ENST00000381655|ATP8A2	nc|ENSG00000132932|Q9NTI2-3|ATP8A2	nc|ENSG00000132932|Q9NTI2-3|ATP8A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.37451171875	2	548.373018	1094.73148	-0.34075	-0.00018686	2.6905	0.0014754	2.3497	0.0012885	548.3743503764852	37.458	2.8397	37.434	36.86	39.7	-0.023975					130	65	3	0	0	0	0.88541	1	2535	2535		11.511	5.1984	1	314410			59572	3842	39792	39808	67552	67552					0.18790680278902983
TTLVPLIIIL	10	Unmodified	_TTLVPLIIIL_					0	0	0		nc|ENSG00000132932|Q9NTI2-3|ATP8A2;nc|ENSG00000132932|Q9NTI2-1|ATP8A2;ENSG00000132932|ENST00000381655|ATP8A2	nc|ENSG00000132932|Q9NTI2-3|ATP8A2	nc|ENSG00000132932|Q9NTI2-3|ATP8A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	548.3740844726562	2	548.373018	1094.73148	0.27438	0.00015046	2.33	0.0012777	2.6044	0.0014282	548.3741056570226	37.106	1.654	37.206	36.174	37.827	0.099277					123	52	3	0	0	0	0.8488	1	2108	2108		17.365	0.89182	1	393850			59573	3842	39792	39808	67553	67553					0.18790680278902983
TTLVTATHTT	10	Unmodified	_TTLVTATHTT_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.279846	1044.54514	-0.041177	-2.1547E-05	-3.7521	-0.0019634	-3.7933	-0.001985	523.7799023767425	88.539	0.23666	88.607	88.516	88.752	0.068161					12	5	3	0	0	0	0.37624	1	9022	9022		25.574	2.0514	1	87688	+		59574	18287	39793	39809	67554	67554					0.02464831372435583
TTLVTATHTT	10	Unmodified	_TTLVTATHTT_					0	0	0			REV__ENSG00000117983|ENST00000529681|MUC5B	REV__ENSG00000117983|ENST00000529681|MUC5B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3033447265625	2	523.279846	1044.54514	1.1792	0.00061705	0.22052	0.0001154	1.3997	0.00073245	523.2787685289933	88.852	0.76711	88.902	88.631	89.398	0.050415					28	17	2	0	0	0	0.37624	1	9167	9167		32.812	20.606	1	70121	+		59575	18287	39793	39809	67555	67555					0.02464831372435583
TTLVVRGQSA	10	Unmodified	_TTLVVRGQSA_					0	0	0		ENST00000565499.1_1_16:21658349-21663919:-|nuORF	ENST00000565499.1_1_16:21658349-21663919:-|nuORF	ENST00000565499.1_1_16:21658349-21663919:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3137817382812	2	516.29583	1030.57711	-0.25898	-0.00013371	3.4953	0.0018046	3.2363	0.0016709	516.297408964089	98.924	0.36574	99.146	98.921	99.287	0.22262					17	8	3	0	0	0	0.37624	1	10276	10276		45.972	0	1	693590			59576	13915	39794	39810	67556	67556					0.0630424384626167
TTLWLCHRRA	10	Unmodified	_TTLWLCHRRA_					0	0	0		ENST00000491400.5_1_6:35254110-35255623:+|nuORF;ENST00000469195.5_3_6:35254110-35258154:+|nuORF;ENST00000229405.8_1_6:35254110-35258558:+|nuORF	ENST00000491400.5_1_6:35254110-35255623:+|nuORF	ENST00000491400.5_1_6:35254110-35255623:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.5608825683594	3	419.560875	1255.66079	-0.39824	-0.00016709	-0.089719	-3.7643E-05	-0.48796	-0.00020473	419.5607134988475	33.033	0.70608	32.978	32.673	33.379	-0.05434					42	17	3	0	0	0	0.86225	1	1995	1995		32.751	0.71641	1	142470			59577	9208	39795	39811	67557	67557					0.04319076742285688
TTLYWVAH	8	Unmodified	_TTLYWVAH_					0	0	0			REV__ENSG00000172572|ENST00000359062|PDE3A	REV__ENSG00000172572|ENST00000359062|PDE3A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2610778808594	2	495.75581	989.497067	-2.5973	-0.0012876	-2.481	-0.00123	-5.0783	-0.0025176	495.7545997084525	41.54	0.41409	41.954	41.823	42.237	0.4139					18	10	2	0	0	0	0.4196	1	3633	3633		14.664	0	1	799310	+		59578	21841	39796	39812	67558	67558					0.0018980224303959403
TTMANKVETL	10	Unmodified	_TTMANKVETL_					0	0	0		ENSG00000100092|ENST00000649765|SH3BP1;nc|ENSG00000100092|Q9Y3L3-2|SH3BP1	ENSG00000100092|ENST00000649765|SH3BP1	ENSG00000100092|ENST00000649765|SH3BP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2899169921875	2	554.289356	1106.56416	-1.2403	-0.00068746	2.3851	0.001322	1.1449	0.00063458	554.290536905902	30.368	0.61901	30.397	30.052	30.671	0.028618					22	13	2	0	0	0	0.86802	1	1984	1984		27.047	2.5281	1	150660			59579	1794	39797	39813	67559	67559					0.015140446718305611
TTNEQDAS	8	Unmodified	_TTNEQDAS_					0	0	0			REV__nc|ENSG00000105662|Q6UUV9-3|CRTC1	REV__nc|ENSG00000105662|Q6UUV9-3|CRTC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	432.2470703125	2	433.180329	864.346105	1.441	0.00062421	-0.56334	-0.00024403	0.87766	0.00038019	433.1802286713261	97.413	1.1418	97.804	97.199	98.341	0.39066					58	27	3	0	0	0	0.4196	1	11821	11821		17.365	0	1	291310	+		59580	17558	39798	39814	67560	67560					-0.09149428926275505
TTNERLQY	8	Unmodified	_TTNERLQY_					0	0	0			REV__chr19:46121531-46123886|29|42.45|0.04|10.09|-|0|None,IGFL3|1	REV__chr19:46121531-46123886|29|42.45|0.04|10.09|-|0|None,IGFL3|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.7559814453125	2	512.756538	1023.49852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.223	1	24.177	23.677	24.677	-0.04598								0	0	0	0.30305	1	925	925		42.396	1.618	1		+		59581	15712	39799	39815	67561	67561					-0.012286084588708945
TTNKDVALHLP	11	Unmodified	_TTNKDVALHLP_					0	0	0			REV__ENSG00000145780|ENST00000274457|FEM1C	REV__ENSG00000145780|ENST00000274457|FEM1C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.55987548828125	3	403.559305	1207.65609	-0.38238	-0.00015431	2.1758	0.00087806	1.7934	0.00072374	403.56005878614496	22.792	0.9348	22.733	22.419	23.353	-0.058668					76	31	3	0	0	0	0.67762	1	747	747		35.178	3.544	1	169720	+		59582	19967	39800	39816	67562	67562					0.060564710805238064
TTNPRQIKPKI	11	Unmodified	_TTNPRQIKPKI_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.59771728515625	3	432.597983	1294.77212	-0.16962	-7.3379E-05	-0.60975	-0.00026378	-0.77937	-0.00033715	432.5976970384716	106.55	1.2774	106.52	105.86	107.13	-0.025146					98	24	5	0	0	0	0.7434	2	11578	11578;11626		22.562	5.3948	1	15884000	+		59583	16914	39801	39817	67563;67564	67563					0.13652414651210165
TTNPRQIKPKI	11	Unmodified	_TTNPRQIKPKI_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.59783935546875	3	432.597983	1294.77212	2.4108	0.0010429	-2.4605	-0.0010644	-0.04966	-2.1483E-05	432.5968710757986	107.1	1.2973	107.13	106.67	107.97	0.035622					60	30	2	0	0	0	0.74763	1	11796	11796		25.892	6.2648	1	18390000	+		59584	16914	39801	39817	67565	67565					0.13652414651210165
TTPALLLF	8	Unmodified	_TTPALLLF_					0	0	0			REV__ENSG00000175189|ENST00000309668|INHBC	REV__ENSG00000175189|ENST00000309668|INHBC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.262939453125	2	438.265479	874.516405	-1.2142	-0.00053214	-3.9242	-0.0017198	-5.1384	-0.002252	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.82464	1	3511	3511		21.702	2.3424	1	4828000	+		59585	22048	39802	39818	67566	67566					0.07412758533951092
TTPILKLMA	9	Unmodified	_TTPILKLMA_					0	0	0		ENSG00000204764|ENST00000523189|RANBP17;ENST00000522533.5_1_5:170395310-170725859:+|nuORF;ENST00000519949.5_1_5:170395310-170725859:+|nuORF;ENST00000389118.8_1_5:170395310-170711609:+|nuORF;ENST00000519256.5_1_5:170585477-170669877:+|nuORF	ENSG00000204764|ENST00000523189|RANBP17;ENST00000519256.5_1_5:170585477-170669877:+|nuORF	ENSG00000204764|ENST00000523189|RANBP17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.3008117675781	2	494.298996	986.583439	1.003	0.00049577	2.6902	0.0013297	3.6931	0.0018255	494.3002402240543	96.954	3.9557	97.359	96.674	100.63	0.40498					299	97	6	0	0	0	0.72402	2	11693	11620;11693		38.806	3.1879	1	25258000			59586	8486;13132	39803	39819	67567;67568	67568					0.08961045753392227
TTPPQKRKRL	10	Unmodified	_TTPPQKRKRL_					0	0	0			REV__ENSG00000204406|ENST00000642680|MBD5	REV__ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.92218017578125	3	408.922689	1223.74624	2.7179	0.0011114	-3.8241	-0.0015638	-1.1062	-0.00045236	408.92110256360985	104.72	4.0561	104.68	103.08	107.14	-0.04039					239	96	4	0	0	0	0.85251	1	11549	11549		25.126	11.618	1	3838400	+		59587	23489	39804	39820	67569	67569					0.1433156519960903
TTPPQKRKRL	10	Unmodified	_TTPPQKRKRL_					0	0	0			REV__ENSG00000204406|ENST00000642680|MBD5	REV__ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.922119140625	3	408.922689	1223.74624	-1.7912	-0.00073246	0.82572	0.00033766	-0.96547	-0.0003948	408.92296036119325	104.35	2.8249	104.52	103.85	106.67	0.17096					215	70	5	0	0	0	0.8505	1	11156	11156		18.531	1.3643	1	5290200	+		59588	23489	39804	39820	67570	67570					0.1433156519960903
TTPPQKRKRL	10	Unmodified	_TTPPQKRKRL_					0	0	0			REV__ENSG00000204406|ENST00000642680|MBD5	REV__ENSG00000204406|ENST00000642680|MBD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	409.257080078125	3	408.922689	1223.74624	-1.9234	-0.00078652	0.84702	0.00034637	-1.0764	-0.00044016	408.9230151046432	104.46	2.832	104.56	103.59	106.42	0.093857					212	70	5	0	0	0	0.85251	1	11093	11093		19.263	5.1767	1	2027500	+		59589	23489	39804	39820	67571	67571					0.1433156519960903
TTPPQVNL	8	Unmodified	_TTPPQVNL_					0	0	0			REV__ENSG00000187492|ENST00000412678|CDHR4	REV__ENSG00000187492|ENST00000412678|CDHR4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.88494873046875	2	435.239993	868.465432	1.0312	0.00044882	0.54603	0.00023766	1.5772	0.00068648	435.2403853835623	28.879	1.0581	28.706	28.091	29.15	-0.17336					33	25	2	0	0	0	0.4196	1	1730	1730		29.15	6.1071	1	129850	+		59590	22917	39805	39821	67572	67572					0.025938094890989305
TTQKVTGRP	9	Unmodified	_TTQKVTGRP_					0	0	0		ENST00000592217.2_1_19:46271832-46273041:+|nuORF	ENST00000592217.2_1_19:46271832-46273041:+|nuORF	ENST00000592217.2_1_19:46271832-46273041:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.30078125	2	494.282723	986.550893	2.3045	0.0011391	2.8995	0.0014332	5.204	0.0025723	494.28459263382115	97.388	0.8848	97.332	97.187	98.072	-0.055542					30	20	2	0	0	0	0.20789	1	10571	10571		42.864	5.7052	1	650800			59591	14286	39806	39822	67573	67573					0.057079746747604077
TTQSHRTIL	9	Unmodified	_TTQSHRTIL_					0	0	0			REV__ENSG00000188153|ENST00000328300|COL4A5	REV__ENSG00000188153|ENST00000328300|COL4A5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.7930297851562	2	528.793455	1055.57236	-1.5408	-0.00081478	1.4151	0.0007483	-0.12571	-6.6474E-05	528.7940819687291	36.232	0.98741	36.232	35.879	36.867	0					58	23	4	0	0	0	0.38563	1	2083	2083		58.782	4.0056	1	756220	+		59592	22980	39807	39823	67574	67574					0.04679359703482078
TTQSHRTIL	9	Unmodified	_TTQSHRTIL_					0	0	0			REV__ENSG00000188153|ENST00000328300|COL4A5	REV__ENSG00000188153|ENST00000328300|COL4A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.7931518554688	2	528.793455	1055.57236	-0.29217	-0.0001545	0.15811	8.361E-05	-0.13405	-7.0887E-05	528.7934265407783	36.279	1.2558	36.223	35.879	37.135	-0.055904					72	27	4	0	0	0	0.17181	1	2431	2431		79.713	4.6693	1	1444600	+		59593	22980	39807	39823	67575	67575					0.04679359703482078
TTRERRSLIL	10	Unmodified	_TTRERRSLIL_					0	0	0		nc|ENSG00000158571|P16118-2|PFKFB1;ENSG00000158571|ENST00000375006|PFKFB1	nc|ENSG00000158571|P16118-2|PFKFB1	nc|ENSG00000158571|P16118-2|PFKFB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.5898132324219	3	415.585966	1243.73607	1.0547	0.00043832	2.5427	0.0010567	3.5974	0.001495	415.58682807929586	33.52	0.75113	33.769	33.434	34.185	0.24914					38	17	4	0	0	0	0.86047	1	2429	2429		22.562	0	1	757800			59594	5489	39808	39824	67576	67576					0.12394957474384682
TTSLLRLR	8	Unmodified	_TTSLLRLR_					0	0	0			REV__ENST00000533637.5_1_11:59540699-59556358:+|nuORF	REV__ENST00000533637.5_1_11:59540699-59556358:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.29754638671875	2	480.303458	958.592364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.541	1	15.599	15.099	16.099	0.057872								0	0	0	0.30478	1	44	44		17.365	0.89182	1		+		59595	28351	39809	39825	67577	67577					0.11141155434086158
TTSRGRRRH	9	Unmodified	_TTSRGRRRH_					0	0	0		nc|ENSG00000284762|O95263-3|PDE8B;nc|ENSG00000284762|O95263-6|PDE8B;nc|ENSG00000284762|O95263-4|PDE8B;ENSG00000113231|ENST00000264917|PDE8B;nc|ENSG00000284762|O95263-2|PDE8B	nc|ENSG00000284762|O95263-3|PDE8B	nc|ENSG00000284762|O95263-3|PDE8B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	564.3156127929688	2	563.818661	1125.62277	0.13512	7.6185E-05	0.25025	0.00014109	0.38537	0.00021728	563.8170322013747	56.004	0.32162	56.035	55.828	56.15	0.030838					12	7	2	0	0	0	0.20789	1	5038	5038		26.693	0	1	77271			59596	2705	39810	39826	67578	67578					0.06498326871860627
TTSRIIPR	8	Unmodified	_TTSRIIPR_					0	0	0			REV__ENST00000409926.2_1_22:25082945-25083062:+|nuORF	REV__ENST00000409926.2_1_22:25082945-25083062:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2877502441406	2	472.287808	942.561064	1.4182	0.00066978	-1.3444	-0.00063493	0.07378	3.4846E-05	472.2870857052479	94.916	4.0442	95.348	94.801	98.845	0.4324					276	97	5	0	0	0	0.89043	1	11502	11502		35.618	0	1	21289000	+		59597	19433	39811	39827	67579	67579					0.0874858239999412
TTSSAQTQ	8	Unmodified	_TTSSAQTQ_					0	0	0		CON__P01045-1;CON__Q2KJ62;CON__P01044-1	CON__P01045-1	CON__P01045-1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1832580566406	2	412.193239	822.371926	2.2922	0.00094483	-0.39683	-0.00016357	1.8954	0.00078126	412.1929898633845	97.957	1.2352	98.342	97.765	99	0.38548					44	29	2	0	0	0	0.4196	1	11833	11833		6.3127	0	1	693430		+	59598	578	39812	39828	67580	67580					-0.04636534683982063
TTSSATKN	8	Unmodified	_TTSSATKN_					0	0	0			REV__ENSG00000119906|ENST00000238961|SLF2	REV__ENSG00000119906|ENST00000238961|SLF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.20379638671875	2	405.203607	808.392661	-0.0495	-2.0058E-05	2.7782	0.0011257	2.7287	0.0011057	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.87479	1	7705	7705		30.504	2.2494	1	162370	+		59599	18384	39813	39829	67581	67581					-0.01919944304324872
TTTDPDKVI	9	Unmodified	_TTTDPDKVI_					0	0	0		nc|ENSG00000183117|Q96PZ7-2|CSMD1;ENSG00000183117|ENST00000635120|CSMD1;nc|ENSG00000183117|Q96PZ7-4|CSMD1;nc|ENSG00000183117|Q96PZ7-3|CSMD1	nc|ENSG00000183117|Q96PZ7-2|CSMD1	nc|ENSG00000183117|Q96PZ7-2|CSMD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.25982666015625	2	495.261122	988.507691	1.1508	0.00056992	-3.3281	-0.0016483	-2.1773	-0.0010783	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.51307	1	2692	2692		51.335	6.8044	1	3842700			59600	7502	39814	39830	67582	67582					0.012977401068042127
TTTECRLGH	9	Unmodified	_TTTECRLGH_					0	0	0		ENST00000492730.1_1_1:207262876-207265203:+|nuORF;nc|ENSG00000123843|P20851-2|C4BPB;ENSG00000123843|ENST00000367078|C4BPB	ENST00000492730.1_1_1:207262876-207265203:+|nuORF	ENST00000492730.1_1_1:207262876-207265203:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.3348693847656	2	509.242741	1016.47093	2.5714	0.0013095	3.9214	0.001997	6.4928	0.0033064	509.244397155587	24.571	0.66748	24.057	23.658	24.326	-0.51365					25	14	3	0	0	0	0.20789	1	1233	1233		17.365	0	1	120020			59601	3292	39815	39831	67583	67583					-0.036648349907295596
TTTECRLGH	9	Unmodified	_TTTECRLGH_					0	0	0		ENST00000492730.1_1_1:207262876-207265203:+|nuORF;nc|ENSG00000123843|P20851-2|C4BPB;ENSG00000123843|ENST00000367078|C4BPB	ENST00000492730.1_1_1:207262876-207265203:+|nuORF	ENST00000492730.1_1_1:207262876-207265203:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	509.242741	1016.47093	0.55979	0.00028507	5.9002	0.0030046	6.46	0.0032897	509.24564812002234	24.613	0.45092	24.285	24.071	24.521	-0.32825	0.11387	0.00063775	NaN	24.203	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	131550			59602	3292	39815	39831							-0.036648349907295596
TTTGDQALEVL	11	Unmodified	_TTTGDQALEVL_					0	0	0		ENST00000566802.5_1_16:74366359-74378726:-|nuORF	ENST00000566802.5_1_16:74366359-74378726:-|nuORF	ENST00000566802.5_1_16:74366359-74378726:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.296142578125	2	574.295693	1146.57683	0.03328	1.9112E-05	-0.57675	-0.00033123	-0.54347	-0.00031211	574.2952518869272	36.991	0.86442	37.273	36.809	37.674	0.28173					44	20	3	0	0	0	0.1837	1	2933	2933		80.455	0.96554	1	475410			59603	13941	39816	39832	67584	67584					0.009407793357240735
TTTGHLIYK	9	Unmodified	_TTTGHLIYK_					0	0	0		nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1;ENSG00000101210|ENST00000217182|EEF1A2	nc|ENSG00000196205|Q5VTE0|EEF1A1P5	nc|ENSG00000196205|Q5VTE0|EEF1A1P5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2868041992188	2	517.287474	1032.5604	-0.41068	-0.00021244	0.413	0.00021364	0.0023192	1.1997E-06	517.2873835452941	28.974	1.0343	28.945	28.57	29.604	-0.029207					51	23	3	0	0	0	0.07589	2	1781	1781;1793		98.629	40.399	1	721940			59604	1914	39817	39833	67585;67586	67585					0.04541742960304873
TTTGHLIYK	9	Unmodified	_TTTGHLIYK_					0	0	0		nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1;ENSG00000101210|ENST00000217182|EEF1A2	nc|ENSG00000196205|Q5VTE0|EEF1A1P5	nc|ENSG00000196205|Q5VTE0|EEF1A1P5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2869873046875	2	517.287474	1032.5604	0.62846	0.0003251	-0.76542	-0.00039594	-0.13696	-7.0847E-05	517.2868742033155	29.141	0.97943	28.968	28.468	29.448	-0.17336					53	22	3	0	0	0	0.21969	3	1810	1810;1822;1835		71.877	27.761	1	793230			59605	1914	39817	39833	67587;67588;67589	67587					0.04541742960304873
TTTGHLIYK	9	Unmodified	_TTTGHLIYK_					0	0	0		nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1;ENSG00000101210|ENST00000217182|EEF1A2	nc|ENSG00000196205|Q5VTE0|EEF1A1P5	nc|ENSG00000196205|Q5VTE0|EEF1A1P5	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	517.287474	1032.5604	-1.7137	-0.00088649	0.17961	9.2909E-05	-1.5341	-0.00079358	517.2866764096301	28.579	0.13446	28.579	28.499	28.634	0	-0.25177	0.000437	NaN	98.629	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11809			59606	1914	39817	39833							0.04541742960304873
TTTHCTSG	8	Unmodified	_TTTHCTSG_					0	0	0			REV__nc|ENSG00000144331|Q569K4-2|ZNF385B	REV__nc|ENSG00000144331|Q569K4-2|ZNF385B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.574951171875	2	404.16871	806.322867	0.55374	0.0002238	4.381	0.0017707	4.9347	0.0019945	404.1702162201783	80.673	0.58517	80.816	80.653	81.238	0.14352					19	13	3	0	0	0	0.4196	1	7692	7692		18.324	0	1	37512	+		59607	19881	39818	39834	67590	67590					-0.08804146244585809
TTTITKKT	8	Unmodified	_TTTITKKT_					0	0	0			REV__nc|ENSG00000116690|Q92954-5|PRG4	REV__nc|ENSG00000116690|Q92954-5|PRG4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7877502441406	2	447.26875	892.522947	-1.063	-0.00047546	-0.5138	-0.00022981	-1.5768	-0.00070527	447.26856298495534	38.463	0.44525	38.805	38.577	39.022	0.34187					21	10	3	0	0	0	0.4196	1	3147	3147		7.1934	0	1	86241	+		59608	18214	39819	39835	67591	67591					0.07238651694672171
TTTLQHHK	8	Unmodified	_TTTLQHHK_					0	0	0		nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP;ENSG00000102931|ENST00000219204|ARL2BP	nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP	nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.23736572265625	2	483.261791	964.509028	-2.8985	-0.0014008	-2.445	-0.0011816	-5.3436	-0.0025824	483.25993740059	39.865	0.56054	39.874	39.557	40.117	0.0092812					16	12	2	0	0	0	0.4196	1	2849	2849		18.324	0	1	123380			59609	2035	39820	39836	67592	67592					0.02535418986235527
TTTTAVKIG	9	Unmodified	_TTTTAVKIG_					0	0	0		nc|ENSG00000099810|Q13126-7|MTAP;nc|ENSG00000099810|Q13126-4|MTAP;ENSG00000099810|ENST00000644715|MTAP;nc|ENSG00000099810|Q13126-6|MTAP;nc|ENSG00000099810|Q13126-5|MTAP;nc|ENSG00000099810|Q13126-3|MTAP;nc|ENSG00000099810|Q13126-2|MTAP	nc|ENSG00000099810|Q13126-7|MTAP	nc|ENSG00000099810|Q13126-7|MTAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	446.259765625	2	446.260925	890.507297	-0.45611	-0.00020354	-0.62987	-0.00028109	-1.086	-0.00048463	446.2604729765141	37.714	2.8181	38.027	36.261	39.079	0.31312					154	69	5	0	0	0	0.78983	1	3008	3008		27.882	3.3631	1	3385700			59610	1767	39821	39837	67593	67593					0.05766365177623811
TTVHERFL	8	Unmodified	_TTVHERFL_					0	0	0			REV__nc|ENSG00000174842|Q92990-2|GLMN	REV__nc|ENSG00000174842|Q92990-2|GLMN	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2904052734375	2	501.771991	1001.52943	-0.92378	-0.00046353	-3.3599	-0.0016859	-4.2837	-0.0021494	501.77052937627036	88.424	2.8348	88.424	87.076	89.91	0					120	65	2	0	0	0	0.4196	1	8703	8703		35.618	11.416	1	92104	+		59611	30044	39822	39838	67594	67594					0.028725896460514377
TTVIIILGCV	10	Unmodified	_TTVIIILGCV_					0	0	0			REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3139038085938	2	516.312103	1030.60965	-0.68072	-0.00035146	4.0405	0.0020861	3.3597	0.0017347	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.86305	3	10030	10030;10078;10135		31.955	1.4512	1	39641000	+		59612	25263	39823	39839	67595;67596;67597	67595					0.09557314924882121
TTVIIILGCV	10	Unmodified	_TTVIIILGCV_					0	0	0			REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3139038085938	2	516.312103	1030.60965	-0.047196	-2.4368E-05	3.3567	0.0017331	3.3095	0.0017087	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.84112	11	10628	10509;10533;10557;10569;10581;10628;10676;10688;10724;10760;10844		37.159	6.6555	1	63062000	+		59613	25263	39823	39839	67598;67599;67600;67601;67602;67603;67604;67605;67606;67607;67608	67603					0.09557314924882121
TTVIIILGCV	10	Unmodified	_TTVIIILGCV_					0	0	0			REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3138427734375	2	516.312103	1030.60965	2.7794	0.001435	0.50073	0.00025853	3.2801	0.0016935	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.81018	3	10815	10767;10815;10923		38.806	3.7006	1	67991000	+		59614	25263	39823	39839	67609;67610;67611	67610					0.09557314924882121
TTVIIILGCV	10	Unmodified	_TTVIIILGCV_					0	0	0			REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.313720703125	2	516.312103	1030.60965	0.87601	0.00045229	2.4044	0.0012414	3.2804	0.0016937	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.86305	2	10600	10600;10720		31.955	1.4512	1	67025000	+		59615	25263	39823	39839	67612;67613	67612					0.09557314924882121
TTVIIILGCV	10	Unmodified	_TTVIIILGCV_					0	0	0			REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3137817382812	2	516.312103	1030.60965	-0.25799	-0.00013321	3.436	0.001774	3.178	0.0016408	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.81018	6	10276	10276;10300;10324;10348;10489;10551		38.806	1.647	1	82226000	+		59616	25263	39823	39839	67614;67615;67616;67617;67618;67619	67614					0.09557314924882121
TTVIIILGCV	10	Unmodified	_TTVIIILGCV_					0	0	0			REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3136596679688	2	516.312103	1030.60965	-0.25527	-0.0001318	4.18	0.0021582	3.9248	0.0020264	516.3141964907301	102.01	1.1313	102.2	101.89	103.02	0.19484					90	27	4	0	0	0	0.86452	1	10755	10755		30.504	0	1	1199700	+		59617	25263	39823	39839	67620	67620					0.09557314924882121
TTVIIILGCV	10	Unmodified	_TTVIIILGCV_					0	0	0			REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3142700195312	2	516.312103	1030.60965	0.80556	0.00041592	2.4849	0.001283	3.2904	0.0016989	516.3134092528046	99.097	3.5463	99.254	98.454	102	0.15659					347	83	5	0	0	0	0.777	7	10556	10267;10291;10315;10339;10411;10495;10556		40.573	10.069	1	72906000	+		59618	25263	39823	39839	67621;67622;67623;67624;67625;67626;67627	67627					0.09557314924882121
TTVIIILGCV	10	Unmodified	_TTVIIILGCV_					0	0	0			REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	REV__ENST00000341567.8_1_7:66420943-66421105:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.314208984375	2	516.312103	1030.60965	1.791	0.00092474	1.8914	0.00097654	3.6824	0.0019013	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.67608	2	12024	11964;12024		45.952	8.7928	1	24820000	+		59619	25263	39823	39839	67628;67629	67629					0.09557314924882121
TTVKVPGKRLP	11	Unmodified	_TTVKVPGKRLP_					0	0	0		nc|ENSG00000133612|Q96P47-5|AGAP3;nc|ENSG00000133612|Q96P47|AGAP3;nc|ENSG00000133612|Q96P47-2|AGAP3;ENSG00000133612|ENST00000397238|AGAP3;ENST00000478320.1_1_7:150825672-150834824:+|nuORF	nc|ENSG00000133612|Q96P47-5|AGAP3	nc|ENSG00000133612|Q96P47-5|AGAP3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.3821411132812	2	598.379697	1194.74484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.258	1	44.234	43.734	44.734	-0.023079								0	0	0	0.56276	1	3423	3423		23.523	1.8369	1				59620	3883	39824	39840	67630	67630					0.15525931110846614
TTVLLLATP	9	Unmodified	_TTVLLLATP_					0	0	0			REV__ENSG00000174885|ENST00000534750|NLRP6	REV__ENSG00000174885|ENST00000534750|NLRP6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.79046630859375	2	464.789318	927.564084	-0.5794	-0.0002693	3.5758	0.001662	2.9964	0.0013927	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.72402	1	2152	2152		38.806	6.8513	1	409180	+		59621	22021	39825	39841	67631	67631					0.09740412734140591
TTVLVVPF	8	Unmodified	_TTVLVVPF_					0	0	0		ENST00000503862.5_3_4:108746377-108829880:+|nuORF	ENST00000503862.5_3_4:108746377-108829880:+|nuORF	ENST00000503862.5_3_4:108746377-108829880:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2633056640625	2	438.265479	874.516405	-1.0936	-0.00047928	-3.4121	-0.0014954	-4.5057	-0.0019747	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.86288	1	2783	2783		26.796	6.3143	1	2862500			59622	12894	39826	39842	67632	67632					0.07412758533951092
TTVTKVVK	8	Unmodified	_TTVTKVVK_					0	0	0			REV__nc|ENSG00000198561|O60716-24|CTNND1	REV__nc|ENSG00000198561|O60716-24|CTNND1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2398376464844	2	438.28166	874.548768	0.61774	0.00027074	3.3502	0.0014683	3.9679	0.0017391	438.283343270601	55.739	0.16486	56.299	56.189	56.354	0.55954					5	3	2	0	0	0	0.4196	1	5744	5744		7.6903	0	1	138780	+		59623	23340	39827	39843	67633	67633					0.1064754593694488
TTVTKVVK	8	Unmodified	_TTVTKVVK_					0	0	0			REV__nc|ENSG00000198561|O60716-24|CTNND1	REV__nc|ENSG00000198561|O60716-24|CTNND1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.26336669921875	2	438.28166	874.548768	1.4905	0.00065327	1.4207	0.00062268	2.9113	0.0012759	438.28228496423213	34.811	0.23405	35.192	34.977	35.211	0.3812					9	5	2	0	0	0	0.4196	1	2617	2617		25.574	0	1	430800	+		59624	23340	39827	39843	67634	67634					0.1064754593694488
TTVTLSPVL	9	Unmodified	_TTVTLSPVL_					0	0	0			REV__nc|ENSG00000078403|P55197-1|MLLT10	REV__nc|ENSG00000078403|P55197-1|MLLT10	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7777404785156	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.408	1	79.539	79.039	80.039	0.13086								0	0	0	0.2969	1	7529	7529		31.955	0	1		+		59625	16764	39828	39844	67635	67635					0.07575822354476713
TTVVHNATD	9	Unmodified	_TTVVHNATD_					0	0	0		nc|ENSG00000148660|Q13555-5|CAMK2G;nc|ENSG00000148660|Q13555-7|CAMK2G;ENST00000472912.5_1_10:75578585-75620616:-|nuORF;ENSG00000148660|ENST00000423381|CAMK2G;nc|ENSG00000148660|Q13555-6|CAMK2G;nc|ENSG00000148660|Q13555|CAMK2G;nc|ENSG00000148660|Q13555-10|CAMK2G;nc|ENSG00000148660|Q13555-8|CAMK2G;nc|ENSG00000148660|Q13555-2|CAMK2G;nc|ENSG00000148660|Q13555-9|CAMK2G;nc|ENSG00000148660|Q13555-3|CAMK2G;nc|ENSG00000148660|Q13555-11|CAMK2G;nc|ENSG00000148660|Q13555-4|CAMK2G;ENST00000474131.5_1_10:75577276-75601951:-|nuORF	nc|ENSG00000148660|Q13555-5|CAMK2G	nc|ENSG00000148660|Q13555-5|CAMK2G	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.23431396484375	2	479.235439	956.456324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.575	1	16.551	16.051	17.051	-0.024035								0	0	0	0.32159	1	160	160		23.042	0	1				59626	4975	39829	39845	67636	67636					-0.023645838672450736
TTVVSLTS	8	Unmodified	_TTVVSLTS_					0	0	0			REV__ENST00000531840.1_1_11:2417741-2417828:+|nuORF	REV__ENST00000531840.1_1_11:2417741-2417828:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2397155761719	2	404.226551	806.438549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.663	1	27.692	27.192	28.192	0.02817								0	0	0	0.29568	1	1113	1113		35.201	1.6851	1		+		59627	28314	39830	39846	67637	67637					0.027587008779164535
TTVVSTLL	8	Unmodified	_TTVVSTLL_					0	0	0		ENSG00000167769|ENST00000301452|ACER1	ENSG00000167769|ENST00000301452|ACER1	ENSG00000167769|ENST00000301452|ACER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2521667480469	2	417.252569	832.490584	0.19004	7.9296E-05	0.29237	0.00012199	0.48241	0.00020129	417.25266154969415	40.16	1.5962	40.242	39.962	41.558	0.081345					103	51	3	0	0	0	0.81548	1	2563	2563		20.482	0	1	586280			59628	6329	39831	39847	67638	67638					0.06763864291679056
TTYNMYPK	8	Unmodified	_TTYNMYPK_					0	0	0			REV__ENSG00000173681|ENST00000379682|BCLAF3	REV__ENSG00000173681|ENST00000379682|BCLAF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2390441894531	2	509.239135	1016.46372	-0.12162	-6.1934E-05	3.2123	0.0016358	3.0907	0.0015739	509.2406534616815	38.33	2.3682	38.852	38.473	40.841	0.52236					103	56	2	0	0	0	0.90983	1	3341	3341		42.396	0.96952	1	906030	+		59629	21944	39832	39848	67639	67639					-0.04385567591180006
TVADDPGLP	9	Unmodified	_TVADDPGLP_					0	0	0			REV__ENST00000496333.5_1_2:24714789-24715008:+|nuORF	REV__ENST00000496333.5_1_2:24714789-24715008:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.72320556640625	2	442.721633	883.428712	0.37013	0.00016386	1.948	0.00086243	2.3181	0.0010263	442.7222188277578	27.775	1.2287	27.811	27.475	28.704	0.03607					60	39	2	0	0	0	0.77546	1	1297	1297		31.955	7.4508	1	168890	+		59630	27749	39833	39849	67640	67640					-0.017664871274746474
TVAGSSRVK	9	Unmodified	_TVAGSSRVK_					0	0	0		ENST00000542678.5_2_12:123463475-123463976:-|nuORF	ENST00000542678.5_2_12:123463475-123463976:-|nuORF	ENST00000542678.5_2_12:123463475-123463976:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	452.7644348144531	2	452.764166	903.513779	0.20505	9.2837E-05	-1.8294	-0.00082828	-1.6243	-0.00073545	452.7633107571631	39.557	0.6575	39.646	39.396	40.053	0.088375					30	16	2	0	0	0	0.6204	1	2438	2438		45.972	5.1941	1	150760			59631	13539	39834	39850	67641	67641					0.058163031289950595
TVAGSSRVK	9	Unmodified	_TVAGSSRVK_					0	0	0		ENST00000542678.5_2_12:123463475-123463976:-|nuORF	ENST00000542678.5_2_12:123463475-123463976:-|nuORF	ENST00000542678.5_2_12:123463475-123463976:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	452.764166	903.513779	-0.049026	-2.2197E-05	-1.5784	-0.00071463	-1.6274	-0.00073683	452.7632996887264	39.64	0.66145	39.592	39.271	39.932	-0.04789	-0.080531	-0.00063896	NaN	45.972	35	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	184140			59632	13539	39834	39850							0.058163031289950595
TVAPAVRGSN	10	Unmodified	_TVAPAVRGSN_					0	0	0		ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1	ENSG00000139641|ENST00000394048|ESYT1	ENSG00000139641|ENST00000394048|ESYT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.26690673828125	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.8545	1	8619	8619		36.447	6.129	1	1702800			59633	4386	39835	39851	67642	67642					0.033154016406683695
TVASHHIR	8	Unmodified	_TVASHHIR_					0	0	0		nc|ENSG821|P63135|ERVK-7_pol;nc|ENSG819|P61567|ERVK-7_env;nc|ENSG849|O42043|ERVK-18_env;nc|ENSG825|Q69384|ERVK-6_env;nc|ENSG802|Q902F9|HERVK_113_env;nc|ENSG815|Q902F8|ERVK-8_env;nc|ENSG811|Q9UKH3|ERVK-9_env;nc|ENSG840|P61565|ERVK-21_env;nc|ENSG833|P61570|ERVK-25_env;nc|ENSG836|P61566|ERVK-24_env;nc|ENSG845|O71037|ERVK-19_env	nc|ENSG821|P63135|ERVK-7_pol	nc|ENSG821|P63135|ERVK-7_pol	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	460.7553405761719	2	460.756675	919.498798	-1.3941	-0.00064235	0.14404	6.6367E-05	-1.2501	-0.00057599	460.75667062926294	29.467	0.51919	29.438	29.214	29.733	-0.029207					19	11	2	0	0	0	0.89962	1	1858	1858		38.806	0	1	196500			59634	15361	39836	39852	67643	67643					0.03582856051673389
TVASSKKL	8	Unmodified	_TVASSKKL_					0	0	0			REV__nc|ENSG00000158486|Q8TD57|DNAH3	REV__nc|ENSG00000158486|Q8TD57|DNAH3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2580261230469	2	417.258185	832.501818	1.2458	0.00051983	-0.79766	-0.00033283	0.44816	0.000187	417.2577724743859	22.545	2.9606	22.126	21.787	24.747	-0.41879					135	67	3	0	0	0	0.83646	1	992	992		12.207	0.69583	1	1763000	+		59635	29959	39837	39853	67644	67644					0.07886686385825215
TVAVPLVGK	9	Unmodified	_TVAVPLVGK_					0	0	0		nc|ENSG00000136986|Q9BUN8-2|DERL1;ENSG00000136986|ENST00000259512|DERL1	nc|ENSG00000136986|Q9BUN8-2|DERL1	nc|ENSG00000136986|Q9BUN8-2|DERL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2840576171875	2	442.284203	882.553853	-0.28047	-0.00012405	0.52017	0.00023006	0.23971	0.00010602	442.2843559341612	47.977	1.5239	48.901	48.466	49.989	0.92315					80	37	4	0	0	0	0.71772	1	4599	4599		39.253	10.103	1	2499800			59636	4166	39838	39854	67645	67645					0.10787849799567084
TVAVPLVGKL	10	Unmodified	_TVAVPLVGKL_					0	0	0		nc|ENSG00000136986|Q9BUN8-2|DERL1;ENSG00000136986|ENST00000259512|DERL1	nc|ENSG00000136986|Q9BUN8-2|DERL1	nc|ENSG00000136986|Q9BUN8-2|DERL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.82635498046875	2	498.826235	995.637917	0.14101	7.0337E-05	-0.57634	-0.00028749	-0.43533	-0.00021716	498.8258184958068	67.735	1.3923	68.119	67.633	69.025	0.38483					74	33	3	0	0	0	0.2575	2	7430	7401;7430		77.318	3.0625	1	716250			59637	4166	39839	39855	67646;67647	67647					0.13992380896468148
TVCVPKTRSV	10	Unmodified	_TVCVPKTRSV_					0	0	0			REV__ENST00000529480.1_1_11:57449149-57455980:+|nuORF	REV__ENST00000529480.1_1_11:57449149-57455980:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3054809570312	2	545.307884	1088.60121	-1.6469	-0.00089805	0.70703	0.00038555	-0.93983	-0.0005125	545.3082629607538	58.104	0.66236	58.498	58.196	58.859	0.39408					25	15	2	0	0	0	0.2953	1	6077	6077		72.879	9.573	1	276650	+		59638	28268	39840	39856	67648	67648					0.060457610082494284
TVCVPKTRSV	10	Unmodified	_TVCVPKTRSV_					0	0	0			REV__ENST00000529480.1_1_11:57449149-57455980:+|nuORF	REV__ENST00000529480.1_1_11:57449149-57455980:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	545.307884	1088.60121	-1.6469	-0.00089805	0.70703	0.00038555	-0.93983	-0.0005125	545.3082629607538	58.104	0.66236	58.498	58.196	58.859	0.39408	-0.037091	0.00061093	NaN	72.879	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	276650	+		59639	28268	39840	39856							0.060457610082494284
TVDLPKSPK	9	Unmodified	_TVDLPKSPK_					0	0	0		nc|ENSG00000172673|Q8N1K5-3|THEMIS;nc|ENSG00000172673|Q8N1K5-2|THEMIS;ENSG00000172673|ENST00000368248|THEMIS;nc|ENSG00000172673|Q8N1K5-4|THEMIS	nc|ENSG00000172673|Q8N1K5-3|THEMIS	nc|ENSG00000172673|Q8N1K5-3|THEMIS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.7904052734375	2	492.78985	983.565146	-0.8454	-0.0004166	0.47146	0.00023233	-0.37394	-0.00018427	492.7897090609867	31.851	0.9009	31.977	31.431	32.332	0.12642					44	20	3	0	0	0	0.39367	1	2189	2189		58.23	10.573	1	226950			59640	6782	39841	39857	67649	67649					0.07270627103048355
TVELGKSFVST	11	Unmodified	_TVELGKSFVST_					0	0	0			REV__ENSG00000153404|ENST00000637938|PLEKHG4B	REV__ENSG00000153404|ENST00000637938|PLEKHG4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.3177490234375	2	584.316428	1166.6183	-0.24339	-0.00014221	0.82857	0.00048415	0.58518	0.00034193	584.316852294161	68.772	0.549	68.736	68.558	69.107	-0.036301					30	19	2	0	0	0	0.67778	1	6650	6650		35.152	2.3396	1	104620	+		59641	20348	39842	39858	67650	67650					0.04165960095042465
TVEPDAIKP	9	Unmodified	_TVEPDAIKP_					0	0	0		nc|ENSG00000170558|P19022-2|CDH2;ENSG00000170558|ENST00000269141|CDH2	nc|ENSG00000170558|P19022-2|CDH2	nc|ENSG00000170558|P19022-2|CDH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2605285644531	2	485.266207	968.517862	-2.0518	-0.00099565	0.052784	2.5614E-05	-1.999	-0.00097004	485.2661299118407	43.069	1.5352	43.843	43.54	45.075	0.7738					84	37	4	0	0	0	0.30689	1	3908	3908		64.207	7.4862	1	9449200			59642	6601	39843	39859	67651	67651					0.0323434783203993
TVEPTPGKGP	10	Unmodified	_TVEPTPGKGP_					0	0	0		nc|ENSG00000143924|Q9HC35-2|EML4;ENSG00000143924|ENST00000318522|EML4;ENST00000406175.3_1_2:42513330-42557344:+|nuORF	nc|ENSG00000143924|Q9HC35-2|EML4	nc|ENSG00000143924|Q9HC35-2|EML4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.76611328125	2	491.763832	981.513111	-0.7856	-0.00038633	0.37534	0.00018458	-0.41026	-0.00020175	491.76404017316463	63.827	0.57457	63.857	63.658	64.233	0.030243					42	23	2	0	0	0	0.80179	1	5602	5602		39.253	0	1	123660			59643	4676	39844	39860	67652	67652					0.021614636892991257
TVEVDALAKL	10	Unmodified	_TVEVDALAKL_					0	0	0			REV__ENSG00000172009|ENST00000307741|THOP1	REV__ENSG00000172009|ENST00000307741|THOP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.2728881835938	2	529.808239	1057.60193	0.60463	0.00032034	-0.61536	-0.00032602	-0.01073	-5.6848E-06	529.8078215835142	75.531	0.60892	75.665	75.435	76.044	0.13325					40	16	3	0	0	0	0.37624	1	7049	7049		64.207	14.766	1	215340	+		59644	21796	39845	39861	67653	67653					0.0754287892893899
TVEYTKTK	8	Unmodified	_TVEYTKTK_					0	0	0		ENST00000577104.1_1_17:52555182-52555515:+|nuORF	ENST00000577104.1_1_17:52555182-52555515:+|nuORF	ENST00000577104.1_1_17:52555182-52555515:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.26544189453125	2	485.266207	968.517862	-2.0518	-0.00099565	0.052784	2.5614E-05	-1.999	-0.00097004	485.2661299118407	43.069	1.5352	43.843	43.54	45.075	0.7738					84	37	4	0	0	0	0.90837	1	3901	3901		56.721	1.2168	1	9449200			59645	14063	39846	39862	67654	67654					0.03234347832062667
TVFNLGVYR	9	Unmodified	_TVFNLGVYR_					0	0	0		ENST00000411990.6_1_1:207235951-207252361:+|nuORF	ENST00000411990.6_1_1:207235951-207252361:+|nuORF	ENST00000411990.6_1_1:207235951-207252361:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	534.7951049804688	2	534.795466	1067.57638	-1.6021	-0.00085681	1.5908	0.00085076	-0.011304	-6.0455E-06	534.7961451235103	29.642	3.4749	29.642	28.953	32.428	0					302	131	4	0	0	0	0.7932	1	1377	1377		23.042	2.0956	1	542890			59646	11331	39847	39863	67655	67655					0.045294491971844764
TVGCRAPVV	9	Unmodified	_TVGCRAPVV_					0	0	0			REV__ENSG00000157764|ENST00000646891|BRAF	REV__ENSG00000157764|ENST00000646891|BRAF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7505187988281	2	451.249837	900.485122	-0.24052	-0.00010853	-1.8762	-0.00084665	-2.1168	-0.00095518	451.24888516204976	65.538	1.2999	65.566	64.989	66.289	0.027321					98	67	2	0	0	0	0.74721	1	6213	6213		37.159	6.6555	1	846940	+		59647	20561	39848	39864	67656	67656					0.0308986222820522
TVGCRAPVV	9	Unmodified	_TVGCRAPVV_					0	0	0			REV__ENSG00000157764|ENST00000646891|BRAF	REV__ENSG00000157764|ENST00000646891|BRAF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	451.249837	900.485122	-0.88206	-0.00039803	-1.343	-0.00060603	-2.2251	-0.0010041	451.24922716288046	65.173	0.72722	65.559	64.991	65.719	0.38615	-0.11658	0.00010241	NaN	37.159	30	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83334	+		59648	20561	39848	39864							0.0308986222820522
TVGCRAPVV	9	Unmodified	_TVGCRAPVV_					0	0	0			REV__ENSG00000157764|ENST00000646891|BRAF	REV__ENSG00000157764|ENST00000646891|BRAF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	451.249837	900.485122	0.12712	5.7362E-05	-2.5841	-0.0011661	-2.457	-0.0011087	451.248612551223	65.087	0.88051	65.641	64.896	65.776	0.55386	-0.034961	-0.0010177	NaN	37.159	32	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88677	+		59649	20561	39848	39864							0.0308986222820522
TVGFIALL	8	Unmodified	_TVGFIALL_					0	0	0		ENSG00000166391|ENST00000198801|MOGAT2;nc|ENSG00000166391|Q3SYC2-3|MOGAT2	ENSG00000166391|ENST00000198801|MOGAT2	ENSG00000166391|ENST00000198801|MOGAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2581787109375	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.83466	1	529	529		23.037	1.3344	1	679020			59650	6188	39849	39865	67657	67657					0.08288775879520927
TVGLYNKAIGH	11	Unmodified	_TVGLYNKAIGH_					0	0	0		ENST00000542123.5_1_12:12976812-12977058:+|nuORF	ENST00000542123.5_1_12:12976812-12977058:+|nuORF	ENST00000542123.5_1_12:12976812-12977058:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	586.8237915039062	2	586.824755	1171.63496	-0.73461	-0.00043109	-0.96132	-0.00056413	-1.6959	-0.00099522	586.8240526511282	110.44	1.1405	110.38	110.12	111.26	-0.055084					146	40	5	0	0	0	0.69995	1	12007	12007		31.53	3.6476	1	9161800			59651	13527	39850	39866	67658	67658					0.05600505771644748
TVGLYNKAIGH	11	Unmodified	_TVGLYNKAIGH_					0	0	0		ENST00000542123.5_1_12:12976812-12977058:+|nuORF	ENST00000542123.5_1_12:12976812-12977058:+|nuORF	ENST00000542123.5_1_12:12976812-12977058:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	586.8238525390625	2	586.824755	1171.63496	-1.3322	-0.00078178	-0.15529	-9.1126E-05	-1.4875	-0.0008729	586.8245139842418	110.15	1.3506	110.15	109.98	111.33	0.0060501					111	48	4	0	0	0	0.69995	1	11729	11729		31.53	2.3598	1	5492600			59652	13527	39850	39866	67659	67659					0.05600505771644748
TVGSETTTAY	10	Unmodified	_TVGSETTTAY_					0	0	0		ENSG00000261272|ENST00000561890|MUC22	ENSG00000261272|ENST00000561890|MUC22	ENSG00000261272|ENST00000561890|MUC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	515.2402954101562	2	515.240386	1028.46622	-0.37021	-0.00019075	0.34586	0.0001782	-0.02435	-1.2546E-05	515.2404361126636	47.52	0.54141	47.539	47.235	47.776	0.018967					38	17	3	0	0	0	0.31414	1	3548	3548		71.296	0	1	721160			59653	8924	39851	39867	67660	67660					-0.04687440652537589
TVGTAQPKQ	9	Unmodified	_TVGTAQPKQ_					0	0	0		ENSG00000165156|ENST00000395571|ZHX1	ENSG00000165156|ENST00000395571|ZHX1	ENSG00000165156|ENST00000395571|ZHX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.2560119628906	2	465.256174	928.497795	2.2316	0.0010382	-2.0675	-0.00096192	0.16404	7.6322E-05	465.25495879925415	26.009	1.3902	25.578	25.068	26.458	-0.4311					76	31	4	0	0	0	0.15959	1	1399	1399		82.241	5.3939	1	1215300			59654	6052	39852	39868	67661	67661					0.03068596892092046
TVGVLVVVEP	10	Unmodified	_TVGVLVVVEP_					0	0	0			REV__nc|ENSG00000166762|Q96P56-3|CATSPER2	REV__nc|ENSG00000166762|Q96P56-3|CATSPER2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3102722167969	2	506.307875	1010.6012	-0.4302	-0.00021782	2.8218	0.0014287	2.3916	0.0012109	506.3092413243001	54.85	1.3019	54.801	54.615	55.917	-0.049271					56	42	2	0	0	0	0.77314	1	4662	4662		40.778	3.6191	1	188390	+		59655	21316	39853	39869	67662	67662					0.09632084279905939
TVGVLVVVEP	10	Unmodified	_TVGVLVVVEP_					0	0	0			REV__nc|ENSG00000166762|Q96P56-3|CATSPER2	REV__nc|ENSG00000166762|Q96P56-3|CATSPER2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3102111816406	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.778	1	50.686	50.186	51.186	-0.091797								0	0	0	0.45132	1	4010	4010		20.947	0	1		+		59656	21316	39853	39869	67663	67663					0.09632084279905939
TVHGVEFDF	9	Unmodified	_TVHGVEFDF_					0	0	0		nc|ENSG00000135069|Q9Y617-2|PSAT1;ENSG00000135069|ENST00000376588|PSAT1	nc|ENSG00000135069|Q9Y617-2|PSAT1	nc|ENSG00000135069|Q9Y617-2|PSAT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.7820434570312	2	525.748182	1049.48181	-0.86435	-0.00045443	-0.62419	-0.00032817	-1.4885	-0.00078259	525.7472029684866	47.225	0.48433	48.148	47.871	48.356	0.92315					19	11	3	0	0	0	0.20789	1	4477	4477		31.955	7.7521	1	570560			59657	3980	39854	39870	67664	67664					-0.04095109344825687
TVHIDLSALN	10	Unmodified	_TVHIDLSALN_					0	0	0		ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-2|MET	ENSG00000105976|ENST00000397752|MET	ENSG00000105976|ENST00000397752|MET	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.2761840820312	2	541.795663	1081.57677	-0.099095	-5.3689E-05	-0.94064	-0.00050964	-1.0397	-0.00056333	541.7951396938795	54.769	0.75454	55.176	54.907	55.661	0.40663					27	17	2	0	0	0	0.37624	1	5611	5611		23.523	0	1	471000			59658	2269	39855	39871	67665	67665					0.03924824126374915
TVHLAMSIRLC	11	Unmodified	_TVHLAMSIRLC_					0	0	0		ENST00000215917.11_2_22:26887952-26888063:+|nuORF	ENST00000215917.11_2_22:26887952-26888063:+|nuORF	ENST00000215917.11_2_22:26887952-26888063:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	622.3363647460938	2	622.336118	1242.65768	0.74466	0.00046343	-0.14257	-8.8726E-05	0.60209	0.0003747	622.3359336056161	110.94	1.6886	110.97	110.28	111.96	0.031738					155	57	4	0	0	0	0.73621	1	12168	12168		2.7184	0	1	299380			59659	9123	39856	39872	67666	67666					0.04606065573284468
TVHTSYGPI	9	Unmodified	_TVHTSYGPI_					0	0	0		ENSG00000189227|ENST00000342683|C15orf61	ENSG00000189227|ENST00000342683|C15orf61	ENSG00000189227|ENST00000342683|C15orf61	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.2720031738281	2	487.750724	973.486896	-1.2959	-0.00063208	-2.3871	-0.0011643	-3.683	-0.0017964	487.7492532600434	39.174	0.69576	39.728	39.401	40.097	0.55449					21	15	2	0	0	0	0.20789	1	3255	3255		29.15	9.1528	1	55705			59660	7997	39857	39873	67667	67667					-0.0009080548219344564
TVIDGVVLL	9	Unmodified	_TVIDGVVLL_					0	0	0		ENST00000421606.6_2_16:55801397-55827869:+|nuORF	ENST00000421606.6_2_16:55801397-55827869:+|nuORF	ENST00000421606.6_2_16:55801397-55827869:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.7901306152344	2	464.789318	927.564084	-1.1101	-0.00051598	3.984	0.0018517	2.8738	0.0013357	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.78983	2	2190	2151;2190		27.882	1.0861	1	415400			59661	11466	39858	39874	67668;67669	67669					0.09740412734140591
TVIDGVVLL	9	Unmodified	_TVIDGVVLL_					0	0	0		ENST00000421606.6_2_16:55801397-55827869:+|nuORF	ENST00000421606.6_2_16:55801397-55827869:+|nuORF	ENST00000421606.6_2_16:55801397-55827869:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.79083251953125	2	464.789318	927.564084	0.89139	0.00041431	1.9223	0.00089347	2.8137	0.0013078	464.79003742399567	33.921	1.5866	34.225	33.702	35.289	0.30494					91	38	3	0	0	0	0.74721	1	2555	2555		37.159	10.363	1	1052300			59662	11466	39858	39874	67670	67670					0.09740412734140591
TVIEGVVVL	9	Unmodified	_TVIEGVVVL_					0	0	0			REV__ENSG00000131711|ENST00000296755|MAP1B	REV__ENSG00000131711|ENST00000296755|MAP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.8028564453125	2	464.789318	927.564084	-0.014658	-6.8129E-06	3.0233	0.0014052	3.0086	0.0013984	464.7906118209948	36.96	1.5179	36.936	36.1	37.617	-0.023979					72	33	3	0	0	0	0.39977	1	2425	2425		57.811	4.4598	1	237030	+		59663	18960	39859	39875	67671	67671					0.09740412734140591
TVIEGVVVL	9	Unmodified	_TVIEGVVVL_					0	0	0			REV__ENSG00000131711|ENST00000296755|MAP1B	REV__ENSG00000131711|ENST00000296755|MAP1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7909851074219	2	464.789318	927.564084	0.19154	8.9025E-05	2.6971	0.0012536	2.8886	0.0013426	464.7904622046614	36.811	0.86831	36.91	36.514	37.382	0.099277					56	23	3	0	0	0	0.7932	1	2033	2033		24.203	0	1	232950	+		59664	18960	39859	39875	67672	67672					0.09740412734140591
TVIKLAILY	9	Unmodified	_TVIKLAILY_					0	0	0		nc|ENSG00000145779|O95379-3|TNFAIP8;nc|ENSG00000145779|O95379-2|TNFAIP8;ENSG00000145779|ENST00000504771|TNFAIP8;ENST00000415806.2_1_5:118727135-118729073:+|nuORF;nc|ENSG00000145779|O95379-4|TNFAIP8	nc|ENSG00000145779|O95379-3|TNFAIP8	nc|ENSG00000145779|O95379-3|TNFAIP8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.3439331054688	2	517.336436	1032.65832	0.46243	0.00023923	-1.4876	-0.00076958	-1.0252	-0.00053035	517.3354346372951	75.766	1.1209	76.161	75.742	76.863	0.39507					55	26	3	0	0	0	0.10807	1	8585	8585		90.777	29.805	1	564330			59665	4790	39860	39876	67673	67673					0.1432955155628406
TVIKLAILY	9	Unmodified	_TVIKLAILY_					0	0	0		nc|ENSG00000145779|O95379-3|TNFAIP8;nc|ENSG00000145779|O95379-2|TNFAIP8;ENSG00000145779|ENST00000504771|TNFAIP8;ENST00000415806.2_1_5:118727135-118729073:+|nuORF;nc|ENSG00000145779|O95379-4|TNFAIP8	nc|ENSG00000145779|O95379-3|TNFAIP8	nc|ENSG00000145779|O95379-3|TNFAIP8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	517.336436	1032.65832	-0.071702	-3.7094E-05	-0.89708	-0.00046409	-0.96878	-0.00050118	517.3358208528	75.61	1.2776	76.174	75.781	77.058	0.56458	0.0063865	0.00022295	NaN	90.777	62	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	596620			59666	4790	39860	39876							0.1432955155628406
TVILLPTLG	9	Unmodified	_TVILLPTLG_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2;REV__ENST00000566635.5_1_15:28356911-28362639:-|nuORF	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.79998779296875	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.7932	1	3680	3680		17.365	0	1	251610	+		59667	18791;28872	39861	39877	67674	67674					0.11905003113815837
TVIVGVVRR	9	Unmodified	_TVIVGVVRR_					0	0	0		nc|ENSG00000073417|O60658-4|PDE8A;nc|ENSG00000073417|O60658-3|PDE8A;nc|ENSG00000073417|O60658-5|PDE8A;nc|ENSG00000073417|O60658-6|PDE8A;nc|ENSG00000073417|O60658-2|PDE8A;ENSG00000073417|ENST00000394553|PDE8A	nc|ENSG00000073417|O60658-4|PDE8A	nc|ENSG00000073417|O60658-4|PDE8A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.329833984375	2	499.827101	997.639649	1.0233	0.00051145	-0.42263	-0.00021124	0.60063	0.00030021	499.8266355697786	19.569	0.38315	19.641	19.479	19.862	0.071129					31	13	3	0	0	0	0.76255	1	418	418		35.618	10.168	1	67609			59668	1292	39862	39878	67675	67675					0.1407343470508522
TVKAKTDL	8	Unmodified	_TVKAKTDL_					0	0	0		ENSG00000188191|ENST00000537384|PRKAR1B	ENSG00000188191|ENST00000537384|PRKAR1B	ENSG00000188191|ENST00000537384|PRKAR1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2615051269531	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.87064	1	3046	3046		29.15	2.3535	1	22924000			59669	7914	39863	39879	67676	67676					0.07010669040232642
TVKAKTDL	8	Unmodified	_TVKAKTDL_					0	0	0		ENSG00000188191|ENST00000537384|PRKAR1B	ENSG00000188191|ENST00000537384|PRKAR1B	ENSG00000188191|ENST00000537384|PRKAR1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2622985839844	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.80308	1	3023	3023		16.473	0	1	21381000			59670	7914	39863	39879	67677	67677					0.07010669040232642
TVKATSPLIE	10	Unmodified	_TVKATSPLIE_					0	0	0		ENSG00000145362|ENST00000357077|ANK2	ENSG00000145362|ENST00000357077|ANK2	ENSG00000145362|ENST00000357077|ANK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.6074829101562	2	529.808239	1057.60193	0.050414	2.671E-05	0.00035921	1.9031E-07	0.050773	2.69E-05	529.8075831257869	74.897	0.45671	75.461	75.208	75.665	0.56458					15	10	2	0	0	0	0.37624	1	8457	8457		56.434	10.482	1	93291			59671	4765	39864	39880	67678	67678					0.07542878928961727
TVKGVTLSQK	10	Unmodified	_TVKGVTLSQK_					0	0	0			REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.821044921875	2	530.821681	1059.62881	-0.85099	-0.00045172	-0.35727	-0.00018965	-1.2083	-0.00064137	530.8213432265311	82.745	2.1308	82.745	82.264	84.395	0					134	52	5	0	0	0	0.81117	1	7744	7744		38.754	8.4359	1	4119600	+		59672	17344	39865	39881	67679	67679					0.10137987540110771
TVKIKPWQ	8	Unmodified	_TVKIKPWQ_					0	0	0			REV__nc|ENSG00000100106|Q9H2D6-3|TRIOBP	REV__nc|ENSG00000100106|Q9H2D6-3|TRIOBP	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.3045654296875	2	500.302927	998.591301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.171	1	94.603	94.103	95.103	0.4324								0	0	0	0.29498	1	11235	11235		26.796	5.8492	1		+		59673	17139	39866	39882	67680	67680					0.09194941065163675
TVKKKQSLSN	10	Unmodified	_TVKKKQSLSN_					0	0	0			REV__ENST00000462622.5_1_7:154002507-154172193:+|nuORF	REV__ENST00000462622.5_1_7:154002507-154172193:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	566.83984375	2	566.837862	1131.66117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.66	1	100.66	100.16	101.16	0								0	0	0	0.45132	1	10214	10214		24.519	1.9395	1		+		59674	18857	39867	39883	67681	67681					0.10060774943144679
TVKVKGTA	8	Unmodified	_TVKVKGTA_					0	0	0		ENSG00000167914|ENST00000301659|GSDMA	ENSG00000167914|ENST00000301659|GSDMA	ENSG00000167914|ENST00000301659|GSDMA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.2528076171875	2	402.252903	802.491253	0.012695	5.1066E-06	-0.92253	-0.00037109	-0.90984	-0.00036598	402.25241799368695	20.158	0.44477	20.234	20.057	20.502	0.075848					34	22	2	0	0	0	0.80308	1	484	484		16.473	0	1	276350			59675	6341	39868	39884	67682	67682					0.0821070373136763
TVLAQKKIHK	10	Unmodified	_TVLAQKKIHK_					0	0	0			REV__ENSG00000106952|ENST00000223795|TNFSF8	REV__ENSG00000106952|ENST00000223795|TNFSF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.3712158203125	2	583.374415	1164.73428	-1.7422	-0.0010164	4.0544	0.0023653	2.3122	0.0013489	583.3766458505703	43.605	2.2277	44.055	43.187	45.415	0.45024					135	54	4	0	0	0	0.77314	3	3967	3956;3967;3979		40.778	7.9657	1	6139000	+		59676	17638	39869	39885	67683;67684;67685	67684					0.1584994845638903
TVLDGQKVAN	10	Unmodified	_TVLDGQKVAN_					0	0	0			REV__ENSG00000136381|ENST00000258886|IREB2	REV__ENSG00000136381|ENST00000258886|IREB2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7882690429688	2	522.787838	1043.56112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.551	1	46.022	45.522	46.522	0.47139								0	0	0	0.43314	1	4241	4241		67.494	2.0283	1		+		59677	19307	39870	39886	67686	67686					0.04108537609317864
TVLELVINY	9	Unmodified	_TVLELVINY_					0	0	0		nc|ENSG00000089127|P00973-4|OAS1;nc|ENSG00000089127|P00973-2|OAS1;ENSG00000089127|ENST00000202917|OAS1;nc|ENSG00000089127|P00973-3|OAS1	nc|ENSG00000089127|P00973-4|OAS1	nc|ENSG00000089127|P00973-4|OAS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	532.3043212890625	2	532.305332	1062.59611	1.5626	0.0008318	-1.7347	-0.00092341	-0.17209	-9.1602E-05	532.3041911038255	92.465	0.92314	92.911	92.561	93.484	0.44662					48	21	3	0	0	0	0.6204	1	10989	10989		45.972	3.5761	1	231150			59678	1610	39871	39887	67687	67687					0.06731780417271693
TVLELVINY	9	Unmodified	_TVLELVINY_					0	0	0		nc|ENSG00000089127|P00973-4|OAS1;nc|ENSG00000089127|P00973-2|OAS1;ENSG00000089127|ENST00000202917|OAS1;nc|ENSG00000089127|P00973-3|OAS1	nc|ENSG00000089127|P00973-4|OAS1	nc|ENSG00000089127|P00973-4|OAS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.3038940429688	2	532.305332	1062.59611	-0.67287	-0.00035817	0.68183	0.00036294	0.0089555	4.7671E-06	532.3054184280458	92.521	1.0469	92.984	92.658	93.705	0.46249					49	24	3	0	0	0	0.33718	1	11041	11041		62.107	21.535	1	200570			59679	1610	39871	39887	67688	67688					0.06731780417271693
TVLELVTQY	9	Unmodified	_TVLELVTQY_					0	0	0		ENSG00000111335|ENST00000392583|OAS2;nc|ENSG00000111335|P29728|OAS2;ENSG00000111331|ENST00000228928|OAS3	ENSG00000111335|ENST00000392583|OAS2	ENSG00000111335|ENST00000392583|OAS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.2937622070312	2	533.294965	1064.57538	-0.17445	-9.3032E-05	-0.07368	-3.9293E-05	-0.24813	-0.00013232	533.2947736550041	83.064	1.3319	83.495	83.129	84.461	0.43108					72	31	3	0	0	0	0.48102	1	9639	9639		52.937	12.364	1	873570			59680	2574	39872	39888	67689	67689					0.04567190037619184
TVLELVTQY	9	Unmodified	_TVLELVTQY_					0	0	0		ENSG00000111335|ENST00000392583|OAS2;nc|ENSG00000111335|P29728|OAS2;ENSG00000111331|ENST00000228928|OAS3	ENSG00000111335|ENST00000392583|OAS2	ENSG00000111335|ENST00000392583|OAS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.2938842773438	2	533.294965	1064.57538	-0.06616	-3.5283E-05	0.092742	4.9459E-05	0.026582	1.4176E-05	533.2946859826005	83.037	1.2459	83.511	83.172	84.418	0.47383					76	29	4	0	0	0	0.33718	2	9673	9660;9673		62.107	7.3427	1	1096900			59681	2574	39872	39888	67690;67691	67691					0.04567190037619184
TVLGKKET	8	Unmodified	_TVLGKKET_					0	0	0		nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532|DMD;ENSG00000198947|ENST00000357033|DMD;nc|ENSG00000198947|P11532-3|DMD;nc|ENSG00000198947|P11532-2|DMD	nc|ENSG00000198947|P11532-4|DMD	nc|ENSG00000198947|P11532-4|DMD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2620849609375	2	438.263468	874.512382	-1.0936	-0.00047928	1.1773	0.00051595	0.08368	3.6674E-05	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.88601	1	2925	2925		34.173	6.2903	1	2862500			59682	8378	39873	39889	67692	67692					0.07010669040232642
TVLGRWARHL	10	Unmodified	_TVLGRWARHL_					0	0	0		chr8:38428204-38428352|21|39.43|0.49|6.34|-|0|None,FGFR1|1	chr8:38428204-38428352|21|39.43|0.49|6.34|-|0|None,FGFR1|1	chr8:38428204-38428352|21|39.43|0.49|6.34|-|0|None,FGFR1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.57476806640625	3	403.57188	1207.69381	2.7142	0.0010954	4.4811	0.0018085	7.1953	0.0029038	403.5735867782374	82.542	1.5525	82.601	81.516	83.068	0.059158					87	35	3	0	0	0	0.83456	1	8236	8236		37.508	3.5865	1	371500			59683	517	39874	39890	67693	67693					0.09827026856623888
TVLILLLLPT	10	Unmodified	_TVLILLLLPT_					0	0	0		ENSG00000138028|ENST00000402394|CGREF1;ENST00000467539.1_1_2:27325392-27327225:-|nuORF;nc|ENSG00000138028|Q99674-2|CGREF1	ENSG00000138028|ENST00000402394|CGREF1	ENSG00000138028|ENST00000402394|CGREF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	548.37353515625	2	548.373018	1094.73148	-0.26655	-0.00014617	2.6931	0.0014768	2.4265	0.0013306	548.374310727377	37.412	2.4822	37.359	36.203	38.685	-0.053558					161	55	4	0	0	0	0.88945	1	2675	2675		10.866	0	1	654980			59684	4255	39875	39891	67694	67694					0.18790680278880245
TVLIMIVFV	9	Unmodified	_TVLIMIVFV_					0	0	0		ENSG00000181619|ENST00000395116|GPR135	ENSG00000181619|ENST00000395116|GPR135	ENSG00000181619|ENST00000395116|GPR135	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	517.8187255859375	2	517.819564	1033.62458	0.9943	0.00051487	-1.8394	-0.00095247	-0.84509	-0.0004376	517.81845543952	93.057	1.5114	93.102	92.582	94.093	0.045448					101	35	5	0	0	0	0.7932	1	9764	9764		25.45	3.7478	1	1083300			59685	7395	39876	39892	67695	67695					0.10910806792867334
TVLKIIFTN	9	Unmodified	_TVLKIIFTN_					0	0	0			REV__ENST00000427814.5_1_7:27871882-27872035:-|nuORF	REV__ENST00000427814.5_1_7:27871882-27872035:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8275756835938	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.7932	1	11113	11113		22.58	0.87732	1	30867000	+		59686	26572	39877	39893	67696	67696					0.11092077033868009
TVLLLPLGT	9	Unmodified	_TVLLLPLGT_					0	0	0		ENSG00000228727|ENST00000415669|SAPCD1;nc|ENSG00000228727|Q5SSQ6|SAPCD1	ENSG00000228727|ENST00000415669|SAPCD1	ENSG00000228727|ENST00000415669|SAPCD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.7997741699219	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3134	3134		16.473	0.83134	1	890090			59687	8724	39878	39894	67697	67697					0.11905003113804469
TVLRPRAS	8	Unmodified	_TVLRPRAS_					0	0	0		ENST00000424435.1_1_1:154376247-154376379:-|nuORF	ENST00000424435.1_1_1:154376247-154376379:-|nuORF	ENST00000424435.1_1_1:154376247-154376379:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.27392578125	2	450.274701	898.534849	-1.7762	-0.00079979	1.8456	0.00083102	0.069358	3.123E-05	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.8347	1	12112	12112		23.042	0	1	2494900			59688	11515	39879	39895	67698	67698					0.08152313228515595
TVLTQLKQLQ	10	Unmodified	_TVLTQLKQLQ_					0	0	0			REV__ENSG00000157613|ENST00000621158|CREB3L1	REV__ENSG00000157613|ENST00000621158|CREB3L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.35107421875	2	586.355888	1170.69722	-1.4552	-0.00085327	2.9291	0.0017175	1.4739	0.00086421	586.3577938983987	73.5	0.88083	73.888	73.615	74.496	0.38779					30	23	2	0	0	0	0.86587	1	8249	8249		29.17	0	1	727300	+		59689	20555	39880	39896	67699	67699					0.11870232119986213
TVLVLWRLVP	10	Unmodified	_TVLVLWRLVP_					0	0	0		ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	599.2761840820312	2	598.381709	1194.74886	-1.7641	-0.0010556	1.2492	0.00074748	-0.51497	-0.00030815	598.3824318861281	41.194	0.78385	41.828	41.496	42.28	0.6339					56	21	3	0	0	0	0.37624	1	3581	3581		20.947	4.4738	1	4475400			59690	10912	39881	39897	67700	67700					0.15928020604542326
TVMEGKPIEL	10	Unmodified	_TVMEGKPIEL_					0	0	0			REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.8016967773438	2	558.8021	1115.58965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.165	1	31.154	30.654	31.654	-0.010656								0	0	0	0.45132	1	1684	1684		35.152	2.3396	1		+		59691	18341	39882	39898	67701	67701					0.03647519194259985
TVMGIAFAAF	10	Unmodified	_TVMGIAFAAF_					0	0	0		ENST00000470600.1_1_1:92161226-92177919:-|nuORF;nc|ENSG00000069702|Q03167-2|TGFBR3;ENSG00000069702|ENST00000212355|TGFBR3;ENST00000532540.5_1_1:92149298-92327033:-|nuORF	ENST00000470600.1_1_1:92161226-92177919:-|nuORF	ENST00000470600.1_1_1:92161226-92177919:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.7633666992188	2	514.267696	1026.52084	0.1586	8.1563E-05	2.1732	0.0011176	2.3318	0.0011992	514.2687216686654	76.701	0.56897	77.27	77.006	77.575	0.56836					31	19	2	0	0	0	0.6398	1	8735	8735		47.916	1.9636	1	499140			59692	1224	39883	39899	67702	67702					0.008638996851914271
TVMRVRLPS	9	Unmodified	_TVMRVRLPS_					0	0	0			REV__ENST00000582655.5_1_17:27237161-27237842:-|nuORF	REV__ENST00000582655.5_1_17:27237161-27237842:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.790283203125	2	529.810593	1057.60663	-0.59893	-0.00031732	-3.0684	-0.0016257	-3.6674	-0.001943	529.8080204389095	43.039	0.33218	43.472	43.253	43.586	0.4334					10	7	2	0	0	0	0.20789	1	3847	3847		25.574	1.0549	1	119630	+		59693	29003	39884	39900	67703	67703					0.08013484590742337
TVNKTVNKG	9	Unmodified	_TVNKTVNKG_					0	0	0			REV__ENSG00000111700|ENST00000381545|SLCO1B3	REV__ENSG00000111700|ENST00000381545|SLCO1B3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.2796936035156	2	480.777274	959.539994	0.53066	0.00025513	-0.90635	-0.00043575	-0.37569	-0.00018063	480.77701460701655	26.245	0.47073	26.291	26.141	26.612	0.045507					15	11	2	0	0	0	0.20789	1	1118	1118		29.15	10.825	1	25421	+		59694	17889	39885	39901	67704	67704					0.058605723004689025
TVNNSTAVI	9	Unmodified	_TVNNSTAVI_					0	0	0		ENSG00000073598|ENST00000158009|FNDC8	ENSG00000073598|ENST00000158009|FNDC8	ENSG00000073598|ENST00000158009|FNDC8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.74822998046875	2	459.748182	917.481811	2.1924	0.001008	-2.0361	-0.00093607	0.15639	7.1901E-05	459.74715013592817	26.212	0.79779	25.872	25.616	26.414	-0.34035					28	17	2	0	0	0	0.48102	1	1437	1437		52.937	6.9847	1	170760			59695	1293	39886	39902	67705	67705					0.01976890655180341
TVNVLGKRN	9	Unmodified	_TVNVLGKRN_					0	0	0		ENST00000562919.1_1_4:113152035-113152410:-|nuORF	ENST00000562919.1_1_4:113152035-113152410:-|nuORF	ENST00000562919.1_1_4:113152035-113152410:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.7994384765625	2	500.79854	999.582528	-0.20548	-0.00010291	0.93558	0.00046854	0.7301	0.00036563	500.79776973299846	94.355	2.1278	94.402	93.492	95.62	0.046173					87	50	4	0	0	0	0.7932	1	9926	9926		25.574	2.5316	1	522090			59696	13857	39887	39903	67706	67706					0.08271967428709104
TVPAEISKRV	10	Unmodified	_TVPAEISKRV_					0	0	0			REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y	REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.3273315429688	2	550.327131	1098.63971	0.84562	0.00046537	-0.71285	-0.0003923	0.13278	7.307E-05	550.3267482489723	100.06	1.2234	100.21	99.636	100.86	0.15073					67	27	3	0	0	0	0.86471	1	10415	10415		30.318	1.1682	1	401350	+		59697	17099	39888	39904	67707	67707					0.09433389914420331
TVPEAGRHE	9	Unmodified	_TVPEAGRHE_					0	0	0		ENSG00000263002|ENST00000426739|ZNF234	ENSG00000263002|ENST00000426739|ZNF234	ENSG00000263002|ENST00000426739|ZNF234	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.2494812011719	2	498.24888	994.483208	-1.5014	-0.00074805	4.4415	0.002213	2.9402	0.0014649	498.2515159511958	84.873	2.6908	85.023	83.276	85.967	0.14951					140	61	3	0	0	0	0.78536	1	8197	8197		29.15	0.89528	1	117250			59698	8937	39889	39905	67708	67708					-0.014254752560418638
TVPEILNGKTY	11	Unmodified	_TVPEILNGKTY_					0	0	0		ENSG00000134115|ENST00000446702|CNTN6	ENSG00000134115|ENST00000446702|CNTN6	ENSG00000134115|ENST00000446702|CNTN6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	617.8364868164062	2	617.837528	1233.6605	-0.43979	-0.00027172	0.93161	0.00057559	0.49182	0.00030386	617.8377103162491	62.173	0.6953	62.561	62.274	62.969	0.38845					42	15	4	0	0	0	0.60687	1	6648	6648		43.651	10.838	1	393860			59699	3911	39890	39906	67709	67709					0.05301935503439381
TVPLDVLQI	9	Unmodified	_TVPLDVLQI_					0	0	0		ENSG00000006530|ENST00000649286|AGK	ENSG00000006530|ENST00000649286|AGK	ENSG00000006530|ENST00000649286|AGK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	499.306640625	2	499.30005	996.585547	-1.4449	-0.00072144	3.0219	0.0015088	1.5769	0.00078737	499.3000240730148	53.495	0.13135	53.495	53.424	53.556	0					6	4	2	0	0	0	0.7932	1	4444	4444		21.96	1.9631	1	42786			59700	702	39891	39907	67710	67710					0.08711797762850892
TVPLFLRF	8	Unmodified	_TVPLFLRF_					0	0	0			REV__ENST00000430598.5_1_15:20613931-20667676:-|nuORF	REV__ENST00000430598.5_1_15:20613931-20667676:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.7988586425781	2	496.80002	991.585488	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.389	1	36.83	36.33	37.33	0.44043								0	0	0	0.29631	1	2871	2871		25.45	0	1		+		59701	26607	39892	39908	67711	67711					0.0893584255351243
TVPLLLTLG	9	Unmodified	_TVPLLLTLG_					0	0	0			REV__ENST00000541207.1_1_12:12674099-12674270:-|nuORF	REV__ENST00000541207.1_1_12:12674099-12674270:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8006286621094	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.7932	1	3383	3383		25.45	0	1	210360	+		59702	28478	39893	39909	67712	67712					0.11905003113815837
TVPLLLTLG	9	Unmodified	_TVPLLLTLG_					0	0	0			REV__ENST00000541207.1_1_12:12674099-12674270:-|nuORF	REV__ENST00000541207.1_1_12:12674099-12674270:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.80010986328125	2	463.799686	925.584819	-0.22039	-0.00010222	2.8768	0.0013343	2.6564	0.0012321	463.80077563915114	45.485	0.74849	45.417	45.021	45.77	-0.068634					44	18	3	0	0	0	0.7932	1	3287	3287		18.324	0	1	207040	+		59703	28478	39893	39909	67713	67713					0.11905003113815837
TVPLNVKL	8	Unmodified	_TVPLNVKL_					0	0	0			REV__ENST00000393892.7_1_17:40125938-40126070:+|nuORF	REV__ENST00000393892.7_1_17:40125938-40126070:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2847595214844	2	442.284203	882.553853	-0.28047	-0.00012405	0.52017	0.00023006	0.23971	0.00010602	442.2843559341612	47.977	1.5239	48.901	48.466	49.989	0.92315					80	37	4	0	0	0	0.9295	1	4587	4587		55.504	0	1	2499800	+		59704	26067	39894	39910	67714	67714					0.10787849799555715
TVPQKTLHL	9	Unmodified	_TVPQKTLHL_					0	0	0			REV__ENST00000373202.7_1_10:72629571-72629607:+|nuORF	REV__ENST00000373202.7_1_10:72629571-72629607:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8102416992188	2	518.811116	1035.60768	1.4869	0.00077141	-3.1709	-0.0016451	-1.684	-0.00087369	518.8094559796755	98.41	1.4425	98.787	98.408	99.851	0.37679					96	35	4	0	0	0	0.41566	1	11992	11992		56.721	7.2795	1	12414000	+		59705	25750	39895	39911	67715	67715					0.09130022231283874
TVPQMVVNILT	11	Unmodified	_TVPQMVVNILT_					0	0	0		ENSG00000221888|ENST00000641256|OR1C1	ENSG00000221888|ENST00000641256|OR1C1	ENSG00000221888|ENST00000641256|OR1C1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5644836425781	3	405.565291	1213.67404	-1.5366	-0.00062318	0.43469	0.0001763	-1.1019	-0.00044688	405.5653214341252	63.67	1.6841	63.67	63.02	64.704	0					168	78	3	0	0	0	0.75121	1	5557	5557		21.78	1.4654	1	187890			59706	8679	39896	39912	67716	67716					0.0757547001101102
TVPQVVQSH	9	Unmodified	_TVPQVVQSH_					0	0	0			REV__nc|ENSG00000143437|P27540-2|ARNT	REV__nc|ENSG00000143437|P27540-2|ARNT	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.7677917480469	2	497.769448	993.524344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.882	1	73.925	73.425	74.425	0.043648								0	0	0	0.29197	1	7128	7128		33.922	0.40605	1		+		59707	19810	39897	39913	67717	67717					0.027322857834292336
TVPSARRPV	9	Unmodified	_TVPSARRPV_					0	0	0		ENSG00000149016|ENST00000476907|TUT1	ENSG00000149016|ENST00000476907|TUT1	ENSG00000149016|ENST00000476907|TUT1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7945556640625	2	491.793258	981.571963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.051	1	73.181	72.681	73.681	0.13064								0	0	0	0.30778	1	6726	6726		27.882	1.0861	1				59708	4991	39898	39914	67718	67718					0.08043984774269575
TVPSPEPI	8	Unmodified	_TVPSPEPI_					0	0	0			REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2265319824219	2	420.229094	838.443634	-0.26172	-0.00010998	-2.7119	-0.0011396	-2.9737	-0.0012496	420.2278427718772	76.28	2.2676	76.231	74.595	76.863	-0.048271					136	69	3	0	0	0	0.86288	1	7535	7535		26.796	0	1	253020	+		59709	19515	39899	39915	67719	67719					0.017950047405179248
TVPTLVALL	9	Unmodified	_TVPTLVALL_					0	0	0			REV__ENSG00000144589|ENST00000456909|STK11IP	REV__ENSG00000144589|ENST00000456909|STK11IP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.80010986328125	2	463.799686	925.584819	0.28206	0.00013082	1.3238	0.000614	1.6059	0.00074482	463.8001612881591	41.523	1.5134	41.492	41.236	42.75	-0.030991					87	37	3	0	0	0	0.7932	1	3019	3019		19.36	0	1	527400	+		59710	19901	39900	39916	67720	67720					0.11905003113804469
TVPTRRRP	8	Unmodified	_TVPTRRRP_					0	0	0			REV__ENST00000531802.1_1_11:59577301-59578245:-|nuORF	REV__ENST00000531802.1_1_11:59577301-59578245:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79833984375	2	491.798875	981.583196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.672	1	56.705	56.205	57.205	0.033184								0	0	0	0.2939	1	5123	5123		27.882	2.3082	1		+		59711	28311	39901	39917	67721	67721					0.09166806868415733
TVPTVPEP	8	Unmodified	_TVPTVPEP_					0	0	0		ENST00000524522.5_1_11:118402605-118405292:+|nuORF	ENST00000524522.5_1_11:118402605-118405292:+|nuORF	ENST00000524522.5_1_11:118402605-118405292:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.7749328613281	2	420.229094	838.443634	0.19764	8.3054E-05	0.73365	0.0003083	0.93129	0.00039135	420.22954417839406	42.986	0.43452	42.957	42.793	43.228	-0.029461					12	9	2	0	0	0	0.4196	1	3277	3277		33.516	13.034	1	29888			59712	13217	39902	39918	67722	67722					0.017950047405292935
TVPVSLPSGG	10	Unmodified	_TVPVSLPSGG_					0	0	0		nc|ENSG00000124789|P49790-3|NUP153;ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153	nc|ENSG00000124789|P49790-3|NUP153	nc|ENSG00000124789|P49790-3|NUP153	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26397705078125	2	457.2531	912.491647	0.54453	0.00024899	-3.5178	-0.0016085	-2.9733	-0.0013595	457.25156742633317	82.891	0.21303	82.825	82.632	82.845	-0.066185					7	4	2	0	0	0	0.37624	1	8402	8402		26.693	0	1	34447			59713	3362	39903	39919	67723	67723					0.031900786605774556
TVQDTLKTL	9	Unmodified	_TVQDTLKTL_					0	0	0		ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.7928771972656	2	509.792589	1017.57063	-0.84186	-0.00042918	0.098611	5.0271E-05	-0.74325	-0.0003789	509.7926689474763	55.638	0.91766	55.669	55.291	56.209	0.030838					81	24	5	0	0	0	0.045756	1	4972	4972		109.48	5.4647	1	6603600			59714	6032	39904	39920	67724	67724					0.06254305894856316
TVQKYFQKGT	10	Unmodified	_TVQKYFQKGT_					0	0	0			REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.3231811523438	2	600.324588	1198.63462	-0.18991	-0.00011401	-0.93114	-0.00055898	-1.121	-0.00067299	600.3238493032328	110.54	1.5294	110.54	110.28	111.81	0					121	48	3	0	0	0	0.86471	1	11501	11501		30.318	3.2704	1	894450	+		59715	28940	39905	39921	67725	67725					0.043250860517900946
TVQLLVTVLDV	11	Unmodified	_TVQLLVTVLDV_					0	0	0		ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8;nc|ENSG00000081842|Q9UN73-2|PCDHA6;nc|ENSG00000081842|Q9UN73-3|PCDHA6;ENSG00000081842|ENST00000529310|PCDHA6	ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000081842|Q9UN73-3|PCDHA6	ENSG00000204962|ENST00000531613|PCDHA8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5809020996094	3	400.579706	1198.71729	3.1796	0.0012737	-0.89864	-0.00035998	2.2809	0.00091369	400.57916816268914	115.86	0.63822	115.89	115.41	116.05	0.026466					29	20	2	0	0	0	0.74022	1	12724	12724		24.232	3.3947	1	56920			59716	8503;1471	39906	39922	67726	67726					0.1258798305991604
TVQQGFPPQ	9	Unmodified	_TVQQGFPPQ_					0	0	0			REV__ENST00000457754.6_1_2:218933725-218933917:+|nuORF	REV__ENST00000457754.6_1_2:218933725-218933917:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	500.86181640625	2	501.256174	1000.49779	-1.1292	-0.00056602	2.4311	0.0012186	1.3019	0.00065257	501.25733123430626	74.453	1.2528	74.453	74.007	75.26	0					113	50	3	0	0	0	0.20789	1	6798	6798		40.778	25.913	1	578760	+		59717	26974	39907	39923	67727	67727					-0.0024340310790194053
TVRAPLKMM	9	Unmodified	_TVRAPLKMM_					0	0	0			REV__ENST00000175506.8_1_7:97501747-97501804:-|nuORF	REV__ENST00000175506.8_1_7:97501747-97501804:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7939453125	2	523.796097	1045.57764	0.20589	0.00010784	-4.3137	-0.0022595	-4.1078	-0.0021517	523.7937468382506	19.848	1.1814	19.218	18.937	20.118	-0.6296					65	25	3	0	0	0	0.76255	1	665	665		35.618	6.4687	1	863270	+		59718	24083	39908	39924	67728	67728					0.056676239700664155
TVRAVHRLLE	10	Unmodified	_TVRAVHRLLE_					0	0	0		nc|ENSG00000100350|Q8IWF2-2|FOXRED2;ENSG00000100350|ENST00000397224|FOXRED2	nc|ENSG00000100350|Q8IWF2-2|FOXRED2	nc|ENSG00000100350|Q8IWF2-2|FOXRED2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3589477539062	2	597.359296	1192.70404	1.8574	0.0011095	-4.3225	-0.0025821	-2.4651	-0.0014726	597.3562688740209	100.02	4.4704	100.37	97.029	101.5	0.34591					218	110	4	0	0	0	0.8505	1	12109	12109		19.104	0.84144	1	5142000			59719	1832	39909	39925	67729	67729					0.11539589791209437
TVRIQKSFR	9	Unmodified	_TVRIQKSFR_					0	0	0		ENST00000467062.5_1_9:15423926-15423977:+|nuORF	ENST00000467062.5_1_9:15423926-15423977:+|nuORF	ENST00000467062.5_1_9:15423926-15423977:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.8402709960938	2	567.840739	1133.66693	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.581	1	23.641	23.141	24.141	0.060431								0	0	0	0.30778	1	793	793		27.882	3.6795	1				59720	12143	39910	39926	67730	67730					0.10543918245457462
TVRLLLANLVI	11	Unmodified	_TVRLLLANLVI_					0	0	0		ENSG00000184574|ENST00000329858|LPAR5	ENSG00000184574|ENST00000329858|LPAR5	ENSG00000184574|ENST00000329858|LPAR5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.8792724609375	2	612.905548	1223.79654	-0.38813	-0.00023789	-3.6081	-0.0022114	-3.9962	-0.0024493	612.9031523886704	105.02	0.16618	105.01	104.94	105.11	-0.014809					6	3	2	0	0	0	0.1728	1	11349	11349		18.262	0	1	78013			59721	7624	39911	39927	67731	67731					0.1935967480474119
TVRPLAKLWRL	11	Unmodified	_TVRPLAKLWRL_					0	0	0			REV__ENSG00000115758|ENST00000234111|ODC1	REV__ENSG00000115758|ENST00000234111|ODC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.96124267578125	3	451.622351	1351.84522	0.25395	0.00011469	4.3567	0.0019676	4.6106	0.0020823	451.62419829630386	45.115	0.78364	45.164	44.861	45.645	0.048996					33	18	2	0	0	0	0.77511	1	3229	3229		16.53	1.8362	1	93515	+		59722	18148	39912	39928	67732	67732					0.18337588164490626
TVSDAILRY	9	Unmodified	_TVSDAILRY_					0	0	0		nc|ENSG00000002919|Q9Y5W9-2|SNX11;ENSG00000002919|ENST00000359238|SNX11	nc|ENSG00000002919|Q9Y5W9-2|SNX11	nc|ENSG00000002919|Q9Y5W9-2|SNX11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.28076171875	2	519.284931	1036.55531	0.68045	0.00035335	-0.77424	-0.00040205	-0.093789	-4.8703E-05	519.2844046691331	55.515	0.89942	55.916	55.53	56.429	0.40101					42	21	3	0	0	0	0.21969	3	5689	5689;5699;5714		71.877	13.096	1	939750			59723	654	39913	39929	67733;67734;67735	67733					0.03849439097643881
TVSDAILRY	9	Unmodified	_TVSDAILRY_					0	0	0		nc|ENSG00000002919|Q9Y5W9-2|SNX11;ENSG00000002919|ENST00000359238|SNX11	nc|ENSG00000002919|Q9Y5W9-2|SNX11	nc|ENSG00000002919|Q9Y5W9-2|SNX11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.281005859375	2	519.284931	1036.55531	0.22552	0.00011711	-0.32212	-0.00016727	-0.096599	-5.0163E-05	519.2846932163961	55.342	0.87309	55.91	55.531	56.404	0.56836					49	20	5	0	0	0	0.12688	2	5680	5680;5690		87.696	10.922	1	935340			59724	654	39913	39929	67736;67737	67736					0.03849439097643881
TVSEPAVIKR	10	Unmodified	_TVSEPAVIKR_					0	0	0		ENST00000527005.5_1_6:135286419-135303731:-|nuORF;nc|ENSG00000112339|Q9Y450-4|HBS1L;ENSG00000112339|ENST00000367837|HBS1L	ENST00000527005.5_1_6:135286419-135303731:-|nuORF	ENST00000527005.5_1_6:135286419-135303731:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.3270263671875	2	550.327131	1098.63971	1.2755	0.00070194	-1.1938	-0.00065698	0.081698	4.4961E-05	550.3264981095151	100.02	1.2719	100.07	99.504	100.78	0.047523					72	28	3	0	0	0	0.8651	1	10771	10771		25.574	5.5773	1	456100			59725	2659	39914	39930	67738	67738					0.09433389914420331
TVSFVSPGGY	10	Unmodified	_TVSFVSPGGY_					0	0	0			REV__ENST00000555070.1_1_14:89878823-90420935:-|nuORF	REV__ENST00000555070.1_1_14:89878823-90420935:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.7818908691406	2	507.250557	1012.48656	0.64612	0.00032774	-0.87786	-0.0004453	-0.23174	-0.00011755	507.24988071481937	48.256	1.3251	49.173	48.575	49.9	0.91708					82	32	3	0	0	0	0.37624	1	4737	4737		44.117	0	1	586890	+		59726	28676	39915	39931	67739	67739					-0.019182252020414126
TVSGHGRSP	9	Unmodified	_TVSGHGRSP_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	449.2332763671875	2	449.230491	896.446428	-1.2481	-0.0005607	1.5085	0.00067767	0.26038	0.00011697	449.23112787491493	83.63	3.2349	83.63	82.037	85.271	0					120	78	2	0	0	0	0.69624	1	7785	7785		40.778	0	1	126580			59727	3299	39916	39932	67740	67740					-0.0059372708195724044
TVSILPVVV	9	Unmodified	_TVSILPVVV_					0	0	0		ENST00000550963.1_1_12:72004384-72005014:-|nuORF;ENST00000552994.5_1_12:72004210-72005014:-|nuORF	ENST00000550963.1_1_12:72004384-72005014:-|nuORF	ENST00000550963.1_1_12:72004384-72005014:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.80078125	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3219	3219		19.36	1.0356	1	942760			59728	13664	39917	39933	67741	67741					0.11905003113804469
TVSKDRTTLL	10	Unmodified	_TVSKDRTTLL_					0	0	0			REV__nc|ENSG00000120868|O14727-5|APAF1	REV__nc|ENSG00000120868|O14727-5|APAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3285522460938	2	567.32987	1132.64519	1.497	0.00084932	-1.6772	-0.00095153	-0.18017	-0.00010222	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.85834	1	10184	10184		22.58	0	1	15259000	+		59729	18434	39918	39934	67742	67742					0.08417068706239661
TVSKPKKSNTL	11	Unmodified	_TVSKPKKSNTL_					0	0	0			REV__ENSG00000168329|ENST00000399220|CX3CR1	REV__ENSG00000168329|ENST00000399220|CX3CR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	601.8582763671875	2	601.858795	1201.70304	-1.2832	-0.00077232	-0.42174	-0.00025383	-1.705	-0.0010262	601.8583669122717	103.38	2.0705	103.5	103.11	105.18	0.11494					139	51	4	0	0	0	0.72106	1	10879	10879		28.081	1.0342	1	2503700	+		59730	21479	39919	39935	67743	67743					0.11025330631650831
TVSPLSVLL	9	Unmodified	_TVSPLSVLL_					0	0	0			REV__ENST00000491065.1_1_20:2641261-2641528:-|nuORF	REV__ENST00000491065.1_1_20:2641261-2641528:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.7894287109375	2	464.789318	927.564084	0.090365	4.2E-05	2.7326	0.0012701	2.823	0.0013121	464.7905453409174	36.857	1.3586	36.797	35.976	37.335	-0.060333					62	38	2	0	0	0	0.7932	1	2049	2049		21.96	0.25755	1	232790	+		59731	27648	39920	39936	67744	67744					0.09740412734140591
TVSPTIGLYM	10	Unmodified	_TVSPTIGLYM_					0	0	0			REV__nc|ENSG00000173626|Q5T215-2|TRAPPC3L	REV__nc|ENSG00000173626|Q5T215-2|TRAPPC3L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.7859497070312	2	541.283543	1080.55253	0.90507	0.0004899	2.5739	0.0013932	3.479	0.0018831	541.2848148372841	20.292	0.81443	20.271	20.029	20.843	-0.020922					88	41	3	0	0	0	0.86305	1	496	496		31.955	0.42505	1	521470	+		59732	21939	39921	39937	67745	67745					0.015478476484986459
TVTFSVSTK	9	Unmodified	_TVTFSVSTK_					0	0	0			REV__nc|ENSG00000203965|A8K855-2|EFCAB7	REV__nc|ENSG00000203965|A8K855-2|EFCAB7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2622985839844	2	485.266207	968.517862	-0.8809	-0.00042747	-1.7168	-0.00083312	-2.5977	-0.0012606	485.26525209052494	43.295	1.2543	43.728	43.419	44.674	0.4334					80	30	5	0	0	0	0.33718	1	3907	3907		62.107	1.1355	1	9714800	+		59733	23449	39922	39938	67746	67746					0.03234347832062667
TVTGGPSVSF	10	Unmodified	_TVTGGPSVSF_					0	0	0			REV__nc|ENSG00000211638|A0A075B6I0|IGLV8-61	REV__nc|ENSG00000211638|A0A075B6I0|IGLV8-61	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.2454528808594	2	476.242732	950.470912	-0.65425	-0.00031158	0.96931	0.00046162	0.31506	0.00015004	476.2431785276278	35.429	0.79068	35.373	35.089	35.879	-0.055901					37	17	3	0	0	0	0.77314	1	2318	2318		40.778	4.3314	1	188550	+		59734	30179	39923	39939	67747	67747					-0.006305117190890996
TVTIIEPE	8	Unmodified	_TVTIIEPE_					0	0	0			REV__nc|ENSG00000130396|P55196-2|AFDN	REV__nc|ENSG00000130396|P55196-2|AFDN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.2479553222656	2	451.247483	900.480414	-1.0589	-0.00047784	3.7993	0.0017144	2.7403	0.0012366	451.2490578408484	67.679	1.2813	67.739	67.313	68.595	0.059288					106	47	3	0	0	0	0.89043	1	6079	6079		35.618	3.6634	1	166740	+		59735	29839	39924	39940	67748	67748					0.026192565664246104
TVTIIIFY	8	Unmodified	_TVTIIIFY_					0	0	0		nc|ENSG00000180745|Q8NCR9-2|CLRN3;ENSG00000180745|ENST00000368671|CLRN3	nc|ENSG00000180745|Q8NCR9-2|CLRN3	nc|ENSG00000180745|Q8NCR9-2|CLRN3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.28790283203125	2	485.286411	968.55827	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.63	1	44.08	43.58	44.58	0.45025								0	0	0	0.30609	1	3957	3957		44.531	0.41427	1				59736	7342	39925	39941	67749	67749					0.07273314222470617
TVTIIIFY	8	Unmodified	_TVTIIIFY_					0	0	0		nc|ENSG00000180745|Q8NCR9-2|CLRN3;ENSG00000180745|ENST00000368671|CLRN3	nc|ENSG00000180745|Q8NCR9-2|CLRN3	nc|ENSG00000180745|Q8NCR9-2|CLRN3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.28179931640625	2	485.286411	968.55827	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.754	1	44.205	43.705	44.705	0.45025								0	0	0	0.30609	1	3976	3976		44.531	0.41427	1				59737	7342	39925	39941	67750	67750					0.07273314222470617
TVTIVSGLL	9	Unmodified	_TVTIVSGLL_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.77972412109375	2	451.781493	901.548434	-0.13936	-6.2962E-05	-3.2525	-0.0014694	-3.3919	-0.0015324	451.78016542853146	86.777	1.2456	86.844	86.37	87.616	0.067444					84	28	4	0	0	0	0.76764	1	8743	8743		34.173	2.2177	1	241100			59738	3435	39926	39942	67751	67751					0.09372126217101595
TVTIVSGLL	9	Unmodified	_TVTIVSGLL_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	451.781493	901.548434	-0.63578	-0.00028724	-2.2374	-0.0010108	-2.8731	-0.001298	451.7803947001528	86.473	1.0648	86.916	86.531	87.596	0.44331	0.12658	0.00030371	NaN	34.173	35	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119940			59739	3435	39926	39942							0.09372126217101595
TVTIVSGLL	9	Unmodified	_TVTIVSGLL_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	451.781493	901.548434	-0.63794	-0.00028821	-2.3538	-0.0010634	-2.9918	-0.0013516	451.7803689490057	86.548	1.2279	87.002	86.575	87.803	0.4543	0.21257	0.00019849	NaN	34.173	42	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	157620			59740	3435	39926	39942							0.09372126217101595
TVTKAQSLKSA	11	Unmodified	_TVTKAQSLKSA_					0	0	0		nc|ENSG00000182366|P0C7U9|FAM87A	nc|ENSG00000182366|P0C7U9|FAM87A	nc|ENSG00000182366|P0C7U9|FAM87A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.330322265625	2	567.32987	1132.64519	-1.3957	-0.00079181	1.2535	0.00071113	-0.14221	-8.0679E-05	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.7434	1	9178	9178		23.523	4.1627	1	17338000			59741	15139	39927	39943	67752	67752					0.08417068706239661
TVTKERLSK	9	Unmodified	_TVTKERLSK_					0	0	0			REV__nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	REV__nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.3189086914062	2	531.319306	1060.62406	1.2436	0.00066073	-1.246	-0.000662	-0.0023897	-1.2697E-06	531.3184005268905	94.973	2.3333	95.019	94.535	96.868	0.046173					183	54	5	0	0	0	0.7932	1	10105	10105		24.519	2.8334	1	4128600	+		59742	29955	39928	39944	67753	67753					0.0961710339736328
TVTKMKAFRL	10	Unmodified	_TVTKMKAFRL_					0	0	0			REV__ENSG00000162009|ENST00000689027|SSTR5	REV__ENSG00000162009|ENST00000689027|SSTR5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8561401367188	2	597.855001	1193.69545	-1.2963	-0.00077498	3.3616	0.0020097	2.0653	0.0012348	597.8567837809966	92.209	2.8641	92.394	90.521	93.385	0.18582					216	68	5	0	0	0	0.82886	1	9316	9316		37.812	1.3648	1	2401200	+		59743	20791	39929	39945	67754	67754					0.10634899830392897
TVTKWKFFQV	10	Unmodified	_TVTKWKFFQV_					0	0	0			REV__nc|ENSG00000164418|Q13002-3|GRIK2	REV__nc|ENSG00000164418|Q13002-3|GRIK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	642.3646850585938	2	642.360973	1282.70739	0.024157	1.5517E-05	2.9366	0.0018863	2.9607	0.0019019	642.3631004001724	110.04	0.91905	110.04	109.8	110.72	0					76	31	3	0	0	0	0.77314	1	11438	11438		40.778	4.3314	1	235710	+		59744	21081	39930	39946	67755	67755					0.07734839845215902
TVTLGKPAAM	10	Unmodified	_TVTLGKPAAM_					0	0	0		ENST00000360311.4_1_3:32023354-32030180:+|nuORF	ENST00000360311.4_1_3:32023354-32030180:+|nuORF	ENST00000360311.4_1_3:32023354-32030180:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.78106689453125	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.595	1	85.744	85.244	86.244	0.14857								0	0	0	0.45132	1	8382	8382		31.53	3.4483	1				59745	10444	39931	39947	67756	67756					0.04803284713909761
TVTLPVFMPAP	11	Unmodified	_TVTLPVFMPAP_					0	0	0			REV__ENST00000566889.5_1_16:89865197-89865416:-|nuORF	REV__ENST00000566889.5_1_16:89865197-89865416:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	586.8236694335938	2	586.822835	1171.63112	3.286	0.0019283	-1.825	-0.001071	1.4609	0.00085731	586.8216293671125	110.39	1.5907	110.37	110.09	111.68	-0.027641					140	51	5	0	0	0	0.6921	1	12212	12212		32.812	1.2826	1	6942100	+		59746	28875	39932	39948	67757	67757					0.052166999535756986
TVTPIMITS	9	Unmodified	_TVTPIMITS_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.7672119140625	2	481.764986	961.515419	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.19	1	52.25	51.75	52.75	0.059719								0	0	0	0.28772	1	4196	4196		35.618	3.6634	1				59747	5333;15007	39933	39949	67758	67758					0.033121761027246066
TVTSLTKV	8	Unmodified	_TVTSLTKV_					0	0	0			REV__ENST00000380752.9_1_13:30085169-30085490:-|nuORF	REV__ENST00000380752.9_1_13:30085169-30085490:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	424.7556457519531	2	424.758018	847.501483	-1.9552	-0.00083051	-4.1237	-0.0017516	-6.079	-0.0025821	424.7561668542161	35.039	1.9661	35.039	34.293	36.259	0					97	51	3	0	0	0	0.84341	1	1867	1867		24.203	6.8378	1	191440	+		59748	25952	39934	39950	67759	67759					0.07163266665941137
TVTSLTKV	8	Unmodified	_TVTSLTKV_					0	0	0			REV__ENST00000380752.9_1_13:30085169-30085490:-|nuORF	REV__ENST00000380752.9_1_13:30085169-30085490:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	424.758018	847.501483	-1.9552	-0.00083051	-4.1237	-0.0017516	-6.079	-0.0025821	424.7561668542161	35.039	1.9661	35.039	34.293	36.259	0	-0.00077077	0.00064922	NaN	24.203	97	51	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191440	+		59749	25952	39934	39950							0.07163266665941137
TVTSLTKV	8	Unmodified	_TVTSLTKV_					0	0	0			REV__ENST00000380752.9_1_13:30085169-30085490:-|nuORF	REV__ENST00000380752.9_1_13:30085169-30085490:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	424.758018	847.501483	-0.16058	-6.8206E-05	-5.958	-0.0025307	-6.1186	-0.0025989	424.7552500756756	35.033	0.71023	35.021	34.807	35.517	-0.012199	-0.018417	-0.00090902	NaN	24.203	32	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77928	+		59750	25952	39934	39950							0.07163266665941137
TVTSLTKV	8	Unmodified	_TVTSLTKV_					0	0	0			REV__ENST00000380752.9_1_13:30085169-30085490:-|nuORF	REV__ENST00000380752.9_1_13:30085169-30085490:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	424.758018	847.501483	-0.70571	-0.00029976	-5.5349	-0.002351	-6.2406	-0.0026507	424.7556079579859	35.234	0.65772	35.177	34.768	35.426	-0.056385	0.13796	-0.00054954	NaN	24.203	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81342	+		59751	25952	39934	39950							0.07163266665941137
TVTSLTKV	8	Unmodified	_TVTSLTKV_					0	0	0			REV__ENST00000380752.9_1_13:30085169-30085490:-|nuORF	REV__ENST00000380752.9_1_13:30085169-30085490:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	424.758018	847.501483	1.1905	0.00050568	-7.4177	-0.0031507	-6.2272	-0.0026451	424.7547722170455	34.914	0.79235	34.921	34.727	35.519	0.0063934	-0.11877	-0.0021491	NaN	24.203	35	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98506	+		59752	25952	39934	39950							0.07163266665941137
TVTTTLKN	8	Unmodified	_TVTTTLKN_					0	0	0		nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;ENSG00000126214|ENST00000334553|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	439.2518005371094	2	439.2531	876.491647	-0.15804	-6.9419E-05	-0.5201	-0.00022845	-0.67814	-0.00029787	439.25283253687115	90.959	2.4133	91.028	90.47	92.884	0.069328					111	57	3	0	0	0	0.8347	1	9391	9391		23.042	1.0826	1	1503300			59753	3443	39935	39951	67760	67760					0.04846078660580133
TVTTTLKN	8	Unmodified	_TVTTTLKN_					0	0	0		nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;ENSG00000126214|ENST00000334553|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.25189208984375	2	439.2531	876.491647	1.4468	0.0006355	-2.327	-0.0010222	-0.88026	-0.00038666	439.25208082203966	90.936	2.3215	90.869	90.307	92.629	-0.067093					98	55	4	0	0	0	0.85277	1	9530	9530		25.45	6.0902	1	1599000			59754	3443	39935	39951	67761	67761					0.04846078660580133
TVTTTLKN	8	Unmodified	_TVTTTLKN_					0	0	0		nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;ENSG00000126214|ENST00000334553|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.25225830078125	2	439.2531	876.491647	2.0012	0.00087905	-2.9011	-0.0012743	-0.89983	-0.00039525	439.25182012841026	90.753	2.1923	90.8	90.262	92.454	0.046448					92	52	4	0	0	0	0.84341	1	9405	9405		24.203	4.8428	1	1626100			59755	3443	39935	39951	67762	67762					0.04846078660580133
TVTTTLKN	8	Unmodified	_TVTTTLKN_					0	0	0		nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;ENSG00000126214|ENST00000334553|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.24578857421875	2	439.2531	876.491647	1.5601	0.00068527	2.3948	0.0010519	3.9549	0.0017372	439.2538565037537	106.03	0.66983	106.16	105.79	106.46	0.12742					46	24	3	0	0	0	0.87479	1	12929	12929		30.504	2.6214	1	187220			59756	3443	39935	39951	67763	67763					0.04846078660580133
TVTTTLKN	8	Unmodified	_TVTTTLKN_					0	0	0		nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;ENSG00000126214|ENST00000334553|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	439.2531	876.491647	-1.4631	-0.00064267	0.74881	0.00032892	-0.71428	-0.00031375	439.25344442636646	90.622	2.3533	90.84	90.343	92.696	0.21736	-0.11631	0.0014062	NaN	24.203	107	56	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1160300			59757	3443	39935	39951							0.04846078660580133
TVTTTLKN	8	Unmodified	_TVTTTLKN_					0	0	0		nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;ENSG00000126214|ENST00000334553|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	439.2531	876.491647	0.65109	0.00028599	-1.4658	-0.00064384	-0.81467	-0.00035785	439.25250053248254	90.728	2.3589	90.882	90.345	92.704	0.15388	-0.07389	-0.00053927	NaN	24.203	94	56	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1115000			59758	3443	39935	39951							0.04846078660580133
TVTTTLKN	8	Unmodified	_TVTTTLKN_					0	0	0		nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;ENSG00000126214|ENST00000334553|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	nc|ENSG00000126214|Q07866-8|KLC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	439.2531	876.491647	-1.8097	-0.00079491	0.83729	0.00036778	-0.9724	-0.00042713	439.253605370978	90.689	2.3329	90.869	90.347	92.679	0.18029	-0.08672	0.001484	NaN	24.203	74	55	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	966570			59759	3443	39935	39951							0.04846078660580133
TVTVTAVRKG	10	Unmodified	_TVTVTAVRKG_					0	0	0			REV__ENST00000393640.8_1_16:70432432-70432528:-|nuORF	REV__ENST00000393640.8_1_16:70432432-70432528:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3134765625	2	516.314023	1030.61349	0.86672	0.0004475	-0.84742	-0.00043753	0.019307	9.9683E-06	516.3135062114914	117.18	1.2447	117.2	117.04	118.29	0.026459					74	44	2	0	0	0	0.86763	1	12861	12861		26.693	5.746	1	57168	+		59760	26060	39936	39952	67764	67764					0.09941120742928433
TVTYRAPT	8	Unmodified	_TVTYRAPT_					0	0	0			REV__ENSG00000177150|ENST00000651643|FAM210A	REV__ENSG00000177150|ENST00000651643|FAM210A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.7448425292969	2	454.745442	907.476331	1.0531	0.00047889	-2.1634	-0.00098381	-1.1103	-0.00050492	454.74431898752607	103.74	1.4301	103.79	103.32	104.75	0.041489					80	34	3	0	0	0	0.87479	1	11300	11300		30.504	3.7075	1	827910	+		59761	22184	39937	39953	67765	67765					0.01889211863363016
TVVAKYYIKLD	11	Unmodified	_TVVAKYYIKLD_					0	0	0			REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|73|2|sense	REV__L1MA4A_dup2927|chr8:42025508-42029559:-|1.31207406795569|0.1410847084598031|3.22|63.0|73|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.25762939453125	3	438.255223	1311.74384	1.6079	0.00070467	4.045	0.0017727	5.6529	0.0024774	438.2569039821351	29.892	1.3479	29.877	29.524	30.872	-0.015167					99	34	5	0	0	0	0.73277	1	1515	1515		25.892	1.6599	1	559550	+		59762	29493	39938	39954	67766	67766					0.10043671951257238
TVVAVFSVSD	10	Unmodified	_TVVAVFSVSD_					0	0	0		ENSG00000113209|ENST00000231134|PCDHB5	ENSG00000113209|ENST00000231134|PCDHB5	ENSG00000113209|ENST00000231134|PCDHB5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.269775390625	2	512.27149	1022.52843	-0.050942	-2.6096E-05	-1.3311	-0.00068189	-1.382	-0.00070798	512.2706566332397	108.51	0.61991	108.47	108.2	108.82	-0.042412					33	22	2	0	0	0	0.77314	1	11842	11842		40.778	1.5253	1	1398600			59763	2703	39939	39955	67767	67767					0.018063304864767815
TVVAVFSVSD	10	Unmodified	_TVVAVFSVSD_					0	0	0		ENSG00000113209|ENST00000231134|PCDHB5	ENSG00000113209|ENST00000231134|PCDHB5	ENSG00000113209|ENST00000231134|PCDHB5	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	512.27149	1022.52843	-0.6533	-0.00033467	-0.58219	-0.00029824	-1.2355	-0.00063291	512.2710074402091	108.31	0.49201	108.31	108.11	108.6	0	-0.10885	0.001168	NaN	40.778	33	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1178700			59764	2703	39939	39955							0.018063304864767815
TVVAVFSVSD	10	Unmodified	_TVVAVFSVSD_					0	0	0		ENSG00000113209|ENST00000231134|PCDHB5	ENSG00000113209|ENST00000231134|PCDHB5	ENSG00000113209|ENST00000231134|PCDHB5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	512.27149	1022.52843	3.039	0.0015568	-4.1217	-0.0021114	-1.0827	-0.00055463	512.2692644682597	108.49	0.42975	108.46	108.24	108.67	-0.031487	0.040906	-0.0024584	NaN	40.778	30	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1394700			59765	2703	39939	39955							0.018063304864767815
TVVAVFSVSD	10	Unmodified	_TVVAVFSVSD_					0	0	0		ENSG00000113209|ENST00000231134|PCDHB5	ENSG00000113209|ENST00000231134|PCDHB5	ENSG00000113209|ENST00000231134|PCDHB5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	512.27149	1022.52843	0.57873	0.00029647	-1.7458	-0.00089434	-1.1671	-0.00059787	512.2705242449981	108.4	0.36824	108.44	108.26	108.63	0.034355	0.020039	-2.4243E-05	NaN	40.778	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1548600			59766	2703	39939	39955							0.018063304864767815
TVVDEKVETGT	11	Unmodified	_TVVDEKVETGT_					0	0	0			REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3007202148438	2	589.300975	1176.5874	3.3398	0.0019682	-2.664	-0.0015699	0.67578	0.00039824	589.2993345242088	110.41	1.0875	110.38	110.19	111.28	-0.027634					49	31	2	0	0	0	0.48313	1	12214	12214		53.089	5.4316	1	498980	+		59767	16233	39940	39956	67768	67768					0.006167619901361832
TVVDEKVETGT	11	Unmodified	_TVVDEKVETGT_					0	0	0			REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	589.300975	1176.5874	3.3398	0.0019682	-2.664	-0.0015699	0.67578	0.00039824	589.2993345242088	110.41	1.0875	110.38	110.19	111.28	-0.027634	0.16804	-0.0032117	NaN	53.089	49	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	498980	+		59768	16233	39940	39956							0.006167619901361832
TVVDEKVETGT	11	Unmodified	_TVVDEKVETGT_					0	0	0			REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	589.300975	1176.5874	-0.63929	-0.00037673	1.4108	0.00083137	0.77149	0.00045464	589.3016592200305	110.28	1.1169	110.31	110.1	111.22	0.031746	0.09935	0.0015909	NaN	53.089	52	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	458940	+		59769	16233	39940	39956							0.006167619901361832
TVVDEKVETGT	11	Unmodified	_TVVDEKVETGT_					0	0	0			REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	589.300975	1176.5874	0.82429	0.00048575	0.70712	0.00041671	1.5314	0.00090246	589.3014045480314	110.03	0.4585	110.15	110.05	110.51	0.12289	-0.063211	0.00076156	NaN	53.089	24	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	776530	+		59770	16233	39940	39956							0.006167619901361832
TVVDEKVETGT	11	Unmodified	_TVVDEKVETGT_					0	0	0			REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	589.300975	1176.5874	0.88974	0.00052432	0.12295	7.2455E-05	1.0127	0.00059678	589.301015554148	110.12	0.73602	110.2	110.11	110.85	0.073685	-0.015979	7.3059E-05	NaN	53.089	27	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	581750	+		59771	16233	39940	39956							0.006167619901361832
TVVDEKVETGT	11	Unmodified	_TVVDEKVETGT_					0	0	0			REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	589.300975	1176.5874	-1.3243	-0.00078039	2.3506	0.0013852	1.0264	0.00060483	589.3023410763675	110.14	0.61723	110.14	110.02	110.64	0.0060425	-0.071286	0.0026986	NaN	53.089	27	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	502620	+		59772	16233	39940	39956							0.006167619901361832
TVVDEKVETGT	11	Unmodified	_TVVDEKVETGT_					0	0	0			REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	589.300975	1176.5874	1.5739	0.00092753	-0.32831	-0.00019348	1.2456	0.00073405	589.3006842522913	109.91	0.30151	109.98	109.85	110.15	0.06794	-0.23054	-0.0004588	NaN	53.089	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1744900	+		59773	16233	39940	39956							0.006167619901361832
TVVDEKVETGT	11	Unmodified	_TVVDEKVETGT_					0	0	0			REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	REV__nc|ENSG00000020129|Q9UBB6-2|NCDN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	589.300975	1176.5874	5.5591	0.003276	-4.4954	-0.0026491	1.0637	0.00062683	589.2982955278248	109.91	0.31411	109.98	109.86	110.17	0.068001	-0.23623	-0.0053701	NaN	53.089	27	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1184600	+		59774	16233	39940	39956							0.006167619901361832
TVVDPAQRSR	10	Unmodified	_TVVDPAQRSR_					0	0	0		ENST00000484153.1_1_1:11826815-11837330:+|nuORF;ENSG00000215910|ENST00000688073|C1orf167;nc|nan|Q5SNV9-2|C1orf167	ENST00000484153.1_1_1:11826815-11837330:+|nuORF	ENST00000484153.1_1_1:11826815-11837330:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	564.8102416992188	2	564.809636	1127.60472	1.4564	0.00082257	-0.037051	-2.0927E-05	1.4193	0.00080164	564.8095113497515	109.89	1.6808	109.93	109.61	111.29	0.033096					159	64	3	0	0	0	0.82886	1	12047	12047		37.812	0	1	3333200			59775	8656	39941	39957	67769	67769					0.04602147106470511
TVVEPLKPPAL	11	Unmodified	_TVVEPLKPPAL_					0	0	0		nc|ENSG00000132849|Q8NI35|PATJ;ENSG00000132849|ENST00000642238|PATJ;nc|ENSG00000132849|Q8NI35-4|PATJ;ENST00000459752.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-3|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ	nc|ENSG00000132849|Q8NI35|PATJ	nc|ENSG00000132849|Q8NI35|PATJ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3523559570312	2	582.355357	1162.69616	-0.043239	-2.518E-05	-2.2335	-0.0013007	-2.2767	-0.0013259	582.3539101386576	15.424	0.35997	15.341	15.161	15.521	-0.083363					32	15	4	0	0	0	0.7144	1	34	34		29.17	3.596	1	274470			59776	3834	39942	39958	67770	67770					0.12132017751082458
TVVHFVSR	8	Unmodified	_TVVHFVSR_					0	0	0			REV__ENSG00000137831|ENST00000322954|UACA	REV__ENSG00000137831|ENST00000322954|UACA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7679138183594	2	472.769252	943.52395	-1.1355	-0.00053681	-3.1204	-0.0014752	-4.2559	-0.002012	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.87922	1	7769	7769		31.955	1.4512	1	292450	+		59777	19415	39943	39959	67771	67771					0.04992910854230104
TVVIFVVIC	9	Unmodified	_TVVIFVVIC_					0	0	0		ENST00000559527.1_1_15:51023229-51039693:-|nuORF;ENSG00000138600|ENST00000261854|SPPL2A	ENST00000559527.1_1_15:51023229-51039693:-|nuORF	ENST00000559527.1_1_15:51023229-51039693:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.7979431152344	2	496.796089	991.577625	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.053	1	36.493	35.993	36.993	0.44043								0	0	0	0.28877	1	2823	2823		35.201	7.3185	1				59778	4305	39944	39960	67772	67772					0.08149947241713562
TVWRSRFV	8	Unmodified	_TVWRSRFV_					0	0	0		nc|ENSG00000001497|Q9Y4W2-3|LAS1L	nc|ENSG00000001497|Q9Y4W2-3|LAS1L	nc|ENSG00000001497|Q9Y4W2-3|LAS1L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7823486328125	2	525.795801	1049.57705	-0.40331	-0.00021206	3.1798	0.0016719	2.7764	0.0014598	525.7974918254396	47.518	0.11107	47.99	47.935	48.047	0.47139					4	2	2	0	0	0	0.4196	1	4535	4535		35.201	3.2459	1	1272400			59779	14727	39945	39961	67773	67773					0.05424288636891106
TWFWRMVKERF	11	Unmodified	_TWFWRMVKERF_					0	0	0			REV__nc|ENSG00000119682|O15033-2|AREL1	REV__nc|ENSG00000119682|O15033-2|AREL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.2725830078125	3	529.274734	1584.80237	0.3219	0.00017037	-3.495	-0.0018498	-3.1731	-0.0016795	529.2728093370938	74.978	0.95219	75.369	74.912	75.864	0.3911					82	22	5	0	0	0	0.81219	1	8459	8459		8.7993	0	1	3054000	+		59780	18368	39946	39962	67774	67774					0.03336450044753292
TWGKGFTK	8	Unmodified	_TWGKGFTK_					0	0	0			REV__ENST00000473758.5_1_14:23537472-23537793:-|nuORF	REV__ENST00000473758.5_1_14:23537472-23537793:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	462.7509460449219	2	462.750527	923.486502	-0.7843	-0.00036294	0.51895	0.00024014	-0.26536	-0.00012279	462.75053665918585	47.326	0.48594	47.299	47.027	47.513	-0.026737					23	14	2	0	0	0	0.90837	1	3946	3946		56.721	23.909	1	200280	+		59781	27286	39947	39963	67775	67775					0.021698195886187932
TWHRRETLH	9	Unmodified	_TWHRRETLH_					0	0	0			REV__ENST00000290795.7_1_1:46124762-46124795:-|nuORF	REV__ENST00000290795.7_1_1:46124762-46124795:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	618.3248291015625	2	618.323245	1234.63194	2.3149	0.0014314	1.3231	0.00081808	3.638	0.0022495	618.3238221558079	107.78	0.49619	107.88	107.44	107.93	0.10396					48	21	3	0	0	0	0.19818	1	13130	13130		74.255	23.062	1	2781200	+		59782	24661	39948	39964	67776	67776					0.02400675437525024
TWHRRETLH	9	Unmodified	_TWHRRETLH_					0	0	0			REV__ENST00000290795.7_1_1:46124762-46124795:-|nuORF	REV__ENST00000290795.7_1_1:46124762-46124795:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	618.324462890625	2	618.323245	1234.63194	5.2473	0.0032445	-1.9984	-0.0012357	3.2489	0.0020088	618.321911631175	107.75	0.58365	107.87	107.33	107.91	0.11715					47	25	2	0	0	0	0.35373	1	13181	13181		60.972	9.7792	1	3762300	+		59783	24661	39948	39964	67777	67777					0.02400675437525024
TWHRRETLH	9	Unmodified	_TWHRRETLH_					0	0	0			REV__ENST00000290795.7_1_1:46124762-46124795:-|nuORF	REV__ENST00000290795.7_1_1:46124762-46124795:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	618.323245	1234.63194	2.3149	0.0014314	1.3231	0.00081808	3.638	0.0022495	618.3238221558079	107.78	0.49619	107.88	107.44	107.93	0.10396	0.0091258	0.002583	NaN	74.255	48	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2781200	+		59784	24661	39948	39964							0.02400675437525024
TWHRRETLH	9	Unmodified	_TWHRRETLH_					0	0	0			REV__ENST00000290795.7_1_1:46124762-46124795:-|nuORF	REV__ENST00000290795.7_1_1:46124762-46124795:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	618.323245	1234.63194	5.2473	0.0032445	-1.9984	-0.0012357	3.2489	0.0020088	618.321911631175	107.75	0.58365	107.87	107.33	107.91	0.11715	-0.0091258	-0.0015245	NaN	74.255	47	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3762300	+		59785	24661	39948	39964							0.02400675437525024
TWHVNERREGP	11	Unmodified	_TWHVNERREGP_					0	0	0			REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	461.7412414550781	3	460.897092	1379.66945	0.64285	0.00029629	-0.31432	-0.00014487	0.32854	0.00015142	460.8969544021353	20.687	0.46966	20.666	20.462	20.932	-0.020922					37	23	2	0	0	0	0.17955	1	503	503		17.833	7.7292	1	88001	+		59786	29195	39949	39965	67778	67778					-0.00520278087560655
TWHVNERREGP	11	Unmodified	_TWHVNERREGP_					0	0	0			REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	460.897092	1379.66945	-2.1268	-0.00098024	2.1418	0.00098715	0.015004	6.9151E-06	460.89801256819413	20.763	0.41854	20.763	20.508	20.926	0	-0.026485	0.0029633	NaN	12.957	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28058	+		59787	29195	39949	39965							-0.00520278087560655
TWHVNERREGP	11	Unmodified	_TWHVNERREGP_					0	0	0			REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	460.897092	1379.66945	0.89345	0.00041179	-0.74993	-0.00034564	0.14352	6.6146E-05	460.89663412176947	20.64	0.56618	20.708	20.391	20.957	0.068251	-0.081103	-0.001035	NaN	12.957	50	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80164	+		59788	29195	39949	39965							-0.00520278087560655
TWHVNERREGP	11	Unmodified	_TWHVNERREGP_					0	0	0			REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	460.897092	1379.66945	-0.33286	-0.00015341	0.25784	0.00011884	-0.075017	-3.4575E-05	460.89721440721814	20.991	0.7784	20.926	20.653	21.432	-0.064743	0.13672	0.00035841	NaN	12.957	63	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82518	+		59789	29195	39949	39965							-0.00520278087560655
TWHVNERREGP	11	Unmodified	_TWHVNERREGP_					0	0	0			REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	460.897092	1379.66945	0.3777	0.00017408	-0.52948	-0.00024404	-0.15178	-6.9954E-05	460.8968381342131	21.01	0.66901	20.946	20.665	21.334	-0.064058	0.15625	-0.00073021	NaN	12.957	59	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98451	+		59790	29195	39949	39965							-0.00520278087560655
TWHVNERREGP	11	Unmodified	_TWHVNERREGP_					0	0	0			REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	460.897092	1379.66945	-1.223	-0.00056369	0.74032	0.00034121	-0.4827	-0.00022248	460.897409828486	20.919	0.43866	20.964	20.679	21.118	0.045401	0.17487	0.0010255	NaN	12.957	42	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78777	+		59791	29195	39949	39965							-0.00520278087560655
TWHVNERREGP	11	Unmodified	_TWHVNERREGP_					0	0	0			REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	REV__ENST00000591417.5_1_19:37838705-37850429:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	460.897092	1379.66945	0.043157	1.9891E-05	0.036641	1.6888E-05	0.079797	3.6778E-05	460.8970573507183	20.477	0.39504	20.553	20.344	20.739	0.075848	-0.23658	5.2556E-05	NaN	12.957	35	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83388	+		59792	29195	39949	39965							-0.00520278087560655
TWIFLIVL	8	Unmodified	_TWIFLIVL_					0	0	0		ENST00000343813.9_1_1:6285031-6285133:-|nuORF	ENST00000343813.9_1_1:6285031-6285133:-|nuORF	ENST00000343813.9_1_1:6285031-6285133:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	502.8141174316406	2	502.812596	1003.61064	1.4802	0.00074428	1.1686	0.00058758	2.6488	0.0013319	502.81319262622696	97.079	3.8751	97.469	96.863	100.74	0.39065					217	95	5	0	0	0	0.86791	1	11779	11779		28.254	0	1	11311000			59793	10281	39950	39966	67779	67779					0.10897897356085195
TWIIVKDSSVF	11	Unmodified	_TWIIVKDSSVF_					0	0	0			REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2395324707031	3	432.239573	1293.69689	-1.0135	-0.00043808	1.3093	0.00056595	0.29583	0.00012787	432.2399401824171	58.768	0.66859	59.16	58.941	59.61	0.39209					34	15	3	0	0	0	0.71803	1	6171	6171		28.577	4.3449	1	484600	+		59794	17010	39951	39967	67780	67780					0.0617881240011684
TWIIVKDSSVF	11	Unmodified	_TWIIVKDSSVF_					0	0	0			REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	432.239573	1293.69689	-1.0135	-0.00043808	1.3093	0.00056595	0.29583	0.00012787	432.2399401824171	58.768	0.66859	59.16	58.941	59.61	0.39209	-0.030267	0.00079235	NaN	28.577	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	484600	+		59795	17010	39951	39967							0.0617881240011684
TWIIVKDSSVF	11	Unmodified	_TWIIVKDSSVF_					0	0	0			REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	432.239573	1293.69689	0.22175	9.5849E-05	0.094953	4.1042E-05	0.3167	0.00013689	432.2393692378889	58.667	0.73728	59.22	58.837	59.574	0.55323	0.030267	-0.00078236	NaN	28.577	36	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	402810	+		59796	17010	39951	39967							0.0617881240011684
TWKKIMRLGRK	11	Unmodified	_TWKKIMRLGRK_					0	0	0		nc|ENSG00000124496|Q96PN7-2|TRERF1;nc|ENSG00000124496|Q96PN7-3|TRERF1;nc|ENSG00000124496|Q96PN7-4|TRERF1;nc|ENSG00000124496|Q96PN7-5|TRERF1;nc|ENSG00000124496|Q96PN7|TRERF1;ENSG00000124496|ENST00000695948|TRERF1	nc|ENSG00000124496|Q96PN7-2|TRERF1	nc|ENSG00000124496|Q96PN7-2|TRERF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.9577941894531	3	472.958858	1415.85474	0.74004	0.00035001	-3.5345	-0.0016717	-2.7945	-0.0013217	472.9572235267456	34.131	1.5761	34.341	33.44	35.016	0.21002					95	37	4	0	0	0	0.75121	1	2522	2522		21.78	4.6137	1	2079600			59797	3337	39952	39968	67781	67781					0.16345033178367885
TWKRVPANY	9	Unmodified	_TWKRVPANY_					0	0	0		ENST00000596341.5_1_19:58986839-58987022:+|nuORF	ENST00000596341.5_1_19:58986839-58987022:+|nuORF	ENST00000596341.5_1_19:58986839-58987022:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.8040771484375	2	567.806365	1133.59818	1.1991	0.00068084	-1.879	-0.0010669	-0.67999	-0.0003861	567.8052763873685	55.748	0.70451	56.308	55.691	56.395	0.55953					33	16	3	0	0	0	0.67345	1	5758	5758		42.396	1.618	1	554830			59798	14334	39953	39969	67782	67782					0.03672253945751436
TWKRVPANY	9	Unmodified	_TWKRVPANY_					0	0	0		ENST00000596341.5_1_19:58986839-58987022:+|nuORF	ENST00000596341.5_1_19:58986839-58987022:+|nuORF	ENST00000596341.5_1_19:58986839-58987022:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	567.806365	1133.59818	0.23588	0.00013393	-0.90002	-0.00051104	-0.66415	-0.00037711	567.8056278259734	55.897	0.90369	56.298	55.571	56.475	0.40101	-0.0046501	0.00071818	NaN	42.396	41	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	515490			59799	14334	39953	39969							0.03672253945751436
TWLLRFSITK	10	Unmodified	_TWLLRFSITK_					0	0	0			REV__ENST00000429998.2_6:34247884-34248028:+|nuORF	REV__ENST00000429998.2_6:34247884-34248028:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.24285888671875	3	422.251924	1263.73394	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.136	1	74.179	73.679	74.679	0.0429								0	0	0	0.45132	1	7081	7081		26.063	2.6855	1		+		59800	26596	39954	39970	67783	67783					0.11262528736551758
TWMKRRRKRR	10	Unmodified	_TWMKRRRKRR_					0	0	0		ENST00000456150.5_1_3:47618647-47618728:-|nuORF	ENST00000456150.5_1_3:47618647-47618728:-|nuORF	ENST00000456150.5_1_3:47618647-47618728:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.29888916015625	3	491.965117	1472.87352	2.8447	0.0013995	2.1401	0.0010529	4.9848	0.0024524	491.966233992045	112.32	0.46088	112.3	112.19	112.65	-0.025414					21	9	3	0	0	0	0.37624	1	12413	12413		10.104	6.8926	1	574590			59801	11963	39955	39971	67784	67784					0.15600007592775
TWPRGLLGL	9	Unmodified	_TWPRGLLGL_					0	0	0		ENST00000530562.5_1_11:74656092-74660222:-|nuORF	ENST00000530562.5_1_11:74656092-74660222:-|nuORF	ENST00000530562.5_1_11:74656092-74660222:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7981262207031	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.516	1	43.516	43.016	44.016	0								0	0	0	0.30778	1	3092	3092		27.882	1.0861	1				59802	13348	39956	39972	67785	67785					0.0812205692243424
TWRKRRRRQLW	11	Unmodified	_TWRKRRRRQLW_					0	0	0			REV__ENST00000540691.5_2_19:18671277-18672912:+|nuORF	REV__ENST00000540691.5_2_19:18671277-18672912:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	547.9952392578125	3	547.993953	1640.96003	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.442	1	26.551	26.051	27.051	0.10901								0	0	0	0.56276	1	1011	1011		5.1424	1.931	1		+		59803	28468	39957	39973	67786	67786					0.16518710419018134
TWRLGLGLGGR	11	Unmodified	_TWRLGLGLGGR_					0	0	0		ENST00000586064.3_1_19:19368617-19368821:-|nuORF	ENST00000586064.3_1_19:19368617-19368821:-|nuORF	ENST00000586064.3_1_19:19368617-19368821:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.34423828125	2	593.346189	1184.67783	-0.64573	-0.00038314	-2.3039	-0.001367	-2.9496	-0.0017502	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.7144	1	11247	11247		29.17	2.4771	1	2296600			59804	14156	39958	39974	67787	67787					0.09287320619750972
TWSYCPHCC	9	Unmodified	_TWSYCPHCC_					0	0	0		ENST00000317961.8_2_Y:21868493-21868709:-|nuORF	ENST00000317961.8_2_Y:21868493-21868709:-|nuORF	ENST00000317961.8_2_Y:21868493-21868709:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.1961059570312	2	550.193348	1098.37214	1.64	0.00090229	3.7554	0.0020662	5.3954	0.0029685	550.1952795933956	27.001	0.87865	26.66	26.232	27.11	-0.34035					43	19	3	0	0	0	0.7932	1	1555	1555		21.96	1.013	1	1067300			59805	9999	39959	39975	67788	67788					-0.17310897551669768
TWVPYASS	8	Unmodified	_TWVPYASS_					0	0	0			REV__ENSG00000085760|ENST00000263629|MTIF2	REV__ENSG00000085760|ENST00000263629|MTIF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.7169494628906	2	455.718893	909.423233	0.38579	0.00017581	-3.6265	-0.0016527	-3.2407	-0.0014769	455.71714049044317	29.647	1.0742	29.557	28.974	30.048	-0.089546					53	24	3	0	0	0	0.884	1	1899	1899		33.516	4.366	1	379620	+		59806	16897	39960	39976	67789	67789					-0.03510165919283281
TWYVRKQREIL	11	Unmodified	_TWYVRKQREIL_					0	0	0		nc|ENSG00000275410|P35680-4|HNF1B;nc|ENSG00000275410|P35680-2|HNF1B;ENSG00000275410|ENST00000617811|HNF1B;nc|ENSG00000275410|P35680-3|HNF1B	nc|ENSG00000275410|P35680-4|HNF1B	nc|ENSG00000275410|P35680-4|HNF1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.2857971191406	3	497.952537	1490.83578	-0.23329	-0.00011617	-2.7583	-0.0013735	-2.9915	-0.0014896	497.9511036347425	24.221	1.0288	24.175	23.523	24.551	-0.04598					53	23	4	0	0	0	0.75906	1	917	917		20.03	0.7678	1	99074			59807	9003	39961	39977	67790	67790					0.1099977508831671
TYAKLVQLL	9	Unmodified	_TYAKLVQLL_					0	0	0			REV__ENST00000529132.1_1_11:67173299-67173527:+|nuORF	REV__ENST00000529132.1_1_11:67173299-67173527:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8270263671875	2	524.823692	1047.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.2	1	102.15	101.65	102.65	-0.049828								0	0	0	0.30053	1	11149	11149		30.504	0.6621	1		+		59808	28261	39962	39978	67791	67791					0.11092077033845271
TYALILGG	8	Unmodified	_TYALILGG_					0	0	0			REV__ENSG00000176076|ENST00000372101|KCNE5	REV__ENSG00000176076|ENST00000372101|KCNE5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.2325439453125	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.87807	1	8254	8254		31.579	4.7828	1	4227600	+		59809	22105	39963	39979	67792	67792					0.04283612465758324
TYALILGG	8	Unmodified	_TYALILGG_					0	0	0			REV__ENSG00000176076|ENST00000372101|KCNE5	REV__ENSG00000176076|ENST00000372101|KCNE5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.232666015625	2	404.234179	806.453805	-0.39208	-0.00015849	-2.9155	-0.0011785	-3.3076	-0.001337	404.23288491550113	84.848	3.8677	85.296	83.349	87.217	0.44736					164	94	4	0	0	0	0.80963	1	9900	9900		15.636	0	1	3295900	+		59810	22105	39963	39979	67793	67793					0.04283612465758324
TYCLYLIAPIK	11	Unmodified	_TYCLYLIAPIK_					0	0	0			REV__nc|ENSG00000183527|O95456-2|PSMG1	REV__nc|ENSG00000183527|O95456-2|PSMG1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	649.3643798828125	2	649.364867	1296.71518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.696	1	66.082	65.582	66.582	0.38581								0	0	0	0.56276	1	7142	7142		39.253	6.4404	1		+		59811	22611	39964	39980	67794	67794					0.07869231050472081
TYEALFVTTW	10	Unmodified	_TYEALFVTTW_					0	0	0			REV__ENSG00000205678|ENST00000381210|TECRL	REV__ENSG00000205678|ENST00000381210|TECRL	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.8077392578125	2	615.805697	1229.59684	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.712	1	41.716	41.216	42.216	0.0043983								0	0	0	0.45132	1	2748	2748		37.159	5.2042	1		+		59812	23570	39965	39981	67795	67795					-0.008774249336966022
TYEEKLKLVA	10	Unmodified	_TYEEKLKLVA_					0	0	0		ENSG00000182827|ENST00000366812|ACBD3	ENSG00000182827|ENST00000366812|ACBD3	ENSG00000182827|ENST00000366812|ACBD3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.3587646484375	2	597.342446	1192.67034	3.0822	0.0018412	-1.3541	-0.00080888	1.7281	0.0010323	597.3415105726889	100.42	0.13299	100.37	100.27	100.4	-0.052116					4	2	2	0	0	0	0.37624	1	10887	10887		40.778	27.324	1	46603			59813	7475	39966	39982	67796	67796					0.08171123508805067
TYELKKKPI	9	Unmodified	_TYELKKKPI_					0	0	0		nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ENSG00000146463|ENST00000314607|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3412475585938	2	560.342249	1118.66995	-0.40673	-0.00022791	-3.2012	-0.0017938	-3.608	-0.0020217	560.3403756584778	102.5	3.9328	102.5	101.57	105.51	0					340	97	6	0	0	0	0.71772	4	10567	10543;10567;10625;10805		39.253	3.1702	1	60162000			59814	4849	39967	39983	67797;67798;67799;67800	67798					0.11535748579603933
TYELKKKPI	9	Unmodified	_TYELKKKPI_					0	0	0		nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ENSG00000146463|ENST00000314607|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.3402709960938	2	560.342249	1118.66995	-0.40072	-0.00022454	-2.6173	-0.0014666	-3.018	-0.0016911	560.340696960339	107.82	1.1221	107.82	106.75	107.87	0					48	26	2	0	0	0	0.77244	1	11171	11171		32.812	4.9302	1	6321700			59815	4849	39967	39983	67801	67801					0.11535748579603933
TYELKKKPI	9	Unmodified	_TYELKKKPI_					0	0	0		nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ENSG00000146463|ENST00000314607|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3402709960938	2	560.342249	1118.66995	-1.1297	-0.00063301	-2.5217	-0.001413	-3.6514	-0.002046	560.3407625905494	102.44	3.5444	102.46	101.86	105.4	0.01989					383	85	7	0	0	0	0.69624	2	11068	10919;11068		40.778	4.733	1	84412000			59816	4849	39967	39983	67802;67803	67803					0.11535748579603933
TYELKKKPI	9	Unmodified	_TYELKKKPI_					0	0	0		nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ENSG00000146463|ENST00000314607|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3408203125	2	560.342249	1118.66995	-1.4184	-0.00079481	-2.3281	-0.0013045	-3.7465	-0.0020993	560.3408991920513	102.18	3.487	102.32	101.71	105.2	0.13569					387	86	7	0	0	0	0.76255	3	10926	10641;10926;11091		35.618	5.0025	1	120110000			59817	4849	39967	39983	67804;67805;67806	67805					0.11535748579603933
TYELKKKPI	9	Unmodified	_TYELKKKPI_					0	0	0		nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ENSG00000146463|ENST00000314607|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3408203125	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	1	12176	12176		26.693	1.1189	1	4071000			59818	4849	39967	39983	67807	67807					0.11535748579603933
TYFCKSKW	8	Unmodified	_TYFCKSKW_					0	0	0			REV__nc|ENSG00000117525|P13726-2|F3	REV__nc|ENSG00000117525|P13726-2|F3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.758544921875	2	531.757495	1061.50044	-0.0035221	-1.8729E-06	2.5384	0.0013498	2.5349	0.0013479	531.7587300416486	83.002	0.86864	83.433	83.087	83.956	0.43108					51	20	3	0	0	0	0.92973	1	9616	9616		50.025	0.58299	1	1395300	+		59819	18267	39968	39984	67808	67808					-0.027852709745957327
TYFKRHKRLRK	11	Unmodified	_TYFKRHKRLRK_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.64984130859375	3	511.647671	1531.92118	-0.051583	-2.6392E-05	3.0592	0.0015652	3.0076	0.0015389	511.6491752887139	107.91	0.36322	107.87	107.52	107.89	-0.042404					15	8	2	0	0	0	0.79224	1	11761	11761		12.957	3.7457	1	54737000	+		59820	23707	39969	39985	67809	67809					0.17649985064622342
TYFKRHKRLRK	11	Unmodified	_TYFKRHKRLRK_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.98455810546875	3	511.647671	1531.92118	0.81383	0.00041639	3.5933	0.0018385	4.4071	0.0022549	511.6493824925329	108.86	1.0177	108.94	108.26	109.28	0.082726					67	40	2	0	0	0	0.75457	2	11714	11679;11714		21.032	8.0748	1	1632900	+		59821	23707	39969	39985	67810;67811	67811					0.17649985064622342
TYFKRHKRLRK	11	Unmodified	_TYFKRHKRLRK_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.6497802734375	3	511.647671	1531.92118	5.2658	0.0026942	-1.3071	-0.00066875	3.9587	0.0020255	511.64699338748306	107.86	0.25144	107.97	107.79	108.04	0.11715					12	7	2	0	0	0	0.7896	1	13198	13198		13.508	7.1871	1	6356200	+		59822	23707	39969	39985	67812	67812					0.17649985064622342
TYFKRHKRLRK	11	Unmodified	_TYFKRHKRLRK_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	511.647671	1531.92118	0.53897	0.00027576	3.5042	0.0017929	4.0432	0.0020687	511.9839111214803	108.77	0.71056	108.8	108.53	109.24	0.034355	-0.17102	-0.0012178	NaN	21.032	43	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	780440	+		59823	23707	39969	39985							0.17649985064622342
TYFKRHKRLRK	11	Unmodified	_TYFKRHKRLRK_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	511.647671	1531.92118	0.81383	0.00041639	3.5933	0.0018385	4.4071	0.0022549	511.6493824925329	108.86	1.0177	108.94	108.26	109.28	0.082726	-0.034855	-0.0010811	NaN	21.032	67	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1632900	+		59824	23707	39969	39985							0.17649985064622342
TYFKRHKRLRK	11	Unmodified	_TYFKRHKRLRK_					0	0	0			REV__ENSG00000221843|ENST00000447166|C2orf16	REV__ENSG00000221843|ENST00000447166|C2orf16	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	511.647671	1531.92118	-1.5771	-0.0008069	5.8652	0.0030009	4.2882	0.002194	511.65054253478496	109.03	0.71272	109.05	108.56	109.28	0.020561	0.079897	0.0024062	NaN	21.032	53	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	628000	+		59825	23707	39969	39985							0.17649985064622342
TYFLAVFK	8	Unmodified	_TYFLAVFK_					0	0	0			REV__ENSG00000174339|ENST00000307832|OR2Y1	REV__ENSG00000174339|ENST00000307832|OR2Y1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7803039550781	2	494.778754	987.542954	-0.98597	-0.00048784	4.4639	0.0022086	3.4779	0.0017208	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.87479	1	8391	8391		30.504	5.0535	1	385180	+		59826	21985	39970	39986	67813	67813					0.04868447425292288
TYFQKVSD	8	Unmodified	_TYFQKVSD_					0	0	0			REV__ENSG00000175567|ENST00000663595|UCP2	REV__ENSG00000175567|ENST00000663595|UCP2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.3009948730469	2	494.242732	986.470912	-0.8279	-0.00040918	-3.5243	-0.0017419	-4.3522	-0.002151	494.241355350674	97.656	0.72664	97.656	97.337	98.063	0					21	16	2	0	0	0	0.4196	1	9856	9856		58.782	28.464	1	122830	+		59827	22073	39971	39987	67814	67814					-0.022865117190917772
TYFQKVSD	8	Unmodified	_TYFQKVSD_					0	0	0			REV__ENSG00000175567|ENST00000663595|UCP2	REV__ENSG00000175567|ENST00000663595|UCP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3009033203125	2	494.242732	986.470912	2.2787	0.0011262	1.4959	0.00073934	3.7746	0.0018656	494.24501537471144	97.396	0.79813	97.34	96.889	97.687	-0.055542					32	18	3	0	0	0	0.4196	1	10432	10432		53.351	16.192	1	112180	+		59828	22073	39971	39987	67815	67815					-0.022865117190917772
TYFTRLLRVV	10	Unmodified	_TYFTRLLRVV_					0	0	0			REV__ENSG00000067704|ENST00000366922|IARS2	REV__ENSG00000067704|ENST00000366922|IARS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.376953125	2	634.379697	1266.74484	-0.13802	-8.7559E-05	-3.8404	-0.0024363	-3.9784	-0.0025238	634.3770517234923	117.28	0.25537	117.21	117	117.26	-0.07531					24	8	3	0	0	0	0.86218	1	12586	12586		32.812	7.2384	1	1742800	+		59829	16547	39972	39988	67816	67816					0.12213931110818521
TYFTRLLRVV	10	Unmodified	_TYFTRLLRVV_					0	0	0			REV__ENSG00000067704|ENST00000366922|IARS2	REV__ENSG00000067704|ENST00000366922|IARS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3767700195312	2	634.379697	1266.74484	-0.13799	-8.754E-05	-4.0042	-0.0025402	-4.1422	-0.0026277	634.3769981917211	117.62	0.35755	117.55	117.34	117.69	-0.07531					32	12	3	0	0	0	0.85694	1	12602	12602		21.96	3.6978	1	1153300	+		59830	16547	39972	39988	67817	67817					0.12213931110818521
TYFTRLLRVV	10	Unmodified	_TYFTRLLRVV_					0	0	0			REV__ENSG00000067704|ENST00000366922|IARS2	REV__ENSG00000067704|ENST00000366922|IARS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3764038085938	2	634.379697	1266.74484	-1.1773	-0.00074688	-3.1342	-0.0019883	-4.3115	-0.0027352	634.3774291341157	112.05	1.1748	112.03	111.8	112.98	-0.019882					84	36	4	0	0	0	0.85694	2	11927	11927;11970		29.15	1.2673	1	22589000	+		59831	16547	39972	39988	67818;67819	67818					0.12213931110818521
TYGEIFEKF	9	Unmodified	_TYGEIFEKF_					0	0	0		nc|ENSG00000151366|O95298-2|NDUFC2;ENSG00000151366|ENST00000281031|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.2802124023438	2	567.279315	1132.54408	0.54817	0.00031097	-0.24179	-0.00013716	0.30639	0.00017381	567.2788805491856	68.545	1.0788	68.93	68.569	69.648	0.38483					54	25	3	0	0	0	0.066118	3	7557	7529;7547;7557		101.25	46.374	1	419640			59832	5111	39973	39989	67820;67821;67822	67822					-0.016893829964601537
TYGEIFEKF	9	Unmodified	_TYGEIFEKF_					0	0	0		nc|ENSG00000151366|O95298-2|NDUFC2;ENSG00000151366|ENST00000281031|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.2783813476562	2	567.279315	1132.54408	0.56529	0.00032067	-0.45057	-0.0002556	0.11471	6.5075E-05	567.2788884635158	68.397	1.2518	68.943	68.616	69.868	0.54694					54	29	2	0	0	0	0.096326	4	7576	7536;7547;7576;7589		93.143	28.936	1	515450			59833	5111	39973	39989	67823;67824;67825;67826	67825					-0.016893829964601537
TYGGKLTKIAV	11	Unmodified	_TYGGKLTKIAV_					0	0	0			REV__ENST00000487222.5_1_7:100401085-100421908:-|nuORF	REV__ENST00000487222.5_1_7:100401085-100421908:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8429565429688	2	575.845156	1149.67576	0.60609	0.00034901	-4.3948	-0.0025308	-3.7888	-0.0021817	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.61369	1	9060	9060		42.864	2.2917	1	2381900	+		59834	23124	39974	39990	67827	67827					0.10690847091268552
TYGKPVHH	8	Unmodified	_TYGKPVHH_					0	0	0		nc|ENSG00000174748|P61313-2|RPL15;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENSG00000174748|ENST00000307839|RPL15	nc|ENSG00000174748|P61313-2|RPL15	nc|ENSG00000174748|P61313-2|RPL15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.745849609375	2	469.745776	937.477	-0.2988	-0.00014036	-0.2192	-0.00010297	-0.51801	-0.00024333	469.74547175050435	17.661	0.39927	17.05	16.844	17.243	-0.6107					20	10	3	0	0	0	0.91005	1	299	299		42.474	5.3154	1	191670			59835	6961	39975	39991	67828	67828					0.005760513030850234
TYGKPVHH	8	Unmodified	_TYGKPVHH_					0	0	0		nc|ENSG00000174748|P61313-2|RPL15;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENSG00000174748|ENST00000307839|RPL15	nc|ENSG00000174748|P61313-2|RPL15	nc|ENSG00000174748|P61313-2|RPL15	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	469.745776	937.477	0.40167	0.00018868	-0.94397	-0.00044343	-0.54231	-0.00025475	469.7451391744694	17.565	0.33389	17.082	16.898	17.232	-0.48256	0.016089	-0.00026605	NaN	42.474	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133220			59836	6961	39975	39991							0.005760513030850234
TYGLQKITLL	10	Unmodified	_TYGLQKITLL_					0	0	0		ENST00000574210.5_1_17:2597327-2598221:-|nuORF;nc|ENSG00000132361|O75153|CLUH;ENSG00000132361|ENST00000651024|CLUH	ENST00000574210.5_1_17:2597327-2598221:-|nuORF	ENST00000574210.5_1_17:2597327-2598221:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.345703125	2	575.347532	1148.68051	-0.3799	-0.00021857	-2.6981	-0.0015524	-3.078	-0.0017709	575.3459117588899	98.957	2.3582	98.957	98.457	100.82	0					160	56	5	0	0	0	0.86587	1	10007	10007		29.17	2.374	1	2637800			59837	3788	39976	39992	67829	67829					0.11211731234061517
TYGLRVLNL	9	Unmodified	_TYGLRVLNL_					0	0	0		ENST00000445067.6_1_1:111743395-111743506:+|nuORF	ENST00000445067.6_1_1:111743395-111743506:+|nuORF	ENST00000445067.6_1_1:111743395-111743506:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.826904296875	2	524.811116	1047.60768	-0.1354	-7.106E-05	-1.3105	-0.00068777	-1.4459	-0.00075883	524.8104020576516	98.944	0.36574	99.166	98.921	99.287	0.22262					12	8	2	0	0	0	0.20789	1	10253	10253		51.335	19.381	1	235160			59838	11818	39977	39993	67830	67830					0.08578022231267823
TYGLVFSL	8	Unmodified	_TYGLVFSL_					0	0	0			REV__ENST00000479135.5_1_22:29673993-29684776:+|nuORF	REV__ENST00000479135.5_1_22:29673993-29684776:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2744445800781	2	450.247286	898.48002	-1.1023	-0.00049632	-0.62618	-0.00028194	-1.7285	-0.00077825	450.2473054037112	93.494	0.77051	93.494	92.981	93.752	0					20	17	2	0	0	0	0.4196	1	9174	9174		31.955	11.473	1	143330	+		59839	27395	39978	39994	67831	67831					0.026718816372408583
TYHGNYHL	8	Unmodified	_TYHGNYHL_					0	0	0			REV__ENST00000554270.5_1_14:88936247-89016761:-|nuORF	REV__ENST00000554270.5_1_14:88936247-89016761:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8139953613281	2	502.732866	1003.45118	2.2993	0.0011559	0.37429	0.00018817	2.6735	0.0013441	502.7332093586613	97.165	0.37912	97.11	96.975	97.354	-0.055542					9	8	2	0	0	0	0.4196	1	10438	10438		40.573	1.7665	1	29351	+		59840	16614	39979	39995	67832	67832					-0.05040842939183676
TYIIYLFL	8	Unmodified	_TYIIYLFL_					0	0	0			REV__ENSG00000112164|ENST00000373256|GLP1R	REV__ENSG00000112164|ENST00000373256|GLP1R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.303955078125	2	523.302062	1044.58957	3.0919	0.001618	0.19532	0.00010221	3.2872	0.0017202	523.3019807160215	101.24	1.6009	101.19	100.54	102.14	-0.049835					80	37	4	0	0	0	0.87276	1	11029	11029		29.842	4.3914	1	999760	+		59841	17921	39980	39996	67833	67833					0.06905887256561982
TYKDIKKEM	9	Unmodified	_TYKDIKKEM_					0	0	0			REV__ENST00000425147.1_1_21:26734448-26734742:+|nuORF	REV__ENST00000425147.1_1_21:26734448-26734742:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	578.8120727539062	2	578.307549	1154.60055	0.87917	0.00050843	4.4128	0.0025519	5.292	0.0030604	578.3098591180509	110.17	1.6008	110.24	110.06	111.66	0.073685					154	53	3	0	0	0	0.7932	1	11927	11927		25.574	2.9944	1	2193800	+		59842	26529	39981	39997	67834	67834					0.02942921568546808
TYKLFRAVPL	10	Unmodified	_TYKLFRAVPL_					0	0	0			REV__ENSG00000138246|ENST00000260818|DNAJC13	REV__ENSG00000138246|ENST00000260818|DNAJC13	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3695678710938	2	604.363516	1206.71248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.22	1	114.19	113.69	114.69	-0.024452								0	0	0	0.45132	1	12651	12651		10.265	0	1		+		59843	19452	39982	39998	67835	67835					0.11739143707859512
TYKLKRHM	8	Unmodified	_TYKLKRHM_					0	0	0		nc|ENSG00000124092|Q8NI51-9|CTCFL;nc|ENSG00000124092|Q8NI51-11|CTCFL;nc|ENSG00000124092|Q8NI51-6|CTCFL;nc|ENSG00000124092|Q8NI51-5|CTCFL;nc|ENSG00000124092|Q8NI51-10|CTCFL;nc|ENSG00000124092|Q8NI51-2|CTCFL;nc|ENSG00000124092|Q8NI51-8|CTCFL;ENSG00000124092|ENST00000243914|CTCFL;nc|ENSG00000124092|Q8NI51-3|CTCFL;nc|ENSG00000124092|Q8NI51-7|CTCFL;ENSG00000102974|ENST00000264010|CTCF;nc|ENSG00000102974|P49711-2|CTCF	nc|ENSG00000124092|Q8NI51-9|CTCFL;ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.806640625	2	538.805311	1075.59607	0.74987	0.00040403	1.8239	0.00098272	2.5738	0.0013868	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.884	1	9046	9046		33.516	4.366	1	840570			59844	14886;2039	39983	39999	67836	67836					0.061295019362887615
TYKQFVRR	8	Unmodified	_TYKQFVRR_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.3174438476562	2	549.314358	1096.61416	3.3171	0.0018221	2.7302	0.0014997	6.0473	0.0033219	549.3157779565678	101.02	2.3329	100.97	100.53	102.87	-0.052109					129	55	4	0	0	0	0.87479	1	10996	10996		30.504	7.924	1	1991000	+		59845	19182	39984	40000	67837	67837					0.06971960182659132
TYKQISTLAM	10	Unmodified	_TYKQISTLAM_					0	0	0		nc|ENSG00000166478|P52747-2|ZNF143;nc|ENSG00000166478|P52747-3|ZNF143;ENSG00000166478|ENST00000396602|ZNF143	nc|ENSG00000166478|P52747-2|ZNF143	nc|ENSG00000166478|P52747-2|ZNF143	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.8135375976562	2	578.307549	1154.60055	1.2052	0.00069697	3.9558	0.0022877	5.161	0.0029846	578.3097479926826	109.94	0.45293	110	109.84	110.29	0.058174					28	16	2	0	0	0	0.85981	1	13324	13324		35.152	2.3396	1	2899900			59846	6202	39985	40001	67838	67838					0.02942921568546808
TYKSLPKLV	9	Unmodified	_TYKSLPKLV_					0	0	0		nc|ENSG00000179915|Q9ULB1|NRXN1;nc|ENSG00000179915|Q9ULB1-2|NRXN1;ENSG00000179915|ENST00000401669|NRXN1;nc|ENSG00000179915|Q9ULB1-3|NRXN1	nc|ENSG00000179915|Q9ULB1|NRXN1	nc|ENSG00000179915|Q9ULB1|NRXN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.82763671875	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.72402	2	11065	11065;11101		38.806	6.8513	1	30867000			59847	7304	39986	40002	67839;67840	67839					0.11092077033845271
TYKVTAVPALA	11	Unmodified	_TYKVTAVPALA_					0	0	0			REV__nc|ENSG00000182333|P07098-2|LIPF	REV__nc|ENSG00000182333|P07098-2|LIPF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3300170898438	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.68532	1	9084	9084		33.922	1.1092	1	11042000	+		59848	22519	39987	40003	67841	67841					0.0881915819995811
TYKVTAVPALA	11	Unmodified	_TYKVTAVPALA_					0	0	0			REV__nc|ENSG00000182333|P07098-2|LIPF	REV__nc|ENSG00000182333|P07098-2|LIPF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3300170898438	2	567.331882	1132.64921	0.77491	0.00043963	-4.0071	-0.0022734	-3.2322	-0.0018337	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.59499	1	8936	8936		45.022	2.1579	1	6344600	+		59849	22519	39987	40003	67842	67842					0.0881915819995811
TYLALLAS	8	Unmodified	_TYLALLAS_					0	0	0			REV__ENSG00000109452|ENST00000262992|INPP4B	REV__ENSG00000109452|ENST00000262992|INPP4B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2454833984375	2	426.247286	850.48002	-0.1821	-7.7619E-05	-2.626	-0.0011193	-2.8081	-0.0011969	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.86288	1	8959	8959		26.796	5.0938	1	3805200	+		59850	17758	39988	40004	67843	67843					0.04879881637248218
TYLFTLSAII	10	Unmodified	_TYLFTLSAII_					0	0	0			REV__ENST00000475789.1_1_7:89789075-89791404:+|nuORF	REV__ENST00000475789.1_1_7:89789075-89791404:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	571.330810546875	2	571.328808	1140.64306	-0.35036	-0.00020017	4.3312	0.0024745	3.9808	0.0022744	571.3312644155609	102.52	1.12	102.52	102.02	103.14	0					76	28	4	0	0	0	0.85466	1	10500	10500		20.947	0.10978	1	1839200	+		59851	21100	39989	40005	67844	67844					0.07836639968422787
TYLKIVRDV	9	Unmodified	_TYLKIVRDV_					0	0	0		L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|28|2|sense	L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|28|2|sense	L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|28|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8305053710938	2	553.832049	1105.64954	-1.4397	-0.00079736	-1.5438	-0.00085498	-2.9835	-0.0016523	553.8309437406523	102.46	0.72263	102.59	102.26	102.98	0.13569					39	17	3	0	0	0	0.7932	1	10732	10732		26.693	3.6504	1	413090			59852	14611	39990	40006	67845	67845					0.10094577919790026
TYLLIPSLSL	10	Unmodified	_TYLLIPSLSL_					0	0	0			REV__nc|ENSG00000171291|Q8NDP4|ZNF439	REV__nc|ENSG00000171291|Q8NDP4|ZNF439	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3402709960938	2	560.336633	1118.65871	3.1377	0.0017581	3.0866	0.0017295	6.2243	0.0034877	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.86763	1	11439	11439		26.693	2.4902	1	83033000	+		59853	30026	39991	40007	67846	67846					0.1041292648549188
TYLLIPSLSL	10	Unmodified	_TYLLIPSLSL_					0	0	0			REV__nc|ENSG00000171291|Q8NDP4|ZNF439	REV__nc|ENSG00000171291|Q8NDP4|ZNF439	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.3406982421875	2	560.336633	1118.65871	2.9009	0.0016255	3.4846	0.0019525	6.3855	0.003578	560.3384791854071	101.98	1.2376	102.3	101.86	103.1	0.32511					132	30	6	0	0	0	0.8608	1	12467	12467		34.173	3.6689	1	15824000	+		59854	30026	39991	40007	67847	67847					0.1041292648549188
TYLTLRYE	8	Unmodified	_TYLTLRYE_					0	0	0			REV__ENSG00000114270|ENST00000681320|COL7A1	REV__ENSG00000114270|ENST00000681320|COL7A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	529.781494140625	2	529.779482	1057.54441	0.42447	0.00022488	2.5743	0.0013638	2.9988	0.0015887	529.7806756835065	55.443	1.0138	55.534	55.225	56.239	0.091167					76	34	3	0	0	0	0.8347	1	4681	4681		23.042	1.0826	1	514560	+		59855	18037	39992	40008	67848	67848					0.017940367233677534
TYPEILRSN	9	Unmodified	_TYPEILRSN_					0	0	0		ENSG00000109606|ENST00000336812|DHX15;ENST00000503562.1_1_4:24541566-24543501:-|nuORF	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.84130859375	2	546.787838	1091.56112	1.9884	0.0010872	-3.8536	-0.0021071	-1.8652	-0.0010199	547.2869622353993	100.39	0.20461	100.74	100.61	100.82	0.3459					5	4	2	0	0	0	0.20789	1	12190	12190		42.396	20.436	1	85241			59856	2468	39993	40009	67849	67849					0.019005376093446102
TYPKGTMTLGR	11	Unmodified	_TYPKGTMTLGR_					0	0	0		ENSG00000187672|ENST00000288221|ERC2;chr3:55950560-55992057|46|47.37|1.0|5.57|-|ENST00000492584|ERC2,ERC2	ENSG00000187672|ENST00000288221|ERC2	ENSG00000187672|ENST00000288221|ERC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.8790893554688	2	612.823898	1223.63324	0.28183	0.00017271	0.35672	0.00021861	0.63855	0.00039132	612.8258797428105	104.52	0.2393	104.56	104.47	104.71	0.039856					9	5	3	0	0	0	0.17484	1	11399	11399		46.457	0	1	139410			59857	407	39994	40010	67850	67850					0.03037128691403268
TYPLGVLL	8	Unmodified	_TYPLGVLL_					0	0	0			REV__ENST00000503921.5_1_5:96133011-96143586:-|nuORF	REV__ENST00000503921.5_1_5:96133011-96143586:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2634582519531	2	438.265479	874.516405	-1.0936	-0.00047928	-3.4121	-0.0014954	-4.5057	-0.0019747	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.83466	1	2748	2748		23.037	2.5549	1	2862500	+		59858	21065	39995	40011	67851	67851					0.0741275853396246
TYPLKVTVC	9	Unmodified	_TYPLKVTVC_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.282470703125	2	512.280803	1022.54705	-0.3427	-0.00017556	1.3496	0.0006914	1.0069	0.00051584	512.2814243636773	86.125	3.8841	86.31	84.842	88.726	0.18523					170	91	2	0	0	0	0.76255	1	8575	8575		35.618	0	1	381930	+		59859	20437;29946	39996	40012	67852	67852					0.03668168856677312
TYPQILLTL	9	Unmodified	_TYPQILLTL_					0	0	0			REV__ENST00000369976.5_1_1:109493016-109505032:-|nuORF	REV__ENST00000369976.5_1_1:109493016-109505032:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.31689453125	2	531.3157	1060.61685	2.5638	0.0013622	4.2767	0.0022723	6.8404	0.0036344	531.3177191515188	95.1	2.5434	95.042	94.557	97.1	-0.057526					188	59	5	0	0	0	0.76764	1	10292	10292		34.173	0	1	4072600	+		59860	25636	39997	40013	67853	67853					0.0889637079694694
TYQAISRVGLR	11	Unmodified	_TYQAISRVGLR_					0	0	0		ENST00000604381.5_1_12:51773598-51785401:-|nuORF;ENST00000543196.6_1_12:51773598-51777285:-|nuORF;ENST00000356317.7_1_12:51773598-51784704:-|nuORF	ENST00000604381.5_1_12:51773598-51785401:-|nuORF	ENST00000604381.5_1_12:51773598-51785401:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.3621826171875	2	632.362036	1262.70952	-0.02147	-1.3577E-05	-1.2001	-0.00075889	-1.2216	-0.00077247	632.3610016649177	103.12	0.68491	103.12	102.79	103.47	0					54	16	4	0	0	0	0.66929	1	10577	10577		36.447	2.2742	1	23395000			59861	10365	39998	40014	67854	67854					0.08867268583026089
TYQAISRVGLR	11	Unmodified	_TYQAISRVGLR_					0	0	0		ENST00000604381.5_1_12:51773598-51785401:-|nuORF;ENST00000543196.6_1_12:51773598-51777285:-|nuORF;ENST00000356317.7_1_12:51773598-51784704:-|nuORF	ENST00000604381.5_1_12:51773598-51785401:-|nuORF	ENST00000604381.5_1_12:51773598-51785401:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	632.3634033203125	2	632.362036	1262.70952	1.2218	0.00077264	-2.6507	-0.0016762	-1.4288	-0.00090354	632.3601839093275	102.92	0.65614	102.96	102.66	103.32	0.04319					39	15	3	0	0	0	0.62614	1	11143	11143		41.427	2.1738	1	4824500			59862	10365	39998	40014	67855	67855					0.08867268583026089
TYQAISRVGLR	11	Unmodified	_TYQAISRVGLR_					0	0	0		ENST00000604381.5_1_12:51773598-51785401:-|nuORF;ENST00000543196.6_1_12:51773598-51777285:-|nuORF;ENST00000356317.7_1_12:51773598-51784704:-|nuORF	ENST00000604381.5_1_12:51773598-51785401:-|nuORF	ENST00000604381.5_1_12:51773598-51785401:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.3623657226562	2	632.362036	1262.70952	1.4622	0.00092464	-2.7129	-0.0017155	-1.2507	-0.0007909	632.3600041091405	102.87	1.0018	103.05	102.35	103.36	0.18298					61	24	4	0	0	0	0.60058	1	10854	10854		44.377	6.5657	1	9578200			59863	10365	39998	40014	67856	67856					0.08867268583026089
TYQAISRVGLR	11	Unmodified	_TYQAISRVGLR_					0	0	0		ENST00000604381.5_1_12:51773598-51785401:-|nuORF;ENST00000543196.6_1_12:51773598-51777285:-|nuORF;ENST00000356317.7_1_12:51773598-51784704:-|nuORF	ENST00000604381.5_1_12:51773598-51785401:-|nuORF	ENST00000604381.5_1_12:51773598-51785401:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	632.3630981445312	2	632.362036	1262.70952	1.871	0.0011831	-3.2397	-0.0020487	-1.3688	-0.00086555	632.3597010861852	102.69	0.76917	102.92	102.65	103.42	0.22556					66	24	3	0	0	0	0.60058	1	12480	12480		44.377	4.319	1	27101000			59864	10365	39998	40014	67857	67857					0.08867268583026089
TYQALILKGRS	11	Unmodified	_TYQALILKGRS_					0	0	0		ENST00000586783.5_1_19:14000644-14000983:-|nuORF	ENST00000586783.5_1_19:14000644-14000983:-|nuORF	ENST00000586783.5_1_19:14000644-14000983:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2479248046875	3	417.24695	1248.71902	2.3362	0.00097477	-1.526	-0.0006367	0.81023	0.00033806	417.24614942996294	103.4	0.79668	103.62	103.17	103.96	0.22556					40	19	3	0	0	0	0.74763	1	12585	12585		15.337	0	1	988660			59865	14176	39999	40015	67858	67858					0.10461036868582596
TYQQKVNRRLQ	11	Unmodified	_TYQQKVNRRLQ_					0	0	0		ENSG00000150457|ENST00000382592|LATS2	ENSG00000150457|ENST00000382592|LATS2	ENSG00000150457|ENST00000382592|LATS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.6029052734375	3	478.603908	1432.78989	-0.62309	-0.00029821	-0.09093	-4.3519E-05	-0.71402	-0.00034173	478.60400508239985	15.885	0.2322	15.801	15.708	15.94	-0.083363					18	9	3	0	0	0	0.7896	1	89	89		13.508	0.55046	1	138840			59866	5066	40000	40016	67859	67859					0.09081129906076058
TYRAVVKIV	9	Unmodified	_TYRAVVKIV_					0	0	0		ENSG00000198879|ENST00000397167|SFMBT2	ENSG00000198879|ENST00000397167|SFMBT2	ENSG00000198879|ENST00000397167|SFMBT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8272094726562	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.7932	1	10254	10254		23.042	0	1	15330000			59867	8355	40001	40017	67860	67860					0.12214899127980061
TYRAVVKIV	9	Unmodified	_TYRAVVKIV_					0	0	0		ENSG00000198879|ENST00000397167|SFMBT2	ENSG00000198879|ENST00000397167|SFMBT2	ENSG00000198879|ENST00000397167|SFMBT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8270263671875	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.76255	2	10303	10303;10315		35.618	2.1027	1	23918000			59868	8355	40001	40017	67861;67862	67861					0.12214899127980061
TYRGLPVVL	9	Unmodified	_TYRGLPVVL_					0	0	0			REV__ENSG00000133574|ENST00000255945|GIMAP4	REV__ENSG00000133574|ENST00000255945|GIMAP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.30584716796875	2	509.30821	1016.60187	-1.5847	-0.00080708	-3.0566	-0.0015567	-4.6412	-0.0023638	509.30651405671495	92.924	1.4274	93.116	92.648	94.076	0.19238					107	33	5	0	0	0	0.7932	1	9427	9427		20.947	0.95016	1	2014700	+		59869	19083	40002	40018	67863	67863					0.09422923719614573
TYRILCKRC	9	Unmodified	_TYRILCKRC_					0	0	0		nc|ENSG00000135333|Q15375-2|EPHA7;nc|ENSG00000135333|Q15375-4|EPHA7;ENSG00000135333|ENST00000369303|EPHA7;nc|ENSG00000135333|Q15375-5|EPHA7	nc|ENSG00000135333|Q15375-2|EPHA7	nc|ENSG00000135333|Q15375-2|EPHA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.309814453125	2	578.309903	1154.60525	-1.36	-0.00078649	2.445	0.001414	1.085	0.00062749	578.3111160686906	110.18	1.4068	110.19	109.95	111.35	0.0060425					125	50	3	0	0	0	0.76764	1	11730	11730		34.173	1.3601	1	2534300			59870	4006	40003	40019	67864	67864					0.03413527230327418
TYRLPKCIAI	10	Unmodified	_TYRLPKCIAI_					0	0	0			REV__ENSG00000183269|ENST00000537935|OR52E8	REV__ENSG00000183269|ENST00000537935|OR52E8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3428344726562	2	589.341726	1176.6689	-0.3676	-0.00021664	2.4536	0.001446	2.086	0.0012294	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.86218	1	9427	9427		32.812	4.7309	1	11103000	+		59871	22590	40004	40020	67865	67865					0.08763210939082455
TYRLPKCIAI	10	Unmodified	_TYRLPKCIAI_					0	0	0			REV__ENSG00000183269|ENST00000537935|OR52E8	REV__ENSG00000183269|ENST00000537935|OR52E8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3426513671875	2	589.341726	1176.6689	-0.6745	-0.00039751	2.6065	0.0015361	1.932	0.0011386	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.86718	1	9783	9783		27.882	0	1	16185000	+		59872	22590	40004	40020	67866	67866					0.08763210939082455
TYRLPKCIAI	10	Unmodified	_TYRLPKCIAI_					0	0	0			REV__ENSG00000183269|ENST00000537935|OR52E8	REV__ENSG00000183269|ENST00000537935|OR52E8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3421020507812	2	589.341726	1176.6689	2.2135	0.0013045	-0.53137	-0.00031316	1.6821	0.00099136	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.8608	2	9895	9725;9895		34.173	0.061884	1	5579200	+		59873	22590	40004	40020	67867;67868	67868					0.08763210939082455
TYRLPKCIAI	10	Unmodified	_TYRLPKCIAI_					0	0	0			REV__ENSG00000183269|ENST00000537935|OR52E8	REV__ENSG00000183269|ENST00000537935|OR52E8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.34326171875	2	589.341726	1176.6689	2.472	0.0014569	-0.53238	-0.00031375	1.9396	0.0011431	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.77314	1	10242	10242		40.778	0	1	16740000	+		59874	22590	40004	40020	67869	67869					0.08763210939082455
TYRLPKCIAI	10	Unmodified	_TYRLPKCIAI_					0	0	0			REV__ENSG00000183269|ENST00000537935|OR52E8	REV__ENSG00000183269|ENST00000537935|OR52E8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3427734375	2	589.341726	1176.6689	-0.65438	-0.00038565	2.6476	0.0015603	1.9932	0.0011747	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.86218	3	10019	10019;10103;10140		32.812	3.6424	1	16804000	+		59875	22590	40004	40020	67870;67871;67872	67870					0.08763210939082455
TYRLPKCIAI	10	Unmodified	_TYRLPKCIAI_					0	0	0			REV__ENSG00000183269|ENST00000537935|OR52E8	REV__ENSG00000183269|ENST00000537935|OR52E8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3426513671875	2	589.341726	1176.6689	0.80964	0.00047716	0.92916	0.00054759	1.7388	0.0010247	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.86348	2	9238	9238;9443		31.53	1.2121	1	6634500	+		59876	22590	40004	40020	67873;67874	67873					0.08763210939082455
TYRLPKCIAI	10	Unmodified	_TYRLPKCIAI_					0	0	0			REV__ENSG00000183269|ENST00000537935|OR52E8	REV__ENSG00000183269|ENST00000537935|OR52E8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3421630859375	2	589.341726	1176.6689	-1.324	-0.00078029	3.0671	0.0018076	1.7431	0.0010273	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.8651	1	9376	9376		25.574	1.0549	1	5946500	+		59877	22590	40004	40020	67875	67875					0.08763210939082455
TYRLPKCIAI	10	Unmodified	_TYRLPKCIAI_					0	0	0			REV__ENSG00000183269|ENST00000537935|OR52E8	REV__ENSG00000183269|ENST00000537935|OR52E8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.343017578125	2	589.341726	1176.6689	-1.324	-0.0007803	3.288	0.0019378	1.964	0.0011575	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.86218	1	9687	9687		32.812	0.85756	1	17904000	+		59878	22590	40004	40020	67876	67876					0.08763210939082455
TYRLPKCIAI	10	Unmodified	_TYRLPKCIAI_					0	0	0			REV__ENSG00000183269|ENST00000537935|OR52E8	REV__ENSG00000183269|ENST00000537935|OR52E8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3428344726562	2	589.341726	1176.6689	0.82336	0.00048524	1.2532	0.00073856	2.0765	0.0012238	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.8651	1	11309	11309		25.574	0	1	9460500	+		59879	22590	40004	40020	67877	67877					0.08763210939082455
TYRLPKCIAI	10	Unmodified	_TYRLPKCIAI_					0	0	0			REV__ENSG00000183269|ENST00000537935|OR52E8	REV__ENSG00000183269|ENST00000537935|OR52E8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3428344726562	2	589.341726	1176.6689	0.15554	9.1664E-05	1.9962	0.0011764	2.1517	0.0012681	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.8651	3	11264	11264;11432;11529		26.693	1.0549	1	10540000	+		59880	22590	40004	40020	67878;67879;67880	67878					0.08763210939082455
TYRTIIDLTTV	11	Unmodified	_TYRTIIDLTTV_					0	0	0			REV__ENSG00000102910|ENST00000285737|LONP2	REV__ENSG00000102910|ENST00000285737|LONP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5978698730469	3	432.578365	1294.71327	-1.8326	-0.00079272	-2.9611	-0.0012809	-4.7936	-0.0020736	432.5761666922831	106.1	0.39972	106.15	105.9	106.3	0.053757					14	9	2	0	0	0	0.17334	1	11288	11288		21.78	6.4429	1	83633	+		59881	17372	40005	40021	67881	67881					0.07769893566228347
TYSCYYHTPSA	11	Unmodified	_TYSCYYHTPSA_					0	0	0		nc|ENSG00000170909|Q8IYS5-5|OSCAR;nc|ENSG00000170909|Q8IYS5-6|OSCAR;nc|ENSG00000170909|Q8IYS5-2|OSCAR;ENSG00000170909|ENST00000358375|OSCAR;nc|ENSG00000170909|Q8IYS5-3|OSCAR;nc|ENSG00000170909|Q8IYS5-4|OSCAR;nc|ENSG00000170909|Q8IYS5|OSCAR;nc|ENSG00000170909|Q8IYS5-7|OSCAR	nc|ENSG00000170909|Q8IYS5-5|OSCAR	nc|ENSG00000170909|Q8IYS5-5|OSCAR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	646.7636108398438	2	646.766245	1291.51794	1.833	0.0011855	-1.8575	-0.0012014	-0.024525	-1.5862E-05	646.7648108796553	22.453	0.6923	21.842	21.516	22.209	-0.6107					35	16	3	0	0	0	0.72918	1	942	942		26.693	1.5669	1	376740			59882	15090	40006	40022	67882	67882					-0.11616020230258073
TYSFRKITPKL	11	Unmodified	_TYSFRKITPKL_					0	0	0		nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;ENSG00000253537|ENST00000518325|PCDHGA7	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.93255615234375	3	451.934484	1352.78162	-0.99129	-0.000448	-2.9992	-0.0013554	-3.9905	-0.0018034	451.9330862164875	100.92	2.2384	100.92	100.04	102.28	0					149	53	4	0	0	0	0.75121	1	10246	10246		21.78	1.75	1	534780			59883	8861	40007	40023	67883	67883					0.1193418293673858
TYSFRKITPKL	11	Unmodified	_TYSFRKITPKL_					0	0	0		nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;ENSG00000253537|ENST00000518325|PCDHGA7	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.93292236328125	3	451.934484	1352.78162	-1.7713	-0.0008005	-2.1778	-0.00098423	-3.9491	-0.0017847	451.93340802352935	100.57	2.3737	100.74	99.884	102.26	0.17199					164	56	4	0	0	0	0.71803	1	10521	10521		28.577	7.5445	1	618930			59884	8861	40007	40023	67884	67884					0.1193418293673858
TYSGIPIIVAN	11	Unmodified	_TYSGIPIIVAN_					0	0	0		ENSG00000137198|ENST00000259727|GMPR	ENSG00000137198|ENST00000259727|GMPR	ENSG00000137198|ENST00000259727|GMPR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3197631835938	2	574.321514	1146.62847	-0.44784	-0.0002572	-2.9941	-0.0017196	-3.4419	-0.0019768	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.65746	1	9355	9355		37.812	2.6595	1	1099700			59885	4178	40008	40024	67885	67885					0.061025678202895506
TYSSVTYL	8	Unmodified	_TYSSVTYL_					0	0	0			REV__ENSG00000034971|ENST00000037502|MYOC	REV__ENSG00000034971|ENST00000037502|MYOC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.2326965332031	2	467.231833	932.449113	-1.043	-0.00048731	4.4061	0.0020587	3.3631	0.0015713	467.23370254393717	68.31	1.3377	68.343	68.023	69.361	0.033005					128	53	3	0	0	0	0.89457	1	6583	6583		37.028	8.7742	1	1288900	+		59886	16285	40009	40025	67886	67886					-0.019813164676747874
TYSTVVIL	8	Unmodified	_TYSTVVIL_					0	0	0			REV__ENSG00000164543|ENST00000319357|STK17A	REV__ENSG00000164543|ENST00000319357|STK17A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.2586975097656	2	448.260394	894.506234	-0.14446	-6.4758E-05	-2.7736	-0.0012433	-2.9181	-0.0013081	448.2590229245312	90.101	3.0472	90.17	88.225	91.272	0.068695					215	72	5	0	0	0	0.86791	1	9263	9263		28.254	0	1	2722700	+		59887	21090	40010	40026	67887	67887					0.05476150808715374
TYTHAMHTGT	10	Unmodified	_TYTHAMHTGT_					0	0	0			REV__ENST00000434570.6_1_22:20052429-20053083:+|nuORF	REV__ENST00000434570.6_1_22:20052429-20053083:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3401489257812	2	560.248023	1118.48149	1.3822	0.00077439	-3.0653	-0.0017174	-1.6831	-0.00094296	560.2466392742137	102.06	0.1676	102.11	101.97	102.14	0.043671					5	3	2	0	0	0	0.37624	1	11012	11012		74.255	28.283	1	85912	+		59888	26667	40011	40027	67888	67888					-0.07300852336311436
TYTHAMHTGT	10	Unmodified	_TYTHAMHTGT_					0	0	0			REV__ENST00000434570.6_1_22:20052429-20053083:+|nuORF	REV__ENST00000434570.6_1_22:20052429-20053083:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3401489257812	2	560.248023	1118.48149	0.39233	0.0002198	-3.1	-0.0017368	-2.7077	-0.001517	560.24682924812	102.03	0.54834	102.22	101.97	102.52	0.19484					18	13	2	0	0	0	0.37624	1	10758	10758		66.429	55.564	1	165660	+		59889	26667	40011	40027	67889	67889					-0.07300852336311436
TYTPPYILAVN	11	Unmodified	_TYTPPYILAVN_					0	0	0		ENST00000340979.10_1_1:159024760-159024901:+|nuORF	ENST00000340979.10_1_1:159024760-159024901:+|nuORF	ENST00000340979.10_1_1:159024760-159024901:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3797607421875	2	626.334621	1250.65469	0.92565	0.00057977	3.2221	0.0020181	4.1477	0.0025979	626.3366397353113	105.79	0.27621	105.89	105.83	106.11	0.099007					10	6	2	0	0	0	0.17347	1	11296	11296		36.447	8.3653	1	262890			59890	10237	40012	40028	67890	67890					0.03938836991756034
TYTSILCV	8	Unmodified	_TYTSILCV_					0	0	0		ENSG00000173302|ENST00000309926|GPR148	ENSG00000173302|ENST00000309926|GPR148	ENSG00000173302|ENST00000309926|GPR148	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2742614746094	2	450.230779	898.447005	-0.14138	-6.3655E-05	3.0172	0.0013584	2.8758	0.0012948	450.23050158047033	93.286	0.86674	93.355	92.884	93.751	0.06987					27	20	2	0	0	0	0.4196	1	9639	9639		44.531	9.3304	1	117620			59891	6850	40013	40029	67891	67891					-0.006280684771240885
TYVGLTMA	8	Unmodified	_TYVGLTMA_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;ENST00000509621.1_3_5:89989878-90055411:+|nuORF	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.261474609375	2	428.217672	854.42079	2.6406	0.0011307	4.2856	0.0018352	6.9262	0.0029659	428.21948498266835	90.607	0.44023	90.653	90.389	90.83	0.046448					14	10	2	0	0	0	0.4196	1	9366	9366		52.299	9.8247	1	253980			59892	5938	40014	40030	67892	67892					-0.012243376486026136
TYVGLTMA	8	Unmodified	_TYVGLTMA_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;ENST00000509621.1_3_5:89989878-90055411:+|nuORF	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.261474609375	2	428.217672	854.42079	-1.8499	-0.00079216	2.5747	0.0011025	0.72484	0.00031039	428.2185060875781	90.719	0.60185	90.9	90.515	91.117	0.18029					19	14	2	0	0	0	0.4196	1	9033	9033		35.201	0	1	155230			59893	5938	40014	40030	67893	67893					-0.012243376486026136
TYVKRVFVR	9	Unmodified	_TYVKRVFVR_					0	0	0			REV__nc|ENSG00000135472|Q9BWQ8-2|FAIM2	REV__nc|ENSG00000135472|Q9BWQ8-2|FAIM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.356689453125	2	584.353483	1166.69241	-0.075703	-4.4237E-05	4.2763	0.0024988	4.2005	0.0024546	584.3560423589818	92.438	3.1079	92.483	91.102	94.21	0.045448					194	73	3	0	0	0	0.78983	1	9621	9621		27.882	2.3082	1	588330	+		59894	19226	40015	40031	67894	67894					0.11573392767900259
TYVLKGHIA	9	Unmodified	_TYVLKGHIA_					0	0	0		nc|ENSG00000108039|Q9NQW7-2|XPNPEP1;nc|ENSG00000108039|Q9NQW7|XPNPEP1;nc|ENSG00000108039|Q9NQW7-4|XPNPEP1;ENSG00000108039|ENST00000502935|XPNPEP1	nc|ENSG00000108039|Q9NQW7-2|XPNPEP1	nc|ENSG00000108039|Q9NQW7-2|XPNPEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2903137207031	2	501.292559	1000.57057	-0.36653	-0.00018374	-3.8537	-0.0019318	-4.2202	-0.0021156	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.74721	1	8741	8741		37.159	0	1	9903700			59895	2389	40016	40032	67895	67895					0.07030350685511166
TYVLSPIRP	9	Unmodified	_TYVLSPIRP_					0	0	0			REV__ENST00000432854.5_1_7:44100999-44101362:+|nuORF	REV__ENST00000432854.5_1_7:44100999-44101362:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035888671875	2	523.305667	1044.59678	-0.79828	-0.00041774	-3.1608	-0.0016541	-3.9591	-0.0020718	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.76255	1	8920	8920		35.618	5.1146	1	9288900	+		59896	26639	40017	40033	67896	67896					0.07626619856978323
TYVLSPIRP	9	Unmodified	_TYVLSPIRP_					0	0	0			REV__ENST00000432854.5_1_7:44100999-44101362:+|nuORF	REV__ENST00000432854.5_1_7:44100999-44101362:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3035888671875	2	523.305667	1044.59678	-0.041393	-2.1661E-05	-4.0495	-0.0021191	-4.0909	-0.0021408	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.78058	1	8615	8615		30.504	1.3336	1	3850300	+		59897	26639	40017	40033	67897	67897					0.07626619856978323
TYVLSPIRP	9	Unmodified	_TYVLSPIRP_					0	0	0			REV__ENST00000432854.5_1_7:44100999-44101362:+|nuORF	REV__ENST00000432854.5_1_7:44100999-44101362:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.30322265625	2	523.305667	1044.59678	-1.4863	-0.0007778	-2.6443	-0.0013838	-4.1306	-0.0021616	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.78536	1	8584	8584		29.15	2.1022	1	3566700	+		59898	26639	40017	40033	67898	67898					0.07626619856978323
TYVLSVTG	8	Unmodified	_TYVLSVTG_					0	0	0		ENSG00000185821|ENST00000328314|OR6C76	ENSG00000185821|ENST00000328314|OR6C76	ENSG00000185821|ENST00000328314|OR6C76	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22760009765625	2	420.229094	838.443634	-1.3082	-0.00054975	-1.524	-0.00064043	-2.8322	-0.0011902	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.91005	1	7364	7364		42.474	8.9589	1	419890			59899	7744	40018	40034	67899	67899					0.017950047405292935
TYVLSVTG	8	Unmodified	_TYVLSVTG_					0	0	0		ENSG00000185821|ENST00000328314|OR6C76	ENSG00000185821|ENST00000328314|OR6C76	ENSG00000185821|ENST00000328314|OR6C76	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2273254394531	2	420.229094	838.443634	0.089833	3.775E-05	-2.9174	-0.001226	-2.8276	-0.0011882	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.91005	1	8020	8020		42.474	6.8562	1	888480			59900	7744	40018	40034	67900	67900					0.017950047405292935
TYVLSVTG	8	Unmodified	_TYVLSVTG_					0	0	0		ENSG00000185821|ENST00000328314|OR6C76	ENSG00000185821|ENST00000328314|OR6C76	ENSG00000185821|ENST00000328314|OR6C76	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22711181640625	2	420.229094	838.443634	0.53933	0.00022664	-3.4769	-0.0014611	-2.9375	-0.0012344	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.91005	1	7616	7616		42.474	5.3154	1	678130			59901	7744	40018	40034	67901	67901					0.017950047405292935
TYVNGTDA	8	Unmodified	_TYVNGTDA_					0	0	0		ENST00000471733.5_1_3:196807912-197024075:-|nuORF;nc|ENSG00000075711|Q12959-3|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;ENSG00000075711|ENST00000667157|DLG1;nc|ENSG00000075711|Q12959|DLG1;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959-2|DLG1;nc|ENSG00000075711|Q12959-8|DLG1;nc|ENSG00000075711|Q12959-9|DLG1	ENST00000471733.5_1_3:196807912-197024075:-|nuORF	ENST00000471733.5_1_3:196807912-197024075:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.5754089355469	2	420.690333	839.366112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.283	1	47.321	46.821	47.821	0.037731								0	0	0	0.3037	1	3530	3530		18.324	0.95945	1				59902	1342	40019	40035	67902	67902					-0.0599963319566541
TYVNVLQGY	9	Unmodified	_TYVNVLQGY_					0	0	0			REV__nc|ENSG00000130787|O75146-2|HIP1R	REV__nc|ENSG00000130787|O75146-2|HIP1R	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7733154296875	2	528.771657	1055.52876	-0.25811	-0.00013648	0.18005	9.5207E-05	-0.078057	-4.1274E-05	528.7715912053746	59.627	1.7456	60.18	58.757	60.502	0.55323					93	43	3	0	0	0	0.67345	1	6331	6331		42.396	3.59	1	1063600	+		59903	18910	40020	40036	67903	67903					0.003217502063534994
TYVQPRRK	8	Unmodified	_TYVQPRRK_					0	0	0		ENSG00000165934|ENST00000298875|CPSF2	ENSG00000165934|ENST00000298875|CPSF2	ENSG00000165934|ENST00000298875|CPSF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.3064575195312	2	524.306532	1046.59851	1.1215	0.000588	-1.0108	-0.00052999	0.11065	5.8014E-05	524.305802994704	18.488	0.42122	18.011	17.796	18.218	-0.47694					17	8	3	0	0	0	0.91977	1	395	395		45.952	8.7928	1	113080			59904	6140	40021	40037	67904	67904					0.07707673665595394
TYVQPRRK	8	Unmodified	_TYVQPRRK_					0	0	0		ENSG00000165934|ENST00000298875|CPSF2	ENSG00000165934|ENST00000298875|CPSF2	ENSG00000165934|ENST00000298875|CPSF2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	524.306532	1046.59851	0.31699	0.0001662	-1.2341	-0.00064704	-0.91709	-0.00048084	524.3054772375884	18.649	0.59331	18.028	17.859	18.452	-0.62141	0.0086977	-0.00018946	NaN	45.952	23	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108100			59905	6140	40021	40037							0.07707673665595394
TYVTHLGG	8	Unmodified	_TYVTHLGG_					0	0	0			REV__nc|ENSG00000276644|Q9UI36-4|DACH1	REV__nc|ENSG00000276644|Q9UI36-4|DACH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	424.2183837890625	2	424.21906	846.423567	2.6374	0.0011188	-3.9582	-0.0016792	-1.3209	-0.00056033	424.21733183456104	101.6	1.8618	101.55	100.84	102.7	-0.049828					92	44	4	0	0	0	0.884	1	11117	11117		33.516	1.5607	1	2292700	+		59906	18710	40022	40038	67905	67905					-0.005787461994145815
TYVVEVLVIA	10	Unmodified	_TYVVEVLVIA_					0	0	0		nc|ENSG00000182652|Q8NH05|OR4Q3;ENSG00000182652|ENST00000642117|OR4Q3	nc|ENSG00000182652|Q8NH05|OR4Q3	nc|ENSG00000182652|Q8NH05|OR4Q3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.3323974609375	2	553.328808	1104.64306	2.7435	0.0015181	3.7877	0.0020958	6.5312	0.0036139	553.3307534896243	96.948	2.2732	96.892	96.37	98.643	-0.056381					158	52	5	0	0	0	0.85934	1	10385	10385		35.618	1.4457	1	4237100			59907	7467	40023	40039	67906	67906					0.09492639968425465
TYVVFIIF	8	Unmodified	_TYVVFIIF_					0	0	0			REV__ENSG00000078295|ENST00000338316|ADCY2	REV__ENSG00000078295|ENST00000338316|ADCY2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2909851074219	2	501.288954	1000.56336	-0.4806	-0.00024092	3.9838	0.001997	3.5032	0.0017561	501.29075662244736	99.197	1.8998	99.42	98.833	100.73	0.22262					82	44	3	0	0	0	0.86288	1	10315	10315		26.796	6.7993	1	768070	+		59908	16762	40024	40040	67907	67907					0.06309618085106194
TYVVKTSTPLL	11	Unmodified	_TYVVKTSTPLL_					0	0	0			REV__ENSG00000148357|ENST00000683500|HMCN2	REV__ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3538818359375	2	611.358096	1220.70164	-0.25906	-0.00015838	-3.0986	-0.0018944	-3.3577	-0.0020528	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.70737	1	9224	9224		30.318	1.1477	1	3360200	+		59909	20112	40025	40041	67908	67908					0.1001169654291516
TYVYVDYSIEP	11	Unmodified	_TYVYVDYSIEP_					0	0	0			REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	REV__nc|ENSG00000150275|Q96QU1-3|PCDH15	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2742004394531	3	450.215093	1347.62345	1.7113	0.00077046	1.6813	0.00075693	3.3926	0.0015274	450.21428889239166	93.16	0.60738	93.099	92.847	93.454	-0.06144					30	14	3	0	0	0	0.1745	1	9904	9904		12.957	0	1	96847	+		59910	20205	40026	40042	67909	67909					-0.03645780833016943
TYWKKLVIKNW	11	Unmodified	_TYWKKLVIKNW_					0	0	0			REV__ENST00000589372.1_1_19:9939013-9939570:+|nuORF	REV__ENST00000589372.1_1_19:9939013-9939570:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.9537353515625	3	493.622128	1477.84456	-1.8007	-0.00088885	-0.44364	-0.00021899	-2.2443	-0.0011078	493.6218802691259	31.167	0.9176	31.167	30.72	31.638	0					75	31	3	0	0	0	0.74771	1	1499	1499		22.562	9.6041	1	50794	+		59911	23313	40027	40043	67910	67910					0.12474748724775964
TYWPLWYIEL	10	Unmodified	_TYWPLWYIEL_					0	0	0		nc|ENSG00000146842|Q96SK2-3|TMEM209;nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-4|TMEM209	nc|ENSG00000146842|Q96SK2-3|TMEM209	nc|ENSG00000146842|Q96SK2-3|TMEM209	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	461.9482727050781	3	461.904301	1382.69108	-1.0619	-0.00049048	-2.9376	-0.0013569	-3.9994	-0.0018474	461.90405509929417	107.54	0.28949	107.68	107.48	107.77	0.13866					12	6	2	0	0	0	0.37624	1	11568	11568		27.047	1.1556	1	95032			59912	4864	40028	40044	67911	67911					0.015037138884736123
TYYGSFVTR	9	Unmodified	_TYYGSFVTR_					0	0	0		ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF;chr8:116658980-116689069|59|47.53|0.93|5.67|-|ENST00000522453|EIF3H,EIF3H;ENSG00000147677|ENST00000521861|EIF3H	ENST00000517974.1_1_8:117671049-117768052:-|nuORF	ENST00000517974.1_1_8:117671049-117768052:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	547.2689208984375	2	547.269281	1092.52401	-0.30981	-0.00016955	0.11047	6.0458E-05	-0.19934	-0.00010909	547.2692062519413	50.27	1.7686	50.267	49.757	51.526	-0.0023804					114	48	5	0	0	0	2.2779E-13	7	4257	4218;4225;4234;4245;4257;4269;4281		168.26	91.484	1	2317400			59913	510	40029	40045	67912;67913;67914;67915;67916;67917;67918	67916					-0.018551339364421437
TYYGSFVTR	9	Unmodified	_TYYGSFVTR_					0	0	0		ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF;chr8:116658980-116689069|59|47.53|0.93|5.67|-|ENST00000522453|EIF3H,EIF3H;ENSG00000147677|ENST00000521861|EIF3H	ENST00000517974.1_1_8:117671049-117768052:-|nuORF	ENST00000517974.1_1_8:117671049-117768052:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.2689819335938	2	547.269281	1092.52401	0.0070957	3.8832E-06	-0.3264	-0.00017863	-0.31931	-0.00017475	547.2689576624413	50.254	1.7099	50.231	49.856	51.566	-0.02343					106	46	5	0	0	0	1.5045E-20	7	4350	4318;4327;4338;4350;4363;4375;4399		181.41	101.96	1	2856300			59914	510	40029	40045	67919;67920;67921;67922;67923;67924;67925	67922					-0.018551339364421437
TYYGSFVTR	9	Unmodified	_TYYGSFVTR_					0	0	0		ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF;chr8:116658980-116689069|59|47.53|0.93|5.67|-|ENST00000522453|EIF3H,EIF3H;ENSG00000147677|ENST00000521861|EIF3H	ENST00000517974.1_1_8:117671049-117768052:-|nuORF	ENST00000517974.1_1_8:117671049-117768052:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.2689208984375	2	547.269281	1092.52401	0.36667	0.00020067	-0.56991	-0.00031189	-0.20324	-0.00011122	547.2688551233498	50.299	1.5302	50.303	49.943	51.473	0.0035934					109	42	4	0	0	0	1.0243E-05	7	4287	4263;4275;4287;4299;4311;4323;4336		155.58	86.798	1	2643100			59915	510	40029	40045	67926;67927;67928;67929;67930;67931;67932	67928					-0.018551339364421437
TYYMIDMASS	10	Oxidation (M)	_TYYM(Oxidation (M))IDMASS_		TYYM(0.978)IDM(0.022)ASS		TYYM(16)IDM(-16)ASS	0	0	1			REV__nc|ENSG00000100523|Q8NEL9-3|DDHD1	REV__nc|ENSG00000100523|Q8NEL9-3|DDHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.7481079101562	2	599.243757	1196.47296	0.23512	0.00014089	0.3014	0.00018061	0.53652	0.00032151	599.2437605972377	27.031	0.39463	27.14	27.013	27.408	0.10901					38	17	3	0	0	0	0.46422	1	1058	1058		58.782	17.355	2	142260	+		59916	17200	40030	40046	67933	67933		248			-0.11741587087817607
TYYRFWYPKWE	11	Unmodified	_TYYRFWYPKWE_					0	0	0		nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2;nc|ENSG00000180481|Q4G1C9-6|GLIPR1L2;ENSG00000180481|ENST00000550916|GLIPR1L2	nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2	nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.8399658203125	3	546.92951	1637.7667	1.2641	0.00069137	4.0731	0.0022277	5.3371	0.002919	546.9322286947097	100.83	0.32249	100.88	100.69	101.02	0.046356					10	7	2	0	0	0	0.18353	1	10840	10840		8.4073	2.7085	1	75835			59917	7331	40031	40047	67934	67934					-0.026673089312453158
TYYRYQSL	8	Unmodified	_TYYRYQSL_					0	0	0			REV__ENST00000553626.5_1_14:88852162-88894100:+|nuORF	REV__ENST00000553626.5_1_14:88852162-88894100:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.268798828125	2	547.269281	1092.52401	0.0070957	3.8832E-06	-0.3264	-0.00017863	-0.31931	-0.00017475	547.2689576624413	50.254	1.7099	50.231	49.856	51.566	-0.02343					106	46	5	0	0	0	0.53378	1	4386	4386		74.255	10.721	1	2856300	+		59918	16326	40032	40048	67935	67935					-0.018551339364194064
TYYTELLRYF	10	Unmodified	_TYYTELLRYF_					0	0	0			REV__chr11:89930297-89931171|23|12.96|0.03|8.86|+|2|TRIM49D2,TRIM49D2|1	REV__chr11:89930297-89931171|23|12.96|0.03|8.86|+|2|TRIM49D2,TRIM49D2|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7926940917969	3	456.899328	1367.67615	-2.1083	-0.0009633	1.9333	0.00088334	-0.175	-7.9958E-05	457.2345185570521	39.933	0.70071	40.301	39.771	40.472	0.36797					21	16	2	0	0	0	0.37624	1	3367	3367		32.751	6.6872	1	246530	+		59919	15509	40033	40049	67936	67936					0.0070222202045897575
TYYYGPDC	8	Unmodified	_TYYYGPDC_					0	0	0			REV__ENSG00000121904|ENST00000373381|CSMD2	REV__ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.1841735839844	2	491.186568	980.358584	-0.67764	-0.00033285	-1.5483	-0.0007605	-2.2259	-0.0010933	491.18572201502644	73.987	0.77419	74.114	73.851	74.625	0.12711					56	31	2	0	0	0	0.91005	1	6824	6824		42.474	7.2737	1	181110	+		59920	18472	40034	40050	67937	67937					-0.13238108787595593
VAAAAVPLI	9	Unmodified	_VAAAAVPLI_					0	0	0		nc|ENSG00000256463|Q9BXA9-3|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3;nc|ENSG00000256463|Q9BXA9-2|SALL3;ENSG00000256463|ENST00000537592|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7666931152344	2	412.765646	823.516739	1.4126	0.00058306	1.8694	0.00077163	3.282	0.0013547	412.7662658707051	42.038	1.4358	42.042	41.461	42.897	0.003418					59	34	2	0	0	0	0.72098	1	3210	3210		39.021	0	1	683700			59921	8897	40035	40051	67938	67938					0.09792178253815109
VAAAESHPL	9	Unmodified	_VAAAESHPL_					0	0	0		ENST00000489392.1_1_9:136216448-136216496:+|nuORF;ENST00000416120.1_1_6:64259201-64259360:-|nuORF	ENST00000489392.1_1_9:136216448-136216496:+|nuORF	ENST00000489392.1_1_9:136216448-136216496:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7375183105469	2	447.737617	893.460681	-1.6918	-0.00075749	1.9358	0.00086674	0.244	0.00010925	447.73831786549874	30.443	1.1502	30.471	30.052	31.202	0.028618					60	25	4	0	0	0	0.099874	3	1987	1976;1987;2000		92.191	25.761	1	871910			59922	11390	40036	40052	67939;67940;67941	67940					0.009689253463307068
VAAAESHPL	9	Unmodified	_VAAAESHPL_					0	0	0		ENST00000489392.1_1_9:136216448-136216496:+|nuORF;ENST00000416120.1_1_6:64259201-64259360:-|nuORF	ENST00000489392.1_1_9:136216448-136216496:+|nuORF	ENST00000489392.1_1_9:136216448-136216496:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.7372741699219	2	447.737617	893.460681	0.18147	8.1251E-05	0.089417	4.0035E-05	0.27089	0.00012129	447.73748323710066	30.567	0.65493	30.571	30.316	30.971	0.0037212					38	14	4	0	0	0	0.036317	3	2023	2011;2023;2038		114.59	29.915	1	758890			59923	11390	40036	40052	67942;67943;67944	67943					0.009689253463307068
VAAAGPILL	9	Unmodified	_VAAAGPILL_					0	0	0		ENST00000301923.13_2_22:40719039-40719303:+|nuORF	ENST00000301923.13_2_22:40719039-40719303:+|nuORF	ENST00000301923.13_2_22:40719039-40719303:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7668762207031	2	412.765646	823.516739	-1.2234	-0.00050499	3.8954	0.0016079	2.6719	0.0011029	412.7673243915212	41.944	1.8566	41.905	41.33	43.186	-0.038223					75	44	2	0	0	0	0.78292	1	3249	3249		29.842	3.0454	1	796850			59924	9812	40037	40053	67945	67945					0.09792178253815109
VAAAGRALR	9	Unmodified	_VAAAGRALR_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1;ENST00000257215.9_1_11:61447927-61487603:+|nuORF	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7745056152344	2	442.774868	883.535184	0.14767	6.5386E-05	0.48962	0.00021679	0.63729	0.00028218	442.77491940875103	21.338	0.48852	20.71	20.494	20.982	-0.62835					25	12	3	0	0	0	0.39977	1	781	781		57.811	0	1	141790			59925	8027	40038	40054	67946	67946					0.08875732948365567
VAAAGRALR	9	Unmodified	_VAAAGRALR_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1;ENST00000257215.9_1_11:61447927-61487603:+|nuORF	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	442.774868	883.535184	0.29797	0.00013193	0.23129	0.00010241	0.52925	0.00023434	442.7748356290564	21.164	0.4752	20.705	20.424	20.9	-0.4591	-0.0023604	-0.0001339	NaN	57.811	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133710			59926	8027	40038	40054							0.08875732948365567
VAAAVAVGAV	10	Unmodified	_VAAAVAVGAV_					0	0	0		ENST00000563328.4_1_16:72822270-72822732:+|nuORF	ENST00000563328.4_1_16:72822270-72822732:+|nuORF	ENST00000563328.4_1_16:72822270-72822732:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.932373046875	2	414.252903	826.491253	0.17532	7.2626E-05	-0.52858	-0.00021897	-0.35326	-0.00014634	414.25260642252874	43.642	0.57443	43.615	43.317	43.891	-0.026768					15	13	2	0	0	0	0.37624	1	3302	3302		44.531	9.3304	1	39220			59927	13867	40039	40055	67947	67947					0.07106703731381003
VAAGHEELP	9	Unmodified	_VAAGHEELP_					0	0	0		ENSG00000080007|ENST00000370336|DDX43;nc|ENSG00000080007|Q9NXZ2-2|DDX43	ENSG00000080007|ENST00000370336|DDX43	ENSG00000080007|ENST00000370336|DDX43	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.73431396484375	2	461.735074	921.455596	0.66231	0.00030581	-0.53789	-0.00024836	0.12442	5.7447E-05	461.73461810636286	32.744	0.63437	32.956	32.636	33.271	0.21168					33	14	3	0	0	0	0.39977	1	2341	2341		57.811	7.7867	1	643540			59928	1432	40040	40056	67948	67948					-0.00827378516294175
VAAGHEELP	9	Unmodified	_VAAGHEELP_					0	0	0		ENSG00000080007|ENST00000370336|DDX43;nc|ENSG00000080007|Q9NXZ2-2|DDX43	ENSG00000080007|ENST00000370336|DDX43	ENSG00000080007|ENST00000370336|DDX43	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	461.735074	921.455596	-0.35716	-0.00016491	0.38479	0.00017767	0.027629	1.2757E-05	461.7350631712058	32.767	0.80841	32.893	32.59	33.398	0.12643	-0.031168	0.00039157	NaN	57.811	32	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	546100			59929	1432	40040	40056							-0.00827378516294175
VAAGRAHSA	9	Unmodified	_VAAGRAHSA_					0	0	0			REV__ENSG00000177352|ENST00000321895|CCDC71	REV__ENSG00000177352|ENST00000321895|CCDC71	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.22747802734375	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.78058	1	7650	7650		30.504	1.3541	1	831720	+		59930	22196	40041	40057	67949	67949					0.015265941262214255
VAAHLTDL	8	Unmodified	_VAAHLTDL_					0	0	0		ENSG00000155761|ENST00000336338|SPAG17	ENSG00000155761|ENST00000336338|SPAG17	ENSG00000155761|ENST00000336338|SPAG17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.5824890136719	2	420.23471	838.454868	0.20537	8.6305E-05	1.9093	0.00080233	2.1146	0.00088864	420.2353246779167	38.107	0.39616	38.428	38.32	38.716	0.32129					15	9	2	0	0	0	0.4196	1	3110	3110		20.482	4.0087	1	71887			59931	5340	40042	40058	67950	67950					0.029178268346640834
VAAHLTDL	8	Unmodified	_VAAHLTDL_					0	0	0		ENSG00000155761|ENST00000336338|SPAG17	ENSG00000155761|ENST00000336338|SPAG17	ENSG00000155761|ENST00000336338|SPAG17	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	420.23471	838.454868	-1.9042	-0.00080022	-1.2967	-0.00054494	-3.201	-0.0013452	420.2336352559419	38.428	0.22173	38.428	38.338	38.559	0	-0.13965	-0.0013135	NaN	26.796	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12415			59932	5340	40042	40058							0.029178268346640834
VAAILQGVYKR	11	Unmodified	_VAAILQGVYKR_					0	0	0		nc|ENSG00000111271|Q6JQN1-3|ACAD10;ENST00000508303.5_1_12:112159488-112186840:+|nuORF;nc|ENSG00000111271|Q6JQN1-2|ACAD10;ENST00000413681.7_1_12:112130513-112186840:+|nuORF;ENSG00000111271|ENST00000313698|ACAD10;nc|ENSG00000111271|Q6JQN1-5|ACAD10	nc|ENSG00000111271|Q6JQN1-3|ACAD10	nc|ENSG00000111271|Q6JQN1-3|ACAD10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.5839538574219	3	406.583674	1216.72919	2.7172	0.0011048	-1.5977	-0.0006496	1.1195	0.00045519	406.5829974892177	112.19	0.62576	112.17	112.07	112.69	-0.025414					23	13	2	0	0	0	0.74405	1	12401	12401		23.378	2.5408	1	1536200			59933	2568	40043	40059	67951	67951					0.1294964459377752
VAAKARDTGI	10	Unmodified	_VAAKARDTGI_					0	0	0		nc|ENSG00000132561|O00339-3|MATN2;nc|ENSG00000132561|O00339-2|MATN2;ENSG00000132561|ENST00000254898|MATN2	nc|ENSG00000132561|O00339-3|MATN2	nc|ENSG00000132561|O00339-3|MATN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.29022216796875	2	501.290548	1000.56654	-0.50311	-0.0002522	0.25574	0.0001282	-0.24737	-0.000124	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.86106	1	8870	8870		33.922	0	1	10459000			59934	3806	40044	40060	67952	67952					0.06628261191792717
VAAKLQGPRL	10	Unmodified	_VAAKLQGPRL_					0	0	0			REV__ENSG00000164309|ENST00000446378|CMYA5	REV__ENSG00000164309|ENST00000446378|CMYA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.8309326171875	2	526.832383	1051.65021	-0.66127	-0.00034838	-1.5533	-0.00081831	-2.2145	-0.0011667	526.8311257898843	97.27	1.0385	97.27	96.767	97.806	0					60	23	4	0	0	0	0.86763	1	9733	9733		26.693	0	1	213530	+		59935	21067	40045	40061	67953	67953					0.12645417359499334
VAAKPQVV	8	Unmodified	_VAAKPQVV_					0	0	0			REV__ENSG00000115840|ENST00000422440|SLC25A12	REV__ENSG00000115840|ENST00000422440|SLC25A12	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2587890625	2	406.255446	810.496338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.725	1	68.861	68.361	69.361	0.13522								0	0	0	0.30004	1	6189	6189		21.702	0	1		+		59936	18155	40046	40062	67954	67954					0.08351007593989834
VAAKPQVV	8	Unmodified	_VAAKPQVV_					0	0	0			REV__ENSG00000115840|ENST00000422440|SLC25A12	REV__ENSG00000115840|ENST00000422440|SLC25A12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2576599121094	2	406.255446	810.496338	0.40708	0.00016538	3.217	0.0013069	3.624	0.0014723	406.25658192543807	64.684	1.5075	64.808	63.9	65.408	0.12397					94	59	2	0	0	0	0.81548	1	5695	5695		20.482	1.1219	1	141770	+		59937	18155	40046	40062	67955	67955					0.08351007593989834
VAALGITPAK	10	Unmodified	_VAALGITPAK_					0	0	0			REV__ENST00000564774.5_1_16:84212549-84214094:-|nuORF	REV__ENST00000564774.5_1_16:84212549-84214094:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.79473876953125	2	470.794935	939.575317	-1.2981	-0.00061112	0.84029	0.0003956	-0.45776	-0.00021551	470.7951790395644	45.812	0.83734	46.707	46.367	47.205	0.89542					51	20	4	0	0	0	0.54701	1	4275	4275		52.937	2.9122	1	6173100	+		59938	17393	40047	40063	67956	67956					0.10311234828270699
VAALHAAF	8	Unmodified	_VAALHAAF_					0	0	0			REV__ENSG00000185215|ENST00000560869|TNFAIP2	REV__ENSG00000185215|ENST00000560869|TNFAIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.2254638671875	2	400.226688	798.438824	0.91161	0.00036485	-3.8425	-0.0015379	-2.9309	-0.001173	400.2250799094815	16.285	0.27367	16.363	16.25	16.524	0.077959					20	11	2	0	0	0	0.91333	1	89	89		43.626	0	1	80212	+		59939	22745	40048	40064	67957	67957					0.031541653884119114
VAAPRPPQ	8	Unmodified	_VAAPRPPQ_					0	0	0		ENST00000398204.8_1_7:87563626-87563767:+|nuORF	ENST00000398204.8_1_7:87563626-87563767:+|nuORF	ENST00000398204.8_1_7:87563626-87563767:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.56658935546875	2	418.24287	834.471186	1.547	0.00064701	-0.83566	-0.00034951	0.71131	0.0002975	418.24245482252144	36.419	0.62316	36.86	36.573	37.197	0.44043					24	14	2	0	0	0	0.4196	1	2855	2855		25.45	0	1	161230			59940	11180	40049	40065	67958	67958					0.04732952791414391
VAAQSRLISTI	11	Unmodified	_VAAQSRLISTI_					0	0	0			REV__ENSG00000162994|ENST00000401408|CLHC1	REV__ENSG00000162994|ENST00000401408|CLHC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.8445434570312	2	579.845687	1157.67682	-0.90191	-0.00052297	-1.7617	-0.0010215	-2.6636	-0.0015445	579.8446027793001	102.43	1.6108	102.45	102.08	103.69	0.01989					83	39	4	0	0	0	0.732	1	11019	11019		26.063	0.48933	1	1265800	+		59941	20870	40050	40066	67959	67959					0.10429061460172306
VAAREPIAR	9	Unmodified	_VAAREPIAR_					0	0	0			REV__ENST00000334221.4_1_12:49730639-49730723:-|nuORF	REV__ENST00000334221.4_1_12:49730639-49730723:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.29876708984375	2	491.793258	981.571963	0.13478	6.6286E-05	4.4765	0.0022015	4.6113	0.0022678	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.77244	1	5477	5477		32.812	2.3088	1	176030	+		59942	25154	40051	40067	67960	67960					0.08043984774269575
VAARKLFAP	9	Unmodified	_VAARKLFAP_					0	0	0		ENSG00000167900|ENST00000301634|TK1	ENSG00000167900|ENST00000301634|TK1	ENSG00000167900|ENST00000301634|TK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.7608947753906	2	486.803094	971.591636	0.045836	2.2313E-05	0.33887	0.00016496	0.3847	0.00018727	486.8030368769052	37.759	0.18853	38.072	37.903	38.091	0.31312					6	4	2	0	0	0	0.20789	1	3046	3046		50.025	4.0726	1	43643			59943	6338	40052	40068	67961	67961					0.10470360785029698
VAARKPKP	8	Unmodified	_VAARKPKP_					0	0	0			REV__ENST00000504562.1_1_5:40832608-40835123:-|nuORF	REV__ENST00000504562.1_1_5:40832608-40835123:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	433.7808532714844	2	433.782162	865.549771	-1.7067	-0.00074033	-2.7555	-0.0011953	-4.4622	-0.0019356	433.7819459773158	51.312	5.3307	51.312	50.734	56.065	0					552	155	5	0	0	0	0.81724	1	4633	4633		14.664	0.88877	1	1514200	+		59944	19953	40053	40069	67962	67962					0.11161805096503485
VAARKPKP	8	Unmodified	_VAARKPKP_					0	0	0			REV__ENST00000504562.1_1_5:40832608-40835123:-|nuORF	REV__ENST00000504562.1_1_5:40832608-40835123:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77984619140625	2	433.782162	865.549771	-1.6395	-0.00071121	-2.234	-0.00096906	-3.8735	-0.0016803	433.78196993554945	50.783	3.103	50.812	50.185	53.288	0.029629					306	99	5	0	0	0	0.4196	1	4301	4301		20.482	0	1	3629500	+		59945	19953	40053	40069	67963	67963					0.11161805096503485
VAARKPKP	8	Unmodified	_VAARKPKP_					0	0	0			REV__ENST00000504562.1_1_5:40832608-40835123:-|nuORF	REV__ENST00000504562.1_1_5:40832608-40835123:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77899169921875	2	433.782162	865.549771	0.28843	0.00012512	-3.8544	-0.001672	-3.566	-0.0015469	433.78110763255734	50.946	4.0891	50.995	50.343	54.432	0.049896					422	122	5	0	0	0	0.83058	1	4476	4476		12.959	0	1	4871400	+		59946	19953	40053	40069	67964	67964					0.11161805096503485
VAASAAPLVA	10	Unmodified	_VAASAAPLVA_					0	0	0			REV__ENSG00000110427|ENST00000658780|KIAA1549L	REV__ENSG00000110427|ENST00000658780|KIAA1549L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77984619140625	2	435.258185	868.501818	0.23215	0.00010104	2.841	0.0012366	3.0731	0.0013376	435.2602591262049	44.834	0.21447	44.883	44.821	45.035	0.048996					5	4	2	0	0	0	0.37624	1	3208	3208		30.504	13.139	1	24233	+		59947	17812	40054	40070	67965	67965					0.062306863857997996
VACDPPQKSD	10	Unmodified	_VACDPPQKSD_					0	0	0		ENSG00000169413|ENST00000304677|RNASE6	ENSG00000169413|ENST00000304677|RNASE6	ENSG00000169413|ENST00000304677|RNASE6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.24169921875	2	530.242406	1058.47026	-0.033627	-1.783E-05	-2.5928	-0.0013748	-2.6264	-0.0013926	530.240968765566	111.53	2.3024	111.47	110.12	112.42	-0.059937					158	81	3	0	0	0	0.86047	1	12178	12178		23.523	2.5758	1	182550			59948	6495	40055	40071	67966	67966					-0.05663674430456922
VACKILGF	8	Unmodified	_VACKILGF_					0	0	0			REV__nc|ENSG00000090539|Q9H2X0-5|CHRD	REV__nc|ENSG00000090539|Q9H2X0-5|CHRD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	425.77471923828125	2	425.746399	849.478245	-1.8002	-0.00076644	-2.0046	-0.00085347	-3.8049	-0.0016199	425.7462976395236	39.172	0.61648	39.183	38.882	39.499	0.010708					21	16	2	0	0	0	0.4196	1	2351	2351		28.254	0	1	55505	+		59949	16991	40056	40072	67967	67967					0.0474854934763016
VADGPGRLI	9	Unmodified	_VADGPGRLI_					0	0	0			REV__ENSG00000184922|ENST00000331495|FMNL1	REV__ENSG00000184922|ENST00000331495|FMNL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.26055908203125	2	449.261259	896.507966	0.037787	1.6976E-05	-1.6093	-0.00072298	-1.5715	-0.000706	449.260464463793	72.138	1.197	72.688	72.279	73.476	0.55008					69	28	4	0	0	0	0.7932	1	8116	8116		19.36	0	1	1304500	+		59950	22711	40057	40073	67968	67968					0.05557204617343814
VADLSEIP	8	Unmodified	_VADLSEIP_					0	0	0		nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.22821044921875	2	422.226551	842.438549	-0.34254	-0.00014463	3.7936	0.0016017	3.451	0.0014571	422.22799339483345	56.643	0.55728	56.614	56.308	56.865	-0.02866					41	25	2	0	0	0	0.82464	1	5176	5176		21.702	0	1	776510			59951	4909	40058	40074	67969	67969					0.011027008779137759
VADPPIIL	8	Unmodified	_VADPPIIL_					0	0	0			REV__nc|ENSG00000136156|Q9Y287-2|ITM2B	REV__nc|ENSG00000136156|Q9Y287-2|ITM2B	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.25958251953125	2	419.257654	836.500755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.074	1	69.139	68.639	69.639	0.065506								0	0	0	0.29694	1	6220	6220		37.028	1.8278	1		+		59952	19290	40059	40075	67970	67970					0.0759647201689404
VAEAPRAR	8	Unmodified	_VAEAPRAR_					0	0	0			REV__ENST00000436881.2_1_9:139742359-139742653:+|nuORF	REV__ENST00000436881.2_1_9:139742359-139742653:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2519226074219	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.90465	1	7233	7233		40.573	0	1	2494100	+		59953	26697	40060	40076	67971	67971					0.048394536773685104
VAEARARP	8	Unmodified	_VAEARARP_					0	0	0			REV__ENSG00000031081|ENST00000264245|ARHGAP31	REV__ENSG00000031081|ENST00000264245|ARHGAP31	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516784667969	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.89494	1	7593	7593		37.159	1.5408	1	2823900	+		59954	16275	40061	40077	67972	67972					0.048394536773685104
VAEARARP	8	Unmodified	_VAEARARP_					0	0	0			REV__ENSG00000031081|ENST00000264245|ARHGAP31	REV__ENSG00000031081|ENST00000264245|ARHGAP31	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2517395019531	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87064	1	7655	7655		29.15	1.2673	1	3370400	+		59955	16275	40061	40077	67973	67973					0.048394536773685104
VAEERKRK	8	Unmodified	_VAEERKRK_					0	0	0		nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;ENSG00000070182|ENST00000644917|SPTB	nc|ENSG00000070182|P11277-3|SPTB	nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.3043212890625	2	508.30399	1014.59343	0.58416	0.00029693	-0.97106	-0.00049359	-0.3869	-0.00019666	508.3032296248717	17.498	0.34094	17.015	16.851	17.192	-0.48256					12	7	2	0	0	0	0.89962	1	270	270		38.806	0	1	74746			59956	1234	40062	40078	67974	67974					0.08671369802993922
VAELGVRPG	9	Unmodified	_VAELGVRPG_					0	0	0		nc|ENSG00000162729|Q969P0-2|IGSF8;ENSG00000162729|ENST00000314485|IGSF8	nc|ENSG00000162729|Q969P0-2|IGSF8	nc|ENSG00000162729|Q969P0-2|IGSF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2607727050781	2	449.261259	896.507966	-1.3114	-0.00058915	-0.12706	-5.7085E-05	-1.4384	-0.00064623	449.26102323069586	70.48	0.6918	70.615	70.329	71.021	0.13506					54	33	2	0	0	0	0.58151	1	6383	6383		47.916	3.7988	1	313860			59957	5725	40063	40079	67975	67975					0.05557204617332445
VAELKLNAM	9	Unmodified	_VAELKLNAM_					0	0	0		nc|ENSG00000106052|Q86VP1-3|TAX1BP1;nc|ENSG00000106052|Q86VP1-4|TAX1BP1;nc|ENSG00000106052|Q86VP1-2|TAX1BP1;ENSG00000106052|ENST00000396319|TAX1BP1	nc|ENSG00000106052|Q86VP1-3|TAX1BP1	nc|ENSG00000106052|Q86VP1-3|TAX1BP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7802734375	2	494.778428	987.542302	1.0619	0.0005254	2.8604	0.0014153	3.9223	0.0019407	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.78536	1	8826	8826		29.15	6.1071	1	657500			59958	2278	40064	40080	67976	67976					0.04803284713909761
VAEVLSSLL	9	Unmodified	_VAEVLSSLL_					0	0	0		ENSG00000118246|ENST00000402774|FASTKD2;nc|ENSG00000118246|Q9NYY8-2|FASTKD2;ENST00000487777.5_1_2:207631381-207653673:+|nuORF;ENST00000471788.1_1_2:207651391-207655428:+|nuORF	ENSG00000118246|ENST00000402774|FASTKD2	ENSG00000118246|ENST00000402774|FASTKD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7778015136719	2	465.778951	929.543348	-1.4399	-0.00067067	-1.5585	-0.00072594	-2.9984	-0.0013966	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.77546	1	7530	7530		31.955	0	1	287800			59959	3020	40065	40081	67977	67977					0.07575822354476713
VAFHVAVG	8	Unmodified	_VAFHVAVG_					0	0	0			REV__ENSG00000219607|ENST00000405617|PPP1R3G	REV__ENSG00000219607|ENST00000405617|PPP1R3G	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.2279357910156	2	400.226688	798.438824	1.9396	0.0007763	0.82933	0.00033192	2.769	0.0011082	400.22746720749507	55.46	1.1518	55.491	54.998	56.15	0.030838					66	28	3	0	0	0	0.80127	1	4997	4997		16.705	0	1	652610	+		59960	23703	40066	40082	67978	67978					0.0315416538842328
VAFHVAVG	8	Unmodified	_VAFHVAVG_					0	0	0			REV__ENSG00000219607|ENST00000405617|PPP1R3G	REV__ENSG00000219607|ENST00000405617|PPP1R3G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.22564697265625	2	400.226688	798.438824	-1.9018	-0.00076116	0.025228	1.0097E-05	-1.8766	-0.00075106	400.22655653180504	40.442	1.8386	40.449	40.071	41.91	0.0065041					122	59	3	0	0	0	0.84567	1	2556	2556		24.504	2.8017	1	995180	+		59961	23703	40066	40082	67979	67979					0.0315416538842328
VAFHVAVG	8	Unmodified	_VAFHVAVG_					0	0	0			REV__ENSG00000219607|ENST00000405617|PPP1R3G	REV__ENSG00000219607|ENST00000405617|PPP1R3G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.2282409667969	2	400.226688	798.438824	0.31926	0.00012778	4.1334	0.0016543	4.4527	0.0017821	400.2284187459368	54.769	2.6558	54.861	53.242	55.898	0.091167					119	74	2	0	0	0	0.84567	1	4584	4584		24.504	0	1	1143300	+		59962	23703	40066	40082	67980	67980					0.0315416538842328
VAFHVAVG	8	Unmodified	_VAFHVAVG_					0	0	0			REV__ENSG00000219607|ENST00000405617|PPP1R3G	REV__ENSG00000219607|ENST00000405617|PPP1R3G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.22601318359375	2	400.226688	798.438824	-0.9002	-0.00036028	-1.2479	-0.00049943	-2.1481	-0.00085971	400.22605803281857	41.083	1.6559	41.475	40.867	42.523	0.39209					92	45	3	0	0	0	0.88393	1	3599	3599		33.493	0	1	2260300	+		59963	23703	40066	40082	67981	67981					0.0315416538842328
VAFHVAVG	8	Unmodified	_VAFHVAVG_					0	0	0			REV__ENSG00000219607|ENST00000405617|PPP1R3G	REV__ENSG00000219607|ENST00000405617|PPP1R3G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2274475097656	2	400.226688	798.438824	1.6042	0.00064204	1.2189	0.00048786	2.8231	0.0011299	400.22746352224425	50.179	1.111	50.626	50.02	51.131	0.44761					49	26	3	0	0	0	0.80127	1	4928	4928		16.705	4.4981	1	615680	+		59964	23703	40066	40082	67982	67982					0.0315416538842328
VAFIIKADP	9	Unmodified	_VAFIIKADP_					0	0	0			REV__nc|ENSG00000243710|Q96MR6-2|CFAP57	REV__nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.2850036621094	2	487.289485	972.564418	-1.6564	-0.00080713	0.11683	5.6932E-05	-1.5395	-0.0007502	487.2893914604414	109.16	0.17236	109.16	109.05	109.22	0.0060425					12	7	3	0	0	0	0.49378	1	11654	11654		52.299	9.903	1	1085700	+		59965	23842	40067	40083	67983	67983					0.0770383245398989
VAFIIKADP	9	Unmodified	_VAFIIKADP_					0	0	0			REV__nc|ENSG00000243710|Q96MR6-2|CFAP57	REV__nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	487.289485	972.564418	-0.68498	-0.00033378	-0.49983	-0.00024356	-1.1848	-0.00057735	487.28901068016415	109.12	0.18648	109.24	109.11	109.29	0.12289	0.042014	0.0020288	NaN	52.299	11	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	931170	+		59966	23842	40067	40083							0.0770383245398989
VAFIIKADP	9	Unmodified	_VAFIIKADP_					0	0	0			REV__nc|ENSG00000243710|Q96MR6-2|CFAP57	REV__nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	487.289485	972.564418	-1.6564	-0.00080713	0.11683	5.6932E-05	-1.5395	-0.0007502	487.2893914604414	109.16	0.17236	109.16	109.05	109.22	0.0060425	-0.038162	0.0026298	NaN	52.299	12	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1085700	+		59967	23842	40067	40083							0.0770383245398989
VAFIIKADP	9	Unmodified	_VAFIIKADP_					0	0	0			REV__nc|ENSG00000243710|Q96MR6-2|CFAP57	REV__nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	487.289485	972.564418	1.9157	0.00093348	-3.4215	-0.0016672	-1.5058	-0.00073376	487.28773047236257	109.12	0.22681	109.19	109.04	109.27	0.06794	-0.011287	-0.00081853	NaN	52.299	21	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	688270	+		59968	23842	40067	40083							0.0770383245398989
VAFIWSHSL	9	Unmodified	_VAFIWSHSL_					0	0	0			REV__ENST00000483640.5_1_6:43466739-43470406:+|nuORF	REV__ENST00000483640.5_1_6:43466739-43470406:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.28125	2	530.284734	1058.55492	-1.1085	-0.00058784	-3.8123	-0.0020216	-4.9208	-0.0026094	530.2825683689133	76.473	0.62762	76.562	76.188	76.816	0.089363					43	23	2	0	0	0	0.17071	1	7133	7133		79.939	5.6842	1	105330	+		59969	27495	40068	40084	67984	67984					0.02798064168473502
VAFIWSHSL	9	Unmodified	_VAFIWSHSL_					0	0	0			REV__ENST00000483640.5_1_6:43466739-43470406:+|nuORF	REV__ENST00000483640.5_1_6:43466739-43470406:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	530.284734	1058.55492	-0.94277	-0.00049994	-4.0386	-0.0021416	-4.9814	-0.0026415	530.2823999418666	76.854	0.63409	76.854	76.429	77.063	0	0.24914	0.0011544	NaN	79.939	42	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109900	+		59970	27495	40068	40084							0.02798064168473502
VAFIWSHSL	9	Unmodified	_VAFIWSHSL_					0	0	0			REV__ENST00000483640.5_1_6:43466739-43470406:+|nuORF	REV__ENST00000483640.5_1_6:43466739-43470406:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	530.284734	1058.55492	-1.1085	-0.00058784	-3.8123	-0.0020216	-4.9208	-0.0026094	530.2825683689133	76.473	0.62762	76.562	76.188	76.816	0.089363	-0.042066	0.0013944	NaN	79.939	43	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105330	+		59971	27495	40068	40084							0.02798064168473502
VAFKIRLAK	9	Unmodified	_VAFKIRLAK_					0	0	0		ENST00000553273.5_1_14:35591230-35591449:-|nuORF	ENST00000553273.5_1_14:35591230-35591449:-|nuORF	ENST00000553273.5_1_14:35591230-35591449:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.303466796875	2	523.347669	1044.68079	1.6583	0.00086785	2.8956	0.0015154	4.5539	0.0023833	523.349192623022	88.714	0.15926	88.642	88.554	88.713	-0.07238					6	3	2	0	0	0	0.20789	1	9244	9244		11.511	2.6887	1	32751			59972	13696	40069	40085	67985	67985					0.16023195744537588
VAGEEESS	8	Unmodified	_VAGEEESS_					0	0	0			REV__ENSG00000135315|ENST00000403245|CEP162	REV__ENSG00000135315|ENST00000403245|CEP162	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.17022705078125	2	404.171973	806.329392	-1.5918	-0.00064335	-3.287	-0.0013285	-4.8787	-0.0019719	404.1707810964222	78.405	2.2936	78.5	78.068	80.362	0.0942					180	75	5	0	0	0	0.86288	1	7444	7444		26.796	0	1	6183600	+		59973	19208	40070	40086	67986	67986					-0.0815192981222026
VAGGPFPILR	10	Unmodified	_VAGGPFPILR_					0	0	0			REV__ENSG00000128285|ENST00000249016|MCHR1	REV__ENSG00000128285|ENST00000249016|MCHR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8108520507812	2	513.808377	1025.6022	-0.47161	-0.00024232	1.6041	0.00082419	1.1325	0.00058187	513.8090824468226	48.041	1.56	48.016	47.541	49.101	-0.025112					133	41	4	0	0	0	0.86482	1	3993	3993		25.45	1.2474	1	1552900	+		59974	18767	40071	40087	67987	67987					0.0904234343945518
VAGGTAGTLLI	11	Unmodified	_VAGGTAGTLLI_					0	0	0			REV__ENSG00000164199|ENST00000405460|ADGRV1	REV__ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.7886962890625	2	486.78985	971.565146	-0.010386	-5.056E-06	-0.22893	-0.00011144	-0.23932	-0.0001165	486.78964812550777	52.363	0.8278	53.03	52.715	53.543	0.66729					45	19	3	0	0	0	0.43408	1	5265	5265		56.721	0.28726	1	1913700	+		59975	21051	40072	40088	67988	67988					0.07822627103064406
VAGGVHFL	8	Unmodified	_VAGGVHFL_					0	0	0			REV__chr14:22925040-22927526|44|14.5|0.66|4.46|-|2|PRMT5,PRMT5|1	REV__chr14:22925040-22927526|44|14.5|0.66|4.46|-|2|PRMT5,PRMT5|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2247009277344	2	400.226688	798.438824	-1.6865	-0.00067499	-0.28364	-0.00011352	-1.9702	-0.00078851	400.22648281591756	40.713	1.6274	41.302	40.835	42.462	0.58915					78	45	3	0	0	0	0.80127	1	3515	3515		16.705	0	1	2567400	+		59976	15588	40073	40089	67989	67989					0.0315416538842328
VAGHVSRN	8	Unmodified	_VAGHVSRN_					0	0	0		ENST00000225308.12_1_17:42397045-42397120:-|nuORF	ENST00000225308.12_1_17:42397045-42397120:-|nuORF	ENST00000225308.12_1_17:42397045-42397120:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2274169921875	2	420.227751	838.440949	-1.5729	-0.000661	1.8124	0.00076161	0.23943	0.00010061	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.89494	1	7301	7301		37.159	2.9866	1	634680			59977	9186	40074	40090	67990	67990					0.015265941262327942
VAGILFFF	8	Unmodified	_VAGILFFF_					0	0	0		ENST00000523468.5_1_6:157963626-158049550:+|nuORF;nc|ENSG00000175048|Q8IZN3-2|ZDHHC14;ENSG00000175048|ENST00000359775|ZDHHC14	ENST00000523468.5_1_6:157963626-158049550:+|nuORF	ENST00000523468.5_1_6:157963626-158049550:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2627258300781	2	457.262739	912.510926	-0.11988	-5.4815E-05	3.6161	0.0016535	3.4963	0.0015987	457.26428644836	79.385	2.7838	79.935	78.442	81.226	0.54945					170	65	4	0	0	0	0.88393	1	9068	9068		33.493	1.9632	1	1064700			59978	6984	40075	40091	67991	67991					0.05117079742126407
VAGILVKL	8	Unmodified	_VAGILVKL_					0	0	0			REV__ENSG00000205639|ENST00000338315|MFSD2B	REV__ENSG00000205639|ENST00000338315|MFSD2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7852783203125	2	406.783839	811.553125	0.13384	5.4446E-05	3.7055	0.0015073	3.8393	0.0015618	406.7852062914835	29.439	1.7033	29.41	28.91	30.613	-0.029207					106	38	4	0	0	0	0.81724	1	1826	1826		14.664	0.88877	1	2367100	+		59979	23568	40076	40092	67992	67992					0.13981055150509292
VAGLKLLR	8	Unmodified	_VAGLKLLR_					0	0	0		ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000197136|Q9H6A9-3|PCNX3;ENST00000439247.2_1_11:65394334-65404446:+|nuORF;nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000100731|Q96RV3-3|PCNX1;ENSG00000100731|ENST00000304743|PCNX1	ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000100731|Q96RV3-4|PCNX1	ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.30010986328125	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82419	1	8185	8185		13.775	0	1	5485100			59980	8138;1864	40077	40093	67993	67993					0.14627262273370434
VAGLQRKPRP	10	Unmodified	_VAGLQRKPRP_					0	0	0		nc|ENSG00000172987|Q8WWQ2-4|HPSE2;nc|ENSG00000172987|Q8WWQ2-3|HPSE2;nc|ENSG00000172987|Q8WWQ2-2|HPSE2;ENSG00000172987|ENST00000370552|HPSE2	nc|ENSG00000172987|Q8WWQ2-4|HPSE2	nc|ENSG00000172987|Q8WWQ2-4|HPSE2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	561.3488159179688	2	561.348732	1120.68291	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.043	1	76.133	75.633	76.633	0.089363								0	0	0	0.45132	1	7069	7069		20.947	1.587	1				59981	6814	40078	40094	67994	67994					0.12739624482355794
VAGLSGPLV	9	Unmodified	_VAGLSGPLV_					0	0	0			REV__ENST00000561232.5_1_15:67811374-67814126:-|nuORF	REV__ENST00000561232.5_1_15:67811374-67814126:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.29669189453125	2	406.747453	811.480354	0.80866	0.00032892	2.8238	0.0011486	3.6324	0.0014775	406.7486575214815	37.715	1.7715	37.726	37.33	39.101	0.011173					66	40	2	0	0	0	0.20789	1	2685	2685		24.203	0	1	78406	+		59982	28779	40079	40095	67995	67995					0.06707301357096185
VAGRVKVP	8	Unmodified	_VAGRVKVP_					0	0	0		ENST00000372586.3_1_9:131709657-131709771:-|nuORF	ENST00000372586.3_1_9:131709657-131709771:-|nuORF	ENST00000372586.3_1_9:131709657-131709771:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26678466796875	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.82464	1	2376	2376		21.702	2.3424	1	268720			59983	10707	40080	40096	67996	67996					0.10394116205179671
VAGSICHLL	9	Unmodified	_VAGSICHLL_					0	0	0		ENST00000563197.5_2_16:30016851-30017067:+|nuORF	ENST00000563197.5_2_16:30016851-30017067:+|nuORF	ENST00000563197.5_2_16:30016851-30017067:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3013000488281	2	456.752213	911.489873	-0.096506	-4.4079E-05	3.466	0.0015831	3.3695	0.001539	456.75403452232985	35.73	0.63804	35.718	35.336	35.974	-0.012203					19	13	2	0	0	0	0.20789	1	2250	2250		33.516	9.3128	1	24049			59984	13862	40081	40097	67997	67997					0.030587463709707663
VAGVFARR	8	Unmodified	_VAGVFARR_					0	0	0			REV__ENST00000278071.6_1_10:106073930-106074131:-|nuORF	REV__ENST00000278071.6_1_10:106073930-106074131:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2664489746094	2	438.264136	874.51372	-0.1284	-5.6275E-05	-2.964	-0.001299	-3.0924	-0.0013553	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.86288	1	3086	3086		26.796	2.5934	1	21381000	+		59985	24589	40082	40098	67998	67998					0.07144347919643224
VAGVIPSLVHA	11	Unmodified	_VAGVIPSLVHA_					0	0	0		ENST00000607421.1_1_12:7053547-7053766:-|nuORF	ENST00000607421.1_1_12:7053547-7053766:-|nuORF	ENST00000607421.1_1_12:7053547-7053766:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8170776367188	2	531.818941	1061.62333	-1.264	-0.00067223	-2.5284	-0.0013447	-3.7925	-0.0020169	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.63176	1	10304	10304		40.778	0.20554	1	4586300			59986	14462	40083	40099	67999	67999					0.09498308748334239
VAGVVAVALL	10	Unmodified	_VAGVVAVALL_					0	0	0		ENST00000511044.1_1_5:141242715-141245657:-|nuORF;nc|ENSG00000156453|Q08174|PCDH1;ENSG00000156453|ENST00000287008|PCDH1	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.29937744140625	2	456.299853	910.585153	-1.8518	-0.00084499	3.0889	0.0014095	1.237	0.00056446	456.30111396702245	40.968	1.2974	40.968	40.595	41.892	0					95	40	3	0	0	0	0.86786	1	2722	2722		26.796	0	1	438450			59987	5378	40084	40100	68000	68000					0.1262842283365444
VAGVVAVALL	10	Unmodified	_VAGVVAVALL_					0	0	0		ENST00000511044.1_1_5:141242715-141245657:-|nuORF;nc|ENSG00000156453|Q08174|PCDH1;ENSG00000156453|ENST00000287008|PCDH1	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3001708984375	2	456.299853	910.585153	0.25463	0.00011619	0.99243	0.00045284	1.2471	0.00056903	456.3001402100386	41.308	1.7248	41.277	40.771	42.496	-0.030991					100	44	3	0	0	0	0.86786	1	2996	2996		26.796	2.5934	1	381460			59988	5378	40084	40100	68001	68001					0.1262842283365444
VAGVVAVALL	10	Unmodified	_VAGVVAVALL_					0	0	0		ENST00000511044.1_1_5:141242715-141245657:-|nuORF;nc|ENSG00000156453|Q08174|PCDH1;ENSG00000156453|ENST00000287008|PCDH1	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3000793457031	2	456.299853	910.585153	0.17352	7.9178E-05	1.8885	0.00086173	2.062	0.00094091	456.30054777495894	45.254	1.9566	45.236	44.141	46.098	-0.018585					90	45	3	0	0	0	0.85976	1	3517	3517		35.201	7.3185	1	417410			59989	5378	40084	40100	68002	68002					0.1262842283365444
VAGVVAVALL	10	Unmodified	_VAGVVAVALL_					0	0	0		ENST00000511044.1_1_5:141242715-141245657:-|nuORF;nc|ENSG00000156453|Q08174|PCDH1;ENSG00000156453|ENST00000287008|PCDH1	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30120849609375	2	456.299853	910.585153	0.18552	8.4654E-05	2.8375	0.0012948	3.0231	0.0013794	456.3010022539405	33.29	1.7406	33.257	32.935	34.675	-0.032681					212	75	4	0	0	0	0.86786	1	1678	1678		26.796	0	1	1700700			59990	5378	40084	40100	68003	68003					0.1262842283365444
VAGVVGKGRD	10	Unmodified	_VAGVVGKGRD_					0	0	0			REV__ENST00000573596.1_1_17:7080113-7080528:-|nuORF	REV__ENST00000573596.1_1_17:7080113-7080528:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27752685546875	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.86718	1	8421	8421		27.882	0	1	2070000	+		59991	28963	40085	40101	68004	68004					0.06031992020314192
VAGVVGKGRD	10	Unmodified	_VAGVVGKGRD_					0	0	0			REV__ENST00000573596.1_1_17:7080113-7080528:-|nuORF	REV__ENST00000573596.1_1_17:7080113-7080528:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.27740478515625	2	479.277441	956.540328	0.28639	0.00013726	-0.32449	-0.00015552	-0.038098	-1.826E-05	479.27712266759204	81.87	2.8073	82.296	80.642	83.45	0.42646					178	68	3	0	0	0	0.86589	1	9597	9597		29.15	0	1	1790000	+		59992	28963	40085	40101	68005	68005					0.06031992020314192
VAGVVGKGRD	10	Unmodified	_VAGVVGKGRD_					0	0	0			REV__ENST00000573596.1_1_17:7080113-7080528:-|nuORF	REV__ENST00000573596.1_1_17:7080113-7080528:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.27789306640625	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.86452	1	9929	9929		30.504	1.3336	1	6350300	+		59993	28963	40085	40101	68006	68006					0.06031992020314192
VAGVVKMK	8	Unmodified	_VAGVVKMK_					0	0	0			REV__ENSG00000164296|ENST00000296736|TIGD6	REV__ENSG00000164296|ENST00000296736|TIGD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.2596740722656	2	416.259674	830.504795	0.19222	8.0012E-05	0.66212	0.00027562	0.85434	0.00035563	416.2597428980766	27.393	0.61468	27.217	26.926	27.54	-0.17559					27	13	3	0	0	0	0.93529	1	1580	1580		52.299	9.8247	1	229630	+		59994	21060	40086	40102	68007	68007					0.08276238238966016
VAGVYHKAL	9	Unmodified	_VAGVYHKAL_					0	0	0		ENSG00000129467|ENST00000418030|ADCY4;ENST00000554674.1_1_14:24799917-24801775:-|nuORF	ENSG00000129467|ENST00000418030|ADCY4	ENSG00000129467|ENST00000418030|ADCY4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.277587890625	2	479.279452	956.544351	-1.4767	-0.00070776	-2.9072	-0.0013934	-4.3839	-0.0021011	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.77546	1	7879	7879		31.955	1.4512	1	1785900			59995	3589	40087	40103	68008	68008					0.0643408151404401
VAGWSTVAR	9	Unmodified	_VAGWSTVAR_					0	0	0		chr8:38037874-38057081|16|42.38|0.25|7.43|+|0|TE_info:AluJb,AluJb_dup54816,Alu,SINE,donor,-,38037773,38037874|None,EIF4EBP1|1	chr8:38037874-38057081|16|42.38|0.25|7.43|+|0|TE_info:AluJb,AluJb_dup54816,Alu,SINE,donor,-,38037773,38037874|None,EIF4EBP1|1	chr8:38037874-38057081|16|42.38|0.25|7.43|+|0|TE_info:AluJb,AluJb_dup54816,Alu,SINE,donor,-,38037773,38037874|None,EIF4EBP1|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	473.2575378417969	2	473.758884	945.503215	-0.98753	-0.00046785	2.2572	0.0010694	1.2697	0.00060154	473.75910598986235	45.268	0.62057	45.28	44.899	45.52	0.012058					23	14	2	0	0	0	0.20789	1	3250	3250		21.96	1.013	1	76818			59996	516	40088	40104	68009	68009					0.02828320474566226
VAHVDDMPNAL	11	Oxidation (M)	_VAHVDDM(Oxidation (M))PNAL_		VAHVDDM(1)PNAL		VAHVDDM(82)PNAL	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.28173828125	2	599.282063	1196.54957	-0.13237	-7.9329E-05	-0.52476	-0.00031448	-0.65713	-0.00039381	599.2815921872962	41.911	0.78677	41.88	41.542	42.329	-0.030991					56	18	4	0	0	0	0.15108	3	3087	3087;3099;3111		82.241	32.179	1	1506400			59997	7934	40089	40105	68010;68011;68012	68010		136			-0.04084027476301344
VAHVDDMPNAL	11	Oxidation (M)	_VAHVDDM(Oxidation (M))PNAL_		VAHVDDM(1)PNAL		VAHVDDM(75)PNAL	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.280517578125	2	599.282063	1196.54957	-0.68784	-0.00041221	-0.093739	-5.6176E-05	-0.78158	-0.00046838	599.281871081731	41.809	1.1835	41.771	41.409	42.593	-0.038223					61	28	3	0	0	0	0.28254	3	3177	3152;3165;3177		75.043	22.107	1	1715300			59998	7934	40089	40105	68013;68014;68015	68015		136			-0.04084027476301344
VAHVDDMPNAL	11	Oxidation (M)	_VAHVDDM(Oxidation (M))PNAL_		VAHVDDM(1)PNAL		VAHVDDM(100)PNAL	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.2811889648438	2	599.282063	1196.54957	-2.1965	-0.0013164	1.3416	0.00080399	-0.85496	-0.00051236	599.2827110130493	41.819	1.0357	41.823	41.461	42.497	0.003418					55	24	3	0	0	0	0.053014	4	3122	3085;3110;3122;3134		101.6	32.94	1	1614800			59999	7934	40089	40105	68016;68017;68018;68019	68018		136			-0.04084027476301344
VAHVDDMPNAL	11	Oxidation (M)	_VAHVDDM(Oxidation (M))PNAL_		VAHVDDM(1)PNAL		VAHVDDM(99)PNAL	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.28173828125	2	599.282063	1196.54957	0.86367	0.00051758	-1.236	-0.00074072	-0.37234	-0.00022314	599.2811697198755	41.901	1.0231	41.905	41.501	42.524	0.0043983					72	26	4	0	0	0	0.06978	5	2768	2757;2768;2780;2794;2805		98.582	50.925	1	2426200			60000	7934	40089	40105	68020;68021;68022;68023;68024	68021		136			-0.04084027476301344
VAHVDDMPNAL	11	Oxidation (M)	_VAHVDDM(Oxidation (M))PNAL_		VAHVDDM(1)PNAL		VAHVDDM(91)PNAL	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.2813720703125	2	599.282063	1196.54957	0.36738	0.00022016	-0.86542	-0.00051863	-0.49804	-0.00029846	599.2814398353786	41.758	1.0652	41.831	41.433	42.498	0.073414					72	28	4	0	0	0	0.11202	3	2756	2744;2756;2768		90.601	30.483	1	2283900			60001	7934	40089	40105	68025;68026;68027	68026		136			-0.04084027476301344
VAHVDDMPNAL	11	Oxidation (M)	_VAHVDDM(Oxidation (M))PNAL_		VAHVDDM(1)PNAL		VAHVDDM(99)PNAL	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.2814331054688	2	599.282063	1196.54957	0.35213	0.00021102	-0.76351	-0.00045756	-0.41138	-0.00024653	599.2814597176626	41.781	0.996	41.736	41.358	42.354	-0.045467					57	26	3	0	0	0	0.06978	4	2757	2734;2745;2757;2782		98.582	34.375	1	2305700			60002	7934	40089	40105	68028;68029;68030;68031	68030		136			-0.04084027476301344
VAHVDDMPNAL	11	Oxidation (M)	_VAHVDDM(Oxidation (M))PNAL_		VAHVDDM(1)PNAL		VAHVDDM(86)PNAL	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	599.2811889648438	2	599.282063	1196.54957	-1.8455	-0.001106	0.036381	2.1802E-05	-1.8091	-0.0010842	599.2819451454244	41.266	0.87585	41.668	41.425	42.3	0.40173					68	23	5	0	0	0	0.13035	3	3590	3590;3602;3615		85.862	24.936	1	11846000			60003	7934	40089	40105	68032;68033;68034	68032		136			-0.04084027476301344
VAHVDDMPNAL	11	Oxidation (M)	_VAHVDDM(Oxidation (M))PNAL_		VAHVDDM(1)PNAL		VAHVDDM(83)PNAL	0	0	1		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000487791.1_1_16:226802-227261:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	599.2791748046875	2	599.282063	1196.54957	-1.7404	-0.001043	0.21224	0.00012719	-1.5281	-0.00091578	599.282071651876	41.146	1.0136	41.78	41.532	42.546	0.6339					60	27	4	0	0	0	0.14238	1	3590	3590		82.75	22.632	1	11653000			60004	7934	40089	40105	68035	68035		136			-0.04084027476301344
VAHVLSEY	8	Unmodified	_VAHVLSEY_					0	0	0			REV__ENST00000434185.1_1_22:41195672-41215336:-|nuORF	REV__ENST00000434185.1_1_22:41195672-41215336:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	459.2397155761719	2	459.239993	916.465432	-0.30768	-0.0001413	0.35801	0.00016441	0.05033	2.3114E-05	459.23999743377124	47.433	1.4389	47.345	46.818	48.257	-0.087646					86	43	3	0	0	0	0.92176	1	3552	3552		46.766	0.81448	1	943680	+		60005	17184	40090	40106	68036	68036					0.0038580948910293955
VAIAIIEPVS	10	Unmodified	_VAIAIIEPVS_					0	0	0			REV__ENST00000473504.1_1_9:12707938-12709179:+|nuORF	REV__ENST00000473504.1_1_9:12707938-12709179:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.297607421875	2	506.307875	1010.6012	-0.71236	-0.00036068	2.8135	0.0014245	2.1011	0.0010638	506.3092918145893	49.505	2.3029	49.509	48.577	50.88	0.0035973					80	56	2	0	0	0	0.85694	1	4326	4326		21.96	3.6355	1	177720	+		60006	17648	40091	40107	68037	68037					0.09632084279905939
VAIAKVQI	8	Unmodified	_VAIAKVQI_					0	0	0			REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.27923583984375	2	421.278921	840.543289	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.936	1	62.931	62.431	63.431	-0.0055504								0	0	0	0.30674	1	5848	5848		15.636	0.97212	1		+		60007	16960	40092	40108	68038	68038					0.11663867145136919
VAIAWTPRL	9	Unmodified	_VAIAWTPRL_					0	0	0		ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8076782226562	2	513.808377	1025.6022	0.034734	1.7846E-05	1.2224	0.00062807	1.2571	0.00064592	513.8088839857645	52.229	2.1639	52.227	51.351	53.515	-0.0020447					146	55	4	0	0	0	0.7932	1	4433	4433		21.96	1.013	1	666950			60008	7959	40093	40109	68039	68039					0.0904234343945518
VAIAWTPRL	9	Unmodified	_VAIAWTPRL_					0	0	0		ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8085327148438	2	513.808377	1025.6022	-0.26337	-0.00013532	1.4503	0.00074519	1.187	0.00060987	513.8089696081398	52.202	2.125	52.215	51.482	53.607	0.012436					136	54	4	0	0	0	0.7932	1	4537	4537		21.96	0	1	732880			60009	7959	40093	40109	68040	68040					0.0904234343945518
VAIAWTPRL	9	Unmodified	_VAIAWTPRL_					0	0	0		ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8062133789062	2	513.808377	1025.6022	-0.38547	-0.00019806	1.7192	0.00088333	1.3337	0.00068527	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.7932	1	3802	3802		16.473	2.6978	1	1377600			60010	7959	40093	40109	68041	68041					0.0904234343945518
VAIAWTPRL	9	Unmodified	_VAIAWTPRL_					0	0	0		ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	ENSG00000188778|ENST00000345060|ADRB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.809326171875	2	513.808377	1025.6022	0.49949	0.00025664	0.55072	0.00028296	1.0502	0.00053961	513.8085653001988	50.032	1.4786	50.48	49.777	51.256	0.4476					85	35	3	0	0	0	0.77244	1	4909	4909		32.812	0.85756	1	1418300			60011	7959	40093	40109	68042	68042					0.0904234343945518
VAIDSPYF	8	Unmodified	_VAIDSPYF_					0	0	0			REV__nc|ENSG00000211896|P01857-1|IGHG1	REV__nc|ENSG00000211896|P01857-1|IGHG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3009033203125	2	456.229094	910.443634	-0.059291	-2.705E-05	-4.4473	-0.002029	-4.5066	-0.002056	456.22712757794915	34.87	0.54844	35.08	34.812	35.36	0.21003					25	13	3	0	0	0	0.4196	1	2584	2584		46.766	0	1	249620	+		60012	30192	40094	40110	68043	68043					-0.015169952594760616
VAIEKPLI	8	Unmodified	_VAIEKPLI_					0	0	0			REV__ENSG00000153107|ENST00000341068|ANAPC1	REV__ENSG00000153107|ENST00000341068|ANAPC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78753662109375	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.86288	1	3147	3147		26.796	0	1	448230	+		60013	20330	40095	40111	68044	68044					0.11308733942325944
VAIEKPLI	8	Unmodified	_VAIEKPLI_					0	0	0			REV__ENSG00000153107|ENST00000341068|ANAPC1	REV__ENSG00000153107|ENST00000341068|ANAPC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7881164550781	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.82419	1	3263	3263		13.775	0	1	54520000	+		60014	20330	40095	40111	68045	68045					0.11308733942325944
VAIFGPPNTYY	11	Unmodified	_VAIFGPPNTYY_					0	0	0		ENST00000586788.1_1_19:531880-536341:+|nuORF;ENSG00000099804|ENST00000215574|CDC34	ENST00000586788.1_1_19:531880-536341:+|nuORF	ENST00000586788.1_1_19:531880-536341:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	621.3142700195312	2	621.313689	1240.61282	-0.2911	-0.00018087	0.50684	0.00031491	0.21574	0.00013404	621.3138090299801	68.828	0.73877	68.854	68.562	69.301	0.02636					77	31	4	0	0	0	0.69995	1	6529	6529		31.53	5.9558	1	456890			60015	1766	40096	40112	68046	68046					0.0021428130326057726
VAIGLKHQF	9	Unmodified	_VAIGLKHQF_					0	0	0			REV__nc|ENSG00000135119|Q96EX2-3|RNFT2	REV__nc|ENSG00000135119|Q96EX2-3|RNFT2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.800048828125	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.383	1	53.32	52.82	53.82	-0.062065								0	0	0	0.30053	1	4362	4362		30.504	6.3009	1		+		60016	19194	40097	40113	68047	68047					0.08122056922422871
VAIGTKRIVDH	11	Unmodified	_VAIGTKRIVDH_					0	0	0			REV__nc|ENSG00000290649|Q8NH63|OR51H1	REV__nc|ENSG00000290649|Q8NH63|OR51H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9092102050781	3	403.575178	1207.70371	-1.8261	-0.00073697	0.87736	0.00035408	-0.94874	-0.00038289	403.5754952513638	81.706	0.84529	81.851	81.446	82.291	0.14513					69	19	4	0	0	0	0.70584	1	7788	7788		30.569	1.0181	1	2366000	+		60017	30295	40098	40114	68048	68048					0.10816170071393572
VAIGTKRIVDH	11	Unmodified	_VAIGTKRIVDH_					0	0	0			REV__nc|ENSG00000290649|Q8NH63|OR51H1	REV__nc|ENSG00000290649|Q8NH63|OR51H1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.57476806640625	3	403.575178	1207.70371	0.56211	0.00022685	-1.4705	-0.00059345	-0.90837	-0.00036659	403.57452270455985	81.745	1.4637	81.891	80.868	82.331	0.14551					81	33	4	0	0	0	0.71803	1	7801	7801		28.577	0.49524	1	2051300	+		60018	30295	40098	40114	68049	68049					0.10816170071393572
VAIIARTDL	9	Unmodified	_VAIIARTDL_					0	0	0		nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;ENSG00000106348|ENST00000338791|IMPDH1;ENST00000469328.5_1_7:128033063-128040541:-|nuORF;ENST00000484496.5_1_7:128032984-128040541:-|nuORF;ENSG00000178035|ENST00000326739|IMPDH2	nc|ENSG00000106348|P20839-2|IMPDH1	nc|ENSG00000106348|P20839-2|IMPDH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.298583984375	2	486.297842	970.581131	-0.17178	-8.3536E-05	-0.69763	-0.00033926	-0.86941	-0.00042279	486.2973275652224	52.522	0.53957	53.136	52.95	53.49	0.61436					28	12	3	0	0	0	0.034797	2	5298	5287;5298		115.49	36.043	1	1639700			60019	2292	40099	40115	68050;68051	68051					0.09466333339958055
VAIKEPLV	8	Unmodified	_VAIKEPLV_					0	0	0		ENST00000530070.1_1_19:50188189-50188460:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;ENSG00000126457|ENST00000454376|PRMT1	ENST00000530070.1_1_19:50188189-50188460:+|nuORF	ENST00000530070.1_1_19:50188189-50188460:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7796325683594	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.85277	1	3151	3151		25.45	0	1	2938700			60020	3453	40100	40116	68052	68052					0.10388447425282266
VAIKMIRKPC	10	Unmodified	_VAIKMIRKPC_					0	0	0		ENST00000511942.5_1_4:128802289-128804471:+|nuORF	ENST00000511942.5_1_4:128802289-128804471:+|nuORF	ENST00000511942.5_1_4:128802289-128804471:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	579.843505859375	2	579.846122	1157.67769	0.68543	0.00039744	-4.1829	-0.0024254	-3.4975	-0.002028	579.8435684562951	102.05	1.3312	102.24	101.84	103.17	0.19483					96	32	4	0	0	0	0.85438	1	10718	10718		16.473	0.46637	1	2191200			60021	13027	40101	40117	68053	68053					0.10515861303883867
VAIKVAVL	8	Unmodified	_VAIKVAVL_					0	0	0		ENSG00000163154|ENST00000368910|TNFAIP8L2	ENSG00000163154|ENST00000368910|TNFAIP8L2	ENSG00000163154|ENST00000368910|TNFAIP8L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7854309082031	2	406.783839	811.553125	2.7329	0.0011117	1.0571	0.00043001	3.79	0.0015417	406.7841375125675	29.651	1.9122	29.636	28.895	30.807	-0.015167					147	57	4	0	0	0	0.88915	1	1524	1524		35.201	0	1	914260			60022	5771	40102	40118	68054	68054					0.13981055150509292
VAIKVAVL	8	Unmodified	_VAIKVAVL_					0	0	0		ENSG00000163154|ENST00000368910|TNFAIP8L2	ENSG00000163154|ENST00000368910|TNFAIP8L2	ENSG00000163154|ENST00000368910|TNFAIP8L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78521728515625	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.86791	1	1241	1241		28.254	6.5519	1	1286900			60023	5771	40102	40118	68055	68055					0.13981055150509292
VAIKVAVL	8	Unmodified	_VAIKVAVL_					0	0	0		ENSG00000163154|ENST00000368910|TNFAIP8L2	ENSG00000163154|ENST00000368910|TNFAIP8L2	ENSG00000163154|ENST00000368910|TNFAIP8L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7851257324219	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.86791	1	1694	1694		28.254	6.5519	1	1879900			60024	5771	40102	40118	68056	68056					0.13981055150509292
VAIKVAVL	8	Unmodified	_VAIKVAVL_					0	0	0		ENSG00000163154|ENST00000368910|TNFAIP8L2	ENSG00000163154|ENST00000368910|TNFAIP8L2	ENSG00000163154|ENST00000368910|TNFAIP8L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7845764160156	2	406.783839	811.553125	0.94675	0.00038512	2.7522	0.0011195	3.699	0.0015047	406.78484451151587	33.529	1.369	33.798	33.413	34.781	0.26929					111	32	4	0	0	0	0.82464	1	2536	2536		21.702	0	1	7385300			60025	5771	40102	40118	68057	68057					0.13981055150509292
VAILHYPGVAS	11	Unmodified	_VAILHYPGVAS_					0	0	0		ENSG00000125931|ENST00000651998|CITED1;nc|ENSG00000125931|Q99966-2|CITED1	ENSG00000125931|ENST00000651998|CITED1	ENSG00000125931|ENST00000651998|CITED1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	563.8175659179688	2	563.816399	1125.61824	-1.0471	-0.0005904	2.4801	0.0013983	1.433	0.00080794	563.8176364165028	57.434	0.57993	57.434	57.304	57.884	0					32	22	2	0	0	0	0.68378	1	4937	4937		34.173	3.8548	1	88435			60026	3428	40103	40119	68058	68058					0.060460048857066795
VAILIDVAV	9	Unmodified	_VAILIDVAV_					0	0	0			REV__ENSG00000127324|ENST00000247829|TSPAN8	REV__ENSG00000127324|ENST00000247829|TSPAN8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79278564453125	2	456.791861	911.569169	-1.4626	-0.0006681	4.253	0.0019428	2.7904	0.0012746	456.7937012430135	38.803	1.6993	38.814	37.946	39.646	0.011173					92	39	3	0	0	0	0.7932	1	2720	2720		26.796	0	1	2267400	+		60027	18727	40104	40120	68059	68059					0.10984716596749422
VAILIDVAV	9	Unmodified	_VAILIDVAV_					0	0	0			REV__ENSG00000127324|ENST00000247829|TSPAN8	REV__ENSG00000127324|ENST00000247829|TSPAN8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7933654785156	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.67235	1	2011	2011		42.474	1.9018	1	3484100	+		60028	18727	40104	40120	68060	68060					0.10984716596749422
VAILIGINV	9	Unmodified	_VAILIGINV_					0	0	0			REV__ENST00000540207.1_1_12:131606534-131623805:+|nuORF	REV__ENST00000540207.1_1_12:131606534-131623805:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7931823730469	2	456.299853	910.585153	0.19466	8.8824E-05	2.2755	0.0010383	2.4701	0.0011271	456.3008873746393	37.971	1.3064	38.065	37.618	38.924	0.094322					61	44	2	0	0	0	0.20789	1	2325	2325		17.365	5.1581	1	229110	+		60029	17871	40105	40121	68061	68061					0.1262842283365444
VAILIKVG	8	Unmodified	_VAILIKVG_					0	0	0		ENST00000260803.8_1_3:137893712-137893742:-|nuORF	ENST00000260803.8_1_3:137893712-137893742:-|nuORF	ENST00000260803.8_1_3:137893712-137893742:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852478027344	2	406.783839	811.553125	2.7329	0.0011117	1.0571	0.00043001	3.79	0.0015417	406.7841375125675	29.651	1.9122	29.636	28.895	30.807	-0.015167					147	57	4	0	0	0	0.82464	1	1502	1502		21.702	1.2205	1	914260			60030	9394	40106	40122	68062	68062					0.1398105515052066
VAILSLYS	8	Unmodified	_VAILSLYS_					0	0	0		ENSG00000139209|ENST00000266579|SLC38A4	ENSG00000139209|ENST00000266579|SLC38A4	ENSG00000139209|ENST00000266579|SLC38A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.2540283203125	2	433.255111	864.49567	-1.8301	-0.00079292	0.37153	0.00016097	-1.4586	-0.00063195	433.2555828109104	113.15	0.20975	113.12	113.01	113.22	-0.032326					14	5	3	0	0	0	0.86791	1	12075	12075		28.254	0	1	2295000			60031	4355	40107	40123	68063	68063					0.05800168154280527
VAILTATY	8	Unmodified	_VAILTATY_					0	0	0		ENST00000515517.1_1_5:14741839-14746068:-|nuORF;ENST00000503939.5_1_5:14741448-14751330:-|nuORF;nc|ENSG00000154122|Q9HCJ1-2|ANKH;ENSG00000154122|ENST00000284268|ANKH	ENST00000515517.1_1_5:14741839-14746068:-|nuORF	ENST00000515517.1_1_5:14741839-14746068:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.24603271484375	2	426.247286	850.48002	1.0559	0.00045007	-3.9444	-0.0016813	-2.8885	-0.0012312	426.2455229557475	87.647	3.9379	87.573	85.625	89.563	-0.074005					153	92	2	0	0	0	0.86288	2	9065	9065;9077		26.796	0	1	4306400			60032	5252	40108	40124	68064;68065	68064					0.048798816372254805
VAIMLGRLGP	10	Unmodified	_VAIMLGRLGP_					0	0	0			REV__nc|ENSG00000154025|A0PJK1-5|SLC5A10	REV__nc|ENSG00000154025|A0PJK1-5|SLC5A10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8099365234375	2	513.810062	1025.60557	-0.43911	-0.00022562	-1.7271	-0.0008874	-2.1662	-0.001113	513.8090405966641	49.668	1.7747	49.644	49.058	50.833	-0.024033					129	43	4	0	0	0	0.86201	1	4345	4345		24.203	2.2429	1	1606900	+		60033	29940	40109	40125	68066	68066					0.09379270221847946
VAIMMIGY	8	Unmodified	_VAIMMIGY_					0	0	0		chr1:211103602-211107254|20|14.05|0.73|4.28|-|ENST00000639602|KCNH1,KCNH1;chr1:211019256-211082780|22|15.23|0.6|4.67|-|ENST00000639602|KCNH1,KCNH1;chr1:210920069-211018864|17|12.06|0.37|5.04|-|ENST00000639602|KCNH1,KCNH1	chr1:211103602-211107254|20|14.05|0.73|4.28|-|ENST00000639602|KCNH1,KCNH1	chr1:211103602-211107254|20|14.05|0.73|4.28|-|ENST00000639602|KCNH1,KCNH1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.60919189453125	2	449.232267	896.449982	0.57533	0.00025846	-4.223	-0.0018971	-3.6477	-0.0016387	449.2304041579759	81.059	1.9196	81.202	80.235	82.155	0.14352					98	50	3	0	0	0	0.4196	1	7633	7633		16.705	0	1	80526			60034	38	40110	40126	68067	68067					-0.0023851662396054962
VAINSQQEKR	10	Unmodified	_VAINSQQEKR_					0	0	0			REV__ENSG00000151304|ENST00000339397|SRFBP1	REV__ENSG00000151304|ENST00000339397|SRFBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	586.824462890625	2	586.822744	1171.63093	0.78756	0.00046216	1.4279	0.0008379	2.2154	0.0013001	586.8234697400546	110.07	1.5893	110.19	110.01	111.6	0.12024					137	58	3	0	0	0	0.86348	1	11847	11847		31.53	2.3803	1	6218400	+		60035	20244	40111	40127	68068	68068					0.05198416277949036
VAIPALAPS	9	Unmodified	_VAIPALAPS_					0	0	0		ENST00000444720.1_1_13:21321226-21321529:-|nuORF	ENST00000444720.1_1_13:21321226-21321529:-|nuORF	ENST00000444720.1_1_13:21321226-21321529:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.26043701171875	2	419.755278	837.496004	-0.18907	-7.9365E-05	1.833	0.0007694	1.6439	0.00069004	419.7560072144889	59.428	0.32719	59.414	59.225	59.553	-0.013729					9	8	2	0	0	0	0.7932	1	5451	5451		20.482	1.1219	1	19142			60036	11814	40112	40128	68069	68069					0.07075587874135181
VAIPGVQK	8	Unmodified	_VAIPGVQK_					0	0	0			REV__ENST00000491811.5_1_1:68608485-68620847:-|nuORF	REV__ENST00000491811.5_1_1:68608485-68620847:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2570495605469	2	406.255446	810.496338	0.32239	0.00013097	4.1267	0.0016765	4.4491	0.0018075	406.25699058298386	55.031	2.344	55.122	53.969	56.313	0.091167					99	72	2	0	0	0	0.82464	1	4634	4634		21.702	1.2205	1	315510	+		60037	18219	40113	40129	68070	68070					0.08351007593989834
VAIPIMLI	8	Unmodified	_VAIPIMLI_					0	0	0			REV__nc|ENSG00000112763|Q7KYR7-6|BTN2A1	REV__nc|ENSG00000112763|Q7KYR7-6|BTN2A1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2796630859375	2	435.280075	868.545597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.714	1	66.73	66.23	67.23	0.016205								0	0	0	0.28324	1	6254	6254		54.895	0	1		+		60038	17964	40114	40130	68071	68071					0.10606579558577778
VAIPLAAGL	9	Unmodified	_VAIPLAAGL_					0	0	0		ENST00000495270.1_1_9:130698003-130699012:-|nuORF;ENSG00000136908|ENST00000314392|DPM2	ENST00000495270.1_1_9:130698003-130699012:-|nuORF	ENST00000495270.1_1_9:130698003-130699012:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7669677734375	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.244	1	44.293	43.793	44.793	0.048996								0	0	0	0.30219	1	3108	3108		29.842	0	1				60039	4155	40115	40131	68072	68072					0.09792178253815109
VAIQAVLSL	9	Unmodified	_VAIQAVLSL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000418351.1_1_15:44281927-44282254:-|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000437653.1_1_3:175695849-175696008:-|nuORF;ENST00000507366.1_1_5:79596158-79596224:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2901611328125	2	457.289485	912.564418	-0.28859	-0.00013197	0.4282	0.00019581	0.13962	6.3845E-05	457.2895548922086	87.198	0.87605	87.644	87.265	88.141	0.44629					49	20	4	0	0	0	0.10807	2	10226	10226;10237		90.777	13.283	1	1634500			60040	1338;8080;2370	40116	40132	68073;68074	68073					0.10463832454001931
VAIQAVLSL	9	Unmodified	_VAIQAVLSL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000418351.1_1_15:44281927-44282254:-|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000437653.1_1_3:175695849-175696008:-|nuORF;ENST00000507366.1_1_5:79596158-79596224:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2896728515625	2	457.289485	912.564418	-0.93347	-0.00042687	1.0551	0.00048249	0.12164	5.5625E-05	457.2898110740692	87.286	0.78959	87.74	87.345	88.135	0.45429					45	18	3	0	0	0	0.057432	2	10273	10273;10296		104.75	11.551	1	1900300			60041	1338;8080;2370	40116	40132	68075;68076	68075					0.10463832454001931
VAIQAVLSL	9	Unmodified	_VAIQAVLSL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000418351.1_1_15:44281927-44282254:-|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000437653.1_1_3:175695849-175696008:-|nuORF;ENST00000507366.1_1_5:79596158-79596224:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	457.289485	912.564418	-0.13118	-5.9986E-05	0.57611	0.00026345	0.44494	0.00020347	457.2892381620179	87.646	0.64851	87.713	87.444	88.093	0.067711	0.065308	0.00010911	NaN	104.75	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161610			60042	1338;8080;2370	40116	40132							0.10463832454001931
VAIQAVLSL	9	Unmodified	_VAIQAVLSL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000418351.1_1_15:44281927-44282254:-|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000437653.1_1_3:175695849-175696008:-|nuORF;ENST00000507366.1_1_5:79596158-79596224:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	457.289485	912.564418	1.1041	0.00050491	-1.0317	-0.00047179	0.072427	3.312E-05	457.2888952105948	87.704	0.86655	87.63	87.249	88.115	-0.074005	-0.01822	-0.0013614	NaN	104.75	33	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	242470			60043	1338;8080;2370	40116	40132							0.10463832454001931
VAIQAVLSL	9	Unmodified	_VAIQAVLSL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000418351.1_1_15:44281927-44282254:-|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000437653.1_1_3:175695849-175696008:-|nuORF;ENST00000507366.1_1_5:79596158-79596224:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	457.289485	912.564418	0.75145	0.00034363	-0.87199	-0.00039875	-0.12054	-5.512E-05	457.28894680012456	87.469	0.73566	87.522	87.212	87.948	0.053024	-0.12602	-0.0012153	NaN	104.75	29	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	306530			60044	1338;8080;2370	40116	40132							0.10463832454001931
VAIQAVLSL	9	Unmodified	_VAIQAVLSL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000418351.1_1_15:44281927-44282254:-|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000437653.1_1_3:175695849-175696008:-|nuORF;ENST00000507366.1_1_5:79596158-79596224:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	457.289485	912.564418	-1.1549	-0.00052811	0.9765	0.00044654	-0.17837	-8.1568E-05	457.2898184887803	87.315	0.68848	87.517	87.155	87.843	0.20115	-0.13146	0.00047529	NaN	104.75	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	228600			60045	1338;8080;2370	40116	40132							0.10463832454001931
VAIQAVLSL	9	Unmodified	_VAIQAVLSL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000418351.1_1_15:44281927-44282254:-|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000437653.1_1_3:175695849-175696008:-|nuORF;ENST00000507366.1_1_5:79596158-79596224:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	457.289485	912.564418	0.64122	0.00029322	-0.86458	-0.00039536	-0.22336	-0.00010214	457.2889609318178	87.426	0.77564	87.576	87.338	88.113	0.14956	-0.072289	-0.0012085	NaN	104.75	31	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	286710			60046	1338;8080;2370	40116	40132							0.10463832454001931
VAIQAVLSL	9	Unmodified	_VAIQAVLSL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000428275.1_1_X:53172669-53172729:-|nuORF;ENST00000418351.1_1_15:44281927-44282254:-|nuORF;ENST00000403258.1_1_6:88986231-88986483:-|nuORF;ENST00000437653.1_1_3:175695849-175696008:-|nuORF;ENST00000507366.1_1_5:79596158-79596224:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	457.289485	912.564418	-1.7361	-0.00079389	1.8102	0.00082778	0.074112	3.389E-05	457.29013525289776	87.432	0.82079	87.601	87.22	88.041	0.16922	-0.047223	0.0012378	NaN	104.75	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	304720			60047	1338;8080;2370	40116	40132							0.10463832454001931
VAIQKRAVPGL	11	Unmodified	_VAIQKRAVPGL_					0	0	0		ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-3|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3696899414062	2	576.36659	1150.71863	0.5301	0.00030553	3.5513	0.0020468	4.0814	0.0023524	576.3685738596373	44.83	1.2947	44.843	44.185	45.48	0.012058					69	30	3	0	0	0	0.75921	1	3178	3178		19.997	0	1	296100			60048	6878	40117	40133	68077	68077					0.14929661939368088
VAIQKRAVPGL	11	Unmodified	_VAIQKRAVPGL_					0	0	0		ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-3|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3701171875	2	576.36659	1150.71863	0.53296	0.00030718	4.1039	0.0023653	4.6368	0.0026725	576.3687776976809	46.453	1.6617	46.469	45.398	47.06	0.015514					107	45	3	0	0	0	0.68378	1	3398	3398		34.173	7.4796	1	233880			60049	6878	40117	40133	68078	68078					0.14929661939368088
VAIQKRAVPGL	11	Unmodified	_VAIQKRAVPGL_					0	0	0		ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-3|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3693237304688	2	576.36659	1150.71863	0.34836	0.00020078	3.7961	0.002188	4.1445	0.0023887	576.8702065270611	41.948	1.0228	42.022	41.667	42.689	0.073418					50	27	2	0	0	0	0.72228	1	2795	2795		27.882	0	1	185110			60050	6878	40117	40133	68079	68079					0.14929661939368088
VAIQKRAVPGL	11	Unmodified	_VAIQKRAVPGL_					0	0	0		ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-3|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.369873046875	2	576.36659	1150.71863	0.21884	0.00012613	3.6231	0.0020883	3.842	0.0022144	576.3685004407081	43.385	1.6048	43.335	42.606	44.211	-0.050308					89	39	3	0	0	0	0.7342	1	2963	2963		25.574	0.12388	1	327130			60051	6878	40117	40133	68080	68080					0.14929661939368088
VAIQKRAVPGL	11	Unmodified	_VAIQKRAVPGL_					0	0	0		ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-3|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	ENSG00000173662|ENST00000333172|TAS1R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3696899414062	2	576.36659	1150.71863	0.16825	9.6976E-05	3.9929	0.0023014	4.1612	0.0023984	576.3687345088138	44.787	1.7768	44.718	44.033	45.809	-0.06863					89	43	3	0	0	0	0.75495	1	3208	3208		20.947	0	1	271250			60052	6878	40117	40133	68081	68081					0.14929661939368088
VAIRTKKP	8	Unmodified	_VAIRTKKP_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7930908203125	2	456.803094	911.591636	-0.040593	-1.8543E-05	3.134	0.0014316	3.0934	0.0014131	456.80486772605235	36.658	0.31173	36.64	36.464	36.776	-0.018677					11	6	2	0	0	0	0.4196	1	2367	2367		25.45	8.977	1	28609			60053	2096	40118	40134	68082	68082					0.1323036078503037
VAIRTKKP	8	Unmodified	_VAIRTKKP_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	456.803094	911.591636	-0.83659	-0.00038216	6.7578	0.003087	5.9212	0.0027048	456.80621275482906	36.323	0.71902	36.267	36.017	36.736	-0.055904	-0.033924	-0.00037685	NaN	25.45	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53758			60054	2096	40118	40134							0.1323036078503037
VAIRTKKP	8	Unmodified	_VAIRTKKP_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	456.803094	911.591636	0.17688	8.0799E-05	7.3521	0.0033585	7.529	0.0034393	456.80549103561225	35.998	0.19831	36.101	36.054	36.253	0.10306	-0.19995	0.00016615	NaN	25.45	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63077			60055	2096	40118	40134							0.1323036078503037
VAIRVKAI	8	Unmodified	_VAIRVKAI_					0	0	0		nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;ENSG00000065000|ENST00000643116|AP3D1	nc|ENSG00000065000|O14617-3|AP3D1	nc|ENSG00000065000|O14617-3|AP3D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001403808594	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.86294	1	7630	7630		8.8223	0	1	6323600			60056	14763	40119	40135	68083	68083					0.14627262273359065
VAITEVLVI	9	Unmodified	_VAITEVLVI_					0	0	0			REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20	REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8043212890625	2	478.804968	955.595384	-1.7281	-0.00082743	3.3413	0.0015998	1.6132	0.00077242	478.806439205216	41.295	1.2034	41.295	40.815	42.018	0					75	35	3	0	0	0	0.7932	1	2806	2806		18.324	3.6603	1	280900	+		60057	20978	40120	40136	68084	68084					0.11580985768216578
VAITGNVPN	9	Unmodified	_VAITGNVPN_					0	0	0		ENSG00000132855|ENST00000371129|ANGPTL3	ENSG00000132855|ENST00000371129|ANGPTL3	ENSG00000132855|ENST00000371129|ANGPTL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.74468994140625	2	442.745442	883.476331	-1.2184	-0.00053945	-0.16486	-7.2993E-05	-1.3833	-0.00061244	442.74523759961534	89.283	0.76672	89.754	89.476	90.243	0.47068					54	18	4	0	0	0	0.58668	1	10607	10607		47.657	1.7054	1	4305700			60058	3835	40121	40137	68085	68085					0.029932118633723803
VAITGNVPN	9	Unmodified	_VAITGNVPN_					0	0	0		ENSG00000132855|ENST00000371129|ANGPTL3	ENSG00000132855|ENST00000371129|ANGPTL3	ENSG00000132855|ENST00000371129|ANGPTL3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	442.745442	883.476331	-1.1536	-0.00051077	0.27933	0.00012367	-0.87431	-0.0003871	442.74530610850036	89.945	0.61563	89.945	89.647	90.262	0	0.12422	0.0012057	NaN	47.657	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	112480			60059	3835	40121	40137							0.029932118633723803
VAITGNVPN	9	Unmodified	_VAITGNVPN_					0	0	0		ENSG00000132855|ENST00000371129|ANGPTL3	ENSG00000132855|ENST00000371129|ANGPTL3	ENSG00000132855|ENST00000371129|ANGPTL3	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	442.745442	883.476331	-1.3962	-0.00061815	0.13235	5.8597E-05	-1.2638	-0.00055956	442.74540056601984	89.815	0.93424	90.028	89.692	90.626	0.21271	0.20679	0.0010756	NaN	47.657	56	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	507040			60060	3835	40121	40137							0.029932118633723803
VAIVGITPV	9	Unmodified	_VAIVGITPV_					0	0	0			REV__nc|ENSG00000115525|Q9UNP4-2|ST3GAL5	REV__nc|ENSG00000115525|Q9UNP4-2|ST3GAL5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77996826171875	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.78851	1	2632	2632		28.254	1.4582	1	2793300	+		60061	18127	40122	40138	68086	68086					0.10388447425282266
VAIVGVPIG	9	Unmodified	_VAIVGVPIG_					0	0	0			REV__nc|ENSG00000076555|O00763-3|ACACB	REV__nc|ENSG00000076555|O00763-3|ACACB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7663879394531	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.7932	1	2627	2627		21.702	0	1	795210	+		60062	16727	40123	40139	68087	68087					0.0979217825380374
VAIVGVPIG	9	Unmodified	_VAIVGVPIG_					0	0	0			REV__nc|ENSG00000076555|O00763-3|ACACB	REV__nc|ENSG00000076555|O00763-3|ACACB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.2677307128906	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.78292	1	2686	2686		29.842	4.3914	1	2097300	+		60063	16727	40123	40139	68088	68088					0.0979217825380374
VAIVGVPIG	9	Unmodified	_VAIVGVPIG_					0	0	0			REV__nc|ENSG00000076555|O00763-3|ACACB	REV__nc|ENSG00000076555|O00763-3|ACACB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.26708984375	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.78292	2	2258	2258;2267		29.842	0	1	1619400	+		60064	16727	40123	40139	68089;68090	68089					0.0979217825380374
VAIVLRRLR	9	Unmodified	_VAIVLRRLR_					0	0	0		nc|ENSG00000145041|Q9Y4B6-3|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;ENSG00000145041|ENST00000684031|DCAF1	nc|ENSG00000145041|Q9Y4B6-3|DCAF1	nc|ENSG00000145041|Q9Y4B6-3|DCAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3743896484375	2	548.377292	1094.74003	-0.93575	-0.00051314	-4.429	-0.0024288	-5.3648	-0.0029419	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.7932	1	2527	2527		17.365	0.89182	1	651720			60065	4746	40124	40140	68091	68091					0.19645091758752642
VAIVRFQYRVF	11	Unmodified	_VAIVRFQYRVF_					0	0	0			REV__nc|ENSG00000134121|O00533|CHL1	REV__nc|ENSG00000134121|O00533|CHL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.6080627441406	3	466.60659	1396.79794	-0.9304	-0.00043413	3.8121	0.0017788	2.8818	0.0013446	466.6082212965859	101	2.1787	101	99.472	101.65	0					144	51	4	0	0	0	0.73621	2	10223	10177;10223		25.126	11.618	1	331070	+		60066	19117	40125	40141	68092;68093	68093					0.11541308893492896
VAIVRFQYRVF	11	Unmodified	_VAIVRFQYRVF_					0	0	0			REV__nc|ENSG00000134121|O00533|CHL1	REV__nc|ENSG00000134121|O00533|CHL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.6080017089844	3	466.60659	1396.79794	-0.99183	-0.00046279	4.1431	0.0019332	3.1513	0.0014704	466.6084303998886	100.17	2.2081	100.39	99.16	101.37	0.21511					171	52	4	0	0	0	0.76251	2	10485	10485;10498		19.263	5.1767	1	609920	+		60067	19117	40125	40141	68094;68095	68094					0.11541308893492896
VAIVRFQYRVF	11	Unmodified	_VAIVRFQYRVF_					0	0	0			REV__nc|ENSG00000134121|O00533|CHL1	REV__nc|ENSG00000134121|O00533|CHL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.60784912109375	3	466.60659	1396.79794	0.76537	0.00035713	2.3273	0.0010859	3.0927	0.0014431	466.60758822103855	100.27	2.2686	100.42	99.189	101.46	0.15073					150	53	4	0	0	0	0.732	2	10431	10431;10455		26.063	5.8633	1	578170	+		60068	19117	40125	40141	68096;68097	68096					0.11541308893492896
VAIVRVDP	8	Unmodified	_VAIVRVDP_					0	0	0		ENST00000354332.8_1_1:153517196-153518231:-|nuORF	ENST00000354332.8_1_1:153517196-153518231:-|nuORF	ENST00000354332.8_1_1:153517196-153518231:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7801208496094	2	434.766178	867.517802	-1.9141	-0.0008322	3.61	0.0015695	1.6959	0.00073732	434.765775983909	37.795	0.21365	37.795	37.711	37.925	0					5	4	2	0	0	0	0.4196	1	2294	2294		31.955	0	1	11340			60069	10335	40126	40142	68098	68098					0.07874392622716186
VAKAFMPRGL	10	Unmodified	_VAKAFMPRGL_					0	0	0		ENSG00000185753|ENST00000327877|CXorf38	ENSG00000185753|ENST00000327877|CXorf38	ENSG00000185753|ENST00000327877|CXorf38	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3175048828125	2	545.315512	1088.61647	2.6012	0.0014185	-0.19977	-0.00010894	2.4014	0.0013095	545.3152041315631	102.23	0.80855	102.53	102.13	102.94	0.29864					51	18	4	0	0	0	0.85934	1	12474	12474		35.618	7.736	1	936620			60070	7741	40127	40143	68099	68099					0.07570672596102668
VAKIGRLI	8	Unmodified	_VAKIGRLI_					0	0	0			REV__ENST00000562017.1_1_16:56642884-56643094:+|nuORF	REV__ENST00000562017.1_1_16:56642884-56643094:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3002014160156	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.81724	1	6583	6583		14.664	0	1	1819800	+		60071	28788	40128	40144	68100	68100					0.14627262273359065
VAKLAVKYKIP	11	Unmodified	_VAKLAVKYKIP_					0	0	0		ENSG00000166224|ENST00000373202|SGPL1	ENSG00000166224|ENST00000373202|SGPL1	ENSG00000166224|ENST00000373202|SGPL1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	615.4003295898438	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.853	1	16.853	16.353	17.353	0								0	0	0	0.56276	1	162	162		29.17	12.453	1				60072	6172	40129	40145	68101	68101					0.18548576293073893
VAKLAVKYKIP	11	Unmodified	_VAKLAVKYKIP_					0	0	0		ENSG00000166224|ENST00000373202|SGPL1	ENSG00000166224|ENST00000373202|SGPL1	ENSG00000166224|ENST00000373202|SGPL1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.7205200195312	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.1	1	80.204	79.704	80.704	0.1039								0	0	0	0.56276	1	7578	7578		25.574	2.0514	1				60073	6172	40129	40145	68102	68102					0.18548576293073893
VAKLRTRTLSE	11	Unmodified	_VAKLRTRTLSE_					0	0	0		ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	ENSG00000184160|ENST00000330055|ADRA2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	637.3854370117188	2	637.382968	1272.75138	-0.10456	-6.6643E-05	4.1444	0.0026416	4.0399	0.002575	637.3855814141393	112.54	0.37978	112.48	112.37	112.75	-0.063889					21	12	2	0	0	0	0.79294	1	12234	12234		12.812	0.60486	1	627860			60074	7583	40130	40146	68103	68103					0.1259182427156702
VAKNRKAVGRV	11	Unmodified	_VAKNRKAVGRV_					0	0	0		ENSG00000173545|ENST00000308683|ZNF622	ENSG00000173545|ENST00000308683|ZNF622	ENSG00000173545|ENST00000308683|ZNF622	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.3795166015625	2	599.380563	1196.74657	3.2712	0.0019607	-4.2058	-0.0025209	-0.93465	-0.00056021	599.3778849492661	103.51	3.7036	103.46	103.04	106.74	-0.043755					239	88	5	0	0	0	0.70737	1	11313	11313		30.318	4.7437	1	11967000			60075	6865	40131	40147	68104	68104					0.15606984919440947
VAKRLENHKN	10	Unmodified	_VAKRLENHKN_					0	0	0			REV__ENSG00000124490|ENST00000339139|CRISP2	REV__ENSG00000124490|ENST00000339139|CRISP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.8463745117188	2	604.846553	1207.67855	-0.26186	-0.00015838	-0.35861	-0.0002169	-0.62047	-0.00037529	604.8462755020705	96.346	2.6632	96.346	95.357	98.02	0					132	61	3	0	0	0	0.8651	1	9615	9615		25.574	0	1	263320	+		60076	18588	40132	40148	68105	68105					0.08302115268793386
VAKRSGAH	8	Unmodified	_VAKRSGAH_					0	0	0			REV__ENST00000292408.8_1_5:176513947-176516584:+|nuORF	REV__ENST00000292408.8_1_5:176513947-176516584:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.26617431640625	2	413.238119	824.461684	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.387	1	15.788	15.288	16.288	-0.59873								0	0	0	0.30045	1	125	125		40.573	8.6178	1		+		60077	24677	40133	40149	68106	68106					0.04243184505901354
VAKSVSIRTG	10	Unmodified	_VAKSVSIRTG_					0	0	0			REV__CON__Q9D312	REV__CON__Q9D312	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.3060302734375	2	509.306198	1016.59784	0.74223	0.00037802	-1.438	-0.00073237	-0.69576	-0.00035435	509.305324720209	92.968	1.4156	93.127	92.667	94.082	0.15875					103	33	4	0	0	0	0.86225	1	9407	9407		32.751	6.0576	1	2131200	+	+	60078	16031	40134	40150	68107	68107					0.09020834225907493
VAKVGPQL	8	Unmodified	_VAKVGPQL_					0	0	0			REV__ENSG00000105229|ENST00000262971|PIAS4	REV__ENSG00000105229|ENST00000262971|PIAS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2584533691406	2	406.255446	810.496338	-0.28314	-0.00011503	3.8021	0.0015446	3.5189	0.0014296	406.25686782045995	64.948	2.1458	64.913	63.126	65.272	-0.034798					112	72	2	0	0	0	0.81548	1	6199	6199		20.482	0	1	69933	+		60079	17517	40135	40151	68108	68108					0.08351007594001203
VAKVGPQL	8	Unmodified	_VAKVGPQL_					0	0	0			REV__ENSG00000105229|ENST00000262971|PIAS4	REV__ENSG00000105229|ENST00000262971|PIAS4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.255446	810.496338	1.6084	0.00065342	1.8557	0.0007539	3.4641	0.0014073	406.25611109135446	65.038	1.5494	65.065	63.761	65.311	0.027145	0.171	-0.0014832	NaN	20.482	68	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98018	+		60080	17517	40135	40151							0.08351007594001203
VAKVGPQL	8	Unmodified	_VAKVGPQL_					0	0	0			REV__ENSG00000105229|ENST00000262971|PIAS4	REV__ENSG00000105229|ENST00000262971|PIAS4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.255446	810.496338	-1.8587	-0.00075511	5.2151	0.0021187	3.3564	0.0013636	406.25748346790397	64.514	0.53683	64.639	64.35	64.886	0.12545	-0.25506	0.0012463	NaN	20.482	36	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106020	+		60081	17517	40135	40151							0.08351007594001203
VAKVGPQL	8	Unmodified	_VAKVGPQL_					0	0	0			REV__ENSG00000105229|ENST00000262971|PIAS4	REV__ENSG00000105229|ENST00000262971|PIAS4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	406.255446	810.496338	-1.1079	-0.00045007	4.668	0.0018964	3.5601	0.0014463	406.2573007507166	65.007	1.1301	65.045	64.263	65.393	0.037849	0.15091	0.00080177	NaN	20.482	74	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	152140	+		60082	17517	40135	40151							0.08351007594001203
VALAIPQI	8	Unmodified	_VALAIPQI_					0	0	0			REV__ENST00000514057.1_1_1:569411-569753:+|nuORF	REV__ENST00000514057.1_1_1:569411-569753:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2674865722656	2	412.765646	823.516739	0.29216	0.00012059	0.97906	0.00040412	1.2712	0.00052472	412.7669032783796	51.677	2.3681	51.737	50.932	53.3	0.059719					122	72	2	0	0	0	0.82464	1	4110	4110		21.702	0	1	250130	+		60083	28004	40136	40152	68109	68109					0.09792178253815109
VALALCRV	8	Unmodified	_VALALCRV_					0	0	0		ENST00000487651.5_1_7:100457734-100458115:+|nuORF	ENST00000487651.5_1_7:100457734-100458115:+|nuORF	ENST00000487651.5_1_7:100457734-100458115:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.7560119628906	2	422.757298	843.500044	0.66355	0.00028052	-4.1172	-0.0017406	-3.4537	-0.0014601	422.7554517175375	57.439	1.3239	57.994	57.642	58.966	0.55512					58	32	3	0	0	0	0.86791	1	6003	6003		28.254	1.4582	1	1986200			60084	12605	40137	40153	68110	68110					0.07203354096202474
VALALQRLVRA	11	Unmodified	_VALALQRLVRA_					0	0	0		ENST00000382952.7_2_4:1205816-1205999:-|nuORF	ENST00000382952.7_2_4:1205816-1205999:-|nuORF	ENST00000382952.7_2_4:1205816-1205999:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9288024902344	3	403.931185	1208.77173	-1.975	-0.00079776	-4.1289	-0.0016678	-6.1039	-0.0024656	403.9294096595759	43	1.2076	43.71	43.311	44.519	0.71021					95	29	4	0	0	0	0.75495	1	3871	3871		18.531	0	1	4109900			60085	10979	40138	40154	68111	68111					0.1756903972204782
VALALSVLP	9	Unmodified	_VALALSVLP_					0	0	0		ENSG00000145050|ENST00000528157|MANF	ENSG00000145050|ENST00000528157|MANF	ENSG00000145050|ENST00000528157|MANF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7879943847656	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.7932	1	2673	2673		19.36	0	1	15753000			60086	4747	40139	40155	68112	68112					0.11308733942325944
VALAVAAIP	9	Unmodified	_VALAVAAIP_					0	0	0		nc|ENSG00000074370|Q93084-4|ATP2A3;ENSG00000074370|ENST00000397041|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;ENST00000549840.1_1_12:110765624-110769845:+|nuORF;nc|ENSG00000174437|P16615-5|ATP2A2;nc|ENSG00000174437|P16615-2|ATP2A2;nc|ENSG00000174437|P16615-3|ATP2A2;nc|ENSG00000174437|P16615-4|ATP2A2;ENSG00000174437|ENST00000539276|ATP2A2;nc|ENSG00000196296|O14983-3|ATP2A1;ENSG00000196296|ENST00000395503|ATP2A1;nc|ENSG00000196296|O14983|ATP2A1	nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000174437|P16615-5|ATP2A2;nc|ENSG00000196296|O14983-3|ATP2A1	nc|ENSG00000174437|P16615-5|ATP2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.26751708984375	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.55559	2	2801	2765;2801		49.211	4.6797	1	2097300			60087	6932;1307;8035	40140	40156	68113;68114	68114					0.09792178253792372
VALAVPPAL	9	Unmodified	_VALAVPPAL_					0	0	0		ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENST00000584346.1_1_18:10724726-10725338:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7751770019531	2	425.773471	849.53239	0.348	0.00014817	2.8727	0.0012231	3.2207	0.0013713	425.77466249920843	37.645	1.0176	37.958	37.411	38.429	0.31312					95	25	5	0	0	0	0.78292	2	3087	3061;3087		29.842	0	1	45114000			60088	14133	40141	40157	68115;68116	68116					0.10160464770854105
VALAVPPAL	9	Unmodified	_VALAVPPAL_					0	0	0		ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENST00000584346.1_1_18:10724726-10725338:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	425.773471	849.53239	-1.9118	-0.000814	5.7659	0.002455	3.8541	0.001641	425.77572873523656	37.939	0.81017	37.939	37.527	38.338	0	-0.067425	0.0020307	NaN	29.842	34	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68703			60089	14133	40141	40157							0.10160464770854105
VALAVPPAL	9	Unmodified	_VALAVPPAL_					0	0	0		ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENST00000584346.1_1_18:10724726-10725338:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	425.773471	849.53239	-1.1504	-0.00048982	4.9951	0.0021268	3.8447	0.001637	425.7753822634916	38.243	0.52243	38.193	37.894	38.417	-0.050369	0.18602	0.0013743	NaN	29.842	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61950			60090	14133	40141	40157							0.10160464770854105
VALAVPPAL	9	Unmodified	_VALAVPPAL_					0	0	0		ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENST00000584346.1_1_18:10724726-10725338:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	425.773471	849.53239	0.16764	7.1375E-05	3.5397	0.0015071	3.7073	0.0015785	425.77484668683087	37.91	0.72348	38.004	37.701	38.424	0.094322	-0.0027429	0.00013493	NaN	29.842	42	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57515			60091	14133	40141	40157							0.10160464770854105
VALAVPPAL	9	Unmodified	_VALAVPPAL_					0	0	0		ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENST00000584346.1_1_18:10724726-10725338:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	425.773471	849.53239	-0.082751	-3.5233E-05	3.8321	0.0016316	3.7494	0.0015964	425.77490505073246	37.974	0.67851	37.917	37.695	38.374	-0.057915	-0.090193	0.00038399	NaN	29.842	33	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65713			60092	14133	40141	40157							0.10160464770854105
VALAYGLV	8	Unmodified	_VALAYGLV_					0	0	0		ENSG00000173080|ENST00000368318|RXFP4	ENSG00000173080|ENST00000368318|RXFP4	ENSG00000173080|ENST00000368318|RXFP4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.72406005859375	2	403.244547	804.47454	-1.0931	-0.00044079	2.2269	0.00089797	1.1338	0.00045719	403.2449141393491	64.465	0.54301	64.495	64.233	64.776	0.030243					28	18	2	0	0	0	0.4196	1	5701	5701		43.626	10.133	1	55489			60093	6823	40142	40158	68117	68117					0.0644820284543357
VALDFEQEM	9	Unmodified	_VALDFEQEM_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.1868286132812	2	541.247157	1080.47976	-0.18504	-0.00010015	-0.3042	-0.00016465	-0.48924	-0.0002648	541.2468058551705	76.517	0.54423	76.916	76.532	77.077	0.39969					19	13	2	0	0	0	0.20789	1	8672	8672		90.37	29.398	1	228860			60094	1338;8080;8106	40143	40159	68118	68118					-0.0572590614492583
VALDFEQEM	9	Unmodified	_VALDFEQEM_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	541.247157	1080.47976	-0.4462	-0.00024151	0.52936	0.00028651	0.083151	4.5005E-05	541.2469688339344	76.312	0.53191	76.88	76.599	77.131	0.56836	-0.01811	0.00067623	NaN	90.37	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	345230			60095	1338;8080;8106	40143	40159							-0.0572590614492583
VALDKIPL	8	Unmodified	_VALDKIPL_					0	0	0			REV__nc|ENSG00000122367|O75112-6|LDB3	REV__nc|ENSG00000122367|O75112-6|LDB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.780517578125	2	434.778754	867.542954	-0.097946	-4.2585E-05	2.9953	0.0013023	2.8973	0.0012597	434.7799034741548	53.402	2.1549	53.397	52.578	54.733	-0.0053673					128	65	3	0	0	0	0.81548	1	4620	4620		20.482	0	1	357680	+		60096	18490	40144	40160	68119	68119					0.10388447425293634
VALDKIPL	8	Unmodified	_VALDKIPL_					0	0	0			REV__nc|ENSG00000122367|O75112-6|LDB3	REV__nc|ENSG00000122367|O75112-6|LDB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77996826171875	2	434.778754	867.542954	-0.16786	-7.298E-05	3.2465	0.0014115	3.0786	0.0013385	434.78010256924983	60.312	3.0151	60.298	58.141	61.156	-0.013729					170	93	2	0	0	0	0.884	1	5517	5517		33.516	0	1	231370	+		60097	18490	40144	40160	68120	68120					0.10388447425293634
VALDKIPL	8	Unmodified	_VALDKIPL_					0	0	0			REV__nc|ENSG00000122367|O75112-6|LDB3	REV__nc|ENSG00000122367|O75112-6|LDB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.779541015625	2	434.778754	867.542954	-0.041698	-1.813E-05	2.7567	0.0011986	2.715	0.0011804	434.7799495779998	61.609	1.1389	61.576	61.414	62.553	-0.033173					78	49	2	0	0	0	0.8347	1	5827	5827		23.042	3.6825	1	301770	+		60098	18490	40144	40160	68121	68121					0.10388447425293634
VALDKIPL	8	Unmodified	_VALDKIPL_					0	0	0			REV__nc|ENSG00000122367|O75112-6|LDB3	REV__nc|ENSG00000122367|O75112-6|LDB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7793273925781	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.85277	1	3944	3944		25.45	0	1	1803700	+		60099	18490	40144	40160	68122	68122					0.10388447425293634
VALDKIPL	8	Unmodified	_VALDKIPL_					0	0	0			REV__nc|ENSG00000122367|O75112-6|LDB3	REV__nc|ENSG00000122367|O75112-6|LDB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.78094482421875	2	434.778754	867.542954	0.67011	0.00029135	2.2738	0.00098859	2.9439	0.0012799	434.7797190459747	63.868	2.8603	63.895	62.469	65.329	0.027142					167	106	2	0	0	0	0.884	1	5889	5889		33.516	0	1	173910	+		60100	18490	40144	40160	68123	68123					0.10388447425293634
VALDKIPL	8	Unmodified	_VALDKIPL_					0	0	0			REV__nc|ENSG00000122367|O75112-6|LDB3	REV__nc|ENSG00000122367|O75112-6|LDB3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77972412109375	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.706	1	61.814	61.314	62.314	0.10743								0	0	0	0.30125	1	5364	5364		20.482	0	1		+		60101	18490	40144	40160	68124	68124					0.10388447425293634
VALDKIPL	8	Unmodified	_VALDKIPL_					0	0	0			REV__nc|ENSG00000122367|O75112-6|LDB3	REV__nc|ENSG00000122367|O75112-6|LDB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7778625488281	2	434.778754	867.542954	0.38509	0.00016743	2.4443	0.0010627	2.8294	0.0012301	434.77974914069443	61.654	1.1298	61.773	61.481	62.611	0.11901					111	53	3	0	0	0	0.84341	1	5351	5351		24.203	0	1	353960	+		60102	18490	40144	40160	68125	68125					0.10388447425293634
VALDKIPL	8	Unmodified	_VALDKIPL_					0	0	0			REV__nc|ENSG00000122367|O75112-6|LDB3	REV__nc|ENSG00000122367|O75112-6|LDB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77984619140625	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.884	1	3712	3712		33.516	0	1	2175000	+		60103	18490	40144	40160	68126	68126					0.10388447425293634
VALDKIPL	8	Unmodified	_VALDKIPL_					0	0	0			REV__nc|ENSG00000122367|O75112-6|LDB3	REV__nc|ENSG00000122367|O75112-6|LDB3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7783508300781	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.72	1	61.273	60.773	61.773	0.55323								0	0	0	0.29245	1	6472	6472		30.504	0	1		+		60104	18490	40144	40160	68127	68127					0.10388447425293634
VALDKIPL	8	Unmodified	_VALDKIPL_					0	0	0			REV__nc|ENSG00000122367|O75112-6|LDB3	REV__nc|ENSG00000122367|O75112-6|LDB3	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.5906	-0.00069158	4.7305	0.0020567	3.1399	0.0013652	434.78074302450693	60.003	2.4002	60.003	58.782	61.182	0	-0.14767	0.000662	NaN	33.516	171	104	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	207470	+		60105	18490	40144	40160							0.10388447425293634
VALDKIPL	8	Unmodified	_VALDKIPL_					0	0	0			REV__nc|ENSG00000122367|O75112-6|LDB3	REV__nc|ENSG00000122367|O75112-6|LDB3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	434.778754	867.542954	-0.16786	-7.298E-05	3.2465	0.0014115	3.0786	0.0013385	434.78010256924983	60.312	3.0151	60.298	58.141	61.156	-0.013729	0.14767	-0.00062846	NaN	33.516	170	93	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	231370	+		60106	18490	40144	40160							0.10388447425293634
VALEQRLDRA	10	Unmodified	_VALEQRLDRA_					0	0	0			REV__nc|ENSG00000166579|Q9GZM8-3|NDEL1	REV__nc|ENSG00000166579|Q9GZM8-3|NDEL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.8300170898438	2	585.833111	1169.65167	-0.9232	-0.00054084	-3.7775	-0.002213	-4.7007	-0.0027538	585.8307293050794	57.888	1.4017	57.888	57.479	58.881	0					105	56	3	0	0	0	0.73395	1	5032	5032		42.864	8.9426	1	164040	+		60107	16662	40145	40161	68128	68128					0.07363006657601545
VALEVPPK	8	Unmodified	_VALEVPPK_					0	0	0		chr10:94608026-94609853|57|13.53|0.54|4.65|+|ENST00000371327|HELLS,HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;chr10:94545907-94546377|63|48.13|0.65|6.2|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS	chr10:94608026-94609853|57|13.53|0.54|4.65|+|ENST00000371327|HELLS,HELLS	chr10:94608026-94609853|57|13.53|0.54|4.65|+|ENST00000371327|HELLS,HELLS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.3027648925781	2	426.763104	851.511654	0.35296	0.00015063	2.9701	0.0012675	3.3231	0.0014182	426.7643414950153	64.169	0.92669	64.722	64.299	65.226	0.55386					32	21	2	0	0	0	0.4196	1	6933	6933		27.882	4.8398	1	77217			60108	92	40146	40162	68129	68129					0.07995874391190227
VALFHIRR	8	Unmodified	_VALFHIRR_					0	0	0		ENSG00000111432|ENST00000229030|FZD10	ENSG00000111432|ENST00000229030|FZD10	ENSG00000111432|ENST00000229030|FZD10	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3136901855469	2	506.314161	1010.61377	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.309	1	63.431	62.931	63.931	0.12252								0	0	0	0.30004	1	5547	5547		21.702	2.3424	1				60109	2582	40147	40163	68130	68130					0.10888585253474048
VALGAALALL	10	Unmodified	_VALGAALALL_					0	0	0			REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3013000488281	2	456.299853	910.585153	-0.11111	-5.0701E-05	2.9884	0.0013636	2.8773	0.0013129	456.3010566410468	35.268	1.48	35.256	34.768	36.248	-0.012203					106	34	4	0	0	0	0.85976	1	2250	2250		35.201	0	1	794600	+		60110	17165	40148	40164	68131	68131					0.1262842283365444
VALGAALALL	10	Unmodified	_VALGAALALL_					0	0	0			REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3009338378906	2	456.299853	910.585153	-0.75416	-0.00034412	3.5877	0.0016371	2.8336	0.001293	456.3012900851617	35.065	1.7041	35.071	34.727	36.431	0.0063934					112	39	4	0	0	0	0.86786	1	2288	2288		26.796	0	1	634200	+		60111	17165	40148	40164	68132	68132					0.1262842283365444
VALGAALALL	10	Unmodified	_VALGAALALL_					0	0	0			REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3016662597656	2	456.299853	910.585153	0.16746	7.6412E-05	2.7809	0.0012689	2.9484	0.0013454	456.30098393638264	34.91	1.4474	35.016	34.575	36.022	0.10603					127	53	3	0	0	0	0.85976	1	1854	1854		35.201	0	1	751300	+		60112	17165	40148	40164	68133	68133					0.1262842283365444
VALGAALALL	10	Unmodified	_VALGAALALL_					0	0	0			REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30047607421875	2	456.299853	910.585153	0.20856	9.5165E-05	2.1915	0.00099997	2.4	0.0010951	456.3006822379284	39.411	1.6419	39.499	38.918	40.56	0.088371					97	45	3	0	0	0	0.86786	1	2447	2447		26.796	0	1	525810	+		60113	17165	40148	40164	68134	68134					0.1262842283365444
VALGAALALL	10	Unmodified	_VALGAALALL_					0	0	0			REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30096435546875	2	456.299853	910.585153	0.25824	0.00011784	2.0816	0.00094982	2.3398	0.0010677	456.3006554004226	45.028	1.9814	45.077	44.089	46.07	0.048996					97	49	3	0	0	0	0.86786	1	3233	3233		26.796	0	1	456360	+		60114	17165	40148	40164	68135	68135					0.1262842283365444
VALGAALALL	10	Unmodified	_VALGAALALL_					0	0	0			REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30096435546875	2	456.299853	910.585153	0.12298	5.6116E-05	2.7993	0.0012773	2.9223	0.0013334	456.30098509136985	34.994	1.698	34.939	34.615	36.313	-0.055149					136	59	3	0	0	0	0.85976	1	1806	1806		35.201	0	1	657240	+		60115	17165	40148	40164	68136	68136					0.1262842283365444
VALGAALALL	10	Unmodified	_VALGAALALL_					0	0	0			REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	REV__ENST00000551731.1_1_22:51065464-51066207:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3004455566406	2	456.299853	910.585153	-0.39388	-0.00017973	3.0173	0.0013768	2.6234	0.001197	456.3011476839791	49.644	1.4417	49.55	48.811	50.252	-0.093182					60	34	2	0	0	0	0.86786	1	3821	3821		26.796	7.4361	1	144660	+		60116	17165	40148	40164	68137	68137					0.1262842283365444
VALHSSTVV	9	Unmodified	_VALHSSTVV_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.758056640625	2	456.761092	911.507631	0.14888	6.8004E-05	-0.26008	-0.0001188	-0.1112	-5.0791E-05	456.7610134597719	34.561	0.48896	34.506	34.164	34.653	-0.055149					25	18	2	0	0	0	0.58151	1	1741	1741		47.916	7.343	1	64349	+		60117	20437;29946	40149	40165	68138	68138					0.048337848974938424
VALIIKPD	8	Unmodified	_VALIIKPD_					0	0	0		ENSG00000160145|ENST00000682506|KALRN;nc|ENSG00000160145|O60229|KALRN;nc|ENSG00000160145|O60229-2|KALRN;nc|ENSG00000038382|O75962-5|TRIO;nc|ENSG00000038382|O75962-2|TRIO;ENSG00000038382|ENST00000344204|TRIO;nc|ENSG00000038382|O75962-4|TRIO	ENSG00000160145|ENST00000682506|KALRN;nc|ENSG00000038382|O75962-5|TRIO	nc|ENSG00000038382|O75962-5|TRIO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7797546386719	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.89457	1	3546	3546		37.028	1.8278	1	1294000			60118	14744;5556	40150	40166	68139	68139					0.10388447425282266
VALIIKPD	8	Unmodified	_VALIIKPD_					0	0	0		ENSG00000160145|ENST00000682506|KALRN;nc|ENSG00000160145|O60229|KALRN;nc|ENSG00000160145|O60229-2|KALRN;nc|ENSG00000038382|O75962-5|TRIO;nc|ENSG00000038382|O75962-2|TRIO;ENSG00000038382|ENST00000344204|TRIO;nc|ENSG00000038382|O75962-4|TRIO	ENSG00000160145|ENST00000682506|KALRN;nc|ENSG00000038382|O75962-5|TRIO	nc|ENSG00000038382|O75962-5|TRIO	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801208496094	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.87922	1	2233	2233		31.955	5.1588	1	3951300			60119	14744;5556	40150	40166	68140	68140					0.10388447425282266
VALIIKPD	8	Unmodified	_VALIIKPD_					0	0	0		ENSG00000160145|ENST00000682506|KALRN;nc|ENSG00000160145|O60229|KALRN;nc|ENSG00000160145|O60229-2|KALRN;nc|ENSG00000038382|O75962-5|TRIO;nc|ENSG00000038382|O75962-2|TRIO;ENSG00000038382|ENST00000344204|TRIO;nc|ENSG00000038382|O75962-4|TRIO	ENSG00000160145|ENST00000682506|KALRN;nc|ENSG00000038382|O75962-5|TRIO	nc|ENSG00000038382|O75962-5|TRIO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77984619140625	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.87064	1	3291	3291		29.15	0	1	17256000			60120	14744;5556	40150	40166	68141	68141					0.10388447425282266
VALIIKPD	8	Unmodified	_VALIIKPD_					0	0	0		ENSG00000160145|ENST00000682506|KALRN;nc|ENSG00000160145|O60229|KALRN;nc|ENSG00000160145|O60229-2|KALRN;nc|ENSG00000038382|O75962-5|TRIO;nc|ENSG00000038382|O75962-2|TRIO;ENSG00000038382|ENST00000344204|TRIO;nc|ENSG00000038382|O75962-4|TRIO	ENSG00000160145|ENST00000682506|KALRN;nc|ENSG00000038382|O75962-5|TRIO	nc|ENSG00000038382|O75962-5|TRIO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801513671875	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.87922	1	3287	3287		31.955	0	1	15771000			60121	14744;5556	40150	40166	68142	68142					0.10388447425282266
VALIKGLV	8	Unmodified	_VALIKGLV_					0	0	0		ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	ENSG00000205808|ENST00000381883|PLPP6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7861633300781	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.85787	1	1669	1669		9.4706	0	1	1756100			60122	8541	40151	40167	68143	68143					0.1398105515052066
VALILATRGY	10	Unmodified	_VALILATRGY_					0	0	0			REV__ENSG00000183206|ENST00000358970|POTEC	REV__ENSG00000183206|ENST00000358970|POTEC	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8269653320312	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.97	1	113.94	113.44	114.44	-0.024452								0	0	0	0.45132	1	12617	12617		23.042	0	1		+		60123	21283	40152	40168	68144	68144					0.10418595265377917
VALILPTKG	9	Unmodified	_VALILPTKG_					0	0	0			REV__nc|ENSG00000135828|Q05823-2|RNASEL	REV__nc|ENSG00000135828|Q05823-2|RNASEL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30120849609375	2	456.299853	910.585153	-0.44225	-0.0002018	3.4332	0.0015666	2.9909	0.0013648	456.30129355969984	33.544	1.59	33.487	33.178	34.768	-0.056385					117	35	4	0	0	0	0.72402	1	2059	2059		38.806	5.2906	1	1715600	+		60124	19253	40153	40169	68145	68145					0.1262842283365444
VALILPTKG	9	Unmodified	_VALILPTKG_					0	0	0			REV__nc|ENSG00000135828|Q05823-2|RNASEL	REV__nc|ENSG00000135828|Q05823-2|RNASEL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3011779785156	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.76996	1	2008	2008		33.516	0	1	1220600	+		60125	19253	40153	40169	68146	68146					0.1262842283365444
VALINRAL	8	Unmodified	_VALINRAL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2804260253906	2	435.281995	868.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.91	1	62.018	61.518	62.518	0.10743								0	0	0	0.30125	1	5385	5385		20.482	0	1				60126	4449	40154	40170	68147	68147					0.10990385376669565
VALKVHPPGG	10	Unmodified	_VALKVHPPGG_					0	0	0			REV__nc|ENSG00000154914|Q70EL4-3|USP43	REV__nc|ENSG00000154914|Q70EL4-3|USP43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7901611328125	2	487.792727	973.5709	-1.4694	-0.00071678	-3.0475	-0.0014866	-4.5169	-0.0022033	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.86201	1	8200	8200		24.203	1.1603	1	607090	+		60127	20407	40155	40171	68148	68148					0.08305770405388557
VALKVPAN	8	Unmodified	_VALKVPAN_					0	0	0		nc|ENSG00000088888|Q7Z434-4|MAVS;ENSG00000088888|ENST00000428216|MAVS	nc|ENSG00000088888|Q7Z434-4|MAVS	nc|ENSG00000088888|Q7Z434-4|MAVS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2568054199219	2	406.255446	810.496338	1.9631	0.00079754	2.4509	0.00099569	4.414	0.0017932	406.25639366891517	55.168	1.6481	55.195	54.525	56.173	0.027142					71	44	2	0	0	0	0.81548	1	4958	4958		20.482	1.1219	1	211340			60128	1599	40156	40172	68149	68149					0.08351007593989834
VALLAAPGL	9	Unmodified	_VALLAAPGL_					0	0	0			REV__ENSG00000180264|ENST00000696331|ADGRD2;REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	REV__ENSG00000180264|ENST00000696331|ADGRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7671813964844	2	412.765646	823.516739	-0.024773	-1.0226E-05	2.7576	0.0011383	2.7329	0.001128	412.7671753724154	37.892	4.8812	37.868	35.596	40.477	-0.023979					267	113	4	0	0	0	0.7932	1	2452	2452		21.702	0	1	1546000	+		60129	22385;30068	40157	40173	68150	68150					0.09792178253815109
VALLAAPGL	9	Unmodified	_VALLAAPGL_					0	0	0			REV__ENSG00000180264|ENST00000696331|ADGRD2;REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	REV__ENSG00000180264|ENST00000696331|ADGRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2663269042969	2	412.765646	823.516739	0.8823	0.00036418	0.81659	0.00033706	1.6989	0.00070124	412.7668384055558	39.31	1.1423	39.322	38.717	39.86	0.011173					50	26	3	0	0	0	0.7932	1	2811	2811		21.702	0	1	209500	+		60130	22385;30068	40157	40173	68151	68151					0.09792178253815109
VALLAAPGL	9	Unmodified	_VALLAAPGL_					0	0	0			REV__ENSG00000180264|ENST00000696331|ADGRD2;REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	REV__ENSG00000180264|ENST00000696331|ADGRD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76678466796875	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.7932	1	2804	2804		21.702	0	1	818920	+		60131	22385;30068	40157	40173	68152	68152					0.09792178253815109
VALLADVVL	9	Unmodified	_VALLADVVL_					0	0	0		ENSG00000165688|ENST00000371717|PMPCA	ENSG00000165688|ENST00000371717|PMPCA	ENSG00000165688|ENST00000371717|PMPCA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.78924560546875	2	456.791861	911.569169	-0.3061	-0.00013982	2.8989	0.0013242	2.5928	0.0011844	456.793087234893	47.315	0.97255	47.228	46.595	47.568	-0.087646					50	30	2	0	0	0	0.7932	1	3537	3537		25.45	0	1	151160			60132	6112	40158	40174	68153	68153					0.10984716596760791
VALLADVVL	9	Unmodified	_VALLADVVL_					0	0	0		ENSG00000165688|ENST00000371717|PMPCA	ENSG00000165688|ENST00000371717|PMPCA	ENSG00000165688|ENST00000371717|PMPCA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7929992675781	2	456.791861	911.569169	-0.16145	-7.375E-05	3.0967	0.0014145	2.9352	0.0013408	456.79315790298426	37.204	0.82482	37.517	36.88	37.705	0.31312					71	19	4	0	0	0	0.7932	1	2989	2989		20.482	0	1	4730400			60133	6112	40158	40174	68154	68154					0.10984716596760791
VALLDLKP	8	Unmodified	_VALLDLKP_					0	0	0			REV__ENSG00000072657|ENST00000261180|TRHDE	REV__ENSG00000072657|ENST00000261180|TRHDE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7798767089844	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.88915	1	3779	3779		35.201	1.6851	1	2017500	+		60134	16652	40159	40175	68155	68155					0.10388447425282266
VALLGLKR	8	Unmodified	_VALLGLKR_					0	0	0			REV__ENST00000592514.5_3_19:10362578-10362897:+|nuORF	REV__ENST00000592514.5_3_19:10362578-10362897:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3002014160156	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.81548	1	6883	6883		20.482	1.1219	1	2081500	+		60135	29215	40160	40176	68156	68156					0.14627262273359065
VALLGLKR	8	Unmodified	_VALLGLKR_					0	0	0			REV__ENST00000592514.5_3_19:10362578-10362897:+|nuORF	REV__ENST00000592514.5_3_19:10362578-10362897:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.29925537109375	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.81548	2	8667	8417;8667		20.482	0.88877	1	5485100	+		60136	29215	40160	40176	68157;68158	68158					0.14627262273359065
VALLGLKR	8	Unmodified	_VALLGLKR_					0	0	0			REV__ENST00000592514.5_3_19:10362578-10362897:+|nuORF	REV__ENST00000592514.5_3_19:10362578-10362897:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001403808594	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81724	1	7653	7653		14.664	0	1	6323600	+		60137	29215	40160	40176	68159	68159					0.14627262273359065
VALLIGRCSFV	11	Unmodified	_VALLIGRCSFV_					0	0	0			REV__ENSG00000163874|ENST00000373087|ZC3H12A	REV__ENSG00000163874|ENST00000373087|ZC3H12A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3438720703125	2	589.341726	1176.6689	-0.3676	-0.00021664	2.4536	0.001446	2.086	0.0012294	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.65746	2	9536	9439;9536		37.812	3.1067	1	11103000	+		60138	20989	40161	40177	68160;68161	68161					0.08763210939059718
VALLIGRCSFV	11	Unmodified	_VALLIGRCSFV_					0	0	0			REV__ENSG00000163874|ENST00000373087|ZC3H12A	REV__ENSG00000163874|ENST00000373087|ZC3H12A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3425903320312	2	589.341726	1176.6689	-0.65438	-0.00038565	2.6476	0.0015603	1.9932	0.0011747	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.73893	1	9922	9922		24.519	0.99649	1	16804000	+		60139	20989	40161	40177	68162	68162					0.08763210939059718
VALLILLN	8	Unmodified	_VALLILLN_					0	0	0			REV__ENSG00000161807|ENST00000541538|OR7G1;REV__ENSG00000170923|ENST00000641081|OR7G2	REV__ENSG00000161807|ENST00000541538|OR7G1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.28497314453125	2	434.796946	867.57934	-0.81795	-0.00035564	-2.3605	-0.0010263	-3.1785	-0.001382	434.7959935677518	56.982	0.38192	57.379	57.116	57.498	0.39672					11	8	2	0	0	0	0.4196	1	5870	5870		19.36	0	1	88743	+		60140	20780;21699	40162	40178	68163	68163					0.14025324321994503
VALLILLN	8	Unmodified	_VALLILLN_					0	0	0			REV__ENSG00000161807|ENST00000541538|OR7G1;REV__ENSG00000170923|ENST00000641081|OR7G2	REV__ENSG00000161807|ENST00000541538|OR7G1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	434.796946	867.57934	-0.72476	-0.00031513	-1.2297	-0.00053466	-1.9544	-0.00084979	434.796838079764	57.05	0.059059	57.024	56.989	57.048	-0.026108	-0.1774	0.00082848	NaN	19.36	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26375	+		60141	20780;21699	40162	40178							0.14025324321994503
VALLLAAARLA	11	Unmodified	_VALLLAAARLA_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000469684.1_1_15:44038662-44048907:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.3555297851562	2	541.358234	1080.70191	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.97	1	112.91	112.41	113.41	-0.067215								0	0	0	0.56276	1	12265	12265		15.642	2.6826	1				60142	6260	40163	40179	68164	68164					0.16479161053416647
VALLLLPSLL	10	Unmodified	_VALLLLPSLL_					0	0	0		nc|ENSG00000063015|Q53EL9-3|SEZ6;ENSG00000063015|ENST00000317338|SEZ6;nc|ENSG00000063015|Q53EL9-4|SEZ6	nc|ENSG00000063015|Q53EL9-3|SEZ6	nc|ENSG00000063015|Q53EL9-3|SEZ6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3609008789062	2	526.359911	1050.70527	-1.5421	-0.00081169	4.0218	0.0021169	2.4797	0.0013052	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.86718	1	2230	2230		27.882	0	1	788470			60143	1087	40164	40180	68165	68165					0.18194411107424457
VALLLLPSLL	10	Unmodified	_VALLLLPSLL_					0	0	0		nc|ENSG00000063015|Q53EL9-3|SEZ6;ENSG00000063015|ENST00000317338|SEZ6;nc|ENSG00000063015|Q53EL9-4|SEZ6	nc|ENSG00000063015|Q53EL9-3|SEZ6	nc|ENSG00000063015|Q53EL9-3|SEZ6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3614501953125	2	526.359911	1050.70527	0.76967	0.00040513	1.4348	0.00075522	2.2045	0.0011603	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.86201	1	2427	2427		24.203	0	1	7968500			60144	1087	40164	40180	68166	68166					0.18194411107424457
VALLLLTRTDV	11	Unmodified	_VALLLLTRTDV_					0	0	0			REV__ENSG00000164692|ENST00000297268|COL1A2	REV__ENSG00000164692|ENST00000297268|COL1A2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.23724365234375	3	405.255334	1212.74417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.384	1	63.411	62.911	63.911	0.027142								0	0	0	0.56276	1	5933	5933		25.892	4.8595	1		+		60145	21105	40165	40181	68167	68167					0.14631091671117247
VALLLPGAP	9	Unmodified	_VALLLPGAP_					0	0	0		nc|ENSG00000167992|Q96DN2-2|VWCE;ENSG00000167992|ENST00000335613|VWCE	nc|ENSG00000167992|Q96DN2-2|VWCE	nc|ENSG00000167992|Q96DN2-2|VWCE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.77471923828125	2	425.773471	849.53239	0.17703	7.5374E-05	3.2935	0.0014023	3.4705	0.0014777	425.7747914132181	38.924	1.3455	39.012	38.418	39.764	0.088371					149	38	5	0	0	0	0.7932	1	2395	2395		21.702	0	1	14185000			60146	6352	40166	40182	68168	68168					0.10160464770854105
VALLLPGAP	9	Unmodified	_VALLLPGAP_					0	0	0		nc|ENSG00000167992|Q96DN2-2|VWCE;ENSG00000167992|ENST00000335613|VWCE	nc|ENSG00000167992|Q96DN2-2|VWCE	nc|ENSG00000167992|Q96DN2-2|VWCE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.77484130859375	2	425.773471	849.53239	-0.11951	-5.0886E-05	3.5324	0.001504	3.4129	0.0014531	425.7748940405711	39.012	1.3083	38.959	38.379	39.687	-0.052731					144	37	5	0	0	0	0.78292	3	2312	2312;2349;2387		29.842	0	1	13488000			60147	6352	40166	40182	68169;68170;68171	68169					0.10160464770854105
VALLLPGAP	9	Unmodified	_VALLLPGAP_					0	0	0		nc|ENSG00000167992|Q96DN2-2|VWCE;ENSG00000167992|ENST00000335613|VWCE	nc|ENSG00000167992|Q96DN2-2|VWCE	nc|ENSG00000167992|Q96DN2-2|VWCE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7746887207031	2	425.773471	849.53239	0.52804	0.00022483	2.6288	0.0011193	3.1568	0.0013441	425.7745403369288	37.544	1.064	38.03	37.492	38.556	0.48581					97	26	5	0	0	0	0.7932	1	3031	3031		21.702	0	1	42348000			60148	6352	40166	40182	68172	68172					0.10160464770854105
VALLLPGAP	9	Unmodified	_VALLLPGAP_					0	0	0		nc|ENSG00000167992|Q96DN2-2|VWCE;ENSG00000167992|ENST00000335613|VWCE	nc|ENSG00000167992|Q96DN2-2|VWCE	nc|ENSG00000167992|Q96DN2-2|VWCE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7747497558594	2	425.773471	849.53239	-0.27567	-0.00011737	3.7288	0.0015876	3.4531	0.0014702	425.77498181524743	38.327	1.6801	38.849	38.513	40.193	0.52235					122	39	5	0	0	0	0.78292	1	3169	3169		29.842	0	1	16884000			60149	6352	40166	40182	68173	68173					0.10160464770854105
VALLLSTKL	9	Unmodified	_VALLLSTKL_					0	0	0			REV__ENSG00000125744|ENST00000245923|RTN2	REV__ENSG00000125744|ENST00000245923|RTN2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.31256103515625	2	479.320786	956.627018	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.15	1	109.27	108.77	109.77	0.12289								0	0	0	0.30053	1	11763	11763		30.504	9.5567	1		+		60150	18665	40167	40183	68174	68174					0.14696978522169957
VALLLVEIS	9	Unmodified	_VALLLVEIS_					0	0	0			REV__ENSG00000170927|ENST00000371117|PKHD1	REV__ENSG00000170927|ENST00000371117|PKHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8053283691406	2	478.804968	955.595384	0.18646	8.928E-05	1.836	0.00087907	2.0224	0.00096835	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.7932	1	2886	2886		12.207	0	1	371600	+		60151	21700	40168	40184	68175	68175					0.11580985768239316
VALLPILTS	9	Unmodified	_VALLPILTS_					0	0	0		ENSG00000198838|ENST00000634891|RYR3;nc|ENSG00000198838|Q15413-2|RYR3;nc|ENSG00000198838|Q15413-3|RYR3	ENSG00000198838|ENST00000634891|RYR3	ENSG00000198838|ENST00000634891|RYR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.8011474609375	2	463.799686	925.584819	-1.9529	-0.00090576	3.5624	0.0016523	1.6095	0.0007465	463.801178460678	42.067	1.8831	42.764	41.947	43.83	0.69754					154	47	4	0	0	0	0.78058	1	3788	3788		30.504	0	1	6253400			60152	8348	40169	40185	68176	68176					0.11905003113804469
VALLPPDL	8	Unmodified	_VALLPPDL_					0	0	0			REV__ENSG00000139618|ENST00000380152|BRCA2	REV__ENSG00000139618|ENST00000380152|BRCA2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.2587890625	2	419.257654	836.500755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.309	1	69.375	68.875	69.875	0.065506								0	0	0	0.29694	1	6248	6248		37.028	0	1		+		60153	19554	40170	40186	68177	68177					0.0759647201689404
VALLPPGAL	9	Unmodified	_VALLPPGAL_					0	0	0		ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF	ENSG00000137642|ENST00000260197|SORL1	ENSG00000137642|ENST00000260197|SORL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.7748107910156	2	425.773471	849.53239	0.072338	3.08E-05	3.4421	0.0014656	3.5144	0.0014964	425.7748719136107	39.248	3.011	39.218	37.076	40.087	-0.03027					219	70	5	0	0	0	0.78292	1	2732	2732		29.842	0	1	15142000			60154	4219	40171	40187	68178	68178					0.10160464770854105
VALLPPGRRN	10	Unmodified	_VALLPPGRRN_					0	0	0			REV__ENST00000527315.5_1_15:69323805-69349033:+|nuORF	REV__ENST00000527315.5_1_15:69323805-69349033:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8401489257812	2	546.835457	1091.65636	3.386	0.0018516	4.2852	0.0023433	7.6712	0.0041949	546.8379771318001	101.02	3.777	100.97	100.36	104.13	-0.052116					284	90	6	0	0	0	0.6398	5	10954	10954;10978;11038;11074;11135		47.916	10.756	1	39176000	+		60155	28228	40172	40188	68179;68180;68181;68182;68183	68179					0.11419935591038666
VALLQPPL	8	Unmodified	_VALLQPPL_					0	0	0		ENSG00000183161|ENST00000327470|FANCF	ENSG00000183161|ENST00000327470|FANCF	ENSG00000183161|ENST00000327470|FANCF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.7747497558594	2	425.773471	849.53239	0.348	0.00014817	2.8727	0.0012231	3.2207	0.0013713	425.77466249920843	37.645	1.0176	37.958	37.411	38.429	0.31312					95	25	5	0	0	0	0.82464	1	3003	3003		21.702	0	1	45114000			60156	7505	40173	40189	68184	68184					0.10160464770854105
VALLQPPL	8	Unmodified	_VALLQPPL_					0	0	0		ENSG00000183161|ENST00000327470|FANCF	ENSG00000183161|ENST00000327470|FANCF	ENSG00000183161|ENST00000327470|FANCF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2575988769531	2	425.773471	849.53239	0.82228	0.00035011	2.8574	0.0012166	3.6797	0.0015667	425.7746072313763	34.303	0.89364	34.513	34.234	35.127	0.21002					30	21	2	0	0	0	0.4196	1	2564	2564		44.531	7.5026	1	126060			60157	7505	40173	40189	68185	68185					0.10160464770854105
VALLRDRTG	9	Unmodified	_VALLRDRTG_					0	0	0		nc|ENSG00000168079|Q6ZMJ2-3|SCARA5;nc|ENSG00000168079|Q6ZMJ2-2|SCARA5;ENSG00000168079|ENST00000354914|SCARA5	nc|ENSG00000168079|Q6ZMJ2-3|SCARA5	nc|ENSG00000168079|Q6ZMJ2-3|SCARA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.79644775390625	2	500.79854	999.582528	-1.6124	-0.00080748	-0.073319	-3.6718E-05	-1.6857	-0.0008442	500.79842715504543	94.334	1.559	94.532	94.244	95.803	0.19827					54	37	2	0	0	0	0.64555	1	9564	9564		44.377	10.205	1	438210			60158	6367	40174	40190	68186	68186					0.08271967428697735
VALLRSLSSA	10	Unmodified	_VALLRSLSSA_					0	0	0			REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.80670166015625	2	508.808574	1015.60259	0.33751	0.00017173	-2.0744	-0.0010555	-1.7369	-0.00088377	508.8074006535315	89.921	1.4701	89.969	89.439	90.909	0.048157					61	34	2	0	0	0	0.8651	1	9315	9315		25.574	3.6142	1	1159300	+		60159	28016	40175	40191	68187	68187					0.09541718368654983
VALLRSLSSA	10	Unmodified	_VALLRSLSSA_					0	0	0			REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.80621337890625	2	508.808574	1015.60259	-0.38303	-0.00019489	-3.6518	-0.001858	-4.0348	-0.0020529	508.80774374343616	89.543	1.6067	89.755	89.176	90.782	0.21271					125	37	6	0	0	0	0.86471	3	8934	8923;8934;8958		30.318	3.6142	1	1485200	+		60160	28016	40175	40191	68188;68189;68190	68189					0.09541718368654983
VALLRSLSSA	10	Unmodified	_VALLRSLSSA_					0	0	0			REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.80596923828125	2	508.808574	1015.60259	0.71176	0.00036215	-2.4409	-0.0012419	-1.7291	-0.00087978	508.807249712291	89.741	1.2834	89.893	89.353	90.637	0.1519					55	29	2	0	0	0	0.8651	1	8961	8961		25.574	3.6142	1	1480000	+		60161	28016	40175	40191	68191	68191					0.09541718368654983
VALLRSLSSA	10	Unmodified	_VALLRSLSSA_					0	0	0			REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.806396484375	2	508.808574	1015.60259	-1.5863	-0.00080713	-0.23955	-0.00012189	-1.8259	-0.00092901	508.8083574581473	89.656	1.4168	89.832	89.259	90.675	0.1758					59	32	2	0	0	0	0.8651	1	8909	8909		25.574	1.0549	1	1468400	+		60162	28016	40175	40191	68192	68192					0.09541718368654983
VALLRSLSSA	10	Unmodified	_VALLRSLSSA_					0	0	0			REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.8052978515625	2	508.808574	1015.60259	0.94338	0.00048	-2.2339	-0.0011366	-1.2905	-0.00065661	508.8073543874404	89.499	0.84901	89.949	89.406	90.255	0.45058					38	21	2	0	0	0	0.8651	1	10553	10553		25.574	3.6142	1	1156600	+		60163	28016	40175	40191	68193	68193					0.09541718368654983
VALLTRIF	8	Unmodified	_VALLTRIF_					0	0	0			REV__nc|ENSG00000140299|Q12982-2|BNIP2	REV__nc|ENSG00000140299|Q12982-2|BNIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.7975158691406	2	466.80002	931.585488	-1.1365	-0.00053052	-3.6971	-0.0017258	-4.8336	-0.0022563	466.7980880311773	18.854	0.8271	18.898	18.741	19.569	0.043749					69	39	3	0	0	0	0.85277	1	372	372		25.45	0	1	853540	+		60164	29888	40176	40192	68194	68194					0.11695842553524471
VALLVAVK	8	Unmodified	_VALLVAVK_					0	0	0			REV__chr19:18573748-18574842|51|15.12|0.89|4.09|+|2|UBA52,None|1	REV__chr19:18573748-18574842|51|15.12|0.89|4.09|+|2|UBA52,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852478027344	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.81724	1	1257	1257		14.664	0	1	1286900	+		60165	15691	40177	40193	68195	68195					0.13981055150509292
VALLVAVK	8	Unmodified	_VALLVAVK_					0	0	0			REV__chr19:18573748-18574842|51|15.12|0.89|4.09|+|2|UBA52,None|1	REV__chr19:18573748-18574842|51|15.12|0.89|4.09|+|2|UBA52,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78509521484375	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.81724	1	1400	1400		14.664	0	1	1817700	+		60166	15691	40177	40193	68196	68196					0.13981055150509292
VALNGKGAPR	10	Unmodified	_VALNGKGAPR_					0	0	0		ENSG00000070193|ENST00000264664|FGF10	ENSG00000070193|ENST00000264664|FGF10	ENSG00000070193|ENST00000264664|FGF10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79620361328125	2	491.793258	981.571963	0.2769	0.00013618	3.964	0.0019495	4.2409	0.0020856	491.79514627400846	43.393	1.1043	43.45	42.905	44.01	0.056744					45	26	2	0	0	0	0.8651	1	2999	2999		25.574	3.8717	1	192480			60167	1235	40178	40194	68197	68197					0.08043984774269575
VALNIHRVFVR	11	Unmodified	_VALNIHRVFVR_					0	0	0		ENSG00000168306|ENST00000302819|ACOX2	ENSG00000168306|ENST00000302819|ACOX2	ENSG00000168306|ENST00000302819|ACOX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2737731933594	3	441.938451	1322.79352	0.63201	0.00027931	2.4685	0.0010909	3.1005	0.0013702	441.93938161315157	55.264	1.2271	55.292	54.682	55.909	0.027142					77	31	3	0	0	0	0.76579	1	4994	4994		18.531	2.0012	1	422510			60168	6391	40179	40195	68198	68198					0.14503844470573313
VALNNGICK	9	Unmodified	_VALNNGICK_					0	0	0			REV__nc|ENSG00000122432|Q5VX52-2|SPATA1	REV__nc|ENSG00000122432|Q5VX52-2|SPATA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2565612792969	2	466.25512	930.495686	-1.5133	-0.00070558	-1.0867	-0.00050666	-2.6	-0.0012122	466.2545098406443	61.17	1.13	61.17	60.102	61.232	0					111	49	3	0	0	0	0.76996	1	5282	5282		33.516	6.7195	1	374960	+		60169	18496	40180	40196	68199	68199					0.027658448826400672
VALNNGICK	9	Unmodified	_VALNNGICK_					0	0	0			REV__nc|ENSG00000122432|Q5VX52-2|SPATA1	REV__nc|ENSG00000122432|Q5VX52-2|SPATA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.25494384765625	2	466.25512	930.495686	0.40858	0.0001905	-3.173	-0.0014794	-2.7644	-0.0012889	466.2535455662522	60.895	1.1821	61.014	60.015	61.197	0.11901					69	45	2	0	0	0	0.47272	1	5270	5270		53.351	10.877	1	266480	+		60170	18496	40180	40196	68200	68200					0.027658448826400672
VALPDELS	8	Unmodified	_VALPDELS_					0	0	0		nc|ENSG00000129003|Q709C8-2|VPS13C;ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;ENST00000558338.1_1_15:62199375-62209725:-|nuORF	nc|ENSG00000129003|Q709C8-2|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2283935546875	2	422.226551	842.438549	-0.34254	-0.00014463	3.7936	0.0016017	3.451	0.0014571	422.22799339483345	56.643	0.55728	56.614	56.308	56.865	-0.02866					41	25	2	0	0	0	0.86791	1	5184	5184		28.254	0	1	776510			60171	3570	40181	40197	68201	68201					0.011027008779137759
VALPELDS	8	Unmodified	_VALPELDS_					0	0	0			REV__nc|ENSG00000253305|Q9Y5F9-2|PCDHGB6	REV__nc|ENSG00000253305|Q9Y5F9-2|PCDHGB6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.59259033203125	2	422.226551	842.438549	1.7013	0.00071832	1.7764	0.00075006	3.4777	0.0014684	422.2272265521278	56.232	1.4977	56.262	54.891	56.389	0.030838					83	44	2	0	0	0	0.4196	1	4959	4959		37.028	0	1	775700	+		60172	23877	40182	40198	68202	68202					0.011027008779137759
VALPLSDE	8	Unmodified	_VALPLSDE_					0	0	0			REV__nc|ENSG00000188596|Q96N23-2|CFAP54	REV__nc|ENSG00000188596|Q96N23-2|CFAP54	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2288818359375	2	422.226551	842.438549	-0.74187	-0.00031324	4.0339	0.0017032	3.292	0.00139	422.22815757108447	56.228	1.1679	56.202	55.178	56.346	-0.026108					95	44	3	0	0	0	0.86791	1	4741	4741		28.254	2.8041	1	764250	+		60173	23015	40183	40199	68203	68203					0.011027008779024072
VALPPQLL	8	Unmodified	_VALPPQLL_					0	0	0			REV__nc|ENSG00000198483|Q8N283-2|ANKRD35	REV__nc|ENSG00000198483|Q8N283-2|ANKRD35	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7748718261719	2	425.773471	849.53239	0.52804	0.00022483	2.6288	0.0011193	3.1568	0.0013441	425.7745403369288	37.544	1.064	38.03	37.492	38.556	0.48581					97	26	5	0	0	0	0.82464	1	3055	3055		21.702	0	1	42348000	+		60174	30149	40184	40200	68204	68204					0.10160464770854105
VALPQLLA	8	Unmodified	_VALPQLLA_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2663269042969	2	412.765646	823.516739	1.2445	0.00051368	-1.8023	-0.00074392	-0.55779	-0.00023024	412.76609709283645	41.289	1.0546	41.296	40.74	41.795	0.0065727					35	27	2	0	0	0	0.90024	1	2975	2975		39.021	1.993	1	169780			60175	1975	40185	40201	68205	68205					0.0979217825380374
VALPTVSLL	9	Unmodified	_VALPTVSLL_					0	0	0			REV__ENST00000435805.6_1_10:43047647-43047983:-|nuORF	REV__ENST00000435805.6_1_10:43047647-43047983:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7920227050781	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.76996	1	2848	2848		33.516	0	1	605230	+		60176	26685	40186	40202	68206	68206					0.10984716596760791
VALPTVSLL	9	Unmodified	_VALPTVSLL_					0	0	0			REV__ENST00000435805.6_1_10:43047647-43047983:-|nuORF	REV__ENST00000435805.6_1_10:43047647-43047983:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7895202636719	2	456.791861	911.569169	1.3225	0.00060413	1.789	0.00081719	3.1115	0.0014213	456.79255750887523	35.219	1.7546	35.6	35.098	36.853	0.3812					157	44	4	0	0	0	0.7932	1	2873	2873		25.45	0	1	7423700	+		60177	26685	40186	40202	68207	68207					0.10984716596760791
VALQDRVP	8	Unmodified	_VALQDRVP_					0	0	0		ENSG00000187608|ENST00000649529|ISG15	ENSG00000187608|ENST00000649529|ISG15	ENSG00000187608|ENST00000649529|ISG15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2611083984375	2	449.261259	896.507966	0.4623	0.00020769	-1.961	-0.00088102	-1.4987	-0.00067333	449.2601838602414	68.559	0.73705	68.687	68.425	69.162	0.12838					49	28	2	0	0	0	0.86288	1	6204	6204		26.796	1.3459	1	227220			60178	7864	40187	40203	68208	68208					0.05557204617332445
VALQLALP	8	Unmodified	_VALQLALP_					0	0	0		ENST00000464324.5_1_11:64494776-64507712:-|nuORF;ENSG00000068831|ENST00000394432|RASGRP2;nc|ENSG00000068831|Q7LDG7-4|RASGRP2;ENST00000421556.5_1_11:64494776-64511570:-|nuORF;nc|ENSG00000068831|Q7LDG7-2|RASGRP2;ENST00000494001.5_1_11:64503317-64504482:-|nuORF;ENST00000465852.1_1_11:64502995-64504542:-|nuORF	ENST00000464324.5_1_11:64494776-64507712:-|nuORF	ENST00000464324.5_1_11:64494776-64507712:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7668151855469	2	412.765646	823.516739	-1.2234	-0.00050499	3.8954	0.0016079	2.6719	0.0011029	412.7673243915212	41.944	1.8566	41.905	41.33	43.186	-0.038223					75	44	2	0	0	0	0.89457	1	3261	3261		37.028	7.1869	1	796850			60179	1209	40188	40204	68209	68209					0.09792178253792372
VALQPPLL	8	Unmodified	_VALQPPLL_					0	0	0		ENSG00000205710|ENST00000381365|C17orf107	ENSG00000205710|ENST00000381365|C17orf107	ENSG00000205710|ENST00000381365|C17orf107	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.7747802734375	2	425.773471	849.53239	0.17703	7.5374E-05	3.2935	0.0014023	3.4705	0.0014777	425.7747914132181	38.924	1.3455	39.012	38.418	39.764	0.088371					149	38	5	0	0	0	0.80963	1	2413	2413		15.636	0	1	14185000			60180	8537	40189	40205	68210	68210					0.10160464770854105
VALQPPLL	8	Unmodified	_VALQPPLL_					0	0	0		ENSG00000205710|ENST00000381365|C17orf107	ENSG00000205710|ENST00000381365|C17orf107	ENSG00000205710|ENST00000381365|C17orf107	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.7747802734375	2	425.773471	849.53239	-0.11951	-5.0886E-05	3.5324	0.001504	3.4129	0.0014531	425.7748940405711	39.012	1.3083	38.959	38.379	39.687	-0.052731					144	37	5	0	0	0	0.82464	1	2339	2339		21.702	0	1	13488000			60181	8537	40189	40205	68211	68211					0.10160464770854105
VALQWPIR	8	Unmodified	_VALQWPIR_					0	0	0			REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7953796386719	2	491.795269	981.575986	0.019467	9.5736E-06	1.1365	0.00055891	1.1559	0.00056849	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.85277	1	4512	4512		25.45	3.4903	1	310050	+		60182	28211	40190	40206	68212	68212					0.08446074267988024
VALQWPIR	8	Unmodified	_VALQWPIR_					0	0	0			REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7947692871094	2	491.795269	981.575986	-2.3785	-0.0011697	1.9836	0.00097551	-0.39493	-0.00019422	491.79615834302405	43.462	1.3116	43.459	43.021	44.333	-0.0024452					60	31	3	0	0	0	0.86288	1	3312	3312		26.796	0	1	272230	+		60183	28211	40190	40206	68213	68213					0.08446074267988024
VALQWPIR	8	Unmodified	_VALQWPIR_					0	0	0			REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.29766845703125	2	491.795269	981.575986	-1.9211	-0.00094481	3.072	0.0015108	1.1509	0.00056599	491.7967978123057	73.119	0.75326	73.161	72.514	73.267	0.042114					44	31	2	0	0	0	0.86288	1	7065	7065		26.796	0	1	96217	+		60184	28211	40190	40206	68214	68214					0.08446074267988024
VALQWPIR	8	Unmodified	_VALQWPIR_					0	0	0			REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79595947265625	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.85277	1	4748	4748		25.45	0	1	1759500	+		60185	28211	40190	40206	68215	68215					0.08446074267988024
VALQWPIR	8	Unmodified	_VALQWPIR_					0	0	0			REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79571533203125	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.86288	1	4066	4066		26.796	0	1	581270	+		60186	28211	40190	40206	68216	68216					0.08446074267988024
VALQWPIR	8	Unmodified	_VALQWPIR_					0	0	0			REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7953796386719	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.884	1	4477	4477		33.516	6.7195	1	748320	+		60187	28211	40190	40206	68217	68217					0.08446074267988024
VALQWPIR	8	Unmodified	_VALQWPIR_					0	0	0			REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7960510253906	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.86288	1	4006	4006		26.796	0	1	412030	+		60188	28211	40190	40206	68218	68218					0.08446074267988024
VALQWPIR	8	Unmodified	_VALQWPIR_					0	0	0			REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	REV__ENST00000526535.1_1_11:111233912-111234038:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7962341308594	2	491.795269	981.575986	-1.9178	-0.00094317	0.68391	0.00033634	-1.2339	-0.00060683	491.795512765235	43.373	1.1256	44.147	43.54	44.665	0.77379					67	27	3	0	0	0	0.884	1	3905	3905		33.516	6.7195	1	1540600	+		60189	28211	40190	40206	68219	68219					0.08446074267988024
VALRARQVLIA	11	Unmodified	_VALRARQVLIA_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92938232421875	3	403.931185	1208.77173	-1.975	-0.00079776	-4.1289	-0.0016678	-6.1039	-0.0024656	403.9294096595759	43	1.2076	43.71	43.311	44.519	0.71021					95	29	4	0	0	0	0.77937	1	3884	3884		9.6461	0.43434	1	4109900			60190	9032	40191	40207	68220	68220					0.1756903972204782
VALRKLVQEPR	11	Unmodified	_VALRKLVQEPR_					0	0	0			REV__ENST00000570069.5_1_16:1823417-1825633:+|nuORF	REV__ENST00000570069.5_1_16:1823417-1825633:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2738037109375	3	436.941861	1307.80375	-1.5892	-0.00069437	-3.223	-0.0014083	-4.8122	-0.0021026	436.9403019819708	46.415	1.4859	46.431	45.966	47.452	0.015511					115	41	4	0	0	0	0.75121	1	3402	3402		21.78	0.94327	1	814020	+		60191	23268	40192	40208	68221	68221					0.1621640740515886
VALSDLDVSPL	11	Unmodified	_VALSDLDVSPL_					0	0	0			REV__ENST00000481771.5_1_1:155179042-155180448:+|nuORF	REV__ENST00000481771.5_1_1:155179042-155180448:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.8104858398438	2	564.810979	1127.6074	-0.37649	-0.00021265	-0.22054	-0.00012456	-0.59703	-0.00033721	564.8107495054859	109.87	1.7926	109.87	109.6	111.4	0					169	64	4	0	0	0	0.63176	1	11412	11412		40.778	7.9657	1	3988700	+		60192	21896	40193	40209	68222	68222					0.048705577207556416
VALSFAYVL	9	Unmodified	_VALSFAYVL_					0	0	0			REV__ENST00000536388.5_1_12:6559784-6560133:-|nuORF	REV__ENST00000536388.5_1_12:6559784-6560133:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.78021240234375	2	491.784036	981.553519	-0.022145	-1.0891E-05	-3.7149	-0.0018269	-3.737	-0.0018378	491.7819409897417	50.275	0.86578	50.723	50.307	51.173	0.44761					50	20	4	0	0	0	0.3636	1	4929	4929		60.294	2.4827	1	1878200	+		60193	28405	40194	40210	68223	68223					0.062004300797070755
VALSLDEP	8	Unmodified	_VALSLDEP_					0	0	0			REV__ENSG00000100941|ENST00000216832|PNN	REV__ENSG00000100941|ENST00000216832|PNN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5930480957031	2	422.226551	842.438549	1.9519	0.00082413	2.2738	0.00096007	4.2257	0.0017842	422.2274047901474	53.794	2.1568	53.816	52.758	54.915	0.022541					125	64	3	0	0	0	0.4196	1	4871	4871		26.796	0	1	359810	+		60194	17230	40195	40211	68224	68224					0.011027008779137759
VALSTTFI	8	Unmodified	_VALSTTFI_					0	0	0			REV__ENST00000511718.5_1_5:79814732-79837648:+|nuORF	REV__ENST00000511718.5_1_5:79814732-79837648:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2461242675781	2	426.247286	850.48002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.827	1	86.894	86.394	87.394	0.067444								0	0	0	0.29353	1	8761	8761		28.254	0	1		+		60195	27973	40196	40212	68225	68225					0.04879881637236849
VALSTVRLSA	10	Unmodified	_VALSTVRLSA_					0	0	0		ENST00000287598.10_1_15:40498595-40498655:+|nuORF	ENST00000287598.10_1_15:40498595-40498655:+|nuORF	ENST00000287598.10_1_15:40498595-40498655:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.8042297363281	2	508.808574	1015.60259	-0.68521	-0.00034864	-0.65536	-0.00033345	-1.3406	-0.00068209	508.8081192090242	89.422	0.79648	89.892	89.476	90.273	0.47068					37	19	2	0	0	0	0.77314	1	10578	10578		40.778	9.2484	1	1252700			60196	9659	40197	40213	68226	68226					0.09541718368654983
VALSWKPGAS	10	Unmodified	_VALSWKPGAS_					0	0	0		nc|ENSG00000164318|Q63HQ2|EGFLAM;ENSG00000164318|ENST00000322350|EGFLAM	nc|ENSG00000164318|Q63HQ2|EGFLAM	nc|ENSG00000164318|Q63HQ2|EGFLAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.28070068359375	2	508.282192	1014.54983	-0.38511	-0.00019575	-3.5589	-0.0018089	-3.944	-0.0020047	508.28029410514995	88.272	2.579	88.735	87.686	90.265	0.46312					198	63	4	0	0	0	0.78666	1	10495	10495		40.058	4.9061	1	2008000			60197	5954	40198	40214	68227	68227					0.04313760305853975
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.76702880859375	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.85277	1	2618	2618		25.45	3.7478	1	795210			60198	14782	40199	40215	68228	68228					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.76708984375	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.85277	2	2941	2875;2941		35.201	3.7478	1	681490			60199	14782	40199	40215	68229;68230	68230					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.766845703125	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.884	2	2669	2669;2836		42.474	8.9589	1	2097300			60200	14782	40199	40215	68231;68232	68231					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2673645019531	2	412.765646	823.516739	0.8823	0.00036418	0.81659	0.00033706	1.6989	0.00070124	412.7668384055558	39.31	1.1423	39.322	38.717	39.86	0.011173					50	26	3	0	0	0	0.91005	2	2763	2763;2793		42.474	3.6683	1	209500			60201	14782	40199	40215	68233;68234	68233					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76605224609375	2	412.765646	823.516739	1.7264	0.0007126	-0.38001	-0.00015685	1.3464	0.00055574	412.76591463484067	43.938	1.9031	43.935	42.891	44.794	-0.0024452					92	45	3	0	0	0	0.81548	1	3433	3433		20.482	1.1219	1	293260			60202	14782	40199	40215	68235	68235					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7670593261719	2	412.765646	823.516739	-1.8992	-0.00078392	4.1525	0.001714	2.2533	0.0009301	412.76765198426614	41.794	3.0272	41.798	40.935	43.962	0.0043983					161	84	4	0	0	0	0.884	1	2799	2799		33.516	8.0654	1	640430			60203	14782	40199	40215	68236	68236					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.26983642578125	2	412.765646	823.516739	-1.8859	-0.00077844	3.9578	0.0016337	2.0719	0.00085522	412.7678129581843	48.855	3.3742	48.881	47.541	50.915	0.025574					176	94	2	0	0	0	0.87479	1	3668	3668		30.504	0.6621	1	621000			60204	14782	40199	40215	68237	68237					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7664489746094	2	412.765646	823.516739	-1.8818	-0.00077676	3.6465	0.0015051	1.7646	0.00072837	412.7678046235096	51.389	1.3986	51.424	50.891	52.29	0.034584					78	43	3	0	0	0	0.86791	1	4048	4048		28.254	7.7724	1	257640			60205	14782	40199	40215	68238	68238					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26702880859375	2	412.765646	823.516739	0.29216	0.00012059	0.97906	0.00040412	1.2712	0.00052472	412.7669032783796	51.677	2.3681	51.737	50.932	53.3	0.059719					122	72	2	0	0	0	0.85277	1	4056	4056		25.45	3.7478	1	250130			60206	14782	40199	40215	68239	68239					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7670593261719	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.543	1	37.642	37.142	38.142	0.099277								0	0	0	0.29245	1	2160	2160		30.504	5.0535	1				60207	14782	40199	40215	68240	68240					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.268798828125	2	412.765646	823.516739	-0.21056	-8.6912E-05	2.569	0.0010604	2.3584	0.00097348	412.76685422643334	40.116	1.6377	40.068	39.082	40.719	-0.04789					115	51	3	0	0	0	0.87479	3	2373	2373;2381;2401		40.573	7.057	1	699640			60208	14782	40199	40215	68241;68242;68243	68241					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.766845703125	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.86791	2	2771	2771;2870		30.504	1.3541	1	818920			60209	14782	40199	40215	68244;68245	68244					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.26727294921875	2	412.765646	823.516739	-0.52852	-0.00021815	2.9286	0.0012088	2.4001	0.00099068	412.76723094642836	48.755	3.2946	48.662	47.534	50.828	-0.093178					192	86	3	0	0	0	0.884	1	3615	3615		33.516	3.674	1	594400			60210	14782	40199	40215	68246	68246					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7669982910156	2	412.765646	823.516739	1.2585	0.00051947	2.4286	0.0010024	3.6871	0.0015219	412.7665201070099	37.01	2.3211	37.292	35.703	38.024	0.28173					152	57	4	0	0	0	0.884	1	2905	2905		33.516	3.674	1	3102100			60211	14782	40199	40215	68247	68247					0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	412.765646	823.516739	-0.25063	-0.00010345	3.2969	0.0013609	3.0463	0.0012574	412.766806508665	43.137	0.8487	43.57	43.295	44.143	0.4334	-0.18023	0.00069154	NaN	20.482	39	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	615240			60212	14782	40199	40215							0.0979217825380374
VALTKPVP	8	Unmodified	_VALTKPVP_					0	0	0		nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	nc|ENSG00000077942|P23142-4|FBLN1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	412.765646	823.516739	-1.8661	-0.00077025	5.3356	0.0022024	3.4695	0.0014321	412.76772676429647	42.762	0.97528	43.46	43.091	44.067	0.69754	-0.29053	0.0023745	NaN	20.482	41	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	759940			60213	14782	40199	40215							0.0979217825380374
VALTPLVVT	9	Unmodified	_VALTPLVVT_					0	0	0			REV__ENSG00000166002|ENST00000298966|SMCO4	REV__ENSG00000166002|ENST00000298966|SMCO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7930908203125	2	456.791861	911.569169	-0.042653	-1.9484E-05	2.8269	0.0012913	2.7842	0.0012718	456.79307389883803	36.432	2.1584	36.413	35.42	37.578	-0.018673					171	47	5	0	0	0	0.78058	1	2367	2367		30.504	1.3541	1	4460800	+		60214	21240	40200	40216	68248	68248					0.10984716596760791
VALTPLVVT	9	Unmodified	_VALTPLVVT_					0	0	0			REV__ENSG00000166002|ENST00000298966|SMCO4	REV__ENSG00000166002|ENST00000298966|SMCO4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79315185546875	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.77546	1	2003	2003		31.955	2.8053	1	3484100	+		60215	21240	40200	40216	68249	68249					0.10984716596760791
VALTPLVVT	9	Unmodified	_VALTPLVVT_					0	0	0			REV__ENSG00000166002|ENST00000298966|SMCO4	REV__ENSG00000166002|ENST00000298966|SMCO4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7931213378906	2	456.791861	911.569169	0.17991	8.2183E-05	2.7362	0.0012499	2.9161	0.001332	456.7930101461281	36.153	2.2506	36.256	35.136	37.386	0.10306					210	68	4	0	0	0	0.72402	3	1993	1957;1976;1993		38.806	2.4077	1	3531000	+		60216	21240	40200	40216	68250;68251;68252	68252					0.10984716596760791
VALTPLVVT	9	Unmodified	_VALTPLVVT_					0	0	0			REV__ENSG00000166002|ENST00000298966|SMCO4	REV__ENSG00000166002|ENST00000298966|SMCO4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7919006347656	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.7932	1	2829	2829		24.203	1.1603	1	605230	+		60217	21240	40200	40216	68253	68253					0.10984716596760791
VALTPWRGL	9	Unmodified	_VALTPWRGL_					0	0	0			REV__ENST00000519531.5_1_20:61914279-61914831:+|nuORF	REV__ENST00000519531.5_1_20:61914279-61914831:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.80023193359375	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.393	1	43.393	42.893	43.893	0								0	0	0	0.28223	1	3075	3075		37.812	8.662	1		+		60218	28082	40201	40217	68254	68254					0.0812205692243424
VALTPWRGL	9	Unmodified	_VALTPWRGL_					0	0	0			REV__ENST00000519531.5_1_20:61914279-61914831:+|nuORF	REV__ENST00000519531.5_1_20:61914279-61914831:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.7994689941406	2	506.800552	1011.58655	-0.74642	-0.00037829	1.5683	0.00079484	0.82192	0.00041655	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.74721	2	3751	3751;3800		37.159	4.3467	1	258120	+		60219	28082	40201	40217	68255;68256	68255					0.0812205692243424
VALTPWRGL	9	Unmodified	_VALTPWRGL_					0	0	0			REV__ENST00000519531.5_1_20:61914279-61914831:+|nuORF	REV__ENST00000519531.5_1_20:61914279-61914831:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.7996520996094	2	506.800552	1011.58655	-0.8825	-0.00044725	0.87145	0.00044165	-0.011057	-5.6038E-06	506.8008725439838	42.168	3.4048	42.866	41.632	45.037	0.69754					178	86	3	0	0	0	0.74721	1	3718	3718		37.159	5.6293	1	1296600	+		60220	28082	40201	40217	68257	68257					0.0812205692243424
VALVLIGK	8	Unmodified	_VALVLIGK_					0	0	0			REV__ENSG00000206384|ENST00000358511|COL6A6	REV__ENSG00000206384|ENST00000358511|COL6A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7850646972656	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.81724	2	1836	1692;1836		14.664	0	1	1606100	+		60221	23587	40202	40218	68258;68259	68259					0.1398105515053203
VALVLIGK	8	Unmodified	_VALVLIGK_					0	0	0			REV__ENSG00000206384|ENST00000358511|COL6A6	REV__ENSG00000206384|ENST00000358511|COL6A6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852783203125	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.86294	1	1545	1545		8.8223	0	1	1817700	+		60222	23587	40202	40218	68260	68260					0.1398105515053203
VALVLPIAS	9	Unmodified	_VALVLPIAS_					0	0	0			REV__ENSG00000186188|ENST00000371481|FFAR4	REV__ENSG00000186188|ENST00000371481|FFAR4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7880554199219	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.7932	1	3329	3329		19.36	5.5846	1	4170800	+		60223	22831	40203	40219	68261	68261					0.11308733942337312
VALVLPIAS	9	Unmodified	_VALVLPIAS_					0	0	0			REV__ENSG00000186188|ENST00000371481|FFAR4	REV__ENSG00000186188|ENST00000371481|FFAR4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7875061035156	2	441.786579	881.558604	-1.1834	-0.00052282	2.9635	0.0013093	1.7801	0.00078643	441.78771241232647	40.14	0.99562	40.729	39.913	40.908	0.58915					63	23	3	0	0	0	0.7932	1	3323	3323		19.36	0	1	2890500	+		60224	22831	40203	40219	68262	68262					0.11308733942337312
VALVLPRRK	9	Unmodified	_VALVLPRRK_					0	0	0			REV__ENST00000527321.1_1_11:77851057-77852843:+|nuORF	REV__ENST00000527321.1_1_11:77851057-77852843:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3607788085938	2	526.358568	1050.70258	1.057	0.00055634	4.0611	0.0021376	5.1181	0.0026939	526.3605624063631	36.088	1.9344	36.37	35.78	37.714	0.28173					146	47	5	0	0	0	0.7932	1	2798	2798		25.45	1.2474	1	5773200	+		60225	28229	40204	40220	68263	68263					0.1792600049311659
VALVPESE	8	Unmodified	_VALVPESE_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.2286071777344	2	422.226551	842.438549	-0.34254	-0.00014463	3.7936	0.0016017	3.451	0.0014571	422.22799339483345	56.643	0.55728	56.614	56.308	56.865	-0.02866					41	25	2	0	0	0	0.89457	1	5202	5202		37.028	10.232	1	776510	+		60226	20437;29946	40205	40221	68264	68264					0.011027008779137759
VALVPESE	8	Unmodified	_VALVPESE_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.59271240234375	2	422.226551	842.438549	0.31181	0.00013165	3.6201	0.0015285	3.9319	0.0016601	422.22805056221637	53.754	2.5265	53.836	52.959	55.486	0.081524					92	68	2	0	0	0	0.4196	1	4490	4490		19.36	5.5846	1	388950	+		60227	20437;29946	40205	40221	68265	68265					0.011027008779137759
VALVPVLN	8	Unmodified	_VALVPVLN_					0	0	0		nc|ENSG00000205356|Q7Z6L1-3|TECPR1;ENSG00000205356|ENST00000447648|TECPR1;nc|ENSG00000205356|Q7Z6L1-2|TECPR1;nc|ENSG00000205356|Q7Z6L1-4|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.767333984375	2	412.765646	823.516739	-0.024773	-1.0226E-05	2.7576	0.0011383	2.7329	0.001128	412.7671753724154	37.892	4.8812	37.868	35.596	40.477	-0.023979					267	113	4	0	0	0	0.87276	1	2500	2500		29.842	0	1	1546000			60228	8527	40206	40222	68266	68266					0.0979217825380374
VALVSAPPN	9	Unmodified	_VALVSAPPN_					0	0	0			REV__ENSG00000148343|ENST00000684074|MIGA2	REV__ENSG00000148343|ENST00000684074|MIGA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.78021240234375	2	434.25036	866.486168	-1.6644	-0.00072276	-1.0154	-0.00044096	-2.6798	-0.0011637	434.25056956311147	34.517	0.17303	34.556	34.462	34.635	0.038639					7	5	2	0	0	0	0.20789	1	1746	1746		20.947	5.3051	1	16422	+		60229	20109	40207	40223	68267	68267					0.04758399868762808
VALVTIPVA	9	Unmodified	_VALVTIPVA_					0	0	0			REV__ENSG00000227507|ENST00000429299|LTB	REV__ENSG00000227507|ENST00000429299|LTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7870178222656	2	441.786579	881.558604	0.11096	4.9022E-05	2.7998	0.0012369	2.9108	0.0012859	441.7877261622205	39.374	4.038	39.344	36.765	40.803	-0.03027					293	97	6	0	0	0	0.7932	1	2871	2871		13.775	0	1	15753000	+		60230	23747	40208	40224	68268	68268					0.11308733942325944
VALVVQLP	8	Unmodified	_VALVVQLP_					0	0	0		ENSG00000174982|ENST00000641692|OR4S2	ENSG00000174982|ENST00000641692|OR4S2	ENSG00000174982|ENST00000641692|OR4S2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.77423095703125	2	419.773471	837.53239	0.21096	8.8557E-05	2.9652	0.0012447	3.1762	0.0013333	419.7746098075956	42.625	4.0012	42.596	41.305	45.306	-0.029461					258	95	5	0	0	0	0.83466	1	3405	3405		23.037	0	1	10965000			60231	6980	40209	40225	68269	68269					0.10712464770847419
VALVVQLP	8	Unmodified	_VALVVQLP_					0	0	0		ENSG00000174982|ENST00000641692|OR4S2	ENSG00000174982|ENST00000641692|OR4S2	ENSG00000174982|ENST00000641692|OR4S2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7756652832031	2	419.773471	837.53239	2.2196	0.00093172	1.7406	0.00073065	3.9602	0.0016624	419.7741067165764	52.137	1.9692	52.15	50.995	52.964	0.01244					76	47	2	0	0	0	0.87807	1	4565	4565		31.579	0	1	186930			60232	6980	40209	40225	68270	68270					0.10712464770847419
VALVVQLP	8	Unmodified	_VALVVQLP_					0	0	0		ENSG00000174982|ENST00000641692|OR4S2	ENSG00000174982|ENST00000641692|OR4S2	ENSG00000174982|ENST00000641692|OR4S2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7749938964844	2	419.773471	837.53239	0.20815	8.7377E-05	3.1288	0.0013134	3.337	0.0014008	419.7746735534502	42.499	2.576	42.564	41.699	44.275	0.065033					210	66	5	0	0	0	0.90024	1	2890	2890		39.021	0	1	10440000			60233	6980	40209	40225	68271	68271					0.10712464770847419
VALWKVRF	8	Unmodified	_VALWKVRF_					0	0	0			REV__ENSG00000171928|ENST00000307767|TVP23B	REV__ENSG00000171928|ENST00000307767|TVP23B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	510.81396484375	2	509.813462	1017.61237	-1.3589	-0.00069277	1.5949	0.00081312	0.23608	0.00012036	509.8150981233718	81.653	0.21927	81.767	81.613	81.832	0.11426					5	4	2	0	0	0	0.4196	1	7779	7779		8.8223	0.12863	1	18565	+		60234	21785	40210	40226	68272	68272					0.10426951164708953
VALWPRALS	9	Unmodified	_VALWPRALS_					0	0	0		ENST00000361483.4_1_12:111799708-111799846:-|nuORF;nc|ENSG00000198324|Q8N4B1-3|PHETA1	ENST00000361483.4_1_12:111799708-111799846:-|nuORF	ENST00000361483.4_1_12:111799708-111799846:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.7987060546875	2	506.800552	1011.58655	0.3226	0.0001635	1.0842	0.00054946	1.4068	0.00071296	506.80101494321997	46.369	1.6079	46.407	46.092	47.7	0.038181					96	46	3	0	0	0	0.77546	1	3373	3373		31.955	0	1	231410			60235	10477	40211	40227	68273	68273					0.08122056922411502
VALYAISA	8	Unmodified	_VALYAISA_					0	0	0		ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2321472167969	2	404.234179	806.453805	-1.1763	-0.00047548	-1.8877	-0.00076306	-3.0639	-0.0012385	404.2332516475387	87.889	2.5286	87.889	87.338	89.866	0					125	58	3	0	0	0	0.87276	1	8446	8446		29.842	0	1	234310			60236	5816	40212	40228	68274	68274					0.042836124657469554
VALYAISA	8	Unmodified	_VALYAISA_					0	0	0		ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.23199462890625	2	404.234179	806.453805	-1.8204	-0.00073588	-0.96943	-0.00039188	-2.7898	-0.0011278	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.82464	1	8203	8203		21.702	2.3424	1	4754100			60237	5816	40212	40228	68275	68275					0.042836124657469554
VALYAISA	8	Unmodified	_VALYAISA_					0	0	0		ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	404.234179	806.453805	-0.187	-7.5591E-05	-2.7937	-0.0011293	-2.9807	-0.0012049	404.23291240260653	87.786	2.5034	87.853	87.271	89.774	0.067711	0.10987	0.00021945	NaN	29.842	115	58	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	361830			60238	5816	40212	40228							0.042836124657469554
VALYAISA	8	Unmodified	_VALYAISA_					0	0	0		ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	404.234179	806.453805	3.0556	0.0012352	-6.0588	-0.0024492	-3.0032	-0.001214	404.23159799278375	87.513	2.7097	87.566	86.822	89.531	0.053024	-0.17786	-0.0024203	NaN	29.842	110	63	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338820			60239	5816	40212	40228							0.042836124657469554
VALYAISA	8	Unmodified	_VALYAISA_					0	0	0		ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	404.234179	806.453805	-1.8144	-0.00073346	-1.2735	-0.00051478	-3.0879	-0.0012482	404.2335471903222	87.44	2.654	87.641	87.026	89.68	0.20115	-0.10246	0.0014485	NaN	29.842	144	62	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	363580			60240	5816	40212	40228							0.042836124657469554
VALYAISA	8	Unmodified	_VALYAISA_					0	0	0		ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	404.234179	806.453805	0.62381	0.00025216	-3.6626	-0.0014806	-3.0388	-0.0012284	404.23255848249664	87.573	3.9037	87.722	87.164	91.068	0.14956	-0.021188	-0.00048307	NaN	29.842	146	92	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	287050			60241	5816	40212	40228							0.042836124657469554
VALYAISA	8	Unmodified	_VALYAISA_					0	0	0		ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	404.234179	806.453805	-1.9194	-0.00077587	-1.2125	-0.00049013	-3.1318	-0.001266	404.23359414570405	87.488	2.5102	87.658	87.089	89.6	0.16922	-0.085752	0.0014978	NaN	29.842	89	58	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	280820			60242	5816	40212	40228							0.042836124657469554
VALYAISA	8	Unmodified	_VALYAISA_					0	0	0		ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	404.234179	806.453805	1.6366	0.00066155	-4.7411	-0.0019165	-3.1046	-0.001255	404.2320952335729	87.34	2.6717	87.787	87.142	89.814	0.44628	0.043298	-0.001355	NaN	29.842	108	64	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	342700			60243	5816	40212	40228							0.042836124657469554
VALYAISA	8	Unmodified	_VALYAISA_					0	0	0		ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	ENSG00000163527|ENST00000295770|STT3B	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	404.234179	806.453805	-1.1403	-0.00046097	-1.962	-0.00079311	-3.1023	-0.0012541	404.23329152343103	87.459	2.5216	87.922	87.233	89.755	0.46312	0.17856	0.00089184	NaN	29.842	78	61	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	253210			60244	5816	40212	40228							0.042836124657469554
VAMIPQKN	8	Unmodified	_VAMIPQKN_					0	0	0		ENSG00000141200|ENST00000268919|KIF2B	ENSG00000141200|ENST00000268919|KIF2B	ENSG00000141200|ENST00000268919|KIF2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.75390625	2	450.752213	899.489873	0.5597	0.00025229	3.7702	0.0016994	4.3299	0.0019517	450.7538239580323	79.562	2.1146	79.701	78.151	80.265	0.13883					102	73	2	0	0	0	0.88915	1	7618	7618		35.201	3.2459	1	128600			60245	4482	40213	40229	68276	68276					0.036107463709754484
VAMKLVTKH	9	Unmodified	_VAMKLVTKH_					0	0	0		ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8088989257812	2	513.810062	1025.60557	-1.3833	-0.00071076	-0.62879	-0.00032308	-2.0121	-0.0010338	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.78983	1	4328	4328		27.882	2.3082	1	1148600			60246	6988	40214	40230	68277	68277					0.09379270221802471
VAMKLVTKH	9	Unmodified	_VAMKLVTKH_					0	0	0		ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8088989257812	2	513.810062	1025.60557	-0.15906	-8.1728E-05	-1.9421	-0.00099788	-2.1012	-0.0010796	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.69624	1	3778	3778		40.778	10.275	1	1484700			60247	6988	40214	40230	68278	68278					0.09379270221802471
VANALAHR	8	Unmodified	_VANALAHR_					0	0	0		CON__Q3SX09;CON__P02070	CON__Q3SX09	CON__Q3SX09	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	426.24578857421875	2	426.245944	850.477334	-1.1835	-0.00050446	1.4503	0.00061817	0.26676	0.0001137	426.24646575286147	87.846	4.0837	87.846	85.783	89.866	0					184	94	2	0	0	0	0.80706	1	8492	8492		19.36	0	1	2605100		+	60248	620	40215	40231	68279	68279					0.046114710229517186
VANFRRVPR	9	Unmodified	_VANFRRVPR_					0	0	0		ENSG00000107719|ENST00000263563|PALD1	ENSG00000107719|ENST00000263563|PALD1	ENSG00000107719|ENST00000263563|PALD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.8309326171875	2	557.833249	1113.65194	0.055659	3.1049E-05	-1.3752	-0.00076712	-1.3195	-0.00073607	557.8323863083609	20.23	0.34261	20.301	20.141	20.484	0.071127					22	13	2	0	0	0	0.74721	1	475	475		37.159	4.3467	1	80845			60249	2360	40216	40232	68280	68280					0.099664711681271
VANFRRVPR	9	Unmodified	_VANFRRVPR_					0	0	0		ENSG00000107719|ENST00000263563|PALD1	ENSG00000107719|ENST00000263563|PALD1	ENSG00000107719|ENST00000263563|PALD1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	557.833249	1113.65194	1.0525	0.00058715	-2.3634	-0.0013184	-1.3108	-0.00073122	557.8317595803422	20.58	0.42451	20.515	20.343	20.768	-0.06543	0.083696	-0.00092254	NaN	37.159	28	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60059			60250	2360	40216	40232							0.099664711681271
VANIKRFF	8	Unmodified	_VANIKRFF_					0	0	0			REV__ENST00000265970.11_1_11:17135933-17139054:-|nuORF	REV__ENST00000265970.11_1_11:17135933-17139054:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.79510498046875	2	497.795269	993.575986	-0.21329	-0.00010617	1.5343	0.00076377	1.321	0.0006576	497.7957318764316	48.396	0.83173	48.303	47.807	48.639	-0.093178					51	20	3	0	0	0	0.884	1	3664	3664		33.516	0	1	388480	+		60251	24501	40217	40233	68281	68281					0.0789407426799471
VANPNSAIF	9	Unmodified	_VANPNSAIF_					0	0	0		nc|ENSG00000106682|Q15056-2|EIF4H;ENSG00000106682|ENST00000265753|EIF4H	nc|ENSG00000106682|Q15056-2|EIF4H	nc|ENSG00000106682|Q15056-2|EIF4H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.74505615234375	2	466.745442	931.476331	-1.3986	-0.0006528	1.9313	0.00090145	0.53273	0.00024865	466.74607133171145	57.712	0.79199	58.106	57.819	58.611	0.39407					40	19	3	0	0	0	0.41566	1	6028	6028		56.721	1.9447	1	860290			60252	2312	40218	40234	68282	68282					0.007852118633763894
VAPDNLKQ	8	Unmodified	_VAPDNLKQ_					0	0	0		ENST00000510543.1_1_4:63683420-63684509:+|nuORF;ENST00000554011.5_1_14:57675329-57698504:-|nuORF;ENSG00000070367|ENST00000621441|EXOC5	ENST00000510543.1_1_4:63683420-63684509:+|nuORF	ENST00000510543.1_1_4:63683420-63684509:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7445373535156	2	442.745442	883.476331	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.863	1	91.333	90.833	91.833	0.47068								0	0	0	0.31091	1	10807	10807		47.916	7.343	1				60253	1238	40219	40235	68283	68283					0.029932118633723803
VAPHSRGLS	9	Unmodified	_VAPHSRGLS_					0	0	0			REV__ENSG00000178971|ENST00000651323|CTC1	REV__ENSG00000178971|ENST00000651323|CTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	462.25531005859375	2	462.256508	922.498464	-0.41541	-0.00019202	-1.2789	-0.00059118	-1.6943	-0.0007832	462.25572507259955	50.691	0.91424	50.599	50.35	51.265	-0.091797					43	26	2	0	0	0	0.69624	1	3999	3999		40.778	5.1599	1	292570	+		60254	22304	40220	40236	68284	68284					0.03411436331805362
VAPIKALR	8	Unmodified	_VAPIKALR_					0	0	0		ENSG00000185313|ENST00000449082|SCN10A	ENSG00000185313|ENST00000449082|SCN10A	ENSG00000185313|ENST00000449082|SCN10A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.2906799316406	2	434.292362	866.570172	0.17838	7.747E-05	0.048426	2.1031E-05	0.22681	9.8501E-05	434.292301495122	76.664	0.70924	77.064	76.616	77.325	0.3997					39	22	2	0	0	0	0.86288	1	8691	8691		26.796	1.3459	1	683460			60255	7701	40221	40237	68285	68285					0.13154975756310705
VAPILTYV	8	Unmodified	_VAPILTYV_					0	0	0			REV__ENST00000558394.5_1_15:77348162-77363449:-|nuORF	REV__ENST00000558394.5_1_15:77348162-77363449:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2641296386719	2	438.265479	874.516405	-1.9277	-0.00084486	-2.8186	-0.0012353	-4.7463	-0.0020801	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.87276	1	2446	2446		29.842	1.5873	1	3507500	+		60256	19610	40222	40238	68286	68286					0.07412758533939723
VAPIQRRKKPA	11	Unmodified	_VAPIQRRKKPA_					0	0	0		ENSG00000197265|ENST00000355904|GTF2E2	ENSG00000197265|ENST00000355904|GTF2E2	ENSG00000197265|ENST00000355904|GTF2E2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	422.2288513183594	3	421.938451	1262.79352	0.40815	0.00017221	0.99618	0.00042033	1.4043	0.00059254	421.9388369043775	64.639	0.19011	64.763	64.685	64.875	0.12396					6	5	2	0	0	0	0.18028	1	5706	5706		6.3209	0	1	69714			60257	8149	40223	40239	68287	68287					0.17263844470608092
VAPKCIVID	9	Unmodified	_VAPKCIVID_					0	0	0			REV__nc|ENSG00000138759|Q86XX4-4|FRAS1	REV__nc|ENSG00000138759|Q86XX4-4|FRAS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2743835449219	2	479.275521	956.536489	2.056	0.00098538	2.4377	0.0011683	4.4937	0.0021537	479.27658358696607	97.01	0.8148	97.415	96.969	97.784	0.40498					49	19	3	0	0	0	0.20789	1	11699	11699		20.947	9.4359	1	862190	+		60258	19502	40224	40240	68288	68288					0.05648186202233774
VAPPGKKC	8	Unmodified	_VAPPGKKC_					0	0	0		nc|ENSG00000102032|P51606-2|RENBP;nc|ENSG00000102032|P51606-3|RENBP;ENSG00000102032|ENST00000393700|RENBP	nc|ENSG00000102032|P51606-2|RENBP	nc|ENSG00000102032|P51606-2|RENBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2279052734375	2	400.228374	798.442194	1.122	0.00044908	-2.7095	-0.0010844	-1.5874	-0.00063533	400.22744040827075	52.487	1.5647	52.911	52.149	53.713	0.42348					74	37	3	0	0	0	0.86288	1	5315	5315		26.796	10.091	1	9430900			60259	1981	40225	40241	68289	68289					0.034910921707592024
VAPPILLEKPS	11	Unmodified	_VAPPILLEKPS_					0	0	0			REV__ENSG00000196531|ENST00000454682|NACA	REV__ENSG00000196531|ENST00000454682|NACA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3536376953125	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.72106	1	12320	12320		28.081	0.19925	1	3937500	+		60260	23140	40226	40242	68290	68290					0.12132017751082458
VAPPLQLL	8	Unmodified	_VAPPLQLL_					0	0	0			REV__ENSG00000205978|ENST00000382554|NYNRIN	REV__ENSG00000205978|ENST00000382554|NYNRIN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.2946472167969	2	425.773471	849.53239	0.47636	0.00020282	-1.7875	-0.00076108	-1.3112	-0.00055825	425.77472417656776	72.082	0.742	72.212	71.943	72.685	0.1301					34	23	2	0	0	0	0.4196	1	6568	6568		7.6903	0	1	62500	+		60261	23582	40227	40243	68291	68291					0.10160464770854105
VAPPLQLL	8	Unmodified	_VAPPLQLL_					0	0	0			REV__ENSG00000205978|ENST00000382554|NYNRIN	REV__ENSG00000205978|ENST00000382554|NYNRIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.77520751953125	2	425.773471	849.53239	0.52804	0.00022483	2.6288	0.0011193	3.1568	0.0013441	425.7745403369288	37.544	1.064	38.03	37.492	38.556	0.48581					97	26	5	0	0	0	0.80963	1	3081	3081		15.636	0	1	42348000	+		60262	23582	40227	40243	68292	68292					0.10160464770854105
VAPRACVQ	8	Unmodified	_VAPRACVQ_					0	0	0			REV__nc|ENSG00000160271|Q12967-5|RALGDS	REV__nc|ENSG00000160271|Q12967-5|RALGDS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.2277526855469	2	422.228905	842.443257	-1.0163	-0.00042911	-0.91112	-0.0003847	-1.9274	-0.00081381	422.2283841733275	63.841	0.75198	63.872	63.292	64.044	0.030247					57	33	3	0	0	0	0.85277	1	5608	5608		25.45	3.7478	1	211120	+		60263	29966	40228	40244	68293	68293					0.015733065396716484
VAPRGLQC	8	Unmodified	_VAPRGLQC_					0	0	0		ENST00000369905.8_1_10:104239102-104239270:-|nuORF	ENST00000369905.8_1_10:104239102-104239270:-|nuORF	ENST00000369905.8_1_10:104239102-104239270:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.22772216796875	2	422.228905	842.443257	-1.0391	-0.00043872	-1.0158	-0.00042889	-2.0548	-0.00086761	422.2283416890696	64.395	1.1539	64.425	64.021	65.175	0.030243					96	39	3	0	0	0	0.86791	1	5643	5643		28.254	1.4582	1	492400			60264	10630	40229	40245	68294	68294					0.015733065396716484
VAPVIKAR	8	Unmodified	_VAPVIKAR_					0	0	0		ENSG00000136750|ENST00000376261|GAD2	ENSG00000136750|ENST00000376261|GAD2	ENSG00000136750|ENST00000376261|GAD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.526123046875	2	427.284537	852.554522	-1.8117	-0.00077409	-1.6456	-0.00070313	-3.4572	-0.0014772	427.2851493317387	18.231	0.17262	18.275	18.203	18.375	0.044048					12	8	2	0	0	0	0.4196	1	311	311		12.959	5.7658	1	50842			60265	4134	40230	40246	68295	68295					0.12234689239267027
VAPVRDPP	8	Unmodified	_VAPVRDPP_					0	0	0			REV__ENST00000368797.8_1_10:127505070-127511780:-|nuORF	REV__ENST00000368797.8_1_10:127505070-127511780:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	426.2950439453125	2	425.742702	849.470852	0.18983	8.082E-05	-0.10412	-4.4329E-05	0.085711	3.6491E-05	425.7419955828706	74.008	0.5991	74.567	74.2	74.799	0.55891					31	13	4	0	0	0	0.4196	1	8383	8383		52.299	11.727	1	596830	+		60266	25605	40231	40247	68296	68296					0.040095330715644195
VAQALLLP	8	Unmodified	_VAQALLLP_					0	0	0		ENSG00000158292|ENST00000377893|GPR153	ENSG00000158292|ENST00000377893|GPR153	ENSG00000158292|ENST00000377893|GPR153	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7668762207031	2	412.765646	823.516739	-1.0958	-0.00045233	2.7086	0.001118	1.6128	0.0006657	412.76710496522145	44.033	1.9061	43.999	42.844	44.75	-0.03347					106	44	3	0	0	0	0.80963	1	3483	3483		15.636	0.97212	1	328990			60267	5470	40232	40248	68297	68297					0.09792178253792372
VAQEKNHAIKK	11	Unmodified	_VAQEKNHAIKK_					0	0	0		nc|ENSG00000138778|Q02224-3|CENPE;chr4:103163256-103174736|63|39.62|0.34|6.87|-|ENST00000380026|CENPE,CENPE;chr4:103138452-103140256|63|22.33|0.54|5.36|-|ENST00000380026|CENPE,CENPE;ENSG00000138778|ENST00000265148|CENPE	nc|ENSG00000138778|Q02224-3|CENPE	nc|ENSG00000138778|Q02224-3|CENPE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.367431640625	2	633.369861	1264.72517	0.88638	0.00056141	-2.1201	-0.0013428	-1.2337	-0.0007814	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.68532	1	9913	9913		33.922	4.7721	1	5166300			60268	411	40233	40249	68298	68298					0.10339555100040343
VAQLSRAQKKA	11	Unmodified	_VAQLSRAQKKA_					0	0	0			REV__ENSG00000184363|ENST00000331563|PKP3	REV__ENSG00000184363|ENST00000331563|PKP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.579833984375	3	400.578811	1198.7146	3.4037	0.0013634	1.0118	0.0004053	4.4155	0.0017688	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.74405	1	13640	13640		23.378	4.1152	1	5321000	+		60269	22668	40234	40250	68299	68299					0.12319572445653648
VAQQQDVHLTV	11	Unmodified	_VAQQQDVHLTV_					0	0	0		nc|ENSG00000168936|A0AVI4-2|TMEM129;ENSG00000168936|ENST00000382936|TMEM129	nc|ENSG00000168936|A0AVI4-2|TMEM129	nc|ENSG00000168936|A0AVI4-2|TMEM129	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2662658691406	3	413.222693	1236.64625	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.389	1	15.902	15.402	16.402	-0.48718								0	0	0	0.56276	1	124	124		33.039	1.4051	1				60270	6454	40235	40251	68300	68300					0.037392830751286965
VAQRVQRPPSA	11	Unmodified	_VAQRVQRPPSA_					0	0	0		ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188	ENSG00000095319|ENST00000372577|NUP188	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.8462524414062	2	604.846553	1207.67855	-0.095899	-5.8004E-05	-0.55361	-0.00033485	-0.64951	-0.00039285	604.846117051297	96.108	3.1148	96.155	95.25	98.365	0.047707					211	72	4	0	0	0	0.68532	1	10214	10214		33.922	5.8401	1	638500			60271	1721;14802	40236	40252	68301	68301					0.08302115268816124
VARARGRVF	9	Unmodified	_VARARGRVF_					0	0	0		ENST00000282516.12_2_5:36876878-36877172:+|nuORF	ENST00000282516.12_2_5:36876878-36877172:+|nuORF	ENST00000282516.12_2_5:36876878-36877172:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3134155273438	2	516.314692	1030.61483	3.1012	0.0016012	-4.4505	-0.0022979	-1.3494	-0.0006967	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.7932	1	13200	13200		25.45	2.4077	1	1162600			60272	9636	40237	40253	68302	68302					0.10074799622361752
VARARGRVF	9	Unmodified	_VARARGRVF_					0	0	0		ENST00000282516.12_2_5:36876878-36877172:+|nuORF	ENST00000282516.12_2_5:36876878-36877172:+|nuORF	ENST00000282516.12_2_5:36876878-36877172:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3135986328125	2	516.314692	1030.61483	-1.5619	-0.00080641	0.27971	0.00014442	-1.2821	-0.00066199	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	2	12215	12215;12616		26.796	1.3459	1	4038100			60273	9636	40237	40253	68303;68304	68303					0.10074799622361752
VARASDVCF	9	Unmodified	_VARASDVCF_					0	0	0			REV__ENSG00000085365|ENST00000621999|SCAMP1	REV__ENSG00000085365|ENST00000621999|SCAMP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.236083984375	2	484.236927	966.459301	-1.6458	-0.00079696	0.11035	5.3435E-05	-1.5355	-0.00074352	484.2369070746642	87.276	1.0738	87.441	87.216	88.289	0.16473					45	24	2	0	0	0	0.47272	1	8561	8561		53.351	0	1	1275000	+		60274	16887	40238	40254	68305	68305					-0.025270320140862168
VAREIRKPNTV	11	Unmodified	_VAREIRKPNTV_					0	0	0			REV__nc|ENSG00000111674|P09104-2|ENO2	REV__nc|ENSG00000111674|P09104-2|ENO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8825073242188	2	641.883136	1281.75172	1.6823	0.0010798	-2.7332	-0.0017544	-1.051	-0.00067461	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.74763	1	10568	10568		22.58	3.4761	1	3772700	+		60275	17885	40239	40255	68306	68306					0.12211243991396259
VARERDVL	8	Unmodified	_VARERDVL_					0	0	0			REV__ENST00000546704.1_1_12:57868176-57868820:-|nuORF	REV__ENST00000546704.1_1_12:57868176-57868820:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2784118652344	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.90523	1	10102	10102		40.778	3.6191	1	5642300	+		60276	18535	40240	40256	68307	68307					0.06031992020314192
VARFGRIG	8	Unmodified	_VARFGRIG_					0	0	0		chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.26336669921875	2	438.264136	874.51372	-1.9277	-0.00084486	0.24503	0.00010739	-1.6827	-0.00073747	438.26426788120006	36.276	4.4983	36.276	36.008	40.506	0					294	109	4	0	0	0	0.884	2	2082	2082;2357		37.159	1.9584	1	3507500			60277	139	40241	40257	68308;68309	68308					0.07144347919654592
VARFGRIG	8	Unmodified	_VARFGRIG_					0	0	0		chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26336669921875	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.90465	1	2463	2463		40.573	5.3719	1	3673500			60278	139	40241	40257	68310	68310					0.07144347919654592
VARFGRIG	8	Unmodified	_VARFGRIG_					0	0	0		chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2630310058594	2	438.264136	874.51372	0.23628	0.00010355	-2.5171	-0.0011032	-2.2808	-0.00099961	438.2630000772303	41.447	4.9318	41.416	41.067	45.999	-0.030991					252	119	4	0	0	0	0.884	1	3146	3146		33.516	1.5607	1	5350400			60279	139	40241	40257	68311	68311					0.07144347919654592
VARFGRIG	8	Unmodified	_VARFGRIG_					0	0	0		chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2633972167969	2	438.264136	874.51372	-0.25936	-0.00011367	-1.4504	-0.00063564	-1.7097	-0.00074931	438.2635036922713	37.509	3.6918	37.521	37.15	40.842	0.011173					225	87	5	0	0	0	0.90465	1	2606	2606		40.573	5.3719	1	2361100			60280	139	40241	40257	68312	68312					0.07144347919654592
VARFGRIG	8	Unmodified	_VARFGRIG_					0	0	0		chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.261962890625	2	438.264136	874.51372	0.037237	1.632E-05	-1.83	-0.00080201	-1.7927	-0.00078569	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.85277	1	2139	2139		25.45	1.2474	1	10667000			60281	139	40241	40257	68313	68313					0.07144347919654592
VARFGRIG	8	Unmodified	_VARFGRIG_					0	0	0		chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2630920410156	2	438.264136	874.51372	-1.2747	-0.00055866	-2.1943	-0.00096169	-3.469	-0.0015203	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.91977	1	3805	3805		45.952	10.334	1	219150000			60282	139	40241	40257	68314	68314					0.07144347919654592
VARFGRIGR	9	Unmodified	_VARFGRIGR_					0	0	0		chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	chr12:6534569-6536494|17|54.94|0.78|6.14|+|1|GAPDH,GAPDH|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3121948242188	2	516.314692	1030.61483	0.65847	0.00033998	-2.1551	-0.0011127	-1.4966	-0.00077273	516.3134870113196	32.951	1.4307	33.121	32.721	34.151	0.16971					82	33	3	0	0	0	0.74721	1	2327	2327		37.159	8.0096	1	426400			60283	139	40242	40258	68315	68315					0.10074799622361752
VARIQAPG	8	Unmodified	_VARIQAPG_					0	0	0			REV__ENSG00000108784|ENST00000225927|NAGLU	REV__ENSG00000108784|ENST00000225927|NAGLU	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2431945800781	2	406.24287	810.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.243	1	25.344	24.844	25.844	0.10045								0	0	0	0.30125	1	904	904		20.482	0	1		+		60284	17730	40243	40259	68316	68316					0.058369527914123864
VARKLDHYLE	10	Unmodified	_VARKLDHYLE_					0	0	0		ENSG00000140015|ENST00000322893|KCNH5;ENST00000394964.3_1_14:63416779-63568536:-|nuORF;nc|ENSG00000140015|Q8NCM2-2|KCNH5;nc|ENSG00000140015|Q8NCM2-3|KCNH5	ENSG00000140015|ENST00000322893|KCNH5	ENSG00000140015|ENST00000322893|KCNH5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.3460083007812	2	622.343312	1242.67207	2.2592	0.001406	2.6326	0.0016384	4.8919	0.0030444	622.3450020425241	96.156	1.7473	96.1	95.227	96.974	-0.056381					109	40	3	0	0	0	0.8651	1	10303	10303		25.574	0	1	421260			60285	4410	40244	40260	68317	68317					0.06044177317380672
VARKSAPATG	10	Unmodified	_VARKSAPATG_					0	0	0		ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2773742675781	2	479.277441	956.540328	-0.098244	-4.7086E-05	0.019792	9.4859E-06	-0.078452	-3.76E-05	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.85981	1	8693	8693		35.152	0	1	6799600			60286	6377	40245	40261	68318	68318					0.060319920203255606
VARKSAPATG	10	Unmodified	_VARKSAPATG_					0	0	0		ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27789306640625	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.8545	1	8780	8780		36.447	4.4919	1	7040000			60287	6377	40245	40261	68319	68319					0.060319920203255606
VARKSAPATG	10	Unmodified	_VARKSAPATG_					0	0	0		ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.27813720703125	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.8545	1	8301	8301		36.447	1.2947	1	6441000			60288	6377	40245	40261	68320	68320					0.060319920203255606
VARKSAPATG	10	Unmodified	_VARKSAPATG_					0	0	0		ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2774353027344	2	479.277441	956.540328	0.29447	0.00014113	-0.081575	-3.9097E-05	0.21289	0.00010203	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.49268	5	9992	9621;9836;9847;9979;9992		56.434	8.7579	1	5642300			60289	6377	40245	40261	68321;68322;68323;68324;68325	68325					0.060319920203255606
VARKSAPATG	10	Unmodified	_VARKSAPATG_					0	0	0		ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	ENSG00000168148|ENST00000366696|H3-4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2802429199219	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.63899	4	9880	9880;10012;10050;10075		47.96	6.5329	1	6350300			60290	6377	40245	40261	68326;68327;68328;68329	68326					0.060319920203255606
VARLRREH	8	Unmodified	_VARLRREH_					0	0	0			REV__nc|ENSG00000240403|P43630-2|KIR3DL2	REV__nc|ENSG00000240403|P43630-2|KIR3DL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	518.8109741210938	2	518.809774	1035.60499	-1.5537	-0.00080609	2.6576	0.0013788	1.1039	0.00057271	518.8109778713948	100.39	1.4071	100.56	99.928	101.34	0.172					74	32	4	0	0	0	0.89494	1	10417	10417		37.159	1.5408	1	1482900	+		60291	23811	40246	40262	68330	68330					0.08861611616976006
VARLRREH	8	Unmodified	_VARLRREH_					0	0	0			REV__nc|ENSG00000240403|P43630-2|KIR3DL2	REV__nc|ENSG00000240403|P43630-2|KIR3DL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8110961914062	2	518.809774	1035.60499	2.0333	0.0010549	-0.97117	-0.00050385	1.0622	0.00055106	518.8092333336378	100.03	1.6601	100.36	99.811	101.47	0.33295					136	41	4	0	0	0	0.9295	3	12059	12059;12070;12106		55.504	5.4797	1	17274000	+		60292	23811	40246	40262	68331;68332;68333	68331					0.08861611616976006
VARLRREH	8	Unmodified	_VARLRREH_					0	0	0			REV__nc|ENSG00000240403|P43630-2|KIR3DL2	REV__nc|ENSG00000240403|P43630-2|KIR3DL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8103637695312	2	518.809774	1035.60499	1.249	0.000648	-0.31641	-0.00016415	0.9326	0.00048384	518.8096033734023	97.807	0.8631	98.198	97.641	98.504	0.39065					64	20	5	0	0	0	0.93293	1	11804	11804		51.335	3.6781	1	3689300	+		60293	23811	40246	40262	68334	68334					0.08861611616976006
VARLRREH	8	Unmodified	_VARLRREH_					0	0	0			REV__nc|ENSG00000240403|P43630-2|KIR3DL2	REV__nc|ENSG00000240403|P43630-2|KIR3DL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8103637695312	2	518.809774	1035.60499	1.4869	0.00077141	-0.58293	-0.00030243	0.90395	0.00046898	518.8094559796755	98.41	1.4425	98.787	98.408	99.851	0.37679					96	35	4	0	0	0	0.93293	1	11898	11898		51.335	1.8939	1	12414000	+		60294	23811	40246	40262	68335	68335					0.08861611616976006
VARLRREH	8	Unmodified	_VARLRREH_					0	0	0			REV__nc|ENSG00000240403|P43630-2|KIR3DL2	REV__nc|ENSG00000240403|P43630-2|KIR3DL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8110961914062	2	518.809774	1035.60499	2.0617	0.0010696	-1.0619	-0.00055092	0.99976	0.00051869	518.8091991124401	100.03	1.7649	100.37	99.779	101.54	0.34591					151	44	5	0	0	0	0.72312	4	12150	12115;12126;12150;12175		66.429	15.094	1	18229000	+		60295	23811	40246	40262	68336;68337;68338;68339	68338					0.08861611616976006
VARLSREN	8	Unmodified	_VARLSREN_					0	0	0		chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1	chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1	chr3:13164133-13282711|39|12.36|0.0|20.24|-|ENST00000648114|IQSEC1,IQSEC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7666320800781	2	472.76724	943.519927	0.62555	0.00029574	-0.6042	-0.00028565	0.02135	1.0094E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.84579	1	8075	8075		24.519	0	1	508030			60296	389	40247	40263	68340	68340					0.045908213605116543
VARMKPILSVK	11	Unmodified	_VARMKPILSVK_					0	0	0			REV__ENST00000465670.1_1_7:2418302-2418434:+|nuORF	REV__ENST00000465670.1_1_7:2418302-2418434:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	621.3933715820312	2	621.391751	1240.76895	1.3	0.00080781	0.25772	0.00016015	1.5577	0.00096796	621.391799087684	104.31	3.5019	104.48	103.97	107.47	0.17096					300	87	5	0	0	0	0.6921	1	11397	11397		32.812	7.2384	1	23079000	+		60297	27113	40248	40264	68341	68341					0.15819448272850423
VARNVALGN	9	Unmodified	_VARNVALGN_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;ENST00000561199.5_1_14:24652794-24657993:-|nuORF;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2620849609375	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.78058	1	7403	7403		30.504	1.3541	1	1032000			60298	8063	40249	40265	68342	68342					0.054357228488470355
VARPWLTP	8	Unmodified	_VARPWLTP_					0	0	0		ENSG00000083457|ENST00000263087|ITGAE	ENSG00000083457|ENST00000263087|ITGAE	ENSG00000083457|ENST00000263087|ITGAE	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.2721862792969	2	470.27417	938.533787	-1.0259	-0.00048243	-3.3077	-0.0015555	-4.3335	-0.0020379	470.27263416214146	92.531	3.2683	92.531	91.425	94.693	0					153	75	5	0	0	0	0.884	1	9114	9114		33.516	8.0654	1	1224900			60299	1500	40250	40266	68343	68343					0.06206098859604481
VARPWLTP	8	Unmodified	_VARPWLTP_					0	0	0		ENSG00000083457|ENST00000263087|ITGAE	ENSG00000083457|ENST00000263087|ITGAE	ENSG00000083457|ENST00000263087|ITGAE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.271240234375	2	470.27417	938.533787	-1.3301	-0.00062551	-2.93	-0.0013779	-4.2601	-0.0020034	470.27272461569635	91.968	1.6857	92.431	92.02	93.705	0.46249					82	39	3	0	0	0	0.86791	1	10992	10992		28.254	2.8041	1	881790			60300	1500	40250	40266	68344	68344					0.06206098859604481
VARPWSPWL	9	Unmodified	_VARPWSPWL_					0	0	0		ENST00000595288.5_1_19:7690973-7692503:-|nuORF	ENST00000595288.5_1_19:7690973-7692503:-|nuORF	ENST00000595288.5_1_19:7690973-7692503:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	556.3070068359375	2	556.306001	1110.59745	-0.59896	-0.0003332	4.3488	0.0024193	3.7499	0.0020861	556.3083395239671	90.786	3.2927	90.786	89.515	92.808	0					144	76	2	0	0	0	0.76255	1	8830	8830		35.618	0.46626	1	416120			60301	14328	40251	40267	68345	68345					0.04657459296709021
VARRAGAVHTL	11	Unmodified	_VARRAGAVHTL_					0	0	0		ENSG00000112787|ENST00000680143|FBRSL1	ENSG00000112787|ENST00000680143|FBRSL1	ENSG00000112787|ENST00000680143|FBRSL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.842529296875	2	575.843813	1149.67307	0.80402	0.00046299	-2.4364	-0.001403	-1.6324	-0.00094001	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.62614	1	9231	9231		41.427	2.6205	1	6947200			60302	2681	40252	40268	68346	68346					0.10422436476983421
VARRSRRGRP	10	Unmodified	_VARRSRRGRP_					0	0	0			REV__ENSG00000133124|ENST00000372129|IRS4	REV__ENSG00000133124|ENST00000372129|IRS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	605.8722534179688	2	605.871228	1209.7279	-0.46872	-0.00028398	1.8871	0.0011433	1.4184	0.00085936	605.8722201329331	100.48	2.0532	100.52	100	102.06	0.039742					113	47	4	0	0	0	0.82886	1	10726	10726		37.812	11.119	1	1745000	+		60303	19062	40253	40269	68347	68347					0.13142868068257485
VARRSRRGRP	10	Unmodified	_VARRSRRGRP_					0	0	0			REV__ENSG00000133124|ENST00000372129|IRS4	REV__ENSG00000133124|ENST00000372129|IRS4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.8729248046875	2	605.871228	1209.7279	1.0692	0.00064779	0.39195	0.00023747	1.4611	0.00088526	605.8712819289403	100.09	1.5113	100.3	99.817	101.33	0.21512					93	35	4	0	0	0	0.86587	1	10421	10421		29.17	4.9673	1	798340	+		60304	19062	40253	40269	68348	68348					0.13142868068257485
VARRVADN	8	Unmodified	_VARRVADN_					0	0	0			REV__ENSG00000111713|ENST00000261195|GYS2	REV__ENSG00000111713|ENST00000261195|GYS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7536926269531	2	450.754133	899.493713	-1.5537	-0.00070033	1.6807	0.0007576	0.12705	5.7268E-05	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.87922	1	7746	7746		31.955	0	1	298090	+		60305	17891	40254	40270	68349	68349					0.03994552189033129
VARRYPNLFTN	11	Unmodified	_VARRYPNLFTN_					0	0	0		ENSG00000185522|ENST00000329451|LMNTD2	ENSG00000185522|ENST00000329451|LMNTD2	ENSG00000185522|ENST00000329451|LMNTD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.91400146484375	3	450.914083	1349.72042	-0.021773	-9.8178E-06	0.25524	0.00011509	0.23347	0.00010527	450.91399860095873	37.082	0.8468	37.058	36.726	37.573	-0.023975					39	18	4	0	0	0	0.70584	1	2417	2417		30.569	0.25114	1	122500			60306	7721	40255	40271	68350	68350					0.059546709572941836
VARSRPTAS	9	Unmodified	_VARSRPTAS_					0	0	0		ENST00000308527.5_1_15:75940609-75940792:+|nuORF	ENST00000308527.5_1_15:75940609-75940792:+|nuORF	ENST00000308527.5_1_15:75940609-75940792:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.76727294921875	2	472.76724	943.519927	0.74188	0.00035074	-0.67971	-0.00032134	0.06217	2.9392E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.67345	1	8665	8665		42.396	0	1	547170			60307	9890	40256	40272	68351	68351					0.04590821360523023
VARVGLALL	9	Unmodified	_VARVGLALL_					0	0	0			REV__ENSG00000169894|ENST00000379458|MUC3A	REV__ENSG00000169894|ENST00000379458|MUC3A	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30010986328125	2	456.30547	910.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.822	1	21.762	21.262	22.262	-0.059492								0	0	0	0.31088	1	662	662		26.796	2.5934	1		+		60308	21613	40257	40273	68352	68352					0.137512449278006
VARVGRPG	8	Unmodified	_VARVGRPG_					0	0	0		ENST00000462681.1_1_3:52555898-52556306:+|nuORF	ENST00000462681.1_1_3:52555898-52556306:+|nuORF	ENST00000462681.1_1_3:52555898-52556306:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2489929199219	2	406.248486	810.48242	2.7178	0.0011041	-2.1477	-0.00087251	0.57008	0.0002316	406.24748869064086	111.72	0.8214	111.69	111.25	112.07	-0.025414					71	31	3	0	0	0	0.81548	1	12368	12368		20.482	0	1	80466			60309	12047	40258	40274	68353	68353					0.06959774885558545
VARVPEARLLG	11	Unmodified	_VARVPEARLLG_					0	0	0		ENSG00000185915|ENST00000379499|KLHL34	ENSG00000185915|ENST00000379499|KLHL34	ENSG00000185915|ENST00000379499|KLHL34	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8667602539062	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.51007	1	11372	11372		51.193	1.6567	1	52150000			60310	7755	40259	40275	68354	68354					0.12612473933995716
VARVVVWE	8	Unmodified	_VARVVVWE_					0	0	0		ENSG00000135144|ENST00000548759|DTX1	ENSG00000135144|ENST00000548759|DTX1	ENSG00000135144|ENST00000548759|DTX1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27764892578125	2	479.279452	956.544351	-1.1288	-0.000541	-3.1146	-0.0014928	-4.2434	-0.0020338	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.85277	1	7681	7681		25.45	1.2474	1	1311100			60311	3989	40260	40276	68355	68355					0.0643408151404401
VASARPLHLR	10	Unmodified	_VASARPLHLR_					0	0	0			REV__ENSG00000103319|ENST00000263026|EEF2K	REV__ENSG00000103319|ENST00000263026|EEF2K	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3414916992188	2	560.340907	1118.66726	3.1454	0.0017625	-4.1604	-0.0023312	-1.015	-0.00056875	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.77314	1	13222	13222		40.778	17.736	1	151040	+		60312	17403	40261	40277	68356	68356					0.11267337965296065
VASEQTPAR	9	Unmodified	_VASEQTPAR_					0	0	0			REV__ENST00000579009.1_1_17:16842863-16843217:-|nuORF	REV__ENST00000579009.1_1_17:16842863-16843217:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.751220703125	2	479.751256	957.487959	0.1967	9.4366E-05	0.33496	0.0001607	0.53166	0.00025506	479.7511384255675	31.142	0.66008	31.16	30.879	31.539	0.01836					33	16	3	0	0	0	0.7932	1	1674	1674		26.693	1.1189	1	158910	+		60313	23812	40262	40278	68357	68357					0.007514088867083046
VASEQTPAR	9	Unmodified	_VASEQTPAR_					0	0	0			REV__ENST00000579009.1_1_17:16842863-16843217:-|nuORF	REV__ENST00000579009.1_1_17:16842863-16843217:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.7510681152344	2	479.751256	957.487959	-0.23225	-0.00011142	0.21564	0.00010346	-0.016608	-7.9676E-06	479.75127670684145	31.252	0.69834	31.201	30.869	31.567	-0.051031					31	16	3	0	0	0	0.44421	1	1766	1766		54.776	0	1	201830	+		60314	23812	40262	40278	68358	68358					0.007514088867083046
VASFIETKLV	10	Unmodified	_VASFIETKLV_					0	0	0		ENSG00000144962|ENST00000351008|SPATA16	ENSG00000144962|ENST00000351008|SPATA16	ENSG00000144962|ENST00000351008|SPATA16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8302612304688	2	553.826432	1105.63831	3.3341	0.0018465	3.5614	0.0019724	6.8955	0.0038189	553.8282134205963	102.58	0.81242	102.53	102.22	103.03	-0.047005					43	19	3	0	0	0	0.86589	1	11208	11208		29.15	2.4566	1	563570			60315	4745	40263	40279	68359	68359					0.08971755825655237
VASFNRKHSR	10	Unmodified	_VASFNRKHSR_					0	0	0			REV__chr1:16978314-16981514|23|84.74|0.2|8.74|-|2|TE_info:L2b,L2b_dup748,L2,LINE,donor,+,16981514,16981567|MFAP2,None|1	REV__chr1:16978314-16981514|23|84.74|0.2|8.74|-|2|TE_info:L2b,L2b_dup748,L2,LINE,donor,+,16981514,16981567|MFAP2,None|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.8589477539062	2	601.33107	1200.64759	3.2462	0.0019521	-0.48164	-0.00028962	2.7646	0.0016624	601.3307379449948	103.61	1.2011	103.57	103.25	104.45	-0.043755					36	28	2	0	0	0	0.37624	1	11454	11454		36.447	0	1	202990	+		60316	15426	40264	40280	68360	68360					0.055289619545419555
VASGAEDPP	9	Unmodified	_VASGAEDPP_					0	0	0		ENST00000574967.5_2_17:78194749-78195313:+|nuORF;ENST00000572652.5_1_17:78194749-78195028:+|nuORF;ENST00000361193.7_2_17:78194749-78195568:+|nuORF	ENST00000574967.5_2_17:78194749-78195313:+|nuORF	ENST00000574967.5_2_17:78194749-78195313:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.697998046875	2	421.698158	841.381762	-0.18181	-7.6669E-05	1.0531	0.00044407	0.87125	0.00036741	421.69834318779186	58.402	0.61375	58.389	58.04	58.654	-0.013641					29	19	2	0	0	0	0.77546	1	5303	5303		31.955	8.9124	1	93540			60317	10468	40265	40281	68361	68361					-0.0452734667861705
VASHVYTK	8	Unmodified	_VASHVYTK_					0	0	0			REV__nc|ENSG00000187010|Q02161-3|RHD	REV__nc|ENSG00000187010|Q02161-3|RHD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.8815002441406	2	452.747985	903.481417	-0.12933	-5.8553E-05	0.041548	1.8811E-05	-0.087781	-3.9743E-05	452.7478399928879	18.842	0.28085	18.365	18.171	18.451	-0.47694					9	5	2	0	0	0	0.4196	1	439	439		35.618	0	1	61732	+		60318	22894	40266	40282	68362	68362					0.02581515726001271
VASLEEVP	8	Unmodified	_VASLEEVP_					0	0	0		nc|ENSG00000123815|Q96D53-2|COQ8B;ENSG00000123815|ENST00000324464|COQ8B	nc|ENSG00000123815|Q96D53-2|COQ8B	nc|ENSG00000123815|Q96D53-2|COQ8B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.22802734375	2	422.226551	842.438549	-0.30034	-0.00012681	3.9543	0.0016696	3.654	0.0015428	422.22807899048587	64.416	1.0603	64.382	64.026	65.086	-0.034248					75	29	3	0	0	0	0.86791	1	6110	6110		28.254	0	1	581950			60319	3290	40267	40283	68363	68363					0.011027008779137759
VASLGNQKEPL	11	Unmodified	_VASLGNQKEPL_					0	0	0			REV__ENSG00000163930|ENST00000460680|BAP1	REV__ENSG00000163930|ENST00000460680|BAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3211059570312	2	578.322045	1154.62954	-0.45444	-0.00026281	-1.7369	-0.0010045	-2.1913	-0.0012673	578.3212868289457	92.787	2.7225	92.787	91.761	94.484	0					150	62	3	0	0	0	0.72106	1	9106	9106		28.081	0	1	310260	+		60320	20998	40268	40284	68364	68364					0.058407821891933054
VASLLGPLRRR	11	Unmodified	_VASLLGPLRRR_					0	0	0		nc|ENSG00000100100|Q96FE7-2|PIK3IP1	nc|ENSG00000100100|Q96FE7-2|PIK3IP1	nc|ENSG00000100100|Q96FE7-2|PIK3IP1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2679138183594	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.155	1	47.194	46.694	47.694	0.038181								0	0	0	0.56276	1	3512	3512		23.378	2.5408	1				60321	14806	40269	40285	68365	68365					0.1689555795353499
VASLMEVAIL	10	Unmodified	_VASLMEVAIL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.301736	1044.58892	-0.83282	-0.00043582	4.2992	0.0022498	3.4663	0.0018139	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.86589	1	8394	8394		29.15	1.0681	1	2778600	+		60322	19958	40270	40286	68366	68366					0.06840724545213561
VASLMEVAIL	10	Unmodified	_VASLMEVAIL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3032836914062	2	523.301736	1044.58892	-0.041394	-2.1661E-05	3.4629	0.0018121	3.4215	0.0017905	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.74274	1	8625	8625		42.396	6.7778	1	3850300	+		60323	19958	40270	40286	68367	68367					0.06840724545213561
VASLMEVAIL	10	Unmodified	_VASLMEVAIL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.301736	1044.58892	-0.041207	-2.1563E-05	3.5312	0.0018479	3.49	0.0018263	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.67608	2	9141	9141;9262		45.952	7.1458	1	12431000	+		60324	19958	40270	40286	68368;68369	68368					0.06840724545213561
VASLMEVAIL	10	Unmodified	_VASLMEVAIL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3034057617188	2	523.301736	1044.58892	1.699	0.00088911	1.7632	0.00092271	3.4623	0.0018118	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.84112	3	9292	9232;9292;9679		37.159	2.9866	1	13080000	+		60325	19958	40270	40286	68370;68371;68372	68371					0.06840724545213561
VASLMEVAIL	10	Unmodified	_VASLMEVAIL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.301736	1044.58892	1.1688	0.00061163	2.3066	0.0012071	3.4754	0.0018187	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.86589	1	9073	9073		29.15	2.4566	1	12580000	+		60326	19958	40270	40286	68373	68373					0.06840724545213561
VASLMEVAIL	10	Unmodified	_VASLMEVAIL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3035278320312	2	523.301736	1044.58892	1.1935	0.00062456	2.3787	0.0012448	3.5722	0.0018693	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.74274	1	10285	10285		42.396	1.618	1	11944000	+		60327	19958	40270	40286	68374	68374					0.06840724545213561
VASRATPAP	9	Unmodified	_VASRATPAP_					0	0	0		ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2459716796875	2	435.245609	868.476666	-1.0875	-0.00047334	1.0568	0.00045997	-0.030712	-1.3367E-05	435.24592093978197	47.407	1.4414	47.878	47.432	48.873	0.47139					84	35	4	0	0	0	0.6204	1	4538	4538		45.972	0.020292	1	7743100			60328	5236	40271	40287	68375	68375					0.037166315832337204
VASRELKNGF	10	Unmodified	_VASRELKNGF_					0	0	0		nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;ENSG00000061273|ENST00000080059|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-10|HDAC7	nc|ENSG00000061273|Q8WUI4-3|HDAC7	nc|ENSG00000061273|Q8WUI4-3|HDAC7	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.816162109375	2	560.809105	1119.60366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.137	1	71.213	70.713	71.713	0.076225								0	0	0	0.45132	1	6446	6446		30.318	1.1682	1				60329	1072	40272	40288	68376	68376					0.04863932737566756
VASSPAAMHP	10	Unmodified	_VASSPAAMHP_					0	0	0		ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.2362365722656	2	484.236927	966.459301	-0.09072	-4.393E-05	-1.405	-0.00068037	-1.4958	-0.0007243	484.23621822802284	87.004	0.94917	87.072	86.495	87.444	0.067444					68	21	4	0	0	0	0.6398	1	8800	8800		47.916	0	1	2724000			60330	5162	40273	40289	68377	68377					-0.025270320140862168
VASSPAAMHP	10	Unmodified	_VASSPAAMHP_					0	0	0		ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.2359619140625	2	484.236927	966.459301	-1.0498	-0.00050838	-0.56064	-0.00027148	-1.6105	-0.00077986	484.23660719413385	85.163	0.60972	85.223	84.849	85.459	0.05912					43	13	4	0	0	0	0.84112	1	8647	8647		37.159	5.2042	1	1253500			60331	5162	40273	40289	68378	68378					-0.025270320140862168
VASSPAAMHP	10	Unmodified	_VASSPAAMHP_					0	0	0		ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	484.236083984375	2	484.236927	966.459301	-0.89294	-0.0004324	-0.30233	-0.0001464	-1.1953	-0.00057879	484.2366259206153	87.452	2.1452	87.505	87.299	89.444	0.053032					79	50	3	0	0	0	0.86482	1	8960	8960		25.45	0	1	748930			60332	5162	40273	40289	68379	68379					-0.025270320140862168
VASSPAAMHP	10	Unmodified	_VASSPAAMHP_					0	0	0		ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.23602294921875	2	484.236927	966.459301	-1.5617	-0.00075625	-0.159	-7.6996E-05	-1.7207	-0.00083324	484.2368161920654	85.001	0.56653	85.15	84.753	85.32	0.14952					43	12	4	0	0	0	0.60083	1	8272	8272		50.025	7.5501	1	1708900			60333	5162	40273	40289	68380	68380					-0.025270320140862168
VATARHAAS	9	Unmodified	_VATARHAAS_					0	0	0			REV__ENST00000494437.1_1_1:11805926-11806319:+|nuORF	REV__ENST00000494437.1_1_1:11805926-11806319:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2412414550781	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.73802	1	7426	7426		37.812	0.65241	1	1219900	+		60334	27718	40274	40290	68381	68381					0.021228632976999506
VATLLSVPL	9	Unmodified	_VATLLSVPL_					0	0	0			REV__ENSG00000257008|ENST00000582579|GPR142	REV__ENSG00000257008|ENST00000582579|GPR142	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7931823730469	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.7932	1	1961	1961		19.36	0	1	3484100	+		60335	23914	40275	40291	68382	68382					0.10984716596760791
VATQALTVRHI	11	Unmodified	_VATQALTVRHI_					0	0	0			REV__nc|ENSG00000164347|Q969S9-5|GFM2	REV__nc|ENSG00000164347|Q969S9-5|GFM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.8585815429688	2	604.859129	1207.70371	0.044967	2.7199E-05	-0.8945	-0.00054104	-0.84953	-0.00051385	604.8584867584212	80.792	1.0733	81.319	80.907	81.98	0.52676					69	21	4	0	0	0	0.30449	1	9328	9328		56.434	12.057	1	4362400	+		60336	21075	40276	40292	68383	68383					0.10816170071370834
VATVLVKSYI	10	Unmodified	_VATVLVKSYI_					0	0	0			REV__ENSG00000101188|ENST00000370501|NTSR1	REV__ENSG00000101188|ENST00000370501|NTSR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.8406372070312	2	546.8368	1091.65905	2.1574	0.0011797	3.8395	0.0020996	5.9968	0.0032793	546.8389195845251	100.66	2.5347	101.01	100.49	103.03	0.3459					168	64	5	0	0	0	0.8608	1	12247	12247		34.173	3.6689	1	10074000	+		60337	17249	40277	40293	68384	68384					0.11688346205323796
VATVSEKSRI	10	Unmodified	_VATVSEKSRI_					0	0	0		nc|ENSG00000130779|P30622-2|CLIP1;nc|ENSG00000130779|P30622-1|CLIP1;ENSG00000130779|ENST00000620786|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3165893554688	2	545.316763	1088.61897	1.2602	0.00068721	-1.6244	-0.00088579	-0.36416	-0.00019858	545.3157252215916	93.374	2.1704	93.419	93.078	95.248	0.045448					107	51	4	0	0	0	0.85981	1	9788	9788		35.152	2.3396	1	955570			60338	3684	40278	40294	68385	68385					0.07820799534783873
VATVSEKSRI	10	Unmodified	_VATVSEKSRI_					0	0	0		nc|ENSG00000130779|P30622-2|CLIP1;nc|ENSG00000130779|P30622-1|CLIP1;ENSG00000130779|ENST00000620786|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167114257812	2	545.316763	1088.61897	0.15103	8.2357E-05	-0.42604	-0.00023233	-0.27501	-0.00014997	545.3163895621778	88.406	2.9505	88.613	86.649	89.6	0.20731					239	69	4	0	0	0	0.85981	1	8831	8831		35.152	3.6222	1	5755000			60339	3684	40278	40294	68386	68386					0.07820799534783873
VATVSEKSRI	10	Unmodified	_VATVSEKSRI_					0	0	0		nc|ENSG00000130779|P30622-2|CLIP1;nc|ENSG00000130779|P30622-1|CLIP1;ENSG00000130779|ENST00000620786|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3170776367188	2	545.316763	1088.61897	0.15577	8.4944E-05	-0.048112	-2.6236E-05	0.10766	5.8708E-05	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.82886	1	9106	9106		37.812	2.6595	1	17220000			60340	3684	40278	40294	68387	68387					0.07820799534783873
VATVSEKSRI	10	Unmodified	_VATVSEKSRI_					0	0	0		nc|ENSG00000130779|P30622-2|CLIP1;nc|ENSG00000130779|P30622-1|CLIP1;ENSG00000130779|ENST00000620786|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	nc|ENSG00000130779|P30622-2|CLIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	545.3167114257812	2	545.316763	1088.61897	-1.4651	-0.00079892	1.2838	0.00070007	-0.18127	-9.8847E-05	545.3173287858774	88.377	2.9868	88.548	86.615	89.602	0.17171					257	69	4	0	0	0	0.86471	1	8746	8746		30.318	1.1682	1	4998200			60341	3684	40278	40294	68388	68388					0.07820799534783873
VAVDEAGPGGP	11	Unmodified	_VAVDEAGPGGP_					0	0	0			REV__ENSG00000105429|ENST00000251268|MEGF8	REV__ENSG00000105429|ENST00000251268|MEGF8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.73809814453125	2	484.737814	967.461075	-1.112	-0.00053904	-1.06	-0.00051381	-2.172	-0.0010529	484.73703083029454	91.738	1.4062	92.2	91.723	93.13	0.46249					52	32	2	0	0	0	0.61774	1	10969	10969		42.396	0	1	257830	+		60342	17539	40279	40295	68389	68389					-0.023956997244681588
VAVDEAGPGGP	11	Unmodified	_VAVDEAGPGGP_					0	0	0			REV__ENSG00000105429|ENST00000251268|MEGF8	REV__ENSG00000105429|ENST00000251268|MEGF8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	484.737814	967.461075	1.299	0.00062969	-3.611	-0.0017504	-2.3119	-0.0011207	484.7358452601465	91.684	1.4027	92.133	91.547	92.95	0.44958	-0.033429	-0.00086259	NaN	42.396	55	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	313580	+		60343	17539	40279	40295							-0.023956997244681588
VAVDEAGPGGP	11	Unmodified	_VAVDEAGPGGP_					0	0	0			REV__ENSG00000105429|ENST00000251268|MEGF8	REV__ENSG00000105429|ENST00000251268|MEGF8	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	484.737814	967.461075	-1.112	-0.00053904	-1.06	-0.00051381	-2.172	-0.0010529	484.73703083029454	91.738	1.4062	92.2	91.723	93.13	0.46249	0.033429	0.0016105	NaN	42.396	52	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	257830	+		60344	17539	40279	40295							-0.023956997244681588
VAVDILIAV	9	Unmodified	_VAVDILIAV_					0	0	0		ENSG00000127324|ENST00000247829|TSPAN8	ENSG00000127324|ENST00000247829|TSPAN8	ENSG00000127324|ENST00000247829|TSPAN8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7930908203125	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.7932	1	2017	2017		26.796	1.3459	1	3452400			60345	3489	40280	40296	68390	68390					0.10984716596760791
VAVDILIAV	9	Unmodified	_VAVDILIAV_					0	0	0		ENSG00000127324|ENST00000247829|TSPAN8	ENSG00000127324|ENST00000247829|TSPAN8	ENSG00000127324|ENST00000247829|TSPAN8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7928771972656	2	456.791861	911.569169	-0.077665	-3.5477E-05	3.236	0.0014782	3.1584	0.0014427	456.79322700683537	35.356	1.7647	35.603	35.091	36.856	0.24769					159	44	4	0	0	0	0.67235	1	2805	2805		42.474	3.6683	1	6766600			60346	3489	40280	40296	68391	68391					0.10984716596760791
VAVEEPLL	8	Unmodified	_VAVEEPLL_					0	0	0		nc|ENSG00000176871|Q9NYS7-2|WSB2	nc|ENSG00000176871|Q9NYS7-2|WSB2	nc|ENSG00000176871|Q9NYS7-2|WSB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25146484375	2	435.252569	868.490584	-1.5314	-0.00066653	-1.3352	-0.00058116	-2.8666	-0.0012477	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.884	1	7293	7293		33.516	0	1	2494100			60347	15115	40281	40297	68392	68392					0.05107864291676378
VAVEEPLLL	9	Unmodified	_VAVEEPLLL_					0	0	0		nc|ENSG00000176871|Q9NYS7-2|WSB2	nc|ENSG00000176871|Q9NYS7-2|WSB2	nc|ENSG00000176871|Q9NYS7-2|WSB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7967529296875	2	491.794601	981.574648	-0.344	-0.00016918	2.8827	0.0014177	2.5387	0.0012485	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.7932	1	4244	4244		25.45	0	1	412030			60348	15115	40282	40298	68393	68393					0.08312395388577443
VAVFFIML	8	Unmodified	_VAVFFIML_					0	0	0		ENSG00000265808|ENST00000578049|SEC22B	ENSG00000265808|ENST00000578049|SEC22B	ENSG00000265808|ENST00000578049|SEC22B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.27191162109375	2	470.27225	938.529947	1.675	0.00078769	-1.9492	-0.00091665	-0.27421	-0.00012895	470.2713101405092	92.346	2.9868	92.282	91.318	94.305	-0.06414					149	70	4	0	0	0	0.84567	1	9792	9792		24.504	0	1	1961400			60349	8947	40283	40299	68394	68394					0.05822293041535431
VAVGARGLGES	11	Unmodified	_VAVGARGLGES_					0	0	0			REV__ENSG00000005513|ENST00000293894|SOX8	REV__ENSG00000005513|ENST00000293894|SOX8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.2795715332031	2	508.28018	1014.54581	0.22565	0.0001147	-0.11322	-5.7546E-05	0.11244	5.715E-05	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.60058	1	9224	9224		44.377	1.5129	1	1820400	+		60350	16088	40284	40300	68395	68395					0.03911670812158263
VAVGVAFH	8	Unmodified	_VAVGVAFH_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2258605957031	2	400.226688	798.438824	-1.9018	-0.00076116	0.025228	1.0097E-05	-1.8766	-0.00075106	400.22655653180504	40.442	1.8386	40.449	40.071	41.91	0.0065041					122	59	3	0	0	0	0.88393	1	2532	2532		33.493	6.6969	1	995180			60351	1466	40285	40301	68396	68396					0.031541653884119114
VAVGVAFH	8	Unmodified	_VAVGVAFH_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2252197265625	2	400.226688	798.438824	-1.6865	-0.00067499	-0.28364	-0.00011352	-1.9702	-0.00078851	400.22648281591756	40.713	1.6274	41.302	40.835	42.462	0.58915					78	45	3	0	0	0	0.80127	1	3491	3491		16.705	0	1	2567400			60352	1466	40285	40301	68397	68397					0.031541653884119114
VAVKMLNV	8	Unmodified	_VAVKMLNV_					0	0	0		ENST00000497784.1_2_7:140434399-140508041:-|nuORF;ENSG00000157764|ENST00000646891|BRAF	ENST00000497784.1_2_7:140434399-140508041:-|nuORF	ENST00000497784.1_2_7:140434399-140508041:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2653503417969	2	437.264956	872.515359	-2.1366	-0.00093428	3.8525	0.0016846	1.7158	0.00075028	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.90465	1	690	690		40.573	3.4135	1	999210			60353	5447	40286	40302	68398	68398					0.0740022089340755
VAVKMLNV	8	Unmodified	_VAVKMLNV_					0	0	0		ENST00000497784.1_2_7:140434399-140508041:-|nuORF;ENSG00000157764|ENST00000646891|BRAF	ENST00000497784.1_2_7:140434399-140508041:-|nuORF	ENST00000497784.1_2_7:140434399-140508041:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26556396484375	2	437.264956	872.515359	-1.6247	-0.00071044	3.2874	0.0014375	1.6627	0.00072704	437.26636390033156	24.021	1.8701	24.079	23.417	25.287	0.058165					191	86	4	0	0	0	0.91977	1	795	795		45.952	5.3793	1	2248600			60354	5447	40286	40302	68399	68399					0.0740022089340755
VAVKRLIP	8	Unmodified	_VAVKRLIP_					0	0	0		ENSG00000174705|ENST00000311601|SH3PXD2B	ENSG00000174705|ENST00000311601|SH3PXD2B	ENSG00000174705|ENST00000311601|SH3PXD2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.30767822265625	2	448.308013	894.601472	-0.58085	-0.0002604	0.87174	0.00039081	0.29088	0.00013041	448.3082265393825	78.118	0.74159	78.523	78.182	78.924	0.4053					36	17	3	0	0	0	0.81724	1	8922	8922		14.664	0	1	343680			60355	6955	40287	40303	68400	68400					0.14995548790420798
VAVKRLTIPRS	11	Unmodified	_VAVKRLTIPRS_					0	0	0			REV__ENST00000596318.1_1_19:49553653-49553959:-|nuORF	REV__ENST00000596318.1_1_19:49553653-49553959:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9326171875	3	413.934706	1238.78229	-1.896	-0.00078482	-2.7964	-0.0011575	-4.6924	-0.0019423	413.93352675822	43.019	1.5308	43.025	42.029	43.559	0.0057487					104	42	4	0	0	0	0.74405	1	2931	2931		23.378	6.2112	1	469080	+		60356	29256	40288	40304	68401	68401					0.1724502237645993
VAVKTSAKKDS	11	Unmodified	_VAVKTSAKKDS_					0	0	0		nc|ENSG00000173406|O75553-2|DAB1;nc|ENSG00000173406|O75553-3|DAB1;nc|ENSG00000173406|O75553-4|DAB1;nc|ENSG00000173406|O75553-5|DAB1;ENSG00000173406|ENST00000371236|DAB1;nc|ENSG00000173406|O75553|DAB1	nc|ENSG00000173406|O75553-2|DAB1	nc|ENSG00000173406|O75553-2|DAB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3297119140625	2	567.32987	1132.64519	1.497	0.00084932	-1.6772	-0.00095153	-0.18017	-0.00010222	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.67778	1	9695	9695		35.152	4.6484	1	15259000			60357	6857	40289	40305	68402	68402					0.08417068706262398
VAVNRSHG	8	Unmodified	_VAVNRSHG_					0	0	0		ENSG00000196639|ENST00000431010|HRH1	ENSG00000196639|ENST00000431010|HRH1	ENSG00000196639|ENST00000431010|HRH1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22650146484375	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.87276	1	7139	7139		29.842	1.9593	1	419890			60358	8084	40290	40306	68403	68403					0.015265941262327942
VAVPPSLLV	9	Unmodified	_VAVPPSLLV_					0	0	0		ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.7877502441406	2	447.786579	893.558604	-0.87624	-0.00039237	3.8727	0.0017341	2.9964	0.0013418	447.7881611915091	38.996	1.1099	39.55	38.943	40.053	0.55449					73	25	5	0	0	0	0.7932	1	3259	3259		20.482	0	1	1131000			60359	13822	40291	40307	68404	68404					0.10756733942343999
VAVPPSLLV	9	Unmodified	_VAVPPSLLV_					0	0	0		ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	447.786579	893.558604	-1.8856	-0.00084433	4.6482	0.0020814	2.7626	0.0012371	447.78851579990373	39.794	0.76491	39.794	39.337	40.102	0	-0.068041	0.00096999	NaN	20.482	48	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	302870			60360	13822	40291	40307							0.10756733942343999
VAVPPSLLV	9	Unmodified	_VAVPPSLLV_					0	0	0		ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	447.786579	893.558604	0.15843	7.0942E-05	1.2223	0.00054732	1.3807	0.00061826	447.7870053194849	40.112	0.72483	40.081	39.65	40.375	-0.030991	0.21856	-0.0020982	NaN	20.482	43	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	264260			60361	13822	40291	40307							0.10756733942343999
VAVPPSLLV	9	Unmodified	_VAVPPSLLV_					0	0	0		ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	447.786579	893.558604	-1.3443	-0.00060198	3.5743	0.0016005	2.2299	0.00099853	447.7880437505113	39.978	0.86179	39.934	39.407	40.269	-0.043694	0.07238	8.212E-06	NaN	20.482	47	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	276040			60362	13822	40291	40307							0.10756733942343999
VAVPPSLLV	9	Unmodified	_VAVPPSLLV_					0	0	0		ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	447.786579	893.558604	-0.70205	-0.00031437	2.6884	0.0012038	1.9863	0.00088946	447.7876456757252	39.939	0.72427	39.948	39.513	40.237	0.0092773	0.085771	-0.00078516	NaN	20.482	42	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	285560			60363	13822	40291	40307							0.10756733942343999
VAVPPSLLV	9	Unmodified	_VAVPPSLLV_					0	0	0		ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	447.786579	893.558604	-1.3921	-0.00062335	4.0213	0.0018007	2.6292	0.0011773	447.7882463659937	39.931	0.70655	39.937	39.529	40.236	0.0065002	0.075075	0.00040855	NaN	20.482	39	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	293950			60364	13822	40291	40307							0.10756733942343999
VAVPPSLLV	9	Unmodified	_VAVPPSLLV_					0	0	0		ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	447.786579	893.558604	0.20059	8.9822E-05	2.4949	0.0011172	2.6955	0.001207	447.78754862428656	39.793	0.70563	39.881	39.427	40.133	0.088371	0.019133	-0.00095841	NaN	20.482	39	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272370			60365	13822	40291	40307							0.10756733942343999
VAVPPSLLV	9	Unmodified	_VAVPPSLLV_					0	0	0		ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	ENST00000560875.1_1_14:24616005-24616727:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	447.786579	893.558604	-0.070652	-3.1637E-05	2.7209	0.0012184	2.6503	0.0011868	447.7876742628608	39.819	0.70093	39.771	39.381	40.082	-0.04789	-0.091164	-0.00075603	NaN	20.482	41	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	266410			60366	13822	40291	40307							0.10756733942343999
VAVQSVGQCY	10	Unmodified	_VAVQSVGQCY_					0	0	0			REV__nc|ENSG00000276717|A8MTI9|PRSS47P	REV__nc|ENSG00000276717|A8MTI9|PRSS47P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.259033203125	2	527.255317	1052.49608	0.18982	0.00010008	3.3845	0.0017845	3.5743	0.0018846	527.2569773987498	25.608	1.1817	25.567	25.152	26.334	-0.041168					66	30	4	0	0	0	0.86763	1	1128	1128		26.693	1.1189	1	378560	+		60367	30270	40292	40308	68405	68405					-0.02806780188166158
VAYAAPGPR	9	Unmodified	_VAYAAPGPR_					0	0	0		ENSG00000137392|ENST00000259938|CLPS	ENSG00000137392|ENST00000259938|CLPS	ENSG00000137392|ENST00000259938|CLPS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.24725341796875	2	451.248152	900.481751	-0.60944	-0.00027501	2.0486	0.00092444	1.4392	0.00064943	451.24890898084885	67.67	1.2739	67.634	67.25	68.524	-0.035698					111	49	3	0	0	0	0.7932	1	6478	6478		26.796	1.222	1	185140			60368	4193	40293	40309	68406	68406					0.02752935445857929
VAYAAPGPR	9	Unmodified	_VAYAAPGPR_					0	0	0		ENSG00000137392|ENST00000259938|CLPS	ENSG00000137392|ENST00000259938|CLPS	ENSG00000137392|ENST00000259938|CLPS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.24664306640625	2	451.248152	900.481751	-0.10221	-4.6121E-05	1.3002	0.00058673	1.198	0.00054061	451.2485604594887	67.676	1.2933	67.706	67.22	68.514	0.030571					94	49	2	0	0	0	0.76996	1	6387	6387		33.516	0	1	178200			60369	4193	40293	40309	68407	68407					0.02752935445857929
VAYVPSIS	8	Unmodified	_VAYVPSIS_					0	0	0		ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	ENSG00000118412|ENST00000551025|CASP8AP2	ENSG00000118412|ENST00000551025|CASP8AP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	418.2291564941406	2	418.231636	834.448719	-0.35677	-0.00014921	-4.0162	-0.0016797	-4.3729	-0.0018289	418.22978342070365	27.231	0.86749	27.192	26.805	27.673	-0.038523					34	21	3	0	0	0	0.94132	1	1283	1283		54.765	3.4292	1	72905			60370	3028	40294	40310	68408	68408					0.024873086031334424
VCAEMLDE	8	Unmodified	_VCAEMLDE_					0	0	0			REV__ENSG00000137501|ENST00000359152|SYTL2	REV__ENSG00000137501|ENST00000359152|SYTL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.1880187988281	2	455.188254	908.361955	0.65959	0.00030024	-0.18182	-8.2762E-05	0.47777	0.00021748	455.1880843326598	25.182	1.1689	25.145	24.668	25.837	-0.037178					47	31	3	0	0	0	0.86791	1	973	973		28.254	0	1	59550	+		60371	19388	40295	40311	68409	68409					-0.09589182005231578
VCALVLKH	8	Unmodified	_VCALVLKH_					0	0	0			REV__ENSG00000145332|ENST00000273963|KLHL8	REV__ENSG00000145332|ENST00000273963|KLHL8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.76824951171875	2	441.765123	881.515694	4.6911	0.0020724	1.7355	0.00076667	6.4266	0.0028391	441.76590394209916	107.02	1.0661	107.17	106.81	107.88	0.14929					95	39	4	0	0	0	0.87807	1	13065	13065		31.579	8.5364	1	3173300	+		60372	19938	40296	40312	68410	68410					0.07019640613248157
VCASSFSH	8	Unmodified	_VCASSFSH_					0	0	0			REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	REV__nc|ENSG00000167703|Q8N370-2|SLC43A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1837463378906	2	419.18162	836.348688	-0.61734	-0.00025878	4.3624	0.0018286	3.7451	0.0015699	419.18379974001596	92.26	1.9431	92.723	91.934	93.877	0.46249					113	45	4	0	0	0	0.9159	1	11002	11002		44.531	8.9128	1	2961200	+		60373	28940	40297	40313	68411	68411					-0.07603252002309091
VCAYPKEGTHI	11	Unmodified	_VCAYPKEGTHI_					0	0	0			REV__ENST00000585612.1_1_19:56934624-56945194:+|nuORF	REV__ENST00000585612.1_1_19:56934624-56945194:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.5388488769531	3	406.537624	1216.59104	0.13634	5.5428E-05	3.4673	0.0014096	3.6036	0.001465	406.5390050089025	30.723	0.64022	30.748	30.447	31.087	0.025013					52	19	4	0	0	0	0.62914	1	1614	1614		41.08	0	1	266510	+		60374	23326	40298	40314	68412	68412					-0.008588467169829528
VCCLRCCFS	9	3 Carbamidomethyl (C)	_VC(Carbamidomethyl (C))CLRC(Carbamidomethyl (C))C(Carbamidomethyl (C))FS_	VC(0.508)C(0.508)LRC(0.984)C(1)FS		VC(0)C(0)LRC(15)C(37)FS		0	3	0		ENST00000517685.5_1_16:67201036-67202834:+|nuORF	ENST00000517685.5_1_16:67201036-67202834:+|nuORF	ENST00000517685.5_1_16:67201036-67202834:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	602.7420654296875	2	602.740139	1203.46573	-1.1695	-0.00070491	4.0325	0.0024306	2.863	0.0017257	602.7423420873305	84.857	1.087	85.007	84.363	85.451	0.14952					55	24	3	0	0	0	0.43338	1	8227	8227		55.504	11.127	4	343720			60375	13105	40299	40315	68413	68413	172;173;174;175				-0.12786921440897459
VCDLNLWYLQ	10	Unmodified	_VCDLNLWYLQ_					0	0	0		ENST00000518143.1_1_8:77595408-77595477:-|nuORF	ENST00000518143.1_1_8:77595408-77595477:-|nuORF	ENST00000518143.1_1_8:77595408-77595477:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.814453125	2	633.812999	1265.61144	0.41115	0.00026059	2.6762	0.0016962	3.0873	0.0019568	633.8146373815393	75.69	0.90498	75.736	75.32	76.224	0.046448					72	23	4	0	0	0	0.36572	1	7381	7381		54.776	0	1	489770			60376	13115	40300	40316	68414	68414					-0.010736760571489867
VCDSADRIRDT	11	Unmodified	_VCDSADRIRDT_					0	0	0		ENST00000471950.1_1_X:70828916-70832410:+|nuORF;ENSG00000147174|ENST00000373696|GCNA	ENST00000471950.1_1_X:70828916-70832410:+|nuORF	ENST00000471950.1_1_X:70828916-70832410:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.2523498535156	3	417.531309	1249.5721	1.1362	0.00047439	3.2179	0.0013436	4.3541	0.001818	417.5317977966449	35.173	0.35035	35.421	35.203	35.554	0.24769					18	8	3	0	0	0	0.17586	1	2656	2656		21.78	7.6944	1	85788			60377	4887	40301	40317	68415	68415					-0.04270428078734767
VCDSADRIRDT	11	Unmodified	_VCDSADRIRDT_					0	0	0		ENST00000471950.1_1_X:70828916-70832410:+|nuORF;ENSG00000147174|ENST00000373696|GCNA	ENST00000471950.1_1_X:70828916-70832410:+|nuORF	ENST00000471950.1_1_X:70828916-70832410:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	417.531309	1249.5721	1.3768	0.00057485	-0.022523	-9.404E-06	1.3543	0.00056545	417.531332504371	35.136	0.38374	35.517	35.326	35.71	0.3812	0.048225	-0.0016045	NaN	21.78	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91715			60378	4887	40301	40317							-0.04270428078734767
VCFFLTPPFF	10	Unmodified	_VCFFLTPPFF_					0	0	0		ENST00000512383.1_1_5:75964652-75969784:+|nuORF	ENST00000512383.1_1_5:75964652-75969784:+|nuORF	ENST00000512383.1_1_5:75964652-75969784:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.5390319824219	3	406.540306	1216.59909	0.11706	4.759E-05	-3.1481	-0.0012798	-3.031	-0.0012322	406.53896859054584	30.489	0.56195	30.487	30.29	30.852	-0.0022526					59	27	3	0	0	0	0.76096	1	1355	1355		41.427	2.673	1	224080			60379	13034	40302	40318	68416	68416					-0.0005466772959152877
VCGLALVISL	10	Unmodified	_VCGLALVISL_					0	0	0			REV__ENSG00000157005|ENST00000287641|SST	REV__ENSG00000157005|ENST00000287641|SST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.30078125	2	494.298996	986.583439	-0.074801	-3.6974E-05	3.5667	0.001763	3.4919	0.001726	494.30075143902303	97.483	4.0876	97.54	96.775	100.86	0.056839					393	94	6	0	0	0	0.71042	1	10341	10341		44.117	5.3107	1	54076000	+		60380	20521	40303	40319	68417	68417					0.08961045753392227
VCGLIIIVTT	10	Unmodified	_VCGLIIIVTT_					0	0	0		ENST00000341567.8_1_7:66420943-66421105:+|nuORF	ENST00000341567.8_1_7:66420943-66421105:+|nuORF	ENST00000341567.8_1_7:66420943-66421105:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3140258789062	2	516.312103	1030.60965	-0.25527	-0.0001318	4.18	0.0021582	3.9248	0.0020264	516.3141964907301	102.01	1.1313	102.2	101.89	103.02	0.19484					90	27	4	0	0	0	0.86305	1	10803	10803		31.955	1.4512	1	1199700			60381	10250	40304	40320	68418	68418					0.09557314924882121
VCGLLVFLSLG	11	Unmodified	_VCGLLVFLSLG_					0	0	0		ENSG00000149635|ENST00000279028|OCSTAMP	ENSG00000149635|ENST00000279028|OCSTAMP	ENSG00000149635|ENST00000279028|OCSTAMP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.8260498046875	2	560.825378	1119.6362	-1.0474	-0.00058741	2.5722	0.0014426	1.5248	0.00085517	560.8265219498778	50.913	0.64624	50.911	50.705	51.351	-0.0020447					51	20	3	0	0	0	0.72228	1	4336	4336		27.882	0	1	533400			60382	5040	40305	40321	68419	68419					0.08117003816209944
VCIEFICLL	9	Unmodified	_VCIEFICLL_					0	0	0			REV__ENST00000366959.4_1_1:213447250-213447538:+|nuORF	REV__ENST00000366959.4_1_1:213447250-213447538:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.7804565429688	2	526.779582	1051.54461	0.48376	0.00025483	0.1637	8.6232E-05	0.64745	0.00034106	526.7794867271836	62.521	0.96588	62.642	62.272	63.238	0.1209					100	46	3	0	0	0	0.5393	1	5475	5475		50.025	2.1089	1	677390	+		60383	25540	40306	40322	68420	68420					0.02089997127359311
VCKLGLLH	8	Unmodified	_VCKLGLLH_					0	0	0		ENST00000483599.5_1_9:131607715-131609135:-|nuORF	ENST00000483599.5_1_9:131607715-131609135:-|nuORF	ENST00000483599.5_1_9:131607715-131609135:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7679443359375	2	441.765123	881.515694	4.6911	0.0020724	1.7355	0.00076667	6.4266	0.0028391	441.76590394209916	107.02	1.0661	107.17	106.81	107.88	0.14929					95	39	4	0	0	0	0.86791	1	13100	13100		28.254	0	1	3173300			60384	12518	40307	40323	68421	68421					0.07019640613259526
VCKQIAGH	8	Unmodified	_VCKQIAGH_					0	0	0			REV__ENST00000560351.2_1_15:101459090-101459309:-|nuORF	REV__ENST00000560351.2_1_15:101459090-101459309:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.26153564453125	2	428.228905	854.443257	1.236	0.0005293	-3.9378	-0.0016863	-2.7017	-0.001157	428.2269805491407	90.679	0.43792	91.129	90.904	91.342	0.45058					14	10	2	0	0	0	0.4196	1	10745	10745		19.36	0	1	49049	+		60385	28759	40308	40324	68422	68422					0.010213065396897036
VCKWLLLTQ	9	Carbamidomethyl (C)	_VC(Carbamidomethyl (C))KWLLLTQ_	VC(1)KWLLLTQ		VC(93)KWLLLTQ		0	1	0			REV__ENST00000216297.6_1_14:21837363-21837492:-|nuORF	REV__ENST00000216297.6_1_14:21837363-21837492:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.828857421875	2	580.828452	1159.64235	-1.0916	-0.00063402	4.3446	0.0025235	3.2531	0.0018895	580.8307679449848	59.536	0.88874	60.089	59.574	60.463	0.55323					49	22	3	0	0	0	0.096131	1	6288	6288		93.195	8.0346	1	1358100	+		60386	24130	40309	40325	68423	68423	295				0.0689152204772654
VCLALLTAPG	10	Unmodified	_VCLALLTAPG_					0	0	0			REV__ENSG00000105538|ENST00000222145|RASIP1	REV__ENSG00000105538|ENST00000222145|RASIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2776184082031	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.81018	1	9920	9920		38.806	1.298	1	5642300	+		60387	17548	40310	40326	68424	68424					0.05648186202256511
VCLEPEVVN	9	Unmodified	_VCLEPEVVN_					0	0	0		nc|ENSG00000185917|Q9NVD3-4|SETD4;nc|ENSG00000185917|Q9NVD3-3|SETD4;ENSG00000185917|ENST00000332131|SETD4	nc|ENSG00000185917|Q9NVD3-4|SETD4	nc|ENSG00000185917|Q9NVD3-4|SETD4	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2904968261719	2	501.252243	1000.48993	-0.95247	-0.00047743	1.6048	0.00080441	0.65233	0.00032698	501.25295737460794	86.55	0.39061	86.55	86.343	86.733	0					10	8	2	0	0	0	0.20789	1	8257	8257		37.159	1.5408	1	39827			60388	7756	40311	40327	68425	68425					-0.010292984196894395
VCLGKILEYLD	11	Unmodified	_VCLGKILEYLD_					0	0	0		chr12:100317692-100317803|35|24.23|0.91|4.74|+|ENST00000635101|SCYL2,SCYL2;ENSG00000136021|ENST00000360820|SCYL2;ENST00000392253.2_1_2:202275976-202276645:-|nuORF	chr12:100317692-100317803|35|24.23|0.91|4.74|+|ENST00000635101|SCYL2,SCYL2;ENST00000392253.2_1_2:202275976-202276645:-|nuORF	chr12:100317692-100317803|35|24.23|0.91|4.74|+|ENST00000635101|SCYL2,SCYL2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.3066711425781	3	422.56518	1264.67371	2.3767	0.0010043	-2.341	-0.00098924	0.035629	1.5055E-05	422.56447942732353	26.313	0.48718	25.973	25.745	26.232	-0.34035					13	10	2	0	0	0	0.17478	1	1476	1476		17.167	0	1	26048			60389	110;11015	40312	40328	68426	68426					0.051960502911697404
VCLLWLWAPV	10	Unmodified	_VCLLWLWAPV_					0	0	0			REV__nc|ENSG00000166589|O75309-3|CDH16	REV__nc|ENSG00000166589|O75309-3|CDH16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.5594177246094	3	400.559701	1198.65727	0.91168	0.00036518	-3.8796	-0.001554	-2.9679	-0.0011888	400.5580759097414	19.227	0.64959	19.301	19.049	19.698	0.073463					57	20	4	0	0	0	0.86786	1	397	397		31.53	17.444	1	362530	+		60390	21306	40313	40329	68427	68427					0.06589013915709074
VCLRLNPVV	9	Unmodified	_VCLRLNPVV_					0	0	0			REV__ENST00000526525.1_1_11:126139211-126143019:+|nuORF	REV__ENST00000526525.1_1_11:126139211-126143019:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8001708984375	2	506.802237	1011.58992	-0.4843	-0.00024544	-1.1848	-0.00060045	-1.6691	-0.00084589	506.8016364988691	53.923	1.2683	53.971	53.181	54.449	0.047802					71	44	2	0	0	0	0.7932	1	4425	4425		25.45	1.2474	1	157540	+		60391	28210	40314	40330	68428	68428					0.08458983704758793
VCLSTKYDSFI	11	Unmodified	_VCLSTKYDSFI_					0	0	0			REV__nc|ENSG00000188992|Q6XZB0-4|LIPI	REV__nc|ENSG00000188992|Q6XZB0-4|LIPI	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	638.3164672851562	2	638.318114	1274.62167	1.2406	0.0007919	-3.4911	-0.0022284	-2.2505	-0.0014365	638.3157834446171	71.864	1.5253	72.415	72.071	73.597	0.55009					104	36	5	0	0	0	0.45992	1	8019	8019		54.722	11.858	1	7237600	+		60392	30118	40315	40331	68429	68429					-0.00465113122618277
VCLVLLVAN	9	Unmodified	_VCLVLLVAN_					0	0	0		nc|ENSG00000122490|Q8N2U9-3|SLC66A2;nc|ENSG00000122490|Q8N2U9-2|SLC66A2;ENSG00000122490|ENST00000397778|SLC66A2	nc|ENSG00000122490|Q8N2U9-3|SLC66A2	nc|ENSG00000122490|Q8N2U9-3|SLC66A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.2874755859375	2	472.285889	942.557224	-0.108	-5.1006E-05	3.8671	0.0018264	3.7591	0.0017754	472.28765986508125	95.38	4.3219	95.446	94.712	99.034	0.065964					340	100	6	0	0	0	0.7932	1	10023	10023		26.796	0	1	46909000			60393	3229	40316	40332	68430	68430					0.08364776581902333
VCLVLLVAN	9	Unmodified	_VCLVLLVAN_					0	0	0		nc|ENSG00000122490|Q8N2U9-3|SLC66A2;nc|ENSG00000122490|Q8N2U9-2|SLC66A2;ENSG00000122490|ENST00000397778|SLC66A2	nc|ENSG00000122490|Q8N2U9-3|SLC66A2	nc|ENSG00000122490|Q8N2U9-3|SLC66A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.28765869140625	2	472.285889	942.557224	0.72641	0.00034307	3.0865	0.0014577	3.8129	0.0018008	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.7932	1	9745	9745		26.796	0.10319	1	48696000			60394	3229	40316	40332	68431	68431					0.08364776581902333
VCLVLPLLL	9	Unmodified	_VCLVLPLLL_					0	0	0			REV__ENST00000415659.2_1_5:122364834-122372365:-|nuORF	REV__ENST00000415659.2_1_5:122364834-122372365:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7967529296875	2	491.822107	981.629661	0.46427	0.00022834	-1.179	-0.00057986	-0.71474	-0.00035153	491.82166816296893	64.113	0.31255	64.237	64.125	64.438	0.12396					13	12	2	0	0	0	0.20789	1	5634	5634		29.842	15.177	1	59950	+		60395	21536	40317	40333	68432	68432					0.1381111065549021
VCPLCNTPI	9	Unmodified	_VCPLCNTPI_					0	0	0		ENSG00000178381|ENST00000316495|ZFAND2A	ENSG00000178381|ENST00000316495|ZFAND2A	ENSG00000178381|ENST00000316495|ZFAND2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2376708984375	2	480.238081	958.461609	-0.56983	-0.00027365	-0.42407	-0.00020366	-0.9939	-0.00047731	480.23769823469456	52.221	0.98739	52.888	52.596	53.584	0.66729					47	23	3	0	0	0	0.18601	1	5242	5242		76.774	5.4784	1	1035100			60396	7202	40318	40334	68433	68433					-0.019283196006199432
VCPSLSSH	8	Unmodified	_VCPSLSSH_					0	0	0			REV__ENSG00000167800|ENST00000335385|TBX10	REV__ENSG00000167800|ENST00000335385|TBX10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2547302246094	2	415.19727	828.379988	2.1263	0.00088281	3.3434	0.0013882	5.4696	0.002271	415.19860852140846	97.219	1.6819	97.624	97.095	98.777	0.40498					65	40	2	0	0	0	0.4196	1	11725	11725		26.796	0	1	339090	+		60397	21429	40319	40335	68434	68434					-0.041066789682190574
VCRDVYAGL	9	Unmodified	_VCRDVYAGL_					0	0	0		ENST00000589111.5_1_19:39359746-39361880:-|nuORF;nc|ENSG00000187994|Q6ZS11-2|RINL;ENSG00000187994|ENST00000591812|RINL	ENST00000589111.5_1_19:39359746-39361880:-|nuORF	ENST00000589111.5_1_19:39359746-39361880:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.25006103515625	2	498.252577	994.490601	-0.99209	-0.00049431	-3.1151	-0.0015521	-4.1072	-0.0020464	498.25142789231467	84.759	2.4523	84.759	83.586	86.038	0					132	57	3	0	0	0	0.78058	1	7908	7908		30.504	1.3541	1	112180			60398	7897	40320	40336	68435	68435					-0.006864589799761234
VCRNVLLD	8	Unmodified	_VCRNVLLD_					0	0	0		ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3	ENSG00000163468|ENST00000295688|CCT3	ENSG00000163468|ENST00000295688|CCT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2530822753906	2	466.25512	930.495686	-0.11946	-5.5699E-05	-2.1117	-0.00098461	-2.2312	-0.0010403	466.254016420627	63.003	1.4791	62.997	62.043	63.523	-0.0055504					91	67	2	0	0	0	0.90983	1	5847	5847		42.396	1.8235	1	129040			60399	5801	40321	40337	68436	68436					0.027658448826400672
VCRRMKPDP	9	Unmodified	_VCRRMKPDP_					0	0	0		L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|126|3|sense	L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|126|3|sense	L1MA3_dup6465|chr11:73108871-73112664:-|1.0365117873062737|0.1071510757737337|3.27|63.0|126|3|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.2854614257812	2	551.286428	1100.5583	0.015506	8.5483E-06	0.65237	0.00035964	0.66787	0.00036819	551.2868057163188	18.671	0.28084	18.194	18.077	18.357	-0.47694					6	5	2	0	0	0	0.20789	1	409	409		21.96	1.013	1	19452			60400	14542	40322	40338	68437	68437					0.01204667679189697
VCSSLCSQ	8	Unmodified	_VCSSLCSQ_					0	0	0			REV__ENST00000504411.1_1_5:135396881-135398912:+|nuORF	REV__ENST00000504411.1_1_5:135396881-135398912:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.23675537109375	2	413.675314	825.336074	0.13698	5.6665E-05	-2.5689	-0.0010627	-2.4319	-0.001006	413.67418766199285	64.365	0.75015	64.919	64.517	65.267	0.55386					29	17	2	0	0	0	0.4196	1	6942	6942		35.618	10.168	1	71921	+		60401	27860	40323	40339	68438	68438					-0.08358031456850767
VCSVTLLITI	10	Unmodified	_VCSVTLLITI_					0	0	0		ENSG00000163964|ENST00000392391|PIGX;nc|ENSG00000163964|Q8TBF5-2|PIGX	ENSG00000163964|ENST00000392391|PIGX	ENSG00000163964|ENST00000392391|PIGX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3187866210938	2	531.317386	1060.62022	1.7702	0.00094052	1.4799	0.00078629	3.25	0.0017268	531.3180188955155	94.734	1.4927	95.166	94.713	96.206	0.4324					93	35	4	0	0	0	0.8608	1	11303	11303		34.173	2.5383	1	2051100			60402	5896	40324	40340	68439	68439					0.09233297579316968
VCSVTLLITI	10	Unmodified	_VCSVTLLITI_					0	0	0		ENSG00000163964|ENST00000392391|PIGX;nc|ENSG00000163964|Q8TBF5-2|PIGX	ENSG00000163964|ENST00000392391|PIGX	ENSG00000163964|ENST00000392391|PIGX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.3189697265625	2	531.317386	1060.62022	0.23787	0.00012639	2.413	0.0012821	2.6509	0.0014084	531.3183123814076	94.878	1.4608	95.298	94.89	96.35	0.41963					101	35	4	0	0	0	0.85934	1	11353	11353		35.618	7.736	1	2093500			60403	5896	40324	40340	68440	68440					0.09233297579316968
VCTCVEPG	8	Unmodified	_VCTCVEPG_					0	0	0		ENSG00000079432|ENST00000681038|CIC	ENSG00000079432|ENST00000681038|CIC	ENSG00000079432|ENST00000681038|CIC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.1703186035156	2	404.172407	806.330261	-1.8319	-0.00074042	-3.7939	-0.0015334	-5.6259	-0.0022738	404.17089024317255	78.364	3.0861	78.491	77.697	80.783	0.12695					160	99	2	0	0	0	0.86288	1	7488	7488		26.796	0	1	7642900			60404	1421	40325	40341	68441	68441					-0.08065129968531437
VCTHEENSL	9	Unmodified	_VCTHEENSL_					0	0	0			REV__ENSG00000225190|ENST00000430334|PLEKHM1	REV__ENSG00000225190|ENST00000430334|PLEKHM1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3137817382812	2	516.226756	1030.43896	-0.26182	-0.00013516	2.6531	0.0013696	2.3913	0.0012344	516.2282007618873	99.004	0.41452	99.226	98.833	99.247	0.22262					13	9	2	0	0	0	0.20789	1	10276	10276		37.159	3.6435	1	196080	+		60405	23737	40326	40342	68442	68442					-0.07504247464544278
VCVCAARWN	9	Unmodified	_VCVCAARWN_					0	0	0			REV__ENST00000492155.5_1_10:13749134-13749302:-|nuORF	REV__ENST00000492155.5_1_10:13749134-13749302:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2386169433594	2	511.238947	1020.46334	-0.45697	-0.00023362	-0.3847	-0.00019668	-0.84167	-0.00043029	511.2386039961532	51.045	1.5771	51.021	50.12	51.697	-0.02343					57	43	2	0	0	0	0.76996	1	4448	4448		33.516	0.70317	1	99648	+		60406	27667	40327	40343	68443	68443					-0.04607265792026283
VCVPACPPNTY	11	Unmodified	_VCVPACPPNTY_					0	0	0		ENSG00000140443|ENST00000650285|IGF1R	ENSG00000140443|ENST00000650285|IGF1R	ENSG00000140443|ENST00000650285|IGF1R	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.353515625	2	582.264827	1162.5151	0.18097	0.00010537	-2.9141	-0.0016967	-2.7331	-0.0015914	582.2639235775453	103.77	0.20924	103.81	103.75	103.96	0.041481					6	4	2	0	0	0	0.17347	1	11292	11292		36.447	13.404	1	29578			60407	4432	40328	40344	68444	68444					-0.05965566888767171
VCVPFDIIL	9	Unmodified	_VCVPFDIIL_					0	0	0		nc|ENSG00000166073|Q14439-2|GPR176;nc|ENSG00000166073|Q14439-3|GPR176;ENSG00000166073|ENST00000561100|GPR176	nc|ENSG00000166073|Q14439-2|GPR176	nc|ENSG00000166073|Q14439-2|GPR176	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.7849426269531	2	509.785721	1017.55689	2.0303	0.001035	-3.2748	-0.0016694	-1.2445	-0.00063444	509.783792223419	106.11	0.72634	106.24	105.98	106.71	0.12742					70	32	3	0	0	0	0.72402	1	12959	12959		38.806	3.1879	1	602380			60408	6153	40329	40345	68445	68445					0.048813568620630576
VCVQVHLN	8	Unmodified	_VCVQVHLN_					0	0	0			REV__ENST00000498706.5_1_2:64808202-64819166:+|nuORF	REV__ENST00000498706.5_1_2:64808202-64819166:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.6084289550781	2	456.242012	910.469472	0.46819	0.00021361	-4.4615	-0.0020355	-3.9933	-0.0018219	456.24088036845376	68.345	1.0794	68.474	67.963	69.043	0.12838					84	40	3	0	0	0	0.4196	1	6118	6118		12.207	0	1	116830	+		60409	27793	40330	40346	68446	68446					0.01065575711152178
VDAGLEDAGKY	11	Unmodified	_VDAGLEDAGKY_					0	0	0		ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	569.2769775390625	2	569.274761	1136.53497	0.087818	4.9993E-05	-0.11822	-6.7301E-05	-0.030405	-1.7309E-05	569.2748918434346	58.626	0.62676	58.595	58.209	58.836	-0.030888					43	19	3	0	0	0	0.70584	1	5451	5451		30.569	0	1	198820			60410	8339	40331	40347	68447	68447					-0.02783776352816858
VDAGLEDAGKY	11	Unmodified	_VDAGLEDAGKY_					0	0	0		ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	569.2747802734375	2	569.274761	1136.53497	0.45077	0.00025661	-0.25919	-0.00014755	0.19158	0.00010906	569.274532960243	58.596	0.96936	58.683	58.327	59.296	0.087002					138	45	4	0	0	0	0.10023	1	4996	4996		93.143	2.5424	1	2576000			60411	8339	40331	40347	68448	68448					-0.02783776352816858
VDAGLEDAGKY	11	Unmodified	_VDAGLEDAGKY_					0	0	0		ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	569.2749633789062	2	569.274761	1136.53497	0.4898	0.00027883	-0.3771	-0.00021467	0.1127	6.4158E-05	569.2744694870318	58.537	1.2979	58.647	58.343	59.641	0.11027					132	48	4	0	0	0	0.025156	3	4989	4989;4997;5020		107.01	10.652	1	2907600			60412	8339	40331	40347	68449;68450;68451	68449					-0.02783776352816858
VDAGLEDAGKY	11	Unmodified	_VDAGLEDAGKY_					0	0	0		ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.2750244140625	2	569.274761	1136.53497	-0.34666	-0.00019734	0.54542	0.00031049	0.19876	0.00011315	569.2749940936244	58.625	1.0905	58.617	58.275	59.365	-0.0074425					124	43	4	0	0	0	0.0039735	2	4990	4990;5010		114.89	29.734	1	2598100			60413	8339	40331	40347	68452;68453	68452					-0.02783776352816858
VDALKKMLL	9	Oxidation (M)	_VDALKKM(Oxidation (M))LL_		VDALKKM(1)LL		VDALKKM(46)LL	0	0	1		ENSG00000115204|ENST00000380044|MPV17	ENSG00000115204|ENST00000380044|MPV17	ENSG00000115204|ENST00000380044|MPV17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.821533203125	2	523.817553	1045.62055	2.4724	0.0012951	2.826	0.0014803	5.2985	0.0027754	523.8192193723954	107.75	0.79723	107.85	107.16	107.96	0.10396					58	30	2	0	0	0	0.62081	1	13132	13132		45.952	10.334	1	1011100			60414	2817	40332	40348	68454	68454		57			0.09956717299155571
VDALKKMLL	9	Oxidation (M)	_VDALKKM(Oxidation (M))LL_					0	0	1		ENSG00000115204|ENST00000380044|MPV17	ENSG00000115204|ENST00000380044|MPV17	ENSG00000115204|ENST00000380044|MPV17	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	523.817553	1045.62055	4.827	0.0025285	0.74905	0.00039236	5.576	0.0029208	523.817971029501	107.71	0.79254	107.82	107.14	107.94	0.11715	-0.013627	-0.00085559	NaN	45.952	48	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	567820			60415	2817	40332	40348				57			0.09956717299155571
VDAVHRGLG	9	Unmodified	_VDAVHRGLG_					0	0	0		ENST00000565298.5_1_16:1560947-1574065:-|nuORF;nc|ENSG00000187535|Q96RY7-2|IFT140;ENSG00000187535|ENST00000426508|IFT140	ENST00000565298.5_1_16:1560947-1574065:-|nuORF	ENST00000565298.5_1_16:1560947-1574065:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.2552795410156	2	462.256508	922.498464	-0.66018	-0.00030517	-1.031	-0.00047661	-1.6912	-0.00078178	462.25599733554526	52.52	1.5182	52.944	52.318	53.836	0.42348					74	36	3	0	0	0	0.38563	1	5261	5261		58.782	12.83	1	3176800			60416	7858	40333	40349	68455	68455					0.03411436331816731
VDDLVSLVAE	10	Unmodified	_VDDLVSLVAE_					0	0	0			REV__ENSG00000144410|ENST00000272852|CPO	REV__ENSG00000144410|ENST00000272852|CPO	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2807006835938	2	530.282054	1058.54956	-0.94277	-0.00049994	1.0154	0.00053847	0.072671	3.8536E-05	530.2823999418666	76.854	0.63409	76.854	76.429	77.063	0					42	27	2	0	0	0	0.46422	1	6996	6996		58.782	2.0609	1	109900	+		60417	19888	40334	40350	68456	68456					0.02262295795344471
VDEDRLSPL	9	Unmodified	_VDEDRLSPL_					0	0	0		ENSG00000101412|ENST00000343380|E2F1	ENSG00000101412|ENST00000343380|E2F1	ENSG00000101412|ENST00000343380|E2F1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.2726440429688	2	522.272021	1042.52949	-0.90194	-0.00047106	0.41756	0.00021808	-0.48438	-0.00025298	522.2720353575503	46.853	0.51814	47.776	47.563	48.081	0.92315					20	11	2	0	0	0	0.47797	1	4460	4460		53.089	1.7535	1	1225700			60418	1940	40335	40351	68457	68457					0.009925448553985916
VDEDTLPG	8	Unmodified	_VDEDTLPG_					0	0	0			REV__ENST00000592491.1_3_19:5789163-5789688:-|nuORF	REV__ENST00000592491.1_3_19:5789163-5789688:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	423.2001037597656	2	423.19799	844.381428	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.11	1	18.032	17.532	18.532	-0.078943								0	0	0	0.29568	1	291	291		35.201	14.719	1		+		60419	29214	40336	40352	68458	68458					-0.046987663984623396
VDEEGHEMCCT	11	Unmodified	_VDEEGHEMCCT_					0	0	0			REV__nc|ENSG00000026751|Q9NQ25-7|SLAMF7	REV__nc|ENSG00000026751|Q9NQ25-7|SLAMF7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.7189331054688	2	626.717581	1251.42061	0.60379	0.00037841	3.5267	0.0022103	4.1305	0.0025887	626.7196598761815	23.546	0.59087	23.496	23.255	23.846	-0.049166					39	22	2	0	0	0	0.7342	1	783	783		25.574	1.0549	1	39694	+		60420	16262	40337	40353	68459	68459					-0.19504493493059272
VDEPLIWLR	9	Unmodified	_VDEPLIWLR_					0	0	0			REV__ENST00000075120.11_1_12:8088723-8088801:-|nuORF	REV__ENST00000075120.11_1_12:8088723-8088801:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.82470703125	2	570.824224	1139.63389	0.51778	0.00029556	-0.34598	-0.0001975	0.1718	9.8065E-05	570.8238767890401	61.345	0.78047	61.464	61.349	62.129	0.11901					67	35	2	0	0	0	0.78983	1	5360	5360		27.882	2.3082	1	786490	+		60421	24073	40338	40354	68460	68460					0.06966291402750358
VDEPPLFLL	9	Unmodified	_VDEPPLFLL_					0	0	0		nc|ENSG00000071991|Q9H159-2|CDH19;ENSG00000071991|ENST00000262150|CDH19	nc|ENSG00000071991|Q9H159-2|CDH19	nc|ENSG00000071991|Q9H159-2|CDH19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.792724609375	2	521.794601	1041.57465	0.0019991	1.0431E-06	-3.6105	-0.0018839	-3.6085	-0.0018829	521.7925613715433	78.41	0.88516	78.973	78.659	79.544	0.56332					42	20	3	0	0	0	0.67235	1	8970	8970		42.474	1.6963	1	817570			60422	1265	40339	40355	68461	68461					0.05552395388554032
VDEPTRPIY	9	Unmodified	_VDEPTRPIY_					0	0	0		ENSG00000173546|ENST00000308508|CSPG4	ENSG00000173546|ENST00000308508|CSPG4	ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.2823486328125	2	545.282389	1088.55022	0.3365	0.00018349	-0.21842	-0.0001191	0.11808	6.4388E-05	545.2821272207177	51.057	1.7565	51.065	50.722	52.479	0.0077438					123	48	5	0	0	0	0.71772	1	4438	4438		39.253	2.0937	1	2866500			60423	6866	40340	40356	68462	68462					0.009491352350551097
VDESDLRVI	9	Unmodified	_VDESDLRVI_					0	0	0		ENST00000464118.2_1_19:30447279-30447516:-|nuORF	ENST00000464118.2_1_19:30447279-30447516:-|nuORF	ENST00000464118.2_1_19:30447279-30447516:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2827758789062	2	523.279846	1044.54514	0.99679	0.0005216	2.9052	0.0015203	3.902	0.0020419	523.2810416733992	96.769	0.74119	97.166	96.827	97.568	0.39691					31	17	2	0	0	0	0.44421	1	11644	11644		54.776	11.912	1	317410			60424	12083	40341	40357	68463	68463					0.02464831372435583
VDESDLRVI	9	Unmodified	_VDESDLRVI_					0	0	0		ENST00000464118.2_1_19:30447279-30447516:-|nuORF	ENST00000464118.2_1_19:30447279-30447516:-|nuORF	ENST00000464118.2_1_19:30447279-30447516:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	523.279846	1044.54514	1.9317	0.0010108	1.9007	0.00099462	3.8324	0.0020054	523.280592288056	96.55	0.94306	96.955	96.674	97.617	0.40498	-0.10544	-0.00055379	NaN	54.776	43	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	319290			60425	12083	40341	40357							0.02464831372435583
VDFQELGW	8	Unmodified	_VDFQELGW_					0	0	0		ENSG00000139269|ENST00000266646|INHBE;ENST00000551553.1_1_12:57846273-57850628:+|nuORF	ENSG00000139269|ENST00000266646|INHBE	ENSG00000139269|ENST00000266646|INHBE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.23614501953125	2	497.23745	992.460347	-0.19864	-9.8772E-05	-3.8021	-0.0018906	-4.0008	-0.0019893	497.23537485452226	30.419	0.8618	30.372	30.011	30.873	-0.047064					55	21	4	0	0	0	0.92457	1	1680	1680		47.916	10.104	1	283960			60426	4357	40342	40358	68464	68464					-0.03618494373517933
VDFQNVLEDF	10	Unmodified	_VDFQNVLEDF_					0	0	0		ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3	ENSG00000133657|ENST00000645319|ATP13A3	ENSG00000133657|ENST00000645319|ATP13A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	613.2904663085938	2	613.290411	1224.56627	-0.38521	-0.00023625	0.83707	0.00051337	0.45186	0.00027712	613.290841465229	62.778	1.1508	62.772	62.454	63.605	-0.0055504					134	54	4	0	0	0	0.82886	1	5854	5854		37.812	0	1	912360			60427	3887	40343	40359	68465	68465					-0.03703203318718806
VDFSIMGG	8	Unmodified	_VDFSIMGG_					0	0	0			REV__ENST00000482178.5_1_22:41973324-41980100:-|nuORF	REV__ENST00000482178.5_1_22:41973324-41980100:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1939392089844	2	413.194196	824.37384	-1.8193	-0.00075172	0.10384	4.2906E-05	-1.7155	-0.00070882	413.19449532095985	85.285	2.7275	85.47	84.411	87.139	0.18523					148	63	4	0	0	0	0.88915	1	8311	8311		35.201	3.2459	1	1914300	+		60428	17192	40344	40360	68466	68466					-0.04537197199726961
VDFSIMGG	8	Unmodified	_VDFSIMGG_					0	0	0			REV__ENST00000482178.5_1_22:41973324-41980100:-|nuORF	REV__ENST00000482178.5_1_22:41973324-41980100:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.19403076171875	2	413.194196	824.37384	-0.094873	-3.9201E-05	-1.7383	-0.00071825	-1.8331	-0.00075745	413.1937900034763	84.315	3.1314	84.763	83.717	86.848	0.44736					207	76	5	0	0	0	0.82464	1	9986	9986		21.702	1.2205	1	10183000	+		60429	17192	40344	40360	68467	68467					-0.04537197199726961
VDGCYCPN	8	Unmodified	_VDGCYCPN_					0	0	0		ENSG00000188162|ENST00000399397|OTOG;nc|ENSG00000188162|Q6ZRI0|OTOG	ENSG00000188162|ENST00000399397|OTOG	ENSG00000188162|ENST00000399397|OTOG	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	435.659664	869.304774	-0.94423	-0.00041136	-3.3819	-0.0014734	-4.3262	-0.0018847	435.65791641686917	63.279	0.12738	63.302	63.235	63.363	0.022984					7	5	2	0	0	0	0.4196	1	5534	5534		7.1934	0	1	43924			60430	7911	40345	40361	68468	68468					-0.13510604490966216
VDGTTFTPGY	10	Unmodified	_VDGTTFTPGY_					0	0	0			REV__ENSG00000010017|ENST00000011619|RANBP9;REV__ENST00000602506.5_1_16:67760333-67793575:-|nuORF	REV__ENST00000602506.5_1_16:67760333-67793575:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.2476806640625	2	529.245472	1056.47639	0.039178	2.0735E-05	2.8422	0.0015042	2.8814	0.001525	529.2469672779198	66.89	0.29681	66.854	66.718	67.015	-0.035698					15	11	2	0	0	0	0.84112	1	6410	6410		37.159	1.9584	1	77235	+		60431	19661;16155	40346	40362	68469	68469					-0.049588329272637566
VDGVLLVVL	9	Unmodified	_VDGVLLVVL_					0	0	0		ENSG00000139718|ENST00000604567|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;ENSG00000139718.11,SETD1B,chr12,+,I12.1,121823750,121825199|13|12.37|3|intron	ENSG00000139718|ENST00000604567|SETD1B	ENSG00000139718|ENST00000604567|SETD1B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.79974365234375	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	1	2884	2884		12.207	0	1	489490			60432	4392	40347	40363	68470	68470					0.11905003113804469
VDGVQLRH	8	Unmodified	_VDGVQLRH_					0	0	0			REV__ENSG00000224470|ENST00000427980|ATXN1L	REV__ENSG00000224470|ENST00000427980|ATXN1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	462.2557067871094	2	462.256508	922.498464	-1.1479	-0.0005306	-0.43284	-0.00020008	-1.5807	-0.00073069	462.2561316010427	50.7	0.93532	50.73	50.218	51.154	0.029629					48	30	3	0	0	0	0.85277	1	3993	3993		25.45	0	1	309990	+		60433	23734	40348	40364	68471	68471					0.03411436331816731
VDGVWRRSA	9	Unmodified	_VDGVWRRSA_					0	0	0		ENST00000448963.5_1_10:91598703-91598907:+|nuORF	ENST00000448963.5_1_10:91598703-91598907:+|nuORF	ENST00000448963.5_1_10:91598703-91598907:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3032836914062	2	523.280515	1044.54648	0.69612	0.00036427	3.3227	0.0017387	4.0189	0.002103	523.2816789271565	86.413	0.25599	86.562	86.485	86.741	0.14902					6	5	2	0	0	0	0.20789	1	8511	8511		34.173	11.13	1	17209			60434	11867	40349	40365	68472	68472					0.02598510251868902
VDHKTKKLLPW	11	Unmodified	_VDHKTKKLLPW_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.6091003417969	3	455.606478	1363.79761	-0.20528	-9.3526E-05	4.4259	0.0020165	4.2206	0.0019229	455.6084327399236	68.63	2.9876	69.015	67.085	70.073	0.38482					195	78	4	0	0	0	0.76579	1	7336	7336		18.531	5.0231	1	1835000			60435	2259	40350	40366	68473	68473					0.13025889173673022
VDIDAIRR	8	Unmodified	_VDIDAIRR_					0	0	0		nc|ENSG00000114062|Q05086-2|UBE3A;ENSG00000114062|ENST00000648336|UBE3A;nc|ENSG00000114062|Q05086|UBE3A	nc|ENSG00000114062|Q05086-2|UBE3A	nc|ENSG00000114062|Q05086-2|UBE3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2773742675781	2	479.277441	956.540328	0.53004	0.00025403	-0.7863	-0.00037685	-0.25626	-0.00012282	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.88601	1	8461	8461		34.173	3.6689	1	2070000			60436	2760	40351	40367	68474	68474					0.06031992020314192
VDIIKGLFFP	10	Unmodified	_VDIIKGLFFP_					0	0	0			REV__ENSG00000135776|ENST00000344517|ABCB10	REV__ENSG00000135776|ENST00000344517|ABCB10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.3070068359375	2	574.839342	1147.66413	0.27145	0.00015604	-0.7069	-0.00040635	-0.43544	-0.00025031	575.3391827913966	33.723	0.17263	33.832	33.769	33.942	0.10829					9	7	2	0	0	0	0.37624	1	1663	1663		27.882	3.6795	1	30279	+		60437	19250	40352	40368	68475	68475					0.0962065006795001
VDIISGIVI	9	Unmodified	_VDIISGIVI_					0	0	0			REV__ENSG00000081248|ENST00000362061|CACNA1S;REV__nc|ENSG00000151067|Q13936-17|CACNA1C;REV__nc|ENSG00000157388|Q01668-2|CACNA1D	REV__ENSG00000081248|ENST00000362061|CACNA1S	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.790771484375	2	464.789318	927.564084	-0.072724	-3.3801E-05	3.0915	0.0014369	3.0188	0.0014031	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.7932	1	2168	2168		25.45	0	1	297050	+		60438	16822;29929;29952	40353	40369	68476	68476					0.09740412734140591
VDINKNMLL	9	Unmodified	_VDINKNMLL_					0	0	0			REV__ENST00000448644.2_1_6:133055390-133055831:-|nuORF	REV__ENST00000448644.2_1_6:133055390-133055831:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2978515625	2	530.296985	1058.57942	-0.56621	-0.00030026	3.2959	0.0017478	2.7296	0.0014475	530.2982562988576	59.965	0.69888	60.518	60.119	60.818	0.55323					36	18	3	0	0	0	0.25483	1	6368	6368		68.787	7.8149	1	1040200	+		60439	26842	40354	40370	68477	68477					0.05246956259702529
VDIPPLMR	8	Unmodified	_VDIPPLMR_					0	0	0		nc|ENSG00000145348|Q8TEA7-3|TBCK;ENSG00000145348|ENST00000394708|TBCK;ENST00000510927.5_1_4:106967729-107168455:-|nuORF;nc|ENSG00000145348|Q8TEA7-2|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76873779296875	2	470.767863	939.521173	-1.6002	-0.00075333	4.0064	0.0018861	2.4062	0.0011328	470.76963211493467	52.958	1.5723	52.958	52.572	54.144	0					106	44	3	0	0	0	0.92973	1	4349	4349		50.025	7.5501	1	1490800			60440	4762	40355	40371	68478	68478					0.04899319405069491
VDIPPLMR	8	Unmodified	_VDIPPLMR_					0	0	0		nc|ENSG00000145348|Q8TEA7-3|TBCK;ENSG00000145348|ENST00000394708|TBCK;ENST00000510927.5_1_4:106967729-107168455:-|nuORF;nc|ENSG00000145348|Q8TEA7-2|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.7688903808594	2	470.767863	939.521173	0.3438	0.00016185	1.592	0.00074944	1.9357	0.00091129	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.92973	1	4321	4321		50.025	0	1	1863100			60441	4762	40355	40371	68479	68479					0.04899319405069491
VDIPPLMR	8	Unmodified	_VDIPPLMR_					0	0	0		nc|ENSG00000145348|Q8TEA7-3|TBCK;ENSG00000145348|ENST00000394708|TBCK;ENST00000510927.5_1_4:106967729-107168455:-|nuORF;nc|ENSG00000145348|Q8TEA7-2|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7690124511719	2	470.767863	939.521173	-0.4699	-0.00022121	2.4838	0.0011693	2.0139	0.00094809	470.768898093518	52.94	1.6168	52.866	52.471	54.088	-0.074509					101	42	3	0	0	0	0.92457	1	4313	4313		47.916	0	1	1875900			60442	4762	40355	40371	68480	68480					0.04899319405069491
VDIPPLMR	8	Unmodified	_VDIPPLMR_					0	0	0		nc|ENSG00000145348|Q8TEA7-3|TBCK;ENSG00000145348|ENST00000394708|TBCK;ENST00000510927.5_1_4:106967729-107168455:-|nuORF;nc|ENSG00000145348|Q8TEA7-2|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76934814453125	2	470.767863	939.521173	-0.38205	-0.00017986	3.0519	0.0014368	2.6699	0.0012569	470.769153299195	81.635	1.0784	82.062	81.671	82.749	0.42646					51	26	2	0	0	0	0.92457	1	9400	9400		47.916	0	1	1307200			60443	4762	40355	40371	68481	68481					0.04899319405069491
VDIPPLMR	8	Unmodified	_VDIPPLMR_					0	0	0		nc|ENSG00000145348|Q8TEA7-3|TBCK;ENSG00000145348|ENST00000394708|TBCK;ENST00000510927.5_1_4:106967729-107168455:-|nuORF;nc|ENSG00000145348|Q8TEA7-2|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	nc|ENSG00000145348|Q8TEA7-3|TBCK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7685546875	2	470.767863	939.521173	-0.58113	-0.00027358	3.376	0.0015893	2.7948	0.0013157	470.76930204103803	81.63	1.1182	82.13	81.661	82.779	0.49967					51	27	2	0	0	0	0.92973	1	9458	9458		50.025	0	1	1330700			60444	4762	40355	40371	68482	68482					0.04899319405069491
VDKHTGKR	8	Unmodified	_VDKHTGKR_					0	0	0			REV__chr19:49361906-49374717|62|34.37|0.19|7.5|+|ENST00000594268|DKKL1,DKKL1	REV__chr19:49361906-49374717|62|34.37|0.19|7.5|+|ENST00000594268|DKKL1,DKKL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7693786621094	2	470.769783	939.525013	-0.039118	-1.8416E-05	-1.6086	-0.0007573	-1.6478	-0.00077572	470.76888428229023	53.107	1.8265	53.104	52.614	54.44	-0.0033035					119	53	3	0	0	0	0.89043	1	4728	4728		35.618	10.168	1	1606400	+		60445	15717	40356	40372	68483	68483					0.05283125223149909
VDKKASRWLIK	11	Unmodified	_VDKKASRWLIK_					0	0	0			REV__nc|ENSG00000146414|Q149N8-4|SHPRH	REV__nc|ENSG00000146414|Q149N8-4|SHPRH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.6088562011719	3	448.610111	1342.8085	-1.2776	-0.00057316	-0.41856	-0.00018777	-1.6962	-0.00076093	448.94413867923083	73.921	0.80068	74.309	73.983	74.784	0.38779					42	19	3	0	0	0	0.75121	1	8341	8341		21.78	1.4654	1	382160	+		60446	20015	40357	40373	68484	68484					0.15081291547926412
VDKNKLSYI	9	Unmodified	_VDKNKLSYI_					0	0	0			REV__ENSG00000172464|ENST00000544374|OR5AP2	REV__ENSG00000172464|ENST00000544374|OR5AP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.310546875	2	540.308406	1078.60226	0.052439	2.8333E-05	0.56447	0.00030499	0.61691	0.00033332	540.3083029892676	74.824	0.59243	74.949	74.623	75.216	0.12545					33	15	3	0	0	0	0.55097	1	6937	6937		49.442	1.7842	1	129190	+		60447	21833	40358	40374	68485	68485					0.06610298648797652
VDKNSNEY	8	Unmodified	_VDKNSNEY_					0	0	0		nc|ENSG00000245848|P49715-4|CEBPA;nc|ENSG00000245848|P49715-3|CEBPA;nc|ENSG00000245848|P49715-2|CEBPA;ENSG00000245848|ENST00000498907|CEBPA	nc|ENSG00000245848|P49715-4|CEBPA	nc|ENSG00000245848|P49715-4|CEBPA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.71832275390625	2	484.719621	967.42469	1.6171	0.00078385	-4.4441	-0.0021542	-2.827	-0.0013703	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.91472	1	11675	11675		44.117	1.6423	1	7541600			60448	15284	40359	40375	68486	68486					-0.06032576621191765
VDKNSNEY	8	Unmodified	_VDKNSNEY_					0	0	0		nc|ENSG00000245848|P49715-4|CEBPA;nc|ENSG00000245848|P49715-3|CEBPA;nc|ENSG00000245848|P49715-2|CEBPA;ENSG00000245848|ENST00000498907|CEBPA	nc|ENSG00000245848|P49715-4|CEBPA	nc|ENSG00000245848|P49715-4|CEBPA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7183837890625	2	484.719621	967.42469	1.0671	0.00051723	-3.9124	-0.0018964	-2.8453	-0.0013792	484.7176617572381	98.724	3.8762	99.101	95.623	99.499	0.37679					186	94	2	0	0	0	0.88601	1	11680	11680		34.173	0.65696	1	7522200			60449	15284	40359	40375	68487	68487					-0.06032576621191765
VDKRFYIQ	8	Unmodified	_VDKRFYIQ_					0	0	0			REV__nc|ENSG00000135049|Q9UPW5-2|AGTPBP1	REV__nc|ENSG00000135049|Q9UPW5-2|AGTPBP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.7955322265625	2	534.795466	1067.57638	0.59521	0.00031832	-0.77429	-0.00041409	-0.17908	-9.5774E-05	534.7950640393225	57.999	0.80846	57.969	57.623	58.432	-0.029865					44	20	3	0	0	0	0.89043	1	5402	5402		35.618	0	1	254230	+		60450	19185	40360	40376	68488	68488					0.045294491971844764
VDKTHGVFRR	10	Unmodified	_VDKTHGVFRR_					0	0	0			REV__ENST00000502890.5_1_5:180667315-180668686:-|nuORF	REV__ENST00000502890.5_1_5:180667315-180668686:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.564208984375	3	405.563273	1213.66799	-0.19603	-7.9504E-05	3.7734	0.0015303	3.5773	0.0014508	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.8651	1	6020	6020		24.232	0.71747	1	328790	+		60451	23511	40361	40377	68489	68489					0.06970132614378599
VDLENEEPDS	10	Unmodified	_VDLENEEPDS_					0	0	0		ENSG00000163482|ENST00000295709|STK36;nc|ENSG00000163482|Q9NRP7-2|STK36	ENSG00000163482|ENST00000295709|STK36	ENSG00000163482|ENST00000295709|STK36	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8182983398438	2	573.74349	1145.47243	-0.71597	-0.00041078	-1.6704	-0.00095838	-2.3864	-0.0013692	574.2441424367704	35.995	0.36776	36.004	35.843	36.211	0.0092773					11	7	2	0	0	0	0.37624	1	2302	2302		21.686	10.82	1	33955			60452	5805	40362	40378	68490	68490					-0.09448967211642412
VDLIFLCM	8	Unmodified	_VDLIFLCM_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.24761962890625	2	477.245375	952.476197	-0.88369	-0.00042174	3.161	0.0015086	2.2774	0.0010869	477.24693641483543	64.828	2.6891	65.382	64.729	67.418	0.55386					152	75	5	0	0	0	0.9159	1	7141	7141		44.531	2.0566	1	2295100			60453	1741	40363	40379	68491	68491					-0.001942474524867066
VDLKCLHI	8	Unmodified	_VDLKCLHI_					0	0	0		ENST00000310078.12_1_2:228421145-228421229:+|nuORF	ENST00000310078.12_1_2:228421145-228421229:+|nuORF	ENST00000310078.12_1_2:228421145-228421229:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.7682800292969	2	470.767863	939.521173	-0.4699	-0.00022121	2.4838	0.0011693	2.0139	0.00094809	470.768898093518	52.94	1.6168	52.866	52.471	54.088	-0.074509					101	42	3	0	0	0	0.90465	1	4413	4413		40.573	5.3719	1	1875900			60454	9906	40364	40380	68492	68492					0.04899319405069491
VDLLALLLG	9	Unmodified	_VDLLALLLG_					0	0	0		ENST00000409104.7_1_9:131447369-131447474:+|nuORF	ENST00000409104.7_1_9:131447369-131447474:+|nuORF	ENST00000409104.7_1_9:131447369-131447474:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.80120849609375	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	2952	2952		18.324	0	1	942760			60455	11298	40365	40381	68493	68493					0.11905003113815837
VDLLALLLG	9	Unmodified	_VDLLALLLG_					0	0	0		ENST00000409104.7_1_9:131447369-131447474:+|nuORF	ENST00000409104.7_1_9:131447369-131447474:+|nuORF	ENST00000409104.7_1_9:131447369-131447474:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.7992858886719	2	463.799686	925.584819	-1.7032	-0.00078997	2.9558	0.0013709	1.2525	0.00058091	463.8008996094523	40.729	0.89679	41.318	40.908	41.805	0.58916					67	25	3	0	0	0	0.7932	1	3533	3533		12.207	0.69583	1	5530000			60456	11298	40365	40381	68494	68494					0.11905003113815837
VDLLGVAH	8	Unmodified	_VDLLGVAH_					0	0	0		nc|ENSG00000244731|P0C0L4-2|C4A;ENSG00000244731|ENST00000428956|C4A	nc|ENSG00000244731|P0C0L4-2|C4A	nc|ENSG00000244731|P0C0L4-2|C4A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.76708984375	2	412.237253	822.459953	1.0654	0.00043919	-3.4781	-0.0014338	-2.4127	-0.0009946	412.23398154613625	36.833	0.20876	37.319	37.242	37.451	0.48581					5	4	2	0	0	0	0.4196	1	2925	2925		13.775	4.953	1	16162			60457	8825	40366	40382	68495	68495					0.04162130697284283
VDLLKSTFLK	10	Unmodified	_VDLLKSTFLK_					0	0	0			REV__nc|ENSG00000117595|O14896-2|IRF6	REV__nc|ENSG00000117595|O14896-2|IRF6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3531494140625	2	582.355357	1162.69616	0.15817	9.2113E-05	-3.4182	-0.0019906	-3.26	-0.0018985	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.86218	1	11511	11511		32.812	3.6424	1	78004000	+		60458	18270	40367	40383	68496	68496					0.1213201775105972
VDLLLSYT	8	Unmodified	_VDLLLSYT_					0	0	0			REV__nc|ENSG00000166889|Q86TB9-2|PATL1	REV__nc|ENSG00000166889|Q86TB9-2|PATL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	462.258056640625	2	462.257851	922.501149	-0.47911	-0.00022147	-4.073	-0.0018828	-4.5521	-0.0021043	462.25574193935563	55.189	1.0474	55.163	54.613	55.66	-0.025955					42	28	2	0	0	0	0.884	1	4976	4976		33.516	1.5607	1	333210	+		60459	21335	40368	40384	68497	68497					0.036798469460904926
VDLLPTRFW	9	Unmodified	_VDLLPTRFW_					0	0	0		ENST00000439943.5_1_20:42839629-42843553:+|nuORF	ENST00000439943.5_1_20:42839629-42843553:+|nuORF	ENST00000439943.5_1_20:42839629-42843553:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.8150024414062	2	573.818941	1145.62333	-0.97824	-0.00056133	-2.5243	-0.0014485	-3.5025	-0.0020098	573.8173526774345	36.242	1.264	36.223	35.602	36.866	-0.018673					63	27	4	0	0	0	0.41566	1	2287	2287		56.721	1.2168	1	601960			60460	11767	40369	40385	68498	68498					0.0563430874833557
VDLLPTRFW	9	Unmodified	_VDLLPTRFW_					0	0	0		ENST00000439943.5_1_20:42839629-42843553:+|nuORF	ENST00000439943.5_1_20:42839629-42843553:+|nuORF	ENST00000439943.5_1_20:42839629-42843553:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	573.8173217773438	2	573.818941	1145.62333	0.47187	0.00027077	-3.8915	-0.002233	-3.4196	-0.0019622	573.8166375827257	36.087	1.0388	36.026	35.489	36.528	-0.060337					75	29	4	0	0	0	0.67345	1	1992	1992		42.396	1.8235	1	912290			60461	11767	40369	40385	68499	68499					0.0563430874833557
VDLLYVKG	8	Unmodified	_VDLLYVKG_					0	0	0			REV__nc|ENSG00000006715|P49754-2|VPS41	REV__nc|ENSG00000006715|P49754-2|VPS41	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	453.7655029296875	2	453.768386	905.522219	-1.8474	-0.00083831	-4.0327	-0.0018299	-5.8802	-0.0026682	453.76663563247314	42.146	1.7379	42.146	41.766	43.504	0					90	42	4	0	0	0	0.67263	1	2872	2872		68.485	16.186	1	323540	+		60462	16111	40370	40386	68500	68500					0.06567857045627079
VDLPEAALL	9	Unmodified	_VDLPEAALL_					0	0	0			REV__ENSG00000182103|ENST00000329203|FAM181B	REV__ENSG00000182103|ENST00000329203|FAM181B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7689208984375	2	470.771126	939.527698	-0.65478	-0.00030825	-3.7351	-0.0017584	-4.3899	-0.0020666	470.7692226833795	80.078	1.5697	80.605	79.423	80.992	0.52676					81	36	3	0	0	0	0.64922	1	9152	9152		44.117	6.9577	1	1102700	+		60463	22500	40371	40387	68501	68501					0.05551535837423671
VDLSHIPLK	9	Unmodified	_VDLSHIPLK_					0	0	0		ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2867736816406	2	511.305667	1020.59678	-0.92539	-0.00047316	1.231	0.00062941	0.30559	0.00015625	511.8087124364539	42.015	0.20541	41.976	41.855	42.061	-0.038223					6	4	2	0	0	0	0.10868	1	3212	3212		113.41	5.3241	1	24150			60464	2594	40372	40388	68502	68502					0.08730619857010424
VDLSVHVRRI	10	Unmodified	_VDLSVHVRRI_					0	0	0		nc|ENSG00000129003|Q709C8-2|VPS13C;ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;ENST00000558338.1_1_15:62199375-62209725:-|nuORF	nc|ENSG00000129003|Q709C8-2|VPS13C	nc|ENSG00000129003|Q709C8-2|VPS13C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.3666381835938	2	597.359296	1192.70404	-1.2979	-0.00077532	-0.78886	-0.00047123	-2.0868	-0.0012466	597.3583970456502	100.18	2.7493	100.35	98.666	101.42	0.17199					156	64	4	0	0	0	0.8651	1	10498	10498		25.574	2.9944	1	2737400			60465	3570	40373	40389	68503	68503					0.11539589791232174
VDLTKPYQN	9	Unmodified	_VDLTKPYQN_					0	0	0		ENSG00000107771|ENST00000372088|CCSER2;nc|ENSG00000107771|Q9H7U1-2|CCSER2;nc|ENSG00000107771|Q9H7U1|CCSER2	ENSG00000107771|ENST00000372088|CCSER2	ENSG00000107771|ENST00000372088|CCSER2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.2798461914062	2	539.282389	1076.55022	-0.025946	-1.3992E-05	-1.3086	-0.0007057	-1.3345	-0.00071969	539.2814842127906	41.019	0.63779	41.023	40.753	41.391	0.0043983					55	23	3	0	0	0	0.55097	1	2668	2668		49.442	0	1	583750			60466	2367	40374	40390	68504	68504					0.01501135235048423
VDLVHGQR	8	Unmodified	_VDLVHGQR_					0	0	0			REV__ENST00000451644.5_1_2:12147350-12246954:+|nuORF	REV__ENST00000451644.5_1_2:12147350-12246954:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	462.25537109375	2	462.256508	922.498464	-0.47911	-0.00022147	-1.1684	-0.00054012	-1.6475	-0.00076159	462.25574193935563	55.189	1.0474	55.163	54.613	55.66	-0.025955					42	28	2	0	0	0	0.84634	1	5021	5021		60.294	5.5176	1	333210	+		60467	26886	40375	40391	68505	68505					0.03411436331816731
VDLVLIIAA	9	Unmodified	_VDLVLIIAA_					0	0	0		ENSG00000147606|ENST00000276609|SLC26A7;nc|ENSG00000147606|Q8TE54-2|SLC26A7	ENSG00000147606|ENST00000276609|SLC26A7	ENSG00000147606|ENST00000276609|SLC26A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8005065917969	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	3103	3103		17.365	4.4058	1	1231300			60468	4915	40376	40392	68506	68506					0.11905003113804469
VDLVLIIAA	9	Unmodified	_VDLVLIIAA_					0	0	0		ENSG00000147606|ENST00000276609|SLC26A7;nc|ENSG00000147606|Q8TE54-2|SLC26A7	ENSG00000147606|ENST00000276609|SLC26A7	ENSG00000147606|ENST00000276609|SLC26A7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.79986572265625	2	463.799686	925.584819	-0.080206	-3.7199E-05	1.9522	0.00090541	1.8719	0.00086821	463.80040731335265	41.41	1.3196	41.365	40.954	42.273	-0.045467					80	38	3	0	0	0	0.7932	1	2718	2718		19.36	6.4008	1	417210			60469	4915	40376	40392	68507	68507					0.11905003113804469
VDLVLTLPA	9	Unmodified	_VDLVLTLPA_					0	0	0		nc|ENSG00000152582|Q9C093-4|SPEF2	nc|ENSG00000152582|Q9C093-4|SPEF2	nc|ENSG00000152582|Q9C093-4|SPEF2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.79107666015625	2	470.789318	939.564084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.123	1	40.132	39.632	40.632	0.0092773								0	0	0	0.30053	1	2865	2865		30.504	3.7075	1				60470	14996	40377	40393	68508	68508					0.09188412734135909
VDLVRANH	8	Unmodified	_VDLVRANH_					0	0	0			REV__nc|ENSG00000132950|Q9UJ78-1|ZMYM5	REV__nc|ENSG00000132950|Q9UJ78-1|ZMYM5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.25537109375	2	462.256508	922.498464	-0.66018	-0.00030517	-1.031	-0.00047661	-1.6912	-0.00078178	462.25599733554526	52.52	1.5182	52.944	52.318	53.836	0.42348					74	36	3	0	0	0	0.90465	1	5230	5230		40.573	3.4135	1	3176800	+		60471	29849	40378	40394	68509	68509					0.03411436331805362
VDMVKVRC	8	Unmodified	_VDMVKVRC_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	475.2520446777344	2	475.251523	948.488493	-0.30594	-0.0001454	0.73519	0.0003494	0.42926	0.00020401	475.2517597895857	20.234	0.54551	20.164	19.955	20.501	-0.069733					38	21	3	0	0	0	0.86288	1	501	501		26.796	0	1	125520	+		60472	20437;29946	40379	40395	68510	68510					0.012187890105678889
VDNCKKLGLVF	11	Unmodified	_VDNCKKLGLVF_					0	0	0		ENST00000476047.1_1_3:76483919-76484456:+|nuORF;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1;ENSG00000131236|ENST00000372805|CAP1	ENST00000476047.1_1_3:76483919-76484456:+|nuORF	ENST00000476047.1_1_3:76483919-76484456:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.345703125	2	618.344466	1234.67438	-0.32375	-0.00020019	2.6984	0.0016685	2.3747	0.0014684	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.67778	1	10396	10396		35.152	3.5178	1	926440			60473	3720	40380	40396	68511	68511					0.06642889730846946
VDNCKKLGLVF	11	Unmodified	_VDNCKKLGLVF_					0	0	0		ENST00000476047.1_1_3:76483919-76484456:+|nuORF;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1;ENSG00000131236|ENST00000372805|CAP1	ENST00000476047.1_1_3:76483919-76484456:+|nuORF	ENST00000476047.1_1_3:76483919-76484456:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	618.34619140625	2	618.344466	1234.67438	0.55169	0.00034113	1.7728	0.0010962	2.3245	0.0014373	618.3454418699644	97.724	3.0702	97.772	96.827	99.897	0.048157					199	71	4	0	0	0	0.61369	1	10487	10487		42.864	1.4377	1	831610			60474	3720	40380	40396	68512	68512					0.06642889730846946
VDNCKKLGLVF	11	Unmodified	_VDNCKKLGLVF_					0	0	0		ENST00000476047.1_1_3:76483919-76484456:+|nuORF;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1;ENSG00000131236|ENST00000372805|CAP1	ENST00000476047.1_1_3:76483919-76484456:+|nuORF	ENST00000476047.1_1_3:76483919-76484456:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	618.346435546875	2	618.344466	1234.67438	-1.2296	-0.00076029	3.5766	0.0022115	2.347	0.0014513	618.3465539597456	97.787	3.3462	97.982	96.915	100.26	0.19585					219	77	4	0	0	0	0.66929	1	10061	10061		36.447	3.6343	1	806570			60475	3720	40380	40396	68513	68513					0.06642889730846946
VDNGLVICALS	11	Unmodified	_VDNGLVICALS_					0	0	0			REV__ENSG00000151687|ENST00000684021|ANKAR	REV__ENSG00000151687|ENST00000684021|ANKAR	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.2918090820312	2	552.291899	1102.56925	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.963	1	67.963	67.463	68.463	0								0	0	0	0.56276	1	6023	6023		41.427	4.9799	1		+		60476	20264	40381	40397	68514	68514					0.022063485344460787
VDNKMLDDLY	10	Unmodified	_VDNKMLDDLY_					0	0	0		ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	613.290771484375	2	613.292096	1224.56964	-0.38521	-0.00023625	-1.9111	-0.001172	-2.2963	-0.0014083	613.290841465229	62.778	1.1508	62.772	62.454	63.605	-0.0055504					134	54	4	0	0	0	0.21786	2	5845	5825;5845		82.241	9.3613	1	912360			60477	3846	40382	40398	68515;68516	68516					-0.03366276536348778
VDNKMLDDLY	10	Unmodified	_VDNKMLDDLY_					0	0	0		ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	613.2904663085938	2	613.292096	1224.56964	0.24067	0.0001476	-2.5086	-0.0015385	-2.2679	-0.0013909	613.2904502494944	62.697	1.1509	62.663	62.242	63.393	-0.03371					143	54	4	0	0	0	0.21786	2	5930	5930;5938		82.241	4.9229	1	929510			60478	3846	40382	40398	68517;68518	68517					-0.03366276536348778
VDNMTKLVL	9	Unmodified	_VDNMTKLVL_					0	0	0		ENST00000468511.5_1_6:2833828-2838227:-|nuORF;nc|ENSG00000021355|P30740-2|SERPINB1;ENSG00000021355|ENST00000380739|SERPINB1	ENST00000468511.5_1_6:2833828-2838227:-|nuORF	ENST00000468511.5_1_6:2833828-2838227:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7930908203125	2	516.791535	1031.56852	0.68918	0.00035616	2.8454	0.0014705	3.5346	0.0018266	516.7928457935418	86.219	2.6893	86.368	84.865	87.554	0.14902					141	62	3	0	0	0	0.76764	1	8585	8585		34.173	6.2903	1	296930			60479	846	40383	40399	68519	68519					0.053995538853769176
VDNRHKAVRKV	11	Unmodified	_VDNRHKAVRKV_					0	0	0			REV__ENST00000415149.6_1_3:107526041-107526149:+|nuORF	REV__ENST00000415149.6_1_3:107526041-107526149:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.9398193359375	3	441.265227	1320.77385	0.60923	0.00026883	3.9615	0.0017481	4.5707	0.0020169	441.2671639286785	55.754	0.22532	55.785	55.728	55.954	0.030838					6	5	2	0	0	0	0.17437	1	5039	5039		20.315	0	1	34942	+		60480	26415	40384	40400	68520	68520					0.12629468459817872
VDNVLLDVT	9	Unmodified	_VDNVLLDVT_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.64910888671875	2	494.27149	986.528426	-1.7864	-0.00088297	0.83384	0.00041214	-0.95257	-0.00047083	494.27170904126757	42.703	0.98441	43.136	42.725	43.71	0.4334					34	23	2	0	0	0	0.20789	1	3778	3778		25.574	1.0549	1	300440	+		60481	21174	40385	40401	68521	68521					0.03462330486490828
VDNWEITTIE	10	Unmodified	_VDNWEITTIE_					0	0	0			REV__CON__Q95M17	REV__CON__Q95M17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	610.2933349609375	2	610.295693	1218.57683	1.0036	0.00061252	-4.1909	-0.0025577	-3.1872	-0.0019452	610.2932239407997	23.127	0.41623	22.553	22.375	22.792	-0.57415					16	10	2	0	0	0	0.86047	1	1010	1010		23.523	1.5628	1	95553	+	+	60482	16028	40386	40402	68522	68522					-0.02371220664304019
VDNWEITTIE	10	Unmodified	_VDNWEITTIE_					0	0	0			REV__CON__Q95M17	REV__CON__Q95M17	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	610.295693	1218.57683	1.0993	0.00067088	-4.8176	-0.0029401	-3.7183	-0.0022692	610.2927409376582	23.069	0.65944	22.65	22.457	23.116	-0.41879	0.04831	-0.00044808	NaN	23.523	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49165	+	+	60483	16028	40386	40402							-0.02371220664304019
VDNWEITTIE	10	Unmodified	_VDNWEITTIE_					0	0	0			REV__CON__Q95M17	REV__CON__Q95M17	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	610.295693	1218.57683	1.0036	0.00061252	-4.1909	-0.0025577	-3.1872	-0.0019452	610.2932239407997	23.127	0.41623	22.553	22.375	22.792	-0.57415	-0.04831	0.00031686	NaN	23.523	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95553	+	+	60484	16028	40386	40402							-0.02371220664304019
VDPAPIVE	8	Unmodified	_VDPAPIVE_					0	0	0			REV__ENST00000595981.5_1_19:58740851-58741773:+|nuORF	REV__ENST00000595981.5_1_19:58740851-58741773:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2249755859375	2	420.229094	838.443634	-0.18786	-7.8944E-05	-2.8091	-0.0011805	-2.997	-0.0012594	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.87922	1	7209	7209		31.955	2.8053	1	279000	+		60485	29254	40387	40403	68523	68523					0.017950047405179248
VDPDSGLEH	9	Unmodified	_VDPDSGLEH_					0	0	0		ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111590511-111591024:+|nuORF	ENSG00000143799|ENST00000366794|PARP1	ENSG00000143799|ENST00000366794|PARP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.71771240234375	2	484.719621	967.42469	1.6171	0.00078385	-4.4441	-0.0021542	-2.827	-0.0013703	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.74721	1	11773	11773		37.159	1.5408	1	7541600			60486	4662	40388	40404	68524	68524					-0.06032576621191765
VDPDTARLT	9	Unmodified	_VDPDTARLT_					0	0	0			REV__ENSG00000166341|ENST00000299441|DCHS1	REV__ENSG00000166341|ENST00000299441|DCHS1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.64910888671875	2	494.258914	986.503274	-1.7769	-0.00087827	-3.0775	-0.0015211	-4.8545	-0.0023994	494.2591253344547	42.702	0.86731	43.135	42.842	43.71	0.4334					27	20	2	0	0	0	0.20789	1	3778	3778		31.53	10.583	1	413920	+		60487	21281	40389	40405	68525	68525					0.009482756838906425
VDPKNYPK	8	Unmodified	_VDPKNYPK_					0	0	0		ENST00000491056.5_1_2:113587940-113590763:-|nuORF;ENSG00000125538|ENST00000263341|IL1B	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.7611083984375	2	480.761092	959.507631	0.74146	0.00035647	-0.47815	-0.00022988	0.26331	0.00012659	480.7606994615689	25.649	1.757	25.392	24.684	26.441	-0.2572					90	39	4	0	0	0	0.36305	4	1343	1319;1331;1343;1355		96.19	16.739	1	2336600			60488	3396	40390	40406	68526;68527;68528;68529	68528					0.026257848974637454
VDPKNYPK	8	Unmodified	_VDPKNYPK_					0	0	0		ENST00000491056.5_1_2:113587940-113590763:-|nuORF;ENSG00000125538|ENST00000263341|IL1B	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	ENST00000491056.5_1_2:113587940-113590763:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.7612609863281	2	480.761092	959.507631	2.0148	0.00096864	-1.8186	-0.00087432	0.1962	9.4325E-05	480.7600911618307	25.68	1.7408	25.249	24.627	26.368	-0.4311					91	39	4	0	0	0	0.28455	4	1357	1324;1345;1357;1369		104.75	28.9	1	2778300			60489	3396	40390	40406	68530;68531;68532;68533	68532					0.026257848974637454
VDPPRGLPGAP	11	Unmodified	_VDPPRGLPGAP_					0	0	0			REV__ENST00000317114.1_1_18:3596827-3597223:+|nuORF	REV__ENST00000317114.1_1_18:3596827-3597223:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.2979125976562	2	538.298373	1074.58219	2.0126	0.0010834	-2.2294	-0.0012001	-0.21685	-0.00011673	538.29703109323	26.01	0.85884	25.579	25.191	26.05	-0.4311					45	19	4	0	0	0	0.33869	1	1413	1413		64.207	5.9773	1	561100	+		60490	24962	40391	40407	68534	68534					0.047885477088584594
VDPQSVGSVI	10	Unmodified	_VDPQSVGSVI_					0	0	0			REV__ENSG00000165490|ENST00000533655|DDIAS	REV__ENSG00000165490|ENST00000533655|DDIAS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	500.7686462402344	2	500.769114	999.523675	-1.002	-0.00050176	1.3121	0.00065706	0.31012	0.0001553	500.7693345833645	38.199	0.65639	38.148	37.806	38.462	-0.050369					26	14	3	0	0	0	0.77314	1	2664	2664		40.778	8.8233	1	106690	+		60491	21187	40392	40408	68535	68535					0.023894463437159175
VDQKSILVE	9	Unmodified	_VDQKSILVE_					0	0	0			REV__nc|ENSG00000148541|Q8NE31-3|FAM13C	REV__nc|ENSG00000148541|Q8NE31-3|FAM13C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2247924804688	2	515.792589	1029.57063	0.4985	0.00025712	0.54299	0.00028007	1.0415	0.00053719	515.7929893348133	51.855	0.60971	52.522	52.271	52.881	0.6673					21	14	2	0	0	0	0.20789	1	5200	5200		35.152	0	1	742630	+		60492	20123	40393	40409	68536	68536					0.057023058948516336
VDQLLQKRKTK	11	Unmodified	_VDQLLQKRKTK_					0	0	0			REV__ENSG00000189401|ENST00000338352|OTUD6A	REV__ENSG00000189401|ENST00000338352|OTUD6A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.3434143066406	3	452.948904	1355.82488	1.167	0.00052861	-1.964	-0.00088961	-0.79701	-0.000361	452.947763155439	106.65	1.4447	106.78	105.7	107.15	0.12742					96	56	3	0	0	0	0.17925	1	12873	12873		15.337	10.195	1	387800	+		60493	23082	40394	40410	68537	68537					0.1612037271402187
VDRHREAQQVL	11	Unmodified	_VDRHREAQQVL_					0	0	0		ENSG00000198483|ENST00000355594|ANKRD35	ENSG00000198483|ENST00000355594|ANKRD35	ENSG00000198483|ENST00000355594|ANKRD35	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.76177978515625	3	450.912742	1349.7164	-1.3441	-0.00060607	4.4588	0.0020105	3.1146	0.0014044	450.9138378442823	36.965	0.53462	36.989	36.83	37.365	0.023624					18	12	2	0	0	0	0.1745	1	2115	2115		23.378	11.446	1	53493			60494	8277	40395	40411	68538	68538					0.055525814635984716
VDRILFLFFL	10	Unmodified	_VDRILFLFFL_					0	0	0		ENST00000434116.6_1_15:65903875-65903989:+|nuORF	ENST00000434116.6_1_15:65903875-65903989:+|nuORF	ENST00000434116.6_1_15:65903875-65903989:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8828125	2	641.881542	1281.74853	1.6835	0.0010806	-0.24094	-0.00015466	1.4425	0.00092593	641.8812254430574	95.773	2.4493	95.82	94.333	96.782	0.046989					202	57	5	0	0	0	0.8608	1	10226	10226		34.173	3.8548	1	1550900			60495	11692	40396	40412	68539	68539					0.11892600884698368
VDRILKEKKH	10	Unmodified	_VDRILKEKKH_					0	0	0			REV__ENSG00000225830|ENST00000355832|ERCC6	REV__ENSG00000225830|ENST00000355832|ERCC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.3858642578125	2	633.388054	1264.76155	-0.12792	-8.1025E-05	-3.7555	-0.0023787	-3.8834	-0.0024597	633.3855992497944	56.952	1.0049	56.939	56.691	57.696	-0.012203					73	35	3	0	0	0	0.86549	1	5137	5137		24.519	1.9395	1	170190	+		60496	23740	40397	40413	68540	68540					0.13976431996798055
VDRILKEKKH	10	Unmodified	_VDRILKEKKH_					0	0	0			REV__ENSG00000225830|ENST00000355832|ERCC6	REV__ENSG00000225830|ENST00000355832|ERCC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.3873901367188	2	633.388054	1264.76155	-0.15105	-9.5672E-05	-3.6645	-0.0023211	-3.8156	-0.0024167	633.3858677964031	58.829	0.87076	58.815	58.288	59.159	-0.013729					44	29	2	0	0	0	0.86014	1	5357	5357		18.262	0	1	53343	+		60497	23740	40397	40413	68541	68541					0.13976431996798055
VDRILKEKKH	10	Unmodified	_VDRILKEKKH_					0	0	0			REV__ENSG00000225830|ENST00000355832|ERCC6	REV__ENSG00000225830|ENST00000355832|ERCC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.3847045898438	2	633.388054	1264.76155	-0.18394	-0.0001165	-4.2182	-0.0026717	-4.4021	-0.0027882	633.3853758780649	57.013	1.0689	57.046	56.666	57.735	0.033184					61	35	2	0	0	0	0.86742	1	5195	5195		16.717	0	1	142320	+		60498	23740	40397	40413	68542	68542					0.13976431996798055
VDRILKEKKH	10	Unmodified	_VDRILKEKKH_					0	0	0			REV__ENSG00000225830|ENST00000355832|ERCC6	REV__ENSG00000225830|ENST00000355832|ERCC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.5930480957031	3	422.594461	1264.76155	-1.8117	-0.0007656	-1.6807	-0.00071027	-3.4924	-0.0014759	422.59357864263933	54.504	2.542	54.559	53.757	56.299	0.055611					235	90	4	0	0	0	0.86802	1	4581	4581		27.047	9.2142	1	1177200	+		60499	23740	40397	40413	68543	68543					0.13976431996798055
VDRILKEKKH	10	Unmodified	_VDRILKEKKH_					0	0	0			REV__ENSG00000225830|ENST00000355832|ERCC6	REV__ENSG00000225830|ENST00000355832|ERCC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.3878173828125	2	633.388054	1264.76155	0.12605	7.984E-05	-4.2714	-0.0027054	-4.1453	-0.0026256	633.3850253113031	51.101	1.496	51.017	50.491	51.987	-0.084538					79	43	3	0	0	0	0.86776	1	4033	4033		21.686	9.4789	1	224090	+		60500	23740	40397	40413	68544	68544					0.13976431996798055
VDRILKEKKH	10	Unmodified	_VDRILKEKKH_					0	0	0			REV__ENSG00000225830|ENST00000355832|ERCC6	REV__ENSG00000225830|ENST00000355832|ERCC6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.22821044921875	3	422.594461	1264.76155	-0.95028	-0.00040158	-3.5675	-0.0015076	-4.5178	-0.0019092	422.5927603550465	62.029	0.45958	62.045	61.737	62.197	0.015724					22	15	2	0	0	0	0.37624	1	5391	5391		17.833	6.1972	1	86128	+		60501	23740	40397	40413	68545	68545					0.13976431996798055
VDRNIRRVT	9	Unmodified	_VDRNIRRVT_					0	0	0		ENSG00000164161|ENST00000296575|HHIP;ENST00000503090.1_1_4:145659010-145659878:+|nuORF	ENSG00000164161|ENST00000296575|HHIP	ENSG00000164161|ENST00000296575|HHIP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	564.3590087890625	2	564.833446	1127.65234	0.39747	0.0002245	-3.8887	-0.0021964	-3.4912	-0.0019719	564.8312433628546	66.224	0.40994	66.354	66.215	66.625	0.12996					30	19	2	0	0	0	0.20789	1	5855	5855		14.137	0.68308	1	128010			60502	5927	40398	40414	68546	68546					0.09361846097317539
VDRPLRSA	8	Unmodified	_VDRPLRSA_					0	0	0			REV__ENST00000361545.9_1_7:73703847-73704045:+|nuORF	REV__ENST00000361545.9_1_7:73703847-73704045:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2637634277344	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.87064	1	7838	7838		29.15	0	1	1458600	+		60503	25503	40399	40415	68547	68547					0.054357228488470355
VDRPLRSA	8	Unmodified	_VDRPLRSA_					0	0	0			REV__ENST00000361545.9_1_7:73703847-73704045:+|nuORF	REV__ENST00000361545.9_1_7:73703847-73704045:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.263671875	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.87792	1	7686	7686		31.53	7.3271	1	1329900	+		60504	25503	40399	40415	68548	68548					0.054357228488470355
VDRPLRSA	8	Unmodified	_VDRPLRSA_					0	0	0			REV__ENST00000361545.9_1_7:73703847-73704045:+|nuORF	REV__ENST00000361545.9_1_7:73703847-73704045:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2638244628906	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.87064	1	8067	8067		29.15	0	1	4597500	+		60505	25503	40399	40415	68549	68549					0.054357228488470355
VDRPQRFETA	10	Unmodified	_VDRPQRFETA_					0	0	0		ENST00000584265.1_1_17:60749371-60749413:+|nuORF	ENST00000584265.1_1_17:60749371-60749413:+|nuORF	ENST00000584265.1_1_17:60749371-60749413:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.8789367675781	3	406.879038	1217.61528	1.6649	0.00067741	-1.2662	-0.00051519	0.3987	0.00016222	406.87846849147417	19.102	1.2195	18.632	18.365	19.584	-0.46967					72	26	5	0	0	0	0.76747	1	463	463		41.08	6.9936	1	844720			60506	14131	40400	40416	68550	68550					0.015181297608933164
VDRQPRVA	8	Unmodified	_VDRQPRVA_					0	0	0		ENSG00000161652|ENST00000293405|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.76873779296875	2	470.769783	939.525013	-0.61958	-0.00029168	-0.8581	-0.00040397	-1.4777	-0.00069565	470.76921161929545	80.792	0.73714	81.319	80.992	81.729	0.52677					43	17	3	0	0	0	0.9283	1	9325	9325		49.442	0	1	1161600			60507	5648	40401	40417	68551	68551					0.052831252231385406
VDRQPRVAL	9	Unmodified	_VDRQPRVAL_					0	0	0		ENSG00000161652|ENST00000293405|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2	ENSG00000161652|ENST00000293405|IZUMO2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3251953125	2	527.311815	1052.60908	0.6568	0.00034634	-1.2506	-0.00065945	-0.59378	-0.00031311	527.3113178153096	81.798	1.2908	81.944	80.997	82.288	0.1455					55	29	2	0	0	0	0.20789	1	7808	7808		16.473	0	1	176680			60508	5648	40402	40418	68552	68552					0.08487656320039605
VDRQQAKL	8	Unmodified	_VDRQQAKL_					0	0	0			REV__ENSG00000148798|ENST00000369849|INA	REV__ENSG00000148798|ENST00000369849|INA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27764892578125	2	479.277441	956.540328	0.83201	0.00039876	-0.96322	-0.00046165	-0.13121	-6.2886E-05	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.86677	1	8867	8867		27.882	0	1	7289200	+		60509	20137	40403	40419	68553	68553					0.06031992020314192
VDRQQAKL	8	Unmodified	_VDRQQAKL_					0	0	0			REV__ENSG00000148798|ENST00000369849|INA	REV__ENSG00000148798|ENST00000369849|INA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2777099609375	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.90523	1	8754	8754		40.778	2.9666	1	7040000	+		60510	20137	40403	40419	68554	68554					0.06031992020314192
VDRRWYFYRHR	11	Unmodified	_VDRRWYFYRHR_					0	0	0		ENST00000450775.2_1_16:725790-727700:+|nuORF;ENSG00000103269|ENST00000352681|RHBDL1;nc|ENSG00000103269|O75783|RHBDL1	ENST00000450775.2_1_16:725790-727700:+|nuORF	ENST00000450775.2_1_16:725790-727700:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2374267578125	4	414.218192	1652.84366	-1.8355	-0.0007603	4.2742	0.0017704	2.4387	0.0010102	414.2195760628415	75.406	0.19711	75.531	75.444	75.641	0.12545					6	4	2	0	0	0	0.18343	1	7016	7016		5.4129	5.0724	1	19009			60511	2071	40404	40420	68555	68555					0.0433534712844903
VDRVVFPTI	9	Unmodified	_VDRVVFPTI_					0	0	0		ENSG00000109066|ENST00000335464|TMEM104	ENSG00000109066|ENST00000335464|TMEM104	ENSG00000109066|ENST00000335464|TMEM104	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.30322265625	2	523.305667	1044.59678	-1.4863	-0.0007778	-2.6443	-0.0013838	-4.1306	-0.0021616	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.76419	1	8548	8548		35.152	1.2304	1	3566700			60512	2446	40405	40421	68556	68556					0.0762661985700106
VDSLGLLIF	9	Unmodified	_VDSLGLLIF_					0	0	0			REV__ENSG00000279395|ENST00000625203|OR5L1	REV__ENSG00000279395|ENST00000625203|OR5L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.78973388671875	2	488.789318	975.564084	2.6694	0.0013048	-2.8817	-0.0014085	-0.21227	-0.00010375	488.7877664062211	102.11	0.80855	102.41	102.13	102.94	0.29864					53	18	4	0	0	0	0.39977	1	12423	12423		57.811	7.7867	1	2328000	+		60513	23535	40406	40422	68557	68557					0.07532412734155969
VDSLSPVAL	9	Unmodified	_VDSLSPVAL_					0	0	0		ENST00000467542.5_1_13:20411687-20425669:-|nuORF;nc|ENSG00000132950|Q9UJ78-1|ZMYM5;nc|ENSG00000132950|Q9UJ78-5|ZMYM5;ENST00000382909.5_1_13:20398619-20425669:-|nuORF;ENSG00000132950|ENST00000337963|ZMYM5	ENST00000467542.5_1_13:20411687-20425669:-|nuORF	ENST00000467542.5_1_13:20411687-20425669:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7537841796875	2	450.755475	899.496398	0.58167	0.00026219	-3.5127	-0.0015834	-2.9311	-0.0013212	450.7538387668244	81.269	4.0271	81.412	80.27	84.297	0.14352					214	98	3	0	0	0	0.72402	1	7686	7686		38.806	0	1	285810			60514	3844	40407	40423	68558	68558					0.0426296280331826
VDSPLPHY	8	Unmodified	_VDSPLPHY_					0	0	0		ENSG00000136541|ENST00000410096|ERMN;nc|ENSG00000136541|Q8TAM6-2|ERMN	ENSG00000136541|ENST00000410096|ERMN	ENSG00000136541|ENST00000410096|ERMN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.790771484375	2	464.232168	926.449782	-1.2001	-0.00055714	1.7867	0.00082943	0.58654	0.00027229	464.2330598729843	35.18	0.45339	35.186	34.975	35.428	0.0063934					15	10	2	0	0	0	0.4196	1	2181	2181		44.531	12.576	1	38046			60515	4118	40408	40424	68559	68559					-0.016384770279501026
VDSRVLRGS	9	Unmodified	_VDSRVLRGS_					0	0	0			REV__ENSG00000102910|ENST00000285737|LONP2	REV__ENSG00000102910|ENST00000285737|LONP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.78009033203125	2	494.780348	987.546142	-0.075058	-3.7137E-05	-0.1812	-8.9652E-05	-0.25625	-0.00012679	494.7801083626478	84.098	2.6315	84.165	82.573	85.204	0.067001					119	60	3	0	0	0	0.69624	1	8357	8357		40.778	6.6056	1	230560	+		60516	17372	40409	40425	68560	68560					0.05187090532012917
VDTMGCLV	8	Unmodified	_VDTMGCLV_					0	0	0		ENST00000449870.5_2_19:10802311-10802632:+|nuORF	ENST00000449870.5_2_19:10802311-10802632:+|nuORF	ENST00000449870.5_2_19:10802311-10802632:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.1839294433594	2	419.195882	836.377211	0.1038	4.3511E-05	1.3043	0.00054675	1.4081	0.00059026	419.1962637093086	31.144	0.51288	31.162	30.959	31.472	0.01836					27	11	3	0	0	0	0.4196	1	1670	1670		35.201	8.4046	1	58082			60517	11882	40410	40426	68561	68561					-0.047522704173729835
VDVATPSVHE	10	Unmodified	_VDVATPSVHE_					0	0	0		ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3617553710938	2	527.264196	1052.51384	1.0219	0.00053881	-2.219	-0.00117	-1.1971	-0.00063117	527.2635387866524	32.668	0.42235	32.88	32.68	33.102	0.21168					17	9	3	0	0	0	0.37624	1	2311	2311		31.53	3.4483	1	97124			60518	3560	40411	40427	68562	68562					-0.01031741661677188
VDVFKRLGL	9	Unmodified	_VDVFKRLGL_					0	0	0			REV__ENSG00000121101|ENST00000349033|TEX14	REV__ENSG00000121101|ENST00000349033|TEX14	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.82177734375	2	523.821484	1045.62842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.59	1	101.85	101.35	102.35	0.26322								0	0	0	0.30613	1	12314	12314		42.396	8.8806	1		+		60519	18446	40412	40428	68563	68563					0.1074261261094307
VDVNECET	8	Unmodified	_VDVNECET_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2;ENSG00000090006|ENST00000396819|LTBP4;nc|ENSG00000090006|Q8N2S1-3|LTBP4;nc|ENSG00000090006|Q8N2S1|LTBP4	nc|ENSG00000163520|P98095|FBLN2;nc|ENSG00000090006|Q8N2S1-3|LTBP4	nc|ENSG00000163520|P98095|FBLN2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.5650939941406	2	454.686933	907.359312	0.52733	0.00023977	-2.3251	-0.0010572	-1.7978	-0.00081743	454.6865098331865	30.522	0.34097	30.509	30.242	30.583	-0.013159					9	8	2	0	0	0	0.4196	1	1581	1581		12.959	0	1	4787.2			60520	5814;14798	40413	40429	68564	68564					-0.09807314138538459
VDVNIGEYI	9	Unmodified	_VDVNIGEYI_					0	0	0			REV__ENSG00000278053|ENST00000617633|DDX52	REV__ENSG00000278053|ENST00000617633|DDX52	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2929382324219	2	511.263665	1020.51278	0.63471	0.0003245	0.39794	0.00020345	1.0327	0.00052796	511.2629539615875	54.189	1.3418	54.595	53.986	55.328	0.40663					65	31	4	0	0	0	0.20789	1	5456	5456		35.152	0	1	428000	+		60521	24030	40414	40430	68565	68565					0.003340439694284214
VDVNNMLQLY	10	Oxidation (M)	_VDVNNM(Oxidation (M))LQLY_		VDVNNM(1)LQLY		VDVNNM(51)LQLY	0	0	1		nc|ENSG00000213047|Q6P3S1-3|DENND1B;nc|ENSG00000213047|Q6P3S1-4|DENND1B;nc|ENSG00000213047|Q6P3S1-2|DENND1B;nc|ENSG00000213047|Q6P3S1-5|DENND1B;ENSG00000213047|ENST00000620048|DENND1B	nc|ENSG00000213047|Q6P3S1-3|DENND1B	nc|ENSG00000213047|Q6P3S1-3|DENND1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.800048828125	2	612.800088	1223.58562	-0.26076	-0.0001598	-2.6275	-0.0016101	-2.8883	-0.0017699	612.7983695527461	60.162	0.93864	60.163	59.86	60.798	0.00051498					65	32	3	0	0	0	0.57924	1	5216	5216		51.193	6.8155	1	772020			60522	8576	40415	40431	68566	68566		151			-0.017225702994437597
VDVSLEPN	8	Unmodified	_VDVSLEPN_					0	0	0			REV__ENSG00000139540|ENST00000454355|SLC39A5	REV__ENSG00000139540|ENST00000454355|SLC39A5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7215270996094	2	436.721633	871.428712	-1.2028	-0.0005253	1.2779	0.0005581	0.075106	3.28E-05	436.7221921506053	86.568	0.77919	86.568	86.256	87.035	0					34	17	3	0	0	0	0.73851	1	8266	8266		65.803	2.4969	1	198220	+		60523	19548	40416	40432	68567	68567					-0.01214487127481334
VDVTKILVYT	10	Unmodified	_VDVTKILVYT_					0	0	0			REV__nc|ENSG00000146839|Q9Y493-6|ZAN	REV__nc|ENSG00000146839|Q9Y493-6|ZAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8429565429688	2	575.839539	1149.66453	1.9392	0.0011166	3.8234	0.0022017	5.7626	0.0033183	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.80179	1	9943	9943		39.253	3.6345	1	5986700	+		60524	20035	40417	40433	68568	68568					0.09568024997133762
VEADKELV	8	Unmodified	_VEADKELV_					0	0	0			REV__nc|ENSG00000121749|Q8TC07|TBC1D15	REV__nc|ENSG00000121749|Q8TC07|TBC1D15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.74554443359375	2	451.745108	901.475663	-0.092061	-4.1588E-05	1.7939	0.00081036	1.7018	0.00076878	451.7457658869967	34.705	0.79864	34.701	34.334	35.132	-0.0047417					49	20	3	0	0	0	0.9295	1	2116	2116		55.504	2.1528	1	211490	+		60525	29816	40418	40434	68569	68569					0.020983724236771195
VEAEGIRPGP	10	Unmodified	_VEAEGIRPGP_					0	0	0		ENST00000361545.9_1_7:73818191-73818509:+|nuORF	ENST00000361545.9_1_7:73818191-73818509:+|nuORF	ENST00000361545.9_1_7:73818191-73818509:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.7738037109375	2	512.774731	1023.53491	-0.050404	-2.5846E-05	-0.62987	-0.00032298	-0.68027	-0.00034882	512.7743229859149	45.174	0.62418	45.105	44.768	45.392	-0.06863					30	14	3	0	0	0	0.71042	1	3243	3243		44.117	8.4985	1	318280			60526	10482	40419	40435	68570	68570					0.02408268437852712
VEAHTNFGF	9	Unmodified	_VEAHTNFGF_					0	0	0		ENSG00000168447|ENST00000343070|SCNN1B;nc|ENSG00000168447|P51168-2|SCNN1B	ENSG00000168447|ENST00000343070|SCNN1B	ENSG00000168447|ENST00000343070|SCNN1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.2386779785156	2	511.240524	1020.46649	-0.41668	-0.00021302	-3.0037	-0.0015356	-3.4204	-0.0017486	511.2388007435022	51.114	1.0082	51.122	50.757	51.765	0.0077477					45	29	2	0	0	0	0.7932	1	4422	4422		23.042	0.46283	1	118550			60527	6401	40420	40436	68571	68571					-0.04291976142008025
VEAKFVQDTL	10	Unmodified	_VEAKFVQDTL_					0	0	0		ENSG00000054116|ENST00000373166|TRAPPC3;nc|ENSG00000054116|O43617-2|TRAPPC3;ENST00000462715.1_1_1:36602806-36603094:-|nuORF	ENSG00000054116|ENST00000373166|TRAPPC3	ENSG00000054116|ENST00000373166|TRAPPC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.3113403320312	2	575.311146	1148.60774	-0.17194	-9.8921E-05	0.90228	0.00051909	0.73034	0.00042017	575.3113753066632	53.919	0.58708	54.333	54.077	54.665	0.4139					31	13	3	0	0	0	0.021045	2	5478	5467;5478		120.27	33.66	1	799690			60528	1014	40421	40437	68572;68573	68573					0.039379774406370416
VEAKFVQDTL	10	Unmodified	_VEAKFVQDTL_					0	0	0		ENSG00000054116|ENST00000373166|TRAPPC3;nc|ENSG00000054116|O43617-2|TRAPPC3;ENST00000462715.1_1_1:36602806-36603094:-|nuORF	ENSG00000054116|ENST00000373166|TRAPPC3	ENSG00000054116|ENST00000373166|TRAPPC3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	575.311146	1148.60774	-0.59849	-0.00034432	0.93559	0.00053826	0.3371	0.00019394	575.3114023534854	53.758	0.66905	54.343	54.039	54.708	0.58474	0.0050239	1.5567E-05	NaN	120.27	38	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1075400			60529	1014	40421	40437							0.039379774406370416
VEAREPAVGP	10	Unmodified	_VEAREPAVGP_					0	0	0			REV__ENSG00000179922|ENST00000325351|ZNF784	REV__ENSG00000179922|ENST00000325351|ZNF784	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.774169921875	2	512.774731	1023.53491	-1.4965	-0.00076736	0.77005	0.00039486	-0.72642	-0.00037249	512.7750166374884	45.034	0.8504	45.034	44.739	45.589	0					37	20	3	0	0	0	0.54701	1	3327	3327		52.937	6.9645	1	378360	+		60530	22367	40422	40438	68574	68574					0.02408268437852712
VEAREPAVGP	10	Unmodified	_VEAREPAVGP_					0	0	0			REV__ENSG00000179922|ENST00000325351|ZNF784	REV__ENSG00000179922|ENST00000325351|ZNF784	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	512.7744140625	2	512.774731	1023.53491	0.25231	0.00012938	-0.8261	-0.0004236	-0.57379	-0.00029423	512.774198051591	45.3	0.73182	45.281	44.968	45.7	-0.018585					35	16	3	0	0	0	0.51302	1	3570	3570		54.776	0	1	555070	+		60531	22367	40422	40438	68575	68575					0.02408268437852712
VEARPAALA	9	Unmodified	_VEARPAALA_					0	0	0		ENST00000413312.5_1_2:214149168-214161993:+|nuORF	ENST00000413312.5_1_2:214149168-214161993:+|nuORF	ENST00000413312.5_1_2:214149168-214161993:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.2608337402344	2	449.261259	896.507966	-1.6904	-0.00075944	0.29835	0.00013403	-1.3921	-0.0006254	449.2612435598619	72.23	1.3235	72.615	72.251	73.575	0.38582					73	31	3	0	0	0	0.77546	1	8042	8042		31.955	5.1588	1	1206100			60532	11348	40423	40439	68576	68576					0.05557204617309708
VEARQKHA	8	Unmodified	_VEARQKHA_					0	0	0		ENSG00000165392|ENST00000298139|WRN	ENSG00000165392|ENST00000298139|WRN	ENSG00000165392|ENST00000298139|WRN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	469.7616271972656	2	469.761958	937.509363	0.13992	6.5729E-05	-1.2577	-0.0005908	-1.1177	-0.00052507	469.7613068625106	35.735	1.6772	35.674	35.283	36.96	-0.060337					67	47	2	0	0	0	0.86288	1	1897	1897		26.796	1.222	1	144740			60533	6079	40424	40440	68577	68577					0.03810838706078812
VEATVILAI	9	Unmodified	_VEATVILAI_					0	0	0		ENST00000441603.1_1_11:5592613-5592883:-|nuORF	ENST00000441603.1_1_11:5592613-5592883:-|nuORF	ENST00000441603.1_1_11:5592613-5592883:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.79058837890625	2	464.789318	927.564084	-1.1101	-0.00051598	3.984	0.0018517	2.8738	0.0013357	464.791027939711	34.441	1.872	34.443	33.918	35.79	0.0026054					109	43	3	0	0	0	0.7932	1	2078	2078		18.324	1.6194	1	415400			60534	11788	40425	40441	68578	68578					0.09740412734117854
VEATVKLDEL	10	Unmodified	_VEATVKLDEL_					0	0	0		ENSG00000131370|ENST00000383791|SH3BP5;ENST00000426925.5_1_3:15314864-15374612:-|nuORF	ENSG00000131370|ENST00000383791|SH3BP5	ENSG00000131370|ENST00000383791|SH3BP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.810791015625	2	558.810979	1115.6074	-0.65628	-0.00036673	0.45165	0.00025239	-0.20463	-0.00011435	558.811215692923	57.81	0.78736	58.204	57.738	58.526	0.39408					29	19	2	0	0	0	0.025248	1	6039	6039		117.81	27.441	1	685880			60535	3723	40426	40442	68579	68579					0.05422557720748955
VEATVKLDEL	10	Unmodified	_VEATVKLDEL_					0	0	0		ENSG00000131370|ENST00000383791|SH3BP5;ENST00000426925.5_1_3:15314864-15374612:-|nuORF	ENSG00000131370|ENST00000383791|SH3BP5	ENSG00000131370|ENST00000383791|SH3BP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.811279296875	2	558.810979	1115.6074	0.4052	0.00022643	-0.79629	-0.00044497	-0.39108	-0.00021854	558.8103912713815	57.693	0.6338	58.248	57.965	58.599	0.55512					28	15	2	0	0	0	0.14207	1	6034	6034		96.034	27.247	1	865790			60536	3723	40426	40442	68580	68580					0.05422557720748955
VEAVACFAY	9	Carbamidomethyl (C)	_VEAVAC(Carbamidomethyl (C))FAY_	VEAVAC(1)FAY		VEAVAC(58)FAY		0	1	0		ENST00000470209.5_1_X:153173185-153178999:-|nuORF;ENST00000404127.6_1_X:153173185-153186849:-|nuORF;ENSG00000089820|ENST00000350060|ARHGAP4;nc|ENSG00000089820|P98171-2|ARHGAP4	ENST00000470209.5_1_X:153173185-153178999:-|nuORF	ENST00000470209.5_1_X:153173185-153178999:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	515.2432250976562	2	515.239135	1028.46372	-0.1252	-6.4509E-05	2.6487	0.0013647	2.5235	0.0013002	515.2403804188378	47.505	0.54878	47.417	47.135	47.684	-0.087646					40	18	4	0	0	0	0.39977	1	3536	3536		57.811	9.8957	1	667210			60537	1633	40427	40443	68581	68581	21				-0.04937567591196057
VEAVEQNTL	9	Unmodified	_VEAVEQNTL_					0	0	0		ENST00000319041.6_1_1:26607416-26607611:+|nuORF;ENSG00000142669|ENST00000270792|SH3BGRL3	ENST00000319041.6_1_1:26607416-26607611:+|nuORF	ENST00000319041.6_1_1:26607416-26607611:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.75836181640625	2	501.758746	1001.50294	-1.2466	-0.00062551	1.338	0.00067135	0.091372	4.5847E-05	501.75927053123917	46.674	0.70754	47.146	46.856	47.563	0.4714					27	16	2	0	0	0	0.030919	2	4400	4400;4411		117.81	45.934	1	2297000			60538	10015	40428	40444	68582;68583	68582					0.0022485596406340846
VEAVEQNTL	9	Unmodified	_VEAVEQNTL_					0	0	0		ENST00000319041.6_1_1:26607416-26607611:+|nuORF;ENSG00000142669|ENST00000270792|SH3BGRL3	ENST00000319041.6_1_1:26607416-26607611:+|nuORF	ENST00000319041.6_1_1:26607416-26607611:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.7590026855469	2	501.758746	1001.50294	-0.57284	-0.00028743	0.68338	0.00034289	0.11053	5.5461E-05	501.7589476140449	46.478	0.58158	47.401	47.069	47.651	0.92315					26	13	3	0	0	0	0.014602	2	4393	4393;4415		129.42	36.278	1	2172900			60539	10015	40428	40444	68584;68585	68584					0.0022485596406340846
VEDDARGTVVL	11	Unmodified	_VEDDARGTVVL_					0	0	0		ENSG00000139626|ENST00000267082|ITGB7;nc|ENSG00000139626|P26010-2|ITGB7	ENSG00000139626|ENST00000267082|ITGB7	ENSG00000139626|ENST00000267082|ITGB7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.3086547851562	2	587.309135	1172.60372	-1.5147	-0.00088961	1.5036	0.00088305	-0.011166	-6.558E-06	587.309954318002	47.157	0.74612	47.628	47.3	48.047	0.47139					44	17	4	0	0	0	0.00011209	2	4482	4469;4482		136.99	29.982	1	4655600			60540	4384	40429	40445	68586;68587	68587					0.02431887946909228
VEDDARGTVVL	11	Unmodified	_VEDDARGTVVL_					0	0	0		ENSG00000139626|ENST00000267082|ITGB7;nc|ENSG00000139626|P26010-2|ITGB7	ENSG00000139626|ENST00000267082|ITGB7	ENSG00000139626|ENST00000267082|ITGB7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.3096923828125	2	587.309135	1172.60372	-1.045	-0.00061371	1.1383	0.00066853	0.093339	5.4819E-05	587.3097736269917	46.939	0.85826	47.862	47.607	48.466	0.92315					46	20	4	0	0	0	0.06303	1	4449	4449		99.788	12.091	1	4776800			60541	4384	40429	40445	68588	68588					0.02431887946909228
VEDDEVLVMD	10	Unmodified	_VEDDEVLVMD_					0	0	0			REV__ENSG00000134183.12,GNAT2,chr1,-,I7.1,109604105,109605969|10|5.64|2|intron	REV__ENSG00000134183.12,GNAT2,chr1,-,I7.1,109604105,109605969|10|5.64|2|intron	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.35400390625	2	582.260462	1162.50637	0.72268	0.00042079	4.3714	0.0025453	5.0941	0.0029661	582.7636168836391	103.1	0.23236	103.28	103.16	103.39	0.18298					9	5	3	0	0	0	0.37624	1	10884	10884		27.882	0	1	109660	+		60542	18041	40430	40446	68589	68589					-0.0683826204426623
VEDEDNNCNDD	11	Unmodified	_VEDEDNNCNDD_					0	0	0			REV__ENSG00000136541|ENST00000410096|ERMN	REV__ENSG00000136541|ENST00000410096|ERMN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.2133178710938	2	641.212228	1280.4099	-0.69196	-0.00044369	-2.1332	-0.0013678	-2.8251	-0.0018115	641.2109050171896	35.11	0.70782	35.053	34.632	35.339	-0.056385					27	16	2	0	0	0	0.76699	1	2244	2244		18.262	7.9968	1	61129	+		60543	19319	40431	40447	68590	68590					-0.21908481342165942
VEDETGHIVL	10	Unmodified	_VEDETGHIVL_					0	0	0			REV__nc|ENSG00000136379|Q6PCB6-2|ABHD17C	REV__nc|ENSG00000136379|Q6PCB6-2|ABHD17C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.28466796875	2	556.285128	1110.5557	-0.61373	-0.00034141	0.64192	0.00035709	0.028186	1.5679E-05	556.2851180627894	45.758	0.96884	46.23	45.928	46.897	0.47139					58	23	4	0	0	0	0.16515	1	4273	4273		93.195	2.8256	1	5232600	+		60544	19306	40432	40448	68591	68591					0.004848140268450152
VEDGVFDIHL	10	Unmodified	_VEDGVFDIHL_					0	0	0		ENST00000464324.5_1_11:64494776-64507712:-|nuORF;ENSG00000068831|ENST00000394432|RASGRP2;nc|ENSG00000068831|Q7LDG7-4|RASGRP2;ENST00000421556.5_1_11:64494776-64511570:-|nuORF;nc|ENSG00000068831|Q7LDG7-2|RASGRP2;ENST00000488071.1_1_11:64494776-64502720:-|nuORF	ENST00000464324.5_1_11:64494776-64507712:-|nuORF	ENST00000464324.5_1_11:64494776-64507712:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.2869873046875	2	572.287671	1142.56079	-0.22371	-0.00012802	0.29549	0.0001691	0.071781	4.108E-05	572.2877687632908	78.693	0.76279	79.103	78.634	79.396	0.4106					36	17	3	0	0	0	0.097274	1	8981	8981		101.6	32.814	1	637060			60545	1209	40433	40449	68592	68592					-0.004788821105421448
VEDGVFDIHL	10	Unmodified	_VEDGVFDIHL_					0	0	0		ENST00000464324.5_1_11:64494776-64507712:-|nuORF;ENSG00000068831|ENST00000394432|RASGRP2;nc|ENSG00000068831|Q7LDG7-4|RASGRP2;ENST00000421556.5_1_11:64494776-64511570:-|nuORF;nc|ENSG00000068831|Q7LDG7-2|RASGRP2;ENST00000488071.1_1_11:64494776-64502720:-|nuORF	ENST00000464324.5_1_11:64494776-64507712:-|nuORF	ENST00000464324.5_1_11:64494776-64507712:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.2877197265625	2	572.287671	1142.56079	0.1768	0.00010118	0.19012	0.0001088	0.36692	0.00020998	572.2876570568126	78.523	0.6749	79.087	78.784	79.459	0.56332					39	15	3	0	0	0	0.019425	1	9001	9001		122.18	61.204	1	626920			60546	1209	40433	40449	68593	68593					-0.004788821105421448
VEDIHGLFSL	10	Unmodified	_VEDIHGLFSL_					0	0	0		ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.2979125976562	2	565.298039	1128.58152	0.25988	0.00014691	-0.44715	-0.00025277	-0.18727	-0.00010587	565.2977684577791	78.75	1.615	79.161	78.717	80.332	0.41059					74	37	4	0	0	0	0.0418	3	8997	8997;9010;9021		110.12	43.701	1	1589300			60547	2352	40434	40450	68594;68595;68596	68594					0.02237708269126415
VEDIHGLFSL	10	Unmodified	_VEDIHGLFSL_					0	0	0		ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.2985229492188	2	565.298039	1128.58152	0.53709	0.00030361	-0.45952	-0.00025977	0.077567	4.3849E-05	565.2977527595046	78.614	1.5702	79.178	78.868	80.438	0.56332					64	36	3	0	0	0	0.023513	2	9012	9012;9025		118.74	53.278	1	1754800			60548	2352	40434	40450	68597;68598	68597					0.02237708269126415
VEDITPPRL	9	Unmodified	_VEDITPPRL_					0	0	0		nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.2907104492188	2	520.292756	1038.57096	0.94446	0.0004914	-1.3053	-0.00067911	-0.36079	-0.00018772	520.2918368496008	54.194	0.91959	54.6	54.07	54.99	0.40663					46	21	3	0	0	0	0.36616	1	5510	5510		60.118	8.9256	1	684010			60549	3664	40435	40451	68599	68599					0.053217256147036096
VEDITPPRL	9	Unmodified	_VEDITPPRL_					0	0	0		nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	520.289794921875	2	520.292756	1038.57096	-0.32923	-0.0001713	0.1974	0.00010271	-0.13183	-6.8589E-05	520.2926887872011	53.999	0.79483	54.584	54.164	54.959	0.58474					49	18	3	0	0	0	0.36616	1	5494	5494		60.118	17.254	1	760580			60550	3664	40435	40451	68600	68600					0.053217256147036096
VEDKFILH	8	Unmodified	_VEDKFILH_					0	0	0		ENST00000467008.5_1_6:16739520-16739679:-|nuORF	ENST00000467008.5_1_6:16739520-16739679:-|nuORF	ENST00000467008.5_1_6:16739520-16739679:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.7742004394531	2	500.776742	999.538931	-0.57961	-0.00029025	-3.4885	-0.001747	-4.0681	-0.0020372	500.77496345049894	50.6	0.57563	50.629	50.343	50.919	0.029629					31	17	2	0	0	0	0.87479	1	4003	4003		30.504	0.18592	1	273720			60551	12142	40436	40452	68601	68601					0.03914357931569157
VEDLELNIK	9	Unmodified	_VEDLELNIK_					0	0	0		nc|ENSG00000179593|O15296-3|ALOX15B;ENSG00000179593|ENST00000380183|ALOX15B;ENST00000571240.1_1_17:7942473-7945810:+|nuORF;nc|ENSG00000179593|O15296-2|ALOX15B;nc|ENSG00000179593|O15296-4|ALOX15B	nc|ENSG00000179593|O15296-3|ALOX15B	nc|ENSG00000179593|O15296-3|ALOX15B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7706298828125	2	536.797872	1071.58119	-0.53855	-0.00028909	-1.9493	-0.0010464	-2.4879	-0.0013355	536.797293615269	70.723	0.6084	71.27	71.09	71.698	0.54756					21	14	2	0	0	0	0.20789	1	7859	7859		60.118	0	1	100300			60552	7280	40437	40453	68602	68602					0.0482628854927043
VEDPTFLNQL	10	Unmodified	_VEDPTFLNQL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	588.3013916015625	2	588.300778	1174.587	0.11621	6.8364E-05	0.24235	0.00014257	0.35855	0.00021094	588.3006946004641	82.484	0.7851	82.958	82.631	83.416	0.47383					41	18	3	0	0	0	0.025248	1	9583	9583		117.81	40.493	1	665140			60553	8133	40438	40454	68603	68603					0.006693870609524311
VEDPTFLNQL	10	Unmodified	_VEDPTFLNQL_					0	0	0		ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	ENSG00000197102|ENST00000360184|DYNC1H1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	588.300778	1174.587	-0.93559	-0.00055041	1.0101	0.00059427	0.074552	4.3859E-05	588.3011808903788	82.526	0.70206	82.957	82.672	83.374	0.43108	-0.00053189	0.0002484	NaN	117.81	40	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	726830			60554	8133	40438	40454							0.006693870609524311
VEDQLARGL	9	Unmodified	_VEDQLARGL_					0	0	0		ENST00000466080.1_1_5:133324828-133328703:-|nuORF;ENSG00000213585|ENST00000265333|VDAC1	ENST00000466080.1_1_5:133324828-133328703:-|nuORF	ENST00000466080.1_1_5:133324828-133328703:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.7746887207031	2	500.774731	999.534909	0.35117	0.00017586	-0.43768	-0.00021918	-0.086516	-4.3325E-05	500.77440458512547	50.648	0.53051	50.698	50.372	50.903	0.049896					40	17	3	0	0	0	0.71772	1	4006	4006		39.253	2.0937	1	218880			60555	8595	40439	40455	68604	68604					0.03512268437839339
VEDVSVDTSY	10	Unmodified	_VEDVSVDTSY_					0	0	0			REV__nc|ENSG00000148672|P00367-3|GLUD1	REV__nc|ENSG00000148672|P00367-3|GLUD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	557.7922973632812	2	557.250951	1112.48735	0.20276	0.00011299	4.4224	0.0024644	4.6251	0.0025774	557.2530483809286	37.888	0.37125	38.201	38.018	38.389	0.31312					21	9	3	0	0	0	0.37624	1	3059	3059		27.882	6.9353	1	192840	+		60556	20129	40440	40456	68605	68605					-0.06439475343631784
VEEATHAQI	9	Unmodified	_VEEATHAQI_					0	0	0			REV__nc|ENSG00000196371|P22083-2|FUT4	REV__nc|ENSG00000196371|P22083-2|FUT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.250732421875	2	499.251089	996.487624	-0.12384	-6.1825E-05	-0.2059	-0.0001028	-0.32973	-0.00016462	499.25083033219846	54.708	0.54705	55.115	54.781	55.328	0.40663					30	12	4	0	0	0	0.38563	1	5587	5587		58.782	6.4828	1	654490	+		60557	23120	40441	40457	68606	68606					-0.01076010833151031
VEEAVATRTAL	11	Unmodified	_VEEAVATRTAL_					0	0	0		nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1;ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1	nc|ENSG00000100813|Q9UKV3-5|ACIN1	nc|ENSG00000100813|Q9UKV3-5|ACIN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.3187866210938	2	580.319502	1158.62445	-2.6641	-0.001546	1.0666	0.00061895	-1.5975	-0.00092708	580.3199853488395	42.381	0.52462	42.815	42.646	43.17	0.4334					28	12	3	0	0	0	0.11377	1	3777	3777		90.149	43.692	1	910040			60558	14818	40442	40458	68607	68607					0.05148478326600525
VEEAVATRTAL	11	Unmodified	_VEEAVATRTAL_					0	0	0		nc|ENSG00000100813|Q9UKV3-5|ACIN1;nc|ENSG00000100813|Q9UKV3|ACIN1;ENSG00000100813|ENST00000605057|ACIN1;nc|ENSG00000100813|Q9UKV3-3|ACIN1;nc|ENSG00000100813|Q9UKV3-2|ACIN1	nc|ENSG00000100813|Q9UKV3-5|ACIN1	nc|ENSG00000100813|Q9UKV3-5|ACIN1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	580.319502	1158.62445	-2.4199	-0.0014043	1.269	0.00073644	-1.1509	-0.0006679	580.3201475191531	42.237	0.44254	42.935	42.731	43.174	0.69754	0.060183	6.8675E-05	NaN	90.149	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	764190			60559	14818	40442	40458							0.05148478326600525
VEEGELLRVMP	11	Unmodified	_VEEGELLRVMP_					0	0	0			REV__nc|ENSG00000125731|Q9BRG2-2|SH2D3A	REV__nc|ENSG00000125731|Q9BRG2-2|SH2D3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.56060791015625	3	424.560317	1270.65912	1.4537	0.00061718	-0.47612	-0.00020214	0.97756	0.00041503	424.5601606035987	27.607	1.8639	27.352	26.945	28.809	-0.25465					132	44	5	0	0	0	0.72892	1	1668	1668		26.75	2.5179	1	5946800	+		60560	18662	40443	40459	68608	68608					0.03461978143036504
VEEGKISTSL	10	Unmodified	_VEEGKISTSL_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.7868041992188	2	531.787504	1061.56045	-0.86406	-0.0004595	0.24182	0.00012859	-0.62225	-0.0003309	531.7874528636692	42.882	0.74136	43.315	43.047	43.788	0.4334					42	17	4	0	0	0	0.025779	1	3859	3859		117.53	29.349	1	3354300			60561	1492	40444	40460	68609	68609					0.03213698169611234
VEEGKISTSL	10	Unmodified	_VEEGKISTSL_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7865600585938	2	531.787504	1061.56045	-1.8857	-0.0010028	1.0358	0.00055083	-0.84989	-0.00045196	531.7879209476595	42.69	0.7375	43.388	43.132	43.869	0.69754					41	17	4	0	0	0	0.021016	2	3817	3817;3841		120.31	21.724	1	3147700			60562	1492	40444	40460	68610;68611	68610					0.03213698169611234
VEEPPQSV	8	Unmodified	_VEEPPQSV_					0	0	0			REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.7221374511719	2	442.721633	883.428712	0.37013	0.00016386	1.948	0.00086243	2.3181	0.0010263	442.7222188277578	27.775	1.2287	27.811	27.475	28.704	0.03607					60	39	2	0	0	0	0.90465	1	1277	1277		40.573	0	1	168890	+		60563	18513	40445	40461	68612	68612					-0.017664871274632787
VEERPAVSL	9	Unmodified	_VEERPAVSL_					0	0	0		ENSG00000167978|ENST00000301740|SRRM2;nc|ENSG00000167978|Q9UQ35-2|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.2754821777344	2	500.277106	998.53966	-1.1069	-0.00055374	-0.6294	-0.00031488	-1.7363	-0.00086861	500.27662991574067	44.11	0.53043	44.561	44.322	44.853	0.45024					20	12	2	0	0	0	0.17881	2	4024	4024;4035		78.264	12.798	1	989650			60564	6348	40446	40462	68613;68614	68613					0.04033152580609567
VEERPAVSL	9	Unmodified	_VEERPAVSL_					0	0	0		ENSG00000167978|ENST00000301740|SRRM2;nc|ENSG00000167978|Q9UQ35-2|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	ENSG00000167978|ENST00000301740|SRRM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.2747802734375	2	500.277106	998.53966	-1.3118	-0.00065626	-0.60836	-0.00030435	-1.9202	-0.00096061	500.2766168533365	43.901	0.57198	44.675	44.424	44.996	0.77379					20	13	2	0	0	0	0.16822	1	4023	4023		80.455	16.247	1	1062000			60565	6348	40446	40462	68615	68615					0.04033152580609567
VEESACQFF	9	Unmodified	_VEESACQFF_					0	0	0		ENSG00000095485|ENST00000354105|CWF19L1;ENST00000482452.5_1_10:102003500-102020776:-|nuORF;nc|ENSG00000095485|Q69YN2-3|CWF19L1	ENSG00000095485|ENST00000354105|CWF19L1	ENSG00000095485|ENST00000354105|CWF19L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2274780273438	2	530.226225	1058.4379	0.38077	0.00020189	3.2488	0.0017226	3.6296	0.0019245	530.2278276884957	29.363	0.92472	29.394	29.053	29.978	0.030947					58	28	3	0	0	0	0.74721	1	1435	1435		37.159	1.9584	1	251920			60566	1728	40447	40463	68616	68616					-0.0889846183345071
VEESGEHVIL	10	Unmodified	_VEESGEHVIL_					0	0	0		ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2;ENSG00000108883|ENST00000426333|EFTUD2;ENST00000590977.5_1_17:42931463-42936567:-|nuORF;ENST00000586276.5_1_17:42931463-42937758:-|nuORF	ENST00000590367.5_1_17:42931463-42950195:-|nuORF	ENST00000590367.5_1_17:42931463-42950195:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.2853393554688	2	556.285128	1110.5557	-0.61373	-0.00034141	0.64192	0.00035709	0.028186	1.5679E-05	556.2851180627894	45.758	0.96884	46.23	45.928	46.897	0.47139					58	23	4	0	0	0	0.076789	3	4261	4261;4286;4300		104.75	22.808	1	5232600			60567	2438	40448	40464	68617;68618;68619	68617					0.0048481402686775255
VEESGEHVIL	10	Unmodified	_VEESGEHVIL_					0	0	0		ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2;ENSG00000108883|ENST00000426333|EFTUD2;ENST00000590977.5_1_17:42931463-42936567:-|nuORF;ENST00000586276.5_1_17:42931463-42937758:-|nuORF	ENST00000590367.5_1_17:42931463-42950195:-|nuORF	ENST00000590367.5_1_17:42931463-42950195:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.2852783203125	2	556.285128	1110.5557	-0.68961	-0.00038362	0.45621	0.00025378	-0.2334	-0.00012984	556.2850160238362	45.599	0.83355	46.494	46.208	47.042	0.89542					50	20	4	0	0	0	0.055034	4	4280	4247;4255;4267;4280		108.09	31.313	1	4958900			60568	2438	40448	40464	68620;68621;68622;68623	68623					0.0048481402686775255
VEFDEVDSL	9	Unmodified	_VEFDEVDSL_					0	0	0		nc|ENSG00000106682|Q15056-2|EIF4H;ENSG00000106682|ENST00000265753|EIF4H;ENST00000479338.5_1_7:73588713-73604094:+|nuORF;ENST00000489484.5_1_7:73588713-73604262:+|nuORF	nc|ENSG00000106682|Q15056-2|EIF4H	nc|ENSG00000106682|Q15056-2|EIF4H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.7424926757812	2	526.742762	1051.47097	0.41852	0.00022045	-0.6252	-0.00032932	-0.20668	-0.00010887	526.7422541331694	75.209	1.0379	75.604	75.158	76.196	0.39507					57	24	3	0	0	0	0.17181	5	8512	8490;8500;8512;8524;8536		79.713	16.373	1	1206900			60569	2312	40449	40465	68624;68625;68626;68627;68628	68626					-0.052705565097539875
VEFDEVDSL	9	Unmodified	_VEFDEVDSL_					0	0	0		nc|ENSG00000106682|Q15056-2|EIF4H;ENSG00000106682|ENST00000265753|EIF4H;ENST00000479338.5_1_7:73588713-73604094:+|nuORF;ENST00000489484.5_1_7:73588713-73604262:+|nuORF	nc|ENSG00000106682|Q15056-2|EIF4H	nc|ENSG00000106682|Q15056-2|EIF4H	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7421875	2	526.742762	1051.47097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.02	1	75.584	75.084	76.084	0.56458								0	0	0	0.09709	1	8505	8505		76.774	20.053	1				60570	2312	40449	40465	68629	68629					-0.052705565097539875
VEFDEVDSL	9	Unmodified	_VEFDEVDSL_					0	0	0		nc|ENSG00000106682|Q15056-2|EIF4H;ENSG00000106682|ENST00000265753|EIF4H;ENST00000479338.5_1_7:73588713-73604094:+|nuORF;ENST00000489484.5_1_7:73588713-73604262:+|nuORF	nc|ENSG00000106682|Q15056-2|EIF4H	nc|ENSG00000106682|Q15056-2|EIF4H	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7429809570312	2	526.742762	1051.47097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.132	1	75.697	75.197	76.197	0.56458								0	0	0	0.01817	1	8521	8521		108.09	19.445	1				60571	2312	40449	40465	68630	68630					-0.052705565097539875
VEFDEVDSL	9	Unmodified	_VEFDEVDSL_					0	0	0		nc|ENSG00000106682|Q15056-2|EIF4H;ENSG00000106682|ENST00000265753|EIF4H;ENST00000479338.5_1_7:73588713-73604094:+|nuORF;ENST00000489484.5_1_7:73588713-73604262:+|nuORF	nc|ENSG00000106682|Q15056-2|EIF4H	nc|ENSG00000106682|Q15056-2|EIF4H	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7422485351562	2	526.742762	1051.47097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.209	1	75.774	75.274	76.274	0.56458								0	0	0	0.36353	1	8532	8532		49.442	5.0644	1				60572	2312	40449	40465	68631	68631					-0.052705565097539875
VEFKNDGQ	8	Unmodified	_VEFKNDGQ_					0	0	0			REV__ENSG00000047365|ENST00000303965|ARAP2	REV__ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.7231140136719	2	468.724707	935.43486	-1.001	-0.0004692	-2.092	-0.00098057	-3.093	-0.0014498	468.7237111234843	78.023	1.0772	78.15	77.878	78.955	0.12695					84	33	4	0	0	0	0.87422	1	7360	7360		30.318	2.4355	1	786850	+		60573	16351	40450	40466	68632	68632					-0.03543968895939997
VEGDPIVAL	9	Unmodified	_VEGDPIVAL_					0	0	0		nc|ENSG00000175221|Q9Y2X0-2|MED16;nc|ENSG00000175221|Q9Y2X0-3|MED16;ENSG00000175221|ENST00000325464|MED16;nc|ENSG00000175221|Q9Y2X0-5|MED16;nc|ENSG00000175221|Q9Y2X0-4|MED16	nc|ENSG00000175221|Q9Y2X0-2|MED16	nc|ENSG00000175221|Q9Y2X0-2|MED16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7552795410156	2	456.755475	911.496398	-0.064177	-2.9313E-05	0.50026	0.0002285	0.43608	0.00019918	456.75543897284	72.478	0.82823	73.028	72.647	73.476	0.55008					52	19	4	0	0	0	0.5393	1	8134	8134		50.025	9.4519	1	663940			60574	7000	40451	40467	68633	68633					0.03710962803347684
VEGENLDLA	9	Unmodified	_VEGENLDLA_					0	0	0		nc|ENSG00000164050|O43157-2|PLXNB1;ENSG00000164050|ENST00000296440|PLXNB1;ENST00000473996.1_1_3:48455270-48456384:-|nuORF	nc|ENSG00000164050|O43157-2|PLXNB1	nc|ENSG00000164050|O43157-2|PLXNB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.2375183105469	2	480.237647	958.460741	-0.56983	-0.00027365	0.48006	0.00023054	-0.089769	-4.311E-05	480.23769823469456	52.221	0.98739	52.888	52.596	53.584	0.66729					47	23	3	0	0	0	0.24527	1	5254	5254		69.628	0.8408	1	1035100			60575	5906	40452	40468	68634	68634					-0.020151194443201348
VEGGQSYNVL	10	Unmodified	_VEGGQSYNVL_					0	0	0			REV__ENSG00000104142|ENST00000220509|VPS18	REV__ENSG00000104142|ENST00000220509|VPS18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.2640380859375	2	533.264196	1064.51384	-0.033655	-1.7947E-05	0.74878	0.0003993	0.71512	0.00038135	533.2644076607186	70.524	0.71483	70.554	70.288	71.003	0.030495					78	35	3	0	0	0	0.86471	1	6669	6669		30.318	1.1477	1	932460	+		60576	17440	40453	40469	68635	68635					-0.015837416616705013
VEGLHEPRSL	10	Unmodified	_VEGLHEPRSL_					0	0	0		ENST00000475640.1_1_3:122437249-122439770:+|nuORF	ENST00000475640.1_1_3:122437249-122439770:+|nuORF	ENST00000475640.1_1_3:122437249-122439770:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8104858398438	2	568.806562	1135.59857	0.6781	0.00038571	1.9026	0.0010822	2.5807	0.0014679	568.8080202660235	79.546	0.50246	79.685	79.434	79.936	0.13884					28	20	2	0	0	0	0.8545	1	7561	7561		36.447	0	1	67131			60577	12327	40454	40470	68636	68636					0.03619628874935188
VEGLPELL	8	Unmodified	_VEGLPELL_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.25164794921875	2	435.252569	868.490584	0.52341	0.00022781	-3.4327	-0.0014941	-2.9093	-0.0012663	435.25099838186384	76.998	3.1682	77.133	75.281	78.449	0.13477					195	119	2	0	0	0	0.85277	1	7177	7177		25.45	0	1	712390			60578	3870	40455	40471	68637	68637					0.05107864291676378
VEGRSLGR	8	Unmodified	_VEGRSLGR_					0	0	0		ENST00000321751.9_1_1:1309740-1310526:-|nuORF;chr1:1374240-1374705|21|48.14|0.42|6.86|-|1|None,AURKAIP1|1;ENST00000338338.9_1_1:1309740-1310620:-|nuORF;ENST00000378853.3_1_1:1309740-1310526:-|nuORF	ENST00000321751.9_1_1:1309740-1310526:-|nuORF	ENST00000321751.9_1_1:1309740-1310526:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2655334472656	2	437.248683	872.482814	0.042643	1.8645E-05	2.5115	0.0010981	2.5541	0.0011168	437.24970793149816	23.672	0.064785	23.766	23.733	23.798	0.094501					4	2	2	0	0	0	0.4196	1	777	777		32.812	3.6629	1	15505			60579	10041	40456	40472	68638	68638					0.041471498147643615
VEGSREYP	8	Unmodified	_VEGSREYP_					0	0	0		nc|ENSG00000133317|Q96DT0-4|LGALS12;nc|ENSG00000133317|Q96DT0-2|LGALS12;ENSG00000133317|ENST00000394618|LGALS12;nc|ENSG00000133317|Q96DT0-6|LGALS12;nc|ENSG00000133317|Q96DT0-3|LGALS12;nc|ENSG00000133317|Q96DT0|LGALS12;nc|ENSG00000133317|Q96DT0-7|LGALS12	nc|ENSG00000133317|Q96DT0-4|LGALS12	nc|ENSG00000133317|Q96DT0-4|LGALS12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.7232666015625	2	468.724707	935.43486	-1.0176	-0.000477	-1.941	-0.00090978	-2.9586	-0.0013868	468.7236481671381	70.265	0.71931	70.303	70.071	70.79	0.038055					54	36	2	0	0	0	0.89043	1	6743	6743		35.618	2.8059	1	311830			60580	3873	40457	40473	68639	68639					-0.03543968895951366
VEGTGASSH	9	Unmodified	_VEGTGASSH_					0	0	0		nc|ENSG00000177752|Q8N8F6-5|YIPF7	nc|ENSG00000177752|Q8N8F6-5|YIPF7	nc|ENSG00000177752|Q8N8F6-5|YIPF7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2999572753906	2	422.693407	843.37226	0.8439	0.00035671	-0.033019	-1.3957E-05	0.81088	0.00034276	422.6915676580306	87.885	0.8987	88.334	87.934	88.833	0.44893					31	21	2	0	0	0	0.20789	1	10353	10353		29.15	0	1	159370			60581	15118	40458	40474	68640	68640					-0.05569114964134769
VEGTRRYS	8	Unmodified	_VEGTRRYS_					0	0	0		ENST00000355155.5_2_8:100025513-100050691:+|nuORF	ENST00000355155.5_2_8:100025513-100050691:+|nuORF	ENST00000355155.5_2_8:100025513-100050691:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23614501953125	2	484.251423	966.488293	-0.89162	-0.00043177	-1.3901	-0.00067314	-2.2817	-0.0011049	484.25086471425124	86.26	0.90166	86.715	86.076	86.978	0.45429					22	21	2	0	0	0	0.4196	1	10138	10138		63.306	11.971	1	224450			60582	10347	40459	40475	68641	68641					0.003708286065716493
VEGVETSLQ	9	Unmodified	_VEGVETSLQ_					0	0	0			REV__nc|ENSG00000125447|Q9NZ52-4|GGA3	REV__nc|ENSG00000125447|Q9NZ52-4|GGA3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.24462890625	2	481.245472	960.476391	0.89844	0.00043237	-0.58984	-0.00028386	0.3086	0.00014851	481.24510499284594	21.017	0.39685	21.086	20.896	21.292	0.068251					24	16	2	0	0	0	0.78058	1	533	533		30.504	1.3541	1	34294	+		60583	18644	40460	40476	68642	68642					-0.005428329272717747
VEGVNIVL	8	Unmodified	_VEGVNIVL_					0	0	0			REV__ENSG00000172716|ENST00000685675|SLFN11	REV__ENSG00000172716|ENST00000685675|SLFN11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.3009338378906	2	421.752736	841.490919	0.55974	0.00023607	-3.5226	-0.0014857	-2.9629	-0.0012496	421.75115791840494	76.846	3.6914	77.246	76.162	79.853	0.39969					139	94	2	0	0	0	0.4196	1	8687	8687		26.693	6.6961	1	289270	+		60584	21848	40461	40477	68643	68643					0.06383284011508294
VEGVVAAPE	9	Unmodified	_VEGVVAAPE_					0	0	0			REV__ENST00000278070.6_1_10:103892805-103892964:+|nuORF	REV__ENST00000278070.6_1_10:103892805-103892964:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.78021240234375	2	435.732	869.449448	-1.636	-0.00071285	1.3386	0.00058326	-0.29742	-0.0001296	435.7329502291335	34.296	0.11856	34.335	34.236	34.355	0.038639					6	4	2	0	0	0	0.20789	1	1719	1719		30.504	5.0535	1	27076	+		60585	24588	40462	40478	68644	68644					0.009501032521825437
VEHAKAYK	8	Unmodified	_VEHAKAYK_					0	0	0		ENST00000294785.9_1_1:160321519-160321564:+|nuORF	ENST00000294785.9_1_1:160321519-160321564:+|nuORF	ENST00000294785.9_1_1:160321519-160321564:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	473.2579650878906	2	473.261259	944.507966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.148	1	45.148	44.648	45.648	0								0	0	0	0.29245	1	3317	3317		30.504	0	1				60586	9709	40463	40479	68645	68645					0.033492046173250856
VEHIISFLPVR	11	Unmodified	_VEHIISFLPVR_					0	0	0		nc|ENSG00000106336|O75426-2|FBXO24;nc|ENSG00000106336|O75426-4|FBXO24;ENSG00000106336|ENST00000241071|FBXO24;nc|ENSG00000106336|O75426-3|FBXO24;ENST00000474649.1_1_7:100184248-100189648:+|nuORF	nc|ENSG00000106336|O75426-2|FBXO24	nc|ENSG00000106336|O75426-2|FBXO24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.25714111328125	3	437.259079	1308.75541	-1.4866	-0.00065002	-2.4798	-0.0010843	-3.9663	-0.0017343	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.69071	1	10259	10259		33.039	0	1	981430			60587	2289	40464	40480	68646	68646					0.11337913765260055
VEHVPGADIL	10	Unmodified	_VEHVPGADIL_					0	0	0		nc|ENSG00000120690|P32519-2|ELF1;ENSG00000120690|ENST00000239882|ELF1	nc|ENSG00000120690|P32519-2|ELF1	nc|ENSG00000120690|P32519-2|ELF1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2838745117188	2	525.284931	1048.55531	0.66658	0.00035014	-0.86494	-0.00045434	-0.19836	-0.0001042	525.284599336858	56.594	0.68504	57.154	56.92	57.605	0.55954					42	15	4	0	0	0	0.4892	1	5882	5882		56.721	8.8055	1	574180			60588	3144	40465	40481	68647	68647					0.03297439097673305
VEHVVSGL	8	Unmodified	_VEHVVSGL_					0	0	0			REV__ENSG00000103047|ENST00000261778|TANGO6	REV__ENSG00000103047|ENST00000261778|TANGO6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.235107421875	2	420.23471	838.454868	0.036063	1.5155E-05	0.14225	5.9776E-05	0.17831	7.4931E-05	420.2345705341308	38.815	0.57835	38.787	38.496	39.074	-0.027843					22	12	2	0	0	0	0.79972	1	2649	2649		62.978	2.0065	1	126260	+		60589	17382	40466	40482	68648	68648					0.029178268346868208
VEIEASEVR	9	Unmodified	_VEIEASEVR_					0	0	0			REV__nc|ENSG00000104064|Q06547-4|GABPB1	REV__nc|ENSG00000104064|Q06547-4|GABPB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2722778320312	2	516.272021	1030.52949	-0.37339	-0.00019277	-1.4277	-0.00073706	-1.801	-0.00092983	516.2719742044372	48.676	0.67983	49.143	48.785	49.465	0.46639					30	16	3	0	0	0	0.41566	1	4707	4707		56.721	6.6965	1	671950	+		60590	29752	40467	40483	68649	68649					0.01544544855391905
VEIEASEVR	9	Unmodified	_VEIEASEVR_					0	0	0			REV__nc|ENSG00000104064|Q06547-4|GABPB1	REV__nc|ENSG00000104064|Q06547-4|GABPB1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	516.272021	1030.52949	-0.37339	-0.00019277	-1.4277	-0.00073706	-1.801	-0.00092983	516.2719742044372	48.676	0.67983	49.143	48.785	49.465	0.46639	0	0	NaN	56.721	30	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	671950	+		60591	29752	40467	40483							0.01544544855391905
VEIICLVCA	9	Unmodified	_VEIICLVCA_					0	0	0		ENST00000381249.3_1_2:18736013-18736163:-|nuORF	ENST00000381249.3_1_2:18736013-18736163:-|nuORF	ENST00000381249.3_1_2:18736013-18736163:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.7562561035156	2	481.756107	961.49766	-0.58942	-0.00028396	1.5732	0.00075792	0.98382	0.00047396	481.75665787402625	57.408	0.79066	57.392	57.106	57.897	-0.01643					68	40	2	0	0	0	0.76996	1	4865	4865		33.516	1.5607	1	310440			60592	10950	40468	40484	68650	68650					0.015371375762128991
VEIVKSHIVI	10	Unmodified	_VEIVKSHIVI_					0	0	0		ENST00000267890.10_3_15:43034669-43034843:-|nuORF	ENST00000267890.10_3_15:43034669-43034843:-|nuORF	ENST00000267890.10_3_15:43034669-43034843:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8543090820312	2	568.855524	1135.69649	-1.3907	-0.00079112	-2.9165	-0.001659	-4.3072	-0.0024502	568.853778133904	102.17	3.5256	102.31	101.8	105.32	0.13569					359	87	6	0	0	0	0.86272	1	10849	10849		24.519	1.4767	1	72465000			60593	9532	40469	40485	68651	68651					0.1340743747093711
VEKDGIKIY	9	Unmodified	_VEKDGIKIY_					0	0	0			REV__ENSG00000187775|ENST00000389840|DNAH17	REV__ENSG00000187775|ENST00000389840|DNAH17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.7838134765625	2	532.802957	1063.59136	-0.18624	-9.923E-05	0.17563	9.3578E-05	-0.010608	-5.6519E-06	532.8030048860445	78.673	0.59195	79.236	78.91	79.502	0.56332					23	13	2	0	0	0	0.20789	1	9016	9016		32.812	7.2384	1	264160	+		60594	22946	40470	40486	68652	68652					0.062108962745242025
VEKGGEGQRSW	11	Unmodified	_VEKGGEGQRSW_					0	0	0			REV__ENST00000259006.7_2_17:61775806-61775887:-|nuORF	REV__ENST00000259006.7_2_17:61775806-61775887:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	616.802490234375	2	616.804551	1231.59455	-0.010546	-6.505E-06	-2.3034	-0.0014208	-2.314	-0.0014273	616.8025148850035	30.489	0.70992	30.514	30.256	30.966	0.025013					35	21	2	0	0	0	0.732	1	1594	1594		26.063	0.48933	1	71476	+		60595	24359	40471	40487	68653	68653					-0.01198460618752506
VEKKKIEK	8	Unmodified	_VEKKKIEK_					0	0	0			REV__nc|ENSG00000111247|Q96B01-3|RAD51AP1	REV__nc|ENSG00000111247|Q96B01-3|RAD51AP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.79388427734375	2	501.321317	1000.62808	0.39363	0.00019733	1.8265	0.00091564	2.2201	0.001113	501.3227984070936	18.933	0.25109	18.303	18.107	18.358	-0.6296					7	5	2	0	0	0	0.4196	1	435	435		35.618	5.1146	1	18992	+		60596	17853	40472	40488	68654	68654					0.1277919289109377
VEKKKQKTT	9	Unmodified	_VEKKKQKTT_					0	0	0		ENST00000602480.1_12:7187736-7187799:-|nuORF	ENST00000602480.1_12:7187736-7187799:-|nuORF	ENST00000602480.1_12:7187736-7187799:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3170166015625	2	545.334956	1088.65536	0.15379	8.3867E-05	0.31086	0.00016952	0.46465	0.00025339	545.336518206327	90.616	0.38911	90.834	90.71	91.099	0.21737					13	9	2	0	0	0	0.20789	1	9130	9130		27.882	13.745	1	151030			60597	14406	40473	40489	68655	68655					0.11457676431473374
VEKKTFANLLS	11	Unmodified	_VEKKTFANLLS_					0	0	0			REV__nc|ENSG00000162105|Q9UPX8-1|SHANK2	REV__nc|ENSG00000162105|Q9UPX8-1|SHANK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.3688354492188	2	625.36117	1248.70779	4.03	0.0025202	3.9969	0.0024995	8.0269	0.0050197	625.3635366275834	103.44	0.6306	103.71	103.46	104.09	0.26524					25	14	2	0	0	0	0.65746	1	12595	12595		37.812	0	1	5387700	+		60598	29973	40474	40490	68656	68656					0.09338214774425069
VEKLIELL	8	Unmodified	_VEKLIELL_					0	0	0			REV__ENSG00000187672|ENST00000288221|ERC2	REV__ENSG00000187672|ENST00000288221|ERC2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8055725097656	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.715	1	42.679	42.179	43.179	-0.036591								0	0	0	0.29596	1	3301	3301		35.618	3.6634	1		+		60599	15811	40475	40491	68657	68657					0.11580985768239316
VEKLIIPG	8	Unmodified	_VEKLIIPG_					0	0	0			REV__ENSG00000196090|ENST00000373187|PTPRT;REV__ENST00000531050.5_1_6:128321419-128718758:-|nuORF	REV__ENSG00000196090|ENST00000373187|PTPRT	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2999267578125	2	434.778754	867.542954	-1.2354	-0.00053711	3.9985	0.0017385	2.7631	0.0012013	434.78064836424335	71.063	1.6424	71.139	70.829	72.471	0.076225					96	69	2	0	0	0	0.4196	1	6453	6453		47.916	9.1095	1	80392	+		60600	23087;20319	40476	40492	68658	68658					0.10388447425282266
VEKLLLRR	8	Unmodified	_VEKLLLRR_					0	0	0		ENST00000490885.6_1_1:186645551-186649536:-|nuORF;ENSG00000073756|ENST00000367468|PTGS2	ENST00000490885.6_1_1:186645551-186649536:-|nuORF	ENST00000490885.6_1_1:186645551-186649536:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8425903320312	2	513.842751	1025.67095	-0.043039	-2.2115E-05	0.34285	0.00017617	0.29981	0.00015405	513.8427281190492	21.509	0.50888	21.444	21.265	21.774	-0.064743					30	16	3	0	0	0	0.87479	1	631	631		30.504	0	1	68803			60601	1298	40477	40493	68659	68659					0.15914007739161207
VEKLVKGK	8	Unmodified	_VEKLVKGK_					0	0	0		nc|ENSG00000084764|Q9UPY8-2|MAPRE3;ENSG00000084764|ENST00000233121|MAPRE3	nc|ENSG00000084764|Q9UPY8-2|MAPRE3	nc|ENSG00000084764|Q9UPY8-2|MAPRE3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7445983886719	2	450.797478	899.580402	-0.07603	-3.4274E-05	-0.52801	-0.00023802	-0.60404	-0.0002723	450.7975498352129	34.471	0.3492	34.466	34.259	34.608	-0.0047379					10	8	2	0	0	0	0.4196	1	2084	2084		10.866	3.6722	1	19899			60602	1525	40478	40494	68660	68660					0.12659538690900263
VEKNSQRKKKV	11	Unmodified	_VEKNSQRKKKV_					0	0	0		ENSG00000214866|ENST00000399143|DCDC2C	ENSG00000214866|ENST00000399143|DCDC2C	ENSG00000214866|ENST00000399143|DCDC2C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.9444885253906	3	448.60877	1342.80448	-1.3368	-0.0005997	2.6733	0.0011993	1.3365	0.00059957	448.60975879741926	77.285	1.2875	77.285	77.023	78.311	0					128	61	3	0	0	0	0.78083	1	7099	7099		15.337	0.55867	1	598490			60603	8640	40479	40495	68661	68661					0.14679202054207963
VEKQVNGP	8	Unmodified	_VEKQVNGP_					0	0	0			REV__ENSG00000109919|ENST00000302503|MTCH2	REV__ENSG00000109919|ENST00000302503|MTCH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7780456542969	2	435.737617	869.460681	0.15256	6.6476E-05	-0.023654	-1.0307E-05	0.1289	5.6169E-05	435.73756567295544	36.019	0.60062	36.122	35.842	36.443	0.10306					26	18	2	0	0	0	0.4196	1	1941	1941		17.365	0	1	99988	+		60604	17780	40480	40496	68662	68662					0.02072925346340071
VEKRKNHLAL	10	Unmodified	_VEKRKNHLAL_					0	0	0			REV__ENSG00000104321|ENST00000262209|TRPA1	REV__ENSG00000104321|ENST00000262209|TRPA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3663940429688	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.85438	1	12787	12787		16.473	0	1	3346600	+		60605	17446	40481	40497	68663	68663					0.12459876308275852
VEKSTALH	8	Unmodified	_VEKSTALH_					0	0	0		ENSG00000163492|ENST00000443758|CCDC141;nc|ENSG00000163492|Q6ZP82-1|CCDC141;ENST00000480419.1_1_2:179698902-179710451:-|nuORF	ENSG00000163492|ENST00000443758|CCDC141	ENSG00000163492|ENST00000443758|CCDC141	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.74481201171875	2	442.745442	883.476331	0.24971	0.00011056	-1.799	-0.0007965	-1.5493	-0.00068594	442.74454650481835	88.729	0.69301	89.178	88.753	89.446	0.44892					54	16	4	0	0	0	0.88944	1	10459	10459		57.811	6.4758	1	6816600			60606	5807	40482	40498	68664	68664					0.029932118633610116
VEKSTALH	8	Unmodified	_VEKSTALH_					0	0	0		ENSG00000163492|ENST00000443758|CCDC141;nc|ENSG00000163492|Q6ZP82-1|CCDC141;ENST00000480419.1_1_2:179698902-179710451:-|nuORF	ENSG00000163492|ENST00000443758|CCDC141	ENSG00000163492|ENST00000443758|CCDC141	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.74468994140625	2	442.745442	883.476331	0.39735	0.00017592	-1.8334	-0.00081175	-1.4361	-0.00063583	442.74450802650625	89.278	0.7365	89.729	89.448	90.184	0.45058					60	17	4	0	0	0	0.93786	1	10543	10543		53.351	0	1	3535200			60607	5807	40482	40498	68665	68665					0.029932118633610116
VEKSTALH	8	Unmodified	_VEKSTALH_					0	0	0		ENSG00000163492|ENST00000443758|CCDC141;nc|ENSG00000163492|Q6ZP82-1|CCDC141;ENST00000480419.1_1_2:179698902-179710451:-|nuORF	ENSG00000163492|ENST00000443758|CCDC141	ENSG00000163492|ENST00000443758|CCDC141	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.74481201171875	2	442.745442	883.476331	-1.2184	-0.00053945	-0.16486	-7.2993E-05	-1.3833	-0.00061244	442.74523759961534	89.283	0.76672	89.754	89.476	90.243	0.47068					54	18	4	0	0	0	0.89962	1	10583	10583		38.806	1.647	1	4305700			60608	5807	40482	40498	68666	68666					0.029932118633610116
VELASIAH	8	Unmodified	_VELASIAH_					0	0	0		ENSG00000123594|ENST00000380622|ATXN3L	ENSG00000123594|ENST00000380622|ATXN3L	ENSG00000123594|ENST00000380622|ATXN3L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2352600097656	2	420.23471	838.454868	0.72887	0.0003063	-0.40206	-0.00016896	0.32681	0.00013734	420.23432070824424	38.593	0.61893	38.605	38.358	38.976	0.011173					28	13	3	0	0	0	0.94132	1	2674	2674		54.765	2.4655	1	144400			60609	3283	40483	40499	68667	68667					0.02917826834675452
VELEQAKP	8	Unmodified	_VELEQAKP_					0	0	0			REV__ENST00000444428.5_3_7:1040118-1094922:-|nuORF	REV__ENST00000444428.5_3_7:1040118-1094922:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.25439453125	2	457.2531	912.491647	-1.0616	-0.00048543	1.5052	0.00068825	0.44356	0.00020282	457.25362094838925	31.811	1.3336	31.937	31.344	32.677	0.12643					58	30	4	0	0	0	0.89962	1	2167	2167		38.806	3.1879	1	534050	+		60610	26373	40484	40500	68668	68668					0.03190078660566087
VELEQAKP	8	Unmodified	_VELEQAKP_					0	0	0			REV__ENST00000444428.5_3_7:1040118-1094922:-|nuORF	REV__ENST00000444428.5_3_7:1040118-1094922:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2533874511719	2	457.2531	912.491647	0.39374	0.00018004	-0.058535	-2.6765E-05	0.3352	0.00015327	457.25287569992605	31.678	1.0685	31.785	31.377	32.446	0.10707					47	24	3	0	0	0	0.92457	1	2192	2192		47.916	0.25827	1	574200	+		60611	26373	40484	40500	68669	68669					0.03190078660566087
VELGLTHY	8	Unmodified	_VELGLTHY_					0	0	0			REV__nc|ENSG00000007541|Q9BRB3|PIGQ	REV__nc|ENSG00000007541|Q9BRB3|PIGQ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.24749755859375	2	466.247818	930.481082	-0.24224	-0.00011294	0.4755	0.0002217	0.23326	0.00010876	466.24800521101633	55.085	0.7948	55.653	55.362	56.157	0.56836					29	18	2	0	0	0	0.91005	1	5644	5644		42.474	0.078325	1	472970	+		60612	29672	40485	40501	68670	68670					0.013060960061238802
VELHLAGT	8	Unmodified	_VELHLAGT_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.23486328125	2	420.23471	838.454868	-1.214	-0.00051016	1.5502	0.00065144	0.3362	0.00014128	420.2350769123264	38.639	0.62205	38.592	38.33	38.952	-0.047001					29	13	3	0	0	0	0.67263	1	2728	2728		68.485	2.6815	1	100740			60613	3201	40486	40502	68671	68671					0.029178268346640834
VELHRENSV	9	Unmodified	_VELHRENSV_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.7852783203125	2	541.783087	1081.55162	-0.22268	-0.00012064	4.2763	0.0023168	4.0536	0.0021962	541.7852590351226	56.903	1.7601	56.891	56.59	58.35	-0.012203					157	62	4	0	0	0	0.057432	2	5131	5131;5201		104.75	14.377	1	5602900	+		60614	16368	40487	40503	68672;68673	68672					0.014107693237974672
VELHRENSV	9	Unmodified	_VELHRENSV_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.7849731445312	2	541.783087	1081.55162	-0.1772	-9.6005E-05	4.2322	0.0022929	4.055	0.0021969	541.7852873202811	56.84	2.4261	56.873	56.56	58.986	0.033184					182	81	4	0	0	0	0.21969	1	5180	5180		71.877	3.3928	1	6132200	+		60615	16368	40487	40503	68674	68674					0.014107693237974672
VELILIQV	8	Unmodified	_VELILIQV_					0	0	0			REV__nc|ENSG00000274150|A8MWK0|FADS2B	REV__nc|ENSG00000274150|A8MWK0|FADS2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8001403808594	2	463.799686	925.584819	-1.1872	-0.0005506	2.6442	0.0012264	1.4571	0.00067579	463.80074391702703	41.648	1.5471	41.608	41.079	42.626	-0.039845					90	38	3	0	0	0	0.87479	1	3195	3195		30.504	5.0535	1	510860	+		60616	30265	40488	40504	68675	68675					0.11905003113815837
VELKAPVL	8	Unmodified	_VELKAPVL_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7792663574219	2	434.778754	867.542954	0.76603	0.00033306	3.2628	0.0014186	4.0288	0.0017516	434.77972097925357	57.028	2.3704	57.061	56.581	58.952	0.033184					147	79	3	0	0	0	0.86288	1	5260	5260		26.796	0	1	337650	+		60617	20437;29946	40489	40505	68676	68676					0.10388447425270897
VELKKTDY	8	Unmodified	_VELKKTDY_					0	0	0		ENST00000339020.7_1_5:60456939-60457023:-|nuORF	ENST00000339020.7_1_5:60456939-60457023:-|nuORF	ENST00000339020.7_1_5:60456939-60457023:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.3063659667969	2	498.274032	994.533512	-1.6156	-0.00080501	1.1393	0.00056767	-0.47633	-0.00023734	498.2746559556303	55.31	0.44782	55.337	55.201	55.649	0.027142					16	10	2	0	0	0	0.4196	1	4960	4960		42.396	9.5837	1	72581			60618	10211	40490	40506	68677	68677					0.03602634349078926
VELKKTDY	8	Unmodified	_VELKKTDY_					0	0	0		ENST00000339020.7_1_5:60456939-60457023:-|nuORF	ENST00000339020.7_1_5:60456939-60457023:-|nuORF	ENST00000339020.7_1_5:60456939-60457023:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	498.274032	994.533512	-0.024755	-1.2335E-05	0.66338	0.00033054	0.63862	0.00031821	498.27437643497893	55.308	0.41949	55.3	55.121	55.541	-0.0077095	-0.024013	-0.00011288	NaN	51.335	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81155			60619	10211	40490	40506							0.03602634349078926
VELKKTDY	8	Unmodified	_VELKKTDY_					0	0	0		ENST00000339020.7_1_5:60456939-60457023:-|nuORF	ENST00000339020.7_1_5:60456939-60457023:-|nuORF	ENST00000339020.7_1_5:60456939-60457023:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	498.274032	994.533512	-0.36806	-0.00018339	0.46042	0.00022941	0.09236	4.6021E-05	498.2742651185295	55.362	0.50167	55.335	55.094	55.596	-0.027279	0.010891	-0.00031514	NaN	51.335	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98169			60620	10211	40490	40506							0.03602634349078926
VELKSKALHER	11	Unmodified	_VELKSKALHER_					0	0	0			REV__nc|ENSG00000159337|Q86XP0-2|PLA2G4D	REV__nc|ENSG00000159337|Q86XP0-2|PLA2G4D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.5917663574219	3	437.257738	1308.75138	-1.8163	-0.00079418	0.93317	0.00040803	-0.8831	-0.00038614	437.2580894693445	99.183	2.5872	99.369	98.322	100.91	0.18581					159	59	3	0	0	0	0.69687	1	10353	10353		32.034	7.8023	1	447430	+		60621	20655	40491	40507	68678	68678					0.10935824271541605
VELMPNGLRGL	11	Unmodified	_VELMPNGLRGL_					0	0	0		nc|ENSG00000100170|P13866-2|SLC5A1;ENSG00000100170|ENST00000266088|SLC5A1	nc|ENSG00000100170|P13866-2|SLC5A1	nc|ENSG00000100170|P13866-2|SLC5A1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.2392578125	3	400.225269	1197.65398	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.637	1	19.708	19.208	20.208	0.070713								0	0	0	0.56276	1	438	438		30.569	1.0181	1				60622	1805	40492	40508	68679	68679					0.06305719071042404
VELPEAKIVPL	11	Unmodified	_VELPEAKIVPL_					0	0	0			REV__ENSG00000157613|ENST00000621158|CREB3L1	REV__ENSG00000157613|ENST00000621158|CREB3L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3662109375	2	604.368464	1206.72238	0.90473	0.00054679	-4.275	-0.0025837	-3.3703	-0.0020369	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.74763	1	11412	11412		22.58	0.89391	1	105740000	+		60623	20555	40493	40509	68680	68680					0.1272828692258372
VELPEAKIVPL	11	Unmodified	_VELPEAKIVPL_					0	0	0			REV__ENSG00000157613|ENST00000621158|CREB3L1	REV__ENSG00000157613|ENST00000621158|CREB3L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.366455078125	2	604.368464	1206.72238	-1.2751	-0.00077064	-1.2835	-0.00077571	-2.5586	-0.0015464	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.75921	1	12819	12819		19.997	0	1	3346600	+		60624	20555	40493	40509	68681	68681					0.1272828692258372
VELPKLGL	8	Unmodified	_VELPKLGL_					0	0	0			REV__ENSG00000175467|ENST00000312397|SART1	REV__ENSG00000175467|ENST00000312397|SART1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7791442871094	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.91005	1	3924	3924		42.474	0	1	1803700	+		60625	22068	40494	40510	68682	68682					0.10388447425270897
VELVGPRLPG	10	Unmodified	_VELVGPRLPG_					0	0	0		nc|ENSG00000105227|Q9BXM0-3|PRX;ENST00000291825.11_2_19:40899875-40904000:-|nuORF;ENSG00000105227|ENST00000324001|PRX	nc|ENSG00000105227|Q9BXM0-3|PRX	nc|ENSG00000105227|Q9BXM0-3|PRX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.8102416992188	2	518.811116	1035.60768	1.9162	0.00099417	-3.4611	-0.0017957	-1.5449	-0.0008015	518.8092155721775	97.732	0.78409	98.117	97.598	98.382	0.38548					48	18	3	0	0	0	0.51302	1	11741	11741		54.776	5.3348	1	3656200			60626	2192	40495	40511	68683	68683					0.09130022231261137
VEMKLLDK	8	Unmodified	_VEMKLLDK_					0	0	0			REV__ENSG00000167083|ENST00000507680|GNGT2	REV__ENSG00000167083|ENST00000507680|GNGT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7586975097656	2	488.280803	974.547053	0.30783	0.00015031	-1.153	-0.00056299	-0.84518	-0.00041269	488.28102939511524	24.317	0.17804	23.936	23.794	23.972	-0.38178					5	3	2	0	0	0	0.4196	1	1159	1159		24.203	0	1	15937	+		60627	21352	40496	40512	68684	68684					0.058761688566846715
VENDISKWK	9	Unmodified	_VENDISKWK_					0	0	0		ENSG00000111859|ENST00000379446|NEDD9;nc|ENSG00000111859|Q14511-3|NEDD9	ENSG00000111859|ENST00000379446|NEDD9	ENSG00000111859|ENST00000379446|NEDD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	559.7932739257812	2	559.795663	1117.57677	0.45473	0.00025456	-4.3689	-0.0024457	-3.9142	-0.0021911	559.7931839880965	32.135	0.48248	32.129	31.805	32.287	-0.0061455					18	10	2	0	0	0	0.78912	1	1810	1810		28.081	0	1	62188			60628	2617	40497	40513	68685	68685					0.022688241263722375
VENYRFRQ	8	Unmodified	_VENYRFRQ_					0	0	0			REV__ENSG00000198626|ENST00000366574|RYR2	REV__ENSG00000198626|ENST00000366574|RYR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.789794921875	2	556.285797	1110.55704	-0.68961	-0.00038362	-0.74588	-0.00041492	-1.4355	-0.00079854	556.2850160238362	45.599	0.83355	46.494	46.208	47.042	0.89542					50	20	4	0	0	0	0.93529	1	4294	4294		52.299	0.96372	1	4958900	+		60629	23347	40498	40514	68686	68686					0.00618492906278334
VEPADADPH	9	Unmodified	_VEPADADPH_					0	0	0			REV__ENSG00000177853|ENST00000316045|ZNF518A	REV__ENSG00000177853|ENST00000316045|ZNF518A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.2314147949219	2	475.714339	949.414125	-1.0756	-0.00051168	-2.2245	-0.0010582	-3.3001	-0.0015699	475.71328029478207	79.129	0.5112	79.678	79.488	79.999	0.54945					17	11	2	0	0	0	0.20789	1	9086	9086		40.573	18.87	1	45490	+		60630	22232	40499	40515	68687	68687					-0.06260559275631294
VEPAPPGRPE	10	Unmodified	_VEPAPPGRPE_					0	0	0			REV__ENSG00000228570|ENST00000429984|NUTM2E;REV__nc|ENSG00000188152|Q5VZR2-2|NUTM2G	REV__ENSG00000228570|ENST00000429984|NUTM2E	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.82666015625	2	524.774731	1047.53491	2.9123	0.0015283	-4.4664	-0.0023439	-1.5541	-0.00081556	524.7717578060203	99.557	0.20339	99.503	99.32	99.524	-0.053741					6	4	2	0	0	0	0.37624	1	10773	10773		41.427	2.1738	1	41231	+		60631	22987;18923	40500	40516	68688	68688					0.013042684378660852
VEPEKKISVPI	11	Unmodified	_VEPEKKISVPI_					0	0	0			REV__nc|ENSG00000065613|Q9H2G2-2|SLK	REV__nc|ENSG00000065613|Q9H2G2-2|SLK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8693237304688	2	619.871371	1237.72819	-0.30615	-0.00018977	-2.7556	-0.0017081	-3.0618	-0.0018979	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.55601	1	10131	10131		47.96	1.9873	1	4796900	+		60632	16506	40501	40517	68689	68689					0.11883385434225602
VEPEKKISVPI	11	Unmodified	_VEPEKKISVPI_					0	0	0			REV__nc|ENSG00000065613|Q9H2G2-2|SLK	REV__nc|ENSG00000065613|Q9H2G2-2|SLK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.868896484375	2	619.871371	1237.72819	-1.2246	-0.00075908	-2.122	-0.0013154	-3.3466	-0.0020745	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.72106	1	9409	9409		28.081	2.5074	1	3118800	+		60633	16506	40501	40517	68690	68690					0.11883385434225602
VEPKLPIDSLK	11	Unmodified	_VEPKLPIDSLK_					0	0	0			REV__ENSG00000136478|ENST00000584379|TEX2	REV__ENSG00000136478|ENST00000584379|TEX2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8692016601562	2	619.871371	1237.72819	-0.2143	-0.00013284	-3.0246	-0.0018748	-3.2389	-0.0020077	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.73621	1	9309	9309		25.126	0.6068	1	1169100	+		60634	19313	40502	40518	68691	68691					0.11883385434225602
VEPLDMPDIT	10	Unmodified	_VEPLDMPDIT_					0	0	0		ENSG00000177875|ENST00000316554|CCDC184	ENSG00000177875|ENST00000316554|CCDC184	ENSG00000177875|ENST00000316554|CCDC184	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.3090209960938	2	565.275915	1128.53728	0.57169	0.00032316	-3.2267	-0.001824	-2.655	-0.0015008	565.2737161802477	74.702	0.36581	75.267	75.048	75.413	0.56458					14	8	2	0	0	0	0.37624	1	8435	8435		10.265	0	1	154440			60635	7167	40503	40519	68692	68692					-0.021850639393505844
VEPLTKLLTH	10	Unmodified	_VEPLTKLLTH_					0	0	0		nc|ENSG00000165309|Q5W041-3|ARMC3;nc|ENSG00000165309|Q5W041-4|ARMC3;ENSG00000165309|ENST00000298032|ARMC3;ENST00000483596.5_1_10:23220925-23250957:+|nuORF;nc|ENSG00000165309|Q5W041-5|ARMC3	nc|ENSG00000165309|Q5W041-3|ARMC3	nc|ENSG00000165309|Q5W041-3|ARMC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8432006835938	2	575.845156	1149.67576	0.60609	0.00034901	-4.3948	-0.0025308	-3.7888	-0.0021817	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.86763	1	8966	8966		26.693	0	1	2381900			60636	6070	40504	40520	68693	68693					0.10690847091291289
VEPLTKLLTH	10	Unmodified	_VEPLTKLLTH_					0	0	0		nc|ENSG00000165309|Q5W041-3|ARMC3;nc|ENSG00000165309|Q5W041-4|ARMC3;ENSG00000165309|ENST00000298032|ARMC3;ENST00000483596.5_1_10:23220925-23250957:+|nuORF;nc|ENSG00000165309|Q5W041-5|ARMC3	nc|ENSG00000165309|Q5W041-3|ARMC3	nc|ENSG00000165309|Q5W041-3|ARMC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8425903320312	2	575.845156	1149.67576	-1.368	-0.00078774	-2.3653	-0.001362	-3.7333	-0.0021498	575.8436459594299	90.372	2.9394	90.548	88.581	91.52	0.1758					221	69	4	0	0	0	0.86471	1	8922	8922		30.318	3.6248	1	2135900			60637	6070	40504	40520	68694	68694					0.10690847091291289
VEPLTKLLTH	10	Unmodified	_VEPLTKLLTH_					0	0	0		nc|ENSG00000165309|Q5W041-3|ARMC3;nc|ENSG00000165309|Q5W041-4|ARMC3;ENSG00000165309|ENST00000298032|ARMC3;ENST00000483596.5_1_10:23220925-23250957:+|nuORF;nc|ENSG00000165309|Q5W041-5|ARMC3	nc|ENSG00000165309|Q5W041-3|ARMC3	nc|ENSG00000165309|Q5W041-3|ARMC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8424072265625	2	575.845156	1149.67576	-1.7423	-0.0010033	-1.744	-0.0010043	-3.4863	-0.0020076	575.8440322234329	89.414	1.3384	89.884	88.876	90.214	0.47068					71	32	3	0	0	0	0.44803	1	10622	10622		60.118	5.3419	1	615790			60638	6070	40504	40520	68695	68695					0.10690847091291289
VEPLTKLLTH	10	Unmodified	_VEPLTKLLTH_					0	0	0		nc|ENSG00000165309|Q5W041-3|ARMC3;nc|ENSG00000165309|Q5W041-4|ARMC3;ENSG00000165309|ENST00000298032|ARMC3;ENST00000483596.5_1_10:23220925-23250957:+|nuORF;nc|ENSG00000165309|Q5W041-5|ARMC3	nc|ENSG00000165309|Q5W041-3|ARMC3	nc|ENSG00000165309|Q5W041-3|ARMC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.843017578125	2	575.845156	1149.67576	-1.6501	-0.00095021	-2.5974	-0.0014957	-4.2475	-0.0024459	575.8434791868526	90.193	1.8473	90.663	90.18	92.028	0.47068					146	46	4	0	0	0	0.86471	1	10835	10835		30.318	5.7985	1	1810000			60639	6070	40504	40520	68696	68696					0.10690847091291289
VEPPLKAVM	9	Unmodified	_VEPPLKAVM_					0	0	0		ENSG00000164070|ENST00000296464|HSPA4L	ENSG00000164070|ENST00000296464|HSPA4L	ENSG00000164070|ENST00000296464|HSPA4L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.7889099121094	2	492.283346	982.552139	5.5423	0.0027284	3.7106	0.0018267	9.253	0.0045551	492.2850026312267	110.46	0.92664	110.53	110.23	111.16	0.068001					58	34	2	0	0	0	0.78058	1	13422	13422		30.504	1.3541	1	236270			60640	5910	40505	40521	68697	68697					0.06016472719295507
VEPVLDYLTF	10	Unmodified	_VEPVLDYLTF_					0	0	0		ENSG00000115267|ENST00000649979|IFIH1;nc|ENSG00000115267|Q9BYX4-2|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	ENSG00000115267|ENST00000649979|IFIH1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.7931518554688	2	598.315897	1194.61724	-0.38811	-0.00023221	2.0649	0.0012355	1.6768	0.0010033	598.3168560397769	53.071	0.86907	53.685	53.2	54.069	0.61436					35	20	3	0	0	0	0.37624	1	5404	5404		19.997	0	1	592030			60641	2827	40506	40522	68698	68698					0.02771745726113295
VEPYVLKSL	9	Unmodified	_VEPYVLKSL_					0	0	0			REV__ENSG00000156222|ENST00000394573|SLC28A1	REV__ENSG00000156222|ENST00000394573|SLC28A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8269653320312	2	524.307875	1046.6012	0.81712	0.00042842	-3.4678	-0.0018182	-2.6507	-0.0013898	524.3058249587701	99.717	0.4827	99.868	99.679	100.16	0.15073					13	10	2	0	0	0	0.20789	1	10400	10400		40.778	3.6191	1	46235	+		60642	20475	40507	40523	68699	68699					0.07976084279880524
VEQELQRV	8	Unmodified	_VEQELQRV_					0	0	0		ENSG00000206113|ENST00000635017|CFAP99	ENSG00000206113|ENST00000635017|CFAP99	ENSG00000206113|ENST00000635017|CFAP99	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	500.77606201171875	2	500.774731	999.534909	-0.57961	-0.00029025	0.52797	0.0002644	-0.051635	-2.5858E-05	500.77496345049894	50.6	0.57563	50.629	50.343	50.919	0.029629					31	17	2	0	0	0	0.88601	1	3994	3994		34.173	1.3601	1	273720			60643	8553	40508	40524	68700	68700					0.03512268437862076
VEQHSLLPV	9	Unmodified	_VEQHSLLPV_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3;REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.2864685058594	2	511.287474	1020.5604	-1.5518	-0.0007934	0.65042	0.00033255	-0.90135	-0.00046085	511.28763661664226	41.815	1.2851	41.815	41.359	42.644	0					75	31	4	0	0	0	0.15959	2	2870	2870;2895		82.241	2.7895	1	1825200	+		60644	17350;22851	40509	40525	68701;68702	68701					0.05093742960286818
VEQHSLLPV	9	Unmodified	_VEQHSLLPV_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3;REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	511.2865295410156	2	511.287474	1020.5604	0.36299	0.00018559	-1.6305	-0.00083365	-1.2675	-0.00064806	511.28657650841876	42.002	2.0595	41.971	41.461	43.521	-0.030987					111	49	5	0	0	0	0.07589	1	3132	3132		98.629	2.4389	1	6140800	+		60645	17350;22851	40509	40525	68703	68703					0.05093742960286818
VEQHSLLPV	9	Unmodified	_VEQHSLLPV_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3;REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2865295410156	2	511.287474	1020.5604	-0.92708	-0.000474	-0.33784	-0.00017274	-1.2649	-0.00064674	511.2872429876972	41.91	2.375	41.872	41.45	43.825	-0.038223					133	56	5	0	0	0	0.026451	4	3175	3175;3225;3275;3285		120.62	14.459	1	7049200	+		60646	17350;22851	40509	40525	68704;68705;68706;68707	68704					0.05093742960286818
VEQHSLLPV	9	Unmodified	_VEQHSLLPV_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3;REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.2866516113281	2	511.287474	1020.5604	-1.2853	-0.00065715	-0.086664	-4.431E-05	-1.3719	-0.00070146	511.2874104215347	41.926	2.0437	41.929	41.503	43.546	0.0034142					109	48	4	0	0	0	0.084975	3	3131	3131;3169;3194		96.19	10.925	1	7262400	+		60647	17350;22851	40509	40525	68708;68709;68710	68708					0.05093742960286818
VEQHSLLPV	9	Unmodified	_VEQHSLLPV_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3;REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	511.28594970703125	2	511.287474	1020.5604	-0.43839	-0.00022414	-0.24891	-0.00012726	-0.68729	-0.0003514	511.2870812500734	41.969	0.73903	41.973	41.619	42.358	0.0043983					43	18	3	0	0	0	0.71772	1	2777	2777		39.253	3.6345	1	753980	+		60648	17350;22851	40509	40525	68711	68711					0.05093742960286818
VEQHSLLPV	9	Unmodified	_VEQHSLLPV_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3;REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.28631591796875	2	511.287474	1020.5604	0.28253	0.00014445	-1.1271	-0.00057627	-0.84457	-0.00043182	511.2867408773945	41.845	0.72731	41.919	41.584	42.312	0.073418					40	17	3	0	0	0	0.33718	1	2775	2775		62.107	3.3255	1	605380	+		60649	17350;22851	40509	40525	68712	68712					0.05093742960286818
VEQHSLLPV	9	Unmodified	_VEQHSLLPV_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3;REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	511.2876892089844	2	511.287474	1020.5604	0.062378	3.1893E-05	-1.1131	-0.00056911	-1.0507	-0.00053722	511.28662483602045	41.834	0.71769	41.788	41.434	42.152	-0.045467					37	17	3	0	0	0	0.28163	1	2772	2772		66.429	7.6473	1	644920	+		60650	17350;22851	40509	40525	68713	68713					0.05093742960286818
VEQHSLLPV	9	Unmodified	_VEQHSLLPV_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3;REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	511.287474	1020.5604	-0.43839	-0.00022414	-0.24891	-0.00012726	-0.68729	-0.0003514	511.2870812500734	41.969	0.73903	41.973	41.619	42.358	0.0043983	0.10724	0.00024201	NaN	120.62	43	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	753980	+		60651	17350;22851	40509	40525							0.05093742960286818
VEQHSLLPV	9	Unmodified	_VEQHSLLPV_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3;REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	511.287474	1020.5604	0.062378	3.1893E-05	-1.1131	-0.00056911	-1.0507	-0.00053722	511.28662483602045	41.834	0.71769	41.788	41.434	42.152	-0.045467	-0.077593	-0.00064168	NaN	120.62	37	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	644920	+		60652	17350;22851	40509	40525							0.05093742960286818
VEQHSLLPV	9	Unmodified	_VEQHSLLPV_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3;REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	511.287474	1020.5604	-2.1336	-0.0010909	-0.14725	-7.5289E-05	-2.2809	-0.0011662	511.28722162198466	41.289	0.31697	41.703	41.543	41.86	0.4139	-0.16269	0.00034596	NaN	120.62	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	520460	+		60653	17350;22851	40509	40525							0.05093742960286818
VEQHSLLPV	9	Unmodified	_VEQHSLLPV_					0	0	0			REV__ENSG00000102753|ENST00000261667|KPNA3;REV__ENSG00000186432|ENST00000334256|KPNA4	REV__ENSG00000186432|ENST00000334256|KPNA4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	511.287474	1020.5604	-1.0477	-0.0005357	-0.28199	-0.00014418	-1.3297	-0.00067987	511.28704163337414	41.189	0.31154	41.823	41.641	41.952	0.6339	-0.043014	0.00020818	NaN	120.62	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	426390	+		60654	17350;22851	40509	40525							0.05093742960286818
VERAHNAT	8	Unmodified	_VERAHNAT_					0	0	0		ENST00000360982.2_1_2:183903343-183903409:-|nuORF	ENST00000360982.2_1_2:183903343-183903409:-|nuORF	ENST00000360982.2_1_2:183903343-183903409:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	449.23321533203125	2	449.230491	896.446428	-1.2481	-0.0005607	1.5085	0.00067767	0.26038	0.00011697	449.23112787491493	83.63	3.2349	83.63	82.037	85.271	0					120	78	2	0	0	0	0.87922	1	7816	7816		31.955	2.1133	1	126580			60655	10462	40510	40526	68714	68714					-0.0059372708195724044
VERKLVTK	8	Unmodified	_VERKLVTK_					0	0	0			REV__ENST00000398505.7_1_21:43413696-43413789:-|nuORF	REV__ENST00000398505.7_1_21:43413696-43413789:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	486.8132629394531	2	486.813659	971.612765	-0.21818	-0.00010621	-0.20428	-9.9448E-05	-0.42247	-0.00020566	486.8134859363653	32.309	0.98692	32.435	32.073	33.06	0.12642					70	22	5	0	0	0	0.46912	1	2275	2275		77.318	10.356	1	4653700	+		60656	26208	40511	40527	68715	68715					0.12582326093900065
VERKLVTK	8	Unmodified	_VERKLVTK_					0	0	0			REV__ENST00000398505.7_1_21:43413696-43413789:-|nuORF	REV__ENST00000398505.7_1_21:43413696-43413789:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.8129577636719	2	486.813659	971.612765	0.56917	0.00027708	-0.99852	-0.00048609	-0.42935	-0.00020901	486.8131194278926	32.26	1.0233	32.367	32.016	33.04	0.10707					72	23	5	0	0	0	0.081896	1	2236	2236		122.18	9.7651	1	4982000	+		60657	26208	40511	40527	68716	68716					0.12582326093900065
VERLLAELPLV	11	Unmodified	_VERLLAELPLV_					0	0	0			REV__ENST00000492406.5_1_3:112281084-112282267:+|nuORF	REV__ENST00000492406.5_1_3:112281084-112282267:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3905029296875	2	626.387188	1250.75982	0.92654	0.00058037	-2.4067	-0.0015075	-1.4802	-0.00092716	626.3854005656832	109.98	1.1023	110.05	109.78	110.88	0.073685					78	37	4	0	0	0	0.75921	1	11785	11785		19.997	0	1	2583100	+		60658	27673	40512	40528	68717	68717					0.14447378188197035
VERRKERRLPQ	11	Unmodified	_VERRKERRLPQ_					0	0	0		ENSG00000125966|ENST00000246186|MMP24	ENSG00000125966|ENST00000246186|MMP24	ENSG00000125966|ENST00000246186|MMP24	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.9615478515625	3	489.626936	1465.85898	0.17066	8.3561E-05	1.3811	0.00067621	1.5517	0.00075977	489.6275270289365	16.998	0.34298	16.387	16.177	16.52	-0.6107					19	7	4	0	0	0	0.17729	1	199	199		12.957	0	1	133220			60659	3431	40513	40529	68718	68718					0.14468213925647433
VERRLRRVR	9	Unmodified	_VERRLRRVR_					0	0	0			REV__ENST00000266673.9_1_12:72079947-72080253:+|nuORF	REV__ENST00000266673.9_1_12:72079947-72080253:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.266357421875	3	413.933811	1238.7796	-1.0636	-0.00044025	4.4206	0.0018299	3.3571	0.0013896	413.935923910899	64.124	0.69815	64.154	63.946	64.644	0.030251					38	26	2	0	0	0	0.20789	1	5678	5678		7.0187	0	1	161390	+		60660	24504	40514	40530	68719	68719					0.1697661176215206
VERRLVAAS	9	Unmodified	_VERRLVAAS_					0	0	0			REV__ENST00000366756.3_1_6:170598871-170599358:-|nuORF	REV__ENST00000366756.3_1_6:170598871-170599358:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	500.79840087890625	2	500.79854	999.582528	-0.065162	-3.2633E-05	-1.6975	-0.00085009	-1.7626	-0.00088273	500.79757326318753	94.542	1.5024	94.611	94.008	95.511	0.068344					48	35	2	0	0	0	0.78983	1	9883	9883		27.882	1.1893	1	553460	+		60661	25535	40515	40531	68720	68720					0.08271967428697735
VERVVEGP	8	Unmodified	_VERVVEGP_					0	0	0		ENSG00000128335|ENST00000358502|APOL2	ENSG00000128335|ENST00000358502|APOL2	ENSG00000128335|ENST00000358502|APOL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7446594238281	2	442.745442	883.476331	-1.0712	-0.00047426	-0.44731	-0.00019804	-1.5185	-0.00067231	442.7451375740114	88.75	0.64149	89.22	88.876	89.518	0.47068					51	15	4	0	0	0	0.93786	1	10523	10523		53.351	1.0523	1	6813200			60662	3538	40516	40532	68721	68721					0.02993211863383749
VERWVHMERKV	11	Unmodified	_VERWVHMERKV_					0	0	0			REV__ENSG00000198576|ENST00000356613|ARC	REV__ENSG00000198576|ENST00000356613|ARC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.5819091796875	3	490.266239	1467.77689	-0.083198	-4.0789E-05	-3.2189	-0.0015781	-3.3021	-0.0016189	490.26456289160035	67.545	0.5965	67.561	67.351	67.947	0.016205					38	25	2	0	0	0	0.17365	1	6383	6383		15.921	10.508	1	139610	+		60663	23341	40517	40533	68722	68722					0.061709755223091634
VESLILKAF	9	Unmodified	_VESLILKAF_					0	0	0			REV__ENSG00000173200|ENST00000464300|PARP15	REV__ENSG00000173200|ENST00000464300|PARP15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.3122253417969	2	510.310418	1018.60628	1.4005	0.00071471	-4.2013	-0.002144	-2.8008	-0.0014293	510.3081063715219	23.193	0.46866	22.619	22.409	22.878	-0.57415					21	11	3	0	0	0	0.78536	1	1016	1016		29.15	0	1	91085	+		60664	21900	40518	40534	68723	68723					0.09772388142528143
VESLILKAF	9	Unmodified	_VESLILKAF_					0	0	0			REV__ENSG00000173200|ENST00000464300|PARP15	REV__ENSG00000173200|ENST00000464300|PARP15	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	510.310418	1018.60628	0.78655	0.00040138	-3.6212	-0.0018479	-2.8346	-0.0014465	510.3084518926666	23.227	0.58671	22.808	22.575	23.162	-0.41879	0.094937	0.00024622	NaN	29.15	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89246	+		60665	21900	40518	40534							0.09772388142528143
VESLILKAF	9	Unmodified	_VESLILKAF_					0	0	0			REV__ENSG00000173200|ENST00000464300|PARP15	REV__ENSG00000173200|ENST00000464300|PARP15	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	510.310418	1018.60628	1.4005	0.00071471	-4.2013	-0.002144	-2.8008	-0.0014293	510.3081063715219	23.193	0.46866	22.619	22.409	22.878	-0.57415	-0.094937	-0.00034587	NaN	29.15	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91085	+		60666	21900	40518	40534							0.09772388142528143
VESQIVSTSI	10	Unmodified	_VESQIVSTSI_					0	0	0			REV__nc|ENSG00000060237|Q9H4A3-5|WNK1	REV__nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.7877197265625	2	531.787504	1061.56045	-0.86406	-0.0004595	0.24182	0.00012859	-0.62225	-0.0003309	531.7874528636692	42.882	0.74136	43.315	43.047	43.788	0.4334					42	17	4	0	0	0	0.5442	1	3875	3875		53.089	5.4316	1	3354300	+		60667	29696	40519	40535	68724	68724					0.03213698169633972
VESTPIPDTPR	11	Unmodified	_VESTPIPDTPR_					0	0	0			REV__nc|ENSG00000107862|Q92538-3|GBF1	REV__nc|ENSG00000107862|Q92538-3|GBF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.5484619140625	3	404.547065	1210.61937	-0.35301	-0.00014281	0.9575	0.00038736	0.60449	0.00024455	404.54741587561455	27.836	0.65628	27.798	27.553	28.209	-0.038525					23	14	2	0	0	0	0.73277	1	1371	1371		25.892	8.725	1	44202	+		60668	17679	40520	40536	68725	68725					0.02248174463943542
VESTPIPDTPR	11	Unmodified	_VESTPIPDTPR_					0	0	0			REV__nc|ENSG00000107862|Q92538-3|GBF1	REV__nc|ENSG00000107862|Q92538-3|GBF1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	404.547065	1210.61937	2.7647	0.0011184	-2.3857	-0.00096514	0.37894	0.0001533	404.5459732463336	28.095	0.54025	28.072	27.768	28.308	-0.023556	0.13694	-0.0015297	NaN	25.892	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48975	+		60669	17679	40520	40536							0.02248174463943542
VESVDHDSCV	10	Unmodified	_VESVDHDSCV_					0	0	0		nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4;ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-2|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.3167114257812	2	545.229496	1088.44444	0.75158	0.00040978	-1.9497	-0.001063	-1.1981	-0.00065326	545.2285160685033	90.246	0.21069	90.4	90.302	90.513	0.15388					5	4	2	0	0	0	0.37624	1	9049	9049		19.997	3.5236	1	41954			60670	8020	40521	40537	68726	68726					-0.09624568672734313
VETAIKVL	8	Unmodified	_VETAIKVL_					0	0	0		nc|ENSG00000160695|Q9H270|VPS11;ENSG00000160695|ENST00000621676|VPS11;ENST00000534551.2_1_11:118947733-118948890:+|nuORF	nc|ENSG00000160695|Q9H270|VPS11	nc|ENSG00000160695|Q9H270|VPS11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.77484130859375	2	436.776211	871.537869	0.64809	0.00028307	-3.7904	-0.0016555	-3.1423	-0.0013725	436.77446931538566	90.701	2.4445	90.855	90.26	92.704	0.15388					187	58	4	0	0	0	0.90465	1	9244	9244		40.573	5.3719	1	11761000			60671	5598	40522	40538	68727	68727					0.09696143562666748
VETAQGQRFL	10	Unmodified	_VETAQGQRFL_					0	0	0		ENST00000526449.1_1_11:65767491-65767878:-|nuORF;ENSG00000175376|ENST00000533544|EIF1AD	ENST00000526449.1_1_11:65767491-65767878:-|nuORF	ENST00000526449.1_1_11:65767491-65767878:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.3126220703125	2	574.806562	1147.59857	0.48446	0.00027847	-0.40177	-0.00023094	0.082685	4.7528E-05	574.8061834619125	33.892	0.55391	33.938	33.653	34.207	0.045853					44	25	2	0	0	0	0.8608	1	1690	1690		34.173	5.023	1	186370			60672	7013	40523	40539	68728	68728					0.03067628874964612
VETEWLANVL	10	Unmodified	_VETEWLANVL_					0	0	0			REV__nc|ENSG00000184381|O60733-2|PLA2G6	REV__nc|ENSG00000184381|O60733-2|PLA2G6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.3093872070312	2	587.311146	1172.60774	-1.045	-0.00061371	-2.2864	-0.0013428	-3.3314	-0.0019566	587.3097736269917	46.939	0.85826	47.862	47.607	48.466	0.92315					46	20	4	0	0	0	0.062066	2	4459	4459;4472		107.01	2.584	1	4776800	+		60673	22671	40524	40540	68729;68730	68729					0.0283397744060494
VETLVDALEA	10	Unmodified	_VETLVDALEA_					0	0	0			REV__nc|ENSG00000132141|Q92526-2|CCT6B	REV__nc|ENSG00000132141|Q92526-2|CCT6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2813110351562	2	530.282054	1058.54956	0.61239	0.00032474	-0.74714	-0.00039619	-0.13475	-7.1454E-05	530.2815994121593	76.378	0.57333	76.511	76.205	76.779	0.13325					30	18	2	0	0	0	0.8608	1	7140	7140		34.173	0	1	112310	+		60674	18983	40525	40541	68731	68731					0.022622957953217337
VETPTGYIESL	11	Unmodified	_VETPTGYIESL_					0	0	0		nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000187109|P55209-2|NAP1L1;ENSG00000187109|ENST00000618691|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8055419921875	2	604.805894	1207.59723	0.49614	0.00030007	-0.3956	-0.00023926	0.10054	6.081E-05	604.805557549707	79	0.59437	79.411	79.142	79.736	0.4106					41	13	4	0	0	0	0.33509	2	9048	9036;9048		65.465	10.27	1	757880			60675	7841	40526	40542	68732;68733	68733					0.0017394999551925139
VETTVYEPSP	10	Unmodified	_VETTVYEPSP_					0	0	0			REV__ENSG00000094975|ENST00000263688|SUCO	REV__ENSG00000094975|ENST00000263688|SUCO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.2779541015625	2	561.271687	1120.52882	1.6989	0.00095355	-0.40244	-0.00022588	1.2965	0.00072767	561.2716552387016	91.555	0.55309	92.004	91.672	92.225	0.44959					19	12	2	0	0	0	0.37624	1	10878	10878		19.997	0	1	222220	+		60676	17049	40527	40543	68734	68734					-0.026622945843200796
VEVANLACSM	10	Oxidation (M)	_VEVANLACSM(Oxidation (M))_		VEVANLACSM(1)		VEVANLACSM(55)	0	0	1		nc|ENSG00000183230|Q9UI47-2|CTNNA3;ENSG00000183230|ENST00000433211|CTNNA3	nc|ENSG00000183230|Q9UI47-2|CTNNA3	nc|ENSG00000183230|Q9UI47-2|CTNNA3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7421264648438	2	526.741185	1051.46782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.392	1	75.956	75.456	76.456	0.56458								0	0	0	0.45132	1	8558	8558		54.776	8.8041	1				60677	7510	40528	40544	68735	68735		131			-0.05585846159783614
VEVELIPE	8	Unmodified	_VEVELIPE_					0	0	0			REV__nc|ENSG00000114867|Q04637-3|EIF4G1	REV__nc|ENSG00000114867|Q04637-3|EIF4G1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2535400390625	2	464.255308	926.496064	0.5946	0.00027605	-3.5731	-0.0016588	-2.9785	-0.0013828	464.25355465849185	81.523	3.0273	81.667	79.894	82.921	0.14352					163	84	3	0	0	0	0.884	1	7736	7736		33.516	1.5607	1	434730	+		60678	18072	40529	40545	68736	68736					0.02987543083474975
VEVEWYHRESM	11	Unmodified	_VEVEWYHRESM_					0	0	0			REV__ENST00000508906.6_3_6:26376811-26377501:+|nuORF	REV__ENST00000508906.6_3_6:26376811-26377501:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.7876892089844	3	488.890726	1463.65035	0.85702	0.00041899	2.5307	0.0012372	3.3877	0.0016562	488.8917204566152	33.236	0.21083	33.448	33.313	33.524	0.21168					7	4	2	0	0	0	0.17882	1	2395	2395		11.455	0	1	117730	+		60679	27935	40530	40546	68737	68737					-0.06292995493458875
VEVGPEPAEL	10	Unmodified	_VEVGPEPAEL_					0	0	0			REV__ENSG00000162434|ENST00000342505|JAK1	REV__ENSG00000162434|ENST00000342505|JAK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.2704467773438	2	520.268947	1038.52334	0.84711	0.00044072	-0.80082	-0.00041664	0.046285	2.4081E-05	520.2683733158087	53.921	0.54391	54.334	54.036	54.58	0.4139					22	12	2	0	0	0	0.37206	2	5479	5479;5486		66.429	16.988	1	1010700	+		60680	20815	40531	40547	68738;68739	68738					0.005620266238793192
VEVIDGVVL	9	Unmodified	_VEVIDGVVL_					0	0	0			REV__ENSG00000075673|ENST00000381946|ATP12A	REV__ENSG00000075673|ENST00000381946|ATP12A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7793884277344	2	471.778951	941.543348	-0.65012	-0.00030671	0.67197	0.00031702	0.021851	1.0309E-05	471.77898452212014	81.892	1.4081	82.392	81.953	83.361	0.49967					75	34	4	0	0	0	0.43338	1	9511	9511		55.504	0	1	2439200	+		60681	16716	40532	40548	68740	68740					0.070238223544834
VEVNPFGETP	10	Unmodified	_VEVNPFGETP_					0	0	0		ENST00000307241.5_1_12:94942028-94943309:+|nuORF;ENSG00000172340|ENST00000307227|SUCLG2;nc|ENSG00000172340|Q96I99-2|SUCLG2	ENST00000307241.5_1_12:94942028-94943309:+|nuORF	ENST00000307241.5_1_12:94942028-94943309:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.7946166992188	2	544.766571	1087.51859	-0.25331	-0.00013799	2.907	0.0015836	2.6537	0.0014456	544.7680755518336	66.263	0.41154	66.813	66.447	66.859	0.55071					17	10	2	0	0	0	0.37624	1	7219	7219		25.574	9.1009	1	366470			60682	6763	40533	40549	68741	68741					-0.021668575189096373
VEVTLPELI	9	Unmodified	_VEVTLPELI_					0	0	0			REV__ENSG00000166106|ENST00000299164|ADAMTS15	REV__ENSG00000166106|ENST00000299164|ADAMTS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.80029296875	2	506.799883	1011.58521	-0.49395	-0.00025034	3.2876	0.0016661	2.7936	0.0014158	506.80151845061806	48.096	1.8847	48.118	47.669	49.554	0.02227					69	50	2	0	0	0	0.77546	1	3641	3641		31.955	7.7521	1	219330	+		60683	21250	40534	40550	68742	68742					0.07988378043000921
VEVTLPELI	9	Unmodified	_VEVTLPELI_					0	0	0			REV__ENSG00000166106|ENST00000299164|ADAMTS15	REV__ENSG00000166106|ENST00000299164|ADAMTS15	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8014831542969	2	506.799883	1011.58521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.226	1	48.263	47.763	48.763	0.037731								0	0	0	0.32159	1	3661	3661		23.042	0	1		+		60684	21250	40534	40550	68743	68743					0.07988378043000921
VEVVLRVVQP	10	Unmodified	_VEVVLRVVQP_					0	0	0		ENST00000527191.1_1_11:6625447-6625588:-|nuORF	ENST00000527191.1_1_11:6625447-6625588:-|nuORF	ENST00000527191.1_1_11:6625447-6625588:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8541870117188	2	569.353148	1136.69174	-0.35302	-0.00020099	4.3823	0.0024951	4.0293	0.0022941	569.355516017385	107.55	0.91276	107.55	106.89	107.8	0					33	21	2	0	0	0	0.37624	1	11123	11123		19.104	0	1	220440			60685	13275	40535	40551	68744	68744					0.12886553328166883
VFAGMYPL	8	Unmodified	_VFAGMYPL_					0	0	0		ENST00000506793.5_1_4:44680541-44700695:+|nuORF;ENSG00000151806|ENST00000281543|GUF1	ENST00000506793.5_1_4:44680541-44700695:+|nuORF	ENST00000506793.5_1_4:44680541-44700695:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.23248291015625	2	449.230582	896.446611	-1.2863	-0.00057784	1.2985	0.00058334	0.012238	5.4976E-06	449.2311264032564	83.242	4.4752	83.407	81.466	85.941	0.1651					199	104	3	0	0	0	0.88393	1	8019	8019		33.493	1.5381	1	231800			60686	5144	40536	40552	68745	68745					-0.005754434063192093
VFAGRVAR	8	Unmodified	_VFAGRVAR_					0	0	0			REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.26336669921875	2	438.264136	874.51372	-0.013576	-5.9498E-06	-1.6103	-0.00070574	-1.6239	-0.00071169	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.884	1	2391	2391		33.516	3.0119	1	3673500	+		60687	27034	40537	40553	68746	68746					0.07144347919643224
VFAGRVAR	8	Unmodified	_VFAGRVAR_					0	0	0			REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2630615234375	2	438.264136	874.51372	-1.2142	-0.00053214	-0.86056	-0.00037715	-2.0748	-0.00090929	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.90465	1	3170	3170		40.573	0	1	4828000	+		60688	27034	40537	40553	68747	68747					0.07144347919643224
VFAGRVAR	8	Unmodified	_VFAGRVAR_					0	0	0			REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.26336669921875	2	438.264136	874.51372	-1.5833	-0.00069392	-0.15448	-6.7702E-05	-1.7378	-0.00076162	438.2641454115844	35.45	4.3774	35.481	35.142	39.519	0.031132					333	127	5	0	0	0	0.884	1	1966	1966		33.516	3.0119	1	11160000	+		60689	27034	40537	40553	68748	68748					0.07144347919643224
VFAGRVAR	8	Unmodified	_VFAGRVAR_					0	0	0			REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26336669921875	2	438.264136	874.51372	0.037237	1.632E-05	-1.83	-0.00080201	-1.7927	-0.00078569	438.26341686863736	35.479	4.0118	35.419	35.141	39.153	-0.060337					317	121	5	0	0	0	0.87922	1	1930	1930		31.955	0	1	10667000	+		60690	27034	40537	40553	68749	68749					0.07144347919643224
VFAGRVAR	8	Unmodified	_VFAGRVAR_					0	0	0			REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.26275634765625	2	438.264136	874.51372	-2.4769	-0.0010856	-1.2978	-0.00056879	-3.7748	-0.0016543	438.2637646231853	40.779	5.6179	41.172	40.76	46.378	0.39209					339	143	5	0	0	0	0.90465	1	3589	3589		40.573	4.9543	1	246320000	+		60691	27034	40537	40553	68750	68750					0.07144347919643224
VFAGRVAR	8	Unmodified	_VFAGRVAR_					0	0	0			REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2613220214844	2	438.264136	874.51372	-1.2747	-0.00055866	-2.1943	-0.00096169	-3.469	-0.0015203	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.884	3	3601	3577;3601;3650		40.573	4.9543	1	219150000	+		60692	27034	40537	40553	68751;68752;68753	68752					0.07144347919643224
VFALTNSKKPK	11	Unmodified	_VFALTNSKKPK_					0	0	0		ENSG00000168329|ENST00000399220|CX3CR1;nc|ENSG00000168329|P49238-3|CX3CR1;nc|ENSG00000168329|P49238-4|CX3CR1;nc|ENSG00000168329|P49238-2|CX3CR1	ENSG00000168329|ENST00000399220|CX3CR1	ENSG00000168329|ENST00000399220|CX3CR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.58392333984375	3	411.583562	1231.72886	1.0715	0.00044102	0.55464	0.00022828	1.6262	0.0006693	411.58372332792885	25.568	2.1598	25.311	24.774	26.934	-0.25721					112	48	3	0	0	0	0.73647	1	1362	1362		25.068	3.2874	1	1250200			60693	6393	40538	40554	68754	68754					0.1222622487391618
VFAPVICKRT	10	Unmodified	_VFAPVICKRT_					0	0	0		nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3	nc|ENSG00000168056|Q9NS15-2|LTBP3	nc|ENSG00000168056|Q9NS15-2|LTBP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3297119140625	2	567.328619	1132.64269	1.3743	0.0007797	1.0283	0.00058341	2.4027	0.0013631	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.8651	1	11257	11257		25.574	2.9944	1	6182600			60694	6363	40539	40555	68755	68755					0.08166941767558455
VFAQGQHF	8	Unmodified	_VFAQGQHF_					0	0	0			REV__ENSG00000205835|ENST00000442080|GMNC	REV__ENSG00000205835|ENST00000442080|GMNC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	467.23248291015625	2	467.232502	932.450451	-0.11748	-5.4892E-05	1.2185	0.00056934	1.1011	0.00051445	467.2327428056879	71.137	0.72312	71.171	70.806	71.53	0.034004					44	35	2	0	0	0	0.88915	1	6696	6696		35.201	6.9464	1	113500	+		60695	23579	40540	40556	68756	68756					-0.018476375882301
VFAQGQHF	8	Unmodified	_VFAQGQHF_					0	0	0			REV__ENSG00000205835|ENST00000442080|GMNC	REV__ENSG00000205835|ENST00000442080|GMNC	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	467.232502	932.450451	-0.11748	-5.4892E-05	1.2185	0.00056934	1.1011	0.00051445	467.2327428056879	71.137	0.72312	71.171	70.806	71.53	0.034004	0.10643	-0.0010615	NaN	35.201	44	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113500	+		60696	23579	40540	40556							-0.018476375882301
VFAQGQHF	8	Unmodified	_VFAQGQHF_					0	0	0			REV__ENSG00000205835|ENST00000442080|GMNC	REV__ENSG00000205835|ENST00000442080|GMNC	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	467.232502	932.450451	-0.88272	-0.00041244	1.6535	0.00077259	0.77082	0.00036015	467.23290620756603	70.924	0.2672	70.962	70.873	71.14	0.038055	-0.10258	-0.00065501	NaN	35.201	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149270	+		60697	23579	40540	40556							-0.018476375882301
VFAQGQHF	8	Unmodified	_VFAQGQHF_					0	0	0			REV__ENSG00000205835|ENST00000442080|GMNC	REV__ENSG00000205835|ENST00000442080|GMNC	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	467.232502	932.450451	-1.1088	-0.00051806	2.5625	0.0011973	1.4537	0.0006792	467.23347344567276	70.726	0.34748	70.802	70.628	70.975	0.076225	-0.26256	0.00019434	NaN	35.201	19	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191520	+		60698	23579	40540	40556							-0.018476375882301
VFAQGQHF	8	Unmodified	_VFAQGQHF_					0	0	0			REV__ENSG00000205835|ENST00000442080|GMNC	REV__ENSG00000205835|ENST00000442080|GMNC	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	467.232502	932.450451	-1.0133	-0.00047343	2.8927	0.0013516	1.8794	0.00087814	467.23374227659957	70.939	1.9167	71.324	70.957	72.874	0.38449	0.2587	0.00050294	NaN	35.201	67	45	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149970	+		60699	23579	40540	40556							-0.018476375882301
VFAQLFAIP	9	Unmodified	_VFAQLFAIP_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2;ENST00000484041.5_1_1:233225805-233270923:-|nuORF;ENST00000486012.5_1_1:233231420-233297095:-|nuORF	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	503.7932434082031	2	503.292028	1004.5695	-1.6043	-0.00080741	0.58655	0.00029521	-1.0177	-0.0005122	503.29217405547223	109.68	1.349	109.69	109.36	110.71	0.0060425					102	50	3	0	0	0	0.76996	1	11701	11701		33.516	0	1	1381900			60700	4049	40541	40557	68757	68757					0.06740136316614098
VFAVHKPKG	9	Unmodified	_VFAVHKPKG_					0	0	0		ENST00000485065.1_1_10:116698192-116719580:+|nuORF;ENSG00000165832|ENST00000298746|TRUB1	ENST00000485065.1_1_10:116698192-116719580:+|nuORF	ENST00000485065.1_1_10:116698192-116719580:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7953186035156	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.7932	1	4570	4570		18.324	0	1	1898900			60701	6131	40542	40558	68758	68758					0.08446074267999393
VFDEAIRAV	9	Unmodified	_VFDEAIRAV_					0	0	0		ENST00000419413.1_1_X:136523419-136523611:-|nuORF;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;ENSG00000169750|ENST00000306897|RAC3;ENSG00000136238|ENST00000348035|RAC1;ENSG00000128340|ENST00000249071|RAC2;nc|ENSG00000136238|P63000-2|RAC1	ENST00000419413.1_1_X:136523419-136523611:-|nuORF	ENST00000419413.1_1_X:136523419-136523611:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.2812194824219	2	510.279649	1018.54475	-0.052059	-2.6565E-05	-0.034473	-1.7591E-05	-0.086532	-4.4156E-05	510.2794957517753	56.249	1.0169	56.646	56.355	57.371	0.39672					59	25	3	0	0	0	0.034797	5	5783	5783;5792;5803;5815;5830		115.49	33.189	1	3336600			60702	3539	40543	40559	68759;68760;68761;68762;68763	68759					0.03621456443227089
VFDEAIRAV	9	Unmodified	_VFDEAIRAV_					0	0	0		ENST00000419413.1_1_X:136523419-136523611:-|nuORF;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;ENSG00000169750|ENST00000306897|RAC3;ENSG00000136238|ENST00000348035|RAC1;ENSG00000128340|ENST00000249071|RAC2;nc|ENSG00000136238|P63000-2|RAC1	ENST00000419413.1_1_X:136523419-136523611:-|nuORF	ENST00000419413.1_1_X:136523419-136523611:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2797546386719	2	510.279649	1018.54475	1.0284	0.00052475	-1.0093	-0.00051502	0.019071	9.7314E-06	510.2789885805911	56.133	0.70097	56.693	56.395	57.096	0.55954					45	17	3	0	0	0	0.0030376	4	5796	5785;5796;5808;5834		139.97	40.596	1	3742000			60703	3539	40543	40559	68764;68765;68766;68767	68765					0.03621456443227089
VFDEAVRV	8	Unmodified	_VFDEAVRV_					0	0	0		ENST00000475867.5_1_10:5963439-5965826:+|nuORF;ENSG00000134452|ENST00000362091|FBH1;nc|ENSG00000134452|Q8NFZ0-2|FBH1	ENST00000475867.5_1_10:5963439-5965826:+|nuORF	ENST00000475867.5_1_10:5963439-5965826:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.7531433105469	2	467.753267	933.491981	-0.11347	-5.3078E-05	-0.31979	-0.00014958	-0.43327	-0.00020266	467.75315992982456	49.88	0.57989	50.327	50.061	50.641	0.44761					22	13	2	0	0	0	0.36517	1	4886	4886		82.241	21.269	1	620670			60704	3936	40544	40560	68768	68768					0.022574983804247495
VFDEAVRV	8	Unmodified	_VFDEAVRV_					0	0	0		ENST00000475867.5_1_10:5963439-5965826:+|nuORF;ENSG00000134452|ENST00000362091|FBH1;nc|ENSG00000134452|Q8NFZ0-2|FBH1	ENST00000475867.5_1_10:5963439-5965826:+|nuORF	ENST00000475867.5_1_10:5963439-5965826:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7531433105469	2	467.753267	933.491981	0.27076	0.00012665	-0.55472	-0.00025947	-0.28396	-0.00013282	467.75300573127737	49.706	0.58041	50.551	50.354	50.934	0.84501					20	13	2	0	0	0	0.36305	1	4876	4876		84.916	13.62	1	452850			60705	3936	40544	40560	68769	68769					0.022574983804247495
VFDEFKPL	8	Unmodified	_VFDEFKPL_					0	0	0		nc|ENSG00000163631|P02768-3|ALB;nc|ENSG00000163631|P02768-2|ALB;ENSG00000163631|ENST00000295897|ALB;CON__P02768-1	nc|ENSG00000163631|P02768-3|ALB	nc|ENSG00000163631|P02768-3|ALB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.76611328125	2	497.765843	993.517133	-0.34601	-0.00017223	2.3596	0.0011745	2.0136	0.0010023	497.7661047678955	65.904	0.67049	66.29	66.028	66.698	0.38582					46	16	4	0	0	0	0.9283	2	7165	7153;7165		53.351	5.4358	1	383930		+	60706	584	40545	40561	68770;68771	68771					0.020115531830015243
VFDKDLDKDDF	11	Unmodified	_VFDKDLDKDDF_					0	0	0		ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1;ENST00000547667.5_1_12:56531318-56532071:+|nuORF	ENSG00000139641|ENST00000394048|ESYT1	ENSG00000139641|ENST00000394048|ESYT1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.88092041015625	3	452.882114	1355.62451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.262	1	18.262	17.762	18.762	0								0	0	0	0.56276	1	287	287		30.569	4.6771	1				60707	4386	40546	40562	68772	68772					-0.039075664640904506
VFDKTLAEL	9	Unmodified	_VFDKTLAEL_					0	0	0		nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;ENSG00000171681|ENST00000261168|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;ENST00000539659.5_1_12:14576849-14613468:+|nuORF;ENST00000541654.1_1_12:14538317-14613468:+|nuORF	nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.2899169921875	2	518.289682	1034.56481	-0.38583	-0.00019997	0.077426	4.0129E-05	-0.3084	-0.00015984	518.2896133085445	61.632	2.1558	62.02	61.592	63.748	0.38845					108	49	4	0	0	0	0.0041213	6	6572	6550;6560;6572;6584;6596;6611		138.06	47.286	1	2235300			60708	6696	40547	40563	68773;68774;68775;68776;68777;68778	68775					0.04891207383184337
VFDKTLAEL	9	Unmodified	_VFDKTLAEL_					0	0	0		nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;ENSG00000171681|ENST00000261168|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;ENST00000539659.5_1_12:14576849-14613468:+|nuORF;ENST00000541654.1_1_12:14538317-14613468:+|nuORF	nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	nc|ENSG00000171681|Q6VMQ6-5|ATF7IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.2892456054688	2	518.289682	1034.56481	-0.22396	-0.00011607	-0.1179	-6.1104E-05	-0.34185	-0.00017718	518.2895027267034	61.473	1.7258	62.027	61.655	63.381	0.55386					97	40	4	0	0	0	0.014602	6	6570	6549;6559;6570;6579;6591;6603		129.42	38.645	1	2195700			60709	6696	40547	40563	68779;68780;68781;68782;68783;68784	68781					0.04891207383184337
VFDTAIAHL	9	Unmodified	_VFDTAIAHL_					0	0	0		ENSG00000181788|ENST00000312960|SIAH2	ENSG00000181788|ENST00000312960|SIAH2	ENSG00000181788|ENST00000312960|SIAH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.7691345214844	2	493.768917	985.523281	-0.89273	-0.0004408	0.74839	0.00036953	-0.14434	-7.127E-05	493.76912043453274	63.876	0.98788	64.263	63.919	64.907	0.3868					53	22	3	0	0	0	2.4455E-08	4	6898	6873;6885;6898;6911		157.99	81.215	1	692150			60710	7404	40548	40564	68785;68786;68787;68788	68787					0.029940714145027414
VFDTAIAHL	9	Unmodified	_VFDTAIAHL_					0	0	0		ENSG00000181788|ENST00000312960|SIAH2	ENSG00000181788|ENST00000312960|SIAH2	ENSG00000181788|ENST00000312960|SIAH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7683410644531	2	493.768917	985.523281	0.0050902	2.5134E-06	-0.10972	-5.4177E-05	-0.10463	-5.1663E-05	493.76870620630535	63.754	0.97874	64.309	63.961	64.939	0.55449					50	22	3	0	0	0	2.4455E-08	4	6883	6883;6893;6905;6920		157.99	78.05	1	704080			60711	7404	40548	40564	68789;68790;68791;68792	68789					0.029940714145027414
VFDTAIAHLF	10	Unmodified	_VFDTAIAHLF_					0	0	0		ENSG00000181788|ENST00000312960|SIAH2	ENSG00000181788|ENST00000312960|SIAH2	ENSG00000181788|ENST00000312960|SIAH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3026123046875	2	567.303124	1132.5917	-0.28537	-0.00016189	0.36117	0.00020489	0.075801	4.3002E-05	567.3032536924816	83.53	0.8428	83.964	83.579	84.422	0.43376					45	19	3	0	0	0	1.6280000000000002E-56	3	9687	9687;9699;9711		211.23	128.93	1	965930			60712	7404	40549	40565	68793;68794;68795	68793					0.030703159943413993
VFDTAIAHLF	10	Unmodified	_VFDTAIAHLF_					0	0	0		ENSG00000181788|ENST00000312960|SIAH2	ENSG00000181788|ENST00000312960|SIAH2	ENSG00000181788|ENST00000312960|SIAH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3018798828125	2	567.303124	1132.5917	0.88637	0.00050284	-0.84098	-0.00047709	0.045395	2.5753E-05	567.3025781480351	83.54	1.1959	83.995	83.684	84.879	0.45556					62	28	4	0	0	0	5.5763E-24	3	9722	9722;9732;9745		177.71	103.73	1	1014100			60713	7404	40549	40565	68796;68797;68798	68796					0.030703159943413993
VFDTSIAQL	9	Unmodified	_VFDTSIAQL_					0	0	0		nc|ENSG00000196470|Q8IUQ4-2|SIAH1;ENSG00000196470|ENST00000394725|SIAH1	nc|ENSG00000196470|Q8IUQ4-2|SIAH1	nc|ENSG00000196470|Q8IUQ4-2|SIAH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.2649230957031	2	497.266207	992.517862	-0.33017	-0.00016418	0.4246	0.00021114	0.094423	4.6953E-05	497.2662820538503	77.499	1.2076	77.904	77.547	78.754	0.4053					52	28	3	0	0	0	0.11055	2	8824	8813;8824		90.37	5.7379	1	842780			60714	8062	40550	40566	68799;68800	68800					0.021303478320305658
VFDTSIAQL	9	Unmodified	_VFDTSIAQL_					0	0	0		nc|ENSG00000196470|Q8IUQ4-2|SIAH1;ENSG00000196470|ENST00000394725|SIAH1	nc|ENSG00000196470|Q8IUQ4-2|SIAH1	nc|ENSG00000196470|Q8IUQ4-2|SIAH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.2658996582031	2	497.266207	992.517862	-0.29277	-0.00014559	0.29497	0.00014668	0.0021975	1.0927E-06	497.2662054510893	77.412	0.75926	77.981	77.661	78.421	0.56836					47	17	3	0	0	0	0.057432	2	8844	8833;8844		104.75	10.919	1	975420			60715	8062	40550	40566	68801;68802	68802					0.021303478320305658
VFDWIEANL	9	Unmodified	_VFDWIEANL_					0	0	0		ENST00000478291.1_1_3:184049262-184049734:+|nuORF;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;ENST00000460829.5_1_3:184046782-184052693:+|nuORF	ENST00000478291.1_1_3:184049262-184049734:+|nuORF;ENST00000442406.5_1_3:184038690-184052693:+|nuORF	ENST00000442406.5_1_3:184038690-184052693:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.7794799804688	2	553.779482	1105.54441	1.2648	0.00070041	-1.1889	-0.00065839	0.075881	4.2022E-05	553.7787332447268	98.338	1.0133	98.707	98.325	99.338	0.36939					79	24	6	0	0	0	2.8862E-29	5	11826	11826;11837;11850;11861;11876		191.63	55.358	1	2780700			60716	2796;12384	40551	40567	68803;68804;68805;68806;68807	68803					-0.004139632766509749
VFDWIEANL	9	Unmodified	_VFDWIEANL_					0	0	0		ENST00000478291.1_1_3:184049262-184049734:+|nuORF;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;ENST00000460829.5_1_3:184046782-184052693:+|nuORF	ENST00000478291.1_1_3:184049262-184049734:+|nuORF;ENST00000442406.5_1_3:184038690-184052693:+|nuORF	ENST00000442406.5_1_3:184038690-184052693:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.7794189453125	2	553.779482	1105.54441	1.3874	0.00076829	-1.3716	-0.00075955	0.015782	8.7398E-06	553.7786477492558	98.416	0.97578	98.793	98.408	99.384	0.37679					69	23	6	0	0	0	2.7574E-05	5	11899	11878;11887;11899;11913;11925		153.04	50.262	1	3007200			60717	2796;12384	40551	40567	68808;68809;68810;68811;68812	68810					-0.004139632766509749
VFELEGVELGA	11	Unmodified	_VFELEGVELGA_					0	0	0		ENSG00000149679|ENST00000279101|CABLES2	ENSG00000149679|ENST00000279101|CABLES2	ENSG00000149679|ENST00000279101|CABLES2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	581.5942993164062	2	581.803154	1161.59175	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.353	1	64.352	63.852	64.852	-0.00078583								0	0	0	0.56276	1	6009	6009		40.778	9.2484	1				60718	5046	40552	40568	68813	68813					0.017422712037159727
VFELEGVELGA	11	Unmodified	_VFELEGVELGA_					0	0	0		ENSG00000149679|ENST00000279101|CABLES2	ENSG00000149679|ENST00000279101|CABLES2	ENSG00000149679|ENST00000279101|CABLES2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	581.8034057617188	2	581.803154	1161.59175	0.11403	6.6344E-05	0.88152	0.00051287	0.99555	0.00057922	581.8035838058198	64.735	1.1415	64.7	64.269	65.41	-0.034798					108	38	4	0	0	0	0.33869	1	6160	6160		64.207	2.0999	1	2150000			60719	5046	40552	40568	68814	68814					0.017422712037159727
VFELLAAL	8	Unmodified	_VFELLAAL_					0	0	0		nc|ENSG00000203485|Q27J81-3|INF2;nc|ENSG00000203485|Q27J81-2|INF2;ENSG00000203485|ENST00000392634|INF2	nc|ENSG00000203485|Q27J81-3|INF2	nc|ENSG00000203485|Q27J81-3|INF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2649230957031	2	438.265479	874.516405	-1.8646	-0.00081717	-3.5126	-0.0015394	-5.3771	-0.0023566	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.82464	1	3219	3219		21.702	1.2205	1	3384400			60720	8386	40553	40569	68815	68815					0.07412758533939723
VFELLAAL	8	Unmodified	_VFELLAAL_					0	0	0		nc|ENSG00000203485|Q27J81-3|INF2;nc|ENSG00000203485|Q27J81-2|INF2;ENSG00000203485|ENST00000392634|INF2	nc|ENSG00000203485|Q27J81-3|INF2	nc|ENSG00000203485|Q27J81-3|INF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26312255859375	2	438.265479	874.516405	-1.2142	-0.00053214	-3.9242	-0.0017198	-5.1384	-0.002252	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.83466	1	3455	3455		23.037	2.5549	1	4828000			60721	8386	40553	40569	68816	68816					0.07412758533939723
VFENILIDP	9	Unmodified	_VFENILIDP_					0	0	0			REV__nc|ENSG00000166736|P46098-3|HTR3A	REV__nc|ENSG00000166736|P46098-3|HTR3A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8103637695312	2	530.289682	1058.56481	2.2443	0.0011901	3.6487	0.0019348	5.8929	0.003125	530.2912312150793	102.47	0.2556	102.74	102.56	102.82	0.26322					10	5	3	0	0	0	0.20789	1	12424	12424		30.318	0	1	73852	+		60722	21312	40554	40570	68817	68817					0.037872073831977104
VFFFQRLPSRL	11	Unmodified	_VFFFQRLPSRL_					0	0	0			REV__ENST00000393357.6_1_1:114301402-114301543:-|nuORF	REV__ENST00000393357.6_1_1:114301402-114301543:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.6069641113281	3	470.60659	1408.79794	-0.32405	-0.0001525	0.00021661	1.0194E-07	-0.32383	-0.0001524	470.6063856598867	15.886	0.18743	15.806	15.726	15.913	-0.080017					19	8	3	0	0	0	0.73621	1	68	68		25.126	0	1	84087	+		60723	26055	40555	40571	68818	68818					0.1098930889352232
VFFFQRLPSRL	11	Unmodified	_VFFFQRLPSRL_					0	0	0			REV__ENST00000393357.6_1_1:114301402-114301543:-|nuORF	REV__ENST00000393357.6_1_1:114301402-114301543:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.6058654785156	3	470.60659	1408.79794	-0.13472	-6.3401E-05	-0.73132	-0.00034416	-0.86604	-0.00040756	470.6061921310363	15.814	0.17548	15.73	15.669	15.844	-0.083363					14	7	3	0	0	0	0.76251	1	82	82		19.263	0.73163	1	71714	+		60724	26055	40555	40571	68819	68819					0.1098930889352232
VFFFQRLPSRL	11	Unmodified	_VFFFQRLPSRL_					0	0	0			REV__ENST00000393357.6_1_1:114301402-114301543:-|nuORF	REV__ENST00000393357.6_1_1:114301402-114301543:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	470.60659	1408.79794	-0.13472	-6.3401E-05	-0.73132	-0.00034416	-0.86604	-0.00040756	470.6061921310363	15.814	0.17548	15.73	15.669	15.844	-0.083363	-0.037781	-0.00032428	NaN	25.126	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71714	+		60725	26055	40555	40571							0.1098930889352232
VFFILKNKVM	10	Unmodified	_VFFILKNKVM_					0	0	0		nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.381103515625	2	619.87012	1237.72569	2.1939	0.00136	-3.4327	-0.0021278	-1.2387	-0.00076786	619.8678481120112	105.55	0.81585	105.71	105.43	106.25	0.15584					50	22	3	0	0	0	0.37624	1	12934	12934		15.642	2.1878	1	181620			60726	15084	40556	40572	68820	68820					0.11633258495589871
VFFILKNKVM	10	Unmodified	_VFFILKNKVM_					0	0	0		nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	619.87012	1237.72569	-0.087017	-5.3939E-05	-0.38815	-0.0002406	-0.47516	-0.00029454	619.8696003275652	106.39	0.90228	106.39	105.85	106.75	0	0.36063	0.002567	NaN	15.642	46	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	165520			60727	15084	40556	40572							0.11633258495589871
VFFILKNKVM	10	Unmodified	_VFFILKNKVM_					0	0	0		nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	619.87012	1237.72569	-0.3053	-0.00018924	-0.18398	-0.00011404	-0.48927	-0.00030329	619.8696766793628	106.15	0.95587	106.12	105.74	106.69	-0.025146	0.09734	0.0028201	NaN	15.642	61	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	175140			60728	15084	40556	40572							0.11633258495589871
VFFILKNKVM	10	Unmodified	_VFFILKNKVM_					0	0	0		nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	619.87012	1237.72569	2.9972	0.0018579	-3.7608	-0.0023312	-0.76356	-0.00047331	619.8676262308716	106.15	1.1783	106.12	105.7	106.88	-0.037148	0.088899	-0.0016142	NaN	15.642	49	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	192030			60729	15084	40556	40572							0.11633258495589871
VFFILKNKVM	10	Unmodified	_VFFILKNKVM_					0	0	0		nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	619.87012	1237.72569	0.62081	0.00038482	-1.5281	-0.0009472	-0.90726	-0.00056238	619.8691746732625	105.98	1.0459	106.02	105.63	106.68	0.03833	-0.0046198	0.0011538	NaN	15.642	52	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	212220			60730	15084	40556	40572							0.11633258495589871
VFFILKNKVM	10	Unmodified	_VFFILKNKVM_					0	0	0		nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	619.87012	1237.72569	1.2747	0.00079014	-1.6969	-0.0010519	-0.42224	-0.00026173	619.8689842453496	105.78	0.77026	105.94	105.58	106.35	0.15925	-0.08576	0.00094441	NaN	15.642	35	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173800			60731	15084	40556	40572							0.11633258495589871
VFFILKNKVM	10	Unmodified	_VFFILKNKVM_					0	0	0		nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	619.87012	1237.72569	0.91945	0.00056994	-1.5908	-0.00098607	-0.67132	-0.00041613	619.8690894222458	105.83	0.69509	105.93	105.61	106.31	0.099007	-0.093716	0.001076	NaN	15.642	31	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146220			60732	15084	40556	40572							0.11633258495589871
VFFILKNKVM	10	Unmodified	_VFFILKNKVM_					0	0	0		nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	nc|ENSG00000169031|Q01955-2|COL4A3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	619.87012	1237.72569	-1.2247	-0.00075915	0.82304	0.00051018	-0.40165	-0.00024897	619.8704867960407	105.94	0.87907	106.02	105.61	106.49	0.073112	-0.010852	0.0040685	NaN	15.642	42	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133270			60733	15084	40556	40572							0.11633258495589871
VFFLIVVALL	10	Unmodified	_VFFLIVVALL_					0	0	0			REV__ENSG00000138658|ENST00000505019|ZGRF1	REV__ENSG00000138658|ENST00000505019|ZGRF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3299560546875	2	567.370278	1132.726	1.8003	0.0010215	2.5729	0.0014598	4.3732	0.0024812	567.3705227076528	92.442	0.81467	92.377	91.774	92.589	-0.06414					20	18	2	0	0	0	0.37624	1	9778	9778		19.36	0	1	40549	+		60734	19490	40557	40573	68821	68821					0.16495001487101035
VFFLIVVALL	10	Unmodified	_VFFLIVVALL_					0	0	0			REV__ENSG00000138658|ENST00000505019|ZGRF1	REV__ENSG00000138658|ENST00000505019|ZGRF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3298950195312	2	567.370278	1132.726	0.79141	0.00044902	1.4705	0.00083433	2.2619	0.0012834	567.3710986387692	92.232	0.29787	92.39	92.241	92.539	0.15875					8	6	2	0	0	0	0.37624	1	9331	9331		12.959	0	1	98536	+		60735	19490	40557	40573	68822	68822					0.16495001487101035
VFFNKRVY	8	Unmodified	_VFFNKRVY_					0	0	0		nc|ENSG00000095585|Q8WV28-2|BLNK;ENSG00000095585|ENST00000224337|BLNK	nc|ENSG00000095585|Q8WV28-2|BLNK	nc|ENSG00000095585|Q8WV28-2|BLNK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	537.3049926757812	2	536.800552	1071.58655	0.13037	6.9984E-05	-2.6223	-0.0014077	-2.492	-0.0013377	536.7974000429033	56.942	0.95939	57.497	57.006	57.965	0.55513					55	22	4	0	0	0	0.9159	1	5894	5894		44.531	0.41427	1	1016200			60736	1731	40558	40574	68823	68823					0.05362056922422198
VFFQHLHGHL	10	Unmodified	_VFFQHLHGHL_					0	0	0			REV__nc|ENSG00000160781|Q6TCH4-5|PAQR6	REV__nc|ENSG00000160781|Q6TCH4-5|PAQR6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	617.8251953125	2	617.827632	1233.64071	1.2049	0.00074439	-2.1298	-0.0013159	-0.92496	-0.00057147	617.8263056713324	78.046	0.53503	78.173	77.93	78.465	0.12695					37	16	3	0	0	0	0.47599	1	7361	7361		57.811	20.652	1	252600	+		60737	20739	40559	40575	68824	68824					0.033236490740137015
VFFTCAPI	8	Unmodified	_VFFTCAPI_					0	0	0		ENST00000421661.1_2_1:100524254-100527562:+|nuORF;ENSG00000156875|ENST00000370152|MFSD14A	ENST00000421661.1_2_1:100524254-100527562:+|nuORF	ENST00000421661.1_2_1:100524254-100527562:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2322692871094	2	449.230582	896.446611	0.59617	0.00026782	-0.62734	-0.00028182	-0.031168	-1.4001E-05	449.2302610410389	83.151	3.4859	83.298	82.027	85.513	0.14694					178	80	3	0	0	0	0.86791	1	7988	7988		28.254	1.4582	1	225870			60738	5398	40560	40576	68825	68825					-0.005754434063192093
VFGEKDSGEDW	11	Unmodified	_VFGEKDSGEDW_					0	0	0		ENST00000401408.5_1_2:55455228-55459402:-|nuORF	ENST00000401408.5_1_2:55455228-55459402:-|nuORF	ENST00000401408.5_1_2:55455228-55459402:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.7755126953125	2	634.775125	1267.5357	0.16242	0.0001031	3.7656	0.0023903	3.9281	0.0024934	634.7773669239996	50.354	0.83449	50.262	49.722	50.557	-0.091793					37	22	2	0	0	0	0.66009	1	3933	3933		37.508	4.6958	1	145020			60739	11236	40561	40577	68826	68826					-0.08736981703737001
VFGKAEILKA	10	Unmodified	_VFGKAEILKA_					0	0	0		ENST00000452242.5_1_2:172544016-172546679:+|nuORF	ENST00000452242.5_1_2:172544016-172546679:+|nuORF	ENST00000452242.5_1_2:172544016-172546679:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.32666015625	2	538.329142	1074.64373	-0.54037	-0.0002909	-3.5463	-0.0019091	-4.0867	-0.0022	538.3271646052639	101.22	3.8034	101.22	100.55	104.36	0					314	93	6	0	0	0	0.82886	1	10234	10234		37.812	12.237	1	48186000			60740	11916	40562	40578	68827	68827					0.10939479408125408
VFGLFIFDD	9	Unmodified	_VFGLFIFDD_					0	0	0		nc|ENSG00000123146|P48960-2|ADGRE5;nc|ENSG00000123146|P48960-3|ADGRE5;ENSG00000123146|ENST00000242786|ADGRE5	nc|ENSG00000123146|P48960-2|ADGRE5	nc|ENSG00000123146|P48960-2|ADGRE5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2413940429688	2	536.771126	1071.5277	-0.68149	-0.00036581	-1.3072	-0.00070168	-1.9887	-0.0010675	536.7707627718409	53.645	0.41972	54.23	53.998	54.418	0.58474					11	9	2	0	0	0	0.20789	1	5421	5421		25.45	0	1	182680			60741	3262	40563	40579	68828	68828					-0.005204641625596196
VFGRLRRAT	9	Unmodified	_VFGRLRRAT_					0	0	0			REV__nc|ENSG00000184428|Q969P6-2|TOP1MT	REV__nc|ENSG00000184428|Q969P6-2|TOP1MT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.32666015625	2	538.327799	1074.64105	1.246	0.00067076	-2.9722	-0.0016	-1.7262	-0.00092924	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.74721	1	10858	10858		37.159	5.2042	1	76567000	+		60742	22675	40564	40580	68829	68829					0.10671068793840277
VFGRRINKNL	10	Unmodified	_VFGRRINKNL_					0	0	0		ENST00000272067.10_2_2:277425-277497:+|nuORF	ENST00000272067.10_2_2:277425-277497:+|nuORF	ENST00000272067.10_2_2:277425-277497:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2478942871094	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.83	1	115.83	115.33	116.33	-0.0021133								0	0	0	0.45132	1	13931	13931		16.007	0	1				60743	9565	40565	40581	68830	68830					0.12079296028127828
VFGVKKHPA	9	Unmodified	_VFGVKKHPA_					0	0	0			REV__nc|ENSG00000173821|Q63HN8|RNF213	REV__nc|ENSG00000173821|Q63HN8|RNF213	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957763671875	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.78058	1	3934	3934		30.504	0	1	1346800	+		60744	21953	40566	40582	68831	68831					0.08446074267988024
VFHALPWL	8	Unmodified	_VFHALPWL_					0	0	0			REV__ENST00000249075.3_1_22:30639329-30639596:-|nuORF	REV__ENST00000249075.3_1_22:30639329-30639596:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7948913574219	2	491.779088	981.543623	-2.5951	-0.0012762	-2.1033	-0.0010344	-4.6984	-0.0023106	491.77799443467524	62.124	0.42521	62.153	61.861	62.287	0.029575					26	15	2	0	0	0	0.4196	1	5767	5767		24.504	2.5441	1	108650	+		60745	24276	40567	40583	68832	68832					0.05211286864994236
VFIATVTG	8	Unmodified	_VFIATVTG_					0	0	0		ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.23260498046875	2	404.234179	806.453805	1.1413	0.00046136	-4.2801	-0.0017302	-3.1388	-0.0012688	404.2322730858219	87.728	4.1159	87.654	87.033	91.149	-0.074005					143	97	3	0	0	0	0.88915	1	9104	9104		35.201	1.6851	1	383240			60746	7340	40568	40584	68833	68833					0.04283612465769693
VFIFFFLCV	9	Unmodified	_VFIFFFLCV_					0	0	0			REV__nc|ENSG00000165164|Q6ZTR5-6|CFAP47	REV__nc|ENSG00000165164|Q6ZTR5-6|CFAP47	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3299560546875	2	567.806457	1133.59836	1.5001	0.00085175	3.3391	0.001896	4.8392	0.0027477	567.808305374781	94.062	0.9285	94.108	93.322	94.25	0.045456					32	21	2	0	0	0	0.20789	1	9828	9828		39.021	15.979	1	237340	+		60747	30000	40569	40585	68834	68834					0.03690537621378098
VFIHEALL	8	Unmodified	_VFIHEALL_					0	0	0		ENSG00000142949|ENST00000359947|PTPRF;nc|ENSG00000142949|P10586-2|PTPRF;ENST00000477970.1_1_1:44078891-44086093:+|nuORF	ENSG00000142949|ENST00000359947|PTPRF	ENSG00000142949|ENST00000359947|PTPRF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.20367431640625	2	471.276378	940.538203	-0.8	-0.00037702	-2.5997	-0.0012252	-3.3997	-0.0016022	471.27509387892985	28.86	0.51514	28.83	28.525	29.04	-0.029207					23	11	3	0	0	0	0.4196	1	1739	1739		20.482	8.275	1	74024			60748	4591	40570	40586	68835	68835					0.06555563282518051
VFIINTKTLA	10	Unmodified	_VFIINTKTLA_					0	0	0			REV__nc|ENSG00000157214|Q8NFT2-3|STEAP2	REV__nc|ENSG00000157214|Q8NFT2-3|STEAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.341064453125	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.84112	1	12582	12582		37.159	0.71236	1	4071000	+		60749	20535	40571	40587	68836	68836					0.1153574857962667
VFILGQTNQ	9	Unmodified	_VFILGQTNQ_					0	0	0			REV__ENST00000470670.5_1_1:228284963-228285711:+|nuORF	REV__ENST00000470670.5_1_1:228284963-228285711:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2774963378906	2	510.279649	1018.54475	1.0284	0.00052475	-1.0093	-0.00051502	0.019071	9.7314E-06	510.2789885805911	56.133	0.70097	56.693	56.395	57.096	0.55954					45	17	3	0	0	0	0.026451	1	5820	5820		120.62	16.564	1	3742000	+		60750	19128	40572	40588	68837	68837					0.036214564432498264
VFILTGAS	8	Unmodified	_VFILTGAS_					0	0	0		nc|ENSG00000113073|Q96Q91-4|SLC4A9;nc|ENSG00000113073|Q96Q91-2|SLC4A9;ENSG00000113073|ENST00000506757|SLC4A9;nc|ENSG00000113073|Q96Q91|SLC4A9	nc|ENSG00000113073|Q96Q91-4|SLC4A9	nc|ENSG00000113073|Q96Q91-4|SLC4A9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2326965332031	2	404.234179	806.453805	-1.8251	-0.00073778	-1.1309	-0.00045714	-2.956	-0.0011949	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.88915	1	8207	8207		35.201	0	1	3315300			60751	2696	40573	40589	68838	68838					0.04283612465758324
VFILVLSPM	9	Unmodified	_VFILVLSPM_					0	0	0		ENST00000590993.1_1_19:36883752-36884112:-|nuORF	ENST00000590993.1_1_19:36883752-36884112:-|nuORF	ENST00000590993.1_1_19:36883752-36884112:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8038330078125	2	509.803914	1017.59328	-0.054339	-2.7702E-05	-0.32424	-0.0001653	-0.37857	-0.000193	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.7932	1	8716	8716		20.482	0	1	2906900			60752	14268	40574	40590	68839	68839					0.08518233758775295
VFILVLSPM	9	Unmodified	_VFILVLSPM_					0	0	0		ENST00000590993.1_1_19:36883752-36884112:-|nuORF	ENST00000590993.1_1_19:36883752-36884112:-|nuORF	ENST00000590993.1_1_19:36883752-36884112:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.80377197265625	2	509.803914	1017.59328	0.22319	0.00011378	-0.60793	-0.00030993	-0.38474	-0.00019614	509.80351350934416	86.429	3.996	86.484	85.149	89.145	0.055641					361	93	5	0	0	0	0.78851	1	8723	8723		28.254	6.2944	1	3453000			60753	14268	40574	40590	68840	68840					0.08518233758775295
VFILVLSPM	9	Unmodified	_VFILVLSPM_					0	0	0		ENST00000590993.1_1_19:36883752-36884112:-|nuORF	ENST00000590993.1_1_19:36883752-36884112:-|nuORF	ENST00000590993.1_1_19:36883752-36884112:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8033142089844	2	509.803914	1017.59328	-0.38176	-0.00019462	-0.061773	-3.1492E-05	-0.44354	-0.00022612	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.7932	1	8101	8101		26.796	1.222	1	948010			60754	14268	40574	40590	68841	68841					0.08518233758775295
VFILVLSPM	9	Unmodified	_VFILVLSPM_					0	0	0		ENST00000590993.1_1_19:36883752-36884112:-|nuORF	ENST00000590993.1_1_19:36883752-36884112:-|nuORF	ENST00000590993.1_1_19:36883752-36884112:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8037109375	2	509.803914	1017.59328	-1.4574	-0.000743	0.99571	0.00050762	-0.46171	-0.00023538	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.76402	1	8249	8249		35.201	9.7505	1	920080			60755	14268	40574	40590	68842	68842					0.08518233758775295
VFILVRGPE	9	Unmodified	_VFILVRGPE_					0	0	0		ENST00000586243.5_1_19:1206467-1206545:+|nuORF	ENST00000586243.5_1_19:1206467-1206545:+|nuORF	ENST00000586243.5_1_19:1206467-1206545:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3108520507812	2	515.30821	1028.60187	-0.55947	-0.0002883	3.8721	0.0019953	3.3126	0.001707	515.3100019000319	59.336	1.1389	59.727	59.399	60.538	0.39077					69	28	3	0	0	0	0.28163	1	6208	6208		66.429	4.3219	1	1213100			60756	14159	40575	40591	68843	68843					0.08870923719609891
VFIRSSSF	8	Unmodified	_VFIRSSSF_					0	0	0		ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7687072753906	2	471.75581	941.497067	0.14222	6.7092E-05	1.2135	0.00057247	1.3557	0.00063956	471.755557436413	51.171	0.20863	51.606	51.45	51.659	0.43505					7	4	2	0	0	0	0.4196	1	5058	5058		19.36	0	1	70324			60757	2245	40576	40592	68844	68844					0.023978022430469537
VFISSITPLTH	11	Unmodified	_VFISSITPLTH_					0	0	0		ENST00000594017.5_1_19:49497156-49513425:+|nuORF	ENST00000594017.5_1_19:49497156-49513425:+|nuORF	ENST00000594017.5_1_19:49497156-49513425:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.8984680175781	3	405.564168	1213.67067	-0.19603	-7.9504E-05	1.5663	0.00063523	1.3703	0.00055573	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.76699	1	5989	5989		16.53	4.5975	1	328790			60758	14313	40577	40593	68845	68845					0.0723854322866373
VFIVKLPK	8	Unmodified	_VFIVKLPK_					0	0	0			REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	REV__nc|ENSG00000148634|Q5GLZ8-6|HERC4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28759765625	2	472.320589	942.626624	-0.024039	-1.1354E-05	3.1115	0.0014696	3.0874	0.0014583	472.3215579695312	95.595	0.21248	95.642	95.579	95.791	0.046982					6	4	2	0	0	0	0.4196	1	10114	10114		8.8223	7.3575	1	46537	+		60759	20128	40578	40594	68846	68846					0.15301603592990887
VFIVKNRR	8	Unmodified	_VFIVKNRR_					0	0	0			REV__ENSG00000206384|ENST00000358511|COL6A6	REV__ENSG00000206384|ENST00000358511|COL6A6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3148193359375	2	516.327268	1030.63998	1.8989	0.00098047	-0.35535	-0.00018348	1.5436	0.00079699	516.326755204515	98.987	0.1911	99.348	99.293	99.484	0.36136					7	4	2	0	0	0	0.4196	1	11958	11958		35.201	0	1	180840	+		60760	23587	40579	40595	68847	68847					0.12588854424916462
VFIVLEIGR	9	Unmodified	_VFIVLEIGR_					0	0	0		nc|ENSG00000173559|Q96AH0-3|NABP1;ENSG00000173559|ENST00000425611|NABP1	nc|ENSG00000173559|Q96AH0-3|NABP1	nc|ENSG00000173559|Q96AH0-3|NABP1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3033447265625	2	523.32386	1044.63317	-0.79251	-0.00041474	-2.5862	-0.0013534	-3.3787	-0.0017681	523.3228121409206	89.625	0.3921	89.625	89.387	89.779	0					13	8	2	0	0	0	0.20789	1	8682	8682		23.042	0	1	54739			60761	6867	40580	40596	68848	68848					0.1126349675369056
VFIVTFIY	8	Unmodified	_VFIVTFIY_					0	0	0			REV__ENSG00000006283|ENST00000359106|CACNA1G	REV__ENSG00000006283|ENST00000359106|CACNA1G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2904357910156	2	501.288954	1000.56336	-0.50311	-0.0002522	3.4354	0.0017221	2.9323	0.0014699	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.89457	1	8731	8731		37.028	0	1	10459000	+		60762	16099	40581	40597	68849	68849					0.06309618085083457
VFIVVQFNPD	10	Unmodified	_VFIVVQFNPD_					0	0	0			REV__ENSG00000205330|ENST00000642104|OR6C1	REV__ENSG00000205330|ENST00000642104|OR6C1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427124023438	2	589.316232	1176.61791	0.80994	0.00047731	-4.0606	-0.0023929	-3.2506	-0.0019156	589.3138849023544	92.068	0.51393	92.224	91.809	92.323	0.15614					16	11	2	0	0	0	0.37624	1	9284	9284		40.778	10.46	1	81958	+		60763	23553	40582	40598	68850	68850					0.03666585165842662
VFKAKEDCKLV	11	Unmodified	_VFKAKEDCKLV_					0	0	0			REV__ENSG00000260314|ENST00000569591|MRC1	REV__ENSG00000260314|ENST00000569591|MRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3590087890625	2	640.357573	1278.70059	-1.1585	-0.00074183	3.0988	0.0019844	1.9404	0.0012425	640.3594398218631	99.341	2.5092	99.527	98.68	101.19	0.18581					187	58	4	0	0	0	0.69995	1	10364	10364		31.53	1.2121	1	585260	+		60764	23937	40583	40599	68851	68851					0.07239158902325471
VFKAPAPRP	9	Unmodified	_VFKAPAPRP_					0	0	0		nc|ENSG00000140829|Q92620-2|DHX38;ENSG00000140829|ENST00000268482|DHX38	nc|ENSG00000140829|Q92620-2|DHX38	nc|ENSG00000140829|Q92620-2|DHX38	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7955322265625	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.146	1	73.186	72.686	73.686	0.040024								0	0	0	0.33676	1	6984	6984		18.324	1.8513	1				60765	4458	40584	40600	68852	68852					0.08446074267988024
VFKCPEDQL	9	Unmodified	_VFKCPEDQL_					0	0	0		ENST00000461195.5_1_17:27071094-27074974:+|nuORF;ENST00000394925.5_1_17:27071094-27074489:+|nuORF;nc|ENSG00000076604|Q9BUZ4-2|TRAF4;ENSG00000076604|ENST00000262395|TRAF4	ENST00000461195.5_1_17:27071094-27074974:+|nuORF	ENST00000461195.5_1_17:27071094-27074974:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.7646484375	2	539.765517	1077.51648	0.40301	0.00021753	-3.5551	-0.0019189	-3.1521	-0.0017014	539.7636263325178	76.329	0.47797	76.377	76.104	76.582	0.047981					31	18	2	0	0	0	0.78983	1	7446	7446		27.882	1.0861	1	87616			60766	1361	40585	40601	68853	68853					-0.019176095283455652
VFKEFNLY	8	Unmodified	_VFKEFNLY_					0	0	0			REV__ENSG00000139865|ENST00000553443|TTC6	REV__ENSG00000139865|ENST00000553443|TTC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2797241210938	2	530.279118	1058.54368	-0.48747	-0.0002585	2.4103	0.0012781	1.9228	0.0010196	530.2810875098063	59.125	0.77987	59.118	58.652	59.432	-0.0074387					63	30	3	0	0	0	0.9295	1	5063	5063		55.504	6.0627	1	188850	+		60767	19576	40586	40602	68854	68854					0.01675242074338712
VFKIRSLFRRL	11	Unmodified	_VFKIRSLFRRL_					0	0	0			REV__ENSG00000084444|ENST00000197268|FAM234B	REV__ENSG00000084444|ENST00000197268|FAM234B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.3095703125	3	478.973384	1433.89832	0.22007	0.00010541	1.4347	0.00068717	1.6548	0.00079258	478.9740845349807	44.981	2.0928	44.958	43.729	45.822	-0.023079					123	48	4	0	0	0	0.7896	1	3620	3620		13.508	3.8618	1	463950	+		60768	16872	40587	40603	68855	68855					0.19872965947160992
VFKKAKRLC	9	Unmodified	_VFKKAKRLC_					0	0	0			REV__ENSG00000007908|ENST00000333360|SELE	REV__ENSG00000007908|ENST00000333360|SELE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8414916992188	2	546.839154	1091.66375	-1.4624	-0.00079971	2.5859	0.0014141	1.1235	0.00061435	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.7932	1	10707	10707		23.042	1.0826	1	44929000	+		60769	16125	40588	40604	68856	68856					0.12158951867127143
VFKKRRTEN	9	Unmodified	_VFKKRRTEN_					0	0	0		nc|ENSG00000120688|O75554-2|WBP4;ENSG00000120688|ENST00000379487|WBP4	nc|ENSG00000120688|O75554-2|WBP4	nc|ENSG00000120688|O75554-2|WBP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3426513671875	2	589.343646	1176.67274	-0.6745	-0.00039751	-0.65118	-0.00038377	-1.3257	-0.00078128	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.76255	2	9867	9867;9989		35.618	1.1893	1	16185000			60770	3143	40589	40605	68857;68858	68857					0.09147016757174242
VFKKRRTEN	9	Unmodified	_VFKKRRTEN_					0	0	0		nc|ENSG00000120688|O75554-2|WBP4;ENSG00000120688|ENST00000379487|WBP4	nc|ENSG00000120688|O75554-2|WBP4	nc|ENSG00000120688|O75554-2|WBP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3427124023438	2	589.343646	1176.67274	2.2135	0.0013045	-3.7891	-0.0022331	-1.5756	-0.00092856	589.3412525829298	92.44	2.9713	92.375	90.396	93.367	-0.06414					251	71	4	0	0	0	0.76255	1	9702	9702		35.618	2.8059	1	5579200			60771	3143	40589	40605	68859	68859					0.09147016757174242
VFKTPRAPP	9	Unmodified	_VFKTPRAPP_					0	0	0		ENSG00000105722|ENST00000222329|ERF;nc|ENSG00000105722|P50548-2|ERF	ENSG00000105722|ENST00000222329|ERF	ENSG00000105722|ENST00000222329|ERF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8014221191406	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.322	1	49.322	48.822	49.822	0								0	0	0	0.30416	1	3879	3879		29.15	2.3535	1				60772	2246	40590	40606	68860	68860					0.08122056922411502
VFKTPVVKAS	10	Unmodified	_VFKTPVVKAS_					0	0	0			REV__nc|ENSG00000038427|P13611-5|VCAN	REV__nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3265380859375	2	538.329142	1074.64373	-0.54037	-0.0002909	-3.5463	-0.0019091	-4.0867	-0.0022	538.3271646052639	101.22	3.8034	101.22	100.55	104.36	0					314	93	6	0	0	0	0.8545	2	10535	10463;10535		36.447	4.9169	1	48186000	+		60773	16305	40591	40607	68861;68862	68862					0.10939479408125408
VFKTPVVKAS	10	Unmodified	_VFKTPVVKAS_					0	0	0			REV__nc|ENSG00000038427|P13611-5|VCAN	REV__nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3272094726562	2	538.329142	1074.64373	-0.15636	-8.4174E-05	-4.0212	-0.0021647	-4.1776	-0.0022489	538.3269075153179	101.16	2.8222	101.19	100.44	103.26	0.031036					310	67	7	0	0	0	0.80179	2	10981	10981;11065		39.253	5.0803	1	74691000	+		60774	16305	40591	40607	68863;68864	68863					0.10939479408125408
VFKTPVVKAS	10	Unmodified	_VFKTPVVKAS_					0	0	0			REV__nc|ENSG00000038427|P13611-5|VCAN	REV__nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.3267211914062	2	538.329142	1074.64373	-0.15628	-8.4129E-05	-3.1712	-0.0017072	-3.3275	-0.0017913	538.3273734998361	103.57	1.2288	103.57	103.11	104.34	-0.0016403					90	29	4	0	0	0	0.86471	1	11172	11172		30.318	2.4355	1	1025700	+		60775	16305	40591	40607	68865	68865					0.10939479408125408
VFKTPVVKAS	10	Unmodified	_VFKTPVVKAS_					0	0	0			REV__nc|ENSG00000038427|P13611-5|VCAN	REV__nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326904296875	2	538.329142	1074.64373	-1.4901	-0.00080219	-2.8806	-0.0015507	-4.3708	-0.0023529	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.86272	1	10749	10749		24.519	0	1	93615000	+		60776	16305	40591	40607	68866	68866					0.10939479408125408
VFKVTFIVIR	10	Unmodified	_VFKVTFIVIR_					0	0	0			REV__ENST00000488537.1_1_1:145440673-145441098:+|nuORF	REV__ENST00000488537.1_1_1:145440673-145441098:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3554077148438	2	611.389534	1220.76451	0.20773	0.00012701	3.4946	0.0021365	3.7023	0.0022636	611.3902113437654	95.939	0.26073	95.986	95.877	96.138	0.046982					7	5	2	0	0	0	0.37624	1	10168	10168		10.265	0	1	64409	+		60777	27596	40592	40608	68867	68867					0.1629630712159269
VFLCSPFIK	9	Carbamidomethyl (C)	_VFLC(Carbamidomethyl (C))SPFIK_	VFLC(1)SPFIK		VFLC(41)SPFIK		0	1	0			REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	556.3091430664062	2	555.804445	1109.59434	-0.42033	-0.00023362	3.5643	0.0019811	3.144	0.0017474	555.8063865740231	59.517	0.80318	59.518	59.103	59.906	0.00051498					49	24	3	0	0	0	0.69624	1	5085	5085		40.778	6.6056	1	172100	+		60778	30240	40593	40609	68868	68868	360				0.04392448127669013
VFLDLGVL	8	Unmodified	_VFLDLGVL_					0	0	0			REV__ENSG00000241973|ENST00000255882|PI4KA	REV__ENSG00000241973|ENST00000255882|PI4KA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2631530761719	2	438.265479	874.516405	-1.5666	-0.00068658	-3.1125	-0.0013641	-4.6791	-0.0020507	438.2640033133023	45.783	1.2838	45.798	45.032	46.315	0.015511					49	34	2	0	0	0	0.9159	1	3277	3277		44.531	9.3304	1	101570	+		60779	23828	40594	40610	68869	68869					0.0741275853396246
VFLFKLVDHLI	11	Unmodified	_VFLFKLVDHLI_					0	0	0			REV__nc|ENSG00000167723|Q8NET8-3|TRPV3	REV__nc|ENSG00000167723|Q8NET8-3|TRPV3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.9437255859375	3	448.607708	1342.80129	-0.33073	-0.00014837	4.0111	0.0017994	3.6804	0.0016511	448.60926417433876	75.297	1.2081	75.251	74.823	76.031	-0.045982					90	31	4	0	0	0	0.79224	1	7431	7431		12.957	0.52465	1	359860	+		60780	21425	40595	40611	68870	68870					0.14360558947510071
VFLFLDKYGL	10	Unmodified	_VFLFLDKYGL_					0	0	0		nc|ENSG00000110911|P49281-5|SLC11A2;ENSG00000110911|ENST00000262052|SLC11A2;nc|ENSG00000110911|P49281|SLC11A2;nc|ENSG00000110911|P49281-3|SLC11A2;nc|ENSG00000110911|P49281-4|SLC11A2	nc|ENSG00000110911|P49281-5|SLC11A2	nc|ENSG00000110911|P49281-5|SLC11A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.56536865234375	3	405.565509	1213.6747	-1.5858	-0.00064316	-0.39276	-0.00015929	-1.9786	-0.00080245	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.85633	1	5361	5361		21.686	0	1	181560			60781	2550	40596	40612	68871	68871					0.07640632722359442
VFLHTVKGT	9	Unmodified	_VFLHTVKGT_					0	0	0		ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2903747558594	2	501.292559	1000.57057	0.16565	8.304E-05	-4.0766	-0.0020436	-3.911	-0.0019605	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.74721	1	9751	9751		37.159	2.0071	1	2717900			60782	3269	40597	40613	68872	68872					0.07030350685522535
VFLHVLHSAP	10	Unmodified	_VFLHVLHSAP_					0	0	0		ENSG00000135346|ENST00000627148|CGA	ENSG00000135346|ENST00000627148|CGA	ENSG00000135346|ENST00000627148|CGA	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3145141601562	2	560.319109	1118.62366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.242	1	47.279	46.779	47.779	0.037731								0	0	0	0.45132	1	3524	3524		31.955	0.42505	1				60783	4009	40598	40614	68873	68873					0.06909728468167486
VFLIAKHS	8	Unmodified	_VFLIAKHS_					0	0	0			REV__nc|ENSG00000196236|Q9NQH7-3|XPNPEP3	REV__nc|ENSG00000196236|Q9NQH7-3|XPNPEP3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2641296386719	2	457.776545	913.538538	0.59124	0.00027066	3.9485	0.0018075	4.5398	0.0020782	457.7787593207722	81.934	0.21814	82.08	81.895	82.113	0.1455					6	4	2	0	0	0	0.4196	1	7870	7870		12.207	0	1	16189	+		60784	23106	40599	40615	68874	68874					0.07830983002372705
VFLIIKTGGVT	11	Unmodified	_VFLIIKTGGVT_					0	0	0			REV__ENST00000513988.1_1_3:98237648-98240280:-|nuORF	REV__ENST00000513988.1_1_3:98237648-98240280:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3561401367188	2	574.357899	1146.70125	-1.0357	-0.00059487	-2.3996	-0.0013783	-3.4354	-0.0019731	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.75495	1	10561	10561		20.947	0.95016	1	715310	+		60785	28003	40600	40616	68875	68875					0.13376321613714026
VFLLALTKMAS	11	Unmodified	_VFLLALTKMAS_					0	0	0			REV__ENSG00000109061|ENST00000226207|MYH1	REV__ENSG00000109061|ENST00000226207|MYH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8563842773438	2	597.35176	1192.68897	2.4166	0.0014436	3.706	0.0022138	6.1226	0.0036574	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.6921	1	10201	10201		32.812	2.4947	1	8047600	+		60786	17743	40601	40617	68876	68876					0.10032961879005597
VFLLFCPSVLK	11	Unmodified	_VFLLFCPSVLK_					0	0	0			REV__ENSG00000142319|ENST00000270349|SLC6A3	REV__ENSG00000142319|ENST00000270349|SLC6A3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3700561523438	2	633.369952	1264.72535	-0.11908	-7.5423E-05	-1.0447	-0.00066168	-1.1638	-0.0007371	633.369155594739	96.136	3.1469	96.136	93.927	97.074	0					214	73	4	0	0	0	0.65746	1	9445	9445		37.812	7.4938	1	2722900	+		60787	19736	40602	40618	68877	68877					0.1035783877571248
VFLLGTTG	8	Unmodified	_VFLLGTTG_					0	0	0		ENSG00000134817|ENST00000606794|APLNR	ENSG00000134817|ENST00000606794|APLNR	ENSG00000134817|ENST00000606794|APLNR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.2328796386719	2	404.234179	806.453805	-1.8204	-0.00073588	-0.96943	-0.00039188	-2.7898	-0.0011278	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.87276	1	8296	8296		29.842	4.2675	1	4754100			60788	3961	40603	40619	68878	68878					0.04283612465769693
VFLLGTTG	8	Unmodified	_VFLLGTTG_					0	0	0		ENSG00000134817|ENST00000606794|APLNR	ENSG00000134817|ENST00000606794|APLNR	ENSG00000134817|ENST00000606794|APLNR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.2325439453125	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.82464	1	8484	8484		21.702	0	1	4227600			60789	3961	40603	40619	68879	68879					0.04283612465769693
VFLLIWISLM	10	Unmodified	_VFLLIWISLM_					0	0	0			REV__ENSG00000176988|ENST00000370467|FMR1NB	REV__ENSG00000176988|ENST00000370467|FMR1NB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7461242675781	3	412.247123	1233.71954	-1.8195	-0.00075007	3.2796	0.001352	1.4601	0.00060194	412.249136314354	85.227	0.47553	85.412	85.016	85.491	0.18523					12	10	2	0	0	0	0.37624	1	8303	8303		36.447	13.867	1	29919	+		60790	22169	40604	40620	68880	68880					0.11202740264070599
VFLLLTPLH	9	Unmodified	_VFLLLTPLH_					0	0	0			REV__ENST00000357258.8_2_3:114050167-114050428:-|nuORF	REV__ENST00000357258.8_2_3:114050167-114050428:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.8153686523438	2	526.828778	1051.643	0.80975	0.0004266	3.4983	0.001843	4.308	0.0022696	526.8304317829728	98.564	1.3663	98.72	98.276	99.642	0.15659					58	31	3	0	0	0	0.20789	1	10241	10241		42.474	0	1	269120	+		60791	25408	40605	40621	68881	68881					0.11924684759082993
VFLLTTRVGG	10	Unmodified	_VFLLTTRVGG_					0	0	0		ENSG00000225830|ENST00000355832|ERCC6	ENSG00000225830|ENST00000355832|ERCC6	ENSG00000225830|ENST00000355832|ERCC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8167114257812	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.8608	1	8411	8411		34.173	7.4796	1	1159800			60792	8710	40606	40622	68882	68882					0.09498308748334239
VFLLTTRVGG	10	Unmodified	_VFLLTTRVGG_					0	0	0		ENSG00000225830|ENST00000355832|ERCC6	ENSG00000225830|ENST00000355832|ERCC6	ENSG00000225830|ENST00000355832|ERCC6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8157958984375	2	531.818941	1061.62333	0.49482	0.00026316	-4.4068	-0.0023436	-3.912	-0.0020805	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.80179	1	10061	10061		39.253	1.4413	1	1227700			60793	8710	40606	40622	68883	68883					0.09498308748334239
VFLMLDLVI	9	Unmodified	_VFLMLDLVI_					0	0	0			REV__ENST00000490674.1_1_2:113416436-113416796:+|nuORF	REV__ENST00000490674.1_1_2:113416436-113416796:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.816650390625	2	531.817021	1061.61949	0.7269	0.00038658	-1.0502	-0.00055851	-0.3233	-0.00017194	531.8163357370391	88.558	5.1465	88.709	87.469	92.616	0.15055					395	122	5	0	0	0	0.78058	1	8887	8887		30.504	1.3541	1	4496300	+		60794	27640	40607	40623	68884	68884					0.09114502930242452
VFLRALTLI	9	Unmodified	_VFLRALTLI_					0	0	0			REV__nc|ENSG00000124615|Q9NZB8-4|MOCS1	REV__nc|ENSG00000124615|Q9NZB8-4|MOCS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035278320312	2	523.342052	1044.66955	-1.539	-0.00080542	-2.4544	-0.0012845	-3.9934	-0.0020899	523.3412136597166	88.508	0.16457	88.681	88.618	88.783	0.17234					5	3	2	0	0	0	0.20789	1	8751	8751		7.1934	0	1	47198	+		60795	18602	40608	40624	68885	68885					0.14900373650425536
VFLTKQKKQY	10	Unmodified	_VFLTKQKKQY_					0	0	0			REV__ENST00000399799.2_1_18:18619516-18622115:-|nuORF	REV__ENST00000399799.2_1_18:18619516-18622115:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8822631835938	2	641.87953	1281.74451	2.6248	0.0016848	1.9473	0.0012499	4.5721	0.0029347	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.86218	1	11738	11738		32.812	3.6424	1	4455800	+		60796	26239	40609	40625	68886	68886					0.11490511391002656
VFLVGTAT	8	Unmodified	_VFLVGTAT_					0	0	0			REV__ENSG00000169071|ENST00000375708|ROR2	REV__ENSG00000169071|ENST00000375708|ROR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.2327880859375	2	404.234179	806.453805	-1.8204	-0.00073588	-0.96943	-0.00039188	-2.7898	-0.0011278	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.82464	1	8273	8273		21.702	0	1	4754100	+		60797	21545	40610	40626	68887	68887					0.04283612465758324
VFLVVELG	8	Unmodified	_VFLVVELG_					0	0	0			REV__ENSG00000171133|ENST00000302681|OR2K2	REV__ENSG00000171133|ENST00000302681|OR2K2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.76458740234375	2	438.265479	874.516405	-1.2142	-0.00053214	-3.9242	-0.0017198	-5.1384	-0.002252	438.2636379536876	41.654	4.7049	41.615	40.955	45.66	-0.039398					242	113	3	0	0	0	0.86791	1	3542	3542		28.254	0	1	4828000	+		60798	21715	40611	40627	68888	68888					0.07412758533951092
VFMKELIPKL	10	Unmodified	_VFMKELIPKL_					0	0	0			REV__ENSG00000214285|ENST00000398023|NPS	REV__ENSG00000214285|ENST00000398023|NPS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.5839538574219	3	406.582394	1216.72535	0.73404	0.00029845	3.3436	0.0013595	4.0776	0.0016579	406.5836501066581	111.89	0.52492	111.96	111.59	112.12	0.069542					42	15	3	0	0	0	0.8573	1	12022	12022		16.007	1.3131	1	1799400	+		60799	23650	40612	40628	68889	68889					0.12565838775731208
VFNELKFY	8	Unmodified	_VFNELKFY_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2811889648438	2	530.279118	1058.54368	0.45501	0.00024128	2.0103	0.001066	2.4653	0.0013073	530.2806991102823	58.965	0.78107	59.079	58.607	59.388	0.11396					65	30	3	0	0	0	0.884	1	5035	5035		33.516	0	1	246380			60800	8866	40613	40629	68890	68890					0.01675242074338712
VFNHTGFWYV	10	Unmodified	_VFNHTGFWYV_					0	0	0		ENST00000356577.8_2_21:34948883-34949093:+|nuORF	ENST00000356577.8_2_21:34948883-34949093:+|nuORF	ENST00000356577.8_2_21:34948883-34949093:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	635.595947265625	2	635.306198	1268.59784	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.979	1	71.014	70.514	71.514	0.034004								0	0	0	0.45132	1	6713	6713		25.574	1.0549	1				60801	10370	40614	40630	68891	68891					-0.025711657741112504
VFNIDLKE	8	Unmodified	_VFNIDLKE_					0	0	0		nc|ENSG00000163565|Q16666-8|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-2|IFI16;ENSG00000163565|ENST00000295809|IFI16	nc|ENSG00000163565|Q16666-8|IFI16	nc|ENSG00000163565|Q16666-8|IFI16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.7689208984375	2	489.26875	976.522947	-3.0941	-0.0015138	0.53349	0.00026102	-2.5606	-0.0012528	489.26883558760886	40.692	0.67071	40.698	40.36	41.031	0.0065727					27	17	2	0	0	0	0.89494	1	2953	2953		37.159	0	1	273170			60802	5827	40615	40631	68892	68892					0.03374651694673503
VFNQQWPIKRR	11	Unmodified	_VFNQQWPIKRR_					0	0	0			REV__ENSG00000152580|ENST00000282466|IGSF10	REV__ENSG00000152580|ENST00000282466|IGSF10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2991027832031	3	491.280877	1470.8208	2.8442	0.0013973	3.9642	0.0019475	6.8084	0.0033448	491.2829855481542	107.89	0.1106	107.86	107.77	107.88	-0.031487					6	2	3	0	0	0	0.17996	1	11972	11972		12.433	3.221	1	1171000	+		60803	20306	40616	40632	68893	68893					0.10422328010963611
VFNSGLAAVK	10	Unmodified	_VFNSGLAAVK_					0	0	0		nc|ENSG00000157827|Q96PY5|FMNL2;ENSG00000157827|ENST00000288670|FMNL2	nc|ENSG00000157827|Q96PY5|FMNL2	nc|ENSG00000157827|Q96PY5|FMNL2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	503.2857971191406	2	503.290017	1004.56548	-0.060584	-3.0491E-05	3.163	0.0015919	3.1025	0.0015614	503.29162474587787	109.78	0.70062	109.73	109.4	110.1	-0.055084					61	35	2	0	0	0	0.37624	1	11951	11951		26.693	0	1	1014200			60804	15024	40617	40633	68894	68894					0.06338046822895649
VFNSPVLGR	9	Unmodified	_VFNSPVLGR_					0	0	0			REV__nc|ENSG00000060709|O15034-2|RIMBP2;REV__nc|ENSG00000005379|O95153-2|TSPOAP1;REV__ENSG00000183246|ENST00000433039|RIMBP3C	REV__nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3007507324219	2	494.782359	987.550165	-0.64914	-0.00032118	-3.9568	-0.0019578	-4.606	-0.002279	494.7804467291174	99.478	0.42329	99.525	99.34	99.764	0.047523					12	9	2	0	0	0	0.20789	1	10637	10637		11.511	0	1	33729	+		60805	16084;22587;16451	40618	40634	68895	68895					0.05589180025708629
VFPDPLALSV	10	Unmodified	_VFPDPLALSV_					0	0	0		ENST00000225964.9_1_17:48268227-48270392:-|nuORF	ENST00000225964.9_1_17:48268227-48270392:-|nuORF	ENST00000225964.9_1_17:48268227-48270392:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.299560546875	2	529.30005	1056.58555	-0.42214	-0.00022344	0.24778	0.00013115	-0.17436	-9.2287E-05	529.2999611674875	58.584	1.1615	58.977	58.566	59.728	0.39209					60	27	3	0	0	0	0.84112	1	6152	6152		37.159	2.0071	1	1279600			60806	9194	40619	40635	68896	68896					0.05951797762827482
VFPFKIPG	8	Unmodified	_VFPFKIPG_					0	0	0		ENST00000517670.1_1_8:82192396-82192848:-|nuORF	ENST00000517670.1_1_8:82192396-82192848:-|nuORF	ENST00000517670.1_1_8:82192396-82192848:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	452.7681884765625	2	452.768189	903.521825	0.2516	0.00011392	0.40998	0.00018563	0.66158	0.00029954	452.7682264428771	29.782	1.1421	29.809	29.156	30.298	0.026833					41	32	2	0	0	0	0.92176	1	1494	1494		46.766	9.738	1	71812			60807	13103	40620	40636	68897	68897					0.0662048211642059
VFPGARLL	8	Unmodified	_VFPGARLL_					0	0	0		nc|ENSG00000142453|Q86X55-2|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1;ENSG00000142453|ENST00000327064|CARM1	nc|ENSG00000142453|Q86X55-2|CARM1	nc|ENSG00000142453|Q86X55-2|CARM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7733459472656	2	436.771263	871.527973	1.7437	0.00076159	3.2678	0.0014273	5.0114	0.0021889	436.7728952540282	27.595	1.1661	27.572	27.227	28.393	-0.023556					56	27	3	0	0	0	0.80963	1	1289	1289		15.636	0	1	71535			60808	4564	40621	40637	68898	68898					0.08707000347953908
VFPGLCTHGT	10	Unmodified	_VFPGLCTHGT_					0	0	0		ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3137817382812	2	516.252577	1030.4906	-0.2601	-0.00013428	3.9088	0.0020179	3.6487	0.0018837	516.2530394187902	99.035	0.73432	99.257	98.921	99.656	0.22263					33	17	3	0	0	0	0.37624	1	10312	10312		55.504	2.5675	1	236370			60809	4563	40622	40638	68899	68899					-0.02342458979978801
VFPILFGFF	9	Unmodified	_VFPILFGFF_					0	0	0			REV__nc|ENSG00000164220|O00254-2|F2RL2	REV__nc|ENSG00000164220|O00254-2|F2RL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.802001953125	2	543.804771	1085.59499	-0.095009	-5.1666E-05	-3.5905	-0.0019525	-3.6855	-0.0020042	543.8027610749799	87.719	1.7688	88.166	87.389	89.158	0.44653					75	42	3	0	0	0	0.13779	1	10305	10305		85.909	7.6454	1	1406800	+		60810	21052	40623	40639	68900	68900					0.055616108390495356
VFPILFGFF	9	Unmodified	_VFPILFGFF_					0	0	0			REV__nc|ENSG00000164220|O00254-2|F2RL2	REV__nc|ENSG00000164220|O00254-2|F2RL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.80224609375	2	543.804771	1085.59499	-1.2897	-0.00070133	-2.549	-0.0013862	-3.8387	-0.0020875	543.8033834985146	87.811	1.8604	88.274	87.894	89.755	0.46312					85	45	3	0	0	0	0.13779	1	10357	10357		85.909	5.9699	1	1716100	+		60811	21052	40623	40639	68901	68901					0.055616108390495356
VFPILFGFF	9	Unmodified	_VFPILFGFF_					0	0	0			REV__nc|ENSG00000164220|O00254-2|F2RL2	REV__nc|ENSG00000164220|O00254-2|F2RL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	543.804771	1085.59499	0.12835	6.9799E-05	-4.0068	-0.0021789	-3.8784	-0.0021091	543.8025876587288	87.996	2.7003	88.197	87.198	89.899	0.20114	-0.028907	-0.00051111	NaN	85.909	114	63	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1171800	+		60812	21052	40623	40639							0.055616108390495356
VFPILFGFF	9	Unmodified	_VFPILFGFF_					0	0	0			REV__nc|ENSG00000164220|O00254-2|F2RL2	REV__nc|ENSG00000164220|O00254-2|F2RL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	543.804771	1085.59499	0.73297	0.00039859	-4.5922	-0.0024972	-3.8592	-0.0020987	543.8022700887282	88.126	2.7459	88.276	87.426	90.172	0.15054	0.050561	-0.0011478	NaN	85.909	110	64	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1053400	+		60813	21052	40623	40639							0.055616108390495356
VFPILFGFF	9	Unmodified	_VFPILFGFF_					0	0	0			REV__nc|ENSG00000164220|O00254-2|F2RL2	REV__nc|ENSG00000164220|O00254-2|F2RL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	543.804771	1085.59499	-1.4708	-0.00079981	-2.4205	-0.0013163	-3.8913	-0.0021161	543.8035052833651	88.046	3.0336	88.216	86.872	89.906	0.16923	-0.010039	0.0012141	NaN	85.909	115	70	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	991690	+		60814	21052	40623	40639							0.055616108390495356
VFPILFGFF	9	Unmodified	_VFPILFGFF_					0	0	0			REV__nc|ENSG00000164220|O00254-2|F2RL2	REV__nc|ENSG00000164220|O00254-2|F2RL2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	543.804771	1085.59499	-0.095009	-5.1666E-05	-3.5905	-0.0019525	-3.6855	-0.0020042	543.8027610749799	87.719	1.7688	88.166	87.389	89.158	0.44653	-0.059834	-5.8391E-05	NaN	85.909	75	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1406800	+		60815	21052	40623	40639							0.055616108390495356
VFPILFGFF	9	Unmodified	_VFPILFGFF_					0	0	0			REV__nc|ENSG00000164220|O00254-2|F2RL2	REV__nc|ENSG00000164220|O00254-2|F2RL2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	543.804771	1085.59499	-1.2897	-0.00070133	-2.549	-0.0013862	-3.8387	-0.0020875	543.8033834985146	87.811	1.8604	88.274	87.894	89.755	0.46312	0.04822	0.0010744	NaN	85.909	85	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1716100	+		60816	21052	40623	40639							0.055616108390495356
VFPLKIFVP	9	Unmodified	_VFPLKIFVP_					0	0	0		ENST00000340622.7_1_7:149170266-149170389:-|nuORF	ENST00000340622.7_1_7:149170266-149170389:-|nuORF	ENST00000340622.7_1_7:149170266-149170389:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3318481445312	2	530.333696	1058.65284	3.3405	0.0017716	1.907	0.0010113	5.2475	0.0027829	530.3347601479359	109.57	0.3297	109.54	109.38	109.71	-0.02906					30	16	2	0	0	0	0.20789	1	12136	12136		12.207	0	1	1216600			60817	10233	40624	40640	68902	68902					0.12585872764452688
VFPPHPRPRN	10	Unmodified	_VFPPHPRPRN_					0	0	0			REV__ENSG00000160838|ENST00000337428|LRRC71	REV__ENSG00000160838|ENST00000337428|LRRC71	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.8362426757812	2	608.838531	1215.66251	-0.43425	-0.00026439	-1.964	-0.0011958	-2.3982	-0.0014601	608.8372155374379	110.58	1.0111	110.52	110.29	111.3	-0.055084					101	32	4	0	0	0	0.81018	1	12077	12077		38.806	1.298	1	4475900	+		60818	20745	40625	40641	68903	68903					0.06330453822556592
VFPPLTQRTY	10	Unmodified	_VFPPLTQRTY_					0	0	0		ENST00000532758.5_1_8:145137633-145138586:+|nuORF;ENSG00000197858|ENST00000355091|GPAA1	ENST00000532758.5_1_8:145137633-145138586:+|nuORF	ENST00000532758.5_1_8:145137633-145138586:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3534545898438	2	611.334956	1220.65536	0.21519	0.00013156	-1.8936	-0.0011576	-1.6784	-0.0010261	611.8356511942819	97.015	0.12603	97.062	97.001	97.127	0.047798					4	2	2	0	0	0	0.37624	1	10308	10308		45.972	13.16	1	41118			60819	8206	40626	40642	68904	68904					0.05385676431478714
VFPPLTQRTY	10	Unmodified	_VFPPLTQRTY_					0	0	0		ENST00000532758.5_1_8:145137633-145138586:+|nuORF;ENSG00000197858|ENST00000355091|GPAA1	ENST00000532758.5_1_8:145137633-145138586:+|nuORF	ENST00000532758.5_1_8:145137633-145138586:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	611.334956	1220.65536	2.4992	0.0015278	-2.5115	-0.0015354	-0.012299	-7.5189E-06	611.331882835625	97.009	0.25986	96.953	96.714	96.974	-0.056381	-0.054669	-0.00025362	NaN	45.972	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27751			60820	8206	40626	40642							0.05385676431478714
VFPPVARGRPR	11	Unmodified	_VFPPVARGRPR_					0	0	0			REV__ENST00000463304.1_1_3:50363610-50365530:-|nuORF	REV__ENST00000463304.1_1_3:50363610-50365530:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3798217773438	2	626.375281	1250.73601	2.9096	0.0018225	3.1458	0.0019705	6.0554	0.003793	626.3771603031328	107.89	0.4325	107.86	107.51	107.94	-0.031487					32	10	4	0	0	0	0.6921	1	11927	11927		32.812	0.061884	1	11845000	+		60821	18043	40627	40643	68905	68905					0.12067002265030169
VFPREGTHTR	10	Unmodified	_VFPREGTHTR_					0	0	0			REV__nc|ENSG00000188227|Q6ZN11-3|ZNF793	REV__nc|ENSG00000188227|Q6ZN11-3|ZNF793	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.54876708984375	3	400.547511	1198.6207	0.18534	7.4239E-05	3.5613	0.0014265	3.7467	0.0015007	400.54880830476657	48.962	0.84209	49.867	49.45	50.292	0.90424					56	20	3	0	0	0	0.8608	1	4799	4799		31.634	1.3165	1	1822100	+		60822	22988	40628	40644	68906	68906					0.029338533433474367
VFPRENRHRRQ	11	Unmodified	_VFPRENRHRRQ_					0	0	0			REV__ENSG00000180532|ENST00000318203|ZSCAN4	REV__ENSG00000180532|ENST00000318203|ZSCAN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.9437561035156	3	498.943147	1493.80761	0.81029	0.00040429	-0.38082	-0.00019001	0.42947	0.00021428	498.9429898071896	50.142	0.77797	50.987	50.599	51.377	0.84501					71	18	5	0	0	0	0.75779	1	4952	4952		20.315	1.0523	1	7799100	+		60823	22401	40629	40645	68907	68907					0.08045889951563368
VFPRFMATT	9	Unmodified	_VFPRFMATT_					0	0	0			REV__ENSG00000137766|ENST00000260323|UNC13C	REV__ENSG00000137766|ENST00000260323|UNC13C	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.6817626953125	2	535.278595	1068.54264	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.333	1	70.468	69.968	70.968	0.13506								0	0	0	0.31472	1	6376	6376		25.45	6.0902	1		+		60824	19405	40630	40646	68908	68908					0.011107044337904881
VFPVVQKSW	9	Unmodified	_VFPVVQKSW_					0	0	0			REV__ENSG00000114127|ENST00000392981|XRN1	REV__ENSG00000114127|ENST00000392981|XRN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3057250976562	2	545.30821	1088.60187	0.05614	3.0614E-05	-1.5966	-0.00087065	-1.5405	-0.00084004	545.3072318973699	58.019	0.81956	58.573	58.228	59.047	0.55323					26	19	2	0	0	0	0.35373	1	6074	6074		60.972	4.2509	1	341880	+		60825	18034	40631	40647	68909	68909					0.06110923719620587
VFQDQIQQP	9	Unmodified	_VFQDQIQQP_					0	0	0		nc|ENSG00000141519|Q4G0X9-3|CCDC40;ENST00000574799.5_1_17:78022329-78073571:+|nuORF;nc|ENSG00000141519|Q4G0X9-2|CCDC40;ENSG00000141519|ENST00000397545|CCDC40;nc|ENSG00000141519|Q4G0X9-5|CCDC40;nc|ENSG00000141519|Q4G0X9-4|CCDC40	nc|ENSG00000141519|Q4G0X9-3|CCDC40	nc|ENSG00000141519|Q4G0X9-3|CCDC40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.7774658203125	2	551.780013	1101.54547	0.33143	0.00018288	-3.5503	-0.001959	-3.2189	-0.0017761	551.7776556243681	30.434	0.52094	30.387	30.099	30.62	-0.047064					28	12	3	0	0	0	0.69624	1	1666	1666		40.778	4.3314	1	89642			60826	4508	40632	40648	68910	68910					-0.0012374890770843194
VFQQKTARR	9	Unmodified	_VFQQKTARR_					0	0	0		nc|ENSG00000153064|Q8NDB2-3|BANK1;nc|ENSG00000153064|Q8NDB2-2|BANK1;ENSG00000153064|ENST00000322953|BANK1;nc|ENSG00000153064|Q8NDB2-4|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297119140625	2	567.330539	1132.64652	-0.54401	-0.00030863	-0.26969	-0.00015301	-0.81371	-0.00046164	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.78536	1	8797	8797		29.15	2.4566	1	4477200			60827	5212	40633	40649	68911	68911					0.08550747585650242
VFQQKTARR	9	Unmodified	_VFQQKTARR_					0	0	0		nc|ENSG00000153064|Q8NDB2-3|BANK1;nc|ENSG00000153064|Q8NDB2-2|BANK1;ENSG00000153064|ENST00000322953|BANK1;nc|ENSG00000153064|Q8NDB2-4|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	nc|ENSG00000153064|Q8NDB2-3|BANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.32958984375	2	567.330539	1132.64652	1.203	0.00068247	-1.0748	-0.00060977	0.12815	7.2702E-05	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.76764	1	10574	10574		34.173	3.6689	1	4990000			60828	5212	40633	40649	68912	68912					0.08550747585650242
VFQYTTGYVF	10	Unmodified	_VFQYTTGYVF_					0	0	0			REV__ENSG00000087301|ENST00000281741|TXNDC16	REV__ENSG00000087301|ENST00000281741|TXNDC16	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8795776367188	2	612.800414	1223.58628	0.91261	0.00055925	1.1822	0.00072445	2.0948	0.0012837	612.8014889864234	104.11	0.69937	104.23	103.82	104.52	0.11684					19	16	2	0	0	0	0.37624	1	11056	11056		45.952	0	1	75783	+		60829	16931	40634	40650	68913	68913					-0.01657407588118076
VFRDISPVL	9	Unmodified	_VFRDISPVL_					0	0	0		nc|ENSG00000198931|P07741-2|APRT;ENST00000564858.1_1_16:88877682-88878307:-|nuORF;ENSG00000198931|ENST00000378364|APRT	nc|ENSG00000198931|P07741-2|APRT	nc|ENSG00000198931|P07741-2|APRT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.305667	1044.59678	-1.5386	-0.00080516	-2.5522	-0.0013356	-4.0908	-0.0021407	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.76764	1	8835	8835		34.173	7.4796	1	12189000			60830	8373	40635	40651	68914	68914					0.0762661985700106
VFRIFFHKIF	10	Unmodified	_VFRIFFHKIF_					0	0	0		ENSG00000168229|ENST00000306051|PTGDR	ENSG00000168229|ENST00000306051|PTGDR	ENSG00000168229|ENST00000306051|PTGDR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.9325866699219	3	451.932526	1352.77575	-1.2099	-0.00054677	1.5656	0.00070755	0.35576	0.00016078	451.9331762816347	100.44	2.751	100.65	99.522	102.27	0.21511					194	65	4	0	0	0	0.85834	1	10618	10618		22.58	5.4129	1	1176100			60831	6383	40636	40652	68915	68915					0.11347129215732821
VFRKIFLTK	9	Unmodified	_VFRKIFLTK_					0	0	0			REV__ENST00000608790.5_1_13:52793747-52803539:-|nuORF	REV__ENST00000608790.5_1_13:52793747-52803539:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3687744140625	2	576.368601	1150.72265	0.4156	0.00023954	0.70206	0.00040464	1.1177	0.00064418	576.3688772331659	49.515	1.7464	49.558	48.71	50.457	0.04224					101	42	3	0	0	0	0.7932	1	3868	3868		15.642	0.77694	1	371290	+		60832	29379	40637	40653	68916	68916					0.153317514330638
VFRLVRGYFR	10	Unmodified	_VFRLVRGYFR_					0	0	0		ENST00000199389.10_1_7:6098783-6098849:-|nuORF	ENST00000199389.10_1_7:6098783-6098849:-|nuORF	ENST00000199389.10_1_7:6098783-6098849:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2575988769531	3	438.259413	1311.75641	0.25686	0.00011257	-3.8997	-0.0017091	-3.6428	-0.0015965	438.25763532850164	29.855	0.59691	29.866	29.546	30.143	0.01123					91	29	5	0	0	0	0.83456	1	1297	1297		37.508	7.9574	1	489580			60833	9092	40638	40654	68917	68917					0.11300172924825347
VFRMKYKKLFR	11	Unmodified	_VFRMKYKKLFR_					0	0	0		ENST00000367478.8_1_1:186314749-186314800:-|nuORF	ENST00000367478.8_1_1:186314749-186314800:-|nuORF	ENST00000367478.8_1_1:186314749-186314800:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.9740905761719	3	505.970875	1514.89079	2.9404	0.0014878	3.891	0.0019687	6.8314	0.0034565	505.97287794220534	112.87	7.7849	112.84	112.19	119.97	-0.024811					550	277	2	0	0	0	0.76892	1	12406	12406		17.833	4.8757	1	2261500			60834	10546	40639	40655	68918	68918					0.15394490355220114
VFRPVYENT	9	Unmodified	_VFRPVYENT_					0	0	0			REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	562.79052734375	2	562.790381	1123.56621	-1.163	-0.00065455	1.1695	0.00065816	0.006413	3.6092E-06	562.7911139498766	49.976	0.60409	49.976	49.616	50.22	0					23	13	2	0	0	0	0.69624	1	3957	3957		40.778	3.6191	1	104650	+		60835	23096	40640	40656	68919	68919					0.009368414719347129
VFRPVYENT	9	Unmodified	_VFRPVYENT_					0	0	0			REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	562.790381	1123.56621	0.54011	0.00030397	-0.78141	-0.00043977	-0.2413	-0.0001358	562.7901262781373	49.9	0.39931	49.903	49.677	50.077	0.0035934	-0.037192	-0.0015417	NaN	40.778	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27657	+		60836	23096	40640	40656							0.009368414719347129
VFRPVYENT	9	Unmodified	_VFRPVYENT_					0	0	0			REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	562.790381	1123.56621	0.33792	0.00019018	-0.33081	-0.00018617	0.0071175	4.0057E-06	562.7902968610847	50.008	0.43438	50.038	49.751	50.185	0.029629	0.097332	-0.0010345	NaN	40.778	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64863	+		60837	23096	40640	40656							0.009368414719347129
VFRPVYENT	9	Unmodified	_VFRPVYENT_					0	0	0			REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	REV__nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	562.790381	1123.56621	-0.059697	-3.3597E-05	-1.1173	-0.00062879	-1.177	-0.00066239	562.7903659029341	49.937	0.42796	49.844	49.678	50.106	-0.092484	-0.096074	-0.0019197	NaN	40.778	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38820	+		60838	23096	40640	40656							0.009368414719347129
VFRRDVAEA	9	Unmodified	_VFRRDVAEA_					0	0	0		ENSG00000204764|ENST00000523189|RANBP17;ENST00000522533.5_1_5:170395310-170725859:+|nuORF;ENST00000519949.5_1_5:170395310-170725859:+|nuORF	ENSG00000204764|ENST00000523189|RANBP17	ENSG00000204764|ENST00000523189|RANBP17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7867431640625	2	531.788173	1061.56179	-1.8857	-0.0010028	-0.22166	-0.00011788	-2.1074	-0.0011207	531.7879209476595	42.69	0.7375	43.388	43.132	43.869	0.69754					41	17	4	0	0	0	0.39367	1	3856	3856		58.23	6.7022	1	3147700			60839	8486	40641	40657	68920	68920					0.03347377049044553
VFRRRLGQ	8	Unmodified	_VFRRRLGQ_					0	0	0			REV__ENST00000606893.5_1_6:110501354-110532119:+|nuORF	REV__ENST00000606893.5_1_6:110501354-110532119:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3125	2	516.314692	1030.61483	-1.5618	-0.0008064	0.77244	0.00039882	-0.78941	-0.00040758	516.315128223729	103.33	1.0546	103.45	103.07	104.12	0.11494					63	26	3	0	0	0	0.89457	1	10927	10927		37.028	8.7742	1	813320	+		60840	29376	40642	40658	68921	68921					0.10074799622361752
VFSEKPEAVFV	11	Unmodified	_VFSEKPEAVFV_					0	0	0			REV__ENSG00000125414|ENST00000245503|MYH2	REV__ENSG00000125414|ENST00000245503|MYH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3795166015625	2	626.334621	1250.65469	1.3705	0.00085841	2.8523	0.0017865	4.2228	0.0026449	626.336373798551	105.81	0.19658	105.97	105.81	106	0.15924					6	4	2	0	0	0	0.17415	1	11280	11280		41.427	12.257	1	75035	+		60841	18642	40643	40659	68922	68922					0.039388369917332966
VFSKNVLSSLW	11	Unmodified	_VFSKNVLSSLW_					0	0	0		ENST00000479054.5_1_3:52526520-52526670:+|nuORF	ENST00000479054.5_1_3:52526520-52526670:+|nuORF	ENST00000479054.5_1_3:52526520-52526670:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3590087890625	2	640.355888	1278.69722	1.5852	0.0010151	2.9459	0.0018864	4.5311	0.0029015	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.51007	1	10409	10409		51.193	5.2204	1	616450			60842	12401	40644	40660	68923	68923					0.06902232120000917
VFSKQQKL	8	Unmodified	_VFSKQQKL_					0	0	0			REV__nc|ENSG00000182621|Q9NQ66-2|PLCB1	REV__nc|ENSG00000182621|Q9NQ66-2|PLCB1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.28900146484375	2	489.292559	976.570566	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.748	1	16.666	16.166	17.166	-0.0821								0	0	0	0.29568	1	169	169		35.201	1.6851	1		+		60843	22537	40645	40661	68924	68924					0.0813435068552053
VFSLALAL	8	Unmodified	_VFSLALAL_					0	0	0		ENST00000389574.7_3_7:913202-913373:+|nuORF;ENST00000261211.7_1_12:96794037-96794286:-|nuORF	ENST00000389574.7_3_7:913202-913373:+|nuORF	ENST00000389574.7_3_7:913202-913373:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2584228515625	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.82464	1	512	512		21.702	1.7056	1	817900			60844	9398	40646	40662	68925	68925					0.08288775879520927
VFSLPNDY	8	Unmodified	_VFSLPNDY_					0	0	0			REV__nc|ENSG00000205213|Q9BXB1-2|LGR4	REV__nc|ENSG00000205213|Q9BXB1-2|LGR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	477.7300720214844	2	477.732	953.449448	-0.28514	-0.00013622	-3.2889	-0.0015712	-3.574	-0.0017074	477.7301516578541	22.924	0.44676	22.872	22.657	23.104	-0.052114					17	13	2	0	0	0	0.91977	1	774	774		45.952	7.1458	1	27379	+		60845	23544	40647	40663	68926	68926					-0.02913896747816125
VFSMIIMC	8	Carbamidomethyl (C)	_VFSMIIMC(Carbamidomethyl (C))_	VFSMIIMC(1)		VFSMIIMC(55)		0	1	0		nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A;ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A	nc|ENSG00000196876|Q9UQD0-4|SCN8A	nc|ENSG00000196876|Q9UQD0-4|SCN8A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7353515625	2	500.73686	999.459166	0.18475	9.2513E-05	-4.2636	-0.0021349	-4.0788	-0.0020424	500.7345120074977	80.794	0.65495	81.321	80.992	81.647	0.52677					36	15	3	0	0	0	0.94132	1	9320	9320		54.765	8.8127	1	557520			60846	8110	40648	40664	68927	68927	98				-0.04058491329919889
VFSSLIPL	8	Unmodified	_VFSSLIPL_					0	0	0		ENST00000549537.6_2_12:112371794-112450827:-|nuORF;ENST00000552801.6_1_12:112371805-112450827:-|nuORF;nc|ENSG00000198270|Q8NCL8|TMEM116;ENST00000548283.6_1_12:112374453-112450904:-|nuORF;nc|ENSG00000198270|Q8NCL8-3|TMEM116;ENSG00000198270|ENST00000552374|TMEM116	ENST00000549537.6_2_12:112371794-112450827:-|nuORF	ENST00000549537.6_2_12:112371794-112450827:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26312255859375	2	438.265479	874.516405	-1.0936	-0.00047928	-3.4121	-0.0014954	-4.5057	-0.0019747	438.26391893338854	37.264	3.7189	37.21	36.961	40.68	-0.053558					205	86	5	0	0	0	0.81548	1	2890	2890		20.482	0	1	2862500			60847	8261	40649	40665	68928	68928					0.0741275853396246
VFSVSCPGLH	10	Unmodified	_VFSVSCPGLH_					0	0	0			REV__ENST00000305883.5_1_2:10192656-10192860:+|nuORF	REV__ENST00000305883.5_1_2:10192656-10192860:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.2593383789062	2	523.260402	1044.50625	0.5992	0.00031354	-0.89889	-0.00047035	-0.29969	-0.00015682	523.7604804784513	60.52	0.95633	60.487	59.981	60.938	-0.032513					74	26	4	0	0	0	0.84112	1	5703	5703		37.159	2.9866	1	391710	+		60848	24824	40650	40666	68929	68929					-0.014221724629123855
VFTHVLYY	8	Unmodified	_VFTHVLYY_					0	0	0		ENST00000464431.1_1_3:127396482-127396803:+|nuORF;nc|ENSG00000114626|Q969K4-2|ABTB1;nc|ENSG00000114626|Q969K4-4|ABTB1;nc|ENSG00000114626|Q969K4-3|ABTB1;ENSG00000114626|ENST00000232744|ABTB1	ENST00000464431.1_1_3:127396482-127396803:+|nuORF	ENST00000464431.1_1_3:127396482-127396803:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.2705078125	2	521.273835	1040.53312	0.22719	0.00011843	0.6011	0.00031334	0.82829	0.00043176	521.2728451629795	49.3	0.37081	49.76	49.582	49.952	0.45983					13	8	2	0	0	0	0.4196	1	4819	4819		28.254	0	1	230420			60849	2781	40651	40667	68930	68930					0.014472594198878141
VFTVSLWLYLL	11	Unmodified	_VFTVSLWLYLL_					0	0	0		nc|ENSG00000091490|Q68CR1-3|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;ENSG00000091490|ENST00000399878|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9325866699219	3	451.93208	1352.77441	2.5866	0.001169	-1.2802	-0.00057854	1.3064	0.00059042	451.9314578077931	100.66	2.6688	100.61	99.781	102.45	-0.052109					175	62	4	0	0	0	0.75906	1	11010	11010		20.03	3.5006	1	1152500			60850	1678	40652	40668	68931	68931					0.11213450336344977
VFVCLFLLP	9	Unmodified	_VFVCLFLLP_					0	0	0		ENSG00000116133|ENST00000371269|DHCR24	ENSG00000116133|ENST00000371269|DHCR24	ENSG00000116133|ENST00000371269|DHCR24	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.9801635742188	2	525.806457	1049.59836	3.6193	0.001903	-3.0969	-0.0016284	0.52235	0.00027466	525.8054186872258	103.88	2.0182	104.15	103.75	105.77	0.26524					65	48	3	0	0	0	0.20789	1	12804	12804		21.702	0	1	236970			60851	2901	40653	40669	68932	68932					0.07554537621376767
VFVDLLSA	8	Unmodified	_VFVDLLSA_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.24591064453125	2	432.247286	862.48002	-1.0325	-0.00044629	0.17629	7.6202E-05	-0.8562	-0.00037009	432.2475175582521	98.287	1.1701	98.287	97.806	98.976	0					69	28	4	0	0	0	0.86791	1	9859	9859		28.254	0	1	659880	+		60852	17157	40654	40670	68933	68933					0.04327881637243536
VFVGEPKT	8	Unmodified	_VFVGEPKT_					0	0	0		ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	ENSG00000205277|ENST00000536621|MUC12	ENSG00000205277|ENST00000536621|MUC12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2615661621094	2	438.744911	875.475269	-2.494	-0.0010942	1.5388	0.00067514	-0.95519	-0.00041909	438.7457748119272	40.732	0.58491	41.125	40.901	41.486	0.39209					18	16	2	0	0	0	0.4196	1	3505	3505		49.442	5.3247	1	1057000			60853	8520	40655	40671	68934	68934					0.03254997494491363
VFVGEPKT	8	Unmodified	_VFVGEPKT_					0	0	0		ENSG00000205277|ENST00000536621|MUC12;nc|ENSG00000205277|Q9UKN1|MUC12	ENSG00000205277|ENST00000536621|MUC12	ENSG00000205277|ENST00000536621|MUC12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2635803222656	2	438.744911	875.475269	0.28705	0.00012594	4.3168	0.001894	4.6039	0.0020199	438.7468016057776	34.847	0.42445	35.057	34.897	35.321	0.21002					13	10	2	0	0	0	0.4196	1	2605	2605		49.442	5.3247	1	223890			60854	8520	40655	40671	68935	68935					0.03254997494491363
VFVGLISSAVL	11	Unmodified	_VFVGLISSAVL_					0	0	0			REV__nc|ENSG00000283586|P0CG01|GKN3P	REV__nc|ENSG00000283586|P0CG01|GKN3P	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.8338012695312	2	552.8368	1103.65905	-0.71064	-0.00039287	-4.0102	-0.002217	-4.7209	-0.0026099	552.8343973070275	84.083	2.0319	84.083	83.586	85.618	0					122	47	3	0	0	0	0.53495	3	7907	7907;7919;8072		49.442	10.635	1	300740	+		60855	30276	40656	40672	68936;68937;68938	68936					0.1113634620535322
VFVGLISSAVL	11	Unmodified	_VFVGLISSAVL_					0	0	0			REV__nc|ENSG00000283586|P0CG01|GKN3P	REV__nc|ENSG00000283586|P0CG01|GKN3P	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	552.8368	1103.65905	1.3128	0.00072578	-6.6185	-0.003659	-5.3057	-0.0029332	552.8332068317654	83.947	2.0849	83.878	83.283	85.368	-0.069313	0.049893	-0.0018554	NaN	49.442	82	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121860	+		60856	30276	40656	40672							0.1113634620535322
VFVGLISSAVL	11	Unmodified	_VFVGLISSAVL_					0	0	0			REV__nc|ENSG00000283586|P0CG01|GKN3P	REV__nc|ENSG00000283586|P0CG01|GKN3P	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	552.8368	1103.65905	-0.81968	-0.00045315	-4.4023	-0.0024337	-5.222	-0.0028869	552.8343611690157	83.255	1.3665	83.686	83.334	84.701	0.43108	-0.14163	0.00059501	NaN	49.442	47	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	187800	+		60857	30276	40656	40672							0.1113634620535322
VFVGLISSAVL	11	Unmodified	_VFVGLISSAVL_					0	0	0			REV__nc|ENSG00000283586|P0CG01|GKN3P	REV__nc|ENSG00000283586|P0CG01|GKN3P	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	552.8368	1103.65905	0.0080664	4.4594E-06	-5.1028	-0.002821	-5.0947	-0.0028166	552.8339923747285	83.228	0.78914	83.683	83.317	84.106	0.45555	-0.14468	-0.00017953	NaN	49.442	41	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	194380	+		60858	30276	40656	40672							0.1113634620535322
VFVIYKFKR	9	Unmodified	_VFVIYKFKR_					0	0	0		nc|ENSG00000108018|Q8WY21-4|SORCS1;ENSG00000108018|ENST00000263054|SORCS1;nc|ENSG00000108018|Q8WY21-3|SORCS1;nc|ENSG00000108018|Q8WY21-2|SORCS1;ENST00000473866.1_1_10:108338843-108339191:-|nuORF	nc|ENSG00000108018|Q8WY21-4|SORCS1	nc|ENSG00000108018|Q8WY21-4|SORCS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.580322265625	3	400.581493	1198.72265	0.73385	0.00029397	-3.2209	-0.0012902	-2.487	-0.00099626	400.58015542087406	111.26	0.52737	111.33	110.97	111.5	0.069542					32	20	2	0	0	0	0.78983	1	11973	11973		27.882	7.0451	1	556140			60859	2387	40657	40673	68939	68939					0.1312375143306781
VFVLVWLI	8	Unmodified	_VFVLVWLI_					0	0	0			REV__ENST00000526991.2_1_18:11852584-11852803:+|nuORF	REV__ENST00000526991.2_1_18:11852584-11852803:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.30078125	2	494.815139	987.615725	-1.6319	-0.00080747	1.7165	0.00084937	0.08469	4.1906E-05	494.8160182523935	97.588	0.16866	97.79	97.685	97.854	0.20207					5	3	2	0	0	0	0.4196	1	10046	10046		10.185	3.4492	1	50518	+		60860	28221	40658	40674	68940	68940					0.12142201218705395
VFVTGSILGVK	11	Unmodified	_VFVTGSILGVK_					0	0	0			REV__ENSG00000152954|ENST00000378491|NRSN1	REV__ENSG00000152954|ENST00000378491|NRSN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3385009765625	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.72106	1	12753	12753		28.081	3.5623	1	4071000	+		60861	20325	40659	40675	68941	68941					0.11535748579603933
VFVVAGAH	8	Unmodified	_VFVVAGAH_					0	0	0		ENSG00000275591|ENST00000618742|XKR5	ENSG00000275591|ENST00000618742|XKR5	ENSG00000275591|ENST00000618742|XKR5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.2258605957031	2	400.226688	798.438824	-1.9018	-0.00076116	0.025228	1.0097E-05	-1.8766	-0.00075106	400.22655653180504	40.442	1.8386	40.449	40.071	41.91	0.0065041					122	59	3	0	0	0	0.84567	1	2544	2544		24.504	0	1	995180			60862	9005	40660	40676	68942	68942					0.0315416538842328
VFVVAGAH	8	Unmodified	_VFVVAGAH_					0	0	0		ENSG00000275591|ENST00000618742|XKR5	ENSG00000275591|ENST00000618742|XKR5	ENSG00000275591|ENST00000618742|XKR5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.2281494140625	2	400.226688	798.438824	1.1221	0.00044908	1.5017	0.000601	2.6237	0.0010501	400.22744040827075	52.487	1.5647	52.911	52.149	53.713	0.42348					74	37	3	0	0	0	0.84567	1	5266	5266		24.504	7.799	1	9430900			60863	9005	40660	40676	68943	68943					0.0315416538842328
VFVVAGAH	8	Unmodified	_VFVVAGAH_					0	0	0		ENSG00000275591|ENST00000618742|XKR5	ENSG00000275591|ENST00000618742|XKR5	ENSG00000275591|ENST00000618742|XKR5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.22784423828125	2	400.226688	798.438824	-0.058285	-2.3327E-05	2.876	0.0011511	2.8177	0.0011277	400.2280059844884	52.237	1.9334	52.905	52.23	54.164	0.66729					76	46	3	0	0	0	0.80127	3	5281	5220;5281;5308		33.493	0	1	9506900			60864	9005	40660	40676	68944;68945;68946	68945					0.0315416538842328
VFWGHGPST	9	Unmodified	_VFWGHGPST_					0	0	0			REV__ENST00000460419.1_1_3:182971715-182987339:+|nuORF	REV__ENST00000460419.1_1_3:182971715-182987339:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7362060546875	2	494.237784	986.461016	-1.9276	-0.00095267	-2.5008	-0.001236	-4.4284	-0.0021887	494.2363613528478	22.226	0.48292	22.226	21.986	22.469	0					28	22	2	0	0	0	0.76402	1	651	651		35.201	1.0282	1	28620	+		60865	27003	40661	40677	68947	68947					-0.03275654933793248
VFWLLGII	8	Unmodified	_VFWLLGII_					0	0	0		nc|ENSG00000005483|Q8IZD2-5|KMT2E	nc|ENSG00000005483|Q8IZD2-5|KMT2E	nc|ENSG00000005483|Q8IZD2-5|KMT2E	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.2828063964844	2	480.799489	959.584425	0.78379	0.00037685	2.3768	0.0011428	3.1606	0.0015196	480.8005081001793	102.2	1.0534	102.34	101.85	102.9	0.13523					36	25	2	0	0	0	0.4196	1	10825	10825		16.705	6.5202	1	124010			60866	14732	40662	40678	68948	68948					0.1030162818460667
VFYRDKVYAFI	11	Unmodified	_VFYRDKVYAFI_					0	0	0			REV__ENSG00000198604|ENST00000360310|BAZ1A	REV__ENSG00000198604|ENST00000360310|BAZ1A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.283447265625	3	474.258967	1419.75507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.61	1	18.133	17.633	18.633	-0.47694								0	0	0	0.56276	1	410	410		23.378	1.5975	1		+		60867	23344	40663	40679	68949	68949					0.0619849404542947
VGAAAAAG	8	Unmodified	_VGAAAAAG_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	587.3270874023438	1	587.314751	586.307475	-0.74951	-0.0004402	-1.5838	-0.00093018	-2.3333	-0.0013704	587.313730933172	71.535	0.67044	71.612	71.388	72.058	0.076225					48	28	2	0	0	0	0.4196	1	6468	6468		5.0869	0	1	198360	+		60868	18883	40664	40680	68950	68950					-0.002226449794875407
VGAAAAAG	8	Unmodified	_VGAAAAAG_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		1	587.314751	586.307475	0.73955	0.00043435	-3.0319	-0.0017807	-2.2924	-0.0013463	587.3129038627109	71.401	0.54865	71.534	71.28	71.829	0.13356	-0.035765	-0.00033455	NaN	5.0869	39	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	189390	+		60869	18883	40664	40680							-0.002226449794875407
VGAAAAAG	8	Unmodified	_VGAAAAAG_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		1	587.314751	586.307475	0.62291	0.00036584	-3.0429	-0.0017872	-2.42	-0.0014213	587.3129277482599	71.434	0.47314	71.564	71.252	71.725	0.1301	-0.005802	-0.000341	NaN	5.0869	37	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185300	+		60870	18883	40664	40680							-0.002226449794875407
VGAALLKKV	9	Unmodified	_VGAALLKKV_					0	0	0			REV__nc|ENSG00000140553|Q9H3U1-2|UNC45A	REV__nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.3145446777344	2	449.807845	897.601138	-0.0049203	-2.2132E-06	-2.4977	-0.0011235	-2.5026	-0.0011257	449.80676496829915	21.997	0.18384	21.386	21.332	21.516	-0.6107					6	4	2	0	0	0	0.20789	1	863	863		26.796	1.3459	1	11896	+		60871	19630	40665	40681	68951	68951					0.1482412907056414
VGAELVRRLVP	11	Unmodified	_VGAELVRRLVP_					0	0	0			REV__ENST00000253099.10_2_19:10362665-10362749:+|nuORF	REV__ENST00000253099.10_2_19:10362665-10362749:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5748291015625	3	403.587307	1207.74009	0.56182	0.00022674	-3.1689	-0.0012789	-2.607	-0.0010522	403.58494157446034	81.708	0.26266	81.852	81.675	81.938	0.14461					7	5	2	0	0	0	0.17368	1	7847	7847		22.562	0	1	16387	+		60872	24302	40666	40682	68952	68952					0.14453046968060335
VGAGCYIRDYQ	11	Unmodified	_VGAGCYIRDYQ_					0	0	0			REV__ENSG00000168300|ENST00000522514|PCMTD1	REV__ENSG00000168300|ENST00000522514|PCMTD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2254333496094	3	415.529129	1243.56556	0.31187	0.00012959	3.4476	0.0014326	3.7595	0.0015622	415.5306343087529	27.169	0.44439	26.993	26.837	27.281	-0.17559					14	9	2	0	0	0	0.1753	1	1529	1529		18.531	2.6104	1	74741	+		60873	21476	40667	40683	68953	68953					-0.04648321239415054
VGAGCYIRDYQ	11	Unmodified	_VGAGCYIRDYQ_					0	0	0			REV__ENSG00000168300|ENST00000522514|PCMTD1	REV__ENSG00000168300|ENST00000522514|PCMTD1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	415.529129	1243.56556	2.7875	0.0011583	-0.31667	-0.00013159	2.4708	0.0010267	415.5293817396907	26.697	0.24069	26.67	26.508	26.749	-0.027706	-0.15765	-0.0033264	NaN	24.232	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6618.4	+		60874	21476	40667	40683							-0.04648321239415054
VGAGGGGG	8	Unmodified	_VGAGGGGG_					0	0	0		nc|ENSG00000163618|Q9ULU8-5|CADPS;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000162367|P17542-3|TAL1;nc|ENSG00000162367|P17542-2|TAL1;ENSG00000162367|ENST00000691006|TAL1;nc|ENSG00000163618|Q9ULU8-2|CADPS;ENSG00000163618|ENST00000383710|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS	nc|ENSG00000163618|Q9ULU8-5|CADPS;nc|ENSG00000163618|Q9ULU8-2|CADPS;REV__ENSG00000167680|ENST00000586582|SEMA6B	nc|ENSG00000163618|Q9ULU8-5|CADPS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.7822875976562	1	531.252151	530.244875	0.66113	0.00035123	-1.1544	-0.00061326	-0.49324	-0.00026203	531.249164507853	28.99	0.21649	28.817	28.717	28.933	-0.17336					6	4	2	0	0	0	0.4196	1	1819	1819		1.619	0	1	20588			60875	15050;5837;21415	40668	40684	68954	68954					-0.03903791047662253
VGAGIVAVK	9	Unmodified	_VGAGIVAVK_					0	0	0			REV__ENST00000209929.9_1_1:171154426-171178089:+|nuORF;REV__ENSG00000076258|ENST00000367749|FMO4	REV__ENST00000209929.9_1_1:171154426-171178089:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.2244873046875	2	407.263271	812.511988	-0.075309	-3.0671E-05	4.1732	0.0016996	4.0979	0.0016689	407.2648701640461	37.861	0.69598	38.384	38.174	38.87	0.52235					41	17	3	0	0	0	0.20789	1	3147	3147		19.36	0	1	1064200	+		60876	17048;16724	40669	40685	68955	68955					0.09823294111038194
VGALGHLAAA	10	Unmodified	_VGALGHLAAA_					0	0	0		ENSG00000144712|ENST00000456430|CAND2;nc|ENSG00000144712|O75155-2|CAND2	ENSG00000144712|ENST00000456430|CAND2	ENSG00000144712|ENST00000456430|CAND2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.255615234375	2	440.255977	878.497401	-0.8618	-0.00037941	-0.60853	-0.00026791	-1.4703	-0.00064732	440.2555982991601	63.688	1.6193	64.075	63.574	65.193	0.38681					98	37	4	0	0	0	0.85108	1	6867	6867		19.36	1.995	1	1365500			60877	4727	40670	40686	68956	68956					0.05329221962892916
VGALKVLL	8	Unmodified	_VGALKVLL_					0	0	0			REV__nc|nan|Q6P1S2-2|C3orf33	REV__nc|nan|Q6P1S2-2|C3orf33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78533935546875	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.81724	2	1296	1285;1296		28.254	6.5519	1	1410200	+		60878	22025	40671	40687	68957;68958	68958					0.13981055150509292
VGALLVKL	8	Unmodified	_VGALLVKL_					0	0	0			REV__ENSG00000141337|ENST00000621439|ARSG	REV__ENSG00000141337|ENST00000621439|ARSG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7843933105469	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.85228	1	1309	1309		10.185	0	1	1410200	+		60879	19673	40672	40688	68959	68959					0.13981055150509292
VGALLVKL	8	Unmodified	_VGALLVKL_					0	0	0			REV__ENSG00000141337|ENST00000621439|ARSG	REV__ENSG00000141337|ENST00000621439|ARSG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7853088378906	2	406.783839	811.553125	0.34779	0.00014148	3.2583	0.0013254	3.6061	0.0014669	406.7850428339316	31.533	1.6322	31.64	30.856	32.488	0.10707					116	37	4	0	0	0	0.82464	3	2222	2222;2234;2247		29.842	6.8048	1	5012000	+		60880	19673	40672	40688	68960;68961;68962	68960					0.13981055150509292
VGALMLLSH	9	Unmodified	_VGALMLLSH_					0	0	0			REV__ENSG00000168754|ENST00000490605|FAM178B	REV__ENSG00000168754|ENST00000490605|FAM178B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7682800292969	2	470.767863	939.521173	-0.65479	-0.00030825	3.1952	0.0015042	2.5404	0.001196	470.7692226833795	80.078	1.5697	80.605	79.423	80.992	0.52676					81	36	3	0	0	0	0.69914	1	9104	9104		40.573	2.7611	1	1102700	+		60881	21515	40673	40689	68963	68963					0.04899319405069491
VGALRALGV	9	Unmodified	_VGALRALGV_					0	0	0		CON__ENSEMBL:ENSBTAP00000018574	CON__ENSEMBL:ENSBTAP00000018574	CON__ENSEMBL:ENSBTAP00000018574	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.26153564453125	2	428.27417	854.533787	-0.93992	-0.00040254	-3.8396	-0.0016444	-4.7795	-0.0020469	428.27242510289625	90.823	0.5713	91.294	91.202	91.773	0.47068					16	13	2	0	0	0	0.20789	1	10869	10869		24.203	0	1	224680		+	60882	566	40674	40690	68964	68964					0.1007009885960315
VGALSECF	8	Unmodified	_VGALSECF_					0	0	0			REV__ENST00000597095.5_1_19:19101856-19102289:-|nuORF	REV__ENST00000597095.5_1_19:19101856-19102289:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1942443847656	2	413.194196	824.37384	0.80605	0.00033306	-2.5244	-0.0010431	-1.7183	-0.00071	413.1932379055747	78.047	2.9824	78.452	77.977	80.959	0.4053					181	70	5	0	0	0	0.88915	1	9015	9015		35.201	6.0512	1	5554900	+		60883	29261	40675	40691	68965	68965					-0.0453719719973833
VGALWGPAL	9	Unmodified	_VGALWGPAL_					0	0	0		ENST00000275605.7_1_7:56119184-56119283:-|nuORF	ENST00000275605.7_1_7:56119184-56119283:-|nuORF	ENST00000275605.7_1_7:56119184-56119283:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2535400390625	2	442.255446	882.496338	0.22498	9.9497E-05	-4.2729	-0.0018897	-4.0479	-0.0017902	442.2533904808694	22.229	0.65748	21.619	21.332	21.99	-0.6107					32	16	3	0	0	0	0.72098	1	883	883		39.021	1.8624	1	199350			60884	9597	40676	40692	68966	68966					0.05039007593984479
VGALWGPAL	9	Unmodified	_VGALWGPAL_					0	0	0		ENST00000275605.7_1_7:56119184-56119283:-|nuORF	ENST00000275605.7_1_7:56119184-56119283:-|nuORF	ENST00000275605.7_1_7:56119184-56119283:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	442.255446	882.496338	0.31817	0.00014071	-4.4619	-0.0019733	-4.1437	-0.0018326	442.25333738575694	22.059	0.66564	21.616	21.28	21.946	-0.44324	-0.0015393	-6.0252E-05	NaN	39.021	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141350			60885	9597	40676	40692							0.05039007593984479
VGANPKVR	8	Unmodified	_VGANPKVR_					0	0	0		nc|ENSG00000142186|Q96KG9-6|SCYL1;nc|ENSG00000142186|Q96KG9-4|SCYL1;ENSG00000142186|ENST00000270176|SCYL1;nc|ENSG00000142186|Q96KG9-5|SCYL1;nc|ENSG00000142186|Q96KG9-3|SCYL1;nc|ENSG00000142186|Q96KG9-2|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.7546081542969	2	420.756144	839.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.329	1	20.886	20.386	21.386	-0.44324								0	0	0	0.29498	1	761	761		26.796	0	1				60886	14969	40677	40693	68967	68967					0.07156641682752252
VGANPKVR	8	Unmodified	_VGANPKVR_					0	0	0		nc|ENSG00000142186|Q96KG9-6|SCYL1;nc|ENSG00000142186|Q96KG9-4|SCYL1;ENSG00000142186|ENST00000270176|SCYL1;nc|ENSG00000142186|Q96KG9-5|SCYL1;nc|ENSG00000142186|Q96KG9-3|SCYL1;nc|ENSG00000142186|Q96KG9-2|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.755126953125	2	420.756144	839.497735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.07	1	21.627	21.127	22.127	-0.44324								0	0	0	0.29694	1	858	858		37.028	6.5248	1				60887	14969	40677	40693	68968	68968					0.07156641682752252
VGANPKVR	8	Unmodified	_VGANPKVR_					0	0	0		nc|ENSG00000142186|Q96KG9-6|SCYL1;nc|ENSG00000142186|Q96KG9-4|SCYL1;ENSG00000142186|ENST00000270176|SCYL1;nc|ENSG00000142186|Q96KG9-5|SCYL1;nc|ENSG00000142186|Q96KG9-3|SCYL1;nc|ENSG00000142186|Q96KG9-2|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.7561950683594	2	420.756144	839.497735	0.13817	5.8134E-05	-1.7152	-0.00072168	-1.577	-0.00066355	420.75535126534055	20.58	0.77453	19.95	19.718	20.493	-0.6296					25	18	2	0	0	0	0.90465	1	683	683		40.573	3.4135	1	48436			60888	14969	40677	40693	68969	68969					0.07156641682752252
VGANPKVR	8	Unmodified	_VGANPKVR_					0	0	0		nc|ENSG00000142186|Q96KG9-6|SCYL1;nc|ENSG00000142186|Q96KG9-4|SCYL1;ENSG00000142186|ENST00000270176|SCYL1;nc|ENSG00000142186|Q96KG9-5|SCYL1;nc|ENSG00000142186|Q96KG9-3|SCYL1;nc|ENSG00000142186|Q96KG9-2|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	nc|ENSG00000142186|Q96KG9-6|SCYL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.75531005859375	2	420.756144	839.497735	0.18337	7.7154E-05	-2.3767	-0.001	-2.1933	-0.00092286	420.7550318985828	22.352	1.7415	21.741	20.512	22.253	-0.6107					82	43	2	0	0	0	0.81548	1	880	880		20.482	0	1	550570			60889	14969	40677	40693	68970	68970					0.07156641682752252
VGAPIALAT	9	Unmodified	_VGAPIALAT_					0	0	0			REV__nc|ENSG00000085982|Q9NVE5|USP40	REV__nc|ENSG00000085982|Q9NVE5|USP40	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.25775146484375	2	406.747453	811.480354	0.19349	7.8703E-05	2.7587	0.0011221	2.9522	0.0012008	406.7484716287593	40.824	1.5136	40.905	40.161	41.675	0.081345					65	49	2	0	0	0	0.20789	1	2573	2573		25.45	0	1	156890	+		60890	16902	40678	40694	68971	68971					0.06707301357084816
VGARFVSP	8	Unmodified	_VGARFVSP_					0	0	0			REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	REV__nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	416.2279357910156	2	416.73742	831.460287	0.85935	0.00035812	-2.2055	-0.00091912	-1.3462	-0.000561	416.73645794494286	50.189	1.271	51.034	50.313	51.584	0.84501					44	30	2	0	0	0	0.4196	1	4903	4903		26.796	0	1	449240	+		60891	20694	40679	40695	68972	68972					0.03781550417136259
VGARYIQTL	9	Unmodified	_VGARYIQTL_					0	0	0		nc|ENSG00000177830|Q9BWS9-3|CHID1;ENSG00000177830|ENST00000323578|CHID1;nc|ENSG00000177830|Q9BWS9-2|CHID1	nc|ENSG00000177830|Q9BWS9-3|CHID1	nc|ENSG00000177830|Q9BWS9-3|CHID1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.23602294921875	2	510.795466	1019.57638	2.4459	0.0012493	-0.91354	-0.00046663	1.5323	0.00078272	510.79409453167875	26.87	0.35978	26.53	26.277	26.637	-0.34035					10	7	2	0	0	0	0.20789	1	1503	1503		19.997	0	1	53829			60892	7165	40680	40696	68973	68973					0.06737449197191836
VGASLVLPS	9	Unmodified	_VGASLVLPS_					0	0	0		ENST00000586356.5_1_19:11411567-11411807:-|nuORF	ENST00000586356.5_1_19:11411567-11411807:-|nuORF	ENST00000586356.5_1_19:11411567-11411807:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7513427734375	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.78058	1	7560	7560		30.504	1.3541	1	579450			60893	14166	40681	40697	68974	68974					0.06383284011531032
VGASLVLPS	9	Unmodified	_VGASLVLPS_					0	0	0		ENST00000586356.5_1_19:11411567-11411807:-|nuORF	ENST00000586356.5_1_19:11411567-11411807:-|nuORF	ENST00000586356.5_1_19:11411567-11411807:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7509765625	2	421.752736	841.490919	-1.7818	-0.0007515	-1.2969	-0.00054696	-3.0787	-0.0012985	421.7522177518738	76.828	1.8707	76.953	75.249	77.12	0.12485					132	61	3	0	0	0	0.7932	1	7178	7178		23.042	1.0826	1	487030			60894	14166	40681	40697	68975	68975					0.06383284011531032
VGAVARSGPGT	11	Unmodified	_VGAVARSGPGT_					0	0	0		ENST00000571689.1_1_17:5095408-5113057:+|nuORF	ENST00000571689.1_1_17:5095408-5113057:+|nuORF	ENST00000571689.1_1_17:5095408-5113057:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.2672424316406	2	486.267073	970.519593	-0.74239	-0.000361	0.70437	0.00034251	-0.038029	-1.8492E-05	486.2673170980509	86.118	3.9821	86.565	85.471	89.453	0.44736					252	97	4	0	0	0	0.65746	1	10298	10298		37.812	2.1932	1	1474100			60895	14004	40682	40698	68976	68976					0.03315401640679738
VGAVIKSH	8	Unmodified	_VGAVIKSH_					0	0	0			REV__nc|ENSG00000102007|Q04941-2|PLP2	REV__nc|ENSG00000102007|Q04941-2|PLP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.23388671875	2	405.745245	809.475937	1.9625	0.0007963	-4.1877	-0.0016991	-2.2251	-0.00090284	405.7443427399392	26.55	0.18169	26.209	26.096	26.277	-0.34035					5	3	2	0	0	0	0.4196	1	1460	1460		8.2313	0	1	25955	+		60896	17317	40683	40699	68977	68977					0.06357836934182615
VGAVLEKKM	9	Unmodified	_VGAVLEKKM_					0	0	0		nc|ENSG00000158882|Q969M1-2|TOMM40L;ENSG00000158882|ENST00000367988|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.7910461425781	2	487.788795	973.563038	0.6235	0.00030414	2.5998	0.0012681	3.2233	0.0015723	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.7932	1	7771	7771		25.574	1.0549	1	479320			60897	5503	40684	40700	68978	68978					0.0751987509358969
VGCDAALR	8	Unmodified	_VGCDAALR_					0	0	0		ENST00000413716.6_1_2:55646999-55647056:-|nuORF	ENST00000413716.6_1_2:55646999-55647056:-|nuORF	ENST00000413716.6_1_2:55646999-55647056:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.7060546875	2	402.705263	803.395972	0.54215	0.00021833	-4.1231	-0.0016604	-3.5809	-0.0014421	402.70350422804876	24.881	0.53984	24.931	24.573	25.113	0.050453					18	15	2	0	0	0	0.90465	1	944	944		40.573	1.7665	1	22514			60898	11354	40685	40701	68979	68979					-0.013589727313160438
VGCGRGPP	8	Carbamidomethyl (C)	_VGC(Carbamidomethyl (C))GRGPP_	VGC(1)GRGPP		VGC(45)GRGPP		0	1	0			REV__ENSG00000053328|ENST00000338882|METTL24	REV__ENSG00000053328|ENST00000338882|METTL24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.1960754394531	2	400.197605	798.380657	-1.8178	-0.00072749	-3.3867	-0.0013554	-5.2045	-0.0020828	400.1965321988101	85.961	1.4792	86.146	85.747	87.226	0.18523					86	34	4	0	0	0	0.9159	1	8498	8498		44.531	7.5026	1	5691500	+		60899	16389	40686	40702	68980	68980	218				-0.02659839528496377
VGCLLLRA	8	Unmodified	_VGCLLLRA_					0	0	0			REV__ENST00000292090.7_1_17:27052370-27052539:-|nuORF	REV__ENST00000292090.7_1_17:27052370-27052539:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.7555236816406	2	422.757298	843.500044	-0.74002	-0.00031285	-2.822	-0.001193	-3.562	-0.0015059	422.75593991539887	57.593	1.04	57.987	57.655	58.695	0.39407					58	25	3	0	0	0	0.86288	1	6029	6029		26.796	3.7594	1	2287500	+		60900	24672	40687	40703	68981	68981					0.07203354096191106
VGDIVLQV	8	Unmodified	_VGDIVLQV_					0	0	0			REV__ENST00000437534.3_1_15:43890378-43891468:+|nuORF	REV__ENST00000437534.3_1_15:43890378-43891468:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.7699279785156	2	421.752736	841.490919	-1.4034	-0.00059188	-1.5091	-0.00063647	-2.9125	-0.0012284	421.7520531140624	74.467	1.1672	74.553	74.103	75.27	0.085899					62	40	2	0	0	0	0.4196	1	6837	6837		37.159	0	1	71324	+		60901	23727	40688	40704	68982	68982					0.06383284011519663
VGDIVLQV	8	Unmodified	_VGDIVLQV_					0	0	0			REV__ENST00000437534.3_1_15:43890378-43891468:+|nuORF	REV__ENST00000437534.3_1_15:43890378-43891468:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	421.752736	841.490919	-1.3761	-0.00058039	-1.4964	-0.0006311	-2.8725	-0.0012115	421.75198258992555	74.671	0.59071	74.671	74.488	75.079	0	0.059003	0.0017598	NaN	37.159	30	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37586	+		60902	23727	40688	40704							0.06383284011519663
VGDLLVLGG	9	Unmodified	_VGDLLVLGG_					0	0	0		ENSG00000196376|ENST00000360388|SLC35F1;nc|ENSG00000196376|Q5T1Q4-2|SLC35F1	ENSG00000196376|ENST00000360388|SLC35F1	ENSG00000196376|ENST00000360388|SLC35F1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7512512207031	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.7932	1	7568	7568		25.45	1.2474	1	579450			60903	8047	40689	40705	68983	68983					0.06383284011531032
VGDLLVLGG	9	Unmodified	_VGDLLVLGG_					0	0	0		ENSG00000196376|ENST00000360388|SLC35F1;nc|ENSG00000196376|Q5T1Q4-2|SLC35F1	ENSG00000196376|ENST00000360388|SLC35F1	ENSG00000196376|ENST00000360388|SLC35F1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.75177001953125	2	421.752736	841.490919	0.52197	0.00022014	-3.586	-0.0015124	-3.0641	-0.0012923	421.75120102075306	76.93	5.4352	77.065	74.35	79.785	0.13478					321	189	2	0	0	0	0.72402	1	7161	7161		38.806	6.8513	1	423780			60904	8047	40689	40705	68984	68984					0.06383284011531032
VGDRKALFL	9	Unmodified	_VGDRKALFL_					0	0	0		ENST00000453383.5_3_7:157130244-157130448:+|nuORF	ENST00000453383.5_3_7:157130244-157130448:+|nuORF	ENST00000453383.5_3_7:157130244-157130448:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.80352783203125	2	509.805834	1017.59712	-0.38176	-0.00019462	-3.8277	-0.0019514	-4.2095	-0.002146	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.72402	1	8256	8256		38.806	8.3025	1	948010			60905	11932	40690	40706	68985	68985					0.08902039576844345
VGDRKALFL	9	Unmodified	_VGDRKALFL_					0	0	0		ENST00000453383.5_3_7:157130244-157130448:+|nuORF	ENST00000453383.5_3_7:157130244-157130448:+|nuORF	ENST00000453383.5_3_7:157130244-157130448:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8036804199219	2	509.805834	1017.59712	-1.4574	-0.000743	-2.7703	-0.0014123	-4.2277	-0.0021553	509.8043637533019	84.325	2.6865	84.475	82.851	85.537	0.14952					176	61	4	0	0	0	0.64922	1	8176	8176		44.117	9.9443	1	920080			60906	11932	40690	40706	68986	68986					0.08902039576844345
VGDSLTAH	8	Unmodified	_VGDSLTAH_					0	0	0			REV__nc|ENSG00000138757|Q9UN86-2|G3BP2	REV__nc|ENSG00000138757|Q9UN86-2|G3BP2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.196533203125	2	400.200867	798.387182	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.011	1	83.076	82.576	83.576	0.06591								0	0	0	0.27203	1	8232	8232		57.453	0	1		+		60907	15839	40691	40707	68987	68987					-0.02007623096142197
VGEALILLV	9	Unmodified	_VGEALILLV_					0	0	0		ENST00000503010.1_1_5:114951908-114961566:-|nuORF;ENSG00000134970|ENST00000456936|TMED7	ENST00000503010.1_1_5:114951908-114961566:-|nuORF	ENST00000503010.1_1_5:114951908-114961566:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8015441894531	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.7932	1	3609	3609		12.959	0	1	251610			60908	3975	40692	40708	68988	68988					0.11905003113815837
VGEALILLV	9	Unmodified	_VGEALILLV_					0	0	0		ENST00000503010.1_1_5:114951908-114961566:-|nuORF;ENSG00000134970|ENST00000456936|TMED7	ENST00000503010.1_1_5:114951908-114961566:-|nuORF	ENST00000503010.1_1_5:114951908-114961566:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8000183105469	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3274	3274		12.959	0	1	942760			60909	3975	40692	40708	68989	68989					0.11905003113815837
VGEITLREEPK	11	Unmodified	_VGEITLREEPK_					0	0	0			REV__ENSG00000089022|ENST00000550735|MAPKAPK5	REV__ENSG00000089022|ENST00000550735|MAPKAPK5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2372741699219	3	424.238232	1269.69287	0.90096	0.00038222	-0.38685	-0.00016412	0.51411	0.0002181	424.23789327912226	18.833	0.43093	18.356	18.171	18.602	-0.47694					25	9	4	0	0	0	0.67762	1	433	433		35.178	0	1	137000	+		60910	16955	40693	40709	68990	68990					0.06880722906430492
VGELRLLFEAR	11	Unmodified	_VGELRLLFEAR_					0	0	0		ENSG00000137825|ENST00000260386|ITPKA	ENSG00000137825|ENST00000260386|ITPKA	ENSG00000137825|ENST00000260386|ITPKA	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.1959533691406	3	434.922467	1301.74557	1.7815	0.0007748	3.2712	0.0014227	5.0527	0.0021975	434.92368467277294	24.124	0.37854	23.61	23.28	23.658	-0.51365					9	8	2	0	0	0	0.17365	1	1141	1141		26.75	10.829	1	23820			60911	4239	40694	40710	68991	68991					0.10676725759913097
VGETAEHPE	9	Unmodified	_VGETAEHPE_					0	0	0			REV__ENSG00000180884|ENST00000404801|ZNF792	REV__ENSG00000180884|ENST00000404801|ZNF792	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23590087890625	2	484.719621	967.42469	-1.2819	-0.00062138	-1.3257	-0.00064261	-2.6077	-0.001264	484.71885589785256	87.72	1.3852	88.183	87.602	88.987	0.46312					51	33	2	0	0	0	0.20789	1	10285	10285		27.882	1.0861	1	144800	+		60912	22422	40695	40711	68992	68992					-0.06032576621191765
VGFCLVRI	8	Unmodified	_VGFCLVRI_					0	0	0		ENST00000507522.1_1_5:251563-256495:+|nuORF	ENST00000507522.1_1_5:251563-256495:+|nuORF	ENST00000507522.1_1_5:251563-256495:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.7656555175781	2	453.765123	905.515694	-1.1321	-0.0005137	2.6718	0.0012124	1.5397	0.00069868	453.76616777983287	42.672	2.6946	42.633	41.368	44.062	-0.038223					96	64	2	0	0	0	0.90024	1	3262	3262		39.021	1.993	1	295630			60913	12958	40696	40712	68993	68993					0.0591564061326153
VGFLPKTRRQ	10	Unmodified	_VGFLPKTRRQ_					0	0	0		nc|ENSG00000066933|B2RTY4-5|MYO9A;nc|ENSG00000066933|B2RTY4-2|MYO9A;ENSG00000066933|ENST00000356056|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A;ENST00000563542.5_1_15:72185266-72338904:-|nuORF;nc|ENSG00000066933|B2RTY4-3|MYO9A	nc|ENSG00000066933|B2RTY4-5|MYO9A	nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.245361328125	3	401.243652	1200.70913	-0.1653	-6.6325E-05	3.4604	0.0013884	3.2951	0.0013221	401.2449412226133	21.064	0.80942	20.436	20.077	20.887	-0.62835					49	20	3	0	0	0	0.63899	1	720	720		47.96	1.9873	1	634220			60914	1172	40697	40713	68994	68994					0.11679893653831641
VGFSVKNAS	9	Unmodified	_VGFSVKNAS_					0	0	0		ENST00000492880.1_1_3:149213287-149213530:+|nuORF	ENST00000492880.1_1_3:149213287-149213530:+|nuORF	ENST00000492880.1_1_3:149213287-149213530:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.7447204589844	2	454.745442	907.476331	-0.13391	-6.0896E-05	-0.83302	-0.00037881	-0.96693	-0.00043971	454.7449043410658	103.95	1.6099	103.94	103.26	104.87	-0.0035706					76	38	3	0	0	0	0.78536	1	11197	11197		29.15	1.2673	1	761390			60915	12709	40698	40714	68995	68995					0.01889211863374385
VGGAGLGRH	9	Unmodified	_VGGAGLGRH_					0	0	0			REV__ENST00000483187.5_1_9:139685862-139687379:+|nuORF	REV__ENST00000483187.5_1_9:139685862-139687379:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.1756896972656	2	412.230294	822.446034	0.3598	0.00014832	-3.6117	-0.0014888	-3.2519	-0.0013405	412.22897671841946	95.276	0.35941	95.696	95.627	95.986	0.41964					10	8	2	0	0	0	0.20789	1	11460	11460		31.955	18.18	1	128660	+		60916	27103	40699	40715	68996	68996					0.02770897988852994
VGGEALGRL	9	Unmodified	_VGGEALGRL_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.2533264160156	2	436.253434	870.492316	-0.78422	-0.00034212	-0.74102	-0.00032327	-1.5252	-0.00066539	436.25302027653987	43.953	1.5822	44.403	43.27	44.853	0.45025					58	38	3	0	0	0	0.12688	2	4003	4003;4018		87.696	32.92	1	1463800		+	60917	8826;620	40700	40716	68997;68998	68997					0.051889181002820806
VGGEALGRL	9	Unmodified	_VGGEALGRL_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.2505798339844	2	436.253434	870.492316	-1.259	-0.00054923	-0.63671	-0.00027777	-1.8957	-0.00082699	436.25306316069333	43.734	1.1664	44.508	43.708	44.875	0.7738					51	28	3	0	0	0	0.71772	2	3993	3993;4005		39.253	1.4413	1	1307000		+	60918	8826;620	40700	40716	68999;69000	68999					0.051889181002820806
VGGEALGRL	9	Unmodified	_VGGEALGRL_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	436.253434	870.492316	-1.814	-0.00079137	1.3516	0.00058966	-0.46237	-0.00020171	436.2539814308127	44.707	0.50648	44.707	44.416	44.923	0	0.026316	0.0013105	NaN	87.696	19	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61822		+	60919	8826;620	40700	40716							0.051889181002820806
VGGEALGRL	9	Unmodified	_VGGEALGRL_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	436.253434	870.492316	-1.6046	-0.00070001	0.84484	0.00036856	-0.75975	-0.00033144	436.2536894532025	44.825	0.60306	44.837	44.425	45.028	0.012058	0.15659	0.0008683	NaN	87.696	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60883		+	60920	8826;620	40700	40716							0.051889181002820806
VGGEALGRL	9	Unmodified	_VGGEALGRL_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	436.253434	870.492316	0.232	0.00010121	-0.44935	-0.00019603	-0.21735	-9.482E-05	436.25315014268256	44.807	0.58435	44.856	44.451	45.035	0.048996	0.17484	-0.00026089	NaN	87.696	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60309		+	60921	8826;620	40700	40716							0.051889181002820806
VGGEALGRL	9	Unmodified	_VGGEALGRL_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	436.253434	870.492316	-0.28333	-0.0001236	0.78099	0.00034071	0.49766	0.00021711	436.25389042812947	44.842	0.50733	44.773	44.391	44.899	-0.06863	0.092272	0.0008126	NaN	87.696	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64931		+	60922	8826;620	40700	40716							0.051889181002820806
VGGFGKPF	8	Unmodified	_VGGFGKPF_					0	0	0		ENST00000362065.8_1_15:31233909-31234176:+|nuORF	ENST00000362065.8_1_15:31233909-31234176:+|nuORF	ENST00000362065.8_1_15:31233909-31234176:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.2328186035156	2	404.721239	807.427924	0.75522	0.00030565	0.63244	0.00025596	1.3877	0.00056161	404.72223647654516	85.191	0.2605	85.119	84.89	85.15	-0.071953					6	5	2	0	0	0	0.4196	1	8716	8716		13.775	0	1	19721			60923	10502	40701	40717	69001	69001					0.016507630141290974
VGGGAPAP	8	Unmodified	_VGGGAPAP_					0	0	0			REV__ENST00000274853.7_1_6:30653619-30653868:-|nuORF	REV__ENST00000274853.7_1_6:30653619-30653868:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.1692504882812	1	625.330402	624.323125	0.3629	0.00022693	-2.4124	-0.0015085	-2.0495	-0.0012816	625.3239337727146	38.413	0.22745	38.508	38.366	38.594	0.094322					10	7	2	0	0	0	0.4196	1	2278	2278		5.0869	3.4679	1	51018	+		60924	24568	40702	40718	69002	69002					-0.0040635846243048945
VGGGCFIF	8	Unmodified	_VGGGCFIF_					0	0	0		ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.1963806152344	2	400.193999	798.373446	0.60168	0.00024079	3.0431	0.0012178	3.6447	0.0014586	400.19549041096013	86.068	1.3495	86.217	85.858	87.207	0.14902					77	31	4	0	0	0	0.91333	2	8468	8468;8494		43.626	9.4535	1	5538900			60925	7121	40703	40719	69003;69004	69003					-0.03380572128946824
VGGGCPGRP	9	Unmodified	_VGGGCPGRP_					0	0	0			REV__ENST00000556433.5_1_14:69445007-69445439:-|nuORF	REV__ENST00000556433.5_1_14:69445007-69445439:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.1966857910156	2	400.197605	798.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.618	1	82.677	82.177	83.177	0.059166								0	0	0	0.36781	1	8274	8274		50.025	3.2581	1		+		60926	28699	40704	40720	69005	69005					-0.02659839528507746
VGGGLRQR	8	Unmodified	_VGGGLRQR_					0	0	0		ENST00000549111.5_1_12:103248818-103310977:-|nuORF	ENST00000549111.5_1_12:103248818-103310977:-|nuORF	ENST00000549111.5_1_12:103248818-103310977:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75201416015625	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.86791	1	7486	7486		28.254	0	1	532850			60927	13629	40705	40721	69006	69006					0.061148733972345326
VGGLELIV	8	Unmodified	_VGGLELIV_					0	0	0		ENSG00000169126|ENST00000305242|ODAD2;nc|ENSG00000169126|Q5T2S8-2|ODAD2	ENSG00000169126|ENST00000305242|ODAD2	ENSG00000169126|ENST00000305242|ODAD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.2481689453125	2	400.249829	798.485105	0.55585	0.00022248	-2.9993	-0.0012005	-2.4435	-0.00097801	400.2484529763441	24.6	0.84744	24.655	24.318	25.165	0.055025					44	24	3	0	0	0	0.83466	1	911	911		23.037	0	1	85580			60928	6471	40706	40722	69007	69007					0.07780185499848358
VGGLKNTLVHR	11	Unmodified	_VGGLKNTLVHR_					0	0	0		nc|ENSG00000240891|Q0VAA5-2|PLCXD2;ENSG00000240891|ENST00000636933|PLCXD2	nc|ENSG00000240891|Q0VAA5-2|PLCXD2	nc|ENSG00000240891|Q0VAA5-2|PLCXD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.36474609375	2	597.359296	1192.70404	-0.56757	-0.00033904	-1.0155	-0.00060663	-1.5831	-0.00094568	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.69995	1	10794	10794		31.53	3.4483	1	3951300			60929	8787	40707	40723	69008	69008					0.115395897911867
VGGLTMKLLS	10	Unmodified	_VGGLTMKLLS_					0	0	0			REV__ENSG00000110046|ENST00000377264|ATG2A	REV__ENSG00000110046|ENST00000377264|ATG2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.80413818359375	2	509.801903	1017.58925	0.9788	0.00049899	2.5641	0.0013072	3.5429	0.0018062	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.86718	1	8724	8724		27.882	0	1	979740	+		60930	17789	40708	40724	69009	69009					0.08116144265068215
VGGRGASVP	9	Unmodified	_VGGRGASVP_					0	0	0		ENSG00000130751|ENST00000602212|NPAS1	ENSG00000130751|ENST00000602212|NPAS1	ENSG00000130751|ENST00000602212|NPAS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.22552490234375	2	400.224677	798.434801	0.91161	0.00036485	1.1831	0.00047351	2.0947	0.00083836	400.2250799094815	16.285	0.27367	16.363	16.25	16.524	0.077959					20	11	2	0	0	0	0.78983	1	82	82		27.882	3.3782	1	80212			60931	3677	40709	40725	69010	69010					0.027520758947161994
VGGRPGRL	8	Unmodified	_VGGRPGRL_					0	0	0			REV__ENST00000492423.5_1_2:232651186-232653667:+|nuORF	REV__ENST00000492423.5_1_2:232651186-232653667:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2484130859375	2	406.248486	810.48242	2.7178	0.0011041	-2.1477	-0.00087251	0.57008	0.0002316	406.24748869064086	111.72	0.8214	111.69	111.25	112.07	-0.025414					71	31	3	0	0	0	0.82419	1	12375	12375		13.775	0	1	80466	+		60932	27674	40710	40726	69011	69011					0.06959774885569914
VGGTHPGGR	9	Unmodified	_VGGTHPGGR_					0	0	0		ENST00000496700.5_1_14:105954396-105954633:+|nuORF	ENST00000496700.5_1_14:105954396-105954633:+|nuORF	ENST00000496700.5_1_14:105954396-105954633:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.7642822265625	2	419.219926	836.425299	1.0444	0.00043785	1.2538	0.00052561	2.2982	0.00096346	419.2181061349124	33.144	0.12595	33.355	33.271	33.397	0.21168					4	2	2	0	0	0	0.20789	1	2380	2380		30.504	0	1	18553			60933	12788	40711	40727	69012	69012					0.000543076091958028
VGGYRCSPAY	10	Unmodified	_VGGYRCSPAY_					0	0	0			REV__ENSG00000178233|ENST00000451188|TMEM151B	REV__ENSG00000178233|ENST00000451188|TMEM151B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.745361328125	2	536.747659	1071.48076	-0.65993	-0.00035422	-2.9397	-0.0015779	-3.5996	-0.0019321	536.7459714608132	69.256	1.875	69.803	69.324	71.199	0.54694					117	48	5	0	0	0	0.86718	1	7670	7670		27.882	0	1	5310600	+		60934	22268	40712	40728	69013	69013					-0.05211646985367224
VGHKVNLQ	8	Unmodified	_VGHKVNLQ_					0	0	0		nc|ENSG00000179115|Q9Y285-2|FARSA;ENSG00000179115|ENST00000314606|FARSA	nc|ENSG00000179115|Q9Y285-2|FARSA	nc|ENSG00000179115|Q9Y285-2|FARSA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.7616271972656	2	447.761426	893.5083	1.3347	0.00059763	-2.5954	-0.0011621	-1.2607	-0.00056451	447.76038296550075	23.705	4.4673	23.13	22.409	26.877	-0.57415					218	103	6	0	0	0	0.92457	1	1014	1014		47.916	5.4411	1	38285000			60935	7245	40713	40729	69014	69014					0.057286243371777346
VGIAGTKTK	9	Unmodified	_VGIAGTKTK_					0	0	0		ENST00000359856.10_1_1:183596533-183596665:-|nuORF	ENST00000359856.10_1_1:183596533-183596665:-|nuORF	ENST00000359856.10_1_1:183596533-183596665:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7710266113281	2	437.77146	873.528367	0.1715	7.5079E-05	-0.39989	-0.00017506	-0.22839	-9.9982E-05	437.77136961322685	37.748	2.5245	37.847	36.672	39.197	0.099274					187	78	4	0	0	0	0.71772	1	2224	2224		39.253	0	1	1151500			60936	10437	40714	40730	69015	69015					0.0865437527713766
VGIFVRFFGSK	11	Unmodified	_VGIFVRFFGSK_					0	0	0			REV__ENSG00000184374|ENST00000332843|COLEC10	REV__ENSG00000184374|ENST00000332843|COLEC10	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	628.859130859375	2	628.861141	1255.70773	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.106	1	28.134	27.634	28.634	0.02817								0	0	0	0.56276	1	1144	1144		25.126	2.5463	1		+		60937	22670	40715	40731	69016	69016					0.09010259565093293
VGIMIGVL	8	Unmodified	_VGIMIGVL_					0	0	0		nc|ENSG00000105388|P06731-2|CEACAM5;ENSG00000105388|ENST00000221992|CEACAM5	nc|ENSG00000105388|P06731-2|CEACAM5	nc|ENSG00000105388|P06731-2|CEACAM5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2490234375	2	401.248775	800.482997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.2	1	111.24	110.74	111.74	0.041832								0	0	0	0.29725	1	13457	13457		24.504	0	1				60938	2212	40716	40732	69017	69017					0.07477433490407748
VGIPVTVQ	8	Unmodified	_VGIPVTVQ_					0	0	0			REV__nc|ENSG00000059573|P54886-2|ALDH18A1	REV__nc|ENSG00000059573|P54886-2|ALDH18A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.74884033203125	2	406.747453	811.480354	-0.092654	-3.7687E-05	3.8365	0.0015605	3.7438	0.0015228	406.74902529134783	36.591	1.613	36.572	35.876	37.489	-0.018673					71	35	3	0	0	0	0.86288	1	2357	2357		26.796	6.3143	1	102320	+		60939	16444	40717	40733	69018	69018					0.06707301357096185
VGKGPAKLSHI	11	Unmodified	_VGKGPAKLSHI_					0	0	0		ENST00000510852.1_1_4:120188537-120193190:+|nuORF;ENSG00000145390|ENST00000692078|USP53	ENST00000510852.1_1_4:120188537-120193190:+|nuORF	ENST00000510852.1_1_4:120188537-120193190:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.838134765625	2	553.837665	1105.66078	0.36951	0.00020465	-0.47831	-0.00026491	-0.1088	-6.0257E-05	553.8373555611722	18.714	0.42133	18.237	17.983	18.404	-0.47694					18	8	3	0	0	0	0.66929	1	427	427		36.447	1.2947	1	140970			60940	4768	40718	40734	69019	69019					0.11217400013947554
VGKHNFSK	8	Unmodified	_VGKHNFSK_					0	0	0		ENSG00000184677|ENST00000375647|ZBTB40;nc|ENSG00000184677|Q9NUA8-2|ZBTB40	ENSG00000184677|ENST00000375647|ZBTB40	ENSG00000184677|ENST00000375647|ZBTB40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7515869140625	2	458.753601	915.49265	1.1793	0.00054099	-4.175	-0.0019153	-2.9957	-0.0013743	458.75130962594056	23.717	1.8273	23.143	22.747	24.574	-0.57415					83	41	4	0	0	0	0.94135	1	1083	1083		54.776	1.8396	1	885740			60941	7638	40719	40735	69020	69020					0.03152337820131379
VGKIDHSVSY	10	Unmodified	_VGKIDHSVSY_					0	0	0		nc|ENSG00000038427|P13611-5|VCAN;ENSG00000038427|ENST00000265077|VCAN;nc|ENSG00000038427|P13611-3|VCAN	nc|ENSG00000038427|P13611-5|VCAN	nc|ENSG00000038427|P13611-5|VCAN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7896728515625	2	552.787838	1103.56112	-0.074961	-4.1437E-05	3.9272	0.0021709	3.8523	0.0021295	552.7899670073601	73.384	1.516	73.938	73.561	75.077	0.55386					106	41	4	0	0	0	0.076789	4	8294	8294;8307;8319;8332		104.75	27.9	1	13238000			60942	917	40720	40736	69021;69022;69023;69024	69021					0.013485376093512969
VGKKKKKK	8	Unmodified	_VGKKKKKK_					0	0	0			REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.28741455078125	2	472.342387	942.67022	-0.91776	-0.0004335	-1.737	-0.00082044	-2.6547	-0.0012539	472.34225772500264	95.28	0.28899	95.511	95.428	95.717	0.23103					9	6	2	0	0	0	0.4196	1	9772	9772		4.3163	0	1	66158	+		60943	26311	40721	40737	69025	69025					0.19659213090119465
VGKKKKKKKKA	11	Unmodified	_VGKKKKKKKKA_					0	0	0			REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.3055725097656	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.203	1	34.249	33.749	34.749	0.045849								0	0	0	0.56276	1	1712	1712		3.4087	0	1		+		60944	26311	40722	40738	69026	69026					0.27310751578238524
VGKLFRPN	8	Unmodified	_VGKLFRPN_					0	0	0		nc|ENSG00000116701|P19878-3|NCF2;ENSG00000116701|ENST00000367535|NCF2	nc|ENSG00000116701|P19878-3|NCF2	nc|ENSG00000116701|P19878-3|NCF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.777587890625	2	465.779619	929.544686	-1.5315	-0.00071332	-2.8632	-0.0013336	-4.3947	-0.0020469	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.884	1	7930	7930		33.516	0.70317	1	991370			60945	2937	40723	40739	69027	69027					0.07709501233887295
VGKLIAVL	8	Unmodified	_VGKLIAVL_					0	0	0			REV__nc|ENSG00000211965|A0A0A0MS15|IGHV3-49	REV__nc|ENSG00000211965|A0A0A0MS15|IGHV3-49	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7843322753906	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.90465	1	1680	1680		40.573	0	1	1879900	+		60946	30196	40724	40740	69028	69028					0.13981055150509292
VGKLLIRA	8	Unmodified	_VGKLLIRA_					0	0	0		ENST00000399070.3_2_18:32886564-32887857:+|nuORF	ENST00000399070.3_2_18:32886564-32887857:+|nuORF	ENST00000399070.3_2_18:32886564-32887857:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.30010986328125	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.86288	1	6728	6728		26.796	5.0938	1	1680500			60947	11200	40725	40741	69029	69029					0.14627262273359065
VGKLLIRA	8	Unmodified	_VGKLLIRA_					0	0	0		ENST00000399070.3_2_18:32886564-32887857:+|nuORF	ENST00000399070.3_2_18:32886564-32887857:+|nuORF	ENST00000399070.3_2_18:32886564-32887857:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.30023193359375	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.80706	1	6652	6652		19.36	4.6959	1	2081500			60948	11200	40725	40741	69030	69030					0.14627262273359065
VGKLLLGI	8	Unmodified	_VGKLLLGI_					0	0	0		ENSG00000165449|ENST00000395348|SLC16A9	ENSG00000165449|ENST00000395348|SLC16A9	ENSG00000165449|ENST00000395348|SLC16A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78521728515625	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.82419	1	1659	1659		13.775	0	1	1606100			60949	6082	40726	40742	69031	69031					0.13981055150509292
VGKLLLGI	8	Unmodified	_VGKLLLGI_					0	0	0		ENSG00000165449|ENST00000395348|SLC16A9	ENSG00000165449|ENST00000395348|SLC16A9	ENSG00000165449|ENST00000395348|SLC16A9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.784912109375	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.88915	1	1663	1663		35.201	8.4046	1	1965300			60950	6082	40726	40742	69032	69032					0.13981055150509292
VGKLLLGI	8	Unmodified	_VGKLLLGI_					0	0	0		ENSG00000165449|ENST00000395348|SLC16A9	ENSG00000165449|ENST00000395348|SLC16A9	ENSG00000165449|ENST00000395348|SLC16A9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7851257324219	2	406.783839	811.553125	0.30634	0.00012461	3.4308	0.0013956	3.7371	0.0015202	406.7851080123586	29.615	1.556	29.525	28.974	30.53	-0.089546					92	35	4	0	0	0	0.81724	1	1935	1935		14.664	0	1	1963500			60951	6082	40726	40742	69033	69033					0.13981055150509292
VGKLLLGI	8	Unmodified	_VGKLLLGI_					0	0	0		ENSG00000165449|ENST00000395348|SLC16A9	ENSG00000165449|ENST00000395348|SLC16A9	ENSG00000165449|ENST00000395348|SLC16A9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7853698730469	2	406.783839	811.553125	0.12711	5.1707E-05	3.399	0.0013826	3.5261	0.0014344	406.78513803821613	31.106	0.82648	31.109	30.404	31.23	0.0037212					29	18	2	0	0	0	0.85787	1	2114	2114		9.4706	0	1	2249400			60952	6082	40726	40742	69034	69034					0.13981055150509292
VGKMKNCGP	9	Unmodified	_VGKMKNCGP_					0	0	0		ENST00000357736.8_1_17:79878238-79878646:-|nuORF	ENST00000357736.8_1_17:79878238-79878646:-|nuORF	ENST00000357736.8_1_17:79878238-79878646:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.23333740234375	2	467.235873	932.457192	-1.0397	-0.00048579	-4.3726	-0.002043	-5.4123	-0.0025288	467.23372611150774	69.413	2.1998	69.548	69.082	71.282	0.13522					162	104	3	0	0	0	0.5393	1	6263	6263		50.025	0	1	8546900			60953	10394	40727	40743	69035	69035					-0.01173784023535518
VGKRPQFV	8	Unmodified	_VGKRPQFV_					0	0	0			REV__ENSG00000022840|ENST00000325954|RNF10	REV__ENSG00000022840|ENST00000325954|RNF10	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7783203125	2	465.779619	929.544686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.287	1	80.287	79.787	80.787	0								0	0	0	0.30125	1	7406	7406		20.482	0	1		+		60954	16245	40728	40744	69036	69036					0.07709501233898663
VGKSALVSH	9	Unmodified	_VGKSALVSH_					0	0	0		ENST00000501412.2_1_12:69042504-69042582:+|nuORF	ENST00000501412.2_1_12:69042504-69042582:+|nuORF	ENST00000501412.2_1_12:69042504-69042582:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.26007080078125	2	449.261259	896.507966	-0.13632	-6.1244E-05	-1.331	-0.00059798	-1.4674	-0.00065923	449.26055039529075	68.162	1.4065	68.547	67.946	69.352	0.38483					66	33	3	0	0	0	0.77546	1	7455	7455		31.955	0	1	1822600			60955	12843	40729	40745	69037	69037					0.05557204617332445
VGKTAATGLFY	11	Unmodified	_VGKTAATGLFY_					0	0	0			REV__ENST00000556052.1_1_14:23533533-23533737:-|nuORF	REV__ENST00000556052.1_1_14:23533533-23533737:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.3096313476562	2	564.308406	1126.60226	0.48028	0.00027102	-0.53507	-0.00030194	-0.054791	-3.0919E-05	564.3080689248469	74.956	0.69521	75.52	75.289	75.984	0.56458					40	16	4	0	0	0	0.55601	1	8494	8494		47.96	0.30219	1	1100100	+		60956	28694	40730	40746	69038	69038					0.04402298648778924
VGKTAATGLFY	11	Unmodified	_VGKTAATGLFY_					0	0	0			REV__ENST00000556052.1_1_14:23533533-23533737:-|nuORF	REV__ENST00000556052.1_1_14:23533533-23533737:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	564.308406	1126.60226	0.17086	9.6419E-05	-0.20229	-0.00011415	-0.031426	-1.7734E-05	564.3081374246972	75.153	0.67262	75.548	75.279	75.952	0.39507	0.013924	0.00026721	NaN	47.96	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1075700	+		60957	28694	40730	40746							0.04402298648778924
VGKTPPLFFFL	11	Unmodified	_VGKTPPLFFFL_					0	0	0			REV__ENST00000261254.7_1_12:4412550-4412766:+|nuORF	REV__ENST00000261254.7_1_12:4412550-4412766:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.58203125	3	422.58127	1264.72198	-0.18543	-7.8358E-05	1.9334	0.000817	1.7479	0.00073865	422.58203704906714	97.831	3.5899	97.888	96.517	100.11	0.056831					202	83	4	0	0	0	0.70737	1	10355	10355		26.75	6.4347	1	436660	+		60958	24383	40731	40747	69039	69039					0.10020911993365189
VGKVLLAL	8	Unmodified	_VGKVLLAL_					0	0	0		ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7851257324219	2	406.783839	811.553125	-0.045049	-1.8325E-05	3.807	0.0015486	3.7619	0.0015303	406.78524079935227	33.287	0.97472	33.291	32.894	33.869	0.0030785					79	22	4	0	0	0	0.80963	2	1922	1912;1922		20.482	0	1	346170			60959	12964	40732	40748	69040;69041	69041					0.13981055150509292
VGKVLLAL	8	Unmodified	_VGKVLLAL_					0	0	0		ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	2	406.783839	811.553125	-0.34246	-0.00013931	4.1924	0.0017054	3.85	0.0015661	406.78540084150717	29.66	1.7951	29.616	28.901	30.696	-0.043095					140	52	4	0	0	0	0.81724	2	1592	1592;1627		21.702	0	1	985720			60960	12964	40732	40748	69042;69043	69042					0.13981055150509292
VGKVLLAL	8	Unmodified	_VGKVLLAL_					0	0	0		ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.82464	2	1765	1736;1765		26.796	6.3143	1	1953100			60961	12964	40732	40748	69044;69045	69045					0.13981055150509292
VGKVLLAL	8	Unmodified	_VGKVLLAL_					0	0	0		ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7854919433594	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.662	1	30.774	30.274	31.274	0.11198								0	0	0	0.29498	1	1368	1368		26.796	0	1				60962	12964	40732	40748	69046	69046					0.13981055150509292
VGKVLLAL	8	Unmodified	_VGKVLLAL_					0	0	0		ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7856750488281	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.01	1	31.122	30.622	31.622	0.11198								0	0	0	0.31173	1	1401	1401		8.8223	0	1				60963	12964	40732	40748	69047	69047					0.13981055150509292
VGKVLLAL	8	Unmodified	_VGKVLLAL_					0	0	0		ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7853088378906	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.201	1	33.311	32.811	33.811	0.10991								0	0	0	0.29353	1	1602	1602		28.254	0	1				60964	12964	40732	40748	69048	69048					0.13981055150509292
VGKVLLAL	8	Unmodified	_VGKVLLAL_					0	0	0		ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78509521484375	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.643	1	33.752	33.252	34.252	0.109								0	0	0	0.29353	1	1657	1657		28.254	0	1				60965	12964	40732	40748	69049	69049					0.13981055150509292
VGKVLLAL	8	Unmodified	_VGKVLLAL_					0	0	0		ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78515625	2	406.783839	811.553125	0.022938	9.3307E-06	3.6731	0.0014942	3.696	0.0015035	406.7851827724374	33.215	0.93484	33.182	32.78	33.715	-0.032677					97	42	3	0	0	0	0.80963	2	1571	1571;1634		28.254	0	1	368720			60966	12964	40732	40748	69050;69051	69050					0.13981055150509292
VGKVLLAL	8	Unmodified	_VGKVLLAL_					0	0	0		ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7853088378906	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.80963	1	1662	1662		15.636	0	1	1879900			60967	12964	40732	40748	69052	69052					0.13981055150509292
VGKVLLAL	8	Unmodified	_VGKVLLAL_					0	0	0		ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7853088378906	2	406.783839	811.553125	1.1655	0.00047412	2.3762	0.00096659	3.5417	0.0014407	406.7846691604622	32.902	0.76672	33.072	32.59	33.356	0.16971					56	17	4	0	0	0	0.81548	3	2355	2295;2355;2369		29.842	0	1	1453200			60968	12964	40732	40748	69053;69054;69055	69054					0.13981055150509292
VGKVLLAL	8	Unmodified	_VGKVLLAL_					0	0	0		ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	ENST00000507834.3_1_4:86167663-86168062:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78521728515625	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.248	1	31.328	30.828	31.828	0.079834								0	0	0	0.30674	1	2101	2101		15.636	0	1				60969	12964	40732	40748	69056	69056					0.13981055150509292
VGKVLLKNQSQ	11	Unmodified	_VGKVLLKNQSQ_					0	0	0		nc|ENSG00000185019|O94941-2|UBOX5;ENSG00000185019|ENST00000217173|UBOX5	nc|ENSG00000185019|O94941-2|UBOX5	nc|ENSG00000185019|O94941-2|UBOX5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.2454833984375	3	405.24695	1212.71902	1.65	0.00066868	-1.1207	-0.00045416	0.52934	0.00021451	405.24639893952656	23.489	3.066	23.108	22.404	25.47	-0.38178					149	70	4	0	0	0	0.72892	1	1147	1147		26.75	1.6237	1	247320			60970	7669	40733	40749	69057	69057					0.12117036868562536
VGKVMIAKH	9	Unmodified	_VGKVMIAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7954406738281	2	491.796955	981.579357	-1.5463	-0.00076044	-0.86884	-0.00042729	-2.4151	-0.0011877	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.78536	2	4115	4115;4146		29.15	2.5607	1	1240000	+		60971	19182	40734	40750	69058;69059	69058					0.08783001050335315
VGKVMIAKH	9	Unmodified	_VGKVMIAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7964782714844	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.364	1	56.364	55.864	56.864	0								0	0	0	0.32469	1	4830	4830		21.96	0.25755	1		+		60972	19182	40734	40750	69060	69060					0.08783001050335315
VGKVMIAKH	9	Unmodified	_VGKVMIAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7957458496094	2	491.796955	981.579357	-1.7512	-0.00086123	-0.84159	-0.00041389	-2.5928	-0.0012751	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.74721	1	3825	3825		37.159	0	1	2627300	+		60973	19182	40734	40750	69061	69061					0.08783001050335315
VGKVMIAKH	9	Unmodified	_VGKVMIAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7960205078125	2	491.796955	981.579357	-0.71315	-0.00035073	-1.6418	-0.00080745	-2.355	-0.0011582	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.7932	1	3806	3806		24.203	0	1	1219600	+		60974	19182	40734	40750	69062	69062					0.08783001050335315
VGKVMIAKH	9	Unmodified	_VGKVMIAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7959289550781	2	491.796955	981.579357	-0.71044	-0.00034939	-1.7767	-0.00087377	-2.4871	-0.0012232	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.7932	1	4142	4142		16.473	0.83134	1	571510	+		60975	19182	40734	40750	69063	69063					0.08783001050335315
VGKVMIAKH	9	Unmodified	_VGKVMIAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7960510253906	2	491.796955	981.579357	0.38495	0.00018932	-2.7704	-0.0013625	-2.3854	-0.0011731	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.7932	1	4579	4579		20.947	0.4651	1	2075300	+		60976	19182	40734	40750	69064	69064					0.08783001050335315
VGKVMIAKH	9	Unmodified	_VGKVMIAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7966613769531	2	491.796955	981.579357	-0.17405	-8.5598E-05	-2.3461	-0.0011538	-2.5202	-0.0012394	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.78536	1	3533	3533		29.15	1.2673	1	2994900	+		60977	19182	40734	40750	69065	69065					0.08783001050335315
VGKVMIAKH	9	Unmodified	_VGKVMIAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7960205078125	2	491.796955	981.579357	-0.41148	-0.00020237	-2.1054	-0.0010354	-2.5169	-0.0012378	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.7932	1	4319	4319		16.473	0	1	887820	+		60978	19182	40734	40750	69066	69066					0.08783001050335315
VGKVMIAKH	9	Unmodified	_VGKVMIAKH_					0	0	0			REV__ENSG00000135046|ENST00000257497|ANXA1	REV__ENSG00000135046|ENST00000257497|ANXA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79638671875	2	491.796955	981.579357	-0.47857	-0.00023536	-1.801	-0.0008857	-2.2795	-0.0011211	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.7932	1	4560	4560		21.96	0.25755	1	1898900	+		60979	19182	40734	40750	69067	69067					0.08783001050335315
VGKVRVAGGG	10	Unmodified	_VGKVRVAGGG_					0	0	0		nc|ENSG00000277288|B7Z368|LINC02881	nc|ENSG00000277288|B7Z368|LINC02881	nc|ENSG00000277288|B7Z368|LINC02881	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2744140625	2	450.274701	898.534849	-1.7763	-0.00079984	1.0964	0.00049366	-0.67999	-0.00030618	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.85939	1	9598	9598		23.042	2.5607	1	35178000			60980	15315	40735	40751	69068	69068					0.08152313228526964
VGKWLSFYLL	10	Unmodified	_VGKWLSFYLL_					0	0	0			REV__ENSG00000142319|ENST00000270349|SLC6A3	REV__ENSG00000142319|ENST00000270349|SLC6A3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	409.2353820800781	3	409.237504	1224.69068	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.71	1	25.756	25.256	26.256	0.045507								0	0	0	0.45132	1	1035	1035		26.063	0.17167	1		+		60981	19736	40736	40752	69069	69069					0.08732338959271146
VGLALLKR	8	Unmodified	_VGLALLKR_					0	0	0		nc|ENSG00000087269|P78316-2|NOP14;ENSG00000087269|ENST00000416614|NOP14	nc|ENSG00000087269|P78316-2|NOP14	nc|ENSG00000087269|P78316-2|NOP14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.30010986328125	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.81548	1	7305	7305		20.482	0	1	881780			60982	1574	40737	40753	69070	69070					0.14627262273359065
VGLALLKR	8	Unmodified	_VGLALLKR_					0	0	0		nc|ENSG00000087269|P78316-2|NOP14;ENSG00000087269|ENST00000416614|NOP14	nc|ENSG00000087269|P78316-2|NOP14	nc|ENSG00000087269|P78316-2|NOP14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2999572753906	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.86791	1	6848	6848		28.254	0	1	1852500			60983	1574	40737	40753	69071	69071					0.14627262273359065
VGLALLKR	8	Unmodified	_VGLALLKR_					0	0	0		nc|ENSG00000087269|P78316-2|NOP14;ENSG00000087269|ENST00000416614|NOP14	nc|ENSG00000087269|P78316-2|NOP14	nc|ENSG00000087269|P78316-2|NOP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2997131347656	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.80706	1	8221	8221		19.36	0	1	5485100			60984	1574	40737	40753	69072	69072					0.14627262273359065
VGLALLKR	8	Unmodified	_VGLALLKR_					0	0	0		nc|ENSG00000087269|P78316-2|NOP14;ENSG00000087269|ENST00000416614|NOP14	nc|ENSG00000087269|P78316-2|NOP14	nc|ENSG00000087269|P78316-2|NOP14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001403808594	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81724	1	8389	8389		14.664	0	1	6323600			60985	1574	40737	40753	69073	69073					0.14627262273359065
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.1965026855469	2	400.195251	798.375948	-0.18739	-7.4993E-05	0.9279	0.00037134	0.74051	0.00029635	400.19593739643125	82.746	1.2452	82.812	82.44	83.685	0.06591					67	28	5	0	0	0	0.89457	2	8184	8184;8207		37.028	3.5129	1	4451600			60986	7276;13370	40738	40754	69074;69075	69074					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.19677734375	2	400.195251	798.375948	-0.18716	-7.4901E-05	-0.47934	-0.00019183	-0.6665	-0.00026673	400.1952819307741	86.353	1.3706	86.421	85.987	87.357	0.067444					79	31	5	0	0	0	0.86288	2	8710	8697;8710		29.842	0.69198	1	2357200			60987	7276;13370	40738	40754	69076;69077	69077					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.1965026855469	2	400.195251	798.375948	0.51059	0.00020433	0.0072802	2.9135E-06	0.51787	0.00020725	400.1955363705816	82.964	1.6149	82.898	82.456	84.071	-0.066185					89	37	4	0	0	0	0.87276	2	8491	8479;8491		46.766	9.6073	1	4296700			60988	7276;13370	40738	40754	69078;69079	69079					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.1969909667969	2	400.195251	798.375948	0.9179	0.00036734	-0.83352	-0.00033357	0.084388	3.3772E-05	400.1951514766141	86.536	1.7122	86.462	86.013	87.725	-0.073769					84	39	4	0	0	0	0.89457	1	8984	8984		37.028	6.5248	1	3325200			60989	7276;13370	40738	40754	69080	69080					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.1973571777344	2	400.195251	798.375948	2.7375	0.0010955	-2.8679	-0.0011477	-0.13038	-5.2175E-05	400.19430392281004	82.738	1.2461	82.797	82.427	83.673	0.059166					65	28	4	0	0	0	0.88915	2	8346	8335;8346		42.474	5.3154	1	4511800			60990	7276;13370	40738	40754	69081;69082	69082					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.1965026855469	2	400.195251	798.375948	2.9562	0.001183	-1.7373	-0.00069525	1.2189	0.00048779	400.19504393030127	86.25	1.3268	86.305	85.975	87.302	0.055641					56	30	3	0	0	0	0.87276	2	8802	8766;8802		39.021	1.8624	1	2395800			60991	7276;13370	40738	40754	69083;69084	69084					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	400.1965026855469	2	400.195251	798.375948	-1.8242	-0.00073005	2.0396	0.00081626	0.21542	8.621E-05	400.196324479631	82.498	1.2255	82.653	82.3	83.526	0.15474					77	28	4	0	0	0	0.92176	1	7973	7973		46.766	0	1	6786400			60992	7276;13370	40738	40754	69085	69085					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.1959533691406	2	400.195251	798.375948	0.60168	0.00024079	-0.083456	-3.3399E-05	0.51822	0.00020739	400.19549041096013	86.068	1.3495	86.217	85.858	87.207	0.14902					77	31	4	0	0	0	0.87276	2	8456	8456;8481		39.021	1.8624	1	5538900			60993	7276;13370	40738	40754	69086;69087	69086					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.197998046875	2	400.195251	798.375948	-1.7396	-0.00069617	2.312	0.00092527	0.57247	0.0002291	400.1964299805563	82.569	1.537	82.695	82.281	83.818	0.12601					84	35	4	0	0	0	0.91005	1	7881	7881		42.474	5.446	1	5438900			60994	7276;13370	40738	40754	69088	69088					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.19659423828125	2	400.195251	798.375948	1.0095	0.00040398	-1.2012	-0.0004807	-0.19171	-7.6722E-05	400.19508038720977	81.709	1.4923	82.135	81.837	83.33	0.42646					93	36	4	0	0	0	0.87276	1	9463	9463		29.842	1.5873	1	32993000			60995	7276;13370	40738	40754	69089	69089					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.19537353515625	2	400.195251	798.375948	1.1195	0.00044802	-1.7514	-0.0007009	-0.63189	-0.00025288	400.194879000031	85.082	1.7417	85.522	85.026	86.768	0.43967					94	42	4	0	0	0	0.87276	2	9913	9901;9913		39.021	0.21535	1	30482000			60996	7276;13370	40738	40754	69090;69091	69091					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.1966552734375	2	400.195251	798.375948	-0.12707	-5.0854E-05	-0.36419	-0.00014575	-0.49127	-0.0001966	400.19544340069075	81.631	1.4124	82.131	81.786	83.198	0.49966					81	34	4	0	0	0	0.91005	1	9496	9496		42.474	1.9018	1	35228000			60997	7276;13370	40738	40754	69092	69092					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.19586181640625	2	400.195251	798.375948	-0.4695	-0.00018789	0.31555	0.00012628	-0.15395	-6.1611E-05	400.1956755271944	85.113	2.0219	85.561	85.155	87.177	0.44736					102	49	4	0	0	0	0.87276	2	9994	9994;10018		46.766	9.6073	1	34648000			60998	7276;13370	40738	40754	69093;69094	69093					-0.03130445190288356
VGLDPSPD	8	Unmodified	_VGLDPSPD_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1;ENST00000532027.5_1_11:6568031-6569307:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.19610595703125	2	400.195251	798.375948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.83	1	86.278	85.778	86.778	0.44736								0	0	0	0.2946	1	10068	10068		52.299	18.784	1				60999	7276;13370	40738	40754	69095	69095					-0.03130445190288356
VGLEIHRRAIF	11	Unmodified	_VGLEIHRRAIF_					0	0	0			REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.5939025878906	3	437.594573	1309.76189	0.57035	0.00024958	-2.4363	-0.0010661	-1.8659	-0.00081652	437.59337174172776	17.144	0.52434	17.12	16.872	17.396	-0.024035					55	24	3	0	0	0	0.69931	1	220	220		31.634	8.2564	1	367140	+		61000	16807	40739	40755	69096	69096					0.11939851716647354
VGLGLLRCLKQ	11	Unmodified	_VGLGLLRCLKQ_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-4|MYH14	REV__nc|ENSG00000105357|Q7Z406-4|MYH14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.5802001953125	3	400.581276	1198.722	0.73398	0.00029402	-2.5466	-0.0010201	-1.8126	-0.00072611	400.58019198099043	112.22	0.2012	112.29	112.11	112.31	0.066025					17	6	3	0	0	0	0.75906	1	12087	12087		20.03	0.7678	1	433760	+		61001	17528	40740	40756	69097	69097					0.13058588721719389
VGLGLRHQHS	10	Unmodified	_VGLGLRHQHS_					0	0	0			REV__nc|ENSG00000102312|Q9H237-5|PORCN	REV__nc|ENSG00000102312|Q9H237-5|PORCN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.3059692382812	2	552.307064	1102.59957	1.2817	0.0007079	-2.5363	-0.0014008	-1.2546	-0.00069293	552.3055879663088	92.425	4.1438	92.471	91.024	95.168	0.045448					321	98	5	0	0	0	0.86348	1	9583	9583		31.53	3.4483	1	1712700	+		61002	17334	40741	40757	69098	69098					0.052378880345031575
VGLKPDVYKLF	11	Unmodified	_VGLKPDVYKLF_					0	0	0			REV__ENST00000526878.5_1_11:460175-490579:+|nuORF	REV__ENST00000526878.5_1_11:460175-490579:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	639.8803100585938	2	639.876456	1277.73836	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.405	1	30.403	29.903	30.903	-0.0022526								0	0	0	0.56276	1	1337	1337		30.318	1.1477	1		+		61003	22024	40742	40758	69099	69099					0.11059993159460646
VGLLGDEP	8	Unmodified	_VGLLGDEP_					0	0	0			REV__ENSG00000167971|ENST00000343516|CASKIN1	REV__ENSG00000167971|ENST00000343516|CASKIN1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.19573974609375	2	400.213443	798.412334	0.56888	0.00022767	-0.51016	-0.00020417	0.058719	2.35E-05	400.213382260632	82.458	0.29385	82.603	82.461	82.755	0.14551					9	6	2	0	0	0	0.4196	1	7966	7966		46.766	9.738	1	48423	+		61004	21441	40743	40759	69100	69100					0.005064317064238821
VGLLLLLT	8	Unmodified	_VGLLLLLT_					0	0	0			REV__ENSG00000197471|ENST00000652691|SPN	REV__ENSG00000197471|ENST00000652691|SPN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2571105957031	2	421.291497	840.568441	1.0305	0.00043416	-2.7352	-0.0011523	-1.7047	-0.00071817	421.2902436578025	23.205	0.54122	22.786	22.575	23.116	-0.41879					18	12	2	0	0	0	0.4196	1	986	986		14.664	0	1	29253	+		61005	23235	40744	40760	69101	69101					0.1417792194769163
VGLLPSGLS	9	Unmodified	_VGLLPSGLS_					0	0	0			REV__ENST00000429812.5_1_8:22437750-22437888:+|nuORF	REV__ENST00000429812.5_1_8:22437750-22437888:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.75225830078125	2	421.752736	841.490919	-1.7818	-0.0007515	-1.2969	-0.00054696	-3.0787	-0.0012985	421.7522177518738	76.828	1.8707	76.953	75.249	77.12	0.12485					132	61	3	0	0	0	0.62081	1	7185	7185		45.952	5.3793	1	487030	+		61006	26594	40745	40761	69102	69102					0.06383284011531032
VGLLRRRRRRA	11	Unmodified	_VGLLRRRRRRA_					0	0	0			REV__ENST00000446845.5_1_3:38207005-38207431:+|nuORF	REV__ENST00000446845.5_1_3:38207005-38207431:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.3115539550781	3	470.311393	1407.91235	-1.0845	-0.00051006	0.9313	0.000438	-0.15322	-7.206E-05	470.3118043400699	16.431	0.36591	16.479	16.402	16.767	0.047802					29	15	3	0	0	0	0.78391	1	156	156		14.694	1.7362	1	178620	+		61007	26813	40746	40762	69103	69103					0.22471056218796548
VGLLSLGPL	9	Unmodified	_VGLLSLGPL_					0	0	0			REV__ENST00000361611.10_1_14:23504095-23504149:-|nuORF	REV__ENST00000361611.10_1_14:23504095-23504149:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2523193359375	2	434.778754	867.542954	-1.3322	-0.00057919	4.2037	0.0018277	2.8715	0.0012485	434.780566550516	77.569	0.52432	77.569	77.466	77.99	0					36	25	2	0	0	0	0.20789	1	7091	7091		23.042	11.531	1	73048	+		61008	25507	40747	40763	69104	69104					0.10388447425270897
VGLLTSPGV	9	Unmodified	_VGLLTSPGV_					0	0	0		ENST00000469563.1_1_1:894013-894620:-|nuORF	ENST00000469563.1_1_1:894013-894620:-|nuORF	ENST00000469563.1_1_1:894013-894620:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7514343261719	2	421.752736	841.490919	-1.7818	-0.0007515	-1.2969	-0.00054696	-3.0787	-0.0012985	421.7522177518738	76.828	1.8707	76.953	75.249	77.12	0.12485					132	61	3	0	0	0	0.7932	1	7123	7123		24.203	0	1	487030			61009	12205	40748	40764	69105	69105					0.06383284011531032
VGLPIGLAP	9	Unmodified	_VGLPIGLAP_					0	0	0			REV__ENST00000578492.5_1_17:62776963-62777681:-|nuORF	REV__ENST00000578492.5_1_17:62776963-62777681:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.76446533203125	2	418.765646	835.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.357	1	33.527	33.027	34.027	0.16971								0	0	0	0.35004	1	2397	2397		14.664	0	1		+		61010	29027	40749	40765	69106	69106					0.09240178253799058
VGLPLAPGT	9	Unmodified	_VGLPLAPGT_					0	0	0		ENSG00000196428|ENST00000688009|TSC22D2;nc|ENSG00000196428|O75157|TSC22D2	ENSG00000196428|ENST00000688009|TSC22D2	ENSG00000196428|ENST00000688009|TSC22D2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7463073730469	2	412.747453	823.480354	-1.8202	-0.00075129	-0.83652	-0.00034527	-2.6567	-0.0010966	412.7469769415949	84.864	3.004	85.04	83.072	86.076	0.17561					129	69	4	0	0	0	0.7932	1	8255	8255		25.45	0	1	1518200			61011	8053	40750	40766	69107	69107					0.06155301357091503
VGLRARGA	8	Unmodified	_VGLRARGA_					0	0	0			REV__ENST00000339570.9_1_12:125262502-125262823:-|nuORF	REV__ENST00000339570.9_1_12:125262502-125262823:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.24859619140625	2	400.248486	798.48242	2.8149	0.0011266	-2.0128	-0.0008056	0.80212	0.00032105	400.24758038028125	25.002	0.86704	24.965	24.581	25.448	-0.037176					34	22	2	0	0	0	0.82464	1	959	959		21.702	1.2205	1	108830	+		61012	25234	40751	40767	69108	69108					0.07511774885563227
VGLSASLTH	9	Unmodified	_VGLSASLTH_					0	0	0			REV__ENST00000557552.1_1_14:105238371-105239528:-|nuORF	REV__ENST00000557552.1_1_14:105238371-105239528:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7449951171875	2	442.745442	883.476331	0.70525	0.00031225	-2.1241	-0.00094045	-1.4189	-0.0006282	442.7443686579111	91.271	2.0811	91.72	90.611	92.692	0.44958					87	49	3	0	0	0	0.77546	1	10796	10796		31.955	1.4512	1	3166400	+		61013	28719	40752	40768	69109	69109					0.029932118633610116
VGLSASLTH	9	Unmodified	_VGLSASLTH_					0	0	0			REV__ENST00000557552.1_1_14:105238371-105239528:-|nuORF	REV__ENST00000557552.1_1_14:105238371-105239528:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7445983886719	2	442.745442	883.476331	-0.84967	-0.00037619	-0.44682	-0.00019783	-1.2965	-0.00057401	442.74508565704974	91.361	1.8975	91.832	90.855	92.753	0.47068					98	45	4	0	0	0	0.69914	1	10881	10881		40.573	4.9543	1	3563500	+		61014	28719	40752	40768	69110	69110					0.029932118633610116
VGLSKTTIKN	10	Unmodified	_VGLSKTTIKN_					0	0	0			REV__ENST00000233630.10_1_2:74735069-74735567:-|nuORF	REV__ENST00000233630.10_1_2:74735069-74735567:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.8212280273438	2	530.821681	1059.62881	-0.034622	-1.8378E-05	-1.4405	-0.00076466	-1.4751	-0.00078304	530.820933749492	80.358	1.1642	80.42	79.976	81.14	0.062225					91	34	3	0	0	0	0.86802	1	7938	7938		27.047	4.4677	1	600980	+		61015	24205	40753	40769	69111	69111					0.10137987540133508
VGLTLLVAVF	10	Unmodified	_VGLTLLVAVF_					0	0	0			REV__ENST00000587992.1_1_19:10444535-10445133:-|nuORF	REV__ENST00000587992.1_1_19:10444535-10445133:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3138427734375	2	516.328611	1030.64267	0.80932	0.00041788	2.7817	0.0014363	3.591	0.0018541	516.3302693213577	99.766	0.61185	99.917	99.594	100.21	0.15073					16	13	2	0	0	0	0.37624	1	10387	10387		23.042	1.0826	1	108070	+		61016	16728	40754	40770	69112	69112					0.1285726503922433
VGLTTAKVS	9	Unmodified	_VGLTTAKVS_					0	0	0			REV__nc|ENSG00000128567|O00592-2|PODXL	REV__nc|ENSG00000128567|O00592-2|PODXL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2645568847656	2	438.263468	874.512382	-1.5746	-0.00069011	0.33915	0.00014864	-1.2355	-0.00054147	438.26361252646154	40.288	4.9179	40.294	39.712	44.63	0.0065002					371	140	5	0	0	0	0.7932	1	3063	3063		16.473	0.83134	1	22924000	+		61017	18779	40755	40771	69113	69113					0.07010669040232642
VGLVPTVAS	9	Unmodified	_VGLVPTVAS_					0	0	0			REV__ENSG00000198719|ENST00000366756|DLL1	REV__ENSG00000198719|ENST00000366756|DLL1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.75177001953125	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.563	1	76.652	76.152	77.152	0.089363								0	0	0	0.27974	1	7137	7137		38.806	5.2906	1		+		61018	23362	40756	40772	69114	69114					0.06383284011531032
VGLVVLPQ	8	Unmodified	_VGLVVLPQ_					0	0	0			REV__ENSG00000170385|ENST00000367001|SLC30A1	REV__ENSG00000170385|ENST00000367001|SLC30A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7671203613281	2	412.765646	823.516739	1.2585	0.00051947	2.4286	0.0010024	3.6871	0.0015219	412.7665201070099	37.01	2.3211	37.292	35.703	38.024	0.28173					152	57	4	0	0	0	0.86288	1	2992	2992		26.796	2.5934	1	3102100	+		61019	21655	40757	40773	69115	69115					0.09792178253815109
VGMAVPLH	8	Unmodified	_VGMAVPLH_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.17572021484375	2	412.228374	822.442194	-1.8021	-0.00074288	-0.4145	-0.00017087	-2.2166	-0.00091375	412.2277459956525	94.566	0.20605	94.797	94.694	94.9	0.23103					5	4	2	0	0	0	0.4196	1	9659	9659		24.504	0	1	30547	+		61020	28273	40758	40774	69116	69116					0.02387092170761207
VGNVCKGQ	8	Unmodified	_VGNVCKGQ_					0	0	0			REV__nc|ENSG00000041982|P24821-3|TNC	REV__nc|ENSG00000041982|P24821-3|TNC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7054138183594	2	402.705263	803.395972	1.6104	0.00064852	-1.0397	-0.0004187	0.57069	0.00022982	402.7048140873336	25.264	0.87722	24.936	24.476	25.353	-0.32825					41	19	4	0	0	0	0.92457	1	1290	1290		47.916	0	1	275430	+		61021	16324	40759	40775	69117	69117					-0.013589727313160438
VGPDGVRRKCQ	11	Unmodified	_VGPDGVRRKCQ_					0	0	0		ENSG00000174529|ENST00000367167|TMEM81	ENSG00000174529|ENST00000367167|TMEM81	ENSG00000174529|ENST00000367167|TMEM81	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.5523376464844	3	405.552268	1213.63497	0.31154	0.00012634	0.37413	0.00015173	0.68567	0.00027808	405.55242896235654	28.737	3.0603	28.708	27.908	30.968	-0.029207					186	70	5	0	0	0	0.6921	1	1814	1814		22.562	0	1	9803100			61022	6944	40760	40776	69118	69118					0.03670182500013652
VGPEAKLH	8	Unmodified	_VGPEAKLH_					0	0	0			REV__ENST00000356994.6_1_8:144874515-144874681:-|nuORF	REV__ENST00000356994.6_1_8:144874515-144874681:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	425.7420654296875	2	425.742702	849.470852	0.10508	4.4737E-05	-1.0333	-0.00043993	-0.92823	-0.00039519	425.7419623603288	77.928	2.2687	78.491	77.83	80.099	0.56332					94	53	4	0	0	0	0.91005	1	8928	8928		42.474	5.446	1	2336700	+		61023	25400	40761	40777	69119	69119					0.04009533071575788
VGPEDASY	8	Unmodified	_VGPEDASY_					0	0	0			REV__nc|ENSG00000171126|Q8TAE7-2|KCNG3	REV__nc|ENSG00000171126|Q8TAE7-2|KCNG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1838073730469	2	419.184883	836.355213	-0.61734	-0.00025878	-3.4208	-0.0014339	-4.0381	-0.0016927	419.18379974001596	92.26	1.9431	92.723	91.934	93.877	0.46249					113	45	4	0	0	0	0.88915	1	10990	10990		35.201	3.2459	1	2961200	+		61024	15760	40762	40778	69120	69120					-0.06951035569943542
VGPGAPFHPWT	11	Unmodified	_VGPGAPFHPWT_					0	0	0		ENST00000502782.5_1_5:34838982-34863053:+|nuORF	ENST00000502782.5_1_5:34838982-34863053:+|nuORF	ENST00000502782.5_1_5:34838982-34863053:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	583.2966918945312	2	583.293091	1164.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.529	1	68.657	68.157	69.157	0.12838								0	0	0	0.56276	1	6172	6172		30.504	0.18592	1				61025	12864	40763	40779	69121	69121					-0.004074349455777337
VGPGGGRAVGP	11	Unmodified	_VGPGGGRAVGP_					0	0	0		ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.2552185058594	2	462.256508	922.498464	-1.0307	-0.00047644	-0.95869	-0.00044316	-1.9894	-0.0009196	462.2559435428212	48.824	0.88636	49.283	48.779	49.665	0.45983					43	21	3	0	0	0	0.50804	1	4729	4729		51.335	1.8939	1	4622100			61026	12798	40764	40780	69122	69122					0.03411436331805362
VGPGGGRAVGP	11	Unmodified	_VGPGGGRAVGP_					0	0	0		ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.2537841796875	2	462.256508	922.498464	-0.047188	-2.1813E-05	-1.8711	-0.00086493	-1.9183	-0.00088675	462.2554772123812	48.67	0.88339	49.575	49.21	50.093	0.90424					44	21	3	0	0	0	0.50804	1	4709	4709		51.335	0	1	4020800			61027	12798	40764	40780	69123	69123					0.03411436331805362
VGPGGGRAVGP	11	Unmodified	_VGPGGGRAVGP_					0	0	0		ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.2555236816406	2	462.256508	922.498464	0.68706	0.0003176	-2.3722	-0.0010966	-1.6851	-0.00077897	462.255277451458	50.161	1.7142	51.006	50.034	51.748	0.84501					77	41	3	0	0	0	0.37938	1	4934	4934		60.972	0	1	1891400			61028	12798	40764	40780	69124	69124					0.03411436331805362
VGPGGGRAVGP	11	Unmodified	_VGPGGGRAVGP_					0	0	0		ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	462.2551574707031	2	462.256508	922.498464	-0.0054579	-2.523E-06	-1.569	-0.00072529	-1.5745	-0.00072782	462.25568540929567	52.25	1.5618	52.917	52.105	53.667	0.66729					71	37	3	0	0	0	0.50804	1	5215	5215		51.335	1.8939	1	3541100			61029	12798	40764	40780	69125	69125					0.03411436331805362
VGPGGGRAVGP	11	Unmodified	_VGPGGGRAVGP_					0	0	0		ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	462.256508	922.498464	-1.1479	-0.0005306	-0.43284	-0.00020008	-1.5807	-0.00073069	462.2561316010427	50.7	0.93532	50.73	50.218	51.154	0.029629	-0.071866	0.001007	NaN	60.972	48	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	309990			61030	12798	40764	40780							0.03411436331805362
VGPGGGRAVGP	11	Unmodified	_VGPGGGRAVGP_					0	0	0		ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	ENST00000497036.5_1_22:50691832-50699551:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	462.256508	922.498464	-0.41541	-0.00019202	-1.2789	-0.00059118	-1.6943	-0.0007832	462.25572507259955	50.691	0.91424	50.599	50.35	51.265	-0.091797	-0.20243	0.00022481	NaN	60.972	43	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	292570			61031	12798	40764	40780							0.03411436331805362
VGPGLRPQH	9	Unmodified	_VGPGLRPQH_					0	0	0			REV__ENSG00000128313|ENST00000249044|APOL5	REV__ENSG00000128313|ENST00000249044|APOL5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.7698059082031	2	480.772326	959.530098	-1.7281	-0.00083081	-0.16542	-7.9531E-05	-1.8935	-0.00091034	480.77205912979906	40.726	0.55909	40.726	40.475	41.034	0					31	21	2	0	0	0	0.76996	1	2690	2690		33.516	0	1	236880	+		61032	18770	40765	40781	69126	69126					0.04871429085744694
VGPGPRPPP	9	Unmodified	_VGPGPRPPP_					0	0	0			REV__ENST00000308110.8_1_11:65628072-65628297:+|nuORF	REV__ENST00000308110.8_1_11:65628072-65628297:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2518310546875	2	437.250695	872.486836	0.31183	0.00013635	-0.13925	-6.0889E-05	0.17258	7.546E-05	437.25057889742067	17.58	0.38145	17.097	16.944	17.326	-0.48256					16	8	3	0	0	0	0.67235	1	287	287		42.474	14.22	1	63119	+		61033	24860	40766	40782	69127	69127					0.045492393084600735
VGPLILKKKEV	11	Unmodified	_VGPLILKKKEV_					0	0	0		ENSG00000145354|ENST00000273986|CISD2	ENSG00000145354|ENST00000273986|CISD2	ENSG00000145354|ENST00000273986|CISD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	409.2911376953125	3	408.607708	1222.80129	-1.9385	-0.00079207	-2.0492	-0.00083734	-3.9877	-0.0016294	408.60682759188285	19.066	0.63641	19.109	18.914	19.55	0.043747					38	30	2	0	0	0	0.17606	1	397	397		19.263	9.557	1	60419			61034	4764	40767	40783	69128	69128					0.19880558947511418
VGPRQRESRLL	11	Unmodified	_VGPRQRESRLL_					0	0	0		ENST00000575334.5_3_16:4463394-4466616:-|nuORF	ENST00000575334.5_3_16:4463394-4466616:-|nuORF	ENST00000575334.5_3_16:4463394-4466616:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.5936279296875	3	437.593232	1309.75787	-1.625	-0.00071111	2.758	0.0012069	1.133	0.00049578	437.5943775926199	17.133	0.5139	17.178	16.97	17.484	0.0457					57	22	4	0	0	0	0.74771	1	220	220		22.562	2.9347	1	252600			61035	14048	40768	40784	69129	69129					0.11537762222951642
VGPRVSRRRLR	11	Unmodified	_VGPRVSRRRLR_					0	0	0			REV__ENSG00000164236|ENST00000296657|ANKRD33B	REV__ENSG00000164236|ENST00000296657|ANKRD33B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.2255859375	3	451.288366	1350.84327	-0.29332	-0.00013237	2.1656	0.00097729	1.8722	0.00084492	451.623730676289	31.375	0.95393	31.324	31.012	31.966	-0.051031					35	21	2	0	0	0	0.1745	1	1817	1817		23.378	0.81632	1	49239	+		61036	21054	40769	40785	69130	69130					0.18187972199257274
VGPVALLLLL	10	Unmodified	_VGPVALLLLL_					0	0	0			REV__ENSG00000116176|ENST00000234798|TPSG1	REV__ENSG00000116176|ENST00000234798|TPSG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3450012207031	2	504.346803	1006.67905	0.37851	0.0001909	-3.3786	-0.001704	-3.0001	-0.0015131	504.3450503233635	54.756	1.9259	55.325	53.982	55.908	0.56836					89	45	3	0	0	0	0.86786	1	5684	5684		26.796	7.4361	1	1764400	+		61037	18185	40770	40786	69131	69131					0.175981419359573
VGPVALLLLL	10	Unmodified	_VGPVALLLLL_					0	0	0			REV__ENSG00000116176|ENST00000234798|TPSG1	REV__ENSG00000116176|ENST00000234798|TPSG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.3455505371094	2	504.346803	1006.67905	0.93532	0.00047173	-3.4819	-0.0017561	-2.5465	-0.0012843	504.3449357960576	55.64	0.72586	56.209	55.824	56.55	0.56836					45	18	3	0	0	0	0.85108	3	5743	5708;5743;5754		26.796	7.4361	1	1733500	+		61038	18185	40770	40786	69132;69133;69134	69133					0.175981419359573
VGPVVHRN	8	Unmodified	_VGPVVHRN_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	439.2525939941406	2	439.253769	876.492984	-0.15804	-6.9419E-05	-2.0425	-0.00089716	-2.2005	-0.00096658	439.25283253687115	90.959	2.4133	91.028	90.47	92.884	0.069328					111	57	3	0	0	0	0.86288	1	9366	9366		26.796	1.222	1	1503300	+		61039	18883	40771	40787	69135	69135					0.049797575399907146
VGPVVHRN	8	Unmodified	_VGPVVHRN_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	439.2524108886719	2	439.253769	876.492984	1.4468	0.0006355	-3.8494	-0.0016909	-2.4026	-0.0010554	439.25208082203966	90.936	2.3215	90.869	90.307	92.629	-0.067093					98	55	4	0	0	0	0.86288	1	9558	9558		26.796	0.10319	1	1599000	+		61040	18883	40771	40787	69136	69136					0.049797575399907146
VGPVVHRN	8	Unmodified	_VGPVVHRN_					0	0	0			REV__ENSG00000130589|ENST00000467148|HELZ2	REV__ENSG00000130589|ENST00000467148|HELZ2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.25250244140625	2	439.253769	876.492984	0.81271	0.00035698	-2.7895	-0.0012253	-1.9768	-0.00086832	439.2525507024124	90.643	2.1669	91.094	90.57	92.737	0.45058					91	51	3	0	0	0	0.86288	1	10747	10747		26.796	0.10319	1	929460	+		61041	18883	40771	40787	69137	69137					0.049797575399907146
VGQGIRAH	8	Unmodified	_VGQGIRAH_					0	0	0			REV__ENSG00000092439|ENST00000646667|TRPM7	REV__ENSG00000092439|ENST00000646667|TRPM7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1838073730469	2	419.238119	836.461684	-0.76266	-0.00031973	3.5821	0.0015018	2.8195	0.001182	419.23933041404666	91.777	0.72475	92.24	91.934	92.658	0.46249					28	16	2	0	0	0	0.4196	1	10990	10990		42.474	0	1	191170	+		61042	17033	40772	40788	69138	69138					0.03691184505885303
VGQITIGPISR	11	Unmodified	_VGQITIGPISR_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.8390502929688	2	570.840405	1139.66626	1.4099	0.00080484	-3.9627	-0.0022621	-2.5528	-0.0014572	570.8381986387325	50.383	0.69075	51.148	50.854	51.545	0.76494					40	16	3	0	0	0	0.6493	1	4989	4989		38.754	2.3069	1	2916800	+		61043	22442	40773	40789	69139	69139					0.10201078805744146
VGQITIGPISR	11	Unmodified	_VGQITIGPISR_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	570.840405	1139.66626	0.24304	0.00013874	-3.0157	-0.0017215	-2.7727	-0.0015827	570.8387431841412	50.551	0.65606	50.999	50.682	51.338	0.44761	-0.07468	0.00053844	NaN	38.754	39	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2779100	+		61044	22442	40773	40789							0.10201078805744146
VGQLKRVPRTG	11	Unmodified	_VGQLKRVPRTG_					0	0	0		nc|ENSG00000111906|Q7Z4H3-3|HDDC2;ENST00000609574.1_1_6:125621682-125623108:-|nuORF;nc|ENSG00000111906|Q7Z4H3-2|HDDC2;ENSG00000111906|ENST00000398153|HDDC2	nc|ENSG00000111906|Q7Z4H3-3|HDDC2	nc|ENSG00000111906|Q7Z4H3-3|HDDC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	605.8721313476562	2	605.872571	1209.73059	1.0692	0.00064779	-1.8241	-0.0011052	-0.75496	-0.00045741	605.8712819289403	100.09	1.5113	100.3	99.817	101.33	0.21512					93	35	4	0	0	0	0.7434	1	10493	10493		23.523	1.5628	1	798340			61045	2622	40774	40790	69140	69140					0.13411278682519878
VGQNASVLP	9	Unmodified	_VGQNASVLP_					0	0	0			REV__ENSG00000123500|ENST00000651968|COL10A1	REV__ENSG00000123500|ENST00000651968|COL10A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.7449951171875	2	442.745442	883.476331	-1.3973	-0.00061863	0.07774	3.4419E-05	-1.3195	-0.00058421	442.74530501109706	89.198	0.64397	89.405	89.043	89.687	0.20731					39	14	3	0	0	0	0.69914	1	8887	8887		40.573	1.7665	1	1011400	+		61046	18545	40775	40791	69141	69141					0.029932118633610116
VGRFLLHVA	9	Unmodified	_VGRFLLHVA_					0	0	0			REV__nc|ENSG00000203711|Q4VX62-2|LINC02901	REV__nc|ENSG00000203711|Q4VX62-2|LINC02901	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3110046386719	2	506.308544	1010.60253	-0.62631	-0.00031711	2.3163	0.0011728	1.69	0.00085565	506.31007289516646	61.122	1.0995	61.13	60.064	61.164	0.0081215					63	39	2	0	0	0	0.7932	1	5246	5246		19.36	0	1	191720	+		61047	30154	40776	40792	69142	69142					0.09765763159327889
VGRGLGQR	8	Unmodified	_VGRGLGQR_					0	0	0		ENST00000585077.1_1_17:80397907-80398237:+|nuORF	ENST00000585077.1_1_17:80397907-80398237:+|nuORF	ENST00000585077.1_1_17:80397907-80398237:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.75164794921875	2	421.751393	841.488233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.319	1	76.408	75.908	76.908	0.089363								0	0	0	0.30045	1	7105	7105		40.573	1.7665	1				61048	14143	40777	40793	69143	69143					0.061148733972345326
VGRGRGLP	8	Unmodified	_VGRGRGLP_					0	0	0		ENSG00000188177|ENST00000409871|ZC3H6;ENST00000476511.1_1_2:113067635-113069532:+|nuORF;ENST00000592618.5_1_19:1010351-1011343:-|nuORF	ENSG00000188177|ENST00000409871|ZC3H6	ENSG00000188177|ENST00000409871|ZC3H6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2484436035156	2	406.248486	810.48242	1.1517	0.00046786	-0.91843	-0.00037311	0.23322	9.4746E-05	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.88915	1	9396	9396		35.201	5.3592	1	58759000			61049	7913	40778	40794	69144	69144					0.06959774885547176
VGRGRPGL	8	Unmodified	_VGRGRPGL_					0	0	0			REV__ENST00000382882.7_2_4:2011010-2011436:-|nuORF	REV__ENST00000382882.7_2_4:2011010-2011436:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2476806640625	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.504	1	15.421	14.921	15.921	-0.083363								0	0	0	0.30004	1	49	49		21.702	0	1		+		61050	25981	40779	40795	69145	69145					0.06959774885547176
VGRKIVMDFL	10	Unmodified	_VGRKIVMDFL_					0	0	0		ENSG00000166135|ENST00000299163|HIF1AN;ENST00000478787.1_1_10:102296230-102304880:+|nuORF	ENSG00000166135|ENST00000299163|HIF1AN	ENSG00000166135|ENST00000299163|HIF1AN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3436279296875	2	589.341726	1176.6689	3.7001	0.0021806	-1.0769	-0.00063464	2.6233	0.001546	589.3408630817031	104.64	1.3141	104.87	104.2	105.52	0.2268					67	31	4	0	0	0	0.86272	1	12792	12792		24.519	4.5224	1	499450			61051	6160	40780	40796	69146	69146					0.08763210939059718
VGRKKGPN	8	Unmodified	_VGRKKGPN_					0	0	0		ENST00000297785.7_1_9:75524650-75527037:-|nuORF	ENST00000297785.7_1_9:75524650-75527037:-|nuORF	ENST00000297785.7_1_9:75524650-75527037:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2615661621094	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.84341	1	9521	9521		24.203	2.2429	1	52688000			61052	9766	40781	40797	69147	69147					0.0755604405703707
VGRKKGPN	8	Unmodified	_VGRKKGPN_					0	0	0		ENST00000297785.7_1_9:75524650-75527037:-|nuORF	ENST00000297785.7_1_9:75524650-75527037:-|nuORF	ENST00000297785.7_1_9:75524650-75527037:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2613830566406	2	428.261594	854.508634	-1.8497	-0.00079216	1.9562	0.00083775	0.10645	4.5588E-05	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.84341	1	9010	9010		24.203	1.1603	1	31323000			61053	9766	40781	40797	69148	69148					0.0755604405703707
VGRKKGPN	8	Unmodified	_VGRKKGPN_					0	0	0		ENST00000297785.7_1_9:75524650-75527037:-|nuORF	ENST00000297785.7_1_9:75524650-75527037:-|nuORF	ENST00000297785.7_1_9:75524650-75527037:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.2615051269531	2	428.261594	854.508634	1.2297	0.00052665	-1.0776	-0.00046151	0.1521	6.5138E-05	428.26104076888095	90.552	2.3243	91.003	90.412	92.737	0.45058					198	55	5	0	0	0	0.87064	1	10769	10769		29.15	0	1	32404000			61054	9766	40781	40797	69149	69149					0.0755604405703707
VGRKKGPN	8	Unmodified	_VGRKKGPN_					0	0	0		ENST00000297785.7_1_9:75524650-75527037:-|nuORF	ENST00000297785.7_1_9:75524650-75527037:-|nuORF	ENST00000297785.7_1_9:75524650-75527037:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.26171875	2	428.261594	854.508634	-1.021	-0.00043726	1.2368	0.00052966	0.21577	9.2404E-05	428.26203928148993	90.556	2.3584	91.026	90.524	92.882	0.47068					198	56	5	0	0	0	0.84341	2	10797	10726;10797		30.504	3.7075	1	38446000			61055	9766	40781	40797	69150;69151	69151					0.0755604405703707
VGRLVVRHGQ	10	Unmodified	_VGRLVVRHGQ_					0	0	0			REV__ENSG00000166825|ENST00000300060|ANPEP	REV__ENSG00000166825|ENST00000300060|ANPEP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3409423828125	2	560.838531	1119.66251	1.5674	0.00087906	4.2105	0.0023614	5.7779	0.0032405	560.8409417457908	88.76	1.7102	88.687	87.381	89.091	-0.07238					64	40	3	0	0	0	0.37624	1	9236	9236		31.53	16.665	1	237910	+		61056	21326	40782	40798	69152	69152					0.10746453822548574
VGRNVLELTDV	11	Unmodified	_VGRNVLELTDV_					0	0	0		nc|ENSG00000105426|Q13332-6|PTPRS;nc|ENSG00000105426|Q13332-3|PTPRS;nc|ENSG00000105426|Q13332-4|PTPRS;nc|ENSG00000105426|Q13332-2|PTPRS;ENSG00000105426|ENST00000262963|PTPRS;nc|ENSG00000105426|Q13332-7|PTPRS;nc|ENSG00000105426|Q13332-5|PTPRS;ENST00000588552.5_1_19:5159112-5286160:-|nuORF	nc|ENSG00000105426|Q13332-6|PTPRS	nc|ENSG00000105426|Q13332-6|PTPRS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	405.56488037109375	3	405.562827	1213.66665	1.3716	0.00055625	3.2979	0.0013375	4.6694	0.0018937	405.5640303977856	59.974	1.644	60.007	59.019	60.663	0.032822					112	41	3	0	0	0	0.76699	1	5617	5617		11.932	0	1	297440			61057	2215	40783	40799	69153	69153					0.06836453734922543
VGRQKRRRFVW	11	Unmodified	_VGRQKRRRFVW_					0	0	0		ENST00000479578.5_1_1:110198981-110200495:+|nuORF	ENST00000479578.5_1_1:110198981-110200495:+|nuORF	ENST00000479578.5_1_1:110198981-110200495:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.8271484375	3	496.632132	1486.87457	0.011822	5.8712E-06	-1.6704	-0.00082957	-1.6586	-0.0008237	496.9655700632029	17.897	0.25339	17.275	17.101	17.355	-0.62141					13	6	3	0	0	0	0.18164	1	311	311		6.6596	0	1	31725			61058	12409	40784	40800	69154	69154					0.1506054523331386
VGRRANID	8	Unmodified	_VGRRANID_					0	0	0		ENST00000294072.8_2_11:61116358-61116451:-|nuORF	ENST00000294072.8_2_11:61116358-61116451:-|nuORF	ENST00000294072.8_2_11:61116358-61116451:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.7545166015625	2	450.754133	899.493713	0.5597	0.00025229	-0.48919	-0.0002205	0.070512	3.1784E-05	450.7538239580323	79.562	2.1146	79.701	78.151	80.265	0.13883					102	73	2	0	0	0	0.89494	1	7516	7516		37.159	1.5408	1	128600			61059	9701	40785	40801	69155	69155					0.03994552189033129
VGRRPERKPQ	10	Unmodified	_VGRRPERKPQ_					0	0	0		ENST00000565926.1_1_16:2255258-2255417:+|nuORF	ENST00000565926.1_1_16:2255258-2255417:+|nuORF	ENST00000565926.1_1_16:2255258-2255417:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.24176025390625	3	408.242422	1221.70544	0.28973	0.00011828	-0.20608	-8.413E-05	0.083646	3.4148E-05	408.24230815440814	15.909	0.25357	15.311	15.212	15.465	-0.59873					9	5	3	0	0	0	0.85694	1	63	63		20.837	7.3292	1	102500			61060	13926	40786	40802	69156	69156					0.10345223879971854
VGRSIIKGN	9	Unmodified	_VGRSIIKGN_					0	0	0			REV__ENST00000600380.1_1_13:99101286-99101697:+|nuORF	REV__ENST00000600380.1_1_13:99101286-99101697:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28778076171875	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.78983	1	10478	10478		27.882	3.6795	1	50843000	+		61061	29311	40787	40803	69157	69157					0.0874858239999412
VGRVHTTN	8	Unmodified	_VGRVHTTN_					0	0	0		ENST00000579434.5_1_18:51796160-51796358:+|nuORF	ENST00000579434.5_1_18:51796160-51796358:+|nuORF	ENST00000579434.5_1_18:51796160-51796358:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.24090576171875	2	442.240858	882.467164	0.56789	0.00025114	-0.43357	-0.00019174	0.13431	5.9398E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.89043	1	8113	8113		35.618	5.1146	1	1094000			61062	14087	40788	40804	69158	69158					0.02122863297688582
VGSAGRLVAR	10	Unmodified	_VGSAGRLVAR_					0	0	0		nc|ENSG00000141098|Q3B7J2-2|GFOD2;ENST00000602522.1_1_16:67709060-67709966:-|nuORF;ENSG00000141098|ENST00000268797|GFOD2	nc|ENSG00000141098|Q3B7J2-2|GFOD2	nc|ENSG00000141098|Q3B7J2-2|GFOD2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.300048828125	2	493.298707	984.582862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.754	1	16.143	15.643	16.643	-0.6107								0	0	0	0.45132	1	173	173		20.947	1.587	1				61063	4478	40789	40805	69159	69159					0.08995387148547707
VGSDPVLMR	9	Unmodified	_VGSDPVLMR_					0	0	0		ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-3|CBLB;nc|ENSG00000114423|Q13191-2|CBLB	ENSG00000114423|ENST00000394030|CBLB	ENSG00000114423|ENST00000394030|CBLB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.260986328125	2	487.260402	972.506251	0.39196	0.00019099	3.5185	0.0017144	3.9105	0.0019054	487.2619601083902	16.47	0.18478	15.983	15.867	16.052	-0.48718					5	3	2	0	0	0	0.77546	1	137	137		31.955	2.8053	1	101230			61064	2769	40790	40806	69160	69160					0.018898275370588635
VGSDPVLMR	9	Unmodified	_VGSDPVLMR_					0	0	0		ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-3|CBLB;nc|ENSG00000114423|Q13191-2|CBLB	ENSG00000114423|ENST00000394030|CBLB	ENSG00000114423|ENST00000394030|CBLB	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	487.260402	972.506251	0.23981	0.00011685	3.5478	0.0017287	3.7876	0.0018456	487.2620583670757	16.441	0.32065	15.843	15.694	16.015	-0.59873	-0.070042	1.616E-05	NaN	31.955	11	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73375			61065	2769	40790	40806							0.018898275370588635
VGSGGPGGCF	10	Unmodified	_VGSGGPGGCF_					0	0	0			REV__ENST00000491791.1_1_3:49378051-49378129:-|nuORF	REV__ENST00000491791.1_1_3:49378051-49378129:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.183837890625	2	419.18162	836.348688	-0.61734	-0.00025878	4.3624	0.0018286	3.7451	0.0015699	419.18379974001596	92.26	1.9431	92.723	91.934	93.877	0.46249					113	45	4	0	0	0	0.81018	1	10978	10978		38.806	5.2906	1	2961200	+		61066	27663	40791	40807	69161	69161					-0.07603252002309091
VGSGGPPPPP	10	Unmodified	_VGSGGPPPPP_					0	0	0			REV__ENSG00000169184|ENST00000302326|MN1	REV__ENSG00000169184|ENST00000302326|MN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.22711181640625	2	431.226885	860.439217	2.9201	0.0012592	-2.3558	-0.0010159	0.56433	0.00024335	431.2258144078327	25.682	2.586	25.25	24.227	26.813	-0.4311					128	58	4	0	0	0	0.31414	1	1327	1327		71.296	5.4925	1	5689000	+		61067	21559	40792	40808	69162	69162					0.0034154031760635917
VGSGLYVL	8	Unmodified	_VGSGLYVL_					0	0	0		ENSG00000099960|ENST00000382932|SLC7A4	ENSG00000099960|ENST00000382932|SLC7A4	ENSG00000099960|ENST00000382932|SLC7A4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.5748596191406	2	404.234179	806.453805	0.56651	0.000229	-4.0523	-0.0016381	-3.4858	-0.0014091	404.23241120131036	82.164	1.9877	82.31	81.24	83.227	0.1455					92	45	3	0	0	0	0.4196	1	7825	7825		37.028	11.578	1	313820			61068	1779	40793	40809	69163	69163					0.04283612465758324
VGSIELVT	8	Unmodified	_VGSIELVT_					0	0	0		ENSG00000181718|ENST00000641661|OR5T2;nc|ENSG00000181718|Q8NGG2|OR5T2	ENSG00000181718|ENST00000641661|OR5T2	ENSG00000181718|ENST00000641661|OR5T2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.25030517578125	2	409.236919	816.459284	0.98423	0.00040278	-2.108	-0.00086266	-1.1237	-0.00045988	409.23413204050644	28.122	0.38862	27.868	27.587	27.976	-0.25465					11	8	2	0	0	0	0.4196	1	1682	1682		12.207	0	1	21066			61069	7400	40794	40810	69164	69164					0.04371291257575649
VGSIHLVN	8	Unmodified	_VGSIHLVN_					0	0	0			REV__ENST00000262593.9_1_20:53171544-53205043:+|nuORF	REV__ENST00000262593.9_1_20:53171544-53205043:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.7646484375	2	419.742702	837.470852	0.9897	0.00041542	-1.1246	-0.00047203	-0.13486	-5.6607E-05	419.7419988246886	33.006	0.58785	33.217	32.809	33.397	0.21168					18	13	2	0	0	0	0.4196	1	2390	2390		30.504	0	1	107730	+		61070	24427	40795	40811	69165	69165					0.04561533071557733
VGSLMFLH	8	Unmodified	_VGSLMFLH_					0	0	0			REV__ENSG00000171492|ENST00000337338|LRRC8D	REV__ENSG00000171492|ENST00000337338|LRRC8D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2392578125	2	452.241481	902.468409	-0.38468	-0.00017397	-3.6502	-0.0016508	-4.0349	-0.0018247	452.23969293569223	25.238	1.266	24.91	24.476	25.742	-0.32825					51	28	3	0	0	0	0.9159	1	1308	1308		44.531	5.7249	1	474500	+		61071	21737	40796	40812	69166	69166					0.013273613422370545
VGSLQACF	8	Unmodified	_VGSLQACF_					0	0	0		nc|ENSG00000117009|O15229-3|KMO;nc|ENSG00000117009|O15229-2|KMO;ENSG00000117009|ENST00000366559|KMO;ENST00000484229.1_1_1:241695702-241713185:+|nuORF	nc|ENSG00000117009|O15229-3|KMO	nc|ENSG00000117009|O15229-3|KMO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.1756286621094	2	412.702189	823.389824	2.1271	0.00087784	-0.23316	-9.6227E-05	1.8939	0.00078162	412.7019416764608	95.075	0.71669	95.508	95.202	95.919	0.4324					25	17	2	0	0	0	0.4196	1	11321	11321		31.955	0	1	250910			61072	2961	40797	40813	69167	69167					-0.028934909628446803
VGSLVLGRSGT	11	Unmodified	_VGSLVLGRSGT_					0	0	0			REV__nc|ENSG00000057149|P29508-2|SERPINB3	REV__nc|ENSG00000057149|P29508-2|SERPINB3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3037719726562	2	523.303655	1044.59276	-0.75421	-0.00039468	0.83726	0.00043814	0.083058	4.3465E-05	523.3039964981095	91.826	2.332	91.826	91.507	93.839	0					135	53	3	0	0	0	0.67778	1	9032	9032		35.152	1.6364	1	769560	+		61073	16424	40798	40814	69168	69168					0.07224530363305348
VGSNADINF	9	Unmodified	_VGSNADINF_					0	0	0			REV__ENSG00000081138|ENST00000397968|CDH7	REV__ENSG00000081138|ENST00000397968|CDH7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232360839844	2	468.724707	935.43486	-0.75515	-0.00035396	-1.6747	-0.00078499	-2.4299	-0.001139	468.7237161519137	93.418	1.0486	93.868	93.278	94.327	0.44988					49	24	3	0	0	0	0.76764	1	11166	11166		34.173	0	1	570630	+		61074	16817	40799	40815	69169	69169					-0.03543968895951366
VGSPVEAPPV	10	Unmodified	_VGSPVEAPPV_					0	0	0		ENST00000457665.5_1_22:38746576-38746807:-|nuORF	ENST00000457665.5_1_22:38746576-38746807:-|nuORF	ENST00000457665.5_1_22:38746576-38746807:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.2603759765625	2	476.260925	950.507297	-2.045	-0.00097393	0.34654	0.00016504	-1.6984	-0.00080889	476.2604363500765	17.455	0.22853	17.455	17.347	17.576	0					11	9	2	0	0	0	0.8608	1	209	209		34.173	0	1	33732			61075	11983	40800	40816	69170	69170					0.030063651776117695
VGSQSVHISP	10	Unmodified	_VGSQSVHISP_					0	0	0			REV__nc|ENSG00000284762|O95263-2|PDE8B	REV__nc|ENSG00000284762|O95263-2|PDE8B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.27630615234375	2	505.766906	1009.51926	0.85684	0.00043336	2.6055	0.0013178	3.4623	0.0017511	505.7680579252283	19.316	0.58454	18.686	18.444	19.028	-0.6296					19	12	3	0	0	0	0.37624	1	545	545		19.104	4.2386	1	185660	+		61076	17984	40801	40817	69171	69171					0.014879819208090339
VGSRFRIG	8	Unmodified	_VGSRFRIG_					0	0	0			REV__ENST00000486335.1_1_2:74702161-74702799:-|nuORF	REV__ENST00000486335.1_1_2:74702161-74702799:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	446.25701904296875	2	446.261594	890.508634	-0.45611	-0.00020354	-2.1283	-0.00094979	-2.5844	-0.0011533	446.2604729765141	37.714	2.8181	38.027	36.261	39.079	0.31312					154	69	5	0	0	0	0.87064	1	3020	3020		29.15	0	1	3385700	+		61077	27550	40802	40818	69172	69172					0.059000440570343926
VGSYFSVK	8	Unmodified	_VGSYFSVK_					0	0	0		ENSG00000175471|ENST00000515393|MCTP1;nc|ENSG00000175471|Q6DN14-4|MCTP1;nc|ENSG00000175471|Q6DN14-2|MCTP1	ENSG00000175471|ENST00000515393|MCTP1	ENSG00000175471|ENST00000515393|MCTP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.775146484375	2	443.737086	885.459619	0.25622	0.00011369	-2.6888	-0.0011931	-2.4326	-0.0010794	443.7356764631571	21.096	0.52058	20.637	20.424	20.945	-0.4591					19	11	2	0	0	0	0.4196	1	754	754		7.1934	0	1	27856			61078	7019	40803	40819	69173	69173					0.01230710977426952
VGTELLLAL	9	Unmodified	_VGTELLLAL_					0	0	0		ENSG00000108582|ENST00000225719|CPD;nc|ENSG00000108582|O75976-2|CPD	ENSG00000108582|ENST00000225719|CPD	ENSG00000108582|ENST00000225719|CPD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7906494140625	2	464.789318	927.564084	0.17035	7.9177E-05	2.8409	0.0013204	3.0113	0.0013996	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.7932	1	1708	1708		26.796	2.5934	1	283920			61079	2419	40804	40820	69174	69174					0.09740412734140591
VGTINLKLTF	10	Unmodified	_VGTINLKLTF_					0	0	0		ENST00000426654.6_1_16:69726822-69726870:+|nuORF	ENST00000426654.6_1_16:69726822-69726870:+|nuORF	ENST00000426654.6_1_16:69726822-69726870:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.33251953125	2	553.334424	1104.6543	0.81959	0.00045351	-4.4582	-0.0024669	-3.6386	-0.0020134	553.3317918445606	96.793	1.7474	96.956	96.403	98.15	0.16317					118	40	4	0	0	0	0.86348	1	9985	9985		31.53	7.0106	1	2701500			61080	11560	40805	40821	69175	69175					0.10615462062560255
VGTLLSDI	8	Unmodified	_VGTLLSDI_					0	0	0		nc|ENSG00000167286|P04234-2|CD3D;ENSG00000167286|ENST00000300692|CD3D	nc|ENSG00000167286|P04234-2|CD3D	nc|ENSG00000167286|P04234-2|CD3D	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	409.29248046875	2	409.236919	816.459284	0.87606	0.00035852	2.8976	0.0011858	3.7736	0.0015443	409.23821696642943	23.418	0.55433	22.844	22.497	23.052	-0.57415					15	12	2	0	0	0	0.4196	1	1008	1008		12.959	4.7279	1	27777			61081	6284	40806	40822	69176	69176					0.04371291257575649
VGTTGILLGN	10	Unmodified	_VGTTGILLGN_					0	0	0			REV__ENSG00000170677|ENST00000397942|SOCS6	REV__ENSG00000170677|ENST00000397942|SOCS6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2876281738281	2	472.7742	943.533846	1.4283	0.00067525	-0.44285	-0.00020937	0.98542	0.00046588	472.7739061119745	94.801	0.25882	95.234	95.024	95.283	0.4324					7	5	2	0	0	0	0.37624	1	11297	11297		17.468	0	1	58295	+		61082	21680	40807	40823	69177	69177					0.05982054068965681
VGVCVLRP	8	Unmodified	_VGVCVLRP_					0	0	0			REV__ENST00000504102.5_1_17:47755419-47755581:-|nuORF	REV__ENST00000504102.5_1_17:47755419-47755581:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7516784667969	2	421.749473	841.484393	2.261	0.00095358	2.5621	0.0010806	4.8232	0.0020342	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.86288	1	7497	7497		26.796	1.3459	1	532850	+		61083	27852	40808	40824	69178	69178					0.05731067579142746
VGVEEGLV	8	Unmodified	_VGVEEGLV_					0	0	0		nc|ENSG00000258436|Q7Z5J4-2|RAI1;ENSG00000108557|ENST00000353383|RAI1;nc|ENSG00000258436|Q7Z5J4-3|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	nc|ENSG00000258436|Q7Z5J4-2|RAI1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	401.221923828125	2	401.221268	800.427984	-0.013517	-5.4231E-06	2.3488	0.00094239	2.3353	0.00093697	401.22210979788366	30.801	0.998	30.805	30.404	31.402	0.0037212					34	22	2	0	0	0	0.92176	2	2061	2061;2074		54.765	0.81448	1	355010			61084	2417	40809	40825	69179;69180	69179					0.01978718223483611
VGVKAGRPG	9	Unmodified	_VGVKAGRPG_					0	0	0			REV__ENST00000456324.5_1_19:36706070-36719666:+|nuORF	REV__ENST00000456324.5_1_19:36706070-36719666:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.75384521484375	2	420.756144	839.497735	-2.163	-0.00091008	-0.04622	-1.9447E-05	-2.2092	-0.00092953	420.7559301673431	20.73	1.3575	20.73	19.75	21.107	0					81	64	2	0	0	0	0.7932	1	525	525		17.365	2.7009	1	64367	+		61085	26954	40810	40826	69181	69181					0.07156641682752252
VGVLAPKRQRG	11	Unmodified	_VGVLAPKRQRG_					0	0	0		ENST00000310924.6_1_17:77911334-77911703:-|nuORF	ENST00000310924.6_1_17:77911334-77911703:-|nuORF	ENST00000310924.6_1_17:77911334-77911703:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.866943359375	2	590.867289	1179.72002	-1.319	-0.00077937	-0.16176	-9.558E-05	-1.4808	-0.00087495	590.8672484650382	103.35	3.8149	103.47	103.03	106.84	0.11495					316	94	6	0	0	0	0.72228	1	11016	11016		27.882	0	1	81379000			61086	9913	40811	40827	69182	69182					0.13735296028107769
VGVPPLTE	8	Unmodified	_VGVPPLTE_					0	0	0			REV__nc|ENSG00000119673|P49753-2|ACOT2	REV__nc|ENSG00000119673|P49753-2|ACOT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.24847412109375	2	406.231636	810.448719	0.62267	0.00025295	4.3653	0.0017733	4.988	0.0020263	406.233531756746	88.411	0.72627	88.561	88.284	89.01	0.15055					25	17	3	0	0	0	0.4196	1	8797	8797		26.796	6.3143	1	605960	+		61087	18366	40812	40828	69183	69183					0.03591308603120069
VGVPPLTE	8	Unmodified	_VGVPPLTE_					0	0	0			REV__nc|ENSG00000119673|P49753-2|ACOT2	REV__nc|ENSG00000119673|P49753-2|ACOT2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	406.231636	810.448719	-0.18706	-7.5988E-05	4.7008	0.0019096	4.5138	0.0018336	406.2319153106751	88.599	0.73421	88.667	88.18	88.914	0.068161	-0.014693	-0.0022996	NaN	26.796	30	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	246990	+		61088	18366	40812	40828							0.03591308603120069
VGVPPLTE	8	Unmodified	_VGVPPLTE_					0	0	0			REV__nc|ENSG00000119673|P49753-2|ACOT2	REV__nc|ENSG00000119673|P49753-2|ACOT2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.231636	810.448719	-1.8139	-0.00073685	8.1904	0.0033272	6.3765	0.0025903	406.2335996513922	88.563	0.521	88.77	88.352	88.873	0.20731	0.087819	0.00053555	NaN	26.796	21	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	201250	+		61089	18366	40812	40828							0.03591308603120069
VGVPPLTE	8	Unmodified	_VGVPPLTE_					0	0	0			REV__nc|ENSG00000119673|P49753-2|ACOT2	REV__nc|ENSG00000119673|P49753-2|ACOT2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	406.231636	810.448719	-1.2452	-0.00050582	5.879	0.0023882	4.6338	0.0018824	406.23449719230047	88.267	0.55267	88.73	88.595	89.147	0.46312	0.047821	-0.0013424	NaN	26.796	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191160	+		61090	18366	40812	40828							0.03591308603120069
VGVRIQQTG	9	Unmodified	_VGVRIQQTG_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.2781066894531	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.78058	1	8559	8559		30.504	2.6214	1	6593200	+		61091	20903	40813	40829	69184	69184					0.060319920203255606
VGVRSRSL	8	Unmodified	_VGVRSRSL_					0	0	0		ENSG00000275793|ENST00000619918|RIMBP3;ENSG00000274600|ENST00000620804|RIMBP3B;ENSG00000183246|ENST00000433039|RIMBP3C	ENSG00000275793|ENST00000619918|RIMBP3	ENSG00000275793|ENST00000619918|RIMBP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2650451660156	2	437.266876	872.519199	-1.6247	-0.00071044	-1.1033	-0.00048243	-2.728	-0.0011929	437.26636390033156	24.021	1.8701	24.079	23.417	25.287	0.058165					191	86	4	0	0	0	0.87479	1	862	862		30.504	3.7075	1	2248600			61092	7511	40814	40830	69185	69185					0.0778402671146523
VGVRSRSL	8	Unmodified	_VGVRSRSL_					0	0	0		ENSG00000275793|ENST00000619918|RIMBP3;ENSG00000274600|ENST00000620804|RIMBP3B;ENSG00000183246|ENST00000433039|RIMBP3C	ENSG00000275793|ENST00000619918|RIMBP3	ENSG00000275793|ENST00000619918|RIMBP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2659912109375	2	437.266876	872.519199	0.044355	1.9395E-05	-2.8438	-0.0012435	-2.7995	-0.0012241	437.26562029129207	23.787	1.9639	23.882	23.206	25.169	0.094501					226	94	5	0	0	0	0.84341	1	815	815		24.203	4.8428	1	2622700			61093	7511	40814	40830	69186	69186					0.0778402671146523
VGVSRTRV	8	Unmodified	_VGVSRTRV_					0	0	0			REV__ENSG00000168916|ENST00000513986|ZNF608	REV__ENSG00000168916|ENST00000513986|ZNF608	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2655029296875	2	437.266876	872.519199	0.051124	2.2355E-05	-3.1793	-0.0013902	-3.1282	-0.0013678	437.26563820123806	25.538	2.1653	25.281	24.501	26.666	-0.25721					170	48	6	0	0	0	0.87276	1	1439	1439		29.842	0	1	21512000	+		61094	21532	40815	40831	69187	69187					0.0778402671146523
VGVVYGVI	8	Unmodified	_VGVVYGVI_					0	0	0		ENSG00000090020|ENST00000263980|SLC9A1;nc|ENSG00000090020|P19634-2|SLC9A1	ENSG00000090020|ENST00000263980|SLC9A1	ENSG00000090020|ENST00000263980|SLC9A1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2449035644531	2	403.244547	804.47454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.94	1	118.92	118.42	119.42	-0.024208								0	0	0	0.29725	1	13179	13179		24.504	0	1				61095	1636	40816	40832	69188	69188					0.06448202845422202
VGVWPVLGR	9	Unmodified	_VGVWPVLGR_					0	0	0			REV__MLT1H1_dup140|chr1:144208113-144208543:-|1.0196872721105164|0.286716771863292|1.83|61.0|16|1|anti-sense	REV__MLT1H1_dup140|chr1:144208113-144208543:-|1.0196872721105164|0.286716771863292|1.83|61.0|16|1|anti-sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79583740234375	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.7932	1	4291	4291		26.796	0	1	748320	+		61096	29660	40817	40833	69189	69189					0.08446074267999393
VGYFVLAVRAL	11	Unmodified	_VGYFVLAVRAL_					0	0	0			REV__ENSG00000143315|ENST00000368090|PIGM	REV__ENSG00000143315|ENST00000368090|PIGM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.246826171875	3	403.24477	1206.71248	2.718	0.001096	2.5029	0.0010093	5.2209	0.0021053	403.2457429043833	104.67	4.1068	104.63	103.57	107.67	-0.04039					327	97	7	0	0	0	0.76251	1	11583	11583		19.263	0	1	15597000	+		61097	19789	40818	40834	69190	69190					0.11739143707859512
VHAHTPHTLT	10	Unmodified	_VHAHTPHTLT_					0	0	0		ENST00000403681.6_2_12:66218024-66218900:+|nuORF	ENST00000403681.6_2_12:66218024-66218900:+|nuORF	ENST00000403681.6_2_12:66218024-66218900:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	556.2982788085938	2	557.293622	1112.57269	0.56973	0.00031751	1.3508	0.0007528	1.9205	0.0010703	557.2929667091964	68.728	0.11224	68.857	68.812	68.924	0.12839					6	4	2	0	0	0	0.37624	1	6199	6199		15.642	3.435	1	22630			61098	11253	40819	40835	69191	69191					0.020907794233153254
VHALKRLRDS	10	Unmodified	_VHALKRLRDS_					0	0	0		ENST00000407117.6_1_22:38234565-38240173:-|nuORF;ENSG00000100124|ENST00000215941|ANKRD54	ENST00000407117.6_1_22:38234565-38240173:-|nuORF	ENST00000407117.6_1_22:38234565-38240173:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8558349609375	2	597.856921	1193.69929	-0.35529	-0.00021242	-0.43374	-0.00025932	-0.78904	-0.00047173	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.86471	1	9232	9232		30.318	0	1	1224100			61099	1799	40820	40836	69192	69192					0.11018705648461946
VHARLHAVQ	9	Unmodified	_VHARLHAVQ_					0	0	0			REV__ENSG00000113916|ENST00000406870|BCL6;REV__ENSG00000161940|ENST00000293805|BCL6B	REV__ENSG00000113916|ENST00000406870|BCL6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7931518554688	2	515.798875	1029.5832	1.4501	0.00074797	-1.0702	-0.00055202	0.3799	0.00019595	516.2995213738423	87.898	0.30431	87.824	87.638	87.942	-0.074005					7	6	2	0	0	0	0.20789	1	9103	9103		21.96	0	1	43175	+		61100	18022;20785	40821	40837	69193	69193					0.06958806868419742
VHCCGPVV	8	Unmodified	_VHCCGPVV_					0	0	0			REV__ENST00000494263.5_1_2:219679754-219679922:+|nuORF	REV__ENST00000494263.5_1_2:219679754-219679922:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2571716308594	2	407.190934	812.367315	-0.14795	-6.0245E-05	-1.6248	-0.00066161	-1.7728	-0.00072185	407.19187048994036	55.796	0.21798	55.786	55.651	55.869	-0.010136					9	6	2	0	0	0	0.4196	1	4978	4978		16.705	0	1	29066	+		61101	27714	40822	40838	69194	69194					-0.046374136320991965
VHFEQIKCN	9	Unmodified	_VHFEQIKCN_					0	0	0			REV__nc|ENSG00000107290|Q7Z333-3|SETX	REV__nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	559.2744140625	2	559.276583	1116.53861	-1.2644	-0.00070716	-2.9463	-0.0016478	-4.2107	-0.0023549	559.274718637876	44.23	0.84392	44.23	43.858	44.702	0					38	19	3	0	0	0	0.6204	1	3183	3183		45.972	3.108	1	246890	+		61102	17654	40823	40839	69195	69195					-0.014993850599239522
VHFQDNHGVTV	11	Unmodified	_VHFQDNHGVTV_					0	0	0		nc|ENSG00000146426|Q8IVF5-4|TIAM2;ENSG00000146426|ENST00000682666|TIAM2;nc|ENSG00000146426|Q8IVF5-5|TIAM2;nc|ENSG00000146426|Q8IVF5-2|TIAM2	nc|ENSG00000146426|Q8IVF5-4|TIAM2	nc|ENSG00000146426|Q8IVF5-4|TIAM2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.8056640625	2	626.807094	1251.59963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.349	1	30.461	29.961	30.961	0.11225								0	0	0	0.56276	1	1342	1342		29.17	2.374	1				61103	4846	40824	40840	69196	69196					-0.016101567561463526
VHFRNLLL	8	Unmodified	_VHFRNLLL_					0	0	0			REV__ENSG00000077235|ENST00000356183|GTF3C1	REV__ENSG00000077235|ENST00000356183|GTF3C1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.2372131347656	2	506.308544	1010.60253	0.24276	0.00012291	2.9636	0.0015005	3.2064	0.0016234	506.3093858059183	60.234	0.57351	60.787	60.463	61.037	0.55323					25	15	3	0	0	0	0.4196	1	6399	6399		8.8223	0	1	259220	+		61104	16739	40825	40841	69197	69197					0.09765763159327889
VHGAVAFV	8	Unmodified	_VHGAVAFV_					0	0	0			REV__ENST00000225308.12_1_17:42397045-42397120:-|nuORF	REV__ENST00000225308.12_1_17:42397045-42397120:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.2254943847656	2	400.226688	798.438824	0.71326	0.00028547	2.1521	0.00086135	2.8654	0.0011468	400.22763665740666	50.309	0.69075	51.154	50.934	51.625	0.84501					24	16	2	0	0	0	0.80127	1	4971	4971		16.705	0	1	832990	+		61105	24174	40826	40842	69198	69198					0.0315416538842328
VHGGGGGG	8	Unmodified	_VHGGGGGG_					0	0	0		ENST00000601673.1_7:6523004-6523760:+|nuORF	ENST00000601673.1_7:6523004-6523760:+|nuORF	ENST00000601673.1_7:6523004-6523760:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.7844848632812	1	597.273949	596.266673	-0.56526	-0.00033761	-1	-0.00059729	-1.5653	-0.0009349	597.2732585698234	58.443	4.568	58.429	56.569	61.137	-0.013668					252	149	2	0	0	0	0.4196	1	5675	5675		10.185	0	1	311590			61106	14392	40827	40843	69199	69199					-0.04760986299083925
VHGGLINK	8	Unmodified	_VHGGLINK_					0	0	0		ENSG00000108518|ENST00000225655|PFN1	ENSG00000108518|ENST00000225655|PFN1	ENSG00000108518|ENST00000225655|PFN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.2508239746094	2	419.250695	836.486836	1.0523	0.00044116	-0.96885	-0.00040619	0.083413	3.4971E-05	419.2501531023733	23.766	1.2209	23.385	22.887	24.108	-0.38178					65	27	4	0	0	0	0.10112	4	1079	1068;1079;1091;1103		119.22	0	1	1322000			61107	2413	40828	40844	69200;69201;69202;69203	69201					0.06205239308462751
VHGGLINK	8	Unmodified	_VHGGLINK_					0	0	0		ENSG00000108518|ENST00000225655|PFN1	ENSG00000108518|ENST00000225655|PFN1	ENSG00000108518|ENST00000225655|PFN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.2508850097656	2	419.250695	836.486836	1.312	0.00055007	-1.2879	-0.00053996	0.024104	1.0106E-05	419.2500422935716	23.688	1.1551	23.114	22.664	23.819	-0.57415					40	26	2	0	0	0	0.10112	4	1082	1070;1082;1094;1107		119.22	0	1	1428200			61108	2413	40828	40844	69204;69205;69206;69207	69205					0.06205239308462751
VHGHRVRP	8	Unmodified	_VHGHRVRP_					0	0	0			REV__ENST00000601816.3_1_19:50364595-50365005:-|nuORF	REV__ENST00000601816.3_1_19:50364595-50365005:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2775573730469	2	479.278109	956.541666	-1.4767	-0.00070776	-0.10576	-5.0691E-05	-1.5825	-0.00075845	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.86288	1	7955	7955		26.796	0.10319	1	1785900	+		61109	29324	40829	40845	69208	69208					0.06165670899747511
VHGHRVRP	8	Unmodified	_VHGHRVRP_					0	0	0			REV__ENST00000601816.3_1_19:50364595-50365005:-|nuORF	REV__ENST00000601816.3_1_19:50364595-50365005:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774353027344	2	479.278109	956.541666	-1.5678	-0.00075141	0.082291	3.944E-05	-1.4855	-0.00071197	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.884	1	8073	8073		33.516	1.9858	1	6441000	+		61110	29324	40829	40845	69209	69209					0.06165670899747511
VHGNKLKT	8	Unmodified	_VHGNKLKT_					0	0	0			REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28	REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.78759765625	2	448.769252	895.52395	-1.179	-0.00052911	0.0742	3.3299E-05	-1.1048	-0.00049581	448.7688651301606	38.554	0.28541	38.896	38.737	39.022	0.34187					9	6	2	0	0	0	0.4196	1	3167	3167		7.6903	0	1	23592	+		61111	23670	40830	40846	69210	69210					0.07200910854237463
VHGPVVPK	8	Unmodified	_VHGPVVPK_					0	0	0			REV__ENSG00000189283|ENST00000492590|FHIT	REV__ENSG00000189283|ENST00000492590|FHIT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	416.7548522949219	2	416.755613	831.496673	-1.8373	-0.00076571	0.26309	0.00010964	-1.5742	-0.00065607	416.7557703392063	69.009	0.92305	69.144	68.682	69.606	0.13521					98	39	4	0	0	0	0.88915	1	6250	6250		35.201	12.164	1	1065300	+		61112	23075	40831	40847	69211	69211					0.07418427313848497
VHGRGGRHL	9	Unmodified	_VHGRGGRHL_					0	0	0		nc|ENSG00000012779|P09917-4|ALOX5	nc|ENSG00000012779|P09917-4|ALOX5	nc|ENSG00000012779|P09917-4|ALOX5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.77996826171875	2	494.781016	987.54748	-0.60525	-0.00029947	-0.9975	-0.00049354	-1.6027	-0.00079301	494.7803656183054	83.829	2.2213	83.994	82.644	84.865	0.1651					103	51	3	0	0	0	0.69914	1	8168	8168		40.573	4.1259	1	285340			61113	14739	40832	40848	69212	69212					0.05320769411423498
VHGSHLFR	8	Unmodified	_VHGSHLFR_					0	0	0			REV__nc|ENSG00000181085|Q8TD08-2|MAPK15	REV__nc|ENSG00000181085|Q8TD08-2|MAPK15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.75823974609375	2	476.759218	951.503883	0.68171	0.00032501	-1.7665	-0.0008422	-1.0848	-0.00051719	476.75824175786755	24.056	0.67372	24.112	23.761	24.435	0.055487					25	15	2	0	0	0	0.90465	1	852	852		40.573	8.6178	1	95082	+		61114	22441	40833	40849	69213	69213					0.0261915991427486
VHHLLNLTQPK	11	Unmodified	_VHHLLNLTQPK_					0	0	0		nc|ENSG807|P61550|ERVS71-1	nc|ENSG807|P61550|ERVS71-1	nc|ENSG807|P61550|ERVS71-1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7791748046875	3	433.922578	1298.7459	-1.8552	-0.00080499	4.2713	0.0018534	2.4162	0.0010484	433.9242864087894	42.203	0.39551	42.617	42.389	42.784	0.4139					13	9	2	0	0	0	0.17273	1	3734	3734		12.957	0	1	252020			61115	15359	40834	40850	69214	69214					0.10848145479735649
VHHPARRP	8	Unmodified	_VHHPARRP_					0	0	0		ENSG00000155714|ENST00000424898|PDZD9;nc|ENSG00000155714|Q8IXQ8-2|PDZD9;nc|ENSG00000155714|Q8IXQ8-3|PDZD9	ENSG00000155714|ENST00000424898|PDZD9	ENSG00000155714|ENST00000424898|PDZD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.78607177734375	2	485.278109	968.541666	0.14457	7.0157E-05	4.2109	0.0020435	4.3555	0.0021136	485.2793907764451	31.339	1.203	31.343	30.84	32.043	0.0037212					62	27	4	0	0	0	0.86791	1	2098	2098		28.254	1.4582	1	2024500			61116	5336	40835	40851	69215	69215					0.056136708997428286
VHHRSVLV	8	Unmodified	_VHHRSVLV_					0	0	0			REV__nc|ENSG00000188026|Q5EBL4-2|RILPL1	REV__nc|ENSG00000188026|Q5EBL4-2|RILPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.7820739746094	2	473.782693	945.550834	0.85611	0.00040561	-0.33332	-0.00015792	0.52278	0.00024769	473.78229812116575	21.435	0.72224	21.503	21.23	21.953	0.068251					45	22	3	0	0	0	0.87922	1	588	588		31.955	5.1588	1	91763	+		61117	22970	40836	40852	69216	69216					0.07588019465424622
VHHRSVLV	8	Unmodified	_VHHRSVLV_					0	0	0			REV__nc|ENSG00000188026|Q5EBL4-2|RILPL1	REV__nc|ENSG00000188026|Q5EBL4-2|RILPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.7823791503906	2	473.782693	945.550834	-0.42615	-0.0002019	0.84378	0.00039977	0.41763	0.00019787	473.7828976830325	21.758	0.79819	21.7	21.484	22.282	-0.057203					55	31	3	0	0	0	0.86791	1	624	624		28.254	4.0515	1	107510	+		61118	22970	40836	40852	69217	69217					0.07588019465424622
VHIFADPPLF	10	Unmodified	_VHIFADPPLF_					0	0	0			REV__ENSG00000171124|ENST00000303225|FUT3;REV__ENSG00000156413|ENST00000318336|FUT6	REV__ENSG00000156413|ENST00000318336|FUT6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3108520507812	2	578.313492	1154.61243	-0.93812	-0.00054253	-4.1401	-0.0023943	-5.0782	-0.0029368	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.86201	1	12098	12098		24.203	2.2429	1	3649700	+		61119	18873;20484	40837	40853	69218	69218					0.041309063740072816
VHIFALKDTRL	11	Unmodified	_VHIFALKDTRL_					0	0	0		ENSG00000196998|ENST00000376372|WDR45;nc|ENSG00000196998|Q9Y484-3|WDR45;nc|ENSG00000196998|Q9Y484-2|WDR45;ENST00000480412.2_1_X:48933021-48933502:-|nuORF	ENSG00000196998|ENST00000376372|WDR45	ENSG00000196998|ENST00000376372|WDR45	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2625732421875	3	438.262712	1311.76631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.973	1	45.944	45.444	46.444	-0.028782								0	0	0	0.56276	1	3752	3752		25.126	0.89417	1				61120	8121	40838	40854	69219	69219					0.12289316139549555
VHIKNLPSLFK	11	Unmodified	_VHIKNLPSLFK_					0	0	0		ENSG00000124571|ENST00000265351|XPO5;ENST00000455854.2_1_6:43491608-43492751:-|nuORF	ENSG00000124571|ENST00000265351|XPO5	ENSG00000124571|ENST00000265351|XPO5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.59759521484375	3	432.599324	1294.77614	-1.5719	-0.00068002	-2.1954	-0.00094973	-3.7673	-0.0016298	432.5984109358272	105.99	1.0468	106.14	105.65	106.69	0.14843					117	25	6	0	0	0	0.77061	1	11378	11378		15.921	0.58318	1	44749000			61121	3343	40839	40855	69220	69220					0.14054504144905877
VHILPSPPPPS	11	Unmodified	_VHILPSPPPPS_					0	0	0		nc|ENSG00000080603|Q6ZRS2-3|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	nc|ENSG00000080603|Q6ZRS2-3|SRCAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	570.8255004882812	2	570.824224	1139.63389	0.28979	0.00016542	0.98882	0.00056444	1.2786	0.00072986	570.8247161195649	58.881	1.0315	59.435	59.047	60.079	0.55323					56	25	3	0	0	0	0.68378	1	6217	6217		34.173	2.2177	1	762650			61122	1447	40840	40856	69221	69221					0.06966291402773095
VHIWTWKR	8	Unmodified	_VHIWTWKR_					0	0	0		ENSG00000154485|ENST00000368808|MMP21	ENSG00000154485|ENST00000368808|MMP21	ENSG00000154485|ENST00000368808|MMP21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	563.8217163085938	2	563.319443	1124.62433	0.30712	0.00017301	3.4082	0.0019199	3.7154	0.0020929	563.8227203388345	27.372	0.11368	27.441	27.344	27.458	0.06868					6	5	2	0	0	0	0.86288	1	1082	1082		26.796	2.2769	1	128240			61123	5281	40841	40857	69222	69222					0.06700567907887489
VHKALWKT	8	Unmodified	_VHKALWKT_					0	0	0		ENSG00000065328|ENST00000378714|MCM10;nc|ENSG00000065328|Q7L590|MCM10;chr10:13172480-13172625|53|17.04|0.28|5.91|+|ENST00000484800|MCM10,MCM10	ENSG00000065328|ENST00000378714|MCM10	ENSG00000065328|ENST00000378714|MCM10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79522705078125	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.80514	1	4721	4721		19.104	2.6304	1	1759500			61124	67	40842	40858	69223	69223					0.08446074267999393
VHKCPVIHL	9	Unmodified	_VHKCPVIHL_					0	0	0			REV__ENSG00000127578|ENST00000319070|WFIKKN1	REV__ENSG00000127578|ENST00000319070|WFIKKN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.302734375	2	523.302404	1044.59026	-0.50611	-0.00026485	2.6774	0.0014011	2.1712	0.0011362	523.3036624822045	86.324	3.0084	86.778	84.918	87.927	0.4543					240	73	4	0	0	0	0.78851	1	9956	9956		28.254	2.6802	1	3970100	+		61125	18741	40843	40859	69224	69224					0.06974403424624143
VHKKAPQQ	8	Unmodified	_VHKKAPQQ_					0	0	0		nc|ENSG00000161681|Q9Y566-2|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1;ENSG00000161681|ENST00000293441|SHANK1	nc|ENSG00000161681|Q9Y566-2|SHANK1	nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2750549316406	2	468.274701	934.534849	-0.011912	-5.5783E-06	-0.1638	-7.6704E-05	-0.17571	-8.2282E-05	468.27447497985736	17.056	0.43213	16.974	16.764	17.196	-0.0821					39	17	3	0	0	0	0.89494	1	201	201		37.159	3.6435	1	135040			61126	5650	40844	40860	69225	69225					0.06496313228512918
VHKKLKSELW	10	Unmodified	_VHKKLKSELW_					0	0	0		nc|ENSG00000120733|Q7LBC6-2|KDM3B;ENSG00000120733|ENST00000314358|KDM3B;nc|ENSG00000120733|Q7LBC6-3|KDM3B;ENST00000505756.1_1_5:137759865-137761276:+|nuORF	nc|ENSG00000120733|Q7LBC6-2|KDM3B	nc|ENSG00000120733|Q7LBC6-2|KDM3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.376953125	2	634.379697	1266.74484	-0.13787	-8.7463E-05	-3.847	-0.0024405	-3.9849	-0.0025279	634.377061455115	118.49	0.49898	118.42	118.19	118.69	-0.07531					48	18	4	0	0	0	0.86763	1	12741	12741		26.693	1.1189	1	1728300			61127	3150	40845	40861	69226	69226					0.12213931110863996
VHKKLKSELW	10	Unmodified	_VHKKLKSELW_					0	0	0		nc|ENSG00000120733|Q7LBC6-2|KDM3B;ENSG00000120733|ENST00000314358|KDM3B;nc|ENSG00000120733|Q7LBC6-3|KDM3B;ENST00000505756.1_1_5:137759865-137761276:+|nuORF	nc|ENSG00000120733|Q7LBC6-2|KDM3B	nc|ENSG00000120733|Q7LBC6-2|KDM3B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3732299804688	2	634.379697	1266.74484	-1.1775	-0.000747	-2.9159	-0.0018498	-4.0934	-0.0025968	634.377772508187	111.36	0.34248	111.34	111.22	111.56	-0.019882					23	12	2	0	0	0	0.8651	1	11859	11859		25.574	1.0549	1	3757500			61128	3150	40845	40861	69227	69227					0.12213931110863996
VHKLKTLDLKG	11	Unmodified	_VHKLKTLDLKG_					0	0	0			REV__nc|ENSG00000165732|Q9NR30-2|DDX21	REV__nc|ENSG00000165732|Q9NR30-2|DDX21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3910522460938	2	626.392805	1250.77106	2.3084	0.0014459	4.3102	0.0026999	6.6186	0.0041458	626.3953217408156	109.92	1.4097	109.98	109.55	110.95	0.06794					99	57	2	0	0	0	0.73893	1	13319	13319		24.519	1.9395	1	615360	+		61129	21212	40846	40862	69228	69228					0.15570200282309088
VHKLPGPAPP	10	Unmodified	_VHKLPGPAPP_					0	0	0			REV__ENST00000310942.8_1_17:77759703-77759895:+|nuORF	REV__ENST00000310942.8_1_17:77759703-77759895:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8009033203125	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.705	1	53.7	53.2	54.2	-0.0053711								0	0	0	0.45132	1	4708	4708		24.203	1.1603	1		+		61130	24897	40847	40863	69229	69229					0.08122056922411502
VHKNLLRHLS	10	Unmodified	_VHKNLLRHLS_					0	0	0			REV__ENSG00000177465|ENST00000326303|ACOT4	REV__ENSG00000177465|ENST00000326303|ACOT4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2477111816406	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.85	1	114.88	114.38	115.38	0.026466								0	0	0	0.45132	1	12584	12584		17.468	0.75062	1		+		61131	22206	40848	40864	69230	69230					0.12079296028127828
VHKQLLALSVG	11	Unmodified	_VHKQLLALSVG_					0	0	0			REV__ENST00000595531.5_1_2:105883140-105883392:-|nuORF	REV__ENST00000595531.5_1_2:105883140-105883392:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.8405151367188	2	582.858598	1163.70264	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.285	1	15.334	14.834	15.834	0.04908								0	0	0	0.56276	1	30	30		19.997	1.7347	1		+		61132	29249	40849	40865	69231	69231					0.1273395570244702
VHKTIRRELN	10	Unmodified	_VHKTIRRELN_					0	0	0		ENSG00000165943|ENST00000298894|MOAP1	ENSG00000165943|ENST00000298894|MOAP1	ENSG00000165943|ENST00000298894|MOAP1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3792724609375	2	633.375478	1264.7364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.297	1	58.384	57.884	58.884	0.087002								0	0	0	0.45132	1	4952	4952		30.318	4.7437	1				61133	6141	40850	40866	69232	69232					0.11462377194243345
VHLAFLRLL	9	Unmodified	_VHLAFLRLL_					0	0	0		ENST00000487010.1_1_2:189875322-189876497:+|nuORF;nc|ENSG00000168542|P02461-2|COL3A1;ENSG00000168542|ENST00000304636|COL3A1	ENST00000487010.1_1_2:189875322-189876497:+|nuORF	ENST00000487010.1_1_2:189875322-189876497:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.34814453125	2	541.347669	1080.68079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.593	1	41.548	41.048	42.048	-0.045467								0	0	0	0.31472	1	2728	2728		25.45	1.2474	1				61134	6411	40851	40867	69233	69233					0.14367195744557648
VHLFPVKFF	9	Unmodified	_VHLFPVKFF_					0	0	0			REV__ENST00000526627.1_1_5:150175531-150175765:+|nuORF	REV__ENST00000526627.1_1_5:150175531-150175765:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.330810546875	2	567.328945	1132.64334	2.9351	0.0016651	-1.1582	-0.00065708	1.7769	0.0010081	567.3281367260898	114.07	0.9398	114.04	113.65	114.59	-0.024452					66	32	3	0	0	0	0.7932	1	12645	12645		26.796	3.7536	1	557170	+		61135	28215	40852	40868	69234	69234					0.08232104478929614
VHLFPVKFF	9	Unmodified	_VHLFPVKFF_					0	0	0			REV__ENST00000526627.1_1_5:150175531-150175765:+|nuORF	REV__ENST00000526627.1_1_5:150175531-150175765:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.8331298828125	2	567.328945	1132.64334	-1.3958	-0.00079186	3.6065	0.0020461	2.2108	0.0012542	567.3311039510933	119.47	0.78794	119.38	119.11	119.89	-0.088509					27	19	2	0	0	0	0.20789	1	12941	12941		7.6903	0	1	34626	+		61136	28215	40852	40868	69235	69235					0.08232104478929614
VHLFPVKFF	9	Unmodified	_VHLFPVKFF_					0	0	0			REV__ENST00000526627.1_1_5:150175531-150175765:+|nuORF	REV__ENST00000526627.1_1_5:150175531-150175765:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3306274414062	2	567.328945	1132.64334	1.203	0.00068247	1.7348	0.00098418	2.9377	0.0016667	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.7932	1	10680	10680		8.2313	0.54101	1	4990000	+		61137	28215	40852	40868	69236	69236					0.08232104478929614
VHLIIGNG	8	Unmodified	_VHLIIGNG_					0	0	0			REV__nc|ENSG00000184321|Q9H342|OR51J1	REV__nc|ENSG00000184321|Q9H342|OR51J1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.5840759277344	2	411.745245	821.475937	1.1965	0.00049264	0.13735	5.6555E-05	1.3338	0.00054919	411.7448604918633	25.293	0.7811	24.965	24.613	25.394	-0.32825					29	17	3	0	0	0	0.4196	1	1326	1326		12.959	0	1	203610	+		61138	30093	40853	40869	69237	69237					0.05805836934189301
VHLMLVGT	8	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))VHLM(Oxidation (M))LVGT_		VHLM(1)LVGT		VHLM(57)LVGT	1	0	1		ENST00000373674.3_1_6:36922354-36922558:+|nuORF	ENST00000373674.3_1_6:36922354-36922558:+|nuORF	ENST00000373674.3_1_6:36922354-36922558:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2537841796875	2	464.252046	926.489538	0.72749	0.00033774	3.541	0.0016439	4.2685	0.0019816	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.89567	1	8526	8526		57.453	12.922	1	1578600			61139	10752	40854	40870	69238	69238		176			0.02335326651120795
VHLMLVGT	8	Unmodified	_VHLMLVGT_					0	0	0		ENST00000373674.3_1_6:36922354-36922558:+|nuORF	ENST00000373674.3_1_6:36922354-36922558:+|nuORF	ENST00000373674.3_1_6:36922354-36922558:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2516784667969	2	435.249306	868.484059	1.6099	0.00070073	2.9528	0.0012852	4.5628	0.001986	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87276	1	8132	8132		29.842	1.5873	1	3370400			61140	10752	40854	40871	69239	69239					0.04455647859299461
VHLPLSAA	8	Unmodified	_VHLPLSAA_					0	0	0		ENSG00000187790|ENST00000267430|FANCM;nc|ENSG00000187790|Q8IYD8-3|FANCM	ENSG00000187790|ENST00000267430|FANCM	ENSG00000187790|ENST00000267430|FANCM	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	404.92303466796875	2	404.239796	806.465038	-0.36185	-0.00014627	-0.68032	-0.00027501	-1.0422	-0.00042129	404.2398094321286	26.447	1.0447	26.408	25.825	26.87	-0.038523					42	23	3	0	0	0	0.4196	1	1208	1208		13.775	5.544	1	34054			61141	7881	40855	40872	69240	69240					0.05406434559893114
VHLTLLMYFV	10	Unmodified	_VHLTLLMYFV_					0	0	0			REV__nc|ENSG00000086991|Q9NPH5-5|NOX4	REV__nc|ENSG00000086991|Q9NPH5-5|NOX4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	618.3457641601562	2	618.346477	1234.6784	1.7831	0.0011026	-2.6244	-0.0016228	-0.84128	-0.0005202	618.3447766932444	97.715	2.3664	98.106	97.031	99.398	0.39065					180	57	4	0	0	0	0.84112	1	11746	11746		37.159	2.9866	1	974160	+		61142	16917	40856	40873	69241	69241					0.07044979224565395
VHLTLPDGT	9	Unmodified	_VHLTLPDGT_					0	0	0		ENSG00000147416|ENST00000276390|ATP6V1B2;ENST00000523482.5_1_8:20054917-20070443:+|nuORF	ENSG00000147416|ENST00000276390|ATP6V1B2	ENSG00000147416|ENST00000276390|ATP6V1B2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.759765625	2	476.758549	951.502546	-0.64938	-0.0003096	0.86844	0.00041404	0.21905	0.00010444	476.7588362397882	24.297	0.92221	24.253	23.91	24.832	-0.043222					40	20	3	0	0	0	0.72402	1	851	851		38.806	0	1	124730			61143	4900	40857	40874	69242	69242					0.024854810348642786
VHLTPEEK	8	Unmodified	_VHLTPEEK_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	476.7578430175781	2	476.758549	951.502546	0.68171	0.00032501	-0.3639	-0.00017349	0.31781	0.00015152	476.75824175786755	24.056	0.67372	24.112	23.761	24.435	0.055487					25	15	2	0	0	0	0.83456	2	841	841;864		60.972	18.497	1	95082			61144	8826	40858	40875	69243;69244	69243					0.0248548103485291
VHLTPEEK	8	Unmodified	_VHLTPEEK_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.7586669921875	2	476.758549	951.502546	-0.27895	-0.00013299	0.50648	0.00024147	0.22753	0.00010848	476.7586662154682	24.262	0.92163	24.216	23.918	24.84	-0.04598					41	20	3	0	0	0	0.48059	2	947	934;947		76.774	26.75	1	107860			61145	8826	40858	40875	69245;69246	69246					0.0248548103485291
VHLTPEEK	8	Unmodified	_VHLTPEEK_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.7586364746094	2	476.758549	951.502546	-0.64938	-0.0003096	0.86844	0.00041404	0.21905	0.00010444	476.7588362397882	24.297	0.92221	24.253	23.91	24.832	-0.043222					40	20	3	0	0	0	0.38363	2	875	860;875		90.777	10.837	1	124730			61146	8826	40858	40875	69247;69248	69248					0.0248548103485291
VHLTPEEK	8	Unmodified	_VHLTPEEK_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	476.758549	951.502546	-0.98321	-0.00046875	1.3403	0.00063901	0.3571	0.00017025	476.7592752059678	24.189	0.4118	24.247	24.084	24.496	0.058167	0.039762	0.00095005	NaN	90.777	23	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52496			61147	8826	40858	40875							0.0248548103485291
VHNLLRISVY	10	Unmodified	_VHNLLRISVY_					0	0	0		nc|ENSG00000085721|Q9NYV6-3|RRN3;ENSG00000085721|ENST00000198767|RRN3;ENST00000561685.1_1_16:15168568-15177423:-|nuORF;nc|ENSG00000085721|Q9NYV6-2|RRN3;nc|ENSG00000103472|A6NIE6|RRN3P2;ENST00000564580.5_1_16:29086353-29108616:+|nuORF;ENST00000427965.6_1_16:29086353-29124388:+|nuORF	nc|ENSG00000085721|Q9NYV6-3|RRN3	nc|ENSG00000085721|Q9NYV6-3|RRN3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.2400207519531	3	405.239907	1212.69789	-0.9621	-0.00038988	1.8579	0.00075288	0.89577	0.000363	405.24065528947847	103.14	0.51096	103.14	102.87	103.38	0					23	12	2	0	0	0	0.86225	1	10562	10562		32.751	2.1817	1	2123200			61148	1537	40859	40876	69249	69249					0.10005071559703538
VHPAGPLGPG	10	Unmodified	_VHPAGPLGPG_					0	0	0			REV__ENST00000441493.6_1_22:18272311-18272575:-|nuORF	REV__ENST00000441493.6_1_22:18272311-18272575:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.24822998046875	2	451.248152	900.481751	-1.4716	-0.00066404	2.9168	0.0013162	1.4452	0.00065215	451.24928193885836	68.02	1.4601	68.02	67.491	68.952	0					124	59	3	0	0	0	0.86786	1	6016	6016		26.796	3.7536	1	151770	+		61149	26758	40860	40877	69250	69250					0.02752935445869298
VHPAHKGFRH	10	Unmodified	_VHPAHKGFRH_					0	0	0			REV__ENSG00000183251|ENST00000380224|OR51B4	REV__ENSG00000183251|ENST00000380224|OR51B4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	593.3208618164062	2	593.323048	1184.63154	0.77271	0.00045847	-2.8697	-0.0017027	-2.097	-0.0012442	593.321294730997	41.341	1.0593	41.346	41.006	42.066	0.0043983					55	29	2	0	0	0	0.71042	1	2664	2664		44.117	3.3386	1	2399500	+		61150	22589	40861	40878	69251	69251					0.046613005083145254
VHPPVVNLN	9	Unmodified	_VHPPVVNLN_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.77886962890625	2	494.782359	987.550165	-0.60525	-0.00029947	-3.7112	-0.0018362	-4.3164	-0.0021357	494.7803656183054	83.829	2.2213	83.994	82.644	84.865	0.1651					103	51	3	0	0	0	0.72402	1	8150	8150		38.806	2.3594	1	285340	+		61151	20437;29946	40862	40879	69252	69252					0.0558918002569726
VHPRKLVY	8	Unmodified	_VHPRKLVY_					0	0	0			REV__ENST00000464255.1_1_2:219265892-219269145:+|nuORF	REV__ENST00000464255.1_1_2:219265892-219269145:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3070068359375	2	506.308544	1010.60253	-1.4611	-0.00073978	2.5766	0.0013046	1.1155	0.00056477	506.3097612037787	49.937	2.4728	49.937	48.626	51.099	0					96	60	2	0	0	0	0.83466	1	4017	4017		23.037	3.0399	1	143840	+		61152	19900	40863	40880	69253	69253					0.09765763159327889
VHPRKLVY	8	Unmodified	_VHPRKLVY_					0	0	0			REV__ENST00000464255.1_1_2:219265892-219269145:+|nuORF	REV__ENST00000464255.1_1_2:219265892-219269145:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3089904785156	2	506.308544	1010.60253	-0.22502	-0.00011393	0.83013	0.0004203	0.60511	0.00030637	506.3089485725691	49.441	1.8113	49.348	48.371	50.182	-0.093182					75	43	2	0	0	0	0.82464	1	3921	3921		21.702	0.7554	1	253850	+		61153	19900	40863	40880	69254	69254					0.09765763159327889
VHQPVGTL	8	Unmodified	_VHQPVGTL_					0	0	0			REV__ENSG00000006118|ENST00000453848|TMEM132A	REV__ENSG00000006118|ENST00000453848|TMEM132A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	425.74176025390625	2	425.742702	849.470852	0.53807	0.00022908	-1.714	-0.00072974	-1.176	-0.00050066	425.74185919539525	78.968	1.0574	79.107	78.795	79.853	0.13883					46	34	3	0	0	0	0.85277	1	7476	7476		25.45	0	1	211190	+		61154	16097	40864	40881	69255	69255					0.04009533071575788
VHQPVGTL	8	Unmodified	_VHQPVGTL_					0	0	0			REV__ENSG00000006118|ENST00000453848|TMEM132A	REV__ENSG00000006118|ENST00000453848|TMEM132A	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	425.742702	849.470852	-1.7268	-0.00073517	0.555	0.00023629	-1.1718	-0.00049889	425.74283630510183	79.031	1.0392	79.162	78.82	79.859	0.13086	0.027602	0.00094688	NaN	25.45	48	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	258580	+		61155	16097	40864	40881							0.04009533071575788
VHQPVGTL	8	Unmodified	_VHQPVGTL_					0	0	0			REV__ENSG00000006118|ENST00000453848|TMEM132A	REV__ENSG00000006118|ENST00000453848|TMEM132A	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	425.742702	849.470852	0.53807	0.00022908	-1.714	-0.00072974	-1.176	-0.00050066	425.74185919539525	78.968	1.0574	79.107	78.795	79.853	0.13883	-0.027602	-0.00098517	NaN	25.45	46	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211190	+		61156	16097	40864	40881							0.04009533071575788
VHQQPVPP	8	Unmodified	_VHQQPVPP_					0	0	0			REV__ENSG00000014164|ENST00000262577|ZC3H3	REV__ENSG00000014164|ENST00000262577|ZC3H3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.24554443359375	2	451.248152	900.481751	-1.2821	-0.00057856	2.6153	0.0011801	1.3331	0.00060157	451.2491871267672	67.547	1.2746	67.683	67.257	68.531	0.13522					88	48	2	0	0	0	0.87807	1	6030	6030		31.579	1.0753	1	186190	+		61157	16203	40865	40882	69256	69256					0.02752935445857929
VHRGQVRH	8	Unmodified	_VHRGQVRH_					0	0	0			REV__ENST00000460088.5_1_7:140396810-140402715:+|nuORF	REV__ENST00000460088.5_1_7:140396810-140402715:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.7825622558594	2	494.781016	987.54748	-0.60063	-0.00029718	-0.69279	-0.00034278	-1.2934	-0.00063996	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.86791	1	8353	8353		28.254	0.37203	1	707910	+		61158	26995	40866	40883	69257	69257					0.053207694114121296
VHRIEKAIMR	10	Unmodified	_VHRIEKAIMR_					0	0	0			REV__nc|ENSG00000109756|Q9Y4G8|RAPGEF2	REV__nc|ENSG00000109756|Q9Y4G8|RAPGEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.24920654296875	3	418.248408	1251.72339	1.1284	0.00047194	1.6899	0.00070678	2.8182	0.0011787	418.24909459803337	34.845	1.7351	35.055	34.234	35.969	0.21003					81	43	3	0	0	0	0.85086	1	2561	2561		19.263	0.73163	1	297670	+		61159	17771	40867	40884	69258	69258					0.10760222810449704
VHRIVGTN	8	Unmodified	_VHRIVGTN_					0	0	0			REV__ENST00000354500.6_1_9:73442757-73477826:-|nuORF	REV__ENST00000354500.6_1_9:73442757-73477826:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.2587585449219	2	448.259051	894.503549	-1.2915	-0.00057894	1.2791	0.00057339	-0.012395	-5.5564E-06	448.25951221432746	89.806	3.6834	90.019	87.898	91.582	0.21272					200	88	5	0	0	0	0.82658	2	9000	9000;9013		29.15	3.6994	1	3037400	+		61160	16845	40868	40885	69259;69260	69259					0.05207740194418875
VHRIVGTN	8	Unmodified	_VHRIVGTN_					0	0	0			REV__ENST00000354500.6_1_9:73442757-73477826:-|nuORF	REV__ENST00000354500.6_1_9:73442757-73477826:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.2588195800781	2	448.259051	894.503549	0.65386	0.0002931	-0.54104	-0.00024253	0.11282	5.0571E-05	448.25866214707224	89.921	4.4379	90.073	86.786	91.224	0.1519					231	105	5	0	0	0	0.8347	1	9033	9033		23.042	1.0826	1	2709200	+		61161	16845	40868	40885	69261	69261					0.05207740194418875
VHRIVGTN	8	Unmodified	_VHRIVGTN_					0	0	0			REV__ENST00000354500.6_1_9:73442757-73477826:-|nuORF	REV__ENST00000354500.6_1_9:73442757-73477826:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	448.2587890625	2	448.259051	894.503549	-1.7824	-0.000799	1.7883	0.00080162	0.0058491	2.6219E-06	448.2597133351224	89.882	2.6909	90.057	88.956	91.647	0.17579					189	63	5	0	0	0	0.82658	1	8970	8970		21.96	1.013	1	2344600	+		61162	16845	40868	40885	69262	69262					0.05207740194418875
VHRLKYFL	8	Unmodified	_VHRLKYFL_					0	0	0			REV__ENSG00000088538|ENST00000266037|DOCK3	REV__ENSG00000088538|ENST00000266037|DOCK3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.326171875	2	538.324194	1074.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.16	1	116.13	115.63	116.63	-0.02433								0	0	0	0.30004	1	12857	12857		21.702	0.7554	1		+		61163	16943	40869	40886	69263	69263					0.09950336193401199
VHRLYVGG	8	Unmodified	_VHRLYVGG_					0	0	0		ENSG00000140521|ENST00000268124|POLG	ENSG00000140521|ENST00000268124|POLG	ENSG00000140521|ENST00000268124|POLG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.24896240234375	2	450.756144	899.497735	-1.264	-0.00056978	-3.0711	-0.0013843	-4.3351	-0.0019541	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.89457	1	7646	7646		37.028	6.5248	1	414240			61164	4440	40870	40887	69264	69264					0.043966416827515786
VHRPVPPG	8	Unmodified	_VHRPVPPG_					0	0	0		ENST00000251691.4_1_6:138632571-138634975:+|nuORF	ENST00000251691.4_1_6:138632571-138634975:+|nuORF	ENST00000251691.4_1_6:138632571-138634975:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.74896240234375	2	429.750862	857.487171	-2.154	-0.00092569	-0.54032	-0.0002322	-2.6943	-0.0011579	429.75051038702645	40.625	2.1327	41.017	40.832	42.965	0.39209					111	57	2	0	0	0	0.88915	1	3524	3524		35.201	3.6709	1	10174000			61165	9304	40871	40888	69265	69265					0.05272659028332782
VHRVLFPW	8	Unmodified	_VHRVLFPW_					0	0	0		ENST00000428120.5_1_1:2116719-2117614:-|nuORF	ENST00000428120.5_1_1:2116719-2117614:-|nuORF	ENST00000428120.5_1_1:2116719-2117614:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.305419921875	2	527.303262	1052.59197	-0.62415	-0.00032912	3.3702	0.0017771	2.746	0.001448	527.3049884716947	99.5	1.8802	99.5	98.89	100.77	0					116	44	4	0	0	0	0.81548	1	10116	10116		20.482	0.48506	1	949980			61166	11590	40872	40889	69266	69266					0.06777780504899056
VHSASAPEP	9	Unmodified	_VHSASAPEP_					0	0	0		ENSG00000198315|ENST00000330236|ZKSCAN8	ENSG00000198315|ENST00000330236|ZKSCAN8	ENSG00000198315|ENST00000330236|ZKSCAN8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.6087951660156	2	447.719424	893.424296	-1.2657	-0.00056666	-2.0146	-0.00090198	-3.2803	-0.0014686	447.71865203131654	73.825	0.3765	74.213	74.078	74.454	0.38779					13	8	2	0	0	0	0.20789	1	8329	8329		21.96	11.094	1	121980			61167	8264	40873	40890	69267	69267					-0.02667951550381531
VHSGLPIVTGP	11	Unmodified	_VHSGLPIVTGP_					0	0	0			REV__ENST00000440716.5_1_19:54871478-54875971:-|nuORF	REV__ENST00000440716.5_1_19:54871478-54875971:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3273315429688	2	538.808574	1075.60259	1.6554	0.00089194	-1.6612	-0.00089508	-0.0058151	-3.1332E-06	538.807394003862	100.1	1.2729	100.44	100.07	101.34	0.34591					47	31	2	0	0	0	0.17478	1	12192	12192		40.778	0	1	261280	+		61168	26743	40874	40891	69268	69268					0.06781718368665679
VHSSLELI	8	Unmodified	_VHSSLELI_					0	0	0		ENST00000382357.3_1_21:34400138-34400483:+|nuORF	ENST00000382357.3_1_21:34400138-34400483:+|nuORF	ENST00000382357.3_1_21:34400138-34400483:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	448.30810546875	2	449.255643	896.496732	0.022532	1.0123E-05	4.0035	0.0017986	4.026	0.0018087	449.2587627256981	79.547	0.25642	80.096	79.999	80.256	0.54945					8	5	2	0	0	0	0.4196	1	9163	9163		19.36	0	1	50031			61169	10975	40875	40892	69269	69269					0.04434382523197655
VHSSVVVLK	9	Unmodified	_VHSSVVVLK_					0	0	0			REV__ENST00000432267.2_1_2:96905804-96905945:+|nuORF	REV__ENST00000432267.2_1_2:96905804-96905945:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.296630859375	2	484.300384	966.586216	0.36289	0.00017575	-0.055846	-2.7046E-05	0.30704	0.0001487	484.3001830226672	32.264	0.51573	32.371	32.146	32.662	0.10707					23	11	3	0	0	0	0.72402	1	2291	2291		38.806	0.99462	1	299170	+		61170	26632	40876	40893	69270	69270					0.10158637202573573
VHTILTADLVI	11	Unmodified	_VHTILTADLVI_					0	0	0		ENSG00000069431|ENST00000261200|ABCC9	ENSG00000069431|ENST00000261200|ABCC9	ENSG00000069431|ENST00000261200|ABCC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8560180664062	2	597.858264	1193.70197	0.8216	0.0004912	-4.2474	-0.0025393	-3.4258	-0.0020481	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.65746	1	9315	9315		37.812	2.1932	1	2486400			61171	1220	40877	40894	69271	69271					0.11287116262747077
VHTMLRVLKNR	11	Unmodified	_VHTMLRVLKNR_					0	0	0			REV__nc|ENSG00000111785|Q9NVN3-4|RIC8B	REV__nc|ENSG00000111785|Q9NVN3-4|RIC8B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.6083679199219	3	456.274846	1365.80271	0.4921	0.00022453	3.285	0.0014989	3.7771	0.0017234	456.2769892784234	71.043	0.27016	71.173	71.049	71.319	0.12964					16	11	2	0	0	0	0.17273	1	6479	6479		29.551	8.5185	1	81663	+		61172	17894	40878	40895	69272	69272					0.13443869764614647
VHTTVRLY	8	Unmodified	_VHTTVRLY_					0	0	0			REV__ENST00000205636.3_1_3:32523409-32523487:-|nuORF	REV__ENST00000205636.3_1_3:32523409-32523487:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7803649902344	2	494.782359	987.550165	-0.98596	-0.00048784	-2.8228	-0.0013967	-3.8088	-0.0018845	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.89962	1	8249	8249		38.806	0	1	385180	+		61173	24105	40879	40896	69273	69273					0.0558918002569726
VHVGLEAVE	9	Unmodified	_VHVGLEAVE_					0	0	0		ENSG00000166111|ENST00000610966|SVOP	ENSG00000166111|ENST00000610966|SVOP	ENSG00000166111|ENST00000610966|SVOP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.7613830566406	2	476.758549	951.502546	-0.64938	-0.0003096	0.86844	0.00041404	0.21905	0.00010444	476.7588362397882	24.297	0.92221	24.253	23.91	24.832	-0.043222					40	20	3	0	0	0	0.78536	1	914	914		29.15	2.4566	1	124730			61174	6155	40880	40897	69274	69274					0.0248548103485291
VHVIPSKRYD	10	Unmodified	_VHVIPSKRYD_					0	0	0			REV__nc|ENSG00000136425|O75838-3|CIB2	REV__nc|ENSG00000136425|O75838-3|CIB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.2275695800781	3	405.227779	1212.66151	0.067074	2.718E-05	-1.6033	-0.00064969	-1.5362	-0.00062251	405.2271099047801	26.788	0.59341	26.897	26.654	27.247	0.10901					49	27	2	0	0	0	0.86621	1	1055	1055		26.063	1.8316	1	95384	+		61175	19309	40881	40898	69275	69275					0.063681946629913
VHVLVPRL	8	Unmodified	_VHVLVPRL_					0	0	0		ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.8055114746094	2	466.805637	931.596721	-1.1455	-0.00053472	2.5543	0.0011924	1.4088	0.00065763	466.80675304740663	29.11	1.2501	29.081	28.525	29.775	-0.029207					56	28	2	0	0	0	0.87276	1	1817	1817		29.842	4.3914	1	212370			61176	10551	40882	40899	69276	69276					0.12818664647659261
VHVLVPRL	8	Unmodified	_VHVLVPRL_					0	0	0		ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	466.805637	931.596721	0.33626	0.00015697	0.98486	0.00045974	1.3211	0.00061671	466.80602701026487	28.831	0.41896	28.862	28.613	29.032	0.030947	-0.10711	-0.00051631	NaN	29.842	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40160			61177	10551	40882	40899							0.12818664647659261
VHVLVPRL	8	Unmodified	_VHVLVPRL_					0	0	0		ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	466.805637	931.596721	-0.11382	-5.3133E-05	1.3976	0.0006524	1.2838	0.00059927	466.8062009162091	28.884	0.39006	28.865	28.617	29.007	-0.019407	-0.10475	-0.00013098	NaN	29.842	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43855			61178	10551	40882	40899							0.12818664647659261
VHVLVPRL	8	Unmodified	_VHVLVPRL_					0	0	0		ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	466.805637	931.596721	-1.1209	-0.00052326	2.3281	0.0010868	1.2071	0.0005635	466.80677722702967	28.84	0.3869	28.908	28.713	29.1	0.06868	-0.061327	0.00073772	NaN	29.842	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88484			61179	10551	40882	40899							0.12818664647659261
VHVLVPRL	8	Unmodified	_VHVLVPRL_					0	0	0		ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	466.805637	931.596721	0.12303	5.7432E-05	1.2338	0.00057594	1.3568	0.00063338	466.8062395178972	28.893	0.7756	29.005	28.775	29.551	0.11225	0.035241	-0.0002839	NaN	29.842	61	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82838			61180	10551	40882	40899							0.12818664647659261
VHVLVPRL	8	Unmodified	_VHVLVPRL_					0	0	0		ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	466.805637	931.596721	0.37001	0.00017272	1.0491	0.00048973	1.4191	0.00066245	466.8060533160819	29.023	0.95357	29.045	28.88	29.833	0.021948	0.075338	-0.00045634	NaN	29.842	71	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122650			61181	10551	40882	40899							0.12818664647659261
VHVLVPRL	8	Unmodified	_VHVLVPRL_					0	0	0		ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	ENST00000367510.7_1_1:185014533-185014632:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	466.805637	931.596721	0.23576	0.00011006	0.95258	0.00044467	1.1883	0.00055473	466.805990418552	29.194	1.2017	29.021	28.547	29.749	-0.17336	0.051137	-0.00054645	NaN	29.842	52	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	204970			61182	10551	40882	40899							0.12818664647659261
VHVRVHTG	8	Unmodified	_VHVRVHTG_					0	0	0		nc|ENSG00000173875|Q3KP31-2|ZNF791;ENSG00000173875|ENST00000343325|ZNF791	nc|ENSG00000173875|Q3KP31-2|ZNF791	nc|ENSG00000173875|Q3KP31-2|ZNF791	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.9482116699219	2	452.759218	903.503883	1.179	0.00053378	-1.1273	-0.00051038	0.051676	2.3397E-05	452.75850579135516	107.2	0.75331	107.23	106.94	107.69	0.035614					28	17	2	0	0	0	0.4196	1	11766	11766		44.117	26.752	1	110080			61183	6894	40883	40900	69277	69277					0.048271599142935884
VHYPPLLS	8	Unmodified	_VHYPPLLS_					0	0	0			REV__ENSG00000135763|ENST00000258243|URB2	REV__ENSG00000135763|ENST00000258243|URB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	464.25433349609375	2	463.260728	924.506903	-0.2634	-0.00012202	-3.0288	-0.0014031	-3.2922	-0.0015251	463.2595741693253	84.254	1.3069	84.701	83.929	85.236	0.44736					49	31	2	0	0	0	0.4196	1	9866	9866		35.201	1.6851	1	192870	+		61184	19246	40884	40901	69278	69278					0.04162990248414644
VHYPRVFIYLC	11	Unmodified	_VHYPRVFIYLC_					0	0	0			REV__nc|ENSG00000078269|O15056-2|SYNJ2	REV__nc|ENSG00000078269|O15056-2|SYNJ2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.769287109375	3	470.584797	1408.73256	-0.67198	-0.00031622	-0.95271	-0.00044833	-1.6247	-0.00076455	470.58438019020343	51.433	0.49857	51.41	51.154	51.653	-0.02343					19	11	2	0	0	0	0.17376	1	4482	4482		26.063	3.5018	1	110360	+		61185	16761	40885	40902	69279	69279					0.044545713761863226
VHYVIEGI	8	Unmodified	_VHYVIEGI_					0	0	0			REV__ENST00000553281.5_1_14:89088194-89171927:-|nuORF	REV__ENST00000553281.5_1_14:89088194-89171927:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7774353027344	2	465.258185	928.501818	-1.0465	-0.00048691	-2.7529	-0.0012808	-3.7995	-0.0017677	465.25691975251704	82.28	0.53225	82.435	82.178	82.71	0.15473					17	12	2	0	0	0	0.4196	1	7892	7892		28.254	0	1	64049	+		61186	21191	40886	40903	69280	69280					0.03470686385821864
VIAAFCFL	8	Unmodified	_VIAAFCFL_					0	0	0		ENSG00000135956|ENST00000258439|TMEM127	ENSG00000135956|ENST00000258439|TMEM127	ENSG00000135956|ENST00000258439|TMEM127	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.24090576171875	2	442.24095	882.467346	0.21245	9.3954E-05	-0.34891	-0.0001543	-0.13646	-6.0348E-05	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.88393	1	9377	9377		33.493	0	1	1030200			61187	4074	40887	40904	69281	69281					0.021411469733379818
VIAARWKI	8	Unmodified	_VIAARWKI_					0	0	0			REV__ENSG00000169018|ENST00000306917|FEM1B	REV__ENSG00000169018|ENST00000306917|FEM1B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8049621582031	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.639	1	42.601	42.101	43.101	-0.038223								0	0	0	0.30125	1	3290	3290		20.482	0	1		+		61188	21540	40888	40905	69282	69282					0.11714664647661266
VIAARWKI	8	Unmodified	_VIAARWKI_					0	0	0			REV__ENSG00000169018|ENST00000306917|FEM1B	REV__ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8022766113281	2	478.805637	955.596721	-2.669	-0.0012779	3.4642	0.0016587	0.7952	0.00038075	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.88915	1	2939	2939		35.201	8.4046	1	370420	+		61189	21540	40888	40905	69283	69283					0.11714664647661266
VIAAVLEVL	9	Unmodified	_VIAAVLEVL_					0	0	0			REV__ENSG00000000003|ENST00000373020|TSPAN6	REV__ENSG00000000003|ENST00000373020|TSPAN6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8001708984375	2	463.799686	925.584819	-1.356	-0.00062891	2.7368	0.0012693	1.3808	0.00064042	463.8008126700971	41.516	1.4901	41.52	41.125	42.615	0.003418					87	36	3	0	0	0	0.7932	1	3103	3103		25.45	0	1	533600	+		61190	16036	40889	40906	69284	69284					0.11905003113804469
VIADLHLS	8	Unmodified	_VIADLHLS_					0	0	0		ENSG00000178295|ENST00000381254|GEN1	ENSG00000178295|ENST00000381254|GEN1	ENSG00000178295|ENST00000381254|GEN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.2508239746094	2	434.25036	866.486168	0.28363	0.00012317	0.21118	9.1704E-05	0.49481	0.00021487	434.25025171809705	33.28	0.67592	33.45	33.145	33.821	0.16971					33	15	3	0	0	0	0.86288	1	2393	2393		26.796	2.2921	1	281640			61191	7197	40890	40907	69285	69285					0.04758399868762808
VIAFATVLT	9	Unmodified	_VIAFATVLT_					0	0	0		ENST00000522080.5_1_3:169513982-169530312:-|nuORF;ENSG00000171757|ENST00000446859|LRRC34	ENST00000522080.5_1_3:169513982-169530312:-|nuORF	ENST00000522080.5_1_3:169513982-169530312:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.78228759765625	2	467.784036	933.553519	-1.2971	-0.00060674	-1.5033	-0.00070321	-2.8003	-0.0013099	467.78318178495175	30.176	0.88393	30.205	29.876	30.76	0.028618					38	19	3	0	0	0	0.5393	1	1969	1969		50.025	18.07	1	607830			61192	6704	40891	40908	69286	69286					0.08408430079703066
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3011779785156	2	456.299853	910.585153	-1.821	-0.00083093	3.591	0.0016386	1.77	0.00080766	456.3013684368404	43.078	1.5972	43.078	42.644	44.241	0					105	38	3	0	0	0	0.86786	1	3015	3015		26.796	0	1	1086200			61193	2879	40892	40909	69287	69287					0.12628422833677178
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3009033203125	2	456.299853	910.585153	-1.7927	-0.00081802	3.97	0.0018115	2.1773	0.00099349	456.30151188064457	45.052	1.9056	45.052	44.154	46.06	0					117	46	3	0	0	0	0.86786	1	3325	3325		26.796	1.3459	1	498210			61194	2879	40892	40909	69288	69288					0.12628422833677178
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30133056640625	2	456.299853	910.585153	-0.11111	-5.0701E-05	2.9884	0.0013636	2.8773	0.0013129	456.3010566410468	35.268	1.48	35.256	34.768	36.248	-0.012203					106	34	4	0	0	0	0.85976	1	2149	2149		35.201	3.2459	1	794600			61195	2879	40892	40909	69289	69289					0.12628422833677178
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3018798828125	2	456.299853	910.585153	0.24355	0.00011113	1.0535	0.0004807	1.297	0.00059184	456.30021098241764	43.255	2.3971	43.228	42.036	44.433	-0.026764					115	57	3	0	0	0	0.70264	1	3283	3283		44.531	0	1	803600			61196	2879	40892	40909	69290	69290					0.12628422833677178
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3008117675781	2	456.299853	910.585153	-0.84354	-0.00038491	3.2342	0.0014758	2.3906	0.0010908	456.30117331551685	46.601	1.8723	46.572	45.714	47.586	-0.028778					105	48	3	0	0	0	0.86786	1	3865	3865		26.796	0	1	332630			61197	2879	40892	40909	69291	69291					0.12628422833677178
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30072021484375	2	456.299853	910.585153	-0.23513	-0.00010729	2.1872	0.000998	1.952	0.00089071	456.3007121817001	45.145	1.6994	45.141	44.498	46.198	-0.0041618					86	39	3	0	0	0	0.85976	1	3574	3574		35.201	0	1	438290			61198	2879	40892	40909	69292	69292					0.12628422833677178
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3017883300781	2	456.299853	910.585153	-1.2496	-0.00057018	3.0457	0.0013898	1.7962	0.00081959	456.3011111940197	43.185	1.5794	43.191	42.556	44.136	0.0057487					96	41	4	0	0	0	0.86786	1	2961	2961		26.796	0	1	673120			61199	2879	40892	40909	69293	69293					0.12628422833677178
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.301025390625	2	456.299853	910.585153	0.16746	7.6412E-05	2.7809	0.0012689	2.9484	0.0013454	456.30098393638264	34.91	1.4474	35.016	34.575	36.022	0.10603					127	53	3	0	0	0	0.86786	1	1815	1815		26.796	0	1	751300			61200	2879	40892	40909	69294	69294					0.12628422833677178
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30145263671875	2	456.299853	910.585153	0.23964	0.00010935	1.5979	0.00072912	1.8375	0.00083847	456.3004567864084	43.097	2.576	43.154	41.691	44.267	0.056747					113	66	3	0	0	0	0.86786	1	2940	2940		26.796	2.5934	1	821670			61201	2879	40892	40909	69295	69295					0.12628422833677178
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30059814453125	2	456.299853	910.585153	0.12298	5.6116E-05	2.7993	0.0012773	2.9223	0.0013334	456.30098509136985	34.994	1.698	34.939	34.615	36.313	-0.055149					136	59	3	0	0	0	0.85976	1	1814	1814		35.201	0	1	657240			61202	2879	40892	40909	69296	69296					0.12628422833677178
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3011779785156	2	456.299853	910.585153	-0.23118	-0.00010549	2.4791	0.0011312	2.2479	0.0010257	456.30086790597977	45.013	2.0189	44.944	43.946	45.965	-0.068634					97	50	2	0	0	0	0.85976	1	3237	3237		35.201	8.4046	1	498520			61203	2879	40892	40909	69297	69297					0.12628422833677178
VIAGGLVGLI	10	Unmodified	_VIAGGLVGLI_					0	0	0		ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	ENSG00000115884|ENST00000254351|SDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30126953125	2	456.299853	910.585153	0.82269	0.00037539	2.1236	0.000969	2.9463	0.0013444	456.30067401982916	32.79	1.601	33.001	32.465	34.066	0.21168					118	37	4	0	0	0	0.85976	1	2324	2324		35.201	4.6971	1	2892400			61204	2879	40892	40909	69298	69298					0.12628422833677178
VIAGRLAPW	9	Unmodified	_VIAGRLAPW_					0	0	0		ENSG00000177191|ENST00000691102|B3GNT8	ENSG00000177191|ENST00000691102|B3GNT8	ENSG00000177191|ENST00000691102|B3GNT8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.794677734375	2	491.795269	981.575986	0.21767	0.00010705	0.41627	0.00020472	0.63394	0.00031177	491.79537288056144	45.526	1.3498	45.507	44.705	46.055	-0.018581					75	31	3	0	0	0	0.7932	1	3645	3645		25.45	0	1	529090			61205	7126	40893	40910	69299	69299					0.08446074267988024
VIAGRLAPW	9	Unmodified	_VIAGRLAPW_					0	0	0		ENSG00000177191|ENST00000691102|B3GNT8	ENSG00000177191|ENST00000691102|B3GNT8	ENSG00000177191|ENST00000691102|B3GNT8	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7964782714844	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.209	1	64.208	63.708	64.708	-0.00078583								0	0	0	0.31088	1	5990	5990		26.796	6.3143	1				61206	7126	40893	40910	69300	69300					0.08446074267988024
VIAGRLAPW	9	Unmodified	_VIAGRLAPW_					0	0	0		ENSG00000177191|ENST00000691102|B3GNT8	ENSG00000177191|ENST00000691102|B3GNT8	ENSG00000177191|ENST00000691102|B3GNT8	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79632568359375	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.887	1	56.859	56.359	57.359	-0.02866								0	0	0	0.31472	1	5223	5223		25.45	0	1				61207	7126	40893	40910	69301	69301					0.08446074267988024
VIAGRLAPW	9	Unmodified	_VIAGRLAPW_					0	0	0		ENSG00000177191|ENST00000691102|B3GNT8	ENSG00000177191|ENST00000691102|B3GNT8	ENSG00000177191|ENST00000691102|B3GNT8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7988586425781	2	491.795269	981.575986	-0.78467	-0.0003859	1.4321	0.0007043	0.64743	0.0003184	491.7961077186052	63.812	0.83656	63.842	63.506	64.343	0.030247					49	34	2	0	0	0	0.7932	1	5646	5646		19.36	0	1	86161			61208	7126	40893	40910	69302	69302					0.08446074267988024
VIAGSSKYLF	10	Unmodified	_VIAGSSKYLF_					0	0	0			REV__ENSG00000184454|ENST00000374392|NCMAP	REV__ENSG00000184454|ENST00000374392|NCMAP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.8035278320312	2	542.8055	1083.59645	0.095296	5.1727E-05	-3.7394	-0.0020298	-3.6441	-0.001978	542.8032653042026	33.942	0.70278	34.152	33.901	34.604	0.21003					40	16	3	0	0	0	0.46422	1	2476	2476		58.782	10.822	1	834600	+		61209	22679	40894	40911	69303	69303					0.05799200137130356
VIAHFSHEL	9	Unmodified	_VIAHFSHEL_					0	0	0		chr11:78478683-78489913|13|13.62|0.17|6.36|-|1|TE_info:AluJr,AluJr_dup52982,Alu,SINE,donor,+,78489913,78490051|NARS2,None|1	chr11:78478683-78489913|13|13.62|0.17|6.36|-|1|TE_info:AluJr,AluJr_dup52982,Alu,SINE,donor,+,78489913,78490051|NARS2,None|1	chr11:78478683-78489913|13|13.62|0.17|6.36|-|1|TE_info:AluJr,AluJr_dup52982,Alu,SINE,donor,+,78489913,78490051|NARS2,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.78076171875	2	526.779816	1051.54508	-0.6273	-0.00033045	0.7852	0.00041363	0.1579	8.3178E-05	526.7800704110876	62.601	0.89739	62.624	62.313	63.21	0.022984					97	40	3	0	0	0	0.58151	1	5481	5481		47.916	7.1374	1	577420			61210	109	40895	40912	69304	69304					0.021368761630810695
VIAHRLSTIKN	11	Unmodified	_VIAHRLSTIKN_					0	0	0		ENSG00000135776|ENST00000344517|ABCB10	ENSG00000135776|ENST00000344517|ABCB10	ENSG00000135776|ENST00000344517|ABCB10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	417.9223937988281	3	417.922578	1250.7459	-0.96194	-0.00040202	0.30568	0.00012775	-0.65627	-0.00027427	417.922646807868	105.95	2.4445	105.95	105.29	107.73	0					194	56	4	0	0	0	0.73893	1	11024	11024		16.53	1.1924	1	9358100			61211	4054	40896	40913	69305	69305					0.13056145479754377
VIAIASEVPL	10	Unmodified	_VIAIASEVPL_					0	0	0			REV__ENST00000406117.6_1_22:44322822-44359208:+|nuORF	REV__ENST00000406117.6_1_22:44322822-44359208:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3081970214844	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.421	1	44.429	43.929	44.929	0.0084534								0	0	0	0.45132	1	3131	3131		29.15	0	1		+		61212	17174	40897	40914	69306	69306					0.09632084279917308
VIAITSVIP	9	Unmodified	_VIAITSVIP_					0	0	0			REV__nc|ENSG00000140798|Q96J65|ABCC12	REV__nc|ENSG00000140798|Q96J65|ABCC12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7897033691406	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.7932	1	3090	3090		25.45	4.9683	1	759950	+		61213	19641	40898	40915	69307	69307					0.10984716596760791
VIAITSVIP	9	Unmodified	_VIAITSVIP_					0	0	0			REV__nc|ENSG00000140798|Q96J65|ABCC12	REV__nc|ENSG00000140798|Q96J65|ABCC12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.79205322265625	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.69914	1	4059	4059		40.573	8.6178	1	186860	+		61214	19641	40898	40915	69308	69308					0.10984716596760791
VIAITSVIP	9	Unmodified	_VIAITSVIP_					0	0	0			REV__nc|ENSG00000140798|Q96J65|ABCC12	REV__nc|ENSG00000140798|Q96J65|ABCC12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79296875	2	456.791861	911.569169	0.10619	4.8505E-05	2.6551	0.0012128	2.7613	0.0012614	456.7929673289598	38.995	1.2001	38.965	38.494	39.694	-0.03027					96	27	4	0	0	0	0.76996	2	2671	2671;2744		33.516	6.7195	1	2198500	+		61215	19641	40898	40915	69309;69310	69309					0.10984716596760791
VIAITSVIP	9	Unmodified	_VIAITSVIP_					0	0	0			REV__nc|ENSG00000140798|Q96J65|ABCC12	REV__nc|ENSG00000140798|Q96J65|ABCC12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7920837402344	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.76996	1	3311	3311		33.516	0	1	652510	+		61216	19641	40898	40915	69311	69311					0.10984716596760791
VIAITSVIP	9	Unmodified	_VIAITSVIP_					0	0	0			REV__nc|ENSG00000140798|Q96J65|ABCC12	REV__nc|ENSG00000140798|Q96J65|ABCC12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7888488769531	2	456.791861	911.569169	-1.2294	-0.00056156	2.5606	0.0011697	1.3313	0.00060812	456.79289004576646	40.059	1.2176	40.068	39.557	40.774	0.0092773					97	29	4	0	0	0	0.76996	1	2915	2915		33.516	0	1	1129600	+		61217	19641	40898	40915	69312	69312					0.10984716596760791
VIAITSVIP	9	Unmodified	_VIAITSVIP_					0	0	0			REV__nc|ENSG00000140798|Q96J65|ABCC12	REV__nc|ENSG00000140798|Q96J65|ABCC12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79168701171875	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.67235	1	3217	3217		42.474	1.9018	1	608260	+		61218	19641	40898	40915	69313	69313					0.10984716596760791
VIAITSVIP	9	Unmodified	_VIAITSVIP_					0	0	0			REV__nc|ENSG00000140798|Q96J65|ABCC12	REV__nc|ENSG00000140798|Q96J65|ABCC12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7894592285156	2	456.791861	911.569169	0.23747	0.00010847	2.1705	0.00099146	2.408	0.0010999	456.79269786067573	42.365	2.4539	42.43	41.781	44.235	0.065037					168	63	3	0	0	0	0.7932	2	3041	3041;3056		24.203	5.8783	1	556840	+		61219	19641	40898	40915	69314;69315	69314					0.10984716596760791
VIAKALVR	8	Unmodified	_VIAKALVR_					0	0	0		nc|ENSG00000103723|Q13367|AP3B2;ENSG00000103723|ENST00000535359|AP3B2;nc|ENSG00000103723|Q13367-3|AP3B2	nc|ENSG00000103723|Q13367|AP3B2	nc|ENSG00000103723|Q13367|AP3B2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3002014160156	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.85787	1	7015	7015		9.4706	0	1	1921500			61220	2098	40899	40916	69316	69316					0.14627262273359065
VIAKRKEDS	9	Unmodified	_VIAKRKEDS_					0	0	0		nc|ENSG00000139154|Q6ZN18|AEBP2;ENSG00000139154|ENST00000266508|AEBP2;nc|ENSG00000139154|Q6ZN18-3|AEBP2	nc|ENSG00000139154|Q6ZN18|AEBP2	nc|ENSG00000139154|Q6ZN18|AEBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303466796875	2	523.303655	1044.59276	-0.041393	-2.1661E-05	-0.20594	-0.00010777	-0.24734	-0.00012943	523.303419759483	86.656	3.1515	86.723	84.637	87.788	0.067444					274	72	5	0	0	0	0.76764	1	8568	8568		34.173	0	1	3850300			61221	4349	40900	40917	69317	69317					0.07224530363282611
VIAKRKEDS	9	Unmodified	_VIAKRKEDS_					0	0	0		nc|ENSG00000139154|Q6ZN18|AEBP2;ENSG00000139154|ENST00000266508|AEBP2;nc|ENSG00000139154|Q6ZN18-3|AEBP2	nc|ENSG00000139154|Q6ZN18|AEBP2	nc|ENSG00000139154|Q6ZN18|AEBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3038940429688	2	523.303655	1044.59276	1.2406	0.00064919	-1.1711	-0.00061286	0.069436	3.6336E-05	523.3029395587585	101.08	1.4079	101.12	100.73	102.14	0.044815					78	33	4	0	0	0	0.76764	1	10890	10890		34.173	3.6689	1	1032400			61222	4349	40900	40917	69318	69318					0.07224530363282611
VIAKRVLA	8	Unmodified	_VIAKRVLA_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2991943359375	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.89457	1	6930	6930		37.028	7.1869	1	1072400	+		61223	16117	40901	40918	69319	69319					0.14627262273370434
VIAKRVLA	8	Unmodified	_VIAKRVLA_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3002624511719	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.80127	2	6574	6574;6687		16.705	1.0687	1	1852500	+		61224	16117	40901	40918	69320;69321	69320					0.14627262273370434
VIALALEVV	9	Unmodified	_VIALALEVV_					0	0	0		nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L;ENSG00000157060|ENST00000367547|SHCBP1L	nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.7996826171875	2	463.799686	925.584819	-1.1872	-0.0005506	2.6442	0.0012264	1.4571	0.00067579	463.80074391702703	41.648	1.5471	41.608	41.079	42.626	-0.039845					90	38	3	0	0	0	0.7932	1	3136	3136		19.36	1.995	1	510860			61225	5408	40902	40919	69322	69322					0.11905003113815837
VIALALEVV	9	Unmodified	_VIALALEVV_					0	0	0		nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L;ENSG00000157060|ENST00000367547|SHCBP1L	nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.79998779296875	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.69914	1	3509	3509		40.573	1.7665	1	1294000			61226	5408	40902	40919	69323	69323					0.11905003113815837
VIALALEVV	9	Unmodified	_VIALALEVV_					0	0	0		nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L;ENSG00000157060|ENST00000367547|SHCBP1L	nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.8009338378906	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.77546	2	3793	3757;3793		31.955	1.4512	1	5050800			61227	5408	40902	40919	69324;69325	69325					0.11905003113815837
VIALALEVV	9	Unmodified	_VIALALEVV_					0	0	0		nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L;ENSG00000157060|ENST00000367547|SHCBP1L	nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.80078125	2	463.799686	925.584819	-1.9529	-0.00090576	3.5624	0.0016523	1.6095	0.0007465	463.801178460678	42.067	1.8831	42.764	41.947	43.83	0.69754					154	47	4	0	0	0	0.7932	1	3763	3763		19.36	3.7182	1	6253400			61228	5408	40902	40919	69326	69326					0.11905003113815837
VIALELLDVKS	11	Unmodified	_VIALELLDVKS_					0	0	0		nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80;ENSG00000144406|ENST00000673920|UNC80;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;ENST00000489023.5_1_2:210693994-210832362:+|nuORF	nc|ENSG00000144406|Q8N2C7-7|UNC80	nc|ENSG00000144406|Q8N2C7-7|UNC80	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.91583251953125	3	400.579706	1198.71729	3.4049	0.0013639	-1.4956	-0.00059909	1.9093	0.00076484	400.5790813057724	111.94	0.27284	111.98	111.85	112.12	0.041832					15	8	2	0	0	0	0.74405	1	13551	13551		23.378	5.5448	1	217270			61229	4705	40903	40920	69327	69327					0.12587983059961516
VIALLRIYD	9	Unmodified	_VIALLRIYD_					0	0	0			REV__ENST00000560260.5_1_15:64422114-64427054:+|nuORF	REV__ENST00000560260.5_1_15:64422114-64427054:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3265380859375	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.7932	1	12667	12667		17.365	0	1	4041000	+		61230	16267	40904	40921	69328	69328					0.10939479408125408
VIALPETL	8	Unmodified	_VIALPETL_					0	0	0			REV__ENST00000471758.1_1_X:55026837-55029420:+|nuORF	REV__ENST00000471758.1_1_X:55026837-55029420:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2615051269531	2	428.262936	854.51132	-1.021	-0.00043726	-1.8984	-0.00081301	-2.9194	-0.0012503	428.26203928148993	90.556	2.3584	91.026	90.524	92.882	0.47068					198	56	5	0	0	0	0.884	1	10785	10785		33.516	4.366	1	38446000	+		61231	21560	40905	40922	69329	69329					0.0782445467133357
VIALPLEK	8	Unmodified	_VIALPLEK_					0	0	0			REV__ENST00000396623.7_1_8:67380599-67380680:+|nuORF	REV__ENST00000396623.7_1_8:67380599-67380680:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7876281738281	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.93529	1	2726	2726		52.299	0	1	10128000	+		61232	26148	40906	40923	69330	69330					0.11308733942325944
VIALPLEK	8	Unmodified	_VIALPLEK_					0	0	0			REV__ENST00000396623.7_1_8:67380599-67380680:+|nuORF	REV__ENST00000396623.7_1_8:67380599-67380680:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7866516113281	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.88915	1	3397	3397		35.201	1.6851	1	4170800	+		61233	26148	40906	40923	69331	69331					0.11308733942325944
VIALPLTLLV	10	Unmodified	_VIALPLTLLV_					0	0	0		ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3603515625	2	526.359911	1050.70527	-0.016718	-8.7995E-06	2.2479	0.0011832	2.2312	0.0011744	526.3609420824897	35.324	1.4285	35.312	34.729	36.157	-0.012199					134	33	5	0	0	0	0.85694	1	2278	2278		21.96	4.5949	1	5338900			61234	4971	40907	40924	69332	69332					0.1819441110740172
VIALPLTLLV	10	Unmodified	_VIALPLTLLV_					0	0	0		ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.361328125	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.81018	1	2024	2024		38.806	14.603	1	5020100			61235	4971	40907	40924	69333	69333					0.1819441110740172
VIALPLTLLV	10	Unmodified	_VIALPLTLLV_					0	0	0		ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3610229492188	2	526.359911	1050.70527	-0.47346	-0.00024921	2.7476	0.0014462	2.2741	0.001197	526.3612126681783	35.14	1.5704	35.146	34.727	36.297	0.0063934					147	36	5	0	0	0	0.86201	1	2220	2220		24.203	0	1	2682400			61236	4971	40907	40924	69334	69334					0.1819441110740172
VIALPLTLLV	10	Unmodified	_VIALPLTLLV_					0	0	0		ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3606567382812	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.86201	1	2509	2509		24.203	1.1603	1	2706400			61237	4971	40907	40924	69335	69335					0.1819441110740172
VIALPLTLLV	10	Unmodified	_VIALPLTLLV_					0	0	0		ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3613891601562	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.84874	1	1880	1880		18.324	0.95945	1	1497200			61238	4971	40907	40924	69336	69336					0.1819441110740172
VIALPLTLLV	10	Unmodified	_VIALPLTLLV_					0	0	0		ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3617553710938	2	526.359911	1050.70527	0.22046	0.00011604	2.2181	0.0011675	2.4386	0.0012836	526.3609252843382	33.187	1.6469	33.296	32.993	34.64	0.10991					241	72	5	0	0	0	0.86201	1	1675	1675		24.203	0	1	5657400			61239	4971	40907	40924	69337	69337					0.1819441110740172
VIALPLTLLV	10	Unmodified	_VIALPLTLLV_					0	0	0		ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	ENSG00000148602|ENST00000372105|LRIT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3619995117188	2	526.359911	1050.70527	1.0713	0.00056389	1.2303	0.0006476	2.3016	0.0012115	526.360423923534	32.788	1.6436	32.999	32.422	34.066	0.21168					152	38	5	0	0	0	0.84112	1	2299	2299		37.159	11.709	1	7743700			61240	4971	40907	40924	69338	69338					0.1819441110740172
VIALVPKE	8	Unmodified	_VIALVPKE_					0	0	0		ENST00000397477.2_1_22:32665849-32666506:+|nuORF	ENST00000397477.2_1_22:32665849-32666506:+|nuORF	ENST00000397477.2_1_22:32665849-32666506:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7795715332031	2	434.778754	867.542954	-1.6369	-0.00071169	4.2666	0.001855	2.6297	0.0011433	434.7804825082367	43.238	1.5673	43.244	42.525	44.093	0.0057526					133	41	4	0	0	0	0.82464	1	2908	2908		21.702	0	1	2391100			61241	11152	40908	40925	69339	69339					0.10388447425282266
VIALVPRRK	9	Unmodified	_VIALVPRRK_					0	0	0			REV__ENST00000367112.1_2_6:158500311-158517393:+|nuORF	REV__ENST00000367112.1_2_6:158500311-158517393:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.361572265625	2	526.358568	1050.70258	1.1443	0.00060234	4.0086	0.00211	5.153	0.0027123	526.3605227402171	34.131	1.7657	34.341	33.942	35.708	0.21003					136	43	4	0	0	0	0.7932	1	2557	2557		19.36	0	1	7568500	+		61242	25549	40909	40926	69340	69340					0.1792600049311659
VIALVPRRK	9	Unmodified	_VIALVPRRK_					0	0	0			REV__ENST00000367112.1_2_6:158500311-158517393:+|nuORF	REV__ENST00000367112.1_2_6:158500311-158517393:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3609619140625	2	526.358568	1050.70258	1.057	0.00055634	4.0611	0.0021376	5.1181	0.0026939	526.3605624063631	36.088	1.9344	36.37	35.78	37.714	0.28173					146	47	5	0	0	0	0.7932	1	2810	2810		25.45	0	1	5773200	+		61243	25549	40909	40926	69341	69341					0.1792600049311659
VIALVPRRK	9	Unmodified	_VIALVPRRK_					0	0	0			REV__ENST00000367112.1_2_6:158500311-158517393:+|nuORF	REV__ENST00000367112.1_2_6:158500311-158517393:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.36083984375	2	526.358568	1050.70258	1.6664	0.00087713	3.3741	0.001776	5.0405	0.0026531	526.3602142312507	35.988	1.9361	36.429	35.808	37.744	0.44043					142	47	4	0	0	0	0.7932	1	2789	2789		25.45	0	1	6841400	+		61244	25549	40909	40926	69342	69342					0.1792600049311659
VIALVTKAP	9	Unmodified	_VIALVTKAP_					0	0	0			REV__ENSG00000164080|ENST00000684192|RAD54L2	REV__ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3013610839844	2	456.299853	910.585153	-0.40408	-0.00018438	3.3963	0.0015497	2.9922	0.0013653	456.3012719086531	32.915	1.5209	33.085	32.546	34.067	0.16971					108	35	4	0	0	0	0.78536	1	2347	2347		29.15	1.2673	1	2612400	+		61245	21027	40910	40927	69343	69343					0.1262842283365444
VIAMKAKKK	9	Unmodified	_VIAMKAKKK_					0	0	0			REV__nc|ENSG00000197969|Q96RL7-4|VPS13A	REV__nc|ENSG00000197969|Q96RL7-4|VPS13A	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.80218505859375	2	508.83608	1015.65761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.658	1	19.73	19.23	20.23	0.071127								0	0	0	0.35896	1	422	422		12.207	0	1		+		61246	23282	40911	40928	69344	69344					0.1504043363557912
VIAPSLLVA	9	Unmodified	_VIAPSLLVA_					0	0	0		ENST00000556883.1_1_14:93650993-93651212:-|nuORF	ENST00000556883.1_1_14:93650993-93651212:-|nuORF	ENST00000556883.1_1_14:93650993-93651212:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7880554199219	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.7932	1	3654	3654		13.775	0	1	539980			61247	13759	40912	40929	69345	69345					0.11308733942325944
VIAPSLLVA	9	Unmodified	_VIAPSLLVA_					0	0	0		ENST00000556883.1_1_14:93650993-93651212:-|nuORF	ENST00000556883.1_1_14:93650993-93651212:-|nuORF	ENST00000556883.1_1_14:93650993-93651212:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7873229980469	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.7932	1	3010	3010		8.8223	0	1	12523000			61248	13759	40912	40929	69346	69346					0.11308733942325944
VIAQGIGKL	9	Unmodified	_VIAQGIGKL_					0	0	0		ENST00000532004.5_1_11:810000-812833:+|nuORF;ENST00000525722.1_1_11:811587-812833:+|nuORF;ENST00000526222.5_1_11:810419-812833:+|nuORF;ENSG00000177600|ENST00000321153|RPLP2	ENST00000532004.5_1_11:810000-812833:+|nuORF	ENST00000532004.5_1_11:810000-812833:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.78887939453125	2	449.789653	897.564752	-1.5552	-0.00069951	1.4026	0.00063087	-0.15261	-6.8644E-05	449.7900380866898	46.851	0.47525	47.322	47.175	47.65	0.47139					17	10	2	0	0	0	0.034856	2	4430	4430;4441		115.46	32.172	1	1620500			61249	13369	40913	40930	69347;69348	69347					0.11187252173851903
VIAQGIGKL	9	Unmodified	_VIAQGIGKL_					0	0	0		ENST00000532004.5_1_11:810000-812833:+|nuORF;ENST00000525722.1_1_11:811587-812833:+|nuORF;ENST00000526222.5_1_11:810419-812833:+|nuORF;ENSG00000177600|ENST00000321153|RPLP2	ENST00000532004.5_1_11:810000-812833:+|nuORF	ENST00000532004.5_1_11:810000-812833:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.7890319824219	2	449.789653	897.564752	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.655	1	47.578	47.078	48.078	0.92315								0	0	0	0.0064362	1	4421	4421		111.65	6.3795	1				61250	13369	40913	40930	69349	69349					0.11187252173851903
VIAQGIGKL	9	Unmodified	_VIAQGIGKL_					0	0	0		ENST00000532004.5_1_11:810000-812833:+|nuORF;ENST00000525722.1_1_11:811587-812833:+|nuORF;ENST00000526222.5_1_11:810419-812833:+|nuORF;ENSG00000177600|ENST00000321153|RPLP2	ENST00000532004.5_1_11:810000-812833:+|nuORF	ENST00000532004.5_1_11:810000-812833:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.7890930175781	2	449.789653	897.564752	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.729	1	47.652	47.152	48.152	0.92315								0	0	0	1.0225E-07	1	4431	4431		124.59	41.307	1				61251	13369	40913	40930	69350	69350					0.11187252173851903
VIARRARS	8	Unmodified	_VIARRARS_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.79010009765625	2	464.793592	927.572632	-1.9025	-0.00088428	-4.2508	-0.0019758	-6.1534	-0.00286	464.7914872059108	34.459	1.5924	34.459	34.009	35.601	0					104	42	3	0	0	0	0.86791	1	1933	1933		28.254	0	1	277220	+		61252	24039	40914	40931	69351	69351					0.1059482421399025
VIARVPLAIPF	11	Unmodified	_VIARVPLAIPF_					0	0	0		ENST00000349223.9_1_16:68262189-68262411:+|nuORF	ENST00000349223.9_1_16:68262189-68262411:+|nuORF	ENST00000349223.9_1_16:68262189-68262411:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.8823852539062	2	598.381709	1194.74886	-1.6771	-0.0010036	1.86	0.001113	0.18288	0.00010943	598.3826958044465	40.727	0.40505	41.317	41.083	41.488	0.58915					37	11	4	0	0	0	0.60283	1	3527	3527		44.117	17.424	1	4146200			61253	10319	40915	40932	69352	69352					0.15928020604542326
VIARVPLAIPF	11	Unmodified	_VIARVPLAIPF_					0	0	0		ENST00000349223.9_1_16:68262189-68262411:+|nuORF	ENST00000349223.9_1_16:68262189-68262411:+|nuORF	ENST00000349223.9_1_16:68262189-68262411:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	598.381709	1194.74886	-1.7339	-0.0010376	1.5463	0.00092528	-0.18765	-0.00011228	598.3825106466512	40.786	0.41102	41.178	40.968	41.379	0.39209	-0.069104	-0.00015657	NaN	44.117	40	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3668000			61254	10319	40915	40932							0.15928020604542326
VIASDCGF	8	Unmodified	_VIASDCGF_					0	0	0		ENST00000494718.5_1_X:51641614-51641740:+|nuORF	ENST00000494718.5_1_X:51641614-51641740:+|nuORF	ENST00000494718.5_1_X:51641614-51641740:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2574768066406	2	406.186371	810.35819	0.9592	0.00038961	-0.070847	-2.8777E-05	0.88835	0.00036083	406.1855886662414	39.717	0.21495	39.726	39.601	39.815	0.0092812					6	4	2	0	0	0	0.4196	1	2820	2820		37.028	10.232	1	7756.4			61255	12754	40916	40933	69353	69353					-0.05457483716782008
VIATHTTQ	8	Unmodified	_VIATHTTQ_					0	0	0			REV__ENST00000596663.5_1_2:56403161-56411872:-|nuORF	REV__ENST00000596663.5_1_2:56403161-56411872:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.780029296875	2	435.737617	869.460681	-1.6256	-0.00070835	1.7231	0.00075082	0.097462	4.2468E-05	435.73830314486486	40.011	0.56223	40.018	39.751	40.313	0.0065002					30	13	3	0	0	0	0.4196	1	2495	2495		24.203	12.692	1	288160	+		61256	29259	40917	40934	69354	69354					0.020729253463287023
VIATIGGEPL	10	Unmodified	_VIATIGGEPL_					0	0	0			REV__ENSG00000122965|ENST00000261741|RBM19	REV__ENSG00000122965|ENST00000261741|RBM19	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.28759765625	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.128	1	79.074	78.574	79.574	-0.053558								0	0	0	0.45132	1	7909	7909		23.042	0	1		+		61257	18520	40918	40935	69355	69355					0.06871224728774905
VIATINRIHE	10	Unmodified	_VIATINRIHE_					0	0	0			REV__ENST00000558513.1_1_15:59750825-59752579:+|nuORF	REV__ENST00000558513.1_1_15:59750825-59752579:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.376953125	2	583.33803	1164.66151	-2.9462	-0.0017186	-0.55664	-0.00032471	-3.5028	-0.0020433	583.3374862208152	41.732	0.41363	42.145	41.937	42.351	0.4139					14	10	2	0	0	0	0.37624	1	3703	3703		76.774	32.657	1	291710	+		61258	20545	40919	40936	69356	69356					0.08576194662964554
VIATKLVL	8	Unmodified	_VIATKLVL_					0	0	0		ENSG00000111647|ENST00000279907|BLTP3B;nc|ENSG00000111647|A0JNW5-2|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	429.7506103515625	2	428.796946	855.57934	0.60354	0.0002588	3.6761	0.0015763	4.2796	0.0018351	428.7983114287958	36.209	2.0983	36.491	35.199	37.297	0.28173					79	52	3	0	0	0	0.4196	1	2672	2672		38.806	23.941	1	195850			61259	2594	40920	40937	69357	69357					0.14577324321987817
VIATLLIVD	9	Unmodified	_VIATLLIVD_					0	0	0			REV__ENST00000563168.1_1_16:67262616-67262820:+|nuORF	REV__ENST00000563168.1_1_16:67262616-67262820:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.8043212890625	2	478.804968	955.595384	-2.3035	-0.001103	3.6467	0.0017461	1.3431	0.00064311	478.8065191751703	40.757	0.75594	41.347	40.908	41.664	0.58915					57	21	3	0	0	0	0.7932	1	3538	3538		23.042	0	1	3537500	+		61260	21511	40921	40938	69358	69358					0.11580985768227947
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7798156738281	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.76402	2	2844	2844;2928		35.201	5.2613	1	2581600			61261	13877	40922	40939	69359;69360	69359					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.780029296875	2	434.778754	867.542954	-0.033173	-1.4423E-05	3.6612	0.0015918	3.628	0.0015774	434.78016112068724	33.457	1.6428	33.46	32.362	34.005	0.0030785					82	39	3	0	0	0	0.7932	2	1951	1951;1963		25.45	6.0902	1	229790			61262	13877	40922	40939	69361;69362	69361					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801208496094	2	434.778754	867.542954	-0.14252	-6.1964E-05	3.501	0.0015222	3.3585	0.0014602	434.78017454908985	35.066	1.262	35.054	34.849	36.111	-0.012203					110	29	4	0	0	0	0.67235	1	2138	2138		42.474	7.2737	1	2804500			61263	13877	40922	40939	69363	69363					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77984619140625	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.76402	2	2506	2506;2516		35.201	8.0654	1	3714500			61264	13877	40922	40939	69364;69365	69364					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77984619140625	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.64338	2	3461	3461;3605		44.531	3.9584	1	1294000			61265	13877	40922	40939	69366;69367	69366					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2810363769531	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.67235	1	3884	3884		42.474	7.2737	1	2017500			61266	13877	40922	40939	69368	69368					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7795715332031	2	434.778754	867.542954	-1.1228	-0.00048815	3.4102	0.0014827	2.2874	0.00099453	434.7801032015678	43.351	2.0206	43.315	42.595	44.616	-0.035816					155	47	4	0	0	0	0.67235	1	3503	3503		42.474	7.2737	1	2016300			61267	13877	40922	40939	69369	69369					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7795104980469	2	434.778754	867.542954	-1.003	-0.00043608	3.6101	0.0015696	2.6071	0.0011335	434.7801973515074	45.237	1.8216	45.206	44.189	46.01	-0.031067					113	41	4	0	0	0	0.76402	1	3514	3514		35.201	0	1	1431800			61268	13877	40922	40939	69370	69370					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7794189453125	2	434.778754	867.542954	-0.81007	-0.0003522	3.4341	0.0014931	2.624	0.0011409	434.7801064754335	48.077	2.7534	48.052	47.541	50.295	-0.025112					179	68	4	0	0	0	0.7932	1	3999	3999		19.36	0	1	1940000			61269	13877	40922	40939	69371	69371					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7794189453125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.824	1	57.794	57.294	58.294	-0.029865								0	0	0	0.2969	1	5350	5350		31.955	6.5047	1				61270	13877	40922	40939	69372	69372					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7800598144531	2	434.778754	867.542954	0.085891	3.7343E-05	2.526	0.0010983	2.6119	0.0011356	434.77973178522114	39.697	1.6335	39.706	39.141	40.774	0.0092812					137	39	4	0	0	0	0.76996	1	2838	2838		33.516	3.674	1	4100400			61271	13877	40922	40939	69373	69373					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.779541015625	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.76996	1	3071	3071		33.516	0	1	2766200			61272	13877	40922	40939	69374	69374					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7792663574219	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.67235	1	3432	3432		42.474	15.678	1	2165200			61273	13877	40922	40939	69375	69375					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77984619140625	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.69914	1	2863	2863		40.573	10.069	1	2524800			61274	13877	40922	40939	69376	69376					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7796936035156	2	434.778754	867.542954	-1.6369	-0.00071169	4.2666	0.001855	2.6297	0.0011433	434.7804825082367	43.238	1.5673	43.244	42.525	44.093	0.0057526					133	41	4	0	0	0	0.67235	2	2936	2936;3049		42.474	7.2737	1	2391100			61275	13877	40922	40939	69377;69378	69377					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7798156738281	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.76996	1	3163	3163		33.516	6.7195	1	1177900			61276	13877	40922	40939	69379	69379					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7799072265625	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.76996	1	3494	3494		33.516	1.5607	1	2364100			61277	13877	40922	40939	69380	69380					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77996826171875	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.76996	1	3643	3643		33.516	5.2613	1	1959200			61278	13877	40922	40939	69381	69381					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7802429199219	2	434.778754	867.542954	0.12745	5.5413E-05	3.4254	0.0014893	3.5528	0.0015447	434.7800727481765	33.235	0.77096	33.345	33.052	33.823	0.10991					78	32	3	0	0	0	0.7932	1	1629	1629		20.482	1.1219	1	320750			61279	13877	40922	40939	69382	69382					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.7932	1	2027	2027		26.796	0	1	4737100			61280	13877	40922	40939	69383	69383					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78021240234375	2	434.778754	867.542954	0.17139	7.4517E-05	3.201	0.0013917	3.3724	0.0014663	434.7800235008866	37.854	1.477	37.948	37.639	39.116	0.094318					162	48	4	0	0	0	0.76996	2	2220	2175;2220		33.516	6.5047	1	2203700			61281	13877	40922	40939	69384;69385	69385					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.18498	8.0427E-05	2.9584	0.0012863	3.1434	0.0013667	434.7799222967292	39.501	1.6389	39.589	38.953	40.592	0.088375					151	45	4	0	0	0	0.67235	1	2378	2378		42.474	7.2737	1	4736600			61282	13877	40922	40939	69386	69386					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.779296875	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.49378	1	2676	2676		52.299	4.3836	1	2513700			61283	13877	40922	40939	69387	69387					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7796936035156	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.77546	1	3050	3050		31.955	2.8053	1	2537300			61284	13877	40922	40939	69388	69388					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799377441406	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.76996	1	3096	3096		33.516	6.7195	1	1327200			61285	13877	40922	40939	69389	69389					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799987792969	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.7932	1	1842	1842		25.45	0	1	2158200			61286	13877	40922	40939	69390	69390					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799377441406	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.76996	1	1979	1979		33.516	6.7195	1	4750000			61287	13877	40922	40939	69391	69391					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801513671875	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.67235	1	2295	2295		42.474	7.2737	1	2486400			61288	13877	40922	40939	69392	69392					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77972412109375	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.67235	2	2837	2837;2847		42.474	3.7209	1	2793300			61289	13877	40922	40939	69393;69394	69393					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78009033203125	2	434.778754	867.542954	-0.29603	-0.00012871	3.1388	0.0013647	2.8428	0.001236	434.77998100939635	44.91	1.6932	44.842	44.077	45.77	-0.068634					139	41	4	0	0	0	0.76402	1	3144	3144		35.201	1.6851	1	1190800			61290	13877	40922	40939	69395	69395					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7798156738281	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.67235	1	3457	3457		42.474	5.446	1	2833200			61291	13877	40922	40939	69396	69396					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7790832519531	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.77546	1	3595	3595		31.955	5.1588	1	2175000			61292	13877	40922	40939	69397	69397					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7796630859375	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.76996	1	3343	3343		33.516	6.7195	1	15771000			61293	13877	40922	40939	69398	69398					0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.9525	-0.00084891	5.299	0.0023039	3.3465	0.001455	434.78094655986393	35.016	1.2846	35.016	34.762	36.046	0	0.037886	0.0010239	NaN	42.474	123	34	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2767700			61294	13877	40922	40939							0.10388447425293634
VIAVSVALP	9	Unmodified	_VIAVSVALP_					0	0	0		ENST00000566486.1_1_16:67261036-67261533:+|nuORF;ENST00000567193.5_1_16:67261036-67261779:+|nuORF;ENST00000563953.5_2_16:67261036-67261779:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	ENST00000566486.1_1_16:67261036-67261533:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.778754	867.542954	-1.6522	-0.00071835	5.1323	0.0022314	3.4801	0.0015131	434.78084258463247	34.907	1.3757	34.945	34.746	36.122	0.038643	-0.032843	0.0008789	NaN	42.474	144	44	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2493300			61295	13877	40922	40939							0.10388447425293634
VIAVVLGTMA	10	Unmodified	_VIAVVLGTMA_					0	0	0		nc|ENSG00000172243|Q9BXN2-9|CLEC7A;nc|ENSG00000172243|Q9BXN2-3|CLEC7A;nc|ENSG00000172243|Q9BXN2-4|CLEC7A;ENSG00000172243|ENST00000304084|CLEC7A	nc|ENSG00000172243|Q9BXN2-9|CLEC7A	nc|ENSG00000172243|Q9BXN2-9|CLEC7A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.29193115234375	2	487.291171	972.567789	1.5746	0.00076728	2.5881	0.0012611	4.1627	0.0020284	487.2923164445536	91.172	2.4399	91.105	90.562	93.002	-0.067093					137	58	3	0	0	0	0.6398	1	9656	9656		47.916	9.1095	1	2352400			61296	6754	40923	40940	69399	69399					0.08040759236359918
VICPLISLM	9	Unmodified	_VICPLISLM_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.78009033203125	2	494.782124	987.549696	-0.85772	-0.00042438	-2.6539	-0.0013131	-3.5116	-0.0017375	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.77546	1	8708	8708		31.955	11.473	1	737700			61297	663	40924	40941	69400	69400					0.05542300989998239
VIDAPIEL	8	Unmodified	_VIDAPIEL_					0	0	0			REV__ENSG00000230797|ENST00000429584|YY2	REV__ENSG00000230797|ENST00000429584|YY2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2525939941406	2	435.252569	868.490584	-1.5606	-0.00067925	-1.3016	-0.00056653	-2.8622	-0.0012458	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.86791	1	7905	7905		28.254	0	1	3322700	+		61298	23759	40925	40942	69401	69401					0.05107864291653641
VIDDIRLLLVA	11	Unmodified	_VIDDIRLLLVA_					0	0	0			REV__nc|ENSG00000163468|P49368-2|CCT3	REV__nc|ENSG00000163468|P49368-2|CCT3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8700561523438	2	620.387188	1238.75982	1.282	0.00079533	-1.9739	-0.0012246	-0.69189	-0.00042924	620.3848459643816	97.634	1.8063	97.862	97.287	99.093	0.22787					77	41	3	0	0	0	0.1729	1	10032	10032		14.137	3.2716	1	62441	+		61299	20919	40926	40943	69402	69402					0.1499937818819035
VIDIYTGLP	9	Unmodified	_VIDIYTGLP_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.7790832519531	2	495.778951	989.543348	-0.33921	-0.00016817	0.95476	0.00047335	0.61556	0.00030518	495.77908046755147	77.797	0.73346	78.202	77.895	78.628	0.40531					38	17	4	0	0	0	0.76996	1	8880	8880		33.516	3.0119	1	958180			61300	6162	40927	40944	69403	69403					0.04815822354487409
VIDLPYIPLNR	11	Unmodified	_VIDLPYIPLNR_					0	0	0			REV__nc|ENSG00000070159|P26045-3|PTPN3	REV__nc|ENSG00000070159|P26045-3|PTPN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2572937011719	3	438.258967	1311.75507	0.55491	0.00024319	-3.8316	-0.0016792	-3.2767	-0.001436	438.25727820640566	29.88	1.2979	29.791	29.362	30.659	-0.089544					102	29	5	0	0	0	0.67041	1	2001	2001		36.318	3.5671	1	6394700	+		61301	16596	40928	40945	69404	69404					0.11166494045414765
VIDSDGPLVSK	11	Unmodified	_VIDSDGPLVSK_					0	0	0		ENST00000575310.1_1_17:7346921-7347071:+|nuORF	ENST00000575310.1_1_17:7346921-7347071:+|nuORF	ENST00000575310.1_1_17:7346921-7347071:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.3167114257812	2	565.308603	1128.60265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.34	1	110.39	109.89	110.89	0.054062								0	0	0	0.56276	1	13354	13354		29.17	0	1				61302	14046	40929	40946	69405	69405					0.04349673578008151
VIDTIVLIA	9	Unmodified	_VIDTIVLIA_					0	0	0		nc|ENSG00000185760|Q9NR82-5|KCNQ5;nc|ENSG00000185760|Q9NR82-2|KCNQ5;chr6:73120577-73133421|16|49.25|0.96|5.68|+|ENST00000629977|KCNQ5,KCNQ5;ENSG00000185760|ENST00000370398|KCNQ5;nc|ENSG00000185760|Q9NR82-7|KCNQ5;nc|ENSG00000185760|Q9NR82-3|KCNQ5;nc|ENSG00000185760|Q9NR82-6|KCNQ5;nc|ENSG00000185760|Q9NR82-4|KCNQ5	nc|ENSG00000185760|Q9NR82-5|KCNQ5	nc|ENSG00000185760|Q9NR82-5|KCNQ5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.80743408203125	2	478.804968	955.595384	0.22693	0.00010865	2.6093	0.0012493	2.8362	0.001358	478.8061448766097	39.22	1.8064	39.308	38.205	40.011	0.088375					88	52	2	0	0	0	0.7932	1	2371	2371		23.042	4.7181	1	295310			61303	483	40930	40947	69406	69406					0.11580985768227947
VIDTIVLIA	9	Unmodified	_VIDTIVLIA_					0	0	0		nc|ENSG00000185760|Q9NR82-5|KCNQ5;nc|ENSG00000185760|Q9NR82-2|KCNQ5;chr6:73120577-73133421|16|49.25|0.96|5.68|+|ENST00000629977|KCNQ5,KCNQ5;ENSG00000185760|ENST00000370398|KCNQ5;nc|ENSG00000185760|Q9NR82-7|KCNQ5;nc|ENSG00000185760|Q9NR82-3|KCNQ5;nc|ENSG00000185760|Q9NR82-6|KCNQ5;nc|ENSG00000185760|Q9NR82-4|KCNQ5	nc|ENSG00000185760|Q9NR82-5|KCNQ5	nc|ENSG00000185760|Q9NR82-5|KCNQ5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.80548095703125	2	478.804968	955.595384	0.0084327	4.0376E-06	1.0128	0.00048494	1.0212	0.00048897	478.8053762340742	40.542	0.9838	40.495	39.813	40.797	-0.04789					47	34	2	0	0	0	0.7932	1	2579	2579		21.96	0	1	322510			61304	483	40930	40947	69407	69407					0.11580985768227947
VIEIMTETR	9	Oxidation (M)	_VIEIM(Oxidation (M))TETR_		VIEIM(1)TETR		VIEIM(62)TETR	0	0	1		ENST00000396326.2_1_10:30807341-30807599:-|nuORF	ENST00000396326.2_1_10:30807341-30807599:-|nuORF	ENST00000396326.2_1_10:30807341-30807599:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.2885131835938	2	554.289356	1106.56416	-1.378	-0.00076384	-0.52897	-0.0002932	-1.907	-0.001057	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.33718	1	2304	2304		62.107	10.772	1	328550			61305	11115	40931	40948	69408	69408		182			0.015140446718305611
VIEKGDEHY	9	Unmodified	_VIEKGDEHY_					0	0	0			REV__ENST00000478000.5_1_7:938560-944975:-|nuORF	REV__ENST00000478000.5_1_7:938560-944975:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.26220703125	2	545.264196	1088.51384	0.11097	6.0506E-05	-0.62947	-0.00034323	-0.51851	-0.00028272	545.2637562071981	52.69	0.76491	52.666	52.327	53.092	-0.023849					28	18	2	0	0	0	0.58668	1	4661	4661		47.657	4.7931	1	191670	+		61306	17585	40932	40949	69409	69409					-0.026877416616798655
VIELIIQLPSN	11	Unmodified	_VIELIIQLPSN_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.869384765625	2	619.871371	1237.72819	1.2689	0.00078657	-4.3721	-0.0027101	-3.1032	-0.0019236	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.73893	1	9979	9979		24.519	0.99649	1	6493200			61307	8353	40933	40950	69410	69410					0.11883385434248339
VIELIIQLPSN	11	Unmodified	_VIELIIQLPSN_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8678588867188	2	619.871371	1237.72819	0.5439	0.00033715	-3.7831	-0.002345	-3.2392	-0.0020079	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.73893	1	11238	11238		24.519	1.9395	1	1280900			61308	8353	40933	40950	69411	69411					0.11883385434248339
VIEMLLVLS	9	Unmodified	_VIEMLLVLS_					0	0	0			REV__ENST00000366644.3_1_1:231475179-231480431:+|nuORF	REV__ENST00000366644.3_1_1:231475179-231480431:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.807861328125	2	508.806654	1015.59875	0.80209	0.00040811	1.7861	0.00090878	2.5882	0.0013169	508.8074220934711	82.728	1.203	83.202	82.795	83.998	0.47383					78	28	4	0	0	0	0.77546	1	9624	9624		31.955	0.42505	1	3379300	+		61309	25528	40934	40951	69412	69412					0.09157912550585934
VIEPYKKVLSH	11	Unmodified	_VIEPYKKVLSH_					0	0	0		nc|ENSG00000163141|Q7Z465-3|BNIPL;nc|ENSG00000163141|Q7Z465-2|BNIPL;ENSG00000163141|ENST00000368931|BNIPL	nc|ENSG00000163141|Q7Z465-3|BNIPL	nc|ENSG00000163141|Q7Z465-3|BNIPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2578125	3	438.258967	1311.75507	0.21129	9.2599E-05	-2.9562	-0.0012956	-2.7449	-0.001203	438.2576083423229	29.948	1.2574	29.973	29.652	30.909	0.025013					91	35	4	0	0	0	0.67762	1	1508	1508		35.178	4.6094	1	433100			61310	5770	40935	40952	69413	69413					0.11166494045414765
VIEQRDKLVD	10	Unmodified	_VIEQRDKLVD_					0	0	0		nc|ENSG00000133816|O94851|MICAL2	nc|ENSG00000133816|O94851|MICAL2	nc|ENSG00000133816|O94851|MICAL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5642395019531	3	405.562827	1213.66665	0.39528	0.00016031	4.3969	0.0017832	4.7922	0.0019435	405.56450530615757	63.272	1.3532	63.394	62.754	64.107	0.12253					138	58	3	0	0	0	0.86471	1	5530	5530		22.562	6.0317	1	242080			61311	14929	40936	40953	69414	69414					0.0683645373494528
VIETLTGSHK	10	Unmodified	_VIETLTGSHK_					0	0	0		ENSG00000185737|ENST00000372141|NRG3;nc|ENSG00000185737|P56975-2|NRG3;nc|ENSG00000185737|P56975|NRG3;nc|ENSG00000185737|P56975-3|NRG3	ENSG00000185737|ENST00000372141|NRG3	ENSG00000185737|ENST00000372141|NRG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	542.8035888671875	2	542.803488	1083.59242	0.095296	5.1727E-05	-0.033887	-1.8394E-05	0.061409	3.3333E-05	542.8032653042026	33.942	0.70278	34.152	33.901	34.604	0.21003					40	16	3	0	0	0	0.51302	1	2487	2487		54.776	5.3348	1	834600			61312	7739	40937	40954	69415	69415					0.053971106434119065
VIEVRSNPRPV	11	Unmodified	_VIEVRSNPRPV_					0	0	0			REV__ENSG00000198929|ENST00000361897|NOS1AP	REV__ENSG00000198929|ENST00000361897|NOS1AP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3695678710938	2	633.369861	1264.72517	-0.087569	-5.5464E-05	-0.98413	-0.00062332	-1.0717	-0.00067878	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.67778	1	9968	9968		35.152	3.6222	1	7059800	+		61313	23419	40938	40955	69416	69416					0.1033955510006308
VIEVRSNPRPV	11	Unmodified	_VIEVRSNPRPV_					0	0	0			REV__ENSG00000198929|ENST00000361897|NOS1AP	REV__ENSG00000198929|ENST00000361897|NOS1AP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3681030273438	2	633.369861	1264.72517	0.88638	0.00056141	-2.1201	-0.0013428	-1.2337	-0.0007814	633.3684171121079	95.652	2.5841	95.815	94.207	96.791	0.16316					229	61	4	0	0	0	0.7434	1	9694	9694		23.523	0	1	5166300	+		61314	23419	40938	40955	69417	69417					0.1033955510006308
VIFANNKE	8	Unmodified	_VIFANNKE_					0	0	0			REV__chr21:17598824-17608972|38|10.95|0.57|4.26|-|1|BTG3,BTG3|1	REV__chr21:17598824-17608972|38|10.95|0.57|4.26|-|1|BTG3,BTG3|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.7551574707031	2	467.753267	933.491981	-1.5655	-0.00073227	1.4243	0.00066624	-0.14117	-6.6032E-05	467.75393782612105	56.605	0.85083	56.605	56.397	57.248	0					52	39	2	0	0	0	0.84341	1	4869	4869		24.203	0	1	386030	+		61315	15782	40939	40956	69418	69418					0.022574983804133808
VIFHPTQP	8	Unmodified	_VIFHPTQP_					0	0	0		nc|ENSG00000261236|Q14137-2|BOP1;ENSG00000261236|ENST00000569669|BOP1	nc|ENSG00000261236|Q14137-2|BOP1	nc|ENSG00000261236|Q14137-2|BOP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.7597961425781	2	469.758352	937.502152	0.22864	0.00010741	4.3938	0.002064	4.6224	0.0021714	469.7603126237485	40.263	1.3568	40.345	40.004	41.361	0.081345					62	45	2	0	0	0	0.884	1	2518	2518		33.516	4.366	1	459690			61316	8923	40940	40957	69419	69419					0.030901061056511026
VIFLILAGAT	10	Unmodified	_VIFLILAGAT_					0	0	0		nc|ENSG00000124568|Q14916-2|SLC17A1;ENSG00000124568|ENST00000244527|SLC17A1	nc|ENSG00000124568|Q14916-2|SLC17A1	nc|ENSG00000124568|Q14916-2|SLC17A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.2889404296875	2	509.320786	1016.62702	-0.50226	-0.00025581	3.721	0.0018952	3.2188	0.0016394	509.32269002742794	23.877	0.089334	23.932	23.885	23.974	0.054291					4	2	2	0	0	0	0.37624	1	786	786		11.511	0	1	14491			61317	3341	40941	40958	69420	69420					0.11936978522169284
VIFRAVAITD	10	Unmodified	_VIFRAVAITD_					0	0	0			REV__ENST00000608437.5_1_7:124532851-124555666:-|nuORF	REV__ENST00000608437.5_1_7:124532851-124555666:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.305908203125	2	552.824224	1103.63389	0.78058	0.00043152	-0.13618	-7.5285E-05	0.6444	0.00035624	552.8221410215145	92.643	0.58904	92.802	92.411	93	0.15874					20	13	2	0	0	0	0.37624	1	9406	9406		31.53	15.057	1	66582	+		61318	29396	40942	40959	69421	69421					0.08622291402753035
VIFSLAVLAL	10	Unmodified	_VIFSLAVLAL_					0	0	0			REV__ENSG00000166068|ENST00000299084|SPRED1	REV__ENSG00000166068|ENST00000299084|SPRED1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.336436	1044.65832	-0.041299	-2.1613E-05	-4.0322	-0.0021102	-4.0735	-0.0021318	523.3341749558174	89.553	0.21698	89.622	89.514	89.731	0.068703					6	4	2	0	0	0	0.37624	1	9141	9141		31.955	7.7521	1	47946	+		61319	21247	40943	40960	69422	69422					0.13777551556268008
VIFTGGVGK	9	Unmodified	_VIFTGGVGK_					0	0	0		ENST00000473474.5_1_1:111715860-111726929:+|nuORF;ENSG00000134255|ENST00000357172|CEPT1	ENST00000473474.5_1_1:111715860-111726929:+|nuORF	ENST00000473474.5_1_1:111715860-111726929:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	439.2606506347656	2	439.260728	876.506903	-2.0099	-0.00088287	1.9511	0.00085703	-0.05883	-2.5842E-05	439.2614409657983	42.229	1.0797	42.643	42.237	43.316	0.4139					54	26	4	0	0	0	0.51592	1	3752	3752		51.193	1.9819	1	2668200			61320	3920	40944	40961	69423	69423					0.06370990248433372
VIFTHSYK	8	Unmodified	_VIFTHSYK_					0	0	0			REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|37|3|sense	REV__L1MB7_dup20970|chr19:338201-339583:+|1.183686837402368|0.4787083863683782|1.31|63.0|37|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.76910400390625	2	497.77146	993.528367	2.1836	0.001087	-3.0969	-0.0015415	-0.91325	-0.00045459	497.7697728239385	26.206	1.1075	25.866	25.53	26.637	-0.34035					61	24	4	0	0	0	0.884	1	1474	1474		33.516	0.70317	1	2042700	+		61321	29523	40945	40962	69424	69424					0.031343752771249456
VIFTLGGT	8	Unmodified	_VIFTLGGT_					0	0	0		chr14:21978724-21978826|35|15.71|0.91|4.11|+|2|TRAV8-6,TRAV8-6|1;nc|ENSG00000211795|A0A0B4J262|TRAV8-6;nc|ENSG00000211790|P01737|TRAV8-4;nc|ENSG00000211786|A0A0B4J237|TRAV8-2	chr14:21978724-21978826|35|15.71|0.91|4.11|+|2|TRAV8-6,TRAV8-6|1	chr14:21978724-21978826|35|15.71|0.91|4.11|+|2|TRAV8-6,TRAV8-6|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.2339782714844	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.87922	1	8362	8362		31.955	5.1588	1	4227600			61322	161	40946	40963	69425	69425					0.04283612465758324
VIFVLESVF	9	Unmodified	_VIFVLESVF_					0	0	0		nc|ENSG00000006283|O43497-27|CACNA1G;nc|ENSG00000006283|O43497-15|CACNA1G;nc|ENSG00000006283|O43497-13|CACNA1G;nc|ENSG00000006283|O43497-6|CACNA1G;nc|ENSG00000006283|O43497-17|CACNA1G;nc|ENSG00000006283|O43497-11|CACNA1G;nc|ENSG00000006283|O43497-25|CACNA1G;nc|ENSG00000006283|O43497-21|CACNA1G;nc|ENSG00000006283|O43497-9|CACNA1G;nc|ENSG00000006283|O43497-8|CACNA1G;nc|ENSG00000006283|O43497-16|CACNA1G;nc|ENSG00000006283|O43497-7|CACNA1G;nc|ENSG00000006283|O43497-12|CACNA1G;nc|ENSG00000006283|O43497-33|CACNA1G;nc|ENSG00000006283|O43497-4|CACNA1G;nc|ENSG00000006283|O43497-20|CACNA1G;nc|ENSG00000006283|O43497-10|CACNA1G;nc|ENSG00000006283|O43497-34|CACNA1G;nc|ENSG00000006283|O43497-22|CACNA1G;nc|ENSG00000006283|O43497-2|CACNA1G;nc|ENSG00000006283|O43497-29|CACNA1G;nc|ENSG00000006283|O43497-30|CACNA1G;nc|ENSG00000006283|O43497-32|CACNA1G;nc|ENSG00000006283|O43497-31|CACNA1G;nc|ENSG00000006283|O43497-5|CACNA1G;nc|ENSG00000006283|O43497-19|CACNA1G;nc|ENSG00000006283|O43497-28|CACNA1G;nc|ENSG00000006283|O43497-18|CACNA1G;nc|ENSG00000006283|O43497-23|CACNA1G;nc|ENSG00000006283|O43497-26|CACNA1G;nc|ENSG00000006283|O43497-3|CACNA1G;nc|ENSG00000006283|O43497-36|CACNA1G;nc|ENSG00000006283|O43497-35|CACNA1G;nc|ENSG00000006283|O43497-24|CACNA1G;ENSG00000006283|ENST00000359106|CACNA1G	nc|ENSG00000006283|O43497-27|CACNA1G	nc|ENSG00000006283|O43497-27|CACNA1G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	527.3054809570312	2	526.804968	1051.59538	0.81509	0.00042939	-0.4963	-0.00026145	0.31879	0.00016794	526.8069736704849	99.203	1.8022	99.359	98.454	100.26	0.15659					134	41	5	0	0	0	0.76996	1	10317	10317		33.516	3.0119	1	2351200			61323	697	40947	40964	69426	69426					0.07164985768213228
VIFVVLENM	9	Unmodified	_VIFVVLENM_					0	0	0			REV__ENSG00000170953|ENST00000306842|OR8B12	REV__ENSG00000170953|ENST00000306842|OR8B12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	532.1860961914062	2	532.296453	1062.57835	-0.24891	-0.00013249	2.9444	0.0015673	2.6955	0.0014348	532.2977210071758	48.302	0.56472	49.206	48.925	49.489	0.90424					16	13	2	0	0	0	0.20789	1	4702	4702		47.916	32.274	1	138690	+		61324	21705	40948	40965	69427	69427					0.04956741890782723
VIFVVLENM	9	Unmodified	_VIFVVLENM_					0	0	0			REV__ENSG00000170953|ENST00000306842|OR8B12	REV__ENSG00000170953|ENST00000306842|OR8B12	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	532.296453	1062.57835	-0.51582	-0.00027457	3.6135	0.0019235	3.0977	0.0016489	532.2984247977196	48.485	0.24632	48.955	48.788	49.035	0.46941	-0.12577	0.00036209	NaN	47.916	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109180	+		61325	21705	40948	40965							0.04956741890782723
VIGASSQFTRN	11	Unmodified	_VIGASSQFTRN_					0	0	0		nc|ENSG00000136940|Q13371-2|PDCL;ENSG00000136940|ENST00000259467|PDCL	nc|ENSG00000136940|Q13371-2|PDCL	nc|ENSG00000136940|Q13371-2|PDCL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.3096923828125	2	590.309469	1178.60439	-1.7703	-0.001045	1.5027	0.00088708	-0.26753	-0.00015792	590.3101530818265	32.444	0.60775	32.438	32.214	32.822	-0.0061455					35	14	3	0	0	0	0.61369	1	1834	1834		42.864	7.7122	1	138260			61326	4164	40949	40966	69428	69428					0.022227273866064934
VIGCSGWR	8	Unmodified	_VIGCSGWR_					0	0	0		ENST00000558911.1_1_15:99874300-99893998:+|nuORF	ENST00000558911.1_1_15:99874300-99893998:+|nuORF	ENST00000558911.1_1_15:99874300-99893998:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2207946777344	2	439.22108	876.427607	0.44279	0.00019448	0.10981	4.823E-05	0.5526	0.00024271	439.2210431258967	17.965	1.012	17.343	17.147	18.159	-0.62141					33	23	2	0	0	0	0.86288	1	344	344		26.796	0	1	179400			61327	13798	40950	40967	69429	69429					-0.015549799773680206
VIGDLHLTVP	10	Unmodified	_VIGDLHLTVP_					0	0	0			REV__ENSG00000103043|ENST00000261776|VAC14	REV__ENSG00000103043|ENST00000261776|VAC14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.3112182617188	2	532.310949	1062.60735	0.024653	1.3123E-05	-0.30627	-0.00016303	-0.28162	-0.00014991	532.3106644683548	34.756	0.64537	34.7	34.401	35.047	-0.056385					27	14	2	0	0	0	0.8608	1	2206	2206		34.173	7.4796	1	143800	+		61328	17380	40951	40968	69430	69430					0.0785460251142922
VIGGFECT	8	Unmodified	_VIGGFECT_					0	0	0		ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.1938171386719	2	413.194196	824.37384	0.071072	2.9367E-05	-2.539	-0.0010491	-2.4679	-0.0010197	413.19345857081765	82.462	1.3534	82.936	82.432	83.785	0.47383					89	32	5	0	0	0	0.86288	2	9556	9556;9568		26.796	1.3459	1	2653900			61329	6162	40952	40969	69431;69432	69431					-0.0453719719973833
VIGGNLVQHS	10	Unmodified	_VIGGNLVQHS_					0	0	0			REV__nc|ENSG00000127603|Q9UPN3|MACF1	REV__nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	512.28271484375	2	512.282723	1022.55089	0.68771	0.0003523	-3.3979	-0.0017407	-2.7102	-0.0013884	512.280910573943	86.397	3.3825	86.546	85.297	88.68	0.14902					148	79	2	0	0	0	0.70553	1	8477	8477		44.377	3.8046	1	371240	+		61330	18743	40953	40970	69433	69433					0.0405197467475773
VIGGVLLY	8	Unmodified	_VIGGVLLY_					0	0	0			REV__ENSG00000281106|ENST00000629372|TMEM272	REV__ENSG00000281106|ENST00000629372|TMEM272	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.25836181640625	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.84567	1	566	566		24.504	0	1	679020	+		61331	24047	40954	40971	69434	69434					0.08288775879509558
VIGKKGKH	8	Unmodified	_VIGKKGKH_					0	0	0		ENST00000470100.1_1_2:96072692-96076397:+|nuORF;ENST00000463096.5_1_2:97751812-97756058:-|nuORF;ENSG00000144199|ENST00000414820|FAHD2B;ENSG00000115042|ENST00000233379|FAHD2A;ENST00000607780.5_1_2:96676383-96687353:+|nuORF	ENST00000470100.1_1_2:96072692-96076397:+|nuORF	ENST00000470100.1_1_2:96072692-96076397:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7799987792969	2	433.782162	865.549771	-1.7067	-0.00074033	-2.7555	-0.0011953	-4.4622	-0.0019356	433.7819459773158	51.312	5.3307	51.312	50.734	56.065	0					552	155	5	0	0	0	0.81548	1	4583	4583		20.482	6.7065	1	1514200			61332	2808	40955	40972	69435	69435					0.11161805096514854
VIGKKGKH	8	Unmodified	_VIGKKGKH_					0	0	0		ENST00000470100.1_1_2:96072692-96076397:+|nuORF;ENST00000463096.5_1_2:97751812-97756058:-|nuORF;ENSG00000144199|ENST00000414820|FAHD2B;ENSG00000115042|ENST00000233379|FAHD2A;ENST00000607780.5_1_2:96676383-96687353:+|nuORF	ENST00000470100.1_1_2:96072692-96076397:+|nuORF	ENST00000470100.1_1_2:96072692-96076397:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78021240234375	2	433.782162	865.549771	0.28843	0.00012512	-3.8544	-0.001672	-3.566	-0.0015469	433.78110763255734	50.946	4.0891	50.995	50.343	54.432	0.049896					422	122	5	0	0	0	0.82419	1	4425	4425		13.775	0.81615	1	4871400			61333	2808	40955	40972	69436	69436					0.11161805096514854
VIGKKGKH	8	Unmodified	_VIGKKGKH_					0	0	0		ENST00000470100.1_1_2:96072692-96076397:+|nuORF;ENST00000463096.5_1_2:97751812-97756058:-|nuORF;ENSG00000144199|ENST00000414820|FAHD2B;ENSG00000115042|ENST00000233379|FAHD2A;ENST00000607780.5_1_2:96676383-96687353:+|nuORF	ENST00000470100.1_1_2:96072692-96076397:+|nuORF	ENST00000470100.1_1_2:96072692-96076397:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	433.782162	865.549771	0.071583	3.1051E-05	-2.2526	-0.00097714	-2.181	-0.00094609	433.78139049404456	50.839	0.57984	51.274	51.161	51.74	0.43505	-0.019012	0.00027258	NaN	20.482	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	123430			61334	2808	40955	40972							0.11161805096514854
VIGKLIQC	8	Unmodified	_VIGKLIQC_					0	0	0		ENST00000521314.5_1_16:67198707-67203685:+|nuORF;nc|ENSG00000102878|Q9ULV5-2|HSF4;ENSG00000102878|ENST00000521374|HSF4	ENST00000521314.5_1_16:67198707-67203685:+|nuORF	ENST00000521314.5_1_16:67198707-67203685:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.7667236328125	2	437.264956	872.515359	-0.37471	-0.00016385	2.1781	0.00095241	1.8034	0.00078857	437.26588535001247	22.862	1.4868	22.81	22.425	23.912	-0.052219					125	47	5	0	0	0	0.82464	1	851	851		21.702	2.3424	1	970200			61335	2027	40956	40973	69437	69437					0.07400220893396181
VIGKRGSDIII	11	Unmodified	_VIGKRGSDIII_					0	0	0		nc|ENSG00000114491|P11172-4|UMPS;nc|ENSG00000114491|P11172-2|UMPS;nc|ENSG00000114491|P11172-3|UMPS;ENSG00000114491|ENST00000232607|UMPS	nc|ENSG00000114491|P11172-4|UMPS	nc|ENSG00000114491|P11172-4|UMPS	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.866455078125	2	585.86388	1169.71321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.831	1	26.491	25.991	26.991	-0.34035								0	0	0	0.56276	1	1512	1512		28.081	0.19925	1				61336	2775	40957	40974	69438	69438					0.13513938356913968
VIGLVLRL	8	Unmodified	_VIGLVLRL_					0	0	0			REV__ENSG00000181408|ENST00000313135|UTS2R	REV__ENSG00000181408|ENST00000313135|UTS2R	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.8084411621094	2	441.810388	881.606223	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.53	1	18.9	18.4	19.4	-0.6296								0	0	0	0.30784	1	533	533		14.664	0	1		+		61337	22457	40958	40975	69439	69439					0.16068432933172971
VIGLVTFYRIG	11	Unmodified	_VIGLVTFYRIG_					0	0	0		ENSG00000131634|ENST00000566264|TMEM204	ENSG00000131634|ENST00000566264|TMEM204	ENSG00000131634|ENST00000566264|TMEM204	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.3724365234375	2	619.368798	1236.72304	1.27	0.0007866	3.6702	0.0022732	4.9402	0.0030598	619.3710394706492	101.41	0.94493	101.61	101.32	102.26	0.2058					77	22	4	0	0	0	0.72918	1	10683	10683		26.693	1.1189	1	2074300			61338	3740	40959	40976	69440	69440					0.11415126362248884
VIGQDPKQ	8	Unmodified	_VIGQDPKQ_					0	0	0			REV__ENST00000491950.5_1_X:123480470-123505238:+|nuORF	REV__ENST00000491950.5_1_X:123480470-123505238:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7447204589844	2	442.745442	883.476331	0.24971	0.00011056	-1.799	-0.0007965	-1.5493	-0.00068594	442.74454650481835	88.729	0.69301	89.178	88.753	89.446	0.44892					54	16	4	0	0	0	0.89494	1	10484	10484		37.159	1.5408	1	6816600	+		61339	22635	40960	40977	69441	69441					0.029932118633723803
VIGTVTSGK	9	Unmodified	_VIGTVTSGK_					0	0	0		ENSG00000117601|ENST00000367698|SERPINC1	ENSG00000117601|ENST00000367698|SERPINC1	ENSG00000117601|ENST00000367698|SERPINC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.2555236816406	2	431.255643	860.496732	2.162	0.00093236	-1.7643	-0.00076088	0.39763	0.00017148	431.2547476595698	26.781	1.1044	26.441	26.006	27.11	-0.34035					59	24	4	0	0	0	0.11055	2	1519	1506;1519		90.37	5.4543	1	998670			61340	2990	40961	40978	69442;69443	69443					0.06090382523200333
VIHGHTVD	8	Unmodified	_VIHGHTVD_					0	0	0		ENSG00000144120|ENST00000272521|TMEM177	ENSG00000144120|ENST00000272521|TMEM177	ENSG00000144120|ENST00000272521|TMEM177	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.2513122558594	2	439.229959	876.445365	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.058	1	16.975	16.475	17.475	-0.0821								0	0	0	0.30609	1	199	199		44.531	7.5026	1				61341	4691	40962	40979	69444	69444					0.0022005854913231815
VIHIKMKN	8	Unmodified	_VIHIKMKN_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957458496094	2	491.796955	981.579357	0.34914	0.0001717	-2.6215	-0.0012892	-2.2724	-0.0011175	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.80706	1	4088	4088		19.36	0	1	581270	+		61342	22575	40963	40980	69445	69445					0.08783001050346684
VIHNSWIDPK	10	Unmodified	_VIHNSWIDPK_					0	0	0		ENSG00000172209|ENST00000304402|GPR22	ENSG00000172209|ENST00000304402|GPR22	ENSG00000172209|ENST00000304402|GPR22	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7054138183594	3	403.552262	1207.63496	1.4763	0.00059578	-4.2749	-0.0017252	-2.7986	-0.0011294	403.550371196445	25.582	0.99189	25.324	24.954	25.946	-0.2572					19	11	2	0	0	0	0.37624	1	1290	1290		19.263	0	1	129860			61343	6752	40964	40981	69446	69446					0.039445057716420706
VIIAELTN	8	Unmodified	_VIIAELTN_					0	0	0		ENSG00000091136|ENST00000222399|LAMB1	ENSG00000091136|ENST00000222399|LAMB1	ENSG00000091136|ENST00000222399|LAMB1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7747802734375	2	436.758018	871.501483	0.647	0.00028258	1.3306	0.00058117	1.9776	0.00086375	436.7581021210789	90.743	0.39518	90.896	90.639	91.034	0.15388					12	9	2	0	0	0	0.4196	1	9110	9110		29.15	4.9468	1	92357			61344	1668	40965	40982	69447	69447					0.06059266665931773
VIIAQQPSPAL	11	Unmodified	_VIIAQQPSPAL_					0	0	0			REV__ENST00000515045.1_1_5:177059209-177059329:-|nuORF	REV__ENST00000515045.1_1_5:177059209-177059329:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8534545898438	2	568.837331	1135.66011	0.87002	0.0004949	-1.8527	-0.0010539	-0.98266	-0.00055898	568.83696503943	102.62	0.41098	102.75	102.48	102.89	0.12622					10	5	3	0	0	0	0.17226	1	10792	10792		42.864	0	1	108270	+		61345	28024	40966	40983	69448	69448					0.09770560574224874
VIIEIPTRA	9	Unmodified	_VIIEIPTRA_					0	0	0		ENSG00000175426|ENST00000311106|PCSK1;nc|ENSG00000175426|P29120-2|PCSK1;ENST00000513085.1_1_5:95728707-95748688:-|nuORF	ENSG00000175426|ENST00000311106|PCSK1	ENSG00000175426|ENST00000311106|PCSK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.3121032714844	2	506.313492	1010.61243	-0.75915	-0.00038437	2.6538	0.0013437	1.8947	0.00095931	506.3150182633057	63.277	0.21601	63.665	63.575	63.791	0.38779					5	4	2	0	0	0	0.20789	1	6806	6806		55.504	0	1	44199			61346	7015	40967	40984	69449	69449					0.1075490637402936
VIIEPPAS	8	Unmodified	_VIIEPPAS_					0	0	0		ENSG00000204165|ENST00000374251|CXorf65	ENSG00000204165|ENST00000374251|CXorf65	ENSG00000204165|ENST00000374251|CXorf65	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.237548828125	2	413.239461	824.46437	-1.33	-0.0005496	-1.1028	-0.00045573	-2.4328	-0.0010053	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.884	1	7129	7129		33.516	0	1	895630			61347	8420	40968	40985	69450	69450					0.045115951201864846
VIIEPPAS	8	Unmodified	_VIIEPPAS_					0	0	0		ENSG00000204165|ENST00000374251|CXorf65	ENSG00000204165|ENST00000374251|CXorf65	ENSG00000204165|ENST00000374251|CXorf65	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.23785400390625	2	413.239461	824.46437	-1.5467	-0.00063915	0.5911	0.00024426	-0.95558	-0.00039489	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.85277	1	7222	7222		25.45	2.4077	1	1341700			61348	8420	40968	40985	69451	69451					0.045115951201864846
VIIFLLLLLVL	11	Unmodified	_VIIFLLLLLVL_					0	0	0			REV__ENSG00000179363|ENST00000319560|TMEM31	REV__ENSG00000179363|ENST00000319560|TMEM31	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.87451171875	2	634.951436	1267.88832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.087	1	67.139	66.639	67.639	0.052368								0	0	0	0.56276	1	5963	5963		6.7355	0	1		+		61349	22333	40969	40986	69452	69452					0.26508965169250587
VIIFTMKVTR	10	Unmodified	_VIIFTMKVTR_					0	0	0			REV__ENSG00000180914|ENST00000316793|OXTR	REV__ENSG00000180914|ENST00000316793|OXTR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.2469482421875	3	403.245893	1206.71585	-0.96193	-0.00038789	3.4907	0.0014076	2.5288	0.0010197	403.2472281244655	104.88	3.5231	104.88	103.72	107.24	0					230	83	5	0	0	0	0.85466	1	10895	10895		14.694	0.60766	1	5402700	+		61350	22425	40970	40987	69453	69453					0.12076070490184065
VIIGSSGTK	9	Unmodified	_VIIGSSGTK_					0	0	0			REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2556457519531	2	431.255643	860.496732	-0.20395	-8.7954E-05	0.53799	0.00023201	0.33405	0.00014406	431.25575551431126	26.766	1.3401	26.591	26.027	27.367	-0.17559					69	29	4	0	0	0	0.084975	1	1492	1492		96.19	3.0472	1	1047400	+		61351	18629	40971	40988	69454	69454					0.06090382523188964
VIIGSSGTK	9	Unmodified	_VIIGSSGTK_					0	0	0			REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	431.255643	860.496732	-2.0806	-0.00089729	2.1186	0.00091367	0.037991	1.6384E-05	431.25625308344985	26.423	0.33411	26.423	26.151	26.485	0	0.082903	0.0022274	NaN	96.19	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39689	+		61352	18629	40971	40988							0.06090382523188964
VIIGSSGTK	9	Unmodified	_VIIGSSGTK_					0	0	0			REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	431.255643	860.496732	0.47084	0.00020305	0.30083	0.00012973	0.77166	0.00033278	431.2553748434588	26.066	0.39634	26.112	25.905	26.301	0.045509	-0.22817	0.00065953	NaN	96.19	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26864	+		61353	18629	40971	40988							0.06090382523188964
VIIGSSGTK	9	Unmodified	_VIIGSSGTK_					0	0	0			REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	431.255643	860.496732	-0.36232	-0.00015625	0.016601	7.1595E-06	-0.34572	-0.00014909	431.2552011831229	26.26	0.50159	26.222	25.982	26.483	-0.038523	-0.11816	0.00041439	NaN	96.19	19	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29821	+		61354	18629	40971	40988							0.06090382523188964
VIIGSSGTK	9	Unmodified	_VIIGSSGTK_					0	0	0			REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	431.255643	860.496732	2.0983	0.00090491	-2.1342	-0.00092038	-0.035866	-1.5468E-05	431.25454994735	26.284	0.54399	26.252	26.057	26.601	-0.032125	-0.087975	-0.0014407	NaN	96.19	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36052	+		61355	18629	40971	40988							0.06090382523188964
VIILLFDW	8	Unmodified	_VIILLFDW_					0	0	0			REV__ENST00000425528.5_3_19:12810876-12810975:-|nuORF	REV__ENST00000425528.5_3_19:12810876-12810975:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8036804199219	2	509.802229	1017.5899	0.66528	0.00033916	2.166	0.0011042	2.8313	0.0014434	509.80330176373235	84.326	2.5006	84.474	83.057	85.557	0.14794					163	57	4	0	0	0	0.87276	1	8328	8328		29.842	0	1	928020	+		61356	26534	40972	40989	69455	69455					0.08181306976416636
VIINGHYHE	9	Unmodified	_VIINGHYHE_					0	0	0			REV__ENST00000504321.1_1_4:56755058-56759725:+|nuORF	REV__ENST00000504321.1_1_4:56755058-56759725:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.3622436523438	2	541.274898	1080.53524	-2.19	-0.0011854	1.3847	0.00074948	-0.80533	-0.0004359	541.2763522524559	42.707	0.49779	43.404	43.174	43.672	0.69754					32	11	4	0	0	0	0.20789	1	3809	3809		30.504	11.144	1	715130	+		61357	27854	40973	40990	69456	69456					-0.001803118423140404
VIIPGGLTSQ	10	Unmodified	_VIIPGGLTSQ_					0	0	0		ENSG00000143157|ENST00000367876|POGK	ENSG00000143157|ENST00000367876|POGK	ENSG00000143157|ENST00000367876|POGK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.787353515625	2	492.78985	983.565146	-1.6385	-0.00080741	-1.6325	-0.00080449	-3.271	-0.0016119	492.79027443026575	110.95	0.48225	110.94	110.83	111.31	-0.0074387					25	21	2	0	0	0	0.86589	1	11825	11825		29.15	1.2673	1	41549			61358	4606	40974	40991	69457	69457					0.07270627103048355
VIISFPFLL	9	Unmodified	_VIISFPFLL_					0	0	0			REV__ENSG00000182613|ENST00000641492|OR2V2	REV__ENSG00000182613|ENST00000641492|OR2V2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8271484375	2	524.825704	1047.63685	2.9134	0.001529	-0.74099	-0.00038889	2.1724	0.0011401	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.76996	1	10968	10968		33.516	4.366	1	30867000	+		61359	22536	40975	40992	69458	69458					0.1149416652756372
VIISFPFLL	9	Unmodified	_VIISFPFLL_					0	0	0			REV__ENSG00000182613|ENST00000641492|OR2V2	REV__ENSG00000182613|ENST00000641492|OR2V2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.826416015625	2	524.825704	1047.63685	0.82695	0.00043401	2.2696	0.0011912	3.0966	0.0016252	524.826769505368	102.16	1.0919	102.29	101.89	102.98	0.13523					72	26	3	0	0	0	0.76996	1	10844	10844		33.516	8.0654	1	650470	+		61360	22536	40975	40992	69459	69459					0.1149416652756372
VIISTKEL	8	Unmodified	_VIISTKEL_					0	0	0		ENST00000308478.9_1_7:110731416-110762496:+|nuORF	ENST00000308478.9_1_7:110731416-110762496:+|nuORF	ENST00000308478.9_1_7:110731416-110762496:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.7798767089844	2	451.781493	901.548434	-1.7245	-0.00077912	-1.1553	-0.00052195	-2.8799	-0.0013011	451.7808657974631	86.503	1.1616	86.667	86.314	87.476	0.16473					51	26	3	0	0	0	0.89962	1	8473	8473		38.806	3.1879	1	162500			61361	9888	40976	40993	69460	69460					0.09372126217101595
VIITGLKPA	9	Unmodified	_VIITGLKPA_					0	0	0		ENSG00000080224|ENST00000389672|EPHA6;nc|ENSG00000080224|Q9UF33|EPHA6	ENSG00000080224|ENST00000389672|EPHA6	ENSG00000080224|ENST00000389672|EPHA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3008728027344	2	456.299853	910.585153	0.18552	8.4654E-05	2.8375	0.0012948	3.0231	0.0013794	456.3010022539405	33.29	1.7406	33.257	32.935	34.675	-0.032681					212	75	4	0	0	0	0.67345	1	1623	1623		42.396	6.7778	1	1700700			61362	1437	40977	40994	69461	69461					0.1262842283365444
VIIVISFLRLL	11	Unmodified	_VIIVISFLRLL_					0	0	0		nc|ENSG00000165102|Q68CP4|HGSNAT;ENSG00000165102|ENST00000379644|HGSNAT	nc|ENSG00000165102|Q68CP4|HGSNAT	nc|ENSG00000165102|Q68CP4|HGSNAT	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.40576171875	2	643.433941	1284.85333	0.94289	0.00060669	1.4536	0.00093527	2.3965	0.001542	643.4346690381394	105.3	0.19209	105.41	105.28	105.47	0.10766					6	4	2	0	0	0	0.17868	1	11203	11203		14.865	0.72775	1	72717			61363	6045	40978	40995	69462	69462					0.22229722361271342
VIKAWILTKSH	11	Unmodified	_VIKAWILTKSH_					0	0	0			REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|165|3|sense	REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|165|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3921508789062	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.75921	1	12643	12643		19.997	2.5288	1	2297700	+		61364	29484	40979	40996	69463	69463					0.14054504144905877
VIKDHDEP	8	Unmodified	_VIKDHDEP_					0	0	0		ENSG00000103888|ENST00000394685|CEMIP;nc|ENSG00000103888|Q8WUJ3-2|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	ENSG00000103888|ENST00000394685|CEMIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.7402648925781	2	476.740357	951.46616	-0.25171	-0.00012	-0.46383	-0.00022113	-0.71554	-0.00034113	476.74000264040296	29.034	0.30008	28.995	28.816	29.116	-0.039907					15	11	2	0	0	0	0.92457	1	1505	1505		47.916	3.3845	1	17764			61365	2104	40980	40997	69464	69464					-0.011513958618706965
VIKEKVPNVP	10	Unmodified	_VIKEKVPNVP_					0	0	0		nc|ENSG00000102763|A3KMH1-2|VWA8;nc|ENSG00000102763|A3KMH1-3|VWA8;ENSG00000102763|ENST00000379310|VWA8	nc|ENSG00000102763|A3KMH1-2|VWA8	nc|ENSG00000102763|A3KMH1-2|VWA8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	561.8463134765625	2	561.847699	1121.68084	-1.4136	-0.0007942	-2.0959	-0.0011776	-3.5094	-0.0019718	561.8463779100821	96.764	2.3842	96.966	96.53	98.914	0.20207					113	54	4	0	0	0	0.81117	1	9940	9940		38.754	1.5945	1	806770			61366	2016	40981	40998	69465	69465					0.12487150953870696
VIKHWFRNTL	10	Unmodified	_VIKHWFRNTL_					0	0	0		ENSG00000140836|ENST00000268489|ZFHX3;chr16:73456258-73680180|53|17.49|0.14|6.93|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73318336-73456003|47|12.38|0.07|7.55|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73257136-73318240|51|12.71|0.0|20.28|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73143831-73257047|49|21.06|0.1|7.71|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73131094-73143752|54|16.8|0.2|6.36|-|ENST00000641206|ZFHX3,ZFHX3;chr16:73093598-73130968|46|12.0|0.08|7.25|-|ENST00000641206|ZFHX3,ZFHX3;nc|ENSG00000140836|Q15911-2|ZFHX3;chr16:72950965-73058530|60|21.05|0.31|6.07|-|ENST00000397992|ZFHX3,ZFHX3;nc|ENSG00000091656|Q86UP3|ZFHX4;nc|ENSG00000091656|Q86UP3-4|ZFHX4;nc|ENSG00000091656|Q86UP3-2|ZFHX4;ENSG00000091656|ENST00000651372|ZFHX4	ENSG00000140836|ENST00000268489|ZFHX3;nc|ENSG00000091656|Q86UP3|ZFHX4	ENSG00000140836|ENST00000268489|ZFHX3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.5850830078125	3	438.587418	1312.74043	-1.997	-0.00087587	-1.9898	-0.0008727	-3.9868	-0.0017486	438.58651601334884	31.993	0.97123	31.993	31.701	32.672	0					74	39	2	0	0	0	0.86446	1	1627	1627		30.569	5.4429	1	798930			61367	208;1681	40982	40999	69466	69466					0.09656466687943066
VIKLCKDNV	9	Unmodified	_VIKLCKDNV_					0	0	0		ENST00000573622.1_1_12:9795489-9806302:+|nuORF	ENST00000573622.1_1_12:9795489-9806302:+|nuORF	ENST00000573622.1_1_12:9795489-9806302:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7999267578125	2	516.299527	1030.5845	-0.029363	-1.516E-05	2.1339	0.0011017	2.1045	0.0010866	516.3013663532613	57.234	1.5278	57.221	56.762	58.289	-0.012203					115	51	4	0	0	0	0.51307	2	5141	5141;5149		51.335	4.5846	1	678400			61368	14022	40983	41000	69467;69468	69467					0.07043260122304673
VIKLCKDNV	9	Unmodified	_VIKLCKDNV_					0	0	0		ENST00000573622.1_1_12:9795489-9806302:+|nuORF	ENST00000573622.1_1_12:9795489-9806302:+|nuORF	ENST00000573622.1_1_12:9795489-9806302:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.8003540039062	2	516.299527	1030.5845	0.13063	6.7444E-05	1.7671	0.00091234	1.8977	0.00097978	516.3012953413697	57.209	1.6001	57.18	56.732	58.332	-0.028664					105	45	4	0	0	0	0.55097	1	5242	5242		49.442	1.5259	1	661070			61369	14022	40983	41000	69469	69469					0.07043260122304673
VIKLCKDNV	9	Unmodified	_VIKLCKDNV_					0	0	0		ENST00000573622.1_1_12:9795489-9806302:+|nuORF	ENST00000573622.1_1_12:9795489-9806302:+|nuORF	ENST00000573622.1_1_12:9795489-9806302:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.8005981445312	2	516.299527	1030.5845	-0.58657	-0.00030285	2.6779	0.0013826	2.0913	0.0010798	516.3016574074306	57.099	1.4441	57.132	56.795	58.239	0.033184					114	45	4	0	0	0	0.44421	1	5161	5161		54.776	11.912	1	705170			61370	14022	40983	41000	69470	69470					0.07043260122304673
VIKLGVLP	8	Unmodified	_VIKLGVLP_					0	0	0		nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013-4|ARHGEF10;ENSG00000104728|ENST00000349830|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7748107910156	2	419.791664	837.568775	1.4768	0.00061993	3.9041	0.0016389	5.3808	0.0022588	419.7931646047948	42.556	0.12511	42.556	42.452	42.577	0.00016785					4	2	2	0	0	0	0.4196	1	3209	3209		13.775	4.953	1	51213			61371	2143	40984	41001	69471	69471					0.14349341667548288
VIKLGVLP	8	Unmodified	_VIKLGVLP_					0	0	0		nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013-4|ARHGEF10;ENSG00000104728|ENST00000349830|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	419.791664	837.568775	0.21283	8.9343E-05	7.4981	0.0031476	7.7109	0.003237	419.79486854231095	42.608	0.14716	42.579	42.458	42.605	-0.029461	0.011583	0.0022796	NaN	13.775	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33848			61372	2143	40984	41001							0.14349341667548288
VIKLLWKYKK	10	Unmodified	_VIKLLWKYKK_					0	0	0		ENST00000474385.1_1_X:24195956-24197386:+|nuORF	ENST00000474385.1_1_X:24195956-24197386:+|nuORF	ENST00000474385.1_1_X:24195956-24197386:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2554016113281	3	440.291831	1317.85366	-1.5005	-0.00066067	-0.51772	-0.00022795	-2.0183	-0.00088862	440.2913319863296	60.452	0.087387	60.553	60.49	60.577	0.10082					5	4	2	0	0	0	0.37624	1	5231	5231		11.097	7.688	1	48760			61373	12303	40985	41002	69472	69472					0.20745142081091217
VIKNVKASSA	10	Unmodified	_VIKNVKASSA_					0	0	0			REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.8047180175781	2	508.808574	1015.60259	-0.055037	-2.8003E-05	-1.6702	-0.00084983	-1.7253	-0.00087783	508.8076940504988	90.104	1.2492	90.172	89.514	90.764	0.068703					64	28	4	0	0	0	0.8651	1	9193	9193		25.574	0	1	1111600	+		61374	16567	40986	41003	69473	69473					0.09541718368654983
VIKNVKASSA	10	Unmodified	_VIKNVKASSA_					0	0	0			REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.8052062988281	2	508.808574	1015.60259	0.33751	0.00017173	-2.0744	-0.0010555	-1.7369	-0.00088377	508.8074006535315	89.921	1.4701	89.969	89.439	90.909	0.048157					61	34	2	0	0	0	0.86763	1	9279	9279		26.693	2.1737	1	1159300	+		61375	16567	40986	41003	69474	69474					0.09541718368654983
VIKNVKASSA	10	Unmodified	_VIKNVKASSA_					0	0	0			REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.8079833984375	2	508.808574	1015.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.17	1	83.229	82.729	83.729	0.059196								0	0	0	0.45132	1	8352	8352		34.173	5.023	1		+		61376	16567	40986	41003	69475	69475					0.09541718368654983
VIKNVKASSA	10	Unmodified	_VIKNVKASSA_					0	0	0			REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	508.8052062988281	2	508.808574	1015.60259	-0.38303	-0.00019489	-3.6518	-0.001858	-4.0348	-0.0020529	508.80774374343616	89.543	1.6067	89.755	89.176	90.782	0.21271					125	37	6	0	0	0	0.86348	1	8971	8971		31.53	7.0106	1	1485200	+		61377	16567	40986	41003	69476	69476					0.09541718368654983
VIKNVKASSA	10	Unmodified	_VIKNVKASSA_					0	0	0			REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.8063659667969	2	508.808574	1015.60259	0.71176	0.00036215	-2.4409	-0.0012419	-1.7291	-0.00087978	508.807249712291	89.741	1.2834	89.893	89.353	90.637	0.1519					55	29	2	0	0	0	0.86218	2	8973	8973;8985		32.812	5.9558	1	1480000	+		61378	16567	40986	41003	69477;69478	69477					0.09541718368654983
VIKNVKASSA	10	Unmodified	_VIKNVKASSA_					0	0	0			REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	REV__ENST00000504883.1_1_5:61602296-61648542:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.806640625	2	508.808574	1015.60259	0.94338	0.00048	-2.2339	-0.0011366	-1.2905	-0.00065661	508.8073543874404	89.499	0.84901	89.949	89.406	90.255	0.45058					38	21	2	0	0	0	0.86763	1	10576	10576		26.693	2.4902	1	1156600	+		61379	16567	40986	41003	69479	69479					0.09541718368654983
VIKQHLTDFVI	11	Unmodified	_VIKQHLTDFVI_					0	0	0		ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2574768066406	3	438.258967	1311.75507	0.21129	9.2599E-05	-2.9562	-0.0012956	-2.7449	-0.001203	438.2576083423229	29.948	1.2574	29.973	29.652	30.909	0.025013					91	35	4	0	0	0	0.6493	1	1539	1539		38.754	8.1847	1	433100			61380	6488	40987	41004	69480	69480					0.11166494045392028
VIKYLVLVFCL	11	Unmodified	_VIKYLVLVFCL_					0	0	0		ENST00000379484.9_1_X:21901709-21902018:+|nuORF	ENST00000379484.9_1_X:21901709-21902018:+|nuORF	ENST00000379484.9_1_X:21901709-21902018:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2678527832031	3	437.269927	1308.78795	-1.6775	-0.00073351	-3.1272	-0.0013674	-4.8047	-0.0021009	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.76251	1	4573	4573		19.263	3.9296	1	2305800			61381	10893	40988	41005	69481	69481					0.14590984843903243
VILADYKGVSL	11	Unmodified	_VILADYKGVSL_					0	0	0		ENSG00000124120|ENST00000262605|TTPAL	ENSG00000124120|ENST00000262605|TTPAL	ENSG00000124120|ENST00000262605|TTPAL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.34326171875	2	589.344989	1176.67542	-0.36759	-0.00021664	-3.0824	-0.0018166	-3.45	-0.0020332	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.72106	1	9323	9323		28.081	1.3886	1	11103000			61382	3306	40989	41006	69482	69482					0.09415427371436635
VILADYKGVSL	11	Unmodified	_VILADYKGVSL_					0	0	0		ENSG00000124120|ENST00000262605|TTPAL	ENSG00000124120|ENST00000262605|TTPAL	ENSG00000124120|ENST00000262605|TTPAL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3431396484375	2	589.344989	1176.67542	-0.6745	-0.00039751	-2.9294	-0.0017264	-3.6039	-0.002124	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.70737	1	10135	10135		30.318	1.1477	1	16185000			61383	3306	40989	41006	69483	69483					0.09415427371436635
VILADYKGVSL	11	Unmodified	_VILADYKGVSL_					0	0	0		ENSG00000124120|ENST00000262605|TTPAL	ENSG00000124120|ENST00000262605|TTPAL	ENSG00000124120|ENST00000262605|TTPAL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3427124023438	2	589.344989	1176.67542	-0.65438	-0.00038565	-2.8884	-0.0017022	-3.5427	-0.0020879	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.67778	2	9816	9816;9863		35.152	2.4355	1	16804000			61384	3306	40989	41006	69484;69485	69484					0.09415427371436635
VILADYKGVSL	11	Unmodified	_VILADYKGVSL_					0	0	0		ENSG00000124120|ENST00000262605|TTPAL	ENSG00000124120|ENST00000262605|TTPAL	ENSG00000124120|ENST00000262605|TTPAL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3428344726562	2	589.344989	1176.67542	0.83312	0.00049099	-4.3931	-0.002589	-3.5599	-0.002098	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.67778	1	9643	9643		35.152	3.6222	1	20363000			61385	3306	40989	41006	69486	69486					0.09415427371436635
VILADYKGVSL	11	Unmodified	_VILADYKGVSL_					0	0	0		ENSG00000124120|ENST00000262605|TTPAL	ENSG00000124120|ENST00000262605|TTPAL	ENSG00000124120|ENST00000262605|TTPAL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3427734375	2	589.344989	1176.67542	-1.324	-0.0007803	-2.248	-0.0013248	-3.572	-0.0021051	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.638	1	9662	9662		40.058	2.2467	1	17904000			61386	3306	40989	41006	69487	69487					0.09415427371436635
VILAQSIRSHK	11	Unmodified	_VILAQSIRSHK_					0	0	0			REV__ENST00000481407.5_1_7:92191598-92207100:-|nuORF	REV__ENST00000481407.5_1_7:92191598-92207100:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3794555664062	2	626.380229	1250.7459	2.9096	0.0018225	-3.8515	-0.0024125	-0.94186	-0.00058996	626.377711482176	105.86	2.6957	105.82	104.89	107.59	-0.03714					304	63	6	0	0	0	0.58516	1	11830	11830		29.17	0	1	48616000	+		61387	27438	40990	41007	69488	69488					0.1305614547973164
VILARDVFV	9	Unmodified	_VILARDVFV_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3145751953125	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.7724	-0.0014314	-4.3342	-0.0022378	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.77546	1	10416	10416		31.955	6.5047	1	66055000	+		61388	18222	40991	41008	69489	69489					0.10343210236646883
VILARDVFV	9	Unmodified	_VILARDVFV_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3137817382812	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.77546	1	12155	12155		31.955	1.6371	1	4038100	+		61389	18222	40991	41008	69490	69490					0.10343210236646883
VILDVPHLL	9	Unmodified	_VILDVPHLL_					0	0	0			REV__ENST00000406170.1_1_6:111751926-111752229:+|nuORF	REV__ENST00000406170.1_1_6:111751926-111752229:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.80352783203125	2	509.81841	1017.62227	-0.3774	-0.00019241	2.7567	0.0014054	2.3793	0.001213	509.81987174057235	87.557	1.1404	87.758	87.285	88.425	0.20114					37	26	2	0	0	0	0.20789	1	8638	8638		19.36	4.6959	1	52538	+		61390	26302	40992	41009	69491	69491					0.11416094379421793
VILEILIFC	9	Unmodified	_VILEILIFC_					0	0	0		nc|ENSG00000104361|Q9H841-1|NIPAL2;ENSG00000104361|ENST00000430223|NIPAL2	nc|ENSG00000104361|Q9H841-1|NIPAL2	nc|ENSG00000104361|Q9H841-1|NIPAL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	531.8170166015625	2	531.817021	1061.61949	0.70533	0.00037511	-1.0774	-0.00057299	-0.37209	-0.00019788	531.8163470506786	86.513	2.7734	86.662	84.908	87.681	0.14901					179	64	3	0	0	0	0.7932	1	8565	8565		26.796	1.3459	1	1163300			61391	2127	40993	41010	69492	69492					0.09114502930265189
VILEKPKPAER	11	Unmodified	_VILEKPKPAER_					0	0	0		nc|ENSG00000188107|Q5T1H1|EYS	nc|ENSG00000188107|Q5T1H1|EYS	nc|ENSG00000188107|Q5T1H1|EYS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3922119140625	2	640.390262	1278.76597	0.064657	4.1406E-05	3.9219	0.0025115	3.9865	0.0025529	640.3927299544963	53.652	0.88778	53.59	53.086	53.973	-0.062065					49	22	3	0	0	0	0.75164	1	4374	4374		21.686	0.73882	1	245330			61392	15168	40994	41011	69493	69493					0.13773896419684206
VILFASSVLTT	11	Unmodified	_VILFASSVLTT_					0	0	0			REV__ENSG00000131748|ENST00000336308|STARD3	REV__ENSG00000131748|ENST00000336308|STARD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8425903320312	2	575.839539	1149.66453	1.6833	0.00096931	4.3447	0.0025019	6.028	0.0034712	575.8419126202111	90.702	2.7581	90.632	88.716	91.474	-0.069977					216	65	4	0	0	0	0.72918	2	9462	9462;9498		26.693	1.2427	1	1939000	+		61393	18962	40995	41012	69494;69495	69494					0.09568024997133762
VILGFRKAS	9	Unmodified	_VILGFRKAS_					0	0	0			REV__ENST00000481622.1_1_3:23848730-23850221:+|nuORF	REV__ENST00000481622.1_1_3:23848730-23850221:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.8056335449219	2	495.808377	989.6022	-0.57039	-0.0002828	-3.7409	-0.0018548	-4.3113	-0.0021376	495.8065300685273	90.913	2.2012	90.959	90.595	92.796	0.046448					94	52	3	0	0	0	0.74721	1	9464	9464		37.159	0	1	659920	+		61394	27446	40996	41013	69496	69496					0.10698343439457858
VILGKELT	8	Unmodified	_VILGKELT_					0	0	0			REV__ENSG00000183826|ENST00000481247|BTBD9	REV__ENSG00000183826|ENST00000481247|BTBD9	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7735900878906	2	436.776211	871.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.269	1	27.269	26.769	27.769	0								0	0	0	0.29199	1	1082	1082		29.842	3.0454	1		+		61395	22631	40997	41014	69497	69497					0.0969614356264401
VILGVTIRR	9	Unmodified	_VILGVTIRR_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8406372070312	2	513.842751	1025.67095	0.92898	0.00047735	-0.96955	-0.00049819	-0.040569	-2.0846E-05	513.842134150575	21.206	0.44043	21.274	21.065	21.506	0.068251					29	15	3	0	0	0	0.7932	1	558	558		21.96	3.6355	1	57532	+		61396	18431	40998	41015	69498	69498					0.15914007739161207
VILHFQLR	8	Unmodified	_VILHFQLR_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|125|3|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|125|3|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|125|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8129272460938	2	513.316369	1024.61818	0.23219	0.00011919	-4.3764	-0.0022465	-4.1442	-0.0021273	513.3138994871584	31.308	0.58674	31.326	31	31.587	0.018362					22	13	3	0	0	0	0.88915	1	1672	1672		35.201	6.9464	1	24017			61397	14658	40999	41016	69499	69499					0.10686049676360199
VILHFQLR	8	Unmodified	_VILHFQLR_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|125|3|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|125|3|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|125|3|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	513.316369	1024.61818	0.0058036	2.9791E-06	-3.9967	-0.0020516	-3.9909	-0.0020486	513.3142358927907	31.461	0.71838	31.41	31.012	31.731	-0.051033	0.060852	0.0002689	NaN	35.201	19	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20534			61398	14658	40999	41016							0.10686049676360199
VILHFQLR	8	Unmodified	_VILHFQLR_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|125|3|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|125|3|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|125|3|sense	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	513.316369	1024.61818	-0.057998	-2.9772E-05	-4.458	-0.0022884	-4.516	-0.0023181	513.3139977949314	31.322	0.67424	31.311	30.842	31.516	-0.010656	-0.037782	-0.00020469	NaN	35.201	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23181			61399	14658	40999	41016							0.10686049676360199
VILIEIIYSD	10	Unmodified	_VILIEIIYSD_					0	0	0			REV__ENSG00000176281|ENST00000315915|OR4K5	REV__ENSG00000176281|ENST00000315915|OR4K5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	589.3428344726562	2	589.339372	1176.66419	2.472	0.0014569	3.4621	0.0020404	5.9341	0.0034972	589.3412664221801	94.35	7.6193	94.29	93.29	100.91	-0.059212					508	178	4	0	0	0	0.86763	1	10339	10339		26.693	1.1189	1	16740000	+		61400	22119	41000	41017	69500	69500					0.08292605277279108
VILIRPVVRE	10	Unmodified	_VILIRPVVRE_					0	0	0			REV__ENST00000605778.1_1_7:35737925-35738120:+|nuORF	REV__ENST00000605778.1_1_7:35737925-35738120:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8560180664062	2	597.390065	1192.76558	0.84133	0.0005026	-2.0932	-0.0012505	-1.2519	-0.00074786	597.3895494319368	94.516	0.41582	94.679	94.575	94.99	0.16307					10	9	2	0	0	0	0.37624	1	9680	9680		10.265	0	1	78855	+		61401	29363	41001	41018	69501	69501					0.17690521490499123
VILIVDKVLET	11	Unmodified	_VILIVDKVLET_					0	0	0		ENSG00000138028|ENST00000402394|CGREF1;nc|ENSG00000138028|Q99674-3|CGREF1	ENSG00000138028|ENST00000402394|CGREF1	ENSG00000138028|ENST00000402394|CGREF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3933715820312	2	621.389396	1240.76424	0.92131	0.00057249	4.2568	0.0026451	5.1781	0.0032176	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.7342	1	11204	11204		25.574	0	1	22352000			61402	4255	41002	41019	69502	69502					0.1534884261109255
VILKIEKEEWK	11	Unmodified	_VILKIEKEEWK_					0	0	0		ENSG00000122477|ENST00000370137|LRRC39;nc|ENSG00000122477|Q96DD0-2|LRRC39	ENSG00000122477|ENST00000370137|LRRC39	ENSG00000122477|ENST00000370137|LRRC39	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2875061035156	3	472.28166	1413.82315	2.6006	0.0012282	-0.64612	-0.00030515	1.9545	0.00092308	472.28063563377833	100.59	1.5035	100.54	99.694	101.2	-0.052116					71	34	3	0	0	0	0.17784	1	10830	10830		8.4073	0	1	172850			61403	3226	41003	41020	69503	69503					0.13279318905415494
VILKKKKK	8	Unmodified	_VILKKKKK_					0	0	0		nc|ENSG00000198929|O75052-3|NOS1AP;ENSG00000198929|ENST00000361897|NOS1AP	nc|ENSG00000198929|O75052-3|NOS1AP	nc|ENSG00000198929|O75052-3|NOS1AP	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	492.9583435058594	2	492.868237	983.721922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.869	1	71.999	71.499	72.499	0.1301								0	0	0	0.30252	1	6569	6569		19.36	0	1				61404	8372	41004	41021	69504	69504					0.22940956784032096
VILKPTDVGVL	11	Unmodified	_VILKPTDVGVL_					0	0	0			REV__ENSG00000080493|ENST00000264485|SLC4A4	REV__ENSG00000080493|ENST00000264485|SLC4A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.3660888671875	2	577.363182	1152.71181	3.0575	0.0017653	2.5466	0.0014703	5.6041	0.0032356	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.70737	3	11152	11152;11176;11212		30.318	7.7381	1	11111000	+		61405	16801	41005	41022	69505;69506;69507	69505					0.141563042681355
VILKPTDVGVL	11	Unmodified	_VILKPTDVGVL_					0	0	0			REV__ENSG00000080493|ENST00000264485|SLC4A4	REV__ENSG00000080493|ENST00000264485|SLC4A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.36669921875	2	577.363182	1152.71181	2.1383	0.0012346	4.0903	0.0023616	6.2285	0.0035961	577.3654203694961	102.01	1.0705	102.33	101.93	103.01	0.32511					73	24	4	0	0	0	0.66929	1	12438	12438		36.447	8.3653	1	1980600	+		61406	16801	41005	41022	69508	69508					0.141563042681355
VILLFSIFY	9	Unmodified	_VILLFSIFY_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H;REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I;REV__ENSG00000006283|ENST00000359106|CACNA1G	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	557.8291015625	2	557.830986	1113.64742	-1.4267	-0.00079583	1.2001	0.00066946	-0.22654	-0.00012637	557.8315827372627	100.97	1.6229	101.12	100.62	102.24	0.15505					78	39	3	0	0	0	0.7932	1	10520	10520		25.45	6.3466	1	900390	+		61407	23145;17176;16099	41006	41023	69509	69509					0.09514149181973153
VILLIVILKGI	11	Unmodified	_VILLIVILKGI_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;nc|ENSG00000164199|Q8WXG9-2|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.6558227539062	2	597.43341	1192.85227	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.762	1	70.892	70.392	71.392	0.12965								0	0	0	0.56276	1	6438	6438		14.865	3.9993	1				61408	5938	41007	41024	69510	69510					0.26355507992366256
VILLPLTAS	9	Unmodified	_VILLPLTAS_					0	0	0			REV__nc|ENSG00000072041|Q9H2J7-3|SLC6A15	REV__nc|ENSG00000072041|Q9H2J7-3|SLC6A15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.8010559082031	2	463.799686	925.584819	-0.60437	-0.00028031	3.0781	0.0014276	2.4738	0.0011473	463.80087428998183	45.656	1.7884	45.651	45.143	46.932	-0.0041618					68	42	3	0	0	0	0.7932	1	3664	3664		25.45	7.1258	1	251610	+		61409	16634	41008	41025	69511	69511					0.119050031137931
VILLPLTAS	9	Unmodified	_VILLPLTAS_					0	0	0			REV__nc|ENSG00000072041|Q9H2J7-3|SLC6A15	REV__nc|ENSG00000072041|Q9H2J7-3|SLC6A15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.7996520996094	2	463.799686	925.584819	-1.1413	-0.00052933	2.885	0.001338	1.7437	0.00080871	463.8009223906452	41.714	1.3576	41.718	41.166	42.524	0.0043983					77	36	3	0	0	0	0.7932	1	2741	2741		18.324	1.8513	1	388800	+		61410	16634	41008	41025	69512	69512					0.119050031137931
VILLVAVPLA	10	Unmodified	_VILLVAVPLA_					0	0	0			REV__ENSG00000140443|ENST00000650285|IGF1R	REV__ENSG00000140443|ENST00000650285|IGF1R	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	505.2708740234375	2	504.346803	1006.67905	-1.5159	-0.00076456	3.7524	0.0018925	2.2364	0.0011279	504.3484423415186	46.83	0.21813	46.83	46.658	46.876	0					6	4	2	0	0	0	0.37624	1	3529	3529		26.796	7.4361	1	25346	+		61411	19615	41009	41026	69513	69513					0.17598141935923195
VILPRKRLG	9	Unmodified	_VILPRKRLG_					0	0	0			REV__nc|nan|Q9BVC5-2|C2orf49	REV__nc|nan|Q9BVC5-2|C2orf49	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3611450195312	2	526.358568	1050.70258	0.76968	0.00040513	3.9857	0.0020979	4.7554	0.002503	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.7932	1	2403	2403		19.36	1.995	1	7968500	+		61412	19277	41010	41027	69514	69514					0.1792600049311659
VILREVEM	8	Unmodified	_VILREVEM_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.78009033203125	2	494.778428	987.542302	1.0619	0.0005254	2.8604	0.0014153	3.9223	0.0019407	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.87479	1	8850	8850		30.504	2.6214	1	657500	+		61413	20542	41011	41028	69515	69515					0.0480328471392113
VILRYGTPGT	10	Unmodified	_VILRYGTPGT_					0	0	0		ENST00000554295.1_1_12:98850353-98850914:-|nuORF	ENST00000554295.1_1_12:98850353-98850914:-|nuORF	ENST00000554295.1_1_12:98850353-98850914:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.8067016601562	2	538.808574	1075.60259	-1.4886	-0.00080208	-1.9733	-0.0010633	-3.462	-0.0018653	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.77314	1	9096	9096		40.778	10.46	1	783690			61414	13718	41012	41029	69516	69516					0.06781718368665679
VILSWMLL	8	Unmodified	_VILSWMLL_					0	0	0			REV__nc|ENSG00000133460|Q9BYW1|SLC2A11;REV__nc|ENSG00000133460|Q9BYW1-2|SLC2A11	REV__nc|ENSG00000133460|Q9BYW1|SLC2A11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7908935546875	2	487.790807	973.56706	-1.4525	-0.00070854	0.77341	0.00037726	-0.67914	-0.00033128	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.87276	1	7927	7927		29.842	1.5873	1	503530	+		61415	19080;26288	41013	41030	69517	69517					0.07921964587308139
VILTEKDL	8	Unmodified	_VILTEKDL_					0	0	0		ENST00000489394.5_1_X:23801366-23802421:+|nuORF;ENSG00000130066|ENST00000379270|SAT1	ENST00000489394.5_1_X:23801366-23802421:+|nuORF	ENST00000489394.5_1_X:23801366-23802421:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77752685546875	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.109	1	80.109	79.609	80.609	0								0	0	0	0.30316	1	7385	7385		42.474	1.9018	1				61416	3621	41014	41031	69518	69518					0.07575822354453976
VILTILDDS	9	Unmodified	_VILTILDDS_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1;ENST00000509621.1_3_5:89989878-90055411:+|nuORF	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.78009033203125	2	494.78169	987.548827	-0.60063	-0.00029718	-2.0549	-0.0010167	-2.6556	-0.0013139	494.78058003536165	86.254	4.0089	86.448	84.851	88.86	0.19379					239	94	4	0	0	0	0.62081	1	8450	8450		45.952	6.9305	1	707910			61417	5938	41015	41032	69519	69519					0.0545550114627531
VILTLAVSP	9	Unmodified	_VILTLAVSP_					0	0	0		ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.79217529296875	2	456.791861	911.569169	-1.2294	-0.00056156	2.5606	0.0011697	1.3313	0.00060812	456.79289004576646	40.059	1.2176	40.068	39.557	40.774	0.0092773					97	29	4	0	0	0	0.78058	1	2843	2843		30.504	0	1	1129600			61418	12882	41016	41033	69520	69520					0.10984716596749422
VILTLAVSP	9	Unmodified	_VILTLAVSP_					0	0	0		ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7926330566406	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.278	1	38.22	37.72	38.72	-0.057915								0	0	0	0.30416	1	2253	2253		29.15	4.9468	1				61419	12882	41016	41033	69521	69521					0.10984716596749422
VILTLAVSP	9	Unmodified	_VILTLAVSP_					0	0	0		ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	ENST00000503506.6_2_12:104680697-104680886:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7931213378906	2	456.791861	911.569169	0.90302	0.00041249	1.9801	0.00090447	2.8831	0.001317	456.792654311578	37.107	0.83018	37.593	36.916	37.747	0.48581					79	19	5	0	0	0	0.7932	1	2984	2984		24.203	3.7209	1	4180400			61420	12882	41016	41033	69522	69522					0.10984716596749422
VILVLGIPAL	10	Unmodified	_VILVLGIPAL_					0	0	0			REV__ENSG00000128602|ENST00000249373|SMO	REV__ENSG00000128602|ENST00000249373|SMO	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3460388183594	2	504.346803	1006.67905	-0.55637	-0.0002806	-2.161	-0.0010899	-2.7173	-0.0013705	504.3456043335187	55.953	3.0421	56.354	55.824	58.866	0.40101					146	75	2	0	0	0	0.85108	1	5806	5806		19.36	0	1	1905800	+		61421	18783	41017	41034	69523	69523					0.17598141935934564
VILVVTLVVP	10	Unmodified	_VILVVTLVVP_					0	0	0		ENSG00000104689|ENST00000221132|TNFRSF10A	ENSG00000104689|ENST00000221132|TNFRSF10A	ENSG00000104689|ENST00000221132|TNFRSF10A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.35986328125	2	526.359911	1050.70527	-0.016718	-8.7995E-06	2.2479	0.0011832	2.2312	0.0011744	526.3609420824897	35.324	1.4285	35.312	34.729	36.157	-0.012199					134	33	5	0	0	0	0.8488	1	2110	2110		17.365	5.1581	1	5338900			61422	2141	41018	41035	69524	69524					0.18194411107424457
VILVVTLVVP	10	Unmodified	_VILVVTLVVP_					0	0	0		ENSG00000104689|ENST00000221132|TNFRSF10A	ENSG00000104689|ENST00000221132|TNFRSF10A	ENSG00000104689|ENST00000221132|TNFRSF10A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.361083984375	2	526.359911	1050.70527	0.22046	0.00011604	2.2181	0.0011675	2.4386	0.0012836	526.3609252843382	33.187	1.6469	33.296	32.993	34.64	0.10991					241	72	5	0	0	0	0.85438	1	1668	1668		16.473	4.2663	1	5657400			61423	2141	41018	41035	69525	69525					0.18194411107424457
VILYSSTG	8	Unmodified	_VILYSSTG_					0	0	0			REV__ENSG00000214029|ENST00000537226|ZNF891	REV__ENSG00000214029|ENST00000537226|ZNF891	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.22674560546875	2	420.229094	838.443634	-0.26172	-0.00010998	-2.7119	-0.0011396	-2.9737	-0.0012496	420.2278427718772	76.28	2.2676	76.231	74.595	76.863	-0.048271					136	69	3	0	0	0	0.9159	1	7492	7492		44.531	9.3304	1	253020	+		61424	23645	41019	41036	69526	69526					0.017950047405292935
VILYTGPELC	10	Unmodified	_VILYTGPELC_					0	0	0			REV__nc|ENSG00000214711|A8MX76-2|CAPN14	REV__nc|ENSG00000214711|A8MX76-2|CAPN14	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.2880249023438	2	554.291368	1106.56818	-1.378	-0.00076384	-4.1577	-0.0023046	-5.5357	-0.0030684	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.86452	1	2358	2358		30.504	3.8107	1	328550	+		61425	23661	41020	41037	69527	69527					0.019161341655490105
VIMLEVKQKQK	11	Unmodified	_VIMLEVKQKQK_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.609619140625	3	448.607491	1342.80064	0.5352	0.00024009	3.6987	0.0016593	4.2339	0.0018994	448.6089733377508	76.693	0.99095	76.828	76.468	77.459	0.13478					122	48	3	0	0	0	0.78083	1	7196	7196		15.337	0.64381	1	670390			61426	720	41021	41038	69528	69528					0.14295396236116176
VINGGFGLVLD	11	Unmodified	_VINGGFGLVLD_					0	0	0		ENSG00000159650|ENST00000290868|UROC1;nc|ENSG00000159650|Q96N76-2|UROC1	ENSG00000159650|ENST00000290868|UROC1	ENSG00000159650|ENST00000290868|UROC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3059692382812	2	552.308406	1102.60226	0.26261	0.00014504	-3.8233	-0.0021116	-3.5607	-0.0019666	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.66929	1	9396	9396		36.447	1.2947	1	1950800			61427	5542	41022	41039	69529	69529					0.05506298648788288
VINGMKSIL	9	Unmodified	_VINGMKSIL_					0	0	0			REV__ENST00000457952.5_1_2:70417551-70417746:-|nuORF	REV__ENST00000457952.5_1_2:70417551-70417746:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	487.79071044921875	2	487.788795	973.563038	0.6235	0.00030414	2.5998	0.0012681	3.2233	0.0015723	487.7902137259097	82.17	2.6982	82.315	80.695	83.393	0.14551					159	62	3	0	0	0	0.64922	1	7738	7738		44.117	6.9577	1	479320	+		61428	26976	41023	41040	69530	69530					0.0751987509358969
VINHLEKLFVT	11	Unmodified	_VINHLEKLFVT_					0	0	0		nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF	nc|ENSG00000156261|P50990-2|CCT8	nc|ENSG00000156261|P50990-2|CCT8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.25811767578125	3	438.258967	1311.75507	-1.5943	-0.00069873	-1.2956	-0.0005678	-2.8899	-0.0012665	438.2583289789849	29.969	0.70984	30.036	29.73	30.44	0.066727					92	32	4	0	0	0	0.68431	1	1291	1291		34.087	8.0231	1	499410			61429	5372	41024	41041	69531	69531					0.11166494045392028
VINKMQRRL	9	Unmodified	_VINKMQRRL_					0	0	0			REV__nc|ENSG00000063245|Q9Y6I3-3|EPN1	REV__nc|ENSG00000063245|Q9Y6I3-3|EPN1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.3538208007812	2	579.350417	1156.68628	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.27	1	108.23	107.73	108.73	-0.042404								0	0	0	0.31472	1	11800	11800		25.45	0	1		+		61430	16470	41025	41042	69532	69532					0.11420551264723144
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3430786132812	2	589.344989	1176.67542	-0.40075	-0.00023618	-3.0716	-0.0018102	-3.4723	-0.0020464	589.3430360052416	92.617	3.0164	92.617	90.649	93.665	0					241	70	4	0	0	0	0.69995	4	9121	9073;9097;9121;9158		31.53	3.4483	1	4112500			61431	13602	41026	41043	69533;69534;69535;69536	69535					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3433837890625	2	589.344989	1176.67542	-0.36759	-0.00021664	-3.0824	-0.0018166	-3.45	-0.0020332	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.64498	4	9346	9277;9288;9312;9346		39.253	8.9351	1	11103000			61432	13602	41026	41043	69537;69538;69539;69540	69540					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3427734375	2	589.344989	1176.67542	-0.67475	-0.00039766	-3.0874	-0.0018195	-3.7621	-0.0022172	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.66929	8	9425	9390;9413;9425;9485;9555;9629;9641;9678		36.447	7.2752	1	5429300			61433	13602	41026	41043	69541;69542;69543;69544;69545;69546;69547;69548	69543					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3426513671875	2	589.344989	1176.67542	-0.6745	-0.00039751	-2.9294	-0.0017264	-3.6039	-0.002124	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.70737	1	9737	9737		30.318	1.1477	1	16185000			61434	13602	41026	41043	69549	69549					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3425903320312	2	589.344989	1176.67542	-0.65315	-0.00038493	-3.1619	-0.0018634	-3.815	-0.0022484	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.65746	2	9542	9542;9588		37.812	6.129	1	5584100			61435	13602	41026	41043	69550;69551	69550					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3427734375	2	589.344989	1176.67542	-0.65438	-0.00038565	-2.8884	-0.0017022	-3.5427	-0.0020879	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.69995	3	9827	9827;9994;10176		31.53	3.4483	1	16804000			61436	13602	41026	41043	69552;69553;69554	69552					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3430786132812	2	589.344989	1176.67542	0.83312	0.00049099	-4.3931	-0.002589	-3.5599	-0.002098	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.60058	4	9898	9489;9547;9898;10006		44.377	4.319	1	20363000			61437	13602	41026	41043	69555;69556;69557;69558	69557					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.342529296875	2	589.344989	1176.67542	-1.324	-0.00078029	-2.4688	-0.001455	-3.7928	-0.0022353	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.66929	5	9303	9195;9255;9291;9303;9339		36.447	10.383	1	5946500			61438	13602	41026	41043	69559;69560;69561;69562;69563	69562					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3428344726562	2	589.344989	1176.67542	-1.324	-0.0007803	-2.248	-0.0013248	-3.572	-0.0021051	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.65746	4	9495	9459;9495;9650;9723		37.812	6.2817	1	17904000			61439	13602	41026	41043	69564;69565;69566;69567	69565					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3431396484375	2	589.344989	1176.67542	0.66189	0.00039008	-4.0037	-0.0023596	-3.3418	-0.0019695	589.3425006699924	91.235	1.3572	91.685	90.611	91.968	0.44958					101	32	4	0	0	0	0.72106	1	10826	10826		28.081	3.8497	1	1778100			61440	13602	41026	41043	69568	69568					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.343505859375	2	589.344989	1176.67542	0.71715	0.00042265	-3.7579	-0.0022147	-3.0408	-0.0017921	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.638	1	10885	10885		40.058	9.5545	1	2439600			61441	13602	41026	41043	69569	69569					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3427124023438	2	589.344989	1176.67542	0.82336	0.00048524	-4.2828	-0.002524	-3.4594	-0.0020388	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.65746	2	11182	11135;11182		37.812	7.4938	1	9460500			61442	13602	41026	41043	69570;69571	69571					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3433227539062	2	589.344989	1176.67542	-0.63667	-0.00037522	-2.3968	-0.0014126	-3.0335	-0.0017878	589.3434114524977	92.054	1.6025	92.516	91.977	93.579	0.46249					141	37	4	0	0	0	0.70737	1	10983	10983		30.318	1.1477	1	2236100			61443	13602	41026	41043	69572	69572					0.09415427371436635
VINLLITSFAS	11	Unmodified	_VINLLITSFAS_					0	0	0		ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENST00000547250.5_1_12:57033951-57037708:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3427734375	2	589.344989	1176.67542	0.15553	9.1664E-05	-3.5398	-0.0020862	-3.3842	-0.0019945	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.69995	2	11346	11334;11346		31.53	4.7437	1	10540000			61444	13602	41026	41043	69573;69574	69574					0.09415427371436635
VINLLIVLLIL	11	Unmodified	_VINLLIVLLIL_					0	0	0			REV__nc|ENSG00000180745|Q8NCR9-2|CLRN3	REV__nc|ENSG00000180745|Q8NCR9-2|CLRN3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	618.7099609375	2	618.438692	1234.86283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.089	1	61.643	61.143	62.143	0.55386								0	0	0	0.56276	1	6523	6523		14.865	3.9993	1		+		61445	22413	41027	41044	69575	69575					0.2547949064680779
VINLYRLDYL	10	Unmodified	_VINLYRLDYL_					0	0	0			REV__ENSG00000166685|ENST00000299886|COG1	REV__ENSG00000166685|ENST00000299886|COG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.3841552734375	2	641.363713	1280.71287	4.3563	0.0027939	-0.77617	-0.00049781	3.5801	0.0022961	641.3632666607327	102.66	0.22026	102.96	102.81	103.03	0.29865					11	5	3	0	0	0	0.37624	1	12497	12497		10.265	0	1	733810	+		61446	21310	41028	41045	69576	69576					0.08374518637060646
VINNKLEQRII	11	Unmodified	_VINNKLEQRII_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.2733459472656	3	447.273388	1338.79833	2.7469	0.0012286	-3.7209	-0.0016643	-0.97397	-0.00043563	447.2716698756326	112.87	7.9016	112.84	112.07	119.97	-0.024811					554	280	2	0	0	0	0.73647	1	12418	12418		25.068	7.2346	1	1747200			61447	1181	41029	41046	69577	69577					0.14248683822711428
VINNKLEQRII	11	Unmodified	_VINNKLEQRII_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	447.273388	1338.79833	-1.7853	-0.00079853	1.1334	0.00050693	-0.65194	-0.00029159	447.273759781694	113.23	0.11548	113.19	113.11	113.22	-0.032326	0.17593	0.006265	NaN	25.068	6	2	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1276400			61448	1181	41029	41046							0.14248683822711428
VINQFKLD	8	Unmodified	_VINQFKLD_					0	0	0			REV__ENSG00000071205|ENST00000336498|ARHGAP10	REV__ENSG00000071205|ENST00000336498|ARHGAP10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7901611328125	2	488.776742	975.538931	0.35321	0.00017264	0.70248	0.00034336	1.0557	0.000516	488.77668930449875	80.457	1.0349	80.397	80.23	81.265	-0.059692					37	26	2	0	0	0	0.4196	1	8193	8193		18.324	0	1	128130	+		61449	16623	41030	41047	69578	69578					0.05018357931567152
VINRRPWLP	9	Unmodified	_VINRRPWLP_					0	0	0		nc|ENSG00000058668|P23634-5|ATP2B4;nc|ENSG00000058668|P23634-4|ATP2B4;nc|ENSG00000058668|P23634-3|ATP2B4;nc|ENSG00000058668|P23634-2|ATP2B4;nc|ENSG00000058668|P23634-7|ATP2B4;ENSG00000058668|ENST00000357681|ATP2B4;nc|ENSG00000058668|P23634-8|ATP2B4;nc|ENSG00000058668|P23634|ATP2B4	nc|ENSG00000058668|P23634-5|ATP2B4	nc|ENSG00000058668|P23634-5|ATP2B4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8425903320312	2	575.845825	1149.6771	-1.368	-0.00078773	-3.7183	-0.0021412	-5.0862	-0.0029289	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.78058	1	9168	9168		30.504	3.4563	1	6121300			61450	1045	41031	41048	69579	69579					0.1082452597070187
VINVAIRMF	9	Unmodified	_VINVAIRMF_					0	0	0		ENST00000481451.1_1_10:124172402-124177583:+|nuORF	ENST00000481451.1_1_10:124172402-124177583:+|nuORF	ENST00000481451.1_1_10:124172402-124177583:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.8204345703125	2	531.810062	1061.60557	1.1641	0.0006191	0.1904	0.00010126	1.3545	0.00072036	532.3105492063777	82.921	0.25473	82.855	82.632	82.887	-0.066185					7	5	2	0	0	0	0.20789	1	8398	8398		31.955	1.4512	1	65251			61451	12460	41032	41049	69580	69580					0.07723270221799794
VINVSMHPG	9	Unmodified	_VINVSMHPG_					0	0	0			REV__ENSG00000112624|ENST00000314073|BICRAL	REV__ENSG00000112624|ENST00000314073|BICRAL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.24444580078125	2	477.247295	952.480036	0.42784	0.00020419	-2.0067	-0.00095767	-1.5788	-0.00075348	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.72402	1	7263	7263		38.806	3.1879	1	2278400	+		61452	17956	41033	41050	69581	69581					0.0018955836559371164
VIPDPRPY	8	Unmodified	_VIPDPRPY_					0	0	0			REV__ENST00000336498.7_1_4:148968187-148984334:+|nuORF	REV__ENST00000336498.7_1_4:148968187-148984334:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.763671875	2	478.763635	955.512717	0.65055	0.00031146	-0.94581	-0.00045282	-0.29526	-0.00014136	478.7629847554191	51.393	0.88005	51.828	51.492	52.372	0.43505					47	20	4	0	0	0	0.92457	1	5101	5101		47.916	1.9636	1	1431000	+		61453	25193	41034	41051	69582	69582					0.03318088760090632
VIPGIVGAV	9	Unmodified	_VIPGIVGAV_					0	0	0		nc|ENSG00000292348|P14209-2|CD99;nc|ENSG00000292348|P14209-3|CD99;ENSG00000002586|ENST00000381192|CD99	nc|ENSG00000292348|P14209-2|CD99	nc|ENSG00000292348|P14209-2|CD99	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2674560546875	2	412.765646	823.516739	-0.098129	-4.0504E-05	0.66428	0.00027419	0.56615	0.00023369	412.7671463759069	51.656	3.1479	51.654	50.749	53.897	-0.0020447					128	83	2	0	0	0	0.7932	1	4432	4432		21.702	0	1	180920			61454	653	41035	41052	69583	69583					0.0979217825380374
VIPHIIRSAYD	11	Unmodified	_VIPHIIRSAYD_					0	0	0			REV__ENSG00000198793|ENST00000361445|MTOR	REV__ENSG00000198793|ENST00000361445|MTOR	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.882568359375	2	642.358962	1282.70337	-0.032635	-2.0964E-05	0.46326	0.00029758	0.43062	0.00027661	642.3587522676	99.184	0.58127	99.184	98.931	99.513	0					23	13	2	0	0	0	0.17457	1	9982	9982		42.864	16.171	1	160730	+		61455	23382	41036	41053	69584	69584					0.0733275035152019
VIPHIIRSAYD	11	Unmodified	_VIPHIIRSAYD_					0	0	0			REV__ENSG00000198793|ENST00000361445|MTOR	REV__ENSG00000198793|ENST00000361445|MTOR	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	642.358962	1282.70337	1.5331	0.0009848	-3.6642	-0.0023537	-2.1311	-0.0013689	642.3560829725251	98.878	0.39307	99.24	98.976	99.369	0.36136	-0.0061772	-0.0038439	NaN	42.864	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	152630	+		61456	23382	41036	41053							0.0733275035152019
VIPHIIRSAYD	11	Unmodified	_VIPHIIRSAYD_					0	0	0			REV__ENSG00000198793|ENST00000361445|MTOR	REV__ENSG00000198793|ENST00000361445|MTOR	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	642.358962	1282.70337	3.0823	0.00198	-2.1821	-0.0014017	0.90025	0.00057828	642.3571873518557	98.951	0.50819	99.314	99.015	99.523	0.36292	0.068038	-0.0019398	NaN	42.864	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	229540	+		61457	23382	41036	41053							0.0733275035152019
VIPHVPVKH	9	Unmodified	_VIPHVPVKH_					0	0	0			REV__ENSG00000071242|ENST00000265678|RPS6KA2	REV__ENSG00000071242|ENST00000265678|RPS6KA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.3187255859375	2	513.316369	1024.61818	-0.38756	-0.00019894	1.1387	0.00058453	0.75117	0.00038559	513.3170376628356	53.655	1.47	53.703	53.107	54.577	0.047802					76	53	2	0	0	0	0.7932	1	4414	4414		25.45	1.2474	1	209860	+		61458	16624	41037	41054	69585	69585					0.10686049676360199
VIPPTPKTT	9	Unmodified	_VIPPTPKTT_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7285461425781	2	477.286943	952.559333	0.30132	0.00014382	-2.3539	-0.0011235	-2.0526	-0.00097969	477.28375792291047	97.85	0.16368	98.227	98.123	98.287	0.37679					5	3	2	0	0	0	0.20789	1	11802	11802		40.778	6.6056	1	35966			61459	2871	41038	41055	69586	69586					0.08115528591372367
VIPRITIEMK	10	Unmodified	_VIPRITIEMK_					0	0	0		ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A	ENSG00000131747|ENST00000423485|TOP2A	ENSG00000131747|ENST00000423485|TOP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5805358886719	3	400.577531	1198.71076	3.1807	0.0012741	4.3168	0.0017292	7.4975	0.0030033	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.86621	1	12550	12550		26.063	2.6855	1	88404			61460	3745	41039	41056	69587	69587					0.11935766627561861
VIPTIHVLDL	10	Unmodified	_VIPTIHVLDL_					0	0	0		ENSG00000140057|ENST00000267584|AK7	ENSG00000140057|ENST00000267584|AK7	ENSG00000140057|ENST00000267584|AK7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3406982421875	2	560.342249	1118.66995	-1.4184	-0.00079481	-2.1655	-0.0012134	-3.584	-0.0020082	560.3409019697357	89.331	3.0544	89.504	87.698	90.752	0.17234					137	71	4	0	0	0	0.85934	1	8881	8881		35.618	0	1	613340			61461	4413	41040	41057	69588	69588					0.11535748579603933
VIPVGLYS	8	Unmodified	_VIPVGLYS_					0	0	0			REV__ENSG00000116266|ENST00000370008|STXBP3	REV__ENSG00000116266|ENST00000370008|STXBP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.25042724609375	2	424.249829	846.485105	-0.18354	-7.7867E-05	0.52567	0.00022301	0.34213	0.00014515	424.2501209493524	107.39	0.88235	107.36	106.9	107.79	-0.034401					76	20	5	0	0	0	0.90024	1	11693	11693		39.021	0	1	4879200	+		61462	18194	41041	41058	69589	69589					0.05572185499852367
VIPVGLYS	8	Unmodified	_VIPVGLYS_					0	0	0			REV__ENSG00000116266|ENST00000370008|STXBP3	REV__ENSG00000116266|ENST00000370008|STXBP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	424.2500305175781	2	424.249829	846.485105	-1.8671	-0.00079214	2.2977	0.00097481	0.43057	0.00018267	424.250891156039	107.16	1.149	107.19	106.72	107.87	0.036125					99	27	5	0	0	0	0.87276	1	11420	11420		29.842	0	1	9677200	+		61463	18194	41041	41058	69590	69590					0.05572185499852367
VIPVGLYS	8	Unmodified	_VIPVGLYS_					0	0	0			REV__ENSG00000116266|ENST00000370008|STXBP3	REV__ENSG00000116266|ENST00000370008|STXBP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2503662109375	2	424.249829	846.485105	2.211	0.00093801	-1.2738	-0.00054042	0.93718	0.0003976	424.249377193164	107.05	1.1854	107.15	106.72	107.9	0.10396					163	44	6	0	0	0	0.87276	1	13082	13082		29.842	0	1	22757000	+		61464	18194	41041	41058	69591	69591					0.05572185499852367
VIPVGLYS	8	Unmodified	_VIPVGLYS_					0	0	0			REV__ENSG00000116266|ENST00000370008|STXBP3	REV__ENSG00000116266|ENST00000370008|STXBP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.2506103515625	2	424.249829	846.485105	4.6708	0.0019816	-3.7108	-0.0015743	0.95999	0.00040727	424.2483274707268	107.02	1.3116	107.17	106.66	107.97	0.14929					169	50	5	0	0	0	0.90024	1	13106	13106		39.021	0	1	20368000	+		61465	18194	41041	41058	69592	69592					0.05572185499852367
VIQAFSAPE	9	Unmodified	_VIQAFSAPE_					0	0	0		ENSG00000111678|ENST00000229281|C12orf57	ENSG00000111678|ENST00000229281|C12orf57	ENSG00000111678|ENST00000229281|C12orf57	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.2507629394531	2	481.2531	960.491647	-0.40063	-0.0001928	-4.0774	-0.0019622	-4.478	-0.002155	481.25105064647624	29.235	0.56318	29.206	28.954	29.517	-0.029207					23	12	2	0	0	0	0.67345	1	1834	1834		42.396	3.59	1	226390			61466	2601	41042	41059	69593	69593					0.009820786605587273
VIQAFSAPE	9	Unmodified	_VIQAFSAPE_					0	0	0		ENSG00000111678|ENST00000229281|C12orf57	ENSG00000111678|ENST00000229281|C12orf57	ENSG00000111678|ENST00000229281|C12orf57	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	481.2531	960.491647	-0.050822	-2.4458E-05	-4.0521	-0.0019501	-4.1029	-0.0019746	481.2509410955237	29.372	0.64521	29.282	28.974	29.619	-0.089546	0.038241	1.117E-05	NaN	42.396	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	228450			61467	2601	41042	41059							0.009820786605587273
VIQRHKKWKS	10	Unmodified	_VIQRHKKWKS_					0	0	0			REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2660217285156	3	437.266568	1308.77787	-0.68964	-0.00030156	3.497	0.0015291	2.8073	0.0012275	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.86225	1	4912	4912		32.751	2.1817	1	2651700	+		61468	22827	41043	41060	69594	69594					0.13583557953529635
VIQRHKKWKS	10	Unmodified	_VIQRHKKWKS_					0	0	0			REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.267578125	3	437.266568	1308.77787	-1.5693	-0.00068621	4.378	0.0019144	2.8087	0.0012282	437.2683683670783	53.718	2.085	53.765	52.872	54.957	0.047806					225	71	5	0	0	0	0.85441	1	4452	4452		20.837	4.3073	1	2544700	+		61469	22827	41043	41060	69595	69595					0.13583557953529635
VIQRHKKWKS	10	Unmodified	_VIQRHKKWKS_					0	0	0			REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26776123046875	3	437.266568	1308.77787	0.29718	0.00012995	2.7258	0.0011919	3.023	0.0013219	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.85086	1	4124	4124		19.263	2.0959	1	4533800	+		61470	22827	41043	41060	69596	69596					0.13583557953529635
VIQRHKKWKS	10	Unmodified	_VIQRHKKWKS_					0	0	0			REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2676696777344	3	437.266568	1308.77787	0.31383	0.00013723	2.5449	0.0011128	2.8587	0.00125	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.85441	1	4430	4430		20.837	0	1	2521600	+		61471	22827	41043	41060	69597	69597					0.13583557953529635
VIQRHKKWKS	10	Unmodified	_VIQRHKKWKS_					0	0	0			REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.267822265625	3	437.266568	1308.77787	-0.53562	-0.00023421	3.585	0.0015676	3.0494	0.0013334	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.85285	1	4166	4166		16.717	0.79673	1	4132000	+		61472	22827	41043	41060	69598	69598					0.13583557953529635
VIQRHKKWKS	10	Unmodified	_VIQRHKKWKS_					0	0	0			REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26678466796875	3	437.266568	1308.77787	-0.59734	-0.0002612	3.3641	0.001471	2.7668	0.0012098	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.85441	1	4456	4456		20.837	1.5745	1	2564600	+		61473	22827	41043	41060	69599	69599					0.13583557953529635
VIQRHKKWKS	10	Unmodified	_VIQRHKKWKS_					0	0	0			REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2677001953125	3	437.266568	1308.77787	-0.13248	-5.7929E-05	2.8362	0.0012402	2.7038	0.0011823	437.26771661657114	51.155	1.5796	51.59	50.873	52.452	0.43505					109	37	4	0	0	0	0.86338	1	5108	5108		31.634	7.4025	1	2614800	+		61474	22827	41043	41060	69600	69600					0.13583557953529635
VIQRPRRRRKA	11	Unmodified	_VIQRPRRRRKA_					0	0	0		ENSG00000145416|ENST00000514618|MARCHF1	ENSG00000145416|ENST00000514618|MARCHF1	ENSG00000145416|ENST00000514618|MARCHF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.30804443359375	3	479.311282	1434.91202	-1.2686	-0.00060804	-3.1484	-0.0015091	-4.417	-0.0021171	479.3097502684534	47.94	0.94824	47.937	47.755	48.703	-0.002449					33	26	2	0	0	0	0.84494	1	4063	4063		6.3209	0	1	215950			61475	4770	41044	41061	69601	69601					0.21195636498941894
VIQVGKEKY	9	Unmodified	_VIQVGKEKY_					0	0	0		ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	ENSG00000156675|ENST00000330843|RAB11FIP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.3106079101562	2	532.310949	1062.60735	-0.09908	-5.2741E-05	0.25822	0.00013745	0.15914	8.4711E-05	532.3109829176856	71.645	0.60355	71.605	71.407	72.011	-0.039001					33	21	2	0	0	0	0.78983	1	6977	6977		27.882	0	1	171130			61476	5388	41045	41062	69602	69602					0.0785460251142922
VIRCLIHDKW	10	Unmodified	_VIRCLIHDKW_					0	0	0			REV__ENST00000553281.5_1_14:89088194-89171927:-|nuORF	REV__ENST00000553281.5_1_14:89088194-89171927:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3621826171875	2	641.858075	1281.7016	1.7061	0.001095	0.71524	0.00045908	2.4213	0.0015541	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.6116	1	12613	12613		49.442	6.5773	1	27133000	+		61477	21191	41046	41063	69603	69603					0.07201418061890763
VIRKLGWG	8	Unmodified	_VIRKLGWG_					0	0	0		nc|ENSG00000096063|Q96SB4-3|SRPK1;ENST00000513367.1_1_6:35855779-35888866:-|nuORF;nc|ENSG00000096063|Q96SB4-4|SRPK1;ENSG00000096063|ENST00000373825|SRPK1;ENST00000476117.1_1_7:104800923-104844162:-|nuORF;nc|ENSG00000135250|P78362|SRPK2;ENSG00000135250|ENST00000393651|SRPK2	nc|ENSG00000096063|Q96SB4-3|SRPK1;ENST00000476117.1_1_7:104800923-104844162:-|nuORF	nc|ENSG00000096063|Q96SB4-3|SRPK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7904968261719	2	464.789987	927.565421	-1.14	-0.00052988	2.7044	0.001257	1.5644	0.00072712	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.82464	1	1801	1801		21.702	1.2205	1	286820			61478	14804;3996	41047	41064	69604	69604					0.09874091613551172
VIRSKKKRRHP	11	Unmodified	_VIRSKKKRRHP_					0	0	0		ENST00000490671.1_1_15:99788499-99789692:-|nuORF	ENST00000490671.1_1_15:99788499-99789692:-|nuORF	ENST00000490671.1_1_15:99788499-99789692:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.30572509765625	3	468.972266	1403.89497	0.30554	0.00014329	-2.9091	-0.0013643	-2.6036	-0.001221	468.97072625730493	48.907	1.5884	48.945	48.371	49.959	0.037731					126	38	5	0	0	0	0.7896	1	3778	3778		13.508	6.1082	1	778810			61479	12672	41048	41065	69605	69605					0.20917715893165223
VISDEIPK	8	Unmodified	_VISDEIPK_					0	0	0		nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;ENSG00000070182|ENST00000644917|SPTB	nc|ENSG00000070182|P11277-3|SPTB	nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7537841796875	2	450.755475	899.496398	-1.5537	-0.00070033	-1.298	-0.00058508	-2.8517	-0.0012854	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.86677	1	7760	7760		27.882	3.6795	1	298090			61480	1234	41049	41066	69606	69606					0.042629628033296285
VISDHLQAAQ	10	Unmodified	_VISDHLQAAQ_					0	0	0		ENST00000377710.9_1_20:17950486-17950636:+|nuORF	ENST00000377710.9_1_20:17950486-17950636:+|nuORF	ENST00000377710.9_1_20:17950486-17950636:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.287353515625	2	541.285463	1080.55637	-0.40662	-0.0002201	0.20459	0.00011074	-0.20202	-0.00010935	541.2854856444462	21.769	1.1064	21.14	20.586	21.692	-0.62834					53	27	3	0	0	0	0.86763	1	808	808		26.693	1.2427	1	346250			61481	10844	41050	41067	69607	69607					0.01931653466544958
VISHQFQA	8	Unmodified	_VISHQFQA_					0	0	0		ENST00000488285.1_1_9:130486913-130493681:+|nuORF	ENST00000488285.1_1_9:130486913-130493681:+|nuORF	ENST00000488285.1_1_9:130486913-130493681:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.25628662109375	2	465.245609	928.476666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.647	1	72.647	72.147	73.147	0								0	0	0	0.30045	1	6521	6521		40.573	1.7665	1				61482	12621	41051	41068	69608	69608					0.009566315832330474
VISIEAASPR	10	Unmodified	_VISIEAASPR_					0	0	0		nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4;ENSG00000196159|ENST00000394329|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	nc|ENSG00000196159|Q6V0I7-3|FAT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.797607421875	2	521.798206	1041.58186	0.52673	0.00027485	-0.7232	-0.00037736	-0.19647	-0.00010252	521.7976346265104	32.615	0.47147	32.741	32.546	33.018	0.12643					25	10	3	0	0	0	0.3985	1	2290	2290		64.207	2.0999	1	462500			61483	8020	41052	41069	69609	69609					0.0627312798899311
VISKEILE	8	Unmodified	_VISKEILE_					0	0	0		nc|ENSG00000187715|Q3ZCT8-2|KBTBD12;ENSG00000187715|ENST00000405109|KBTBD12	nc|ENSG00000187715|Q3ZCT8-2|KBTBD12	nc|ENSG00000187715|Q3ZCT8-2|KBTBD12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.778076171875	2	465.778951	929.543348	-1.4399	-0.00067067	-1.5585	-0.00072594	-2.9984	-0.0013966	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.88601	1	7490	7490		34.173	2.2177	1	287800			61484	7874	41053	41070	69610	69610					0.07575822354465345
VISPSLIGP	9	Unmodified	_VISPSLIGP_					0	0	0			REV__nc|ENSG00000168918|Q92835-3|INPP5D	REV__nc|ENSG00000168918|Q92835-3|INPP5D	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.77374267578125	2	441.768386	881.522219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.196	1	64.316	63.816	64.816	0.12004								0	0	0	0.31088	1	5641	5641		26.796	1.3459	1		+		61485	21533	41054	41071	69611	69611					0.07671857045613706
VISSLHVTTS	10	Unmodified	_VISSLHVTTS_					0	0	0		ENST00000511074.1_1_5:177305805-177309842:+|nuORF;nc|ENSG00000051596|Q96J01-2|THOC3	ENST00000511074.1_1_5:177305805-177309842:+|nuORF	ENST00000511074.1_1_5:177305805-177309842:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	522.2896728515625	2	522.290214	1042.56587	-0.82154	-0.00042908	0.91055	0.00047557	0.089005	4.6486E-05	522.2904861090643	36.723	0.80389	36.735	36.391	37.195	0.011173					35	17	3	0	0	0	0.43769	1	2409	2409		60.972	9.7792	1	201110			61486	13013	41055	41072	69612	69612					0.04629421752088092
VISVVFRL	8	Unmodified	_VISVVFRL_					0	0	0		ENSG00000169562|ENST00000361726|GJB1	ENSG00000169562|ENST00000361726|GJB1	ENSG00000169562|ENST00000361726|GJB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.7975158691406	2	466.80002	931.585488	-2.0963	-0.00097857	-2.8224	-0.0013175	-4.9187	-0.0022961	466.79854136992486	18.836	0.83793	18.836	18.709	19.547	0					67	29	3	0	0	0	0.80706	1	362	362		19.36	4.6959	1	190850			61487	6505	41056	41073	69613	69613					0.11695842553513103
VITALKCHK	9	Unmodified	_VITALKCHK_					0	0	0		ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.8009948730469	2	506.802237	1011.58992	-0.8825	-0.00044725	-2.4541	-0.0012438	-3.3366	-0.001691	506.8008725439838	42.168	3.4048	42.866	41.632	45.037	0.69754					178	86	3	0	0	0	0.76764	1	3695	3695		34.173	5.023	1	1296600			61488	5588	41057	41074	69614	69614					0.08458983704758793
VITGSAQQSDM	11	Unmodified	_VITGSAQQSDM_					0	0	0			REV__nc|ENSG00000101938|Q9BU40-3|CHRDL1	REV__nc|ENSG00000101938|Q9BU40-3|CHRDL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.8529663085938	2	568.766245	1135.51794	2.8884	0.0016428	-0.61301	-0.00034866	2.2754	0.0012942	568.7655156691652	102.26	0.35678	102.21	102.1	102.45	-0.048729					10	8	2	0	0	0	0.14703	1	11181	11181		78.264	20.034	1	94055	+		61489	17313	41058	41075	69615	69615					-0.04440020230254049
VITKPRKKFF	10	Unmodified	_VITKPRKKFF_					0	0	0			REV__nc|ENSG00000040341|Q9NUL3-4|STAU2	REV__nc|ENSG00000040341|Q9NUL3-4|STAU2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	632.40087890625	2	632.400433	1262.78631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.139	1	16.187	15.687	16.687	0.047804								0	0	0	0.45132	1	121	121		17.468	2.6031	1		+		61490	16316	41059	41076	69616	69616					0.16543111870146276
VITLFDVG	8	Unmodified	_VITLFDVG_					0	0	0			REV__ENST00000440143.1_1_2:238990760-238999906:+|nuORF	REV__ENST00000440143.1_1_2:238990760-238999906:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.24652099609375	2	432.247286	862.48002	-1.8339	-0.00079269	1.4654	0.00063343	-0.36844	-0.00015926	432.24785776580563	97.992	1.1927	98.188	97.805	98.997	0.19585					63	26	3	0	0	0	0.89457	1	10077	10077		37.028	0	1	609590	+		61491	18994	41060	41077	69617	69617					0.04327881637232167
VITLKKAEH	9	Unmodified	_VITLKKAEH_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8179931640625	2	519.818941	1037.62333	1.8559	0.00096475	-3.2785	-0.0017042	-1.4225	-0.00073946	519.8171404866895	95.918	1.5206	96.339	95.506	97.027	0.42051					101	36	3	0	0	0	0.67345	1	11467	11467		42.396	0	1	1896300			61492	5220	41061	41078	69618	69618					0.10602308748320866
VITSILLD	8	Unmodified	_VITSILLD_					0	0	0		nc|ENSG00000122778|Q9HCM3-2|KIAA1549;ENSG00000122778|ENST00000422774|KIAA1549	nc|ENSG00000122778|Q9HCM3-2|KIAA1549	nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2658996582031	2	437.268219	872.521884	-2.1366	-0.00093428	-3.6088	-0.001578	-5.7455	-0.0025123	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.86791	1	695	695		28.254	1.4582	1	999210			61493	3245	41062	41079	69619	69619					0.08052437325773099
VIVALEEGA	9	Unmodified	_VIVALEEGA_					0	0	0		nc|ENSG00000176358|Q86UU9|TAC4	nc|ENSG00000176358|Q86UU9|TAC4	nc|ENSG00000176358|Q86UU9|TAC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7535400390625	2	450.755475	899.496398	0.78548	0.00035406	-3.6838	-0.0016605	-2.8984	-0.0013065	450.7537404283421	81.367	4.1048	81.425	80.221	84.326	0.057808					213	96	3	0	0	0	0.76996	1	7975	7975		33.516	6.7195	1	420760			61494	15112	41063	41080	69620	69620					0.0426296280331826
VIVEVNHEWI	10	Unmodified	_VIVEVNHEWI_					0	0	0			REV__ENSG00000106278|ENST00000393386|PTPRZ1	REV__ENSG00000106278|ENST00000393386|PTPRZ1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.3352661132812	2	619.332413	1236.65027	-0.71212	-0.00044104	0.88424	0.00054764	0.17212	0.0001066	619.3328577487828	60.41	0.6367	60.41	60.144	60.781	0					65	24	4	0	0	0	0.70553	1	5294	5294		44.377	0	1	426150	+		61495	17604	41064	41081	69621	69621					0.04141372568847146
VIVEVNHEWI	10	Unmodified	_VIVEVNHEWI_					0	0	0			REV__ENSG00000106278|ENST00000393386|PTPRZ1	REV__ENSG00000106278|ENST00000393386|PTPRZ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.332275390625	2	619.332413	1236.65027	-0.67557	-0.0004184	0.68922	0.00042686	0.013646	8.4513E-06	619.3327788378971	58.365	1.0872	58.758	58.397	59.485	0.39209					65	25	4	0	0	0	0.3985	1	6097	6097		64.207	10.856	1	3811700	+		61496	17604	41064	41081	69622	69622					0.04141372568847146
VIVGGCVLRP	10	Unmodified	_VIVGGCVLRP_					0	0	0			REV__ENST00000314754.12_1_1:207510715-207532952:+|nuORF	REV__ENST00000314754.12_1_1:207510715-207532952:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	507.30328369140625	2	506.802237	1011.58992	-0.27575	-0.00013975	-1.4278	-0.00072361	-1.7035	-0.00086336	506.8014898895185	55.045	1.5212	55.019	54.561	56.082	-0.025955					67	42	2	0	0	0	0.86305	1	5016	5016		31.955	0	1	166250	+		61497	24937	41065	41082	69623	69623					0.08458983704758793
VIVIEGIPG	9	Unmodified	_VIVIEGIPG_					0	0	0		ENSG00000197168|ENST00000684899|NEK5	ENSG00000197168|ENST00000684899|NEK5	ENSG00000197168|ENST00000684899|NEK5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.773681640625	2	448.776211	895.537869	0.24226	0.00010872	0.74231	0.00033313	0.98457	0.00044185	448.77645139192583	41.32	1.2151	41.289	41.029	42.244	-0.030991					57	30	2	0	0	0	0.7932	1	3016	3016		26.796	2.5934	1	330210			61498	8144	41066	41083	69624	69624					0.08592143562657384
VIVIIFNE	8	Unmodified	_VIVIIFNE_					0	0	0			REV__ENST00000315366.7_1_4:114822476-114822542:-|nuORF	REV__ENST00000315366.7_1_4:114822476-114822542:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.9302673339844	2	473.784036	945.553519	-0.42615	-0.0002019	-1.9902	-0.0009429	-2.4163	-0.0011448	473.7828976830325	21.758	0.79819	21.7	21.484	22.282	-0.057203					55	31	3	0	0	0	0.86791	1	604	604		28.254	0	1	107510	+		61499	24947	41067	41084	69625	69625					0.07856430079709753
VIVIQIAFTG	10	Unmodified	_VIVIQIAFTG_					0	0	0			REV__nc|ENSG00000157087|Q01814-4|ATP2B2	REV__nc|ENSG00000157087|Q01814-4|ATP2B2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8204345703125	2	530.823692	1059.63283	-1.2397	-0.00065807	-4.086	-0.002169	-5.3257	-0.002827	530.8215077659447	80.178	1.33	80.284	79.789	81.119	0.10527					99	40	3	0	0	0	0.86218	1	7568	7568		32.812	7.2384	1	869100	+		61500	20525	41068	41085	69626	69626					0.1054007703382922
VIVKPVLSG	9	Unmodified	_VIVKPVLSG_					0	0	0		ENST00000324545.8_2_X:41025213-41025252:+|nuORF	ENST00000324545.8_2_X:41025213-41025252:+|nuORF	ENST00000324545.8_2_X:41025213-41025252:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3009948730469	2	456.299853	910.585153	-0.84354	-0.00038491	3.2342	0.0014758	2.3906	0.0010908	456.30117331551685	46.601	1.8723	46.572	45.714	47.586	-0.028778					105	48	3	0	0	0	0.7932	1	3852	3852		26.693	2.1737	1	332630			61501	10063	41069	41086	69627	69627					0.1262842283366581
VIVLWLDM	8	Unmodified	_VIVLWLDM_					0	0	0			REV__nc|ENSG00000154025|A0PJK1-3|SLC5A10	REV__nc|ENSG00000154025|A0PJK1-3|SLC5A10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.78033447265625	2	494.780439	987.546325	-0.074951	-3.7084E-05	0.026741	1.3231E-05	-0.04821	-2.3853E-05	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.89457	1	8638	8638		37.028	1.8278	1	651380	+		61502	29939	41070	41087	69628	69628					0.05205374207639579
VIVMIQKHKA	10	Unmodified	_VIVMIQKHKA_					0	0	0		ENST00000553573.1_1_14:35286051-35295300:-|nuORF	ENST00000553573.1_1_14:35286051-35295300:-|nuORF	ENST00000553573.1_1_14:35286051-35295300:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.7633056640625	2	583.857544	1165.70053	-1.3594	-0.00079372	-1.489	-0.00086938	-2.8485	-0.0016631	584.358276635125	63.9	0.51959	64.287	63.876	64.396	0.38681					17	11	2	0	0	0	0.37624	1	6872	6872		15.642	1.5047	1	95598			61503	13700	41071	41088	69629	69629					0.12431203693017778
VIVQERKDTKP	11	Unmodified	_VIVQERKDTKP_					0	0	0		ENSG00000154781|ENST00000383794|CCDC174	ENSG00000154781|ENST00000383794|CCDC174	ENSG00000154781|ENST00000383794|CCDC174	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2578125	3	438.257626	1311.75105	0.21129	9.2599E-05	0.10345	4.5337E-05	0.31474	0.00013794	438.2576083423229	29.948	1.2574	29.973	29.652	30.909	0.025013					91	35	4	0	0	0	0.71803	1	1531	1531		28.577	2.5133	1	433100			61504	5296	41072	41089	69630	69630					0.10764404551696316
VIVRVAGSSTG	11	Unmodified	_VIVRVAGSSTG_					0	0	0			REV__nc|ENSG00000136636|Q9Y597-2|KCTD3	REV__nc|ENSG00000136636|Q9Y597-2|KCTD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3036499023438	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.67778	1	8990	8990		35.152	3.1972	1	13442000	+		61505	19323	41073	41090	69631	69631					0.07224530363282611
VIVRVAGSSTG	11	Unmodified	_VIVRVAGSSTG_					0	0	0			REV__nc|ENSG00000136636|Q9Y597-2|KCTD3	REV__nc|ENSG00000136636|Q9Y597-2|KCTD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.304931640625	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.68532	1	8307	8307		33.922	7.2287	1	3566700	+		61506	19323	41073	41090	69632	69632					0.07224530363282611
VIVTNPNKGSL	11	Unmodified	_VIVTNPNKGSL_					0	0	0			REV__nc|ENSG00000149179|Q9H6J7-3|CSTPP1	REV__nc|ENSG00000149179|Q9H6J7-3|CSTPP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	571.3314819335938	2	571.332413	1140.65027	-0.35036	-0.00020017	-1.9792	-0.0011308	-2.3296	-0.001331	571.3312644155609	102.52	1.12	102.52	102.02	103.14	0					76	28	4	0	0	0	0.72739	1	10475	10475		27.047	0.3544	1	1839200	+		61507	20153	41074	41091	69633	69633					0.08557372568861865
VIWLFLHGY	9	Unmodified	_VIWLFLHGY_					0	0	0			REV__nc|ENSG00000169994|Q6PIF6-2|MYO7B	REV__nc|ENSG00000169994|Q6PIF6-2|MYO7B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8478393554688	2	574.318577	1146.6226	0.75479	0.00043349	0.99532	0.00057163	1.7501	0.0010051	574.3190084133428	84.43	2.2126	84.489	82.984	85.196	0.05925					81	50	2	0	0	0	0.20789	1	8457	8457		21.702	6.0605	1	67634	+		61508	21624	41075	41092	69634	69634					0.055155140992837914
VIWVWLLGVLD	11	Unmodified	_VIWVWLLGVLD_					0	0	0		ENST00000443339.5_1_3:9475802-9506425:+|nuORF;ENST00000488236.5_1_3:9495468-9506425:+|nuORF	ENST00000443339.5_1_3:9475802-9506425:+|nuORF;ENST00000488236.5_1_3:9495468-9506425:+|nuORF	ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.59332275390625	3	438.260308	1311.7591	-1.5943	-0.00069873	-4.3552	-0.0019087	-5.9495	-0.0026074	438.2583289789849	29.969	0.70984	30.036	29.73	30.44	0.066727					92	32	4	0	0	0	0.70584	1	1286	1286		30.569	4.5055	1	499410			61509	11803;12618	41076	41093	69635	69635					0.11568583539133215
VIYMYSVIIVI	11	Unmodified	_VIYMYSVIIVI_					0	0	0			REV__ENSG00000170605|ENST00000641329|OR9K2	REV__ENSG00000170605|ENST00000641329|OR9K2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2576599121094	3	438.257687	1311.75123	-2.0264	-0.0008881	2.0241	0.00088706	-0.0023585	-1.0336E-06	438.2585447663128	30.099	0.96018	30.099	29.739	30.699	0					100	33	5	0	0	0	0.72739	1	1370	1370		27.047	3.6694	1	863580	+		61510	21673	41077	41094	69636	69636					0.10782688227368453
VIYMYSVIIVI	11	Unmodified	_VIYMYSVIIVI_					0	0	0			REV__ENSG00000170605|ENST00000641329|OR9K2	REV__ENSG00000170605|ENST00000641329|OR9K2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2575988769531	3	438.257687	1311.75123	-0.33086	-0.000145	0.37362	0.00016374	0.042754	1.8737E-05	438.2577888562839	29.898	1.7233	29.855	29.533	31.256	-0.043093					114	42	4	0	0	0	0.72739	2	1598	1598;1632		27.047	1.9213	1	610700	+		61511	21673	41077	41094	69637;69638	69637					0.10782688227368453
VIYMYSVIIVI	11	Unmodified	_VIYMYSVIIVI_					0	0	0			REV__ENSG00000170605|ENST00000641329|OR9K2	REV__ENSG00000170605|ENST00000641329|OR9K2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2575988769531	3	438.257687	1311.75123	1.6079	0.00070467	-1.5785	-0.00069179	0.029404	1.2886E-05	438.2569039821351	29.892	1.3479	29.877	29.524	30.872	-0.015167					99	34	5	0	0	0	0.72739	1	1571	1571		27.047	1.9213	1	559550	+		61512	21673	41077	41094	69639	69639					0.10782688227368453
VIYMYSVIIVI	11	Unmodified	_VIYMYSVIIVI_					0	0	0			REV__ENSG00000170605|ENST00000641329|OR9K2	REV__ENSG00000170605|ENST00000641329|OR9K2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2579345703125	3	438.257687	1311.75123	-1.5943	-0.00069873	1.6249	0.00071214	0.030594	1.3408E-05	438.2583289789849	29.969	0.70984	30.036	29.73	30.44	0.066727					92	32	4	0	0	0	0.69248	2	1297	1297;1310		32.751	6.6872	1	499410	+		61513	21673	41077	41094	69640;69641	69640					0.10782688227368453
VIYMYSVIIVI	11	Unmodified	_VIYMYSVIIVI_					0	0	0			REV__ENSG00000170605|ENST00000641329|OR9K2	REV__ENSG00000170605|ENST00000641329|OR9K2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.25701904296875	3	438.257687	1311.75123	0.097654	4.2798E-05	0.019004	8.3285E-06	0.11666	5.1126E-05	438.25764913166114	29.606	0.75126	29.719	29.373	30.124	0.11225					122	37	5	0	0	0	0.69248	1	1268	1268		32.751	0	1	517110	+		61514	21673	41077	41094	69642	69642					0.10782688227368453
VIYMYSVIIVI	11	Unmodified	_VIYMYSVIIVI_					0	0	0			REV__ENSG00000170605|ENST00000641329|OR9K2	REV__ENSG00000170605|ENST00000641329|OR9K2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.25750732421875	3	438.257687	1311.75123	0.55491	0.00024319	-0.91106	-0.00039928	-0.35615	-0.00015609	438.25727820640566	29.88	1.2979	29.791	29.362	30.659	-0.089544					102	29	5	0	0	0	0.69931	1	1927	1927		31.634	1.0654	1	6394700	+		61515	21673	41077	41094	69643	69643					0.10782688227368453
VIYPARISL	9	Unmodified	_VIYPARISL_					0	0	0		ENSG00000132002|ENST00000254322|DNAJB1;nc|ENSG00000132002|P25685-2|DNAJB1	ENSG00000132002|ENST00000254322|DNAJB1	ENSG00000132002|ENST00000254322|DNAJB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3154296875	2	516.316035	1030.61752	0.04847	2.5026E-05	0.2935	0.00015154	0.34197	0.00017657	516.3158625296053	62.259	1.1248	62.813	62.214	63.339	0.55449					57	25	3	0	0	0	0.33718	1	6677	6677		62.107	1.1355	1	588050			61516	3758	41078	41095	69644	69644					0.10343210236646883
VIYSSLTG	8	Unmodified	_VIYSSLTG_					0	0	0			REV__ENSG00000082068|ENST00000265107|WDR70	REV__ENSG00000082068|ENST00000265107|WDR70	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2281188964844	2	420.229094	838.443634	-0.26172	-0.00010998	-2.7119	-0.0011396	-2.9737	-0.0012496	420.2278427718772	76.28	2.2676	76.231	74.595	76.863	-0.048271					136	69	3	0	0	0	0.884	1	7504	7504		33.516	5.6333	1	253020	+		61517	16830	41079	41096	69645	69645					0.017950047405292935
VIYSSLTG	8	Unmodified	_VIYSSLTG_					0	0	0			REV__ENSG00000082068|ENST00000265107|WDR70	REV__ENSG00000082068|ENST00000265107|WDR70	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2274169921875	2	420.229094	838.443634	-1.5729	-0.000661	-1.3827	-0.00058106	-2.9557	-0.0012421	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.86288	3	7601	7429;7569;7601		35.201	1.6851	1	634680	+		61518	16830	41079	41096	69646;69647;69648	69648					0.017950047405292935
VIYSTPLPEK	10	Unmodified	_VIYSTPLPEK_					0	0	0		nc|ENSG00000109787|P57682-2|KLF3;ENSG00000109787|ENST00000261438|KLF3	nc|ENSG00000109787|P57682-2|KLF3	nc|ENSG00000109787|P57682-2|KLF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.8228759765625	2	573.823889	1145.63323	-1.4116	-0.00081	1.0963	0.00062909	-0.31527	-0.00018091	573.8243554533791	48.095	0.76067	48.565	48.194	48.954	0.46941					46	18	4	0	0	0	0.18075	1	4616	4616		90.601	16.346	1	1396500			61519	2484	41080	41097	69649	69649					0.06623451963059779
VIYSTPLPEK	10	Unmodified	_VIYSTPLPEK_					0	0	0		nc|ENSG00000109787|P57682-2|KLF3;ENSG00000109787|ENST00000261438|KLF3	nc|ENSG00000109787|P57682-2|KLF3	nc|ENSG00000109787|P57682-2|KLF3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	573.8238525390625	2	573.823889	1145.63323	-0.56798	-0.00032592	0.2906	0.00016675	-0.27739	-0.00015917	573.8239162184817	47.872	0.7576	48.796	48.429	49.187	0.92315					48	18	4	0	0	0	0.42393	2	4589	4589;4612		62.107	10.772	1	1549600			61520	2484	41080	41097	69650;69651	69650					0.06623451963059779
VIYTRNTK	8	Unmodified	_VIYTRNTK_					0	0	0		ENSG00000118181|ENST00000527673|RPS25;ENST00000392902.2_1_9:125791658-125791787:-|nuORF;ENST00000418538.1_1_3:53508733-53508949:-|nuORF	ENSG00000118181|ENST00000527673|RPS25	ENSG00000118181|ENST00000527673|RPS25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.78826904296875	2	497.787641	993.56073	1.6278	0.00081031	-2.1013	-0.001046	-0.47343	-0.00023567	497.7865959491483	26.998	1.538	26.657	26.141	27.679	-0.34035					81	34	5	0	0	0	0.5397	1	1507	1507		73.975	4.3471	1	5852300			61521	3015	41081	41098	69652	69652					0.06369162680141471
VKAAKEEPVKL	11	Unmodified	_VKAAKEEPVKL_					0	0	0			REV__nc|ENSG00000118482|Q92576-2|PHF3	REV__nc|ENSG00000118482|Q92576-2|PHF3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	606.3697509765625	2	606.371538	1210.72852	0.84903	0.00051483	-4.1925	-0.0025422	-3.3434	-0.0020274	606.3688643769136	94.076	3.4223	94.237	93.324	96.746	0.16118					202	81	3	0	0	0	0.7144	2	9544	9544;9676		29.17	7.4843	1	934800	+		61522	18314	41082	41099	69653;69654	69653					0.13158805154080255
VKAGSEKADP	10	Unmodified	_VKAGSEKADP_					0	0	0		nc|ENSG00000117676|Q15418-4|RPS6KA1;ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1;ENST00000524436.5_1_1:26856411-26877988:+|nuORF;ENST00000530607.1_1_1:26872355-26877988:+|nuORF	nc|ENSG00000117676|Q15418-4|RPS6KA1	nc|ENSG00000117676|Q15418-4|RPS6KA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.275634765625	2	501.266739	1000.51892	-1.2932	-0.00064822	-3.5182	-0.0017635	-4.8114	-0.0024118	501.2647035709269	43.709	0.40469	44.483	44.303	44.707	0.7738					11	9	2	0	0	0	0.37624	1	4010	4010		35.152	8.4591	1	339080			61523	2996	41083	41100	69655	69655					0.018685622009456893
VKAHGKKV	8	Unmodified	_VKAHGKKV_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7528991699219	2	433.782162	865.549771	-0.91854	-0.00039845	-2.1019	-0.00091178	-3.0205	-0.0013102	433.78143823231716	61.892	1.1251	62.28	61.671	62.796	0.38846					30	25	2	0	0	0	0.4196	1	6598	6598		26.796	0	1	49281		+	61524	8826;620	41084	41101	69656	69656					0.11161805096503485
VKAKIAEKRQ	10	Unmodified	_VKAKIAEKRQ_					0	0	0			REV__ENST00000565881.5_1_15:75130108-75132610:-|nuORF	REV__ENST00000565881.5_1_15:75130108-75132610:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.8662719726562	2	585.869497	1169.72444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.969	1	26.793	26.293	27.293	-0.17559								0	0	0	0.45132	1	1518	1518		21.96	2.8564	1		+		61525	19622	41085	41102	69657	69657					0.1463676045102602
VKAKKAKP	8	Unmodified	_VKAKKAKP_					0	0	0			REV__ENSG00000106344|ENST00000223073|RBM28	REV__ENSG00000106344|ENST00000223073|RBM28	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3003234863281	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.86288	1	8306	8306		26.796	2.5934	1	6323600	+		61526	17608	41086	41103	69658	69658					0.14627262273359065
VKAKRKHTPF	10	Unmodified	_VKAKRKHTPF_					0	0	0			REV__ENSG00000164946|ENST00000380880|FREM1	REV__ENSG00000164946|ENST00000380880|FREM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	606.3704223632812	2	606.372207	1210.72986	-1.2685	-0.00076921	-3.1415	-0.0019049	-4.41	-0.0026741	606.3701560036764	94.138	3.3846	94.336	93.315	96.7	0.19827					184	80	3	0	0	0	0.85466	1	9540	9540		20.947	1.587	1	823240	+		61527	21133	41087	41104	69659	69659					0.13292484033490837
VKAKTQLVTY	10	Unmodified	_VKAKTQLVTY_					0	0	0			REV__nc|ENSG00000104812|P13807-2|GYS1	REV__nc|ENSG00000104812|P13807-2|GYS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8434448242188	2	575.845156	1149.67576	-1.368	-0.00078775	-1.5475	-0.00089109	-2.9154	-0.0016788	575.8440641799327	103.68	0.88007	103.79	103.5	104.38	0.11494					45	21	3	0	0	0	0.8505	1	10928	10928		19.104	0.77911	1	381680	+		61528	17473	41088	41105	69660	69660					0.10690847091314026
VKALQTATR	9	Unmodified	_VKALQTATR_					0	0	0		ENSG00000158286|ENST00000377939|RNF207;ENST00000496676.5_1_1:6269476-6272097:+|nuORF;ENST00000485539.5_1_1:6269452-6270654:+|nuORF	ENSG00000158286|ENST00000377939|RNF207	ENSG00000158286|ENST00000377939|RNF207	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.3007507324219	2	494.300916	986.587279	-0.0748	-3.6974E-05	-0.3174	-0.00015689	-0.3922	-0.00019387	494.30075143902303	97.483	4.0876	97.54	96.775	100.86	0.056839					393	94	6	0	0	0	0.76764	2	10475	10463;10475		34.173	5.023	1	54076000			61529	5468	41089	41106	69661;69662	69662					0.09344851571472645
VKALQTATR	9	Unmodified	_VKALQTATR_					0	0	0		ENSG00000158286|ENST00000377939|RNF207;ENST00000496676.5_1_1:6269476-6272097:+|nuORF;ENST00000485539.5_1_1:6269452-6270654:+|nuORF	ENSG00000158286|ENST00000377939|RNF207	ENSG00000158286|ENST00000377939|RNF207	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.30072021484375	2	494.300916	986.587279	1.003	0.00049577	-1.194	-0.00059017	-0.19099	-9.4404E-05	494.3002402240543	96.954	3.9557	97.359	96.674	100.63	0.40498					299	97	6	0	0	0	0.73802	2	11705	11705;11729		37.812	3.639	1	25258000			61530	5468	41089	41106	69663;69664	69663					0.09344851571472645
VKAQKSLHMCV	11	Unmodified	_VKAQKSLHMCV_					0	0	0		nc|ENSG00000090905|Q8NDV7-2|TNRC6A;nc|ENSG00000090905|Q8NDV7-6|TNRC6A;nc|ENSG00000090905|Q8NDV7-5|TNRC6A;ENSG00000090905|ENST00000395799|TNRC6A;nc|ENSG00000090905|Q8NDV7-4|TNRC6A;ENST00000464539.1_1_16:24833345-24835125:+|nuORF	nc|ENSG00000090905|Q8NDV7-2|TNRC6A	nc|ENSG00000090905|Q8NDV7-2|TNRC6A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	622.336181640625	2	622.336118	1242.65768	2.9643	0.0018448	-2.5227	-0.00157	0.44162	0.00027484	622.334405324513	110.79	1.531	110.77	110.44	111.97	-0.026314					133	51	3	0	0	0	0.75121	1	12303	12303		12.812	0	1	435720			61531	1659	41090	41107	69665	69665					0.046060655732617306
VKAQTASLFY	10	Unmodified	_VKAQTASLFY_					0	0	0		ENST00000506793.5_1_4:44680541-44700695:+|nuORF;ENSG00000151806|ENST00000281543|GUF1	ENST00000506793.5_1_4:44680541-44700695:+|nuORF	ENST00000506793.5_1_4:44680541-44700695:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.3081665039062	2	564.308406	1126.60226	0.48028	0.00027102	-0.53507	-0.00030194	-0.054791	-3.0919E-05	564.3080689248469	74.956	0.69521	75.52	75.289	75.984	0.56458					40	16	4	0	0	0	0.66675	1	8515	8515		46.457	7.7032	1	1100100			61532	5144	41091	41108	69666	69666					0.04402298648778924
VKARGLLL	8	Unmodified	_VKARGLLL_					0	0	0		chr12:56311111-56311211|26|31.31|0.0|21.58|-|2|None,CNPY2|2	chr12:56311111-56311211|26|31.31|0.0|21.58|-|2|None,CNPY2|2	chr12:56311111-56311211|26|31.31|0.0|21.58|-|2|None,CNPY2|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2995910644531	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.80706	1	6470	6470		19.36	0	1	1819800			61533	135	41092	41109	69667	69667					0.14627262273381803
VKARLQKYSTK	11	Unmodified	_VKARLQKYSTK_					0	0	0		ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-3|CBLB;nc|ENSG00000114423|Q13191-2|CBLB	ENSG00000114423|ENST00000394030|CBLB	ENSG00000114423|ENST00000394030|CBLB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.6024475097656	3	441.269866	1320.78777	-1.49	-0.00065751	-3.2618	-0.0014393	-4.7518	-0.0020968	441.26834688248266	54.071	1.5602	54.127	53.341	54.901	0.055614					103	52	3	0	0	0	0.76384	1	4456	4456		18.966	0.43528	1	145180			61534	2769	41093	41110	69668	69668					0.1402070116826053
VKARRPVPRR	10	Unmodified	_VKARRPVPRR_					0	0	0		nc|ENSG00000173575|O14647-2|CHD2;ENSG00000173575|ENST00000394196|CHD2;nc|ENSG00000173575|O14647-3|CHD2	nc|ENSG00000173575|O14647-2|CHD2	nc|ENSG00000173575|O14647-2|CHD2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2374572753906	3	412.270424	1233.78944	-1.435	-0.00059163	4.341	0.0017897	2.9059	0.001198	412.2714550620685	74.404	0.25554	74.49	74.372	74.628	0.085907					12	9	2	0	0	0	0.37624	1	6867	6867		25.126	6.5949	1	67357			61535	6870	41094	41111	69669	69669					0.18189799767537806
VKASTTLD	8	Unmodified	_VKASTTLD_					0	0	0		ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	ENSG00000131711|ENST00000296755|MAP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.73193359375	2	417.732	833.449448	-0.38661	-0.0001615	2.4218	0.0010117	2.0352	0.00085018	417.7328812532225	32.937	0.70779	32.883	32.626	33.334	-0.05434					39	17	4	0	0	0	0.89962	1	1955	1955		38.806	12.01	1	130120			61536	3743	41095	41112	69670	69670					0.026061032521852212
VKAVRILA	8	Unmodified	_VKAVRILA_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3002624511719	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.81724	1	6928	6928		14.664	0	1	1680500			61537	8948	41096	41113	69671	69671					0.14627262273370434
VKAWMLADN	9	Unmodified	_VKAWMLADN_					0	0	0			REV__ENSG00000150627|ENST00000508596|WDR17	REV__ENSG00000150627|ENST00000508596|WDR17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.2676391601562	2	524.268227	1046.5219	-0.94371	-0.00049476	-0.80439	-0.00042171	-1.7481	-0.00091647	524.2679559011215	42.548	0.65496	42.982	42.765	43.419	0.4334					30	15	3	0	0	0	0.19437	1	3807	3807		75.043	14.749	1	1404000	+		61538	20215	41097	41114	69672	69672					0.0005011405410186853
VKCEELFIT	9	Unmodified	_VKCEELFIT_					0	0	0		ENST00000429105.1_1_1:224762276-224762375:+|nuORF	ENST00000429105.1_1_1:224762276-224762375:+|nuORF	ENST00000429105.1_1_1:224762276-224762375:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.2886352539062	2	541.283543	1080.55253	0.52598	0.00028471	2.8745	0.0015559	3.4005	0.0018406	541.2849430955068	20.499	0.76031	20.43	20.175	20.935	-0.069733					65	32	4	0	0	0	0.78058	1	524	524		30.504	0.18592	1	220230			61539	11601	41098	41115	69673	69673					0.015478476484986459
VKCPRKIL	8	Unmodified	_VKCPRKIL_					0	0	0			REV__ENST00000464685.1_1_2:99785961-99787892:-|nuORF	REV__ENST00000464685.1_1_2:99785961-99787892:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8045349121094	2	478.807322	955.600092	-1.7576	-0.00084154	-0.70314	-0.00033667	-2.4607	-0.0011782	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.86288	1	2404	2404		26.796	2.5934	1	336090	+		61540	20603	41099	41116	69674	69674					0.12051591430019926
VKDKLRATT	9	Unmodified	_VKDKLRATT_					0	0	0		ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3131713867188	2	516.314023	1030.61349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.56	1	114.62	114.12	115.12	0.061073								0	0	0	0.3041	1	12245	12245		29.17	0.020503	1				61541	7166	41100	41117	69675	69675					0.09941120742928433
VKDMRKETLQ	10	Unmodified	_VKDMRKETLQ_					0	0	0			REV__ENSG00000125730|ENST00000245907|C3	REV__ENSG00000125730|ENST00000245907|C3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	624.8443603515625	2	624.342455	1246.67036	-0.3684	-0.00023	3.9932	0.0024931	3.6248	0.0022631	624.3446612598758	43.838	0.68599	44.288	43.963	44.649	0.45025					32	16	3	0	0	0	0.21391	1	3995	3995		82.75	4.4867	1	833180	+	+	61542	18661	41101	41118	69676	69676					0.05688800237180658
VKDMRKETLQ	10	Unmodified	_VKDMRKETLQ_					0	0	0			REV__ENSG00000125730|ENST00000245907|C3	REV__ENSG00000125730|ENST00000245907|C3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	624.342455	1246.67036	-0.3684	-0.00023	3.9932	0.0024931	3.6248	0.0022631	624.3446612598758	43.838	0.68599	44.288	43.963	44.649	0.45025	-0.050664	2.704E-05	NaN	82.75	32	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	833180	+	+	61543	18661	41101	41118							0.05688800237180658
VKDRILKPSR	10	Unmodified	_VKDRILKPSR_					0	0	0		L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|9|1|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|9|1|sense	L1MA6_dup4758|chr15:71158453-71163267:-|1.5395915874076365|0.2693555967000081|2.51|63.0|9|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.58929443359375	3	404.59094	1210.75099	-0.19379	-7.8407E-05	-4.1135	-0.0016643	-4.3073	-0.0017427	404.5891664662758	39.222	1.192	39.169	38.578	39.77	-0.052727					84	33	3	0	0	0	0.86409	1	2383	2383		25.126	2.5463	1	333770			61544	14570	41102	41119	69677	69677					0.15404449342349835
VKDRYVRVSN	10	Unmodified	_VKDRYVRVSN_					0	0	0		nc|ENSG00000151092|Q96IV0-3|NGLY1;nc|ENSG00000151092|Q96IV0-2|NGLY1;ENSG00000151092|ENST00000280700|NGLY1;ENST00000467224.5_1_3:25761125-25775431:-|nuORF;ENST00000496726.5_1_3:25760953-25775482:-|nuORF;nc|ENSG00000151092|Q96IV0-5|NGLY1	nc|ENSG00000151092|Q96IV0-3|NGLY1	nc|ENSG00000151092|Q96IV0-3|NGLY1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.3458251953125	2	618.346386	1234.67822	0.89263	0.00055195	-1.663	-0.0010283	-0.77033	-0.00047633	618.3452359789501	97.829	3.1632	97.989	96.92	100.08	0.16073					214	73	4	0	0	0	0.86348	1	10072	10072		31.53	1.2121	1	874220			61545	5093	41103	41120	69678	69678					0.0702669554896147
VKDYGKESQAK	11	Unmodified	_VKDYGKESQAK_					0	0	0		ENST00000492017.3_1_15:90750052-90750184:+|nuORF;ENSG00000112306|ENST00000230050|RPS12	ENST00000492017.3_1_15:90750052-90750184:+|nuORF	ENST00000492017.3_1_15:90750052-90750184:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.91583251953125	3	418.222582	1251.64592	-0.32686	-0.0001367	1.8492	0.00077336	1.5223	0.00063666	418.22311369495156	31.114	0.66088	31.194	30.767	31.428	0.079836					24	14	2	0	0	0	0.17363	1	2047	2047		44.639	14.071	1	70652			61546	2654	41104	41121	69679	69679					0.030158633552673564
VKEALHRLFT	10	Unmodified	_VKEALHRLFT_					0	0	0		nc|ENSG00000203995|Q6WRX3-2|ZYG11A;ENSG00000203995|ENST00000371528|ZYG11A	nc|ENSG00000203995|Q6WRX3-2|ZYG11A	nc|ENSG00000203995|Q6WRX3-2|ZYG11A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.2403259277344	3	405.239907	1212.69789	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.71	1	103.01	102.51	103.51	0.29865								0	0	0	0.45132	1	12522	12522		27.644	5.9582	1				61547	8405	41105	41122	69680	69680					0.100050715596808
VKEKKETSGK	10	Unmodified	_VKEKKETSGK_					0	0	0			REV__nc|ENSG00000043143|Q9NQC1-3|JADE2	REV__nc|ENSG00000043143|Q9NQC1-3|JADE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3296508789062	2	567.32987	1132.64519	-0.468	-0.00026551	0.65202	0.00036991	0.18402	0.0001044	567.330130226139	95.712	2.0668	95.712	95.357	97.424	0					107	47	3	0	0	0	0.86338	1	9581	9581		31.634	2.4642	1	608220	+		61548	16335	41106	41123	69681	69681					0.08417068706262398
VKEKKETSGK	10	Unmodified	_VKEKKETSGK_					0	0	0			REV__nc|ENSG00000043143|Q9NQC1-3|JADE2	REV__nc|ENSG00000043143|Q9NQC1-3|JADE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3294677734375	2	567.32987	1132.64519	1.497	0.00084932	-1.6772	-0.00095153	-0.18017	-0.00010222	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.86218	1	9720	9720		32.812	1.2826	1	15259000	+		61549	16335	41106	41123	69682	69682					0.08417068706262398
VKEKKKSKKLF	11	Unmodified	_VKEKKKSKKLF_					0	0	0			REV__ENSG00000075340|ENST00000264436|ADD2	REV__ENSG00000075340|ENST00000264436|ADD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	454.96710205078125	3	454.965895	1361.87586	-1.2289	-0.00055911	3.2996	0.0015012	2.0707	0.00094208	454.9672058394649	41.291	1.22	41.25	40.922	42.142	-0.040806					93	31	4	0	0	0	0.79476	1	3074	3074		12.433	3.221	1	820870	+		61550	16709	41107	41124	69683	69683					0.2093932175887403
VKEKKKSKKLF	11	Unmodified	_VKEKKKSKKLF_					0	0	0			REV__ENSG00000075340|ENST00000264436|ADD2	REV__ENSG00000075340|ENST00000264436|ADD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.3013000488281	3	454.965895	1361.87586	-0.85763	-0.00039019	2.9715	0.0013519	2.1139	0.00096174	454.96706899495365	41.367	1.3426	41.373	40.948	42.29	0.0065727					90	33	4	0	0	0	0.82431	1	3030	3030		7.6794	2.537	1	458770	+		61551	16709	41107	41124	69684	69684					0.2093932175887403
VKEKKKSKKLF	11	Unmodified	_VKEKKKSKKLF_					0	0	0			REV__ENSG00000075340|ENST00000264436|ADD2	REV__ENSG00000075340|ENST00000264436|ADD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.9658203125	3	454.965895	1361.87586	-2.4763	-0.0011267	3.2436	0.0014757	0.76726	0.00034908	454.9672822128271	40.296	0.82854	40.688	40.337	41.165	0.39209					69	22	4	0	0	0	0.82431	2	3428	3428;3441		7.6794	1.3585	1	12658000	+		61552	16709	41107	41124	69685;69686	69685					0.2093932175887403
VKEKKKSKKLF	11	Unmodified	_VKEKKKSKKLF_					0	0	0			REV__ENSG00000075340|ENST00000264436|ADD2	REV__ENSG00000075340|ENST00000264436|ADD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.9656066894531	3	454.965895	1361.87586	-3.0236	-0.0013756	4.3236	0.0019671	1.3001	0.00059149	454.96769809501745	41.183	0.94011	41.575	41.202	42.142	0.39209					77	25	4	0	0	0	0.77803	1	3574	3574		15.921	3.4878	1	7191500	+		61553	16709	41107	41124	69687	69687					0.2093932175887403
VKEKKKSKKLF	11	Unmodified	_VKEKKKSKKLF_					0	0	0			REV__ENSG00000075340|ENST00000264436|ADD2	REV__ENSG00000075340|ENST00000264436|ADD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.9644470214844	3	454.965895	1361.87586	-1.4336	-0.00065226	2.1078	0.00095897	0.67416	0.00030672	454.9667637640074	40.21	1.0197	40.799	40.26	41.28	0.58915					78	26	4	0	0	0	0.82431	1	3427	3427		7.6794	2.2665	1	11642000	+		61554	16709	41107	41124	69688	69688					0.2093932175887403
VKEKKKSKKLF	11	Unmodified	_VKEKKKSKKLF_					0	0	0			REV__ENSG00000075340|ENST00000264436|ADD2	REV__ENSG00000075340|ENST00000264436|ADD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.9630126953125	3	454.965895	1361.87586	-1.575	-0.00071655	3.2609	0.0014836	1.6859	0.00076703	454.9672336092607	41.073	1.0297	41.707	41.324	42.354	0.6339					72	28	5	0	0	0	0.79945	1	3580	3580		11.455	4.0549	1	10012000	+		61555	16709	41107	41124	69689	69689					0.2093932175887403
VKEKKKSKKLF	11	Unmodified	_VKEKKKSKKLF_					0	0	0			REV__ENSG00000075340|ENST00000264436|ADD2	REV__ENSG00000075340|ENST00000264436|ADD2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	454.965895	1361.87586	-1.575	-0.00071655	3.2609	0.0014836	1.6859	0.00076703	454.9672336092607	41.073	1.0297	41.707	41.324	42.354	0.6339	0.06607	-0.00078821	NaN	15.921	72	28	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10012000	+		61556	16709	41107	41124							0.2093932175887403
VKEKLRRRL	9	Unmodified	_VKEKLRRRL_					0	0	0			REV__nc|ENSG00000134030|O43310-2|CTIF	REV__nc|ENSG00000134030|O43310-2|CTIF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	599.3975830078125	2	599.398756	1196.78296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.686	1	21.243	20.743	21.743	-0.44324								0	0	0	0.3307	1	808	808		19.997	2.6318	1		+		61557	29855	41108	41125	69690	69690					0.19243861816153185
VKEQARTLKK	10	Unmodified	_VKEQARTLKK_					0	0	0			REV__nc|ENSG00000136717|O00499-3|BIN1	REV__nc|ENSG00000136717|O00499-3|BIN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.5877380371094	3	400.918945	1199.73501	0.17971	7.205E-05	-3.7823	-0.0015164	-3.6026	-0.0014443	400.9173734936272	16.316	0.27673	15.717	15.601	15.878	-0.59873					7	5	2	0	0	0	0.37624	1	112	112		59.931	0	1	29169	+		61558	19329	41109	41126	69691	69691					0.1431274310543813
VKEQSLIH	8	Unmodified	_VKEQSLIH_					0	0	0			REV__ENSG00000184898|ENST00000331426|RBM43	REV__ENSG00000184898|ENST00000331426|RBM43	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.80255126953125	2	477.274367	952.53418	-0.065252	-3.1143E-05	-0.19809	-9.4545E-05	-0.26335	-0.00012569	477.27410315732254	50.418	0.60944	51.17	50.881	51.491	0.75174					19	14	2	0	0	0	0.4196	1	4982	4982		53.351	5.4358	1	179270	+		61559	22709	41110	41127	69692	69692					0.05601473788817657
VKERGGAPN	9	Unmodified	_VKERGGAPN_					0	0	0			REV__ENST00000550487.5_1_12:50505841-50505931:+|nuORF	REV__ENST00000550487.5_1_12:50505841-50505931:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2539978027344	2	464.253966	926.493378	0.086658	4.0231E-05	0.020943	9.7228E-06	0.1076	4.9954E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.75725	1	8467	8467		36.447	0	1	1673200	+		61560	28600	41111	41128	69693	69693					0.027191324691898444
VKERGGAPN	9	Unmodified	_VKERGGAPN_					0	0	0			REV__ENST00000550487.5_1_12:50505841-50505931:+|nuORF	REV__ENST00000550487.5_1_12:50505841-50505931:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2538146972656	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.71772	1	8064	8064		39.253	0	1	1603800	+		61561	28600	41111	41128	69694	69694					0.027191324691898444
VKEVSGFG	8	Unmodified	_VKEVSGFG_					0	0	0			REV__nc|ENSG00000164270|Q13639-9|HTR4	REV__nc|ENSG00000164270|Q13639-9|HTR4	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	411.21820068359375	2	411.721436	821.428318	-1.1931	-0.00049121	4.4092	0.0018154	3.2161	0.0013241	411.72486354576176	87.387	0.60453	87.387	86.908	87.512	0					23	13	2	0	0	0	0.4196	1	8361	8361		12.207	0	1	52237	+		61562	29989	41112	41129	69695	69695					0.010461379433536422
VKEVVGPI	8	Unmodified	_VKEVVGPI_					0	0	0			REV__ENSG00000039123|ENST00000230640|MTREX	REV__ENSG00000039123|ENST00000230640|MTREX	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.7042541503906	2	420.763104	839.511654	0.14584	6.1362E-05	3.7349	0.0015715	3.8808	0.0016329	420.7644758733377	35.438	0.60936	35.544	35.345	35.954	0.10603					30	19	2	0	0	0	0.4196	1	1927	1927		8.2313	0.54101	1	61922	+		61563	16309	41113	41130	69696	69696					0.08547874391183541
VKFFQRKV	8	Unmodified	_VKFFQRKV_					0	0	0		ENSG00000110887|ENST00000228476|DAO	ENSG00000110887|ENST00000228476|DAO	ENSG00000110887|ENST00000228476|DAO	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3237915039062	2	526.324194	1050.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.114	1	62.13	61.63	62.63	0.015724								0	0	0	0.29452	1	5414	5414		33.516	13.034	1				61564	2548	41114	41131	69697	69697					0.11054336193410563
VKFGAVAGAQL	11	Unmodified	_VKFGAVAGAQL_					0	0	0			REV__ENST00000468221.5_1_2:219248908-219249148:+|nuORF	REV__ENST00000468221.5_1_2:219248908-219249148:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2929077148438	2	530.811116	1059.60768	-1.3191	-0.00070018	-2.6902	-0.001428	-4.0093	-0.0021282	530.8088656315564	90.358	0.51488	90.828	90.687	91.202	0.47068					17	12	2	0	0	0	0.17551	1	10770	10770		54.776	5.3348	1	124180	+		61565	27178	41115	41132	69698	69698					0.0802602223127451
VKFIPGSALN	10	Unmodified	_VKFIPGSALN_					0	0	0		ENSG00000067704|ENST00000366922|IARS2	ENSG00000067704|ENST00000366922|IARS2	ENSG00000067704|ENST00000366922|IARS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.305667	1044.59678	-1.4863	-0.0007778	-2.6443	-0.0013838	-4.1306	-0.0021616	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.86471	1	8404	8404		30.318	2.0634	1	3566700			61566	1187	41116	41133	69699	69699					0.0762661985700106
VKFKIGGKEVF	11	Unmodified	_VKFKIGGKEVF_					0	0	0		ENSG00000175471|ENST00000515393|MCTP1;nc|ENSG00000175471|Q6DN14-4|MCTP1;nc|ENSG00000175471|Q6DN14-2|MCTP1;nc|ENSG00000175471|Q6DN14-3|MCTP1	ENSG00000175471|ENST00000515393|MCTP1	ENSG00000175471|ENST00000515393|MCTP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.9227294921875	3	417.920174	1250.73869	3.1807	0.0013293	1.9124	0.00079924	5.0931	0.0021285	417.9209605426618	105.73	2.7025	105.77	104.99	107.7	0.038322					262	63	6	0	0	0	0.75164	1	11793	11793		19.627	6.6695	1	23553000			61567	7019	41117	41134	69700	69700					0.123354128793153
VKFKKLLR	8	Unmodified	_VKFKKLLR_					0	0	0			REV__ENSG00000151779|ENST00000281513|NBAS;REV__nc|ENSG00000151779|A2RRP1-2|NBAS	REV__nc|ENSG00000151779|A2RRP1-2|NBAS	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3135375976562	2	516.358037	1030.70152	2.7564	0.0014233	4.3034	0.0022221	7.0598	0.0036454	516.3605340438826	99.327	0.40529	99.273	98.955	99.36	-0.053734					15	9	2	0	0	0	0.4196	1	10743	10743		3.6843	0	1	118860	+		61568	20268;29931	41118	41135	69701	69701					0.18739786124206148
VKFQPLVTTT	10	Unmodified	_VKFQPLVTTT_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3302001953125	2	567.331882	1132.64921	-0.54401	-0.00030863	-2.6363	-0.0014957	-3.1803	-0.0018043	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.86218	1	8750	8750		32.812	2.3088	1	4477200	+		61569	25825	41119	41136	69702	69702					0.08819158199935373
VKFQPLVTTT	10	Unmodified	_VKFQPLVTTT_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3301391601562	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.80179	2	9313	9313;9336		39.253	6.4404	1	11042000	+		61570	25825	41119	41136	69703;69704	69703					0.08819158199935373
VKFQPLVTTT	10	Unmodified	_VKFQPLVTTT_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3297729492188	2	567.331882	1132.64921	-1.2007	-0.00068122	-1.9524	-0.0011076	-3.1531	-0.0017889	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.8608	2	9305	9232;9305		34.173	3.6689	1	5763000	+		61571	25825	41119	41136	69705;69706	69706					0.08819158199935373
VKFQPLVTTT	10	Unmodified	_VKFQPLVTTT_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.329345703125	2	567.331882	1132.64921	-1.2006	-0.00068114	-2.532	-0.0014365	-3.7326	-0.0021176	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.77314	4	9645	9597;9645;9887;9923		40.778	5.0025	1	15673000	+		61572	25825	41119	41136	69707;69708;69709;69710	69708					0.08819158199935373
VKFQPLVTTT	10	Unmodified	_VKFQPLVTTT_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3298950195312	2	567.331882	1132.64921	0.48509	0.00027521	-4.2285	-0.0023989	-3.7434	-0.0021237	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.86218	3	9473	9473;9485;9557		32.812	4.7437	1	18558000	+		61573	25825	41119	41136	69711;69712;69713	69711					0.08819158199935373
VKFQPLVTTT	10	Unmodified	_VKFQPLVTTT_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3297729492188	2	567.331882	1132.64921	0.77491	0.00043963	-4.0071	-0.0022734	-3.2322	-0.0018337	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.86218	1	9008	9008		32.812	3.6424	1	6344600	+		61574	25825	41119	41136	69714	69714					0.08819158199935373
VKFQPLVTTT	10	Unmodified	_VKFQPLVTTT_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3296508789062	2	567.331882	1132.64921	-1.3957	-0.00079181	-1.9666	-0.0011157	-3.3623	-0.0019075	567.3306362135603	90.362	2.8553	90.538	88.541	91.396	0.1758					275	67	6	0	0	0	0.86218	2	8962	8962;9047		32.812	0	1	5956400	+		61575	25825	41119	41136	69715;69716	69715					0.08819158199935373
VKFQPLVTTT	10	Unmodified	_VKFQPLVTTT_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.329345703125	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86218	2	9406	9406;9442		32.812	1.2826	1	17338000	+		61576	25825	41119	41136	69717;69718	69717					0.08819158199935373
VKFQPLVTTT	10	Unmodified	_VKFQPLVTTT_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3299560546875	2	567.331882	1132.64921	-0.50942	-0.00028901	-1.8517	-0.0010506	-2.3612	-0.0013396	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.86218	1	10613	10613		32.812	1.2826	1	5685000	+		61577	25825	41119	41136	69719	69719					0.08819158199935373
VKFQPLVTTT	10	Unmodified	_VKFQPLVTTT_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3297119140625	2	567.331882	1132.64921	0.27026	0.00015333	-3.6079	-0.0020469	-3.3376	-0.0018935	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.51302	3	11452	11001;11123;11452		54.776	23.247	1	6007000	+		61578	25825	41119	41136	69720;69721;69722	69722					0.08819158199935373
VKFQRRLFG	9	Unmodified	_VKFQRRLFG_					0	0	0			REV__ENSG00000101327|ENST00000217305|PDYN	REV__ENSG00000101327|ENST00000217305|PDYN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.842529296875	2	575.845825	1149.6771	-1.368	-0.00078773	-3.7183	-0.0021412	-5.0862	-0.0029289	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.78058	1	9407	9407		30.504	2.6214	1	6121300	+		61579	17266	41120	41137	69723	69723					0.10824525970679133
VKFTKVLLQYT	11	Unmodified	_VKFTKVLLQYT_					0	0	0		ENSG00000138435|ENST00000348749|CHRNA1;nc|ENSG00000138435|P02708-1|CHRNA1;chr2:174757675-174757946|22|53.91|0.97|5.8|-|ENST00000261007|CHRNA1,CHRNA1	ENSG00000138435|ENST00000348749|CHRNA1	ENSG00000138435|ENST00000348749|CHRNA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	447.2734375	3	447.270984	1338.79112	2.7481	0.0012291	1.5625	0.00069887	4.3106	0.001928	447.2715969592816	107.28	1.0213	107.25	106.57	107.59	-0.034134					90	23	5	0	0	0	0.75779	1	11926	11926		20.315	0	1	9462500			61580	316	41121	41138	69724	69724					0.13527951222295087
VKFVLKHQNV	10	Unmodified	_VKFVLKHQNV_					0	0	0		ENSG00000009413|ENST00000368802|REV3L;nc|ENSG00000009413|O60673-2|REV3L	ENSG00000009413|ENST00000368802|REV3L	ENSG00000009413|ENST00000368802|REV3L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3703002929688	2	606.36659	1210.71863	2.2948	0.0013915	2.4855	0.0015071	4.7803	0.0028986	606.3679986963975	94.415	3.2479	94.356	93.249	96.497	-0.059212					198	76	3	0	0	0	0.86763	1	10063	10063		26.693	4.733	1	800340			61581	754	41122	41139	69725	69725					0.12169661939356047
VKFVQPKH	8	Unmodified	_VKFVQPKH_					0	0	0			REV__nc|ENSG00000142002|Q86TI2-4|DPP9	REV__nc|ENSG00000142002|Q86TI2-4|DPP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.795654296875	2	491.795269	981.575986	-0.71044	-0.00034939	1.6504	0.00081164	0.93993	0.00046225	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.86288	1	4225	4225		26.796	2.5934	1	571510	+		61582	19718	41123	41140	69726	69726					0.08446074267988024
VKFVQPKH	8	Unmodified	_VKFVQPKH_					0	0	0			REV__nc|ENSG00000142002|Q86TI2-4|DPP9	REV__nc|ENSG00000142002|Q86TI2-4|DPP9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7959289550781	2	491.795269	981.575986	-0.91317	-0.00044909	1.7019	0.00083701	0.78877	0.00038791	491.79595933805444	45.694	2.2667	46.589	46.327	48.594	0.89542					151	55	4	0	0	0	0.84341	1	4426	4426		24.203	1.1603	1	3110500	+		61583	19718	41123	41140	69727	69727					0.08446074267988024
VKGAFHQII	9	Unmodified	_VKGAFHQII_					0	0	0			REV__ENSG00000099331|ENST00000682292|MYO9B	REV__ENSG00000099331|ENST00000682292|MYO9B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80291748046875	2	506.800552	1011.58655	0.40005	0.00020275	1.1464	0.00058098	1.5464	0.00078372	506.80113102818973	55.116	1.0184	55.207	54.971	55.989	0.091167					54	31	2	0	0	0	0.76255	1	4693	4693		35.618	8.8222	1	154880	+		61584	17092	41124	41141	69728	69728					0.0812205692243424
VKGAHRSA	8	Unmodified	_VKGAHRSA_					0	0	0			REV__nc|ENSG00000197168|Q6P3R8|NEK5	REV__nc|ENSG00000197168|Q6P3R8|NEK5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2375183105469	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.87479	1	6872	6872		30.504	2.2494	1	1692300	+		61585	30134	41125	41142	69729	69729					0.04243184505901354
VKGAPRQN	8	Unmodified	_VKGAPRQN_					0	0	0			REV__ENST00000348513.10_1_17:38804250-38804298:-|nuORF	REV__ENST00000348513.10_1_17:38804250-38804298:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2528076171875	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.84341	1	7804	7804		24.203	2.5004	1	1788100	+		61586	25330	41126	41143	69730	69730					0.04839453677379879
VKGAPRQN	8	Unmodified	_VKGAPRQN_					0	0	0			REV__ENST00000348513.10_1_17:38804250-38804298:-|nuORF	REV__ENST00000348513.10_1_17:38804250-38804298:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2520446777344	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.85277	2	7381	7381;7893		33.516	3.0119	1	3322700	+		61587	25330	41126	41143	69731;69732	69731					0.04839453677379879
VKGAPRQN	8	Unmodified	_VKGAPRQN_					0	0	0			REV__ENST00000348513.10_1_17:38804250-38804298:-|nuORF	REV__ENST00000348513.10_1_17:38804250-38804298:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25341796875	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.85277	2	9431	9328;9431		31.955	1.2474	1	2020200	+		61588	25330	41126	41143	69733;69734	69734					0.04839453677379879
VKGCLLSGF	9	Unmodified	_VKGCLLSGF_					0	0	0		nc|ENSG00000158055|Q8TE85-3|GRHL3;ENSG00000158055|ENST00000361548|GRHL3;nc|ENSG00000158055|Q8TE85-2|GRHL3;nc|ENSG00000158055|Q8TE85|GRHL3;nc|ENSG00000158055|Q8TE85-4|GRHL3;ENST00000461318.1_1_1:24668655-24669644:+|nuORF	nc|ENSG00000158055|Q8TE85-3|GRHL3	nc|ENSG00000158055|Q8TE85-3|GRHL3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	461.2650146484375	2	462.254588	922.494624	0.59614	0.00027557	-3.9529	-0.0018273	-3.3568	-0.0015517	462.25276253807465	93.038	1.2547	93.084	92.582	93.837	0.045456					38	29	2	0	0	0	0.20789	1	9752	9752		20.947	3.4789	1	163360			61589	5459	41127	41144	69735	69735					0.030276305137363124
VKGFRIYG	8	Unmodified	_VKGFRIYG_					0	0	0		ENST00000524636.1_1_11:30516841-30557583:-|nuORF;ENST00000525519.1_1_11:30473620-30557628:-|nuORF;nc|ENSG00000066382|Q15777-2|MPPED2;ENSG00000066382|ENST00000358117|MPPED2	ENST00000524636.1_1_11:30516841-30557583:-|nuORF	ENST00000524636.1_1_11:30516841-30557583:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	470.27203369140625	2	470.27417	938.533787	-0.95275	-0.00044805	-3.504	-0.0016478	-4.4567	-0.0020959	470.2725133090264	92.093	2.8487	92.314	91.222	94.07	0.22157					155	67	4	0	0	0	0.86288	1	9331	9331		26.796	1.222	1	1872200			61590	1158	41128	41145	69736	69736					0.06206098859604481
VKGHLMKSI	9	Unmodified	_VKGHLMKSI_					0	0	0		ENST00000260731.4_1_10:94366146-94368792:+|nuORF	ENST00000260731.4_1_10:94366146-94368792:+|nuORF	ENST00000260731.4_1_10:94366146-94368792:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8026428222656	2	506.802237	1011.58992	-0.27575	-0.00013975	-1.4278	-0.00072361	-1.7035	-0.00086336	506.8014898895185	55.045	1.5212	55.019	54.561	56.082	-0.025955					67	42	2	0	0	0	0.78983	1	4995	4995		27.882	4.8398	1	166250			61591	9389	41129	41146	69737	69737					0.08458983704770162
VKGKHAKV	8	Unmodified	_VKGKHAKV_					0	0	0			REV__ENSG00000077943|ENST00000378076|ITGA8	REV__ENSG00000077943|ENST00000378076|ITGA8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77972412109375	2	433.782162	865.549771	0.74534	0.00032331	0.50034	0.00021704	1.2457	0.00054035	433.7809846177761	58.054	0.72464	58.088	57.796	58.521	0.033905					33	20	2	0	0	0	0.4196	1	5330	5330		3.9852	0	1	118420	+		61592	16755	41130	41147	69738	69738					0.11161805096503485
VKGKHAKV	8	Unmodified	_VKGKHAKV_					0	0	0			REV__ENSG00000077943|ENST00000378076|ITGA8	REV__ENSG00000077943|ENST00000378076|ITGA8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7793884277344	2	433.782162	865.549771	-0.60846	-0.00026394	-3.3616	-0.0014582	-3.9701	-0.0017222	433.78118218465625	46.62	1.441	47.544	46.988	48.429	0.92315					125	34	4	0	0	0	0.4196	1	4336	4336		7.6903	0	1	8636000	+		61593	16755	41130	41147	69739	69739					0.11161805096503485
VKGKHAKV	8	Unmodified	_VKGKHAKV_					0	0	0			REV__ENSG00000077943|ENST00000378076|ITGA8	REV__ENSG00000077943|ENST00000378076|ITGA8	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	433.782162	865.549771	-0.9752	-0.00042303	-3.4221	-0.0014844	-4.3973	-0.0019075	433.7814372830721	46.876	1.2989	47.348	46.897	48.196	0.47139	-0.097864	-3.0607E-05	NaN	7.6903	125	31	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5911700	+		61594	16755	41130	41147							0.11161805096503485
VKGKIGQP	8	Unmodified	_VKGKIGQP_					0	0	0			REV__ENSG00000081052|ENST00000396625|COL4A4	REV__ENSG00000081052|ENST00000396625|COL4A4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2686767578125	2	413.760895	825.507237	-1.9019	-0.00078695	-2.1186	-0.00087659	-4.0205	-0.0016635	413.76186168629437	39.948	0.43897	39.955	39.675	40.114	0.0065002					13	10	2	0	0	0	0.4196	1	2467	2467		17.365	0	1	36268	+		61595	16816	41131	41148	69740	69740					0.08750409968286021
VKGKKKGK	8	Unmodified	_VKGKKKGK_					0	0	0			REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.77471923828125	2	436.805637	871.596721	1.439	0.00062858	-3.7072	-0.0016193	-2.2682	-0.00099076	436.8040502918672	91.057	0.19751	90.99	90.918	91.116	-0.067085					5	4	2	0	0	0	0.4196	1	9587	9587		1.3276	0	1	29868	+		61596	19119	41132	41149	69741	69741					0.15578664647659934
VKGKKKGK	8	Unmodified	_VKGKKKGK_					0	0	0			REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	REV__nc|ENSG00000134160|Q7Z4N2-2|TRPM1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	436.805637	871.596721	-0.1624	-7.0937E-05	-5.7213	-0.0024991	-5.8837	-0.00257	436.8021394341395	91.001	0.43361	91.07	90.723	91.157	0.069328	0.040037	-0.00010209	NaN	1.3276	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59908	+		61597	19119	41132	41149							0.15578664647659934
VKGKLTQLA	9	Unmodified	_VKGKLTQLA_					0	0	0			REV__ENST00000487070.5_1_2:97281260-97297069:-|nuORF	REV__ENST00000487070.5_1_2:97281260-97297069:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.3088684082031	2	479.30821	956.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.71	1	50.759	50.259	51.259	0.049896								0	0	0	0.30053	1	4001	4001		30.504	0	1		+		61598	27569	41133	41150	69742	69742					0.12182923719603878
VKGLELPL	8	Unmodified	_VKGLELPL_					0	0	0			REV__ENST00000489071.5_1_20:34135089-34136623:+|nuORF	REV__ENST00000489071.5_1_20:34135089-34136623:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7786560058594	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.723	1	67.687	67.187	68.187	-0.035698								0	0	0	0.29816	1	6509	6509		38.806	0	1		+		61599	27612	41134	41151	69743	69743					0.10388447425293634
VKGLELPL	8	Unmodified	_VKGLELPL_					0	0	0			REV__ENST00000489071.5_1_20:34135089-34136623:+|nuORF	REV__ENST00000489071.5_1_20:34135089-34136623:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77996826171875	2	434.778754	867.542954	0.15311	6.6568E-05	3.0229	0.0013143	3.176	0.0013809	434.7799826029187	37.007	1.7817	37.018	36.075	37.857	0.011173					164	39	5	0	0	0	0.80706	2	2532	2519;2532		37.028	1.8278	1	5259900	+		61600	27612	41134	41151	69744;69745	69745					0.10388447425293634
VKGLELPL	8	Unmodified	_VKGLELPL_					0	0	0			REV__ENST00000489071.5_1_20:34135089-34136623:+|nuORF	REV__ENST00000489071.5_1_20:34135089-34136623:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.78009033203125	2	434.778754	867.542954	0.17139	7.4517E-05	3.201	0.0013917	3.3724	0.0014663	434.7800235008866	37.854	1.477	37.948	37.639	39.116	0.094318					162	48	4	0	0	0	0.80706	1	2317	2317		19.36	0	1	2203700	+		61601	27612	41134	41151	69746	69746					0.10388447425293634
VKGLELPL	8	Unmodified	_VKGLELPL_					0	0	0			REV__ENST00000489071.5_1_20:34135089-34136623:+|nuORF	REV__ENST00000489071.5_1_20:34135089-34136623:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7785339355469	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.84341	1	3318	3318		24.203	0	1	1327200	+		61602	27612	41134	41151	69747	69747					0.10388447425293634
VKGLELPL	8	Unmodified	_VKGLELPL_					0	0	0			REV__ENST00000489071.5_1_20:34135089-34136623:+|nuORF	REV__ENST00000489071.5_1_20:34135089-34136623:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7794189453125	2	434.778754	867.542954	-0.29603	-0.00012871	3.1388	0.0013647	2.8428	0.001236	434.77998100939635	44.91	1.6932	44.842	44.077	45.77	-0.068634					139	41	4	0	0	0	0.79929	1	3323	3323		18.324	0	1	1190800	+		61603	27612	41134	41151	69748	69748					0.10388447425293634
VKGLGLIL	8	Unmodified	_VKGLGLIL_					0	0	0		nc|ENSG00000204967|Q9UN74-2|PCDHA4;chr5:140809572-140817231|43|11.05|0.0|20.08|+|ENST00000672575|PCDHA4,PCDHA4;ENSG00000204967|ENST00000530339|PCDHA4	nc|ENSG00000204967|Q9UN74-2|PCDHA4	nc|ENSG00000204967|Q9UN74-2|PCDHA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78533935546875	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.82419	2	1702	1702;1711		21.702	7.0382	1	1606100			61604	442	41135	41152	69749;69750	69749					0.13981055150509292
VKGLGLIL	8	Unmodified	_VKGLGLIL_					0	0	0		nc|ENSG00000204967|Q9UN74-2|PCDHA4;chr5:140809572-140817231|43|11.05|0.0|20.08|+|ENST00000672575|PCDHA4,PCDHA4;ENSG00000204967|ENST00000530339|PCDHA4	nc|ENSG00000204967|Q9UN74-2|PCDHA4	nc|ENSG00000204967|Q9UN74-2|PCDHA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7852783203125	2	406.783839	811.553125	-0.45573	-0.00018539	4.0823	0.0016606	3.6266	0.0014752	406.7853476026277	33.431	0.94502	33.374	32.967	33.912	-0.056385					79	22	4	0	0	0	0.86288	1	2079	2079		26.796	6.3143	1	606440			61605	442	41135	41152	69751	69751					0.13981055150509292
VKGLGLIL	8	Unmodified	_VKGLGLIL_					0	0	0		nc|ENSG00000204967|Q9UN74-2|PCDHA4;chr5:140809572-140817231|43|11.05|0.0|20.08|+|ENST00000672575|PCDHA4,PCDHA4;ENSG00000204967|ENST00000530339|PCDHA4	nc|ENSG00000204967|Q9UN74-2|PCDHA4	nc|ENSG00000204967|Q9UN74-2|PCDHA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852783203125	2	406.783839	811.553125	2.7329	0.0011117	1.0571	0.00043001	3.79	0.0015417	406.7841375125675	29.651	1.9122	29.636	28.895	30.807	-0.015167					147	57	4	0	0	0	0.86288	1	1538	1538		26.796	5.0938	1	914260			61606	442	41135	41152	69752	69752					0.13981055150509292
VKGLGLIL	8	Unmodified	_VKGLGLIL_					0	0	0		nc|ENSG00000204967|Q9UN74-2|PCDHA4;chr5:140809572-140817231|43|11.05|0.0|20.08|+|ENST00000672575|PCDHA4,PCDHA4;ENSG00000204967|ENST00000530339|PCDHA4	nc|ENSG00000204967|Q9UN74-2|PCDHA4	nc|ENSG00000204967|Q9UN74-2|PCDHA4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78521728515625	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.425	1	32.537	32.037	33.037	0.11117								0	0	0	0.30125	1	1524	1524		20.482	0	1				61607	442	41135	41152	69753	69753					0.13981055150509292
VKGLGLIL	8	Unmodified	_VKGLGLIL_					0	0	0		nc|ENSG00000204967|Q9UN74-2|PCDHA4;chr5:140809572-140817231|43|11.05|0.0|20.08|+|ENST00000672575|PCDHA4,PCDHA4;ENSG00000204967|ENST00000530339|PCDHA4	nc|ENSG00000204967|Q9UN74-2|PCDHA4	nc|ENSG00000204967|Q9UN74-2|PCDHA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7862548828125	2	406.783839	811.553125	0.022938	9.3307E-06	3.6731	0.0014942	3.696	0.0015035	406.7851827724374	33.215	0.93484	33.182	32.78	33.715	-0.032677					97	42	3	0	0	0	0.86288	1	1653	1653		26.796	3.7594	1	368720			61608	442	41135	41152	69754	69754					0.13981055150509292
VKGLGPKSFQQ	11	Unmodified	_VKGLGPKSFQQ_					0	0	0		ENSG00000068784|ENST00000263736|SRBD1;nc|ENSG00000068784|Q8N5C6-2|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	594.8388671875	2	594.840405	1187.66626	-1.8463	-0.0010983	-2.1096	-0.0012549	-3.9559	-0.0023531	594.8391183402547	69.554	0.6607	69.59	69.382	70.042	0.035614					50	33	2	0	0	0	0.73893	1	6647	6647		24.519	0.99649	1	1808800			61609	1207	41136	41153	69755	69755					0.07993078805770892
VKGLIEPI	8	Unmodified	_VKGLIEPI_					0	0	0			REV__ENST00000462138.5_1_3:53259639-53259759:-|nuORF	REV__ENST00000462138.5_1_3:53259639-53259759:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7792053222656	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.84341	1	1951	1951		24.203	2.5004	1	4737100	+		61610	27045	41137	41154	69756	69756					0.10388447425270897
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78533935546875	2	406.783839	811.553125	0.20394	8.2959E-05	3.6434	0.0014821	3.8473	0.001565	406.7851787446003	29.647	1.7935	29.678	29.075	30.869	0.030947					149	52	4	0	0	0	0.81548	3	1514	1459;1466;1514		28.254	6.5519	1	789640			61611	7990	41138	41155	69757;69758;69759	69759					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852783203125	2	406.783839	811.553125	-0.12701	-5.1665E-05	4.0102	0.0016313	3.8832	0.0015796	406.7853480704683	34.439	1.4356	34.434	33.818	35.254	-0.0047417					125	35	4	0	0	0	0.81548	1	2092	2092		20.482	0	1	1552500			61612	7990	41138	41155	69760	69760					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.78521728515625	2	406.783839	811.553125	-0.12228	-4.9742E-05	4.0703	0.0016557	3.948	0.001606	406.7853695051589	35.638	4.6571	35.626	35.208	39.865	-0.012199					169	106	4	0	0	0	0.85277	3	2247	2189;2235;2247		28.254	6.5519	1	683900			61613	7990	41138	41155	69761;69762;69763	69763					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853088378906	2	406.783839	811.553125	-0.34246	-0.00013931	4.1924	0.0017054	3.85	0.0015661	406.78540084150717	29.66	1.7951	29.616	28.901	30.696	-0.043095					140	52	4	0	0	0	0.81548	2	1580	1551;1580		28.254	5.8177	1	985720			61614	7990	41138	41155	69764;69765	69765					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.78509521484375	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.82419	2	1745	1745;1832		26.796	6.3143	1	1953100			61615	7990	41138	41155	69766;69767	69766					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78521728515625	2	406.783839	811.553125	2.7329	0.0011117	1.0571	0.00043001	3.79	0.0015417	406.7841375125675	29.651	1.9122	29.636	28.895	30.807	-0.015167					147	57	4	0	0	0	0.81548	1	1494	1494		20.482	4.8456	1	914260			61616	7990	41138	41155	69768	69768					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7852478027344	2	406.783839	811.553125	1.2307	0.00050062	2.609	0.0010613	3.8397	0.0015619	406.7847800610387	35.56	4.0123	35.569	35.212	39.224	0.0092812					187	90	4	0	0	0	0.81548	4	2246	2211;2235;2246;2258		28.254	7.0382	1	403450			61617	7990	41138	41155	69769;69770;69771;69772	69771					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78515625	2	406.783839	811.553125	0.090146	3.667E-05	3.6722	0.0014938	3.7623	0.0015304	406.7851872479594	29.275	1.507	29.387	29.011	30.518	0.11225					201	75	4	0	0	0	0.81548	3	1235	1235;1249;1255		20.482	4.8456	1	1410200			61618	7990	41138	41155	69773;69774;69775	69773					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7845764160156	2	406.783839	811.553125	0.13435	5.4653E-05	3.6403	0.0014808	3.7747	0.0015355	406.7851750702729	34.158	1.3775	34.266	33.796	35.173	0.10829					195	61	4	0	0	0	0.86791	1	1788	1788		28.254	6.5519	1	1756100			61619	7990	41138	41155	69776	69776					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2955627441406	2	406.783839	811.553125	0.16424	6.6811E-05	3.6337	0.0014781	3.798	0.0015449	406.7851684264354	37.511	0.44434	37.611	37.485	37.929	0.099277					24	16	2	0	0	0	0.4196	1	2166	2166		8.8223	0	1	38785			61620	7990	41138	41155	69777	69777					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852478027344	2	406.783839	811.553125	0.15336	6.2386E-05	3.5765	0.0014549	3.7298	0.0015172	406.78515087104677	29.491	1.6154	29.502	28.963	30.578	0.011229					194	79	4	0	0	0	0.80706	4	1261	1247;1253;1261;1266		28.254	7.7724	1	1286900			61621	7990	41138	41155	69778;69779;69780;69781	69780					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78521728515625	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.81548	1	1449	1449		20.482	0	1	1817700			61622	7990	41138	41155	69782	69782					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7850646972656	2	406.783839	811.553125	-0.018697	-7.6058E-06	3.7827	0.0015388	3.764	0.0015311	406.78522096184815	34.248	1.4374	34.203	33.675	35.112	-0.045815					167	62	4	0	0	0	0.81548	2	1734	1734;1793		21.702	5.8177	1	1879900			61623	7990	41138	41155	69783;69784	69783					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78424072265625	2	406.783839	811.553125	-0.059143	-2.4059E-05	3.8477	0.0015652	3.7885	0.0015411	406.78528338513706	35.439	0.98428	35.378	35.066	36.05	-0.060333					48	30	2	0	0	0	0.86288	1	1846	1846		26.796	6.3143	1	346370			61624	7990	41138	41155	69785	69785					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7852478027344	2	406.783839	811.553125	0.13384	5.4446E-05	3.7055	0.0015073	3.8393	0.0015618	406.7852062914835	29.439	1.7033	29.41	28.91	30.613	-0.029207					106	38	4	0	0	0	0.86288	2	1850	1850;1899		37.028	15.326	1	2367100			61625	7990	41138	41155	69786;69787	69786					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78460693359375	2	406.783839	811.553125	0.56827	0.00023116	3.0171	0.0012273	3.5854	0.0014585	406.78493901596437	31.598	1.6437	31.678	30.856	32.5	0.079834					110	37	4	0	0	0	0.82419	2	2257	2185;2257		21.702	0	1	5409400			61626	7990	41138	41155	69788;69789	69789					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.7853698730469	2	406.783839	811.553125	0.30634	0.00012461	3.4308	0.0013956	3.7371	0.0015202	406.7851080123586	29.615	1.556	29.525	28.974	30.53	-0.089546					92	35	4	0	0	0	0.81548	3	1885	1885;1897;1909		28.254	6.5519	1	1963500			61627	7990	41138	41155	69790;69791;69792	69790					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78509521484375	2	406.783839	811.553125	0.34779	0.00014148	3.2583	0.0013254	3.6061	0.0014669	406.7850428339316	31.533	1.6322	31.64	30.856	32.488	0.10707					116	37	4	0	0	0	0.81548	1	2127	2127		20.482	5.8177	1	5012000			61628	7990	41138	41155	69793	69793					0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	406.783839	811.553125	-2.0306	-0.00082603	5.8179	0.0023666	3.7872	0.0015406	406.786064147994	29.747	1.4973	29.747	29.293	30.791	0	0.16398	0.0014977	NaN	28.254	167	55	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1562800			61629	7990	41138	41155							0.13981055150509292
VKGLLGLL	8	Unmodified	_VKGLLGLL_					0	0	0		ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	ENSG00000189129|ENST00000372263|PLAC9	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.783839	811.553125	-1.9218	-0.00078177	5.6772	0.0023094	3.7554	0.0015276	406.7860061927284	29.678	1.4253	29.745	29.28	30.705	0.066727	0.16154	0.0013832	NaN	28.254	186	66	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1307400			61630	7990	41138	41155							0.13981055150509292
VKGLQNDPE	9	Unmodified	_VKGLQNDPE_					0	0	0		ENSG00000275520|ENST00000611003|FAM236A;ENSG00000268994|ENST00000596535|FAM236B	ENSG00000275520|ENST00000611003|FAM236A	ENSG00000275520|ENST00000611003|FAM236A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	499.3113708496094	2	500.258914	998.503274	0.8446	0.00042252	-1.5835	-0.00079214	-0.73886	-0.00036962	500.25971909539834	32.381	0.30177	32.488	32.36	32.662	0.10707					8	6	2	0	0	0	0.20789	1	2289	2289		27.882	0	1	36813			61631	8965	41139	41156	69794	69794					0.0039627568389732915
VKGLSFHPK	9	Unmodified	_VKGLSFHPK_					0	0	0		ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA;ENST00000541366.1_1_1:160303391-160312960:-|nuORF	ENSG00000122218|ENST00000241704|COPA	ENSG00000122218|ENST00000241704|COPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8007507324219	2	506.800552	1011.58655	-0.1225	-6.2083E-05	1.1991	0.00060769	1.0766	0.00054561	506.8011249172422	46.216	2.1586	46.137	45.418	47.576	-0.079006					85	63	2	0	0	0	0.76764	1	3300	3300		34.173	7.3764	1	271040			61632	3214	41140	41157	69795	69795					0.08122056922422871
VKGLTVLVHR	10	Unmodified	_VKGLTVLVHR_					0	0	0			REV__ENST00000548725.5_1_12:56552185-56553955:+|nuORF	REV__ENST00000548725.5_1_12:56552185-56553955:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3641967773438	2	561.361308	1120.70806	-1.1522	-0.00064679	4.3288	0.00243	3.1766	0.0017832	561.3636203796618	43.91	1.2503	44.684	44.223	45.473	0.7738					84	30	4	0	0	0	0.85251	1	4067	4067		19.997	0	1	1618600	+		61633	28577	41141	41158	69796	69796					0.15253679284933241
VKGPGISKFV	10	Unmodified	_VKGPGISKFV_					0	0	0		ENST00000490659.5_1_10:97583001-97604470:+|nuORF;ENST00000371206.6_1_10:97583001-97605437:+|nuORF;nc|ENSG00000138185|P49961-3|ENTPD1;ENSG00000138185|ENST00000371205|ENTPD1;nc|ENSG00000138185|P49961-2|ENTPD1;nc|ENSG00000138185|P49961-6|ENTPD1	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.316162109375	2	516.316035	1030.61752	-0.63969	-0.00033028	-3.0425	-0.0015709	-3.6822	-0.0019012	516.3144152653146	102.55	1.0925	102.55	101.98	103.08	0					67	27	3	0	0	0	0.8651	1	10541	10541		25.574	1.3713	1	640710			61634	4281	41142	41159	69797	69797					0.10343210236646883
VKGPPPVW	8	Unmodified	_VKGPPPVW_					0	0	0			REV__ENST00000377211.8_1_13:78492712-78493610:-|nuORF	REV__ENST00000377211.8_1_13:78492712-78493610:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.2545166015625	2	440.257988	878.501424	-1.4867	-0.00065454	-4.4625	-0.0019647	-5.9492	-0.0026192	440.2558792148897	67.228	0.84634	67.361	67.023	67.869	0.13326					70	34	3	0	0	0	0.89457	1	5973	5973		37.028	3.5129	1	457950	+		61635	25861	41143	41160	69798	69798					0.057313114566113654
VKGPVPLP	8	Unmodified	_VKGPVPLP_					0	0	0			REV__ENST00000311601.5_1_5:171764580-171764949:-|nuORF	REV__ENST00000311601.5_1_5:171764580-171764949:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.5909423828125	2	403.760364	805.506175	-1.9389	-0.00078284	0.0080923	3.2674E-06	-1.9308	-0.00077958	403.76120590524766	16.138	0.17172	16.186	16.053	16.225	0.047804					10	7	2	0	0	0	0.4196	1	125	125		4.6817	0	1	24330	+		61636	24908	41144	41161	69799	69799					0.0956419559937558
VKGRIKRK	8	Unmodified	_VKGRIKRK_					0	0	0			REV__ENST00000430298.6_1_19:12222347-12224207:+|nuORF	REV__ENST00000430298.6_1_19:12222347-12224207:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	492.8462219238281	2	492.843085	983.671617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.68	1	113.68	113.18	114.18	0								0	0	0	0.31173	1	11739	11739		8.2313	0	1		+		61637	26599	41145	41162	69800	69800					0.1791284717888857
VKGRQTPKHI	10	Unmodified	_VKGRQTPKHI_					0	0	0		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3538818359375	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.86471	1	10645	10645		30.318	1.1477	1	61091000			61638	4382	41146	41163	69801	69801					0.11863607136797327
VKGRQTPKHI	10	Unmodified	_VKGRQTPKHI_					0	0	0		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.353515625	2	582.354014	1162.69348	-0.84093	-0.00048972	-0.12395	-7.2182E-05	-0.96488	-0.0005619	582.3538485313621	103.61	3.9625	103.61	103.11	107.07	-0.0035782					384	94	6	0	0	0	0.86471	5	11121	11109;11121;11169;11181;11217		30.318	2.4355	1	77752000			61639	4382	41146	41163	69802;69803;69804;69805;69806	69803					0.11863607136797327
VKGRQTPKHI	10	Unmodified	_VKGRQTPKHI_					0	0	0		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3539428710938	2	582.354014	1162.69348	3.1803	0.0018521	-4.2471	-0.0024733	-1.0667	-0.00062122	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.86218	3	11513	11342;11390;11513		32.812	2.4947	1	77008000			61640	4382	41146	41163	69807;69808;69809	69809					0.11863607136797327
VKGRQTPKHI	10	Unmodified	_VKGRQTPKHI_					0	0	0		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3536987304688	2	582.354014	1162.69348	0.15817	9.2113E-05	-1.1126	-0.00064794	-0.95444	-0.00055582	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.86272	2	11377	11256;11377		30.318	2.4355	1	78004000			61641	4382	41146	41163	69810;69811	69811					0.11863607136797327
VKGRQTPKHI	10	Unmodified	_VKGRQTPKHI_					0	0	0		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3534545898438	2	582.354014	1162.69348	0.1583	9.2184E-05	-0.70263	-0.00040918	-0.54433	-0.00031699	582.3534714256248	107.11	1.1934	107.15	106.63	107.82	0.035622					78	27	4	0	0	0	0.8651	1	11805	11805		25.574	0	1	791140			61642	4382	41146	41163	69812	69812					0.11863607136797327
VKGRQTPKHI	10	Unmodified	_VKGRQTPKHI_					0	0	0		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3538818359375	2	582.354014	1162.69348	0.72245	0.00042072	-1.6748	-0.00097534	-0.95238	-0.00055462	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.82886	5	11103	10908;10944;11042;11079;11103		37.812	4.8343	1	132960000			61643	4382	41146	41163	69813;69814;69815;69816;69817	69817					0.11863607136797327
VKGRQTPKHI	10	Unmodified	_VKGRQTPKHI_					0	0	0		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.354248046875	2	582.354014	1162.69348	0.88325	0.00051437	-1.8039	-0.0010505	-0.92067	-0.00053616	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.82886	3	10954	10930;10954;11002		37.812	6.0394	1	125340000			61644	4382	41146	41163	69818;69819;69820	69819					0.11863607136797327
VKGRQTPKHI	10	Unmodified	_VKGRQTPKHI_					0	0	0		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3536987304688	2	582.354014	1162.69348	-1.3468	-0.00078429	0.41376	0.00024096	-0.93299	-0.00054333	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.8545	6	10931	10895;10931;10942;10964;10976;11039		36.447	5.9431	1	120000000			61645	4382	41146	41163	69821;69822;69823;69824;69825;69826	69822					0.11863607136797327
VKGRQTPKHI	10	Unmodified	_VKGRQTPKHI_					0	0	0		ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	ENSG00000139618|ENST00000380152|BRCA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.3534545898438	2	582.354014	1162.69348	2.7406	0.001596	-3.1524	-0.0018358	-0.4118	-0.00023981	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.76096	1	12775	12775		41.427	8.6142	1	7862700			61646	4382	41146	41163	69827	69827					0.11863607136797327
VKGSSHVR	8	Unmodified	_VKGSSHVR_					0	0	0		ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25189208984375	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.86288	1	9134	9134		26.796	0	1	2020200			61647	8653	41147	41164	69828	69828					0.04839453677379879
VKGTLVTKCR	10	Unmodified	_VKGTLVTKCR_					0	0	0			REV__ENSG00000062822|ENST00000440232|POLD1	REV__ENSG00000062822|ENST00000440232|POLD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.3342895507812	2	552.831526	1103.6485	0.70437	0.0003894	3.5561	0.0019659	4.2605	0.0023553	552.8335720406732	83.834	1.6836	83.982	83.396	85.079	0.14789					58	38	2	0	0	0	0.85692	1	8219	8219		36.318	14.358	1	196450	+		61648	16465	41148	41165	69829	69829					0.10082040279257853
VKGVAAYL	8	Unmodified	_VKGVAAYL_					0	0	0			REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	410.91607666015625	2	410.749996	819.485439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.484	1	16.544	16.044	17.044	0.059269								0	0	0	0.29631	1	154	154		25.45	3.7478	1		+		61649	23119	41149	41166	69830	69830					0.06847605219684283
VKGVIWRA	8	Unmodified	_VKGVIWRA_					0	0	0			REV__chr7:55952276-55953179|63|40.3|0.84|5.59|+|ENST00000443449|MRPS17,MRPS17	REV__chr7:55952276-55953179|63|40.3|0.84|5.59|+|ENST00000443449|MRPS17,MRPS17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.790771484375	2	464.789987	927.565421	-1.14	-0.00052988	2.7044	0.001257	1.5644	0.00072712	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.87922	1	1808	1808		31.955	11.473	1	286820	+		61650	15908	41150	41167	69831	69831					0.09874091613551172
VKGVKGLEIRP	11	Unmodified	_VKGVKGLEIRP_					0	0	0			REV__ENST00000514823.5_1_4:124585681-124585771:+|nuORF	REV__ENST00000514823.5_1_4:124585681-124585771:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	598.381103515625	2	598.379697	1194.74484	0.35601	0.00021303	2.8174	0.0016859	3.1735	0.0018989	598.3813089320432	40.572	1.0575	40.654	40.231	41.288	0.081345					56	37	2	0	0	0	0.75164	1	2579	2579		21.686	5.2126	1	302330	+		61651	28021	41151	41168	69832	69832					0.15525931110823876
VKGWPNRL	8	Unmodified	_VKGWPNRL_					0	0	0			REV__nc|ENSG00000214711|A8MX76-2|CAPN14	REV__nc|ENSG00000214711|A8MX76-2|CAPN14	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2857971191406	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.013	1	58.124	57.624	58.624	0.11027								0	0	0	0.2946	1	4931	4931		52.299	13.493	1		+		61652	23661	41152	41169	69833	69833					0.07004903608185487
VKHELLICTLV	11	Unmodified	_VKHELLICTLV_					0	0	0			REV__nc|ENSG00000110514|Q8WXG6-6|MADD	REV__nc|ENSG00000110514|Q8WXG6-6|MADD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3766479492188	2	634.375766	1266.73698	1.3144	0.00083382	0.13665	8.6685E-05	1.451	0.0009205	634.3758415759962	112.23	0.14008	112.26	112.22	112.36	0.028854					7	4	2	0	0	0	0.76699	1	12271	12271		18.262	0	1	791380	+		61653	17820	41153	41170	69834	69834					0.11428035799076497
VKHLSNKKER	10	Unmodified	_VKHLSNKKER_					0	0	0		nc|ENSG00000137757|P51878-4|CASP5	nc|ENSG00000137757|P51878-4|CASP5	nc|ENSG00000137757|P51878-4|CASP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8687133789062	2	619.870028	1237.7255	0.5439	0.00033715	-1.617	-0.0010023	-1.0731	-0.00066519	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.86047	1	11167	11167		23.523	0.48021	1	1280900			61654	14945	41154	41171	69835	69835					0.11614974819917734
VKHPLGPG	8	Unmodified	_VKHPLGPG_					0	0	0		ENST00000511325.1_1_3:128623240-128628375:+|nuORF	ENST00000511325.1_1_3:128623240-128628375:+|nuORF	ENST00000511325.1_1_3:128623240-128628375:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.7400817871094	2	402.739963	803.465373	1.1618	0.00046791	-0.80525	-0.00032431	0.35656	0.0001436	402.7391961988466	34.816	1.4181	35.197	34.934	36.353	0.3812					85	36	4	0	0	0	0.88915	1	2662	2662		35.201	6.9464	1	876330			61655	13016	41155	41172	69836	69836					0.05577854279761141
VKHPLQKY	8	Unmodified	_VKHPLQKY_					0	0	0		ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80023193359375	2	506.800552	1011.58655	0.30541	0.00015478	0.71646	0.0003631	1.0219	0.00051789	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.85277	1	3142	3142		25.45	1.2474	1	412810			61656	8030	41156	41173	69837	69837					0.08122056922411502
VKIAQDPKKLR	11	Unmodified	_VKIAQDPKKLR_					0	0	0			REV__ENST00000463995.5_1_3:49713127-49713790:+|nuORF	REV__ENST00000463995.5_1_3:49713127-49713790:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.2555847167969	3	432.610111	1294.8085	2.4095	0.0010424	-3.5565	-0.0015386	-1.147	-0.00049622	432.60875336065914	107.05	0.9082	107.08	106.24	107.15	0.035736					26	20	2	0	0	0	0.17273	1	11747	11747		17.833	0	1	119790	+		61657	27084	41157	41174	69838	69838					0.17289291547899666
VKIARALV	8	Unmodified	_VKIARALV_					0	0	0		nc|ENSG00000149476|Q3LXA3-2|TKFC;ENSG00000149476|ENST00000394900|TKFC	nc|ENSG00000149476|Q3LXA3-2|TKFC	nc|ENSG00000149476|Q3LXA3-2|TKFC	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3006896972656	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.85277	1	6369	6369		25.45	4.9683	1	1072400			61658	5028	41158	41175	69839	69839					0.14627262273347696
VKIARALV	8	Unmodified	_VKIARALV_					0	0	0		nc|ENSG00000149476|Q3LXA3-2|TKFC;ENSG00000149476|ENST00000394900|TKFC	nc|ENSG00000149476|Q3LXA3-2|TKFC	nc|ENSG00000149476|Q3LXA3-2|TKFC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30023193359375	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.86294	1	6948	6948		8.8223	0	1	1921500			61659	5028	41158	41175	69840	69840					0.14627262273347696
VKIEIPLG	8	Unmodified	_VKIEIPLG_					0	0	0			REV__ENSG00000067704|ENST00000366922|IARS2	REV__ENSG00000067704|ENST00000366922|IARS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7801513671875	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.86791	1	3242	3242		28.254	0	1	17256000	+		61660	16547	41159	41176	69841	69841					0.10388447425282266
VKIEIPLG	8	Unmodified	_VKIEIPLG_					0	0	0			REV__ENSG00000067704|ENST00000366922|IARS2	REV__ENSG00000067704|ENST00000366922|IARS2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7796630859375	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.059	1	64.614	64.114	65.114	0.5545								0	0	0	0.29353	1	6931	6931		28.254	1.4582	1		+		61661	16547	41159	41176	69842	69842					0.10388447425282266
VKIEPIPG	8	Unmodified	_VKIEPIPG_					0	0	0		ENSG00000158417|ENST00000289371|EIF5B;ENST00000494190.1_1_2:100013292-100015462:+|nuORF	ENSG00000158417|ENST00000289371|EIF5B	ENSG00000158417|ENST00000289371|EIF5B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	427.30267333984375	2	426.763104	851.511654	-0.18254	-7.7899E-05	3.0014	0.0012809	2.8189	0.001203	426.76456745291574	71.299	0.77261	71.333	70.925	71.697	0.034004					46	36	2	0	0	0	0.4196	1	6711	6711		35.618	0	1	67528			61662	5475	41160	41177	69843	69843					0.07995874391178859
VKIFRAEINA	10	Unmodified	_VKIFRAEINA_					0	0	0		nc|ENSG00000168778|Q96GX1-2|TCTN2;ENSG00000168778|ENST00000303372|TCTN2	nc|ENSG00000168778|Q96GX1-2|TCTN2	nc|ENSG00000168778|Q96GX1-2|TCTN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.8400268554688	2	580.842948	1159.67134	-0.43283	-0.00025141	-3.7117	-0.0021559	-4.1445	-0.0024073	580.8405993802119	69.859	0.92783	69.822	69.57	70.498	-0.036957					124	48	3	0	0	0	0.86272	1	6778	6778		24.519	1.4767	1	18374000			61663	6434	41161	41178	69844	69844					0.09789382668395774
VKIGIILG	8	Unmodified	_VKIGIILG_					0	0	0		chr14:68154663-68291884|14|11.57|0.05|7.93|+|0|TE_info:L1MEc,L1MEc_dup15126,L1,LINE,donor,-,68154024,68154663|None,RAD51B|9	chr14:68154663-68291884|14|11.57|0.05|7.93|+|0|TE_info:L1MEc,L1MEc_dup15126,L1,LINE,donor,-,68154024,68154663|None,RAD51B|9	chr14:68154663-68291884|14|11.57|0.05|7.93|+|0|TE_info:L1MEc,L1MEc_dup15126,L1,LINE,donor,-,68154024,68154663|None,RAD51B|9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852478027344	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.82464	1	1473	1473		21.702	0	1	1817700			61664	174	41162	41179	69845	69845					0.1398105515052066
VKIILPEG	8	Unmodified	_VKIILPEG_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7796630859375	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.89962	1	2739	2739		38.806	3.6054	1	2581600			61665	5880	41163	41180	69846	69846					0.10388447425282266
VKIILPEG	8	Unmodified	_VKIILPEG_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7799377441406	2	434.778754	867.542954	-1.8344	-0.00079754	4.3253	0.0018805	2.4909	0.001083	434.7805085345101	43.07	1.706	43.07	42.535	44.241	0					126	41	4	0	0	0	0.81548	1	2980	2980		20.482	0	1	2514600			61666	5880	41163	41180	69847	69847					0.10388447425282266
VKIILPEG	8	Unmodified	_VKIILPEG_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7797546386719	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.88915	1	3760	3760		35.201	0	1	2017500			61667	5880	41163	41180	69848	69848					0.10388447425282266
VKIILPEG	8	Unmodified	_VKIILPEG_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78021240234375	2	434.778754	867.542954	-0.72462	-0.00031505	3.8898	0.0016912	3.1652	0.0013761	434.78037611122505	35.149	1.2526	35.093	34.81	36.063	-0.056381					100	28	4	0	0	0	0.87922	1	2285	2285		31.955	2.1133	1	2671400			61668	5880	41163	41180	69849	69849					0.10388447425282266
VKIILPEG	8	Unmodified	_VKIILPEG_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801208496094	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.86288	1	3944	3944		26.796	1.3459	1	2468400			61669	5880	41163	41180	69850	69850					0.10388447425282266
VKIILPEG	8	Unmodified	_VKIILPEG_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7799072265625	2	434.778754	867.542954	1.3776	0.00059897	1.1215	0.0004876	2.4991	0.0010866	434.7791184687597	46.776	1.6866	46.772	46.112	47.798	-0.0041618					148	47	4	0	0	0	0.87479	1	3803	3803		30.504	0.6621	1	2109000			61670	5880	41163	41180	69851	69851					0.10388447425282266
VKIILPEG	8	Unmodified	_VKIILPEG_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77935791015625	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.81548	1	3574	3574		20.482	1.1219	1	1959200			61671	5880	41163	41180	69852	69852					0.10388447425282266
VKIILPEG	8	Unmodified	_VKIILPEG_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.90465	1	2223	2223		40.573	5.3719	1	2486400			61672	5880	41163	41180	69853	69853					0.10388447425282266
VKILDKMIKH	10	Unmodified	_VKILDKMIKH_					0	0	0			REV__ENSG00000183578|ENST00000637513|TNFAIP8L3	REV__ENSG00000183578|ENST00000637513|TNFAIP8L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	408.9220886230469	3	408.921409	1223.7424	-0.18603	-7.607E-05	2.3833	0.00097456	2.1972	0.00089849	408.9223182552884	104.73	3.6152	104.72	103.66	107.27	-0.014809					241	85	5	0	0	0	0.85466	1	11321	11321		20.03	0.7678	1	2991100	+		61673	22614	41164	41181	69854	69854					0.13947759381517244
VKILIVPS	8	Unmodified	_VKILIVPS_					0	0	0			REV__nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	REV__nc|ENSG00000112297|Q9Y4K1-1|CRYBG1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801513671875	2	434.796946	867.57934	-0.62979	-0.00027383	2.5186	0.0010951	1.8888	0.00082123	434.7981712117747	34.588	0.62626	34.531	34.262	34.889	-0.056385					18	13	2	0	0	0	0.4196	1	2162	2162		30.504	0.6621	1	20058	+		61674	17938	41165	41182	69855	69855					0.14025324321983135
VKILRHKP	8	Unmodified	_VKILRHKP_					0	0	0			REV__nc|ENSG00000107338|Q15464-2|SHB	REV__nc|ENSG00000107338|Q15464-2|SHB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.26019287109375	2	495.832186	989.649819	0.95462	0.00047333	4.1677	0.0020665	5.1224	0.0025398	495.8341240060595	34.157	0.93153	34.461	34.241	35.173	0.30494					47	22	3	0	0	0	0.4196	1	2619	2619		12.207	0	1	543640	+		61675	17520	41166	41183	69856	69856					0.15458042430304886
VKILVFKM	8	Unmodified	_VKILVFKM_					0	0	0		ENST00000468309.1_1_10:21957921-21959695:+|nuORF	ENST00000468309.1_1_10:21957921-21959695:+|nuORF	ENST00000468309.1_1_10:21957921-21959695:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.3138122558594	2	489.314449	976.614345	-0.082483	-4.036E-05	-0.76246	-0.00037308	-0.84494	-0.00041344	489.3139692244395	95.381	1.9451	95.447	95.009	96.954	0.06591					116	45	4	0	0	0	0.80706	1	9967	9967		19.36	0	1	1176800			61676	12174	41167	41184	69857	69857					0.1251024385828714
VKIPLRRISQ	10	Unmodified	_VKIPLRRISQ_					0	0	0		nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.9293518066406	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.86195	2	3761	3597;3761		33.039	8.8076	1	2526100			61677	15047	41168	41185	69858;69859	69859					0.1756903972204782
VKIPLRRISQ	10	Unmodified	_VKIPLRRISQ_					0	0	0		nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.92950439453125	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.86272	1	3842	3842		17.833	1.3033	1	2636600			61678	15047	41168	41185	69860	69860					0.1756903972204782
VKIPLRRISQ	10	Unmodified	_VKIPLRRISQ_					0	0	0		nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9295959472656	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.85654	2	4081	4044;4081		21.78	3.9473	1	2612300			61679	15047	41168	41185	69861;69862	69862					0.1756903972204782
VKIPLRRISQ	10	Unmodified	_VKIPLRRISQ_					0	0	0		nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	403.9299011230469	3	403.931185	1208.77173	-1.8895	-0.00076324	-2.2243	-0.00089846	-4.1138	-0.0016617	403.93019013472747	47.065	4.831	47.084	45.794	50.625	0.018967					286	136	3	0	0	0	0.86409	1	3597	3597		25.126	11.618	1	2300300			61680	15047	41168	41185	69863	69863					0.1756903972204782
VKIPLRRISQ	10	Unmodified	_VKIPLRRISQ_					0	0	0		nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.92926025390625	3	403.931185	1208.77173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.381	1	48.288	47.788	48.788	-0.093178								0	0	0	0.45132	1	3681	3681		16.53	3.0219	1				61681	15047	41168	41185	69864	69864					0.1756903972204782
VKIPLRRISQ	10	Unmodified	_VKIPLRRISQ_					0	0	0		nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9295349121094	3	403.931185	1208.77173	-1.067	-0.00043099	-3.6376	-0.0014693	-4.7046	-0.0019003	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.86698	1	4125	4125		21.032	2.5012	1	5907700			61682	15047	41168	41185	69865	69865					0.1756903972204782
VKIPLRRISQ	10	Unmodified	_VKIPLRRISQ_					0	0	0		nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	nc|ENSG00000163485|P30542-2|ADORA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92919921875	3	403.931185	1208.77173	-0.87886	-0.000355	-3.2249	-0.0013026	-4.1037	-0.0016576	403.9297749934075	46.008	1.1325	46.904	46.447	47.58	0.89542					87	27	4	0	0	0	0.86742	1	4324	4324		27.644	9.1129	1	2092900			61683	15047	41168	41185	69866	69866					0.1756903972204782
VKIRAAPL	8	Unmodified	_VKIRAAPL_					0	0	0			REV__chr4:174095453-174097623|13|29.15|0.65|5.48|-|0|LINC02268,LINC02268|1	REV__chr4:174095453-174097623|13|29.15|0.65|5.48|-|0|LINC02268,LINC02268|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516784667969	2	434.292362	866.570172	-0.16818	-7.304E-05	0.3389	0.00014718	0.17072	7.4141E-05	434.29240659435334	78.136	0.86926	78.192	77.889	78.758	0.056114					58	30	2	0	0	0	0.4196	1	7593	7593		28.254	21.061	1	183310	+		61684	15826	41169	41186	69867	69867					0.13154975756299336
VKIRAAPL	8	Unmodified	_VKIRAAPL_					0	0	0			REV__chr4:174095453-174097623|13|29.15|0.65|5.48|-|0|LINC02268,LINC02268|1	REV__chr4:174095453-174097623|13|29.15|0.65|5.48|-|0|LINC02268,LINC02268|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25164794921875	2	434.292362	866.570172	-0.20423	-8.8696E-05	1.3362	0.0005803	1.132	0.0004916	434.2923570659187	79.26	1.402	79.67	78.717	80.119	0.41059					64	32	3	0	0	0	0.4196	1	9074	9074		37.028	1.8278	1	787290	+		61685	15826	41169	41186	69868	69868					0.13154975756299336
VKIRRRRN	8	Unmodified	_VKIRRRRN_					0	0	0		ENST00000296252.8_1_3:185252700-185270227:-|nuORF	ENST00000296252.8_1_3:185252700-185270227:-|nuORF	ENST00000296252.8_1_3:185252700-185270227:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.3590698242188	2	549.359965	1096.70538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.629	1	44.629	44.129	45.129	0								0	0	0	0.29631	1	3246	3246		25.45	1.2474	1				61686	9730	41170	41187	69869	69869					0.16089268670657475
VKIRVAWG	8	Unmodified	_VKIRVAWG_					0	0	0			REV__chr1:171523354-171524821|13|46.08|0.08|9.18|+|2|PRRC2C,PRRC2C|1	REV__chr1:171523354-171524821|13|46.08|0.08|9.18|+|2|PRRC2C,PRRC2C|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.798583984375	2	464.789987	927.565421	-1.6424	-0.00076336	3.1055	0.0014434	1.4631	0.00068002	464.79130074195194	36.947	2.0594	36.958	35.753	37.812	0.011173					99	45	3	0	0	0	0.52826	1	2450	2450		74.517	14.223	1	317960	+		61687	15427	41171	41188	69870	69870					0.09874091613551172
VKISRARGPA	10	Unmodified	_VKISRARGPA_					0	0	0		ENST00000597415.5_2_19:49956542-49956632:-|nuORF	ENST00000597415.5_2_19:49956542-49956632:-|nuORF	ENST00000597415.5_2_19:49956542-49956632:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3281860351562	2	527.827632	1053.64071	-0.052772	-2.7854E-05	-1.2897	-0.00068073	-1.3425	-0.00070859	528.327800772447	46.407	1.5552	46.328	45.955	47.51	-0.079006					63	45	2	0	0	0	0.86272	1	3429	3429		24.519	0.31644	1	542500			61688	14355	41172	41189	69871	69871					0.11603649074004352
VKISVVTK	8	Unmodified	_VKISVVTK_					0	0	0		nc|ENSG00000159842|Q12979-4|ABR;nc|ENSG00000159842|Q12979-2|ABR;ENSG00000159842|ENST00000302538|ABR;ENST00000576668.1_1_17:915781-935047:-|nuORF;ENST00000577052.5_1_17:914824-935047:-|nuORF;nc|ENSG00000159842|Q12979-3|ABR;chr17:1073677-1078814|35|22.17|0.99|4.49|-|ENST00000536794|ABR,ABR	nc|ENSG00000159842|Q12979-4|ABR	nc|ENSG00000159842|Q12979-4|ABR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.9327697753906	2	437.292028	872.569503	-1.632	-0.00071364	-4.0227	-0.0017591	-5.6547	-0.0024727	437.29152523182324	19.573	0.17038	19.617	19.511	19.682	0.043747					10	8	2	0	0	0	0.4196	1	424	424		5.9211	0	1	27541			61689	5550	41173	41190	69872	69872					0.12812136316608758
VKITLTLTY	9	Unmodified	_VKITLTLTY_					0	0	0			REV__nc|ENSG00000054983|P54803-5|GALC	REV__nc|ENSG00000054983|P54803-5|GALC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3251953125	2	526.323525	1050.6325	0.48631	0.00025596	1.9952	0.0010501	2.4815	0.0013061	526.3244623018427	62.826	0.99297	62.947	62.385	63.378	0.1209					77	46	2	0	0	0	0.7932	1	5529	5529		26.693	2.4902	1	145820	+		61690	29694	41174	41191	69873	69873					0.10920657313999982
VKITLTLTY	9	Unmodified	_VKITLTLTY_					0	0	0			REV__nc|ENSG00000054983|P54803-5|GALC	REV__nc|ENSG00000054983|P54803-5|GALC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.7793579101562	2	526.323525	1050.6325	-0.37455	-0.00019714	2.5022	0.001317	2.1277	0.0011198	526.3247100554514	59.734	1.2588	60.288	59.881	61.14	0.55323					44	33	2	0	0	0	0.20789	1	6345	6345		45.952	0	1	176760	+		61691	29694	41174	41191	69874	69874					0.10920657313999982
VKIVRFSLYRR	11	Unmodified	_VKIVRFSLYRR_					0	0	0			REV__nc|ENSG00000100731|Q96RV3-4|PCNX1	REV__nc|ENSG00000100731|Q96RV3-4|PCNX1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.63092041015625	3	479.633139	1435.87759	1.2446	0.00059696	-1.1848	-0.00056826	0.059851	2.8706E-05	479.6318335107323	19.602	1.526	19.132	18.609	20.135	-0.46967					74	32	3	0	0	0	0.75457	1	567	567		21.032	3.1991	1	106770	+		61692	17217	41175	41192	69875	69875					0.17708375567485746
VKKEAEKR	8	Unmodified	_VKKEAEKR_					0	0	0		ENSG00000138785|ENST00000340139|INTS12	ENSG00000138785|ENST00000340139|INTS12	ENSG00000138785|ENST00000340139|INTS12	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7845458984375	2	494.300916	986.587279	-0.92622	-0.00045783	0.96495	0.00047697	0.038725	1.9142E-05	494.3012149097704	17.929	0.53127	17.85	17.564	18.095	-0.078943					30	22	2	0	0	0	0.4196	1	282	282		37.159	14.117	1	23948			61693	4333	41176	41193	69876	69876					0.09344851571472645
VKKESLKKNHL	11	Unmodified	_VKKESLKKNHL_					0	0	0			REV__ENST00000503561.7_1_5:50057675-50130728:+|nuORF	REV__ENST00000503561.7_1_5:50057675-50130728:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.93975830078125	3	441.94175	1322.80342	-0.1083	-4.7863E-05	-4.2447	-0.0018759	-4.353	-0.0019238	441.9397582553112	55.168	1.2362	55.16	54.636	55.872	-0.0077095					99	34	4	0	0	0	0.75779	1	4977	4977		20.315	1.0523	1	447080	+		61694	20276	41177	41194	69877	69877					0.15492987685342996
VKKESLKKNHL	11	Unmodified	_VKKESLKKNHL_					0	0	0			REV__ENST00000503561.7_1_5:50057675-50130728:+|nuORF	REV__ENST00000503561.7_1_5:50057675-50130728:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9400634765625	3	441.94175	1322.80342	-1.4755	-0.00065207	-2.8855	-0.0012752	-4.3609	-0.0019273	441.9403125343586	55.224	1.199	55.287	54.704	55.903	0.063725					106	39	3	0	0	0	0.78351	1	4607	4607		14.779	0.53556	1	485540	+		61695	20276	41177	41194	69878	69878					0.15492987685342996
VKKEVFASLV	10	Unmodified	_VKKEVFASLV_					0	0	0			REV__ENST00000590387.1_1_18:21107838-21109292:+|nuORF	REV__ENST00000590387.1_1_18:21107838-21109292:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3408813476562	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.8651	1	12415	12415		25.574	1.0549	1	4071000	+		61696	29180	41178	41195	69879	69879					0.11535748579581195
VKKGFKHS	8	Unmodified	_VKKGFKHS_					0	0	0			REV__nc|ENSG00000241484|P85298-2|ARHGAP8	REV__nc|ENSG00000241484|P85298-2|ARHGAP8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7773742675781	2	465.779619	929.544686	-1.2002	-0.00055902	-3.1863	-0.0014841	-4.3865	-0.0020432	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.91472	1	7602	7602		44.117	8.4985	1	683640	+		61697	23820	41179	41196	69880	69880					0.07709501233898663
VKKGGAGTR	9	Unmodified	_VKKGGAGTR_					0	0	0			REV__ENST00000497184.5_1_7:44089925-44090420:+|nuORF	REV__ENST00000497184.5_1_7:44089925-44090420:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2658996582031	2	437.266876	872.519199	-0.77238	-0.00033773	-1.5811	-0.00069138	-2.3535	-0.0010291	437.26614393764254	27.409	1.8866	27.234	26.703	28.59	-0.17559					105	43	3	0	0	0	0.7932	1	1537	1537		19.997	0.6368	1	457600	+		61698	27766	41180	41197	69881	69881					0.07784026711476599
VKKHKKKRVV	10	Unmodified	_VKKHKKKRVV_					0	0	0		nc|ENSG00000135506|Q13438-8|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-4|OS9;ENSG00000135506|ENST00000315970|OS9;ENST00000549307.5_1_12:58109828-58113249:+|nuORF	nc|ENSG00000135506|Q13438-8|OS9	nc|ENSG00000135506|Q13438-8|OS9	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2900695800781	3	417.290825	1248.85064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.639	1	72.598	72.098	73.098	-0.04039								0	0	0	0.45132	1	7102	7102		10.587	0.4829	1				61699	4030	41181	41198	69882	69882					0.23617311746943415
VKKIIEKM	8	Unmodified	_VKKIIEKM_					0	0	0		ENST00000510048.1_1_4:74964316-74964352:-|nuORF;ENST00000509101.1_1_4:74735175-74735707:+|nuORF;ENSG00000163739|ENST00000395761|CXCL1;ENSG00000081041|ENST00000508487|CXCL2	ENST00000510048.1_1_4:74964316-74964352:-|nuORF	ENST00000510048.1_1_4:74964316-74964352:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.8140563964844	2	494.814813	987.615073	-0.19792	-9.7932E-05	-0.13866	-6.8609E-05	-0.33657	-0.00016654	494.81463010565506	31.524	0.47109	31.473	31.171	31.642	-0.051033					17	10	2	0	0	0	0.86677	1	1785	1785		27.882	2.4321	1	34078			61700	1458	41182	41199	69883	69883					0.12077038507334237
VKKIIEKM	8	Unmodified	_VKKIIEKM_					0	0	0		ENST00000510048.1_1_4:74964316-74964352:-|nuORF;ENST00000509101.1_1_4:74735175-74735707:+|nuORF;ENSG00000163739|ENST00000395761|CXCL1;ENSG00000081041|ENST00000508487|CXCL2	ENST00000510048.1_1_4:74964316-74964352:-|nuORF	ENST00000510048.1_1_4:74964316-74964352:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	494.814813	987.615073	0.2049	0.00010139	-0.60771	-0.0003007	-0.40281	-0.00019931	494.81428223883705	31.363	0.51293	31.381	31.121	31.634	0.018362	-0.013765	-0.00077603	NaN	27.882	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29971			61701	1458	41182	41199							0.12077038507334237
VKKIIEKM	8	Unmodified	_VKKIIEKM_					0	0	0		ENST00000510048.1_1_4:74964316-74964352:-|nuORF;ENST00000509101.1_1_4:74735175-74735707:+|nuORF;ENSG00000163739|ENST00000395761|CXCL1;ENSG00000081041|ENST00000508487|CXCL2	ENST00000510048.1_1_4:74964316-74964352:-|nuORF	ENST00000510048.1_1_4:74964316-74964352:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	494.814813	987.615073	-1.3793	-0.0006825	1.4586	0.00072175	0.079327	3.9252E-05	494.8154183963229	31.341	0.51816	31.331	31.137	31.655	-0.010656	-0.064521	0.0012689	NaN	27.882	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32936			61702	1458	41182	41199							0.12077038507334237
VKKIKVSVR	9	Unmodified	_VKKIKVSVR_					0	0	0		nc|ENSG00000141480|P32121-5|ARRB2;nc|ENSG00000141480|P32121-2|ARRB2;ENSG00000141480|ENST00000269260|ARRB2;nc|ENSG00000141480|P32121-3|ARRB2;nc|ENSG00000141480|P32121-4|ARRB2	nc|ENSG00000141480|P32121-5|ARRB2	nc|ENSG00000141480|P32121-5|ARRB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	528.8651123046875	2	528.866226	1055.7179	3.3028	0.0017468	-3.6577	-0.0019345	-0.35492	-0.0001877	528.8642129195995	109.02	0.44663	108.99	108.76	109.21	-0.029388					48	16	4	0	0	0	0.7932	1	12087	12087		12.207	0	1	2666200			61703	4504	41183	41200	69884	69884					0.19226867290308292
VKKKFSVKEKT	11	Unmodified	_VKKKFSVKEKT_					0	0	0			REV__ENSG00000177150|ENST00000651643|FAM210A	REV__ENSG00000177150|ENST00000651643|FAM210A	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.2678527832031	3	441.27825	1320.81292	0.43262	0.00019091	3.6469	0.0016093	4.0795	0.0018002	441.2798800527685	66.435	0.35466	66.562	66.427	66.782	0.12649					26	16	2	0	0	0	0.17955	1	5916	5916		2.8518	0	1	98550	+		61704	22184	41184	41201	69885	69885					0.16534755970837978
VKKKKILS	8	Unmodified	_VKKKKILS_					0	0	0		ENST00000256015.4_1_12:92537662-92537806:-|nuORF	ENST00000256015.4_1_12:92537662-92537806:-|nuORF	ENST00000256015.4_1_12:92537662-92537806:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2875671386719	2	472.33677	942.658987	-0.97349	-0.00045982	2.4393	0.0011522	1.4658	0.00069235	472.3375254407492	95.508	0.60254	95.508	95.27	95.873	0					17	13	2	0	0	0	0.4196	1	9541	9541		1.3276	0	1	83649			61705	9333	41185	41202	69886	69886					0.18536390995984675
VKKKKILS	8	Unmodified	_VKKKKILS_					0	0	0		ENST00000256015.4_1_12:92537662-92537806:-|nuORF	ENST00000256015.4_1_12:92537662-92537806:-|nuORF	ENST00000256015.4_1_12:92537662-92537806:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	472.33677	942.658987	-0.91634	-0.00043282	4.6412	0.0021922	3.7248	0.0017594	472.33891511335423	95.052	0.32117	95.283	95.148	95.469	0.23103	-0.14327	0.0050013	NaN	0	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	177050			61706	9333	41185	41202							0.18536390995984675
VKKKKIVRIR	10	Unmodified	_VKKKKIVRIR_					0	0	0			REV__ENSG00000088882|ENST00000380605|CPXM1	REV__ENSG00000088882|ENST00000380605|CPXM1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	423.3072204589844	3	423.306475	1266.89759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.356	1	19.283	18.783	19.783	-0.073704								0	0	0	0.45132	1	414	414		7.3997	3.0609	1		+		61707	16951	41186	41203	69887	69887					0.2748217129810655
VKKKLRKKG	9	Unmodified	_VKKKLRKKG_					0	0	0		chr18:32974681-33211896|18|18.28|0.74|4.63|-|ENST00000581524|CCDC178,CCDC178;nc|ENSG00000166960|Q5BJE1-3|CCDC178;nc|ENSG00000166960|Q5BJE1-4|CCDC178;ENSG00000166960|ENST00000383096|CCDC178	chr18:32974681-33211896|18|18.28|0.74|4.63|-|ENST00000581524|CCDC178,CCDC178	chr18:32974681-33211896|18|18.28|0.74|4.63|-|ENST00000581524|CCDC178,CCDC178	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.3348999023438	2	542.887493	1083.76043	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.04	1	116.98	116.48	117.48	-0.064972								0	0	0	0.36138	1	14006	14006		3.6843	0	1				61708	251	41187	41204	69888	69888					0.22190262418530438
VKKKRQSNKEV	11	Unmodified	_VKKKRQSNKEV_					0	0	0			REV__ENSG00000214866|ENST00000399143|DCDC2C	REV__ENSG00000214866|ENST00000399143|DCDC2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.9434814453125	3	448.60877	1342.80448	-0.12449	-5.5849E-05	1.3955	0.00062604	1.271	0.00057019	448.94365307156517	77.124	0.95989	77.076	76.709	77.669	-0.048264					104	45	3	0	0	0	0.76892	1	7652	7652		17.833	1.3033	1	533170	+		61709	23666	41188	41205	69889	69889					0.14679202054185225
VKKLHGKAI	9	Unmodified	_VKKLHGKAI_					0	0	0			REV__ENSG00000198730|ENST00000361367|CTR9	REV__ENSG00000198730|ENST00000361367|CTR9	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.3395080566406	2	497.332019	992.649485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.26	1	113.26	112.76	113.76	0								0	0	0	0.35896	1	11705	11705		12.207	3.9756	1		+		61710	23368	41189	41206	69890	69890					0.15286622710459596
VKKLKAMG	8	Unmodified	_VKKLKAMG_					0	0	0		ENSG00000105245|ENST00000252891|NUMBL	ENSG00000105245|ENST00000252891|NUMBL	ENSG00000105245|ENST00000252891|NUMBL	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26568603515625	2	437.780773	873.546994	0.50825	0.0002225	-0.6689	-0.00029283	-0.16065	-7.0328E-05	437.78082335795096	22.737	0.098961	22.728	22.67	22.769	-0.0088234					6	4	2	0	0	0	0.4196	1	683	683		3.9852	0	1	23183			61711	2193	41190	41207	69891	69891					0.1051621364734956
VKKMKLQLALQ	11	Unmodified	_VKKMKLQLALQ_					0	0	0		nc|ENSG00000123607|Q7Z4L5-2|TTC21B;ENST00000464374.5_1_2:166785584-166810215:-|nuORF;ENSG00000123607|ENST00000243344|TTC21B	nc|ENSG00000123607|Q7Z4L5-2|TTC21B	nc|ENSG00000123607|Q7Z4L5-2|TTC21B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.28662109375	3	433.944214	1298.81081	-0.36837	-0.00015985	-1.5858	-0.00068813	-1.9541	-0.00084798	433.9431414057699	49.287	0.24702	49.747	49.665	49.912	0.45983					6	5	2	0	0	0	0.17432	1	4807	4807		33.039	12.007	1	62694			61712	3284	41191	41208	69892	69892					0.17336003961395363
VKKPKKAA	8	Unmodified	_VKKPKKAA_					0	0	0			REV__ENSG00000124575|ENST00000244534|H1-3	REV__ENSG00000124575|ENST00000244534|H1-3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30010986328125	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.82419	1	6973	6973		13.775	0	1	1921500	+		61713	18596	41192	41209	69893	69893					0.14627262273347696
VKKPRNSK	8	Unmodified	_VKKPRNSK_					0	0	0		nc|ENSG00000148498|Q8TEW0-5|PARD3;nc|ENSG00000148498|Q8TEW0-3|PARD3;nc|ENSG00000148498|Q8TEW0-7|PARD3;nc|ENSG00000148498|Q8TEW0-6|PARD3;nc|ENSG00000148498|Q8TEW0-4|PARD3;nc|ENSG00000148498|Q8TEW0-11|PARD3;ENSG00000148498|ENST00000374788|PARD3;nc|ENSG00000148498|Q8TEW0|PARD3	nc|ENSG00000148498|Q8TEW0-5|PARD3	nc|ENSG00000148498|Q8TEW0-5|PARD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8028869628906	2	478.803626	955.592698	-1.2382	-0.00059286	4.3011	0.0020594	3.0629	0.0014665	478.80558529591235	40.624	1.0284	40.581	39.923	40.951	-0.042892					45	26	2	0	0	0	0.81897	1	2993	2993		20.947	2.6225	1	267990			61714	4966	41193	41210	69894	69894					0.11312575153931448
VKKQERGPHG	10	Unmodified	_VKKQERGPHG_					0	0	0			REV__ENST00000594066.1_1_19:15355493-15355571:-|nuORF	REV__ENST00000594066.1_1_19:15355493-15355571:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.3195190429688	2	568.320171	1134.62579	-0.71804	-0.00040807	3.3255	0.00189	2.6075	0.0014819	568.3220352388357	78.452	0.55788	78.452	78.235	78.793	0					30	19	2	0	0	0	0.70553	1	7187	7187		44.377	3.599	1	80563	+		61715	29235	41194	41211	69895	69895					0.06386157205974996
VKKQKVEV	8	Unmodified	_VKKQKVEV_					0	0	0		ENSG00000163536|ENST00000446050|SERPINI1	ENSG00000163536|ENST00000446050|SERPINI1	ENSG00000163536|ENST00000446050|SERPINI1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.8055725097656	2	479.30821	956.601866	0.10868	5.2091E-05	-0.84612	-0.00040555	-0.73744	-0.00035346	479.30779418468194	38.48	0.5009	38.452	38.219	38.72	-0.027843					15	11	2	0	0	0	0.4196	1	2613	2613		17.365	0	1	59855			61716	5820	41195	41212	69896	69896					0.12182923719603878
VKKRRGGTSR	10	Unmodified	_VKKRRGGTSR_					0	0	0			REV__nc|ENSG00000101445|Q96T49-2|PPP1R16B	REV__nc|ENSG00000101445|Q96T49-2|PPP1R16B	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.2642211914062	2	572.854712	1143.69487	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.484	1	19.41	18.91	19.91	-0.073704								0	0	0	0.45132	1	428	428		19.104	0.77911	1		+		61717	17281	41196	41213	69897	69897					0.12877241225555736
VKKRRIKFFLL	11	Unmodified	_VKKRRIKFFLL_					0	0	0			REV__ENST00000220003.13_1_15:75095013-75095301:+|nuORF	REV__ENST00000220003.13_1_15:75095013-75095301:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.728515625	3	483.325646	1446.95511	-0.37661	-0.00018202	-2.5786	-0.0012463	-2.9552	-0.0014283	483.3242939091285	73.905	1.1331	74.293	73.692	74.826	0.38779					50	29	3	0	0	0	0.18216	1	8305	8305		14.086	8.3872	1	251430	+		61718	24150	41197	41214	69898	69898					0.24951013503687136
VKKRRIKFFLL	11	Unmodified	_VKKRRIKFFLL_					0	0	0			REV__ENST00000220003.13_1_15:75095013-75095301:+|nuORF	REV__ENST00000220003.13_1_15:75095013-75095301:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	483.325646	1446.95511	-0.38541	-0.00018628	-3.0434	-0.001471	-3.4288	-0.0016572	483.3242431169149	73.706	0.78864	74.265	73.928	74.717	0.5589	-0.013934	-0.00023107	NaN	14.086	45	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	336290	+		61719	24150	41197	41214							0.24951013503687136
VKKRVKGKMR	10	Unmodified	_VKKRVKGKMR_					0	0	0		ENST00000489193.1_1_3:86062314-86062485:+|nuORF	ENST00000489193.1_1_3:86062314-86062485:+|nuORF	ENST00000489193.1_1_3:86062314-86062485:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	615.4042358398438	2	615.402984	1228.79141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.765	1	23.765	23.265	24.265	0								0	0	0	0.45132	1	763	763		20.947	6.8098	1				61720	12646	41198	41215	69899	69899					0.18617092461113316
VKKRWRSQW	9	Unmodified	_VKKRWRSQW_					0	0	0			REV__nc|ENSG00000196557|O95180-2|CACNA1H	REV__nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	637.3688354492188	2	637.367456	1272.72036	2.7628	0.0017609	2.0059	0.0012785	4.7688	0.0030394	637.3686513642523	105.87	2.2422	105.84	105.02	107.26	-0.03714					153	52	4	0	0	0	0.7932	1	11694	11694		21.96	1.013	1	1640000	+		61721	23145	41199	41216	69900	69900					0.09490715747961076
VKKSAAFTKKL	11	Unmodified	_VKKSAAFTKKL_					0	0	0		ENSG00000086967|ENST00000357701|MYBPC2	ENSG00000086967|ENST00000357701|MYBPC2	ENSG00000086967|ENST00000357701|MYBPC2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	610.8067626953125	2	610.889898	1219.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.706	1	24.72	24.22	25.22	0.013996								0	0	0	0.56276	1	858	858		12.207	1.9414	1				61722	1563	41200	41217	69901	69901					0.1641510177064447
VKKVENKDLPR	11	Unmodified	_VKKVENKDLPR_					0	0	0			REV__ENSG00000156502|ENST00000359655|SUPV3L1	REV__ENSG00000156502|ENST00000359655|SUPV3L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.5992736816406	3	442.601504	1324.78268	-0.78528	-0.00034757	-3.6542	-0.0016173	-4.4394	-0.0019649	442.5997035886443	48.9	1.7146	48.875	48.139	49.854	-0.025112					92	38	3	0	0	0	0.74771	1	4120	4120		22.562	0.78116	1	323300	+		61723	20492	41201	41218	69902	69902					0.13328397305622275
VKKVENKDLPR	11	Unmodified	_VKKVENKDLPR_					0	0	0			REV__ENSG00000156502|ENST00000359655|SUPV3L1	REV__ENSG00000156502|ENST00000359655|SUPV3L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.5986328125	3	442.601504	1324.78268	-0.41498	-0.00018367	-3.9153	-0.0017329	-4.3302	-0.0019166	442.59963459131313	49.027	1.5485	48.933	48.252	49.8	-0.093178					102	37	3	0	0	0	0.72374	1	3754	3754		27.644	1.5805	1	295460	+		61724	20492	41201	41218	69903	69903					0.13328397305622275
VKKVGLAMH	9	Unmodified	_VKKVGLAMH_					0	0	0			REV__ENSG00000147262|ENST00000682440|GPR119	REV__ENSG00000147262|ENST00000682440|GPR119	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7974548339844	2	491.796955	981.579357	-0.47857	-0.00023536	-1.801	-0.0008857	-2.2795	-0.0011211	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.78058	1	4544	4544		30.504	1.3541	1	1898900	+		61725	20063	41202	41219	69904	69904					0.08783001050335315
VKKVKRVLK	9	Unmodified	_VKKVKRVLK_					0	0	0		ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.2879638671875	2	549.397693	1096.78083	0.39479	0.00021689	-0.22148	-0.00012168	0.17331	9.5216E-05	549.3974873402011	90.562	0.56324	91.012	90.698	91.261	0.45058					14	13	2	0	0	0	0.20789	1	10698	10698		11.511	0	1	138100			61726	7384	41203	41220	69905	69905					0.23631433078344344
VKKVKRVLK	9	Unmodified	_VKKVKRVLK_					0	0	0		ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.2872314453125	2	549.397693	1096.78083	-1.3944	-0.0007661	1.5229	0.00083667	0.12845	7.0572E-05	549.3984801065534	90.653	0.87708	91.124	90.687	91.564	0.47068					24	21	2	0	0	0	0.20789	1	10746	10746		29.15	6.1071	1	176560			61727	7384	41203	41220	69906	69906					0.23631433078344344
VKLAEAMTQ	9	Unmodified	_VKLAEAMTQ_					0	0	0			REV__ENST00000465385.5_1_22:24122222-24125728:+|nuORF	REV__ENST00000465385.5_1_22:24122222-24125728:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.3044738769531	2	495.76806	989.521567	-0.078007	-3.8673E-05	-2.9571	-0.001466	-3.0351	-0.0015047	495.7660303701194	64.527	0.61285	65.081	64.685	65.298	0.55386					27	14	3	0	0	0	0.20789	1	6994	6994		19.997	0	1	111780	+		61728	17117	41204	41221	69907	69907					0.026386943342458835
VKLARPRLKLP	11	Unmodified	_VKLARPRLKLP_					0	0	0		ENSG00000142235|ENST00000600059|LMTK3	ENSG00000142235|ENST00000600059|LMTK3	ENSG00000142235|ENST00000600059|LMTK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	430.9605712890625	3	430.962597	1289.86596	-1.3804	-0.0005949	-3.5971	-0.0015502	-4.9775	-0.0021451	430.960928295924	39.883	1.7352	40.251	38.964	40.699	0.36797					162	41	5	0	0	0	0.8498	1	3394	3394		6.001	0	1	5466100			61729	4554	41205	41222	69908	69908					0.23262178544155176
VKLEDLIV	8	Unmodified	_VKLEDLIV_					0	0	0		ENST00000531813.5_1_11:108004986-108013306:+|nuORF;ENSG00000075239|ENST00000265838|ACAT1	ENST00000531813.5_1_11:108004986-108013306:+|nuORF	ENST00000531813.5_1_11:108004986-108013306:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.7947998046875	2	464.789318	927.564084	-0.014658	-6.8129E-06	3.0233	0.0014052	3.0086	0.0013984	464.7906118209948	36.96	1.5179	36.936	36.1	37.617	-0.023979					72	33	3	0	0	0	0.92973	1	2429	2429		50.025	2.1089	1	237030			61730	1326	41206	41223	69909	69909					0.09740412734129222
VKLFLKKPS	9	Unmodified	_VKLFLKKPS_					0	0	0		nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;ENSG00000006125|ENST00000610402|AP2B1	nc|ENSG00000006125|P63010-3|AP2B1	nc|ENSG00000006125|P63010-3|AP2B1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.3056030273438	2	530.349877	1058.6852	1.1688	0.00061987	1.1455	0.00060752	2.3143	0.0012274	530.3513636884184	33.67	0.20565	33.84	33.737	33.943	0.16971					6	4	2	0	0	0	0.20789	1	2449	2449		25.45	13.243	1	27847			61731	695	41207	41224	69910	69910					0.15820660167446476
VKLFNKTAK	9	Unmodified	_VKLFNKTAK_					0	0	0			REV__ENST00000325404.2_1_3:181431262-181431475:+|nuORF	REV__ENST00000325404.2_1_3:181431262-181431475:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.76220703125	2	524.829309	1047.64407	-1.1154	-0.00058539	-0.30135	-0.00015816	-1.4167	-0.00074355	524.8289590807682	42.301	0.401	42.715	42.545	42.946	0.4139					16	9	2	0	0	0	0.20789	1	3789	3789		52.937	23.787	1	239660	+		61732	25062	41208	41225	69911	69911					0.12214899127980061
VKLFNKTAK	9	Unmodified	_VKLFNKTAK_					0	0	0			REV__ENST00000325404.2_1_3:181431262-181431475:+|nuORF	REV__ENST00000325404.2_1_3:181431262-181431475:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	524.2672729492188	2	524.829309	1047.64407	-1.5917	-0.00083538	0.46289	0.00024294	-1.1288	-0.00059244	524.8292594969722	42.19	0.3605	42.887	42.691	43.052	0.69754					13	8	2	0	0	0	0.20789	1	3778	3778		26.693	3.6504	1	230430	+		61733	25062	41208	41225	69912	69912					0.12214899127980061
VKLFRVRM	8	Unmodified	_VKLFRVRM_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8270874023438	2	524.826047	1047.63754	-0.59499	-0.00031227	3.2324	0.0016964	2.6374	0.0013842	524.8275943455435	102.47	0.70876	102.47	102.25	102.96	0					43	17	3	0	0	0	0.81548	1	10505	10505		20.482	0.48506	1	339820			61734	7987	41209	41226	69913	69913					0.11562682695625881
VKLGKLVVK	9	Unmodified	_VKLGKLVVK_					0	0	0			REV__ENSG00000182261|ENST00000691676|NLRP10	REV__ENSG00000182261|ENST00000691676|NLRP10	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.7589416503906	2	492.35242	982.690287	0.2332	0.00011482	-1.0377	-0.0005109	-0.80448	-0.00039609	492.35178680784685	19.145	0.61075	18.676	18.272	18.882	-0.46967					18	13	2	0	0	0	0.20789	1	451	451		21.96	5.4867	1	32091	+		61735	22513	41210	41227	69914	69914					0.1982496403006735
VKLGKTQT	8	Unmodified	_VKLGKTQT_					0	0	0			REV__nc|ENSG00000290292|Q8IX15|HOMEZ	REV__nc|ENSG00000290292|Q8IX15|HOMEZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.7712097167969	2	437.77146	873.528367	-1.5883	-0.00069529	1.3765	0.00060259	-0.21176	-9.2702E-05	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.84341	1	2381	2381		24.203	1.1603	1	1227500	+		61736	30293	41211	41228	69915	69915					0.08654375277126292
VKLGPLLE	8	Unmodified	_VKLGPLLE_					0	0	0			REV__ENSG00000127399|ENST00000359623|LRRC61	REV__ENSG00000127399|ENST00000359623|LRRC61	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.780517578125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.323	1	68.287	67.787	68.787	-0.036301								0	0	0	0.30252	1	6586	6586		19.36	4.6959	1		+		61737	18731	41212	41229	69916	69916					0.10388447425282266
VKLGSQIFIKH	11	Unmodified	_VKLGSQIFIKH_					0	0	0		nc|ENSG00000105289|O95049-5|TJP3;ENSG00000105289|ENST00000541714|TJP3;nc|ENSG00000105289|O95049-4|TJP3;nc|ENSG00000105289|O95049-3|TJP3	nc|ENSG00000105289|O95049-5|TJP3	nc|ENSG00000105289|O95049-5|TJP3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	635.3916625976562	2	635.387522	1268.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.4	1	107.37	106.87	107.87	-0.034409								0	0	0	0.56276	1	11687	11687		36.447	1.2947	1				61738	2200	41213	41230	69917	69917					0.1368621762787825
VKLHLSAQPQ	10	Unmodified	_VKLHLSAQPQ_					0	0	0			REV__ENST00000460891.5_1_20:18414268-18434419:-|nuORF	REV__ENST00000460891.5_1_20:18414268-18434419:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8260498046875	2	560.827298	1119.64004	-0.09953	-5.5819E-05	-1.8691	-0.0010482	-1.9686	-0.0011041	560.8260922946897	50.931	0.59262	50.839	50.585	51.178	-0.091797					43	16	3	0	0	0	0.86446	1	4030	4030		30.569	6.3661	1	1039600	+		61739	27017	41214	41231	69918	69918					0.08500809634256257
VKLILRKLGPV	11	Unmodified	_VKLILRKLGPV_					0	0	0		ENSG00000120800|ENST00000261637|UTP20;ENST00000551825.1_1_12:101673946-101684681:+|nuORF	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.17559814453125	3	412.623581	1234.84891	2.1288	0.00087839	1.3354	0.00055101	3.4642	0.0014294	412.6224195739409	95.174	0.2757	95.597	95.391	95.667	0.42365					10	6	3	0	0	0	0.17863	1	11368	11368		19.263	9.6165	1	142700			61740	3152	41215	41232	69919	69919					0.24088257938342394
VKLIVRWGRP	10	Unmodified	_VKLIVRWGRP_					0	0	0			REV__ENST00000399765.5_1_22:18222158-18257212:-|nuORF	REV__ENST00000399765.5_1_22:18222158-18257212:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.70947265625	3	408.596025	1222.76625	1.4733	0.00060196	2.6486	0.0010822	4.1219	0.0016842	408.5959905591971	16.857	0.20524	16.37	16.283	16.488	-0.48718					5	4	2	0	0	0	0.37624	1	185	185		21.686	6.3526	1	17706	+		61741	26236	41216	41233	69920	69920					0.1637736093020976
VKLKITAS	8	Unmodified	_VKLKITAS_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.2555236816406	2	430.284203	858.553853	2.1373	0.00091964	-1.5568	-0.00066988	0.58045	0.00024976	430.28314978937544	26.744	0.40254	26.403	26.323	26.725	-0.34035					10	8	2	0	0	0	0.4196	1	1519	1519		19.36	7.1531	1	30794	+		61742	20437;29946	41217	41234	69921	69921					0.11891849799542342
VKLLEELL	8	Unmodified	_VKLLEELL_					0	0	0		ENSG00000143669|ENST00000389793|LYST;nc|ENSG00000143669|Q99698-2|LYST;ENST00000489585.5_1_1:235926109-235996891:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8041687011719	2	478.804968	955.595384	-1.7281	-0.00082743	3.3413	0.0015998	1.6132	0.00077242	478.806439205216	41.295	1.2034	41.295	40.815	42.018	0					75	35	3	0	0	0	0.82464	1	2841	2841		21.702	0	1	280900			61743	4656	41218	41235	69922	69922					0.11580985768216578
VKLLFTLDKA	10	Unmodified	_VKLLFTLDKA_					0	0	0			REV__ENST00000540266.5_1_12:26383966-26384053:+|nuORF	REV__ENST00000540266.5_1_12:26383966-26384053:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3565063476562	2	574.357899	1146.70125	-1.0357	-0.00059487	-2.3996	-0.0013783	-3.4354	-0.0019731	574.3564651498671	100.18	4.2351	100.22	97.907	102.14	0.0411					178	98	2	0	0	0	0.86587	1	10683	10683		29.17	0.020503	1	715310	+		61744	28460	41219	41236	69923	69923					0.1337632161369129
VKLLLLLLL	9	Unmodified	_VKLLLLLLL_					0	0	0			REV__ENSG00000170775|ENST00000303921|GPR37	REV__ENSG00000170775|ENST00000303921|GPR37	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8182373046875	2	519.388471	1036.76239	0.33461	0.00017379	-3.1341	-0.0016278	-2.7995	-0.001454	519.3868085043715	85.458	0.24597	85.897	85.74	85.986	0.43967					9	5	2	0	0	0	0.20789	1	9963	9963		11.511	0	1	76339	+		61745	21685	41220	41237	69924	69924					0.24547878383805255
VKLLLLLLL	9	Unmodified	_VKLLLLLLL_					0	0	0			REV__ENSG00000170775|ENST00000303921|GPR37	REV__ENSG00000170775|ENST00000303921|GPR37	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8179931640625	2	519.388471	1036.76239	-0.38655	-0.00020077	-2.08	-0.0010803	-2.4665	-0.0012811	519.3872966361714	85.512	0.53242	85.959	85.703	86.235	0.44736					21	12	2	0	0	0	0.20789	1	10008	10008		6.7355	0	1	94972	+		61746	21685	41220	41237	69925	69925					0.24547878383805255
VKLLRGLA	8	Unmodified	_VKLLRGLA_					0	0	0		chrX:47226027-47226294|18|37.67|0.53|6.14|+|0|CDK16,None|1	chrX:47226027-47226294|18|37.67|0.53|6.14|+|0|CDK16,None|1	chrX:47226027-47226294|18|37.67|0.53|6.14|+|0|CDK16,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.304443359375	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.82464	1	8574	8574		21.702	1.2205	1	6323600			61747	551	41221	41238	69926	69926					0.14627262273347696
VKLLVLIFL	9	Unmodified	_VKLLVLIFL_					0	0	0			REV__ENST00000396128.8_1_14:45397628-45397811:-|nuORF	REV__ENST00000396128.8_1_14:45397628-45397811:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.37353515625	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.5	1	114.6	114.1	115.1	0.098114								0	0	0	0.36143	1	12247	12247		3.9852	0	1		+		61748	26135	41222	41239	69927	69927					0.2049930534969917
VKLMAPPSA	9	Unmodified	_VKLMAPPSA_					0	0	0			REV__ENST00000560634.1_1_15:84858634-84860056:+|nuORF	REV__ENST00000560634.1_1_15:84858634-84860056:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2637023925781	2	457.262413	912.510274	0.26759	0.00012236	3.9569	0.0018093	4.2245	0.0019317	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.7932	1	7848	7848		26.693	1.2427	1	1458600	+		61749	28732	41223	41240	69928	69928					0.05051917030766617
VKLMRPGPK	9	Unmodified	_VKLMRPGPK_					0	0	0		ENST00000421346.1_1_20:37166917-37166977:+|nuORF	ENST00000421346.1_1_20:37166917-37166977:+|nuORF	ENST00000421346.1_1_20:37166917-37166977:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3176879882812	2	513.318054	1024.62156	-0.0063971	-3.2837E-06	-2.2669	-0.0011636	-2.2733	-0.0011669	513.3168980017223	55.245	1.1626	55.238	54.853	56.015	-0.0077057					50	31	3	0	0	0	0.78536	1	4903	4903		29.15	3.6994	1	234670			61750	11461	41224	41241	69929	69929					0.11022976458730227
VKLNVLSDLN	10	Unmodified	_VKLNVLSDLN_					0	0	0			REV__ENSG00000188306|ENST00000340806|LRRIQ4	REV__ENSG00000188306|ENST00000340806|LRRIQ4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.3235473632812	2	557.826963	1113.63937	0.40844	0.00022784	-3.2839	-0.0018318	-2.8755	-0.001604	557.8269312611109	51.132	1.327	51.567	51.202	52.529	0.43505					64	31	4	0	0	0	0.82886	1	5061	5061		37.812	4.9991	1	349150	+		61751	22993	41225	41242	69930	69930					0.08709970194581729
VKLQLSLYMKS	11	Unmodified	_VKLQLSLYMKS_					0	0	0		nc|ENSG00000073060|Q8WTV0-3|SCARB1;nc|ENSG00000073060|Q8WTV0-4|SCARB1;ENST00000535005.5_1_12:125267231-125351555:-|nuORF;nc|ENSG00000073060|Q8WTV0-5|SCARB1;ENSG00000073060|ENST00000261693|SCARB1;nc|ENSG00000073060|Q8WTV0|SCARB1	nc|ENSG00000073060|Q8WTV0-3|SCARB1	nc|ENSG00000073060|Q8WTV0-3|SCARB1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2677001953125	3	437.256458	1308.74754	1.2342	0.00053965	-4.3416	-0.0018984	-3.1074	-0.0013587	437.2538571112728	50.403	0.26388	50.411	50.169	50.433	0.0077438					8	5	2	0	0	0	0.17244	1	4293	4293		10.562	0	1	22737			61752	1287	41226	41243	69931	69931					0.10552018453495293
VKLRVGNLIK	10	Unmodified	_VKLRVGNLIK_					0	0	0			REV__ENSG00000155636|ENST00000286070|RBM45	REV__ENSG00000155636|ENST00000286070|RBM45	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.75439453125	2	570.384783	1138.75501	-1.8017	-0.0010277	4.2516	0.0024251	2.4499	0.0013974	570.3869870216799	40.267	0.84856	40.659	40.216	41.065	0.39209					39	22	2	0	0	0	0.37624	1	3443	3443		20.947	10.682	1	330560	+		61753	20436	41227	41244	69932	69932					0.1911853883607364
VKLSKQLI	8	Unmodified	_VKLSKQLI_					0	0	0			REV__nc|ENSG00000197653|Q8IVF4|DNAH10	REV__nc|ENSG00000197653|Q8IVF4|DNAH10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.8096923828125	2	464.813128	927.611703	-0.0085672	-3.9822E-06	0.0038038	1.768E-06	-0.0047635	-2.2141E-06	464.812967373292	36.951	1.2338	36.927	36.503	37.737	-0.023979					51	27	3	0	0	0	0.93293	1	2398	2398		51.335	3.6781	1	390210	+		61754	23257	41228	41245	69933	69933					0.1450011172498762
VKLSKYWLFV	10	Unmodified	_VKLSKYWLFV_					0	0	0			REV__ENST00000396193.5_2_7:31792725-31792857:-|nuORF	REV__ENST00000396193.5_2_7:31792725-31792857:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.88232421875	2	641.881542	1281.74853	1.5974	0.0010254	-0.22618	-0.00014518	1.3712	0.00088018	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.86718	1	10150	10150		27.882	0	1	4266200	+		61755	26137	41229	41246	69934	69934					0.1189260088467563
VKLSRLLPLRV	11	Unmodified	_VKLSRLLPLRV_					0	0	0		ENST00000238081.7_1_2:9770567-9771075:-|nuORF	ENST00000238081.7_1_2:9770567-9771075:-|nuORF	ENST00000238081.7_1_2:9770567-9771075:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	431.96246337890625	3	431.962485	1292.86563	0.34906	0.00015078	-0.32067	-0.00013852	0.028387	1.2262E-05	431.96229258150555	82.903	3.3736	83.376	82.162	85.536	0.47383					177	82	3	0	0	0	0.78083	1	9680	9680		15.337	1.8295	1	562900			61756	9240	41230	41247	69935	69935					0.2309075882428715
VKLTLLNSM	9	Unmodified	_VKLTLLNSM_					0	0	0		nc|ENSG00000143469|Q8NB59-3|SYT14;nc|ENSG00000143469|Q8NB59|SYT14;ENSG00000143469|ENST00000367019|SYT14;nc|ENSG00000143469|Q8NB59-5|SYT14;nc|ENSG00000143469|Q8NB59-7|SYT14	nc|ENSG00000143469|Q8NB59-3|SYT14	nc|ENSG00000143469|Q8NB59-3|SYT14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80340576171875	2	509.801903	1017.58925	-0.054506	-2.7787E-05	3.6278	0.0018495	3.5733	0.0018217	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.75725	2	8388	8388;8503		36.447	9.7538	1	828920			61757	4634	41231	41248	69936;69937	69936					0.08116144265068215
VKLTLLNSM	9	Unmodified	_VKLTLLNSM_					0	0	0		nc|ENSG00000143469|Q8NB59-3|SYT14;nc|ENSG00000143469|Q8NB59|SYT14;ENSG00000143469|ENST00000367019|SYT14;nc|ENSG00000143469|Q8NB59-5|SYT14;nc|ENSG00000143469|Q8NB59-7|SYT14	nc|ENSG00000143469|Q8NB59-3|SYT14	nc|ENSG00000143469|Q8NB59-3|SYT14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8033447265625	2	509.801903	1017.58925	-0.38177	-0.00019462	3.8836	0.0019799	3.5019	0.0017853	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.54908	2	8113	8113;8161		49.536	8.9634	1	948010			61758	4634	41231	41248	69938;69939	69938					0.08116144265068215
VKLTLLNSM	9	Unmodified	_VKLTLLNSM_					0	0	0		nc|ENSG00000143469|Q8NB59-3|SYT14;nc|ENSG00000143469|Q8NB59|SYT14;ENSG00000143469|ENST00000367019|SYT14;nc|ENSG00000143469|Q8NB59-5|SYT14;nc|ENSG00000143469|Q8NB59-7|SYT14	nc|ENSG00000143469|Q8NB59-3|SYT14	nc|ENSG00000143469|Q8NB59-3|SYT14	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.8035583496094	2	509.801903	1017.58925	0.31699	0.0001616	3.2339	0.0016486	3.5509	0.0018103	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.67345	1	9999	9999		42.396	3.59	1	2635100			61759	4634	41231	41248	69940	69940					0.08116144265068215
VKLTLLTCQ	9	Unmodified	_VKLTLLTCQ_					0	0	0		nc|ENSG00000088280|Q8TDY4-3|ASAP3;ENSG00000088280|ENST00000336689|ASAP3	nc|ENSG00000088280|Q8TDY4-3|ASAP3	nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8038024902344	2	509.801903	1017.58925	-0.38177	-0.00019462	3.8836	0.0019799	3.5019	0.0017853	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.76764	1	8136	8136		34.173	5.0025	1	948010			61760	1587	41232	41249	69941	69941					0.08116144265056846
VKLTVSPEP	9	Unmodified	_VKLTVSPEP_					0	0	0		nc|ENSG00000145506|Q969F2-2|NKD2;ENSG00000145506|ENST00000296849|NKD2	nc|ENSG00000145506|Q969F2-2|NKD2	nc|ENSG00000145506|Q969F2-2|NKD2	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.28515625	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.842	1	57.397	56.897	57.897	0.55512								0	0	0	0.28772	1	5900	5900		35.618	2.1027	1				61761	4774	41233	41250	69942	69942					0.06871224728752168
VKLWTTKH	8	Unmodified	_VKLWTTKH_					0	0	0		nc|ENSG00000158560|O14576-4|DYNC1I1;nc|ENSG00000158560|O14576-3|DYNC1I1;nc|ENSG00000158560|O14576-5|DYNC1I1;ENSG00000158560|ENST00000447467|DYNC1I1;nc|ENSG00000158560|O14576|DYNC1I1	nc|ENSG00000158560|O14576-4|DYNC1I1	nc|ENSG00000158560|O14576-4|DYNC1I1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.7996826171875	2	506.800552	1011.58655	-0.49674	-0.00025175	1.6185	0.00082027	1.1218	0.00056852	506.8013355229327	46.548	1.4801	46.564	46.121	47.601	0.015511					75	41	2	0	0	0	0.86677	1	3441	3441		27.882	4.8398	1	188180			61762	5488	41234	41251	69943	69943					0.08122056922400134
VKLWTTKH	8	Unmodified	_VKLWTTKH_					0	0	0		nc|ENSG00000158560|O14576-4|DYNC1I1;nc|ENSG00000158560|O14576-3|DYNC1I1;nc|ENSG00000158560|O14576-5|DYNC1I1;ENSG00000158560|ENST00000447467|DYNC1I1;nc|ENSG00000158560|O14576|DYNC1I1	nc|ENSG00000158560|O14576-4|DYNC1I1	nc|ENSG00000158560|O14576-4|DYNC1I1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8031921386719	2	506.800552	1011.58655	-0.48322	-0.00024489	2.0082	0.0010178	1.525	0.00077288	506.8016317865514	54.538	0.54627	54.593	54.355	54.901	0.055614					28	18	2	0	0	0	0.81184	1	4519	4519		19.997	0.6368	1	167240			61763	5488	41234	41251	69944	69944					0.08122056922400134
VKLWTTKH	8	Unmodified	_VKLWTTKH_					0	0	0		nc|ENSG00000158560|O14576-4|DYNC1I1;nc|ENSG00000158560|O14576-3|DYNC1I1;nc|ENSG00000158560|O14576-5|DYNC1I1;ENSG00000158560|ENST00000447467|DYNC1I1;nc|ENSG00000158560|O14576|DYNC1I1	nc|ENSG00000158560|O14576-4|DYNC1I1	nc|ENSG00000158560|O14576-4|DYNC1I1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8018798828125	2	506.800552	1011.58655	0.38439	0.00019481	0.96921	0.00049119	1.3536	0.000686	506.80097431464225	53.444	1.0595	53.515	53.221	54.281	0.070709					58	27	3	0	0	0	0.90089	1	4380	4380		39.253	2.0937	1	177670			61764	5488	41234	41251	69945	69945					0.08122056922400134
VKMCYTSNRLV	11	Unmodified	_VKMCYTSNRLV_					0	0	0			REV__ENSG00000189108|ENST00000372582|IL1RAPL2	REV__ENSG00000189108|ENST00000372582|IL1RAPL2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2578125	3	438.561664	1312.66316	-0.3319	-0.00014556	1.822	0.00079907	1.4901	0.00065351	438.5613336134908	29.763	0.26881	29.72	29.555	29.824	-0.043095					7	5	2	0	0	0	0.17363	1	1586	1586		31.068	0	1	13774	+		61765	23065	41235	41252	69946	69946					0.019337443650783825
VKMGVLSC	8	Unmodified	_VKMGVLSC_					0	0	0			REV__ENST00000521214.5_1_8:48191985-48612988:+|nuORF	REV__ENST00000521214.5_1_8:48191985-48612988:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.9068908691406	2	418.722067	835.429581	0.15388	6.4435E-05	1.4837	0.00062124	1.6375	0.00068567	418.7222996816097	20.076	0.18505	19.446	19.305	19.49	-0.62961					5	3	2	0	0	0	0.4196	1	588	588		12.959	4.7279	1	29917	+		61766	21117	41236	41253	69947	69947					0.005283127162215351
VKMQKQRRREE	11	Unmodified	_VKMQKQRRREE_					0	0	0			REV__ENSG00000089737|ENST00000621632|DDX24	REV__ENSG00000089737|ENST00000621632|DDX24	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.7615966796875	3	496.612298	1486.81506	-1.5502	-0.00076983	-0.8211	-0.00040777	-2.3713	-0.0011776	496.6118736076969	44.112	0.53094	44.957	44.653	45.184	0.84438					20	12	2	0	0	0	0.17863	1	4017	4017		14.086	1.1285	1	370470	+		61767	16975	41237	41254	69948	69948					0.09112861436983621
VKMTPSTKKVF	11	Unmodified	_VKMTPSTKKVF_					0	0	0		nc|ENSG00000131355|Q9BY15-2|ADGRE3;ENSG00000131355|ENST00000253673|ADGRE3	nc|ENSG00000131355|Q9BY15-2|ADGRE3	nc|ENSG00000131355|Q9BY15-2|ADGRE3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.581298828125	3	422.581053	1264.72133	-1.733	-0.00073233	3.9229	0.0016577	2.1899	0.00092541	422.5826240153895	97.352	3.8291	97.583	96.825	100.65	0.23103					216	89	4	0	0	0	0.74763	1	10076	10076		20.315	5.5362	1	506650			61768	3722	41238	41255	69949	69949					0.09955749281994031
VKMTSAFLA	9	Unmodified	_VKMTSAFLA_					0	0	0		ENST00000555447.5_1_14:81864725-81864872:-|nuORF	ENST00000555447.5_1_14:81864725-81864872:-|nuORF	ENST00000555447.5_1_14:81864725-81864872:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2688903808594	2	484.267696	966.520839	-0.72153	-0.00034941	0.71195	0.00034477	-0.0095803	-4.6394E-06	484.2678176042994	59.266	0.30511	59.819	59.733	60.038	0.55323					13	7	2	0	0	0	0.77696	1	6256	6256		31.53	1.0262	1	2386200			61769	13733	41239	41256	69950	69950					0.03623899685203469
VKNESELTKL	10	Unmodified	_VKNESELTKL_					0	0	0			REV__nc|ENSG00000239961|P59901-2|LILRA4	REV__nc|ENSG00000239961|P59901-2|LILRA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8314208984375	2	580.829703	1159.64485	-1.9881	-0.0011547	3.2987	0.001916	1.3107	0.00076128	580.8312794976786	59.527	0.91995	59.918	59.525	60.445	0.39077					48	22	3	0	0	0	0.21012	1	6288	6288		83.647	0	1	1069200	+		61770	23809	41240	41257	69951	69951					0.07141648986385007
VKNESELTKL	10	Unmodified	_VKNESELTKL_					0	0	0			REV__nc|ENSG00000239961|P59901-2|LILRA4	REV__nc|ENSG00000239961|P59901-2|LILRA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8320922851562	2	580.829703	1159.64485	-1.0916	-0.00063402	2.1904	0.0012723	1.0989	0.00063826	580.8307679449848	59.536	0.88874	60.089	59.574	60.463	0.55323					49	22	3	0	0	0	0.19099	1	6275	6275		88.177	3.0161	1	1358100	+		61771	23809	41240	41257	69952	69952					0.07141648986385007
VKNGAQRP	8	Unmodified	_VKNGAQRP_					0	0	0		ENSG00000198822|ENST00000361669|GRM3	ENSG00000198822|ENST00000361669|GRM3	ENSG00000198822|ENST00000361669|GRM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2515869140625	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.86288	2	7869	7847;7869		33.516	6.7195	1	3292300			61772	8343	41241	41258	69953;69954	69954					0.04839453677379879
VKNGGELTHP	10	Unmodified	_VKNGGELTHP_					0	0	0		ENST00000521713.1_1_7:6179681-6199085:+|nuORF;ENSG00000106346|ENST00000306177|USP42;nc|ENSG00000106346|Q9H9J4|USP42;ENST00000479544.6_1_7:6150764-6196715:+|nuORF	ENST00000521713.1_1_7:6179681-6199085:+|nuORF	ENST00000521713.1_1_7:6179681-6199085:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.81005859375	2	526.28018	1050.54581	-0.10947	-5.7612E-05	-4.4553	-0.0023447	-4.5648	-0.0024024	526.2768526776432	98.293	0.6677	98.521	98.17	98.838	0.22787					25	14	3	0	0	0	0.37624	1	10213	10213		56.721	15.943	1	43316			61773	2291	41242	41259	69955	69955					0.022556708121328484
VKNLEPIREIL	11	Unmodified	_VKNLEPIREIL_					0	0	0			REV__chr3:196074125-196077064|44|10.11|0.63|4.01|-|ENST00000420415|TFRC,TFRC	REV__chr3:196074125-196077064|44|10.11|0.63|4.01|-|ENST00000420415|TFRC,TFRC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9401550292969	3	441.938005	1322.79219	0.34059	0.00015052	3.6789	0.0016258	4.0195	0.0017764	441.939508619888	56.282	0.57769	56.381	55.87	56.448	0.099186					56	26	3	0	0	0	0.7896	1	4725	4725		13.508	1.5756	1	966620	+		61774	15806	41243	41260	69956	69956					0.1437016559118547
VKNLIKRLDVY	11	Unmodified	_VKNLIKRLDVY_					0	0	0		ENST00000341285.7_2_4:15614032-15626959:-|nuORF	ENST00000341285.7_2_4:15614032-15626959:-|nuORF	ENST00000341285.7_2_4:15614032-15626959:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	454.28143310546875	3	454.281883	1359.82382	-2.0728	-0.00094166	-0.17635	-8.0113E-05	-2.2492	-0.0010218	454.28190906075935	26.626	0.68375	26.626	26.315	26.999	0					46	30	2	0	0	0	0.76892	1	1023	1023		17.833	2.4957	1	52908			61775	10245	41244	41261	69957	69957					0.158301583451248
VKNLIKRLDVY	11	Unmodified	_VKNLIKRLDVY_					0	0	0		ENST00000341285.7_2_4:15614032-15626959:-|nuORF	ENST00000341285.7_2_4:15614032-15626959:-|nuORF	ENST00000341285.7_2_4:15614032-15626959:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	454.281883	1359.82382	0.085386	3.8789E-05	-2.6556	-0.0012064	-2.5703	-0.0011676	454.28074005654065	26.214	0.53523	26.319	25.993	26.528	0.10541	-0.11357	-0.0018223	NaN	17.833	35	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63746			61776	10245	41244	41261							0.158301583451248
VKNLIKRLDVY	11	Unmodified	_VKNLIKRLDVY_					0	0	0		ENST00000341285.7_2_4:15614032-15626959:-|nuORF	ENST00000341285.7_2_4:15614032-15626959:-|nuORF	ENST00000341285.7_2_4:15614032-15626959:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	454.281883	1359.82382	0.43361	0.00019698	-2.1757	-0.0009884	-1.7421	-0.00079142	454.2807888724877	26.325	0.47981	26.353	25.991	26.471	0.02817	-0.079779	-0.0011683	NaN	17.833	39	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103780			61777	10245	41244	41261							0.158301583451248
VKNPLCPLG	9	Unmodified	_VKNPLCPLG_					0	0	0		ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.76861572265625	2	470.767863	939.521173	-1.6346	-0.00076952	4.2064	0.0019802	2.5717	0.0012107	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.72402	1	4148	4148		38.806	6.8513	1	1359900			61778	6555	41245	41262	69958	69958					0.048993194050581224
VKNTLTLLH	9	Unmodified	_VKNTLTLLH_					0	0	0			REV__chrX:56787161-56817320|20|61.1|0.55|6.79|+|2|None,NBDY|1	REV__chrX:56787161-56817320|20|61.1|0.55|6.79|+|2|None,NBDY|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.818603515625	2	519.818941	1037.62333	-0.067594	-3.5137E-05	-1.1183	-0.00058132	-1.1859	-0.00061646	519.8182715270425	84.44	1.4919	84.888	84.056	85.547	0.44736					111	36	4	0	0	0	0.22631	1	9887	9887		71.296	2.811	1	7125200	+		61779	15953	41246	41263	69959	69959					0.10602308748320866
VKPAKYGWPV	10	Unmodified	_VKPAKYGWPV_					0	0	0			REV__chr6:70035939-70068423|26|51.77|0.77|6.08|+|1|COL19A1,COL19A1|1	REV__chr6:70035939-70068423|26|51.77|0.77|6.08|+|1|COL19A1,COL19A1|1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	572.8269653320312	2	572.829309	1143.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.796	1	16.796	16.296	17.296	0								0	0	0	0.45132	1	157	157		29.15	3.5755	1		+		61780	15885	41247	41264	69960	69960					0.07798899127988079
VKPDTAATIH	10	Unmodified	_VKPDTAATIH_					0	0	0			REV__ENSG00000164061|ENST00000296452|BSN	REV__ENSG00000164061|ENST00000296452|BSN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.807861328125	2	526.790381	1051.56621	1.937	0.0010204	2.7602	0.001454	4.6971	0.0024744	526.7918472729	99.192	0.34617	99.555	99.329	99.676	0.36292					11	8	2	0	0	0	0.37624	1	12006	12006		71.877	25.905	1	262240	+		61781	21019	41248	41265	69961	69961					0.04248841471940068
VKPHSVQIRGT	11	Unmodified	_VKPHSVQIRGT_					0	0	0		chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3545532226562	2	611.356754	1220.69895	-0.25906	-0.00015838	-0.90242	-0.0005517	-1.1615	-0.00071008	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.7434	1	9236	9236		23.523	1.5628	1	3360200			61782	232	41249	41266	69962	69962					0.09743285928584555
VKPHSVQIRGT	11	Unmodified	_VKPHSVQIRGT_					0	0	0		chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3555908203125	2	611.356754	1220.69895	-0.40504	-0.00024762	-0.069959	-4.277E-05	-0.475	-0.00029039	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.67778	1	10029	10029		35.152	3.6222	1	12417000			61783	232	41249	41266	69963	69963					0.09743285928584555
VKPHSVQIRGT	11	Unmodified	_VKPHSVQIRGT_					0	0	0		chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3539428710938	2	611.356754	1220.69895	-1.2523	-0.00076561	-0.012793	-7.8212E-06	-1.2651	-0.00077343	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.7434	1	9378	9378		23.523	0	1	5978100			61784	232	41249	41266	69964	69964					0.09743285928584555
VKPHSVQIRGT	11	Unmodified	_VKPHSVQIRGT_					0	0	0		chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3551635742188	2	611.356754	1220.69895	1.8406	0.0011253	-2.148	-0.0013132	-0.3074	-0.00018793	611.3554755611618	95.715	4.0888	96.135	95.146	99.235	0.42051					346	99	4	0	0	0	0.638	2	11446	11422;11446		40.058	9.7405	1	11372000			61785	232	41249	41266	69965;69966	69966					0.09743285928584555
VKPHSVQIRGT	11	Unmodified	_VKPHSVQIRGT_					0	0	0		chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	chr17:47661178-47668186|27|15.3|0.37|5.36|+|1|KPNB1,KPNB1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.35400390625	2	611.356754	1220.69895	0.93149	0.00056947	-1.1574	-0.00070761	-0.22595	-0.00013814	611.3560842580883	95.783	3.9941	96.187	95.298	99.293	0.40451					337	97	4	0	0	0	0.70737	1	11431	11431		30.318	6.795	1	11629000			61786	232	41249	41266	69967	69967					0.09743285928584555
VKPKAAKPK	9	Unmodified	_VKPKAAKPK_					0	0	0		ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2	REV__ENSG00000187837|ENST00000343677|H1-2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.8270263671875	2	483.826569	965.638586	0.68619	0.000332	-0.41613	-0.00020133	0.27006	0.00013066	483.8263157791893	16.113	0.20814	15.626	15.531	15.739	-0.48718					7	4	2	0	0	0	0.51307	1	93	93		51.335	20.832	1	41204			61787	22956;7602;7888	41250	41267	69968	69968					0.1543922033616809
VKPKKIKG	8	Unmodified	_VKPKKIKG_					0	0	0			REV__ENSG00000039139|ENST00000265104|DNAH5	REV__ENSG00000039139|ENST00000265104|DNAH5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.3141784667969	2	449.315838	896.617122	0.030616	1.3756E-05	-2.674	-0.0012015	-2.6434	-0.0011877	449.3144775449266	21.709	1.5646	21.081	20.162	21.727	-0.62835					91	40	3	0	0	0	0.85277	1	804	804		25.45	4.9683	1	615330	+		61788	16310	41251	41268	69969	69969					0.16467835307469159
VKPKKRVSS	9	Unmodified	_VKPKKRVSS_					0	0	0			REV__ENSG00000067334|ENST00000436063|DNTTIP2	REV__ENSG00000067334|ENST00000436063|DNTTIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.8324584960938	2	514.832383	1027.65021	1.0308	0.00053067	-0.97324	-0.00050106	0.057527	2.9617E-05	514.8316185932387	20.597	0.45096	20.138	19.915	20.366	-0.4591					20	9	3	0	0	0	0.78058	1	667	667		30.504	1.3541	1	92510	+		61789	16541	41252	41269	69970	69970					0.13749417359508698
VKPKMKRVKRF	11	Unmodified	_VKPKMKRVKRF_					0	0	0		ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.97113037109375	3	472.970986	1415.89113	-1.6394	-0.00077538	1.6537	0.00078215	0.014314	6.7703E-06	472.9717127008119	49.434	3.3366	49.434	48.538	51.875	0					243	82	4	0	0	0	0.78683	3	3900	3900;3948;3984		14.086	4.4399	1	1017000			61790	11511	41253	41270	69971;69972;69973	69971					0.19981910075080123
VKPKMKRVKRF	11	Unmodified	_VKPKMKRVKRF_					0	0	0		ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.970703125	3	472.970986	1415.89113	0.051384	2.4303E-05	-0.19839	-9.3831E-05	-0.147	-6.9528E-05	472.97087077601634	49.142	2.3722	49.137	48.43	50.803	-0.0056381					193	58	5	0	0	0	0.7896	3	4112	4112;4124;4136		13.508	3.8618	1	1340700			61791	11511	41253	41270	69974;69975;69976	69974					0.19981910075080123
VKPKMKRVKRF	11	Unmodified	_VKPKMKRVKRF_					0	0	0		ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.9707336425781	3	472.970986	1415.89113	-0.70225	-0.00033214	0.5964	0.00028208	-0.10585	-5.0063E-05	472.9712636412795	49.393	3.7524	49.369	48.706	52.459	-0.024033					207	93	4	0	0	0	0.7896	2	4236	4236;4285		13.508	3.8618	1	1446100			61792	11511	41253	41270	69977;69978	69977					0.19981910075080123
VKPKMKRVKRF	11	Unmodified	_VKPKMKRVKRF_					0	0	0		ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.971435546875	3	472.970986	1415.89113	-0.99151	-0.00046896	1.0406	0.00049218	0.0491	2.3223E-05	472.9714128496593	48.869	1.9906	48.895	48.114	50.105	0.025574					169	50	5	0	0	0	0.76892	1	3707	3707		17.833	5.4003	1	1653800			61793	11511	41253	41270	69979	69979					0.19981910075080123
VKPKMKRVKRF	11	Unmodified	_VKPKMKRVKRF_					0	0	0		ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.9707336425781	3	472.970986	1415.89113	0.3106	0.00014691	-0.31693	-0.0001499	-0.006331	-2.9944E-06	473.3050663884793	49.019	2.0636	49.057	48.411	50.474	0.037731					160	51	5	0	0	0	0.76579	4	3797	3733;3750;3784;3797		18.531	8.8849	1	2073100			61794	11511	41253	41270	69980;69981;69982;69983	69983					0.19981910075080123
VKPKMKRVKRF	11	Unmodified	_VKPKMKRVKRF_					0	0	0		ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.9707336425781	3	472.970986	1415.89113	-0.32273	-0.00015264	0.35699	0.00016885	0.034258	1.6203E-05	472.97110855573317	48.963	2.2671	48.87	48.252	50.519	-0.093182					180	57	5	0	0	0	0.76579	3	3745	3745;3757;3814		18.531	4.2961	1	1641600			61795	11511	41253	41270	69984;69985;69986	69984					0.19981910075080123
VKPKMKRVKRF	11	Unmodified	_VKPKMKRVKRF_					0	0	0		ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.97052001953125	3	472.970986	1415.89113	-0.61443	-0.00029061	0.52789	0.00024968	-0.086546	-4.0934E-05	472.9711500191985	46.191	1.1241	46.663	46.09	47.214	0.4714					97	27	5	0	0	0	0.76579	2	4351	4339;4351		18.531	2.6104	1	6530400			61796	11511	41253	41270	69987;69988	69988					0.19981910075080123
VKPKMKRVKRF	11	Unmodified	_VKPKMKRVKRF_					0	0	0		ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.9703369140625	3	472.970986	1415.89113	-1.5017	-0.00071026	1.2351	0.00058416	-0.26661	-0.0001261	472.97146844681254	45.906	1.1209	46.801	46.327	47.448	0.89542					102	27	5	0	0	0	0.76892	4	4316	4304;4316;4339;4383		17.833	8.187	1	9488500			61797	11511	41253	41270	69989;69990;69991;69992	69990					0.19981910075080123
VKPLCCVTIK	10	Carbamidomethyl (C)	_VKPLCC(Carbamidomethyl (C))VTIK_	VKPLC(0.127)C(0.873)VTIK		VKPLC(-8.4)C(8.4)VTIK		0	1	0			REV__chr6:132980986-132986888|32|38.69|0.0|21.88|+|0|LINC00326,None|1	REV__chr6:132980986-132986888|32|38.69|0.0|21.88|+|0|LINC00326,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8300170898438	2	580.830137	1159.64572	-1.0916	-0.00063402	1.4429	0.00083808	0.35132	0.00020406	580.8307679449848	59.536	0.88874	60.089	59.574	60.463	0.55323					49	22	3	0	0	0	0.0353	1	6299	6299		112.41	18.813	2	1358100	+		61798	15873	41254	41271	69993	69993	208				0.0722844883007383
VKPLCCVTIK	10	Carbamidomethyl (C)	_VKPLCC(Carbamidomethyl (C))VTIK_					0	1	0			REV__chr6:132980986-132986888|32|38.69|0.0|21.88|+|0|LINC00326,None|1	REV__chr6:132980986-132986888|32|38.69|0.0|21.88|+|0|LINC00326,None|1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	580.830137	1159.64572	-1.9881	-0.0011547	2.5512	0.0014818	0.56313	0.00032708	580.8312794976786	59.527	0.91995	59.918	59.525	60.445	0.39077	-0.085387	0.00071723	NaN	112.41	48	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1069200	+		61799	15873	41254	41271			208				0.0722844883007383
VKPLHGKFG	9	Unmodified	_VKPLHGKFG_					0	0	0			REV__ENSG00000185567|ENST00000333244|AHNAK2	REV__ENSG00000185567|ENST00000333244|AHNAK2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7952880859375	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.667	1	59.668	59.168	60.168	0.00051117								0	0	0	0.32159	1	5134	5134		23.042	3.6825	1		+		61800	22775	41255	41272	69994	69994					0.08446074267999393
VKPLKILQKCD	11	Unmodified	_VKPLKILQKCD_					0	0	0			REV__ENST00000464038.5_1_2:31155024-31369832:-|nuORF	REV__ENST00000464038.5_1_2:31155024-31369832:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.40478515625	2	642.889041	1283.76353	2.6875	0.0017278	-1.5679	-0.001008	1.1196	0.00071979	643.3908421533285	107.68	0.1733	107.65	107.55	107.73	-0.031494					5	3	2	0	0	0	0.17415	1	11943	11943		15.333	0	1	72994	+		61801	20586	41256	41273	69995	69995					0.13299724690386938
VKPLKQRRLP	10	Unmodified	_VKPLKQRRLP_					0	0	0			REV__ENSG00000244486|ENST00000622235|SCARF2	REV__ENSG00000244486|ENST00000622235|SCARF2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.766845703125	3	412.275063	1233.80336	0.016088	6.6328E-06	-4.2728	-0.0017616	-4.2567	-0.0017549	412.2732224910542	47.919	1.1268	47.91	47.738	48.865	-0.0093231					48	29	2	0	0	0	0.37624	1	4028	4028		19.263	11.863	1	283860	+		61802	23851	41257	41274	69996	69996					0.19581032475980464
VKPLKQRRLP	10	Unmodified	_VKPLKQRRLP_					0	0	0			REV__ENSG00000244486|ENST00000622235|SCARF2	REV__ENSG00000244486|ENST00000622235|SCARF2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2690734863281	3	412.275063	1233.80336	0.82464	0.00033998	-3.4156	-0.0014082	-2.591	-0.0010682	412.60767552711644	38.986	0.16687	38.997	38.935	39.101	0.011173					5	3	2	0	0	0	0.37624	1	2703	2703		6.3209	0	1	26210	+		61803	23851	41257	41274	69997	69997					0.19581032475980464
VKPLPRII	8	Unmodified	_VKPLPRII_					0	0	0			REV__ENSG00000138246|ENST00000260818|DNAJC13	REV__ENSG00000138246|ENST00000260818|DNAJC13	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	468.7376708984375	2	468.323663	934.632772	-0.3888	-0.00018208	0.64524	0.00030218	0.25644	0.0001201	468.3237704911081	74.375	0.59115	74.332	74.124	74.715	-0.043877					25	20	2	0	0	0	0.4196	1	7321	7321		12.959	0	1	42136	+		61804	19452	41258	41275	69998	69998					0.16284121824503472
VKPNGAII	8	Unmodified	_VKPNGAII_					0	0	0		ENSG00000139304|ENST00000644991|PTPRQ;nc|ENSG00000139304|Q9UMZ3|PTPRQ	ENSG00000139304|ENST00000644991|PTPRQ	ENSG00000139304|ENST00000644991|PTPRQ	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2575988769531	2	406.255446	810.496338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.408	1	58.394	57.894	58.894	-0.013641								0	0	0	0.30252	1	5317	5317		19.36	1.0356	1				61805	4360	41259	41276	69999	69999					0.08351007594001203
VKPPQAQTL	9	Unmodified	_VKPPQAQTL_					0	0	0		ENSG00000130950|ENST00000253262|NUTM2F;ENSG00000188152|ENST00000372322|NUTM2G;nc|ENSG00000188152|Q5VZR2-2|NUTM2G	ENSG00000130950|ENST00000253262|NUTM2F	ENSG00000130950|ENST00000253262|NUTM2F	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.2871398925781	2	491.290017	980.565481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.964	1	45.96	45.46	46.46	-0.0041618								0	0	0	0.30778	1	3686	3686		27.882	0	1				61806	3700	41260	41277	70000	70000					0.07442046822893644
VKPRAPNPWL	10	Unmodified	_VKPRAPNPWL_					0	0	0		ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3428955078125	2	589.345658	1176.67676	-0.36759	-0.00021664	-4.217	-0.0024853	-4.5846	-0.0027019	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.86589	1	9370	9370		29.15	0	1	11103000			61807	7840	41261	41278	70001	70001					0.09549106250847217
VKPRAPNPWL	10	Unmodified	_VKPRAPNPWL_					0	0	0		ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3424682617188	2	589.345658	1176.67676	-0.65438	-0.00038565	-4.023	-0.0023709	-4.6774	-0.0027566	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.86718	1	9781	9781		27.882	0.83493	1	16804000			61808	7840	41261	41278	70002	70002					0.09549106250847217
VKPRQGAN	8	Unmodified	_VKPRQGAN_					0	0	0		ENST00000275418.11_1_7:158552249-158552788:-|nuORF	ENST00000275418.11_1_7:158552249-158552788:-|nuORF	ENST00000275418.11_1_7:158552249-158552788:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25262451171875	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87479	1	7683	7683		30.504	3.7075	1	1788100			61809	9595	41262	41279	70003	70003					0.04839453677379879
VKPRQGAN	8	Unmodified	_VKPRQGAN_					0	0	0		ENST00000275418.11_1_7:158552249-158552788:-|nuORF	ENST00000275418.11_1_7:158552249-158552788:-|nuORF	ENST00000275418.11_1_7:158552249-158552788:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2516174316406	2	435.251226	868.487899	-0.16621	-7.2343E-05	0.40306	0.00017543	0.23685	0.00010309	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.884	1	7418	7418		33.516	1.5607	1	768200			61810	9595	41262	41279	70004	70004					0.04839453677379879
VKPRQGAN	8	Unmodified	_VKPRQGAN_					0	0	0		ENST00000275418.11_1_7:158552249-158552788:-|nuORF	ENST00000275418.11_1_7:158552249-158552788:-|nuORF	ENST00000275418.11_1_7:158552249-158552788:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25201416015625	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.89962	1	8113	8113		38.806	0	1	2823900			61811	9595	41262	41279	70005	70005					0.04839453677379879
VKPRQGAN	8	Unmodified	_VKPRQGAN_					0	0	0		ENST00000275418.11_1_7:158552249-158552788:-|nuORF	ENST00000275418.11_1_7:158552249-158552788:-|nuORF	ENST00000275418.11_1_7:158552249-158552788:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2516784667969	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.85277	1	7576	7576		25.45	1.2474	1	3292300			61812	9595	41262	41279	70006	70006					0.04839453677379879
VKPRQGAN	8	Unmodified	_VKPRQGAN_					0	0	0		ENST00000275418.11_1_7:158552249-158552788:-|nuORF	ENST00000275418.11_1_7:158552249-158552788:-|nuORF	ENST00000275418.11_1_7:158552249-158552788:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2513427734375	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87479	1	8325	8325		30.504	3.7075	1	3370400			61813	9595	41262	41279	70007	70007					0.04839453677379879
VKPRVSASSN	10	Unmodified	_VKPRVSASSN_					0	0	0			REV__ENSG00000146072|ENST00000296861|TNFRSF21	REV__ENSG00000146072|ENST00000296861|TNFRSF21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7951049804688	2	522.793455	1043.57236	-0.57986	-0.00030315	4.3573	0.002278	3.7775	0.0019748	522.7958436643665	57.671	0.74409	58.065	57.655	58.399	0.39407					53	18	4	0	0	0	0.85981	1	6022	6022		35.152	0.97948	1	1228100	+		61814	19986	41263	41280	70008	70008					0.052313597034981285
VKPSKKLST	9	Unmodified	_VKPSKKLST_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.30078125	2	494.313492	986.612431	0.99987	0.00049425	2.6961	0.0013327	3.696	0.001827	494.314982692524	97.032	0.27809	97.437	97.339	97.617	0.40498					8	6	2	0	0	0	0.20789	1	11668	11668		26.693	0	1	128810	+		61815	23285	41264	41281	70009	70009					0.11858906374038725
VKPSKKLST	9	Unmodified	_VKPSKKLST_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.30078125	2	494.313492	986.612431	1.0095	0.00049901	-2.484	-0.0012279	-1.4745	-0.00072885	494.31158296157173	97.234	0.20412	97.639	97.496	97.7	0.40498					6	4	2	0	0	0	0.20789	1	11668	11668		26.693	0	1	169440	+		61816	23285	41264	41281	70010	70010					0.11858906374038725
VKPTNKLHER	10	Unmodified	_VKPTNKLHER_					0	0	0			REV__ENSG00000163510|ENST00000410053|CWC22	REV__ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3558349609375	2	611.356754	1220.69895	-0.40504	-0.00024762	-0.069959	-4.277E-05	-0.475	-0.00029039	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.82886	1	10089	10089		37.812	9.73	1	12417000	+		61817	20926	41265	41282	70011	70011					0.09743285928584555
VKPTNKLHER	10	Unmodified	_VKPTNKLHER_					0	0	0			REV__ENSG00000163510|ENST00000410053|CWC22	REV__ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3558349609375	2	611.356754	1220.69895	2.4219	0.0014807	-3.0766	-0.0018809	-0.65465	-0.00040023	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.86471	1	10241	10241		30.318	3.6248	1	12656000	+		61818	20926	41265	41282	70012	70012					0.09743285928584555
VKPTNKLHER	10	Unmodified	_VKPTNKLHER_					0	0	0			REV__ENSG00000163510|ENST00000410053|CWC22	REV__ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.8576049804688	2	611.356754	1220.69895	0.21646	0.00013233	-0.8106	-0.00049557	-0.59414	-0.00036323	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.77314	2	10346	10085;10346		40.778	4.7437	1	12399000	+		61819	20926	41265	41282	70013;70014	70014					0.09743285928584555
VKPTNKLHER	10	Unmodified	_VKPTNKLHER_					0	0	0			REV__ENSG00000163510|ENST00000410053|CWC22	REV__ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3554077148438	2	611.356754	1220.69895	1.142	0.00069816	-1.5619	-0.00095487	-0.4199	-0.00025671	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.8651	1	9767	9767		25.574	2.0514	1	17478000	+		61820	20926	41265	41282	70015	70015					0.09743285928584555
VKPTNKLHER	10	Unmodified	_VKPTNKLHER_					0	0	0			REV__ENSG00000163510|ENST00000410053|CWC22	REV__ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3554077148438	2	611.356754	1220.69895	0.8676	0.00053041	-1.2868	-0.00078671	-0.41922	-0.00025629	611.3560720152175	95.924	5.0581	96.087	95.071	100.13	0.16317					363	118	6	0	0	0	0.86763	1	9787	9787		26.693	1.1189	1	16539000	+		61821	20926	41265	41282	70016	70016					0.09743285928584555
VKPTNKLHER	10	Unmodified	_VKPTNKLHER_					0	0	0			REV__ENSG00000163510|ENST00000410053|CWC22	REV__ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3555297851562	2	611.356754	1220.69895	-1.2523	-0.00076562	0.84173	0.0005146	-0.41059	-0.00025102	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.85981	2	9729	9729;9741		35.152	3.6222	1	16503000	+		61822	20926	41265	41282	70017;70018	70017					0.09743285928584555
VKPTNKLHER	10	Unmodified	_VKPTNKLHER_					0	0	0			REV__ENSG00000163510|ENST00000410053|CWC22	REV__ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	611.3541259765625	2	611.356754	1220.69895	1.8406	0.0011253	-2.148	-0.0013132	-0.3074	-0.00018793	611.3554755611618	95.715	4.0888	96.135	95.146	99.235	0.42051					346	99	4	0	0	0	0.86348	1	11363	11363		31.53	0	1	11372000	+		61823	20926	41265	41282	70019	70019					0.09743285928584555
VKPVTREIVIR	11	Unmodified	_VKPVTREIVIR_					0	0	0		nc|ENSG00000164776|Q16816-2|PHKG1;ENSG00000164776|ENST00000297373|PHKG1	nc|ENSG00000164776|Q16816-2|PHKG1	nc|ENSG00000164776|Q16816-2|PHKG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2848815917969	3	437.281995	1308.82415	0.40066	0.0001752	-2.0382	-0.00089127	-1.6375	-0.00071607	437.28102098408925	19.05	0.386	18.42	18.28	18.666	-0.6296					12	8	2	0	0	0	0.79716	1	469	469		11.932	1.3456	1	53531			61824	6002	41266	41283	70020	70020					0.1820957806496608
VKPVTREIVIR	11	Unmodified	_VKPVTREIVIR_					0	0	0		nc|ENSG00000164776|Q16816-2|PHKG1;ENSG00000164776|ENST00000297373|PHKG1	nc|ENSG00000164776|Q16816-2|PHKG1	nc|ENSG00000164776|Q16816-2|PHKG1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	437.281995	1308.82415	0.38417	0.00016799	-2.7698	-0.0012112	-2.3857	-0.0010432	437.28083203253135	18.858	0.33807	18.381	18.218	18.556	-0.47694	-0.01988	-0.00020644	NaN	11.932	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32671			61825	6002	41266	41283							0.1820957806496608
VKQEEPVQIKR	11	Unmodified	_VKQEEPVQIKR_					0	0	0			REV__ENST00000594723.1_1_19:49136676-49136928:-|nuORF	REV__ENST00000594723.1_1_19:49136676-49136928:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.26690673828125	3	451.933143	1352.7776	1.2214	0.000552	-2.2747	-0.001028	-1.0533	-0.000476	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.75121	1	10751	10751		21.78	0.094677	1	1043200	+		61826	29239	41267	41284	70021	70021					0.11532093442997393
VKQGEEDEEG	10	Unmodified	_VKQGEEDEEG_					0	0	0			REV__ENSG00000163510|ENST00000410053|CWC22	REV__ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.24462890625	2	560.243657	1118.47276	0.98186	0.00055008	0.35818	0.00020067	1.34	0.00075075	560.2437469662866	27.215	0.57136	27.188	26.893	27.464	-0.027706					29	15	2	0	0	0	0.37206	1	1224	1224		66.429	0	1	74056	+		61827	20926	41268	41285	70022	70022					-0.08173547491810496
VKQKPRLRIP	10	Unmodified	_VKQKPRLRIP_					0	0	0		ENST00000530083.1_1_11:777645-783680:+|nuORF	ENST00000530083.1_1_11:777645-783680:+|nuORF	ENST00000530083.1_1_11:777645-783680:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7658386230469	3	412.275063	1233.80336	0.12377	5.1027E-05	-2.89	-0.0011915	-2.7662	-0.0011404	412.2739304111319	60.308	0.32982	60.276	60.066	60.396	-0.031731					14	8	2	0	0	0	0.37624	1	5692	5692		11.636	0	1	88379			61828	13339	41269	41286	70023	70023					0.19581032475980464
VKQKPRLRIP	10	Unmodified	_VKQKPRLRIP_					0	0	0		ENST00000530083.1_1_11:777645-783680:+|nuORF	ENST00000530083.1_1_11:777645-783680:+|nuORF	ENST00000530083.1_1_11:777645-783680:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	412.275063	1233.80336	-0.18895	-7.79E-05	-3.2156	-0.0013257	-3.4045	-0.0014036	412.27364235242993	60.681	0.81746	60.669	60.002	60.82	-0.012203	0.11439	0.00051992	NaN	11.636	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60078			61829	13339	41269	41286							0.19581032475980464
VKQKPRLRIP	10	Unmodified	_VKQKPRLRIP_					0	0	0		ENST00000530083.1_1_11:777645-783680:+|nuORF	ENST00000530083.1_1_11:777645-783680:+|nuORF	ENST00000530083.1_1_11:777645-783680:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	412.275063	1233.80336	0.37048	0.00015274	-4.5631	-0.0018812	-4.1926	-0.0017285	412.2730927487452	60.601	0.4523	60.718	60.356	60.809	0.11676	0.16392	-0.0011467	NaN	11.636	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110070			61830	13339	41269	41286							0.19581032475980464
VKQSCCRDCF	10	Unmodified	_VKQSCCRDCF_					0	0	0			REV__ENST00000553724.1_1_14:104193947-104195573:+|nuORF	REV__ENST00000553724.1_1_14:104193947-104195573:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	594.7493896484375	2	594.751561	1187.48857	-1.7929	-0.0010663	-2.2947	-0.0013648	-4.0877	-0.0024311	594.7500749736099	45.235	1.1305	45.231	44.576	45.706	-0.0041618					61	25	3	0	0	0	0.86348	1	3580	3580		31.53	3.6476	1	279020	+		61831	17214	41270	41287	70024	70024					-0.0976757905177692
VKQSHYLG	8	Unmodified	_VKQSHYLG_					0	0	0			REV__ENSG00000182631|ENST00000330120|RXFP3	REV__ENSG00000182631|ENST00000330120|RXFP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2534484863281	2	466.253434	930.492316	-1.4677	-0.00068433	2.1004	0.00097932	0.63267	0.00029498	466.2543190866504	60.961	1.1333	60.992	59.95	61.083	0.0312					73	35	3	0	0	0	0.90465	1	5683	5683		40.573	8.6178	1	265390	+		61832	22538	41271	41288	70025	70025					0.02428918100270039
VKQWKVEKTN	10	Unmodified	_VKQWKVEKTN_					0	0	0			REV__ENSG00000135845|ENST00000344529|PIGC	REV__ENSG00000135845|ENST00000344529|PIGC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.5755920410156	3	420.575067	1258.70337	2.2578	0.00094957	-1.5513	-0.00065242	0.70654	0.00029715	420.57436273463946	46.941	0.83286	46.937	46.593	47.426	-0.0041618					58	20	4	0	0	0	0.86409	1	3840	3840		25.126	0.89417	1	858330	+		61833	19259	41272	41289	70026	70026					0.08436750351506817
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7953796386719	2	491.795269	981.575986	-1.6029	-0.00078829	2.358	0.0011597	0.75513	0.00037137	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.81897	2	3377	3298;3377		34.173	8.5985	1	603870			61834	2499	41273	41290	70027;70028	70028					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7955627441406	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.86677	6	3559	3472;3524;3535;3547;3559;3581		40.778	11.629	1	2891800			61835	2499	41273	41290	70029;70030;70031;70032;70033;70034	70033					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.795654296875	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.79929	13	3989	3727;3738;3759;3771;3784;3815;3824;3836;3882;3893;3978;3989;4125		53.351	19.836	1	1240000			61836	2499	41273	41290	70035;70036;70037;70038;70039;70040;70041;70042;70043;70044;70045;70046;70047	70046					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79620361328125	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.87064	2	4306	4254;4306		34.173	2.2177	1	781720			61837	2499	41273	41290	70048;70049	70049					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958068847656	2	491.795269	981.575986	-1.4502	-0.0007132	2.5925	0.001275	1.1423	0.00056177	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.80959	2	4705	4705;4782		27.882	3.6795	1	1043600			61838	2499	41273	41290	70050;70051	70050					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7958068847656	2	491.795269	981.575986	0.21767	0.00010705	0.41627	0.00020472	0.63394	0.00031177	491.79537288056144	45.526	1.3498	45.507	44.705	46.055	-0.018581					75	31	3	0	0	0	0.90523	1	3600	3600		40.778	10.937	1	529090			61839	2499	41273	41290	70052	70052					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7960205078125	2	491.795269	981.575986	0.16895	8.3091E-05	0.70742	0.00034791	0.87638	0.000431	491.795491652363	46.653	1.8507	46.639	45.976	47.827	-0.013821					152	52	4	0	0	0	0.82658	6	3677	3677;3749;3759;3768;3812;3823		42.396	10.441	1	2674700			61840	2499	41273	41290	70053;70054;70055;70056;70057;70058	70053					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7950439453125	2	491.795269	981.575986	0.09879	4.8585E-05	0.95013	0.00046727	1.0489	0.00051585	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.82658	8	4260	3991;4027;4051;4064;4076;4160;4260;4282		42.396	10.168	1	1349600			61841	2499	41273	41290	70059;70060;70061;70062;70063;70064;70065;70066	70065					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7954406738281	2	491.795269	981.575986	0.019467	9.5736E-06	1.1365	0.00055891	1.1559	0.00056849	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.8621	2	4337	4337;4454		34.173	2.4902	1	310050			61842	2499	41273	41290	70067;70068	70067					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79595947265625	2	491.795269	981.575986	-0.0088364	-4.3457E-06	1.0535	0.0005181	1.0447	0.00051376	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.8537	2	4550	4550;4794		26.693	2.4902	1	782460			61843	2499	41273	41290	70069;70070	70069					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7959289550781	2	491.795269	981.575986	-0.035071	-1.7248E-05	1.1757	0.00057819	1.1406	0.00056094	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.82658	10	4929	4864;4884;4905;4917;4929;4940;4951;4961;4980;5008		44.117	18.193	1	1625300			61844	2499	41273	41290	70071;70072;70073;70074;70075;70076;70077;70078;70079;70080	70075					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7964172363281	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.016	1	57.004	56.504	57.504	-0.012203								0	0	0	0.29508	1	5134	5134		26.693	1.2427	1				61845	2499	41273	41290	70081	70081					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79669189453125	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.656	1	59.643	59.143	60.143	-0.013729								0	0	0	0.29508	1	5483	5483		26.693	3.6504	1				61846	2499	41273	41290	70082	70082					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7960510253906	2	491.795269	981.575986	-0.86128	-0.00042357	1.3952	0.00068615	0.53392	0.00026258	491.79583711541846	45.285	1.262	45.254	44.708	45.97	-0.031067					74	28	3	0	0	0	0.82658	1	3689	3689		21.96	2.5999	1	480390			61847	2499	41273	41290	70083	70083					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7957458496094	2	491.795269	981.575986	-0.75954	-0.00037354	1.5722	0.0007732	0.81265	0.00039966	491.7959244094971	46.601	1.9125	46.572	45.843	47.756	-0.028782					158	52	4	0	0	0	0.83456	3	3836	3836;3847;3965		60.972	34.176	1	3015000			61848	2499	41273	41290	70084;70085;70086	70084					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79583740234375	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.8537	5	4080	4056;4080;4152;4202;4238		40.778	15.328	1	1111900			61849	2499	41273	41290	70087;70088;70089;70090;70091	70088					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79559326171875	2	491.795269	981.575986	-0.64291	-0.00031618	1.7291	0.00085035	1.0862	0.00053417	491.79609453871643	50.642	0.51759	50.619	50.252	50.77	-0.02343					22	13	2	0	0	0	0.90983	1	4391	4391		42.396	10.441	1	333610			61850	2499	41273	41290	70092	70092					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7957763671875	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.82658	2	4572	4572;4664		32.812	7.3622	1	792830			61851	2499	41273	41290	70093;70094	70093					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7958679199219	2	491.795269	981.575986	-0.36021	-0.00017715	1.3022	0.0006404	0.94195	0.00046325	491.79587618632917	55.368	1.5692	55.341	54.702	56.271	-0.027279					123	47	4	0	0	0	0.86677	1	5127	5127		27.882	3.6795	1	1374900			61852	2499	41273	41290	70095	70095					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7954406738281	2	491.795269	981.575986	-2.0246	-0.0009957	2.587	0.0012723	0.56235	0.00027656	491.79643169128343	45.478	1.3283	45.474	44.66	45.989	-0.0041618					90	30	4	0	0	0	0.80959	1	3579	3579		15.642	2.6826	1	433340			61853	2499	41273	41290	70096	70096					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7962341308594	2	491.795269	981.575986	-1.7512	-0.00086123	2.5855	0.0012715	0.83426	0.00041029	491.7964390230398	46.729	1.8976	46.725	45.989	47.886	-0.0041618					167	54	4	0	0	0	0.81897	3	3901	3766;3813;3901		32.812	4.5581	1	2627300			61854	2499	41273	41290	70097;70098;70099	70099					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7955322265625	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.81897	5	4078	4042;4054;4078;4113;4137		42.396	10.441	1	1232600			61855	2499	41273	41290	70100;70101;70102;70103;70104	70102					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7959899902344	2	491.795269	981.575986	-1.7961	-0.00088329	2.9764	0.0014638	1.1803	0.00058047	491.7966581870457	51.567	1.6539	51.579	50.697	52.351	0.012436					117	46	3	0	0	0	0.8347	2	4458	4403;4458		27.882	2.4321	1	354980			61856	2499	41273	41290	70105;70106	70106					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7965393066406	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.86677	1	4527	4527		27.882	9.5578	1	703950			61857	2499	41273	41290	70107	70107					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7957458496094	2	491.795269	981.575986	-2.0878	-0.0010268	2.9764	0.0014638	0.88855	0.00043698	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.8621	4	4956	4944;4956;4968;5001		37.159	10.363	1	1484300			61858	2499	41273	41290	70108;70109;70110;70111	70109					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957458496094	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.86677	4	3487	3396;3424;3436;3487		35.618	10.168	1	2747400			61859	2499	41273	41290	70112;70113;70114;70115	70115					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7959899902344	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.79929	4	3838	3657;3697;3762;3838		37.159	11.416	1	1219600			61860	2499	41273	41290	70116;70117;70118;70119	70119					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7962341308594	2	491.795269	981.575986	-0.71044	-0.00034939	1.6504	0.00081164	0.93993	0.00046225	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.88601	1	4063	4063		34.173	2.2177	1	571510			61861	2499	41273	41290	70120	70120					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958679199219	2	491.795269	981.575986	-0.70147	-0.00034498	1.8729	0.00092111	1.1715	0.00057613	491.79612454848734	55.147	1.9972	55.211	54.439	56.437	0.063725					196	76	4	0	0	0	0.81897	1	4574	4574		20.947	2.6225	1	1759500			61862	2499	41273	41290	70121	70121					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79595947265625	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.88185	2	3417	3386;3417		37.159	8.6097	1	3201400			61863	2499	41273	41290	70122;70123	70123					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7967224121094	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.82658	5	3641	3641;3663;3674;3798;3900		34.173	7.4472	1	1346800			61864	2499	41273	41290	70124;70125;70126;70127;70128	70124					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7962646484375	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.84341	4	4738	4590;4611;4632;4738		27.882	6.1799	1	2075300			61865	2499	41273	41290	70129;70130;70131;70132	70132					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957458496094	2	491.795269	981.575986	0.39746	0.00019547	1.1003	0.00054113	1.4978	0.0007366	491.7957851283323	56.607	1.0536	56.706	56.448	57.502	0.099186					72	48	2	0	0	0	0.8621	3	4767	4767;4775;4809		53.351	16.192	1	1076800			61866	2499	41273	41290	70133;70134;70135	70133					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7965087890625	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.836	1	62.957	62.457	63.457	0.1209								0	0	0	0.29871	1	5490	5490		23.042	5.6775	1				61867	2499	41273	41290	70136	70136					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79461669921875	2	491.795269	981.575986	-0.12437	-6.1163E-05	0.93789	0.00046125	0.81352	0.00040009	491.7955803973609	45.417	1.3583	45.348	44.556	45.914	-0.06863					81	33	3	0	0	0	0.84341	1	3272	3272		24.203	3.7209	1	439300			61868	2499	41273	41290	70137	70137					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79571533203125	2	491.795269	981.575986	-0.17405	-8.5598E-05	1.0809	0.00053159	0.90686	0.00044599	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.84341	3	3382	3382;3434;3505		35.618	5.0535	1	2994900			61869	2499	41273	41290	70138;70139;70140	70138					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.795654296875	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.86677	4	3751	3686;3751;3798;3877		35.618	10.168	1	1502200			61870	2499	41273	41290	70141;70142;70143;70144	70142					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79583740234375	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.87479	1	4167	4167		30.504	1.3541	1	412030			61871	2499	41273	41290	70145	70145					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7965087890625	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.86677	3	4578	4578;4607;4617		29.15	9.7896	1	1898900			61872	2499	41273	41290	70146;70147;70148	70146					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79559326171875	2	491.795269	981.575986	-0.53143	-0.00026136	1.9035	0.00093611	1.372	0.00067476	491.79619139735206	56.69	1.2684	56.664	56.294	57.562	-0.026108					93	62	2	0	0	0	0.79929	1	4790	4790		18.324	0.95945	1	1036100			61873	2499	41273	41290	70149	70149					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7919921875	2	491.795269	981.575986	-1.178	-0.00057935	-0.11787	-5.7967E-05	-1.2959	-0.00063732	491.79505307157757	43.662	1.2118	44.112	43.311	44.523	0.45025					60	29	3	0	0	0	0.86677	1	3983	3983		27.882	3.6795	1	1655700			61874	2499	41273	41290	70150	70150					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7956237792969	2	491.795269	981.575986	-1.0095	-0.00049646	1.2929	0.00063585	0.28344	0.00013939	491.79577391563464	44.834	1.3425	45.297	44.375	45.717	0.46313					102	32	4	0	0	0	0.88601	2	4177	4076;4177		56.721	10.769	1	7709100			61875	2499	41273	41290	70151;70152	70152					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7956237792969	2	491.795269	981.575986	-1.0684	-0.00052544	1.9332	0.00095072	0.86475	0.00042528	491.7960749594644	45.401	0.52972	45.865	45.676	46.205	0.46313					42	12	4	0	0	0	0.87064	1	4244	4244		29.15	0.89528	1	5204000			61876	2499	41273	41290	70153	70153					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7948913574219	2	491.795269	981.575986	-1.1725	-0.00057664	2.0381	0.0010023	0.86553	0.00042567	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.8347	3	4384	4315;4384;4412		32.812	3.6825	1	3001500			61877	2499	41273	41290	70154;70155;70156	70155					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7957458496094	2	491.795269	981.575986	-0.48962	-0.00024079	1.5802	0.00077716	1.0906	0.00053636	491.7959072795416	52.767	1.4912	53.191	52.596	54.087	0.42348					103	35	4	0	0	0	0.87064	1	5292	5292		29.15	4.9468	1	2146400			61878	2499	41273	41290	70157	70157					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79010009765625	2	491.795269	981.575986	-1.9178	-0.00094317	0.68391	0.00033634	-1.2339	-0.00060683	491.795512765235	43.373	1.1256	44.147	43.54	44.665	0.77379					67	27	3	0	0	0	0.86677	1	3917	3917		27.882	9.5578	1	1540600			61879	2499	41273	41290	70158	70158					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7961120605469	2	491.795269	981.575986	-1.2395	-0.00060959	1.4172	0.00069695	0.17764	8.7362E-05	491.7958275421146	44.647	1.7443	45.492	44.612	46.357	0.84437					115	42	4	0	0	0	0.8621	3	4047	4047;4071;4099		40.778	8.8222	1	6753400			61880	2499	41273	41290	70159;70160;70161	70159					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.796142578125	2	491.795269	981.575986	-0.91317	-0.00044909	1.7019	0.00083701	0.78877	0.00038791	491.79595933805444	45.694	2.2667	46.589	46.327	48.594	0.89542					151	55	4	0	0	0	0.8537	3	4364	4246;4292;4364		34.173	9.9698	1	3110500			61881	2499	41273	41290	70162;70163;70164	70164					0.08446074267999393
VKRAFFSK	8	Unmodified	_VKRAFFSK_					0	0	0		ENST00000535246.1_3_11:63999367-63999984:+|nuORF;ENST00000537109.1_1_11:63999298-63999511:+|nuORF;ENST00000542376.5_1_11:63999367-64000338:+|nuORF;ENST00000543791.5_1_11:63999367-64000338:+|nuORF;ENSG00000110011|ENST00000628077|DNAJC4	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	ENST00000535246.1_3_11:63999367-63999984:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79571533203125	2	491.795269	981.575986	-0.16137	-7.9361E-05	1.242	0.0006108	1.0806	0.00053144	491.795730554191	52.394	1.7298	53.062	52.517	54.247	0.6673					112	41	4	0	0	0	0.86677	2	5270	5270;5282		27.882	3.6795	1	2437000			61882	2499	41273	41290	70165;70166	70165					0.08446074267999393
VKRGAVNIS	9	Unmodified	_VKRGAVNIS_					0	0	0		ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-4|SVEP1;ENST00000467821.1_1_9:113205816-113312285:-|nuORF	ENSG00000165124|ENST00000374469|SVEP1	ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.28668212890625	2	472.287808	942.561064	-0.10759	-5.0814E-05	1.138	0.00053746	1.0304	0.00048665	472.2885582597605	102.46	1.3693	102.48	101.69	103.06	0.01989					55	32	3	0	0	0	0.7932	1	10971	10971		21.96	1.9631	1	278200			61883	6050	41274	41291	70167	70167					0.08748582399982752
VKRGCVYLYG	10	Unmodified	_VKRGCVYLYG_					0	0	0		nc|ENSG00000040199|Q6ZVD8-3|PHLPP2;ENSG00000040199|ENST00000568954|PHLPP2;nc|ENSG00000040199|Q6ZVD8-2|PHLPP2;ENST00000538126.5_1_16:71712656-71757677:-|nuORF	nc|ENSG00000040199|Q6ZVD8-3|PHLPP2	nc|ENSG00000040199|Q6ZVD8-3|PHLPP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.8442993164062	2	579.310426	1156.6063	-0.9148	-0.00052995	4.1303	0.0023928	3.2156	0.0018628	579.3128048682865	102.38	0.98157	102.4	102.04	103.02	0.01989					40	23	3	0	0	0	0.37624	1	10946	10946		29.15	10.887	1	162790			61884	927	41275	41292	70168	70168					0.03426064870859591
VKRGLALL	8	Unmodified	_VKRGLALL_					0	0	0			REV__ENST00000405546.7_1_2:242612072-242612480:+|nuORF	REV__ENST00000405546.7_1_2:242612072-242612480:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.30010986328125	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.85787	1	6503	6503		9.4706	0.64823	1	2081500	+		61885	26293	41276	41293	70169	70169					0.14627262273359065
VKRGLALL	8	Unmodified	_VKRGLALL_					0	0	0			REV__ENST00000405546.7_1_2:242612072-242612480:+|nuORF	REV__ENST00000405546.7_1_2:242612072-242612480:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3002014160156	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.80963	1	6517	6517		15.636	3.4294	1	1819800	+		61886	26293	41276	41293	70170	70170					0.14627262273359065
VKRGLALL	8	Unmodified	_VKRGLALL_					0	0	0			REV__ENST00000405546.7_1_2:242612072-242612480:+|nuORF	REV__ENST00000405546.7_1_2:242612072-242612480:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.29998779296875	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.80706	1	8497	8497		19.36	1.995	1	5485100	+		61887	26293	41276	41293	70171	70171					0.14627262273359065
VKRGLVNTG	9	Unmodified	_VKRGLVNTG_					0	0	0			REV__ENSG00000137409|ENST00000373627|MTCH1	REV__ENSG00000137409|ENST00000373627|MTCH1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2877502441406	2	472.287808	942.561064	-0.97076	-0.00045848	0.82719	0.00039067	-0.14357	-6.7805E-05	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.76764	1	9565	9565		34.173	2.6427	1	26024000	+		61888	19382	41277	41294	70172	70172					0.0874858239999412
VKRGLVNTG	9	Unmodified	_VKRGLVNTG_					0	0	0			REV__ENSG00000137409|ENST00000373627|MTCH1	REV__ENSG00000137409|ENST00000373627|MTCH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2877502441406	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.69624	1	9853	9853		40.778	1.5253	1	48696000	+		61889	19382	41277	41294	70173	70173					0.0874858239999412
VKRGRLPD	8	Unmodified	_VKRGRLPD_					0	0	0		HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|105|1|anti-sense	HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|105|1|anti-sense	HERVH-int_dup5075|chr15:35239063-35242176:+|1.390482643787068|0.0628280606735761|4.47|60.0|105|1|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.7890930175781	2	470.787976	939.561398	0.23461	0.00011045	3.3163	0.0015613	3.5509	0.0016717	470.78940338022073	40.706	0.90746	40.675	40.3	41.208	-0.030991					39	26	2	0	0	0	0.86288	1	2933	2933		26.796	5.8492	1	164280			61890	14499	41278	41295	70174	70174					0.0892000211983941
VKRIAALP	8	Unmodified	_VKRIAALP_					0	0	0		ENSG00000124089|ENST00000243911|MC3R;ENSG00000176136|ENST00000589410|MC5R	ENSG00000124089|ENST00000243911|MC3R	ENSG00000124089|ENST00000243911|MC3R	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.2921142578125	2	434.292362	866.570172	1.3298	0.00057754	-1.2334	-0.00053567	0.096397	4.1864E-05	434.29169449906215	74.098	0.89874	74.141	73.805	74.703	0.043648					67	35	2	0	0	0	0.81548	1	7151	7151		20.482	0	1	752660			61891	3302	41279	41296	70175	70175					0.13154975756299336
VKRKAPAP	8	Unmodified	_VKRKAPAP_					0	0	0		ENSG00000115504|ENST00000431489|EHBP1;nc|ENSG00000115504|Q8NDI1-2|EHBP1;nc|ENSG00000115504|Q8NDI1|EHBP1;ENST00000462441.1_1_2:63101526-63108832:+|nuORF	ENSG00000115504|ENST00000431489|EHBP1	ENSG00000115504|ENST00000431489|EHBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799377441406	2	433.782162	865.549771	0.28843	0.00012512	-3.8544	-0.001672	-3.566	-0.0015469	433.78110763255734	50.946	4.0891	50.995	50.343	54.432	0.049896					422	122	5	0	0	0	0.81548	3	4382	4382;4444;4455		20.482	5.8177	1	4871400			61892	2850	41280	41297	70176;70177;70178	70176					0.11161805096492117
VKRKGPIA	8	Unmodified	_VKRKGPIA_					0	0	0		ENST00000577339.5_1_17:42976535-42976679:+|nuORF	ENST00000577339.5_1_17:42976535-42976679:+|nuORF	ENST00000577339.5_1_17:42976535-42976679:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77947998046875	2	434.789987	867.565421	0.016826	7.3157E-06	-1.4931	-0.00064917	-1.4762	-0.00064185	434.7891308979144	48.609	0.5266	48.603	48.43	48.957	-0.0056419					16	11	2	0	0	0	0.4196	1	4034	4034		33.516	5.2613	1	47573			61893	14065	41281	41298	70179	70179					0.12634091613540477
VKRKKVPQL	9	Unmodified	_VKRKKVPQL_					0	0	0			REV__ENSG00000198218|ENST00000395443|QRICH1	REV__ENSG00000198218|ENST00000395443|QRICH1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.3744506835938	2	548.371675	1094.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.31	1	37.25	36.75	37.75	-0.060333								0	0	0	0.34348	1	2124	2124		16.473	0	1		+		61894	23310	41282	41299	70180	70180					0.18522269664595115
VKRKKVPQL	9	Unmodified	_VKRKKVPQL_					0	0	0			REV__ENSG00000198218|ENST00000395443|QRICH1	REV__ENSG00000198218|ENST00000395443|QRICH1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.3739624023438	2	548.371675	1094.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.442	1	37.381	36.881	37.881	-0.060333								0	0	0	0.34348	1	2142	2142		16.473	0	1		+		61895	23310	41282	41299	70181	70181					0.18522269664595115
VKRKSSRAM	9	Unmodified	_VKRKSSRAM_					0	0	0		ENST00000586582.5_1_19:4559688-4559799:-|nuORF	ENST00000586582.5_1_19:4559688-4559799:-|nuORF	ENST00000586582.5_1_19:4559688-4559799:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8170776367188	2	531.813667	1061.61278	1.8637	0.00099113	4.131	0.0021969	5.9947	0.003188	531.8157444108199	88.686	4.0119	88.613	87.337	91.349	-0.07238					352	95	5	0	0	0	0.76255	1	9229	9229		35.618	6.4687	1	4423300			61896	14171	41283	41300	70182	70182					0.08444002822238872
VKRKTAPSD	9	Unmodified	_VKRKTAPSD_					0	0	0			REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24	REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904968261719	2	501.290548	1000.56654	0.65622	0.00032896	-1.0593	-0.000531	-0.40304	-0.00020204	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.7932	1	8152	8152		26.693	0	1	2931000	+		61897	18067	41284	41301	70183	70183					0.06628261191781348
VKRLAILG	8	Unmodified	_VKRLAILG_					0	0	0		ENST00000540341.1_1_12:8787977-8789216:+|nuORF	ENST00000540341.1_1_12:8787977-8789216:+|nuORF	ENST00000540341.1_1_12:8787977-8789216:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2996520996094	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.81548	1	7572	7572		20.482	0	1	5485100			61898	13494	41285	41302	70184	70184					0.14627262273370434
VKRLGHIDSKV	11	Unmodified	_VKRLGHIDSKV_					0	0	0			REV__ENST00000581937.1_1_18:9678609-9679128:-|nuORF	REV__ENST00000581937.1_1_18:9678609-9679128:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3807983398438	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.7	1	115.63	115.13	116.13	-0.069672								0	0	0	0.56276	1	12409	12409		19.104	0.84144	1		+		61899	29054	41286	41303	70185	70185					0.1305614547973164
VKRLHGMLRSL	11	Unmodified	_VKRLHGMLRSL_					0	0	0		nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1;ENSG00000008710|ENST00000262304|PKD1	nc|ENSG00000008710|P98161-2|PKD1	nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26812744140625	3	437.267691	1308.78124	-1.6775	-0.00073351	1.9864	0.00086859	0.30892	0.00013508	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.72374	1	4617	4617		27.644	2.5179	1	2305800			61900	14737	41287	41304	70186	70186					0.13920484735899663
VKRLLAGI	8	Unmodified	_VKRLLAGI_					0	0	0			REV__ENSG00000160796|ENST00000450053|NBEAL2	REV__ENSG00000160796|ENST00000450053|NBEAL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2998962402344	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.80706	1	7597	7597		19.36	0	1	5485100	+		61901	20741	41288	41305	70187	70187					0.14627262273359065
VKRLLGKVHIL	11	Unmodified	_VKRLLGKVHIL_					0	0	0		nc|ENSG00000290988|Q8N8C0-2|ZNF781;nc|ENSG00000290988|Q8N8C0|ZNF781	nc|ENSG00000290988|Q8N8C0-2|ZNF781	nc|ENSG00000290988|Q8N8C0-2|ZNF781	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.24603271484375	3	425.958963	1274.85506	0.95304	0.00040596	-0.30819	-0.00013128	0.64485	0.00027468	426.29334744127203	86.756	1.1112	86.682	86.355	87.466	-0.074005					34	25	2	0	0	0	0.18066	1	9065	9065		9.6461	0	1	46566			61902	15344	41289	41306	70188	70188					0.22862776169881727
VKRLLGKVHIL	11	Unmodified	_VKRLLGKVHIL_					0	0	0		nc|ENSG00000290988|Q8N8C0-2|ZNF781;nc|ENSG00000290988|Q8N8C0|ZNF781	nc|ENSG00000290988|Q8N8C0-2|ZNF781	nc|ENSG00000290988|Q8N8C0-2|ZNF781	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	425.958963	1274.85506	0.6058	0.00025805	0.3226	0.00013741	0.9284	0.00039546	425.95800366026754	86.634	0.46932	86.783	86.443	86.912	0.14902	0.018577	0.0023628	NaN	9.6461	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18303			61903	15344	41289	41306							0.22862776169881727
VKRLVSTKKH	10	Unmodified	_VKRLVSTKKH_					0	0	0			REV__nc|ENSG00000155719|Q7RTW8-2|OTOA	REV__nc|ENSG00000155719|Q7RTW8-2|OTOA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3801879882812	2	598.385314	1194.75608	-1.7339	-0.0010376	-4.4788	-0.00268	-6.2127	-0.0037176	598.3825106466512	40.786	0.41102	41.178	40.968	41.379	0.39209					40	11	4	0	0	0	0.82886	1	3520	3520		37.812	5.061	1	3668000	+		61904	20440	41290	41307	70189	70189					0.16648753204981404
VKRLVSTKKH	10	Unmodified	_VKRLVSTKKH_					0	0	0			REV__nc|ENSG00000155719|Q7RTW8-2|OTOA	REV__nc|ENSG00000155719|Q7RTW8-2|OTOA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3809814453125	2	598.385314	1194.75608	-1.6771	-0.0010036	-4.1651	-0.0024923	-5.8422	-0.0034959	598.3826958044465	40.727	0.40505	41.317	41.083	41.488	0.58915					37	11	4	0	0	0	0.86348	1	3514	3514		31.53	2.3598	1	4146200	+		61905	20440	41290	41307	70190	70190					0.16648753204981404
VKRLVSTKKH	10	Unmodified	_VKRLVSTKKH_					0	0	0			REV__nc|ENSG00000155719|Q7RTW8-2|OTOA	REV__nc|ENSG00000155719|Q7RTW8-2|OTOA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3806762695312	2	598.385314	1194.75608	-1.9026	-0.0011385	-3.9964	-0.0023914	-5.8991	-0.0035299	598.382916950216	41.981	1.3246	42.679	42.307	43.632	0.69754					74	32	4	0	0	0	0.86272	1	3735	3735		24.519	0	1	1992800	+		61906	20440	41290	41307	70191	70191					0.16648753204981404
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	445.6360778808594	3	445.638001	1333.89217	-1.9097	-0.00085104	-2.6126	-0.0011643	-4.5223	-0.0020153	445.63677498796693	37.861	1.5036	37.861	37.561	39.065	0					158	36	5	0	0	0	0.79476	1	2295	2295		12.433	6.112	1	3037500	+		61907	21199	41291	41308	70192	70192					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	445.6358947753906	3	445.638001	1333.89217	-1.8882	-0.00084145	-2.978	-0.0013271	-4.8662	-0.0021686	445.63652923617207	39.439	1.6779	39.439	38.941	40.619	0					161	43	5	0	0	0	0.75457	3	2543	2521;2531;2543		21.032	11.386	1	2896500	+		61908	21199	41291	41308	70193;70194;70195	70195					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	445.6359558105469	3	445.638001	1333.89217	-1.3321	-0.00059364	-3.971	-0.0017696	-5.3031	-0.0023633	445.635969833485	39.605	1.7881	39.562	39.162	40.95	-0.043694					160	44	5	0	0	0	0.79224	1	2871	2871		12.957	6.6366	1	3064400	+		61909	21199	41291	41308	70196	70196					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	445.6360168457031	3	445.638001	1333.89217	-0.81294	-0.00036228	-3.8522	-0.0017167	-4.6651	-0.002079	445.63619845135753	38.269	1.4517	38.28	37.812	39.264	0.011173					148	33	5	0	0	0	0.79476	1	2616	2616		12.433	2.3289	1	3428600	+		61910	21199	41291	41308	70197	70197					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	445.638001	1333.89217	-1.8882	-0.00084145	-2.978	-0.0013271	-4.8662	-0.0021686	445.63652923617207	39.439	1.6779	39.439	38.941	40.619	0	-0.16371	0.0015695	NaN	21.032	161	43	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2896500	+		61911	21199	41291	41308							0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	445.638001	1333.89217	-1.9097	-0.00085104	-2.6126	-0.0011643	-4.5223	-0.0020153	445.63677498796693	37.861	1.5036	37.861	37.561	39.065	0	0.038127	0.0017407	NaN	12.433	158	36	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3037500	+		61912	21199	41291	41308							0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	445.638001	1333.89217	0.14992	6.6809E-05	-5.6062	-0.0024983	-5.4563	-0.0024315	445.6351169687705	39.855	1.5336	39.824	39.401	40.935	-0.03027	0.22152	-0.0019442	NaN	21.032	140	40	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3645100	+		61913	21199	41291	41308							0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	445.638001	1333.89217	-1.3321	-0.00059364	-3.971	-0.0017696	-5.3031	-0.0023633	445.635969833485	39.605	1.7881	39.562	39.162	40.95	-0.043694	-0.041428	0.00024185	NaN	21.032	160	44	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3064400	+		61914	21199	41291	41308							0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	445.638001	1333.89217	-0.59126	-0.00026349	-4.7158	-0.0021015	-5.307	-0.002365	445.63560037885895	39.7	1.699	39.709	39.141	40.84	0.0092812	0.10589	-0.0007538	NaN	21.032	150	41	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3440600	+		61915	21199	41291	41308							0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	445.638001	1333.89217	-1.4318	-0.00063807	-3.3184	-0.0014788	-4.7502	-0.0021169	445.6362975638635	39.581	1.6828	39.587	39.118	40.801	0.0065002	-0.015716	0.0011144	NaN	21.032	148	49	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3372000	+		61916	21199	41291	41308							0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	445.638001	1333.89217	-1.437	-0.00064039	0.071391	3.1815E-05	-1.3656	-0.00060857	445.9733203164074	37.623	0.1433	37.639	37.545	37.688	0.016563	-0.18402	0.005329	NaN	12.433	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50984	+		61917	21199	41291	41308							0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	445.638001	1333.89217	0.18227	8.1227E-05	-4.6439	-0.0020695	-4.4617	-0.0019883	445.63582798673895	37.822	1.4426	37.92	37.643	39.086	0.097851	0.097066	-0.000975	NaN	12.433	200	47	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3162500	+		61918	21199	41291	41308							0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	445.638001	1333.89217	-0.016266	-7.2487E-06	-4.5325	-0.0020199	-4.5488	-0.0020271	445.6359012372507	37.93	1.4569	37.872	37.615	39.071	-0.057915	0.048824	-0.00082608	NaN	12.433	185	45	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3279000	+		61919	21199	41291	41308							0.23858447715633702
VKRRNRHSLVG	11	Unmodified	_VKRRNRHSLVG_					0	0	0		nc|ENSG00000160410|Q8TBC3-2|SHKBP1;ENSG00000160410|ENST00000291842|SHKBP1	nc|ENSG00000160410|Q8TBC3-2|SHKBP1	nc|ENSG00000160410|Q8TBC3-2|SHKBP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.6014709472656	3	441.268971	1320.78508	0.31993	0.00014118	-2.7125	-0.0011969	-2.3925	-0.0010557	441.267738786763	54.091	1.5437	54.172	53.282	54.825	0.081528					89	40	3	0	0	0	0.76251	1	4439	4439		19.263	1.4295	1	143500			61920	5586	41292	41309	70198	70198					0.13752290553952662
VKRRVRIPNKP	11	Unmodified	_VKRRVRIPNKP_					0	0	0		nc|ENSG00000184792|Q969R2-2|OSBP2;ENSG00000184792|ENST00000332585|OSBP2;nc|ENSG00000184792|Q969R2-5|OSBP2;nc|ENSG00000184792|Q969R2-4|OSBP2;nc|ENSG00000184792|Q969R2-6|OSBP2;nc|ENSG00000184792|Q969R2-3|OSBP2	nc|ENSG00000184792|Q969R2-2|OSBP2	nc|ENSG00000184792|Q969R2-2|OSBP2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.1908874511719	3	454.965	1361.87317	0.21912	9.9691E-05	4.0966	0.0018638	4.3158	0.0019635	454.96661239893626	40.803	1.2039	40.884	40.553	41.757	0.081345					92	38	3	0	0	0	0.17955	1	2576	2576		5.4129	0	1	591430			61921	7642	41293	41310	70199	70199					0.206709111445889
VKRRVSTE	8	Unmodified	_VKRRVSTE_					0	0	0			REV__nc|ENSG00000143375|Q9P2M7-2|CGN	REV__nc|ENSG00000143375|Q9P2M7-2|CGN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7911071777344	2	487.790715	973.566878	-1.4525	-0.00070854	0.96091	0.00046872	-0.49164	-0.00023982	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.87064	1	7904	7904		29.15	0.89528	1	503530	+		61922	19799	41294	41311	70200	70200					0.07903680911658739
VKRSFTKF	8	Unmodified	_VKRSFTKF_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.80047607421875	2	506.800552	1011.58655	-1.5095	-0.000765	2.422	0.0012274	0.91248	0.00046244	506.8017338500082	46.598	2.104	46.598	45.336	47.44	0					97	57	2	0	0	0	0.8621	1	3399	3399		26.693	2.4902	1	294110	+		61923	23662	41295	41312	70201	70201					0.08122056922411502
VKRSFTKF	8	Unmodified	_VKRSFTKF_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7985534667969	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.149	1	43.149	42.649	43.649	0								0	0	0	0.29755	1	3041	3041		24.203	3.7209	1		+		61924	23662	41295	41312	70202	70202					0.08122056922411502
VKRSFTKF	8	Unmodified	_VKRSFTKF_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.79949951171875	2	506.800552	1011.58655	-0.86379	-0.00043777	0.93984	0.00047631	0.076052	3.8543E-05	506.8010240498416	43.849	2.352	43.815	42.486	44.838	-0.033474					86	55	2	0	0	0	0.87064	1	3510	3510		29.15	3.6994	1	326070	+		61925	23662	41295	41312	70203	70203					0.08122056922411502
VKRSFTKF	8	Unmodified	_VKRSFTKF_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7996826171875	2	506.800552	1011.58655	-0.566	-0.00028685	1.7071	0.00086518	1.1411	0.00057833	506.80135816429055	49.177	1.8282	49.153	47.938	49.766	-0.024033					72	41	2	0	0	0	0.87064	1	4126	4126		29.15	3.6994	1	127540	+		61926	23662	41295	41312	70204	70204					0.08122056922411502
VKRSFTKF	8	Unmodified	_VKRSFTKF_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8005676269531	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.266	1	48.241	47.741	48.741	-0.025112								0	0	0	0.30305	1	4072	4072		42.396	13.247	1		+		61927	23662	41295	41312	70205	70205					0.08122056922411502
VKRSFTKF	8	Unmodified	_VKRSFTKF_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.801025390625	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.189	1	51.166	50.666	51.666	-0.02343								0	0	0	0.30074	1	4466	4466		40.778	3.6191	1		+		61928	23662	41295	41312	70206	70206					0.08122056922411502
VKRSFTKF	8	Unmodified	_VKRSFTKF_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.801025390625	2	506.800552	1011.58655	-0.50987	-0.0002584	1.9226	0.00097437	1.4127	0.00071597	506.80138378201497	51.594	1.2506	51.571	50.944	52.195	-0.02343					45	30	2	0	0	0	0.4196	1	4466	4466		40.778	15.328	1	100870	+		61929	23662	41295	41312	70207	70207					0.08122056922411502
VKRSFTKF	8	Unmodified	_VKRSFTKF_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.80096435546875	2	506.800552	1011.58655	-0.74642	-0.00037829	1.5683	0.00079484	0.82192	0.00041655	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.89494	1	3685	3685		37.159	6.6555	1	258120	+		61930	23662	41295	41312	70208	70208					0.08122056922411502
VKRSFTKF	8	Unmodified	_VKRSFTKF_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8003845214844	2	506.800552	1011.58655	-0.49395	-0.00025034	1.9681	0.00099743	1.4741	0.0007471	506.80151845061806	48.096	1.8847	48.118	47.669	49.554	0.02227					69	50	2	0	0	0	0.90465	1	3689	3689		40.573	5.3719	1	219330	+		61931	23662	41295	41312	70209	70209					0.08122056922411502
VKRTKLEAS	9	Unmodified	_VKRTKLEAS_					0	0	0		L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|10|1|sense	L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|10|1|sense	L1PA11_dup580|chr2:214963946-214966413:+|1.7510767315855986|0.244988541359441|2.84|63.0|10|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.314208984375	2	516.314023	1030.61349	2.7793	0.001435	-3.2178	-0.0016614	-0.43843	-0.00022637	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.7932	1	10959	10959		26.693	0	1	67991000			61932	14609	41296	41313	70210	70210					0.09941120742928433
VKRTRPRLRRL	11	Unmodified	_VKRTRPRLRRL_					0	0	0			REV__ENSG00000100365|ENST00000248899|NCF4	REV__ENSG00000100365|ENST00000248899|NCF4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.57977294921875	3	484.323299	1449.94807	-0.87706	-0.00042478	2.5334	0.001227	1.6564	0.00080221	484.32445532137234	15.088	0.18597	15.137	15.059	15.245	0.04908					21	8	3	0	0	0	0.18372	1	17	17		6.3209	6.0344	1	118970	+		61933	17182	41297	41314	70211	70211					0.2410909367581553
VKRTRPRLRRL	11	Unmodified	_VKRTRPRLRRL_					0	0	0			REV__ENSG00000100365|ENST00000248899|NCF4	REV__ENSG00000100365|ENST00000248899|NCF4	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	484.323299	1449.94807	-2.0028	-0.00097	3.5759	0.0017319	1.5731	0.00076188	484.32492823780785	15.413	0.22422	15.413	15.294	15.518	0	0.049318	0.0022491	NaN	6.3209	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141760	+		61934	17182	41297	41314							0.2410909367581553
VKRYKKAKFD	10	Unmodified	_VKRYKKAKFD_					0	0	0			REV__ENSG00000068383|ENST00000368594|INPP5A	REV__ENSG00000068383|ENST00000368594|INPP5A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8822631835938	2	641.885147	1281.75574	-0.046992	-3.0164E-05	-4.0766	-0.0026167	-4.1236	-0.0026469	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.77314	1	9839	9839		40.778	10.46	1	2217900	+		61935	16558	41298	41315	70212	70212					0.12613333485114708
VKSAKRRSG	9	Unmodified	_VKSAKRRSG_					0	0	0			REV__ENSG00000083457|ENST00000263087|ITGAE	REV__ENSG00000083457|ENST00000263087|ITGAE	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.77899169921875	2	494.804157	987.593761	-0.25849	-0.0001279	3.0616	0.0015149	2.8031	0.001387	494.8055611546194	77.38	0.63557	77.786	77.547	78.183	0.40531					19	14	2	0	0	0	0.20789	1	8856	8856		9.1829	0	1	148920	+		61936	16855	41299	41316	70213	70213					0.09946789522859945
VKSEEVLR	8	Unmodified	_VKSEEVLR_					0	0	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.28076171875	2	480.279649	958.544745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.359	1	26.404	25.904	26.904	0.045507								0	0	0	0.30305	1	1110	1110		42.396	1.618	1				61937	2636	41300	41317	70214	70214					0.06381456443227762
VKSFTIGPE	9	Unmodified	_VKSFTIGPE_					0	0	0			REV__ENST00000468303.5_1_1:24742482-24742845:-|nuORF	REV__ENST00000468303.5_1_1:24742482-24742845:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.26025390625	2	489.26875	976.522947	-1.2028	-0.00058851	-1.682	-0.00082293	-2.8848	-0.0014114	489.26775815572165	40.707	0.50734	40.666	40.383	40.891	-0.04081					25	13	2	0	0	0	0.76764	1	3011	3011		34.173	1.3601	1	315910	+		61938	27181	41301	41318	70215	70215					0.03374651694673503
VKSGFVPNV	9	Unmodified	_VKSGFVPNV_					0	0	0		ENSG00000155961|ENST00000369454|RAB39B	ENSG00000155961|ENST00000369454|RAB39B	ENSG00000155961|ENST00000369454|RAB39B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.7701416015625	2	473.77146	945.528367	-0.53381	-0.0002529	-3.9902	-0.0018904	-4.524	-0.0021433	473.76958016102765	28.574	0.70219	28.555	28.215	28.917	-0.019407					32	17	3	0	0	0	0.64922	1	1395	1395		44.117	6.9577	1	82680			61939	5353	41302	41319	70216	70216					0.05342375277143674
VKSISIVPI	9	Unmodified	_VKSISIVPI_					0	0	0			REV__ENST00000477626.5_1_14:45565934-45566048:+|nuORF	REV__ENST00000477626.5_1_14:45565934-45566048:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.3142395019531	2	478.312961	954.611368	-0.94284	-0.00045097	3.5259	0.0016865	2.583	0.0012355	478.3144596532281	37.106	2.4774	37.053	36.426	38.903	-0.053555					82	55	3	0	0	0	0.7932	1	2479	2479		21.96	1.9631	1	82339	+		61940	27363	41303	41320	70217	70217					0.13224692005132965
VKSKEEELKAL	11	Unmodified	_VKSKEEELKAL_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	637.3685302734375	2	637.371735	1272.72892	-1.1676	-0.00074419	-0.6798	-0.00043329	-1.8474	-0.0011775	637.3712208846088	105.62	2.2472	105.69	104.93	107.17	0.07312					175	54	4	0	0	0	0.75164	1	11195	11195		21.686	0	1	2485300			61941	4726	41304	41321	70218	70218					0.10346180083274703
VKSKHRDL	8	Unmodified	_VKSKHRDL_					0	0	0		nc|ENSG00000004487|O60341|KDM1A;ENSG00000004487|ENST00000400181|KDM1A	nc|ENSG00000004487|O60341|KDM1A	nc|ENSG00000004487|O60341|KDM1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7977600097656	2	491.793258	981.571963	-0.05486	-2.698E-05	4.268	0.002099	4.2132	0.002072	491.79521966656876	43.339	1.2355	43.289	42.859	44.095	-0.050308					43	29	2	0	0	0	0.89494	1	2958	2958		37.159	5.6293	1	209020			61942	661	41305	41322	70219	70219					0.08043984774269575
VKSKKTVE	8	Unmodified	_VKSKKTVE_					0	0	0		ENSG00000156697|ENST00000394422|UTP14A;nc|ENSG00000156697|Q9BVJ6-3|UTP14A	ENSG00000156697|ENST00000394422|UTP14A	ENSG00000156697|ENST00000394422|UTP14A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	459.25408935546875	2	459.784567	917.554582	1.2741	0.00058582	-1.0679	-0.00049101	0.20622	9.4817E-05	459.7837621475209	23.863	0.89914	23.289	22.965	23.864	-0.57415					27	20	2	0	0	0	0.4196	1	1061	1061		23.042	0	1	48806			61943	5389	41306	41323	70220	70220					0.09250644448604817
VKSKTLKESN	10	Unmodified	_VKSKTLKESN_					0	0	0			REV__nc|ENSG00000166401|P50452-3|SERPINB8	REV__nc|ENSG00000166401|P50452-3|SERPINB8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3298950195312	2	567.32987	1132.64519	1.8589	0.0010546	-2.0003	-0.0011348	-0.14134	-8.0184E-05	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86218	1	9826	9826		32.812	2.3088	1	15439000	+		61944	21289	41307	41324	70221	70221					0.08417068706262398
VKSNAVLTGF	10	Unmodified	_VKSNAVLTGF_					0	0	0			REV__ENSG00000165164|ENST00000378653|CFAP47;REV__nc|ENSG00000165164|Q6ZTR5-6|CFAP47	REV__nc|ENSG00000165164|Q6ZTR5-6|CFAP47	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.2769165039062	2	518.295299	1034.57605	-0.5253	-0.00027226	0.27918	0.0001447	-0.24612	-0.00012756	518.7969691068075	72.965	0.20628	73.351	73.248	73.454	0.38581					6	4	2	0	0	0	0.37624	1	8172	8172		34.173	12.213	1	24009	+		61945	21154;30000	41308	41325	70222	70222					0.060140294773418645
VKSPHLRKASA	11	Unmodified	_VKSPHLRKASA_					0	0	0		nc|ENSG00000064692|Q9Y6H5-4|SNCAIP;ENSG00000064692|ENST00000261368|SNCAIP;nc|ENSG00000064692|Q9Y6H5-3|SNCAIP;ENST00000510003.5_1_5:121726829-121776497:+|nuORF;nc|ENSG00000064692|Q9Y6H5-6|SNCAIP	nc|ENSG00000064692|Q9Y6H5-4|SNCAIP	nc|ENSG00000064692|Q9Y6H5-4|SNCAIP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.358154296875	2	597.359296	1192.70404	-0.56757	-0.00033904	-1.0155	-0.00060663	-1.5831	-0.00094568	597.3583507246964	100.49	3.0775	100.53	99.343	102.42	0.036919					171	72	4	0	0	0	0.67778	1	10718	10718		35.152	5.982	1	3951300			61946	1109	41309	41326	70223	70223					0.11539589791232174
VKSSPVGGGP	10	Unmodified	_VKSSPVGGGP_					0	0	0		nc|ENSG00000128283|Q00587-2|CDC42EP1;ENSG00000128283|ENST00000249014|CDC42EP1	nc|ENSG00000128283|Q00587-2|CDC42EP1	nc|ENSG00000128283|Q00587-2|CDC42EP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7442932128906	2	442.745442	883.476331	0.24971	0.00011056	-1.799	-0.0007965	-1.5493	-0.00068594	442.74454650481835	88.729	0.69301	89.178	88.753	89.446	0.44892					54	16	4	0	0	0	0.60985	1	10471	10471		49.536	1.6204	1	6816600			61947	3535	41310	41327	70224	70224					0.02993211863383749
VKSSPVGGGP	10	Unmodified	_VKSSPVGGGP_					0	0	0		nc|ENSG00000128283|Q00587-2|CDC42EP1;ENSG00000128283|ENST00000249014|CDC42EP1	nc|ENSG00000128283|Q00587-2|CDC42EP1	nc|ENSG00000128283|Q00587-2|CDC42EP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7447509765625	2	442.745442	883.476331	0.39735	0.00017592	-1.8334	-0.00081175	-1.4361	-0.00063583	442.74450802650625	89.278	0.7365	89.729	89.448	90.184	0.45058					60	17	4	0	0	0	0.67571	1	10497	10497		45.972	5.1941	1	3535200			61948	3535	41310	41327	70225	70225					0.02993211863383749
VKSVLLGLQQL	11	Unmodified	_VKSVLLGLQQL_					0	0	0			REV__nc|ENSG00000090659|Q9NNX6-8|CD209	REV__nc|ENSG00000090659|Q9NNX6-8|CD209	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.3795166015625	2	599.381906	1196.74926	-0.54345	-0.00032574	-2.532	-0.0015176	-3.0754	-0.0018434	599.3802252506414	103.57	3.0198	103.57	103.18	106.2	-0.0035782					175	72	5	0	0	0	0.64498	1	11135	11135		39.253	0.44669	1	11998000	+		61949	29724	41311	41328	70226	70226					0.15875395533748815
VKTFKLKKREK	11	Unmodified	_VKTFKLKKREK_					0	0	0		ENST00000548158.1_1_12:50393384-50398020:-|nuORF;ENSG00000161800|ENST00000312377|RACGAP1	ENST00000548158.1_1_12:50393384-50398020:-|nuORF	ENST00000548158.1_1_12:50393384-50398020:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	468.9708557128906	3	468.973161	1403.89765	-1.0505	-0.00049264	-3.5077	-0.001645	-4.5582	-0.0021377	468.97139201096996	48.715	1.6673	48.738	48.193	49.86	0.022274					129	42	5	0	0	0	0.79476	1	3765	3765		12.433	2.3289	1	766650			61950	5656	41312	41329	70227	70227					0.21186126507450354
VKTGGFIVH	9	Unmodified	_VKTGGFIVH_					0	0	0			REV__ENSG00000105726|ENST00000357324|ATP13A1	REV__ENSG00000105726|ENST00000357324|ATP13A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.278076171875	2	479.279452	956.544351	-0.81003	-0.00038823	-2.4891	-0.001193	-3.2991	-0.0015812	479.2781277040713	97.238	1.2623	97.469	96.955	98.217	0.23103					74	29	3	0	0	0	0.76255	1	10069	10069		35.618	0	1	700460	+		61951	17565	41313	41330	70228	70228					0.06434081514032641
VKTGRGGAH	9	Unmodified	_VKTGRGGAH_					0	0	0			REV__ENST00000427977.6_1_1:151337413-151341586:-|nuORF	REV__ENST00000427977.6_1_1:151337413-151341586:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7448425292969	2	441.74885	881.483148	-1.2454	-0.00055014	2.1251	0.00093875	0.87971	0.00038861	441.74950614355396	89.581	0.3363	90.051	89.762	90.098	0.47068					12	7	2	0	0	0	0.20789	1	10619	10619		25.574	15.868	1	76669	+		61952	26576	41314	41331	70229	70229					0.03766569534604969
VKTKKQRAKTI	11	Unmodified	_VKTKKQRAKTI_					0	0	0			REV__ENSG00000146910|ENST00000636446|CNPY1	REV__ENSG00000146910|ENST00000636446|CNPY1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.2869567871094	3	434.285628	1299.83505	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.031	1	55.023	54.523	55.523	-0.0077095								0	0	0	0.56276	1	4881	4881		20.315	7.8822	1		+		61953	20041	41315	41332	70230	70230					0.19712980439271632
VKTPPSLAPIP	11	Unmodified	_VKTPPSLAPIP_					0	0	0			REV__nc|ENSG00000143442|Q7Z3K3-7|POGZ	REV__nc|ENSG00000143442|Q7Z3K3-7|POGZ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3397827148438	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.74763	1	12650	12650		22.58	1.6327	1	4071000	+		61954	19811	41316	41333	70231	70231					0.11535748579581195
VKTRFATG	8	Unmodified	_VKTRFATG_					0	0	0		ENST00000325203.9_1_8:6420550-6420658:-|nuORF	ENST00000325203.9_1_8:6420550-6420658:-|nuORF	ENST00000325203.9_1_8:6420550-6420658:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.25518798828125	2	440.255977	878.497401	0.43383	0.000191	-1.7245	-0.00075924	-1.2907	-0.00056825	440.2551344280369	66.668	0.61041	66.795	66.527	67.137	0.12649					60	27	3	0	0	0	0.84341	1	5944	5944		24.203	3.2558	1	272000			61955	10068	41317	41334	70232	70232					0.05329221962892916
VKTRIRLH	8	Unmodified	_VKTRIRLH_					0	0	0			REV__ENST00000550009.1_1_12:120875908-120876378:+|nuORF	REV__ENST00000550009.1_1_12:120875908-120876378:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.3273315429688	2	511.832717	1021.65088	-0.47083	-0.00024099	3.5608	0.0018225	3.09	0.0015816	511.8334437423212	16.898	0.14632	16.943	16.848	16.995	0.0457					8	6	2	0	0	0	0.4196	1	203	203		26.796	12.132	1	31748	+		61956	28590	41318	41335	70233	70233					0.14092256799222014
VKTRLKGQKPN	11	Unmodified	_VKTRLKGQKPN_					0	0	0			REV__nc|ENSG00000160710|P55265-5|ADAR	REV__nc|ENSG00000160710|P55265-5|ADAR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8929443359375	2	634.893503	1267.77245	-0.13084	-8.307E-05	-1.4622	-0.00092832	-1.593	-0.0010114	634.8926104141881	105.92	2.3971	105.89	105.14	107.54	-0.025146					233	56	5	0	0	0	0.66929	1	11615	11615		36.447	3.6343	1	40768000	+		61957	20733	41319	41336	70234	70234					0.14927834371087556
VKTRLKGQKPN	11	Unmodified	_VKTRLKGQKPN_					0	0	0			REV__nc|ENSG00000160710|P55265-5|ADAR	REV__nc|ENSG00000160710|P55265-5|ADAR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.8933715820312	2	634.893503	1267.77245	1.3476	0.00085558	-2.8123	-0.0017855	-1.4647	-0.0009299	634.8917450820545	105.74	2.5704	105.77	104.99	107.56	0.038322					256	60	6	0	0	0	0.65746	1	11801	11801		37.812	4.9991	1	42647000	+		61958	20733	41319	41336	70235	70235					0.14927834371087556
VKTRLKGQKPN	11	Unmodified	_VKTRLKGQKPN_					0	0	0			REV__nc|ENSG00000160710|P55265-5|ADAR	REV__nc|ENSG00000160710|P55265-5|ADAR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	634.8929443359375	2	634.893503	1267.77245	1.4999	0.00095225	-3.3387	-0.0021197	-1.8389	-0.0011675	634.8915534478664	105.5	2.5003	105.65	104.92	107.42	0.15924					261	62	5	0	0	0	0.62614	2	11167	11167;11334		41.427	3.6343	1	68597000	+		61959	20733	41319	41336	70236;70237	70236					0.14927834371087556
VKTRLKGQKPN	11	Unmodified	_VKTRLKGQKPN_					0	0	0			REV__nc|ENSG00000160710|P55265-5|ADAR	REV__nc|ENSG00000160710|P55265-5|ADAR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.89306640625	2	634.893503	1267.77245	-1.1756	-0.00074638	-0.58599	-0.00037204	-1.7616	-0.0011184	634.8932404462046	105.63	2.44	105.7	104.97	107.41	0.073112					269	59	6	0	0	0	0.67778	1	11333	11333		35.152	2.3396	1	66671000	+		61960	20733	41319	41336	70238	70238					0.14927834371087556
VKTRLKGQKPN	11	Unmodified	_VKTRLKGQKPN_					0	0	0			REV__nc|ENSG00000160710|P55265-5|ADAR	REV__nc|ENSG00000160710|P55265-5|ADAR	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8931884765625	2	634.893503	1267.77245	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.59	1	107.62	107.12	108.12	0.036125								0	0	0	0.56276	1	11488	11488		35.152	4.8343	1		+		61961	20733	41319	41336	70239	70239					0.14927834371087556
VKTSVLVVQF	10	Unmodified	_VKTSVLVVQF_					0	0	0		ENST00000428632.7_1_12:113682520-113726187:+|nuORF;ENST00000552077.5_1_12:113664633-113726187:+|nuORF;ENSG00000186815|ENST00000335509|TPCN1;nc|ENSG00000186815|Q9ULQ1-3|TPCN1	ENST00000428632.7_1_12:113682520-113726187:+|nuORF	ENST00000428632.7_1_12:113682520-113726187:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.341552734375	2	560.342249	1118.66995	0.86136	0.00048265	-4.1471	-0.0023238	-3.2858	-0.0018412	560.3399969511441	114.39	0.45883	114.45	114.29	114.75	0.061073					24	17	2	0	0	0	0.86047	1	12247	12247		23.523	6.1577	1	458770			61962	7822	41320	41337	70240	70240					0.11535748579603933
VKTTELGH	8	Unmodified	_VKTTELGH_					0	0	0			REV__chr8:73959818-73966476|13|20.08|0.13|7.25|-|0|ELOC,None|1	REV__chr8:73959818-73966476|13|20.08|0.13|7.25|-|0|ELOC,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7447204589844	2	442.745442	883.476331	-0.84967	-0.00037619	-0.44682	-0.00019783	-1.2965	-0.00057401	442.74508565704974	91.361	1.8975	91.832	90.855	92.753	0.47068					98	45	4	0	0	0	0.92457	1	10837	10837		47.916	1.9636	1	3563500	+		61963	15925	41321	41338	70241	70241					0.029932118633723803
VKTTKAAE	8	Unmodified	_VKTTKAAE_					0	0	0			REV__ENSG00000023516|ENST00000025301|AKAP11	REV__ENSG00000023516|ENST00000025301|AKAP11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.2501220703125	2	424.247818	846.481082	2.8565	0.0012119	2.3047	0.00097775	5.1612	0.0021896	424.2488058967198	107.13	1.0598	107.16	106.76	107.82	0.035614					82	24	5	0	0	0	0.87479	1	11765	11765		30.504	0.6621	1	4411900	+		61964	16251	41322	41339	70242	70242					0.05170096006122549
VKTTKAAE	8	Unmodified	_VKTTKAAE_					0	0	0			REV__ENSG00000023516|ENST00000025301|AKAP11	REV__ENSG00000023516|ENST00000025301|AKAP11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	424.2501220703125	2	424.247818	846.481082	0.7342	0.00031148	4.3955	0.0018648	5.1297	0.0021763	424.2497618988356	107.12	1.1041	107.22	106.78	107.88	0.091255					91	26	5	0	0	0	0.87479	1	11506	11506		30.504	2.2494	1	9522100	+		61965	16251	41322	41339	70243	70243					0.05170096006122549
VKTTKKTMAFI	11	Unmodified	_VKTTKKTMAFI_					0	0	0		ENST00000472013.1_1_1:42925643-42925775:+|nuORF	ENST00000472013.1_1_1:42925643-42925775:+|nuORF	ENST00000472013.1_1_1:42925643-42925775:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3759155273438	2	634.375766	1266.73698	0.9338	0.00059238	1.0493	0.00066568	1.9831	0.0012581	634.376227424202	109.98	1.2195	110.05	109.76	110.98	0.073685					116	43	3	0	0	0	0.58425	1	11834	11834		45.972	5.9141	1	11835000			61966	12253	41323	41340	70244	70244					0.1142803579905376
VKTTKKTMAFI	11	Unmodified	_VKTTKKTMAFI_					0	0	0		ENST00000472013.1_1_1:42925643-42925775:+|nuORF	ENST00000472013.1_1_1:42925643-42925775:+|nuORF	ENST00000472013.1_1_1:42925643-42925775:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	634.375766	1266.73698	-0.13717	-8.7017E-05	1.2572	0.00079753	1.12	0.00071051	634.3771315340629	110.22	1.3732	110.16	109.89	111.26	-0.055084	0.10739	0.0047357	NaN	45.972	110	51	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	495650			61967	12253	41323	41340							0.1142803579905376
VKTTPPSL	8	Unmodified	_VKTTPPSL_					0	0	0		nc|ENSG00000069122|Q8IZF2-3|ADGRF5;nc|ENSG00000069122|Q8IZF2-2|ADGRF5;ENSG00000069122|ENST00000283296|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7523498535156	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.869	1	76.918	76.418	77.418	0.049194								0	0	0	0.30045	1	7438	7438		40.573	0	1				61968	1213	41324	41341	70245	70245					0.06383284011531032
VKTVEKLFEQ	10	Unmodified	_VKTVEKLFEQ_					0	0	0		nc|ENSG00000122432|Q5VX52-4|SPATA1;ENSG00000122432|ENST00000699524|SPATA1;nc|ENSG00000122432|Q5VX52|SPATA1	nc|ENSG00000122432|Q5VX52-4|SPATA1	nc|ENSG00000122432|Q5VX52-4|SPATA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.56854248046875	3	407.567689	1219.68124	0.399	0.00016262	-1.9373	-0.00078957	-1.5383	-0.00062695	407.56682923332073	26.935	0.46041	26.976	26.674	27.134	0.040834					21	13	2	0	0	0	0.86742	1	1187	1187		27.644	3.4121	1	32194			61969	3224	41325	41342	70246	70246					0.08018525883107941
VKTVLQDEMAP	11	Unmodified	_VKTVLQDEMAP_					0	0	0		nc|ENSG00000095319|Q5SRE5-2|NUP188	nc|ENSG00000095319|Q5SRE5-2|NUP188	nc|ENSG00000095319|Q5SRE5-2|NUP188	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	615.3717651367188	2	615.823563	1229.63257	0.37163	0.00022886	-4.3748	-0.0026941	-4.0032	-0.0024652	615.8200489160688	78.748	0.16879	79.312	79.248	79.417	0.56332					5	3	2	0	0	0	0.17415	1	9032	9032		33.922	4.7516	1	94216			61970	14802	41326	41343	70247	70247					0.02694289251689952
VKVAADEDED	10	Unmodified	_VKVAADEDED_					0	0	0		ENST00000412580.1_1_2:122466160-122466664:-|nuORF	ENST00000412580.1_1_2:122466160-122466664:-|nuORF	ENST00000412580.1_1_2:122466160-122466664:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3165283203125	2	545.748576	1089.4826	0.056167	3.0653E-05	-0.32977	-0.00017997	-0.27361	-0.00014932	545.7477772340966	88.557	0.56846	89.006	88.753	89.321	0.44892					16	13	2	0	0	0	0.37624	1	10436	10436		32.812	2.4947	1	126040			61971	11340	41327	41344	70248	70248					-0.05856359486438123
VKVAVGKAM	9	Unmodified	_VKVAVGKAM_					0	0	0			REV__ENST00000542359.5_1_11:63776517-63933244:-|nuORF	REV__ENST00000542359.5_1_11:63776517-63933244:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7797546386719	2	451.778231	901.541908	1.0261	0.00046357	2.9325	0.0013249	3.9586	0.0017884	451.779676395938	86.614	1.2405	86.669	86.189	87.43	0.055641					81	28	4	0	0	0	0.74721	1	8811	8811		37.159	3.6435	1	295460	+		61972	19072	41328	41345	70249	70249					0.08719909784736046
VKVAVHLKATK	11	Unmodified	_VKVAVHLKATK_					0	0	0			REV__nc|ENSG00000129351|Q12906|ILF3	REV__nc|ENSG00000129351|Q12906|ILF3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3963012695312	2	597.390065	1192.76558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.4	1	116.36	115.86	116.86	-0.037872								0	0	0	0.56276	1	13961	13961		13.454	4.2711	1		+		61973	18819	41329	41346	70250	70250					0.17690521490499123
VKVCIIEPG	9	Unmodified	_VKVCIIEPG_					0	0	0		ENSG00000170426|ENST00000293502|SDR9C7	ENSG00000170426|ENST00000293502|SDR9C7	ENSG00000170426|ENST00000293502|SDR9C7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27740478515625	2	479.275521	956.536489	0.53004	0.00025403	3.2196	0.0015431	3.7496	0.0017971	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.78536	1	8348	8348		29.15	4.6304	1	2070000			61974	6587	41330	41347	70251	70251					0.05648186202256511
VKVCIIEPG	9	Unmodified	_VKVCIIEPG_					0	0	0		ENSG00000170426|ENST00000293502|SDR9C7	ENSG00000170426|ENST00000293502|SDR9C7	ENSG00000170426|ENST00000293502|SDR9C7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2777099609375	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.76255	1	10017	10017		35.618	1.6967	1	5642300			61975	6587	41330	41347	70252	70252					0.05648186202256511
VKVEGAPLER	10	Unmodified	_VKVEGAPLER_					0	0	0		ENST00000425528.5_3_19:12810805-12810847:-|nuORF	ENST00000425528.5_3_19:12810805-12810847:-|nuORF	ENST00000425528.5_3_19:12810805-12810847:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3179931640625	2	549.319306	1096.62406	-1.4544	-0.00079891	-1.5897	-0.00087326	-3.0441	-0.0016722	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.86802	1	10565	10565		27.047	0.25122	1	2310400			61976	11536	41331	41348	70253	70253					0.0796110339738334
VKVEKRATT	9	Unmodified	_VKVEKRATT_					0	0	0			REV__ENST00000486147.1_1_6:26091287-26093193:+|nuORF	REV__ENST00000486147.1_1_6:26091287-26093193:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3134765625	2	516.314023	1030.61349	0.81864	0.00042267	-0.69207	-0.00035732	0.12657	6.535E-05	516.3135947493408	102.18	1.1683	102.31	101.93	103.1	0.13523					75	28	3	0	0	0	0.7932	1	10831	10831		20.947	0	1	1280900	+		61977	27540	41332	41349	70254	70254					0.09941120742928433
VKVEVKKFV	9	Unmodified	_VKVEVKKFV_					0	0	0		ENST00000592314.5_1_19:2243417-2246882:+|nuORF;ENST00000592839.6_1_19:2243417-2245742:+|nuORF;ENSG00000104897|ENST00000221494|SF3A2	ENST00000592314.5_1_19:2243417-2246882:+|nuORF	ENST00000592314.5_1_19:2243417-2246882:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.2710571289062	2	538.347335	1074.68012	-0.62732	-0.00033771	0.32857	0.00017688	-0.29875	-0.00016083	538.3471937985556	82.418	0.41335	82.844	82.587	83	0.42646					15	9	2	0	0	0	0.20789	1	9550	9550		34.173	2.2177	1	100890			61978	2165	41333	41350	70255	70255					0.14576356304837645
VKVFLNGNK	9	Unmodified	_VKVFLNGNK_					0	0	0		ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A	ENSG00000131747|ENST00000423485|TOP2A	ENSG00000131747|ENST00000423485|TOP2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8035888671875	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.64922	2	8353	8306;8353		44.117	6.9577	1	1874600			61979	3745	41334	41351	70256;70257	70257					0.08902039576844345
VKVFLNGNK	9	Unmodified	_VKVFLNGNK_					0	0	0		ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A	ENSG00000131747|ENST00000423485|TOP2A	ENSG00000131747|ENST00000423485|TOP2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8033447265625	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.74721	2	8559	8367;8559		37.159	1.9584	1	2989000			61980	3745	41334	41351	70258;70259	70259					0.08902039576844345
VKVFVGSFIKK	11	Unmodified	_VKVFVGSFIKK_					0	0	0			REV__ENST00000397415.7_1_6:42848808-42854199:+|nuORF	REV__ENST00000397415.7_1_6:42848808-42854199:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.9068908691406	3	417.932303	1250.77508	0.1388	5.8011E-05	-2.4533	-0.0010253	-2.3145	-0.00096732	418.2655829721653	20.097	0.50455	19.467	19.259	19.764	-0.6296					13	10	2	0	0	0	0.17784	1	588	588		12.433	0	1	22949	+		61981	19996	41335	41352	70260	70260					0.159722897760048
VKVGFYYL	8	Unmodified	_VKVGFYYL_					0	0	0			REV__ENSG00000170426|ENST00000293502|SDR9C7	REV__ENSG00000170426|ENST00000293502|SDR9C7	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.780029296875	2	494.778754	987.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.387	1	86.536	86.036	87.036	0.14902								0	0	0	0.29353	1	8495	8495		28.254	0.37203	1		+		61982	21660	41336	41353	70261	70261					0.04868447425269551
VKVGGPVYR	9	Unmodified	_VKVGGPVYR_					0	0	0		ENSG00000178921|ENST00000314666|PFAS	ENSG00000178921|ENST00000314666|PFAS	ENSG00000178921|ENST00000314666|PFAS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7906188964844	2	487.792727	973.5709	-1.4525	-0.00070854	-3.1625	-0.0015427	-4.6151	-0.0022512	487.7912531199766	82.03	2.7269	82.144	80.644	83.371	0.11426					156	64	4	0	0	0	0.78536	1	7773	7773		29.15	2.3535	1	503530			61983	7231	41337	41354	70262	70262					0.0830577040536582
VKVGKCHFK	9	Unmodified	_VKVGKCHFK_					0	0	0			REV__nc|ENSG00000244687|Q13404-7|UBE2V1	REV__nc|ENSG00000244687|Q13404-7|UBE2V1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.303466796875	2	523.302404	1044.59026	-0.79828	-0.00041774	3.0738	0.0016085	2.2755	0.0011908	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.76255	1	8718	8718		35.618	1.4457	1	9288900	+		61984	30233	41338	41355	70263	70263					0.06974403424624143
VKVGKCHFK	9	Unmodified	_VKVGKCHFK_					0	0	0			REV__nc|ENSG00000244687|Q13404-7|UBE2V1	REV__nc|ENSG00000244687|Q13404-7|UBE2V1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3032836914062	2	523.302404	1044.59026	0.60955	0.00031898	1.6956	0.0008873	2.3051	0.0012063	523.3030765668883	86.258	2.8983	86.701	84.906	87.804	0.44331					238	70	5	0	0	0	0.78983	1	10106	10106		27.882	0	1	4023800	+		61985	30233	41338	41355	70264	70264					0.06974403424624143
VKVIALLG	8	Unmodified	_VKVIALLG_					0	0	0			REV__ENSG00000173065|ENST00000581407|FAM222B	REV__ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7853088378906	2	406.783839	811.553125	0.047491	1.9319E-05	3.8391	0.0015617	3.8866	0.001581	406.7852630065733	31.933	2.0532	31.944	30.848	32.902	0.0109					199	54	4	0	0	0	0.81724	1	1780	1780		14.664	0	1	1606100	+		61986	21884	41339	41356	70265	70265					0.1398105515052066
VKVIALLG	8	Unmodified	_VKVIALLG_					0	0	0			REV__ENSG00000173065|ENST00000581407|FAM222B	REV__ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7851257324219	2	406.783839	811.553125	-0.12701	-5.1665E-05	4.0102	0.0016313	3.8832	0.0015796	406.7853480704683	34.439	1.4356	34.434	33.818	35.254	-0.0047417					125	35	4	0	0	0	0.82464	1	2141	2141		21.702	1.2205	1	1552500	+		61987	21884	41339	41356	70266	70266					0.1398105515052066
VKVIALLG	8	Unmodified	_VKVIALLG_					0	0	0			REV__ENSG00000173065|ENST00000581407|FAM222B	REV__ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7852478027344	2	406.783839	811.553125	-0.3335	-0.00013566	4.1649	0.0016942	3.8314	0.0015586	406.78540371799704	32.13	2.3216	32.079	30.688	33.009	-0.051029					186	54	4	0	0	0	0.81724	2	1890	1890;1935		21.702	0	1	1953100	+		61988	21884	41339	41356	70267;70268	70267					0.1398105515052066
VKVIALLG	8	Unmodified	_VKVIALLG_					0	0	0			REV__ENSG00000173065|ENST00000581407|FAM222B	REV__ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7851257324219	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.81724	1	1865	1865		14.664	0	1	1965300	+		61989	21884	41339	41356	70269	70269					0.1398105515052066
VKVIALLG	8	Unmodified	_VKVIALLG_					0	0	0			REV__ENSG00000173065|ENST00000581407|FAM222B	REV__ENSG00000173065|ENST00000581407|FAM222B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7857360839844	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.81548	3	1421	1421;1486;1501		20.482	5.8177	1	1817700	+		61990	21884	41339	41356	70270;70271;70272	70270					0.1398105515052066
VKVIIDIPE	9	Unmodified	_VKVIIDIPE_					0	0	0		ENSG00000109686|ENST00000604030|SH3D19;nc|ENSG00000109686|Q5HYK7-3|SH3D19;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19;nc|ENSG00000109686|Q5HYK7-5|SH3D19;nc|ENSG00000109686|Q5HYK7-4|SH3D19;ENST00000478503.6_1_4:152043245-152086876:-|nuORF	ENSG00000109686|ENST00000604030|SH3D19	ENSG00000109686|ENST00000604030|SH3D19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.3163452148438	2	513.3157	1024.61685	0.29738	0.00015265	1.324	0.00067964	1.6214	0.00083229	513.3163353757171	43.153	1.1401	43.209	42.87	44.01	0.056744					71	27	3	0	0	0	0.76764	1	2975	2975		34.173	2.2177	1	375110			61991	2477	41340	41357	70273	70273					0.1055237079692688
VKVIIDIPE	9	Unmodified	_VKVIIDIPE_					0	0	0		ENSG00000109686|ENST00000604030|SH3D19;nc|ENSG00000109686|Q5HYK7-3|SH3D19;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19;nc|ENSG00000109686|Q5HYK7-5|SH3D19;nc|ENSG00000109686|Q5HYK7-4|SH3D19;ENST00000478503.6_1_4:152043245-152086876:-|nuORF	ENSG00000109686|ENST00000604030|SH3D19	ENSG00000109686|ENST00000604030|SH3D19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3162841796875	2	513.3157	1024.61685	0.017852	9.1639E-06	1.6083	0.00082558	1.6262	0.00083474	513.3163616040292	43.268	1.3862	43.218	42.749	44.135	-0.050312					74	33	3	0	0	0	0.78058	1	2998	2998		30.504	2.6214	1	383900			61992	2477	41340	41357	70274	70274					0.1055237079692688
VKVIIPFSS	9	Unmodified	_VKVIIPFSS_					0	0	0		ENST00000515208.1_3_5:43613212-43613284:+|nuORF	ENST00000515208.1_3_5:43613212-43613284:+|nuORF	ENST00000515208.1_3_5:43613212-43613284:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.3040771484375	2	495.305136	988.595718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.218	1	34.218	33.718	34.718	0								0	0	0	0.29299	1	1820	1820		33.516	0	1				61993	13077	41341	41358	70275	70275					0.10096405488081928
VKVILKKK	8	Unmodified	_VKVILKKK_					0	0	0		nc|ENSG00000198929|O75052-3|NOS1AP;ENSG00000198929|ENST00000361897|NOS1AP	nc|ENSG00000198929|O75052-3|NOS1AP	nc|ENSG00000198929|O75052-3|NOS1AP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8055725097656	2	478.354963	954.695373	-0.92939	-0.00044458	-3.194	-0.0015279	-4.1234	-0.0019725	478.35116076943933	40.103	0.16784	40.11	40.029	40.196	0.0065002					5	3	2	0	0	0	0.4196	1	2521	2521		25.45	4.9683	1	26091			61994	8372	41342	41359	70276	70276					0.2162126789269223
VKVILVPVL	9	Unmodified	_VKVILVPVL_					0	0	0			REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|0|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|21	REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|0|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.3423767089844	2	490.349346	978.684139	-0.25712	-0.00012608	-2.4886	-0.0012203	-2.7457	-0.0013464	490.348019282133	71.074	3.0831	71.621	70.349	73.432	0.54756					147	75	2	0	0	0	0.7932	1	8015	8015		12.207	0	1	346390	+		61995	15523	41343	41360	70277	70277					0.19394445798559445
VKVIVDMAN	9	Unmodified	_VKVIVDMAN_					0	0	0			REV__ENST00000463694.1_1_3:58193943-58196633:-|nuORF	REV__ENST00000463694.1_1_3:58193943-58196633:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7807312011719	2	494.778428	987.542302	0.77019	0.00038107	2.7304	0.001351	3.5006	0.001732	494.77966004867045	84.042	2.7013	83.973	82.365	85.067	-0.069313					89	62	2	0	0	0	0.77696	1	8545	8545		31.53	4.7337	1	283830	+		61996	20957	41344	41361	70278	70278					0.04803284713909761
VKVKEDEK	8	Unmodified	_VKVKEDEK_					0	0	0		ENSG00000198157|ENST00000358130|HMGN5	ENSG00000198157|ENST00000358130|HMGN5	ENSG00000198157|ENST00000358130|HMGN5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.757080078125	2	487.779482	973.544411	1.5228	0.00074281	-0.98126	-0.00047864	0.54157	0.00026417	487.77861626535406	24.268	0.39144	23.754	23.533	23.924	-0.51365					14	8	3	0	0	0	0.4196	1	1151	1151		45.952	32.177	1	58902			61997	8246	41345	41362	70279	70279					0.05658036723366422
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8436279296875	2	575.841894	1149.66923	-0.46596	-0.00026832	2.5239	0.0014533	2.0579	0.001185	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.8608	1	9074	9074		34.173	6.0911	1	3411000			61998	1068	41346	41363	70280	70280					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8427124023438	2	575.841894	1149.66923	-0.99797	-0.00057467	2.8055	0.0016155	1.8076	0.0010409	575.8433464319414	90.672	2.8412	90.741	88.754	91.595	0.069328					215	67	4	0	0	0	0.8608	2	9198	9198;9282		34.173	5.0025	1	1885000			61999	1068	41346	41363	70281;70282	70281					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8425903320312	2	575.841894	1149.66923	-0.99735	-0.00057431	2.7404	0.001578	1.743	0.0010037	575.8433532789343	92.554	5.9858	92.624	91.234	97.22	0.069862					413	141	5	0	0	0	0.6116	4	9694	9538;9562;9694;9706		49.442	8.8689	1	5638300			62000	1068	41346	41363	70283;70284;70285;70286	70285					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8427124023438	2	575.841894	1149.66923	1.6833	0.00096931	0.25656	0.00014774	1.9399	0.0011171	575.8419126202111	90.702	2.7581	90.632	88.716	91.474	-0.069977					216	65	4	0	0	0	0.8608	3	9485	9485;9534;9559		34.173	2.2177	1	1939000			62001	1068	41346	41363	70287;70288;70289	70287					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8428955078125	2	575.841894	1149.66923	1.9391	0.0011166	-0.2647	-0.00015242	1.6745	0.00096422	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.8608	3	9737	9737;9870;9931		34.173	8.5985	1	5986700			62002	1068	41346	41363	70290;70291;70292	70290					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8427734375	2	575.841894	1149.66923	0.91496	0.00052687	0.96246	0.00055422	1.8774	0.0010811	575.8423131361362	90.432	2.8004	90.479	88.667	91.467	0.046448					215	66	4	0	0	0	0.77314	1	9380	9380		40.778	0.20554	1	2025300			62003	1068	41346	41363	70293	70293					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8430786132812	2	575.841894	1149.66923	0.91732	0.00052823	0.78637	0.00045282	1.7037	0.00098106	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.77314	4	9629	9581;9629;9677;9726		40.778	8.8233	1	5468500			62004	1068	41346	41363	70294;70295;70296;70297	70295					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8428955078125	2	575.841894	1149.66923	0.60609	0.00034901	1.2709	0.00073183	1.877	0.0010808	575.8424991803296	90.338	2.6197	90.554	88.675	91.295	0.21561					215	62	4	0	0	0	0.74274	3	9048	9048;9084;9108		42.396	7.2441	1	2381900			62005	1068	41346	41363	70298;70299;70300	70298					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8425903320312	2	575.841894	1149.66923	0.61103	0.00035186	1.1234	0.0006469	1.7344	0.00099876	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.77314	2	9394	9394;9560		40.778	8.8233	1	6623700			62006	1068	41346	41363	70301;70302	70301					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8434448242188	2	575.841894	1149.66923	0.78302	0.0004509	1.062	0.00061152	1.845	0.0010624	575.8423757005949	90.383	2.7025	90.537	88.725	91.427	0.15388					214	64	4	0	0	0	0.4892	1	9105	9105		56.721	24.766	1	2399100			62007	1068	41346	41363	70303	70303					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.843017578125	2	575.841894	1149.66923	0.80402	0.00046299	0.89767	0.00051691	1.7017	0.0009799	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.64457	7	9519	9325;9337;9373;9446;9482;9506;9519		47.657	11.629	1	6947200			62008	1068	41346	41363	70304;70305;70306;70307;70308;70309;70310	70310					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.842529296875	2	575.841894	1149.66923	-1.368	-0.00078774	3.3005	0.0019005	1.9325	0.0011128	575.8436459594299	90.372	2.9394	90.548	88.581	91.52	0.1758					221	69	4	0	0	0	0.77314	1	8992	8992		40.778	0.20554	1	2135900			62009	1068	41346	41363	70311	70311					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8428344726562	2	575.841894	1149.66923	-1.368	-0.00078773	3.1087	0.0017901	1.7407	0.0010024	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.77314	3	9226	9203;9226;9286		40.778	8.8233	1	6121300			62010	1068	41346	41363	70312;70313;70314	70313					0.10038630658914371
VKVLAKPHQM	10	Unmodified	_VKVLAKPHQM_					0	0	0		ENSG00000060709|ENST00000690449|RIMBP2;nc|ENSG00000060709|O15034-2|RIMBP2;nc|ENSG00000060709|O15034|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	ENSG00000060709|ENST00000690449|RIMBP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.8425903320312	2	575.841894	1149.66923	0.47616	0.00027419	0.47457	0.00027328	0.95073	0.00054747	575.8420203793453	90.225	2.3894	90.676	89.242	91.632	0.45058					94	60	2	0	0	0	0.8608	1	10783	10783		34.173	1.3601	1	1893600			62011	1068	41346	41363	70315	70315					0.10038630658914371
VKVLEKATM	9	Unmodified	_VKVLEKATM_					0	0	0			REV__ENSG00000198838|ENST00000634891|RYR3	REV__ENSG00000198838|ENST00000634891|RYR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.8036193847656	2	509.801903	1017.58925	1.253	0.0006388	2.312	0.0011787	3.5651	0.0018175	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.76764	1	8902	8902		34.173	7.4796	1	3243500	+		62012	23393	41347	41364	70316	70316					0.08116144265056846
VKVLGILA	8	Unmodified	_VKVLGILA_					0	0	0		ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7852783203125	2	406.783839	811.553125	-0.045049	-1.8325E-05	3.807	0.0015486	3.7619	0.0015303	406.78524079935227	33.287	0.97472	33.291	32.894	33.869	0.0030785					79	22	4	0	0	0	0.86288	1	1876	1876		26.796	6.3143	1	346170			62013	7350	41348	41365	70317	70317					0.1398105515052066
VKVLGILA	8	Unmodified	_VKVLGILA_					0	0	0		ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7851867675781	2	406.783839	811.553125	2.2777	0.00092654	1.5329	0.00062356	3.8106	0.0015501	406.7843315655164	31.947	2.0861	31.94	30.816	32.902	-0.0061474					172	49	4	0	0	0	0.81724	1	1739	1739		14.664	0	1	1965300			62014	7350	41348	41365	70318	70318					0.1398105515052066
VKVLGILA	8	Unmodified	_VKVLGILA_					0	0	0		ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7847900390625	2	406.783839	811.553125	1.6742	0.00068103	2.1022	0.00085513	3.7764	0.0015362	406.78458476785784	34.278	1.4525	34.281	33.794	35.247	0.0026054					117	34	4	0	0	0	0.81724	1	2199	2199		14.664	0	1	2275400			62015	7350	41348	41365	70319	70319					0.1398105515052066
VKVLGILA	8	Unmodified	_VKVLGILA_					0	0	0		ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78521728515625	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.143	1	31.255	30.755	31.755	0.11198								0	0	0	0.31173	1	1413	1413		8.8223	0	1				62016	7350	41348	41365	70320	70320					0.1398105515052066
VKVLGILA	8	Unmodified	_VKVLGILA_					0	0	0		ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7852478027344	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.542	1	32.654	32.154	33.154	0.11117								0	0	0	0.30125	1	1532	1532		20.482	0	1				62017	7350	41348	41365	70321	70321					0.1398105515052066
VKVLGILA	8	Unmodified	_VKVLGILA_					0	0	0		ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.7854919433594	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.334	1	33.444	32.944	33.944	0.10991								0	0	0	0.29353	1	1618	1618		28.254	0	1				62018	7350	41348	41365	70322	70322					0.1398105515052066
VKVLGILA	8	Unmodified	_VKVLGILA_					0	0	0		ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2966003417969	2	406.783839	811.553125	0.17595	7.1573E-05	4.0073	0.0016301	4.1833	0.0017017	406.78532549704414	38.885	0.3582	38.973	38.786	39.145	0.088375					15	9	2	0	0	0	0.4196	1	2327	2327		4.6817	0	1	31938			62019	7350	41348	41365	70323	70323					0.1398105515052066
VKVLGILA	8	Unmodified	_VKVLGILA_					0	0	0		ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7852783203125	2	406.783839	811.553125	0.068503	2.7866E-05	3.6937	0.0015025	3.7622	0.0015304	406.7851911107635	31.827	2.2884	31.81	30.549	32.838	-0.017466					273	113	4	0	0	0	0.81724	1	1439	1439		14.664	0	1	1817700			62020	7350	41348	41365	70324	70324					0.1398105515052066
VKVLGILA	8	Unmodified	_VKVLGILA_					0	0	0		ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	ENSG00000180817|ENST00000373232|PPA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.78521728515625	2	406.783839	811.553125	0.56827	0.00023116	3.0171	0.0012273	3.5854	0.0014585	406.78493901596437	31.598	1.6437	31.678	30.856	32.5	0.079834					110	37	4	0	0	0	0.82419	1	2114	2114		13.775	0	1	5409400			62021	7350	41348	41365	70325	70325					0.1398105515052066
VKVLKSHLM	9	Unmodified	_VKVLKSHLM_					0	0	0		ENST00000347970.7_1_15:102190337-102192476:-|nuORF	ENST00000347970.7_1_15:102190337-102192476:-|nuORF	ENST00000347970.7_1_15:102190337-102192476:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.3274536132812	2	527.825712	1053.63687	-0.037912	-2.0011E-05	1.3672	0.00072165	1.3293	0.00070163	528.3271445150085	44.341	1.4174	44.791	44.083	45.5	0.45025					51	34	2	0	0	0	0.76764	1	4059	4059		34.173	7.4796	1	984100			62022	10315	41349	41366	70326	70326					0.11219843255912565
VKVLMVRFN	9	Unmodified	_VKVLMVRFN_					0	0	0			REV__nc|ENSG00000106633|P35557-3|GCK	REV__nc|ENSG00000106633|P35557-3|GCK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.332763671875	2	553.331162	1104.64777	1.115	0.00061697	1.1998	0.0006639	2.3148	0.0012809	553.3316729497465	96.557	1.6944	96.962	96.464	98.158	0.40498					120	40	4	0	0	0	0.7932	1	11555	11555		23.042	1.0826	1	3081200	+		62023	17621	41350	41367	70327	70327					0.09963245630206075
VKVLSKRKFF	10	Unmodified	_VKVLSKRKFF_					0	0	0		ENST00000370008.3_1_1:109351697-109351763:+|nuORF	ENST00000370008.3_1_1:109351697-109351763:+|nuORF	ENST00000370008.3_1_1:109351697-109351763:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3794555664062	2	626.400433	1250.78631	0.92622	0.00058019	2.7867	0.0017456	3.713	0.0023258	626.9012397682033	105.39	0.61543	105.49	105.15	105.77	0.10766					35	15	4	0	0	0	0.37624	1	11188	11188		25.574	9.9322	1	727960			62024	10632	41351	41368	70328	70328					0.17095111870162327
VKVMHKFSN	9	Unmodified	_VKVMHKFSN_					0	0	0		nc|ENSG00000197008|P52744|ZNF138;nc|ENSG00000197008|P52744-2|ZNF138;ENSG00000197008|ENST00000307355|ZNF138	nc|ENSG00000197008|P52744|ZNF138	nc|ENSG00000197008|P52744|ZNF138	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3173217773438	2	545.297319	1088.58008	-0.33657	-0.00018353	0.17033	9.2882E-05	-0.16623	-9.0646E-05	545.79737521684	90.446	0.73284	90.515	90.385	91.118	0.069328					20	17	2	0	0	0	0.20789	1	9352	9352		42.396	14.514	1	131270			62025	8122	41352	41369	70329	70329					0.03933795699413167
VKVNFPLRF	9	Unmodified	_VKVNFPLRF_					0	0	0			REV__nc|ENSG00000172673|Q8N1K5-3|THEMIS	REV__nc|ENSG00000172673|Q8N1K5-3|THEMIS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3408203125	2	560.337301	1118.66005	3.1454	0.0017625	2.2738	0.0012741	5.4192	0.0030366	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.7932	1	12840	12840		23.042	1.0826	1	151040	+		62026	21847	41353	41370	70330	70330					0.10546605364879724
VKVNFPLRF	9	Unmodified	_VKVNFPLRF_					0	0	0			REV__nc|ENSG00000172673|Q8N1K5-3|THEMIS	REV__nc|ENSG00000172673|Q8N1K5-3|THEMIS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8428955078125	2	560.337301	1118.66005	1.3844	0.00077572	4.2374	0.0023744	5.6218	0.0031501	560.3396080868185	114.62	2.2118	114.64	113.84	116.05	0.026466					86	62	2	0	0	0	0.7932	1	12535	12535		23.042	3.0457	1	96310	+		62027	21847	41353	41370	70331	70331					0.10546605364879724
VKVNKGSKAS	10	Unmodified	_VKVNKGSKAS_					0	0	0		nc|ENSG00000145700|Q8N7Z5|ANKRD31;ENSG00000145700|ENST00000506364|ANKRD31	nc|ENSG00000145700|Q8N7Z5|ANKRD31	nc|ENSG00000145700|Q8N7Z5|ANKRD31	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.3058166503906	2	509.306198	1016.59784	0.74223	0.00037802	-1.438	-0.00073237	-0.69576	-0.00035435	509.305324720209	92.968	1.4156	93.127	92.667	94.082	0.15875					103	33	4	0	0	0	0.86698	1	9454	9454		28.081	0.19925	1	2131200			62028	4783	41354	41371	70332	70332					0.09020834225896124
VKVNKYIGK	9	Unmodified	_VKVNKYIGK_					0	0	0		ENSG00000107890|ENST00000376087|ANKRD26;nc|ENSG00000107890|Q9UPS8-2|ANKRD26	ENSG00000107890|ENST00000376087|ANKRD26	ENSG00000107890|ENST00000376087|ANKRD26	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8269653320312	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.78058	1	10125	10125		30.504	3.7075	1	15330000			62029	2378	41355	41372	70333	70333					0.12214899127980061
VKVNRLES	8	Unmodified	_VKVNRLES_					0	0	0		ENST00000513666.5_1_5:96073558-96090478:+|nuORF	ENST00000513666.5_1_5:96073558-96090478:+|nuORF	ENST00000513666.5_1_5:96073558-96090478:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7800598144531	2	472.779816	943.545079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.079	1	34.125	33.625	34.625	0.045849								0	0	0	0.29344	1	1697	1697		31.955	1.6371	1				62030	13057	41356	41373	70334	70334					0.07104876163077734
VKVNWATTP	9	Unmodified	_VKVNWATTP_					0	0	0		chr2:70229318-70230761|51|24.65|0.0|21.23|-|0|TIA1,None|4;ENST00000496452.5_1_2:70456348-70475673:-|nuORF;ENST00000481650.1_1_2:70456348-70475673:-|nuORF;nc|ENSG00000116001|P31483-3|TIA1;nc|ENSG00000116001|P31483-2|TIA1;ENSG00000151923|ENST00000436547|TIAL1;ENSG00000116001|ENST00000433529|TIA1;nc|ENSG00000151923|Q01085-2|TIAL1;ENST00000489822.5_1_10:121336540-121356247:-|nuORF	chr2:70229318-70230761|51|24.65|0.0|21.23|-|0|TIA1,None|4	chr2:70229318-70230761|51|24.65|0.0|21.23|-|0|TIA1,None|4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	508.27996826171875	2	508.282192	1014.54983	0.22565	0.0001147	-4.0704	-0.0020689	-3.8448	-0.0019542	508.28004300112207	88.286	4.1579	88.336	86.949	91.107	0.050415					316	98	4	0	0	0	0.67345	1	9115	9115		42.396	4.5846	1	1820400			62031	348	41357	41374	70335	70335					0.04313760305831238
VKVPDLPRRE	10	Unmodified	_VKVPDLPRRE_					0	0	0			REV__nc|ENSG00000188848|Q6ZU67-4|BEND4	REV__nc|ENSG00000188848|Q6ZU67-4|BEND4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.5748291015625	3	403.575178	1207.70371	-0.098768	-3.986E-05	-1.4245	-0.00057487	-1.5232	-0.00061473	403.5746289633053	82.033	2.7416	82.523	81.734	84.476	0.48983					221	66	4	0	0	0	0.69342	1	9550	9550		45.022	5.149	1	16485000	+		62032	23037	41358	41375	70336	70336					0.10816170071393572
VKVPEVDVRG	10	Unmodified	_VKVPEVDVRG_					0	0	0		ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	ENSG00000124942|ENST00000378024|AHNAK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	549.3217163085938	2	549.319306	1096.62406	-0.48303	-0.00026534	-2.2746	-0.0012495	-2.7576	-0.0015148	549.3179926126767	101.27	2.2263	101.27	100.73	102.96	0					128	54	4	0	0	0	0.8608	1	10402	10402		34.173	2.6427	1	1196600			62033	3371	41359	41376	70337	70337					0.07961103397360603
VKVPGIVR	8	Unmodified	_VKVPGIVR_					0	0	0		nc|ENSG00000011021|P51797-6|CLCN6;ENSG00000011021|ENST00000346436|CLCN6;nc|ENSG00000011021|P51797-5|CLCN6;nc|ENSG00000011021|P51797-4|CLCN6;nc|ENSG00000011021|P51797-2|CLCN6;nc|ENSG00000011021|P51797-3|CLCN6	nc|ENSG00000011021|P51797-6|CLCN6	nc|ENSG00000011021|P51797-6|CLCN6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.25152587890625	2	434.292362	866.570172	-1.5785	-0.00068554	1.8666	0.00081066	0.28809	0.00012512	434.293082317046	80.834	0.60208	80.971	80.621	81.223	0.13701					21	13	2	0	0	0	0.4196	1	7680	7680		17.365	0	1	66496			62034	777	41360	41377	70338	70338					0.13154975756322074
VKVPGIVR	8	Unmodified	_VKVPGIVR_					0	0	0		nc|ENSG00000011021|P51797-6|CLCN6;ENSG00000011021|ENST00000346436|CLCN6;nc|ENSG00000011021|P51797-5|CLCN6;nc|ENSG00000011021|P51797-4|CLCN6;nc|ENSG00000011021|P51797-2|CLCN6;nc|ENSG00000011021|P51797-3|CLCN6	nc|ENSG00000011021|P51797-6|CLCN6	nc|ENSG00000011021|P51797-6|CLCN6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.2897644042969	2	434.292362	866.570172	0.17838	7.747E-05	0.048426	2.1031E-05	0.22681	9.8501E-05	434.292301495122	76.664	0.70924	77.064	76.616	77.325	0.3997					39	22	2	0	0	0	0.87479	1	8719	8719		30.504	3.7075	1	683460			62035	777	41360	41377	70339	70339					0.13154975756322074
VKVPGIVR	8	Unmodified	_VKVPGIVR_					0	0	0		nc|ENSG00000011021|P51797-6|CLCN6;ENSG00000011021|ENST00000346436|CLCN6;nc|ENSG00000011021|P51797-5|CLCN6;nc|ENSG00000011021|P51797-4|CLCN6;nc|ENSG00000011021|P51797-2|CLCN6;nc|ENSG00000011021|P51797-3|CLCN6	nc|ENSG00000011021|P51797-6|CLCN6	nc|ENSG00000011021|P51797-6|CLCN6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.291748046875	2	434.292362	866.570172	0.20945	9.0961E-05	-0.029853	-1.2965E-05	0.17959	7.7996E-05	434.2922426111118	76.525	1.2695	77.093	76.184	77.453	0.56836					55	36	2	0	0	0	0.87922	1	8720	8720		31.955	5.1588	1	779900			62036	777	41360	41377	70340	70340					0.13154975756322074
VKVPILLILVT	11	Unmodified	_VKVPILLILVT_					0	0	0		ENSG00000178789|ENST00000392621|CD300LB	ENSG00000178789|ENST00000392621|CD300LB	ENSG00000178789|ENST00000392621|CD300LB	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3663940429688	2	604.423042	1206.83153	-0.169	-0.00010215	-2.6365	-0.0015936	-2.8055	-0.0016957	604.421315228181	104.64	0.16406	104.64	104.58	104.75	0					6	3	2	0	0	0	0.17975	1	10771	10771		8.6937	0	1	41408			62037	7223	41361	41378	70341	70341					0.23638917612697696
VKVPISLSI	9	Unmodified	_VKVPISLSI_					0	0	0		ENSG00000125999|ENST00000253354|BPIFB1	ENSG00000125999|ENST00000253354|BPIFB1	ENSG00000125999|ENST00000253354|BPIFB1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.97412109375	2	478.312961	954.611368	-0.91359	-0.00043698	3.0898	0.0014779	2.1762	0.0010409	478.31434000161516	48.984	0.48782	49.01	48.843	49.331	0.025574					13	11	2	0	0	0	0.20789	1	3800	3800		26.693	3.6504	1	33990			62038	3436	41362	41379	70342	70342					0.13224692005132965
VKVPKTPQQQV	11	Unmodified	_VKVPKTPQQQV_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3757934570312	2	626.374612	1250.73467	-0.30255	-0.00018951	3.6646	0.0022954	3.3621	0.0021059	626.3768252633085	44.934	1.1305	44.93	44.576	45.706	-0.0041618					49	25	3	0	0	0	0.7144	1	3545	3545		29.17	1.0886	1	181350	+		62039	18464	41363	41380	70343	70343					0.1193332338559685
VKVQPRRPKSA	11	Unmodified	_VKVQPRRPKSA_					0	0	0		ENST00000276431.8_1_8:22926459-22926618:-|nuORF	ENST00000276431.8_1_8:22926459-22926618:-|nuORF	ENST00000276431.8_1_8:22926459-22926618:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.3693237304688	2	633.39367	1264.77279	-0.15151	-9.5963E-05	-1.6046	-0.0010163	-1.7561	-0.0011123	633.3913115189521	97.689	0.20655	97.746	97.632	97.839	0.056831					6	4	2	0	0	0	0.1731	1	10293	10293		21.686	0	1	88132			62040	9602	41364	41381	70344	70344					0.15099254090932845
VKVQRWVP	8	Unmodified	_VKVQRWVP_					0	0	0		ENST00000531257.1_1_11:126143236-126143371:+|nuORF	ENST00000531257.1_1_11:126143236-126143371:+|nuORF	ENST00000531257.1_1_11:126143236-126143371:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3079528808594	2	506.308544	1010.60253	0.46799	0.00023695	0.70005	0.00035444	1.168	0.00059138	506.3090292156969	63.021	1.2614	63.143	62.591	63.852	0.12252					86	56	2	0	0	0	0.86791	1	5467	5467		28.254	2.8041	1	130540			62041	13356	41365	41382	70345	70345					0.0976576315931652
VKVRKPHIL	9	Unmodified	_VKVRKPHIL_					0	0	0		ENST00000361131.4_1_6:150570925-150571015:+|nuORF	ENST00000361131.4_1_6:150570925-150571015:+|nuORF	ENST00000361131.4_1_6:150570925-150571015:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3165893554688	2	545.366393	1088.71823	0.15188	8.2829E-05	-1.2331	-0.00067251	-1.0813	-0.00058968	545.3657320960571	90.028	0.1277	90.241	90.169	90.296	0.21271					4	2	2	0	0	0	0.20789	1	9010	9010		24.203	11.996	1	46071			62042	10465	41366	41383	70346	70346					0.1774228701017364
VKVRPVLLP	9	Unmodified	_VKVRPVLLP_					0	0	0			REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	REV__nc|ENSG00000145734|A6H8Y1-2|BDP1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	510.8558349609375	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.32	1	114.38	113.88	114.88	0.061073								0	0	0	0.35896	1	12222	12222		12.207	3.9756	1		+		62043	19963	41367	41384	70347	70347					0.17648079887305812
VKVRRATII	9	Unmodified	_VKVRRATII_					0	0	0		ENST00000485500.1_1_3:49065635-49065977:-|nuORF;ENST00000496837.1_1_3:49065635-49066789:-|nuORF	ENST00000485500.1_1_3:49065635-49065977:-|nuORF	ENST00000485500.1_1_3:49065635-49065977:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.3550415039062	2	528.356025	1054.6975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.28	1	118.28	117.78	118.78	0								0	0	0	0.36238	1	12053	12053		10.265	2.575	1				62044	12556	41368	41385	70348	70348					0.17233696630501072
VKVSAPPMA	9	Unmodified	_VKVSAPPMA_					0	0	0			REV__ENSG00000183018|ENST00000329078|SPNS2	REV__ENSG00000183018|ENST00000329078|SPNS2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2743225097656	2	450.254588	898.494624	-0.14131	-6.3627E-05	0.77247	0.00034781	0.63116	0.00028418	450.2535908378452	93.4	0.44772	93.47	93.176	93.624	0.069603					18	10	2	0	0	0	0.20789	1	9711	9711		34.173	7.3764	1	201210	+		62045	22566	41369	41386	70349	70349					0.04131630513722939
VKVSAPPMA	9	Unmodified	_VKVSAPPMA_					0	0	0			REV__ENSG00000183018|ENST00000329078|SPNS2	REV__ENSG00000183018|ENST00000329078|SPNS2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2742919921875	2	450.254588	898.494624	1.7695	0.00079673	2.2508	0.0010134	4.0203	0.0018102	450.2552652811895	93.709	0.1739	93.648	93.539	93.713	-0.06144					6	3	2	0	0	0	0.20789	1	9940	9940		40.778	20.296	1	30347	+		62046	22566	41369	41386	70350	70350					0.04131630513722939
VKVSDRGKPPR	11	Unmodified	_VKVSDRGKPPR_					0	0	0		ENST00000511044.1_1_5:141242715-141245657:-|nuORF;nc|ENSG00000156453|Q08174|PCDH1;ENSG00000156453|ENST00000287008|PCDH1	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.869140625	2	619.870028	1237.7255	1.2689	0.00078657	-2.206	-0.0013675	-0.93712	-0.00058089	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.66929	1	9868	9868		36.447	3.6343	1	6493200			62047	5378	41370	41387	70351	70351					0.11614974819917734
VKVSDRGKPPR	11	Unmodified	_VKVSDRGKPPR_					0	0	0		ENST00000511044.1_1_5:141242715-141245657:-|nuORF;nc|ENSG00000156453|Q08174|PCDH1;ENSG00000156453|ENST00000287008|PCDH1	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8695068359375	2	619.870028	1237.7255	-1.2246	-0.00075908	0.04402	2.7286E-05	-1.1806	-0.0007318	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.6493	2	9628	9591;9628		38.754	14.234	1	3118800			62048	5378	41370	41387	70352;70353	70353					0.11614974819917734
VKVSDRGKPPR	11	Unmodified	_VKVSDRGKPPR_					0	0	0		ENST00000511044.1_1_5:141242715-141245657:-|nuORF;nc|ENSG00000156453|Q08174|PCDH1;ENSG00000156453|ENST00000287008|PCDH1	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	ENST00000511044.1_1_5:141242715-141245657:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8692626953125	2	619.870028	1237.7255	-1.2246	-0.00075909	0.27155	0.00016833	-0.95304	-0.00059076	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.68532	1	9754	9754		33.922	11.342	1	6224400			62049	5378	41370	41387	70354	70354					0.11614974819917734
VKVSEPPL	8	Unmodified	_VKVSEPPL_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7596740722656	2	434.760561	867.506569	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.526	1	87.696	87.196	88.196	0.16923								0	0	0	0.29816	1	8603	8603		38.806	5.2906	1				62050	5333	41371	41388	70355	70355					0.06751570528570028
VKVSFHESL	9	Unmodified	_VKVSFHESL_					0	0	0			REV__ENSG00000036448|ENST00000262113|MYOM2	REV__ENSG00000036448|ENST00000262113|MYOM2	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3036499023438	2	523.287474	1044.5604	-0.80008	-0.00041867	-4.3306	-0.0022662	-5.1307	-0.0026848	523.2864061276447	89.073	0.68098	89.073	88.791	89.472	0					29	15	3	0	0	0	0.20789	1	8622	8622		39.253	5.3312	1	109290	+		62051	16292	41372	41389	70356	70356					0.03989742960266085
VKVSKAQAQS	10	Unmodified	_VKVSKAQAQS_					0	0	0		ENST00000431295.1_1_1:153968319-153968433:+|nuORF	ENST00000431295.1_1_1:153968319-153968433:+|nuORF	ENST00000431295.1_1_1:153968319-153968433:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.303655	1044.59276	0.69703	0.00036476	-1.0638	-0.00055667	-0.36673	-0.00019191	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.76096	1	8594	8594		41.427	4.9799	1	3801600			62052	11645	41373	41390	70357	70357					0.07224530363282611
VKVSKKEG	8	Unmodified	_VKVSKKEG_					0	0	0			REV__ENSG00000075568|ENST00000186436|TMEM131	REV__ENSG00000075568|ENST00000186436|TMEM131	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.77142333984375	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.80308	1	2959	2959		16.473	0.83134	1	9763800	+		62053	16713	41374	41391	70358	70358					0.0865437527713766
VKVSLTKGFQ	10	Unmodified	_VKVSLTKGFQ_					0	0	0			REV__ENST00000525751.5_1_1:40034389-40035574:-|nuORF	REV__ENST00000525751.5_1_1:40034389-40035574:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8303833007812	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.86348	1	9273	9273		31.53	1.0262	1	5219600	+		62054	16994	41375	41392	70359	70359					0.10094577919790026
VKVSLTKGFQ	10	Unmodified	_VKVSLTKGFQ_					0	0	0			REV__ENST00000525751.5_1_1:40034389-40035574:-|nuORF	REV__ENST00000525751.5_1_1:40034389-40035574:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8301391601562	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.80179	2	9038	9014;9038		39.253	11.371	1	6029400	+		62055	16994	41375	41392	70360;70361	70361					0.10094577919790026
VKVSLTKGFQ	10	Unmodified	_VKVSLTKGFQ_					0	0	0			REV__ENST00000525751.5_1_1:40034389-40035574:-|nuORF	REV__ENST00000525751.5_1_1:40034389-40035574:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8312377929688	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.86348	1	9100	9100		31.53	1.2121	1	5453100	+		62056	16994	41375	41392	70362	70362					0.10094577919790026
VKVSLTKGFQ	10	Unmodified	_VKVSLTKGFQ_					0	0	0			REV__ENST00000525751.5_1_1:40034389-40035574:-|nuORF	REV__ENST00000525751.5_1_1:40034389-40035574:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8301391601562	2	553.832049	1105.64954	-1.2274	-0.00067979	-2.3284	-0.0012895	-3.5558	-0.0019693	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.86348	1	10388	10388		31.53	3.6476	1	1825600	+		62057	16994	41375	41392	70363	70363					0.10094577919790026
VKVTHQPPL	9	Unmodified	_VKVTHQPPL_					0	0	0		ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80328369140625	2	509.805834	1017.59712	-0.054506	-2.7787E-05	-4.0835	-0.0020818	-4.1381	-0.0021096	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.71772	1	8491	8491		39.253	8.7492	1	828920			62058	3139	41376	41393	70364	70364					0.08902039576844345
VKVTHQPPL	9	Unmodified	_VKVTHQPPL_					0	0	0		ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8036804199219	2	509.805834	1017.59712	-0.054339	-2.7702E-05	-4.0902	-0.0020852	-4.1445	-0.0021129	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.76764	1	8646	8646		34.173	0	1	2906900			62059	3139	41376	41393	70365	70365					0.08902039576844345
VKVTHQPPL	9	Unmodified	_VKVTHQPPL_					0	0	0		ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	509.8036804199219	2	509.805834	1017.59712	0.075306	3.8391E-05	-4.2119	-0.0021473	-4.1366	-0.0021089	509.80363689374167	84.213	2.6407	84.272	82.774	85.415	0.05925					180	60	4	0	0	0	0.44421	2	8556	8460;8556		54.776	7.119	1	958280			62060	3139	41376	41393	70366;70367	70367					0.08902039576844345
VKVTHQPPL	9	Unmodified	_VKVTHQPPL_					0	0	0		ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	ENSG00000120645|ENST00000538872|IQSEC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8038024902344	2	509.805834	1017.59712	-1.541	-0.00078559	-2.6088	-0.00133	-4.1497	-0.0021156	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.67345	1	8536	8536		42.396	4.5846	1	2989000			62061	3139	41376	41393	70368	70368					0.08902039576844345
VKVVGPSII	9	Unmodified	_VKVVGPSII_					0	0	0			REV__nc|ENSG00000144278|Q8IUC8-3|GALNT13	REV__nc|ENSG00000144278|Q8IUC8-3|GALNT13	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3006591796875	2	456.299853	910.585153	-1.7927	-0.00081802	3.97	0.0018115	2.1773	0.00099349	456.30151188064457	45.052	1.9056	45.052	44.154	46.06	0					117	46	3	0	0	0	0.77546	1	3302	3302		31.955	8.9124	1	498210	+		62062	29905	41377	41394	70369	70369					0.1262842283365444
VKVVGPSII	9	Unmodified	_VKVVGPSII_					0	0	0			REV__nc|ENSG00000144278|Q8IUC8-3|GALNT13	REV__nc|ENSG00000144278|Q8IUC8-3|GALNT13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30010986328125	2	456.299853	910.585153	-0.23513	-0.00010729	2.1872	0.000998	1.952	0.00089071	456.3007121817001	45.145	1.6994	45.141	44.498	46.198	-0.0041618					86	39	3	0	0	0	0.78058	1	3602	3602		30.504	5.0535	1	438290	+		62063	29905	41377	41394	70370	70370					0.1262842283365444
VKVVGPSII	9	Unmodified	_VKVVGPSII_					0	0	0			REV__nc|ENSG00000144278|Q8IUC8-3|GALNT13	REV__nc|ENSG00000144278|Q8IUC8-3|GALNT13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.30072021484375	2	456.299853	910.585153	-0.032958	-1.5039E-05	2.9428	0.0013428	2.9098	0.0013278	456.3010618832383	34.27	2.0114	34.48	34.107	36.119	0.21003					105	50	4	0	0	0	0.67345	2	2512	2512;2521		42.396	1.8235	1	1566600	+		62064	29905	41377	41394	70371;70372	70371					0.1262842283365444
VKVVHLSPFRG	11	Unmodified	_VKVVHLSPFRG_					0	0	0			REV__ENSG00000141965|ENST00000269856|FEM1A	REV__ENSG00000141965|ENST00000269856|FEM1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8690795898438	2	619.87204	1237.72953	-0.30615	-0.00018977	-3.8344	-0.0023768	-4.1405	-0.0025666	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.69248	1	10002	10002		32.751	3.601	1	4796900	+		62065	19716	41378	41395	70373	70373					0.12017064313636183
VKVVPVDLQVQ	11	Unmodified	_VKVVPVDLQVQ_					0	0	0			REV__ENSG00000180198|ENST00000683442|RCC1	REV__ENSG00000180198|ENST00000683442|RCC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.5839538574219	3	408.583451	1222.72852	1.3583	0.00055498	0.17962	7.3388E-05	1.5379	0.00062837	408.58343909999354	25.141	0.70901	24.813	24.521	25.23	-0.32825					45	15	4	0	0	0	0.71207	1	1255	1255		29.551	0	1	443010	+		62066	22380	41379	41396	70374	70374					0.12606805154064205
VKVVWRGL	8	Unmodified	_VKVVWRGL_					0	0	0			REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8053283691406	2	478.805637	955.596721	-1.7576	-0.00084154	2.8169	0.0013487	1.0593	0.0005072	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.86288	1	2441	2441		26.796	3.7536	1	336090	+		62067	29210	41380	41397	70375	70375					0.11714664647661266
VKVVWRGL	8	Unmodified	_VKVVWRGL_					0	0	0			REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8059387207031	2	478.805637	955.596721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.573	1	42.573	42.073	43.073	0								0	0	0	0.29498	1	2961	2961		26.796	2.5934	1		+		62068	29210	41380	41397	70376	70376					0.11714664647661266
VKVVWRGL	8	Unmodified	_VKVVWRGL_					0	0	0			REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.805908203125	2	478.805637	955.596721	-2.669	-0.0012779	3.4642	0.0016587	0.7952	0.00038075	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.85277	1	2739	2739		25.45	1.2474	1	370420	+		62069	29210	41380	41397	70377	70377					0.11714664647661266
VKVVWRGL	8	Unmodified	_VKVVWRGL_					0	0	0			REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3083801269531	2	478.805637	955.596721	-2.2898	-0.0010963	2.2588	0.0010815	-0.030934	-1.4811E-05	478.80658371263473	41.743	1.2165	41.746	40.986	42.202	0.0034142					57	30	2	0	0	0	0.79929	1	3063	3063		18.324	0	1	281640	+		62070	29210	41380	41397	70378	70378					0.11714664647661266
VKVVWRGL	8	Unmodified	_VKVVWRGL_					0	0	0			REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.8074645996094	2	478.805637	955.596721	-2.3035	-0.001103	2.2501	0.0010774	-0.053459	-2.5596E-05	478.8065191751703	40.757	0.75594	41.347	40.908	41.664	0.58915					57	21	3	0	0	0	0.85277	1	3473	3473		25.45	1.2474	1	3537500	+		62071	29210	41380	41397	70379	70379					0.11714664647661266
VKVWPRRPTG	10	Unmodified	_VKVWPRRPTG_					0	0	0		CON__P12763	CON__P12763	CON__P12763	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.8557739257812	2	598.356557	1194.69856	1.6651	0.0009963	2.883	0.001725	4.548	0.0027213	598.3583175004217	94.283	4.5904	94.715	93.221	97.812	0.4324					199	114	2	0	0	0	0.86218	2	11127	11127;11160		32.812	3.6629	1	27623000		+	62072	592	41381	41398	70380;70381	70380					0.10899910999410167
VKWILSGYGFV	11	Unmodified	_VKWILSGYGFV_					0	0	0			REV__ENSG00000143942|ENST00000295304|CHAC2	REV__ENSG00000143942|ENST00000295304|CHAC2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8924560546875	2	634.855524	1267.69649	0.93434	0.00059317	0.73846	0.00046881	1.6728	0.001062	634.8559669851759	105.6	0.4902	105.71	105.31	105.8	0.10766					21	12	3	0	0	0	0.16388	1	11225	11225		54.776	0	1	312320	+		62073	19857	41382	41399	70382	70382					0.07335437470942452
VKWSRWELEWL	11	Unmodified	_VKWSRWELEWL_					0	0	0			REV__ENST00000266483.6_1_12:34175520-34175571:+|nuORF	REV__ENST00000266483.6_1_12:34175520-34175571:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.275390625	3	511.273388	1530.79833	1.3628	0.00069676	2.1443	0.0010963	3.5071	0.0017931	511.27443320480126	37.027	0.70287	37.513	37.283	37.986	0.48581					49	16	4	0	0	0	0.76892	1	2955	2955		17.833	0.6664	1	1640500	+		62074	24502	41383	41400	70383	70383					0.054166838227047265
VKWTAFVKTE	10	Unmodified	_VKWTAFVKTE_					0	0	0		ENSG00000173114|ENST00000308478|LRRN3	ENSG00000173114|ENST00000308478|LRRN3	ENSG00000173114|ENST00000308478|LRRN3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.5608825683594	3	403.560646	1207.66011	0.70065	0.00028275	-2.2958	-0.0009265	-1.5952	-0.00064374	403.5596050855879	22.48	0.98659	22.545	22.232	23.218	0.064745					76	37	3	0	0	0	0.86446	1	711	711		30.569	1.9921	1	100540			62075	6828	41384	41401	70384	70384					0.06458560574219518
VKYSNLPN	8	Unmodified	_VKYSNLPN_					0	0	0		ENSG00000197748|ENST00000357060|CFAP43;nc|ENSG00000197748|Q8NDM7-2|CFAP43	ENSG00000197748|ENST00000357060|CFAP43	ENSG00000197748|ENST00000357060|CFAP43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	467.7533264160156	2	467.753267	933.491981	-1.5655	-0.00073227	1.4243	0.00066624	-0.14117	-6.6032E-05	467.75393782612105	56.605	0.85083	56.605	56.397	57.248	0					52	39	2	0	0	0	0.89494	1	4861	4861		37.159	0	1	386030			62076	8194	41385	41402	70385	70385					0.022574983804133808
VLAADPGVAG	10	Unmodified	_VLAADPGVAG_					0	0	0			REV__ENSG00000204967|ENST00000530339|PCDHA4	REV__ENSG00000204967|ENST00000530339|PCDHA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.73992919921875	2	435.239993	868.465432	-1.6534	-0.00071961	2.2013	0.0009581	0.54795	0.00023849	435.240689021295	28.601	0.50809	28.67	28.42	28.928	0.06868					58	25	4	0	0	0	0.71042	1	1195	1195		44.117	0.49075	1	211980	+		62077	23532	41386	41403	70386	70386					0.025938094890989305
VLAAFGLPLSA	11	Unmodified	_VLAAFGLPLSA_					0	0	0		ENST00000305877.12_2_22:23658764-23658902:+|nuORF	ENST00000305877.12_2_22:23658764-23658902:+|nuORF	ENST00000305877.12_2_22:23658764-23658902:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2271118164062	2	529.815867	1057.61718	0.55672	0.00029496	-0.48111	-0.0002549	0.075611	4.006E-05	530.3160868253716	29.755	0.46129	29.767	29.426	29.887	0.011229					29	22	2	0	0	0	0.17318	1	1245	1245		32.812	11.865	1	55123			62078	9854	41387	41404	70387	70387					0.09067790516837704
VLAAGVVAVL	10	Unmodified	_VLAAGVVAVL_					0	0	0			REV__nc|ENSG00000188833|Q5MY95-2|ENTPD8	REV__nc|ENSG00000188833|Q5MY95-2|ENTPD8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.3010559082031	2	456.299853	910.585153	-0.11111	-5.0701E-05	2.9884	0.0013636	2.8773	0.0013129	456.3010566410468	35.268	1.48	35.256	34.768	36.248	-0.012203					106	34	4	0	0	0	0.85976	1	2187	2187		35.201	0	1	794600	+		62079	23036	41388	41405	70388	70388					0.1262842283365444
VLAAGVVAVL	10	Unmodified	_VLAAGVVAVL_					0	0	0			REV__nc|ENSG00000188833|Q5MY95-2|ENTPD8	REV__nc|ENSG00000188833|Q5MY95-2|ENTPD8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30133056640625	2	456.299853	910.585153	1.12	0.00051105	1.6845	0.00076862	2.8045	0.0012797	456.3004764571391	34.144	1.6348	34.449	34.076	35.711	0.30495					98	40	4	0	0	0	0.51323	1	2583	2583		54.765	19.564	1	1747200	+		62080	23036	41388	41405	70389	70389					0.1262842283365444
VLAAHGVPRR	10	Unmodified	_VLAAHGVPRR_					0	0	0		ENST00000494512.1_1_14:45722570-45722729:-|nuORF	ENST00000494512.1_1_14:45722570-45722729:-|nuORF	ENST00000494512.1_1_14:45722570-45722729:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.32666015625	2	538.327799	1074.64105	3.5631	0.0019181	-4.3089	-0.0023196	-0.74581	-0.00040149	538.3254567289116	104.65	1.3425	104.61	103.89	105.23	-0.04039					91	31	4	0	0	0	0.85939	1	11580	11580		23.042	2.0956	1	777430			62081	12751	41389	41406	70390	70390					0.10671068793840277
VLAAKAMMLH	10	Unmodified	_VLAAKAMMLH_					0	0	0			REV__ENST00000507805.5_1_5:94852607-94856520:-|nuORF	REV__ENST00000507805.5_1_5:94852607-94856520:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.8035888671875	2	542.803922	1083.59329	0.80945	0.00043937	-1.7527	-0.0009514	-0.94329	-0.00051202	542.8027894421456	33.977	0.65944	34.282	33.994	34.653	0.30494					40	15	3	0	0	0	0.84112	1	2495	2495		37.159	2.9866	1	826440	+		62082	23353	41390	41407	70391	70391					0.05483910487123467
VLAAKRLV	8	Unmodified	_VLAAKRLV_					0	0	0			REV__ENSG00000162302|ENST00000334205|RPS6KA4	REV__ENSG00000162302|ENST00000334205|RPS6KA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3002014160156	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81548	2	7200	7200;7305		20.482	5.8177	1	1921500	+		62083	20803	41391	41408	70392;70393	70392					0.14627262273370434
VLAAKRLV	8	Unmodified	_VLAAKRLV_					0	0	0			REV__ENSG00000162302|ENST00000334205|RPS6KA4	REV__ENSG00000162302|ENST00000334205|RPS6KA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3003234863281	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.80963	1	6669	6669		15.636	0.97212	1	1852500	+		62084	20803	41391	41408	70394	70394					0.14627262273370434
VLAAKVLR	8	Unmodified	_VLAAKVLR_					0	0	0		ENSG00000160221|ENST00000291577|GATD3;nc|ENSG00000160221|P0DPI2-2|GATD3	ENSG00000160221|ENST00000291577|GATD3	ENSG00000160221|ENST00000291577|GATD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2998046875	2	435.300188	868.585822	-0.33292	-0.00014492	0.65367	0.00028454	0.32075	0.00013962	435.30030600334584	75.563	1.7203	75.517	74.991	76.711	-0.045975					102	48	3	0	0	0	0.82419	1	7486	7486		13.775	0.81615	1	492420			62085	5570	41392	41409	70395	70395					0.14627262273370434
VLAAKVLR	8	Unmodified	_VLAAKVLR_					0	0	0		ENSG00000160221|ENST00000291577|GATD3;nc|ENSG00000160221|P0DPI2-2|GATD3	ENSG00000160221|ENST00000291577|GATD3	ENSG00000160221|ENST00000291577|GATD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.30059814453125	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.82464	1	7275	7275		21.702	0	1	1921500			62086	5570	41392	41409	70396	70396					0.14627262273370434
VLAAKVLR	8	Unmodified	_VLAAKVLR_					0	0	0		ENSG00000160221|ENST00000291577|GATD3;nc|ENSG00000160221|P0DPI2-2|GATD3	ENSG00000160221|ENST00000291577|GATD3	ENSG00000160221|ENST00000291577|GATD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.30035400390625	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.83058	1	8430	8430		12.959	0	1	5485100			62087	5570	41392	41409	70397	70397					0.14627262273370434
VLAAPILEVS	10	Unmodified	_VLAAPILEVS_					0	0	0		ENSG00000143107|ENST00000370017|FNDC7	ENSG00000143107|ENST00000370017|FNDC7	ENSG00000143107|ENST00000370017|FNDC7	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3083801269531	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.585	1	46.585	46.085	47.085	0								0	0	0	0.45132	1	3515	3515		44.117	0	1				62088	4601	41393	41410	70398	70398					0.09632084279917308
VLAAPILEVS	10	Unmodified	_VLAAPILEVS_					0	0	0		ENSG00000143107|ENST00000370017|FNDC7	ENSG00000143107|ENST00000370017|FNDC7	ENSG00000143107|ENST00000370017|FNDC7	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.306640625	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.736	1	54.711	54.211	55.211	-0.025955								0	0	0	0.45132	1	4951	4951		23.042	0	1				62089	4601	41393	41410	70399	70399					0.09632084279917308
VLAAPILEVS	10	Unmodified	_VLAAPILEVS_					0	0	0		ENSG00000143107|ENST00000370017|FNDC7	ENSG00000143107|ENST00000370017|FNDC7	ENSG00000143107|ENST00000370017|FNDC7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3087158203125	2	506.307875	1010.6012	0.3191	0.00016156	2.0004	0.0010128	2.3195	0.0011744	506.3087607672274	46.383	1.7392	46.421	45.728	47.467	0.038181					61	47	2	0	0	0	0.86452	1	3392	3392		30.504	1.3541	1	157780			62090	4601	41393	41410	70400	70400					0.09632084279917308
VLAAPILEVS	10	Unmodified	_VLAAPILEVS_					0	0	0		ENSG00000143107|ENST00000370017|FNDC7	ENSG00000143107|ENST00000370017|FNDC7	ENSG00000143107|ENST00000370017|FNDC7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3090515136719	2	506.307875	1010.6012	-0.4302	-0.00021782	2.8218	0.0014287	2.3916	0.0012109	506.3092413243001	54.85	1.3019	54.801	54.615	55.917	-0.049271					56	42	2	0	0	0	0.85939	1	4580	4580		23.042	0	1	188390			62091	4601	41393	41410	70401	70401					0.09632084279917308
VLAARAKP	8	Unmodified	_VLAARAKP_					0	0	0			REV__ENSG00000170049|ENST00000303790|KCNAB3	REV__ENSG00000170049|ENST00000303790|KCNAB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2675476074219	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.81724	1	2365	2365		14.664	0	1	268720	+		62092	21628	41394	41411	70402	70402					0.10394116205179671
VLAAVLWHCV	10	Unmodified	_VLAAVLWHCV_					0	0	0		ENST00000583222.1_1_17:8819146-8819344:-|nuORF	ENST00000583222.1_1_17:8819146-8819344:-|nuORF	ENST00000583222.1_1_17:8819146-8819344:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.8113403320312	2	555.810062	1109.60557	0.29292	0.00016281	1.8814	0.0010457	2.1743	0.0012085	555.8110268838162	37.491	0.59629	37.805	37.495	38.091	0.31312					48	14	5	0	0	0	0.51323	1	3035	3035		54.765	3.4292	1	2386100			62093	14119	41395	41412	70403	70403					0.05515270221803803
VLAAVRLK	8	Unmodified	_VLAAVRLK_					0	0	0			REV__ENSG00000244165|ENST00000321826|P2RY11	REV__ENSG00000244165|ENST00000321826|P2RY11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.30047607421875	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.85787	1	6696	6696		9.4706	0	1	1852500	+		62094	23847	41396	41413	70404	70404					0.14627262273370434
VLAAVSPLV	9	Unmodified	_VLAAVSPLV_					0	0	0		ENSG00000185972|ENST00000335119|CCIN	ENSG00000185972|ENST00000335119|CCIN	ENSG00000185972|ENST00000335119|CCIN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7797546386719	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.76996	1	3248	3248		33.516	1.5607	1	2165200			62095	7764	41397	41414	70405	70405					0.10388447425282266
VLAAYGNV	8	Unmodified	_VLAAYGNV_					0	0	0		ENSG00000169992|ENST00000302926|NLGN2	ENSG00000169992|ENST00000302926|NLGN2	ENSG00000169992|ENST00000302926|NLGN2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2317199707031	2	403.723978	805.433404	-0.35113	-0.00014176	0.69665	0.00028125	0.34552	0.0001395	403.7240759081603	64.931	1.024	64.897	64.269	65.293	-0.03479					42	31	2	0	0	0	0.4196	1	6243	6243		14.664	0	1	101910			62096	6549	41398	41415	70406	70406					0.022904418059511045
VLADELLE	8	Unmodified	_VLADELLE_					0	0	0			REV__nc|ENSG00000143740|Q5SQN1-3|SNAP47	REV__nc|ENSG00000143740|Q5SQN1-3|SNAP47	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.24560546875	2	451.247483	900.480414	-0.14165	-6.3919E-05	2.9963	0.0013521	2.8546	0.0012881	451.24867992302364	67.749	1.1743	67.771	67.401	68.576	0.021599					102	53	2	0	0	0	0.86791	1	6370	6370		28.254	0	1	167670	+		62097	19835	41399	41416	70407	70407					0.02619256566435979
VLADLLEP	8	Unmodified	_VLADLLEP_					0	0	0		ENSG00000156697|ENST00000394422|UTP14A;nc|ENSG00000156697|Q9BVJ6-3|UTP14A	ENSG00000156697|ENST00000394422|UTP14A	ENSG00000156697|ENST00000394422|UTP14A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2517395019531	2	435.252569	868.490584	-0.16595	-7.2231E-05	-2.6833	-0.0011679	-2.8492	-0.0012401	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.88915	1	8269	8269		35.201	6.9464	1	2823900			62098	5389	41400	41417	70408	70408					0.0510786429166501
VLADPVRQ	8	Unmodified	_VLADPVRQ_					0	0	0			REV__nc|ENSG00000135114|Q15646-2|OASL	REV__nc|ENSG00000135114|Q15646-2|OASL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.2592468261719	2	449.261259	896.507966	-1.1655	-0.00052364	-0.32901	-0.00014781	-1.4946	-0.00067145	449.26086608568033	70.705	0.68031	70.776	70.454	71.134	0.071037					61	34	2	0	0	0	0.87064	1	6390	6390		29.15	4.6304	1	315510	+		62099	29862	41401	41418	70409	70409					0.05557204617332445
VLAEIVKP	8	Unmodified	_VLAEIVKP_					0	0	0		nc|ENSG00000158113|Q8N309-2|LRRC43;nc|ENSG00000158113|Q8N309-3|LRRC43;ENSG00000158113|ENST00000339777|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7800598144531	2	434.778754	867.542954	-0.97237	-0.00042277	4.234	0.0018408	3.2616	0.0014181	434.7805193577322	37.104	1.6925	37.05	36.066	37.758	-0.053555					155	37	5	0	0	0	0.86791	1	2609	2609		28.254	0	1	5510500			62100	5462	41402	41419	70410	70410					0.10388447425293634
VLAEIVKP	8	Unmodified	_VLAEIVKP_					0	0	0		nc|ENSG00000158113|Q8N309-2|LRRC43;nc|ENSG00000158113|Q8N309-3|LRRC43;ENSG00000158113|ENST00000339777|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.780029296875	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.88915	1	3280	3280		35.201	1.6851	1	1177900			62101	5462	41402	41419	70411	70411					0.10388447425293634
VLAEIVKP	8	Unmodified	_VLAEIVKP_					0	0	0		nc|ENSG00000158113|Q8N309-2|LRRC43;nc|ENSG00000158113|Q8N309-3|LRRC43;ENSG00000158113|ENST00000339777|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2809753417969	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.884	1	1916	1916		33.516	8.0654	1	2251100			62102	5462	41402	41419	70412	70412					0.10388447425293634
VLAEIVKP	8	Unmodified	_VLAEIVKP_					0	0	0		nc|ENSG00000158113|Q8N309-2|LRRC43;nc|ENSG00000158113|Q8N309-3|LRRC43;ENSG00000158113|ENST00000339777|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77996826171875	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.86288	2	3084	3084;3184		28.254	0	1	1327200			62103	5462	41402	41419	70413;70414	70413					0.10388447425293634
VLAEIVKP	8	Unmodified	_VLAEIVKP_					0	0	0		nc|ENSG00000158113|Q8N309-2|LRRC43;nc|ENSG00000158113|Q8N309-3|LRRC43;ENSG00000158113|ENST00000339777|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.91005	1	3645	3645		42.474	8.9589	1	1986600			62104	5462	41402	41419	70415	70415					0.10388447425293634
VLAEIVKP	8	Unmodified	_VLAEIVKP_					0	0	0		nc|ENSG00000158113|Q8N309-2|LRRC43;nc|ENSG00000158113|Q8N309-3|LRRC43;ENSG00000158113|ENST00000339777|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78033447265625	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.86288	1	2352	2352		26.796	1.3459	1	2486400			62105	5462	41402	41419	70416	70416					0.10388447425293634
VLAEIVKP	8	Unmodified	_VLAEIVKP_					0	0	0		nc|ENSG00000158113|Q8N309-2|LRRC43;nc|ENSG00000158113|Q8N309-3|LRRC43;ENSG00000158113|ENST00000339777|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7789001464844	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.477	1	66.522	66.022	67.022	0.045113								0	0	0	0.29353	1	5890	5890		28.254	0	1				62106	5462	41402	41419	70417	70417					0.10388447425293634
VLAEIVKP	8	Unmodified	_VLAEIVKP_					0	0	0		nc|ENSG00000158113|Q8N309-2|LRRC43;nc|ENSG00000158113|Q8N309-3|LRRC43;ENSG00000158113|ENST00000339777|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	nc|ENSG00000158113|Q8N309-2|LRRC43	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7748107910156	2	434.778754	867.542954	-1.4872	-0.00064659	2.9694	0.001291	1.4823	0.00064445	434.7799081673859	43.398	0.96524	44.172	43.498	44.463	0.7738					64	23	3	0	0	0	0.85277	1	3927	3927		25.45	0	1	2227600			62107	5462	41402	41419	70418	70418					0.10388447425293634
VLAELPII	8	Unmodified	_VLAELPII_					0	0	0		nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.2852783203125	2	434.281129	866.547705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.874	1	57.908	57.408	58.408	0.033905								0	0	0	0.29199	1	5285	5285		29.842	0	1				62108	8045	41403	41420	70419	70419					0.10909331568052494
VLAFFFFR	8	Unmodified	_VLAFFFFR_					0	0	0		ENST00000429772.6_1_12:48362369-48362630:+|nuORF	ENST00000429772.6_1_12:48362369-48362630:+|nuORF	ENST00000429772.6_1_12:48362369-48362630:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7937622070312	2	523.794738	1045.57492	0.20589	0.00010784	-1.7183	-0.00090006	-1.5124	-0.00079221	523.7937468382506	19.848	1.1814	19.218	18.937	20.118	-0.6296					65	25	3	0	0	0	0.884	1	620	620		33.516	1.5607	1	863270			62109	11616	41404	41421	70420	70420					0.05395859899090283
VLAGIVPIS	9	Unmodified	_VLAGIVPIS_					0	0	0		ENST00000356971.3_1_6:52925737-52926583:-|nuORF	ENST00000356971.3_1_6:52925737-52926583:-|nuORF	ENST00000356971.3_1_6:52925737-52926583:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7796325683594	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.76996	1	2979	2979		33.516	0	1	2766200			62110	10375	41405	41422	70421	70421					0.10388447425293634
VLAGLIEVV	9	Unmodified	_VLAGLIEVV_					0	0	0			REV__nc|ENSG00000158014|Q9BRI3-1|SLC30A2	REV__nc|ENSG00000158014|Q9BRI3-1|SLC30A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7898254394531	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.7932	1	3412	3412		17.365	0.89182	1	608260	+		62111	29958	41406	41423	70422	70422					0.10984716596749422
VLAGLIRK	8	Unmodified	_VLAGLIRK_					0	0	0		nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN;nc|ENSG00000176225|Q86VV8-4|RTTN;nc|ENSG00000176225|Q86VV8-2|RTTN;ENST00000581583.1_1_18:67834153-67872894:-|nuORF	nc|ENSG00000176225|Q86VV8-3|RTTN	nc|ENSG00000176225|Q86VV8-3|RTTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3002014160156	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.80963	1	7227	7227		15.636	0	1	1921500			62112	7065	41407	41424	70423	70423					0.14627262273359065
VLAGLLVEV	9	Unmodified	_VLAGLLVEV_					0	0	0			REV__nc|ENSG00000290691|A6NGW2|STRCP1	REV__nc|ENSG00000290691|A6NGW2|STRCP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7930603027344	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.7932	1	2339	2339		24.203	1.1603	1	1834900	+		62113	23835	41408	41425	70424	70424					0.10984716596749422
VLAGLLVLA	9	Unmodified	_VLAGLLVLA_					0	0	0		nc|ENSG00000135424|Q13683-9|ITGA7;ENSG00000135424|ENST00000257879|ITGA7;nc|ENSG00000135424|Q13683-10|ITGA7;nc|ENSG00000135424|Q13683|ITGA7;nc|ENSG00000135424|Q13683-3|ITGA7;nc|ENSG00000135424|Q13683-13|ITGA7;ENST00000557555.1_3_12:56079014-56082669:-|nuORF	nc|ENSG00000135424|Q13683-9|ITGA7	nc|ENSG00000135424|Q13683-9|ITGA7	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7801513671875	2	434.796946	867.57934	-1.9248	-0.00083688	-0.8737	-0.00037988	-2.7985	-0.0012168	434.7986309396253	37.021	0.52895	37.021	36.778	37.307	0					15	11	2	0	0	0	0.20789	1	2204	2204		21.702	0	1	34033			62114	4017	41409	41426	70425	70425					0.14025324321971766
VLAGPSVLL	9	Unmodified	_VLAGPSVLL_					0	0	0			REV__nc|ENSG00000164050|O43157-3|PLXNB1	REV__nc|ENSG00000164050|O43157-3|PLXNB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	2	434.778754	867.542954	-0.033173	-1.4423E-05	3.6612	0.0015918	3.628	0.0015774	434.78016112068724	33.457	1.6428	33.46	32.362	34.005	0.0030785					82	39	3	0	0	0	0.7932	1	1930	1930		19.36	0	1	229790	+		62115	21016	41410	41427	70426	70426					0.10388447425293634
VLAGPSVLL	9	Unmodified	_VLAGPSVLL_					0	0	0			REV__nc|ENSG00000164050|O43157-3|PLXNB1	REV__nc|ENSG00000164050|O43157-3|PLXNB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7792053222656	2	434.778754	867.542954	0.20501	8.9135E-05	2.1081	0.00091654	2.3131	0.0010057	434.77952396468385	43.343	2.099	43.316	42.291	44.39	-0.026768					151	50	4	0	0	0	0.7932	1	3380	3380		26.796	0	1	2133200	+		62116	21016	41410	41427	70427	70427					0.10388447425293634
VLAGPSVLL	9	Unmodified	_VLAGPSVLL_					0	0	0			REV__nc|ENSG00000164050|O43157-3|PLXNB1	REV__nc|ENSG00000164050|O43157-3|PLXNB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78009033203125	2	434.778754	867.542954	-0.47801	-0.00020783	4.1901	0.0018218	3.7121	0.0016139	434.78031491435894	33.573	1.1529	33.517	32.851	34.004	-0.056385					70	27	4	0	0	0	0.76996	1	2043	2043		33.516	0	1	421000	+		62117	21016	41410	41427	70428	70428					0.10388447425293634
VLAGPSVLL	9	Unmodified	_VLAGPSVLL_					0	0	0			REV__nc|ENSG00000164050|O43157-3|PLXNB1	REV__nc|ENSG00000164050|O43157-3|PLXNB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7800598144531	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.69914	1	2049	2049		40.573	0	1	3951300	+		62118	21016	41410	41427	70429	70429					0.10388447425293634
VLAGPSVLL	9	Unmodified	_VLAGPSVLL_					0	0	0			REV__nc|ENSG00000164050|O43157-3|PLXNB1	REV__nc|ENSG00000164050|O43157-3|PLXNB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.780029296875	2	434.778754	867.542954	0.76603	0.00033306	3.2628	0.0014186	4.0288	0.0017516	434.77972097925357	57.028	2.3704	57.061	56.581	58.952	0.033184					147	79	3	0	0	0	0.7932	1	5322	5322		20.482	0	1	337650	+		62119	21016	41410	41427	70430	70430					0.10388447425293634
VLAGPSVLL	9	Unmodified	_VLAGPSVLL_					0	0	0			REV__nc|ENSG00000164050|O43157-3|PLXNB1	REV__nc|ENSG00000164050|O43157-3|PLXNB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801818847656	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.69914	1	3236	3236		40.573	7.057	1	15771000	+		62120	21016	41410	41427	70431	70431					0.10388447425293634
VLAGPSVLL	9	Unmodified	_VLAGPSVLL_					0	0	0			REV__nc|ENSG00000164050|O43157-3|PLXNB1	REV__nc|ENSG00000164050|O43157-3|PLXNB1	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.9763	-0.00085926	5.3557	0.0023285	3.3794	0.0014693	434.78092802870907	33.539	0.82041	33.539	33.135	33.956	0	0.12975	0.0011594	NaN	33.516	58	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	218370	+		62121	21016	41410	41427							0.10388447425293634
VLAGPSVLL	9	Unmodified	_VLAGPSVLL_					0	0	0			REV__nc|ENSG00000164050|O43157-3|PLXNB1	REV__nc|ENSG00000164050|O43157-3|PLXNB1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.778754	867.542954	-1.6554	-0.00071974	5.1295	0.0022302	3.474	0.0015104	434.780852578441	33.328	0.86837	33.374	33.115	33.984	0.045849	-0.035224	0.00096263	NaN	33.516	88	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	416100	+		62122	21016	41410	41427							0.10388447425293634
VLAGSPSWL	9	Unmodified	_VLAGSPSWL_					0	0	0		ENST00000546155.5_1_19:41116274-41117985:+|nuORF	ENST00000546155.5_1_19:41116274-41117985:+|nuORF	ENST00000546155.5_1_19:41116274-41117985:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7906799316406	2	465.258185	928.501818	-0.59257	-0.0002757	-1.8418	-0.00085689	-2.4343	-0.0011326	465.25919305483455	34.678	0.59924	34.621	34.447	35.047	-0.056385					18	13	2	0	0	0	0.20789	1	2204	2204		40.573	13.777	1	25244			62123	13586	41411	41428	70432	70432					0.034706863857991266
VLAGVLLK	8	Unmodified	_VLAGVLLK_					0	0	0			REV__ENST00000465699.5_3_6:30620572-30620689:+|nuORF	REV__ENST00000465699.5_3_6:30620572-30620689:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.78497314453125	2	406.783839	811.553125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.943	1	33.053	32.553	33.553	0.10991								0	0	0	0.30884	1	1570	1570		13.775	0	1		+		62124	23504	41412	41429	70433	70433					0.1398105515052066
VLAGVLLK	8	Unmodified	_VLAGVLLK_					0	0	0			REV__ENST00000465699.5_3_6:30620572-30620689:+|nuORF	REV__ENST00000465699.5_3_6:30620572-30620689:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.78485107421875	2	406.783839	811.553125	0.022938	9.3307E-06	3.6731	0.0014942	3.696	0.0015035	406.7851827724374	33.215	0.93484	33.182	32.78	33.715	-0.032677					97	42	3	0	0	0	0.82464	1	1565	1565		21.702	0	1	368720	+		62125	23504	41412	41429	70434	70434					0.1398105515052066
VLAGVLLK	8	Unmodified	_VLAGVLLK_					0	0	0			REV__ENST00000465699.5_3_6:30620572-30620689:+|nuORF	REV__ENST00000465699.5_3_6:30620572-30620689:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.78515625	2	406.783839	811.553125	0.12711	5.1707E-05	3.399	0.0013826	3.5261	0.0014344	406.78513803821613	31.106	0.82648	31.109	30.404	31.23	0.0037212					29	18	2	0	0	0	0.86294	1	2077	2077		8.8223	0	1	2249400	+		62126	23504	41412	41429	70435	70435					0.1398105515052066
VLAIELLAA	9	Unmodified	_VLAIELLAA_					0	0	0		nc|ENSG00000084110|P42357-3|HAL;nc|ENSG00000084110|P42357-2|HAL;ENSG00000084110|ENST00000261208|HAL	nc|ENSG00000084110|P42357-3|HAL	nc|ENSG00000084110|P42357-3|HAL	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7930603027344	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.934	1	49.963	49.463	50.463	0.029629								0	0	0	0.33301	1	3893	3893		19.36	0	1				62127	1513	41413	41430	70436	70436					0.10984716596760791
VLAILGNVL	9	Unmodified	_VLAILGNVL_					0	0	0		ENSG00000128271|ENST00000337539|ADORA2A	ENSG00000128271|ENST00000337539|ADORA2A	ENSG00000128271|ENST00000337539|ADORA2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3009948730469	2	456.299853	910.585153	-1.7927	-0.00081802	3.97	0.0018115	2.1773	0.00099349	456.30151188064457	45.052	1.9056	45.052	44.154	46.06	0					117	46	3	0	0	0	0.69914	1	3347	3347		40.573	0	1	498210			62128	3534	41414	41431	70437	70437					0.1262842283365444
VLAILGNVL	9	Unmodified	_VLAILGNVL_					0	0	0		ENSG00000128271|ENST00000337539|ADORA2A	ENSG00000128271|ENST00000337539|ADORA2A	ENSG00000128271|ENST00000337539|ADORA2A	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.79296875	2	456.299853	910.585153	-1.873	-0.00085463	4.1802	0.0019074	2.3072	0.0010528	456.30164812728754	39.415	1.9331	39.415	38.686	40.619	0					126	49	4	0	0	0	0.20789	1	2419	2419		33.516	0	1	598590			62129	3534	41414	41431	70438	70438					0.1262842283365444
VLAINLGR	8	Unmodified	_VLAINLGR_					0	0	0			REV__nc|ENSG00000071889|P98173-3|FAM3A	REV__nc|ENSG00000071889|P98173-3|FAM3A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.2614440917969	2	428.27417	854.533787	1.2319	0.0005276	-1.0694	-0.00045799	0.16253	6.9608E-05	428.27398034827286	90.571	0.60243	91.022	90.74	91.342	0.45058					23	14	2	0	0	0	0.4196	1	10709	10709		24.203	0	1	256780	+		62130	16629	41415	41432	70439	70439					0.10070098859625887
VLAITVSY	8	Unmodified	_VLAITVSY_					0	0	0		ENSG00000148215|ENST00000373680|OR5C1	ENSG00000148215|ENST00000373680|OR5C1	ENSG00000148215|ENST00000373680|OR5C1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.25653076171875	2	433.255111	864.49567	1.9986	0.0008659	-2.4692	-0.0010698	-0.47061	-0.0002039	433.25386183757	112.22	0.92635	112.25	111.94	112.87	0.030602					62	35	2	0	0	0	0.86791	1	13577	13577		28.254	0	1	560910			62131	4939	41416	41433	70440	70440					0.05800168154280527
VLAIVKRA	8	Unmodified	_VLAIVKRA_					0	0	0			REV__ENSG00000168143|ENST00000306858|FAM83B	REV__ENSG00000168143|ENST00000306858|FAM83B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.30023193359375	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.80963	1	6438	6438		15.636	0.97212	1	1072400	+		62132	21466	41417	41434	70441	70441					0.14627262273359065
VLAIVKRA	8	Unmodified	_VLAIVKRA_					0	0	0			REV__ENSG00000168143|ENST00000306858|FAM83B	REV__ENSG00000168143|ENST00000306858|FAM83B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3001708984375	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.85787	1	8161	8161		9.4706	0	1	6323600	+		62133	21466	41417	41434	70442	70442					0.14627262273359065
VLAKALRV	8	Unmodified	_VLAKALRV_					0	0	0			REV__nc|ENSG00000146576|Q96N11-2|INTS15	REV__nc|ENSG00000146576|Q96N11-2|INTS15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2999572753906	2	435.300188	868.585822	-0.33292	-0.00014492	0.65367	0.00028454	0.32075	0.00013962	435.30030600334584	75.563	1.7203	75.517	74.991	76.711	-0.045975					102	48	3	0	0	0	0.85787	1	7498	7498		9.4706	0	1	492420	+		62134	20024	41418	41435	70443	70443					0.14627262273359065
VLAKALRV	8	Unmodified	_VLAKALRV_					0	0	0			REV__nc|ENSG00000146576|Q96N11-2|INTS15	REV__nc|ENSG00000146576|Q96N11-2|INTS15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3004150390625	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.86294	1	7827	7827		8.8223	0	1	6323600	+		62135	20024	41418	41435	70444	70444					0.14627262273359065
VLAKKGTS	8	Unmodified	_VLAKKGTS_					0	0	0		nc|ENSG00000065534|Q15746-4|MYLK;nc|ENSG00000065534|Q15746-5|MYLK;nc|ENSG00000065534|Q15746-2|MYLK;nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-6|MYLK;ENSG00000065534|ENST00000360304|MYLK;ENST00000504946.5_1_3:123400948-123419770:-|nuORF;nc|ENSG00000065534|Q15746-11|MYLK;nc|ENSG00000065534|Q15746-7|MYLK	nc|ENSG00000065534|Q15746-4|MYLK	nc|ENSG00000065534|Q15746-4|MYLK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	402.2516174316406	2	402.252903	802.491253	0.45649	0.00018362	-1.3622	-0.00054793	-0.90567	-0.00036431	402.252226877745	19.833	0.27389	19.811	19.673	19.947	-0.021709					22	13	2	0	0	0	0.82419	1	443	443		13.775	0.81615	1	74083			62136	1133	41419	41436	70445	70445					0.08210703731378999
VLAKRVPIR	9	Unmodified	_VLAKRVPIR_					0	0	0			REV__nc|ENSG00000023228|P28331-5|NDUFS1	REV__nc|ENSG00000023228|P28331-5|NDUFS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.36181640625	2	526.358568	1050.70258	0.76968	0.00040513	3.9857	0.0020979	4.7554	0.002503	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.77546	1	2272	2272		31.955	1.4512	1	7968500	+		62137	16247	41420	41437	70446	70446					0.1792600049311659
VLAKRVPIR	9	Unmodified	_VLAKRVPIR_					0	0	0			REV__nc|ENSG00000023228|P28331-5|NDUFS1	REV__nc|ENSG00000023228|P28331-5|NDUFS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3614501953125	2	526.358568	1050.70258	1.1443	0.00060234	4.0086	0.00211	5.153	0.0027123	526.3605227402171	34.131	1.7657	34.341	33.942	35.708	0.21003					136	43	4	0	0	0	0.77546	1	2597	2597		31.955	12.595	1	7568500	+		62138	16247	41420	41437	70447	70447					0.1792600049311659
VLAKRVPIR	9	Unmodified	_VLAKRVPIR_					0	0	0			REV__nc|ENSG00000023228|P28331-5|NDUFS1	REV__nc|ENSG00000023228|P28331-5|NDUFS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3615112304688	2	526.358568	1050.70258	1.0713	0.00056389	3.7812	0.0019903	4.8525	0.0025542	526.360423923534	32.788	1.6436	32.999	32.422	34.066	0.21168					152	38	5	0	0	0	0.77546	2	2335	2311;2335		31.955	4.0726	1	7743700	+		62139	16247	41420	41437	70448;70449	70449					0.1792600049311659
VLAKRVPIR	9	Unmodified	_VLAKRVPIR_					0	0	0			REV__nc|ENSG00000023228|P28331-5|NDUFS1	REV__nc|ENSG00000023228|P28331-5|NDUFS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3615112304688	2	526.358568	1050.70258	1.3753	0.00072391	3.8587	0.002031	5.234	0.0027549	526.3604424502926	34.187	1.5135	34.492	34.159	35.672	0.30494					130	37	5	0	0	0	0.74721	1	2570	2570		37.159	5.2042	1	5570700	+		62140	16247	41420	41437	70450	70450					0.1792600049311659
VLAKRVPIR	9	Unmodified	_VLAKRVPIR_					0	0	0			REV__nc|ENSG00000023228|P28331-5|NDUFS1	REV__nc|ENSG00000023228|P28331-5|NDUFS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3607788085938	2	526.358568	1050.70258	1.6664	0.00087713	3.3741	0.001776	5.0405	0.0026531	526.3602142312507	35.988	1.9361	36.429	35.808	37.744	0.44043					142	47	4	0	0	0	0.78058	2	2846	2846;2860		30.504	1.3541	1	6841400	+		62141	16247	41420	41437	70451;70452	70451					0.1792600049311659
VLAKVRAL	8	Unmodified	_VLAKVRAL_					0	0	0		ENSG00000123999|ENST00000243786|INHA	ENSG00000123999|ENST00000243786|INHA	ENSG00000123999|ENST00000243786|INHA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3002014160156	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81724	2	7285	6927;7285		14.664	0	1	1921500			62142	3297	41421	41438	70453;70454	70454					0.14627262273359065
VLAKVRAL	8	Unmodified	_VLAKVRAL_					0	0	0		ENSG00000123999|ENST00000243786|INHA	ENSG00000123999|ENST00000243786|INHA	ENSG00000123999|ENST00000243786|INHA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3001708984375	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.82464	1	6728	6728		21.702	0	1	1819800			62143	3297	41421	41438	70455	70455					0.14627262273359065
VLAKVRAL	8	Unmodified	_VLAKVRAL_					0	0	0		ENSG00000123999|ENST00000243786|INHA	ENSG00000123999|ENST00000243786|INHA	ENSG00000123999|ENST00000243786|INHA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2993469238281	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81548	1	8561	8561		20.482	0	1	6323600			62144	3297	41421	41438	70456	70456					0.14627262273359065
VLALCTAD	8	Unmodified	_VLALCTAD_					0	0	0		nc|ENSG00000261130|Q2QL34-2|MPV17L	nc|ENSG00000261130|Q2QL34-2|MPV17L	nc|ENSG00000261130|Q2QL34-2|MPV17L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2088623046875	2	403.209847	804.40514	-1.8542	-0.00074762	-0.040711	-1.6415E-05	-1.8949	-0.00076404	403.2097445210388	85.667	2.0538	85.825	85.416	87.47	0.15851					103	47	4	0	0	0	0.86288	1	8368	8368		26.796	1.3459	1	1256500			62145	15303	41422	41439	70457	70457					-0.004886241656549828
VLALEIAAL	9	Unmodified	_VLALEIAAL_					0	0	0			REV__ENSG00000023839|ENST00000647814|ABCC2	REV__ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79022216796875	2	456.791861	911.569169	0.18235	8.3295E-05	0.58937	0.00026922	0.77171	0.00035251	456.79200220887	40.258	1.2138	40.227	39.65	40.864	-0.030987					94	32	4	0	0	0	0.77546	1	2890	2890		31.955	0	1	1159000	+		62146	16253	41423	41440	70458	70458					0.10984716596760791
VLALEPKV	8	Unmodified	_VLALEPKV_					0	0	0			REV__ENSG00000146918|ENST00000356309|NCAPG2	REV__ENSG00000146918|ENST00000356309|NCAPG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.780517578125	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.81548	1	3529	3529		20.482	1.1219	1	2750200	+		62147	20042	41424	41441	70459	70459					0.10388447425293634
VLALFLAKTL	10	Unmodified	_VLALFLAKTL_					0	0	0			REV__nc|ENSG00000166377|O43861-2|ATP9B	REV__nc|ENSG00000166377|O43861-2|ATP9B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.72509765625	2	544.857535	1087.70052	0.47727	0.00026005	-3.4217	-0.0018644	-2.9445	-0.0016043	544.8553808463047	24.72	0.43724	24.674	24.361	24.798	-0.04598					15	9	2	0	0	0	0.37624	1	958	958		13.454	0	1	18604	+		62148	21286	41425	41442	70460	70460					0.16017526964651552
VLALIGVAGV	10	Unmodified	_VLALIGVAGV_					0	0	0			REV__ENSG00000259224|ENST00000412468|SLC35G6	REV__ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30035400390625	2	456.299853	910.585153	0.17352	7.9178E-05	1.8885	0.00086173	2.062	0.00094091	456.30054777495894	45.254	1.9566	45.236	44.141	46.098	-0.018585					90	45	3	0	0	0	0.86786	1	3535	3535		26.796	0	1	417410	+		62149	21108	41426	41443	70461	70461					0.1262842283366581
VLALIGVAGV	10	Unmodified	_VLALIGVAGV_					0	0	0			REV__ENSG00000259224|ENST00000412468|SLC35G6	REV__ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30078125	2	456.299853	910.585153	-0.95599	-0.00043622	2.965	0.0013529	2.009	0.00091669	456.30107129124815	45.178	1.6921	45.147	44.106	45.798	-0.031067					86	38	3	0	0	0	0.85976	1	3649	3649		35.201	0	1	476180	+		62150	21108	41426	41443	70462	70462					0.1262842283366581
VLALIGVAGV	10	Unmodified	_VLALIGVAGV_					0	0	0			REV__ENSG00000259224|ENST00000412468|SLC35G6	REV__ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30096435546875	2	456.299853	910.585153	-1.2554	-0.00057285	3.8227	0.0017443	2.5673	0.0011715	456.30134105223925	39.578	1.7678	39.585	38.842	40.609	0.0065002					91	49	3	0	0	0	0.86786	1	2432	2432		26.796	1.3459	1	547140	+		62151	21108	41426	41443	70463	70463					0.1262842283366581
VLALIGVAGV	10	Unmodified	_VLALIGVAGV_					0	0	0			REV__ENSG00000259224|ENST00000412468|SLC35G6	REV__ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3013610839844	2	456.299853	910.585153	0.23964	0.00010935	1.5979	0.00072912	1.8375	0.00083847	456.3004567864084	43.097	2.576	43.154	41.691	44.267	0.056747					113	66	3	0	0	0	0.86786	1	2962	2962		26.796	0	1	821670	+		62152	21108	41426	41443	70464	70464					0.1262842283366581
VLALIGVAGV	10	Unmodified	_VLALIGVAGV_					0	0	0			REV__ENSG00000259224|ENST00000412468|SLC35G6	REV__ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3008117675781	2	456.299853	910.585153	0.2873	0.0001311	2.3096	0.0010538	2.5969	0.0011849	456.30080462463604	48.151	1.3839	48.189	47.742	49.126	0.037735					72	38	3	0	0	0	0.85108	1	3653	3653		19.36	0	1	274320	+		62153	21108	41426	41443	70465	70465					0.1262842283366581
VLALIGVAGV	10	Unmodified	_VLALIGVAGV_					0	0	0			REV__ENSG00000259224|ENST00000412468|SLC35G6	REV__ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.30023193359375	2	456.299853	910.585153	0.29858	0.00013624	2.5342	0.0011564	2.8328	0.0012926	456.3008516617644	49.246	1.4512	49.283	48.879	50.33	0.037731					70	34	3	0	0	0	0.86786	1	3835	3835		26.796	0	1	154250	+		62154	21108	41426	41443	70466	70466					0.1262842283366581
VLALIVTLLP	10	Unmodified	_VLALIVTLLP_					0	0	0			REV__nc|ENSG00000182087|Q4ZIN3-2|TMEM259	REV__nc|ENSG00000182087|Q4ZIN3-2|TMEM259	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3599853515625	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.85939	1	2316	2316		23.042	6.5693	1	781950	+		62155	22498	41427	41444	70467	70467					0.18194411107424457
VLALKRAV	8	Unmodified	_VLALKRAV_					0	0	0			REV__ENST00000492136.1_1_3:33434749-33437792:-|nuORF	REV__ENST00000492136.1_1_3:33434749-33437792:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3003845214844	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.81724	2	7342	7033;7342		14.664	0	1	1921500	+		62156	20352	41428	41445	70468;70469	70469					0.14627262273359065
VLALKRAV	8	Unmodified	_VLALKRAV_					0	0	0			REV__ENST00000492136.1_1_3:33434749-33437792:-|nuORF	REV__ENST00000492136.1_1_3:33434749-33437792:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3002014160156	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.81724	2	8125	8125;8483		23.037	0	1	6323600	+		62157	20352	41428	41445	70470;70471	70470					0.14627262273359065
VLALLDKP	8	Unmodified	_VLALLDKP_					0	0	0		ENST00000284384.6_1_17:64637544-64770230:+|nuORF;ENSG00000154229|ENST00000413366|PRKCA	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7769775390625	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.86791	1	2291	2291		28.254	1.4582	1	3714500			62158	5263	41429	41446	70472	70472					0.10388447425282266
VLALLDKP	8	Unmodified	_VLALLDKP_					0	0	0		ENST00000284384.6_1_17:64637544-64770230:+|nuORF;ENSG00000154229|ENST00000413366|PRKCA	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7791442871094	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.81548	1	2268	2268		20.482	0	1	3951300			62159	5263	41429	41446	70473	70473					0.10388447425282266
VLALLDKP	8	Unmodified	_VLALLDKP_					0	0	0		ENST00000284384.6_1_17:64637544-64770230:+|nuORF;ENSG00000154229|ENST00000413366|PRKCA	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	ENST00000284384.6_1_17:64637544-64770230:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7802429199219	2	434.778754	867.542954	0.17139	7.4517E-05	3.201	0.0013917	3.3724	0.0014663	434.7800235008866	37.854	1.477	37.948	37.639	39.116	0.094318					162	48	4	0	0	0	0.89457	1	2347	2347		37.028	0	1	2203700			62160	5263	41429	41446	70474	70474					0.10388447425282266
VLALLSAKP	9	Unmodified	_VLALLSAKP_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3009033203125	2	456.299853	910.585153	-0.32797	-0.00014965	3.2781	0.0014958	2.9502	0.0013462	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.7932	1	1939	1939		25.45	0.94616	1	1220600	+		62161	22874	41430	41447	70475	70475					0.1262842283365444
VLALLSAKP	9	Unmodified	_VLALLSAKP_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3006591796875	2	456.299853	910.585153	0.25824	0.00011784	2.0816	0.00094982	2.3398	0.0010677	456.3006554004226	45.028	1.9814	45.077	44.089	46.07	0.048996					97	49	3	0	0	0	0.78983	1	3221	3221		27.882	1.0861	1	456360	+		62162	22874	41430	41447	70476	70476					0.1262842283365444
VLALLSAKP	9	Unmodified	_VLALLSAKP_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3011474609375	2	456.299853	910.585153	0.12298	5.6116E-05	2.7993	0.0012773	2.9223	0.0013334	456.30098509136985	34.994	1.698	34.939	34.615	36.313	-0.055149					136	59	3	0	0	0	0.78983	1	1787	1787		27.882	1.0861	1	657240	+		62163	22874	41430	41447	70477	70477					0.1262842283365444
VLALLSAKP	9	Unmodified	_VLALLSAKP_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3012390136719	2	456.299853	910.585153	-0.16313	-7.4434E-05	2.0671	0.00094322	1.904	0.00086878	456.30063437425633	43.131	1.7393	43.081	42.268	44.008	-0.050308					99	45	4	0	0	0	0.7932	1	2961	2961		23.042	2.5607	1	855890	+		62164	22874	41430	41447	70478	70478					0.1262842283365444
VLALLSAKP	9	Unmodified	_VLALLSAKP_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.3011474609375	2	456.299853	910.585153	-0.40408	-0.00018438	3.3963	0.0015497	2.9922	0.0013653	456.3012719086531	32.915	1.5209	33.085	32.546	34.067	0.16971					108	35	4	0	0	0	0.67345	1	2311	2311		42.396	8.8806	1	2612400	+		62165	22874	41430	41447	70479	70479					0.1262842283365444
VLALLSAKP	9	Unmodified	_VLALLSAKP_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30126953125	2	456.299853	910.585153	0.82269	0.00037539	2.1236	0.000969	2.9463	0.0013444	456.30067401982916	32.79	1.601	33.001	32.465	34.066	0.21168					118	37	4	0	0	0	0.62081	1	2336	2336		45.952	8.7928	1	2892400	+		62166	22874	41430	41447	70480	70480					0.1262842283365444
VLALLSLSG	9	Unmodified	_VLALLSLSG_					0	0	0		ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF	ENSG00000166710|ENST00000648006|B2M	ENSG00000166710|ENST00000648006|B2M	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7738952636719	2	436.776211	871.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.116	1	27.116	26.616	27.616	0								0	0	0	0.31472	1	1066	1066		25.45	1.2474	1				62167	6222	41431	41448	70481	70481					0.09696143562678117
VLALLSSPL	9	Unmodified	_VLALLSSPL_					0	0	0		ENST00000407472.5_1_22:19839644-19839932:-|nuORF	ENST00000407472.5_1_22:19839644-19839932:-|nuORF	ENST00000407472.5_1_22:19839644-19839932:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7903137207031	2	456.791861	911.569169	-1.2425	-0.00056755	3.5848	0.0016375	2.3423	0.0010699	456.793339140095	42.482	3.4813	42.487	41.948	45.43	0.0043983					186	89	3	0	0	0	0.7932	1	3018	3018		26.796	0	1	548640			62168	11288	41432	41449	70482	70482					0.10984716596760791
VLALLTISVM	10	Oxidation (M)	_VLALLTISVM(Oxidation (M))_		VLALLTISVM(1)		VLALLTISVM(44)	0	0	1			REV__ENST00000475789.1_1_7:89789075-89791404:+|nuORF	REV__ENST00000475789.1_1_7:89789075-89791404:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3271484375	2	538.325211	1074.63587	3.4335	0.0018483	-0.31662	-0.00017044	3.1169	0.0016779	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.71042	1	11158	11158		44.117	6.9577	1	75550000	+		62169	21100	41433	41450	70483	70483		315			0.10153584096360646
VLALLTISVM	10	Oxidation (M)	_VLALLTISVM(Oxidation (M))_		VLALLTISVM(1)		VLALLTISVM(46)	0	0	1			REV__ENST00000475789.1_1_7:89789075-89791404:+|nuORF	REV__ENST00000475789.1_1_7:89789075-89791404:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3267211914062	2	538.325211	1074.63587	0.84014	0.00045227	2.1852	0.0011764	3.0254	0.0016286	538.326371026974	100.85	3.8483	100.99	100.33	104.18	0.14352					341	94	6	0	0	0	0.67608	1	10584	10584		45.952	7.1458	1	92159000	+		62170	21100	41433	41450	70484	70484		315			0.10153584096360646
VLALLVLGE	9	Unmodified	_VLALLVLGE_					0	0	0		ENST00000508571.6_1_5:109668587-109961153:-|nuORF;ENST00000515518.6_1_5:109760554-109978041:-|nuORF;nc|ENSG00000186952|C9JQI7-2|TMEM232;ENSG00000186952|ENST00000455884|TMEM232;ENST00000512003.7_1_5:109760554-109954135:-|nuORF	ENST00000508571.6_1_5:109668587-109961153:-|nuORF	ENST00000508571.6_1_5:109668587-109961153:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8006286621094	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	1	3643	3643		20.482	0	1	1294000			62171	7831	41434	41451	70485	70485					0.11905003113804469
VLALLVLPLE	10	Unmodified	_VLALLVLPLE_					0	0	0			REV__nc|ENSG00000165623|P07492-2|GRP	REV__nc|ENSG00000165623|P07492-2|GRP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.3591918945312	2	540.357368	1078.70018	0.26404	0.00014267	2.2426	0.0012118	2.5067	0.0013545	540.3583702946399	36.686	1.1714	36.789	36.281	37.453	0.10306					78	34	3	0	0	0	0.84874	1	2058	2058		18.324	0.95945	1	384450	+		62172	15675	41435	41452	70486	70486					0.16398107244799576
VLALMAHSLAT	11	Unmodified	_VLALMAHSLAT_					0	0	0		ENSG00000188822|ENST00000374472|CNR2	ENSG00000188822|ENST00000374472|CNR2	ENSG00000188822|ENST00000374472|CNR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.3216552734375	2	563.818084	1125.62162	-0.37723	-0.00021269	-1.98	-0.0011164	-2.3573	-0.0013291	563.8171367706988	53.744	1.0641	53.72	53.305	54.369	-0.02475					38	26	2	0	0	0	0.72918	1	4813	4813		26.693	2.4902	1	113200			62173	7964	41436	41453	70487	70487					0.0638293166805397
VLALPDIK	8	Unmodified	_VLALPDIK_					0	0	0			REV__nc|ENSG00000153827|Q14669-4|TRIP12	REV__nc|ENSG00000153827|Q14669-4|TRIP12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801208496094	2	434.778754	867.542954	-0.14051	-6.1091E-05	3.4383	0.0014949	3.2978	0.0014338	434.7801225093181	38.257	1.3722	38.268	37.812	39.184	0.011173					116	31	4	0	0	0	0.86791	1	2557	2557		28.254	1.4582	1	2138600	+		62174	20360	41437	41454	70488	70488					0.10388447425282266
VLALPNGQLVL	11	Unmodified	_VLALPNGQLVL_					0	0	0			REV__nc|ENSG00000158113|Q8N309-2|LRRC43	REV__nc|ENSG00000158113|Q8N309-2|LRRC43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.8533935546875	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.63176	1	10473	10473		40.778	7.9657	1	34546000	+		62175	20588	41438	41455	70489	70489					0.1340743747093711
VLALPNGQLVL	11	Unmodified	_VLALPNGQLVL_					0	0	0			REV__nc|ENSG00000158113|Q8N309-2|LRRC43	REV__nc|ENSG00000158113|Q8N309-2|LRRC43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8533325195312	2	568.855524	1135.69649	-1.1637	-0.000662	-2.9788	-0.0016945	-4.1425	-0.0023565	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.68378	2	10987	10987;11023		34.173	2.6427	1	50786000	+		62176	20588	41438	41455	70490;70491	70490					0.1340743747093711
VLALPPITRL	10	Unmodified	_VLALPPITRL_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8399658203125	2	546.860609	1091.70667	3.3743	0.0018453	-0.054682	-2.9903E-05	3.3196	0.0018153	547.3609223618713	101.07	0.60817	101.02	100.79	101.4	-0.052116					23	14	2	0	0	0	0.37624	1	10966	10966		51.335	17.163	1	356250	+		62177	27800	41439	41456	70492	70492					0.16448045196170824
VLALPPITRL	10	Unmodified	_VLALPPITRL_					0	0	0			REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	REV__ENST00000499869.6_1_4:10076014-10076101:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8406982421875	2	546.860609	1091.70667	0.84672	0.00046304	-0.7201	-0.0003938	0.12661	6.924E-05	546.8599558613179	100.61	0.21848	100.75	100.6	100.81	0.14352					7	4	2	0	0	0	0.37624	1	10498	10498		34.173	11.13	1	69381	+		62178	27800	41439	41456	70493	70493					0.16448045196170824
VLALPPPLP	9	Unmodified	_VLALPPPLP_					0	0	0		ENSG00000069020|ENST00000403625|MAST4;nc|ENSG00000069020|O15021-4|MAST4	ENSG00000069020|ENST00000403625|MAST4	ENSG00000069020|ENST00000403625|MAST4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	458.7873229980469	2	458.796946	915.57934	1.7261	0.00079195	3.5633	0.0016348	5.2895	0.0024268	458.79859329788155	93.189	0.81884	93.128	92.72	93.539	-0.06144					25	19	2	0	0	0	0.20789	1	9845	9845		29.842	0	1	117030			62179	1212	41440	41457	70494	70494					0.11817324321987144
VLALPSVAL	9	Unmodified	_VLALPSVAL_					0	0	0		ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7876281738281	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.67235	1	2802	2802		42.474	0	1	11085000			62180	5399	41441	41458	70495	70495					0.11308733942325944
VLALPSVAL	9	Unmodified	_VLALPSVAL_					0	0	0		ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7879333496094	2	441.786579	881.558604	0.24859	0.00010982	2.2103	0.00097647	2.4589	0.0010863	441.78740488409534	41.835	2.8271	41.804	40.73	43.557	-0.030991					229	71	5	0	0	0	0.78851	1	3013	3013		28.254	0	1	12471000			62181	5399	41441	41458	70496	70496					0.11308733942325944
VLALPSVAL	9	Unmodified	_VLALPSVAL_					0	0	0		ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7877197265625	2	441.786579	881.558604	0.00032149	1.4203E-07	2.3662	0.0010454	2.3665	0.0010455	441.7874715667024	41.772	2.9852	41.775	40.834	43.819	0.003418					226	73	5	0	0	0	0.49378	1	3150	3150		52.299	0	1	12523000			62182	5399	41441	41458	70497	70497					0.11308733942325944
VLALPSVAL	9	Unmodified	_VLALPSVAL_					0	0	0		ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7874755859375	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.7932	1	2869	2869		26.796	1.3459	1	9571700			62183	5399	41441	41458	70498	70498					0.11308733942325944
VLALPSVAL	9	Unmodified	_VLALPSVAL_					0	0	0		ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7879943847656	2	441.786579	881.558604	-0.54459	-0.00024059	3.5319	0.0015603	2.9873	0.0013197	441.7881167581505	37.981	2.8453	38.294	37.083	39.929	0.31312					193	69	5	0	0	0	0.7932	3	3221	3127;3139;3221		26.796	0	1	61531000			62184	5399	41441	41458	70499;70500;70501	70501					0.11308733942325944
VLALPSVAL	9	Unmodified	_VLALPSVAL_					0	0	0		ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7880859375	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.7932	1	3255	3255		19.36	0	1	4170800			62185	5399	41441	41458	70502	70502					0.11308733942325944
VLALPSVAL	9	Unmodified	_VLALPSVAL_					0	0	0		ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	ENSG00000156885|ENST00000287490|COX6A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78631591796875	2	441.786579	881.558604	-2.6056	-0.0011511	3.8386	0.0016959	1.233	0.00054472	441.7881605091801	40.922	2.2099	41.314	40.796	43.006	0.39209					179	59	5	0	0	0	0.76996	1	3511	3511		33.516	0	1	185320000			62186	5399	41441	41458	70503	70503					0.11308733942325944
VLALPSWTLRL	11	Unmodified	_VLALPSWTLRL_					0	0	0		ENST00000549920.5_2_19:49122492-49122792:-|nuORF	ENST00000549920.5_2_19:49122492-49122792:-|nuORF	ENST00000549920.5_2_19:49122492-49122792:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8933715820312	2	634.889898	1267.76524	0.93451	0.00059331	2.8473	0.0018077	3.7818	0.002401	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.64498	1	11334	11334		39.253	0	1	69492000			62187	13647	41442	41459	70504	70504					0.14207101770648478
VLALRCLQP	9	Unmodified	_VLALRCLQP_					0	0	0		ENST00000582233.1_1_18:29671870-29672068:-|nuORF	ENST00000582233.1_1_18:29671870-29672068:-|nuORF	ENST00000582233.1_1_18:29671870-29672068:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.8013000488281	2	506.802237	1011.58992	-1.5095	-0.000765	-0.90363	-0.00045796	-2.4131	-0.001223	506.8017338500082	46.598	2.104	46.598	45.336	47.44	0					97	57	2	0	0	0	0.7932	1	3432	3432		23.042	2.0956	1	294110			62188	14111	41443	41460	70505	70505					0.08458983704770162
VLALRCLQP	9	Unmodified	_VLALRCLQP_					0	0	0		ENST00000582233.1_1_18:29671870-29672068:-|nuORF	ENST00000582233.1_1_18:29671870-29672068:-|nuORF	ENST00000582233.1_1_18:29671870-29672068:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8013610839844	2	506.802237	1011.58992	-0.65007	-0.00032946	-1.713	-0.00086818	-2.3631	-0.0011976	506.8012923744614	46.783	1.6998	46.754	45.886	47.586	-0.028782					74	44	2	0	0	0	0.69914	1	3841	3841		40.573	7.7602	1	223510			62189	14111	41443	41460	70506	70506					0.08458983704770162
VLALRCLQP	9	Unmodified	_VLALRCLQP_					0	0	0		ENST00000582233.1_1_18:29671870-29672068:-|nuORF	ENST00000582233.1_1_18:29671870-29672068:-|nuORF	ENST00000582233.1_1_18:29671870-29672068:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.80133056640625	2	506.802237	1011.58992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.456	1	50.506	50.006	51.006	0.049896								0	0	0	0.31088	1	3968	3968		26.796	1.3459	1				62190	14111	41443	41460	70507	70507					0.08458983704770162
VLALRFNLHRA	11	Unmodified	_VLALRFNLHRA_					0	0	0		ENST00000378720.7_1_13:47356913-47361232:-|nuORF	ENST00000378720.7_1_13:47356913-47361232:-|nuORF	ENST00000378720.7_1_13:47356913-47361232:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2664489746094	3	437.266568	1308.77787	1.089	0.00047619	1.6885	0.00073832	2.7775	0.0012145	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.76579	1	4874	4874		18.531	0.69791	1	2745300			62191	10872	41444	41461	70508	70508					0.13583557953529635
VLALRFNLHRA	11	Unmodified	_VLALRFNLHRA_					0	0	0		ENST00000378720.7_1_13:47356913-47361232:-|nuORF	ENST00000378720.7_1_13:47356913-47361232:-|nuORF	ENST00000378720.7_1_13:47356913-47361232:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.26806640625	3	437.266568	1308.77787	0.28665	0.00012534	2.7276	0.0011927	3.0143	0.001318	437.2676689275105	50.631	1.3868	50.681	50.015	51.402	0.049896					192	41	5	0	0	0	0.76892	1	4009	4009		17.833	2.5	1	2963500			62192	10872	41444	41461	70509	70509					0.13583557953529635
VLALRFNLHRA	11	Unmodified	_VLALRFNLHRA_					0	0	0		ENST00000378720.7_1_13:47356913-47361232:-|nuORF	ENST00000378720.7_1_13:47356913-47361232:-|nuORF	ENST00000378720.7_1_13:47356913-47361232:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.267578125	3	437.266568	1308.77787	0.31383	0.00013723	2.5449	0.0011128	2.8587	0.00125	437.2675828694414	53.695	1.8561	53.777	53.032	54.888	0.081528					177	50	5	0	0	0	0.74022	1	4323	4323		24.232	1.6702	1	2521600			62193	10872	41444	41461	70510	70510					0.13583557953529635
VLALRFNLHRA	11	Unmodified	_VLALRFNLHRA_					0	0	0		ENST00000378720.7_1_13:47356913-47361232:-|nuORF	ENST00000378720.7_1_13:47356913-47361232:-|nuORF	ENST00000378720.7_1_13:47356913-47361232:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26751708984375	3	437.266568	1308.77787	-0.53562	-0.00023421	3.585	0.0015676	3.0494	0.0013334	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.67041	1	4277	4277		36.318	9.2703	1	4132000			62194	10872	41444	41461	70511	70511					0.13583557953529635
VLALRKIG	8	Unmodified	_VLALRKIG_					0	0	0			REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3001708984375	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.80127	1	6849	6849		16.705	0	1	1680500	+		62195	28526	41445	41462	70512	70512					0.14627262273370434
VLALRKIG	8	Unmodified	_VLALRKIG_					0	0	0			REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3006591796875	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.80963	2	7377	7314;7377		23.037	0	1	881780	+		62196	28526	41445	41462	70513;70514	70514					0.14627262273370434
VLALRKIG	8	Unmodified	_VLALRKIG_					0	0	0			REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.30035400390625	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.85228	1	6564	6564		10.185	0	1	2081500	+		62197	28526	41445	41462	70515	70515					0.14627262273370434
VLALRKIG	8	Unmodified	_VLALRKIG_					0	0	0			REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.3001708984375	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.80963	1	6510	6510		15.636	0.97212	1	1819800	+		62198	28526	41445	41462	70516	70516					0.14627262273370434
VLALRKIG	8	Unmodified	_VLALRKIG_					0	0	0			REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3001708984375	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.85787	1	6613	6613		9.4706	0	1	1852500	+		62199	28526	41445	41462	70517	70517					0.14627262273370434
VLALRKIG	8	Unmodified	_VLALRKIG_					0	0	0			REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2990417480469	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82419	1	8621	8621		13.775	0	1	5485100	+		62200	28526	41445	41462	70518	70518					0.14627262273370434
VLALRKIGRSP	11	Unmodified	_VLALRKIGRSP_					0	0	0			REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	REV__ENST00000545653.5_1_5:39373349-39375117:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.9300537109375	3	403.931185	1208.77173	0.032409	1.3091E-05	-3.8086	-0.0015384	-3.7762	-0.0015253	403.92958453308154	47.204	3.9569	47.195	46.691	50.647	-0.0093269					201	102	2	0	0	0	0.76699	1	3873	3873		11.932	1.3456	1	2636600	+		62201	28526	41446	41463	70519	70519					0.1756903972204782
VLALRPGR	8	Unmodified	_VLALRPGR_					0	0	0		ENST00000540866.2_1_12:123459879-123461705:+|nuORF;ENST00000420319.6_1_12:123459798-123461705:+|nuORF;ENST00000538628.5_1_12:123459581-123461705:+|nuORF	ENST00000540866.2_1_12:123459879-123461705:+|nuORF	ENST00000540866.2_1_12:123459879-123461705:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.26873779296875	2	441.287611	880.56067	0.38265	0.00016886	0.46036	0.00020315	0.84301	0.00037201	441.2891278270506	60.911	0.10553	61.03	60.952	61.058	0.11901					5	4	2	0	0	0	0.4196	1	5299	5299		26.796	0	1	33297			62202	11449	41447	41464	70520	70520					0.11561207470799673
VLALVAVLLL	10	Unmodified	_VLALVAVLLL_					0	0	0		ENSG00000127995|ENST00000297273|CASD1	ENSG00000127995|ENST00000297273|CASD1	ENSG00000127995|ENST00000297273|CASD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.360595703125	2	512.362453	1022.71035	-0.36988	-0.00018951	-2.115	-0.0010836	-2.4848	-0.0012731	512.3612922546473	74.051	1.5082	74.094	73.943	75.451	0.043648					113	49	3	0	0	0	0.90957	1	7249	7249		7.6903	0	1	304520			62203	3523	41448	41465	70521	70521					0.1999071497003797
VLALVEGLL	9	Unmodified	_VLALVEGLL_					0	0	0			REV__ENST00000220764.6_1_8:91029361-91029508:+|nuORF	REV__ENST00000220764.6_1_8:91029361-91029508:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.800537109375	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.76996	1	3708	3708		33.516	1.5607	1	1294000	+		62204	24156	41449	41466	70522	70522					0.11905003113804469
VLALVKCQ	8	Unmodified	_VLALVKCQ_					0	0	0		ENST00000356232.8_1_3:132378699-132378999:+|nuORF	ENST00000356232.8_1_3:132378699-132378999:+|nuORF	ENST00000356232.8_1_3:132378699-132378999:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2653503417969	2	437.264956	872.515359	0.72217	0.00031578	1.2532	0.00054797	1.9754	0.00086375	437.26537618148967	22.528	1.4255	22.593	22.19	23.616	0.064745					127	55	5	0	0	0	0.81548	1	725	725		20.482	2.1574	1	944940			62205	10361	41450	41467	70523	70523					0.07400220893396181
VLAMGLLR	8	Unmodified	_VLAMGLLR_					0	0	0			REV__ENST00000447956.5_1_20:2187981-2193678:+|nuORF	REV__ENST00000447956.5_1_20:2187981-2193678:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.274169921875	2	436.772948	871.531344	0.39754	0.00017364	0.64314	0.00028091	1.0407	0.00045454	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.81724	1	1258	1258		14.664	0.88877	1	81327	+		62206	26830	41451	41468	70524	70524					0.09043927130301199
VLAMGYLL	8	Unmodified	_VLAMGYLL_					0	0	0			REV__nc|ENSG00000001497|Q9Y4W2-4|LAS1L	REV__nc|ENSG00000001497|Q9Y4W2-4|LAS1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.25555419921875	2	440.254057	878.493561	0.13015	5.7301E-05	2.6771	0.0011786	2.8072	0.0012359	440.2551148846597	60.577	0.73638	60.608	60.275	61.012	0.0312					48	22	3	0	0	0	0.88393	1	5668	5668		33.493	0	1	201780	+		62207	16039	41452	41469	70525	70525					0.04945416144846604
VLAMSFFI	8	Unmodified	_VLAMSFFI_					0	0	0			REV__ENSG00000129749|ENST00000250699|CHRNA10	REV__ENSG00000129749|ENST00000250699|CHRNA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.253662109375	2	464.254057	926.493561	-1.597	-0.00074142	1.5248	0.00070789	-0.072229	-3.3533E-05	464.25468240321055	83.772	4.77	83.91	82.679	87.449	0.13811					304	110	4	0	0	0	0.89457	1	8268	8268		37.028	1.8278	1	1324500	+		62208	18832	41453	41470	70526	70526					0.027374161448392442
VLAMTDRR	8	Unmodified	_VLAMTDRR_					0	0	0		nc|ENSG00000121753|O60241-4|ADGRB2;nc|ENSG00000121753|O60241-2|ADGRB2;ENSG00000121753|ENST00000373658|ADGRB2;ENST00000530999.1_1_1:32193023-32200902:-|nuORF;nc|ENSG00000121753|O60241-3|ADGRB2;ENST00000465256.5_1_1:32193589-32201220:-|nuORF	nc|ENSG00000121753|O60241-4|ADGRB2;ENST00000465256.5_1_1:32193589-32201220:-|nuORF	nc|ENSG00000121753|O60241-4|ADGRB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2686767578125	2	481.266019	960.517485	-1.3599	-0.00065449	1.2296	0.00059177	-0.13033	-6.2725E-05	481.26649971209946	31.571	0.53422	31.565	31.271	31.805	-0.0061455					19	12	2	0	0	0	0.85277	1	1736	1736		25.45	0	1	39749			62209	3196;12106	41454	41471	70527	70527					0.035646496311983356
VLANKPAV	8	Unmodified	_VLANKPAV_					0	0	0			REV__ENSG00000185736|ENST00000381312|ADARB2	REV__ENSG00000185736|ENST00000381312|ADARB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2573547363281	2	406.255446	810.496338	1.9631	0.00079754	2.4509	0.00099569	4.414	0.0017932	406.25639366891517	55.168	1.6481	55.195	54.525	56.173	0.027142					71	44	2	0	0	0	0.85787	1	4923	4923		9.4706	0.64823	1	211340	+		62210	22789	41455	41472	70528	70528					0.08351007593989834
VLANVLGLL	9	Unmodified	_VLANVLGLL_					0	0	0		ENSG00000008283|ENST00000360793|CYB561;ENST00000584031.5_1_17:61511765-61513383:-|nuORF	ENSG00000008283|ENST00000360793|CYB561	ENSG00000008283|ENST00000360793|CYB561	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30029296875	2	456.299853	910.585153	-0.95599	-0.00043622	2.965	0.0013529	2.009	0.00091669	456.30107129124815	45.178	1.6921	45.147	44.106	45.798	-0.031067					86	38	3	0	0	0	0.67235	1	3703	3703		42.474	7.2737	1	476180			62211	739	41456	41473	70529	70529					0.1262842283365444
VLANVLGLL	9	Unmodified	_VLANVLGLL_					0	0	0		ENSG00000008283|ENST00000360793|CYB561;ENST00000584031.5_1_17:61511765-61513383:-|nuORF	ENSG00000008283|ENST00000360793|CYB561	ENSG00000008283|ENST00000360793|CYB561	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3011474609375	2	456.299853	910.585153	0.25824	0.00011784	2.0816	0.00094982	2.3398	0.0010677	456.3006554004226	45.028	1.9814	45.077	44.089	46.07	0.048996					97	49	3	0	0	0	0.76402	1	3281	3281		35.201	8.4046	1	456360			62212	739	41456	41473	70530	70530					0.1262842283365444
VLANVLGLL	9	Unmodified	_VLANVLGLL_					0	0	0		ENSG00000008283|ENST00000360793|CYB561;ENST00000584031.5_1_17:61511765-61513383:-|nuORF	ENSG00000008283|ENST00000360793|CYB561	ENSG00000008283|ENST00000360793|CYB561	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	456.299853	910.585153	-1.2315	-0.00056193	2.5779	0.0011763	1.3464	0.00061437	456.3008557922113	44.454	1.4637	44.914	44.332	45.796	0.46027	-0.1674	9.657E-06	NaN	42.474	72	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	694750			62213	739	41456	41473							0.1262842283365444
VLANVLGLL	9	Unmodified	_VLANVLGLL_					0	0	0		ENSG00000008283|ENST00000360793|CYB561;ENST00000584031.5_1_17:61511765-61513383:-|nuORF	ENSG00000008283|ENST00000360793|CYB561	ENSG00000008283|ENST00000360793|CYB561	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	456.299853	910.585153	-1.2542	-0.0005723	2.6226	0.0011967	1.3684	0.00062439	456.3009619697233	44.295	1.4641	45.14	44.573	46.037	0.84438	0.058318	5.0422E-05	NaN	42.474	66	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	862500			62214	739	41456	41473							0.1262842283365444
VLAPAVGAD	9	Unmodified	_VLAPAVGAD_					0	0	0		ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.7294006347656	2	406.729261	811.443968	-0.18786	-7.6407E-05	-2.7564	-0.0011211	-2.9442	-0.0011975	406.7280690694445	76.123	2.0682	76.173	74.921	76.99	0.049194					93	66	2	0	0	0	0.7932	1	7373	7373		17.365	0	1	123610			62215	4549	41457	41474	70531	70531					0.030704244603725783
VLAPDHRE	8	Unmodified	_VLAPDHRE_					0	0	0		ENST00000406520.7_1_22:19939075-19948724:+|nuORF	ENST00000406520.7_1_22:19939075-19948724:+|nuORF	ENST00000406520.7_1_22:19939075-19948724:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	468.7481994628906	2	468.748516	935.482479	-1.8157	-0.00085111	1.5319	0.00071809	-0.28378	-0.00013302	468.74926100913456	39.106	0.48018	39.106	38.9	39.38	0					17	11	2	0	0	0	0.90465	1	2481	2481		40.573	4.9543	1	83075			62216	11272	41458	41475	70532	70532					0.012157300948956618
VLAPEEVLI	9	Unmodified	_VLAPEEVLI_					0	0	0			REV__ENST00000553976.1_1_14:55529677-55530620:+|nuORF	REV__ENST00000553976.1_1_14:55529677-55530620:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7961730957031	2	491.794601	981.574648	-1.7961	-0.00088329	4.3361	0.0021325	2.54	0.0012492	491.7966581870457	51.567	1.6539	51.579	50.697	52.351	0.012436					117	46	3	0	0	0	0.7932	1	4471	4471		20.482	0	1	354980	+		62217	28655	41459	41476	70533	70533					0.08312395388577443
VLAPEGSVPNK	11	Unmodified	_VLAPEGSVPNK_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2;chr4:75673298-75673364|52|10.21|0.42|4.59|-|ENST00000677201|G3BP2,G3BP2;ENST00000507947.5_1_4:76580183-76582836:-|nuORF	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.8113403320312	2	555.811313	1109.60807	0.29292	0.00016281	-0.36975	-0.00020551	-0.076827	-4.2702E-05	555.8110268838162	37.491	0.59629	37.805	37.495	38.091	0.31312					48	14	5	0	0	0	4.7087E-05	3	3010	2999;3010;3021		138.06	44.867	1	2386100			62218	432	41460	41477	70534;70535;70536	70535					0.057653971604850085
VLAPEGSVPNK	11	Unmodified	_VLAPEGSVPNK_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2;chr4:75673298-75673364|52|10.21|0.42|4.59|-|ENST00000677201|G3BP2,G3BP2;ENST00000507947.5_1_4:76580183-76582836:-|nuORF	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.811279296875	2	555.811313	1109.60807	0.45928	0.00025528	-0.47938	-0.00026644	-0.020092	-1.1168E-05	555.810896053063	37.356	0.59636	37.842	37.577	38.174	0.4858					46	14	4	0	0	0	0.0057072	4	3013	3002;3013;3028;3041		112.11	40.23	1	2286800			62219	432	41460	41477	70537;70538;70539;70540	70538					0.057653971604850085
VLAPELLLD	9	Unmodified	_VLAPELLLD_					0	0	0		ENSG00000100263|ENST00000216085|RHBDD3	ENSG00000100263|ENST00000216085|RHBDD3	ENSG00000100263|ENST00000216085|RHBDD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7957763671875	2	491.794601	981.574648	-1.4864	-0.00073099	4.0311	0.0019825	2.5447	0.0012515	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.78536	1	4466	4466		29.15	0	1	781720			62220	1814	41461	41478	70541	70541					0.08312395388577443
VLAPELLLD	9	Unmodified	_VLAPELLLD_					0	0	0		ENSG00000100263|ENST00000216085|RHBDD3	ENSG00000100263|ENST00000216085|RHBDD3	ENSG00000100263|ENST00000216085|RHBDD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7945251464844	2	491.794601	981.574648	0.13478	6.6286E-05	1.7464	0.00085886	1.8812	0.00092515	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.7932	1	5683	5683		25.45	0.93098	1	176030			62221	1814	41461	41478	70542	70542					0.08312395388577443
VLAPELLLD	9	Unmodified	_VLAPELLLD_					0	0	0		ENSG00000100263|ENST00000216085|RHBDD3	ENSG00000100263|ENST00000216085|RHBDD3	ENSG00000100263|ENST00000216085|RHBDD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.2978210449219	2	491.794601	981.574648	-0.46236	-0.00022739	2.8733	0.0014131	2.4109	0.0011857	491.7961437087858	67.192	1.3864	67.156	66.452	67.839	-0.035698					84	59	2	0	0	0	0.7932	1	6387	6387		24.203	3.7209	1	58996			62222	1814	41461	41478	70543	70543					0.08312395388577443
VLAPELLLD	9	Unmodified	_VLAPELLLD_					0	0	0		ENSG00000100263|ENST00000216085|RHBDD3	ENSG00000100263|ENST00000216085|RHBDD3	ENSG00000100263|ENST00000216085|RHBDD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7971496582031	2	491.794601	981.574648	-0.22794	-0.0001121	2.4317	0.0011959	2.2037	0.0010838	491.795700180553	50.73	2.2718	51.177	50.348	52.62	0.4476					135	54	3	0	0	0	0.78058	1	5103	5103		30.504	6.3009	1	1342800			62223	1814	41461	41478	70544	70544					0.08312395388577443
VLAPKVEI	8	Unmodified	_VLAPKVEI_					0	0	0		ENST00000551727.5_1_12:104529277-104531339:-|nuORF	ENST00000551727.5_1_12:104529277-104531339:-|nuORF	ENST00000551727.5_1_12:104529277-104531339:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77935791015625	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.939	1	68.972	68.472	69.472	0.033005								0	0	0	0.29631	1	6600	6600		25.45	1.2474	1				62224	13671	41462	41479	70545	70545					0.10388447425293634
VLAPLLGSL	9	Unmodified	_VLAPLLGSL_					0	0	0			REV__nc|ENSG00000101276|Q9NQ40-2|SLC52A3	REV__nc|ENSG00000101276|Q9NQ40-2|SLC52A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7873229980469	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.7932	1	3464	3464		25.45	0	1	325400	+		62225	17260	41463	41480	70546	70546					0.11308733942325944
VLAPPKMK	8	Unmodified	_VLAPPKMK_					0	0	0		nc|ENSG00000088836|Q8NBS3-5|SLC4A11;ENSG00000088836|ENST00000642402|SLC4A11;nc|ENSG00000088836|Q8NBS3-1|SLC4A11;nc|ENSG00000088836|Q8NBS3-4|SLC4A11	nc|ENSG00000088836|Q8NBS3-5|SLC4A11	nc|ENSG00000088836|Q8NBS3-5|SLC4A11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.6011962890625	2	442.275324	882.536095	1.8196	0.00080476	-0.26639	-0.00011782	1.5532	0.00068694	442.2746171453428	103.9	0.46624	103.94	103.79	104.26	0.041481					11	10	2	0	0	0	0.4196	1	11313	11313		28.254	7.7724	1	86569			62226	1596	41464	41481	70547	70547					0.09012811273066745
VLAPPTASI	9	Unmodified	_VLAPPTASI_					0	0	0			REV__ENSG00000037637|ENST00000375592|FBXO42	REV__ENSG00000037637|ENST00000375592|FBXO42	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7596130371094	2	434.760561	867.506569	-1.1839	-0.00051471	-1.2859	-0.00055904	-2.4698	-0.0010738	434.7597390953803	87.854	3.3898	87.854	86.125	89.515	0					151	78	4	0	0	0	0.77546	1	8432	8432		31.955	1.4512	1	789230	+		62227	16297	41465	41482	70548	70548					0.06751570528570028
VLAPSAKAQEA	11	Unmodified	_VLAPSAKAQEA_					0	0	0			REV__nc|ENSG00000136738|Q92783-2|STAM	REV__nc|ENSG00000136738|Q92783-2|STAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	542.803955078125	2	542.803488	1083.59242	0.80945	0.00043937	-0.95283	-0.0005172	-0.14337	-7.7824E-05	542.8027894421456	33.977	0.65944	34.282	33.994	34.653	0.30494					40	15	3	0	0	0	0.41445	1	2505	2505		58.246	3.5239	1	826440	+		62228	19330	41466	41483	70549	70549					0.053971106434119065
VLAQCADAIAD	11	Unmodified	_VLAQCADAIAD_					0	0	0			REV__nc|ENSG00000173064|Q9Y4D8-4|HECTD4	REV__nc|ENSG00000173064|Q9Y4D8-4|HECTD4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.2708129882812	2	545.265881	1088.51721	0.11097	6.0506E-05	-3.7205	-0.0020286	-3.6095	-0.0019681	545.2637562071981	52.69	0.76491	52.666	52.327	53.092	-0.023849					28	18	2	0	0	0	0.65746	1	4694	4694		37.812	4.2959	1	191670	+		62229	21883	41467	41484	70550	70550					-0.02350814879309837
VLARCVNKRV	10	Unmodified	_VLARCVNKRV_					0	0	0			REV__nc|ENSG00000083312|Q92973-3|TNPO1;REV__nc|ENSG00000105576|O14787-2|TNPO2	REV__nc|ENSG00000083312|Q92973-3|TNPO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.3502807617188	2	579.350417	1156.68628	-0.73793	-0.00042752	-0.36707	-0.00021266	-1.105	-0.00064018	579.3507810148151	86.876	1.2366	87.322	86.654	87.89	0.44628					39	29	2	0	0	0	0.71042	1	10187	10187		44.117	3.5442	1	533800	+		62230	16852;17553	41468	41485	70551	70551					0.11420551264700407
VLARFGGS	8	Unmodified	_VLARFGGS_					0	0	0			REV__ENST00000380775.3_7:74304498-74306638:-|nuORF	REV__ENST00000380775.3_7:74304498-74306638:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.73077392578125	2	403.729595	805.444637	2.7323	0.0011031	-0.40392	-0.00016307	2.3284	0.00094003	403.72925673314853	99.693	1.4907	100.03	99.108	100.6	0.33294					77	37	3	0	0	0	0.87479	1	12043	12043		30.504	2.2494	1	609450	+		62231	25954	41469	41486	70552	70552					0.03413263900108632
VLARGKLL	8	Unmodified	_VLARGKLL_					0	0	0			REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.30029296875	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.81724	1	6803	6803		14.664	0	1	1072400	+		62232	16940	41470	41487	70553	70553					0.14627262273381803
VLARGKLL	8	Unmodified	_VLARGKLL_					0	0	0			REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3000183105469	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.80963	4	6776	6776;6793;6964;6994		15.636	0.97212	1	1680500	+		62233	16940	41470	41487	70554;70555;70556;70557	70554					0.14627262273381803
VLARGKLL	8	Unmodified	_VLARGKLL_					0	0	0			REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3001403808594	2	435.300188	868.585822	-0.7008	-0.00030506	0.91051	0.00039634	0.20971	9.1285E-05	435.300442233961	72.028	2.9209	71.987	70.647	73.567	-0.04039					338	123	3	0	0	0	0.80963	3	6967	6936;6967;7020		15.636	0.97212	1	1702600	+		62234	16940	41470	41487	70558;70559;70560	70559					0.14627262273381803
VLARGKLL	8	Unmodified	_VLARGKLL_					0	0	0			REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.29876708984375	2	435.300188	868.585822	-0.33292	-0.00014492	0.65367	0.00028454	0.32075	0.00013962	435.30030600334584	75.563	1.7203	75.517	74.991	76.711	-0.045975					102	48	3	0	0	0	0.81724	1	7512	7512		14.664	0	1	492420	+		62235	16940	41470	41487	70561	70561					0.14627262273381803
VLARGKLL	8	Unmodified	_VLARGKLL_					0	0	0			REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2998352050781	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.80963	2	6856	6856;6889		15.636	0.97212	1	1921500	+		62236	16940	41470	41487	70562;70563	70562					0.14627262273381803
VLARGKLL	8	Unmodified	_VLARGKLL_					0	0	0			REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.30035400390625	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.85228	4	6526	6489;6526;6543;7065		10.185	0.71421	1	2081500	+		62237	16940	41470	41487	70564;70565;70566;70567	70565					0.14627262273381803
VLARGKLL	8	Unmodified	_VLARGKLL_					0	0	0			REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.30023193359375	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.81724	1	6649	6649		14.664	0	1	1819800	+		62238	16940	41470	41487	70568	70568					0.14627262273381803
VLARGKLL	8	Unmodified	_VLARGKLL_					0	0	0			REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.3003234863281	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.80963	6	6501	6453;6463;6496;6501;6634;6925		15.636	0.97212	1	1852500	+		62239	16940	41470	41487	70569;70570;70571;70572;70573;70574	70572					0.14627262273381803
VLARGKLL	8	Unmodified	_VLARGKLL_					0	0	0			REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	REV__nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2992248535156	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.82464	1	8548	8548		21.702	0	1	5485100	+		62240	16940	41470	41487	70575	70575					0.14627262273381803
VLARGVRLLV	10	Unmodified	_VLARGVRLLV_					0	0	0			REV__ENST00000473749.1_1_2:160569052-160585528:+|nuORF	REV__ENST00000473749.1_1_2:160569052-160585528:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.3745727539062	2	548.371675	1094.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.508	1	37.449	36.949	37.949	-0.058376								0	0	0	0.45132	1	2151	2151		16.473	0.83134	1		+		62241	26494	41471	41488	70576	70576					0.18522269664595115
VLARIRISDK	10	Unmodified	_VLARIRISDK_					0	0	0			REV__nc|ENSG00000140553|Q9H3U1-2|UNC45A	REV__nc|ENSG00000140553|Q9H3U1-2|UNC45A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.8661499023438	2	585.869497	1169.72444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.487	1	26.298	25.798	26.798	-0.18898								0	0	0	0.45132	1	1454	1454		39.253	7.723	1		+		62242	19630	41472	41489	70577	70577					0.1463676045102602
VLARLGLK	8	Unmodified	_VLARLGLK_					0	0	0		ENSG00000171487|ENST00000390649|NLRP5	ENSG00000171487|ENST00000390649|NLRP5	ENSG00000171487|ENST00000390649|NLRP5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.29998779296875	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.86294	1	6623	6623		8.8223	0	1	1852500			62243	6670	41473	41490	70578	70578					0.14627262273370434
VLARTKVF	8	Unmodified	_VLARTKVF_					0	0	0			REV__nc|ENSG00000107201|O95786-2|RIGI	REV__nc|ENSG00000107201|O95786-2|RIGI	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.29656982421875	2	467.297645	932.580737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.246	1	63.36	62.86	63.86	0.11388								0	0	0	0.29344	1	5532	5532		31.955	2.8053	1		+		62244	17650	41474	41491	70579	70579					0.11174958410754243
VLASGKALVF	10	Unmodified	_VLASGKALVF_					0	0	0		nc|ENSG00000189056|P78509-3|RELN;nc|ENSG00000189056|P78509-2|RELN;ENSG00000189056|ENST00000428762|RELN	nc|ENSG00000189056|P78509-3|RELN	nc|ENSG00000189056|P78509-3|RELN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8139953613281	2	502.810585	1003.60662	2.3403	0.0011767	3.7237	0.0018723	6.064	0.003049	502.8125095454433	97.334	3.7238	97.279	96.672	100.4	-0.055542					261	86	6	0	0	0	0.53935	1	10524	10524		53.351	1.0523	1	22474000			62245	7984	41475	41492	70580	70580					0.10495807862366746
VLASLLPLLL	10	Unmodified	_VLASLLPLLL_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3607177734375	2	526.359911	1050.70527	0.054232	2.8545E-05	1.9819	0.0010432	2.0362	0.0010718	526.3608595612541	33.548	1.6551	33.491	33.113	34.768	-0.056385					153	37	5	0	0	0	0.8488	1	2193	2193		17.365	5.1581	1	7840300	+		62246	18541	41476	41493	70581	70581					0.18194411107424457
VLASLLPLLL	10	Unmodified	_VLASLLPLLL_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3614501953125	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.88106	1	2217	2217		12.207	0	1	2871800	+		62247	18541	41476	41493	70582	70582					0.18194411107424457
VLASLLPLLL	10	Unmodified	_VLASLLPLLL_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.360107421875	2	526.359911	1050.70527	-0.47346	-0.00024921	2.7476	0.0014462	2.2741	0.001197	526.3612126681783	35.14	1.5704	35.146	34.727	36.297	0.0063934					147	36	5	0	0	0	0.84874	2	2280	2197;2280		24.203	0	1	2682400	+		62248	18541	41476	41493	70583;70584	70584					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.361083984375	2	526.359911	1050.70527	-1.5923	-0.00083811	3.7176	0.0019568	2.1254	0.0011187	526.3617428180578	33.41	1.543	33.41	33.111	34.654	0					182	44	5	0	0	0	0.86201	3	1765	1765;1790;1804		30.504	0	1	7280900			62249	7528	41477	41494	70585;70586;70587	70585					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3611450195312	2	526.359911	1050.70527	0.086645	4.5607E-05	2.1771	0.0011459	2.2637	0.0011915	526.3609236587663	33.368	2.0596	33.371	32.762	34.822	0.0030785					171	48	5	0	0	0	0.86201	1	1980	1980		24.203	0	1	3096800			62250	7528	41477	41494	70588	70588					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.3607177734375	2	526.359911	1050.70527	0.084083	4.4258E-05	2.4224	0.0012751	2.5065	0.0013193	526.3609970973437	37.291	2.7124	37.267	36.145	38.858	-0.023979					175	61	4	0	0	0	0.8488	3	2446	2304;2328;2446		17.365	0	1	781950			62251	7528	41477	41494	70589;70590;70591	70591					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3610229492188	2	526.359911	1050.70527	0.054232	2.8545E-05	1.9819	0.0010432	2.0362	0.0010718	526.3608595612541	33.548	1.6551	33.491	33.113	34.768	-0.056385					153	37	5	0	0	0	0.86452	1	2019	2019		30.504	0	1	7840300			62252	7528	41477	41494	70592	70592					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.36083984375	2	526.359911	1050.70527	-0.46682	-0.00024572	2.8843	0.0015182	2.4174	0.0012724	526.3612792747932	37.192	2.9497	37.138	36.203	39.152	-0.053555					173	66	5	0	0	0	0.71042	3	2495	2483;2495;2543		44.117	0	1	2681300			62253	7528	41477	41494	70593;70594;70595	70594					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3611450195312	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.86452	2	1933	1933;2122		30.504	0	1	5020100			62254	7528	41477	41494	70596;70597	70596					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3590698242188	2	526.359911	1050.70527	-0.47346	-0.00024921	2.7476	0.0014462	2.2741	0.001197	526.3612126681783	35.14	1.5704	35.146	34.727	36.297	0.0063934					147	36	5	0	0	0	0.85939	2	2292	2167;2292		24.203	0	1	2682400			62255	7528	41477	41494	70598;70599	70599					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3596801757812	2	526.359911	1050.70527	-0.92311	-0.00048589	3.3408	0.0017585	2.4177	0.0012726	526.361534914309	37.119	3.9927	37.13	36.167	40.159	0.011173					219	91	5	0	0	0	0.85939	1	2540	2540		23.042	0	1	2706400			62256	7528	41477	41494	70600	70600					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.361328125	2	526.359911	1050.70527	-0.23001	-0.00012107	2.5809	0.0013585	2.3509	0.0012374	526.3611422284945	33.372	1.4852	33.418	33.076	34.561	0.045849					221	65	5	0	0	0	0.86305	1	1591	1591		31.955	0	1	5657100			62257	7528	41477	41494	70601	70601					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3610229492188	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.85438	1	1829	1829		16.473	0	1	1497200			62258	7528	41477	41494	70602	70602					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3613891601562	2	526.359911	1050.70527	0.22046	0.00011604	2.2181	0.0011675	2.4386	0.0012836	526.3609252843382	33.187	1.6469	33.296	32.993	34.64	0.10991					241	72	5	0	0	0	0.86201	1	1662	1662		24.203	0	1	5657400			62259	7528	41477	41494	70603	70603					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3544311523438	2	526.359911	1050.70527	0.35001	0.00018423	2.2149	0.0011658	2.5649	0.0013501	526.3608782075506	35.208	1.82	35.153	34.593	36.413	-0.055149					177	64	4	0	0	0	0.85694	1	1923	1923		21.96	4.5949	1	1221500			62260	7528	41477	41494	70604	70604					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.3617553710938	2	526.359911	1050.70527	0.76967	0.00040513	1.4348	0.00075522	2.2045	0.0011603	526.360521421971	32.911	1.6488	33.081	32.46	34.109	0.16971					152	38	5	0	0	0	0.777	2	2305	2305;2317		40.573	0	1	7968500			62261	7528	41477	41494	70605;70606	70605					0.18194411107424457
VLASLPLLLL	10	Unmodified	_VLASLPLLLL_					0	0	0		ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	ENSG00000183396|ENST00000330862|TMEM89	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3606567382812	2	526.359911	1050.70527	1.0713	0.00056389	1.2303	0.0006476	2.3016	0.0012115	526.360423923534	32.788	1.6436	32.999	32.422	34.066	0.21168					152	38	5	0	0	0	0.85939	1	2457	2457		23.042	0	1	7743700			62262	7528	41477	41494	70607	70607					0.18194411107424457
VLASSFSFLFV	11	Unmodified	_VLASSFSFLFV_					0	0	0			REV__ENST00000495054.1_1_1:149903225-149903459:-|nuORF	REV__ENST00000495054.1_1_1:149903225-149903459:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	608.8373413085938	2	608.834257	1215.65396	1.1133	0.00067784	4.2493	0.0025871	5.3627	0.003265	608.836684936877	110.21	0.79676	110.33	110.13	110.93	0.11658					62	26	4	0	0	0	0.72228	1	11860	11860		27.882	7.8855	1	3625100	+		62263	27727	41478	41495	70608	70608					0.05476042342706933
VLASSHRSA	9	Unmodified	_VLASSHRSA_					0	0	0		ENSG00000108387|ENST00000672673|SEPTIN4;nc|ENSG00000108387|O43236-8|SEPTIN4	ENSG00000108387|ENST00000672673|SEPTIN4	ENSG00000108387|ENST00000672673|SEPTIN4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.2538146972656	2	464.253966	926.493378	-1.0566	-0.00049054	1.1786	0.00054717	0.12198	5.6631E-05	464.25442559641624	83.786	6.5566	83.952	80.993	87.549	0.1651					374	153	4	0	0	0	0.76764	1	8171	8171		34.173	0	1	1603800			62264	2403	41479	41496	70609	70609					0.027191324691898444
VLASTPLRYG	10	Unmodified	_VLASTPLRYG_					0	0	0			REV__ENSG00000114127|ENST00000392981|XRN1	REV__ENSG00000114127|ENST00000392981|XRN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.8067016601562	2	538.808574	1075.60259	-1.4886	-0.00080208	-1.9733	-0.0010633	-3.462	-0.0018653	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.67571	1	9031	9031		45.972	10.354	1	783690	+		62265	18034	41480	41497	70610	70610					0.06781718368665679
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78009033203125	2	434.778754	867.542954	-0.033173	-1.4423E-05	3.6612	0.0015918	3.628	0.0015774	434.78016112068724	33.457	1.6428	33.46	32.362	34.005	0.0030785					82	39	3	0	0	0	0.7932	1	1941	1941		18.324	0	1	229790	+		62266	26447	41481	41498	70611	70611					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7799377441406	2	434.778754	867.542954	-0.16827	-7.316E-05	3.0347	0.0013194	2.8664	0.0012463	434.7799549539411	61.813	0.95731	61.803	61.544	62.502	-0.0094147					63	42	2	0	0	0	0.7932	1	5729	5729		18.324	0	1	307740	+		62267	26447	41481	41498	70612	70612					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78009033203125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.383	1	66.393	65.893	66.893	0.010452								0	0	0	0.34024	1	6225	6225		17.365	0	1		+		62268	26447	41481	41498	70613	70613					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78021240234375	2	434.778754	867.542954	-0.61894	-0.0002691	3.8256	0.0016633	3.2067	0.0013942	434.7803762451805	34.577	0.94073	34.521	33.912	34.853	-0.056381					81	20	5	0	0	0	0.76402	1	2210	2210		35.201	0	1	3842800	+		62269	26447	41481	41498	70614	70614					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77984619140625	2	434.778754	867.542954	-1.2494	-0.00054321	3.5325	0.0015359	2.2831	0.00099266	434.7801616022163	41.477	1.7868	41.436	40.922	42.709	-0.04081					147	45	4	0	0	0	0.76402	1	3305	3305		35.201	1.6851	1	2800900	+		62270	26447	41481	41498	70615	70615					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7787780761719	2	434.778754	867.542954	-1.003	-0.00043608	3.6101	0.0015696	2.6071	0.0011335	434.7801973515074	45.237	1.8216	45.206	44.189	46.01	-0.031067					113	41	4	0	0	0	0.76996	1	3730	3730		33.516	0	1	1431800	+		62271	26447	41481	41498	70616	70616					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7797546386719	2	434.778754	867.542954	-0.81007	-0.0003522	3.4341	0.0014931	2.624	0.0011409	434.7801064754335	48.077	2.7534	48.052	47.541	50.295	-0.025112					179	68	4	0	0	0	0.76996	1	4134	4134		33.516	0	1	1940000	+		62272	26447	41481	41498	70617	70617					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77923583984375	2	434.778754	867.542954	-0.52026	-0.0002262	3.3297	0.0014477	2.8095	0.0012215	434.78008033903114	55.345	1.972	55.318	54.208	56.18	-0.027275					116	58	3	0	0	0	0.76996	1	5063	5063		33.516	0	1	290730	+		62273	26447	41481	41498	70618	70618					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7806091308594	2	434.778754	867.542954	1.0211	0.00044394	2.4757	0.0010764	3.4967	0.0015203	434.77962104590523	33.405	1.0416	33.404	32.826	33.868	-0.0016365					60	24	3	0	0	0	0.78058	1	2016	2016		30.504	2.6214	1	347080	+		62274	26447	41481	41498	70619	70619					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.78033447265625	2	434.778754	867.542954	0.085891	3.7343E-05	2.526	0.0010983	2.6119	0.0011356	434.77973178522114	39.697	1.6335	39.706	39.141	40.774	0.0092812					137	39	4	0	0	0	0.7932	1	2754	2754		26.796	1.3459	1	4100400	+		62275	26447	41481	41498	70620	70620					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.779052734375	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.76996	2	3291	3246;3291		33.516	0	1	1177900	+		62276	26447	41481	41498	70621;70622	70622					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7797546386719	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.7932	1	3483	3483		25.45	1.2474	1	2364100	+		62277	26447	41481	41498	70623	70623					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799987792969	2	434.778754	867.542954	0.12745	5.5413E-05	3.4254	0.0014893	3.5528	0.0015447	434.7800727481765	33.235	0.77096	33.345	33.052	33.823	0.10991					78	32	3	0	0	0	0.7932	1	1614	1614		26.796	0	1	320750	+		62278	26447	41481	41498	70624	70624					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801818847656	2	434.778754	867.542954	0.14249	6.1952E-05	3.3836	0.0014711	3.5261	0.0015331	434.78005229287373	34.82	1.3858	34.926	34.636	36.022	0.10603					169	50	4	0	0	0	0.76996	1	1795	1795		33.516	3.674	1	2251100	+		62279	26447	41481	41498	70625	70625					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7790832519531	2	434.778754	867.542954	0.18498	8.0427E-05	2.9584	0.0012863	3.1434	0.0013667	434.7799222967292	39.501	1.6389	39.589	38.953	40.592	0.088375					151	45	4	0	0	0	0.7932	1	2572	2572		25.45	3.7478	1	4736600	+		62280	26447	41481	41498	70626	70626					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7792053222656	2	434.778754	867.542954	0.21657	9.4159E-05	2.4176	0.0010511	2.6342	0.0011453	434.7796993159015	43.083	1.8135	43.14	42.454	44.267	0.056744					123	45	3	0	0	0	0.76996	1	3038	3038		33.516	3.674	1	2537300	+		62281	26447	41481	41498	70627	70627					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7799377441406	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.7932	1	3479	3479		26.796	0	1	2750200	+		62282	26447	41481	41498	70628	70628					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7800598144531	2	434.778754	867.542954	0.38509	0.00016743	2.4443	0.0010627	2.8294	0.0012301	434.77974914069443	61.654	1.1298	61.773	61.481	62.611	0.11901					111	53	3	0	0	0	0.76996	1	5356	5356		33.516	1.5607	1	353960	+		62283	26447	41481	41498	70629	70629					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77960205078125	2	434.778754	867.542954	0.40213	0.00017484	2.6977	0.0011729	3.0998	0.0013477	434.7798484854561	63.65	2.6384	63.772	62.533	65.171	0.12252					155	108	2	0	0	0	0.77546	1	5522	5522		31.955	5.1588	1	206770	+		62284	26447	41481	41498	70630	70630					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7785949707031	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.253	1	66.38	65.88	66.88	0.12649								0	0	0	0.31088	1	5880	5880		26.796	0	1		+		62285	26447	41481	41498	70631	70631					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77734375	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.7932	1	1949	1949		24.203	1.1603	1	4750000	+		62286	26447	41481	41498	70632	70632					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.780029296875	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.7932	1	2186	2186		18.324	0	1	2486400	+		62287	26447	41481	41498	70633	70633					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.780029296875	2	434.778754	867.542954	-0.10818	-4.7034E-05	3.1846	0.0013846	3.0765	0.0013376	434.7800213108271	39.594	1.7303	39.546	38.941	40.672	-0.04789					162	53	5	0	0	0	0.76996	1	2498	2498		33.516	6.7195	1	5065300	+		62288	26447	41481	41498	70634	70634					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7799377441406	2	434.778754	867.542954	-0.61408	-0.00026699	3.3286	0.0014472	2.7146	0.0011802	434.78015323105376	52.924	3.3917	52.849	52.471	55.862	-0.074512					147	100	2	0	0	0	0.7932	1	4394	4394		18.324	0	1	526750	+		62289	26447	41481	41498	70635	70635					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77911376953125	2	434.778754	867.542954	-0.97374	-0.00042336	4.0019	0.0017399	3.0281	0.0013166	434.78044280268495	64.271	3.3612	64.301	62.229	65.59	0.030243					229	142	2	0	0	0	0.7932	1	5574	5574		25.45	0	1	223270	+		62290	26447	41481	41498	70636	70636					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7789001464844	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.943	1	68.003	67.503	68.503	0.059288								0	0	0	0.32894	1	6076	6076		20.482	0	1		+		62291	26447	41481	41498	70637	70637					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7799987792969	2	434.778754	867.542954	0.46666	0.00020289	2.7835	0.0012102	3.2502	0.0014131	434.77985980396335	34.116	1.9569	34.326	33.482	35.439	0.21003					163	47	4	0	0	0	0.7932	1	2432	2432		25.45	0	1	8013100	+		62292	26447	41481	41498	70638	70638					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7789001464844	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.67235	1	3770	3770		42.474	14.22	1	6567600	+		62293	26447	41481	41498	70639	70639					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7791442871094	2	434.778754	867.542954	-0.97799	-0.00042521	2.2819	0.00099211	1.3039	0.0005669	434.7796012796187	43.693	1.006	44.143	43.436	44.442	0.45024					66	24	3	0	0	0	0.76996	1	3893	3893		33.516	1.5607	1	2290300	+		62294	26447	41481	41498	70640	70640					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.76996	1	2509	2509		33.516	0	1	7451800	+		62295	26447	41481	41498	70641	70641					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	434.778754	867.542954	1.5094	0.00065624	1.8704	0.00081321	3.3798	0.0014694	434.7794635539601	36.504	1.1186	36.944	36.745	37.863	0.44043					77	26	3	0	0	0	0.67235	1	2912	2912		42.474	0	1	5607300	+		62296	26447	41481	41498	70642	70642					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77996826171875	2	434.778754	867.542954	0.24981	0.00010861	3.5134	0.0015276	3.7632	0.0016362	434.78017285768743	37.739	1.2173	38.259	37.943	39.16	0.51989					114	30	4	0	0	0	0.5393	1	3197	3197		50.025	2.1089	1	8689200	+		62297	26447	41481	41498	70643	70643					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.779052734375	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.69914	2	3379	3225;3379		40.573	7.7521	1	15771000	+		62298	26447	41481	41498	70644;70645	70645					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801208496094	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.7932	1	3764	3764		25.45	0	1	6824500	+		62299	26447	41481	41498	70646	70646					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77984619140625	2	434.778754	867.542954	-0.91901	-0.00039957	3.2028	0.0013925	2.2837	0.00099292	434.7800246732522	44.2	1.4198	45.044	44.534	45.954	0.84437					118	34	4	0	0	0	0.77546	1	4096	4096		31.955	2.1133	1	4932000	+		62300	26447	41481	41498	70647	70647					0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.5306	-0.00066545	4.62	0.0020087	3.0894	0.0013432	434.7807122834823	64.379	2.6893	64.379	62.586	65.275	0	0.2666	0.0010036	NaN	31.955	157	124	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104930	+		62301	26447	41481	41498							0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	434.778754	867.542954	-0.16813	-7.3098E-05	3.1975	0.0013902	3.0294	0.0013171	434.7800881899548	63.994	2.7248	63.993	62.51	65.235	-0.00078583	-0.11893	-0.00023331	NaN	31.955	167	104	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186440	+		62302	26447	41481	41498							0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	434.778754	867.542954	-1.1852	-0.00051531	4.5441	0.0019757	3.3589	0.0014604	434.780616869807	38.184	1.3942	38.134	37.761	39.155	-0.050373	-0.08469	0.00042153	NaN	50.025	122	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2297400	+		62303	26447	41481	41498							0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	434.778754	867.542954	0.53992	0.00023475	2.3715	0.0010311	2.9115	0.0012658	434.7797051939565	61.718	1.0878	61.748	61.435	62.522	0.029575	0.050924	-0.00036521	NaN	33.516	82	49	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224940	+		62304	26447	41481	41498							0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	434.778754	867.542954	0.67011	0.00029135	2.2738	0.00098859	2.9439	0.0012799	434.7797190459747	63.868	2.8603	63.895	62.469	65.329	0.027142	-0.21751	-0.0010366	NaN	31.955	167	106	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173910	+		62305	26447	41481	41498							0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.778754	867.542954	-1.5987	-0.00069507	4.6509	0.0020221	3.0522	0.001327	434.7807008122987	63.874	2.2145	63.994	62.307	64.522	0.12004	-0.11856	0.0010305	NaN	31.955	176	105	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	234460	+		62306	26447	41481	41498							0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	434.778754	867.542954	-1.6459	-0.00071562	4.9547	0.0021542	3.3088	0.0014386	434.78079373648967	38.131	1.5241	38.148	37.714	39.238	0.016563	-0.070771	0.00077857	NaN	50.025	135	46	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2358200	+		62307	26447	41481	41498							0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	434.778754	867.542954	0.40213	0.00017484	2.6977	0.0011729	3.0998	0.0013477	434.7798484854561	63.65	2.6384	63.772	62.533	65.171	0.12252	-0.33974	-0.00066795	NaN	31.955	155	108	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206770	+		62308	26447	41481	41498							0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	434.778754	867.542954	-0.97374	-0.00042336	4.0019	0.0017399	3.0281	0.0013166	434.78044280268495	64.271	3.3612	64.301	62.229	65.59	0.030243	0.18882	0.0004661	NaN	31.955	229	142	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	223270	+		62309	26447	41481	41498							0.10388447425293634
VLATAAPLL	9	Unmodified	_VLATAAPLL_					0	0	0			REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	REV__ENST00000417559.1_1_10:82289453-82295456:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	434.778754	867.542954	-0.96796	-0.00042085	3.6386	0.001582	2.6706	0.0011611	434.7802543697401	61.184	0.95838	61.573	61.447	62.405	0.38945	-0.12362	0.00073654	NaN	33.516	37	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206800	+		62310	26447	41481	41498							0.10388447425293634
VLATAKHSR	9	Unmodified	_VLATAKHSR_					0	0	0		ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	ENSG00000082516|ENST00000285873|GEMIN5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7970275878906	2	491.793258	981.571963	0.42504	0.00020903	4.4189	0.0021732	4.8439	0.0023822	491.7954861357076	59.345	2.1315	59.459	58.989	61.12	0.11396					113	74	3	0	0	0	0.7932	1	5046	5046		23.523	1.8204	1	139720			62311	1487	41482	41499	70648	70648					0.08043984774280943
VLATICLAH	9	Unmodified	_VLATICLAH_					0	0	0		ENST00000487364.1_1_19:19771386-19774475:-|nuORF;ENSG00000105726|ENST00000357324|ATP13A1	ENST00000487364.1_1_19:19771386-19774475:-|nuORF	ENST00000487364.1_1_19:19771386-19774475:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.76922607421875	2	470.767863	939.521173	-0.0079822	-3.7578E-06	2.242	0.0010555	2.2341	0.0010517	470.7688392361173	51.36	0.75376	51.795	51.534	52.288	0.43505					46	17	4	0	0	0	0.64338	1	5120	5120		44.531	0.41427	1	3116800			62312	2248	41483	41500	70649	70649					0.048993194050581224
VLATLGLILL	10	Unmodified	_VLATLGLILL_					0	0	0		ENSG00000198663|ENST00000480824|C6orf89;nc|nan|Q6UWU4-2|C6orf89	ENSG00000198663|ENST00000480824|C6orf89	ENSG00000198663|ENST00000480824|C6orf89	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.318359375	2	513.352086	1024.68962	-0.42406	-0.00021769	-2.1205	-0.0010886	-2.5446	-0.0013063	513.3508158523452	55.921	1.2478	55.884	54.887	56.135	-0.036823					65	41	2	0	0	0	0.37624	1	4630	4630		23.042	4.7181	1	97310			62313	8301	41484	41501	70650	70650					0.1782612459039683
VLATLMQSILK	11	Unmodified	_VLATLMQSILK_					0	0	0			REV__ENSG00000124279|ENST00000264669|FASTKD3	REV__ENSG00000124279|ENST00000264669|FASTKD3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2486877441406	3	406.249303	1215.72608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.71	1	117.68	117.18	118.18	-0.02433								0	0	0	0.56276	1	13034	13034		20.03	0.7678	1		+		62314	18577	41485	41502	70651	70651					0.12684633424782987
VLATLTVVP	9	Unmodified	_VLATLTVVP_					0	0	0		ENSG00000198670|ENST00000316300|LPA	ENSG00000198670|ENST00000316300|LPA	ENSG00000198670|ENST00000316300|LPA	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7895812988281	2	456.791861	911.569169	-1.8243	-0.00083333	3.8628	0.0017645	2.0385	0.00093118	456.79351239349603	42.367	6.2284	42.367	40.647	46.876	0					283	162	4	0	0	0	0.77546	1	3140	3140		31.955	0	1	759950			62315	8302	41486	41503	70652	70652					0.10984716596760791
VLATLTVVP	9	Unmodified	_VLATLTVVP_					0	0	0		ENSG00000198670|ENST00000316300|LPA	ENSG00000198670|ENST00000316300|LPA	ENSG00000198670|ENST00000316300|LPA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7931823730469	2	456.791861	911.569169	-0.85953	-0.00039263	3.5719	0.0016316	2.7123	0.001239	456.7934335420697	36.323	3.5767	36.267	33.824	37.401	-0.055901					213	80	5	0	0	0	0.67235	1	2428	2428		42.474	0	1	4833100			62316	8302	41486	41503	70653	70653					0.10984716596760791
VLATLTVVP	9	Unmodified	_VLATLTVVP_					0	0	0		ENSG00000198670|ENST00000316300|LPA	ENSG00000198670|ENST00000316300|LPA	ENSG00000198670|ENST00000316300|LPA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7926330566406	2	456.791861	911.569169	-0.41733	-0.00019063	3.2307	0.0014758	2.8134	0.0012851	456.79324628175203	50.167	3.1243	50.075	48.485	51.609	-0.091797					154	81	3	0	0	0	0.77546	1	3883	3883		31.955	6.5047	1	198490			62317	8302	41486	41503	70654	70654					0.10984716596760791
VLATSIWFD	9	Unmodified	_VLATSIWFD_					0	0	0			REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	REV__ENST00000554523.5_1_14:68228796-68282710:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	526.360595703125	2	526.276575	1050.5386	-0.016558	-8.7143E-06	-3.3649	-0.0017709	-3.3815	-0.0017796	526.2747426211589	35.428	0.67418	35.416	35.208	35.882	-0.012203					24	14	2	0	0	0	0.20789	1	2254	2254		45.952	3.5558	1	55797	+		62318	16637	41487	41504	70655	70655					0.015349382117165078
VLATVAKPI	9	Unmodified	_VLATVAKPI_					0	0	0		ENST00000414863.2_1_X:97506861-97507095:+|nuORF	ENST00000414863.2_1_X:97506861-97507095:+|nuORF	ENST00000414863.2_1_X:97506861-97507095:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3006286621094	2	456.299853	910.585153	-0.23118	-0.00010549	2.4791	0.0011312	2.2479	0.0010257	456.30086790597977	45.013	2.0189	44.944	43.946	45.965	-0.068634					97	50	2	0	0	0	0.78536	1	3202	3202		29.15	0	1	498520			62319	11373	41489	41505	70656	70656					0.1262842283365444
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7931213378906	2	456.791861	911.569169	-0.042653	-1.9484E-05	2.8269	0.0012913	2.7842	0.0012718	456.79307389883803	36.432	2.1584	36.413	35.42	37.578	-0.018673					171	47	5	0	0	0	0.72402	2	2331	2331;2379		38.806	5.2906	1	4460800	+		62320	18527	41490	41506	70657;70658	70657					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7928161621094	2	456.791861	911.569169	0.10619	4.8505E-05	2.6551	0.0012128	2.7613	0.0012614	456.7929673289598	38.995	1.2001	38.965	38.494	39.694	-0.03027					96	27	4	0	0	0	0.78058	1	2653	2653		30.504	6.3009	1	2198500	+		62321	18527	41490	41506	70659	70659					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79150390625	2	456.791861	911.569169	0.22903	0.00010462	1.6949	0.00077423	1.924	0.00087885	456.7925329263355	42.593	4.9393	42.563	41.911	46.85	-0.029461					215	119	2	0	0	0	0.7932	1	3124	3124		25.45	6.0902	1	662040	+		62322	18527	41490	41506	70660	70660					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7928161621094	2	456.791861	911.569169	-1.1724	-0.00053555	3.9802	0.0018181	2.8078	0.0012826	456.7935742947897	38.88	1.6337	38.833	37.942	39.576	-0.047001					120	37	4	0	0	0	0.7932	1	2714	2714		25.45	0	1	2323700	+		62323	18527	41490	41506	70661	70661					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7920227050781	2	456.791861	911.569169	-0.77088	-0.00035213	3.6137	0.0016507	2.8428	0.0012986	456.7934149314151	47.886	0.97208	47.859	47.644	48.616	-0.026737					41	25	2	0	0	0	0.77546	1	4035	4035		31.955	1.4512	1	216120	+		62324	18527	41490	41506	70662	70662					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7930908203125	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.474	1	47.447	46.947	47.947	-0.026737								0	0	0	0.29103	1	3961	3961		40.573	7.057	1		+		62325	18527	41490	41506	70663	70663					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7927551269531	2	456.791861	911.569169	-1.4626	-0.0006681	4.253	0.0019428	2.7904	0.0012746	456.7937012430135	38.803	1.6993	38.814	37.946	39.646	0.011173					92	39	3	0	0	0	0.76996	1	2640	2640		33.516	0	1	2267400	+		62326	18527	41490	41506	70664	70664					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7911682128906	2	456.791861	911.569169	0.05486	2.506E-05	2.6152	0.0011946	2.6701	0.0012197	456.79295826454774	49.784	2.1713	49.788	48.709	50.88	0.0035973					85	53	2	0	0	0	0.7932	1	4223	4223		25.45	0	1	208660	+		62327	18527	41490	41506	70665	70665					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7933044433594	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.7932	1	2321	2321		23.042	4.7181	1	1834900	+		62328	18527	41490	41506	70666	70666					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7908020019531	2	456.791861	911.569169	-1.2376	-0.00056532	3.7836	0.0017283	2.5461	0.001163	456.79347564689675	46.375	1.5387	46.391	45.441	46.979	0.015511					66	42	2	0	0	0	0.7932	1	3359	3359		18.324	0	1	175320	+		62329	18527	41490	41506	70667	70667					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79302978515625	2	456.791861	911.569169	0.20144	9.2015E-05	2.7795	0.0012696	2.9809	0.0013616	456.79301419254114	38.74	1.332	38.834	38.396	39.728	0.094318					137	38	4	0	0	0	0.7932	1	2272	2272		23.042	0	1	1693200	+		62330	18527	41490	41506	70668	70668					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.79095458984375	2	456.791861	911.569169	0.30037	0.00013721	2.5195	0.0011509	2.8199	0.0012881	456.79289757972145	49.9	2.3678	49.942	48.602	50.969	0.04224					107	64	2	0	0	0	0.7932	1	3770	3770		24.203	0	1	208080	+		62331	18527	41490	41506	70669	70669					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7911376953125	2	456.791861	911.569169	-0.41733	-0.00019063	3.2307	0.0014758	2.8134	0.0012851	456.79324628175203	50.167	3.1243	50.075	48.485	51.609	-0.091797					154	81	3	0	0	0	0.5393	1	3891	3891		50.025	0	1	198490	+		62332	18527	41490	41506	70670	70670					0.10984716596760791
VLATVISLP	9	Unmodified	_VLATVISLP_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7932434082031	2	456.791861	911.569169	-0.077665	-3.5477E-05	3.236	0.0014782	3.1584	0.0014427	456.79322700683537	35.356	1.7647	35.603	35.091	36.856	0.24769					159	44	4	0	0	0	0.76996	1	2721	2721		33.516	0	1	6766600	+		62333	18527	41490	41506	70671	70671					0.10984716596760791
VLATVPLLG	9	Unmodified	_VLATVPLLG_					0	0	0		ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7872619628906	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.7932	1	3704	3704		19.36	0	1	539980			62334	6271	41491	41507	70672	70672					0.11308733942337312
VLATVPLLG	9	Unmodified	_VLATVPLLG_					0	0	0		ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.78790283203125	2	441.786579	881.558604	-0.54459	-0.00024059	3.5319	0.0015603	2.9873	0.0013197	441.7881167581505	37.981	2.8453	38.294	37.083	39.929	0.31312					193	69	5	0	0	0	0.7932	2	3176	3151;3176		26.796	0	1	61531000			62335	6271	41491	41507	70673;70674	70674					0.11308733942337312
VLATVPLLG	9	Unmodified	_VLATVPLLG_					0	0	0		ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7878723144531	2	441.786579	881.558604	-1.9285	-0.000852	4.2074	0.0018588	2.2789	0.0010068	441.7883020673081	40.132	1.5961	40.5	39.175	40.772	0.36797					93	38	3	0	0	0	0.7932	1	3279	3279		19.36	0	1	4170800			62336	6271	41491	41507	70675	70675					0.11308733942337312
VLATVPLLG	9	Unmodified	_VLATVPLLG_					0	0	0		ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7880859375	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.7932	1	3139	3139		19.36	0	1	54520000			62337	6271	41491	41507	70676	70676					0.11308733942337312
VLATVQGR	8	Unmodified	_VLATVQGR_					0	0	0			REV__nc|ENSG00000107949|Q9P287-2|BCCIP	REV__nc|ENSG00000107949|Q9P287-2|BCCIP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.7515869140625	2	422.255977	842.497401	-1.5326	-0.00064716	-0.92649	-0.00039122	-2.4591	-0.0010384	422.2536803858794	77.761	2.0959	77.853	77.648	79.744	0.091438					111	71	2	0	0	0	0.4196	1	7271	7271		24.203	11.996	1	122600	+		62338	29768	41492	41508	70677	70677					0.06985221962906962
VLATVQGR	8	Unmodified	_VLATVQGR_					0	0	0			REV__nc|ENSG00000107949|Q9P287-2|BCCIP	REV__nc|ENSG00000107949|Q9P287-2|BCCIP	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	422.255977	842.497401	-0.18703	-7.8973E-05	-6.0697	-0.002563	-6.2567	-0.0026419	422.2532235768292	78.183	1.8429	78.239	78.044	79.887	0.056114	0.19318	-0.00036318	NaN	24.203	76	56	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125270	+		62339	29768	41492	41508							0.06985221962906962
VLAVEGLVL	9	Unmodified	_VLAVEGLVL_					0	0	0		ENST00000484147.5_1_1:114397100-114397559:-|nuORF	ENST00000484147.5_1_1:114397100-114397559:-|nuORF	ENST00000484147.5_1_1:114397100-114397559:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79156494140625	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.7932	1	3751	3751		24.203	4.8428	1	652510			62340	12529	41493	41509	70678	70678					0.10984716596760791
VLAVEGLVL	9	Unmodified	_VLAVEGLVL_					0	0	0		ENST00000484147.5_1_1:114397100-114397559:-|nuORF	ENST00000484147.5_1_1:114397100-114397559:-|nuORF	ENST00000484147.5_1_1:114397100-114397559:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7929992675781	2	456.791861	911.569169	-1.2499	-0.00057095	4.1632	0.0019017	2.9133	0.0013308	456.7936353244547	38.958	1.5745	38.969	38.104	39.679	0.010708					113	44	4	0	0	0	0.7932	1	2329	2329		19.36	0	1	1834900			62341	12529	41493	41509	70679	70679					0.10984716596760791
VLAVGKPE	8	Unmodified	_VLAVGKPE_					0	0	0		ENST00000262741.9_2_1:46597677-46597770:-|nuORF	ENST00000262741.9_2_1:46597677-46597770:-|nuORF	ENST00000262741.9_2_1:46597677-46597770:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.25714111328125	2	406.747453	811.480354	0.01737	7.0654E-06	0.73165	0.0002976	0.74903	0.00030466	406.7473283055621	33.358	0.083382	33.312	33.249	33.332	-0.045815					5	3	2	0	0	0	0.4196	1	1609	1609		31.955	5.1588	1	13937			62342	9446	41494	41510	70680	70680					0.06707301357084816
VLAVGPVLG	9	Unmodified	_VLAVGPVLG_					0	0	0		ENST00000252032.9_1_20:3232633-3232870:-|nuORF	ENST00000252032.9_1_20:3232633-3232870:-|nuORF	ENST00000252032.9_1_20:3232633-3232870:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7669982910156	2	412.765646	823.516739	-0.024773	-1.0226E-05	2.7576	0.0011383	2.7329	0.001128	412.7671753724154	37.892	4.8812	37.868	35.596	40.477	-0.023979					267	113	4	0	0	0	0.7932	1	2464	2464		21.702	6.0661	1	1546000			62343	9305	41495	41511	70681	70681					0.0979217825380374
VLAVGPVLG	9	Unmodified	_VLAVGPVLG_					0	0	0		ENST00000252032.9_1_20:3232633-3232870:-|nuORF	ENST00000252032.9_1_20:3232633-3232870:-|nuORF	ENST00000252032.9_1_20:3232633-3232870:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76605224609375	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.29	1	40.371	39.871	40.871	0.081345								0	0	0	0.2792	1	2544	2544		39.021	9.18	1				62344	9305	41495	41511	70682	70682					0.0979217825380374
VLAVLAPVG	9	Unmodified	_VLAVLAPVG_					0	0	0			REV__ENST00000495096.5_1_22:19958242-19966598:-|nuORF	REV__ENST00000495096.5_1_22:19958242-19966598:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.7745666503906	2	419.773471	837.53239	1.4805	0.00062149	1.6552	0.00069481	3.1358	0.0013163	419.7740764844297	42.58	3.4026	42.58	41.789	45.191	0.00017166					207	81	4	0	0	0	0.72098	1	3129	3129		39.021	0	1	10266000	+		62345	17113	41496	41512	70683	70683					0.10712464770858787
VLAVLAPVG	9	Unmodified	_VLAVLAPVG_					0	0	0			REV__ENST00000495096.5_1_22:19958242-19966598:-|nuORF	REV__ENST00000495096.5_1_22:19958242-19966598:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7738342285156	2	419.773471	837.53239	0.26515	0.0001113	4.2105	0.0017675	4.4757	0.0018788	419.7748900327774	48.621	1.0597	48.659	48.328	49.387	0.037731					37	25	2	0	0	0	0.7932	1	3723	3723		21.702	0	1	57782	+		62346	17113	41496	41512	70684	70684					0.10712464770858787
VLAVLAVNL	9	Unmodified	_VLAVLAVNL_					0	0	0			REV__ENSG00000164040|ENST00000296425|PGRMC2	REV__ENSG00000164040|ENST00000296425|PGRMC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30023193359375	2	456.299853	910.585153	0.11124	5.0758E-05	2.4046	0.0010972	2.5159	0.001148	456.3008660757633	48.327	3.035	48.325	47.755	50.79	-0.002449					136	76	2	0	0	0	0.69914	1	4087	4087		40.573	5.3719	1	254750	+		62347	21013	41497	41513	70685	70685					0.1262842283365444
VLAVLAVNL	9	Unmodified	_VLAVLAVNL_					0	0	0			REV__ENSG00000164040|ENST00000296425|PGRMC2	REV__ENSG00000164040|ENST00000296425|PGRMC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30023193359375	2	456.299853	910.585153	-1.2401	-0.00056585	4.009	0.0018293	2.7689	0.0012635	456.30156916683757	47.995	1.2721	48.018	47.652	48.924	0.02227					72	35	3	0	0	0	0.77546	1	3651	3651		31.955	4.0726	1	212280	+		62348	21013	41497	41513	70686	70686					0.1262842283365444
VLAVLILI	8	Unmodified	_VLAVLILI_					0	0	0		nc|ENSG00000113749|P25021|HRH2;nc|ENSG00000113749|P25021-2|HRH2;ENSG00000113749|ENST00000636584|HRH2	nc|ENSG00000113749|P25021|HRH2	nc|ENSG00000113749|P25021|HRH2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	427.302734375	2	427.30969	852.604826	1.3371	0.00057137	3.6891	0.0015764	5.0262	0.0021478	427.31139012494407	68.123	0.14714	68.153	68.05	68.197	0.030571					7	4	2	0	0	0	0.4196	1	6486	6486		10.185	0	1	46012			62349	2742	41498	41514	70687	70687					0.1726279884444466
VLAVLILI	8	Unmodified	_VLAVLILI_					0	0	0		nc|ENSG00000113749|P25021|HRH2;nc|ENSG00000113749|P25021-2|HRH2;ENSG00000113749|ENST00000636584|HRH2	nc|ENSG00000113749|P25021|HRH2	nc|ENSG00000113749|P25021|HRH2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	427.30969	852.604826	-0.18199	-7.7766E-05	10.719	0.0045803	10.537	0.0045025	427.3138923614271	68.104	0.40977	68.126	67.872	68.282	0.021599	-0.037555	0.0030323	NaN	10.185	22	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80299			62350	2742	41498	41514							0.1726279884444466
VLAVLILI	8	Unmodified	_VLAVLILI_					0	0	0		nc|ENSG00000113749|P25021|HRH2;nc|ENSG00000113749|P25021-2|HRH2;ENSG00000113749|ENST00000636584|HRH2	nc|ENSG00000113749|P25021|HRH2	nc|ENSG00000113749|P25021|HRH2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	427.30969	852.604826	-1.1493	-0.00049109	8.0672	0.0034472	6.918	0.0029561	427.312795785213	68.151	0.083282	68.21	68.147	68.231	0.05928	0.047394	0.00076609	NaN	10.185	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29851			62351	2742	41498	41514							0.1726279884444466
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.77978515625	2	434.778754	867.542954	-1.8615	-0.00080934	4.2133	0.0018318	2.3518	0.0010225	434.7804412792906	41.189	2.173	41.189	40.506	42.679	0					202	63	4	0	0	0	0.67235	6	2905	2857;2881;2893;2905;2916;2939		42.474	7.2737	1	2581600	+		62352	22573	41499	41515	70688;70689;70690;70691;70692;70693	70691					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	434.7796630859375	2	434.778754	867.542954	-1.8344	-0.00079754	4.3253	0.0018805	2.4909	0.001083	434.7805085345101	43.07	1.706	43.07	42.535	44.241	0					126	41	4	0	0	0	0.76402	5	3149	3002;3105;3149;3161;3173		35.201	0	1	2514600	+		62353	22573	41499	41515	70694;70695;70696;70697;70698	70696					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7802429199219	2	434.778754	867.542954	-0.10471	-4.5526E-05	3.4241	0.0014887	3.3194	0.0014432	434.7801797688748	34.455	0.9535	34.45	33.903	34.857	-0.0047417					93	22	5	0	0	0	0.76996	3	2047	2047;2097;2118		33.516	3.0119	1	2846000	+		62354	22573	41499	41515	70699;70700;70701	70699					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	2	434.778754	867.542954	-0.14252	-6.1964E-05	3.501	0.0015222	3.3585	0.0014602	434.78017454908985	35.066	1.262	35.054	34.849	36.111	-0.012203					110	29	4	0	0	0	0.76402	1	2172	2172		35.201	0	1	2804500	+		62355	22573	41499	41515	70702	70702					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	2	434.778754	867.542954	-0.046956	-2.0415E-05	3.4342	0.0014931	3.3872	0.0014727	434.78015188603155	37.115	1.8981	37.091	36.1	37.998	-0.023975					141	42	5	0	0	0	0.76402	3	2385	2385;2433;2538		35.201	1.5607	1	3714500	+		62356	22573	41499	41515	70703;70704;70705	70703					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	2	434.778754	867.542954	0.048931	2.1274E-05	3.263	0.0014187	3.312	0.00144	434.780055906595	38.381	1.4097	38.353	37.994	39.403	-0.027843					122	32	4	0	0	0	0.76402	1	2665	2665		35.201	0	1	2404700	+		62357	22573	41499	41515	70706	70706					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	2	434.778754	867.542954	0.13644	5.932E-05	2.2845	0.00099327	2.421	0.0010526	434.77963633612353	39.861	1.5425	39.83	39.322	40.865	-0.03027					156	40	5	0	0	0	0.67235	4	2795	2748;2760;2795;2807		42.474	5.3592	1	4621500	+		62358	22573	41499	41515	70707;70708;70709;70710	70709					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7798156738281	2	434.778754	867.542954	0.22737	9.8856E-05	2.0963	0.00091142	2.3236	0.0010103	434.77953814220416	41.519	1.9788	41.488	40.771	42.75	-0.030991					159	51	4	0	0	0	0.76402	4	3127	3127;3163;3197;3217		35.201	2.8053	1	2938700	+		62359	22573	41499	41515	70711;70712;70713;70714	70711					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77960205078125	2	434.778754	867.542954	0.20501	8.9135E-05	2.1081	0.00091654	2.3131	0.0010057	434.77952396468385	43.343	2.099	43.316	42.291	44.39	-0.026768					151	50	4	0	0	0	0.64338	3	3402	3241;3324;3402		44.531	9.3304	1	2133200	+		62360	22573	41499	41515	70715;70716;70717	70717					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77978515625	2	434.778754	867.542954	0.14274	6.2059E-05	2.5101	0.0010913	2.6528	0.0011534	434.7797060849824	45.222	2.0394	45.204	44.102	46.141	-0.018585					145	47	4	0	0	0	0.76402	4	3497	3485;3497;3557;3569		35.201	0	1	1294000	+		62361	22573	41499	41515	70718;70719;70720;70721	70719					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7793273925781	2	434.778754	867.542954	0.084764	3.6853E-05	2.5336	0.0011015	2.6183	0.0011384	434.7797264023558	46.593	1.7541	46.579	45.911	47.665	-0.013821					147	47	4	0	0	0	0.67235	5	3696	3660;3696;3708;3769;3844		42.474	5.2613	1	2017500	+		62362	22573	41499	41515	70722;70723;70724;70725;70726	70723					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7796325683594	2	434.778754	867.542954	0.023581	1.0252E-05	2.6379	0.0011469	2.6615	0.0011571	434.7797629333649	48.108	2.6391	48.098	47.574	50.213	-0.0093269					205	68	4	0	0	0	0.67235	4	3950	3950;3961;3973;4022		42.474	1.5607	1	2315200	+		62363	22573	41499	41515	70727;70728;70729;70730	70727					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77984619140625	2	434.778754	867.542954	-0.097946	-4.2585E-05	2.9953	0.0013023	2.8973	0.0012597	434.7799034741548	53.402	2.1549	53.397	52.578	54.733	-0.0053673					128	65	3	0	0	0	0.7932	1	4796	4796		18.324	0	1	357680	+		62364	22573	41499	41515	70731	70731					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7794189453125	2	434.778754	867.542954	-0.16796	-7.3028E-05	3.3828	0.0014708	3.2148	0.0013977	434.78011337884044	65.512	0.46893	65.517	65.24	65.709	0.0046997					46	24	2	0	0	0	0.7932	1	6174	6174		25.45	1.2474	1	145440	+		62365	22573	41499	41515	70732	70732					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77911376953125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.797	1	54.789	54.289	55.289	-0.0077095								0	0	0	0.33301	1	4848	4848		19.36	0	1		+		62366	22573	41499	41515	70733	70733					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77960205078125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.126	1	58.112	57.612	58.612	-0.013641								0	0	0	0.28877	1	5281	5281		35.201	1.6851	1		+		62367	22573	41499	41515	70734	70734					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.78125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.585	1	66.596	66.096	67.096	0.010452								0	0	0	0.31472	1	6242	6242		25.45	1.2474	1		+		62368	22573	41499	41515	70735	70735					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7801513671875	2	434.778754	867.542954	-0.72462	-0.00031505	3.8898	0.0016912	3.1652	0.0013761	434.78037611122505	35.149	1.2526	35.093	34.81	36.063	-0.056381					100	28	4	0	0	0	0.69914	4	2273	2263;2273;2297;2308		40.573	3.7006	1	2671400	+		62369	22573	41499	41515	70736;70737;70738;70739	70737					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78021240234375	2	434.778754	867.542954	-0.97237	-0.00042277	4.234	0.0018408	3.2616	0.0014181	434.7805193577322	37.104	1.6925	37.05	36.066	37.758	-0.053555					155	37	5	0	0	0	0.76996	3	2524	2524;2572;2598		33.516	0	1	5510500	+		62370	22573	41499	41515	70740;70741;70742	70740					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.78021240234375	2	434.778754	867.542954	-1.3516	-0.00058764	3.9223	0.0017053	2.5707	0.0011177	434.78034506978366	39.667	1.8641	39.623	39.121	40.985	-0.043697					176	46	5	0	0	0	0.67235	4	2833	2833;2845;2882;2998		42.474	7.2737	1	3943300	+		62371	22573	41499	41515	70743;70744;70745;70746	70743					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796936035156	2	434.778754	867.542954	-1.2494	-0.00054321	3.5325	0.0015359	2.2831	0.00099266	434.7801616022163	41.477	1.7868	41.436	40.922	42.709	-0.04081					147	45	4	0	0	0	0.76402	2	3200	3200;3293		35.201	0	1	2800900	+		62372	22573	41499	41515	70747;70748	70747					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796630859375	2	434.778754	867.542954	-1.1228	-0.00048815	3.4102	0.0014827	2.2874	0.00099453	434.7801032015678	43.351	2.0206	43.315	42.595	44.616	-0.035816					155	47	4	0	0	0	0.76402	1	3329	3329		35.201	0	1	2016300	+		62373	22573	41499	41515	70749	70749					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77899169921875	2	434.778754	867.542954	-1.003	-0.00043608	3.6101	0.0015696	2.6071	0.0011335	434.7801973515074	45.237	1.8216	45.206	44.189	46.01	-0.031067					113	41	4	0	0	0	0.67235	6	3742	3526;3551;3575;3599;3610;3742		42.474	7.2737	1	1431800	+		62374	22573	41499	41515	70750;70751;70752;70753;70754;70755	70755					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7796936035156	2	434.778754	867.542954	-0.89055	-0.00038719	3.5223	0.0015314	2.6317	0.0011442	434.78015148379285	46.623	1.9369	46.594	45.67	47.607	-0.028782					145	50	4	0	0	0	0.76402	3	3895	3895;3964;3972		35.201	0	1	2468400	+		62375	22573	41499	41515	70756;70757;70758	70756					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7797546386719	2	434.778754	867.542954	-0.81007	-0.0003522	3.4341	0.0014931	2.624	0.0011409	434.7801064754335	48.077	2.7534	48.052	47.541	50.295	-0.025112					179	68	4	0	0	0	0.64338	2	4122	4110;4122		44.531	9.3304	1	1940000	+		62376	22573	41499	41515	70759;70760	70760					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7794494628906	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.242	1	58.212	57.712	58.712	-0.029865								0	0	0	0.29299	1	5407	5407		33.516	5.2613	1		+		62377	22573	41499	41515	70761	70761					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.78021240234375	2	434.778754	867.542954	1.0211	0.00044394	2.4757	0.0010764	3.4967	0.0015203	434.77962104590523	33.405	1.0416	33.404	32.826	33.868	-0.0016365					60	24	3	0	0	0	0.78851	1	1965	1965		28.254	1.4582	1	347080	+		62378	22573	41499	41515	70762	70762					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801818847656	2	434.778754	867.542954	0.69522	0.00030227	2.4412	0.0010614	3.1364	0.0013637	434.77975301030995	34.433	2.2792	34.435	33.833	36.112	0.0026016					147	52	5	0	0	0	0.67235	4	2119	2119;2148;2221;2257		42.474	7.2737	1	3951300	+		62379	22573	41499	41515	70763;70764;70765;70766	70763					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7800598144531	2	434.778754	867.542954	0.15311	6.6568E-05	3.0229	0.0013143	3.176	0.0013809	434.7799826029187	37.007	1.7817	37.018	36.075	37.857	0.011173					164	39	5	0	0	0	0.67235	6	2365	2342;2365;2377;2400;2472;2496		42.474	0	1	5259900	+		62380	22573	41499	41515	70767;70768;70769;70770;70771;70772	70768					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7801208496094	2	434.778754	867.542954	0.085891	3.7343E-05	2.526	0.0010983	2.6119	0.0011356	434.77973178522114	39.697	1.6335	39.706	39.141	40.774	0.0092812					137	39	4	0	0	0	0.67235	2	2803	2778;2803		42.474	5.446	1	4100400	+		62381	22573	41499	41515	70773;70774	70774					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77947998046875	2	434.778754	867.542954	0.42447	0.00018455	1.8034	0.00078407	2.2279	0.00096862	434.7793985778856	41.629	2.1296	41.632	40.681	42.811	0.003418					179	54	4	0	0	0	0.67235	4	3225	3003;3157;3216;3225		42.474	6.3009	1	2766200	+		62382	22573	41499	41515	70775;70776;70777;70778	70778					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.77972412109375	2	434.778754	867.542954	0.7674	0.00033365	1.4443	0.00062795	2.2117	0.00096159	434.77924032695546	43.43	1.9411	43.428	42.721	44.662	-0.0020828					145	46	4	0	0	0	0.76402	3	3400	3320;3400;3421		35.201	1.6851	1	2165200	+		62383	22573	41499	41515	70779;70780;70781	70780					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7797546386719	2	434.778754	867.542954	1.0906	0.00047416	1.4824	0.00064451	2.573	0.0011187	434.77927379886756	45.133	1.9101	45.129	44.288	46.198	-0.0041618					129	44	4	0	0	0	0.69914	4	3535	3535;3583;3631;3688		40.573	0	1	1333000	+		62384	22573	41499	41515	70782;70783;70784;70785	70782					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7796630859375	2	434.778754	867.542954	1.4259	0.00061996	1.2428	0.00054033	2.6687	0.0011603	434.77914222325165	48.361	3.1365	48.359	47.675	50.811	-0.002449					227	81	4	0	0	0	0.67235	2	3982	3982;4090		42.474	0	1	1803700	+		62385	22573	41499	41515	70786;70787	70786					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7789001464844	2	434.778754	867.542954	0.53992	0.00023475	2.3715	0.0010311	2.9115	0.0012658	434.7797051939565	61.718	1.0878	61.748	61.435	62.522	0.029575					82	49	2	0	0	0	0.7932	1	5815	5815		25.45	0	1	224940	+		62386	22573	41499	41515	70788	70788					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7784423828125	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.286	1	66.314	65.814	66.814	0.028175								0	0	0	0.29299	1	6271	6271		33.516	6.7195	1		+		62387	22573	41499	41515	70789	70789					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77947998046875	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.67235	3	2689	2689;2756;2882		42.474	1.9018	1	2524800	+		62388	22573	41499	41515	70790;70791;70792	70790					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7796630859375	2	434.778754	867.542954	-1.6369	-0.00071169	4.2666	0.001855	2.6297	0.0011433	434.7804825082367	43.238	1.5673	43.244	42.525	44.093	0.0057526					133	41	4	0	0	0	0.7932	2	3083	3060;3083		26.796	0	1	2391100	+		62389	22573	41499	41515	70793;70794	70794					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.779541015625	2	434.778754	867.542954	-1.6334	-0.00071017	4.4757	0.0019459	2.8423	0.0012358	434.7805577806796	45.068	1.8313	45.08	44.099	45.93	0.012058					138	45	4	0	0	0	0.7932	1	3117	3117		26.796	0	1	1177900	+		62390	22573	41499	41515	70795	70795					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.780029296875	2	434.778754	867.542954	-1.6308	-0.00070902	4.4814	0.0019484	2.8506	0.0012394	434.7805685109069	46.403	1.6228	46.419	45.791	47.413	0.015514					145	46	4	0	0	0	0.67235	2	3439	3439;3522		42.474	7.2737	1	2364100	+		62391	22573	41499	41515	70796;70797	70796					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.7799987792969	2	434.778754	867.542954	-1.6274	-0.00070758	4.3418	0.0018877	2.7144	0.0011802	434.7804933864823	48.089	2.9288	48.112	47.382	50.311	0.02227					175	79	4	0	0	0	0.67235	3	3704	3633;3686;3704		42.474	0	1	1959200	+		62392	22573	41499	41515	70798;70799;70800	70800					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7806396484375	2	434.778754	867.542954	0.12745	5.5413E-05	3.4254	0.0014893	3.5528	0.0015447	434.7800727481765	33.235	0.77096	33.345	33.052	33.823	0.10991					78	32	3	0	0	0	0.7932	1	1607	1607		26.796	0	1	320750	+		62393	22573	41499	41515	70801	70801					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801513671875	2	434.778754	867.542954	0.13638	5.9295E-05	3.2501	0.0014131	3.3864	0.0014724	434.7800361226264	34.243	0.88012	34.352	33.821	34.701	0.10829					118	39	4	0	0	0	0.7932	1	1752	1752		25.45	0	1	2838300	+		62394	22573	41499	41515	70802	70802					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7802734375	2	434.778754	867.542954	0.1588	6.9043E-05	3.2094	0.0013954	3.3682	0.0014644	434.7800358037927	36.918	1.7583	37.017	35.947	37.706	0.099274					183	53	4	0	0	0	0.69914	4	2164	1959;1968;2088;2164		40.573	3.4135	1	4737100	+		62395	22573	41499	41515	70803;70804;70805;70806	70806					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7801818847656	2	434.778754	867.542954	0.17139	7.4517E-05	3.201	0.0013917	3.3724	0.0014663	434.7800235008866	37.854	1.477	37.948	37.639	39.116	0.094318					162	48	4	0	0	0	0.76402	2	2256	2256;2298		35.201	0	1	2203700	+		62396	22573	41499	41515	70807;70808	70807					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7803955078125	2	434.778754	867.542954	0.18498	8.0427E-05	2.9584	0.0012863	3.1434	0.0013667	434.7799222967292	39.501	1.6389	39.589	38.953	40.592	0.088375					151	45	4	0	0	0	0.67235	1	2359	2359		42.474	5.446	1	4736600	+		62397	22573	41499	41515	70809	70809					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77972412109375	2	434.778754	867.542954	0.20025	8.7063E-05	2.2598	0.0009825	2.46	0.0010696	434.7796001041291	41.169	2.0161	41.243	40.516	42.532	0.073414					209	61	4	0	0	0	0.67235	6	2757	2757;2803;2815;2825;2833;2841		42.474	7.2737	1	2513700	+		62398	22573	41499	41515	70810;70811;70812;70813;70814;70815	70810					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7798767089844	2	434.778754	867.542954	0.23293	0.00010127	2.5993	0.0011301	2.8322	0.0012314	434.77975926607803	45.012	1.9207	45.061	44.045	45.966	0.048996					151	47	4	0	0	0	0.76402	5	3266	3129;3173;3231;3266;3298		35.201	5.1588	1	1327200	+		62399	22573	41499	41515	70816;70817;70818;70819;70820	70819					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.77899169921875	2	434.778754	867.542954	0.24708	0.00010743	2.5603	0.0011131	2.8073	0.0012206	434.77973808530567	46.429	1.8598	46.467	45.771	47.631	0.038185					151	52	4	0	0	0	0.76402	1	3338	3338		35.201	0	1	2750200	+		62400	22573	41499	41515	70821	70821					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	434.7800598144531	2	434.778754	867.542954	0.26233	0.00011406	2.542	0.0011052	2.8044	0.0012193	434.7797396749612	48.307	1.7683	48.345	47.314	49.083	0.037731					151	52	4	0	0	0	0.76402	4	3621	3621;3691;3720;3744		35.201	0	1	1986600	+		62401	22573	41499	41515	70822;70823;70824;70825	70822					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77734375	2	434.778754	867.542954	0.05867	2.5508E-05	3.3476	0.0014555	3.4063	0.001481	434.78006642384975	34.89	1.3055	34.835	34.634	35.939	-0.055149					165	48	4	0	0	0	0.7932	1	1938	1938		24.203	0	1	2158200	+		62402	22573	41499	41515	70826	70826					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.780029296875	2	434.778754	867.542954	-0.0078888	-3.4299E-06	3.3592	0.0014605	3.3513	0.0014571	434.78010887243397	37.016	1.7367	36.955	35.934	37.671	-0.060333					147	50	4	0	0	0	0.76402	4	2037	2037;2067;2098;2148		35.201	0	1	4750000	+		62403	22573	41499	41515	70827;70828;70829;70830	70827					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801513671875	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.76402	2	2241	2241;2287		35.201	0	1	2486400	+		62404	22573	41499	41515	70831;70832	70831					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801818847656	2	434.778754	867.542954	-0.10818	-4.7034E-05	3.1846	0.0013846	3.0765	0.0013376	434.7800213108271	39.594	1.7303	39.546	38.941	40.672	-0.04789					162	53	5	0	0	0	0.76402	3	2440	2379;2440;2452		35.201	5.3592	1	5065300	+		62405	22573	41499	41515	70833;70834;70835	70834					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7795715332031	2	434.778754	867.542954	-0.16679	-7.2519E-05	2.5779	0.0011208	2.4111	0.0010483	434.7797430722576	41.229	2.154	41.184	40.422	42.576	-0.045467					206	68	4	0	0	0	0.49378	5	2828	2738;2819;2828;2855;2864		52.299	17.098	1	2793300	+		62406	22573	41499	41515	70836;70837;70838;70839;70840	70838					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7797546386719	2	434.778754	867.542954	-0.23402	-0.00010175	2.835	0.0012326	2.601	0.0011308	434.77987896985167	43.157	1.7547	43.107	42.38	44.135	-0.050308					136	44	4	0	0	0	0.7932	1	2916	2916		26.796	0	1	2479900	+		62407	22573	41499	41515	70841	70841					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77996826171875	2	434.778754	867.542954	-0.29603	-0.00012871	3.1388	0.0013647	2.8428	0.001236	434.77998100939635	44.91	1.6932	44.842	44.077	45.77	-0.068634					139	41	4	0	0	0	0.76402	5	3201	3112;3201;3260;3271;3290		35.201	0	1	1190800	+		62408	22573	41499	41515	70842;70843;70844;70845;70846	70843					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.77899169921875	2	434.778754	867.542954	-0.35228	-0.00015317	3.1012	0.0013483	2.7489	0.0011952	434.779978308334	46.439	1.7725	46.36	45.68	47.452	-0.079006					156	51	4	0	0	0	0.76402	2	3534	3371;3534		35.201	0	1	2833200	+		62409	22573	41499	41515	70847;70848	70848					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7798767089844	2	434.778754	867.542954	-0.41033	-0.0001784	3.2635	0.0014189	2.8532	0.0012405	434.7800469009233	48.206	1.648	48.113	47.337	48.985	-0.093178					139	44	4	0	0	0	0.76402	2	3635	3635;3668		35.201	0	1	2175000	+		62410	22573	41499	41515	70849;70850	70849					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.78045654296875	2	434.778754	867.542954	-0.61408	-0.00026699	3.3286	0.0014472	2.7146	0.0011802	434.78015323105376	52.924	3.3917	52.849	52.471	55.862	-0.074512					147	100	2	0	0	0	0.7932	1	4440	4440		26.796	0	1	526750	+		62411	22573	41499	41515	70851	70851					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7803649902344	2	434.778754	867.542954	-0.89312	-0.00038831	3.6526	0.0015881	2.7595	0.0011998	434.7802679041939	61.693	0.95562	61.709	61.315	62.27	0.015724					65	41	2	0	0	0	0.7932	1	5392	5392		26.796	0	1	303610	+		62412	22573	41499	41515	70852	70852					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77972412109375	2	434.778754	867.542954	-0.30995	-0.00013476	4.1464	0.0018027	3.8364	0.001668	434.78044491218617	37.836	1.2567	38.149	37.864	39.121	0.31312					114	31	4	0	0	0	0.7932	1	3196	3196		26.796	0	1	8178800	+		62413	22573	41499	41515	70853	70853					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7802429199219	2	434.778754	867.542954	-1.9965	-0.00086806	3.819	0.0016604	1.8224	0.00079234	434.780321192834	40.471	2.2993	40.864	39.116	41.415	0.39209					118	58	4	0	0	0	0.64338	2	3220	3220;3230		44.531	9.3304	1	17256000	+		62414	22573	41499	41515	70854;70855	70854					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.7795715332031	2	434.778754	867.542954	-2.1097	-0.00091725	4.2782	0.0018601	2.1685	0.00094281	434.7804806233305	41.913	2.0042	42.327	41.437	43.441	0.4139					161	51	4	0	0	0	0.7932	1	3855	3855		25.45	0	1	6567600	+		62415	22573	41499	41515	70856	70856					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78009033203125	2	434.778754	867.542954	0.24981	0.00010861	3.5134	0.0015276	3.7632	0.0016362	434.78017285768743	37.739	1.2173	38.259	37.943	39.16	0.51989					114	30	4	0	0	0	0.76996	1	3158	3158		33.516	5.2613	1	8689200	+		62416	22573	41499	41515	70857	70857					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78009033203125	2	434.778754	867.542954	-1.1198	-0.00048687	3.1724	0.0013793	2.0526	0.00089244	434.78000279272624	40.392	2.3001	40.981	39.188	41.488	0.58915					167	57	3	0	0	0	0.76402	2	3262	3262;3309		35.201	8.4046	1	15771000	+		62417	22573	41499	41515	70858;70859	70858					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7785339355469	2	434.778754	867.542954	-1.3642	-0.00059311	3.6758	0.0015982	2.3117	0.0010051	434.78022433314106	41.76	1.9815	42.394	41.461	43.442	0.6339					166	51	4	0	0	0	0.76402	1	3597	3597		35.201	8.4046	1	6824500	+		62418	22573	41499	41515	70860	70860					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7778625488281	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.493	1	61.046	60.546	61.546	0.55323								0	0	0	0.30672	1	6438	6438		28.254	1.4582	1		+		62419	22573	41499	41515	70861	70861					0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	434.778754	867.542954	-1.7605	-0.00076543	4.5918	0.0019964	2.8313	0.001231	434.7806325638865	48.314	1.8504	48.314	47.504	49.354	0	0.11538	0.0012823	NaN	44.531	160	54	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1743700	+		62420	22573	41499	41515							0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	434.778754	867.542954	-0.16796	-7.3028E-05	3.3828	0.0014708	3.2148	0.0013977	434.78011337884044	65.512	0.46893	65.517	65.24	65.709	0.0046997	-0.0056033	0.00076724	NaN	25.45	46	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	145440	+		62421	22573	41499	41515							0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	434.778754	867.542954	0.75491	0.00032822	1.8462	0.0008027	2.6011	0.0011309	434.7796116594318	65.347	0.23282	65.375	65.246	65.478	0.027321	-0.14821	-0.00056888	NaN	25.45	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	160350	+		62422	22573	41499	41515							0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	434.778754	867.542954	0.41535	0.00018059	2.5227	0.0010968	2.938	0.0012774	434.77979122883426	65.348	0.87663	65.473	64.719	65.596	0.12532	-0.04938	1.9318E-05	NaN	25.45	57	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	239760	+		62423	22573	41499	41515							0.10388447425293634
VLAVSLPVA	9	Unmodified	_VLAVSLPVA_					0	0	0			REV__ENSG00000183087|ENST00000327773|GAS6	REV__ENSG00000183087|ENST00000327773|GAS6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	434.778754	867.542954	-0.21502	-9.3487E-05	3.0111	0.0013092	2.7961	0.0012157	434.7800125926101	65.34	0.58316	65.726	65.234	65.817	0.38614	0.2032	0.00044406	NaN	25.45	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133180	+		62424	22573	41499	41515							0.10388447425293634
VLAWRPGLA	9	Unmodified	_VLAWRPGLA_					0	0	0			REV__ENSG00000174165|ENST00000310442|ZDHHC24	REV__ENSG00000174165|ENST00000310442|ZDHHC24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7951965332031	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.7932	1	3923	3923		25.45	1.2474	1	1219600	+		62425	21977	41500	41516	70862	70862					0.08446074267988024
VLAWRPGLA	9	Unmodified	_VLAWRPGLA_					0	0	0			REV__ENSG00000174165|ENST00000310442|ZDHHC24	REV__ENSG00000174165|ENST00000310442|ZDHHC24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7974853515625	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.7932	1	4703	4703		24.203	2.5004	1	2075300	+		62426	21977	41500	41516	70863	70863					0.08446074267988024
VLAWRPGLA	9	Unmodified	_VLAWRPGLA_					0	0	0			REV__ENSG00000174165|ENST00000310442|ZDHHC24	REV__ENSG00000174165|ENST00000310442|ZDHHC24	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79583740234375	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.7932	1	4077	4077		19.36	0	1	412030	+		62427	21977	41500	41516	70864	70864					0.08446074267988024
VLCGLVRF	8	Unmodified	_VLCGLVRF_					0	0	0			REV__nc|ENSG00000165917|Q13702-2|RAPSN	REV__nc|ENSG00000165917|Q13702-2|RAPSN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.7761535644531	2	453.765123	905.515694	-1.3491	-0.00061217	3.1643	0.0014359	1.8152	0.0008237	453.7663343542523	44.902	1.0958	45.365	44.945	46.041	0.46313					29	26	2	0	0	0	0.4196	1	4229	4229		15.636	0	1	230590	+		62428	21234	41501	41517	70865	70865					0.059156406132501616
VLCSPPRPHA	10	Unmodified	_VLCSPPRPHA_					0	0	0		ENST00000464111.1_1_7:100283679-100283991:-|nuORF	ENST00000464111.1_1_7:100283679-100283991:-|nuORF	ENST00000464111.1_1_7:100283679-100283991:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.7911376953125	2	538.787118	1075.55968	0.47129	0.00025393	3.7069	0.0019972	4.1782	0.0022512	538.7897027223852	59.807	0.41387	59.924	59.754	60.168	0.11676					19	14	2	0	0	0	0.85934	1	5150	5150		35.618	0.46626	1	131220			62429	12082	41502	41518	70866	70866					0.024926250395765237
VLDFKKDVGL	10	Unmodified	_VLDFKKDVGL_					0	0	0		ENSG00000151240|ENST00000280886|DIP2C	ENSG00000151240|ENST00000280886|DIP2C	ENSG00000151240|ENST00000280886|DIP2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.330078125	2	567.331882	1132.64921	1.2029	0.00068247	-3.4414	-0.0019524	-2.2385	-0.00127	567.3297646264107	90.224	2.877	90.675	88.755	91.632	0.45058					202	72	4	0	0	0	0.8651	1	10754	10754		25.574	1.3713	1	4990000			62430	5103	41503	41519	70867	70867					0.0881915819995811
VLDGFSLMTY	10	Unmodified	_VLDGFSLMTY_					0	0	0		nc|ENSG00000177830|Q9BWS9-3|CHID1;ENSG00000177830|ENST00000323578|CHID1;nc|ENSG00000177830|Q9BWS9-2|CHID1;ENST00000531010.1_1_11:883146-884126:-|nuORF;ENST00000524832.5_1_11:882499-902261:-|nuORF	nc|ENSG00000177830|Q9BWS9-3|CHID1	nc|ENSG00000177830|Q9BWS9-3|CHID1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.2781982421875	2	573.281	1144.54745	0.64457	0.00036952	-3.5854	-0.0020554	-2.9408	-0.0016859	573.2788178941732	80.647	1.4478	80.703	80.315	81.763	0.055916					92	33	5	0	0	0	0.46422	1	8070	8070		58.782	5.8453	1	1928300			62431	7165	41504	41520	70868	70868					-0.01904456214106176
VLDGSVVAA	9	Unmodified	_VLDGSVVAA_					0	0	0			REV__ENST00000405961.3_1_6:39816581-39816617:+|nuORF	REV__ENST00000405961.3_1_6:39816581-39816617:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	415.73492431640625	2	415.734543	829.454533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.137	1	26.242	25.742	26.742	0.1054								0	0	0	0.29103	1	980	980		40.573	1.7665	1		+		62432	26296	41505	41521	70869	70869					0.03298407114800739
VLDKLKNKWWY	11	Unmodified	_VLDKLKNKWWY_					0	0	0		ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000120251|P42262-2|GRIA2	ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2	ENSG00000152578|ENST00000282499|GRIA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.61767578125	3	498.281883	1491.82382	-0.31981	-0.00015936	2.1794	0.0010859	1.8596	0.00092659	498.28281696075425	33.521	0.85828	33.465	33.146	34.004	-0.056385					51	19	4	0	0	0	0.76579	1	2027	2027		18.531	4.445	1	181970			62433	5184;14873	41506	41522	70870	70870					0.09758158345130141
VLDLLAWARPS	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VLDLLAWARPS_					1	0	0			REV__ENST00000502960.1_1_5:140025109-140025175:-|nuORF	REV__ENST00000502960.1_1_5:140025109-140025175:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.3651733398438	2	641.861338	1281.70812	-0.048782	-3.1311E-05	-3.3983	-0.0021813	-3.4471	-0.0022126	642.3608077145252	117.28	0.25537	117.21	117	117.26	-0.07531					22	8	4	0	0	0	0.39037	1	12572	12572		60.118	14.146	1	1765100	+		62434	27832	41507	41523	70871	70871					0.07853634494290418
VLDLLAWARPS	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VLDLLAWARPS_					1	0	0			REV__ENST00000502960.1_1_5:140025109-140025175:-|nuORF	REV__ENST00000502960.1_1_5:140025109-140025175:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	641.861338	1281.70812	2.7033	0.0017351	-6.4183	-0.0041196	-3.715	-0.0023845	642.3589588443936	117.14	0.23871	117.12	117.01	117.25	-0.02433	-0.10706	-0.00067289	NaN	60.118	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98161	+		62435	27832	41507	41523							0.07853634494290418
VLDLLAWARPS	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VLDLLAWARPS_					1	0	0			REV__ENST00000502960.1_1_5:140025109-140025175:-|nuORF	REV__ENST00000502960.1_1_5:140025109-140025175:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	641.861338	1281.70812	2.0953	0.0013449	-6.4	-0.0041079	-4.3047	-0.002763	642.3582767987646	117.29	0.73904	117.27	116.92	117.66	-0.014999	0.051506	-0.00064946	NaN	60.118	59	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45590	+		62436	27832	41507	41523							0.07853634494290418
VLDLLAWARPS	11	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VLDLLAWARPS_					1	0	0			REV__ENST00000502960.1_1_5:140025109-140025175:-|nuORF	REV__ENST00000502960.1_1_5:140025109-140025175:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	641.861338	1281.70812	7.1235	0.0045723	-9.2038	-0.0059076	-2.0803	-0.0013353	641.8548492308335	117.36	0.058487	117.29	117.25	117.31	-0.064972	0.071225	-0.0042488	NaN	60.118	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18838	+		62437	27832	41507	41523							0.07853634494290418
VLDLRGIKNTH	11	Unmodified	_VLDLRGIKNTH_					0	0	0			REV__ENSG00000180113|ENST00000316081|TDRD6	REV__ENSG00000180113|ENST00000316081|TDRD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3673095703125	2	633.369861	1264.72517	1.4675	0.00092945	-2.7221	-0.0017241	-1.2546	-0.00079462	633.3680377897828	95.595	2.6208	95.826	94.161	96.782	0.23103					227	62	4	0	0	0	0.67568	1	9941	9941		40.058	2.55	1	5460600	+		62438	22378	41508	41524	70872	70872					0.1033955510006308
VLDLRGIKNTH	11	Unmodified	_VLDLRGIKNTH_					0	0	0			REV__ENSG00000180113|ENST00000316081|TDRD6	REV__ENSG00000180113|ENST00000316081|TDRD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3689575195312	2	633.369861	1264.72517	2.3091	0.0014625	-3.4627	-0.0021932	-1.1537	-0.00073069	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.66858	3	11713	11713;11760;11772		33.922	9.5793	1	10333000	+		62439	22378	41508	41524	70873;70874;70875	70873					0.1033955510006308
VLDLSAILI	9	Unmodified	_VLDLSAILI_					0	0	0			REV__nc|ENSG00000140199|Q9UHW9-6|SLC12A6	REV__nc|ENSG00000140199|Q9UHW9-6|SLC12A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.3077087402344	2	478.804968	955.595384	-2.1118	-0.0010111	4.0445	0.0019365	1.9327	0.00092538	478.8067215450766	42.623	1.2578	42.623	42.157	43.414	0.00016785					54	29	3	0	0	0	0.7932	1	3206	3206		25.45	1.2474	1	179530	+		62440	19600	41509	41525	70876	70876					0.11580985768239316
VLDLSAILI	9	Unmodified	_VLDLSAILI_					0	0	0			REV__nc|ENSG00000140199|Q9UHW9-6|SLC12A6	REV__nc|ENSG00000140199|Q9UHW9-6|SLC12A6	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8056335449219	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.459	1	38.47	37.97	38.97	0.011604								0	0	0	0.28877	1	2279	2279		35.201	0	1		+		62441	19600	41509	41525	70877	70877					0.11580985768239316
VLDQALRKALD	11	Unmodified	_VLDQALRKALD_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.57928466796875	3	414.578588	1240.71394	0.036477	1.5123E-05	0.75275	0.00031207	0.78923	0.0003272	414.578591354776	28.115	0.58867	28.018	27.752	28.34	-0.096945					31	13	3	0	0	0	0.66858	1	1691	1691		36.528	3.4885	1	255430	+		62442	20278	41510	41526	70878	70878					0.10320733005937655
VLDQALRKALD	11	Unmodified	_VLDQALRKALD_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	414.578588	1240.71394	-2.0539	-0.00085149	2.5385	0.0010524	0.48458	0.0002009	414.57944679488287	28.19	0.67673	28.19	27.927	28.604	0	0.12454	0.0020863	NaN	36.528	64	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136520	+		62443	20278	41510	41526							0.10320733005937655
VLDQALRKALD	11	Unmodified	_VLDQALRKALD_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	414.578588	1240.71394	0.31277	0.00012967	0.030774	1.2758E-05	0.34354	0.00014242	414.5784953570528	28.133	0.45414	28.169	27.96	28.414	0.03607	0.10346	-0.0010326	NaN	36.528	27	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47966	+		62444	20278	41510	41526							0.10320733005937655
VLDQALRKALD	11	Unmodified	_VLDQALRKALD_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	414.578588	1240.71394	-0.35222	-0.00014602	1.0198	0.00042278	0.66756	0.00027675	414.57889501756273	27.942	0.63671	27.904	27.713	28.35	-0.038523	-0.16166	0.00019749	NaN	36.528	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48546	+		62445	20278	41510	41526							0.10320733005937655
VLDQALRKALD	11	Unmodified	_VLDQALRKALD_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	414.578588	1240.71394	2.762	0.0011451	-2.4036	-0.00099649	0.35842	0.0001486	414.577481649611	28.196	0.49473	28.172	27.944	28.439	-0.023556	0.10674	-0.0040603	NaN	36.528	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42757	+		62446	20278	41510	41526							0.10320733005937655
VLDQALRKALD	11	Unmodified	_VLDQALRKALD_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	414.578588	1240.71394	-1.9215	-0.00079662	2.3134	0.00095911	0.39194	0.00016249	414.5793969795258	28.157	0.43781	28.226	28.059	28.496	0.06868	0.16074	0.0018065	NaN	36.528	32	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63830	+		62447	20278	41510	41526							0.10320733005937655
VLDQALRKALD	11	Unmodified	_VLDQALRKALD_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	414.578588	1240.71394	0.075734	3.1398E-05	-0.17383	-7.2065E-05	-0.098094	-4.0668E-05	414.5784257370764	27.81	0.39134	27.921	27.676	28.067	0.11117	-0.14455	-0.001287	NaN	36.528	25	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51545	+		62448	20278	41510	41526							0.10320733005937655
VLDQALRKALD	11	Unmodified	_VLDQALRKALD_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	414.578588	1240.71394	0.2305	9.5559E-05	-0.19518	-8.0917E-05	0.035317	1.4642E-05	414.57821980362553	27.996	0.36389	28.024	27.745	28.109	0.02817	-0.041305	-0.0013136	NaN	36.528	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59223	+		62449	20278	41510	41526							0.10320733005937655
VLDRRVDPS	9	Unmodified	_VLDRRVDPS_					0	0	0		ENST00000520092.5_1_8:71581608-71581740:+|nuORF	ENST00000520092.5_1_8:71581608-71581740:+|nuORF	ENST00000520092.5_1_8:71581608-71581740:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	528.7927856445312	2	528.793455	1055.57236	-0.70681	-0.00037376	0.44833	0.00023708	-0.25848	-0.00013668	528.7935602407883	36.229	1.4862	36.239	35.797	37.283	0.0092773					80	32	4	0	0	0	0.77244	1	2371	2371		32.812	2.3088	1	1332400			62450	13155	41511	41527	70879	70879					0.046793597034593404
VLDTQLVAA	9	Unmodified	_VLDTQLVAA_					0	0	0			REV__ENST00000379370.6_1_1:990440-990599:+|nuORF	REV__ENST00000379370.6_1_1:990440-990599:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2681579589844	2	465.26875	928.522947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.608	1	80.608	80.108	81.108	0								0	0	0	0.30778	1	7446	7446		27.882	2.3082	1		+		62451	25917	41512	41528	70880	70880					0.05582651694658125
VLDTVAILS	9	Unmodified	_VLDTVAILS_					0	0	0		nc|ENSG00000015520|Q9UHC9|NPC1L1	nc|ENSG00000015520|Q9UHC9|NPC1L1	nc|ENSG00000015520|Q9UHC9|NPC1L1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77716064453125	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.475	1	79.475	78.975	79.975	0								0	0	0	0.28386	1	7311	7311		37.159	0	1				62452	14740	41513	41529	70881	70881					0.07575822354476713
VLDTVAILS	9	Unmodified	_VLDTVAILS_					0	0	0		nc|ENSG00000015520|Q9UHC9|NPC1L1	nc|ENSG00000015520|Q9UHC9|NPC1L1	nc|ENSG00000015520|Q9UHC9|NPC1L1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77734375	2	465.778951	929.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.687	1	79.63	79.13	80.13	-0.056503								0	0	0	0.31828	1	7984	7984		24.203	3.2558	1				62453	14740	41513	41529	70882	70882					0.07575822354476713
VLDVKPITLLM	11	Unmodified	_VLDVKPITLLM_					0	0	0		ENSG00000169933|ENST00000675598|FRMPD4;nc|ENSG00000169933|Q14CM0|FRMPD4	ENSG00000169933|ENST00000675598|FRMPD4	ENSG00000169933|ENST00000675598|FRMPD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.5912170410156	3	414.589437	1240.74648	0.66329	0.00027499	3.7685	0.0015624	4.4317	0.0018374	414.59086540346516	32.474	0.93912	32.6	32.289	33.228	0.12643					54	21	4	0	0	0	0.6396	1	2283	2283		39.873	7.1226	1	671550			62454	6544	41514	41530	70883	70883					0.13573804084580843
VLDVQLLL	8	Unmodified	_VLDVQLLL_					0	0	0			REV__ENST00000574343.5_1_17:79862711-79863545:-|nuORF	REV__ENST00000574343.5_1_17:79862711-79863545:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.78936767578125	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.84341	1	3439	3439		24.203	0	1	652510	+		62455	28970	41515	41531	70884	70884					0.10984716596760791
VLDVQLLL	8	Unmodified	_VLDVQLLL_					0	0	0			REV__ENST00000574343.5_1_17:79862711-79863545:-|nuORF	REV__ENST00000574343.5_1_17:79862711-79863545:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.78887939453125	2	456.791861	911.569169	-0.68323	-0.00031209	2.4272	0.0011087	1.744	0.00079665	456.7927902182136	42.479	6.882	42.479	40.678	47.56	0.00016785					319	170	3	0	0	0	0.86288	1	3402	3402		26.796	0	1	608260	+		62456	28970	41515	41531	70885	70885					0.10984716596760791
VLEAAAAVV	9	Unmodified	_VLEAAAAVV_					0	0	0		ENST00000398654.7_1_18:44497289-44497409:-|nuORF	ENST00000398654.7_1_18:44497289-44497409:-|nuORF	ENST00000398654.7_1_18:44497289-44497409:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.7518615722656	2	421.752736	841.490919	-1.3453	-0.0005674	-2.1119	-0.00089069	-3.4572	-0.0014581	421.7520629711648	77.037	1.3073	77.037	76.021	77.329	0					79	55	2	0	0	0	0.7932	1	7013	7013		26.796	1.3459	1	212830			62457	11189	41516	41532	70886	70886					0.06383284011519663
VLEAILPLVQN	11	Unmodified	_VLEAILPLVQN_					0	0	0		nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;ENSG00000107263|ENST00000683357|RAPGEF1;ENST00000481260.1_1_9:134504569-134518759:-|nuORF	nc|ENSG00000107263|Q13905-2|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.8734130859375	2	604.866089	1207.71762	3.1995	0.0019352	1.0109	0.00061145	4.2104	0.0025467	604.8668402656671	112.87	1.1902	112.84	112.7	113.89	-0.024811					43	32	2	0	0	0	0.78658	1	12530	12530		14.137	0.68308	1	550830			62458	2339	41517	41533	70887	70887					0.12207402779813492
VLEDFEGENPQ	11	Unmodified	_VLEDFEGENPQ_					0	0	0		ENSG00000143590|ENST00000368408|EFNA3	ENSG00000143590|ENST00000368408|EFNA3	ENSG00000143590|ENST00000368408|EFNA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.526123046875	3	426.19458	1275.56191	-1.8271	-0.00077871	-2.9288	-0.0012482	-4.756	-0.002027	426.1932984322566	18.293	0.79013	18.337	18.124	18.914	0.044048					73	37	3	0	0	0	0.69071	1	311	311		33.039	1.9713	1	171570			62459	4649	41518	41534	70888	70888					-0.06484712532278536
VLEEGDIT	8	Unmodified	_VLEEGDIT_					0	0	0			REV__chr10:92637309-92637391|57|13.98|0.46|4.91|+|ENST00000677720|KIF11,KIF11	REV__chr10:92637309-92637391|57|13.98|0.46|4.91|+|ENST00000677720|KIF11,KIF11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.26556396484375	2	438.221465	874.428378	1.7781	0.00077921	3.292	0.0014426	5.0701	0.0022218	438.22290190670236	24.161	0.55963	23.647	23.365	23.924	-0.51365					20	12	2	0	0	0	0.4196	1	1124	1124		38.806	14.603	1	76607	+		62460	15483	41519	41535	70889	70889					-0.013859068473266234
VLEHKGLLTL	10	Unmodified	_VLEHKGLLTL_					0	0	0			REV__ENSG00000155254|ENST00000285605|MARVELD1	REV__ENSG00000155254|ENST00000285605|MARVELD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.845703125	2	561.847699	1121.68084	-0.47672	-0.00026785	-2.9318	-0.0016472	-3.4085	-0.0019151	561.8459227560618	97.238	1.868	97.238	96.81	98.678	0					92	44	4	0	0	0	0.77314	1	9738	9738		40.778	5.1599	1	643900	+		62461	20418	41520	41536	70890	70890					0.12487150953893433
VLELIVASVC	10	Unmodified	_VLELIVASVC_					0	0	0		ENST00000513574.1_1_4:156588948-156618002:+|nuORF	ENST00000513574.1_1_4:156588948-156618002:+|nuORF	ENST00000513574.1_1_4:156588948-156618002:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3031616210938	2	523.301736	1044.58892	1.699	0.00088911	1.7632	0.00092271	3.4623	0.0018118	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.86589	1	9666	9666		29.15	3.5755	1	13080000			62462	13055	41521	41537	70891	70891					0.06840724545213561
VLELIVASVC	10	Unmodified	_VLELIVASVC_					0	0	0		ENST00000513574.1_1_4:156588948-156618002:+|nuORF	ENST00000513574.1_1_4:156588948-156618002:+|nuORF	ENST00000513574.1_1_4:156588948-156618002:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.301736	1044.58892	1.2406	0.00064919	2.4977	0.0013071	3.7383	0.0019562	523.3029395587585	101.08	1.4079	101.12	100.73	102.14	0.044815					78	33	4	0	0	0	0.86589	1	10902	10902		29.15	1.2673	1	1032400			62463	13055	41521	41537	70892	70892					0.06840724545213561
VLELIVASVC	10	Unmodified	_VLELIVASVC_					0	0	0		ENST00000513574.1_1_4:156588948-156618002:+|nuORF	ENST00000513574.1_1_4:156588948-156618002:+|nuORF	ENST00000513574.1_1_4:156588948-156618002:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3036499023438	2	523.301736	1044.58892	1.1935	0.00062456	2.3787	0.0012448	3.5722	0.0018693	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.85934	1	10585	10585		35.618	5.1146	1	11944000			62464	13055	41521	41537	70893	70893					0.06840724545213561
VLEMTPVLGT	10	Unmodified	_VLEMTPVLGT_					0	0	0		nc|ENSG00000171723|Q9NQX3|GPHN;ENSG00000171723|ENST00000478722|GPHN	nc|ENSG00000171723|Q9NQX3|GPHN	nc|ENSG00000171723|Q9NQX3|GPHN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	530.2930908203125	2	530.291368	1058.56818	2.0317	0.0010774	1.7176	0.00091081	3.7492	0.0019882	530.2921909475622	90.714	4.5679	90.644	89.351	93.919	-0.069969					323	108	5	0	0	0	0.71042	3	9468	9468;9602;9626		44.117	6.9577	1	1811300			62465	6701	41522	41538	70894;70895;70896	70894					0.041241341655450015
VLEMTPVLGT	10	Unmodified	_VLEMTPVLGT_					0	0	0		nc|ENSG00000171723|Q9NQX3|GPHN;ENSG00000171723|ENST00000478722|GPHN	nc|ENSG00000171723|Q9NQX3|GPHN	nc|ENSG00000171723|Q9NQX3|GPHN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.29296875	2	530.291368	1058.56818	1.2413	0.00065826	2.5217	0.0013372	3.763	0.0019955	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.74274	5	9342	9294;9318;9330;9342;9440		42.396	6.7778	1	1864800			62466	6701	41522	41538	70897;70898;70899;70900;70901	70900					0.041241341655450015
VLEMTPVLGT	10	Unmodified	_VLEMTPVLGT_					0	0	0		nc|ENSG00000171723|Q9NQX3|GPHN;ENSG00000171723|ENST00000478722|GPHN	nc|ENSG00000171723|Q9NQX3|GPHN	nc|ENSG00000171723|Q9NQX3|GPHN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2932739257812	2	530.291368	1058.56818	0.74167	0.0003933	3.0682	0.001627	3.8098	0.0020203	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.6116	4	9016	9016;9076;9136;9251		49.442	5.0644	1	2081200			62467	6701	41522	41538	70902;70903;70904;70905	70902					0.041241341655450015
VLEPGSCC	8	Unmodified	_VLEPGSCC_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.1706237792969	2	404.172407	806.330261	-1.8319	-0.00074042	-3.7939	-0.0015334	-5.6259	-0.0022738	404.17089024317255	78.364	3.0861	78.491	77.697	80.783	0.12695					160	99	2	0	0	0	0.86791	1	7498	7498		28.254	6.5519	1	7642900			62468	15193	41523	41539	70906	70906					-0.08065129968531437
VLERQGAFDN	10	Unmodified	_VLERQGAFDN_					0	0	0			REV__ENST00000596078.5_1_19:6741032-6743282:+|nuORF	REV__ENST00000596078.5_1_19:6741032-6743282:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.261474609375	2	574.78837	1147.56219	-0.032658	-1.8771E-05	-3.6529	-0.0020997	-3.6856	-0.0021184	574.7862259781936	30.422	0.39431	30.426	30.229	30.623	0.0037212					12	8	2	0	0	0	0.37624	1	1999	1999		12.207	0	1	115990	+		62469	18663	41524	41540	70907	70907					-0.005692480217476259
VLEVAVLST	9	Unmodified	_VLEVAVLST_					0	0	0		nc|ENSG00000117114|O95490-3|ADGRL2;nc|ENSG00000117114|O95490-4|ADGRL2;chr1:81981150-81981808|38|12.34|0.54|4.51|+|ENST00000674489|ADGRL2,ADGRL2;nc|ENSG00000117114|O95490-2|ADGRL2;nc|ENSG00000117114|O95490-5|ADGRL2;nc|ENSG00000117114|O95490|ADGRL2;nc|ENSG00000117114|O95490-7|ADGRL2;ENSG00000117114|ENST00000686636|ADGRL2;nc|ENSG00000117114|O95490-6|ADGRL2	nc|ENSG00000117114|O95490-3|ADGRL2	nc|ENSG00000117114|O95490-3|ADGRL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7771911621094	2	465.778951	929.543348	-1.4399	-0.00067067	-1.5585	-0.00072594	-2.9984	-0.0013966	465.7781833018108	79.895	2.7794	79.994	78.292	81.072	0.098694					186	87	3	0	0	0	0.76255	1	7450	7450		35.618	0	1	287800			62470	58	41525	41541	70908	70908					0.07575822354453976
VLEVERFTS	9	Unmodified	_VLEVERFTS_					0	0	0		ENST00000475273.6_1_3:171439220-171455712:-|nuORF;nc|ENSG00000075651|Q13393-3|PLD1;nc|ENSG00000075651|Q13393-4|PLD1;nc|ENSG00000075651|Q13393-2|PLD1;ENSG00000075651|ENST00000351298|PLD1	ENST00000475273.6_1_3:171439220-171455712:-|nuORF	ENST00000475273.6_1_3:171439220-171455712:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.2532958984375	2	540.290214	1078.56587	-0.1202	-6.4942E-05	0.35321	0.00019083	0.23301	0.00012589	540.2903175248113	52.189	0.55175	52.187	51.874	52.426	-0.0020447					21	12	3	0	0	0	0.20789	1	4461	4461		16.473	8.2419	1	90694			62471	1339	41526	41542	70909	70909					0.029734217520854145
VLEVPVPVV	9	Unmodified	_VLEVPVPVV_					0	0	0		ENST00000474564.1_1_6:75852961-75855988:-|nuORF	ENST00000474564.1_1_6:75852961-75855988:-|nuORF	ENST00000474564.1_1_6:75852961-75855988:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	475.80157470703125	2	475.799686	949.584819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.6	1	66.6	66.1	67.1	0								0	0	0	0.32894	1	5871	5871		20.482	1.1219	1				62472	12306	41527	41543	70910	70910					0.10801003113806473
VLFDLLVSES	10	Unmodified	_VLFDLLVSES_					0	0	0		ENST00000486796.1_1_3:33686156-33700574:-|nuORF	ENST00000486796.1_1_3:33686156-33700574:-|nuORF	ENST00000486796.1_1_3:33686156-33700574:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.312744140625	2	561.308072	1120.60159	0.39133	0.00021966	4.0242	0.0022588	4.4156	0.0024785	561.3093913762153	55.356	2.8595	55.925	53.691	56.55	0.56836					96	69	3	0	0	0	0.6116	1	5721	5721		49.442	1.7842	1	1532900			62473	12587	41528	41544	70911	70911					0.04611459209104396
VLFFVGLI	8	Unmodified	_VLFFVGLI_					0	0	0		ENSG00000169313|ENST00000302632|P2RY12	ENSG00000169313|ENST00000302632|P2RY12	ENSG00000169313|ENST00000302632|P2RY12	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	454.24212646484375	2	454.286214	906.557876	-1.2062	-0.00054796	0.32214	0.00014634	-0.88405	-0.00040161	454.28607568761015	83.26	1.6754	83.425	83.018	84.693	0.1651					56	38	2	0	0	0	0.4196	1	8025	8025		24.504	7.799	1	57916			62474	6486	41529	41545	70912	70912					0.1008593929327617
VLFGAVFRK	9	Unmodified	_VLFGAVFRK_					0	0	0			REV__ENST00000368194.7_1_1:157014344-157014518:-|nuORF	REV__ENST00000368194.7_1_1:157014344-157014518:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	518.8194580078125	2	518.818744	1035.62294	-0.12817	-6.6495E-05	3.061	0.0015881	2.9329	0.0015216	518.8201606196009	48.341	0.8793	49.245	48.885	49.765	0.90424					60	21	4	0	0	0	0.7932	1	4658	4658		26.796	1.3459	1	3317100	+		62475	25587	41530	41546	70913	70913					0.10654933819137113
VLFHKGGS	8	Unmodified	_VLFHKGGS_					0	0	0			REV__ENST00000225174.7_1_10:81114292-81114370:+|nuORF	REV__ENST00000225174.7_1_10:81114292-81114370:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.592529296875	2	422.73742	843.460287	-1.8184	-0.00076872	2.5243	0.0010671	0.70586	0.00029839	422.7383053866402	50.394	0.6586	50.423	50.036	50.695	0.029629					45	20	3	0	0	0	0.4196	1	3911	3911		19.36	0	1	290360	+		62476	24173	41531	41547	70914	70914					0.03229550417142946
VLFHKGGS	8	Unmodified	_VLFHKGGS_					0	0	0			REV__ENST00000225174.7_1_10:81114292-81114370:+|nuORF	REV__ENST00000225174.7_1_10:81114292-81114370:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	422.73742	843.460287	0.27999	0.00011836	0.56008	0.00023677	0.84007	0.00035513	422.73741475921383	50.406	0.7287	50.456	50.102	50.831	0.0499	0.08505	-0.00054241	NaN	19.36	45	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	316490	+		62477	24173	41531	41547							0.03229550417142946
VLFHLCREM	9	Carbamidomethyl (C)	_VLFHLC(Carbamidomethyl (C))REM_	VLFHLC(1)REM		VLFHLC(56)REM		0	1	0			REV__nc|ENSG00000171109|Q8IWA4-2|MFN1	REV__nc|ENSG00000171109|Q8IWA4-2|MFN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	602.8016357421875	2	602.801911	1203.58927	0.65075	0.00039227	-1.9108	-0.0011518	-1.26	-0.00075954	602.8006043046089	72.774	0.78786	72.904	72.521	73.309	0.13064					71	26	4	0	0	0	0.43338	1	6725	6725		55.504	7.8469	1	436040	+		62478	21713	41532	41548	70915	70915	266				-0.004381790065963287
VLFIVHPTRMT	11	Unmodified	_VLFIVHPTRMT_					0	0	0		ENST00000418609.5_1_4:186541272-186544193:-|nuORF	ENST00000418609.5_1_4:186541272-186544193:-|nuORF	ENST00000418609.5_1_4:186541272-186544193:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.58563232421875	3	438.584797	1312.73256	1.1659	0.00051134	0.94123	0.00041281	2.1071	0.00092414	438.58516849233104	31.929	1.1484	31.923	31.521	32.669	-0.0061455					44	26	2	0	0	0	0.74405	1	1806	1806		23.378	0	1	409390			62479	11426	41533	41549	70916	70916					0.08870571376110092
VLFLFAINLFL	11	Unmodified	_VLFLFAINLFL_					0	0	0			REV__ENST00000487045.6_1_16:31191511-31194161:+|nuORF	REV__ENST00000487045.6_1_16:31191511-31194161:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.267822265625	3	437.268804	1308.78458	-0.097306	-4.2549E-05	-2.2068	-0.00096494	-2.3041	-0.0010075	437.26771910027475	53.737	1.8842	53.732	52.971	54.855	-0.0053673					190	57	5	0	0	0	0.78683	1	4733	4733		14.086	0	1	2126600	+		62480	27566	41534	41550	70917	70917					0.14254058061533215
VLFLLMGVL	9	Oxidation (M)	_VLFLLM(Oxidation (M))GVL_		VLFLLM(1)GVL		VLFLLM(49)GVL	0	0	1			REV__ENST00000302516.9_1_16:70607775-70608060:+|nuORF	REV__ENST00000302516.9_1_16:70607775-70608060:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8145446777344	2	510.811739	1019.60893	0.48537	0.00024793	1.7613	0.00089969	2.2467	0.0011476	510.81242257144913	78.865	0.80582	79.418	79.068	79.874	0.55246					44	18	3	0	0	0	0.55559	1	9049	9049		49.211	6.8147	1	751780	+		62481	24787	41535	41551	70918	70918		386			0.09990520275835024
VLFLLPKL	8	Unmodified	_VLFLLPKL_					0	0	0		ENST00000399702.5_1_16:2653454-2660566:+|nuORF	ENST00000399702.5_1_16:2653454-2660566:+|nuORF	ENST00000399702.5_1_16:2653454-2660566:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.2555847167969	2	471.822964	941.631375	-1.0129	-0.00047793	-3.1834	-0.001502	-4.1964	-0.0019799	471.8212515527135	30.306	0.53057	30.335	30.185	30.716	0.028618					17	11	3	0	0	0	0.4196	1	1982	1982		33.516	12.569	1	58220			62482	11210	41536	41552	70919	70919					0.15822487735749746
VLFMFSSSE	9	Unmodified	_VLFMFSSSE_					0	0	0			REV__nc|ENSG00000156873|P15735-2|PHKG2	REV__nc|ENSG00000156873|P15735-2|PHKG2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3153076171875	2	523.746793	1045.47903	-0.17011	-8.9092E-05	3.9143	0.0020501	3.7442	0.001961	523.7486730285704	38.745	0.42042	39.087	38.938	39.358	0.34187					16	9	2	0	0	0	0.20789	1	3239	3239		30.504	0	1	121160	+		62483	20512	41537	41553	70920	70920					-0.041887007939521936
VLFRLAAKSFG	11	Unmodified	_VLFRLAAKSFG_					0	0	0			REV__ENST00000487459.5_1_7:116660393-116660552:+|nuORF	REV__ENST00000487459.5_1_7:116660393-116660552:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.23394775390625	3	403.576519	1207.70773	-1.2645	-0.00051032	-3.1158	-0.0012575	-4.3803	-0.0017678	403.57522857641675	82.287	0.76464	82.287	81.965	82.73	0					28	18	2	0	0	0	0.17294	1	7653	7653		25.126	5.0955	1	40608	+		62484	27576	41538	41554	70921	70921					0.11218259565066546
VLFRRLKMM	9	Unmodified	_VLFRRLKMM_					0	0	0			REV__ENST00000518667.1_1_8:66643803-66660021:-|nuORF	REV__ENST00000518667.1_1_8:66643803-66660021:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.357177734375	2	597.354114	1192.69367	1.5032	0.00089792	1.7759	0.0010608	3.279	0.0019587	597.3558219755598	92.253	2.834	92.7	90.608	93.442	0.44661					159	67	4	0	0	0	0.7932	1	10962	10962		26.796	1.222	1	1501500	+		62485	23546	41539	41555	70922	70922					0.10503567540786207
VLFRRSLDVL	10	Unmodified	_VLFRRSLDVL_					0	0	0			REV__ENSG00000142798|ENST00000374695|HSPG2	REV__ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2482604980469	3	406.583674	1216.72919	3.1806	0.0012932	-2.547	-0.0010356	0.6336	0.00025761	406.5823777958884	112.82	1.2516	112.85	112.71	113.96	0.028854					79	33	3	0	0	0	0.85285	1	12434	12434		16.717	0	1	2434900	+		62486	19756	41540	41556	70923	70923					0.12949644593800258
VLFTGITG	8	Unmodified	_VLFTGITG_					0	0	0		ENSG00000115423|ENST00000389394|DNAH6;nc|ENSG00000115423|Q9C0G6-4|DNAH6;ENST00000602588.1_2_2:84885442-84924911:+|nuORF	ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	404.2326965332031	2	404.234179	806.453805	-1.8204	-0.00073588	-0.96943	-0.00039188	-2.7898	-0.0011278	404.2336075989579	84.856	4.0154	85.032	83.028	87.044	0.17561					233	93	5	0	0	0	0.86288	1	8322	8322		26.796	0	1	4754100			62487	2844	41541	41557	70924	70924					0.042836124657469554
VLFTGITG	8	Unmodified	_VLFTGITG_					0	0	0		ENSG00000115423|ENST00000389394|DNAH6;nc|ENSG00000115423|Q9C0G6-4|DNAH6;ENST00000602588.1_2_2:84885442-84924911:+|nuORF	ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.23272705078125	2	404.234179	806.453805	0.88498	0.00035774	-4.1951	-0.0016958	-3.3101	-0.0013381	404.2323708520731	84.87	3.8747	85.31	83.261	87.136	0.43967					162	94	4	0	0	0	0.91005	1	9866	9866		42.474	0	1	2366300			62488	2844	41541	41557	70925	70925					0.042836124657469554
VLFVRNLANT	10	Unmodified	_VLFVRNLANT_					0	0	0		nc|ENSG00000271793|O60506-4|SYNCRIP;chr6:85612923-85615019|61|17.2|0.0|20.71|-|ENST00000677059|SYNCRIP,SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000271793|O60506-5|SYNCRIP;ENST00000434910.1_1_20:6195317-6195437:+|nuORF	nc|ENSG00000271793|O60506-4|SYNCRIP	nc|ENSG00000271793|O60506-4|SYNCRIP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	572.846435546875	2	573.835123	1145.65569	0.12394	7.112E-05	0.046107	2.6458E-05	0.17004	9.7577E-05	573.834696591371	17.076	0.30462	16.594	16.457	16.761	-0.48256					11	6	3	0	0	0	0.37624	1	211	211		14.137	0	1	47013			62489	487	41542	41558	70926	70926					0.08869096151306621
VLFWKNCV	8	Unmodified	_VLFWKNCV_					0	0	0			REV__ENST00000227638.7_1_11:93914076-93914166:+|nuORF	REV__ENST00000227638.7_1_11:93914076-93914166:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	504.3478698730469	2	504.770406	1007.52626	0.18878	9.5289E-05	3.5133	0.0017734	3.7021	0.0018687	505.2739499959861	37.764	0.15447	37.706	37.566	37.72	-0.057915					6	5	2	0	0	0	0.4196	1	2170	2170		18.324	3.4595	1	36885	+		62490	24183	41543	41559	70927	70927					0.022796232676682848
VLGALLLLFFC	11	Unmodified	_VLGALLLLFFC_					0	0	0		ENSG00000182170|ENST00000332314|MRGPRG	ENSG00000182170|ENST00000332314|MRGPRG	ENSG00000182170|ENST00000332314|MRGPRG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.8590698242188	2	604.859221	1207.70389	0.73307	0.0004434	-2.048	-0.0012388	-1.3149	-0.00079535	604.857969611277	81.761	1.4227	81.906	80.909	82.331	0.14551					61	32	3	0	0	0	0.62614	1	7874	7874		24.203	7.7296	1	397570			62491	7430	41544	41560	70928	70928					0.10834453747020234
VLGALQKNAY	10	Unmodified	_VLGALQKNAY_					0	0	0			REV__ENSG00000108784|ENST00000225927|NAGLU	REV__ENSG00000108784|ENST00000225927|NAGLU	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.806640625	2	538.808574	1075.60259	-1.4886	-0.00080208	-1.9733	-0.0010633	-3.462	-0.0018653	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.85934	1	8959	8959		35.618	10.168	1	783690	+		62492	17730	41545	41561	70929	70929					0.06781718368642942
VLGCAKMH	8	Carbamidomethyl (C),Oxidation (M)	_VLGC(Carbamidomethyl (C))AKM(Oxidation (M))H_	VLGC(1)AKMH	VLGCAKM(1)H	VLGC(47)AKMH	VLGCAKM(47)H	0	1	1		ENST00000489499.5_1_1:114442984-114447339:-|nuORF;ENST00000484201.5_1_1:114440516-114447658:-|nuORF;ENSG00000134262|ENST00000369569|AP4B1	ENST00000489499.5_1_1:114442984-114447339:-|nuORF	ENST00000489499.5_1_1:114442984-114447339:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.22552490234375	2	466.228048	930.441542	-0.37216	-0.00017351	-4.2462	-0.0019797	-4.6184	-0.0021532	466.2257410081479	78.872	0.89133	79.422	79.066	79.957	0.55032					62	20	5	0	0	0	0.92176	1	9043	9043		46.766	8.9549	1	1159300			62493	3922	41546	41562	70930	70930	53	70			-0.02646070540583878
VLGFGRSH	8	Unmodified	_VLGFGRSH_					0	0	0		ENST00000397463.2_1_2:133402612-133403014:-|nuORF	ENST00000397463.2_1_2:133402612-133403014:-|nuORF	ENST00000397463.2_1_2:133402612-133403014:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26776123046875	2	436.740494	871.466435	1.1887	0.00051914	-0.51957	-0.00022692	0.6691	0.00029222	436.74034797323833	52.184	0.61797	52.196	52.086	52.704	0.012436					14	13	2	0	0	0	0.4196	1	4532	4532		18.324	0	1	39058			62494	11148	41547	41563	70931	70931					0.02556068648652854
VLGGMFFL	8	Unmodified	_VLGGMFFL_					0	0	0		ENSG00000183018|ENST00000329078|SPNS2;ENST00000573990.1_1_17:4439512-4439722:+|nuORF;ENST00000576635.6_1_17:4439512-4440234:+|nuORF;ENST00000571668.5_1_17:4437040-4440234:+|nuORF	ENSG00000183018|ENST00000329078|SPNS2	ENSG00000183018|ENST00000329078|SPNS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	442.2406311035156	2	442.24095	882.467346	0.56789	0.00025114	-0.64039	-0.0002832	-0.0725	-3.2062E-05	442.2405741499715	81.348	8.3394	81.491	77.384	85.724	0.14352					462	236	4	0	0	0	0.88393	1	7948	7948		33.493	0	1	1094000			62495	7492	41548	41564	70932	70932					0.021411469733379818
VLGGPKTVHL	10	Unmodified	_VLGGPKTVHL_					0	0	0			REV__ENSG00000165171|ENST00000297873|METTL27	REV__ENSG00000165171|ENST00000297873|METTL27	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	510.81317138671875	2	510.813659	1019.61277	-0.37371	-0.0001909	-0.93586	-0.00047805	-1.3096	-0.00066895	510.8128793953087	81.566	1.0195	81.711	81.232	82.251	0.14513					35	23	2	0	0	0	0.86452	1	7806	7806		30.504	8.5438	1	196090	+		62496	21156	41549	41565	70933	70933					0.10374326093892705
VLGGPKTVHL	10	Unmodified	_VLGGPKTVHL_					0	0	0			REV__ENSG00000165171|ENST00000297873|METTL27	REV__ENSG00000165171|ENST00000297873|METTL27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8141174316406	2	510.813659	1019.61277	1.919	0.00098027	-3.5506	-0.0018137	-1.6316	-0.00083342	510.8119201204561	103	0.33368	103.23	103.13	103.47	0.22556					13	8	2	0	0	0	0.86718	1	12533	12533		27.882	1.0861	1	1124000	+		62497	21156	41549	41565	70934	70934					0.10374326093892705
VLGGRSHN	8	Unmodified	_VLGGRSHN_					0	0	0		nc|ENSG00000099910|Q53GT1-3|KLHL22;ENSG00000099910|ENST00000328879|KLHL22	nc|ENSG00000099910|Q53GT1-3|KLHL22	nc|ENSG00000099910|Q53GT1-3|KLHL22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2273864746094	2	420.227751	838.440949	-1.7925	-0.00075327	2.1594	0.00090746	0.36692	0.00015419	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.92973	1	7346	7346		50.025	7.5501	1	831720			62498	1777	41550	41566	70935	70935					0.015265941262214255
VLGGRSHN	8	Unmodified	_VLGGRSHN_					0	0	0		nc|ENSG00000099910|Q53GT1-3|KLHL22;ENSG00000099910|ENST00000328879|KLHL22	nc|ENSG00000099910|Q53GT1-3|KLHL22	nc|ENSG00000099910|Q53GT1-3|KLHL22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.22821044921875	2	420.227751	838.440949	0.39025	0.000164	-0.22921	-9.6321E-05	0.16104	6.7675E-05	420.2275761359418	78.73	4.4768	79.141	77.509	81.986	0.4106					178	106	2	0	0	0	0.88915	1	8958	8958		35.201	0	1	423290			62499	1777	41550	41566	70936	70936					0.015265941262214255
VLGGTRRPA	9	Unmodified	_VLGGTRRPA_					0	0	0			REV__ENST00000483941.1_1_13:37453875-37494793:-|nuORF	REV__ENST00000483941.1_1_13:37453875-37494793:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.7789306640625	2	463.780151	925.545748	0.21343	9.8984E-05	-2.2527	-0.0010448	-2.0393	-0.00094578	463.7789090277637	39.35	0.42563	39.438	39.145	39.57	0.088371					22	11	3	0	0	0	0.7932	1	2415	2415		19.36	0	1	186570	+		62500	25338	41551	41567	70937	70937					0.07999715602795732
VLGGVAGLLL	10	Unmodified	_VLGGVAGLLL_					0	0	0		ENST00000437800.6_1_12:6925109-6928492:+|nuORF;ENSG00000010610|ENST00000011653|CD4	ENST00000437800.6_1_12:6925109-6928492:+|nuORF	ENST00000437800.6_1_12:6925109-6928492:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3011169433594	2	456.299853	910.585153	0.15231	6.9501E-05	2.9243	0.0013344	3.0766	0.0014039	456.30102814495837	33.268	1.6065	33.378	33.034	34.64	0.10991					186	70	4	0	0	0	0.86786	1	1650	1650		26.796	0	1	1696300			62501	770	41552	41568	70938	70938					0.1262842283365444
VLGGVAGLLL	10	Unmodified	_VLGGVAGLLL_					0	0	0		ENST00000437800.6_1_12:6925109-6928492:+|nuORF;ENSG00000010610|ENST00000011653|CD4	ENST00000437800.6_1_12:6925109-6928492:+|nuORF	ENST00000437800.6_1_12:6925109-6928492:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.3013000488281	2	456.299853	910.585153	-1.6788	-0.00076604	2.8954	0.0013212	1.2166	0.00055514	456.3009473461045	41.485	1.1953	42.119	41.391	42.586	0.6339					70	32	4	0	0	0	0.86786	1	3671	3671		26.796	0	1	3839000			62502	770	41552	41568	70939	70939					0.1262842283365444
VLGHVFGCL	9	Unmodified	_VLGHVFGCL_					0	0	0		nc|ENSG00000156414|Q8NDG6-2|TDRD9;ENSG00000156414|ENST00000409874|TDRD9	nc|ENSG00000156414|Q8NDG6-2|TDRD9	nc|ENSG00000156414|Q8NDG6-2|TDRD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7554931640625	2	472.754756	943.494958	-1.0398	-0.00049155	4.1241	0.0019497	3.0843	0.0014581	472.7566010311961	25.503	0.44019	25.566	25.353	25.793	0.063122					38	21	2	0	0	0	0.72098	1	932	932		39.021	3.4032	1	86145			62503	5377	41553	41569	70940	70940					0.02095050233594975
VLGIFLTA	8	Unmodified	_VLGIFLTA_					0	0	0		ENSG00000036828|ENST00000639785|CASR;nc|ENSG00000036828|P41180-2|CASR	ENSG00000036828|ENST00000639785|CASR	ENSG00000036828|ENST00000639785|CASR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2582092285156	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.81548	1	605	605		20.482	3.1169	1	679020			62504	906	41554	41570	70941	70941					0.08288775879509558
VLGLKRIA	8	Unmodified	_VLGLKRIA_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3001403808594	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.85228	1	6598	6598		10.185	1.3624	1	1072400	+		62505	21140	41555	41571	70942	70942					0.14627262273347696
VLGLKRIA	8	Unmodified	_VLGLKRIA_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.30023193359375	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.85787	1	6987	6987		9.4706	0	1	1680500	+		62506	21140	41555	41571	70943	70943					0.14627262273347696
VLGLRMLFAK	10	Unmodified	_VLGLRMLFAK_					0	0	0		nc|ENSG00000211829|B7Z8K6|TRDC	nc|ENSG00000211829|B7Z8K6|TRDC	nc|ENSG00000211829|B7Z8K6|TRDC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3562622070312	2	574.354637	1146.69472	0.86564	0.00049718	1.3595	0.00078082	2.2251	0.001278	574.3552739338568	99.781	2.6781	99.932	98.182	100.86	0.15073					107	61	3	0	0	0	0.85251	1	10432	10432		19.997	0	1	245470			62507	15240	41556	41572	70944	70944					0.1272410518131437
VLGPEGVAR	9	Unmodified	_VLGPEGVAR_					0	0	0			REV__nc|ENSG00000072195|Q15772-1|SPEG	REV__nc|ENSG00000072195|Q15772-1|SPEG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2580871582031	2	449.261259	896.507966	-1.3059	-0.00058669	-0.46348	-0.00020822	-1.7694	-0.00079491	449.2608709500843	73.271	0.46545	73.4	73.031	73.496	0.1292					30	18	2	0	0	0	0.78536	1	6743	6743		29.15	2.3535	1	216530	+		62508	16641	41557	41573	70945	70945					0.05557204617332445
VLGPELPK	8	Unmodified	_VLGPELPK_					0	0	0		ENSG00000182326|ENST00000360817|C1S;ENST00000443875.5_1_12:7174318-7177952:+|nuORF;ENST00000495061.5_1_12:7174408-7176017:+|nuORF	ENSG00000182326|ENST00000360817|C1S	ENSG00000182326|ENST00000360817|C1S	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	427.3027648925781	2	426.763104	851.511654	1.6512	0.00070466	1.9343	0.00082548	3.5855	0.0015301	426.76387990270564	72.771	0.98062	72.813	72.23	73.211	0.042114					74	42	2	0	0	0	0.4196	1	7010	7010		24.203	0	1	117310			62509	7448	41558	41574	70946	70946					0.07995874391178859
VLGPPKVP	8	Unmodified	_VLGPPKVP_					0	0	0			REV__ENSG00000179057|ENST00000513874|IGSF22	REV__ENSG00000179057|ENST00000513874|IGSF22	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.7612609863281	2	403.760364	805.506175	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.347	1	65.472	64.972	65.972	0.12532								0	0	0	0.30674	1	5807	5807		15.636	0.97212	1		+		62510	22313	41559	41575	70947	70947					0.0956419559937558
VLGPRGAR	8	Unmodified	_VLGPRGAR_					0	0	0			REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2520446777344	2	413.256311	824.49807	3.1803	0.0013143	-2.4657	-0.001019	0.71452	0.00029528	413.255268367017	96.776	0.89264	96.824	96.398	97.29	0.047798					43	20	3	0	0	0	0.85277	1	10286	10286		25.45	7.1258	1	199380	+		62511	28233	41560	41576	70948	70948					0.07880061402613592
VLGPRGAR	8	Unmodified	_VLGPRGAR_					0	0	0			REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	413.256311	824.49807	-1.0484	-0.00043326	1.4114	0.00058325	0.36296	0.00015	413.2569038087744	97.235	0.56789	97.235	96.898	97.466	0	0.29997	0.0013951	NaN	25.45	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82762	+		62512	28233	41560	41576							0.07880061402613592
VLGPRGAR	8	Unmodified	_VLGPRGAR_					0	0	0			REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	413.256311	824.49807	-0.18641	-7.7033E-05	0.6795	0.00028081	0.4931	0.00020378	413.25652946187915	96.997	1.0305	97.059	96.565	97.596	0.062225	0.12412	0.00079017	NaN	25.45	38	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	191980	+		62513	28233	41560	41576							0.07880061402613592
VLGPRGAR	8	Unmodified	_VLGPRGAR_					0	0	0			REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	413.256311	824.49807	2.0959	0.00086612	-1.3664	-0.00056466	0.72948	0.00030146	413.2556834276608	96.909	0.85792	96.852	96.413	97.271	-0.056381	-0.082803	-0.00090077	NaN	25.45	35	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181060	+		62514	28233	41560	41576							0.07880061402613592
VLGPRGAR	8	Unmodified	_VLGPRGAR_					0	0	0			REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	413.256311	824.49807	3.1803	0.0013143	-2.4657	-0.001019	0.71452	0.00029528	413.255268367017	96.776	0.89264	96.824	96.398	97.29	0.047798	-0.11097	-0.0018094	NaN	25.45	43	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	199380	+		62515	28233	41560	41576							0.07880061402613592
VLGPRGAR	8	Unmodified	_VLGPRGAR_					0	0	0			REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	413.256311	824.49807	-1.7981	-0.00074306	2.4655	0.0010189	0.66741	0.00027581	413.2572789206112	96.679	0.93806	96.91	96.352	97.29	0.23103	-0.024764	0.0022663	NaN	25.45	37	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156040	+		62516	28233	41560	41576							0.07880061402613592
VLGPRGAR	8	Unmodified	_VLGPRGAR_					0	0	0			REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	413.256311	824.49807	0.69703	0.00028805	-0.03363	-1.3898E-05	0.6634	0.00027415	413.25634152234056	96.603	0.73081	96.766	96.489	97.219	0.16317	-0.16868	0.00020076	NaN	25.45	31	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116750	+		62517	28233	41560	41576							0.07880061402613592
VLGPRGAR	8	Unmodified	_VLGPRGAR_					0	0	0			REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	REV__ENST00000527742.1_1_12:57859296-57859723:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	413.256311	824.49807	-1.9116	-0.00079	2.8956	0.0011966	0.98399	0.00040664	413.257501414695	96.696	0.86629	96.898	96.488	97.354	0.20208	-0.036867	0.0026218	NaN	25.45	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77677	+		62518	28233	41560	41576							0.07880061402613592
VLGPVRCV	8	Unmodified	_VLGPVRCV_					0	0	0			REV__ENST00000602308.1_1_1:228584351-228584825:-|nuORF	REV__ENST00000602308.1_1_1:228584351-228584825:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7512512207031	2	421.749473	841.484393	2.261	0.00095358	2.5621	0.0010806	4.8232	0.0020342	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.82464	2	7335	7335;7543		35.201	1.6851	1	532850	+		62519	20387	41561	41577	70949;70950	70949					0.057310675791541144
VLGRHGSN	8	Unmodified	_VLGRHGSN_					0	0	0		nc|ENSG00000074603|Q6V1X1-2|DPP8;ENSG00000074603|ENST00000300141|DPP8;nc|ENSG00000074603|Q6V1X1|DPP8;nc|ENSG00000074603|Q6V1X1-4|DPP8;nc|ENSG00000074603|Q6V1X1-5|DPP8	nc|ENSG00000074603|Q6V1X1-2|DPP8	nc|ENSG00000074603|Q6V1X1-2|DPP8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.2279357910156	2	420.227751	838.440949	0.53933	0.00022664	-0.28176	-0.0001184	0.25757	0.00010824	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.89494	1	7673	7673		37.159	1.9584	1	678130			62520	1309	41562	41578	70951	70951					0.015265941262327942
VLGRLAKL	8	Unmodified	_VLGRLAKL_					0	0	0			REV__ENST00000487998.5_1_10:92631743-92654759:+|nuORF	REV__ENST00000487998.5_1_10:92631743-92654759:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.3002014160156	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.85787	1	6612	6612		9.4706	0	1	1072400	+		62521	20131	41563	41579	70952	70952					0.14627262273359065
VLGRLAKL	8	Unmodified	_VLGRLAKL_					0	0	0			REV__ENST00000487998.5_1_10:92631743-92654759:+|nuORF	REV__ENST00000487998.5_1_10:92631743-92654759:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.3001403808594	2	435.300188	868.585822	-0.4861	-0.0002116	0.75033	0.00032662	0.26423	0.00011502	435.30037700412674	73.88	1.5156	73.838	73.547	75.063	-0.042015					137	56	3	0	0	0	0.81724	1	7349	7349		14.664	0	1	881780	+		62522	20131	41563	41579	70953	70953					0.14627262273359065
VLGRLAKL	8	Unmodified	_VLGRLAKL_					0	0	0			REV__ENST00000487998.5_1_10:92631743-92654759:+|nuORF	REV__ENST00000487998.5_1_10:92631743-92654759:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.300048828125	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.80963	1	6857	6857		15.636	0	1	1852500	+		62523	20131	41563	41579	70954	70954					0.14627262273359065
VLGRPPLCK	9	Unmodified	_VLGRPPLCK_					0	0	0			REV__ENSG00000160161|ENST00000291495|CILP2	REV__ENSG00000160161|ENST00000291495|CILP2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79754638671875	2	491.796955	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.112	1	64.078	63.578	64.578	-0.034256								0	0	0	0.32159	1	6106	6106		23.042	2.0956	1		+		62524	20696	41564	41580	70955	70955					0.08783001050335315
VLGRREAAK	9	Unmodified	_VLGRREAAK_					0	0	0		ENST00000479094.5_1_9:96213558-96213645:-|nuORF	ENST00000479094.5_1_9:96213558-96213645:-|nuORF	ENST00000479094.5_1_9:96213558-96213645:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.3082580566406	2	500.306532	998.598512	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.072	1	94.513	94.013	95.013	0.44099								0	0	0	0.34348	1	11222	11222		16.473	0	1				62525	12402	41565	41581	70956	70956					0.09915673665602753
VLGRWAAP	8	Unmodified	_VLGRWAAP_					0	0	0		ENST00000478619.1_1_3:50374315-50374750:-|nuORF	ENST00000478619.1_1_3:50374315-50374750:-|nuORF	ENST00000478619.1_1_3:50374315-50374750:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2523193359375	2	435.253237	868.491922	-0.16621	-7.2343E-05	-4.2181	-0.0018359	-4.3843	-0.0019083	435.25131922905655	77.36	2.3607	77.413	75.68	78.041	0.052696					163	95	3	0	0	0	0.86791	1	7352	7352		28.254	4.0515	1	768200			62526	12394	41566	41582	70957	70957					0.05241543171075591
VLGSGARSH	9	Unmodified	_VLGSGARSH_					0	0	0			REV__nc|ENSG00000183337|Q6W2J9-3|BCOR	REV__nc|ENSG00000183337|Q6W2J9-3|BCOR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24163818359375	2	442.240858	882.467164	-1.4875	-0.00065783	1.6878	0.00074643	0.20036	8.8607E-05	442.24148848241214	79.629	2.7036	79.728	77.569	80.272	0.098701					195	94	3	0	0	0	0.78983	1	7349	7349		27.882	2.3082	1	257300	+		62527	22598	41567	41583	70958	70958					0.021228632977113193
VLGTKSVAS	9	Unmodified	_VLGTKSVAS_					0	0	0		ENST00000494986.5_1_2:74682243-74683007:+|nuORF	ENST00000494986.5_1_2:74682243-74683007:+|nuORF	ENST00000494986.5_1_2:74682243-74683007:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	431.2556457519531	2	431.255643	860.496732	-0.20395	-8.7954E-05	0.53799	0.00023201	0.33405	0.00014406	431.25575551431126	26.766	1.3401	26.591	26.027	27.367	-0.17559					69	29	4	0	0	0	0.17307	1	1505	1505		79.451	1.5072	1	1047400			62528	12757	41568	41584	70959	70959					0.06090382523188964
VLGVGPACKP	10	Unmodified	_VLGVGPACKP_					0	0	0			REV__ENSG00000142871|ENST00000451137|CCN1	REV__ENSG00000142871|ENST00000451137|CCN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.768798828125	2	470.767863	939.521173	-1.6666	-0.00078458	3.6368	0.0017121	1.9702	0.00092751	470.76948436620563	48.56	1.0696	48.56	48.244	49.314	0					49	25	3	0	0	0	0.81018	1	3795	3795		38.806	7.2763	1	317180	+		62529	19758	41569	41585	70960	70960					0.048993194050581224
VLGVTAVGP	9	Unmodified	_VLGVTAVGP_					0	0	0			REV__ENSG00000198753|ENST00000361971|PLXNB3	REV__ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7472229003906	2	406.747453	811.480354	1.2378	0.00050346	1.6211	0.00065937	2.8589	0.0011628	406.74814162114853	41.147	0.85941	41.154	40.772	41.631	0.0065727					32	22	2	0	0	0	0.7932	1	2977	2977		19.36	0	1	110810	+		62530	23374	41570	41586	70961	70961					0.06707301357096185
VLGVTAVGP	9	Unmodified	_VLGVTAVGP_					0	0	0			REV__ENSG00000198753|ENST00000361971|PLXNB3	REV__ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	406.747453	811.480354	0.19135	7.7831E-05	2.7943	0.0011366	2.9856	0.0012144	406.7485535898968	41.386	1.2995	41.355	40.692	41.991	-0.030991	0.09707	-6.2267E-05	NaN	19.36	56	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172330	+		62531	23374	41570	41586							0.06707301357096185
VLGVTAVGP	9	Unmodified	_VLGVTAVGP_					0	0	0			REV__ENSG00000198753|ENST00000361971|PLXNB3	REV__ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	406.747453	811.480354	-1.2838	-0.00052218	3.8667	0.0015728	2.5829	0.0010506	406.7489639160479	41.307	1.9125	41.266	40.272	42.184	-0.04081	0.0075086	0.00081019	NaN	19.36	66	50	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	157820	+		62532	23374	41570	41586							0.06707301357096185
VLGVTAVGP	9	Unmodified	_VLGVTAVGP_					0	0	0			REV__ENSG00000198753|ENST00000361971|PLXNB3	REV__ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.747453	811.480354	1.2378	0.00050346	1.6211	0.00065937	2.8589	0.0011628	406.74814162114853	41.147	0.85941	41.154	40.772	41.631	0.0065727	-0.10458	-0.0010166	NaN	19.36	32	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110810	+		62533	23374	41570	41586							0.06707301357096185
VLGYNPKF	8	Unmodified	_VLGYNPKF_					0	0	0			REV__ENST00000552666.1_1_14:36235117-36235897:+|nuORF	REV__ENST00000552666.1_1_14:36235117-36235897:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	469.2587890625	2	469.260728	936.506903	0.57593	0.00027026	-4.4706	-0.0020979	-3.8947	-0.0018276	469.2584719664024	25.428	0.58886	25.479	25.19	25.779	0.050453					50	24	3	0	0	0	0.89457	1	1015	1015		37.028	1.4102	1	123140	+		62534	28630	41571	41587	70962	70962					0.03610990248421331
VLGYSFTSE	9	Unmodified	_VLGYSFTSE_					0	0	0			REV__ENST00000553597.5_1_15:25165166-25166312:+|nuORF	REV__ENST00000553597.5_1_15:25165166-25166312:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	500.7681884765625	2	501.742565	1001.47058	-1.2781	-0.00064129	-1.5132	-0.00075924	-2.7913	-0.0014005	502.2435741906413	54.729	0.35181	54.756	54.568	54.92	0.027142					12	10	2	0	0	0	0.20789	1	4873	4873		18.324	0	1	75270	+		62535	28649	41572	41588	70963	70963					-0.030099314389531173
VLHIKKKQ	8	Unmodified	_VLHIKKKQ_					0	0	0			REV__nc|ENSG00000273345|Q8IVW4-2|CDKL3	REV__nc|ENSG00000273345|Q8IVW4-2|CDKL3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.3305358886719	2	497.332019	992.649485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.723	1	23.68	23.18	24.18	-0.043221								0	0	0	0.30316	1	806	806		42.474	0	1		+		62536	16114	41573	41589	70964	70964					0.15286622710459596
VLHPELGIQ	9	Unmodified	_VLHPELGIQ_					0	0	0		ENST00000493091.5_1_7:99950260-99950701:+|nuORF;ENST00000443526.5_1_7:99950215-99952796:+|nuORF	ENST00000493091.5_1_7:99950260-99950701:+|nuORF	ENST00000493091.5_1_7:99950260-99950701:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	503.29010009765625	2	503.290017	1004.56548	-0.44824	-0.0002256	3.3758	0.001699	2.9276	0.0014734	503.2916446910653	109.63	1.1143	109.75	109.43	110.55	0.12289					97	45	3	0	0	0	0.62081	1	11796	11796		45.952	5.1738	1	1304700			62537	11805	41574	41590	70965	70965					0.06338046822895649
VLHVAYHE	8	Unmodified	_VLHVAYHE_					0	0	0		ENSG00000164411|ENST00000525899|GJB7	ENSG00000164411|ENST00000525899|GJB7	ENSG00000164411|ENST00000525899|GJB7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.28753662109375	2	484.253434	966.492316	-0.090049	-4.3607E-05	-1.2135	-0.00058765	-1.3036	-0.00063125	484.2533785305787	95.084	0.59274	95.152	94.797	95.389	0.068336					19	13	3	0	0	0	0.4196	1	9889	9889		14.664	0	1	46102			62538	5964	41575	41591	70966	70966					0.007729181002673613
VLHYNYTGKLR	11	Unmodified	_VLHYNYTGKLR_					0	0	0		nc|ENSG00000180739|Q9H228-2|S1PR5;ENSG00000180739|ENST00000333430|S1PR5;chr19:10515029-10517824|49|12.14|0.59|4.37|-|ENST00000439028|S1PR5,S1PR5	nc|ENSG00000180739|Q9H228-2|S1PR5	nc|ENSG00000180739|Q9H228-2|S1PR5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.2555236816406	3	455.254216	1362.74082	0.30183	0.00013741	-3.3376	-0.0015195	-3.0358	-0.0013821	455.2529082601906	29.093	0.52753	29.124	28.895	29.422	0.030947					41	19	3	0	0	0	0.71207	1	1410	1410		29.551	6.9892	1	38357			62539	261	41576	41592	70967	70967					0.07395841617130827
VLIAHQFKYK	10	Unmodified	_VLIAHQFKYK_					0	0	0			REV__ENST00000371335.4_1_X:119572920-119573049:-|nuORF	REV__ENST00000371335.4_1_X:119572920-119573049:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.8716430664062	2	623.868966	1245.72338	0.9237	0.00057627	1.3225	0.00082505	2.2462	0.0014013	623.8696844669474	104.46	2.0179	104.58	104.11	106.13	0.11684					143	50	4	0	0	0	0.85466	2	11156	11108;11156		21.96	1.013	1	2763900	+		62540	25683	41577	41593	70968;70969	70969					0.11034546082123597
VLIAKGPTLH	10	Unmodified	_VLIAKGPTLH_					0	0	0			REV__ENST00000370214.8_1_1:94983241-94983295:+|nuORF	REV__ENST00000370214.8_1_1:94983241-94983295:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.82763671875	2	524.829309	1047.64407	-1.5341	-0.00080515	-3.0744	-0.0016135	-4.6085	-0.0024187	524.8276129152192	99.121	3.3448	99.307	98.635	101.98	0.18582					218	79	3	0	0	0	0.8608	1	10411	10411		34.173	3.6689	1	23918000	+		62541	25644	41578	41594	70970	70970					0.12214899127980061
VLIANSAMLCV	11	Unmodified	_VLIANSAMLCV_					0	0	0		ENST00000466066.1_1_1:113202257-113212751:+|nuORF	ENST00000466066.1_1_1:113202257-113212751:+|nuORF	ENST00000466066.1_1_1:113202257-113212751:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.329833984375	2	567.306495	1132.59844	1.7996	0.0010209	-0.75051	-0.00042577	1.0491	0.00059515	567.8084752667805	92.397	0.25677	92.333	92.118	92.375	-0.064148					7	5	2	0	0	0	0.17347	1	9766	9766		29.17	18.305	1	36886			62542	12122	41579	41595	70971	70971					0.03744169559081456
VLIATHPVSLS	11	Unmodified	_VLIATHPVSLS_					0	0	0			REV__ENSG00000109265|ENST00000682029|CRACD	REV__ENSG00000109265|ENST00000682029|CRACD	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8530883789062	2	568.837331	1135.66011	0.52097	0.00029635	-3.3533	-0.0019075	-2.8324	-0.0016111	568.8347886141325	102.37	0.28326	102.56	102.44	102.73	0.19484					9	6	2	0	0	0	0.17529	1	10788	10788		26.693	0	1	94752	+		62543	17753	41580	41596	70972	70972					0.09770560574224874
VLIAVRAK	8	Unmodified	_VLIAVRAK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|67|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2990417480469	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.86294	1	6918	6918		8.8223	0.59103	1	1072400	+		62544	29609	41581	41597	70973	70973					0.14627262273359065
VLIAVTSTL	9	Unmodified	_VLIAVTSTL_					0	0	0			REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|0|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|21	REV__chr12:18143293-18175901|18|19.11|0.0|20.87|-|0|TE_info:HERVIP10FH-int,HERVIP10FH-int_dup273,ERV1,LTR,donor,+,18175901,18178070|RERGL,None|21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	458.78729248046875	2	458.789318	915.564084	-1.7492	-0.00080251	-2.1622	-0.00099198	-3.9114	-0.0017945	458.7883137610394	92.976	2.4972	93.168	92.52	95.017	0.19239					169	59	5	0	0	0	0.67235	1	9375	9375		42.474	0	1	11606000	+		62545	15523	41582	41598	70974	70974					0.10292412734145273
VLIDGSCV	8	Unmodified	_VLIDGSCV_					0	0	0		ENSG00000187527|ENST00000342358|ATP13A5	ENSG00000187527|ENST00000342358|ATP13A5	ENSG00000187527|ENST00000342358|ATP13A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.2091064453125	2	403.209847	804.40514	0.85516	0.00034481	-2.9281	-0.0011806	-2.0729	-0.00083583	403.2085877273137	85.891	2.1457	85.817	85.277	87.423	-0.073761					115	49	4	0	0	0	0.86791	1	8820	8820		28.254	2.8041	1	1526100			62546	7857	41583	41599	70975	70975					-0.004886241656436141
VLIDGSCV	8	Unmodified	_VLIDGSCV_					0	0	0		ENSG00000187527|ENST00000342358|ATP13A5	ENSG00000187527|ENST00000342358|ATP13A5	ENSG00000187527|ENST00000342358|ATP13A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.2093200683594	2	403.209847	804.40514	-1.8542	-0.00074762	-0.040711	-1.6415E-05	-1.8949	-0.00076404	403.2097445210388	85.667	2.0538	85.825	85.416	87.47	0.15851					103	47	4	0	0	0	0.86288	1	8343	8343		26.796	0	1	1256500			62547	7857	41583	41599	70976	70976					-0.004886241656436141
VLIGASFFN	9	Unmodified	_VLIGASFFN_					0	0	0		ENSG00000162694|ENST00000370114|EXTL2	ENSG00000162694|ENST00000370114|EXTL2	ENSG00000162694|ENST00000370114|EXTL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2682189941406	2	484.26601	966.517468	-0.71346	-0.0003455	2.842	0.0013763	2.1285	0.0010308	484.2669858638846	59.258	0.52803	59.649	59.567	60.095	0.39077					21	12	2	0	0	0	0.64922	1	6263	6263		44.117	6.9577	1	2472300			62548	5719	41584	41600	70977	70977					0.03286972902856178
VLIGKTAAHW	10	Unmodified	_VLIGKTAAHW_					0	0	0			REV__ENSG00000157916|ENST00000605895|RER1	REV__ENSG00000157916|ENST00000605895|RER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.31884765625	2	548.319109	1094.62366	0.21619	0.00011854	-1.8033	-0.00098878	-1.5871	-0.00087024	548.3180679357306	109.47	0.36328	109.59	109.45	109.81	0.1229					29	17	2	0	0	0	0.86763	1	11785	11785		26.693	2.1737	1	1143700	+		62549	20572	41585	41601	70978	70978					0.08013728468154113
VLIHKKLLVV	10	Unmodified	_VLIHKKLLVV_					0	0	0			REV__ENST00000581302.5_1_18:21033283-21057068:+|nuORF	REV__ENST00000581302.5_1_18:21033283-21057068:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	581.4050903320312	2	581.407727	1160.8009	0.27248	0.00015842	-3.6485	-0.0021212	-3.376	-0.0019628	581.40539803952	108.96	0.64938	108.99	108.59	109.24	0.034355					68	31	3	0	0	0	0.91289	1	11969	11969		7.1934	0	1	3975600	+		62550	29047	41586	41602	70979	70979					0.22693184018294232
VLIHLLML	8	Unmodified	_VLIHLLML_					0	0	0		nc|ENSG00000100225|Q9Y3I1-3|FBXO7;nc|ENSG00000100225|Q9Y3I1-2|FBXO7;ENSG00000100225|ENST00000266087|FBXO7;ENST00000492535.1_1_22:32875160-32883832:+|nuORF	nc|ENSG00000100225|Q9Y3I1-3|FBXO7	nc|ENSG00000100225|Q9Y3I1-3|FBXO7	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.3041687011719	2	476.306624	950.598695	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.813	1	67.941	67.441	68.441	0.12748								0	0	0	0.30553	1	6077	6077		16.705	0	1				62551	1810	41587	41603	70980	70980					0.12141957341236775
VLIILEVLQ	9	Unmodified	_VLIILEVLQ_					0	0	0		nc|ENSG00000278023|Q8NG50-12|RDM1	nc|ENSG00000278023|Q8NG50-12|RDM1	nc|ENSG00000278023|Q8NG50-12|RDM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.31103515625	2	520.341718	1038.66888	-0.47445	-0.00024688	-1.0868	-0.0005655	-1.5612	-0.00081238	520.3410986891129	47.669	0.29843	48.138	47.971	48.27	0.46941					13	7	3	0	0	0	0.20789	1	4529	4529		35.201	8.4046	1	327150			62552	15317	41588	41604	70981	70981					0.15109534210705533
VLIISQQDQRL	11	Unmodified	_VLIISQQDQRL_					0	0	0			REV__ENSG00000118434|ENST00000237201|SPACA1	REV__ENSG00000118434|ENST00000237201|SPACA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2574157714844	3	438.257626	1311.75105	-1.2137	-0.00053193	1.0715	0.00046958	-0.14227	-6.235E-05	438.25809944136427	29.692	1.312	29.713	29.307	30.619	0.020784					97	29	5	0	0	0	0.71207	1	1965	1965		29.551	2.5034	1	6019900	+		62553	18311	41589	41605	70982	70982					0.10764404551696316
VLIITLVFTTV	11	Unmodified	_VLIITLVFTTV_					0	0	0			REV__ENSG00000170412|ENST00000392627|GPRC5C	REV__ENSG00000170412|ENST00000392627|GPRC5C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2485656738281	3	406.928447	1217.76351	-1.8142	-0.00073823	4.3787	0.0017818	2.5646	0.0010436	407.26557380825204	88.245	0.1571	88.447	88.346	88.503	0.20114					5	3	2	0	0	0	0.17606	1	8740	8740		25.126	0.89417	1	53210	+		62554	21658	41590	41606	70983	70983					0.1633404796200466
VLIKHEKTHI	10	Unmodified	_VLIKHEKTHI_					0	0	0		nc|ENSG00000161551|Q9BSK1-2|ZNF577;ENSG00000161551|ENST00000638348|ZNF577	nc|ENSG00000161551|Q9BSK1-2|ZNF577	nc|ENSG00000161551|Q9BSK1-2|ZNF577	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.5836181640625	3	406.583674	1216.72919	3.1806	0.0012932	-2.547	-0.0010356	0.6336	0.00025761	406.5823777958884	112.82	1.2516	112.85	112.71	113.96	0.028854					79	33	3	0	0	0	0.85441	1	12333	12333		20.837	4.8304	1	2434900			62555	5641	41591	41607	70984	70984					0.12949644593800258
VLIKHEKTHI	10	Unmodified	_VLIKHEKTHI_					0	0	0		nc|ENSG00000161551|Q9BSK1-2|ZNF577;ENSG00000161551|ENST00000638348|ZNF577	nc|ENSG00000161551|Q9BSK1-2|ZNF577	nc|ENSG00000161551|Q9BSK1-2|ZNF577	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2480773925781	3	406.583674	1216.72919	-1.7909	-0.00072815	2.5775	0.001048	0.78656	0.0003198	406.919110650769	111.13	0.12119	111.24	111.16	111.28	0.11118					5	4	2	0	0	0	0.37624	1	11970	11970		20.03	0	1	8265.5			62556	5641	41591	41607	70985	70985					0.12949644593800258
VLIKHEKTHI	10	Unmodified	_VLIKHEKTHI_					0	0	0		nc|ENSG00000161551|Q9BSK1-2|ZNF577;ENSG00000161551|ENST00000638348|ZNF577	nc|ENSG00000161551|Q9BSK1-2|ZNF577	nc|ENSG00000161551|Q9BSK1-2|ZNF577	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5838623046875	3	406.583674	1216.72919	3.1308	0.0012729	-2.164	-0.00087985	0.96679	0.00039308	406.5827071519945	112.24	0.82966	112.27	112.06	112.89	0.030602					58	32	2	0	0	0	0.85285	1	13614	13614		16.717	0	1	1459000			62557	5641	41591	41607	70986	70986					0.12949644593800258
VLIKLVSELGE	11	Unmodified	_VLIKLVSELGE_					0	0	0			REV__ENSG00000173801|ENST00000393931|JUP	REV__ENSG00000173801|ENST00000393931|JUP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5797119140625	3	400.579706	1198.71729	3.1805	0.001274	-1.4901	-0.00059689	1.6904	0.00067715	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.72374	1	12461	12461		27.644	3.1247	1	4827300	+		62558	21952	41592	41608	70987	70987					0.1258798305993878
VLILEKNHTN	10	Unmodified	_VLILEKNHTN_					0	0	0		ENST00000368886.9_1_10:124754038-124754206:-|nuORF	ENST00000368886.9_1_10:124754038-124754206:-|nuORF	ENST00000368886.9_1_10:124754038-124754206:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8670043945312	2	590.837862	1179.66117	-0.77897	-0.00046025	-0.61915	-0.00036582	-1.3981	-0.00082607	590.8386310919766	103.31	0.72266	103.35	103.24	103.96	0.041481					26	17	2	0	0	0	0.37624	1	11250	11250		58.23	10.573	1	376500			62559	10606	41593	41609	70988	70988					0.07852774943148688
VLILFSFPL	9	Unmodified	_VLILFSFPL_					0	0	0			REV__ENST00000586276.5_1_17:42931463-42937758:-|nuORF	REV__ENST00000586276.5_1_17:42931463-42937758:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.8275756835938	2	524.825704	1047.63685	-0.038995	-2.0466E-05	2.2661	0.0011893	2.2272	0.0011689	524.8268048539485	99.404	3.5304	99.454	98.661	102.19	0.049828					345	82	7	0	0	0	0.77546	1	10689	10689		31.955	0	1	26414000	+		62560	29102	41594	41610	70989	70989					0.1149416652756372
VLILFSFPL	9	Unmodified	_VLILFSFPL_					0	0	0			REV__ENST00000586276.5_1_17:42931463-42937758:-|nuORF	REV__ENST00000586276.5_1_17:42931463-42937758:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8262329101562	2	524.825704	1047.63685	0.8139	0.00042716	1.4579	0.00076513	2.2718	0.0011923	524.826378174465	99.097	3.4099	99.253	98.634	102.04	0.15659					300	80	5	0	0	0	0.7932	1	10680	10680		25.45	2.4077	1	27719000	+		62561	29102	41594	41610	70990	70990					0.1149416652756372
VLILIMAEM	9	Unmodified	_VLILIMAEM_					0	0	0			REV__ENST00000359204.4_1_10:95457906-95462310:-|nuORF	REV__ENST00000359204.4_1_10:95457906-95462310:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7936401367188	2	516.795232	1031.57591	-1.5008	-0.00077558	-2.2124	-0.0011434	-3.7132	-0.001919	516.7939962444509	86.285	2.6644	86.444	84.762	87.426	0.15851					129	61	3	0	0	0	0.77546	1	8401	8401		31.955	7.7521	1	241060	+		62562	25454	41595	41611	70991	70991					0.061385701614653954
VLILLLIPLKD	11	Unmodified	_VLILLLIPLKD_					0	0	0		ENSG00000139370|ENST00000266771|SLC15A4;nc|ENSG00000139370|Q8N697-2|SLC15A4	ENSG00000139370|ENST00000266771|SLC15A4	ENSG00000139370|ENST00000266771|SLC15A4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.28924560546875	3	417.287975	1248.8421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.771	1	71.811	71.311	72.311	0.040222								0	0	0	0.56276	1	6891	6891		17.167	5.2344	1				62563	4367	41596	41612	70992	70992					0.22762900267116493
VLILLLIPLKD	11	Unmodified	_VLILLLIPLKD_					0	0	0		ENSG00000139370|ENST00000266771|SLC15A4;nc|ENSG00000139370|Q8N697-2|SLC15A4	ENSG00000139370|ENST00000266771|SLC15A4	ENSG00000139370|ENST00000266771|SLC15A4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.28887939453125	3	417.287975	1248.8421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.299	1	72.341	71.841	72.841	0.042114								0	0	0	0.56276	1	6951	6951		8.7993	0	1				62564	4367	41596	41612	70993	70993					0.22762900267116493
VLILNVTG	8	Unmodified	_VLILNVTG_					0	0	0		ENST00000395850.7_1_11:33730823-33730895:-|nuORF	ENST00000395850.7_1_11:33730823-33730895:-|nuORF	ENST00000395850.7_1_11:33730823-33730895:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	414.7618408203125	2	414.763104	827.511654	-0.18703	-7.7573E-05	-3.202	-0.0013281	-3.389	-0.0014056	414.7617349673395	88.474	3.4521	88.542	87.228	90.68	0.068161					244	80	5	0	0	0	0.90465	1	9113	9113		40.573	1.7665	1	13272000			62565	11101	41597	41613	70994	70994					0.09099874391199592
VLILTLFCP	9	Unmodified	_VLILTLFCP_					0	0	0		ENST00000585386.1_1_19:46145287-46148597:-|nuORF	ENST00000585386.1_1_19:46145287-46148597:-|nuORF	ENST00000585386.1_1_19:46145287-46148597:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.8055725097656	2	509.803914	1017.59328	0.68681	0.00035014	-1.1006	-0.00056107	-0.41376	-0.00021094	509.80326235241614	86.403	4.313	86.552	84.994	89.307	0.14902					345	101	5	0	0	0	0.7932	1	8364	8364		26.796	0	1	3017600			62566	14146	41598	41614	70995	70995					0.08518233758763927
VLILTRAAIPS	11	Unmodified	_VLILTRAAIPS_					0	0	0			REV__ENSG00000145715|ENST00000274376|RASA1;REV__ENST00000515800.6_1_5:86667940-86686697:+|nuORF	REV__ENSG00000145715|ENST00000274376|RASA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.3662109375	2	577.368798	1152.72304	-0.96039	-0.0005545	-2.9913	-0.0017271	-3.9517	-0.0022816	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.69248	1	11028	11028		32.751	4.8683	1	9850700	+		62567	19959;28041	41599	41615	70996	70996					0.1527912636227029
VLIMKMIF	8	Unmodified	_VLIMKMIF_					0	0	0			REV__ENST00000396136.6_1_15:58968480-58971397:-|nuORF	REV__ENST00000396136.6_1_15:58968480-58971397:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	497.7958984375	2	497.795035	993.575517	-0.62467	-0.00031096	2.332	0.0011609	1.7073	0.0008499	497.7959443257759	48.896	1.0734	48.921	48.637	49.71	0.025574					60	26	3	0	0	0	0.89457	1	3797	3797		37.028	7.1869	1	414050	+		62568	26136	41600	41616	70997	70997					0.07847195232284321
VLINIILSLVK	11	Unmodified	_VLINIILSLVK_					0	0	0		ENST00000465643.1_1_7:40132349-40134576:+|nuORF	ENST00000465643.1_1_7:40132349-40134576:+|nuORF	ENST00000465643.1_1_7:40132349-40134576:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	613.3834838867188	2	612.918124	1223.8217	-0.12375	-7.5847E-05	-3.3275	-0.0020395	-3.4513	-0.0021153	613.4194825946972	104.56	0.43124	104.56	104.31	104.75	0					14	10	2	0	0	0	0.17382	1	10772	10772		21.686	15.373	1	104040			62569	12114	41601	41617	70998	70998					0.21873729607318637
VLINKVVETVK	11	Unmodified	_VLINKVVETVK_					0	0	0		nc|ENSG00000102804|Q15714-4|TSC22D1;ENSG00000102804|ENST00000458659|TSC22D1	nc|ENSG00000102804|Q15714-4|TSC22D1	nc|ENSG00000102804|Q15714-4|TSC22D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3927001953125	2	621.395013	1240.77547	0.6984	0.00043398	-4.3508	-0.0027036	-3.6524	-0.0022696	621.3922056168815	104.57	2.6797	104.61	104.09	106.77	0.039856					250	63	5	0	0	0	0.7342	1	11436	11436		25.574	2.5316	1	13976000			62570	2021	41602	41618	70999	70999					0.16471664705204603
VLIPILQVL	9	Unmodified	_VLIPILQVL_					0	0	0			REV__nc|ENSG00000105576|O14787-2|TNPO2	REV__nc|ENSG00000105576|O14787-2|TNPO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.34564208984375	2	504.346803	1006.67905	0.5395	0.00027209	-1.2865	-0.00064886	-0.74703	-0.00037676	504.3448506264481	52.564	2.2272	53.179	51.801	54.028	0.61436					96	53	3	0	0	0	0.7932	1	5325	5325		19.36	0	1	616280	+		62571	17553	41603	41619	71000	71000					0.17598141935934564
VLIPLLSN	8	Unmodified	_VLIPLLSN_					0	0	0			REV__nc|ENSG00000235931|A4QN01|LINC01553	REV__nc|ENSG00000235931|A4QN01|LINC01553	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2522888183594	2	434.778754	867.542954	-0.1662	-7.2259E-05	3.2692	0.0014214	3.103	0.0013491	434.7800255716412	92.886	0.70367	92.956	92.713	93.416	0.06987					21	16	2	0	0	0	0.4196	1	9637	9637		24.203	0	1	62371	+		62572	30225	41604	41620	71001	71001					0.10388447425282266
VLIPLLSN	8	Unmodified	_VLIPLLSN_					0	0	0			REV__nc|ENSG00000235931|A4QN01|LINC01553	REV__nc|ENSG00000235931|A4QN01|LINC01553	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7786865234375	2	434.778754	867.542954	0.76603	0.00033306	3.2628	0.0014186	4.0288	0.0017516	434.77972097925357	57.028	2.3704	57.061	56.581	58.952	0.033184					147	79	3	0	0	0	0.82658	1	5291	5291		21.96	2.5999	1	337650	+		62573	30225	41604	41620	71002	71002					0.10388447425282266
VLIQKKDM	8	Unmodified	_VLIQKKDM_					0	0	0		L1ME1_dup16259|chr9:36681915-36682464:-|1.1653022257669774|0.0148250137166571|6.3|63.0|8|2|sense	L1ME1_dup16259|chr9:36681915-36682464:-|1.1653022257669774|0.0148250137166571|6.3|63.0|8|2|sense	L1ME1_dup16259|chr9:36681915-36682464:-|1.1653022257669774|0.0148250137166571|6.3|63.0|8|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.79071044921875	2	487.788795	973.563038	0.84663	0.00041298	2.8765	0.0014031	3.7232	0.0018161	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.85277	1	8686	8686		25.45	2.4077	1	2238600			62574	14599	41605	41621	71003	71003					0.0751987509358969
VLIQKNLGPK	10	Unmodified	_VLIQKNLGPK_					0	0	0		ENST00000506157.1_1_4:2889441-2900342:+|nuORF;ENST00000508684.5_1_4:2877642-2900342:+|nuORF;ENST00000509039.5_1_4:2877642-2901297:+|nuORF;nc|ENSG00000087274|P35611-5|ADD1;ENST00000503169.5_1_4:2877642-2906862:+|nuORF;nc|ENSG00000087274|P35611-2|ADD1;nc|ENSG00000087274|P35611-6|ADD1;nc|ENSG00000087274|P35611-4|ADD1;nc|ENSG00000087274|P35611|ADD1;nc|ENSG00000087274|P35611-3|ADD1;ENSG00000087274|ENST00000683351|ADD1	ENST00000506157.1_1_4:2889441-2900342:+|nuORF	ENST00000506157.1_1_4:2889441-2900342:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	555.35302734375	2	555.355691	1108.69683	-1.4347	-0.00079677	-2.9865	-0.0016585	-4.4211	-0.0024553	555.3539091527371	100.83	2.5385	101	100.55	103.08	0.17139					185	62	5	0	0	0	0.86452	1	10538	10538		30.504	0.18592	1	5963400			62575	1575	41606	41622	71004	71004					0.14682857190791765
VLIQNKPKTL	10	Unmodified	_VLIQNKPKTL_					0	0	0		ENST00000375754.8_1_9:93658667-93658919:+|nuORF	ENST00000375754.8_1_9:93658667-93658919:+|nuORF	ENST00000375754.8_1_9:93658667-93658919:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3670043945312	2	577.368798	1152.72304	-1.363	-0.00078696	-2.7149	-0.0015675	-4.0779	-0.0023544	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.85251	1	10844	10844		19.997	5.8596	1	14386000			62576	10807	41607	41623	71005	71005					0.1527912636227029
VLISVFVP	8	Unmodified	_VLISVFVP_					0	0	0		ENST00000371817.7_1_9:137735554-137735686:+|nuORF	ENST00000371817.7_1_9:137735554-137735686:+|nuORF	ENST00000371817.7_1_9:137735554-137735686:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77374267578125	2	437.275847	872.537141	-1.6216	-0.00070911	0.38455	0.00016815	-1.2371	-0.00054095	437.27511240044737	26.413	0.1765	26.48	26.38	26.556	0.066877					13	8	2	0	0	0	0.4196	1	1004	1004		20.482	0	1	37001			62577	10677	41608	41624	71006	71006					0.09577348913614969
VLISVGWFLMA	11	Unmodified	_VLISVGWFLMA_					0	0	0			REV__ENST00000379095.4_1_15:90818360-90818948:+|nuORF	REV__ENST00000379095.4_1_15:90818360-90818948:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.3462524414062	2	618.346477	1234.6784	-0.32375	-0.00020019	-0.55442	-0.00034282	-0.87817	-0.00054302	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.71452	1	10421	10421		29.15	1.2673	1	926440	+		62578	25910	41609	41625	71007	71007					0.07044979224588133
VLISVTILY	9	Unmodified	_VLISVTILY_					0	0	0		nc|ENSG00000182489|Q6PP77-2|XKRX;ENSG00000182489|ENST00000372956|XKRX	nc|ENSG00000182489|Q6PP77-2|XKRX	nc|ENSG00000182489|Q6PP77-2|XKRX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8202209472656	2	510.820618	1019.62668	1.5123	0.00077251	-2.2629	-0.0011559	-0.75057	-0.00038341	510.81939038827716	94.589	0.80517	95.022	94.713	95.518	0.4324					51	18	4	0	0	0	0.39977	1	11312	11312		57.811	5.5121	1	731510			62579	7458	41610	41626	71008	71008					0.11765558802335363
VLITHGTLVIT	11	Unmodified	_VLITHGTLVIT_					0	0	0		ENST00000471963.6_1_3:112968649-112990141:+|nuORF;nc|ENSG00000144857|Q9BWV1|BOC;ENSG00000144857|ENST00000682979|BOC	ENST00000471963.6_1_3:112968649-112990141:+|nuORF	ENST00000471963.6_1_3:112968649-112990141:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	583.8587646484375	2	583.860806	1165.70706	0.86529	0.00050521	-4.0365	-0.0023567	-3.1712	-0.0018515	583.8582639221804	98.476	1.8471	98.633	98.188	100.03	0.15659					108	42	5	0	0	0	0.69995	1	10251	10251		31.53	3.6476	1	894230			62580	4739	41611	41627	71009	71009					0.13083420125371958
VLITKPTT	8	Unmodified	_VLITKPTT_					0	0	0		nc|ENSG00000157617|Q9Y426-2|C2CD2;nc|ENSG00000157617|Q9Y426-3|C2CD2;ENSG00000157617|ENST00000380486|C2CD2	nc|ENSG00000157617|Q9Y426-2|C2CD2	nc|ENSG00000157617|Q9Y426-2|C2CD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.77484130859375	2	436.776211	871.537869	0.90159	0.00039379	-3.9864	-0.0017412	-3.0848	-0.0013474	436.7743718767523	90.506	2.2468	90.957	90.49	92.737	0.45058					142	53	4	0	0	0	0.884	1	10695	10695		33.516	0	1	8766100			62581	5442	41612	41628	71010	71010					0.0969614356264401
VLITSLTIP	9	Unmodified	_VLITSLTIP_					0	0	0		ENST00000489643.6_1_9:34649384-34650059:+|nuORF	ENST00000489643.6_1_9:34649384-34650059:+|nuORF	ENST00000489643.6_1_9:34649384-34650059:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8045959472656	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.7932	1	2345	2345		23.042	2.0956	1	336090			62582	12656	41613	41629	71011	71011					0.11580985768216578
VLIVDPDIG	9	Unmodified	_VLIVDPDIG_					0	0	0			REV__chr2:131492024-131492213|23|22.26|0.18|6.92|-|1|MZT2A,None|1	REV__chr2:131492024-131492213|23|22.26|0.18|6.92|-|1|MZT2A,None|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7691955566406	2	470.771126	939.527698	-1.6346	-0.00076952	-2.724	-0.0012824	-4.3586	-0.0020519	470.7696954540394	50.712	1.3661	50.712	50.295	51.661	0					80	35	3	0	0	0	0.43338	1	4159	4159		55.504	6.2934	1	1359900	+		62583	15733	41614	41630	71012	71012					0.0555153583743504
VLIVDPDIG	9	Unmodified	_VLIVDPDIG_					0	0	0			REV__chr2:131492024-131492213|23|22.26|0.18|6.92|-|1|MZT2A,None|1	REV__chr2:131492024-131492213|23|22.26|0.18|6.92|-|1|MZT2A,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	470.76922607421875	2	470.771126	939.527698	-0.63239	-0.00029771	-3.9276	-0.001849	-4.56	-0.0021467	470.76915727840577	53.14	1.9163	53.116	52.621	54.537	-0.023922					112	49	3	0	0	0	0.69914	1	4697	4697		40.573	1.7665	1	1468500	+		62584	15733	41614	41630	71013	71013					0.0555153583743504
VLIVILLPV	9	Unmodified	_VLIVILLPV_					0	0	0			REV__ENSG00000140274|ENST00000323030|DUOXA2	REV__ENSG00000140274|ENST00000323030|DUOXA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.84967041015625	2	489.851722	977.68889	-1.9466	-0.00095355	-0.91381	-0.00044763	-2.8604	-0.0014012	489.851143534177	75.085	0.78783	75.13	74.842	75.63	0.04509					33	21	2	0	0	0	0.7932	1	7296	7296		21.702	7.0382	1	116340	+		62585	19603	41615	41631	71014	71014					0.19915329941341042
VLIVLPEGVS	10	Unmodified	_VLIVLPEGVS_					0	0	0			REV__ENST00000343979.5_1_19:12299097-12299355:+|nuORF	REV__ENST00000343979.5_1_19:12299097-12299355:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.315673828125	2	513.3157	1024.61685	-1.3651	-0.00070072	3.5186	0.0018062	2.1536	0.0011055	513.3175456130648	53.876	2.1608	53.876	52.509	54.67	0					97	64	3	0	0	0	0.86589	1	4548	4548		29.15	1.2673	1	276500	+		62586	25299	41616	41632	71015	71015					0.10552370796949617
VLIVTYSILL	10	Unmodified	_VLIVTYSILL_					0	0	0			REV__ENSG00000141194|ENST00000268912|OR4D1	REV__ENSG00000141194|ENST00000268912|OR4D1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.36328125	2	567.36265	1132.71075	-0.82344	-0.00046719	2.4008	0.0013621	1.5773	0.00089493	567.3638410249442	44.579	2.1787	44.545	43.955	46.134	-0.03347					156	50	5	0	0	0	0.86589	1	3598	3598		29.15	1.2673	1	2613600	+		62587	19666	41617	41633	71016	71016					0.1497008989922506
VLIVTYSILL	10	Unmodified	_VLIVTYSILL_					0	0	0			REV__ENSG00000141194|ENST00000268912|OR4D1	REV__ENSG00000141194|ENST00000268912|OR4D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3630981445312	2	567.36265	1132.71075	0.39672	0.00022508	1.2522	0.00071043	1.6489	0.00093552	567.363221347754	44.24	2.8558	44.249	42.808	45.664	0.0084534					165	70	4	0	0	0	0.86201	2	3113	3113;3182		30.504	6.3009	1	1167000	+		62588	19666	41617	41633	71017;71018	71017					0.1497008989922506
VLIVTYSILL	10	Unmodified	_VLIVTYSILL_					0	0	0			REV__ENSG00000141194|ENST00000268912|OR4D1	REV__ENSG00000141194|ENST00000268912|OR4D1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.363525390625	2	567.36265	1132.71075	0.36025	0.00020439	1.3571	0.00076996	1.7173	0.00097435	567.3632714206227	44.36	2.296	44.409	43.67	45.966	0.048996					151	56	4	0	0	0	0.85939	1	3204	3204		23.042	0	1	1558100	+		62589	19666	41617	41633	71019	71019					0.1497008989922506
VLIVTYSILL	10	Unmodified	_VLIVTYSILL_					0	0	0			REV__ENSG00000141194|ENST00000268912|OR4D1	REV__ENSG00000141194|ENST00000268912|OR4D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3629150390625	2	567.36265	1132.71075	-1.4485	-0.00082182	2.3813	0.001351	0.93278	0.00052922	567.3639779227798	42.372	2.1865	42.806	41.562	43.749	0.4334					145	55	5	0	0	0	0.86201	1	3831	3831		24.203	0	1	13610000	+		62590	19666	41617	41633	71020	71020					0.1497008989922506
VLIVTYSILL	10	Unmodified	_VLIVTYSILL_					0	0	0			REV__ENSG00000141194|ENST00000268912|OR4D1	REV__ENSG00000141194|ENST00000268912|OR4D1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3633422851562	2	567.36265	1132.71075	-0.94241	-0.00053469	1.9029	0.0010796	0.96052	0.00054496	567.3637060270148	42.168	1.9304	42.865	42.418	44.348	0.69754					144	47	5	0	0	0	0.86452	1	3839	3839		30.504	0	1	16501000	+		62591	19666	41617	41633	71021	71021					0.1497008989922506
VLIYFLIKG	9	Unmodified	_VLIYFLIKG_					0	0	0		ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.3394775390625	2	533.338978	1064.6634	-0.59229	-0.00031589	3.0607	0.0016324	2.4684	0.0013165	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.7932	1	10131	10131		19.36	2.8868	1	1199500			62592	13952	41618	41634	71022	71022					0.133658554188969
VLIYFLIKG	9	Unmodified	_VLIYFLIKG_					0	0	0		ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	533.3399047851562	2	533.338978	1064.6634	1.2441	0.00066355	1.0363	0.00055269	2.2804	0.0012162	533.3394000177375	99.114	2.7086	99.162	98.677	101.39	0.047531					171	63	4	0	0	0	0.7932	1	10692	10692		12.959	4.1369	1	3009900			62593	13952	41618	41634	71023	71023					0.133658554188969
VLIYFLIKG	9	Unmodified	_VLIYFLIKG_					0	0	0		ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.3396606445312	2	533.338978	1064.6634	-0.0064483	-3.4392E-06	2.1801	0.0011627	2.1736	0.0011593	533.3400284044101	98.996	2.9551	99.219	98.699	101.65	0.22262					166	70	4	0	0	0	0.7932	2	10375	10290;10375		19.36	10.538	1	2531600			62594	13952	41618	41634	71024;71025	71025					0.133658554188969
VLIYFLIKG	9	Unmodified	_VLIYFLIKG_					0	0	0		ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	533.3392333984375	2	533.338978	1064.6634	0.82147	0.00043812	1.5391	0.00082084	2.3605	0.001259	533.3397014288719	99.113	2.1038	99.27	98.724	100.83	0.15659					144	48	4	0	0	0	0.76996	3	10402	10282;10365;10402		33.516	14.156	1	2216600			62595	13952	41618	41634	71026;71027;71028	71028					0.133658554188969
VLIYFLIKG	9	Unmodified	_VLIYFLIKG_					0	0	0		ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.3401489257812	2	533.338978	1064.6634	-1.5064	-0.00080343	3.8312	0.0020433	2.3248	0.0012399	533.3409139496441	99.132	2.1048	99.317	98.763	100.87	0.18582					141	48	4	0	0	0	0.7932	1	10274	10274		18.324	0.95945	1	1837700			62596	13952	41618	41634	71029	71029					0.133658554188969
VLIYFLIKG	9	Unmodified	_VLIYFLIKG_					0	0	0		ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.3394775390625	2	533.338978	1064.6634	1.7726	0.00094538	1.0666	0.00056887	2.8392	0.0015142	533.3394684575402	98.908	1.4701	99.269	98.774	100.24	0.36137					81	36	3	0	0	0	0.7932	1	11927	11927		17.365	3.5896	1	1093200			62597	13952	41618	41634	71030	71030					0.133658554188969
VLIYFLIKG	9	Unmodified	_VLIYFLIKG_					0	0	0		ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	ENST00000567806.1_1_16:27471942-27472230:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.3402099609375	2	533.338978	1064.6634	1.5408	0.00082178	1.186	0.00063251	2.7268	0.0014543	533.3395224888457	98.979	2.0217	99.342	98.893	100.91	0.36292					99	50	3	0	0	0	0.7932	1	11961	11961		18.324	2.6826	1	1206500			62598	13952	41618	41634	71031	71031					0.133658554188969
VLIYHTDINIL	11	Unmodified	_VLIYHTDINIL_					0	0	0		ENSG00000102753|ENST00000261667|KPNA3	ENSG00000102753|ENST00000261667|KPNA3	ENSG00000102753|ENST00000261667|KPNA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.58636474609375	3	438.586972	1312.73909	-1.584	-0.00069474	-1.2869	-0.00056442	-2.871	-0.0012592	438.5863355487925	32.045	0.80102	32.103	31.818	32.619	0.058319					85	39	3	0	0	0	0.74022	1	1498	1498		24.232	0.85391	1	359140			62599	2014	41619	41635	71032	71032					0.09522787808532485
VLKAAGSKT	9	Unmodified	_VLKAAGSKT_					0	0	0			REV__nc|ENSG00000005981|Q9Y574-2|ASB4	REV__nc|ENSG00000005981|Q9Y574-2|ASB4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7713928222656	2	437.77146	873.528367	0.14778	6.4694E-05	-0.80508	-0.00035244	-0.6573	-0.00028775	437.771320995264	36.634	1.7197	36.916	36.638	38.358	0.28173					136	42	4	0	0	0	0.7932	1	2899	2899		14.865	2.658	1	9763800	+		62600	16093	41620	41636	71033	71033					0.08654375277126292
VLKAAGSKT	9	Unmodified	_VLKAAGSKT_					0	0	0			REV__nc|ENSG00000005981|Q9Y574-2|ASB4	REV__nc|ENSG00000005981|Q9Y574-2|ASB4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7714538574219	2	437.77146	873.528367	-0.63876	-0.00027963	0.070293	3.0772E-05	-0.56847	-0.00024886	437.77162175664915	38.677	1.0193	39.199	38.87	39.89	0.52235					96	23	6	0	0	0	0.7932	1	3265	3265		15.642	0.77694	1	19739000	+		62601	16093	41620	41636	71034	71034					0.08654375277126292
VLKCDEKAKFV	11	Unmodified	_VLKCDEKAKFV_					0	0	0		ENSG00000260314|ENST00000569591|MRC1	ENSG00000260314|ENST00000569591|MRC1	ENSG00000260314|ENST00000569591|MRC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3585205078125	2	640.357573	1278.70059	-0.024279	-1.5547E-05	2.2238	0.001424	2.1995	0.0014085	640.3589287078105	99.718	2.6088	99.718	98.716	101.32	0					151	61	3	0	0	0	0.638	2	10061	10061;10175		40.058	8.1116	1	448130			62602	8918	41621	41637	71035;71036	71035					0.07239158902302734
VLKCDEKAKFV	11	Unmodified	_VLKCDEKAKFV_					0	0	0		ENSG00000260314|ENST00000569591|MRC1	ENSG00000260314|ENST00000569591|MRC1	ENSG00000260314|ENST00000569591|MRC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.3610229492188	2	640.357573	1278.70059	-1.1585	-0.00074183	3.0988	0.0019844	1.9404	0.0012425	640.3594398218631	99.341	2.5092	99.527	98.68	101.19	0.18581					187	58	4	0	0	0	0.68532	1	10402	10402		33.922	2.3918	1	585260			62603	8918	41621	41637	71037	71037					0.07239158902302734
VLKCLRRM	8	Unmodified	_VLKCLRRM_					0	0	0		ENST00000588075.5_3_17:76993904-76996331:-|nuORF;ENST00000586916.6_1_17:76993962-76996331:-|nuORF;ENST00000588611.5_1_17:76993706-77001537:-|nuORF	ENST00000588075.5_3_17:76993904-76996331:-|nuORF	ENST00000588075.5_3_17:76993904-76996331:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8044128417969	2	509.804257	1017.59396	-0.71562	-0.00036483	0.35273	0.00017983	-0.36289	-0.000185	509.8042530749235	99.723	0.85551	99.723	99.348	100.2	0					47	20	3	0	0	0	0.81548	1	10064	10064		20.482	0	1	277710			62604	14180	41622	41638	71038	71038					0.08586749926826087
VLKDEAVWKKP	11	Unmodified	_VLKDEAVWKKP_					0	0	0		nc|ENSG00000205702|A0A087X1C5|CYP2D7	nc|ENSG00000205702|A0A087X1C5|CYP2D7	nc|ENSG00000205702|A0A087X1C5|CYP2D7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2577209472656	3	438.258967	1311.75507	-2.0264	-0.0008881	-0.89646	-0.00039288	-2.9229	-0.001281	438.2585447663128	30.099	0.96018	30.099	29.739	30.699	0					100	33	5	0	0	0	0.66009	2	1336	1328;1336		37.508	6.9393	1	863580			62605	15222	41623	41639	71039;71040	71040					0.11166494045392028
VLKDEAVWKKP	11	Unmodified	_VLKDEAVWKKP_					0	0	0		nc|ENSG00000205702|A0A087X1C5|CYP2D7	nc|ENSG00000205702|A0A087X1C5|CYP2D7	nc|ENSG00000205702|A0A087X1C5|CYP2D7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2567138671875	3	438.258967	1311.75507	-0.33086	-0.000145	-2.5469	-0.0011162	-2.8778	-0.0012612	438.2577888562839	29.898	1.7233	29.855	29.533	31.256	-0.043093					114	42	4	0	0	0	0.73277	1	1575	1575		25.892	2.5138	1	610700			62606	15222	41623	41639	71041	71041					0.11166494045392028
VLKDEAVWKKP	11	Unmodified	_VLKDEAVWKKP_					0	0	0		nc|ENSG00000205702|A0A087X1C5|CYP2D7	nc|ENSG00000205702|A0A087X1C5|CYP2D7	nc|ENSG00000205702|A0A087X1C5|CYP2D7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2582702636719	3	438.258967	1311.75507	0.25686	0.00011257	-2.8825	-0.0012633	-2.6256	-0.0011507	438.25763532850164	29.855	0.59691	29.866	29.546	30.143	0.01123					91	29	5	0	0	0	0.70584	1	1290	1290		30.569	2.9249	1	489580			62607	15222	41623	41639	71042	71042					0.11166494045392028
VLKDRLTGLHK	11	Unmodified	_VLKDRLTGLHK_					0	0	0		ENST00000379915.4_1_15:72581750-72612068:-|nuORF;nc|ENSG00000140488|Q96J87-3|CELF6;ENSG00000140488|ENST00000287202|CELF6	ENST00000379915.4_1_15:72581750-72612068:-|nuORF	ENST00000379915.4_1_15:72581750-72612068:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.8964233398438	2	640.395879	1278.7772	-0.70367	-0.00045063	-3.5698	-0.0022861	-4.2735	-0.0027367	640.3935337179228	53.682	0.9059	53.657	53.238	54.144	-0.024754					44	21	3	0	0	0	0.67778	1	4812	4812		35.152	4.8343	1	128690			62608	4438	41624	41640	71043	71043					0.14896718513818996
VLKGSHVQ	8	Unmodified	_VLKGSHVQ_					0	0	0			REV__nc|ENSG00000161533|Q15067-3|ACOX1	REV__nc|ENSG00000161533|Q15067-3|ACOX1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.78021240234375	2	434.255977	866.497401	1.6712	0.00072573	-2.5148	-0.0010921	-0.84358	-0.00036633	434.25553820155477	36.54	0.24351	36.981	36.871	37.115	0.44043					8	5	3	0	0	0	0.4196	1	2912	2912		16.473	0	1	32999	+		62609	20767	41625	41641	71044	71044					0.05881221962897598
VLKGSKLH	8	Unmodified	_VLKGSKLH_					0	0	0		ENSG00000118193|ENST00000367350|KIF14	ENSG00000118193|ENST00000367350|KIF14	ENSG00000118193|ENST00000367350|KIF14	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.282470703125	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.672	1	40.678	40.178	41.178	0.0065727								0	0	0	0.30252	1	2942	2942		19.36	0	1				62610	3016	41626	41642	71045	71045					0.10438385376642145
VLKHKYMQ	8	Unmodified	_VLKHKYMQ_					0	0	0			REV__ENST00000440787.5_1_3:9845376-9847896:+|nuORF	REV__ENST00000440787.5_1_3:9845376-9847896:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.7940673828125	2	523.794412	1045.57427	-1.7952	-0.00094032	0.52905	0.00027711	-1.2662	-0.00066321	523.794559168707	18.846	0.70105	18.846	18.709	19.41	0					33	23	2	0	0	0	0.86288	1	352	352		26.796	2.2769	1	67478	+		62611	23821	41627	41643	71046	71046					0.053306971877191245
VLKHLCFLMLP	11	Unmodified	_VLKHLCFLMLP_					0	0	0		ENST00000389682.7_1_2:122523526-122523658:+|nuORF	ENST00000389682.7_1_2:122523526-122523658:+|nuORF	ENST00000389682.7_1_2:122523526-122523658:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.5857238769531	3	438.587262	1312.73996	-1.997	-0.00087587	-1.6333	-0.00071637	-3.6304	-0.0015922	438.58651601334884	31.993	0.97123	31.993	31.701	32.672	0					74	39	2	0	0	0	0.69931	1	1580	1580		31.634	2.0835	1	798930			62612	10992	41628	41644	71047	71047					0.09609587652221308
VLKHLCFLMLP	11	Unmodified	_VLKHLCFLMLP_					0	0	0		ENST00000389682.7_1_2:122523526-122523658:+|nuORF	ENST00000389682.7_1_2:122523526-122523658:+|nuORF	ENST00000389682.7_1_2:122523526-122523658:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.58575439453125	3	438.587262	1312.73996	0.11756	5.1558E-05	-3.7181	-0.0016307	-3.6006	-0.0015792	438.5855891612591	31.805	0.71013	31.916	31.605	32.316	0.11117					105	33	4	0	0	0	0.68532	2	1479	1474;1479		33.922	2.2874	1	385090			62613	10992	41628	41644	71048;71049	71049					0.09609587652221308
VLKKIKCYIF	10	Unmodified	_VLKKIKCYIF_					0	0	0			REV__ENST00000310015.10_1_2:174774227-174774338:-|nuORF	REV__ENST00000310015.10_1_2:174774227-174774338:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.8851928710938	2	627.88577	1253.75699	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.19	1	118.11	117.61	118.61	-0.07531								0	0	0	0.45132	1	12685	12685		16.473	0	1		+		62614	24879	41629	41645	71050	71050					0.14025831529647803
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.3155212402344	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.417	1	59.417	58.917	59.917	0								0	0	0	0.45132	1	5167	5167		2.028	0	1				62615	13182	41630	41646	71051	71051					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.3162536621094	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.79	1	116.79	116.29	117.29	0								0	0	0	0.45132	1	11959	11959		0.48304	0	1				62616	13182	41630	41646	71052	71052					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.3160095214844	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.33	1	119.33	118.83	119.83	0								0	0	0	0.45132	1	12110	12110		0.48304	0	1				62617	13182	41630	41646	71053	71053					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.315673828125	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.319	1	26.365	25.865	26.865	0.045507								0	0	0	0.45132	1	1105	1105		4.3388	0	1				62618	13182	41630	41646	71054	71054					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.3157043457031	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.46	1	113.39	112.89	113.89	-0.067215								0	0	0	0.45132	1	12306	12306		0.5277	0	1				62619	13182	41630	41646	71055	71055					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.3125915527344	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.17	1	115.09	114.59	115.59	-0.072342								0	0	0	0.45132	1	12432	12432		1.8869	0.1306	1				62620	13182	41630	41646	71056	71056					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.31610107421875	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.452	1	59.485	58.985	59.985	0.032822								0	0	0	0.45132	1	5492	5492		0.5277	0	1				62621	13182	41630	41646	71057	71057					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.3158264160156	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.46	1	117.55	117.05	118.05	0.087753								0	0	0	0.45132	1	12431	12431		1.7563	0	1				62622	13182	41630	41646	71058	71058					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.3154296875	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.917	1	29.029	28.529	29.529	0.11225								0	0	0	0.45132	1	1209	1209		1.8869	0	1				62623	13182	41630	41646	71059	71059					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.31585693359375	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.16	1	118.22	117.72	118.72	0.059448								0	0	0	0.45132	1	12450	12450		1.8869	0	1				62624	13182	41630	41646	71060	71060					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.3157653808594	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.095	1	18.624	18.124	19.124	-0.47071								0	0	0	0.45132	1	472	472		7.0187	0	1				62625	13182	41630	41646	71061	71061					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.31463623046875	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.577	1	19.948	19.448	20.448	-0.6296								0	0	0	0.45132	1	670	670		2.028	0	1				62626	13182	41630	41646	71062	71062					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.31646728515625	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.06	1	113.08	112.58	113.58	0.016953								0	0	0	0.45132	1	13686	13686		1.8869	1.4039	1				62627	13182	41630	41646	71063	71063					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.3141174316406	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.62	1	115.6	115.1	116.1	-0.016441								0	0	0	0.45132	1	13903	13903		0.48304	0	1				62628	13182	41630	41646	71064	71064					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.3151550292969	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.14	1	118.04	117.54	118.54	-0.10152								0	0	0	0.45132	1	14082	14082		1.8869	0	1				62629	13182	41630	41646	71065	71065					0.3054822610067731
VLKKNSSV	8	Unmodified	_VLKKNSSV_					0	0	0			REV__ENSG00000152465|ENST00000378165|NMT2	REV__ENSG00000152465|ENST00000378165|NMT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.7709655761719	2	437.77146	873.528367	-0.042662	-1.8676E-05	-0.29867	-0.00013075	-0.34133	-0.00014942	437.77145318928746	37.97	1.6725	37.912	37.588	39.261	-0.057915					143	52	4	0	0	0	0.80308	1	2246	2246		16.473	5.6076	1	1041500	+		62630	20300	41631	41647	71066	71066					0.0865437527713766
VLKLLARG	8	Unmodified	_VLKLLARG_					0	0	0		ENST00000445792.7_1_X:305849-322301:-|nuORF	ENST00000445792.7_1_X:305849-322301:-|nuORF	ENST00000445792.7_1_X:305849-322301:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3002014160156	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.86294	1	6732	6732		8.8223	0	1	2081500			62631	11829	41632	41648	71067	71067					0.14627262273359065
VLKLRASSH	9	Unmodified	_VLKLRASSH_					0	0	0		nc|ENSG00000288520|G9CGD6-3|CNK3;nc|ENSG00000288520|G9CGD6|CNK3;nc|ENSG00000288520|G9CGD6-2|CNK3;ENSG00000153721|ENST00000607772|CNKSR3	nc|ENSG00000288520|G9CGD6-3|CNK3	nc|ENSG00000288520|G9CGD6-3|CNK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.80914306640625	2	505.808908	1009.60326	0.96123	0.0004862	-0.61337	-0.00031025	0.34786	0.00017595	505.808486899562	22.428	0.48369	21.817	21.592	22.076	-0.6107					25	10	3	0	0	0	0.35373	1	907	907		60.972	6.2073	1	239310			62632	15333	41633	41649	71068	71068					0.09884557808356931
VLKMLQAA	8	Unmodified	_VLKMLQAA_					0	0	0		ENSG00000161509|ENST00000293190|GRIN2C	ENSG00000161509|ENST00000293190|GRIN2C	ENSG00000161509|ENST00000293190|GRIN2C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.26544189453125	2	437.264956	872.515359	-2.1128	-0.00092385	3.801	0.001662	1.6882	0.00073819	437.26659968951054	24.085	1.9921	24.085	23.594	25.587	0					203	89	5	0	0	0	0.80706	1	855	855		19.36	1.995	1	1366900			62633	5636	41634	41650	71069	71069					0.07400220893384812
VLKMLVTID	9	Unmodified	_VLKMLVTID_					0	0	0			REV__ENST00000574867.5_1_17:5302907-5307466:-|nuORF	REV__ENST00000574867.5_1_17:5302907-5307466:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.313720703125	2	516.312103	1030.60965	0.96654	0.00049903	2.5474	0.0013153	3.514	0.0018143	516.3133887311924	32.644	2.0073	32.856	32.593	34.6	0.21168					79	47	2	0	0	0	0.7932	1	2355	2355		23.042	0	1	535970	+		62634	28978	41635	41651	71070	71070					0.09557314924882121
VLKPLKVIPEV	11	Unmodified	_VLKPLKVIPEV_					0	0	0		ENST00000604062.6_2_X:53123411-53128703:+|nuORF	ENST00000604062.6_2_X:53123411-53128703:+|nuORF	ENST00000604062.6_2_X:53123411-53128703:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2674560546875	3	412.275958	1233.80605	-1.8876	-0.00077822	-4.4418	-0.0018312	-6.3294	-0.0026095	412.2740654567788	47.954	1.1444	47.976	47.572	48.717	0.02227					53	33	2	0	0	0	0.1767	1	3646	3646		5.6988	0	1	190270			62635	14425	41636	41652	71071	71071					0.19849443090288332
VLKPVVELLSN	11	Unmodified	_VLKPVVELLSN_					0	0	0		nc|ENSG00000109762|Q9H3E2|SNX25;ENSG00000109762|ENST00000652585|SNX25	nc|ENSG00000109762|Q9H3E2|SNX25	nc|ENSG00000109762|Q9H3E2|SNX25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	605.8727416992188	2	605.873914	1209.73327	-1.2702	-0.00076958	-1.7859	-0.001082	-3.0561	-0.0018516	605.8726634233227	100.16	1.4911	100.34	99.884	101.38	0.17199					100	34	4	0	0	0	0.72739	1	10418	10418		27.047	1.4733	1	739750			62636	2482	41637	41653	71072	71072					0.13679689296850484
VLKQLMAA	8	Unmodified	_VLKQLMAA_					0	0	0		nc|ENSG00000153132|O14967-2|CLGN;ENSG00000153132|ENST00000325617|CLGN	nc|ENSG00000153132|O14967-2|CLGN	nc|ENSG00000153132|O14967-2|CLGN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2638244628906	2	437.264956	872.515359	-2.1366	-0.00093428	3.8525	0.0016846	1.7158	0.00075028	437.2665977971134	22.445	1.4687	22.445	22.126	23.594	0					162	69	4	0	0	0	0.81548	1	729	729		20.482	0	1	999210			62637	5215	41638	41654	71073	71073					0.07400220893396181
VLKRKLCLKH	10	Unmodified	_VLKRKLCLKH_					0	0	0			REV__ENST00000252804.8_1_2:1637315-1637576:-|nuORF	REV__ENST00000252804.8_1_2:1637315-1637576:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2671813964844	3	413.269032	1236.78527	0.21308	8.806E-05	-2.1975	-0.00090814	-1.9844	-0.00082008	413.2670936743631	41.866	2.062	41.835	40.73	42.792	-0.030991					122	53	4	0	0	0	0.86047	1	3068	3068		23.523	4.9916	1	252870	+		62638	24298	41639	41655	71074	71074					0.1763457422960073
VLKVKDKL	8	Unmodified	_VLKVKDKL_					0	0	0			REV__ENST00000502917.1_1_4:4269618-4270421:-|nuORF	REV__ENST00000502917.1_1_4:4269618-4270421:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.2554626464844	2	471.820953	941.627353	-0.60568	-0.00028577	0.42225	0.00019923	-0.18343	-8.6546E-05	471.82106972988134	30.523	0.43654	30.527	30.316	30.753	0.0037193					17	9	2	0	0	0	0.4196	1	2008	2008		45.952	8.7928	1	71898	+		62639	19932	41640	41656	71075	71075					0.15420398242031297
VLKWPRPS	8	Unmodified	_VLKWPRPS_					0	0	0		nc|ENSG00000163082|Q8IWX5-2|SGPP2;ENSG00000163082|ENST00000321276|SGPP2	nc|ENSG00000163082|Q8IWX5-2|SGPP2	nc|ENSG00000163082|Q8IWX5-2|SGPP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7961730957031	2	491.795269	981.575986	-0.62954	-0.00030961	1.7556	0.00086339	1.126	0.00055378	491.79606037186466	51.204	1.5616	51.18	50.34	51.902	-0.02343					100	43	3	0	0	0	0.85277	1	4492	4492		25.45	6.0902	1	394140			62640	5763	41641	41657	71076	71076					0.08446074267988024
VLLAAVLVGG	10	Unmodified	_VLLAAVLVGG_					0	0	0			REV__ENSG00000173621|ENST00000309602|LRFN4	REV__ENSG00000173621|ENST00000309602|LRFN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.302001953125	2	456.299853	910.585153	-1.0845	-0.00049484	2.3764	0.0010844	1.2919	0.00058952	456.3007985571921	43.194	1.64	43.158	42.714	44.354	-0.03582					100	38	4	0	0	0	0.85976	1	3370	3370		35.201	0	1	671500	+		62641	21938	41642	41658	71077	71077					0.1262842283366581
VLLAFEKDN	9	Unmodified	_VLLAFEKDN_					0	0	0			REV__ENSG00000182263|ENST00000333129|FIGN	REV__ENSG00000182263|ENST00000333129|FIGN	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8268432617188	2	524.787307	1047.56006	-0.63702	-0.0003343	-0.52301	-0.00027447	-1.16	-0.00060877	525.287065472767	99.723	0.37465	99.723	99.513	99.887	0					10	8	2	0	0	0	0.20789	1	10067	10067		42.396	0	1	37835	+		62642	22514	41643	41659	71078	71078					0.038183232404207956
VLLAKCLL	8	Unmodified	_VLLAKCLL_					0	0	0		ENSG00000116176|ENST00000234798|TPSG1	ENSG00000116176|ENST00000234798|TPSG1	ENSG00000116176|ENST00000234798|TPSG1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.7748718261719	2	436.785524	871.556496	-1.5126	-0.00066069	3.9937	0.0017444	2.481	0.0010837	436.7872529953327	90.747	0.38911	90.964	90.71	91.099	0.21736					13	9	2	0	0	0	0.4196	1	9089	9089		20.482	5.8177	1	132370			62643	2905	41644	41660	71079	71079					0.11557981932867278
VLLALDVLQAV	11	Unmodified	_VLLALDVLQAV_					0	0	0			REV__ENSG00000196284|ENST00000371459|SUPT3H	REV__ENSG00000196284|ENST00000371459|SUPT3H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	577.3682250976562	2	577.363182	1152.71181	2.1383	0.0012346	4.0903	0.0023616	6.2285	0.0035961	577.3654203694961	102.01	1.0705	102.33	101.93	103.01	0.32511					73	24	4	0	0	0	0.77061	1	12494	12494		17.468	0	1	1980600	+		62644	23110	41645	41661	71080	71080					0.141563042681355
VLLALLVELNG	11	Unmodified	_VLLALLVELNG_					0	0	0			REV__ENSG00000160796|ENST00000450053|NBEAL2	REV__ENSG00000160796|ENST00000450053|NBEAL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.366943359375	2	577.363182	1152.71181	3.0575	0.0017653	2.5466	0.0014703	5.6041	0.0032356	577.3645293846636	102.33	2.969	102.28	101.83	104.8	-0.047005					220	71	5	0	0	0	0.77421	1	11334	11334		16.717	3.2633	1	11111000	+		62645	20741	41646	41662	71081	71081					0.14156304268158237
VLLALRLRRWH	11	Unmodified	_VLLALRLRRWH_					0	0	0		nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;ENSG00000253537|ENST00000518325|PCDHGA7	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7	nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.3026123046875	3	478.305245	1431.89391	-1.7989	-0.00086042	-3.0135	-0.0014414	-4.8124	-0.0023018	478.3036786471485	67.172	1.202	67.201	66.753	67.955	0.02858					107	52	3	0	0	0	0.80593	1	6366	6366		10.104	0.45776	1	286540			62646	8861	41647	41663	71082	71082					0.1952350152425879
VLLAPTPPGKN	11	Unmodified	_VLLAPTPPGKN_					0	0	0		ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.82958984375	2	553.832049	1105.64954	-0.78391	-0.00043415	-2.87	-0.0015895	-3.6539	-0.0020237	553.8303032906427	88.667	3.0236	88.735	86.751	89.775	0.068161					207	70	4	0	0	0	0.65746	2	8988	8988;9060		37.812	0	1	1489800			62647	4538	41648	41664	71083;71084	71083					0.10094577919812764
VLLAPTPPGKN	11	Unmodified	_VLLAPTPPGKN_					0	0	0		ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.8301391601562	2	553.832049	1105.64954	-0.7821	-0.00043315	-2.4929	-0.0013807	-3.275	-0.0018138	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.60058	1	9310	9310		44.377	11.565	1	5219600			62648	4538	41648	41664	71085	71085					0.10094577919812764
VLLAPTPPGKN	11	Unmodified	_VLLAPTPPGKN_					0	0	0		ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8300170898438	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.61369	2	8991	8933;8991		42.864	10.052	1	6029400			62649	4538	41648	41664	71086;71087	71087					0.10094577919812764
VLLAPTPPGKN	11	Unmodified	_VLLAPTPPGKN_					0	0	0		ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8297729492188	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.73893	1	8991	8991		24.519	0.99649	1	5453100			62650	4538	41648	41664	71088	71088					0.10094577919812764
VLLAPTPPGKN	11	Unmodified	_VLLAPTPPGKN_					0	0	0		ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8302001953125	2	553.832049	1105.64954	0.37109	0.00020552	-3.8764	-0.0021469	-3.5053	-0.0019414	553.8297890518746	88.271	2.6717	88.72	87.145	89.817	0.44893					185	64	4	0	0	0	0.7434	1	10456	10456		23.523	0	1	1786500			62651	4538	41648	41664	71089	71089					0.10094577919812764
VLLAPTPPGKN	11	Unmodified	_VLLAPTPPGKN_					0	0	0		ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	ENSG00000142025|ENST00000269945|DMRTC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.830322265625	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.7434	1	10757	10757		23.523	1.5628	1	5911200			62652	4538	41648	41664	71090	71090					0.10094577919812764
VLLARPRRR	9	Unmodified	_VLLARPRRR_					0	0	0			REV__ENST00000284984.7_1_21:28217444-28217693:-|nuORF	REV__ENST00000284984.7_1_21:28217444-28217693:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8531494140625	2	568.877991	1135.74143	0.8696	0.0004947	-2.2778	-0.0012958	-1.4082	-0.00080112	568.8767469019464	102.15	0.35743	102.29	101.98	102.34	0.13523					12	8	2	0	0	0	0.20789	1	10744	10744		24.203	4.8428	1	295980	+		62653	24631	41649	41665	71091	71091					0.17898725847499009
VLLASTRFSL	10	Unmodified	_VLLASTRFSL_					0	0	0			REV__ENST00000480575.1_1_X:100603308-100603359:-|nuORF	REV__ENST00000480575.1_1_X:100603308-100603359:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8305053710938	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.86218	1	9138	9138		32.812	0.85756	1	6402500	+		62654	27420	41650	41666	71092	71092					0.10094577919812764
VLLAVLLWRDD	11	Unmodified	_VLLAVLLWRDD_					0	0	0			REV__nc|ENSG00000174807|Q9HCU0-2|CD248	REV__nc|ENSG00000174807|Q9HCU0-2|CD248	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.591796875	3	438.258967	1311.75507	-2.0264	-0.0008881	-0.89646	-0.00039288	-2.9229	-0.001281	438.2585447663128	30.099	0.96018	30.099	29.739	30.699	0					100	33	5	0	0	0	0.73621	1	1319	1319		25.126	0	1	863580	+		62655	22016	41651	41667	71093	71093					0.11166494045392028
VLLAWLVLRPE	11	Unmodified	_VLLAWLVLRPE_					0	0	0			REV__nc|ENSG00000112414|Q86SQ4-2|ADGRG6	REV__nc|ENSG00000112414|Q86SQ4-2|ADGRG6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.27349853515625	3	436.939458	1307.79654	-1.5892	-0.00069437	2.2779	0.00099529	0.68869	0.00030092	436.9403019819708	46.415	1.4859	46.431	45.966	47.452	0.015511					115	41	4	0	0	0	0.75779	1	3417	3417		20.315	1.3487	1	814020	+		62656	17945	41652	41668	71094	71094					0.1549567480474252
VLLCKIQN	8	Unmodified	_VLLCKIQN_					0	0	0			REV__ENSG00000180917|ENST00000434935|CMTR2	REV__ENSG00000180917|ENST00000434935|CMTR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774353027344	2	465.775688	929.536823	0.52254	0.00024339	3.4867	0.001624	4.0093	0.0018674	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.884	1	8385	8385		33.516	3.0119	1	1330400	+		62657	22426	41653	41669	71095	71095					0.06923605922099796
VLLCKVLVF	9	Unmodified	_VLLCKVLVF_					0	0	0			REV__ENST00000600330.1_1_19:50978580-50979281:-|nuORF	REV__ENST00000600330.1_1_19:50978580-50979281:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.7586059570312	2	517.327556	1032.64056	0.099735	5.1596E-05	3.1302	0.0016193	3.2299	0.0016709	517.3289139728587	30.435	0.52406	30.439	30.229	30.753	0.0037212					28	11	3	0	0	0	0.20789	1	2030	2030		19.36	0	1	243030	+		62658	29310	41654	41670	71096	71096					0.12554513029772352
VLLCLYVM	8	Carbamidomethyl (C),Oxidation (M)	_VLLC(Carbamidomethyl (C))LYVM(Oxidation (M))_	VLLC(1)LYVM	VLLCLYVM(1)	VLLC(55)LYVM	VLLCLYVM(55)	0	1	1			REV__nc|ENSG00000187912|Q6ZS10-3|CLEC17A	REV__nc|ENSG00000187912|Q6ZS10-3|CLEC17A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.808349609375	2	513.771757	1025.52896	-0.57997	-0.00029797	0.86806	0.00044598	0.28809	0.00014801	513.7722216521295	46.976	0.30595	47.447	47.344	47.65	0.4714					9	6	2	0	0	0	0.4196	1	4435	4435		54.895	20.722	1	244950	+		62659	30114	41655	41671	71097	71097	359	440			0.017217106103316837
VLLDKIYSR	9	Unmodified	_VLLDKIYSR_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.83056640625	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.7932	1	9250	9250		21.96	1.013	1	6029400			62660	8945	41656	41672	71098	71098					0.10094577919812764
VLLDLISEVPL	11	Unmodified	_VLLDLISEVPL_					0	0	0		ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	605.8719482421875	2	605.868297	1209.72204	2.969	0.0017988	3.426	0.0020757	6.3951	0.0038746	605.8701685265158	100.36	1.5776	100.31	99.825	101.4	-0.052109					123	36	5	0	0	0	0.7342	1	10854	10854		25.574	0	1	1633200			62661	999	41657	41673	71099	71099					0.12556867202715694
VLLDLLDK	8	Unmodified	_VLLDLLDK_					0	0	0			REV__nc|ENSG00000215301|O00571-2|DDX3X	REV__nc|ENSG00000215301|O00571-2|DDX3X	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.790771484375	2	464.789318	927.564084	-0.5794	-0.0002693	3.5758	0.001662	2.9964	0.0013927	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.85277	1	2165	2165		25.45	0	1	409180	+		62662	23681	41658	41674	71100	71100					0.09740412734129222
VLLDLLDK	8	Unmodified	_VLLDLLDK_					0	0	0			REV__nc|ENSG00000215301|O00571-2|DDX3X	REV__nc|ENSG00000215301|O00571-2|DDX3X	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.7920227050781	2	464.789318	927.564084	0.17035	7.9177E-05	2.8409	0.0013204	3.0113	0.0013996	464.79051158794385	34.27	1.2624	34.378	34.019	35.281	0.10829					129	53	3	0	0	0	0.86288	1	1789	1789		26.796	0	1	283920	+		62663	23681	41658	41674	71101	71101					0.09740412734129222
VLLEPYALI	9	Unmodified	_VLLEPYALI_					0	0	0		ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1;nc|ENSG00000008226|Q9Y238-2|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.8219604492188	2	515.812793	1029.61103	-0.63425	-0.00032715	-4.4018	-0.0022705	-5.036	-0.0025977	516.3136953656073	114.92	0.082588	114.92	114.88	114.96	0					5	3	2	0	0	0	0.20789	1	11834	11834		12.959	0	1	12861			62664	737	41659	41675	71102	71102					0.09741272285282321
VLLEQLMAQLK	11	Unmodified	_VLLEQLMAQLK_					0	0	0			REV__ENSG00000137877|ENST00000320955|SPTBN5	REV__ENSG00000137877|ENST00000320955|SPTBN5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4059448242188	2	643.381048	1284.74754	-1.1469	-0.00073786	-1.4583	-0.00093822	-2.6051	-0.0016761	643.3796424536232	106.58	0.39577	106.63	106.34	106.74	0.053757					12	8	2	0	0	0	0.16822	1	11319	11319		44.377	0	1	45269	+		62665	19422	41660	41676	71103	71103					0.1165601845348192
VLLEVVPDV	9	Unmodified	_VLLEVVPDV_					0	0	0		ENSG00000146205|ENST00000674324|ANO7;nc|ENSG00000146205|Q6IWH7|ANO7;nc|ENSG00000146205|Q6IWH7-3|ANO7	ENSG00000146205|ENST00000674324|ANO7	ENSG00000146205|ENST00000674324|ANO7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7957458496094	2	491.794601	981.574648	-0.71316	-0.00035073	3.1449	0.0015467	2.4318	0.0011959	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.77546	1	3616	3616		31.955	0	1	1219600			62666	4825	41661	41677	71104	71104					0.08312395388566074
VLLFPYRL	8	Unmodified	_VLLFPYRL_					0	0	0			REV__ENST00000524783.1_1_11:46568623-46568797:-|nuORF	REV__ENST00000524783.1_1_11:46568623-46568797:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.81298828125	2	510.81567	1019.61679	-0.053582	-2.7371E-05	-2.9046	-0.0014837	-2.9581	-0.0015111	510.81277149178777	80.826	1.111	81.247	80.721	81.832	0.4215					79	26	4	0	0	0	0.89457	1	9270	9270		37.028	9.1462	1	1491100	+		62667	28173	41662	41678	71105	71105					0.10776415587611154
VLLFWKTFLL	10	Unmodified	_VLLFWKTFLL_					0	0	0		nc|ENSG00000086991|Q9NPH5-9|NOX4;nc|ENSG00000086991|Q9NPH5-6|NOX4;nc|ENSG00000086991|Q9NPH5-8|NOX4;ENSG00000086991|ENST00000263317|NOX4;nc|ENSG00000086991|Q9NPH5-7|NOX4;ENST00000527626.5_1_11:89166015-89224483:-|nuORF;ENST00000525278.1_1_11:89177257-89224483:-|nuORF;nc|ENSG00000086991|Q9NPH5-5|NOX4;nc|ENSG00000086991|Q9NPH5-3|NOX4;nc|ENSG00000086991|Q9NPH5-4|NOX4	nc|ENSG00000086991|Q9NPH5-9|NOX4	nc|ENSG00000086991|Q9NPH5-9|NOX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3929443359375	2	640.394285	1278.77402	1.5016	0.00096165	-3.3621	-0.0021531	-1.8604	-0.0011914	640.3918289830424	53.64	0.76788	53.688	53.333	54.101	0.047806					54	25	3	0	0	0	0.85438	1	4391	4391		16.473	0.83134	1	144140			62668	1564	41663	41679	71106	71106					0.14578075407143842
VLLGCPVPL	9	Unmodified	_VLLGCPVPL_					0	0	0		ENSG00000171487|ENST00000390649|NLRP5	ENSG00000171487|ENST00000390649|NLRP5	ENSG00000171487|ENST00000390649|NLRP5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7611083984375	2	455.775157	909.53576	-0.59697	-0.00027209	-1.2704	-0.00057904	-1.8674	-0.00085112	455.77187735571493	34.756	0.52253	34.7	34.401	34.924	-0.056381					13	11	2	0	0	0	0.20789	1	2189	2189		14.664	0	1	16389			62669	6670	41664	41680	71107	71107					0.07737391553189354
VLLGLLVPVE	10	Unmodified	_VLLGLLVPVE_					0	0	0		ENSG00000197386|ENST00000355072|HTT;ENST00000506137.1_1_4:3117057-3123221:+|nuORF	ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.3609619140625	2	526.341718	1050.66888	-1.5922	-0.00083802	3.2441	0.0017075	1.6519	0.00086947	526.3432905357417	33.592	0.34239	33.592	33.497	33.839	0					11	8	2	0	0	0	0.37624	1	1744	1744		24.203	13.937	1	40756			62670	8159	41665	41681	71108	71108					0.1455753421071222
VLLGPARVLDW	11	Unmodified	_VLLGPARVLDW_					0	0	0		ENST00000337304.2_1_22:39916672-39916864:+|nuORF	ENST00000337304.2_1_22:39916672-39916864:+|nuORF	ENST00000337304.2_1_22:39916672-39916864:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8692016601562	2	619.866423	1237.71829	1.6172	0.0010025	2.9706	0.0018414	4.5878	0.0028438	619.8681353181336	94.01	2.3105	94.451	92.856	95.167	0.44099					111	58	2	0	0	0	0.7144	1	11145	11145		29.17	2.4771	1	1541100			62671	10188	41666	41682	71109	71109					0.10894242219501393
VLLGPINR	8	Unmodified	_VLLGPINR_					0	0	0			REV__ENSG00000151779|ENST00000281513|NBAS	REV__ENSG00000151779|ENST00000281513|NBAS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	440.7660827636719	2	441.281995	880.549437	0.19353	8.5403E-05	3.8635	0.0017049	4.057	0.0017903	441.282456421839	18.232	0.13901	17.755	17.657	17.796	-0.47694					4	2	2	0	0	0	0.4196	1	357	357		15.636	1.8609	1	6338	+		62672	20268	41667	41683	71110	71110					0.10438385376653514
VLLGPLVYTG	10	Unmodified	_VLLGPLVYTG_					0	0	0			REV__chr19:57839149-57858576|24|10.54|0.46|4.52|+|1|ZNF587B,ZNF587|1	REV__chr19:57839149-57858576|24|10.54|0.46|4.52|+|1|ZNF587B,ZNF587|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.8150634765625	2	516.310418	1030.60628	3.1012	0.0016012	3.8274	0.0019761	6.9286	0.0035773	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.86201	1	13030	13030		24.203	1.1603	1	1162600	+		62673	15725	41668	41684	71111	71111					0.09220388142512093
VLLGRLAM	8	Unmodified	_VLLGRLAM_					0	0	0			REV__ENST00000257572.5_1_12:117298148-117298622:-|nuORF	REV__ENST00000257572.5_1_12:117298148-117298622:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.7747802734375	2	436.772948	871.531344	1.4332	0.00062597	2.8008	0.0012233	4.234	0.0018493	436.7740845812963	90.925	2.5794	90.858	90.135	92.715	-0.067085					212	61	5	0	0	0	0.9159	1	9685	9685		44.531	7.5026	1	18772000	+		62674	24343	41669	41685	71112	71112					0.0904392713028983
VLLGRLAM	8	Unmodified	_VLLGRLAM_					0	0	0			REV__ENST00000257572.5_1_12:117298148-117298622:-|nuORF	REV__ENST00000257572.5_1_12:117298148-117298622:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.77490234375	2	436.772948	871.531344	2.1516	0.00093975	2.1059	0.00091981	4.2575	0.0018596	436.7737664406362	90.685	2.706	90.731	90.049	92.755	0.046448					226	64	5	0	0	0	0.89457	1	9543	9543		37.028	1.8278	1	18180000	+		62675	24343	41669	41685	71113	71113					0.0904392713028983
VLLGRLAM	8	Unmodified	_VLLGRLAM_					0	0	0			REV__ENST00000257572.5_1_12:117298148-117298622:-|nuORF	REV__ENST00000257572.5_1_12:117298148-117298622:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	436.7748107910156	2	436.772948	871.531344	0.64809	0.00028307	3.6793	0.001607	4.3274	0.0018901	436.77446931538566	90.701	2.4445	90.855	90.26	92.704	0.15388					187	58	4	0	0	0	0.88915	1	9194	9194		35.201	6.9464	1	11761000	+		62676	24343	41669	41685	71114	71114					0.0904392713028983
VLLGVVWYFRI	11	Unmodified	_VLLGVVWYFRI_					0	0	0		nc|ENSG00000168591|Q71RG4-2|TMUB2;ENSG00000168591|ENST00000538716|TMUB2;ENST00000589184.5_1_17:42266304-42268229:+|nuORF	nc|ENSG00000168591|Q71RG4-2|TMUB2	nc|ENSG00000168591|Q71RG4-2|TMUB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	455.6081237792969	3	455.607819	1363.80163	-1.1702	-0.00053316	2.391	0.0010894	1.2208	0.00055621	455.6088473881977	71.256	2.1835	71.333	70.628	72.811	0.076225					206	91	3	0	0	0	0.73621	1	6458	6458		25.126	1.7481	1	589510			62677	6415	41670	41686	71115	71115					0.13427978667345997
VLLGVVWYFRI	11	Unmodified	_VLLGVVWYFRI_					0	0	0		nc|ENSG00000168591|Q71RG4-2|TMUB2;ENSG00000168591|ENST00000538716|TMUB2;ENST00000589184.5_1_17:42266304-42268229:+|nuORF	nc|ENSG00000168591|Q71RG4-2|TMUB2	nc|ENSG00000168591|Q71RG4-2|TMUB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6086730957031	3	455.607819	1363.80163	-0.02024	-9.2214E-06	1.323	0.00060276	1.3027	0.00059354	455.608304720296	65.806	3.5163	66.359	63.877	67.393	0.5526					173	94	4	0	0	0	0.69931	1	7136	7136		31.634	1.0654	1	1863500			62678	6415	41670	41686	71116	71116					0.13427978667345997
VLLHLKNEL	9	Unmodified	_VLLHLKNEL_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16;ENST00000380443.5_1_20:2843179-2847217:+|nuORF;ENST00000380393.7_1_20:2844875-2903853:+|nuORF	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.83251953125	2	539.834591	1077.65463	-0.19544	-0.00010551	-3.7687	-0.0020345	-3.9641	-0.00214	539.832406828333	95.236	2.2447	95.304	94.755	97	0.068344					122	52	4	0	0	0	0.67345	1	9972	9972		42.396	8.2236	1	1265100			62679	8651	41671	41687	71117	71117					0.11890881782414908
VLLHLKNEL	9	Unmodified	_VLLHLKNEL_					0	0	0		nc|ENSG00000215305|Q9H269-2|VPS16;ENSG00000215305|ENST00000380445|VPS16;ENST00000380443.5_1_20:2843179-2847217:+|nuORF;ENST00000380393.7_1_20:2844875-2903853:+|nuORF	nc|ENSG00000215305|Q9H269-2|VPS16	nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	539.8322143554688	2	539.834591	1077.65463	-1.4852	-0.00080178	-2.5265	-0.0013639	-4.0117	-0.0021657	539.8330948875176	94.99	1.5819	95.192	94.693	96.275	0.20242					96	37	4	0	0	0	0.67345	1	9678	9678		42.396	12.078	1	869370			62680	8651	41671	41687	71118	71118					0.11890881782414908
VLLHLSTEITL	11	Unmodified	_VLLHLSTEITL_					0	0	0		ENST00000312990.10_1_12:58142172-58142274:-|nuORF	ENST00000312990.10_1_12:58142172-58142274:-|nuORF	ENST00000312990.10_1_12:58142172-58142274:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8699340820312	2	619.871371	1237.72819	-0.30615	-0.00018977	-2.7556	-0.0017081	-3.0618	-0.0018979	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.72918	1	10215	10215		26.693	3.1702	1	4796900			62681	9945	41672	41688	71119	71119					0.11883385434202864
VLLIGSESI	9	Unmodified	_VLLIGSESI_					0	0	0			REV__ENSG00000221996|ENST00000624801|OR52B4	REV__ENSG00000221996|ENST00000624801|OR52B4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7774658203125	2	465.778951	929.543348	-1.0371	-0.00048307	-2.0262	-0.00094374	-3.0633	-0.0014268	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.77546	1	7796	7796		31.955	0	1	1384500	+		62682	23724	41673	41689	71120	71120					0.07575822354476713
VLLIISDT	8	Unmodified	_VLLIISDT_					0	0	0		ENST00000577949.5_1_15:25213208-25213397:+|nuORF	ENST00000577949.5_1_15:25213208-25213397:+|nuORF	ENST00000577949.5_1_15:25213208-25213397:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2652893066406	2	437.268219	872.521884	-1.6274	-0.00071159	-4.1615	-0.0018197	-5.7889	-0.0025313	437.2663457196616	22.467	1.2654	22.516	22.142	23.407	0.048553					168	64	5	0	0	0	0.80706	1	703	703		19.36	0	1	1779900			62683	14074	41674	41690	71121	71121					0.08052437325750361
VLLIMIAIY	9	Unmodified	_VLLIMIAIY_					0	0	0		ENSG00000155897|ENST00000286355|ADCY8	ENSG00000155897|ENST00000286355|ADCY8	ENSG00000155897|ENST00000286355|ADCY8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	524.826171875	2	524.827389	1047.64023	1.241	0.00065132	-1.4252	-0.00074797	-0.18416	-9.6653E-05	524.8265446316465	102.17	1.0632	102.22	101.85	102.91	0.04319					53	25	3	0	0	0	0.7932	1	11124	11124		14.664	0	1	396530			62684	5349	41675	41691	71122	71122					0.11831093309911012
VLLIPRGVN	9	Unmodified	_VLLIPRGVN_					0	0	0			REV__ENST00000590414.6_1_19:38230075-38230369:-|nuORF	REV__ENST00000590414.6_1_19:38230075-38230369:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.81536865234375	2	490.816202	979.617851	-1.2705	-0.00062356	0.042852	2.1032E-05	-1.2276	-0.00060253	490.81600949101437	73.142	0.55334	73.53	73.209	73.762	0.38779					31	13	3	0	0	0	0.77546	1	8181	8181		31.955	1.4512	1	875640	+		62685	29182	41676	41692	71123	71123					0.127226299565109
VLLIPRGVN	9	Unmodified	_VLLIPRGVN_					0	0	0			REV__ENST00000590414.6_1_19:38230075-38230369:-|nuORF	REV__ENST00000590414.6_1_19:38230075-38230369:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	490.816202	979.617851	-0.10843	-5.3222E-05	-1.1394	-0.00055921	-1.2478	-0.00061244	490.8155078618727	72.986	0.65971	73.54	73.191	73.851	0.55386	0.0051123	-0.00029195	NaN	31.955	31	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	939560	+		62686	29182	41676	41692							0.127226299565109
VLLKEIHIQ	9	Unmodified	_VLLKEIHIQ_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6;ENST00000497023.1_1_2:32727936-32730277:+|nuORF	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.84033203125	2	546.842416	1091.67028	-0.49529	-0.00027085	-3.9856	-0.0021795	-4.4809	-0.0024504	546.8402497724348	101.28	3.7061	101.28	100.69	104.39	0					228	91	5	0	0	0	0.74721	2	10424	10393;10424		37.159	3.6689	1	22090000			62687	2871	41677	41693	71124;71125	71125					0.12811168299458586
VLLKEIHIQ	9	Unmodified	_VLLKEIHIQ_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6;ENST00000497023.1_1_2:32727936-32730277:+|nuORF	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.84033203125	2	546.842416	1091.67028	-1.4624	-0.00079971	-3.3804	-0.0018485	-4.8428	-0.0026482	546.8405462910221	100.83	2.7909	101	100.41	103.2	0.17193					240	68	6	0	0	0	0.76255	1	10654	10654		35.618	5.1146	1	44929000			62688	2871	41677	41693	71126	71126					0.12811168299458586
VLLKNGMV	8	Unmodified	_VLLKNGMV_					0	0	0			REV__nc|ENSG00000156931|Q8N3P4-2|VPS8	REV__nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.26556396484375	2	437.264956	872.515359	0.61137	0.00026733	1.1908	0.00052067	1.8021	0.00078801	437.26544903001695	24.059	2.1982	24.114	23.607	25.805	0.055487					136	70	4	0	0	0	0.82464	1	937	937		21.702	0	1	1313200	+		62689	20517	41678	41694	71127	71127					0.0740022089340755
VLLKTPILRT	10	Unmodified	_VLLKTPILRT_					0	0	0		ENST00000204566.6_1_15:65255658-65255769:-|nuORF	ENST00000204566.6_1_15:65255658-65255769:-|nuORF	ENST00000204566.6_1_15:65255658-65255769:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3663940429688	2	577.386991	1152.75943	-0.31974	-0.00018462	0.032889	1.8989E-05	-0.28685	-0.00016563	577.3869826702569	102.57	0.20178	102.57	102.43	102.63	0					7	4	2	0	0	0	0.37624	1	10474	10474		19.997	0	1	68940			62690	9100	41679	41695	71128	71128					0.18916003258982528
VLLLANGKGF	10	Unmodified	_VLLLANGKGF_					0	0	0			REV__chr19:1854760-1862332|15|24.93|0.01|11.88|-|0|KLF16,None|1	REV__chr19:1854760-1862332|15|24.93|0.01|11.88|-|0|KLF16,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3167724609375	2	516.316035	1030.61752	-0.2877	-0.00014854	-0.13005	-6.7148E-05	-0.41775	-0.00021569	516.3159037753348	84.02	1.328	84.185	83.926	85.255	0.1651					41	30	2	0	0	0	0.84112	1	8167	8167		37.159	2.9866	1	291560	+		62691	15690	41680	41696	71129	71129					0.10343210236646883
VLLLEKSAQHS	11	Unmodified	_VLLLEKSAQHS_					0	0	0			REV__ENST00000340622.7_1_7:149170266-149170389:-|nuORF	REV__ENST00000340622.7_1_7:149170266-149170389:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.8794555664062	2	612.85097	1223.68739	1.1704	0.00071729	-0.35516	-0.00021766	0.81527	0.00049964	612.850284207224	104.55	0.40237	104.72	104.61	105.01	0.17096					12	9	3	0	0	0	0.17062	1	11100	11100		46.457	13.644	1	225340	+		62692	25248	41681	41697	71130	71130					0.08449044114627213
VLLLIDIQ	8	Unmodified	_VLLLIDIQ_					0	0	0		nc|ENSG00000197959|Q9UQ16-2|DNM3;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000197959|Q9UQ16|DNM3;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000197959|Q9UQ16-5|DNM3;chr1:172131288-172132889|61|44.33|0.9|5.63|+|ENST00000367733|DNM3,DNM3	nc|ENSG00000197959|Q9UQ16-2|DNM3	nc|ENSG00000197959|Q9UQ16-2|DNM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8006591796875	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.83646	1	3049	3049		12.207	3.3845	1	1091400			62693	8217	41682	41698	71131	71131					0.11905003113804469
VLLLKTKIRY	10	Unmodified	_VLLLKTKIRY_					0	0	0		nc|ENSG00000284873|A8MZH6|OOSP1	nc|ENSG00000284873|A8MZH6|OOSP1	nc|ENSG00000284873|A8MZH6|OOSP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.9179077148438	2	623.915916	1245.81728	2.3391	0.0014594	-1.197	-0.0007468	1.1422	0.00071262	623.9150348689084	109.89	1.4015	109.95	109.45	110.85	0.067932					103	58	2	0	0	0	0.85251	1	13363	13363		19.997	4.355	1	709500			62694	15327	41683	41699	71132	71132					0.20420265184407072
VLLLLIIFGFV	11	Unmodified	_VLLLLIIFGFV_					0	0	0			REV__nc|ENSG00000162739|Q96DU3-3|SLAMF6	REV__nc|ENSG00000162739|Q96DU3-3|SLAMF6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	623.9193115234375	2	623.91231	1245.81007	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.49	1	110.55	110.05	111.05	0.057007								0	0	0	0.56276	1	13416	13416		17.365	5.1581	1		+		62695	20844	41684	41700	71133	71133					0.1969953258399073
VLLLLPRLECN	11	Unmodified	_VLLLLPRLECN_					0	0	0		chr2:42258677-42261121|17|37.35|0.02|11.28|+|0|TE_info:AluSp,AluSp_dup5368,Alu,SINE,donor,-,42258412,42258677|None,EML4|2;ENST00000555658.5_1_14:89730286-89817056:-|nuORF	chr2:42258677-42261121|17|37.35|0.02|11.28|+|0|TE_info:AluSp,AluSp_dup5368,Alu,SINE,donor,-,42258412,42258677|None,EML4|2	chr2:42258677-42261121|17|37.35|0.02|11.28|+|0|TE_info:AluSp,AluSp_dup5368,Alu,SINE,donor,-,42258412,42258677|None,EML4|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8821411132812	2	641.881216	1281.74788	1.9607	0.0012585	-0.033928	-2.1778E-05	1.9268	0.0012368	641.8810415769531	95.839	2.2822	95.782	94.474	96.756	-0.057526					187	53	4	0	0	0	0.63176	1	10232	10232		40.778	7.9657	1	1600600			62696	337	41685	41701	71134	71134					0.11827438173372684
VLLLLTLYC	9	Unmodified	_VLLLLTLYC_					0	0	0			REV__ENST00000558220.1_1_15:49170060-49170108:-|nuORF	REV__ENST00000558220.1_1_15:49170060-49170108:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.2415771484375	2	525.817021	1049.61949	0.1559	8.1977E-05	1.6705	0.00087836	1.8264	0.00096034	525.8182271908211	80.124	0.80188	80.651	80.359	81.161	0.52677					23	18	2	0	0	0	0.20789	1	9247	9247		25.45	0	1	128820	+		62697	28731	41686	41702	71135	71135					0.09666502930235765
VLLLPLPF	8	Unmodified	_VLLLPLPF_					0	0	0		ENSG00000243896|ENST00000641841|OR2A7;ENSG00000180658|ENST00000315453|OR2A4	ENSG00000243896|ENST00000641841|OR2A7	ENSG00000243896|ENST00000641841|OR2A7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3009948730469	2	456.301865	910.589176	-1.9367	-0.0008837	0.44582	0.00020343	-1.4908	-0.00068028	456.30190517421295	35.075	2.0362	35.075	34.654	36.69	0					139	52	4	0	0	0	0.85228	1	2013	2013		10.185	0	1	943370			62698	7339	41687	41703	71136	71136					0.1303051232737289
VLLLPLPF	8	Unmodified	_VLLLPLPF_					0	0	0		ENSG00000243896|ENST00000641841|OR2A7;ENSG00000180658|ENST00000315453|OR2A4	ENSG00000243896|ENST00000641841|OR2A7	ENSG00000243896|ENST00000641841|OR2A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30108642578125	2	456.301865	910.589176	-0.32797	-0.00014965	-1.1299	-0.00051556	-1.4578	-0.00066522	456.3011979463272	33.407	1.7069	33.406	33.012	34.719	-0.0016365					130	38	4	0	0	0	0.88393	1	1987	1987		33.493	0	1	1220600			62699	7339	41687	41703	71137	71137					0.1303051232737289
VLLLPLPF	8	Unmodified	_VLLLPLPF_					0	0	0		ENSG00000243896|ENST00000641841|OR2A7;ENSG00000180658|ENST00000315453|OR2A4	ENSG00000243896|ENST00000641841|OR2A7	ENSG00000243896|ENST00000641841|OR2A7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.793212890625	2	456.301865	910.589176	-1.2617	-0.00057572	2.736	0.0012485	1.4743	0.00067274	456.30158198664384	36.899	0.69034	36.922	36.588	37.278	0.023621					25	17	2	0	0	0	0.4196	1	2032	2032		10.185	0	1	43036			62700	7339	41687	41703	71138	71138					0.1303051232737289
VLLLPLTAV	9	Unmodified	_VLLLPLTAV_					0	0	0			REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	469.84796142578125	2	469.817879	937.621205	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.937	1	20.309	19.809	20.809	-0.62835								0	0	0	0.35004	1	717	717		14.664	0	1		+		62701	21222	41688	41704	71139	71139					0.14989880010500656
VLLLPWKKP	9	Unmodified	_VLLLPWKKP_					0	0	0		ENST00000522519.5_1_8:72875247-72964803:+|nuORF;ENST00000521467.5_1_8:72875247-72914501:+|nuORF	ENST00000522519.5_1_8:72875247-72964803:+|nuORF	ENST00000522519.5_1_8:72875247-72964803:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	547.7006225585938	2	547.360245	1092.70594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.21	1	111.2	110.7	111.7	-0.0074387								0	0	0	0.36207	1	11855	11855		8.2313	0	1				62702	13172	41689	41705	71140	71140					0.16329250547119045
VLLLSTWPRLD	11	Unmodified	_VLLLSTWPRLD_					0	0	0			REV__nc|ENSG00000204267|Q03519-2|TAP2	REV__nc|ENSG00000204267|Q03519-2|TAP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2574157714844	3	438.258967	1311.75507	0.097654	4.2798E-05	-2.9015	-0.0012716	-2.8039	-0.0012288	438.25764913166114	29.606	0.75126	29.719	29.373	30.124	0.11225					122	37	5	0	0	0	0.6593	2	1298	1263;1298		37.6	10.254	1	517110	+		62703	23475	41690	41706	71141;71142	71142					0.11166494045392028
VLLLVGLALL	10	Unmodified	_VLLLVGLALL_					0	0	0			REV__ENST00000397936.7_1_5:146614663-146614744:+|nuORF	REV__ENST00000397936.7_1_5:146614663-146614744:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.3610229492188	2	512.362453	1022.71035	-0.13841	-7.0915E-05	-2.2699	-0.001163	-2.4083	-0.0012339	512.3611813457218	74.186	1.4335	74.142	73.986	75.42	-0.043877					109	45	3	0	0	0	0.85108	1	7337	7337		19.36	0	1	293160	+		62704	26187	41691	41707	71143	71143					0.1999071497003797
VLLLVTSSP	9	Unmodified	_VLLLVTSSP_					0	0	0			REV__ENST00000286298.4_1_5:149360345-149360531:+|nuORF	REV__ENST00000286298.4_1_5:149360345-149360531:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.7905578613281	2	464.789318	927.564084	-0.072724	-3.3801E-05	3.0915	0.0014369	3.0188	0.0014031	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.78058	1	2115	2115		30.504	5.0535	1	297050	+		62705	24637	41692	41708	71144	71144					0.09740412734140591
VLLMQLPRLL	10	Unmodified	_VLLMQLPRLL_					0	0	0			REV__nc|ENSG00000173193|Q460N5-5|PARP14	REV__nc|ENSG00000173193|Q460N5-5|PARP14	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.3819580078125	2	598.383394	1194.75224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.325	1	42.287	41.787	42.787	-0.038223								0	0	0	0.45132	1	3245	3245		24.203	3.2558	1		+		62706	30035	41693	41709	71145	71145					0.16264947386912354
VLLNASYRSI	10	Unmodified	_VLLNASYRSI_					0	0	0		ENSG00000104783|ENST00000648319|KCNN4	ENSG00000104783|ENST00000648319|KCNN4	ENSG00000104783|ENST00000648319|KCNN4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8538208007812	2	568.327131	1134.63971	0.51712	0.00029389	-1.798	-0.0010219	-1.2809	-0.00072796	568.8269473803197	102.7	0.25046	102.9	102.73	102.98	0.19484					10	5	3	0	0	0	0.37624	1	10824	10824		51.193	23.31	1	84572			62707	2148	41694	41710	71146	71146					0.07777389914417654
VLLNVAYFS	9	Unmodified	_VLLNVAYFS_					0	0	0		ENST00000464167.5_1_3:197676878-197677004:+|nuORF	ENST00000464167.5_1_3:197676878-197677004:+|nuORF	ENST00000464167.5_1_3:197676878-197677004:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.6173706054688	2	513.286943	1024.55933	-1.2128	-0.00062251	1.2189	0.00062567	0.0061557	3.1596E-06	513.2874694459945	64.419	0.38992	64.419	64.195	64.585	0					32	19	2	0	0	0	0.20789	1	5666	5666		37.159	3.6435	1	55370			62708	12084	41695	41711	71147	71147					0.04803528591378381
VLLNVLPQIG	10	Unmodified	_VLLNVLPQIG_					0	0	0			REV__ENSG00000169126|ENST00000305242|ODAD2	REV__ENSG00000169126|ENST00000305242|ODAD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	533.3402099609375	2	533.336967	1064.65938	3.0971	0.0016518	2.9068	0.0015503	6.0039	0.0032021	533.3384140007198	99.339	2.8367	99.285	98.69	101.53	-0.053741					182	66	5	0	0	0	0.85438	2	10829	10792;10829		29.15	1.2673	1	3163800	+		62709	21552	41696	41712	71148;71149	71149					0.1296376592517845
VLLPFLLP	8	Unmodified	_VLLPFLLP_					0	0	0		ENST00000394224.3_1_11:65407601-65408454:+|nuORF	ENST00000394224.3_1_11:65407601-65408454:+|nuORF	ENST00000394224.3_1_11:65407601-65408454:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.30120849609375	2	456.301865	910.589176	-1.9609	-0.00089476	0.42413	0.00019353	-1.5368	-0.00070123	456.3019244318546	33.431	1.5568	33.431	33.135	34.692	0					145	44	4	0	0	0	0.88393	1	1778	1778		33.493	0	1	2313000			62710	11061	41697	41713	71150	71150					0.13030512327384258
VLLPIVLV	8	Unmodified	_VLLPIVLV_					0	0	0			REV__ENSG00000186943|ENST00000335040|OR13C8	REV__ENSG00000186943|ENST00000335040|OR13C8	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	433.2557373046875	2	433.30969	864.604826	-0.16823	-7.2895E-05	-0.77566	-0.0003361	-0.94389	-0.000409	433.30983910865433	107.38	0.36208	107.34	107.21	107.57	-0.034409					16	8	3	0	0	0	0.4196	1	11691	11691		10.185	0	1	101660	+		62711	22891	41698	41714	71151	71151					0.16710798844405872
VLLPLLPVS	9	Unmodified	_VLLPLLPVS_					0	0	0			REV__ENSG00000074181|ENST00000263388|NOTCH3	REV__ENSG00000074181|ENST00000263388|NOTCH3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	475.81927490234375	2	475.817879	949.621205	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.361	1	39.308	38.808	39.808	-0.052731								0	0	0	0.31472	1	2405	2405		25.45	6.0902	1		+		62712	16686	41699	41715	71152	71152					0.1443788001051871
VLLPLPIVL	9	Unmodified	_VLLPLPIVL_					0	0	0		ENSG00000081800|ENST00000194130|SLC13A1	ENSG00000081800|ENST00000194130|SLC13A1	ENSG00000081800|ENST00000194130|SLC13A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.84234619140625	2	488.843897	975.67324	-0.085843	-4.1964E-05	-2.5869	-0.0012646	-2.6727	-0.0013066	488.8424498144115	81.401	0.64507	81.9	81.62	82.265	0.49967					34	15	3	0	0	0	0.7932	1	9410	9410		21.702	0	1	455410			62713	1469	41700	41716	71153	71153					0.18443043424269945
VLLPVSLL	8	Unmodified	_VLLPVSLL_					0	0	0			REV__ENSG00000122218|ENST00000241704|COPA	REV__ENSG00000122218|ENST00000241704|COPA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	427.3028869628906	2	427.291497	852.568441	-0.18207	-7.7796E-05	-4.4076	-0.0018833	-4.5897	-0.0019611	427.28884742353307	67.906	0.14183	67.928	67.811	67.952	0.021599					9	6	2	0	0	0	0.4196	1	6393	6393		4.6817	0	1	27263	+		62714	18485	41701	41717	71154	71154					0.13625921947721054
VLLQLELRLG	10	Unmodified	_VLLQLELRLG_					0	0	0		ENST00000590278.1_1_19:33696051-33698478:+|nuORF;ENSG00000130881|ENST00000253193|LRP3	ENST00000590278.1_1_19:33696051-33698478:+|nuORF	ENST00000590278.1_1_19:33696051-33698478:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	577.3665161132812	2	577.368798	1152.72304	-0.96039	-0.0005545	-2.9913	-0.0017271	-3.9517	-0.0022816	577.3669807075337	102.45	2.8625	102.47	102.04	104.9	0.01989					197	69	5	0	0	0	0.85934	1	10944	10944		35.618	0.46626	1	9850700			62715	3695	41702	41718	71155	71155					0.15279126362247553
VLLQLRYTG	9	Unmodified	_VLLQLRYTG_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.816650390625	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.74721	2	8218	8218;8288		37.159	1.5408	1	859730			62716	1733	41703	41719	71156;71157	71156					0.09498308748311501
VLLQLRYTG	9	Unmodified	_VLLQLRYTG_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.81689453125	2	531.818941	1061.62333	-0.7527	-0.0004003	-3.1029	-0.0016502	-3.8556	-0.0020505	531.8171953981963	88.913	5.6005	88.913	87.726	93.326	0					375	130	4	0	0	0	0.74721	4	8743	8421;8551;8683;8743		37.159	5.6293	1	2790600			62717	1733	41703	41719	71158;71159;71160;71161	71161					0.09498308748311501
VLLQLRYTG	9	Unmodified	_VLLQLRYTG_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8167724609375	2	531.818941	1061.62333	-0.033207	-1.766E-05	-3.353	-0.0017832	-3.3862	-0.0018009	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.78536	3	8746	8746;8771;8794		29.15	2.4566	1	1254600			62718	1733	41703	41719	71162;71163;71164	71162					0.09498308748311501
VLLQLRYTG	9	Unmodified	_VLLQLRYTG_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81689453125	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.69624	5	8999	8902;8999;9059;9178;9203		40.778	6.6056	1	4208000			62719	1733	41703	41719	71165;71166;71167;71168;71169	71166					0.09498308748311501
VLLQLRYTG	9	Unmodified	_VLLQLRYTG_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8164672851562	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.76255	3	8461	8461;8520;8604		35.618	3.6689	1	1422300			62720	1733	41703	41719	71170;71171;71172	71170					0.09498308748311501
VLLQLRYTG	9	Unmodified	_VLLQLRYTG_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8167724609375	2	531.818941	1061.62333	-0.04786	-2.5453E-05	-3.9998	-0.0021272	-4.0476	-0.0021526	531.8166952377205	88.355	3.6952	88.562	87.591	91.287	0.2073					358	88	5	0	0	0	0.74721	3	8686	8640;8686;8806		37.159	2.9866	1	4916300			62721	1733	41703	41719	71173;71174;71175	71174					0.09498308748311501
VLLQLRYTG	9	Unmodified	_VLLQLRYTG_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8169555664062	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.64922	4	8581	8388;8422;8543;8581		44.117	11.371	1	1159800			62722	1733	41703	41719	71176;71177;71178;71179	71179					0.09498308748311501
VLLQLRYTG	9	Unmodified	_VLLQLRYTG_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8169555664062	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.76255	2	8890	8890;8902		35.618	2.4566	1	4022300			62723	1733	41703	41719	71180;71181	71180					0.09498308748311501
VLLQLRYTG	9	Unmodified	_VLLQLRYTG_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.81689453125	2	531.818941	1061.62333	-0.69524	-0.00036974	-3.1977	-0.0017006	-3.8929	-0.0020703	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.74721	1	10286	10286		37.159	1.5408	1	1296000			62724	1733	41703	41719	71182	71182					0.09498308748311501
VLLQLRYTG	9	Unmodified	_VLLQLRYTG_					0	0	0		ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	ENSG00000095777|ENST00000642920|MYO3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8182983398438	2	531.818941	1061.62333	-1.264	-0.00067223	-2.5284	-0.0013447	-3.7925	-0.0020169	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.67345	4	10633	10500;10584;10596;10633		42.396	6.0911	1	4586300			62725	1733	41703	41719	71183;71184;71185;71186	71186					0.09498308748311501
VLLQQSNISEI	11	Unmodified	_VLLQQSNISEI_					0	0	0		ENSG00000164512|ENST00000341048|ANKRD55	ENSG00000164512|ENST00000341048|ANKRD55	ENSG00000164512|ENST00000341048|ANKRD55	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	622.3465576171875	2	622.34826	1242.68197	0.8786	0.00054679	-2.9185	-0.0018163	-2.0399	-0.0012695	622.346539275879	95.975	2.7711	96.138	95.071	97.843	0.16317					131	65	3	0	0	0	0.68532	1	9875	9875		33.922	5.8401	1	486240			62726	5971	41704	41720	71187	71187					0.07033320532150356
VLLQRLIHHL	10	Unmodified	_VLLQRLIHHL_					0	0	0			REV__ENSG00000107036|ENST00000414202|RIC1	REV__ENSG00000107036|ENST00000414202|RIC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3936767578125	2	621.395682	1240.77681	-1.2196	-0.00075786	-2.6537	-0.001649	-3.8734	-0.0024069	621.3939066015827	106.23	1.0134	106.28	106.14	107.15	0.053757					87	23	4	0	0	0	0.86201	1	11310	11310		24.203	3.2558	1	1823300	+		62727	17642	41705	41721	71188	71188					0.1660534358466066
VLLQRRKRE	9	Unmodified	_VLLQRRKRE_					0	0	0		nc|ENSG00000005483|Q8IZD2-5|KMT2E;nc|ENSG00000005483|Q8IZD2-8|KMT2E;nc|ENSG00000005483|Q8IZD2-6|KMT2E;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000005483|Q8IZD2-7|KMT2E;ENSG00000005483|ENST00000311117|KMT2E;nc|ENSG00000005483|Q8IZD2-3|KMT2E;nc|ENSG00000005483|Q8IZD2-4|KMT2E	nc|ENSG00000005483|Q8IZD2-5|KMT2E	nc|ENSG00000005483|Q8IZD2-5|KMT2E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.3785400390625	2	599.380563	1196.74657	3.2712	0.0019607	-4.2058	-0.0025209	-0.93465	-0.00056021	599.3778849492661	103.51	3.7036	103.46	103.04	106.74	-0.043755					239	88	5	0	0	0	0.72402	1	11433	11433		38.806	8.4884	1	11967000			62728	14732	41706	41722	71189	71189					0.15606984919463684
VLLREAAR	8	Unmodified	_VLLREAAR_					0	0	0		nc|ENSG00000172794|Q96AX2-3|RAB37	nc|ENSG00000172794|Q96AX2-3|RAB37	nc|ENSG00000172794|Q96AX2-3|RAB37	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2893371582031	2	464.290351	926.566149	1.8464	0.00085725	-1.5871	-0.00073688	0.25925	0.00012037	464.28948357873554	94.132	2.3405	94.073	92.594	94.934	-0.059212					106	55	3	0	0	0	0.89494	1	10022	10022		37.159	0	1	300610			62729	15098	41707	41723	71190	71190					0.09992886262602951
VLLRGAMI	8	Unmodified	_VLLRGAMI_					0	0	0			REV__nc|ENSG00000184470|Q9NNW7-4|TXNRD2	REV__nc|ENSG00000184470|Q9NNW7-4|TXNRD2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7745361328125	2	436.772948	871.531344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.975	1	26.975	26.475	27.475	0								0	0	0	0.30004	1	1053	1053		21.702	0	1		+		62730	22682	41708	41724	71191	71191					0.0904392713028983
VLLRGAMI	8	Unmodified	_VLLRGAMI_					0	0	0			REV__nc|ENSG00000184470|Q9NNW7-4|TXNRD2	REV__nc|ENSG00000184470|Q9NNW7-4|TXNRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.77337646484375	2	436.772948	871.531344	0.39754	0.00017364	0.64314	0.00028091	1.0407	0.00045454	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.86791	1	1212	1212		28.254	0	1	81327	+		62731	22682	41708	41724	71192	71192					0.0904392713028983
VLLRGAMI	8	Unmodified	_VLLRGAMI_					0	0	0			REV__nc|ENSG00000184470|Q9NNW7-4|TXNRD2	REV__nc|ENSG00000184470|Q9NNW7-4|TXNRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.7746887207031	2	436.772948	871.531344	1.76	0.0007687	-0.85544	-0.00037363	0.90452	0.00039507	436.7727883819092	27.072	0.66235	27.045	26.605	27.267	-0.027706					26	16	2	0	0	0	0.83466	1	1221	1221		23.037	0	1	43317	+		62732	22682	41708	41724	71193	71193					0.0904392713028983
VLLRHQTK	8	Unmodified	_VLLRHQTK_					0	0	0			REV__nc|ENSG00000206203|Q96PF2|TSSK2	REV__nc|ENSG00000206203|Q96PF2|TSSK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.7872009277344	2	497.811451	993.608348	-0.77966	-0.00038813	3.1302	0.0015583	2.3506	0.0011701	497.81384616083415	26.978	0.22253	26.803	26.703	26.926	-0.17559					6	4	2	0	0	0	0.4196	1	1510	1510		68.485	20.569	1	40333	+		62733	30175	41709	41725	71194	71194					0.11128861670988499
VLLRKAENLAL	11	Unmodified	_VLLRKAENLAL_					0	0	0			REV__ENSG00000160994|ENST00000292574|CCDC105	REV__ENSG00000160994|ENST00000292574|CCDC105	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9327087402344	3	413.930962	1238.77106	0.21387	8.8526E-05	4.0224	0.001665	4.2363	0.0017535	413.93255960283653	42.979	1.989	43.044	42.116	44.105	0.065033					113	52	3	0	0	0	0.76251	1	2917	2917		19.263	0.73163	1	432840	+		62734	20755	41710	41726	71195	71195					0.1612220028232514
VLLRLGKRLL	10	Unmodified	_VLLRLGKRLL_					0	0	0		ENST00000429770.5_2_3:50402382-50403264:-|nuORF;ENST00000483620.1_1_3:50402099-50403170:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	590.8666381835938	2	590.91625	1179.81795	-1.3191	-0.00077946	-3.3767	-0.0019954	-4.6958	-0.0027748	590.9136221946663	103.25	0.15367	103.37	103.27	103.42	0.11494					5	3	2	0	0	0	0.37624	1	10848	10848		16.473	4.2663	1	121950			62735	11615	41711	41727	71196	71196					0.2352310462413243
VLLRLTAVIAE	11	Unmodified	_VLLRLTAVIAE_					0	0	0			REV__ENST00000403550.5_1_11:62473477-62473699:-|nuORF	REV__ENST00000403550.5_1_11:62473477-62473699:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.3793334960938	2	599.381906	1196.74926	0.97491	0.00058434	-4.0729	-0.0024412	-3.098	-0.0018569	599.3792959797308	103.23	2.9032	103.41	102.97	105.87	0.18297					219	73	5	0	0	0	0.7144	1	11032	11032		29.17	1.2878	1	22539000	+		62736	26276	41712	41728	71197	71197					0.15875395533771552
VLLRLTAVIAE	11	Unmodified	_VLLRLTAVIAE_					0	0	0			REV__ENST00000403550.5_1_11:62473477-62473699:-|nuORF	REV__ENST00000403550.5_1_11:62473477-62473699:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.3795776367188	2	599.381906	1196.74926	0.89992	0.0005394	-3.8863	-0.0023293	-2.9863	-0.00179	599.379410135585	103.38	3.1227	103.51	103.01	106.14	0.12621					246	78	5	0	0	0	0.65746	1	10908	10908		37.812	0.65241	1	20012000	+		62737	26276	41712	41728	71198	71198					0.15875395533771552
VLLRPTIKR	9	Unmodified	_VLLRPTIKR_					0	0	0			REV__nc|ENSG00000073803|O43283-5|MAP3K13	REV__nc|ENSG00000073803|O43283-5|MAP3K13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.372802734375	2	548.371675	1094.7288	1.0714	0.00058752	2.9821	0.0016353	4.0535	0.0022228	548.3731723776325	34.329	0.84913	34.634	34.324	35.173	0.30494					51	20	3	0	0	0	0.7932	1	2542	2542		17.365	0	1	548470	+		62738	16682	41713	41729	71199	71199					0.18522269664595115
VLLRPYRVSR	10	Unmodified	_VLLRPYRVSR_					0	0	0		ENST00000493254.1_1_X:77582824-77583046:-|nuORF	ENST00000493254.1_1_X:77582824-77583046:-|nuORF	ENST00000493254.1_1_X:77582824-77583046:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.7750244140625	3	420.262935	1257.76697	-1.5317	-0.00064371	1.409	0.00059213	-0.12271	-5.1572E-05	420.26349489916976	41.559	0.47495	42.193	41.917	42.392	0.6339					26	12	4	0	0	0	0.37624	1	3655	3655		14.694	5.0475	1	918440			62739	12722	41714	41730	71200	71200					0.14840155579258862
VLLRRVTRNL	10	Unmodified	_VLLRRVTRNL_					0	0	0		ENSG00000138075|ENST00000405322|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2739562988281	3	413.938451	1238.79352	-1.7336	-0.0007176	-2.8768	-0.0011908	-4.6104	-0.0019084	414.27044190078135	50.399	2.2578	50.399	48.66	50.918	0					47	34	2	0	0	0	0.37624	1	3853	3853		11.097	0	1	147900			62740	4264	41715	41731	71201	71201					0.18367844470594719
VLLRVVSPLTT	11	Unmodified	_VLLRVVSPLTT_					0	0	0			REV__ENST00000403534.7_1_19:45250964-45261799:+|nuORF	REV__ENST00000403534.7_1_19:45250964-45261799:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	599.3798828125	2	599.381906	1196.74926	-0.35766	-0.00021438	-2.6712	-0.0016011	-3.0289	-0.0018155	599.3801693786043	103.37	3.7428	103.41	103.03	106.77	0.041481					250	89	5	0	0	0	0.70737	1	11185	11185		30.318	1.1682	1	13277000	+		62741	16581	41716	41732	71202	71202					0.15875395533748815
VLLSASKIL	9	Unmodified	_VLLSASKIL_					0	0	0		nc|ENSG00000168491|Q8TBZ0-2|CCDC110;ENSG00000168491|ENST00000307588|CCDC110	nc|ENSG00000168491|Q8TBZ0-2|CCDC110	nc|ENSG00000168491|Q8TBZ0-2|CCDC110	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.27545166015625	2	472.312961	942.611368	-1.1485	-0.00054247	1.2255	0.00057882	0.076954	3.6346E-05	472.31333681110004	54.179	0.62654	54.763	54.501	55.127	0.58474					25	14	3	0	0	0	0.20789	1	5526	5526		56.721	1.8265	1	238600			62742	6406	41717	41733	71203	71203					0.13776692005137647
VLLSASKIL	9	Unmodified	_VLLSASKIL_					0	0	0		nc|ENSG00000168491|Q8TBZ0-2|CCDC110;ENSG00000168491|ENST00000307588|CCDC110	nc|ENSG00000168491|Q8TBZ0-2|CCDC110	nc|ENSG00000168491|Q8TBZ0-2|CCDC110	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	472.312961	942.611368	0.54325	0.00025659	-0.72468	-0.00034227	-0.18142	-8.5688E-05	472.3126037017259	54.485	0.67221	54.892	54.53	55.202	0.40663	0.064359	-0.0006261	NaN	56.721	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172090			62743	6406	41717	41733							0.13776692005137647
VLLSHDPQL	9	Unmodified	_VLLSHDPQL_					0	0	0			REV__ENST00000590278.1_1_19:33695337-33695988:+|nuORF	REV__ENST00000590278.1_1_19:33695337-33695988:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	511.2865295410156	2	511.287474	1020.5604	-1.5518	-0.0007934	0.65042	0.00033255	-0.90135	-0.00046085	511.28763661664226	41.815	1.2851	41.815	41.359	42.644	0					75	31	4	0	0	0	0.28163	1	2856	2856		66.429	5.4573	1	1825200	+		62744	29178	41718	41734	71204	71204					0.05093742960275449
VLLSHLCL	8	Unmodified	_VLLSHLCL_					0	0	0		ENST00000540920.1_1_12:129500259-129500529:+|nuORF	ENST00000540920.1_1_12:129500259-129500529:+|nuORF	ENST00000540920.1_1_12:129500259-129500529:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2639465332031	2	449.264956	896.515359	0.42959	0.000193	-3.8151	-0.001714	-3.3855	-0.001521	449.2632324319711	65.003	0.58553	65.129	64.767	65.353	0.12532					39	23	2	0	0	0	0.92973	1	5777	5777		50.025	5.4935	1	150480			62745	13512	41719	41735	71205	71205					0.06296220893375448
VLLSRIIMKEK	11	Unmodified	_VLLSRIIMKEK_					0	0	0		ENST00000488894.1_1_19:16677303-16683001:-|nuORF;ENSG00000127526|ENST00000595753|SLC35E1	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	443.94842529296875	3	443.947736	1328.82138	-1.3526	-0.00060047	3.1563	0.0014012	1.8037	0.00080075	443.9490323014212	105.98	0.77002	106.13	105.83	106.6	0.14843					63	18	4	0	0	0	0.69071	1	11338	11338		33.039	8.8076	1	2960400			62746	3503	41720	41736	71206	71206					0.1701198661583021
VLLSRIIMKEK	11	Unmodified	_VLLSRIIMKEK_					0	0	0		ENST00000488894.1_1_19:16677303-16683001:-|nuORF;ENSG00000127526|ENST00000595753|SLC35E1	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	443.947736	1328.82138	-0.96183	-0.000427	2.9318	0.0013016	1.97	0.00087456	443.94899703424926	106.67	0.57847	106.67	106.26	106.84	0	0.28904	0.0015924	NaN	33.039	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146760			62747	3503	41720	41736							0.1701198661583021
VLLSRIIMKEK	11	Unmodified	_VLLSRIIMKEK_					0	0	0		ENST00000488894.1_1_19:16677303-16683001:-|nuORF;ENSG00000127526|ENST00000595753|SLC35E1	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	443.947736	1328.82138	-0.15007	-6.6621E-05	2.0692	0.00091864	1.9192	0.00085201	443.94852162076944	106.55	0.73203	106.52	106.14	106.87	-0.025146	0.1381	0.00044362	NaN	33.039	50	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	535890			62748	3503	41720	41736							0.1701198661583021
VLLSRIIMKEK	11	Unmodified	_VLLSRIIMKEK_					0	0	0		ENST00000488894.1_1_19:16677303-16683001:-|nuORF;ENSG00000127526|ENST00000595753|SLC35E1	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	443.947736	1328.82138	2.7406	0.0012167	-0.89139	-0.00039573	1.8492	0.00082097	443.9472482083288	106.48	0.73513	106.44	106.06	106.79	-0.034134	0.059847	-0.0034995	NaN	33.039	50	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	515350			62749	3503	41720	41736							0.1701198661583021
VLLSRIIMKEK	11	Unmodified	_VLLSRIIMKEK_					0	0	0		ENST00000488894.1_1_19:16677303-16683001:-|nuORF;ENSG00000127526|ENST00000595753|SLC35E1	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	443.947736	1328.82138	1.7101	0.00075919	0.24573	0.00010909	1.9558	0.00086828	443.9476934805226	106.31	0.77601	106.34	105.94	106.72	0.03688	-0.037315	-0.001985	NaN	33.039	52	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	669280			62750	3503	41720	41736							0.1701198661583021
VLLSRIIMKEK	11	Unmodified	_VLLSRIIMKEK_					0	0	0		ENST00000488894.1_1_19:16677303-16683001:-|nuORF;ENSG00000127526|ENST00000595753|SLC35E1	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	443.947736	1328.82138	0.74554	0.00033098	1.0698	0.00047492	1.8153	0.0008059	443.9481159031063	106.18	0.78547	106.28	105.91	106.7	0.099007	-0.098405	-0.00088752	NaN	33.039	57	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1641200			62751	3503	41720	41736							0.1701198661583021
VLLSRIIMKEK	11	Unmodified	_VLLSRIIMKEK_					0	0	0		ENST00000488894.1_1_19:16677303-16683001:-|nuORF;ENSG00000127526|ENST00000595753|SLC35E1	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	ENST00000488894.1_1_19:16677303-16683001:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	443.947736	1328.82138	-1.7953	-0.00079703	3.6998	0.0016425	1.9045	0.00084549	443.94927744789885	106.23	0.87653	106.28	105.86	106.74	0.053757	-0.1012	0.0026153	NaN	33.039	66	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1281600			62752	3503	41720	41736							0.1701198661583021
VLLSRRGSS	9	Unmodified	_VLLSRRGSS_					0	0	0		chr9:101609737-101613376|23|13.91|0.06|7.86|-|1|None,GRIN3A|1	chr9:101609737-101613376|23|13.91|0.06|7.86|-|1|None,GRIN3A|1	chr9:101609737-101613376|23|13.91|0.06|7.86|-|1|None,GRIN3A|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906188964844	2	487.790715	973.566878	-0.085473	-4.1693E-05	-0.089202	-4.3512E-05	-0.17467	-8.5205E-05	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.7932	1	8398	8398		25.574	2.5316	1	1889700			62753	523	41721	41737	71207	71207					0.07903680911670108
VLLSVAMF	8	Unmodified	_VLLSVAMF_					0	0	0		ENSG00000110375|ENST00000264031|UPK2	ENSG00000110375|ENST00000264031|UPK2	ENSG00000110375|ENST00000264031|UPK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2552185058594	2	440.254057	878.493561	0.21701	9.5541E-05	2.7574	0.0012139	2.9744	0.0013095	440.25507534354267	73.683	0.57788	74.242	73.965	74.543	0.55891					35	15	3	0	0	0	0.87276	1	8339	8339		29.842	0	1	792040			62754	2525	41722	41738	71208	71208					0.04945416144835235
VLLTKLRRLL	10	Unmodified	_VLLTKLRRLL_					0	0	0			REV__ENST00000395613.2_1_22:51193627-51193861:-|nuORF	REV__ENST00000395613.2_1_22:51193627-51193861:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	612.8796997070312	2	612.929357	1223.84416	-0.12376	-7.5858E-05	0.022689	1.3907E-05	-0.10107	-6.1951E-05	612.9288451081583	104.89	0.36917	104.89	104.66	105.03	0					10	8	2	0	0	0	0.37624	1	10832	10832		27.882	0	1	73537	+		62755	18976	41723	41739	71209	71209					0.24119373795610954
VLLTLPLAIV	10	Unmodified	_VLLTLPLAIV_					0	0	0			REV__ENSG00000148602|ENST00000372105|LRIT1	REV__ENSG00000148602|ENST00000372105|LRIT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3607177734375	2	526.359911	1050.70527	-0.20788	-0.00010942	2.4444	0.0012866	2.2365	0.0011772	526.3610643716089	35.316	1.7885	35.26	34.768	36.557	-0.056381					147	40	5	0	0	0	0.86201	1	2326	2326		24.203	5.8783	1	2871800	+		62756	20125	41724	41740	71210	71210					0.18194411107378983
VLLTLPLAIV	10	Unmodified	_VLLTLPLAIV_					0	0	0			REV__ENSG00000148602|ENST00000372105|LRIT1	REV__ENSG00000148602|ENST00000372105|LRIT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3609008789062	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.8488	1	2086	2086		17.365	5.1581	1	5020100	+		62757	20125	41724	41740	71211	71211					0.18194411107378983
VLLTLQKP	8	Unmodified	_VLLTLQKP_					0	0	0		nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.30096435546875	2	456.299853	910.585153	0.11809	5.3885E-05	2.2455	0.0010246	2.3636	0.0010785	456.3007564830729	46.759	1.8735	46.745	45.791	47.665	-0.013821					101	50	3	0	0	0	0.884	1	3744	3744		33.516	3.0119	1	299420			62758	4170	41725	41741	71212	71212					0.1262842283365444
VLLTLQKP	8	Unmodified	_VLLTLQKP_					0	0	0		nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.78564453125	2	456.299853	910.585153	-0.89508	-0.00040842	2.0642	0.00094188	1.1691	0.00053346	456.3006095268826	41.695	2.3347	41.699	40.562	42.897	0.0034142					109	59	2	0	0	0	0.4196	1	2937	2937		45.952	35.687	1	272790			62759	4170	41725	41741	71213	71213					0.1262842283365444
VLLTLQKP	8	Unmodified	_VLLTLQKP_					0	0	0		nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3011779785156	2	456.299853	910.585153	0.25824	0.00011784	2.0816	0.00094982	2.3398	0.0010677	456.3006554004226	45.028	1.9814	45.077	44.089	46.07	0.048996					97	49	3	0	0	0	0.86677	1	3209	3209		27.882	1.0861	1	456360			62760	4170	41725	41741	71214	71214					0.1262842283365444
VLLTLQKP	8	Unmodified	_VLLTLQKP_					0	0	0		nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	nc|ENSG00000137076|Q9Y490-2|TLN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3006591796875	2	456.299853	910.585153	-0.39388	-0.00017973	3.0173	0.0013768	2.6234	0.001197	456.3011476839791	49.644	1.4417	49.55	48.811	50.252	-0.093182					60	34	2	0	0	0	0.79929	1	3801	3801		18.324	0	1	144660			62761	4170	41725	41741	71215	71215					0.1262842283365444
VLLTRRARTLS	11	Unmodified	_VLLTRRARTLS_					0	0	0		ENST00000498192.5_1_1:145588480-145589073:-|nuORF;ENST00000477878.5_1_1:145588480-145589427:-|nuORF;ENSG00000186364|ENST00000334513|NUDT17	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4057006835938	2	643.406778	1284.799	0.024155	1.5542E-05	-1.2013	-0.00077294	-1.1772	-0.0007574	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.61369	1	10946	10946		42.864	5.0528	1	11188000			62762	7793	41726	41742	71216	71216					0.16799523262420735
VLLTRRARTLS	11	Unmodified	_VLLTRRARTLS_					0	0	0		ENST00000498192.5_1_1:145588480-145589073:-|nuORF;ENST00000477878.5_1_1:145588480-145589427:-|nuORF;ENSG00000186364|ENST00000334513|NUDT17	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.40576171875	2	643.406778	1284.799	2.6785	0.0017233	-4.0081	-0.0025788	-1.3296	-0.00085549	643.4040497485995	105.9	1.7313	105.86	105.1	106.83	-0.03714					166	40	5	0	0	0	0.638	1	11678	11678		40.058	2.2467	1	14704000			62763	7793	41726	41742	71217	71217					0.16799523262420735
VLLTRRARTLS	11	Unmodified	_VLLTRRARTLS_					0	0	0		ENST00000498192.5_1_1:145588480-145589073:-|nuORF;ENST00000477878.5_1_1:145588480-145589427:-|nuORF;ENSG00000186364|ENST00000334513|NUDT17	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	643.4059448242188	2	643.406778	1284.799	2.6791	0.0017238	-2.3143	-0.001489	0.36483	0.00023474	643.4052640495355	107.03	1.0145	106.99	106.79	107.81	-0.034134					59	23	3	0	0	0	0.7434	1	11846	11846		23.523	2.5758	1	2103900			62764	7793	41726	41742	71218	71218					0.16799523262420735
VLLTRRARTLS	11	Unmodified	_VLLTRRARTLS_					0	0	0		ENST00000498192.5_1_1:145588480-145589073:-|nuORF;ENST00000477878.5_1_1:145588480-145589427:-|nuORF;ENSG00000186364|ENST00000334513|NUDT17	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4061889648438	2	643.406778	1284.799	1.6039	0.001032	-2.7438	-0.0017654	-1.1399	-0.00073343	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.67778	2	11394	11216;11394		35.152	4.8343	1	21138000			62765	7793	41726	41742	71219;71220	71220					0.16799523262420735
VLLTRRARTLS	11	Unmodified	_VLLTRRARTLS_					0	0	0		ENST00000498192.5_1_1:145588480-145589073:-|nuORF;ENST00000477878.5_1_1:145588480-145589427:-|nuORF;ENSG00000186364|ENST00000334513|NUDT17	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4055786132812	2	643.406778	1284.799	0.94326	0.0006069	-2.5215	-0.0016224	-1.5783	-0.0010155	643.4049918963857	105.64	1.1738	105.75	104.98	106.16	0.10766					144	29	6	0	0	0	0.72739	1	11250	11250		27.047	0.3544	1	23114000			62766	7793	41726	41742	71221	71221					0.16799523262420735
VLLTRRARTLS	11	Unmodified	_VLLTRRARTLS_					0	0	0		ENST00000498192.5_1_1:145588480-145589073:-|nuORF;ENST00000477878.5_1_1:145588480-145589427:-|nuORF;ENSG00000186364|ENST00000334513|NUDT17	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	ENST00000498192.5_1_1:145588480-145589073:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4059448242188	2	643.406778	1284.799	-1.1464	-0.0007376	-0.28555	-0.00018372	-1.4319	-0.00092132	643.406459620359	105.63	1.1927	105.7	104.97	106.16	0.073112					153	29	6	0	0	0	0.62614	1	11248	11248		41.427	9.8968	1	22367000			62767	7793	41726	41742	71222	71222					0.16799523262420735
VLLVKHHE	8	Unmodified	_VLLVKHHE_					0	0	0			REV__nc|ENSG00000173588|Q9Y592-2|CEP83	REV__nc|ENSG00000173588|Q9Y592-2|CEP83	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79095458984375	2	487.792727	973.5709	-1.4694	-0.00071678	-3.0475	-0.0014866	-4.5169	-0.0022033	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.86288	1	8081	8081		26.796	0	1	607090	+		62768	21934	41727	41743	71223	71223					0.08305770405377189
VLLVKPGLL	9	Unmodified	_VLLVKPGLL_					0	0	0			REV__nc|ENSG00000101307|Q5TFQ8|SIRPB1	REV__nc|ENSG00000101307|Q5TFQ8|SIRPB1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.246826171875	2	476.333696	950.652839	-0.94127	-0.00044836	-2.4237	-0.0011545	-3.365	-0.0016029	476.3326616074121	64.791	0.63253	65.344	64.939	65.571	0.55386					18	15	2	0	0	0	0.20789	1	7065	7065		35.201	0	1	89538	+		62769	29744	41728	41744	71224	71224					0.17553872764483458
VLLVLHTVWN	10	Unmodified	_VLLVLHTVWN_					0	0	0		nc|ENSG00000188672|P18577-11|RHCE;ENSG00000188672|ENST00000294413|RHCE;nc|ENSG00000188672|P18577-4|RHCE;nc|ENSG00000188672|P18577-10|RHCE;nc|ENSG00000188672|P18577-3|RHCE;ENST00000527187.5_1_1:25712128-25747316:-|nuORF;nc|ENSG00000188672|P18577-6|RHCE;nc|ENSG00000188672|P18577-5|RHCE	nc|ENSG00000188672|P18577-11|RHCE	nc|ENSG00000188672|P18577-11|RHCE	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.357177734375	2	597.355691	1192.69683	-0.84393	-0.00050413	1.3726	0.00081991	0.52864	0.00031578	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.85694	1	11064	11064		21.96	0	1	1407500			62770	7947	41729	41745	71225	71225					0.10818857190793096
VLLVPLSELKN	11	Unmodified	_VLLVPLSELKN_					0	0	0		ENST00000369005.5_2_10:123970214-123970343:+|nuORF	ENST00000369005.5_2_10:123970214-123970343:+|nuORF	ENST00000369005.5_2_10:123970214-123970343:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	612.8792114257812	2	612.881739	1223.74892	-0.12345	-7.5661E-05	-2.9588	-0.0018134	-3.0822	-0.0018891	612.8794735432923	104.89	2.8735	104.89	104.24	107.11	0					239	67	7	0	0	0	0.69071	1	10808	10808		23.523	0	1	38592000			62771	10609	41730	41746	71226	71226					0.14599975813894162
VLLVPLVI	8	Unmodified	_VLLVPLVI_					0	0	0			REV__ENSG00000136040|ENST00000258526|PLXNC1	REV__ENSG00000136040|ENST00000258526|PLXNC1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	433.2555847167969	2	433.30969	864.604826	2.3702	0.001027	-2.7461	-0.0011899	-0.37593	-0.00016289	433.3080478920657	107.23	0.31886	107.26	107.03	107.34	0.035614					12	7	2	0	0	0	0.4196	1	11747	11747		10.185	0	1	85744	+		62772	19282	41731	41747	71227	71227					0.1671079884441724
VLLVPLVI	8	Unmodified	_VLLVPLVI_					0	0	0			REV__ENSG00000136040|ENST00000258526|PLXNC1	REV__ENSG00000136040|ENST00000258526|PLXNC1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	433.30969	864.604826	2.7181	0.0011778	-6.7769	-0.0029365	-4.0588	-0.0017587	433.30812847670154	107.39	0.53648	107.36	106.97	107.51	-0.034134	0.035121	-0.00026159	NaN	10.185	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	184960	+		62773	19282	41731	41747							0.1671079884441724
VLLVPLVIL	9	Unmodified	_VLLVPLVIL_					0	0	0			REV__ENSG00000136040|ENST00000258526|PLXNC1	REV__ENSG00000136040|ENST00000258526|PLXNC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.81524658203125	2	489.851722	977.68889	-0.094596	-4.6338E-05	-2.4332	-0.0011919	-2.5278	-0.0012382	489.8502246457122	73.113	0.3196	73.667	73.397	73.716	0.55386					10	7	2	0	0	0	0.20789	1	8193	8193		4.3163	0	1	173870	+		62774	19282	41732	41748	71228	71228					0.19915329941329674
VLLVRFNTG	9	Unmodified	_VLLVRFNTG_					0	0	0			REV__nc|ENSG00000156510|Q2TB90-3|HKDC1;REV__ENSG00000159399|ENST00000290573|HK2	REV__ENSG00000159399|ENST00000290573|HK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.8049621582031	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.7932	1	8135	8135		21.96	2.5999	1	1874600	+		62775	20658;20494	41733	41749	71229	71229					0.08902039576855714
VLLVRPHLLEP	11	Unmodified	_VLLVRPHLLEP_					0	0	0			REV__ENST00000292433.3_1_19:13265195-13265537:+|nuORF	REV__ENST00000292433.3_1_19:13265195-13265537:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	643.4058837890625	2	643.403173	1284.79179	0.94326	0.0006069	4.1966	0.0027001	5.1399	0.003307	643.4057417471539	106.19	1.8486	106.29	106.11	107.96	0.099007					180	44	5	0	0	0	0.7342	1	11563	11563		25.574	0	1	16037000	+		62776	24678	41734	41750	71230	71230					0.16078790662004394
VLLVVCVW	8	Unmodified	_VLLVVCVW_					0	0	0			REV__ENSG00000237388|ENST00000446524|OR4A47	REV__ENSG00000237388|ENST00000446524|OR4A47	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77740478515625	2	465.777699	929.540846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.223	1	79.353	78.853	79.853	0.13086								0	0	0	0.29725	1	7504	7504		24.504	0	1		+		62777	23796	41735	41751	71231	71231					0.07325695415818245
VLLVVIYK	8	Unmodified	_VLLVVIYK_					0	0	0		ENSG00000189108|ENST00000372582|IL1RAPL2	ENSG00000189108|ENST00000372582|IL1RAPL2	ENSG00000189108|ENST00000372582|IL1RAPL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.8221435546875	2	473.820421	945.62629	0.060079	2.8467E-05	2.6015	0.0012327	2.6616	0.0012611	473.8215272662652	37.926	1.0316	37.901	37.348	38.38	-0.025417					40	23	2	0	0	0	0.87807	1	2542	2542		31.579	1.7373	1	79119			62778	7988	41736	41752	71232	71232					0.1513018387312286
VLLVVLLVLA	10	Unmodified	_VLLVVLLVLA_					0	0	0			REV__ENSG00000110448|ENST00000347785|CD5	REV__ENSG00000110448|ENST00000347785|CD5	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.361083984375	2	526.378103	1050.74165	-1.5928	-0.00083843	3.5715	0.0018799	1.9786	0.0010415	526.3789712217975	33.488	0.45155	33.488	33.388	33.839	0					17	11	2	0	0	0	0.37624	1	1723	1723		12.959	0	1	35858	+		62779	17817	41737	41753	71233	71233					0.21831288004136695
VLLVVLLVLA	10	Unmodified	_VLLVVLLVLA_					0	0	0			REV__ENSG00000110448|ENST00000347785|CD5	REV__ENSG00000110448|ENST00000347785|CD5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3610229492188	2	526.378103	1050.74165	0.086573	4.557E-05	2.4266	0.0012773	2.5132	0.0013229	526.8810316312665	33.498	0.26402	33.441	33.25	33.514	-0.056381					6	5	2	0	0	0	0.37624	1	2041	2041		12.959	5.2689	1	118720	+		62780	17817	41737	41753	71234	71234					0.21831288004136695
VLLVVPVLGRM	11	Unmodified	_VLLVVPVLGRM_					0	0	0		ENSG00000095564|ENST00000265990|BTAF1;nc|ENSG00000095564|O14981-2|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.8814697265625	2	598.383394	1194.75224	-0.74115	-0.00044349	-2.6536	-0.0015879	-3.3948	-0.0020314	598.3816706188531	40.871	1.3013	40.83	40.229	41.53	-0.04081					92	35	3	0	0	0	0.75495	1	2972	2972		20.947	3.4789	1	772980			62781	1730	41738	41754	71235	71235					0.16264947386912354
VLLWLPVLVR	10	Unmodified	_VLLWLPVLVR_					0	0	0		ENST00000367157.4_2_1:205290701-205290866:-|nuORF	ENST00000367157.4_2_1:205290701-205290866:-|nuORF	ENST00000367157.4_2_1:205290701-205290866:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3663940429688	2	604.399902	1206.78525	1.0477	0.0006332	3.3375	0.0020172	4.3851	0.0026504	604.4011457907591	104.23	0.28168	104.4	104.14	104.42	0.17096					14	6	3	0	0	0	0.37624	1	11023	11023		16.473	0	1	230630			62782	10536	41739	41755	71236	71236					0.19012897501238513
VLLYAIDHPRL	11	Unmodified	_VLLYAIDHPRL_					0	0	0			REV__nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	REV__nc|ENSG00000168619|Q9Y3Q7-2|ADAM18	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.25738525390625	3	437.259079	1308.75541	-1.0127	-0.0004428	-2.969	-0.0012982	-3.9816	-0.001741	437.25769841228777	99.435	2.9287	99.435	98.234	101.16	0					165	70	3	0	0	0	0.74405	1	10022	10022		23.378	0	1	385900	+		62783	21506	41740	41756	71237	71237					0.11337913765260055
VLLYLDTVPE	10	Unmodified	_VLLYLDTVPE_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	581.3094482421875	2	581.323722	1160.63289	0.54788	0.00031849	0.59721	0.00034717	1.1451	0.00066567	581.323882197196	63.705	0.50563	63.828	63.602	64.107	0.12252					36	20	2	0	0	0	0.85934	1	5579	5579		35.618	1.4457	1	128950			62784	8866	41741	41757	71238	71238					0.05900032243198439
VLLYSVVVVV	10	Unmodified	_VLLYSVVVVV_					0	0	0		ENSG00000119973|ENST00000239032|PRLHR	ENSG00000119973|ENST00000239032|PRLHR	ENSG00000119973|ENST00000239032|PRLHR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167724609375	2	545.349543	1088.68453	0.15128	8.2503E-05	-1.5943	-0.00086945	-1.443	-0.00078695	545.3485087526414	89.934	0.17057	90.147	90.041	90.211	0.21271					5	3	2	0	0	0	0.37624	1	8998	8998		30.504	8.5438	1	64313			62785	3106	41742	41758	71239	71239					0.14373820727746534
VLLYTSLIFLM	11	Unmodified	_VLLYTSLIFLM_					0	0	0		ENSG00000154265|ENST00000392676|ABCA5;nc|ENSG00000154265|Q8WWZ7-2|ABCA5	ENSG00000154265|ENST00000392676|ABCA5	ENSG00000154265|ENST00000392676|ABCA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.25775146484375	3	438.257687	1311.75123	-1.5943	-0.00069873	1.6249	0.00071214	0.030594	1.3408E-05	438.2583289789849	29.969	0.70984	30.036	29.73	30.44	0.066727					92	32	4	0	0	0	0.73621	1	1303	1303		25.126	2.5463	1	499410			62786	5270	41743	41759	71240	71240					0.10782688227345716
VLMASKPK	8	Unmodified	_VLMASKPK_					0	0	0		ENSG00000178966|ENST00000445877|RMI1	ENSG00000178966|ENST00000445877|RMI1	ENSG00000178966|ENST00000445877|RMI1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2655334472656	2	437.264956	872.515359	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.299	1	29.299	28.799	29.799	0								0	0	0	0.29755	1	1261	1261		24.203	0	1				62787	7236	41744	41760	71241	71241					0.07400220893396181
VLMASKPK	8	Unmodified	_VLMASKPK_					0	0	0		ENSG00000178966|ENST00000445877|RMI1	ENSG00000178966|ENST00000445877|RMI1	ENSG00000178966|ENST00000445877|RMI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2655334472656	2	437.264956	872.515359	1.7902	0.0007828	0.24809	0.00010848	2.0383	0.00089128	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.89494	1	706	706		37.159	7.3176	1	738160			62788	7236	41744	41760	71242	71242					0.07400220893396181
VLMEKGDDI	9	Unmodified	_VLMEKGDDI_					0	0	0		ENST00000423212.1_1_1:178716132-178716684:-|nuORF;nc|ENSG00000175354|P17706-3|PTPN2;nc|ENSG00000175354|P17706-2|PTPN2;nc|ENSG00000175354|P17706-4|PTPN2;ENSG00000175354|ENST00000309660|PTPN2	ENST00000423212.1_1_1:178716132-178716684:-|nuORF	ENST00000423212.1_1_1:178716132-178716684:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2774963378906	2	510.257525	1018.5005	1.0543	0.00053795	-4.3896	-0.0022398	-3.3353	-0.0017019	510.25515321666086	56.358	0.9461	56.918	56.659	57.605	0.55954					25	12	3	0	0	0	0.19479	1	5820	5820		95.815	0	1	677840			62789	7012	41745	41761	71243	71243					-0.008013157652726477
VLMEPTIVAS	10	Unmodified	_VLMEPTIVAS_					0	0	0			REV__ENSG00000170683|ENST00000642047|OR10A3	REV__ENSG00000170683|ENST00000642047|OR10A3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.29345703125	2	530.291368	1058.56818	0.74167	0.0003933	3.0682	0.001627	3.8098	0.0020203	530.2929034688844	90.473	4.5125	90.627	89.442	93.954	0.15388					327	107	5	0	0	0	0.85934	1	9195	9195		35.618	1.4457	1	2081200	+		62790	21681	41746	41762	71244	71244					0.041241341655450015
VLMFLTAIILY	11	Oxidation (M)	_VLM(Oxidation (M))FLTAIILY_		VLM(1)FLTAIILY		VLM(40)FLTAIILY	0	0	1			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.25762939453125	3	438.257687	1311.75123	0.25686	0.00011257	0.038057	1.6679E-05	0.29492	0.00012925	438.25763532850164	29.855	0.59691	29.866	29.546	30.143	0.01123					91	29	5	0	0	0	0.638	1	1303	1303		40.058	15.782	1	489580	+		62791	20376	41747	41763	71245	71245		304			0.10782688227345716
VLMFLTAIILY	11	Oxidation (M)	_VLM(Oxidation (M))FLTAIILY_		VLM(1)FLTAIILY		VLM(48)FLTAIILY	0	0	1			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.25732421875	3	438.257687	1311.75123	-1.2137	-0.00053193	0.93234	0.00040861	-0.2814	-0.00012332	438.25809944136427	29.692	1.312	29.713	29.307	30.619	0.020784					97	29	5	0	0	0	0.55601	2	1978	1978;1990		47.96	16.891	1	6019900	+		62792	20376	41747	41763	71246;71247	71246		304			0.10782688227345716
VLMFLTAIILY	11	Oxidation (M)	_VLM(Oxidation (M))FLTAIILY_		VLM(1)FLTAIILY		VLM(40)FLTAIILY	0	0	1			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2572021484375	3	438.257687	1311.75123	0.55491	0.00024319	-0.91106	-0.00039928	-0.35615	-0.00015609	438.25727820640566	29.88	1.2979	29.791	29.362	30.659	-0.089544					102	29	5	0	0	0	0.638	1	1951	1951		40.058	7.3076	1	6394700	+		62793	20376	41747	41763	71248	71248		304			0.10782688227345716
VLMFLTAIILY	11	Oxidation (M)	_VLM(Oxidation (M))FLTAIILY_		VLM(1)FLTAIILY		VLM(56)FLTAIILY	0	0	1			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2578125	3	438.257687	1311.75123	0.43951	0.00019262	-0.082176	-3.6014E-05	0.35734	0.00015661	438.2574797829233	30.966	0.60711	30.97	30.71	31.317	0.0037212					28	13	3	0	0	0	0.43778	1	2073	2073		56.434	24.8	1	475170	+		62794	20376	41747	41763	71249	71249		304			0.10782688227345716
VLMFLTAIILY	11	Oxidation (M)	_VLM(Oxidation (M))FLTAIILY_					0	0	1			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	438.257687	1311.75123	0.43951	0.00019262	-0.082176	-3.6014E-05	0.35734	0.00015661	438.2574797829233	30.966	0.60711	30.97	30.71	31.317	0.0037212	-0.17495	-1.0295E-05	NaN	56.434	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	475170	+		62795	20376	41747	41763				304			0.10782688227345716
VLMLNNTSVFS	11	Oxidation (M)	_VLM(Oxidation (M))LNNTSVFS_		VLM(1)LNNTSVFS		VLM(50)LNNTSVFS	0	0	1			REV__ENSG00000176040|ENST00000452346|TMPRSS7	REV__ENSG00000176040|ENST00000452346|TMPRSS7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	620.8131713867188	2	620.815738	1239.61692	0.57939	0.0003597	2.2116	0.001373	2.791	0.0017327	620.815913925273	71.763	0.9052	72.313	71.784	72.689	0.55008					65	21	4	0	0	0	0.53361	1	8032	8032		49.536	8.7579	1	347590	+		62796	22101	41748	41764	71250	71250		332			0.006700027346369097
VLMLNNTSVFS	11	Oxidation (M)	_VLM(Oxidation (M))LNNTSVFS_					0	0	1			REV__ENSG00000176040|ENST00000452346|TMPRSS7	REV__ENSG00000176040|ENST00000452346|TMPRSS7	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	620.815738	1239.61692	0.57939	0.0003597	2.2116	0.001373	2.791	0.0017327	620.815913925273	71.763	0.9052	72.313	71.784	72.689	0.55008	-0.025114	-0.00065517	NaN	49.536	65	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	347590	+		62797	22101	41748	41764				332			0.006700027346369097
VLMQGLRG	8	Unmodified	_VLMQGLRG_					0	0	0			REV__nc|ENSG00000099998|P36269-2|GGT5	REV__nc|ENSG00000099998|P36269-2|GGT5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2657165527344	2	437.25238	872.490207	-0.36634	-0.00016018	2.4943	0.0010906	2.1279	0.00093045	437.2536701176851	24.431	0.28773	24.385	24.264	24.551	-0.04598					6	5	2	0	0	0	0.4196	1	940	940		40.573	17.53	1	13358	+		62798	17123	41749	41765	71251	71251					0.04886166090830102
VLMVSIDQLL	10	Oxidation (M)	_VLM(Oxidation (M))VSIDQLL_		VLM(1)VSIDQLL		VLM(74)VSIDQLL	0	0	1		ENST00000521323.1_1_8:79710258-79717217:-|nuORF;nc|ENSG00000104432|P13232-2|IL7;ENSG00000104432|ENST00000263851|IL7	ENST00000521323.1_1_8:79710258-79717217:-|nuORF	ENST00000521323.1_1_8:79710258-79717217:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.8234252929688	2	573.825575	1145.6366	-1.4116	-0.00081	-1.8408	-0.0010563	-3.2524	-0.0018663	573.8243554533791	48.095	0.76067	48.565	48.194	48.954	0.46941					46	18	4	0	0	0	0.28217	1	4605	4605		74.255	10.721	1	1396500			62799	2132	41750	41766	71252	71252		42			0.0696037874540707
VLNDGELQKAI	11	Unmodified	_VLNDGELQKAI_					0	0	0		nc|ENSG00000212789|Q8NFI4|ST13P5	nc|ENSG00000212789|Q8NFI4|ST13P5	nc|ENSG00000212789|Q8NFI4|ST13P5	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	600.334228515625	2	600.335153	1198.65575	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.371	1	94.569	94.069	95.069	0.19827								0	0	0	0.56276	1	9581	9581		41.427	1.3684	1				62800	15246	41751	41767	71253	71253					0.0643705136067183
VLNELIQTERV	11	Unmodified	_VLNELIQTERV_					0	0	0		nc|ENSG00000101977|P10911-6|MCF2;nc|ENSG00000101977|P10911-2|MCF2;nc|ENSG00000101977|P10911|MCF2;nc|ENSG00000101977|P10911-4|MCF2;nc|ENSG00000101977|P10911-3|MCF2;ENSG00000101977|ENST00000519895|MCF2	nc|ENSG00000101977|P10911-6|MCF2	nc|ENSG00000101977|P10911-6|MCF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.58587646484375	3	438.585632	1312.73507	-1.997	-0.00087587	2.084	0.00091402	0.086983	3.8149E-05	438.58651601334884	31.993	0.97123	31.993	31.701	32.672	0					74	39	2	0	0	0	0.73277	1	1605	1605		25.892	1.6599	1	798930			62801	1977	41752	41768	71254	71254					0.09120698314791298
VLNEPVAIEVV	11	Unmodified	_VLNEPVAIEVV_					0	0	0			REV__nc|ENSG00000139910|P51513-5|NOVA1	REV__nc|ENSG00000139910|P51513-5|NOVA1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8666381835938	2	591.342446	1180.67034	-0.23802	-0.00014075	-2.1043	-0.0012444	-2.3424	-0.0013851	591.3403838379207	103.9	0.24191	103.9	103.72	103.96	0					6	5	2	0	0	0	0.17551	1	10675	10675		45.972	6.7194	1	72722	+		62802	19580	41753	41769	71255	71255					0.0872312350879838
VLNGLVKM	8	Unmodified	_VLNGLVKM_					0	0	0			REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2651672363281	2	437.264956	872.515359	-1.6274	-0.00071159	3.2998	0.0014429	1.6724	0.00073129	437.2663457196616	22.467	1.2654	22.516	22.142	23.407	0.048553					168	64	5	0	0	0	0.81548	1	691	691		20.482	0	1	1779900	+		62803	20406	41754	41770	71256	71256					0.07400220893396181
VLNHAEGLGA	10	Unmodified	_VLNHAEGLGA_					0	0	0		ENSG00000099904|ENST00000334554|ZDHHC8;nc|ENSG00000099904|Q9ULC8-3|ZDHHC8	ENSG00000099904|ENST00000334554|ZDHHC8	ENSG00000099904|ENST00000334554|ZDHHC8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	490.7617492675781	2	490.761623	979.508694	-1.3817	-0.0006781	1.5738	0.00077234	0.19203	9.4242E-05	490.7621188566714	28.132	0.39764	28.109	27.911	28.308	-0.023556					13	8	2	0	0	0	0.8545	1	1333	1333		36.447	0.82846	1	25401			62804	1776	41755	41771	71257	71257					0.018119992663855555
VLNIHDGSIN	10	Unmodified	_VLNIHDGSIN_					0	0	0			REV__ENST00000560691.5_1_15:71192806-71200991:+|nuORF	REV__ENST00000560691.5_1_15:71192806-71200991:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.2847290039062	2	541.285463	1080.55637	0.95607	0.00051751	-1.076	-0.00058242	-0.11992	-6.4911E-05	541.2847282396424	20.535	0.58039	20.465	20.183	20.763	-0.070011					63	26	3	0	0	0	0.86471	1	534	534		30.318	4.8675	1	207610	+		62805	28766	41756	41772	71258	71258					0.019316534665676954
VLNKKDANGG	10	Unmodified	_VLNKKDANGG_					0	0	0			REV__nc|ENSG00000138119|Q9NZM1-2|MYOF	REV__nc|ENSG00000138119|Q9NZM1-2|MYOF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.27972412109375	2	508.28018	1014.54581	-0.055639	-2.828E-05	0.18106	9.2031E-05	0.12542	6.3751E-05	508.2801815907257	88.524	3.807	88.593	87.271	91.078	0.068161					291	89	4	0	0	0	0.64457	1	9150	9150		47.657	8.4045	1	1918800	+		62806	29884	41757	41773	71259	71259					0.03911670812135526
VLNKKDANGG	10	Unmodified	_VLNKKDANGG_					0	0	0			REV__nc|ENSG00000138119|Q9NZM1-2|MYOF	REV__nc|ENSG00000138119|Q9NZM1-2|MYOF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	508.279541015625	2	508.28018	1014.54581	0.70176	0.00035669	-0.59533	-0.00030259	0.10643	5.4096E-05	508.2797771334362	88.508	3.7583	88.658	87.426	91.184	0.15055					305	89	4	0	0	0	0.86348	2	8888	8864;8888		31.53	1.1477	1	1954800	+		62807	29884	41757	41773	71260;71261	71261					0.03911670812135526
VLNLDVDVPA	10	Unmodified	_VLNLDVDVPA_					0	0	0			REV__nc|ENSG00000122882|O95905-2|ECD	REV__nc|ENSG00000122882|O95905-2|ECD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	527.7926635742188	2	527.792589	1053.57063	0.18559	9.7953E-05	1.0826	0.00057141	1.2682	0.00066936	527.7929459197176	32.2	0.51251	32.211	31.979	32.492	0.010899					26	15	2	0	0	0	0.74274	1	1794	1794		42.396	5.237	1	66260	+		62808	18519	41758	41774	71262	71262					0.04598305894865007
VLNLDVDVPA	10	Unmodified	_VLNLDVDVPA_					0	0	0			REV__nc|ENSG00000122882|O95905-2|ECD	REV__nc|ENSG00000122882|O95905-2|ECD	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	527.792589	1053.57063	-1.6062	-0.00084775	2.8333	0.0014954	1.2271	0.00064763	527.7938891614153	32.125	0.41165	32.125	31.91	32.321	0	-0.11023	0.0020669	NaN	42.396	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25850	+		62809	18519	41758	41774							0.04598305894865007
VLNLDVDVPA	10	Unmodified	_VLNLDVDVPA_					0	0	0			REV__nc|ENSG00000122882|O95905-2|ECD	REV__nc|ENSG00000122882|O95905-2|ECD	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	527.792589	1053.57063	0.18559	9.7953E-05	1.0826	0.00057141	1.2682	0.00066936	527.7929459197176	32.2	0.51251	32.211	31.979	32.492	0.010899	-0.025061	0.00021894	NaN	42.396	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66260	+		62810	18519	41758	41774							0.04598305894865007
VLNLDVDVPA	10	Unmodified	_VLNLDVDVPA_					0	0	0			REV__nc|ENSG00000122882|O95905-2|ECD	REV__nc|ENSG00000122882|O95905-2|ECD	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	527.792589	1053.57063	0.28338	0.00014957	0.81666	0.00043103	1.1	0.00058059	527.7928243365736	32.274	0.49515	32.268	31.993	32.488	-0.0061455	0.032385	-6.1821E-05	NaN	42.396	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55450	+		62811	18519	41758	41774							0.04598305894865007
VLNLDVDVPA	10	Unmodified	_VLNLDVDVPA_					0	0	0			REV__nc|ENSG00000122882|O95905-2|ECD	REV__nc|ENSG00000122882|O95905-2|ECD	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	527.792589	1053.57063	-0.21233	-0.00011206	1.4714	0.00077658	1.2591	0.00066452	527.7924581040365	32.201	0.16588	32.256	32.148	32.314	0.054886	0.020145	0.00062929	NaN	42.396	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28703	+		62812	18519	41758	41774							0.04598305894865007
VLNLDVDVPA	10	Unmodified	_VLNLDVDVPA_					0	0	0			REV__nc|ENSG00000122882|O95905-2|ECD	REV__nc|ENSG00000122882|O95905-2|ECD	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	527.792589	1053.57063	0.20856	0.00011007	-0.19256	-0.00010163	0.015992	8.4405E-06	527.7929568152716	31.92	0.17255	32.031	31.899	32.071	0.11117	-0.20493	-0.0011271	NaN	42.396	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36270	+		62813	18519	41758	41774							0.04598305894865007
VLNLDVDVPA	10	Unmodified	_VLNLDVDVPA_					0	0	0			REV__nc|ENSG00000122882|O95905-2|ECD	REV__nc|ENSG00000122882|O95905-2|ECD	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	527.792589	1053.57063	0.36057	0.00019031	-0.86098	-0.00045442	-0.50041	-0.00026411	527.7916713767884	32.25	0.43036	32.376	32.16	32.59	0.12642	0.14065	-0.0018327	NaN	42.396	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95719	+		62814	18519	41758	41774							0.04598305894865007
VLNLDVDVPA	10	Unmodified	_VLNLDVDVPA_					0	0	0			REV__nc|ENSG00000122882|O95905-2|ECD	REV__nc|ENSG00000122882|O95905-2|ECD	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	527.792589	1053.57063	0.84233	0.00044458	-1.1462	-0.00060495	-0.30386	-0.00016037	527.7915328336559	32.189	0.34302	32.296	32.102	32.446	0.10707	0.060222	-0.0021338	NaN	42.396	15	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118560	+		62815	18519	41758	41774							0.04598305894865007
VLNLSKRHASL	11	Unmodified	_VLNLSKRHASL_					0	0	0			REV__ENSG00000044446|ENST00000379942|PHKA2	REV__ENSG00000044446|ENST00000379942|PHKA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.3740844726562	2	619.372404	1236.73025	0.60184	0.00037276	-0.93131	-0.00057683	-0.32947	-0.00020406	619.3721424545147	101.51	1.6945	101.55	101.22	102.91	0.044823					109	40	4	0	0	0	0.69931	1	10915	10915		31.634	2.4642	1	2715800	+		62816	16341	41759	41775	71263	71263					0.121358589627107
VLNNLKTFYP	10	Unmodified	_VLNNLKTFYP_					0	0	0		nc|ENSG00000172869|Q9Y485|DMXL1;ENSG00000172869|ENST00000539542|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.56048583984375	3	403.560646	1207.66011	2.8514	0.0011507	-4.3616	-0.0017602	-1.5102	-0.00060945	403.5587881215693	22.775	1.0826	22.725	22.354	23.437	-0.050077					94	41	3	0	0	0	0.66675	1	735	735		46.457	8.9486	1	140620			62817	6802	41760	41776	71264	71264					0.06458560574219518
VLNPPRFP	8	Unmodified	_VLNPPRFP_					0	0	0			REV__ENST00000563686.5_1_18:52942938-53070719:-|nuORF	REV__ENST00000563686.5_1_18:52942938-53070719:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.26934814453125	2	470.27417	938.533787	-1.3301	-0.00062551	-2.93	-0.0013779	-4.2601	-0.0020034	470.27272461569635	91.968	1.6857	92.431	92.02	93.705	0.46249					82	39	3	0	0	0	0.88915	1	10967	10967		35.201	1.2791	1	881790	+		62818	28824	41761	41777	71265	71265					0.06206098859604481
VLNQLFAQL	9	Unmodified	_VLNQLFAQL_					0	0	0			REV__nc|ENSG00000104497|P57768-2|SNX16	REV__nc|ENSG00000104497|P57768-2|SNX16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.303466796875	2	523.305667	1044.59678	-0.79828	-0.00041774	-3.1608	-0.0016541	-3.9591	-0.0020718	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.76255	1	8502	8502		35.618	2.8059	1	9288900	+		62819	17460	41762	41778	71266	71266					0.0762661985700106
VLNQLFAQL	9	Unmodified	_VLNQLFAQL_					0	0	0			REV__nc|ENSG00000104497|P57768-2|SNX16	REV__nc|ENSG00000104497|P57768-2|SNX16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3034057617188	2	523.305667	1044.59678	-0.178	-9.3149E-05	-4.0857	-0.0021381	-4.2637	-0.0022312	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.76255	1	8549	8549		35.618	6.4687	1	4158500	+		62820	17460	41762	41778	71267	71267					0.0762661985700106
VLNRDQRLAW	10	Unmodified	_VLNRDQRLAW_					0	0	0		nc|ENSG00000183569|Q9H4I8-3|SERHL2;nc|ENSG00000183569|Q9H4I8-2|SERHL2;ENST00000534080.5_1_22:42950026-42967210:+|nuORF;ENSG00000183569|ENST00000327678|SERHL2	nc|ENSG00000183569|Q9H4I8-3|SERHL2	nc|ENSG00000183569|Q9H4I8-3|SERHL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2380676269531	3	424.238678	1269.6942	0.90096	0.00038222	-1.4377	-0.00060992	-0.53672	-0.0002277	424.23789327912226	18.833	0.43093	18.356	18.171	18.602	-0.47694					25	9	4	0	0	0	0.85834	1	444	444		22.58	0.018069	1	137000			62821	7540	41763	41779	71268	71268					0.07014401785841073
VLNSGWKLYR	10	Unmodified	_VLNSGWKLYR_					0	0	0		ENSG00000186230|ENST00000334181|ZNF749	ENSG00000186230|ENST00000334181|ZNF749	ENSG00000186230|ENST00000334181|ZNF749	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3473510742188	2	618.348397	1234.68224	-0.1645	-0.00010172	-3.7425	-0.0023141	-3.907	-0.0024159	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.8608	1	10016	10016		34.173	1.3601	1	511870			62822	7786	41764	41780	71269	71269					0.07428785042634445
VLNVHGRRVT	10	Unmodified	_VLNVHGRRVT_					0	0	0		ENST00000268616.8_1_16:87441547-87441679:-|nuORF	ENST00000268616.8_1_16:87441547-87441679:-|nuORF	ENST00000268616.8_1_16:87441547-87441679:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.842529296875	2	575.843813	1149.67307	0.91732	0.00052823	-2.5477	-0.0014671	-1.6304	-0.00093886	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.86471	1	9762	9762		30.318	1.1477	1	5468500			62823	9540	41765	41781	71270	71270					0.10422436476960684
VLNVHGRRVT	10	Unmodified	_VLNVHGRRVT_					0	0	0		ENST00000268616.8_1_16:87441547-87441679:-|nuORF	ENST00000268616.8_1_16:87441547-87441679:-|nuORF	ENST00000268616.8_1_16:87441547-87441679:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8436279296875	2	575.843813	1149.67307	0.78302	0.0004509	-2.2721	-0.0013084	-1.4891	-0.0008575	575.8423757005949	90.383	2.7025	90.537	88.725	91.427	0.15388					214	64	4	0	0	0	0.86047	1	8939	8939		23.523	1.5628	1	2399100			62824	9540	41765	41781	71271	71271					0.10422436476960684
VLNVRGEH	8	Unmodified	_VLNVRGEH_					0	0	0			REV__nc|ENSG00000236438|C9JC47|FAM157A	REV__nc|ENSG00000236438|C9JC47|FAM157A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	462.2542419433594	2	462.256508	922.498464	-0.32553	-0.00015048	-1.7223	-0.00079615	-2.0478	-0.00094663	462.25543964025144	50.961	0.96496	50.969	50.757	51.722	0.0077438					46	28	2	0	0	0	0.91005	1	4381	4381		42.474	3.6683	1	164860	+		62825	30226	41766	41782	71272	71272					0.03411436331805362
VLPAFPPK	8	Unmodified	_VLPAFPPK_					0	0	0		ENST00000489402.1_1_2:27593562-27595723:+|nuORF;nc|ENSG00000115234|Q15036-2|SNX17;ENSG00000115234|ENST00000233575|SNX17	ENST00000489402.1_1_2:27593562-27595723:+|nuORF	ENST00000489402.1_1_2:27593562-27595723:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7797546386719	2	434.768189	867.521825	1.3744	0.00059755	1.9263	0.00083748	3.3007	0.001435	434.7685224629794	46.827	0.1653	46.823	46.723	46.888	-0.0041618					5	3	2	0	0	0	0.4196	1	3814	3814		8.2313	0	1	17980			62826	2823	41767	41783	71273	71273					0.08276482116423267
VLPAKFLFSL	10	Unmodified	_VLPAKFLFSL_					0	0	0			REV__ENST00000582287.6_1_19:18545725-18546537:-|nuORF	REV__ENST00000582287.6_1_19:18545725-18546537:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.329345703125	2	567.84971	1133.68487	-1.1907	-0.00067614	-2.2936	-0.0013024	-3.4843	-0.0019786	567.8488223807728	93.161	0.40388	93.231	93.136	93.54	0.06987					13	9	2	0	0	0	0.37624	1	9669	9669		25.574	9.1009	1	39836	+		62827	29059	41768	41784	71274	71274					0.12337240447595832
VLPARSIQP	9	Unmodified	_VLPARSIQP_					0	0	0		ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENSG00000141452|ENST00000269221|RMC1	ENST00000589215.5_1_18:21087981-21111645:+|nuORF	ENST00000589215.5_1_18:21087981-21111645:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.278076171875	2	490.798009	979.581465	0.45454	0.00022309	3.0771	0.0015103	3.5317	0.0017333	490.7992433340884	51.542	0.41674	52.21	51.937	52.354	0.66729					16	9	2	0	0	0	0.20789	1	5140	5140		24.203	0	1	193810			62828	4503	41769	41785	71275	71275					0.09085753059810031
VLPCPALVPVR	11	Unmodified	_VLPCPALVPVR_					0	0	0		ENST00000498392.1_1_3:49069896-49070196:-|nuORF	ENST00000498392.1_1_3:49069896-49070196:-|nuORF	ENST00000498392.1_1_3:49069896-49070196:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.356201171875	2	582.352094	1162.68964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.72	1	116.7	116.2	117.2	-0.02433								0	0	0	0.56276	1	12930	12930		19.997	0	1				62829	12825	41770	41786	71276	71276					0.1147980131870554
VLPEKRSLKLL	11	Unmodified	_VLPEKRSLKLL_					0	0	0		ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENSG00000141452|ENST00000269221|RMC1	ENST00000589215.5_1_18:21087981-21111645:+|nuORF	ENST00000589215.5_1_18:21087981-21111645:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.3927612304688	2	648.424105	1294.83366	0.94467	0.00061254	-3.6222	-0.0023487	-2.6776	-0.0017362	648.4211802607363	107.32	0.65608	107.41	107.23	107.88	0.091263					31	15	3	0	0	0	0.17275	1	11536	11536		33.922	16.557	1	146800			62830	4503	41771	41787	71277	71277					0.1980334635049985
VLPFPIGPR	9	Unmodified	_VLPFPIGPR_					0	0	0		ENST00000393992.5_2_16:67260649-67260712:-|nuORF	ENST00000393992.5_2_16:67260649-67260712:-|nuORF	ENST00000393992.5_2_16:67260649-67260712:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.3068542480469	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.893	1	52.89	52.39	53.39	-0.0033035								0	0	0	0.32894	1	4597	4597		20.482	1.1219	1				62831	11057	41772	41788	71278	71278					0.0988724492780193
VLPGHRKKGVF	11	Unmodified	_VLPGHRKKGVF_					0	0	0			REV__nc|ENSG00000168477|P22105-1|TNXB	REV__nc|ENSG00000168477|P22105-1|TNXB	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.3797607421875	2	619.380032	1236.74551	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.66	1	101.93	101.43	102.43	0.26322								0	0	0	0.56276	1	12325	12325		19.997	0	1		+		62832	21491	41773	41789	71279	71279					0.136607705505412
VLPGKKGHCLV	11	Unmodified	_VLPGKKGHCLV_					0	0	0		ENSG00000106823|ENST00000344604|ECM2;nc|ENSG00000106823|O94769-2|ECM2	ENSG00000106823|ENST00000344604|ECM2	ENSG00000106823|ENST00000344604|ECM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8434448242188	2	575.841894	1149.66923	-0.31832	-0.0001833	3.1609	0.0018202	2.8426	0.0016369	575.8434817330223	103.97	0.85896	103.97	103.68	104.54	0					49	21	4	0	0	0	0.72918	1	10701	10701		26.693	6.6961	1	337380			62833	2320	41774	41790	71280	71280					0.10038630658914371
VLPGRFGA	8	Unmodified	_VLPGRFGA_					0	0	0			REV__ENST00000547411.1_1_12:29302213-29449968:+|nuORF	REV__ENST00000547411.1_1_12:29302213-29449968:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.7398376464844	2	408.739963	815.465373	-1.9297	-0.00078873	1.2966	0.00052999	-0.63302	-0.00025874	408.7403898293979	36.265	2.7501	36.265	35.98	38.73	0					137	65	3	0	0	0	0.87276	1	2244	2244		29.842	0	1	521170	+		62834	28550	41775	41791	71281	71281					0.05025854279756459
VLPGRLAGLA	10	Unmodified	_VLPGRLAGLA_					0	0	0		ENSG00000158716|ENST00000368107|DUSP23	ENSG00000158716|ENST00000368107|DUSP23	ENSG00000158716|ENST00000368107|DUSP23	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	483.92901611328125	2	483.808377	965.6022	-0.8723	-0.00042203	3.918	0.0018956	3.0457	0.0014735	483.8105545748231	26.658	0.11681	26.725	26.658	26.775	0.066875					10	4	3	0	0	0	0.37624	1	1021	1021		25.45	7.1258	1	29158			62835	5495	41776	41792	71282	71282					0.11802343439455854
VLPGSLGAV	9	Unmodified	_VLPGSLGAV_					0	0	0		ENST00000561232.5_1_15:67811374-67814126:-|nuORF	ENST00000561232.5_1_15:67811374-67814126:-|nuORF	ENST00000561232.5_1_15:67811374-67814126:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2586669921875	2	406.747453	811.480354	-0.17155	-6.9777E-05	4.3031	0.0017503	4.1315	0.0016805	406.74917294632917	57.314	1.3036	57.302	56.986	58.289	-0.012203					73	45	2	0	0	0	0.20789	1	5232	5232		18.324	0	1	79699			62836	13830	41777	41793	71283	71283					0.06707301357096185
VLPHGAGR	8	Unmodified	_VLPHGAGR_					0	0	0		ENST00000258411.7_1_2:219745349-219745679:+|nuORF	ENST00000258411.7_1_2:219745349-219745679:+|nuORF	ENST00000258411.7_1_2:219745349-219745679:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.7400817871094	2	403.735212	805.455871	1.1292	0.0004559	-0.14009	-5.6559E-05	0.98913	0.00039934	403.73511343970654	35.005	0.53686	35.386	35.06	35.597	0.3812					18	13	2	0	0	0	0.4196	1	2662	2662		20.482	8.9708	1	90871			62837	9369	41778	41794	71284	71284					0.04536085994232053
VLPIAVTTI	9	Unmodified	_VLPIAVTTI_					0	0	0			REV__ENSG00000164465|ENST00000338728|DCBLD1;REV__ENST00000478345.1_1_6:117862091-117866721:+|nuORF	REV__ENST00000478345.1_1_6:117862091-117866721:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8009338378906	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.76996	1	3371	3371		33.516	1.5607	1	210360	+		62838	21084;27379	41779	41795	71285	71285					0.11905003113804469
VLPILEIL	8	Unmodified	_VLPILEIL_					0	0	0		nc|ENSG00000141627|Q7RTS9-2|DYM;nc|ENSG00000141627|Q7RTS9|DYM;ENSG00000141627|ENST00000675505|DYM	nc|ENSG00000141627|Q7RTS9-2|DYM	nc|ENSG00000141627|Q7RTS9-2|DYM	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	455.60833740234375	2	455.304604	908.594655	-1.066	-0.00048534	-2.2809	-0.0010385	-3.3469	-0.0015238	455.3035535179794	70.562	1.5808	70.946	70.585	72.166	0.38416					55	37	3	0	0	0	0.4196	1	7863	7863		20.482	0	1	138270			62839	4518	41780	41796	71286	71286					0.1367019111917216
VLPISPLLHS	10	Unmodified	_VLPISPLLHS_					0	0	0			REV__ENST00000302538.9_1_17:909026-909185:-|nuORF	REV__ENST00000302538.9_1_17:909026-909185:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3262329101562	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.85694	1	12657	12657		21.96	4.5949	1	4041000	+		62840	24789	41781	41797	71287	71287					0.10939479408125408
VLPKVEAL	8	Unmodified	_VLPKVEAL_					0	0	0			REV__ENSG00000104419|ENST00000323851|NDRG1	REV__ENSG00000104419|ENST00000323851|NDRG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.77880859375	2	434.778754	867.542954	1.4248	0.00061948	1.7089	0.00074299	3.1337	0.0013625	434.7793959853891	33.987	1.9959	34.292	33.448	35.444	0.30494					163	48	5	0	0	0	0.884	1	2608	2608		33.516	3.674	1	7451800	+		62841	17457	41782	41798	71288	71288					0.10388447425270897
VLPLILSLPVD	11	Unmodified	_VLPLILSLPVD_					0	0	0			REV__ENST00000479701.5_1_22:50714135-50720918:-|nuORF	REV__ENST00000479701.5_1_22:50714135-50720918:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3428955078125	2	589.873382	1177.73221	0.8257	0.00048706	2.304	0.0013591	3.1297	0.0018461	590.3743278668933	93.59	0.21559	93.752	93.618	93.834	0.16118					6	4	2	0	0	0	0.17564	1	9511	9511		14.865	11.181	1	23177	+		62842	23148	41783	41799	71289	71289					0.15045474927933356
VLPLSNIL	8	Unmodified	_VLPLSNIL_					0	0	0			REV__ENSG00000120156|ENST00000380036|TEK	REV__ENSG00000120156|ENST00000380036|TEK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77838134765625	2	434.778754	867.542954	-0.14252	-6.1964E-05	3.501	0.0015222	3.3585	0.0014602	434.78017454908985	35.066	1.262	35.054	34.849	36.111	-0.012203					110	29	4	0	0	0	0.91005	1	2280	2280		42.474	0	1	2804500	+		62843	18400	41784	41800	71290	71290					0.10388447425293634
VLPNSDKK	8	Unmodified	_VLPNSDKK_					0	0	0		nc|ENSG00000116171|P22307-6|SCP2;nc|ENSG00000116171|P22307-2|SCP2;nc|ENSG00000116171|P22307-4|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2;ENSG00000116171|ENST00000371514|SCP2	nc|ENSG00000116171|P22307-6|SCP2	nc|ENSG00000116171|P22307-6|SCP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.761474609375	2	450.761092	899.507631	-1.3458	-0.00060662	1.4037	0.00063273	0.057932	2.6114E-05	450.7615375119777	37.215	0.57115	37.238	36.911	37.482	0.023621					27	13	3	0	0	0	0.81485	1	2126	2126		62.107	3.3255	1	186820			62844	2904	41785	41801	71291	71291					0.053857848974644185
VLPPFIIL	8	Unmodified	_VLPPFIIL_					0	0	0			REV__ENSG00000188324|ENST00000358433|OR6C6	REV__ENSG00000188324|ENST00000358433|OR6C6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3010559082031	2	456.301865	910.589176	-1.9367	-0.0008837	0.44582	0.00020343	-1.4908	-0.00068028	456.30190517421295	35.075	2.0362	35.075	34.654	36.69	0					139	52	4	0	0	0	0.85228	1	1960	1960		10.185	0	1	943370	+		62845	22995	41786	41802	71292	71292					0.13030512327384258
VLPPLLLL	8	Unmodified	_VLPPLLLL_					0	0	0			REV__nc|ENSG00000164530|Q6UXB8-2|PI16	REV__nc|ENSG00000164530|Q6UXB8-2|PI16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.30523681640625	2	439.30969	876.604826	0.66268	0.00029112	-3.85	-0.0016914	-3.1873	-0.0014002	439.30780532079126	68.417	0.36129	68.45	68.262	68.623	0.032997					26	14	3	0	0	0	0.94139	1	6538	6538		5.0869	0	1	58863	+		62846	21089	41787	41803	71293	71293					0.16158798844423927
VLPPLLLL	8	Unmodified	_VLPPLLLL_					0	0	0			REV__nc|ENSG00000164530|Q6UXB8-2|PI16	REV__nc|ENSG00000164530|Q6UXB8-2|PI16	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	439.30969	876.604826	-0.69862	-0.00030691	-3.0186	-0.0013261	-3.7172	-0.001633	439.3078629341492	68.509	0.25165	68.473	68.271	68.523	-0.036301	0.011646	0.0005877	NaN	5.0869	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50640	+		62847	21089	41787	41803							0.16158798844423927
VLPPLLLL	8	Unmodified	_VLPPLLLL_					0	0	0			REV__nc|ENSG00000164530|Q6UXB8-2|PI16	REV__nc|ENSG00000164530|Q6UXB8-2|PI16	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	439.30969	876.604826	0.66268	0.00029112	-3.85	-0.0016914	-3.1873	-0.0014002	439.30780532079126	68.417	0.36129	68.45	68.262	68.623	0.032997	-0.011646	-0.00014283	NaN	5.0869	26	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58863	+		62848	21089	41787	41803							0.16158798844423927
VLPPNRFKVHY	11	Unmodified	_VLPPNRFKVHY_					0	0	0			REV__ENST00000557163.1_1_14:61746812-61748042:-|nuORF	REV__ENST00000557163.1_1_14:61746812-61748042:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.2694396972656	3	457.262823	1368.76664	-1.1665	-0.00053342	0.96987	0.00044348	-0.19668	-8.9935E-05	457.59763058442746	27.766	0.26112	27.669	27.446	27.707	-0.096945					8	5	2	0	0	0	0.17863	1	1620	1620		14.086	2.4501	1	27572	+		62849	22501	41788	41804	71294	71294					0.09700735859428278
VLPPWPLQQVH	11	Unmodified	_VLPPWPLQQVH_					0	0	0		ENST00000473223.5_1_1:155184463-155187072:-|nuORF	ENST00000473223.5_1_1:155184463-155187072:-|nuORF	ENST00000473223.5_1_1:155184463-155187072:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.5860290527344	3	438.583674	1312.72919	0.18337	8.0422E-05	4.4218	0.0019393	4.6052	0.0020197	438.58559753259954	31.896	0.75173	31.879	31.582	32.334	-0.017466					85	36	4	0	0	0	0.69248	1	1480	1480		32.751	3.1998	1	379530			62850	12277	41789	41805	71295	71295					0.08533644593785539
VLPQKVPYKAM	11	Unmodified	_VLPQKVPYKAM_					0	0	0			REV__nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	REV__nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	637.3692016601562	2	637.370484	1272.72641	0.0096069	6.1232E-06	0.0080993	5.1623E-06	0.017706	1.1285E-05	637.3704089191367	105.98	2.6955	105.98	104.5	107.2	0					156	62	4	0	0	0	0.75921	2	11027	11003;11027		19.997	0	1	1384300	+		62851	19851	41790	41806	71296;71297	71297					0.10096053144616235
VLPQLLAYR	9	Unmodified	_VLPQLLAYR_					0	0	0		nc|ENSG00000136404|Q9BZW5-2|TM6SF1;ENSG00000136404|ENST00000322019|TM6SF1	nc|ENSG00000136404|Q9BZW5-2|TM6SF1	nc|ENSG00000136404|Q9BZW5-2|TM6SF1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	536.3112182617188	2	536.829309	1071.64407	-1.4951	-0.0008026	-2.8715	-0.0015415	-4.3665	-0.0023441	536.8278641725275	98.381	1.018	98.577	97.979	98.997	0.19585					38	22	2	0	0	0	0.20789	1	10122	10122		23.042	1.0826	1	117190			62852	4110	41791	41807	71298	71298					0.11110899127970697
VLPSHQHNRII	11	Unmodified	_VLPSHQHNRII_					0	0	0			REV__nc|ENSG00000095585|Q8WV28-3|BLNK	REV__nc|ENSG00000095585|Q8WV28-3|BLNK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.58538818359375	3	438.586077	1312.7364	-1.997	-0.00087587	1.0676	0.00046821	-0.92947	-0.00040765	438.58651601334884	31.993	0.97123	31.993	31.701	32.672	0					74	39	2	0	0	0	0.70584	1	1597	1597		30.569	0	1	798930	+		62853	17063	41792	41808	71299	71299					0.09254377194224617
VLPVEKES	8	Unmodified	_VLPVEKES_					0	0	0			REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	REV__nc|ENSG00000123130|Q9Y305-3|ACOT9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7548828125	2	450.755475	899.496398	-1.264	-0.00056978	-1.5875	-0.00071559	-2.8516	-0.0012854	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.884	1	7485	7485		33.516	1.5607	1	414240	+		62854	18527	41793	41809	71300	71300					0.042629628033296285
VLPVLLPIL	9	Unmodified	_VLPVLLPIL_					0	0	0			REV__ENSG00000119227|ENST00000412723|PIGZ	REV__ENSG00000119227|ENST00000412723|PIGZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	488.84234619140625	2	488.843897	975.67324	-0.085843	-4.1964E-05	-2.5869	-0.0012646	-2.6727	-0.0013066	488.8424498144115	81.401	0.64507	81.9	81.62	82.265	0.49967					34	15	3	0	0	0	0.78292	1	9422	9422		29.842	8.1392	1	455410	+		62855	18343	41794	41810	71301	71301					0.18443043424292682
VLPVRSLLMM	10	Unmodified	_VLPVRSLLMM_					0	0	0		nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013-4|ARHGEF10;ENSG00000104728|ENST00000349830|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	nc|ENSG00000104728|O15013-7|ARHGEF10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.8440551757812	2	579.840505	1157.66646	3.115	0.0018062	2.625	0.0015221	5.7399	0.0033283	579.8421153406522	102.31	1.4996	102.26	101.49	102.99	-0.047005					86	35	4	0	0	0	0.86763	1	11159	11159		26.693	3.6504	1	1243200			62856	2143	41795	41811	71302	71302					0.0939303920972634
VLQCRSFLSNL	11	Unmodified	_VLQCRSFLSNL_					0	0	0		chr4:70593395-70596999|24|85.79|0.08|10.1|+|1|AMBN,AMBN|2	chr4:70593395-70596999|24|85.79|0.08|10.1|+|1|AMBN,AMBN|2	chr4:70593395-70596999|24|85.79|0.08|10.1|+|1|AMBN,AMBN|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3462524414062	2	640.344997	1278.67544	4.5976	0.002944	-2.0096	-0.0012868	2.588	0.0016572	640.3436898921979	103.43	0.74184	103.69	103.46	104.2	0.26524					50	17	4	0	0	0	0.57736	1	12639	12639		46.457	0.48454	1	7001000			62857	430	41796	41812	71303	71303					0.04725104099793498
VLQEAYMPVS	10	Unmodified	_VLQEAYMPVS_					0	0	0			REV__ENSG00000132549|ENST00000357162|VPS13B	REV__ENSG00000132549|ENST00000357162|VPS13B	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.852783203125	2	568.78645	1135.55835	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.74	1	113.74	113.24	114.24	0								0	0	0	0.45132	1	11745	11745		19.997	0.89325	1		+		62858	19011	41797	41813	71304	71304					-0.004010538398460994
VLQKAICV	8	Unmodified	_VLQKAICV_					0	0	0		nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;nc|ENSG00000061987|Q7Z3U7-5|MON2;ENSG00000061987|ENST00000393630|MON2;nc|ENSG00000061987|Q7Z3U7-3|MON2;ENST00000551307.5_1_12:62954224-62986526:+|nuORF	nc|ENSG00000061987|Q7Z3U7-2|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2660827636719	2	437.264956	872.515359	-1.6274	-0.00071159	3.2998	0.0014429	1.6724	0.00073129	437.2663457196616	22.467	1.2654	22.516	22.142	23.407	0.048553					168	64	5	0	0	0	0.87276	1	696	696		29.842	3.0454	1	1779900			62859	1080	41798	41814	71305	71305					0.07400220893384812
VLQKIKYAFSL	11	Unmodified	_VLQKIKYAFSL_					0	0	0		ENST00000592284.5_1_19:55593146-55593922:+|nuORF;nc|ENSG00000131037|Q8TE68-4|EPS8L1;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;nc|ENSG00000131037|Q8TE68-3|EPS8L1;nc|ENSG00000131037|Q8TE68-2|EPS8L1;ENSG00000131037|ENST00000201647|EPS8L1	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.60198974609375	3	437.267463	1308.78056	-1.7045	-0.00074531	2.6828	0.0011731	0.97836	0.00042781	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.74771	1	4413	4413		22.562	5.3948	1	3449100			62860	3709	41799	41815	71306	71306					0.1385196856786024
VLQKIKYAFSL	11	Unmodified	_VLQKIKYAFSL_					0	0	0		ENST00000592284.5_1_19:55593146-55593922:+|nuORF;nc|ENSG00000131037|Q8TE68-4|EPS8L1;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;nc|ENSG00000131037|Q8TE68-3|EPS8L1;nc|ENSG00000131037|Q8TE68-2|EPS8L1;ENSG00000131037|ENST00000201647|EPS8L1	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26776123046875	3	437.267463	1308.78056	1.1681	0.00051075	-0.25998	-0.00011368	0.90808	0.00039707	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.77205	1	4442	4442		17.167	0.44936	1	4130900			62861	3709	41799	41815	71307	71307					0.1385196856786024
VLQKLNEFV	9	Unmodified	_VLQKLNEFV_					0	0	0			REV__nc|ENSG00000091106|Q9NPP4-2|NLRC4	REV__nc|ENSG00000091106|Q9NPP4-2|NLRC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.7919921875	2	545.318774	1088.623	-0.43381	-0.00023656	-2.2083	-0.0012043	-2.6422	-0.0014408	545.3176481878132	86.664	0.44896	87.108	86.731	87.18	0.44331					15	10	2	0	0	0	0.20789	1	10120	10120		23.042	4.7181	1	278120	+		62862	17005	41800	41816	71308	71308					0.08222889028479585
VLQPQPKSY	9	Unmodified	_VLQPQPKSY_					0	0	0		ENST00000477780.2_1_1:154247547-154247742:+|nuORF;ENST00000492550.1_1_1:154246365-154247742:+|nuORF;ENST00000459914.1_1_1:154247547-154248174:+|nuORF;nc|ENSG00000143575|O00165-5|HAX1;nc|ENSG00000143575|O00165-3|HAX1;ENSG00000143575|ENST00000328703|HAX1;nc|ENSG00000143575|O00165-2|HAX1	ENST00000477780.2_1_1:154247547-154247742:+|nuORF	ENST00000477780.2_1_1:154247547-154247742:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2924194335938	2	530.295299	1058.57605	-0.066725	-3.5384E-05	-3.5889	-0.0019032	-3.6556	-0.0019386	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.78058	1	9254	9254		30.504	0.18592	1	2084800			62863	4647	41801	41817	71309	71309					0.049100294773325004
VLQRLSSH	8	Unmodified	_VLQRLSSH_					0	0	0			REV__nc|ENSG00000173093|Q8NA47-2|CCDC63	REV__nc|ENSG00000173093|Q8NA47-2|CCDC63	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	471.24273681640625	2	470.272158	938.529764	-1.6565	-0.00077901	2.4257	0.0011408	0.76921	0.00036174	470.27335774922784	86.412	1.5785	86.577	85.724	87.302	0.16473					56	36	2	0	0	0	0.4196	1	8341	8341		18.324	0.95945	1	71883	+		62864	21888	41802	41818	71310	71310					0.05804009365908769
VLQRVLQLP	9	Unmodified	_VLQRVLQLP_					0	0	0		ENSG00000166819|ENST00000300055|PLIN1	ENSG00000166819|ENST00000300055|PLIN1	ENSG00000166819|ENST00000300055|PLIN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.340087890625	2	533.342584	1064.67061	-0.59229	-0.00031589	-3.6992	-0.001973	-4.2915	-0.0022888	533.340508774669	99.543	1.982	99.543	99.097	101.08	0					131	46	4	0	0	0	0.7932	1	10024	10024		23.042	1.0826	1	1199500			62865	6231	41803	41819	71311	71311					0.1408658801931324
VLQSAPSIFK	10	Unmodified	_VLQSAPSIFK_					0	0	0			REV__ENST00000341617.7_1_7:126079175-126341814:-|nuORF	REV__ENST00000341617.7_1_7:126079175-126341814:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.3170776367188	2	545.318774	1088.623	-0.33878	-0.00018475	-2.7129	-0.0014794	-3.0517	-0.0016641	545.3170953984753	102.68	0.92177	102.69	102.27	103.19	0.0082092					56	22	4	0	0	0	0.86047	1	11024	11024		23.523	1.8369	1	978870	+		62866	22345	41804	41820	71312	71312					0.08222889028479585
VLQSPKAPTY	10	Unmodified	_VLQSPKAPTY_					0	0	0			REV__ENSG00000165868|ENST00000369209|HSPA12A	REV__ENSG00000165868|ENST00000369209|HSPA12A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.3057250976562	2	552.308406	1102.60226	-0.59209	-0.00032702	-2.8479	-0.0015729	-3.44	-0.0018999	552.3067517585836	92.774	3.5075	92.774	91.304	94.812	0					259	81	5	0	0	0	0.86106	1	9213	9213		33.922	3.6039	1	1102700	+		62867	21229	41805	41821	71313	71313					0.055062986488110255
VLQYEEKHQ	9	Unmodified	_VLQYEEKHQ_					0	0	0			REV__nc|ENSG00000165732|Q9NR30-2|DDX21	REV__nc|ENSG00000165732|Q9NR30-2|DDX21	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.8199462890625	2	587.29857	1172.58259	-1.605	-0.00094263	2.6259	0.0015422	1.0209	0.00059956	587.3005521432218	47.807	0.53921	48.276	48.007	48.546	0.46941					22	13	3	0	0	0	0.20789	1	4533	4533		49.442	10.189	1	193120	+		62868	21212	41806	41822	71314	71314					0.003199226380502296
VLRAKLFTT	9	Unmodified	_VLRAKLFTT_					0	0	0			REV__nc|ENSG00000012171|Q13214-2|SEMA3B;REV__ENSG00000075223|ENST00000265361|SEMA3C;REV__ENST00000456210.5_1_3:50310607-50311978:+|nuORF	REV__ENSG00000075223|ENST00000265361|SEMA3C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8275146484375	2	524.829309	1047.64407	-0.63595	-0.00033377	-3.8081	-0.0019986	-4.4441	-0.0023324	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.78058	1	10169	10169		30.504	0.6621	1	15330000			62869	16705;16189;26952	41807	41823	71315	71315					0.12214899127980061
VLRAQPLLIL	10	Unmodified	_VLRAQPLLIL_					0	0	0			REV__ENST00000482476.1_1_X:48919453-48920147:+|nuORF	REV__ENST00000482476.1_1_X:48919453-48920147:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.8533325195312	2	568.381709	1134.74886	3.7416	0.0021267	-4.2228	-0.0024002	-0.48118	-0.00027349	568.3794689530988	102.43	0.71895	102.73	102.26	102.98	0.29865					37	16	3	0	0	0	0.37624	1	12425	12425		30.504	23.768	1	510490	+		62870	27467	41808	41824	71316	71316					0.18688020604554367
VLRASQHPKK	10	Unmodified	_VLRASQHPKK_					0	0	0		nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L;ENSG00000110427|ENST00000658780|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3529052734375	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.8651	1	12778	12778		25.574	2.0514	1	3937500			62871	2528	41809	41825	71317	71317					0.1186360713677459
VLRAVFRVC	9	Unmodified	_VLRAVFRVC_					0	0	0		ENST00000265631.9_1_7:95750097-95750145:-|nuORF	ENST00000265631.9_1_7:95750097-95750145:-|nuORF	ENST00000265631.9_1_7:95750097-95750145:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8169555664062	2	531.815679	1061.6168	1.8637	0.00099113	0.34888	0.00018554	2.2126	0.0011767	531.8157444108199	88.686	4.0119	88.613	87.337	91.349	-0.07238					352	95	5	0	0	0	0.7932	1	9119	9119		24.203	3.2558	1	4423300			62872	9508	41810	41826	71318	71318					0.08846092315957321
VLRCSVLEI	9	Unmodified	_VLRCSVLEI_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.8009643554688	2	516.299527	1030.5845	0.13063	6.7444E-05	1.7671	0.00091234	1.8977	0.00097978	516.3012953413697	57.209	1.6001	57.18	56.732	58.332	-0.028664					105	45	4	0	0	0	0.41566	1	5249	5249		56.721	3.3696	1	661070			62873	6458	41811	41827	71319	71319					0.07043260122304673
VLRDGPALG	9	Unmodified	_VLRDGPALG_					0	0	0		nc|ENSG00000204161|Q5T292-3|TMEM273;nc|ENSG00000204161|Q5T292-2|TMEM273	nc|ENSG00000204161|Q5T292-3|TMEM273	nc|ENSG00000204161|Q5T292-3|TMEM273	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2609558105469	2	449.261259	896.507966	-1.3114	-0.00058915	-0.12706	-5.7085E-05	-1.4384	-0.00064623	449.26102323069586	70.48	0.6918	70.615	70.329	71.021	0.13506					54	33	2	0	0	0	0.7932	1	6413	6413		21.96	0	1	313860			62874	15206	41812	41828	71320	71320					0.05557204617332445
VLRDNIQGITK	11	Unmodified	_VLRDNIQGITK_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.5824890136719	3	419.582221	1255.72483	0.29946	0.00012565	0.36063	0.00015131	0.66009	0.00027696	419.58231040062117	38.098	0.77636	38.414	38.094	38.87	0.31524					62	19	4	0	0	0	1.9202E-05	3	3110	3100;3110;3122		139.31	60.237	1	2229400			62875	5474	41813	41829	71321;71322;71323	71322					0.10720135380188367
VLRDNIQGITK	11	Unmodified	_VLRDNIQGITK_					0	0	0		ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000276180|ENST00000615353|H4C9;ENSG00000275126|ENST00000618305|H4C13;ENSG00000274618|ENST00000244537|H4C6;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000158406|ENST00000377727|H4C8	ENSG00000278705|ENST00000377745|H4C2	ENSG00000278705|ENST00000377745|H4C2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.5826721191406	3	419.582221	1255.72483	0.035196	1.4768E-05	0.54465	0.00022853	0.57985	0.00024329	419.58240513153555	37.96	0.82003	38.482	38.174	38.994	0.52235					59	20	5	0	0	0	1.1106E-08	3	3111	3100;3111;3124		150.15	63.27	1	1936700			62876	5474	41813	41829	71324;71325;71326	71325					0.10720135380188367
VLRDQFLRLA	10	Unmodified	_VLRDQFLRLA_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	410.9161376953125	3	410.915423	1229.72444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.573	1	16.621	16.121	17.121	0.047804								0	0	0	0.45132	1	167	167		27.047	2.8155	1		+		62877	23196	41814	41830	71327	71327					0.11876760451036716
VLREPYTVRV	10	Unmodified	_VLREPYTVRV_					0	0	0		nc|ENSG00000171587|O60469-2|DSCAM;ENSG00000171587|ENST00000400454|DSCAM	nc|ENSG00000171587|O60469-2|DSCAM	nc|ENSG00000171587|O60469-2|DSCAM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	411.24383544921875	3	411.243429	1230.70846	3.0375	0.0012491	-2.2135	-0.00091027	0.824	0.00033886	411.57688383383635	102.95	0.67481	103.25	103.07	103.74	0.29865					29	20	2	0	0	0	0.85633	1	12531	12531		21.686	2.4231	1	2406800			62878	6685	41815	41831	71328	71328					0.10233054214108961
VLRFDVRR	8	Unmodified	_VLRFDVRR_					0	0	0			REV__ENSG00000238227|ENST00000418388|TMEM250	REV__ENSG00000238227|ENST00000418388|TMEM250	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8173217773438	2	530.82235	1059.63015	-0.80686	-0.0004283	-1.6679	-0.00088534	-2.4747	-0.0013136	531.3229197876451	85.743	0.94028	85.743	85.402	86.343	0					34	21	2	0	0	0	0.4196	1	8206	8206		37.159	3.6435	1	127650	+		62879	23800	41816	41832	71329	71329					0.10271666419566827
VLRFMRRMI	9	Unmodified	_VLRFMRRMI_					0	0	0		nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C;ENSG00000224960|ENST00000412172|PPP4R3C	nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.355712890625	2	611.357188	1220.69982	1.142	0.00069816	-2.2721	-0.0013891	-1.1301	-0.00069091	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.69914	1	9779	9779		40.573	9.0428	1	17478000			62880	8704	41817	41833	71330	71330					0.09830085772296115
VLRKAGLL	8	Unmodified	_VLRKAGLL_					0	0	0		ENST00000498260.1_1_6:131894422-131900432:+|nuORF;nc|ENSG00000118520|P05089-3|ARG1;ENSG00000118520|ENST00000368087|ARG1;nc|ENSG00000118520|P05089-2|ARG1	ENST00000498260.1_1_6:131894422-131900432:+|nuORF	ENST00000498260.1_1_6:131894422-131900432:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.300048828125	2	435.300188	868.585822	0.47837	0.00020824	-0.2261	-9.8422E-05	0.25227	0.00010981	435.29993097679267	71.841	4.2983	71.971	70.597	74.895	0.1301					427	175	4	0	0	0	0.85787	1	6503	6503		9.4706	0	1	1819800			62881	3035	41818	41834	71331	71331					0.14627262273359065
VLRKLRALV	9	Unmodified	_VLRKLRALV_					0	0	0		ENST00000424845.5_1_12:53564215-53567250:-|nuORF;ENSG00000139631|ENST00000444623|CSAD;nc|ENSG00000139631|Q9Y600-3|CSAD	ENST00000424845.5_1_12:53564215-53567250:-|nuORF	ENST00000424845.5_1_12:53564215-53567250:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.7206420898438	2	534.374218	1066.73388	-0.047462	-2.5362E-05	0.24978	0.00013347	0.20231	0.00010811	534.3741499814923	74.237	1.0367	74.28	74.104	75.141	0.0429					54	37	2	0	0	0	0.20789	1	7134	7134		7.1934	0.45781	1	79883			62882	4385	41819	41835	71332	71332					0.2031857352719726
VLRKLRALV	9	Unmodified	_VLRKLRALV_					0	0	0		ENST00000424845.5_1_12:53564215-53567250:-|nuORF;ENSG00000139631|ENST00000444623|CSAD;nc|ENSG00000139631|Q9Y600-3|CSAD	ENST00000424845.5_1_12:53564215-53567250:-|nuORF	ENST00000424845.5_1_12:53564215-53567250:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	534.374218	1066.73388	-0.42579	-0.00022753	0.40855	0.00021832	-0.017239	-9.2119E-06	534.3741789092832	73.984	0.49933	74.372	74.244	74.744	0.38779	0.042035	0.00045345	NaN	7.1934	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57510			62883	4385	41819	41835							0.2031857352719726
VLRKQLCVWPA	11	Unmodified	_VLRKQLCVWPA_					0	0	0			REV__ENST00000433385.1_1_2:122416383-122416548:-|nuORF	REV__ENST00000433385.1_1_2:122416383-122416548:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.25592041015625	3	438.256792	1311.74855	1.6079	0.00070467	0.46395	0.00020333	2.0718	0.000908	438.2569039821351	29.892	1.3479	29.877	29.524	30.872	-0.015167					99	34	5	0	0	0	0.732	1	1506	1506		26.063	0	1	559550	+		62884	26649	41820	41836	71333	71333					0.10514277613037848
VLRLIGAM	8	Unmodified	_VLRLIGAM_					0	0	0			REV__ENST00000473743.5_1_2:99797706-99803390:+|nuORF	REV__ENST00000473743.5_1_2:99797706-99803390:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7738037109375	2	436.772948	871.531344	0.39754	0.00017364	0.64314	0.00028091	1.0407	0.00045454	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.82464	1	1195	1195		21.702	5.2292	1	81327	+		62885	23827	41821	41837	71334	71334					0.0904392713028983
VLRLVYEEL	9	Unmodified	_VLRLVYEEL_					0	0	0		ENST00000427434.1_1_2:88003905-88005433:+|nuORF	ENST00000427434.1_1_2:88003905-88005433:+|nuORF	ENST00000427434.1_1_2:88003905-88005433:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.32861328125	2	567.331882	1132.64921	-0.468	-0.00026551	-2.8933	-0.0016415	-3.3613	-0.001907	567.330130226139	95.712	2.0668	95.712	95.357	97.424	0					107	47	3	0	0	0	0.76996	1	9626	9626		33.516	7.9415	1	608220			62886	11573	41822	41838	71335	71335					0.08819158199935373
VLRNAGILNL	10	Unmodified	_VLRNAGILNL_					0	0	0			REV__ENSG00000085999|ENST00000371975|RAD54L	REV__ENSG00000085999|ENST00000371975|RAD54L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.8375854492188	2	541.837665	1081.66078	1.1193	0.00060646	-0.035632	-1.9307E-05	1.0836	0.00058715	541.8370205306147	35.873	1.1831	36.314	35.769	36.952	0.44043					76	29	4	0	0	0	0.24032	1	2788	2788		79.451	5.4763	1	2738500	+		62887	16904	41823	41839	71336	71336					0.1232140001393418
VLRRLSHLPG	10	Unmodified	_VLRRLSHLPG_					0	0	0			REV__nc|ENSG00000061455|Q9NQX0-2|PRDM6	REV__nc|ENSG00000061455|Q9NQX0-2|PRDM6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3580322265625	2	574.356557	1146.69856	0.86563	0.00049718	-1.9833	-0.0011391	-1.1176	-0.00064191	574.3552739338568	99.781	2.6781	99.932	98.182	100.86	0.15073					107	61	3	0	0	0	0.8651	1	10325	10325		25.574	3.6142	1	245470	+		62888	16455	41824	41840	71337	71337					0.13107910999406158
VLRRPTWLL	9	Unmodified	_VLRRPTWLL_					0	0	0			REV__ENST00000587457.1_1_19:55741658-55741895:-|nuORF	REV__ENST00000587457.1_1_19:55741658-55741895:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	577.3660278320312	2	577.36385	1152.71315	0.64819	0.00037424	3.8293	0.0022109	4.4775	0.0025852	577.3659582171192	102.04	3.0704	102.23	101.84	104.91	0.19484					206	76	5	0	0	0	0.7932	1	10717	10717		23.042	0	1	17266000	+		62889	29130	41825	41841	71338	71338					0.1428998314756882
VLRSGLTK	8	Unmodified	_VLRSGLTK_					0	0	0		ENST00000461177.1_1_9:107526521-107531179:+|nuORF;ENSG00000165028|ENST00000374762|NIPSNAP3B	ENST00000461177.1_1_9:107526521-107531179:+|nuORF	ENST00000461177.1_1_9:107526521-107531179:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.25738525390625	2	437.279452	872.544351	0.44777	0.0001958	2.8434	0.0012434	3.2912	0.0014392	437.2805070403113	30.292	0.8229	30.202	29.663	30.486	-0.089544					33	18	2	0	0	0	0.4196	1	2014	2014		25.574	5.5773	1	70710			62890	6038	41826	41842	71339	71339					0.1029808151403131
VLRTLLLKH	9	Unmodified	_VLRTLLLKH_					0	0	0		nc|ENSG00000114923|P48751-3|SLC4A3;ENSG00000114923|ENST00000358055|SLC4A3;nc|ENSG00000114923|P48751-2|SLC4A3	nc|ENSG00000114923|P48751-3|SLC4A3	nc|ENSG00000114923|P48751-3|SLC4A3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	546.8401489257812	2	546.866226	1091.7179	-1.4624	-0.00079974	-2.2674	-0.00124	-3.7298	-0.0020397	546.8650835074284	101.73	0.13197	101.88	101.82	101.95	0.15505					4	2	2	0	0	0	0.20789	1	10628	10628		37.159	8.0096	1	12264			62891	14857	41827	41843	71340	71340					0.17570867290305614
VLRVYEPL	8	Unmodified	_VLRVYEPL_					0	0	0			REV__ENSG00000141101|ENST00000268802|NOB1	REV__ENSG00000141101|ENST00000268802|NOB1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7945861816406	2	494.794935	987.575317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.98	1	22.044	21.544	22.544	0.064745								0	0	0	0.29353	1	634	634		28.254	1.4582	1		+		62892	19662	41828	41844	71341	71341					0.08103234828263339
VLSDLVYIIL	10	Unmodified	_VLSDLVYIIL_					0	0	0		ENST00000486187.5_1_10:43078026-43078305:-|nuORF	ENST00000486187.5_1_10:43078026-43078305:-|nuORF	ENST00000486187.5_1_10:43078026-43078305:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	574.3574829101562	2	574.352283	1146.69001	2.697	0.001549	3.6163	0.002077	6.3133	0.0036261	574.3542546494494	100.01	3.6253	99.959	97.817	101.44	-0.053741					163	84	2	0	0	0	0.85694	1	10907	10907		21.96	0	1	738540			62893	12574	41829	41845	71342	71342					0.12253499519556499
VLSGKYLYT	9	Unmodified	_VLSGKYLYT_					0	0	0			REV__ENST00000370872.7_1_1:75171586-75171667:-|nuORF	REV__ENST00000370872.7_1_1:75171586-75171667:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	522.2899169921875	2	522.292225	1042.5699	-1.5681	-0.00081901	-2.4048	-0.001256	-3.9729	-0.002075	522.2908474912587	36.674	0.70448	36.674	36.425	37.13	0					34	15	3	0	0	0	0.14386	1	2145	2145		84.916	15.288	1	398550	+		62894	25670	41830	41846	71343	71343					0.05031511245783804
VLSGKYLYT	9	Unmodified	_VLSGKYLYT_					0	0	0			REV__ENST00000370872.7_1_1:75171586-75171667:-|nuORF	REV__ENST00000370872.7_1_1:75171586-75171667:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	522.289306640625	2	522.292225	1042.5699	-0.46339	-0.00024202	-3.3765	-0.0017635	-3.8398	-0.0020055	522.2903084757713	36.77	0.62352	36.716	36.426	37.049	-0.053558					33	13	3	0	0	0	0.41566	1	2474	2474		56.721	5.5284	1	285150	+		62895	25670	41830	41846	71344	71344					0.05031511245783804
VLSINSKH	8	Unmodified	_VLSINSKH_					0	0	0			REV__ENSG00000134058|ENST00000256443|CDK7	REV__ENSG00000134058|ENST00000256443|CDK7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.26153564453125	2	449.261259	896.507966	-0.61479	-0.0002762	-0.29302	-0.00013164	-0.90781	-0.00040784	449.26042265951196	72.866	0.64771	72.825	72.459	73.107	-0.04039					48	22	3	0	0	0	0.88601	1	7112	7112		34.173	2.6427	1	152220	+		62896	19112	41831	41847	71345	71345					0.05557204617332445
VLSINSKH	8	Unmodified	_VLSINSKH_					0	0	0			REV__ENSG00000134058|ENST00000256443|CDK7	REV__ENSG00000134058|ENST00000256443|CDK7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2603759765625	2	449.261259	896.507966	0.037787	1.6976E-05	-1.6093	-0.00072298	-1.5715	-0.000706	449.260464463793	72.138	1.197	72.688	72.279	73.476	0.55008					69	28	4	0	0	0	0.87064	1	8102	8102		29.15	4.9468	1	1304500	+		62897	19112	41831	41847	71346	71346					0.05557204617332445
VLSKHLTGVQR	11	Unmodified	_VLSKHLTGVQR_					0	0	0			REV__nc|ENSG00000103067|Q9H6T0|ESRP2	REV__nc|ENSG00000103067|Q9H6T0|ESRP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.3712158203125	2	619.372404	1236.73025	0.91931	0.0005694	-1.0988	-0.00068059	-0.17952	-0.00011119	619.3720836676316	101.53	1.7011	101.67	101.29	102.99	0.14102					92	41	4	0	0	0	0.77061	1	10618	10618		17.468	6.6025	1	2053400	+		62898	17386	41832	41848	71347	71347					0.12135858962687962
VLSKKGDYLKY	11	Unmodified	_VLSKKGDYLKY_					0	0	0		nc|ENSG00000122642|O95302-3|FKBP9;ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	nc|ENSG00000122642|O95302-3|FKBP9	nc|ENSG00000122642|O95302-3|FKBP9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.5858154296875	3	438.586972	1312.73909	-1.997	-0.00087587	-0.97335	-0.0004269	-2.9704	-0.0013028	438.58651601334884	31.993	0.97123	31.993	31.701	32.672	0					74	39	2	0	0	0	0.71803	1	1563	1563		28.577	0	1	798930			62899	3236	41833	41849	71348	71348					0.09522787808509747
VLSKKGDYLKY	11	Unmodified	_VLSKKGDYLKY_					0	0	0		nc|ENSG00000122642|O95302-3|FKBP9;ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	nc|ENSG00000122642|O95302-3|FKBP9	nc|ENSG00000122642|O95302-3|FKBP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.5856628417969	3	438.586972	1312.73909	0.076565	3.3581E-05	-3.1212	-0.0013689	-3.0447	-0.0013354	438.5856740395665	31.935	0.78642	31.946	31.626	32.413	0.0109					48	21	3	0	0	0	0.70584	1	1769	1769		30.569	4.5055	1	365660			62900	3236	41833	41849	71349	71349					0.09522787808509747
VLSKKGDYLKY	11	Unmodified	_VLSKKGDYLKY_					0	0	0		nc|ENSG00000122642|O95302-3|FKBP9;ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	nc|ENSG00000122642|O95302-3|FKBP9	nc|ENSG00000122642|O95302-3|FKBP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.5858154296875	3	438.586972	1312.73909	-0.31812	-0.00013952	-2.47	-0.0010833	-2.7881	-0.0012228	438.58583203796974	32.135	1.0839	32.084	31.686	32.77	-0.051033					43	23	2	0	0	0	0.74771	1	1862	1862		22.562	0	1	448770			62901	3236	41833	41849	71350	71350					0.09522787808509747
VLSKKGDYLKY	11	Unmodified	_VLSKKGDYLKY_					0	0	0		nc|ENSG00000122642|O95302-3|FKBP9;ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	nc|ENSG00000122642|O95302-3|FKBP9	nc|ENSG00000122642|O95302-3|FKBP9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.5856628417969	3	438.586972	1312.73909	1.1659	0.00051134	-4.018	-0.0017622	-2.8521	-0.0012509	438.58516849233104	31.929	1.1484	31.923	31.521	32.669	-0.0061455					44	26	2	0	0	0	0.70584	1	1794	1794		30.569	0.25114	1	409390			62902	3236	41833	41849	71351	71351					0.09522787808509747
VLSMKHTKDRV	11	Unmodified	_VLSMKHTKDRV_					0	0	0		ENSG00000131043|ENST00000320849|AAR2	ENSG00000131043|ENST00000320849|AAR2	ENSG00000131043|ENST00000320849|AAR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.58563232421875	3	438.583456	1312.72854	-0.85727	-0.00037599	4.3685	0.0019159	3.5112	0.0015399	438.58603368368296	31.551	0.945	31.631	31.297	32.242	0.079834					66	21	4	0	0	0	0.69248	2	2150	2129;2150		32.751	4.1738	1	2788200			62903	3710	41834	41850	71352;71353	71353					0.08468481882437118
VLSNDVGQL	9	Unmodified	_VLSNDVGQL_					0	0	0			REV__ENSG00000110427|ENST00000658780|KIAA1549L	REV__ENSG00000110427|ENST00000658780|KIAA1549L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7552490234375	2	472.756007	943.497461	-0.28077	-0.00013274	0.4154	0.00019638	0.13463	6.3647E-05	472.7560511356496	25.548	0.77612	25.507	25.111	25.888	-0.04117					46	21	3	0	0	0	0.41566	1	1090	1090		56.721	0	1	114310	+		62904	17812	41835	41851	71354	71354					0.023451771722420744
VLSPADKTN	9	Unmodified	_VLSPADKTN_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7556457519531	2	472.756007	943.497461	-0.28077	-0.00013274	0.4154	0.00019638	0.13463	6.3647E-05	472.7560511356496	25.548	0.77612	25.507	25.111	25.888	-0.04117					46	21	3	0	0	0	0.41984	1	1079	1079		56.434	6.4093	1	114310			62905	7934	41836	41852	71355	71355					0.023451771722307058
VLSPADKTNV	10	Unmodified	_VLSPADKTNV_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	522.2896118164062	2	522.290214	1042.56587	-1.5681	-0.00081901	1.4463	0.00075537	-0.12185	-6.364E-05	522.2908474912587	36.674	0.70448	36.674	36.425	37.13	0					34	15	3	0	0	0	0.081562	1	2157	2157		104.01	39.806	1	398550			62906	7934	41837	41853	71356	71356					0.04629421752088092
VLSPADKTNV	10	Unmodified	_VLSPADKTNV_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	522.2911987304688	2	522.290214	1042.56587	0.060787	3.1748E-05	0.021023	1.098E-05	0.08181	4.2728E-05	522.28999387396	36.822	1.0695	36.803	36.509	37.578	-0.018673					41	23	3	0	0	0	0.86106	1	2407	2407		33.922	1.1092	1	237130			62907	7934	41837	41853	71357	71357					0.04629421752088092
VLSPADKTNV	10	Unmodified	_VLSPADKTNV_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	522.2894897460938	2	522.290214	1042.56587	-0.82154	-0.00042908	0.91055	0.00047557	0.089005	4.6486E-05	522.2904861090643	36.723	0.80389	36.735	36.391	37.195	0.011173					35	17	3	0	0	0	0.2953	2	2422	2396;2422		72.879	14.382	1	201110			62908	7934	41837	41853	71358;71359	71359					0.04629421752088092
VLSPADKTNV	10	Unmodified	_VLSPADKTNV_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	522.290214	1042.56587	-0.46339	-0.00024202	0.4746	0.00024788	0.011209	5.8543E-06	522.2903084757713	36.77	0.62352	36.716	36.426	37.049	-0.053558	0.043711	8.7434E-05	NaN	104.01	33	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	285150			62909	7934	41837	41853							0.04629421752088092
VLSPADKTNV	10	Unmodified	_VLSPADKTNV_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	522.290214	1042.56587	-0.28472	-0.00014871	0.27571	0.000144	-0.0090114	-4.7066E-06	522.2902224172531	36.803	0.67313	36.827	36.562	37.235	0.023621	0.15401	-0.00012032	NaN	104.01	40	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	396480			62910	7934	41837	41853							0.04629421752088092
VLSPADKTNV	10	Unmodified	_VLSPADKTNV_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	522.290214	1042.56587	0.24575	0.00012835	-0.12985	-6.7817E-05	0.11591	6.0537E-05	522.2900052186054	36.567	0.79751	36.671	36.281	37.079	0.10306	-0.0021435	-0.00054395	NaN	104.01	50	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	370060			62911	7934	41837	41853							0.04629421752088092
VLSPADKTNV	10	Unmodified	_VLSPADKTNV_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	522.290214	1042.56587	0.2831	0.00014786	-0.19696	-0.00010287	0.086141	4.499E-05	522.2899520493401	36.685	0.73725	36.625	36.34	37.077	-0.060333	-0.048103	-0.00061406	NaN	104.01	53	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	314430			62912	7934	41837	41853							0.04629421752088092
VLSPADKTNV	10	Unmodified	_VLSPADKTNV_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	522.290214	1042.56587	1.0148	0.00053003	-0.19561	-0.00010216	0.81922	0.00042787	522.2896939628142	36.199	0.97805	36.481	36.115	37.093	0.28173	-0.19191	-0.00061265	NaN	104.01	45	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	453960			62913	7934	41837	41853							0.04629421752088092
VLSPADKTNV	10	Unmodified	_VLSPADKTNV_					0	0	0		ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF;ENST00000397797.1_1_16:226715-226977:+|nuORF	ENSG00000206172|ENST00000320868|HBA1	ENSG00000206172|ENST00000320868|HBA1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	522.290214	1042.56587	1.5864	0.00082857	-1.1906	-0.00062184	0.39582	0.00020673	522.2893357976667	36.083	0.81911	36.524	36.295	37.115	0.44043	-0.14894	-0.001652	NaN	104.01	47	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	351610			62914	7934	41837	41853							0.04629421752088092
VLSPAGLLL	9	Unmodified	_VLSPAGLLL_					0	0	0			REV__ENST00000560079.6_1_15:85345654-85346083:+|nuORF	REV__ENST00000560079.6_1_15:85345654-85346083:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78839111328125	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.7932	1	3100	3100		24.203	0	1	448230	+		62915	28752	41838	41854	71360	71360					0.11308733942325944
VLSPFMTF	8	Unmodified	_VLSPFMTF_					0	0	0			REV__ENST00000447668.2_1_2:122407746-122408084:+|nuORF	REV__ENST00000447668.2_1_2:122407746-122408084:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.2433776855469	2	471.243689	940.472826	0.94832	0.00044689	-0.92471	-0.00043576	0.023603	1.1123E-05	471.243171462268	85.882	3.6525	85.808	84.627	88.28	-0.073761					151	84	2	0	0	0	0.884	1	8816	8816		33.516	9.3128	1	287660	+		62916	26824	41839	41855	71361	71361					0.00020825765170684463
VLSPIVSRDG	10	Unmodified	_VLSPIVSRDG_					0	0	0			REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7985229492188	2	521.798206	1041.58186	0.84917	0.00044309	-0.80867	-0.00042196	0.0405	2.1133E-05	521.7976087696168	32.59	0.51046	32.802	32.55	33.061	0.21168					29	11	3	0	0	0	0.37206	1	2297	2297		66.429	0	1	436760	+		62917	25258	41840	41856	71362	71362					0.0627312798899311
VLSPIVSRDG	10	Unmodified	_VLSPIVSRDG_					0	0	0			REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	521.798206	1041.58186	0.069541	3.6286E-05	-1.0143	-0.00052927	-0.94478	-0.00049298	521.7974469910996	33.028	0.66186	32.974	32.626	33.288	-0.05434	0.085923	0.0013774	NaN	66.429	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51063	+		62918	25258	41840	41856							0.0627312798899311
VLSPIVSRDG	10	Unmodified	_VLSPIVSRDG_					0	0	0			REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	521.798206	1041.58186	0.1211	6.319E-05	-0.26559	-0.00013858	-0.14449	-7.5394E-05	521.7982159776445	32.852	0.54301	32.85	32.627	33.17	-0.0016365	-0.038147	0.0021587	NaN	66.429	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69734	+		62919	25258	41840	41856							0.0627312798899311
VLSPIVSRDG	10	Unmodified	_VLSPIVSRDG_					0	0	0			REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	521.798206	1041.58186	-0.3004	-0.00015675	-4.9811	-0.0025991	-5.2815	-0.0027559	521.7943612101338	32.839	0.10084	32.892	32.812	32.913	0.05246	0.0033724	-0.0027624	NaN	66.429	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64369	+		62920	25258	41840	41856							0.0627312798899311
VLSPIVSRDG	10	Unmodified	_VLSPIVSRDG_					0	0	0			REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	521.798206	1041.58186	0.41674	0.00021745	-0.72998	-0.0003809	-0.31324	-0.00016345	521.7978566542865	32.913	0.3166	32.88	32.676	32.992	-0.032681	-0.0080779	0.0016741	NaN	66.429	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68817	+		62921	25258	41840	41856							0.0627312798899311
VLSPIVSRDG	10	Unmodified	_VLSPIVSRDG_					0	0	0			REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	REV__ENST00000341307.6_1_11:63526084-63526171:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	521.798206	1041.58186	0.84917	0.00044309	-0.80867	-0.00042196	0.0405	2.1133E-05	521.7976087696168	32.59	0.51046	32.802	32.55	33.061	0.21168	-0.086067	0.001592	NaN	66.429	29	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	436760	+		62922	25258	41840	41856							0.0627312798899311
VLSPPHIKAD	10	Unmodified	_VLSPPHIKAD_					0	0	0		nc|ENSG00000165006|Q9NZ09-2|UBAP1;ENSG00000165006|ENST00000297661|UBAP1;nc|ENSG00000165006|Q9NZ09-3|UBAP1;nc|ENSG00000165006|Q9NZ09-4|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.8065795898438	2	538.808574	1075.60259	-0.72484	-0.00039055	-3.261	-0.001757	-3.9858	-0.0021476	538.8068164493593	88.616	2.5677	88.616	87.035	89.603	0					119	59	4	0	0	0	0.82886	1	8506	8506		37.812	0	1	262770			62923	6037	41841	41857	71363	71363					0.06781718368642942
VLSPPHIKAD	10	Unmodified	_VLSPPHIKAD_					0	0	0		nc|ENSG00000165006|Q9NZ09-2|UBAP1;ENSG00000165006|ENST00000297661|UBAP1;nc|ENSG00000165006|Q9NZ09-3|UBAP1;nc|ENSG00000165006|Q9NZ09-4|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	538.808574	1075.60259	-0.16831	-9.0687E-05	-3.6895	-0.0019879	-3.8578	-0.0020786	538.8064887277872	88.56	2.3741	88.628	86.967	89.341	0.068161	0.15126	0.00044839	NaN	37.812	119	55	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	363140			62924	6037	41841	41857							0.06781718368642942
VLSPPHIKAD	10	Unmodified	_VLSPPHIKAD_					0	0	0		nc|ENSG00000165006|Q9NZ09-2|UBAP1;ENSG00000165006|ENST00000297661|UBAP1;nc|ENSG00000165006|Q9NZ09-3|UBAP1;nc|ENSG00000165006|Q9NZ09-4|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	538.808574	1075.60259	1.9999	0.0010776	-5.8239	-0.003138	-3.824	-0.0020604	538.805336053198	88.442	2.7034	88.368	86.86	89.563	-0.074005	-0.10872	-0.0018517	NaN	37.812	158	63	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	365400			62925	6037	41841	41857							0.06781718368642942
VLSPPHIKAD	10	Unmodified	_VLSPPHIKAD_					0	0	0		nc|ENSG00000165006|Q9NZ09-2|UBAP1;ENSG00000165006|ENST00000297661|UBAP1;nc|ENSG00000165006|Q9NZ09-3|UBAP1;nc|ENSG00000165006|Q9NZ09-4|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	538.808574	1075.60259	1.1503	0.00061977	-4.9505	-0.0026674	-3.8002	-0.0020476	538.8058028739993	88.309	2.5356	88.36	86.862	89.398	0.050407	-0.11691	-0.00091047	NaN	37.812	132	59	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	367700			62926	6037	41841	41857							0.06781718368642942
VLSPPHIKAD	10	Unmodified	_VLSPPHIKAD_					0	0	0		nc|ENSG00000165006|Q9NZ09-2|UBAP1;ENSG00000165006|ENST00000297661|UBAP1;nc|ENSG00000165006|Q9NZ09-3|UBAP1;nc|ENSG00000165006|Q9NZ09-4|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	538.808574	1075.60259	0.054453	2.934E-05	-3.8569	-0.0020781	-3.8025	-0.0020488	538.8063281677478	88.217	2.6513	88.418	86.855	89.507	0.20114	-0.058997	0.00026798	NaN	37.812	147	62	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	389480			62927	6037	41841	41857							0.06781718368642942
VLSPPHIKAD	10	Unmodified	_VLSPPHIKAD_					0	0	0		nc|ENSG00000165006|Q9NZ09-2|UBAP1;ENSG00000165006|ENST00000297661|UBAP1;nc|ENSG00000165006|Q9NZ09-3|UBAP1;nc|ENSG00000165006|Q9NZ09-4|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	538.808574	1075.60259	0.72932	0.00039296	-4.582	-0.0024688	-3.8527	-0.0020759	538.80599729391	88.399	2.4889	88.549	87.122	89.611	0.15055	0.072675	-0.00051341	NaN	37.812	139	58	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	352280			62928	6037	41841	41857							0.06781718368642942
VLSPPHIKAD	10	Unmodified	_VLSPPHIKAD_					0	0	0		nc|ENSG00000165006|Q9NZ09-2|UBAP1;ENSG00000165006|ENST00000297661|UBAP1;nc|ENSG00000165006|Q9NZ09-3|UBAP1;nc|ENSG00000165006|Q9NZ09-4|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	538.808574	1075.60259	-1.4854	-0.00080035	-2.2984	-0.0012384	-3.7838	-0.0020388	538.8071955476461	88.283	2.2936	88.452	87.002	89.296	0.16922	-0.024785	0.0019475	NaN	37.812	130	53	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	366330			62929	6037	41841	41857							0.06781718368642942
VLSPPHIKAD	10	Unmodified	_VLSPPHIKAD_					0	0	0		nc|ENSG00000165006|Q9NZ09-2|UBAP1;ENSG00000165006|ENST00000297661|UBAP1;nc|ENSG00000165006|Q9NZ09-3|UBAP1;nc|ENSG00000165006|Q9NZ09-4|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	nc|ENSG00000165006|Q9NZ09-2|UBAP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	538.808574	1075.60259	0.24638	0.00013275	-3.9858	-0.0021476	-3.7394	-0.0020148	538.8067314928682	87.974	2.4247	88.423	87.35	89.775	0.44892	-0.053518	0.00012908	NaN	37.812	83	58	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	397270			62930	6037	41841	41857							0.06781718368642942
VLSQKVIAH	9	Unmodified	_VLSQKVIAH_					0	0	0		ENSG00000136371|ENST00000258874|MTHFS	ENSG00000136371|ENST00000258874|MTHFS	ENSG00000136371|ENST00000258874|MTHFS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.8055725097656	2	497.805834	993.597115	-1.4797	-0.00073661	1.7891	0.00089063	0.3094	0.00015402	497.8063746782886	29.876	0.65602	29.904	29.662	30.318	0.028618					39	14	5	0	0	0	0.43338	1	1919	1919		55.504	6.0627	1	264070			62931	4107	41842	41858	71364	71364					0.1000603957684234
VLSQKVIAH	9	Unmodified	_VLSQKVIAH_					0	0	0		ENSG00000136371|ENST00000258874|MTHFS	ENSG00000136371|ENST00000258874|MTHFS	ENSG00000136371|ENST00000258874|MTHFS	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	497.805834	993.597115	0.13497	6.7187E-05	-0.05039	-2.5085E-05	0.084576	4.2102E-05	497.80567555352513	30.035	0.69124	29.945	29.663	30.354	-0.089546	0.02033	-0.00063971	NaN	55.504	33	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	288640			62932	4107	41842	41858							0.1000603957684234
VLSQLKNLDLS	11	Unmodified	_VLSQLKNLDLS_					0	0	0		ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	ENSG00000167178|ENST00000453268|ISLR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.3590087890625	2	615.358628	1228.7027	-0.35839	-0.00022054	-1.6201	-0.00099692	-1.9785	-0.0012175	615.3576084899992	104.75	2.3818	104.73	104.28	106.66	-0.014809					147	56	4	0	0	0	0.69995	1	11395	11395		31.53	1.2121	1	1933000			62933	6271	41843	41859	71365	71365					0.09749910911796178
VLSQVQLQQ	9	Unmodified	_VLSQVQLQQ_					0	0	0		nc|ENSG00000211956|P06331|IGHV4-34;nc|ENSG00000211933|A0A0B4J1U7|IGHV6-1	nc|ENSG00000211956|P06331|IGHV4-34	nc|ENSG00000211956|P06331|IGHV4-34	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.7979736328125	2	521.798206	1041.58186	0.52673	0.00027485	-0.7232	-0.00037736	-0.19647	-0.00010252	521.7976346265104	32.615	0.47147	32.741	32.546	33.018	0.12643					25	10	3	0	0	0	0.31972	1	2303	2303		63.306	4.5243	1	462500			62934	15243	41844	41860	71366	71366					0.06273127989015848
VLSRGTHGG	9	Unmodified	_VLSRGTHGG_					0	0	0		nc|ENSG00000165272|Q92482-2|AQP3;ENST00000493581.1_1_9:33443725-33447528:-|nuORF;ENST00000463983.5_1_9:33443205-33447528:-|nuORF;ENSG00000165272|ENST00000297991|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2405090332031	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.72402	1	7693	7693		38.806	1.647	1	716910			62935	15067	41845	41861	71367	71367					0.02122863297722688
VLSRGTHGG	9	Unmodified	_VLSRGTHGG_					0	0	0		nc|ENSG00000165272|Q92482-2|AQP3;ENST00000493581.1_1_9:33443725-33447528:-|nuORF;ENST00000463983.5_1_9:33443205-33447528:-|nuORF;ENSG00000165272|ENST00000297991|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	442.2406311035156	2	442.240858	882.467164	0.39969	0.00017676	-0.1663	-7.3547E-05	0.23338	0.00010321	442.2406884537043	81.568	5.4856	81.505	79.976	85.462	-0.062935					353	136	4	0	0	0	0.64922	1	8399	8399		44.117	8.4985	1	1238700			62936	15067	41845	41861	71368	71368					0.02122863297722688
VLSRGTHGG	9	Unmodified	_VLSRGTHGG_					0	0	0		nc|ENSG00000165272|Q92482-2|AQP3;ENST00000493581.1_1_9:33443725-33447528:-|nuORF;ENST00000463983.5_1_9:33443205-33447528:-|nuORF;ENSG00000165272|ENST00000297991|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.24078369140625	2	442.240858	882.467164	0.21245	9.3954E-05	-0.1421	-6.2841E-05	0.070351	3.1112E-05	442.2406789125666	81.441	4.3186	81.941	80.29	84.609	0.49967					223	104	3	0	0	0	0.64922	1	9412	9412		44.117	8.4985	1	1030200			62937	15067	41845	41861	71369	71369					0.02122863297722688
VLSRPTPQLRA	11	Unmodified	_VLSRPTPQLRA_					0	0	0		nc|ENSG00000172575|O95267-4|RASGRP1;nc|ENSG00000172575|O95267-5|RASGRP1;nc|ENSG00000172575|O95267-3|RASGRP1;nc|ENSG00000172575|O95267-2|RASGRP1;ENSG00000172575|ENST00000310803|RASGRP1	nc|ENSG00000172575|O95267-4|RASGRP1	nc|ENSG00000172575|O95267-4|RASGRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.375244140625	2	619.372404	1236.73025	0.91931	0.0005694	-1.0988	-0.00068059	-0.17952	-0.00011119	619.3720836676316	101.53	1.7011	101.67	101.29	102.99	0.14102					92	41	4	0	0	0	0.73621	1	10711	10711		25.126	4.1791	1	2053400			62938	6778	41846	41862	71370	71370					0.12135858962687962
VLSRSGVR	8	Unmodified	_VLSRSGVR_					0	0	0		ENST00000372695.5_1_X:102470037-102470112:+|nuORF	ENST00000372695.5_1_X:102470037-102470112:+|nuORF	ENST00000372695.5_1_X:102470037-102470112:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2672424316406	2	437.266876	872.519199	-0.36504	-0.00015962	-2.3712	-0.0010368	-2.7362	-0.0011965	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.87922	1	1108	1108		31.955	1.4512	1	1300600			62939	10711	41847	41863	71371	71371					0.07784026711476599
VLSSAPLLTHL	11	Unmodified	_VLSSAPLLTHL_					0	0	0			REV__ENST00000392547.6_1_2:175427025-175427217:-|nuORF	REV__ENST00000392547.6_1_2:175427025-175427217:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8411865234375	2	575.845156	1149.67576	-0.99796	-0.00057467	-2.8602	-0.001647	-3.8582	-0.0022217	575.8433464319414	90.672	2.8412	90.741	88.754	91.595	0.069328					215	67	4	0	0	0	0.61774	1	9409	9409		42.396	0	1	1885000	+		62940	26022	41848	41864	71372	71372					0.10690847091291289
VLSSEKLFVKY	11	Unmodified	_VLSSEKLFVKY_					0	0	0		ENSG00000171806|ENST00000310392|METTL18	ENSG00000171806|ENST00000310392|METTL18	ENSG00000171806|ENST00000310392|METTL18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.257568359375	3	438.255223	1311.74384	1.6079	0.00070467	4.045	0.0017727	5.6529	0.0024774	438.2569039821351	29.892	1.3479	29.877	29.524	30.872	-0.015167					99	34	5	0	0	0	0.62914	1	1550	1550		41.08	8.3295	1	559550			62941	6712	41849	41865	71373	71373					0.10043671951279975
VLSSRVRTG	9	Unmodified	_VLSSRVRTG_					0	0	0		ENSG00000131730|ENST00000254035|CKMT2;ENST00000514086.5_1_5:80550748-80553554:+|nuORF;ENST00000505135.1_1_5:80548598-80553554:+|nuORF;ENSG00000166165|ENST00000348956|CKB;ENSG00000104879|ENST00000221476|CKM;ENSG00000237289|ENST00000441322|CKMT1B;ENSG00000223572|ENST00000413453|CKMT1A;nc|ENSG00000237289|P12532-2|CKMT1A	ENSG00000131730|ENST00000254035|CKMT2;ENSG00000237289|ENST00000441322|CKMT1B	ENSG00000131730|ENST00000254035|CKMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906799316406	2	487.790715	973.566878	-0.085473	-4.1693E-05	-0.089202	-4.3512E-05	-0.17467	-8.5205E-05	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.78983	1	8373	8373		27.882	3.6795	1	1889700			62942	3744;8699	41850	41866	71374	71374					0.07903680911658739
VLSVAPFH	8	Unmodified	_VLSVAPFH_					0	0	0			REV__ENST00000280481.8_1_13:39261339-39261684:+|nuORF	REV__ENST00000280481.8_1_13:39261339-39261684:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2504577636719	2	435.247621	868.480688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.963	1	27.072	26.572	27.572	0.10901								0	0	0	0.29831	1	1054	1054		39.021	8.5179	1		+		62943	24604	41851	41867	71375	71375					0.04118721076940801
VLSWGRVLP	9	Unmodified	_VLSWGRVLP_					0	0	0		ENST00000492390.5_1_1:1636243-1639660:-|nuORF;ENST00000474916.1_1_1:1636243-1639664:-|nuORF	ENST00000492390.5_1_1:1636243-1639660:-|nuORF	ENST00000492390.5_1_1:1636243-1639660:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8071899414062	2	513.808377	1025.6022	-0.22351	-0.00011484	1.6547	0.00085019	1.4312	0.00073535	513.8091977878661	50.938	0.75373	50.946	50.757	51.511	0.0077438					49	23	3	0	0	0	0.7932	1	4411	4411		26.693	3.6504	1	174420			62944	12314	41852	41868	71376	71376					0.09042343439477918
VLSWGRVLP	9	Unmodified	_VLSWGRVLP_					0	0	0		ENST00000492390.5_1_1:1636243-1639660:-|nuORF;ENST00000474916.1_1_1:1636243-1639664:-|nuORF	ENST00000492390.5_1_1:1636243-1639660:-|nuORF	ENST00000492390.5_1_1:1636243-1639660:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8091430664062	2	513.808377	1025.6022	0.36714	0.00018864	1.0087	0.00051826	1.3758	0.0007069	513.8088609518841	50.93	1.0953	50.98	50.541	51.637	0.049896					79	32	3	0	0	0	0.78983	1	4080	4080		27.882	3.6795	1	394250			62945	12314	41852	41868	71377	71377					0.09042343439477918
VLTASTFT	8	Unmodified	_VLTASTFT_					0	0	0			REV__ENSG00000166897|ENST00000402918|ELFN2	REV__ENSG00000166897|ENST00000402918|ELFN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2264404296875	2	420.229094	838.443634	-0.18786	-7.8944E-05	-2.8091	-0.0011805	-2.997	-0.0012594	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.89457	1	7310	7310		37.028	8.7742	1	279000	+		62946	21336	41853	41869	71378	71378					0.01795004740540662
VLTCLPAPSA	10	Unmodified	_VLTCLPAPSA_					0	0	0		ENST00000481886.5_1_1:33546883-33547063:+|nuORF	ENST00000481886.5_1_1:33546883-33547063:+|nuORF	ENST00000481886.5_1_1:33546883-33547063:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.26702880859375	2	486.265153	970.515753	0.66104	0.00032144	3.4294	0.0016676	4.0905	0.0019891	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.5766	1	8607	8607		51.335	9.9088	1	1702800			62947	12475	41854	41870	71379	71379					0.029315958225765826
VLTGLHFSRRQ	11	Unmodified	_VLTGLHFSRRQ_					0	0	0			REV__ENST00000337179.9_1_12:93771723-93771948:+|nuORF	REV__ENST00000337179.9_1_12:93771723-93771948:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.5854797363281	3	438.586077	1312.7364	0.11756	5.1558E-05	-1.0172	-0.00044614	-0.89967	-0.00039458	438.5855891612591	31.805	0.71013	31.916	31.605	32.316	0.11117					105	33	4	0	0	0	0.71803	1	1484	1484		28.577	1.827	1	385090	+		62948	25202	41855	41871	71380	71380					0.09254377194224617
VLTGTKDT	8	Unmodified	_VLTGTKDT_					0	0	0		ENSG00000167676|ENST00000301286|PLIN4	ENSG00000167676|ENST00000301286|PLIN4	ENSG00000167676|ENST00000301286|PLIN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.732177734375	2	417.732	833.449448	-0.0052279	-2.1839E-06	1.9193	0.00080176	1.9141	0.00079957	417.7327376572525	32.779	0.59648	32.79	32.492	33.088	0.010899					25	14	2	0	0	0	0.86288	1	1850	1850		26.796	1.3459	1	114650			62949	6316	41856	41872	71381	71381					0.026061032521852212
VLTGTKDT	8	Unmodified	_VLTGTKDT_					0	0	0		ENSG00000167676|ENST00000301286|PLIN4	ENSG00000167676|ENST00000301286|PLIN4	ENSG00000167676|ENST00000301286|PLIN4	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	417.732	833.449448	2.081	0.00086929	-0.19821	-8.28E-05	1.8828	0.00078649	417.731830090056	32.797	0.63062	32.795	32.493	33.123	-0.0016365	-0.12408	-0.0012569	NaN	26.796	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133170			62950	6316	41856	41872							0.026061032521852212
VLTGTKDT	8	Unmodified	_VLTGTKDT_					0	0	0		ENSG00000167676|ENST00000301286|PLIN4	ENSG00000167676|ENST00000301286|PLIN4	ENSG00000167676|ENST00000301286|PLIN4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	417.732	833.449448	0.71321	0.00029793	1.2827	0.00053581	1.9959	0.00083374	417.7323336830872	32.901	0.29624	33.071	32.849	33.145	0.16971	0.15141	-1.9693E-05	NaN	26.796	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68968			62951	6316	41856	41872							0.026061032521852212
VLTGTKDT	8	Unmodified	_VLTGTKDT_					0	0	0		ENSG00000167676|ENST00000301286|PLIN4	ENSG00000167676|ENST00000301286|PLIN4	ENSG00000167676|ENST00000301286|PLIN4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	417.732	833.449448	0.91177	0.00038087	0.3181	0.00013288	1.2299	0.00051375	417.7324527194299	32.846	0.59172	33.058	32.636	33.228	0.21168	0.13846	-0.00082555	NaN	26.796	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88139			62952	6316	41856	41872							0.026061032521852212
VLTITLPAV	9	Unmodified	_VLTITLPAV_					0	0	0			REV__nc|ENSG00000125675|P42263|GRIA3	REV__nc|ENSG00000125675|P42263|GRIA3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8004150390625	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3040	3040		11.511	0	1	942760	+		62953	29824	41857	41873	71382	71382					0.11905003113804469
VLTLASARASD	11	Unmodified	_VLTLASARASD_					0	0	0		ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	ENSG00000148357|ENST00000683500|HMCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.3062744140625	2	552.306395	1102.59824	0.26261	0.00014504	-0.18156	-0.00010027	0.081052	4.4766E-05	552.3062085877633	92.385	3.9963	92.608	91.223	95.219	0.2227					271	95	5	0	0	0	0.64498	1	9481	9481		39.253	0	1	1950800			62954	4956	41858	41874	71383	71383					0.05104209155092576
VLTLEQRKFY	10	Unmodified	_VLTLEQRKFY_					0	0	0		ENSG00000107537|ENST00000263038|PHYH;ENST00000463730.1_1_10:13337446-13342087:-|nuORF	ENSG00000107537|ENST00000263038|PHYH	ENSG00000107537|ENST00000263038|PHYH	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3594360351562	2	648.869163	1295.72377	-0.023314	-1.5128E-05	3.9055	0.0025341	3.8822	0.002519	648.8718934238251	99.773	2.6976	99.773	98.424	101.12	0					124	64	3	0	0	0	0.37624	1	10011	10011		19.997	0	1	156470			62955	2349	41859	41875	71384	71384					0.08773921011311359
VLTLLLFIARA	11	Unmodified	_VLTLLLFIARA_					0	0	0		ENSG00000166111|ENST00000610966|SVOP	ENSG00000166111|ENST00000610966|SVOP	ENSG00000166111|ENST00000610966|SVOP	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	615.6802978515625	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.69	1	63.69	63.19	64.19	0								0	0	0	0.56276	1	5588	5588		18.262	1.5447	1				62956	6155	41860	41876	71385	71385					0.18548576293073893
VLTLLLFIARA	11	Unmodified	_VLTLLLFIARA_					0	0	0		ENSG00000166111|ENST00000610966|SVOP	ENSG00000166111|ENST00000610966|SVOP	ENSG00000166111|ENST00000610966|SVOP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.3114624023438	2	615.402641	1228.79073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.351	1	54.406	53.906	54.906	0.055614								0	0	0	0.56276	1	4489	4489		26.693	1.1189	1				62957	6155	41860	41876	71386	71386					0.18548576293073893
VLTLNGDVN	9	Unmodified	_VLTLNGDVN_					0	0	0			REV__ENSG00000141434|ENST00000269202|MEP1B	REV__ENSG00000141434|ENST00000269202|MEP1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7557373046875	2	472.756007	943.497461	0.60168	0.00028445	-0.5705	-0.00026971	0.031184	1.4742E-05	472.75559990844266	25.1	0.58479	25.151	24.858	25.443	0.050451					37	20	2	0	0	0	0.67345	1	967	967		42.396	3.1433	1	95939	+		62958	19684	41861	41877	71387	71387					0.023451771722420744
VLTMIQLIQL	10	Unmodified	_VLTMIQLIQL_					0	0	0			REV__ENST00000370513.9_2_1:89206944-89225970:+|nuORF	REV__ENST00000370513.9_2_1:89206944-89225970:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	586.356689453125	2	586.359585	1170.70462	-1.4552	-0.00085327	-3.3756	-0.0019793	-4.8308	-0.0028326	586.3577938983987	73.5	0.88083	73.888	73.615	74.496	0.38779					30	23	2	0	0	0	0.85934	1	8270	8270		35.618	2.8059	1	727300	+		62959	25656	41862	41878	71388	71388					0.1260924839607469
VLTPKPFHTLL	11	Unmodified	_VLTPKPFHTLL_					0	0	0		ENST00000573951.1_1_16:3314653-3314944:+|nuORF	ENST00000573951.1_1_16:3314653-3314944:+|nuORF	ENST00000573951.1_1_16:3314653-3314944:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5924377441406	3	422.592058	1264.75434	-0.50953	-0.00021532	1.9207	0.00081167	1.4112	0.00059634	422.59276833389157	49.547	2.3163	49.454	48.483	50.799	-0.093178					199	59	5	0	0	0	0.76251	1	3772	3772		19.263	1.4295	1	1796900			62960	14028	41863	41879	71389	71389					0.13255699396381715
VLTPSPITWRL	11	Unmodified	_VLTPSPITWRL_					0	0	0		nc|ENSG00000133943|Q7Z3D6-6|DGLUCY	nc|ENSG00000133943|Q7Z3D6-6|DGLUCY	nc|ENSG00000133943|Q7Z3D6-6|DGLUCY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8821411132812	2	641.87953	1281.74451	2.6248	0.0016848	1.9473	0.0012499	4.5721	0.0029347	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.7434	1	11653	11653		23.523	1.5628	1	4455800			62961	14931	41864	41880	71390	71390					0.11490511390979918
VLTRARAS	8	Unmodified	_VLTRARAS_					0	0	0		nc|ENSG00000170325|Q9NQV6-2|PRDM10;nc|ENSG00000170325|Q9NQV6-1|PRDM10;nc|ENSG00000170325|Q9NQV6-5|PRDM10;nc|ENSG00000170325|Q9NQV6|PRDM10;ENSG00000170325|ENST00000360871|PRDM10;nc|ENSG00000170325|Q9NQV6-7|PRDM10;nc|ENSG00000170325|Q9NQV6-6|PRDM10	nc|ENSG00000170325|Q9NQV6-2|PRDM10	nc|ENSG00000170325|Q9NQV6-2|PRDM10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2657470703125	2	437.266876	872.519199	0.044355	1.9395E-05	-2.8438	-0.0012435	-2.7995	-0.0012241	437.26562029129207	23.787	1.9639	23.882	23.206	25.169	0.094501					226	94	5	0	0	0	0.8347	1	760	760		23.042	0	1	2622700			62962	6577	41865	41881	71391	71391					0.0778402671146523
VLTTPLEQ	8	Unmodified	_VLTTPLEQ_					0	0	0			REV__nc|ENSG00000159140|P18583-6|SON	REV__nc|ENSG00000159140|P18583-6|SON	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.75634765625	2	450.755475	899.496398	-1.5537	-0.00070033	-1.298	-0.00058508	-2.8517	-0.0012854	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.87479	1	7827	7827		30.504	0	1	298090	+		62963	20639	41866	41882	71392	71392					0.042629628033296285
VLTVALKIYSF	11	Unmodified	_VLTVALKIYSF_					0	0	0			REV__ENSG00000040531|ENST00000046640|CTNS	REV__ENSG00000040531|ENST00000046640|CTNS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.384765625	2	627.378832	1252.74311	0.9795	0.00061452	4.2538	0.0026687	5.2333	0.0032833	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.69995	1	12398	12398		31.53	2.3598	1	19815000	+		62964	16318	41867	41883	71393	71393					0.12684877302194764
VLTVKPVR	8	Unmodified	_VLTVKPVR_					0	0	0		nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ENSG00000103994|ENST00000564754|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.3051452636719	2	456.30547	910.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.612	1	21.555	21.055	22.055	-0.057203								0	0	0	0.30305	1	609	609		42.396	0	1				62965	2108	41868	41884	71394	71394					0.137512449278006
VLTYVWQI	8	Unmodified	_VLTYVWQI_					0	0	0			REV__ENSG00000221955|ENST00000469902|SLC12A8	REV__ENSG00000221955|ENST00000469902|SLC12A8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	511.28668212890625	2	511.289485	1020.56442	-1.2853	-0.00065715	-4.0206	-0.0020557	-5.3059	-0.0027128	511.2874104215347	41.926	2.0437	41.929	41.503	43.546	0.0034142					109	48	4	0	0	0	0.42407	1	3143	3143		79.451	2.6769	1	7262400	+		62966	23719	41869	41885	71395	71395					0.054958324539938985
VLVALKRA	8	Unmodified	_VLVALKRA_					0	0	0		ENST00000526443.5_1_11:14535901-14541492:-|nuORF;ENST00000528307.5_1_11:14535901-14541893:-|nuORF;ENST00000415494.1_1_X:79965525-79965963:+|nuORF;ENST00000533331.5_1_11:14535061-14541920:-|nuORF;ENSG00000129084|ENST00000396394|PSMA1;nc|ENSG00000129084|P25786-2|PSMA1	ENST00000526443.5_1_11:14535901-14541492:-|nuORF	ENST00000526443.5_1_11:14535901-14541492:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.3000793457031	2	435.300188	868.585822	1.1718	0.00051008	-1.0073	-0.00043847	0.16453	7.1618E-05	435.29961750989986	72.07	5.7316	72.11	70.658	76.39	0.040222					467	233	3	0	0	0	0.86294	1	6957	6957		8.8223	0	1	1921500			62967	3573	41870	41886	71396	71396					0.14627262273347696
VLVCNVKV	8	Unmodified	_VLVCNVKV_					0	0	0		ENST00000500869.6_1_5:89812152-89812287:-|nuORF	ENST00000500869.6_1_5:89812152-89812287:-|nuORF	ENST00000500869.6_1_5:89812152-89812287:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.265625	2	437.264956	872.515359	1.7622	0.00077054	0.050084	2.19E-05	1.8123	0.00079244	437.2649405003658	24.594	1.8935	24.556	23.916	25.81	-0.037176					127	47	4	0	0	0	0.884	1	910	910		33.516	3.0119	1	1079000			62968	12841	41871	41887	71397	71397					0.07400220893396181
VLVEILLALL	10	Unmodified	_VLVEILLALL_					0	0	0		ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	548.3740844726562	2	548.373018	1094.73148	0.27438	0.00015046	2.33	0.0012777	2.6044	0.0014282	548.3741056570226	37.106	1.654	37.206	36.174	37.827	0.099277					123	52	3	0	0	0	0.91594	1	2049	2049		6.7355	3.3255	1	393850			62969	3789	41872	41888	71398	71398					0.18790680278880245
VLVFCSAAWIL	11	Unmodified	_VLVFCSAAWIL_					0	0	0		ENST00000568239.1_16:18890920-18890965:-|nuORF	ENST00000568239.1_16:18890920-18890965:-|nuORF	ENST00000568239.1_16:18890920-18890965:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.89288330078125	3	407.89486	1220.66275	-0.087619	-3.574E-05	-3.9741	-0.001621	-4.0617	-0.0016567	407.8930586182869	80.735	0.90665	81.262	80.864	81.771	0.52676					55	21	4	0	0	0	0.71452	1	9332	9332		25.126	5.0955	1	989370			62970	13959	41873	41889	71399	71399					0.061246927075444546
VLVFDESTE	9	Unmodified	_VLVFDESTE_					0	0	0			REV__ENST00000235790.8_1_1:202776199-202776370:-|nuORF	REV__ENST00000235790.8_1_1:202776199-202776370:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.77685546875	2	519.75313	1037.49171	0.47843	0.00024867	-0.25933	-0.00013479	0.2191	0.00011388	519.7525203921832	37.831	0.18119	38.145	38.055	38.236	0.31312					6	4	2	0	0	0	0.20789	1	3053	3053		15.642	4.1308	1	47182	+		62971	24212	41874	41890	71400	71400					-0.025539661300854277
VLVFYLYLVQG	11	Unmodified	_VLVFYLYLVQG_					0	0	0		ENST00000552045.1_1_12:50589526-50594661:-|nuORF	ENST00000552045.1_1_12:50589526-50594661:-|nuORF	ENST00000552045.1_1_12:50589526-50594661:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.5857238769531	3	438.588313	1312.74311	-1.584	-0.00069474	-4.3443	-0.0019053	-5.9283	-0.0026001	438.5863355487925	32.045	0.80102	32.103	31.818	32.619	0.058319					85	39	3	0	0	0	0.69931	1	1492	1492		31.634	1.0654	1	359140			62972	13676	41875	41891	71401	71401					0.09924877302205459
VLVGAVPEL	9	Unmodified	_VLVGAVPEL_					0	0	0			REV__ENSG00000133135|ENST00000255499|RNF128	REV__ENSG00000133135|ENST00000255499|RNF128	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.7779235839844	2	448.776211	895.537869	-1.4107	-0.00063308	4.4433	0.0019941	3.0326	0.001361	448.7781260236316	72.302	1.1681	72.302	71.823	72.992	0					77	49	2	0	0	0	0.7932	1	6487	6487		26.796	1.3459	1	136900	+		62973	19063	41876	41892	71402	71402					0.08592143562668753
VLVIFRHQ	8	Unmodified	_VLVIFRHQ_					0	0	0		ENST00000409180.1_2_2:86433276-86433387:+|nuORF	ENST00000409180.1_2_2:86433276-86433387:+|nuORF	ENST00000409180.1_2_2:86433276-86433387:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.30877685546875	2	506.308544	1010.60253	-0.4302	-0.00021782	1.5011	0.00076001	1.0709	0.00054219	506.3092413243001	54.85	1.3019	54.801	54.615	55.917	-0.049271					56	42	2	0	0	0	0.86288	1	4540	4540		26.796	2.5934	1	188390			62974	11299	41877	41893	71403	71403					0.0976576315931652
VLVLIFYFIIL	11	Unmodified	_VLVLIFYFIIL_					0	0	0		ENSG00000176294|ENST00000557677|OR4N2	ENSG00000176294|ENST00000557677|OR4N2	ENSG00000176294|ENST00000557677|OR4N2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9599914550781	3	451.624587	1351.85193	-1.8035	-0.00081452	1.4798	0.00066834	-0.32368	-0.00014618	451.6251108617355	45.416	1.0919	45.416	44.809	45.901	0					45	26	2	0	0	0	0.78085	1	3350	3350		15.333	2.3756	1	78079			62975	7071	41878	41894	71404	71404					0.19008088272516943
VLVLVLLVSP	10	Unmodified	_VLVLVLLVSP_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.359619140625	2	526.359911	1050.70527	-1.5421	-0.00081169	4.0218	0.0021169	2.4797	0.0013052	526.3618764637989	37	2.5937	37	36.137	38.73	0					147	61	4	0	0	0	0.85939	1	2254	2254		23.042	5.6775	1	788470			62976	14897	41879	41895	71405	71405					0.18194411107424457
VLVLVLLVSP	10	Unmodified	_VLVLVLLVSP_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.36083984375	2	526.359911	1050.70527	0.054232	2.8545E-05	1.9819	0.0010432	2.0362	0.0010718	526.3608595612541	33.548	1.6551	33.491	33.113	34.768	-0.056385					153	37	5	0	0	0	0.8488	1	2168	2168		17.365	0	1	7840300			62977	14897	41879	41895	71406	71406					0.18194411107424457
VLVLVLLVSP	10	Unmodified	_VLVLVLLVSP_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	526.3603515625	2	526.359911	1050.70527	-0.46682	-0.00024572	2.8843	0.0015182	2.4174	0.0012724	526.3612792747932	37.192	2.9497	37.138	36.203	39.152	-0.053555					173	66	5	0	0	0	0.8488	1	2472	2472		17.365	4.4058	1	2681300			62978	14897	41879	41895	71407	71407					0.18194411107424457
VLVLVLLVSP	10	Unmodified	_VLVLVLLVSP_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3613891601562	2	526.359911	1050.70527	-0.038888	-2.0469E-05	2.1588	0.0011363	2.1199	0.0011158	526.3609380397622	33.42	1.968	33.419	32.786	34.754	-0.0016365					173	45	5	0	0	0	0.86201	2	1925	1925;2074		31.955	6.5047	1	5020100			62979	14897	41879	41895	71408;71409	71408					0.18194411107424457
VLVLVLLVSP	10	Unmodified	_VLVLVLLVSP_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.3609008789062	2	526.359911	1050.70527	-0.2269	-0.00011943	2.7959	0.0014717	2.569	0.0013522	526.3612209605506	35.028	1.7573	35.067	34.528	36.285	0.038643					165	57	4	0	0	0	0.85694	1	1820	1820		21.96	4.5949	1	1497200			62980	14897	41879	41895	71410	71410					0.18194411107424457
VLVLVLLVSP	10	Unmodified	_VLVLVLLVSP_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3602905273438	2	526.359911	1050.70527	0.23622	0.00012434	2.2547	0.0011868	2.4909	0.0013111	526.3609415708197	35.175	1.5308	35.281	34.617	36.148	0.10604					147	55	3	0	0	0	0.8488	4	1884	1798;1853;1864;1884		29.15	5.6775	1	1065400			62981	14897	41879	41895	71411;71412;71413;71414	71414					0.18194411107424457
VLVLVLLVSP	10	Unmodified	_VLVLVLLVSP_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3611450195312	2	526.359911	1050.70527	0.28216	0.00014852	2.2187	0.0011678	2.5009	0.0013164	526.3609172298998	37.04	1.8045	36.98	36.127	37.931	-0.060337					149	55	4	0	0	0	0.85939	1	2109	2109		23.042	0	1	1903200			62982	14897	41879	41895	71415	71415					0.18194411107424457
VLVPALHE	8	Unmodified	_VLVPALHE_					0	0	0			REV__ENSG00000010292|ENST00000315579|NCAPD2	REV__ENSG00000010292|ENST00000315579|NCAPD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.2606201171875	2	439.260728	876.506903	-1.5069	-0.00066191	1.5593	0.00068496	0.052473	2.3049E-05	439.2612986029237	42.093	0.99572	42.791	42.344	43.339	0.69754					56	24	3	0	0	0	0.92176	1	3746	3746		46.766	2.2354	1	2615100	+		62983	16161	41880	41896	71416	71416					0.06370990248410635
VLVPILKPL	9	Unmodified	_VLVPILKPL_					0	0	0			REV__nc|ENSG00000083312|Q92973-3|TNPO1	REV__nc|ENSG00000083312|Q92973-3|TNPO1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	497.2660827636719	2	496.349346	990.684139	-0.41905	-0.00020799	-2.7404	-0.0013602	-3.1595	-0.0015682	496.34794675818256	53.004	1.8659	53.418	52.671	54.537	0.4139					60	44	2	0	0	0	0.20789	1	5346	5346		20.482	1.1219	1	128550	+		62984	16852	41881	41897	71417	71417					0.18842445798554763
VLVPPLKE	8	Unmodified	_VLVPPLKE_					0	0	0			REV__ENSG00000103194|ENST00000219473|USP10	REV__ENSG00000103194|ENST00000219473|USP10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.78765869140625	2	447.786579	893.558604	-1.4062	-0.00062966	4.3321	0.0019399	2.926	0.0013102	447.7883827410388	38.825	1.0154	39.167	38.856	39.872	0.34187					59	23	4	0	0	0	0.86791	1	3200	3200		28.254	1.4582	1	988770	+		62985	17394	41882	41898	71418	71418					0.1075673394233263
VLVPQKLDT	9	Unmodified	_VLVPQKLDT_					0	0	0			REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	REV__nc|ENSG00000125207|Q96J94-3|PIWIL1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.80548095703125	2	506.8055	1011.59645	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.112	1	36.394	35.894	36.894	0.28173								0	0	0	0.30613	1	2812	2812		42.396	1.618	1		+		62986	18629	41883	41899	71419	71419					0.09111200137124342
VLVPRGHR	8	Unmodified	_VLVPRGHR_					0	0	0			REV__ENSG00000010319|ENST00000231721|SEMA3G	REV__ENSG00000010319|ENST00000231721|SEMA3G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2895202636719	2	467.290685	932.566818	0.59956	0.00028017	-0.99923	-0.00046693	-0.39967	-0.00018676	467.29008476451924	33.209	0.96325	33.421	33.102	34.066	0.21168					61	22	4	0	0	0	0.86288	1	2428	2428		26.796	0	1	3366300	+		62987	16164	41884	41900	71420	71420					0.09783725702322954
VLVPSVVSI	9	Unmodified	_VLVPSVVSI_					0	0	0		ENST00000341772.4_1_2:230222395-230222521:-|nuORF	ENST00000341772.4_1_2:230222395-230222521:-|nuORF	ENST00000341772.4_1_2:230222395-230222521:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7894287109375	2	456.791861	911.569169	-1.1174	-0.0005104	2.8657	0.001309	1.7483	0.00079862	456.793043445613	42.454	6.5585	42.415	40.758	47.316	-0.038223					273	160	4	0	0	0	0.7932	1	3039	3039		17.365	0	1	652510			62988	10252	41885	41901	71421	71421					0.10984716596760791
VLVPVSKP	8	Unmodified	_VLVPVSKP_					0	0	0		nc|ENSG00000283703|P0DP72|VSIG10L2;ENSG00000283703|ENST00000686984|VSIG10L2	nc|ENSG00000283703|P0DP72|VSIG10L2	nc|ENSG00000283703|P0DP72|VSIG10L2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	419.77471923828125	2	419.773471	837.53239	-1.192	-0.00050037	4.2982	0.0018043	3.1062	0.0013039	419.7751683244661	42.544	4.3057	42.506	41.614	45.92	-0.038223					235	101	5	0	0	0	0.884	1	3484	3484		33.516	0	1	11423000			62989	9062	41886	41902	71422	71422					0.10712464770847419
VLVQFRPSEY	10	Unmodified	_VLVQFRPSEY_					0	0	0		nc|ENSG00000179397|Q5SY80-3|CATSPERE;nc|ENSG00000179397|Q5SY80-2|CATSPERE;ENSG00000179397|ENST00000366534|CATSPERE;ENST00000473875.5_1_1:244724068-244773670:+|nuORF	nc|ENSG00000179397|Q5SY80-3|CATSPERE	nc|ENSG00000179397|Q5SY80-3|CATSPERE	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.3359375	2	619.332413	1236.65027	-0.71212	-0.00044104	0.88424	0.00054764	0.17212	0.0001066	619.3328577487828	60.41	0.6367	60.41	60.144	60.781	0					65	24	4	0	0	0	0.54701	1	5281	5281		52.937	8.5595	1	426150			62990	7268	41887	41903	71423	71423					0.04141372568847146
VLVQPFTSL	9	Unmodified	_VLVQPFTSL_					0	0	0			REV__ENST00000373095.5_1_9:130704189-130704597:-|nuORF	REV__ENST00000373095.5_1_9:130704189-130704597:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	502.8139953613281	2	502.294768	1002.57498	2.2794	0.0011449	2.8008	0.0014068	5.0802	0.0025517	502.29766766235366	97.049	0.21359	96.993	96.889	97.102	-0.055603					6	4	2	0	0	0	0.20789	1	10438	10438		27.882	16.371	1	39810	+		62991	25746	41888	41904	71424	71424					0.07379815108436105
VLVRFTSNVPY	11	Unmodified	_VLVRFTSNVPY_					0	0	0			REV__ENST00000533812.6_1_11:130716031-130716900:-|nuORF	REV__ENST00000533812.6_1_11:130716031-130716900:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	647.8663330078125	2	647.861338	1293.70812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.87	1	117.79	117.29	118.29	-0.07531								0	0	0	0.56276	1	12649	12649		19.997	4.355	1		+		62992	28358	41889	41905	71425	71425					0.07301634494274367
VLVRIIKG	8	Unmodified	_VLVRIIKG_					0	0	0		ENSG00000169314|ENST00000402217|C22orf15	ENSG00000169314|ENST00000402217|C22orf15	ENSG00000169314|ENST00000402217|C22orf15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	449.3145446777344	2	449.315838	896.617122	0.060144	2.7024E-05	-2.6688	-0.0011991	-2.6086	-0.0011721	449.3144620861982	21.476	1.5551	21.033	20.161	21.716	-0.44324					87	36	3	0	0	0	0.89457	1	793	793		37.028	0	1	594410			62993	6487	41890	41906	71426	71426					0.16467835307469159
VLVRSGRSGPH	11	Unmodified	_VLVRSGRSGPH_					0	0	0			REV__nc|ENSG00000146535|Q03113-2|GNA12	REV__nc|ENSG00000146535|Q03113-2|GNA12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.8323364257812	2	582.833446	1163.65234	-0.40613	-0.0002367	-0.9644	-0.00056209	-1.3705	-0.00079879	582.832911894326	94.456	2.7605	94.456	93.622	96.382	0					111	64	3	0	0	0	0.72106	1	9361	9361		28.081	2.5074	1	367730	+		62994	29917	41891	41907	71427	71427					0.07705846097337599
VLVRTVHRGSK	11	Unmodified	_VLVRTVHRGSK_					0	0	0			REV__nc|nan|Q9H6X5-2|C19orf44	REV__nc|nan|Q9H6X5-2|C19orf44	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.392822265625	2	626.385845	1250.75714	-0.053222	-3.3338E-05	0.92804	0.00058131	0.87481	0.00054797	626.386012542859	108.09	0.33427	108.09	107.96	108.29	0					20	13	2	0	0	0	0.69995	1	11250	11250		31.53	7.0106	1	1764100	+		62995	17503	41892	41908	71428	71428					0.14178967573889167
VLVSDAAEV	9	Unmodified	_VLVSDAAEV_					0	0	0		ENST00000432329.6_1_2:208394661-208394763:+|nuORF	ENST00000432329.6_1_2:208394661-208394763:+|nuORF	ENST00000432329.6_1_2:208394661-208394763:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7453308105469	2	451.745108	901.475663	-0.61831	-0.00027932	2.3255	0.0010506	1.7072	0.00077123	451.7459480558959	34.844	1.0293	34.787	34.355	35.384	-0.056385					46	23	3	0	0	0	0.74721	1	2243	2243		37.159	1.9584	1	301340			62996	11663	41893	41909	71429	71429					0.02098372423665751
VLVSGNWIY	9	Unmodified	_VLVSGNWIY_					0	0	0		ENST00000540915.5_1_12:6797483-6797618:-|nuORF	ENST00000540915.5_1_12:6797483-6797618:-|nuORF	ENST00000540915.5_1_12:6797483-6797618:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	525.7825317382812	2	525.784567	1049.55458	0.11208	5.8929E-05	-4.2574	-0.0022385	-4.1454	-0.0021796	525.7822497255718	49.61	0.55408	49.607	49.358	49.912	-0.0030327					29	12	3	0	0	0	0.69914	1	4162	4162		40.573	0	1	238320			62997	13511	41894	41910	71430	71430					0.03178644448621526
VLVSPTPLA	9	Unmodified	_VLVSPTPLA_					0	0	0		ENSG00000198646|ENST00000359003|NCOA6	ENSG00000198646|ENST00000359003|NCOA6	ENSG00000198646|ENST00000359003|NCOA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.77789306640625	2	448.776211	895.537869	-0.72332	-0.00032461	3.8824	0.0017423	3.1591	0.0014177	448.7778493826416	71.806	1.0797	71.767	71.407	72.487	-0.039009					61	41	2	0	0	0	0.7932	1	7009	7009		23.042	3.6825	1	110710			62998	8300	41895	41911	71431	71431					0.08592143562657384
VLVVTTDAL	9	Unmodified	_VLVVTTDAL_					0	0	0		ENSG00000106546|ENST00000242057|AHR	ENSG00000106546|ENST00000242057|AHR	ENSG00000106546|ENST00000242057|AHR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7776794433594	2	465.778951	929.543348	0.5788	0.00026959	-3.4798	-0.0016208	-2.901	-0.0013512	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.69914	1	7617	7617		40.573	0	1	344270			62999	2301	41896	41912	71432	71432					0.07575822354453976
VLVWGVLP	8	Unmodified	_VLVWGVLP_					0	0	0		ENSG00000140323|ENST00000267889|DISP2	ENSG00000140323|ENST00000267889|DISP2	ENSG00000140323|ENST00000267889|DISP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2656555175781	2	441.776014	881.537475	-0.14405	-6.3639E-05	3.0987	0.001369	2.9547	0.0013053	441.77891322731824	37.547	0.40464	37.86	37.537	37.942	0.31312					13	9	2	0	0	0	0.4196	1	3011	3011		24.504	7.799	1	41513			63000	4425	41897	41913	71433	71433					0.09196768633466945
VLWIRGQGQRT	11	Unmodified	_VLWIRGQGQRT_					0	0	0			REV__nc|nan|Q96HA4-5|C1orf159	REV__nc|nan|Q96HA4-5|C1orf159	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.58575439453125	3	438.586077	1312.7364	-1.997	-0.00087587	1.0676	0.00046821	-0.92947	-0.00040765	438.58651601334884	31.993	0.97123	31.993	31.701	32.672	0					74	39	2	0	0	0	0.72374	1	1611	1611		27.644	0.59661	1	798930	+		63001	27350	41898	41914	71434	71434					0.09254377194224617
VLWRETIL	8	Unmodified	_VLWRETIL_					0	0	0		ENST00000494014.1_1_3:89498448-89499334:+|nuORF	ENST00000494014.1_1_3:89498448-89499334:+|nuORF	ENST00000494014.1_1_3:89498448-89499334:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.30908203125	2	515.30821	1028.60187	-0.31484	-0.00016224	3.304	0.0017026	2.9892	0.0015404	515.3095661907421	60.574	1.8428	61.127	60.542	62.385	0.55323					81	51	3	0	0	0	0.48059	1	6457	6457		76.774	2.5191	1	1900400			63002	12743	41899	41915	71435	71435					0.08870923719609891
VLWVRRER	8	Unmodified	_VLWVRRER_					0	0	0		ENST00000503969.5_1_5:76414257-76443501:+|nuORF	ENST00000503969.5_1_5:76414257-76443501:+|nuORF	ENST00000503969.5_1_5:76414257-76443501:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	557.9605102539062	2	557.335624	1112.6567	0.81035	0.00045164	-0.82852	-0.00046176	-0.018167	-1.0125E-05	557.3351574436635	18.111	0.55844	17.634	17.425	17.983	-0.47694					22	11	3	0	0	0	0.4196	1	354	354		42.474	0	1	229650			63003	12896	41900	41916	71436	71436					0.10487355310897328
VLYAAQAAAET	11	Unmodified	_VLYAAQAAAET_					0	0	0			REV__nc|ENSG00000137076|Q9Y490-2|TLN1;REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	554.2877807617188	2	554.287671	1106.56079	-1.3781	-0.00076384	2.5117	0.0013922	1.1337	0.00062837	554.288925228306	37.897	2.4098	37.897	37.174	39.584	0					151	58	3	0	0	0	0.64498	1	2398	2398		39.253	8.7492	1	328550	+		63004	21784;19357	41901	41917	71437	71437					0.011771178894605328
VLYDRVLKY	9	Unmodified	_VLYDRVLKY_					0	0	0		ENST00000586859.1_1_17:74039843-74041464:-|nuORF;nc|ENSG00000167881|Q9UHB9-3|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;ENSG00000167881|ENST00000307877|SRP68	ENST00000586859.1_1_17:74039843-74041464:-|nuORF	ENST00000586859.1_1_17:74039843-74041464:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.83984375	2	584.839874	1167.66519	-0.75871	-0.00044372	0.49475	0.00028935	-0.26396	-0.00015438	584.8400020562472	51.367	1.0869	51.802	51.285	52.372	0.43505					60	25	4	0	0	0	0.021781	5	5087	5077;5087;5099;5111;5123		124.08	52.784	1	4934100			63005	6336	41902	41918	71438;71439;71440;71441;71442	71439					0.08806864436837714
VLYDRVLKY	9	Unmodified	_VLYDRVLKY_					0	0	0		ENST00000586859.1_1_17:74039843-74041464:-|nuORF;nc|ENSG00000167881|Q9UHB9-3|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;ENSG00000167881|ENST00000307877|SRP68	ENST00000586859.1_1_17:74039843-74041464:-|nuORF	ENST00000586859.1_1_17:74039843-74041464:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.8404541015625	2	584.839874	1167.66519	0.57137	0.00033416	-0.86332	-0.00050491	-0.29195	-0.00017075	584.8392777686282	51.161	0.94748	51.913	51.572	52.52	0.75174					56	22	4	0	0	0	0.039957	4	5078	5068;5078;5089;5102		112.41	45.982	1	4791400			63006	6336	41902	41918	71443;71444;71445;71446	71444					0.08806864436837714
VLYKYRCY	8	Unmodified	_VLYKYRCY_					0	0	0		nc|ENSG00000288674|P49810-2|PSEN2;nc|ENSG00000288674|P49810-3|PSEN2;ENSG00000143801|ENST00000366783|PSEN2;nc|ENSG00000080815|P49768-6|PSEN1;nc|ENSG00000080815|P49768-7|PSEN1;nc|ENSG00000080815|P49768-2|PSEN1;ENSG00000080815|ENST00000324501|PSEN1;nc|ENSG00000080815|P49768-4|PSEN1;nc|ENSG00000080815|P49768-3|PSEN1;nc|ENSG00000080815|P49768-5|PSEN1	nc|ENSG00000288674|P49810-2|PSEN2	nc|ENSG00000288674|P49810-2|PSEN2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8031005859375	2	554.28642	1106.55829	-0.26931	-0.00014927	2.2703	0.0012584	2.001	0.0011091	554.2878375137508	68.131	0.58316	68.679	68.409	68.993	0.54819					26	13	3	0	0	0	0.4196	1	7476	7476		35.201	6.0512	1	174120			63007	4663	41903	41919	71447	71447					0.00926990950824802
VLYTSLFMTF	10	Unmodified	_VLYTSLFMTF_					0	0	0			REV__ENSG00000094661|ENST00000641398|OR1I1	REV__ENSG00000094661|ENST00000641398|OR1I1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3143920898438	2	611.314843	1220.61513	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.63	1	110.61	110.11	111.11	-0.026932								0	0	0	0.45132	1	12241	12241		29.15	0.89528	1		+		63008	17044	41904	41920	71448	71448					0.013649937166746895
VLYVGLLV	8	Unmodified	_VLYVGLLV_					0	0	0			REV__ENSG00000166368|ENST00000299459|OR2D2	REV__ENSG00000166368|ENST00000299459|OR2D2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.26153564453125	2	438.283672	874.552791	-0.11504	-5.0422E-05	3.3779	0.0014805	3.2628	0.00143	438.28434789349575	40.269	0.22078	40.221	40.082	40.303	-0.04789					9	6	2	0	0	0	0.4196	1	2518	2518		16.705	6.5202	1	78775	+		63009	21285	41905	41921	71449	71449					0.1104963543066333
VMACCWAL	8	Unmodified	_VMACCWAL_					0	0	0		nc|ENSG00000163785|P34925-2|RYK;ENSG00000163785|ENST00000623711|RYK	nc|ENSG00000163785|P34925-2|RYK	nc|ENSG00000163785|P34925-2|RYK	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.2606201171875	2	448.694995	895.375437	-0.12831	-5.7574E-05	-4.397	-0.0019729	-4.5253	-0.0020305	448.69500768852	68.423	0.12575	68.97	68.866	68.991	0.54693					4	2	2	0	0	0	0.4196	1	7540	7540		10.185	0	1	13241			63010	5862	41906	41922	71450	71450					-0.07643602707003083
VMAPRTLLL	9	Oxidation (M)	_VM(Oxidation (M))APRTLLL_		VM(1)APRTLLL		VM(85)APRTLLL	0	0	1		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.309814453125	2	515.309895	1028.60524	-0.66357	-0.00034194	0.24044	0.0001239	-0.42313	-0.00021804	515.3099504894494	58.588	1.2483	58.98	58.194	59.443	0.39209					90	29	4	0	0	0	0.14236	5	6168	6132;6144;6156;6168;6180		85.161	21.855	1	3770900			63011	8557;12060	41907	41923	71451;71452;71453;71454;71455	71454		150			0.0920785050197992
VMAPRTLLL	9	Oxidation (M)	_VM(Oxidation (M))APRTLLL_		VM(1)APRTLLL		VM(46)APRTLLL	0	0	1		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3102416992188	2	515.309895	1028.60524	-0.55946	-0.0002883	0.60137	0.00030989	0.041903	2.1593E-05	515.3100019000319	59.336	1.1389	59.727	59.399	60.538	0.39077					69	28	3	0	0	0	0.6204	1	6247	6247		45.972	8.9438	1	1213100			63012	8557;12060	41907	41923	71456	71456		150			0.0920785050197992
VMAPRTLLL	9	Oxidation (M)	_VM(Oxidation (M))APRTLLL_		VM(1)APRTLLL		VM(53)APRTLLL	0	0	1		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3101196289062	2	515.309895	1028.60524	-0.51651	-0.00026616	-0.139	-7.1626E-05	-0.65551	-0.00033779	515.3096745064526	60.704	1.8309	61.094	60.444	62.275	0.38945					81	51	3	0	0	0	0.48102	2	6481	6457;6481		52.937	10.415	1	1902500			63013	8557;12060	41907	41923	71457;71458	71458		150			0.0920785050197992
VMAPRTLLL	9	Oxidation (M)	_VM(Oxidation (M))APRTLLL_		VM(1)APRTLLL		VM(70)APRTLLL	0	0	1		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.3098754882812	2	515.309895	1028.60524	0.70917	0.00036544	-0.64391	-0.00033181	0.065261	3.363E-05	515.3093455748867	57.303	1.0752	57.858	57.355	58.43	0.55513					83	26	4	0	0	0	0.24527	3	5954	5954;5990;6004		69.628	12.907	1	3327500			63014	8557;12060	41907	41923	71459;71460;71461	71459		150			0.0920785050197992
VMAPRTLLL	9	Oxidation (M)	_VM(Oxidation (M))APRTLLL_		VM(1)APRTLLL		VM(85)APRTLLL	0	0	1		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.31005859375	2	515.309895	1028.60524	0.22793	0.00011746	-0.49424	-0.00025468	-0.2663	-0.00013723	515.3094745743989	58.428	1.0687	58.981	58.387	59.456	0.55323					69	25	3	0	0	0	0.14236	6	6112	6112;6124;6136;6148;6161;6174		85.161	19.695	1	3949400			63015	8557;12060	41907	41923	71462;71463;71464;71465;71466;71467	71462		150			0.0920785050197992
VMAPRTLLL	9	Oxidation (M)	_VM(Oxidation (M))APRTLLL_		VM(1)APRTLLL		VM(70)APRTLLL	0	0	1		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	515.310302734375	2	515.309895	1028.60524	-0.31026	-0.00015988	0.17651	9.0958E-05	-0.13375	-6.8924E-05	515.309789573958	59.477	1.1647	60.03	59.456	60.621	0.55323					75	29	3	0	0	0	0.24527	1	6304	6304		69.628	9.5094	1	1098000			63016	8557;12060	41907	41923	71468	71468		150			0.0920785050197992
VMAPRTLLL	9	Unmodified	_VMAPRTLLL_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.31231689453125	2	507.312438	1012.61032	-0.84598	-0.00042918	0.76841	0.00038982	-0.077572	-3.9353E-05	507.3126659321578	61.664	1.1042	62.052	61.561	62.665	0.38845					78	25	4	0	0	0	0.11055	6	6579	6545;6555;6567;6579;6591;6603		90.37	27.064	1	1934900			63017	8557;12060	41907	41924	71469;71470;71471;71472;71473;71474	71472					0.10452154364600119
VMAPRTLLL	9	Unmodified	_VMAPRTLLL_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.31207275390625	2	507.312438	1012.61032	-0.697	-0.0003536	0.45992	0.00023333	-0.23708	-0.00012027	507.31252828553215	63.172	2.1467	63.559	62.968	65.115	0.38779					115	49	4	0	0	0	0.065196	7	6782	6760;6770;6782;6794;6806;6818;6845		101.6	35.171	1	2688300			63018	8557;12060	41907	41924	71475;71476;71477;71478;71479;71480;71481	71477					0.10452154364600119
VMAPRTLLL	9	Unmodified	_VMAPRTLLL_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3123779296875	2	507.312438	1012.61032	0.6361	0.0003227	-0.86824	-0.00044047	-0.23214	-0.00011777	507.3117898295914	61.506	1.0937	62.06	61.596	62.689	0.55386					78	26	4	0	0	0	0.057432	7	6584	6542;6553;6564;6573;6584;6596;6609		104.75	27.9	1	2300400			63019	8557;12060	41907	41924	71482;71483;71484;71485;71486;71487;71488	71486					0.10452154364600119
VMAPRTLLL	9	Unmodified	_VMAPRTLLL_					0	0	0		ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000463348.5_1_6:30227401-30227711:+|nuORF	ENST00000496081.5_1_6:29910330-29912419:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3117980957031	2	507.312438	1012.61032	1.0259	0.00052047	-1.3042	-0.00066165	-0.2783	-0.00014118	507.31162994736894	63.037	2.7485	63.591	62.907	65.655	0.55449					132	65	4	0	0	0	0.051853	9	6782	6761;6770;6782;6794;6806;6816;6828;6840;6854		107.01	38.221	1	3121800			63020	8557;12060	41907	41924	71489;71490;71491;71492;71493;71494;71495;71496;71497	71491					0.10452154364600119
VMAPVGPPRSE	11	Unmodified	_VMAPVGPPRSE_					0	0	0		nc|ENSG00000197555|O43166-3|SIPA1L1;ENSG00000197555|ENST00000381232|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.2943725585938	2	570.297516	1138.58048	0.12101	6.9013E-05	-3.5904	-0.0020476	-3.4694	-0.0019786	570.2953055763262	62.015	0.69638	61.982	61.637	62.333	-0.033173					55	25	3	0	0	0	0.53495	1	5892	5892		49.442	3.4693	1	814620			63021	8174	41908	41925	71498	71498					0.016731706286009285
VMASLLQDQL	10	Unmodified	_VMASLLQDQL_					0	0	0		ENST00000483685.5_1_2:219472784-219496902:+|nuORF;ENST00000469493.5_1_2:219472784-219492999:+|nuORF	ENST00000483685.5_1_2:219472784-219496902:+|nuORF	ENST00000483685.5_1_2:219472784-219496902:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.2976684570312	2	559.299724	1116.5849	-0.42129	-0.00023563	-1.7959	-0.0010045	-2.2172	-0.0012401	559.2985614769491	59.28	1.3239	59.67	59.399	60.723	0.39077					41	32	2	0	0	0	0.2575	1	6231	6231		77.318	2.2743	1	451590			63022	12201	41909	41926	71499	71499					0.03126635051512494
VMCHAARLL	9	Unmodified	_VMCHAARLL_					0	0	0			REV__ENST00000370651.5_1_6:64282437-64282590:+|nuORF	REV__ENST00000370651.5_1_6:64282437-64282590:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.75323486328125	2	507.27279	1012.53103	-0.81002	-0.0004109	4.0649	0.002062	3.2548	0.0016511	507.27482332902485	62.847	0.47694	63.234	62.925	63.402	0.38779					13	10	2	0	0	0	0.20789	1	6736	6736		57.811	6.4758	1	36099	+		63023	25660	41910	41927	71500	71500					0.025261841387873574
VMDLLIDVK	9	Unmodified	_VMDLLIDVK_					0	0	0			REV__ENST00000492537.5_1_22:39052727-39067259:+|nuORF	REV__ENST00000492537.5_1_22:39052727-39067259:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3035278320312	2	523.301736	1044.58892	1.2403	0.00064907	2.4762	0.0012958	3.7166	0.0019449	523.302929168532	91.415	2.5669	91.46	91.141	93.708	0.045448					111	60	2	0	0	0	0.74721	1	9511	9511		37.159	0	1	1018700	+		63024	27675	41911	41928	71501	71501					0.06840724545213561
VMDRLAQV	8	Unmodified	_VMDRLAQV_					0	0	0			REV__ENSG00000124120|ENST00000262605|TTPAL	REV__ENSG00000124120|ENST00000262605|TTPAL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.2542419433594	2	466.25512	930.495686	-0.11935	-5.5648E-05	-2.4846	-0.0011585	-2.604	-0.0012141	466.25388962945533	65.711	0.99811	65.722	64.753	65.751	0.010445					55	40	2	0	0	0	0.87479	1	6165	6165		30.504	1.3541	1	367120	+		63025	18558	41912	41929	71502	71502					0.027658448826400672
VMDSKIVQV	9	Unmodified	_VMDSKIVQV_					0	0	0		ENSG00000025800|ENST00000373625|KPNA6;ENSG00000114030|ENST00000344337|KPNA1;ENSG00000196911|ENST00000368564|KPNA5	ENSG00000025800|ENST00000373625|KPNA6	ENSG00000025800|ENST00000373625|KPNA6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.76177978515625	2	509.78371	1017.55287	-0.84071	-0.00042858	0.34915	0.00017799	-0.49156	-0.00025059	509.78350099480576	47.873	0.58638	48.343	48.082	48.668	0.46941					34	14	4	0	0	0	0.20789	1	4581	4581		42.864	24.54	1	460320			63026	868	41913	41930	71503	71503					0.044792673683673456
VMDSKIVQV	9	Unmodified	_VMDSKIVQV_					0	0	0		ENSG00000025800|ENST00000373625|KPNA6;ENSG00000114030|ENST00000344337|KPNA1;ENSG00000196911|ENST00000368564|KPNA5	ENSG00000025800|ENST00000373625|KPNA6	ENSG00000025800|ENST00000373625|KPNA6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.76251220703125	2	509.78371	1017.55287	-0.085776	-4.3727E-05	-0.86948	-0.00044325	-0.95526	-0.00048698	509.7830117041787	47.653	0.58679	48.576	48.317	48.904	0.92315					22	14	2	0	0	0	0.20789	1	4576	4576		75.043	8.614	1	615200			63027	868	41913	41930	71504	71504					0.044792673683673456
VMETVPVLKAQ	11	Unmodified	_VMETVPVLKAQ_					0	0	0		nc|ENSG00000269335|Q9Y6K9-2|IKBKG;ENSG00000269335|ENST00000594239|IKBKG	nc|ENSG00000269335|Q9Y6K9-2|IKBKG	nc|ENSG00000269335|Q9Y6K9-2|IKBKG	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5643615722656	3	405.565291	1213.67404	-1.5858	-0.00064316	0.14306	5.8019E-05	-1.4428	-0.00058514	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.71803	1	5280	5280		28.577	6.891	1	181560			63028	15310	41914	41931	71505	71505					0.0757547001101102
VMEVLKKHLK	10	Unmodified	_VMEVLKKHLK_					0	0	0		ENSG00000173757|ENST00000293328|STAT5B;ENST00000468496.5_1_17:40362419-40369297:-|nuORF	ENSG00000173757|ENST00000293328|STAT5B	ENSG00000173757|ENST00000293328|STAT5B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	408.9221496582031	3	408.921409	1223.7424	-0.96203	-0.00039339	3.0371	0.0012419	2.075	0.00084852	408.92267652699474	104.87	3.639	104.87	103.29	106.93	0					182	86	5	0	0	0	0.86763	1	10811	10811		19.263	3.2559	1	1119800			63029	6883	41915	41932	71506	71506					0.13947759381517244
VMEVLKKHLK	10	Unmodified	_VMEVLKKHLK_					0	0	0		ENSG00000173757|ENST00000293328|STAT5B;ENST00000468496.5_1_17:40362419-40369297:-|nuORF	ENSG00000173757|ENST00000293328|STAT5B	ENSG00000173757|ENST00000293328|STAT5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8790893554688	2	612.878476	1223.7424	0.91302	0.00055957	0.73286	0.00044915	1.6459	0.0010087	612.8787003590065	104.47	3.5452	104.58	103.94	107.49	0.11684					293	87	6	0	0	0	0.8608	1	11068	11068		34.173	5.0025	1	81912000			63030	6883	41915	41932	71507	71507					0.13947759381517244
VMEYASRGDL	10	Unmodified	_VMEYASRGDL_					0	0	0		ENSG00000163545|ENST00000367157|NUAK2	ENSG00000163545|ENST00000367157|NUAK2	ENSG00000163545|ENST00000367157|NUAK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	571.273681640625	2	570.771331	1139.52811	-1.1215	-0.00064012	0.73129	0.0004174	-0.39021	-0.00022272	571.2731771324486	59.343	1.7285	59.329	58.466	60.195	-0.013733					93	51	2	0	0	0	0.80179	1	5408	5408		39.253	0	1	112100			63031	5823	41916	41933	71508	71508					-0.036074125050163275
VMFRPLAF	8	Unmodified	_VMFRPLAF_					0	0	0			REV__ENST00000267984.3_1_15:81294113-81294617:+|nuORF	REV__ENST00000267984.3_1_15:81294113-81294617:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.2980651855469	2	490.772948	979.531344	-0.63451	-0.0003114	1.8468	0.00090638	1.2123	0.00059498	490.7738224312537	110.61	0.48892	110.72	110.5	110.99	0.11659					27	18	2	0	0	0	0.4196	1	11920	11920		9.4706	0	1	78533	+		63032	24508	41917	41934	71509	71509					0.040759271302931666
VMGVVPLKG	9	Unmodified	_VMGVVPLKG_					0	0	0		nc|ENSG00000159363|Q9NQ11-3|ATP13A2;ENSG00000159363|ENST00000326735|ATP13A2;nc|ENSG00000159363|Q9NQ11-2|ATP13A2	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2738952636719	2	450.272781	898.531009	0.91195	0.00041063	3.6222	0.001631	4.5342	0.0020416	450.2741920951115	83.25	0.68932	83.309	82.984	83.673	0.05925					37	15	4	0	0	0	0.72402	1	8360	8360		38.806	10.552	1	240020			63033	5527	41918	41935	71510	71510					0.07768507410446546
VMIKLLQSIIW	11	Unmodified	_VMIKLLQSIIW_					0	0	0		ENST00000517608.5_1_8:74705439-74705553:-|nuORF	ENST00000517608.5_1_8:74705439-74705553:-|nuORF	ENST00000517608.5_1_8:74705439-74705553:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6082458496094	3	448.608831	1342.80467	-1.3368	-0.0005997	2.5374	0.0011383	1.2006	0.00053859	448.60975879741926	77.285	1.2875	77.285	77.023	78.311	0					128	61	3	0	0	0	0.78683	1	7094	7094		14.086	0	1	598490			63034	13100	41919	41936	71511	71511					0.146974857298801
VMIMEVADL	9	Unmodified	_VMIMEVADL_					0	0	0			REV__ENST00000297591.9_1_8:95508671-95511612:-|nuORF	REV__ENST00000297591.9_1_8:95508671-95511612:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.7563171386719	2	510.758846	1019.50314	-0.74948	-0.0003828	-2.2472	-0.0011478	-2.9967	-0.0015306	510.75766359448636	73.053	0.67789	73.44	73.084	73.762	0.38779					30	15	3	0	0	0	0.39977	1	8177	8177		57.811	2.3071	1	831590	+		63035	24726	41920	41937	71512	71512					-0.0058318363195439815
VMKEEHKPQQ	10	Unmodified	_VMKEEHKPQQ_					0	0	0		nc|ENSG00000058056|Q92995-2|USP13;ENSG00000058056|ENST00000263966|USP13	nc|ENSG00000058056|Q92995-2|USP13	nc|ENSG00000058056|Q92995-2|USP13	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	627.3187255859375	2	627.31898	1252.62341	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.774	1	61.893	61.393	62.393	0.11901								0	0	0	0.45132	1	5375	5375		36.447	2.2742	1				63036	1041	41921	41938	71513	71513					0.007199406860081581
VMKGFLDFI	9	Unmodified	_VMKGFLDFI_					0	0	0		ENSG00000165923|ENST00000525123|AGBL2;ENST00000529712.5_1_11:47690447-47736202:-|nuORF	ENSG00000165923|ENST00000525123|AGBL2	ENSG00000165923|ENST00000525123|AGBL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2922973632812	2	535.291171	1068.56779	-0.21106	-0.00011298	2.8739	0.0015384	2.6629	0.0014254	535.2926273874909	82.637	0.70296	83.111	82.753	83.456	0.47383					39	16	3	0	0	0	0.47272	1	9595	9595		53.351	10.955	1	748540			63037	6138	41922	41939	71514	71514					0.036247592363451986
VMKNGGRI	8	Unmodified	_VMKNGGRI_					0	0	0			REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	REV__ENST00000423695.6_1_5:10250480-10261980:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713623046875	2	437.750005	873.485456	-0.62078	-0.00027175	0.26821	0.00011741	-0.35257	-0.00015434	437.7501162974214	38.707	0.84007	39.229	38.83	39.67	0.52235					40	19	4	0	0	0	0.4196	1	3194	3194		8.2313	0	1	316600	+		63038	26512	41923	41940	71515	71515					0.04365281948059874
VMLAGRGL	8	Unmodified	_VMLAGRGL_					0	0	0		ENSG00000174165|ENST00000310442|ZDHHC24	ENSG00000174165|ENST00000310442|ZDHHC24	ENSG00000174165|ENST00000310442|ZDHHC24	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.7394714355469	2	408.741648	815.468743	-1.0833	-0.00044277	-3.5311	-0.0014433	-4.6144	-0.0018861	408.74010288341543	37.409	2.2746	37.356	36.961	39.236	-0.053558					112	51	3	0	0	0	0.92176	1	2562	2562		46.766	0	1	289290			63039	6912	41924	41941	71516	71516					0.05362781062092381
VMLLVSLLM	9	Unmodified	_VMLLVSLLM_					0	0	0			REV__ENSG00000125895|ENST00000429036|TMEM74B	REV__ENSG00000125895|ENST00000429036|TMEM74B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.80377197265625	2	509.805599	1017.59665	-0.054339	-2.7702E-05	-3.6302	-0.0018507	-3.6846	-0.0018784	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.7932	1	8573	8573		25.45	3.4903	1	2906900	+		63040	18679	41925	41942	71517	71517					0.08855160541133955
VMLLVSLLM	9	Unmodified	_VMLLVSLLM_					0	0	0			REV__ENSG00000125895|ENST00000429036|TMEM74B	REV__ENSG00000125895|ENST00000429036|TMEM74B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	509.8063659667969	2	509.805599	1017.59665	-1.541	-0.00078559	-2.1488	-0.0010955	-3.6897	-0.0018811	509.8044132943689	86.339	5.2018	86.503	85.422	90.624	0.16473					348	121	4	0	0	0	0.7932	1	8333	8333		25.45	3.4903	1	2989000	+		63041	18679	41925	41942	71518	71518					0.08855160541133955
VMLPKKSK	8	Unmodified	_VMLPKKSK_					0	0	0			REV__ENSG00000173467|ENST00000310398|AGR3	REV__ENSG00000173467|ENST00000310398|AGR3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.2525939941406	2	465.793881	929.573209	-0.072547	-3.3792E-05	4.0574	0.0018899	3.9849	0.0018561	465.795655412802	62.9	0.14899	62.866	62.759	62.908	-0.03371					7	5	2	0	0	0	0.4196	1	5950	5950		18.324	0.95945	1	50293	+		63042	21926	41926	41943	71519	71519					0.10560482818823402
VMLPRVPE	8	Unmodified	_VMLPRVPE_					0	0	0		ENSG00000066813|ENST00000329697|ACSM2B	ENSG00000066813|ENST00000329697|ACSM2B	ENSG00000066813|ENST00000329697|ACSM2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.76898193359375	2	470.767863	939.521173	0.3438	0.00016185	1.592	0.00074944	1.9357	0.00091129	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.89043	1	4438	4438		35.618	2.1027	1	1863100			63043	1167	41927	41944	71520	71520					0.048993194050581224
VMNNRLALD	9	Unmodified	_VMNNRLALD_					0	0	0		ENSG00000269526|ENST00000602168|ERVV-1	ENSG00000269526|ENST00000602168|ERVV-1	ENSG00000269526|ENST00000602168|ERVV-1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.2733154296875	2	523.276583	1044.53861	-0.34029	-0.00017806	-4.1405	-0.0021666	-4.4808	-0.0023447	523.2740472886295	60.549	1.1067	60.938	60.253	61.36	0.38945					48	30	3	0	0	0	0.76764	1	6397	6397		34.173	1.3601	1	691090			63044	8971	41928	41945	71521	71521					0.018126149400586655
VMNNRLALD	9	Unmodified	_VMNNRLALD_					0	0	0		ENSG00000269526|ENST00000602168|ERVV-1	ENSG00000269526|ENST00000602168|ERVV-1	ENSG00000269526|ENST00000602168|ERVV-1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	523.276583	1044.53861	-0.38632	-0.00020215	-4.3609	-0.002282	-4.7472	-0.0024841	523.2740276570667	60.433	0.73846	60.986	60.621	61.359	0.55323	0.023999	-0.00013979	NaN	34.173	33	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	782360			63045	8971	41928	41945							0.018126149400586655
VMPASWLAR	9	Unmodified	_VMPASWLAR_					0	0	0			REV__AluJo_dup50387|chr12:53460146-53460445:-|1.288601933345857|0.0025522745462867|8.98|62.0|1|1|sense	REV__AluJo_dup50387|chr12:53460146-53460445:-|1.288601933345857|0.0025522745462867|8.98|62.0|1|1|sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.4561767578125	2	515.778762	1029.54297	0.86832	0.00044786	1.724	0.00088922	2.5924	0.0013371	515.7796104083629	35.978	0.88218	36.235	35.942	36.824	0.25726					36	21	2	0	0	0	0.20789	1	2841	2841		34.173	0	1	1581000	+		63046	15381	41929	41946	71522	71522					0.02938124153638455
VMPISVRPK	9	Unmodified	_VMPISVRPK_					0	0	0			REV__nc|ENSG00000161649|Q6UXG3-3|CD300LG	REV__nc|ENSG00000161649|Q6UXG3-3|CD300LG	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8088989257812	2	513.810062	1025.60557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.792	1	46.687	46.187	47.187	0.89542								0	0	0	0.30053	1	4293	4293		30.504	2.6214	1		+		63047	20773	41930	41947	71523	71523					0.09379270221802471
VMPPIHPL	8	Unmodified	_VMPPIHPL_					0	0	0			REV__ENST00000530546.5_1_11:77911190-77917082:+|nuORF	REV__ENST00000530546.5_1_11:77911190-77917082:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	451.74603271484375	2	452.259674	902.504795	-0.15962	-7.2188E-05	3.1332	0.001417	2.9735	0.0013448	452.26070851844077	34.43	0.36885	34.64	34.359	34.728	0.21003					11	8	2	0	0	0	0.4196	1	2517	2517		16.705	0	1	77044	+		63048	18305	41931	41948	71524	71524					0.04964238238960661
VMPPIHPL	8	Unmodified	_VMPPIHPL_					0	0	0			REV__ENST00000530546.5_1_11:77911190-77917082:+|nuORF	REV__ENST00000530546.5_1_11:77911190-77917082:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	452.259674	902.504795	1.2032	0.00054417	2.531	0.0011447	3.7342	0.0016888	452.2602986229827	34.349	0.4115	34.654	34.447	34.858	0.30494	0.0072173	-0.00026558	NaN	24.504	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106660	+		63049	18305	41931	41948							0.04964238238960661
VMPRGSGT	8	Unmodified	_VMPRGSGT_					0	0	0		ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2;chr20:21367274-21368463|18|10.11|0.45|4.48|+|1|None,XRN2|1	ENSG00000088930|ENST00000377191|XRN2	ENSG00000088930|ENST00000377191|XRN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.70330810546875	2	402.705263	803.395972	0.54215	0.00021833	-4.1231	-0.0016604	-3.5809	-0.0014421	402.70350422804876	24.881	0.53984	24.931	24.573	25.113	0.050453					18	15	2	0	0	0	0.84341	1	958	958		24.203	2.2429	1	22514			63050	1600	41932	41949	71525	71525					-0.013589727313046751
VMPRTALKP	9	Unmodified	_VMPRTALKP_					0	0	0		ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.79931640625	2	506.802237	1011.58992	-1.5362	-0.00077856	-1.1726	-0.0005943	-2.7089	-0.0013729	506.8015777288388	44.442	2.8102	44.442	42.605	45.415	0					120	68	3	0	0	0	0.77696	1	3299	3299		31.53	0	1	386210			63051	13810	41933	41950	71526	71526					0.08458983704758793
VMPRTALKP	9	Unmodified	_VMPRTALKP_					0	0	0		ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.8011779785156	2	506.802237	1011.58992	-0.65007	-0.00032946	-1.713	-0.00086818	-2.3631	-0.0011976	506.8012923744614	46.783	1.6998	46.754	45.886	47.586	-0.028782					74	44	2	0	0	0	0.7932	1	3768	3768		26.693	2.4902	1	223510			63052	13810	41933	41950	71527	71527					0.08458983704758793
VMPRTALKP	9	Unmodified	_VMPRTALKP_					0	0	0		ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8003845214844	2	506.802237	1011.58992	-1.1816	-0.00059884	-1.852	-0.00093859	-3.0336	-0.0015374	506.8012726682809	44.534	3.0875	44.53	42.489	45.577	-0.0041618					139	73	2	0	0	0	0.77696	1	3525	3525		31.53	1.0262	1	459990			63053	13810	41933	41950	71528	71528					0.08458983704758793
VMPRTALKP	9	Unmodified	_VMPRTALKP_					0	0	0		ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8001708984375	2	506.802237	1011.58992	-0.74642	-0.00037829	-1.7572	-0.00089057	-2.5037	-0.0012689	506.80136960171825	46.955	2.0876	46.95	45.534	47.621	-0.0041618					97	53	2	0	0	0	0.78058	1	3768	3768		30.504	1.3541	1	258120			63054	13810	41933	41950	71529	71529					0.08458983704758793
VMPRTALKP	9	Unmodified	_VMPRTALKP_					0	0	0		ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.80096435546875	2	506.802237	1011.58992	-0.048814	-2.4739E-05	-2.3669	-0.0011995	-2.4157	-0.0012243	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.7932	1	3151	3151		26.693	2.4902	1	475290			63055	13810	41933	41950	71530	71530					0.08458983704758793
VMPRTALKP	9	Unmodified	_VMPRTALKP_					0	0	0		ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	ENST00000559668.5_1_15:84870350-84870740:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.8024597167969	2	506.802237	1011.58992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.635	1	53.572	53.072	54.072	-0.062065								0	0	0	0.32159	1	4397	4397		23.042	0	1				63056	13810	41933	41950	71531	71531					0.08458983704758793
VMPTGTMGQI	10	Unmodified	_VMPTGTMGQI_					0	0	0			REV__ENSG00000016082|ENST00000230658|ISL1	REV__ENSG00000016082|ENST00000230658|ISL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.7545166015625	2	517.754095	1033.49364	-0.43157	-0.00022345	-0.63733	-0.00032998	-1.0689	-0.00055343	517.7535867827911	61	1.1143	61.39	60.753	61.867	0.38945					51	33	2	0	0	0	0.28217	1	6477	6477		74.255	10.048	1	958090	+		63057	16213	41934	41951	71532	71532					-0.021769519174767993
VMPVLHTQ	8	Unmodified	_VMPVLHTQ_					0	0	0			REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	462.2521667480469	2	462.752213	923.489873	-0.2387	-0.00011046	-3.451	-0.001597	-3.6897	-0.0017074	462.75043297512474	47.383	0.53021	47.379	47.092	47.622	-0.0035286					22	15	2	0	0	0	0.4196	1	3886	3886		26.796	0	1	194250	+		63058	30005	41935	41952	71533	71533					0.02506746370977453
VMRDPASK	8	Unmodified	_VMRDPASK_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2396240234375	2	452.23947	902.464386	-0.38468	-0.00017397	0.79739	0.00036061	0.41271	0.00018664	452.23969293569223	25.238	1.266	24.91	24.476	25.742	-0.32825					51	28	3	0	0	0	0.77771	1	1284	1284		64.207	11.271	1	474500			63059	3232	41936	41953	71534	71534					0.009252718485413425
VMRDPASK	8	Unmodified	_VMRDPASK_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.23974609375	2	452.23947	902.464386	2.4335	0.0011005	-2.2694	-0.0010263	0.16414	7.423E-05	452.23834794535566	25.317	1.1666	24.886	24.272	25.439	-0.4311					55	26	3	0	0	0	0.36517	1	1297	1297		82.241	8.2658	1	516220			63060	3232	41936	41953	71535	71535					0.009252718485413425
VMRKQILCIY	10	Unmodified	_VMRKQILCIY_					0	0	0		ENST00000520235.1_1_8:69103966-69132518:+|nuORF	ENST00000520235.1_1_8:69103966-69132518:+|nuORF	ENST00000520235.1_1_8:69103966-69132518:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	423.3069763183594	3	422.906883	1265.69882	0.22359	9.4557E-05	1.0559	0.00044654	1.2795	0.0005411	422.90668807279997	20.013	0.36802	19.383	19.122	19.49	-0.62961					12	7	3	0	0	0	0.37624	1	575	575		12.812	0	1	32949			63061	13157	41937	41954	71536	71536					0.0765982661275757
VMRKRAKSQHL	11	Unmodified	_VMRKRAKSQHL_					0	0	0			REV__ENST00000209728.8_1_17:38447312-38447438:+|nuORF	REV__ENST00000209728.8_1_17:38447312-38447438:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9322509765625	3	451.934712	1352.78231	-0.99129	-0.000448	-3.5048	-0.0015839	-4.4961	-0.0020319	451.9330862164875	100.92	2.2384	100.92	100.04	102.28	0					149	53	4	0	0	0	0.68431	1	10285	10285		34.087	7.3368	1	534780	+		63062	24109	41938	41955	71537	71537					0.1200269910480074
VMRKVSRNKV	10	Unmodified	_VMRKVSRNKV_					0	0	0			REV__ENST00000565598.2_1_16:53404936-53406966:-|nuORF	REV__ENST00000565598.2_1_16:53404936-53406966:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2481384277344	3	406.248408	1215.72339	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.65	1	117.62	117.12	118.12	-0.02433								0	0	0	0.45132	1	13026	13026		17.468	0.75062	1		+		63063	28857	41939	41956	71538	71538					0.1241622281047512
VMRPGGLN	8	Unmodified	_VMRPGGLN_					0	0	0			REV__ENSG00000179142|ENST00000323110|CYP11B2	REV__ENSG00000179142|ENST00000323110|CYP11B2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.22808837890625	2	422.228905	842.443257	-1.5227	-0.00064292	-0.47201	-0.0001993	-1.9947	-0.00084222	422.2286072039903	64.658	1.0335	64.658	64.292	65.325	0					111	47	3	0	0	0	0.80706	1	5699	5699		19.36	0	1	501820	+		63064	22318	41940	41957	71539	71539					0.015733065396716484
VMRRAQRR	8	Unmodified	_VMRRAQRR_					0	0	0			REV__ENST00000390658.3_2_19:40030637-40030694:-|nuORF	REV__ENST00000390658.3_2_19:40030637-40030694:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.8146362304688	2	536.817076	1071.6196	-0.95732	-0.00051391	-4.3655	-0.0023435	-5.3229	-0.0028574	536.8145477540568	60.919	1.1415	61.308	60.605	61.746	0.38945					62	34	3	0	0	0	0.87922	1	6503	6503		31.955	2.7848	1	4106400	+		63065	26002	41941	41958	71540	71540					0.0866536049345541
VMRRIYFR	8	Unmodified	_VMRRIYFR_					0	0	0			REV__nc|ENSG00000141837|O00555-5|CACNA1A	REV__nc|ENSG00000141837|O00555-5|CACNA1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	570.8233642578125	2	570.826578	1139.6386	0.51778	0.00029556	-4.47	-0.0025516	-3.9522	-0.002256	570.8238767890401	61.345	0.78047	61.464	61.349	62.129	0.11901					67	35	2	0	0	0	0.90465	1	5367	5367		40.573	8.6178	1	786490	+		63066	19710	41942	41959	71541	71541					0.0743689706450823
VMRRIYFRMRR	11	Unmodified	_VMRRIYFRMRR_					0	0	0			REV__nc|ENSG00000141837|O00555-5|CACNA1A	REV__nc|ENSG00000141837|O00555-5|CACNA1A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.764404296875	3	528.63438	1582.88131	1.0829	0.00057246	-2.1945	-0.0011601	-1.1115	-0.0005876	528.9677696593399	17.055	0.17871	16.573	16.493	16.672	-0.48256					6	3	2	0	0	0	0.18372	1	219	219		6.3209	4.9021	1	27305	+		63067	19710	41943	41960	71542	71542					0.1131839879801646
VMRTPTEIL	9	Unmodified	_VMRTPTEIL_					0	0	0		nc|ENSG00000225830|P0DP91|ERCC6	nc|ENSG00000225830|P0DP91|ERCC6	nc|ENSG00000225830|P0DP91|ERCC6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.298095703125	2	530.296985	1058.57942	-0.56621	-0.00030026	3.2959	0.0017478	2.7296	0.0014475	530.2982562988576	59.965	0.69888	60.518	60.119	60.818	0.55323					36	18	3	0	0	0	0.28163	1	6364	6364		66.429	0.6261	1	1040200			63068	15263	41944	41961	71543	71543					0.052469562596797914
VMSPLRTLL	9	Unmodified	_VMSPLRTLL_					0	0	0		nc|ENSG00000205853|P0C7P2|RFPL3S	nc|ENSG00000205853|P0C7P2|RFPL3S	nc|ENSG00000205853|P0C7P2|RFPL3S	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.3108520507812	2	515.309895	1028.60524	-0.51651	-0.00026616	-0.139	-7.1626E-05	-0.65551	-0.00033779	515.3096745064526	60.704	1.8309	61.094	60.444	62.275	0.38945					81	51	3	0	0	0	0.6204	1	6563	6563		45.972	5.9141	1	1902500			63069	15223	41945	41962	71544	71544					0.0920785050197992
VMVAHESGR	9	Unmodified	_VMVAHESGR_					0	0	0		ENSG00000130287|ENST00000252575|NCAN;ENST00000585410.1_1_19:19351440-19359696:+|nuORF	ENSG00000130287|ENST00000252575|NCAN	ENSG00000130287|ENST00000252575|NCAN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.2456970214844	2	493.247826	984.481099	-1.1617	-0.000573	-2.4684	-0.0012175	-3.63	-0.0017905	493.24654239461523	27.911	1.9472	27.888	27.422	29.369	-0.023556					123	54	4	0	0	0	0.51307	1	1348	1348		51.335	5.3835	1	1012800			63070	3629	41946	41963	71545	71545					-0.01176227265500529
VMVITGIAIV	10	Oxidation (M)	_VM(Oxidation (M))VITGIAIV_		VM(1)VITGIAIV		VM(46)VITGIAIV	0	0	1			REV__ENSG00000011105|ENST00000011898|TSPAN9	REV__ENSG00000011105|ENST00000011898|TSPAN9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3138427734375	2	516.312103	1030.60965	-0.047196	-2.4368E-05	3.3567	0.0017331	3.3095	0.0017087	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.67608	1	10640	10640		45.952	8.1404	1	63062000	+		63071	16176	41947	41964	71546	71546		232			0.09557314924882121
VMVITGIAIV	10	Oxidation (M)	_VM(Oxidation (M))VITGIAIV_		VM(1)VITGIAIV		VM(44)VITGIAIV	0	0	1			REV__ENSG00000011105|ENST00000011898|TSPAN9	REV__ENSG00000011105|ENST00000011898|TSPAN9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3140258789062	2	516.312103	1030.60965	2.7794	0.001435	0.50073	0.00025853	3.2801	0.0016935	516.3123421208538	99.274	3.6649	99.22	98.467	102.13	-0.053741					330	85	5	0	0	0	0.71042	1	10911	10911		44.117	11.304	1	67991000	+		63072	16176	41947	41964	71547	71547		232			0.09557314924882121
VMVLPILSTG	10	Oxidation (M)	_VM(Oxidation (M))VLPILSTG_		VM(1)VLPILSTG		VM(46)VLPILSTG	0	0	1			REV__ENSG00000174898|ENST00000381624|CATSPERD	REV__ENSG00000174898|ENST00000381624|CATSPERD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303466796875	2	523.301736	1044.58892	-0.041207	-2.1563E-05	3.5312	0.0018479	3.49	0.0018263	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.67608	1	9189	9189		45.952	14.422	1	12431000	+		63073	22022	41948	41965	71548	71548		331			0.06840724545190824
VMVLPILSTG	10	Oxidation (M)	_VM(Oxidation (M))VLPILSTG_		VM(1)VLPILSTG		VM(44)VLPILSTG	0	0	1			REV__ENSG00000174898|ENST00000381624|CATSPERD	REV__ENSG00000174898|ENST00000381624|CATSPERD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3036499023438	2	523.301736	1044.58892	-0.041135	-2.1526E-05	3.7644	0.0019699	3.7232	0.0019484	523.30361738985	91.645	2.4487	91.714	91.431	93.88	0.06987					99	57	2	0	0	0	0.71042	1	9486	9486		44.117	11.304	1	1067500	+		63074	22022	41948	41965	71549	71549		331			0.06840724545190824
VMVLPILSTG	10	Oxidation (M)	_VM(Oxidation (M))VLPILSTG_		VM(1)VLPILSTG		VM(46)VLPILSTG	0	0	1			REV__ENSG00000174898|ENST00000381624|CATSPERD	REV__ENSG00000174898|ENST00000381624|CATSPERD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3034057617188	2	523.301736	1044.58892	1.4247	0.00074556	1.9478	0.0010193	3.3725	0.0017648	523.3026239933643	86.571	3.0558	86.497	84.54	87.595	-0.073761					255	70	5	0	0	0	0.67608	1	8862	8862		45.952	9.5052	1	3882100	+		63075	22022	41948	41965	71550	71550		331			0.06840724545190824
VMVLPILSTG	10	Oxidation (M)	_VM(Oxidation (M))VLPILSTG_		VM(1)VLPILSTG		VM(46)VLPILSTG	0	0	1			REV__ENSG00000174898|ENST00000381624|CATSPERD	REV__ENSG00000174898|ENST00000381624|CATSPERD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.303955078125	2	523.301736	1044.58892	-0.1734	-9.0741E-05	3.5089	0.0018362	3.3355	0.0017455	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.67608	1	9092	9092		45.952	8.7928	1	13808000	+		63076	22022	41948	41965	71551	71551		331			0.06840724545190824
VMVSDKISL	9	Unmodified	_VMVSDKISL_					0	0	0			REV__nc|ENSG00000131791|O43741-2|PRKAB2	REV__nc|ENSG00000131791|O43741-2|PRKAB2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	496.2762756347656	2	496.27826	990.541968	-0.3131	-0.00015538	-3.2492	-0.0016125	-3.5623	-0.0017679	496.27651865051325	77.211	0.72578	77.779	77.453	78.179	0.56836					43	16	3	0	0	0	0.6204	1	8797	8797		45.972	0	1	1008400	+		63077	18968	41949	41966	71552	71552					0.046318649940758405
VMWHPSGRFL	10	Unmodified	_VMWHPSGRFL_					0	0	0		ENSG00000136875|ENST00000374198|PRPF4;nc|ENSG00000136875|O43172|PRPF4	ENSG00000136875|ENST00000374198|PRPF4	ENSG00000136875|ENST00000374198|PRPF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	615.3106689453125	2	615.316043	1228.61753	0.59105	0.00036368	-4.0734	-0.0025064	-3.4824	-0.0021427	615.3134003529922	80.681	1.4856	80.621	80.319	81.804	-0.059692					73	35	4	0	0	0	0.4892	1	8094	8094		56.721	6.6875	1	762530			63078	4149	41950	41967	71553	71553					0.012368869650345005
VNADIVHW	8	Unmodified	_VNADIVHW_					0	0	0		ENSG00000033178|ENST00000322244|UBA6	ENSG00000033178|ENST00000322244|UBA6	ENSG00000033178|ENST00000322244|UBA6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.2466735839844	2	477.245609	952.476666	0.42784	0.00020419	1.5249	0.00072774	1.9527	0.00093193	477.2463277042118	65.207	2.7144	65.593	64.688	67.402	0.38615					178	72	4	0	0	0	0.92973	1	7021	7021		50.025	4.0726	1	2278400			63079	891	41951	41968	71554	71554					-0.0014736841676494805
VNAETLIV	8	Unmodified	_VNAETLIV_					0	0	0			REV__ENSG00000163376|ENST00000417314|KBTBD8	REV__ENSG00000163376|ENST00000417314|KBTBD8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	429.7490234375	2	429.750193	857.485833	0.19062	8.192E-05	-1.2633	-0.00054292	-1.0727	-0.000461	429.7494836550346	40.163	2.386	40.244	39.962	42.348	0.081345					177	71	3	0	0	0	0.87479	1	2571	2571		30.504	2.6214	1	3979000	+		63080	20905	41952	41969	71555	71555					0.05138980148922201
VNAHSNILK	9	Unmodified	_VNAHSNILK_					0	0	0		nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-4|IMMT;ENSG00000132305|ENST00000410111|IMMT;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF	nc|ENSG00000132305|Q16891-3|IMMT	nc|ENSG00000132305|Q16891-3|IMMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.2851867675781	2	498.285266	994.555979	-0.99489	-0.00049574	0.12767	6.3616E-05	-0.86722	-0.00043212	498.28509250009324	27.51	0.70267	27.335	26.926	27.628	-0.17559					34	15	3	0	0	0	0.051853	3	1583	1583;1595;1610		107.01	24.257	1	650180			63081	3778	41953	41970	71556;71557;71558	71556					0.05848278537371243
VNAHSNILK	9	Unmodified	_VNAHSNILK_					0	0	0		nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-4|IMMT;ENSG00000132305|ENST00000410111|IMMT;ENST00000490238.5_1_2:86389097-86393741:-|nuORF;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000435590.1_1_21:46097057-46097849:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF	nc|ENSG00000132305|Q16891-3|IMMT	nc|ENSG00000132305|Q16891-3|IMMT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.28509521484375	2	498.285266	994.555979	1.2717	0.00063366	-2.2397	-0.001116	-0.96802	-0.00048235	498.2839851070317	27.503	0.73075	27.248	27.034	27.765	-0.25465					27	16	2	0	0	0	0.18338	2	1604	1604;1616		77.318	8.672	1	661130			63082	3778	41953	41970	71559;71560	71559					0.05848278537371243
VNALGLPK	8	Unmodified	_VNALGLPK_					0	0	0		nc|ENSG00000129116|Q8WX93-4|PALLD;nc|ENSG00000129116|Q8WX93-3|PALLD;nc|ENSG00000129116|Q8WX93|PALLD	nc|ENSG00000129116|Q8WX93-4|PALLD	nc|ENSG00000129116|Q8WX93-4|PALLD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2572021484375	2	406.255446	810.496338	0.27279	0.00011082	3.6804	0.0014952	3.9532	0.001606	406.25677816056157	49.48	2.6493	49.522	48.485	51.134	0.042236					135	72	3	0	0	0	0.87922	1	3895	3895		31.955	1.4512	1	326490			63083	14901	41954	41971	71561	71561					0.08351007593989834
VNATQVLI	8	Unmodified	_VNATQVLI_					0	0	0		ENSG00000175336|ENST00000398189|APOF	ENSG00000175336|ENST00000398189|APOF	ENSG00000175336|ENST00000398189|APOF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.749755859375	2	429.258185	856.501818	-0.13878	-5.9573E-05	0.0091252	3.9171E-06	-0.12966	-5.5656E-05	429.25809371825386	39.929	0.57385	39.881	39.608	40.182	-0.04789					22	14	2	0	0	0	0.4196	1	2524	2524		76.774	20.053	1	89091			63084	7010	41955	41972	71562	71562					0.06782686385793113
VNAVIIGIL	9	Unmodified	_VNAVIIGIL_					0	0	0			REV__ENST00000472488.5_1_1:160085570-160106822:+|nuORF;REV__nc|ENSG00000163399|P05023-3|ATP1A1;REV__ENSG00000075673|ENST00000381946|ATP12A;REV__ENSG00000132681|ENST00000368081|ATP1A4	REV__ENSG00000075673|ENST00000381946|ATP12A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3011779785156	2	456.299853	910.585153	-1.2643	-0.00057689	4.2328	0.0019314	2.9685	0.0013545	456.30161744594176	35.005	1.68	35.044	34.605	36.285	0.038643					125	54	3	0	0	0	0.77546	1	1806	1806		31.955	0	1	565550	+		63085	27261;20912;16716;19021	41956	41973	71563	71563					0.1262842283365444
VNAVRPIPF	9	Unmodified	_VNAVRPIPF_					0	0	0			REV__ENST00000552422.5_1_12:70671967-70701491:+|nuORF	REV__ENST00000552422.5_1_12:70671967-70701491:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.8015441894531	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.367	1	50.415	49.915	50.915	0.04747								0	0	0	0.31828	1	3956	3956		24.203	3.7209	1		+		63086	28625	41957	41974	71564	71564					0.08122056922422871
VNDIKTRSW	9	Unmodified	_VNDIKTRSW_					0	0	0		ENSG00000124491|ENST00000264870|F13A1	ENSG00000124491|ENST00000264870|F13A1	ENSG00000124491|ENST00000264870|F13A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	559.8010864257812	2	559.80128	1117.58801	-0.76325	-0.00042727	-1.8005	-0.0010079	-2.5637	-0.0014352	559.7999204810457	40.551	0.39139	40.52	40.3	40.692	-0.030991					21	11	2	0	0	0	0.3164	2	2905	2894;2905		63.534	13.998	1	170550			63087	3335	41958	41975	71565;71566	71566					0.03391646220529765
VNDIKTRSW	9	Unmodified	_VNDIKTRSW_					0	0	0		ENSG00000124491|ENST00000264870|F13A1	ENSG00000124491|ENST00000264870|F13A1	ENSG00000124491|ENST00000264870|F13A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	559.7998046875	2	559.80128	1117.58801	-0.90376	-0.00050593	-1.7443	-0.00097646	-2.6481	-0.0014824	559.8002844162496	40.433	0.44452	40.389	40.183	40.627	-0.043697					24	10	3	0	0	0	0.21969	1	2977	2977		71.877	11.759	1	172340			63088	3335	41958	41975	71567	71567					0.03391646220529765
VNDIKTRSW	9	Unmodified	_VNDIKTRSW_					0	0	0		ENSG00000124491|ENST00000264870|F13A1	ENSG00000124491|ENST00000264870|F13A1	ENSG00000124491|ENST00000264870|F13A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	559.8001708984375	2	559.80128	1117.58801	-0.72292	-0.00040469	-1.7716	-0.00099177	-2.4946	-0.0013965	559.80018655068	40.337	0.4492	40.347	40.158	40.607	0.0092773					23	10	3	0	0	0	0.26953	2	2910	2898;2910		67.494	18.052	1	147700			63089	3335	41958	41975	71568;71569	71569					0.03391646220529765
VNEELLRVQ	9	Unmodified	_VNEELLRVQ_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.2962646484375	2	550.308938	1098.60332	0.22784	0.00012538	-0.30799	-0.00016949	-0.080147	-4.4105E-05	550.3087229601335	31.292	1.3765	31.296	30.71	32.086	0.0037193					63	31	4	0	0	0	0.20789	1	2158	2158		16.473	0	1	1781500	+		63090	22085	41959	41976	71570	71570					0.05796513017708094
VNEKEIGKLLL	11	Unmodified	_VNEKEIGKLLL_					0	0	0		nc|ENSG00000109046|Q9Y6I7-2|WSB1	nc|ENSG00000109046|Q9Y6I7-2|WSB1	nc|ENSG00000109046|Q9Y6I7-2|WSB1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.8841552734375	2	628.384645	1254.75474	1.0207	0.00064136	2.0437	0.0012842	3.0643	0.0019256	628.385719632678	114.97	2.3208	115	114.26	116.58	0.026459					83	68	2	0	0	0	0.17643	1	12704	12704		19.997	0.89325	1	340090			63091	14838	41960	41977	71571	71571					0.13755074325581518
VNEPLAKN	8	Unmodified	_VNEPLAKN_					0	0	0			REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	REV__ENST00000490659.5_1_10:97583001-97604470:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.7446594238281	2	442.745442	883.476331	1.7711	0.00078413	-3.0311	-0.001342	-1.26	-0.00055788	442.7439445464006	89.634	1.1663	89.682	89.309	90.476	0.048157					52	26	3	0	0	0	0.884	1	9255	9255		33.516	4.366	1	715740	+		63092	19449	41961	41978	71572	71572					0.029932118633723803
VNEVIPSPPV	10	Unmodified	_VNEVIPSPPV_					0	0	0		ENST00000459993.5_1_3:56655037-56655307:-|nuORF	ENST00000459993.5_1_3:56655037-56655307:-|nuORF	ENST00000459993.5_1_3:56655037-56655307:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.258056640625	2	525.795132	1049.57571	0.66553	0.00034993	-1.436	-0.00075506	-0.77051	-0.00040513	525.7945497059596	51.105	0.2911	51.54	51.409	51.7	0.43505					10	6	2	0	0	0	0.37624	1	5065	5065		23.523	0	1	96912			63093	11999	41962	41979	71573	71573					0.05290609757457787
VNGGITKQTHT	11	Unmodified	_VNGGITKQTHT_					0	0	0			REV__ENSG00000111670|ENST00000299314|GNPTAB	REV__ENSG00000111670|ENST00000299314|GNPTAB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	578.3097534179688	2	578.309469	1154.60439	0.66204	0.00038287	1.3221	0.00076457	1.9841	0.0011474	578.3100530437905	110.07	1.6087	110.19	110.03	111.64	0.11946					88	58	4	0	0	0	0.69248	1	11887	11887		32.751	3.601	1	2568100	+		63094	17883	41963	41980	71574	71574					0.033267273866158575
VNGGVPYSGLR	11	Unmodified	_VNGGVPYSGLR_					0	0	0			REV__ENSG00000166278|ENST00000299367|C2	REV__ENSG00000166278|ENST00000299367|C2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.297607421875	2	559.80128	1117.58801	-0.90376	-0.00050593	-1.7443	-0.00097646	-2.6481	-0.0014824	559.8002844162496	40.433	0.44452	40.389	40.183	40.627	-0.043697					24	10	3	0	0	0	0.48313	1	2989	2989		53.089	7.1167	1	172340	+		63095	21276	41964	41981	71575	71575					0.033916462205070275
VNGKCFPL	8	Unmodified	_VNGKCFPL_					0	0	0			REV__ENSG00000167359|ENST00000380211|OR51I1	REV__ENSG00000167359|ENST00000380211|OR51I1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2574157714844	2	439.233656	876.452759	-1.2321	-0.00054117	-3.8475	-0.0016899	-5.0795	-0.0022311	439.2309656086376	29.56	0.51874	29.531	29.343	29.862	-0.029209					19	11	2	0	0	0	0.4196	1	1873	1873		19.36	0	1	52203	+		63096	21380	41965	41982	71576	71576					0.009590748251980585
VNGKKPRSP	9	Unmodified	_VNGKKPRSP_					0	0	0		ENST00000552835.5_1_12:93711311-93771460:-|nuORF	ENST00000552835.5_1_12:93711311-93771460:-|nuORF	ENST00000552835.5_1_12:93711311-93771460:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.298828125	2	491.793258	981.571963	0.13478	6.6286E-05	4.4765	0.0022015	4.6113	0.0022678	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.77696	1	5526	5526		31.53	3.6476	1	176030			63097	13686	41966	41983	71577	71577					0.08043984774269575
VNGKVLSK	8	Unmodified	_VNGKVLSK_					0	0	0		ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.7650451660156	2	422.766178	843.517802	1.0915	0.00046143	-0.24242	-0.00010249	0.84905	0.00035895	422.76588238789265	21.14	0.4752	20.681	20.424	20.9	-0.4591					19	10	2	0	0	0	0.8621	2	724	724;737		49.442	10.635	1	93446			63098	2066	41967	41984	71578;71579	71578					0.08978392622702813
VNGKVLSK	8	Unmodified	_VNGKVLSK_					0	0	0		ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	ENSG00000185164|ENST00000622306|NOMO2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.76568603515625	2	422.766178	843.517802	0.12476	5.2744E-05	0.43619	0.00018441	0.56095	0.00023715	422.7662227746885	21.327	0.52031	20.699	20.462	20.982	-0.62835					22	13	2	0	0	0	0.91546	1	764	764		44.377	16.495	1	135160			63099	2066	41967	41984	71580	71580					0.08978392622702813
VNGLFYGATQG	11	Unmodified	_VNGLFYGATQG_					0	0	0			REV__ENST00000460729.1_1_3:155562845-155571132:-|nuORF	REV__ENST00000460729.1_1_3:155562845-155571132:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.7781372070312	2	563.780013	1125.54547	1.0624	0.00059895	-3.9923	-0.0022508	-2.9299	-0.0016518	563.7771928359884	25.681	0.52278	25.649	25.398	25.921	-0.032125					27	15	2	0	0	0	0.67778	1	1043	1043		35.152	2.3396	1	68855	+		63100	21574	41968	41985	71581	71581					-0.012277489077177961
VNGLPKGR	8	Unmodified	_VNGLPKGR_					0	0	0		ENSG00000221978|ENST00000400809|CCNL2;ENST00000463260.5_1_1:1322613-1323455:-|nuORF;nc|ENSG00000221978|Q96S94-3|CCNL2;ENST00000482621.5_1_1:1322613-1328165:-|nuORF;ENST00000481223.6_1_1:1322613-1326370:-|nuORF	ENSG00000221978|ENST00000400809|CCNL2	ENSG00000221978|ENST00000400809|CCNL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.7548522949219	2	420.756144	839.497735	-0.39386	-0.00016572	-1.7444	-0.00073398	-2.1383	-0.0008997	420.7553186920564	20.988	1.6049	20.924	19.96	21.565	-0.064743					109	65	2	0	0	0	0.79929	1	577	577		18.324	0	1	83540			63101	8690	41969	41986	71582	71582					0.07156641682752252
VNGPTALH	8	Unmodified	_VNGPTALH_					0	0	0			REV__chr21:18379318-18380540|34|169.09|0.44|8.57|-|ENST00000422787|TMPRSS15,TMPRSS15	REV__chr21:18379318-18380540|34|169.09|0.44|8.57|-|ENST00000422787|TMPRSS15,TMPRSS15	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.7184753417969	2	404.719227	807.423902	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.732	1	74.775	74.275	75.275	0.0429								0	0	0	0.29497	1	7159	7159		34.173	7.4796	1		+		63102	15784	41970	41987	71583	71583					0.01248673520410648
VNHLNGKRL	9	Unmodified	_VNHLNGKRL_					0	0	0			REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.31640625	2	525.811982	1049.60941	2.4203	0.0012726	4.2822	0.0022517	6.7025	0.0035243	525.8148344392195	106.1	1.1594	106.23	105.62	106.78	0.12742					80	45	3	0	0	0	0.74721	1	12906	12906		37.159	4.3467	1	143960	+		63103	19957	41971	41988	71584	71584					0.08659076039884894
VNIGILIAV	9	Unmodified	_VNIGILIAV_					0	0	0		nc|ENSG00000111452|Q6QNK2-4|ADGRD1;nc|ENSG00000111452|Q6QNK2-3|ADGRD1;nc|ENSG00000111452|Q6QNK2-2|ADGRD1;ENSG00000111452|ENST00000261654|ADGRD1;ENST00000540207.1_1_12:131606534-131623805:+|nuORF	nc|ENSG00000111452|Q6QNK2-4|ADGRD1	nc|ENSG00000111452|Q6QNK2-4|ADGRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3011779785156	2	456.299853	910.585153	-1.267	-0.00057813	4.2907	0.0019578	3.0237	0.0013797	456.3016565043114	33.346	1.5471	33.392	33.095	34.642	0.045853					160	67	4	0	0	0	0.78058	1	1626	1626		30.504	2.6214	1	1558600			63104	14845	41972	41989	71585	71585					0.1262842283365444
VNIGILIAV	9	Unmodified	_VNIGILIAV_					0	0	0		nc|ENSG00000111452|Q6QNK2-4|ADGRD1;nc|ENSG00000111452|Q6QNK2-3|ADGRD1;nc|ENSG00000111452|Q6QNK2-2|ADGRD1;ENSG00000111452|ENST00000261654|ADGRD1;ENST00000540207.1_1_12:131606534-131623805:+|nuORF	nc|ENSG00000111452|Q6QNK2-4|ADGRD1	nc|ENSG00000111452|Q6QNK2-4|ADGRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.3011474609375	2	456.299853	910.585153	0.16746	7.6412E-05	2.7809	0.0012689	2.9484	0.0013454	456.30098393638264	34.91	1.4474	35.016	34.575	36.022	0.10603					127	53	3	0	0	0	0.7932	1	1792	1792		26.796	0	1	751300			63105	14845	41972	41989	71586	71586					0.1262842283365444
VNIIRENN	8	Unmodified	_VNIIRENN_					0	0	0			REV__nc|ENSG00000138684|Q9HBE4-2|IL21	REV__nc|ENSG00000138684|Q9HBE4-2|IL21	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2673034667969	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.89962	1	8210	8210		38.806	0.99462	1	1182200	+		63106	19495	41973	41990	71587	71587					0.03315401640657001
VNILAKQPLP	10	Unmodified	_VNILAKQPLP_					0	0	0			REV__ENST00000204726.7_3_12:133349606-133349690:-|nuORF	REV__ENST00000204726.7_3_12:133349606-133349690:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8416137695312	2	546.842416	1091.67028	-0.49529	-0.00027085	-3.9856	-0.0021795	-4.4809	-0.0024504	546.8402497724348	101.28	3.7061	101.28	100.69	104.39	0					228	91	5	0	0	0	0.8608	1	10597	10597		34.173	8.5985	1	22090000	+		63107	24098	41974	41991	71588	71588					0.12811168299458586
VNILYQALSI	10	Unmodified	_VNILYQALSI_					0	0	0			REV__chr12:53471807-53474874|37|20.16|0.43|5.57|+|1|PCBP2,None|1	REV__chr12:53471807-53474874|37|20.16|0.43|5.57|+|1|PCBP2,None|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3303833007812	2	567.331882	1132.64921	-0.54401	-0.00030863	-2.6363	-0.0014957	-3.1803	-0.0018043	567.3302633347022	90.796	2.9284	90.796	88.833	91.761	0					267	68	5	0	0	0	0.86718	1	8953	8953		27.882	2.4321	1	4477200	+		63108	15540	41975	41992	71589	71589					0.0881915819995811
VNIPPFPR	8	Unmodified	_VNIPPFPR_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.2721252441406	2	470.27417	938.533787	-0.1113	-5.2342E-05	-4.1714	-0.0019617	-4.2827	-0.002014	470.27219532048343	92.361	2.6069	92.431	91.273	93.88	0.06987					140	61	4	0	0	0	0.87479	1	9528	9528		30.504	1.3541	1	1898400	+		63109	23025	41976	41993	71590	71590					0.06206098859604481
VNIQKKNTD	9	Unmodified	_VNIQKKNTD_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2931518554688	2	530.293288	1058.57202	1.2413	0.00065826	-1.0988	-0.00058268	0.14254	7.5586E-05	530.2926240857315	90.427	3.7281	90.474	89.35	93.079	0.046448					311	88	5	0	0	0	0.77696	1	9367	9367		31.53	0	1	1864800	+		63110	18541	41977	41994	71591	71591					0.04507939983614051
VNIQKKNTD	9	Unmodified	_VNIQKKNTD_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2933349609375	2	530.293288	1058.57202	-1.5163	-0.00080409	1.7205	0.00091237	0.2042	0.00010828	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.71772	2	9024	8927;9024		39.253	4.1008	1	1686700	+		63111	18541	41977	41994	71592;71593	71593					0.04507939983614051
VNIQKKNTD	9	Unmodified	_VNIQKKNTD_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2930908203125	2	530.293288	1058.57202	-1.2396	-0.00065735	1.1575	0.00061382	-0.082084	-4.3529E-05	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.71772	1	10747	10747		39.253	2.8061	1	1818700	+		63112	18541	41977	41994	71594	71594					0.04507939983614051
VNISASFRRK	10	Unmodified	_VNISASFRRK_					0	0	0		ENST00000505669.5_1_5:148737686-148748214:+|nuORF;ENST00000503240.5_1_5:148743537-148748214:+|nuORF;ENSG00000145882|ENST00000274569|PCYOX1L	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3425903320312	2	589.343646	1176.67274	-0.36759	-0.00021664	-0.80413	-0.00047391	-1.1717	-0.00069055	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.86587	1	9405	9405		29.17	2.4771	1	11103000			63113	12927	41978	41995	71595	71595					0.09147016757128767
VNISASFRRK	10	Unmodified	_VNISASFRRK_					0	0	0		ENST00000505669.5_1_5:148737686-148748214:+|nuORF;ENST00000503240.5_1_5:148743537-148748214:+|nuORF;ENSG00000145882|ENST00000274569|PCYOX1L	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3426513671875	2	589.343646	1176.67274	-0.65315	-0.00038493	-0.88363	-0.00052076	-1.5368	-0.00090569	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.86106	2	9554	9554;9709		33.922	2.3598	1	5584100			63114	12927	41978	41995	71596;71597	71596					0.09147016757128767
VNISASFRRK	10	Unmodified	_VNISASFRRK_					0	0	0		ENST00000505669.5_1_5:148737686-148748214:+|nuORF;ENST00000503240.5_1_5:148743537-148748214:+|nuORF;ENSG00000145882|ENST00000274569|PCYOX1L	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3428344726562	2	589.343646	1176.67274	-0.65438	-0.00038565	-0.61013	-0.00035958	-1.2645	-0.00074523	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.86587	1	9875	9875		29.17	1.0886	1	16804000			63115	12927	41978	41995	71598	71598					0.09147016757128767
VNISASFRRK	10	Unmodified	_VNISASFRRK_					0	0	0		ENST00000505669.5_1_5:148737686-148748214:+|nuORF;ENST00000503240.5_1_5:148743537-148748214:+|nuORF;ENSG00000145882|ENST00000274569|PCYOX1L	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3427124023438	2	589.343646	1176.67274	0.83312	0.00049099	-2.1148	-0.0012464	-1.2817	-0.00075536	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.86587	2	9607	9607;9727		29.17	1.0886	1	20363000			63116	12927	41978	41995	71599;71600	71599					0.09147016757128767
VNISASFRRK	10	Unmodified	_VNISASFRRK_					0	0	0		ENST00000505669.5_1_5:148737686-148748214:+|nuORF;ENST00000503240.5_1_5:148743537-148748214:+|nuORF;ENSG00000145882|ENST00000274569|PCYOX1L	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	ENST00000505669.5_1_5:148737686-148748214:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3421020507812	2	589.343646	1176.67274	-1.324	-0.0007803	0.030284	1.7848E-05	-1.2937	-0.00076245	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.80179	2	9531	9507;9531		39.253	7.723	1	17904000			63117	12927	41978	41995	71601;71602	71602					0.09147016757128767
VNIVCHSKTRS	11	Unmodified	_VNIVCHSKTRS_					0	0	0		nc|ENSG00000159352|P55036-2|PSMD4;ENSG00000159352|ENST00000368884|PSMD4;ENST00000462970.5_1_1:151227258-151237442:+|nuORF;ENST00000461434.1_1_1:151227258-151234901:+|nuORF	nc|ENSG00000159352|P55036-2|PSMD4	nc|ENSG00000159352|P55036-2|PSMD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.338623046875	2	622.332421	1242.65029	2.3783	0.0014801	3.19	0.0019852	5.5683	0.0034653	622.3342365871133	110.19	0.38945	110.24	110.14	110.52	0.054062					28	12	3	0	0	0	0.69248	1	13349	13349		32.751	17.417	1	822300			63118	5526	41979	41996	71603	71603					0.0386704929719599
VNIVCHSKTRS	11	Unmodified	_VNIVCHSKTRS_					0	0	0		nc|ENSG00000159352|P55036-2|PSMD4;ENSG00000159352|ENST00000368884|PSMD4;ENST00000462970.5_1_1:151227258-151237442:+|nuORF;ENST00000461434.1_1_1:151227258-151234901:+|nuORF	nc|ENSG00000159352|P55036-2|PSMD4	nc|ENSG00000159352|P55036-2|PSMD4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	622.332421	1242.65029	6.2897	0.0039143	-1.034	-0.00064351	5.2557	0.0032708	622.3315163945003	110.19	0.41081	110.25	110.08	110.49	0.068001	0.0050608	-0.0030367	NaN	32.751	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	599590			63119	5526	41979	41996							0.0386704929719599
VNIVGDRP	8	Unmodified	_VNIVGDRP_					0	0	0			REV__ENST00000529993.5_1_11:68154039-68171824:+|nuORF	REV__ENST00000529993.5_1_11:68154039-68171824:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.24554443359375	2	435.245609	868.476666	-1.0875	-0.00047334	1.0568	0.00045997	-0.030712	-1.3367E-05	435.24592093978197	47.407	1.4414	47.878	47.432	48.873	0.47139					84	35	4	0	0	0	0.87259	1	4513	4513		58.782	5.8453	1	7743100	+		63120	28275	41980	41997	71604	71604					0.037166315832337204
VNIVPVPL	8	Unmodified	_VNIVPVPL_					0	0	0			REV__ENST00000230461.10_1_6:75977403-75994215:-|nuORF	REV__ENST00000230461.10_1_6:75977403-75994215:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.295166015625	2	425.773471	849.53239	-0.83746	-0.00035657	2.7485	0.0011703	1.9111	0.00081368	425.775474617277	72.534	0.54099	72.92	72.541	73.082	0.38581					16	12	2	0	0	0	0.4196	1	8123	8123		26.796	0	1	40951	+		63121	24193	41981	41998	71605	71605					0.10160464770854105
VNIVTRLGVKV	11	Unmodified	_VNIVTRLGVKV_					0	0	0			REV__L1MC1_dup5266|chr6:80042944-80044043:-|1.7108556766587488|0.133159998821808|3.68|63.0|12|1|sense	REV__L1MC1_dup5266|chr6:80042944-80044043:-|1.7108556766587488|0.133159998821808|3.68|63.0|12|1|sense	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.38671875	2	599.387522	1196.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.607	1	15.583	15.083	16.083	-0.024207								0	0	0	0.56276	1	55	55		21.686	1.689	1		+		63122	29528	41982	41999	71606	71606					0.16998217627883605
VNKAIRKFEL	10	Unmodified	_VNKAIRKFEL_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|7|1|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|7|1|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.9441287312316804|0.2509383892152794|2.95|63.0|7|1|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5832824707031	3	406.583674	1216.72919	3.1308	0.0012729	-2.164	-0.00087985	0.96679	0.00039308	406.5827071519945	112.24	0.82966	112.27	112.06	112.89	0.030602					58	32	2	0	0	0	0.86802	1	13623	13623		27.047	4.4677	1	1459000			63123	14661	41983	42000	71607	71607					0.12949644593800258
VNKKLKTDHKV	11	Unmodified	_VNKKLKTDHKV_					0	0	0		nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000170234|Q96N64-2|PWWP2A;ENSG00000170234|ENST00000307063|PWWP2A	nc|ENSG00000170234|Q96N64-3|PWWP2A	nc|ENSG00000170234|Q96N64-3|PWWP2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2678527832031	3	437.269866	1308.78777	-1.7231	-0.00075344	-2.8954	-0.0012661	-4.6185	-0.0020195	437.26850375985913	50.916	1.5264	50.916	50.06	51.586	0					171	39	5	0	0	0	0.75457	2	4135	4135;4177		21.032	5.1116	1	3001200			63124	6568	41984	42001	71608;71609	71608					0.14572701168253843
VNKKLKTDHKV	11	Unmodified	_VNKKLKTDHKV_					0	0	0		nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000170234|Q96N64-2|PWWP2A;ENSG00000170234|ENST00000307063|PWWP2A	nc|ENSG00000170234|Q96N64-3|PWWP2A	nc|ENSG00000170234|Q96N64-3|PWWP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26788330078125	3	437.269866	1308.78777	-0.7643	-0.0003342	-3.8462	-0.0016818	-4.6105	-0.002016	437.2680989446087	50.458	1.6052	50.435	49.633	51.238	-0.02343					188	43	5	0	0	0	0.75121	3	4417	4397;4417;4425		21.78	1.8362	1	2919200			63125	6568	41984	42001	71610;71611;71612	71611					0.14572701168253843
VNKKLKTDHKV	11	Unmodified	_VNKKLKTDHKV_					0	0	0		nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000170234|Q96N64-2|PWWP2A;ENSG00000170234|ENST00000307063|PWWP2A	nc|ENSG00000170234|Q96N64-3|PWWP2A	nc|ENSG00000170234|Q96N64-3|PWWP2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.267333984375	3	437.269866	1308.78777	-0.73822	-0.0003228	-3.8393	-0.0016788	-4.5775	-0.0020016	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.76892	1	4714	4714		17.833	3.1395	1	3639500			63126	6568	41984	42001	71613	71613					0.14572701168253843
VNKKLKTDHKV	11	Unmodified	_VNKKLKTDHKV_					0	0	0		nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000170234|Q96N64-2|PWWP2A;ENSG00000170234|ENST00000307063|PWWP2A	nc|ENSG00000170234|Q96N64-3|PWWP2A	nc|ENSG00000170234|Q96N64-3|PWWP2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.26812744140625	3	437.269866	1308.78777	-1.575	-0.00068869	-2.9633	-0.0012958	-4.5383	-0.0019845	437.2684891533513	50.52	1.5365	50.549	49.784	51.32	0.029633					190	45	5	0	0	0	0.74002	1	4011	4011		24.276	6.4428	1	3429700			63127	6568	41984	42001	71614	71614					0.14572701168253843
VNKKLKTDHKV	11	Unmodified	_VNKKLKTDHKV_					0	0	0		nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000170234|Q96N64-2|PWWP2A;ENSG00000170234|ENST00000307063|PWWP2A	nc|ENSG00000170234|Q96N64-3|PWWP2A	nc|ENSG00000170234|Q96N64-3|PWWP2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26788330078125	3	437.269866	1308.78777	-0.49223	-0.00021524	-4.0286	-0.0017616	-4.5208	-0.0019768	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.75121	1	4040	4040		21.78	1.75	1	3262400			63128	6568	41984	42001	71615	71615					0.14572701168253843
VNKVHVGG	8	Unmodified	_VNKVHVGG_					0	0	0		ENSG00000197763|ENST00000524230|TXNRD3;ENST00000524230.6_3_3:126326756-126373974:-|nuORF	ENSG00000197763|ENST00000524230|TXNRD3	ENSG00000197763|ENST00000524230|TXNRD3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.2373962402344	2	405.235045	808.455536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.375	1	25.48	24.98	25.98	0.1054								0	0	0	0.29353	1	913	913		28.254	7.7724	1				63129	8196	41985	42002	71616	71616					0.04364666274386764
VNKVKNKN	8	Unmodified	_VNKVKNKN_					0	0	0		ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2877197265625	2	472.287808	942.561064	-0.38047	-0.00017969	0.44126	0.0002084	0.060793	2.8712E-05	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.87479	1	11352	11352		30.504	1.3541	1	24731000			63130	2874	41986	42003	71617	71617					0.0874858239999412
VNKVPLTGK	9	Unmodified	_VNKVPLTGK_					0	0	0		ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.2995300292969	2	478.300384	954.586216	-0.38869	-0.00018591	0.32086	0.00015347	-0.067828	-3.2442E-05	478.3004250385609	29.869	0.83113	29.897	29.531	30.362	0.028618					42	18	3	0	0	0	0.17181	2	1913	1913;1922		79.713	15.505	1	374000			63131	5096	41987	42004	71618;71619	71618					0.10710637202555517
VNKVPLTGK	9	Unmodified	_VNKVPLTGK_					0	0	0		ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.29974365234375	2	478.300384	954.586216	-0.62144	-0.00029723	0.67098	0.00032093	0.049542	2.3696E-05	478.30054458646293	30.07	0.99867	29.981	29.575	30.573	-0.089544					46	22	3	0	0	0	0.17181	1	1960	1960		79.713	21.901	1	452830			63132	5096	41987	42004	71620	71620					0.10710637202555517
VNKVPVTMT	9	Unmodified	_VNKVPVTMT_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7796325683594	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.687	1	84.835	84.335	85.335	0.14793								0	0	0	0.31117	1	8256	8256		26.693	2.4902	1				63133	5333	41988	42005	71621	71621					0.0480328471392113
VNKVRSQI	8	Unmodified	_VNKVRSQI_					0	0	0			REV__ENSG00000188089|ENST00000696112|PLA2G4E	REV__ENSG00000188089|ENST00000696112|PLA2G4E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28759765625	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.89962	1	9996	9996		38.806	1.647	1	48574000	+		63134	22977	41989	42006	71622	71622					0.08748582400005489
VNKVTRSH	8	Unmodified	_VNKVTRSH_					0	0	0			REV__ENST00000394563.4_1_X:85340081-85340624:-|nuORF	REV__ENST00000394563.4_1_X:85340081-85340624:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.76910400390625	2	470.769783	939.525013	0.34379	0.00016185	-2.4863	-0.0011705	-2.1425	-0.0010086	470.7684816235904	52.862	1.8115	52.933	52.433	54.244	0.070713					111	49	3	0	0	0	0.89962	1	4357	4357		38.806	5.2906	1	1863100	+		63135	26085	41990	42007	71623	71623					0.05283125223149909
VNLAASHPA	9	Unmodified	_VNLAASHPA_					0	0	0			REV__ENSG00000154265|ENST00000392676|ABCA5	REV__ENSG00000154265|ENST00000392676|ABCA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.236328125	2	440.237784	878.461016	-2.1641	-0.00095272	2.7837	0.0012255	0.6196	0.00027277	440.23883327013453	18.302	0.34579	18.302	18.177	18.523	0					19	14	2	0	0	0	0.78536	1	292	292		29.15	3.6994	1	38593	+		63136	20379	41991	42008	71624	71624					0.016923450661806783
VNLAKFRKLQH	11	Unmodified	_VNLAKFRKLQH_					0	0	0		ENSG00000264424|ENST00000255381|MYH4	ENSG00000264424|ENST00000255381|MYH4	ENSG00000264424|ENST00000255381|MYH4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9421081542969	3	451.941973	1352.80409	0.028854	1.304E-05	2.8756	0.0012996	2.9044	0.0013126	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.72374	1	4830	4830		27.644	5.8635	1	513120			63137	8943	41992	42009	71625	71625					0.14179827125030897
VNLARPRA	8	Unmodified	_VNLARPRA_					0	0	0			REV__nc|ENSG00000124159|O95460-4|MATN4	REV__nc|ENSG00000124159|O95460-4|MATN4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.2589111328125	2	448.774868	895.535184	0.6554	0.00029413	-1.9751	-0.00088639	-1.3197	-0.00059226	448.77393883802785	90.075	0.80968	90.229	89.787	90.597	0.15347					24	18	2	0	0	0	0.4196	1	9045	9045		10.866	0	1	52603	+		63138	15776	41993	42010	71626	71626					0.08323732948372253
VNLEKQGTQ	9	Unmodified	_VNLEKQGTQ_					0	0	0		ENST00000512756.5_1_1:103381188-103385880:-|nuORF	ENST00000512756.5_1_1:103381188-103385880:-|nuORF	ENST00000512756.5_1_1:103381188-103385880:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2410583496094	2	508.772188	1015.52982	2.1809	0.0011096	0.93691	0.00047667	3.1179	0.0015863	508.7724274259694	35.837	0.49756	36.277	36.036	36.534	0.44043					19	12	2	0	0	0	0.20789	1	2765	2765		45.972	10.82	1	548620			63139	13042	41994	42011	71627	71627					0.022679645752418764
VNLEKQGTQ	9	Unmodified	_VNLEKQGTQ_					0	0	0		ENST00000512756.5_1_1:103381188-103385880:-|nuORF	ENST00000512756.5_1_1:103381188-103385880:-|nuORF	ENST00000512756.5_1_1:103381188-103385880:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	508.772188	1015.52982	0.61101	0.00031086	1.7444	0.0008875	2.3554	0.0011984	508.77270325165904	35.934	0.75998	36.182	35.554	36.314	0.24769	-0.047437	0.00041697	NaN	45.972	36	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	461030			63140	13042	41994	42011							0.022679645752418764
VNLFHVQSLLL	11	Unmodified	_VNLFHVQSLLL_					0	0	0		ENST00000259622.10_2_9:1056133-1057270:+|nuORF	ENST00000259622.10_2_9:1056133-1057270:+|nuORF	ENST00000259622.10_2_9:1056133-1057270:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.882568359375	2	641.87953	1281.74451	2.6248	0.0016848	1.9473	0.0012499	4.5721	0.0029347	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.67778	1	11846	11846		35.152	2.3396	1	4455800			63141	9379	41995	42012	71628	71628					0.11490511391002656
VNLFIGLV	8	Unmodified	_VNLFIGLV_					0	0	0			REV__ENSG00000124786|ENST00000644923|SLC35B3	REV__ENSG00000124786|ENST00000644923|SLC35B3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	438.2634582519531	2	437.773471	873.53239	-1.592	-0.00069695	-2.9834	-0.001306	-4.5754	-0.002003	437.77216236382276	37.39	0.96629	37.409	36.723	37.69	0.018356					41	24	2	0	0	0	0.4196	1	2063	2063		33.516	17.874	1	210100	+		63142	18613	41996	42013	71629	71629					0.09056464770833372
VNLKQSGTVN	10	Unmodified	_VNLKQSGTVN_					0	0	0		ENST00000490758.6_1_1:109656894-109730836:+|nuORF;nc|ENSG00000116299|Q6UXG2-3|ELAPOR1;ENST00000527996.5_1_1:109656894-109745573:+|nuORF;nc|ENSG00000116299|Q6UXG2-2|ELAPOR1;nc|ENSG00000116299|Q6UXG2-4|ELAPOR1;ENSG00000116299|ENST00000369939|ELAPOR1	ENST00000490758.6_1_1:109656894-109730836:+|nuORF	ENST00000490758.6_1_1:109656894-109730836:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2929077148438	2	530.293288	1058.57202	-0.066725	-3.5384E-05	0.20402	0.00010819	0.1373	7.2808E-05	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.82886	1	9230	9230		37.812	3.639	1	2084800			63143	2916	41997	42014	71630	71630					0.04507939983614051
VNLKQSGTVN	10	Unmodified	_VNLKQSGTVN_					0	0	0		ENST00000490758.6_1_1:109656894-109730836:+|nuORF;nc|ENSG00000116299|Q6UXG2-3|ELAPOR1;ENST00000527996.5_1_1:109656894-109745573:+|nuORF;nc|ENSG00000116299|Q6UXG2-2|ELAPOR1;nc|ENSG00000116299|Q6UXG2-4|ELAPOR1;ENSG00000116299|ENST00000369939|ELAPOR1	ENST00000490758.6_1_1:109656894-109730836:+|nuORF	ENST00000490758.6_1_1:109656894-109730836:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2930297851562	2	530.293288	1058.57202	-1.5163	-0.00080409	1.7205	0.00091237	0.2042	0.00010828	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.8545	1	9169	9169		36.447	2.2742	1	1686700			63144	2916	41997	42014	71631	71631					0.04507939983614051
VNLLASAL	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VNLLASAL_					1	0	0			REV__ENST00000441724.1_1_1:6298741-6298981:+|nuORF	REV__ENST00000441724.1_1_1:6298741-6298981:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.75152587890625	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.621	1	77.674	77.174	78.174	0.052696								0	0	0	0.26869	1	7517	7517		57.811	13.694	1		+		63145	26759	41998	42015	71632	71632					0.06383284011519663
VNLLILSHHSE	11	Unmodified	_VNLLILSHHSE_					0	0	0		ENSG00000169992|ENST00000302926|NLGN2	ENSG00000169992|ENST00000302926|NLGN2	ENSG00000169992|ENST00000302926|NLGN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	421.2358093261719	3	421.234822	1260.68264	0.22521	9.4866E-05	-0.2644	-0.00011137	-0.039189	-1.6508E-05	421.2345198926206	44.301	0.69176	44.35	44.089	44.781	0.048996					32	16	3	0	0	0	0.54689	1	3114	3114		48.602	2.6934	1	196630			63146	6549	41999	42016	71633	71633					0.06272159971854308
VNLNVLREAVR	11	Unmodified	_VNLNVLREAVR_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8826904296875	2	641.883136	1281.75172	0.89498	0.00057447	-2.058	-0.001321	-1.163	-0.00074653	641.8816647321656	95.707	2.6304	95.87	94.248	96.878	0.16316					218	62	4	0	0	0	0.732	1	9946	9946		26.063	6.0666	1	2156900			63147	4393	42000	42017	71634	71634					0.12211243991396259
VNLPGKFF	8	Unmodified	_VNLPGKFF_					0	0	0			REV__ENSG00000182674|ENST00000523207|KCNB2	REV__ENSG00000182674|ENST00000523207|KCNB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.2649841308594	2	461.263271	920.511988	1.7427	0.00080384	2.0278	0.00093537	3.7705	0.0017392	461.26406026180877	93.142	1.6342	93.081	92.591	94.226	-0.061432					103	38	3	0	0	0	0.884	1	9864	9864		33.516	0	1	1239800	+		63148	22542	42001	42018	71635	71635					0.048552941110415304
VNLPINGNGKQ	11	Unmodified	_VNLPINGNGKQ_					0	0	0		ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF;ENSG00000084207|ENST00000398606|GSTP1	ENST00000494593.1_1_11:67353853-67354045:+|nuORF	ENST00000494593.1_1_11:67353853-67354045:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	577.31591796875	2	577.319837	1152.62512	-2.8934	-0.0016704	1.2681	0.0007321	-1.6253	-0.00093833	577.320427491126	41.563	0.52603	41.977	41.787	42.313	0.4139					32	13	3	0	0	0	0.32928	1	3653	3653		67.494	2.0283	1	1215800			63149	1515	42002	42019	71636	71636					0.054913177662683665
VNLPPELRRQ	10	Unmodified	_VNLPPELRRQ_					0	0	0		ENST00000582931.5_1_17:16836228-16875389:-|nuORF;nc|ENSG00000240505|O14836-3|TNFRSF13B;ENST00000581616.2_1_17:16844708-16875389:-|nuORF;nc|ENSG00000240505|O14836-2|TNFRSF13B;ENSG00000240505|ENST00000261652|TNFRSF13B	ENST00000582931.5_1_17:16836228-16875389:-|nuORF	ENST00000582931.5_1_17:16836228-16875389:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.35498046875	2	611.356754	1220.69895	-0.40504	-0.00024762	-0.069959	-4.277E-05	-0.475	-0.00029039	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.82886	1	10005	10005		37.812	4.9991	1	12417000			63150	8779	42003	42020	71637	71637					0.09743285928584555
VNLSRHAS	8	Unmodified	_VNLSRHAS_					0	0	0			REV__ENSG00000197442|ENST00000359015|MAP3K5	REV__ENSG00000197442|ENST00000359015|MAP3K5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	442.2408142089844	2	442.240858	882.467164	-1.2774	-0.00056493	1.5151	0.00067003	0.23767	0.00010511	442.2414215612013	81.549	6.8021	81.549	77.636	84.438	0					411	223	3	0	0	0	0.89043	2	7223	7223;7628		42.396	6.4687	1	716910	+		63151	23231	42004	42021	71638;71639	71638					0.021228632976999506
VNLSRHAS	8	Unmodified	_VNLSRHAS_					0	0	0			REV__ENSG00000197442|ENST00000359015|MAP3K5	REV__ENSG00000197442|ENST00000359015|MAP3K5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.2401123046875	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.91977	1	8389	8389		45.952	8.7928	1	1244000	+		63152	23231	42004	42021	71640	71640					0.021228632976999506
VNLTAVLLPLN	11	Unmodified	_VNLTAVLLPLN_					0	0	0		ENSG00000184985|ENST00000507866|SORCS2	ENSG00000184985|ENST00000507866|SORCS2	ENSG00000184985|ENST00000507866|SORCS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	583.8585815429688	2	583.860806	1165.70706	0.86529	0.00050521	-4.0365	-0.0023567	-3.1712	-0.0018515	583.8582639221804	98.476	1.8471	98.633	98.188	100.03	0.15659					108	42	5	0	0	0	0.7144	1	10215	10215		29.17	1.2878	1	894230			63153	7662	42005	42022	71641	71641					0.13083420125371958
VNLTIFTARL	10	Unmodified	_VNLTIFTARL_					0	0	0		ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D;ENSG00000244509|ENST00000361441|APOBEC3C	ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000244509|ENST00000361441|APOBEC3C	ENSG00000244509|ENST00000361441|APOBEC3C	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3450317382812	2	574.345323	1146.67609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.09	1	20.09	19.59	20.59	0								0	0	0	0.45132	1	463	463		24.519	0	1				63154	3540;8823	42006	42023	71642	71642					0.10862266811136578
VNLVFEKIQ	9	Unmodified	_VNLVFEKIQ_					0	0	0		ENSG00000128849|ENST00000281282|CGNL1	ENSG00000128849|ENST00000281282|CGNL1	ENSG00000128849|ENST00000281282|CGNL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3164672851562	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.67345	1	10472	10472		42.396	5.237	1	4868200			63155	3564	42007	42024	71643	71643					0.08222889028479585
VNLVLAVLA	9	Unmodified	_VNLVLAVLA_					0	0	0			REV__nc|ENSG00000172046|O94966|USP19	REV__nc|ENSG00000172046|O94966|USP19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.30096435546875	2	456.299853	910.585153	-1.267	-0.00057813	4.2907	0.0019578	3.0237	0.0013797	456.3016565043114	33.346	1.5471	33.392	33.095	34.642	0.045853					160	67	4	0	0	0	0.77546	1	1652	1652		31.955	6.5047	1	1558600	+		63156	30028	42008	42025	71644	71644					0.12628422833643071
VNLYSGKIITT	11	Unmodified	_VNLYSGKIITT_					0	0	0		nc|ENSG00000115977|Q2M2I8-2|AAK1;ENSG00000115977|ENST00000409085|AAK1	nc|ENSG00000115977|Q2M2I8-2|AAK1	nc|ENSG00000115977|Q2M2I8-2|AAK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.84619140625	2	604.847896	1207.68124	1.0466	0.00063305	-3.8391	-0.0023221	-2.7925	-0.001689	604.845452875801	96.207	3.1756	96.438	95.308	98.483	0.23103					209	74	4	0	0	0	0.7144	1	9872	9872		29.17	1.0886	1	585990			63157	2889	42009	42026	71645	71645					0.08570525883101254
VNMKSLIVQ	9	Unmodified	_VNMKSLIVQ_					0	0	0			REV__ENST00000470400.5_1_3:142720470-142740424:+|nuORF	REV__ENST00000470400.5_1_3:142720470-142740424:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3011474609375	2	516.299527	1030.5845	0.13063	6.7444E-05	1.7671	0.00091234	1.8977	0.00097978	516.3012953413697	57.209	1.6001	57.18	56.732	58.332	-0.028664					105	45	4	0	0	0	0.76764	1	5269	5269		34.173	2.6427	1	661070	+		63158	27211	42010	42027	71646	71646					0.07043260122304673
VNMKSLIVQ	9	Unmodified	_VNMKSLIVQ_					0	0	0			REV__ENST00000470400.5_1_3:142720470-142740424:+|nuORF	REV__ENST00000470400.5_1_3:142720470-142740424:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3013916015625	2	516.299527	1030.5845	-0.58657	-0.00030285	2.6779	0.0013826	2.0913	0.0010798	516.3016574074306	57.099	1.4441	57.132	56.795	58.239	0.033184					114	45	4	0	0	0	0.64555	1	5174	5174		44.377	0	1	705170	+		63159	27211	42010	42027	71647	71647					0.07043260122304673
VNMTLPVDAV	10	Unmodified	_VNMTLPVDAV_					0	0	0		ENSG00000109775|ENST00000264689|UFSP2	ENSG00000109775|ENST00000264689|UFSP2	ENSG00000109775|ENST00000264689|UFSP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7811889648438	2	529.781167	1057.54778	0.4777	0.00025307	-1.0285	-0.00054488	-0.55081	-0.00029181	529.7807050797124	49.497	1.236	49.957	49.582	50.818	0.45983					76	29	5	0	0	0	0.82886	1	4823	4823		37.812	2.1932	1	4861500			63160	2483	42011	42028	71648	71648					0.021309635057150444
VNNKGYLLT	9	Unmodified	_VNNKGYLLT_					0	0	0			REV__ENST00000473458.5_1_22:25240737-25320238:+|nuORF	REV__ENST00000473458.5_1_22:25240737-25320238:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.2835998535156	2	511.287474	1020.5604	-0.92708	-0.000474	-0.33784	-0.00017274	-1.2649	-0.00064674	511.2872429876972	41.91	2.375	41.872	41.45	43.825	-0.038223					133	56	5	0	0	0	0.51307	1	3296	3296		51.335	5.3835	1	7049200	+		63161	21348	42012	42029	71649	71649					0.05093742960275449
VNNSRVFR	8	Unmodified	_VNNSRVFR_					0	0	0			REV__nc|ENSG00000056586|Q9HBD1-6|RC3H2	REV__nc|ENSG00000056586|Q9HBD1-6|RC3H2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	496.2729187011719	2	496.275232	990.535912	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.022	1	23.082	22.582	23.582	0.060431								0	0	0	0.29871	1	740	740		23.042	1.0826	1		+		63162	16421	42013	42030	71650	71650					0.040265275974206816
VNRATQSAKEL	11	Unmodified	_VNRATQSAKEL_					0	0	0		nc|ENSG00000053747|Q16787-3|LAMA3;ENSG00000053747|ENST00000313654|LAMA3;ENST00000586709.1_1_18:21478707-21479460:+|nuORF;nc|ENSG00000053747|Q16787-4|LAMA3;nc|ENSG00000053747|Q16787-1|LAMA3	nc|ENSG00000053747|Q16787-3|LAMA3	nc|ENSG00000053747|Q16787-3|LAMA3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.8375854492188	2	608.835851	1215.65715	5.7403	0.0034949	-3.0664	-0.0018669	2.6739	0.001628	608.8338988848703	110.04	0.64108	110.11	109.94	110.58	0.067993					56	22	4	0	0	0	0.62614	1	13375	13375		41.427	2.1738	1	3727200			63163	1010	42014	42031	71651	71651					0.05794685449427561
VNRFLTVRLVH	11	Unmodified	_VNRFLTVRLVH_					0	0	0		ENST00000568975.5_1_16:68349776-68349857:+|nuORF	ENST00000568975.5_1_16:68349776-68349857:+|nuORF	ENST00000568975.5_1_16:68349776-68349857:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9432678222656	3	451.941973	1352.80409	-0.67633	-0.00030566	3.3865	0.0015305	2.7102	0.0012249	451.94335598806316	53.501	2.9355	53.476	51.367	54.303	-0.024754					205	72	4	0	0	0	0.77205	1	4729	4729		17.167	0	1	765750			63164	13973	42015	42032	71652	71652					0.1417982712500816
VNRIIQKK	8	Unmodified	_VNRIIQKK_					0	0	0		nc|ENSG00000165181|Q5VXU9-3|SHOC1;nc|ENSG00000165181|Q5VXU9|SHOC1;ENSG00000165181|ENST00000682961|SHOC1	nc|ENSG00000165181|Q5VXU9-3|SHOC1	nc|ENSG00000165181|Q5VXU9-3|SHOC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.8255310058594	2	499.827101	997.639649	1.0233	0.00051145	-0.42263	-0.00021124	0.60063	0.00030021	499.8266355697786	19.569	0.38315	19.641	19.479	19.862	0.071129					31	13	3	0	0	0	0.86791	1	411	411		28.254	0	1	67609			63165	15066	42016	42033	71653	71653					0.1407343470508522
VNRKLMKIF	9	Unmodified	_VNRKLMKIF_					0	0	0			REV__ENSG00000233412|ENST00000641450|OR5H15	REV__ENSG00000233412|ENST00000641450|OR5H15	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.3450927734375	2	574.852261	1147.68997	1.0667	0.00061317	3.2348	0.0018596	4.3015	0.0024727	575.3540715066217	99.367	3.0997	99.706	98.378	101.48	0.33968					121	77	2	0	0	0	0.20789	1	11802	11802		45.952	21.749	1	440580	+		63166	23773	42017	42034	71654	71654					0.1220322103856688
VNRRKSKDKS	10	Unmodified	_VNRRKSKDKS_					0	0	0		ENST00000366973.8_1_1:212977695-212977731:+|nuORF	ENST00000366973.8_1_1:212977695-212977731:+|nuORF	ENST00000366973.8_1_1:212977695-212977731:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.7853698730469	3	406.573949	1216.70002	-0.33875	-0.00013773	3.3757	0.0013725	3.037	0.0012348	406.91031283068696	30.358	0.16572	30.311	30.181	30.347	-0.047064					5	3	2	0	0	0	0.37624	1	1638	1638		26.063	14.967	1	7311.5			63167	10524	42018	42035	71655	71655					0.10033500297527098
VNRRKSKDKS	10	Unmodified	_VNRRKSKDKS_					0	0	0		ENST00000366973.8_1_1:212977695-212977731:+|nuORF	ENST00000366973.8_1_1:212977695-212977731:+|nuORF	ENST00000366973.8_1_1:212977695-212977731:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	406.573949	1216.70002	0.015325	6.2308E-06	4.0022	0.0016272	4.0175	0.0016334	406.5755401964605	30.309	0.79622	30.338	29.92	30.716	0.028618	-0.013523	-0.00013985	NaN	26.063	31	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99740			63168	10524	42018	42035							0.10033500297527098
VNRRKSKDKS	10	Unmodified	_VNRRKSKDKS_					0	0	0		ENST00000366973.8_1_1:212977695-212977731:+|nuORF	ENST00000366973.8_1_1:212977695-212977731:+|nuORF	ENST00000366973.8_1_1:212977695-212977731:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	406.573949	1216.70002	0.0091714	3.7288E-06	4.6125	0.0018753	4.6217	0.0018791	406.57552558144835	30.401	0.52541	30.405	30.141	30.667	0.0037212	0.054055	0.00060458	NaN	26.063	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97090			63169	10524	42018	42035							0.10033500297527098
VNRRVNNFGSG	11	Unmodified	_VNRRVNNFGSG_					0	0	0		nc|ENSG00000068366|O60488|ACSL4;ENSG00000068366|ENST00000672401|ACSL4	nc|ENSG00000068366|O60488|ACSL4	nc|ENSG00000068366|O60488|ACSL4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.7853088378906	3	407.214532	1218.62177	0.14943	6.0849E-05	2.544	0.001036	2.6934	0.0010968	407.21530364112886	31.113	0.52825	31.193	30.856	31.384	0.079836					21	11	2	0	0	0	0.17368	1	2067	2067		17.167	0	1	66856			63170	14770	42019	42036	71656	71656					0.021200677122806155
VNRTLGRNVPL	11	Unmodified	_VNRTLGRNVPL_					0	0	0		ENSG00000111752|ENST00000544916|PHC1;ENST00000433847.2_1_12:9067399-9086462:+|nuORF	ENSG00000111752|ENST00000544916|PHC1	ENSG00000111752|ENST00000544916|PHC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8693237304688	2	619.870028	1237.7255	0.85836	0.00053207	-2.0146	-0.0012488	-1.1562	-0.00071672	619.8686410709195	93.975	2.8634	94.136	92.286	95.15	0.16119					249	68	4	0	0	0	0.638	1	9503	9503		40.058	7.3076	1	2724800			63171	2610	42020	42037	71657	71657					0.11614974819940471
VNSMKVKLNG	10	Unmodified	_VNSMKVKLNG_					0	0	0			REV__ENSG00000155275|ENST00000389737|TRMT44	REV__ENSG00000155275|ENST00000389737|TRMT44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	545.3043823242188	2	545.307884	1088.60121	0.47964	0.00026155	-3.7381	-0.0020384	-3.2585	-0.0017769	545.3056882107827	60.04	0.52508	60.157	59.906	60.431	0.11676					25	16	2	0	0	0	0.67571	1	5196	5196		45.972	9.5255	1	109660	+		63172	20420	42021	42038	71658	71658					0.060457610082494284
VNSRIQSKT	9	Unmodified	_VNSRIQSKT_					0	0	0		nc|ENSG00000196628|P15884-15|TCF4;nc|ENSG00000196628|P15884|TCF4;nc|ENSG00000196628|P15884-12|TCF4;nc|ENSG00000196628|P15884-14|TCF4;nc|ENSG00000196628|P15884-10|TCF4;nc|ENSG00000196628|P15884-5|TCF4;nc|ENSG00000196628|P15884-13|TCF4;nc|ENSG00000196628|P15884-4|TCF4;chr18:55585352-55585973|29|14.72|0.64|4.53|-|ENST00000627685|TCF4,TCF4;chr18:55587136-55588470|36|18.83|0.6|4.98|-|ENST00000626595|TCF4,TCF4;ENST00000563686.5_1_18:52937038-53128316:-|nuORF;ENSG00000196628|ENST00000354452|TCF4	nc|ENSG00000196628|P15884-15|TCF4	nc|ENSG00000196628|P15884-15|TCF4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7930908203125	2	516.793455	1031.57236	-1.5587	-0.00080555	1.5478	0.00079991	-0.010905	-5.6357E-06	516.7942040219704	88.319	3.561	88.488	87.307	90.868	0.16923					237	83	4	0	0	0	0.76419	1	8623	8623		35.152	1.6364	1	755180			63173	15186	42022	42039	71659	71659					0.05783359703491442
VNTISEFAF	9	Unmodified	_VNTISEFAF_					0	0	0			REV__ENSG00000140459|ENST00000268053|CYP11A1	REV__ENSG00000140459|ENST00000268053|CYP11A1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.2188720703125	2	514.258382	1026.50221	-0.75033	-0.00038586	-2.6788	-0.0013776	-3.4292	-0.0017635	514.2569314278388	30.386	0.30897	30.414	30.23	30.538	0.028618					11	6	2	0	0	0	0.20789	1	1967	1967		18.324	0	1	44615	+		63174	19618	42023	42040	71660	71660					-0.009979386850091032
VNTLVLVFEAS	11	Unmodified	_VNTLVLVFEAS_					0	0	0		ENST00000397222.2_1_X:45918520-45918886:-|nuORF	ENST00000397222.2_1_X:45918520-45918886:-|nuORF	ENST00000397222.2_1_X:45918520-45918886:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.332763671875	2	596.334621	1190.65469	-1.3013	-0.00077598	-1.6351	-0.00097509	-2.9364	-0.0017511	596.3335316328556	96.129	3.5172	96.331	95.353	98.87	0.20242					227	81	4	0	0	0	0.65746	1	9878	9878		37.812	2.6595	1	1353000			63175	11141	42024	42041	71661	71661					0.06698836991768076
VNTLVLVFEAS	11	Unmodified	_VNTLVLVFEAS_					0	0	0		ENST00000397222.2_1_X:45918520-45918886:-|nuORF	ENST00000397222.2_1_X:45918520-45918886:-|nuORF	ENST00000397222.2_1_X:45918520-45918886:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.3322143554688	2	596.334621	1190.65469	0.54724	0.00032634	-3.2869	-0.0019601	-2.7397	-0.0016338	596.3325172883492	95.985	3.4694	96.39	95.216	98.686	0.40451					232	84	4	0	0	0	0.62614	1	11553	11553		41.427	1.3684	1	1225200			63176	11141	42024	42041	71662	71662					0.06698836991768076
VNTPQSRIQN	10	Unmodified	_VNTPQSRIQN_					0	0	0		nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L;ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L	nc|ENSG00000121210|A2VDJ0-2|TMEM131L	nc|ENSG00000121210|A2VDJ0-2|TMEM131L	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	578.806396484375	2	578.807094	1155.59963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.72	1	110.84	110.34	111.34	0.11659								0	0	0	0.45132	1	11921	11921		24.519	0.28737	1				63177	3169	42025	42042	71663	71663					0.028058432438683667
VNVLGFLKH	9	Unmodified	_VNVLGFLKH_					0	0	0		nc|ENSG00000144724|P23470-2|PTPRG;ENSG00000144724|ENST00000474889|PTPRG;ENST00000475012.5_1_3:62203523-62278979:+|nuORF	nc|ENSG00000144724|P23470-2|PTPRG	nc|ENSG00000144724|P23470-2|PTPRG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.809814453125	2	513.808377	1025.6022	0.090877	4.6693E-05	1.0576	0.00054341	1.1485	0.00059011	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.7932	1	4333	4333		21.96	0	1	1448700			63178	4728	42026	42043	71664	71664					0.0904234343945518
VPAATLCPLPF	11	Unmodified	_VPAATLCPLPF_					0	0	0			REV__ENST00000593431.1_1_19:50016657-50028245:+|nuORF	REV__ENST00000593431.1_1_19:50016657-50028245:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	564.8117065429688	2	564.809728	1127.6049	0.3799	0.00021457	2.7594	0.0015585	3.1393	0.0017731	564.8113814777386	46.862	0.53256	46.9	46.654	47.186	0.038181					22	13	2	0	0	0	0.66312	1	3485	3485		37.159	0	1	295160	+		63179	26896	42027	42044	71665	71665					0.04620430782074436
VPAATLCPLPF	11	Unmodified	_VPAATLCPLPF_					0	0	0			REV__ENST00000593431.1_1_19:50016657-50028245:+|nuORF	REV__ENST00000593431.1_1_19:50016657-50028245:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	564.809728	1127.6049	-0.58602	-0.00033099	3.1752	0.0017934	2.5892	0.0014624	564.811475637503	46.831	0.54904	46.802	46.592	47.141	-0.028782	-0.077344	-0.00018494	NaN	37.159	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82322	+		63180	26896	42027	42044							0.04620430782074436
VPAATLCPLPF	11	Unmodified	_VPAATLCPLPF_					0	0	0			REV__ENST00000593431.1_1_19:50016657-50028245:+|nuORF	REV__ENST00000593431.1_1_19:50016657-50028245:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	564.809728	1127.6049	0.57542	0.00032501	2.5596	0.0014457	3.135	0.0017707	564.8112836680787	46.958	0.52637	46.954	46.637	47.163	-0.0041618	0.07402	-0.00088037	NaN	37.159	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142390	+		63181	26896	42027	42044							0.04620430782074436
VPAATLCPLPF	11	Unmodified	_VPAATLCPLPF_					0	0	0			REV__ENST00000593431.1_1_19:50016657-50028245:+|nuORF	REV__ENST00000593431.1_1_19:50016657-50028245:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	564.809728	1127.6049	0.3609	0.00020384	3.0173	0.0017042	3.3782	0.0019081	564.8113401036301	46.866	0.63782	46.885	46.565	47.203	0.018967	0.005603	-0.00036327	NaN	37.159	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	251190	+		63182	26896	42027	42044							0.04620430782074436
VPAFLKHIA	9	Unmodified	_VPAFLKHIA_					0	0	0			REV__ENST00000445714.1_1_10:27638689-27639127:-|nuORF	REV__ENST00000445714.1_1_10:27638689-27639127:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.3036804199219	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.451	1	51.485	50.985	51.985	0.034588								0	0	0	0.31472	1	4098	4098		25.45	2.4077	1		+		63183	18556	42028	42045	71666	71666					0.09887244927790562
VPAGDDTY	8	Unmodified	_VPAGDDTY_					0	0	0		nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1;nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1;ENSG00000088827|ENST00000344754|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.1838073730469	2	419.184883	836.355213	-0.61734	-0.00025878	-3.4208	-0.0014339	-4.0381	-0.0016927	419.18379974001596	92.26	1.9431	92.723	91.934	93.877	0.46249					113	45	4	0	0	0	0.88915	1	11014	11014		35.201	0	1	2961200			63184	14795	42029	42046	71667	71667					-0.06951035569954911
VPAILPSSQ	9	Unmodified	_VPAILPSSQ_					0	0	0			REV__nc|ENSG00000186583|Q76KD6-2|SPATC1	REV__nc|ENSG00000186583|Q76KD6-2|SPATC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.76873779296875	2	456.263468	910.512382	-0.53185	-0.00024267	0.33705	0.00015378	-0.19481	-8.8884E-05	456.2639136811204	60.524	0.36538	61.077	60.855	61.22	0.55323					15	9	2	0	0	0	0.7932	1	6448	6448		24.203	4.8428	1	205140	+		63185	22866	42030	42047	71668	71668					0.053546690402299646
VPAILPSSQ	9	Unmodified	_VPAILPSSQ_					0	0	0			REV__nc|ENSG00000186583|Q76KD6-2|SPATC1	REV__nc|ENSG00000186583|Q76KD6-2|SPATC1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	456.263468	910.512382	-1.4898	-0.00067974	1.9924	0.00090907	0.50262	0.00022933	456.26438460140037	60.655	0.42645	61.044	60.753	61.18	0.38945	-0.016329	0.00031601	NaN	24.203	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185400	+		63186	22866	42030	42047							0.053546690402299646
VPAILPSSQ	9	Unmodified	_VPAILPSSQ_					0	0	0			REV__nc|ENSG00000186583|Q76KD6-2|SPATC1	REV__nc|ENSG00000186583|Q76KD6-2|SPATC1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	456.263468	910.512382	-0.53185	-0.00024267	0.33705	0.00015378	-0.19481	-8.8884E-05	456.2639136811204	60.524	0.36538	61.077	60.855	61.22	0.55323	0.016329	-0.0011946	NaN	24.203	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	205140	+		63187	22866	42030	42047							0.053546690402299646
VPAITAFLQ	9	Unmodified	_VPAITAFLQ_					0	0	0		ENST00000504764.5_2_2:160710914-160710968:-|nuORF	ENST00000504764.5_2_2:160710914-160710968:-|nuORF	ENST00000504764.5_2_2:160710914-160710968:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.28082275390625	2	480.28166	958.548768	0.7717	0.00037063	-2.4741	-0.0011882	-1.7024	-0.00081761	480.2803620353023	99.435	0.88804	99.592	99.235	100.12	0.15659					37	20	2	0	0	0	0.78536	1	10371	10371		29.15	0	1	335910			63188	12911	42031	42048	71669	71669					0.06783545936934843
VPAITAFLQ	9	Unmodified	_VPAITAFLQ_					0	0	0		ENST00000504764.5_2_2:160710914-160710968:-|nuORF	ENST00000504764.5_2_2:160710914-160710968:-|nuORF	ENST00000504764.5_2_2:160710914-160710968:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.2810974121094	2	480.28166	958.548768	-1.6792	-0.00080648	0.10573	5.078E-05	-1.5735	-0.0007557	480.2815170971303	99.526	0.96476	99.712	99.198	100.16	0.18582					47	22	3	0	0	0	0.74721	1	10306	10306		37.159	4.3467	1	356250			63189	12911	42031	42048	71670	71670					0.06783545936934843
VPAITAFLQ	9	Unmodified	_VPAITAFLQ_					0	0	0		ENST00000504764.5_2_2:160710914-160710968:-|nuORF	ENST00000504764.5_2_2:160710914-160710968:-|nuORF	ENST00000504764.5_2_2:160710914-160710968:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.28131103515625	2	480.28166	958.548768	2.0772	0.00099766	-3.5987	-0.0017284	-1.5215	-0.00073073	480.27979970211794	99.254	1.495	99.616	99.254	100.75	0.36136					97	37	4	0	0	0	0.74721	1	11998	11998		37.159	0	1	8902700			63190	12911	42031	42048	71671	71671					0.06783545936934843
VPAKCPII	8	Unmodified	_VPAKCPII_					0	0	0			REV__ENST00000463727.1_1_10:129868414-129869560:+|nuORF	REV__ENST00000463727.1_1_10:129868414-129869560:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.7555847167969	2	420.754224	839.493896	-0.39386	-0.00016572	2.8186	0.0011859	2.4247	0.0010202	420.7553186920564	20.988	1.6049	20.924	19.96	21.565	-0.064743					109	65	2	0	0	0	0.86288	1	565	565		26.796	7.4361	1	83540	+		63191	27081	42032	42049	71672	71672					0.06772835864671833
VPALRQLH	8	Unmodified	_VPALRQLH_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.2331237792969	2	467.285069	932.555585	-0.43064	-0.00020123	2.2839	0.0010672	1.8533	0.000866	467.2871243044304	66.649	0.16942	67.2	67.111	67.281	0.55071					8	5	2	0	0	0	0.4196	1	7298	7298		29.842	10.482	1	71637			63192	5684	42033	42050	71673	71673					0.08660903608165427
VPALSNHL	8	Unmodified	_VPALSNHL_					0	0	0		ENST00000496359.5_1_10:81565841-81574436:-|nuORF	ENST00000496359.5_1_10:81565841-81574436:-|nuORF	ENST00000496359.5_1_10:81565841-81574436:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	425.74176025390625	2	425.742702	849.470852	0.29663	0.00012629	-1.598	-0.00068035	-1.3014	-0.00055406	425.741911470863	78.079	1.7968	78.484	77.977	79.774	0.40531					74	42	3	0	0	0	0.88915	1	8907	8907		35.201	0	1	2442800			63193	12783	42034	42051	71674	71674					0.04009533071553051
VPAPKPEPVSL	11	Unmodified	_VPAPKPEPVSL_					0	0	0		nc|ENSG00000175727|Q9HAP2-3|MLXIP;ENSG00000175727|ENST00000319080|MLXIP;ENST00000541750.1_12:122618368-122620257:+|nuORF;nc|ENSG00000175727|Q9HAP2-5|MLXIP;nc|ENSG00000175727|Q9HAP2-4|MLXIP;nc|ENSG00000175727|Q9HAP2-2|MLXIP	nc|ENSG00000175727|Q9HAP2-3|MLXIP	nc|ENSG00000175727|Q9HAP2-3|MLXIP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3304443359375	2	567.331882	1132.64921	0.77491	0.00043963	-4.0071	-0.0022734	-3.2322	-0.0018337	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.80784	1	9188	9188		9.7057	1.4744	1	6344600			63194	7032	42035	42052	71675	71675					0.0881915819995811
VPAPPIFAR	9	Unmodified	_VPAPPIFAR_					0	0	0			REV__ENST00000509697.1_1_4:1164106-1164795:-|nuORF	REV__ENST00000509697.1_1_4:1164106-1164795:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.71820068359375	2	484.28982	966.565087	-0.73515	-0.00035603	-0.78418	-0.00037977	-1.5193	-0.00073579	484.29068834155777	98.289	0.7123	98.517	98.214	98.927	0.22787					25	15	2	0	0	0	0.20789	1	10232	10232		30.504	0	1	40043	+		63195	20674	42036	42053	71676	71676					0.08046671893691837
VPARIRVLRE	10	Unmodified	_VPARIRVLRE_					0	0	0		nc|ENSG00000290746|Q8WTZ4|CA5BP1;ENST00000380334.6_1_X:15706900-15721312:+|nuORF	nc|ENSG00000290746|Q8WTZ4|CA5BP1	nc|ENSG00000290746|Q8WTZ4|CA5BP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.8828735351562	2	604.882939	1207.75132	-0.095069	-5.7506E-05	-0.55042	-0.00033294	-0.64549	-0.00039045	604.8824032869608	103.42	1.102	103.46	103.07	104.17	0.041481					68	26	4	0	0	0	0.86272	1	11200	11200		24.519	3.5723	1	878690			63196	10920	42037	42054	71677	71677					0.155758690622406
VPARKNPN	8	Unmodified	_VPARKNPN_					0	0	0			REV__ENSG00000249693|ENST00000512175|THEGL	REV__ENSG00000249693|ENST00000512175|THEGL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.2587585449219	2	448.259051	894.503549	-0.14447	-6.4758E-05	0.22166	9.9363E-05	0.077198	3.4605E-05	448.2590229245312	90.101	3.0472	90.17	88.225	91.272	0.068695					215	72	5	0	0	0	0.85277	1	9226	9226		25.45	1.2474	1	2722700	+		63197	23867	42038	42055	71678	71678					0.05207740194418875
VPARRWKEF	9	Unmodified	_VPARRWKEF_					0	0	0		ENST00000473343.5_1_1:6521496-6523040:-|nuORF;nc|ENSG00000215788|Q93038-8|TNFRSF25;nc|ENSG00000215788|Q93038-9|TNFRSF25;nc|ENSG00000215788|Q93038-10|TNFRSF25;ENSG00000215788|ENST00000356876|TNFRSF25;nc|ENSG00000215788|Q93038-2|TNFRSF25;nc|ENSG00000215788|Q93038-11|TNFRSF25	ENST00000473343.5_1_1:6521496-6523040:-|nuORF	ENST00000473343.5_1_1:6521496-6523040:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	594.8367919921875	2	594.835457	1187.65636	0.61313	0.00036471	3.7637	0.0022388	4.3769	0.0026035	594.837618327118	69.506	0.42471	69.635	69.361	69.786	0.1291					32	20	2	0	0	0	0.76255	1	6304	6304		35.618	5.7767	1	1008500			63198	8654	42039	42056	71679	71679					0.07003935591023946
VPASDDGY	8	Unmodified	_VPASDDGY_					0	0	0		nc|ENSG00000213005|Q9NZH4|PTTG3P	nc|ENSG00000213005|Q9NZH4|PTTG3P	nc|ENSG00000213005|Q9NZH4|PTTG3P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.1756286621094	2	412.177058	822.339563	-1.9151	-0.00078935	-2.2103	-0.00091105	-4.1254	-0.0017004	412.1764543351216	94.772	2.5614	94.974	94.403	96.965	0.20242					141	60	6	0	0	0	0.87276	1	9681	9681		29.842	4.3914	1	13873000			63199	15247	42040	42057	71680	71680					-0.07871322086998589
VPASLPVEF	9	Unmodified	_VPASLPVEF_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.7656555175781	2	479.765843	957.517133	0.362	0.00017367	-0.42141	-0.00020218	-0.059411	-2.8503E-05	479.76554242222454	80.347	1.3373	80.767	80.171	81.508	0.41948					69	31	3	0	0	0	0.080198	6	9230	9206;9218;9230;9242;9254;9267		97.473	34.494	1	4919900			63200	8114	42041	42058	71681;71682;71683;71684;71685;71686	71683					0.03667553182992833
VPASLPVEF	9	Unmodified	_VPASLPVEF_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.765380859375	2	479.765843	957.517133	-0.7446	-0.00035723	0.67391	0.00032332	-0.070684	-3.3912E-05	479.76609977021917	80.277	1.2892	80.803	80.317	81.607	0.52676					70	30	4	0	0	0	0.080198	3	9262	9227;9250;9262		97.473	34.166	1	5775600			63201	8114	42041	42058	71687;71688;71689	71689					0.03667553182992833
VPATPVKR	8	Unmodified	_VPATPVKR_					0	0	0		ENSG00000181826|ENST00000454158|RELL1	ENSG00000181826|ENST00000454158|RELL1	ENSG00000181826|ENST00000454158|RELL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2519836425781	2	434.27417	866.533787	-0.26153	-0.00011357	-0.51272	-0.00022266	-0.77425	-0.00033624	434.27363287775427	79.503	1.7384	79.919	79.02	80.758	0.41621					64	40	3	0	0	0	0.4196	1	9098	9098		47.916	7.343	1	1223400			63202	7407	42042	42059	71690	71690					0.09518098859598467
VPATSLCLW	9	Unmodified	_VPATSLCLW_					0	0	0		ENST00000296575.7_1_4:145567307-145567847:+|nuORF	ENST00000296575.7_1_4:145567307-145567847:+|nuORF	ENST00000296575.7_1_4:145567307-145567847:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.2594909667969	2	495.259871	988.505189	1.1508	0.00056992	-0.80172	-0.00039706	0.34904	0.00017287	495.25942474109837	34.846	1.7928	35.227	34.977	36.77	0.3812					108	45	3	0	0	0	0.7932	1	2729	2729		26.796	0.10319	1	3842700			63203	9743	42043	42060	71691	71691					0.010476131681343759
VPAVKHPG	8	Unmodified	_VPAVKHPG_					0	0	0			REV__ENSG00000155875|ENST00000380534|SAXO1	REV__ENSG00000155875|ENST00000380534|SAXO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.7396240234375	2	402.739963	803.465373	1.7818	0.00071759	-2.1753	-0.00087608	-0.39351	-0.00015848	402.73894017753986	35.084	1.5442	35.331	34.892	36.436	0.2477					98	39	3	0	0	0	0.82464	1	2655	2655		21.702	0	1	629910	+		63204	20450	42044	42061	71692	71692					0.05577854279761141
VPAVPETL	8	Unmodified	_VPAVPETL_					0	0	0		ENSG00000147604|ENST00000352983|RPL7	ENSG00000147604|ENST00000352983|RPL7	ENSG00000147604|ENST00000352983|RPL7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.23736572265625	2	413.239461	824.46437	-1.33	-0.0005496	-1.1028	-0.00045573	-2.4328	-0.0010053	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.86288	1	7289	7289		26.796	3.7594	1	895630			63205	4914	42045	42062	71693	71693					0.04511595120197853
VPAVPLSQLH	10	Unmodified	_VPAVPLSQLH_					0	0	0		nc|ENSG00000144057|Q96JF0-2|ST6GAL2;ENSG00000144057|ENST00000409382|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8101806640625	2	530.811116	1059.60768	1.9903	0.0010565	-3.4824	-0.0018485	-1.4921	-0.00079202	530.8091393249302	98.15	1.1454	98.536	98.015	99.161	0.38548					61	23	4	0	0	0	0.37206	2	11803	11803;11814		66.429	9.7082	1	1598900			63206	4686	42046	42063	71694;71695	71694					0.08026022231297247
VPAVPLSQLH	10	Unmodified	_VPAVPLSQLH_					0	0	0		nc|ENSG00000144057|Q96JF0-2|ST6GAL2;ENSG00000144057|ENST00000409382|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.8104248046875	2	530.811116	1059.60768	1.4098	0.00074832	-2.9191	-0.0015495	-1.5094	-0.00080119	530.8094640978223	98.257	0.82304	98.634	98.205	99.028	0.37679					58	19	4	0	0	0	0.37206	1	11866	11866		66.429	3.4509	1	1548000			63207	4686	42046	42063	71696	71696					0.08026022231297247
VPAVPLSQLH	10	Unmodified	_VPAVPLSQLH_					0	0	0		nc|ENSG00000144057|Q96JF0-2|ST6GAL2;ENSG00000144057|ENST00000409382|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	530.811116	1059.60768	-0.033527	-1.7796E-05	-1.6421	-0.00087163	-1.6756	-0.00088943	530.8101199078525	98.159	0.43657	98.216	97.965	98.402	0.056831	-0.19682	0.0013818	NaN	66.429	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54765			63208	4686	42046	42063							0.08026022231297247
VPAVPLSQLH	10	Unmodified	_VPAVPLSQLH_					0	0	0		nc|ENSG00000144057|Q96JF0-2|ST6GAL2;ENSG00000144057|ENST00000409382|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	530.811116	1059.60768	-0.048286	-2.5631E-05	-1.2455	-0.00066112	-1.2938	-0.00068675	530.8102741889877	98.074	1.378	98.301	97.327	98.705	0.22787	-0.11114	0.0018028	NaN	66.429	43	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85246			63209	4686	42046	42063							0.08026022231297247
VPAVPLSQLH	10	Unmodified	_VPAVPLSQLH_					0	0	0		nc|ENSG00000144057|Q96JF0-2|ST6GAL2;ENSG00000144057|ENST00000409382|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	530.811116	1059.60768	0.81006	0.00042999	-2.0679	-0.0010977	-1.2579	-0.0006677	530.8097768025355	98.215	0.75832	98.376	98.06	98.818	0.16073	-0.036724	0.00092964	NaN	66.429	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65093			63210	4686	42046	42063							0.08026022231297247
VPCGQGCGR	9	Unmodified	_VPCGQGCGR_					0	0	0		chr6:31806121-31806755|46|16.17|1.0|4.02|-|2|LSM2,LSM2|1;ENST00000375661.5_1_6:31773857-31774592:-|nuORF	chr6:31806121-31806755|46|16.17|1.0|4.02|-|2|LSM2,LSM2|1	chr6:31806121-31806755|46|16.17|1.0|4.02|-|2|LSM2,LSM2|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.25836181640625	2	438.694372	875.374191	1.5098	0.00066235	2.4978	0.0010958	4.0076	0.0017581	438.69496727487655	30.504	0.14592	30.489	30.401	30.547	-0.015167					4	3	2	0	0	0	0.20789	1	1609	1609		37.159	19.794	1	8993.1			63211	476	42047	42064	71697	71697					-0.06848100751528818
VPDEKLTW	8	Unmodified	_VPDEKLTW_					0	0	0			REV__ENST00000584041.1_1_17:62152499-62207458:-|nuORF	REV__ENST00000584041.1_1_17:62152499-62207458:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.26031494140625	2	494.260925	986.507297	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.734	1	40.739	40.239	41.239	0.0043983								0	0	0	0.30609	1	2607	2607		44.531	2.1349	1		+		63212	22288	42048	42065	71698	71698					0.01350365177609092
VPDEKLTW	8	Unmodified	_VPDEKLTW_					0	0	0			REV__ENST00000584041.1_1_17:62152499-62207458:-|nuORF	REV__ENST00000584041.1_1_17:62152499-62207458:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.2620544433594	2	494.260925	986.507297	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.568	1	40.52	40.02	41.02	-0.04789								0	0	0	0.30609	1	2580	2580		44.531	8.9128	1		+		63213	22288	42048	42065	71699	71699					0.01350365177609092
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.236328125	2	484.235242	966.45593	-0.090812	-4.3974E-05	2.0414	0.00098853	1.9506	0.00094456	484.23629485715105	85.756	1.1553	85.823	85.466	86.622	0.067261					89	26	5	0	0	0	0.9295	1	8595	8595		55.504	5.4797	1	4298800	+		63214	25994	42049	42066	71700	71700					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	484.2363586425781	2	484.235242	966.45593	0.95992	0.00046483	1.1273	0.0005459	2.0873	0.0010107	484.2358049256192	85.92	1.1941	85.847	85.495	86.689	-0.073761					90	27	5	0	0	0	0.92973	1	8861	8861		50.025	9.4519	1	3982900	+		63215	25994	42049	42066	71701	71701					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.2363586425781	2	484.235242	966.45593	-0.75871	-0.00036739	2.9322	0.0014199	2.1734	0.0010525	484.2367477050762	85.41	1.1411	85.595	85.231	86.372	0.18523					85	26	5	0	0	0	0.84634	3	8374	8306;8350;8374		60.294	4.9543	1	7171700	+		63216	25994	42049	42066	71702;71703;71704	71704					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.2362976074219	2	484.235242	966.45593	-0.75652	-0.00036633	1.8777	0.00090925	1.1212	0.00054292	484.23644502490174	86.636	1.0537	86.83	86.094	87.148	0.19379					82	24	5	0	0	0	0.73851	1	8550	8550		65.803	7.0212	1	4414800	+		63217	25994	42049	42066	71705	71705					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	484.2379150390625	2	484.235242	966.45593	0.65008	0.00031479	1.6466	0.00079733	2.2967	0.0011121	484.23610614821564	85.519	1.189	85.667	85.254	86.442	0.14857					84	27	5	0	0	0	0.84634	2	8360	8339;8360		60.294	10.269	1	7052700	+		63218	25994	42049	42066	71706;71707	71707					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.2361755371094	2	484.235242	966.45593	-1.5617	-0.00075625	3.3216	0.0016084	1.7598	0.00085217	484.2368161920654	85.001	0.56653	85.15	84.753	85.32	0.14952					43	12	4	0	0	0	0.91005	1	8247	8247		42.474	0.078325	1	1708900	+		63219	25994	42049	42066	71708	71708					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.23651123046875	2	484.235242	966.45593	-1.5815	-0.0007658	3.8906	0.0018839	2.3091	0.0011181	484.23719885944524	85.495	1.1033	85.654	85.329	86.432	0.15851					89	25	5	0	0	0	0.84634	1	8302	8302		60.294	4.7898	1	6888300	+		63220	25994	42049	42066	71709	71709					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	484.2359924316406	2	484.235242	966.45593	-1.6458	-0.00079696	3.5909	0.0017388	1.9451	0.00094188	484.2369070746642	87.276	1.0738	87.441	87.216	88.289	0.16473					45	24	2	0	0	0	0.91005	1	8574	8574		42.474	1.6963	1	1275000	+		63221	25994	42049	42066	71710	71710					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.23614501953125	2	484.235242	966.45593	-0.10809	-5.2342E-05	0.70974	0.00034368	0.60165	0.00029134	484.2359966972615	84.849	1.21	85.289	84.903	86.113	0.43967					128	29	6	0	0	0	0.84634	1	9931	9931		60.294	10.269	1	48653000	+		63222	25994	42049	42066	71711	71711					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2359619140625	2	484.235242	966.45593	0.22337	0.00010816	0.53431	0.00025873	0.75767	0.00036689	484.2359214945001	86.186	1.2292	86.629	86.074	87.303	0.44331					103	29	6	0	0	0	0.92973	1	10117	10117		50.025	0	1	37343000	+		63223	25994	42049	42066	71712	71712					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.2362365722656	2	484.235242	966.45593	0.39552	0.00019152	1.1289	0.00054667	1.5245	0.0007382	484.23583864352696	86.77	1.4541	87.217	86.978	88.432	0.44629					87	34	4	0	0	0	0.91005	1	10189	10189		42.474	1.6963	1	8816400	+		63224	25994	42049	42066	71713	71713					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23602294921875	2	484.235242	966.45593	-0.53754	-0.00026029	1.2282	0.00059475	0.69069	0.00033445	484.2362894528465	84.849	1.2824	85.296	84.912	86.194	0.44736					130	31	5	0	0	0	0.92973	1	9940	9940		50.025	0	1	48085000	+		63225	25994	42049	42066	71714	71714					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23614501953125	2	484.235242	966.45593	-0.88513	-0.00042861	1.666	0.00080673	0.78085	0.00037812	484.23648902418813	86.261	1.1049	86.715	86.159	87.264	0.45429					90	26	5	0	0	0	0.84634	2	10138	10126;10138		60.294	6.9425	1	35198000	+		63226	25994	42049	42066	71715;71716	71716					-0.028639587964335078
VPDLWSNH	8	Unmodified	_VPDLWSNH_					0	0	0			REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	REV__ENST00000389341.9_1_19:42594034-42594316:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2362976074219	2	484.235242	966.45593	-1.0641	-0.00051528	2.6228	0.0012701	1.5587	0.00075477	484.2366198797029	86.871	1.6056	87.325	87.019	88.625	0.45429					96	38	4	0	0	0	0.9295	1	10222	10222		55.504	7.5886	1	9271700	+		63227	25994	42049	42066	71717	71717					-0.028639587964335078
VPDQDTAIRVF	11	Unmodified	_VPDQDTAIRVF_					0	0	0		nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	nc|ENSG00000211899|P01871-1|IGHM	nc|ENSG00000211899|P01871-1|IGHM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	630.8316040039062	2	630.832777	1259.651	-0.66142	-0.00041725	0.23185	0.00014626	-0.42957	-0.00027099	630.8327702934129	61.027	1.5557	61.416	61.067	62.623	0.38945					100	41	3	0	0	0	0.00085052	8	6482	6482;6493;6515;6524;6534;6544;6556;6582		120.27	72.313	1	1458500			63228	15242	42050	42067	71718;71719;71720;71721;71722;71723;71724;71725	71718					0.03156167217866823
VPDQDTAIRVF	11	Unmodified	_VPDQDTAIRVF_					0	0	0		nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM	nc|ENSG00000211899|P01871-1|IGHM	nc|ENSG00000211899|P01871-1|IGHM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	630.8338012695312	2	630.832777	1259.651	0.66995	0.00042263	-1.2923	-0.00081523	-0.62235	-0.0003926	630.8318230925483	60.928	1.5314	61.481	61.07	62.602	0.55355					91	41	3	0	0	0	0.0037637	7	6536	6486;6511;6521;6528;6536;6548;6560		115.23	49.767	1	1114600			63229	15242	42050	42067	71726;71727;71728;71729;71730;71731;71732	71730					0.03156167217866823
VPDSSGPERIL	11	Unmodified	_VPDSSGPERIL_					0	0	0		nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK;ENSG00000165119|ENST00000376263|HNRNPK	nc|ENSG00000165119|P61978-3|HNRNPK	nc|ENSG00000165119|P61978-3|HNRNPK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.3114013671875	2	585.311677	1168.6088	-1.4138	-0.00082753	1.2237	0.00071627	-0.19009	-0.00011126	585.3122548474907	48.668	1.576	49.136	48.465	50.041	0.46839					149	38	7	0	0	0	0.0039961	12	4682	4659;4670;4682;4693;4705;4717;4730;4742;4757;4771;4784;4803		114.86	46.071	1	3841300			63230	6049	42051	42068	71733;71734;71735;71736;71737;71738;71739;71740;71741;71742;71743;71744	71735					0.031241918095247456
VPDSSGPERIL	11	Unmodified	_VPDSSGPERIL_					0	0	0		nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK;ENSG00000165119|ENST00000376263|HNRNPK	nc|ENSG00000165119|P61978-3|HNRNPK	nc|ENSG00000165119|P61978-3|HNRNPK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	585.3115844726562	2	585.311677	1168.6088	-0.18112	-0.00010601	-0.20992	-0.00012287	-0.39105	-0.00022888	585.3115308794441	48.461	1.6488	49.365	48.805	50.454	0.90424					119	40	5	0	0	0	0.025812	11	4711	4653;4665;4676;4688;4699;4711;4723;4735;4747;4762;4775		106.88	43.216	1	3481100			63231	6049	42051	42068	71745;71746;71747;71748;71749;71750;71751;71752;71753;71754;71755	71750					0.031241918095247456
VPEANSEP	8	Unmodified	_VPEANSEP_					0	0	0		nc|ENSG00000138162|O95359-3|TACC2;ENSG00000138162|ENST00000369005|TACC2	nc|ENSG00000138162|O95359-3|TACC2	nc|ENSG00000138162|O95359-3|TACC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.6989440917969	2	421.698158	841.381762	-0.10365	-4.371E-05	0.82832	0.0003493	0.72467	0.00030559	421.69832178449064	58.379	0.65961	58.349	58.103	58.762	-0.030888					28	19	2	0	0	0	0.90523	1	5439	5439		40.778	0	1	87023			63232	4278	42052	42069	71756	71756					-0.0452734667861705
VPEDDEHK	8	Unmodified	_VPEDDEHK_					0	0	0			REV__ENSG00000121741|ENST00000610343|ZMYM2	REV__ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.7176513671875	2	484.719621	967.42469	-0.72919	-0.00035345	-1.9303	-0.00093564	-2.6595	-0.0012891	484.7185522686156	98.602	4.243	98.83	95.547	99.79	0.22787					182	99	2	0	0	0	0.87922	1	10310	10310		31.955	1.4512	1	545110	+		63233	18464	42053	42070	71757	71757					-0.06032576621191765
VPEDTYGG	8	Unmodified	_VPEDTYGG_					0	0	0			REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF;REV__ENSG00000157680|ENST00000614521|DGKI	REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.1842956542969	2	419.184883	836.355213	-1.7869	-0.00074903	-1.8192	-0.00076256	-3.606	-0.0015116	419.1843260040602	87.259	0.73129	87.461	87.112	87.843	0.20115					34	16	3	0	0	0	0.86288	1	8606	8606		26.796	1.3459	1	593320	+		63234	20148;20558	42054	42071	71758	71758					-0.06951035569932174
VPEDTYGG	8	Unmodified	_VPEDTYGG_					0	0	0			REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF;REV__ENSG00000157680|ENST00000614521|DGKI	REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	419.184883	836.355213	-0.18709	-7.8424E-05	-2.4109	-0.0010106	-2.598	-0.001089	419.1837864339994	87.604	0.82244	87.672	87.357	88.18	0.067711	0.11275	0.00044378	NaN	26.796	36	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	284330	+		63235	20148;20558	42054	42071							-0.06951035569932174
VPEDTYGG	8	Unmodified	_VPEDTYGG_					0	0	0			REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF;REV__ENSG00000157680|ENST00000614521|DGKI	REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	419.184883	836.355213	3.034	0.0012718	-5.6167	-0.0023544	-2.5826	-0.0010826	419.18251937578117	87.567	0.81946	87.62	87.299	88.118	0.053032	0.060614	-0.0022439	NaN	26.796	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	279530	+		63236	20148;20558	42054	42071							-0.06951035569932174
VPEDTYGG	8	Unmodified	_VPEDTYGG_					0	0	0			REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF;REV__ENSG00000157680|ENST00000614521|DGKI	REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	419.184883	836.355213	-1.7869	-0.00074903	-1.8192	-0.00076256	-3.606	-0.0015116	419.1843260040602	87.259	0.73129	87.461	87.112	87.843	0.20115	-0.09838	0.00093985	NaN	26.796	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	593320	+		63237	20148;20558	42054	42071							-0.06951035569932174
VPEEGGYS	8	Unmodified	_VPEEGGYS_					0	0	0			REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.1845703125	2	419.184883	836.355213	-1.8892	-0.00079194	-1.185	-0.00049672	-3.0742	-0.0012887	419.1843404237986	100.11	1.0511	100.28	99.803	100.85	0.172					47	23	3	0	0	0	0.884	1	10377	10377		33.516	6.7195	1	376750	+		63238	18774	42055	42072	71759	71759					-0.06951035569932174
VPEIIPIFLI	10	Unmodified	_VPEIIPIFLI_					0	0	0		ENSG00000198796|ENST00000361673|ALPK2	ENSG00000198796|ENST00000361673|ALPK2	ENSG00000198796|ENST00000361673|ALPK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	577.3672485351562	2	577.365193	1152.71583	0.87834	0.00050713	1.28	0.00073902	2.1583	0.0012461	577.3658132315567	102.16	3.1638	102.3	101.85	105.01	0.13522					236	78	5	0	0	0	0.85939	1	10940	10940		23.042	5.6775	1	15036000			63239	8337	42056	42073	71760	71760					0.1455839376185395
VPEIKTIL	8	Unmodified	_VPEIKTIL_					0	0	0		ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.792724609375	2	456.791861	911.569169	-1.2516	-0.0005717	4.1535	0.0018973	2.9019	0.0013256	456.7936304493402	37.846	1.122	37.863	37.475	38.597	0.016563					101	34	4	0	0	0	0.86288	1	2166	2166		26.796	0	1	1324300			63240	1521	42057	42074	71761	71761					0.10984716596760791
VPELGIWPL	9	Unmodified	_VPELGIWPL_					0	0	0			REV__ENST00000452918.6_2_19:19104437-19104488:-|nuORF	REV__ENST00000452918.6_2_19:19104437-19104488:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.853271484375	2	512.29731	1022.58007	-0.17955	-9.1982E-05	0.30981	0.00015871	0.13026	6.6732E-05	512.2972830901192	60.023	0.3694	60.576	60.319	60.688	0.55323					12	9	2	0	0	0	0.20789	1	6342	6342		33.516	5.6333	1	159760	+		63241	26907	42058	42075	71762	71762					0.0696811897103089
VPESSLAGHSF	11	Unmodified	_VPESSLAGHSF_					0	0	0		nc|ENSG00000184900|P55854-2|SUMO3;ENSG00000184900|ENST00000332859|SUMO3;ENST00000397898.7_1_21:46226868-46228953:-|nuORF	nc|ENSG00000184900|P55854-2|SUMO3	nc|ENSG00000184900|P55854-2|SUMO3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.7772216796875	2	565.77747	1129.54039	-0.7632	-0.0004318	0.071637	4.0531E-05	-0.69157	-0.00039127	565.7774397981867	48.163	0.76556	48.633	48.308	49.074	0.46941					46	18	4	0	0	0	0.00073685	2	4622	4622;4634		124.08	55.595	1	1052600			63242	7651	42059	42076	71763;71764	71763					-0.019200527703333137
VPESSLAGHSF	11	Unmodified	_VPESSLAGHSF_					0	0	0		nc|ENSG00000184900|P55854-2|SUMO3;ENSG00000184900|ENST00000332859|SUMO3;ENST00000397898.7_1_21:46226868-46228953:-|nuORF	nc|ENSG00000184900|P55854-2|SUMO3	nc|ENSG00000184900|P55854-2|SUMO3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	565.7767944335938	2	565.77747	1129.54039	0.16128	9.1246E-05	-0.31993	-0.00018101	-0.15865	-8.9761E-05	565.7770484758754	47.915	0.64504	48.839	48.542	49.187	0.92315					40	15	3	0	0	0	5.9727E-06	2	4613	4613;4623		145.16	68.309	1	1037100			63243	7651	42059	42076	71765;71766	71765					-0.019200527703333137
VPEVIKDL	8	Unmodified	_VPEVIKDL_					0	0	0		nc|ENSG00000137857|Q9NRD9-2|DUOX1;ENST00000557893.5_1_15:45440187-45444854:+|nuORF;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;ENSG00000137857|ENST00000389037|DUOX1	nc|ENSG00000137857|Q9NRD9-2|DUOX1	nc|ENSG00000137857|Q9NRD9-2|DUOX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.7724304199219	2	456.773668	911.532783	-1.1567	-0.00052834	-1.685	-0.00076968	-2.8417	-0.001298	456.7726883987969	89.791	2.1769	90.003	88.879	91.056	0.21271					109	51	4	0	0	0	0.89494	1	8989	8989		37.159	0	1	1072500			63244	14947	42060	42077	71767	71767					0.07347839700048553
VPEVVGVI	8	Unmodified	_VPEVVGVI_					0	0	0			REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	REV__nc|ENSG00000130234|Q9BYF1-3|ACE2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2508850097656	2	406.249829	810.485105	-0.96192	-0.00039078	-1.7817	-0.00072381	-2.7436	-0.0011146	406.24902234521767	111.59	0.90381	111.59	111.1	112	0					62	31	3	0	0	0	0.85787	1	11626	11626		9.4706	0	1	63667	+		63245	18859	42061	42078	71768	71768					0.07228185499855044
VPFASFFL	8	Unmodified	_VPFASFFL_					0	0	0		ENSG00000151148|ENST00000342494|UBE3B;ENST00000449510.6_1_12:109955755-109964222:+|nuORF;ENST00000538070.1_1_12:109958991-109971866:+|nuORF	ENSG00000151148|ENST00000342494|UBE3B	ENSG00000151148|ENST00000342494|UBE3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.2537841796875	2	464.252372	926.49019	0.72749	0.00033774	2.8388	0.0013179	3.5663	0.0016557	464.2536028059507	83.979	4.798	83.91	82.673	87.471	-0.069313					318	111	4	0	0	0	0.73619	1	8681	8681		65.897	19.131	1	1578600			63246	5097	42062	42079	71769	71769					0.024004893624805845
VPFKLKLHGI	10	Unmodified	_VPFKLKLHGI_					0	0	0		nc|ENSG00000174611|Q8NBH2-3|KY;ENSG00000174611|ENST00000423778|KY	nc|ENSG00000174611|Q8NBH2-3|KY	nc|ENSG00000174611|Q8NBH2-3|KY	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.3719482421875	2	576.368601	1150.72265	-0.57264	-0.00033005	0.41939	0.00024172	-0.15326	-8.8333E-05	576.3687132488117	43.612	2.6873	43.61	42.848	45.535	-0.0024452					116	63	3	0	0	0	0.86589	1	3424	3424		29.15	0	1	229930			63247	6952	42063	42080	71770	71770					0.15331751433086538
VPFKLPVM	8	Unmodified	_VPFKLPVM_					0	0	0			REV__ENSG00000138356|ENST00000374700|AOX1	REV__ENSG00000138356|ENST00000374700|AOX1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.77734375	2	465.777699	929.540846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.911	1	79.855	79.355	80.355	-0.056503								0	0	0	0.29498	1	8014	8014		26.796	2.2769	1		+		63248	19461	42064	42081	71771	71771					0.07325695415829614
VPFLPLLL	8	Unmodified	_VPFLPLLL_					0	0	0		nc|ENSG00000155313|Q9UHP3|USP25;nc|ENSG00000155313|Q9UHP3-1|USP25;ENSG00000155313|ENST00000400183|USP25;ENST00000478932.1_1_21:17250099-17250791:+|nuORF	nc|ENSG00000155313|Q9UHP3|USP25	nc|ENSG00000155313|Q9UHP3|USP25	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3009948730469	2	456.301865	910.589176	-1.9367	-0.0008837	0.44582	0.00020343	-1.4908	-0.00068028	456.30190517421295	35.075	2.0362	35.075	34.654	36.69	0					139	52	4	0	0	0	0.85228	1	1981	1981		10.185	0	1	943370			63249	5321	42065	42082	71772	71772					0.13030512327384258
VPFLPVNPEY	10	Unmodified	_VPFLPVNPEY_					0	0	0		ENST00000551455.5_1_12:110388962-110434038:-|nuORF;nc|ENSG00000139436|Q14161-2|GIT2;nc|ENSG00000139436|Q14161-11|GIT2;nc|ENSG00000139436|Q14161-7|GIT2;nc|ENSG00000139436|Q14161-6|GIT2;nc|ENSG00000139436|Q14161-10|GIT2;nc|ENSG00000139436|Q14161-8|GIT2;nc|ENSG00000139436|Q14161-4|GIT2;nc|ENSG00000139436|Q14161-5|GIT2;nc|ENSG00000139436|Q14161-3|GIT2;ENSG00000139436|ENST00000355312|GIT2;ENST00000473217.5_1_17:27902646-27905994:-|nuORF;nc|ENSG00000139436|Q14161-9|GIT2;ENSG00000108262|ENST00000225394|GIT1;nc|ENSG00000108262|Q9Y2X7-3|GIT1	ENST00000551455.5_1_12:110388962-110434038:-|nuORF	ENST00000551455.5_1_12:110388962-110434038:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	587.8110961914062	2	587.810782	1173.60701	-0.50082	-0.00029439	0.21743	0.00012781	-0.28339	-0.00016658	587.8106739151787	86.296	0.81335	86.74	86.367	87.18	0.44331					50	19	4	0	0	0	0.28217	2	10097	10097;10109		74.255	12.564	1	734410			63250	4369	42066	42083	71773;71774	71773					0.027151827915531612
VPFLPVNPEY	10	Unmodified	_VPFLPVNPEY_					0	0	0		ENST00000551455.5_1_12:110388962-110434038:-|nuORF;nc|ENSG00000139436|Q14161-2|GIT2;nc|ENSG00000139436|Q14161-11|GIT2;nc|ENSG00000139436|Q14161-7|GIT2;nc|ENSG00000139436|Q14161-6|GIT2;nc|ENSG00000139436|Q14161-10|GIT2;nc|ENSG00000139436|Q14161-8|GIT2;nc|ENSG00000139436|Q14161-4|GIT2;nc|ENSG00000139436|Q14161-5|GIT2;nc|ENSG00000139436|Q14161-3|GIT2;ENSG00000139436|ENST00000355312|GIT2;ENST00000473217.5_1_17:27902646-27905994:-|nuORF;nc|ENSG00000139436|Q14161-9|GIT2;ENSG00000108262|ENST00000225394|GIT1;nc|ENSG00000108262|Q9Y2X7-3|GIT1	ENST00000551455.5_1_12:110388962-110434038:-|nuORF	ENST00000551455.5_1_12:110388962-110434038:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.8106079101562	2	587.810782	1173.60701	-0.61423	-0.00036105	0.25967	0.00015263	-0.35457	-0.00020842	587.8108412997781	86.373	0.81249	86.827	86.451	87.264	0.45429					45	19	3	0	0	0	0.28217	2	10166	10142;10166		74.255	24.231	1	715500			63251	4369	42066	42083	71775;71776	71776					0.027151827915531612
VPFLRPFAAF	10	Unmodified	_VPFLRPFAAF_					0	0	0			REV__ENST00000408938.2_3_7:99146127-99156118:-|nuORF	REV__ENST00000408938.2_3_7:99146127-99156118:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8334350585938	2	582.831852	1163.64915	-0.83199	-0.00048491	2.1707	0.0012652	1.3387	0.00078025	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.86482	1	9822	9822		25.45	4.613	1	796430	+		63252	26325	42067	42084	71777	71777					0.07387202990594233
VPFNIPLEF	9	Unmodified	_VPFNIPLEF_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.2966918945312	2	538.294768	1074.57498	1.4165	0.00076247	-1.3372	-0.00071981	0.079251	4.266E-05	538.2938571402276	102.11	0.78074	102.37	102.07	102.85	0.26323					52	18	4	0	0	0	0.22631	3	12386	12386;12400;12412		71.296	10.324	1	2100300			63253	1951	42068	42085	71778;71779;71780	71778					0.04067815108442119
VPFNIPLEF	9	Unmodified	_VPFNIPLEF_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.2963256835938	2	538.294768	1074.57498	2.3149	0.0012461	-2.2795	-0.001227	0.035469	1.9093E-05	538.2933770208962	102.11	0.81071	102.41	102.09	102.9	0.29865					52	18	4	0	0	0	0.12652	3	12447	12433;12447;12459		87.754	18.967	1	2358600			63254	1951	42068	42085	71781;71782;71783	71782					0.04067815108442119
VPFVIAICRF	10	Unmodified	_VPFVIAICRF_					0	0	0			REV__ENSG00000173198|ENST00000373304|CYSLTR1	REV__ENSG00000173198|ENST00000373304|CYSLTR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8328857421875	2	582.833537	1163.65252	2.3168	0.0013503	-3.8248	-0.0022292	-1.508	-0.00087892	582.8313275695042	94.548	3.2085	94.489	93.331	96.54	-0.059212					184	75	3	0	0	0	0.86589	1	9980	9980		29.15	1.2673	1	663000	+		63255	21899	42069	42086	71784	71784					0.07724129772941524
VPGAGPGFR	9	Unmodified	_VPGAGPGFR_					0	0	0			REV__ENST00000588254.1_1_19:56000611-56002653:+|nuORF	REV__ENST00000588254.1_1_19:56000611-56002653:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	429.23583984375	2	429.235045	856.455536	-1.7002	-0.00072977	3.2929	0.0014134	1.5927	0.00068365	429.23632496484737	63.188	2.3667	63.302	62.678	65.045	0.11389					282	104	4	0	0	0	0.77546	1	5550	5550		31.955	5.1588	1	6358600	+		63256	22371	42070	42087	71785	71785					0.02156666274379404
VPGAGPGFR	9	Unmodified	_VPGAGPGFR_					0	0	0			REV__ENST00000588254.1_1_19:56000611-56002653:+|nuORF	REV__ENST00000588254.1_1_19:56000611-56002653:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	429.2357482910156	2	429.235045	856.455536	-0.96904	-0.00041595	2.5449	0.0010923	1.5758	0.0006764	429.23600225893705	63.259	2.2189	63.282	62.72	64.938	0.022984					256	90	4	0	0	0	0.78058	1	5524	5524		30.504	5.0535	1	5703300	+		63257	22371	42070	42087	71786	71786					0.02156666274379404
VPGAGRREP	9	Unmodified	_VPGAGRREP_					0	0	0		nc|ENSG00000172977|Q92993-4|KAT5;ENSG00000172977|ENST00000341318|KAT5	nc|ENSG00000172977|Q92993-4|KAT5	nc|ENSG00000172977|Q92993-4|KAT5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	469.7619934082031	2	469.761958	937.509363	0.18565	8.7212E-05	-0.98189	-0.00046125	-0.79623	-0.00037404	469.76127734615494	35.397	1.4141	35.503	35.2	36.614	0.10604					71	45	2	0	0	0	0.76255	1	1885	1885		35.618	1.4457	1	151100			63258	6812	42071	42088	71787	71787					0.03810838706078812
VPGDRLVE	8	Unmodified	_VPGDRLVE_					0	0	0		nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;ENSG00000196535|ENST00000527372|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.7447509765625	2	442.745442	883.476331	-1.7989	-0.00079646	0.28527	0.0001263	-1.5136	-0.00067016	442.7455363833493	89.31	0.69753	89.482	89.168	89.866	0.17234					44	15	4	0	0	0	0.91472	1	8851	8851		44.117	0	1	882250			63259	8070	42072	42089	71788	71788					0.02993211863383749
VPGEASIIIV	10	Unmodified	_VPGEASIIIV_					0	0	0			REV__ENSG00000134463|ENST00000379215|ECHDC3	REV__ENSG00000134463|ENST00000379215|ECHDC3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	499.3000793457031	2	499.30005	996.585547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.962	1	53.033	52.533	53.533	0.070713								0	0	0	0.45132	1	4300	4300		30.504	3.8107	1		+		63260	19144	42073	42090	71789	71789					0.08711797762862261
VPGGSPRR	8	Unmodified	_VPGGSPRR_					0	0	0		ENSG00000171450|ENST00000302625|CDK5R2	ENSG00000171450|ENST00000302625|CDK5R2	ENSG00000171450|ENST00000302625|CDK5R2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.23748779296875	2	413.238119	824.461684	-0.12335	-5.0972E-05	0.56146	0.00023202	0.43812	0.00018105	413.2382293646156	77.335	10.029	77.284	73.576	83.605	-0.050789					570	315	3	0	0	0	0.86288	1	7360	7360		26.796	0	1	1978800			63261	6664	42074	42091	71790	71790					0.04243184505901354
VPGIIKTD	8	Unmodified	_VPGIIKTD_					0	0	0		ENST00000556550.1_1_14:24113620-24113809:+|nuORF;ENSG00000100867|ENST00000250383|DHRS2;nc|ENSG00000100867|Q13268-2|DHRS2	ENST00000556550.1_1_14:24113620-24113809:+|nuORF	ENST00000556550.1_1_14:24113620-24113809:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7519836425781	2	421.752736	841.490919	-1.7782	-0.00074997	0.91991	0.00038797	-0.85831	-0.000362	421.75218958440666	77.386	3.85	77.511	77.102	80.952	0.12485					260	132	4	0	0	0	0.84341	1	7220	7220		24.203	0	1	434130			63262	1877	42075	42092	71791	71791					0.06383284011508294
VPGIILGSS	9	Unmodified	_VPGIILGSS_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.75177001953125	2	421.752736	841.490919	0.038992	1.6445E-05	-1.6915	-0.00071338	-1.6525	-0.00069693	421.7514189748159	77.551	3.9456	78.119	76.03	79.975	0.56835					161	100	3	0	0	0	0.77546	1	8816	8816		31.955	1.4512	1	329070			63263	3805	42076	42093	71792	71792					0.06383284011531032
VPGILHCL	8	Unmodified	_VPGILHCL_					0	0	0			REV__ENSG00000174373|ENST00000680220|RALGAPA1	REV__ENSG00000174373|ENST00000680220|RALGAPA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.2457580566406	2	426.244024	850.473494	2.6022	0.0011092	2.1484	0.00091576	4.7507	0.0020249	426.2448505635507	87.493	3.3011	87.546	86.187	89.488	0.053024					131	77	2	0	0	0	0.84567	1	9021	9021		24.504	0.30126	1	4266000	+		63264	21989	42077	42094	71793	71793					0.04227665204859932
VPGKLGVR	8	Unmodified	_VPGKLGVR_					0	0	0		ENST00000594962.5_1_19:17608063-17615347:+|nuORF	ENST00000594962.5_1_19:17608063-17615347:+|nuORF	ENST00000594962.5_1_19:17608063-17615347:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2685852050781	2	413.268887	824.523222	0.027364	1.1309E-05	-0.90754	-0.00037506	-0.88018	-0.00036375	413.2683530994615	72.986	0.56035	73.54	73.232	73.792	0.55386					31	13	3	0	0	0	0.86288	1	8207	8207		26.796	0	1	730520			63265	14324	42078	42095	71794	71794					0.10394116205179671
VPGKPLRLC	9	Unmodified	_VPGKPLRLC_					0	0	0		ENST00000299088.10_1_14:23467769-23467862:-|nuORF	ENST00000299088.10_1_14:23467769-23467862:-|nuORF	ENST00000299088.10_1_14:23467769-23467862:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79608154296875	2	491.796955	981.579357	-0.0088364	-4.3457E-06	-2.3736	-0.0011673	-2.3824	-0.0011717	491.7956740138642	53.102	2.6907	53.099	52.069	54.76	-0.0032997					213	78	4	0	0	0	0.7932	1	4802	4802		17.365	2.7009	1	782460			63266	9778	42079	42096	71795	71795					0.08783001050323946
VPGLIESP	8	Unmodified	_VPGLIESP_					0	0	0			REV__nc|ENSG00000165246|Q8NFZ3|NLGN4Y	REV__nc|ENSG00000165246|Q8NFZ3|NLGN4Y	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.7845458984375	2	406.231636	810.448719	-0.031309	-1.2719E-05	0.55285	0.00022458	0.52154	0.00021187	406.23177454291005	34.657	0.72749	34.602	34.324	35.051	-0.055149					52	31	2	0	0	0	0.4196	1	1803	1803		8.8223	4.8371	1	294230	+		63267	15956	42080	42097	71796	71796					0.03591308603131438
VPGLLLLSLC	10	Unmodified	_VPGLLLLSLC_					0	0	0			REV__ENST00000395491.6_1_17:21217603-21217801:+|nuORF	REV__ENST00000395491.6_1_17:21217603-21217801:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.3179321289062	2	514.314646	1026.61474	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.054	1	17.978	17.478	18.478	-0.07671								0	0	0	0.45132	1	264	264		16.473	0.83134	1		+		63268	26111	42081	42098	71797	71797					0.10249618787497639
VPGLLTEP	8	Unmodified	_VPGLLTEP_					0	0	0		ENST00000528686.2_1_11:30602025-30608317:-|nuORF	ENST00000528686.2_1_11:30602025-30608317:-|nuORF	ENST00000528686.2_1_11:30602025-30608317:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2374572753906	2	413.239461	824.46437	-1.8341	-0.00075793	0.52075	0.00021519	-1.3134	-0.00054274	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.86791	1	7484	7484		28.254	0	1	2012200			63269	13307	42082	42099	71798	71798					0.045115951201864846
VPGLRRGEHL	10	Unmodified	_VPGLRRGEHL_					0	0	0			REV__nc|ENSG00000168477|P22105-1|TNXB	REV__nc|ENSG00000168477|P22105-1|TNXB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3302001953125	2	567.330539	1132.64652	-0.51077	-0.00028978	-0.70581	-0.00040043	-1.2166	-0.0006902	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.86718	1	9001	9001		27.882	7.8855	1	11042000	+		63270	21491	42083	42100	71799	71799					0.0855074758567298
VPGLRRGEHL	10	Unmodified	_VPGLRRGEHL_					0	0	0			REV__nc|ENSG00000168477|P22105-1|TNXB	REV__nc|ENSG00000168477|P22105-1|TNXB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.329833984375	2	567.330539	1132.64652	1.5887	0.00090129	-2.6625	-0.0015105	-1.0739	-0.00060923	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.86201	1	9581	9581		24.203	2.2429	1	5459400	+		63271	21491	42083	42100	71800	71800					0.0855074758567298
VPGMAILM	8	Unmodified	_VPGMAILM_					0	0	0		ENST00000488337.5_1_11:116714606-116714729:-|nuORF	ENST00000488337.5_1_11:116714606-116714729:-|nuORF	ENST00000488337.5_1_11:116714606-116714729:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	416.22760009765625	2	416.226985	830.439417	0.033525	1.3954E-05	2.5051	0.0010427	2.5387	0.0010567	416.22799359286057	33.507	1.1551	33.461	33.091	34.246	-0.045815					63	50	2	0	0	0	0.84567	1	1681	1681		24.504	5.144	1	467530			63272	12623	42084	42101	71801	71801					0.017415007216186495
VPGMAILM	8	Unmodified	_VPGMAILM_					0	0	0		ENST00000488337.5_1_11:116714606-116714729:-|nuORF	ENST00000488337.5_1_11:116714606-116714729:-|nuORF	ENST00000488337.5_1_11:116714606-116714729:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	416.226985	830.439417	-1.9052	-0.000793	4.4188	0.0018392	2.5135	0.0010462	416.2288010336944	33.66	1.5854	33.706	32.883	34.469	0.045849	0.12265	0.0006915	NaN	24.504	81	70	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	509790			63273	12623	42084	42101							0.017415007216186495
VPGNEHAR	8	Unmodified	_VPGNEHAR_					0	0	0		ENST00000474370.1_1_7:33138787-33148984:-|nuORF;ENSG00000164610|ENST00000297157|RP9	ENST00000474370.1_1_7:33138787-33148984:-|nuORF	ENST00000474370.1_1_7:33138787-33148984:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	439.2525329589844	2	440.225208	878.435863	1.7151	0.00075504	-1.4459	-0.00063654	0.26917	0.0001185	440.2244422550662	16.891	0.31792	16.809	16.735	17.053	-0.0821					17	12	2	0	0	0	0.4196	1	204	204		13.775	6.085	1	88704			63274	5979	42085	42102	71802	71802					-0.008217097363967696
VPGPILTL	8	Unmodified	_VPGPILTL_					0	0	0			REV__ENSG00000039987|ENST00000553030|BEST2	REV__ENSG00000039987|ENST00000553030|BEST2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.2348937988281	2	405.260197	808.50584	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.241	1	63.208	62.708	63.708	-0.033714								0	0	0	0.30928	1	5996	5996		46.766	0	1		+		63275	16313	42086	42103	71803	71803					0.09392775879518922
VPGRANIH	8	Unmodified	_VPGRANIH_					0	0	0			REV__nc|ENSG00000151468|Q9BQI4-2|CCDC3	REV__nc|ENSG00000151468|Q9BQI4-2|CCDC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	432.2468566894531	2	432.245944	862.477334	1.4323	0.0006191	0.96569	0.00041741	2.398	0.0010365	432.2464138290426	97.895	1.475	98.281	97.765	99.24	0.38548					115	35	5	0	0	0	0.89457	1	11795	11795		37.028	0	1	6652700	+		63276	20251	42087	42104	71804	71804					0.04059471022924299
VPGRGRPL	8	Unmodified	_VPGRGRPL_					0	0	0		ENST00000300835.8_2_16:30662198-30662429:+|nuORF	ENST00000300835.8_2_16:30662198-30662429:+|nuORF	ENST00000300835.8_2_16:30662198-30662429:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	425.77484130859375	2	426.264136	850.51372	0.088824	3.7862E-05	-1.912	-0.00081502	-1.8232	-0.00077716	426.2637362471241	39.533	0.25481	39.502	39.439	39.694	-0.03027					6	5	2	0	0	0	0.4196	1	2755	2755		8.8223	0	1	17355			63277	9796	42088	42105	71805	71805					0.08248347919652588
VPGSPFTAR	9	Unmodified	_VPGSPFTAR_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.2529602050781	2	466.253434	930.492316	-0.025871	-1.2063E-05	0.23632	0.00011018	0.21044	9.8121E-05	466.2533729769551	25.429	0.75331	25.392	25.026	25.779	-0.037176					42	21	3	0	0	0	0.67345	1	1015	1015		42.396	7.1954	1	90498			63278	8114	42089	42106	71806	71806					0.024289181002814075
VPGSPFTAR	9	Unmodified	_VPGSPFTAR_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	466.253434	930.492316	0.58367	0.00027214	-0.25584	-0.00011929	0.32783	0.00015285	466.25309008937415	25.242	0.58601	25.292	25.002	25.588	0.050451	-0.066281	-0.0004277	NaN	42.396	40	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74834			63279	8114	42089	42106							0.024289181002814075
VPGSPFTAR	9	Unmodified	_VPGSPFTAR_					0	0	0		nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA;ENST00000490936.5_1_X:153579531-153588003:-|nuORF	nc|ENSG00000196924|P21333-2|FLNA	nc|ENSG00000196924|P21333-2|FLNA	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	466.253434	930.492316	-0.29545	-0.00013775	0.54028	0.00025191	0.24483	0.00011415	466.25350160116886	25.432	0.71097	25.391	25.111	25.822	-0.041168	0.032604	0.00031468	NaN	42.396	43	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102900			63280	8114	42089	42106							0.024289181002814075
VPGVALVAL	9	Unmodified	_VPGVALVAL_					0	0	0			REV__ENST00000252032.9_1_20:3232633-3232870:-|nuORF	REV__ENST00000252032.9_1_20:3232633-3232870:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	419.775146484375	2	419.773471	837.53239	-0.26725	-0.00011218	3.5616	0.0014951	3.2944	0.0013829	419.7748496266626	42.5	3.7115	42.454	41.629	45.34	-0.045471					238	94	5	0	0	0	0.7932	1	2770	2770		21.702	0	1	9723800	+		63281	24289	42090	42107	71807	71807					0.10712464770847419
VPGVVLFC	8	Unmodified	_VPGVVLFC_					0	0	0		ENST00000409863.5_1_7:24870486-24873964:-|nuORF	ENST00000409863.5_1_7:24870486-24873964:-|nuORF	ENST00000409863.5_1_7:24870486-24873964:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2330322265625	2	417.233125	832.451696	0.068289	2.8493E-05	-2.4602	-0.0010265	-2.3919	-0.000998	417.2331943797063	32.781	0.56691	32.749	32.48	33.047	-0.032677					56	27	3	0	0	0	0.84567	1	1548	1548		24.504	6.1796	1	104990			63282	11316	42091	42108	71808	71808					0.0287686045630835
VPGYLLVQ	8	Unmodified	_VPGYLLVQ_					0	0	0		nc|ENSG00000157593|Q8TB61-3|SLC35B2;ENSG00000157593|ENST00000393812|SLC35B2;nc|ENSG00000157593|Q8TB61-2|SLC35B2	nc|ENSG00000157593|Q8TB61-3|SLC35B2	nc|ENSG00000157593|Q8TB61-3|SLC35B2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	445.6358947753906	2	444.763104	887.511654	0.19218	8.5477E-05	-1.2934	-0.00057527	-1.1012	-0.00048979	444.7608608400625	39.345	0.99059	39.433	38.851	39.841	0.088375					35	26	2	0	0	0	0.4196	1	2431	2431		12.959	0	1	97081			63283	5440	42092	42109	71809	71809					0.06339874391198919
VPGYSEDG	8	Unmodified	_VPGYSEDG_					0	0	0		nc|ENSG00000070540|Q5MNZ9-2|WIPI1;ENSG00000070540|ENST00000262139|WIPI1;ENST00000590402.1_1_17:66422197-66423441:-|nuORF	nc|ENSG00000070540|Q5MNZ9-2|WIPI1	nc|ENSG00000070540|Q5MNZ9-2|WIPI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.1756591796875	2	412.177058	822.339563	-0.18655	-7.6891E-05	-3.0083	-0.00124	-3.1949	-0.0013168	412.17579267785936	95.368	1.8182	95.435	94.838	96.656	0.066727					99	42	3	0	0	0	0.86288	1	10007	10007		26.796	0	1	1871100			63284	1245	42093	42110	71810	71810					-0.0787132208698722
VPHFTPPL	8	Unmodified	_VPHFTPPL_					0	0	0			REV__ENST00000463783.1_1_3:196665854-196666076:-|nuORF	REV__ENST00000463783.1_1_3:196665854-196666076:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	454.25390625	2	454.255446	906.496338	-0.11566	-5.2539E-05	0.31145	0.00014148	0.19579	8.8938E-05	454.2556047046908	76.943	0.72363	77.511	77.289	78.012	0.56836					27	18	2	0	0	0	0.92176	1	8786	8786		46.766	9.738	1	281440	+		63285	27083	42094	42111	71811	71811					0.039350075939978524
VPHSETSVLLP	11	Unmodified	_VPHSETSVLLP_					0	0	0			REV__ENST00000357802.6_1_22:42970741-42976277:-|nuORF	REV__ENST00000357802.6_1_22:42970741-42976277:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	588.9880981445312	2	589.824421	1177.63429	0.32634	0.00019249	3.3407	0.0019704	3.667	0.0021629	590.3273324320876	38.237	0.12876	38.331	38.211	38.34	0.094322					5	4	2	0	0	0	0.17387	1	2242	2242		23.523	0	1	30229	+		63286	23076	42095	42112	71812	71812					0.052576663319541694
VPHSIINGY	9	Unmodified	_VPHSIINGY_					0	0	0		nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6;ENSG00000089157|ENST00000392514|RPLP0	nc|ENSG00000089157|P05388-2|RPLP0	nc|ENSG00000089157|P05388-2|RPLP0	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.2650451660156	2	500.266542	998.51853	-0.35005	-0.00017512	-0.14673	-7.3406E-05	-0.49678	-0.00024852	500.26637356465386	47.953	0.64504	48.877	48.542	49.187	0.92315					38	15	3	0	0	0	0.080198	1	4636	4636		97.473	3.4663	1	2414300			63287	1612	42096	42113	71813	71813					0.01921187271773306
VPHSIINGY	9	Unmodified	_VPHSIINGY_					0	0	0		nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6;ENSG00000089157|ENST00000392514|RPLP0	nc|ENSG00000089157|P05388-2|RPLP0	nc|ENSG00000089157|P05388-2|RPLP0	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	500.266542	998.51853	-1.5562	-0.00077851	1.0466	0.00052358	-0.50958	-0.00025493	500.26694273492865	48.141	0.72526	48.61	48.27	48.995	0.46941	-0.13334	0.00060437	NaN	97.473	43	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2177000			63288	1612	42096	42113							0.01921187271773306
VPIFIALAM	9	Unmodified	_VPIFIALAM_					0	0	0			REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7908020019531	2	487.790807	973.56706	-0.085473	-4.1693E-05	-0.2767	-0.00013497	-0.36217	-0.00017666	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.78292	2	8339	8339;8554		29.842	3.1486	1	1889700	+		63289	17137	42097	42114	71814;71815	71814					0.07921964587285402
VPIFPRASA	9	Unmodified	_VPIFPRASA_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2777099609375	2	479.279452	956.544351	-0.83761	-0.00040145	-3.5851	-0.0017182	-4.4227	-0.0021197	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.76255	1	7798	7798		35.618	6.4482	1	2142700	+		63290	18791	42098	42115	71816	71816					0.06434081514032641
VPILALAQ	8	Unmodified	_VPILALAQ_					0	0	0		ENST00000546155.5_1_19:41116240-41116471:+|nuORF	ENST00000546155.5_1_19:41116240-41116471:+|nuORF	ENST00000546155.5_1_19:41116240-41116471:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.76708984375	2	412.765646	823.516739	-1.7521	-0.00072319	3.4462	0.0014225	1.6941	0.00069928	412.7678061230934	49.11	3.161	49.11	47.72	50.881	0					177	80	4	0	0	0	0.81548	1	3821	3821		20.482	1.1219	1	570960			63291	13585	42099	42116	71817	71817					0.0979217825380374
VPILASKP	8	Unmodified	_VPILASKP_					0	0	0			REV__ENSG00000138439|ENST00000392238|FAM117B	REV__ENSG00000138439|ENST00000392238|FAM117B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7659606933594	2	412.765646	823.516739	-1.8992	-0.00078392	4.1525	0.001714	2.2533	0.0009301	412.76765198426614	41.794	3.0272	41.798	40.935	43.962	0.0043983					161	84	4	0	0	0	0.884	1	2730	2730		33.516	0	1	640430	+		63292	19473	42100	42117	71818	71818					0.0979217825380374
VPINTASPTP	10	Unmodified	_VPINTASPTP_					0	0	0		ENST00000573956.1_1_17:79857089-79857644:+|nuORF;nc|ENSG00000141552|Q9NYG5-2|ANAPC11	ENST00000573956.1_1_17:79857089-79857644:+|nuORF	ENST00000573956.1_1_17:79857089-79857644:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.77093505859375	2	498.771657	995.528761	1.4022	0.0006994	-2.2226	-0.0011086	-0.82032	-0.00040915	498.7703924385365	107.18	1.1359	107.28	106.73	107.87	0.10396					94	42	3	0	0	0	0.74274	1	13042	13042		42.396	8.2236	1	733090			63293	14029	42101	42118	71819	71819					0.030817502063200664
VPINTASPTP	10	Unmodified	_VPINTASPTP_					0	0	0		ENST00000573956.1_1_17:79857089-79857644:+|nuORF;nc|ENSG00000141552|Q9NYG5-2|ANAPC11	ENST00000573956.1_1_17:79857089-79857644:+|nuORF	ENST00000573956.1_1_17:79857089-79857644:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	498.771657	995.528761	4.52	0.0022544	-5.4643	-0.0027254	-0.94431	-0.000471	498.7687991567947	107.1	1.0481	107.25	106.87	107.92	0.14929	-0.017337	-0.0013428	NaN	42.396	78	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	806790			63294	14029	42101	42118							0.030817502063200664
VPIPQLAS	8	Unmodified	_VPIPQLAS_					0	0	0			REV__nc|ENSG00000204842|Q99700|ATXN2	REV__nc|ENSG00000204842|Q99700|ATXN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7461242675781	2	412.747453	823.480354	-1.8202	-0.00075129	-0.83652	-0.00034527	-2.6567	-0.0010966	412.7469769415949	84.864	3.004	85.04	83.072	86.076	0.17561					129	69	4	0	0	0	0.81548	1	8266	8266		20.482	0	1	1518200	+		63295	30163	42102	42119	71820	71820					0.06155301357080134
VPISEVSLD	9	Unmodified	_VPISEVSLD_					0	0	0		ENSG00000178177|ENST00000635767|LCORL	ENSG00000178177|ENST00000635767|LCORL	ENSG00000178177|ENST00000635767|LCORL	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27752685546875	2	479.758215	957.501877	-1.0738	-0.00051514	-0.68713	-0.00032966	-1.7609	-0.0008448	479.757751718777	85.975	3.0271	85.975	84.656	87.683	0					107	69	2	0	0	0	0.20789	1	8372	8372		30.504	6.3009	1	104070			63296	7189	42103	42120	71821	71821					0.02142641595139594
VPISEVSLD	9	Unmodified	_VPISEVSLD_					0	0	0		ENSG00000178177|ENST00000635767|LCORL	ENSG00000178177|ENST00000635767|LCORL	ENSG00000178177|ENST00000635767|LCORL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2774353027344	2	479.758215	957.501877	-0.09759	-4.682E-05	-1.9818	-0.00095078	-2.0794	-0.0009976	479.7571776847012	86.036	3.0649	86.104	84.68	87.745	0.067268					112	70	2	0	0	0	0.20789	1	8866	8866		47.916	9.1095	1	132570			63297	7189	42103	42120	71822	71822					0.02142641595139594
VPKAKKKA	8	Unmodified	_VPKAKKKA_					0	0	0		ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2998962402344	2	435.300188	868.585822	-1.3996	-0.00060924	1.7212	0.00074923	0.3216	0.00013999	435.3007743871696	72.567	5.8312	72.567	71.114	76.946	0					445	245	3	0	0	0	0.79929	5	6877	6412;6462;6605;6877;6902		19.36	6.4008	1	1072400			63298	3403	42104	42121	71823;71824;71825;71826;71827	71826					0.14627262273359065
VPKAKKKA	8	Unmodified	_VPKAKKKA_					0	0	0		ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.3002624511719	2	435.300188	868.585822	-0.16645	-7.2454E-05	0.42832	0.00018645	0.26187	0.00011399	435.3002277757243	72.147	4.3138	72.184	70.785	75.098	0.037148					357	181	3	0	0	0	0.86906	1	6842	6842		8.2313	0	1	1680500			63299	3403	42104	42121	71828	71828					0.14627262273359065
VPKAKKKA	8	Unmodified	_VPKAKKKA_					0	0	0		ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.3004150390625	2	435.300188	868.585822	-1.5736	-0.000685	1.8307	0.00079691	0.25709	0.00011191	435.30082554808143	71.861	5.8034	71.993	70.558	76.361	0.13145					452	216	4	0	0	0	0.80706	2	6724	6724;7054		19.36	5.5846	1	2081500			63300	3403	42104	42121	71829;71830	71829					0.14627262273359065
VPKAKKKA	8	Unmodified	_VPKAKKKA_					0	0	0		ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.30029296875	2	435.300188	868.585822	-1.2791	-0.00055679	1.5268	0.00066464	0.24775	0.00010784	435.30070273372115	72.029	4.3957	72.109	70.709	75.105	0.080032					452	179	3	0	0	0	0.86294	3	6525	6525;6565;6882		8.8223	0.59103	1	1852500			63301	3403	42104	42121	71831;71832;71833	71831					0.14627262273359065
VPKAKKKA	8	Unmodified	_VPKAKKKA_					0	0	0		ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.3002014160156	2	435.300188	868.585822	-0.72562	-0.00031586	0.81528	0.00035489	0.08966	3.9029E-05	435.300433469759	71.015	8.7981	71.4	68.569	77.367	0.38449					547	225	4	0	0	0	0.79929	6	7764	7764;7907;7931;7979;8442;8454		19.36	6.1176	1	5485100			63302	3403	42104	42121	71834;71835;71836;71837;71838;71839	71834					0.14627262273359065
VPKAKKKA	8	Unmodified	_VPKAKKKA_					0	0	0		ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	ENSG00000125651|ENST00000394456|GTF2F1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.3004150390625	2	435.300188	868.585822	0.19301	8.4019E-05	-0.12702	-5.5293E-05	0.065991	2.8726E-05	435.3000378711236	70.782	8.4759	71.33	68.741	77.217	0.54756					615	217	4	0	0	0	0.79929	6	7945	7771;7839;7945;8005;8041;8452		20.482	5.3652	1	6323600			63303	3403	42104	42121	71840;71841;71842;71843;71844;71845	71842					0.14627262273359065
VPKAPKHLKA	10	Unmodified	_VPKAPKHLKA_					0	0	0		nc|ENSG00000116127|Q8TCU4-2|ALMS1;ENSG00000116127|ENST00000613296|ALMS1;nc|ENSG00000116127|Q8TCU4-3|ALMS1	nc|ENSG00000116127|Q8TCU4-2|ALMS1	nc|ENSG00000116127|Q8TCU4-2|ALMS1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	543.9807739257812	2	544.850576	1087.6866	0.91772	0.00050002	-1.501	-0.00081784	-0.58331	-0.00031782	545.3488390577645	18.22	0.10647	18.196	18.116	18.223	-0.024035					10	4	3	0	0	0	0.37624	1	304	304		21.96	1.013	1	41192			63304	2899	42105	42122	71846	71846					0.14626294256208894
VPKKPKLCEQL	11	Unmodified	_VPKKPKLCEQL_					0	0	0			REV__nc|ENSG00000124226|Q9Y508-2|RNF114	REV__nc|ENSG00000124226|Q9Y508-2|RNF114	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8820190429688	2	641.881216	1281.74788	0.91411	0.00058675	0.99432	0.00063824	1.9084	0.001225	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.60058	2	10124	9993;10124		44.377	1.2947	1	4136300	+		63305	18573	42106	42123	71847;71848	71848					0.11827438173349947
VPKKRSKRDK	10	Unmodified	_VPKKRSKRDK_					0	0	0			REV__ENSG00000149136|ENST00000278412|SSRP1	REV__ENSG00000149136|ENST00000278412|SSRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3934326171875	2	621.39367	1240.77279	-1.2196	-0.00075786	0.58312	0.00036235	-0.6365	-0.00039552	621.3939066015827	106.23	1.0134	106.28	106.14	107.15	0.053757					87	23	4	0	0	0	0.86763	1	11298	11298		26.693	4.1133	1	1823300	+		63306	20151	42107	42124	71849	71849					0.1620325409094221
VPKLLTLTQP	10	Unmodified	_VPKLLTLTQP_					0	0	0			REV__ENST00000483751.5_1_3:49846965-49847449:-|nuORF	REV__ENST00000483751.5_1_3:49846965-49847449:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	555.3535766601562	2	555.350074	1108.6856	3.1602	0.001755	2.6303	0.0014608	5.7905	0.0032158	555.3514083853938	101.05	2.5417	101	100.44	102.99	-0.052116					176	60	5	0	0	0	0.85466	1	10979	10979		20.947	0	1	5616800	+		63307	22507	42108	42125	71850	71850					0.13560035096656975
VPKLPKKCLAL	11	Unmodified	_VPKLPKKCLAL_					0	0	0		ENSG00000164893|ENST00000297524|SLC7A13;nc|ENSG00000164893|Q8TCU3-2|SLC7A13	ENSG00000164893|ENST00000297524|SLC7A13	ENSG00000164893|ENST00000297524|SLC7A13	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9292297363281	3	403.929905	1208.76789	-1.067	-0.00043099	-0.46891	-0.00018941	-1.5359	-0.0006204	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.7896	1	4111	4111		13.508	4.2961	1	5907700			63308	6018	42109	42126	71851	71851					0.17185233903956032
VPKPESKGSKL	11	Unmodified	_VPKPESKGSKL_					0	0	0			REV__ENSG00000188738|ENST00000424728|FSIP2	REV__ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.3460083007812	2	585.348063	1168.68157	-1.3622	-0.00079735	2.874	0.0016823	1.5119	0.00088496	585.3496186115639	43.906	0.92939	44.356	44.003	44.932	0.45025					61	22	4	0	0	0	0.45992	1	3998	3998		54.722	5.1863	1	5245700	+		63309	23025	42110	42127	71852	71852					0.10397945602949221
VPKRPPNPR	9	Unmodified	_VPKRPPNPR_					0	0	0			REV__ENSG00000182450|ENST00000422670|KCNK4	REV__ENSG00000182450|ENST00000422670|KCNK4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8172607421875	2	530.82235	1059.63015	-0.034216	-1.8163E-05	-2.6517	-0.0014076	-2.6859	-0.0014257	530.8208501256995	87.182	0.90881	87.249	86.836	87.745	0.067711					29	20	2	0	0	0	0.20789	1	8807	8807		21.96	7.2958	1	573890	+		63310	22524	42111	42128	71853	71853					0.10271666419566827
VPKRPPNPR	9	Unmodified	_VPKRPPNPR_					0	0	0			REV__ENSG00000182450|ENST00000422670|KCNK4	REV__ENSG00000182450|ENST00000422670|KCNK4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8167114257812	2	530.82235	1059.63015	-0.034103	-1.8103E-05	-2.6596	-0.0014118	-2.6937	-0.0014299	530.8208380498062	89.108	1.1581	89.176	88.793	89.951	0.068161					39	26	2	0	0	0	0.20789	1	9047	9047		21.96	0	1	982450	+		63311	22524	42111	42128	71854	71854					0.10271666419566827
VPKRPPNPR	9	Unmodified	_VPKRPPNPR_					0	0	0			REV__ENSG00000182450|ENST00000422670|KCNK4	REV__ENSG00000182450|ENST00000422670|KCNK4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.817138671875	2	530.82235	1059.63015	1.6523	0.00087708	-3.9318	-0.0020871	-2.2795	-0.00121	530.8199830151926	87.284	1.5375	87.21	86.86	88.397	-0.073997					60	35	2	0	0	0	0.20789	1	9047	9047		29.15	10.825	1	601210	+		63312	22524	42111	42128	71855	71855					0.10271666419566827
VPKSHLFFTA	10	Unmodified	_VPKSHLFFTA_					0	0	0		ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	573.8194580078125	2	573.818941	1145.62333	1.1984	0.00068765	-0.57205	-0.00032826	0.62632	0.00035939	573.8183058488139	100.11	0.70577	100.44	100.14	100.84	0.33295					44	17	3	0	0	0	0.47091	1	12127	12127		58.23	15.366	1	558030			63313	1122	42112	42129	71856	71856					0.0563430874833557
VPKSHLFFTA	10	Unmodified	_VPKSHLFFTA_					0	0	0		ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	ENSG00000065183|ENST00000349139|WDR3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	573.818941	1145.62333	2.0517	0.0011773	-1.3941	-0.00079993	0.65766	0.00037738	573.8177633263879	100.19	0.70939	100.53	100.15	100.86	0.34591	0.043907	-0.00051616	NaN	58.23	42	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	590550			63314	1122	42112	42129							0.0563430874833557
VPKTQGIRHCR	11	Unmodified	_VPKTQGIRHCR_					0	0	0			REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	647.8621215820312	2	647.86168	1293.70881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.36	1	118.29	117.79	118.79	-0.07531								0	0	0	0.56276	1	12699	12699		17.468	2.6031	1		+		63315	29809	42113	42130	71857	71857					0.07370150662336528
VPLAPLTT	8	Unmodified	_VPLAPLTT_					0	0	0			REV__chr16:57130587-57134775|14|13.79|0.31|5.49|+|2|TE_info:MIR,MIR_dup147783,MIR,SINE,donor,-,57130495,57130587|None,CPNE2|3	REV__chr16:57130587-57134775|14|13.79|0.31|5.49|+|2|TE_info:MIR,MIR_dup147783,MIR,SINE,donor,-,57130495,57130587|None,CPNE2|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2483825683594	2	406.249829	810.485105	-1.9274	-0.00078302	-1.0619	-0.00043141	-2.9894	-0.0012144	406.2493147377016	111.43	0.80137	111.41	111.05	111.85	-0.019882					56	30	2	0	0	0	0.81724	1	11893	11893		14.664	0	1	107510	+		63316	15634	42114	42131	71858	71858					0.07228185499832307
VPLDERIVF	9	Unmodified	_VPLDERIVF_					0	0	0		nc|ENSG00000136830|Q96TA1-2|NIBAN2;ENSG00000136830|ENST00000373312|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.3102416992188	2	544.310949	1086.60735	-0.33827	-0.00018412	1.3418	0.00073033	1.0035	0.00054621	544.3117119761495	69.028	0.86163	69.412	68.947	69.808	0.38416					59	20	4	0	0	0	0.41984	1	7593	7593		56.434	20.816	1	610600			63317	4140	42115	42132	71859	71859					0.06750602511442594
VPLDERIVF	9	Unmodified	_VPLDERIVF_					0	0	0		nc|ENSG00000136830|Q96TA1-2|NIBAN2;ENSG00000136830|ENST00000373312|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.3102416992188	2	544.310949	1086.60735	-0.50225	-0.00027338	1.2402	0.00067506	0.73797	0.00040168	544.3115271319645	68.886	0.9118	69.433	69.03	69.942	0.54694					50	21	3	0	0	0	0.54908	1	7611	7611		49.536	5.4192	1	621250			63318	4140	42115	42132	71860	71860					0.06750602511442594
VPLEIMIKF	9	Oxidation (M)	_VPLEIM(Oxidation (M))IKF_		VPLEIM(1)IKF		VPLEIM(67)IKF	0	0	1		ENST00000461708.1_1_2:170655414-170662397:+|nuORF;ENSG00000138385|ENST00000260956|SSB	ENST00000461708.1_1_2:170655414-170662397:+|nuORF	ENST00000461708.1_1_2:170655414-170662397:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.31982421875	2	553.319928	1104.6253	-0.31943	-0.00017675	0.33959	0.0001879	0.020159	1.1154E-05	553.3199245640596	78.592	1.572	79.002	78.675	80.247	0.41059					57	36	3	0	0	0	0.26953	2	8986	8975;8986		67.494	17.469	1	749560			63319	4293	42116	42133	71861;71862	71862		73			0.07717601441913757
VPLEIMIKF	9	Oxidation (M)	_VPLEIM(Oxidation (M))IKF_		VPLEIM(1)IKF		VPLEIM(90)IKF	0	0	1		ENST00000461708.1_1_2:170655414-170662397:+|nuORF;ENSG00000138385|ENST00000260956|SSB	ENST00000461708.1_1_2:170655414-170662397:+|nuORF	ENST00000461708.1_1_2:170655414-170662397:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.3191528320312	2	553.319928	1104.6253	-0.16597	-9.1837E-05	0.55317	0.00030608	0.38719	0.00021424	553.3198238697981	78.495	1.1425	79.058	78.742	79.885	0.56332					51	26	3	0	0	0	0.11055	3	8989	8989;9000;9014		90.37	34.866	1	732540			63320	4293	42116	42133	71863;71864;71865	71863		73			0.07717601441913757
VPLEIMIKF	9	Unmodified	_VPLEIMIKF_					0	0	0		ENST00000461708.1_1_2:170655414-170662397:+|nuORF;ENSG00000138385|ENST00000260956|SSB	ENST00000461708.1_1_2:170655414-170662397:+|nuORF	ENST00000461708.1_1_2:170655414-170662397:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3250122070312	2	545.322471	1088.63039	-0.9739	-0.00053109	1.9875	0.0010839	1.0136	0.00055276	545.3233654591564	84.442	0.91258	84.877	84.547	85.46	0.43538					54	22	3	0	0	0	0.051853	4	9830	9820;9830;9843;9857		107.01	35.13	1	2333400			63321	4293	42116	42134	71866;71867;71868;71869	71867					0.08961905304522588
VPLEIMIKF	9	Unmodified	_VPLEIMIKF_					0	0	0		ENST00000461708.1_1_2:170655414-170662397:+|nuORF;ENSG00000138385|ENST00000260956|SSB	ENST00000461708.1_1_2:170655414-170662397:+|nuORF	ENST00000461708.1_1_2:170655414-170662397:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3226928710938	2	545.322471	1088.63039	-0.35893	-0.00019573	1.1117	0.00060621	0.75272	0.00041048	545.3228933733284	84.558	0.87411	85.005	84.597	85.471	0.44736					52	21	3	0	0	0	0.029359	3	9876	9864;9876;9889		118.74	47.447	1	2018500			63322	4293	42116	42134	71870;71871;71872	71871					0.08961905304522588
VPLEIVEKI	9	Unmodified	_VPLEIVEKI_					0	0	0			REV__ENST00000581764.1_1_17:61907522-61908306:+|nuORF	REV__ENST00000581764.1_1_17:61907522-61908306:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	520.31103515625	2	520.323525	1038.6325	-0.45442	-0.00023645	3.6914	0.0019207	3.237	0.0016843	520.3255120078938	47.557	0.11107	48.028	47.935	48.047	0.47139					4	2	2	0	0	0	0.20789	1	4529	4529		18.324	0	1	87344	+		63323	16925	42117	42135	71873	71873					0.11472657313993295
VPLFHSHLAL	10	Unmodified	_VPLFHSHLAL_					0	0	0		ENST00000558200.1_1_14:24608904-24610543:-|nuORF;ENSG00000100908|ENST00000216799|EMC9	ENST00000558200.1_1_14:24608904-24610543:-|nuORF	ENST00000558200.1_1_14:24608904-24610543:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3306274414062	2	567.326934	1132.63931	2.9361	0.0016657	2.1523	0.0012211	5.0884	0.0028868	567.3279847475538	112.89	1.1902	112.87	112.7	113.89	-0.024811					63	32	3	0	0	0	0.86201	1	12547	12547		24.203	1.1603	1	1057400			63324	1883	42118	42136	71874	71874					0.07830014985211164
VPLFSSRVP	9	Unmodified	_VPLFSSRVP_					0	0	0		chr2:42210457-42245505|17|14.06|0.16|6.43|+|2|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|3	chr2:42210457-42245505|17|14.06|0.16|6.43|+|2|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|3	chr2:42210457-42245505|17|14.06|0.16|6.43|+|2|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.290283203125	2	501.292559	1000.57057	-0.94239	-0.00047241	-3.1642	-0.0015862	-4.1066	-0.0020586	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.62081	1	8269	8269		45.952	13.997	1	6939200			63325	336	42119	42137	71875	71875					0.07030350685522535
VPLGAKQV	8	Unmodified	_VPLGAKQV_					0	0	0		ENST00000433547.1_1_7:14028979-14029246:-|nuORF	ENST00000433547.1_1_7:14028979-14029246:-|nuORF	ENST00000433547.1_1_7:14028979-14029246:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.78515625	2	406.255446	810.496338	1.9019	0.00077264	1.9464	0.00079074	3.8483	0.0015634	406.256077264413	33.432	1.8061	33.431	33.048	34.854	-0.0016365					83	41	3	0	0	0	0.4196	1	1994	1994		37.028	8.7742	1	284450			63326	11685	42120	42138	71876	71876					0.08351007593989834
VPLGEPVFPQG	11	Unmodified	_VPLGEPVFPQG_					0	0	0		ENST00000493504.1_1_19:59093379-59093973:+|nuORF	ENST00000493504.1_1_19:59093379-59093973:+|nuORF	ENST00000493504.1_1_19:59093379-59093973:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.3086547851562	2	570.308406	1138.60226	-0.16092	-9.1776E-05	-0.012044	-6.8687E-06	-0.17297	-9.8645E-05	570.3083036686676	64.896	0.81548	65.282	64.863	65.678	0.38615					33	19	2	0	0	0	0.6493	1	7025	7025		38.754	0	1	518300			63327	12728	42121	42139	71877	71877					0.038502986487856106
VPLGPPGPQGP	11	Unmodified	_VPLGPPGPQGP_					0	0	0			REV__ENSG00000187498|ENST00000375820|COL4A1	REV__ENSG00000187498|ENST00000375820|COL4A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	508.2806396484375	2	508.282192	1014.54983	-0.38511	-0.00019575	-3.5589	-0.0018089	-3.944	-0.0020047	508.28029410514995	88.272	2.579	88.735	87.686	90.265	0.46312					198	63	4	0	0	0	0.64498	1	10505	10505		39.253	3.6345	1	2008000	+		63328	22918	42122	42140	71878	71878					0.04313760305853975
VPLHREAVALL	11	Unmodified	_VPLHREAVALL_					0	0	0		ENST00000303657.9_1_19:6007742-6016199:-|nuORF	ENST00000303657.9_1_19:6007742-6016199:-|nuORF	ENST00000303657.9_1_19:6007742-6016199:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.5837097167969	3	406.583674	1216.72919	0.73411	0.00029848	0.26959	0.00010961	1.0037	0.00040809	406.5836914632484	112.22	0.2012	112.29	112.11	112.31	0.066025					13	6	3	0	0	0	0.74022	1	12095	12095		24.232	0	1	189340			63329	9837	42123	42141	71879	71879					0.12949644593800258
VPLIRRLHS	9	Unmodified	_VPLIRRLHS_					0	0	0		nc|ENSG00000096070|Q9ULD4-3|BRPF3;nc|ENSG00000096070|Q9ULD4-2|BRPF3;ENSG00000096070|ENST00000357641|BRPF3	nc|ENSG00000096070|Q9ULD4-3|BRPF3	nc|ENSG00000096070|Q9ULD4-3|BRPF3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3167114257812	2	545.845825	1089.6771	1.2607	0.00068815	-0.13474	-7.3545E-05	1.126	0.00061461	546.3484024311867	89.921	0.13042	89.969	89.877	90.008	0.048157					4	2	2	0	0	0	0.20789	1	9293	9293		17.365	11.052	1	18411			63330	1738	42124	42142	71880	71880					0.13584525970691175
VPLKLCPA	8	Unmodified	_VPLKLCPA_					0	0	0		ENSG00000185610|ENST00000332700|DBX2	ENSG00000185610|ENST00000332700|DBX2	ENSG00000185610|ENST00000332700|DBX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.7565002441406	2	420.754224	839.493896	-0.39386	-0.00016572	2.8186	0.0011859	2.4247	0.0010202	420.7553186920564	20.988	1.6049	20.924	19.96	21.565	-0.064743					109	65	2	0	0	0	0.81724	1	590	590		14.664	0	1	83540			63331	7727	42125	42143	71881	71881					0.06772835864671833
VPLLAAQTF	9	Unmodified	_VPLLAAQTF_					0	0	0		nc|ENSG00000105339|A2RUS2-2|DENND3;nc|ENSG00000105339|A2RUS2|DENND3;ENSG00000105339|ENST00000519811|DENND3;ENST00000521477.5_1_8:142166019-142175288:+|nuORF	nc|ENSG00000105339|A2RUS2-2|DENND3	nc|ENSG00000105339|A2RUS2-2|DENND3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2814025878906	2	480.28166	958.548768	2.0772	0.00099766	-3.5987	-0.0017284	-1.5215	-0.00073073	480.27979970211794	99.254	1.495	99.616	99.254	100.75	0.36136					97	37	4	0	0	0	0.77546	1	12037	12037		31.955	0.37597	1	8902700			63332	2205	42126	42144	71882	71882					0.06783545936946211
VPLLFPSQ	8	Unmodified	_VPLLFPSQ_					0	0	0			REV__ENST00000427177.5_1_17:75495984-75496248:+|nuORF	REV__ENST00000427177.5_1_17:75495984-75496248:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.76080322265625	2	450.763104	899.511654	-1.9237	-0.00086714	-2.4593	-0.0011086	-4.383	-0.0019757	450.7619115466545	37.114	0.61713	37.114	36.778	37.395	0					29	13	3	0	0	0	0.91977	1	2202	2202		45.952	1.5748	1	105180	+		63333	26558	42127	42145	71883	71883					0.057878743911942365
VPLLFVVPW	9	Unmodified	_VPLLFVVPW_					0	0	0		ENSG00000112164|ENST00000373256|GLP1R	ENSG00000112164|ENST00000373256|GLP1R	ENSG00000112164|ENST00000373256|GLP1R	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.3243408203125	2	535.325871	1068.63719	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.35	1	110.47	109.97	110.97	0.11659								0	0	0	0.32542	1	11877	11877		21.702	0.016585	1				63334	2637	42128	42146	71884	71884					0.10561586247422383
VPLLGVALLI	10	Unmodified	_VPLLGVALLI_					0	0	0		ENSG00000130032|ENST00000674457|PRRG3	ENSG00000130032|ENST00000674457|PRRG3	ENSG00000130032|ENST00000674457|PRRG3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.34747314453125	2	504.346803	1006.67905	1.8375	0.00092675	1.0233	0.00051612	2.8609	0.0014429	504.347172191427	34.679	1.3601	35.06	34.73	36.09	0.3812					85	34	4	0	0	0	0.85108	2	2585	2585;2595		26.796	7.4361	1	1730500			63335	3617	42129	42147	71885;71886	71885					0.17598141935934564
VPLLLGLLGL	10	Unmodified	_VPLLLGLLGL_					0	0	0		ENST00000587486.6_1_19:13049472-13049670:+|nuORF;ENST00000590325.1_1_19:13049472-13051084:+|nuORF;ENSG00000179218|ENST00000316448|CALR	ENST00000587486.6_1_19:13049472-13049670:+|nuORF	ENST00000587486.6_1_19:13049472-13049670:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3478088378906	2	504.346803	1006.67905	0.25279	0.00012749	2.2254	0.0011224	2.4782	0.0012499	504.3477701271758	36.647	1.9451	36.928	36.004	37.949	0.28173					113	47	4	0	0	0	0.86786	1	2891	2891		26.796	0	1	1998100			63336	7256	42130	42148	71887	71887					0.17598141935934564
VPLLLGLLGL	10	Unmodified	_VPLLLGLLGL_					0	0	0		ENST00000587486.6_1_19:13049472-13049670:+|nuORF;ENST00000590325.1_1_19:13049472-13051084:+|nuORF;ENSG00000179218|ENST00000316448|CALR	ENST00000587486.6_1_19:13049472-13049670:+|nuORF	ENST00000587486.6_1_19:13049472-13049670:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	504.34783935546875	2	504.346803	1006.67905	2.0026	0.00101	0.50234	0.00025335	2.5049	0.0012633	504.34690233028635	36.516	1.5993	36.956	36.186	37.785	0.44043					102	38	4	0	0	0	0.86786	1	2861	2861		26.796	0	1	2044400			63337	7256	42130	42148	71888	71888					0.17598141935934564
VPLLLISGA	9	Unmodified	_VPLLLISGA_					0	0	0			REV__ENSG00000168828|ENST00000377981|OR13J1	REV__ENSG00000168828|ENST00000377981|OR13J1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7867736816406	2	441.786579	881.558604	-0.26935	-0.000119	3.25	0.0014358	2.9807	0.0013168	441.7878751353476	44.636	1.9787	44.578	43.873	45.852	-0.058262					113	48	3	0	0	0	0.7932	1	3268	3268		17.365	0.89182	1	403970	+		63338	21527	42131	42149	71889	71889					0.11308733942325944
VPLLLLSVP	9	Unmodified	_VPLLLLSVP_					0	0	0			REV__ENST00000269321.11_1_17:79826257-79826755:-|nuORF	REV__ENST00000269321.11_1_17:79826257-79826755:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.3194885253906	2	475.817879	949.621205	-1.7705	-0.00084244	3.3194	0.0015794	1.5488	0.00073697	475.8196247358917	39.531	1.3725	39.531	38.941	40.314	0					55	33	3	0	0	0	0.7932	1	2551	2551		13.775	0.81615	1	82988	+		63339	24522	42132	42150	71890	71890					0.1443788001051871
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.80291748046875	2	456.30355	910.592547	0.80667	0.00036809	0.80994	0.00036958	1.6166	0.00073767	456.30387685904844	21.656	0.83154	21.721	21.472	22.303	0.064745					40	29	2	0	0	0	0.80127	1	600	600		16.705	0.23182	1	22104			63340	5702	42133	42151	71891	71891					0.1336743910972018
VPLLMLLKEH	10	Oxidation (M)	_VPLLM(Oxidation (M))LLKEH_		VPLLM(1)LLKEH		VPLLM(40)LLKEH	0	0	1			REV__ENSG00000009765|ENST00000344419|IYD	REV__ENSG00000009765|ENST00000344419|IYD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.57476806640625	3	403.573898	1207.69987	0.57405	0.00023167	1.4947	0.00060321	2.0687	0.00083489	403.57443061209773	82.843	3.1803	82.99	82.289	85.469	0.14694					168	73	3	0	0	0	0.78666	1	8082	8082		40.058	9.4893	1	1495300	+		63341	16151	42134	42152	71892	71892		231			0.10432364253301785
VPLLRRRL	8	Unmodified	_VPLLRRRL_					0	0	0		ENST00000303212.2_1_19:5824142-5828303:+|nuORF	ENST00000303212.2_1_19:5824142-5828303:+|nuORF	ENST00000303212.2_1_19:5824142-5828303:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	511.8537292480469	2	511.85091	1021.68727	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.87	1	112.94	112.44	113.44	0.066025								0	0	0	0.31173	1	12134	12134		4.6817	0	1				63342	9827	42135	42153	71893	71893					0.17729133695934252
VPLLVLALIG	10	Unmodified	_VPLLVLALIG_					0	0	0			REV__ENSG00000012174|ENST00000379484|MBTPS2	REV__ENSG00000012174|ENST00000379484|MBTPS2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	504.3478698730469	2	504.346803	1006.67905	0.25279	0.00012749	2.2254	0.0011224	2.4782	0.0012499	504.3477701271758	36.647	1.9451	36.928	36.004	37.949	0.28173					113	47	4	0	0	0	0.85108	1	2915	2915		19.36	0	1	1998100	+		63343	16190	42136	42154	71894	71894					0.17598141935945932
VPLNHGCEV	9	Unmodified	_VPLNHGCEV_					0	0	0		ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.23602294921875	2	484.236927	966.459301	0.39551	0.00019152	-2.3516	-0.0011387	-1.9561	-0.00094721	484.23583864352696	86.77	1.4541	87.217	86.978	88.432	0.44629					87	34	4	0	0	0	0.35373	1	10141	10141		60.972	10.947	1	8816400			63344	8653	42137	42155	71895	71895					-0.025270320140862168
VPLNHGCEV	9	Unmodified	_VPLNHGCEV_					0	0	0		ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	ENSG00000215529|ENST00000400522|EFCAB8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2361145019531	2	484.236927	966.459301	-0.88512	-0.00042861	-1.8146	-0.00087868	-2.6997	-0.0013073	484.23648902418813	86.261	1.1049	86.715	86.159	87.264	0.45429					90	26	5	0	0	0	0.47272	1	10150	10150		53.351	5.4358	1	35198000			63345	8653	42137	42155	71896	71896					-0.025270320140862168
VPLPLFLI	8	Unmodified	_VPLPLFLI_					0	0	0			REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.3011169433594	2	456.301865	910.589176	-1.9609	-0.00089476	0.42413	0.00019353	-1.5368	-0.00070123	456.3019244318546	33.431	1.5568	33.431	33.135	34.692	0					145	44	4	0	0	0	0.80127	2	1750	1750;1769		16.705	0	1	2313000	+		63346	15850	42138	42156	71897;71898	71897					0.13030512327384258
VPLPSPKLPTT	11	Unmodified	_VPLPSPKLPTT_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.34716796875	2	575.347532	1148.68051	0.94019	0.00054093	-3.6496	-0.0020998	-2.7094	-0.0015588	575.3454322863764	98.249	1.7248	98.634	98.18	99.904	0.38548					107	42	5	0	0	0	0.69995	1	11900	11900		31.53	3.2755	1	3140900	+		63347	16914	42139	42157	71899	71899					0.1121173123403878
VPLRQRRQLL	10	Unmodified	_VPLRQRRQLL_					0	0	0		ENSG00000183258|ENST00000330503|DDX41;ENST00000503078.5_1_5:176943632-176943958:-|nuORF;ENST00000515562.1_1_5:176943012-176943857:-|nuORF;ENST00000505081.5_1_5:176943012-176943946:-|nuORF;ENST00000506965.5_1_5:176942058-176943946:-|nuORF	ENSG00000183258|ENST00000330503|DDX41	ENSG00000183258|ENST00000330503|DDX41	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	427.3028564453125	3	426.942084	1277.80442	0.4084	0.00017436	2.0471	0.00087401	2.4555	0.0010484	426.94207870698636	64.669	0.12155	64.793	64.718	64.839	0.12396					5	3	2	0	0	0	0.37624	1	5718	5718		4.0829	0.87158	1	27172			63348	7514	42140	42158	71900	71900					0.1766324684490428
VPLSPKRKDQK	11	Unmodified	_VPLSPKRKDQK_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3946533203125	2	648.393336	1294.77212	-1.1411	-0.00073988	-0.37128	-0.00024073	-1.5124	-0.00098061	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.77061	1	12574	12574		17.468	0.99486	1	2297700			63349	7038	42141	42159	71901	71901					0.13652414651210165
VPLSSLLLHKM	11	Unmodified	_VPLSSLLLHKM_					0	0	0			REV__chr4:103181456-103182762|61|30.23|0.45|6.08|-|1|CENPE,CENPE|1	REV__chr4:103181456-103182762|61|30.23|0.45|6.08|-|1|CENPE,CENPE|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.3724365234375	2	619.370484	1236.72641	3.0782	0.0019065	-1.2801	-0.00079283	1.7981	0.0011137	619.8710459081657	101.29	0.9677	101.61	101.32	102.29	0.32511					61	26	3	0	0	0	0.7144	1	12333	12333		29.17	0	1	2930100	+		63350	15816	42142	42160	71902	71902					0.11752053144618912
VPLSTLVVV	9	Unmodified	_VPLSTLVVV_					0	0	0			REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	REV__nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.8004150390625	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.7932	1	3868	3868		18.324	0	1	5050800	+		63351	22662	42143	42161	71903	71903					0.11905003113815837
VPLSVNPVC	9	Unmodified	_VPLSVNPVC_					0	0	0		ENSG00000188641|ENST00000370192|DPYD	ENSG00000188641|ENST00000370192|DPYD	ENSG00000188641|ENST00000370192|DPYD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2536926269531	2	464.252046	926.489538	0.61869	0.00028723	3.7395	0.0017361	4.3582	0.0020233	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.77546	1	8049	8049		31.955	2.1133	1	1482000			63352	7944	42144	42162	71904	71904					0.02335326651109426
VPLTQSKQ	8	Unmodified	_VPLTQSKQ_					0	0	0		ENST00000544798.2_1_12:124408671-124428876:-|nuORF	ENST00000544798.2_1_12:124408671-124428876:-|nuORF	ENST00000544798.2_1_12:124408671-124428876:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.7624206542969	2	450.761092	899.507631	-1.3458	-0.00060662	1.4037	0.00063273	0.057932	2.6114E-05	450.7615375119777	37.215	0.57115	37.238	36.911	37.482	0.023621					27	13	3	0	0	0	0.89043	1	2103	2103		35.618	0	1	186820			63353	13573	42145	42163	71905	71905					0.05385784897475787
VPLVIFKR	8	Unmodified	_VPLVIFKR_					0	0	0		nc|ENSG00000198626|Q92736-2|RYR2;ENSG00000198626|ENST00000366574|RYR2;ENST00000608590.5_1_1:237955470-237994843:+|nuORF;nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000198626|Q92736-2|RYR2;nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000198626|Q92736-2|RYR2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	486.3543395996094	2	486.323663	970.632772	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.34	1	114.27	113.77	114.77	-0.07								0	0	0	0.30784	1	12368	12368		14.664	5.1935	1				63354	8298;8027	42146	42164	71906	71906					0.14628121824512164
VPLVLEQLT	9	Unmodified	_VPLVLEQLT_					0	0	0		ENST00000419303.5_1_22:22348995-22398182:-|nuORF	ENST00000419303.5_1_22:22348995-22398182:-|nuORF	ENST00000419303.5_1_22:22348995-22398182:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.30938720703125	2	506.307875	1010.6012	-1.6116	-0.00081596	4.0929	0.0020723	2.4813	0.0012563	506.3098944096933	39.424	1.5109	39.424	38.73	40.241	0					81	36	3	0	0	0	0.78536	1	2537	2537		29.15	3.6994	1	128650			63355	11436	42147	42165	71907	71907					0.0963208427989457
VPLVTRLGLA	10	Unmodified	_VPLVTRLGLA_					0	0	0			REV__ENST00000419057.5_1_9:139793217-139794110:+|nuORF	REV__ENST00000419057.5_1_9:139793217-139794110:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.2546997070312	2	519.837134	1037.65972	0.028727	1.4933E-05	-0.30557	-0.00015885	-0.27684	-0.00014391	519.8368224728989	48.59	0.47569	49.495	49.21	49.686	0.90424					17	11	2	0	0	0	0.37624	1	4701	4701		23.042	0	1	170970	+		63356	26470	42148	42166	71908	71908					0.14239185645033103
VPLVTRLGLA	10	Unmodified	_VPLVTRLGLA_					0	0	0			REV__ENST00000419057.5_1_9:139793217-139794110:+|nuORF	REV__ENST00000419057.5_1_9:139793217-139794110:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	519.837134	1037.65972	-0.2137	-0.00011109	-0.49742	-0.00025858	-0.71112	-0.00036967	519.8367984794731	48.716	0.47658	49.176	48.903	49.38	0.45983	-0.1592	-9.732E-05	NaN	23.042	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	179610	+		63357	26470	42148	42166							0.14239185645033103
VPMEGREH	8	Unmodified	_VPMEGREH_					0	0	0		ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.72857666015625	2	477.726726	953.4389	1.9069	0.00091096	1.4734	0.00070387	3.3802	0.0016148	477.7275390599482	95.725	1.691	96.145	95.664	97.355	0.42051					104	40	5	0	0	0	0.9283	1	11432	11432		49.442	2.6751	1	6957300			63358	11985	42149	42167	71909	71909					-0.03968202673877386
VPMEGREH	8	Unmodified	_VPMEGREH_					0	0	0		ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.7287292480469	2	477.726726	953.4389	2.0086	0.00095957	1.3518	0.0006458	3.3604	0.0016054	477.7274989934108	97.814	1.9969	98.2	97.32	99.317	0.38548					150	48	5	0	0	0	0.87064	2	11735	11735;11782		37.159	0.13063	1	10503000			63359	11985	42149	42167	71910;71911	71910					-0.03968202673877386
VPMEGREH	8	Unmodified	_VPMEGREH_					0	0	0		ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.7281188964844	2	477.726726	953.4389	2.1837	0.0010432	-0.12292	-5.8724E-05	2.0608	0.0009845	477.7265645950069	101.48	1.0107	101.78	101.5	102.52	0.29822					62	27	3	0	0	0	0.90523	2	12317	12306;12317		44.117	5.3107	1	4071800			63360	11985	42149	42167	71912;71913	71913					-0.03968202673877386
VPMEGREH	8	Unmodified	_VPMEGREH_					0	0	0		ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.7286376953125	2	477.726726	953.4389	2.2723	0.0010855	1.7818	0.00085123	4.0542	0.0019368	477.72742644162673	103.26	1.3367	103.48	103.2	104.54	0.22556					65	32	3	0	0	0	0.91472	1	12564	12564		44.117	8.9161	1	3872800			63361	11985	42149	42167	71914	71914					-0.03968202673877386
VPMEGREH	8	Unmodified	_VPMEGREH_					0	0	0		ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.72869873046875	2	477.726726	953.4389	-0.36178	-0.00017283	3.7954	0.0018132	3.4336	0.0016403	477.7286664031754	95.828	1.4042	96.232	95.809	97.213	0.40451					90	33	5	0	0	0	0.89494	1	11488	11488		37.159	0.13063	1	7034800			63362	11985	42149	42167	71915	71915					-0.03968202673877386
VPMEGREH	8	Unmodified	_VPMEGREH_					0	0	0		ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.72869873046875	2	477.726726	953.4389	0.36854	0.00017606	3.0976	0.0014798	3.4661	0.0016559	477.7283055731362	97.887	2.0378	98.264	97.227	99.265	0.37679					128	49	5	0	0	0	0.91472	1	11850	11850		44.117	1.7207	1	10499000			63363	11985	42149	42167	71916	71916					-0.03968202673877386
VPMEGREH	8	Unmodified	_VPMEGREH_					0	0	0		ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7277526855469	2	477.726726	953.4389	1.6127	0.00077041	0.28334	0.00013536	1.896	0.00090577	477.7267468236202	101.42	0.86987	101.75	101.55	102.41	0.32511					50	22	3	0	0	0	0.9283	1	12365	12365		49.442	6.9671	1	4403400			63364	11985	42149	42167	71917	71917					-0.03968202673877386
VPMEGREH	8	Unmodified	_VPMEGREH_					0	0	0		ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	477.7286071777344	2	477.726726	953.4389	2.2506	0.0010752	1.7118	0.00081776	3.9624	0.0018929	477.72739736159696	103.26	1.4958	103.52	103.26	104.76	0.26524					60	35	3	0	0	0	0.87259	2	12610	12598;12610		58.782	12.83	1	4216400			63365	11985	42149	42167	71918;71919	71919					-0.03968202673877386
VPMEGREH	8	Unmodified	_VPMEGREH_					0	0	0		ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	477.726726	953.4389	-0.82672	-0.00039494	4.7625	0.0022752	3.9358	0.0018802	477.7291075918786	103.08	0.30746	103.26	103.16	103.47	0.18298	-0.11204	0.0024201	NaN	58.782	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	208250			63366	11985	42149	42167							-0.03968202673877386
VPMEGREH	8	Unmodified	_VPMEGREH_					0	0	0		ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	477.726726	953.4389	0.78102	0.00037312	2.6527	0.0012673	3.4338	0.0016404	477.72800657141613	103.15	0.34373	103.27	103.17	103.52	0.12622	-0.1018	0.00040429	NaN	58.782	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181810			63367	11985	42149	42167							-0.03968202673877386
VPMEGREH	8	Unmodified	_VPMEGREH_					0	0	0		ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	ENST00000457932.5_2_11:47279174-47280796:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	477.726726	953.4389	-1.6875	-0.00080616	4.9789	0.0023786	3.2914	0.0015724	477.7292842614784	103.21	0.23544	103.33	103.19	103.42	0.11494	-0.046431	0.0026268	NaN	58.782	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183920			63368	11985	42149	42167							-0.03968202673877386
VPMPVRGG	8	Unmodified	_VPMPVRGG_					0	0	0		ENST00000566034.1_1_16:1032135-1032345:+|nuORF;ENSG00000005513|ENST00000293894|SOX8	ENST00000566034.1_1_16:1032135-1032345:+|nuORF	ENST00000566034.1_1_16:1032135-1032345:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7288513183594	2	406.725998	811.437443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.132	1	76.179	75.679	76.679	0.046448								0	0	0	0.29353	1	7432	7432		28.254	2.8041	1				63369	686	42150	42168	71920	71920					0.02418208028029767
VPNCKLLN	8	Unmodified	_VPNCKLLN_					0	0	0			REV__nc|ENSG00000164885|Q00535-2|CDK5	REV__nc|ENSG00000164885|Q00535-2|CDK5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7543029785156	2	450.752213	899.489873	-0.14159	-6.3823E-05	4.4024	0.0019844	4.2608	0.0019205	450.75411383561584	79.612	2.0415	79.672	78.266	80.308	0.059349					101	63	2	0	0	0	0.87922	1	7783	7783		31.955	2.8053	1	109620	+		63370	21125	42151	42169	71921	71921					0.0361074637096408
VPNEIFNL	8	Unmodified	_VPNEIFNL_					0	0	0			REV__nc|ENSG00000115221|P18564-2|ITGB6	REV__nc|ENSG00000115221|P18564-2|ITGB6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.2332763671875	2	473.255643	944.496732	-1.2743	-0.00060305	-1.9157	-0.0009066	-3.1899	-0.0015097	473.25412095405557	39.821	1.1399	39.778	38.955	40.095	-0.043697					38	26	2	0	0	0	0.4196	1	2883	2883		40.573	3.4135	1	94627	+		63371	18094	42152	42170	71922	71922					0.022263825232016643
VPNNLLAPA	9	Unmodified	_VPNNLLAPA_					0	0	0			REV__ENSG00000173714|ENST00000311378|WFIKKN2	REV__ENSG00000173714|ENST00000311378|WFIKKN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	454.7632751464844	2	454.763635	907.512717	-1.6468	-0.00074888	0.88455	0.00040226	-0.76221	-0.00034662	454.7640048592381	47.693	0.81293	48.163	47.855	48.668	0.46941					53	20	4	0	0	0	0.72402	1	4531	4531		38.806	4.6336	1	5728200	+		63372	21947	42153	42171	71923	71923					0.055260887600866226
VPNSSSSSS	9	Unmodified	_VPNSSSSSS_					0	0	0		ENSG00000165572|ENST00000379485|KBTBD6;ENSG00000120696|ENST00000379483|KBTBD7	ENSG00000165572|ENST00000379485|KBTBD6	ENSG00000165572|ENST00000379485|KBTBD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.1916198730469	2	426.190697	850.36684	1.6375	0.00069788	-0.21588	-9.2006E-05	1.4216	0.00060587	426.19062560903467	97.031	1.3894	97.436	97.053	98.443	0.40498					97	33	4	0	0	0	0.41566	1	11696	11696		56.721	12.604	1	6310200			63373	6097	42154	42172	71924	71924					-0.06432838546595576
VPPAFLRPPSL	11	Unmodified	_VPPAFLRPPSL_					0	0	0		ENSG00000176399|ENST00000325870|DMRTA1	ENSG00000176399|ENST00000325870|DMRTA1	ENSG00000176399|ENST00000325870|DMRTA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.85595703125	2	597.355691	1192.69683	0.9357	0.00055895	-0.77395	-0.00046233	0.16175	9.662E-05	597.356102955007	94.243	5.7635	94.471	93.12	98.883	0.22863					440	136	5	0	0	0	0.69995	1	9499	9499		31.53	2.3598	1	19058000			63374	7077	42155	42173	71925	71925					0.10818857190793096
VPPDQRIT	8	Unmodified	_VPPDQRIT_					0	0	0		ENSG00000097096|ENST00000341460|SYDE2;ENST00000234668.6_1_1:85647735-85666124:-|nuORF;nc|ENSG00000097096|Q5VT97-2|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	ENSG00000097096|ENST00000341460|SYDE2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2536315917969	2	463.258717	924.50288	0.62685	0.00029039	2.7871	0.0012911	3.4139	0.0015815	463.2610714695564	85.233	0.47814	85.381	85.08	85.558	0.14857					14	10	2	0	0	0	0.4196	1	8303	8303		38.806	1.647	1	21676			63375	1746	42156	42174	71926	71926					0.03760900754696195
VPPGRARG	8	Unmodified	_VPPGRARG_					0	0	0			REV__ENST00000592804.1_1_19:804936-805922:+|nuORF	REV__ENST00000592804.1_1_19:804936-805922:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.23797607421875	2	405.240661	808.46677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.682	1	63.681	63.181	64.181	-0.00078583								0	0	0	0.29498	1	5925	5925		26.796	1.3459	1		+		63376	21873	42157	42175	71927	71927					0.05487488368510185
VPPHAKVG	8	Unmodified	_VPPHAKVG_					0	0	0			REV__ENSG00000126016|ENST00000371959|AMOT	REV__ENSG00000126016|ENST00000371959|AMOT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.7395324707031	2	402.739963	803.465373	-1.9105	-0.00076942	0.90285	0.00036361	-1.0076	-0.00040581	402.74023585359686	35.547	1.7419	35.578	35.255	36.997	0.031132					93	49	3	0	0	0	0.88915	1	1882	1882		35.201	5.3592	1	194790	+		63377	18693	42158	42176	71928	71928					0.05577854279761141
VPPHQPANLK	10	Unmodified	_VPPHQPANLK_					0	0	0			REV__ENSG00000104369|ENST00000342232|JPH1	REV__ENSG00000104369|ENST00000342232|JPH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.813720703125	2	550.81419	1099.61383	0.33749	0.00018589	-1.9213	-0.0010583	-1.5838	-0.00087237	550.8132357151909	43.658	0.44138	43.715	43.525	43.966	0.056744					17	10	2	0	0	0	0.85934	1	3046	3046		35.618	2.8059	1	157260	+		63378	17452	42159	42177	71929	71929					0.06800540462791105
VPPHQPANLK	10	Unmodified	_VPPHQPANLK_					0	0	0			REV__ENSG00000104369|ENST00000342232|JPH1	REV__ENSG00000104369|ENST00000342232|JPH1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	550.81419	1099.61383	0.14875	8.1936E-05	-1.4306	-0.00078802	-1.2819	-0.00070609	550.8133610657017	43.782	0.31844	43.79	43.605	43.923	0.0084534	0.075599	0.00030036	NaN	35.618	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	148300	+		63379	17452	42159	42177							0.06800540462791105
VPPHQPANLK	10	Unmodified	_VPPHQPANLK_					0	0	0			REV__ENSG00000104369|ENST00000342232|JPH1	REV__ENSG00000104369|ENST00000342232|JPH1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	550.81419	1099.61383	0.33749	0.00018589	-1.9213	-0.0010583	-1.5838	-0.00087237	550.8132357151909	43.658	0.44138	43.715	43.525	43.966	0.056744	0.00022769	-0.00024012	NaN	35.618	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	157260	+		63380	17452	42159	42177							0.06800540462791105
VPPHRETKT	9	Unmodified	_VPPHRETKT_					0	0	0			REV__ENSG00000145362|ENST00000357077|ANK2	REV__ENSG00000145362|ENST00000357077|ANK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8167114257812	2	532.795998	1063.57744	1.0836	0.00057735	1.7804	0.00094861	2.8641	0.001526	532.7968375450481	89.059	0.53417	89.509	89.242	89.776	0.45058					18	12	2	0	0	0	0.20789	1	10538	10538		20.947	0	1	185040	+		63381	19942	42160	42178	71930	71930					0.048196635660815446
VPPIIPHT	8	Unmodified	_VPPIIPHT_					0	0	0			REV__ENST00000481849.5_1_6:31322262-31322472:-|nuORF	REV__ENST00000481849.5_1_6:31322262-31322472:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2658386230469	2	437.263271	872.511988	1.7902	0.0007828	4.1025	0.0017939	5.8928	0.0025767	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.87807	1	800	800		31.579	4.7828	1	738160	+		63382	27453	42161	42179	71931	71931					0.07063294111037521
VPPKQASL	8	Unmodified	_VPPKQASL_					0	0	0			REV__chr20:49279208-49290897|21|75.05|0.34|7.77|+|2|TE_info:L2a,L2a_dup163796,L2,LINE,acceptor,+,49290897,49291486|ZFAS1,None|2	REV__chr20:49279208-49290897|21|75.05|0.34|7.77|+|2|TE_info:L2a,L2a_dup163796,L2,LINE,acceptor,+,49290897,49291486|ZFAS1,None|2	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.254638671875	2	420.252903	838.491253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.05	1	113.08	112.58	113.58	0.027321								0	0	0	0.29199	1	12346	12346		29.842	0	1		+		63383	15778	42162	42180	71932	71932					0.06554703731376321
VPPKRPYG	8	Unmodified	_VPPKRPYG_					0	0	0		ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000197136|Q9H6A9-2|PCNX3	ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000197136|Q9H6A9-2|PCNX3	ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.26397705078125	2	457.266345	912.518136	-1.2803	-0.00058543	-2.9682	-0.0013572	-4.2485	-0.0019427	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.86791	1	7369	7369		28.254	4.0515	1	812040			63384	8138;15189	42163	42181	71933	71933					0.05837812342565485
VPPKYTPR	8	Unmodified	_VPPKYTPR_					0	0	0			REV__nc|ENSG00000117335|P15529-16|CD46	REV__nc|ENSG00000117335|P15529-16|CD46	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2778015136719	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.91005	1	8478	8478		42.474	7.2737	1	7438100	+		63385	18257	42164	42182	71934	71934					0.06434081514032641
VPPLELTT	8	Unmodified	_VPPLELTT_					0	0	0		ENST00000356864.3_1_8:22960127-22960358:+|nuORF	ENST00000356864.3_1_8:22960127-22960358:+|nuORF	ENST00000356864.3_1_8:22960127-22960358:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.25164794921875	2	435.252569	868.490584	-0.16595	-7.2231E-05	-2.6833	-0.0011679	-2.8492	-0.0012401	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.88915	1	8041	8041		35.201	1.0282	1	2823900			63386	10372	42165	42183	71935	71935					0.05107864291653641
VPPLELTT	8	Unmodified	_VPPLELTT_					0	0	0		ENST00000356864.3_1_8:22960127-22960358:+|nuORF	ENST00000356864.3_1_8:22960127-22960358:+|nuORF	ENST00000356864.3_1_8:22960127-22960358:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.25146484375	2	435.252569	868.490584	-0.32142	-0.0001399	-2.6219	-0.0011412	-2.9433	-0.0012811	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.9159	1	9026	9026		44.531	7.372	1	2020200			63387	10372	42165	42183	71936	71936					0.05107864291653641
VPPLFATH	8	Unmodified	_VPPLFATH_					0	0	0			REV__nc|ENSG00000152601|Q9NR56-3|MBNL1	REV__nc|ENSG00000152601|Q9NR56-3|MBNL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.2409973144531	2	441.247621	880.480688	-1.447	-0.00063849	-1.7774	-0.00078427	-3.2244	-0.0014228	441.24641682051794	78.668	0.55116	78.795	78.44	78.991	0.12695					22	16	2	0	0	0	0.4196	1	7392	7392		21.702	6.0661	1	40406	+		63388	29935	42166	42184	71937	71937					0.03566721076947488
VPPLFVPQ	8	Unmodified	_VPPLFVPQ_					0	0	0		ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.7877502441406	2	448.765646	895.516739	-0.91713	-0.00041158	-3.2219	-0.0014459	-4.139	-0.0018575	448.7639071342734	38.955	0.93148	39.51	38.902	39.834	0.55449					33	21	2	0	0	0	0.4196	1	3259	3259		20.482	0	1	105920			63389	1052	42167	42185	71938	71938					0.06480178253798385
VPPLFVPQ	8	Unmodified	_VPPLFVPQ_					0	0	0		ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	448.765646	895.516739	-1.885	-0.00084594	-3.2504	-0.0014586	-5.1354	-0.0023046	448.7642624015466	39.805	0.38777	39.805	39.584	39.972	0	0.15024	0.00022354	NaN	20.482	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19445			63390	1052	42167	42185							0.06480178253798385
VPPLFVPQ	8	Unmodified	_VPPLFVPQ_					0	0	0		ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	448.765646	895.516739	-1.7206	-0.00077213	-5.4126	-0.002429	-7.1332	-0.0032011	448.76283466806996	39.282	0.17227	39.65	39.557	39.729	0.36797	-0.0048422	-0.0017171	NaN	20.482	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20495			63391	1052	42167	42185							0.06480178253798385
VPPLRIGRYP	10	Unmodified	_VPPLRIGRYP_					0	0	0			REV__ENST00000409682.7_1_2:162164999-162175350:+|nuORF	REV__ENST00000409682.7_1_2:162164999-162175350:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	584.3564453125	2	584.353483	1166.69241	0.8115	0.00047421	3.4456	0.0020134	4.2571	0.0024876	584.3555753434755	92.506	2.8121	92.665	91.311	94.123	0.15874					185	66	3	0	0	0	0.85694	1	9299	9299		21.96	3.6978	1	722410	+		63392	26352	42168	42186	71939	71939					0.11573392767900259
VPPLSPQPKI	10	Unmodified	_VPPLSPQPKI_					0	0	0		ENSG00000173166|ENST00000319170|RAPH1	ENSG00000173166|ENST00000319170|RAPH1	ENSG00000173166|ENST00000319170|RAPH1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3257446289062	2	538.329142	1074.64373	-0.51595	-0.00027775	-2.4109	-0.0012978	-2.9268	-0.0015756	538.3278592314944	105.99	1.6493	105.99	105.37	107.02	0					100	37	3	0	0	0	0.86272	1	11009	11009		24.519	2.5593	1	642860			63393	6835	42169	42187	71940	71940					0.10939479408125408
VPPLVFDWRLR	11	Unmodified	_VPPLVFDWRLR_					0	0	0			REV__ENST00000428024.3_1_1:155209849-155214415:-|nuORF	REV__ENST00000428024.3_1_1:155209849-155214415:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.6080017089844	3	466.60659	1396.79794	2.578	0.0012029	0.52334	0.0002442	3.1013	0.0014471	466.60668985200886	100.48	2.1594	100.43	99.202	101.36	-0.052116					162	50	4	0	0	0	0.78683	1	10981	10981		14.086	1.1285	1	531470	+		63394	25086	42170	42188	71941	71941					0.11541308893492896
VPPPNEFVF	9	Unmodified	_VPPPNEFVF_					0	0	0		ENSG00000162630|ENST00000367434|B3GALT2	ENSG00000162630|ENST00000367434|B3GALT2	ENSG00000162630|ENST00000367434|B3GALT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3036499023438	2	523.271293	1044.52803	0.69406	0.00036318	3.6077	0.0018878	4.3017	0.002251	523.2723480326346	86.299	1.3106	86.448	85.558	86.869	0.14902					39	30	2	0	0	0	0.20789	1	8428	8428		21.96	2.5999	1	64972			63395	5709	42171	42189	71942	71942					0.007549555572722966
VPPPPECVVPI	11	Unmodified	_VPPPPECVVPI_					0	0	0			REV__ENSG00000116183|ENST00000367662|PAPPA2	REV__ENSG00000116183|ENST00000367662|PAPPA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	573.8157958984375	2	573.81501	1145.61547	0.2907	0.00016681	3.2352	0.0018564	3.5259	0.0020232	573.816753391891	35.956	1.0187	36.059	35.47	36.489	0.10306					84	33	4	0	0	0	0.71452	1	1978	1978		29.15	2.4566	1	933610	+		63396	18186	42172	42190	71943	71943					0.04848413436548071
VPPPPRPL	8	Unmodified	_VPPPPRPL_					0	0	0			REV__ENSG00000146281|ENST00000275072|PM20D2	REV__ENSG00000146281|ENST00000275072|PM20D2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2760925292969	2	436.771263	871.527973	1.7437	0.00076159	3.2678	0.0014273	5.0114	0.0021889	436.7728952540282	27.595	1.1661	27.572	27.227	28.393	-0.023556					56	27	3	0	0	0	0.82464	1	1310	1310		21.702	1.2205	1	71535	+		63397	20004	42173	42191	71944	71944					0.08707000347931171
VPPPTDPLPD	10	Unmodified	_VPPPTDPLPD_					0	0	0			REV__nc|ENSG00000100485|Q07890-2|SOS2	REV__nc|ENSG00000100485|Q07890-2|SOS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3030395507812	2	524.27149	1046.52843	0.60088	0.00031502	-1.6708	-0.00087594	-1.0699	-0.00056092	524.2704912871015	86.244	0.64989	86.688	86.367	87.017	0.44331					30	15	3	0	0	0	0.37624	1	10058	10058		26.693	16.428	1	541140	+		63398	17197	42174	42192	71945	71945					0.00702330486478786
VPPRTTTK	8	Unmodified	_VPPRTTTK_					0	0	0		nc|ENSG00000170579|O14490-6|DLGAP1;chr18:3814273-3845232|26|20.85|0.69|4.91|-|ENST00000539435|DLGAP1,DLGAP1;nc|ENSG00000170579|O14490-3|DLGAP1;nc|ENSG00000170579|O14490-2|DLGAP1;nc|ENSG00000170579|O14490-4|DLGAP1;nc|ENSG00000170579|O14490-7|DLGAP1;ENSG00000170579|ENST00000315677|DLGAP1	nc|ENSG00000170579|O14490-6|DLGAP1	nc|ENSG00000170579|O14490-6|DLGAP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.25823974609375	2	450.269084	898.523616	2.5419	0.0011445	1.684	0.00075824	4.2258	0.0019028	450.26966881866	25.965	0.38729	25.534	25.396	25.784	-0.4311					13	8	2	0	0	0	0.4196	1	1387	1387		73.975	16.163	1	65931			63399	252	42175	42193	71946	71946					0.07029491134369437
VPPRTTTK	8	Unmodified	_VPPRTTTK_					0	0	0		nc|ENSG00000170579|O14490-6|DLGAP1;chr18:3814273-3845232|26|20.85|0.69|4.91|-|ENST00000539435|DLGAP1,DLGAP1;nc|ENSG00000170579|O14490-3|DLGAP1;nc|ENSG00000170579|O14490-2|DLGAP1;nc|ENSG00000170579|O14490-4|DLGAP1;nc|ENSG00000170579|O14490-7|DLGAP1;ENSG00000170579|ENST00000315677|DLGAP1	nc|ENSG00000170579|O14490-6|DLGAP1	nc|ENSG00000170579|O14490-6|DLGAP1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	450.269084	898.523616	0.075065	3.3799E-05	-5.3408	-0.0024048	-5.2658	-0.002371	450.2651956734598	25.535	0.083824	25.64	25.574	25.658	0.1054	0.053078	-0.00012888	NaN	73.975	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22543			63400	252	42175	42193							0.07029491134369437
VPPSIRLASSA	11	Unmodified	_VPPSIRLASSA_					0	0	0			REV__ENST00000533210.5_1_8:144649355-144650416:-|nuORF	REV__ENST00000533210.5_1_8:144649355-144650416:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3206176757812	2	549.319306	1096.62406	0.23279	0.00012788	-3.323	-0.0018254	-3.0902	-0.0016975	549.317399054781	100.81	2.4094	101.02	100.5	102.91	0.2058					154	58	4	0	0	0	0.72106	1	10672	10672		28.081	9.8194	1	3004300	+		63401	28338	42176	42194	71947	71947					0.0796110339738334
VPPSKKRPQSK	11	Unmodified	_VPPSKKRPQSK_					0	0	0			REV__nc|ENSG00000213676|Q99941-2|ATF6B	REV__nc|ENSG00000213676|Q99941-2|ATF6B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	417.92236328125	3	417.922578	1250.7459	-0.18602	-7.7743E-05	-0.40229	-0.00016813	-0.58832	-0.00024587	417.92238841616916	105.93	2.7176	105.91	105.18	107.9	-0.025154					268	64	6	0	0	0	0.66929	1	11633	11633		25.892	0	1	19495000	+		63402	23629	42177	42195	71948	71948					0.1305614547973164
VPPTEGLL	8	Unmodified	_VPPTEGLL_					0	0	0			REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2379455566406	2	413.239461	824.46437	-1.8341	-0.00075793	0.52075	0.00021519	-1.3134	-0.00054274	413.23892773409955	77.365	8.6476	77.49	73.747	82.394	0.12485					766	280	4	0	0	0	0.87276	1	7083	7083		29.842	0	1	2012200	+		63403	18064	42178	42196	71949	71949					0.04511595120197853
VPPTEGLL	8	Unmodified	_VPPTEGLL_					0	0	0			REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2380065917969	2	413.239461	824.46437	-1.5467	-0.00063915	0.5911	0.00024426	-0.95558	-0.00039489	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.88915	1	7101	7101		35.201	0	1	1341700	+		63404	18064	42178	42196	71950	71950					0.04511595120197853
VPPTEGLL	8	Unmodified	_VPPTEGLL_					0	0	0			REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2377014160156	2	413.239461	824.46437	0.89927	0.00037161	-3.9864	-0.0016473	-3.0871	-0.0012757	413.23775271826133	77.246	5.6199	77.651	75.794	81.414	0.40531					207	140	2	0	0	0	0.88915	1	8786	8786		35.201	1.6851	1	1083000	+		63405	18064	42178	42196	71951	71951					0.04511595120197853
VPPVKEPSPR	10	Unmodified	_VPPVKEPSPR_					0	0	0			REV__nc|ENSG00000099814|Q9Y4F5-3|CEP170B	REV__nc|ENSG00000099814|Q9Y4F5-3|CEP170B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.3190307617188	2	553.321848	1104.62914	-0.072245	-3.9975E-05	-3.5656	-0.0019729	-3.6378	-0.0020129	553.3197298535018	81.096	1.4868	81.596	81.05	82.537	0.49967					56	36	2	0	0	0	0.81117	1	9379	9379		38.754	2.3069	1	445730	+		63406	17106	42179	42197	71952	71952					0.08101407260005544
VPPYLLISGF	10	Unmodified	_VPPYLLISGF_					0	0	0		ENST00000560219.2_1_15:90321464-90321809:+|nuORF	ENST00000560219.2_1_15:90321464-90321809:+|nuORF	ENST00000560219.2_1_15:90321464-90321809:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.3181762695312	2	553.318243	1104.62193	-0.58703	-0.00032482	3.8026	0.0021041	3.2156	0.0017793	553.3201224343958	81.2	1.5637	81.622	81.018	82.582	0.4215					77	38	3	0	0	0	0.53935	1	9356	9356		53.351	0.41475	1	457090			63407	13817	42180	42198	71953	71953					0.07380674659566466
VPQIAKAF	8	Unmodified	_VPQIAKAF_					0	0	0		nc|ENSG00000132359|Q684P5-3|RAP1GAP2;nc|ENSG00000132359|Q684P5-2|RAP1GAP2;ENSG00000132359|ENST00000254695|RAP1GAP2	nc|ENSG00000132359|Q684P5-3|RAP1GAP2	nc|ENSG00000132359|Q684P5-3|RAP1GAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2655944824219	2	437.263271	872.511988	2.8534	0.0012477	2.2102	0.00096646	5.0637	0.0022142	437.26437856008937	25.561	2.2741	25.13	24.272	26.546	-0.4311					152	51	5	0	0	0	0.81548	1	1256	1256		20.482	0	1	21873000			63408	3787	42181	42199	71954	71954					0.07063294111037521
VPQLKGLG	8	Unmodified	_VPQLKGLG_					0	0	0		LTR16B_dup677|chr19:37736477-37736832:-|1.2651633122408763|0.3034561894388717|2.06|63.0|14|1|anti-sense	LTR16B_dup677|chr19:37736477-37736832:-|1.2651633122408763|0.3034561894388717|2.06|63.0|14|1|anti-sense	LTR16B_dup677|chr19:37736477-37736832:-|1.2651633122408763|0.3034561894388717|2.06|63.0|14|1|anti-sense	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5244140625	2	406.255446	810.496338	0.77322	0.00031413	2.9669	0.0012053	3.7401	0.0015194	406.256541832781	49.488	1.593	49.948	49.184	50.777	0.45983					54	38	2	0	0	0	0.4196	1	4941	4941		4.6817	0	1	217770			63409	14704	42182	42200	71955	71955					0.08351007593989834
VPQPPLMPQPP	11	Unmodified	_VPQPPLMPQPP_					0	0	0			REV__ENSG00000165238|ENST00000427277|WNK2	REV__ENSG00000165238|ENST00000427277|WNK2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8250122070312	2	600.825909	1199.63727	-0.59314	-0.00035637	-1.7322	-0.0010407	-2.3253	-0.0013971	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.66929	1	6860	6860		36.447	1.2947	1	825510	+		63410	21165	42183	42201	71956	71956					0.045432181851310816
VPQSKTISE	9	Unmodified	_VPQSKTISE_					0	0	0			REV__ENSG00000054267|ENST00000264183|ARID4B	REV__ENSG00000054267|ENST00000264183|ARID4B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.740478515625	2	494.769114	987.523675	0.18004	8.9077E-05	0.15899	7.8664E-05	0.33903	0.00016774	494.7688871192013	33.864	0.54085	34.033	33.695	34.236	0.16971					14	12	2	0	0	0	0.20789	1	2477	2477		18.262	0	1	64229	+		63411	16398	42184	42202	71957	71957					0.029414463437319682
VPQVEKLHL	9	Unmodified	_VPQVEKLHL_					0	0	0			REV__nc|ENSG00000170264|Q3B820-2|FAM161A	REV__nc|ENSG00000170264|Q3B820-2|FAM161A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8165893554688	2	531.818941	1061.62333	0.49482	0.00026316	-4.4068	-0.0023436	-3.912	-0.0020805	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.76255	1	10096	10096		35.618	0.41757	1	1227700	+		63412	21640	42185	42203	71958	71958					0.09498308748334239
VPRARRACV	9	Unmodified	_VPRARRACV_					0	0	0			REV__ENST00000204726.7_3_12:133398839-133405145:-|nuORF	REV__ENST00000204726.7_3_12:133398839-133405145:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.2975463867188	2	514.300727	1026.5869	-1.5684	-0.00080663	-3.8358	-0.0019727	-5.4042	-0.0027794	514.2990007980452	96.402	2.2846	96.604	95.027	97.312	0.20242					111	53	3	0	0	0	0.7932	1	9867	9867		24.203	2.2429	1	524360	+		63413	24100	42186	42204	71959	71959					0.07467153370612323
VPRASPALRR	10	Unmodified	_VPRASPALRR_					0	0	0		ENST00000243326.9_1_2:152266596-152266845:+|nuORF	ENST00000243326.9_1_2:152266596-152266845:+|nuORF	ENST00000243326.9_1_2:152266596-152266845:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	561.8458251953125	2	561.846356	1121.67816	0.41142	0.00023115	-1.5307	-0.00086003	-1.1193	-0.00062887	561.8453227320805	96.693	1.8248	96.924	96.437	98.262	0.23103					107	42	4	0	0	0	0.86471	1	9984	9984		30.318	1.1477	1	1323100			63414	9258	42187	42205	71960	71960					0.12218740339585565
VPRCTSYLN	9	Carbamidomethyl (C)	_VPRC(Carbamidomethyl (C))TSYLN_	VPRC(1)TSYLN		VPRC(48)TSYLN		0	1	0		nc|ENSG00000139144|O75747-2|PIK3C2G;chr12:18346836-18371180|22|13.09|0.59|4.47|+|ENST00000433979|PIK3C2G,PIK3C2G;ENSG00000139144|ENST00000538779|PIK3C2G;chr12:18262792-18282004|25|21.64|0.27|6.32|+|ENST00000675017|PIK3C2G,PIK3C2G	nc|ENSG00000139144|O75747-2|PIK3C2G	nc|ENSG00000139144|O75747-2|PIK3C2G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.27392578125	2	555.274041	1108.53353	0.016599	9.2168E-06	-3.4068	-0.0018917	-3.3902	-0.0018825	555.2740240481572	75.662	1.4549	76.057	75.198	76.653	0.39507					89	34	5	0	0	0	0.58668	1	8568	8568		47.657	6.8792	1	647320			63415	124	42188	42206	71961	71961	1				-0.016396889225688938
VPRDLRGG	8	Unmodified	_VPRDLRGG_					0	0	0		chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.25152587890625	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87922	1	7295	7295		31.955	6.5047	1	1788100			63416	549	42189	42207	71962	71962					0.04839453677379879
VPRDLRGG	8	Unmodified	_VPRDLRGG_					0	0	0		chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2513732910156	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.86288	1	7785	7785		26.796	1.3459	1	2823900			63417	549	42189	42207	71963	71963					0.04839453677379879
VPRDLRGG	8	Unmodified	_VPRDLRGG_					0	0	0		chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.2514343261719	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.86288	3	7809	7792;7809;7819		37.159	6.6555	1	3370400			63418	549	42189	42207	71964;71965;71966	71965					0.04839453677379879
VPRDLRGG	8	Unmodified	_VPRDLRGG_					0	0	0		chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2513732910156	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.86288	1	7454	7454		26.796	1.3459	1	3322700			63419	549	42189	42207	71967	71967					0.04839453677379879
VPRDLRGG	8	Unmodified	_VPRDLRGG_					0	0	0		chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	chrX:311627-312780|14|17.5|0.65|4.74|-|0|GTPBP6,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.25164794921875	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.86288	1	7427	7427		26.796	0.10319	1	2494100			63420	549	42189	42207	71968	71968					0.04839453677379879
VPRGAVRD	8	Unmodified	_VPRGAVRD_					0	0	0			REV__ENSG00000087303|ENST00000216286|NID2	REV__ENSG00000087303|ENST00000216286|NID2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2513732910156	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.87922	1	8102	8102		31.955	1.4512	1	3292300	+		63421	16933	42190	42208	71969	71969					0.04839453677379879
VPRGECKF	8	Unmodified	_VPRGECKF_					0	0	0			REV__ENST00000366221.3_2_1:1510630-1510894:+|nuORF	REV__ENST00000366221.3_2_1:1510630-1510894:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.2446594238281	2	468.242012	934.469472	3.3472	0.0015673	2.5086	0.0011746	5.8558	0.0027419	468.24305217377116	104.91	1.7279	105.14	104.51	106.24	0.22681					99	43	3	0	0	0	0.87479	1	12827	12827		30.504	0.18592	1	787100	+		63422	25522	42191	42209	71970	71970					-0.000384242888458175
VPRGLARRPA	10	Unmodified	_VPRGLARRPA_					0	0	0		nc|ENSG00000147434|Q15825-2|CHRNA6;ENSG00000147434|ENST00000276410|CHRNA6	nc|ENSG00000147434|Q15825-2|CHRNA6	nc|ENSG00000147434|Q15825-2|CHRNA6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8397216796875	2	546.841074	1091.66759	0.96702	0.0005288	-2.8806	-0.0015752	-1.9136	-0.0010464	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.85934	1	12284	12284		35.618	7.736	1	9124000			63423	4903	42192	42210	71971	71971					0.12542757685173456
VPRGLRGAS	9	Unmodified	_VPRGLRGAS_					0	0	0			REV__ENST00000389805.8_1_5:179264020-179264074:+|nuORF	REV__ENST00000389805.8_1_5:179264020-179264074:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7721862792969	2	456.772326	911.530098	1.381	0.0006308	-0.41389	-0.00018905	0.96711	0.00044175	456.7715202988468	90.098	2.3552	90.028	88.797	91.153	-0.069977					132	55	5	0	0	0	0.76764	1	9414	9414		34.173	2.2177	1	1094100	+		63424	25999	42193	42211	71972	71972					0.07079429085752054
VPRGLRGAS	9	Unmodified	_VPRGLRGAS_					0	0	0			REV__ENST00000389805.8_1_5:179264020-179264074:+|nuORF	REV__ENST00000389805.8_1_5:179264020-179264074:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7724609375	2	456.772326	911.530098	-1.7558	-0.00080201	2.154	0.00098388	0.39816	0.00018187	456.7729586253597	89.816	2.3334	89.992	88.581	90.914	0.1758					104	54	4	0	0	0	0.69624	1	8940	8940		40.778	7.2626	1	808890	+		63425	25999	42193	42211	71973	71973					0.07079429085752054
VPRGRLLHQ	9	Unmodified	_VPRGRLLHQ_					0	0	0		ENST00000371694.7_1_9:139571467-139571918:-|nuORF	ENST00000371694.7_1_9:139571467-139571918:-|nuORF	ENST00000371694.7_1_9:139571467-139571918:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3263549804688	2	538.327799	1074.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.18	1	115.21	114.71	115.71	0.026466								0	0	0	0.32159	1	12629	12629		23.042	0.0057756	1				63426	10671	42194	42212	71974	71974					0.10671068793840277
VPRGRLLHQ	9	Unmodified	_VPRGRLLHQ_					0	0	0		ENST00000371694.7_1_9:139571467-139571918:-|nuORF	ENST00000371694.7_1_9:139571467-139571918:-|nuORF	ENST00000371694.7_1_9:139571467-139571918:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3270263671875	2	538.327799	1074.64105	-1.4902	-0.00080221	0.37298	0.00020079	-1.1172	-0.00060142	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.78058	3	12273	12273;12723;12734		30.504	2.0956	1	4041000			63427	10671	42194	42212	71975;71976;71977	71975					0.10671068793840277
VPRGVHLR	8	Unmodified	_VPRGVHLR_					0	0	0		nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-2|ADAR;ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-4|ADAR	nc|ENSG00000160710|P55265-3|ADAR	nc|ENSG00000160710|P55265-3|ADAR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.29071044921875	2	467.290685	932.566818	0.090159	4.213E-05	-0.43366	-0.00020264	-0.3435	-0.00016051	467.29038676820915	33.276	0.922	33.445	33.103	34.025	0.16971					54	21	4	0	0	0	0.41376	2	2383	2383;2409		79.939	8.5613	1	2902500			63428	5600	42195	42213	71978;71979	71978					0.09783725702322954
VPRGVHLR	8	Unmodified	_VPRGVHLR_					0	0	0		nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-2|ADAR;ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-4|ADAR	nc|ENSG00000160710|P55265-3|ADAR	nc|ENSG00000160710|P55265-3|ADAR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.29034423828125	2	467.290685	932.566818	0.59956	0.00028017	-0.99923	-0.00046693	-0.39967	-0.00018676	467.29008476451924	33.209	0.96325	33.421	33.102	34.066	0.21168					61	22	4	0	0	0	0.60155	2	2401	2401;2413		71.378	8.3995	1	3366300			63429	5600	42195	42213	71980;71981	71980					0.09783725702322954
VPRHRRRSAS	10	Unmodified	_VPRHRRRSAS_					0	0	0			REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3539428710938	2	611.355411	1220.69627	-0.25907	-0.00015838	1.2938	0.00079097	1.0347	0.00063259	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.8651	1	9260	9260		25.574	0	1	3360200	+		63430	24235	42196	42214	71982	71982					0.09474875314322162
VPRHRRRSAS	10	Unmodified	_VPRHRRRSAS_					0	0	0			REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.354736328125	2	611.355411	1220.69627	-0.22744	-0.00013904	2.0666	0.0012634	1.8392	0.0011244	611.3567637437817	96.238	4.9304	96.238	95.314	100.24	0					351	117	4	0	0	0	0.67571	2	9535	9535;9640		45.972	14.442	1	8715400	+		63431	24235	42196	42214	71983;71984	71983					0.09474875314322162
VPRHRRRSAS	10	Unmodified	_VPRHRRRSAS_					0	0	0			REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.355224609375	2	611.355411	1220.69627	2.4219	0.0014807	-0.88036	-0.00053821	1.5416	0.00094244	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.86471	1	10205	10205		30.318	4.7437	1	12656000	+		63432	24235	42196	42214	71985	71985					0.09474875314322162
VPRHRRRSAS	10	Unmodified	_VPRHRRRSAS_					0	0	0			REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.354736328125	2	611.355411	1220.69627	0.21646	0.00013233	1.3856	0.00084711	1.6021	0.00097944	611.3563351897285	95.931	4.934	95.978	95.006	99.94	0.046982					423	115	6	0	0	0	0.82886	1	10061	10061		37.812	8.6415	1	12399000	+		63433	24235	42196	42214	71986	71986					0.09474875314322162
VPRHRRRSAS	10	Unmodified	_VPRHRRRSAS_					0	0	0			REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3544311523438	2	611.355411	1220.69627	1.1383	0.00069592	-0.26573	-0.00016245	0.8726	0.00053347	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.8545	3	9698	9456;9648;9698		36.447	1.2947	1	7316900	+		63434	24235	42196	42214	71987;71988;71989	71989					0.09474875314322162
VPRHRRRSAS	10	Unmodified	_VPRHRRRSAS_					0	0	0			REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	REV__ENST00000243286.7_1_X:102862879-102862993:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3522338867188	2	611.355411	1220.69627	0.85003	0.00051967	0.086567	5.2923E-05	0.93659	0.00057259	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.8545	2	9668	9459;9668		36.447	3.6343	1	6836400	+		63435	24235	42196	42214	71990;71991	71991					0.09474875314322162
VPRIGRSA	8	Unmodified	_VPRIGRSA_					0	0	0			REV__ENSG00000071677|ENST00000165524|PRLH	REV__ENSG00000071677|ENST00000165524|PRLH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.261474609375	2	428.261594	854.508634	-1.8497	-0.00079216	1.9562	0.00083775	0.10645	4.5588E-05	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.86677	1	9033	9033		27.882	1.0861	1	31323000	+		63436	16627	42197	42215	71992	71992					0.0755604405703707
VPRKPGVF	8	Unmodified	_VPRKPGVF_					0	0	0		ENST00000519685.5_1_8:22873179-22874852:+|nuORF	ENST00000519685.5_1_8:22873179-22874852:+|nuORF	ENST00000519685.5_1_8:22873179-22874852:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2742919921875	2	450.276712	898.538872	-1.247	-0.00056151	-3.0605	-0.0013781	-4.3075	-0.0019396	450.2752637415859	95.005	1.8382	95.236	94.9	96.739	0.23103					104	43	3	0	0	0	0.86791	1	9798	9798		28.254	6.2944	1	829000			63437	13141	42198	42216	71993	71993					0.08554402722234045
VPRKPGVF	8	Unmodified	_VPRKPGVF_					0	0	0		ENST00000519685.5_1_8:22873179-22874852:+|nuORF	ENST00000519685.5_1_8:22873179-22874852:+|nuORF	ENST00000519685.5_1_8:22873179-22874852:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2748718261719	2	450.276712	898.538872	-1.7762	-0.00079979	-2.6214	-0.0011804	-4.3976	-0.0019801	450.2754553460682	113.32	6.698	113.27	113.24	119.94	-0.044777					313	158	2	0	0	0	0.81548	1	12386	12386		20.482	4.0087	1	2494900			63438	13141	42198	42216	71994	71994					0.08554402722234045
VPRKPPSRR	9	Unmodified	_VPRKPPSRR_					0	0	0		ENST00000372242.7_1_1:45101583-45102057:-|nuORF	ENST00000372242.7_1_1:45101583-45102057:-|nuORF	ENST00000372242.7_1_1:45101583-45102057:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8404541015625	2	546.841074	1091.66759	0.96702	0.0005288	-2.8806	-0.0015752	-1.9136	-0.0010464	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.78983	1	12293	12293		27.882	0	1	9124000			63439	10692	42199	42217	71995	71995					0.12542757685173456
VPRKTKDN	8	Unmodified	_VPRKTKDN_					0	0	0			REV__nc|ENSG00000113360|Q9NRR4-2|DROSHA	REV__nc|ENSG00000113360|Q9NRR4-2|DROSHA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27734375	2	479.277441	956.540328	0.63867	0.0003061	-0.7424	-0.00035582	-0.10374	-4.9719E-05	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.87922	1	8162	8162		31.955	1.4512	1	6593200	+		63440	17991	42200	42218	71996	71996					0.06031992020314192
VPRNLLGL	8	Unmodified	_VPRNLLGL_					0	0	0		nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2;ENSG00000143514|ENST00000343537|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	440.292236328125	2	441.281995	880.549437	-0.096036	-4.2379E-05	4.2759	0.0018869	4.1799	0.0018445	441.28281086285136	58.342	0.6004	58.313	57.939	58.539	-0.029865					21	15	2	0	0	0	0.4196	1	5375	5375		26.796	7.4361	1	50647			63441	4640	42201	42219	71997	71997					0.10438385376664883
VPRNLLGL	8	Unmodified	_VPRNLLGL_					0	0	0		nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2;ENSG00000143514|ENST00000343537|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	nc|ENSG00000143514|Q13625-2|TP53BP2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	441.281995	880.549437	-0.74702	-0.00032965	6.2199	0.0027447	5.4729	0.0024151	441.2840854098439	58.264	0.22247	58.254	58.13	58.353	-0.010147	-0.029415	0.00079724	NaN	26.796	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53259			63442	4640	42201	42219							0.10438385376664883
VPRNRLGRTRA	11	Unmodified	_VPRNRLGRTRA_					0	0	0			REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.59759521484375	3	432.597088	1294.76943	-0.96173	-0.00041604	3.3987	0.0014703	2.4369	0.0010542	432.5984432488919	107.49	0.99143	107.49	106.84	107.83	0					54	23	3	0	0	0	0.74763	1	11114	11114		25.892	6.2648	1	9853300	+		63443	25978	42202	42220	71998	71998					0.13384004036925035
VPRNRLGRTRA	11	Unmodified	_VPRNRLGRTRA_					0	0	0			REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3927612304688	2	648.391993	1294.76943	2.6473	0.0017165	-1.2901	-0.00083646	1.3573	0.00088004	648.3910621231973	107.28	1.1649	107.25	106.75	107.91	-0.034134					106	27	4	0	0	0	0.69687	1	11864	11864		22.58	0	1	42480000	+		63444	25978	42202	42220	71999	71999					0.13384004036925035
VPRNRLGRTRA	11	Unmodified	_VPRNRLGRTRA_					0	0	0			REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	648.39306640625	2	648.391993	1294.76943	1.8787	0.0012181	-0.53827	-0.00034901	1.3404	0.00086912	648.3915145457087	107.1	1.2973	107.13	106.67	107.97	0.035622					111	30	4	0	0	0	0.68431	1	11723	11723		18.262	0	1	42934000	+		63445	25978	42202	42220	72000	72000					0.13384004036925035
VPRNRLGRTRA	11	Unmodified	_VPRNRLGRTRA_					0	0	0			REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	432.5977478027344	3	432.597088	1294.76943	2.4108	0.0010429	-0.3913	-0.00016928	2.0195	0.00087363	432.5968710757986	107.1	1.2973	107.13	106.67	107.97	0.035622					60	30	2	0	0	0	0.74763	1	11820	11820		20.315	0	1	18390000	+		63446	25978	42202	42220	72001	72001					0.13384004036925035
VPRNRLGRTRA	11	Unmodified	_VPRNRLGRTRA_					0	0	0			REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	432.59771728515625	3	432.597088	1294.76943	0.73472	0.00031784	1.5705	0.00067938	2.3052	0.00099722	432.59773549861245	107.06	1.3761	107.15	106.64	108.02	0.091263					138	33	6	0	0	0	0.72739	1	11567	11567		24.276	0	1	14015000	+		63447	25978	42202	42220	72002	72002					0.13384004036925035
VPRNRLGRTRA	11	Unmodified	_VPRNRLGRTRA_					0	0	0			REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	REV__ENST00000382363.7_1_22:30774947-30775040:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.5975646972656	3	432.597088	1294.76943	-1.8326	-0.00079276	3.0618	0.0013245	1.2292	0.00053177	432.5983701682112	106.14	0.94881	106.2	105.74	106.69	0.053749					97	22	5	0	0	0	0.72106	1	11253	11253		25.068	9.7347	1	20584000	+		63448	25978	42202	42220	72003	72003					0.13384004036925035
VPRPALRQR	9	Unmodified	_VPRPALRQR_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.8399658203125	2	546.841074	1091.66759	-0.41161	-0.00022509	-2.2056	-0.0012061	-2.6172	-0.0014312	546.8400747085221	101.16	3.89	101.19	100.52	104.41	0.031036					283	93	6	0	0	0	0.76255	1	10803	10803		35.618	3.6634	1	40007000	+		63449	18606	42203	42221	72004	72004					0.12542757685173456
VPRPALRQR	9	Unmodified	_VPRPALRQR_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	546.8399658203125	2	546.841074	1091.66759	0.84844	0.00046396	-3.1925	-0.0017458	-2.3441	-0.0012818	546.8393161807617	100.85	2.6921	100.99	100.42	103.11	0.14352					233	65	5	0	0	0	0.78536	1	10566	10566		29.15	1.2673	1	43597000	+		63450	18606	42203	42221	72005	72005					0.12542757685173456
VPRPALRQR	9	Unmodified	_VPRPALRQR_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.8408203125	2	546.841074	1091.66759	0.96702	0.0005288	-2.8806	-0.0015752	-1.9136	-0.0010464	546.8395389084067	100.57	2.6502	100.87	100.3	102.95	0.2999					173	70	5	0	0	0	0.74721	1	12178	12178		37.159	1.5408	1	9124000	+		63451	18606	42203	42221	72006	72006					0.12542757685173456
VPRPGLCA	8	Unmodified	_VPRPGLCA_					0	0	0			REV__ENST00000486339.6_1_16:2155757-2157078:-|nuORF	REV__ENST00000486339.6_1_16:2155757-2157078:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.7285461425781	2	406.725998	811.437443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.095	1	76.141	75.641	76.641	0.046448								0	0	0	0.29353	1	7427	7427		28.254	9.9299	1		+		63452	27551	42204	42222	72007	72007					0.024182080280183982
VPRPKPTRGI	10	Unmodified	_VPRPKPTRGI_					0	0	0			REV__ENST00000592217.2_1_19:46271832-46273041:+|nuORF	REV__ENST00000592217.2_1_19:46271832-46273041:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3126220703125	2	560.851107	1119.68766	2.6364	0.0014786	-0.086478	-4.8501E-05	2.5499	0.0014301	560.8502356311601	110.45	0.50547	110.5	110.38	110.89	0.054062					28	19	2	0	0	0	0.37624	1	13361	13361		40.778	6.6056	1	119290	+		63453	29208	42205	42223	72008	72008					0.13260508625126022
VPRPKPTRGI	10	Unmodified	_VPRPKPTRGI_					0	0	0			REV__ENST00000592217.2_1_19:46271832-46273041:+|nuORF	REV__ENST00000592217.2_1_19:46271832-46273041:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	560.851107	1119.68766	-1.1566	-0.00064868	1.0608	0.00059496	-0.095789	-5.3723E-05	561.3528590231793	110.66	0.71312	110.6	110.43	111.15	-0.055077	0.044243	0.0024028	NaN	25.574	31	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90512	+		63454	29208	42205	42223							0.13260508625126022
VPRPKPTRGI	10	Unmodified	_VPRPKPTRGI_					0	0	0			REV__ENST00000592217.2_1_19:46271832-46273041:+|nuORF	REV__ENST00000592217.2_1_19:46271832-46273041:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	560.851107	1119.68766	3.126	0.0017532	-3.2741	-0.0018363	-0.14808	-8.3051E-05	561.3503805380047	110.49	0.16175	110.46	110.35	110.52	-0.027641	-0.098437	-0.0024597	NaN	25.574	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72246	+		63455	29208	42205	42223							0.13260508625126022
VPRPKPTRGI	10	Unmodified	_VPRPKPTRGI_					0	0	0			REV__ENST00000592217.2_1_19:46271832-46273041:+|nuORF	REV__ENST00000592217.2_1_19:46271832-46273041:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	560.851107	1119.68766	5.9045	0.0033115	-1.6586	-0.00093024	4.2459	0.0023813	561.3527330495623	110.62	0.1209	110.67	110.61	110.73	0.049095	0.11116	-0.00064758	NaN	25.574	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82704	+		63456	29208	42205	42223							0.13260508625126022
VPRPPPPLA	9	Unmodified	_VPRPPPPLA_					0	0	0			REV__ENSG00000180720|ENST00000682254|CHRM4	REV__ENSG00000180720|ENST00000682254|CHRM4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.2877197265625	2	472.28982	942.565087	-0.38046	-0.00017969	-3.8175	-0.001803	-4.198	-0.0019827	472.28789905059887	95.035	4.0977	95.455	94.933	99.031	0.41963					304	99	5	0	0	0	0.7932	1	11534	11534		25.45	0	1	24731000	+		63457	22412	42206	42224	72009	72009					0.09150671893689832
VPRPRITTCV	10	Unmodified	_VPRPRITTCV_					0	0	0		ENST00000397642.3_1_1:247394123-247394771:+|nuORF	ENST00000397642.3_1_1:247394123-247394771:+|nuORF	ENST00000397642.3_1_1:247394123-247394771:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	571.331298828125	2	571.32915	1140.64375	1.4665	0.00083786	1.7163	0.00098057	3.1828	0.0018184	571.3301291539012	102.21	2.4124	102.26	101.34	103.75	0.043198					126	58	4	0	0	0	0.8505	1	11100	11100		19.104	0.84144	1	2089600			63458	11157	42207	42225	72010	72010					0.07905156136484948
VPRPYELVF	9	Unmodified	_VPRPYELVF_					0	0	0			REV__ENSG00000167165|ENST00000305139|UGT1A6	REV__ENSG00000167165|ENST00000305139|UGT1A6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3402099609375	2	560.313492	1118.61243	2.2649	0.0012691	0.66777	0.00037416	2.9327	0.0016432	560.3136207963648	101.91	0.36264	102.17	102.03	102.4	0.26322					12	8	2	0	0	0	0.20789	1	12391	12391		42.396	0	1	63481	+		63459	21361	42208	42226	72011	72011					0.057869063740326965
VPRRAAAA	8	Unmodified	_VPRRAAAA_					0	0	0		ENST00000594019.5_1_19:47570396-47593253:-|nuORF	ENST00000594019.5_1_19:47570396-47593253:-|nuORF	ENST00000594019.5_1_19:47570396-47593253:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2481994628906	2	406.248486	810.48242	3.1798	0.0012918	-2.835	-0.0011517	0.34482	0.00014008	406.2472019608831	118.01	0.77022	118.03	117.4	118.17	0.026466					37	25	2	0	0	0	0.80706	1	12988	12988		19.36	0	1	37448			63460	14314	42209	42227	72012	72012					0.06959774885547176
VPRRAAAA	8	Unmodified	_VPRRAAAA_					0	0	0		ENST00000594019.5_1_19:47570396-47593253:-|nuORF	ENST00000594019.5_1_19:47570396-47593253:-|nuORF	ENST00000594019.5_1_19:47570396-47593253:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2489318847656	2	406.248486	810.48242	3.1449	0.0012776	-2.7889	-0.001133	0.35606	0.00014465	406.24727030482205	114.56	0.97545	114.57	114.14	115.12	0.0094528					67	46	2	0	0	0	0.81548	1	13781	13781		20.482	0	1	78189			63461	14314	42209	42227	72013	72013					0.06959774885547176
VPRRKRSKPK	10	Unmodified	_VPRRKRSKPK_					0	0	0		ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	ENSG00000055609|ENST00000262189|KMT2C	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.92236328125	3	417.942195	1250.80476	-1.8943	-0.00079172	2.8987	0.0012115	1.0043	0.00041975	417.943397036032	105.36	0.11617	105.44	105.38	105.49	0.073112					4	2	2	0	0	0	0.37624	1	11165	11165		6.001	0	1	58706			63462	1027	42210	42228	72014	72014					0.18938666564713458
VPRRPEMLRSL	11	Unmodified	_VPRRPEMLRSL_					0	0	0		ENST00000473798.1_1_1:762658-762772:-|nuORF	ENST00000473798.1_1_1:762658-762772:-|nuORF	ENST00000473798.1_1_1:762658-762772:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9325256347656	3	451.930968	1352.77107	1.2214	0.000552	2.5381	0.001147	3.7595	0.0016991	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.72892	1	10763	10763		26.75	4.9693	1	1043200			63463	12293	42211	42229	72015	72015					0.10879877010688688
VPRRVIHFV	9	Unmodified	_VPRRVIHFV_					0	0	0		nc|ENSG00000151327|Q8N128|FAM177A1;ENSG00000151327|ENST00000280987|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.8458251953125	2	561.848368	1121.68218	-0.47672	-0.00026785	-4.122	-0.0023159	-4.5987	-0.0025838	561.8459227560618	97.238	1.868	97.238	96.81	98.678	0					92	44	4	0	0	0	0.7932	1	9775	9775		25.45	2.4077	1	643900			63464	5108	42212	42230	72016	72016					0.12620829833326752
VPRRVIHFV	9	Unmodified	_VPRRVIHFV_					0	0	0		nc|ENSG00000151327|Q8N128|FAM177A1;ENSG00000151327|ENST00000280987|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	561.8458251953125	2	561.848368	1121.68218	-1.2102	-0.00067997	-3.3965	-0.0019083	-4.6068	-0.0025883	561.8462778990414	97.077	2.3757	97.139	96.565	98.941	0.062225					142	54	5	0	0	0	0.58151	2	10235	10199;10235		47.916	12.297	1	1718900			63465	5108	42212	42230	72017;72018	72018					0.12620829833326752
VPRSPVLLCKL	11	Unmodified	_VPRSPVLLCKL_					0	0	0		nc|ENSG00000157510|Q8TED9-3|AFAP1L1;ENST00000455574.6_1_5:148651531-148691878:+|nuORF;nc|ENSG00000157510|Q8TED9-2|AFAP1L1;ENSG00000157510|ENST00000296721|AFAP1L1	nc|ENSG00000157510|Q8TED9-3|AFAP1L1	nc|ENSG00000157510|Q8TED9-3|AFAP1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.92218017578125	3	408.921409	1223.7424	3.1807	0.0013007	-1.0639	-0.00043504	2.1168	0.00086562	408.92095568616344	104.57	4.1233	104.61	103.07	107.19	0.039856					288	98	5	0	0	0	0.74763	1	11419	11419		20.315	0	1	4230400			63466	5434	42213	42231	72019	72019					0.13947759381539981
VPRTHRLIT	9	Unmodified	_VPRTHRLIT_					0	0	0		nc|ENSG00000141027|O75376-2|NCOR1;ENSG00000141027|ENST00000268712|NCOR1;ENST00000470782.5_1_17:15935612-15971511:-|nuORF;ENST00000464381.5_1_17:15935612-15961439:-|nuORF	nc|ENSG00000141027|O75376-2|NCOR1	nc|ENSG00000141027|O75376-2|NCOR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8409423828125	2	546.835457	1091.65636	3.386	0.0018516	4.2852	0.0023433	7.6712	0.0041949	546.8379771318001	101.02	3.777	100.97	100.36	104.13	-0.052116					284	90	6	0	0	0	0.48102	1	11226	11226		52.937	3.4952	1	39176000			63467	4476	42214	42232	72020	72020					0.11419935591038666
VPRTLLTLD	9	Unmodified	_VPRTLLTLD_					0	0	0		ENSG00000213445|ENST00000534313|SIPA1	ENSG00000213445|ENST00000534313|SIPA1	ENSG00000213445|ENST00000534313|SIPA1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.3123168945312	2	514.310949	1026.60735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.066	1	17.987	17.487	18.487	-0.078943								0	0	0	0.28772	1	286	286		35.618	0.41757	1				63468	8591	42215	42233	72021	72021					0.09510602511409161
VPRTNPVGVRL	11	Unmodified	_VPRTNPVGVRL_					0	0	0			REV__ENSG00000111271|ENST00000313698|ACAD10	REV__ENSG00000111271|ENST00000313698|ACAD10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.366455078125	2	604.367121	1206.71969	-0.16845	-0.00010181	-0.046458	-2.8078E-05	-0.21491	-0.00012989	604.3669303033663	107.81	0.85171	107.81	107.02	107.87	0					52	20	4	0	0	0	0.76699	1	11158	11158		18.262	0.79408	1	11686000	+		63469	17858	42216	42234	72022	72022					0.12459876308275852
VPRTNPVGVRL	11	Unmodified	_VPRTNPVGVRL_					0	0	0			REV__ENSG00000111271|ENST00000313698|ACAD10	REV__ENSG00000111271|ENST00000313698|ACAD10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3665771484375	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.69248	2	12752	12643;12752		32.751	1.4733	1	5984800	+		63470	17858	42216	42234	72023;72024	72024					0.12459876308275852
VPRTNPVGVRL	11	Unmodified	_VPRTNPVGVRL_					0	0	0			REV__ENSG00000111271|ENST00000313698|ACAD10	REV__ENSG00000111271|ENST00000313698|ACAD10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.366455078125	2	604.367121	1206.71969	3.6458	0.0022034	-4.4074	-0.0026637	-0.76167	-0.00046033	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.74763	1	12807	12807		22.58	0.61977	1	5883900	+		63471	17858	42216	42234	72025	72025					0.12459876308275852
VPRTRLSA	8	Unmodified	_VPRTRLSA_					0	0	0			REV__chr21:25735030-25735487|14|15.86|0.22|6.2|-|0|None,ATP5PF|1	REV__chr21:25735030-25735487|14|15.86|0.22|6.2|-|0|None,ATP5PF|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2744445800781	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.87064	1	9735	9735		29.15	0	1	47650000	+		63472	15786	42217	42235	72026	72026					0.08152313228515595
VPRTRLSA	8	Unmodified	_VPRTRLSA_					0	0	0			REV__chr21:25735030-25735487|14|15.86|0.22|6.2|-|0|None,ATP5PF|1	REV__chr21:25735030-25735487|14|15.86|0.22|6.2|-|0|None,ATP5PF|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2742919921875	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.89494	1	9940	9940		37.159	0	1	51820000	+		63473	15786	42217	42235	72027	72027					0.08152313228515595
VPRTRLSA	8	Unmodified	_VPRTRLSA_					0	0	0			REV__chr21:25735030-25735487|14|15.86|0.22|6.2|-|0|None,ATP5PF|1	REV__chr21:25735030-25735487|14|15.86|0.22|6.2|-|0|None,ATP5PF|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2742004394531	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.87064	1	9761	9761		29.15	0	1	51698000	+		63474	15786	42217	42235	72028	72028					0.08152313228515595
VPRTRLSA	8	Unmodified	_VPRTRLSA_					0	0	0			REV__chr21:25735030-25735487|14|15.86|0.22|6.2|-|0|None,ATP5PF|1	REV__chr21:25735030-25735487|14|15.86|0.22|6.2|-|0|None,ATP5PF|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.274169921875	2	450.274701	898.534849	-1.2506	-0.00056311	0.52833	0.00023789	-0.72226	-0.00032522	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.87064	2	9412	9412;9436		29.15	0	1	44812000	+		63475	15786	42217	42235	72029;72030	72029					0.08152313228515595
VPRTRLSA	8	Unmodified	_VPRTRLSA_					0	0	0			REV__chr21:25735030-25735487|14|15.86|0.22|6.2|-|0|None,ATP5PF|1	REV__chr21:25735030-25735487|14|15.86|0.22|6.2|-|0|None,ATP5PF|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.27459716796875	2	450.274701	898.534849	0.49619	0.00022342	-0.76811	-0.00034586	-0.27192	-0.00012244	450.2742908789494	92.742	1.9986	93.189	92.476	94.475	0.44661					184	49	6	0	0	0	0.87064	1	10993	10993		29.15	0	1	16577000	+		63476	15786	42217	42235	72031	72031					0.08152313228515595
VPRVALLARAR	11	Unmodified	_VPRVALLARAR_					0	0	0			REV__ENST00000576351.5_2_17:3486716-3491620:-|nuORF	REV__ENST00000576351.5_2_17:3486716-3491620:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.9346618652344	3	407.934929	1220.78296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.39	1	117.32	116.82	117.82	-0.07531								0	0	0	0.56276	1	12596	12596		9.6461	3.9474	1		+		63477	28993	42218	42236	72032	72032					0.18139861816166558
VPRVPAYSL	9	Unmodified	_VPRVPAYSL_					0	0	0			REV__ENST00000336095.10_1_20:3913981-3914098:-|nuORF	REV__ENST00000336095.10_1_20:3913981-3914098:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2903747558594	2	501.292559	1000.57057	-0.36653	-0.00018374	-3.8537	-0.0019318	-4.2202	-0.0021156	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.78983	1	8729	8729		27.882	1.1893	1	9903700	+		63478	25176	42219	42237	72033	72033					0.07030350685522535
VPRVRAAS	8	Unmodified	_VPRVRAAS_					0	0	0		ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	428.2615661621094	2	428.261594	854.508634	-1.1356	-0.00048635	1.4339	0.00061408	0.29824	0.00012772	428.2621524287907	91.088	2.5476	91.088	90.477	93.025	0					222	59	5	0	0	0	0.87922	1	8976	8976		31.955	3.7006	1	33233000			63479	14415	42220	42238	72034	72034					0.0755604405703707
VPRVRAAS	8	Unmodified	_VPRVRAAS_					0	0	0		ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	428.2615051269531	2	428.261594	854.508634	-0.17868	-7.6523E-05	0.42452	0.0001818	0.24584	0.00010528	428.26172740855566	90.921	3.3253	90.991	89.601	92.927	0.069328					285	78	5	0	0	0	0.79929	1	9534	9534		18.324	0	1	52688000			63480	14415	42220	42238	72035	72035					0.0755604405703707
VPRVRAAS	8	Unmodified	_VPRVRAAS_					0	0	0		ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	428.26153564453125	2	428.261594	854.508634	-1.6655	-0.00071328	1.873	0.00080211	0.20742	8.8832E-05	428.2623316011841	90.629	3.0865	90.846	89.61	92.696	0.21737					273	73	6	0	0	0	0.89494	1	9296	9296		37.159	6.6555	1	44776000			63481	14415	42220	42238	72036	72036					0.0755604405703707
VPRVRAAS	8	Unmodified	_VPRVRAAS_					0	0	0		ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.2615966796875	2	428.261594	854.508634	-1.8497	-0.00079216	1.9562	0.00083775	0.10645	4.5588E-05	428.2623542950304	90.692	2.5033	90.872	90.262	92.765	0.18028					225	59	5	0	0	0	0.87479	1	9142	9142		30.504	1.3541	1	31323000			63482	14415	42220	42238	72037	72037					0.0755604405703707
VPRVRAAS	8	Unmodified	_VPRVRAAS_					0	0	0		ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	ENST00000602806.1_1_1:226271519-226271639:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.2615966796875	2	428.261594	854.508634	-1.021	-0.00043726	1.2368	0.00052966	0.21577	9.2404E-05	428.26203928148993	90.556	2.3584	91.026	90.524	92.882	0.47068					198	56	5	0	0	0	0.87479	1	10809	10809		30.504	6.3009	1	38446000			63483	14415	42220	42238	72038	72038					0.0755604405703707
VPRVRVSS	8	Unmodified	_VPRVRVSS_					0	0	0			REV__ENSG00000204131|ENST00000633930|NHSL2	REV__ENSG00000204131|ENST00000633930|NHSL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.27484130859375	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.87064	1	9627	9627		29.15	2.3535	1	41438000	+		63484	23461	42221	42239	72039	72039					0.08152313228526964
VPRVVAEYL	9	Unmodified	_VPRVVAEYL_					0	0	0		ENSG00000055950|ENST00000318364|MRPL43;nc|ENSG00000055950|Q8N983-3|MRPL43;nc|ENSG00000055950|Q8N983-2|MRPL43;nc|ENSG00000055950|Q8N983|MRPL43;nc|ENSG00000055950|Q8N983-6|MRPL43;nc|ENSG00000055950|Q8N983-7|MRPL43	ENSG00000055950|ENST00000318364|MRPL43	ENSG00000055950|ENST00000318364|MRPL43	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3040161132812	2	523.305667	1044.59678	-1.5391	-0.00080541	-2.1942	-0.0011482	-3.7333	-0.0019536	523.3043931360254	91.382	2.3991	91.563	91.237	93.636	0.18029					145	56	4	0	0	0	0.78058	1	9173	9173		30.504	2.4222	1	1040100			63485	1031	42222	42240	72040	72040					0.0762661985700106
VPRWGSGIKE	10	Unmodified	_VPRWGSGIKE_					0	0	0		ENST00000498589.1_3_22:22015281-22024373:+|nuORF;ENST00000496819.1_1_22:22020358-22024373:+|nuORF	ENST00000498589.1_3_22:22015281-22024373:+|nuORF	ENST00000498589.1_3_22:22015281-22024373:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.8116455078125	2	564.811648	1127.60874	-1.1972	-0.0006762	0.90264	0.00050982	-0.29457	-0.00016638	564.8121636275911	46.856	0.54027	46.856	46.535	47.075	0					20	12	2	0	0	0	0.67571	1	3567	3567		45.972	1.5951	1	164290			63486	12795	42223	42241	72041	72041					0.050042366001889604
VPSATVLLI	9	Unmodified	_VPSATVLLI_					0	0	0			REV__ENSG00000121350|ENST00000240651|PYROXD1	REV__ENSG00000121350|ENST00000240651|PYROXD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.791015625	2	456.791861	911.569169	-0.092831	-4.2405E-05	1.6943	0.00077396	1.6015	0.00073156	456.792474958444	41.251	1.138	41.206	40.614	41.752	-0.045471					60	36	2	0	0	0	0.69914	1	2730	2730		40.573	0	1	309120	+		63487	18452	42224	42242	72042	72042					0.10984716596760791
VPSAVLIVA	9	Unmodified	_VPSAVLIVA_					0	0	0		ENSG00000162191|ENST00000301935|UBXN1;ENST00000294119.6_1_11:62444064-62444232:-|nuORF	ENSG00000162191|ENST00000301935|UBXN1	ENSG00000162191|ENST00000301935|UBXN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.77880859375	2	434.778754	867.542954	-1.6399	-0.00071298	4.0882	0.0017774	2.4483	0.0010645	434.7804060898041	41.433	2.1783	41.437	40.567	42.745	0.0043983					211	68	4	0	0	0	0.7932	1	2630	2630		26.796	0	1	2524800			63488	5672	42225	42243	72043	72043					0.10388447425293634
VPSDFFLI	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VPSDFFLI_					1	0	0		ENST00000464794.5_1_13:114240403-114240448:+|nuORF	ENST00000464794.5_1_13:114240403-114240448:+|nuORF	ENST00000464794.5_1_13:114240403-114240448:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	490.2581481933594	2	490.260394	978.506234	-0.7686	-0.00037682	-4.0379	-0.0019796	-4.8065	-0.0023565	490.2582311851216	107.58	0.88774	107.58	106.84	107.73	0					59	20	4	0	0	0	0.9159	1	11187	11187		44.531	9.3304	1	787300			63489	12097	42226	42244	72044	72044					0.016121508087280745
VPSDHIRSI	9	Unmodified	_VPSDHIRSI_					0	0	0			REV__ENST00000472828.1_1_2:179695251-179701862:-|nuORF	REV__ENST00000472828.1_1_2:179695251-179701862:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.282470703125	2	512.282723	1022.55089	-0.82606	-0.00042318	0.86948	0.00044542	0.043417	2.2242E-05	512.2830036162308	34.015	0.59412	34.018	33.833	34.427	0.0026054					21	12	2	0	0	0	0.76764	1	2070	2070		34.173	4.331	1	44458	+		63490	27269	42227	42245	72045	72045					0.0405197467475773
VPSDHIRSI	9	Unmodified	_VPSDHIRSI_					0	0	0			REV__ENST00000472828.1_1_2:179695251-179701862:-|nuORF	REV__ENST00000472828.1_1_2:179695251-179701862:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	512.282723	1022.55089	-0.24543	-0.00012573	0.32779	0.00016792	0.082368	4.2196E-05	512.2825483720893	34.208	0.75494	34.152	33.785	34.54	-0.056381	0.076929	-0.00043031	NaN	34.173	27	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50719	+		63491	27269	42227	42245							0.0405197467475773
VPSDKERGL	9	Unmodified	_VPSDKERGL_					0	0	0		ENSG00000148803|ENST00000278025|FUOM;ENST00000478895.1_1_10:135169240-135170497:-|nuORF;nc|ENSG00000148803|A2VDF0-2|FUOM	ENSG00000148803|ENST00000278025|FUOM	ENSG00000148803|ENST00000278025|FUOM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.7742919921875	2	500.774731	999.534909	0.35117	0.00017586	-0.43768	-0.00021918	-0.086516	-4.3325E-05	500.77440458512547	50.648	0.53051	50.698	50.372	50.903	0.049896					40	17	3	0	0	0	0.51307	1	3976	3976		51.335	1.7994	1	218880			63492	4983	42228	42246	72046	72046					0.03512268437862076
VPSGKVLVL	9	Unmodified	_VPSGKVLVL_					0	0	0		nc|ENSG00000204520|Q29983-2|MICA;ENSG00000204520|ENST00000449934|MICA;nc|ENSG00000204520|Q29983|MICA	nc|ENSG00000204520|Q29983-2|MICA	nc|ENSG00000204520|Q29983-2|MICA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.3011779785156	2	456.299853	910.585153	0.82269	0.00037539	2.1236	0.000969	2.9463	0.0013444	456.30067401982916	32.79	1.601	33.001	32.465	34.066	0.21168					118	37	4	0	0	0	0.78536	1	2398	2398		29.15	0	1	2892400			63493	8452	42229	42247	72047	72047					0.1262842283365444
VPSGLRGRPL	10	Unmodified	_VPSGLRGRPL_					0	0	0			REV__ENST00000394957.7_1_10:73510421-73510637:-|nuORF	REV__ENST00000394957.7_1_10:73510421-73510637:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3041381835938	2	526.322183	1050.62981	0.2771	0.00014584	4.4092	0.0023206	4.6863	0.0024665	526.3243816217743	52.925	2.2884	52.943	51	53.288	0.017487					88	56	2	0	0	0	0.37624	1	4618	4618		32.812	1.2826	1	98644	+		63494	26095	42230	42248	72048	72048					0.10652246699692114
VPSIPLKP	8	Unmodified	_VPSIPLKP_					0	0	0		ENST00000494757.5_1_17:38434480-38434561:+|nuORF	ENST00000494757.5_1_17:38434480-38434561:+|nuORF	ENST00000494757.5_1_17:38434480-38434561:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.59454345703125	2	425.773471	849.53239	-0.47516	-0.00020231	0.032707	1.3926E-05	-0.44245	-0.00018838	425.77402480891027	33.639	0.57321	33.583	33.25	33.823	-0.056385					17	12	2	0	0	0	0.4196	1	2049	2049		37.159	0	1	47759			63495	12755	42231	42249	72049	72049					0.10160464770854105
VPSKKSPS	8	Unmodified	_VPSKKSPS_					0	0	0			REV__ENSG00000054118|ENST00000354618|THRAP3	REV__ENSG00000054118|ENST00000354618|THRAP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2452697753906	2	415.242535	828.470518	2.5965	0.0010782	2.9987	0.0012452	5.5952	0.0023234	415.2437470423347	107.1	0.79471	107.2	106.82	107.62	0.10395					75	27	5	0	0	0	0.86288	1	13078	13078		26.796	0	1	2535100	+		63496	16395	42232	42250	72050	72050					0.049421133517171256
VPSKKSPS	8	Unmodified	_VPSKKSPS_					0	0	0			REV__ENSG00000054118|ENST00000354618|THRAP3	REV__ENSG00000054118|ENST00000354618|THRAP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.24591064453125	2	415.242535	828.470518	4.5254	0.0018791	0.48844	0.00020282	5.0138	0.0020819	415.2428634068345	107.07	0.82995	107.22	106.81	107.64	0.14929					51	28	3	0	0	0	0.87479	1	13084	13084		30.504	2.2494	1	2111700	+		63497	16395	42232	42250	72051	72051					0.049421133517171256
VPSKKSPS	8	Unmodified	_VPSKKSPS_					0	0	0			REV__ENSG00000054118|ENST00000354618|THRAP3	REV__ENSG00000054118|ENST00000354618|THRAP3	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	415.242535	828.470518	-0.96211	-0.00039951	4.6875	0.0019464	3.7254	0.0015469	415.24498498526435	107.31	0.67239	107.31	106.98	107.65	0	0.082826	0.00083733	NaN	30.504	41	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	580810	+		63498	16395	42232	42250							0.049421133517171256
VPSKKSPS	8	Unmodified	_VPSKKSPS_					0	0	0			REV__ENSG00000054118|ENST00000354618|THRAP3	REV__ENSG00000054118|ENST00000354618|THRAP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	415.242535	828.470518	-0.18605	-7.7254E-05	4.1271	0.0017138	3.9411	0.0016365	415.24454869042137	107.37	0.79777	107.33	106.9	107.7	-0.034409	0.10407	0.00037199	NaN	30.504	34	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	571240	+		63499	16395	42232	42250							0.049421133517171256
VPSKKSPS	8	Unmodified	_VPSKKSPS_					0	0	0			REV__ENSG00000054118|ENST00000354618|THRAP3	REV__ENSG00000054118|ENST00000354618|THRAP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	415.242535	828.470518	2.7181	0.0011287	0.93873	0.0003898	3.6569	0.0015185	415.2433893421943	107.32	0.75289	107.28	106.97	107.72	-0.034134	0.053102	-0.0022759	NaN	30.504	41	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	538010	+		63500	16395	42232	42250							0.049421133517171256
VPSKKSPS	8	Unmodified	_VPSKKSPS_					0	0	0			REV__ENSG00000054118|ENST00000354618|THRAP3	REV__ENSG00000054118|ENST00000354618|THRAP3	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	415.242535	828.470518	3.1803	0.0013206	1.0926	0.00045371	4.273	0.0017743	415.243171058059	107.16	1.326	107.19	106.32	107.65	0.035622	-0.038169	-0.0021481	NaN	30.504	45	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	387360	+		63501	16395	42232	42250							0.049421133517171256
VPSKKSPS	8	Unmodified	_VPSKKSPS_					0	0	0			REV__ENSG00000054118|ENST00000354618|THRAP3	REV__ENSG00000054118|ENST00000354618|THRAP3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	415.242535	828.470518	-1.786	-0.00074162	6.7124	0.0027873	4.9264	0.0020456	415.2453640392915	106.99	0.75294	107.12	106.81	107.57	0.13867	-0.10606	0.002519	NaN	30.504	38	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	852220	+		63502	16395	42232	42250							0.049421133517171256
VPSKKSPS	8	Unmodified	_VPSKKSPS_					0	0	0			REV__ENSG00000054118|ENST00000354618|THRAP3	REV__ENSG00000054118|ENST00000354618|THRAP3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	415.242535	828.470518	0.734	0.00030479	4.4059	0.0018295	5.1399	0.0021343	415.24429019945956	107.11	0.76784	107.2	106.87	107.63	0.091255	-0.026355	0.00060345	NaN	30.504	36	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1057500	+		63503	16395	42232	42250							0.049421133517171256
VPSKKSPS	8	Unmodified	_VPSKKSPS_					0	0	0			REV__ENSG00000054118|ENST00000354618|THRAP3	REV__ENSG00000054118|ENST00000354618|THRAP3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	415.242535	828.470518	-1.9049	-0.00079098	6.2317	0.0025877	4.3268	0.0017967	415.2454936340217	107.17	0.81598	107.21	106.85	107.67	0.036125	-0.024195	0.0021198	NaN	30.504	47	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1011500	+		63504	16395	42232	42250							0.049421133517171256
VPSLAGPKKRV	11	Unmodified	_VPSLAGPKKRV_					0	0	0			REV__nc|ENSG00000102858|O60291|MGRN1	REV__nc|ENSG00000102858|O60291|MGRN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.369140625	2	576.36659	1150.71863	0.52808	0.00030437	3.353	0.0019326	3.8811	0.0022369	576.368351063032	43.383	1.3544	43.388	42.868	44.222	0.0057526					70	33	3	0	0	0	0.7144	1	2970	2970		29.17	2.4771	1	281870	+		63505	17363	42233	42251	72052	72052					0.14929661939368088
VPSLAGPKKRV	11	Unmodified	_VPSLAGPKKRV_					0	0	0			REV__nc|ENSG00000102858|O60291|MGRN1	REV__nc|ENSG00000102858|O60291|MGRN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3682250976562	2	576.36659	1150.71863	0.40327	0.00023243	4.128	0.0023792	4.5312	0.0026116	576.368883101007	47.95	0.92105	47.987	47.828	48.749	0.037735					46	25	2	0	0	0	0.74763	1	3625	3625		22.58	2.5829	1	117900	+		63506	17363	42233	42251	72053	72053					0.14929661939368088
VPSLAGPKKRV	11	Unmodified	_VPSLAGPKKRV_					0	0	0			REV__nc|ENSG00000102858|O60291|MGRN1	REV__nc|ENSG00000102858|O60291|MGRN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.3692016601562	2	576.36659	1150.71863	0.16825	9.6976E-05	3.9929	0.0023014	4.1612	0.0023984	576.3687345088138	44.787	1.7768	44.718	44.033	45.809	-0.06863					89	43	3	0	0	0	0.70737	1	3193	3193		30.318	8.3578	1	271250	+		63507	17363	42233	42251	72054	72054					0.14929661939368088
VPSLAGPKKRV	11	Unmodified	_VPSLAGPKKRV_					0	0	0			REV__nc|ENSG00000102858|O60291|MGRN1	REV__nc|ENSG00000102858|O60291|MGRN1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	576.36659	1150.71863	-1.1155	-0.00064292	5.7411	0.003309	4.6256	0.002666	576.3697850145646	47.952	1.432	47.952	47.668	49.1	0	-0.00072873	0.00090251	NaN	22.58	69	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133540	+		63508	17363	42233	42251							0.14929661939368088
VPSLAGPKKRV	11	Unmodified	_VPSLAGPKKRV_					0	0	0			REV__nc|ENSG00000102858|O60291|MGRN1	REV__nc|ENSG00000102858|O60291|MGRN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	576.36659	1150.71863	-0.50179	-0.00028922	5.3319	0.0030731	4.8301	0.0027839	576.3694126458677	48.027	0.755	48.002	47.732	48.487	-0.025112	0.049191	0.00043083	NaN	22.58	37	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	169300	+		63509	17363	42233	42251							0.14929661939368088
VPSLAGPKKRV	11	Unmodified	_VPSLAGPKKRV_					0	0	0			REV__nc|ENSG00000102858|O60291|MGRN1	REV__nc|ENSG00000102858|O60291|MGRN1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	576.36659	1150.71863	0.53459	0.00030812	4.2111	0.0024271	4.7457	0.0027352	576.3688567171852	48.008	0.78574	48.03	47.749	48.534	0.022274	0.077583	-0.00086115	NaN	22.58	30	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141450	+		63510	17363	42233	42251							0.14929661939368088
VPSLAGPKKRV	11	Unmodified	_VPSLAGPKKRV_					0	0	0			REV__nc|ENSG00000102858|O60291|MGRN1	REV__nc|ENSG00000102858|O60291|MGRN1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	576.36659	1150.71863	0.40327	0.00023243	4.128	0.0023792	4.5312	0.0026116	576.368883101007	47.95	0.92105	47.987	47.828	48.749	0.037735	0.034694	-0.00095698	NaN	22.58	46	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	117900	+		63511	17363	42233	42251							0.14929661939368088
VPSLAGPKKRV	11	Unmodified	_VPSLAGPKKRV_					0	0	0			REV__nc|ENSG00000102858|O60291|MGRN1	REV__nc|ENSG00000102858|O60291|MGRN1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	576.36659	1150.71863	0.050656	2.9196E-05	4.5325	0.0026124	4.5832	0.0026416	576.369074490594	47.885	0.90438	47.792	47.615	48.519	-0.093178	-0.16074	-0.00049063	NaN	22.58	40	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	225890	+		63512	17363	42233	42251							0.14929661939368088
VPSLVQIAM	9	Unmodified	_VPSLVQIAM_					0	0	0		ENST00000446760.2_1:146412138-146412798:+|nuORF	ENST00000446760.2_1:146412138-146412798:+|nuORF	ENST00000446760.2_1:146412138-146412798:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27740478515625	2	479.275521	956.536489	0.83201	0.00039876	3.0426	0.0014583	3.8747	0.001857	479.2768900497963	84.362	6.9051	84.293	82.925	89.83	-0.069313					542	161	6	0	0	0	0.77546	1	8740	8740		31.955	2.8053	1	7289200			63513	11838	42234	42252	72055	72055					0.05648186202256511
VPSLVSVVI	9	Unmodified	_VPSLVSVVI_					0	0	0		nc|ENSG00000189056|P78509-3|RELN;nc|ENSG00000189056|P78509-2|RELN;ENSG00000189056|ENST00000428762|RELN	nc|ENSG00000189056|P78509-3|RELN	nc|ENSG00000189056|P78509-3|RELN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	456.7910461425781	2	456.791861	911.569169	-1.7139	-0.00078289	4.4589	0.0020368	2.745	0.0012539	456.79378013924514	50.305	3.262	50.305	48.858	52.12	0					185	81	4	0	0	0	0.7932	1	3915	3915		18.324	0	1	186860			63514	7984	42235	42253	72056	72056					0.10984716596760791
VPSMGIGLVK	10	Unmodified	_VPSMGIGLVK_					0	0	0		ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.7992248535156	2	500.79662	999.578688	0.96702	0.00048428	2.2767	0.0011401	3.2437	0.0016244	500.7979456481203	28.756	0.42545	28.582	28.334	28.76	-0.17336					17	10	2	0	0	0	0.86589	1	1769	1769		29.15	0	1	121310			63515	5096	42236	42254	72057	72057					0.07888161610651423
VPSNLLLL	8	Unmodified	_VPSNLLLL_					0	0	0		ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7807312011719	2	434.778754	867.542954	-0.097946	-4.2585E-05	2.9953	0.0013023	2.8973	0.0012597	434.7799034741548	53.402	2.1549	53.397	52.578	54.733	-0.0053673					128	65	3	0	0	0	0.84341	1	4760	4760		24.203	0	1	357680			63516	3506	42237	42255	72058	72058					0.10388447425293634
VPSNLLLL	8	Unmodified	_VPSNLLLL_					0	0	0		ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.77960205078125	2	434.778754	867.542954	-0.52026	-0.0002262	3.3297	0.0014477	2.8095	0.0012215	434.78008033903114	55.345	1.972	55.318	54.208	56.18	-0.027275					116	58	3	0	0	0	0.86288	1	4963	4963		26.796	3.7594	1	290730			63517	3506	42237	42255	72059	72059					0.10388447425293634
VPSNLLLL	8	Unmodified	_VPSNLLLL_					0	0	0		ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7800598144531	2	434.778754	867.542954	-0.26455	-0.00011502	3.3805	0.0014698	3.116	0.0013548	434.78009451569284	64.486	2.8956	64.451	62.552	65.447	-0.034248					175	107	3	0	0	0	0.81548	1	6211	6211		20.482	0	1	198960			63518	3506	42237	42255	72060	72060					0.10388447425293634
VPSNLLLL	8	Unmodified	_VPSNLLLL_					0	0	0		ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.7804260253906	2	434.778754	867.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.581	1	57.551	57.051	58.051	-0.029865								0	0	0	0.29344	1	5317	5317		31.955	0	1				63519	3506	42237	42255	72061	72061					0.10388447425293634
VPSNLLLL	8	Unmodified	_VPSNLLLL_					0	0	0		ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7796630859375	2	434.778754	867.542954	1.0771	0.00046829	1.5251	0.00066307	2.6021	0.0011314	434.77937950289305	55.096	1.7211	55.123	54.502	56.224	0.027138					70	48	2	0	0	0	0.86288	1	5007	5007		26.796	0	1	299790			63520	3506	42237	42255	72062	72062					0.10388447425293634
VPSNLLLL	8	Unmodified	_VPSNLLLL_					0	0	0		ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.77978515625	2	434.778754	867.542954	-0.86763	-0.00037723	3.3995	0.001478	2.5319	0.0011008	434.78009785486137	45.83	1.5338	46.301	45.603	47.137	0.47139					107	37	4	0	0	0	0.86288	1	4367	4367		26.796	0	1	3309700			63521	3506	42237	42255	72063	72063					0.10388447425293634
VPSNLLLL	8	Unmodified	_VPSNLLLL_					0	0	0		ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.28497314453125	2	434.778754	867.542954	-0.98445	-0.00042802	3.9706	0.0017263	2.9862	0.0012983	434.78048784190923	57.101	1.7659	57.497	56.72	58.486	0.39672					70	42	2	0	0	0	0.4196	1	5870	5870		31.955	14.59	1	406690			63522	3506	42237	42255	72064	72064					0.10388447425293634
VPSNLLLL	8	Unmodified	_VPSNLLLL_					0	0	0		ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	ENSG00000127533|ENST00000248076|F2RL3	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	434.778754	867.542954	0.3472	0.00015096	2.9279	0.001273	3.2751	0.0014239	434.7798661477991	57.409	1.7664	57.515	56.855	58.622	0.10549	0.013846	-0.0003976	NaN	31.955	154	83	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	409330			63523	3506	42237	42255							0.10388447425293634
VPSPLAKL	8	Unmodified	_VPSPLAKL_					0	0	0			REV__nc|ENSG00000122678|Q9NP87-2|POLM	REV__nc|ENSG00000122678|Q9NP87-2|POLM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76702880859375	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.80706	1	2575	2575		19.36	0	1	2034000	+		63524	18508	42238	42256	72065	72065					0.09792178253815109
VPSPLAKL	8	Unmodified	_VPSPLAKL_					0	0	0			REV__nc|ENSG00000122678|Q9NP87-2|POLM	REV__nc|ENSG00000122678|Q9NP87-2|POLM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.7669372558594	2	412.765646	823.516739	0.0029651	1.2239E-06	4.3428	0.0017925	4.3457	0.0017938	412.7672251340711	46.501	1.4809	46.972	46.254	47.735	0.47139					61	35	3	0	0	0	0.79929	1	4389	4389		18.324	0	1	936710	+		63525	18508	42238	42256	72066	72066					0.09792178253815109
VPSPMVEYINN	11	Unmodified	_VPSPMVEYINN_					0	0	0			REV__ENSG00000186567|ENST00000358777|CEACAM19	REV__ENSG00000186567|ENST00000358777|CEACAM19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	631.8075561523438	2	631.807913	1261.60127	-0.21418	-0.00013532	0.28768	0.00018176	0.073504	4.644E-05	631.8081718479416	30.832	0.5972	30.785	30.497	31.094	-0.047062					23	15	2	0	0	0	0.69995	1	1704	1704		31.53	1.2121	1	30988	+		63526	22864	42239	42257	72067	72067					-0.019062837823867085
VPSPQFLP	8	Unmodified	_VPSPQFLP_					0	0	0		ENST00000566034.1_1_16:1032836-1032911:+|nuORF	ENST00000566034.1_1_16:1032836-1032911:+|nuORF	ENST00000566034.1_1_16:1032836-1032911:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.74468994140625	2	442.747453	883.480354	-1.7989	-0.00079646	-4.2577	-0.0018851	-6.0566	-0.0026815	442.7455363833493	89.31	0.69753	89.482	89.168	89.866	0.17234					44	15	4	0	0	0	0.92973	1	8860	8860		50.025	2.1089	1	882250			63527	13928	42240	42258	72068	72068					0.0339530135709083
VPSPSPSVRKR	11	Unmodified	_VPSPSPSVRKR_					0	0	0		nc|ENSG00000090006|Q8N2S1-3|LTBP4;nc|ENSG00000090006|Q8N2S1|LTBP4	nc|ENSG00000090006|Q8N2S1-3|LTBP4	nc|ENSG00000090006|Q8N2S1-3|LTBP4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.23272705078125	3	403.906928	1208.69895	0.59258	0.00023935	3.9532	0.0015967	4.5458	0.0018361	404.24279827870356	85.05	0.17354	85.198	85.123	85.297	0.14857					5	3	2	0	0	0	0.1745	1	8300	8300		29.551	23.23	1	71927			63528	14798	42241	42259	72069	72069					0.10295285928600606
VPSRPRGG	8	Unmodified	_VPSRPRGG_					0	0	0		ENST00000429770.5_2_3:50402382-50403264:-|nuORF;ENST00000483620.1_1_3:50402099-50403170:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2380065917969	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.884	1	7135	7135		33.516	3.674	1	1341700			63529	11615	42242	42260	72070	72070					0.04243184505912723
VPSRPRGG	8	Unmodified	_VPSRPRGG_					0	0	0		ENST00000429770.5_2_3:50402382-50403264:-|nuORF;ENST00000483620.1_1_3:50402099-50403170:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	ENST00000429770.5_2_3:50402382-50403264:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2382507324219	2	413.238119	824.461684	-0.091267	-3.7715E-05	0.27761	0.00011472	0.18635	7.7005E-05	413.2381636817735	76.804	5.8245	77.373	76.03	81.854	0.56836					271	145	2	0	0	0	0.92457	1	8655	8655		47.916	10.756	1	1247200			63530	11615	42242	42260	72071	72071					0.04243184505912723
VPSSLCLGLL	10	Unmodified	_VPSSLCLGLL_					0	0	0			REV__ENST00000229239.9_1_12:6643106-6643487:+|nuORF	REV__ENST00000229239.9_1_12:6643106-6643487:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2903747558594	2	501.288628	1000.5627	-0.064942	-3.2555E-05	3.6163	0.0018128	3.5513	0.0017802	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.86589	1	8517	8517		29.15	0	1	2854100	+		63531	24189	42243	42261	72072	72072					0.06244455373735036
VPSSLCLGLL	10	Unmodified	_VPSSLCLGLL_					0	0	0			REV__ENST00000229239.9_1_12:6643106-6643487:+|nuORF	REV__ENST00000229239.9_1_12:6643106-6643487:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.290283203125	2	501.288628	1000.5627	0.65623	0.00032896	2.7707	0.0013889	3.4269	0.0017179	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.86589	1	8130	8130		29.15	1.2673	1	2931000	+		63532	24189	42243	42261	72073	72073					0.06244455373735036
VPSSLCLGLL	10	Unmodified	_VPSSLCLGLL_					0	0	0			REV__ENST00000229239.9_1_12:6643106-6643487:+|nuORF	REV__ENST00000229239.9_1_12:6643106-6643487:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.29058837890625	2	501.288628	1000.5627	-0.28392	-0.00014233	3.869	0.0019395	3.5851	0.0017972	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.81018	1	9909	9909		38.806	0.99462	1	9038000	+		63533	24189	42243	42261	72074	72074					0.06244455373735036
VPSSLLPV	8	Unmodified	_VPSSLLPV_					0	0	0			REV__ENSG00000197563|ENST00000640252|PIGN	REV__ENSG00000197563|ENST00000640252|PIGN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24853515625	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.884	1	9094	9094		33.516	5.2613	1	50007000	+		63534	23245	42244	42262	72075	72075					0.07228185499855044
VPSSNNPH	8	Unmodified	_VPSSNNPH_					0	0	0			REV__ENSG00000163464|ENST00000295683|CXCR1	REV__ENSG00000163464|ENST00000295683|CXCR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2023620605469	2	426.203941	850.39333	-0.12894	-5.4956E-05	-4.1821	-0.0017824	-4.311	-0.0018374	426.2020164864717	81.871	1.0375	82.298	81.962	83	0.42646					55	25	3	0	0	0	0.91977	1	9455	9455		45.952	3.5558	1	1144500	+		63535	20918	42245	42263	72076	72076					-0.037851048646189156
VPSSPPTK	8	Unmodified	_VPSSPPTK_					0	0	0		ENSG00000156140|ENST00000286657|ADAMTS3	ENSG00000156140|ENST00000286657|ADAMTS3	ENSG00000156140|ENST00000286657|ADAMTS3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.7293701171875	2	406.729261	811.443968	-1.8366	-0.00074698	-0.93352	-0.00037969	-2.7701	-0.0011267	406.7287979203731	76.234	2.0799	76.359	74.725	76.805	0.12485					97	60	2	0	0	0	0.89962	1	7096	7096		38.806	6.8513	1	145690			63536	5363	42246	42264	72077	72077					0.030704244603725783
VPSSPVGLL	9	Unmodified	_VPSSPVGLL_					0	0	0		ENST00000586299.1_1_17:76674036-76674234:-|nuORF	ENST00000586299.1_1_17:76674036-76674234:-|nuORF	ENST00000586299.1_1_17:76674036-76674234:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	434.76141357421875	2	434.760561	867.506569	0.15252	6.6311E-05	1.8637	0.00081025	2.0162	0.00087656	434.760660552279	87.036	1.2069	87.482	87.061	88.268	0.44628					53	28	4	0	0	0	0.69914	2	10220	10220;10246		40.573	1.7665	1	1015900			63537	14163	42247	42265	72078;72079	72078					0.06751570528592765
VPSSRLQCSC	10	Carbamidomethyl (C)	_VPSSRLQCSC(Carbamidomethyl (C))_	VPSSRLQC(0.042)SC(0.958)		VPSSRLQC(-14)SC(14)		0	1	0			REV__ENSG00000147234|ENST00000683843|FRMPD3	REV__ENSG00000147234|ENST00000683843|FRMPD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.7649536132812	2	568.762983	1135.51141	1.1287	0.00064197	3.0064	0.00171	4.1352	0.0023519	568.7646112481654	83.583	2.2126	83.642	82.984	85.196	0.059258					128	50	4	0	0	0	0.49268	1	8424	8424		56.434	6.9922	2	1696800	+		63538	20061	42248	42266	72080	72080	251;252				-0.05092236662630967
VPSSRLQCSC	10	Carbamidomethyl (C)	_VPSSRLQC(Carbamidomethyl (C))SC_	VPSSRLQC(0.5)SC(0.5)		VPSSRLQC(0)SC(0)		0	1	0			REV__ENSG00000147234|ENST00000683843|FRMPD3	REV__ENSG00000147234|ENST00000683843|FRMPD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.7651977539062	2	568.762983	1135.51141	0.85198	0.00048457	3.7137	0.0021122	4.5657	0.0025968	568.76493069356	83.965	1.7117	84.42	83.767	85.479	0.45556					113	41	4	0	0	0	0.47091	1	9791	9791		58.23	10.573	2	2150800	+		63539	20061	42248	42266	72081	72081	251;252				-0.05092236662630967
VPSSVCTL	8	Unmodified	_VPSSVCTL_					0	0	0			REV__ENST00000481849.5_1_6:31321800-31321935:-|nuORF	REV__ENST00000481849.5_1_6:31321800-31321935:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.20916748046875	2	403.209847	804.40514	-0.60775	-0.00024505	-1.7885	-0.00072113	-2.3962	-0.00096618	403.2090521764512	85.615	1.3902	86.062	85.664	87.054	0.44736					79	33	4	0	0	0	0.84341	1	10032	10032		24.203	3.7209	1	1223100	+		63540	27452	42249	42267	72082	72082					-0.004886241656436141
VPSTLVSLI	9	Unmodified	_VPSTLVSLI_					0	0	0		ENSG00000204246|ENST00000641090|OR13C3;nc|ENSG00000204246|Q8NGS6|OR13C3	ENSG00000204246|ENST00000641090|OR13C3	ENSG00000204246|ENST00000641090|OR13C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.79150390625	2	464.789318	927.564084	-1.14	-0.00052988	4.1432	0.0019257	3.0031	0.0013958	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.7932	1	1707	1707		17.365	0	1	286820			63541	8424	42250	42268	72083	72083					0.09740412734140591
VPSTPPEL	8	Unmodified	_VPSTPPEL_					0	0	0		nc|ENSG00000140534|Q7Z2Z1-2|TICRR;ENSG00000140534|ENST00000268138|TICRR	nc|ENSG00000140534|Q7Z2Z1-2|TICRR	nc|ENSG00000140534|Q7Z2Z1-2|TICRR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22637939453125	2	420.229094	838.443634	-1.3512	-0.00056782	-1.7107	-0.00071887	-3.0619	-0.0012867	420.2282629742312	76.938	2.2039	76.938	74.958	77.162	0					134	85	2	0	0	0	0.9159	1	6923	6923		44.531	7.5026	1	154140			63542	4443	42251	42269	72084	72084					0.017950047405179248
VPSVFRFARK	10	Unmodified	_VPSVFRFARK_					0	0	0			REV__ENST00000307533.10_1_4:6676410-6676837:+|nuORF	REV__ENST00000307533.10_1_4:6676410-6676837:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2104187011719	3	402.90838	1205.70331	0.65426	0.00026361	-2.6208	-0.0010559	-1.9665	-0.00079232	402.9072238846831	44.013	0.41	44.464	44.239	44.649	0.45025					15	9	2	0	0	0	0.37624	1	4019	4019		17.833	2.4957	1	95107	+		63543	24844	42252	42270	72085	72085					0.10868795142164345
VPSVFRFARK	10	Unmodified	_VPSVFRFARK_					0	0	0			REV__ENST00000307533.10_1_4:6676410-6676837:+|nuORF	REV__ENST00000307533.10_1_4:6676410-6676837:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	402.90838	1205.70331	-1.6267	-0.00065543	-0.60713	-0.00024462	-2.2339	-0.00090005	402.9081679683214	43.871	0.37001	44.644	44.463	44.833	0.7738	0.090385	0.0013559	NaN	17.833	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172320	+		63544	24844	42252	42270							0.10868795142164345
VPSVKVAVI	9	Unmodified	_VPSVKVAVI_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3013610839844	2	456.299853	910.585153	-0.68927	-0.00031451	3.5345	0.0016128	2.8453	0.0012983	456.30128778001557	35.219	1.6098	35.163	34.768	36.378	-0.056385					101	36	5	0	0	0	0.78536	1	2238	2238		29.15	3.6994	1	710350	+		63545	18987	42253	42271	72086	72086					0.1262842283365444
VPSVKVAVI	9	Unmodified	_VPSVKVAVI_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.3008117675781	2	456.299853	910.585153	-0.95599	-0.00043622	2.965	0.0013529	2.009	0.00091669	456.30107129124815	45.178	1.6921	45.147	44.106	45.798	-0.031067					86	38	3	0	0	0	0.76764	1	3626	3626		34.173	0	1	476180	+		63546	18987	42253	42271	72087	72087					0.1262842283365444
VPSVKVAVI	9	Unmodified	_VPSVKVAVI_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.79229736328125	2	456.299853	910.585153	-1.2996	-0.00059303	3.152	0.0014382	1.8523	0.00084521	456.3011423375775	39.586	2.0249	39.541	38.827	40.852	-0.044956					105	49	3	0	0	0	0.20789	1	2923	2923		35.618	0	1	362030	+		63547	18987	42253	42271	72088	72088					0.1262842283365444
VPSVKVAVI	9	Unmodified	_VPSVKVAVI_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.3010559082031	2	456.299853	910.585153	-1.2643	-0.00057689	4.2328	0.0019314	2.9685	0.0013545	456.30161744594176	35.005	1.68	35.044	34.605	36.285	0.038643					125	54	3	0	0	0	0.78536	1	1861	1861		29.15	3.6994	1	565550	+		63548	18987	42253	42271	72089	72089					0.1262842283365444
VPSVPISN	8	Unmodified	_VPSVPISN_					0	0	0			REV__ENSG00000107957|ENST00000369774|SH3PXD2A	REV__ENSG00000107957|ENST00000369774|SH3PXD2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.72967529296875	2	406.729261	811.443968	-0.18786	-7.6407E-05	-2.7564	-0.0011211	-2.9442	-0.0011975	406.7280690694445	76.123	2.0682	76.173	74.921	76.99	0.049194					93	66	2	0	0	0	0.87064	1	7365	7365		29.15	0	1	123610	+		63549	17685	42254	42272	72090	72090					0.030704244603725783
VPSYLVQPSKP	11	Unmodified	_VPSYLVQPSKP_					0	0	0			REV__ENSG00000164061|ENST00000296452|BSN	REV__ENSG00000164061|ENST00000296452|BSN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.564453125	3	405.564168	1213.67067	-0.18878	-7.6562E-05	1.7449	0.00070767	1.5561	0.00063111	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.67778	1	5924	5924		25.068	0	1	257140	+		63550	21019	42255	42273	72091	72091					0.0723854322866373
VPTPTSVLS	9	Unmodified	_VPTPTSVLS_					0	0	0		ENST00000330736.9_1_16:89334888-89371640:-|nuORF;ENSG00000167522|ENST00000301030|ANKRD11	ENST00000330736.9_1_16:89334888-89371640:-|nuORF	ENST00000330736.9_1_16:89334888-89371640:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7540283203125	2	450.755475	899.496398	0.36741	0.00016561	-2.8463	-0.001283	-2.4788	-0.0011174	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.78058	1	7790	7790		30.504	1.3541	1	394230			63551	6296	42256	42274	72092	72092					0.04262962803340997
VPTRGRPLLL	10	Unmodified	_VPTRGRPLLL_					0	0	0		ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000095539|Q9NTN9-3|SEMA4G	ENSG00000095539|ENST00000210633|SEMA4G	ENSG00000095539|ENST00000210633|SEMA4G	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	561.3627319335938	2	561.361308	1120.70806	0.36841	0.00020681	4.094	0.0022982	4.4624	0.002505	561.3635301771415	45.972	0.96019	46.015	45.484	46.444	0.042599					56	26	3	0	0	0	0.84816	1	3348	3348		17.468	1.8262	1	166630			63552	1729	42257	42275	72093	72093					0.15253679284933241
VPTVARNNPTS	11	Unmodified	_VPTVARNNPTS_					0	0	0			REV__ENSG00000116128|ENST00000234739|BCL9	REV__ENSG00000116128|ENST00000234739|BCL9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	578.310546875	2	578.309469	1154.60439	0.66204	0.00038287	1.3221	0.00076457	1.9841	0.0011474	578.3100530437905	110.07	1.6087	110.19	110.03	111.64	0.11946					88	58	4	0	0	0	0.72739	1	11894	11894		27.047	1.4733	1	2568100	+		63553	18181	42258	42276	72094	72094					0.033267273866158575
VPTVPLLPPQ	10	Unmodified	_VPTVPLLPPQ_					0	0	0		nc|ENSG00000115806|Q9H8Y8-2|GORASP2;ENSG00000115806|ENST00000234160|GORASP2;nc|ENSG00000115806|Q9H8Y8-3|GORASP2;ENST00000442798.5_1_2:171793138-171822637:+|nuORF	nc|ENSG00000115806|Q9H8Y8-2|GORASP2	nc|ENSG00000115806|Q9H8Y8-2|GORASP2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.8208618164062	2	530.823692	1059.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.569	1	84.718	84.218	85.218	0.14952								0	0	0	0.45132	1	8190	8190		30.504	0	1				63554	2872	42259	42277	72095	72095					0.10540077033851958
VPVAALVVG	9	Unmodified	_VPVAALVVG_					0	0	0		nc|ENSG00000067842|Q16720-8|ATP2B3;nc|ENSG00000067842|Q16720-7|ATP2B3;nc|ENSG00000067842|Q16720-6|ATP2B3;nc|ENSG00000067842|Q16720-3|ATP2B3;nc|ENSG00000067842|Q16720-5|ATP2B3;nc|ENSG00000067842|Q16720-2|ATP2B3;nc|ENSG00000067842|Q16720-4|ATP2B3;ENSG00000067842|ENST00000263519|ATP2B3	nc|ENSG00000067842|Q16720-8|ATP2B3	nc|ENSG00000067842|Q16720-8|ATP2B3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7672424316406	2	412.765646	823.516739	-1.0866	-0.00044849	4.3938	0.0018136	3.3073	0.0013651	412.7676061805143	37.834	2.8293	37.783	36.787	39.616	-0.050369					163	64	4	0	0	0	0.7932	1	2646	2646		21.702	3.3779	1	2097300			63555	1190	42260	42278	72096	72096					0.0979217825380374
VPVAIRVLDV	10	Unmodified	_VPVAIRVLDV_					0	0	0		nc|ENSG00000140937|P55287-2|CDH11;ENSG00000140937|ENST00000268603|CDH11	nc|ENSG00000140937|P55287-2|CDH11	nc|ENSG00000140937|P55287-2|CDH11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	540.8184204101562	2	540.842416	1079.67028	0.057616	3.1161E-05	-0.81296	-0.00043968	-0.75535	-0.00040852	540.8421687757253	74.95	0.56383	75.075	74.686	75.25	0.12545					18	14	2	0	0	0	0.86718	1	6954	6954		27.882	1.1893	1	88507			63556	4465	42261	42279	72097	72097					0.133631682994519
VPVALGISS	9	Unmodified	_VPVALGISS_					0	0	0		ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7517395019531	2	421.752736	841.490919	-1.7782	-0.00074997	0.91991	0.00038797	-0.85831	-0.000362	421.75218958440666	77.386	3.85	77.511	77.102	80.952	0.12485					260	132	4	0	0	0	0.76996	1	7256	7256		33.516	0	1	434130			63557	5530	42262	42280	72098	72098					0.06383284011531032
VPVEGDEVTY	10	Unmodified	_VPVEGDEVTY_					0	0	0		ENSG00000172346|ENST00000306149|CSDC2;ENSG00000153048|ENST00000311052|CARHSP1	ENSG00000172346|ENST00000306149|CSDC2	ENSG00000172346|ENST00000306149|CSDC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.2651977539062	2	554.263862	1106.51317	0.12713	7.0464E-05	-2.9017	-0.0016083	-2.7745	-0.0015378	554.2620078315325	55.424	1.2545	55.825	54.901	56.156	0.40101					76	29	3	0	0	0	0.43769	2	5701	5688;5701		60.972	5.3835	1	875290			63558	6764	42263	42281	72099;72100	72100					-0.035825811013637576
VPVGWESHL	9	Unmodified	_VPVGWESHL_					0	0	0		ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.7720947265625	2	512.266542	1022.51853	4.8773	0.0024985	3.5717	0.0018296	8.449	0.0043281	512.2679964843359	106.96	1.075	107.11	106.6	107.68	0.14929					66	41	3	0	0	0	0.77546	1	13067	13067		31.955	2.8053	1	226660			63559	8322	42264	42282	72101	72101					0.00817187271752573
VPVHLCYFVL	10	Unmodified	_VPVHLCYFVL_					0	0	0		ENST00000415766.7_1_16:67840694-67840913:+|nuORF	ENST00000415766.7_1_16:67840694-67840913:+|nuORF	ENST00000415766.7_1_16:67840694-67840913:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.7223510742188	2	595.325545	1188.63654	-0.14392	-8.5679E-05	-2.7451	-0.0016342	-2.889	-0.0017199	595.3238282074745	79.885	0.63213	80.434	80.17	80.802	0.54945					32	14	3	0	0	0	0.37624	1	9184	9184		26.796	0	1	400500			63560	11386	42265	42283	72102	72102					0.04976423536049879
VPVHVRLL	8	Unmodified	_VPVHVRLL_					0	0	0			REV__ENST00000334554.11_1_22:20119331-20127004:+|nuORF	REV__ENST00000334554.11_1_22:20119331-20127004:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	466.80584716796875	2	466.805637	931.596721	-0.25933	-0.00012106	1.8679	0.00087195	1.6086	0.00075089	466.80631326130225	31.324	1.1632	31.272	30.944	32.108	-0.051033					55	26	3	0	0	0	0.81724	1	1752	1752		14.664	0	1	77668	+		63561	25160	42266	42284	72103	72103					0.12818664647659261
VPVIVSLSI	9	Unmodified	_VPVIVSLSI_					0	0	0			REV__nc|ENSG00000143297|Q96RD9-3|FCRL5	REV__nc|ENSG00000143297|Q96RD9-3|FCRL5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.79962158203125	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3341	3341		12.207	0	1	1516700	+		63562	19787	42267	42285	72104	72104					0.11905003113804469
VPVIVSLSI	9	Unmodified	_VPVIVSLSI_					0	0	0			REV__nc|ENSG00000143297|Q96RD9-3|FCRL5	REV__nc|ENSG00000143297|Q96RD9-3|FCRL5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8011779785156	2	463.799686	925.584819	-0.24475	-0.00011352	3.0643	0.0014212	2.8195	0.0013077	463.8008545525102	46.185	0.71794	46.106	45.759	46.477	-0.079006					36	20	2	0	0	0	0.7932	1	3374	3374		13.775	0.81615	1	192340	+		63563	19787	42267	42285	72105	72105					0.11905003113804469
VPVLIHTPL	9	Unmodified	_VPVLIHTPL_					0	0	0			REV__ENST00000278412.6_1_11:57093684-57093861:-|nuORF	REV__ENST00000278412.6_1_11:57093684-57093861:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.81689453125	2	494.813128	987.611703	0.2049	0.00010139	2.7984	0.0013847	3.0033	0.0014861	494.81428223883705	31.363	0.51293	31.381	31.121	31.634	0.018362					15	11	2	0	0	0	0.7932	1	1677	1677		24.203	2.2429	1	29971	+		63564	24592	42268	42286	72106	72106					0.11740111724986946
VPVLLIIVSV	10	Unmodified	_VPVLLIIVSV_					0	0	0			REV__nc|ENSG00000182477|P59922|OR2B8P	REV__nc|ENSG00000182477|P59922|OR2B8P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3607788085938	2	526.359911	1050.70527	0.25296	0.00013315	2.2538	0.0011863	2.5068	0.0013195	526.3609378895691	36.94	1.9118	37.039	36.051	37.962	0.099277					159	60	4	0	0	0	0.8488	1	2151	2151		17.365	0.89182	1	1522000	+		63565	30078	42269	42287	72107	72107					0.18194411107424457
VPVLQGVR	8	Unmodified	_VPVLQGVR_					0	0	0		ENST00000345264.9_1_10:16859009-16859404:-|nuORF;ENST00000464074.6_1_10:16769067-16859404:-|nuORF	ENST00000345264.9_1_10:16859009-16859404:-|nuORF	ENST00000345264.9_1_10:16859009-16859404:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.252197265625	2	434.27417	866.533787	0.20242	8.7906E-05	1.7062	0.00074094	1.9086	0.00082884	434.2734948556609	77.466	0.87325	78.034	77.791	78.664	0.56836					48	20	4	0	0	0	0.4196	1	8876	8876		44.531	9.3304	1	321550			63566	10303	42270	42288	72108	72108					0.09518098859609836
VPVPEPNTH	9	Unmodified	_VPVPEPNTH_					0	0	0		ENSG00000176681|ENST00000320254|LRRC37A;ENSG00000176809|ENST00000584306|LRRC37A3;ENSG00000238083|ENST00000576629|LRRC37A2;ENST00000570311.1_1_17:45097119-45126782:+|nuORF	ENSG00000176681|ENST00000320254|LRRC37A	ENSG00000176681|ENST00000320254|LRRC37A	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	495.7254638671875	2	495.256174	988.497795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.468	1	72.598	72.098	73.098	0.13064								0	0	0	0.2969	1	6647	6647		31.955	0.37597	1				63567	7094	42271	42289	72109	72109					0.0030859689210274155
VPVPLPVI	8	Unmodified	_VPVPLPVI_					0	0	0			REV__nc|ENSG00000131831|Q9Y5P3-2|RAI2	REV__nc|ENSG00000131831|Q9Y5P3-2|RAI2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.28973388671875	2	417.278389	832.542226	0.036788	1.5351E-05	-2.5023	-0.0010441	-2.4655	-0.0010288	417.27754174464445	74.504	0.20106	75.063	74.921	75.122	0.55891					5	4	2	0	0	0	0.4196	1	8420	8420		16.705	0	1	62928	+		63568	18970	42272	42290	72110	72110					0.11925652776221796
VPVPPNVAF	9	Unmodified	_VPVPPNVAF_					0	0	0		ENST00000600274.5_1_19:42396347-42410935:+|nuORF;nc|ENSG00000076928|Q92888-2|ARHGEF1;ENSG00000076928|ENST00000354532|ARHGEF1;nc|ENSG00000076928|Q92888-3|ARHGEF1;nc|ENSG00000076928|Q92888-4|ARHGEF1	ENST00000600274.5_1_19:42396347-42410935:+|nuORF	ENST00000600274.5_1_19:42396347-42410935:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.26837158203125	2	470.268553	938.522553	-0.5952	-0.00027991	0.70461	0.00033135	0.1094	5.1449E-05	470.26875072135346	74.151	2.0983	74.542	73.933	76.031	0.3911					119	51	3	0	0	0	0.25826	8	8350	8313;8325;8337;8350;8375;8387;8399;8411		68.485	23.265	1	1416400			63569	1369	42273	42291	72111;72112;72113;72114;72115;72116;72117;72118	72114					0.05083276765469691
VPVPPNVAF	9	Unmodified	_VPVPPNVAF_					0	0	0		ENST00000600274.5_1_19:42396347-42410935:+|nuORF;nc|ENSG00000076928|Q92888-2|ARHGEF1;ENSG00000076928|ENST00000354532|ARHGEF1;nc|ENSG00000076928|Q92888-3|ARHGEF1;nc|ENSG00000076928|Q92888-4|ARHGEF1	ENST00000600274.5_1_19:42396347-42410935:+|nuORF	ENST00000600274.5_1_19:42396347-42410935:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.26824951171875	2	470.268553	938.522553	-0.59682	-0.00028066	0.69957	0.00032898	0.10275	4.8321E-05	470.2687452652717	73.919	2.2099	74.478	73.965	76.174	0.55891					143	55	4	0	0	0	0.25826	7	8349	8301;8313;8325;8337;8349;8361;8385		68.485	21.77	1	1996400			63570	1369	42273	42291	72119;72120;72121;72122;72123;72124;72125	72123					0.05083276765469691
VPVRAVHR	8	Unmodified	_VPVRAVHR_					0	0	0		ENST00000366463.6_1_22:36886057-36894231:-|nuORF	ENST00000366463.6_1_22:36886057-36894231:-|nuORF	ENST00000366463.6_1_22:36886057-36894231:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2909851074219	2	467.290685	932.566818	0.090159	4.213E-05	-0.43366	-0.00020264	-0.3435	-0.00016051	467.29038676820915	33.276	0.922	33.445	33.103	34.025	0.16971					54	21	4	0	0	0	0.9159	1	2363	2363		44.531	2.0566	1	2902500			63571	10506	42274	42292	72126	72126					0.09783725702322954
VPVRAVHR	8	Unmodified	_VPVRAVHR_					0	0	0		ENST00000366463.6_1_22:36886057-36894231:-|nuORF	ENST00000366463.6_1_22:36886057-36894231:-|nuORF	ENST00000366463.6_1_22:36886057-36894231:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.29046630859375	2	467.290685	932.566818	0.59956	0.00028017	-0.99923	-0.00046693	-0.39967	-0.00018676	467.29008476451924	33.209	0.96325	33.421	33.102	34.066	0.21168					61	22	4	0	0	0	0.73619	1	2389	2389		65.897	2.919	1	3366300			63572	10506	42274	42292	72127	72127					0.09783725702322954
VPVVAGTTV	9	Unmodified	_VPVVAGTTV_					0	0	0			REV__ENST00000520272.6_1_8:38089657-38090580:+|nuORF	REV__ENST00000520272.6_1_8:38089657-38090580:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.7509460449219	2	421.752736	841.490919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.453	1	77.544	77.044	78.044	0.091438								0	0	0	0.31472	1	7241	7241		25.45	1.2474	1		+		63573	26159	42275	42293	72128	72128					0.06383284011519663
VPVWIIHYY	9	Unmodified	_VPVWIIHYY_					0	0	0		nc|ENSG00000165264|O95139-2|NDUFB6;ENSG00000165264|ENST00000379847|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.7225952148438	2	595.32386	1188.63317	-0.10025	-5.9679E-05	0.01815	1.0805E-05	-0.082097	-4.8874E-05	595.3236480553634	79.969	0.67577	80.386	80.125	80.801	0.41621					37	15	3	0	0	0	0.20789	1	9179	9179		39.021	13.447	1	389050			63574	6064	42276	42294	72129	72129					0.04639496753725325
VPWKQRIDS	9	Unmodified	_VPWKQRIDS_					0	0	0			REV__ENST00000508922.5_3_5:52394525-52403022:-|nuORF	REV__ENST00000508922.5_3_5:52394525-52403022:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.8106079101562	2	564.811648	1127.60874	-1.1972	-0.0006762	0.90264	0.00050982	-0.29457	-0.00016638	564.8121636275911	46.856	0.54027	46.856	46.535	47.075	0					20	12	2	0	0	0	0.64922	1	3577	3577		44.117	4.864	1	164290	+		63575	21046	42277	42295	72130	72130					0.050042366001889604
VPWKQRIDS	9	Unmodified	_VPWKQRIDS_					0	0	0			REV__ENST00000508922.5_3_5:52394525-52403022:-|nuORF	REV__ENST00000508922.5_3_5:52394525-52403022:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	564.811279296875	2	564.811648	1127.60874	0.3609	0.00020384	-0.38188	-0.00021569	-0.020982	-1.1851E-05	564.8113401036301	46.866	0.63782	46.885	46.565	47.203	0.018967					24	16	2	0	0	0	0.72402	1	3469	3469		38.806	3.1879	1	251190	+		63576	21046	42277	42295	72131	72131					0.050042366001889604
VPWLSSVRY	9	Unmodified	_VPWLSSVRY_					0	0	0		ENSG00000107968|ENST00000263056|MAP3K8;nc|ENSG00000107968|P41279-2|MAP3K8	ENSG00000107968|ENST00000263056|MAP3K8	ENSG00000107968|ENST00000263056|MAP3K8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8026123046875	2	553.803291	1105.59203	0.4171	0.00023099	-0.43156	-0.000239	-0.014457	-8.0061E-06	553.8029689460955	67.918	0.87567	68.303	67.946	68.821	0.38483					46	20	3	0	0	0	0.6204	3	7452	7443;7452;7482		45.972	6.869	1	445130			63577	2385	42278	42296	72132;72133;72134	72133					0.043457357142415276
VPWLSSVRY	9	Unmodified	_VPWLSSVRY_					0	0	0		ENSG00000107968|ENST00000263056|MAP3K8;nc|ENSG00000107968|P41279-2|MAP3K8	ENSG00000107968|ENST00000263056|MAP3K8	ENSG00000107968|ENST00000263056|MAP3K8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8059692382812	2	553.803291	1105.59203	-0.24786	-0.00013726	0.35052	0.00019412	0.10267	5.6858E-05	553.8034737708317	67.84	1.0129	68.388	67.938	68.951	0.54819					37	23	2	0	0	0	0.48102	1	7452	7452		52.937	5.0211	1	497640			63578	2385	42278	42296	72135	72135					0.043457357142415276
VPWTGYQGRF	10	Unmodified	_VPWTGYQGRF_					0	0	0		ENSG00000198265|ENST00000358691|HELZ	ENSG00000198265|ENST00000358691|HELZ	ENSG00000198265|ENST00000358691|HELZ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	606.30615234375	2	605.803823	1209.59309	0.5126	0.00031053	0.20011	0.00012123	0.71271	0.00043176	605.8036610360224	56.198	0.83415	56.758	56.395	57.23	0.55954					56	20	4	0	0	0	0.60985	1	5788	5788		49.536	7.1399	1	3028000			63579	8260	42279	42297	72136	72136					-0.0033204991686943686
VPYPDDLVGF	10	Unmodified	_VPYPDDLVGF_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;ENST00000494058.5_1_6:31934804-31935971:+|nuORF;ENST00000461915.5_1_6:31934795-31936203:+|nuORF;ENST00000484835.1_1_6:31934891-31936687:+|nuORF	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.27978515625	2	561.279315	1120.54408	0.97335	0.00054632	-0.78105	-0.00043839	0.1923	0.00010793	561.2787758883688	87.737	0.9844	88.185	87.767	88.752	0.44761					61	23	4	0	0	0	0.71042	1	10289	10289		44.117	3.5442	1	1224500			63580	8435	42280	42298	72137	72137					-0.011373829964895776
VPYPDDLVGF	10	Unmodified	_VPYPDDLVGF_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;ENST00000494058.5_1_6:31934804-31935971:+|nuORF;ENST00000461915.5_1_6:31934795-31936203:+|nuORF;ENST00000484835.1_1_6:31934891-31936687:+|nuORF	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.2791748046875	2	561.279315	1120.54408	-0.75812	-0.00042551	0.97773	0.00054878	0.21962	0.00012327	561.2797253849023	87.827	1.0171	88.29	87.811	88.829	0.46312					65	24	4	0	0	0	0.53935	1	10334	10334		53.351	12.779	1	1423400			63581	8435	42280	42298	72138	72138					-0.011373829964895776
VPYRIFPY	8	Unmodified	_VPYRIFPY_					0	0	0		ENSG00000143815|ENST00000272163|LBR;ENST00000441022.1_1_1:225591007-225592250:-|nuORF	ENSG00000143815|ENST00000272163|LBR	ENSG00000143815|ENST00000272163|LBR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.7886352539062	2	527.789653	1053.56475	0.15169	8.0062E-05	-0.090501	-4.7766E-05	0.061191	3.2296E-05	527.7895850724291	66.863	0.75493	67.413	66.896	67.651	0.55071					46	24	2	0	0	0	0.91005	1	7321	7321		42.474	1.9018	1	418220			63582	4665	42281	42299	72139	72139					0.04011252173859248
VPYRVPNN	8	Unmodified	_VPYRVPNN_					0	0	0		ENSG00000106624|ENST00000223357|AEBP1;nc|ENSG00000106624|Q8IUX7-2|AEBP1	ENSG00000106624|ENST00000223357|AEBP1	ENSG00000106624|ENST00000223357|AEBP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774658203125	2	479.758884	957.503215	-0.82822	-0.00039735	-2.5552	-0.0012259	-3.3834	-0.0016232	479.7579309397157	84.21	0.55819	84.386	84.188	84.747	0.17561					16	12	2	0	0	0	0.4196	1	8224	8224		25.45	3.4903	1	79328			63583	2307	42282	42300	72140	72140					0.02276320474561544
VPYRVPNN	8	Unmodified	_VPYRVPNN_					0	0	0		ENSG00000106624|ENST00000223357|AEBP1;nc|ENSG00000106624|Q8IUX7-2|AEBP1	ENSG00000106624|ENST00000223357|AEBP1	ENSG00000106624|ENST00000223357|AEBP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2793273925781	2	479.758884	957.503215	-0.82497	-0.00039579	-2.9227	-0.0014022	-3.7477	-0.001798	479.7574246719915	85.945	2.9848	86.13	84.756	87.741	0.18522					104	69	2	0	0	0	0.4196	1	8363	8363		18.324	0	1	165490			63584	2307	42282	42300	72141	72141					0.02276320474561544
VPYVRHKILN	10	Unmodified	_VPYVRHKILN_					0	0	0		ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8700561523438	2	619.87204	1237.72953	-0.2143	-0.00013284	-4.1033	-0.0025435	-4.3176	-0.0026764	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.84112	1	9250	9250		37.159	5.6293	1	1169100			63585	1102	42283	42301	72142	72142					0.12017064313681658
VQAPHLSK	8	Unmodified	_VQAPHLSK_					0	0	0		nc|ENSG00000146376|Q8N392-2|ARHGAP18;ENSG00000146376|ENST00000368149|ARHGAP18	nc|ENSG00000146376|Q8N392-2|ARHGAP18	nc|ENSG00000146376|Q8N392-2|ARHGAP18	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	440.2554016113281	2	440.255977	878.497401	0.25826	0.0001137	-1.4885	-0.00065531	-1.2302	-0.00054161	440.2551628141125	62.575	1.3839	63.129	62.257	63.641	0.5545					72	31	3	0	0	0	0.86677	1	6747	6747		27.882	2.4321	1	690880			63586	4838	42284	42302	72143	72143					0.05329221962892916
VQAPRKGN	8	Unmodified	_VQAPRKGN_					0	0	0		ENSG00000173546|ENST00000308508|CSPG4;ENST00000560634.1_1_15:84858634-84860056:+|nuORF;ENST00000558229.1_15:82983798-82985220:-|nuORF	ENSG00000173546|ENST00000308508|CSPG4	ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2520751953125	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.87922	3	8980	8957;8970;8980		38.806	5.6333	1	2020200			63587	6866	42285	42303	72144;72145;72146	72146					0.04839453677379879
VQASEANLQ	9	Unmodified	_VQASEANLQ_					0	0	0		nc|ENSG00000055957|P19827-3|ITIH1;nc|ENSG00000055957|P19827-2|ITIH1;ENSG00000055957|ENST00000273283|ITIH1	nc|ENSG00000055957|P19827-3|ITIH1	nc|ENSG00000055957|P19827-3|ITIH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.242919921875	2	480.243264	958.471974	-1.5873	-0.00076229	1.5949	0.00076594	0.0076101	3.6547E-06	480.243773059925	32.707	1.1523	32.706	32.292	33.444	-0.0016365					48	27	3	0	0	0	0.51592	1	1871	1871		51.193	3.2771	1	175860			63588	1033	42286	42304	72147	72147					-0.008922973501853448
VQAVRPND	8	Unmodified	_VQAVRPND_					0	0	0			REV__ENST00000507603.1_1_4:75230965-75246855:+|nuORF	REV__ENST00000507603.1_1_4:75230965-75246855:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.2633056640625	2	449.740691	897.466829	0.51649	0.00023229	-0.86373	-0.00038845	-0.34723	-0.00015617	449.7407032718928	29.599	0.60109	29.509	29.191	29.792	-0.089544					22	13	3	0	0	0	0.4196	1	1918	1918		30.504	0	1	58873	+		63589	18621	42287	42305	72148	72148					0.013994435778499792
VQEIATSEI	9	Unmodified	_VQEIATSEI_					0	0	0		ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2600402832031	2	495.261122	988.507691	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.103	1	35.351	34.851	35.851	0.24769								0	0	0	0.34972	1	2654	2654		47.657	0	1				63590	2738	42288	42306	72149	72149					0.012977401068042127
VQEIMSIFGD	10	Unmodified	_VQEIMSIFGD_					0	0	0		ENSG00000171234|ENST00000305231|UGT2B7	ENSG00000171234|ENST00000305231|UGT2B7	ENSG00000171234|ENST00000305231|UGT2B7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	569.7774658203125	2	569.776082	1137.53761	1.1818	0.00067335	2.2692	0.0012929	3.451	0.0019663	569.7772768590696	24.189	0.77201	24.146	23.852	24.624	-0.043221					44	17	3	0	0	0	0.54701	1	877	877		52.937	6.9847	1	163200			63591	6650	42289	42307	72150	72150					-0.025656442194986084
VQENMIVFLSP	11	Unmodified	_VQENMIVFLSP_					0	0	0			REV__ENSG00000164483|ENST00000439090|SAMD3	REV__ENSG00000164483|ENST00000439090|SAMD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	638.8353271484375	2	638.833931	1275.65331	-0.69863	-0.00044631	3.3587	0.0021457	2.6601	0.0016994	638.835717832915	74.828	1.0238	74.914	74.628	75.651	0.085907					67	27	4	0	0	0	0.51007	1	6931	6931		51.193	3.2332	1	647960	+		63592	21085	42290	42308	72151	72151					0.026508796313692073
VQERRRKKRKS	11	Unmodified	_VQERRRKKRKS_					0	0	0		nc|ENSG00000128604|Q13568-6|IRF5	nc|ENSG00000128604|Q13568-6|IRF5	nc|ENSG00000128604|Q13568-6|IRF5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7944030761719	3	490.974447	1469.90151	-0.95927	-0.00047098	-1.5761	-0.00077381	-2.5353	-0.0012448	491.30802176601804	44.341	0.24163	44.791	44.691	44.932	0.45025					11	5	3	0	0	0	0.17911	1	4051	4051		9.2118	0.80454	1	251650			63593	14898	42291	42309	72152	72152					0.18535609053878943
VQFAAGAQRR	10	Unmodified	_VQFAAGAQRR_					0	0	0			REV__ENSG00000113555|ENST00000231484|PCDH12	REV__ENSG00000113555|ENST00000231484|PCDH12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3064575195312	2	552.307064	1102.59957	0.78014	0.00043088	-1.9577	-0.0010812	-1.1775	-0.00065035	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.80179	1	9297	9297		39.253	1.4413	1	1841700	+		63594	17998	42292	42310	72153	72153					0.052378880345031575
VQFIRKEL	8	Unmodified	_VQFIRKEL_					0	0	0			REV__ENST00000523834.1_1_8:38645888-38646230:+|nuORF	REV__ENST00000523834.1_1_8:38645888-38646230:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.2860107421875	2	516.813659	1031.61277	0.23676	0.00012236	0.76189	0.00039375	0.99865	0.00051611	516.8140522792671	36.247	1.2668	36.35	35.617	36.883	0.10306					59	41	2	0	0	0	0.4196	1	2043	2043		12.207	0	1	91119	+		63595	28147	42293	42311	72154	72154					0.09822326093899392
VQFIRKEL	8	Unmodified	_VQFIRKEL_					0	0	0			REV__ENST00000523834.1_1_8:38645888-38646230:+|nuORF	REV__ENST00000523834.1_1_8:38645888-38646230:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	516.813659	1031.61277	-1.6019	-0.0008279	2.7318	0.0014118	1.1299	0.00058395	516.8149522699644	36.404	1.2683	36.404	35.643	36.911	0	0.020984	0.0010447	NaN	12.207	58	30	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66622	+		63596	28147	42293	42311							0.09822326093899392
VQFIRKEL	8	Unmodified	_VQFIRKEL_					0	0	0			REV__ENST00000523834.1_1_8:38645888-38646230:+|nuORF	REV__ENST00000523834.1_1_8:38645888-38646230:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	516.813659	1031.61277	0.27813	0.00014374	1.1706	0.00060498	1.4487	0.00074872	516.8142664901479	36.348	1.3615	36.287	35.455	36.816	-0.060337	-0.095828	-0.00056903	NaN	12.207	53	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92218	+		63597	28147	42293	42311							0.09822326093899392
VQFVPFRNFKH	11	Unmodified	_VQFVPFRNFKH_					0	0	0		nc|ENSG00000196353|Q96A23-2|CPNE4;ENSG00000196353|ENST00000429747|CPNE4;ENST00000514439.1_1_3:131254041-131261643:-|nuORF	nc|ENSG00000196353|Q96A23-2|CPNE4	nc|ENSG00000196353|Q96A23-2|CPNE4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.5955810546875	3	473.594573	1417.76189	0.87703	0.00041536	1.5194	0.00071959	2.3965	0.0011349	473.59513909282344	21.13	0.43257	21.198	21.043	21.475	0.068251					24	15	2	0	0	0	0.74405	1	540	540		23.378	4.8469	1	30476			63598	8042	42294	42312	72155	72155					0.06971851716616584
VQGAVTAPWVL	11	Unmodified	_VQGAVTAPWVL_					0	0	0		ENST00000292524.5_1_8:145748479-145748992:+|nuORF	ENST00000292524.5_1_8:145748479-145748992:+|nuORF	ENST00000292524.5_1_8:145748479-145748992:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.82275390625	2	570.824224	1139.63389	0.16054	9.164E-05	0.12067	6.8882E-05	0.28121	0.00016052	570.8240970044897	61.664	0.90487	61.631	61.356	62.261	-0.033173					76	36	3	0	0	0	0.55601	1	5843	5843		47.96	9.1534	1	637440			63599	9688	42295	42313	72156	72156					0.06966291402773095
VQGKRPMP	8	Unmodified	_VQGKRPMP_					0	0	0		nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4	nc|ENSG00000127616|P51532-5|SMARCA4	nc|ENSG00000127616|P51532-5|SMARCA4	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7561950683594	2	456.75783	911.501106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.058	1	64.088	63.588	64.588	0.030243								0	0	0	0.29452	1	5628	5628		33.516	3.674	1				63600	3511	42296	42314	72157	72157					0.04181568465105556
VQGKRVVN	8	Unmodified	_VQGKRVVN_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2744140625	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.7961	1	10033	10033		17.365	0	1	47650000	+		63601	20437;29946	42297	42315	72158	72158					0.08152313228515595
VQGLGLNL	8	Unmodified	_VQGLGLNL_					0	0	0			REV__ENST00000524856.1_1_11:65375623-65381302:-|nuORF	REV__ENST00000524856.1_1_11:65375623-65381302:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.2674560546875	2	407.245078	812.475603	-0.085129	-3.4668E-05	-0.059947	-2.4413E-05	-0.14508	-5.9081E-05	407.2451851725219	33.978	0.17879	33.974	33.818	33.997	-0.0047417					5	3	2	0	0	0	0.4196	1	2004	2004		12.207	0	1	9570.2	+		63602	28176	42298	42316	72159	72159					0.06186417214314588
VQGLIRHF	8	Unmodified	_VQGLIRHF_					0	0	0		nc|ENSG00000167792|P49821-2|NDUFV1;ENSG00000167792|ENST00000322776|NDUFV1;ENST00000531250.1_1_11:67379349-67379926:+|nuORF;ENST00000526770.5_1_11:67378371-67379926:+|nuORF	nc|ENSG00000167792|P49821-2|NDUFV1	nc|ENSG00000167792|P49821-2|NDUFV1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.2869873046875	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.608	1	41.612	41.112	42.112	0.0043983								0	0	0	0.30045	1	2733	2733		40.573	5.3719	1				63603	6332	42299	42317	72160	72160					0.07004903608185487
VQGLLVVP	8	Unmodified	_VQGLLVVP_					0	0	0			REV__ENST00000585105.5_1_17:73489877-73495164:+|nuORF	REV__ENST00000585105.5_1_17:73489877-73495164:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.267578125	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.86791	1	2445	2445		28.254	4.0515	1	2034000	+		63604	22229	42300	42318	72161	72161					0.09792178253815109
VQGNCIVH	8	Unmodified	_VQGNCIVH_					0	0	0			REV__ENST00000459908.5_1_13:113439469-113512287:+|nuORF	REV__ENST00000459908.5_1_13:113439469-113512287:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2203674316406	2	435.218537	868.422522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.555	1	66.941	66.441	67.441	0.38581								0	0	0	0.29452	1	7264	7264		33.516	5.2613	1		+		63605	16561	42301	42319	72162	72162					-0.016952838399902248
VQGNYREC	8	Unmodified	_VQGNYREC_					0	0	0			REV__ENST00000498666.5_1_21:46306285-46312915:-|nuORF	REV__ENST00000498666.5_1_21:46306285-46312915:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.71826171875	2	484.716359	967.418164	1.5654	0.00075878	2.0226	0.00098037	3.588	0.0017392	484.7173495801951	99.412	0.71777	99.775	99.447	100.17	0.36292					52	17	4	0	0	0	0.92457	1	12043	12043		47.916	7.343	1	4379500	+		63606	20708	42302	42320	72163	72163					-0.06684793053545945
VQGPLGKI	8	Unmodified	_VQGPLGKI_					0	0	0		nc|ENSG00000116698|Q92540-2|SMG7;nc|ENSG00000116698|Q92540|SMG7;nc|ENSG00000116698|Q92540-5|SMG7;nc|ENSG00000116698|Q92540-4|SMG7;ENSG00000116698|ENST00000688051|SMG7	nc|ENSG00000116698|Q92540-2|SMG7	nc|ENSG00000116698|Q92540-2|SMG7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2578125	2	406.255446	810.496338	0.32239	0.00013097	4.1267	0.0016765	4.4491	0.0018075	406.25699058298386	55.031	2.344	55.122	53.969	56.313	0.091167					99	72	2	0	0	0	0.884	1	4571	4571		33.516	3.674	1	315510			63607	2936	42303	42321	72164	72164					0.08351007594001203
VQGPPGRAPT	10	Unmodified	_VQGPPGRAPT_					0	0	0		ENST00000489611.5_1_6:70926602-70990065:-|nuORF;nc|ENSG00000112280|P20849-2|COL9A1;ENSG00000112280|ENST00000357250|COL9A1;ENST00000486080.5_1_6:70926602-70955360:-|nuORF	ENST00000489611.5_1_6:70926602-70990065:-|nuORF	ENST00000489611.5_1_6:70926602-70990065:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	490.26708984375	2	490.269616	978.524678	-0.67207	-0.0003295	-1.9797	-0.00097057	-2.6517	-0.0013001	490.26866249477763	83.997	2.9917	84.163	83.319	86.311	0.1651					132	69	2	0	0	0	0.77314	1	8294	8294		40.778	5.1599	1	268130			63608	2648	42304	42322	72165	72165					0.03455705503279205
VQGPRIKH	8	Unmodified	_VQGPRIKH_					0	0	0		ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	467.7822570800781	2	467.782693	933.550834	-0.25741	-0.00012041	0.27471	0.00012851	0.017303	8.0942E-06	467.78264184327145	30.346	0.69899	30.279	29.984	30.683	-0.066113					39	15	4	0	0	0	0.90465	1	2006	2006		40.573	1.7665	1	679190			63609	8983	42305	42323	72166	72166					0.08140019465406567
VQGQLLNLKQ	10	Unmodified	_VQGQLLNLKQ_					0	0	0			REV__ENSG00000161010|ENST00000292586|MRNIP	REV__ENSG00000161010|ENST00000292586|MRNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8388061523438	2	570.840405	1139.66626	0.24304	0.00013874	-3.0157	-0.0017215	-2.7727	-0.0015827	570.8387431841412	50.551	0.65606	50.999	50.682	51.338	0.44761					39	15	4	0	0	0	0.86471	1	4975	4975		30.318	1.1477	1	2779100	+		63610	20757	42306	42324	72167	72167					0.10201078805744146
VQGRLLHF	8	Unmodified	_VQGRLLHF_					0	0	0		ENSG00000102794|ENST00000377462|ACOD1	ENSG00000102794|ENST00000377462|ACOD1	ENSG00000102794|ENST00000377462|ACOD1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	485.2843017578125	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.459	1	74.504	74.004	75.004	0.04509								0	0	0	0.29631	1	7207	7207		25.45	1.2474	1				63611	2018	42307	42325	72168	72168					0.07004903608174118
VQGRRITT	8	Unmodified	_VQGRRITT_					0	0	0		ENST00000477917.5_1_2:220147847-220147958:+|nuORF;ENST00000472019.5_1_2:220147533-220150716:+|nuORF;ENST00000473750.5_1_2:220147533-220149706:+|nuORF;nc|ENSG00000135924|P25686-2|DNAJB2;ENSG00000135924|ENST00000336576|DNAJB2	ENST00000477917.5_1_2:220147847-220147958:+|nuORF	ENST00000477917.5_1_2:220147847-220147958:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7777099609375	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.351	1	80.351	79.851	80.851	0								0	0	0	0.29871	1	7413	7413		23.042	3.6825	1				63612	4069	42308	42326	72169	72169					0.07307411740168845
VQGRRITT	8	Unmodified	_VQGRRITT_					0	0	0		ENST00000477917.5_1_2:220147847-220147958:+|nuORF;ENST00000472019.5_1_2:220147533-220150716:+|nuORF;ENST00000473750.5_1_2:220147533-220149706:+|nuORF;nc|ENSG00000135924|P25686-2|DNAJB2;ENSG00000135924|ENST00000336576|DNAJB2	ENST00000477917.5_1_2:220147847-220147958:+|nuORF	ENST00000477917.5_1_2:220147847-220147958:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7776184082031	2	465.777608	929.540663	-0.69238	-0.0003225	0.76957	0.00035845	0.077191	3.5954E-05	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.87922	1	9485	9485		31.955	0	1	927810			63613	4069	42308	42326	72170	72170					0.07307411740168845
VQGWQVKS	8	Unmodified	_VQGWQVKS_					0	0	0		ENST00000564774.5_1_16:84213598-84214368:-|nuORF	ENST00000564774.5_1_16:84213598-84214368:-|nuORF	ENST00000564774.5_1_16:84213598-84214368:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	466.25299072265625	2	466.253434	930.492316	-0.7568	-0.00035286	1.6057	0.00074864	0.84886	0.00039578	466.25405843319766	61.038	1.081	61.046	60.083	61.164	0.0081177					68	38	2	0	0	0	0.86677	1	5257	5257		27.882	0	1	201940			63614	13892	42309	42327	72171	72171					0.024289181002814075
VQHVVIGP	8	Unmodified	_VQHVVIGP_					0	0	0		ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-2|MET	ENSG00000105976|ENST00000397752|MET	ENSG00000105976|ENST00000397752|MET	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.7527160644531	2	424.75307	847.491587	0.68659	0.00029163	-1.8987	-0.00080646	-1.2121	-0.00051483	424.75214856371434	66.819	1.0126	67.204	66.547	67.559	0.38515					56	29	3	0	0	0	0.85277	1	7281	7281		25.45	1.2474	1	372660			63615	2269	42310	42328	72172	72172					0.061741234512510346
VQIKFIRCV	9	Unmodified	_VQIKFIRCV_					0	0	0			REV__nc|ENSG00000263417|Q86UQ5|GTSCR1	REV__nc|ENSG00000263417|Q86UQ5|GTSCR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.3329467773438	2	553.331162	1104.64777	0.80707	0.00044658	1.517	0.00083941	2.3241	0.001286	553.3318451739801	96.663	1.8533	97.067	96.582	98.436	0.40451					128	44	4	0	0	0	0.78058	1	11698	11698		30.504	0	1	3116400	+		63616	30253	42311	42329	72173	72173					0.09963245630183337
VQITLWKTD	9	Unmodified	_VQITLWKTD_					0	0	0		ENST00000398970.5_1_17:1326381-1326564:-|nuORF	ENST00000398970.5_1_17:1326381-1326564:-|nuORF	ENST00000398970.5_1_17:1326381-1326564:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.3062133789062	2	552.308406	1102.60226	0.78014	0.00043088	-4.3887	-0.0024239	-3.6085	-0.001993	552.3059182074907	92.46	3.6349	92.619	91.432	95.067	0.15874					279	86	5	0	0	0	0.68711	1	9394	9394		41.427	0.64845	1	1841700			63617	11197	42312	42330	72174	72174					0.05506298648788288
VQKAPRLIP	9	Unmodified	_VQKAPRLIP_					0	0	0		nc|ENSG00000197603|Q9H799-5|CPLANE1;nc|ENSG00000197603|Q9H799|CPLANE1;ENSG00000197603|ENST00000651892|CPLANE1	nc|ENSG00000197603|Q9H799-5|CPLANE1	nc|ENSG00000197603|Q9H799-5|CPLANE1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.8145446777344	2	511.329476	1020.6444	0.42575	0.0002177	-1.9289	-0.0009863	-1.5031	-0.0007686	511.3284076214443	78.25	1.4692	78.813	78.416	79.885	0.56332					67	34	3	0	0	0	0.20789	1	9049	9049		24.203	4.8428	1	338170			63618	8182	42313	42331	72175	72175					0.13490318847846083
VQKERMRFI	9	Unmodified	_VQKERMRFI_					0	0	0			REV__ENSG00000106263|ENST00000360876|EIF3B	REV__ENSG00000106263|ENST00000360876|EIF3B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	603.842529296875	2	603.842425	1205.6703	2.904	0.0017536	-2.5352	-0.0015309	0.36882	0.00022271	603.8408639395307	102.57	0.46542	102.86	102.51	102.98	0.29865					25	10	3	0	0	0	0.72402	1	12493	12493		38.806	10.924	1	585380	+		63619	17603	42314	42332	72176	72176					0.07568845027799398
VQKGHVKGG	9	Unmodified	_VQKGHVKGG_					0	0	0			REV__ENSG00000137501|ENST00000359152|SYTL2	REV__ENSG00000137501|ENST00000359152|SYTL2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	455.24755859375	2	455.266876	908.519199	0.04034	1.8366E-05	-1.7174	-0.00078187	-1.677	-0.0007635	455.2660414918956	52.665	0.64455	52.683	52.533	53.177	0.017487					23	16	2	0	0	0	0.20789	1	4635	4635		23.042	5.6775	1	47291	+		63620	19388	42315	42333	72177	72177					0.06128026711473922
VQKGHVKGG	9	Unmodified	_VQKGHVKGG_					0	0	0			REV__ENSG00000137501|ENST00000359152|SYTL2	REV__ENSG00000137501|ENST00000359152|SYTL2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	455.266876	908.519199	-0.054249	-2.4698E-05	-2.2575	-0.0010278	-2.3118	-0.0010525	455.2655548688926	52.645	0.56332	52.642	52.336	52.899	-0.0033035	0.13649	-0.00096378	NaN	16.473	19	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53455	+		63621	19388	42315	42333							0.06128026711473922
VQKGHVKGG	9	Unmodified	_VQKGHVKGG_					0	0	0			REV__ENSG00000137501|ENST00000359152|SYTL2	REV__ENSG00000137501|ENST00000359152|SYTL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	455.266876	908.519199	-1.2495	-0.00056888	-0.18809	-8.5632E-05	-1.4376	-0.00065451	455.26667892172753	52.316	1.9554	52.357	50.857	52.813	0.040592	-0.14849	0.0009205	NaN	16.473	74	60	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	175850	+		63622	19388	42315	42333							0.06128026711473922
VQKGHVKGG	9	Unmodified	_VQKGHVKGG_					0	0	0			REV__ENSG00000137501|ENST00000359152|SYTL2	REV__ENSG00000137501|ENST00000359152|SYTL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	455.266876	908.519199	0.32174	0.00014648	-1.8803	-0.00085604	-1.5586	-0.00070956	455.26591234723185	52.387	1.355	52.446	51.457	52.812	0.059719	-0.058684	-0.00062031	NaN	16.473	73	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	151460	+		63623	19388	42315	42333							0.06128026711473922
VQKGHVKGG	9	Unmodified	_VQKGHVKGG_					0	0	0			REV__ENSG00000137501|ENST00000359152|SYTL2	REV__ENSG00000137501|ENST00000359152|SYTL2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	455.266876	908.519199	-0.49558	-0.00022562	-0.98999	-0.00045071	-1.4856	-0.00067633	455.2663335954671	52.473	1.0795	52.398	51.761	52.84	-0.074512	-0.1071	0.00019035	NaN	16.473	54	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	157900	+		63624	19388	42315	42333							0.06128026711473922
VQKGSELSDF	10	Unmodified	_VQKGSELSDF_					0	0	0			REV__nc|ENSG00000164649|Q96GN5-5|CDCA7L	REV__nc|ENSG00000164649|Q96GN5-5|CDCA7L	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	555.5045166015625	2	555.277303	1108.54005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.513	1	71.643	71.143	72.143	0.1301								0	0	0	0.45132	1	6522	6522		39.253	5.0803	1		+		63625	29992	42316	42334	72178	72178					-0.009874724901919762
VQKKTQILN	9	Unmodified	_VQKKTQILN_					0	0	0		nc|ENSG00000088387|Q9BZ29-3|DOCK9;nc|ENSG00000088387|Q9BZ29-5|DOCK9;nc|ENSG00000088387|Q9BZ29|DOCK9;ENSG00000088387|ENST00000682017|DOCK9;nc|ENSG00000088387|Q9BZ29-4|DOCK9;nc|ENSG00000088387|Q9BZ29-6|DOCK9	nc|ENSG00000088387|Q9BZ29-3|DOCK9	nc|ENSG00000088387|Q9BZ29-3|DOCK9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	536.3297119140625	2	536.329673	1070.64479	0.99432	0.00053328	-0.80089	-0.00042954	0.19343	0.00010374	536.3290959116383	17.537	0.39224	17.612	17.509	17.902	0.075441					32	14	3	0	0	0	0.24527	1	193	193		69.628	9.5094	1	262080			63626	1589	42317	42335	72179	72179					0.1122969377706795
VQKLLCKRKEV	11	Unmodified	_VQKLLCKRKEV_					0	0	0			REV__ENST00000524476.5_1_15:28882105-28886289:+|nuORF	REV__ENST00000524476.5_1_15:28882105-28886289:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6091613769531	3	448.611235	1342.81188	-1.3621	-0.00061104	-2.7229	-0.0012215	-4.085	-0.0018326	448.6097970890054	75.668	1.3969	75.668	74.988	76.385	0					143	49	4	0	0	0	0.76579	1	6879	6879		18.531	0	1	388770	+		63627	28162	42318	42336	72180	72180					0.15418218330273703
VQKRSLRLPI	10	Unmodified	_VQKRSLRLPI_					0	0	0		ENST00000466604.5_1_3:32001665-32001764:-|nuORF	ENST00000466604.5_1_3:32001665-32001764:-|nuORF	ENST00000466604.5_1_3:32001665-32001764:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9298400878906	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.86551	1	3900	3900		14.694	0	1	2612300			63628	12139	42319	42337	72181	72181					0.17569039722025082
VQKSLERYEYH	11	Unmodified	_VQKSLERYEYH_					0	0	0			REV__chr9:89311351-89315188|18|57.78|0.07|9.79|+|1|CKS2,None|1	REV__chr9:89311351-89315188|18|57.78|0.07|9.79|+|1|CKS2,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.57977294921875	3	484.580769	1450.72048	-0.87365	-0.00042336	-0.67813	-0.00032861	-1.5518	-0.00075196	484.5805983308426	15.119	0.30179	15.168	15.041	15.343	0.049079					32	12	3	0	0	0	0.71803	1	17	17		28.577	6.0151	1	100720	+		63629	15937	42320	42338	72182	72182					0.013146261666634018
VQKVTVSVE	9	Unmodified	_VQKVTVSVE_					0	0	0		ENST00000532247.5_1_16:3115647-3117689:+|nuORF;ENST00000532086.1_1_16:3115629-3115743:+|nuORF	ENST00000532247.5_1_16:3115647-3117689:+|nuORF	ENST00000532247.5_1_16:3115647-3117689:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7884216308594	2	494.787307	987.560061	1.0238	0.00050654	-0.61662	-0.0003051	0.40714	0.00020145	494.78703536390185	17.777	0.25032	17.853	17.718	17.968	0.075441					10	7	2	0	0	0	0.69624	1	217	217		40.778	2.9666	1	26519			63630	13372	42321	42339	72183	72183					0.06578323240432837
VQLAQSLRV	9	Unmodified	_VQLAQSLRV_					0	0	0			REV__nc|ENSG00000177548|Q9H5N1-2|RABEP2	REV__nc|ENSG00000177548|Q9H5N1-2|RABEP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.3080139160156	2	507.308741	1012.60293	1.7512	0.00088841	-1.6339	-0.00082888	0.11735	5.9535E-05	507.3077698105232	28.448	0.69688	28.275	27.934	28.631	-0.17336					37	17	3	0	0	0	0.78983	1	1740	1740		27.882	1.0861	1	310230	+		63631	22216	42322	42340	72184	72184					0.0971313808852301
VQLDTIKINGC	11	Carbamidomethyl (C)	_VQLDTIKINGC(Carbamidomethyl (C))_	VQLDTIKINGC(1)		VQLDTIKINGC(40)		0	1	0		nc|ENSG00000095110|Q8N323-2|NXPE1;ENSG00000095110|ENST00000534921|NXPE1	nc|ENSG00000095110|Q8N323-2|NXPE1	nc|ENSG00000095110|Q8N323-2|NXPE1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	630.8370971679688	2	630.834462	1259.65437	0.66995	0.00042263	-3.964	-0.0025006	-3.2941	-0.002078	630.8318230925483	60.928	1.5314	61.481	61.07	62.602	0.55355					91	41	3	0	0	0	0.638	1	6581	6581		40.058	8.5284	1	1114600			63632	1718	42323	42341	72185	72185	24				0.03493094000259589
VQLGYPEEE	9	Unmodified	_VQLGYPEEE_					0	0	0			REV__ENSG00000179532|ENST00000254579|DNHD1	REV__ENSG00000179532|ENST00000254579|DNHD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.333740234375	2	532.250754	1062.48696	-0.17255	-9.1841E-05	-0.17831	-9.4903E-05	-0.35086	-0.00018674	532.2504196541335	77.602	0.41711	78.171	77.923	78.34	0.56836					15	9	2	0	0	0	0.20789	1	8861	8861		40.778	0	1	112960	+		63633	22341	42324	42342	72186	72186					-0.0417885027286502
VQLLEPTLC	9	Unmodified	_VQLLEPTLC_					0	0	0			REV__nc|ENSG00000116641|Q96N67-7|DOCK7	REV__nc|ENSG00000116641|Q96N67-7|DOCK7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.2799987792969	2	508.27826	1014.54197	1.4316	0.00072764	2.4304	0.0012353	3.862	0.001963	508.2794059044545	88.484	3.8933	88.41	87.336	91.229	-0.074005					301	92	4	0	0	0	0.67345	1	9138	9138		42.396	8.2236	1	1903500	+		63634	18205	42325	42343	72187	72187					0.035278649940664764
VQLLQPLKLSL	11	Unmodified	_VQLLQPLKLSL_					0	0	0			REV__nc|ENSG00000160781|Q6TCH4-5|PAQR6	REV__nc|ENSG00000160781|Q6TCH4-5|PAQR6	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3797607421875	2	626.405381	1250.79621	-0.052827	-3.3091E-05	2.4911	0.0015604	2.4382	0.0015273	626.9075903889486	105.81	0.2959	105.81	105.64	105.93	0					8	6	2	0	0	0	0.17625	1	10951	10951		11.636	0	1	72010	+		63635	20739	42326	42344	72188	72188					0.18084255084886536
VQLLRPLSRVE	11	Unmodified	_VQLLRPLSRVE_					0	0	0		nc|ENSG00000123989|Q8IZ52-2|CHPF;nc|ENSG00000123989|Q8IZ52-4|CHPF;ENSG00000123989|ENST00000243776|CHPF	nc|ENSG00000123989|Q8IZ52-2|CHPF	nc|ENSG00000123989|Q8IZ52-2|CHPF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2676086425781	3	437.269866	1308.78777	-1.7045	-0.00074531	-2.8139	-0.0012304	-4.5184	-0.0019757	437.26854249177467	52.117	1.831	52.117	51.553	53.384	0					198	48	5	0	0	0	0.75779	1	4382	4382		20.315	4.3944	1	3449100			63636	3296	42327	42345	72189	72189					0.14572701168253843
VQLLRPLSRVE	11	Unmodified	_VQLLRPLSRVE_					0	0	0		nc|ENSG00000123989|Q8IZ52-2|CHPF;nc|ENSG00000123989|Q8IZ52-4|CHPF;ENSG00000123989|ENST00000243776|CHPF	nc|ENSG00000123989|Q8IZ52-2|CHPF	nc|ENSG00000123989|Q8IZ52-2|CHPF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2676696777344	3	437.269866	1308.78777	-1.6775	-0.00073351	-2.9878	-0.0013065	-4.6653	-0.00204	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.76087	1	4504	4504		19.627	1.0959	1	2305800			63637	3296	42327	42345	72190	72190					0.14572701168253843
VQLLRPLSRVE	11	Unmodified	_VQLLRPLSRVE_					0	0	0		nc|ENSG00000123989|Q8IZ52-2|CHPF;nc|ENSG00000123989|Q8IZ52-4|CHPF;ENSG00000123989|ENST00000243776|CHPF	nc|ENSG00000123989|Q8IZ52-2|CHPF	nc|ENSG00000123989|Q8IZ52-2|CHPF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2676696777344	3	437.269866	1308.78777	-1.5729	-0.00068777	-2.9102	-0.0012725	-4.483	-0.0019603	437.26848704129054	51.728	1.7031	51.763	51.285	52.988	0.034588					206	52	5	0	0	0	0.76384	1	4120	4120		18.966	0.43528	1	4358700			63638	3296	42327	42345	72191	72191					0.14572701168253843
VQLNVKSPE	9	Unmodified	_VQLNVKSPE_					0	0	0			REV__nc|ENSG00000151136|A6QL63-2|ABTB3	REV__nc|ENSG00000151136|A6QL63-2|ABTB3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.299560546875	2	507.284931	1012.55531	-0.76925	-0.00039023	2.1809	0.0011063	1.4117	0.00071611	507.285722069955	96.969	0.74274	96.969	96.723	97.466	0					22	16	2	0	0	0	0.20789	1	9710	9710		37.812	8.662	1	93120	+		63639	20237	42328	42346	72192	72192					0.04953439097664614
VQLQDNGY	8	Unmodified	_VQLQDNGY_					0	0	0		ENSG00000137975|ENST00000370565|CLCA2	ENSG00000137975|ENST00000370565|CLCA2	ENSG00000137975|ENST00000370565|CLCA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	468.7227783203125	2	468.724707	935.43486	-1.3692	-0.00064178	-1.4353	-0.00067274	-2.8045	-0.0013145	468.72390435574425	78.099	1.043	78.193	77.873	78.916	0.0942					75	34	3	0	0	0	0.89457	1	7322	7322		37.028	3.5129	1	698450			63640	4250	42329	42347	72193	72193					-0.03543968895951366
VQLRRGGG	8	Unmodified	_VQLRRGGG_					0	0	0			REV__nc|ENSG00000136715|Q9H0E3|SAP130	REV__nc|ENSG00000136715|Q9H0E3|SAP130	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.7518615722656	2	421.751393	841.488233	-1.7782	-0.00074997	4.1035	0.0017306	2.3252	0.00098067	421.75218958440666	77.386	3.85	77.511	77.102	80.952	0.12485					260	132	4	0	0	0	0.87922	1	7240	7240		31.955	1.4512	1	434130	+		63641	29874	42330	42348	72194	72194					0.06114873397245901
VQLRYLITT	9	Unmodified	_VQLRYLITT_					0	0	0			REV__ENST00000549302.1_1_12:101799535-101801423:-|nuORF	REV__ENST00000549302.1_1_12:101799535-101801423:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8299560546875	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.78058	1	8773	8773		30.504	2.6214	1	1844500	+		63642	18432	42331	42349	72195	72195					0.10094577919790026
VQLSEVVPV	9	Unmodified	_VQLSEVVPV_					0	0	0			REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2861022949219	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.646	1	74.778	74.278	75.278	0.13208								0	0	0	0.30778	1	6913	6913		27.882	1.1893	1		+		63643	28012	42332	42350	72196	72196					0.06871224728763536
VQLSILPV	8	Unmodified	_VQLSILPV_					0	0	0			REV__ENST00000456353.5_1_10:80721072-80808596:-|nuORF	REV__ENST00000456353.5_1_10:80721072-80808596:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.7802429199219	2	434.778754	867.542954	-0.14051	-6.1091E-05	3.4383	0.0014949	3.2978	0.0014338	434.7801225093181	38.257	1.3722	38.268	37.812	39.184	0.011173					116	31	4	0	0	0	0.84341	1	2708	2708		24.203	0	1	2138600	+		63644	26956	42333	42351	72197	72197					0.10388447425282266
VQLSPQMLYY	10	Unmodified	_VQLSPQMLYY_					0	0	0			REV__ENSG00000115365|ENST00000450366|LANCL1	REV__ENSG00000115365|ENST00000450366|LANCL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3145141601562	2	621.315374	1240.6162	-0.62331	-0.00038727	-1.8996	-0.0011802	-2.5229	-0.0015675	621.3140085474115	68.614	0.80863	68.647	68.364	69.173	0.033005					72	32	3	0	0	0	0.42393	1	6547	6547		62.107	20.681	1	488350	+		63645	18114	42334	42352	72198	72198					0.005512080856078683
VQLSPQMLYY	10	Unmodified	_VQLSPQMLYY_					0	0	0			REV__ENSG00000115365|ENST00000450366|LANCL1	REV__ENSG00000115365|ENST00000450366|LANCL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3151245117188	2	621.315374	1240.6162	0.63123	0.00039219	-3.4099	-0.0021186	-2.7787	-0.0017264	621.3133786370522	68.643	0.50154	68.772	68.523	69.024	0.12838					30	18	3	0	0	0	0.54701	1	6183	6183		52.937	5.2794	1	159260	+		63646	18114	42334	42352	72199	72199					0.005512080856078683
VQLTIELL	8	Unmodified	_VQLTIELL_					0	0	0		ENSG00000169375|ENST00000394947|SIN3A	ENSG00000169375|ENST00000394947|SIN3A	ENSG00000169375|ENST00000394947|SIN3A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7987976074219	2	464.789318	927.564084	-0.88537	-0.00041151	3.8254	0.001778	2.94	0.0013665	464.79098266785445	37.031	1.7451	36.978	35.836	37.581	-0.053558					86	38	3	0	0	0	0.84634	1	2515	2515		60.294	0	1	298640			63647	6491	42335	42353	72200	72200					0.09740412734140591
VQLTRRPG	8	Unmodified	_VQLTRRPG_					0	0	0			REV__ENSG00000164061|ENST00000296452|BSN	REV__ENSG00000164061|ENST00000296452|BSN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.7784118652344	2	463.780151	925.545748	-2.226	-0.0010324	-1.7375	-0.00080582	-3.9635	-0.0018382	463.77924988782166	40.526	1.7931	40.918	39.408	41.202	0.39209					79	45	2	0	0	0	0.93786	1	3418	3418		53.351	7.3792	1	9649600	+		63648	21019	42336	42354	72201	72201					0.07999715602795732
VQLVYFAV	8	Unmodified	_VQLVYFAV_					0	0	0			REV__ENST00000487869.1_1_21:40752343-40763801:+|nuORF	REV__ENST00000487869.1_1_21:40752343-40763801:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	469.7716979980469	2	469.770929	937.527304	-1.8101	-0.00085035	2.5337	0.0011903	0.7236	0.00033993	469.7719480948623	39.072	0.60578	39.072	38.816	39.422	0					23	14	2	0	0	0	0.90465	1	2469	2469		40.573	6.4001	1	91736	+		63649	27582	42337	42355	72202	72202					0.056041609082285504
VQLWLVLL	8	Unmodified	_VQLWLVLL_					0	0	0		ENSG00000139269|ENST00000266646|INHBE	ENSG00000139269|ENST00000266646|INHBE	ENSG00000139269|ENST00000266646|INHBE	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.27142333984375	2	492.318046	982.621539	-1.421	-0.0006996	-3.0315	-0.0014925	-4.4526	-0.0021921	492.31633325006095	48.17	0.60425	48.64	48.308	48.913	0.46941					28	14	3	0	0	0	0.4196	1	4647	4647		8.8223	0	1	616990			63650	4357	42338	42356	72203	72203					0.12953299730361323
VQMLSTHHA	9	Unmodified	_VQMLSTHHA_					0	0	0		nc|ENSG00000136715|Q9H0E3|SAP130;ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130	nc|ENSG00000136715|Q9H0E3|SAP130	nc|ENSG00000136715|Q9H0E3|SAP130	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2535400390625	2	512.255651	1022.49675	-0.38169	-0.00019552	-3.2458	-0.0016627	-3.6275	-0.0018582	512.2538769688313	54.312	1.3388	54.263	53.816	55.154	-0.049274					65	39	2	0	0	0	0.76764	1	4471	4471		34.173	2.2177	1	691410			63651	4130	42339	42357	72204	72204					-0.013599407484662152
VQMMRMMTKI	10	Unmodified	_VQMMRMMTKI_					0	0	0		ENST00000369577.7_1_6:87965292-87965355:+|nuORF	ENST00000369577.7_1_6:87965292-87965355:+|nuORF	ENST00000369577.7_1_6:87965292-87965355:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	635.3262939453125	2	634.820932	1267.62731	1.0179	0.00064617	4.2079	0.0026713	5.2258	0.0033174	634.8235814603577	58.717	0.87555	59.27	59.006	59.881	0.55323					34	21	2	0	0	0	0.27582	1	6191	6191		75.043	4.2271	1	806320			63652	10622	42340	42358	72205	72205					0.004202475922056692
VQMPAAIL	8	Unmodified	_VQMPAAIL_					0	0	0		ENST00000529955.5_1_11:66281964-66299243:+|nuORF;ENSG00000174483|ENST00000318312|BBS1;nc|ENSG00000174483|Q8NFJ9-2|BBS1;ENST00000527959.1_1_11:66290957-66294394:+|nuORF	ENST00000529955.5_1_11:66281964-66299243:+|nuORF	ENST00000529955.5_1_11:66281964-66299243:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.73974609375	2	421.743857	841.47316	-1.384	-0.0005837	-3.1833	-0.0013425	-4.5673	-0.0019262	421.74257678570456	74.048	0.42603	74.134	73.927	74.353	0.085907					29	19	2	0	0	0	0.884	1	6797	6797		33.516	0.022601	1	153160			63653	6938	42341	42359	72206	72206					0.04608245485007956
VQMPAAIL	8	Unmodified	_VQMPAAIL_					0	0	0		ENST00000529955.5_1_11:66281964-66299243:+|nuORF;ENSG00000174483|ENST00000318312|BBS1;nc|ENSG00000174483|Q8NFJ9-2|BBS1;ENST00000527959.1_1_11:66290957-66294394:+|nuORF	ENST00000529955.5_1_11:66281964-66299243:+|nuORF	ENST00000529955.5_1_11:66281964-66299243:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	421.743857	841.47316	-1.3822	-0.00058295	-2.7904	-0.0011768	-4.1727	-0.0017598	421.7425981305128	74.288	0.44503	74.288	74.092	74.537	0	0.2346	0.0019626	NaN	33.516	25	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	64996			63654	6938	42341	42359							0.04608245485007956
VQMPAAIL	8	Unmodified	_VQMPAAIL_					0	0	0		ENST00000529955.5_1_11:66281964-66299243:+|nuORF;ENSG00000174483|ENST00000318312|BBS1;nc|ENSG00000174483|Q8NFJ9-2|BBS1;ENST00000527959.1_1_11:66290957-66294394:+|nuORF	ENST00000529955.5_1_11:66281964-66299243:+|nuORF	ENST00000529955.5_1_11:66281964-66299243:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	421.743857	841.47316	-1.7867	-0.00075354	-3.5145	-0.0014822	-5.3013	-0.0022358	421.74278378136694	73.864	0.4873	73.991	73.87	74.357	0.12711	-0.062376	0.0013518	NaN	33.516	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96773			63655	6938	42341	42359							0.04608245485007956
VQMPAAIL	8	Unmodified	_VQMPAAIL_					0	0	0		ENST00000529955.5_1_11:66281964-66299243:+|nuORF;ENSG00000174483|ENST00000318312|BBS1;nc|ENSG00000174483|Q8NFJ9-2|BBS1;ENST00000527959.1_1_11:66290957-66294394:+|nuORF	ENST00000529955.5_1_11:66281964-66299243:+|nuORF	ENST00000529955.5_1_11:66281964-66299243:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	421.743857	841.47316	0.14373	6.0615E-05	-5.2756	-0.0022249	-5.1319	-0.0021643	421.74159679080236	73.436	0.31313	73.989	73.923	74.236	0.55386	-0.063957	-0.00013365	NaN	33.516	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181010			63656	6938	42341	42359							0.04608245485007956
VQNERSTKK	9	Unmodified	_VQNERSTKK_					0	0	0			REV__nc|ENSG00000074590|O60285-2|NUAK1	REV__nc|ENSG00000074590|O60285-2|NUAK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3062133789062	2	545.304187	1088.59382	1.622	0.00088447	1.7254	0.00094085	3.3473	0.0018253	545.3051122101872	24.517	1.7889	24.003	23.196	24.985	-0.51365					105	40	6	0	0	0	0.69624	1	1240	1240		40.778	1.972	1	6709400	+		63657	29710	42342	42360	72207	72207					0.053067447322064254
VQNGTLRIR	9	Unmodified	_VQNGTLRIR_					0	0	0		nc|ENSG00000085552|Q9P2J2-2|IGSF9;ENSG00000085552|ENST00000368094|IGSF9;ENST00000476102.1_1_1:159900586-159913268:-|nuORF	nc|ENSG00000085552|Q9P2J2-2|IGSF9	nc|ENSG00000085552|Q9P2J2-2|IGSF9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.8345947265625	2	528.817264	1055.61998	-0.34604	-0.00018299	0.62234	0.00032911	0.2763	0.00014611	528.817512011613	29.576	0.606	29.547	29.3	29.906	-0.029207					25	13	3	0	0	0	0.20789	1	1905	1905		17.365	0	1	115620			63658	1533	42343	42361	72208	72208					0.09439058694306368
VQNILKIGF	9	Unmodified	_VQNILKIGF_					0	0	0		ENST00000469698.5_1_17:39981777-39991902:-|nuORF;nc|ENSG00000141698|Q969T7-2|NT5C3B;ENSG00000141698|ENST00000435506|NT5C3B	ENST00000469698.5_1_17:39981777-39991902:-|nuORF	ENST00000469698.5_1_17:39981777-39991902:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3165893554688	2	516.316035	1030.61752	0.66914	0.00034549	-1.002	-0.00051733	-0.33283	-0.00017185	516.3153400716644	84.185	0.72745	84.333	83.962	84.69	0.14793					37	16	3	0	0	0	0.62081	1	8183	8183		45.952	8.7928	1	242850			63659	4524	42344	42362	72209	72209					0.10343210236646883
VQPANTPL	8	Unmodified	_VQPANTPL_					0	0	0		ENSG00000165323|ENST00000525166|FAT3;nc|ENSG00000165323|Q8TDW7|FAT3	ENSG00000165323|ENST00000525166|FAT3	ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.23541259765625	2	420.23471	838.454868	-1.214	-0.00051016	1.5502	0.00065144	0.3362	0.00014128	420.2350769123264	38.639	0.62205	38.592	38.33	38.952	-0.047001					29	13	3	0	0	0	0.66521	1	2717	2717		68.787	8.4929	1	100740			63660	6072	42345	42363	72210	72210					0.029178268346640834
VQPGRPLRQL	10	Unmodified	_VQPGRPLRQL_					0	0	0			REV__ENST00000528698.5_1_11:407426-409994:-|nuORF	REV__ENST00000528698.5_1_11:407426-409994:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.353759765625	2	582.354014	1162.69348	3.1803	0.0018521	-4.2471	-0.0024733	-1.0667	-0.00062122	582.3514461543166	103.53	4.546	103.48	102.99	107.54	-0.043755					434	108	7	0	0	0	0.80179	1	11789	11789		39.253	16.21	1	77008000	+		63661	28252	42346	42364	72211	72211					0.1186360713677459
VQPGRYQRAN	10	Unmodified	_VQPGRYQRAN_					0	0	0			REV__ENST00000484791.1_1_3:43373671-43382028:+|nuORF	REV__ENST00000484791.1_1_3:43373671-43382028:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	594.8519897460938	2	594.815253	1187.61595	-0.67279	-0.00040019	0.63874	0.00037993	-0.034058	-2.0258E-05	594.8148859967433	45.721	0.32588	46.193	45.968	46.294	0.47139					9	7	2	0	0	0	0.37624	1	4271	4271		19.997	0	1	218970	+		63662	27517	42347	42365	72212	72212					0.029649692006159967
VQPHHRLW	8	Unmodified	_VQPHHRLW_					0	0	0			REV__ENST00000467388.1_1_2:216203501-216211697:+|nuORF	REV__ENST00000467388.1_1_2:216203501-216211697:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	537.3390502929688	2	536.793592	1071.57263	-1.1103	-0.00059601	1.2181	0.00065384	0.10774	5.7835E-05	537.2959737875575	43.296	1.1419	43.73	42.924	44.066	0.4334					39	27	2	0	0	0	0.4196	1	3837	3837		13.775	0	1	672390	+		63663	19462	42348	42366	72213	72213					0.0397082421397954
VQPLKAGAS	9	Unmodified	_VQPLKAGAS_					0	0	0			REV__ENST00000609439.2_2_7:45849579-45850077:+|nuORF	REV__ENST00000609439.2_2_7:45849579-45850077:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.7547912597656	2	435.75581	869.497067	0.19203	8.3677E-05	-3.1627	-0.0013782	-2.9707	-0.0012945	435.7543509349436	78.035	1.1687	78.598	77.699	78.868	0.56332					54	27	3	0	0	0	0.7932	1	8945	8945		26.693	1.1189	1	812270	+		63664	29415	42349	42367	72214	72214					0.0570980224304094
VQPLRLSEVLR	11	Unmodified	_VQPLRLSEVLR_					0	0	0			REV__ENSG00000083097|ENST00000349129|DOP1A	REV__ENSG00000083097|ENST00000349129|DOP1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26812744140625	3	437.269866	1308.78777	-0.34848	-0.00015238	-4.3855	-0.0019176	-4.7339	-0.00207	437.26783788235974	49.466	1.602	49.926	49.459	51.061	0.45983					122	38	5	0	0	0	0.73277	1	4799	4799		25.892	0.76573	1	4698000	+		63665	16847	42350	42368	72215	72215					0.1457270116827658
VQPRRLLQRIR	11	Unmodified	_VQPRRLLQRIR_					0	0	0			REV__nc|ENSG00000167612|Q7Z3H0-1|ANKRD33	REV__nc|ENSG00000167612|Q7Z3H0-1|ANKRD33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.97509765625	3	478.975788	1433.90553	0.41435	0.00019846	-3.1102	-0.0014897	-2.6958	-0.0012912	478.97418301228686	59.896	1.7532	60.013	59.324	61.077	0.11676					110	60	3	0	0	0	0.81892	1	5201	5201		8.0344	1.7135	1	131420	+		63666	21404	42351	42369	72216	72216					0.2059369854760007
VQPRRLLQRIR	11	Unmodified	_VQPRRLLQRIR_					0	0	0			REV__nc|ENSG00000167612|Q7Z3H0-1|ANKRD33	REV__nc|ENSG00000167612|Q7Z3H0-1|ANKRD33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9744873046875	3	478.975788	1433.90553	-0.25402	-0.00012167	-2.023	-0.00096899	-2.2771	-0.0010907	478.9747709878051	47.62	1.4426	47.532	47.242	48.685	-0.087646					53	40	2	0	0	0	0.81219	1	3725	3725		8.7993	0.39205	1	370120	+		63667	21404	42351	42369	72217	72217					0.2059369854760007
VQPSVIIL	8	Unmodified	_VQPSVIIL_					0	0	0		nc|ENSG00000094841|Q96BW1-3|UPRT;ENST00000462237.5_1_X:74514443-74523343:+|nuORF;ENSG00000094841|ENST00000373383|UPRT	nc|ENSG00000094841|Q96BW1-3|UPRT	nc|ENSG00000094841|Q96BW1-3|UPRT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7801818847656	2	434.778754	867.542954	1.5094	0.00065624	1.8704	0.00081321	3.3798	0.0014694	434.7794635539601	36.504	1.1186	36.944	36.745	37.863	0.44043					77	26	3	0	0	0	0.85277	1	2985	2985		25.45	0	1	5607300			63668	1713	42352	42370	72218	72218					0.10388447425293634
VQQAMMRS	8	Oxidation (M)	_VQQAMM(Oxidation (M))RS_		VQQAM(0.037)M(0.963)RS		VQQAM(-14)M(14)RS	0	0	1			REV__nc|ENSG00000113734|Q12981-2|BNIP1	REV__nc|ENSG00000113734|Q12981-2|BNIP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.72991943359375	2	483.728412	965.442271	0.4113	0.00019896	0.47221	0.00022842	0.88351	0.00042738	483.72849962740975	76.153	1.1623	76.553	75.914	77.077	0.39969					46	28	2	0	0	0	0.93293	1	8657	8657		51.335	10.763	2	362680	+		63669	18011	42353	42371	72219	72219					-0.041832758915120394
VQQEVVVSY	9	Unmodified	_VQQEVVVSY_					0	0	0		ENSG00000103740|ENST00000258873|ACSBG1	ENSG00000103740|ENST00000258873|ACSBG1	ENSG00000103740|ENST00000258873|ACSBG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.776123046875	2	525.776939	1049.53933	-0.31827	-0.00016734	-0.53621	-0.00028192	-0.85447	-0.00044926	525.7765127703135	60.53	0.77576	60.919	60.444	61.219	0.38945					28	15	2	0	0	0	0.69624	1	6434	6434		40.778	1.5253	1	1140900			63670	2099	42354	42372	72220	72220					0.016537328607682866
VQQKVVTLLSD	11	Unmodified	_VQQKVVTLLSD_					0	0	0		ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	615.35791015625	2	615.358628	1228.7027	-1.2393	-0.00076262	-0.58184	-0.00035804	-1.8212	-0.0011207	615.3583728067321	104.45	3.3275	104.55	104.1	107.43	0.093857					191	81	4	0	0	0	0.7434	1	11019	11019		23.523	0	1	3359300			63671	8058	42355	42373	72221	72221					0.09749910911796178
VQQPGTPI	8	Unmodified	_VQQPGTPI_					0	0	0			REV__ENSG00000010327|ENST00000321725|STAB1	REV__ENSG00000010327|ENST00000321725|STAB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.23504638671875	2	420.23471	838.454868	0.72887	0.0003063	-0.40206	-0.00016896	0.32681	0.00013734	420.23432070824424	38.593	0.61893	38.605	38.358	38.976	0.011173					28	13	3	0	0	0	0.5397	1	2661	2661		73.975	0	1	144400	+		63672	16166	42356	42374	72222	72222					0.029178268346640834
VQQSCLADH	9	Unmodified	_VQQSCLADH_					0	0	0		ENST00000532096.1_1_11:614111-615490:-|nuORF;nc|ENSG00000185507|Q92985-2|IRF7;ENSG00000185507|ENST00000525445|IRF7;nc|ENSG00000185507|Q92985-4|IRF7;ENST00000527160.1_1_11:614111-614513:-|nuORF	ENST00000532096.1_1_11:614111-615490:-|nuORF	ENST00000532096.1_1_11:614111-615490:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.8193664550781	2	500.729466	999.444379	-0.82787	-0.00041454	1.4813	0.00074175	0.65346	0.00032721	500.7300693691296	46.869	0.43024	47.792	47.651	48.081	0.92315					16	9	2	0	0	0	0.20789	1	4474	4474		14.865	10.88	1	337920			63673	7719	42357	42375	72223	72223					-0.055365238820854756
VQQVAKIDSG	10	Unmodified	_VQQVAKIDSG_					0	0	0			REV__nc|ENSG00000187790|Q8IYD8-2|FANCM	REV__nc|ENSG00000187790|Q8IYD8-2|FANCM	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.788818359375	2	522.787838	1043.56112	1.1412	0.00059661	-0.11277	-5.8955E-05	1.0284	0.00053766	522.7869355715242	19.07	0.51676	18.595	18.407	18.923	-0.47468					33	11	4	0	0	0	0.73395	1	466	466		42.864	0	1	105950	+		63674	22949	42358	42376	72224	72224					0.04108537609317864
VQQVAKIDSG	10	Unmodified	_VQQVAKIDSG_					0	0	0			REV__nc|ENSG00000187790|Q8IYD8-2|FANCM	REV__nc|ENSG00000187790|Q8IYD8-2|FANCM	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	522.787838	1043.56112	1.1412	0.00059661	-0.11277	-5.8955E-05	1.0284	0.00053766	522.7869355715242	19.07	0.51676	18.595	18.407	18.923	-0.47468	-0.04723	-0.00066106	NaN	42.864	33	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105950	+		63675	22949	42358	42376							0.04108537609317864
VQQVAKIDSG	10	Unmodified	_VQQVAKIDSG_					0	0	0			REV__nc|ENSG00000187790|Q8IYD8-2|FANCM	REV__nc|ENSG00000187790|Q8IYD8-2|FANCM	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	522.787838	1043.56112	0.23717	0.00012399	1.2809	0.00066963	1.5181	0.00079362	522.7875893436646	19.319	0.53619	18.69	18.401	18.937	-0.6296	0.04723	0.00079612	NaN	42.864	26	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88475	+		63676	22949	42358	42376							0.04108537609317864
VQREPALLSC	10	Unmodified	_VQREPALLSC_					0	0	0			REV__nc|ENSG00000174791|Q13671-2|RIN1	REV__nc|ENSG00000174791|Q13671-2|RIN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.7962036132812	2	558.297516	1114.58048	-0.69832	-0.00038987	-3.25	-0.0018144	-3.9483	-0.0022043	558.2955770012961	42.686	0.52574	42.648	42.357	42.882	-0.038223					24	12	3	0	0	0	0.57924	1	3280	3280		51.193	7.0759	1	226640	+		63677	22014	42359	42377	72225	72225					0.027771706285875553
VQRGRKTLF	9	Unmodified	_VQRGRKTLF_					0	0	0			REV__ENSG00000276085|ENST00000619989|CCL3L3	REV__ENSG00000276085|ENST00000619989|CCL3L3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	552.832275390625	2	552.835457	1103.65636	-0.73052	-0.00040386	-2.0385	-0.0011269	-2.769	-0.0015308	552.8344975147925	83.134	0.85608	83.134	82.73	83.586	0					37	21	2	0	0	0	0.7932	1	7811	7811		20.947	0.95016	1	88048	+		63678	24016	42360	42378	72226	72226					0.10867935591022615
VQRLRSAKELL	11	Unmodified	_VQRLRSAKELL_					0	0	0		ENST00000591316.1_1_1:16804748-16809819:-|nuORF;nc|ENSG00000290842|Q8IVE0|CROCCP3;ENST00000591348.5_1_1:16802327-16812083:-|nuORF	ENST00000591316.1_1_1:16804748-16809819:-|nuORF	ENST00000591316.1_1_1:16804748-16809819:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2727355957031	3	438.273499	1311.79867	2.0592	0.0009025	-3.1977	-0.0014014	-1.1384	-0.00049895	438.27198607190746	106.29	0.8153	106.33	105.9	106.72	0.03688					74	18	5	0	0	0	0.73277	1	11666	11666		25.892	6.629	1	4519600			63679	14270	42361	42379	72227	72227					0.1552410354256608
VQRLRSAKELL	11	Unmodified	_VQRLRSAKELL_					0	0	0		ENST00000591316.1_1_1:16804748-16809819:-|nuORF;nc|ENSG00000290842|Q8IVE0|CROCCP3;ENST00000591348.5_1_1:16802327-16812083:-|nuORF	ENST00000591316.1_1_1:16804748-16809819:-|nuORF	ENST00000591316.1_1_1:16804748-16809819:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2729187011719	3	438.273499	1311.79867	0.73902	0.00032389	-1.8768	-0.00082255	-1.1378	-0.00049865	438.27258626082147	106.07	0.86208	106.16	105.83	106.7	0.099007					90	20	5	0	0	0	0.73647	1	11408	11408		25.068	1.5451	1	9065500			63680	14270	42361	42379	72228	72228					0.1552410354256608
VQRVLALRIR	10	Unmodified	_VQRVLALRIR_					0	0	0			REV__ENST00000609682.1_1_3:101395365-101395752:+|nuORF	REV__ENST00000609682.1_1_3:101395365-101395752:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	409.2921142578125	3	408.606813	1222.79861	1.6473	0.00067308	-2.6964	-0.0011018	-1.0492	-0.0004287	408.6054081769851	20.012	1.365	19.542	19.019	20.384	-0.46967					49	29	2	0	0	0	0.37624	1	600	600		6.6596	0	1	248270	+		63681	29417	42362	42380	72229	72229					0.19612148333180812
VQRWIRGFLVR	11	Unmodified	_VQRWIRGFLVR_					0	0	0		nc|ENSG00000162620|A6PVS8-2|LRRIQ3;ENSG00000162620|ENST00000354431|LRRIQ3	nc|ENSG00000162620|A6PVS8-2|LRRIQ3	nc|ENSG00000162620|A6PVS8-2|LRRIQ3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.62298583984375	3	477.289484	1428.84662	2.812	0.0013421	2.7512	0.0013131	5.5632	0.0026552	477.29081792510675	112.87	0.60251	112.85	112.7	113.3	-0.024811					21	14	2	0	0	0	0.18216	1	12474	12474		9.6461	0	1	750090			63682	5707	42363	42381	72230	72230					0.14935222253234315
VQRYETYRWIV	11	Unmodified	_VQRYETYRWIV_					0	0	0		ENST00000487138.5_1_2:95944617-95954741:+|nuORF;nc|ENSG00000155066|Q8N271-2|PROM2;ENSG00000155066|ENST00000317620|PROM2	ENST00000487138.5_1_2:95944617-95954741:+|nuORF	ENST00000487138.5_1_2:95944617-95954741:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.2745361328125	3	504.936776	1511.7885	-0.50503	-0.00025501	2.9927	0.0015111	2.4877	0.0012561	504.93822048751315	56.717	0.75676	56.789	56.58	57.336	0.071835					73	35	3	0	0	0	0.74405	1	4772	4772		23.378	0.81632	1	653270			63683	5309	42364	42382	72231	72231					0.05307495817328345
VQRYTRRVF	9	Unmodified	_VQRYTRRVF_					0	0	0			REV__ENSG00000167306|ENST00000285039|MYO5B	REV__ENSG00000167306|ENST00000285039|MYO5B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	612.8795776367188	2	612.851638	1223.68872	0.91295	0.0005595	2.5404	0.0015569	3.4534	0.0021164	612.8529639922347	104.34	0.24055	104.46	104.24	104.48	0.11685					17	5	4	0	0	0	0.20789	1	11056	11056		35.618	6.4482	1	568740	+		63684	21375	42365	42383	72232	72232					0.08582722994015057
VQSNLNPL	8	Unmodified	_VQSNLNPL_					0	0	0			REV__nc|ENSG00000064042|Q9UPQ0-10|LIMCH1	REV__nc|ENSG00000064042|Q9UPQ0-10|LIMCH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.7445373535156	2	442.745442	883.476331	-1.3973	-0.00061863	0.07774	3.4419E-05	-1.3195	-0.00058421	442.74530501109706	89.198	0.64397	89.405	89.043	89.687	0.20731					39	14	3	0	0	0	0.89962	1	8899	8899		38.806	5.2906	1	1011400	+		63685	29699	42366	42384	72233	72233					0.029932118633610116
VQSNLNPL	8	Unmodified	_VQSNLNPL_					0	0	0			REV__nc|ENSG00000064042|Q9UPQ0-10|LIMCH1	REV__nc|ENSG00000064042|Q9UPQ0-10|LIMCH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7447509765625	2	442.745442	883.476331	0.24971	0.00011056	-1.799	-0.0007965	-1.5493	-0.00068594	442.74454650481835	88.729	0.69301	89.178	88.753	89.446	0.44892					54	16	4	0	0	0	0.9295	1	10437	10437		55.504	7.5886	1	6816600	+		63686	29699	42366	42384	72234	72234					0.029932118633610116
VQSNVRPEVL	10	Unmodified	_VQSNVRPEVL_					0	0	0			REV__ENST00000356949.2_6:167358247-167358364:-|nuORF	REV__ENST00000356949.2_6:167358247-167358364:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.8236083984375	2	570.822212	1139.62987	0.47648	0.00027199	3.3136	0.0018915	3.7901	0.0021635	570.824103297056	61.379	0.88304	61.486	61.341	62.225	0.10743					65	40	2	0	0	0	0.70553	1	5374	5374		44.377	1.5129	1	1285800	+		63687	25397	42367	42385	72235	72235					0.06564201909031908
VQSPGAQSY	9	Unmodified	_VQSPGAQSY_					0	0	0		ENST00000295087.12_1_2:152671685-152684667:-|nuORF	ENST00000295087.12_1_2:152671685-152684667:-|nuORF	ENST00000295087.12_1_2:152671685-152684667:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232666015625	2	468.724707	935.43486	-0.58063	-0.00027215	-3.1666	-0.0014842	-3.7472	-0.0017564	468.72346030200146	77.011	2.0488	77.579	77.289	79.337	0.56836					141	50	5	0	0	0	0.51307	1	8794	8794		51.335	0	1	13648000			63688	9713	42368	42386	72236	72236					-0.03543968895951366
VQSPPTETLGV	11	Unmodified	_VQSPPTETLGV_					0	0	0		ENSG00000069206|ENST00000175238|ADAM7	ENSG00000069206|ENST00000175238|ADAM7	ENSG00000069206|ENST00000175238|ADAM7	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	564.635498046875	2	564.300778	1126.587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.47	1	50.52	50.02	51.02	0.049896								0	0	0	0.56276	1	3970	3970		31.53	2.3598	1				63689	1215	42369	42387	72237	72237					0.02877387060948422
VQSPQGQQRRV	11	Unmodified	_VQSPQGQQRRV_					0	0	0			REV__chr7:158876691-158879690|18|13.33|0.09|7.19|+|2|DYNC2I1,None|2	REV__chr7:158876691-158879690|18|13.33|0.09|7.19|+|2|DYNC2I1,None|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.365234375	2	641.852367	1281.69018	7.1265	0.0045742	4.1226	0.0026461	11.249	0.0072203	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.65746	1	13742	13742		37.812	3.8899	1	98705	+		63690	15906	42370	42388	72238	72238					0.06060312292106573
VQSSLRPLLRP	11	Unmodified	_VQSSLRPLLRP_					0	0	0			REV__ENST00000603037.2_2_X:73423607-73423670:-|nuORF	REV__ENST00000603037.2_2_X:73423607-73423670:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	633.3839111328125	2	633.388054	1264.76155	-0.18394	-0.0001165	-4.2182	-0.0026717	-4.4021	-0.0027882	633.3853758780649	57.013	1.0689	57.046	56.666	57.735	0.033184					61	35	2	0	0	0	0.69071	1	5166	5166		17.468	11.547	1	142320	+		63691	29342	42371	42389	72239	72239					0.13976431996775318
VQTLVHLKFPT	11	Unmodified	_VQTLVHLKFPT_					0	0	0		ENSG00000263761|ENST00000581492|GDF2	ENSG00000263761|ENST00000581492|GDF2	ENSG00000263761|ENST00000581492|GDF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8818969726562	2	641.87953	1281.74451	0.91411	0.00058675	3.6201	0.0023236	4.5342	0.0029104	641.8817089370607	97.519	4.4101	97.68	96.616	101.03	0.16074					328	102	5	0	0	0	0.72739	1	10028	10028		27.047	3.5246	1	4136300			63692	8940	42372	42390	72240	72240					0.11490511390979918
VQTVLPLV	8	Unmodified	_VQTVLPLV_					0	0	0		nc|ENSG00000033011|Q9BT22-2|ALG1;ENSG00000033011|ENST00000262374|ALG1;ENST00000482834.1_1_3:155761946-155762456:-|nuORF	nc|ENSG00000033011|Q9BT22-2|ALG1	nc|ENSG00000033011|Q9BT22-2|ALG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	434.7801208496094	2	434.778754	867.542954	-0.054742	-2.3801E-05	3.4027	0.0014794	3.3479	0.0014556	434.7801068978087	37.95	1.5641	37.892	37.507	39.071	-0.057915					157	49	4	0	0	0	0.81548	1	2342	2342		20.482	0	1	2486400			63693	887	42373	42391	72241	72241					0.10388447425282266
VQTYDSIARTT	11	Unmodified	_VQTYDSIARTT_					0	0	0			REV__ENSG00000249853|ENST00000312719|HS3ST5	REV__ENSG00000249853|ENST00000312719|HS3ST5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	627.8185424804688	2	627.819867	1253.62518	-0.90656	-0.00056916	-0.2388	-0.00014993	-1.1454	-0.00071908	627.8196656261982	44.074	0.59366	44.074	43.823	44.416	0					22	13	2	0	0	0	0.59499	1	3170	3170		45.022	4.244	1	184610	+		63694	23868	42374	42392	72242	72242					0.0085127297559211
VQTYDSIARTT	11	Unmodified	_VQTYDSIARTT_					0	0	0			REV__ENSG00000249853|ENST00000312719|HS3ST5	REV__ENSG00000249853|ENST00000312719|HS3ST5	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	627.819867	1253.62518	-0.90656	-0.00056916	-0.2388	-0.00014993	-1.1454	-0.00071908	627.8196656261982	44.074	0.59366	44.074	43.823	44.416	0	-0.166	0.00049922	NaN	45.022	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	184610	+		63695	23868	42374	42392							0.0085127297559211
VQTYDSIARTT	11	Unmodified	_VQTYDSIARTT_					0	0	0			REV__ENSG00000249853|ENST00000312719|HS3ST5	REV__ENSG00000249853|ENST00000312719|HS3ST5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	627.819867	1253.62518	0.11885	7.4617E-05	-1.2344	-0.00077495	-1.1155	-0.00070033	627.8189196482526	44.408	0.34883	44.385	44.22	44.569	-0.023079	0.14471	-0.00075083	NaN	45.022	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66948	+		63696	23868	42374	42392							0.0085127297559211
VQTYDSIARTT	11	Unmodified	_VQTYDSIARTT_					0	0	0			REV__ENSG00000249853|ENST00000312719|HS3ST5	REV__ENSG00000249853|ENST00000312719|HS3ST5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	627.819867	1253.62518	1.2895	0.00080955	-1.6187	-0.0010162	-0.32921	-0.00020668	628.3208952616152	44.26	0.49627	44.269	44.009	44.505	0.0084534	0.028981	-0.0012334	NaN	45.022	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105870	+		63697	23868	42374	42392							0.0085127297559211
VQTYDSIARTT	11	Unmodified	_VQTYDSIARTT_					0	0	0			REV__ENSG00000249853|ENST00000312719|HS3ST5	REV__ENSG00000249853|ENST00000312719|HS3ST5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	627.819867	1253.62518	0.41754	0.00026214	-0.47253	-0.00029667	-0.054993	-3.4526E-05	627.8191272262687	44.242	0.44975	44.291	44.045	44.495	0.048996	0.050971	0.00020574	NaN	45.022	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	160410	+		63698	23868	42374	42392							0.0085127297559211
VQTYDSIARTT	11	Unmodified	_VQTYDSIARTT_					0	0	0			REV__ENSG00000249853|ENST00000312719|HS3ST5	REV__ENSG00000249853|ENST00000312719|HS3ST5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	627.819867	1253.62518	0.35707	0.00022417	-0.53318	-0.00033474	-0.17612	-0.00011057	627.8189619318905	44.239	0.68457	44.181	43.838	44.522	-0.058262	-0.058663	0.00012958	NaN	45.022	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162890	+		63699	23868	42374	42392							0.0085127297559211
VQVDPLLGQLL	11	Unmodified	_VQVDPLLGQLL_					0	0	0			REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1	REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	597.8560180664062	2	597.858264	1193.70197	-0.35529	-0.00021242	-2.6795	-0.001602	-3.0348	-0.0018144	597.8563669616714	92.734	2.834	92.734	91.225	94.059	0					173	56	4	0	0	0	0.60058	1	9135	9135		44.377	1.5129	1	1224100	+		63700	17290	42375	42393	72243	72243					0.11287116262769814
VQVDPLLGQLL	11	Unmodified	_VQVDPLLGQLL_					0	0	0			REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1	REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8558349609375	2	597.858264	1193.70197	-0.56225	-0.00033615	-2.7782	-0.001661	-3.3405	-0.0019971	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.66929	1	9611	9611		36.447	1.2947	1	2042000	+		63701	17290	42375	42393	72244	72244					0.11287116262769814
VQVEVLLL	8	Unmodified	_VQVEVLLL_					0	0	0		ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7913818359375	2	456.791861	911.569169	0.23747	0.00010847	2.1705	0.00099146	2.408	0.0010999	456.79269786067573	42.365	2.4539	42.43	41.781	44.235	0.065037					168	63	3	0	0	0	0.82419	1	2918	2918		13.775	0	1	556840			63702	3770	42376	42394	72245	72245					0.10984716596760791
VQVGSSSVAY	10	Unmodified	_VQVGSSSVAY_					0	0	0		ENST00000380250.7_2_13:32605479-32605650:+|nuORF	ENST00000380250.7_2_13:32605479-32605650:+|nuORF	ENST00000380250.7_2_13:32605479-32605650:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.75299072265625	2	498.753464	995.492375	1.4332	0.00071481	-1.2597	-0.00062827	0.17351	8.6536E-05	498.75268932975655	35.92	0.58378	36.361	36.074	36.658	0.44043					41	14	4	0	0	0	0.6116	1	2818	2818		49.442	1.5259	1	2284800			63703	10916	42377	42395	72246	72246					-0.0055512669038080276
VQVHKKML	8	Unmodified	_VQVHKKML_					0	0	0			REV__ENSG00000141449|ENST00000424526|GREB1L	REV__ENSG00000141449|ENST00000424526|GREB1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7955627441406	2	491.796955	981.579357	-0.12437	-6.1163E-05	-2.4892	-0.0012242	-2.6135	-0.0012853	491.7955803973609	45.417	1.3583	45.348	44.556	45.914	-0.06863					81	33	3	0	0	0	0.86288	1	3214	3214		26.796	5.0938	1	439300	+		63704	19687	42378	42396	72247	72247					0.08783001050335315
VQVILLPE	8	Unmodified	_VQVILLPE_					0	0	0		ENST00000511850.1_1_5:138858703-138860965:-|nuORF;ENST00000507297.5_1_5:138858703-138860606:-|nuORF	ENST00000511850.1_1_5:138858703-138860965:-|nuORF	ENST00000511850.1_1_5:138858703-138860965:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.3006286621094	2	455.784036	909.553519	-0.21161	-9.6447E-05	2.9292	0.0013351	2.7176	0.0012386	455.7850059052271	44.445	0.86607	44.387	44.043	44.909	-0.058258					33	20	2	0	0	0	0.4196	1	3202	3202		17.365	9.1337	1	62359			63705	13026	42379	42397	72248	72248					0.0951243007971243
VQVKGGRP	8	Unmodified	_VQVKGGRP_					0	0	0		ENST00000409875.5_1_2:114384945-114385508:+|nuORF	ENST00000409875.5_1_2:114384945-114385508:+|nuORF	ENST00000409875.5_1_2:114384945-114385508:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.755126953125	2	420.756144	839.497735	-1.8952	-0.0007974	-0.59321	-0.0002496	-2.4884	-0.001047	420.75579416819653	20.848	1.2575	20.894	19.905	21.163	0.045401					83	61	2	0	0	0	0.85277	1	517	517		25.45	4.9683	1	128270			63706	11319	42380	42398	72249	72249					0.07156641682752252
VQVKGGRP	8	Unmodified	_VQVKGGRP_					0	0	0		ENST00000409875.5_1_2:114384945-114385508:+|nuORF	ENST00000409875.5_1_2:114384945-114385508:+|nuORF	ENST00000409875.5_1_2:114384945-114385508:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.7536926269531	2	420.756144	839.497735	0.012717	5.3507E-06	-2.3289	-0.00097989	-2.3162	-0.00097454	420.7550362120359	20.612	1.2168	20.688	19.803	21.02	0.07585					93	60	2	0	0	0	0.83058	1	486	486		12.959	0	1	151820			63707	11319	42380	42398	72250	72250					0.07156641682752252
VQVKGSSRP	9	Unmodified	_VQVKGSSRP_					0	0	0			REV__ENSG00000188177|ENST00000409871|ZC3H6	REV__ENSG00000188177|ENST00000409871|ZC3H6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27734375	2	479.277441	956.540328	-0.83762	-0.00040145	0.61161	0.00029313	-0.22601	-0.00010832	479.2776005246944	81.996	2.9164	82.141	80.297	83.214	0.14513					223	71	4	0	0	0	0.69624	1	7832	7832		40.778	1.972	1	2142700	+		63708	22986	42381	42399	72251	72251					0.060319920203255606
VQVKQPRKKV	10	Unmodified	_VQVKQPRKKV_					0	0	0		nc|ENSG00000171208|Q8NC67-2|NETO2;nc|ENSG00000171208|Q8NC67-3|NETO2;ENSG00000171208|ENST00000562435|NETO2	nc|ENSG00000171208|Q8NC67-2|NETO2	nc|ENSG00000171208|Q8NC67-2|NETO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.390380859375	2	605.393139	1208.77173	-1.3112	-0.00079378	-4.2469	-0.002571	-5.558	-0.0033648	605.3904490970708	44.982	0.96035	44.978	44.616	45.577	-0.0041618					50	21	3	0	0	0	0.8505	1	3538	3538		19.104	2.3861	1	285680			63709	6646	42382	42400	72252	72252					0.17569039722025082
VQVKVIFKCSA	11	Unmodified	_VQVKVIFKCSA_					0	0	0			REV__ENSG00000102359|ENST00000373004|SRPX2	REV__ENSG00000102359|ENST00000373004|SRPX2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3546142578125	2	611.354834	1220.69511	-0.25907	-0.00015838	2.238	0.0013682	1.9789	0.0012098	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.72106	1	9248	9248		28.081	1.0342	1	3360200	+		63710	17336	42383	42401	72253	72253					0.0935948011056098
VQVKVIFKCSA	11	Unmodified	_VQVKVIFKCSA_					0	0	0			REV__ENSG00000102359|ENST00000373004|SRPX2	REV__ENSG00000102359|ENST00000373004|SRPX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3553466796875	2	611.354834	1220.69511	0.21559	0.0001318	1.6628	0.0010166	1.8784	0.0011484	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.74763	1	9775	9775		22.58	0	1	5379900	+		63711	17336	42383	42401	72254	72254					0.0935948011056098
VQVKVIFKCSA	11	Unmodified	_VQVKVIFKCSA_					0	0	0			REV__ENSG00000102359|ENST00000373004|SRPX2	REV__ENSG00000102359|ENST00000373004|SRPX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.35400390625	2	611.354834	1220.69511	1.1383	0.00069592	0.67847	0.00041479	1.8168	0.0011107	611.3551104284419	93.917	2.9064	94.146	92.199	95.105	0.22863					262	69	4	0	0	0	0.7144	2	9421	9421;9433		29.17	4.0441	1	7316900	+		63712	17336	42383	42401	72255;72256	72255					0.0935948011056098
VQVKVIFKCSA	11	Unmodified	_VQVKVIFKCSA_					0	0	0			REV__ENSG00000102359|ENST00000373004|SRPX2	REV__ENSG00000102359|ENST00000373004|SRPX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	611.3555297851562	2	611.354834	1220.69511	1.142	0.00069816	1.5785	0.00096504	2.7205	0.0016632	611.3559139195816	95.881	6.4389	96.112	95.026	101.46	0.23103					416	152	6	0	0	0	0.7144	1	9838	9838		29.17	3.596	1	17478000	+		63713	17336	42383	42401	72257	72257					0.0935948011056098
VQVKVIFKCSA	11	Unmodified	_VQVKVIFKCSA_					0	0	0			REV__ENSG00000102359|ENST00000373004|SRPX2	REV__ENSG00000102359|ENST00000373004|SRPX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3551635742188	2	611.354834	1220.69511	0.85003	0.00051967	1.0308	0.00063016	1.8808	0.0011498	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.7144	1	9471	9471		29.17	1.0886	1	6836400	+		63714	17336	42383	42401	72258	72258					0.0935948011056098
VQVKVIFKCSA	11	Unmodified	_VQVKVIFKCSA_					0	0	0			REV__ENSG00000102359|ENST00000373004|SRPX2	REV__ENSG00000102359|ENST00000373004|SRPX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3549194335938	2	611.354834	1220.69511	-1.2523	-0.00076561	3.1276	0.0019121	1.8753	0.0011465	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.72739	1	9425	9425		27.047	1.4733	1	5978100	+		63715	17336	42383	42401	72259	72259					0.0935948011056098
VQVKVIFKCSA	11	Unmodified	_VQVKVIFKCSA_					0	0	0			REV__ENSG00000102359|ENST00000373004|SRPX2	REV__ENSG00000102359|ENST00000373004|SRPX2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.35400390625	2	611.354834	1220.69511	-1.2523	-0.00076562	3.9822	0.0024345	2.7298	0.0016689	611.3574050335559	95.939	5.9764	96.142	95.15	101.13	0.20242					381	139	6	0	0	0	0.68532	1	9682	9682		33.922	3.6039	1	16503000	+		63716	17336	42383	42401	72260	72260					0.0935948011056098
VQVKYLSRVF	10	Unmodified	_VQVKYLSRVF_					0	0	0			REV__ENSG00000113212|ENST00000231137|PCDHB7	REV__ENSG00000113212|ENST00000231137|PCDHB7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8692016601562	2	619.866423	1237.71829	2.311	0.0014325	2.5285	0.0015673	4.8395	0.0029999	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.8608	1	10236	10236		34.173	3.6689	1	4854700	+		63717	17983	42384	42402	72261	72261					0.10894242219501393
VQVKYLSRVF	10	Unmodified	_VQVKYLSRVF_					0	0	0			REV__ENSG00000113212|ENST00000231137|PCDHB7	REV__ENSG00000113212|ENST00000231137|PCDHB7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8697509765625	2	619.866423	1237.71829	1.2689	0.00078657	3.6102	0.0022379	4.8792	0.0030244	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.80179	1	9904	9904		39.253	4.1008	1	6493200	+		63718	17983	42384	42402	72262	72262					0.10894242219501393
VQVMEILGL	9	Unmodified	_VQVMEILGL_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2902526855469	2	501.288628	1000.5627	-0.50775	-0.00025453	3.985	0.0019976	3.4772	0.0017431	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.71772	1	8176	8176		39.253	3.6345	1	3014100	+		63719	25825	42385	42403	72263	72263					0.06244455373735036
VQVMEILGL	9	Unmodified	_VQVMEILGL_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2901611328125	2	501.288628	1000.5627	0.65623	0.00032896	2.7707	0.0013889	3.4269	0.0017179	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.78983	1	8247	8247		27.882	0	1	2931000	+		63720	25825	42385	42403	72264	72264					0.06244455373735036
VQVMEILGL	9	Unmodified	_VQVMEILGL_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2903747558594	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.67345	2	8569	8569;8593		42.396	11.892	1	9566900	+		63721	25825	42385	42403	72265;72266	72265					0.06244455373735036
VQVMEILGL	9	Unmodified	_VQVMEILGL_					0	0	0			REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2898864746094	2	501.288628	1000.5627	-0.28392	-0.00014233	3.869	0.0019395	3.5851	0.0017972	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.69624	1	10087	10087		40.778	3.6191	1	9038000	+		63722	25825	42385	42403	72267	72267					0.06244455373735036
VQVPAAAFLGS	11	Unmodified	_VQVPAAAFLGS_					0	0	0		ENSG00000134508|ENST00000256925|CABLES1	ENSG00000134508|ENST00000256925|CABLES1	ENSG00000134508|ENST00000256925|CABLES1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2930908203125	2	530.295299	1058.57605	-0.034361	-1.8221E-05	-3.4792	-0.001845	-3.5136	-0.0018632	530.2933487958371	90.549	3.8964	90.619	89.601	93.498	0.069328					306	92	5	0	0	0	0.61369	1	9451	9451		42.864	1.4377	1	1852900			63723	3938	42386	42404	72268	72268					0.04910029477309763
VQVPLMLN	8	Unmodified	_VQVPLMLN_					0	0	0		ENSG00000152049|ENST00000281830|KCNE4;nc|ENSG00000152049|Q8WWG9|KCNE4	ENSG00000152049|ENST00000281830|KCNE4	ENSG00000152049|ENST00000281830|KCNE4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2635498046875	2	457.262413	912.510274	0.52869	0.00024175	3.5661	0.0016306	4.0948	0.0018724	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.90465	1	8658	8658		40.573	3.4135	1	4885100			63724	5153	42387	42405	72269	72269					0.05051917030766617
VQVPPRFVNKV	11	Unmodified	_VQVPPRFVNKV_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8822631835938	2	641.885147	1281.75574	-0.050098	-3.2157E-05	-4.1031	-0.0026337	-4.1532	-0.0026659	641.8823801669184	97.811	4.0901	97.868	96.902	100.99	0.056839					322	94	5	0	0	0	0.58425	5	10300	10300;10324;10348;10360;10395		45.972	17.891	1	3644700			63725	15003;5274	42388	42406	72270;72271;72272;72273;72274	72270					0.1261333348509197
VQVPPRFVNKV	11	Unmodified	_VQVPPRFVNKV_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8823852539062	2	641.885147	1281.75574	-1.1529	-0.00074004	-3.1	-0.0019899	-4.2529	-0.0027299	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.69995	1	10178	10178		31.53	1.2121	1	3521600			63726	15003;5274	42388	42406	72275	72275					0.1261333348509197
VQVPVPVCV	9	Unmodified	_VQVPVPVCV_					0	0	0			REV__ENST00000590548.5_1_19:11597897-11616622:-|nuORF	REV__ENST00000590548.5_1_19:11597897-11616622:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	470.2718200683594	2	470.270238	938.525924	-0.1113	-5.2342E-05	4.1882	0.0019696	4.0769	0.0019172	470.27219532048343	92.361	2.6069	92.431	91.273	93.88	0.06987					140	61	4	0	0	0	0.39977	2	9588	9516;9588		57.811	24.318	1	1898400	+		63727	20784	42389	42407	72276;72277	72277					0.05420203547816982
VQVPVPVCV	9	Unmodified	_VQVPVPVCV_					0	0	0			REV__ENST00000590548.5_1_19:11597897-11616622:-|nuORF	REV__ENST00000590548.5_1_19:11597897-11616622:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.26824951171875	2	470.270238	938.525924	1.0926	0.00051384	2.964	0.0013939	4.0567	0.0019077	470.27159576530556	91.919	2.3675	92.368	91.756	94.123	0.44959					104	55	3	0	0	0	0.77546	1	10904	10904		31.955	5.1588	1	778610	+		63728	20784	42389	42407	72278	72278					0.05420203547816982
VQVPVPVCV	9	Unmodified	_VQVPVPVCV_					0	0	0			REV__ENST00000590548.5_1_19:11597897-11616622:-|nuORF	REV__ENST00000590548.5_1_19:11597897-11616622:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	470.270238	938.525924	-0.1113	-5.2342E-05	4.1882	0.0019696	4.0769	0.0019172	470.27219532048343	92.361	2.6069	92.431	91.273	93.88	0.06987	0.074622	-0.00011852	NaN	57.811	140	61	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1898400	+		63729	20784	42389	42407							0.05420203547816982
VQVRLTEIY	9	Unmodified	_VQVRLTEIY_					0	0	0			REV__ENST00000562622.5_1_16:58149118-58163019:-|nuORF	REV__ENST00000562622.5_1_16:58149118-58163019:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.8199462890625	2	560.821681	1119.62881	0.78776	0.00044179	-4.1287	-0.0023155	-3.341	-0.0018737	560.8192753742564	92.439	2.8901	92.598	91.192	94.082	0.15874					209	68	4	0	0	0	0.77244	1	9370	9370		32.812	2.4947	1	872010	+		63730	28804	42390	42408	72279	72279					0.07377987540121467
VQVSPPASVPR	11	Unmodified	_VQVSPPASVPR_					0	0	0		ENST00000302432.3_1_12:120883914-120884145:-|nuORF	ENST00000302432.3_1_12:120883914-120884145:-|nuORF	ENST00000302432.3_1_12:120883914-120884145:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	568.8531494140625	2	568.824755	1135.63496	-1.3909	-0.00079118	3.1607	0.0017979	1.7698	0.0010067	568.8266763069756	102.28	0.67589	102.42	101.97	102.65	0.1357					35	16	3	0	0	0	0.15019	1	10688	10688		72.243	12.125	1	416680			63731	9819	42391	42409	72280	72280					0.07256505771647426
VQVSTPWH	8	Unmodified	_VQVSTPWH_					0	0	0		ENST00000462664.4_1_6:27218995-27219885:+|nuORF	ENST00000462664.4_1_6:27218995-27219885:+|nuORF	ENST00000462664.4_1_6:27218995-27219885:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	477.2470397949219	2	477.245609	952.476666	0.48847	0.00023312	1.5905	0.00075904	2.0789	0.00099216	477.24619345386253	68.431	1.3932	68.559	67.916	69.309	0.12839					120	53	3	0	0	0	0.89457	1	6126	6126		37.028	3.5129	1	594020			63732	12046	42392	42410	72281	72281					-0.0014736841677631674
VQVTATLRN	9	Unmodified	_VQVTATLRN_					0	0	0		nc|ENSG00000118690|Q8NEN0-2|ARMC2;ENSG00000118690|ENST00000392644|ARMC2	nc|ENSG00000118690|Q8NEN0-2|ARMC2	nc|ENSG00000118690|Q8NEN0-2|ARMC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2904357910156	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.7932	1	8632	8632		26.693	0	1	2850500			63733	3041	42393	42411	72282	72282					0.06628261191792717
VQVTTIGPE	9	Unmodified	_VQVTTIGPE_					0	0	0			REV__nc|ENSG00000139364|Q14DG7-3|TMEM132B	REV__nc|ENSG00000139364|Q14DG7-3|TMEM132B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2876281738281	2	472.258382	942.502212	2.0296	0.00095849	-1.8517	-0.00087449	0.17788	8.4004E-05	472.25737233811014	95.53	0.49972	95.473	95.306	95.806	-0.057526					22	11	3	0	0	0	0.20789	1	10240	10240		19.104	0	1	237390	+		63734	19537	42394	42412	72283	72283					0.028660613150123027
VQVTVIDTFGL	11	Unmodified	_VQVTVIDTFGL_					0	0	0			REV__ENST00000498666.5_1_21:46306285-46312915:-|nuORF	REV__ENST00000498666.5_1_21:46306285-46312915:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.3328247070312	2	596.334621	1190.65469	1.5761	0.00093988	-4.3663	-0.0026038	-2.7902	-0.0016639	596.3318720869813	95.913	2.9437	96.333	95.271	98.215	0.4205					211	71	4	0	0	0	0.60058	1	11569	11569		44.377	9.2252	1	1079900	+		63735	20708	42395	42413	72284	72284					0.06698836991768076
VQWHEDSSSD	10	Unmodified	_VQWHEDSSSD_					0	0	0		chr3:47714490-47718022|20|19.1|0.61|4.96|-|0|TE_info:AluJr,AluJr_dup14161,Alu,SINE,donor,+,47718022,47718162|SMARCC1,None|1	chr3:47714490-47718022|20|19.1|0.61|4.96|-|0|TE_info:AluJr,AluJr_dup14161,Alu,SINE,donor,+,47718022,47718162|SMARCC1,None|1	chr3:47714490-47718022|20|19.1|0.61|4.96|-|0|TE_info:AluJr,AluJr_dup14161,Alu,SINE,donor,+,47718022,47718162|SMARCC1,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	595.2423706054688	2	595.241449	1188.46835	-2.1287	-0.0012671	3.332	0.0019834	1.2033	0.00071628	595.2433353733521	64.602	0.67223	64.629	64.346	65.018	0.027138					41	17	3	0	0	0	0.70553	1	6089	6089		44.377	3.599	1	345500			63736	404	42396	42414	72285	72285					-0.11835011914718052
VQYFLLHIEKV	11	Unmodified	_VQYFLLHIEKV_					0	0	0			REV__ENST00000437100.5_1_20:34243158-34252704:-|nuORF	REV__ENST00000437100.5_1_20:34243158-34252704:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.8008728027344	3	463.602734	1387.78637	-2.4094	-0.001117	-0.30393	-0.0001409	-2.7134	-0.0012579	463.93707876760124	41.822	0.1886	42.236	42.086	42.274	0.4139					6	4	2	0	0	0	0.17437	1	3676	3676		25.892	3.3301	1	146170	+		63737	25345	42397	42415	72286	72286					0.10799067079528868
VQYGVSLLH	9	Unmodified	_VQYGVSLLH_					0	0	0			REV__ENST00000588723.5_1_19:37606065-37660830:-|nuORF	REV__ENST00000588723.5_1_19:37606065-37660830:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.2796936035156	2	508.282192	1014.54983	0.029362	1.4924E-05	-4.2974	-0.0021843	-4.268	-0.0021694	508.2799882081312	26.317	1.2518	26.059	25.682	26.934	-0.2572					83	27	5	0	0	0	0.41566	1	1450	1450		56.721	1.2168	1	2089700	+		63738	23185	42398	42416	72287	72287					0.04313760305853975
VRAAFALGGL	10	Unmodified	_VRAAFALGGL_					0	0	0		ENSG00000084774|ENST00000264705|CAD	ENSG00000084774|ENST00000264705|CAD	ENSG00000084774|ENST00000264705|CAD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7908630371094	2	487.792727	973.5709	-1.4694	-0.00071678	-3.0475	-0.0014866	-4.5169	-0.0022033	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.86718	1	8312	8312		27.882	3.3782	1	607090			63739	1526	42399	42417	72288	72288					0.08305770405377189
VRAAFIHVI	9	Unmodified	_VRAAFIHVI_					0	0	0		nc|ENSG00000158014|Q9BRI3-1|SLC30A2;ENSG00000158014|ENST00000374276|SLC30A2	nc|ENSG00000158014|Q9BRI3-1|SLC30A2	nc|ENSG00000158014|Q9BRI3-1|SLC30A2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	512.7739868164062	2	513.316369	1024.61818	-0.33149	-0.00017016	-0.47267	-0.00024263	-0.80416	-0.00041279	513.3157241752641	44.435	0.89209	44.89	44.654	45.546	0.45439					34	21	2	0	0	0	0.20789	1	4067	4067		42.474	26.833	1	409720			63740	5457	42400	42418	72289	72289					0.10686049676360199
VRAAFIHVI	9	Unmodified	_VRAAFIHVI_					0	0	0		nc|ENSG00000158014|Q9BRI3-1|SLC30A2;ENSG00000158014|ENST00000374276|SLC30A2	nc|ENSG00000158014|Q9BRI3-1|SLC30A2	nc|ENSG00000158014|Q9BRI3-1|SLC30A2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	513.316369	1024.61818	-0.87997	-0.0004517	0.64747	0.00033236	-0.2325	-0.00011934	513.3161430707722	44.264	0.76287	45.108	44.862	45.625	0.84438	0.10944	0.00060338	NaN	50.025	33	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	438950			63741	5457	42400	42418							0.10686049676360199
VRAALLLAVQR	11	Unmodified	_VRAALLLAVQR_					0	0	0			REV__ENSG00000173825|ENST00000309880|TIGD3	REV__ENSG00000173825|ENST00000309880|TIGD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2644958496094	3	403.931185	1208.77173	-1.7749	-0.00071695	-2.0382	-0.0008233	-3.8132	-0.0015403	403.9302472755502	47.133	5.2406	47.133	45.815	51.056	0					395	145	4	0	0	0	0.80593	1	3657	3657		10.104	0.45776	1	2526100	+		63742	21954	42401	42419	72290	72290					0.17569039722025082
VRAAPPVRGR	10	Unmodified	_VRAAPPVRGR_					0	0	0		ENST00000371834.6_3_9:136918617-136933635:-|nuORF	ENST00000371834.6_3_9:136918617-136933635:-|nuORF	ENST00000371834.6_3_9:136918617-136933635:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.8324584960938	2	539.833249	1077.65194	1.2464	0.00067287	-2.702	-0.0014586	-1.4555	-0.00078575	539.8316497324216	94.945	1.777	94.991	94.576	96.353	0.046173					111	41	4	0	0	0	0.8651	1	10033	10033		25.574	3.6142	1	1475500			63743	10679	42402	42420	72291	72291					0.1162247116810704
VRAAPPVRGR	10	Unmodified	_VRAAPPVRGR_					0	0	0		ENST00000371834.6_3_9:136918617-136933635:-|nuORF	ENST00000371834.6_3_9:136918617-136933635:-|nuORF	ENST00000371834.6_3_9:136918617-136933635:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.8323974609375	2	539.833249	1077.65194	0.78948	0.00042619	-2.3818	-0.0012858	-1.5923	-0.0008596	539.8318474619688	94.896	1.5304	95.059	94.575	96.105	0.16308					86	36	3	0	0	0	0.8545	1	9719	9719		36.447	9.6506	1	945910			63744	10679	42402	42420	72292	72292					0.1162247116810704
VRAAQLTISS	10	Unmodified	_VRAAQLTISS_					0	0	0			REV__nc|ENSG00000065534|Q15746-4|MYLK	REV__nc|ENSG00000065534|Q15746-4|MYLK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.30322265625	2	523.303655	1044.59276	0.69703	0.00036476	-1.0638	-0.00055667	-0.36673	-0.00019191	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.8651	1	8418	8418		25.574	2.5316	1	3801600	+		63745	16504	42403	42421	72293	72293					0.07224530363282611
VRAAWPVPV	9	Unmodified	_VRAAWPVPV_					0	0	0		ENST00000280780.6_2_10:126432740-126432824:-|nuORF	ENST00000280780.6_2_10:126432740-126432824:-|nuORF	ENST00000280780.6_2_10:126432740-126432824:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.7952575683594	2	497.795269	993.575986	0.33469	0.00016661	1.0393	0.00051735	1.374	0.00068396	497.79551634358694	49.085	0.97178	49.123	48.706	49.678	0.037735					52	22	3	0	0	0	0.7932	1	3763	3763		25.45	3.7478	1	383630			63746	9623	42404	42422	72294	72294					0.07894074267983342
VRACLLAGPL	10	Unmodified	_VRACLLAGPL_					0	0	0			REV__ENST00000417846.2_1_6:116432031-116439170:+|nuORF	REV__ENST00000417846.2_1_6:116432031-116439170:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.80145263671875	2	506.802237	1011.58992	0.2762	0.00013998	-2.9987	-0.0015198	-2.7225	-0.0013798	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.81018	1	3316	3316		38.806	0.99462	1	416790	+		63747	22279	42405	42423	72295	72295					0.08458983704770162
VRACVGPGGL	10	Unmodified	_VRACVGPGGL_					0	0	0		chr2:10437092-10441509|20|19.4|0.41|5.56|-|0|None,ODC1|1	chr2:10437092-10441509|20|19.4|0.41|5.56|-|0|None,ODC1|1	chr2:10437092-10441509|20|19.4|0.41|5.56|-|0|None,ODC1|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.2528991699219	2	464.755287	927.496021	0.58494	0.00027186	-0.14087	-6.547E-05	0.44407	0.00020639	464.75523367447823	80.502	0.96809	80.643	80.065	81.033	0.14117					47	32	2	0	0	0	0.37624	1	7660	7660		29.15	25.465	1	169440			63748	303	42406	42424	72296	72296					0.029372646024967253
VRADAPLRRP	10	Unmodified	_VRADAPLRRP_					0	0	0			REV__ENST00000456318.5_2_3:184079522-184080848:+|nuORF	REV__ENST00000456318.5_2_3:184079522-184080848:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8430786132812	2	575.843813	1149.67307	0.61103	0.00035186	-2.2107	-0.001273	-1.5997	-0.00092115	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.86763	1	9262	9262		26.693	0	1	6623700	+		63749	26953	42407	42425	72297	72297					0.10422436476960684
VRADQQPGP	9	Unmodified	_VRADQQPGP_					0	0	0			REV__ENST00000506672.5_1_5:177302663-177310828:+|nuORF	REV__ENST00000506672.5_1_5:177302663-177310828:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.2361145019531	2	484.251423	966.488293	-1.0442	-0.00050565	-4.0112	-0.0019424	-5.0554	-0.0024481	484.24989750098064	86.704	0.53116	87.158	87.019	87.55	0.4543					16	12	2	0	0	0	0.20789	1	10247	10247		54.776	8.8041	1	87978	+		63750	27895	42408	42426	72298	72298					0.003708286065716493
VRAELWLD	8	Unmodified	_VRAELWLD_					0	0	0		nc|ENSG00000105122|Q86YV0-2|RASAL3;ENSG00000105122|ENST00000343625|RASAL3	nc|ENSG00000105122|Q86YV0-2|RASAL3	nc|ENSG00000105122|Q86YV0-2|RASAL3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2901306152344	2	501.274367	1000.53418	-0.54636	-0.00027387	0.11288	5.6582E-05	-0.43348	-0.00021729	501.27612289786435	84.175	0.43517	84.234	83.893	84.328	0.05925					11	9	2	0	0	0	0.4196	1	8455	8455		40.573	18.613	1	31424			63751	2185	42409	42427	72299	72299					0.033934737887989286
VRAFYVNVLN	10	Unmodified	_VRAFYVNVLN_					0	0	0		ENSG00000121691|ENST00000241052|CAT;ENST00000525707.1_1_11:34482779-34490041:+|nuORF	ENSG00000121691|ENST00000241052|CAT	ENSG00000121691|ENST00000241052|CAT	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.85595703125	2	597.835123	1193.65569	-0.56334	-0.00033678	2.6826	0.0016038	2.1193	0.001267	597.8359544799774	94.752	0.38372	94.82	94.714	95.098	0.068336					11	8	2	0	0	0	0.37624	1	9892	9892		42.396	5.9494	1	39061			63752	3194	42410	42428	72300	72300					0.06661096151333368
VRAGAQPAN	9	Unmodified	_VRAGAQPAN_					0	0	0			REV__ENST00000394169.5_1_17:38081462-38082082:-|nuORF	REV__ENST00000394169.5_1_17:38081462-38082082:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2407531738281	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.76764	1	8012	8012		34.173	6.2903	1	1068200	+		63753	26076	42411	42429	72301	72301					0.021228632976999506
VRAGAQPAN	9	Unmodified	_VRAGAQPAN_					0	0	0			REV__ENST00000394169.5_1_17:38081462-38082082:-|nuORF	REV__ENST00000394169.5_1_17:38081462-38082082:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.24176025390625	2	442.240858	882.467164	-1.4875	-0.00065783	1.6878	0.00074643	0.20036	8.8607E-05	442.24148848241214	79.629	2.7036	79.728	77.569	80.272	0.098701					195	94	3	0	0	0	0.76255	1	7395	7395		35.618	2.1027	1	257300	+		63754	26076	42411	42429	72302	72302					0.021228632976999506
VRAGAQPAN	9	Unmodified	_VRAGAQPAN_					0	0	0			REV__ENST00000394169.5_1_17:38081462-38082082:-|nuORF	REV__ENST00000394169.5_1_17:38081462-38082082:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2408142089844	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.67345	1	7848	7848		42.396	5.237	1	968500	+		63755	26076	42411	42429	72303	72303					0.021228632976999506
VRAGAQPAN	9	Unmodified	_VRAGAQPAN_					0	0	0			REV__ENST00000394169.5_1_17:38081462-38082082:-|nuORF	REV__ENST00000394169.5_1_17:38081462-38082082:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	442.240858	882.467164	-0.47904	-0.00021185	0.61328	0.00027122	0.13424	5.9365E-05	442.24100511647663	79.149	1.9742	79.56	78.188	80.162	0.4106	-0.084033	-0.00082768	NaN	35.618	81	46	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	237890	+		63756	26076	42411	42429							0.021228632976999506
VRAGARGII	9	Unmodified	_VRAGARGII_					0	0	0		ENST00000498008.5_1_1:46809037-46809295:+|nuORF	ENST00000498008.5_1_1:46809037-46809295:+|nuORF	ENST00000498008.5_1_1:46809037-46809295:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7900390625	2	456.790518	911.566484	0.25783	0.00011777	4.1861	0.0019121	4.4439	0.0020299	456.79223981105497	41.505	1.1583	41.474	40.833	41.991	-0.030987					78	30	4	0	0	0	0.72402	1	3051	3051		38.806	1.647	1	325120			63757	12817	42412	42430	72304	72304					0.1071630598247566
VRAGFGRL	8	Unmodified	_VRAGFGRL_					0	0	0			REV__nc|ENSG00000101444|P23526-2|AHCY	REV__nc|ENSG00000101444|P23526-2|AHCY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2630615234375	2	438.264136	874.51372	-1.2747	-0.00055866	-2.1943	-0.00096169	-3.469	-0.0015203	438.26333404960053	40.756	5.5802	41.345	40.721	46.301	0.58915					349	143	5	0	0	0	0.884	1	3818	3818		33.516	1.5607	1	219150000	+		63758	17280	42413	42431	72305	72305					0.07144347919643224
VRAGPEALPGG	11	Unmodified	_VRAGPEALPGG_					0	0	0			REV__ENST00000603475.1_1_9:90586022-90589145:-|nuORF	REV__ENST00000603475.1_1_9:90586022-90589145:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2817993164062	2	512.282723	1022.55089	-1.5312	-0.00078441	-1.1667	-0.00059769	-2.6979	-0.0013821	512.2820384248688	86.195	3.9563	86.353	85.285	89.241	0.15851					164	92	2	0	0	0	0.61369	1	8502	8502		42.864	10.909	1	356130	+		63759	29345	42414	42432	72306	72306					0.0405197467475773
VRAGPVRN	8	Unmodified	_VRAGPVRN_					0	0	0		ENST00000360642.7_1_4:170541712-170541889:+|nuORF;ENST00000512813.5_1_4:170541712-170557134:+|nuORF	ENST00000360642.7_1_4:170541712-170541889:+|nuORF	ENST00000360642.7_1_4:170541712-170541889:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	434.76019287109375	2	434.759218	867.503883	2.1234	0.00092316	-2.3923	-0.0010401	-0.26887	-0.00011689	434.758413846185	87.485	3.2565	87.538	86.101	89.357	0.053024					140	76	4	0	0	0	0.884	1	9015	9015		33.516	1.5607	1	1543500			63760	10453	42415	42433	72307	72307					0.06483159914273529
VRAGPVRN	8	Unmodified	_VRAGPVRN_					0	0	0		ENST00000360642.7_1_4:170541712-170541889:+|nuORF;ENST00000512813.5_1_4:170541712-170557134:+|nuORF	ENST00000360642.7_1_4:170541712-170541889:+|nuORF	ENST00000360642.7_1_4:170541712-170541889:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	434.76025390625	2	434.759218	867.503883	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.271	1	87.472	86.972	87.972	0.20114								0	0	0	0.29452	1	8612	8612		33.516	5.2613	1				63761	10453	42415	42433	72308	72308					0.06483159914273529
VRAGTAAGPL	10	Unmodified	_VRAGTAAGPL_					0	0	0		chr12:119125479-119130678|15|17.93|0.53|5.07|+|2|SRRM4,SRRM4|1	chr12:119125479-119130678|15|17.93|0.53|5.07|+|2|SRRM4,SRRM4|1	chr12:119125479-119130678|15|17.93|0.53|5.07|+|2|SRRM4,SRRM4|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7915954589844	2	456.766709	911.518865	-0.11783	-5.3821E-05	-0.0035488	-1.621E-06	-0.12138	-5.5442E-05	456.76663982596483	36.306	1.0278	36.588	36.229	37.257	0.28173					43	24	3	0	0	0	0.37624	1	2830	2830		54.776	5.3348	1	288940			63762	113	42416	42434	72309	72309					0.05956606991605895
VRAHRARRR	9	Unmodified	_VRAHRARRR_					0	0	0		ENST00000296564.8_2_5:5422997-5436538:+|nuORF	ENST00000296564.8_2_5:5422997-5436538:+|nuORF	ENST00000296564.8_2_5:5422997-5436538:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3425903320312	2	589.366113	1176.71767	0.8128	0.00047903	1.4411	0.00084934	2.2539	0.0013284	589.3671464235562	92.316	0.42543	92.475	92.198	92.624	0.15875					14	9	2	0	0	0	0.20789	1	9320	9320		27.882	7.8855	1	86136			63763	9741	42417	42435	72310	72310					0.13638305133667927
VRAHTKAS	8	Unmodified	_VRAHTKAS_					0	0	0			REV__ENSG00000197136|ENST00000355703|PCNX3	REV__ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2518615722656	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87064	2	7287	7243;7287		37.159	8.0096	1	1788100	+		63764	23201	42418	42436	72311;72312	72312					0.048394536773685104
VRAHTKAS	8	Unmodified	_VRAHTKAS_					0	0	0			REV__ENSG00000197136|ENST00000355703|PCNX3	REV__ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25146484375	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.87064	1	8172	8172		29.15	3.6994	1	3292300	+		63765	23201	42418	42436	72313	72313					0.048394536773685104
VRAHTKAS	8	Unmodified	_VRAHTKAS_					0	0	0			REV__ENSG00000197136|ENST00000355703|PCNX3	REV__ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25152587890625	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.87064	4	7872	7837;7872;7929;8013		31.955	6.5047	1	3370400	+		63766	23201	42418	42436	72314;72315;72316;72317	72315					0.048394536773685104
VRAHTKAS	8	Unmodified	_VRAHTKAS_					0	0	0			REV__ENSG00000197136|ENST00000355703|PCNX3	REV__ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.2513427734375	2	435.251226	868.487899	-1.5606	-0.00067925	1.7832	0.00077614	0.22261	9.6893E-05	435.25188204569275	79.944	10.541	80.077	75.575	86.115	0.13303					643	306	4	0	0	0	0.87479	1	7527	7527		30.504	3.8107	1	3322700	+		63767	23201	42418	42436	72318	72318					0.048394536773685104
VRAHTKAS	8	Unmodified	_VRAHTKAS_					0	0	0			REV__ENSG00000197136|ENST00000355703|PCNX3	REV__ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2512512207031	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.87922	1	7526	7526		31.955	1.4512	1	2743300	+		63768	23201	42418	42436	72319	72319					0.048394536773685104
VRAHTKAS	8	Unmodified	_VRAHTKAS_					0	0	0			REV__ENSG00000197136|ENST00000355703|PCNX3	REV__ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2514343261719	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.85277	2	7452	7452;7697		30.504	0.6621	1	2494100	+		63769	23201	42418	42436	72320;72321	72320					0.048394536773685104
VRAHTKAS	8	Unmodified	_VRAHTKAS_					0	0	0			REV__ENSG00000197136|ENST00000355703|PCNX3	REV__ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2518005371094	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.86677	3	9003	9003;9231;9255		37.159	11.709	1	2020200	+		63770	23201	42418	42436	72322;72323;72324	72322					0.048394536773685104
VRAHTKAS	8	Unmodified	_VRAHTKAS_					0	0	0			REV__ENSG00000197136|ENST00000355703|PCNX3	REV__ENSG00000197136|ENST00000355703|PCNX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25164794921875	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.8347	3	9011	9011;9191;9275		29.15	2.5607	1	2235800	+		63771	23201	42418	42436	72325;72326;72327	72325					0.048394536773685104
VRAKATTHK	9	Unmodified	_VRAKATTHK_					0	0	0			REV__ENST00000264245.8_2_3:119084181-119087311:+|nuORF	REV__ENST00000264245.8_2_3:119084181-119087311:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.3083801269531	2	506.306532	1010.59851	0.26704	0.0001352	3.7417	0.0018945	4.0087	0.0020297	506.30835501628917	44.614	1.9662	44.591	43.729	45.696	-0.023079					64	45	2	0	0	0	0.44421	1	3445	3445		54.776	3.4409	1	414870	+		63772	24467	42419	42437	72328	72328					0.09363673665586703
VRAKATTHK	9	Unmodified	_VRAKATTHK_					0	0	0			REV__ENST00000264245.8_2_3:119084181-119087311:+|nuORF	REV__ENST00000264245.8_2_3:119084181-119087311:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.3095397949219	2	506.306532	1010.59851	0.34662	0.0001755	4.2773	0.0021656	4.6239	0.0023411	506.81007684679236	49.469	1.8985	49.512	48.558	50.457	0.04224					78	46	2	0	0	0	0.7932	2	3799	3799;3869		23.523	3.5259	1	315680	+		63773	24467	42419	42437	72329;72330	72329					0.09363673665586703
VRAKATTHK	9	Unmodified	_VRAKATTHK_					0	0	0			REV__ENST00000264245.8_2_3:119084181-119087311:+|nuORF	REV__ENST00000264245.8_2_3:119084181-119087311:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3082275390625	2	506.306532	1010.59851	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.361	1	43.311	42.811	43.811	-0.050308								0	0	0	0.29475	1	2980	2980		32.812	3.6629	1		+		63774	24467	42419	42437	72331	72331					0.09363673665586703
VRAKATTHK	9	Unmodified	_VRAKATTHK_					0	0	0			REV__ENST00000264245.8_2_3:119084181-119087311:+|nuORF	REV__ENST00000264245.8_2_3:119084181-119087311:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3086242675781	2	506.306532	1010.59851	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.176	1	44.117	43.617	44.617	-0.058262								0	0	0	0.29134	1	3094	3094		34.173	6.2903	1		+		63775	24467	42419	42437	72332	72332					0.09363673665586703
VRAKDSITSL	10	Unmodified	_VRAKDSITSL_					0	0	0		ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.3167114257812	2	545.316763	1088.61897	1.1684	0.00063715	-1.2999	-0.00070886	-0.1315	-7.1708E-05	545.3159097100256	88.434	2.9236	88.484	86.561	89.485	0.050407					231	68	4	0	0	0	0.86698	1	9186	9186		28.081	0	1	4705800			63776	3456	42420	42438	72333	72333					0.07820799534761136
VRAKDSITSL	10	Unmodified	_VRAKDSITSL_					0	0	0		ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	ENSG00000126467|ENST00000246801|TSKS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.316650390625	2	545.316763	1088.61897	-0.0069207	-3.774E-06	0.033442	1.8237E-05	0.026521	1.4463E-05	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.77314	1	10412	10412		40.778	1.5253	1	4868200			63777	3456	42420	42438	72334	72334					0.07820799534761136
VRAKFKFS	8	Unmodified	_VRAKFKFS_					0	0	0		ENSG00000121067|ENST00000504102|SPOP;ENSG00000144228|ENST00000280098|SPOPL	ENSG00000121067|ENST00000504102|SPOP	ENSG00000121067|ENST00000504102|SPOP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7960205078125	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.85277	1	4569	4569		25.45	6.0902	1	2075300			63778	3166	42421	42439	72335	72335					0.08446074267999393
VRAKKPIKR	9	Unmodified	_VRAKKPIKR_					0	0	0			REV__ENSG00000166455|ENST00000299578|C16orf46	REV__ENSG00000166455|ENST00000299578|C16orf46	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3739013671875	2	548.377292	1094.74003	-1.4498	-0.00079504	-4.1619	-0.0022823	-5.6117	-0.0030773	548.3748802153438	35.47	1.1138	35.47	34.867	35.98	0					77	29	3	0	0	0	0.7932	1	2027	2027		11.511	3.8207	1	301910	+		63779	21297	42422	42440	72336	72336					0.19645091758752642
VRAKKPIKR	9	Unmodified	_VRAKKPIKR_					0	0	0			REV__ENSG00000166455|ENST00000299578|C16orf46	REV__ENSG00000166455|ENST00000299578|C16orf46	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3743896484375	2	548.377292	1094.74003	-0.93575	-0.00051314	-4.429	-0.0024288	-5.3648	-0.0029419	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.7932	1	2516	2516		17.365	1.7232	1	651720	+		63780	21297	42422	42440	72337	72337					0.19645091758752642
VRAKPIPG	8	Unmodified	_VRAKPIPG_					0	0	0		ENSG00000152409|ENST00000396137|JMY;nc|ENSG00000152409|Q8N9B5-2|JMY	ENSG00000152409|ENST00000396137|JMY	ENSG00000152409|ENST00000396137|JMY	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	419.2693786621094	2	419.268887	836.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.179	1	48.179	47.679	48.679	0								0	0	0	0.29498	1	3724	3724		26.796	6.3143	1				63781	5173	42423	42441	72338	72338					0.09842116205174989
VRAKRSSKM	9	Unmodified	_VRAKRSSKM_					0	0	0		ENSG00000175445|ENST00000650287|LPL	ENSG00000175445|ENST00000650287|LPL	ENSG00000175445|ENST00000650287|LPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.816650390625	2	531.813667	1061.61278	1.595	0.00084823	4.4073	0.0023439	6.0023	0.0031921	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.76255	2	8963	8905;8963		35.618	5.1146	1	1345000			63782	7016	42424	42442	72339;72340	72340					0.08444002822261609
VRAKRSSKM	9	Unmodified	_VRAKRSSKM_					0	0	0		ENSG00000175445|ENST00000650287|LPL	ENSG00000175445|ENST00000650287|LPL	ENSG00000175445|ENST00000650287|LPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8169555664062	2	531.813667	1061.61278	1.8637	0.00099113	4.131	0.0021969	5.9947	0.003188	531.8157444108199	88.686	4.0119	88.613	87.337	91.349	-0.07238					352	95	5	0	0	0	0.78983	2	9217	9217;9241		27.882	1.0861	1	4423300			63783	7016	42424	42442	72341;72342	72341					0.08444002822261609
VRALGLDRR	9	Unmodified	_VRALGLDRR_					0	0	0			REV__ENST00000423084.1_1_7:76178841-76180825:+|nuORF	REV__ENST00000423084.1_1_7:76178841-76180825:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	528.3280639648438	2	528.325257	1054.63596	0.16574	8.7566E-05	4.462	0.0023574	4.6277	0.0024449	528.32736713568	38.345	1.4547	38.317	37.949	39.403	-0.027843					35	21	2	0	0	0	0.71772	1	2650	2650		39.253	2.8061	1	207530	+		63784	26103	42425	42443	72343	72343					0.11082764931234124
VRALKETLQRV	11	Unmodified	_VRALKETLQRV_					0	0	0			REV__ENSG00000176101|ENST00000322310|SSNA1	REV__ENSG00000176101|ENST00000322310|SSNA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.2727966308594	3	438.273499	1311.79867	-0.96199	-0.00042161	-0.26536	-0.0001163	-1.2273	-0.00053791	438.2732841967114	107.57	0.99143	107.57	106.84	107.83	0					91	23	5	0	0	0	0.75121	1	11186	11186		21.78	0	1	3871200	+		63785	22108	42426	42444	72344	72344					0.15524103542543344
VRALKETLQRV	11	Unmodified	_VRALKETLQRV_					0	0	0			REV__ENSG00000176101|ENST00000322310|SSNA1	REV__ENSG00000176101|ENST00000322310|SSNA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2729797363281	3	438.273499	1311.79867	2.7278	0.0011955	-3.8738	-0.0016978	-1.146	-0.00050227	438.2717172692411	106.49	1.037	106.46	105.98	107.01	-0.034134					77	23	5	0	0	0	0.72892	1	11798	11798		26.75	3.3718	1	3866800	+		63786	22108	42426	42444	72345	72345					0.15524103542543344
VRALKETLQRV	11	Unmodified	_VRALKETLQRV_					0	0	0			REV__ENSG00000176101|ENST00000322310|SSNA1	REV__ENSG00000176101|ENST00000322310|SSNA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.2730407714844	3	438.273499	1311.79867	2.0595	0.00090261	-3.3503	-0.0014684	-1.2909	-0.00056576	438.2719380139852	107.11	1.2259	107.15	106.67	107.9	0.035614					128	28	5	0	0	0	0.69687	2	11750	11750;11821		32.034	7.8023	1	4659700	+		63787	22108	42426	42444	72346;72347	72346					0.15524103542543344
VRALKETLQRV	11	Unmodified	_VRALKETLQRV_					0	0	0			REV__ENSG00000176101|ENST00000322310|SSNA1	REV__ENSG00000176101|ENST00000322310|SSNA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.27294921875	3	438.273499	1311.79867	0.73902	0.00032389	-1.8768	-0.00082255	-1.1378	-0.00049865	438.27258626082147	106.07	0.86208	106.16	105.83	106.7	0.099007					90	20	5	0	0	0	0.69071	1	11347	11347		33.039	1.0053	1	9065500	+		63788	22108	42426	42444	72348	72348					0.15524103542543344
VRALLLLLLL	10	Unmodified	_VRALLLLLLL_					0	0	0		ENSG00000172071|ENST00000303236|EIF2AK3	ENSG00000172071|ENST00000303236|EIF2AK3	ENSG00000172071|ENST00000303236|EIF2AK3	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8963623046875	2	568.910102	1135.80565	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.584	1	31.695	31.195	32.195	0.11117								0	0	0	0.45132	1	1455	1455		17.365	10.629	1				63789	6739	42427	42445	72349	72349					0.24318068161096562
VRALREPERI	10	Unmodified	_VRALREPERI_					0	0	0		ENSG00000204478|ENST00000602960|PRAMEF20	ENSG00000204478|ENST00000602960|PRAMEF20	ENSG00000204478|ENST00000602960|PRAMEF20	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8693237304688	2	619.870028	1237.7255	-0.18236	-0.00011304	-0.59862	-0.00037106	-0.78097	-0.0004841	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.86471	1	9677	9677		30.318	2.2362	1	2627900			63790	8447	42428	42446	72350	72350					0.11614974819917734
VRALREPERI	10	Unmodified	_VRALREPERI_					0	0	0		ENSG00000204478|ENST00000602960|PRAMEF20	ENSG00000204478|ENST00000602960|PRAMEF20	ENSG00000204478|ENST00000602960|PRAMEF20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8695068359375	2	619.870028	1237.7255	-0.30615	-0.00018977	-0.58957	-0.00036546	-0.89572	-0.00055523	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.86047	1	10049	10049		23.523	0.94304	1	4796900			63791	8447	42428	42446	72351	72351					0.11614974819917734
VRALREPERI	10	Unmodified	_VRALREPERI_					0	0	0		ENSG00000204478|ENST00000602960|PRAMEF20	ENSG00000204478|ENST00000602960|PRAMEF20	ENSG00000204478|ENST00000602960|PRAMEF20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.869384765625	2	619.870028	1237.7255	2.311	0.0014325	-3.2878	-0.002038	-0.97675	-0.00060546	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.67571	1	10330	10330		45.972	0.020292	1	4854700			63792	8447	42428	42446	72352	72352					0.11614974819917734
VRALREPERI	10	Unmodified	_VRALREPERI_					0	0	0		ENSG00000204478|ENST00000602960|PRAMEF20	ENSG00000204478|ENST00000602960|PRAMEF20	ENSG00000204478|ENST00000602960|PRAMEF20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8692016601562	2	619.870028	1237.7255	0.62246	0.00038584	-1.8404	-0.0011408	-1.2179	-0.00075497	619.8687823008486	94.059	2.9324	94.104	92.154	95.087	0.045448					223	69	4	0	0	0	0.80179	1	9813	9813		39.253	3.6345	1	2371600			63793	8447	42428	42446	72353	72353					0.11614974819917734
VRALREPERI	10	Unmodified	_VRALREPERI_					0	0	0		ENSG00000204478|ENST00000602960|PRAMEF20	ENSG00000204478|ENST00000602960|PRAMEF20	ENSG00000204478|ENST00000602960|PRAMEF20	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8692626953125	2	619.870028	1237.7255	0.87762	0.00054401	-1.8204	-0.0011284	-0.94278	-0.0005844	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.82886	1	9908	9908		37.812	1.3648	1	6574700			63794	8447	42428	42446	72354	72354					0.11614974819917734
VRALRMEFV	9	Unmodified	_VRALRMEFV_					0	0	0		ENSG00000125901|ENST00000380325|MRPS26	ENSG00000125901|ENST00000380325|MRPS26	ENSG00000125901|ENST00000380325|MRPS26	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.8199462890625	2	560.818418	1119.62228	2.0312	0.0011391	0.45892	0.00025737	2.4901	0.0013965	560.8185510503406	92.547	2.8653	92.482	91.358	94.223	-0.06414					202	67	4	0	0	0	0.62081	1	9816	9816		45.952	0	1	788180			63795	3426	42429	42447	72355	72355					0.06725771107767287
VRALRPRPGG	10	Unmodified	_VRALRPRPGG_					0	0	0		ENST00000315367.3_1_8:96146046-96166295:+|nuORF	ENST00000315367.3_1_8:96146046-96166295:+|nuORF	ENST00000315367.3_1_8:96146046-96166295:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	539.8321533203125	2	539.833249	1077.65194	-1.4852	-0.00080178	-0.039305	-2.1218E-05	-1.5245	-0.000823	539.8330948875176	94.99	1.5819	95.192	94.693	96.275	0.20242					96	37	4	0	0	0	0.86718	1	9666	9666		27.882	3.3631	1	869370			63796	9975	42430	42448	72356	72356					0.1162247116810704
VRALRRSFE	9	Unmodified	_VRALRRSFE_					0	0	0			REV__ENST00000393094.6_1_11:107879842-107880085:+|nuORF	REV__ENST00000393094.6_1_11:107879842-107880085:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3294677734375	2	567.330539	1132.64652	0.79571	0.00045143	-2.2136	-0.0012558	-1.4178	-0.00080439	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.7932	1	9464	9464		24.203	0	1	18145000	+		63797	26047	42431	42449	72357	72357					0.0855074758567298
VRALSQLGSA	10	Unmodified	_VRALSQLGSA_					0	0	0		nc|ENSG00000124356|O95630-2|STAMBP;ENSG00000124356|ENST00000394070|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2903137207031	2	501.290548	1000.56654	-0.97974	-0.00049113	0.89004	0.00044617	-0.089695	-4.4963E-05	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.86698	1	7926	7926		28.081	3.5623	1	2111000			63798	3330	42432	42450	72358	72358					0.06628261191792717
VRALSQLGSA	10	Unmodified	_VRALSQLGSA_					0	0	0		nc|ENSG00000124356|O95630-2|STAMBP;ENSG00000124356|ENST00000394070|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2906188964844	2	501.290548	1000.56654	-0.9424	-0.00047241	0.84818	0.00042518	-0.094216	-4.7229E-05	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.86698	1	8221	8221		28.081	1.3886	1	6939200			63799	3330	42432	42450	72359	72359					0.06628261191792717
VRALSQLGSA	10	Unmodified	_VRALSQLGSA_					0	0	0		nc|ENSG00000124356|O95630-2|STAMBP;ENSG00000124356|ENST00000394070|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904968261719	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.86348	1	9096	9096		31.53	4.8369	1	9565500			63800	3330	42432	42450	72360	72360					0.06628261191792717
VRALSQLGSA	10	Unmodified	_VRALSQLGSA_					0	0	0		nc|ENSG00000124356|O95630-2|STAMBP;ENSG00000124356|ENST00000394070|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29058837890625	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.80179	1	9088	9088		39.253	3.6345	1	9883700			63801	3330	42432	42450	72361	72361					0.06628261191792717
VRALSQLGSA	10	Unmodified	_VRALSQLGSA_					0	0	0		nc|ENSG00000124356|O95630-2|STAMBP;ENSG00000124356|ENST00000394070|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2900085449219	2	501.290548	1000.56654	0.65622	0.00032896	-1.0593	-0.000531	-0.40304	-0.00020204	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.82886	1	8320	8320		37.812	2.6108	1	2931000			63802	3330	42432	42450	72362	72362					0.06628261191792717
VRALSQLGSA	10	Unmodified	_VRALSQLGSA_					0	0	0		nc|ENSG00000124356|O95630-2|STAMBP;ENSG00000124356|ENST00000394070|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2901306152344	2	501.290548	1000.56654	-1.4828	-0.00074334	1.1379	0.00057041	-0.34496	-0.00017293	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.86348	1	8182	8182		31.53	0	1	2793500			63803	3330	42432	42450	72363	72363					0.06628261191792717
VRALSQLGSA	10	Unmodified	_VRALSQLGSA_					0	0	0		nc|ENSG00000124356|O95630-2|STAMBP;ENSG00000124356|ENST00000394070|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	nc|ENSG00000124356|O95630-2|STAMBP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2904968261719	2	501.290548	1000.56654	-0.45423	-0.0002277	0.14645	7.3413E-05	-0.30779	-0.00015429	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.77314	2	10240	10144;10240		40.778	3.639	1	9727400			63804	3330	42432	42450	72364;72365	72365					0.06628261191792717
VRAMFWVL	8	Unmodified	_VRAMFWVL_					0	0	0			REV__nc|ENSG00000138613|Q8WW43-2|APH1B	REV__nc|ENSG00000138613|Q8WW43-2|APH1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	511.7876281738281	2	511.286223	1020.55789	-0.92708	-0.000474	2.1093	0.0010785	1.1823	0.00060447	511.2872429876972	41.91	2.375	41.872	41.45	43.825	-0.038223					133	56	5	0	0	0	0.88915	1	3308	3308		35.201	1.0282	1	7049200	+		63805	19481	42433	42451	72366	72366					0.0484361602162835
VRAMKARRVKA	11	Unmodified	_VRAMKARRVKA_					0	0	0			REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	643.4055786132812	2	643.403515	1284.79248	1.6039	0.001032	2.327	0.0014972	3.9309	0.0025292	643.4048904399143	105.48	3.0953	105.64	104.92	108.01	0.15924					279	77	5	0	0	0	0.7342	1	11432	11432		25.574	1.0549	1	21138000	+		63806	29820	42434	42452	72367	72367					0.16147306830043817
VRANPPLLF	9	Unmodified	_VRANPPLLF_					0	0	0		nc|ENSG00000085552|Q9P2J2-2|IGSF9;ENSG00000085552|ENST00000368094|IGSF9;ENST00000476102.1_1_1:159900586-159913268:-|nuORF	nc|ENSG00000085552|Q9P2J2-2|IGSF9	nc|ENSG00000085552|Q9P2J2-2|IGSF9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8087158203125	2	513.808377	1025.6022	-0.12671	-6.5103E-05	1.3179	0.00067714	1.1912	0.00061204	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.7932	1	4013	4013		18.324	0	1	1731500			63807	1533	42435	42453	72368	72368					0.0904234343945518
VRANPPLLF	9	Unmodified	_VRANPPLLF_					0	0	0		nc|ENSG00000085552|Q9P2J2-2|IGSF9;ENSG00000085552|ENST00000368094|IGSF9;ENST00000476102.1_1_1:159900586-159913268:-|nuORF	nc|ENSG00000085552|Q9P2J2-2|IGSF9	nc|ENSG00000085552|Q9P2J2-2|IGSF9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8092651367188	2	513.808377	1025.6022	0.34332	0.0001764	0.75485	0.00038785	1.0982	0.00056425	513.8086368777277	47.988	1.7133	48.025	47.631	49.344	0.037735					152	48	4	0	0	0	0.7932	1	3608	3608		25.45	8.0852	1	1306000			63808	1533	42435	42453	72369	72369					0.0904234343945518
VRANPPLLF	9	Unmodified	_VRANPPLLF_					0	0	0		nc|ENSG00000085552|Q9P2J2-2|IGSF9;ENSG00000085552|ENST00000368094|IGSF9;ENST00000476102.1_1_1:159900586-159913268:-|nuORF	nc|ENSG00000085552|Q9P2J2-2|IGSF9	nc|ENSG00000085552|Q9P2J2-2|IGSF9	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8081665039062	2	513.808377	1025.6022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.947	1	46.843	46.343	47.343	0.89542								0	0	0	0.35186	1	4317	4317		47.916	7.343	1				63809	1533	42435	42453	72370	72370					0.0904234343945518
VRAPNEKTG	9	Unmodified	_VRAPNEKTG_					0	0	0			REV__nc|ENSG00000196739|Q8IZC6-2|COL27A1	REV__nc|ENSG00000196739|Q8IZC6-2|COL27A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	486.2671813964844	2	486.267073	970.519593	0.66104	0.00032144	-0.51885	-0.0002523	0.14219	6.9142E-05	486.26672460916404	86.17	4.7018	86.319	85.168	89.869	0.14902					331	110	5	0	0	0	0.67345	1	8464	8464		42.396	1.618	1	1702800	+		63810	23167	42436	42454	72371	72371					0.033154016406683695
VRAPPQFV	8	Unmodified	_VRAPPQFV_					0	0	0		nc|ENSG00000185008|Q9HCK4|ROBO2;nc|ENSG00000185008|Q9HCK4-3|ROBO2;nc|ENSG00000185008|Q9HCK4-2|ROBO2	nc|ENSG00000185008|Q9HCK4|ROBO2	nc|ENSG00000185008|Q9HCK4|ROBO2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26397705078125	2	457.266345	912.518136	-1.1676	-0.0005339	-3.1744	-0.0014516	-4.342	-0.0019855	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.86288	1	7541	7541		26.796	0.10319	1	1329900			63811	15148	42437	42455	72372	72372					0.05837812342565485
VRAPQPLPP	9	Unmodified	_VRAPQPLPP_					0	0	0			REV__ENST00000600885.1_1_19:8591488-8592268:-|nuORF	REV__ENST00000600885.1_1_19:8591488-8592268:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.791015625	2	487.792727	973.5709	-1.3135	-0.00064074	-3.0168	-0.0014716	-4.3304	-0.0021123	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.77546	2	8707	8538;8707		31.955	3.7006	1	2239000	+		63812	29314	42438	42456	72373;72374	72374					0.08305770405377189
VRAPQPLPP	9	Unmodified	_VRAPQPLPP_					0	0	0			REV__ENST00000600885.1_1_19:8591488-8592268:-|nuORF	REV__ENST00000600885.1_1_19:8591488-8592268:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7908935546875	2	487.792727	973.5709	-0.48923	-0.00023864	-3.7823	-0.001845	-4.2716	-0.0020836	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.77546	1	9697	9697		31.955	2.8053	1	1599600	+		63813	29314	42438	42456	72375	72375					0.08305770405377189
VRAPQPVF	8	Unmodified	_VRAPQPVF_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2635192871094	2	457.266345	912.518136	-1.2409	-0.00056743	-3.1044	-0.0014196	-4.3454	-0.001987	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.86791	1	7914	7914		28.254	2.8041	1	2957200			63814	15003	42439	42457	72376	72376					0.05837812342565485
VRAPQPVF	8	Unmodified	_VRAPQPVF_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2638244628906	2	457.266345	912.518136	-0.13162	-6.0186E-05	-4.207	-0.0019237	-4.3386	-0.0019839	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.86288	1	7789	7789		26.796	0	1	1194000			63815	15003	42439	42457	72377	72377					0.05837812342565485
VRAPRKRGNKQ	11	Unmodified	_VRAPRKRGNKQ_					0	0	0			REV__ENST00000395718.6_1_14:52164938-52169257:+|nuORF	REV__ENST00000395718.6_1_14:52164938-52169257:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2679138183594	3	437.268971	1308.78508	-1.6775	-0.00073351	-0.94072	-0.00041135	-2.6182	-0.0011449	437.2684582289779	53.964	2.0642	53.964	53.314	55.379	0					208	68	5	0	0	0	0.74771	1	4482	4482		22.562	2.9347	1	2305800	+		63816	26119	42440	42458	72378	72378					0.1430429055399145
VRAPRKRGNKQ	11	Unmodified	_VRAPRKRGNKQ_					0	0	0			REV__ENST00000395718.6_1_14:52164938-52169257:+|nuORF	REV__ENST00000395718.6_1_14:52164938-52169257:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.26776123046875	3	437.268971	1308.78508	1.089	0.00047619	-3.8083	-0.0016652	-2.7193	-0.001189	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.77205	1	4762	4762		17.167	0.63689	1	2745300	+		63817	26119	42440	42458	72379	72379					0.1430429055399145
VRAPRVGG	8	Unmodified	_VRAPRVGG_					0	0	0		ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.247802734375	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.19	1	116.16	115.66	116.66	-0.02433								0	0	0	0.30674	1	12861	12861		15.636	0	1				63818	9674	42441	42459	72380	72380					0.06959774885569914
VRAPRVGG	8	Unmodified	_VRAPRVGG_					0	0	0		ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.247802734375	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.32	1	115.34	114.84	115.84	0.026466								0	0	0	0.30125	1	12647	12647		20.482	5.8177	1				63819	9674	42441	42459	72381	72381					0.06959774885569914
VRAPRVGG	8	Unmodified	_VRAPRVGG_					0	0	0		ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.24725341796875	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.9	1	115.83	115.33	116.33	-0.069672								0	0	0	0.29568	1	12436	12436		35.201	8.4046	1				63820	9674	42441	42459	72382	72382					0.06959774885569914
VRAPRVGG	8	Unmodified	_VRAPRVGG_					0	0	0		ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.248291015625	2	406.248486	810.48242	3.1451	0.0012777	-2.8339	-0.0011513	0.31112	0.00012639	406.2472569987741	110.94	0.91206	110.99	110.73	111.64	0.054062					48	31	2	0	0	0	0.86288	1	13422	13422		26.796	5.0938	1	457940			63821	9674	42441	42459	72383	72383					0.06959774885569914
VRAPRVGG	8	Unmodified	_VRAPRVGG_					0	0	0		ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	ENST00000290858.10_1_16:67063120-67063363:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2494812011719	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.97	1	114.98	114.48	115.48	0.0094528								0	0	0	0.29694	1	13863	13863		37.028	8.7742	1				63822	9674	42441	42459	72384	72384					0.06959774885569914
VRAPVATEVLL	11	Unmodified	_VRAPVATEVLL_					0	0	0		ENSG00000282936|ENST00000634965|unknown	ENSG00000282936|ENST00000634965|unknown	ENSG00000282936|ENST00000634965|unknown	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	584.3568115234375	2	584.358431	1166.70231	-0.075702	-4.4237E-05	-4.1912	-0.0024491	-4.2669	-0.0024934	584.3560423589818	92.438	3.1079	92.483	91.102	94.21	0.045448					194	73	3	0	0	0	0.7144	1	9656	9656		29.17	0	1	588330			63823	9057	42442	42460	72385	72385					0.1256253598260173
VRAPVLMAVA	10	Unmodified	_VRAPVLMAVA_					0	0	0			REV__ENST00000480991.1_1_1:1597223-1601267:-|nuORF	REV__ENST00000480991.1_1_1:1597223-1601267:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.80859375	2	513.810062	1025.60557	0.14837	7.6233E-05	-2.2121	-0.0011366	-2.0637	-0.0010603	513.8088134492856	48.067	1.4161	48.057	47.714	49.13	-0.0093269					122	36	4	0	0	0	0.86147	1	4021	4021		33.516	3.0119	1	1557500	+		63824	23080	42443	42461	72386	72386					0.09379270221802471
VRAPWWPF	8	Unmodified	_VRAPWWPF_					0	0	0			REV__ENSG00000171813|ENST00000305233|PWWP2B	REV__ENSG00000171813|ENST00000305233|PWWP2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.781494140625	2	529.782162	1057.54977	0.45896	0.00024315	-2.3569	-0.0012487	-1.898	-0.0010055	529.7806261653575	52.825	1.5318	53.249	52.638	54.169	0.42348					117	36	6	0	0	0	0.89457	1	5274	5274		37.028	4.2161	1	6482700	+		63825	21772	42444	42462	72387	72387					0.023298050964967842
VRAPWWPF	8	Unmodified	_VRAPWWPF_					0	0	0			REV__ENSG00000171813|ENST00000305233|PWWP2B	REV__ENSG00000171813|ENST00000305233|PWWP2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7821655273438	2	529.782162	1057.54977	0.065511	3.4706E-05	-2.2122	-0.001172	-2.1467	-0.0011373	529.7807903370734	52.522	1.485	53.136	52.584	54.069	0.61446					111	35	5	0	0	0	0.92176	1	5233	5233		46.766	3.9022	1	6729200	+		63826	21772	42444	42462	72388	72388					0.023298050964967842
VRAQAVLAF	9	Unmodified	_VRAQAVLAF_					0	0	0			REV__ENST00000565140.5_3_16:28489128-28499933:-|nuORF	REV__ENST00000565140.5_3_16:28489128-28499933:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	487.79058837890625	2	487.792727	973.5709	-0.24073	-0.00011743	-3.9662	-0.0019347	-4.2069	-0.0020521	487.79075680668626	84.242	3.868	84.689	83.47	87.338	0.44736					268	94	4	0	0	0	0.78058	2	9716	9716;9786		30.504	2.6214	1	1981400	+		63827	28849	42445	42463	72389;72390	72389					0.08305770405377189
VRAQRLTN	8	Unmodified	_VRAQRLTN_					0	0	0			REV__ENSG00000198092|ENST00000356291|TMPRSS11F	REV__ENSG00000198092|ENST00000356291|TMPRSS11F	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8055725097656	2	479.283057	956.551562	-0.91519	-0.00043863	1.4057	0.00067371	0.49048	0.00023508	479.28238770114723	40.106	0.24574	40.112	40.029	40.274	0.0065002					7	5	2	0	0	0	0.4196	1	2521	2521		17.365	0	1	26065	+		63828	23298	42446	42464	72391	72391					0.07154814114448982
VRAQRRRQ	8	Unmodified	_VRAQRRRQ_					0	0	0			REV__ENSG00000100739|ENST00000216629|BDKRB1	REV__ENSG00000100739|ENST00000216629|BDKRB1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	535.3255615234375	2	535.326122	1068.63769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.84	1	110.92	110.42	111.42	0.073685								0	0	0	0.29631	1	11923	11923		25.45	3.7478	1		+		63829	17218	42447	42465	72392	72392					0.10611818739835144
VRAQSGLATV	10	Unmodified	_VRAQSGLATV_					0	0	0			REV__nc|ENSG00000274736|P55773|CCL23	REV__nc|ENSG00000274736|P55773|CCL23	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2905578613281	2	501.290548	1000.56654	-0.9424	-0.00047241	0.84818	0.00042518	-0.094216	-4.7229E-05	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.86272	1	8497	8497		24.519	1.4767	1	6939200	+		63830	24005	42448	42466	72393	72393					0.06628261191804086
VRARGGGDI	9	Unmodified	_VRARGGGDI_					0	0	0		ENSG00000047188|ENST00000161863|YTHDC2	ENSG00000047188|ENST00000161863|YTHDC2	ENSG00000047188|ENST00000161863|YTHDC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.75469970703125	2	450.754133	899.493713	0.36741	0.00016561	0.13246	5.9707E-05	0.49987	0.00022532	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.78536	1	8140	8140		29.15	0.89528	1	394230			63831	955	42449	42467	72394	72394					0.039945521890558666
VRARGSSGRTT	11	Unmodified	_VRARGSSGRTT_					0	0	0		ENST00000227756.4_1_11:11643078-11643216:-|nuORF	ENST00000227756.4_1_11:11643078-11643216:-|nuORF	ENST00000227756.4_1_11:11643078-11643216:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	574.3192749023438	2	574.31816	1146.62177	-1.0331	-0.00059332	3.2281	0.001854	2.195	0.0012606	574.3199370284386	94.384	4.3871	94.453	93.215	97.602	0.068344					291	103	5	0	0	0	0.6493	1	9897	9897		38.754	3.6016	1	1380900			63832	9203	42450	42468	72395	72395					0.054320677122859706
VRARHELPVG	10	Unmodified	_VRARHELPVG_					0	0	0			REV__nc|ENSG00000139835|Q5TC63-3|GRTP1	REV__nc|ENSG00000139835|Q5TC63-3|GRTP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.329833984375	2	567.330539	1132.64652	0.77491	0.00043963	-1.6405	-0.0009307	-0.86557	-0.00049107	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.86718	1	9055	9055		27.882	0	1	6344600	+		63833	19574	42451	42469	72396	72396					0.08550747585650242
VRARVGGD	8	Unmodified	_VRARVGGD_					0	0	0		ENST00000479701.5_1_22:50714135-50720918:-|nuORF	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.76165771484375	2	415.235576	828.456599	2.7581	0.0011452	4.2203	0.0017524	6.9784	0.0028977	415.237262794839	110.5	0.97507	110.55	110.22	111.2	0.054062					57	33	2	0	0	0	0.4196	1	13441	13441		40.573	12.318	1	403520			63834	12417	42452	42470	72397	72397					0.035508806432858364
VRARVGGD	8	Unmodified	_VRARVGGD_					0	0	0		ENST00000479701.5_1_22:50714135-50720918:-|nuORF	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	415.235576	828.456599	5.7128	0.0023722	1.3944	0.000579	7.1072	0.0029512	415.23615105178436	110.38	0.68556	110.45	110.23	110.92	0.067993	-0.052889	-0.00086112	NaN	40.573	51	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	393590			63835	12417	42452	42470							0.035508806432858364
VRASFILEK	9	Unmodified	_VRASFILEK_					0	0	0			REV__nc|ENSG00000148090|Q13825-2|AUH	REV__nc|ENSG00000148090|Q13825-2|AUH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8168334960938	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.77244	1	8508	8508		32.812	2.3088	1	1422300	+		63836	20095	42453	42471	72398	72398					0.09498308748334239
VRASFILEK	9	Unmodified	_VRASFILEK_					0	0	0			REV__nc|ENSG00000148090|Q13825-2|AUH	REV__nc|ENSG00000148090|Q13825-2|AUH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8168334960938	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.77244	2	8699	8699;8712		32.812	0	1	4022300	+		63837	20095	42453	42471	72399;72400	72399					0.09498308748334239
VRASFILEK	9	Unmodified	_VRASFILEK_					0	0	0			REV__nc|ENSG00000148090|Q13825-2|AUH	REV__nc|ENSG00000148090|Q13825-2|AUH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8170166015625	2	531.818941	1061.62333	-1.264	-0.00067223	-2.5284	-0.0013447	-3.7925	-0.0020169	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.69624	1	10559	10559		40.778	11.629	1	4586300	+		63838	20095	42453	42471	72401	72401					0.09498308748334239
VRASKDLLHR	10	Unmodified	_VRASKDLLHR_					0	0	0		nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8562622070312	2	597.856921	1193.69929	-0.56225	-0.00033615	-0.53243	-0.00031831	-1.0947	-0.00065446	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.8545	1	9515	9515		36.447	0.82846	1	2042000			63839	687	42454	42472	72402	72402					0.11018705648439209
VRASKDLLHR	10	Unmodified	_VRASKDLLHR_					0	0	0		nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.8563232421875	2	597.856921	1193.69929	-0.43134	-0.00025788	-0.57301	-0.00034258	-1.0043	-0.00060046	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.8545	2	9846	9846;9893		36.447	0	1	6857100			63840	687	42454	42472	72403;72404	72403					0.11018705648439209
VRASKDLLHR	10	Unmodified	_VRASKDLLHR_					0	0	0		nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	nc|ENSG00000005810|O75592-2|MYCBP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.8562622070312	2	597.856921	1193.69929	-1.2962	-0.00077492	0.5934	0.00035477	-0.70276	-0.00042015	598.3589924641743	94.317	5.5544	94.515	93.356	98.911	0.19827					368	130	4	0	0	0	0.82886	2	9712	9520;9712		37.812	4.9991	1	9481100			63841	687	42454	42472	72405;72406	72406					0.11018705648439209
VRASMIPPPPL	11	Unmodified	_VRASMIPPPPL_					0	0	0			REV__ENSG00000205307|ENST00000622764|SAP25	REV__ENSG00000205307|ENST00000622764|SAP25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3427734375	2	589.341726	1176.6689	-0.65438	-0.00038565	2.6476	0.0015603	1.9932	0.0011747	589.3431098547327	94.108	5.9798	94.153	93.158	99.138	0.045448					462	140	4	0	0	0	0.69995	1	10262	10262		31.53	1.2121	1	16804000	+		63842	23548	42455	42473	72407	72407					0.08763210939059718
VRASMIPPPPL	11	Unmodified	_VRASMIPPPPL_					0	0	0			REV__ENSG00000205307|ENST00000622764|SAP25	REV__ENSG00000205307|ENST00000622764|SAP25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.343017578125	2	589.341726	1176.6689	-1.324	-0.0007803	3.288	0.0019378	1.964	0.0011575	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.66929	1	9566	9566		36.447	6.129	1	17904000	+		63843	23548	42455	42473	72408	72408					0.08763210939059718
VRASMIPPPPL	11	Unmodified	_VRASMIPPPPL_					0	0	0			REV__ENSG00000205307|ENST00000622764|SAP25	REV__ENSG00000205307|ENST00000622764|SAP25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3431396484375	2	589.341726	1176.6689	-1.05	-0.00061881	3.2818	0.0019341	2.2318	0.0013153	589.3435611680267	91.272	1.3839	91.742	90.644	92.028	0.47068					106	33	4	0	0	0	0.66929	1	10890	10890		36.447	3.6343	1	1967800	+		63844	23548	42455	42473	72409	72409					0.08763210939059718
VRASSSGGAR	10	Unmodified	_VRASSSGGAR_					0	0	0			REV__ENSG00000167916|ENST00000264651|KRT24	REV__ENSG00000167916|ENST00000264651|KRT24	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2524719238281	2	474.254497	946.494441	0.90723	0.00043026	-0.5946	-0.00028199	0.31263	0.00014826	474.2540659981243	22.601	1.5549	22.183	21.652	23.207	-0.41879					50	35	2	0	0	0	0.8651	1	947	947		25.574	1.07	1	124210	+	+	63845	16006	42456	42474	72410	72410					0.019053468381002858
VRATDQLKA	9	Unmodified	_VRATDQLKA_					0	0	0			REV__ENSG00000141579|ENST00000269394|ZNF750	REV__ENSG00000141579|ENST00000269394|ZNF750	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.2904357910156	2	501.290548	1000.56654	0.6794	0.00034058	-0.93115	-0.00046678	-0.25175	-0.0001262	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.73802	3	8861	8653;8677;8861		37.812	2.6108	1	9566900	+		63846	19702	42457	42475	72411;72412;72413	72413					0.06628261191792717
VRATPASSR	9	Unmodified	_VRATPASSR_					0	0	0			REV__ENSG00000101161|ENST00000266079|PRPF6	REV__ENSG00000101161|ENST00000266079|PRPF6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7669372558594	2	472.76724	943.519927	-0.10807	-5.1094E-05	0.17013	8.0433E-05	0.062057	2.9339E-05	472.7672804222602	84.04	4.8706	84.107	82.787	87.658	0.066727					275	112	4	0	0	0	0.7932	1	8515	8515		26.693	2.4902	1	501240	+		63847	17246	42458	42476	72414	72414					0.045908213605116543
VRATPVSQTT	10	Unmodified	_VRATPVSQTT_					0	0	0		ENSG00000137496|ENST00000393703|IL18BP;nc|ENSG00000137496|O95998-3|IL18BP;nc|ENSG00000137496|O95998-4|IL18BP	ENSG00000137496|ENST00000393703|IL18BP	ENSG00000137496|ENST00000393703|IL18BP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.2926025390625	2	530.293288	1058.57202	1.6334	0.0008662	-1.7145	-0.0009092	-0.081076	-4.2994E-05	530.292423509434	90.374	3.3435	90.824	89.692	93.036	0.45058					170	82	4	0	0	0	0.80179	1	10664	10664		39.253	3.6345	1	1816400			63848	4205	42459	42477	72415	72415					0.04507939983614051
VRATVRAAS	9	Unmodified	_VRATVRAAS_					0	0	0			REV__ENSG00000140274|ENST00000323030|DUOXA2	REV__ENSG00000140274|ENST00000323030|DUOXA2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77764892578125	2	465.777608	929.540663	-1.2002	-0.00055902	1.1319	0.00052724	-0.068228	-3.1779E-05	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.71772	2	7768	7734;7768		39.253	6.4404	1	683640	+		63849	19603	42460	42478	72416;72417	72417					0.07307411740168845
VRATVRAAS	9	Unmodified	_VRATVRAAS_					0	0	0			REV__ENSG00000140274|ENST00000323030|DUOXA2	REV__ENSG00000140274|ENST00000323030|DUOXA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7776184082031	2	465.777608	929.540663	-0.11871	-5.5291E-05	0.041983	1.9555E-05	-0.076723	-3.5736E-05	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.70638	2	8142	8046;8142		40.058	12.176	1	1083800	+		63850	19603	42460	42478	72418;72419	72419					0.07307411740168845
VRATVRAAS	9	Unmodified	_VRATVRAAS_					0	0	0			REV__ENSG00000140274|ENST00000323030|DUOXA2	REV__ENSG00000140274|ENST00000323030|DUOXA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774658203125	2	465.777608	929.540663	0.52254	0.00024339	-0.63525	-0.00029589	-0.11271	-5.2499E-05	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.66686	5	8325	8243;8289;8325;8372;8434		42.864	10.909	1	1330400	+		63851	19603	42460	42478	72420;72421;72422;72423;72424	72422					0.07307411740168845
VRATVRAAS	9	Unmodified	_VRATVRAAS_					0	0	0			REV__ENSG00000140274|ENST00000323030|DUOXA2	REV__ENSG00000140274|ENST00000323030|DUOXA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7775573730469	2	465.777608	929.540663	-0.087401	-4.0709E-05	-0.014423	-6.718E-06	-0.10182	-4.7428E-05	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.64555	2	8149	8149;8264		44.377	4.8675	1	1330000	+		63852	19603	42460	42478	72425;72426	72425					0.07307411740168845
VRATVRAAS	9	Unmodified	_VRATVRAAS_					0	0	0			REV__ENSG00000140274|ENST00000323030|DUOXA2	REV__ENSG00000140274|ENST00000323030|DUOXA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77752685546875	2	465.777608	929.540663	-1.0371	-0.00048307	0.85648	0.00039893	-0.18065	-8.4142E-05	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.64555	4	7940	7881;7928;7940;7998		44.377	10.862	1	1384500	+		63853	19603	42460	42478	72427;72428;72429;72430	72429					0.07307411740168845
VRATVRAAS	9	Unmodified	_VRATVRAAS_					0	0	0			REV__ENSG00000140274|ENST00000323030|DUOXA2	REV__ENSG00000140274|ENST00000323030|DUOXA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7776184082031	2	465.777608	929.540663	0.60386	0.00028126	-0.75167	-0.00035011	-0.14781	-6.8848E-05	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.73802	2	8026	7992;8026		37.812	4.5581	1	1082300	+		63854	19603	42460	42478	72431;72432	72432					0.07307411740168845
VRATVRAAS	9	Unmodified	_VRATVRAAS_					0	0	0			REV__ENSG00000140274|ENST00000323030|DUOXA2	REV__ENSG00000140274|ENST00000323030|DUOXA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7774353027344	2	465.777608	929.540663	-1.5315	-0.00071332	1.4551	0.00067775	-0.076382	-3.5577E-05	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.66686	1	7847	7847		42.864	0.46813	1	991370	+		63855	19603	42460	42478	72433	72433					0.07307411740168845
VRAVGCLPVL	10	Unmodified	_VRAVGCLPVL_					0	0	0		nc|ENSG00000144029|P82675-2|MRPS5;ENST00000475895.5_1_2:95770271-95787536:-|nuORF;ENSG00000144029|ENST00000272418|MRPS5	nc|ENSG00000144029|P82675-2|MRPS5	nc|ENSG00000144029|P82675-2|MRPS5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8095092773438	2	513.810062	1025.60557	-0.38907	-0.00019991	-1.6263	-0.0008356	-2.0153	-0.0010355	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.86589	1	3584	3584		29.15	3.6994	1	1358900			63856	14973	42461	42479	72434	72434					0.09379270221802471
VRAVPHSARP	10	Unmodified	_VRAVPHSARP_					0	0	0		ENST00000607882.5_1_7:66205530-66205641:+|nuORF	ENST00000607882.5_1_7:66205530-66205641:+|nuORF	ENST00000607882.5_1_7:66205530-66205641:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3167114257812	2	545.317432	1088.62031	0.15577	8.4944E-05	-1.2744	-0.00069494	-1.1186	-0.00060999	545.3166046576314	90.41	6.0564	90.628	89.48	95.536	0.21736					448	145	4	0	0	0	0.82886	1	9392	9392		37.812	3.8899	1	17220000			63857	14470	42462	42480	72435	72435					0.07954478414194455
VRAVPHSARP	10	Unmodified	_VRAVPHSARP_					0	0	0		ENST00000607882.5_1_7:66205530-66205641:+|nuORF	ENST00000607882.5_1_7:66205530-66205641:+|nuORF	ENST00000607882.5_1_7:66205530-66205641:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3167724609375	2	545.317432	1088.62031	-0.0069207	-3.774E-06	-1.1928	-0.00065047	-1.1997	-0.00065424	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.8545	1	10388	10388		36.447	0	1	4868200			63858	14470	42462	42480	72436	72436					0.07954478414194455
VRAVPPPPPP	10	Unmodified	_VRAVPPPPPP_					0	0	0		nc|ENSG00000224383|P0C7W0-4|PRR29;ENSG00000224383|ENST00000412177|PRR29	nc|ENSG00000224383|P0C7W0-4|PRR29	nc|ENSG00000224383|P0C7W0-4|PRR29	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.808837890625	2	513.808377	1025.6022	0.35777	0.00018383	0.79125	0.00040655	1.149	0.00059038	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.86201	1	3928	3928		24.203	1.1603	1	1443600			63859	8703	42463	42481	72437	72437					0.0904234343945518
VRAVWLLDDLP	11	Unmodified	_VRAVWLLDDLP_					0	0	0		nc|ENSG00000123179|Q9BY08-3|EBPL	nc|ENSG00000123179|Q9BY08-3|EBPL	nc|ENSG00000123179|Q9BY08-3|EBPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	648.8736572265625	2	648.869163	1295.72377	-0.0025716	-1.6686E-06	4.319	0.0028025	4.3164	0.0028008	648.8719439244529	99.494	2.1461	99.535	98.831	100.98	0.041107					134	49	3	0	0	0	0.67778	1	10655	10655		35.152	1.0655	1	250130			63860	14882	42464	42482	72438	72438					0.08773921011311359
VRCLGVLI	8	Unmodified	_VRCLGVLI_					0	0	0			REV__nc|ENSG00000179873|P59045-3|NLRP11	REV__nc|ENSG00000179873|P59045-3|NLRP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.773681640625	2	436.772948	871.531344	-0.76279	-0.00033317	2.3111	0.0010094	1.5483	0.00067627	436.773961366412	27.779	2.36	27.682	26.915	29.275	-0.096947					107	54	4	0	0	0	0.81724	1	1625	1625		14.664	0.52697	1	1192900	+		63861	22361	42465	42483	72439	72439					0.0904392713028983
VRCLGVLI	8	Unmodified	_VRCLGVLI_					0	0	0			REV__nc|ENSG00000179873|P59045-3|NLRP11	REV__nc|ENSG00000179873|P59045-3|NLRP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.7738037109375	2	436.772948	871.531344	1.719	0.00075083	-0.11775	-5.1429E-05	1.6013	0.0006994	436.7728637819823	27.429	0.51398	27.174	26.811	27.325	-0.25465					26	11	3	0	0	0	0.86791	1	1606	1606		28.254	1.4582	1	997660	+		63862	22361	42465	42483	72440	72440					0.0904392713028983
VRCLKPKL	8	Unmodified	_VRCLKPKL_					0	0	0		ENST00000382031.5_1_15:43822480-43822663:+|nuORF	ENST00000382031.5_1_15:43822480-43822663:+|nuORF	ENST00000382031.5_1_15:43822480-43822663:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80615234375	2	478.807322	955.600092	-1.7576	-0.00084154	-0.70314	-0.00033667	-2.4607	-0.0011782	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.80706	1	2522	2522		19.36	1.995	1	336090			63863	10968	42466	42484	72441	72441					0.12051591429997188
VRCLKPKL	8	Unmodified	_VRCLKPKL_					0	0	0		ENST00000382031.5_1_15:43822480-43822663:+|nuORF	ENST00000382031.5_1_15:43822480-43822663:+|nuORF	ENST00000382031.5_1_15:43822480-43822663:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8058776855469	2	478.807322	955.600092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.716	1	43.716	43.216	44.216	0								0	0	0	0.30252	1	3120	3120		19.36	1.0356	1				63864	10968	42466	42484	72442	72442					0.12051591429997188
VRCLKPKL	8	Unmodified	_VRCLKPKL_					0	0	0		ENST00000382031.5_1_15:43822480-43822663:+|nuORF	ENST00000382031.5_1_15:43822480-43822663:+|nuORF	ENST00000382031.5_1_15:43822480-43822663:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.80426025390625	2	478.807322	955.600092	0.18646	8.928E-05	-3.0807	-0.001475	-2.8942	-0.0013858	478.8055992421829	39.579	2.8511	39.549	38.217	41.068	-0.030273					137	72	3	0	0	0	0.87479	1	2927	2927		30.504	11.144	1	371600			63865	10968	42466	42484	72443	72443					0.12051591429997188
VRCLKPKL	8	Unmodified	_VRCLKPKL_					0	0	0		ENST00000382031.5_1_15:43822480-43822663:+|nuORF	ENST00000382031.5_1_15:43822480-43822663:+|nuORF	ENST00000382031.5_1_15:43822480-43822663:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.8059387207031	2	478.807322	955.600092	-1.2024	-0.0005757	-0.89347	-0.0004278	-2.0958	-0.0010035	478.80677021187165	39.38	2.0608	39.333	37.987	40.048	-0.047001					113	47	3	0	0	0	0.82419	1	2879	2879		13.775	0	1	361300			63866	10968	42466	42484	72444	72444					0.12051591429997188
VRCLLGLV	8	Unmodified	_VRCLLGLV_					0	0	0		ENST00000525898.5_1_11:44609042-44626792:+|nuORF	REV__ENST00000262304.8_1_16:2141877-2142581:-|nuORF	REV__ENST00000262304.8_1_16:2141877-2142581:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.77435302734375	2	436.772948	871.531344	0.39754	0.00017364	0.64314	0.00028091	1.0407	0.00045454	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.80127	1	1234	1234		16.705	0	1	81327			63867	13245	42467	42485	72445	72445					0.09043927130301199
VRCLLGLV	8	Unmodified	_VRCLLGLV_					0	0	0		ENST00000525898.5_1_11:44609042-44626792:+|nuORF	REV__ENST00000262304.8_1_16:2141877-2142581:-|nuORF	REV__ENST00000262304.8_1_16:2141877-2142581:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	436.77392578125	2	436.772948	871.531344	-0.76279	-0.00033317	2.3111	0.0010094	1.5483	0.00067627	436.773961366412	27.779	2.36	27.682	26.915	29.275	-0.096947					107	54	4	0	0	0	0.85277	1	1614	1614		25.45	6.0902	1	1192900			63868	13245	42467	42485	72446	72446					0.09043927130301199
VRCNIKLELE	10	Unmodified	_VRCNIKLELE_					0	0	0		ENSG00000172352|ENST00000382407|CDY1B;ENSG00000182415|ENST00000250838|CDY2A;ENSG00000129873|ENST00000382867|CDY2B;ENSG00000172288|ENST00000306609|CDY1	ENSG00000172352|ENST00000382407|CDY1B	ENSG00000172352|ENST00000382407|CDY1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.8367309570312	2	608.839548	1215.66454	-0.43425	-0.00026439	-3.6339	-0.0022125	-4.0681	-0.0024768	608.8372155374379	110.58	1.0111	110.52	110.29	111.3	-0.055084					101	32	4	0	0	0	0.8651	1	12009	12009		25.574	2.5316	1	4475900			63869	3607	42468	42486	72447	72447					0.06533701725447827
VRCPVNLG	8	Unmodified	_VRCPVNLG_					0	0	0		ENST00000604213.1_1_15:100257715-100257970:-|nuORF	ENST00000604213.1_1_15:100257715-100257970:-|nuORF	ENST00000604213.1_1_15:100257715-100257970:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	429.23565673828125	2	429.23673	856.458907	-1.5383	-0.00066028	-0.7324	-0.00031437	-2.2707	-0.00097466	429.23631228522396	63.563	2.4446	63.563	62.881	65.325	0					341	112	4	0	0	0	0.86791	1	5548	5548		28.254	0	1	5885000			63870	14428	42469	42487	72448	72448					0.024935930567380638
VRCRPEPLGPP	11	Unmodified	_VRCRPEPLGPP_					0	0	0		nc|ENSG00000179886|Q53EQ6-2|TIGD5;ENSG00000179886|ENST00000504548|TIGD5	nc|ENSG00000179886|Q53EQ6-2|TIGD5	nc|ENSG00000179886|Q53EQ6-2|TIGD5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.5574645996094	3	407.55713	1219.64956	0.032568	1.3273E-05	0.25585	0.00010427	0.28842	0.00011755	407.5571057331784	30.741	0.74213	30.744	30.316	31.058	0.0037212					33	16	3	0	0	0	0.62914	1	2051	2051		41.08	1.0647	1	352140			63871	7300	42470	42488	72449	72449					0.048522546481535755
VRDDPVLRRL	10	Unmodified	_VRDDPVLRRL_					0	0	0		ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	ENSG00000124134|ENST00000537075|KCNS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8697509765625	2	619.870028	1237.7255	1.2689	0.00078657	-2.206	-0.0013675	-0.93712	-0.00058089	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.73395	1	9940	9940		42.864	5.0528	1	6493200			63872	3307	42471	42489	72450	72450					0.11614974819940471
VRDFLAFLQ	9	Unmodified	_VRDFLAFLQ_					0	0	0			REV__ENST00000566375.1_1_16:55583234-55585020:+|nuORF	REV__ENST00000566375.1_1_16:55583234-55585020:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8299560546875	2	554.811116	1107.60768	0.75303	0.00041779	2.3624	0.0013107	3.1155	0.0017285	554.8129629382956	89.347	0.17247	89.499	89.396	89.569	0.1519					5	3	2	0	0	0	0.20789	1	8908	8908		39.253	11.371	1	27908	+		63873	28868	42472	42490	72451	72451					0.05818022231278519
VRDGSFIY	8	Unmodified	_VRDGSFIY_					0	0	0			REV__nc|ENSG00000259334|Q86U02|LINC00596	REV__nc|ENSG00000259334|Q86U02|LINC00596	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8038635253906	2	478.745442	955.476331	-2.2991	-0.0011007	0.64343	0.00030804	-1.6557	-0.00079267	478.7458997533053	41.604	0.29132	41.608	41.419	41.711	0.0034142					9	6	2	0	0	0	0.4196	1	3049	3049		31.955	0	1	54290	+		63874	30247	42473	42491	72452	72452					-0.003187881366216061
VRDGSLINDI	10	Unmodified	_VRDGSLINDI_					0	0	0			REV__MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|51|2|anti-sense	REV__MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|51|2|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.2990112304688	2	551.29857	1100.58259	0.40018	0.00022062	-1.0242	-0.00056465	-0.62404	-0.00034403	551.297831017305	31.917	0.96489	31.91	31.385	32.35	-0.0061474					28	22	2	0	0	0	0.86225	1	1784	1784		32.751	8.2313	1	68431	+		63875	29647	42474	42492	72453	72453					0.03631922638032847
VRDKGISR	8	Unmodified	_VRDKGISR_					0	0	0		ENST00000545217.5_1_19:52074658-52074724:+|nuORF	ENST00000545217.5_1_19:52074658-52074724:+|nuORF	ENST00000545217.5_1_19:52074658-52074724:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7773132324219	2	465.777608	929.540663	-1.0371	-0.00048307	0.85648	0.00039893	-0.18065	-8.4142E-05	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.8537	1	7976	7976		25.574	1.07	1	1384500			63876	13576	42475	42493	72454	72454					0.07307411740180214
VRDKLLTSN	9	Unmodified	_VRDKLLTSN_					0	0	0			REV__ENSG00000153283|ENST00000352690|CD96	REV__ENSG00000153283|ENST00000352690|CD96	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035278320312	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.71772	2	8550	8550;8634		39.253	4.8369	1	9288900	+		63877	20343	42476	42494	72455;72456	72455					0.07224530363305348
VRDKLLTSN	9	Unmodified	_VRDKLLTSN_					0	0	0			REV__ENSG00000153283|ENST00000352690|CD96	REV__ENSG00000153283|ENST00000352690|CD96	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.303466796875	2	523.303655	1044.59276	1.699	0.00088911	-1.9056	-0.0009972	-0.20655	-0.00010809	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.76764	1	9136	9136		34.173	0	1	13080000	+		63878	20343	42476	42494	72457	72457					0.07224530363305348
VRDKLLTSN	9	Unmodified	_VRDKLLTSN_					0	0	0			REV__ENSG00000153283|ENST00000352690|CD96	REV__ENSG00000153283|ENST00000352690|CD96	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3034057617188	2	523.303655	1044.59276	1.0264	0.00053713	-1.3248	-0.00069329	-0.29841	-0.00015616	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.77696	1	8940	8940		31.53	3.6476	1	3817300	+		63879	20343	42476	42494	72458	72458					0.07224530363305348
VRDKLLTSN	9	Unmodified	_VRDKLLTSN_					0	0	0			REV__ENSG00000153283|ENST00000352690|CD96	REV__ENSG00000153283|ENST00000352690|CD96	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3034057617188	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.75725	1	8941	8941		36.447	0.82846	1	13442000	+		63880	20343	42476	42494	72459	72459					0.07224530363305348
VRDKLLTSN	9	Unmodified	_VRDKLLTSN_					0	0	0			REV__ENSG00000153283|ENST00000352690|CD96	REV__ENSG00000153283|ENST00000352690|CD96	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3053588867188	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.78528	1	8251	8251		29.17	3.596	1	3566700	+		63881	20343	42476	42494	72460	72460					0.07224530363305348
VRDKLLTSN	9	Unmodified	_VRDKLLTSN_					0	0	0			REV__ENSG00000153283|ENST00000352690|CD96	REV__ENSG00000153283|ENST00000352690|CD96	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.303466796875	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.77696	2	8691	8691;8956		31.53	1.2878	1	12189000	+		63882	20343	42476	42494	72461;72462	72461					0.07224530363305348
VRDKLVASN	9	Unmodified	_VRDKLVASN_					0	0	0			REV__nc|ENSG00000169607|Q8IYA6-3|CKAP2L	REV__nc|ENSG00000169607|Q8IYA6-3|CKAP2L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.29046630859375	2	501.290548	1000.56654	-0.064759	-3.2463E-05	-0.11321	-5.6752E-05	-0.17797	-8.9215E-05	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.76764	3	8631	8631;8775;8919		34.173	6.2903	1	9565500	+		63883	21590	42477	42495	72463;72464;72465	72463					0.06628261191804086
VRDKLVASN	9	Unmodified	_VRDKLVASN_					0	0	0			REV__nc|ENSG00000169607|Q8IYA6-3|CKAP2L	REV__nc|ENSG00000169607|Q8IYA6-3|CKAP2L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2903747558594	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.77696	1	8620	8620		31.53	2.3598	1	2850500	+		63884	21590	42477	42495	72466	72466					0.06628261191804086
VRDKRYRI	8	Unmodified	_VRDKRYRI_					0	0	0			REV__ENSG00000076826|ENST00000160298|CAMSAP3	REV__ENSG00000076826|ENST00000160298|CAMSAP3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.3325805664062	2	553.333082	1104.65161	0.80706	0.00044658	-1.9527	-0.0010805	-1.1457	-0.00063393	553.3318451739801	96.663	1.8533	97.067	96.582	98.436	0.40451					128	44	4	0	0	0	0.89494	1	11684	11684		37.159	4.3467	1	3116400	+		63885	16731	42478	42496	72467	72467					0.10347051448275124
VRDKVGKFFV	10	Unmodified	_VRDKVGKFFV_					0	0	0			REV__ENSG00000152661|ENST00000282561|GJA1	REV__ENSG00000152661|ENST00000282561|GJA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8560791015625	2	597.853316	1193.69208	0.93582	0.00055948	3.9067	0.0023357	4.8426	0.0028951	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.6116	1	9317	9317		49.442	3.4693	1	2638300	+		63886	20310	42479	42497	72468	72468					0.10297973048022868
VRDKVGKFFV	10	Unmodified	_VRDKVGKFFV_					0	0	0			REV__ENSG00000152661|ENST00000282561|GJA1	REV__ENSG00000152661|ENST00000282561|GJA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8556518554688	2	597.853316	1193.69208	0.82161	0.0004912	4.0289	0.0024087	4.8505	0.0028999	597.8554757648465	92.232	2.9288	92.39	90.434	93.363	0.15875					237	70	5	0	0	0	0.6116	1	9467	9467		49.442	2.9848	1	2486400	+		63887	20310	42479	42497	72469	72469					0.10297973048022868
VRDLPRHQL	9	Unmodified	_VRDLPRHQL_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3299560546875	2	567.330539	1132.64652	-0.51077	-0.00028978	-0.70581	-0.00040043	-1.2166	-0.0006902	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.76255	3	9024	9024;9144;9289		35.618	4.0885	1	11042000	+		63888	23556	42480	42498	72470;72471;72472	72470					0.08550747585650242
VRDLPRHQL	9	Unmodified	_VRDLPRHQL_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3300170898438	2	567.330539	1132.64652	-1.2006	-0.00068114	-0.16538	-9.3826E-05	-1.366	-0.00077496	567.3303588039595	92.579	6.1655	92.648	91.312	97.477	0.06987					527	145	6	0	0	0	0.76255	2	9513	9513;9729		35.618	5.1146	1	15673000	+		63889	23556	42480	42498	72473;72474	72473					0.08550747585650242
VRDLPRHQL	9	Unmodified	_VRDLPRHQL_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.329833984375	2	567.330539	1132.64652	1.8589	0.0010546	-3.1789	-0.0018035	-1.32	-0.00074889	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.76255	2	9766	9766;9874		35.618	5.1146	1	15439000	+		63890	23556	42480	42498	72475;72476	72475					0.08550747585650242
VRDLPRHQL	9	Unmodified	_VRDLPRHQL_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3297119140625	2	567.330539	1132.64652	1.497	0.00084932	-2.8559	-0.0016202	-1.3589	-0.00077092	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.76255	2	9647	9575;9647		35.618	5.3006	1	15259000	+		63891	23556	42480	42498	72477;72478	72478					0.08550747585650242
VRDLPRHQL	9	Unmodified	_VRDLPRHQL_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3299560546875	2	567.330539	1132.64652	0.4851	0.00027521	-1.8618	-0.0010563	-1.3767	-0.00078107	567.3293921087218	92.263	6.7318	92.485	91.301	98.033	0.22157					572	160	6	0	0	0	0.78983	2	9328	9244;9328		27.882	4.3595	1	18558000	+		63892	23556	42480	42498	72479;72480	72480					0.08550747585650242
VRDLPRHQL	9	Unmodified	_VRDLPRHQL_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.330078125	2	567.330539	1132.64652	-1.3957	-0.00079181	0.07479	4.2431E-05	-1.3209	-0.00074938	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.76255	1	9261	9261		35.618	5.3006	1	17338000	+		63893	23556	42480	42498	72481	72481					0.08550747585650242
VRDLPRHQL	9	Unmodified	_VRDLPRHQL_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3296508789062	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.7932	1	11161	11161		25.574	1.3713	1	6182600	+		63894	23556	42480	42498	72482	72482					0.08550747585650242
VRDLPRHQL	9	Unmodified	_VRDLPRHQL_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3299560546875	2	567.330539	1132.64652	0.27026	0.00015333	-1.2412	-0.00070419	-0.97098	-0.00055087	567.3297417652841	92.147	5.7538	92.61	91.681	97.435	0.46249					402	140	6	0	0	0	0.78983	1	11025	11025		27.882	1.1893	1	6007000	+		63895	23556	42480	42498	72483	72483					0.08550747585650242
VRDPKHVRN	9	Unmodified	_VRDPKHVRN_					0	0	0			REV__ENSG00000196950|ENST00000359634|SLC39A10	REV__ENSG00000196950|ENST00000359634|SLC39A10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8204345703125	2	560.820338	1119.62612	-0.54677	-0.00030664	-0.43561	-0.0002443	-0.98237	-0.00055094	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.73802	2	9105	9105;9129		37.812	3.8899	1	408930	+		63896	23184	42481	42499	72484;72485	72484					0.07109576925859074
VRDPKHVRN	9	Unmodified	_VRDPKHVRN_					0	0	0			REV__ENSG00000196950|ENST00000359634|SLC39A10	REV__ENSG00000196950|ENST00000359634|SLC39A10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.819580078125	2	560.820338	1119.62612	2.0312	0.0011391	-2.9645	-0.0016625	-0.93332	-0.00052343	560.8185510503406	92.547	2.8653	92.482	91.358	94.223	-0.06414					202	67	4	0	0	0	0.78124	1	9721	9721		30.318	3.6248	1	788180	+		63897	23184	42481	42499	72486	72486					0.07109576925859074
VRDPKHVRN	9	Unmodified	_VRDPKHVRN_					0	0	0			REV__ENSG00000196950|ENST00000359634|SLC39A10	REV__ENSG00000196950|ENST00000359634|SLC39A10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8201293945312	2	560.820338	1119.62612	1.394	0.00078178	-2.3679	-0.001328	-0.97394	-0.00054621	560.8189408405052	92.38	3.0704	92.425	91.102	94.172	0.045456					218	72	4	0	0	0	0.76764	1	9603	9603		34.173	5.023	1	723720	+		63898	23184	42481	42499	72487	72487					0.07109576925859074
VRDRRKVF	8	Unmodified	_VRDRRKVF_					0	0	0			REV__chr18:73332581-73357678|16|244.75|0.02|13.73|+|1|LINC02582,None|1	REV__chr18:73332581-73357678|16|244.75|0.02|13.73|+|1|LINC02582,None|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3267822265625	2	538.327799	1074.64105	-0.54037	-0.0002909	-1.0522	-0.00056642	-1.5925	-0.00085731	538.3271646052639	101.22	3.8034	101.22	100.55	104.36	0					314	93	6	0	0	0	0.884	1	10387	10387		33.516	1.5607	1	48186000	+		63899	15677	42482	42500	72488	72488					0.10671068793840277
VRDRRKVF	8	Unmodified	_VRDRRKVF_					0	0	0			REV__chr18:73332581-73357678|16|244.75|0.02|13.73|+|1|LINC02582,None|1	REV__chr18:73332581-73357678|16|244.75|0.02|13.73|+|1|LINC02582,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.32666015625	2	538.327799	1074.64105	1.246	0.00067076	-2.9722	-0.0016	-1.7262	-0.00092924	538.3261518581941	100.87	3.756	100.91	100.29	104.05	0.046356					330	90	6	0	0	0	0.90465	1	10798	10798		40.573	11.423	1	76567000	+		63900	15677	42482	42500	72489	72489					0.10671068793840277
VRDRRKVF	8	Unmodified	_VRDRRKVF_					0	0	0			REV__chr18:73332581-73357678|16|244.75|0.02|13.73|+|1|LINC02582,None|1	REV__chr18:73332581-73357678|16|244.75|0.02|13.73|+|1|LINC02582,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.3270874023438	2	538.327799	1074.64105	0.84014	0.00045227	-2.6234	-0.0014122	-1.7832	-0.00095997	538.326371026974	100.85	3.8483	100.99	100.33	104.18	0.14352					341	94	6	0	0	0	0.85277	1	10776	10776		25.45	1.2474	1	92159000	+		63901	15677	42482	42500	72490	72490					0.10671068793840277
VRDRRKVF	8	Unmodified	_VRDRRKVF_					0	0	0			REV__chr18:73332581-73357678|16|244.75|0.02|13.73|+|1|LINC02582,None|1	REV__chr18:73332581-73357678|16|244.75|0.02|13.73|+|1|LINC02582,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3270874023438	2	538.327799	1074.64105	-1.4902	-0.00080221	0.37298	0.00020079	-1.1172	-0.00060142	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.87922	1	12104	12104		31.955	0.42505	1	4041000	+		63902	15677	42482	42500	72491	72491					0.10671068793840277
VRDRRVPALI	10	Unmodified	_VRDRRVPALI_					0	0	0			REV__ENST00000483554.1_1_17:27043919-27044341:-|nuORF	REV__ENST00000483554.1_1_17:27043919-27044341:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.85595703125	2	597.875114	1193.73567	-0.56374	-0.00033704	1.515	0.0009058	0.9513	0.00056876	597.8764758228665	94.836	0.17139	94.904	94.797	94.968	0.068344					6	3	2	0	0	0	0.37624	1	9892	9892		25.574	1.3713	1	52339	+		63903	17748	42483	42501	72492	72492					0.14655582545174184
VRDSIFINL	9	Unmodified	_VRDSIFINL_					0	0	0			REV__ENST00000431520.5_1_2:213881736-213886386:-|nuORF	REV__ENST00000431520.5_1_2:213881736-213886386:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8065185546875	2	538.808574	1075.60259	-1.7158	-0.0009245	-1.7822	-0.00096029	-3.4981	-0.0018848	538.8077132058876	90.429	2.6922	90.899	89.762	92.454	0.47068					154	66	4	0	0	0	0.69624	1	10634	10634		40.778	6.6056	1	808590	+		63904	26619	42484	42502	72493	72493					0.06781718368642942
VRDSKLRD	8	Unmodified	_VRDSKLRD_					0	0	0		ENSG00000162669|ENST00000370425|HFM1	ENSG00000162669|ENST00000370425|HFM1	ENSG00000162669|ENST00000370425|HFM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.78045654296875	2	494.780348	987.546142	1.0619	0.0005254	-1.0199	-0.00050462	0.042	2.0781E-05	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.89043	1	8948	8948		35.618	7.736	1	657500			63905	5715	42485	42503	72494	72494					0.05187090532001548
VRDTRWGAGAE	11	Unmodified	_VRDTRWGAGAE_					0	0	0			REV__ENST00000514591.5_2_4:62067895-62248856:+|nuORF	REV__ENST00000514591.5_2_4:62067895-62248856:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.5392150878906	3	406.538904	1216.59488	0.13634	5.5428E-05	0.31887	0.00012963	0.45521	0.00018506	406.5390050089025	30.723	0.64022	30.748	30.447	31.087	0.025013					52	19	4	0	0	0	0.47591	1	1605	1605		53.597	2.4042	1	266510	+		63906	28017	42486	42504	72495	72495					-0.004750408989139032
VRDVRLFLSL	10	Unmodified	_VRDVRLFLSL_					0	0	0		chr2:189088772-189089872|16|51.81|0.05|9.92|-|1|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|33	chr2:189088772-189089872|16|51.81|0.05|9.92|-|1|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|33	chr2:189088772-189089872|16|51.81|0.05|9.92|-|1|TE_info:Tigger1,Tigger1_dup1785,TcMar-Tigger,DNA,donor,+,189089872,189091403|COL5A2,None|33	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2483825683594	3	406.583674	1216.72919	3.1806	0.0012932	-2.547	-0.0010356	0.6336	0.00025761	406.5823777958884	112.82	1.2516	112.85	112.71	113.96	0.028854					79	33	3	0	0	0	0.85441	1	12421	12421		20.837	3.3691	1	2434900			63907	322	42487	42505	72496	72496					0.12949644593800258
VRDVSVTGIGG	11	Unmodified	_VRDVSVTGIGG_					0	0	0			REV__ENST00000417549.1_1_13:28788954-28789521:+|nuORF	REV__ENST00000417549.1_1_13:28788954-28789521:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2929077148438	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.66929	1	8763	8763		36.447	3.6343	1	1390700	+		63908	26446	42488	42506	72497	72497					0.045079399836367884
VRDWILRQR	9	Unmodified	_VRDWILRQR_					0	0	0		nc|ENSG00000102854|Q13421-4|MSLN;ENSG00000102854|ENST00000545450|MSLN;nc|ENSG00000102854|Q13421|MSLN;nc|ENSG00000102854|Q13421-2|MSLN	nc|ENSG00000102854|Q13421-4|MSLN	nc|ENSG00000102854|Q13421-4|MSLN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.5911865234375	3	414.579034	1240.71527	0.21794	9.0352E-05	-3.1374	-0.0013007	-2.9194	-0.0012103	414.576530113482	18.275	0.41199	17.654	17.447	17.859	-0.62141					11	8	2	0	0	0	0.20789	1	359	359		60.118	10.652	1	26164			63909	2024	42489	42507	72498	72498					0.10454411885348236
VREERRVRP	9	Unmodified	_VREERRVRP_					0	0	0			REV__ENSG00000160161|ENST00000291495|CILP2	REV__ENSG00000160161|ENST00000291495|CILP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.85205078125	2	598.85217	1195.68979	1.0112	0.00060557	-0.85369	-0.00051123	0.15753	9.4335E-05	598.8514130191036	17.917	0.45971	17.434	17.192	17.652	-0.48256					23	8	4	0	0	0	0.72402	1	320	320		38.806	0.052534	1	272440	+		63910	20696	42490	42508	72499	72499					0.09976937362944227
VREERRVRP	9	Unmodified	_VREERRVRP_					0	0	0			REV__ENSG00000160161|ENST00000291495|CILP2	REV__ENSG00000160161|ENST00000291495|CILP2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	598.85217	1195.68979	1.0112	0.00060557	-0.85369	-0.00051123	0.15753	9.4335E-05	598.8514130191036	17.917	0.45971	17.434	17.192	17.652	-0.48256	-0.022363	-0.00069186	NaN	38.806	23	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272440	+		63911	20696	42490	42508							0.09976937362944227
VREERRVRP	9	Unmodified	_VREERRVRP_					0	0	0			REV__ENSG00000160161|ENST00000291495|CILP2	REV__ENSG00000160161|ENST00000291495|CILP2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	598.85217	1195.68979	0.025415	1.522E-05	0.11342	6.7923E-05	0.13884	8.3143E-05	598.8520336728849	18.1	0.36767	17.479	17.308	17.676	-0.62141	0.022363	0.00046645	NaN	38.806	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	253860	+		63912	20696	42490	42508							0.09976937362944227
VREGPFVKT	9	Unmodified	_VREGPFVKT_					0	0	0			REV__nc|ENSG00000159164|Q7L0J3-2|SV2A	REV__nc|ENSG00000159164|Q7L0J3-2|SV2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7930297851562	2	516.795466	1031.57638	-1.5008	-0.00077558	-2.6662	-0.0013779	-4.167	-0.0021535	516.7939962444509	86.285	2.6644	86.444	84.762	87.426	0.15851					129	61	3	0	0	0	0.7932	1	8497	8497		23.523	1.5628	1	241060	+		63913	20641	42491	42509	72500	72500					0.06185449197187154
VREHLLLF	8	Unmodified	_VREHLLLF_					0	0	0		nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;ENST00000484268.1_1_7:48352666-48443694:+|nuORF	nc|ENSG00000179869|Q86UQ4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8089599609375	2	513.808377	1025.6022	-0.38547	-0.00019806	1.7192	0.00088333	1.3337	0.00068527	513.8091570543913	49.825	2.4909	49.852	49.092	51.583	0.026459					148	70	4	0	0	0	0.89457	1	3872	3872		37.028	9.1462	1	1377600			63914	7298	42492	42510	72501	72501					0.09042343439477918
VREHLLLF	8	Unmodified	_VREHLLLF_					0	0	0		nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;ENST00000484268.1_1_7:48352666-48443694:+|nuORF	nc|ENSG00000179869|Q86UQ4|ABCA13	nc|ENSG00000179869|Q86UQ4|ABCA13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.30517578125	2	513.808377	1025.6022	-0.15906	-8.1728E-05	1.3381	0.00068753	1.179	0.0006058	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.87479	1	3591	3591		30.504	1.3541	1	1484700			63915	7298	42492	42510	72502	72502					0.09042343439477918
VREIFLKTG	9	Unmodified	_VREIFLKTG_					0	0	0		ENSG00000085832|ENST00000371733|EPS15	ENSG00000085832|ENST00000371733|EPS15	ENSG00000085832|ENST00000371733|EPS15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8170166015625	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.7932	1	8782	8782		25.574	3.6142	1	4022300			63916	1542	42493	42511	72503	72503					0.09498308748334239
VREKASQPG	9	Unmodified	_VREKASQPG_					0	0	0			REV__ENSG00000141858|ENST00000533683|SAMD1	REV__ENSG00000141858|ENST00000533683|SAMD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.2674560546875	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.69624	1	8415	8415		40.778	2.9666	1	1182200	+		63917	19711	42494	42512	72504	72504					0.033154016406683695
VREKASQPG	9	Unmodified	_VREKASQPG_					0	0	0			REV__ENSG00000141858|ENST00000533683|SAMD1	REV__ENSG00000141858|ENST00000533683|SAMD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	486.26702880859375	2	486.267073	970.519593	-1.6066	-0.00078124	1.8314	0.00089055	0.2248	0.00010932	486.26785103056733	86.238	4.0444	86.397	84.981	89.025	0.15851					302	94	4	0	0	0	0.76255	1	8554	8554		35.618	0	1	1531500	+		63918	19711	42494	42512	72505	72505					0.033154016406683695
VRELKAVI	8	Unmodified	_VRELKAVI_					0	0	0		ENST00000326756.3_1_4:10448084-10456505:-|nuORF	ENST00000326756.3_1_4:10448084-10456505:-|nuORF	ENST00000326756.3_1_4:10448084-10456505:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8005065917969	2	464.302927	926.591301	-1.1328	-0.00052597	-0.19017	-8.8298E-05	-1.323	-0.00061427	464.3028521488024	43.089	0.52806	43.095	42.778	43.306	0.0057487					21	14	2	0	0	0	0.4196	1	2963	2963		27.882	4.8398	1	120460			63919	10081	42495	42513	72506	72506					0.125069410651804
VRELVLAM	8	Unmodified	_VRELVLAM_					0	0	0			REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7778015136719	2	465.775688	929.536823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.822	1	80.762	80.262	81.262	-0.059692								0	0	0	0.29245	1	8135	8135		30.504	1.3541	1		+		63920	20170	42496	42514	72507	72507					0.06923605922111165
VRELVLAM	8	Unmodified	_VRELVLAM_					0	0	0			REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774963378906	2	465.775688	929.536823	-0.087401	-4.0709E-05	4.1075	0.0019132	4.0201	0.0018725	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.89043	1	8203	8203		35.618	6.4687	1	1330000	+		63921	20170	42496	42514	72508	72508					0.06923605922111165
VRELVLAM	8	Unmodified	_VRELVLAM_					0	0	0			REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	REV__nc|ENSG00000149476|Q3LXA3-2|TKFC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7773132324219	2	465.775688	929.536823	0.60386	0.00028126	3.3703	0.0015698	3.9742	0.0018511	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.85277	2	7775	7775;8015		25.45	0.94616	1	1082300	+		63922	20170	42496	42514	72509;72510	72509					0.06923605922111165
VREPLSLVVTH	11	Unmodified	_VREPLSLVVTH_					0	0	0			REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.24798583984375	3	417.24695	1248.71902	3.2844	0.0013704	-2.6159	-0.0010915	0.66849	0.00027892	417.2457501316996	103.39	0.51698	103.65	103.46	103.97	0.26524					28	11	3	0	0	0	0.69995	1	12623	12623		21.78	0	1	1811600	+		63923	27027	42497	42515	72511	72511					0.10461036868582596
VREPQRHLV	9	Unmodified	_VREPQRHLV_					0	0	0		ENST00000441493.6_1_22:18272311-18272575:-|nuORF	ENST00000441493.6_1_22:18272311-18272575:-|nuORF	ENST00000441493.6_1_22:18272311-18272575:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3298950195312	2	567.330539	1132.64652	-0.50942	-0.00028901	0.5149	0.00029212	0.0054817	3.1099E-06	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.78058	1	10846	10846		30.504	2.6214	1	5685000			63924	11786	42498	42516	72512	72512					0.08550747585650242
VREQRVTG	8	Unmodified	_VREQRVTG_					0	0	0		nc|ENSG00000114923|P48751-3|SLC4A3;ENSG00000114923|ENST00000358055|SLC4A3;nc|ENSG00000114923|P48751-2|SLC4A3;ENST00000425141.5_1_2:220498093-220506447:+|nuORF;nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;ENSG00000080493|ENST00000264485|SLC4A4;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4;nc|ENSG00000188687|Q9BY07-4|SLC4A5;nc|ENSG00000188687|Q9BY07-7|SLC4A5;nc|ENSG00000188687|Q9BY07-8|SLC4A5;ENST00000451608.2_1_2:74452054-74542150:-|nuORF;ENSG00000188687|ENST00000394019|SLC4A5;nc|ENSG00000188687|Q9BY07|SLC4A5;nc|ENSG00000188687|Q9BY07-2|SLC4A5	nc|ENSG00000114923|P48751-3|SLC4A3;nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;nc|ENSG00000188687|Q9BY07-4|SLC4A5	nc|ENSG00000114923|P48751-3|SLC4A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7673034667969	2	472.76724	943.519927	-0.41041	-0.00019403	0.54101	0.00025577	0.1306	6.1745E-05	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.88601	1	8600	8600		34.173	7.4796	1	590200			63925	14857;1441;15170	42499	42517	72513	72513					0.04590821360523023
VRERVPES	8	Unmodified	_VRERVPES_					0	0	0			REV__ENST00000506525.5_1_4:667343-667442:-|nuORF	REV__ENST00000506525.5_1_4:667343-667442:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.2671203613281	2	486.267073	970.519593	1.0382	0.00050483	-0.85752	-0.00041699	0.18065	8.7843E-05	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.89043	1	8939	8939		35.618	0	1	1819100	+		63926	27893	42500	42518	72514	72514					0.033154016406683695
VRFKAAKY	8	Unmodified	_VRFKAAKY_					0	0	0			REV__ENSG00000157219|ENST00000287907|HTR5A	REV__ENSG00000157219|ENST00000287907|HTR5A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958984375	2	491.795269	981.575986	-1.4502	-0.0007132	2.5925	0.001275	1.1423	0.00056177	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.86288	1	4801	4801		26.796	8.4717	1	1043600	+		63927	20536	42501	42519	72515	72515					0.08446074267988024
VRFKAAKY	8	Unmodified	_VRFKAAKY_					0	0	0			REV__ENSG00000157219|ENST00000287907|HTR5A	REV__ENSG00000157219|ENST00000287907|HTR5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958068847656	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.86288	1	4331	4331		26.796	1.222	1	1232600	+		63928	20536	42501	42519	72516	72516					0.08446074267988024
VRFLGYVPR	9	Unmodified	_VRFLGYVPR_					0	0	0			REV__nc|ENSG00000148384|Q9NRR6-2|INPP5E	REV__nc|ENSG00000148384|Q9NRR6-2|INPP5E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8297119140625	2	553.827101	1105.63965	1.7761	0.00098364	3.5243	0.0019519	5.3004	0.0029355	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.78058	1	9254	9254		30.504	1.3541	1	1628400	+		63929	20114	42502	42520	72517	72517					0.09105434705088555
VRFLGYVPR	9	Unmodified	_VRFLGYVPR_					0	0	0			REV__nc|ENSG00000148384|Q9NRR6-2|INPP5E	REV__nc|ENSG00000148384|Q9NRR6-2|INPP5E	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8303833007812	2	553.827101	1105.63965	1.198	0.00066348	4.1034	0.0022726	5.3014	0.002936	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.78058	1	9218	9218		30.504	1.3541	1	1689700	+		63930	20114	42502	42520	72518	72518					0.09105434705088555
VRFVRLTVF	9	Unmodified	_VRFVRLTVF_					0	0	0			REV__ENSG00000102057|ENST00000218176|KCND1;REV__ENSG00000184408|ENST00000331113|KCND2	REV__ENSG00000102057|ENST00000218176|KCND1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8531494140625	2	568.850576	1135.6866	0.5226	0.00029728	3.8523	0.0021914	4.3749	0.0024887	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.76255	1	10704	10704		35.618	0.41757	1	84800000	+		63931	17322;22674	42503	42521	72519	72519					0.1241829425623564
VRFVRLTVF	9	Unmodified	_VRFVRLTVF_					0	0	0			REV__ENSG00000102057|ENST00000218176|KCND1;REV__ENSG00000184408|ENST00000331113|KCND2	REV__ENSG00000102057|ENST00000218176|KCND1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.854248046875	2	568.850576	1135.6866	0.87009	0.00049495	3.5097	0.0019965	4.3798	0.0024914	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.78536	1	10900	10900		29.15	1.2673	1	78933000	+		63932	17322;22674	42503	42521	72520	72520					0.1241829425623564
VRFYWRRRRKV	11	Unmodified	_VRFYWRRRRKV_					0	0	0			REV__ENST00000181839.8_1_7:39989715-39990237:+|nuORF	REV__ENST00000181839.8_1_7:39989715-39990237:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.25872802734375	4	406.247018	1620.95897	-0.2775	-0.00011273	2.2797	0.00092613	2.0022	0.0008134	406.2478134817128	56.993	1.828	56.964	56.645	58.473	-0.028664					89	53	3	0	0	0	0.18372	1	5382	5382		1.4188	0	1	170400	+		63933	24087	42504	42522	72521	72521					0.17332496050062218
VRFYWRRRRKV	11	Unmodified	_VRFYWRRRRKV_					0	0	0			REV__ENST00000181839.8_1_7:39989715-39990237:+|nuORF	REV__ENST00000181839.8_1_7:39989715-39990237:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	405.2486877441406	4	406.247018	1620.95897	1.1704	0.00047548	-0.26977	-0.0001096	0.90064	0.00036588	406.49701816081773	23.815	0.12653	23.241	23.178	23.304	-0.57415					4	2	2	0	0	0	0.18372	1	1103	1103		0.3405	0	1	36211	+		63934	24087	42504	42522	72522	72522					0.17332496050062218
VRGAAGRVG	9	Unmodified	_VRGAAGRVG_					0	0	0			REV__ENST00000301399.11_1_19:52384040-52391179:-|nuORF	REV__ENST00000301399.11_1_19:52384040-52391179:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.75152587890625	2	421.751393	841.488233	-0.10002	-4.2183E-05	0.32598	0.00013748	0.22596	9.5298E-05	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.78058	1	7686	7686		30.504	0	1	579450	+		63935	24763	42505	42523	72523	72523					0.06114873397245901
VRGAAGVRG	9	Unmodified	_VRGAAGVRG_					0	0	0		nc|ENSG00000148584|Q9NQ94-3|A1CF;ENSG00000148584|ENST00000373997|A1CF;nc|ENSG00000148584|Q9NQ94-4|A1CF	nc|ENSG00000148584|Q9NQ94-3|A1CF	nc|ENSG00000148584|Q9NQ94-3|A1CF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.7513122558594	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.7932	1	7478	7478		23.042	0	1	532850			63936	4969	42506	42524	72524	72524					0.06114873397245901
VRGALRRPILS	11	Unmodified	_VRGALRRPILS_					0	0	0			REV__ENST00000406172.6_1_22:19708391-19710534:+|nuORF	REV__ENST00000406172.6_1_22:19708391-19710534:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.26519775390625	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.189	1	41.148	40.648	41.648	-0.04081								0	0	0	0.56276	1	3080	3080		21.032	1.7696	1		+		63937	26303	42507	42525	72525	72525					0.16895557953557727
VRGASGGALPK	11	Unmodified	_VRGASGGALPK_					0	0	0		nc|ENSG00000058056|Q92995-2|USP13;ENSG00000058056|ENST00000263966|USP13	nc|ENSG00000058056|Q92995-2|USP13	nc|ENSG00000058056|Q92995-2|USP13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.79901123046875	2	506.79854	1011.58253	0.2762	0.00013998	4.2956	0.002177	4.5718	0.002317	506.80060604425614	44.566	4.0966	44.543	42.21	46.306	-0.023079					193	97	3	0	0	0	0.66929	3	3392	3392;3403;3414		36.447	3.6343	1	416790			63938	1041	42508	42526	72526;72527;72528	72526					0.07719967428727159
VRGAVKGVTT	10	Unmodified	_VRGAVKGVTT_					0	0	0			REV__ENSG00000121057|ENST00000337714|AKAP1	REV__ENSG00000121057|ENST00000337714|AKAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.3017272949219	2	494.300916	986.587279	-0.90607	-0.00044787	1.0812	0.00053443	0.17511	8.6555E-05	494.3015193767554	16.639	0.57203	16.557	16.369	16.941	-0.0821					38	24	2	0	0	0	0.85694	1	150	150		21.96	0	1	32822	+		63939	18443	42509	42527	72529	72529					0.09344851571484014
VRGCATASM	9	Carbamidomethyl (C),Oxidation (M)	_VRGC(Carbamidomethyl (C))ATASM(Oxidation (M))_	VRGC(1)ATASM	VRGCATASM(1)	VRGC(48)ATASM	VRGCATASM(48)	0	1	1		ENSG00000011422|ENST00000340093|PLAUR;nc|ENSG00000011422|Q03405-3|PLAUR	ENSG00000011422|ENST00000340093|PLAUR	ENSG00000011422|ENST00000340093|PLAUR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.7184753417969	2	484.718044	967.421535	1.8339	0.00088894	-1.8419	-0.00089281	-0.0079839	-3.8699E-06	484.717227769282	100.08	1.4855	100.42	100.11	101.59	0.3459					119	38	5	0	0	0	0.58151	1	12164	12164		47.916	8.8941	1	10268000			63940	791	42510	42528	72530	72530	8	10			-0.06347866271198654
VRGEGAAAPGG	11	Unmodified	_VRGEGAAAPGG_					0	0	0			REV__nc|ENSG00000178803|P86434|ADORA2A-AS1	REV__nc|ENSG00000178803|P86434|ADORA2A-AS1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	471.2418518066406	2	471.243598	940.472643	-1.1193	-0.00052749	1.6336	0.00076982	0.51424	0.00024233	471.2441988506581	85.918	3.203	85.918	84.395	87.598	0					120	73	3	0	0	0	0.72739	1	8114	8114		27.047	1.5971	1	202290	+		63941	30061	42511	42529	72531	72531					2.5420895212846517E-05
VRGGARLP	8	Unmodified	_VRGGARLP_					0	0	0		ENST00000582766.5_1_17:43884387-43907895:+|nuORF	ENST00000582766.5_1_17:43884387-43907895:+|nuORF	ENST00000582766.5_1_17:43884387-43907895:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76678466796875	2	413.256311	824.49807	0.26709	0.00011038	3.2589	0.0013468	3.526	0.0014571	413.2596078073726	48.938	0.67792	48.976	48.666	49.344	0.037735					18	15	2	0	0	0	0.4196	1	3762	3762		42.474	14.22	1	39061			63942	14116	42512	42530	72532	72532					0.07880061402613592
VRGGDRLGA	9	Unmodified	_VRGGDRLGA_					0	0	0		ENST00000481799.5_2_9:124218117-124262303:-|nuORF	ENST00000481799.5_2_9:124218117-124262303:-|nuORF	ENST00000481799.5_2_9:124218117-124262303:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7543640136719	2	450.754133	899.493713	0.36741	0.00016561	0.13246	5.9707E-05	0.49987	0.00022532	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.76764	1	8226	8226		34.173	0	1	394230			63943	12469	42513	42531	72533	72533					0.03994552189033129
VRGGLGGLLR	10	Unmodified	_VRGGLGGLLR_					0	0	0			REV__nc|ENSG00000126467|Q9UJT2-2|TSKS	REV__nc|ENSG00000126467|Q9UJT2-2|TSKS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.2137145996094	2	499.3169	996.619247	1.0531	0.00052581	1.4007	0.00069942	2.4538	0.0012252	499.317547895224	100.41	0.44283	100.74	100.48	100.92	0.33295					15	10	2	0	0	0	0.37624	1	12140	12140		42.396	0	1	78080	+		63944	18703	42514	42532	72534	72534					0.12080264045278
VRGGPGRL	8	Unmodified	_VRGGPGRL_					0	0	0			REV__ENST00000601667.5_1_19:52217262-52219608:-|nuORF	REV__ENST00000601667.5_1_19:52217262-52219608:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.248779296875	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.49	1	117.46	116.96	117.96	-0.02433								0	0	0	0.29631	1	13005	13005		25.45	3.7478	1		+		63945	29322	42515	42533	72535	72535					0.06959774885569914
VRGGPGRLKS	10	Unmodified	_VRGGPGRLKS_					0	0	0			REV__ENST00000601667.5_1_19:52217262-52219608:-|nuORF	REV__ENST00000601667.5_1_19:52217262-52219608:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.8089599609375	2	513.811982	1025.60941	-1.3833	-0.00071076	-4.3654	-0.002243	-5.7487	-0.0029537	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.8651	1	4266	4266		25.574	0	1	1148600	+		63946	29322	42516	42534	72536	72536					0.09763076039894258
VRGGRAESL	9	Unmodified	_VRGGRAESL_					0	0	0			REV__ENST00000525340.5_1_11:62340999-62341314:-|nuORF	REV__ENST00000525340.5_1_11:62340999-62341314:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7676086425781	2	472.76724	943.519927	-0.93597	-0.0004425	0.72881	0.00034456	-0.20716	-9.7939E-05	472.7674891607628	81.886	2.6588	82.031	80.209	82.868	0.14512					108	66	2	0	0	0	0.77244	1	7731	7731		32.812	3.6629	1	189560	+		63947	28180	42517	42535	72537	72537					0.045908213605116543
VRGILQWRGT	10	Unmodified	_VRGILQWRGT_					0	0	0		nc|ENSG00000178188|Q9NRF2-2|SH2B1;nc|ENSG00000178188|Q9NRF2-3|SH2B1;ENSG00000178188|ENST00000684370|SH2B1	nc|ENSG00000178188|Q9NRF2-2|SH2B1	nc|ENSG00000178188|Q9NRF2-2|SH2B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	593.344482421875	2	593.346189	1184.67783	-0.22642	-0.00013434	-2.3776	-0.0014107	-2.604	-0.0015451	593.3446713104415	103.73	2.3003	103.73	103.29	105.59	0					144	55	4	0	0	0	0.86272	1	10718	10718		24.519	1.9395	1	1751500			63948	7191	42518	42536	72538	72538					0.09287320619728234
VRGILQWRGT	10	Unmodified	_VRGILQWRGT_					0	0	0		nc|ENSG00000178188|Q9NRF2-2|SH2B1;nc|ENSG00000178188|Q9NRF2-3|SH2B1;ENSG00000178188|ENST00000684370|SH2B1	nc|ENSG00000178188|Q9NRF2-2|SH2B1	nc|ENSG00000178188|Q9NRF2-2|SH2B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.3414306640625	2	593.346189	1184.67783	-0.64573	-0.00038314	-2.3039	-0.001367	-2.9496	-0.0017502	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.86471	1	11325	11325		30.318	4.7437	1	2296600			63949	7191	42518	42536	72539	72539					0.09287320619728234
VRGKARLPPDV	11	Unmodified	_VRGKARLPPDV_					0	0	0		nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	nc|ENSG00000253729|P78527-2|PRKDC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3651733398438	2	604.367121	1206.71969	2.3603	0.0014265	-3.147	-0.0019019	-0.78675	-0.00047549	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.77061	1	12874	12874		17.468	0.75062	1	5984800			63950	8866	42519	42537	72540	72540					0.12459876308253115
VRGKELKN	8	Unmodified	_VRGKELKN_					0	0	0			REV__ENST00000557484.5_1_15:27113920-27122818:+|nuORF	REV__ENST00000557484.5_1_15:27113920-27122818:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.2877502441406	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.89494	1	10174	10174		37.159	0	1	48574000	+		63951	28718	42520	42538	72541	72541					0.08748582399982752
VRGKFEPSL	9	Unmodified	_VRGKFEPSL_					0	0	0			REV__ENSG00000215182|ENST00000621226|MUC5AC	REV__ENSG00000215182|ENST00000621226|MUC5AC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.7930908203125	2	516.795466	1031.57638	-1.5008	-0.00077558	-2.6662	-0.0013779	-4.167	-0.0021535	516.7939962444509	86.285	2.6644	86.444	84.762	87.426	0.15851					129	61	3	0	0	0	0.7932	1	8413	8413		20.947	0.4651	1	241060	+		63952	23677	42521	42539	72542	72542					0.06185449197187154
VRGKRKKVM	9	Unmodified	_VRGKRKKVM_					0	0	0			REV__ENSG00000137815|ENST00000389629|RTF1	REV__ENSG00000137815|ENST00000389629|RTF1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	551.3612670898438	2	551.355502	1100.69645	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.649	1	18.625	18.125	19.125	-0.024035								0	0	0	0.33676	1	349	349		18.324	6.1176	1		+		63953	19411	42522	42540	72543	72543					0.1501315898995017
VRGKTNASIS	10	Unmodified	_VRGKTNASIS_					0	0	0			REV__ENST00000399510.6_3_17:7122554-7122863:-|nuORF	REV__ENST00000399510.6_3_17:7122554-7122863:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7929077148438	2	516.793455	1031.57236	0.68918	0.00035616	-0.86967	-0.00044944	-0.18049	-9.3276E-05	516.7928457935418	86.219	2.6893	86.368	84.865	87.554	0.14902					141	62	3	0	0	0	0.86471	1	8544	8544		30.318	6.115	1	296930	+		63954	26228	42523	42541	72544	72544					0.057833597034687045
VRGLGGVKAS	10	Unmodified	_VRGLGGVKAS_					0	0	0			REV__ENST00000464538.1_1_2:27428216-27429031:-|nuORF	REV__ENST00000464538.1_1_2:27428216-27429031:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2879333496094	2	472.287808	942.561064	0.72641	0.00034307	-0.97867	-0.00046221	-0.25226	-0.00011914	472.28728396503055	95.126	4.2043	95.289	94.617	98.821	0.16308					296	98	6	0	0	0	0.86763	1	10149	10149		26.693	1.2427	1	48696000	+		63955	19435	42524	42542	72545	72545					0.0874858239999412
VRGMGETPIL	10	Unmodified	_VRGMGETPIL_					0	0	0		ENSG00000084453|ENST00000683939|SLCO1A2;ENST00000463718.5_1_12:21428225-21457481:-|nuORF;nc|ENSG00000084453|P46721-2|SLCO1A2	ENSG00000084453|ENST00000683939|SLCO1A2	ENSG00000084453|ENST00000683939|SLCO1A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.7966918945312	2	536.794609	1071.57467	-0.061015	-3.2752E-05	2.8625	0.0015366	2.8015	0.0015038	536.796082196528	16.636	0.31153	16.026	15.866	16.177	-0.6107					10	6	2	0	0	0	0.86718	1	157	157		27.882	3.3631	1	126730			63956	1517	42525	42543	72546	72546					0.0417407211691625
VRGPSGPR	8	Unmodified	_VRGPSGPR_					0	0	0		ENST00000481424.5_1_7:99214612-99216222:+|nuORF	ENST00000481424.5_1_7:99214612-99216222:+|nuORF	ENST00000481424.5_1_7:99214612-99216222:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	413.2372741699219	2	413.238119	824.461684	-0.18778	-7.7597E-05	0.53165	0.0002197	0.34387	0.0001421	413.2382651910014	77.448	7.5201	77.5	73.916	81.436	0.052696					516	264	2	0	0	0	0.884	1	7238	7238		33.516	1.5607	1	1747900			63957	12458	42526	42544	72547	72547					0.04243184505901354
VRGPSGPR	8	Unmodified	_VRGPSGPR_					0	0	0		ENST00000481424.5_1_7:99214612-99216222:+|nuORF	ENST00000481424.5_1_7:99214612-99216222:+|nuORF	ENST00000481424.5_1_7:99214612-99216222:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2374572753906	2	413.238119	824.461684	2.3964	0.00099028	-1.9371	-0.00080048	0.4593	0.0001898	413.2371800777938	77.269	9.1409	77.318	73.708	82.849	0.04969					676	296	3	0	0	0	0.87922	1	7315	7315		31.955	0	1	2127000			63958	12458	42526	42544	72548	72548					0.04243184505901354
VRGRLGGPSK	10	Unmodified	_VRGRLGGPSK_					0	0	0		ENST00000401088.8_1_1:16721789-16721960:+|nuORF	ENST00000401088.8_1_1:16721789-16721960:+|nuORF	ENST00000401088.8_1_1:16721789-16721960:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	514.3096923828125	2	513.811982	1025.60941	-1.3833	-0.00071076	-4.3654	-0.002243	-5.7487	-0.0029537	513.8096175880858	52.408	2.1299	52.408	51.553	53.683	0					143	59	3	0	0	0	0.8651	1	4202	4202		25.574	1.3713	1	1148600			63959	11235	42527	42545	72549	72549					0.09763076039894258
VRGRPLGG	8	Unmodified	_VRGRPLGG_					0	0	0			REV__ENST00000377060.7_1_2:97482238-97482397:+|nuORF	REV__ENST00000377060.7_1_2:97482238-97482397:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.248291015625	2	406.248486	810.48242	-0.18704	-7.5983E-05	0.46265	0.00018795	0.27561	0.00011197	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.82464	2	9240	8927;9240		28.254	6.5519	1	50007000	+		63960	25852	42528	42546	72550;72551	72551					0.06959774885569914
VRGSWVVAA	9	Unmodified	_VRGSWVVAA_					0	0	0		ENST00000481304.5_1_X:153668486-153668693:+|nuORF	ENST00000481304.5_1_X:153668486-153668693:+|nuORF	ENST00000481304.5_1_X:153668486-153668693:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.76708984375	2	472.769252	943.52395	-0.41041	-0.00019403	-3.7134	-0.0017556	-4.1238	-0.0019496	472.76742157689324	83.769	4.8313	83.828	82.602	87.433	0.059258					237	111	3	0	0	0	0.78536	1	8577	8577		29.15	2.3535	1	590200			63961	12456	42529	42547	72552	72552					0.04992910854218735
VRGVLGKP	8	Unmodified	_VRGVLGKP_					0	0	0			REV__ENST00000533086.5_1_19:15228578-15234387:-|nuORF	REV__ENST00000533086.5_1_19:15228578-15234387:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.9324645996094	2	413.268887	824.523222	0.23838	9.8515E-05	-1.824	-0.00075379	-1.5856	-0.00065527	413.2679307529505	46.099	1.7717	46.141	44.815	46.586	0.042599					72	46	2	0	0	0	0.4196	1	3256	3256		25.45	18.715	1	217310	+		63962	17508	42530	42548	72553	72553					0.1039411620519104
VRGWSLVP	8	Unmodified	_VRGWSLVP_					0	0	0			REV__ENST00000492390.5_1_1:1636243-1639660:-|nuORF	REV__ENST00000492390.5_1_1:1636243-1639660:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2626953125	2	457.266345	912.518136	-1.2409	-0.00056743	-3.1044	-0.0014196	-4.3454	-0.001987	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.90465	1	8023	8023		40.573	1.7665	1	2957200	+		63963	27313	42531	42549	72554	72554					0.058378123425768536
VRHIATQLKEA	11	Unmodified	_VRHIATQLKEA_					0	0	0			REV__nc|ENSG00000164347|Q969S9-5|GFM2	REV__nc|ENSG00000164347|Q969S9-5|GFM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.58148193359375	3	422.582333	1264.72517	-1.733	-0.00073233	0.89401	0.00037779	-0.83897	-0.00035453	422.5826240153895	97.352	3.8291	97.583	96.825	100.65	0.23103					216	89	4	0	0	0	0.72918	1	10087	10087		23.378	0	1	506650	+		63964	21075	42532	42550	72555	72555					0.10339555100085818
VRHKTETT	8	Unmodified	_VRHKTETT_					0	0	0			REV__ENST00000450765.5_1_2:219523811-219524298:-|nuORF	REV__ENST00000450765.5_1_2:219523811-219524298:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	486.26690673828125	2	486.267073	970.519593	-1.0289	-0.00050034	1.3286	0.00064608	0.29971	0.00014574	486.2676221568614	86.378	4.859	86.378	85.271	90.13	0					314	112	4	0	0	0	0.89962	1	8307	8307		38.806	6.8513	1	1182200	+		63965	26874	42533	42551	72556	72556					0.03315401640657001
VRHKTETT	8	Unmodified	_VRHKTETT_					0	0	0			REV__ENST00000450765.5_1_2:219523811-219524298:-|nuORF	REV__ENST00000450765.5_1_2:219523811-219524298:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	486.2671203613281	2	486.267073	970.519593	1.0382	0.00050483	-0.85752	-0.00041699	0.18065	8.7843E-05	486.26655907255986	86.314	4.0722	86.241	84.975	89.047	-0.073761					338	95	5	0	0	0	0.90465	1	8915	8915		40.573	5.3719	1	1819100	+		63966	26874	42533	42551	72557	72557					0.03315401640657001
VRHKTETT	8	Unmodified	_VRHKTETT_					0	0	0			REV__ENST00000450765.5_1_2:219523811-219524298:-|nuORF	REV__ENST00000450765.5_1_2:219523811-219524298:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.26715087890625	2	486.267073	970.519593	-1.0938	-0.00053186	1.2715	0.00061828	0.17773	8.6424E-05	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.91005	1	8917	8917		42.474	3.2216	1	1852700	+		63967	26874	42533	42551	72558	72558					0.03315401640657001
VRHLLGAF	8	Unmodified	_VRHLLGAF_					0	0	0		nc|ENSG00000006555|Q5TAA0-2|TTC22;ENSG00000006555|ENST00000371276|TTC22	nc|ENSG00000006555|Q5TAA0-2|TTC22	nc|ENSG00000006555|Q5TAA0-2|TTC22	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7929992675781	2	456.774337	911.534121	0.038062	1.7386E-05	4.1772	0.001908	4.2152	0.0019254	456.77486780389904	37.587	0.1604	37.529	37.406	37.566	-0.057915					7	4	2	0	0	0	0.4196	1	2158	2158		21.702	0	1	17716			63968	14733	42534	42552	72559	72559					0.07481518579470503
VRHLVPLWVM	10	Unmodified	_VRHLVPLWVM_					0	0	0			REV__ENSG00000152818|ENST00000367545|UTRN;REV__nc|ENSG00000198947|P11532-4|DMD	REV__ENSG00000152818|ENST00000367545|UTRN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.24822998046875	3	417.246116	1248.71652	2.3362	0.00097477	0.47319	0.00019744	2.8094	0.0011722	417.24614942996294	103.4	0.79668	103.62	103.17	103.96	0.22556					40	19	3	0	0	0	0.85939	1	12561	12561		16.007	0	1	988660	+		63969	20318;23425	42535	42553	72560	72560					0.10210909929878653
VRHNWKKRRWR	11	Unmodified	_VRHNWKKRRWR_					0	0	0			REV__chr7:7639110-7640320|13|38.23|0.7|5.76|-|1|None,RPA3|2	REV__chr7:7639110-7640320|13|38.23|0.7|5.76|-|1|None,RPA3|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.9840698242188	3	541.318548	1620.93381	0.00087598	4.7419E-07	2.6668	0.0014436	2.6677	0.0014441	541.320008692229	16.242	0.26325	15.754	15.65	15.913	-0.48718					8	5	2	0	0	0	0.18343	1	104	104		8.7993	2.1397	1	53053	+		63970	15911	42536	42554	72561	72561					0.14818441247507508
VRHQADPL	8	Unmodified	_VRHQADPL_					0	0	0		ENST00000444376.7_3_1:245027661-245027838:-|nuORF	ENST00000444376.7_3_1:245027661-245027838:-|nuORF	ENST00000444376.7_3_1:245027661-245027838:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.25555419921875	2	468.256508	934.498464	-0.24701	-0.00011566	-3.3298	-0.0015592	-3.5768	-0.0016749	468.25479155810393	81.956	2.8945	82.014	80.909	83.803	0.057808					126	66	2	0	0	0	0.89494	1	8104	8104		37.159	4.3467	1	193290			63971	11812	42537	42555	72562	72562					0.0285943633180068
VRHRGIHTG	9	Unmodified	_VRHRGIHTG_					0	0	0		ENSG00000197937|ENST00000334197|ZNF347;nc|ENSG00000197937|Q96SE7-2|ZNF347	ENSG00000197937|ENST00000334197|ZNF347	ENSG00000197937|ENST00000334197|ZNF347	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7929077148438	2	516.794124	1031.57369	1.2878	0.00066555	-2.8018	-0.001448	-1.514	-0.00078242	516.7925520505679	86.358	2.7525	86.284	84.67	87.423	-0.073761					114	63	3	0	0	0	0.77244	1	9014	9014		32.812	2.3088	1	275120			63972	8215	42538	42556	72563	72563					0.05917038582879286
VRHRKIPSN	9	Unmodified	_VRHRKIPSN_					0	0	0			REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|136|3|sense	REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|136|3|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8302612304688	2	553.830706	1105.64686	0.76565	0.00042404	-1.6754	-0.00092791	-0.9098	-0.00050387	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.78058	1	9111	9111		30.504	1.3336	1	6029400	+		63973	29482	42539	42557	72564	72564					0.09826167305527633
VRHRKIPSN	9	Unmodified	_VRHRKIPSN_					0	0	0			REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|136|3|sense	REV__L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|136|3|sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8302001953125	2	553.830706	1105.64686	-1.2274	-0.00067979	0.095928	5.3128E-05	-1.1315	-0.00062666	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.7932	1	10327	10327		23.042	0	1	1825600	+		63974	29482	42539	42557	72565	72565					0.09826167305527633
VRHSGGLN	8	Unmodified	_VRHSGGLN_					0	0	0		ENSG00000165556|ENST00000381020|CDX2	ENSG00000165556|ENST00000381020|CDX2	ENSG00000165556|ENST00000381020|CDX2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2269287109375	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.89962	1	7145	7145		38.806	1.647	1	419890			63975	6095	42540	42558	72566	72566					0.015265941262327942
VRHSGGLN	8	Unmodified	_VRHSGGLN_					0	0	0		ENSG00000165556|ENST00000381020|CDX2	ENSG00000165556|ENST00000381020|CDX2	ENSG00000165556|ENST00000381020|CDX2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2270812988281	2	420.227751	838.440949	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.081	1	82.236	81.736	82.736	0.15474								0	0	0	0.29245	1	7884	7884		30.504	0.6621	1				63976	6095	42540	42558	72567	72567					0.015265941262327942
VRHVINSA	8	Unmodified	_VRHVINSA_					0	0	0		nc|ENSG00000179832|Q8NDA8-2|MROH1;ENST00000532255.5_1_8:145218705-145305309:+|nuORF;ENSG00000179832|ENST00000326134|MROH1;ENST00000527071.1_1_8:145254030-145268916:+|nuORF;nc|ENSG00000179832|Q8NDA8-6|MROH1;nc|ENSG00000179832|Q8NDA8-4|MROH1;nc|ENSG00000179832|Q8NDA8-7|MROH1	nc|ENSG00000179832|Q8NDA8-2|MROH1	nc|ENSG00000179832|Q8NDA8-2|MROH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.2588195800781	2	448.259051	894.503549	0.65386	0.0002931	-0.54104	-0.00024253	0.11282	5.0571E-05	448.25866214707224	89.921	4.4379	90.073	86.786	91.224	0.1519					231	105	5	0	0	0	0.89494	1	9059	9059		37.159	6.6555	1	2709200			63977	7295	42541	42559	72568	72568					0.05207740194430244
VRIERLSA	8	Unmodified	_VRIERLSA_					0	0	0			REV__chr1:35079442-35095819|58|14.1|0.68|4.38|+|2|ZMYM1,ZMYM1|1	REV__chr1:35079442-35095819|58|14.1|0.68|4.38|+|2|ZMYM1,ZMYM1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.28765869140625	2	472.287808	942.561064	-0.026744	-1.2631E-05	-0.24773	-0.000117	-0.27447	-0.00012963	472.28762278140846	95.167	4.1898	95.214	94.619	98.809	0.046989					383	97	6	0	0	0	0.87479	1	10271	10271		30.504	4.9296	1	48574000	+		63978	15449	42542	42560	72569	72569					0.0874858239999412
VRIERLSA	8	Unmodified	_VRIERLSA_					0	0	0			REV__chr1:35079442-35095819|58|14.1|0.68|4.38|+|2|ZMYM1,ZMYM1|1	REV__chr1:35079442-35095819|58|14.1|0.68|4.38|+|2|ZMYM1,ZMYM1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.2856750488281	2	472.287808	942.561064	0.77569	0.00036635	-0.63395	-0.00029941	0.14174	6.6944E-05	472.2874576904681	103.4	0.90387	103.52	103.17	104.08	0.12622					49	22	3	0	0	0	0.89043	1	10976	10976		35.618	0.41757	1	543010	+		63979	15449	42542	42560	72570	72570					0.0874858239999412
VRIGLIQGNRV	11	Unmodified	_VRIGLIQGNRV_					0	0	0		ENST00000547581.5_1_12:48529049-48539488:+|nuORF;nc|ENSG00000152556|P08237-2|PFKM;ENSG00000152556|ENST00000359794|PFKM;nc|ENSG00000152556|P08237-3|PFKM	ENST00000547581.5_1_12:48529049-48539488:+|nuORF	ENST00000547581.5_1_12:48529049-48539488:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.88037109375	2	612.880396	1223.74624	3.0905	0.0018941	-4.4816	-0.0027467	-1.3912	-0.00085262	612.8774407741583	104.71	3.9916	104.67	103.85	107.84	-0.04039					302	94	6	0	0	0	0.69995	1	11663	11663		31.53	2.3598	1	48609000			63980	5182	42543	42561	72571	72571					0.14331565199586294
VRIIGNKKAIE	11	Unmodified	_VRIIGNKKAIE_					0	0	0		ENSG00000164902|ENST00000297540|PHAX	ENSG00000164902|ENST00000297540|PHAX	ENSG00000164902|ENST00000297540|PHAX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	414.260986328125	3	414.262712	1239.76631	0.47723	0.0001977	-2.529	-0.0010477	-2.0518	-0.00084997	414.2615838567143	17.923	0.47268	17.899	17.702	18.175	-0.024035					56	24	3	0	0	0	0.74022	1	279	279		24.232	0.85391	1	585970			63981	6021	42544	42562	72572	72572					0.15601316139532173
VRILVPKQTQA	11	Unmodified	_VRILVPKQTQA_					0	0	0		ENST00000369285.7_2_10:115922747-115922840:-|nuORF	ENST00000369285.7_2_10:115922747-115922840:-|nuORF	ENST00000369285.7_2_10:115922747-115922840:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.8894653320312	2	626.890429	1251.76631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.13	1	108.09	107.59	108.59	-0.042404								0	0	0	0.56276	1	11785	11785		23.523	0	1				63982	10615	42545	42563	72573	72573					0.15049316139561597
VRIPAKPPAAM	11	Unmodified	_VRIPAKPPAAM_					0	0	0			REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.843017578125	2	575.841894	1149.66923	-0.49921	-0.00028747	2.3914	0.0013771	1.8922	0.0010896	575.8431596374105	90.712	2.8869	90.712	88.874	91.761	0					214	67	4	0	0	0	0.64498	1	8979	8979		39.253	4.1008	1	1518700	+		63983	22710	42546	42564	72574	72574					0.10038630658914371
VRIPAKPPAAM	11	Unmodified	_VRIPAKPPAAM_					0	0	0			REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.84326171875	2	575.841894	1149.66923	-0.99797	-0.00057467	2.8055	0.0016155	1.8076	0.0010409	575.8433464319414	90.672	2.8412	90.741	88.754	91.595	0.069328					215	67	4	0	0	0	0.63176	1	9235	9235		40.778	5.6261	1	1885000	+		63984	22710	42546	42564	72575	72575					0.10038630658914371
VRIPAKPPAAM	11	Unmodified	_VRIPAKPPAAM_					0	0	0			REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.842529296875	2	575.841894	1149.66923	1.9391	0.0011166	-0.2647	-0.00015242	1.6745	0.00096422	575.8416234116534	92.557	3.5759	92.493	91.439	95.015	-0.064148					333	84	5	0	0	0	0.72918	2	9690	9690;9796		26.693	2.4902	1	5986700	+		63985	22710	42546	42564	72576;72577	72576					0.10038630658914371
VRIPAKPPAAM	11	Unmodified	_VRIPAKPPAAM_					0	0	0			REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.843017578125	2	575.841894	1149.66923	0.91732	0.00052823	0.78637	0.00045282	1.7037	0.00098106	575.8422041008691	92.362	5.2253	92.408	91.342	96.567	0.045456					381	123	5	0	0	0	0.63176	4	9605	9605;9653;9738;9836		40.778	6.6056	1	5468500	+		63986	22710	42546	42564	72578;72579;72580;72581	72578					0.10038630658914371
VRIPAKPPAAM	11	Unmodified	_VRIPAKPPAAM_					0	0	0			REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8430786132812	2	575.841894	1149.66923	0.61103	0.00035186	1.1234	0.0006469	1.7344	0.00099876	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.75495	1	9504	9504		20.947	0.91646	1	6623700	+		63987	22710	42546	42564	72582	72582					0.10038630658914371
VRIPAKPPAAM	11	Unmodified	_VRIPAKPPAAM_					0	0	0			REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	REV__nc|ENSG00000269502|Q5HYR2-2|DMRTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.84326171875	2	575.841894	1149.66923	0.80402	0.00046299	0.89767	0.00051691	1.7017	0.0009799	575.8422960799514	92.344	5.3524	92.503	91.391	96.744	0.15875					410	127	5	0	0	0	0.69995	1	9301	9301		31.53	7.3271	1	6947200	+		63988	22710	42546	42564	72583	72583					0.10038630658914371
VRIRIGYKDYD	11	Unmodified	_VRIRIGYKDYD_					0	0	0			REV__ENSG00000198887|ENST00000361138|SMC5	REV__ENSG00000198887|ENST00000361138|SMC5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.5891418457031	3	466.589376	1396.7463	-0.11305	-5.2749E-05	-0.066105	-3.0844E-05	-0.17916	-8.3592E-05	466.589270448406	58.418	0.72167	58.404	58.111	58.833	-0.013641					61	25	4	0	0	0	0.74022	1	5336	5336		24.232	0	1	239310	+		63989	23404	42547	42565	72584	72584					0.06379520408950157
VRIRPSGG	8	Unmodified	_VRIRPSGG_					0	0	0			REV__ENST00000554544.5_1_14:94547747-94568847:+|nuORF	REV__ENST00000554544.5_1_14:94547747-94568847:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.2547607421875	2	421.253769	840.492984	-1.7494	-0.00073696	2.1586	0.00090931	0.40915	0.00017236	421.25452750849325	84.126	1.3912	84.264	83.786	85.177	0.13811					78	31	3	0	0	0	0.79929	1	8179	8179		18.324	0	1	553140	+		63990	28665	42548	42566	72585	72585					0.06635757539993392
VRISSLRDS	9	Unmodified	_VRISSLRDS_					0	0	0			REV__ENST00000477250.1_1_13:36855391-36871856:-|nuORF	REV__ENST00000477250.1_1_13:36855391-36871856:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.7939453125	2	516.793455	1031.57236	-0.83709	-0.0004326	0.85733	0.00044306	0.020239	1.0459E-05	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.7932	1	8517	8517		25.574	1.3713	1	490270	+		63991	23833	42549	42567	72586	72586					0.057833597034687045
VRITFLISN	9	Unmodified	_VRITFLISN_					0	0	0		L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|54|2|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|54|2|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|54|2|sense	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8167724609375	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.58668	2	8300	8300;8312		47.657	8.7492	1	859730			63992	14592	42550	42568	72587;72588	72587					0.09498308748356976
VRITFLISN	9	Unmodified	_VRITFLISN_					0	0	0		L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|54|2|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|54|2|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|54|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.81640625	2	531.818941	1061.62333	-0.033207	-1.766E-05	-3.353	-0.0017832	-3.3862	-0.0018009	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.76764	1	8758	8758		34.173	5.023	1	1254600			63993	14592	42550	42568	72589	72589					0.09498308748356976
VRITFLISN	9	Unmodified	_VRITFLISN_					0	0	0		L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|54|2|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|54|2|sense	L1MC3_dup7485|chrX:107082628-107084901:-|1.2928351849749795|0.3649514377649216|1.82|62.0|54|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8164672851562	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.77696	1	8472	8472		31.53	5.9558	1	1422300			63994	14592	42550	42568	72590	72590					0.09498308748356976
VRIVKCLRPK	10	Unmodified	_VRIVKCLRPK_					0	0	0			REV__ENSG00000137819|ENST00000395407|PAQR5	REV__ENSG00000137819|ENST00000395407|PAQR5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.92962646484375	3	404.597149	1210.76962	0.0096484	3.9037E-06	2.9769	0.0012044	2.9866	0.0012084	404.59836733506836	48.223	1.6712	48.216	47.816	49.487	-0.0071526					55	40	2	0	0	0	0.37624	1	3968	3968		25.126	8.4086	1	241820	+		63995	19413	42551	42569	72591	72591					0.17266287712550366
VRKAGGHD	8	Unmodified	_VRKAGGHD_					0	0	0		ENSG00000162302|ENST00000334205|RPS6KA4;nc|ENSG00000162302|O75676-2|RPS6KA4	ENSG00000162302|ENST00000334205|RPS6KA4	ENSG00000162302|ENST00000334205|RPS6KA4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22747802734375	2	420.227751	838.440949	-1.3082	-0.00054975	1.6711	0.00070225	0.36288	0.00015249	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.88915	1	7210	7210		35.201	1.6851	1	419890			63996	5677	42552	42570	72592	72592					0.015265941262327942
VRKALPPG	8	Unmodified	_VRKALPPG_					0	0	0		ENST00000597150.5_1_2:97261350-97297069:-|nuORF;nc|ENSG00000114982|Q9P2N6|KANSL3;nc|ENSG00000114982|Q9P2N6-2|KANSL3	ENST00000597150.5_1_2:97261350-97297069:-|nuORF	ENST00000597150.5_1_2:97261350-97297069:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	419.7738342285156	2	419.268887	836.523222	0.26179	0.00010976	0.10454	4.3831E-05	0.36633	0.00015359	419.2678367641426	48.412	0.54433	48.449	48.205	48.749	0.037735					18	13	2	0	0	0	0.4196	1	3723	3723		8.8223	4.5061	1	203150			63997	14347	42553	42571	72593	72593					0.09842116205174989
VRKARPVS	8	Unmodified	_VRKARPVS_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;ENST00000498360.5_1_1:225142255-225148920:+|nuORF;nc|ENSG00000185842|Q0VDD8-3|DNAH14;nc|ENSG00000185842|Q0VDD8-2|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.79168701171875	2	456.790518	911.566484	0.18235	8.3295E-05	3.5287	0.0016119	3.7111	0.0016952	456.79200220887	40.258	1.2138	40.227	39.65	40.864	-0.030987					94	32	4	0	0	0	0.89043	1	2846	2846		35.618	0.41757	1	1159000			63998	7747	42554	42572	72594	72594					0.10716305982464291
VRKARPVS	8	Unmodified	_VRKARPVS_					0	0	0		nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14;ENST00000498360.5_1_1:225142255-225148920:+|nuORF;nc|ENSG00000185842|Q0VDD8-3|DNAH14;nc|ENSG00000185842|Q0VDD8-2|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7912292480469	2	456.790518	911.566484	0.25783	0.00011777	4.1861	0.0019121	4.4439	0.0020299	456.79223981105497	41.505	1.1583	41.474	40.833	41.991	-0.030987					78	30	4	0	0	0	0.89043	1	2958	2958		35.618	5.1146	1	325120			63999	7747	42554	42572	72595	72595					0.10716305982464291
VRKARRYSA	9	Unmodified	_VRKARRYSA_					0	0	0		nc|ENSG00000155158|Q5VTQ0-5|TTC39B;nc|ENSG00000155158|Q5VTQ0-2|TTC39B;nc|ENSG00000155158|Q5VTQ0-6|TTC39B;ENSG00000155158|ENST00000512701|TTC39B;nc|ENSG00000155158|Q5VTQ0-3|TTC39B;nc|ENSG00000155158|Q5VTQ0|TTC39B;nc|ENSG00000155158|Q5VTQ0-7|TTC39B;ENST00000380853.1_1_9:15172019-15185442:-|nuORF;nc|ENSG00000155158|Q5VTQ0-4|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8299560546875	2	553.830706	1105.64686	2.0416	0.0011307	-3.0404	-0.0016839	-0.99881	-0.00055317	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.7932	1	9503	9503		21.96	1.013	1	5457600			64000	5314	42555	42573	72596	72596					0.09826167305527633
VRKARRYSA	9	Unmodified	_VRKARRYSA_					0	0	0		nc|ENSG00000155158|Q5VTQ0-5|TTC39B;nc|ENSG00000155158|Q5VTQ0-2|TTC39B;nc|ENSG00000155158|Q5VTQ0-6|TTC39B;ENSG00000155158|ENST00000512701|TTC39B;nc|ENSG00000155158|Q5VTQ0-3|TTC39B;nc|ENSG00000155158|Q5VTQ0|TTC39B;nc|ENSG00000155158|Q5VTQ0-7|TTC39B;ENST00000380853.1_1_9:15172019-15185442:-|nuORF;nc|ENSG00000155158|Q5VTQ0-4|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8301391601562	2	553.830706	1105.64686	0.7451	0.00041266	-1.999	-0.0011071	-1.2539	-0.00069446	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.77244	1	8663	8663		32.812	0.85756	1	2008100			64001	5314	42555	42573	72597	72597					0.09826167305527633
VRKARRYSA	9	Unmodified	_VRKARRYSA_					0	0	0		nc|ENSG00000155158|Q5VTQ0-5|TTC39B;nc|ENSG00000155158|Q5VTQ0-2|TTC39B;nc|ENSG00000155158|Q5VTQ0-6|TTC39B;ENSG00000155158|ENST00000512701|TTC39B;nc|ENSG00000155158|Q5VTQ0-3|TTC39B;nc|ENSG00000155158|Q5VTQ0|TTC39B;nc|ENSG00000155158|Q5VTQ0-7|TTC39B;ENST00000380853.1_1_9:15172019-15185442:-|nuORF;nc|ENSG00000155158|Q5VTQ0-4|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.829833984375	2	553.830706	1105.64686	-1.4397	-0.00079733	0.48085	0.00026631	-0.95882	-0.00053102	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.76764	1	8943	8943		34.173	1.3601	1	5453100			64002	5314	42555	42573	72598	72598					0.09826167305527633
VRKARRYSA	9	Unmodified	_VRKARRYSA_					0	0	0		nc|ENSG00000155158|Q5VTQ0-5|TTC39B;nc|ENSG00000155158|Q5VTQ0-2|TTC39B;nc|ENSG00000155158|Q5VTQ0-6|TTC39B;ENSG00000155158|ENST00000512701|TTC39B;nc|ENSG00000155158|Q5VTQ0-3|TTC39B;nc|ENSG00000155158|Q5VTQ0|TTC39B;nc|ENSG00000155158|Q5VTQ0-7|TTC39B;ENST00000380853.1_1_9:15172019-15185442:-|nuORF;nc|ENSG00000155158|Q5VTQ0-4|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	nc|ENSG00000155158|Q5VTQ0-5|TTC39B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.830810546875	2	553.830706	1105.64686	-1.3791	-0.00076379	0.87112	0.00048245	-0.50797	-0.00028133	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.55097	1	10902	10902		49.442	14.29	1	5911200			64003	5314	42555	42573	72599	72599					0.09826167305527633
VRKEGHHLKHL	11	Unmodified	_VRKEGHHLKHL_					0	0	0		ENST00000237177.10_1_6:90581009-90581078:+|nuORF	ENST00000237177.10_1_6:90581009-90581078:+|nuORF	ENST00000237177.10_1_6:90581009-90581078:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.93267822265625	3	451.933588	1352.77894	0.75362	0.00034059	-2.7643	-0.0012493	-2.0107	-0.00090869	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.76251	1	10515	10515		19.263	0.73163	1	952120			64004	9235	42556	42574	72600	72600					0.11665772322453449
VRKFFASK	8	Unmodified	_VRKFFASK_					0	0	0			REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9	REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7959899902344	2	491.795269	981.575986	-0.70573	-0.00034708	1.5523	0.0007634	0.84654	0.00041632	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.8347	1	4447	4447		23.042	1.3402	1	772710	+		64005	21408	42557	42575	72601	72601					0.08446074267999393
VRKFFASK	8	Unmodified	_VRKFFASK_					0	0	0			REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9	REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79571533203125	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.884	1	3696	3696		33.516	4.366	1	1502200	+		64006	21408	42557	42575	72602	72602					0.08446074267999393
VRKFFASK	8	Unmodified	_VRKFFASK_					0	0	0			REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9	REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7967529296875	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.8347	2	4122	4035;4122		34.173	0	1	412030	+		64007	21408	42557	42575	72603;72604	72604					0.08446074267999393
VRKFFASK	8	Unmodified	_VRKFFASK_					0	0	0			REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9	REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7958068847656	2	491.795269	981.575986	-1.0684	-0.00052544	1.9332	0.00095072	0.86475	0.00042528	491.7960749594644	45.401	0.52972	45.865	45.676	46.205	0.46313					42	12	4	0	0	0	0.89043	1	4231	4231		35.618	0.41757	1	5204000	+		64008	21408	42557	42575	72605	72605					0.08446074267999393
VRKFFASK	8	Unmodified	_VRKFFASK_					0	0	0			REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9	REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.795654296875	2	491.795269	981.575986	-0.85536	-0.00042066	1.576	0.00077505	0.72059	0.00035438	491.79594594464555	45.253	0.48487	46.149	45.883	46.368	0.89542					30	11	3	0	0	0	0.89494	1	4219	4219		37.159	0	1	6858700	+		64009	21408	42557	42575	72606	72606					0.08446074267999393
VRKFPTIN	8	Unmodified	_VRKFPTIN_					0	0	0		ENST00000532567.5_1_11:118888149-118888206:-|nuORF;ENST00000392902.2_1_9:125791831-125791966:-|nuORF	ENST00000532567.5_1_11:118888149-118888206:-|nuORF	ENST00000532567.5_1_11:118888149-118888206:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79071044921875	2	487.792727	973.5709	-1.3135	-0.00064074	-3.0168	-0.0014716	-4.3304	-0.0021123	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.87479	1	8395	8395		30.504	2.2494	1	2239000			64010	11037	42558	42576	72607	72607					0.08305770405388557
VRKGGTRALLE	11	Unmodified	_VRKGGTRALLE_					0	0	0		ENSG00000249853|ENST00000312719|HS3ST5;ENSG00000002587|ENST00000002596|HS3ST1	ENSG00000249853|ENST00000312719|HS3ST5	ENSG00000249853|ENST00000312719|HS3ST5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.5809631347656	3	400.578811	1198.7146	3.1805	0.001274	0.74448	0.00029822	3.925	0.0015723	400.5789660187623	112.82	1.5726	112.85	112.71	114.29	0.028854					100	42	3	0	0	0	0.74405	1	12488	12488		23.378	0.79825	1	4827300			64011	8840	42559	42577	72608	72608					0.12319572445676386
VRKGLVGP	8	Unmodified	_VRKGLVGP_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2681579589844	2	413.268887	824.523222	-0.14251	-5.8895E-05	-1.1765	-0.00048621	-1.319	-0.0005451	413.26825932473713	73.168	1.1748	73.556	72.836	74.011	0.38779					38	30	2	0	0	0	0.86288	1	8193	8193		26.796	3.7536	1	804440			64012	7193	42560	42578	72609	72609					0.1039411620519104
VRKGPPRSPAV	11	Unmodified	_VRKGPPRSPAV_					0	0	0		ENST00000554614.2_1_14:73712316-73712565:-|nuORF	ENST00000554614.2_1_14:73712316-73712565:-|nuORF	ENST00000554614.2_1_14:73712316-73712565:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3535766601562	2	582.354014	1162.69348	0.72245	0.00042072	-1.6748	-0.00097534	-0.95238	-0.00055462	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.7144	2	11016	11016;11139		29.17	1.0886	1	132960000			64013	13723	42561	42579	72610;72611	72610					0.1186360713677459
VRKGPPRSPAV	11	Unmodified	_VRKGPPRSPAV_					0	0	0		ENST00000554614.2_1_14:73712316-73712565:-|nuORF	ENST00000554614.2_1_14:73712316-73712565:-|nuORF	ENST00000554614.2_1_14:73712316-73712565:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353759765625	2	582.354014	1162.69348	-1.3468	-0.00078429	0.41376	0.00024096	-0.93299	-0.00054333	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.7144	2	10990	10847;10990		29.17	1.2878	1	120000000			64014	13723	42561	42579	72612;72613	72613					0.1186360713677459
VRKGPPRSPAV	11	Unmodified	_VRKGPPRSPAV_					0	0	0		ENST00000554614.2_1_14:73712316-73712565:-|nuORF	ENST00000554614.2_1_14:73712316-73712565:-|nuORF	ENST00000554614.2_1_14:73712316-73712565:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3536987304688	2	582.354014	1162.69348	-1.3468	-0.00078431	0.84174	0.00049019	-0.50506	-0.00029412	582.3544118745583	107.09	1.166	107.12	106.59	107.75	0.036118					85	27	4	0	0	0	0.7434	1	11351	11351		23.523	0	1	1230900			64015	13723	42561	42579	72614	72614					0.1186360713677459
VRKGTGRGVP	10	Unmodified	_VRKGTGRGVP_					0	0	0			REV__ENSG00000101972|ENST00000371145|STAG2;REV__nc|ENSG00000118007|Q8WVM7-2|STAG1;REV__nc|ENSG00000101972|Q8N3U4|STAG2	REV__nc|ENSG00000101972|Q8N3U4|STAG2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.808837890625	2	513.811982	1025.60941	-1.4174	-0.00072826	-4.4658	-0.0022946	-5.8832	-0.0030229	513.8095821035303	49.907	2.3471	49.907	49.314	51.661	0					162	58	4	0	0	0	0.86218	1	3977	3977		32.812	3.6629	1	1977600	+		64016	17314;29747;18289	42562	42580	72615	72615					0.09763076039894258
VRKILIVIARP	11	Unmodified	_VRKILIVIARP_					0	0	0		ENSG00000069020|ENST00000403625|MAST4;nc|ENSG00000069020|O15021-2|MAST4;nc|ENSG00000069020|O15021-3|MAST4;nc|ENSG00000069020|O15021-6|MAST4	ENSG00000069020|ENST00000403625|MAST4	ENSG00000069020|ENST00000403625|MAST4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.6308898925781	3	426.630847	1276.87071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.337	1	82.763	82.263	83.263	0.42646								0	0	0	0.56276	1	9521	9521		12.957	2.8536	1				64017	1212	42563	42581	72616	72616					0.24335062686941455
VRKIMRLH	8	Unmodified	_VRKIMRLH_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	526.8087158203125	2	526.829121	1051.64369	-0.10436	-5.4978E-05	3.5281	0.0018587	3.4237	0.0018037	526.8308187793324	98.457	1.5329	98.685	98.17	99.703	0.22787					59	35	3	0	0	0	0.4196	1	10224	10224		44.531	8.9128	1	244180	+		64018	22270	42564	42582	72617	72617					0.11993200927167891
VRKIMRLH	8	Unmodified	_VRKIMRLH_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.8277587890625	2	526.829121	1051.64369	0.80975	0.0004266	2.8477	0.0015003	3.6575	0.0019269	526.8304317829728	98.564	1.3663	98.72	98.276	99.642	0.15659					58	31	3	0	0	0	0.9159	1	10233	10233		44.531	2.1349	1	269120	+		64019	22270	42564	42582	72618	72618					0.11993200927167891
VRKIMRLH	8	Unmodified	_VRKIMRLH_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8086547851562	2	526.829121	1051.64369	2.0543	0.0010823	0.55738	0.00029364	2.6117	0.0013759	526.829174067366	98.478	1.2454	98.839	98.277	99.522	0.36136					59	30	4	0	0	0	0.4196	1	11956	11956		60.294	19.721	1	992870	+		64020	22270	42564	42582	72619	72619					0.11993200927167891
VRKIMRLH	8	Unmodified	_VRKIMRLH_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.808349609375	2	526.829121	1051.64369	1.7259	0.00090926	1.0479	0.00055205	2.7738	0.0014613	526.8294904906904	98.504	0.92919	98.881	98.532	99.461	0.37679					60	22	4	0	0	0	0.4196	1	11994	11994		71.378	32.572	1	984140	+		64021	22270	42564	42582	72620	72620					0.11993200927167891
VRKKLEQHIRK	11	Unmodified	_VRKKLEQHIRK_					0	0	0		ENSG00000189357|ENST00000419782|SPATA31D4;ENSG00000186788|ENST00000445385|SPATA31D3	ENSG00000189357|ENST00000419782|SPATA31D4	ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.9744567871094	3	478.972043	1433.8943	0.22007	0.00010541	4.2342	0.0020281	4.4543	0.0021335	478.9740845349807	44.981	2.0928	44.958	43.729	45.822	-0.023079					123	48	4	0	0	0	0.7896	1	3522	3522		13.508	2.5097	1	463950			64022	7818	42565	42583	72621	72621					0.19470876453442543
VRKKPGALSPV	11	Unmodified	_VRKKPGALSPV_					0	0	0		nc|ENSG00000102858|O60291-4|MGRN1;nc|ENSG00000102858|O60291|MGRN1;nc|ENSG00000102858|O60291-3|MGRN1;ENSG00000102858|ENST00000262370|MGRN1	nc|ENSG00000102858|O60291-4|MGRN1	nc|ENSG00000102858|O60291-4|MGRN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3694458007812	2	576.36659	1150.71863	0.4156	0.00023954	4.1918	0.002416	4.6074	0.0026556	576.3688772331659	49.515	1.7464	49.558	48.71	50.457	0.04224					101	42	3	0	0	0	0.69995	1	3856	3856		31.53	0	1	371290			64023	2025	42566	42584	72622	72622					0.14929661939368088
VRKKTKTNPF	10	Unmodified	_VRKKTKTNPF_					0	0	0		nc|ENSG00000198301|Q9NVU7-2|SDAD1;ENST00000395710.5_1_4:76871905-76902632:-|nuORF;ENSG00000198301|ENST00000356260|SDAD1	nc|ENSG00000198301|Q9NVU7-2|SDAD1	nc|ENSG00000198301|Q9NVU7-2|SDAD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.9182434082031	3	406.915423	1217.72444	3.1175	0.0012686	4.0951	0.0016664	7.2126	0.0029349	406.9170417726239	111.58	0.58581	111.62	111.48	112.07	0.04184					22	18	2	0	0	0	0.85285	1	13524	13524		16.717	0.71061	1	373610			64024	8263	42567	42585	72623	72623					0.12428760451052767
VRKLNSPVLLF	11	Unmodified	_VRKLNSPVLLF_					0	0	0			REV__nc|ENSG00000119121|Q9BX84-4|TRPM6	REV__nc|ENSG00000119121|Q9BX84-4|TRPM6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	643.4049682617188	2	643.403173	1284.79179	0.024155	1.5542E-05	4.4022	0.0028324	4.4263	0.0028479	643.4058708786354	105.99	2.0717	105.99	105.33	107.4	0					204	47	5	0	0	0	0.7434	1	11128	11128		23.523	0	1	11188000	+		64025	18339	42568	42586	72624	72624					0.16078790662004394
VRKLRRRQTM	10	Unmodified	_VRKLRRRQTM_					0	0	0		ENST00000583745.1_1_17:18163989-18166463:+|nuORF	ENST00000583745.1_1_17:18163989-18166463:+|nuORF	ENST00000583745.1_1_17:18163989-18166463:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.6093444824219	3	448.61034	1342.80919	-0.14494	-6.5021E-05	-2.2673	-0.0010171	-2.4122	-0.0010822	448.9437169224278	77.071	0.84238	77.124	76.655	77.498	0.052704					75	41	2	0	0	0	0.8492	1	7455	7455		18.531	1.3643	1	780830			64026	14125	42569	42587	72625	72625					0.15149807715988572
VRKNLIPTRI	10	Unmodified	_VRKNLIPTRI_					0	0	0		chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|25	chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|25	chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|25	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.9298400878906	3	403.931185	1208.77173	-0.86	-0.00034738	-2.9637	-0.0011971	-3.8237	-0.0015445	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.888	1	3976	3976		11.097	0.99287	1	2612300			64027	435	42570	42588	72626	72626					0.17569039722025082
VRKNLIPTRI	10	Unmodified	_VRKNLIPTRI_					0	0	0		chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|25	chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|25	chr4:98891332-98893166|25|22.28|0.36|5.96|-|0|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|25	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.92950439453125	3	403.931185	1208.77173	-1.067	-0.00043099	-3.6376	-0.0014693	-4.7046	-0.0019003	403.9296217138762	44.931	1.8227	45.775	44.612	46.435	0.84437					158	44	5	0	0	0	0.85251	1	4234	4234		19.263	0.73163	1	5907700			64028	435	42570	42588	72627	72627					0.17569039722025082
VRKNQKGD	8	Unmodified	_VRKNQKGD_					0	0	0			REV__nc|ENSG00000187950|Q7RTY7|OVCH1	REV__nc|ENSG00000187950|Q7RTY7|OVCH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7668762207031	2	472.76724	943.519927	-0.93004	-0.00043969	0.85085	0.00040225	-0.079188	-3.7437E-05	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.86288	1	8318	8318		26.796	1.3459	1	526610	+		64029	30115	42571	42589	72628	72628					0.04590821360523023
VRKPEEMM	8	Unmodified	_VRKPEEMM_					0	0	0		ENSG00000215421|ENST00000299687|ZNF407;nc|ENSG00000215421|Q9C0G0-3|ZNF407;nc|ENSG00000215421|Q9C0G0-2|ZNF407	ENSG00000215421|ENST00000299687|ZNF407	ENSG00000215421|ENST00000299687|ZNF407	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.2530822753906	2	510.254262	1018.49397	1.825	0.00093124	-3.4627	-0.0017668	-1.6376	-0.00083561	510.2523862232492	23.754	0.59693	23.18	22.836	23.433	-0.57415					27	13	3	0	0	0	0.91005	1	1110	1110		42.474	0	1	224690			64030	8652	42572	42590	72629	72629					-0.014535321976154592
VRKQPKILPR	10	Unmodified	_VRKQPKILPR_					0	0	0			REV__nc|ENSG00000141448|Q92908-2|GATA6	REV__nc|ENSG00000141448|Q92908-2|GATA6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.2728271484375	3	412.275063	1233.80336	-1.2298	-0.00050703	-4.0868	-0.0016849	-5.3166	-0.0021919	412.273252644864	44.235	1.4245	45.08	44.612	46.037	0.84438					83	34	3	0	0	0	0.888	1	4073	4073		11.097	0.99287	1	1661900	+		64031	19686	42573	42591	72630	72630					0.19581032475980464
VRKQPKILPR	10	Unmodified	_VRKQPKILPR_					0	0	0			REV__nc|ENSG00000141448|Q92908-2|GATA6	REV__nc|ENSG00000141448|Q92908-2|GATA6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	412.275063	1233.80336	0.20678	8.5248E-05	-5.7504	-0.0023707	-5.5436	-0.0022855	412.27258826945786	44.369	1.545	44.819	44.362	45.907	0.45025	-0.13016	-0.0011928	NaN	11.097	67	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1667100	+		64032	19686	42573	42591							0.19581032475980464
VRKRRGGAEKR	11	Unmodified	_VRKRRGGAEKR_					0	0	0			REV__ENSG00000006118|ENST00000453848|TMEM132A	REV__ENSG00000006118|ENST00000453848|TMEM132A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.2732849121094	3	438.272604	1311.79598	2.7278	0.0011955	-1.8995	-0.00083248	0.82831	0.00036302	438.27166879991887	107.29	1.1275	107.26	106.75	107.88	-0.034134					106	26	5	0	0	0	0.73647	2	11847	11847;11906		25.068	2.5311	1	5019700	+		64033	16097	42574	42592	72631;72632	72631					0.15255692928258213
VRKSQARPEG	10	Unmodified	_VRKSQARPEG_					0	0	0			REV__chr7:98617887-98619649|24|15.71|0.28|5.81|+|2|NPTX2,None|1	REV__chr7:98617887-98619649|24|15.71|0.28|5.81|+|2|NPTX2,None|1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.3197631835938	2	564.317628	1126.6207	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.588	1	55.588	55.088	56.088	0								0	0	0	0.45132	1	4726	4726		29.17	0	1		+		64034	15914	42575	42593	72633	72633					0.06245853343352792
VRKTLFQMLA	10	Unmodified	_VRKTLFQMLA_					0	0	0			REV__ENST00000567736.5_1_16:89365554-89366736:-|nuORF	REV__ENST00000567736.5_1_16:89365554-89366736:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.9068603515625	3	402.905759	1205.69545	1.9688	0.00079325	1.9058	0.00076788	3.8747	0.0015611	402.9063869778674	22.059	0.52871	21.616	21.326	21.854	-0.44324					26	11	3	0	0	0	0.85633	1	863	863		21.686	0.8486	1	86037	+		64035	28885	42576	42594	72634	72634					0.10082899830399583
VRKTLRKSA	9	Unmodified	_VRKTLRKSA_					0	0	0			REV__ENSG00000168924|ENST00000302787|LETM1;REV__ENST00000597330.1_1_19:58557520-58558126:+|nuORF	REV__ENSG00000168924|ENST00000302787|LETM1	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.8448486328125	2	529.843282	1057.67201	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.112	1	23.165	22.665	23.665	0.05291								0	0	0	0.29796	1	720	720		31.53	1.0262	1		+		64036	21534;29265	42577	42595	72635	72635					0.14548222108101072
VRKTPTKATLH	11	Unmodified	_VRKTPTKATLH_					0	0	0			REV__nc|ENSG00000075292|Q14966-3|ZNF638	REV__nc|ENSG00000075292|Q14966-3|ZNF638	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3796997070312	2	626.380229	1250.7459	0.93883	0.00058807	-1.8374	-0.0011509	-0.89857	-0.00056285	626.3789780788948	105.75	2.6569	105.79	104.95	107.61	0.038322					312	62	6	0	0	0	0.72106	1	11751	11751		28.081	1.0342	1	47947000	+		64037	16707	42578	42596	72636	72636					0.1305614547973164
VRKTQRDTQYR	11	Unmodified	_VRKTQRDTQYR_					0	0	0		ENSG00000085185|ENST00000540052|BCORL1;nc|ENSG00000085185|Q5H9F3-1|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	ENSG00000085185|ENST00000540052|BCORL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.6458740234375	3	484.267296	1449.78006	-1.0756	-0.00052089	-1.0585	-0.00051261	-2.1342	-0.0010335	484.60135114335606	46.263	0.55855	47.186	46.756	47.314	0.92315					24	13	2	0	0	0	0.17966	1	4309	4309		19.627	0	1	233080			64038	1527	42579	42597	72637	72637					0.07315941900696998
VRKVPWPS	8	Unmodified	_VRKVPWPS_					0	0	0			REV__chr1:209583772-209590972|41|23.07|0.27|6.44|+|0|CAMK1G,None|1	REV__chr1:209583772-209590972|41|23.07|0.27|6.44|+|0|CAMK1G,None|1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2850646972656	2	484.787444	967.560336	-1.8221	-0.00088333	2.0765	0.0010067	0.25438	0.00012332	484.787991301906	41.03	0.85788	41.664	41.496	42.354	0.6339					49	23	3	0	0	0	0.4196	1	3599	3599		33.516	5.2613	1	3425800	+		64039	15438	42580	42598	72638	72638					0.07525787750944346
VRKVVEHGLFV	11	Unmodified	_VRKVVEHGLFV_					0	0	0		nc|ENSG00000114316|Q13107-2|USP4;ENSG00000114316|ENST00000265560|USP4;ENST00000464168.5_1_3:49362133-49365232:-|nuORF;nc|ENSG00000114316|Q13107-3|USP4	nc|ENSG00000114316|Q13107-2|USP4	nc|ENSG00000114316|Q13107-2|USP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	641.8820190429688	2	641.885147	1281.75574	-1.1529	-0.00074004	-3.1	-0.0019899	-4.2529	-0.0027299	641.8830152006487	97.54	4.7087	97.742	96.617	101.33	0.20206					360	109	5	0	0	0	0.69995	1	9963	9963		31.53	1.2121	1	3521600			64040	2767	42581	42599	72639	72639					0.12613333485114708
VRLCAPLQI	9	Unmodified	_VRLCAPLQI_					0	0	0			REV__ENSG00000213380|ENST00000306875|COG8	REV__ENSG00000213380|ENST00000306875|COG8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.7964172363281	2	506.802237	1011.58992	-1.1816	-0.00059884	-1.852	-0.00093859	-3.0336	-0.0015374	506.8012726682809	44.534	3.0875	44.53	42.489	45.577	-0.0041618					139	73	2	0	0	0	0.58151	1	3366	3366		47.916	10.756	1	459990	+		64041	23614	42582	42600	72640	72640					0.08458983704770162
VRLFTQLKFG	10	Unmodified	_VRLFTQLKFG_					0	0	0		nc|ENSG00000011021|P51797-6|CLCN6;ENSG00000011021|ENST00000346436|CLCN6;nc|ENSG00000011021|P51797-5|CLCN6;nc|ENSG00000011021|P51797-4|CLCN6;nc|ENSG00000011021|P51797-2|CLCN6;nc|ENSG00000011021|P51797-3|CLCN6	nc|ENSG00000011021|P51797-6|CLCN6	nc|ENSG00000011021|P51797-6|CLCN6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2327575683594	3	403.576519	1207.70773	-1.8214	-0.00073509	-1.9926	-0.00080418	-3.8141	-0.0015393	403.57562413788736	84.791	1.0441	84.941	84.58	85.624	0.14952					37	23	2	0	0	0	0.37624	1	8293	8293		27.047	16.461	1	77598			64042	777	42583	42601	72641	72641					0.11218259565089284
VRLGIRSSS	9	Unmodified	_VRLGIRSSS_					0	0	0			REV__nc|ENSG00000138347|Q86TC9-2|MYPN	REV__nc|ENSG00000138347|Q86TC9-2|MYPN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906799316406	2	487.790715	973.566878	-0.085473	-4.1693E-05	-0.089202	-4.3512E-05	-0.17467	-8.5205E-05	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.76764	1	8422	8422		34.173	0	1	1889700	+		64043	19460	42584	42602	72642	72642					0.07903680911658739
VRLGIRSSS	9	Unmodified	_VRLGIRSSS_					0	0	0			REV__nc|ENSG00000138347|Q86TC9-2|MYPN	REV__nc|ENSG00000138347|Q86TC9-2|MYPN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7906494140625	2	487.790715	973.566878	-0.70733	-0.00034503	0.46293	0.00022581	-0.2444	-0.00011922	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.7932	1	8165	8165		24.519	2.5593	1	2348200	+		64044	19460	42584	42602	72643	72643					0.07903680911658739
VRLGLVKAP	9	Unmodified	_VRLGLVKAP_					0	0	0			REV__nc|ENSG00000150281|Q16619-2|CTF1	REV__nc|ENSG00000150281|Q16619-2|CTF1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.8169250488281	2	476.818744	951.622936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.179	1	33.289	32.789	33.789	0.10991								0	0	0	0.34024	1	1599	1599		17.365	0	1		+		64045	20206	42585	42603	72644	72644					0.14518933819124413
VRLGQEEVE	9	Unmodified	_VRLGQEEVE_					0	0	0		nc|ENSG00000156521|Q2T9J0-2|TYSND1;ENSG00000156521|ENST00000287078|TYSND1	nc|ENSG00000156521|Q2T9J0-2|TYSND1	nc|ENSG00000156521|Q2T9J0-2|TYSND1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	529.7793579101562	2	529.77747	1057.54039	0.30806	0.0001632	3.6299	0.001923	3.938	0.0020863	529.7792376545807	64.462	0.86823	64.428	63.938	64.807	-0.034256					51	22	3	0	0	0	0.76764	1	6166	6166		34.173	2.2177	1	324590			64046	5380	42586	42604	72645	72645					0.013919472296720414
VRLGSKGLN	9	Unmodified	_VRLGSKGLN_					0	0	0			REV__nc|ENSG00000169282|Q14722-2|KCNAB1;REV__ENSG00000170049|ENST00000303790|KCNAB3;REV__nc|ENSG00000069424|Q13303-5|KCNAB2	REV__nc|ENSG00000169282|Q14722-2|KCNAB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2882080078125	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.7932	1	10609	10609		26.693	1.1189	1	50843000	+		64047	21566;21628;29706	42587	42605	72646	72646					0.0874858239999412
VRLGVRGGSRL	11	Unmodified	_VRLGVRGGSRL_					0	0	0			REV__ENST00000515535.1_1_19:58596465-58596771:+|nuORF	REV__ENST00000515535.1_1_19:58596465-58596771:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.3629760742188	2	585.364913	1168.71527	-0.34304	-0.0002008	-0.070844	-4.1469E-05	-0.41389	-0.00024227	585.365021122546	97.98	1.0509	97.98	97.552	98.603	0					47	25	3	0	0	0	0.74763	1	9860	9860		22.58	2.5829	1	151400	+		64048	28033	42588	42606	72647	72647					0.13766411885376328
VRLHNLLKM	9	Unmodified	_VRLHNLLKM_					0	0	0		chrY:12686606-12687685|27|13.3|0.73|4.19|+|0|USP9Y,USP9Y|2	chrY:12686606-12687685|27|13.3|0.73|4.19|+|0|USP9Y,USP9Y|2	chrY:12686606-12687685|27|13.3|0.73|4.19|+|0|USP9Y,USP9Y|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	562.3434448242188	2	562.342061	1122.66957	-1.412	-0.00079401	4.2505	0.0023902	2.8386	0.0015962	562.3442982549859	90.512	3.3727	90.693	89.307	92.679	0.18029					187	79	3	0	0	0	0.7932	1	9013	9013		18.324	0.8564	1	509350			64049	557	42589	42607	72648	72648					0.11314050378769025
VRLHVKLNSL	10	Unmodified	_VRLHVKLNSL_					0	0	0			REV__nc|ENSG00000057657|O75626-3|PRDM1	REV__nc|ENSG00000057657|O75626-3|PRDM1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.2948608398438	2	589.87204	1177.72953	-0.41837	-0.00024679	-0.74126	-0.00043725	-1.1596	-0.00068403	589.8718081820477	75.703	0.95303	76.098	75.742	76.695	0.39507					28	22	2	0	0	0	0.37624	1	8642	8642		5.2201	0	1	160140	+		64050	16428	42590	42608	72649	72649					0.14777064313648225
VRLIEIRVLM	10	Unmodified	_VRLIEIRVLM_					0	0	0			REV__nc|ENSG00000166762|Q96P56-4|CATSPER2	REV__nc|ENSG00000166762|Q96P56-4|CATSPER2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3935546875	2	621.391751	1240.76895	-0.079201	-4.9215E-05	1.8932	0.0011764	1.814	0.0011272	621.3928058082562	107.78	0.51279	107.78	107.32	107.83	0					31	12	4	0	0	0	0.85694	1	11201	11201		21.96	4.5949	1	2165700	+		64051	26426	42591	42609	72650	72650					0.15819448272850423
VRLIHHFLIN	10	Unmodified	_VRLIHHFLIN_					0	0	0			REV__ENSG00000083799|ENST00000427738|CYLD	REV__ENSG00000083799|ENST00000427738|CYLD	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2195739746094	3	421.25578	1260.74551	0.86391	0.00036393	0.39561	0.00016665	1.2595	0.00053058	421.25577228868656	24.599	1.3857	24.271	23.804	25.19	-0.32825					44	30	2	0	0	0	0.37624	1	1214	1214		20.837	10.25	1	145380	+		64052	16861	42592	42610	72651	72651					0.12556770550554575
VRLIVIRAR	9	Unmodified	_VRLIVIRAR_					0	0	0			REV__ENST00000416030.1_1_9:76089327-76090080:-|nuORF	REV__ENST00000416030.1_1_9:76089327-76090080:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3737182617188	2	548.377292	1094.74003	-1.4498	-0.00079504	-4.1619	-0.0022823	-5.6117	-0.0030773	548.3748802153438	35.47	1.1138	35.47	34.867	35.98	0					77	29	3	0	0	0	0.7932	1	1955	1955		18.324	2.6826	1	301910	+		64053	26428	42593	42611	72652	72652					0.19645091758729905
VRLIVIRAR	9	Unmodified	_VRLIVIRAR_					0	0	0			REV__ENST00000416030.1_1_9:76089327-76090080:-|nuORF	REV__ENST00000416030.1_1_9:76089327-76090080:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3743896484375	2	548.377292	1094.74003	-1.4257	-0.00078185	-3.9799	-0.0021825	-5.4057	-0.0029643	548.3749403834641	37.356	2.5025	37.356	35.98	38.483	0					111	59	3	0	0	0	0.7932	1	2231	2231		16.473	4.2663	1	203100	+		64054	26428	42593	42611	72653	72653					0.19645091758729905
VRLIVIRAR	9	Unmodified	_VRLIVIRAR_					0	0	0			REV__ENST00000416030.1_1_9:76089327-76090080:-|nuORF	REV__ENST00000416030.1_1_9:76089327-76090080:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3749389648438	2	548.377292	1094.74003	-0.93575	-0.00051314	-4.429	-0.0024288	-5.3648	-0.0029419	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.78536	1	2552	2552		29.15	6.1071	1	651720	+		64055	26428	42593	42611	72654	72654					0.19645091758729905
VRLIVIRAR	9	Unmodified	_VRLIVIRAR_					0	0	0			REV__ENST00000416030.1_1_9:76089327-76090080:-|nuORF	REV__ENST00000416030.1_1_9:76089327-76090080:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	548.377292	1094.74003	-0.27712	-0.00015196	-5.0965	-0.0027948	-5.3736	-0.0029468	548.3742984686651	37.329	0.6186	37.642	37.206	37.825	0.31312	0.24122	-0.00015464	NaN	29.15	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	407000	+		64056	26428	42593	42611							0.19645091758729905
VRLIVIRAR	9	Unmodified	_VRLIVIRAR_					0	0	0			REV__ENST00000416030.1_1_9:76089327-76090080:-|nuORF	REV__ENST00000416030.1_1_9:76089327-76090080:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	548.377292	1094.74003	0.68453	0.00037538	-5.8579	-0.0032123	-5.1734	-0.002837	548.3738766725716	37.105	0.50542	37.591	37.325	37.83	0.48581	0.19015	-0.00098966	NaN	29.15	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178060	+		64057	26428	42593	42611							0.19645091758729905
VRLKEGKEP	9	Unmodified	_VRLKEGKEP_					0	0	0			REV__chr2:165179691-165186569|16|13.81|0.0|15.5|-|2|SCN3A,SCN3A|1	REV__chr2:165179691-165186569|16|13.81|0.0|15.5|-|2|SCN3A,SCN3A|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	528.3136596679688	2	528.314023	1054.61349	-0.63246	-0.00033414	0.83828	0.00044288	0.20582	0.00010874	528.3145655024048	98.746	1.1121	98.746	98.15	99.262	0					55	27	3	0	0	0	0.64922	1	9963	9963		44.117	0	1	337340	+		64058	15735	42594	42612	72655	72655					0.08837120742964544
VRLKEWLPPM	10	Unmodified	_VRLKEWLPPM_					0	0	0		ENST00000570292.1_1_16:15134044-15134209:-|nuORF	ENST00000570292.1_1_16:15134044-15134209:-|nuORF	ENST00000570292.1_1_16:15134044-15134209:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.31427001953125	3	423.577643	1267.7111	0.94808	0.00040159	-0.31971	-0.00013542	0.62837	0.00026616	423.57753932993216	19.069	0.47072	18.594	18.407	18.877	-0.47484					11	10	2	0	0	0	0.37624	1	504	504		16.007	0	1	44984			64059	13995	42595	42613	72656	72656					0.08795186347424533
VRLKHRKLREQ	11	Unmodified	_VRLKHRKLREQ_					0	0	0		ENSG00000104783|ENST00000648319|KCNN4	ENSG00000104783|ENST00000648319|KCNN4	ENSG00000104783|ENST00000648319|KCNN4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	489.236572265625	3	488.307426	1461.90045	-0.086365	-4.2173E-05	-2.3652	-0.0011549	-2.4516	-0.0011971	488.30621767362163	63.962	1.4525	63.961	63.392	64.844	-0.00078583					71	52	2	0	0	0	0.17729	1	5942	5942		23.378	8.0404	1	66216			64060	2148	42596	42614	72657	72657					0.18797394684975188
VRLKLYTGLM	10	Unmodified	_VRLKLYTGLM_					0	0	0		ENST00000488653.6_1_3:123674922-123675245:-|nuORF	ENST00000488653.6_1_3:123674922-123675245:-|nuORF	ENST00000488653.6_1_3:123674922-123675245:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.3590087890625	2	597.357376	1192.7002	-0.84393	-0.00050413	-1.4489	-0.0008655	-2.2928	-0.0013696	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.86589	1	10996	10996		29.15	5.6269	1	1407500			64061	12636	42597	42615	72658	72658					0.11155783973140387
VRLKQIQDSQ	10	Unmodified	_VRLKQIQDSQ_					0	0	0			REV__ENSG00000101004|ENST00000278886|NINL	REV__ENSG00000101004|ENST00000278886|NINL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	405.5640563964844	3	405.566571	1213.67788	-1.5858	-0.00064316	-3.0129	-0.0012219	-4.5987	-0.0018651	405.56520201833376	60.249	1.8554	60.249	59.343	61.199	0					165	76	3	0	0	0	0.86106	1	5330	5330		33.922	4.3709	1	181560	+		64062	17236	42598	42616	72659	72659					0.0795927582908007
VRLKVGSRKPE	11	Unmodified	_VRLKVGSRKPE_					0	0	0		ENST00000454117.1_1_1:23695790-23697703:+|nuORF;ENST00000437367.3_1_1:23695790-23698012:+|nuORF;nc|ENSG00000249087|Q8NC38|ZNF436-AS1;ENST00000335648.3_1_1:23695790-23696168:+|nuORF	ENST00000454117.1_1_1:23695790-23697703:+|nuORF	ENST00000454117.1_1_1:23695790-23697703:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	423.59759521484375	3	423.598094	1267.77245	-1.87	-0.00079214	0.80292	0.00034011	-1.0671	-0.00045203	423.59834897722675	105.64	2.006	105.71	105.05	107.06	0.073112					176	48	5	0	0	0	0.7434	1	11205	11205		21.032	3.8655	1	4588600			64063	10161	42599	42617	72660	72660					0.1492783437106482
VRLLGVCL	8	Unmodified	_VRLLGVCL_					0	0	0		nc|ENSG00000178568|Q15303-4|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-2|ERBB4;ENSG00000178568|ENST00000342788|ERBB4;ENST00000484594.5_1_2:212426591-213403254:-|nuORF;ENST00000246868.6_1_7:66452970-66453129:-|nuORF	nc|ENSG00000178568|Q15303-4|ERBB4	nc|ENSG00000178568|Q15303-4|ERBB4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	436.77435302734375	2	436.772948	871.531344	0.36031	0.00015737	1.5614	0.00068196	1.9217	0.00083933	436.77349327524536	26.738	0.89724	26.766	26.451	27.349	0.028172					66	41	2	0	0	0	0.80963	1	1036	1036		15.636	1.8609	1	200440			64064	7212	42600	42618	72661	72661					0.0904392713028983
VRLLLKPPL	9	Unmodified	_VRLLLKPPL_					0	0	0		ENST00000489955.1_1_2:165551047-165551113:-|nuORF	ENST00000489955.1_1_2:165551047-165551113:-|nuORF	ENST00000489955.1_1_2:165551047-165551113:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.82666015625	2	524.865695	1047.71684	-0.039097	-2.0521E-05	0.91134	0.00047833	0.87224	0.00045781	524.8664717400336	99.407	0.20113	99.457	99.355	99.557	0.04982					7	4	2	0	0	0	0.20789	1	10546	10546		7.6903	0	1	56850			64065	12659	42601	42619	72662	72662					0.19488652921404537
VRLLRDGT	8	Unmodified	_VRLLRDGT_					0	0	0			REV__ENST00000339852.4_1_19:39691114-39691434:+|nuORF	REV__ENST00000339852.4_1_19:39691114-39691434:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.2803955078125	2	465.279983	928.545414	-1.1036	-0.00051349	1.1861	0.00055185	0.082455	3.8365E-05	465.28037254514356	89.207	2.109	89.207	88.71	90.819	0					110	48	4	0	0	0	0.90465	1	8662	8662		40.573	1.7665	1	1091500	+		64066	25240	42602	42620	72663	72663					0.07828295882939074
VRLNETVKALV	11	Unmodified	_VRLNETVKALV_					0	0	0			REV__ENSG00000132382|ENST00000254718|MYBBP1A	REV__ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.59124755859375	3	414.590717	1240.75032	1.2811	0.00053112	-0.14838	-6.1516E-05	1.1327	0.00046961	414.5906694648557	18.113	2.0122	17.636	17.425	19.437	-0.47694					106	43	5	0	0	0	0.45515	1	347	347		55.084	5.5479	1	3319700	+		64067	18999	42603	42621	72664	72664					0.13957609902649892
VRLPEVRISDN	11	Unmodified	_VRLPEVRISDN_					0	0	0		ENSG00000117154|ENST00000251296|IGSF21	ENSG00000117154|ENST00000251296|IGSF21	ENSG00000117154|ENST00000251296|IGSF21	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	649.3645629882812	2	649.364776	1296.715	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.407	1	67.423	66.923	67.923	0.016205								0	0	0	0.56276	1	6332	6332		26.063	1.5442	1				64068	2966	42604	42622	72665	72665					0.07850947374868156
VRLPFPATG	9	Unmodified	_VRLPFPATG_					0	0	0		ENST00000391788.6_1_19:52901126-52901666:+|nuORF	ENST00000391788.6_1_19:52901126-52901666:+|nuORF	ENST00000391788.6_1_19:52901126-52901666:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2779235839844	2	479.279452	956.544351	-0.95082	-0.00045571	-3.0433	-0.0014586	-3.9941	-0.0019143	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.72402	2	10153	10153;10267		38.806	1.647	1	6350300			64069	11000	42605	42623	72666;72667	72666					0.06434081514032641
VRLQSSFLL	9	Unmodified	_VRLQSSFLL_					0	0	0		nc|ENSG00000285231|A0A2R8YFM6|OOSP3	nc|ENSG00000285231|A0A2R8YFM6|OOSP3	nc|ENSG00000285231|A0A2R8YFM6|OOSP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.81689453125	2	531.818941	1061.62333	-1.4587	-0.00077575	-2.4822	-0.0013201	-3.9408	-0.0020958	531.81751777312	86.444	2.8795	86.608	84.725	87.604	0.16473					178	66	3	0	0	0	0.69624	1	8376	8376		40.778	1.972	1	1159800			64070	15329	42606	42624	72668	72668					0.09498308748334239
VRLRAAASS	9	Unmodified	_VRLRAAASS_					0	0	0		ENST00000334869.8_1_14:93199115-93214962:-|nuORF;ENST00000553371.1_2_14:93199069-93214962:-|nuORF	ENST00000334869.8_1_14:93199115-93214962:-|nuORF	ENST00000334869.8_1_14:93199115-93214962:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774963378906	2	465.777608	929.540663	-0.25577	-0.00011913	0.16818	7.8335E-05	-0.08759	-4.0797E-05	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.76764	1	7999	7999		34.173	6.2903	1	451640			64071	10152	42607	42625	72669	72669					0.07307411740168845
VRLRAGSHIK	10	Unmodified	_VRLRAGSHIK_					0	0	0			REV__ENST00000259883.3_1_6:28249556-28249685:+|nuORF	REV__ENST00000259883.3_1_6:28249556-28249685:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	568.8541259765625	2	568.854181	1135.69381	0.52259	0.00029728	-2.4856	-0.0014139	-1.963	-0.0011166	568.852691190287	102.04	3.409	102.23	101.71	105.12	0.19484					356	84	6	0	0	0	0.86218	1	10923	10923		32.812	6.0163	1	84800000	+		64072	24362	42608	42626	72670	72670					0.13139026856629243
VRLRGGPG	8	Unmodified	_VRLRGGPG_					0	0	0		ENST00000455580.5_1_2:28974542-28974650:+|nuORF	ENST00000455580.5_1_2:28974542-28974650:+|nuORF	ENST00000455580.5_1_2:28974542-28974650:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24609375	2	406.248486	810.48242	3.1449	0.0012776	-2.7889	-0.001133	0.35606	0.00014465	406.24727030482205	114.56	0.97545	114.57	114.14	115.12	0.0094528					67	46	2	0	0	0	0.80963	1	13841	13841		15.636	0	1	78189			64073	11954	42609	42627	72671	72671					0.06959774885569914
VRLRKPLRLNR	11	Unmodified	_VRLRKPLRLNR_					0	0	0			REV__ENSG00000114650|ENST00000265565|SCAP;REV__nc|ENSG00000114650|Q12770-2|SCAP	REV__ENSG00000114650|ENST00000265565|SCAP	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	474.4311828613281	3	474.316033	1419.92627	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.813	1	29.824	29.324	30.324	0.01123								0	0	0	0.56276	1	1280	1280		22.562	10.926	1		+		64074	18058;29792	42610	42628	72672	72672					0.23310288927245892
VRLRPHVSP	9	Unmodified	_VRLRPHVSP_					0	0	0		ENSG00000104856|ENST00000221452|RELB	ENSG00000104856|ENST00000221452|RELB	ENSG00000104856|ENST00000221452|RELB	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.8207397460938	2	530.82235	1059.63015	-0.88248	-0.00046844	-1.442	-0.00076543	-2.3245	-0.0012339	530.821384723199	80.761	1.5978	80.761	80.141	81.738	0					159	57	4	0	0	0	0.78983	1	7443	7443		27.882	0	1	2196600			64075	2155	42611	42629	72673	72673					0.10271666419566827
VRLRVRNKLRK	11	Unmodified	_VRLRVRNKLRK_					0	0	0			REV__ENST00000336458.12_2_17:7210701-7210749:+|nuORF	REV__ENST00000336458.12_2_17:7210701-7210749:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.99078369140625	3	479.991549	1436.95282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.599	1	15.599	15.099	16.099	0								0	0	0	0.56276	1	46	46		18.531	14.912	1		+		64076	25191	42612	42630	72674	72674					0.25181977818556334
VRLRVRNKLRK	11	Unmodified	_VRLRVRNKLRK_					0	0	0			REV__ENST00000336458.12_2_17:7210701-7210749:+|nuORF	REV__ENST00000336458.12_2_17:7210701-7210749:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.9925537109375	3	479.991549	1436.95282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.657	1	15.633	15.133	16.133	-0.024207								0	0	0	0.56276	1	60	60		10.104	0.8921	1		+		64077	25191	42612	42630	72675	72675					0.25181977818556334
VRLTIKWQVV	10	Unmodified	_VRLTIKWQVV_					0	0	0			REV__ENST00000545752.1_1_12:122399919-122407612:+|nuORF	REV__ENST00000545752.1_1_12:122399919-122407612:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.3931884765625	2	621.390065	1240.76558	0.69841	0.00043398	3.6119	0.0022444	4.3103	0.0026784	621.3922056168815	104.57	2.6797	104.61	104.09	106.77	0.039856					250	63	5	0	0	0	0.86471	1	11510	11510		30.318	7.7381	1	13976000	+		64078	28532	42613	42631	72676	72676					0.15482521490480394
VRLVCPLAGV	10	Unmodified	_VRLVCPLAGV_					0	0	0			REV__ENST00000382952.7_2_4:1205816-1205999:-|nuORF	REV__ENST00000382952.7_2_4:1205816-1205999:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.808837890625	2	513.810062	1025.60557	0.090876	4.6693E-05	-2.2226	-0.001142	-2.1317	-0.0010953	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.86589	1	4141	4141		29.15	2.4566	1	1448700	+		64079	25982	42614	42632	72677	72677					0.09379270221802471
VRLVKWPPG	9	Unmodified	_VRLVKWPPG_					0	0	0			REV__nc|ENSG00000160075|Q9NP77-2|SSU72	REV__nc|ENSG00000160075|Q9NP77-2|SSU72	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.7869262695312	2	526.324194	1050.63383	-0.21827	-0.00011488	1.205	0.00063424	0.98677	0.00051936	526.3246454004473	51.184	1.1135	51.161	50.751	51.865	-0.02343					45	31	2	0	0	0	0.20789	1	4523	4523		20.482	0	1	85119	+		64080	29962	42615	42633	72678	72678					0.11054336193410563
VRLVVRFY	8	Unmodified	_VRLVVRFY_					0	0	0		ENSG00000183856|ENST00000361170|IQGAP3	ENSG00000183856|ENST00000361170|IQGAP3	ENSG00000183856|ENST00000361170|IQGAP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3250122070312	2	526.324194	1050.63383	-0.53497	-0.00028157	1.5071	0.00079323	0.97214	0.00051166	526.3248432698025	60.176	2.0168	60.176	59.103	61.12	0.00051117					98	68	2	0	0	0	0.86288	1	5148	5148		26.796	0	1	220370			64081	7567	42616	42634	72679	72679					0.110543361934333
VRMAPIPASWR	11	Unmodified	_VRMAPIPASWR_					0	0	0		ENST00000568223.6_1_16:767500-767908:+|nuORF	ENST00000568223.6_1_16:767500-767908:+|nuORF	ENST00000568223.6_1_16:767500-767908:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.3630981445312	2	642.355699	1282.69685	7.159	0.0045986	3.0963	0.0019889	10.255	0.0065875	642.3583965461547	111.81	0.66489	111.84	111.7	112.36	0.032707					85	24	5	0	0	0	0.69995	2	13582	13582;13606		31.53	3.6476	1	7954900			64082	13957	42617	42635	72680;72681	72680					0.06680533919143272
VRMINSPV	8	Oxidation (M)	_VRM(Oxidation (M))INSPV_		VRM(1)INSPV		VRM(41)INSPV	0	0	1		ENSG00000189037|ENST00000339042|DUSP21	ENSG00000189037|ENST00000339042|DUSP21	ENSG00000189037|ENST00000339042|DUSP21	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2541198730469	2	466.25512	930.495686	-1.0712	-0.00049944	-1.7254	-0.00080447	-2.7966	-0.0013039	466.2541904327881	60.586	1.2512	60.686	59.935	61.186	0.10082					87	49	2	0	0	0	0.90465	1	5295	5295		40.573	7.7602	1	202870			64083	7982	42618	42636	72682	72682		137			0.02765844882651436
VRMTLLIFDKL	11	Unmodified	_VRMTLLIFDKL_					0	0	0			REV__nc|ENSG00000173821|Q63HN8|RNF213	REV__nc|ENSG00000173821|Q63HN8|RNF213	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27484130859375	3	450.272219	1347.79483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.29	1	113.27	112.77	113.77	-0.024811								0	0	0	0.56276	1	12533	12533		20.315	1.784	1		+		64084	21953	42619	42637	72683	72683					0.13484297724494354
VRNGSLFIL	9	Unmodified	_VRNGSLFIL_					0	0	0			REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8035888671875	2	509.805834	1017.59712	-0.054506	-2.7787E-05	-4.0835	-0.0020818	-4.1381	-0.0021096	509.80363557683324	84.581	2.6013	84.648	83.04	85.641	0.067177					161	59	4	0	0	0	0.72402	1	8538	8538		38.806	6.8513	1	828920	+		64085	30256	42620	42638	72684	72684					0.08902039576844345
VRNGSLFIL	9	Unmodified	_VRNGSLFIL_					0	0	0			REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	REV__nc|ENSG00000266967|Q9BTE6-3|AARSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	509.8037109375	2	509.805834	1017.59712	-0.054339	-2.7702E-05	-4.0902	-0.0020852	-4.1445	-0.0021129	509.8036353916263	86.61	4.9168	86.678	85.467	90.383	0.067444					365	114	5	0	0	0	0.76255	1	8622	8622		35.618	0.41757	1	2906900	+		64086	30256	42620	42638	72685	72685					0.08902039576844345
VRNHEDLGLQ	10	Unmodified	_VRNHEDLGLQ_					0	0	0			REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8085327148438	2	590.807094	1179.59963	-0.64674	-0.0003821	3.8591	0.00228	3.2124	0.0018979	590.8092294374726	60.998	0.44298	60.986	60.696	61.139	-0.012199					42	17	3	0	0	0	0.2575	1	5669	5669		77.318	5.4401	1	215350	+		64087	17805	42621	42639	72686	72686					0.017018432438362652
VRNHEDLGLQ	10	Unmodified	_VRNHEDLGLQ_					0	0	0			REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.8095092773438	2	590.807094	1179.59963	0.77133	0.00045571	2.4367	0.0014396	3.2081	0.0018953	590.8085136634772	59.814	1.2746	59.908	59.359	60.634	0.094063					111	41	3	0	0	0	0.23822	1	5115	5115		79.713	2.9384	1	4884800	+		64088	17805	42621	42639	72687	72687					0.017018432438362652
VRNHEDLGLQ	10	Unmodified	_VRNHEDLGLQ_					0	0	0			REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	590.807094	1179.59963	-0.64674	-0.0003821	3.8591	0.00228	3.2124	0.0018979	590.8092294374726	60.998	0.44298	60.986	60.696	61.139	-0.012199	0.04213	0.00046465	NaN	77.318	42	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	215350	+		64089	17805	42621	42639							0.017018432438362652
VRNHEDLGLQ	10	Unmodified	_VRNHEDLGLQ_					0	0	0			REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	590.807094	1179.59963	0.77142	0.00045576	2.6196	0.0015477	3.391	0.0020034	590.8083622652714	60.761	0.46108	60.861	60.619	61.08	0.10082	-0.082034	-0.00099997	NaN	77.318	35	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	181740	+		64090	17805	42621	42639							0.017018432438362652
VRNHEDLGLQ	10	Unmodified	_VRNHEDLGLQ_					0	0	0			REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	590.807094	1179.59963	0.5304	0.00031336	3.2863	0.0019416	3.8167	0.0022549	590.8086440954082	60.828	0.69527	60.947	60.465	61.16	0.11901	0.0034812	-0.00021222	NaN	77.318	41	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	174010	+		64091	17805	42621	42639							0.017018432438362652
VRNHEDLGLQ	10	Unmodified	_VRNHEDLGLQ_					0	0	0			REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	590.807094	1179.59963	-1.2371	-0.00073089	4.4394	0.0026228	3.2023	0.0018919	590.8093480093323	60.59	0.60212	60.98	60.537	61.139	0.38945	0.036424	0.0011503	NaN	77.318	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	289810	+		64092	17805	42621	42639							0.017018432438362652
VRNITKKSSHL	11	Unmodified	_VRNITKKSSHL_					0	0	0		ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	641.8819580078125	2	641.883136	1281.75172	-0.046992	-3.0164E-05	-0.94307	-0.00060534	-0.99006	-0.0006355	641.8824102798699	97.933	4.3771	97.933	97.03	101.41	0					304	104	4	0	0	0	0.61369	1	9791	9791		42.864	0	1	2217900			64093	5530	42622	42640	72688	72688					0.12211243991418996
VRNITKKSSHL	11	Unmodified	_VRNITKKSSHL_					0	0	0		ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.882080078125	2	641.883136	1281.75172	0.89498	0.00057447	-2.058	-0.001321	-1.163	-0.00074653	641.8816647321656	95.707	2.6304	95.87	94.248	96.878	0.16316					218	62	4	0	0	0	0.65746	1	9802	9802		37.812	1.3648	1	2156900			64094	5530	42622	42640	72689	72689					0.12211243991418996
VRNITKKSSHL	11	Unmodified	_VRNITKKSSHL_					0	0	0		ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	641.8823852539062	2	641.883136	1281.75172	2.6248	0.0016848	-3.6695	-0.0023554	-1.0447	-0.00067061	641.8805933285469	97.45	4.198	97.841	96.863	101.06	0.39065					301	103	5	0	0	0	0.65746	1	11703	11703		37.812	1.3648	1	4455800			64095	5530	42622	42640	72690	72690					0.12211243991418996
VRNKLPVLR	9	Unmodified	_VRNKLPVLR_					0	0	0			REV__nc|ENSG00000146426|Q8IVF5-3|TIAM2	REV__nc|ENSG00000146426|Q8IVF5-3|TIAM2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	548.3759155273438	2	547.861475	1093.7084	-0.29171	-0.00015982	-0.034775	-1.9052E-05	-0.32649	-0.00017887	547.8614831964132	37.821	0.87358	37.797	37.35	38.223	-0.023979					26	19	2	0	0	0	0.20789	1	2522	2522		42.396	6.7778	1	82706	+		64096	20016	42623	42641	72691	72691					0.16529099004765158
VRNKSIKS	8	Unmodified	_VRNKSIKS_					0	0	0			REV__ENST00000517607.1_1_8:10679572-10690446:-|nuORF	REV__ENST00000517607.1_1_8:10679572-10690446:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.2914123535156	2	466.287808	930.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.193	1	57.298	56.798	57.798	0.1055								0	0	0	0.29631	1	4843	4843		25.45	1.2474	1		+		64097	23886	42624	42642	72692	72692					0.09300582399987434
VRNVLLFN	8	Unmodified	_VRNVLLFN_					0	0	0			REV__ENSG00000198246|ENST00000373189|SLC29A3	REV__ENSG00000198246|ENST00000373189|SLC29A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7910461425781	2	487.792727	973.5709	-0.48923	-0.00023864	-3.7823	-0.001845	-4.2716	-0.0020836	487.7908346896154	84.189	4.0374	84.624	83.216	87.254	0.43538					297	98	4	0	0	0	0.86791	1	9950	9950		28.254	0	1	1599600	+		64098	23312	42625	42643	72693	72693					0.08305770405377189
VRPAAPRSPR	10	Unmodified	_VRPAAPRSPR_					0	0	0			REV__ENST00000543289.5_1_19:1388924-1393403:+|nuORF	REV__ENST00000543289.5_1_19:1388924-1393403:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8299560546875	2	553.830706	1105.64686	-0.64284	-0.00035603	-0.53464	-0.0002961	-1.1775	-0.00065213	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.86047	1	8493	8493		23.523	0.48021	1	1181400	+		64099	28506	42626	42644	72694	72694					0.09826167305504896
VRPAARAA	8	Unmodified	_VRPAARAA_					0	0	0		ENST00000310421.4_1_8:67578936-67579050:-|nuORF;ENST00000545837.1_1_12:66583090-66590663:+|nuORF;ENST00000261233.8_1_12:66583006-66597530:+|nuORF;ENST00000457197.2_1_12:66583039-66603949:+|nuORF	ENST00000310421.4_1_8:67578936-67579050:-|nuORF	ENST00000310421.4_1_8:67578936-67579050:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2492980957031	2	406.248486	810.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.98	1	119.96	119.46	120.46	-0.024033								0	0	0	0.29631	1	13289	13289		25.45	0	1				64100	9400	42627	42645	72695	72695					0.06959774885547176
VRPALERSLKN	11	Unmodified	_VRPALERSLKN_					0	0	0		nc|ENSG00000151632|P52895-2|AKR1C2;ENST00000460124.5_1_10:5042672-5046051:-|nuORF;ENST00000477661.1_1_10:5005492-5009304:+|nuORF;ENSG00000187134|ENST00000380872|AKR1C1;ENSG00000151632|ENST00000380753|AKR1C2	nc|ENSG00000151632|P52895-2|AKR1C2	nc|ENSG00000151632|P52895-2|AKR1C2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.882080078125	2	641.883136	1281.75172	1.9607	0.0012585	-3.025	-0.0019417	-1.0643	-0.00068315	641.8810415769531	95.839	2.2822	95.782	94.474	96.756	-0.057526					187	53	4	0	0	0	0.72106	1	10243	10243		28.081	2.5074	1	1600600			64101	5131	42628	42646	72696	72696					0.12211243991418996
VRPALMEP	8	Unmodified	_VRPALMEP_					0	0	0			REV__ENST00000424842.5_3_10:79577627-79579118:-|nuORF	REV__ENST00000424842.5_3_10:79577627-79579118:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79248046875	2	456.752213	911.489873	0.014803	6.7615E-06	2.8061	0.0012817	2.8209	0.0012885	456.7526904823613	38.218	0.1811	38.16	38.038	38.219	-0.057915					5	4	2	0	0	0	0.4196	1	2242	2242		26.796	2.5934	1	27215	+		64102	26524	42629	42647	72697	72697					0.030587463709707663
VRPASQQPLP	10	Unmodified	_VRPASQQPLP_					0	0	0		ENST00000409263.5_1_11:72552542-72554538:-|nuORF	ENST00000409263.5_1_11:72552542-72554538:-|nuORF	ENST00000409263.5_1_11:72552542-72554538:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.840087890625	2	546.811648	1091.60874	-0.49556	-0.00027098	-4.3046	-0.0023538	-4.8001	-0.0026248	546.8091825415461	101.52	0.24999	101.52	101.37	101.62	0					9	5	2	0	0	0	0.37624	1	10335	10335		40.778	1.5253	1	48912			64103	11303	42630	42648	72698	72698					0.06660236600191638
VRPCLPVPLL	10	Carbamidomethyl (C)	_VRPC(Carbamidomethyl (C))LPVPLL_	VRPC(1)LPVPLL		VRPC(44)LPVPLL		0	1	0		ENST00000493132.1_1_22:24123155-24123332:+|nuORF	ENST00000493132.1_1_22:24123155-24123332:+|nuORF	ENST00000493132.1_1_22:24123155-24123332:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3535766601562	2	582.352094	1162.68964	-0.28407	-0.00016543	2.7667	0.0016112	2.4827	0.0014458	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.71042	1	10825	10825		44.117	10.195	1	61091000			64104	12717	42631	42649	72699	72699	165				0.11479801318728278
VRPCLPVPLL	10	Carbamidomethyl (C)	_VRPC(Carbamidomethyl (C))LPVPLL_	VRPC(1)LPVPLL		VRPC(46)LPVPLL		0	1	0		ENST00000493132.1_1_22:24123155-24123332:+|nuORF	ENST00000493132.1_1_22:24123155-24123332:+|nuORF	ENST00000493132.1_1_22:24123155-24123332:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.353271484375	2	582.352094	1162.68964	2.7406	0.001596	0.14445	8.4122E-05	2.885	0.0016801	582.3520595184258	103.16	3.4183	103.43	103.08	106.5	0.26524					242	92	5	0	0	0	0.67608	1	12707	12707		45.952	10.334	1	7862700			64105	12717	42631	42649	72700	72700	165				0.11479801318728278
VRPDLRAS	8	Unmodified	_VRPDLRAS_					0	0	0		ENST00000466346.1_1_11:1972144-1974292:+|nuORF	ENST00000466346.1_1_11:1972144-1974292:+|nuORF	ENST00000466346.1_1_11:1972144-1974292:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2642822265625	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.89962	1	7596	7596		38.806	5.2906	1	2957200			64106	12131	42632	42650	72701	72701					0.054357228488470355
VRPDLRAS	8	Unmodified	_VRPDLRAS_					0	0	0		ENST00000466346.1_1_11:1972144-1974292:+|nuORF	ENST00000466346.1_1_11:1972144-1974292:+|nuORF	ENST00000466346.1_1_11:1972144-1974292:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2640075683594	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.87479	2	8237	8237;8306		33.516	0	1	4885100			64107	12131	42632	42650	72702;72703	72702					0.054357228488470355
VRPDLRAS	8	Unmodified	_VRPDLRAS_					0	0	0		ENST00000466346.1_1_11:1972144-1974292:+|nuORF	ENST00000466346.1_1_11:1972144-1974292:+|nuORF	ENST00000466346.1_1_11:1972144-1974292:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2639465332031	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.884	2	8405	8405;8456		38.806	0	1	4814400			64108	12131	42632	42650	72704;72705	72704					0.054357228488470355
VRPDLRAS	8	Unmodified	_VRPDLRAS_					0	0	0		ENST00000466346.1_1_11:1972144-1974292:+|nuORF	ENST00000466346.1_1_11:1972144-1974292:+|nuORF	ENST00000466346.1_1_11:1972144-1974292:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2641296386719	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.85277	4	7834	7834;7930;8002;8045		33.516	0	1	4597500			64109	12131	42632	42650	72706;72707;72708;72709	72706					0.054357228488470355
VRPERKKLPRR	11	Unmodified	_VRPERKKLPRR_					0	0	0		ENST00000483405.5_2_16:29911961-29916194:+|nuORF	ENST00000483405.5_2_16:29911961-29916194:+|nuORF	ENST00000483405.5_2_16:29911961-29916194:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9720153808594	3	478.975788	1433.90553	-1.9678	-0.00094254	-1.893	-0.00090669	-3.8608	-0.0018492	479.30912300096907	43.377	1.5252	43.377	42.724	44.249	0.00016785					100	36	3	0	0	0	0.81021	1	3386	3386		9.2118	0	1	374940			64110	12510	42633	42651	72710	72710					0.20593698547577333
VRPGAVRGG	9	Unmodified	_VRPGAVRGG_					0	0	0			REV__ENST00000373930.3_1_9:123476433-123476640:-|nuORF	REV__ENST00000373930.3_1_9:123476433-123476640:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.7604064941406	2	434.759218	867.503883	-0.5629	-0.00024473	4.1559	0.0018068	3.593	0.0015621	434.76067973092415	87.168	2.0805	87.623	86.978	89.058	0.45429					87	50	3	0	0	0	0.62081	2	10320	10308;10320		45.952	8.7928	1	1032200	+		64111	25775	42634	42652	72711;72712	72712					0.06483159914296266
VRPGKPGPWL	10	Unmodified	_VRPGKPGPWL_					0	0	0		ENST00000480931.1_1_3:128580492-128584319:-|nuORF	ENST00000480931.1_1_3:128580492-128584319:-|nuORF	ENST00000480931.1_1_3:128580492-128584319:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8299560546875	2	553.827101	1105.63965	1.287	0.00071279	4.2616	0.0023602	5.5486	0.003073	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.86452	1	9408	9408		30.504	1.3541	1	5348100			64112	12449	42635	42653	72713	72713					0.09105434705065818
VRPGLAPPAP	10	Unmodified	_VRPGLAPPAP_					0	0	0			REV__ENSG00000100368|ENST00000403662|CSF2RB	REV__ENSG00000100368|ENST00000403662|CSF2RB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79071044921875	2	487.792727	973.5709	-1.4694	-0.00071678	-3.0475	-0.0014866	-4.5169	-0.0022033	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.86147	1	8223	8223		33.516	0	1	607090	+		64113	17183	42636	42654	72714	72714					0.0830577040536582
VRPGLFKN	8	Unmodified	_VRPGLFKN_					0	0	0		nc|ENSG00000153820|Q2M3C7-2|SPHKAP;ENSG00000153820|ENST00000392056|SPHKAP	nc|ENSG00000153820|Q2M3C7-2|SPHKAP	nc|ENSG00000153820|Q2M3C7-2|SPHKAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7774353027344	2	465.779619	929.544686	-0.087401	-4.0709E-05	-4.3327	-0.0020181	-4.4201	-0.0020588	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.88915	1	8300	8300		35.201	4.6971	1	1330000			64114	5244	42637	42655	72715	72715					0.07709501233898663
VRPGLFKN	8	Unmodified	_VRPGLFKN_					0	0	0		nc|ENSG00000153820|Q2M3C7-2|SPHKAP;ENSG00000153820|ENST00000392056|SPHKAP	nc|ENSG00000153820|Q2M3C7-2|SPHKAP	nc|ENSG00000153820|Q2M3C7-2|SPHKAP	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77734375	2	465.779619	929.544686	-1.5315	-0.00071332	-2.8632	-0.0013336	-4.3947	-0.0020469	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.884	1	7783	7783		33.516	0.022601	1	991370			64115	5244	42637	42655	72716	72716					0.07709501233898663
VRPGLPVTF	9	Unmodified	_VRPGLPVTF_					0	0	0		nc|ENSG00000176058|Q4KMQ1-2|TPRN;nc|ENSG00000176058|Q4KMQ1-4|TPRN;nc|ENSG00000176058|Q4KMQ1-3|TPRN;ENSG00000176058|ENST00000409012|TPRN	nc|ENSG00000176058|Q4KMQ1-2|TPRN	nc|ENSG00000176058|Q4KMQ1-2|TPRN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	492.58135986328125	2	493.295102	984.575651	-0.23837	-0.00011759	-3.7293	-0.0018397	-3.9677	-0.0019573	493.2929671207301	25.129	0.42762	25.088	24.803	25.231	-0.04117					11	9	2	0	0	0	0.20789	1	1032	1032		30.504	0	1	10886			64116	7054	42638	42656	72717	72717					0.08274654548131366
VRPGLRGD	8	Unmodified	_VRPGLRGD_					0	0	0		ENST00000567007.5_1_16:67226100-67226544:+|nuORF	ENST00000567007.5_1_16:67226100-67226544:+|nuORF	ENST00000567007.5_1_16:67226100-67226544:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.25225830078125	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.87479	1	9337	9337		30.504	1.3541	1	2235800			64117	13945	42639	42657	72718	72718					0.04839453677379879
VRPGLRTG	8	Unmodified	_VRPGLRTG_					0	0	0		ENST00000296978.3_1_6:130687606-130761553:+|nuORF	ENST00000296978.3_1_6:130687606-130761553:+|nuORF	ENST00000296978.3_1_6:130687606-130761553:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2615966796875	2	428.261594	854.508634	2.6337	0.0011279	-2.49	-0.0010664	0.1437	6.154E-05	428.2604902387928	90.722	2.837	90.768	89.832	92.669	0.046448					260	67	6	0	0	0	0.79929	1	9437	9437		18.324	0	1	55300000			64118	9753	42640	42658	72719	72719					0.0755604405703707
VRPGLRTG	8	Unmodified	_VRPGLRTG_					0	0	0		ENST00000296978.3_1_6:130687606-130761553:+|nuORF	ENST00000296978.3_1_6:130687606-130761553:+|nuORF	ENST00000296978.3_1_6:130687606-130761553:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	428.26165771484375	2	428.261594	854.508634	1.2297	0.00052665	-1.0776	-0.00046151	0.1521	6.5138E-05	428.26104076888095	90.552	2.3243	91.003	90.412	92.737	0.45058					198	55	5	0	0	0	0.8347	1	10757	10757		23.042	0	1	32404000			64119	9753	42640	42658	72720	72720					0.0755604405703707
VRPGPAHLGR	10	Unmodified	_VRPGPAHLGR_					0	0	0			REV__ENST00000451794.5_1_2:97166351-97166474:-|nuORF	REV__ENST00000451794.5_1_2:97166351-97166474:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.2921142578125	2	530.312149	1058.60975	0.75542	0.00040061	-1.5543	-0.00082428	-0.79891	-0.00042367	530.310764539427	92.138	0.80682	92.294	92.068	92.875	0.15614					29	18	2	0	0	0	0.37624	1	9293	9293		32.812	22.547	1	77773	+		64120	26889	42641	42659	72721	72721					0.0827849575973687
VRPGPVYKP	9	Unmodified	_VRPGPVYKP_					0	0	0		nc|nan|A6NFR6|C5orf60;nc|nan|A6NFR6-3|C5orf60;nc|nan|A6NFR6-4|C5orf60;nc|nan|A6NFR6-2|C5orf60	nc|nan|A6NFR6|C5orf60	nc|nan|A6NFR6|C5orf60	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.8002624511719	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.744	1	52.761	52.261	53.261	0.017487								0	0	0	0.32469	1	4612	4612		21.96	3.6355	1				64121	15367	42642	42660	72722	72722					0.08122056922422871
VRPIPELPP	9	Unmodified	_VRPIPELPP_					0	0	0			REV__ENST00000597778.5_1_19:47996282-47999001:-|nuORF	REV__ENST00000597778.5_1_19:47996282-47999001:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.3059997558594	2	509.30821	1016.60187	0.22242	0.00011328	-4.4724	-0.0022778	-4.2499	-0.0021645	509.3057747987958	92.885	1.4312	93.335	92.732	94.163	0.44988					93	33	4	0	0	0	0.7932	1	11076	11076		24.203	1.1603	1	968200	+		64122	29272	42643	42661	72723	72723					0.09422923719591836
VRPITQAGRPI	11	Unmodified	_VRPITQAGRPI_					0	0	0		ENST00000556133.1_1_14:89307222-89313236:+|nuORF;nc|ENSG00000165533|Q8TAM2-6|TTC8;ENST00000556567.5_1_14:89291033-89307657:+|nuORF;nc|ENSG00000165533|Q8TAM2-3|TTC8;ENSG00000165533|ENST00000380656|TTC8;nc|ENSG00000165533|Q8TAM2|TTC8	ENST00000556133.1_1_14:89307222-89313236:+|nuORF	ENST00000556133.1_1_14:89307222-89313236:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3673706054688	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.73893	2	12831	12523;12831		24.519	2.5593	1	3346600			64123	6093	42644	42662	72724;72725	72725					0.12459876308275852
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.314208984375	2	516.314023	1030.61349	-0.68072	-0.00035146	0.32195	0.00016623	-0.35876	-0.00018524	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.78983	2	10001	10001;10337		27.882	3.6795	1	39641000	+		64124	21919	42645	42663	72726;72727	72726					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3150634765625	2	516.314023	1030.61349	-0.63194	-0.00032628	1.5468	0.00079865	0.9149	0.00047237	516.3149967454959	103.62	1.1732	103.62	103.18	104.36	0					52	28	2	0	0	0	0.7932	1	10639	10639		21.96	2.5999	1	411250	+		64125	21919	42645	42663	72728	72728					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3139038085938	2	516.314023	1030.61349	-0.047196	-2.4368E-05	-0.36182	-0.00018681	-0.40901	-0.00021118	516.3138212787865	99.407	3.756	99.457	98.395	102.15	0.049828					336	87	6	0	0	0	0.76255	4	10486	10477;10486;10712;10821		35.618	11.416	1	63062000	+		64126	21919	42645	42663	72729;72730;72731;72732	72730					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3131103515625	2	516.314023	1030.61349	-0.046988	-2.426E-05	0.67067	0.00034627	0.62368	0.00032201	516.3143957799225	103.64	1.2184	103.63	103.07	104.29	-0.0035706					70	29	3	0	0	0	0.77696	1	11167	11167		31.53	1.0262	1	638740	+		64127	21919	42645	42663	72733	72733					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.31396484375	2	516.314023	1030.61349	0.876	0.00045229	-1.3141	-0.00067851	-0.43813	-0.00022621	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.78983	1	10866	10866		27.882	3.6795	1	67025000	+		64128	21919	42645	42663	72734	72734					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3154907226562	2	516.314023	1030.61349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.26	1	118.29	117.79	118.79	0.026466								0	0	0	0.31738	1	13010	13010		24.519	0.31644	1		+		64129	21919	42645	42663	72735	72735					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3138427734375	2	516.314023	1030.61349	-0.25799	-0.00013321	-0.28251	-0.00014586	-0.5405	-0.00027907	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.77244	1	10563	10563		32.812	2.3088	1	82226000	+		64130	21919	42645	42663	72736	72736					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3131103515625	2	516.314023	1030.61349	-0.25527	-0.0001318	0.46152	0.00023829	0.20625	0.00010649	516.3141964907301	102.01	1.1313	102.2	101.89	103.02	0.19484					90	27	4	0	0	0	0.73802	1	10828	10828		37.812	7.3079	1	1199700	+		64131	21919	42645	42663	72737	72737					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.3133544921875	2	516.314023	1030.61349	0.81864	0.00042267	-0.69207	-0.00035732	0.12657	6.535E-05	516.3135947493408	102.18	1.1683	102.31	101.93	103.1	0.13523					75	28	3	0	0	0	0.7932	1	10770	10770		25.574	1.3713	1	1280900	+		64132	21919	42645	42663	72738	72738					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3134765625	2	516.314023	1030.61349	-1.5618	-0.0008064	1.1232	0.00057995	-0.4386	-0.00022645	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.76255	4	10617	10309;10380;10527;10617		35.618	5.3006	1	66055000	+		64133	21919	42645	42663	72739;72740;72741;72742	72742					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3140258789062	2	516.314023	1030.61349	-1.5618	-0.0008064	1.5892	0.00082053	0.027358	1.4125E-05	516.3147976322862	102.21	1.1591	102.35	101.93	103.09	0.13569					99	28	5	0	0	0	0.77696	1	10667	10667		31.53	0	1	1268100	+		64134	21919	42645	42663	72743	72743					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3140869140625	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.78528	4	12202	12202;12321;12485;12595		29.17	4.9673	1	4038100	+		64135	21919	42645	42663	72744;72745;72746;72747	72744					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3148193359375	2	516.314023	1030.61349	1.9037	0.0009829	-1.9331	-0.0009981	-0.029436	-1.5198E-05	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.78983	1	12176	12176		27.882	4.8398	1	22616000	+		64136	21919	42645	42663	72748	72748					0.09941120742928433
VRPKKTTTT	9	Unmodified	_VRPKKTTTT_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3145751953125	2	516.314023	1030.61349	1.791	0.00092474	-1.8271	-0.00094338	-0.036105	-1.8641E-05	516.312962916802	98.97	2.8555	99.333	98.727	101.58	0.36292					273	72	5	0	0	0	0.76764	2	12266	12169;12266		34.173	9.9698	1	24820000	+		64137	21919	42645	42663	72749;72750	72750					0.09941120742928433
VRPKQSSLS	9	Unmodified	_VRPKQSSLS_					0	0	0			REV__nc|ENSG00000130856|Q9UL36|ZNF236	REV__nc|ENSG00000130856|Q9UL36|ZNF236	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2911376953125	2	501.290548	1000.56654	0.16565	8.304E-05	-0.064258	-3.2212E-05	0.10139	5.0828E-05	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.78983	1	9823	9823		27.882	0	1	2717900	+		64138	18916	42646	42664	72751	72751					0.06628261191815454
VRPKRKHGT	9	Unmodified	_VRPKRKHGT_					0	0	0		nc|ENSG00000007264|P42679-3|MATK;ENSG00000007264|ENST00000310132|MATK;nc|ENSG00000007264|P42679-2|MATK	nc|ENSG00000007264|P42679-3|MATK	nc|ENSG00000007264|P42679-3|MATK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	539.832275390625	2	539.833249	1077.65194	-0.61983	-0.00033461	-0.73366	-0.00039606	-1.3535	-0.00073066	539.832722847018	95.45	1.7138	95.45	94.923	96.637	0					80	39	3	0	0	0	0.78536	1	9478	9478		29.15	4.6304	1	535420			64139	723	42647	42665	72752	72752					0.11622471168129778
VRPKRKHGT	9	Unmodified	_VRPKRKHGT_					0	0	0		nc|ENSG00000007264|P42679-3|MATK;ENSG00000007264|ENST00000310132|MATK;nc|ENSG00000007264|P42679-2|MATK	nc|ENSG00000007264|P42679-3|MATK	nc|ENSG00000007264|P42679-3|MATK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.8324584960938	2	539.833249	1077.65194	2.7941	0.0015083	-4.286	-0.0023137	-1.4919	-0.00080539	539.830784350364	95.087	2.072	95.029	94.598	96.67	-0.057526					123	48	4	0	0	0	0.78058	1	10164	10164		30.504	3.8107	1	1548000			64140	723	42647	42665	72753	72753					0.11622471168129778
VRPKRKHGT	9	Unmodified	_VRPKRKHGT_					0	0	0		nc|ENSG00000007264|P42679-3|MATK;ENSG00000007264|ENST00000310132|MATK;nc|ENSG00000007264|P42679-2|MATK	nc|ENSG00000007264|P42679-3|MATK	nc|ENSG00000007264|P42679-3|MATK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.8321533203125	2	539.833249	1077.65194	0.78948	0.00042619	-2.3818	-0.0012858	-1.5923	-0.0008596	539.8318474619688	94.896	1.5304	95.059	94.575	96.105	0.16308					86	36	3	0	0	0	0.78983	1	9730	9730		27.882	3.6795	1	945910			64141	723	42647	42665	72754	72754					0.11622471168129778
VRPKVAKPV	9	Unmodified	_VRPKVAKPV_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.3351135253906	2	497.332019	992.649485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.86	1	113.79	113.29	114.29	-0.07								0	0	0	0.36199	1	12333	12333		7.6903	3.705	1		+		64142	20437;29946;29947	42648	42666	72755	72755					0.15286622710459596
VRPKVTVYG	9	Unmodified	_VRPKVTVYG_					0	0	0			REV__ENST00000520623.5_1_8:27348689-27396319:+|nuORF	REV__ENST00000520623.5_1_8:27348689-27396319:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.80352783203125	2	509.805834	1017.59712	-0.89953	-0.00045859	-3.1665	-0.0016143	-4.066	-0.0020729	509.80411033690484	86.653	3.9833	86.653	85.446	89.43	0					310	92	4	0	0	0	0.78536	1	8388	8388		29.15	6.1071	1	1874600	+		64143	18438	42649	42667	72756	72756					0.08902039576855714
VRPLGRGG	8	Unmodified	_VRPLGRGG_					0	0	0			REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.2478332519531	2	406.248486	810.48242	-1.1354	-0.00046124	1.7834	0.0007245	0.64802	0.00026326	406.24912053143106	91.114	2.1144	91.114	90.563	92.677	0					101	49	3	0	0	0	0.90465	1	8854	8854		40.573	5.3719	1	849560	+		64144	27706	42650	42668	72757	72757					0.06959774885569914
VRPLGRGG	8	Unmodified	_VRPLGRGG_					0	0	0			REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24853515625	2	406.248486	810.48242	-0.18704	-7.5983E-05	0.46265	0.00018795	0.27561	0.00011197	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.80706	1	9143	9143		19.36	0	1	50007000	+		64145	27706	42650	42668	72758	72758					0.06959774885569914
VRPLGRGG	8	Unmodified	_VRPLGRGG_					0	0	0			REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.248291015625	2	406.248486	810.48242	1.1517	0.00046786	-0.91843	-0.00037311	0.23322	9.4746E-05	406.2481560789412	88.477	2.7042	88.403	87.725	90.429	-0.074005					264	63	5	0	0	0	0.80706	1	9372	9372		19.36	0	1	58759000	+		64146	27706	42650	42668	72759	72759					0.06959774885569914
VRPLGRGG	8	Unmodified	_VRPLGRGG_					0	0	0			REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2482604980469	2	406.248486	810.48242	2.7178	0.0011041	-2.1477	-0.00087251	0.57008	0.0002316	406.24748869064086	111.72	0.8214	111.69	111.25	112.07	-0.025414					71	31	3	0	0	0	0.81724	1	12351	12351		14.664	0	1	80466	+		64147	27706	42650	42668	72760	72760					0.06959774885569914
VRPLGRGG	8	Unmodified	_VRPLGRGG_					0	0	0			REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2484130859375	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.79929	2	9119	9119;9144		19.36	0	1	56664000	+		64148	27706	42650	42668	72761;72762	72761					0.06959774885569914
VRPLGRGG	8	Unmodified	_VRPLGRGG_					0	0	0			REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2483825683594	2	406.248486	810.48242	0.62319	0.00025317	-0.33604	-0.00013652	0.28715	0.00011666	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.80706	2	8870	8726;8870		26.796	0	1	38001000	+		64149	27706	42650	42668	72763;72764	72764					0.06959774885569914
VRPLGRGG	8	Unmodified	_VRPLGRGG_					0	0	0			REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	REV__ENST00000493894.1_1_22:29661211-29661415:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.2483825683594	2	406.248486	810.48242	-1.9275	-0.00078306	2.6578	0.0010797	0.73023	0.00029665	406.2494715444893	90.638	1.8224	90.818	90.389	92.211	0.18029					100	43	3	0	0	0	0.80706	1	9061	9061		19.36	0	1	761320	+		64150	27706	42650	42668	72765	72765					0.06959774885569914
VRPLLPKELLH	11	Unmodified	_VRPLLPKELLH_					0	0	0		ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.9455871582031	3	438.946724	1313.81834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.382	1	23.477	22.977	23.977	0.094501								0	0	0	0.56276	1	752	752		14.086	1.2743	1				64151	6230	42651	42669	72766	72766					0.17398479553321522
VRPLRRKLV	9	Unmodified	_VRPLRRKLV_					0	0	0		ENST00000320246.9_1_9:127020253-127064229:+|nuORF;ENST00000373600.7_1_9:127020253-127055187:+|nuORF	ENST00000320246.9_1_9:127020253-127064229:+|nuORF	ENST00000320246.9_1_9:127020253-127064229:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.8532104492188	2	568.890567	1135.76658	2.8852	0.0016414	-2.6271	-0.0014945	0.2581	0.00014683	568.8892959995604	102.35	0.44284	102.3	102.01	102.45	-0.047005					18	10	3	0	0	0	0.20789	1	11145	11145		12.207	5.0135	1	369230			64152	10026	42652	42670	72767	72767					0.2041278065005372
VRPLTLEVIR	10	Unmodified	_VRPLTLEVIR_					0	0	0			REV__nc|ENSG00000186191|P59827-2|BPIFB4	REV__nc|ENSG00000186191|P59827-2|BPIFB4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3826293945312	2	598.379697	1194.74484	-1.1086	-0.00066337	4.2168	0.0025232	3.1082	0.0018599	598.3822134554556	40.836	2.1266	40.836	40.058	42.185	0					129	63	3	0	0	0	0.87728	1	2634	2634		12.812	1.1758	1	352020	+		64153	22833	42653	42671	72768	72768					0.15525931110823876
VRPPGFVK	8	Unmodified	_VRPPGFVK_					0	0	0		ENST00000280557.10_1_12:123237429-123238318:+|nuORF	ENST00000280557.10_1_12:123237429-123238318:+|nuORF	ENST00000280557.10_1_12:123237429-123238318:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7546081542969	2	450.276712	898.538872	-1.5273	-0.00068771	-2.9372	-0.0013226	-4.4645	-0.0020103	450.2753928020233	80.939	0.89452	81.044	80.535	81.429	0.10527					40	22	2	0	0	0	0.4196	1	7708	7708		24.203	5.8783	1	62572			64154	9618	42654	42672	72769	72769					0.08554402722234045
VRPPKTSPGLR	11	Unmodified	_VRPPKTSPGLR_					0	0	0		nc|ENSG00000136883|Q96FN5|KIF12;ENSG00000136883|ENST00000640217|KIF12	nc|ENSG00000136883|Q96FN5|KIF12	nc|ENSG00000136883|Q96FN5|KIF12	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.366455078125	2	604.367121	1206.71969	-0.16822	-0.00010167	-0.91026	-0.00055013	-1.0785	-0.0006518	604.366463942122	104.88	3.4409	104.88	104	107.44	0					380	81	6	0	0	0	0.68532	1	10891	10891		33.922	1.1092	1	47715000			64155	4152	42655	42673	72770	72770					0.12459876308253115
VRPPKTSPGLR	11	Unmodified	_VRPPKTSPGLR_					0	0	0		nc|ENSG00000136883|Q96FN5|KIF12;ENSG00000136883|ENST00000640217|KIF12	nc|ENSG00000136883|Q96FN5|KIF12	nc|ENSG00000136883|Q96FN5|KIF12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3663940429688	2	604.367121	1206.71969	-0.48563	-0.0002935	-0.60717	-0.00036695	-1.0928	-0.00066045	604.3666606356671	104.76	3.5729	104.74	104.02	107.59	-0.014809					419	84	7	0	0	0	0.72106	1	11283	11283		28.081	0	1	63350000			64156	4152	42655	42673	72771	72771					0.12459876308253115
VRPPKTSPGLR	11	Unmodified	_VRPPKTSPGLR_					0	0	0		nc|ENSG00000136883|Q96FN5|KIF12;ENSG00000136883|ENST00000640217|KIF12	nc|ENSG00000136883|Q96FN5|KIF12	nc|ENSG00000136883|Q96FN5|KIF12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3667602539062	2	604.367121	1206.71969	1.0484	0.00063359	-2.1061	-0.0012728	-1.0577	-0.00063923	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.67778	1	11337	11337		35.152	2.3396	1	105850000			64157	4152	42655	42673	72772	72772					0.12459876308253115
VRPPKTSPGLR	11	Unmodified	_VRPPKTSPGLR_					0	0	0		nc|ENSG00000136883|Q96FN5|KIF12;ENSG00000136883|ENST00000640217|KIF12	nc|ENSG00000136883|Q96FN5|KIF12	nc|ENSG00000136883|Q96FN5|KIF12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3665771484375	2	604.367121	1206.71969	-1.2751	-0.0007706	0.20453	0.00012361	-1.0705	-0.00064699	604.3671626928399	104.48	3.6407	104.57	103.87	107.51	0.093857					428	89	6	0	0	0	0.6493	1	11132	11132		38.754	3.6016	1	103250000			64158	4152	42655	42673	72773	72773					0.12459876308253115
VRPPLDPTPFP	11	Unmodified	_VRPPLDPTPFP_					0	0	0		nc|ENSG00000150556|Q8NI32|LYPD6B;ENSG00000150556|ENST00000409642|LYPD6B;ENST00000498249.1_1_2:150061334-150071221:+|nuORF	nc|ENSG00000150556|Q8NI32|LYPD6B	nc|ENSG00000150556|Q8NI32|LYPD6B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	618.3467407226562	2	618.342781	1234.67101	2.5351	0.0015676	2.4621	0.0015224	4.9972	0.00309	618.3441911850834	97.887	3.6854	97.832	96.889	100.57	-0.055542					244	85	5	0	0	0	0.6921	1	10675	10675		32.812	4.9302	1	980120			64159	5072	42656	42674	72774	72774					0.06305962948499655
VRPPMGKG	8	Unmodified	_VRPPMGKG_					0	0	0			REV__ENST00000292539.8_1_8:145722273-145722696:+|nuORF	REV__ENST00000292539.8_1_8:145722273-145722696:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	421.2195739746094	2	421.239273	840.463992	0.81843	0.00034475	2.9029	0.0012228	3.7213	0.0015676	421.2427467333457	25.064	0.76617	24.736	24.295	25.061	-0.32825					36	16	3	0	0	0	0.4196	1	1214	1214		8.2313	4.2461	1	95732	+		64160	24680	42657	42675	72775	72775					0.037378969193582634
VRPPPTRRAG	10	Unmodified	_VRPPPTRRAG_					0	0	0			REV__ENST00000486194.1_1_6:29691304-29692118:+|nuORF	REV__ENST00000486194.1_1_6:29691304-29692118:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8297119140625	2	553.830706	1105.64686	-1.4397	-0.00079733	0.48085	0.00026631	-0.95882	-0.00053102	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.8608	1	8932	8932		34.173	0.25091	1	5453100	+		64161	27542	42658	42676	72776	72776					0.09826167305527633
VRPPRIPVFGT	11	Unmodified	_VRPPRIPVFGT_					0	0	0		ENST00000456318.5_2_3:184080790-184080952:+|nuORF	ENST00000456318.5_2_3:184080790-184080952:+|nuORF	ENST00000456318.5_2_3:184080790-184080952:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.869384765625	2	619.87204	1237.72953	-0.30615	-0.00018977	-3.8344	-0.0023768	-4.1405	-0.0025666	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.66929	1	10167	10167		36.447	4.9169	1	4796900			64162	11966	42659	42677	72777	72777					0.1201706431365892
VRPPRIPVFGT	11	Unmodified	_VRPPRIPVFGT_					0	0	0		ENST00000456318.5_2_3:184080790-184080952:+|nuORF	ENST00000456318.5_2_3:184080790-184080952:+|nuORF	ENST00000456318.5_2_3:184080790-184080952:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8690795898438	2	619.87204	1237.72953	-1.2246	-0.00075908	-3.2008	-0.0019841	-4.4254	-0.0027432	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.66929	2	9603	9498;9603		36.447	5.6474	1	3118800			64163	11966	42659	42677	72778;72779	72779					0.1201706431365892
VRPPRIPVFGT	11	Unmodified	_VRPPRIPVFGT_					0	0	0		ENST00000456318.5_2_3:184080790-184080952:+|nuORF	ENST00000456318.5_2_3:184080790-184080952:+|nuORF	ENST00000456318.5_2_3:184080790-184080952:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.869384765625	2	619.87204	1237.72953	-1.2246	-0.00075909	-2.9733	-0.001843	-4.1979	-0.0026021	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.65746	2	9801	9801;9921		37.812	6.2817	1	6224400			64164	11966	42659	42677	72780;72781	72780					0.1201706431365892
VRPQCLLLVLA	11	Unmodified	_VRPQCLLLVLA_					0	0	0		ENST00000485761.1_1_1:208057818-208072476:-|nuORF;nc|ENSG00000174059|P28906-2|CD34;ENSG00000174059|ENST00000310833|CD34	ENST00000485761.1_1_1:208057818-208072476:-|nuORF	ENST00000485761.1_1_1:208057818-208072476:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	408.9222106933594	3	408.921409	1223.7424	2.7179	0.0011114	-0.69408	-0.00028382	2.0238	0.00082758	408.92110256360985	104.72	4.0561	104.68	103.08	107.14	-0.04039					239	96	4	0	0	0	0.7342	2	11489	11489;11524		28.577	5.9971	1	3838400			64165	6906	42660	42678	72782;72783	72782					0.13947759381539981
VRPQCLLLVLA	11	Unmodified	_VRPQCLLLVLA_					0	0	0		ENST00000485761.1_1_1:208057818-208072476:-|nuORF;nc|ENSG00000174059|P28906-2|CD34;ENSG00000174059|ENST00000310833|CD34	ENST00000485761.1_1_1:208057818-208072476:-|nuORF	ENST00000485761.1_1_1:208057818-208072476:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.9221496582031	3	408.921409	1223.7424	3.1807	0.0013007	-1.0639	-0.00043504	2.1168	0.00086562	408.92095568616344	104.57	4.1233	104.61	103.07	107.19	0.039856					288	98	5	0	0	0	0.7342	1	11383	11383		22.562	7.8679	1	4230400			64166	6906	42660	42678	72784	72784					0.13947759381539981
VRPQCLLLVLA	11	Unmodified	_VRPQCLLLVLA_					0	0	0		ENST00000485761.1_1_1:208057818-208072476:-|nuORF;nc|ENSG00000174059|P28906-2|CD34;ENSG00000174059|ENST00000310833|CD34	ENST00000485761.1_1_1:208057818-208072476:-|nuORF	ENST00000485761.1_1_1:208057818-208072476:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	408.9222412109375	3	408.921409	1223.7424	-1.7912	-0.00073246	3.9558	0.0016176	2.1646	0.00088514	408.92296036119325	104.35	2.8249	104.52	103.85	106.67	0.17096					215	70	5	0	0	0	0.7342	3	11060	11060;11071;11107		35.178	17.48	1	5290200			64167	6906	42660	42678	72785;72786;72787	72785					0.13947759381539981
VRPQCLLLVLA	11	Unmodified	_VRPQCLLLVLA_					0	0	0		ENST00000485761.1_1_1:208057818-208072476:-|nuORF;nc|ENSG00000174059|P28906-2|CD34;ENSG00000174059|ENST00000310833|CD34	ENST00000485761.1_1_1:208057818-208072476:-|nuORF	ENST00000485761.1_1_1:208057818-208072476:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.92218017578125	3	408.921409	1223.7424	0.73412	0.0003002	1.3326	0.00054493	2.0667	0.00084513	408.92190975649805	104.5	3.3645	104.62	103.39	106.76	0.11684					226	83	5	0	0	0	0.6921	3	11082	11070;11082;11094		34.087	22.99	1	4256600			64168	6906	42660	42678	72788;72789;72790	72789					0.13947759381539981
VRPQPASRYGL	11	Unmodified	_VRPQPASRYGL_					0	0	0			REV__ENSG00000204438|ENST00000375896|GPANK1	REV__ENSG00000204438|ENST00000375896|GPANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.34619140625	2	622.348929	1242.6833	-0.2781	-0.00017307	-2.341	-0.0014569	-2.6191	-0.00163	622.3475674365299	96.114	2.8356	96.18	95.181	98.017	0.06591					140	66	3	0	0	0	0.72106	1	10104	10104		28.081	4.5588	1	306120	+		64169	23493	42661	42679	72791	72791					0.07166999411560937
VRPRDLSA	8	Unmodified	_VRPRDLSA_					0	0	0		ENSG00000173868|ENST00000310544|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2638244628906	2	457.264333	912.514114	-1.2803	-0.00058543	1.4305	0.00065413	0.15023	6.8693E-05	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.84341	2	7352	7273;7352		31.955	1.4512	1	812040			64170	6893	42662	42680	72792;72793	72793					0.05435722848858404
VRPRDLSA	8	Unmodified	_VRPRDLSA_					0	0	0		ENSG00000173868|ENST00000310544|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.263671875	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.85277	3	7555	7555;7627;7870		30.504	1.3541	1	2957200			64171	6893	42662	42680	72794;72795;72796	72794					0.05435722848858404
VRPRDLSA	8	Unmodified	_VRPRDLSA_					0	0	0		ENSG00000173868|ENST00000310544|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.26385498046875	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.85277	4	8231	7994;8063;8219;8231		42.474	3.8107	1	4511100			64172	6893	42662	42680	72797;72798;72799;72800	72800					0.05435722848858404
VRPRDLSA	8	Unmodified	_VRPRDLSA_					0	0	0		ENSG00000173868|ENST00000310544|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2633056640625	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.89043	2	8202	8202;8550		37.159	2.1253	1	4885100			64173	6893	42662	42680	72801;72802	72801					0.05435722848858404
VRPRDLSA	8	Unmodified	_VRPRDLSA_					0	0	0		ENSG00000173868|ENST00000310544|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.26385498046875	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.85277	3	7874	7874;7886;8028		25.45	0	1	4732500			64174	6893	42662	42680	72803;72804;72805	72803					0.05435722848858404
VRPRDLSA	8	Unmodified	_VRPRDLSA_					0	0	0		ENSG00000173868|ENST00000310544|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2623291015625	2	457.264333	912.514114	0.57167	0.0002614	-0.53409	-0.00024422	0.037575	1.7182E-05	457.2639546313593	79.583	3.1901	79.721	77.756	80.946	0.13883					318	108	5	0	0	0	0.85277	1	7453	7453		25.45	3.4903	1	1262800			64175	6893	42662	42680	72806	72806					0.05435722848858404
VRPRDLSA	8	Unmodified	_VRPRDLSA_					0	0	0		ENSG00000173868|ENST00000310544|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2639465332031	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.87922	1	8014	8014		31.955	0	1	4597500			64176	6893	42662	42680	72807	72807					0.05435722848858404
VRPRDLSA	8	Unmodified	_VRPRDLSA_					0	0	0		ENSG00000173868|ENST00000310544|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2631530761719	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.86288	3	8100	8001;8025;8100		47.916	0	1	4061400			64177	6893	42662	42680	72808;72809;72810	72810					0.05435722848858404
VRPRDLSA	8	Unmodified	_VRPRDLSA_					0	0	0		ENSG00000173868|ENST00000310544|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.26422119140625	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.87479	2	9541	9541;9638		37.159	0	1	3505500			64178	6893	42662	42680	72811;72812	72811					0.05435722848858404
VRPRDLSA	8	Unmodified	_VRPRDLSA_					0	0	0		ENSG00000173868|ENST00000310544|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1;nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	ENSG00000173868|ENST00000310544|PHOSPHO1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2641296386719	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.85277	3	9515	9515;9527;9599		30.504	3.8107	1	4402400			64179	6893	42662	42680	72813;72814;72815	72813					0.05435722848858404
VRPREGPRGP	10	Unmodified	_VRPREGPRGP_					0	0	0		ENST00000491818.5_1_3:179040900-179041077:+|nuORF;ENST00000496856.5_1_3:179040816-179046072:+|nuORF	ENST00000491818.5_1_3:179040900-179041077:+|nuORF	ENST00000491818.5_1_3:179040900-179041077:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.8201293945312	2	560.820338	1119.62612	0.78776	0.00044179	-1.7346	-0.00097281	-0.94686	-0.00053102	560.8192753742564	92.439	2.8901	92.598	91.192	94.082	0.15874					209	68	4	0	0	0	0.86718	1	9304	9304		27.882	0	1	872010			64180	12692	42663	42681	72816	72816					0.07109576925859074
VRPRHTIQTT	10	Unmodified	_VRPRHTIQTT_					0	0	0			REV__nc|ENSG00000162894|O60667-2|FCMR	REV__nc|ENSG00000162894|O60667-2|FCMR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.8477172851562	2	604.846553	1207.67855	1.0466	0.00063305	-1.6192	-0.00097939	-0.57261	-0.00034634	604.845452875801	96.207	3.1756	96.438	95.308	98.483	0.23103					209	74	4	0	0	0	0.86272	1	9950	9950		24.519	0.31644	1	585990	+		64181	29976	42664	42682	72817	72817					0.08302115268793386
VRPRRLHR	8	Unmodified	_VRPRRLHR_					0	0	0			REV__ENSG00000184574|ENST00000329858|LPAR5	REV__ENSG00000184574|ENST00000329858|LPAR5	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.3165283203125	2	545.346858	1088.67916	2.1818	0.0011899	-3.2113	-0.0017513	-1.0295	-0.00056143	545.3455325478168	90.296	0.21459	90.226	90.09	90.304	-0.069977					6	4	2	0	0	0	0.4196	1	9442	9442		20.482	1.1219	1	52491	+		64182	22693	42665	42683	72818	72818					0.13836999499153535
VRPRSPSA	8	Unmodified	_VRPRSPSA_					0	0	0			REV__ENST00000372583.5_1_1:42049420-42049822:-|nuORF	REV__ENST00000372583.5_1_1:42049420-42049822:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2514953613281	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.85277	3	7308	7308;7391;7412		33.516	1.3541	1	1788100	+		64183	25724	42666	42684	72819;72820;72821	72819					0.04839453677379879
VRPRSPSA	8	Unmodified	_VRPRSPSA_					0	0	0			REV__ENST00000372583.5_1_1:42049420-42049822:-|nuORF	REV__ENST00000372583.5_1_1:42049420-42049822:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	435.2513732910156	2	435.251226	868.487899	-0.16595	-7.2231E-05	0.40152	0.00017476	0.23557	0.00010253	435.25129054948746	79.865	7.8646	79.924	78.028	85.892	0.059357					561	206	4	0	0	0	0.884	1	7793	7793		33.516	0	1	2823900	+		64184	25724	42666	42684	72822	72822					0.04839453677379879
VRPRSPSA	8	Unmodified	_VRPRSPSA_					0	0	0			REV__ENST00000372583.5_1_1:42049420-42049822:-|nuORF	REV__ENST00000372583.5_1_1:42049420-42049822:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.2515563964844	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.85277	2	7891	7826;7891		31.955	0	1	3292300	+		64185	25724	42666	42684	72823;72824	72824					0.04839453677379879
VRPRSPSA	8	Unmodified	_VRPRSPSA_					0	0	0			REV__ENST00000372583.5_1_1:42049420-42049822:-|nuORF	REV__ENST00000372583.5_1_1:42049420-42049822:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25152587890625	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.884	2	7800	7800;7977		33.516	0	1	3370400	+		64186	25724	42666	42684	72825;72826	72825					0.04839453677379879
VRPRSPSA	8	Unmodified	_VRPRSPSA_					0	0	0			REV__ENST00000372583.5_1_1:42049420-42049822:-|nuORF	REV__ENST00000372583.5_1_1:42049420-42049822:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2514953613281	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.85277	3	7460	7460;7510;7745		25.45	0	1	2743300	+		64187	25724	42666	42684	72827;72828;72829	72827					0.04839453677379879
VRPRTLSA	8	Unmodified	_VRPRTLSA_					0	0	0		ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27410888671875	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.87479	1	9675	9675		30.504	0	1	47650000			64188	12376	42667	42685	72830	72830					0.08152313228515595
VRPRTLSA	8	Unmodified	_VRPRTLSA_					0	0	0		ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2744140625	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.8347	1	10037	10037		23.042	0	1	51820000			64189	12376	42667	42685	72831	72831					0.08152313228515595
VRPRTLSA	8	Unmodified	_VRPRTLSA_					0	0	0		ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2734680175781	2	450.274701	898.534849	2.2024	0.00099169	-2.247	-0.0010118	-0.04463	-2.0096E-05	450.2735549573857	97.295	2.0163	97.239	96.672	98.689	-0.055542					92	46	3	0	0	0	0.87479	1	10412	10412		30.504	0	1	395150			64190	12376	42667	42685	72832	72832					0.08152313228515595
VRPRTLSA	8	Unmodified	_VRPRTLSA_					0	0	0		ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2747497558594	2	450.274701	898.534849	1.3233	0.00059587	-2.1643	-0.00097454	-0.84098	-0.00037867	450.27371489456743	92.975	4.3259	93.02	92.411	96.737	0.045456					300	102	6	0	0	0	0.86677	1	9918	9918		27.882	0	1	51698000			64191	12376	42667	42685	72833	72833					0.08152313228515595
VRPRTLSA	8	Unmodified	_VRPRTLSA_					0	0	0		ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.27447509765625	2	450.274701	898.534849	-1.2506	-0.00056311	0.52833	0.00023789	-0.72226	-0.00032522	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.87064	2	9520	9520;9642		29.15	0	1	44812000			64192	12376	42667	42685	72834;72835	72834					0.08152313228515595
VRPRTLSA	8	Unmodified	_VRPRTLSA_					0	0	0		ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	ENST00000478153.1_1_2:217363604-217363871:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2742614746094	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.8347	1	9675	9675		23.042	0	1	41438000			64193	12376	42667	42685	72836	72836					0.08152313228515595
VRPSGGRP	8	Unmodified	_VRPSGGRP_					0	0	0		ENSG00000185950|ENST00000375856|IRS2	ENSG00000185950|ENST00000375856|IRS2	ENSG00000185950|ENST00000375856|IRS2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2378234863281	2	413.238119	824.461684	-1.33	-0.0005496	2.1463	0.00088694	0.81635	0.00033735	413.2387540844748	77.618	3.9388	77.618	76.051	79.99	0					352	161	4	0	0	0	0.89494	1	6969	6969		37.159	1.9584	1	895630			64194	7761	42668	42686	72837	72837					0.04243184505912723
VRPSGGRP	8	Unmodified	_VRPSGGRP_					0	0	0		ENSG00000185950|ENST00000375856|IRS2	ENSG00000185950|ENST00000375856|IRS2	ENSG00000185950|ENST00000375856|IRS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2381286621094	2	413.238119	824.461684	0.52355	0.00021635	1.7521	0.00072405	2.2757	0.0009404	413.2379456484104	77.316	7.4814	77.45	73.667	81.148	0.13478					657	268	4	0	0	0	0.90465	1	7107	7107		40.573	7.057	1	1692300			64195	7761	42668	42686	72838	72838					0.04243184505912723
VRPSGGRP	8	Unmodified	_VRPSGGRP_					0	0	0		ENSG00000185950|ENST00000375856|IRS2	ENSG00000185950|ENST00000375856|IRS2	ENSG00000185950|ENST00000375856|IRS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.236572265625	2	413.238119	824.461684	-1.5467	-0.00063915	3.8402	0.0015869	2.2936	0.00094779	413.2387902903477	77.383	8.7401	77.475	73.809	82.549	0.091438					597	294	4	0	0	0	0.884	1	7011	7011		33.516	6.7195	1	1341700			64196	7761	42668	42686	72839	72839					0.04243184505912723
VRPSKAGAG	9	Unmodified	_VRPSKAGAG_					0	0	0		ENST00000485511.5_2_6:42952321-42952423:+|nuORF	ENST00000485511.5_2_6:42952321-42952423:+|nuORF	ENST00000485511.5_2_6:42952321-42952423:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	421.7467346191406	2	421.745776	841.477	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.15	1	22.215	21.715	22.715	0.064745								0	0	0	0.28386	1	650	650		37.159	0	1				64197	12558	42669	42687	72840	72840					0.04992051303099743
VRPTLQQLRQ	10	Unmodified	_VRPTLQQLRQ_					0	0	0		ENSG00000153303|ENST00000283309|FRMD1;nc|ENSG00000153303|Q8N878-2|FRMD1	ENSG00000153303|ENST00000283309|FRMD1	ENSG00000153303|ENST00000283309|FRMD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8699340820312	2	619.870028	1237.7255	-0.2143	-0.00013284	-0.85851	-0.00053217	-1.0728	-0.000665	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.86047	1	9286	9286		23.523	0	1	1169100			64198	5231	42670	42688	72841	72841					0.11614974819917734
VRPTLQQLRQ	10	Unmodified	_VRPTLQQLRQ_					0	0	0		ENSG00000153303|ENST00000283309|FRMD1;nc|ENSG00000153303|Q8N878-2|FRMD1	ENSG00000153303|ENST00000283309|FRMD1	ENSG00000153303|ENST00000283309|FRMD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8707275390625	2	619.870028	1237.7255	1.7162	0.0010638	-2.4227	-0.0015017	-0.70652	-0.00043795	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.86272	1	11666	11666		24.519	2.5593	1	4719500			64199	5231	42670	42688	72842	72842					0.11614974819917734
VRPTRIQVEPA	11	Unmodified	_VRPTRIQVEPA_					0	0	0			REV__ENST00000448635.2_1_19:17378325-17387315:+|nuORF	REV__ENST00000448635.2_1_19:17378325-17387315:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3690185546875	2	633.369861	1264.72517	-0.087569	-5.5464E-05	-0.98413	-0.00062332	-1.0717	-0.00067878	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.7144	1	9874	9874		29.17	0	1	7059800	+		64200	17534	42671	42689	72843	72843					0.10339555100085818
VRPVDLRSRL	10	Unmodified	_VRPVDLRSRL_					0	0	0		ENST00000526605.5_1_11:110226203-110276990:+|nuORF	ENST00000526605.5_1_11:110226203-110276990:+|nuORF	ENST00000526605.5_1_11:110226203-110276990:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.8724365234375	2	605.872571	1209.73059	-0.046166	-2.7971E-05	-0.84217	-0.00051025	-0.88834	-0.00053822	605.8718844200029	100.18	2.006	100.22	99.762	101.77	0.046349					129	46	5	0	0	0	0.85981	1	10794	10794		35.152	7.0705	1	1666000			64201	13263	42672	42690	72844	72844					0.13411278682565353
VRPVFSVAKIM	11	Unmodified	_VRPVFSVAKIM_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	623.8716430664062	2	623.870651	1245.72675	-0.065769	-4.1031E-05	-0.26384	-0.0001646	-0.32961	-0.00020563	623.8703810158217	104.89	2.4155	104.89	104.43	106.84	0					131	56	4	0	0	0	0.7434	1	10853	10853		23.523	1.8369	1	1348200	+		64202	18336	42673	42691	72845	72845					0.11371472864493626
VRPVIQMTVVP	11	Unmodified	_VRPVIQMTVVP_					0	0	0			REV__ENST00000397843.6_2_11:120302555-120308053:+|nuORF	REV__ENST00000397843.6_2_11:120302555-120308053:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.869384765625	2	619.868108	1237.72166	-0.2143	-0.00013284	2.2388	0.0013877	2.0245	0.0012549	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.73893	1	9330	9330		24.519	0	1	1169100	+		64203	26180	42674	42692	72846	72846					0.11231169001871422
VRPVIQMTVVP	11	Unmodified	_VRPVIQMTVVP_					0	0	0			REV__ENST00000397843.6_2_11:120302555-120308053:+|nuORF	REV__ENST00000397843.6_2_11:120302555-120308053:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8699951171875	2	619.868108	1237.72166	2.311	0.0014325	-0.19048	-0.00011807	2.1205	0.0013145	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.62614	2	10459	10282;10459		41.427	11.109	1	4854700	+		64204	26180	42674	42692	72847;72848	72848					0.11231169001871422
VRPVIQMTVVP	11	Unmodified	_VRPVIQMTVVP_					0	0	0			REV__ENST00000397843.6_2_11:120302555-120308053:+|nuORF	REV__ENST00000397843.6_2_11:120302555-120308053:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	619.8707885742188	2	619.868108	1237.72166	1.7162	0.0010638	0.6746	0.00041816	2.3908	0.001482	619.8683770092267	95.767	4.29	96.187	94.745	99.035	0.42051					329	103	5	0	0	0	0.75921	1	11630	11630		19.997	0	1	4719500	+		64205	26180	42674	42692	72849	72849					0.11231169001871422
VRPVIQMTVVP	11	Unmodified	_VRPVIQMTVVP_					0	0	0			REV__ENST00000397843.6_2_11:120302555-120308053:+|nuORF	REV__ENST00000397843.6_2_11:120302555-120308053:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.869873046875	2	619.868108	1237.72166	1.2588	0.00078029	1.242	0.00076985	2.5008	0.0015501	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.7434	1	11622	11622		23.523	0.48021	1	4742500	+		64206	26180	42674	42692	72850	72850					0.11231169001871422
VRPVRASVPTV	11	Unmodified	_VRPVRASVPTV_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.8663940429688	2	590.861672	1179.70879	3.3796	0.0019969	4.3526	0.0025718	7.7322	0.0045687	590.8644106686297	103.53	3.9249	103.48	103.04	106.96	-0.043755					326	93	6	0	0	0	0.61369	3	11336	11324;11336;11396		42.864	8.6917	1	52150000	+		64207	16141	42675	42693	72851;72852;72853	72852					0.12612473933995716
VRPVVYNK	8	Unmodified	_VRPVVYNK_					0	0	0			REV__ENSG00000165124|ENST00000374469|SVEP1	REV__ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.79095458984375	2	487.792727	973.5709	-1.0481	-0.00051127	-3.1066	-0.0015154	-4.1547	-0.0020267	487.7911324811656	84.566	4.1899	84.566	83.017	87.207	0					299	99	4	0	0	0	0.85277	1	7925	7925		25.45	2.4135	1	1176800	+		64208	21151	42676	42694	72854	72854					0.08305770405377189
VRPVVYNK	8	Unmodified	_VRPVVYNK_					0	0	0			REV__ENSG00000165124|ENST00000374469|SVEP1	REV__ENSG00000165124|ENST00000374469|SVEP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7905578613281	2	487.792727	973.5709	-0.71211	-0.00034736	-3.8761	-0.0018908	-4.5883	-0.0022381	487.7908859659407	82.001	2.8897	82.146	80.367	83.256	0.14513					149	69	3	0	0	0	0.86288	1	7900	7900		26.796	0.10319	1	678280	+		64209	21151	42676	42694	72855	72855					0.08305770405377189
VRQAVRGG	8	Unmodified	_VRQAVRGG_					0	0	0			REV__ENST00000607058.1_1_8:24771141-24771990:-|nuORF	REV__ENST00000607058.1_1_8:24771141-24771990:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	421.75140380859375	2	421.751393	841.488233	2.261	0.00095358	-1.9901	-0.00083933	0.27091	0.00011426	421.75047643231574	77.232	5.0405	77.282	75.025	80.066	0.04969					294	176	3	0	0	0	0.86288	2	7611	7454;7611		33.516	1.5607	1	532850	+		64210	29382	42677	42695	72856;72857	72857					0.06114873397245901
VRQAWPGPRA	10	Unmodified	_VRQAWPGPRA_					0	0	0			REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	569.81787109375	2	569.317432	1136.62031	-0.94139	-0.00053595	-0.34262	-0.00019506	-1.284	-0.00073101	569.3170002119032	62.8	0.37028	62.8	62.607	62.977	0					26	17	2	0	0	0	0.77314	1	5493	5493		40.778	2.9666	1	54189	+		64211	28016	42678	42696	72858	72858					0.057464784141757264
VRQAWPGPRA	10	Unmodified	_VRQAWPGPRA_					0	0	0			REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	569.317432	1136.62031	-0.94139	-0.00053595	-0.34262	-0.00019506	-1.284	-0.00073101	569.3170002119032	62.8	0.37028	62.8	62.607	62.977	0	0.14037	0.00075288	NaN	40.778	26	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54189	+		64212	28016	42678	42696							0.057464784141757264
VRQAWPGPRA	10	Unmodified	_VRQAWPGPRA_					0	0	0			REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	569.317432	1136.62031	0.045817	2.6084E-05	-1.0871	-0.00061888	-1.0412	-0.0005928	569.3166013120871	62.599	0.38114	62.565	62.461	62.842	-0.03371	-0.094563	-9.4772E-05	NaN	40.778	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102140	+		64213	28016	42678	42696							0.057464784141757264
VRQAWPGPRA	10	Unmodified	_VRQAWPGPRA_					0	0	0			REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	REV__ENST00000514480.1_2_4:76439804-76440107:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	569.317432	1136.62031	-0.16941	-9.6447E-05	-1.459	-0.00083061	-1.6284	-0.00092705	569.3165152160278	62.586	0.41368	62.614	62.433	62.846	0.028133	-0.04581	-0.00051822	NaN	40.778	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59668	+		64214	28016	42678	42696							0.057464784141757264
VRQGATQW	8	Unmodified	_VRQGATQW_					0	0	0		ENST00000496539.1_1_7:44157490-44163110:-|nuORF	ENST00000496539.1_1_7:44157490-44163110:-|nuORF	ENST00000496539.1_1_7:44157490-44163110:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.2480773925781	2	473.248683	944.482814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.255	1	38.197	37.697	38.697	-0.057915								0	0	0	0.29353	1	2250	2250		28.254	1.5614	1				64215	12786	42679	42697	72859	72859					0.008351498147703751
VRQHIIFG	8	Unmodified	_VRQHIIFG_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	485.2852783203125	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.411	1	71.541	71.041	72.041	0.1301								0	0	0	0.29353	1	6512	6512		28.254	1.4582	1				64216	1466	42680	42698	72860	72860					0.07004903608185487
VRQKTKGN	8	Unmodified	_VRQKTKGN_					0	0	0			REV__CON__Q148H6	REV__CON__Q148H6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.7776184082031	2	465.777608	929.540663	-0.25577	-0.00011913	0.16818	7.8335E-05	-0.08759	-4.0797E-05	465.77760209373406	79.818	2.8122	79.872	78.136	80.949	0.053841					206	84	4	0	0	0	0.88601	1	7861	7861		34.173	7.4796	1	451640	+	+	64217	15997	42681	42699	72861	72861					0.07307411740180214
VRQKTKGN	8	Unmodified	_VRQKTKGN_					0	0	0			REV__CON__Q148H6	REV__CON__Q148H6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77764892578125	2	465.777608	929.540663	-1.5315	-0.00071332	1.4551	0.00067775	-0.076382	-3.5577E-05	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.87064	1	7720	7720		29.15	1.2673	1	991370	+	+	64218	15997	42681	42699	72862	72862					0.07307411740180214
VRQKTVTK	8	Unmodified	_VRQKTVTK_					0	0	0			REV__ENSG00000174231|ENST00000304992|PRPF8	REV__ENSG00000174231|ENST00000304992|PRPF8	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.31353759765625	2	480.303458	958.592364	1.2398	0.00059548	-2.1948	-0.0010542	-0.95502	-0.0004587	480.30207574879074	20.49	0.72808	20.03	19.595	20.323	-0.4591					19	15	2	0	0	0	0.4196	1	625	625		23.042	1.0826	1	52185	+		64219	21981	42682	42700	72863	72863					0.11141155434086158
VRQLRQVAH	9	Unmodified	_VRQLRQVAH_					0	0	0			REV__ENSG00000122970|ENST00000242591|IFT81	REV__ENSG00000122970|ENST00000242591|IFT81	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8303833007812	2	553.830706	1105.64686	-1.3791	-0.00076379	0.87112	0.00048245	-0.50797	-0.00028133	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.76996	1	10919	10919		33.516	1.9858	1	5911200	+		64220	18522	42683	42701	72864	72864					0.09826167305504896
VRQLRTAS	8	Unmodified	_VRQLRTAS_					0	0	0		ENST00000588822.1_1_17:74723429-74729181:+|nuORF;ENST00000589977.5_1_17:74725800-74729181:+|nuORF;ENST00000590964.5_1_17:74722977-74729181:+|nuORF	ENST00000588822.1_1_17:74723429-74729181:+|nuORF	ENST00000588822.1_1_17:74723429-74729181:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7775573730469	2	465.777608	929.540663	0.52254	0.00024339	-0.63525	-0.00029589	-0.11271	-5.2499E-05	465.77720037387854	81.841	7.81	81.778	78.471	86.281	-0.062935					426	200	4	0	0	0	0.87922	1	8199	8199		31.955	1.4512	1	1330400			64221	14221	42684	42702	72865	72865					0.07307411740180214
VRQLRTAS	8	Unmodified	_VRQLRTAS_					0	0	0		ENST00000588822.1_1_17:74723429-74729181:+|nuORF;ENST00000589977.5_1_17:74725800-74729181:+|nuORF;ENST00000590964.5_1_17:74722977-74729181:+|nuORF	ENST00000588822.1_1_17:74723429-74729181:+|nuORF	ENST00000588822.1_1_17:74723429-74729181:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774963378906	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.734	1	80.674	80.174	81.174	-0.059692								0	0	0	0.2939	1	8123	8123		27.882	0	1				64222	14221	42684	42702	72866	72866					0.07307411740180214
VRQLRTAS	8	Unmodified	_VRQLRTAS_					0	0	0		ENST00000588822.1_1_17:74723429-74729181:+|nuORF;ENST00000589977.5_1_17:74725800-74729181:+|nuORF;ENST00000590964.5_1_17:74722977-74729181:+|nuORF	ENST00000588822.1_1_17:74723429-74729181:+|nuORF	ENST00000588822.1_1_17:74723429-74729181:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.77752685546875	2	465.777608	929.540663	-1.5315	-0.00071332	1.4551	0.00067775	-0.076382	-3.5577E-05	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.88185	1	7770	7770		32.812	2.3088	1	991370			64223	14221	42684	42702	72867	72867					0.07307411740180214
VRQNAHVVH	9	Unmodified	_VRQNAHVVH_					0	0	0			REV__nc|ENSG00000160117|Q8NAG6-1|ANKLE1	REV__nc|ENSG00000160117|Q8NAG6-1|ANKLE1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.8203125	2	530.293956	1058.57336	-0.086571	-4.5908E-05	-0.48877	-0.00025919	-0.57535	-0.0003051	530.2936402106369	80.599	0.7316	80.736	80.448	81.18	0.13702					24	17	2	0	0	0	0.20789	1	7682	7682		17.365	0	1	50499	+		64224	20695	42685	42703	72868	72868					0.0464161886304737
VRQPLIGG	8	Unmodified	_VRQPLIGG_					0	0	0			REV__nc|ENSG00000060237|Q9H4A3-5|WNK1	REV__nc|ENSG00000060237|Q9H4A3-5|WNK1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2744140625	2	420.25852	838.502486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.873	1	45.873	45.373	46.373	0								0	0	0	0.30125	1	3417	3417		20.482	0	1		+		64225	29696	42686	42704	72869	72869					0.0767752582552248
VRQPLRPLR	9	Unmodified	_VRQPLRPLR_					0	0	0			REV__nc|ENSG00000105672|O00321-2|ETV2	REV__nc|ENSG00000105672|O00321-2|ETV2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.144775390625	2	567.864549	1133.71454	-0.39195	-0.00022257	-0.2577	-0.00014634	-0.64965	-0.00036891	568.3662777229679	44.325	1.09	45.169	44.495	45.585	0.84438					30	26	2	0	0	0	0.20789	1	4061	4061		17.365	6.4994	1	208800	+		64226	29759	42687	42705	72870	72870					0.1530361723630449
VRQQGPRVRR	10	Unmodified	_VRQQGPRVRR_					0	0	0		ENSG00000149930|ENST00000308893|TAOK2;nc|ENSG00000149930|Q9UL54-3|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2	ENSG00000149930|ENST00000308893|TAOK2	ENSG00000149930|ENST00000308893|TAOK2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3726196289062	2	626.378886	1250.74322	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.434	1	58.427	57.927	58.927	-0.0074387								0	0	0	0.45132	1	4977	4977		25.574	8.8567	1				64227	5055	42688	42706	72871	72871					0.1278773486544651
VRQRERKPV	9	Unmodified	_VRQRERKPV_					0	0	0		ENST00000371313.2_1_X:119761281-119763842:-|nuORF	ENST00000371313.2_1_X:119761281-119763842:-|nuORF	ENST00000371313.2_1_X:119761281-119763842:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.357177734375	2	584.357088	1166.69962	-0.79353	-0.00046371	-1.1275	-0.00065887	-1.9211	-0.0011226	584.356586051485	92.738	2.8775	92.808	91.472	94.349	0.06987					192	67	3	0	0	0	0.78058	1	9571	9571		30.504	2.6214	1	594900			64228	10662	42689	42707	72872	72872					0.122941253683166
VRQRERKPV	9	Unmodified	_VRQRERKPV_					0	0	0		ENST00000371313.2_1_X:119761281-119763842:-|nuORF	ENST00000371313.2_1_X:119761281-119763842:-|nuORF	ENST00000371313.2_1_X:119761281-119763842:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.3568725585938	2	584.357088	1166.69962	2.1397	0.0012504	-4.0245	-0.0023517	-1.8848	-0.0011014	584.3547865712267	92.649	3.0655	92.585	91.199	94.264	-0.064148					195	72	3	0	0	0	0.7932	1	9800	9800		23.042	0.46283	1	743110			64229	10662	42689	42707	72873	72873					0.122941253683166
VRQRERKPV	9	Unmodified	_VRQRERKPV_					0	0	0		ENST00000371313.2_1_X:119761281-119763842:-|nuORF	ENST00000371313.2_1_X:119761281-119763842:-|nuORF	ENST00000371313.2_1_X:119761281-119763842:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	584.3565063476562	2	584.357088	1166.69962	0.8115	0.00047421	-2.7242	-0.0015919	-1.9127	-0.0011177	584.3555753434755	92.506	2.8121	92.665	91.311	94.123	0.15874					185	66	3	0	0	0	0.7932	1	9340	9340		24.203	4.8428	1	722410			64230	10662	42689	42707	72874	72874					0.122941253683166
VRQRPDLG	8	Unmodified	_VRQRPDLG_					0	0	0		ENSG00000104738|ENST00000649973|MCM4	ENSG00000104738|ENST00000649973|MCM4	ENSG00000104738|ENST00000649973|MCM4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.7696838378906	2	470.769783	939.525013	0.2097	9.8719E-05	-1.7244	-0.0008118	-1.5147	-0.00071309	470.76868671211275	51.093	0.86503	51.845	51.491	52.356	0.75174					55	20	5	0	0	0	0.90465	1	5061	5061		40.573	7.7602	1	3620900			64231	2144	42690	42708	72875	72875					0.05283125223149909
VRQRTSEI	8	Unmodified	_VRQRTSEI_					0	0	0			REV__ENSG00000137809|ENST00000315757|ITGA11	REV__ENSG00000137809|ENST00000315757|ITGA11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7803649902344	2	494.780348	987.546142	-1.0197	-0.00050453	0.84608	0.00041862	-0.17362	-8.5904E-05	494.78063343938777	84.197	2.1372	84.197	83.134	85.271	0					93	51	2	0	0	0	0.89962	1	7886	7886		38.806	8.3025	1	184680	+		64232	19409	42691	42709	72876	72876					0.051870905319901794
VRQTKKTN	8	Unmodified	_VRQTKKTN_					0	0	0			REV__ENST00000440473.5_1_7:76959552-76961247:-|nuORF	REV__ENST00000440473.5_1_7:76959552-76961247:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.7906494140625	2	487.790715	973.566878	-0.085473	-4.1693E-05	-0.089202	-4.3512E-05	-0.17467	-8.5205E-05	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.84341	1	8349	8349		24.203	1.1603	1	1889700	+		64233	26740	42692	42710	72877	72877					0.07903680911658739
VRQTKKTN	8	Unmodified	_VRQTKKTN_					0	0	0			REV__ENST00000440473.5_1_7:76959552-76961247:-|nuORF	REV__ENST00000440473.5_1_7:76959552-76961247:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.7904052734375	2	487.790715	973.566878	-1.5393	-0.00075085	1.3207	0.00064423	-0.21857	-0.00010661	487.79131845420795	84.3	5.2422	84.45	83.193	88.435	0.14952					294	121	4	0	0	0	0.84341	1	8115	8115		24.203	0	1	1760400	+		64234	26740	42692	42710	72878	72878					0.07903680911658739
VRQTKLCTC	9	Unmodified	_VRQTKLCTC_					0	0	0			REV__ENST00000581741.1_1_18:47015913-47016876:-|nuORF	REV__ENST00000581741.1_1_18:47015913-47016876:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3607788085938	2	526.272986	1050.53142	-0.50197	-0.00026417	3.6107	0.0019002	3.1087	0.001636	526.2747334548451	35.399	0.5808	35.405	35.167	35.748	0.0063934					20	12	2	0	0	0	0.20789	1	2256	2256		56.721	23.909	1	94408	+		64235	29052	42693	42711	72879	72879					0.008175590679911693
VRQTQPAL	8	Unmodified	_VRQTQPAL_					0	0	0			REV__ENST00000293443.11_1_17:42436958-42437434:-|nuORF	REV__ENST00000293443.11_1_17:42436958-42437434:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79083251953125	2	456.766709	911.518865	1.4446	0.00065982	-1.6167	-0.00073847	-0.17218	-7.8644E-05	456.76595079359544	36.174	0.78329	36.614	36.372	37.156	0.44043					38	18	4	0	0	0	0.4196	1	2836	2836		42.396	8.2236	1	338210	+		64236	24686	42694	42712	72880	72880					0.05956606991605895
VRQVFAQKLHK	11	Unmodified	_VRQVFAQKLHK_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.94305419921875	3	451.941973	1352.80409	-1.6861	-0.00076203	4.482	0.0020256	2.7959	0.0012636	451.94388668012044	53.795	2.6627	53.795	51.786	54.449	0					235	74	4	0	0	0	0.76892	1	4446	4446		17.833	0.6664	1	792670			64237	1504	42695	42713	72881	72881					0.1417982712500816
VRQVFAQKLHK	11	Unmodified	_VRQVFAQKLHK_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9437561035156	3	451.941973	1352.80409	-0.47573	-0.000215	3.4608	0.0015641	2.9851	0.0013491	451.9434025086026	55.358	2.0218	55.331	54.102	56.123	-0.027275					115	58	3	0	0	0	0.74022	1	5044	5044		24.232	1.6702	1	431630			64238	1504	42695	42713	72882	72882					0.1417982712500816
VRQVFAQKLHK	11	Unmodified	_VRQVFAQKLHK_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9436950683594	3	451.941973	1352.80409	0.028854	1.304E-05	2.8756	0.0012996	2.9044	0.0013126	451.94317886025635	55.354	1.8982	55.384	54.215	56.113	0.029541					139	54	4	0	0	0	0.73621	1	4976	4976		25.126	1.7481	1	513120			64239	1504	42695	42713	72883	72883					0.1417982712500816
VRQVFAQKLHK	11	Unmodified	_VRQVFAQKLHK_					0	0	0		nc|ENSG00000083642|Q9NTI5-2|PDS5B;ENSG00000083642|ENST00000315596|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	nc|ENSG00000083642|Q9NTI5-2|PDS5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.94384765625	3	451.941973	1352.80409	-0.61036	-0.00027585	3.6213	0.0016366	3.0109	0.0013608	451.94349825987973	55.257	1.4276	55.22	54.668	56.095	-0.036823					123	46	4	0	0	0	0.74405	1	4596	4596		23.378	4.1152	1	459960			64240	1504	42695	42713	72884	72884					0.1417982712500816
VRQYKPLFN	9	Unmodified	_VRQYKPLFN_					0	0	0			REV__nc|ENSG00000196562|Q8IWU5-2|SULF2	REV__nc|ENSG00000196562|Q8IWU5-2|SULF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8321533203125	2	582.82984	1163.64513	2.3168	0.0013503	2.518	0.0014676	4.8348	0.0028179	582.8313275695042	94.548	3.2085	94.489	93.331	96.54	-0.059212					184	75	3	0	0	0	0.74721	1	10076	10076		37.159	5.6293	1	663000	+		64241	23146	42696	42714	72885	72885					0.0698511349689852
VRQYKPLFN	9	Unmodified	_VRQYKPLFN_					0	0	0			REV__nc|ENSG00000196562|Q8IWU5-2|SULF2	REV__nc|ENSG00000196562|Q8IWU5-2|SULF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.831298828125	2	582.82984	1163.64513	0.8279	0.00048252	4.0976	0.0023882	4.9254	0.0028707	582.8322150120989	94.225	3.555	94.386	93.365	96.92	0.16119					184	84	3	0	0	0	0.78058	1	9587	9587		30.504	1.3336	1	780120	+		64242	23146	42696	42714	72886	72886					0.0698511349689852
VRRAAPNL	8	Unmodified	_VRRAAPNL_					0	0	0		ENST00000473822.5_1_1:111747063-111747111:-|nuORF	ENST00000473822.5_1_1:111747063-111747111:-|nuORF	ENST00000473822.5_1_1:111747063-111747111:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.7768859863281	2	448.774868	895.535184	0.23966	0.00010755	4.3231	0.0019401	4.5627	0.0020476	448.77664433620475	43.052	1.972	43.023	42.119	44.091	-0.029465					93	47	3	0	0	0	0.87922	1	3243	3243		31.955	7.7521	1	223720			64243	12294	42697	42715	72887	72887					0.08323732948360885
VRRAGAARHR	10	Unmodified	_VRRAGAARHR_					0	0	0		ENST00000374358.4_1_1:25664706-25666969:+|nuORF;ENST00000491936.5_1_1:25664838-25679420:+|nuORF	ENST00000374358.4_1_1:25664706-25666969:+|nuORF	ENST00000374358.4_1_1:25664706-25666969:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.3450927734375	2	575.344846	1148.67514	-0.3799	-0.00021857	1.9692	0.001133	1.5893	0.00091441	575.3459117588899	98.957	2.3582	98.957	98.457	100.82	0					160	56	5	0	0	0	0.86348	1	10046	10046		31.53	3.6476	1	2637800			64244	10776	42698	42716	72888	72888					0.10674910005445781
VRRGEVAL	8	Unmodified	_VRRGEVAL_					0	0	0			REV__nc|ENSG00000126001|Q9BV73-2|CEP250	REV__nc|ENSG00000126001|Q9BV73-2|CEP250	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2743835449219	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.89494	1	9566	9566		37.159	5.2042	1	41438000	+		64245	18690	42699	42717	72889	72889					0.08152313228526964
VRRHSGGP	8	Unmodified	_VRRHSGGP_					0	0	0			REV__ENST00000303277.6_1_4:1718988-1719900:-|nuORF	REV__ENST00000303277.6_1_4:1718988-1719900:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.25494384765625	2	433.241193	864.467832	1.8345	0.00079476	-1.592	-0.00068973	0.24243	0.00010503	433.2390534371368	106.95	0.23205	107.05	106.86	107.09	0.10396					13	7	3	0	0	0	0.4196	1	13014	13014		13.775	0	1	511840	+		64246	24798	42700	42718	72890	72890					0.030177027374293175
VRRLAILKE	9	Unmodified	_VRRLAILKE_					0	0	0		ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN	ENSG00000152818|ENST00000367545|UTRN	ENSG00000152818|ENST00000367545|UTRN	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.3626708984375	2	549.361308	1096.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.814	1	44.826	44.326	45.326	0.012058								0	0	0	0.31828	1	3185	3185		24.203	0	1				64247	5201	42701	42719	72891	72891					0.16357679284942606
VRRLALSE	8	Unmodified	_VRRLALSE_					0	0	0			REV__ENST00000570282.1_1_12:107348804-107349062:-|nuORF	REV__ENST00000570282.1_1_12:107348804-107349062:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28814697265625	2	472.287808	942.561064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.65	1	118.63	118.13	119.13	-0.024208								0	0	0	0.30252	1	13146	13146		19.36	0	1		+		64248	28924	42702	42720	72892	72892					0.0874858239999412
VRRLELTG	8	Unmodified	_VRRLELTG_					0	0	0			REV__ENSG00000170382|ENST00000367177|LRRN2	REV__ENSG00000170382|ENST00000367177|LRRN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.2874450683594	2	472.287808	942.561064	2.0257	0.00095671	-2.3294	-0.0011002	-0.30374	-0.00014345	472.2866481039247	95.307	4.3074	95.25	94.557	98.864	-0.057526					345	100	6	0	0	0	0.85277	1	10409	10409		25.45	0	1	50843000	+		64249	21654	42703	42721	72893	72893					0.0874858239999412
VRRLIEHQL	9	Unmodified	_VRRLIEHQL_					0	0	0			REV__nc|ENSG00000148356|Q6UWE0-3|LRSAM1	REV__nc|ENSG00000148356|Q6UWE0-3|LRSAM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.356689453125	2	582.354014	1162.69348	0.16989	9.8934E-05	-0.87197	-0.0005078	-0.70208	-0.00040886	582.3534866226064	112.82	3.9793	112.85	112.73	116.71	0.028854					153	114	2	0	0	0	0.7932	1	12411	12411		25.574	2.5316	1	635410	+		64250	20111	42704	42722	72894	72894					0.11863607136797327
VRRLIEHQL	9	Unmodified	_VRRLIEHQL_					0	0	0			REV__nc|ENSG00000148356|Q6UWE0-3|LRSAM1	REV__nc|ENSG00000148356|Q6UWE0-3|LRSAM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3540649414062	2	582.354014	1162.69348	-1.3467	-0.00078427	1.84	0.0010716	0.49331	0.00028728	582.3543799246081	113.19	0.23484	113.16	112.99	113.22	-0.032333					15	6	3	0	0	0	0.69624	1	12063	12063		40.778	10.46	1	2714600	+		64251	20111	42704	42722	72895	72895					0.11863607136797327
VRRLPGGG	8	Unmodified	_VRRLPGGG_					0	0	0		ENST00000497505.5_1_2:203879615-203880929:+|nuORF	ENST00000497505.5_1_2:203879615-203880929:+|nuORF	ENST00000497505.5_1_2:203879615-203880929:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2483825683594	2	406.248486	810.48242	1.4359	0.00058334	-0.62428	-0.00025361	0.81164	0.00032973	406.24811193904833	90.886	2.3214	90.819	90.264	92.586	-0.067085					123	55	4	0	0	0	0.87276	1	9571	9571		29.842	4.3914	1	1147600			64252	12808	42705	42723	72896	72896					0.06959774885581282
VRRLQSVLSH	10	Unmodified	_VRRLQSVLSH_					0	0	0			REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8565673828125	2	597.856921	1193.69929	-0.56225	-0.00033615	-0.53243	-0.00031831	-1.0947	-0.00065446	597.8563396796899	92.483	2.8163	92.553	90.724	93.54	0.069862					217	67	4	0	0	0	0.82886	1	9481	9481		37.812	6.2817	1	2042000	+		64253	23119	42706	42724	72897	72897					0.11018705648461946
VRRLRLVAL	9	Unmodified	_VRRLRLVAL_					0	0	0		CON__O76014	CON__O76014	CON__O76014	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3740234375	2	548.377292	1094.74003	-0.93575	-0.00051314	-4.429	-0.0024288	-5.3648	-0.0029419	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.7932	3	2432	2432;2444;2505		26.796	9.4311	1	651720		+	64254	575	42707	42725	72898;72899;72900	72898					0.19645091758752642
VRRPARASPP	10	Unmodified	_VRRPARASPP_					0	0	0			REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8300170898438	2	553.830706	1105.64686	1.7761	0.00098364	-2.9855	-0.0016535	-1.2094	-0.00066981	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.86348	1	9349	9349		31.53	5.9558	1	1628400	+		64255	29147	42708	42726	72901	72901					0.09826167305504896
VRRPARASPP	10	Unmodified	_VRRPARASPP_					0	0	0			REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8300170898438	2	553.830706	1105.64686	2.0416	0.0011307	-3.0404	-0.0016839	-0.99881	-0.00055317	553.8288736002653	90.742	4.6909	90.673	89.568	94.259	-0.069077					378	111	5	0	0	0	0.64457	1	9408	9408		47.657	10.498	1	5457600	+		64256	29147	42708	42726	72902	72902					0.09826167305504896
VRRPARASPP	10	Unmodified	_VRRPARASPP_					0	0	0			REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8296508789062	2	553.830706	1105.64686	1.198	0.00066348	-2.4064	-0.0013328	-1.2084	-0.00066928	553.8292235575452	88.497	2.8821	88.547	86.69	89.573	0.050415					227	67	4	0	0	0	0.77314	2	9158	9146;9158		40.778	8.8233	1	1689700	+		64257	29147	42708	42726	72903;72904	72904					0.09826167305504896
VRRPARASPP	10	Unmodified	_VRRPARASPP_					0	0	0			REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8300170898438	2	553.830706	1105.64686	1.287	0.00071279	-2.2482	-0.0012451	-0.96123	-0.00053236	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.85466	1	9553	9553		20.947	3.582	1	5348100	+		64258	29147	42708	42726	72905	72905					0.09826167305504896
VRRPARASPP	10	Unmodified	_VRRPARASPP_					0	0	0			REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8297119140625	2	553.830706	1105.64686	0.27729	0.00015357	-1.5835	-0.00087697	-1.3062	-0.0007234	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.80179	1	8702	8702		39.253	2.8061	1	1844500	+		64259	29147	42708	42726	72906	72906					0.09826167305504896
VRRPARASPP	10	Unmodified	_VRRPARASPP_					0	0	0			REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8303833007812	2	553.830706	1105.64686	0.28171	0.00015602	-1.2087	-0.0006694	-0.92696	-0.00051338	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.86718	1	9119	9119		27.882	1.1893	1	6402500	+		64260	29147	42708	42726	72907	72907					0.09826167305504896
VRRPARASPP	10	Unmodified	_VRRPARASPP_					0	0	0			REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8299560546875	2	553.830706	1105.64686	0.7451	0.00041266	-1.999	-0.0011071	-1.2539	-0.00069446	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.8608	1	8836	8836		34.173	0	1	2008100	+		64261	29147	42708	42726	72908	72908					0.09826167305504896
VRRPARASPP	10	Unmodified	_VRRPARASPP_					0	0	0			REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8303833007812	2	553.830706	1105.64686	-1.2274	-0.00067979	0.095928	5.3128E-05	-1.1315	-0.00062666	553.8306109759105	88.325	2.8095	88.792	86.99	89.799	0.46664					198	68	4	0	0	0	0.74274	1	10482	10482		42.396	8.2236	1	1825600	+		64262	29147	42708	42726	72909	72909					0.09826167305504896
VRRPARASPP	10	Unmodified	_VRRPARASPP_					0	0	0			REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	REV__ENST00000588791.1_1_17:27442450-27447678:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8302001953125	2	553.830706	1105.64686	-1.3791	-0.00076379	0.87112	0.00048245	-0.50797	-0.00028133	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.8608	1	10864	10864		34.173	3.8548	1	5911200	+		64263	29147	42708	42726	72910	72910					0.09826167305504896
VRRPRRNAAR	10	Unmodified	_VRRPRRNAAR_					0	0	0			REV__ENSG00000138081|ENST00000403359|FBXO11	REV__ENSG00000138081|ENST00000403359|FBXO11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3892822265625	2	626.384503	1250.75445	0.92655	0.00058037	1.8803	0.0011778	2.8069	0.0017582	626.3854005656832	109.98	1.1023	110.05	109.78	110.88	0.073685					78	37	4	0	0	0	0.85694	1	11798	11798		21.96	1.013	1	2583100	+		64264	19438	42709	42727	72911	72911					0.139105569595813
VRRQAKGPPP	10	Unmodified	_VRRQAKGPPP_					0	0	0			REV__ENST00000459638.5_3_3:69591404-69591638:-|nuORF	REV__ENST00000459638.5_3_3:69591404-69591638:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3291015625	2	553.333082	1104.65161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.865	1	98.865	98.365	99.365	0								0	0	0	0.45132	1	9966	9966		23.042	3.0457	1		+		64265	26988	42710	42728	72912	72912					0.10347051448275124
VRRRARAAPR	10	Unmodified	_VRRRARAAPR_					0	0	0		ENST00000530142.5_1_8:145581690-145582740:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6;ENSG00000182325|ENST00000331890|FBXL6	ENST00000530142.5_1_8:145581690-145582740:-|nuORF	ENST00000530142.5_1_8:145581690-145582740:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.5904846191406	3	403.590156	1207.74864	0.45649	0.00018424	-0.098781	-3.9867E-05	0.35771	0.00014437	403.5899247221592	16.197	0.22531	16.173	16.046	16.271	-0.024035					19	9	3	0	0	0	0.85438	1	122	122		11.097	0.99287	1	183800			64266	7447	42711	42729	72913	72913					0.15307458447909994
VRRRFKKRTVS	11	Unmodified	_VRRRFKKRTVS_					0	0	0			REV__nc|ENSG00000161791|Q8IVF7-2|FMNL3	REV__nc|ENSG00000161791|Q8IVF7-2|FMNL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.3026123046875	3	478.303904	1431.88988	-0.10097	-4.8294E-05	-2.0098	-0.00096131	-2.1108	-0.0010096	478.302730378592	67.138	1.0775	67.155	66.828	67.905	0.016205					111	46	4	0	0	0	0.79224	1	6328	6328		12.957	2.8536	1	279890	+		64267	20778	42712	42730	72914	72914					0.1912141203054034
VRRRGLLLL	9	Unmodified	_VRRRGLLLL_					0	0	0			REV__ENSG00000238227|ENST00000418388|TMEM250	REV__ENSG00000238227|ENST00000418388|TMEM250	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	548.3750610351562	2	548.377292	1094.74003	-1.4498	-0.00079504	-4.1619	-0.0022823	-5.6117	-0.0030773	548.3748802153438	35.47	1.1138	35.47	34.867	35.98	0					77	29	3	0	0	0	0.7932	1	2038	2038		18.324	1.8513	1	301910	+		64268	23800	42713	42731	72915	72915					0.1964509175877538
VRRRKWIRYRR	11	Unmodified	_VRRRKWIRYRR_					0	0	0		nc|ENSG00000205356|Q7Z6L1-3|TECPR1;ENSG00000205356|ENST00000447648|TECPR1;nc|ENSG00000205356|Q7Z6L1-2|TECPR1;nc|ENSG00000205356|Q7Z6L1-4|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.17608642578125	4	412.009105	1644.00731	0.29203	0.00012032	-0.63722	-0.00026254	-0.3452	-0.00014222	412.25985548715397	95.141	0.19456	95.561	95.471	95.666	0.41964					6	4	2	0	0	0	0.18421	1	11424	11424		1.4188	1.0473	1	197230			64269	8527	42714	42732	72916	72916					0.21106989689997135
VRRRQRSLEEI	11	Unmodified	_VRRRQRSLEEI_					0	0	0		ENSG00000135929|ENST00000258415|CYP27A1;ENST00000494263.5_1_2:219646839-219678911:+|nuORF	ENSG00000135929|ENST00000258415|CYP27A1	ENSG00000135929|ENST00000258415|CYP27A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.2828063964844	3	481.283057	1440.82734	0.78444	0.00037754	0.031411	1.5117E-05	0.81585	0.00039266	481.2829969862694	102.73	2.2754	102.86	102.06	104.33	0.12622					121	56	3	0	0	0	0.76892	1	10825	10825		17.833	0	1	1192200			64270	4071	42715	42733	72917	72917					0.12456221171737525
VRRRRHLFPKK	11	Unmodified	_VRRRRHLFPKK_					0	0	0			REV__ENSG00000083168|ENST00000265713|KAT6A	REV__ENSG00000083168|ENST00000265713|KAT6A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.65625	3	498.319777	1491.9375	-0.26748	-0.00013329	4.2831	0.0021344	4.0157	0.0020011	498.3218517146112	49.805	1.7523	49.712	48.767	50.519	-0.093178					89	44	3	0	0	0	0.84494	1	3920	3920		6.3209	0.31984	1	158970	+		64271	16848	42716	42734	72918	72918					0.21121111021375327
VRRRRLTSD	9	Unmodified	_VRRRRLTSD_					0	0	0			REV__ENST00000508688.5_1_17:46627722-46628356:+|nuORF	REV__ENST00000508688.5_1_17:46627722-46628356:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	579.8444213867188	2	579.844345	1157.67414	-0.30572	-0.00017727	-0.61957	-0.00035925	-0.92529	-0.00053652	579.8442285460155	102.54	1.4926	102.54	101.62	103.11	0					80	37	4	0	0	0	0.7932	1	10447	10447		21.96	0	1	838830	+		64272	27932	42717	42735	72919	72919					0.10160650845887176
VRRRRLTSD	9	Unmodified	_VRRRRLTSD_					0	0	0			REV__ENST00000508688.5_1_17:46627722-46628356:+|nuORF	REV__ENST00000508688.5_1_17:46627722-46628356:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.843994140625	2	579.844345	1157.67414	0.46014	0.00026681	-0.94249	-0.0005465	-0.48235	-0.00027969	579.8436677237017	102.22	1.1397	102.27	101.85	102.99	0.043198					70	27	3	0	0	0	0.7932	1	11031	11031		26.693	1.1189	1	1168900	+		64273	27932	42717	42735	72920	72920					0.10160650845887176
VRRRRLTSD	9	Unmodified	_VRRRRLTSD_					0	0	0			REV__ENST00000508688.5_1_17:46627722-46628356:+|nuORF	REV__ENST00000508688.5_1_17:46627722-46628356:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	579.8443603515625	2	579.844345	1157.67414	0.88069	0.00051066	-1.3932	-0.00080785	-0.51254	-0.00029719	579.843435527032	102.18	1.0887	102.31	101.93	103.02	0.13523					81	26	4	0	0	0	0.7932	1	10794	10794		16.473	0	1	2076300	+		64274	27932	42717	42735	72921	72921					0.10160650845887176
VRRRRRLVLDP	11	Unmodified	_VRRRRRLVLDP_					0	0	0		ENST00000565752.5_1_16:28962332-28963698:+|nuORF;ENST00000562977.1_1_16:28962332-28970171:+|nuORF;ENSG00000176953|ENST00000320805|NFATC2IP	ENST00000565752.5_1_16:28962332-28963698:+|nuORF	ENST00000565752.5_1_16:28962332-28963698:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.30908203125	3	479.307537	1434.90078	0.025082	1.2022E-05	3.0486	0.0014612	3.0737	0.0014732	479.308928067406	50.56	0.83576	50.558	49.913	50.749	-0.0020447					36	21	2	0	0	0	0.7896	1	4243	4243		13.508	1.0751	1	105480			64275	13923	42718	42736	72922	72922					0.20072814404829842
VRRRRRLVLDP	11	Unmodified	_VRRRRRLVLDP_					0	0	0		ENST00000565752.5_1_16:28962332-28963698:+|nuORF;ENST00000562977.1_1_16:28962332-28970171:+|nuORF;ENSG00000176953|ENST00000320805|NFATC2IP	ENST00000565752.5_1_16:28962332-28963698:+|nuORF	ENST00000565752.5_1_16:28962332-28963698:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3024597167969	3	479.307537	1434.90078	-0.89164	-0.00042737	3.9333	0.0018852	3.0416	0.0014579	479.30938718560907	53.41	0.56715	53.458	53.358	53.925	0.047802					27	19	2	0	0	0	0.77803	1	4410	4410		15.921	1.8346	1	175910			64276	13923	42718	42736	72923	72923					0.20072814404829842
VRRRRRLVLDP	11	Unmodified	_VRRRRRLVLDP_					0	0	0		ENST00000565752.5_1_16:28962332-28963698:+|nuORF;ENST00000562977.1_1_16:28962332-28970171:+|nuORF;ENSG00000176953|ENST00000320805|NFATC2IP	ENST00000565752.5_1_16:28962332-28963698:+|nuORF	ENST00000565752.5_1_16:28962332-28963698:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30877685546875	3	479.307537	1434.90078	-0.26649	-0.00012773	3.4758	0.001666	3.2093	0.0015382	479.3090579994434	48.153	0.74601	48.059	47.737	48.483	-0.093182					32	18	2	0	0	0	0.73647	2	3671	3633;3671		25.068	10.982	1	164470			64277	13923	42718	42736	72924;72925	72925					0.20072814404829842
VRRRRSRLP	9	Unmodified	_VRRRRSRLP_					0	0	0		ENSG00000164061|ENST00000296452|BSN	ENSG00000164061|ENST00000296452|BSN	ENSG00000164061|ENST00000296452|BSN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.3831787109375	2	598.383971	1194.75339	-1.8933	-0.0011329	-2.4056	-0.0014395	-4.2989	-0.0025724	598.3824540468978	41.216	0.8363	41.608	41.379	42.215	0.39209					63	22	3	0	0	0	0.78536	1	3628	3628		29.15	0	1	3237100			64278	5907	42719	42737	72926	72926					0.16380342590696273
VRRSGVTVG	9	Unmodified	_VRRSGVTVG_					0	0	0			REV__ENST00000398027.6_1_7:100026194-100026284:-|nuORF	REV__ENST00000398027.6_1_7:100026194-100026284:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7776794433594	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.9	1	80.03	79.53	80.53	0.13086								0	0	0	0.31437	1	7592	7592		25.574	1.07	1		+		64279	26190	42720	42738	72927	72927					0.07307411740191583
VRRSLAAGT	9	Unmodified	_VRRSLAAGT_					0	0	0		ENST00000264595.6_1_4:178363422-178363623:-|nuORF	ENST00000264595.6_1_4:178363422-178363623:-|nuORF	ENST00000264595.6_1_4:178363422-178363623:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7775573730469	2	465.777608	929.540663	0.60386	0.00028126	-0.75167	-0.00035011	-0.14781	-6.8848E-05	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.77244	1	7805	7805		32.812	0	1	1082300			64280	9481	42721	42739	72928	72928					0.07307411740191583
VRRSLAAGT	9	Unmodified	_VRRSLAAGT_					0	0	0		ENST00000264595.6_1_4:178363422-178363623:-|nuORF	ENST00000264595.6_1_4:178363422-178363623:-|nuORF	ENST00000264595.6_1_4:178363422-178363623:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.77777099609375	2	465.777608	929.540663	-0.22002	-0.00010248	0.31699	0.00014765	0.096969	4.5166E-05	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.69624	1	9396	9396		40.778	5.1599	1	1042300			64281	9481	42721	42739	72929	72929					0.07307411740191583
VRRSVNLS	8	Unmodified	_VRRSVNLS_					0	0	0		nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000133816|O94851-3|MICAL2;ENSG00000133816|ENST00000683283|MICAL2;nc|ENSG00000133816|O94851-2|MICAL2;ENST00000530691.5_1_11:12229562-12281716:+|nuORF;nc|ENSG00000133816|O94851-5|MICAL2;nc|ENSG00000133816|O94851-6|MICAL2;nc|ENSG00000133816|O94851-4|MICAL2	nc|ENSG00000133816|O94851|MICAL2	nc|ENSG00000133816|O94851|MICAL2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7773132324219	2	465.777608	929.540663	-1.2002	-0.00055902	1.1319	0.00052724	-0.068228	-3.1779E-05	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.87064	1	7568	7568		29.15	4.6455	1	683640			64282	14929	42722	42740	72930	72930					0.07307411740191583
VRRTVPEGQII	11	Unmodified	_VRRTVPEGQII_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.87744140625	2	634.377686	1266.74082	-0.13881	-8.8058E-05	-1.1675	-0.00074064	-1.3063	-0.0008287	634.3768707133166	111.34	0.2866	111.28	111.08	111.37	-0.059937					16	8	2	0	0	0	0.55601	1	12112	12112		47.96	7.1814	1	2796400			64283	7613	42723	42741	72931	72931					0.11811841617145546
VRRTVPEGQII	11	Unmodified	_VRRTVPEGQII_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3767700195312	2	634.377686	1266.74082	-0.13788	-8.7468E-05	-0.91051	-0.00057761	-1.0484	-0.00066508	634.3771360107617	113.13	0.47948	113.07	112.78	113.26	-0.067215					34	19	3	0	0	0	0.70737	1	12278	12278		30.318	2.4355	1	68253			64284	7613	42723	42741	72932	72932					0.11811841617145546
VRRTVPEGQII	11	Unmodified	_VRRTVPEGQII_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3765869140625	2	634.377686	1266.74082	1.3188	0.00083664	-1.7871	-0.0011337	-0.46828	-0.00029707	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.638	1	12558	12558		40.058	2.2467	1	12917000			64285	7613	42723	42741	72933	72933					0.11811841617145546
VRRTVPEGQII	11	Unmodified	_VRRTVPEGQII_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3761596679688	2	634.377686	1266.74082	0.93391	0.00059245	-2.112	-0.0013398	-1.1781	-0.00074736	634.3762099028429	112.22	0.2012	112.29	112.11	112.31	0.066025					17	6	3	0	0	0	0.70737	1	12081	12081		30.318	3.2704	1	745330			64286	7613	42723	42741	72934	72934					0.11811841617145546
VRRTVPEGQII	11	Unmodified	_VRRTVPEGQII_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3772583007812	2	634.377686	1266.74082	0.93389	0.00059244	-1.6875	-0.0010705	-0.7536	-0.00047806	634.3765130028539	118.8	0.2215	118.86	118.79	119.01	0.060577					18	8	3	0	0	0	0.7434	1	12485	12485		23.523	0	1	457870			64287	7613	42723	42741	72935	72935					0.11811841617145546
VRRTVPEGQII	11	Unmodified	_VRRTVPEGQII_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8782348632812	2	634.377686	1266.74082	-1.1774	-0.00074689	0.2391	0.00015168	-0.93826	-0.00059521	634.3776925529805	109.87	1.6182	109.87	109.32	110.94	0.0060425					148	63	3	0	0	0	0.72106	1	11814	11814		28.081	2.5074	1	2778200			64288	7613	42723	42741	72936	72936					0.11811841617145546
VRRTVPEGQII	11	Unmodified	_VRRTVPEGQII_					0	0	0		ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3746948242188	2	634.377686	1266.74082	2.1873	0.0013876	-2.6623	-0.0016889	-0.47502	-0.00030134	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.638	2	13438	13397;13438		40.058	1.3046	1	6886400			64289	7613	42723	42741	72937;72938	72938					0.11811841617145546
VRRTWRRRRRM	11	Unmodified	_VRRTWRRRRRM_					0	0	0			REV__ENST00000281708.8_1_4:153271275-153332654:-|nuORF	REV__ENST00000281708.8_1_4:153271275-153332654:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.5657958984375	4	407.995834	1627.95423	0.1013	4.133E-05	1.8973	0.00077408	1.9986	0.00081541	407.99636240479424	59.629	0.44848	60.02	59.727	60.175	0.39077					19	10	3	0	0	0	0.18372	1	6271	6271		3.4087	3.0373	1	132950	+		64290	24607	42724	42742	72939	72939					0.16537288635663572
VRRVVEEV	8	Unmodified	_VRRVVEEV_					0	0	0		nc|ENSG00000144908|O75891-2|ALDH1L1;ENSG00000144908|ENST00000393434|ALDH1L1;nc|ENSG00000144908|O75891-3|ALDH1L1;ENST00000467370.5_1_3:125824416-125834086:-|nuORF	nc|ENSG00000144908|O75891-2|ALDH1L1	nc|ENSG00000144908|O75891-2|ALDH1L1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.98358154296875	2	493.293091	984.571629	-0.70061	-0.0003456	2.7361	0.0013497	2.0355	0.0010041	493.2947455213578	45.005	0.21636	45.017	44.855	45.071	0.012058					5	4	2	0	0	0	0.4196	1	3197	3197		29.15	2.3535	1	53679			64291	4743	42725	42743	72940	72940					0.07872565054435654
VRRWGPGG	8	Unmodified	_VRRWGPGG_					0	0	0		ENST00000488132.5_1_3:98437266-98451455:-|nuORF	ENST00000488132.5_1_3:98437266-98451455:-|nuORF	ENST00000488132.5_1_3:98437266-98451455:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7447509765625	2	442.746111	883.477669	0.39735	0.00017592	-3.3438	-0.0014805	-2.9465	-0.0013045	442.74450802650625	89.278	0.7365	89.729	89.448	90.184	0.45058					60	17	4	0	0	0	0.90024	1	10555	10555		39.021	0.21535	1	3535200			64292	12617	42726	42744	72941	72941					0.03126890742817068
VRRWGRRRRR	10	Unmodified	_VRRWGRRRRR_					0	0	0			REV__nc|ENSG00000109685|O96028-4|NSD2	REV__nc|ENSG00000109685|O96028-4|NSD2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2453308105469	3	485.303121	1452.88753	0.070137	3.4038E-05	-1.4105	-0.00068453	-1.3404	-0.0006505	485.30236140307204	17.127	0.40417	16.516	16.348	16.752	-0.6107					12	8	2	0	0	0	0.37624	1	218	218		14.694	2.7613	1	46279	+		64293	17768	42727	42745	72942	72942					0.17920421136091136
VRRWGRRRRR	10	Unmodified	_VRRWGRRRRR_					0	0	0			REV__nc|ENSG00000109685|O96028-4|NSD2	REV__nc|ENSG00000109685|O96028-4|NSD2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	485.303121	1452.88753	-0.29182	-0.00014162	-0.90822	-0.00044076	-1.2	-0.00058238	485.30268724197236	16.712	0.34562	16.633	16.489	16.834	-0.079056	0.059569	0.00086602	NaN	14.694	35	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	158560	+		64294	17768	42727	42745							0.17920421136091136
VRRWGRRRRR	10	Unmodified	_VRRWGRRRRR_					0	0	0			REV__nc|ENSG00000109685|O96028-4|NSD2	REV__nc|ENSG00000109685|O96028-4|NSD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	485.303121	1452.88753	-0.86358	-0.0004191	0.31425	0.00015251	-0.54933	-0.00026659	485.3032003280392	16.511	0.20651	16.558	16.459	16.666	0.047804	-0.015038	0.0026458	NaN	14.694	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57592	+		64295	17768	42727	42745							0.17920421136091136
VRRWGRRRRR	10	Unmodified	_VRRWGRRRRR_					0	0	0			REV__nc|ENSG00000109685|O96028-4|NSD2	REV__nc|ENSG00000109685|O96028-4|NSD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	485.303121	1452.88753	0.066955	3.2493E-05	-0.87653	-0.00042538	-0.80957	-0.00039289	485.30264836111604	16.491	0.19452	16.551	16.462	16.656	0.059269	-0.022614	0.00091216	NaN	14.694	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91677	+		64296	17768	42727	42745							0.17920421136091136
VRRWGRRRRR	10	Unmodified	_VRRWGRRRRR_					0	0	0			REV__nc|ENSG00000109685|O96028-4|NSD2	REV__nc|ENSG00000109685|O96028-4|NSD2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	485.303121	1452.88753	0.72203	0.0003504	-2.0916	-0.0010151	-1.3696	-0.00066468	485.30202875752974	16.6	0.25534	16.576	16.439	16.695	-0.024035	0.0023502	-0.00085693	NaN	14.694	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65932	+		64297	17768	42727	42745							0.17920421136091136
VRRWGRRRRR	10	Unmodified	_VRRWGRRRRR_					0	0	0			REV__nc|ENSG00000109685|O96028-4|NSD2	REV__nc|ENSG00000109685|O96028-4|NSD2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	485.303121	1452.88753	0.60928	0.00029568	-1.9845	-0.00096308	-1.3752	-0.00066739	485.3021257005835	17.052	0.30462	16.57	16.457	16.761	-0.48256	-0.0035081	-0.00070092	NaN	14.694	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45669	+		64298	17768	42727	42745							0.17920421136091136
VRRWRRVPRVI	11	Unmodified	_VRRWRRVPRVI_					0	0	0			REV__nc|ENSG00000159322|Q9BRR6-6|ADPGK	REV__nc|ENSG00000159322|Q9BRR6-6|ADPGK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.32379150390625	3	498.319777	1491.9375	0.13724	6.839E-05	4.2966	0.0021411	4.4339	0.0022095	498.32177331846043	48.036	0.81947	48.026	47.738	48.558	-0.0093269					56	22	3	0	0	0	0.7896	1	3936	3936		13.508	0	1	255790	+		64299	20653	42728	42746	72943	72943					0.21121111021375327
VRRWRRVPRVI	11	Unmodified	_VRRWRRVPRVI_					0	0	0			REV__nc|ENSG00000159322|Q9BRR6-6|ADPGK	REV__nc|ENSG00000159322|Q9BRR6-6|ADPGK	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.7956848144531	3	498.319777	1491.9375	0.13724	6.839E-05	4.2966	0.0021411	4.4339	0.0022095	498.32177331846043	48.036	0.81947	48.026	47.738	48.558	-0.0093269					56	22	3	0	0	0	0.18318	1	3976	3976		3.2113	0	1	255790	+		64300	20653	42728	42746	72944	72944					0.21121111021375327
VRRWRRVPRVI	11	Unmodified	_VRRWRRVPRVI_					0	0	0			REV__nc|ENSG00000159322|Q9BRR6-6|ADPGK	REV__nc|ENSG00000159322|Q9BRR6-6|ADPGK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.32208251953125	3	498.319777	1491.9375	0.34098	0.00016992	3.7341	0.0018608	4.0751	0.0020307	498.3215489235199	49.794	1.8345	49.837	48.67	50.505	0.04224					99	45	3	0	0	0	0.7896	1	3876	3876		13.508	7.1871	1	194850	+		64301	20653	42728	42746	72945	72945					0.21121111021375327
VRRYDLYKQKV	11	Unmodified	_VRRYDLYKQKV_					0	0	0			REV__ENSG00000179222|ENST00000326587|MAGED1	REV__ENSG00000179222|ENST00000326587|MAGED1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	489.9540100097656	3	489.952537	1466.83578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.596	1	62.717	62.217	63.217	0.1209								0	0	0	0.56276	1	5460	5460		18.531	0.69791	1		+		64302	22326	42729	42747	72946	72946					0.121037750882806
VRSALLALYT	10	Unmodified	_VRSALLALYT_					0	0	0		ENST00000512630.5_1_4:143007384-143094853:-|nuORF;ENSG00000109452|ENST00000262992|INPP4B	ENST00000512630.5_1_4:143007384-143094853:-|nuORF	ENST00000512630.5_1_4:143007384-143094853:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.830078125	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.86763	1	8767	8767		26.693	1.1189	1	3935500			64303	2462	42730	42748	72947	72947					0.10094577919812764
VRSALLALYT	10	Unmodified	_VRSALLALYT_					0	0	0		ENST00000512630.5_1_4:143007384-143094853:-|nuORF;ENSG00000109452|ENST00000262992|INPP4B	ENST00000512630.5_1_4:143007384-143094853:-|nuORF	ENST00000512630.5_1_4:143007384-143094853:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.830078125	2	553.832049	1105.64954	0.76565	0.00042404	-4.0998	-0.0022706	-3.3341	-0.0018465	553.829631074532	90.508	4.4636	90.662	89.614	94.078	0.15388					363	106	5	0	0	0	0.86218	1	9074	9074		32.812	1.2826	1	6029400			64304	2462	42730	42748	72948	72948					0.10094577919812764
VRSALRKQ	8	Unmodified	_VRSALRKQ_					0	0	0			REV__ENST00000418154.1_1_1:64254543-64254969:-|nuORF	REV__ENST00000418154.1_1_1:64254543-64254969:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.3035888671875	2	479.30125	956.587947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.1	1	109.22	108.72	109.72	0.12289								0	0	0	0.29978	1	11756	11756		21.96	0	1		+		64305	26454	42731	42749	72949	72949					0.10791691011183957
VRSDPVKPLVR	11	Unmodified	_VRSDPVKPLVR_					0	0	0			REV__nc|ENSG00000187741|O15360-3|FANCA	REV__nc|ENSG00000187741|O15360-3|FANCA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.9278869628906	3	422.594461	1264.76155	-0.16567	-7.0011E-05	-4.2769	-0.0018074	-4.4425	-0.0018774	422.5925259842464	56.998	1.611	56.986	56.609	58.22	-0.012203					120	57	3	0	0	0	0.74771	1	5117	5117		22.562	0	1	338630	+		64306	22940	42732	42750	72950	72950					0.13976431996775318
VRSGGPLNEVI	11	Unmodified	_VRSGGPLNEVI_					0	0	0			REV__ENSG00000083857|ENST00000441802|FAT1	REV__ENSG00000083857|ENST00000441802|FAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	570.825439453125	2	570.822212	1139.62987	0.47648	0.00027199	3.3136	0.0018915	3.7901	0.0021635	570.824103297056	61.379	0.88304	61.486	61.341	62.225	0.10743					65	40	2	0	0	0	0.65746	1	5366	5366		37.812	1.3648	1	1285800	+		64307	16864	42733	42751	72951	72951					0.06564201909031908
VRSLETNKRKL	11	Unmodified	_VRSLETNKRKL_					0	0	0		ENST00000411618.1_1_9:30800375-30800732:-|nuORF	ENST00000411618.1_1_9:30800375-30800732:-|nuORF	ENST00000411618.1_1_9:30800375-30800732:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.60931396484375	3	448.60877	1342.80448	0.51937	0.00023299	0.80521	0.00036122	1.3246	0.00059422	448.6089579752084	75.063	1.1228	75.195	74.637	75.76	0.13208					79	31	3	0	0	0	0.78083	1	6977	6977		15.337	0	1	398900			64308	11329	42734	42752	72952	72952					0.14679202054207963
VRSLFRTLR	9	Unmodified	_VRSLFRTLR_					0	0	0			REV__ENSG00000110092|ENST00000227507|CCND1	REV__ENSG00000110092|ENST00000227507|CCND1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.3570556640625	2	574.356557	1146.69856	0.86563	0.00049718	-1.9833	-0.0011391	-1.1176	-0.00064191	574.3552739338568	99.781	2.6781	99.932	98.182	100.86	0.15073					107	61	3	0	0	0	0.78983	1	10390	10390		27.882	0	1	245470	+		64309	17796	42735	42753	72953	72953					0.13107910999406158
VRSNQMDEAE	10	Oxidation (M)	_VRSNQM(Oxidation (M))DEAE_		VRSNQM(1)DEAE		VRSNQM(46)DEAE	0	0	1		ENSG00000168676|ENST00000304372|KCTD19	ENSG00000168676|ENST00000304372|KCTD19	ENSG00000168676|ENST00000304372|KCTD19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.7538452148438	2	597.756409	1193.49827	-0.1698	-0.0001015	-2.4337	-0.0014548	-2.6035	-0.0015563	597.7548260397939	73.715	1.5956	74.274	74.024	75.62	0.55891					69	38	4	0	0	0	0.67571	1	8338	8338		45.972	10.82	1	1057500			64310	6424	42736	42754	72954	72954		109			-0.09074396241021532
VRSQEQSKK	9	Unmodified	_VRSQEQSKK_					0	0	0			REV__ENST00000465132.1_1_7:99048413-99050258:+|nuORF	REV__ENST00000465132.1_1_7:99048413-99050258:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3063354492188	2	545.304187	1088.59382	-0.14303	-7.7996E-05	3.4446	0.0018783	3.3015	0.0018003	545.3060632440186	24.601	1.8516	24.273	23.461	25.312	-0.32825					98	41	5	0	0	0	0.6204	1	1157	1157		45.972	8.8131	1	6005700	+		64311	27105	42737	42755	72955	72955					0.053067447322064254
VRSRCAPS	8	Unmodified	_VRSRCAPS_					0	0	0		ENST00000262878.4_1_20:35579850-35580000:-|nuORF	ENST00000262878.4_1_20:35579850-35580000:-|nuORF	ENST00000262878.4_1_20:35579850-35580000:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2655029296875	2	438.229436	874.44432	-0.31219	-0.00013681	4.2734	0.0018727	3.9612	0.0017359	438.23158289725535	26.418	0.26827	26.16	25.946	26.214	-0.25721					10	5	3	0	0	0	0.4196	1	1439	1439		29.15	12.676	1	23320			64312	9448	42738	42756	72956	72956					0.0020752090858877636
VRSRTPGP	8	Unmodified	_VRSRTPGP_					0	0	0			REV__ENST00000467312.1_1_9:131486146-131486272:-|nuORF	REV__ENST00000467312.1_1_9:131486146-131486272:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	435.2517395019531	2	435.251226	868.487899	0.25164	0.00010953	-0.069554	-3.0273E-05	0.18208	7.9252E-05	435.25108773839196	79.555	5.0905	80.104	78.728	83.819	0.54945					300	122	4	0	0	0	0.91472	1	9203	9203		44.117	3.5442	1	2235800	+		64313	27155	42739	42757	72957	72957					0.04839453677379879
VRSRVQHKP	9	Unmodified	_VRSRVQHKP_					0	0	0		nc|ENSG00000187091|P51178-2|PLCD1;ENSG00000187091|ENST00000334661|PLCD1;ENST00000461445.5_1_3:38051140-38051556:-|nuORF	nc|ENSG00000187091|P51178-2|PLCD1	nc|ENSG00000187091|P51178-2|PLCD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8309326171875	2	553.830706	1105.64686	0.85523	0.00047365	-1.3747	-0.00076136	-0.51949	-0.00028771	553.8298333755482	102.43	0.63957	102.57	102.26	102.9	0.13523					38	15	3	0	0	0	0.7932	1	10778	10778		21.96	2.5999	1	443280			64314	7838	42740	42758	72958	72958					0.09826167305527633
VRSSPSPSL	9	Unmodified	_VRSSPSPSL_					0	0	0			REV__ENST00000504788.5_1_5:126112928-126171953:+|nuORF	REV__ENST00000504788.5_1_5:126112928-126171953:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.77740478515625	2	465.256174	928.497795	-0.050643	-2.3562E-05	2.5154	0.0011703	2.4647	0.0011467	465.2564872330572	82.32	0.48181	82.379	82.207	82.689	0.059166					14	10	2	0	0	0	0.20789	1	8238	8238		58.782	27.252	1	61551	+		64315	17992	42741	42759	72959	72959					0.03068596892092046
VRSVTLSPLVP	11	Unmodified	_VRSVTLSPLVP_					0	0	0			REV__ENSG00000166455|ENST00000299578|C16orf46	REV__ENSG00000166455|ENST00000299578|C16orf46	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	584.3568115234375	2	584.358431	1166.70231	-0.79353	-0.00046371	-3.4252	-0.0020015	-4.2187	-0.0024653	584.356586051485	92.738	2.8775	92.808	91.472	94.349	0.06987					192	67	3	0	0	0	0.72918	1	9547	9547		26.693	7.5894	1	594900	+		64316	21297	42742	42760	72960	72960					0.1256253598260173
VRTANPGVN	9	Unmodified	_VRTANPGVN_					0	0	0			REV__nc|ENSG00000124159|O95460-4|MATN4	REV__nc|ENSG00000124159|O95460-4|MATN4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.253662109375	2	464.253966	926.493378	-0.12089	-5.6125E-05	0.24861	0.00011542	0.12772	5.9293E-05	464.2539796144497	84.014	8.1325	84.081	79.526	87.658	0.066727					435	201	4	0	0	0	0.51307	2	8321	8321;8475		51.335	4.569	1	1449300	+		64317	15776	42743	42761	72961;72962	72961					0.027191324691898444
VRTGTARI	8	Unmodified	_VRTGTARI_					0	0	0		nc|ENSG00000253159|O60330-2|PCDHGA12;ENSG00000253159|ENST00000252085|PCDHGA12	nc|ENSG00000253159|O60330-2|PCDHGA12	nc|ENSG00000253159|O60330-2|PCDHGA12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2651062011719	2	437.266876	872.519199	-0.36504	-0.00015962	-2.3712	-0.0010368	-2.7362	-0.0011965	437.26586526342743	24.481	2.1662	24.435	23.762	25.928	-0.04598					146	53	5	0	0	0	0.87479	1	1077	1077		30.504	2.2494	1	1300600			64318	8854	42744	42762	72963	72963					0.0778402671146523
VRTKNPKG	8	Unmodified	_VRTKNPKG_					0	0	0			REV__ENST00000468671.1_1_16:12975152-12975290:+|nuORF	REV__ENST00000468671.1_1_16:12975152-12975290:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2739562988281	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.49	1	112.47	111.97	112.97	-0.025414								0	0	0	0.29264	1	12432	12432		29.15	0	1		+		64319	22559	42745	42763	72964	72964					0.08152313228515595
VRTLLQPVSRN	11	Unmodified	_VRTLLQPVSRN_					0	0	0		ENST00000414066.1_1_10:38108659-38108740:-|nuORF	ENST00000414066.1_1_10:38108659-38108740:-|nuORF	ENST00000414066.1_1_10:38108659-38108740:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.882080078125	2	641.883136	1281.75172	1.6835	0.0010806	-2.7242	-0.0017486	-1.0407	-0.00066802	641.8812254430574	95.773	2.4493	95.82	94.333	96.782	0.046989					202	57	5	0	0	0	0.68532	1	10200	10200		33.922	2.3918	1	1550900			64320	11359	42746	42764	72965	72965					0.12211243991418996
VRTLVSQPKMA	11	Unmodified	_VRTLVSQPKMA_					0	0	0			REV__nc|ENSG00000104067|Q07157-2|TJP1	REV__nc|ENSG00000104067|Q07157-2|TJP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	615.3579711914062	2	615.355365	1228.69618	3.0577	0.0018815	0.25067	0.00015425	3.3083	0.0020358	615.3555264925384	104.67	2.1648	104.63	104.19	106.35	-0.04039					150	51	4	0	0	0	0.7144	1	11554	11554		29.17	1.0886	1	2045600	+		64321	17434	42747	42765	72966	72966					0.09097694479441998
VRTLVSQPKMA	11	Unmodified	_VRTLVSQPKMA_					0	0	0			REV__nc|ENSG00000104067|Q07157-2|TJP1	REV__nc|ENSG00000104067|Q07157-2|TJP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	615.3573608398438	2	615.355365	1228.69618	1.2106	0.00074497	2.3324	0.0014353	3.543	0.0021802	615.3568978915573	104.33	3.2029	104.5	103.73	106.93	0.17096					209	79	4	0	0	0	0.64498	1	11084	11084		39.253	11.171	1	3137500	+		64322	17434	42747	42765	72967	72967					0.09097694479441998
VRTRSVGV	8	Unmodified	_VRTRSVGV_					0	0	0		ENSG00000168916|ENST00000513986|ZNF608;ENST00000503896.6_1_5:123979291-124080034:-|nuORF;ENSG00000180357|ENST00000326648|ZNF609	ENSG00000168916|ENST00000513986|ZNF608;ENSG00000180357|ENST00000326648|ZNF609	ENSG00000180357|ENST00000326648|ZNF609	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.7682189941406	2	437.266876	872.519199	0.089398	3.9091E-05	-2.6709	-0.0011679	-2.5815	-0.0011288	437.26561767206454	28.999	0.99977	29.111	28.354	29.354	0.11225					70	52	2	0	0	0	0.87479	1	1201	1201		30.504	1.3541	1	59113			64323	6449;7328	42748	42766	72968	72968					0.07784026711476599
VRTRSVGV	8	Unmodified	_VRTRSVGV_					0	0	0		ENSG00000168916|ENST00000513986|ZNF608;ENST00000503896.6_1_5:123979291-124080034:-|nuORF;ENSG00000180357|ENST00000326648|ZNF609	ENSG00000168916|ENST00000513986|ZNF608;ENSG00000180357|ENST00000326648|ZNF609	ENSG00000180357|ENST00000326648|ZNF609	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	437.266876	872.519199	-1.6161	-0.00070666	-0.72838	-0.0003185	-2.3445	-0.0010252	437.26645630012786	29.353	0.43309	29.42	29.078	29.511	0.066727	0.16473	0.0012549	NaN	30.504	37	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70218			64324	6449;7328	42748	42766							0.07784026711476599
VRTRTGYLEQG	11	Unmodified	_VRTRTGYLEQG_					0	0	0		ENSG00000198515|ENST00000514170|CNGA1	ENSG00000198515|ENST00000514170|CNGA1	ENSG00000198515|ENST00000514170|CNGA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3464965820312	2	640.341301	1278.66805	4.3956	0.0028147	4.0493	0.0025929	8.4449	0.0054076	640.343646089099	102.73	0.67924	103.03	102.81	103.49	0.29865					86	22	4	0	0	0	0.60058	1	12528	12528		44.377	2.9506	1	12674000			64325	8280	42749	42767	72969	72969					0.0398608782370502
VRTRTGYLEQG	11	Unmodified	_VRTRTGYLEQG_					0	0	0		ENSG00000198515|ENST00000514170|CNGA1	ENSG00000198515|ENST00000514170|CNGA1	ENSG00000198515|ENST00000514170|CNGA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.347412109375	2	640.341301	1278.66805	4.5976	0.002944	3.7635	0.0024099	8.3611	0.005354	640.3436898921979	103.43	0.74184	103.69	103.46	104.2	0.26524					50	17	4	0	0	0	0.14238	2	12628	12615;12628		82.75	17.285	1	7001000			64326	8280	42749	42767	72970;72971	72971					0.0398608782370502
VRTRTGYLEQG	11	Unmodified	_VRTRTGYLEQG_					0	0	0		ENSG00000198515|ENST00000514170|CNGA1	ENSG00000198515|ENST00000514170|CNGA1	ENSG00000198515|ENST00000514170|CNGA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	640.341301	1278.66805	2.7235	0.001744	6.4199	0.004111	9.1435	0.0058549	640.8470420114193	103.61	0.47487	103.57	103.37	103.84	-0.043755	-0.062269	-0.0011433	NaN	82.75	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	308560			64327	8280	42749	42767							0.0398608782370502
VRTRTGYLEQG	11	Unmodified	_VRTRTGYLEQG_					0	0	0		ENSG00000198515|ENST00000514170|CNGA1	ENSG00000198515|ENST00000514170|CNGA1	ENSG00000198515|ENST00000514170|CNGA1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	640.341301	1278.66805	1.6003	0.0010247	7.5075	0.0048074	9.1078	0.0058321	640.3459927273026	103.47	0.39162	103.51	103.32	103.71	0.041481	-0.11826	0.00024959	NaN	82.75	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252160			64328	8280	42749	42767							0.0398608782370502
VRTVGHTTT	9	Unmodified	_VRTVGHTTT_					0	0	0		ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.2665710449219	2	486.267073	970.519593	-1.0938	-0.00053186	1.2715	0.00061828	0.17773	8.6424E-05	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.76255	1	9003	9003		35.618	0.41757	1	1852700			64329	4077	42750	42768	72972	72972					0.03315401640657001
VRTWAPLA	8	Unmodified	_VRTWAPLA_					0	0	0		ENST00000542359.5_1_11:63776517-63933244:-|nuORF;ENST00000538595.1_1_11:63916459-63933466:-|nuORF;ENST00000545464.5_1_11:63767582-63933466:-|nuORF;ENSG00000133315|ENST00000255681|MACROD1	ENST00000542359.5_1_11:63776517-63933244:-|nuORF	ENST00000542359.5_1_11:63776517-63933244:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2633056640625	2	457.266345	912.518136	-1.2803	-0.00058543	-2.9682	-0.0013572	-4.2485	-0.0019427	457.26482557075917	79.85	2.9216	79.85	78.177	81.098	0					299	107	5	0	0	0	0.86288	1	7483	7483		26.796	0	1	812040			64330	3872	42751	42769	72973	72973					0.05837812342554116
VRVAKRPKV	9	Unmodified	_VRVAKRPKV_					0	0	0			REV__nc|ENSG00000077279|O43602-2|DCX	REV__nc|ENSG00000077279|O43602-2|DCX	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8084716796875	2	526.856193	1051.69783	2.1153	0.0011145	-2.7232	-0.0014347	-0.60788	-0.00032027	527.3547714325955	99.783	0.24279	100.12	99.935	100.18	0.33295					7	5	2	0	0	0	0.20789	1	12064	12064		21.96	1.4781	1	64711	+		64331	16744	42752	42770	72974	72974					0.1740511635034636
VRVEMEER	8	Unmodified	_VRVEMEER_					0	0	0			REV__nc|ENSG00000067955|Q13951|CBFB	REV__nc|ENSG00000067955|Q13951|CBFB	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.8270874023438	2	524.266216	1046.51788	-0.14034	-7.3578E-05	0.23654	0.00012401	0.096199	5.0434E-05	524.7696897527654	99.431	0.16852	99.653	99.53	99.698	0.22263					5	3	2	0	0	0	0.4196	1	10361	10361		37.159	1.5408	1	15568	+		64332	29703	42753	42771	72975	72975					-0.0035197543959384348
VRVGKMWIT	9	Unmodified	_VRVGKMWIT_					0	0	0		ENST00000373242.6_1_10:71910666-71910756:-|nuORF	ENST00000373242.6_1_10:71910666-71910756:-|nuORF	ENST00000373242.6_1_10:71910666-71910756:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	544.3328247070312	2	545.315512	1088.61647	0.81639	0.00044519	1.3119	0.00071541	2.1283	0.0011606	545.3160909782349	97.8	1.7095	97.961	96.659	98.369	0.16073					64	39	2	0	0	0	0.20789	1	10184	10184		29.15	11.785	1	126800			64333	10735	42754	42772	72976	72976					0.07570672596102668
VRVGLHRRGAF	11	Unmodified	_VRVGLHRRGAF_					0	0	0			REV__ENST00000472403.5_2_17:42766475-42767202:+|nuORF	REV__ENST00000472403.5_2_17:42766475-42767202:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3765869140625	2	634.378355	1266.74216	1.3188	0.00083664	-2.8412	-0.0018024	-1.5224	-0.00096577	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.6921	1	12902	12902		32.812	11.865	1	12917000	+		64334	27259	42755	42773	72977	72977					0.11945520496556128
VRVGSPWI	8	Unmodified	_VRVGSPWI_					0	0	0		nc|ENSG00000283706|Q9UI38|PRSS50	nc|ENSG00000283706|Q9UI38|PRSS50	nc|ENSG00000283706|Q9UI38|PRSS50	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2637634277344	2	457.266345	912.518136	-1.1676	-0.0005339	-3.1744	-0.0014516	-4.342	-0.0019855	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.87064	1	7532	7532		29.15	3.6994	1	1329900			64335	15322	42756	42774	72978	72978					0.05837812342565485
VRVHVTAKHS	10	Unmodified	_VRVHVTAKHS_					0	0	0			REV__ENSG00000139182|ENST00000266546|CLSTN3	REV__ENSG00000139182|ENST00000266546|CLSTN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3302001953125	2	567.330539	1132.64652	1.3743	0.0007797	-2.3558	-0.0013365	-0.98145	-0.0005568	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.86698	1	10848	10848		28.081	2.5074	1	6182600	+		64336	19521	42757	42775	72979	72979					0.0855074758567298
VRVKDGIKIHS	11	Unmodified	_VRVKDGIKIHS_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2;REV__ENST00000529624.5_3_15:28916682-28918849:+|nuORF	REV__ENSG00000128731|ENST00000261609|HERC2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3807373046875	2	626.380229	1250.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.9	1	114.85	114.35	115.35	-0.05722								0	0	0	0.56276	1	12302	12302		21.686	0.73882	1		+		64337	18791;28270	42758	42776	72980	72980					0.13056145479754377
VRVKRNQQAS	10	Unmodified	_VRVKRNQQAS_					0	0	0		ENST00000375563.4_X:52545864-52545915:-|nuORF	ENST00000375563.4_X:52545864-52545915:-|nuORF	ENST00000375563.4_X:52545864-52545915:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	593.3442993164062	2	593.344178	1184.6738	3.3538	0.0019899	-3.1075	-0.0018438	0.2463	0.00014614	593.3422294286001	103.53	2.4934	103.48	103.12	105.61	-0.043755					162	59	4	0	0	0	0.86047	1	11332	11332		23.523	1.5628	1	2080000			64338	10799	42759	42777	72981	72981					0.08885231126032522
VRVKRNQQAS	10	Unmodified	_VRVKRNQQAS_					0	0	0		ENST00000375563.4_X:52545864-52545915:-|nuORF	ENST00000375563.4_X:52545864-52545915:-|nuORF	ENST00000375563.4_X:52545864-52545915:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	593.3440551757812	2	593.344178	1184.6738	0.89398	0.00053044	-0.36141	-0.00021444	0.53257	0.000316	593.3438403936742	103.36	2.3929	103.49	103.05	105.45	0.12621					170	59	5	0	0	0	0.86047	1	10969	10969		23.523	1.8369	1	4092800			64339	10799	42759	42777	72982	72982					0.08885231126032522
VRVKRNQQAS	10	Unmodified	_VRVKRNQQAS_					0	0	0		ENST00000375563.4_X:52545864-52545915:-|nuORF	ENST00000375563.4_X:52545864-52545915:-|nuORF	ENST00000375563.4_X:52545864-52545915:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	593.3442993164062	2	593.344178	1184.6738	-1.311	-0.00077786	1.8288	0.0010851	0.51784	0.00030725	593.3451395879114	103.37	2.5463	103.48	103.07	105.61	0.11495					173	63	4	0	0	0	0.86587	1	10838	10838		29.17	4.9382	1	3957400			64340	10799	42759	42777	72983	72983					0.08885231126032522
VRVKSPGINL	10	Unmodified	_VRVKSPGINL_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.8375244140625	2	541.837665	1081.66078	0.022744	1.2324E-05	0.836	0.00045297	0.85874	0.0004653	541.8375708786058	35.971	1.1022	36.222	35.634	36.736	0.25101					76	27	4	0	0	0	0.30722	1	2787	2787		71.877	0	1	2361700	+		64341	20903	42760	42778	72984	72984					0.12321400013956918
VRVKSPGINL	10	Unmodified	_VRVKSPGINL_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.8375244140625	2	541.837665	1081.66078	1.1193	0.00060646	-0.035632	-1.9307E-05	1.0836	0.00058715	541.8370205306147	35.873	1.1831	36.314	35.769	36.952	0.44043					76	29	4	0	0	0	0.14384	1	2813	2813		95.815	13.51	1	2738500	+		64342	20903	42760	42778	72985	72985					0.12321400013956918
VRVLDANDN	9	Unmodified	_VRVLDANDN_					0	0	0		nc|ENSG00000138650|Q9P2E7-2|PCDH10;ENSG00000138650|ENST00000264360|PCDH10	nc|ENSG00000138650|Q9P2E7-2|PCDH10	nc|ENSG00000138650|Q9P2E7-2|PCDH10	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.27996826171875	2	508.261988	1014.50942	-1.5868	-0.00080651	-0.91447	-0.00046479	-2.5013	-0.0012713	508.2622406491336	87.889	0.62737	88.059	87.867	88.495	0.16922					16	14	2	0	0	0	0.20789	1	8638	8638		60.118	14.146	1	29682			64343	4312	42761	42779	72986	72986					0.0027479391542328813
VRVLDANDN	9	Unmodified	_VRVLDANDN_					0	0	0		nc|ENSG00000138650|Q9P2E7-2|PCDH10;ENSG00000138650|ENST00000264360|PCDH10	nc|ENSG00000138650|Q9P2E7-2|PCDH10	nc|ENSG00000138650|Q9P2E7-2|PCDH10	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	508.261988	1014.50942	-0.055774	-2.8348E-05	-6.7337	-0.0034225	-6.7895	-0.0034508	508.25965866939526	87.679	0.21535	87.746	87.573	87.788	0.067711	-0.15611	-0.0033103	NaN	60.118	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18999			64344	4312	42761	42779							0.0027479391542328813
VRVLQQYI	8	Unmodified	_VRVLQQYI_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	509.80364990234375	2	509.805834	1017.59712	0.31699	0.0001616	-4.4775	-0.0022826	-4.1605	-0.002121	509.803469034095	86.243	3.7319	86.686	85.584	89.316	0.44331					278	90	4	0	0	0	0.86288	1	10071	10071		26.796	1.222	1	2635100	+		64345	23243	42762	42780	72987	72987					0.08902039576844345
VRVLRLLRA	9	Unmodified	_VRVLRLLRA_					0	0	0			REV__nc|ENSG00000055118|Q12809-2|KCNH2;REV__nc|ENSG00000173826|Q9H252-3|KCNH6;REV__nc|ENSG00000184611|Q9NS40-2|KCNH7	REV__nc|ENSG00000055118|Q12809-2|KCNH2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.3739624023438	2	548.377292	1094.74003	-0.93575	-0.00051314	-4.429	-0.0024288	-5.3648	-0.0029419	548.3746750367458	37.286	2.5459	37.297	36.347	38.893	0.011173					152	57	4	0	0	0	0.7932	1	2468	2468		18.324	3.6603	1	651720	+		64346	16408;21955;22695	42763	42781	72988	72988					0.19645091758752642
VRVLRSSN	8	Unmodified	_VRVLRSSN_					0	0	0			REV__nc|ENSG00000166881|O14524-2|NEMP1	REV__nc|ENSG00000166881|O14524-2|NEMP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.77740478515625	2	465.777608	929.540663	-0.087401	-4.0709E-05	-0.014423	-6.718E-06	-0.10182	-4.7428E-05	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.89043	1	8238	8238		35.618	0	1	1330000	+		64347	15550	42764	42782	72989	72989					0.07307411740180214
VRVLRSSN	8	Unmodified	_VRVLRSSN_					0	0	0			REV__nc|ENSG00000166881|O14524-2|NEMP1	REV__nc|ENSG00000166881|O14524-2|NEMP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7774658203125	2	465.777608	929.540663	-1.0371	-0.00048307	0.85648	0.00039893	-0.18065	-8.4142E-05	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.89962	2	7857	7857;7892		38.806	3.1879	1	1384500	+		64348	15550	42764	42782	72990;72991	72990					0.07307411740180214
VRVLRSSN	8	Unmodified	_VRVLRSSN_					0	0	0			REV__nc|ENSG00000166881|O14524-2|NEMP1	REV__nc|ENSG00000166881|O14524-2|NEMP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7775573730469	2	465.777608	929.540663	0.60386	0.00028126	-0.75167	-0.00035011	-0.14781	-6.8848E-05	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.89962	1	7957	7957		38.806	3.1879	1	1082300	+		64349	15550	42764	42782	72992	72992					0.07307411740180214
VRVMDPLA	8	Unmodified	_VRVMDPLA_					0	0	0			REV__ENST00000536072.6_1_16:67914123-67914333:+|nuORF	REV__ENST00000536072.6_1_16:67914123-67914333:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7546081542969	2	450.752213	899.489873	0.36741	0.00016561	4.3918	0.0019796	4.7592	0.0021452	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.86288	1	8129	8129		26.796	1.3459	1	394230	+		64350	28401	42765	42783	72993	72993					0.0361074637096408
VRVMLLFGL	9	Unmodified	_VRVMLLFGL_					0	0	0			REV__ENST00000260643.6_1_2:27357356-27357503:-|nuORF	REV__ENST00000260643.6_1_2:27357356-27357503:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	524.3214721679688	2	524.322805	1046.63106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.596	1	53.644	53.144	54.144	0.047802								0	0	0	0.31088	1	4385	4385		26.796	4.8362	1		+		64351	24370	42766	42784	72994	72994					0.10960744744261319
VRVNARVRIA	10	Unmodified	_VRVNARVRIA_					0	0	0		ENSG00000147381|ENST00000276344|MAGEA4;chrX:151918356-151923453|23|121.91|0.29|8.73|+|ENST00000360243|MAGEA4,MAGEA4;chrX:151917681-151923453|23|114.61|0.27|8.75|+|ENST00000370335|MAGEA4,MAGEA4;chrX:151917002-151923453|26|252.58|0.36|9.45|+|ENST00000457310|MAGEA4,MAGEA4;chrX:151915637-151923453|23|105.0|0.24|8.75|+|ENST00000370340|MAGEA4,MAGEA4;chrX:151914276-151923453|27|285.22|0.34|9.72|+|ENST00000430273|MAGEA4,MAGEA4	ENSG00000147381|ENST00000276344|MAGEA4	ENSG00000147381|ENST00000276344|MAGEA4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	577.3639526367188	2	577.367456	1152.72036	-0.31737	-0.00018324	-1.1514	-0.0006648	-1.4688	-0.00084803	577.3667048315548	102.49	3.1053	102.49	102.1	105.2	0					198	77	5	0	0	0	0.85934	1	10574	10574		35.618	0.46626	1	6617600			64352	545	42767	42785	72995	72995					0.1501071574798516
VRVNLPRFFTD	11	Unmodified	_VRVNLPRFFTD_					0	0	0			REV__ENSG00000143537|ENST00000356955|ADAM15	REV__ENSG00000143537|ENST00000356955|ADAM15	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.5700378417969	3	455.254216	1362.74082	0.59305	0.00026999	-3.4041	-0.0015497	-2.8111	-0.0012798	455.2527526342903	29.155	0.69985	29.135	28.796	29.496	-0.019407					41	26	2	0	0	0	0.17955	1	1443	1443		17.833	3.1395	1	55658	+		64353	19820	42768	42786	72996	72996					0.0739584161710809
VRVPLGPELKM	11	Unmodified	_VRVPLGPELKM_					0	0	0			REV__ENST00000392219.6_1_19:35660536-35660752:+|nuORF	REV__ENST00000392219.6_1_19:35660536-35660752:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8700561523438	2	619.868108	1237.72166	-0.18236	-0.00011304	2.4987	0.0015488	2.3163	0.0014358	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.72106	1	9749	9749		28.081	3.5623	1	2627900	+		64354	26016	42769	42787	72997	72997					0.11231169001871422
VRVRKRAA	8	Unmodified	_VRVRKRAA_					0	0	0		ENST00000317704.8_1_1:77747869-77779575:+|nuORF	ENST00000317704.8_1_1:77747869-77779575:+|nuORF	ENST00000317704.8_1_1:77747869-77779575:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.8150939941406	2	478.317235	954.619916	-1.818	-0.00086957	-4.1885	-0.0020034	-6.0065	-0.002873	478.31510795693185	35.448	1.0031	35.448	35.005	36.008	0					44	26	2	0	0	0	0.82419	1	1997	1997		13.775	0	1	76605			64355	9997	42770	42788	72998	72998					0.14079103484982625
VRVRRGIT	8	Unmodified	_VRVRRGIT_					0	0	0		ENSG00000162062|ENST00000361837|TEDC2;ENST00000562253.1_1_16:2510284-2511226:+|nuORF	ENSG00000162062|ENST00000361837|TEDC2	ENSG00000162062|ENST00000361837|TEDC2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.80596923828125	2	478.809242	955.603932	-2.669	-0.0012779	-4.0656	-0.0019466	-6.7346	-0.0032246	478.80705318200467	39.283	3.0026	39.295	37.991	40.994	0.011173					154	72	3	0	0	0	0.87922	1	2822	2822		31.955	10.253	1	370420			64356	5665	42771	42789	72999	72999					0.12435397248077606
VRVRRVPPSA	10	Unmodified	_VRVRRVPPSA_					0	0	0			REV__ENSG00000168807|ENST00000336278|SNTB2	REV__ENSG00000168807|ENST00000336278|SNTB2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	568.8543701171875	2	568.854181	1135.69381	1.5207	0.00086506	-3.4304	-0.0019514	-1.9097	-0.0010863	568.8521463691729	102.21	3.6255	102.25	101.63	105.26	0.04319					340	87	6	0	0	0	0.8608	1	11211	11211		34.173	1.3601	1	51352000	+		64357	21521	42772	42790	73000	73000					0.1313902685665198
VRVRRVPPSA	10	Unmodified	_VRVRRVPPSA_					0	0	0			REV__ENSG00000168807|ENST00000336278|SNTB2	REV__ENSG00000168807|ENST00000336278|SNTB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8539428710938	2	568.854181	1135.69381	0.87008	0.00049495	-2.8282	-0.0016088	-1.9581	-0.0011139	568.8524872320593	102.18	3.4192	102.32	101.76	105.18	0.13523					358	84	6	0	0	0	0.8608	1	10840	10840		34.173	1.3601	1	78933000	+		64358	21521	42772	42790	73001	73001					0.1313902685665198
VRVVAPVMLIL	11	Unmodified	_VRVVAPVMLIL_					0	0	0			REV__ENST00000335420.9_1_7:129771218-129771323:+|nuORF	REV__ENST00000335420.9_1_7:129771218-129771323:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	403.92999267578125	3	403.929905	1208.76789	-0.86	-0.00034738	0.20504	8.2823E-05	-0.65496	-0.00026456	403.92988312249787	47.171	4.4037	47.145	45.845	50.249	-0.026737					297	111	4	0	0	0	0.78391	1	3995	3995		14.694	2.487	1	2612300	+		64359	25168	42773	42791	73002	73002					0.1718523390397877
VRVVKFQLQT	10	Unmodified	_VRVVKFQLQT_					0	0	0			REV__ENSG00000150977|ENST00000280571|RILPL2	REV__ENSG00000150977|ENST00000280571|RILPL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2478332519531	3	406.583674	1216.72919	3.1806	0.0012932	-2.547	-0.0010356	0.6336	0.00025761	406.5823777958884	112.82	1.2516	112.85	112.71	113.96	0.028854					79	33	3	0	0	0	0.85259	1	12384	12384		20.03	0	1	2434900	+		64360	20227	42774	42792	73003	73003					0.12949644593800258
VRVWKIPE	8	Unmodified	_VRVWKIPE_					0	0	0		ENSG00000114767|ENST00000232888|RRP9	ENSG00000114767|ENST00000232888|RRP9	ENSG00000114767|ENST00000232888|RRP9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8087158203125	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.84341	1	3864	3864		24.203	0	1	1550000			64361	2790	42775	42793	73004	73004					0.0904234343945518
VRVYHWHQDNL	11	Unmodified	_VRVYHWHQDNL_					0	0	0			REV__ENSG00000108797|ENST00000264638|CNTNAP1	REV__ENSG00000108797|ENST00000264638|CNTNAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	489.5821838378906	3	489.581103	1465.72148	-0.92804	-0.00045435	2.9222	0.0014306	1.9941	0.00097629	489.5824831322865	67.665	0.74184	67.724	67.383	68.125	0.059288					65	27	3	0	0	0	0.74405	1	6046	6046		23.378	3.3474	1	262200	+		64362	17731	42776	42794	73005	73005					0.007248853262353805
VRWEIVGLV	9	Unmodified	_VRWEIVGLV_					0	0	0		ENST00000574285.2_1_16:9197349-9197592:+|nuORF	ENST00000574285.2_1_16:9197349-9197592:+|nuORF	ENST00000574285.2_1_16:9197349-9197592:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	535.8233642578125	2	535.821484	1069.62842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.817	1	54.817	54.317	55.317	0								0	0	0	0.3307	1	4621	4621		19.997	1.7347	1				64363	14033	42777	42795	73006	73006					0.09638612610956443
VRWLFPLV	8	Unmodified	_VRWLFPLV_					0	0	0		ENST00000567034.5_1_16:30198826-30199264:+|nuORF	ENST00000567034.5_1_16:30198826-30199264:+|nuORF	ENST00000567034.5_1_16:30198826-30199264:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3150024414062	2	515.315838	1028.61712	0.48937	0.00025218	0.70409	0.00036283	1.1935	0.00061501	515.3158227096909	21.619	0.7106	21.562	21.21	21.921	-0.057201					34	27	2	0	0	0	0.4196	1	597	597		15.636	0	1	20547			64364	13946	42778	42796	73007	73007					0.10395835307440393
VRYHGRQAAL	10	Unmodified	_VRYHGRQAAL_					0	0	0			REV__ENSG00000183421|ENST00000332512|RIPK4	REV__ENSG00000183421|ENST00000332512|RIPK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	586.3280639648438	2	585.828163	1169.64177	0.69219	0.00040551	2.8324	0.0016593	3.5246	0.0020648	585.8297459988387	57.724	1.3091	57.804	57.326	58.635	0.079643					103	61	2	0	0	0	0.85934	1	4882	4882		35.618	0.46626	1	163030	+		64365	22604	42779	42797	73008	73008					0.06373863442900074
VSAFERRLR	9	Unmodified	_VSAFERRLR_					0	0	0		ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1	ENSG00000009694|ENST00000371130|TENM1	ENSG00000009694|ENST00000371130|TENM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3308715820312	2	567.330539	1132.64652	0.77491	0.00043963	-1.6405	-0.0009307	-0.86557	-0.00049107	567.3295010859051	90.383	2.9034	90.537	88.606	91.509	0.15388					276	69	6	0	0	0	0.7932	1	9201	9201		17.365	1.7232	1	6344600			64366	755	42780	42798	73009	73009					0.08550747585650242
VSAHGAHVSHL	11	Unmodified	_VSAHGAHVSHL_					0	0	0		ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.1016235351562	2	557.791247	1113.56794	-0.31062	-0.00017326	0.12757	7.1158E-05	-0.18305	-0.0001021	557.7923606050413	69.807	0.14249	70.353	70.241	70.383	0.54694					5	3	2	0	0	0	0.18136	1	7732	7732		14.137	1.9303	1	161170			64367	4244	42781	42799	73010	73010					0.015698952805678346
VSAIVHRN	8	Unmodified	_VSAIVHRN_					0	0	0			REV__ENST00000307851.8_1_5:156513872-156514058:-|nuORF	REV__ENST00000307851.8_1_5:156513872-156514058:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	448.2588195800781	2	448.259051	894.503549	-1.2915	-0.00057894	1.2791	0.00057339	-0.012395	-5.5564E-06	448.25951221432746	89.806	3.6834	90.019	87.898	91.582	0.21272					200	88	5	0	0	0	0.87479	1	8975	8975		30.504	1.3541	1	3037400	+		64368	24855	42782	42800	73011	73011					0.05207740194418875
VSANLILLRNR	11	Unmodified	_VSANLILLRNR_					0	0	0		ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3	ENSG00000163625|ENST00000295888|WDFY3	ENSG00000163625|ENST00000295888|WDFY3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.8932495117188	2	634.893503	1267.77245	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.35	1	107.38	106.88	107.88	0.036125								0	0	0	0.56276	1	11454	11454		29.17	1.0886	1				64369	5839	42783	42801	73012	73012					0.1492783437106482
VSARRTLLARV	11	Unmodified	_VSARRTLLARV_					0	0	0			REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	621.3932495117188	2	621.39367	1240.77279	-0.078752	-4.8936E-05	-1.4235	-0.00088457	-1.5023	-0.0009335	621.3926872844422	104.89	3.0871	104.89	104.31	107.4	0					267	72	6	0	0	0	0.68532	1	10907	10907		33.922	1.1711	1	10411000	+		64370	18732	42784	42802	73013	73013					0.1620325409094221
VSARRTLLARV	11	Unmodified	_VSARRTLLARV_					0	0	0			REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3923950195312	2	621.39367	1240.77279	0.9213	0.00057249	-2.6214	-0.0016289	-1.7001	-0.0010564	621.3919111288326	104.42	2.183	104.54	103.98	106.17	0.11684					238	54	5	0	0	0	0.69995	1	11081	11081		31.53	0	1	22352000	+		64371	18732	42784	42802	73014	73014					0.1620325409094221
VSARRTLLARV	11	Unmodified	_VSARRTLLARV_					0	0	0			REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	621.3932495117188	2	621.39367	1240.77279	0.92124	0.00057246	-1.5281	-0.00094954	-0.60683	-0.00037708	621.3925512557826	106.19	2.0795	106.29	105.91	107.99	0.099007					149	50	5	0	0	0	0.638	1	11436	11436		40.058	4.9061	1	2148500	+		64372	18732	42784	42802	73015	73015					0.1620325409094221
VSARRTLLARV	11	Unmodified	_VSARRTLLARV_					0	0	0			REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3925170898438	2	621.39367	1240.77279	-1.2196	-0.00075786	-0.45293	-0.00028145	-1.6726	-0.0010393	621.3932679603124	104.48	2.1193	104.57	104.06	106.18	0.093857					224	52	5	0	0	0	0.64498	1	11054	11054		39.253	6.4404	1	23459000	+		64373	18732	42784	42802	73016	73016					0.1620325409094221
VSARRTLLARV	11	Unmodified	_VSARRTLLARV_					0	0	0			REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	REV__nc|ENSG00000127412|Q9NQA5-2|TRPV5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	621.3939208984375	2	621.39367	1240.77279	-1.2196	-0.00075784	0.59815	0.00037168	-0.62144	-0.00038616	621.3938902114081	107.49	0.83601	107.53	107.1	107.93	0.036118					63	20	4	0	0	0	0.7434	1	11496	11496		23.523	0.48021	1	905080	+		64374	18732	42784	42802	73017	73017					0.1620325409094221
VSASKPVRGG	10	Unmodified	_VSASKPVRGG_					0	0	0			REV__nc|ENSG00000099308|O60307|MAST3	REV__nc|ENSG00000099308|O60307|MAST3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2774658203125	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.8608	1	10255	10255		34.173	1.3601	1	6350300	+		64375	17089	42785	42803	73018	73018					0.06031992020336929
VSAVTAGPPTA	11	Unmodified	_VSAVTAGPPTA_					0	0	0			REV__nc|ENSG00000164078|Q04912-2|MST1R	REV__nc|ENSG00000164078|Q04912-2|MST1R	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.7641296386719	2	485.763832	969.513111	-0.97918	-0.00047565	1.1247	0.00054634	0.14552	7.0691E-05	485.7642084781629	30.192	0.70718	30.22	29.92	30.627	0.028618					28	15	2	0	0	0	0.33509	1	1961	1961		65.465	12.529	1	306330	+		64376	21026	42786	42804	73019	73019					0.02713463689292439
VSAVTAGPPTA	11	Unmodified	_VSAVTAGPPTA_					0	0	0			REV__nc|ENSG00000164078|Q04912-2|MST1R	REV__nc|ENSG00000164078|Q04912-2|MST1R	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	485.763832	969.513111	-0.026672	-1.2956E-05	-0.14351	-6.9711E-05	-0.17018	-8.2667E-05	485.76368952361906	30.367	0.78591	30.346	30.029	30.815	-0.020945	0.062701	-0.00048485	NaN	65.465	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	368450	+		64377	21026	42786	42804							0.02713463689292439
VSCLNCID	8	Unmodified	_VSCLNCID_					0	0	0			REV__ENST00000303329.8_1_15:80886456-80886687:+|nuORF	REV__ENST00000303329.8_1_15:80886456-80886687:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.25579833984375	2	433.690964	865.367374	1.8311	0.00079415	-3.7012	-0.0016052	-1.8701	-0.00081104	433.69083599398914	107.16	0.5042	107.27	106.96	107.47	0.10396					18	14	2	0	0	0	0.4196	1	13045	13045		25.45	0	1	305030	+		64378	24799	42787	42805	73020	73020					-0.07069458422768093
VSCWSAAGG	9	Unmodified	_VSCWSAAGG_					0	0	0			REV__ENST00000222990.7_1_7:2294003-2294420:-|nuORF	REV__ENST00000222990.7_1_7:2294003-2294420:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1839599609375	2	419.18162	836.348688	1.7002	0.00071268	2.3356	0.00097904	4.0358	0.0016917	419.18283597364456	92.161	2.0295	92.608	91.837	93.866	0.44661					131	47	5	0	0	0	0.78058	1	10985	10985		30.504	2.6214	1	2677100	+		64379	24168	42788	42806	73021	73021					-0.07603252002309091
VSDEYFLI	8	Unmodified	_VSDEYFLI_					0	0	0			REV__ENSG00000077044|ENST00000264057|DGKD	REV__ENSG00000077044|ENST00000264057|DGKD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	493.2471923828125	2	493.247483	984.480414	-1.1617	-0.000573	-1.7735	-0.00087477	-2.9352	-0.0014478	493.24654239461523	27.911	1.9472	27.888	27.422	29.369	-0.023556					123	54	4	0	0	0	0.87276	1	1397	1397		29.842	0	1	1012800	+		64380	16733	42789	42807	73022	73022					-0.012447434335740581
VSDKVCSK	8	Unmodified	_VSDKVCSK_					0	0	0		ENST00000337198.9_1_8:103851022-103851082:-|nuORF	ENST00000337198.9_1_8:103851022-103851082:-|nuORF	ENST00000337198.9_1_8:103851022-103851082:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	433.255615234375	2	433.226028	864.437503	0.73494	0.00031839	3.5614	0.0015429	4.2963	0.0018613	433.22882138400945	107.31	0.28438	107.4	107.26	107.55	0.091255					10	6	2	0	0	0	0.4196	1	11500	11500		21.96	16.402	1	82334			64381	10186	42790	42808	73023	73023					-0.0001383676263913003
VSDLIVGNEY	10	Unmodified	_VSDLIVGNEY_					0	0	0		ENSG00000086967|ENST00000357701|MYBPC2	ENSG00000086967|ENST00000357701|MYBPC2	ENSG00000086967|ENST00000357701|MYBPC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	554.776611328125	2	554.779679	1107.5448	-0.35089	-0.00019467	2.1905	0.0012153	1.8397	0.0010206	554.7806948562009	49.372	0.49304	49.832	49.499	49.992	0.45983					21	11	3	0	0	0	0.70553	1	4809	4809		44.377	3.599	1	368970			64382	1563	42791	42809	73024	73024					-0.00466588347421748
VSDLIVGNEY	10	Unmodified	_VSDLIVGNEY_					0	0	0		ENSG00000086967|ENST00000357701|MYBPC2	ENSG00000086967|ENST00000357701|MYBPC2	ENSG00000086967|ENST00000357701|MYBPC2	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	554.779679	1107.5448	0.38375	0.0002129	1.5898	0.00088197	1.9735	0.0010949	554.7802025204654	49.155	0.4868	50.059	49.805	50.292	0.90424	0.11365	-0.00046665	NaN	44.377	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	419040			64383	1563	42791	42809							-0.00466588347421748
VSDLLVAVL	9	Unmodified	_VSDLLVAVL_					0	0	0		ENSG00000184845|ENST00000393752|DRD1	ENSG00000184845|ENST00000393752|DRD1	ENSG00000184845|ENST00000393752|DRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.79150390625	2	464.789318	927.564084	0.19154	8.9025E-05	2.6971	0.0012536	2.8886	0.0013426	464.7904622046614	36.811	0.86831	36.91	36.514	37.382	0.099277					56	23	3	0	0	0	0.77546	1	2041	2041		31.955	0	1	232950			64384	7644	42792	42810	73025	73025					0.09740412734140591
VSDRGKAPLID	11	Unmodified	_VSDRGKAPLID_					0	0	0			REV__nc|ENSG00000114904|P51957-3|NEK4	REV__nc|ENSG00000114904|P51957-3|NEK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	585.8300170898438	2	585.827495	1169.64044	0.36546	0.0002141	4.4503	0.0026071	4.8158	0.0028212	585.8299498087534	57.741	1.3417	57.711	57.197	58.539	-0.029865					92	38	3	0	0	0	0.638	1	5348	5348		40.058	5.8856	1	120850	+		64385	18073	42793	42811	73026	73026					0.062401845634894926
VSDWALLFP	9	Unmodified	_VSDWALLFP_					0	0	0			REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	524.7437744140625	2	524.279118	1046.54368	0.6858	0.00035955	-4.3527	-0.002282	-3.6669	-0.0019225	524.2763326569608	24.938	0.39731	24.988	24.664	25.061	0.050453					15	10	2	0	0	0	0.20789	1	943	943		40.573	4.1259	1	29684	+		64386	22893	42794	42812	73027	73027					0.02227242074309288
VSEDHTFEV	9	Unmodified	_VSEDHTFEV_					0	0	0			REV__ENST00000471501.1_1_1:11709834-11710766:-|nuORF	REV__ENST00000471501.1_1_1:11709834-11710766:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.7423095703125	2	531.740554	1061.46655	0.37984	0.00020198	3.1304	0.0016646	3.5103	0.0018665	531.7420122242892	41.862	0.6606	41.831	41.583	42.244	-0.030991					32	15	3	0	0	0	0.76255	1	3081	3081		35.618	0.46626	1	422650	+		64387	18207	42795	42813	73028	73028					-0.0617202093267224
VSEGATLLVA	10	Unmodified	_VSEGATLLVA_					0	0	0		ENST00000509683.5_1_4:42065060-42077708:+|nuORF;ENSG00000014824|ENST00000264451|SLC30A9	ENST00000509683.5_1_4:42065060-42077708:+|nuORF	ENST00000509683.5_1_4:42065060-42077708:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.27386474609375	2	480.274032	958.533512	-0.14768	-7.0928E-05	0.4279	0.00020551	0.28022	0.00013458	480.27414686344235	56.98	0.78465	57.536	57.181	57.965	0.55512					49	18	3	0	0	0	0.43769	1	5949	5949		60.972	0	1	1958100			64388	818	42796	42814	73029	73029					0.052586343491157095
VSEIRHTAD	9	Unmodified	_VSEIRHTAD_					0	0	0		ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	514.2642211914062	2	514.261988	1026.50942	1.0382	0.0005339	3.0011	0.0015434	4.0393	0.0020773	514.2632555744982	50.06	0.90005	50.905	50.395	51.295	0.84501					54	21	4	0	0	0	0.35373	1	4935	4935		60.972	3.1607	1	2140300			64389	2284	42797	42815	73030	73030					-0.0027720608457002527
VSEKAVQAK	9	Unmodified	_VSEKAVQAK_					0	0	0			REV__ENSG00000126261|ENST00000246548|UBA2	REV__ENSG00000126261|ENST00000246548|UBA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.28045654296875	2	480.279649	958.544745	0.7717	0.00037063	1.7139	0.00082313	2.4856	0.0011938	480.2803620353023	99.435	0.88804	99.592	99.235	100.12	0.15659					37	20	2	0	0	0	0.7932	1	10385	10385		26.693	0	1	335910	+		64390	18699	42798	42816	73031	73031					0.06381456443239131
VSENTTEP	8	Unmodified	_VSENTTEP_					0	0	0			REV__ENSG00000099381|ENST00000262519|SETD1A	REV__ENSG00000099381|ENST00000262519|SETD1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.701904296875	2	438.700897	875.387241	1.6403	0.00071958	0.26702	0.00011714	1.9073	0.00083672	438.7009179608706	26.809	0.51258	26.781	26.508	27.021	-0.027706					18	11	2	0	0	0	0.90465	1	1168	1168		40.573	0	1	57344	+		64391	17094	42799	42817	73032	73032					-0.055436678868090894
VSEQQRHQ	8	Unmodified	_VSEQQRHQ_					0	0	0		ENST00000526844.1_1_11:62365783-62368922:-|nuORF;ENSG00000149480|ENST00000278823|MTA2	ENST00000526844.1_1_11:62365783-62368922:-|nuORF	ENST00000526844.1_1_11:62365783-62368922:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.2530822753906	2	506.251954	1010.48936	-1.6382	-0.00082933	4.1828	0.0021175	2.5446	0.0012882	506.25395587471024	37.705	1.0151	37.705	37.395	38.41	0					69	24	5	0	0	0	0.90983	1	2315	2315		42.396	3.1433	1	1276600			64392	5029	42800	42818	73033	73033					-0.015469570245159048
VSESGTSGGG	10	Unmodified	_VSESGTSGGG_					0	0	0		ENST00000565149.5_1_16:88722845-88722914:-|nuORF	ENST00000565149.5_1_16:88722845-88722914:-|nuORF	ENST00000565149.5_1_16:88722845-88722914:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.1839904785156	2	419.182872	836.35119	1.7002	0.00071268	-0.64929	-0.00027217	1.0509	0.00044051	419.18283597364456	92.161	2.0295	92.608	91.837	93.866	0.44661					131	47	5	0	0	0	0.86218	1	10913	10913		32.812	2.3088	1	2677100			64393	13906	42801	42819	73034	73034					-0.07353125063639254
VSFALPTSAS	10	Unmodified	_VSFALPTSAS_					0	0	0			REV__ENST00000557439.5_1_14:104172000-104172285:-|nuORF	REV__ENST00000557439.5_1_14:104172000-104172285:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	490.2579345703125	2	490.258382	978.502212	1.5736	0.00077149	-2.2967	-0.001126	-0.72311	-0.00035451	490.25714425919216	107.1	2.1346	107.2	105.77	107.9	0.10396					168	84	3	0	0	0	0.77314	1	13041	13041		40.778	3.6191	1	1431500	+		64394	28717	42802	42820	73035	73035					0.012100613149982564
VSFNKMKKLTT	11	Unmodified	_VSFNKMKKLTT_					0	0	0		ENSG00000174720|ENST00000344442|LARP7;nc|ENSG00000174720|Q4G0J3-3|LARP7	ENSG00000174720|ENST00000344442|LARP7	ENSG00000174720|ENST00000344442|LARP7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	648.8726196289062	2	648.870848	1295.72714	0.93377	0.00060589	0.13216	8.5753E-05	1.0659	0.00069165	648.8712589757642	99.284	2.1869	99.441	98.679	100.87	0.15659					107	50	3	0	0	0	0.638	1	10408	10408		40.058	3.6114	1	221690			64395	6957	42803	42821	73036	73036					0.0911084779365865
VSFVLIFAHG	10	Unmodified	_VSFVLIFAHG_					0	0	0			REV__ENSG00000176490|ENST00000323469|DIRAS1	REV__ENSG00000176490|ENST00000323469|DIRAS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3091430664062	2	545.30821	1088.60187	0.13985	7.626E-05	2.5578	0.0013948	2.6976	0.001471	545.309312821063	16.161	0.22557	15.562	15.422	15.648	-0.59873					10	4	3	0	0	0	0.86305	1	96	96		31.955	5.2619	1	108300	+		64396	22130	42804	42822	73037	73037					0.061109237195978494
VSFVRVGNG	9	Unmodified	_VSFVRVGNG_					0	0	0		nc|ENSG00000254838|Q7Z2Y8|GVINP1;ENST00000526769.3_1_11:6735844-6741409:-|nuORF	nc|ENSG00000254838|Q7Z2Y8|GVINP1	nc|ENSG00000254838|Q7Z2Y8|GVINP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.2410583496094	2	467.758884	933.503215	-1.272	-0.00059497	0.34572	0.00016171	-0.92624	-0.00043325	467.7588174755281	38.684	0.41724	39.206	39.079	39.496	0.52235					10	9	2	0	0	0	0.20789	1	3196	3196		32.812	2.4947	1	47371			64397	15293	42805	42823	73038	73038					0.03380320474570908
VSGAAMLRR	9	Unmodified	_VSGAAMLRR_					0	0	0		chr2:112275637-112299849|48|22.31|0.45|5.64|+|0|None,ZC3H6|1	chr2:112275637-112299849|48|22.31|0.45|5.64|+|0|None,ZC3H6|1	chr2:112275637-112299849|48|22.31|0.45|5.64|+|0|None,ZC3H6|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.7692565917969	2	480.774011	959.533469	-2.5003	-0.0012021	-2.9045	-0.0013964	-5.4048	-0.0025985	480.7724817241375	41.101	0.70321	41.107	40.803	41.506	0.0065727					33	18	2	0	0	0	0.47272	1	2988	2988		53.351	5.3919	1	446290			64398	305	42806	42824	73039	73039					0.052083558681147224
VSGAIIKHF	9	Unmodified	_VSGAIIKHF_					0	0	0			REV__nc|ENSG00000198739|Q86VH5-2|LRRTM3	REV__nc|ENSG00000198739|Q86VH5-2|LRRTM3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.78594970703125	2	486.287277	970.560001	0.15015	7.3014E-05	1.6912	0.0008224	1.8413	0.00089541	486.2882066362446	31.236	0.52028	31.24	30.796	31.317	0.0037212					21	11	3	0	0	0	0.20789	1	2105	2105		32.812	0	1	238020	+		64399	23370	42807	42825	73040	73040					0.07354368031087688
VSGDEVYS	8	Unmodified	_VSGDEVYS_					0	0	0		ENST00000489998.5_1_1:157765891-157772050:-|nuORF;nc|ENSG00000163534|Q96LA6-2|FCRL1;ENSG00000163534|ENST00000368176|FCRL1	ENST00000489998.5_1_1:157765891-157772050:-|nuORF	ENST00000489998.5_1_1:157765891-157772050:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.1884765625	2	428.190165	854.365778	0.56239	0.00024081	-3.9446	-0.001689	-3.3822	-0.0014482	428.188480846816	95.18	2.0833	95.6	94.977	97.06	0.41964					117	50	4	0	0	0	0.92457	1	11433	11433		47.916	3.3845	1	1648300			64400	5818	42808	42826	73041	73041					-0.06723052915504013
VSGEIWRHA	9	Unmodified	_VSGEIWRHA_					0	0	0		chr2:223060703-223076487|33|15.18|0.41|5.22|+|2|TE_info:MLT1B,MLT1B_dup2625,ERVL-MaLR,LTR,acceptor,+,223076487,223076696|KCNE4,None|2	chr2:223060703-223076487|33|15.18|0.41|5.22|+|2|TE_info:MLT1B,MLT1B_dup2625,ERVL-MaLR,LTR,acceptor,+,223076487,223076696|KCNE4,None|2	chr2:223060703-223076487|33|15.18|0.41|5.22|+|2|TE_info:MLT1B,MLT1B_dup2625,ERVL-MaLR,LTR,acceptor,+,223076487,223076696|KCNE4,None|2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.3031005859375	2	527.775065	1053.53558	-0.47554	-0.00025098	-2.6151	-0.0013802	-3.0906	-0.0016312	527.7738323583324	58.263	0.5843	58.655	58.315	58.899	0.39209					24	13	2	0	0	0	0.20789	1	6075	6075		16.473	0	1	262770			64401	327	42809	42827	73042	73042					0.010951078775633505
VSGGGPLHHL	10	Unmodified	_VSGGGPLHHL_					0	0	0			REV__ENST00000360370.8_1_3:125726003-125734341:-|nuORF	REV__ENST00000360370.8_1_3:125726003-125734341:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	487.7109375	2	487.264333	972.514114	-0.62248	-0.00030331	-2.4105	-0.0011746	-3.033	-0.0014779	487.26390946231555	27.577	0.79139	27.48	27.004	27.796	-0.096945					32	17	3	0	0	0	0.37624	1	1591	1591		23.042	3.939	1	94517	+		64402	25477	42810	42828	73043	73043					0.026757228488463625
VSGGVCDGCQ	10	Unmodified	_VSGGVCDGCQ_					0	0	0		ENSG00000172037|ENST00000305544|LAMB2	ENSG00000172037|ENST00000305544|LAMB2	ENSG00000172037|ENST00000305544|LAMB2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	462.67950439453125	2	462.681127	923.347702	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.503	1	17.549	17.049	18.049	0.0457								0	0	0	0.45132	1	255	255		29.17	1.2878	1				64403	6737	42811	42829	73044	73044					-0.11703834433524207
VSGIGVVVLL	10	Unmodified	_VSGIGVVVLL_					0	0	0			REV__nc|ENSG00000177076|Q5QJU3-3|ACER2	REV__nc|ENSG00000177076|Q5QJU3-3|ACER2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.3147888183594	2	478.312961	954.611368	0.0045756	2.1886E-06	2.6324	0.0012591	2.637	0.0012613	478.31396416822815	36.772	0.80082	36.754	36.464	37.265	-0.018673					27	17	2	0	0	0	0.85939	1	2377	2377		23.042	6.5693	1	70580	+		64404	22177	42812	42830	73045	73045					0.13224692005132965
VSGKKGKKKR	10	Unmodified	_VSGKKGKKKR_					0	0	0			REV__ENST00000246139.9_1_X:71526667-71526790:-|nuORF	REV__ENST00000246139.9_1_X:71526667-71526790:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.3743286132812	2	558.372207	1114.72986	0.82876	0.00046276	1.0416	0.00058161	1.8704	0.0010444	558.3717840301557	15.728	0.36897	15.239	15.16	15.529	-0.48917					14	9	3	0	0	0	0.85958	1	39	39		15.642	1.5047	1	61446	+		64405	24256	42813	42831	73046	73046					0.17708484033505556
VSGKPPPWSD	10	Unmodified	_VSGKPPPWSD_					0	0	0			REV__ENST00000257013.8_1_X:134167023-134167440:+|nuORF	REV__ENST00000257013.8_1_X:134167023-134167440:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2666625976562	2	535.269281	1068.52401	0.30503	0.00016327	-2.4959	-0.001336	-2.1909	-0.0011727	535.2678902855296	25.638	0.63939	25.381	25.043	25.682	-0.2572					35	14	3	0	0	0	0.85981	1	1364	1364		35.152	2.3396	1	367200	+		64406	24336	42814	42832	73047	73047					-0.007511339364327796
VSGLCHLH	8	Unmodified	_VSGLCHLH_					0	0	0		ENSG00000138696|ENST00000515059|BMPR1B;nc|ENSG00000138696|O00238-2|BMPR1B	ENSG00000138696|ENST00000515059|BMPR1B	ENSG00000138696|ENST00000515059|BMPR1B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.2554626464844	2	433.22108	864.427607	-1.5597	-0.00067569	-2.2313	-0.00096665	-3.791	-0.0016423	433.22101116739833	107.01	0.50066	107.14	106.81	107.32	0.13866					21	12	3	0	0	0	0.4196	1	11502	11502		20.482	0	1	509670			64407	4319	42815	42833	73048	73048					-0.010029799773747072
VSGLKWLP	8	Unmodified	_VSGLKWLP_					0	0	0			REV__ENST00000391973.6_1_2:242292298-242292463:+|nuORF	REV__ENST00000391973.6_1_2:242292298-242292463:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.78778076171875	2	450.271096	898.527639	-0.1405	-6.3262E-05	-3.456	-0.0015561	-3.5965	-0.0016194	450.2704784261458	109.72	0.50404	109.67	109.56	110.06	-0.052795					48	25	3	0	0	0	0.4196	1	11964	11964		19.36	0	1	662290	+		64408	26008	42816	42834	73049	73049					0.07431580628076517
VSGLLLVDL	9	Unmodified	_VSGLLLVDL_					0	0	0			REV__ENSG00000167646|ENST00000524407|DNAAF3	REV__ENSG00000167646|ENST00000524407|DNAAF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.79107666015625	2	464.789318	927.564084	-0.072724	-3.3801E-05	3.0915	0.0014369	3.0188	0.0014031	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.78536	1	2126	2126		29.15	1.2673	1	297050	+		64409	21410	42817	42835	73050	73050					0.09740412734140591
VSGLPHLI	8	Unmodified	_VSGLPHLI_					0	0	0			REV__ENST00000425350.1_1_13:49151796-49152201:-|nuORF	REV__ENST00000425350.1_1_13:49151796-49152201:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.25860595703125	2	418.255446	834.496338	0.32045	0.00013403	0.67789	0.00028353	0.99835	0.00041756	418.2551231616161	22.481	0.28642	21.87	21.745	22.031	-0.6107					9	6	2	0	0	0	0.4196	1	911	911		18.324	0	1	73685	+		64410	26532	42818	42836	73051	73051					0.07247007594003207
VSGLRLPFV	9	Unmodified	_VSGLRLPFV_					0	0	0		ENST00000299320.9_1_16:4786559-4787880:+|nuORF	ENST00000299320.9_1_16:4786559-4787880:+|nuORF	ENST00000299320.9_1_16:4786559-4787880:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.29852294921875	2	494.302927	986.591301	-0.74755	-0.00036952	-2.778	-0.0013732	-3.5256	-0.0017427	494.3017050171765	103.79	1.0992	103.79	103.29	104.39	0					58	26	3	0	0	0	0.78058	1	10633	10633		30.504	9.5567	1	244980			64411	9780	42819	42837	73052	73052					0.09746941065179726
VSGNELLNRF	10	Unmodified	_VSGNELLNRF_					0	0	0			REV__ENST00000525353.5_1_11:85361339-85366664:+|nuORF	REV__ENST00000525353.5_1_11:85361339-85366664:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	574.80615234375	2	574.806562	1147.59857	-0.31971	-0.00018377	0.46719	0.00026855	0.14748	8.4775E-05	574.8065752551452	33.893	0.70363	33.895	33.586	34.289	0.0026054					36	15	3	0	0	0	0.8545	1	2051	2051		36.447	3.6343	1	176100	+		64412	28181	42820	42838	73053	73053					0.030676288749418745
VSGPAWHL	8	Unmodified	_VSGPAWHL_					0	0	0			REV__ENST00000462251.1_1_19:11877828-11888701:+|nuORF	REV__ENST00000462251.1_1_19:11877828-11888701:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	433.2557373046875	2	433.729595	865.444637	-1.8284	-0.00079303	2.5525	0.0011071	0.72412	0.00031407	433.73164630634017	107.27	0.51551	107.31	106.94	107.45	0.036125					17	12	2	0	0	0	0.4196	1	11426	11426		50.025	29.543	1	161200	+		64413	27048	42821	42839	73054	73054					0.006532639000965901
VSGPLRLLEP	10	Unmodified	_VSGPLRLLEP_					0	0	0		ENST00000508662.5_1_5:149618053-149669203:-|nuORF	ENST00000508662.5_1_5:149618053-149669203:-|nuORF	ENST00000508662.5_1_5:149618053-149669203:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	540.8250122070312	2	540.824224	1079.63389	-1.2662	-0.0006848	1.3835	0.00074824	0.11731	6.3442E-05	540.8247382422055	30.943	2.0454	31.023	30.325	32.37	0.079834					106	46	3	0	0	0	0.33399	2	2027	2027;2044		69.628	5.3959	1	213150			64414	12977	42822	42840	73055;73056	73055					0.09726291402739662
VSGPPLVM	8	Unmodified	_VSGPPLVM_					0	0	0		ENST00000463414.5_2_7:150758587-150759062:+|nuORF	ENST00000463414.5_2_7:150758587-150759062:+|nuORF	ENST00000463414.5_2_7:150758587-150759062:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5487060546875	2	400.222757	798.430961	1.2236	0.0004897	-1.2355	-0.00049448	-0.011955	-4.7847E-06	400.2226360430293	49.581	0.40679	50.041	49.748	50.155	0.45983					13	9	2	0	0	0	0.4196	1	4795	4795		8.2313	0	1	373520			64415	12061	42823	42841	73057	73057					0.0236827007664715
VSGRHKAF	8	Unmodified	_VSGRHKAF_					0	0	0		ENSG00000186113|ENST00000335605|OR5D14	ENSG00000186113|ENST00000335605|OR5D14	ENSG00000186113|ENST00000335605|OR5D14	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2637023925781	2	451.253769	900.492984	-1.6839	-0.00075987	0.61352	0.00027685	-1.0704	-0.00048302	451.2555281352922	29.617	0.34752	29.587	29.3	29.647	-0.029207					10	7	2	0	0	0	0.4196	1	1882	1882		7.6903	0	1	24607			64416	7775	42824	42842	73058	73058					0.03875757539992719
VSGRIPPN	8	Unmodified	_VSGRIPPN_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	420.2274475097656	2	420.240327	838.466101	2.5211	0.0010595	2.2609	0.0009501	4.7819	0.0020096	420.2411665624296	79.602	0.15967	79.656	79.505	79.664	0.053841					6	4	2	0	0	0	0.4196	1	7867	7867		35.618	3.6634	1	14281			64417	9032	42825	42843	73059	73059					0.04040648928787505
VSGRNAAR	8	Unmodified	_VSGRNAAR_					0	0	0		ENST00000529024.1_1_11:74700112-74729768:+|nuORF;nc|ENSG00000162139|Q9UQ49|NEU3;ENSG00000162139|ENST00000294064|NEU3	ENST00000529024.1_1_11:74700112-74729768:+|nuORF	ENST00000529024.1_1_11:74700112-74729768:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.5892333984375	2	415.7332	829.451848	1.059	0.00044027	2.6288	0.0010929	3.6878	0.0015332	415.73418543569403	33.525	0.54313	33.785	33.488	34.031	0.25977					18	12	2	0	0	0	0.4196	1	2439	2439		23.042	0	1	125640			64418	5671	42826	42844	73060	73060					0.030299965005042395
VSGTSVRIRG	10	Unmodified	_VSGTSVRIRG_					0	0	0			REV__ENSG00000178502|ENST00000319121|KLHL11	REV__ENSG00000178502|ENST00000319121|KLHL11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3003540039062	2	516.301447	1030.58834	-0.029363	-1.516E-05	-1.5847	-0.0008182	-1.6141	-0.00083336	516.3013663532613	57.234	1.5278	57.221	56.762	58.289	-0.012203					115	51	4	0	0	0	0.86802	1	5132	5132		27.047	0.3544	1	678400	+		64419	22283	42827	42845	73061	73061					0.07427065940373723
VSGWAMIEYH	10	Unmodified	_VSGWAMIEYH_					0	0	0			REV__ENST00000600380.1_1_13:99101286-99101697:+|nuORF	REV__ENST00000600380.1_1_13:99101286-99101697:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.7764892578125	2	596.776416	1191.53828	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.6	1	119.6	119.1	120.1	0								0	0	0	0.45132	1	12126	12126		21.96	0	1		+		64420	29311	42828	42846	73062	73062					-0.04982804779797334
VSGYSTCH	8	Unmodified	_VSGYSTCH_					0	0	0		nc|ENSG00000162636|Q5T8I3-2|EEIG2;ENSG00000162636|ENST00000370035|EEIG2	nc|ENSG00000162636|Q5T8I3-2|EEIG2	nc|ENSG00000162636|Q5T8I3-2|EEIG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.17999267578125	2	427.179078	852.343602	1.7654	0.00075416	1.7706	0.00075637	3.536	0.0015105	427.1799893138367	98.58	1.3582	98.957	98.616	99.975	0.37679					58	33	3	0	0	0	0.884	2	11920	11920;11944		33.516	0	1	1156800			64421	5711	42829	42847	73063;73064	73063					-0.0884755586492929
VSGYTILL	8	Unmodified	_VSGYTILL_					0	0	0			REV__chr16:635022-635281|24|14.08|0.24|5.85|-|0|None,METTL26|1	REV__chr16:635022-635281|24|14.08|0.24|5.85|-|0|None,METTL26|1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.59771728515625	2	433.255111	864.49567	-0.96205	-0.00041681	0.18396	7.9702E-05	-0.77809	-0.00033711	433.2558834375808	107.3	0.97002	107.3	106.8	107.77	0					98	22	6	0	0	0	0.4196	1	11185	11185		26.796	0	1	53955000	+		64422	15635	42830	42848	73065	73065					0.05800168154291896
VSHFMENER	9	Unmodified	_VSHFMENER_					0	0	0		nc|ENSG00000066248|Q8N5V2-2|NGEF;nc|ENSG00000066248|Q8N5V2-3|NGEF;ENSG00000066248|ENST00000264051|NGEF	nc|ENSG00000066248|Q8N5V2-2|NGEF	nc|ENSG00000066248|Q8N5V2-2|NGEF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.7611694335938	2	574.761297	1147.50804	-1.5692	-0.00090192	1.8346	0.0010545	0.26538	0.00015253	574.7622021064316	57.79	0.83128	58.184	57.78	58.611	0.39407					43	18	3	0	0	0	0.55097	1	6015	6015		49.442	5.0644	1	1326000			64423	1154	42831	42849	73066	73066					-0.05981163444971571
VSHMRGMASA	10	Oxidation (M)	_VSHMRGM(Oxidation (M))ASA_		VSHM(0.002)RGM(0.998)ASA		VSHM(-26)RGM(26)ASA	0	0	1			REV__ENST00000403372.6_2_13:24144913-24190045:+|nuORF	REV__ENST00000403372.6_2_13:24144913-24190045:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.74267578125	2	531.744593	1061.47463	-0.59028	-0.00031388	-3.803	-0.0020222	-4.3933	-0.0023361	531.742394862597	41.771	0.82603	41.774	41.461	42.287	0.0034142					40	19	3	0	0	0	0.49268	1	3111	3111		56.434	6.4093	2	539690	+		64424	26275	42832	42850	73067	73067		405			-0.053644884885216015
VSHRKDWRRTQ	11	Unmodified	_VSHRKDWRRTQ_					0	0	0		ENST00000597173.5_1_2:145780789-145909247:+|nuORF	ENST00000597173.5_1_2:145780789-145909247:+|nuORF	ENST00000597173.5_1_2:145780789-145909247:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	490.26409912109375	3	490.267519	1467.78073	-2.4016	-0.0011774	-3.2749	-0.0016056	-5.6766	-0.002783	490.26590885265085	67.434	0.60155	67.465	67.201	67.803	0.030571					35	22	2	0	0	0	0.76892	1	6397	6397		17.833	1.3033	1	135480			64425	14348	42833	42851	73068	73068					0.06554781340378213
VSHRVLGLAV	10	Unmodified	_VSHRVLGLAV_					0	0	0		ENST00000557626.5_1_14:57046563-57082746:+|nuORF;ENST00000557657.5_1_14:57046563-57079004:+|nuORF;ENST00000556975.5_1_14:57046563-57059833:+|nuORF	ENST00000557626.5_1_14:57046563-57082746:+|nuORF	ENST00000557626.5_1_14:57046563-57082746:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7822265625	2	525.824558	1049.63456	-0.38881	-0.00020445	-2.9355	-0.0015436	-3.3243	-0.001748	525.8227713387977	47.415	0.39649	47.887	47.65	48.047	0.4714					18	9	3	0	0	0	0.37624	1	4487	4487		27.882	3.6795	1	788260			64426	13780	42834	42852	73069	73069					0.11173130842462342
VSHSQATTH	9	Unmodified	_VSHSQATTH_					0	0	0			REV__ENST00000597909.5_2_19:53394558-53400931:-|nuORF	REV__ENST00000597909.5_2_19:53394558-53400931:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	484.2331237792969	2	484.23323	966.451907	0.84969	0.00041145	-0.8013	-0.00038802	0.048386	2.343E-05	484.2327183120764	21.724	1.2506	21.788	21.289	22.539	0.064745					110	44	4	0	0	0	0.25483	1	611	611		68.787	2.9837	1	903290	+		64427	29273	42835	42853	73070	73070					-0.032660482901405885
VSHSQATTH	9	Unmodified	_VSHSQATTH_					0	0	0			REV__ENST00000597909.5_2_19:53394558-53400931:-|nuORF	REV__ENST00000597909.5_2_19:53394558-53400931:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	484.23284912109375	2	484.23323	966.451907	0.53423	0.00025869	-0.66811	-0.00032352	-0.13388	-6.4827E-05	484.2328344963672	23.219	1.5737	22.644	22.068	23.641	-0.57415					75	37	3	0	0	0	0.67345	1	1001	1001		42.396	1.618	1	1837400	+		64428	29273	42835	42853	73071	73071					-0.032660482901405885
VSHVGIKLLR	10	Unmodified	_VSHVGIKLLR_					0	0	0		ENSG00000091536|ENST00000647165|MYO15A;nc|ENSG00000091536|Q9UKN7-2|MYO15A;ENST00000536811.5_1_17:18058633-18060585:+|nuORF	ENSG00000091536|ENST00000647165|MYO15A	ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.3619995117188	2	561.361308	1120.70806	0.36083	0.00020256	3.644	0.0020456	4.0049	0.0022482	561.3631992343464	46.11	1.1029	46.106	45.577	46.68	-0.0041618					45	26	2	0	0	0	0.85466	1	3671	3671		20.947	2.6225	1	163920			64429	1679	42836	42854	73072	73072					0.15253679284933241
VSIAVIKGLTY	11	Unmodified	_VSIAVIKGLTY_					0	0	0		ENST00000425818.2_1_15:66679685-66737158:+|nuORF;ENSG00000169032|ENST00000307102|MAP2K1	ENST00000425818.2_1_15:66679685-66737158:+|nuORF	ENST00000425818.2_1_15:66679685-66737158:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533325195312	2	582.355357	1162.69616	0.15817	9.2113E-05	-3.4182	-0.0019906	-3.26	-0.0018985	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.68532	1	11304	11304		33.922	1.1092	1	78004000			64430	6461	42837	42855	73073	73073					0.12132017751082458
VSIAVIKGLTY	11	Unmodified	_VSIAVIKGLTY_					0	0	0		ENST00000425818.2_1_15:66679685-66737158:+|nuORF;ENSG00000169032|ENST00000307102|MAP2K1	ENST00000425818.2_1_15:66679685-66737158:+|nuORF	ENST00000425818.2_1_15:66679685-66737158:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353271484375	2	582.355357	1162.69616	-1.3468	-0.00078434	-1.6186	-0.00094258	-2.9654	-0.0017269	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.72739	1	12403	12403		27.047	4.0048	1	3937500			64431	6461	42837	42855	73074	73074					0.12132017751082458
VSIEAEKGNP	10	Unmodified	_VSIEAEKGNP_					0	0	0			REV__ENSG00000166963|ENST00000300231|MAP1A	REV__ENSG00000166963|ENST00000300231|MAP1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.2718505859375	2	522.272021	1042.52949	-0.37409	-0.00019538	-1.733	-0.00090511	-2.1071	-0.0011005	522.270722987466	47.085	0.78327	47.556	47.3	48.084	0.47139					26	18	2	0	0	0	0.64457	1	4461	4461		47.657	3.1263	1	1291500	+		64432	21346	42838	42856	73075	73075					0.009925448553985916
VSIHGLRN	8	Unmodified	_VSIHGLRN_					0	0	0			REV__ENSG00000176020|ENST00000320431|AMIGO3	REV__ENSG00000176020|ENST00000320431|AMIGO3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	448.2585144042969	2	448.259051	894.503549	-0.14447	-6.4758E-05	0.22166	9.9363E-05	0.077198	3.4605E-05	448.2590229245312	90.101	3.0472	90.17	88.225	91.272	0.068695					215	72	5	0	0	0	0.87922	1	9289	9289		31.955	1.4512	1	2722700	+		64433	22097	42839	42857	73076	73076					0.05207740194418875
VSIKVNRHLQ	10	Unmodified	_VSIKVNRHLQ_					0	0	0		ENSG00000181072|ENST00000680005|CHRM2	ENSG00000181072|ENST00000680005|CHRM2	ENSG00000181072|ENST00000680005|CHRM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.3587036132812	2	597.359296	1192.70404	0.89294	0.00053341	-2.814	-0.001681	-1.921	-0.0011475	597.3572186988753	100.16	1.989	100.31	99.308	101.3	0.15073					130	46	4	0	0	0	0.8651	1	10437	10437		25.574	1.0549	1	2674200			64434	7371	42840	42858	73077	73077					0.11539589791209437
VSINRAVPQMP	11	Unmodified	_VSINRAVPQMP_					0	0	0		ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	ENSG00000135999|ENST00000258484|EPC2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	606.3328857421875	2	606.33189	1210.64923	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.352	1	65.477	64.977	65.977	0.12545								0	0	0	0.56276	1	5793	5793		32.751	5.7032	1				64435	4077	42841	42859	73078	73078					0.052328349283015996
VSIRPIIGPV	10	Unmodified	_VSIRPIIGPV_					0	0	0			REV__ENST00000433223.2_9:43400186-43400471:+|nuORF	REV__ENST00000433223.2_9:43400186-43400471:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7822265625	2	525.837134	1049.65972	-0.37667	-0.00019807	-3.3244	-0.0017481	-3.701	-0.0019461	525.8356099642716	47.365	0.27996	47.836	47.693	47.973	0.47139					8	6	2	0	0	0	0.37624	1	4487	4487		16.473	0	1	275640	+		64436	26647	42842	42860	73079	73079					0.1368718564503979
VSIRTGHGG	9	Unmodified	_VSIRTGHGG_					0	0	0			REV__CON__Q9D312	REV__CON__Q9D312	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.24078369140625	2	442.240858	882.467164	-1.4215	-0.00062863	1.6038	0.00070926	0.18234	8.0638E-05	442.24147223736173	81.348	6.9304	81.493	77.441	84.371	0.14513					412	196	4	0	0	0	0.76255	1	7922	7922		35.618	0	1	1219900	+	+	64437	16031	42843	42861	73080	73080					0.021228632977113193
VSITEEVVI	9	Unmodified	_VSITEEVVI_					0	0	0			REV__nc|ENSG00000085982|Q9NVE5|USP40	REV__nc|ENSG00000085982|Q9NVE5|USP40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.7806701660156	2	494.78169	987.548827	-0.85772	-0.00042438	-1.7763	-0.00087889	-2.634	-0.0013033	494.78076751353706	86.149	4.0438	86.207	84.717	88.761	0.057899					232	94	3	0	0	0	0.77546	1	8631	8631		31.955	2.8053	1	737700	+		64438	16902	42844	42862	73081	73081					0.0545550114627531
VSIVEGILV	9	Unmodified	_VSIVEGILV_					0	0	0			REV__MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|66|3|anti-sense	REV__MER11C_dup274|chr5:81900523-81901603:+|1.062350918618194|0.0676818777852497|3.97|60.0|66|3|anti-sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7906799316406	2	464.789318	927.564084	-0.5794	-0.0002693	3.5758	0.001662	2.9964	0.0013927	464.7908532898128	34.66	1.9206	34.603	34.004	35.925	-0.056385					115	43	4	0	0	0	0.78536	1	2180	2180		29.15	4.9468	1	409180	+		64439	29648	42845	42863	73082	73082					0.0974041273415196
VSKIAAGFLTV	11	Unmodified	_VSKIAAGFLTV_					0	0	0			REV__ENSG00000101353|ENST00000343811|MROH8	REV__ENSG00000101353|ENST00000343811|MROH8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.328369140625	2	553.334424	1104.6543	-0.75754	-0.00041917	-2.8743	-0.0015905	-3.6319	-0.0020096	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.72106	1	10387	10387		28.081	1.2854	1	4355400	+		64440	17272	42846	42864	73083	73083					0.10615462062560255
VSKKHNTLTVR	11	Unmodified	_VSKKHNTLTVR_					0	0	0			REV__nc|ENSG00000171566|O43660-2|PLRG1	REV__nc|ENSG00000171566|O43660-2|PLRG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	641.8816528320312	2	641.883136	1281.75172	0.89498	0.00057447	-2.058	-0.001321	-1.163	-0.00074653	641.8816647321656	95.707	2.6304	95.87	94.248	96.878	0.16316					218	62	4	0	0	0	0.72739	1	9790	9790		27.047	1.4733	1	2156900	+		64441	21751	42847	42865	73084	73084					0.12211243991373522
VSKLDLEAGFI	11	Unmodified	_VSKLDLEAGFI_					0	0	0		ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	596.3328247070312	2	596.334621	1190.65469	0.92114	0.00054931	-3.824	-0.0022804	-2.9029	-0.0017311	596.332211200373	95.986	3.6536	96.217	95.188	98.841	0.23103					249	85	4	0	0	0	0.41466	1	9846	9846		58.23	8.6939	1	1402200			64442	774	42848	42866	73085	73085					0.06698836991768076
VSKLDLEAGFI	11	Unmodified	_VSKLDLEAGFI_					0	0	0		ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	596.3331298828125	2	596.334621	1190.65469	-1.3013	-0.00077598	-1.6351	-0.00097509	-2.9364	-0.0017511	596.3335316328556	96.129	3.5172	96.331	95.353	98.87	0.20242					227	81	4	0	0	0	0.72106	1	9902	9902		28.081	2.5074	1	1353000			64443	774	42848	42866	73086	73086					0.06698836991768076
VSKLDLEAGFI	11	Unmodified	_VSKLDLEAGFI_					0	0	0		ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.33251953125	2	596.334621	1190.65469	0.54724	0.00032634	-3.2869	-0.0019601	-2.7397	-0.0016338	596.3325172883492	95.985	3.4694	96.39	95.216	98.686	0.40451					232	84	4	0	0	0	0.62614	1	11565	11565		41.427	0.64845	1	1225200			64444	774	42848	42866	73087	73087					0.06698836991768076
VSKLFDENEF	10	Unmodified	_VSKLFDENEF_					0	0	0			REV__ENSG00000159339|ENST00000375448|PADI4	REV__ENSG00000159339|ENST00000375448|PADI4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	614.2985229492188	2	614.298236	1226.58192	1.149	0.00070583	-0.85789	-0.000527	0.29112	0.00017883	614.2975668786466	76.006	0.74513	76.131	75.803	76.548	0.12485					59	22	3	0	0	0	0.51401	1	7080	7080		54.722	6.7628	1	471350	+		64445	20656	42849	42867	73088	73088					-0.02230916801681815
VSKLRLIML	9	Unmodified	_VSKLRLIML_					0	0	0			REV__nc|ENSG00000082556|P41145-2|OPRK1	REV__nc|ENSG00000082556|P41145-2|OPRK1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1649780273438	2	536.849187	1071.68382	-0.092116	-4.9453E-05	2.8188	0.0015132	2.7266	0.0014638	537.3521866769962	23.721	0.1414	23.774	23.685	23.827	0.05291					6	5	2	0	0	0	0.20789	1	766	766		14.865	0	1	22071	+		64446	16842	42850	42868	73089	73089					0.15084702807052963
VSKMLHVD	8	Unmodified	_VSKMLHVD_					0	0	0		ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-3|RPS6KA1;ENSG00000071242|ENST00000265678|RPS6KA2;nc|ENSG00000071242|Q15349-3|RPS6KA2;nc|ENSG00000071242|Q15349-2|RPS6KA2;ENST00000509742.1_1_6:166826252-166837415:-|nuORF;nc|ENSG00000117676|Q15418-4|RPS6KA1;ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1	ENSG00000177189|ENST00000379565|RPS6KA3;nc|ENSG00000117676|Q15418-4|RPS6KA1	nc|ENSG00000117676|Q15418-4|RPS6KA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.7478942871094	2	464.74967	927.484787	0.42856	0.00019917	-3.8072	-0.0017694	-3.3786	-0.0015702	464.7476979311871	27.467	0.4567	27.508	27.277	27.733	0.040834					26	14	3	0	0	0	0.8621	1	1252	1252		26.693	1.2427	1	54961			64447	7125;2996	42851	42869	73090	73090					0.01814442508339198
VSKMPGGAHI	10	Unmodified	_VSKMPGGAHI_					0	0	0			REV__nc|ENSG00000120910|P48454-2|PPP3CC	REV__nc|ENSG00000120910|P48454-2|PPP3CC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.7710876464844	2	498.768394	995.522236	4.52	0.0022544	1.0769	0.00053715	5.597	0.0027916	498.7687991567947	107.1	1.0481	107.25	106.87	107.92	0.14929					78	38	3	0	0	0	0.77314	1	13103	13103		40.778	8.8233	1	806790	+		64448	18437	42852	42870	73091	73091					0.02429533773977255
VSKPLEDI	8	Unmodified	_VSKPLEDI_					0	0	0		nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-4|SVIL;nc|ENSG00000197321|O95425-3|SVIL;ENSG00000197321|ENST00000355867|SVIL;ENSG00000234814.8,SVIL2P,chr10,+,I7.1,30689502,30691073|20|16.33|2|intron;ENSG00000234814.8,SVIL2P,chr10,+,I7.1,30689502,30691073|20|16.33|5|intron;ENSG00000234814.8,SVIL2P,chr10,+,I7.1,30689502,30691073|20|16.33|1|intron;ENSG00000234814.8,SVIL2P,chr10,+,I7.1,30689502,30691073|20|16.33|3|intron;ENSG00000234814.8,SVIL2P,chr10,+,I7.1,30689502,30691073|20|16.33|4|intron	nc|ENSG00000197321|O95425-2|SVIL	nc|ENSG00000197321|O95425-2|SVIL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.7555236816406	2	450.755475	899.496398	-0.14135	-6.3713E-05	-2.6678	-0.0012025	-2.8092	-0.0012662	450.75415967317406	81.588	3.9753	81.653	80.313	84.288	0.064384					208	95	3	0	0	0	0.87064	1	7883	7883		29.15	3.6994	1	337080			64449	8152	42853	42871	73092	73092					0.0426296280331826
VSLANTKH	8	Unmodified	_VSLANTKH_					0	0	0		nc|ENSG00000002079|Q9H6N6|MYH16	nc|ENSG00000002079|Q9H6N6|MYH16	nc|ENSG00000002079|Q9H6N6|MYH16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.24560546875	2	435.245609	868.476666	-1.0875	-0.00047334	1.0568	0.00045997	-0.030712	-1.3367E-05	435.24592093978197	47.407	1.4414	47.878	47.432	48.873	0.47139					84	35	4	0	0	0	0.72312	1	4525	4525		66.429	7.6473	1	7743100			64450	14728	42854	42872	73093	73093					0.037166315832337204
VSLCYKFLS	9	Unmodified	_VSLCYKFLS_					0	0	0		ENSG00000197601|ENST00000354817|FAR1	ENSG00000197601|ENST00000354817|FAR1	ENSG00000197601|ENST00000354817|FAR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.279541015625	2	530.280803	1058.54705	0.61239	0.00032474	1.6124	0.00085502	2.2248	0.0011798	530.2815994121593	76.378	0.57333	76.511	76.205	76.779	0.13325					30	18	2	0	0	0	0.44421	1	7154	7154		54.776	1.4249	1	112310			64451	8181	42855	42873	73094	73094					0.020121688566632656
VSLELSPLK	9	Unmodified	_VSLELSPLK_					0	0	0			REV__ENST00000246151.8_1_1:24114355-24114448:+|nuORF	REV__ENST00000246151.8_1_1:24114355-24114448:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.75921630859375	2	493.30005	984.585547	0.11336	5.592E-05	-4.2085	-0.0020761	-4.0952	-0.0020201	493.2975569929012	17.28	0.27253	16.798	16.579	16.851	-0.48256					6	5	2	0	0	0	0.20789	1	234	234		21.96	4.4919	1	14714	+		64452	24258	42856	42874	73095	73095					0.09263797762866943
VSLGPSSPAHG	11	Unmodified	_VSLGPSSPAHG_					0	0	0			REV__ENST00000515130.5_1_4:128886407-128887124:-|nuORF	REV__ENST00000515130.5_1_4:128886407-128887124:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	504.3478088378906	2	504.759081	1007.50361	-0.023774	-1.2E-05	-0.11844	-5.9783E-05	-0.14221	-7.1783E-05	504.75862668503703	35.688	0.5481	35.676	35.472	36.02	-0.012203					16	11	2	0	0	0	0.17551	1	2253	2253		23.523	0.48021	1	34477	+		64453	28025	42857	42875	73096	73096					0.00015695403760673798
VSLGPSSPAHG	11	Unmodified	_VSLGPSSPAHG_					0	0	0			REV__ENST00000515130.5_1_4:128886407-128887124:-|nuORF	REV__ENST00000515130.5_1_4:128886407-128887124:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	504.759081	1007.50361	-0.5946	-0.00030013	-0.19507	-9.8462E-05	-0.78967	-0.00039859	504.7587006578163	35.76	0.59507	35.704	35.514	36.109	-0.055901	0.007928	-0.00048367	NaN	23.523	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43389	+		64454	28025	42857	42875							0.00015695403760673798
VSLGPSSPAHG	11	Unmodified	_VSLGPSSPAHG_					0	0	0			REV__ENST00000515130.5_1_4:128886407-128887124:-|nuORF	REV__ENST00000515130.5_1_4:128886407-128887124:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	504.759081	1007.50361	-1.7449	-0.00088077	1.3007	0.00065654	-0.44423	-0.00022423	504.7598261891111	35.7	0.45793	35.709	35.431	35.889	0.0092773	0.012298	0.0010263	NaN	23.523	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24964	+		64455	28025	42857	42875							0.00015695403760673798
VSLILIPPRIS	11	Unmodified	_VSLILIPPRIS_					0	0	0			REV__nc|ENSG00000146453|Q8NA58|PNLDC1	REV__nc|ENSG00000146453|Q8NA58|PNLDC1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3665771484375	2	604.392273	1206.76999	-0.16886	-0.00010206	-0.60361	-0.00036482	-0.77247	-0.00046687	604.3915131836643	105.01	0.89935	105.01	104.91	105.81	0					32	20	2	0	0	0	0.17294	1	10928	10928		19.263	0.15916	1	274260	+		64456	20018	42858	42876	73097	73097					0.1748798591340801
VSLISKRRSYR	11	Unmodified	_VSLISKRRSYR_					0	0	0			REV__ENST00000569430.6_3_16:28505449-28506076:-|nuORF	REV__ENST00000569430.6_3_16:28505449-28506076:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6069030761719	3	455.608882	1363.80482	-1.2119	-0.00055217	0.09675	4.408E-05	-1.1152	-0.00050809	455.60886736440665	69.858	0.64455	69.993	69.847	70.492	0.13506					53	32	2	0	0	0	0.73277	1	6337	6337		25.892	3.3301	1	1122400	+		64457	28912	42859	42877	73098	73098					0.13746621774066625
VSLISKRRSYR	11	Unmodified	_VSLISKRRSYR_					0	0	0			REV__ENST00000569430.6_3_16:28505449-28506076:-|nuORF	REV__ENST00000569430.6_3_16:28505449-28506076:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	455.6080017089844	3	455.608882	1363.80482	-1.2087	-0.00055071	0.20199	9.203E-05	-1.0067	-0.00045868	455.6088629206426	71.18	2.4746	71.313	70.49	72.965	0.13356					216	101	3	0	0	0	0.72891	1	6459	6459		26.753	4.1915	1	705050	+		64458	28912	42859	42877	73099	73099					0.13746621774066625
VSLKMILTN	9	Unmodified	_VSLKMILTN_					0	0	0		nc|ENSG00000152894|Q15262|PTPRK;ENSG00000152894|ENST00000368226|PTPRK;nc|ENSG00000152894|Q15262-3|PTPRK;nc|ENSG00000152894|Q15262-4|PTPRK;ENST00000531050.5_1_6:128321419-128718758:-|nuORF;ENST00000524534.5_1_6:128384662-128841530:-|nuORF;ENST00000524481.5_1_6:128321419-128841710:-|nuORF	nc|ENSG00000152894|Q15262|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.80364990234375	2	509.801903	1017.58925	0.9788	0.00049899	2.5641	0.0013072	3.5429	0.0018062	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.73802	1	8617	8617		37.812	0	1	979740			64459	5202	42860	42878	73100	73100					0.08116144265056846
VSLKWRPP	8	Unmodified	_VSLKWRPP_					0	0	0		nc|ENSG00000134571|Q14896-2|MYBPC3;ENSG00000134571|ENST00000545968|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7952575683594	2	491.795269	981.575986	-1.6029	-0.00078829	2.358	0.0011597	0.75513	0.00037137	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.81548	1	3398	3398		20.482	1.1219	1	603870			64460	3945	42861	42879	73101	73101					0.08446074267988024
VSLLATGAAMV	11	Unmodified	_VSLLATGAAMV_					0	0	0		ENSG00000081760|ENST00000316519|AACS;nc|ENSG00000081760|Q86V21-2|AACS;ENST00000316543.14_1_12:125591673-125609365:+|nuORF	ENSG00000081760|ENST00000316519|AACS	ENSG00000081760|ENST00000316519|AACS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.7936401367188	2	516.791535	1031.56852	-0.047699	-2.465E-05	3.5768	0.0018485	3.5291	0.0018238	516.793282030647	86.386	2.8071	86.453	84.68	87.487	0.067436					129	64	3	0	0	0	0.72918	1	8797	8797		26.693	3.1702	1	264930			64461	1467	42862	42880	73102	73102					0.053995538853769176
VSLLPLGSD	9	Unmodified	_VSLLPLGSD_					0	0	0			REV__ENST00000489327.1_1_2:69705990-69736406:-|nuORF	REV__ENST00000489327.1_1_2:69705990-69736406:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.7560119628906	2	450.755475	899.496398	-1.2719	-0.00057332	-1.654	-0.00074556	-2.9259	-0.0013189	450.7546758979468	81.682	3.9504	81.682	80.4	84.351	0					234	110	3	0	0	0	0.62081	1	7614	7614		45.952	1.8352	1	177450	+		64462	18167	42863	42881	73103	73103					0.042629628033296285
VSLPALQSR	9	Unmodified	_VSLPALQSR_					0	0	0		ENST00000529977.5_1_11:9164913-9166651:-|nuORF	ENST00000529977.5_1_11:9164913-9166651:-|nuORF	ENST00000529977.5_1_11:9164913-9166651:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	485.7848815917969	2	485.787641	969.56073	-0.85604	-0.00041586	-2.3032	-0.0011189	-3.1592	-0.0015347	485.7862827659192	15.717	0.35344	15.765	15.634	15.987	0.047803					21	13	2	0	0	0	0.76764	1	87	87		34.173	3.6689	1	56329			64463	13334	42864	42882	73104	73104					0.07473162680139467
VSLPDTYYL	9	Unmodified	_VSLPDTYYL_					0	0	0		ENSG00000144476|ENST00000272928|ACKR3	ENSG00000144476|ENST00000272928|ACKR3	ENSG00000144476|ENST00000272928|ACKR3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.3049926757812	2	535.773865	1069.53318	0.35447	0.00018991	0.068525	3.6714E-05	0.42299	0.00022663	535.7739050355332	51.364	0.4175	52.116	51.938	52.356	0.75174					16	9	2	0	0	0	0.20789	1	5092	5092		23.042	4.7181	1	227130			64464	4711	42865	42883	73105	73105					0.001192146292396501
VSLPLAKI	8	Unmodified	_VSLPLAKI_					0	0	0		ENSG00000034693|ENST00000367591|PEX3	ENSG00000034693|ENST00000367591|PEX3	ENSG00000034693|ENST00000367591|PEX3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.7825927734375	2	420.781296	839.54804	-0.11189	-4.7082E-05	3.7407	0.001574	3.6288	0.0015269	420.782706169146	36.147	2.1489	36.129	35.556	37.705	-0.018677					81	47	3	0	0	0	0.884	1	2317	2317		33.516	3.674	1	101430			64465	896	42866	42884	73106	73106					0.1218475128788441
VSLPPSIVIQK	11	Unmodified	_VSLPPSIVIQK_					0	0	0			REV__ENSG00000204186|ENST00000374423|ZDBF2	REV__ENSG00000204186|ENST00000374423|ZDBF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.8662719726562	2	590.868631	1179.72271	-0.64254	-0.00037966	-3.2896	-0.0019437	-3.9321	-0.0023234	590.8668149366978	103.6	3.9688	103.59	103.14	107.11	-0.0035706					325	94	6	0	0	0	0.61369	1	11206	11206		42.864	2.0861	1	52912000	+		64466	23469	42867	42885	73107	73107					0.140037066423929
VSLPTFLFLLY	11	Unmodified	_VSLPTFLFLLY_					0	0	0		nc|ENSG00000175003|O15245-4|SLC22A1;nc|ENSG00000175003|O15245-3|SLC22A1;nc|ENSG00000175003|O15245-2|SLC22A1;ENSG00000175003|ENST00000366963|SLC22A1	nc|ENSG00000175003|O15245-4|SLC22A1	nc|ENSG00000175003|O15245-4|SLC22A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	438.2574157714844	3	438.256564	1311.74786	-1.2137	-0.00053193	3.4962	0.0015322	2.2824	0.0010003	438.25809944136427	29.692	1.312	29.713	29.307	30.619	0.020784					97	29	5	0	0	0	0.67041	1	1873	1873		36.318	1.8168	1	6019900			64467	6982	42868	42886	73108	73108					0.10445761444998425
VSLPTFLFLLY	11	Unmodified	_VSLPTFLFLLY_					0	0	0		nc|ENSG00000175003|O15245-4|SLC22A1;nc|ENSG00000175003|O15245-3|SLC22A1;nc|ENSG00000175003|O15245-2|SLC22A1;ENSG00000175003|ENST00000366963|SLC22A1	nc|ENSG00000175003|O15245-4|SLC22A1	nc|ENSG00000175003|O15245-4|SLC22A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.257568359375	3	438.256564	1311.74786	0.55491	0.00024319	1.6527	0.00072433	2.2077	0.00096752	438.25727820640566	29.88	1.2979	29.791	29.362	30.659	-0.089544					102	29	5	0	0	0	0.70584	1	1915	1915		30.569	1.0181	1	6394700			64468	6982	42868	42886	73109	73109					0.10445761444998425
VSLPWLVM	8	Unmodified	_VSLPWLVM_					0	0	0		nc|ENSG00000105339|A2RUS2-2|DENND3;nc|ENSG00000105339|A2RUS2|DENND3;ENSG00000105339|ENST00000519811|DENND3;ENST00000520482.1_1_8:142168222-142185717:+|nuORF	nc|ENSG00000105339|A2RUS2-2|DENND3	nc|ENSG00000105339|A2RUS2-2|DENND3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.7674255371094	2	472.767332	943.52011	-0.93004	-0.00043969	0.65739	0.00031079	-0.27265	-0.0001289	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.86791	1	8031	8031		28.254	1.4582	1	526610			64469	2205	42869	42887	73110	73110					0.046091050361496855
VSLSGFPFTL	10	Unmodified	_VSLSGFPFTL_					0	0	0			REV__ENST00000299204.4_1_14:104025949-104026138:-|nuORF	REV__ENST00000299204.4_1_14:104025949-104026138:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.341552734375	2	534.292225	1066.5699	0.32674	0.00017457	-4.3816	-0.002341	-4.0548	-0.0021665	534.289633328542	65.999	0.51287	66.385	66.11	66.623	0.38581					14	12	2	0	0	0	0.37624	1	7158	7158		32.812	11.865	1	176920	+		64470	24740	42870	42888	73111	73111					0.039275112458199146
VSLTKIEKVF	10	Unmodified	_VSLTKIEKVF_					0	0	0		nc|ENSG00000118369|Q9P2H5-2|USP35;ENSG00000118369|ENST00000529308|USP35	nc|ENSG00000118369|Q9P2H5-2|USP35	nc|ENSG00000118369|Q9P2H5-2|USP35	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3549194335938	2	582.355357	1162.69616	0.75692	0.00044079	-3.4476	-0.0020077	-2.6906	-0.0015669	582.3532376593708	103.08	2.584	103.3	103	105.58	0.22556					189	68	3	0	0	0	0.86587	1	12515	12515		29.17	5.6474	1	7736200			64471	3025	42871	42889	73112	73112					0.12132017751082458
VSLTLVPVV	9	Unmodified	_VSLTLVPVV_					0	0	0			REV__ENST00000543253.5_1_X:101969527-101969605:+|nuORF	REV__ENST00000543253.5_1_X:101969527-101969605:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8007507324219	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3044	3044		13.775	0.81615	1	890090	+		64472	28505	42872	42890	73113	73113					0.11905003113804469
VSLTLVPVV	9	Unmodified	_VSLTLVPVV_					0	0	0			REV__ENST00000543253.5_1_X:101969527-101969605:+|nuORF	REV__ENST00000543253.5_1_X:101969527-101969605:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.80029296875	2	463.799686	925.584819	-1.356	-0.00062891	2.7368	0.0012693	1.3808	0.00064042	463.8008126700971	41.516	1.4901	41.52	41.125	42.615	0.003418					87	36	3	0	0	0	0.7932	1	3140	3140		8.2313	0	1	533600	+		64473	28505	42872	42890	73114	73114					0.11905003113804469
VSLTLVPVV	9	Unmodified	_VSLTLVPVV_					0	0	0			REV__ENST00000543253.5_1_X:101969527-101969605:+|nuORF	REV__ENST00000543253.5_1_X:101969527-101969605:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.79998779296875	2	463.799686	925.584819	-0.080206	-3.7199E-05	1.9522	0.00090541	1.8719	0.00086821	463.80040731335265	41.41	1.3196	41.365	40.954	42.273	-0.045467					80	38	3	0	0	0	0.7932	1	2778	2778		19.36	1.0356	1	417210	+		64474	28505	42872	42890	73115	73115					0.11905003113804469
VSLTQSIH	8	Unmodified	_VSLTQSIH_					0	0	0			REV__chr2:187560873-187565550|14|20.43|0.0|20.96|-|1|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|9	REV__chr2:187560873-187565550|14|20.43|0.0|20.96|-|1|TE_info:HERVH-int,HERVH-int_dup805,ERV1,LTR,acceptor,-,187558389,187560873|None,TFPI|9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.7445983886719	2	442.745442	883.476331	-0.15284	-6.7668E-05	-1.1626	-0.00051472	-1.3154	-0.00058239	442.74476041803246	90.258	0.92232	90.327	90.04	90.962	0.069328					49	21	3	0	0	0	0.89494	1	9259	9259		37.159	1.5408	1	421830	+		64475	15742	42873	42891	73116	73116					0.029932118633610116
VSLVRVRHEL	10	Unmodified	_VSLVRVRHEL_					0	0	0			REV__ENST00000463795.5_1_22:30682689-30685486:-|nuORF	REV__ENST00000463795.5_1_22:30682689-30685486:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3719482421875	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.13	1	117.11	116.61	117.61	-0.02433								0	0	0	0.45132	1	12974	12974		22.58	4.3176	1		+		64476	23801	42874	42892	73117	73117					0.12459876308275852
VSNGLLLLC	9	Carbamidomethyl (C)	_VSNGLLLLC(Carbamidomethyl (C))_	VSNGLLLLC(1)		VSNGLLLLC(48)		0	1	0		ENST00000491703.5_1_21:35279611-35286837:-|nuORF	ENST00000491703.5_1_21:35279611-35286837:-|nuORF	ENST00000491703.5_1_21:35279611-35286837:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.7796936035156	2	494.778428	987.542302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.24	1	87.39	86.89	87.89	0.14956								0	0	0	0.35186	1	8614	8614		47.916	10.104	1				64477	12687	42875	42893	73118	73118	164				0.0480328471392113
VSNKHPFV	8	Unmodified	_VSNKHPFV_					0	0	0		nc|ENSG00000155792|Q8TB45-2|DEPTOR;ENSG00000155792|ENST00000286234|DEPTOR	nc|ENSG00000155792|Q8TB45-2|DEPTOR	nc|ENSG00000155792|Q8TB45-2|DEPTOR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2538146972656	2	464.255977	926.497401	-1.1813	-0.00054845	-2.9805	-0.0013837	-4.1619	-0.0019322	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.91977	1	8038	8038		45.952	3.5558	1	946850			64478	5341	42876	42894	73119	73119					0.031212219629082938
VSNMLQKAR	9	Unmodified	_VSNMLQKAR_					0	0	0		ENST00000468862.5_1_3:159706816-159710915:+|nuORF;ENST00000496308.1_1_3:159706816-159711351:+|nuORF;ENSG00000168811|ENST00000699704|IL12A	ENST00000468862.5_1_3:159706816-159710915:+|nuORF	ENST00000468862.5_1_3:159706816-159710915:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7939453125	2	523.792401	1045.57025	1.1929	0.00062481	1.6583	0.00086859	2.8511	0.0014934	523.7931742755334	19.706	1.4854	19.236	18.928	20.414	-0.46967					77	32	3	0	0	0	0.76764	1	594	594		34.173	0	1	1002100			64479	6439	42877	42895	73120	73120					0.04928607694000675
VSNNKPVR	8	Unmodified	_VSNNKPVR_					0	0	0			REV__ENST00000245046.6_1_3:10004387-10004693:-|nuORF	REV__ENST00000245046.6_1_3:10004387-10004693:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2627868652344	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.8347	1	8483	8483		23.042	2.0956	1	4511100	+		64480	24249	42878	42896	73121	73121					0.05435722848858404
VSNRKRKRKVF	11	Unmodified	_VSNRKRKRKVF_					0	0	0		ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	ENSG00000118058|ENST00000534358|KMT2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	473.29913330078125	3	473.300271	1416.87898	-1.7019	-0.00080553	-0.65367	-0.00030938	-2.3556	-0.0011149	473.2998390054578	107.66	0.60316	107.7	107.33	107.93	0.036125					45	14	5	0	0	0	0.79224	1	11507	11507		12.957	3.3113	1	2578500			64481	3009	42879	42897	73122	73122					0.18722009656244154
VSNVHNLNSV	10	Unmodified	_VSNVHNLNSV_					0	0	0		nc|ENSG00000276045|Q96D31-2|ORAI1;ENSG00000276045|ENST00000617316|ORAI1	nc|ENSG00000276045|Q96D31-2|ORAI1	nc|ENSG00000276045|Q96D31-2|ORAI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.785400390625	2	541.783087	1081.55162	-0.22268	-0.00012064	4.2763	0.0023168	4.0536	0.0021962	541.7852590351226	56.903	1.7601	56.891	56.59	58.35	-0.012203					157	62	4	0	0	0	0.045977	4	5119	5089;5107;5119;5166		109.48	5.4215	1	5602900			64482	9010	42880	42898	73123;73124;73125;73126	73125					0.014107693237974672
VSNVHNLNSV	10	Unmodified	_VSNVHNLNSV_					0	0	0		nc|ENSG00000276045|Q96D31-2|ORAI1;ENSG00000276045|ENST00000617316|ORAI1	nc|ENSG00000276045|Q96D31-2|ORAI1	nc|ENSG00000276045|Q96D31-2|ORAI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7850341796875	2	541.783087	1081.55162	0.62479	0.0003385	3.3885	0.0018358	4.0132	0.0021743	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.081281	3	5236	5208;5236;5270		104.06	2.7734	1	5802700			64483	9010	42880	42898	73127;73128;73129	73128					0.014107693237974672
VSNVHNLNSV	10	Unmodified	_VSNVHNLNSV_					0	0	0		nc|ENSG00000276045|Q96D31-2|ORAI1;ENSG00000276045|ENST00000617316|ORAI1	nc|ENSG00000276045|Q96D31-2|ORAI1	nc|ENSG00000276045|Q96D31-2|ORAI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	541.7852783203125	2	541.783087	1081.55162	-0.1772	-9.6005E-05	4.2322	0.0022929	4.055	0.0021969	541.7852873202811	56.84	2.4261	56.873	56.56	58.986	0.033184					182	81	4	0	0	0	0.16557	2	5130	5130;5199		93.143	0	1	6132200			64484	9010	42880	42898	73130;73131	73130					0.014107693237974672
VSPALLLLG	9	Unmodified	_VSPALLLLG_					0	0	0			REV__nc|ENSG00000136827|O14656-2|TOR1A	REV__nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	441.7878723144531	2	441.786579	881.558604	-1.8594	-0.00082144	4.3823	0.001936	2.5229	0.0011146	441.78838292113096	41.568	3.4004	41.568	40.71	44.111	0					294	91	5	0	0	0	0.76996	1	2933	2933		33.516	0	1	11085000	+		64485	19339	42881	42899	73132	73132					0.11308733942337312
VSPALLLLG	9	Unmodified	_VSPALLLLG_					0	0	0			REV__nc|ENSG00000136827|O14656-2|TOR1A	REV__nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.78765869140625	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.7932	1	3555	3555		26.796	1.3459	1	493390	+		64486	19339	42881	42899	73133	73133					0.11308733942337312
VSPALLLLG	9	Unmodified	_VSPALLLLG_					0	0	0			REV__nc|ENSG00000136827|O14656-2|TOR1A	REV__nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78790283203125	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	1	2446	2446		17.365	4.4058	1	11532000	+		64487	19339	42881	42899	73134	73134					0.11308733942337312
VSPALLLLG	9	Unmodified	_VSPALLLLG_					0	0	0			REV__nc|ENSG00000136827|O14656-2|TOR1A	REV__nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.78790283203125	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.77546	1	3227	3227		31.955	2.1133	1	448230	+		64488	19339	42881	42899	73135	73135					0.11308733942337312
VSPALLLLG	9	Unmodified	_VSPALLLLG_					0	0	0			REV__nc|ENSG00000136827|O14656-2|TOR1A	REV__nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7879333496094	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.7932	1	2407	2407		25.45	0	1	12467000	+		64489	19339	42881	42899	73136	73136					0.11308733942337312
VSPALLLLG	9	Unmodified	_VSPALLLLG_					0	0	0			REV__nc|ENSG00000136827|O14656-2|TOR1A	REV__nc|ENSG00000136827|O14656-2|TOR1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.78765869140625	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.7932	2	3226	3151;3226		24.203	0.89182	1	54520000	+		64490	19339	42881	42899	73137;73138	73138					0.11308733942337312
VSPEAVEL	8	Unmodified	_VSPEAVEL_					0	0	0			REV__ENSG00000198917|ENST00000361256|SPOUT1	REV__ENSG00000198917|ENST00000361256|SPOUT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.22711181640625	2	422.226551	842.438549	1.4046	0.00059308	2.1622	0.00091294	3.5668	0.001506	422.2272983859282	64.331	2.0044	64.358	63.19	65.195	0.027138					107	65	3	0	0	0	0.85277	1	6030	6030		25.45	0	1	528250	+		64491	23413	42882	42900	73139	73139					0.011027008779137759
VSPEILQLI	9	Unmodified	_VSPEILQLI_					0	0	0			REV__ENSG00000198626|ENST00000366574|RYR2	REV__ENSG00000198626|ENST00000366574|RYR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	506.3088073730469	2	506.307875	1010.6012	-2.0618	-0.0010439	4.0707	0.002061	2.0089	0.0010171	506.3097854879906	39.644	1.6042	39.654	38.716	40.32	0.0092812					68	37	3	0	0	0	0.78536	1	2829	2829		29.15	0	1	97666	+		64492	23347	42883	42901	73140	73140					0.09632084279917308
VSPEILQLI	9	Unmodified	_VSPEILQLI_					0	0	0			REV__ENSG00000198626|ENST00000366574|RYR2	REV__ENSG00000198626|ENST00000366574|RYR2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3114013671875	2	506.307875	1010.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.654	1	60.754	60.254	61.254	0.10082								0	0	0	0.30416	1	5257	5257		29.15	0	1		+		64493	23347	42883	42901	73141	73141					0.09632084279917308
VSPFPKRHLFR	11	Unmodified	_VSPFPKRHLFR_					0	0	0		ENST00000449606.5_1_16:23534653-23534791:-|nuORF	ENST00000449606.5_1_16:23534653-23534791:-|nuORF	ENST00000449606.5_1_16:23534653-23534791:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.5778503417969	3	461.938451	1382.79352	0.09938	4.5907E-05	-2.0847	-0.00096301	-1.9853	-0.0009171	461.93833337678745	29.986	0.82284	29.896	29.619	30.442	-0.089544					34	18	3	0	0	0	0.17586	1	1991	1991		16.53	10.529	1	245010			64494	11877	42884	42902	73142	73142					0.11743844470584008
VSPFPKRHLFR	11	Unmodified	_VSPFPKRHLFR_					0	0	0		ENST00000449606.5_1_16:23534653-23534791:-|nuORF	ENST00000449606.5_1_16:23534653-23534791:-|nuORF	ENST00000449606.5_1_16:23534653-23534791:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	461.938451	1382.79352	-1.4195	-0.00065573	-1.6785	-0.00077538	-3.0981	-0.0014311	461.9376686041712	29.885	0.61056	29.914	29.575	30.185	0.028618	0.0089638	3.8276E-05	NaN	21.032	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120630			64495	11877	42884	42902							0.11743844470584008
VSPGPWGL	8	Unmodified	_VSPGPWGL_					0	0	0		ENSG00000182253|ENST00000336292|SYNM;nc|ENSG00000182253|O15061-2|SYNM	ENSG00000182253|ENST00000336292|SYNM	ENSG00000182253|ENST00000336292|SYNM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.7164306640625	2	406.718696	811.422839	-1.6093	-0.00065452	-4.2628	-0.0017338	-5.8721	-0.0023883	406.71680117941077	58.725	0.62392	58.725	58.407	59.031	0					47	29	2	0	0	0	0.88915	1	5094	5094		35.201	0	1	53824			64496	7439	42885	42903	73143	73143					0.009584591515135799
VSPGPWGL	8	Unmodified	_VSPGPWGL_					0	0	0		ENSG00000182253|ENST00000336292|SYNM;nc|ENSG00000182253|O15061-2|SYNM	ENSG00000182253|ENST00000336292|SYNM	ENSG00000182253|ENST00000336292|SYNM	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	406.718696	811.422839	1.5073	0.00061303	-7.6536	-0.0031129	-6.1463	-0.0024998	406.715474058439	58.746	0.68288	58.78	58.494	59.177	0.033909	0.016329	-0.0019137	NaN	35.201	32	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41756			64497	7439	42885	42903							0.009584591515135799
VSPGPWGL	8	Unmodified	_VSPGPWGL_					0	0	0		ENSG00000182253|ENST00000336292|SYNM;nc|ENSG00000182253|O15061-2|SYNM	ENSG00000182253|ENST00000336292|SYNM	ENSG00000182253|ENST00000336292|SYNM	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	406.718696	811.422839	-1.8681	-0.0007598	-4.168	-0.0016952	-6.0362	-0.002455	406.71687293093686	58.686	0.44539	58.773	58.576	59.021	0.087002	0.0098109	0.00092154	NaN	35.201	36	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	60276			64498	7439	42885	42903							0.009584591515135799
VSPGPWGL	8	Unmodified	_VSPGPWGL_					0	0	0		ENSG00000182253|ENST00000336292|SYNM;nc|ENSG00000182253|O15061-2|SYNM	ENSG00000182253|ENST00000336292|SYNM	ENSG00000182253|ENST00000336292|SYNM	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	406.718696	811.422839	0.35376	0.00014388	-6.0057	-0.0024426	-5.6519	-0.0022987	406.7160374498085	58.678	0.41358	58.789	58.503	58.917	0.11027	0.024967	-0.00057325	NaN	35.201	23	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63220			64499	7439	42885	42903							0.009584591515135799
VSPGPWGL	8	Unmodified	_VSPGPWGL_					0	0	0		ENSG00000182253|ENST00000336292|SYNM;nc|ENSG00000182253|O15061-2|SYNM	ENSG00000182253|ENST00000336292|SYNM	ENSG00000182253|ENST00000336292|SYNM	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	406.718696	811.422839	-0.88705	-0.00036078	-5.3077	-0.0021587	-6.1947	-0.0025195	406.716461171998	58.759	0.47987	58.751	58.478	58.958	-0.0074387	-0.012275	-5.4937E-06	NaN	35.201	35	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54975			64500	7439	42885	42903							0.009584591515135799
VSPIQLLI	8	Unmodified	_VSPIQLLI_					0	0	0		ENST00000558184.1_1_15:90021028-90029524:-|nuORF;ENSG00000140519|ENST00000268122|RHCG	ENST00000558184.1_1_15:90021028-90029524:-|nuORF	ENST00000558184.1_1_15:90021028-90029524:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.7877197265625	2	441.786579	881.558604	-1.0043	-0.00044368	3.7245	0.0016454	2.7202	0.0012018	441.7880966601045	44.736	2.5974	44.703	43.537	46.134	-0.033474					136	60	3	0	0	0	0.81548	2	3637	3518;3637		20.482	0	1	539980			64501	4439	42886	42904	73144;73145	73145					0.11308733942325944
VSPIQLLI	8	Unmodified	_VSPIQLLI_					0	0	0		ENST00000558184.1_1_15:90021028-90029524:-|nuORF;ENSG00000140519|ENST00000268122|RHCG	ENST00000558184.1_1_15:90021028-90029524:-|nuORF	ENST00000558184.1_1_15:90021028-90029524:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.78790283203125	2	441.786579	881.558604	0.18633	8.2319E-05	2.7415	0.0012112	2.9278	0.0012935	441.7877627721463	37.818	2.1542	38.34	37.867	40.021	0.52235					194	52	5	0	0	0	0.81548	1	3213	3213		20.482	0	1	54520000			64502	4439	42886	42904	73146	73146					0.11308733942325944
VSPISPSLLV	10	Unmodified	_VSPISPSLLV_					0	0	0			REV__nc|ENSG00000143514|Q13625-2|TP53BP2	REV__nc|ENSG00000143514|Q13625-2|TP53BP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.3088684082031	2	506.307875	1010.6012	-1.1173	-0.00056567	3.1798	0.00161	2.0626	0.0010443	506.3094009229767	39.624	1.765	39.58	38.74	40.505	-0.043697					82	41	3	0	0	0	0.85694	1	2866	2866		21.96	1.013	1	93842	+		64503	19819	42887	42905	73147	73147					0.09632084279905939
VSPIVLPHLG	10	Unmodified	_VSPIVLPHLG_					0	0	0			REV__nc|ENSG00000060237|Q9H4A3-5|WNK1	REV__nc|ENSG00000060237|Q9H4A3-5|WNK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.31396484375	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86305	1	12394	12394		31.955	2.8053	1	4038100	+		64504	29696	42888	42906	73148	73148					0.10343210236646883
VSPIVVVGL	9	Unmodified	_VSPIVVVGL_					0	0	0			REV__ENST00000262056.13_1_12:53434781-53434886:+|nuORF	REV__ENST00000262056.13_1_12:53434781-53434886:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7878723144531	2	441.786579	881.558604	-0.067532	-2.9835E-05	3.0982	0.0013687	3.0306	0.0013389	441.78783875522674	39.117	2.2562	39.065	38.508	40.764	-0.052731					228	70	6	0	0	0	0.7932	1	2511	2511		25.45	0	1	12467000	+		64505	24406	42889	42907	73149	73149					0.11308733942325944
VSPKYHWC	8	Unmodified	_VSPKYHWC_					0	0	0		ENST00000511359.1_1_5:23305177-23305237:-|nuORF;ENST00000392597.5_1_12:112856770-112884139:+|nuORF	ENST00000511359.1_1_5:23305177-23305237:-|nuORF	ENST00000511359.1_1_5:23305177-23305237:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	510.2398986816406	2	510.242012	1018.46947	-1.6359	-0.00083471	-2.714	-0.0013848	-4.3499	-0.0022195	510.24047734070734	36.379	0.77333	36.379	36.181	36.955	0					24	17	2	0	0	0	0.91005	1	2111	2111		42.474	0.078325	1	90149			64506	11028	42890	42908	73150	73150					-0.03902424288844486
VSPLAPPLRRF	11	Unmodified	_VSPLAPPLRRF_					0	0	0		ENSG00000006611|ENST00000005226|USH1C	ENSG00000006611|ENST00000005226|USH1C	ENSG00000006611|ENST00000005226|USH1C	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.8720703125	2	626.879865	1251.74518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.926	1	52.996	52.496	53.496	0.070713								0	0	0	0.56276	1	4295	4295		23.523	0.94304	1				64507	705	42891	42909	73151	73151					0.1293735083067986
VSPLRHVN	8	Unmodified	_VSPLRHVN_					0	0	0		ENST00000437297.1_1_X:6340204-6340327:-|nuORF	ENST00000437297.1_1_X:6340204-6340327:-|nuORF	ENST00000437297.1_1_X:6340204-6340327:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	461.264892578125	2	461.266876	920.519199	0.69547	0.0003208	-4.4847	-0.0020686	-3.7892	-0.0017478	461.26462211662977	92.954	1.3754	93.113	92.667	94.042	0.15875					93	32	4	0	0	0	0.86677	1	9449	9449		27.882	2.4321	1	970790			64508	11736	42892	42910	73152	73152					0.0557602671146924
VSPLRQRKA	9	Unmodified	_VSPLRQRKA_					0	0	0			REV__ENSG00000182095|ENST00000430969|TNRC18	REV__ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.3284912109375	2	527.827632	1053.64071	0.25095	0.00013246	-1.3005	-0.00068645	-1.0496	-0.00055399	528.3273146128608	37.956	0.87725	37.898	37.695	38.573	-0.057915					51	27	2	0	0	0	0.78983	1	2209	2209		27.882	0	1	262590	+		64509	22499	42893	42911	73153	73153					0.11603649074004352
VSPLRQRKA	9	Unmodified	_VSPLRQRKA_					0	0	0			REV__ENSG00000182095|ENST00000430969|TNRC18	REV__ENSG00000182095|ENST00000430969|TNRC18	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	527.827632	1053.64071	0.25095	0.00013246	-1.3005	-0.00068645	-1.0496	-0.00055399	528.3273146128608	37.956	0.87725	37.898	37.695	38.573	-0.057915	-0.0063095	8.4683E-05	NaN	27.882	51	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	262590	+		64510	22499	42893	42911							0.11603649074004352
VSPLTGGYSH	10	Unmodified	_VSPLTGGYSH_					0	0	0			REV__ENSG00000054219|ENST00000263636|LY75	REV__ENSG00000054219|ENST00000263636|LY75	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.2679748535156	2	509.253631	1016.49271	0.51524	0.00026239	-3.2478	-0.001654	-2.7326	-0.0013916	509.25173900518695	54.731	1.3804	55.299	54.901	56.281	0.56836					65	32	3	0	0	0	0.37624	1	5737	5737		14.137	0	1	656960	+		64511	16397	42894	42912	73154	73154					-0.014877069705107715
VSPLVLLST	9	Unmodified	_VSPLVLLST_					0	0	0			REV__ENST00000542400.5_1_12:125435197-125437195:-|nuORF	REV__ENST00000542400.5_1_12:125435197-125437195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	464.7909240722656	2	464.789318	927.564084	-1.14	-0.00052988	4.1432	0.0019257	3.0031	0.0013958	464.7911163859986	34.354	1.43	34.393	34.047	35.477	0.038643					129	56	3	0	0	0	0.78536	1	1742	1742		29.15	4.9468	1	286820	+		64512	28496	42895	42913	73155	73155					0.09740412734140591
VSPPPPLQKN	10	Unmodified	_VSPPPPLQKN_					0	0	0		ENST00000522483.2_1_19:36526344-36545129:-|nuORF;ENSG00000161277|ENST00000292894|THAP8	ENST00000522483.2_1_19:36526344-36545129:-|nuORF	ENST00000522483.2_1_19:36526344-36545129:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.8065185546875	2	538.808574	1075.60259	-0.69163	-0.00037266	-2.7906	-0.0015036	-3.4823	-0.0018763	538.8070299475025	90.865	3.8094	90.865	89.559	93.368	0					216	88	3	0	0	0	0.86218	2	8884	8758;8884		32.812	1.1189	1	563820			64513	5632	42896	42914	73156;73157	73157					0.06781718368665679
VSPPQVPQ	8	Unmodified	_VSPPQVPQ_					0	0	0		ENSG00000116254|ENST00000262450|CHD5	ENSG00000116254|ENST00000262450|CHD5	ENSG00000116254|ENST00000262450|CHD5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	427.22344970703125	2	426.23471	850.454868	4.694	0.0020007	-1.7459	-0.00074416	2.9481	0.0012566	426.2341758196067	107.06	0.70012	107.21	106.83	107.53	0.14929					41	21	3	0	0	0	0.4196	1	13078	13078		6.7355	5.5304	1	537020			64514	2911	42897	42915	73158	73158					0.0236582683467077
VSPRFLVLKSS	11	Unmodified	_VSPRFLVLKSS_					0	0	0		ENST00000414046.2_1_6:31430911-31431209:+|nuORF	ENST00000414046.2_1_6:31430911-31431209:+|nuORF	ENST00000414046.2_1_6:31430911-31431209:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	411.584228515625	3	411.583562	1231.72886	1.0715	0.00044102	0.55464	0.00022828	1.6262	0.0006693	411.58372332792885	25.568	2.1598	25.311	24.774	26.934	-0.25721					112	48	3	0	0	0	0.66858	1	1338	1338		36.528	2.4414	1	1250200			64515	11357	42898	42916	73159	73159					0.12226224873938918
VSPSLLSY	8	Unmodified	_VSPSLLSY_					0	0	0			REV__ENST00000489998.5_1_1:157765891-157772050:-|nuORF	REV__ENST00000489998.5_1_1:157765891-157772050:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	433.2557067871094	2	433.236919	864.459284	2.7183	0.0011777	3.5548	0.00154	6.2731	0.0027177	433.2373981850135	107.3	0.53648	107.27	106.97	107.51	-0.034134					24	12	3	0	0	0	0.4196	1	11900	11900		19.36	0	1	312440	+		64516	27630	42899	42917	73160	73160					0.02163291257579658
VSPSSAKVIFV	11	Unmodified	_VSPSSAKVIFV_					0	0	0		ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3300170898438	2	567.331882	1132.64921	-0.51077	-0.00028978	-3.0724	-0.0017431	-3.5832	-0.0020329	567.3300222391148	92.735	3.8088	92.735	91.548	95.357	0					399	88	6	0	0	0	0.7144	1	9120	9120		29.17	2.4771	1	11042000			64517	10912	42900	42918	73161	73161					0.08819158199935373
VSPTAVLII	9	Unmodified	_VSPTAVLII_					0	0	0			REV__ENSG00000182963|ENST00000592524|GJC1	REV__ENSG00000182963|ENST00000592524|GJC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7922668457031	2	456.791861	911.569169	0.28566	0.00013049	2.4264	0.0011084	2.7121	0.0012389	456.79282926029407	47.997	0.84348	48.035	47.79	48.633	0.037735					45	24	2	0	0	0	0.78983	1	3611	3611		27.882	3.6795	1	199350	+		64518	22563	42901	42919	73162	73162					0.10984716596760791
VSPTAVLII	9	Unmodified	_VSPTAVLII_					0	0	0			REV__ENSG00000182963|ENST00000592524|GJC1	REV__ENSG00000182963|ENST00000592524|GJC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7874450683594	2	456.791861	911.569169	-2.8446	-0.0012994	3.6569	0.0016705	0.81235	0.00037108	456.79337927026637	41.437	2.022	41.851	41.294	43.316	0.4139					109	52	4	0	0	0	0.72402	1	3652	3652		38.806	5.2906	1	8003100	+		64519	22563	42901	42919	73163	73163					0.10984716596760791
VSPTAVLII	9	Unmodified	_VSPTAVLII_					0	0	0			REV__ENSG00000182963|ENST00000592524|GJC1	REV__ENSG00000182963|ENST00000592524|GJC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79156494140625	2	456.791861	911.569169	-1.6737	-0.00076455	2.8822	0.0013166	1.2085	0.00055202	456.79302395455574	41.288	2.2955	41.922	41.391	43.687	0.6339					167	59	4	0	0	0	0.47272	1	3640	3640		53.351	9.2347	1	9370200	+		64520	22563	42901	42919	73164	73164					0.10984716596760791
VSPTIILLG	9	Unmodified	_VSPTIILLG_					0	0	0			REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.793212890625	2	456.791861	911.569169	-0.042653	-1.9484E-05	2.8269	0.0012913	2.7842	0.0012718	456.79307389883803	36.432	2.1584	36.413	35.42	37.578	-0.018673					171	47	5	0	0	0	0.62081	2	2416	2355;2416		45.952	8.7928	1	4460800	+		64521	26575	42902	42920	73165;73166	73166					0.1098471659677216
VSPTIILLG	9	Unmodified	_VSPTIILLG_					0	0	0			REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7930603027344	2	456.791861	911.569169	-0.85953	-0.00039263	3.5719	0.0016316	2.7123	0.001239	456.7934335420697	36.323	3.5767	36.267	33.824	37.401	-0.055901					213	80	5	0	0	0	0.58151	4	2482	2446;2470;2482;2494		47.916	14.4	1	4833100	+		64522	26575	42902	42920	73167;73168;73169;73170	73169					0.1098471659677216
VSPTIILLG	9	Unmodified	_VSPTIILLG_					0	0	0			REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7931213378906	2	456.791861	911.569169	-1.09	-0.00049788	3.7703	0.0017222	2.6803	0.0012244	456.7935086768371	36.547	3.494	36.558	33.881	37.375	0.011173					215	79	5	0	0	0	0.47272	7	2406	2364;2376;2394;2406;2418;2430;2442		53.351	10.756	1	4477500	+		64523	26575	42902	42920	73171;73172;73173;73174;73175;73176;73177	73174					0.1098471659677216
VSPTIILLG	9	Unmodified	_VSPTIILLG_					0	0	0			REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	456.79315185546875	2	456.791861	911.569169	-1.254	-0.00057281	4.1813	0.00191	2.9273	0.0013372	456.7936573398306	36.37	2.3574	36.393	35.161	37.518	0.023621					206	66	4	0	0	0	0.62081	5	2050	2019;2032;2050;2061;2084		45.952	6.8513	1	3484100	+		64524	26575	42902	42920	73178;73179;73180;73181;73182	73180					0.1098471659677216
VSPTIILLG	9	Unmodified	_VSPTIILLG_					0	0	0			REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	456.7930908203125	2	456.791861	911.569169	0.17991	8.2183E-05	2.7362	0.0012499	2.9161	0.001332	456.7930101461281	36.153	2.2506	36.256	35.136	37.386	0.10306					210	68	4	0	0	0	0.64922	5	2035	2001;2026;2035;2046;2066		44.117	13.613	1	3531000	+		64525	26575	42902	42920	73183;73184;73185;73186;73187	73185					0.1098471659677216
VSPTIILLG	9	Unmodified	_VSPTIILLG_					0	0	0			REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.79315185546875	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.64922	8	1995	1995;2003;2010;2025;2056;2068;2077;2089		44.117	5.3107	1	3452400	+		64526	26575	42902	42920	73188;73189;73190;73191;73192;73193;73194;73195	73188					0.1098471659677216
VSPTIILLG	9	Unmodified	_VSPTIILLG_					0	0	0			REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7931823730469	2	456.791861	911.569169	-0.077665	-3.5477E-05	3.236	0.0014782	3.1584	0.0014427	456.79322700683537	35.356	1.7647	35.603	35.091	36.856	0.24769					159	44	4	0	0	0	0.43338	4	2780	2734;2768;2780;2793		55.504	6.9577	1	6766600	+		64527	26575	42902	42920	73196;73197;73198;73199	73198					0.1098471659677216
VSPTIILLG	9	Unmodified	_VSPTIILLG_					0	0	0			REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7930908203125	2	456.791861	911.569169	-0.5708	-0.00026074	3.3989	0.0015526	2.8281	0.0012919	456.79332762585267	37.831	1.4155	38.144	37.663	39.079	0.31312					135	35	5	0	0	0	0.72402	2	3038	3038;3050		38.806	3.6435	1	9282000	+		64528	26575	42902	42920	73200;73201	73200					0.1098471659677216
VSPTIILLG	9	Unmodified	_VSPTIILLG_					0	0	0			REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.79315185546875	2	456.791861	911.569169	1.3225	0.00060413	1.789	0.00081719	3.1115	0.0014213	456.79255750887523	35.219	1.7546	35.6	35.098	36.853	0.3812					157	44	4	0	0	0	0.43338	4	2787	2763;2775;2787;2811		55.504	18.345	1	7423700	+		64529	26575	42902	42920	73202;73203;73204;73205	73204					0.1098471659677216
VSPTIILLG	9	Unmodified	_VSPTIILLG_					0	0	0			REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7929382324219	2	456.791861	911.569169	0.14837	6.7774E-05	2.6615	0.0012157	2.8099	0.0012835	456.79297860960025	37.636	1.5872	38.122	37.704	39.291	0.48581					149	39	5	0	0	0	0.74721	1	3058	3058		37.159	3.6435	1	8942200	+		64530	26575	42902	42920	73206	73206					0.1098471659677216
VSPTIILLG	9	Unmodified	_VSPTIILLG_					0	0	0			REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	REV__ENST00000427910.1_1_X:35077528-35077942:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7929992675781	2	456.791861	911.569169	-1.6737	-0.00076455	2.8822	0.0013166	1.2085	0.00055202	456.79302395455574	41.288	2.2955	41.922	41.391	43.687	0.6339					167	59	4	0	0	0	0.74721	1	3626	3626		37.159	8.0096	1	9370200	+		64531	26575	42902	42920	73207	73207					0.1098471659677216
VSPTLLLLT	9	Unmodified	_VSPTLLLLT_					0	0	0			REV__ENST00000478158.5_1_16:30371114-30377040:-|nuORF	REV__ENST00000478158.5_1_16:30371114-30377040:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80426025390625	2	478.804968	955.595384	-1.7281	-0.00082743	3.3413	0.0015998	1.6132	0.00077242	478.806439205216	41.295	1.2034	41.295	40.815	42.018	0					75	35	3	0	0	0	0.7932	1	2829	2829		17.365	0.89182	1	280900	+		64532	27372	42903	42921	73208	73208					0.11580985768239316
VSPTTMTSPI	10	Unmodified	_VSPTTMTSPI_					0	0	0		ENSG00000111644|ENST00000229243|ACRBP	ENSG00000111644|ENST00000229243|ACRBP	ENSG00000111644|ENST00000229243|ACRBP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.281982421875	2	517.26535	1032.51615	-0.55978	-0.00028955	-2.0678	-0.0010696	-2.6276	-0.0013591	517.2641250010664	43.351	0.72567	43.784	43.378	44.103	0.4334					34	17	3	0	0	0	0.37624	1	3959	3959		40.778	18.818	1	1014800			64533	2593	42904	42922	73209	73209					0.0011897075178239902
VSPVAPPPVF	10	Unmodified	_VSPVAPPPVF_					0	0	0			REV__nc|ENSG00000164244|Q96M27-4|PRRC1	REV__nc|ENSG00000164244|Q96M27-4|PRRC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.2938537597656	2	505.289485	1008.56442	0.1005	5.078E-05	3.8343	0.0019374	3.9348	0.0019882	505.29135010740674	97.203	2.3609	97.251	96.739	99.1	0.048157					135	54	4	0	0	0	0.86305	1	10436	10436		31.955	1.4512	1	1336200	+		64534	21055	42905	42923	73210	73210					0.060478324539985806
VSPVRKTTKIH	11	Unmodified	_VSPVRKTTKIH_					0	0	0		nc|nan|Q8ND61-2|C3orf20;ENSG00000131379|ENST00000253697|C3orf20	nc|nan|Q8ND61-2|C3orf20	nc|nan|Q8ND61-2|C3orf20	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.5924377441406	3	422.594461	1264.76155	-0.026175	-1.1061E-05	-4.2947	-0.0018149	-4.3209	-0.001826	422.59256755528145	49.138	2.4235	49.133	48.474	50.898	-0.0056419					208	62	5	0	0	0	0.74405	1	4052	4052		23.378	1.6922	1	1959300			64535	3727	42906	42924	73211	73211					0.13976431996798055
VSPVRKTTKIH	11	Unmodified	_VSPVRKTTKIH_					0	0	0		nc|nan|Q8ND61-2|C3orf20;ENSG00000131379|ENST00000253697|C3orf20	nc|nan|Q8ND61-2|C3orf20	nc|nan|Q8ND61-2|C3orf20	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.5921936035156	3	422.594461	1264.76155	-0.54234	-0.00022919	-3.6062	-0.001524	-4.1486	-0.0017532	422.5928449927352	47.261	3.402	47.732	47.137	50.539	0.47139					194	83	4	0	0	0	0.71803	3	4483	4458;4470;4483		28.577	4.0305	1	3501000			64536	3727	42906	42924	73212;73213;73214	73214					0.13976431996798055
VSPWAGRA	8	Unmodified	_VSPWAGRA_					0	0	0			REV__ENSG00000110237|ENST00000263674|ARHGEF17	REV__ENSG00000110237|ENST00000263674|ARHGEF17	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2281494140625	2	422.22722	842.439886	-1.6279	-0.00068734	3.5948	0.0015178	1.9669	0.00083048	422.2286431542634	57.254	2.0219	57.254	56.929	58.951	0					133	84	2	0	0	0	0.79929	1	4880	4880		18.324	0.95945	1	766060	+		64537	17803	42907	42925	73215	73215					0.012363797573243573
VSQVLQLL	8	Unmodified	_VSQVLQLL_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.28173828125	2	450.28166	898.548768	-0.14058	-6.3303E-05	-1.371	-0.00061732	-1.5116	-0.00068062	450.28088233098475	107.36	0.66506	107.32	107.04	107.7	-0.034409					39	15	3	0	0	0	0.89494	1	11731	11731		37.159	2.9866	1	421380			64538	4049	42908	42926	73216	73216					0.09543545936958253
VSQVLQLL	8	Unmodified	_VSQVLQLL_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	450.28166	898.548768	-0.96174	-0.00043305	-1.9094	-0.00085979	-2.8712	-0.0012928	450.28042317711675	107.18	0.45673	107.18	107.07	107.53	0	-0.072065	0.0013209	NaN	37.159	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	133230			64539	4049	42908	42926							0.09543545936958253
VSQVLQLL	8	Unmodified	_VSQVLQLL_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	450.28166	898.548768	2.7545	0.0012403	-4.5397	-0.0020442	-1.7853	-0.00080388	450.2793406226485	107.34	0.66563	107.3	107.06	107.72	-0.034134	0.054223	-0.0010478	NaN	37.159	32	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	312610			64540	4049	42908	42926							0.09543545936958253
VSQVLQLL	8	Unmodified	_VSQVLQLL_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	450.28166	898.548768	-1.238	-0.00055744	-3.5021	-0.0015769	-4.7401	-0.0021344	450.27975145368396	107.06	1.3051	107.2	106.55	107.86	0.13866	-0.047308	-0.00011336	NaN	37.159	47	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	332000			64541	4049	42908	42926							0.09543545936958253
VSQVLQLL	8	Unmodified	_VSQVLQLL_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	450.28166	898.548768	-1.7762	-0.00079979	-0.4962	-0.00022343	-2.2724	-0.0010232	450.28138077557486	107.24	0.55858	107.27	106.98	107.54	0.036125	0.024596	0.0025937	NaN	37.159	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	420410			64542	4049	42908	42926							0.09543545936958253
VSQVLQLL	8	Unmodified	_VSQVLQLL_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	450.28166	898.548768	1.1977	0.00053928	-2.9416	-0.0013246	-1.744	-0.00078528	450.2805849396704	107.16	0.80276	107.26	106.89	107.69	0.10396	0.012195	0.0003914	NaN	37.159	55	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	436620			64543	4049	42908	42926							0.09543545936958253
VSQVLQLL	8	Unmodified	_VSQVLQLL_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	450.28166	898.548768	4.5723	0.0020588	-5.3049	-0.0023887	-0.73254	-0.00032985	450.2791435488106	107.05	0.83773	107.2	106.9	107.73	0.14929	-0.044926	-0.0017368	NaN	37.159	43	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	317920			64544	4049	42908	42926							0.09543545936958253
VSRATRPL	8	Unmodified	_VSRATRPL_					0	0	0			REV__ENST00000518883.6_1_8:38244092-38245477:+|nuORF	REV__ENST00000518883.6_1_8:38244092-38245477:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2741394042969	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.66	1	112.64	112.14	113.14	-0.025414								0	0	0	0.30045	1	12453	12453		40.573	5.3719	1		+		64545	28068	42909	42927	73217	73217					0.08152313228504227
VSRDRKVKGKL	11	Unmodified	_VSRDRKVKGKL_					0	0	0			REV__nc|ENSG00000186174|Q86UU0-3|BCL9L	REV__nc|ENSG00000186174|Q86UU0-3|BCL9L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.4063720703125	2	643.406778	1284.799	-1.1464	-0.00073758	1.3668	0.00087939	0.22041	0.00014181	643.4076175151858	107.74	0.83601	107.77	107.1	107.93	0.036125					77	20	5	0	0	0	0.69995	1	11457	11457		31.53	1.2121	1	3329000	+		64546	22828	42910	42928	73218	73218					0.16799523262420735
VSRGASRTRG	10	Unmodified	_VSRGASRTRG_					0	0	0		ENST00000526977.5_1_8:145649272-145649818:-|nuORF	ENST00000526977.5_1_8:145649272-145649818:-|nuORF	ENST00000526977.5_1_8:145649272-145649818:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.7944946289062	2	523.794321	1045.57409	1.0577	0.00055402	-1.9871	-0.0010409	-0.92943	-0.00048683	523.7931679624304	18.856	0.42497	18.93	18.75	19.175	0.073463					28	12	3	0	0	0	0.8486	1	348	348		18.262	1.7889	1	93038			64547	13273	42911	42929	73219	73219					0.05312413512092462
VSRGRRGL	8	Unmodified	_VSRGRRGL_					0	0	0			REV__ENST00000577379.5_1_17:79980635-79980701:-|nuORF	REV__ENST00000577379.5_1_17:79980635-79980701:-|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2731018066406	2	450.777942	899.541332	-1.0693	-0.00048204	-2.6643	-0.001201	-3.7336	-0.001683	450.77678845496365	95.582	1.7598	95.582	95.138	96.898	0					71	40	3	0	0	0	0.4196	1	9632	9632		23.042	0	1	248470	+		64548	29005	42912	42930	73220	73220					0.08754251179902894
VSRIITWTT	9	Unmodified	_VSRIITWTT_					0	0	0		nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;ENSG00000074054|ENST00000696935|CLASP1	nc|ENSG00000074054|Q7Z460-2|CLASP1	nc|ENSG00000074054|Q7Z460-2|CLASP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.3080444335938	2	538.808574	1075.60259	0.058912	3.1742E-05	-3.5667	-0.0019218	-3.5078	-0.00189	538.806607108325	90.57	3.5579	90.787	89.308	92.866	0.21737					211	84	4	0	0	0	0.74721	1	9133	9133		37.159	5.6293	1	874780			64549	1304	42913	42931	73221	73221					0.06781718368642942
VSRKPRDLKT	10	Unmodified	_VSRKPRDLKT_					0	0	0		nc|ENSG00000165115|Q86VH2-3|KIF27;nc|ENSG00000165115|Q86VH2-2|KIF27;ENSG00000165115|ENST00000297814|KIF27	nc|ENSG00000165115|Q86VH2-3|KIF27	nc|ENSG00000165115|Q86VH2-3|KIF27	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	400.91473388671875	3	400.578811	1198.7146	-0.18596	-7.4493E-05	4.3127	0.0017276	4.1267	0.0016531	400.58045429984315	118.58	0.28901	118.5	118.43	118.71	-0.07531					12	9	2	0	0	0	0.86151	1	12728	12728		15.333	0.63944	1	294660			64550	6048	42914	42932	73222	73222					0.12319572445630911
VSRPRLLLNTP	11	Unmodified	_VSRPRLLLNTP_					0	0	0			REV__ENST00000469541.5_1_X:78616557-78616662:-|nuORF	REV__ENST00000469541.5_1_X:78616557-78616662:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	633.3858032226562	2	633.388054	1264.76155	-0.047261	-2.9934E-05	-4.1965	-0.002658	-4.2437	-0.0026879	633.3851991491786	51.452	1.7221	51.45	50.349	52.071	-0.0020447					76	46	2	0	0	0	0.71921	1	4397	4397		38.754	1.2454	1	76796	+		64551	27195	42915	42933	73223	73223					0.13976431996798055
VSRRPIRSY	9	Unmodified	_VSRRPIRSY_					0	0	0			REV__ENST00000342963.2_1_7:5459527-5460374:+|nuORF	REV__ENST00000342963.2_1_7:5459527-5460374:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.8314819335938	2	567.330539	1132.64652	-1.3958	-0.00079187	0.45547	0.0002584	-0.94031	-0.00053347	567.3306768153905	113.32	5.91	113.27	113.24	119.15	-0.044777					245	138	3	0	0	0	0.7932	1	12324	12324		24.519	0.99649	1	1691900	+		64552	25281	42916	42934	73224	73224					0.08550747585650242
VSRSPKTVRPK	11	Unmodified	_VSRSPKTVRPK_					0	0	0			REV__ENSG00000158480|ENST00000289431|SPATA2	REV__ENSG00000158480|ENST00000289431|SPATA2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	627.8838500976562	2	627.885678	1253.7568	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.77	1	112.7	112.2	113.2	-0.063889								0	0	0	0.56276	1	12243	12243		16.717	0.24424	1		+		64553	20609	42917	42935	73225	73225					0.1400754785402114
VSRSSLGPK	9	Unmodified	_VSRSSLGPK_					0	0	0			REV__ENSG00000101745|ENST00000262126|ANKRD12	REV__ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7716979980469	2	465.771991	929.529429	0.14869	6.9257E-05	-0.33497	-0.00015602	-0.18628	-8.6764E-05	465.77176518409055	22.695	1.1216	22.084	21.633	22.755	-0.6107					64	27	4	0	0	0	0.086373	1	938	938		95.815	5.4453	1	2567600	+		64554	17298	42918	42936	73226	73226					0.06184589646045424
VSRVFKFI	8	Unmodified	_VSRVFKFI_					0	0	0		ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR	ENSG00000001626|ENST00000003084|CFTR	ENSG00000001626|ENST00000003084|CFTR	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.3058776855469	2	498.30547	994.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.778	1	52.754	52.254	53.254	-0.023849								0	0	0	0.3037	1	4683	4683		18.324	0	1				64555	650	42919	42937	73227	73227					0.0988724492780193
VSRVMPPSH	9	Unmodified	_VSRVMPPSH_					0	0	0			REV__nc|ENSG00000141127|O60256-4|PRPSAP2	REV__nc|ENSG00000141127|O60256-4|PRPSAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.2660217285156	2	505.266019	1008.51748	0.37146	0.00018769	-3.968	-0.0020049	-3.5966	-0.0018172	505.2638876254135	17.537	0.66119	17.055	16.851	17.512	-0.48256					34	14	4	0	0	0	0.30689	1	279	279		64.207	9.431	1	1133500	+		64556	19663	42920	42938	73228	73228					0.013566496312023446
VSSACRFA	8	Unmodified	_VSSACRFA_					0	0	0			REV__ENSG00000198551|ENST00000361113|ZNF627	REV__ENSG00000198551|ENST00000361113|ZNF627	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.7806701660156	2	420.705263	839.395972	-1.9396	-0.00081599	-1.9024	-0.00080036	-3.842	-0.0016164	420.70440486455357	36.069	0.70295	36.069	35.722	36.425	0					26	17	2	0	0	0	0.4196	1	2048	2048		47.916	35.709	1	62282	+		64557	23337	42921	42939	73229	73229					-0.030149727313187213
VSSACRFA	8	Unmodified	_VSSACRFA_					0	0	0			REV__ENSG00000198551|ENST00000361113|ZNF627	REV__ENSG00000198551|ENST00000361113|ZNF627	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.7035217285156	2	420.705263	839.395972	-0.84556	-0.00035573	-2.7777	-0.0011686	-3.6233	-0.0015243	420.7040371594046	36.096	0.77119	36.04	35.742	36.513	-0.055904					28	16	2	0	0	0	0.84634	1	2377	2377		60.294	4.7898	1	183950	+		64558	23337	42921	42939	73230	73230					-0.030149727313187213
VSSACRFA	8	Unmodified	_VSSACRFA_					0	0	0			REV__ENSG00000198551|ENST00000361113|ZNF627	REV__ENSG00000198551|ENST00000361113|ZNF627	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	420.705263	839.395972	-0.031702	-1.3337E-05	-3.7817	-0.001591	-3.8134	-0.0016043	420.7036782771799	36.015	0.63437	35.955	35.564	36.198	-0.060333	0.01154	-0.00029346	NaN	47.916	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	94782	+		64559	23337	42921	42939							-0.030149727313187213
VSSACRFA	8	Unmodified	_VSSACRFA_					0	0	0			REV__ENSG00000198551|ENST00000361113|ZNF627	REV__ENSG00000198551|ENST00000361113|ZNF627	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	420.705263	839.395972	0.98906	0.0004161	-3.9074	-0.0016439	-2.9183	-0.0012278	420.70359515655906	35.443	0.34092	35.69	35.515	35.856	0.2477	-0.25275	-0.0003992	NaN	47.916	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119600	+		64560	23337	42921	42939							-0.030149727313187213
VSSACRFA	8	Unmodified	_VSSACRFA_					0	0	0			REV__ENSG00000198551|ENST00000361113|ZNF627	REV__ENSG00000198551|ENST00000361113|ZNF627	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	420.705263	839.395972	1.4872	0.00062566	-4.1138	-0.0017307	-2.6266	-0.001105	420.70342939515444	35.413	0.45583	35.795	35.597	36.053	0.3812	-0.14854	-0.00057289	NaN	47.916	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	126930	+		64561	23337	42921	42939							-0.030149727313187213
VSSDLVPL	8	Unmodified	_VSSDLVPL_					0	0	0		ENST00000487632.5_1_3:50386199-50386910:-|nuORF	ENST00000487632.5_1_3:50386199-50386910:-|nuORF	ENST00000487632.5_1_3:50386199-50386910:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	416.227783203125	2	415.236919	828.459284	-1.8989	-0.00078847	2.5227	0.0010475	0.62385	0.00025904	415.23788168946953	39.396	1.0093	39.407	38.947	39.956	0.010704					43	26	3	0	0	0	0.4196	1	2353	2353		20.482	1.1219	1	88411			64562	12604	42922	42940	73231	73231					0.03819291257570967
VSSDLVPL	8	Unmodified	_VSSDLVPL_					0	0	0		ENST00000487632.5_1_3:50386199-50386910:-|nuORF	ENST00000487632.5_1_3:50386199-50386910:-|nuORF	ENST00000487632.5_1_3:50386199-50386910:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	415.236919	828.459284	0.17936	7.4475E-05	0.031043	1.289E-05	0.2104	8.7365E-05	415.23689481857804	39.336	0.80359	39.425	38.918	39.722	0.088371	0.022517	-0.001127	NaN	20.482	33	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85557			64563	12604	42922	42940							0.03819291257570967
VSSDLVPL	8	Unmodified	_VSSDLVPL_					0	0	0		ENST00000487632.5_1_3:50386199-50386910:-|nuORF	ENST00000487632.5_1_3:50386199-50386910:-|nuORF	ENST00000487632.5_1_3:50386199-50386910:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	415.236919	828.459284	-0.17791	-7.3876E-05	0.82037	0.00034065	0.64246	0.00026677	415.23723155723803	39.428	0.73076	39.375	39.039	39.77	-0.052727	-0.027257	-0.00047148	NaN	20.482	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79564			64564	12604	42922	42940							0.03819291257570967
VSSEEYPI	8	Unmodified	_VSSEEYPI_					0	0	0			REV__nc|ENSG00000169087|Q96EW2-3|HSPBAP1	REV__nc|ENSG00000169087|Q96EW2-3|HSPBAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	462.22216796875	2	462.221465	922.428378	-1.6716	-0.00077267	3.2868	0.0015192	1.6151	0.00074655	462.22289299060606	37.532	0.88529	37.543	37.195	38.08	0.011173					30	19	2	0	0	0	0.90465	1	2523	2523		40.573	5.3719	1	89899	+		64565	21548	42923	42941	73232	73232					-0.03593906847333983
VSSHQRKSPVK	11	Unmodified	_VSSHQRKSPVK_					0	0	0			REV__ENSG00000213928|ENST00000396864|IRF9	REV__ENSG00000213928|ENST00000396864|IRF9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.8607788085938	2	626.85966	1251.70477	0.76351	0.00047862	-1.5534	-0.00097376	-0.78988	-0.00049514	626.8586275004965	17.259	0.36571	16.776	16.579	16.944	-0.48256					14	7	3	0	0	0	0.7434	1	236	236		23.523	0.94304	1	41834	+		64566	23637	42924	42942	73233	73233					0.08898384440249174
VSSHQRKSPVK	11	Unmodified	_VSSHQRKSPVK_					0	0	0			REV__ENSG00000213928|ENST00000396864|IRF9	REV__ENSG00000213928|ENST00000396864|IRF9	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	626.85966	1251.70477	0.76351	0.00047862	-1.5534	-0.00097376	-0.78988	-0.00049514	626.8586275004965	17.259	0.36571	16.776	16.579	16.944	-0.48256	0.0080343	-0.0006321	NaN	23.523	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41834	+		64567	23637	42924	42942							0.08898384440249174
VSSHQRKSPVK	11	Unmodified	_VSSHQRKSPVK_					0	0	0			REV__ENSG00000213928|ENST00000396864|IRF9	REV__ENSG00000213928|ENST00000396864|IRF9	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	626.85966	1251.70477	1.1311	0.00070903	-0.91611	-0.00057427	0.21497	0.00013476	626.8590010464143	17.371	0.27304	16.76	16.613	16.886	-0.6107	-0.0080343	0.00016687	NaN	23.523	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35787	+		64568	23637	42924	42942							0.08898384440249174
VSSLAAKK	8	Unmodified	_VSSLAAKK_					0	0	0			REV__nc|ENSG00000118263|O75840-3|KLF7	REV__nc|ENSG00000118263|O75840-3|KLF7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	402.2524108886719	2	402.252903	802.491253	1.9978	0.00080362	-2.4856	-0.00099985	-0.48781	-0.00019622	402.2517370864552	21.102	0.51514	20.643	20.461	20.976	-0.4591					25	11	3	0	0	0	0.84341	1	746	746		24.203	4.8428	1	306690	+		64569	18300	42925	42943	73234	73234					0.0821070373136763
VSSLVKAGL	9	Unmodified	_VSSLVKAGL_					0	0	0			REV__nc|ENSG00000105976|P08581-3|MET	REV__nc|ENSG00000105976|P08581-3|MET	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.27288818359375	2	437.273835	872.533118	-2.0707	-0.00090544	3.7001	0.001618	1.6295	0.00071253	437.27525866962554	27.098	0.48258	27.098	26.739	27.222	0					26	21	2	0	0	0	0.78536	1	1040	1040		29.15	4.9468	1	39708	+		64570	17587	42926	42944	73235	73235					0.0917525941989652
VSSQLQDY	8	Unmodified	_VSSQLQDY_					0	0	0			REV__nc|ENSG00000213921|A8MZ59-1|LEUTX	REV__nc|ENSG00000213921|A8MZ59-1|LEUTX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.22442626953125	2	470.224539	938.434526	-1.7436	-0.00081987	1.9148	0.00090037	0.17119	8.05E-05	470.225297390611	39.067	0.90396	39.621	39.236	40.14	0.55449					38	20	3	0	0	0	0.23374	1	3268	3268		107.01	19.311	1	388680	+		64571	23636	42927	42945	73236	73236					-0.03715388615819393
VSSRMVST	8	Unmodified	_VSSRMVST_					0	0	0			REV__ENST00000525416.5_2_11:117198756-117198822:+|nuORF	REV__ENST00000525416.5_2_11:117198756-117198822:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.2552795410156	2	433.723652	865.432752	4.7893	0.0020772	4.3027	0.0018662	9.092	0.0039434	433.7262680663449	107.01	0.39753	107.16	106.93	107.32	0.14929					23	10	3	0	0	0	0.4196	1	13105	13105		38.806	0	1	714650	+		64572	28183	42928	42946	73237	73237					-0.005347209054093582
VSSSIFSL	8	Unmodified	_VSSSIFSL_					0	0	0			REV__nc|ENSG00000169604|Q9H6X2-4|ANTXR1	REV__nc|ENSG00000169604|Q9H6X2-4|ANTXR1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.226806640625	2	420.229094	838.443634	-1.7925	-0.00075327	-1.0357	-0.00043521	-2.8282	-0.0011885	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.89494	1	7723	7723		37.159	0	1	831720	+		64573	21589	42929	42947	73238	73238					0.017950047405179248
VSSSLLTNTY	10	Unmodified	_VSSSLLTNTY_					0	0	0			REV__nc|ENSG00000273345|Q8IVW4-2|CDKL3	REV__nc|ENSG00000273345|Q8IVW4-2|CDKL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	542.7789916992188	2	542.779679	1083.5448	-0.23421	-0.00012713	0.29518	0.00016022	0.060971	3.3094E-05	542.779695824281	34.398	0.83688	34.401	34.057	34.894	0.0026054					54	19	4	0	0	0	0.8608	1	2076	2076		34.173	0	1	451720	+		64574	16114	42930	42948	73239	73239					0.0063741165256487875
VSSSPGALI	9	Unmodified	_VSSSPGALI_					0	0	0			REV__ENST00000484400.5_1_10:129046280-129142589:+|nuORF	REV__ENST00000484400.5_1_10:129046280-129142589:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.5890808105469	2	415.734543	829.454533	1.2072	0.00050187	-0.66617	-0.00027695	0.54101	0.00022492	415.734247337822	33.559	0.54246	33.728	33.442	33.984	0.16971					15	12	2	0	0	0	0.20752	1	2434	2434		63.306	7.8021	1	110890	+		64575	27511	42931	42949	73240	73240					0.03298407114800739
VSSSSNQE	8	Unmodified	_VSSSSNQE_					0	0	0		nc|ENSG00000164938|Q96A56-2|TP53INP1;ENSG00000164938|ENST00000342697|TP53INP1	nc|ENSG00000164938|Q96A56-2|TP53INP1	nc|ENSG00000164938|Q96A56-2|TP53INP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.1846618652344	2	419.182872	836.35119	-1.7635	-0.00073924	3.0619	0.0012835	1.2983	0.00054424	419.18426250816185	99.934	0.99162	100.15	99.734	100.73	0.21511					55	22	3	0	0	0	0.87792	1	10438	10438		31.53	1.0262	1	335410			64576	6026	42932	42950	73241	73241					-0.07353125063661992
VSSSSNQE	8	Unmodified	_VSSSSNQE_					0	0	0		nc|ENSG00000164938|Q96A56-2|TP53INP1;ENSG00000164938|ENST00000342697|TP53INP1	nc|ENSG00000164938|Q96A56-2|TP53INP1	nc|ENSG00000164938|Q96A56-2|TP53INP1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	419.182872	836.35119	3.1801	0.001333	-1.1692	-0.00049012	2.0108	0.0008429	419.1823583622539	100.43	0.52921	100.48	100.21	100.73	0.046356	0.1776	-0.0015989	NaN	31.53	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47037			64577	6026	42932	42950							-0.07353125063661992
VSSSVAYS	8	Unmodified	_VSSSVAYS_					0	0	0			REV__nc|ENSG00000100239|O75170-6|PPP6R2	REV__nc|ENSG00000100239|O75170-6|PPP6R2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.1960144042969	2	400.195251	798.375948	0.56967	0.00022798	-0.43419	-0.00017376	0.13548	5.422E-05	400.1953507719879	82.54	1.3237	82.686	82.288	83.611	0.1455					67	30	3	0	0	0	0.91005	1	8042	8042		42.474	5.446	1	6052300	+		64578	17156	42933	42951	73242	73242					-0.03130445190288356
VSSTSKKLG	9	Unmodified	_VSSTSKKLG_					0	0	0		nc|ENSG00000168014|Q4AC94-2|C2CD3;nc|ENSG00000168014|Q4AC94-4|C2CD3;nc|ENSG00000168014|Q4AC94-1|C2CD3;nc|ENSG00000168014|Q4AC94-3|C2CD3;ENSG00000168014|ENST00000334126|C2CD3;ENST00000415191.6_1_11:73824618-73881837:-|nuORF	nc|ENSG00000168014|Q4AC94-2|C2CD3	nc|ENSG00000168014|Q4AC94-2|C2CD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7662353515625	2	453.766374	905.518196	-1.6067	-0.00072906	-0.612	-0.00027771	-2.2187	-0.0010068	453.76606039248026	41.272	1.9725	41.906	41.675	43.648	0.6339					112	50	4	0	0	0	0.38563	4	3627	3627;3663;3676;3688		58.782	14.241	1	8512600			64579	6356	42934	42952	73243;73244;73245;73246	73243					0.061657675519199984
VSTLLKEI	8	Unmodified	_VSTLLKEI_					0	0	0		ENSG00000204311|ENST00000644580|PJVK	ENSG00000204311|ENST00000644580|PJVK	ENSG00000204311|ENST00000644580|PJVK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.7799987792969	2	451.781493	901.548434	-1.1974	-0.00054094	-1.7737	-0.00080132	-2.971	-0.0013423	451.7806721299916	86.886	1.0382	86.886	86.517	87.555	0					40	23	2	0	0	0	0.89043	1	8297	8297		35.618	3.6634	1	157750			64580	8432	42935	42953	73247	73247					0.09372126217078858
VSTLTNIH	8	Unmodified	_VSTLTNIH_					0	0	0		nc|ENSG00000275410|P35680-4|HNF1B;nc|ENSG00000275410|P35680-2|HNF1B;ENSG00000275410|ENST00000617811|HNF1B	nc|ENSG00000275410|P35680-4|HNF1B	nc|ENSG00000275410|P35680-4|HNF1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7445373535156	2	442.745442	883.476331	0.39735	0.00017592	-1.8334	-0.00081175	-1.4361	-0.00063583	442.74450802650625	89.278	0.7365	89.729	89.448	90.184	0.45058					60	17	4	0	0	0	0.9295	1	10580	10580		55.504	2.1528	1	3535200			64581	9003	42936	42954	73248	73248					0.029932118633610116
VSTLTNIH	8	Unmodified	_VSTLTNIH_					0	0	0		nc|ENSG00000275410|P35680-4|HNF1B;nc|ENSG00000275410|P35680-2|HNF1B;ENSG00000275410|ENST00000617811|HNF1B	nc|ENSG00000275410|P35680-4|HNF1B	nc|ENSG00000275410|P35680-4|HNF1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.7442932128906	2	442.745442	883.476331	0.70525	0.00031225	-2.1241	-0.00094045	-1.4189	-0.0006282	442.7443686579111	91.271	2.0811	91.72	90.611	92.692	0.44958					87	49	3	0	0	0	0.87792	1	10773	10773		31.53	0	1	3166400			64582	9003	42936	42954	73249	73249					0.029932118633610116
VSTRIPFLV	9	Unmodified	_VSTRIPFLV_					0	0	0			REV__ENSG00000139209|ENST00000266579|SLC38A4	REV__ENSG00000139209|ENST00000266579|SLC38A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3184204101562	2	516.316035	1030.61752	1.0503	0.0005423	-4.116	-0.0021252	-3.0657	-0.0015829	516.3139077624099	19.279	0.18587	19.352	19.268	19.454	0.073465					7	5	2	0	0	0	0.78983	1	388	388		27.882	1.0861	1	26366	+		64583	19524	42937	42955	73250	73250					0.10343210236624145
VSTTIIVV	8	Unmodified	_VSTTIIVV_					0	0	0		nc|ENSG00000066230|P48764-2|SLC9A3;ENSG00000066230|ENST00000264938|SLC9A3	nc|ENSG00000066230|P48764-2|SLC9A3	nc|ENSG00000066230|P48764-2|SLC9A3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	416.22833251953125	2	416.262936	830.51132	0.18635	7.757E-05	-0.49924	-0.00020781	-0.31289	-0.00013024	416.2644445508775	40.039	0.15685	40.12	40.004	40.161	0.081345					5	3	2	0	0	0	0.4196	1	2506	2506		26.796	8.4717	1	20570			64584	1153	42938	42956	73251	73251					0.08928454671331565
VSVGKQVVVF	10	Unmodified	_VSVGKQVVVF_					0	0	0			REV__ENST00000395246.5_1_5:130694918-130695191:+|nuORF	REV__ENST00000395246.5_1_5:130694918-130695191:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.3186645507812	2	531.321317	1060.62808	-0.033063	-1.7567E-05	-3.6466	-0.0019375	-3.6797	-0.0019551	531.3191547732448	95.172	2.5483	95.24	94.714	97.262	0.068336					181	59	5	0	0	0	0.8545	1	10105	10105		36.447	3.6343	1	3878900	+		64585	26102	42939	42957	73252	73252					0.10019192891104467
VSVGMCQGG	9	Unmodified	_VSVGMCQGG_					0	0	0		ENST00000589114.5_1_18:34289358-34289451:+|nuORF	ENST00000589114.5_1_18:34289358-34289451:+|nuORF	ENST00000589114.5_1_18:34289358-34289451:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.18365478515625	2	419.183306	836.352059	1.7002	0.00071268	-1.6851	-0.00070637	0.015057	6.3116E-06	419.18283597364456	92.161	2.0295	92.608	91.837	93.866	0.44661					131	47	5	0	0	0	0.78536	1	10961	10961		29.15	3.6994	1	2677100			64586	14226	42940	42958	73253	73253					-0.07266325219950431
VSVIISIPV	9	Unmodified	_VSVIISIPV_					0	0	0			REV__ENSG00000181004|ENST00000314218|BBS12	REV__ENSG00000181004|ENST00000314218|BBS12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.79937744140625	2	463.799686	925.584819	-2.5644	-0.0011894	3.5074	0.0016267	0.94293	0.00043733	463.80118382898894	40.741	0.9326	41.133	40.832	41.765	0.39209					70	26	3	0	0	0	0.7932	1	3562	3562		17.365	0.89182	1	5806600	+		64587	22434	42941	42959	73254	73254					0.11905003113815837
VSVKKKHLL	9	Unmodified	_VSVKKKHLL_					0	0	0		ENSG00000131951|ENST00000570145|LRRC9;nc|ENSG00000131951|Q6ZRR7-2|LRRC9;nc|ENSG00000131951|Q6ZRR7|LRRC9	ENSG00000131951|ENST00000570145|LRRC9	ENSG00000131951|ENST00000570145|LRRC9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7821044921875	2	526.352951	1050.69135	-0.38473	-0.0002025	0.88416	0.00046538	0.49944	0.00026288	526.3537921428742	47.375	0.31571	47.846	47.693	48.009	0.47139					11	7	2	0	0	0	0.20789	1	4523	4523		17.365	13.681	1	150220			64588	3756	42942	42960	73255	73255					0.168031783989818
VSVKQYLTII	10	Unmodified	_VSVKQYLTII_					0	0	0			REV__ENSG00000167165|ENST00000305139|UGT1A6	REV__ENSG00000167165|ENST00000305139|UGT1A6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3533325195312	2	582.355357	1162.69616	-1.3468	-0.00078431	-1.4639	-0.00085248	-2.8106	-0.0016368	582.3544118745583	107.09	1.166	107.12	106.59	107.75	0.036118					85	27	4	0	0	0	0.85466	1	11388	11388		20.947	0.95016	1	1230900	+		64589	21361	42943	42961	73256	73256					0.12132017751082458
VSVLIPLL	8	Unmodified	_VSVLIPLL_					0	0	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	427.30279541015625	2	427.291497	852.568441	-0.75467	-0.00032246	-0.94352	-0.00040316	-1.6982	-0.00072562	427.2911538033649	68.841	0.50053	68.804	68.625	69.126	-0.036957					23	18	2	0	0	0	0.4196	1	6652	6652		4.3163	0	1	105170			64590	2636	42944	42962	73257	73257					0.13625921947721054
VSVNRAGP	8	Unmodified	_VSVNRAGP_					0	0	0			REV__ENSG00000171360|ENST00000246646|KRT38	REV__ENSG00000171360|ENST00000246646|KRT38	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.2260437011719	2	400.224677	798.434801	-0.073338	-2.9352E-05	4.3831	0.0017542	4.3097	0.0017249	400.22636614843225	35.501	1.6335	35.44	35.254	36.887	-0.060337					96	46	3	0	0	0	0.89962	1	1903	1903		38.806	1.647	1	419330	+	+	64591	15970	42945	42963	73258	73258					0.027520758947048307
VSVNWPNAH	9	Unmodified	_VSVNWPNAH_					0	0	0		ENST00000469173.1_1_1:174976108-174977843:+|nuORF	ENST00000469173.1_1_1:174976108-174977843:+|nuORF	ENST00000469173.1_1_1:174976108-174977843:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	512.2533569335938	2	512.253966	1022.49338	-0.38169	-0.00019552	0.044351	2.2719E-05	-0.33734	-0.0001728	512.2538769688313	54.312	1.3388	54.263	53.816	55.154	-0.049274					65	39	2	0	0	0	0.67345	1	4514	4514		42.396	1.1878	1	691410			64592	12193	42946	42964	73259	73259					-0.01696867530813506
VSVPLSLVL	9	Unmodified	_VSVPLSLVL_					0	0	0		ENST00000296315.7_1_3:56763140-56763290:-|nuORF	ENST00000296315.7_1_3:56763140-56763290:-|nuORF	ENST00000296315.7_1_3:56763140-56763290:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.800537109375	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	3054	3054		12.207	0.69583	1	1231300			64593	9732	42947	42965	73260	73260					0.11905003113804469
VSVRLGRVAAM	11	Unmodified	_VSVRLGRVAAM_					0	0	0			REV__ENSG00000074356|ENST00000389005|NCBP3	REV__ENSG00000074356|ENST00000389005|NCBP3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	579.8443603515625	2	579.842425	1157.6703	-1.355	-0.00078567	4.169	0.0024174	2.814	0.0016317	579.8447437223629	102.17	1.0869	102.31	101.93	103.02	0.13569					79	26	4	0	0	0	0.7434	1	10708	10708		23.523	3.5259	1	2038000	+		64594	16689	42948	42966	73261	73261					0.09776845027818126
VSVRPYVPP	9	Unmodified	_VSVRPYVPP_					0	0	0			REV__ENST00000351266.8_1_9:34551676-34551760:-|nuORF	REV__ENST00000351266.8_1_9:34551676-34551760:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.22760009765625	2	507.292559	1012.57057	0.31805	0.00016134	-3.6795	-0.0018666	-3.3615	-0.0017053	507.2904066137781	29.985	0.49415	30.01	29.762	30.256	0.025013					16	11	2	0	0	0	0.20789	1	1496	1496		24.203	0	1	39293	+		64595	25341	42949	42967	73262	73262					0.06478350685506484
VSVTASAAAKR	11	Unmodified	_VSVTASAAAKR_					0	0	0			REV__ENSG00000124215|ENST00000348616|CDH26	REV__ENSG00000124215|ENST00000348616|CDH26	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.8101196289062	2	530.809105	1059.60366	1.919	0.0010186	3.5246	0.0018709	5.4435	0.0028895	530.8092001322652	97.33	1.4397	97.715	96.74	98.18	0.38548					101	34	4	0	0	0	0.58425	1	11702	11702		45.972	1.8554	1	571600	+		64596	18572	42950	42968	73263	73263					0.07623932737533323
VSVTKYEL	8	Unmodified	_VSVTKYEL_					0	0	0			REV__ENSG00000234127|ENST00000454678|TRIM26	REV__ENSG00000234127|ENST00000454678|TRIM26	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	469.7618408203125	2	469.7633	937.512048	-1.0651	-0.00050035	-2.9191	-0.0013713	-3.9842	-0.0018716	469.76173272681865	35.57	1.9038	35.601	35.255	37.159	0.031132					87	53	2	0	0	0	0.84341	1	1928	1928		24.203	2.2429	1	219920	+		64597	23776	42951	42969	73264	73264					0.0407924932038668
VSVTSKGVV	9	Unmodified	_VSVTSKGVV_					0	0	0		ENSG00000075914|ENST00000265564|EXOSC7;ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENSG00000075914|ENST00000265564|EXOSC7	ENSG00000075914|ENST00000265564|EXOSC7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	438.2629089355469	2	438.263468	874.512382	-0.1284	-5.6275E-05	-1.4382	-0.00063032	-1.5666	-0.00068659	438.2629298773743	40.324	5.0694	40.277	39.89	44.959	-0.04789					364	145	5	0	0	0	0.7932	1	3012	3012		20.947	0.95016	1	21381000			64598	1347	42952	42970	73265	73265					0.07010669040244011
VSVVIYKKFQI	11	Unmodified	_VSVVIYKKFQI_					0	0	0		ENSG00000139209|ENST00000266579|SLC38A4	ENSG00000139209|ENST00000266579|SLC38A4	ENSG00000139209|ENST00000266579|SLC38A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.27362060546875	3	441.939346	1322.79621	-0.13164	-5.8177E-05	1.2447	0.00055007	1.113	0.0004919	441.93974761618824	56.948	1.0225	56.935	56.674	57.696	-0.012203					78	36	3	0	0	0	0.74771	1	5116	5116		22.562	0	1	317980			64599	4355	42953	42971	73266	73266					0.1477225508488118
VSVVLFLVSRF	11	Unmodified	_VSVVLFLVSRF_					0	0	0		ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;nc|ENSG00000155511|P42261-4|GRIA1;nc|ENSG00000155511|P42261-2|GRIA1;ENSG00000155511|ENST00000285900|GRIA1;nc|ENSG00000155511|P42261-6|GRIA1;nc|ENSG00000155511|P42261-5|GRIA1;ENST00000481559.6_1_5:152869375-153085697:+|nuORF;nc|ENSG00000155511|P42261-3|GRIA1;nc|ENSG00000125675|P42263|GRIA3;ENSG00000125675|ENST00000620443|GRIA3	ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000120251|P42262-4|GRIA2;nc|ENSG00000155511|P42261-4|GRIA1;nc|ENSG00000125675|P42263|GRIA3	ENSG00000152578|ENST00000282499|GRIA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	422.591796875	3	422.592058	1264.75434	-1.8082	-0.00076411	2.8308	0.0011963	1.0226	0.00043216	422.5931690145651	56.763	1.1935	56.835	56.503	57.696	0.071835					118	57	3	0	0	0	0.74022	1	4787	4787		24.232	0.85391	1	582700			64600	5184;14873;5326;3404	42954	42972	73267	73267					0.13255699396358978
VSWEYLLY	8	Unmodified	_VSWEYLLY_					0	0	0		ENST00000454117.1_1_1:23697918-23697966:+|nuORF	ENST00000454117.1_1_1:23697918-23697966:+|nuORF	ENST00000454117.1_1_1:23697918-23697966:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	536.2416381835938	2	536.771126	1071.5277	-0.60916	-0.00032698	-2.3893	-0.0012825	-2.9985	-0.0016095	536.7697306251608	53.267	0.37254	53.881	53.655	54.028	0.61436					14	8	2	0	0	0	0.4196	1	5407	5407		35.201	0	1	295000			64601	11938	42955	42973	73268	73268					-0.005204641625596196
VSWLTALV	8	Unmodified	_VSWLTALV_					0	0	0			REV__nc|ENSG808|P60509|ERVPABLB-1	REV__nc|ENSG808|P60509|ERVPABLB-1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	445.635986328125	2	444.763104	887.511654	-0.94193	-0.00041894	-1.1438	-0.00050874	-2.0858	-0.00092768	444.76135730279617	38.507	1.8367	38.848	37.608	39.444	0.34187					110	45	4	0	0	0	0.4196	1	3080	3080		25.45	0	1	1109700	+		64602	30315	42956	42974	73269	73269					0.06339874391176181
VSWPRSLN	8	Unmodified	_VSWPRSLN_					0	0	0			REV__ENST00000564213.1_1_16:1396269-1397350:+|nuORF	REV__ENST00000564213.1_1_16:1396269-1397350:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.7587585449219	2	479.758884	957.503215	-1.4003	-0.00067182	1.0083	0.00048375	-0.39201	-0.00018807	479.7592856741781	46.693	0.64802	46.689	46.371	47.019	-0.0041618					26	15	2	0	0	0	0.93293	1	3793	3793		51.335	1.3109	1	159570	+		64603	28833	42957	42975	73270	73270					0.02276320474561544
VSWVSASDTV	10	Unmodified	_VSWVSASDTV_					0	0	0		nc|ENSG00000115414|P02751-12|FN1;nc|ENSG00000115414|P02751-4|FN1;nc|ENSG00000115414|P02751-10|FN1;nc|ENSG00000115414|P02751-6|FN1;nc|ENSG00000115414|P02751-5|FN1;nc|ENSG00000115414|P02751-9|FN1;nc|ENSG00000115414|P02751-14|FN1;nc|ENSG00000115414|P02751-13|FN1;nc|ENSG00000115414|P02751-8|FN1;nc|ENSG00000115414|P02751-17|FN1;nc|ENSG00000115414|P02751-3|FN1;nc|ENSG00000115414|P02751-11|FN1;nc|ENSG00000115414|P02751-1|FN1;nc|ENSG00000115414|P02751-7|FN1;ENSG00000115414|ENST00000354785|FN1	nc|ENSG00000115414|P02751-12|FN1	nc|ENSG00000115414|P02751-12|FN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.7822265625	2	525.758746	1049.50294	-0.38103	-0.00020033	-2.4149	-0.0012697	-2.796	-0.00147	525.7575597554674	47.425	0.32856	47.896	47.607	47.935	0.47139					17	7	4	0	0	0	0.37624	1	4487	4487		44.117	13.613	1	847730			64604	2840	42958	42976	73271	73271					-0.019831440359666885
VSYKNRKKVKV	11	Unmodified	_VSYKNRKKVKV_					0	0	0			REV__ENSG00000137628|ENST00000393743|DDX60	REV__ENSG00000137628|ENST00000393743|DDX60	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.61676025390625	3	450.285628	1347.83505	-1.7867	-0.00080451	-3.7038	-0.0016678	-5.4905	-0.0024723	450.2837313529022	46.491	0.75829	46.491	46.198	46.956	0					36	18	3	0	0	0	0.79224	1	3510	3510		12.957	0.52465	1	112660	+		64605	19395	42959	42977	73272	73272					0.17504980439230167
VSYKNRKKVKV	11	Unmodified	_VSYKNRKKVKV_					0	0	0			REV__ENSG00000137628|ENST00000393743|DDX60	REV__ENSG00000137628|ENST00000393743|DDX60	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	450.285628	1347.83505	-0.8638	-0.00038896	-4.4229	-0.0019916	-5.2867	-0.0023805	450.6184796103605	46.765	0.71177	46.736	46.182	46.894	-0.028778	0.18884	0.00044742	NaN	12.957	21	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76725	+		64606	19395	42959	42977							0.17504980439230167
VSYKNRKKVKV	11	Unmodified	_VSYKNRKKVKV_					0	0	0			REV__ENSG00000137628|ENST00000393743|DDX60	REV__ENSG00000137628|ENST00000393743|DDX60	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	450.285628	1347.83505	0.3735	0.00016818	-6.1309	-0.0027606	-5.7574	-0.0025925	450.61733312099676	46.552	0.43845	46.548	46.327	46.766	-0.0041618	0.00065109	-0.0018598	NaN	12.957	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49191	+		64607	19395	42959	42977							0.17504980439230167
VSYKNRKKVKV	11	Unmodified	_VSYKNRKKVKV_					0	0	0			REV__ENSG00000137628|ENST00000393743|DDX60	REV__ENSG00000137628|ENST00000393743|DDX60	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	450.285628	1347.83505	0.26369	0.00011873	-5.4258	-0.0024432	-5.1621	-0.0023244	450.28310161205195	46.471	0.75757	46.509	46.121	46.878	0.038181	-0.038879	-0.00090733	NaN	12.957	30	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100400	+		64608	19395	42959	42977							0.17504980439230167
VSYKNRKKVKV	11	Unmodified	_VSYKNRKKVKV_					0	0	0			REV__ENSG00000137628|ENST00000393743|DDX60	REV__ENSG00000137628|ENST00000393743|DDX60	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	450.285628	1347.83505	-0.29915	-0.00013471	-4.6893	-0.0021115	-4.9885	-0.0022462	450.2833460679514	46.532	0.67675	46.453	46.043	46.72	-0.079006	-0.094396	8.7533E-05	NaN	12.957	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80620	+		64609	19395	42959	42977							0.17504980439230167
VSYTGLDEK	9	Unmodified	_VSYTGLDEK_					0	0	0			REV__ENSG00000036448|ENST00000262113|MYOM2	REV__ENSG00000036448|ENST00000262113|MYOM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.2530212402344	2	506.253297	1010.49204	-1.6382	-0.00082933	1.5306	0.00077487	-0.10758	-5.4464E-05	506.25395587471024	37.705	1.0151	37.705	37.395	38.41	0					69	24	5	0	0	0	0.69624	1	2279	2279		40.778	5.1599	1	1276600	+		64610	16292	42960	42978	73273	73273					-0.012785464102307742
VSYTVILVTV	10	Unmodified	_VSYTVILVTV_					0	0	0		ENSG00000169488|ENST00000305051|OR4K15	ENSG00000169488|ENST00000305051|OR4K15	ENSG00000169488|ENST00000305051|OR4K15	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3334350585938	2	547.328808	1092.64306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.35	1	118.25	117.75	118.75	-0.10152								0	0	0	0.45132	1	14094	14094		16.473	3.514	1				64611	6497	42961	42979	73274	73274					0.10044639968418778
VTAALLLGLM	10	Unmodified	_VTAALLLGLM_					0	0	0		ENSG00000134020|ENST00000256404|PEBP4	ENSG00000134020|ENST00000256404|PEBP4	ENSG00000134020|ENST00000256404|PEBP4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.79388427734375	2	501.306821	1000.59909	0.40416	0.00020261	3.3997	0.0017043	3.8039	0.0019069	501.308325450111	18.882	0.4722	18.253	18.06	18.533	-0.62961					23	10	3	0	0	0	0.37624	1	435	435		21.96	0	1	291230			64612	3906	42962	42980	73275	73275					0.09881332270447274
VTADLEALL	9	Unmodified	_VTADLEALL_					0	0	0		ENST00000299980.8_2_16:71766487-71766874:-|nuORF	ENST00000299980.8_2_16:71766487-71766874:-|nuORF	ENST00000299980.8_2_16:71766487-71766874:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.7671813964844	2	472.768583	943.522613	-0.80977	-0.00038283	-2.02	-0.000955	-2.8298	-0.0013378	472.76766071057733	83.885	4.2849	84.341	82.694	86.979	0.45555					211	104	4	0	0	0	0.7932	1	9764	9764		24.203	1.1603	1	567070			64613	9787	42963	42981	73276	73276					0.04859231974819522
VTAIEIVP	8	Unmodified	_VTAIEIVP_					0	0	0		ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	ENSG00000180720|ENST00000682254|CHRM4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	421.25408935546875	2	421.255111	840.49567	-1.2322	-0.00051907	-1.5244	-0.00064217	-2.7566	-0.0011612	421.25432904467385	84.477	1.3086	84.477	83.963	85.271	0					69	29	3	0	0	0	0.82419	1	8005	8005		13.775	0	1	450410			64614	7340	42964	42982	73277	73277					0.06904168154289891
VTALDNERF	9	Unmodified	_VTALDNERF_					0	0	0		ENSG00000177728|ENST00000314256|TMEM94;nc|ENSG00000177728|Q12767-3|TMEM94;nc|ENSG00000177728|Q12767-2|TMEM94;ENST00000585105.5_1_17:73482215-73489290:+|nuORF;ENST00000581085.5_1_17:73467944-73489290:+|nuORF	ENSG00000177728|ENST00000314256|TMEM94	ENSG00000177728|ENST00000314256|TMEM94	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	532.77197265625	2	532.772188	1063.52982	0.15842	8.4404E-05	-0.39675	-0.00021138	-0.23833	-0.00012697	532.7718076701411	48.549	0.69714	48.544	48.171	48.869	-0.0056381					30	15	3	0	0	0	0.086373	1	4019	4019		95.815	10.9	1	241860			64615	7161	42965	42983	73278	73278					0.0005996457523451681
VTALTVTSLR	10	Unmodified	_VTALTVTSLR_					0	0	0			REV__nc|ENSG859|P60507|ERVFC1	REV__nc|ENSG859|P60507|ERVFC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.8208618164062	2	530.821681	1059.62881	-0.034444	-1.8284E-05	-1.2984	-0.00068923	-1.3329	-0.00070751	530.8208487478996	82.524	1.2472	82.59	82.132	83.379	0.065918					77	28	4	0	0	0	0.8651	1	8144	8144		25.574	0.12388	1	1479900	+		64616	30320	42966	42984	73279	73279					0.10137987540133508
VTALYGLVVP	10	Unmodified	_VTALYGLVVP_					0	0	0		nc|ENSG00000136404|Q9BZW5-2|TM6SF1;ENSG00000136404|ENST00000322019|TM6SF1	nc|ENSG00000136404|Q9BZW5-2|TM6SF1	nc|ENSG00000136404|Q9BZW5-2|TM6SF1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3214111328125	2	516.310418	1030.60628	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.07	1	116.07	115.57	116.57	-0.0021133								0	0	0	0.45132	1	13947	13947		19.36	1.995	1				64617	4110	42967	42985	73280	73280					0.0922038814253483
VTAPDPVC	8	Unmodified	_VTAPDPVC_					0	0	0		nc|ENSG00000254536|Q6QHF9-4|PAOX	nc|ENSG00000254536|Q6QHF9-4|PAOX	nc|ENSG00000254536|Q6QHF9-4|PAOX	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.196533203125	2	401.194196	800.37384	0.4408	0.00017685	-2.7952	-0.0011214	-2.3544	-0.00094458	401.19302017272105	82.347	0.92091	82.284	81.801	82.722	-0.062943					38	20	3	0	0	0	0.4196	1	8400	8400		12.207	0	1	145150			64618	15291	42968	42986	73281	73281					-0.03433197199740334
VTARAAHGG	9	Unmodified	_VTARAAHGG_					0	0	0			REV__nc|ENSG00000173898|O15020-2|SPTBN2	REV__nc|ENSG00000173898|O15020-2|SPTBN2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.22705078125	2	420.227751	838.440949	-0.18786	-7.8944E-05	0.38594	0.00016218	0.19808	8.324E-05	420.227787372262	76.758	2.3241	76.807	74.723	77.048	0.049194					148	76	3	0	0	0	0.78536	1	7389	7389		29.15	1.2673	1	279000	+		64619	21960	42969	42987	73282	73282					0.015265941262327942
VTATPGRFGG	10	Unmodified	_VTATPGRFGG_					0	0	0			REV__chr19:11447597-11447696|36|94.25|0.95|6.63|+|2|PRKCSH,None|2	REV__chr19:11447597-11447696|36|94.25|0.95|6.63|+|2|PRKCSH,None|2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.7562255859375	2	481.756341	961.498129	-1.4795	-0.00071278	1.9304	0.00093	0.4509	0.00021722	481.7570239648171	57.421	0.72549	57.421	57.132	57.857	0					69	29	3	0	0	0	0.86471	1	4962	4962		30.318	2.0634	1	340950	+		64620	15680	42970	42988	73283	73283					0.01584016611957395
VTAVASRVQA	10	Unmodified	_VTAVASRVQA_					0	0	0		nc|ENSG00000156510|Q2TB90-2|HKDC1;ENSG00000156510|ENST00000354624|HKDC1;ENST00000488706.1_1_10:71007290-71008567:+|nuORF;nc|ENSG00000156510|Q2TB90-3|HKDC1	nc|ENSG00000156510|Q2TB90-2|HKDC1;nc|ENSG00000156510|Q2TB90-3|HKDC1	nc|ENSG00000156510|Q2TB90-3|HKDC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2901611328125	2	501.290548	1000.56654	-0.9424	-0.00047241	0.84818	0.00042518	-0.094216	-4.7229E-05	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.86763	1	8691	8691		26.693	1.1189	1	6939200			64621	15016;15015	42971	42989	73284	73284					0.06628261191804086
VTAVDTKRGV	10	Unmodified	_VTAVDTKRGV_					0	0	0		nc|ENSG00000134775|Q2V2M9-2|FHOD3;nc|ENSG00000134775|Q2V2M9|FHOD3;nc|ENSG00000134775|Q2V2M9-3|FHOD3;ENSG00000134775|ENST00000590592|FHOD3;ENST00000589114.5_1_18:33877702-34289359:+|nuORF;ENST00000591635.5_1_18:34124550-34298500:+|nuORF	nc|ENSG00000134775|Q2V2M9-2|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3034057617188	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.86587	1	8694	8694		29.17	1.2878	1	9288900			64622	3958	42972	42990	73285	73285					0.07224530363305348
VTAVDTKRGV	10	Unmodified	_VTAVDTKRGV_					0	0	0		nc|ENSG00000134775|Q2V2M9-2|FHOD3;nc|ENSG00000134775|Q2V2M9|FHOD3;nc|ENSG00000134775|Q2V2M9-3|FHOD3;ENSG00000134775|ENST00000590592|FHOD3;ENST00000589114.5_1_18:33877702-34289359:+|nuORF;ENST00000591635.5_1_18:34124550-34298500:+|nuORF	nc|ENSG00000134775|Q2V2M9-2|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3031005859375	2	523.303655	1044.59276	1.1688	0.00061163	-1.3622	-0.00071286	-0.19344	-0.00010123	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.86471	1	9423	9423		30.318	2.2362	1	12580000			64623	3958	42972	42990	73286	73286					0.07224530363305348
VTAVDTKRGV	10	Unmodified	_VTAVDTKRGV_					0	0	0		nc|ENSG00000134775|Q2V2M9-2|FHOD3;nc|ENSG00000134775|Q2V2M9|FHOD3;nc|ENSG00000134775|Q2V2M9-3|FHOD3;ENSG00000134775|ENST00000590592|FHOD3;ENST00000589114.5_1_18:33877702-34289359:+|nuORF;ENST00000591635.5_1_18:34124550-34298500:+|nuORF	nc|ENSG00000134775|Q2V2M9-2|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3037109375	2	523.303655	1044.59276	0.71899	0.00037625	-0.95883	-0.00050176	-0.23984	-0.00012551	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.70553	1	9039	9039		44.377	7.9304	1	13442000			64624	3958	42972	42990	73287	73287					0.07224530363305348
VTAVDTKRGV	10	Unmodified	_VTAVDTKRGV_					0	0	0		nc|ENSG00000134775|Q2V2M9-2|FHOD3;nc|ENSG00000134775|Q2V2M9|FHOD3;nc|ENSG00000134775|Q2V2M9-3|FHOD3;ENSG00000134775|ENST00000590592|FHOD3;ENST00000589114.5_1_18:33877702-34289359:+|nuORF;ENST00000591635.5_1_18:34124550-34298500:+|nuORF	nc|ENSG00000134775|Q2V2M9-2|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3031616210938	2	523.303655	1044.59276	-1.4863	-0.0007778	1.1993	0.00062762	-0.28699	-0.00015018	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.86471	1	8560	8560		30.318	1.1477	1	3566700			64625	3958	42972	42990	73288	73288					0.07224530363305348
VTAVDTKRGV	10	Unmodified	_VTAVDTKRGV_					0	0	0		nc|ENSG00000134775|Q2V2M9-2|FHOD3;nc|ENSG00000134775|Q2V2M9|FHOD3;nc|ENSG00000134775|Q2V2M9-3|FHOD3;ENSG00000134775|ENST00000590592|FHOD3;ENST00000589114.5_1_18:33877702-34289359:+|nuORF;ENST00000591635.5_1_18:34124550-34298500:+|nuORF	nc|ENSG00000134775|Q2V2M9-2|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3045043945312	2	523.303655	1044.59276	-1.5386	-0.00080516	1.2914	0.0006758	-0.2472	-0.00012936	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.86272	2	9102	9018;9102		25.574	0.12388	1	12189000			64626	3958	42972	42990	73289;73290	73290					0.07224530363305348
VTAVDTKRGV	10	Unmodified	_VTAVDTKRGV_					0	0	0		nc|ENSG00000134775|Q2V2M9-2|FHOD3;nc|ENSG00000134775|Q2V2M9|FHOD3;nc|ENSG00000134775|Q2V2M9-3|FHOD3;ENSG00000134775|ENST00000590592|FHOD3;ENST00000589114.5_1_18:33877702-34289359:+|nuORF;ENST00000591635.5_1_18:34124550-34298500:+|nuORF	nc|ENSG00000134775|Q2V2M9-2|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3021850585938	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.8545	1	10634	10634		36.447	0.82846	1	11944000			64627	3958	42972	42990	73291	73291					0.07224530363305348
VTAVDTKRGV	10	Unmodified	_VTAVDTKRGV_					0	0	0		nc|ENSG00000134775|Q2V2M9-2|FHOD3;nc|ENSG00000134775|Q2V2M9|FHOD3;nc|ENSG00000134775|Q2V2M9-3|FHOD3;ENSG00000134775|ENST00000590592|FHOD3;ENST00000589114.5_1_18:33877702-34289359:+|nuORF;ENST00000591635.5_1_18:34124550-34298500:+|nuORF	nc|ENSG00000134775|Q2V2M9-2|FHOD3	nc|ENSG00000134775|Q2V2M9-2|FHOD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3040771484375	2	523.303655	1044.59276	-1.0824	-0.0005664	0.97934	0.00051249	-0.10301	-5.3904E-05	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.82886	1	10650	10650		37.812	7.3079	1	13160000			64628	3958	42972	42990	73292	73292					0.07224530363305348
VTAVFILLVA	10	Unmodified	_VTAVFILLVA_					0	0	0		ENSG00000141574|ENST00000269389|SECTM1	ENSG00000141574|ENST00000269389|SECTM1	ENSG00000141574|ENST00000269389|SECTM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303466796875	2	523.336436	1044.65832	1.1312	0.00059198	-2.5254	-0.0013216	-1.3942	-0.00072963	523.8386552440792	88.205	0.37083	88.256	87.945	88.316	0.050415					10	8	2	0	0	0	0.37624	1	9061	9061		27.882	0	1	37920			64629	4513	42973	42991	73293	73293					0.13777551556290746
VTAVSLVLY	9	Unmodified	_VTAVSLVLY_					0	0	0		ENST00000519180.1_1_5:178349154-178349586:+|nuORF	ENST00000519180.1_1_5:178349154-178349586:+|nuORF	ENST00000519180.1_1_5:178349154-178349586:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	482.2922668457031	2	482.789318	963.564084	-0.16023	-7.7357E-05	-3.1086	-0.0015008	-3.2689	-0.0015782	482.7878145677557	17.104	0.35418	16.494	16.259	16.613	-0.6107					13	7	3	0	0	0	0.20789	1	188	188		12.207	0	1	50945			64630	13131	42974	42992	73294	73294					0.08084412734126545
VTCSKGTRTR	10	Unmodified	_VTCSKGTRTR_					0	0	0		ENST00000485991.5_1_X:47485455-47487711:-|nuORF;ENSG00000126759|ENST00000396992|CFP	ENST00000485991.5_1_X:47485455-47487711:-|nuORF	ENST00000485991.5_1_X:47485455-47487711:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.7963256835938	2	554.798214	1107.58188	-0.23484	-0.00013029	-2.6041	-0.0014448	-2.839	-0.0015751	554.796558209616	26.745	0.66422	26.786	26.47	27.134	0.040833					48	20	4	0	0	0	0.40664	1	1145	1145		63.534	3.4156	1	214690			64631	3465	42975	42993	73295	73295					0.0323880471735265
VTDLPKKPS	9	Unmodified	_VTDLPKKPS_					0	0	0		ENSG00000133246|ENST00000423345|PRAM1	ENSG00000133246|ENST00000423345|PRAM1	ENSG00000133246|ENST00000423345|PRAM1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.7938537597656	2	492.78985	983.565146	-0.8454	-0.0004166	0.47146	0.00023233	-0.37394	-0.00018427	492.7897090609867	31.851	0.9009	31.977	31.431	32.332	0.12642					44	20	3	0	0	0	0.2083	1	2206	2206		72.879	7.4139	1	226950			64632	3868	42976	42994	73296	73296					0.07270627103048355
VTDNVKIVP	9	Unmodified	_VTDNVKIVP_					0	0	0			REV__ENSG00000129824|ENST00000250784|RPS4Y1	REV__ENSG00000129824|ENST00000250784|RPS4Y1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.7904968261719	2	492.78985	983.565146	0.32328	0.00015931	-1.0263	-0.00050573	-0.70298	-0.00034642	492.7890910007839	31.844	0.8975	31.951	31.377	32.274	0.10707					35	20	2	0	0	0	0.38563	1	2194	2194		58.782	4.0056	1	214070	+		64633	18835	42977	42995	73297	73297					0.07270627103059724
VTDQHRHRRCL	11	Unmodified	_VTDQHRHRRCL_					0	0	0		nc|ENSG00000100490|Q00532-2|CDKL1	nc|ENSG00000100490|Q00532-2|CDKL1	nc|ENSG00000100490|Q00532-2|CDKL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	474.2478332519531	3	474.249471	1419.72658	-0.3929	-0.00018633	-3.0362	-0.0014399	-3.4291	-0.0016262	474.24798345812246	17.835	0.46739	17.756	17.602	18.07	-0.078943					56	19	4	0	0	0	0.67041	1	266	266		36.318	5.7488	1	288830			64634	14814	42978	42996	73298	73298					0.03350865917195733
VTDSIRDEY	9	Unmodified	_VTDSIRDEY_					0	0	0		ENST00000547548.1_1_12:32866256-32875568:+|nuORF;nc|ENSG00000087470|O00429-7|DNM1L;nc|ENSG00000087470|O00429-4|DNM1L;nc|ENSG00000087470|O00429-5|DNM1L;nc|ENSG00000087470|O00429-3|DNM1L;nc|ENSG00000087470|O00429-9|DNM1L;nc|ENSG00000087470|O00429-2|DNM1L;ENSG00000087470|ENST00000549701|DNM1L;nc|ENSG00000087470|O00429-8|DNM1L;nc|ENSG00000087470|O00429-6|DNM1L	ENST00000547548.1_1_12:32866256-32875568:+|nuORF	ENST00000547548.1_1_12:32866256-32875568:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.2582397460938	2	549.259111	1096.50367	-0.64058	-0.00035185	0.16025	8.8017E-05	-0.48034	-0.00026383	549.2590311254925	39.999	0.55963	39.955	39.709	40.269	-0.043694					25	12	3	0	0	0	0.17881	1	2920	2920		78.264	23.487	1	134030			64635	1578	42979	42997	73299	73299					-0.04072349386888163
VTDSIRDEY	9	Unmodified	_VTDSIRDEY_					0	0	0		ENST00000547548.1_1_12:32866256-32875568:+|nuORF;nc|ENSG00000087470|O00429-7|DNM1L;nc|ENSG00000087470|O00429-4|DNM1L;nc|ENSG00000087470|O00429-5|DNM1L;nc|ENSG00000087470|O00429-3|DNM1L;nc|ENSG00000087470|O00429-9|DNM1L;nc|ENSG00000087470|O00429-2|DNM1L;ENSG00000087470|ENST00000549701|DNM1L;nc|ENSG00000087470|O00429-8|DNM1L;nc|ENSG00000087470|O00429-6|DNM1L	ENST00000547548.1_1_12:32866256-32875568:+|nuORF	ENST00000547548.1_1_12:32866256-32875568:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.2574462890625	2	549.259111	1096.50367	0.30187	0.0001658	-0.83376	-0.00045795	-0.5319	-0.00029215	549.2586574157075	39.902	0.48147	39.991	39.722	40.203	0.088375					18	11	2	0	0	0	0.17181	2	2496	2483;2496		79.713	26.776	1	215410			64636	1578	42979	42997	73300;73301	73301					-0.04072349386888163
VTDSIRDEY	9	Unmodified	_VTDSIRDEY_					0	0	0		ENST00000547548.1_1_12:32866256-32875568:+|nuORF;nc|ENSG00000087470|O00429-7|DNM1L;nc|ENSG00000087470|O00429-4|DNM1L;nc|ENSG00000087470|O00429-5|DNM1L;nc|ENSG00000087470|O00429-3|DNM1L;nc|ENSG00000087470|O00429-9|DNM1L;nc|ENSG00000087470|O00429-2|DNM1L;ENSG00000087470|ENST00000549701|DNM1L;nc|ENSG00000087470|O00429-8|DNM1L;nc|ENSG00000087470|O00429-6|DNM1L	ENST00000547548.1_1_12:32866256-32875568:+|nuORF	ENST00000547548.1_1_12:32866256-32875568:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.2578735351562	2	549.259111	1096.50367	0.2537	0.00013935	-0.90595	-0.0004976	-0.65225	-0.00035825	549.2585820013635	40.013	0.42438	39.965	39.692	40.116	-0.04789					17	10	2	0	0	0	0.71772	1	2495	2495		39.253	1.4413	1	180160			64637	1578	42979	42997	73302	73302					-0.04072349386888163
VTDSIRDEY	9	Unmodified	_VTDSIRDEY_					0	0	0		ENST00000547548.1_1_12:32866256-32875568:+|nuORF;nc|ENSG00000087470|O00429-7|DNM1L;nc|ENSG00000087470|O00429-4|DNM1L;nc|ENSG00000087470|O00429-5|DNM1L;nc|ENSG00000087470|O00429-3|DNM1L;nc|ENSG00000087470|O00429-9|DNM1L;nc|ENSG00000087470|O00429-2|DNM1L;ENSG00000087470|ENST00000549701|DNM1L;nc|ENSG00000087470|O00429-8|DNM1L;nc|ENSG00000087470|O00429-6|DNM1L	ENST00000547548.1_1_12:32866256-32875568:+|nuORF	ENST00000547548.1_1_12:32866256-32875568:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	549.259111	1096.50367	-0.23667	-0.00012999	-1.0861	-0.00059653	-1.3227	-0.00072652	549.2584545354005	40.096	0.49282	40.065	39.846	40.339	-0.030991	0.075935	-0.00066505	NaN	79.713	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	140620			64638	1578	42979	42997							-0.04072349386888163
VTDTGALYLY	10	Unmodified	_VTDTGALYLY_					0	0	0		ENST00000489684.2_1_3:49044864-49050780:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENSG00000178252|ENST00000608424|WDR6	ENST00000489684.2_1_3:49044864-49050780:+|nuORF	ENST00000489684.2_1_3:49044864-49050780:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.2848510742188	2	558.284597	1114.55464	0.12978	7.2453E-05	-0.32714	-0.00018264	-0.19736	-0.00011018	558.2839602042076	75.399	0.59948	75.353	75.025	75.624	-0.045982					34	15	3	0	0	0	0.71042	1	7440	7440		44.117	8.4985	1	108530			64639	7196	42980	42998	73303	73303					0.0019459965794794698
VTDTGRYLL	9	Unmodified	_VTDTGRYLL_					0	0	0		nc|ENSG00000135945|Q9UBZ9-3|REV1	nc|ENSG00000135945|Q9UBZ9-3|REV1	nc|ENSG00000135945|Q9UBZ9-3|REV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.2810668945312	2	519.284931	1036.55531	0.22552	0.00011711	-0.32212	-0.00016727	-0.096599	-5.0163E-05	519.2846932163961	55.342	0.87309	55.91	55.531	56.404	0.56836					49	20	5	0	0	0	0.17307	1	5698	5698		79.451	10.664	1	935340			64640	14937	42981	42999	73304	73304					0.03849439097666618
VTDVEQIV	8	Unmodified	_VTDVEQIV_					0	0	0			REV__ENSG00000183747|ENST00000573854|ACSM2A	REV__ENSG00000183747|ENST00000573854|ACSM2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7455139160156	2	451.745108	901.475663	-0.092061	-4.1588E-05	1.7939	0.00081036	1.7018	0.00076878	451.7457658869967	34.705	0.79864	34.701	34.334	35.132	-0.0047417					49	20	3	0	0	0	0.60155	1	2105	2105		71.378	0	1	211490	+		64641	16530	42982	43000	73305	73305					0.020983724236771195
VTDVEQIV	8	Unmodified	_VTDVEQIV_					0	0	0			REV__ENSG00000183747|ENST00000573854|ACSM2A	REV__ENSG00000183747|ENST00000573854|ACSM2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7459716796875	2	451.745108	901.475663	-0.61831	-0.00027932	2.3255	0.0010506	1.7072	0.00077123	451.7459480558959	34.844	1.0293	34.787	34.355	35.384	-0.056385					46	23	3	0	0	0	0.73851	1	2200	2200		65.803	7.9919	1	301340	+		64642	16530	42982	43000	73306	73306					0.020983724236771195
VTDVEQIV	8	Unmodified	_VTDVEQIV_					0	0	0			REV__ENSG00000183747|ENST00000573854|ACSM2A	REV__ENSG00000183747|ENST00000573854|ACSM2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.7449645996094	2	451.745108	901.475663	-0.34142	-0.00015424	1.894	0.00085561	1.5526	0.00070137	451.7457899922303	34.694	1.135	34.701	34.293	35.428	0.0063934					58	27	3	0	0	0	0.84634	2	2145	2125;2145		60.294	0	1	280890	+		64643	16530	42982	43000	73307;73308	73308					0.020983724236771195
VTDVEQIV	8	Unmodified	_VTDVEQIV_					0	0	0			REV__ENSG00000183747|ENST00000573854|ACSM2A	REV__ENSG00000183747|ENST00000573854|ACSM2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.7459716796875	2	451.745108	901.475663	0.15669	7.0785E-05	1.8522	0.0008367	2.0088	0.00090749	451.74584001279584	34.375	0.68409	34.484	34.169	34.853	0.10829					52	30	2	0	0	0	0.60357	1	1729	1729		71.296	2.811	1	197020	+		64644	16530	42982	43000	73309	73309					0.020983724236771195
VTDVEQIV	8	Unmodified	_VTDVEQIV_					0	0	0			REV__ENSG00000183747|ENST00000573854|ACSM2A	REV__ENSG00000183747|ENST00000573854|ACSM2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.74609375	2	451.745108	901.475663	1.1627	0.00052525	0.59431	0.00026848	1.757	0.00079372	451.74501177716866	34.109	0.65865	34.414	34.117	34.776	0.30494					34	15	3	0	0	0	0.41376	1	2524	2524		79.939	11.455	1	1538300	+		64645	16530	42982	43000	73310	73310					0.020983724236771195
VTDVEQIV	8	Unmodified	_VTDVEQIV_					0	0	0			REV__ENSG00000183747|ENST00000573854|ACSM2A	REV__ENSG00000183747|ENST00000573854|ACSM2A	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	451.745108	901.475663	0.15669	7.0785E-05	1.8522	0.0008367	2.0088	0.00090749	451.74584001279584	34.375	0.68409	34.484	34.169	34.853	0.10829	-0.069291	-9.499E-05	NaN	79.939	52	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197020	+		64646	16530	42982	43000							0.020983724236771195
VTEASTGTYT	10	Unmodified	_VTEASTGTYT_					0	0	0		ENSG00000037280|ENST00000261937|FLT4;nc|ENSG00000037280|P35916-3|FLT4;nc|ENSG00000037280|P35916-1|FLT4;ENST00000507059.5_1_5:180043993-180056331:-|nuORF	ENSG00000037280|ENST00000261937|FLT4;ENST00000507059.5_1_5:180043993-180056331:-|nuORF	ENSG00000037280|ENST00000261937|FLT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	515.23974609375	2	515.240386	1028.46622	-0.37021	-0.00019075	0.34586	0.0001782	-0.02435	-1.2546E-05	515.2404361126636	47.52	0.54141	47.539	47.235	47.776	0.018967					38	17	3	0	0	0	0.3985	1	3570	3570		64.207	1.2288	1	721160			64647	907;12951	42983	43001	73311	73311					-0.04687440652492114
VTEDLQAWY	9	Unmodified	_VTEDLQAWY_					0	0	0			REV__nc|ENSG00000103549|O75150-3|RNF40	REV__nc|ENSG00000103549|O75150-3|RNF40	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.7644653320312	2	562.766571	1123.51859	-0.60348	-0.00033962	-2.8846	-0.0016234	-3.4881	-0.001963	562.7648050924349	30.328	0.48611	30.356	30.141	30.627	0.028618					27	10	3	0	0	0	0.47272	1	1981	1981		53.351	2.1588	1	268350	+		64648	17422	42984	43002	73312	73312					-0.03822857518912315
VTEDSFCCCE	10	Unmodified	_VTEDSFCCCE_					0	0	0		ENSG00000081913|ENST00000262719|PHLPP1;nc|ENSG00000081913|O60346-2|PHLPP1	ENSG00000081913|ENST00000262719|PHLPP1	ENSG00000081913|ENST00000262719|PHLPP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.194091796875	2	568.190667	1134.36678	-0.17924	-0.00010184	2.9949	0.0017016	2.8156	0.0015998	568.1923039554042	24.392	2.2471	24.346	23.523	25.77	-0.04598					118	55	3	0	0	0	0.85466	1	878	878		20.947	5.3051	1	64907			64649	1474	42985	43003	73313	73313					-0.1950266592477874
VTEFRKRVVK	10	Unmodified	_VTEFRKRVVK_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.5574645996094	3	421.262823	1260.76664	0.99731	0.00042013	-1.5495	-0.00065275	-0.5522	-0.00023262	421.26198600591175	23.476	0.64795	23.094	22.928	23.576	-0.38178					20	14	2	0	0	0	0.37624	1	1064	1064		9.2118	0.41249	1	74657			64650	5333	42986	43004	73314	73314					0.14668735859390836
VTELEILLLPI	11	Unmodified	_VTELEILLLPI_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.26446533203125	3	418.263607	1251.76899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.634	1	49.66	49.16	50.16	0.025574								0	0	0	0.56276	1	3852	3852		8.7993	0	1		+		64651	18979	42987	43005	73315	73315					0.15317726753869465
VTEPKEPGE	9	Unmodified	_VTEPKEPGE_					0	0	0		ENSG00000150893|ENST00000280481|FREM2;nc|ENSG00000150893|Q5SZK8-2|FREM2	ENSG00000150893|ENST00000280481|FREM2;nc|ENSG00000150893|Q5SZK8-2|FREM2	nc|ENSG00000150893|Q5SZK8-2|FREM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	493.2460632324219	2	493.245472	984.476391	0.44489	0.00021944	0.95609	0.00047159	1.401	0.00069103	493.24582366684365	27.777	1.5267	27.813	27.395	28.922	0.03607					129	51	4	0	0	0	0.44421	1	1296	1296		54.776	3.4409	1	868330			64652	5085;14988	42988	43006	73316	73316					-0.01646832927281139
VTEVKPVSA	9	Unmodified	_VTEVKPVSA_					0	0	0			REV__ENSG00000100664|ENST00000216554|EIF5	REV__ENSG00000100664|ENST00000216554|EIF5	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.26849365234375	2	465.26875	928.522947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.076	1	81.076	80.576	81.576	0								0	0	0	0.30778	1	7508	7508		27.882	4.8398	1		+		64653	17212	42989	43007	73317	73317					0.05582651694658125
VTFCNLNRFQT	11	Unmodified	_VTFCNLNRFQT_					0	0	0		ENSG00000256394|ENST00000537611|ASIC5	ENSG00000256394|ENST00000537611|ASIC5	ENSG00000256394|ENST00000537611|ASIC5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	448.75103759765625	3	448.223928	1341.64996	-1.053	-0.00047196	1.4187	0.00063589	0.36572	0.00016393	448.2240646082663	27.299	0.43978	27.123	26.971	27.41	-0.17559					10	9	2	0	0	0	0.17504	1	1590	1590		19.627	7.6946	1	39216			64654	8896	42990	43008	73318	73318					-0.007203704226867558
VTFEDIAIY	9	Unmodified	_VTFEDIAIY_					0	0	0		ENSG00000171649|ENST00000597850|ZIK1	ENSG00000171649|ENST00000597850|ZIK1	ENSG00000171649|ENST00000597850|ZIK1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.30517578125	2	535.773865	1069.53318	-0.03936	-2.1088E-05	-0.32432	-0.00017376	-0.36368	-0.00019485	535.7743310771419	51.597	0.42308	52.032	51.822	52.245	0.43505					16	9	2	0	0	0	0.20789	1	5112	5112		17.365	0	1	214650			64655	6692	42991	43009	73319	73319					0.001192146292396501
VTFLASGLLL	10	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VTFLASGLLL_					1	0	0		ENST00000557114.5_1_14:20797408-20798710:-|nuORF	ENST00000557114.5_1_14:20797408-20798710:-|nuORF	ENST00000557114.5_1_14:20797408-20798710:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3265380859375	2	538.323525	1074.6325	3.4335	0.0018483	2.8142	0.001515	6.2477	0.0033633	538.3249799110414	101.02	2.8397	100.97	100.36	103.19	-0.052109					301	67	6	0	0	0	0.74274	3	11061	11061;11146;11230		42.396	14.514	1	75550000			64656	13763	42992	43010	73320;73321;73322	73320					0.09816657314013355
VTFMSNMLYAC	11	Unmodified	_VTFMSNMLYAC_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.275146484375	2	640.27962	1278.54469	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.021	1	32.004	31.504	32.504	-0.017464								0	0	0	0.56276	1	1482	1482		27.047	0.3544	1				64657	15200	42993	43011	73323	73323					-0.08344370934901235
VTFTIGVLGLF	11	Unmodified	_VTFTIGVLGLF_					0	0	0			REV__nc|ENSG00000164325|Q8WUU8-2|TMEM174	REV__nc|ENSG00000164325|Q8WUU8-2|TMEM174	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.845947265625	2	583.844625	1165.6747	0.97491	0.00056919	3.4103	0.0019911	4.3852	0.0025603	583.8462335453149	105.71	0.63963	105.85	105.5	106.14	0.13821					27	16	2	0	0	0	0.7342	1	12887	12887		25.574	1.0549	1	126680	+		64658	21069	42994	43012	73324	73324					0.09848632722355433
VTFVALAL	8	Unmodified	_VTFVALAL_					0	0	0		nc|ENSG00000005206|Q8TCT7-4|SPPL2B;ENSG00000005206|ENST00000613503|SPPL2B;ENST00000589515.2_1_19:2343134-2351610:+|nuORF	nc|ENSG00000005206|Q8TCT7-4|SPPL2B	nc|ENSG00000005206|Q8TCT7-4|SPPL2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	417.2583923339844	2	417.260197	832.50584	-1.9224	-0.00080214	-2.3132	-0.00096519	-4.2356	-0.0017673	417.25909621152056	20.97	1.7414	21.015	20.763	22.505	0.045399					166	84	3	0	0	0	0.87276	1	522	522		29.842	0	1	679020			64659	678	42995	43013	73325	73325					0.08288775879498189
VTFYLVLI	8	Unmodified	_VTFYLVLI_					0	0	0			REV__nc|ENSG00000157087|Q01814-4|ATP2B2	REV__nc|ENSG00000157087|Q01814-4|ATP2B2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.77197265625	2	484.296779	966.579005	-0.094976	-4.5997E-05	-2.7709	-0.0013419	-2.8659	-0.0013879	484.295258286586	26.96	0.93825	26.784	26.386	27.324	-0.17559					39	20	3	0	0	0	0.4196	1	1571	1571		29.842	0	1	198870	+		64660	20525	42996	43014	73326	73326					0.09437904602134495
VTGAALYVK	9	Unmodified	_VTGAALYVK_					0	0	0			REV__nc|ENSG00000170011|Q8NFW9-2|MYRIP	REV__nc|ENSG00000170011|Q8NFW9-2|MYRIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	461.2743835449219	2	461.273835	920.533118	0.54579	0.00025176	-1.4365	-0.00066261	-0.89069	-0.00041085	461.2729476357354	51.297	0.62033	52.049	51.818	52.438	0.75174					34	14	3	0	0	0	0.69624	1	5128	5128		40.778	0	1	1240100	+		64661	30023	42997	43015	73327	73327					0.0696725941988916
VTGGATGA	8	Unmodified	_VTGGATGA_					0	0	0			REV__nc|ENSG00000114853|Q9UFB7-2|ZBTB47	REV__nc|ENSG00000114853|Q9UFB7-2|ZBTB47	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3832397460938	1	633.320231	632.312954	1.3845	0.00087684	4.3642	0.0027639	5.7487	0.0036408	633.3216139175825	51.202	0.20622	51.237	51.159	51.365	0.034588					6	4	2	0	0	0	0.4196	1	4077	4077		3.6843	0	1	35774	+		64662	18070	42998	43016	73328	73328					-0.017909661876728933
VTGHKVLF	8	Unmodified	_VTGHKVLF_					0	0	0		nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF	nc|ENSG00000198420|Q9Y4C2-2|TCAF1	nc|ENSG00000198420|Q9Y4C2-2|TCAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7694396972656	2	450.76872	899.522887	0.39817	0.00017948	2.665	0.0012013	3.0632	0.0013808	450.77044796602024	50.34	0.9221	50.344	49.766	50.688	0.0035973					33	20	3	0	0	0	0.80706	1	4291	4291		19.36	0	1	73668			64663	8271	42999	43017	73329	73329					0.06910696485317658
VTGHKVLF	8	Unmodified	_VTGHKVLF_					0	0	0		nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF	nc|ENSG00000198420|Q9Y4C2-2|TCAF1	nc|ENSG00000198420|Q9Y4C2-2|TCAF1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	450.76872	899.522887	-0.013906	-6.2685E-06	2.413	0.0010877	2.3991	0.0010814	450.7705530233351	50.205	0.70468	50.202	49.949	50.654	-0.0030327	-0.083303	-0.001975	NaN	19.36	36	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32301			64664	8271	42999	43017							0.06910696485317658
VTGHKVLF	8	Unmodified	_VTGHKVLF_					0	0	0		nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF	nc|ENSG00000198420|Q9Y4C2-2|TCAF1	nc|ENSG00000198420|Q9Y4C2-2|TCAF1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	450.76872	899.522887	-0.73957	-0.00033338	5.0392	0.0022715	4.2996	0.0019381	450.77101064439563	50.322	0.91977	50.298	49.677	50.597	-0.02343	0.013178	0.00039256	NaN	19.36	31	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73741			64665	8271	42999	43017							0.06910696485317658
VTGHKVLF	8	Unmodified	_VTGHKVLF_					0	0	0		nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1;ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF	nc|ENSG00000198420|Q9Y4C2-2|TCAF1	nc|ENSG00000198420|Q9Y4C2-2|TCAF1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	450.76872	899.522887	-0.44082	-0.00019871	6.0029	0.0027059	5.5621	0.0025072	450.7710297024317	50.388	0.91238	50.296	49.888	50.801	-0.091797	0.011093	0.0012614	NaN	19.36	32	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62351			64666	8271	42999	43017							0.06910696485317658
VTGILPLY	8	Unmodified	_VTGILPLY_					0	0	0			REV__ENST00000495425.6_1_17:19458825-19480863:+|nuORF	REV__ENST00000495425.6_1_17:19458825-19480863:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	438.7669677734375	2	438.265479	874.516405	-1.8646	-0.00081717	-3.5126	-0.0015394	-5.3771	-0.0023566	438.26378289317	40.865	4.8395	40.865	40.619	45.459	0					239	127	3	0	0	0	0.86791	1	2988	2988		28.254	6.5519	1	3384400	+		64667	27738	43000	43018	73330	73330					0.07412758533951092
VTGKSRGHLV	10	Unmodified	_VTGKSRGHLV_					0	0	0		ENST00000529381.1_1_11:129685783-129722578:+|nuORF	ENST00000529381.1_1_11:129685783-129722578:+|nuORF	ENST00000529381.1_1_11:129685783-129722578:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.310791015625	2	527.311815	1052.60908	0.30458	0.00016061	-1.4031	-0.00073988	-1.0985	-0.00057927	527.3109007634706	82.716	1.747	83.19	82.836	84.583	0.47384					72	41	3	0	0	0	0.8545	1	9616	9616		36.447	0.82846	1	1438500			64668	13321	43001	43019	73331	73331					0.08487656320039605
VTGLLLVPPPN	11	Unmodified	_VTGLLLVPPPN_					0	0	0			REV__ENST00000603865.1_1_11:75507249-75507624:+|nuORF	REV__ENST00000603865.1_1_11:75507249-75507624:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3397827148438	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7434	1	12551	12551		23.523	2.5758	1	4071000	+		64669	29350	43002	43020	73332	73332					0.11535748579603933
VTGNGIALGQ	10	Unmodified	_VTGNGIALGQ_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.2558288574219	2	465.256174	928.497795	-0.23044	-0.00010722	0.42849	0.00019936	0.19805	9.2143E-05	465.2561051188786	25.962	1.0624	25.704	25.424	26.486	-0.2572					62	23	5	0	0	0	0.30722	1	1392	1392		71.877	0.58177	1	1300900	+		64670	18987	43003	43021	73333	73333					0.030685968920806772
VTGSGRVEAAL	11	Unmodified	_VTGSGRVEAAL_					0	0	0			REV__ENSG00000178502|ENST00000319121|KLHL11	REV__ENSG00000178502|ENST00000319121|KLHL11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	530.2918701171875	2	530.293288	1058.57202	-0.73575	-0.00039016	0.97336	0.00051616	0.23761	0.000126	530.2937139916106	90.612	4.1498	90.612	89.43	93.579	0					288	96	5	0	0	0	0.7144	1	9082	9082		29.17	0	1	1390700	+		64671	22283	43004	43022	73334	73334					0.04507939983614051
VTGSKGGGTIR	11	Unmodified	_VTGSKGGGTIR_					0	0	0			REV__ENSG00000174501|ENST00000295246|ANKRD36C	REV__ENSG00000174501|ENST00000295246|ANKRD36C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.793701171875	2	516.793455	1031.57236	-0.83709	-0.0004326	0.85733	0.00044306	0.020239	1.0459E-05	516.79385514366	88.688	3.593	88.688	87.512	91.105	0					228	83	4	0	0	0	0.67778	1	8618	8618		35.152	3.6222	1	490270	+		64672	21999	43005	43023	73335	73335					0.05783359703491442
VTGSKGGGTIR	11	Unmodified	_VTGSKGGGTIR_					0	0	0			REV__ENSG00000174501|ENST00000295246|ANKRD36C	REV__ENSG00000174501|ENST00000295246|ANKRD36C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7935791015625	2	516.793455	1031.57236	1.5571	0.00080467	-1.5393	-0.0007955	0.017752	9.1739E-06	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.67778	1	9271	9271		35.152	3.6222	1	834930	+		64673	21999	43005	43023	73336	73336					0.05783359703491442
VTGSVTKIA	9	Unmodified	_VTGSVTKIA_					0	0	0		ENST00000398080.5_1_X:17755712-17764154:+|nuORF	ENST00000398080.5_1_X:17755712-17764154:+|nuORF	ENST00000398080.5_1_X:17755712-17764154:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2633056640625	2	438.263468	874.512382	-0.013576	-5.9498E-06	-0.084501	-3.7034E-05	-0.098077	-4.2984E-05	438.2634390930291	36.959	3.8951	36.935	36.636	40.531	-0.023979					230	92	5	0	0	0	0.74721	1	2533	2533		37.159	1.9584	1	3673500			64674	11173	43006	43024	73337	73337					0.07010669040221273
VTGVRSRESN	10	Unmodified	_VTGVRSRESN_					0	0	0			REV__ENST00000446716.5_1_2:220084109-220084259:-|nuORF	REV__ENST00000446716.5_1_2:220084109-220084259:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7930297851562	2	552.791444	1103.56833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.24	1	16.629	16.129	17.129	-0.6107								0	0	0	0.45132	1	236	236		41.427	8.6142	1		+		64675	26809	43007	43025	73338	73338					0.020692702097676374
VTGVVAYLL	9	Unmodified	_VTGVVAYLL_					0	0	0			REV__ENSG00000066230|ENST00000264938|SLC9A3	REV__ENSG00000066230|ENST00000264938|SLC9A3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	467.2265930175781	2	467.784036	933.553519	-1.0905	-0.0005101	-1.4802	-0.00069239	-2.5706	-0.0012025	467.7830351824765	31.182	0.65702	31.262	30.901	31.558	0.079836					22	14	2	0	0	0	0.20789	1	2108	2108		6.7355	0	1	146140	+		64676	16519	43008	43026	73339	73339					0.08408430079703066
VTHCLPLDAP	10	Unmodified	_VTHCLPLDAP_					0	0	0			REV__ENSG00000120057|ENST00000266066|SFRP5	REV__ENSG00000120057|ENST00000266066|SFRP5	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	533.2748413085938	2	533.273509	1064.53247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.967	1	56.954	56.454	57.454	-0.012203								0	0	0	0.3847	1	5127	5127		68.787	0.30212	1		+		64677	18396	43009	43027	73340	73340					0.00278096708530029
VTHTRKHIK	9	Unmodified	_VTHTRKHIK_					0	0	0			REV__chr13:99969929-99970127|29|14.59|0.26|5.8|-|2|None,ZIC5|1	REV__chr13:99969929-99970127|29|14.59|0.26|5.8|-|2|None,ZIC5|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.33935546875	2	560.340907	1118.66726	3.1454	0.0017625	-4.1604	-0.0023312	-1.015	-0.00056875	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.78536	1	12862	12862		29.15	0	1	151040	+		64678	15583	43010	43028	73341	73341					0.11267337965296065
VTHTRKHIK	9	Unmodified	_VTHTRKHIK_					0	0	0			REV__chr13:99969929-99970127|29|14.59|0.26|5.8|-|2|None,ZIC5|1	REV__chr13:99969929-99970127|29|14.59|0.26|5.8|-|2|None,ZIC5|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.83642578125	2	560.340907	1118.66726	1.383	0.00077498	-2.3951	-0.0013421	-1.0121	-0.0005671	560.3394720232257	112.84	1.5011	112.87	112.76	114.26	0.028854					65	39	2	0	0	0	0.7932	1	12429	12429		23.042	2.0956	1	665690	+		64679	15583	43010	43028	73342	73342					0.11267337965296065
VTHTRKHIK	9	Unmodified	_VTHTRKHIK_					0	0	0			REV__chr13:99969929-99970127|29|14.59|0.26|5.8|-|2|None,ZIC5|1	REV__chr13:99969929-99970127|29|14.59|0.26|5.8|-|2|None,ZIC5|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3446044921875	2	560.340907	1118.66726	1.3844	0.00077572	-1.6205	-0.00090801	-0.23608	-0.00013229	560.3398338842395	118.75	0.66116	118.77	118.51	119.17	0.026466					37	27	2	0	0	0	0.78983	1	13105	13105		27.882	2.3082	1	39883	+		64680	15583	43010	43028	73343	73343					0.11267337965296065
VTHVFGSG	8	Unmodified	_VTHVFGSG_					0	0	0		ENSG00000128322|ENST00000330377|IGLL1	ENSG00000128322|ENST00000330377|IGLL1	ENSG00000128322|ENST00000330377|IGLL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.2047119140625	2	402.205953	802.397353	-1.7943	-0.00072169	1.1438	0.00046004	-0.65054	-0.00026165	402.20636046917366	98.897	1.8674	99.119	98.298	100.17	0.22262					109	43	3	0	0	0	0.884	1	10321	10321		33.516	5.2613	1	737490			64681	3537	43011	43029	73344	73344					-0.011750153708931066
VTIDACAL	8	Unmodified	_VTIDACAL_					0	0	0			REV__ENSG00000255307|ENST00000530810|OR52B2	REV__ENSG00000255307|ENST00000530810|OR52B2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.20904541015625	2	403.209847	804.40514	-0.60775	-0.00024505	-1.7885	-0.00072113	-2.3962	-0.00096618	403.2090521764512	85.615	1.3902	86.062	85.664	87.054	0.44736					79	33	4	0	0	0	0.81548	1	10056	10056		20.482	0	1	1223100	+		64682	23897	43012	43030	73345	73345					-0.004886241656663515
VTIDKLIQ	8	Unmodified	_VTIDKLIQ_					0	0	0			REV__ENST00000596710.1_1_19:21934351-21934702:+|nuORF	REV__ENST00000596710.1_1_19:21934351-21934702:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.2861022949219	2	465.286943	928.559333	-1.054	-0.00049039	1.3099	0.00060948	0.25595	0.00011909	465.28739467159795	77.149	0.82399	77.274	77.018	77.842	0.12486					104	39	4	0	0	0	0.889	1	7298	7298		35.152	0	1	1610000	+		64683	17695	43013	43031	73346	73346					0.09219528591370363
VTIDKLIQ	8	Unmodified	_VTIDKLIQ_					0	0	0			REV__ENST00000596710.1_1_19:21934351-21934702:+|nuORF	REV__ENST00000596710.1_1_19:21934351-21934702:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.2868957519531	2	465.286943	928.559333	0.55544	0.00025844	-0.35227	-0.00016391	0.20317	9.4533E-05	465.28665991732896	77.113	1.0041	77.248	76.927	77.932	0.13478					108	48	3	0	0	0	0.36391	1	7234	7234		85.161	0	1	1591900	+		64684	17695	43013	43031	73347	73347					0.09219528591370363
VTIDKLIQ	8	Unmodified	_VTIDKLIQ_					0	0	0			REV__ENST00000596710.1_1_19:21934351-21934702:+|nuORF	REV__ENST00000596710.1_1_19:21934351-21934702:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.28668212890625	2	465.286943	928.559333	-1.3462	-0.00062637	1.5269	0.00071045	0.18069	8.4074E-05	465.28751849052463	77.21	0.82004	77.301	76.982	77.802	0.091438					97	41	3	0	0	0	0.91546	1	7252	7252		44.377	0	1	1491000	+		64685	17695	43013	43031	73348	73348					0.09219528591370363
VTIDLLAQITI	11	Unmodified	_VTIDLLAQITI_					0	0	0			REV__nc|ENSG00000136141|Q9Y2L9-2|LRCH1	REV__nc|ENSG00000136141|Q9Y2L9-2|LRCH1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	400.57867431640625	3	400.579706	1198.71729	3.1807	0.0012741	-1.113	-0.00044584	2.0677	0.00082828	400.5790725213542	114.62	1.1819	114.65	114.26	115.44	0.026466					75	31	3	0	0	0	0.74771	1	12596	12596		22.562	0.78116	1	88404	+		64686	29868	43014	43032	73349	73349					0.1258798305993878
VTIDLLAQITI	11	Unmodified	_VTIDLLAQITI_					0	0	0			REV__nc|ENSG00000136141|Q9Y2L9-2|LRCH1	REV__nc|ENSG00000136141|Q9Y2L9-2|LRCH1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.580078125	3	400.579706	1198.71729	3.4037	0.0013634	-1.2228	-0.00048981	2.1809	0.00087364	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.75121	1	13613	13613		21.78	1.75	1	5321000	+		64687	29868	43014	43032	73350	73350					0.1258798305993878
VTIGFGQIKN	10	Unmodified	_VTIGFGQIKN_					0	0	0		ENSG00000181045|ENST00000361193|SLC26A11	ENSG00000181045|ENST00000361193|SLC26A11	ENSG00000181045|ENST00000361193|SLC26A11	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.8058471679688	2	538.808574	1075.60259	-0.69163	-0.00037266	-2.7906	-0.0015036	-3.4823	-0.0018763	538.8070299475025	90.865	3.8094	90.865	89.559	93.368	0					216	88	3	0	0	0	0.8651	1	8812	8812		25.574	1.0549	1	563820			64688	7370	43015	43033	73351	73351					0.06781718368665679
VTIITGLPL	9	Unmodified	_VTIITGLPL_					0	0	0		ENST00000476954.1_1_1:156220380-156221068:-|nuORF;ENSG00000198952|ENST00000361813|SMG5	ENST00000476954.1_1_1:156220380-156221068:-|nuORF	ENST00000476954.1_1_1:156220380-156221068:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8001403808594	2	463.799686	925.584819	-1.1872	-0.0005506	2.6442	0.0012264	1.4571	0.00067579	463.80074391702703	41.648	1.5471	41.608	41.079	42.626	-0.039845					90	38	3	0	0	0	0.78536	1	3209	3209		29.15	4.9468	1	510860			64689	8379	43016	43034	73352	73352					0.11905003113804469
VTIITGLPL	9	Unmodified	_VTIITGLPL_					0	0	0		ENST00000476954.1_1_1:156220380-156221068:-|nuORF;ENSG00000198952|ENST00000361813|SMG5	ENST00000476954.1_1_1:156220380-156221068:-|nuORF	ENST00000476954.1_1_1:156220380-156221068:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.80010986328125	2	463.799686	925.584819	0.25708	0.00011924	1.8007	0.00083518	2.0578	0.00095442	463.8003494632068	44.4	2.4959	44.449	42.665	45.161	0.048996					165	61	4	0	0	0	0.7932	1	3021	3021		23.042	0	1	1231300			64690	8379	43016	43034	73353	73353					0.11905003113804469
VTIKPPGL	8	Unmodified	_VTIKPPGL_					0	0	0		ENSG00000198646|ENST00000359003|NCOA6	ENSG00000198646|ENST00000359003|NCOA6	ENSG00000198646|ENST00000359003|NCOA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2672424316406	2	412.765646	823.516739	1.2445	0.00051368	-1.8023	-0.00074392	-0.55779	-0.00023024	412.76609709283645	41.289	1.0546	41.296	40.74	41.795	0.0065727					35	27	2	0	0	0	0.87922	1	3062	3062		31.955	2.1133	1	169780			64691	8300	43017	43035	73354	73354					0.09792178253815109
VTIQLAQKV	9	Unmodified	_VTIQLAQKV_					0	0	0		ENSG00000167098|ENST00000356173|SUN5	ENSG00000167098|ENST00000356173|SUN5	ENSG00000167098|ENST00000356173|SUN5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.31280517578125	2	500.313492	998.612431	-1.2878	-0.00064428	1.1774	0.00058906	-0.11036	-5.5215E-05	500.31397417451893	78.74	0.56955	78.834	78.567	79.136	0.0942					38	16	3	0	0	0	0.39367	1	7406	7406		58.23	5.2932	1	206800			64692	6265	43018	43036	73355	73355					0.11306906374045411
VTIRVPTHP	9	Unmodified	_VTIRVPTHP_					0	0	0		ENSG00000100580|ENST00000216468|TMED8	ENSG00000100580|ENST00000216468|TMED8	ENSG00000100580|ENST00000216468|TMED8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.3025207519531	2	510.303458	1018.59236	0.30458	0.00015543	-0.74879	-0.00038211	-0.44421	-0.00022668	510.30290885562005	51.133	0.45562	51.568	51.285	51.74	0.43505					19	10	2	0	0	0	0.69624	1	5064	5064		40.778	5.1599	1	479880			64693	1850	43019	43037	73356	73356					0.08381155434085485
VTITDLQGL	9	Unmodified	_VTITDLQGL_					0	0	0		ENSG00000257743|ENST00000477922|MGAM2	ENSG00000257743|ENST00000477922|MGAM2	ENSG00000257743|ENST00000477922|MGAM2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.2749328613281	2	480.274032	958.533512	-0.29821	-0.00014322	0.54437	0.00026145	0.24616	0.00011822	480.2741482358005	57.116	0.73643	57.512	57.16	57.896	0.39672					46	17	3	0	0	0	0.14236	3	5925	5925;5939;5951		85.161	0	1	1979000			64694	8908	43020	43038	73357;73358;73359	73357					0.05258634349092972
VTIVDKLQ	8	Unmodified	_VTIVDKLQ_					0	0	0		ENSG00000179002|ENST00000375371|TAS1R2	ENSG00000179002|ENST00000375371|TAS1R2	ENSG00000179002|ENST00000375371|TAS1R2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.2786865234375	2	458.279118	914.543683	-1.5855	-0.0007266	0.54861	0.00025142	-1.0369	-0.00047518	458.2792815260094	48.149	1.0294	48.618	48.045	49.074	0.46941					57	25	3	0	0	0	0.93293	1	4641	4641		51.335	0	1	1260300			64695	7238	43021	43039	73360	73360					0.08299242074338053
VTKDRIID	8	Unmodified	_VTKDRIID_					0	0	0		nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;ENSG00000147548|ENST00000317025|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.2817687988281	2	480.279649	958.544745	-1.6792	-0.00080648	4.2937	0.0020622	2.6145	0.0012557	480.2815170971303	99.526	0.96476	99.712	99.198	100.16	0.18582					47	22	3	0	0	0	0.89679	1	10335	10335		37.812	0.65241	1	356250			64696	4909	43022	43040	73361	73361					0.06381456443239131
VTKKETAYKLK	11	Unmodified	_VTKKETAYKLK_					0	0	0			REV__ENSG00000212916|ENST00000418460|MAP10	REV__ENSG00000212916|ENST00000418460|MAP10	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.93438720703125	3	436.934372	1307.78129	0.27454	0.00011996	-1.2056	-0.00052675	-0.93102	-0.00040679	436.9337888157145	20.681	2.5222	20.051	19.49	22.012	-0.62961					153	62	4	0	0	0	0.73647	1	673	673		25.068	5.8051	1	646260	+		64697	23603	43023	43041	73362	73362					0.13970763216866544
VTKKKVSYV	9	Unmodified	_VTKKKVSYV_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.3610229492188	2	526.329142	1050.64373	-0.033624	-1.7697E-05	2.0567	0.0010825	2.0231	0.0010648	526.3302290816054	33.547	0.13731	33.549	33.448	33.586	0.0026016					4	2	2	0	0	0	0.20789	1	1981	1981		26.693	5.746	1	20092			64698	1742	43024	43042	73363	73363					0.12043479408134772
VTKKTAVS	8	Unmodified	_VTKKTAVS_					0	0	0			REV__ENSG00000065154|ENST00000368845|OAT	REV__ENSG00000065154|ENST00000368845|OAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.2583923339844	2	417.258185	832.501818	0.48253	0.00020134	0.092918	3.8771E-05	0.57545	0.00024011	417.2580690393574	20.858	1.9039	20.838	20.556	22.46	-0.019886					181	94	3	0	0	0	0.80959	2	529	529;573		15.642	3.9756	1	867930	+		64699	16493	43025	43043	73364;73365	73364					0.07886686385802477
VTKKTAVS	8	Unmodified	_VTKKTAVS_					0	0	0			REV__ENSG00000065154|ENST00000368845|OAT	REV__ENSG00000065154|ENST00000368845|OAT	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	417.25946044921875	2	417.258185	832.501818	0.52563	0.00021932	-0.071237	-2.9724E-05	0.45439	0.0001896	417.2580621570988	22.515	2.686	21.904	21.633	24.319	-0.6107					140	63	3	0	0	0	0.7961	1	902	902		17.365	0	1	2260100	+		64700	16493	43025	43043	73366	73366					0.07886686385802477
VTKNVSKPR	9	Unmodified	_VTKNVSKPR_					0	0	0		ENSG00000130255|ENST00000347512|RPL36	ENSG00000130255|ENST00000347512|RPL36	ENSG00000130255|ENST00000347512|RPL36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.81396484375	2	514.81419	1027.61383	1.0494	0.00054024	-0.21479	-0.00011058	0.83459	0.00042966	514.8139705272351	15.632	0.4449	15.71	15.527	15.972	0.077959					36	19	3	0	0	0	0.6107	2	44	44;53		46.457	7.2039	1	26106			64701	3628	43026	43044	73367;73368	73367					0.1011254046279646
VTKNVSKPR	9	Unmodified	_VTKNVSKPR_					0	0	0		ENSG00000130255|ENST00000347512|RPL36	ENSG00000130255|ENST00000347512|RPL36	ENSG00000130255|ENST00000347512|RPL36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	514.8154296875	2	514.81419	1027.61383	-0.043645	-2.2469E-05	1.4727	0.00075818	1.4291	0.00073571	514.8145286099342	16.425	0.19236	16.345	16.241	16.434	-0.080017					17	6	3	0	0	0	0.26953	2	110	110;116		67.494	17.574	1	108710			64702	3628	43026	43044	73369;73370	73369					0.1011254046279646
VTKNVSKPR	9	Unmodified	_VTKNVSKPR_					0	0	0		ENSG00000130255|ENST00000347512|RPL36	ENSG00000130255|ENST00000347512|RPL36	ENSG00000130255|ENST00000347512|RPL36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	514.8136596679688	2	514.81419	1027.61383	0.54199	0.00027902	-0.34318	-0.00017667	0.19881	0.00010235	514.8138474448585	16.331	0.19383	16.247	16.174	16.368	-0.083363					19	9	3	0	0	0	0.21553	2	128	128;134		72.243	22.707	1	125030			64703	3628	43026	43044	73371;73372	73371					0.1011254046279646
VTKRLPSSGT	10	Unmodified	_VTKRLPSSGT_					0	0	0		nc|ENSG00000101974|Q8NB49-4|ATP11C;ENST00000460773.5_1_X:138814597-138879340:-|nuORF;chrX:139732525-139737916|22|10.55|0.27|5.3|-|0|ATP11C,ATP11C|1	nc|ENSG00000101974|Q8NB49-4|ATP11C	nc|ENSG00000101974|Q8NB49-4|ATP11C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.303466796875	2	523.303655	1044.59276	-0.1734	-9.0741E-05	-0.15994	-8.3699E-05	-0.33334	-0.00017444	523.3034783791056	88.433	5.6961	88.64	87.075	92.771	0.2073					490	135	6	0	0	0	0.86348	2	8754	8754;8800		31.53	1.2121	1	13808000			64704	14823	43027	43045	73373;73374	73373					0.07224530363305348
VTKRPPPKWV	10	Unmodified	_VTKRPPPKWV_					0	0	0		nc|ENSG00000124222|O14662-3|STX16;ENST00000468590.1_1_20:57227170-57245628:+|nuORF;nc|ENSG00000124222|O14662-6|STX16;nc|ENSG00000124222|O14662-2|STX16;nc|ENSG00000124222|O14662-4|STX16;nc|ENSG00000124222|O14662-5|STX16;ENSG00000124222|ENST00000371141|STX16	nc|ENSG00000124222|O14662-3|STX16	nc|ENSG00000124222|O14662-3|STX16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.24676513671875	3	403.248514	1206.72371	-0.96192	-0.00038789	-3.0086	-0.0012132	-3.9706	-0.0016011	403.2472281244655	104.88	3.5231	104.88	103.72	107.24	0					230	83	5	0	0	0	0.86471	1	10870	10870		22.562	2.9347	1	5402700			64705	3320	43028	43046	73375	73375					0.12861965801948827
VTKTKGSDGY	10	Unmodified	_VTKTKGSDGY_					0	0	0			REV__nc|ENSG00000101746|O94818-2|NOL4	REV__nc|ENSG00000101746|O94818-2|NOL4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.3115234375	2	528.272021	1054.52949	0.16505	8.7189E-05	3.4335	0.0018138	3.5985	0.001901	528.2735872900702	80.215	0.59194	80.742	80.443	81.035	0.52676					22	13	2	0	0	0	0.37624	1	9223	9223		14.865	0	1	169130	+		64706	17299	43029	43047	73376	73376					0.0044054485538254085
VTKTQILC	8	Unmodified	_VTKTQILC_					0	0	0		ENSG00000108771|ENST00000251642|DHX58;ENST00000586522.5_1_17:40255624-40263910:-|nuORF;ENST00000590637.1_1_17:40257054-40259850:-|nuORF	ENSG00000108771|ENST00000251642|DHX58	ENSG00000108771|ENST00000251642|DHX58	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.258056640625	2	453.259871	904.505189	-0.75087	-0.00034034	-3.3219	-0.0015057	-4.0728	-0.001846	453.2580610307469	46.126	0.5201	47.021	46.767	47.287	0.89542					27	12	3	0	0	0	0.93786	1	4337	4337		53.351	2.016	1	1491400			64707	2428	43030	43048	73377	73377					0.04911613168144413
VTKTRPKTG	9	Unmodified	_VTKTRPKTG_					0	0	0			REV__nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	REV__nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.30096435546875	2	494.300916	986.587279	-0.0748	-3.6974E-05	-0.3174	-0.00015689	-0.3922	-0.00019387	494.30075143902303	97.483	4.0876	97.54	96.775	100.86	0.056839					393	94	6	0	0	0	0.77696	1	10487	10487		31.53	1.0262	1	54076000	+		64708	17088	43031	43049	73378	73378					0.09344851571472645
VTKTTALA	8	Unmodified	_VTKTTALA_					0	0	0		ENST00000459716.6_1_13:33002185-33002344:-|nuORF	ENST00000459716.6_1_13:33002185-33002344:-|nuORF	ENST00000459716.6_1_13:33002185-33002344:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	402.7423400878906	2	402.744911	803.475269	-1.9087	-0.00076874	-4.406	-0.0017745	-6.3148	-0.0025432	402.7429753530759	38.078	1.2301	38.078	37.711	38.941	0					76	29	4	0	0	0	0.81548	1	2343	2343		20.482	4.0087	1	611140			64709	11992	43032	43050	73379	73379					0.06566997494451243
VTLARWPGL	9	Unmodified	_VTLARWPGL_					0	0	0			REV__ENST00000340305.9_1_1:9662757-9662931:+|nuORF	REV__ENST00000340305.9_1_1:9662757-9662931:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8004150390625	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.525	1	43.531	43.031	44.031	0.0057487								0	0	0	0.29103	1	3006	3006		40.573	1.7665	1		+		64710	25242	43033	43051	73380	73380					0.08122056922411502
VTLEGLHPEP	10	Unmodified	_VTLEGLHPEP_					0	0	0			REV__nc|ENSG00000168477|P22105-1|TNXB	REV__nc|ENSG00000168477|P22105-1|TNXB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3970336914062	2	546.290214	1090.56587	1.585	0.00086588	2.6177	0.00143	4.2027	0.0022959	546.2916659737118	99.274	0.23032	99.637	99.485	99.715	0.36292					6	5	2	0	0	0	0.37624	1	12033	12033		25.574	0	1	43355	+		64711	21491	43034	43052	73381	73381					0.024214217521148385
VTLEKPNNS	9	Unmodified	_VTLEKPNNS_					0	0	0			REV__ENSG00000136169|ENST00000611815|SETDB2	REV__ENSG00000136169|ENST00000611815|SETDB2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.2754821777344	2	501.266739	1000.51892	-1.027	-0.00051478	-2.5128	-0.0012596	-3.5397	-0.0017743	501.2647181972189	43.945	0.32597	44.395	44.239	44.565	0.45025					14	7	3	0	0	0	0.20789	1	4024	4024		27.882	13.017	1	205890	+		64712	19292	43035	43053	73382	73382					0.01868562200957058
VTLGIGAGRSA	11	Unmodified	_VTLGIGAGRSA_					0	0	0		ENST00000338302.7_1_1:156876157-156878457:+|nuORF	ENST00000338302.7_1_1:156876157-156878457:+|nuORF	ENST00000338302.7_1_1:156876157-156878457:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2902526855469	2	501.290548	1000.56654	-0.50311	-0.0002522	0.25574	0.0001282	-0.24737	-0.000124	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.60058	1	8762	8762		44.377	6.5657	1	10459000			64713	10202	43036	43054	73383	73383					0.06628261191804086
VTLGNIFEKL	10	Unmodified	_VTLGNIFEKL_					0	0	0		ENSG00000204518|ENST00000376221|AADACL4	ENSG00000204518|ENST00000376221|AADACL4	ENSG00000204518|ENST00000376221|AADACL4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3299560546875	2	567.331882	1132.64921	-1.3957	-0.00079181	-2.2919	-0.0013002	-3.6875	-0.0020921	567.3304780930565	92.313	7.3514	92.499	91.283	98.635	0.18582					553	173	6	0	0	0	0.86698	1	9213	9213		28.081	1.3886	1	17338000			64714	8450	43037	43055	73384	73384					0.0881915819995811
VTLGRGCCCFW	11	Unmodified	_VTLGRGCCCFW_					0	0	0		ENST00000538503.5_1_12:121881458-121882696:-|nuORF	ENST00000538503.5_1_12:121881458-121882696:-|nuORF	ENST00000538503.5_1_12:121881458-121882696:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	622.7705078125	2	622.772296	1243.53004	0.68717	0.00042795	-2.8415	-0.0017696	-2.1544	-0.0013417	622.7702493098452	80.312	1.3809	80.839	80.105	81.486	0.52676					77	32	3	0	0	0	0.45916	1	9224	9224		54.776	3.5836	1	854650			64715	13467	43038	43056	73385	73385					-0.08198398292438469
VTLHFRLP	8	Unmodified	_VTLHFRLP_					0	0	0		ENST00000466883.5_1_7:65439694-65439883:-|nuORF	ENST00000466883.5_1_7:65439694-65439883:-|nuORF	ENST00000466883.5_1_7:65439694-65439883:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79632568359375	2	491.795269	981.575986	0.30701	0.00015099	0.61103	0.0003005	0.91804	0.00045149	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.8347	1	3562	3562		23.042	0	1	3201400			64716	12141	43039	43057	73386	73386					0.08446074267999393
VTLKKDVDN	9	Unmodified	_VTLKKDVDN_					0	0	0		ENSG00000172867|ENST00000309680|KRT2;CON__P35908v2;CON__P35908	ENSG00000172867|ENST00000309680|KRT2	ENSG00000172867|ENST00000309680|KRT2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.2332763671875	2	516.290214	1030.56587	0.080189	4.1401E-05	0.31727	0.00016381	0.39746	0.00020521	516.2903153592583	56.356	0.51604	56.753	56.556	57.072	0.39672					19	11	2	0	0	0	0.20789	1	5810	5810		37.812	15.852	1	541690		+	64717	599	43040	43058	73387	73387					0.051814217520814054
VTLPAPTAL	9	Unmodified	_VTLPAPTAL_					0	0	0			REV__ENSG00000070444|ENST00000174618|MNT	REV__ENSG00000070444|ENST00000174618|MNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7680969238281	2	441.768386	881.522219	-0.15332	-6.7733E-05	-0.82572	-0.00036478	-0.97905	-0.00043251	441.76810949175115	107.35	0.84094	107.31	106.9	107.75	-0.034409					58	19	4	0	0	0	0.74721	1	11713	11713		37.159	8.0096	1	1492500	+		64718	16603	43041	43059	73388	73388					0.07671857045602337
VTLPNKSF	8	Unmodified	_VTLPNKSF_					0	0	0		ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.2574462890625	2	453.258185	904.501818	-1.4841	-0.00067267	0.98693	0.00044734	-0.49714	-0.00022533	453.2583618788476	46.319	0.48469	46.791	46.536	47.021	0.47139					25	11	3	0	0	0	0.93786	1	4355	4355		53.351	1.0523	1	1651800			64719	1166	43042	43060	73389	73389					0.04574686385808491
VTLSLPHRP	9	Unmodified	_VTLSLPHRP_					0	0	0		ENST00000562272.5_1_16:23691188-23701381:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.30322265625	2	510.303458	1018.59236	0.30458	0.00015543	-0.74879	-0.00038211	-0.44421	-0.00022668	510.30290885562005	51.133	0.45562	51.568	51.285	51.74	0.43505					19	10	2	0	0	0	0.28163	1	5054	5054		66.429	2.222	1	479880			64720	13846	43043	43061	73390	73390					0.08381155434096854
VTLSLPHRP	9	Unmodified	_VTLSLPHRP_					0	0	0		ENST00000562272.5_1_16:23691188-23701381:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	510.303458	1018.59236	1.5515	0.00079174	-3.2679	-0.0016676	-1.7164	-0.0008759	510.3021357382702	50.913	0.69561	51.665	51.284	51.98	0.75174	0.048296	-0.0021384	NaN	66.429	31	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	515190			64721	13846	43043	43061							0.08381155434096854
VTLTFISA	8	Unmodified	_VTLTFISA_					0	0	0			REV__ENSG00000181408|ENST00000313135|UTS2R	REV__ENSG00000181408|ENST00000313135|UTS2R	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.2459411621094	2	426.247286	850.48002	-1.843	-0.00078557	-1.0037	-0.00042784	-2.8467	-0.0012134	426.2467741737408	87.495	4.0009	87.665	85.686	89.687	0.16922					180	93	4	0	0	0	0.86288	1	8583	8583		26.796	0	1	3180100	+		64722	22457	43044	43062	73391	73391					0.048798816372254805
VTLTHRSN	8	Unmodified	_VTLTHRSN_					0	0	0			REV__nc|ENSG00000050767|Q86Y22-2|COL23A1	REV__nc|ENSG00000050767|Q86Y22-2|COL23A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	464.25360107421875	2	464.253966	926.493378	0.61869	0.00028723	-0.39602	-0.00018385	0.22267	0.00010337	464.253659260461	83.924	4.921	84.072	82.674	87.595	0.14793					332	114	5	0	0	0	0.88185	1	8399	8399		32.812	1.2826	1	1482000	+		64723	29690	43045	43063	73392	73392					0.027191324691784757
VTLTLRNLK	9	Unmodified	_VTLTLRNLK_					0	0	0		nc|ENSG00000177663|Q96F46-2|IL17RA;ENSG00000177663|ENST00000319363|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.339599609375	2	529.340041	1056.66553	1.311	0.00069395	-0.8934	-0.00047291	0.41757	0.00022103	529.3394337979922	21.186	0.47571	20.727	20.501	20.976	-0.4591					20	10	3	0	0	0	0.7932	1	755	755		17.365	0	1	77503			64724	7152	43046	43064	73393	73393					0.13946284156691036
VTLTLRNLK	9	Unmodified	_VTLTLRNLK_					0	0	0		nc|ENSG00000177663|Q96F46-2|IL17RA;ENSG00000177663|ENST00000319363|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	529.340041	1056.66553	0.1099	5.8175E-05	5.7272	0.0030316	5.8371	0.0030898	529.3424850344733	20.641	0.1252	20.717	20.637	20.762	0.075848	-0.029925	0.0055131	NaN	17.365	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38070			64725	7152	43046	43064							0.13946284156691036
VTLTLRNLK	9	Unmodified	_VTLTLRNLK_					0	0	0		nc|ENSG00000177663|Q96F46-2|IL17RA;ENSG00000177663|ENST00000319363|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	529.340041	1056.66553	0.089595	4.7426E-05	-0.078933	-4.1782E-05	0.010662	5.6439E-06	529.339919235676	21.426	0.59333	20.798	20.55	21.144	-0.62835	0.050452	-0.00063379	NaN	17.365	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93309			64726	7152	43046	43064							0.13946284156691036
VTLVRIADL	9	Unmodified	_VTLVRIADL_					0	0	0		ENST00000529624.5_3_15:28877823-28916776:+|nuORF	ENST00000529624.5_3_15:28877823-28916776:+|nuORF	ENST00000529624.5_3_15:28877823-28916776:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	500.3133850097656	2	500.313492	998.612431	0.60375	0.00030207	-0.30238	-0.00015128	0.30138	0.00015078	500.3130487867207	78.718	0.69824	78.857	78.489	79.187	0.13883					40	18	3	0	0	0	0.36616	2	7439	7439;7449		60.118	7.1816	1	179210			64727	13330	43047	43065	73394;73395	73394					0.11306906374034043
VTLVRIADL	9	Unmodified	_VTLVRIADL_					0	0	0		ENST00000529624.5_3_15:28877823-28916776:+|nuORF	ENST00000529624.5_3_15:28877823-28916776:+|nuORF	ENST00000529624.5_3_15:28877823-28916776:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	500.3131103515625	2	500.313492	998.612431	-1.2878	-0.00064428	1.1774	0.00058906	-0.11036	-5.5215E-05	500.31397417451893	78.74	0.56955	78.834	78.567	79.136	0.0942					38	16	3	0	0	0	0.58668	1	7388	7388		47.657	5.2612	1	206800			64728	13330	43047	43065	73396	73396					0.11306906374034043
VTLVSPLPG	9	Unmodified	_VTLVSPLPG_					0	0	0		ENST00000434206.1_1_3:43020805-43095327:+|nuORF;ENSG00000144649|ENST00000430121|GASK1A	ENST00000434206.1_1_3:43020805-43095327:+|nuORF	ENST00000434206.1_1_3:43020805-43095327:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7683410644531	2	441.768386	881.522219	-1.395	-0.00061625	0.77723	0.00034336	-0.61772	-0.00027289	441.7686373014596	107.04	1.3051	107.18	106.55	107.86	0.13866					69	31	3	0	0	0	0.74721	1	11480	11480		37.159	3.6435	1	2385100			64729	4724	43048	43066	73397	73397					0.07671857045613706
VTPAIVLAV	9	Unmodified	_VTPAIVLAV_					0	0	0			REV__nc|ENSG00000198739|Q86VH5-2|LRRTM3	REV__nc|ENSG00000198739|Q86VH5-2|LRRTM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7879638671875	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.7932	1	3584	3584		13.775	0	1	325400	+		64730	23370	43049	43067	73398	73398					0.11308733942325944
VTPAIVLAV	9	Unmodified	_VTPAIVLAV_					0	0	0			REV__nc|ENSG00000198739|Q86VH5-2|LRRTM3	REV__nc|ENSG00000198739|Q86VH5-2|LRRTM3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.7864685058594	2	441.786579	881.558604	-1.5024	-0.00066375	4.2248	0.0018665	2.7224	0.0012027	441.7882704401769	41.749	3.1564	41.753	40.935	44.091	0.0043983					246	87	5	0	0	0	0.7932	1	2655	2655		25.45	6.0902	1	10128000	+		64731	23370	43049	43067	73399	73399					0.11308733942325944
VTPEIREKLIR	11	Unmodified	_VTPEIREKLIR_					0	0	0		ENST00000527306.1_1_8:42752256-42852891:+|nuORF;ENSG00000168172|ENST00000307602|HOOK3	ENST00000527306.1_1_8:42752256-42852891:+|nuORF	ENST00000527306.1_1_8:42752256-42852891:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	452.2768249511719	3	451.945271	1352.81398	-1.6541	-0.00074756	-2.5453	-0.0011503	-4.1994	-0.0018979	451.9440160243961	55.781	1.879	55.781	54.449	56.328	0					145	63	4	0	0	0	0.79716	1	4637	4637		11.932	0.29645	1	430100			64732	6381	43050	43068	73400	73400					0.15168970339755106
VTPGNELGPV	10	Unmodified	_VTPGNELGPV_					0	0	0			REV__ENSG00000232070|ENST00000556585|TMEM253	REV__ENSG00000232070|ENST00000556585|TMEM253	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7640380859375	2	491.763832	981.513111	0.46029	0.00022635	-0.83305	-0.00040966	-0.37277	-0.00018331	491.7633943538634	63.689	0.55103	63.812	63.556	64.107	0.12252					40	22	2	0	0	0	0.86587	1	5604	5604		29.17	0.020503	1	116970	+		64733	23769	43051	43069	73401	73401					0.02161463689287757
VTPKRPQEPSR	11	Unmodified	_VTPKRPQEPSR_					0	0	0			REV__ENST00000550078.2_2_1:203764956-203765340:+|nuORF	REV__ENST00000550078.2_2_1:203764956-203765340:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	647.8651733398438	2	647.864943	1293.71533	-1.1412	-0.00073931	1.841	0.0011927	0.69984	0.0004534	647.8658405017543	113.32	2.2055	113.27	113.24	115.45	-0.044777					113	49	3	0	0	0	0.6493	1	12146	12146		38.754	8.4359	1	4362100	+		64734	28591	43052	43070	73402	73402					0.08022367094690708
VTPKRPTKARA	11	Unmodified	_VTPKRPTKARA_					0	0	0			REV__nc|ENSG00000137807|Q02241-2|KIF23	REV__nc|ENSG00000137807|Q02241-2|KIF23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.879638671875	2	612.880396	1223.74624	0.28933	0.00017733	-1.62	-0.00099287	-1.3307	-0.00081554	612.8792234651027	104.57	3.8669	104.61	104	107.87	0.039864					305	91	6	0	0	0	0.62614	1	11459	11459		41.427	5.8083	1	50996000	+		64735	19408	43053	43071	73403	73403					0.14331565199586294
VTPPITYWTVS	11	Unmodified	_VTPPITYWTVS_					0	0	0			REV__nc|ENSG00000196277|Q14831-2|GRM7	REV__nc|ENSG00000196277|Q14831-2|GRM7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.8941650390625	3	421.892173	1262.65469	0.71783	0.00030285	4.4345	0.0018709	5.1523	0.0021737	421.8939949290353	22.931	0.31027	22.32	22.12	22.43	-0.6107					13	7	2	0	0	0	0.68431	1	977	977		34.087	8.0231	1	87262	+		64736	30128	43054	43072	73404	73404					0.03386836991739983
VTPSILLAL	9	Unmodified	_VTPSILLAL_					0	0	0		ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.8013000488281	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.7932	1	3336	3336		19.36	1.0356	1	210360			64737	1052	43055	43073	73405	73405					0.11905003113804469
VTPSILLAL	9	Unmodified	_VTPSILLAL_					0	0	0		ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.7987365722656	2	463.799686	925.584819	-0.080206	-3.7199E-05	1.9522	0.00090541	1.8719	0.00086821	463.80040731335265	41.41	1.3196	41.365	40.954	42.273	-0.045467					80	38	3	0	0	0	0.7932	1	2795	2795		26.796	2.5934	1	417210			64738	1052	43055	43073	73406	73406					0.11905003113804469
VTPSLLLLG	9	Unmodified	_VTPSLLLLG_					0	0	0		ENST00000309502.7_1_1:203135914-203136022:+|nuORF	ENST00000309502.7_1_1:203135914-203136022:+|nuORF	ENST00000309502.7_1_1:203135914-203136022:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.7932434082031	2	456.791861	911.569169	0.077491	3.5397E-05	2.8416	0.001298	2.9191	0.0013334	456.79305971511855	36.37	2.269	36.31	35.066	37.335	-0.060333					201	67	4	0	0	0	0.58151	1	1985	1985		47.916	0	1	3452400			64739	9898	43056	43074	73407	73407					0.1098471659677216
VTPSVSKNRE	10	Unmodified	_VTPSVSKNRE_					0	0	0			REV__nc|ENSG00000204217|Q13873-2|BMPR2	REV__nc|ENSG00000204217|Q13873-2|BMPR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.802978515625	2	558.80402	1115.59349	0.49267	0.00027531	-0.90766	-0.0005072	-0.41499	-0.0002319	558.803379087328	49.48	0.75183	49.484	49.147	49.899	0.0035973					32	16	3	0	0	0	0.51302	1	4170	4170		54.776	1.4249	1	326250	+		64740	23470	43057	43075	73408	73408					0.04031325012351772
VTPSVSKNRE	10	Unmodified	_VTPSVSKNRE_					0	0	0			REV__nc|ENSG00000204217|Q13873-2|BMPR2	REV__nc|ENSG00000204217|Q13873-2|BMPR2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	558.80402	1115.59349	0.49267	0.00027531	-0.90766	-0.0005072	-0.41499	-0.0002319	558.803379087328	49.48	0.75183	49.484	49.147	49.899	0.0035973	0.048114	-0.00096178	NaN	54.776	32	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	326250	+		64741	23470	43057	43075							0.04031325012351772
VTPVGVRVF	9	Unmodified	_VTPVGVRVF_					0	0	0			REV__ENST00000543879.6_1_15:35166876-35196659:-|nuORF	REV__ENST00000543879.6_1_15:35166876-35196659:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.2925109863281	2	487.295102	972.575651	-0.70314	-0.00034264	-3.2434	-0.0015805	-3.9466	-0.0019231	487.29338906256316	90.865	2.6767	91.083	90.551	93.228	0.21736					133	64	3	0	0	0	0.7932	1	9109	9109		21.96	0	1	1731200	+		64742	16242	43058	43076	73409	73409					0.0882665454812468
VTQGKRPLR	9	Unmodified	_VTQGKRPLR_					0	0	0		ENSG00000101310|ENST00000650089|SEC23B	ENSG00000101310|ENST00000650089|SEC23B	ENSG00000101310|ENST00000650089|SEC23B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.263427734375	2	527.827632	1053.64071	0.032251	1.7023E-05	-1.19	-0.00062814	-1.1578	-0.00061111	528.3278809931792	55.319	1.5674	55.346	54.543	56.111	0.027142					53	41	2	0	0	0	0.20789	1	5046	5046		15.642	4.1308	1	171040			64743	1928	43059	43077	73410	73410					0.11603649073981614
VTQGKRPLR	9	Unmodified	_VTQGKRPLR_					0	0	0		ENSG00000101310|ENST00000650089|SEC23B	ENSG00000101310|ENST00000650089|SEC23B	ENSG00000101310|ENST00000650089|SEC23B	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	527.827632	1053.64071	0.41895	0.00022113	-1.3255	-0.00069964	-0.90655	-0.0004785	528.3277425301544	55.037	1.035	55.129	54.778	55.813	0.091167	-0.034828	-0.00037368	NaN	15.642	38	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	275760			64744	1928	43059	43077							0.11603649073981614
VTQGKRPLR	9	Unmodified	_VTQGKRPLR_					0	0	0		ENSG00000101310|ENST00000650089|SEC23B	ENSG00000101310|ENST00000650089|SEC23B	ENSG00000101310|ENST00000650089|SEC23B	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	527.827632	1053.64071	-0.35902	-0.0001895	-0.75684	-0.00039948	-1.1159	-0.00058898	528.3281576907516	55.065	1.5942	55.015	54.323	55.917	-0.049271	-0.14802	0.00022664	NaN	15.642	73	51	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272530			64745	1928	43059	43077							0.11603649073981614
VTRLPKLEP	9	Unmodified	_VTRLPKLEP_					0	0	0		nc|ENSG00000169379|Q3SXY8-2|ARL13B;nc|ENSG00000169379|Q3SXY8-3|ARL13B;ENSG00000169379|ENST00000394222|ARL13B	nc|ENSG00000169379|Q3SXY8-2|ARL13B	nc|ENSG00000169379|Q3SXY8-2|ARL13B	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.8267822265625	2	526.826766	1051.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.673	1	75.806	75.306	76.306	0.13325								0	0	0	0.3465	1	7051	7051		15.642	0	1				64746	6492	43060	43078	73411	73411					0.11522595265341806
VTRPNATI	8	Unmodified	_VTRPNATI_					0	0	0			REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	436.2507019042969	2	436.253434	870.492316	2.7214	0.0011872	0.69776	0.0003044	3.4192	0.0014916	436.2536376780216	112.2	0.62576	112.17	112.07	112.69	-0.025414					29	13	3	0	0	0	0.91977	1	12394	12394		45.952	0	1	683070	+		64747	20516	43061	43079	73412	73412					0.051889181002820806
VTRPNATI	8	Unmodified	_VTRPNATI_					0	0	0			REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	436.253434	870.492316	2.7214	0.0011872	0.69776	0.0003044	3.4192	0.0014916	436.2536376780216	112.2	0.62576	112.17	112.07	112.69	-0.025414	0.12959	-0.0010814	NaN	45.952	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	683070	+		64748	20516	43061	43079							0.051889181002820806
VTRPNATI	8	Unmodified	_VTRPNATI_					0	0	0			REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	436.253434	870.492316	0.73698	0.00032151	2.4525	0.0010699	3.1895	0.0013914	436.25453302910074	111.84	0.49524	111.91	111.59	112.09	0.069542	-0.12959	0.00044966	NaN	45.952	26	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217290	+		64749	20516	43061	43079							0.051889181002820806
VTRQIRAS	8	Unmodified	_VTRQIRAS_					0	0	0			REV__ENSG00000138161|ENST00000392790|CUZD1	REV__ENSG00000138161|ENST00000392790|CUZD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7774353027344	2	465.777608	929.540663	0.60386	0.00028126	-0.75167	-0.00035011	-0.14781	-6.8848E-05	465.77716612244365	81.626	5.8546	81.77	80.459	86.313	0.14352					336	137	4	0	0	0	0.91977	1	7725	7725		45.952	0	1	1082300	+		64750	19445	43062	43080	73413	73413					0.07307411740168845
VTRREMTRHA	10	Unmodified	_VTRREMTRHA_					0	0	0		ENSG00000215421|ENST00000299687|ZNF407;nc|ENSG00000215421|Q9C0G0-3|ZNF407;nc|ENSG00000215421|Q9C0G0-2|ZNF407	ENSG00000215421|ENST00000299687|ZNF407	ENSG00000215421|ENST00000299687|ZNF407	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.56005859375	3	419.559534	1255.65677	-0.01436	-6.0248E-06	2.4764	0.001039	2.4621	0.001033	419.56046996742987	32.876	0.80484	32.879	32.585	33.39	0.0030785					38	18	3	0	0	0	0.71918	1	1884	1884		43.651	3.7776	1	94751			64751	8652	43063	43081	73414	73414					0.039169872485672386
VTRRPLHLTGL	11	Unmodified	_VTRRPLHLTGL_					0	0	0			REV__ENSG00000185049|ENST00000382882|NELFA	REV__ENSG00000185049|ENST00000382882|NELFA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.59478759765625	3	421.594573	1261.76189	-0.40523	-0.00017084	0.87978	0.00037091	0.47455	0.00020007	421.59486821192996	16.058	0.2585	15.978	15.889	16.148	-0.080018					21	10	3	0	0	0	0.76251	1	74	74		19.263	0	1	97704	+		64752	22734	43064	43082	73415	73415					0.14147851716643345
VTRTSLSQLR	10	Unmodified	_VTRTSLSQLR_					0	0	0		ENST00000358744.3_1_19:38077586-38085658:-|nuORF	ENST00000358744.3_1_19:38077586-38085658:-|nuORF	ENST00000358744.3_1_19:38077586-38085658:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.84033203125	2	580.840936	1159.66732	-0.43283	-0.00025141	-0.24886	-0.00014455	-0.68169	-0.00039595	580.8405993802119	69.859	0.92783	69.822	69.57	70.498	-0.036957					124	48	3	0	0	0	0.76096	1	6755	6755		41.427	2.1738	1	18374000			64753	10416	43065	43083	73416	73416					0.0938729317463185
VTSAHLQF	8	Unmodified	_VTSAHLQF_					0	0	0			REV__ENST00000368854.7_1_10:125528237-125699754:-|nuORF	REV__ENST00000368854.7_1_10:125528237-125699754:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7392272949219	2	451.74016	901.465767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.428	1	30.453	29.953	30.953	0.025013								0	0	0	0.30811	1	1575	1575		45.952	0	1		+		64754	18470	43066	43084	73417	73417					0.011092292089415423
VTSISRSLPAR	11	Unmodified	_VTSISRSLPAR_					0	0	0			REV__ENSG00000136158|ENST00000377104|SPRY2	REV__ENSG00000136158|ENST00000377104|SPRY2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	594.808837890625	2	593.848761	1185.68297	0.19241	0.00011426	-0.051482	-3.0573E-05	0.14093	8.3691E-05	593.8482768446529	17.477	0.27023	16.867	16.659	16.929	-0.6107					8	5	2	0	0	0	0.17552	1	251	251		23.523	6.1577	1	32465	+		64755	19291	43067	43085	73418	73418					0.09755579691704952
VTSISRSLPAR	11	Unmodified	_VTSISRSLPAR_					0	0	0			REV__ENSG00000136158|ENST00000377104|SPRY2	REV__ENSG00000136158|ENST00000377104|SPRY2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	593.848761	1185.68297	0.4616	0.00027412	-0.6997	-0.00041551	-0.2381	-0.00014139	593.848002195779	17.357	0.22984	16.874	16.761	16.991	-0.48256	0.0038767	-0.00058793	NaN	23.523	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24068	+		64756	19291	43067	43085							0.09755579691704952
VTSKNGGIYLL	11	Unmodified	_VTSKNGGIYLL_					0	0	0		ENST00000530534.1_1_11:71184711-71189599:+|nuORF;ENSG00000172890|ENST00000319023|NADSYN1	ENST00000530534.1_1_11:71184711-71189599:+|nuORF	ENST00000530534.1_1_11:71184711-71189599:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	583.3348388671875	2	582.834788	1163.65502	0.7163	0.00041749	-4.2997	-0.002506	-3.5834	-0.0020885	582.8322944715994	93.943	3.3707	94.171	93.279	96.65	0.22863					214	80	3	0	0	0	0.7144	1	9566	9566		29.17	0	1	862210			64757	6803	43068	43086	73419	73419					0.07974256711622729
VTSKSNLS	8	Unmodified	_VTSKSNLS_					0	0	0		nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2;ENSG00000143882|ENST00000272238|ATP6V1C2	nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	418.2293701171875	2	418.229625	834.444697	0.38737	0.00016201	-0.14671	-6.1358E-05	0.24066	0.00010065	418.229430027419	27.081	0.7795	27.121	26.701	27.48	0.040834					31	25	2	0	0	0	0.88944	1	1202	1202		57.811	9.8957	1	37435			64758	4673	43069	43087	73420	73420					0.020852191094377304
VTSLSLDAP	9	Unmodified	_VTSLSLDAP_					0	0	0		ENSG00000070601|ENST00000377765|FRMPD1	ENSG00000070601|ENST00000377765|FRMPD1	ENSG00000070601|ENST00000377765|FRMPD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7454528808594	2	451.745108	901.475663	-0.61831	-0.00027932	2.3255	0.0010506	1.7072	0.00077123	451.7459480558959	34.844	1.0293	34.787	34.355	35.384	-0.056385					46	23	3	0	0	0	0.5393	1	2223	2223		50.025	2.1089	1	301340			64759	1246	43070	43088	73421	73421					0.02098372423654382
VTTDGTPLV	9	Unmodified	_VTTDGTPLV_					0	0	0		nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7455749511719	2	451.745108	901.475663	-0.61831	-0.00027932	2.3255	0.0010506	1.7072	0.00077123	451.7459480558959	34.844	1.0293	34.787	34.355	35.384	-0.056385					46	23	3	0	0	0	0.5393	1	2212	2212		50.025	0	1	301340			64760	14976	43071	43089	73422	73422					0.020983724236771195
VTTDGTPLV	9	Unmodified	_VTTDGTPLV_					0	0	0		nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.74603271484375	2	451.745108	901.475663	-1.3354	-0.00060327	3.1446	0.0014206	1.8092	0.00081728	451.74648679752744	34.552	0.77399	34.59	34.166	34.94	0.038643					54	31	2	0	0	0	0.58151	1	1755	1755		47.916	1.9636	1	190450			64761	14976	43071	43089	73423	73423					0.020983724236771195
VTTDGTPLV	9	Unmodified	_VTTDGTPLV_					0	0	0		nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.7453918457031	2	451.745108	901.475663	0.13129	5.9312E-05	1.6708	0.00075478	1.8021	0.00081409	451.7457782278177	34.466	0.62606	34.41	34.164	34.79	-0.055149					45	25	2	0	0	0	0.7932	1	1753	1753		26.796	0	1	170080			64762	14976	43071	43089	73424	73424					0.020983724236771195
VTTLAGLPE	9	Unmodified	_VTTLAGLPE_					0	0	0		ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A	ENSG00000042781|ENST00000307340|USH2A	ENSG00000042781|ENST00000307340|USH2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.7542419433594	2	450.755475	899.496398	0.64847	0.0002923	-3.528	-0.0015903	-2.8795	-0.001298	450.75374359065125	79.903	2.1546	79.957	78.088	80.243	0.053841					110	68	3	0	0	0	0.74721	1	7899	7899		37.159	5.2042	1	162850			64763	938	43072	43090	73425	73425					0.042629628033296285
VTTLLSHN	8	Unmodified	_VTTLLSHN_					0	0	0			REV__nc|ENSG00000116455|Q9BQA1-2|WDR77	REV__nc|ENSG00000116455|Q9BQA1-2|WDR77	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.74481201171875	2	442.745442	883.476331	-0.84967	-0.00037619	-0.44682	-0.00019783	-1.2965	-0.00057401	442.74508565704974	91.361	1.8975	91.832	90.855	92.753	0.47068					98	45	4	0	0	0	0.92457	1	10870	10870		47.916	7.343	1	3563500	+		64764	18199	43073	43091	73426	73426					0.029932118633723803
VTTLRVPVF	9	Unmodified	_VTTLRVPVF_					0	0	0		ENSG00000221914|ENST00000380737|PPP2R2A;nc|ENSG00000221914|P63151-2|PPP2R2A	ENSG00000221914|ENST00000380737|PPP2R2A	ENSG00000221914|ENST00000380737|PPP2R2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	516.3137817382812	2	516.316035	1030.61752	-0.68072	-0.00035146	-3.5737	-0.0018451	-4.2544	-0.0021966	516.3141258949598	99.495	3.323	99.495	98.89	102.21	0					335	79	6	0	0	0	0.78983	1	10124	10124		27.882	0	1	39641000			64765	8682	43074	43092	73427	73427					0.10343210236646883
VTTLRVPVF	9	Unmodified	_VTTLRVPVF_					0	0	0		ENSG00000221914|ENST00000380737|PPP2R2A;nc|ENSG00000221914|P63151-2|PPP2R2A	ENSG00000221914|ENST00000380737|PPP2R2A	ENSG00000221914|ENST00000380737|PPP2R2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3140258789062	2	516.316035	1030.61752	-1.5618	-0.0008064	-2.7724	-0.0014314	-4.3342	-0.0022378	516.3146122462072	99.113	3.4786	99.299	98.545	102.02	0.18582					354	82	6	0	0	0	0.76255	3	10225	10225;10249;10593		35.618	1.2826	1	66055000			64766	8682	43074	43092	73428;73429;73430	73428					0.10343210236646883
VTTMPAKQI	9	Unmodified	_VTTMPAKQI_					0	0	0			REV__nc|ENSG00000003096|Q9P2N7-5|KLHL13	REV__nc|ENSG00000003096|Q9P2N7-5|KLHL13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.7800598144531	2	494.778428	987.542302	1.0619	0.0005254	2.8604	0.0014153	3.9223	0.0019407	494.77980810831224	86.462	4.1995	86.389	85.062	89.262	-0.073769					181	98	2	0	0	0	0.78058	1	8960	8960		30.504	0.18592	1	657500	+		64767	29666	43075	43093	73431	73431					0.0480328471392113
VTTPKLLP	8	Unmodified	_VTTPKLLP_					0	0	0			REV__ENST00000502271.5_1_5:53180101-53180530:-|nuORF	REV__ENST00000502271.5_1_5:53180101-53180530:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.77947998046875	2	434.778754	867.542954	0.023581	1.0252E-05	2.6379	0.0011469	2.6615	0.0011571	434.7797629333649	48.108	2.6391	48.098	47.574	50.213	-0.0093269					205	68	4	0	0	0	0.85277	1	4034	4034		25.45	0	1	2315200	+		64768	27816	43076	43094	73432	73432					0.10388447425293634
VTTTGVTAK	9	Unmodified	_VTTTGVTAK_					0	0	0		ENST00000484662.1_1_1:78445136-78445292:+|nuORF	ENST00000484662.1_1_1:78445136-78445292:+|nuORF	ENST00000484662.1_1_1:78445136-78445292:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	439.24761962890625	2	439.2531	876.491647	4.3567	0.0019137	-0.17924	-7.8732E-05	4.1774	0.0018349	439.2524982651933	106.01	0.62086	106.2	105.78	106.4	0.18647					39	20	3	0	0	0	0.77696	1	12969	12969		31.53	1.0262	1	202710			64769	12541	43077	43095	73433	73433					0.04846078660580133
VTTWPPQLF	9	Unmodified	_VTTWPPQLF_					0	0	0			REV__nc|ENSG00000143297|Q96RD9-3|FCRL5	REV__nc|ENSG00000143297|Q96RD9-3|FCRL5	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.7952880859375	2	544.792392	1087.57023	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.28	1	17.357	16.857	17.857	0.07715								0	0	0	0.32469	1	174	174		21.96	1.013	1		+		64770	19787	43078	43096	73434	73434					0.029949309656331025
VTVALVCALL	10	Unmodified	_VTVALVCALL_					0	0	0			REV__ENSG00000173456|ENST00000311413|RNF26	REV__ENSG00000173456|ENST00000311413|RNF26	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29046630859375	2	501.306821	1000.59909	0.68051	0.00034115	1.7895	0.00089708	2.47	0.0012382	501.3066063830208	87.138	0.43324	87.287	86.992	87.425	0.14956					16	9	2	0	0	0	0.37624	1	8617	8617		23.042	0	1	26756	+		64771	21925	43079	43097	73435	73435					0.09881332270435905
VTVASAAGH	9	Unmodified	_VTVASAAGH_					0	0	0		ENST00000502576.5_1_4:88258430-88295551:-|nuORF;ENSG00000198189|ENST00000358290|HSD17B11	ENST00000502576.5_1_4:88258430-88295551:-|nuORF	ENST00000502576.5_1_4:88258430-88295551:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	406.7164001464844	2	406.716685	811.418816	-1.6093	-0.00065452	0.68256	0.00027761	-0.92673	-0.00037692	406.71680117941077	58.725	0.62392	58.725	58.407	59.031	0					47	29	2	0	0	0	0.78058	1	5087	5087		30.504	2.6214	1	53824			64772	8252	43080	43098	73436	73436					0.005563696578064992
VTVEASKPN	9	Unmodified	_VTVEASKPN_					0	0	0		nc|ENSG00000169851|O60245|PCDH7;nc|ENSG00000169851|O60245-2|PCDH7;ENSG00000169851|ENST00000695919|PCDH7	nc|ENSG00000169851|O60245|PCDH7	nc|ENSG00000169851|O60245|PCDH7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.7557678222656	2	472.756007	943.497461	-0.42571	-0.00020126	0.70012	0.00033099	0.27441	0.00012973	472.756162330355	25.453	0.69131	25.416	25.118	25.81	-0.037176					45	20	3	0	0	0	0.66686	1	1007	1007		42.864	0.38981	1	115270			64773	6528	43081	43099	73437	73437					0.023451771722307058
VTVECWYEG	9	Unmodified	_VTVECWYEG_					0	0	0			REV__ENSG00000143436|ENST00000368830|MRPL9	REV__ENSG00000143436|ENST00000368830|MRPL9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	543.2357788085938	2	543.23405	1084.45355	0.10024	5.4453E-05	2.3967	0.001302	2.4969	0.0013564	543.2351452091217	43.061	0.84738	43.031	42.675	43.522	-0.029461					36	19	3	0	0	0	0.47272	1	3261	3261		53.351	2.016	1	282850	+		64774	19809	43082	43100	73438	73438					-0.08530175316423083
VTVGGTPVTRL	11	Unmodified	_VTVGGTPVTRL_					0	0	0		ENST00000219334.9_1_16:68405177-68405606:-|nuORF	ENST00000219334.9_1_16:68405177-68405606:-|nuORF	ENST00000219334.9_1_16:68405177-68405606:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.3272094726562	2	550.327131	1098.63971	1.2755	0.00070194	-1.1938	-0.00065698	0.081698	4.4961E-05	550.3264981095151	100.02	1.2719	100.07	99.504	100.78	0.047523					72	28	3	0	0	0	0.72106	1	10712	10712		28.081	3.5623	1	456100			64775	9161	43083	43101	73439	73439					0.09433389914420331
VTVGSNLNL	9	Unmodified	_VTVGSNLNL_					0	0	0			REV__ENST00000298316.6_1_14:50361063-50361216:+|nuORF	REV__ENST00000298316.6_1_14:50361063-50361216:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.7583923339844	2	458.758549	915.502546	0.64958	0.000298	-0.6151	-0.00028218	0.03447	1.5814E-05	458.75808970868314	28.836	1.0267	28.663	28.294	29.32	-0.17336					44	24	4	0	0	0	0.26953	1	1791	1791		67.494	14.557	1	328910	+		64776	24733	43084	43102	73440	73440					0.04141481034844219
VTVGVKKMDDT	11	Unmodified	_VTVGVKKMDDT_					0	0	0			REV__ENSG00000044524|ENST00000336596|EPHA3	REV__ENSG00000044524|ENST00000336596|EPHA3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.710693359375	2	596.815738	1191.61692	-0.90963	-0.00054288	-4.261	-0.002543	-5.1706	-0.0030859	596.8126399951464	28.275	0.14584	28.251	28.163	28.308	-0.023556					4	2	2	0	0	0	0.17295	1	1338	1338		16.717	0	1	10336	+		64777	16343	43085	43103	73441	73441					0.028780027346329007
VTVLELAAL	9	Unmodified	_VTVLELAAL_					0	0	0			REV__ENSG00000178852|ENST00000331493|EFCAB13	REV__ENSG00000178852|ENST00000331493|EFCAB13	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.78973388671875	2	464.789318	927.564084	-0.88537	-0.00041151	3.8254	0.001778	2.94	0.0013665	464.79098266785445	37.031	1.7451	36.978	35.836	37.581	-0.053558					86	38	3	0	0	0	0.78536	1	2443	2443		29.15	1.2673	1	298640	+		64778	22298	43086	43104	73442	73442					0.09740412734140591
VTVPPGPSL	9	Unmodified	_VTVPPGPSL_					0	0	0		nc|ENSG00000159352|P55036-2|PSMD4;ENSG00000159352|ENST00000368884|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000480546.1_1_10:95718567-95721153:-|nuORF	nc|ENSG00000159352|P55036-2|PSMD4	nc|ENSG00000159352|P55036-2|PSMD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.7528381347656	2	433.752736	865.490919	-0.89842	-0.00038969	1.1465	0.00049731	0.2481	0.00010762	433.7530751140989	61.556	3.4273	61.944	61.394	64.821	0.38845					196	83	3	0	0	0	0.049188	9	6549	6520;6549;6561;6585;6609;6622;6646;6720;6732		108.09	28.148	1	960390			64779	5526	43087	43105	73443;73444;73445;73446;73447;73448;73449;73450;73451	73444					0.052792840115330364
VTVPPGPSL	9	Unmodified	_VTVPPGPSL_					0	0	0		nc|ENSG00000159352|P55036-2|PSMD4;ENSG00000159352|ENST00000368884|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000480546.1_1_10:95718567-95721153:-|nuORF	nc|ENSG00000159352|P55036-2|PSMD4	nc|ENSG00000159352|P55036-2|PSMD4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.7525939941406	2	433.752736	865.490919	0.16558	7.1822E-05	0.12045	5.2244E-05	0.28603	0.00012407	433.75263120517457	61.559	3.4925	62.113	61.36	64.852	0.55386					226	86	4	0	0	0	0.0018445	11	6598	6532;6541;6552;6565;6574;6585;6598;6610;6620;6645;6719		143.11	41.895	1	1110200			64780	5526	43087	43105	73452;73453;73454;73455;73456;73457;73458;73459;73460;73461;73462	73458					0.052792840115330364
VTVTPSTTP	9	Unmodified	_VTVTPSTTP_					0	0	0			REV__nc|ENSG00000186583|Q76KD6-2|SPATC1	REV__nc|ENSG00000186583|Q76KD6-2|SPATC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.7460021972656	2	451.745108	901.475663	0.15669	7.0785E-05	1.8522	0.0008367	2.0088	0.00090749	451.74584001279584	34.375	0.68409	34.484	34.169	34.853	0.10829					52	30	2	0	0	0	0.62081	1	1745	1745		45.952	0	1	197020	+		64781	22866	43088	43106	73463	73463					0.02098372423665751
VTVVRPEC	8	Unmodified	_VTVVRPEC_					0	0	0			REV__ENST00000488426.5_1_6:31922795-31926316:-|nuORF	REV__ENST00000488426.5_1_6:31922795-31926316:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	452.2417907714844	2	451.741845	901.469137	0.28142	0.00012713	-2.9845	-0.0013482	-2.7031	-0.0012211	451.73988819994463	30.253	0.39808	30.25	30.069	30.467	-0.0022526					31	18	2	0	0	0	0.93786	1	1331	1331		53.351	3.3269	1	80187	+		64782	27593	43089	43107	73464	73464					0.01446155991300202
VTVVRSCPA	9	Unmodified	_VTVVRSCPA_					0	0	0			REV__ENST00000303407.11_3_9:136896778-136897270:-|nuORF	REV__ENST00000303407.11_3_9:136896778-136897270:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.2536315917969	2	466.25512	930.495686	0.40858	0.0001905	-3.173	-0.0014794	-2.7644	-0.0012889	466.2535455662522	60.895	1.1821	61.014	60.015	61.197	0.11901					69	45	2	0	0	0	0.64555	1	5237	5237		44.377	1.981	1	266480	+		64783	24802	43090	43108	73465	73465					0.027658448826286985
VTVWRRPRRPQ	11	Unmodified	_VTVWRRPRRPQ_					0	0	0			REV__ENSG00000166261|ENST00000530393|ZNF202	REV__ENSG00000166261|ENST00000530393|ZNF202	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7662353515625	3	484.288254	1449.84293	0.66095	0.00032009	1.3002	0.00062968	1.9612	0.00094976	484.28879859009294	36.593	0.94963	36.875	36.348	37.297	0.28173					32	22	3	0	0	0	0.17955	1	2878	2878		5.4129	0	1	111990	+		64784	21271	43091	43109	73466	73466					0.13600552479397265
VTYKENIAK	9	Unmodified	_VTYKENIAK_					0	0	0		nc|ENSG00000157765|O95436-2|SLC34A2;chr4:25648356-25662498|31|147.52|0.51|8.17|+|ENST00000645788|SLC34A2,SLC34A2;ENSG00000157765|ENST00000382051|SLC34A2	nc|ENSG00000157765|O95436-2|SLC34A2	nc|ENSG00000157765|O95436-2|SLC34A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.802001953125	2	533.300581	1064.58661	-0.46862	-0.00024992	0.32551	0.00017359	-0.14311	-7.6322E-05	533.3007266349649	31.256	2.7034	31.336	29.971	32.674	0.079834					123	61	4	0	0	0	0.69624	1	2170	2170		40.778	1.972	1	663570			64785	421	43092	43110	73467	73467					0.05690012131753974
VTYLHLGQFY	10	Unmodified	_VTYLHLGQFY_					0	0	0			REV__nc|ENSG00000135476|Q14674-2|ESPL1	REV__nc|ENSG00000135476|Q14674-2|ESPL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.2154846191406	3	414.21688	1239.62881	1.1628	0.00048165	-4.2749	-0.0017707	-3.1121	-0.0012891	414.21502831262836	34.163	0.97582	34.468	34.159	35.135	0.30494					57	23	3	0	0	0	0.63899	1	2540	2540		47.96	9.2059	1	1175800	+		64786	19228	43093	43111	73468	73468					0.018579875401655954
VTYNGVDNNK	10	Unmodified	_VTYNGVDNNK_					0	0	0		ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7;ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000469999.1_1_7:152065296-152065533:+|nuORF;ENST00000492940.1_1_7:35930257-35938044:+|nuORF	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.2717895507812	2	562.272552	1122.53055	-0.14272	-8.0249E-05	0.28458	0.00016001	0.14186	7.9762E-05	562.2724700731663	27.871	0.85773	27.774	27.403	28.261	-0.096947					27	19	2	0	0	0	0.2953	1	1639	1639		72.879	21.544	1	342150			64787	3230	43094	43112	73469	73469					-0.025812407757030087
VTYNGVDNNK	10	Unmodified	_VTYNGVDNNK_					0	0	0		ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7;ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000469999.1_1_7:152065296-152065533:+|nuORF;ENST00000492940.1_1_7:35930257-35938044:+|nuORF	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	ENST00000425198.1_1_7:35872473-35938044:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.2715454101562	2	562.272552	1122.53055	1.4357	0.00080727	-1.362	-0.00076581	0.073733	4.1458E-05	562.271558600629	27.952	0.52739	27.698	27.411	27.938	-0.25465					29	11	3	0	0	0	0.13693	2	1662	1662;1673		96.665	30.862	1	359420			64788	3230	43094	43112	73470;73471	73470					-0.025812407757030087
VTYPIYIFIY	10	Unmodified	_VTYPIYIFIY_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|227|2|anti-sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|227|2|anti-sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|227|2|anti-sense	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	646.3543701171875	2	646.352283	1290.69001	1.5266	0.00098671	-3.0219	-0.0019532	-1.4953	-0.00096651	646.3502625541325	75.703	1.1023	76.27	75.706	76.808	0.56679					64	26	3	0	0	0	0.50394	1	8582	8582		55.504	4.3115	1	797260			64789	14506	43095	43113	73472	73472					0.05629499519568526
VTYQCVPGY	9	Unmodified	_VTYQCVPGY_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	515.2421875	2	515.239135	1028.46372	0.33773	0.00017401	2.1315	0.0010982	2.4692	0.0012722	515.2401038031029	47.483	0.76162	47.52	47.314	48.076	0.037731					48	27	3	0	0	0	0.35373	1	3546	3546		60.972	2.19	1	705570			64790	3201	43096	43114	73473	73473					-0.0493756759117332
VTYSPVSG	8	Unmodified	_VTYSPVSG_					0	0	0		nc|ENSG00000146842|Q96SK2-3|TMEM209;nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-4|TMEM209	nc|ENSG00000146842|Q96SK2-3|TMEM209	nc|ENSG00000146842|Q96SK2-3|TMEM209	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.202392578125	2	405.205618	808.396684	-0.0495	-2.0058E-05	-2.1856	-0.00088563	-2.2351	-0.00090569	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.86288	1	7713	7713		26.796	0	1	162370			64791	4864	43097	43115	73474	73474					-0.015178548106064227
VTYSPVSG	8	Unmodified	_VTYSPVSG_					0	0	0		nc|ENSG00000146842|Q96SK2-3|TMEM209;nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-4|TMEM209	nc|ENSG00000146842|Q96SK2-3|TMEM209	nc|ENSG00000146842|Q96SK2-3|TMEM209	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.235595703125	2	405.205618	808.396684	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.265	1	63.387	62.887	63.887	0.12252								0	0	0	0.29344	1	5541	5541		31.955	3.7006	1				64792	4864	43097	43115	73475	73475					-0.015178548106064227
VVAAVLVR	8	Unmodified	_VVAAVLVR_					0	0	0			REV__ENSG00000107566|ENST00000421367|ERLIN1	REV__ENSG00000107566|ENST00000421367|ERLIN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2726135253906	2	413.779088	825.543623	-0.13628	-5.639E-05	1.2148	0.00050267	1.0786	0.00044628	413.77921677117615	29.317	0.86463	29.288	28.997	29.862	-0.029207					39	19	4	0	0	0	0.4196	1	1859	1859		20.482	0	1	209280	+		64793	17663	43098	43116	73476	73476					0.12387286864998259
VVACSRLGR	9	Unmodified	_VVACSRLGR_					0	0	0			REV__nc|ENSG00000144057|Q96JF0-2|ST6GAL2	REV__nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	480.77056884765625	2	480.774011	959.533469	-2.5003	-0.0012021	-2.9045	-0.0013964	-5.4048	-0.0025985	480.7724817241375	41.101	0.70321	41.107	40.803	41.506	0.0065727					33	18	2	0	0	0	0.19818	1	3006	3006		74.255	0.28031	1	446290	+		64794	19871	43099	43117	73477	73477					0.052083558681147224
VVACSRLGR	9	Unmodified	_VVACSRLGR_					0	0	0			REV__nc|ENSG00000144057|Q96JF0-2|ST6GAL2	REV__nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-MATCH-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	480.774011	959.533469	-1.7281	-0.00083081	-3.671	-0.0017649	-5.3991	-0.0025958	480.77205912979906	40.726	0.55909	40.726	40.475	41.034	0	-0.26268	0.0004794	NaN	74.255	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	236880	+		64795	19871	43099	43117							0.052083558681147224
VVACSRLGR	9	Unmodified	_VVACSRLGR_					0	0	0			REV__nc|ENSG00000144057|Q96JF0-2|ST6GAL2	REV__nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	480.774011	959.533469	-0.89304	-0.00042935	-3.9101	-0.0018799	-4.8032	-0.0023092	480.77199336465685	41.06	0.54614	41.064	40.845	41.391	0.0043983	0.075583	0.00024951	NaN	74.255	32	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	358340	+		64796	19871	43099	43117							0.052083558681147224
VVADDRIP	8	Unmodified	_VVADDRIP_					0	0	0			REV__nc|ENSG00000139350|Q8NHV4-3|NEDD1	REV__nc|ENSG00000139350|Q8NHV4-3|NEDD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7449035644531	2	442.745442	883.476331	-1.0712	-0.00047426	-0.44731	-0.00019804	-1.5185	-0.00067231	442.7451375740114	88.75	0.64149	89.22	88.876	89.518	0.47068					51	15	4	0	0	0	0.93786	1	10537	10537		53.351	5.6941	1	6813200	+		64797	19535	43100	43118	73478	73478					0.029932118633610116
VVAENIPVIPL	11	Unmodified	_VVAENIPVIPL_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.353759765625	2	582.355357	1162.69616	-0.28407	-0.00016543	-2.8357	-0.0016514	-3.1197	-0.0018168	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.69995	1	10949	10949		31.53	1.2121	1	61091000			64798	2794	43101	43119	73479	73479					0.12132017751082458
VVAENIPVIPL	11	Unmodified	_VVAENIPVIPL_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.353759765625	2	582.355357	1162.69616	0.72244	0.00042072	-3.9804	-0.002318	-3.258	-0.0018973	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.69995	1	10866	10866		31.53	5.9558	1	132960000			64799	2794	43101	43119	73480	73480					0.12132017751082458
VVAENIPVIPL	11	Unmodified	_VVAENIPVIPL_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3536376953125	2	582.355357	1162.69616	-1.3468	-0.00078429	-1.8918	-0.0011017	-3.2386	-0.001886	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.7342	1	11075	11075		25.574	1.0549	1	120000000			64800	2794	43101	43119	73481	73481					0.12132017751082458
VVAFLLWL	8	Unmodified	_VVAFLLWL_					0	0	0			REV__ENSG00000213714|ENST00000371325|FAM209B	REV__ENSG00000213714|ENST00000371325|FAM209B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	480.28082275390625	2	480.799489	959.584425	0.77021	0.00037031	2.5045	0.0012042	3.2747	0.0015745	480.8006357381433	99.097	1.6175	99.253	98.859	100.48	0.15659					65	37	2	0	0	0	0.4196	1	10371	10371		24.504	16.273	1	191730	+		64801	23631	43102	43120	73482	73482					0.1030162818460667
VVAGDRPR	8	Unmodified	_VVAGDRPR_					0	0	0			REV__ENSG00000116329|ENST00000234961|OPRD1	REV__ENSG00000116329|ENST00000234961|OPRD1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	435.2516784667969	2	435.251226	868.487899	-1.2943	-0.00056337	1.5486	0.00067401	0.25421	0.00011065	435.2518092902168	80.062	8.1751	80.062	78.037	86.212	0					634	245	3	0	0	0	0.87922	1	7425	7425		31.955	1.4512	1	1788100	+		64802	18197	43103	43121	73483	73483					0.04839453677379879
VVAGDRPR	8	Unmodified	_VVAGDRPR_					0	0	0			REV__ENSG00000116329|ENST00000234961|OPRD1	REV__ENSG00000116329|ENST00000234961|OPRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	435.25140380859375	2	435.251226	868.487899	0.1561	6.7942E-05	0.060812	2.6468E-05	0.21691	9.4411E-05	435.251154741552	79.8	11.137	79.743	74.722	85.858	-0.056503					656	322	4	0	0	0	0.84341	1	8057	8057		24.203	0	1	3292300	+		64803	18197	43103	43121	73484	73484					0.04839453677379879
VVAGDRPR	8	Unmodified	_VVAGDRPR_					0	0	0			REV__ENSG00000116329|ENST00000234961|OPRD1	REV__ENSG00000116329|ENST00000234961|OPRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	435.25128173828125	2	435.251226	868.487899	1.6099	0.00070073	-1.4582	-0.00063469	0.15172	6.6038E-05	435.2505064944063	79.933	10.357	79.986	75.401	85.758	0.053848					661	302	5	0	0	0	0.90465	1	8001	8001		40.573	3.4135	1	3370400	+		64804	18197	43103	43121	73485	73485					0.04839453677379879
VVAGDRPR	8	Unmodified	_VVAGDRPR_					0	0	0			REV__ENSG00000116329|ENST00000234961|OPRD1	REV__ENSG00000116329|ENST00000234961|OPRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2512512207031	2	435.251226	868.487899	0.54862	0.00023879	-0.38221	-0.00016636	0.16641	7.243E-05	435.2509502732575	79.86	8.5111	80.001	77.882	86.393	0.14117					541	231	4	0	0	0	0.87922	1	7580	7580		31.955	2.8053	1	2743300	+		64805	18197	43103	43121	73486	73486					0.04839453677379879
VVAGDRPR	8	Unmodified	_VVAGDRPR_					0	0	0			REV__ENSG00000116329|ENST00000234961|OPRD1	REV__ENSG00000116329|ENST00000234961|OPRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2515869140625	2	435.251226	868.487899	-1.5314	-0.00066653	1.7496	0.00076151	0.21823	9.4987E-05	435.2518742947478	79.505	10.628	79.604	75.539	86.167	0.098701					616	315	4	0	0	0	0.884	1	7074	7074		33.516	3.0119	1	2494100	+		64806	18197	43103	43121	73487	73487					0.04839453677379879
VVAGDRPR	8	Unmodified	_VVAGDRPR_					0	0	0			REV__ENSG00000116329|ENST00000234961|OPRD1	REV__ENSG00000116329|ENST00000234961|OPRD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	435.2515869140625	2	435.251226	868.487899	-0.32142	-0.0001399	0.46296	0.0002015	0.14154	6.1604E-05	435.251335728379	79.519	6.1283	79.935	78.193	84.322	0.41621					314	147	4	0	0	0	0.89494	1	9038	9038		37.159	5.2042	1	2020200	+		64807	18197	43103	43121	73488	73488					0.04839453677379879
VVAGLLVY	8	Unmodified	_VVAGLLVY_					0	0	0			REV__ENSG00000167601|ENST00000301178|AXL	REV__ENSG00000167601|ENST00000301178|AXL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2577209472656	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.84567	1	625	625		24.504	2.8017	1	817900	+		64808	21401	43104	43122	73489	73489					0.08288775879520927
VVAGNHDI	8	Unmodified	_VVAGNHDI_					0	0	0		ENST00000592894.5_1_18:11886654-11897104:-|nuORF;nc|ENSG00000154889|Q53F39-5|MPPE1;ENST00000592447.5_1_18:11886825-11897263:-|nuORF;ENST00000589731.5_1_18:11886458-11897263:-|nuORF;nc|ENSG00000154889|Q53F39-4|MPPE1;nc|ENSG00000154889|Q53F39-2|MPPE1;nc|ENSG00000154889|Q53F39-3|MPPE1;ENSG00000154889|ENST00000588072|MPPE1	ENST00000592894.5_1_18:11886654-11897104:-|nuORF	ENST00000592894.5_1_18:11886654-11897104:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.2373962402344	2	412.716685	823.418816	-1.8294	-0.00075501	1.2117	0.00050009	-0.61766	-0.00025492	412.7168245795354	79.662	0.13744	79.793	79.678	79.816	0.13086					6	4	2	0	0	0	0.4196	1	7557	7557		20.482	0	1	23083			64809	5303	43105	43123	73490	73490					4.369657813185768E-05
VVAGQAHAQV	10	Unmodified	_VVAGQAHAQV_					0	0	0		ENSG00000142798|ENST00000374695|HSPG2	ENSG00000142798|ENST00000374695|HSPG2	ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	490.2671813964844	2	490.269616	978.524678	-0.08195	-4.0178E-05	-2.5087	-0.00123	-2.5907	-0.0012701	490.2683992201926	84.078	3.5378	84.144	83.169	86.707	0.06678					153	81	2	0	0	0	0.85934	1	8466	8466		35.618	7.736	1	271000			64810	4584	43106	43124	73491	73491					0.03455705503267836
VVAGRPRG	8	Unmodified	_VVAGRPRG_					0	0	0		ENST00000544255.5_1_6:160208889-160210626:-|nuORF;ENST00000537390.5_3_6:160209690-160210626:-|nuORF;ENST00000546023.1_1_6:160210218-160210626:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF	ENST00000544255.5_1_6:160208889-160210626:-|nuORF	ENST00000544255.5_1_6:160208889-160210626:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2485656738281	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.81724	1	9095	9095		14.664	0	1	56664000			64811	13451	43107	43125	73492	73492					0.06959774885558545
VVAGRPRG	8	Unmodified	_VVAGRPRG_					0	0	0		ENST00000544255.5_1_6:160208889-160210626:-|nuORF;ENST00000537390.5_3_6:160209690-160210626:-|nuORF;ENST00000546023.1_1_6:160210218-160210626:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF	ENST00000544255.5_1_6:160208889-160210626:-|nuORF	ENST00000544255.5_1_6:160208889-160210626:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.2480773925781	2	406.248486	810.48242	0.62319	0.00025317	-0.33604	-0.00013652	0.28715	0.00011666	406.24832193354507	88.314	2.7413	88.464	87.768	90.51	0.15055					246	64	6	0	0	0	0.80706	1	8968	8968		19.36	0	1	38001000			64812	13451	43107	43125	73493	73493					0.06959774885558545
VVAIQKRF	8	Unmodified	_VVAIQKRF_					0	0	0		nc|ENSG00000177398|Q5DID0-3|UMODL1;ENSG00000177398|ENST00000408910|UMODL1;nc|ENSG00000177398|Q5DID0-4|UMODL1;nc|ENSG00000177398|Q5DID0-2|UMODL1;ENST00000400423.6_1_21:43540943-43557727:+|nuORF	nc|ENSG00000177398|Q5DID0-3|UMODL1	nc|ENSG00000177398|Q5DID0-3|UMODL1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	480.28143310546875	2	480.803094	959.591636	-0.095121	-4.5734E-05	-4.1858	-0.0020125	-4.2809	-0.0020583	480.80108227961557	99.354	1.8824	99.404	98.928	100.81	0.04982					64	43	2	0	0	0	0.4196	1	10615	10615		37.028	3.5129	1	207350			64813	7137	43108	43126	73494	73494					0.1102236078503438
VVAKALLGP	9	Unmodified	_VVAKALLGP_					0	0	0		ENST00000439473.5_1_7:102916053-102920599:-|nuORF;ENST00000312132.8_1_7:102916053-102920599:-|nuORF	ENST00000439473.5_1_7:102916053-102920599:-|nuORF	ENST00000439473.5_1_7:102916053-102920599:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	434.2874755859375	2	434.286746	866.558939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.255	1	58.226	57.726	58.726	-0.029865								0	0	0	0.33676	1	5409	5409		18.324	2.6882	1				64814	9937	43109	43127	73495	73495					0.12032153662187284
VVAPAFGR	8	Unmodified	_VVAPAFGR_					0	0	0			REV__ENSG00000267221|ENST00000587304|C17orf113	REV__ENSG00000267221|ENST00000587304|C17orf113	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.7391662597656	2	408.739963	815.465373	0.14715	6.0146E-05	-0.89765	-0.0003669	-0.7505	-0.00030676	408.73946186394085	35.247	2.35	35.353	35.171	37.521	0.10604					172	71	3	0	0	0	0.81548	1	2030	2030		20.482	0	1	1448600	+		64815	23967	43110	43128	73496	73496					0.05025854279756459
VVAPAFGR	8	Unmodified	_VVAPAFGR_					0	0	0			REV__ENSG00000267221|ENST00000587304|C17orf113	REV__ENSG00000267221|ENST00000587304|C17orf113	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	408.7385559082031	2	408.739963	815.465373	-0.071529	-2.9237E-05	-0.60598	-0.00024769	-0.67751	-0.00027692	408.739581399817	35.502	2.5644	35.442	35.231	37.796	-0.060333					164	76	3	0	0	0	0.88915	1	2074	2074		35.201	8.4046	1	1654100	+		64816	23967	43110	43128	73497	73497					0.05025854279756459
VVAPRLTRRGL	11	Unmodified	_VVAPRLTRRGL_					0	0	0			REV__nc|ENSG00000007402|Q9NY47-4|CACNA2D2	REV__nc|ENSG00000007402|Q9NY47-4|CACNA2D2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.2665100097656	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.249	1	41.323	40.823	41.823	0.073414								0	0	0	0.56276	1	2683	2683		19.263	1.4295	1		+		64817	15809	43111	43129	73498	73498					0.1689555795353499
VVAPVMLILF	10	Oxidation (M)	_VVAPVM(Oxidation (M))LILF_		VVAPVM(1)LILF		VVAPVM(55)LILF	0	0	1			REV__ENST00000335420.9_1_7:129771218-129771323:+|nuORF	REV__ENST00000335420.9_1_7:129771218-129771323:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.3402709960938	2	559.338121	1116.66169	0.29153	0.00016306	1.7047	0.00095351	1.9962	0.0011166	559.3389740626094	79.985	1.0157	80.401	79.955	80.97	0.41621					39	23	2	0	0	0	0.51323	1	9180	9180		54.765	21.249	1	372190	+		64818	25168	43112	43130	73499	73499		390			0.10802478338632682
VVARHLLLM	9	Unmodified	_VVARHLLLM_					0	0	0			REV__ENST00000546712.1_1_12:56395721-56396056:+|nuORF	REV__ENST00000546712.1_1_12:56395721-56396056:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	526.3240966796875	2	526.325879	1050.63721	0.45814	0.00024113	-2.6629	-0.0014015	-2.2047	-0.0011604	526.3243663512045	59.761	1.5451	59.877	59.01	60.555	0.1157					98	50	2	0	0	0	0.77546	1	5185	5185		31.955	2.8053	1	175310	+		64819	19546	43113	43131	73500	73500					0.11391262975757854
VVARRERFLA	10	Unmodified	_VVARRERFLA_					0	0	0			REV__ENSG00000158122|ENST00000375234|PRXL2C	REV__ENSG00000158122|ENST00000375234|PRXL2C	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2492980957031	3	406.247285	1215.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.25	1	111.3	110.8	111.8	0.049095								0	0	0	0.45132	1	13501	13501		16.717	1.3843	1		+		64820	20589	43114	43132	73501	73501					0.12079296028127828
VVARVLVN	8	Unmodified	_VVARVLVN_					0	0	0			REV__ENSG00000160888|ENST00000292433|IER2	REV__ENSG00000160888|ENST00000292433|IER2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	435.2515869140625	2	435.281995	868.549437	-1.4022	-0.00061034	-0.73602	-0.00032038	-2.1382	-0.00093071	435.28154503904494	76.164	0.36839	76.253	75.973	76.341	0.089363					16	11	2	0	0	0	0.4196	1	7074	7074		18.324	6.1176	1	48680	+		64821	20748	43115	43133	73502	73502					0.10990385376669565
VVARVPGSQ	9	Unmodified	_VVARVPGSQ_					0	0	0		ENSG00000197724|ENST00000359246|PHF2	ENSG00000197724|ENST00000359246|PHF2	ENSG00000197724|ENST00000359246|PHF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.7670593261719	2	456.766709	911.518865	0.96672	0.00044157	0.54053	0.0002469	1.5073	0.00068846	456.7668840789674	16.289	0.34063	16.367	16.203	16.544	0.077959					30	14	3	0	0	0	0.7932	1	93	93		18.262	0.89712	1	148700			64822	8193	43116	43134	73503	73503					0.05956606991617264
VVARWLSL	8	Unmodified	_VVARWLSL_					0	0	0		ENST00000467617.1_1_22:41363658-41368489:+|nuORF	ENST00000467617.1_1_22:41363658-41368489:+|nuORF	ENST00000467617.1_1_22:41363658-41368489:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2867431640625	2	472.28982	942.565087	-1.7052	-0.00080535	-1.864	-0.00088033	-3.5691	-0.0016857	472.28898055731867	100.86	0.81633	101.01	100.62	101.44	0.15863					35	19	2	0	0	0	0.86288	1	10480	10480		26.796	5.0938	1	239800			64823	12160	43117	43135	73504	73504					0.09150671893701201
VVASASALII	10	Unmodified	_VVASASALII_					0	0	0		ENST00000484010.1_1_12:32101431-32101545:+|nuORF	ENST00000484010.1_1_12:32101431-32101545:+|nuORF	ENST00000484010.1_1_12:32101431-32101545:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.7979736328125	2	472.294768	942.574983	-0.27988	-0.00013219	0.10119	4.7794E-05	-0.17868	-8.4392E-05	472.29457624012065	32.872	0.43057	32.817	32.539	32.969	-0.05434					16	9	2	0	0	0	0.85934	1	1973	1973		35.618	2.8059	1	33096			64824	12527	43118	43136	73505	73505					0.10139815108436778
VVASSRRG	8	Unmodified	_VVASSRRG_					0	0	0			REV__ENST00000497173.5_3_3:134515011-134670235:+|nuORF	REV__ENST00000497173.5_3_3:134515011-134670235:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.8089599609375	2	416.243401	830.472249	1.2698	0.00052856	-2.802	-0.0011663	-1.5322	-0.00063775	416.24227203962295	19.16	0.27358	18.69	18.609	18.882	-0.46967					8	5	2	0	0	0	0.4196	1	499	499		17.365	0	1	25315	+		64825	27765	43119	43137	73506	73506					0.050231671603341965
VVATFLIEIA	10	Unmodified	_VVATFLIEIA_					0	0	0		nc|ENSG00000100258|Q9BU23-3|LMF2;nc|ENSG00000100258|Q9BU23-2|LMF2;ENSG00000100258|ENST00000474879|LMF2;ENST00000514938.1_1_22:50943733-50944613:-|nuORF	nc|ENSG00000100258|Q9BU23-3|LMF2	nc|ENSG00000100258|Q9BU23-3|LMF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.32763671875	2	538.323525	1074.6325	3.5618	0.0019174	3.4053	0.0018331	6.967	0.0037505	538.3252790877391	103.43	1.149	103.39	103.04	104.18	-0.043755					64	27	3	0	0	0	0.71042	1	11363	11363		44.117	1.7207	1	1012900			64826	1813	43120	43138	73507	73507					0.09816657313990618
VVAVAAGAR	9	Unmodified	_VVAVAAGAR_					0	0	0		ENST00000566699.1_1_7:139877068-139877485:+|nuORF	ENST00000566699.1_1_7:139877068-139877485:+|nuORF	ENST00000566699.1_1_7:139877068-139877485:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	407.2525329589844	2	407.250695	812.486836	-0.38103	-0.00015517	2.6364	0.0010737	2.2554	0.00091851	407.25164953473296	22.981	0.73201	22.929	22.657	23.389	-0.052114					30	23	2	0	0	0	0.7932	1	778	778		18.324	2.6882	1	26637			64827	13940	43121	43139	73508	73508					0.07309239308460747
VVAVAAGAR	9	Unmodified	_VVAVAAGAR_					0	0	0		ENST00000566699.1_1_7:139877068-139877485:+|nuORF	ENST00000566699.1_1_7:139877068-139877485:+|nuORF	ENST00000566699.1_1_7:139877068-139877485:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	407.250695	812.486836	2.8479	0.0011598	-0.7296	-0.00029713	2.1183	0.00086269	407.25030393967916	22.878	0.7418	22.828	22.611	23.353	-0.050077	-0.050413	-0.0011493	NaN	18.324	32	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31968			64828	13940	43121	43139							0.07309239308460747
VVAVYVTG	8	Unmodified	_VVAVYVTG_					0	0	0		ENST00000247461.8_1_5:179125991-179132738:+|nuORF	ENST00000247461.8_1_5:179125991-179132738:+|nuORF	ENST00000247461.8_1_5:179125991-179132738:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2326354980469	2	404.234179	806.453805	-1.2631	-0.0005106	-2.2404	-0.00090563	-3.5035	-0.0014162	404.2330856183434	82.529	2.4032	82.529	81.258	83.662	0					126	65	3	0	0	0	0.82464	1	7687	7687		21.702	1.2205	1	248830			64829	9277	43122	43140	73509	73509					0.04283612465769693
VVAVYVTG	8	Unmodified	_VVAVYVTG_					0	0	0		ENST00000247461.8_1_5:179125991-179132738:+|nuORF	ENST00000247461.8_1_5:179125991-179132738:+|nuORF	ENST00000247461.8_1_5:179125991-179132738:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.23236083984375	2	404.234179	806.453805	0.88498	0.00035774	-4.1951	-0.0016958	-3.3101	-0.0013381	404.2323708520731	84.87	3.8747	85.31	83.261	87.136	0.43967					162	94	4	0	0	0	0.87276	1	9878	9878		29.842	3.0454	1	2366300			64830	9277	43122	43140	73510	73510					0.04283612465769693
VVCIGTEELL	10	Unmodified	_VVCIGTEELL_					0	0	0			REV__ENSG00000166123|ENST00000340124|GPT2;REV__ENSG00000167701|ENST00000394955|GPT	REV__ENSG00000166123|ENST00000340124|GPT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3265380859375	2	538.288825	1074.5631	0.068674	3.6966E-05	-1.5406	-0.0008293	-1.472	-0.00079233	538.2877870196797	100.77	0.7343	100.98	100.58	101.32	0.2058					34	17	3	0	0	0	0.37624	1	10555	10555		45.952	5.1738	1	407640	+		64831	21252;21419	43123	43141	73511	73511					0.028798303029361705
VVCIGTEELL	10	Unmodified	_VVCIGTEELL_					0	0	0			REV__ENSG00000166123|ENST00000340124|GPT2;REV__ENSG00000167701|ENST00000394955|GPT	REV__ENSG00000166123|ENST00000340124|GPT2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3264770507812	2	538.288825	1074.5631	-1.4904	-0.00080224	-1.3878	-0.00074702	-2.8781	-0.0015493	538.2879018463188	100.8	0.64699	100.97	100.77	101.42	0.17199					27	15	2	0	0	0	0.37624	1	10548	10548		45.952	3.5558	1	260060	+		64832	21252;21419	43123	43141	73512	73512					0.028798303029361705
VVCLKLKHLGT	11	Unmodified	_VVCLKLKHLGT_					0	0	0			REV__ENSG00000183340|ENST00000332349|JRKL	REV__ENSG00000183340|ENST00000332349|JRKL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	605.8721313476562	2	605.870651	1209.72675	-0.19668	-0.00011917	2.5775	0.0015616	2.3808	0.0014424	605.8720562136382	100.58	1.534	100.58	100.08	101.62	0					94	35	4	0	0	0	0.72918	1	10207	10207		26.693	2.1737	1	971210	+		64833	22599	43124	43142	73513	73513					0.13027472864473566
VVCLLQLAHLV	11	Unmodified	_VVCLLQLAHLV_					0	0	0		ENST00000468916.1_1_3:119367508-119379270:-|nuORF;nc|ENSG00000121577|Q9HBU9-2|POPDC2;nc|ENSG00000121577|Q9HBU9|POPDC2;ENSG00000121577|ENST00000493094|POPDC2	ENST00000468916.1_1_3:119367508-119379270:-|nuORF	ENST00000468916.1_1_3:119367508-119379270:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.2471618652344	3	403.245893	1206.71585	3.4575	0.0013942	-0.41238	-0.00016629	3.0451	0.0012279	403.245812263779	104.32	2.7467	104.55	103.67	106.42	0.2268					126	71	3	0	0	0	0.77937	1	12711	12711		14.086	1.1285	1	736130			64834	3187	43125	43143	73514	73514					0.12076070490161328
VVCNILLLDNT	11	Unmodified	_VVCNILLLDNT_					0	0	0		ENSG00000088179|ENST00000263708|PTPN4;ENST00000460289.5_1_2:120517896-120637673:+|nuORF;ENST00000485247.1_1_2:120517896-120640079:+|nuORF	ENSG00000088179|ENST00000263708|PTPN4	ENSG00000088179|ENST00000263708|PTPN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	608.8363647460938	2	608.833931	1215.65331	5.8969	0.0035902	0.055119	3.3558E-05	5.952	0.0036238	608.8338483742878	110.97	0.68941	111.02	110.65	111.33	0.049088					52	27	4	0	0	0	0.78986	1	13477	13477		13.454	0.64233	1	202050			64835	1585	43126	43144	73515	73515					0.05410879631358512
VVCQIQLKRI	10	Unmodified	_VVCQIQLKRI_					0	0	0			REV__ENSG00000104529|ENST00000618139|EEF1D	REV__ENSG00000104529|ENST00000618139|EEF1D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.58074951171875	3	400.581276	1198.722	-1.9294	-0.00077288	0.34825	0.0001395	-1.5811	-0.00063337	400.5812185024314	112.11	1.0204	112.09	111.8	112.82	-0.019882					97	31	4	0	0	0	0.86802	1	11936	11936		27.047	0	1	9176900	+		64836	17462	43127	43145	73516	73516					0.13058588721742126
VVCSLFLF	8	Unmodified	_VVCSLFLF_					0	0	0			REV__ENST00000582282.5_1_18:74696797-74728973:-|nuORF	REV__ENST00000582282.5_1_18:74696797-74728973:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2537841796875	2	464.254057	926.493561	-1.1814	-0.00054845	1.1549	0.00053618	-0.026428	-1.2269E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.92176	1	7855	7855		46.766	5.9883	1	946850	+		64837	29058	43128	43146	73517	73517					0.027374161448278755
VVCSYFAR	8	Unmodified	_VVCSYFAR_					0	0	0		ENSG00000229676|ENST00000456783|ZNF492;chr19:22654015-22663800|51|12.06|0.17|6.11|+|2|ZNF492,ZNF492|1	ENSG00000229676|ENST00000456783|ZNF492	ENSG00000229676|ENST00000456783|ZNF492	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	471.7718505859375	2	472.736563	943.458573	-0.11483	-5.4283E-05	3.0624	0.0014477	2.9476	0.0013934	472.73760685952243	32.201	0.5162	32.308	32.059	32.575	0.10707					15	11	2	0	0	0	0.4196	1	2253	2253		18.324	0	1	107610			64838	8727	43129	43147	73518	73518					-0.015418266631286315
VVDAGEYS	8	Unmodified	_VVDAGEYS_					0	0	0		nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;ENST00000494839.1_1_1:228481917-228482770:+|nuORF;nc|ENSG00000154358|Q5VST9-6|OBSCN;ENSG00000154358|ENST00000680850|OBSCN	nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	420.1904296875	2	420.192708	838.370863	-0.017504	-7.3551E-06	-3.0933	-0.0012998	-3.1109	-0.0013072	420.191334340302	94.011	4.005	94.447	92.079	96.084	0.43539					179	98	2	0	0	0	0.884	1	11149	11149		33.516	3.0119	1	4147200			64839	15003;5274	43130	43148	73519	73519					-0.05478749052895182
VVDGLLHPIL	10	Unmodified	_VVDGLLHPIL_					0	0	0			REV__ENSG00000137409|ENST00000373627|MTCH1	REV__ENSG00000137409|ENST00000373627|MTCH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3272094726562	2	538.329142	1074.64373	-1.4901	-0.00080219	-2.8806	-0.0015507	-4.3708	-0.0023529	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.86305	1	10431	10431		31.955	5.2619	1	93615000	+		64840	19382	43131	43149	73520	73520					0.10939479408125408
VVDGRTLKAS	10	Unmodified	_VVDGRTLKAS_					0	0	0		nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035888671875	2	523.303655	1044.59276	-0.83282	-0.00043582	0.63031	0.00032984	-0.2025	-0.00010597	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.80179	1	8169	8169		39.253	6.4404	1	2778600			64841	1451	43132	43150	73521	73521					0.07224530363282611
VVDGRTLKAS	10	Unmodified	_VVDGRTLKAS_					0	0	0		nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3037719726562	2	523.303655	1044.59276	-0.79828	-0.00041774	0.68278	0.0003573	-0.1155	-6.0444E-05	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.86587	1	8908	8908		29.17	0.020503	1	9288900			64842	1451	43132	43150	73522	73522					0.07224530363282611
VVDGRTLKAS	10	Unmodified	_VVDGRTLKAS_					0	0	0		nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303466796875	2	523.303655	1044.59276	-0.041206	-2.1563E-05	-0.13765	-7.2034E-05	-0.17886	-9.3597E-05	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.86272	1	9046	9046		24.519	0	1	12431000			64843	1451	43132	43150	73523	73523					0.07224530363282611
VVDGRTLKAS	10	Unmodified	_VVDGRTLKAS_					0	0	0		nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3036499023438	2	523.303655	1044.59276	1.1688	0.00061163	-1.3622	-0.00071286	-0.19344	-0.00010123	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.86348	1	9085	9085		31.53	0	1	12580000			64844	1451	43132	43150	73524	73524					0.07224530363282611
VVDGRTLKAS	10	Unmodified	_VVDGRTLKAS_					0	0	0		nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.30322265625	2	523.303655	1044.59276	-0.178	-9.3149E-05	-0.24214	-0.00012672	-0.42015	-0.00021986	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.86106	1	8453	8453		33.922	1.1092	1	4158500			64845	1451	43132	43150	73525	73525					0.07224530363282611
VVDGRTLKAS	10	Unmodified	_VVDGRTLKAS_					0	0	0		nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3040161132812	2	523.303655	1044.59276	0.69703	0.00036476	-1.0638	-0.00055667	-0.36673	-0.00019191	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.8545	1	8344	8344		36.447	8.3653	1	3801600			64846	1451	43132	43150	73526	73526					0.07224530363282611
VVDGRTLKAS	10	Unmodified	_VVDGRTLKAS_					0	0	0		nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	nc|ENSG00000080802|O95628-5|CNOT4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3037109375	2	523.303655	1044.59276	1.1935	0.00062456	-1.2901	-0.00067513	-0.09664	-5.0572E-05	523.302873653264	88.424	6.0133	88.872	87.685	93.699	0.44893					406	147	6	0	0	0	0.86348	1	10606	10606		31.53	0	1	11944000			64847	1451	43132	43150	73527	73527					0.07224530363282611
VVDGVFLPR	9	Unmodified	_VVDGVFLPR_					0	0	0		ENST00000561843.1_1_16:66974535-66975594:+|nuORF;nc|ENSG00000172831|O00748-2|CES2;ENST00000568470.5_1_16:66969809-66977925:+|nuORF;ENSG00000172831|ENST00000317091|CES2;nc|ENSG00000172831|O00748-5|CES2;nc|ENSG00000172831|O00748-4|CES2	ENST00000561843.1_1_16:66974535-66975594:+|nuORF	ENST00000561843.1_1_16:66974535-66975594:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.29083251953125	2	501.292559	1000.57057	-0.50311	-0.0002522	-3.7566	-0.0018832	-4.2597	-0.0021354	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.72402	1	8858	8858		38.806	0.99462	1	10459000			64848	6799	43133	43151	73528	73528					0.07030350685511166
VVDGVFLPR	9	Unmodified	_VVDGVFLPR_					0	0	0		ENST00000561843.1_1_16:66974535-66975594:+|nuORF;nc|ENSG00000172831|O00748-2|CES2;ENST00000568470.5_1_16:66969809-66977925:+|nuORF;ENSG00000172831|ENST00000317091|CES2;nc|ENSG00000172831|O00748-5|CES2;nc|ENSG00000172831|O00748-4|CES2	ENST00000561843.1_1_16:66974535-66975594:+|nuORF	ENST00000561843.1_1_16:66974535-66975594:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2904357910156	2	501.292559	1000.57057	0.16565	8.304E-05	-4.0766	-0.0020436	-3.911	-0.0019605	501.29038817053765	84.175	3.017	84.622	82.686	85.703	0.44736					226	73	4	0	0	0	0.7932	1	9810	9810		26.693	1.1189	1	2717900			64849	6799	43133	43151	73529	73529					0.07030350685511166
VVDITSPHSFH	11	Unmodified	_VVDITSPHSFH_					0	0	0			REV__ENSG00000144668|ENST00000264741|ITGA9	REV__ENSG00000144668|ENST00000264741|ITGA9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8104248046875	2	619.811845	1237.60914	-0.24749	-0.0001534	3.0323	0.0018794	2.7848	0.001726	619.8137253691873	54.001	0.63056	53.995	53.728	54.359	-0.0053711					31	19	2	0	0	0	0.62914	1	4782	4782		39.253	0	1	90899	+		64850	19906	43134	43152	73530	73530					-0.0001638847061258275
VVDLTGVLL	9	Unmodified	_VVDLTGVLL_					0	0	0			REV__ENSG00000109436|ENST00000442267|TBC1D9	REV__ENSG00000109436|ENST00000442267|TBC1D9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.7908935546875	2	464.789318	927.564084	0.2474	0.00011499	2.8684	0.0013332	3.1158	0.0014482	464.7904221539816	34.07	1.6806	34.28	33.524	35.204	0.21003					97	40	4	0	0	0	0.7932	1	2481	2481		25.45	0	1	944210	+		64851	17756	43135	43153	73531	73531					0.09740412734140591
VVDLVADVL	9	Unmodified	_VVDLVADVL_					0	0	0			REV__ENSG00000104833|ENST00000264071|TUBB4A	REV__ENSG00000104833|ENST00000264071|TUBB4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	471.7790832519531	2	471.778951	941.543348	0.57127	0.00026951	-0.52977	-0.00024994	0.041494	1.9576E-05	471.7785193324983	82.773	0.8857	82.707	82.281	83.166	-0.066185					44	20	3	0	0	0	0.5393	1	8405	8405		50.025	2.1089	1	313290	+		64852	17478	43136	43154	73532	73532					0.07023822354460663
VVDQIDTL	8	Unmodified	_VVDQIDTL_					0	0	0		nc|ENSG00000184838|Q569H4-3|PRR16;ENSG00000184838|ENST00000407149|PRR16	nc|ENSG00000184838|Q569H4-3|PRR16	nc|ENSG00000184838|Q569H4-3|PRR16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7450866699219	2	451.745108	901.475663	-0.42544	-0.00019219	0.58191	0.00026287	0.15647	7.0685E-05	451.7452985454062	33.515	0.67748	33.459	33.146	33.823	-0.056385					47	15	4	0	0	0	0.47906	1	2026	2026		76.847	8.3619	1	315680			64853	7643	43137	43155	73533	73533					0.02098372423665751
VVDQIDTL	8	Unmodified	_VVDQIDTL_					0	0	0		nc|ENSG00000184838|Q569H4-3|PRR16;ENSG00000184838|ENST00000407149|PRR16	nc|ENSG00000184838|Q569H4-3|PRR16	nc|ENSG00000184838|Q569H4-3|PRR16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.74420166015625	2	451.745108	901.475663	-0.010196	-4.6062E-06	1.0103	0.0004564	1.0001	0.0004518	451.7456051590094	33.34	1.2132	33.338	32.979	34.193	-0.0016365					54	27	3	0	0	0	0.67263	1	1937	1937		68.485	7.5128	1	302940			64854	7643	43137	43155	73534	73534					0.02098372423665751
VVDRLQALN	9	Unmodified	_VVDRLQALN_					0	0	0		ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	ENSG00000158486|ENST00000698260|DNAH3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	514.2979736328125	2	514.298373	1026.58219	-1.5684	-0.00080663	0.74156	0.00038138	-0.82686	-0.00042525	514.2990007980452	96.402	2.2846	96.604	95.027	97.312	0.20242					111	53	3	0	0	0	0.73802	1	9905	9905		37.812	1.3648	1	524360			64855	5483	43138	43156	73535	73535					0.0699654770885445
VVDSCSMLYR	10	Carbamidomethyl (C)	_VVDSC(Carbamidomethyl (C))SMLYR_	VVDSC(1)SMLYR		VVDSC(48)SMLYR		0	1	0		ENSG00000075234|ENST00000381031|TTC38	ENSG00000075234|ENST00000381031|TTC38	ENSG00000075234|ENST00000381031|TTC38	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.2799682617188	2	615.286291	1228.55803	-0.33218	-0.00020438	-4.2974	-0.0026441	-4.6295	-0.0028485	615.2836152967006	56.482	0.98592	56.47	56.226	57.212	-0.012203					72	40	2	0	0	0	0.64457	1	5095	5095		47.657	7.5992	1	2193600			64856	1325	43139	43157	73536	73536	18				-0.04710796831341213
VVEARRHILA	10	Unmodified	_VVEARRHILA_					0	0	0		ENST00000487247.5_1_7:75612990-75614618:+|nuORF;ENSG00000127948|ENST00000461988|POR	ENST00000487247.5_1_7:75612990-75614618:+|nuORF	ENST00000487247.5_1_7:75612990-75614618:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.35205078125	2	582.354014	1162.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.74	1	114.72	114.22	115.22	-0.024452								0	0	0	0.45132	1	12717	12717		20.947	0.95016	1				64857	3520	43140	43158	73537	73537					0.11863607136797327
VVEARRHILA	10	Unmodified	_VVEARRHILA_					0	0	0		ENST00000487247.5_1_7:75612990-75614618:+|nuORF;ENSG00000127948|ENST00000461988|POR	ENST00000487247.5_1_7:75612990-75614618:+|nuORF	ENST00000487247.5_1_7:75612990-75614618:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3525390625	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.86718	1	12573	12573		27.882	4.3595	1	3937500			64858	3520	43140	43158	73538	73538					0.11863607136797327
VVEDEKNL	8	Unmodified	_VVEDEKNL_					0	0	0		ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.24908447265625	2	473.248015	944.481476	-0.51455	-0.00024351	0.54458	0.00025772	0.030035	1.4214E-05	473.24818540235697	28.981	1.8023	28.961	28.523	30.325	-0.019407					101	54	4	0	0	0	0.91472	1	1471	1471		44.117	1.2525	1	574970			64859	5338	43141	43159	73539	73539					0.007014709353256876
VVEEQTQL	8	Unmodified	_VVEEQTQL_					0	0	0			REV__ENSG00000230797|ENST00000429584|YY2	REV__ENSG00000230797|ENST00000429584|YY2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.2481384277344	2	473.248015	944.481476	-0.25967	-0.00012289	0.32175	0.00015227	0.06208	2.9379E-05	473.2481063617417	28.965	1.9145	28.925	28.439	30.354	-0.039907					103	58	4	0	0	0	0.38363	1	1497	1497		90.777	8.4716	1	555530	+		64860	23759	43142	43160	73540	73540					0.00701470935348425
VVEEQTQL	8	Unmodified	_VVEEQTQL_					0	0	0			REV__ENSG00000230797|ENST00000429584|YY2	REV__ENSG00000230797|ENST00000429584|YY2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.2483215332031	2	473.248015	944.481476	-0.51455	-0.00024351	0.54458	0.00025772	0.030035	1.4214E-05	473.24818540235697	28.981	1.8023	28.961	28.523	30.325	-0.019407					101	54	4	0	0	0	0.38363	2	1423	1423;1448		90.777	8.4716	1	574970	+		64861	23759	43142	43160	73541;73542	73541					0.00701470935348425
VVEEYPPL	8	Unmodified	_VVEEYPPL_					0	0	0			REV__nc|ENSG00000166272|Q9NX94|WBP1L	REV__nc|ENSG00000166272|Q9NX94|WBP1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.2483215332031	2	473.250026	944.485499	0.34188	0.00016179	-4.4363	-0.0020995	-4.0944	-0.0019377	473.24782054202086	28.883	1.4946	28.914	28.31	29.804	0.030945					99	51	4	0	0	0	0.65768	1	1397	1397		69.093	5.7867	1	514570	+		64862	21275	43143	43161	73543	73543					0.011035604290555057
VVEEYPPL	8	Unmodified	_VVEEYPPL_					0	0	0			REV__nc|ENSG00000166272|Q9NX94|WBP1L	REV__nc|ENSG00000166272|Q9NX94|WBP1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.2482604980469	2	473.250026	944.485499	-0.25967	-0.00012289	-3.9284	-0.0018591	-4.188	-0.001982	473.2481063617417	28.965	1.9145	28.925	28.439	30.354	-0.039907					103	58	4	0	0	0	0.45589	1	1484	1484		77.944	3.4272	1	555530	+		64863	21275	43143	43161	73544	73544					0.011035604290555057
VVEEYPPL	8	Unmodified	_VVEEYPPL_					0	0	0			REV__nc|ENSG00000166272|Q9NX94|WBP1L	REV__nc|ENSG00000166272|Q9NX94|WBP1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.2480163574219	2	473.250026	944.485499	-0.51454	-0.00024351	-3.7055	-0.0017537	-4.2201	-0.0019972	473.24818540235697	28.981	1.8023	28.961	28.523	30.325	-0.019407					101	54	4	0	0	0	0.45589	1	1429	1429		77.944	11.515	1	574970	+		64864	21275	43143	43161	73545	73545					0.011035604290555057
VVEGRDPL	8	Unmodified	_VVEGRDPL_					0	0	0		ENST00000250937.7_1_19:3496808-3500628:-|nuORF	ENST00000250937.7_1_19:3496808-3500628:-|nuORF	ENST00000250937.7_1_19:3496808-3500628:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.7445983886719	2	442.745442	883.476331	-1.0712	-0.00047426	-0.44731	-0.00019804	-1.5185	-0.00067231	442.7451375740114	88.75	0.64149	89.22	88.876	89.518	0.47068					51	15	4	0	0	0	0.92457	1	10499	10499		47.916	0	1	6813200			64865	9295	43144	43162	73546	73546					0.029932118633610116
VVEHTYTRVP	10	Unmodified	_VVEHTYTRVP_					0	0	0			REV__ENST00000554619.5_1_12:56361683-56363594:+|nuORF	REV__ENST00000554619.5_1_12:56361683-56363594:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.823974609375	2	600.822212	1199.62987	-0.59314	-0.00035637	4.4207	0.002656	3.8275	0.0022997	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.8545	1	6754	6754		36.447	2.2742	1	825510	+		64866	18540	43145	43163	73547	73547					0.03804201909042604
VVEHTYVR	8	Unmodified	_VVEHTYVR_					0	0	0			REV__ENSG00000170312|ENST00000395284|CDK1	REV__ENSG00000170312|ENST00000395284|CDK1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2903747558594	2	501.771991	1001.52943	-0.42489	-0.0002132	-3.2328	-0.0016221	-3.6577	-0.0018353	501.7700527836513	85.808	1.1707	85.866	84.892	86.063	0.057899					39	26	2	0	0	0	0.4196	1	8633	8633		29.15	10.825	1	86740	+		64867	21647	43146	43164	73548	73548					0.02872589646040069
VVEIIRHLASD	11	Unmodified	_VVEIIRHLASD_					0	0	0			REV__nc|ENSG00000067057|Q01813-2|PFKP	REV__nc|ENSG00000067057|Q01813-2|PFKP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3795776367188	2	626.356419	1250.69829	1.3713	0.00085895	-1.0638	-0.00066634	0.3075	0.00019261	626.3562490687709	106.26	0.39205	106.41	106.3	106.69	0.14843					11	8	2	0	0	0	0.17347	1	11389	11389		44.377	16.296	1	53994	+		64868	16533	43147	43165	73549	73549					0.0829644648890735
VVELKLMSL	9	Unmodified	_VVELKLMSL_					0	0	0		chr17:40751326-40751513|21|564.1|0.0|25.75|-|2|TE_info:L3,L3_dup41101,CR1,LINE,donor,-,40751513,40751677|KRT25,None|4	chr17:40751326-40751513|21|564.1|0.0|25.75|-|2|TE_info:L3,L3_dup41101,CR1,LINE,donor,-,40751513,40751677|KRT25,None|4	chr17:40751326-40751513|21|564.1|0.0|25.75|-|2|TE_info:L3,L3_dup41101,CR1,LINE,donor,-,40751513,40751677|KRT25,None|4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.31396484375	2	516.312103	1030.60965	0.87601	0.00045229	2.4044	0.0012414	3.2804	0.0016937	516.313353785105	99.116	3.433	99.164	98.543	101.98	0.047523					334	80	5	0	0	0	0.7932	1	10877	10877		26.693	2.4902	1	67025000			64869	226	43148	43166	73550	73550					0.09557314924882121
VVELYRRCP	9	Unmodified	_VVELYRRCP_					0	0	0			REV__chr4:137530623-137532255|34|42.65|0.45|6.56|-|1|None,PCDH18|1	REV__chr4:137530623-137532255|34|42.65|0.45|6.56|-|1|None,PCDH18|1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3298950195312	2	567.808051	1133.60155	-0.49252	-0.00027966	2.9825	0.0016935	2.4899	0.0014138	567.8097486964484	94.12	0.90317	94.12	93.665	94.568	0					33	20	2	0	0	0	0.20789	1	9301	9301		30.504	0	1	38913	+		64870	15820	43149	43167	73551	73551					0.04009180728121464
VVELYRRCP	9	Unmodified	_VVELYRRCP_					0	0	0			REV__chr4:137530623-137532255|34|42.65|0.45|6.56|-|1|None,PCDH18|1	REV__chr4:137530623-137532255|34|42.65|0.45|6.56|-|1|None,PCDH18|1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3294677734375	2	567.808051	1133.60155	2.0572	0.0011681	0.072236	4.1016E-05	2.1295	0.0012091	568.309522737438	94.553	2.4788	94.493	93.499	95.978	-0.059212					74	58	2	0	0	0	0.20789	1	10045	10045		30.504	12.242	1	183770	+		64871	15820	43149	43167	73552	73552					0.04009180728121464
VVERVLTFL	9	Unmodified	_VVERVLTFL_					0	0	0		nc|ENSG00000167196|Q8NEZ5-3|FBXO22;ENSG00000167196|ENST00000308275|FBXO22;nc|ENSG00000167196|Q8NEZ5-2|FBXO22;ENST00000565131.5_1_15:76196304-76197948:+|nuORF	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	nc|ENSG00000167196|Q8NEZ5-3|FBXO22	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.32666015625	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.74721	2	12701	12428;12701		37.159	8.0096	1	4041000			64872	6275	43150	43168	73553;73554	73554					0.10939479408125408
VVESDINGL	9	Unmodified	_VVESDINGL_					0	0	0		CON__O76009;CON__Q15323	CON__O76009	CON__O76009	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.2481689453125	2	473.248015	944.481476	0.34188	0.00016179	-0.18615	-8.8093E-05	0.15574	7.3701E-05	473.24782054202086	28.883	1.4946	28.914	28.31	29.804	0.030945					99	51	4	0	0	0	0.17307	1	1385	1385		79.451	8.1553	1	514570		+	64873	574	43151	43169	73555	73555					0.00701470935348425
VVESDINGL	9	Unmodified	_VVESDINGL_					0	0	0		CON__O76009;CON__Q15323	CON__O76009	CON__O76009	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.2481384277344	2	473.248015	944.481476	-0.25967	-0.00012289	0.32175	0.00015227	0.06208	2.9379E-05	473.2481063617417	28.965	1.9145	28.925	28.439	30.354	-0.039907					103	58	4	0	0	0	0.35373	1	1503	1503		60.972	0	1	555530		+	64874	574	43151	43169	73556	73556					0.00701470935348425
VVEVDNSI	8	Unmodified	_VVEVDNSI_					0	0	0			REV__nc|ENSG00000198947|P11532-4|DMD	REV__nc|ENSG00000198947|P11532-4|DMD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.7292175292969	2	437.729458	873.444362	-0.35376	-0.00015485	0.99666	0.00043627	0.64289	0.00028141	437.7297635993945	26.354	0.82893	26.315	25.936	26.765	-0.038525					38	17	3	0	0	0	0.67263	1	1188	1188		68.485	2.6815	1	145470	+		64875	23425	43152	43170	73557	73557					0.0025779938957839477
VVEVIGSIE	9	Unmodified	_VVEVIGSIE_					0	0	0			REV__ENSG00000106399|ENST00000223129|RPA3	REV__ENSG00000106399|ENST00000223129|RPA3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.7673034667969	2	472.768583	943.522613	-1.1355	-0.00053681	-1.706	-0.00080653	-2.8414	-0.0013433	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.78058	1	8053	8053		30.504	2.6214	1	292450	+		64876	17610	43153	43171	73558	73558					0.048592319748081536
VVEVSAGGDL	10	Unmodified	_VVEVSAGGDL_					0	0	0		ENSG00000182253|ENST00000336292|SYNM	ENSG00000182253|ENST00000336292|SYNM	ENSG00000182253|ENST00000336292|SYNM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.24859619140625	2	473.248015	944.481476	-0.25967	-0.00012289	0.32175	0.00015227	0.06208	2.9379E-05	473.2481063617417	28.965	1.9145	28.925	28.439	30.354	-0.039907					103	58	4	0	0	0	0.43769	1	1476	1476		60.972	3.5193	1	555530			64877	7439	43154	43172	73559	73559					0.00701470935348425
VVEVSAGGDL	10	Unmodified	_VVEVSAGGDL_					0	0	0		ENSG00000182253|ENST00000336292|SYNM	ENSG00000182253|ENST00000336292|SYNM	ENSG00000182253|ENST00000336292|SYNM	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.24822998046875	2	473.248015	944.481476	-0.51455	-0.00024351	0.54458	0.00025772	0.030035	1.4214E-05	473.24818540235697	28.981	1.8023	28.961	28.523	30.325	-0.019407					101	54	4	0	0	0	0.31414	1	1435	1435		71.296	2.5089	1	574970			64878	7439	43154	43172	73560	73560					0.00701470935348425
VVEVTAEASG	10	Unmodified	_VVEVTAEASG_					0	0	0		ENST00000586324.1_1_19:37756948-37758090:-|nuORF	ENST00000586324.1_1_19:37756948-37758090:-|nuORF	ENST00000586324.1_1_19:37756948-37758090:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2437744140625	2	481.245472	960.476391	-0.87717	-0.00042213	1.1248	0.0005413	0.24762	0.00011917	481.2459873948013	21.579	0.4278	21.522	21.319	21.747	-0.057203					29	16	2	0	0	0	0.74274	1	608	608		42.396	0	1	48970			64879	14164	43155	43173	73561	73561					-0.005428329272717747
VVEVVTVIV	9	Unmodified	_VVEVVTVIV_					0	0	0		ENST00000483074.1_1_13:53226892-53231674:+|nuORF	ENST00000483074.1_1_13:53226892-53231674:+|nuORF	ENST00000483074.1_1_13:53226892-53231674:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80621337890625	2	478.804968	955.595384	-1.7576	-0.00084154	4.2135	0.0020174	2.4559	0.0011759	478.8067170717128	39.306	2.8901	39.306	37.925	40.815	0					149	75	3	0	0	0	0.7932	1	2416	2416		24.203	0	1	336090			64880	12502	43156	43174	73562	73562					0.11580985768227947
VVEVVVVLT	9	Unmodified	_VVEVVVVLT_					0	0	0			REV__chr12:54282611-54283827|63|1507.67|0.0|27.17|+|0|HNRNPA1,HNRNPA1|1	REV__chr12:54282611-54283827|63|1507.67|0.0|27.17|+|0|HNRNPA1,HNRNPA1|1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.80438232421875	2	478.804968	955.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.729	1	42.729	42.229	43.229	0								0	0	0	0.32469	1	2983	2983		21.96	0.25755	1		+		64881	15542	43157	43175	73563	73563					0.11580985768239316
VVEVVVVLT	9	Unmodified	_VVEVVVVLT_					0	0	0			REV__chr12:54282611-54283827|63|1507.67|0.0|27.17|+|0|HNRNPA1,HNRNPA1|1	REV__chr12:54282611-54283827|63|1507.67|0.0|27.17|+|0|HNRNPA1,HNRNPA1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.8046875	2	478.804968	955.595384	-2.2898	-0.0010963	3.6554	0.0017502	1.3657	0.00065389	478.80658371263473	41.743	1.2165	41.746	40.986	42.202	0.0034142					57	30	2	0	0	0	0.7932	1	3087	3087		24.203	0	1	281640	+		64882	15542	43157	43175	73564	73564					0.11580985768239316
VVFAHYGPV	9	Unmodified	_VVFAHYGPV_					0	0	0		ENSG00000155016|ENST00000332884|CYP2U1	ENSG00000155016|ENST00000332884|CYP2U1	ENSG00000155016|ENST00000332884|CYP2U1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2575988769531	2	494.766178	987.517802	-2.1683	-0.0010728	3.8415	0.0019006	1.6731	0.00082781	494.76788843549144	40.17	1.201	40.538	39.94	41.141	0.36797					66	31	3	0	0	0	0.20789	1	3494	3494		29.842	0	1	946800			64883	5306	43158	43176	73565	73565					0.023543926227148404
VVFAVRVPG	9	Unmodified	_VVFAVRVPG_					0	0	0			REV__nc|ENSG00000118523|P29279-2|CCN2	REV__nc|ENSG00000118523|P29279-2|CCN2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.286376953125	2	472.28982	942.565087	-1.7052	-0.00080534	-2.46	-0.0011618	-4.1652	-0.0019672	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.7932	1	12910	12910		20.482	4.0087	1	3080300	+		64884	18321	43159	43177	73566	73566					0.0915067189371257
VVFEIKKEK	9	Unmodified	_VVFEIKKEK_					0	0	0			REV__ENST00000476524.1_1_21:34903719-34911621:-|nuORF	REV__ENST00000476524.1_1_21:34903719-34911621:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.341552734375	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.78536	2	12959	12153;12959		29.15	8.2026	1	4071000	+		64885	20638	43160	43178	73567;73568	73568					0.11535748579603933
VVFHHDYFL	9	Unmodified	_VVFHHDYFL_					0	0	0		ENST00000284425.6_1_17:67136847-67137891:-|nuORF	ENST00000284425.6_1_17:67136847-67137891:-|nuORF	ENST00000284425.6_1_17:67136847-67137891:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.7559204101562	2	588.795466	1175.57638	0.50287	0.00029609	3.5869	0.0021119	4.0897	0.002408	588.7978051117412	56.208	0.4386	56.767	56.572	57.01	0.55954					15	9	2	0	0	0	0.20789	1	5809	5809		28.254	5.2118	1	376200			64886	9647	43161	43179	73569	73569					-0.004385508028008189
VVFIGRPIDGY	11	Unmodified	_VVFIGRPIDGY_					0	0	0			REV__ENST00000523511.1_1_8:38021190-38029494:-|nuORF	REV__ENST00000523511.1_1_8:38021190-38029494:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	618.3457641601562	2	618.342781	1234.67101	0.89263	0.00055195	4.1677	0.002577	5.0603	0.003129	618.3452359789501	97.829	3.1632	97.989	96.92	100.08	0.16073					214	73	4	0	0	0	0.6921	1	10107	10107		32.812	1.2826	1	874220	+		64887	22061	43162	43180	73570	73570					0.06305962948522392
VVFKLIYF	8	Unmodified	_VVFKLIYF_					0	0	0			REV__ENST00000573286.2_2_17:44116960-44117263:-|nuORF	REV__ENST00000573286.2_2_17:44116960-44117263:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	514.2977294921875	2	514.812596	1027.61064	0.77782	0.00040043	-2.8196	-0.0014515	-2.0417	-0.0010511	514.8134369581895	96.33	0.99001	96.493	96.105	97.095	0.16317					38	22	3	0	0	0	0.4196	1	9939	9939		8.8223	0	1	162030	+		64888	28958	43163	43181	73571	73571					0.09793897356098569
VVFLALQIE	9	Unmodified	_VVFLALQIE_					0	0	0			REV__ENSG00000198965|ENST00000641067|OR10R2	REV__ENSG00000198965|ENST00000641067|OR10R2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.313720703125	2	516.310418	1030.60628	3.1012	0.0016012	3.8274	0.0019761	6.9286	0.0035773	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.76402	1	13177	13177		35.201	9.7505	1	1162600	+		64889	23431	43164	43182	73572	73572					0.09220388142512093
VVFLLGSRKHL	11	Unmodified	_VVFLLGSRKHL_					0	0	0		ENST00000559051.1_1_15:65411613-65412071:-|nuORF	ENST00000559051.1_1_15:65411613-65412071:-|nuORF	ENST00000559051.1_1_15:65411613-65412071:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	423.5976867675781	3	423.599435	1267.77648	-0.18424	-7.8043E-05	-3.969	-0.0016813	-4.1532	-0.0017593	423.5976787176537	105.93	2.5264	105.91	105.23	107.75	-0.025146					222	59	5	0	0	0	0.71803	2	11447	11447;11530		28.577	2.3457	1	5735600			64890	13803	43165	43183	73573;73574	73573					0.15329923864783268
VVFLLGSRKHL	11	Unmodified	_VVFLLGSRKHL_					0	0	0		ENST00000559051.1_1_15:65411613-65412071:-|nuORF	ENST00000559051.1_1_15:65411613-65412071:-|nuORF	ENST00000559051.1_1_15:65411613-65412071:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	423.5976867675781	3	423.599435	1267.77648	-1.7147	-0.00072636	-2.5402	-0.001076	-4.2549	-0.0018024	423.5982725309242	105.5	3.0222	105.66	104.96	107.98	0.15925					250	75	5	0	0	0	0.71803	2	11241	11241;11277		28.577	7.5445	1	8925200			64891	13803	43165	43183	73575;73576	73575					0.15329923864783268
VVFLLGSRKHL	11	Unmodified	_VVFLLGSRKHL_					0	0	0		ENST00000559051.1_1_15:65411613-65412071:-|nuORF	ENST00000559051.1_1_15:65411613-65412071:-|nuORF	ENST00000559051.1_1_15:65411613-65412071:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	423.5978088378906	3	423.599435	1267.77648	-1.87	-0.00079214	-2.3626	-0.0010008	-4.2326	-0.0017929	423.59834897722675	105.64	2.006	105.71	105.05	107.06	0.073112					176	48	5	0	0	0	0.73621	1	11268	11268		25.126	5.0955	1	4588600			64892	13803	43165	43183	73577	73577					0.15329923864783268
VVFLPPPPLA	10	Unmodified	_VVFLPPPPLA_					0	0	0		ENST00000491028.1_1_13:113745283-113749039:+|nuORF	ENST00000491028.1_1_13:113745283-113749039:+|nuORF	ENST00000491028.1_1_13:113745283-113749039:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	525.6117553710938	2	525.323328	1048.6321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.871	1	40.953	40.453	41.453	0.081345								0	0	0	0.45132	1	2630	2630		26.796	7.4361	1				64893	12675	43166	43184	73578	73578					0.10973282384793492
VVFVIDPGFAK	11	Unmodified	_VVFVIDPGFAK_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	596.3418579101562	2	596.342249	1190.66995	-0.062847	-3.7478E-05	0.22336	0.0001332	0.16051	9.5719E-05	596.3422789379024	74.883	1.322	75.274	74.912	76.234	0.3911					61	31	4	0	0	0	0.31387	3	8448	8448;8461;8473		72.879	28.502	1	937350			64894	2468	43167	43185	73579;73580;73581	73579					0.08223748579621315
VVFVIDPGFAK	11	Unmodified	_VVFVIDPGFAK_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.341552734375	2	596.342249	1190.66995	-0.16726	-9.9744E-05	0.58274	0.00034751	0.41548	0.00024777	596.3423318606634	74.738	1.0572	75.303	74.805	75.862	0.56458					58	25	4	0	0	0	0.026828	2	8459	8459;8471		106.68	55.155	1	1011900			64895	2468	43167	43185	73582;73583	73582					0.08223748579621315
VVGAASLGPL	10	Unmodified	_VVGAASLGPL_					0	0	0			REV__ENST00000536690.1_1_11:64064895-64067293:+|nuORF	REV__ENST00000536690.1_1_11:64064895-64067293:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2666320800781	2	442.26601	882.517468	-0.19204	-8.4931E-05	0.59771	0.00026435	0.40568	0.00017942	442.26615321014356	37.584	1.2785	37.897	36.921	38.2	0.31312					68	31	3	0	0	0	0.15855	1	3032	3032		94.006	37.285	1	1603100	+		64896	28413	43168	43186	73584	73584					0.07150972902854846
VVGAASLGPL	10	Unmodified	_VVGAASLGPL_					0	0	0			REV__ENST00000536690.1_1_11:64064895-64067293:+|nuORF	REV__ENST00000536690.1_1_11:64064895-64067293:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.26568603515625	2	442.26601	882.517468	0.69427	0.00030705	-0.25783	-0.00011403	0.43645	0.00019302	442.26575041604	37.447	1.2889	37.933	36.958	38.246	0.48581					72	31	4	0	0	0	0.53935	1	3027	3027		53.351	0.41475	1	1479500	+		64897	28413	43168	43186	73585	73585					0.07150972902854846
VVGAPGARAAA	11	Unmodified	_VVGAPGARAAA_					0	0	0			REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	REV__ENST00000395595.7_1_22:51221660-51222060:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.2723388671875	2	470.272158	938.529764	-1.0259	-0.00048243	0.96935	0.00045586	-0.056507	-2.6574E-05	470.27263416214146	92.531	3.2683	92.531	91.425	94.693	0					153	75	5	0	0	0	0.70623	1	9079	9079		30.504	2.6214	1	1224900	+		64898	26115	43169	43187	73586	73586					0.058040093658974
VVGAPGRR	8	Unmodified	_VVGAPGRR_					0	0	0			REV__nc|ENSG00000170703|Q8N841-4|TTLL6	REV__nc|ENSG00000170703|Q8N841-4|TTLL6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2478332519531	2	406.248486	810.48242	3.1805	0.0012921	-2.5321	-0.0010287	0.64845	0.00026343	406.2473596194762	111.52	0.96954	111.55	111.15	112.12	0.030388					88	37	3	0	0	0	0.81548	1	12205	12205		20.482	0	1	158570	+		64899	21682	43170	43188	73587	73587					0.06959774885558545
VVGAPGRR	8	Unmodified	_VVGAPGRR_					0	0	0			REV__nc|ENSG00000170703|Q8N841-4|TTLL6	REV__nc|ENSG00000170703|Q8N841-4|TTLL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.2491455078125	2	406.248486	810.48242	3.1442	0.0012773	-3.4094	-0.0013851	-0.26526	-0.00010776	406.24697611805044	112.74	0.52679	112.77	112.38	112.91	0.030602					35	22	2	0	0	0	0.81724	1	13643	13643		14.664	0.88877	1	70745	+		64900	21682	43170	43188	73588	73588					0.06959774885558545
VVGARPGR	8	Unmodified	_VVGARPGR_					0	0	0			REV__chr10:102231101-102231588|57|125.47|0.92|7.1|-|2|PITX3,PITX3|1	REV__chr10:102231101-102231588|57|125.47|0.92|7.1|-|2|PITX3,PITX3|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2486877441406	2	406.248486	810.48242	3.0872	0.0012542	-2.8806	-0.0011702	0.20655	8.391E-05	406.247379362225	88.286	2.7121	88.336	87.639	90.351	0.050407					262	63	6	0	0	0	0.80706	2	9059	9059;9107		20.482	1.1219	1	56664000	+		64901	15463	43171	43189	73589;73590	73589					0.06959774885569914
VVGAVELLL	9	Unmodified	_VVGAVELLL_					0	0	0		nc|ENSG00000133107|Q9UBN4-4|TRPC4;nc|ENSG00000133107|Q9UBN4-3|TRPC4;nc|ENSG00000133107|Q9UBN4-2|TRPC4;ENSG00000133107|ENST00000379705|TRPC4;nc|ENSG00000133107|Q9UBN4-5|TRPC4;nc|ENSG00000133107|Q9UBN4-7|TRPC4;nc|ENSG00000133107|Q9UBN4-6|TRPC4;ENSG00000072315|ENST00000262839|TRPC5	nc|ENSG00000133107|Q9UBN4-4|TRPC4	nc|ENSG00000133107|Q9UBN4-4|TRPC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.7901611328125	2	456.791861	911.569169	-0.73784	-0.00033704	3.4705	0.0015853	2.7326	0.0012482	456.79333098184276	49.768	2.9671	49.744	48.401	51.368	-0.024029					154	74	4	0	0	0	0.7932	1	4150	4150		13.775	0	1	161210			64902	3856	43172	43190	73591	73591					0.10984716596760791
VVGAVELLL	9	Unmodified	_VVGAVELLL_					0	0	0		nc|ENSG00000133107|Q9UBN4-4|TRPC4;nc|ENSG00000133107|Q9UBN4-3|TRPC4;nc|ENSG00000133107|Q9UBN4-2|TRPC4;ENSG00000133107|ENST00000379705|TRPC4;nc|ENSG00000133107|Q9UBN4-5|TRPC4;nc|ENSG00000133107|Q9UBN4-7|TRPC4;nc|ENSG00000133107|Q9UBN4-6|TRPC4;ENSG00000072315|ENST00000262839|TRPC5	nc|ENSG00000133107|Q9UBN4-4|TRPC4	nc|ENSG00000133107|Q9UBN4-4|TRPC4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.7927551269531	2	456.791861	911.569169	-1.4265	-0.00065161	4.1949	0.0019162	2.7684	0.0012646	456.7936601394385	37.79	2.3589	37.801	37.33	39.689	0.011173					114	54	4	0	0	0	0.7932	1	2574	2574		24.203	0	1	2031500			64903	3856	43172	43190	73592	73592					0.10984716596760791
VVGAVELLL	9	Unmodified	_VVGAVELLL_					0	0	0		nc|ENSG00000133107|Q9UBN4-4|TRPC4;nc|ENSG00000133107|Q9UBN4-3|TRPC4;nc|ENSG00000133107|Q9UBN4-2|TRPC4;ENSG00000133107|ENST00000379705|TRPC4;nc|ENSG00000133107|Q9UBN4-5|TRPC4;nc|ENSG00000133107|Q9UBN4-7|TRPC4;nc|ENSG00000133107|Q9UBN4-6|TRPC4;ENSG00000072315|ENST00000262839|TRPC5	nc|ENSG00000133107|Q9UBN4-4|TRPC4	nc|ENSG00000133107|Q9UBN4-4|TRPC4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.791259765625	2	456.791861	911.569169	-0.14447	-6.5991E-05	2.4809	0.0011333	2.3364	0.0010673	456.79283636636444	42.399	2.3862	42.353	41.67	44.056	-0.045471					162	62	3	0	0	0	0.7932	1	2917	2917		19.36	0	1	605230			64904	3856	43172	43190	73593	73593					0.10984716596760791
VVGAVELLL	9	Unmodified	_VVGAVELLL_					0	0	0		nc|ENSG00000133107|Q9UBN4-4|TRPC4;nc|ENSG00000133107|Q9UBN4-3|TRPC4;nc|ENSG00000133107|Q9UBN4-2|TRPC4;ENSG00000133107|ENST00000379705|TRPC4;nc|ENSG00000133107|Q9UBN4-5|TRPC4;nc|ENSG00000133107|Q9UBN4-7|TRPC4;nc|ENSG00000133107|Q9UBN4-6|TRPC4;ENSG00000072315|ENST00000262839|TRPC5	nc|ENSG00000133107|Q9UBN4-4|TRPC4	nc|ENSG00000133107|Q9UBN4-4|TRPC4	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.7918395996094	2	456.791861	911.569169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.057	1	42.471	41.971	42.971	0.4139								0	0	0	0.28877	1	3724	3724		35.201	8.4046	1				64905	3856	43172	43190	73594	73594					0.10984716596760791
VVGGEEARPNS	11	Unmodified	_VVGGEEARPNS_					0	0	0		ENSG00000142615|ENST00000359621|CELA2A	ENSG00000142615|ENST00000359621|CELA2A	ENSG00000142615|ENST00000359621|CELA2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.7772827148438	2	557.778002	1113.54145	0.13504	7.532E-05	0.17971	0.00010024	0.31474	0.00017556	557.7777996045423	25.431	0.4968	25.39	25.152	25.649	-0.04117					29	14	3	0	0	0	0.61824	1	1073	1073		42.338	1.7655	1	71075			64906	4574	43173	43191	73595	73595					-0.010778384014201947
VVGGEEARPNS	11	Unmodified	_VVGGEEARPNS_					0	0	0		ENSG00000142615|ENST00000359621|CELA2A	ENSG00000142615|ENST00000359621|CELA2A	ENSG00000142615|ENST00000359621|CELA2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.7744140625	2	557.778002	1113.54145	0.97358	0.00054304	-0.62135	-0.00034658	0.35222	0.00019646	557.777462056533	25.415	0.56757	25.378	25.074	25.641	-0.037178					35	16	3	0	0	0	0.62614	1	1008	1008		41.427	9.8968	1	58348			64907	4574	43173	43191	73596	73596					-0.010778384014201947
VVGLKPYV	8	Unmodified	_VVGLKPYV_					0	0	0		ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1	ENSG00000111530|ENST00000545606|CAND1	ENSG00000111530|ENST00000545606|CAND1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.77142333984375	2	437.773471	873.53239	-1.5883	-0.00069529	-3.2181	-0.0014088	-4.8063	-0.0021041	437.7721217498353	37.964	1.695	37.98	37.611	39.306	0.016563					160	51	4	0	0	0	0.82464	1	2295	2295		21.702	1.2205	1	1227500			64908	2583	43174	43192	73597	73597					0.09056464770844741
VVGLKPYV	8	Unmodified	_VVGLKPYV_					0	0	0		ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1	ENSG00000111530|ENST00000545606|CAND1	ENSG00000111530|ENST00000545606|CAND1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7697448730469	2	437.773471	873.53239	-1.7749	-0.000777	-3.644	-0.0015953	-5.4189	-0.0023723	437.7717830608177	42.434	1.7664	42.867	42.22	43.986	0.4334					93	43	3	0	0	0	0.80963	2	3824	3776;3824		29.842	0	1	1098100			64909	2583	43174	43192	73598;73599	73599					0.09056464770844741
VVGLLLPN	8	Unmodified	_VVGLLLPN_					0	0	0		ENST00000416579.5_1_2:73200539-73298852:-|nuORF;ENSG00000144040|ENST00000272433|SFXN5;ENST00000474528.5_1_2:73172153-73286292:-|nuORF;ENST00000450185.5_1_2:73225858-73250341:-|nuORF	ENST00000416579.5_1_2:73200539-73298852:-|nuORF	ENST00000416579.5_1_2:73200539-73298852:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.76641845703125	2	412.765646	823.516739	0.16799	6.9342E-05	0.85459	0.00035274	1.0226	0.00042209	412.76662969775504	43.906	2.0769	43.88	42.796	44.873	-0.026764					88	48	2	0	0	0	0.87276	1	3421	3421		29.842	0	1	305480			64910	4684	43175	43193	73600	73600					0.0979217825380374
VVGLVENL	8	Unmodified	_VVGLVENL_					0	0	0		ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7518005371094	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.86288	1	7726	7726		26.796	5.0938	1	579450			64911	6237	43176	43194	73601	73601					0.06383284011531032
VVGNITLL	8	Unmodified	_VVGNITLL_					0	0	0		ENSG00000279270|ENST00000624978|OR52R1	ENSG00000279270|ENST00000624978|OR52R1	ENSG00000279270|ENST00000624978|OR52R1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	414.7616882324219	2	414.763104	827.511654	-1.1711	-0.00048571	-2.0434	-0.00084752	-3.2144	-0.0013332	414.7622083520732	88.685	2.6185	88.685	88.073	90.692	0					180	60	5	0	0	0	0.90465	2	8521	8521;8569		47.916	7.343	1	6770700			64912	9043	43177	43195	73602;73603	73602					0.09099874391188223
VVGNITLL	8	Unmodified	_VVGNITLL_					0	0	0		ENSG00000279270|ENST00000624978|OR52R1	ENSG00000279270|ENST00000624978|OR52R1	ENSG00000279270|ENST00000624978|OR52R1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	414.7617492675781	2	414.763104	827.511654	0.62314	0.00025846	-3.9205	-0.0016261	-3.2973	-0.0013676	414.7614350932437	88.34	2.6941	88.491	87.941	90.635	0.15054					199	63	6	0	0	0	0.91977	1	8743	8743		45.952	7.1458	1	10002000			64913	9043	43177	43195	73604	73604					0.09099874391188223
VVGPIFFLL	9	Unmodified	_VVGPIFFLL_					0	0	0			REV__nc|ENSG00000110148|P32239-3|CCKBR	REV__nc|ENSG00000110148|P32239-3|CCKBR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.81396484375	2	502.812596	1003.61064	-0.061598	-3.0972E-05	2.1756	0.0010939	2.114	0.0010629	502.81375645147	97.475	3.9537	97.532	96.775	100.73	0.056839					266	91	5	0	0	0	0.78292	1	10323	10323		29.842	3.0454	1	22149000	+		64914	17799	43178	43196	73605	73605					0.10897897356085195
VVGPIFFLL	9	Unmodified	_VVGPIFFLL_					0	0	0			REV__nc|ENSG00000110148|P32239-3|CCKBR	REV__nc|ENSG00000110148|P32239-3|CCKBR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	502.81402587890625	2	502.812596	1003.61064	-0.46142	-0.00023201	2.5587	0.0012866	2.0973	0.0010546	502.81389715137584	97.081	3.6095	97.312	96.652	100.26	0.23103					270	84	6	0	0	0	0.78292	1	10098	10098		29.842	7.8817	1	29832000	+		64915	17799	43178	43196	73606	73606					0.10897897356085195
VVGPIFFLL	9	Unmodified	_VVGPIFFLL_					0	0	0			REV__nc|ENSG00000110148|P32239-3|CCKBR	REV__nc|ENSG00000110148|P32239-3|CCKBR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	502.8139953613281	2	502.812596	1003.61064	1.0921	0.0005491	1.6154	0.00081223	2.7074	0.0013613	502.8134123573575	96.951	3.6734	97.356	96.802	100.47	0.40498					209	90	5	0	0	0	0.7932	1	11670	11670		21.702	0	1	10379000	+		64916	17799	43178	43196	73607	73607					0.10897897356085195
VVGQSVKL	8	Unmodified	_VVGQSVKL_					0	0	0			REV__ENST00000169298.7_1_3:186794834-186794918:+|nuORF	REV__ENST00000169298.7_1_3:186794834-186794918:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	414.26165771484375	2	415.260728	828.506903	0.012696	5.2722E-06	-3.4199	-0.0014202	-3.4072	-0.0014149	415.26001033109185	17.912	0.091057	17.975	17.934	18.025	0.062601					6	4	2	0	0	0	0.4196	1	282	282		24.203	6.8378	1	21007	+		64917	24080	43179	43197	73608	73608					0.08578990248417995
VVGRSEPIPV	10	Unmodified	_VVGRSEPIPV_					0	0	0		nc|ENSG00000197162|A8K8V0-2|ZNF785;ENSG00000197162|ENST00000395216|ZNF785	nc|ENSG00000197162|A8K8V0-2|ZNF785	nc|ENSG00000197162|A8K8V0-2|ZNF785	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.8075561523438	2	526.808574	1051.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.46	1	112.49	111.99	112.99	0.030602								0	0	0	0.45132	1	13601	13601		25.574	0	1				64918	8143	43180	43198	73609	73609					0.07885718368652306
VVGTIIVTA	9	Unmodified	_VVGTIIVTA_					0	0	0			REV__nc|ENSG00000144771|Q9HBL6-2|LRTM1	REV__nc|ENSG00000144771|Q9HBL6-2|LRTM1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	436.7730407714844	2	436.776211	871.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.911	1	26.911	26.411	27.411	0								0	0	0	0.35623	1	1049	1049		12.959	0	1		+		64919	19912	43181	43199	73610	73610					0.0969614356265538
VVGVAMLI	8	Unmodified	_VVGVAMLI_					0	0	0			REV__nc|ENSG00000107731|Q8IZJ1-2|UNC5B	REV__nc|ENSG00000107731|Q8IZJ1-2|UNC5B	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.2487487792969	2	401.248775	800.482997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.45	1	111.49	110.99	111.99	0.041832								0	0	0	0.29725	1	13482	13482		24.504	0	1		+		64920	17671	43182	43200	73611	73611					0.07477433490407748
VVGWMEGAHA	10	Unmodified	_VVGWMEGAHA_					0	0	0		ENST00000481170.1_1_2:220370207-220370552:+|nuORF	ENST00000481170.1_1_2:220370207-220370552:+|nuORF	ENST00000481170.1_1_2:220370207-220370552:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	528.748291015625	2	528.750201	1055.48585	-1.5168	-0.00080202	-2.2143	-0.0011708	-3.7311	-0.0019728	528.7488924032159	87.744	1.8146	87.913	87.394	89.208	0.16922					100	42	3	0	0	0	0.84112	1	8622	8622		37.159	2.9866	1	628110			64921	12454	43183	43201	73612	73612					-0.03967343122758393
VVHGKVLQH	9	Unmodified	_VVHGKVLQH_					0	0	0		ENSG00000109919|ENST00000302503|MTCH2;ENST00000539759.5_1_11:47639025-47663996:-|nuORF	ENSG00000109919|ENST00000302503|MTCH2	ENSG00000109919|ENST00000302503|MTCH2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	508.80340576171875	2	508.803626	1015.5927	0.71545	0.00036402	-0.9336	-0.00047502	-0.21815	-0.000111	508.8031099598377	19.238	0.45662	18.768	18.609	19.065	-0.46967					20	9	3	0	0	0	0.74721	2	494	494;508		37.159	1.9584	1	110190			64922	2492	43184	43202	73613;73614	73613					0.08552575153930775
VVHGKVLQH	9	Unmodified	_VVHGKVLQH_					0	0	0		ENSG00000109919|ENST00000302503|MTCH2;ENST00000539759.5_1_11:47639025-47663996:-|nuORF	ENSG00000109919|ENST00000302503|MTCH2	ENSG00000109919|ENST00000302503|MTCH2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	508.803626	1015.5927	0.84173	0.00042828	-0.97951	-0.00049838	-0.13778	-7.0102E-05	508.8030521593778	19.442	0.50159	18.812	18.62	19.122	-0.6296	0.022118	-2.8741E-05	NaN	37.159	19	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122620			64923	2492	43184	43202							0.08552575153930775
VVHTVRFS	8	Unmodified	_VVHTVRFS_					0	0	0		ENSG00000149573|ENST00000278937|MPZL2;ENST00000529376.5_1_11:118130767-118134958:-|nuORF	ENSG00000149573|ENST00000278937|MPZL2	ENSG00000149573|ENST00000278937|MPZL2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.76678466796875	2	472.769252	943.52395	-1.568	-0.00074129	-2.6998	-0.0012764	-4.2678	-0.0020177	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.86288	1	7985	7985		26.796	0	1	404330			64924	5036	43185	43203	73615	73615					0.04992910854230104
VVHVASRAT	9	Unmodified	_VVHVASRAT_					0	0	0		ENST00000587329.1_1_19:10909095-10913035:+|nuORF	ENST00000587329.1_1_19:10909095-10913035:+|nuORF	ENST00000587329.1_1_19:10909095-10913035:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.27276611328125	2	470.272158	938.529764	-1.0259	-0.00048243	0.96935	0.00045586	-0.056507	-2.6574E-05	470.27263416214146	92.531	3.2683	92.531	91.425	94.693	0					153	75	5	0	0	0	0.76996	1	9160	9160		33.516	4.366	1	1224900			64925	14188	43186	43204	73616	73616					0.05804009365908769
VVICIVLFV	9	Unmodified	_VVICIVLFV_					0	0	0			REV__nc|ENSG00000166145|O43278|SPINT1	REV__nc|ENSG00000166145|O43278|SPINT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	502.8138427734375	2	502.814282	1003.61401	-0.072215	-3.6311E-05	-1.2091	-0.00060793	-1.2813	-0.00064424	502.8137358537146	97.184	3.7296	97.233	96.655	100.38	0.048157					256	86	5	0	0	0	0.7932	2	10331	10331;10414		21.702	0	1	22931000	+		64926	21255	43187	43205	73617;73618	73617					0.11234824138421118
VVIEPLTKR	9	Unmodified	_VVIEPLTKR_					0	0	0			REV__ENST00000216471.4_1_14:77843568-77843751:+|nuORF	REV__ENST00000216471.4_1_14:77843568-77843751:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.8346557617188	2	527.834591	1053.65463	0.46908	0.0002476	-0.58613	-0.00030938	-0.11705	-6.1783E-05	527.8341669349551	30.059	0.91078	29.97	29.619	30.53	-0.089544					52	20	3	0	0	0	0.76255	1	1971	1971		35.618	0.41757	1	978200	+		64927	24135	43188	43206	73619	73619					0.12994881782401535
VVIEVIRFHI	10	Unmodified	_VVIEVIRFHI_					0	0	0			REV__nc|ENSG00000168594|Q9UKF5-2|ADAM29	REV__nc|ENSG00000168594|Q9UKF5-2|ADAM29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	408.92205810546875	3	408.920286	1223.73903	3.1807	0.0013007	1.6839	0.00068856	4.8646	0.0019892	408.92095568616344	104.57	4.1233	104.61	103.07	107.19	0.039856					288	98	5	0	0	0	0.86201	3	11349	11349;11360;11407		28.081	3.8497	1	4230400	+		64928	21503	43189	43207	73620;73621;73622	73620					0.1361083259919269
VVIEVIRFHI	10	Unmodified	_VVIEVIRFHI_					0	0	0			REV__nc|ENSG00000168594|Q9UKF5-2|ADAM29	REV__nc|ENSG00000168594|Q9UKF5-2|ADAM29	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	408.9222412109375	3	408.920286	1223.73903	0.73412	0.0003002	4.0803	0.0016685	4.8145	0.0019687	408.92190975649805	104.5	3.3645	104.62	103.39	106.76	0.11684					226	83	5	0	0	0	0.86201	2	11058	11058;11142		22.58	5.4129	1	4256600	+		64929	21503	43189	43207	73623;73624	73623					0.1361083259919269
VVIFPLHIVSN	11	Unmodified	_VVIFPLHIVSN_					0	0	0			REV__ENST00000453595.1_1_X:36980271-36981156:-|nuORF	REV__ENST00000453595.1_1_X:36980271-36981156:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.3709716796875	2	619.368798	1236.72304	1.27	0.0007866	3.6702	0.0022732	4.9402	0.0030598	619.3710394706492	101.41	0.94493	101.61	101.32	102.26	0.2058					77	22	4	0	0	0	0.7342	1	10633	10633		25.574	0	1	2074300	+		64930	26915	43190	43208	73625	73625					0.11415126362271621
VVIFTASA	8	Unmodified	_VVIFTASA_					0	0	0		nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-3|ALOX5;ENSG00000012779|ENST00000374391|ALOX5;ENST00000498461.1_1_10:45938876-45939636:+|nuORF	nc|ENSG00000012779|P09917-2|ALOX5	nc|ENSG00000012779|P09917-2|ALOX5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2318420410156	2	404.234179	806.453805	-1.2631	-0.0005106	-2.2404	-0.00090563	-3.5035	-0.0014162	404.2330856183434	82.529	2.4032	82.529	81.258	83.662	0					126	65	3	0	0	0	0.81548	1	7666	7666		20.482	0	1	248830			64931	803	43191	43209	73626	73626					0.04283612465758324
VVIFVVLEN	9	Unmodified	_VVIFVVLEN_					0	0	0			REV__ENSG00000170953|ENST00000306842|OR8B12	REV__ENSG00000170953|ENST00000306842|OR8B12	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.312744140625	2	516.310418	1030.60628	3.1033	0.0016022	4.4262	0.0022853	7.5295	0.0038875	516.312736387189	103.55	1.1906	103.5	102.99	104.18	-0.043755					71	28	3	0	0	0	0.76255	1	11352	11352		35.618	3.6634	1	574770	+		64932	21705	43192	43210	73627	73627					0.09220388142512093
VVIGVIVSP	9	Unmodified	_VVIGVIVSP_					0	0	0			REV__ENST00000531756.5_1_11:74862426-74914042:+|nuORF	REV__ENST00000531756.5_1_11:74862426-74914042:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	441.7876892089844	2	441.786579	881.558604	0.57903	0.00025581	2.1592	0.00095392	2.7383	0.0012097	441.7873800618457	44.666	2.4079	44.661	43.704	46.112	-0.0041618					134	57	3	0	0	0	0.7932	1	3497	3497		20.482	5.8177	1	493390	+		64933	19386	43193	43211	73628	73628					0.11308733942314575
VVIGVIVSP	9	Unmodified	_VVIGVIVSP_					0	0	0			REV__ENST00000531756.5_1_11:74862426-74914042:+|nuORF	REV__ENST00000531756.5_1_11:74862426-74914042:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7871398925781	2	441.786579	881.558604	0.23905	0.00010561	2.8432	0.0012561	3.0823	0.0013617	441.78765991436546	44.692	1.9456	44.741	43.916	45.861	0.048996					121	47	3	0	0	0	0.7932	1	3191	3191		25.45	1.2474	1	448230	+		64934	19386	43193	43211	73629	73629					0.11308733942314575
VVIGVIVSP	9	Unmodified	_VVIGVIVSP_					0	0	0			REV__ENST00000531756.5_1_11:74862426-74914042:+|nuORF	REV__ENST00000531756.5_1_11:74862426-74914042:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.7875671386719	2	441.786579	881.558604	-0.15151	-6.6935E-05	2.761	0.0012198	2.6095	0.0011529	441.7876460781076	41.617	3.1979	41.572	40.771	43.969	-0.045467					263	89	5	0	0	0	0.69914	1	2657	2657		40.573	0	1	10215000	+		64935	19386	43193	43211	73630	73630					0.11308733942314575
VVIKAVSS	8	Unmodified	_VVIKAVSS_					0	0	0		ENSG00000070388|ENST00000215530|FGF22	ENSG00000070388|ENST00000215530|FGF22	ENSG00000070388|ENST00000215530|FGF22	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	401.7547912597656	2	401.755278	801.496004	1.1928	0.00047921	-4.2899	-0.0017235	-3.0971	-0.0012443	401.7534449871872	26.484	1.2976	26.29	25.789	27.087	-0.19376					40	28	2	0	0	0	0.87922	1	1460	1460		31.955	7.7521	1	83484			64936	1240	43194	43212	73631	73631					0.08731587874137858
VVIKAVSS	8	Unmodified	_VVIKAVSS_					0	0	0		ENSG00000070388|ENST00000215530|FGF22	ENSG00000070388|ENST00000215530|FGF22	ENSG00000070388|ENST00000215530|FGF22	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	401.755278	801.496004	1.8717	0.00075198	-4.9449	-0.0019866	-3.0731	-0.0012346	401.7532559826723	26.595	1.3338	26.254	25.659	26.992	-0.34035	-0.017932	-0.00021656	NaN	31.955	48	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	122880			64937	1240	43194	43212							0.08731587874137858
VVIKLLPLKQV	11	Unmodified	_VVIKLLPLKQV_					0	0	0			REV__ENST00000519253.5_2_8:17849176-17851030:+|nuORF	REV__ENST00000519253.5_2_8:17849176-17851030:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.431396484375	2	625.433941	1248.85333	0.89312	0.00055859	-4.3604	-0.0027271	-3.4673	-0.0021685	625.43101086713	108.79	0.63013	108.82	108.61	109.24	0.034355					76	30	3	0	0	0	0.80813	1	11959	11959		5.9211	4.9242	1	3022200	+		64938	28075	43195	43213	73632	73632					0.23885722361251283
VVILARDVF	9	Unmodified	_VVILARDVF_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3135986328125	2	516.316035	1030.61752	-0.25527	-0.0001318	-3.4341	-0.0017731	-3.6894	-0.0019049	516.3141964907301	102.01	1.1313	102.2	101.89	103.02	0.19484					90	27	4	0	0	0	0.72402	1	10719	10719		38.806	0	1	1199700	+		64939	18222	43196	43214	73633	73633					0.10343210236646883
VVIPEASIL	9	Unmodified	_VVIPEASIL_					0	0	0			REV__nc|ENSG00000138468|Q9BQF6-2|SENP7	REV__nc|ENSG00000138468|Q9BQF6-2|SENP7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	470.7889709472656	2	470.789318	939.564084	-1.2872	-0.000606	2.6482	0.0012468	1.361	0.00064077	470.7904662555656	44.259	1.28	44.256	43.778	45.058	-0.002449					48	30	2	0	0	0	0.78851	1	3481	3481		28.254	1.4582	1	126510	+		64940	19477	43197	43215	73634	73634					0.09188412734147278
VVITKNRN	8	Unmodified	_VVITKNRN_					0	0	0		ENST00000589104.5_1_19:5070919-5151519:+|nuORF;nc|ENSG00000127663|O94953|KDM4B;ENSG00000127663|ENST00000159111|KDM4B	ENST00000589104.5_1_19:5070919-5151519:+|nuORF	ENST00000589104.5_1_19:5070919-5151519:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.2882080078125	2	472.287808	942.561064	-0.97076	-0.00045848	0.82719	0.00039067	-0.14357	-6.7805E-05	472.2881277613635	95.593	4.2164	95.593	94.965	99.182	0					275	99	6	0	0	0	0.8347	1	9707	9707		23.042	3.6825	1	26024000			64941	3512	43198	43216	73635	73635					0.08748582399982752
VVITTLTTL	9	Unmodified	_VVITTLTTL_					0	0	0		ENSG00000168830|ENST00000305344|HTR1E	ENSG00000168830|ENST00000305344|HTR1E	ENSG00000168830|ENST00000305344|HTR1E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8010559082031	2	480.802426	959.590298	-1.6775	-0.00080655	-1.6704	-0.00080313	-3.3479	-0.0016097	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.76996	1	9868	9868		33.516	1.5607	1	17379000			64942	6444	43199	43217	73636	73636					0.10888681905601061
VVITTRGKSA	10	Unmodified	_VVITTRGKSA_					0	0	0			REV__nc|ENSG00000004846|Q2M3G0-1|ABCB5	REV__nc|ENSG00000004846|Q2M3G0-1|ABCB5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.31396484375	2	516.314023	1030.61349	3.1012	0.0016012	-3.1554	-0.0016292	-0.054235	-2.8002E-05	516.3123085727266	112.87	7.7849	112.84	112.19	119.97	-0.024811					545	277	2	0	0	0	0.85438	1	13061	13061		16.473	0.83134	1	1162600	+		64943	16066	43200	43218	73637	73637					0.0994112074295117
VVITTRGKSA	10	Unmodified	_VVITTRGKSA_					0	0	0			REV__nc|ENSG00000004846|Q2M3G0-1|ABCB5	REV__nc|ENSG00000004846|Q2M3G0-1|ABCB5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3140258789062	2	516.314023	1030.61349	-1.5619	-0.00080641	1.5749	0.00081312	0.013001	6.7128E-06	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.8651	1	12605	12605		25.574	8.2091	1	4038100	+		64944	16066	43200	43218	73638	73638					0.0994112074295117
VVITVLDDGLE	11	Unmodified	_VVITVLDDGLE_					0	0	0		ENSG00000175426|ENST00000311106|PCSK1;nc|ENSG00000175426|P29120-2|PCSK1	ENSG00000175426|ENST00000311106|PCSK1	ENSG00000175426|ENST00000311106|PCSK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	586.8243408203125	2	586.824086	1171.63362	0.8875	0.00052081	-1.1185	-0.00065636	-0.23099	-0.00013555	586.8232786075841	110.16	1.2371	110.24	110.08	111.32	0.073685					109	41	4	0	0	0	0.68378	1	11839	11839		34.173	0	1	5645500			64945	7015	43201	43219	73639	73639					0.054668268922114294
VVIVVELSA	9	Unmodified	_VVIVVELSA_					0	0	0			REV__ENST00000574412.5_2_17:4642128-4642212:-|nuORF	REV__ENST00000574412.5_2_17:4642128-4642212:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.7904357910156	2	464.789318	927.564084	-0.072724	-3.3801E-05	3.0915	0.0014369	3.0188	0.0014031	464.79064225488247	34.657	2.0761	34.652	33.997	36.073	-0.0047417					115	49	3	0	0	0	0.7932	1	2074	2074		25.45	1.2474	1	297050	+		64946	28973	43202	43220	73640	73640					0.09740412734129222
VVKAGAPEL	9	Unmodified	_VVKAGAPEL_					0	0	0		ENSG00000100307|ENST00000216133|CBX7;ENST00000490741.1_1_22:39529898-39530769:-|nuORF	ENSG00000100307|ENST00000216133|CBX7	ENSG00000100307|ENST00000216133|CBX7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	442.2659912109375	2	442.26601	882.517468	0.69427	0.00030705	-0.25783	-0.00011403	0.43645	0.00019302	442.26575041604	37.447	1.2889	37.933	36.958	38.246	0.48581					72	31	4	0	0	0	0.55097	1	2992	2992		49.442	12.282	1	1479500			64947	1823	43203	43221	73641	73641					0.07150972902854846
VVKASRQLS	9	Unmodified	_VVKASRQLS_					0	0	0			REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	REV__nc|ENSG00000144535|Q8IYB7-3|DIS3L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.30096435546875	2	494.300916	986.587279	-1.6335	-0.00080746	1.1761	0.00058136	-0.4574	-0.0002261	494.3014668971879	97.21	3.9179	97.412	96.747	100.67	0.20207					363	90	6	0	0	0	0.7932	1	10058	10058		26.693	1.2427	1	46933000	+		64948	19897	43204	43222	73642	73642					0.09344851571484014
VVKATQAIYL	10	Unmodified	_VVKATQAIYL_					0	0	0		nc|ENSG00000119471|Q6YN16-2|HSDL2;ENSG00000119471|ENST00000398805|HSDL2	nc|ENSG00000119471|Q6YN16-2|HSDL2	nc|ENSG00000119471|Q6YN16-2|HSDL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.3296508789062	2	553.334424	1104.6543	-0.75754	-0.00041917	-2.8743	-0.0015905	-3.6319	-0.0020096	553.3326650229267	97.065	2.3757	97.127	96.565	98.941	0.062225					168	54	5	0	0	0	0.8651	1	10375	10375		25.574	1.0549	1	4355400			64949	3071	43205	43223	73643	73643					0.10615462062560255
VVKAVCPPQ	9	Unmodified	_VVKAVCPPQ_					0	0	0			REV__ENST00000474436.1_1_9:35096280-35096391:-|nuORF	REV__ENST00000474436.1_1_9:35096280-35096391:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.7666015625	2	470.767863	939.521173	-1.9239	-0.00090572	-1.5922	-0.00074958	-3.5162	-0.0016553	470.7669485875443	30.98	1.2869	30.98	30.322	31.609	0					85	47	2	0	0	0	0.74721	1	1464	1464		37.159	8.0096	1	93177	+		64950	27302	43206	43224	73644	73644					0.048993194050581224
VVKAVHWLPG	10	Unmodified	_VVKAVHWLPG_					0	0	0			REV__ENST00000476408.1_1_1:111422872-111441814:+|nuORF	REV__ENST00000476408.1_1_1:111422872-111441814:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.3314819335938	2	553.329476	1104.6444	0.8196	0.00045351	4.484	0.0024811	5.3036	0.0029346	553.3317918445606	96.793	1.7474	96.956	96.403	98.15	0.16317					118	40	4	0	0	0	0.85694	1	10060	10060		21.96	3.6978	1	2701500	+		64951	27331	43207	43225	73645	73645					0.09626318847836046
VVKCVRRK	8	Unmodified	_VVKCVRRK_					0	0	0		ENSG00000149575|ENST00000278947|SCN2B	ENSG00000149575|ENST00000278947|SCN2B	ENSG00000149575|ENST00000278947|SCN2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	494.3009948730469	2	494.315846	986.617139	0.76457	0.00037794	2.7015	0.0013354	3.4661	0.0017134	494.3172218991487	96.98	0.16241	97.371	97.241	97.403	0.39065					5	3	2	0	0	0	0.4196	1	11670	11670		40.573	29.062	1	100800			64952	5037	43208	43226	73646	73646					0.12329512035807966
VVKDSVRH	8	Unmodified	_VVKDSVRH_					0	0	0		nc|ENSG00000185585|Q68BL7-2|OLFML2A;ENSG00000185585|ENST00000373580|OLFML2A	nc|ENSG00000185585|Q68BL7-2|OLFML2A	nc|ENSG00000185585|Q68BL7-2|OLFML2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.2720947265625	2	470.272158	938.529764	-1.7118	-0.000805	1.6827	0.00079131	-0.029114	-1.3691E-05	470.2729404281299	92.166	2.8676	92.352	91.202	94.069	0.18582					129	67	3	0	0	0	0.85277	1	9252	9252		25.45	0	1	1756700			64953	7726	43209	43227	73647	73647					0.05804009365908769
VVKEYEMAIY	10	Unmodified	_VVKEYEMAIY_					0	0	0		ENSG00000196208|ENST00000381486|GREB1;nc|ENSG00000196208|Q4ZG55-4|GREB1	ENSG00000196208|ENST00000381486|GREB1	ENSG00000196208|ENST00000381486|GREB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	622.814453125	2	622.815207	1243.61586	-0.30607	-0.00019063	-1.8494	-0.0011518	-2.1555	-0.0013424	622.8139596261243	87.911	0.96681	88.375	88.06	89.027	0.46312					59	23	4	0	0	0	0.86471	1	10363	10363		30.318	1.1682	1	1677100			64954	8026	43210	43228	73648	73648					0.0037978836573984154
VVKGIISPV	9	Unmodified	_VVKGIISPV_					0	0	0		ENSG00000173614|ENST00000377205|NMNAT1	ENSG00000173614|ENST00000377205|NMNAT1	ENSG00000173614|ENST00000377205|NMNAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.30096435546875	2	456.299853	910.585153	-0.68927	-0.00031451	3.5345	0.0016128	2.8453	0.0012983	456.30128778001557	35.219	1.6098	35.163	34.768	36.378	-0.056385					101	36	5	0	0	0	0.78058	1	2280	2280		30.504	2.6214	1	710350			64955	6876	43211	43229	73649	73649					0.1262842283366581
VVKGIISPV	9	Unmodified	_VVKGIISPV_					0	0	0		ENSG00000173614|ENST00000377205|NMNAT1	ENSG00000173614|ENST00000377205|NMNAT1	ENSG00000173614|ENST00000377205|NMNAT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	456.30096435546875	2	456.299853	910.585153	-0.75416	-0.00034412	3.5877	0.0016371	2.8336	0.001293	456.3012900851617	35.065	1.7041	35.071	34.727	36.431	0.0063934					112	39	4	0	0	0	0.72402	1	2214	2214		38.806	3.6054	1	634200			64956	6876	43211	43229	73650	73650					0.1262842283366581
VVKGIISPV	9	Unmodified	_VVKGIISPV_					0	0	0		ENSG00000173614|ENST00000377205|NMNAT1	ENSG00000173614|ENST00000377205|NMNAT1	ENSG00000173614|ENST00000377205|NMNAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.30108642578125	2	456.299853	910.585153	0.18552	8.4654E-05	2.8375	0.0012948	3.0231	0.0013794	456.3010022539405	33.29	1.7406	33.257	32.935	34.675	-0.032681					212	75	4	0	0	0	0.7932	1	1614	1614		21.96	1.4781	1	1700700			64957	6876	43211	43229	73651	73651					0.1262842283366581
VVKGIISPV	9	Unmodified	_VVKGIISPV_					0	0	0		ENSG00000173614|ENST00000377205|NMNAT1	ENSG00000173614|ENST00000377205|NMNAT1	ENSG00000173614|ENST00000377205|NMNAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	456.301025390625	2	456.299853	910.585153	-0.23118	-0.00010549	2.4791	0.0011312	2.2479	0.0010257	456.30086790597977	45.013	2.0189	44.944	43.946	45.965	-0.068634					97	50	2	0	0	0	0.77546	2	3213	3213;3226		31.955	4.0726	1	498520			64958	6876	43211	43229	73652;73653	73652					0.1262842283366581
VVKGIISPV	9	Unmodified	_VVKGIISPV_					0	0	0		ENSG00000173614|ENST00000377205|NMNAT1	ENSG00000173614|ENST00000377205|NMNAT1	ENSG00000173614|ENST00000377205|NMNAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.30120849609375	2	456.299853	910.585153	1.12	0.00051105	1.6845	0.00076862	2.8045	0.0012797	456.3004764571391	34.144	1.6348	34.449	34.076	35.711	0.30495					98	40	4	0	0	0	0.78058	1	2525	2525		30.504	3.7075	1	1747200			64959	6876	43211	43229	73654	73654					0.1262842283366581
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	414.7616271972656	2	414.761761	827.508969	-1.1711	-0.00048571	1.1938	0.00049515	0.022757	9.4389E-06	414.7622083520732	88.685	2.6185	88.685	88.073	90.692	0					180	60	5	0	0	0	0.86791	2	8545	8545;8557		28.254	1.4582	1	6770700	+		64960	23324	43212	43230	73655;73656	73655					0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	414.76171875	2	414.761761	827.508969	-0.18703	-7.7573E-05	0.035233	1.4613E-05	-0.1518	-6.296E-05	414.7617349673395	88.474	3.4521	88.542	87.228	90.68	0.068161					244	80	5	0	0	0	0.86791	10	8979	8967;8979;8991;9003;9015;9027;9039;9052;9064;9076		44.531	15.382	1	13272000	+		64961	23324	43212	43230	73657;73658;73659;73660;73661;73662;73663;73664;73665;73666	73658					0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	414.76171875	2	414.761761	827.508969	1.1509	0.00047736	-1.3485	-0.00055931	-0.19758	-8.1948E-05	414.76116269619223	88.453	2.5747	88.379	87.811	90.386	-0.074005					210	60	5	0	0	0	0.81548	16	9362	9157;9167;9179;9191;9203;9215;9227;9239;9251;9264;9277;9301;9313;9326;9337;9362		35.201	14.719	1	17562000	+		64962	23324	43212	43230	73667;73668;73669;73670;73671;73672;73673;73674;73675;73676;73677;73678;73679;73680;73681;73682	73682					0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	414.7615661621094	2	414.761761	827.508969	3.0866	0.0012802	-3.3446	-0.0013872	-0.25794	-0.00010699	414.7603368537494	88.324	2.6249	88.374	87.726	90.351	0.050415					220	61	5	0	0	0	0.86791	16	9048	9025;9037;9048;9060;9072;9084;9097;9109;9121;9133;9169;9181;9194;9207;9219;9231		44.531	29.867	1	16914000	+		64963	23324	43212	43230	73683;73684;73685;73686;73687;73688;73689;73690;73691;73692;73693;73694;73695;73696;73697;73698	73685					0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	414.76171875	2	414.761761	827.508969	-1.8105	-0.00075094	1.7048	0.00070708	-0.10577	-4.3867E-05	414.7624144330171	88.215	3.3838	88.416	87.026	90.41	0.20114					235	79	5	0	0	0	0.86791	7	8707	8707;8718;8730;8766;8838;8850;8875		52.299	20.344	1	11466000	+		64964	23324	43212	43230	73699;73700;73701;73702;73703;73704;73705	73699					0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	414.7617492675781	2	414.761761	827.508969	0.62314	0.00025846	-0.68329	-0.0002834	-0.06014	-2.4944E-05	414.7614350932437	88.34	2.6941	88.491	87.941	90.635	0.15054					199	63	6	0	0	0	0.86791	7	8791	8732;8767;8779;8791;8816;8828;8840		52.299	13.493	1	10002000	+		64965	23324	43212	43230	73706;73707;73708;73709;73710;73711;73712	73709					0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	414.7617492675781	2	414.761761	827.508969	-1.9066	-0.00079078	1.9171	0.00079516	0.010558	4.3789E-06	414.7625113918511	88.263	2.5091	88.432	87.911	90.42	0.16923					168	58	4	0	0	0	0.86791	5	8677	8677;8698;8734;8748;8797		35.201	8.4046	1	7346500	+		64966	23324	43212	43230	73713;73714;73715;73716;73717	73713					0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.7616882324219	2	414.761761	827.508969	1.2689	0.00052628	-1.0912	-0.0004526	0.17762	7.3671E-05	414.7612423593211	88.129	2.1347	88.578	88.017	90.152	0.44893					145	51	4	0	0	0	0.86288	6	10445	10335;10382;10394;10420;10432;10445		44.531	14.027	1	6571000	+		64967	23324	43212	43230	73718;73719;73720;73721;73722;73723	73723					0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	414.7616882324219	2	414.761761	827.508969	2.7749	0.0011509	-2.5712	-0.0010664	0.2037	8.4487E-05	414.7606826252575	110.97	0.76537	111.03	110.67	111.43	0.054062					64	26	4	0	0	0	0.82464	2	13431	13431;13441		21.702	1.2205	1	498220	+		64968	23324	43212	43230	73724;73725	73724					0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	414.7620544433594	2	414.761761	827.508969	-1.0998	-0.00045617	1.2328	0.00051133	0.133	5.5163E-05	414.762210032181	88.155	2.0302	88.618	88.102	90.132	0.46312					152	49	4	0	0	0	0.86791	10	10385	10375;10385;10421;10433;10445;10457;10469;10481;10494;10532		52.299	28.096	1	10243000	+		64969	23324	43212	43230	73726;73727;73728;73729;73730;73731;73732;73733;73734;73735	73727					0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	414.761761	827.508969	3.0866	0.0012802	-3.3446	-0.0013872	-0.25794	-0.00010699	414.7603368537494	88.324	2.6249	88.374	87.726	90.351	0.050415	-0.12756	-0.0027142	NaN	35.201	220	61	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16914000	+		64970	23324	43212	43230							0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	414.761761	827.508969	-1.9066	-0.00079079	0.1735	7.1959E-05	-1.7331	-0.00071883	414.76262096981765	110.8	0.12944	110.8	110.76	110.89	-0.0074463	-0.15458	0.0029717	NaN	21.702	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14736	+		64971	23324	43212	43230							0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	414.761761	827.508969	2.7749	0.0011509	-2.5712	-0.0010664	0.2037	8.4487E-05	414.7606826252575	110.97	0.76537	111.03	110.67	111.43	0.054062	0.076719	0.00069495	NaN	21.702	64	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	498220	+		64972	23324	43212	43230							0.08831463776903092
VVKGRRGG	8	Unmodified	_VVKGRRGG_					0	0	0			REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	REV__ENST00000392900.3_1_7:143551228-143582358:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	414.761761	827.508969	5.7259	0.0023749	-5.8281	-0.0024173	-0.10227	-4.2416E-05	414.7594595135476	110.98	0.68652	111.03	110.73	111.42	0.049095	0.077861	-0.0020068	NaN	21.702	78	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	433800	+		64973	23324	43212	43230							0.08831463776903092
VVKGVKSMKAM	11	Unmodified	_VVKGVKSMKAM_					0	0	0			REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.343017578125	2	589.343412	1176.67227	-0.36759	-0.00021664	-0.40623	-0.00023941	-0.77382	-0.00045605	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.74763	1	9654	9654		22.58	2.5829	1	11103000	+		64974	21831	43213	43231	73736	73736					0.09100137721407009
VVKGVKSMKAM	11	Unmodified	_VVKGVKSMKAM_					0	0	0			REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3423461914062	2	589.343412	1176.67227	-0.67475	-0.00039766	-0.41121	-0.00024234	-1.086	-0.00064	589.3430225685556	92.504	2.9848	92.574	90.514	93.498	0.06987					241	71	4	0	0	0	0.64498	1	9666	9666		39.253	6.4404	1	5429300	+		64975	21831	43213	43231	73737	73737					0.09100137721407009
VVKGVKSMKAM	11	Unmodified	_VVKGVKSMKAM_					0	0	0			REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3419799804688	2	589.343412	1176.67227	-0.65315	-0.00038493	-0.48572	-0.00028626	-1.1389	-0.00067119	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.69995	1	9734	9734		31.53	1.2121	1	5584100	+		64976	21831	43213	43231	73738	73738					0.09100137721407009
VVKGVKSMKAM	11	Unmodified	_VVKGVKSMKAM_					0	0	0			REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3422241210938	2	589.343412	1176.67227	0.80964	0.00047716	-1.9306	-0.0011378	-1.121	-0.00066066	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.67778	1	9167	9167		35.152	7.2698	1	6634500	+		64977	21831	43213	43231	73739	73739					0.09100137721407009
VVKGVKSMKAM	11	Unmodified	_VVKGVKSMKAM_					0	0	0			REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3425903320312	2	589.343412	1176.67227	0.81285	0.00047905	-1.9839	-0.0011692	-1.1711	-0.00069018	589.3420821215354	92.202	2.9705	92.361	90.392	93.363	0.15875					235	71	4	0	0	0	0.7144	1	9320	9320		29.17	0	1	6450100	+		64978	21831	43213	43231	73740	73740					0.09100137721407009
VVKGVKSMKAM	11	Unmodified	_VVKGVKSMKAM_					0	0	0			REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.34228515625	2	589.343412	1176.67227	-1.324	-0.00078029	0.20732	0.00012219	-1.1167	-0.00065811	589.3433666290543	92.28	2.9059	92.466	90.479	93.385	0.18582					251	69	4	0	0	0	0.6921	2	9364	9219;9364		32.812	1.2121	1	5946500	+		64979	21831	43213	43231	73741;73742	73742					0.09100137721407009
VVKGVKSMKAM	11	Unmodified	_VVKGVKSMKAM_					0	0	0			REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	REV__ENST00000476939.5_1_1:60125899-60232874:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3438720703125	2	589.343412	1176.67227	-1.324	-0.0007803	0.42819	0.00025235	-0.89582	-0.00052795	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.72106	2	9903	9818;9903		28.081	1.9395	1	17904000	+		64980	21831	43213	43231	73743;73744	73744					0.09100137721407009
VVKHIRTYKQR	11	Unmodified	_VVKHIRTYKQR_					0	0	0		ENSG00000198807|ENST00000361487|PAX9	ENSG00000198807|ENST00000361487|PAX9	ENSG00000198807|ENST00000361487|PAX9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62347412109375	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.73621	1	12816	12816		25.126	7.2928	1	2577100			64981	8341	43214	43232	73745	73745					0.15574901045056322
VVKIEKPNFKP	11	Unmodified	_VVKIEKPNFKP_					0	0	0			REV__ENST00000433385.1_1_2:122416383-122416548:-|nuORF	REV__ENST00000433385.1_1_2:122416383-122416548:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	433.2557067871094	3	433.599212	1297.77581	-1.5553	-0.00067437	3.9864	0.0017285	2.4312	0.0010541	433.60104712229526	106.91	1.3985	107.06	106.6	108	0.14843					72	34	3	0	0	0	0.17375	1	11466	11466		13.508	0	1	946620	+		64982	26649	43215	43233	73746	73746					0.13883084425060588
VVKIFFSPIFL	11	Unmodified	_VVKIFFSPIFL_					0	0	0		ENST00000269919.10_1_19:18474522-18474831:+|nuORF	ENST00000269919.10_1_19:18474522-18474831:+|nuORF	ENST00000269919.10_1_19:18474522-18474831:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.2676696777344	3	437.268804	1308.78458	-0.040503	-1.7711E-05	-2.1267	-0.00092992	-2.1672	-0.00094763	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.76579	1	4209	4209		18.531	3.1979	1	2735300			64983	9550	43216	43234	73747	73747					0.14254058061555952
VVKIFFSPIFL	11	Unmodified	_VVKIFFSPIFL_					0	0	0		ENST00000269919.10_1_19:18474522-18474831:+|nuORF	ENST00000269919.10_1_19:18474522-18474831:+|nuORF	ENST00000269919.10_1_19:18474522-18474831:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.26800537109375	3	437.268804	1308.78458	-1.0895	-0.00047642	-1.1528	-0.00050409	-2.2424	-0.00098051	437.2682076309449	48.376	1.4718	48.845	48.119	49.591	0.46941					123	36	4	0	0	0	0.76251	1	4748	4748		19.263	0.73163	1	3096400			64984	9550	43216	43234	73748	73748					0.14254058061555952
VVKIFFSPIFL	11	Unmodified	_VVKIFFSPIFL_					0	0	0		ENST00000269919.10_1_19:18474522-18474831:+|nuORF	ENST00000269919.10_1_19:18474522-18474831:+|nuORF	ENST00000269919.10_1_19:18474522-18474831:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2677917480469	3	437.268804	1308.78458	0.02954	1.2917E-05	-2.2827	-0.00099817	-2.2532	-0.00098526	437.26770833059527	48.1	1.3181	49.023	48.466	49.784	0.92315					115	32	4	0	0	0	0.74405	1	4684	4684		23.378	2.3457	1	3276900			64985	9550	43216	43234	73749	73749					0.14254058061555952
VVKIIVSD	8	Unmodified	_VVKIIVSD_					0	0	0			REV__ENST00000491730.5_1_3:113251655-113300327:+|nuORF	REV__ENST00000491730.5_1_3:113251655-113300327:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	436.77490234375	2	436.776211	871.537869	-1.5113	-0.0006601	-1.5719	-0.00068657	-3.0832	-0.0013467	436.7754295082816	90.617	2.9564	90.834	89.74	92.696	0.21736					214	70	5	0	0	0	0.85277	1	9044	9044		25.45	6.0902	1	13819000	+		64986	16661	43217	43235	73750	73750					0.0969614356265538
VVKISSSN	8	Unmodified	_VVKISSSN_					0	0	0			REV__ENSG00000166801|ENST00000675163|FAM111A	REV__ENSG00000166801|ENST00000675163|FAM111A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	417.2393493652344	2	417.239993	832.465432	1.1488	0.00047933	-3.1805	-0.001327	-2.0317	-0.00084772	417.2384906610176	88.485	2.0585	88.411	87.855	89.913	-0.074005					110	48	3	0	0	0	0.8621	1	9210	9210		26.693	0	1	1559000	+		64987	21321	43218	43236	73751	73751					0.04249809489101608
VVKKFLDTGL	10	Unmodified	_VVKKFLDTGL_					0	0	0		ENST00000342992.10_3_2:179403377-179403708:-|nuORF	ENST00000342992.10_3_2:179403377-179403708:-|nuORF	ENST00000342992.10_3_2:179403377-179403708:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3406982421875	2	560.342249	1118.66995	0.39666	0.00022227	-4.1426	-0.0023213	-3.7459	-0.002099	560.3399034928755	102.04	3.4939	102.24	101.58	105.08	0.19484					369	86	7	0	0	0	0.86763	1	10677	10677		26.693	1.1189	1	135510000			64988	10273	43219	43237	73752	73752					0.11535748579581195
VVKKHPQF	8	Unmodified	_VVKKHPQF_					0	0	0		nc|ENSG00000282100|Q58FF6|HSP90AB4P	nc|ENSG00000282100|Q58FF6|HSP90AB4P	nc|ENSG00000282100|Q58FF6|HSP90AB4P	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.796142578125	2	491.795269	981.575986	-0.035071	-1.7248E-05	1.1757	0.00057819	1.1406	0.00056094	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.86288	1	4874	4874		26.796	0	1	1625300			64989	15320	43220	43238	73753	73753					0.08446074267988024
VVKKIKKL	8	Unmodified	_VVKKIKKL_					0	0	0			REV__ENST00000606198.5_1_6:28109763-28116190:+|nuORF	REV__ENST00000606198.5_1_6:28109763-28116190:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2774963378906	2	478.354963	954.695373	0.13462	6.4394E-05	-3.914	-0.0018723	-3.7794	-0.0018079	478.3530066421201	83.486	0.80151	83.917	83.659	84.461	0.43108					40	18	3	0	0	0	0.4196	1	9680	9680		20.482	0	1	558830	+		64990	29368	43221	43239	73754	73754					0.216212678927036
VVKKIKKL	8	Unmodified	_VVKKIKKL_					0	0	0			REV__ENST00000606198.5_1_6:28109763-28116190:+|nuORF	REV__ENST00000606198.5_1_6:28109763-28116190:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2799377441406	2	478.354963	954.695373	0.18302	8.7549E-05	-2.9647	-0.0014182	-2.7817	-0.0013306	478.3533668106056	84.364	0.19338	84.799	84.666	84.859	0.43538					5	4	2	0	0	0	0.4196	1	9814	9814		4.6817	0	1	38462	+		64991	29368	43221	43239	73755	73755					0.216212678927036
VVKKKKFK	8	Unmodified	_VVKKKKFK_					0	0	0		nc|ENSG00000053918|P51787-2|KCNQ1;ENSG00000053918|ENST00000155840|KCNQ1	nc|ENSG00000053918|P51787-2|KCNQ1	nc|ENSG00000053918|P51787-2|KCNQ1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	502.8139343261719	2	502.852587	1003.69062	-0.46308	-0.00023286	3.6772	0.0018491	3.2142	0.0016162	502.8542943691695	97	0.12435	97.231	97.126	97.25	0.23103					4	2	2	0	0	0	0.4196	1	10000	10000		4.6817	4.6817	1	78975			64992	1013	43222	43240	73756	73756					0.1889238374993738
VVKKKKFK	8	Unmodified	_VVKKKKFK_					0	0	0		nc|ENSG00000053918|P51787-2|KCNQ1;ENSG00000053918|ENST00000155840|KCNQ1	nc|ENSG00000053918|P51787-2|KCNQ1	nc|ENSG00000053918|P51787-2|KCNQ1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	502.852587	1003.69062	-1.6057	-0.00080743	6.9121	0.0034758	5.3064	0.0026683	502.8566499971637	97.088	0.24857	97.29	97.227	97.475	0.20207	0.029304	0.0016024	NaN	4.6817	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41064			64993	1013	43222	43240							0.1889238374993738
VVKKKLFL	8	Unmodified	_VVKKKLFL_					0	0	0			REV__ENSG00000168564|ENST00000504169|CDKN2AIP	REV__ENSG00000168564|ENST00000504169|CDKN2AIP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.84100341796875	2	487.841688	973.668823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118	1	118.09	117.59	118.59	0.087753								0	0	0	0.30784	1	12467	12467		14.664	5.8418	1		+		64994	21501	43223	43241	73757	73757					0.18093579001345006
VVKKKRRA	8	Unmodified	_VVKKKRRA_					0	0	0			REV__nc|ENSG00000134717|Q96K17-3|BTF3L4	REV__nc|ENSG00000134717|Q96K17-3|BTF3L4	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.8409423828125	2	492.843085	983.671617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.08	1	116.17	115.67	116.67	0.094063								0	0	0	0.31173	1	12349	12349		8.8223	0	1		+		64995	19160	43224	43242	73758	73758					0.179128471788772
VVKKKSEQLHN	11	Unmodified	_VVKKKSEQLHN_					0	0	0		ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2568664550781	3	437.257738	1308.75138	-1.4866	-0.00065002	0.58687	0.00025661	-0.89971	-0.00039341	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.69071	1	10400	10400		33.039	1.0053	1	981430			64996	6988	43225	43243	73759	73759					0.10935824271564343
VVKKLCKV	8	Unmodified	_VVKKLCKV_					0	0	0		ENST00000373358.7_2_X:75397480-75397852:+|nuORF	ENST00000373358.7_2_X:75397480-75397852:+|nuORF	ENST00000373358.7_2_X:75397480-75397852:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	458.7872009277344	2	458.804248	915.593944	-1.123	-0.00051523	1.7907	0.00082157	0.6677	0.00030634	458.8042381890327	92.816	0.44203	93.042	92.915	93.357	0.22548					14	10	2	0	0	0	0.4196	1	9425	9425		13.775	12.68	1	120510			64997	10743	43226	43244	73760	73760					0.13277073198480593
VVKKLFTPYT	10	Unmodified	_VVKKLFTPYT_					0	0	0		ENSG00000203668|ENST00000366553|CHML	ENSG00000203668|ENST00000366553|CHML	ENSG00000203668|ENST00000366553|CHML	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.855712890625	2	598.357899	1194.70125	1.6651	0.0009963	0.63902	0.00038236	2.3041	0.0013787	598.3583175004217	94.283	4.5904	94.715	93.221	97.812	0.4324					199	114	2	0	0	0	0.86218	2	11200	11183;11200		32.812	7.2384	1	27623000			64998	8388	43227	43245	73761;73762	73762					0.11168321613718035
VVKKMQYYGK	10	Unmodified	_VVKKMQYYGK_					0	0	0			REV__nc|ENSG00000165025|P43405-2|SYK	REV__nc|ENSG00000165025|P43405-2|SYK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	622.3471069335938	2	622.347009	1242.67946	0.8786	0.00054679	-0.90799	-0.00056509	-0.029395	-1.8294E-05	622.346539275879	95.975	2.7711	96.138	95.071	97.843	0.16317					131	65	3	0	0	0	0.8608	1	9826	9826		34.173	6.2903	1	486240	+		64999	21139	43228	43246	73763	73763					0.0678319359346915
VVKKYKKKL	9	Unmodified	_VVKKYKKKL_					0	0	0			REV__nc|ENSG00000139697|A3KN83-3|SBNO1	REV__nc|ENSG00000139697|A3KN83-3|SBNO1	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3294677734375	2	567.392077	1132.7696	-0.50594	-0.00028706	3.5894	0.0020366	3.0834	0.0017495	567.8947200193838	93.297	0.12711	93.297	93.199	93.326	0					4	2	2	0	0	0	0.20789	1	9192	9192		12.207	5.0135	1	56118	+		65000	19562	43229	43247	73764	73764					0.20852610984206876
VVKLGNRAAVH	11	Unmodified	_VVKLGNRAAVH_					0	0	0			REV__nc|ENSG00000065413|Q8N8A2-2|ANKRD44	REV__nc|ENSG00000065413|Q8N8A2-2|ANKRD44	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.3538208007812	2	582.354014	1162.69348	-0.28407	-0.00016543	-0.53009	-0.0003087	-0.81416	-0.00047413	582.3535950018216	103.7	3.7542	103.7	103.22	106.98	0					405	89	7	0	0	0	0.6921	1	10601	10601		32.812	1.2826	1	61091000	+		65001	16499	43230	43248	73765	73765					0.1186360713677459
VVKLGNRAAVH	11	Unmodified	_VVKLGNRAAVH_					0	0	0			REV__nc|ENSG00000065413|Q8N8A2-2|ANKRD44	REV__nc|ENSG00000065413|Q8N8A2-2|ANKRD44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.353515625	2	582.354014	1162.69348	-1.3468	-0.00078429	0.41376	0.00024096	-0.93299	-0.00054333	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.6921	1	11243	11243		32.812	3.6424	1	120000000	+		65002	16499	43230	43248	73766	73766					0.1186360713677459
VVKLSRWR	8	Unmodified	_VVKLSRWR_					0	0	0		ENST00000369393.7_1_6:90428144-90428192:-|nuORF	ENST00000369393.7_1_6:90428144-90428192:-|nuORF	ENST00000369393.7_1_6:90428144-90428192:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.3031005859375	2	522.327268	1042.63998	0.30386	0.00015871	2.0419	0.0010665	2.3457	0.0012252	522.3282691283039	85.174	0.87773	85.614	85.108	85.986	0.43967					34	21	2	0	0	0	0.4196	1	9970	9970		31.955	14.59	1	301380			65003	10616	43231	43249	73767	73767					0.12036854424923149
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2669372558594	2	412.765646	823.516739	-1.8807	-0.00077628	3.6658	0.0015131	1.7851	0.00073681	412.7675411441033	40.04	1.7541	40.04	39.19	40.944	0					139	50	4	0	0	0	0.86288	1	2706	2706		26.796	5.0938	1	795210	+		65004	21931	43232	43250	73768	73768					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2662658691406	2	412.765646	823.516739	-1.8516	-0.00076429	3.7329	0.0015408	1.8812	0.0007765	412.76770415918054	41.801	3.886	41.801	40.853	44.739	0					194	100	4	0	0	0	0.85277	2	2789	2789;2851		28.254	6.5519	1	681490	+		65005	21931	43232	43250	73769;73770	73769					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	412.7669372558594	2	412.765646	823.516739	-1.7927	-0.00073995	4.3385	0.0017908	2.5459	0.0010508	412.76798042268337	46.08	2.981	46.08	44.739	47.72	0					190	86	3	0	0	0	0.82658	1	3408	3408		21.96	7.2958	1	706370	+		65006	21931	43232	43250	73771	73771					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7669372558594	2	412.765646	823.516739	-0.024773	-1.0226E-05	2.7576	0.0011383	2.7329	0.001128	412.7671753724154	37.892	4.8812	37.868	35.596	40.477	-0.023979					267	113	4	0	0	0	0.85277	1	2441	2441		25.45	3.7478	1	1546000	+		65007	21931	43232	43250	73772	73772					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7667541503906	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.374	1	40.343	39.843	40.843	-0.030991								0	0	0	0.29452	1	2872	2872		33.516	0	1		+		65008	21931	43232	43250	73773	73773					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.7670593261719	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.58	1	40.549	40.049	41.049	-0.030991								0	0	0	0.30316	1	2901	2901		42.474	0	1		+		65009	21931	43232	43250	73774	73774					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	412.76678466796875	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.671	1	42.641	42.141	43.141	-0.029461								0	0	0	0.3037	1	3202	3202		18.324	0	1		+		65010	21931	43232	43250	73775	73775					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.766845703125	2	412.765646	823.516739	-1.3459	-0.00055553	3.4065	0.0014061	2.0606	0.00085056	412.76701040612045	40.372	1.7448	40.328	39.579	41.324	-0.043694					94	45	3	0	0	0	0.84634	2	2943	2943;3027		60.294	10.269	1	625910	+		65011	21931	43232	43250	73776;73777	73776					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2675476074219	2	412.765646	823.516739	0.89086	0.00036771	2.3668	0.00097695	3.2577	0.0013447	412.7667639455288	37.779	2.8407	37.79	36.302	39.143	0.011173					188	64	4	0	0	0	0.80706	1	2618	2618		19.36	3.7238	1	2034000	+		65012	21931	43232	43250	73778	73778					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	413.2679748535156	2	412.765646	823.516739	1.0742	0.00044338	1.0077	0.00041595	2.0819	0.00085933	412.7659693172007	40.207	1.4192	40.217	39.687	41.106	0.0092812					79	35	3	0	0	0	0.884	3	2951	2907;2943;2951		47.916	14.4	1	573960	+		65013	21931	43232	43250	73779;73780;73781	73781					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.7668151855469	2	412.765646	823.516739	1.4126	0.00058306	1.8694	0.00077163	3.282	0.0013547	412.7662658707051	42.038	1.4358	42.042	41.461	42.897	0.003418					59	34	2	0	0	0	0.884	1	3187	3187		33.516	5.2613	1	683700	+		65014	21931	43232	43250	73782	73782					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	412.7674560546875	2	412.765646	823.516739	-1.8992	-0.00078392	4.1525	0.001714	2.2533	0.0009301	412.76765198426614	41.794	3.0272	41.798	40.935	43.962	0.0043983					161	84	4	0	0	0	0.82419	3	2752	2752;2876;2905		33.516	1.3402	1	640430	+		65015	21931	43232	43250	73783;73784;73785	73783					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.76702880859375	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.344	1	37.443	36.943	37.943	0.099277								0	0	0	0.29353	1	2135	2135		28.254	6.5519	1		+		65016	21931	43232	43250	73786	73786					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7668762207031	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.852	1	39.941	39.441	40.441	0.088375								0	0	0	0.30045	1	2479	2479		40.573	0	1		+		65017	21931	43232	43250	73787	73787					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7670593261719	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.937	1	40.019	39.519	40.519	0.082478								0	0	0	0.29245	1	2491	2491		30.504	0.6621	1		+		65018	21931	43232	43250	73788	73788					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.766845703125	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.014	1	40.096	39.596	40.596	0.081345								0	0	0	0.29344	1	2502	2502		31.955	2.1133	1		+		65019	21931	43232	43250	73789	73789					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7663269042969	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.667	1	43.724	43.224	44.224	0.056744								0	0	0	0.30609	1	3028	3028		44.531	5.5096	1		+		65020	21931	43232	43250	73790	73790					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	412.7666320800781	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.084	1	44.137	43.637	44.637	0.052773								0	0	0	0.29816	1	3086	3086		38.806	5.2906	1		+		65021	21931	43232	43250	73791	73791					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2681884765625	2	412.765646	823.516739	-0.12416	-5.1249E-05	3.4038	0.001405	3.2797	0.0013537	412.76712899172674	37.708	2.2952	37.65	36.776	39.071	-0.057915					205	69	4	0	0	0	0.87479	1	2247	2247		30.504	0	1	1619400	+		65022	21931	43232	43250	73792	73792					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76690673828125	2	412.765646	823.516739	-0.21056	-8.6912E-05	2.569	0.0010604	2.3584	0.00097348	412.76685422643334	40.116	1.6377	40.068	39.082	40.719	-0.04789					115	51	3	0	0	0	0.884	1	2482	2482		33.516	3.0119	1	699640	+		65023	21931	43232	43250	73793	73793					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.76788330078125	2	412.765646	823.516739	-0.27553	-0.00011373	3.043	0.0012561	2.7675	0.0011423	412.7670260631251	41.732	1.84	41.687	41.143	42.983	-0.045467					110	50	4	0	0	0	0.85277	1	2877	2877		25.45	0	1	818920	+		65024	21931	43232	43250	73794	73794					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	412.7663269042969	2	412.765646	823.516739	-0.33758	-0.00013934	2.1313	0.00087971	1.7937	0.00074037	412.7669144536039	43.714	1.8956	43.657	42.672	44.567	-0.056812					93	46	3	0	0	0	0.86791	1	3066	3066		28.254	0	1	313210	+		65025	21931	43232	43250	73795	73795					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	413.2698669433594	2	412.765646	823.516739	-0.52852	-0.00021815	2.9286	0.0012088	2.4001	0.00099068	412.76723094642836	48.755	3.2946	48.662	47.534	50.828	-0.093178					192	86	3	0	0	0	0.86791	1	3678	3678		28.254	2.8041	1	594400	+		65026	21931	43232	43250	73796	73796					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	412.767333984375	2	412.765646	823.516739	-0.47942	-0.00019789	3.3109	0.0013666	2.8315	0.0011687	412.7670483281277	39.807	1.8963	40.175	38.803	40.699	0.36797					121	45	4	0	0	0	0.85277	1	3269	3269		25.45	1.2474	1	816160	+		65027	21931	43232	43250	73797	73797					0.0979217825380374
VVKLTAPP	8	Unmodified	_VVKLTAPP_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	412.76708984375	2	412.765646	823.516739	1.2488	0.00051545	2.3587	0.00097359	3.6075	0.001489	412.7664969922496	36.891	1.9427	37.376	36.231	38.174	0.48581					136	47	4	0	0	0	0.85277	1	2925	2925		25.45	0	1	3061300	+		65028	21931	43232	43250	73798	73798					0.0979217825380374
VVKMDLGLL	9	Unmodified	_VVKMDLGLL_					0	0	0		nc|ENSG00000170381|O15041-2|SEMA3E;ENSG00000170381|ENST00000643230|SEMA3E	nc|ENSG00000170381|O15041-2|SEMA3E	nc|ENSG00000170381|O15041-2|SEMA3E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3008728027344	2	494.298996	986.583439	-0.58723	-0.00029027	4.0172	0.0019857	3.43	0.0016955	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.51307	3	10042	10024;10042;10291		51.335	5.3632	1	65263000			65029	6580	43233	43251	73799;73800;73801	73800					0.08961045753392227
VVKNERYTF	9	Unmodified	_VVKNERYTF_					0	0	0		nc|ENSG00000198055|P43250-3|GRK6;ENSG00000198055|ENST00000355472|GRK6;nc|ENSG00000198055|P43250-2|GRK6	nc|ENSG00000198055|P43250-3|GRK6	nc|ENSG00000198055|P43250-3|GRK6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	578.3102416992188	2	578.31148	1154.60841	-0.93812	-0.00054253	-0.66211	-0.00038291	-1.6002	-0.00092543	578.3108872469597	110.42	1.9343	110.36	110.1	112.04	-0.055077					205	66	5	0	0	0	0.7932	1	12081	12081		19.997	0	1	3649700			65030	8230	43234	43252	73802	73802					0.037288168803115695
VVKNGTLRG	9	Unmodified	_VVKNGTLRG_					0	0	0			REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.2875061035156	2	472.287808	942.561064	-0.91682	-0.000433	0.58763	0.00027753	-0.3292	-0.00015548	472.28801379538055	95.057	4.2284	95.288	94.569	98.797	0.23103					373	99	6	0	0	0	0.78983	1	9748	9748		27.882	0	1	50946000	+		65031	19889	43235	43253	73803	73803					0.08748582400005489
VVKNIADIIQR	11	Unmodified	_VVKNIADIIQR_					0	0	0			REV__nc|ENSG00000163359|P12111-2|COL6A3	REV__nc|ENSG00000163359|P12111-2|COL6A3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	634.8930053710938	2	634.887887	1267.76122	2.7957	0.0017749	4.3447	0.0027584	7.1403	0.0045333	634.8907719409685	105.88	2.8545	105.84	105.02	107.87	-0.03714					272	67	6	0	0	0	0.58425	3	11661	11661;11908;11919		45.972	6.1195	1	42597000	+		65032	20903	43236	43254	73804;73805;73806	73804					0.1380501227693003
VVKNTERGV	9	Unmodified	_VVKNTERGV_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2904357910156	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.76764	1	8848	8848		34.173	6.2903	1	9883700			65033	5268	43237	43255	73807	73807					0.06628261191804086
VVKNTERGV	9	Unmodified	_VVKNTERGV_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2903747558594	2	501.290548	1000.56654	-0.36653	-0.00018374	0.15869	7.9552E-05	-0.20784	-0.00010419	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.74721	1	8789	8789		37.159	2.9866	1	9903700			65034	5268	43237	43255	73808	73808					0.06628261191804086
VVKNTERGV	9	Unmodified	_VVKNTERGV_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.29034423828125	2	501.290548	1000.56654	-0.50311	-0.0002522	0.25574	0.0001282	-0.24737	-0.000124	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.74721	1	8488	8488		37.159	2.9866	1	10459000			65035	5268	43237	43255	73809	73809					0.06628261191804086
VVKNTHFL	8	Unmodified	_VVKNTHFL_					0	0	0		ENSG00000165997|ENST00000377275|ARL5B	ENSG00000165997|ENST00000377275|ARL5B	ENSG00000165997|ENST00000377275|ARL5B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2779235839844	2	479.279452	956.544351	-1.0919	-0.00052333	-3.0273	-0.0014509	-4.1192	-0.0019742	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.87922	2	8144	8144;8314		40.573	5.2619	1	4644500			65036	6146	43238	43256	73810;73811	73810					0.0643408151404401
VVKNTHFL	8	Unmodified	_VVKNTHFL_					0	0	0		ENSG00000165997|ENST00000377275|ARL5B	ENSG00000165997|ENST00000377275|ARL5B	ENSG00000165997|ENST00000377275|ARL5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.27734375	2	479.279452	956.544351	-0.93682	-0.000449	-3.4908	-0.001673	-4.4276	-0.002122	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.89494	1	8214	8214		37.159	8.0096	1	2046100			65037	6146	43238	43256	73812	73812					0.0643408151404401
VVKNTHFL	8	Unmodified	_VVKNTHFL_					0	0	0		ENSG00000165997|ENST00000377275|ARL5B	ENSG00000165997|ENST00000377275|ARL5B	ENSG00000165997|ENST00000377275|ARL5B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773742675781	2	479.279452	956.544351	-0.77651	-0.00037216	-3.5504	-0.0017016	-4.3269	-0.0020738	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.87922	1	8435	8435		31.955	2.8053	1	7040000			65038	6146	43238	43256	73813	73813					0.0643408151404401
VVKNTHFL	8	Unmodified	_VVKNTHFL_					0	0	0		ENSG00000165997|ENST00000377275|ARL5B	ENSG00000165997|ENST00000377275|ARL5B	ENSG00000165997|ENST00000377275|ARL5B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2773742675781	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.87064	1	8093	8093		29.15	1.2673	1	7438100			65039	6146	43238	43256	73814	73814					0.0643408151404401
VVKNTHFL	8	Unmodified	_VVKNTHFL_					0	0	0		ENSG00000165997|ENST00000377275|ARL5B	ENSG00000165997|ENST00000377275|ARL5B	ENSG00000165997|ENST00000377275|ARL5B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2784729003906	2	479.279452	956.544351	-0.95082	-0.00045571	-3.0433	-0.0014586	-3.9941	-0.0019143	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.85277	2	9868	9868;9977		31.955	2.8053	1	6350300			65040	6146	43238	43256	73815;73816	73815					0.0643408151404401
VVKNTLVLTY	10	Unmodified	_VVKNTLVLTY_					0	0	0			REV__nc|ENSG00000273085|Q8NGJ3|OR52E1	REV__nc|ENSG00000273085|Q8NGJ3|OR52E1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.345458984375	2	575.347532	1148.68051	-0.3799	-0.00021857	-2.6981	-0.0015524	-3.078	-0.0017709	575.3459117588899	98.957	2.3582	98.957	98.457	100.82	0					160	56	5	0	0	0	0.86218	2	10033	9985;10033		32.812	4.2543	1	2637800	+		65041	30264	43239	43257	73817;73818	73818					0.1121173123403878
VVKNTLVLTY	10	Unmodified	_VVKNTLVLTY_					0	0	0			REV__nc|ENSG00000273085|Q8NGJ3|OR52E1	REV__nc|ENSG00000273085|Q8NGJ3|OR52E1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.3455810546875	2	575.347532	1148.68051	-1.0089	-0.00058045	0.10463	6.0201E-05	-0.90424	-0.00052025	575.3486096870474	98.837	5.2928	98.887	98.351	103.64	0.04982					239	125	5	0	0	0	0.86218	2	10461	10461;10485		32.812	0.96095	1	4222200	+		65042	30264	43239	43257	73819;73820	73819					0.1121173123403878
VVKNTLVLTY	10	Unmodified	_VVKNTLVLTY_					0	0	0			REV__nc|ENSG00000273085|Q8NGJ3|OR52E1	REV__nc|ENSG00000273085|Q8NGJ3|OR52E1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.345703125	2	575.347532	1148.68051	0.97571	0.00056137	-4.2468	-0.0024434	-3.2711	-0.001882	575.3449806461122	98.555	2.3295	98.603	98.055	100.38	0.048157					165	53	5	0	0	0	0.86218	1	10559	10559		32.812	4.9302	1	4316200	+		65043	30264	43239	43257	73821	73821					0.1121173123403878
VVKNTLVLTY	10	Unmodified	_VVKNTLVLTY_					0	0	0			REV__nc|ENSG00000273085|Q8NGJ3|OR52E1	REV__nc|ENSG00000273085|Q8NGJ3|OR52E1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.3447265625	2	575.347532	1148.68051	-1.3696	-0.00078799	-2.033	-0.0011697	-3.4026	-0.0019577	575.3462227460456	98.573	2.415	98.769	98.2	100.61	0.19585					159	55	5	0	0	0	0.86218	3	10209	10161;10183;10209		32.812	3.4483	1	2256700	+		65044	30264	43239	43257	73822;73823;73824	73824					0.1121173123403878
VVKNVPML	8	Unmodified	_VVKNVPML_					0	0	0			REV__ENST00000497765.1_1_3:183515808-183519351:+|nuORF	REV__ENST00000497765.1_1_3:183515808-183519351:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27435302734375	2	450.272781	898.531009	1.7291	0.00077856	1.6772	0.00075519	3.4063	0.0015338	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.884	1	9952	9952		33.516	3.0119	1	51820000	+		65045	20987	43240	43258	73825	73825					0.07768507410446546
VVKPASQAAM	10	Unmodified	_VVKPASQAAM_					0	0	0			REV__ENST00000495554.1_1_1:153606776-153609130:+|nuORF	REV__ENST00000495554.1_1_1:153606776-153609130:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2903747558594	2	501.276052	1000.53755	-0.36857	-0.00018476	1.9075	0.00095616	1.5389	0.00077141	501.27707637566573	87.191	0.47598	87.244	86.908	87.384	0.053032					12	10	2	0	0	0	0.37624	1	8897	8897		37.812	7.3079	1	70468	+		65046	20729	43241	43259	73826	73826					0.03730400571157588
VVKPKVFSTT	10	Unmodified	_VVKPKVFSTT_					0	0	0		nc|ENSG00000117245|Q9P2E2|KIF17;ENSG00000117245|ENST00000400463|KIF17	nc|ENSG00000117245|Q9P2E2|KIF17	nc|ENSG00000117245|Q9P2E2|KIF17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.3327026367188	2	553.334424	1104.6543	-1.4413	-0.00079751	-2.1828	-0.0012078	-3.6241	-0.0020053	553.3330646195122	96.766	2.0734	96.968	96.488	98.561	0.20207					140	47	5	0	0	0	0.86272	1	9920	9920		24.519	0.99649	1	2490200			65047	2968	43242	43260	73827	73827					0.10615462062560255
VVKPLRAFFS	10	Unmodified	_VVKPLRAFFS_					0	0	0		ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.3524780273438	2	582.350409	1162.68626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.98	1	113.96	113.46	114.46	-0.024452								0	0	0	0.45132	1	12619	12619		21.96	2.8564	1				65048	6107	43243	43261	73828	73828					0.1114287453635825
VVKPTAERTAH	11	Unmodified	_VVKPTAERTAH_					0	0	0		ENST00000548656.2_1_14:19411434-19411701:-|nuORF	ENST00000548656.2_1_14:19411434-19411701:-|nuORF	ENST00000548656.2_1_14:19411434-19411701:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.57476806640625	3	403.56305	1207.66732	-0.11412	-4.6056E-05	-3.0657	-0.0012372	-3.1798	-0.0012833	403.894648938678	81.862	0.2701	82.361	82.149	82.419	0.49967					8	6	2	0	0	0	0.15663	1	9490	9490		55.721	20.543	1	47434			65049	13621	43244	43262	73829	73829					0.07179293174658596
VVKQSGIIN	9	Unmodified	_VVKQSGIIN_					0	0	0			REV__ENSG00000130508|ENST00000252804|PXDN	REV__ENSG00000130508|ENST00000252804|PXDN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2798767089844	2	479.290017	956.565481	-0.83008	-0.00039785	1.3259	0.0006355	0.49585	0.00023765	479.29051904057184	85.295	0.51466	85.48	85.361	85.876	0.18523					16	11	3	0	0	0	0.20789	1	8351	8351		32.812	10.853	1	45412	+		65050	18878	43245	43263	73830	73830					0.08546046822903008
VVKQVTGRD	9	Unmodified	_VVKQVTGRD_					0	0	0			REV__ENSG00000075223|ENST00000265361|SEMA3C	REV__ENSG00000075223|ENST00000265361|SEMA3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29034423828125	2	501.290548	1000.56654	0.83893	0.00042055	-1.2098	-0.00060644	-0.37083	-0.00018589	501.28983449008786	84.389	3.0903	84.319	82.409	85.499	-0.069313					260	71	5	0	0	0	0.71772	1	8705	8705		39.253	10.083	1	2850500	+		65051	16705	43246	43264	73831	73831					0.06628261191792717
VVKQVTGRD	9	Unmodified	_VVKQVTGRD_					0	0	0			REV__ENSG00000075223|ENST00000265361|SEMA3C	REV__ENSG00000075223|ENST00000265361|SEMA3C	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29058837890625	2	501.290548	1000.56654	1.1291	0.00056599	-1.3314	-0.0006674	-0.20229	-0.00010141	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.76764	1	9161	9161		34.173	0	1	9883700	+		65052	16705	43246	43264	73832	73832					0.06628261191792717
VVKRAGPPTPQ	11	Unmodified	_VVKRAGPPTPQ_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.3402709960938	2	575.340572	1148.66659	-0.77132	-0.00044377	0.66457	0.00038235	-0.10675	-6.1418E-05	575.3408323014936	39.083	0.98392	39.053	38.538	39.522	-0.03027					45	22	3	0	0	0	0.41445	1	2691	2691		58.246	1.8125	1	230080	+		65053	23503	43247	43265	73833	73833					0.09820498525596122
VVKRAGPPTPQ	11	Unmodified	_VVKRAGPPTPQ_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.3397827148438	2	575.340572	1148.66659	-1.4031	-0.00080726	1.4395	0.00082822	0.036418	2.0953E-05	575.341163197935	38.821	0.945	38.832	38.358	39.303	0.011173					51	21	3	0	0	0	0.3308	1	2691	2691		66.962	6.8437	1	287500	+		65054	23503	43247	43265	73834	73834					0.09820498525596122
VVKRAGPPTPQ	11	Unmodified	_VVKRAGPPTPQ_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	575.340572	1148.66659	-0.77132	-0.00044377	0.66457	0.00038235	-0.10675	-6.1418E-05	575.3408323014936	39.083	0.98392	39.053	38.538	39.522	-0.03027	0.15856	-0.00032197	NaN	66.962	45	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	230080	+		65055	23503	43247	43265							0.09820498525596122
VVKRAGPPTPQ	11	Unmodified	_VVKRAGPPTPQ_					0	0	0			REV__ENSG00000204560|ENST00000376442|DHX16	REV__ENSG00000204560|ENST00000376442|DHX16	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	575.340572	1148.66659	-1.4031	-0.00080726	1.4395	0.00082822	0.036418	2.0953E-05	575.341163197935	38.821	0.945	38.832	38.358	39.303	0.011173	-0.061878	0.00056976	NaN	66.962	51	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	287500	+		65056	23503	43247	43265							0.09820498525596122
VVKRFGDPE	9	Unmodified	_VVKRFGDPE_					0	0	0			REV__ENST00000521314.5_1_16:67198707-67203685:+|nuORF	REV__ENST00000521314.5_1_16:67198707-67203685:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3034057617188	2	523.785099	1045.55564	0.71863	0.00037641	-2.7868	-0.0014597	-2.0682	-0.0010833	523.7839128832985	88.67	0.95833	88.821	88.523	89.482	0.15055					28	22	2	0	0	0	0.20789	1	8869	8869		27.882	7.4004	1	110070	+		65057	28115	43248	43266	73835	73835					0.03468858817518594
VVKRFGYMN	9	Unmodified	_VVKRFGYMN_					0	0	0			REV__nc|ENSG00000025156|Q03933-2|HSF2;REV__ENSG00000102878|ENST00000521374|HSF4	REV__ENSG00000102878|ENST00000521374|HSF4	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.8292846679688	2	557.297319	1112.58008	3.096	0.0017254	-0.99607	-0.00055511	2.0999	0.0011703	557.2967406943455	101.1	0.81979	101.05	100.67	101.49	-0.052116					29	19	2	0	0	0	0.20789	1	10985	10985		25.45	0	1	127360	+		65058	16256;17366	43249	43267	73836	73836					0.02829795699403803
VVKRIERPPTG	11	Unmodified	_VVKRIERPPTG_					0	0	0			REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.3790893554688	2	626.380229	1250.7459	-0.052383	-3.2812E-05	-0.93966	-0.00058858	-0.99204	-0.0006214	626.37951872247	106.01	2.3248	106.01	105.2	107.53	0					262	53	6	0	0	0	0.67778	2	11047	11047;11108		35.152	1.2304	1	37510000	+		65059	27156	43250	43268	73837;73838	73837					0.1305614547973164
VVKRIERPPTG	11	Unmodified	_VVKRIERPPTG_					0	0	0			REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3796997070312	2	626.380229	1250.7459	-0.22979	-0.00014393	-0.741	-0.00046415	-0.97079	-0.00060808	626.3796521317021	105.9	2.4813	105.88	105.06	107.54	-0.025146					298	58	6	0	0	0	0.60687	1	11707	11707		43.651	4.8972	1	47647000	+		65060	27156	43250	43268	73839	73839					0.1305614547973164
VVKRIERPPTG	11	Unmodified	_VVKRIERPPTG_					0	0	0			REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3797607421875	2	626.380229	1250.7459	2.9096	0.0018225	-3.8515	-0.0024125	-0.94186	-0.00058996	626.377711482176	105.86	2.6957	105.82	104.89	107.59	-0.03714					304	63	6	0	0	0	0.59831	1	11660	11660		35.152	0	1	48616000	+		65061	27156	43250	43268	73840	73840					0.1305614547973164
VVKRIERPPTG	11	Unmodified	_VVKRIERPPTG_					0	0	0			REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3792114257812	2	626.380229	1250.7459	0.93883	0.00058807	-1.8374	-0.0011509	-0.89857	-0.00056285	626.3789780788948	105.75	2.6569	105.79	104.95	107.61	0.038322					312	62	6	0	0	0	0.65746	1	11701	11701		37.812	6.1772	1	47947000	+		65062	27156	43250	43268	73841	73841					0.1305614547973164
VVKRIERPPTG	11	Unmodified	_VVKRIERPPTG_					0	0	0			REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	626.3800048828125	2	626.380229	1250.7459	1.3741	0.00086073	-2.3075	-0.0014454	-0.93335	-0.00058463	626.3786910858371	105.48	2.5428	105.64	104.92	107.46	0.15924					334	63	6	0	0	0	0.67778	1	11476	11476		35.152	4.8343	1	79850000	+		65063	27156	43250	43268	73842	73842					0.1305614547973164
VVKRIERPPTG	11	Unmodified	_VVKRIERPPTG_					0	0	0			REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	417.9223327636719	3	417.922578	1250.7459	-1.8945	-0.00079175	1.1534	0.00048205	-0.74105	-0.0003097	417.92301973502657	105.61	2.7753	105.68	104.89	107.66	0.073112					226	67	4	0	0	0	0.7434	1	11177	11177		33.039	17.119	1	18308000	+		65064	27156	43250	43268	73843	73843					0.1305614547973164
VVKRIERPPTG	11	Unmodified	_VVKRIERPPTG_					0	0	0			REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	REV__ENST00000467324.5_1_2:122513466-122522940:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	417.92230224609375	3	417.922578	1250.7459	2.409	0.0010068	-3.2333	-0.0013513	-0.82426	-0.00034448	417.9211491012133	105.29	1.9486	105.45	104.96	106.91	0.15584					170	67	4	0	0	0	0.76892	1	12821	12821		17.833	0	1	526200	+		65065	27156	43250	43268	73844	73844					0.1305614547973164
VVKRRHALSA	10	Unmodified	_VVKRRHALSA_					0	0	0			REV__ENST00000331334.4_1_14:96000938-96001127:+|nuORF	REV__ENST00000331334.4_1_14:96000938-96001127:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.8539428710938	2	568.854181	1135.69381	-1.1637	-0.000662	-0.61846	-0.00035181	-1.7822	-0.0010138	568.8537556102825	102.43	3.5452	102.45	101.9	105.45	0.01989					358	85	6	0	0	0	0.8608	1	11224	11224		34.173	6.2903	1	50786000	+		65066	25124	43251	43269	73845	73845					0.1313902685665198
VVKSFMKPNK	10	Unmodified	_VVKSFMKPNK_					0	0	0			REV__ENST00000366663.9_1_1:230975176-230975578:-|nuORF	REV__ENST00000366663.9_1_1:230975176-230975578:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3423461914062	2	589.341726	1176.6689	0.80964	0.00047716	0.92916	0.00054759	1.7388	0.0010247	589.3421175581336	92.167	3.0481	92.388	90.347	93.395	0.22157					243	73	4	0	0	0	0.86763	1	9179	9179		26.693	0	1	6634500	+		65067	25531	43252	43270	73846	73846					0.08763210939059718
VVKSLSPKEL	10	Unmodified	_VVKSLSPKEL_					0	0	0		nc|ENSG00000178202|Q7Z4H8-3|POGLUT3;nc|ENSG00000178202|Q7Z4H8-2|POGLUT3;ENSG00000178202|ENST00000323468|POGLUT3	nc|ENSG00000178202|Q7Z4H8-3|POGLUT3	nc|ENSG00000178202|Q7Z4H8-3|POGLUT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.3388061523438	2	550.339707	1098.66486	-0.22959	-0.00012635	-3.3734	-0.0018565	-3.603	-0.0019828	550.3381660592913	16.331	0.22	15.844	15.739	15.959	-0.48718					10	4	3	0	0	0	0.85981	1	120	120		35.152	2.3396	1	207470			65068	7192	43253	43271	73847	73847					0.1194744471699778
VVKSLSPKEL	10	Unmodified	_VVKSLSPKEL_					0	0	0		nc|ENSG00000178202|Q7Z4H8-3|POGLUT3;nc|ENSG00000178202|Q7Z4H8-2|POGLUT3;ENSG00000178202|ENST00000323468|POGLUT3	nc|ENSG00000178202|Q7Z4H8-3|POGLUT3	nc|ENSG00000178202|Q7Z4H8-3|POGLUT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.3382568359375	2	550.339707	1098.66486	0.23778	0.00013086	-3.802	-0.0020924	-3.5642	-0.0019615	550.3381200890778	16.319	0.27673	15.72	15.601	15.878	-0.59873					11	5	3	0	0	0	0.86272	1	118	118		24.519	1.4767	1	215900			65069	7192	43253	43271	73848	73848					0.1194744471699778
VVKSYAGAN	9	Unmodified	_VVKSYAGAN_					0	0	0			REV__nc|ENSG00000131238|P50897-2|PPT1	REV__nc|ENSG00000131238|P50897-2|PPT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	454.7450866699219	2	454.745442	907.476331	0.75875	0.00034504	-1.8682	-0.00084954	-1.1094	-0.0005045	454.7444452036616	103.95	1.168	104.06	103.62	104.79	0.11684					52	28	3	0	0	0	0.7932	1	11022	11022		23.042	0	1	321450	+		65070	18941	43254	43272	73849	73849					0.01889211863363016
VVKTDRRGT	9	Unmodified	_VVKTDRRGT_					0	0	0			REV__ENSG00000062822|ENST00000440232|POLD1	REV__ENSG00000062822|ENST00000440232|POLD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3138427734375	2	516.301447	1030.58834	-0.047301	-2.4422E-05	-2.7046	-0.0013964	-2.7519	-0.0014208	516.3001911506021	99.745	0.25204	99.786	99.711	99.963	0.0411					8	5	3	0	0	0	0.20789	1	10617	10617		39.253	20.928	1	196900	+		65071	16465	43255	43273	73850	73850					0.07427065940373723
VVKTHLFTG	9	Unmodified	_VVKTHLFTG_					0	0	0			REV__ENSG00000196911|ENST00000368564|KPNA5	REV__ENSG00000196911|ENST00000368564|KPNA5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2906799316406	2	501.292559	1000.57057	-0.94239	-0.00047241	-3.1642	-0.0015862	-4.1066	-0.0020586	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.69624	2	8281	8185;8281		40.778	3.6191	1	6939200	+		65072	23178	43256	43274	73851;73852	73852					0.07030350685533904
VVKTHLFTG	9	Unmodified	_VVKTHLFTG_					0	0	0			REV__ENSG00000196911|ENST00000368564|KPNA5	REV__ENSG00000196911|ENST00000368564|KPNA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2903747558594	2	501.292559	1000.57057	-0.52377	-0.00026256	-3.845	-0.0019275	-4.3688	-0.00219	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.67345	1	8633	8633		42.396	3.1433	1	2929300	+		65073	23178	43256	43274	73853	73853					0.07030350685533904
VVKTHLFTG	9	Unmodified	_VVKTHLFTG_					0	0	0			REV__ENSG00000196911|ENST00000368564|KPNA5	REV__ENSG00000196911|ENST00000368564|KPNA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2904052734375	2	501.292559	1000.57057	-0.50311	-0.0002522	-3.7566	-0.0018832	-4.2597	-0.0021354	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.78536	1	8392	8392		29.15	1.2673	1	10459000	+		65074	23178	43256	43274	73854	73854					0.07030350685533904
VVKTHLFTG	9	Unmodified	_VVKTHLFTG_					0	0	0			REV__ENSG00000196911|ENST00000368564|KPNA5	REV__ENSG00000196911|ENST00000368564|KPNA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2906799316406	2	501.292559	1000.57057	-1.5697	-0.00078686	-2.6476	-0.0013272	-4.2173	-0.0021141	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.69624	2	8849	8505;8849		40.778	12.524	1	9242300	+		65075	23178	43256	43274	73855;73856	73856					0.07030350685533904
VVKTKDTIW	9	Unmodified	_VVKTKDTIW_					0	0	0			REV__nc|ENSG00000070182|P11277-3|SPTB	REV__nc|ENSG00000070182|P11277-3|SPTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3170166015625	2	545.318774	1088.623	-0.0069207	-3.774E-06	-3.655	-0.0019931	-3.6619	-0.0019969	545.3166425063828	88.28	2.4247	88.729	87.35	89.775	0.44892					193	58	4	0	0	0	0.76764	1	10520	10520		34.173	1.3601	1	4868200	+		65076	16597	43257	43275	73857	73857					0.08222889028479585
VVKVFALAAN	10	Unmodified	_VVKVFALAAN_					0	0	0		CON__Q2UVX4	CON__Q2UVX4	CON__Q2UVX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3128051757812	2	516.316035	1030.61752	-1.5618	-0.0008064	-1.828	-0.00094385	-3.3899	-0.0017503	516.315128223729	103.33	1.0546	103.45	103.07	104.12	0.11494					63	26	3	0	0	0	0.86218	1	10845	10845		32.812	8.6097	1	813320		+	65077	616	43258	43276	73858	73858					0.10343210236646883
VVKVFALAAN	10	Unmodified	_VVKVFALAAN_					0	0	0		CON__Q2UVX4	CON__Q2UVX4	CON__Q2UVX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.31396484375	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.8608	1	12226	12226		34.173	7.4796	1	4038100		+	65078	616	43258	43276	73859	73859					0.10343210236646883
VVKVFSLAVN	10	Unmodified	_VVKVFSLAVN_					0	0	0		ENSG00000125730|ENST00000245907|C3;ENST00000598805.2_1_19:6686670-6693093:-|nuORF	ENSG00000125730|ENST00000245907|C3	ENSG00000125730|ENST00000245907|C3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	538.32666015625	2	538.329142	1074.64373	-0.15636	-8.4174E-05	-4.0212	-0.0021647	-4.1776	-0.0022489	538.3269075153179	101.16	2.8222	101.19	100.44	103.26	0.031036					310	67	7	0	0	0	0.8545	2	10790	10790;11005		36.447	4.4919	1	74691000			65079	3409	43259	43277	73860;73861	73860					0.10939479408125408
VVKVFSLAVN	10	Unmodified	_VVKVFSLAVN_					0	0	0		ENSG00000125730|ENST00000245907|C3;ENST00000598805.2_1_19:6686670-6693093:-|nuORF	ENSG00000125730|ENST00000245907|C3	ENSG00000125730|ENST00000245907|C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3268432617188	2	538.329142	1074.64373	0.070633	3.8024E-05	-4.4231	-0.0023811	-4.3525	-0.0023431	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.8545	3	10759	10638;10759;10870		36.447	5.9431	1	109840000			65080	3409	43259	43277	73862;73863;73864	73863					0.10939479408125408
VVKVFSLAVN	10	Unmodified	_VVKVFSLAVN_					0	0	0		ENSG00000125730|ENST00000245907|C3;ENST00000598805.2_1_19:6686670-6693093:-|nuORF	ENSG00000125730|ENST00000245907|C3	ENSG00000125730|ENST00000245907|C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3268432617188	2	538.329142	1074.64373	-1.4901	-0.00080219	-2.8806	-0.0015507	-4.3708	-0.0023529	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.86106	1	10725	10725		33.922	1.1092	1	93615000			65081	3409	43259	43277	73865	73865					0.10939479408125408
VVKVFSLAVN	10	Unmodified	_VVKVFSLAVN_					0	0	0		ENSG00000125730|ENST00000245907|C3;ENST00000598805.2_1_19:6686670-6693093:-|nuORF	ENSG00000125730|ENST00000245907|C3	ENSG00000125730|ENST00000245907|C3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.326416015625	2	538.329142	1074.64373	-1.4902	-0.00080219	-1.8971	-0.0010213	-3.3873	-0.0018235	538.3280902070636	104.45	1.1656	104.54	103.95	105.11	0.093857					91	28	4	0	0	0	0.86587	1	11106	11106		29.17	4.6509	1	1209800			65082	3409	43259	43277	73866	73866					0.10939479408125408
VVKVFTAKSP	10	Unmodified	_VVKVFTAKSP_					0	0	0			REV__ENSG00000105726|ENST00000357324|ATP13A1	REV__ENSG00000105726|ENST00000357324|ATP13A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3269653320312	2	538.329142	1074.64373	0.070633	3.8024E-05	-4.4231	-0.0023811	-4.3525	-0.0023431	538.326761944055	100.81	4.0756	101.02	99.972	104.05	0.2058					349	99	6	0	0	0	0.86348	1	10976	10976		31.53	2.3598	1	109840000	+		65083	17565	43260	43278	73867	73867					0.10939479408125408
VVKVFTAKSP	10	Unmodified	_VVKVFTAKSP_					0	0	0			REV__ENSG00000105726|ENST00000357324|ATP13A1	REV__ENSG00000105726|ENST00000357324|ATP13A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.32763671875	2	538.329142	1074.64373	-1.4901	-0.00080219	-2.8806	-0.0015507	-4.3708	-0.0023529	538.3275641798145	100.83	2.9278	101	100.24	103.16	0.17151					316	71	6	0	0	0	0.8545	1	10796	10796		36.447	0.82846	1	93615000	+		65084	17565	43260	43278	73868	73868					0.10939479408125408
VVKVFTAKSP	10	Unmodified	_VVKVFTAKSP_					0	0	0			REV__ENSG00000105726|ENST00000357324|ATP13A1	REV__ENSG00000105726|ENST00000357324|ATP13A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3270263671875	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.86272	1	12856	12856		24.519	1.4767	1	4041000	+		65085	17565	43260	43278	73869	73869					0.10939479408125408
VVKVGENVLPP	11	Unmodified	_VVKVGENVLPP_					0	0	0		nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;ENSG00000117523|ENST00000647382|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8427124023438	2	575.845156	1149.67576	-1.368	-0.00078773	-2.557	-0.0014725	-3.925	-0.0022602	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.61369	2	9359	9298;9359		42.864	5.7052	1	6121300			65086	2984	43261	43279	73870;73871	73871					0.10690847091291289
VVKVGENVLPP	11	Unmodified	_VVKVGENVLPP_					0	0	0		nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;ENSG00000117523|ENST00000647382|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.8428955078125	2	575.845156	1149.67576	-1.6501	-0.00095021	-2.5974	-0.0014957	-4.2475	-0.0024459	575.8434791868526	90.193	1.8473	90.663	90.18	92.028	0.47068					146	46	4	0	0	0	0.61369	1	10813	10813		42.864	3.6114	1	1810000			65087	2984	43261	43279	73872	73872					0.10690847091291289
VVKVIHLKP	9	Unmodified	_VVKVIHLKP_					0	0	0			REV__ENSG00000169504|ENST00000374379|CLIC4	REV__ENSG00000169504|ENST00000374379|CLIC4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2879638671875	2	516.850045	1031.68554	-0.37737	-0.00019504	2.0509	0.00106	1.6735	0.00086496	517.3536429322079	59.32	0.2647	59.873	59.733	59.998	0.55323					9	6	2	0	0	0	0.20789	1	6269	6269		18.324	4.5491	1	107280	+		65088	21581	43262	43280	73873	73873					0.1709607988730113
VVKVKGQILMF	11	Oxidation (M)	_VVKVKGQILM(Oxidation (M))F_		VVKVKGQILM(1)F		VVKVKGQILM(58)F	0	0	1			REV__ENSG00000163482|ENST00000295709|STK36	REV__ENSG00000163482|ENST00000295709|STK36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	426.5942687988281	3	426.593181	1276.75771	1.4588	0.00062231	1.6264	0.00069382	3.0852	0.0013161	426.5938475594282	33.45	1.3653	33.448	33.012	34.377	-0.0016327					74	30	4	0	0	0	0.41445	1	1961	1961		58.246	7.455	1	453100	+		65089	20920	43263	43281	73874	73874		312			0.13040626178712955
VVKVRGEGN	9	Unmodified	_VVKVRGEGN_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.2774353027344	2	479.277441	956.540328	-1.0919	-0.00052333	1.1694	0.00056045	0.077457	3.7124E-05	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.78536	1	7900	7900		29.15	0	1	4644500	+		65090	22270	43264	43282	73875	73875					0.060319920203255606
VVKVRGEGN	9	Unmodified	_VVKVRGEGN_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2773132324219	2	479.277441	956.540328	-0.098244	-4.7086E-05	0.019792	9.4859E-06	-0.078452	-3.76E-05	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.78983	1	8427	8427		27.882	1.0861	1	6799600	+		65091	22270	43264	43282	73876	73876					0.060319920203255606
VVKVRGEGN	9	Unmodified	_VVKVRGEGN_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2774353027344	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.7932	2	8140	8140;8236		26.693	1.1189	1	7438100	+		65092	22270	43264	43282	73877;73878	73877					0.060319920203255606
VVKVRGEGN	9	Unmodified	_VVKVRGEGN_					0	0	0			REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	REV__ENST00000471162.5_1_3:49044864-49051550:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2784729003906	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.78536	1	9857	9857		29.15	0	1	6350300	+		65093	22270	43264	43282	73879	73879					0.060319920203255606
VVKVRIEYT	9	Unmodified	_VVKVRIEYT_					0	0	0			REV__nc|ENSG00000112335|O60493-2|SNX3	REV__nc|ENSG00000112335|O60493-2|SNX3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.830810546875	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.76255	1	8959	8959		35.618	10.044	1	3935500	+		65094	29782	43265	43283	73880	73880					0.10094577919790026
VVKVRIEYT	9	Unmodified	_VVKVRIEYT_					0	0	0			REV__nc|ENSG00000112335|O60493-2|SNX3	REV__nc|ENSG00000112335|O60493-2|SNX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8298950195312	2	553.832049	1105.64954	0.27729	0.00015357	-4.0078	-0.0022196	-3.7305	-0.0020661	553.8296850017343	88.378	2.8651	88.585	86.735	89.6	0.2073					222	67	4	0	0	0	0.67345	2	8785	8666;8785		42.396	11.892	1	1844500	+		65095	29782	43265	43283	73881;73882	73882					0.10094577919790026
VVKVRIEYT	9	Unmodified	_VVKVRIEYT_					0	0	0			REV__nc|ENSG00000112335|O60493-2|SNX3	REV__nc|ENSG00000112335|O60493-2|SNX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8299560546875	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.71772	2	9059	9059;9202		39.253	2.0937	1	6402500	+		65096	29782	43265	43283	73883;73884	73883					0.10094577919790026
VVKVRIEYT	9	Unmodified	_VVKVRIEYT_					0	0	0			REV__nc|ENSG00000112335|O60493-2|SNX3	REV__nc|ENSG00000112335|O60493-2|SNX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.829833984375	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.64922	3	8800	8765;8800;8812		44.117	11.892	1	2008100	+		65097	29782	43265	43283	73885;73886;73887	73886					0.10094577919790026
VVKVRIEYT	9	Unmodified	_VVKVRIEYT_					0	0	0			REV__nc|ENSG00000112335|O60493-2|SNX3	REV__nc|ENSG00000112335|O60493-2|SNX3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	553.8301391601562	2	553.832049	1105.64954	-1.4397	-0.00079733	-1.9435	-0.0010764	-3.3831	-0.0018737	553.8308364085414	90.397	3.7363	90.573	89.476	93.212	0.1758					318	88	4	0	0	0	0.69624	1	8908	8908		40.778	5.6261	1	5453100	+		65098	29782	43265	43283	73888	73888					0.10094577919790026
VVKVRIEYT	9	Unmodified	_VVKVRIEYT_					0	0	0			REV__nc|ENSG00000112335|O60493-2|SNX3	REV__nc|ENSG00000112335|O60493-2|SNX3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.830078125	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.76764	1	10889	10889		34.173	1.422	1	5911200	+		65099	29782	43265	43283	73889	73889					0.10094577919790026
VVKVVRSYL	9	Unmodified	_VVKVVRSYL_					0	0	0			REV__ENSG00000115423|ENST00000389394|DNAH6	REV__ENSG00000115423|ENST00000389394|DNAH6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	531.8169555664062	2	531.837134	1061.65972	1.1803	0.00062773	1.0983	0.00058414	2.2787	0.0012119	531.8387026225992	88.939	0.1291	88.989	88.882	89.011	0.050415					4	2	2	0	0	0	0.20789	1	9149	9149		25.574	8.2091	1	20866	+		65100	18120	43266	43284	73890	73890					0.1313518564502374
VVKVYSAAALL	11	Unmodified	_VVKVYSAAALL_					0	0	0		ENST00000506637.2_1_4:81309036-81309321:-|nuORF	ENST00000506637.2_1_4:81309036-81309321:-|nuORF	ENST00000506637.2_1_4:81309036-81309321:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.329833984375	2	567.350074	1132.6856	0.796	0.00045161	0.011752	6.6672E-06	0.80775	0.00045828	567.3503463151261	92.705	0.66393	92.863	92.496	93.16	0.15874					23	15	3	0	0	0	0.17347	1	9391	9391		29.17	2.374	1	111040			65101	12942	43267	43285	73891	73891					0.12456035096647611
VVKYSPERQR	10	Unmodified	_VVKYSPERQR_					0	0	0		nc|ENSG00000152952|O00469-3|PLOD2;nc|ENSG00000152952|O00469|PLOD2;ENSG00000152952|ENST00000282903|PLOD2	nc|ENSG00000152952|O00469-3|PLOD2	nc|ENSG00000152952|O00469-3|PLOD2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	631.356201171875	2	631.354211	1260.69387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.744	1	70.776	70.276	71.276	0.031715								0	0	0	0.45132	1	6688	6688		30.318	2.4355	1				65102	14998	43268	43286	73892	73892					0.0739498206596636
VVLAGRLGP	9	Unmodified	_VVLAGRLGP_					0	0	0			REV__nc|ENSG00000203618|P13224-2|GP1BB	REV__nc|ENSG00000203618|P13224-2|GP1BB	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.28253173828125	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.641	1	40.723	40.223	41.223	0.081345								0	0	0	0.35327	1	2596	2596		13.775	0	1		+		65103	30152	43269	43287	73893	73893					0.10438385376653514
VVLALGPSGA	10	Unmodified	_VVLALGPSGA_					0	0	0			REV__ENSG00000103257|ENST00000261622|SLC7A5;REV__nc|ENSG00000258186|Q9GIP4-1|SLC7A5P2	REV__ENSG00000103257|ENST00000261622|SLC7A5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	442.2656555175781	2	442.26601	882.517468	-0.19204	-8.4931E-05	0.59771	0.00026435	0.40568	0.00017942	442.26615321014356	37.584	1.2785	37.897	36.921	38.2	0.31312					68	31	3	0	0	0	0.67608	1	3011	3011		45.952	1.8352	1	1603100	+		65104	17401;28134	43270	43288	73894	73894					0.07150972902843478
VVLASARNLKH	11	Unmodified	_VVLASARNLKH_					0	0	0		ENST00000489213.5_1_3:137906333-137942278:+|nuORF	ENST00000489213.5_1_3:137906333-137942278:+|nuORF	ENST00000489213.5_1_3:137906333-137942278:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3674926757812	2	604.367121	1206.71969	-1.2751	-0.00077064	0.9381	0.00056696	-0.33702	-0.00020368	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.75921	1	12674	12674		19.997	0	1	3346600			65105	12647	43271	43289	73895	73895					0.12459876308253115
VVLCIFRG	8	Unmodified	_VVLCIFRG_					0	0	0			REV__nc|ENSG00000066468|P21802-3|FGFR2	REV__nc|ENSG00000066468|P21802-3|FGFR2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	453.7664489746094	2	453.765123	905.515694	0.22799	0.00010345	1.49	0.00067612	1.718	0.00077957	453.76577882768925	41.923	1.745	41.996	41.584	43.329	0.073414					97	46	4	0	0	0	0.83466	1	2751	2751		23.037	1.3344	1	672610	+		65106	29701	43272	43290	73896	73896					0.059156406132501616
VVLCLVVP	8	Unmodified	_VVLCLVVP_					0	0	0			REV__ENST00000261819.7_1_12:121785646-121790261:-|nuORF	REV__ENST00000261819.7_1_12:121785646-121790261:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	421.2672424316406	2	421.264425	840.514297	1.0044	0.00042311	3.9075	0.0016461	4.9119	0.0020692	421.26591905130977	28.46	0.82453	28.287	27.979	28.803	-0.17336					37	20	3	0	0	0	0.84567	1	1759	1759		24.504	5.144	1	133000	+		65107	24405	43273	43291	73897	73897					0.08766006524479053
VVLCVVALN	9	Unmodified	_VVLCVVALN_					0	0	0		ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000148408|Q00975-2|CACNA1B	ENSG00000148408|ENST00000371372|CACNA1B;nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.2802734375	2	465.278063	928.541574	0.33843	0.00015746	3.9044	0.0018166	4.2428	0.0019741	465.2797412586998	88.673	1.4777	89.122	88.674	90.152	0.44893					74	35	3	0	0	0	0.77546	1	10439	10439		31.955	6.5047	1	982940			65108	14984;4960	43274	43292	73898	73898					0.07444490064870024
VVLDIHPF	8	Unmodified	_VVLDIHPF_					0	0	0			REV__ENSG00000135842|ENST00000367511|NIBAN1	REV__ENSG00000135842|ENST00000367511|NIBAN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.267333984375	2	470.268553	938.522553	-0.59682	-0.00028066	0.69957	0.00032898	0.10275	4.8321E-05	470.2687452652717	73.919	2.2099	74.478	73.965	76.174	0.55891					143	55	4	0	0	0	0.81548	1	8291	8291		20.482	0	1	1996400	+		65109	19258	43275	43293	73899	73899					0.05083276765469691
VVLDVISLVDK	11	Unmodified	_VVLDVISLVDK_					0	0	0		nc|ENSG00000138030|P50053-2|KHK;ENST00000490823.5_1_2:27309995-27310821:+|nuORF;ENSG00000138030|ENST00000260598|KHK	nc|ENSG00000138030|P50053-2|KHK	nc|ENSG00000138030|P50053-2|KHK	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	400.58050537109375	3	400.579706	1198.71729	2.7176	0.0010886	-0.65151	-0.00026098	2.0661	0.00082764	400.57928348734663	112.87	0.76526	112.84	112.7	113.46	-0.024811					36	18	3	0	0	0	0.73621	1	12503	12503		25.126	1.7481	1	3158500			65110	14950	43276	43294	73900	73900					0.1258798305993878
VVLEIPAA	8	Unmodified	_VVLEIPAA_					0	0	0		nc|ENSG00000105928|O60443-3|GSDME;ENSG00000105928|ENST00000645220|GSDME;ENST00000493723.5_1_7:24756537-24789393:-|nuORF	nc|ENSG00000105928|O60443-3|GSDME	nc|ENSG00000105928|O60443-3|GSDME	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.2479553222656	2	406.249829	810.485105	-0.18704	-7.5983E-05	-2.8424	-0.0011547	-3.0294	-0.0012307	406.2486919657563	88.521	4.267	88.589	86.287	90.554	0.068161					326	99	5	0	0	0	0.82464	1	9253	9253		21.702	1.2205	1	50007000			65111	2264	43277	43295	73901	73901					0.07228185499832307
VVLEIPAA	8	Unmodified	_VVLEIPAA_					0	0	0		nc|ENSG00000105928|O60443-3|GSDME;ENSG00000105928|ENST00000645220|GSDME;ENST00000493723.5_1_7:24756537-24789393:-|nuORF	nc|ENSG00000105928|O60443-3|GSDME	nc|ENSG00000105928|O60443-3|GSDME	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	406.24822998046875	2	406.249829	810.485105	-0.18598	-7.5555E-05	-2.5531	-0.0010372	-2.7391	-0.0011128	406.2487203598378	111.64	0.79961	111.58	111.26	112.06	-0.059937					46	25	2	0	0	0	0.85787	1	12148	12148		9.4706	0	1	69533			65112	2264	43277	43295	73902	73902					0.07228185499832307
VVLFLFFL	8	Unmodified	_VVLFLFFL_					0	0	0			REV__nc|ENSG00000284609|Q8NGG8|OR8B3	REV__nc|ENSG00000284609|Q8NGG8|OR8B3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	499.3102111816406	2	499.30969	996.604826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.811	1	15.859	15.359	16.359	0.047803								0	0	0	0.3048	1	86	86		43.626	13.122	1		+		65113	30277	43278	43296	73903	73903					0.10638798844422581
VVLFLPVLLWN	11	Unmodified	_VVLFLPVLLWN_					0	0	0			REV__ENST00000260585.11_1_2:26569100-26611935:+|nuORF	REV__ENST00000260585.11_1_2:26569100-26611935:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.273193359375	3	438.272437	1311.79548	-0.15875	-6.9576E-05	1.3232	0.00057993	1.1645	0.00051035	438.27291084215926	107.41	0.8759	107.38	106.95	107.82	-0.034409					90	20	5	0	0	0	0.73621	1	11727	11727		25.126	2.5644	1	4015900	+		65114	19429	43279	43297	73904	73904					0.15205460435845453
VVLGQFLVLK	10	Unmodified	_VVLGQFLVLK_					0	0	0		ENST00000420029.1_1_1:174726080-174726215:-|nuORF;ENST00000524628.1_1_11:65770029-65771240:+|nuORF;ENSG00000175334|ENST00000312175|BANF1	ENST00000420029.1_1_1:174726080-174726215:-|nuORF	ENST00000420029.1_1_1:174726080-174726215:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	558.36181640625	2	558.362985	1114.71142	0.20629	0.00011519	-0.041348	-2.3087E-05	0.16494	9.2099E-05	558.362781816973	79.767	0.84906	80.183	79.699	80.548	0.41621					48	19	4	0	0	0	0.16515	3	9136	9136;9148;9160		93.195	48.818	1	953200			65115	7009	43280	43298	73905;73906;73907	73905					0.1586492933890895
VVLGQFLVLK	10	Unmodified	_VVLGQFLVLK_					0	0	0		ENST00000420029.1_1_1:174726080-174726215:-|nuORF;ENST00000524628.1_1_11:65770029-65771240:+|nuORF;ENSG00000175334|ENST00000312175|BANF1	ENST00000420029.1_1_1:174726080-174726215:-|nuORF	ENST00000420029.1_1_1:174726080-174726215:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	558.361083984375	2	558.362985	1114.71142	-0.082789	-4.6226E-05	0.053217	2.9714E-05	-0.029572	-1.6512E-05	558.3628901674431	79.68	0.63592	80.23	79.914	80.55	0.54945					43	14	4	0	0	0	0.0418	4	9173	9151;9161;9173;9186		110.12	64.148	1	1074300			65116	7009	43280	43298	73908;73909;73910;73911	73910					0.1586492933890895
VVLGVTQFKRA	11	Unmodified	_VVLGVTQFKRA_					0	0	0		nc|ENSG00000174485|Q7Z401|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A;ENSG00000174485|ENST00000443035|DENND4A;ENST00000562028.1_1_15:65988668-65993524:-|nuORF	nc|ENSG00000174485|Q7Z401|DENND4A	nc|ENSG00000174485|Q7Z401|DENND4A	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.5821228027344	3	406.583674	1216.72919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.38	1	113.4	112.9	113.9	0.020027								0	0	0	0.56276	1	13695	13695		20.03	2.8637	1				65117	6939	43281	43299	73912	73912					0.12949644593800258
VVLHGIVL	8	Unmodified	_VVLHGIVL_					0	0	0			REV__ENSG00000182858|ENST00000330817|ALG12	REV__ENSG00000182858|ENST00000330817|ALG12	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	425.2763366699219	2	425.281463	848.548374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.17	1	62.277	61.777	62.777	0.10743								0	0	0	0.29725	1	5416	5416		24.504	0	1		+		65118	22555	43282	43300	73913	73913					0.11804171007736386
VVLIKPSR	8	Unmodified	_VVLIKPSR_					0	0	0		nc|ENSG00000022567|Q5BKX6-2|SLC45A4;nc|ENSG00000022567|Q5BKX6|SLC45A4;nc|ENSG00000022567|Q5BKX6-3|SLC45A4;ENSG00000022567|ENST00000517878|SLC45A4	nc|ENSG00000022567|Q5BKX6-2|SLC45A4	nc|ENSG00000022567|Q5BKX6-2|SLC45A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	456.80841064453125	2	456.30547	910.596387	0.80667	0.00036809	-3.3976	-0.0015503	-2.5909	-0.0011822	456.30387685904844	21.656	0.83154	21.721	21.472	22.303	0.064745					40	29	2	0	0	0	0.81548	1	619	619		20.482	1.1219	1	22104			65119	852	43283	43301	73914	73914					0.1375124492778923
VVLILSFCAK	10	Carbamidomethyl (C)	_VVLILSFC(Carbamidomethyl (C))AK_	VVLILSFC(1)AK		VVLILSFC(51)AK		0	1	0			REV__ENSG00000255298|ENST00000641992|OR8G5	REV__ENSG00000255298|ENST00000641992|OR8G5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.3404541015625	2	575.338652	1148.66275	-0.95443	-0.00054912	4.3393	0.0024966	3.3849	0.0019474	575.3409602555264	38.845	0.98347	38.797	38.42	39.404	-0.047005					49	22	3	0	0	0	0.5766	1	2777	2777		51.335	6.9583	1	284350	+		65120	23896	43284	43302	73915	73915	290				0.09436692707504335
VVLIRMAA	8	Unmodified	_VVLIRMAA_					0	0	0			REV__nc|ENSG00000163625|Q8IZQ1-2|WDFY3	REV__nc|ENSG00000163625|Q8IZQ1-2|WDFY3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	436.7725524902344	2	436.772948	871.531344	0.39754	0.00017364	0.64314	0.00028091	1.0407	0.00045454	436.7734656635363	27.358	1.8492	27.398	26.176	28.026	0.040833					83	57	2	0	0	0	0.81724	1	1183	1183		14.664	0.88877	1	81327	+		65121	20946	43285	43303	73916	73916					0.09043927130278462
VVLKTLRLVER	11	Unmodified	_VVLKTLRLVER_					0	0	0			REV__ENSG00000174231|ENST00000304992|PRPF8	REV__ENSG00000174231|ENST00000304992|PRPF8	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.62908935546875	3	442.625761	1324.85546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.95	1	117.98	117.48	118.48	0.026466								0	0	0	0.56276	1	12971	12971		24.232	12.299	1		+		65122	21981	43286	43304	73917	73917					0.20602151099069488
VVLLALPIEL	10	Unmodified	_VVLLALPIEL_					0	0	0			REV__nc|ENSG00000010165|Q8N6R0-1|METTL13	REV__nc|ENSG00000010165|Q8N6R0-1|METTL13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	540.3587036132812	2	540.357368	1078.70018	0.26404	0.00014267	2.2426	0.0012118	2.5067	0.0013545	540.3583702946399	36.686	1.1714	36.789	36.281	37.453	0.10306					78	34	3	0	0	0	0.85694	1	2022	2022		21.96	4.5949	1	384450	+		65123	16157	43287	43305	73918	73918					0.16398107244799576
VVLLALPIEL	10	Unmodified	_VVLLALPIEL_					0	0	0			REV__nc|ENSG00000010165|Q8N6R0-1|METTL13	REV__nc|ENSG00000010165|Q8N6R0-1|METTL13	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	540.3582763671875	2	540.357368	1078.70018	0.33888	0.00018312	2.2349	0.0012076	2.5738	0.0013908	540.3583651603944	36.668	1.2319	36.608	36.237	37.469	-0.060333					76	35	3	0	0	0	0.88541	1	2051	2051		11.511	0.64546	1	376760	+		65124	16157	43287	43305	73919	73919					0.16398107244799576
VVLLKKCN	8	Unmodified	_VVLLKKCN_					0	0	0		ENST00000487064.1_1_19:33832314-33832719:+|nuORF	ENST00000487064.1_1_19:33832314-33832719:+|nuORF	ENST00000487064.1_1_19:33832314-33832719:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.7879333496094	2	458.786056	915.557558	0.6747	0.00030954	3.1519	0.0014461	3.8266	0.0017556	458.78743118260775	92.703	1.6363	93.149	92.689	94.326	0.44662					124	39	4	0	0	0	0.87276	1	11117	11117		29.842	1.5873	1	5092100			65125	12594	43288	43306	73920	73920					0.09640196301756987
VVLLRKKH	8	Unmodified	_VVLLRKKH_					0	0	0			REV__ENSG00000070061|ENST00000374647|ELP1	REV__ENSG00000070061|ENST00000374647|ELP1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	496.83795166015625	2	496.840011	991.665469	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.665	1	74.71	74.21	75.21	0.04509								0	0	0	0.30316	1	7234	7234		42.474	18.272	1		+		65126	16595	43289	43307	73921	73921					0.16930328947353246
VVLLSMLREG	10	Unmodified	_VVLLSMLREG_					0	0	0		ENSG00000165623|ENST00000378681|UCMA	ENSG00000165623|ENST00000378681|UCMA	ENSG00000165623|ENST00000378681|UCMA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	558.8284301757812	2	558.825909	1115.63727	0.050659	2.8309E-05	2.902	0.0016217	2.9527	0.00165	558.827346664337	65.575	0.73492	65.54	65.252	65.986	-0.034798					94	39	3	0	0	0	0.86272	1	6282	6282		24.519	0	1	4755700			65127	6101	43290	43308	73922	73922					0.08407218185107013
VVLLSYTLKTT	11	Unmodified	_VVLLSYTLKTT_					0	0	0		chr1:244654025-244686597|52|10.42|0.43|4.58|+|ENST00000418162|DESI2,DESI2	chr1:244654025-244686597|52|10.42|0.43|4.58|+|ENST00000418162|DESI2,DESI2	chr1:244654025-244686597|52|10.42|0.43|4.58|+|ENST00000418162|DESI2,DESI2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.3712158203125	2	619.373746	1236.73294	-1.2262	-0.00075948	-1.955	-0.0012109	-3.1812	-0.0019704	619.3724290211392	101.55	1.3094	101.7	101.32	102.63	0.15505					84	32	4	0	0	0	0.72918	1	10597	10597		26.693	1.1189	1	1786600			65128	45	43291	43309	73923	73923					0.12404269576950355
VVLLVAFLI	9	Unmodified	_VVLLVAFLI_					0	0	0			REV__ENST00000469135.1_1_1:180945708-180957553:-|nuORF	REV__ENST00000469135.1_1_1:180945708-180957553:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	494.7679443359375	2	493.836071	985.65759	-1.0472	-0.00051714	-3.3995	-0.0016788	-4.4467	-0.0021959	493.83427359144315	38.729	0.37543	39.07	38.856	39.232	0.34187					15	8	2	0	0	0	0.20789	1	3224	3224		8.8223	0	1	93703	+		65129	19252	43292	43310	73924	73924					0.1641875690722827
VVLLVPSD	8	Unmodified	_VVLLVPSD_					0	0	0		ENST00000462326.5_1_7:55503854-55639964:-|nuORF;ENST00000453256.5_1_7:55540449-55583655:-|nuORF;ENST00000428648.5_1_7:55540449-55639414:-|nuORF;ENST00000418904.5_1_7:55540449-55620397:-|nuORF	ENST00000462326.5_1_7:55503854-55639964:-|nuORF	ENST00000462326.5_1_7:55503854-55639964:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	421.2546081542969	2	421.255111	840.49567	-1.7494	-0.00073696	-1.0287	-0.00043336	-2.7782	-0.0011703	421.25452750849325	84.126	1.3912	84.264	83.786	85.177	0.13811					78	31	3	0	0	0	0.82464	1	8161	8161		21.702	0	1	553140			65130	11432	43293	43311	73925	73925					0.06904168154278523
VVLNHVRKS	9	Unmodified	_VVLNHVRKS_					0	0	0		ENSG00000163320|ENST00000482016|CGGBP1;chr3:88058223-88140970|54|18.63|0.56|5.07|-|ENST00000462901|CGGBP1,CGGBP1	ENSG00000163320|ENST00000482016|CGGBP1	ENSG00000163320|ENST00000482016|CGGBP1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	525.7598266601562	2	526.322183	1050.62981	0.52357	0.00027557	4.317	0.0022721	4.8406	0.0025477	526.3243374031125	58.87	2.4429	58.839	57.806	60.249	-0.030884					126	67	2	0	0	0	0.20789	1	5360	5360		20.947	0	1	105880			65131	410	43294	43312	73926	73926					0.10652246699692114
VVLPETAVL	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VVLPETAVL_					1	0	0		ENST00000586277.5_1_17:41154909-41154951:+|nuORF	ENST00000586277.5_1_17:41154909-41154951:+|nuORF	ENST00000586277.5_1_17:41154909-41154951:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7951965332031	2	491.794601	981.574648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.164	1	62.154	61.654	62.654	-0.0094147								0	0	0	0.29103	1	5768	5768		40.573	10.069	1				65132	14161	43295	43313	73927	73927					0.08312395388566074
VVLPETAVL	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VVLPETAVL_					1	0	0		ENST00000586277.5_1_17:41154909-41154951:+|nuORF	ENST00000586277.5_1_17:41154909-41154951:+|nuORF	ENST00000586277.5_1_17:41154909-41154951:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7953796386719	2	491.794601	981.574648	-0.58221	-0.00028633	2.944	0.0014479	2.3618	0.0011615	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.69914	1	4946	4946		40.573	15.122	1	792830			65133	14161	43295	43313	73928	73928					0.08312395388566074
VVLPRNRTVLE	11	Unmodified	_VVLPRNRTVLE_					0	0	0			REV__ENSG00000183090|ENST00000329798|FREM3	REV__ENSG00000183090|ENST00000329798|FREM3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.3975830078125	2	648.393336	1294.77212	2.6466	0.001716	-3.9241	-0.0025444	-1.2775	-0.00082835	648.3907938833173	114.19	1.0061	114.17	113.59	114.59	-0.024452					48	34	2	0	0	0	0.76322	1	12620	12620		19.104	3.4617	1	216020	+		65134	22574	43296	43314	73929	73929					0.13652414651232903
VVLPRRQVSGP	11	Unmodified	_VVLPRRQVSGP_					0	0	0		ENST00000279281.7_2_11:64879073-64879157:+|nuORF	ENST00000279281.7_2_11:64879073-64879157:+|nuORF	ENST00000279281.7_2_11:64879073-64879157:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	403.2467346191406	3	403.247173	1206.71969	0.73411	0.00029603	-1.4803	-0.00059692	-0.74617	-0.00030089	403.24652072953415	104.46	3.314	104.58	103.62	106.94	0.11685					265	81	5	0	0	0	0.75495	1	11075	11075		13.508	0	1	18617000			65135	9616	43297	43315	73930	73930					0.12459876308253115
VVLPRSLAPA	10	Unmodified	_VVLPRSLAPA_					0	0	0		nc|ENSG00000133943|Q7Z3D6-5|DGLUCY;nc|ENSG00000133943|Q7Z3D6-4|DGLUCY;nc|ENSG00000133943|Q7Z3D6-3|DGLUCY;nc|ENSG00000133943|Q7Z3D6|DGLUCY;ENSG00000133943|ENST00000256324|DGLUCY;ENST00000518649.5_1_14:91626614-91647575:+|nuORF;nc|ENSG00000133943|Q7Z3D6-6|DGLUCY	nc|ENSG00000133943|Q7Z3D6-5|DGLUCY;nc|ENSG00000133943|Q7Z3D6-6|DGLUCY	nc|ENSG00000133943|Q7Z3D6-5|DGLUCY	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	511.820556640625	2	511.821484	1021.62842	0.41163	0.00021068	-1.6694	-0.00085442	-1.2577	-0.00064374	511.82049110618453	79.343	0.76666	79.892	79.615	80.382	0.54945					45	17	3	0	0	0	0.67608	1	9120	9120		45.952	1.8352	1	1191300			65136	3900;14931	43298	43316	73931	73931					0.11846612610929697
VVLPVAYL	8	Unmodified	_VVLPVAYL_					0	0	0		ENST00000420498.1_1_1:161123670-161129115:-|nuORF	ENST00000420498.1_1_1:161123670-161129115:-|nuORF	ENST00000420498.1_1_1:161123670-161129115:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	437.2718505859375	2	437.275847	872.537141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.626	1	55.626	55.126	56.126	0								0	0	0	0.29725	1	4731	4731		24.504	0	1				65137	11452	43299	43317	73932	73932					0.09577348913592232
VVLQIIDF	8	Unmodified	_VVLQIIDF_					0	0	0			REV__nc|ENSG00000089041|Q99572-7|P2RX7	REV__nc|ENSG00000089041|Q99572-7|P2RX7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.78411865234375	2	473.784036	945.553519	-0.42615	-0.0002019	-1.9902	-0.0009429	-2.4163	-0.0011448	473.7828976830325	21.758	0.79819	21.7	21.484	22.282	-0.057203					55	31	3	0	0	0	0.89962	1	616	616		38.806	3.6054	1	107510	+		65138	16956	43300	43318	73933	73933					0.07856430079721122
VVLRIPLGIKV	11	Unmodified	_VVLRIPLGIKV_					0	0	0			REV__nc|ENSG00000144115|Q86YJ6-4|THNSL2	REV__nc|ENSG00000144115|Q86YJ6-4|THNSL2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	603.4191284179688	2	603.918458	1205.82236	3.2117	0.0019396	3.7892	0.0022884	7.0009	0.004228	603.9185370100053	108.88	0.57749	108.85	108.61	109.19	-0.029381					31	23	2	0	0	0	0.17925	1	12063	12063		14.137	8.5793	1	1325900	+		65139	29904	43301	43319	73934	73934					0.2276856904700253
VVLRLKPHK	9	Unmodified	_VVLRLKPHK_					0	0	0		ENSG00000171303|ENST00000302909|KCNK3	ENSG00000171303|ENST00000302909|KCNK3	ENSG00000171303|ENST00000302909|KCNK3	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.3682861328125	2	545.366393	1088.71823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.774	1	17.774	17.274	18.274	0								0	0	0	0.34024	1	241	241		17.365	5.8539	1				65140	6656	43302	43320	73935	73935					0.1774228701017364
VVLRLRPRVR	10	Unmodified	_VVLRLRPRVR_					0	0	0		ENSG00000225556|ENST00000694868|C2CD4D	ENSG00000225556|ENST00000694868|C2CD4D	ENSG00000225556|ENST00000694868|C2CD4D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	632.4267578125	2	632.427848	1262.84114	-0.021077	-1.333E-05	3.3233	0.0021018	3.3023	0.0020884	632.4296452184271	108.26	0.70177	108.26	107.96	108.66	0					68	33	3	0	0	0	0.91594	1	11289	11289		6.7355	0.42289	1	3975500			65141	8707	43303	43321	73936	73936					0.22023543461432382
VVLRLRPRVR	10	Unmodified	_VVLRLRPRVR_					0	0	0		ENSG00000225556|ENST00000694868|C2CD4D	ENSG00000225556|ENST00000694868|C2CD4D	ENSG00000225556|ENST00000694868|C2CD4D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	632.429931640625	2	632.427848	1262.84114	1.2265	0.00077567	2.1272	0.0013453	3.3537	0.002121	632.4287764251125	108.29	0.57515	108.33	108.03	108.61	0.034355					58	25	3	0	0	0	0.85438	1	11899	11899		16.473	4.9621	1	3438700			65142	8707	43303	43321	73937	73937					0.22023543461432382
VVLRLRPRVR	10	Unmodified	_VVLRLRPRVR_					0	0	0		ENSG00000225556|ENST00000694868|C2CD4D	ENSG00000225556|ENST00000694868|C2CD4D	ENSG00000225556|ENST00000694868|C2CD4D	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	632.4276123046875	2	632.427848	1262.84114	0.93195	0.00058939	2.6701	0.0016887	3.6021	0.0022781	632.4290217168235	109.62	0.44661	109.7	109.43	109.87	0.078552					51	22	3	0	0	0	0.85438	1	11787	11787		16.473	6.2079	1	4841600			65143	8707	43303	43321	73938	73938					0.22023543461432382
VVLRLRPRVR	10	Unmodified	_VVLRLRPRVR_					0	0	0		ENSG00000225556|ENST00000694868|C2CD4D	ENSG00000225556|ENST00000694868|C2CD4D	ENSG00000225556|ENST00000694868|C2CD4D	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	632.427848	1262.84114	-0.16073	-0.00010165	4.1546	0.0026275	3.9939	0.0025258	632.4302227700383	109.71	0.19833	109.66	109.52	109.72	-0.049324	-0.027921	-0.00062346	NaN	16.473	19	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2113300			65144	8707	43303	43321							0.22023543461432382
VVLRLRPRVR	10	Unmodified	_VVLRLRPRVR_					0	0	0		ENSG00000225556|ENST00000694868|C2CD4D	ENSG00000225556|ENST00000694868|C2CD4D	ENSG00000225556|ENST00000694868|C2CD4D	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	632.427848	1262.84114	-1.1838	-0.00074866	4.9666	0.003141	3.7828	0.0023923	632.4306397496853	109.7	1.1682	109.71	109.38	110.55	0.0060425	0.016862	0.00040357	NaN	16.473	109	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1887400			65145	8707	43303	43321							0.22023543461432382
VVLRQKFMV	9	Unmodified	_VVLRQKFMV_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.340087890625	2	560.338987	1118.66342	3.1376	0.0017581	-1.1146	-0.00062457	2.023	0.0011336	560.3382958567432	102.33	3.4768	102.28	101.7	105.18	-0.046997					361	83	6	0	0	0	0.76996	2	11127	11127;11520		33.516	3.0119	1	83033000			65146	14703	43304	43322	73939;73940	73939					0.10883532147249753
VVLRQKFMV	9	Unmodified	_VVLRQKFMV_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.33984375	2	560.338987	1118.66342	3.1432	0.0017612	-0.54994	-0.00030816	2.5932	0.0014531	560.3385698179089	105.88	1.8636	105.84	105.1	106.97	-0.03714					103	43	3	0	0	0	0.7932	1	11590	11590		25.45	3.4903	1	1086900			65147	14703	43304	43322	73941	73941					0.10883532147249753
VVLRQKFMV	9	Unmodified	_VVLRQKFMV_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3399658203125	2	560.338987	1118.66342	3.1463	0.001763	-0.76963	-0.00043125	2.3766	0.0013317	560.3384571607505	112.87	1.2169	112.84	112.7	113.91	-0.024811					58	33	2	0	0	0	0.7932	1	12572	12572		19.36	0	1	1119600			65148	14703	43304	43322	73942	73942					0.10883532147249753
VVLRQKFMV	9	Unmodified	_VVLRQKFMV_					0	0	0		L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	L1PBa_dup1275|chrX:64929193-64934093:-|1.2531690912019988|0.2585712552877928|2.28|63.0|87|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3403930664062	2	560.338987	1118.66342	-1.4185	-0.00079484	3.8922	0.0021809	2.4736	0.0013861	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	1	12733	12733		25.45	0.93098	1	4071000			65149	14703	43304	43322	73943	73943					0.10883532147249753
VVLSYVLFF	9	Unmodified	_VVLSYVLFF_					0	0	0			REV__ENSG00000163870|ENST00000355552|TPRA1	REV__ENSG00000163870|ENST00000355552|TPRA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.7953491210938	2	543.815336	1085.61612	-0.25997	-0.00014137	-0.066276	-3.6042E-05	-0.32624	-0.00017742	543.8153901966523	66.254	0.341	66.64	66.547	66.888	0.38581					13	8	2	0	0	0	0.20789	1	7233	7233		25.45	2.4077	1	107340	+		65150	20986	43305	43323	73944	73944					0.07673576147908534
VVLTLPGVP	9	Unmodified	_VVLTLPGVP_					0	0	0		ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	ENST00000156825.5_1_19:1577339-1577516:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	447.7878112792969	2	447.786579	893.558604	-1.4062	-0.00062966	4.3321	0.0019399	2.926	0.0013102	447.7883827410388	38.825	1.0154	39.167	38.856	39.872	0.34187					59	23	4	0	0	0	0.7932	1	3232	3232		18.324	0	1	988770			65151	9078	43306	43324	73945	73945					0.1075673394233263
VVLVSQVRQAM	11	Unmodified	_VVLVSQVRQAM_					0	0	0		ENST00000367602.7_1_1:180166598-180166805:+|nuORF	ENST00000367602.7_1_1:180166598-180166805:+|nuORF	ENST00000367602.7_1_1:180166598-180166805:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	615.357421875	2	615.355365	1228.69618	-0.35839	-0.00022054	3.6819	0.0022657	3.3235	0.0020451	615.3576084899992	104.75	2.3818	104.73	104.28	106.66	-0.014809					147	56	4	0	0	0	0.72106	1	11358	11358		28.081	1.0342	1	1933000			65152	10561	43307	43325	73946	73946					0.09097694479441998
VVMAAGYKKIK	11	Unmodified	_VVMAAGYKKIK_					0	0	0			REV__nc|ENSG00000116984|Q99707-2|MTR	REV__nc|ENSG00000116984|Q99707-2|MTR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.3668212890625	2	604.365201	1206.71585	-0.4862	-0.00029384	2.3109	0.0013966	1.8247	0.0011028	604.3662900636255	107.88	0.40465	107.84	107.52	107.93	-0.042404					22	9	3	0	0	0	0.72228	1	11729	11729		27.882	3.3631	1	10863000	+		65153	18237	43308	43326	73947	73947					0.12076070490184065
VVMAAGYKKIK	11	Unmodified	_VVMAAGYKKIK_					0	0	0			REV__nc|ENSG00000116984|Q99707-2|MTR	REV__nc|ENSG00000116984|Q99707-2|MTR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	403.24688720703125	3	403.245893	1206.71585	3.1806	0.0012826	-0.63485	-0.000256	2.5458	0.0010266	403.2455898338112	104.57	4.2773	104.61	103.55	107.83	0.039864					310	101	5	0	0	0	0.75495	1	11505	11505		18.531	0	1	15278000	+		65154	18237	43308	43326	73948	73948					0.12076070490184065
VVMAAGYKKIK	11	Unmodified	_VVMAAGYKKIK_					0	0	0			REV__nc|ENSG00000116984|Q99707-2|MTR	REV__nc|ENSG00000116984|Q99707-2|MTR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	604.3642578125	2	604.365201	1206.71585	-1.2751	-0.00077064	4.1148	0.0024869	2.8397	0.0017162	604.3674978879853	113.32	6.8434	113.27	113.09	119.94	-0.044777					371	162	4	0	0	0	0.77538	1	12904	12904		16.473	0.83134	1	3346600	+		65155	18237	43308	43326	73949	73949					0.12076070490184065
VVMFIVSAAS	10	Unmodified	_VVMFIVSAAS_					0	0	0			REV__nc|ENSG00000220721|Q8NHA8|OR1F12P	REV__nc|ENSG00000220721|Q8NHA8|OR1F12P	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2816772460938	2	512.280803	1022.54705	-0.3427	-0.00017556	1.3496	0.0006914	1.0069	0.00051584	512.2814243636773	86.125	3.8841	86.31	84.842	88.726	0.18523					170	91	2	0	0	0	0.85934	1	8491	8491		35.618	1.4457	1	381930	+		65156	30205	43309	43327	73950	73950					0.036681688566886805
VVMLSAHW	8	Unmodified	_VVMLSAHW_					0	0	0		ENST00000513680.5_1_6:15524894-15660633:-|nuORF;ENST00000506844.1_1_6:15524658-15660633:-|nuORF;nc|ENSG00000047579|Q96EV8-2|DTNBP1;ENST00000510395.5_1_6:15523208-15651611:-|nuORF;ENSG00000047579|ENST00000344537|DTNBP1	ENST00000513680.5_1_6:15524894-15660633:-|nuORF	ENST00000513680.5_1_6:15524894-15660633:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.2414855957031	2	471.746931	941.479308	-0.18439	-8.6987E-05	-2.6988	-0.0012732	-2.8832	-0.0013601	471.74528123132546	86.606	1.2034	86.662	86.397	87.601	0.055641					36	27	2	0	0	0	0.4196	1	8859	8859		9.4706	0	1	86357			65157	962	43310	43328	73951	73951					0.006227637165352462
VVMRDPASK	9	Unmodified	_VVMRDPASK_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.7734069824219	2	501.773677	1001.5328	-0.052677	-2.6432E-05	0.06946	3.4853E-05	0.016783	8.4213E-06	501.77355964208687	25.284	1.1814	24.955	24.43	25.611	-0.32825					56	26	3	0	0	0	0.14236	2	1283	1283;1295		85.161	19.594	1	629600			65158	3232	43311	43329	73952;73953	73952					0.0320951642838736
VVMRDPASK	9	Unmodified	_VVMRDPASK_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.7728576660156	2	501.773677	1001.5328	2.7001	0.0013548	-2.5994	-0.0013043	0.10069	5.0522E-05	501.77218039034597	25.294	1.0363	24.863	24.318	25.354	-0.4311					56	23	3	0	0	0	0.19437	1	1280	1280		75.043	0.78827	1	685650			65159	3232	43311	43329	73954	73954					0.0320951642838736
VVMRDPASK	9	Unmodified	_VVMRDPASK_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	501.773677	1001.5328	-1.8522	-0.00092941	4.0602	0.0020373	2.208	0.0011079	501.77828256072235	24.652	0.08399	24.652	24.589	24.673	0	-0.17117	0.0026839	NaN	85.161	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10211			65160	3232	43311	43329							0.0320951642838736
VVNAGHSQ	8	Unmodified	_VVNAGHSQ_					0	0	0		ENST00000369161.3_1:149813728-149813854:-|nuORF	ENST00000369161.3_1:149813728-149813854:-|nuORF	ENST00000369161.3_1:149813728-149813854:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2487487792969	2	406.206484	810.398415	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.158	1	16.075	15.575	16.575	-0.083363								0	0	0	0.29755	1	113	113		24.203	0	1				65161	10613	43312	43330	73955	73955					-0.014368010020007205
VVNGNHDLYLL	11	Unmodified	_VVNGNHDLYLL_					0	0	0			REV__ENST00000551553.1_1_12:57846273-57850628:+|nuORF	REV__ENST00000551553.1_1_12:57846273-57850628:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.56024169921875	3	419.559305	1255.65609	2.0741	0.0008702	0.84691	0.00035533	2.921	0.0012255	419.55960083493994	32.822	0.72305	32.82	32.493	33.216	-0.0016365					45	16	4	0	0	0	0.62914	1	1887	1887		41.08	3.4802	1	143060	+		65162	19529	43313	43331	73956	73956					0.03848471080550553
VVNHFTPE	8	Unmodified	_VVNHFTPE_					0	0	0		ENSG00000134827|ENST00000257264|TCN1	ENSG00000134827|ENST00000257264|TCN1	ENSG00000134827|ENST00000257264|TCN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.754638671875	2	471.737617	941.460681	-0.83356	-0.00039322	0.86401	0.00040759	0.030457	1.4368E-05	471.7378862067915	47.021	0.47793	47.492	47.257	47.735	0.47139					18	10	3	0	0	0	0.4196	1	4488	4488		35.201	22.242	1	602060			65163	3962	43314	43332	73957	73957					-0.012390746536652841
VVNHFTPE	8	Unmodified	_VVNHFTPE_					0	0	0		ENSG00000134827|ENST00000257264|TCN1	ENSG00000134827|ENST00000257264|TCN1	ENSG00000134827|ENST00000257264|TCN1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	471.737617	941.460681	-1.6657	-0.00078578	1.4973	0.00070634	-0.16839	-7.9438E-05	471.7383110219369	46.787	0.39483	47.71	47.563	47.958	0.92315	0.10899	0.00022486	NaN	24.203	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	677720			65164	3962	43314	43332							-0.012390746536652841
VVNKVPLTGK	10	Unmodified	_VVNKVPLTGK_					0	0	0		ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.8345947265625	2	527.834591	1053.65463	-0.411	-0.00021694	0.35302	0.00018634	-0.057977	-3.0602E-05	527.8346773559	29.911	1.0516	29.939	29.531	30.582	0.028618					65	23	4	0	0	0	0.12134	3	1905	1905;1916;1928		98.582	30.483	1	834740			65165	5096	43315	43333	73958;73959;73960	73958					0.12994881782424272
VVNKVPLTGK	10	Unmodified	_VVNKVPLTGK_					0	0	0		ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	ENSG00000151135|ENST00000280756|TMEM263	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.8344116210938	2	527.834591	1053.65463	0.46908	0.0002476	-0.58613	-0.00030938	-0.11705	-6.1783E-05	527.8341669349551	30.059	0.91078	29.97	29.619	30.53	-0.089544					52	20	3	0	0	0	0.18075	2	1959	1948;1959		90.601	30.483	1	978200			65166	5096	43315	43333	73961;73962	73962					0.12994881782424272
VVNVYRLIT	9	Unmodified	_VVNVYRLIT_					0	0	0		ENSG00000095564|ENST00000265990|BTAF1;nc|ENSG00000095564|O14981-2|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.8270263671875	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.7	1	115.67	115.17	116.17	-0.02433								0	0	0	0.2969	1	12808	12808		31.955	1.4512	1				65167	1730	43316	43334	73963	73963					0.1041859526535518
VVPALTPE	8	Unmodified	_VVPALTPE_					0	0	0		ENSG00000179954|ENST00000389623|SSC5D	ENSG00000179954|ENST00000389623|SSC5D	ENSG00000179954|ENST00000389623|SSC5D	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	413.2369079589844	2	413.239461	824.46437	-1.3714	-0.00056672	-1.4151	-0.00058475	-2.7865	-0.0011515	413.2388028419787	75.095	1.9798	75.095	74.071	76.051	0					127	77	2	0	0	0	0.87276	1	6804	6804		29.842	0	1	222450			65168	7310	43317	43335	73964	73964					0.045115951201864846
VVPDTRTF	8	Unmodified	_VVPDTRTF_					0	0	0			REV__ENSG00000132170|ENST00000651735|PPARG	REV__ENSG00000132170|ENST00000651735|PPARG	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	467.7539367675781	2	467.753267	933.491981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.707	1	56.74	56.24	57.24	0.033184								0	0	0	0.29245	1	5128	5128		30.504	2.6214	1		+		65169	18986	43318	43336	73965	73965					0.02257498380436118
VVPGSSTDI	9	Unmodified	_VVPGSSTDI_					0	0	0		nc|ENSG00000160058|Q9NW68-6|BSDC1	nc|ENSG00000160058|Q9NW68-6|BSDC1	nc|ENSG00000160058|Q9NW68-6|BSDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.7289733886719	2	437.729458	873.444362	0.48198	0.00021098	0.13299	5.8214E-05	0.61497	0.00026919	437.7294765331459	26.126	0.69964	26.172	25.815	26.515	0.045509					43	19	4	0	0	0	0.74721	1	1064	1064		37.159	3.6435	1	121760			65170	15035	43319	43337	73966	73966					0.0025779938957839477
VVPGSSTDIS	10	Unmodified	_VVPGSSTDIS_					0	0	0		nc|ENSG00000160058|Q9NW68-6|BSDC1	nc|ENSG00000160058|Q9NW68-6|BSDC1	nc|ENSG00000160058|Q9NW68-6|BSDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2451171875	2	481.245472	960.476391	-0.99487	-0.00047878	0.93546	0.00045018	-0.059413	-2.8592E-05	481.24577626446245	28.501	1.0301	28.479	28.021	29.051	-0.02207					50	27	3	0	0	0	0.85934	1	1363	1363		35.618	0.41757	1	305280			65171	15035	43320	43338	73967	73967					-0.005428329272717747
VVPGWHQG	8	Unmodified	_VVPGWHQG_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	440.22454833984375	2	440.22722	878.439886	-1.5747	-0.00069322	-2.4683	-0.0010866	-4.0429	-0.0017798	440.2260020100996	16.785	0.1838	16.831	16.726	16.909	0.0457					12	8	2	0	0	0	0.82464	1	186	186		21.702	0.7554	1	69788	+		65172	19018	43321	43339	73968	73968					-0.004196202426669515
VVPGWHQG	8	Unmodified	_VVPGWHQG_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	440.22722	878.439886	0.94175	0.00041459	-4.9371	-0.0021734	-3.9953	-0.0017588	440.2248772505458	16.656	0.29826	16.734	16.585	16.883	0.07715	-0.065439	-0.00019803	NaN	21.702	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57015	+		65173	19018	43321	43339							-0.004196202426669515
VVPGWHQG	8	Unmodified	_VVPGWHQG_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	440.22722	878.439886	-1.5747	-0.00069322	-2.4683	-0.0010866	-4.0429	-0.0017798	440.2260020100996	16.785	0.1838	16.831	16.726	16.909	0.0457	0.031632	0.0019756	NaN	21.702	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69788	+		65174	19018	43321	43339							-0.004196202426669515
VVPGWHQG	8	Unmodified	_VVPGWHQG_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	440.22722	878.439886	0.019573	8.6168E-06	-4.3028	-0.0018942	-4.2833	-0.0018856	440.22503062407947	16.786	0.18648	16.845	16.731	16.917	0.059269	0.046152	0.00036037	NaN	21.702	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54634	+		65175	19018	43321	43339							-0.004196202426669515
VVPGWHQG	8	Unmodified	_VVPGWHQG_					0	0	0			REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	REV__nc|ENSG00000132635|Q9H1Q7-3|PCED1A	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	440.22722	878.439886	0.48149	0.00021197	-4.3087	-0.0018968	-3.8272	-0.0016848	440.2250332990426	17.328	0.27758	16.718	16.52	16.798	-0.6107	-0.081339	0.0003552	NaN	21.702	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65278	+		65176	19018	43321	43339							-0.004196202426669515
VVPHAALP	8	Unmodified	_VVPHAALP_					0	0	0			REV__ENST00000354258.4_1_6:32816511-32816804:-|nuORF	REV__ENST00000354258.4_1_6:32816511-32816804:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	401.7664489746094	2	402.242338	802.470124	0.012699	5.1082E-06	-4.0537	-0.0016306	-4.041	-0.0016255	402.2404019725606	16.333	0.18502	16.392	16.301	16.486	0.059269					13	8	3	0	0	0	0.4196	1	127	127		16.705	12.72	1	61942	+		65177	25352	43322	43340	73969	73969					0.060987384225086316
VVPHISIIGP	10	Unmodified	_VVPHISIIGP_					0	0	0			REV__ENSG00000109805|ENST00000251496|NCAPG	REV__ENSG00000109805|ENST00000251496|NCAPG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3145141601562	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.86452	1	12310	12310		30.504	3.8107	1	4038100	+		65178	17775	43323	43341	73970	73970					0.1034321023666962
VVPIGLYS	8	Unmodified	_VVPIGLYS_					0	0	0			REV__ENSG00000136002|ENST00000409359|ARHGEF4	REV__ENSG00000136002|ENST00000409359|ARHGEF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	424.25048828125	2	424.249829	846.485105	-0.18354	-7.7867E-05	0.52567	0.00022301	0.34213	0.00014515	424.2501209493524	107.39	0.88235	107.36	106.9	107.79	-0.034401					76	20	5	0	0	0	0.87276	1	11681	11681		29.842	0	1	4879200	+		65179	19279	43324	43342	73971	73971					0.05572185499852367
VVPIGLYS	8	Unmodified	_VVPIGLYS_					0	0	0			REV__ENSG00000136002|ENST00000409359|ARHGEF4	REV__ENSG00000136002|ENST00000409359|ARHGEF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.2502136230469	2	424.249829	846.485105	2.211	0.00093801	-1.2738	-0.00054042	0.93718	0.0003976	424.249377193164	107.05	1.1854	107.15	106.72	107.9	0.10396					163	44	6	0	0	0	0.87276	1	13101	13101		29.842	0	1	22757000	+		65180	19279	43324	43342	73972	73972					0.05572185499852367
VVPILLMLVC	10	Unmodified	_VVPILLMLVC_					0	0	0			REV__ENSG00000196944|ENST00000366473|OR2T4	REV__ENSG00000196944|ENST00000366473|OR2T4	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	550.3360595703125	2	550.334524	1098.6545	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.59	1	115.61	115.11	116.11	0.026466								0	0	0	0.45132	1	12683	12683		19.36	1.0356	1		+		65181	23183	43325	43343	73973	73973					0.10911422466551812
VVPINITG	8	Unmodified	_VVPINITG_					0	0	0		ENSG00000135540|ENST00000343505|NHSL1;ENST00000426841.6_1_6:138768126-138820433:-|nuORF	ENSG00000135540|ENST00000343505|NHSL1	ENSG00000135540|ENST00000343505|NHSL1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.74951171875	2	406.747453	811.480354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.03	1	116.03	115.53	116.53	-0.0021133								0	0	0	0.29245	1	13942	13942		30.504	3.7075	1				65182	4033	43326	43344	73974	73974					0.06707301357096185
VVPLQLPF	8	Unmodified	_VVPLQLPF_					0	0	0			REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	456.77923583984375	2	456.781296	911.54804	-1.7711	-0.00080902	0.5892	0.00026914	-1.1819	-0.00053989	456.781407129062	43.051	0.61514	43.484	43.212	43.828	0.4334					31	14	3	0	0	0	0.89457	2	3869	3869;3873		39.021	7.1869	1	1106100	+		65183	27479	43327	43345	73975;73976	73975					0.08872751287901792
VVPLQLPF	8	Unmodified	_VVPLQLPF_					0	0	0			REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7801208496094	2	456.781296	911.54804	-1.9195	-0.00087679	0.90189	0.00041197	-1.0176	-0.00046482	456.78157420215297	42.804	0.60901	43.502	43.299	43.908	0.69754					29	14	3	0	0	0	0.87276	1	3849	3849		29.842	0	1	1168800	+		65184	27479	43327	43345	73977	73977					0.08872751287901792
VVPLQLPF	8	Unmodified	_VVPLQLPF_					0	0	0			REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	456.781296	911.54804	-1.7711	-0.00080902	0.5892	0.00026914	-1.1819	-0.00053989	456.781407129062	43.051	0.61514	43.484	43.212	43.828	0.4334	-0.0087848	-0.00014915	NaN	29.842	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1106100	+		65185	27479	43327	43345							0.08872751287901792
VVPLQLPF	8	Unmodified	_VVPLQLPF_					0	0	0			REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	456.781296	911.54804	-1.9195	-0.00087679	0.90189	0.00041197	-1.0176	-0.00046482	456.78157420215297	42.804	0.60901	43.502	43.299	43.908	0.69754	0.0087848	0.00013652	NaN	29.842	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1168800	+		65186	27479	43327	43345							0.08872751287901792
VVPLTCMCA	9	Unmodified	_VVPLTCMCA_					0	0	0			REV__ENST00000585839.5_1_19:14580313-14582593:+|nuORF	REV__ENST00000585839.5_1_19:14580313-14582593:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7234802246094	2	468.72121	935.427866	2.8837	0.0013516	1.5145	0.00070989	4.3982	0.0020615	468.7218949032731	103.72	1.0883	103.99	103.67	104.76	0.26524					69	25	4	0	0	0	0.7932	1	12692	12692		26.796	0	1	2233300	+		65187	29095	43328	43346	73978	73978					-0.042430643640386734
VVPPTPEL	8	Unmodified	_VVPPTPEL_					0	0	0		ENSG00000173452|ENST00000405844|TMEM196	ENSG00000173452|ENST00000405844|TMEM196	ENSG00000173452|ENST00000405844|TMEM196	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	426.24560546875	2	426.247286	850.48002	-1.1835	-0.00050446	-1.6997	-0.0007245	-2.8832	-0.001229	426.24646575286147	87.846	4.0837	87.846	85.783	89.866	0					184	94	2	0	0	0	0.82464	1	8385	8385		21.702	0	1	2605100			65188	6859	43329	43347	73979	73979					0.04879881637236849
VVPPTPEL	8	Unmodified	_VVPPTPEL_					0	0	0		ENSG00000173452|ENST00000405844|TMEM196	ENSG00000173452|ENST00000405844|TMEM196	ENSG00000173452|ENST00000405844|TMEM196	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	426.2459716796875	2	426.247286	850.48002	-0.1821	-7.7619E-05	-2.626	-0.0011193	-2.8081	-0.0011969	426.24606184674775	87.737	4.0012	87.805	85.686	89.687	0.067711					181	93	4	0	0	0	0.88915	1	8884	8884		35.201	0	1	3805200			65189	6859	43329	43347	73980	73980					0.04879881637236849
VVPRPFLRLT	10	Unmodified	_VVPRPFLRLT_					0	0	0			REV__nc|ENSG00000110514|Q8WXG6-6|MADD	REV__nc|ENSG00000110514|Q8WXG6-6|MADD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	599.3796997070312	2	599.376958	1196.73936	2.9711	0.0017808	3.7107	0.0022241	6.6818	0.0040049	599.3789549503108	103.1	1.3745	103.39	103.15	104.53	0.28442					60	34	3	0	0	0	0.8488	1	12565	12565		17.365	1.3582	1	1766200	+		65190	17820	43330	43348	73981	73981					0.14886252319024607
VVPSLLLSV	9	Unmodified	_VVPSLLLSV_					0	0	0		ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	463.8004455566406	2	463.799686	925.584819	0.22161	0.00010278	1.3447	0.00062365	1.5663	0.00072643	463.8001289645521	44.42	2.5705	44.397	42.612	45.182	-0.023079					191	60	4	0	0	0	0.7932	1	3541	3541		12.959	0	1	1570500			65191	4415	43331	43349	73982	73982					0.11905003113815837
VVPTYLAL	8	Unmodified	_VVPTYLAL_					0	0	0			REV__ENSG00000135744|ENST00000366667|AGT	REV__ENSG00000135744|ENST00000366667|AGT	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	438.26373291015625	2	438.265479	874.516405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.887	1	45.858	45.358	46.358	-0.028782								0	0	0	0.29353	1	3740	3740		28.254	0	1		+		65192	19244	43332	43350	73983	73983					0.07412758533939723
VVPVLKMN	8	Unmodified	_VVPVLKMN_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.27459716796875	2	450.272781	898.531009	-0.14122	-6.3587E-05	3.6649	0.0016502	3.5237	0.0015866	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.81548	1	9833	9833		20.482	1.1219	1	47650000	+		65193	21919	43333	43351	73984	73984					0.07768507410457914
VVPVLKMN	8	Unmodified	_VVPVLKMN_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2745666503906	2	450.272781	898.531009	1.7291	0.00077856	1.6772	0.00075519	3.4063	0.0015338	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.81548	2	10025	10025;10049		35.201	13.241	1	51820000	+		65194	21919	43333	43351	73985;73986	73985					0.07768507410457914
VVPVLKMN	8	Unmodified	_VVPVLKMN_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.27435302734375	2	450.272781	898.531009	0.49619	0.00022342	3.4958	0.0015741	3.992	0.0017975	450.2742908789494	92.742	1.9986	93.189	92.476	94.475	0.44661					184	49	6	0	0	0	0.90465	1	10983	10983		40.573	21.213	1	16577000	+		65195	21919	43333	43351	73987	73987					0.07768507410457914
VVPVLKMN	8	Unmodified	_VVPVLKMN_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	450.2745056152344	2	450.272781	898.531009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.71	1	113.73	113.23	114.23	0.020027								0	0	0	0.30125	1	13728	13728		20.482	0	1		+		65196	21919	43333	43351	73988	73988					0.07768507410457914
VVPVLKMN	8	Unmodified	_VVPVLKMN_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.774169921875	2	450.272781	898.531009	5.2415	0.0023601	-0.81228	-0.00036575	4.4292	0.0019944	450.27236916229054	109.04	0.40962	109.13	108.89	109.3	0.09005					29	17	2	0	0	0	0.88915	1	13273	13273		35.201	14.719	1	701350	+		65197	21919	43333	43351	73989	73989					0.07768507410457914
VVPVLKMN	8	Unmodified	_VVPVLKMN_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	450.272781	898.531009	2.7539	0.00124	-2.6725	-0.0012033	0.081411	3.6657E-05	450.2706161396185	109.01	0.46602	108.98	108.75	109.21	-0.029381	-0.073179	-0.0025142	NaN	35.201	22	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	619800	+		65198	21919	43333	43351							0.07768507410457914
VVPVLKMN	8	Unmodified	_VVPVLKMN_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	450.272781	898.531009	1.3296	0.0005987	2.8427	0.00128	4.1724	0.0018787	450.2740926107481	109.01	0.39967	109.04	108.85	109.25	0.034355	-0.0075736	0.0024525	NaN	35.201	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	780120	+		65199	21919	43333	43351							0.07768507410457914
VVPVLKMN	8	Unmodified	_VVPVLKMN_					0	0	0			REV__ENSG00000173402|ENST00000308775|DAG1	REV__ENSG00000173402|ENST00000308775|DAG1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	450.272781	898.531009	5.2415	0.0023601	-0.81228	-0.00036575	4.4292	0.0019944	450.27236916229054	109.04	0.40962	109.13	108.89	109.3	0.09005	0.080753	-0.00083905	NaN	35.201	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	701350	+		65200	21919	43333	43351							0.07768507410457914
VVPVWKFIRLS	11	Unmodified	_VVPVWKFIRLS_					0	0	0			REV__ENSG00000099385|ENST00000215115|BCL7C	REV__ENSG00000099385|ENST00000215115|BCL7C	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	448.6087951660156	3	448.611452	1342.81253	-1.2633	-0.00056673	-3.2803	-0.0014716	-4.5436	-0.0020383	448.6098135083333	82.528	1.0923	82.528	81.965	83.057	0					63	26	3	0	0	0	0.78391	1	7712	7712		14.694	1.1857	1	108390	+		65201	17095	43334	43352	73990	73990					0.15483381041644861
VVPVWKFIRLS	11	Unmodified	_VVPVWKFIRLS_					0	0	0			REV__ENSG00000099385|ENST00000215115|BCL7C	REV__ENSG00000099385|ENST00000215115|BCL7C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	448.611452	1342.81253	-0.14456	-6.485E-05	-4.4283	-0.0019866	-4.5729	-0.0020514	448.6092662471008	82.135	1.1733	82.201	81.613	82.787	0.06591	0.17027	-0.0001277	NaN	14.694	62	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	204290	+		65202	17095	43334	43352							0.15483381041644861
VVPVWKFIRLS	11	Unmodified	_VVPVWKFIRLS_					0	0	0			REV__ENSG00000099385|ENST00000215115|BCL7C	REV__ENSG00000099385|ENST00000215115|BCL7C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	448.611452	1342.81253	0.4656	0.00020887	-5.0694	-0.0022742	-4.6038	-0.0020653	448.60899088902295	82.259	1.2913	82.196	81.64	82.932	-0.062943	0.16578	-0.0009905	NaN	14.694	75	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	216310	+		65203	17095	43334	43352							0.15483381041644861
VVPVWKFIRLS	11	Unmodified	_VVPVWKFIRLS_					0	0	0			REV__ENSG00000099385|ENST00000215115|BCL7C	REV__ENSG00000099385|ENST00000215115|BCL7C	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	448.611452	1342.81253	0.94225	0.00042271	-5.5794	-0.002503	-4.6372	-0.0020803	448.6087475838069	81.99	1.1366	82.048	81.636	82.773	0.057808	0.017674	-0.0016769	NaN	14.694	75	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	201600	+		65204	17095	43334	43352							0.15483381041644861
VVPVWKFIRLS	11	Unmodified	_VVPVWKFIRLS_					0	0	0			REV__ENSG00000099385|ENST00000215115|BCL7C	REV__ENSG00000099385|ENST00000215115|BCL7C	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	448.611452	1342.81253	-1.3005	-0.0005834	-3.383	-0.0015177	-4.6835	-0.0021011	448.6097409100058	81.789	1.0517	81.934	81.405	82.457	0.14513	-0.096191	0.0012791	NaN	14.694	62	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224800	+		65205	17095	43334	43352							0.15483381041644861
VVPVWKFIRLS	11	Unmodified	_VVPVWKFIRLS_					0	0	0			REV__ENSG00000099385|ENST00000215115|BCL7C	REV__ENSG00000099385|ENST00000215115|BCL7C	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	448.611452	1342.81253	0.58079	0.00026055	-5.3476	-0.002399	-4.7668	-0.0021384	448.608937734992	81.778	0.91669	81.923	81.501	82.418	0.1455	-0.10725	-0.0013649	NaN	14.694	54	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	223660	+		65206	17095	43334	43352							0.15483381041644861
VVPVWKFIRLS	11	Unmodified	_VVPVWKFIRLS_					0	0	0			REV__ENSG00000099385|ENST00000215115|BCL7C	REV__ENSG00000099385|ENST00000215115|BCL7C	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	448.611452	1342.81253	-1.5636	-0.00070145	-3.0892	-0.0013859	-4.6528	-0.0020873	448.6099179419758	81.765	1.0478	81.879	81.438	82.486	0.11426	-0.15094	0.0016745	NaN	14.694	60	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	251400	+		65207	17095	43334	43352							0.15483381041644861
VVPVWKFIRLS	11	Unmodified	_VVPVWKFIRLS_					0	0	0			REV__ENSG00000099385|ENST00000215115|BCL7C	REV__ENSG00000099385|ENST00000215115|BCL7C	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	448.611452	1342.81253	-0.95749	-0.00042954	-3.8222	-0.0017147	-4.7797	-0.0021442	448.609635677379	81.288	1.1179	81.71	81.268	82.386	0.4215	-0.32079	0.00068806	NaN	14.694	49	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	252440	+		65208	17095	43334	43352							0.15483381041644861
VVPVWKFIRLS	11	Unmodified	_VVPVWKFIRLS_					0	0	0			REV__ENSG00000099385|ENST00000215115|BCL7C	REV__ENSG00000099385|ENST00000215115|BCL7C	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	448.611452	1342.81253	0.10383	4.658E-05	-4.7613	-0.002136	-4.6575	-0.0020894	448.609107595864	81.354	0.92471	81.854	81.379	82.304	0.49966	-0.17665	-0.00057588	NaN	14.694	44	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	287470	+		65209	17095	43334	43352							0.15483381041644861
VVQGKRVN	8	Unmodified	_VVQGKRVN_					0	0	0		chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.27447509765625	2	450.274701	898.534849	-1.1013	-0.00049589	0.52036	0.00023431	-0.58095	-0.00026159	450.27489716233197	93.429	4.2655	93.429	92.808	97.074	0					256	99	6	0	0	0	0.84341	4	9306	9174;9282;9306;9514		31.955	1.4512	1	26247000			65210	415	43335	43353	73991;73992;73993;73994	73993					0.08152313228515595
VVQGKRVN	8	Unmodified	_VVQGKRVN_					0	0	0		chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2741394042969	2	450.274701	898.534849	-0.14122	-6.3587E-05	-0.59901	-0.00026972	-0.74022	-0.0003333	450.2744222767708	93.167	5.0199	93.237	92.069	97.089	0.06987					369	118	6	0	0	0	0.87922	2	9687	9687;9961		31.955	5.1588	1	47650000			65211	415	43335	43353	73995;73996	73995					0.08152313228515595
VVQGKRVN	8	Unmodified	_VVQGKRVN_					0	0	0		chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.2744140625	2	450.274701	898.534849	1.7291	0.00077856	-2.5867	-0.0011647	-0.8576	-0.00038615	450.2735305483554	93.167	4.4193	93.106	92.42	96.839	-0.061432					328	104	6	0	0	0	0.85277	4	9821	9821;9856;9916;9928		31.955	1.4512	1	51820000			65212	415	43335	43353	73997;73998;73999;74000	73997					0.08152313228515595
VVQGKRVN	8	Unmodified	_VVQGKRVN_					0	0	0		chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27386474609375	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.48	1	114.45	113.95	114.95	-0.024452								0	0	0	0.29631	1	12684	12684		25.45	6.0902	1				65213	415	43335	43353	74001	74001					0.08152313228515595
VVQGKRVN	8	Unmodified	_VVQGKRVN_					0	0	0		chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2741394042969	2	450.274701	898.534849	-1.2506	-0.00056311	0.52833	0.00023789	-0.72226	-0.00032522	450.27491426789436	92.912	2.8672	93.137	92.111	94.978	0.22548					234	68	5	0	0	0	0.85277	2	9448	9448;9496		30.504	2.6214	1	44812000			65214	415	43335	43353	74002;74003	74002					0.08152313228515595
VVQGKRVN	8	Unmodified	_VVQGKRVN_					0	0	0		chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2741394042969	2	450.274701	898.534849	-1.7763	-0.00079984	1.0964	0.00049366	-0.67999	-0.00030618	450.2751475293278	92.935	2.4563	93.128	92.478	94.934	0.19239					222	58	5	0	0	0	0.85277	5	9369	9369;9381;9405;9429;9453		25.45	2.4077	1	35178000			65215	415	43335	43353	74004;74005;74006;74007;74008	74004					0.08152313228515595
VVQGKRVN	8	Unmodified	_VVQGKRVN_					0	0	0		chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	chr4:108884222-108889221|15|23.73|0.68|5.12|-|1|COL25A1,COL25A1|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	450.27447509765625	2	450.274701	898.534849	-0.39172	-0.00017638	0.081036	3.6488E-05	-0.31068	-0.00013989	450.27467380841404	92.855	2.4882	93.305	92.646	95.134	0.44989					209	61	6	0	0	0	0.87922	1	11157	11157		31.955	0.42505	1	19085000			65216	415	43335	43353	74009	74009					0.08152313228515595
VVQGTYFV	8	Unmodified	_VVQGTYFV_					0	0	0			REV__ENSG00000148843|ENST00000369797|PDCD11	REV__ENSG00000148843|ENST00000369797|PDCD11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	456.7930908203125	2	456.744911	911.475269	0.64968	0.00029674	-0.77903	-0.00035582	-0.12935	-5.9079E-05	456.7445737255839	37.178	0.78338	37.664	37.242	38.025	0.48581					43	18	4	0	0	0	0.4196	1	2972	2972		54.765	2.4655	1	230330	+		65217	20142	43336	43354	74010	74010					0.015989974944773166
VVQKETGA	8	Unmodified	_VVQKETGA_					0	0	0			REV__ENST00000470209.5_1_X:153173185-153178999:-|nuORF	REV__ENST00000470209.5_1_X:153173185-153178999:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	416.80877685546875	2	416.232168	830.449782	1.2865	0.00053547	-0.028346	-1.1799E-05	1.2581	0.00052367	416.23221891969257	19.457	0.7915	18.988	18.7	19.491	-0.46967					21	16	2	0	0	0	0.4196	1	517	517		42.474	13.325	1	78881	+		65218	16977	43337	43355	74011	74011					0.027775229720305106
VVQKTLLRVA	10	Unmodified	_VVQKTLLRVA_					0	0	0			REV__nc|ENSG00000127603|Q9UPN3|MACF1	REV__nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	563.8701782226562	2	563.868966	1125.72338	0.29998	0.00016915	-0.3506	-0.00019769	-0.05062	-2.8543E-05	563.8686315465658	15.19	0.31397	15.239	15.137	15.451	0.049079					21	11	3	0	0	0	0.84816	1	14	14		17.468	0.10304	1	162300	+		65219	18743	43338	43356	74012	74012					0.1655454608214768
VVQLASEAAMA	11	Unmodified	_VVQLASEAAMA_					0	0	0			REV__nc|ENSG00000011007|Q14241-1|ELOA	REV__nc|ENSG00000011007|Q14241-1|ELOA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.316650390625	2	545.284074	1088.5536	1.2596	0.00068682	-0.68301	-0.00037243	0.57656	0.00031439	545.2833382138222	90.448	0.37602	90.494	90.219	90.595	0.046448					11	8	2	0	0	0	0.17502	1	9353	9353		29.17	0	1	72011	+		65220	29673	43339	43357	74013	74013					0.012860620173796633
VVQLQPGRSYI	11	Unmodified	_VVQLQPGRSYI_					0	0	0		nc|ENSG00000186628|A1L4K1-2|FSD2;ENSG00000186628|ENST00000334574|FSD2	nc|ENSG00000186628|A1L4K1-2|FSD2	nc|ENSG00000186628|A1L4K1-2|FSD2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.8601684570312	2	630.358962	1258.70337	1.3322	0.00083973	-1.4046	-0.00088538	-0.072421	-4.5651E-05	630.3578781034934	46.804	0.71899	46.823	46.565	47.284	0.018967					42	19	3	0	0	0	0.59831	1	3501	3501		28.081	0	1	498040			65221	7807	43340	43358	74014	74014					0.08436750351529554
VVQLSIPAM	9	Unmodified	_VVQLSIPAM_					0	0	0			REV__ENSG00000100385|ENST00000216223|IL2RB	REV__ENSG00000100385|ENST00000216223|IL2RB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27734375	2	479.275521	956.536489	-0.098426	-4.7173E-05	3.9538	0.001895	3.8554	0.0018478	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.77546	1	8266	8266		31.955	0	1	1929800	+		65222	17186	43341	43359	74015	74015					0.05648186202256511
VVQLSIPAM	9	Unmodified	_VVQLSIPAM_					0	0	0			REV__ENSG00000100385|ENST00000216223|IL2RB	REV__ENSG00000100385|ENST00000216223|IL2RB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2774658203125	2	479.275521	956.536489	-0.098244	-4.7086E-05	4.0257	0.0019294	3.9274	0.0018823	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.77546	2	8565	8565;8577		31.955	4.0726	1	6799600	+		65223	17186	43341	43359	74016;74017	74016					0.05648186202256511
VVQLSIPAM	9	Unmodified	_VVQLSIPAM_					0	0	0			REV__ENSG00000100385|ENST00000216223|IL2RB	REV__ENSG00000100385|ENST00000216223|IL2RB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2772521972656	2	479.275521	956.536489	0.53004	0.00025403	3.2196	0.0015431	3.7496	0.0017971	479.2769502706719	82.184	3.0411	82.121	80.248	83.29	-0.062935					242	73	5	0	0	0	0.77546	2	8396	8396;8433		31.955	1.4512	1	2070000	+		65224	17186	43341	43359	74018;74019	74018					0.05648186202256511
VVQLSIPAM	9	Unmodified	_VVQLSIPAM_					0	0	0			REV__ENSG00000100385|ENST00000216223|IL2RB	REV__ENSG00000100385|ENST00000216223|IL2RB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.277587890625	2	479.275521	956.536489	0.61468	0.0002946	3.1717	0.0015201	3.7864	0.0018147	479.27691691074784	81.952	3.1313	82.097	80.218	83.35	0.1455					231	79	4	0	0	0	0.67345	1	8020	8020		42.396	5.237	1	1802300	+		65225	17186	43341	43359	74020	74020					0.05648186202256511
VVQLSIPAM	9	Unmodified	_VVQLSIPAM_					0	0	0			REV__ENSG00000100385|ENST00000216223|IL2RB	REV__ENSG00000100385|ENST00000216223|IL2RB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27764892578125	2	479.275521	956.536489	0.63867	0.0003061	3.2635	0.0015641	3.9021	0.0018702	479.27698226685766	84.247	6.7714	84.395	83.313	90.084	0.14794					479	158	4	0	0	0	0.51307	6	8458	8222;8318;8342;8390;8458;8524		51.335	8.6178	1	6593200	+		65226	17186	43341	43359	74021;74022;74023;74024;74025;74026	74025					0.05648186202256511
VVQLSIPAM	9	Unmodified	_VVQLSIPAM_					0	0	0			REV__ENSG00000100385|ENST00000216223|IL2RB	REV__ENSG00000100385|ENST00000216223|IL2RB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2775573730469	2	479.275521	956.536489	0.29447	0.00014113	3.9243	0.0018808	4.2188	0.0020219	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.74721	2	9943	9643;9943		37.159	0	1	5642300	+		65227	17186	43341	43359	74027;74028	74028					0.05648186202256511
VVQQVVGDDS	10	Unmodified	_VVQQVVGDDS_					0	0	0		ENST00000609975.1_1_2:96191991-96192402:-|nuORF	ENST00000609975.1_1_2:96191991-96192402:-|nuORF	ENST00000609975.1_1_2:96191991-96192402:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3035278320312	2	523.261653	1044.50875	1.6093	0.0008421	-3.8788	-0.0020296	-2.2695	-0.0011875	523.2599788723478	88.266	0.32837	88.192	88.03	88.358	-0.074005					9	7	2	0	0	0	0.37624	1	9160	9160		39.253	11.371	1	47968			65228	14492	43342	43360	74029	74029					-0.011720455242993921
VVQRALNSA	9	Unmodified	_VVQRALNSA_					0	0	0		ENSG00000106771|ENST00000374586|TMEM245;nc|ENSG00000106771|Q9H330-3|TMEM245	ENSG00000106771|ENST00000374586|TMEM245	ENSG00000106771|ENST00000374586|TMEM245	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27740478515625	2	479.277441	956.540328	-0.83282	-0.00039915	0.69096	0.00033116	-0.14187	-6.7993E-05	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.71772	3	8129	8129;8158;8170		39.253	6.4404	1	7438100			65229	2316	43343	43361	74030;74031;74032	74030					0.06031992020314192
VVQRALNSA	9	Unmodified	_VVQRALNSA_					0	0	0		ENSG00000106771|ENST00000374586|TMEM245;nc|ENSG00000106771|Q9H330-3|TMEM245	ENSG00000106771|ENST00000374586|TMEM245	ENSG00000106771|ENST00000374586|TMEM245	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774963378906	2	479.277441	956.540328	-1.4767	-0.00070776	1.2895	0.00061801	-0.18726	-8.9751E-05	479.2779331367612	82.045	2.87	82.159	80.414	83.285	0.11426					180	69	3	0	0	0	0.7932	1	7842	7842		25.574	0	1	1785900			65230	2316	43343	43361	74033	74033					0.06031992020314192
VVQRALNSA	9	Unmodified	_VVQRALNSA_					0	0	0		ENSG00000106771|ENST00000374586|TMEM245;nc|ENSG00000106771|Q9H330-3|TMEM245	ENSG00000106771|ENST00000374586|TMEM245	ENSG00000106771|ENST00000374586|TMEM245	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.2774658203125	2	479.277441	956.540328	-1.5678	-0.00075141	1.4775	0.00070814	-0.090269	-4.3264E-05	479.27804674433713	84.242	7.1536	84.392	82.733	89.886	0.14951					463	166	5	0	0	0	0.77244	1	8362	8362		32.812	1.1781	1	6441000			65231	2316	43343	43361	74034	74034					0.06031992020314192
VVQRALNSA	9	Unmodified	_VVQRALNSA_					0	0	0		ENSG00000106771|ENST00000374586|TMEM245;nc|ENSG00000106771|Q9H330-3|TMEM245	ENSG00000106771|ENST00000374586|TMEM245	ENSG00000106771|ENST00000374586|TMEM245	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.2777099609375	2	479.277441	956.540328	-0.95083	-0.00045571	1.1534	0.0005528	0.20258	9.7094E-05	479.27791477711264	84.037	6.434	84.492	83.438	89.872	0.45555					450	157	5	0	0	0	0.77244	1	9784	9784		32.812	3.6629	1	6350300			65232	2316	43343	43361	74035	74035					0.06031992020314192
VVQRHSSA	8	Unmodified	_VVQRHSSA_					0	0	0		ENST00000565644.5_1_16:87864928-87865366:-|nuORF	ENST00000565644.5_1_16:87864928-87865366:-|nuORF	ENST00000565644.5_1_16:87864928-87865366:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2413024902344	2	442.240858	882.467164	-0.15416	-6.8174E-05	0.40953	0.00018111	0.25537	0.00011293	442.24093420715104	81.537	7.6668	81.601	77.797	85.464	0.064384					509	207	4	0	0	0	0.88601	1	7636	7636		34.173	1.3601	1	1068200			65233	13918	43344	43362	74036	74036					0.021228632976999506
VVQRHSSA	8	Unmodified	_VVQRHSSA_					0	0	0		ENST00000565644.5_1_16:87864928-87865366:-|nuORF	ENST00000565644.5_1_16:87864928-87865366:-|nuORF	ENST00000565644.5_1_16:87864928-87865366:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	442.24078369140625	2	442.240858	882.467164	1.3093	0.00057901	-1.2176	-0.00053849	0.091628	4.0522E-05	442.24026313402175	81.307	5.2788	81.365	80.135	85.414	0.057808					369	124	5	0	0	0	0.89494	2	8019	8019;8091		40.573	1.5408	1	1244000			65234	13918	43344	43362	74037;74038	74037					0.021228632976999506
VVQRHSSA	8	Unmodified	_VVQRHSSA_					0	0	0		ENST00000565644.5_1_16:87864928-87865366:-|nuORF	ENST00000565644.5_1_16:87864928-87865366:-|nuORF	ENST00000565644.5_1_16:87864928-87865366:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	442.2406311035156	2	442.240858	882.467164	-1.5813	-0.00069932	1.7685	0.0007821	0.18717	8.2776E-05	442.24154357391166	81.368	5.0959	81.482	80.232	85.328	0.11426					294	122	3	0	0	0	0.87922	2	7728	7728;7812		45.952	8.1404	1	968500			65235	13918	43344	43362	74039;74040	74039					0.021228632976999506
VVQRLVERGR	10	Unmodified	_VVQRLVERGR_					0	0	0		nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST	nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001-8|DST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	606.3692016601562	2	606.370195	1210.72584	2.2948	0.0013915	-3.4602	-0.0020982	-1.1655	-0.00070671	606.3679986963975	94.415	3.2479	94.356	93.249	96.497	-0.059212					198	76	3	0	0	0	0.86698	1	10051	10051		28.081	0.19925	1	800340			65236	5149	43345	43363	74041	74041					0.12890394539772387
VVQSIKLI	8	Unmodified	_VVQSIKLI_					0	0	0		ENSG00000166411|ENST00000299518|IDH3A;nc|ENSG00000166411|P50213-2|IDH3A;ENST00000558509.5_1_15:78453927-78455839:+|nuORF	ENSG00000166411|ENST00000299518|IDH3A	ENSG00000166411|ENST00000299518|IDH3A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	450.2743835449219	2	450.299853	898.585153	-0.14117	-6.3568E-05	-0.49532	-0.00022304	-0.63649	-0.00028661	450.298951828437	93.159	0.52804	93.229	92.97	93.498	0.06987					22	12	3	0	0	0	0.4196	1	9699	9699		35.618	7.736	1	162170			65237	6192	43346	43364	74042	74042					0.13180422833659122
VVQSLLRDF	9	Unmodified	_VVQSLLRDF_					0	0	0		nc|ENSG00000166016|Q8N961-2|ABTB2;ENSG00000166016|ENST00000435224|ABTB2	nc|ENSG00000166016|Q8N961-2|ABTB2	nc|ENSG00000166016|Q8N961-2|ABTB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.8067626953125	2	538.808574	1075.60259	0.058912	3.1742E-05	-3.5667	-0.0019218	-3.5078	-0.00189	538.806607108325	90.57	3.5579	90.787	89.308	92.866	0.21737					211	84	4	0	0	0	0.77696	1	9049	9049		31.53	2.3598	1	874780			65238	6149	43347	43365	74043	74043					0.06781718368665679
VVQTTLPAIL	10	Unmodified	_VVQTTLPAIL_					0	0	0		nc|ENSG00000058804|Q9BTX1-3|NDC1;nc|ENSG00000058804|Q9BTX1-6|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;nc|ENSG00000058804|Q9BTX1-2|NDC1;ENSG00000058804|ENST00000371429|NDC1	nc|ENSG00000058804|Q9BTX1-3|NDC1	nc|ENSG00000058804|Q9BTX1-3|NDC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.3283081054688	2	527.828975	1053.6434	-0.99691	-0.0005262	-3.8211	-0.0020169	-4.818	-0.0025431	528.3277851564699	44.24	1.2179	45.085	44.736	45.954	0.84438					44	29	2	0	0	0	0.86471	1	4049	4049		30.318	4.8675	1	1022900			65239	1048	43348	43366	74044	74044					0.11872059688289482
VVQVLERY	8	Unmodified	_VVQVLERY_					0	0	0			REV__ENSG00000145860|ENST00000424310|RNF145	REV__ENSG00000145860|ENST00000424310|RNF145	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	503.2920837402344	2	503.290017	1004.56548	0.80608	0.00040569	2.1927	0.0011036	2.9988	0.0015092	503.2909725186853	109.68	1.4053	109.76	109.44	110.85	0.078552					88	52	3	0	0	0	0.85277	1	11819	11819		25.45	1.2474	1	1533800	+		65240	19972	43349	43367	74045	74045					0.0633804682288428
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	457.2640686035156	2	457.264333	912.514114	-1.2409	-0.00056743	1.2943	0.00059182	0.053338	2.439E-05	457.2647965015651	82.142	7.7691	82.142	80.567	88.336	0					577	196	5	0	0	0	0.87922	2	7703	7606;7703		33.516	5.2619	1	2957200			65241	13531	43350	43368	74046;74047	74047					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2635192871094	2	457.264333	912.514114	-0.13162	-6.0186E-05	0.19173	8.7669E-05	0.060104	2.7483E-05	457.26428279754407	79.805	3.1963	79.865	77.853	81.05	0.059349					256	102	5	0	0	0	0.90465	2	7745	7745;7924		45.952	4.9543	1	1194000			65242	13531	43350	43368	74048;74049	74048					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	457.2641906738281	2	457.264333	912.514114	-0.13145	-6.011E-05	0.066126	3.0237E-05	-0.065329	-2.9873E-05	457.26425453209083	82.217	7.9505	82.283	80.483	88.433	0.06591					554	184	5	0	0	0	0.87479	2	8087	8040;8087		31.955	3.7075	1	4511100			65243	13531	43350	43368	74050;74051	74051					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.2640075683594	2	457.264333	912.514114	0.21557	9.8573E-05	-0.19878	-9.0895E-05	0.016791	7.678E-06	457.264123150785	79.852	3.0094	79.796	77.952	80.962	-0.056503					250	92	3	0	0	0	0.85277	3	7970	7970;8009;8120		38.806	6.6555	1	1366100			65244	13531	43350	43368	74052;74053;74054	74052					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26409912109375	2	457.264333	912.514114	0.52869	0.00024175	-0.63261	-0.00028927	-0.10392	-4.7519E-05	457.2639445753035	82.058	8.1792	81.995	80.75	88.929	-0.062935					557	191	5	0	0	0	0.87479	2	8260	8260;8695		38.806	8.9646	1	4885100			65245	13531	43350	43368	74055;74056	74055					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2637023925781	2	457.264333	912.514114	0.26759	0.00012236	-0.24182	-0.00011058	0.025769	1.1783E-05	457.2640982028123	79.64	3.2237	79.694	77.681	80.905	0.053841					243	103	3	0	0	0	0.89962	1	7995	7995		38.806	1.647	1	1458600			65246	13531	43350	43368	74057	74057					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	457.2641296386719	2	457.264333	912.514114	0.43755	0.00020008	-0.55882	-0.00025553	-0.12127	-5.5452E-05	457.26396645342277	81.956	9.162	82.014	80.157	89.319	0.057808					601	215	5	0	0	0	0.87922	4	8268	8044;8102;8268;8357		38.806	6.8513	1	4814400			65247	13531	43350	43368	74058;74059;74060;74061	74060					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2639465332031	2	457.264333	912.514114	-1.1676	-0.0005339	1.2243	0.00055981	0.056665	2.5911E-05	457.2647584200524	79.635	3.4233	79.766	77.494	80.918	0.13085					307	112	5	0	0	0	0.87922	1	7568	7568		31.955	5.1588	1	1329900			65248	13531	43350	43368	74062	74062					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	457.2637634277344	2	457.264333	912.514114	-1.1625	-0.00053158	1.0336	0.00047261	-0.12896	-5.8971E-05	457.2647159601465	81.773	8.4686	81.918	80.427	88.895	0.14513					566	200	6	0	0	0	0.87479	3	7769	7769;7802;7814		40.573	7.736	1	4732500			65249	13531	43350	43368	74063;74064;74065	74063					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	457.2640380859375	2	457.264333	912.514114	0.59672	0.00027286	-0.70009	-0.00032012	-0.10337	-4.7267E-05	457.26392170814864	81.933	8.6519	82.079	80.438	89.09	0.1455					505	204	4	0	0	0	0.84341	7	7979	7786;7798;7810;7858;7870;7979;8165		50.025	14.406	1	4597500			65250	13531	43350	43368	74066;74067;74068;74069;74070;74071;74072	74071					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.2640380859375	2	457.264333	912.514114	-1.4614	-0.00066827	1.5119	0.00069134	0.050452	2.307E-05	457.26487996608347	79.718	3.1836	79.817	77.763	80.946	0.098694					285	104	5	0	0	0	0.87479	2	7509	7509;7534		47.916	17.412	1	1032000			65251	13531	43350	43368	74073;74074	74073					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	457.26318359375	2	457.264333	912.514114	-1.5615	-0.00071403	1.4858	0.00067941	-0.075692	-3.4611E-05	457.2649058150629	82.002	8.81	82.116	80.474	89.284	0.11426					558	207	5	0	0	0	0.84341	6	7637	7637;7647;7702;7757;8063;8112		40.573	10.069	1	4061400			65252	13531	43350	43368	74075;74076;74077;74078;74079;74080	74075					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.2631530761719	2	457.264333	912.514114	-0.73369	-0.00033549	0.73239	0.0003349	-0.0013027	-5.9568E-07	457.26455633568185	79.517	3.0273	79.933	78.153	81.18	0.41621					150	71	3	0	0	0	0.89494	2	9063	9063;9111		38.806	1.647	1	894880			65253	13531	43350	43368	74081;74082	74081					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	457.263427734375	2	457.264333	912.514114	-0.94036	-0.00042999	0.94492	0.00043208	0.0045525	2.0817E-06	457.2646562638552	81.811	7.3103	82.237	80.684	87.995	0.42645					450	178	4	0	0	0	0.85277	3	9662	9281;9361;9662		57.811	23.639	1	3505500			65254	13531	43350	43368	74083;74084;74085	74085					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.2626037597656	2	457.264333	912.514114	-0.11988	-5.4815E-05	0.13028	5.9574E-05	0.010409	4.7595E-06	457.26428644836	79.385	2.7838	79.935	78.442	81.226	0.54945					170	65	4	0	0	0	0.87922	2	9280	9268;9280		38.806	4.0726	1	1064700			65255	13531	43350	43368	74086;74087	74087					0.054357228488470355
VVQVQRAN	8	Unmodified	_VVQVQRAN_					0	0	0		ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	ENST00000542466.2_1_12:58120838-58121579:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	457.26385498046875	2	457.264333	912.514114	-0.039887	-1.8239E-05	0.039839	1.8217E-05	-4.797E-05	-2.1935E-08	457.2642507049852	81.841	6.4197	82.341	81.134	87.554	0.49967					398	157	4	0	0	0	0.87479	1	9652	9652		30.504	0	1	4402400			65256	13531	43350	43368	74088	74088					0.054357228488470355
VVQYVPRP	8	Unmodified	_VVQYVPRP_					0	0	0		nc|ENSG00000124900|Q9BSJ1-2|TRIM51;ENSG00000124900|ENST00000449290|TRIM51	nc|ENSG00000124900|Q9BSJ1-2|TRIM51	nc|ENSG00000124900|Q9BSJ1-2|TRIM51	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.27777099609375	2	479.279452	956.544351	-0.83282	-0.00039915	-3.5057	-0.0016802	-4.3385	-0.0020794	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.90465	1	8442	8442		40.573	1.7665	1	7438100			65257	3368	43351	43369	74089	74089					0.0643408151404401
VVREEMEKV	9	Unmodified	_VVREEMEKV_					0	0	0		nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906|ILF3;ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF	nc|ENSG00000129351|Q12906-5|ILF3	nc|ENSG00000129351|Q12906-5|ILF3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.33984375	2	559.797349	1117.58014	3.2513	0.0018201	-0.43343	-0.00024263	2.8178	0.0015774	559.7994730503433	103.3	0.37217	103.57	103.3	103.67	0.26524					10	8	2	0	0	0	0.20789	1	12600	12600		27.882	6.9353	1	305340			65258	3584	43352	43370	74090	74090					0.02605750908742266
VVRELVKYT	9	Unmodified	_VVRELVKYT_					0	0	0		ENSG00000187790|ENST00000267430|FANCM;nc|ENSG00000187790|Q8IYD8-2|FANCM	ENSG00000187790|ENST00000267430|FANCM	ENSG00000187790|ENST00000267430|FANCM	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.8301391601562	2	553.832049	1105.64954	0.85523	0.00047365	-3.799	-0.002104	-2.9438	-0.0016304	553.8298333755482	102.43	0.63957	102.57	102.26	102.9	0.13523					38	15	3	0	0	0	0.78536	1	10796	10796		29.15	4.9468	1	443280			65259	7881	43353	43371	74091	74091					0.10094577919812764
VVRGLPKG	8	Unmodified	_VVRGLPKG_					0	0	0			REV__ENST00000492149.1_1_10:81107262-81109515:+|nuORF	REV__ENST00000492149.1_1_10:81107262-81109515:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	413.26763916015625	2	413.268887	824.523222	0.1823	7.5338E-05	-3.8676	-0.0015984	-3.6853	-0.001523	413.2670592617228	39.982	2.3835	40.063	38.108	40.491	0.081345					113	70	3	0	0	0	0.80706	1	2355	2355		19.36	0	1	268720	+		65260	17698	43354	43372	74092	74092					0.1039411620519104
VVRHGGPD	8	Unmodified	_VVRHGGPD_					0	0	0		nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;ENSG00000154529|ENST00000377561|CNTNAP3B;ENST00000435173.1_9:65585783-65602755:+|nuORF	nc|ENSG00000154529|Q96NU0-2|CNTNAP3B	nc|ENSG00000154529|Q96NU0-2|CNTNAP3B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	418.9073791503906	2	418.722301	835.43005	1.2016	0.00050315	-0.56984	-0.0002386	0.63178	0.00026454	418.72185681238795	19.89	0.23531	19.421	19.303	19.538	-0.46967					6	4	2	0	0	0	0.4196	1	562	562		30.504	12.179	1	23837			65261	5283	43355	43373	74093	74093					0.005751917519432936
VVRKKKHKKV	10	Unmodified	_VVRKKKHKKV_					0	0	0			REV__nc|ENSG00000135506|Q13438-6|OS9	REV__nc|ENSG00000135506|Q13438-6|OS9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.4304809570312	2	625.432599	1248.85064	2.9227	0.0018279	-4.3296	-0.0027079	-1.4069	-0.00087995	625.429727159543	108.86	0.68909	108.83	108.52	109.21	-0.029381					65	29	3	0	0	0	0.88541	1	12084	12084		11.511	0	1	3045400	+		65262	19230	43356	43374	74094	74094					0.23617311746966152
VVRKLRIDVC	10	Unmodified	_VVRKLRIDVC_					0	0	0			REV__ENST00000561483.5_1_15:84323016-84694242:+|nuORF	REV__ENST00000561483.5_1_15:84323016-84694242:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.9153137207031	3	400.913025	1199.71725	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.06	1	113.09	112.59	113.59	0.030602								0	0	0	0.45132	1	13665	13665		20.837	3.3691	1		+		65263	20473	43357	43375	74095	74095					0.1253770457894916
VVRKQFPNVPI	11	Unmodified	_VVRKQFPNVPI_					0	0	0		ENST00000466764.5_1_X:48436119-48436305:+|nuORF	ENST00000466764.5_1_X:48436119-48436305:+|nuORF	ENST00000466764.5_1_X:48436119-48436305:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	648.393798828125	2	648.892972	1295.77139	6.1915	0.0040176	-3.4533	-0.0022408	2.7382	0.0017768	648.8905338694927	107	1.1377	107.15	106.66	107.79	0.14928					80	44	3	0	0	0	0.17318	1	13089	13089		25.574	0	1	978290			65264	12140	43358	43376	74096	74096					0.13533620002158386
VVRLAPIPKNK	11	Unmodified	_VVRLAPIPKNK_					0	0	0			REV__ENSG00000174720|ENST00000344442|LARP7	REV__ENSG00000174720|ENST00000344442|LARP7	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	412.76690673828125	3	412.271319	1233.79213	2.3096	0.00095219	2.206	0.00090948	4.5156	0.0018617	412.27213195630054	49.44	1.6749	49.443	48.884	50.559	0.0035934					55	37	2	0	0	0	0.181	1	4115	4115		9.2118	6.1858	1	99429	+		65265	22010	43359	43377	74097	74097					0.18458210381822937
VVRLKVSMAF	10	Unmodified	_VVRLKVSMAF_					0	0	0		ENSG00000083457|ENST00000263087|ITGAE	ENSG00000083457|ENST00000263087|ITGAE	ENSG00000083457|ENST00000263087|ITGAE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.352783203125	2	575.344269	1148.67399	2.6142	0.0015041	-0.15558	-8.9513E-05	2.4586	0.0014146	575.3441275619858	98.676	2.5508	98.621	98.113	100.66	-0.054825					162	58	5	0	0	0	0.86718	1	10603	10603		27.882	0	1	4409300			65266	1500	43360	43378	74098	74098					0.105595148016846
VVRLPPNTN	9	Unmodified	_VVRLPPNTN_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.2923278808594	2	505.293091	1008.57163	-0.42525	-0.00021488	-2.8055	-0.0014176	-3.2308	-0.0016325	505.29158900828264	97.072	2.1897	97.303	96.825	99.015	0.23103					138	50	4	0	0	0	0.7932	1	10081	10081		21.96	2.8564	1	1851600			65267	7987	43361	43379	74099	74099					0.06768565054403552
VVRLRVDS	8	Unmodified	_VVRLRVDS_					0	0	0			REV__nc|ENSG00000072195|Q15772-1|SPEG	REV__nc|ENSG00000072195|Q15772-1|SPEG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2889099121094	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.80706	2	12961	12632;12961		25.45	0	1	3080300	+		65268	16641	43362	43380	74100;74101	74101					0.0874858239999412
VVRPGRGA	8	Unmodified	_VVRPGRGA_					0	0	0		ENST00000582766.5_1_17:43884387-43907895:+|nuORF	ENST00000582766.5_1_17:43884387-43907895:+|nuORF	ENST00000582766.5_1_17:43884387-43907895:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.24853515625	2	406.248486	810.48242	-1.791	-0.00072759	2.2768	0.00092493	0.48577	0.00019734	406.2492919418848	111.27	0.62435	111.39	111.04	111.66	0.11118					49	21	3	0	0	0	0.85277	1	11980	11980		25.45	2.4135	1	128170			65269	14116	43363	43381	74102	74102					0.06959774885558545
VVRPKVRKLI	10	Unmodified	_VVRPKVRKLI_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3663940429688	2	604.4217	1206.82885	-0.12406	-7.4983E-05	-2.4837	-0.0015012	-2.6078	-0.0015762	604.4187349909173	104.73	0.50552	104.77	104.71	105.21	0.039856					17	11	2	0	0	0	0.37624	1	11429	11429		10.866	9.8687	1	218590			65270	8381	43364	43382	74103	74103					0.23370506998389828
VVRRKAREVS	10	Unmodified	_VVRRKAREVS_					0	0	0			REV__nc|ENSG00000128918|O94788-4|ALDH1A2	REV__nc|ENSG00000128918|O94788-4|ALDH1A2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.9149169921875	3	400.582556	1198.72584	-1.9294	-0.00077288	-2.847	-0.0011404	-4.7763	-0.0019133	400.5812185024314	112.11	1.0204	112.09	111.8	112.82	-0.019882					97	31	4	0	0	0	0.85633	1	12002	12002		21.686	0.8486	1	9176900	+		65271	18800	43365	43383	74104	74104					0.13442394539788438
VVRRRSFSI	9	Unmodified	_VVRRRSFSI_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3416748046875	2	560.340907	1118.66726	3.1454	0.0017625	-4.1604	-0.0023312	-1.015	-0.00056875	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.7932	1	13238	13238		23.042	5.6775	1	151040			65272	5511	43366	43384	74105	74105					0.11267337965318802
VVRRTASSPGR	11	Unmodified	_VVRRTASSPGR_					0	0	0			REV__ENST00000368314.5_1_6:127587778-127587985:+|nuORF	REV__ENST00000368314.5_1_6:127587778-127587985:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.3441772460938	2	593.344178	1184.6738	-0.64573	-0.00038314	1.086	0.00064436	0.44025	0.00026122	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.72106	1	11234	11234		28.081	1.0342	1	2296600	+		65273	25590	43367	43385	74106	74106					0.08885231126009785
VVRSPGGKGT	10	Unmodified	_VVRSPGGKGT_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2773132324219	2	479.277441	956.540328	-0.93682	-0.000449	0.7059	0.00033832	-0.23092	-0.00011067	479.27764511444803	82.047	3.0883	82.104	80.189	83.277	0.057808					239	73	4	0	0	0	0.82886	1	8131	8131		37.812	1.3648	1	2046100			65274	5938	43368	43386	74107	74107					0.06031992020336929
VVRSPGGKGT	10	Unmodified	_VVRSPGGKGT_					0	0	0		ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	ENSG00000164199|ENST00000405460|ADGRV1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.2776184082031	2	479.277441	956.540328	-0.77651	-0.00037216	0.64631	0.00030976	-0.1302	-6.2402E-05	479.2776508799325	84.198	7.2034	84.257	82.858	90.062	0.05925					542	167	6	0	0	0	0.86218	1	8724	8724		32.812	1.2826	1	7040000			65275	5938	43368	43386	74108	74108					0.06031992020336929
VVRSQLGKG	9	Unmodified	_VVRSQLGKG_					0	0	0			REV__ENSG00000140470|ENST00000268070|ADAMTS17	REV__ENSG00000140470|ENST00000268070|ADAMTS17	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.2864990234375	2	472.287808	942.561064	-1.7052	-0.00080534	1.7988	0.00084953	0.093579	4.4196E-05	472.28856572925633	113.32	6.698	113.27	113.24	119.94	-0.044777					309	158	2	0	0	0	0.7932	1	12801	12801		23.042	2.5607	1	3080300	+		65276	19621	43369	43387	74109	74109					0.0874858239999412
VVRSSVHARWI	11	Unmodified	_VVRSSVHARWI_					0	0	0		chr7:55952276-55953179|63|40.3|0.84|5.59|+|ENST00000443449|MRPS17,MRPS17;ENSG00000239789|ENST00000285298|MRPS17	chr7:55952276-55953179|63|40.3|0.84|5.59|+|ENST00000443449|MRPS17,MRPS17	chr7:55952276-55953179|63|40.3|0.84|5.59|+|ENST00000443449|MRPS17,MRPS17	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2568664550781	3	437.254439	1308.74149	2.1229	0.00092824	4.404	0.0019257	6.5269	0.0028539	437.2563089738452	99.067	2.7047	99.115	98.232	100.94	0.048157					189	62	4	0	0	0	0.72374	1	10640	10640		27.644	0.59661	1	798600			65277	500	43370	43388	74110	74110					0.09946681056840134
VVRSTERK	8	Unmodified	_VVRSTERK_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.79052734375	2	487.790715	973.566878	-1.4694	-0.00071678	1.0759	0.00052482	-0.39353	-0.00019196	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.88185	1	8282	8282		32.812	6.0163	1	607090	+		65278	20437;29946	43371	43389	74111	74111					0.07903680911658739
VVRTRSRVF	9	Unmodified	_VVRTRSRVF_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3404541015625	2	560.340907	1118.66726	1.387	0.00077719	-2.7531	-0.0015427	-1.3661	-0.00076547	560.3393098857354	102.2	3.4943	102.24	101.68	105.17	0.043198					353	84	6	0	0	0	0.7932	1	11432	11432		21.96	1.9631	1	81463000	+		65279	17017	43372	43390	74112	74112					0.11267337965318802
VVRTRSRVF	9	Unmodified	_VVRTRSRVF_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3399658203125	2	560.340907	1118.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.3	1	106.34	105.84	106.84	0.03688								0	0	0	0.30416	1	11637	11637		29.15	0	1		+		65280	17017	43372	43390	74113	74113					0.11267337965318802
VVRTRSRVF	9	Unmodified	_VVRTRSRVF_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.340087890625	2	560.340907	1118.66726	-1.4185	-0.00079484	0.46581	0.00026101	-0.95269	-0.00053383	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	2	12225	12225;12520		23.042	1.0826	1	4071000	+		65281	17017	43372	43390	74114;74115	74114					0.11267337965318802
VVRTRSRVF	9	Unmodified	_VVRTRSRVF_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.3388061523438	2	560.340907	1118.66726	2.2618	0.0012674	-3.4816	-0.0019509	-1.2198	-0.00068351	560.3388216371037	101.92	1.2723	102.19	101.76	103.04	0.26322					139	33	6	0	0	0	0.7932	1	12471	12471		23.042	0	1	14759000	+		65282	17017	43372	43390	74116	74116					0.11267337965318802
VVRVANAPN	9	Unmodified	_VVRVANAPN_					0	0	0		ENST00000396020.7_1_14:50043976-50044102:-|nuORF	ENST00000396020.7_1_14:50043976-50044102:-|nuORF	ENST00000396020.7_1_14:50043976-50044102:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	470.2720031738281	2	470.272158	938.529764	0.69739	0.00032796	-0.70102	-0.00032967	-0.0036337	-1.7088E-06	470.2717761018985	92.152	2.8924	92.309	91.308	94.201	0.15649					149	68	4	0	0	0	0.74721	1	9321	9321		37.159	3.6661	1	1938200			65283	11105	43373	43391	74117	74117					0.058040093658860314
VVRVSCMGEVA	11	Unmodified	_VVRVSCMGEVA_					0	0	0			REV__nc|ENSG00000099954|Q9BXF3-2|CECR2	REV__nc|ENSG00000099954|Q9BXF3-2|CECR2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.29443359375	2	575.291376	1148.5682	-0.40049	-0.0002304	1.7784	0.0010231	1.378	0.00079272	575.2939499046428	76.272	1.9971	76.84	75.707	77.704	0.56836					170	54	4	0	0	0	0.65746	1	8563	8563		37.812	0.65241	1	1396200	+		65284	29736	43374	43392	74118	74118					-0.00014189106104822713
VVRVSLVWIF	10	Unmodified	_VVRVSLVWIF_					0	0	0		nc|ENSG00000006576|Q8N3S3-4|PHTF2;nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;nc|ENSG00000006576|Q8N3S3-7|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.9183349609375	3	406.585015	1216.73321	-1.7908	-0.00072813	-0.67198	-0.00027322	-2.4628	-0.0010013	406.5846406101276	111.69	0.38136	111.8	111.59	111.97	0.11118					29	11	3	0	0	0	0.86698	2	12028	12028;12030		28.081	2.5074	1	6428000			65285	703	43375	43393	74119;74120	74119					0.1335173408749597
VVRVSLVWIF	10	Unmodified	_VVRVSLVWIF_					0	0	0		nc|ENSG00000006576|Q8N3S3-4|PHTF2;nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;nc|ENSG00000006576|Q8N3S3-7|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.5840759277344	3	406.585015	1216.73321	-1.7911	-0.00072824	-0.55827	-0.00022698	-2.3494	-0.00095523	406.5846515524058	112.19	0.31435	112.3	112.2	112.51	0.10638					30	11	3	0	0	0	0.86621	1	12101	12101		26.063	5.2262	1	4130800			65286	703	43375	43393	74121	74121					0.1335173408749597
VVRVSLVWIF	10	Unmodified	_VVRVSLVWIF_					0	0	0		nc|ENSG00000006576|Q8N3S3-4|PHTF2;nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;nc|ENSG00000006576|Q8N3S3-7|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.5835266113281	3	406.585015	1216.73321	0.73403	0.00029845	-3.1024	-0.0012614	-2.3684	-0.00096296	406.5836501066581	111.89	0.52492	111.96	111.59	112.12	0.069542					42	15	3	0	0	0	0.85834	1	12053	12053		22.58	0.018069	1	1799400			65287	703	43375	43393	74122	74122					0.1335173408749597
VVRVSLVWIF	10	Unmodified	_VVRVSLVWIF_					0	0	0		nc|ENSG00000006576|Q8N3S3-4|PHTF2;nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;nc|ENSG00000006576|Q8N3S3-7|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	406.917724609375	3	406.585015	1216.73321	0.73411	0.00029848	-3.0284	-0.0012313	-2.2943	-0.00093283	406.5836914632484	112.22	0.2012	112.29	112.11	112.31	0.066025					13	6	3	0	0	0	0.86587	1	12091	12091		29.17	3.596	1	189340			65288	703	43375	43393	74123	74123					0.1335173408749597
VVRVSLVWIF	10	Unmodified	_VVRVSLVWIF_					0	0	0		nc|ENSG00000006576|Q8N3S3-4|PHTF2;nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;nc|ENSG00000006576|Q8N3S3-7|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	406.5841369628906	3	406.585015	1216.73321	-1.927	-0.00078348	-0.54038	-0.00021971	-2.4674	-0.0010032	406.58477414221215	112.11	0.72639	112.09	111.83	112.55	-0.01989					36	23	2	0	0	0	0.85441	2	11983	11963;11983		27.047	7.7846	1	4313100			65289	703	43375	43393	74124;74125	74125					0.1335173408749597
VVRVSLVWIFF	11	Unmodified	_VVRVSLVWIFF_					0	0	0		nc|ENSG00000006576|Q8N3S3-4|PHTF2;nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;nc|ENSG00000006576|Q8N3S3-7|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	nc|ENSG00000006576|Q8N3S3-4|PHTF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	455.6084289550781	3	455.607819	1363.80163	0.46743	0.00021296	0.659	0.00030025	1.1264	0.00051321	455.6080274279011	68.257	0.91483	68.385	68.009	68.924	0.12838					61	33	2	0	0	0	0.76251	1	6118	6118		19.263	1.4295	1	170150			65290	703	43376	43394	74126	74126					0.13427978667345997
VVRYLEYED	9	Unmodified	_VVRYLEYED_					0	0	0			REV__nc|ENSG00000196218|P21817-3|RYR1	REV__nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	593.2899780273438	2	593.292953	1184.57135	0.86022	0.00051037	2.0278	0.0012031	2.8881	0.0017135	593.2941433664084	89.876	1.3249	90.327	89.776	91.101	0.45058					55	34	2	0	0	0	0.62081	1	10583	10583		45.952	5.1738	1	609410	+		65291	23105	43377	43395	74127	74127					-0.013548994561233485
VVSEETLVN	9	Unmodified	_VVSEETLVN_					0	0	0			REV__ENSG00000197405|ENST00000355085|C5AR1	REV__ENSG00000197405|ENST00000355085|C5AR1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.2598876953125	2	495.261122	988.507691	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.343	1	35.591	35.091	36.091	0.24769								0	0	0	0.28386	1	2691	2691		37.159	1.5408	1		+		65292	23226	43378	43396	74128	74128					0.012977401068042127
VVSFCLLF	8	Unmodified	_VVSFCLLF_					0	0	0			REV__nc|ENSG00000116574|Q7L0Q8-2|RHOU	REV__nc|ENSG00000116574|Q7L0Q8-2|RHOU	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.25408935546875	2	464.254057	926.493561	0.086658	4.0231E-05	-0.17606	-8.1738E-05	-0.089404	-4.1506E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.89457	1	8430	8430		37.028	0	1	1673200	+		65293	18203	43379	43397	74129	74129					0.027374161448278755
VVSFLFVF	8	Unmodified	_VVSFLFVF_					0	0	0			REV__nc|ENSG00000171105|P06213-2|INSR	REV__nc|ENSG00000171105|P06213-2|INSR	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27752685546875	2	479.275847	956.537141	-1.1288	-0.000541	4.4078	0.0021125	3.279	0.0015715	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.86791	2	7632	7632;7657		28.254	2.6802	1	1311100	+		65294	21712	43380	43398	74130;74131	74130					0.05713348913604932
VVSFLFVF	8	Unmodified	_VVSFLFVF_					0	0	0			REV__nc|ENSG00000171105|P06213-2|INSR	REV__nc|ENSG00000171105|P06213-2|INSR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.2768249511719	2	479.275847	956.537141	2.817	0.0013501	0.50061	0.00023993	3.3176	0.00159	479.2759456818491	112.87	1.6654	112.84	112.19	113.85	-0.024811					57	42	2	0	0	0	0.89457	1	12471	12471		37.028	8.7742	1	640150	+		65295	21712	43380	43398	74132	74132					0.05713348913604932
VVSFLFVF	8	Unmodified	_VVSFLFVF_					0	0	0			REV__nc|ENSG00000171105|P06213-2|INSR	REV__nc|ENSG00000171105|P06213-2|INSR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	479.2779541015625	2	479.275847	956.537141	-0.83282	-0.00039915	4.0167	0.0019251	3.1839	0.001526	479.27766568656426	84.12	6.7137	84.296	82.941	89.655	0.17561					421	157	5	0	0	0	0.86791	1	8574	8574		28.254	4.0515	1	7438100	+		65296	21712	43380	43398	74133	74133					0.05713348913604932
VVSFLFVF	8	Unmodified	_VVSFLFVF_					0	0	0			REV__nc|ENSG00000171105|P06213-2|INSR	REV__nc|ENSG00000171105|P06213-2|INSR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2778625488281	2	479.275847	956.537141	0.29447	0.00014113	3.2442	0.0015549	3.5386	0.001696	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.87276	1	9633	9633		29.842	0.69198	1	5642300	+		65297	21712	43380	43398	74134	74134					0.05713348913604932
VVSFLFVF	8	Unmodified	_VVSFLFVF_					0	0	0			REV__nc|ENSG00000171105|P06213-2|INSR	REV__nc|ENSG00000171105|P06213-2|INSR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2780456542969	2	479.275847	956.537141	2.056	0.00098538	1.7576	0.00084237	3.8135	0.0018277	479.27658358696607	97.01	0.8148	97.415	96.969	97.784	0.40498					49	19	3	0	0	0	0.87276	1	11653	11653		29.842	1.5873	1	862190	+		65298	21712	43380	43398	74135	74135					0.05713348913604932
VVSFLFVF	8	Unmodified	_VVSFLFVF_					0	0	0			REV__nc|ENSG00000171105|P06213-2|INSR	REV__nc|ENSG00000171105|P06213-2|INSR	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	479.275847	956.537141	-1.6824	-0.00080635	5.6766	0.0027206	3.9941	0.0019143	479.2788656228237	113.19	0.20975	113.16	113.01	113.22	-0.032333	0.15685	0.0040774	NaN	37.028	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	557820	+		65299	21712	43380	43398							0.05713348913604932
VVSIRRSAS	9	Unmodified	_VVSIRRSAS_					0	0	0		ENST00000377211.8_1_13:78492712-78493610:-|nuORF	ENST00000377211.8_1_13:78492712-78493610:-|nuORF	ENST00000377211.8_1_13:78492712-78493610:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	487.79083251953125	2	487.790715	973.566878	-1.0855	-0.00052952	0.66797	0.00032583	-0.41757	-0.00020369	487.79106237276693	82.461	2.3713	82.461	80.991	83.362	0					150	66	3	0	0	0	0.76764	1	7705	7705		34.173	12.47	1	309700			65300	10830	43381	43399	74136	74136					0.07903680911658739
VVSKREIQHL	10	Unmodified	_VVSKREIQHL_					0	0	0			REV__ENST00000589814.5_1_17:59471042-59476602:-|nuORF	REV__ENST00000589814.5_1_17:59471042-59476602:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.8582153320312	2	604.859129	1207.70371	0.22273	0.00013472	-1.1358	-0.00068697	-0.91302	-0.00055225	604.8583327420461	82.105	1.1205	82.531	81.753	82.873	0.42645					96	27	4	0	0	0	0.66675	2	9477	9465;9477		26.693	4.733	1	3330300	+		65301	29170	43382	43400	74137;74138	74138					0.10816170071370834
VVSPKSPH	8	Unmodified	_VVSPKSPH_					0	0	0		ENSG00000138658|ENST00000505019|ZGRF1;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-5|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;nc|ENSG00000138658|Q86YA3-4|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	ENSG00000138658|ENST00000505019|ZGRF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2948303222656	2	425.742702	849.470852	-0.10326	-4.3963E-05	-0.59759	-0.00025442	-0.70085	-0.00029838	425.74216200300145	74.722	2.5686	75.113	74.29	76.859	0.3911					118	61	4	0	0	0	0.4196	1	8487	8487		47.916	9.1095	1	1446200			65302	4314	43383	43401	74139	74139					0.040095330715644195
VVSRCCIKGRT	11	Unmodified	_VVSRCCIKGRT_					0	0	0		chr21:18262893-18265959|31|95.71|0.21|8.81|+|2|CHODL,None|1	chr21:18262893-18265959|31|95.71|0.21|8.81|+|2|CHODL,None|1	chr21:18262893-18265959|31|95.71|0.21|8.81|+|2|CHODL,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3301391601562	2	611.331367	1220.64818	0.41561	0.00025408	-3.7073	-0.0022664	-3.2916	-0.0020123	611.3290637952541	78.627	1.0378	78.573	78.292	79.329	-0.053558					59	27	3	0	0	0	0.55601	1	7838	7838		47.96	0.73184	1	333110			65303	372	43384	43402	74140	74140					0.04668297287707901
VVSRLHLARN	10	Unmodified	_VVSRLHLARN_					0	0	0		ENST00000489559.1_1_3:38175990-38178538:-|nuORF	ENST00000489559.1_1_3:38175990-38178538:-|nuORF	ENST00000489559.1_1_3:38175990-38178538:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8538818359375	2	582.851638	1163.68872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.46	1	118.43	117.93	118.93	-0.024208								0	0	0	0.45132	1	13121	13121		19.997	0	1				65304	12653	43385	43403	74141	74141					0.11342722994027099
VVSRLHLARN	10	Unmodified	_VVSRLHLARN_					0	0	0		ENST00000489559.1_1_3:38175990-38178538:-|nuORF	ENST00000489559.1_1_3:38175990-38178538:-|nuORF	ENST00000489559.1_1_3:38175990-38178538:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8553466796875	2	582.851638	1163.68872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.83	1	119.8	119.3	120.3	-0.024033								0	0	0	0.45132	1	13272	13272		16.473	0.83134	1				65305	12653	43385	43403	74142	74142					0.11342722994027099
VVSSLPPL	8	Unmodified	_VVSSLPPL_					0	0	0		ENSG00000103657|ENST00000443617|HERC1;ENST00000559886.1_1_15:64045105-64067822:-|nuORF	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2480163574219	2	406.249829	810.485105	-1.791	-0.00072759	-1.0283	-0.00041774	-2.8193	-0.0011453	406.2492919418848	111.27	0.62435	111.39	111.04	111.66	0.11118					49	21	3	0	0	0	0.81548	1	11988	11988		20.482	0	1	128170			65306	2096	43386	43404	74143	74143					0.07228185499855044
VVSSLVLPI	9	Unmodified	_VVSSLVLPI_					0	0	0			REV__ENSG00000255804|ENST00000540461|OR6J1	REV__ENSG00000255804|ENST00000540461|OR6J1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.8013000488281	2	463.799686	925.584819	-2.0271	-0.00094015	3.6042	0.0016716	1.5771	0.00073146	463.8011904430391	42.409	1.7953	42.842	41.993	43.788	0.4334					141	44	4	0	0	0	0.7932	1	3745	3745		24.203	0	1	5050800	+		65307	23902	43387	43405	74144	74144					0.11905003113804469
VVSVAASIP	9	Unmodified	_VVSVAASIP_					0	0	0			REV__ENST00000343638.9_1_17:42283916-42284555:-|nuORF	REV__ENST00000343638.9_1_17:42283916-42284555:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	421.7518005371094	2	421.752736	841.490919	-0.10002	-4.2183E-05	-2.8576	-0.0012052	-2.9576	-0.0012474	421.75148393834354	77.061	4.3703	77.013	75.737	80.107	-0.048264					249	154	2	0	0	0	0.7932	1	7610	7610		24.203	0	1	579450	+		65308	25294	43388	43406	74145	74145					0.06383284011508294
VVSYFLITRGI	11	Unmodified	_VVSYFLITRGI_					0	0	0		ENST00000593607.1_1_19:54120057-54120405:+|nuORF	ENST00000593607.1_1_19:54120057-54120405:+|nuORF	ENST00000593607.1_1_19:54120057-54120405:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3760986328125	2	634.374081	1266.73361	6.6613	0.0042258	-2.0557	-0.0013041	4.6056	0.0029217	634.3726345938362	109.86	1.9527	109.93	109.36	111.31	0.068001					215	83	3	0	0	0	0.70737	1	13366	13366		30.318	2.2362	1	7041100			65309	14309	43389	43407	74146	74146					0.11091109016683731
VVSYILLF	8	Unmodified	_VVSYILLF_					0	0	0			REV__ENST00000548209.5_1_12:51447626-51449969:+|nuORF	REV__ENST00000548209.5_1_12:51447626-51449969:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.9585266113281	2	477.288954	952.563355	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.26	1	116.32	115.82	116.82	0.059448								0	0	0	0.30004	1	12349	12349		21.702	0	1		+		65310	28567	43390	43408	74147	74147					0.08517618085102185
VVSYKLRPFV	10	Unmodified	_VVSYKLRPFV_					0	0	0			REV__ENST00000502245.1_1_4:36258154-36274888:+|nuORF	REV__ENST00000502245.1_1_4:36258154-36274888:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	604.3666381835938	2	604.363516	1206.71248	3.6458	0.0022034	1.558	0.00094162	5.2038	0.003145	604.3643585001348	104.29	3.6811	104.51	104.02	107.7	0.22681					292	116	6	0	0	0	0.85259	2	12937	12817;12937		20.947	8.5522	1	5883900	+		65311	27814	43391	43409	74148;74149	74149					0.11739143707836774
VVSYLSGSKL	10	Unmodified	_VVSYLSGSKL_					0	0	0			REV__ENSG00000127329|ENST00000334414|PTPRB	REV__ENSG00000127329|ENST00000334414|PTPRB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	527.3054809570312	2	526.802957	1051.59136	-0.10039	-5.2887E-05	3.5057	0.0018468	3.4053	0.0017939	526.807278834427	99.072	1.5943	99.295	98.744	100.34	0.22263					122	37	5	0	0	0	0.8651	1	10279	10279		25.574	1.3713	1	2555900	+		65312	18728	43392	43410	74150	74150					0.06762896274540253
VVTASDISKR	10	Unmodified	_VVTASDISKR_					0	0	0		nc|ENSG00000118004|Q9BWP8-9|COLEC11	nc|ENSG00000118004|Q9BWP8-9|COLEC11	nc|ENSG00000118004|Q9BWP8-9|COLEC11	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.3265991210938	2	538.308938	1074.60332	-0.5347	-0.00028783	1.368	0.00073641	0.83331	0.00044858	538.3098755379805	101.97	0.33543	101.97	101.69	102.02	0					12	7	2	0	0	0	0.37624	1	10363	10363		33.922	7.8582	1	43439			65313	14865	43393	43411	74151	74151					0.06900513017717458
VVTIHRIVDR	10	Unmodified	_VVTIHRIVDR_					0	0	0			REV__ENSG00000048405|ENST00000265827|ZNF800	REV__ENSG00000048405|ENST00000265827|ZNF800	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3687744140625	2	604.367121	1206.71969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.85	1	113.83	113.33	114.33	-0.024452								0	0	0	0.45132	1	12603	12603		17.365	1.7232	1		+		65314	16365	43394	43412	74152	74152					0.12459876308253115
VVTIITSQSLR	11	Unmodified	_VVTIITSQSLR_					0	0	0		ENSG00000181903|ENST00000314259|OR4C6	ENSG00000181903|ENST00000314259|OR4C6	ENSG00000181903|ENST00000314259|OR4C6	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.2478332519531	3	406.246839	1215.71869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.28	1	116.25	115.75	116.75	-0.02433								0	0	0	0.56276	1	12873	12873		17.167	1.16	1				65315	7413	43395	43413	74153	74153					0.1194561714869451
VVTKKASA	8	Unmodified	_VVTKKASA_					0	0	0			REV__nc|ENSG00000159023|P11171-6|EPB41	REV__nc|ENSG00000159023|P11171-6|EPB41	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	402.25244140625	2	402.252903	802.491253	-1.9383	-0.0007797	0.96529	0.00038829	-0.97305	-0.00039141	402.2532360311715	19.929	0.38907	19.973	19.802	20.191	0.043747					30	18	2	0	0	0	0.79929	1	458	458		18.324	0	1	127490	+		65316	20632	43396	43414	74154	74154					0.0821070373136763
VVTKKGLMA	9	Unmodified	_VVTKKGLMA_					0	0	0			REV__ENSG00000127337|ENST00000247843|YEATS4	REV__ENSG00000127337|ENST00000247843|YEATS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.7932434082031	2	473.791338	945.568123	1.2996	0.00061576	2.9961	0.0014195	4.2958	0.0020353	473.7925489701058	88.987	2.0839	88.914	88.554	90.638	-0.07238					97	48	4	0	0	0	0.69914	1	9290	9290		40.573	8.6178	1	495980	+		65317	18729	43397	43415	74155	74155					0.09316178956214571
VVTKKGLMA	9	Unmodified	_VVTKKGLMA_					0	0	0			REV__ENSG00000127337|ENST00000247843|YEATS4	REV__ENSG00000127337|ENST00000247843|YEATS4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.7930603027344	2	473.791338	945.568123	-0.18199	-8.6227E-05	4.3971	0.0020833	4.2151	0.0019971	473.79325426330604	88.888	1.49	88.938	88.433	89.923	0.050407					84	34	4	0	0	0	0.77546	1	9147	9147		31.955	3.7006	1	503710	+		65318	18729	43397	43415	74156	74156					0.09316178956214571
VVTLVFAM	8	Unmodified	_VVTLVFAM_					0	0	0			REV__ENST00000535177.1_1_11:61121022-61124194:-|nuORF	REV__ENST00000535177.1_1_11:61121022-61124194:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	440.2568359375	2	440.254057	878.493561	0.48837	0.00021501	2.7732	0.0012209	3.2616	0.0014359	440.2553200536456	72.771	0.86505	72.902	72.395	73.26	0.13064					39	28	2	0	0	0	0.87276	1	6715	6715		29.842	3.0454	1	97421	+		65319	20798	43398	43416	74157	74157					0.049454161448238665
VVTPEKPIPI	10	Unmodified	_VVTPEKPIPI_					0	0	0		ENSG00000160007|ENST00000672722|ARHGAP35;ENST00000595822.1_1_19:47440583-47491508:+|nuORF	ENSG00000160007|ENST00000672722|ARHGAP35	ENSG00000160007|ENST00000672722|ARHGAP35	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.8399047851562	2	546.8368	1091.65905	3.386	0.0018516	1.8298	0.0010006	5.2158	0.0028522	546.8379771318001	101.02	3.777	100.97	100.36	104.13	-0.052116					284	90	6	0	0	0	0.64457	2	11050	11026;11050		47.657	5.2612	1	39176000			65320	5552	43399	43417	74158;74159	74159					0.11688346205323796
VVTPLIPTVQP	11	Unmodified	_VVTPLIPTVQP_					0	0	0		ENST00000554913.5_1_14:104163972-104164347:-|nuORF	ENST00000554913.5_1_14:104163972-104164347:-|nuORF	ENST00000554913.5_1_14:104163972-104164347:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	582.3524780273438	2	582.355357	1162.69616	0.75692	0.00044079	-3.4476	-0.0020077	-2.6906	-0.0015669	582.3532376593708	103.08	2.584	103.3	103	105.58	0.22556					189	68	3	0	0	0	0.73893	1	12725	12725		24.519	0	1	7736200			65321	13727	43400	43418	74160	74160					0.1213201775105972
VVTPLNLS	8	Unmodified	_VVTPLNLS_					0	0	0		ENST00000471212.5_1_9:35684790-35689844:-|nuORF	ENST00000471212.5_1_9:35684790-35689844:-|nuORF	ENST00000471212.5_1_9:35684790-35689844:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.75146484375	2	421.752736	841.490919	-1.7818	-0.0007515	-1.2969	-0.00054696	-3.0787	-0.0012985	421.7522177518738	76.828	1.8707	76.953	75.249	77.12	0.12485					132	61	3	0	0	0	0.884	1	7142	7142		33.516	9.3128	1	487030			65322	12236	43401	43419	74161	74161					0.06383284011508294
VVTPPLERIL	10	Unmodified	_VVTPPLERIL_					0	0	0		ENST00000441224.5_1_2:201981610-201994530:+|nuORF	ENST00000441224.5_1_2:201981610-201994530:+|nuORF	ENST00000441224.5_1_2:201981610-201994530:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.853759765625	2	568.855524	1135.69649	-0.36185	-0.00020584	-3.5989	-0.0020473	-3.9608	-0.0022531	568.8533988874724	102.49	4.912	102.49	102.02	106.93	0					372	119	6	0	0	0	0.5766	2	10590	10440;10590		51.335	9.9088	1	34546000			65323	11780	43402	43420	74162;74163	74163					0.1340743747093711
VVTPRRAT	8	Unmodified	_VVTPRRAT_					0	0	0			REV__ENST00000591365.1_1_17:43298722-43299568:-|nuORF	REV__ENST00000591365.1_1_17:43298722-43299568:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.27447509765625	2	450.274701	898.534849	0.68453	0.00030823	-1.4101	-0.00063492	-0.72554	-0.00032669	450.274017823277	92.966	2.5762	93.125	92.369	94.945	0.15875					259	61	7	0	0	0	0.84341	1	9542	9542		24.203	0	1	41438000	+		65324	29194	43403	43421	74164	74164					0.08152313228504227
VVTPVMVVGT	10	Unmodified	_VVTPVMVVGT_					0	0	0		nc|ENSG00000135902|Q07001-2|CHRND;ENSG00000135902|ENST00000258385|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.290283203125	2	501.288628	1000.5627	0.67941	0.00034058	2.8988	0.0014531	3.5782	0.0017937	501.28998535478297	86.4	6.2238	86.549	85.037	91.261	0.14902					539	147	6	0	0	0	0.86589	1	8414	8414		29.15	4.6304	1	9566900			65325	4060	43404	43422	74165	74165					0.06244455373735036
VVTPVMVVGT	10	Unmodified	_VVTPVMVVGT_					0	0	0		nc|ENSG00000135902|Q07001-2|CHRND;ENSG00000135902|ENST00000258385|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	nc|ENSG00000135902|Q07001-2|CHRND	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2904968261719	2	501.288628	1000.5627	-0.28392	-0.00014233	3.869	0.0019395	3.5851	0.0017972	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.85934	1	10190	10190		35.618	2.8059	1	9038000			65326	4060	43404	43422	74166	74166					0.06244455373735036
VVTRLFLSP	9	Unmodified	_VVTRLFLSP_					0	0	0			REV__ENST00000594950.5_1_19:58865159-58865438:+|nuORF	REV__ENST00000594950.5_1_19:58865159-58865438:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.314453125	2	516.316035	1030.61752	-0.047037	-2.4286E-05	-3.4337	-0.0017729	-3.4807	-0.0017972	516.3142012916925	102.4	1.3625	102.42	101.73	103.09	0.01989					76	32	3	0	0	0	0.76764	1	10930	10930		34.173	3.6689	1	772400	+		65327	29241	43405	43423	74167	74167					0.10343210236646883
VVTRRTKD	8	Unmodified	_VVTRRTKD_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.79052734375	2	487.790715	973.566878	-0.085473	-4.1693E-05	-0.089202	-4.3512E-05	-0.17467	-8.5205E-05	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.80706	1	8278	8278		19.36	0	1	1889700	+		65328	16824	43406	43424	74168	74168					0.07903680911658739
VVTSRAAPP	9	Unmodified	_VVTSRAAPP_					0	0	0		nc|ENSG00000128487|Q5M775-5|SPECC1;nc|ENSG00000128487|Q5M775-3|SPECC1;nc|ENSG00000128487|Q5M775-2|SPECC1;nc|ENSG00000128487|Q5M775-4|SPECC1;ENSG00000128487|ENST00000395527|SPECC1;ENST00000472876.5_1_17:19912695-20140191:+|nuORF	nc|ENSG00000128487|Q5M775-5|SPECC1	nc|ENSG00000128487|Q5M775-5|SPECC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.2595520019531	2	449.261259	896.507966	-0.14446	-6.49E-05	-1.6357	-0.00073486	-1.7802	-0.00079976	449.2602580863219	68.899	0.74516	68.925	68.628	69.373	0.026367					56	32	3	0	0	0	0.7932	1	6515	6515		21.96	1.013	1	200640			65329	3542	43407	43425	74169	74169					0.055572046173210765
VVTTDGTPL	9	Unmodified	_VVTTDGTPL_					0	0	0		nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.7449645996094	2	451.745108	901.475663	-0.42544	-0.00019219	0.58191	0.00026287	0.15647	7.0685E-05	451.7452985454062	33.515	0.67748	33.459	33.146	33.823	-0.056385					47	15	4	0	0	0	0.17071	1	2037	2037		79.939	5.9645	1	315680			65330	14976	43408	43426	74170	74170					0.020983724236884882
VVTTTLSPL	9	Unmodified	_VVTTTLSPL_					0	0	0			REV__ENSG00000168916|ENST00000513986|ZNF608	REV__ENSG00000168916|ENST00000513986|ZNF608	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7774963378906	2	465.778951	929.543348	-1.2002	-0.00055902	-1.7507	-0.00081543	-2.9509	-0.0013744	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.78058	1	7674	7674		30.504	0	1	683640	+		65331	21532	43409	43427	74171	74171					0.07575822354476713
VVTVNHILK	9	Unmodified	_VVTVNHILK_					0	0	0		ENST00000528352.1_1_1:67241210-67243134:+|nuORF;ENSG00000152760|ENST00000282670|DYNLT5	ENST00000528352.1_1_1:67241210-67243134:+|nuORF	ENST00000528352.1_1_1:67241210-67243134:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.8202209472656	2	511.821484	1021.62842	0.67381	0.00034487	-2.1469	-0.0010988	-1.4731	-0.00075398	511.82055098221025	15.806	0.18293	15.317	15.204	15.387	-0.48917					7	4	2	0	0	0	0.77546	1	54	54		31.955	2.8053	1	73227			65332	5197	43410	43428	74172	74172					0.11846612610941065
VVTYKRKLI	9	Unmodified	_VVTYKRKLI_					0	0	0			REV__L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|10|1|sense	REV__L1MB7_dup1945|chr2:26113582-26114608:+|1.394173303177176|0.2937903993333884|2.25|63.0|10|1|sense	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.34033203125	2	560.366059	1118.71756	-1.1226	-0.00062907	-2.787	-0.0015618	-3.9096	-0.0021908	560.364305256107	102.64	0.33349	102.65	102.59	102.92	0.0082016					14	7	2	0	0	0	0.20789	1	11010	11010		21.96	2.5999	1	373380	+		65333	29517	43411	43429	74173	74173					0.1629544757045096
VVVAVAEVP	9	Unmodified	_VVVAVAEVP_					0	0	0		ENST00000396368.7_1_16:15729958-15730024:-|nuORF	ENST00000396368.7_1_16:15729958-15730024:-|nuORF	ENST00000396368.7_1_16:15729958-15730024:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.76812744140625	2	441.768386	881.522219	2.7351	0.0012083	-2.9605	-0.0013079	-0.22539	-9.957E-05	441.76685786355085	107.36	1.6234	107.32	106.14	107.77	-0.034134					55	37	2	0	0	0	0.76996	1	11910	11910		33.516	1.5607	1	1711100			65334	11116	43412	43430	74174	74174					0.07671857045613706
VVVAVLMKH	9	Unmodified	_VVVAVLMKH_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H;nc|ENSG00000100346|Q9P0X4-2|CACNA1I;ENSG00000100346|ENST00000402142|CACNA1I;nc|ENSG00000100346|Q9P0X4-3|CACNA1I;nc|ENSG00000100346|Q9P0X4-4|CACNA1I	nc|ENSG00000196557|O95180-2|CACNA1H;nc|ENSG00000100346|Q9P0X4-2|CACNA1I	nc|ENSG00000100346|Q9P0X4-2|CACNA1I	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.3055725097656	2	498.307155	994.599758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.621	1	52.661	52.161	53.161	0.040592								0	0	0	0.33301	1	4256	4256		19.36	1.995	1				65335	8074;1830	43413	43431	74175	74175					0.1022417171016059
VVVDDLLPI	9	Unmodified	_VVVDDLLPI_					0	0	0		ENST00000527897.1_1_11:64953408-64953522:+|nuORF;ENSG00000014216|ENST00000279247|CAPN1	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7960205078125	2	491.794601	981.574648	-0.71044	-0.00034939	3.0101	0.0014803	2.2996	0.001131	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.7932	1	4052	4052		24.203	1.1603	1	571510			65336	815	43414	43432	74176	74176					0.08312395388577443
VVVDDLLPI	9	Unmodified	_VVVDDLLPI_					0	0	0		ENST00000527897.1_1_11:64953408-64953522:+|nuORF;ENSG00000014216|ENST00000279247|CAPN1	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7962646484375	2	491.794601	981.574648	0.30701	0.00015099	1.9707	0.0009692	2.2778	0.0011202	491.7954417081586	46.466	1.9794	46.504	45.811	47.79	0.038185					178	58	4	0	0	0	0.7932	1	3488	3488		26.796	0	1	3201400			65337	815	43414	43432	74177	74177					0.08312395388577443
VVVDDLLPI	9	Unmodified	_VVVDDLLPI_					0	0	0		ENST00000527897.1_1_11:64953408-64953522:+|nuORF;ENSG00000014216|ENST00000279247|CAPN1	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957458496094	2	491.794601	981.574648	0.32756	0.00016109	1.929	0.00094865	2.2565	0.0011097	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.7932	2	3833	3833;3867		25.45	1.2474	1	1346800			65338	815	43414	43432	74178;74179	74178					0.08312395388577443
VVVDDLLPI	9	Unmodified	_VVVDDLLPI_					0	0	0		ENST00000527897.1_1_11:64953408-64953522:+|nuORF;ENSG00000014216|ENST00000279247|CAPN1	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79595947265625	2	491.794601	981.574648	-0.17405	-8.5598E-05	2.4406	0.0012003	2.2666	0.0011147	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.7932	1	3543	3543		26.796	2.5934	1	2994900			65339	815	43414	43432	74180	74180					0.08312395388577443
VVVDDLLPI	9	Unmodified	_VVVDDLLPI_					0	0	0		ENST00000527897.1_1_11:64953408-64953522:+|nuORF;ENSG00000014216|ENST00000279247|CAPN1	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7958679199219	2	491.794601	981.574648	-1.2395	-0.00060959	2.7769	0.0013657	1.5374	0.00075606	491.7958275421146	44.647	1.7443	45.492	44.612	46.357	0.84437					115	42	4	0	0	0	0.7932	1	4136	4136		26.796	0	1	6753400			65340	815	43414	43432	74181	74181					0.08312395388577443
VVVDDLLPI	9	Unmodified	_VVVDDLLPI_					0	0	0		ENST00000527897.1_1_11:64953408-64953522:+|nuORF;ENSG00000014216|ENST00000279247|CAPN1	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	ENST00000527897.1_1_11:64953408-64953522:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7962646484375	2	491.794601	981.574648	-0.91317	-0.00044909	3.0617	0.0015057	2.1485	0.0010566	491.79595933805444	45.694	2.2667	46.589	46.327	48.594	0.89542					151	55	4	0	0	0	0.76996	2	4390	4378;4390		33.516	0	1	3110500			65341	815	43414	43432	74182;74183	74183					0.08312395388577443
VVVDFLLPTGV	11	Unmodified	_VVVDFLLPTGV_					0	0	0		ENSG00000171608|ENST00000377346|PIK3CD;nc|ENSG00000171608|O00329-2|PIK3CD	ENSG00000171608|ENST00000377346|PIK3CD	ENSG00000171608|ENST00000377346|PIK3CD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.84375	2	579.842082	1157.66961	0.46014	0.00026681	2.9597	0.0017162	3.4198	0.001983	579.8436677237017	102.22	1.1397	102.27	101.85	102.99	0.043198					70	27	3	0	0	0	0.7342	1	11055	11055		25.574	5.5773	1	1168900			65342	6687	43415	43433	74184	74184					0.09708328859733228
VVVDFVGLAI	10	Unmodified	_VVVDFVGLAI_					0	0	0			REV__nc|ENSG00000067369|Q12888|TP53BP1	REV__nc|ENSG00000067369|Q12888|TP53BP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3139038085938	2	516.310418	1030.60628	3.0984	0.0015997	4.0844	0.0021088	7.1828	0.0037085	516.3124899317548	102.33	1.1091	102.29	101.92	103.03	-0.047005					68	26	3	0	0	0	0.86452	1	11215	11215		30.504	1.3541	1	756390	+		65343	16542	43416	43434	74185	74185					0.09220388142512093
VVVEALAII	9	Unmodified	_VVVEALAII_					0	0	0		ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.80084228515625	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	2	2902	2902;2919		24.203	1.1603	1	489490			65344	12801	43417	43435	74186;74187	74186					0.11905003113804469
VVVEALAII	9	Unmodified	_VVVEALAII_					0	0	0		ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.79998779296875	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	2	3089	3089;3228		24.203	0	1	890090			65345	12801	43417	43435	74188;74189	74188					0.11905003113804469
VVVEALAII	9	Unmodified	_VVVEALAII_					0	0	0		ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.801513671875	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.7932	1	3466	3466		25.45	0	1	279560			65346	12801	43417	43435	74190	74190					0.11905003113804469
VVVEALAII	9	Unmodified	_VVVEALAII_					0	0	0		ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.79986572265625	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	2	3465	3465;3631		18.324	0.95945	1	1294000			65347	12801	43417	43435	74191;74192	74191					0.11905003113804469
VVVEALAII	9	Unmodified	_VVVEALAII_					0	0	0		ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.80023193359375	2	463.799686	925.584819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.205	1	46.176	45.676	46.676	-0.028782								0	0	0	0.31472	1	3784	3784		25.45	8.0852	1				65348	12801	43417	43435	74193	74193					0.11905003113804469
VVVEALAII	9	Unmodified	_VVVEALAII_					0	0	0		ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	ENST00000497343.5_1_3:160473906-160474320:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.80084228515625	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3152	3152		24.203	0	1	942760			65349	12801	43417	43435	74194	74194					0.11905003113804469
VVVFIPSRA	9	Unmodified	_VVVFIPSRA_					0	0	0		ENST00000584314.5_1_17:79849654-79849729:+|nuORF;ENST00000579978.5_1_17:79849654-79852357:+|nuORF;ENST00000578550.5_1_17:79849654-79851015:+|nuORF;ENST00000574924.6_1_17:79849654-79851489:+|nuORF	ENST00000584314.5_1_17:79849654-79849729:+|nuORF	ENST00000584314.5_1_17:79849654-79849729:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	494.3010559082031	2	494.302927	986.591301	-1.6335	-0.00080746	-2.6847	-0.001327	-4.3182	-0.0021345	494.30150238478427	100.99	1.3749	101.14	100.57	101.95	0.15505					78	33	3	0	0	0	0.76255	1	10484	10484		35.618	1.4457	1	773220			65350	14039	43418	43436	74195	74195					0.09746941065179726
VVVFLWDL	8	Unmodified	_VVVFLWDL_					0	0	0			REV__nc|ENSG00000105699|Q86X29-3|LSR	REV__nc|ENSG00000105699|Q86X29-3|LSR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	495.7843322753906	2	495.786579	989.558604	-0.050399	-2.4987E-05	-4.2196	-0.002092	-4.27	-0.002117	495.78446455271546	56.959	0.52929	56.947	56.744	57.273	-0.012203					26	15	2	0	0	0	0.92973	1	5129	5129		50.025	4.0523	1	174970	+		65351	29760	43419	43437	74196	74196					0.0634073394232928
VVVFLWDL	8	Unmodified	_VVVFLWDL_					0	0	0			REV__nc|ENSG00000105699|Q86X29-3|LSR	REV__nc|ENSG00000105699|Q86X29-3|LSR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	495.78326416015625	2	495.786579	989.558604	-0.16032	-7.9484E-05	-3.9824	-0.0019744	-4.1428	-0.0020539	495.7845305067305	56.942	0.5784	56.914	56.711	57.289	-0.028664					28	16	2	0	0	0	0.84634	1	5221	5221		60.294	8.9585	1	206710	+		65352	29760	43419	43437	74197	74197					0.0634073394232928
VVVFLWDL	8	Unmodified	_VVVFLWDL_					0	0	0			REV__nc|ENSG00000105699|Q86X29-3|LSR	REV__nc|ENSG00000105699|Q86X29-3|LSR	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	495.784423828125	2	495.786579	989.558604	-2.0028	-0.00099297	-2.0018	-0.00099248	-4.0046	-0.0019855	495.78554869215685	56.91	0.43426	56.943	56.729	57.163	0.033184					21	12	2	0	0	0	0.884	1	5155	5155		33.516	3.1979	1	254500	+		65353	29760	43419	43437	74198	74198					0.0634073394232928
VVVFVNKNL	9	Unmodified	_VVVFVNKNL_					0	0	0			REV__chr16:18784853-18788063|23|64.17|0.23|8.11|-|0|None,RPS15A|1	REV__chr16:18784853-18788063|23|64.17|0.23|8.11|-|0|None,RPS15A|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.3140869140625	2	516.316035	1030.61752	-1.5619	-0.00080641	-2.3208	-0.0011983	-3.8826	-0.0020047	516.3147230126376	113.32	6.698	113.27	113.24	119.94	-0.044777					373	158	4	0	0	0	0.7932	1	12178	12178		25.45	2.4077	1	4038100	+		65354	15627	43420	43438	74199	74199					0.10343210236646883
VVVHVCGL	8	Unmodified	_VVVHVCGL_					0	0	0		nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	nc|ENSG00000148337|Q9ULV3-5|CIZ1	nc|ENSG00000148337|Q9ULV3-5|CIZ1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.23846435546875	2	413.236199	824.457844	0.89928	0.00037161	3.9088	0.0016153	4.8081	0.0019869	413.23775271826133	77.246	5.6199	77.651	75.794	81.414	0.40531					207	140	2	0	0	0	0.84567	1	8615	8615		24.504	0.30126	1	1083000			65355	4951	43421	43439	74200	74200					0.03859378687820936
VVVISVPSL	9	Unmodified	_VVVISVPSL_					0	0	0			REV__ENST00000373218.4_1_10:72182472-72182562:+|nuORF	REV__ENST00000373218.4_1_10:72182472-72182562:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	457.26397705078125	2	456.791861	911.569169	0.62766	0.00028671	-3.4212	-0.0015628	-2.7935	-0.0012761	456.7920875216028	83.59	0.21913	83.52	83.367	83.586	-0.069313					6	4	2	0	0	0	0.20789	1	8512	8512		30.504	5.0535	1	16866	+		65356	25753	43422	43440	74201	74201					0.10984716596760791
VVVIVITQLV	10	Unmodified	_VVVIVITQLV_					0	0	0			REV__ENST00000481195.5_1_5:133534786-133534852:-|nuORF	REV__ENST00000481195.5_1_5:133534786-133534852:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.8634033203125	2	541.862818	1081.71108	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.16	1	113.09	112.59	113.59	-0.067215								0	0	0	0.45132	1	12284	12284		12.207	0	1		+		65357	27434	43423	43441	74202	74202					0.17349509619089076
VVVKKLHAC	9	Unmodified	_VVVKKLHAC_					0	0	0		chr6:132817061-132817450|32|31.91|0.25|7.02|+|0|RPS12,None|1	chr6:132817061-132817450|32|31.91|0.25|7.02|+|0|RPS12,None|1	chr6:132817061-132817450|32|31.91|0.25|7.02|+|0|RPS12,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	498.80413818359375	2	498.80478	995.595007	-0.34217	-0.00017068	-1.8322	-0.00091391	-2.1744	-0.0010846	498.8037095523259	51.958	1.9059	51.874	51.388	53.294	-0.084538					158	58	4	0	0	0	0.77546	1	4124	4124		31.955	0	1	2538600			65358	466	43424	43442	74203	74203					0.09703287567367624
VVVKKVSKQH	10	Unmodified	_VVVKKVSKQH_					0	0	0		nc|ENSG00000146453|Q8NA58|PNLDC1;ENSG00000146453|ENST00000392167|PNLDC1	nc|ENSG00000146453|Q8NA58|PNLDC1	nc|ENSG00000146453|Q8NA58|PNLDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	576.3674926757812	2	576.36659	1150.71863	0.52419	0.00030213	3.55	0.0020461	4.0742	0.0023482	576.3685191522666	42.057	1.1231	42.062	41.744	42.867	0.0043983					50	31	2	0	0	0	0.86589	1	2838	2838		29.15	2.4566	1	165800			65359	4847	43425	43443	74204	74204					0.14929661939368088
VVVKKVSKQH	10	Unmodified	_VVVKKVSKQH_					0	0	0		nc|ENSG00000146453|Q8NA58|PNLDC1;ENSG00000146453|ENST00000392167|PNLDC1	nc|ENSG00000146453|Q8NA58|PNLDC1	nc|ENSG00000146453|Q8NA58|PNLDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	576.3689575195312	2	576.36659	1150.71863	0.4156	0.00023954	4.1918	0.002416	4.6074	0.0026556	576.3688772331659	49.515	1.7464	49.558	48.71	50.457	0.04224					101	42	3	0	0	0	0.85934	1	3827	3827		35.618	5.1146	1	371290			65360	4847	43425	43443	74205	74205					0.14929661939368088
VVVLFNPRKH	10	Unmodified	_VVVLFNPRKH_					0	0	0		nc|ENSG00000137802|O60336-2|MAPKBP1;nc|ENSG00000137802|O60336-3|MAPKBP1;ENSG00000137802|ENST00000457542|MAPKBP1;nc|ENSG00000137802|O60336|MAPKBP1;ENST00000515164.1_1_15:42103000-42104860:+|nuORF;nc|ENSG00000137802|O60336-5|MAPKBP1;ENST00000502292.5_1_15:42067473-42104860:+|nuORF;ENST00000507147.1_1_15:42103000-42103505:+|nuORF	nc|ENSG00000137802|O60336-2|MAPKBP1	nc|ENSG00000137802|O60336-2|MAPKBP1	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.8668212890625	2	604.866757	1207.71896	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.17	1	114.2	113.7	114.7	0.026466								0	0	0	0.45132	1	12494	12494		7.6903	0.49693	1				65361	4235	43426	43444	74206	74206					0.12341081659201336
VVVLLMWA	8	Unmodified	_VVVLLMWA_					0	0	0		ENST00000491414.5_1_2:27715265-27717055:-|nuORF;ENSG00000115226|ENST00000264703|FNDC4	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	ENST00000491414.5_1_2:27715265-27717055:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7774963378906	2	465.777699	929.540846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.455	1	79.398	78.898	79.898	-0.056503								0	0	0	0.3048	1	7953	7953		43.626	0	1				65362	2820	43427	43445	74207	74207					0.07325695415806877
VVVLLNMLIAM	11	Unmodified	_VVVLLNMLIAM_					0	0	0		nc|ENSG00000138741|Q13507-3|TRPC3;ENSG00000138741|ENST00000379645|TRPC3;nc|ENSG00000069018|Q9HCX4-2|TRPC7;nc|ENSG00000069018|Q9HCX4-3|TRPC7;ENSG00000069018|ENST00000513104|TRPC7	nc|ENSG00000138741|Q13507-3|TRPC3	nc|ENSG00000138741|Q13507-3|TRPC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.2489929199219	3	405.911634	1214.71307	2.9027	0.0011782	3.1228	0.0012676	6.0255	0.0024458	406.2472018066384	19.72	0.68778	19.65	19.255	19.943	-0.070013					36	27	2	0	0	0	0.73621	1	458	458		25.126	4.2888	1	30196			65363	4324	43428	43446	74208	74208					0.11430479041041508
VVVLTEGTL	9	Unmodified	_VVVLTEGTL_					0	0	0			REV__ENSG00000086570|ENST00000261800|FAT2	REV__ENSG00000086570|ENST00000261800|FAT2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77740478515625	2	465.778951	929.543348	-1.2002	-0.00055902	-1.7507	-0.00081543	-2.9509	-0.0013744	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.74721	2	7779	7662;7779		37.159	1.4512	1	683640	+		65364	16912	43429	43447	74209;74210	74210					0.07575822354476713
VVVLTLEAS	9	Unmodified	_VVVLTLEAS_					0	0	0		ENSG00000169221|ENST00000409939|TBC1D10B	ENSG00000169221|ENST00000409939|TBC1D10B	ENSG00000169221|ENST00000409939|TBC1D10B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.77752685546875	2	465.778951	929.543348	-0.087401	-4.0709E-05	-2.8971	-0.0013494	-2.9845	-0.0013901	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.72402	1	8227	8227		38.806	5.3132	1	1330000			65365	6477	43430	43448	74211	74211					0.07575822354476713
VVVLTLEAS	9	Unmodified	_VVVLTLEAS_					0	0	0		ENSG00000169221|ENST00000409939|TBC1D10B	ENSG00000169221|ENST00000409939|TBC1D10B	ENSG00000169221|ENST00000409939|TBC1D10B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.7774963378906	2	465.778951	929.543348	0.5788	0.00026959	-3.4798	-0.0016208	-2.901	-0.0013512	465.7772339876345	79.736	2.2271	79.877	78.229	80.457	0.14118					182	79	4	0	0	0	0.64922	1	7512	7512		44.117	0.49075	1	344270			65366	6477	43430	43448	74212	74212					0.07575822354476713
VVVLTSLPV	9	Unmodified	_VVVLTSLPV_					0	0	0		nc|ENSG00000184307|Q8IYP9|ZDHHC23;ENSG00000184307|ENST00000638807|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.8003234863281	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.77546	1	3662	3662		31.955	7.7521	1	1294000			65367	7599	43431	43449	74213	74213					0.11905003113815837
VVVLTSLPV	9	Unmodified	_VVVLTSLPV_					0	0	0		nc|ENSG00000184307|Q8IYP9|ZDHHC23;ENSG00000184307|ENST00000638807|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.80023193359375	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3305	3305		19.36	1.995	1	1516700			65368	7599	43431	43449	74214	74214					0.11905003113815837
VVVLTSLPV	9	Unmodified	_VVVLTSLPV_					0	0	0		nc|ENSG00000184307|Q8IYP9|ZDHHC23;ENSG00000184307|ENST00000638807|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8004455566406	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.7932	1	2928	2928		18.324	0	1	1091400			65369	7599	43431	43449	74215	74215					0.11905003113815837
VVVLVGAFR	9	Unmodified	_VVVLVGAFR_					0	0	0		ENST00000296215.7_2_1:38003034-38003172:-|nuORF	ENST00000296215.7_2_1:38003034-38003172:-|nuORF	ENST00000296215.7_2_1:38003034-38003172:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	480.30523681640625	2	480.30547	958.596387	-0.39203	-0.00018829	-3.8896	-0.0018682	-4.2816	-0.0020565	480.30352226845673	17.016	0.30765	16.406	16.259	16.567	-0.6107					10	6	2	0	0	0	0.77546	1	215	215		31.955	2.8053	1	130220			65370	9729	43432	43450	74216	74216					0.11543244927804608
VVVLVGAFR	9	Unmodified	_VVVLVGAFR_					0	0	0		ENST00000296215.7_2_1:38003034-38003172:-|nuORF	ENST00000296215.7_2_1:38003034-38003172:-|nuORF	ENST00000296215.7_2_1:38003034-38003172:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	480.30547	958.596387	1.0515	0.00050504	-4.9402	-0.0023728	-3.8887	-0.0018677	480.3030443897811	16.992	0.29821	16.509	16.373	16.672	-0.48256	0.051892	-0.00052474	NaN	31.955	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132750			65371	9729	43432	43450							0.11543244927804608
VVVNEGDTL	9	Unmodified	_VVVNEGDTL_					0	0	0			REV__nc|ENSG00000180316|Q8N8W4-2|PNPLA1	REV__nc|ENSG00000180316|Q8N8W4-2|PNPLA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	473.2482604980469	2	473.248015	944.481476	0.34188	0.00016179	-0.18615	-8.8093E-05	0.15574	7.3701E-05	473.24782054202086	28.883	1.4946	28.914	28.31	29.804	0.030945					99	51	4	0	0	0	0.31972	1	1407	1407		63.306	4.5243	1	514570	+		65372	22388	43433	43451	74217	74217					0.00701470935348425
VVVNEGDTL	9	Unmodified	_VVVNEGDTL_					0	0	0			REV__nc|ENSG00000180316|Q8N8W4-2|PNPLA1	REV__nc|ENSG00000180316|Q8N8W4-2|PNPLA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	473.2481384277344	2	473.248015	944.481476	-0.25967	-0.00012289	0.32175	0.00015227	0.06208	2.9379E-05	473.2481063617417	28.965	1.9145	28.925	28.439	30.354	-0.039907					103	58	4	0	0	0	0.41566	1	1508	1508		56.721	0	1	555530	+		65373	22388	43433	43451	74218	74218					0.00701470935348425
VVVPLAVSV	9	Unmodified	_VVVPLAVSV_					0	0	0		ENSG00000232070|ENST00000556585|TMEM253	ENSG00000232070|ENST00000556585|TMEM253	ENSG00000232070|ENST00000556585|TMEM253	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	441.7877502441406	2	441.786579	881.558604	0.16384	7.2381E-05	2.6545	0.0011727	2.8183	0.0012451	441.78756675862314	44.954	2.5288	44.931	43.565	46.093	-0.023079					150	59	3	0	0	0	0.7932	1	3561	3561		19.36	4.6959	1	325400			65374	8738	43434	43452	74219	74219					0.11308733942325944
VVVPLISVT	9	Unmodified	_VVVPLISVT_					0	0	0			REV__ENST00000550963.1_1_12:72004384-72005014:-|nuORF	REV__ENST00000550963.1_1_12:72004384-72005014:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.7999267578125	2	463.799686	925.584819	-1.8082	-0.00083864	3.4777	0.001613	1.6695	0.00077431	463.80114984393606	41.326	1.6148	41.326	40.92	42.535	0					109	43	3	0	0	0	0.7932	1	2847	2847		11.511	0	1	489490	+		65375	28604	43435	43453	74220	74220					0.11905003113804469
VVVPLISVT	9	Unmodified	_VVVPLISVT_					0	0	0			REV__ENST00000550963.1_1_12:72004384-72005014:-|nuORF	REV__ENST00000550963.1_1_12:72004384-72005014:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8002624511719	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3056	3056		12.207	0	1	890090	+		65376	28604	43435	43453	74221	74221					0.11905003113804469
VVVPLISVT	9	Unmodified	_VVVPLISVT_					0	0	0			REV__ENST00000550963.1_1_12:72004384-72005014:-|nuORF	REV__ENST00000550963.1_1_12:72004384-72005014:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	463.79986572265625	2	463.799686	925.584819	-1.0017	-0.0004646	2.5173	0.0011675	1.5156	0.00070293	463.80070840526076	44.427	3.2492	44.393	42.632	45.882	-0.03347					207	75	4	0	0	0	0.7932	1	3432	3432		11.511	0	1	1294000	+		65377	28604	43435	43453	74222	74222					0.11905003113804469
VVVPLISVT	9	Unmodified	_VVVPLISVT_					0	0	0			REV__ENST00000550963.1_1_12:72004384-72005014:-|nuORF	REV__ENST00000550963.1_1_12:72004384-72005014:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	463.8006896972656	2	463.799686	925.584819	-1.1364	-0.00052705	3.1684	0.0014695	2.032	0.00094243	463.80100213571694	44.501	3.1965	44.509	42.656	45.852	0.0084534					161	80	3	0	0	0	0.7932	1	3051	3051		18.324	0	1	942760	+		65378	28604	43435	43453	74223	74223					0.11905003113804469
VVVPLISVT	9	Unmodified	_VVVPLISVT_					0	0	0			REV__ENST00000550963.1_1_12:72004384-72005014:-|nuORF	REV__ENST00000550963.1_1_12:72004384-72005014:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	463.8002014160156	2	463.799686	925.584819	-0.17541	-8.1354E-05	2.2522	0.0010446	2.0768	0.00096322	463.80054646214205	44.414	2.4337	44.356	42.598	45.032	-0.058258					151	59	4	0	0	0	0.7932	1	2978	2978		17.365	0	1	1091400	+		65379	28604	43435	43453	74224	74224					0.11905003113804469
VVVPMRKGP	9	Unmodified	_VVVPMRKGP_					0	0	0			REV__chr7:140696695-140702866|13|13.69|0.17|6.3|+|2|None,NDUFB2|1	REV__chr7:140696695-140702866|13|13.69|0.17|6.3|+|2|None,NDUFB2|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.797607421875	2	491.796955	981.579357	-2.4951	-0.0012271	-0.48982	-0.00024089	-2.985	-0.001468	491.79691795705514	63.228	1.9612	63.256	62.751	64.712	0.02813					100	71	2	0	0	0	0.69914	1	5980	5980		40.573	10.069	1	93294	+		65380	15902	43436	43454	74225	74225					0.08783001050346684
VVVPMRKGP	9	Unmodified	_VVVPMRKGP_					0	0	0			REV__chr7:140696695-140702866|13|13.69|0.17|6.3|+|2|None,NDUFB2|1	REV__chr7:140696695-140702866|13|13.69|0.17|6.3|+|2|None,NDUFB2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79620361328125	2	491.796955	981.579357	-0.70573	-0.00034708	-1.8748	-0.00092201	-2.5805	-0.0012691	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.76996	1	4468	4468		33.516	9.3128	1	772710	+		65381	15902	43436	43454	74226	74226					0.08783001050346684
VVVPRLYH	8	Unmodified	_VVVPRLYH_					0	0	0			REV__ENSG00000117000|ENST00000372771|RLF	REV__ENSG00000117000|ENST00000372771|RLF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79595947265625	2	491.795269	981.575986	-0.75954	-0.00037354	1.5722	0.0007732	0.81265	0.00039966	491.7959244094971	46.601	1.9125	46.572	45.843	47.756	-0.028782					158	52	4	0	0	0	0.87276	1	3935	3935		29.842	0.69198	1	3015000	+		65382	18241	43437	43455	74227	74227					0.08446074267988024
VVVPRLYH	8	Unmodified	_VVVPRLYH_					0	0	0			REV__ENSG00000117000|ENST00000372771|RLF	REV__ENSG00000117000|ENST00000372771|RLF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7947082519531	2	491.795269	981.575986	-0.46236	-0.00022739	1.5136	0.00074436	1.0512	0.00051697	491.7961437087858	67.192	1.3864	67.156	66.452	67.839	-0.035698					84	59	2	0	0	0	0.89457	1	6518	6518		37.028	9.1462	1	58996	+		65383	18241	43437	43455	74228	74228					0.08446074267988024
VVVPRLYH	8	Unmodified	_VVVPRLYH_					0	0	0			REV__ENSG00000117000|ENST00000372771|RLF	REV__ENSG00000117000|ENST00000372771|RLF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7956848144531	2	491.795269	981.575986	-0.72034	-0.00035426	1.4985	0.00073695	0.77816	0.00038269	491.7958614454625	45.142	1.3703	45.154	44.592	45.963	0.012058					80	34	3	0	0	0	0.82464	1	3236	3236		21.702	1.2205	1	396090	+		65384	18241	43437	43455	74229	74229					0.08446074267988024
VVVPVIVTT	9	Unmodified	_VVVPVIVTT_					0	0	0			REV__nc|ENSG00000166073|Q14439-3|GPR176	REV__nc|ENSG00000166073|Q14439-3|GPR176	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.7999572753906	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3079	3079		16.473	4.2663	1	890090	+		65385	30002	43438	43456	74230	74230					0.11905003113804469
VVVPVIVTT	9	Unmodified	_VVVPVIVTT_					0	0	0			REV__nc|ENSG00000166073|Q14439-3|GPR176	REV__nc|ENSG00000166073|Q14439-3|GPR176	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	463.80010986328125	2	463.799686	925.584819	-0.89357	-0.00041444	2.377	0.0011025	1.4835	0.00068803	463.80061868928385	44.371	2.5793	44.369	42.609	45.189	-0.002449					177	61	4	0	0	0	0.7932	1	3362	3362		18.324	5.3652	1	1516700	+		65386	30002	43438	43456	74231	74231					0.11905003113804469
VVVRSVRPGG	10	Unmodified	_VVVRSVRPGG_					0	0	0		ENSG00000147234|ENST00000683843|FRMPD3	ENSG00000147234|ENST00000683843|FRMPD3	ENSG00000147234|ENST00000683843|FRMPD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.3194580078125	2	513.314358	1024.61416	1.2841	0.00065913	3.2388	0.0016625	4.5229	0.0023217	513.3160054348587	50.9	1.2329	51.652	51.04	52.273	0.75174					46	29	2	0	0	0	0.86698	1	5056	5056		28.081	0	1	370860			65387	4890	43439	43457	74232	74232					0.10283960182664487
VVVSPLLYTCY	11	Unmodified	_VVVSPLLYTCY_					0	0	0		ENSG00000196208|ENST00000381486|GREB1;nc|ENSG00000196208|Q4ZG55-2|GREB1	ENSG00000196208|ENST00000381486|GREB1	ENSG00000196208|ENST00000381486|GREB1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	419.56085205078125	3	419.558025	1255.65225	2.0741	0.0008702	3.8976	0.0016353	5.9717	0.0025055	419.55960083493994	32.822	0.72305	32.82	32.493	33.216	-0.0016365					45	16	4	0	0	0	0.66009	1	1897	1897		37.508	6.9393	1	143060			65388	8026	43440	43458	74233	74233					0.03464665262458766
VVVVGCVSIL	10	Unmodified	_VVVVGCVSIL_					0	0	0			REV__ENSG00000170448|ENST00000507489|NFXL1	REV__ENSG00000170448|ENST00000507489|NFXL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3008728027344	2	494.298996	986.583439	2.3073	0.0011405	1.1641	0.0005754	3.4713	0.0017159	494.2995573158535	97.308	4.0754	97.252	96.543	100.62	-0.055542					398	94	7	0	0	0	0.84112	1	10534	10534		37.159	5.2042	1	53958000	+		65389	21661	43441	43459	74234	74234					0.08961045753392227
VVVVGCVSIL	10	Unmodified	_VVVVGCVSIL_					0	0	0			REV__ENSG00000170448|ENST00000507489|NFXL1	REV__ENSG00000170448|ENST00000507489|NFXL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.300537109375	2	494.298996	986.583439	-0.58723	-0.00029027	4.0172	0.0019857	3.43	0.0016955	494.30096807706656	97.042	3.913	97.273	96.652	100.57	0.23103					391	91	7	0	0	0	0.81018	2	10133	10133;10157		38.806	0.18592	1	65263000	+		65390	21661	43441	43459	74235;74236	74235					0.08961045753392227
VVVVGCVSIL	10	Unmodified	_VVVVGCVSIL_					0	0	0			REV__ENSG00000170448|ENST00000507489|NFXL1	REV__ENSG00000170448|ENST00000507489|NFXL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	494.3007507324219	2	494.298996	986.583439	0.76681	0.00037903	2.7292	0.001349	3.496	0.0017281	494.3003404628261	97.175	3.9541	97.338	96.662	100.62	0.16316					393	91	6	0	0	0	0.84112	1	10069	10069		37.159	5.2042	1	52135000	+		65391	21661	43441	43459	74237	74237					0.08961045753392227
VVVVLVLV	8	Unmodified	_VVVVLVLV_					0	0	0		ENST00000488591.1_1_10:44876209-44880453:-|nuORF;ENSG00000107562|ENST00000343575|CXCL12;nc|ENSG00000107562|P48061-5|CXCL12;nc|ENSG00000107562|P48061|CXCL12;nc|ENSG00000107562|P48061-6|CXCL12;nc|ENSG00000107562|P48061-3|CXCL12;nc|ENSG00000107562|P48061-4|CXCL12;nc|ENSG00000107562|P48061-7|CXCL12	ENST00000488591.1_1_10:44876209-44880453:-|nuORF	ENST00000488591.1_1_10:44876209-44880453:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.3157653808594	2	420.301865	838.589176	1.0854	0.00045619	-3.045	-0.0012798	-1.9596	-0.00082363	420.30070860365487	19.024	0.51771	18.547	18.357	18.875	-0.47694					14	11	2	0	0	0	0.4196	1	472	472		5.0869	0	1	22862			65392	2351	43442	43460	74238	74238					0.16342512327366876
VVVVLVLV	8	Unmodified	_VVVVLVLV_					0	0	0		ENST00000488591.1_1_10:44876209-44880453:-|nuORF;ENSG00000107562|ENST00000343575|CXCL12;nc|ENSG00000107562|P48061-5|CXCL12;nc|ENSG00000107562|P48061|CXCL12;nc|ENSG00000107562|P48061-6|CXCL12;nc|ENSG00000107562|P48061-3|CXCL12;nc|ENSG00000107562|P48061-4|CXCL12;nc|ENSG00000107562|P48061-7|CXCL12	ENST00000488591.1_1_10:44876209-44880453:-|nuORF	ENST00000488591.1_1_10:44876209-44880453:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	420.301865	838.589176	0.24047	0.00010107	-1.5457	-0.00064965	-1.3052	-0.00054858	420.3010475043185	19.192	0.35284	18.562	18.358	18.711	-0.62961	0.0076761	0.00046042	NaN	5.0869	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24049			65393	2351	43442	43460							0.16342512327366876
VVVVPLAVS	9	Unmodified	_VVVVPLAVS_					0	0	0		ENSG00000232070|ENST00000556585|TMEM253	ENSG00000232070|ENST00000556585|TMEM253	ENSG00000232070|ENST00000556585|TMEM253	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.787841796875	2	441.786579	881.558604	0.18761	8.2882E-05	2.8888	0.0012763	3.0764	0.0013591	441.7877584953803	39.042	2.2936	39.131	38.555	40.848	0.088371					215	68	5	0	0	0	0.7932	1	2403	2403		26.796	0	1	11532000			65394	8738	43443	43461	74239	74239					0.11308733942325944
VVVVPLAVS	9	Unmodified	_VVVVPLAVS_					0	0	0		ENSG00000232070|ENST00000556585|TMEM253	ENSG00000232070|ENST00000556585|TMEM253	ENSG00000232070|ENST00000556585|TMEM253	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.7872009277344	2	441.786579	881.558604	0.20936	9.2491E-05	2.4283	0.0010728	2.6377	0.0011653	441.78751566876696	41.612	3.2966	41.685	40.773	44.069	0.073418					243	90	4	0	0	0	0.7932	2	2655	2655;2664		26.796	1.3459	1	9571700			65395	8738	43443	43461	74240;74241	74240					0.11308733942325944
VVVVPVLLGLL	11	Unmodified	_VVVVPVLLGLL_					0	0	0			REV__nc|ENSG00000146839|Q9Y493-6|ZAN	REV__nc|ENSG00000146839|Q9Y493-6|ZAN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.34033203125	2	560.888835	1119.76312	0.40161	0.00022526	-3.647	-0.0020455	-3.2454	-0.0018203	560.8865706952904	101.95	0.19505	102.15	102.06	102.25	0.19484					5	4	2	0	0	0	0.17959	1	10722	10722		11.511	4.7755	1	105260	+		65396	20035	43444	43462	74242	74242					0.20802673032835628
VVVVTLPLS	9	Unmodified	_VVVVTLPLS_					0	0	0			REV__ENST00000491240.5_1_X:48433911-48434199:+|nuORF	REV__ENST00000491240.5_1_X:48433911-48434199:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	463.800048828125	2	463.799686	925.584819	0.27019	0.00012531	2.5304	0.0011736	2.8005	0.0012989	463.80060320625205	45.445	1.4152	45.487	45.029	46.444	0.042599					67	37	3	0	0	0	0.7932	1	3362	3362		24.203	0	1	210360	+		65397	27653	43445	43463	74243	74243					0.11905003113804469
VVVVVADLI	9	Unmodified	_VVVVVADLI_					0	0	0			REV__nc|ENSG00000122986|Q96D96-2|HVCN1	REV__nc|ENSG00000122986|Q96D96-2|HVCN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8010559082031	2	463.799686	925.584819	-1.7719	-0.00082179	3.3581	0.0015575	1.5862	0.00073568	463.8010845012308	44.242	2.7136	44.242	42.463	45.176	0					166	66	3	0	0	0	0.7932	1	3281	3281		11.511	0	1	890090	+		65398	18523	43446	43464	74244	74244					0.11905003113804469
VVVVVADLI	9	Unmodified	_VVVVVADLI_					0	0	0			REV__nc|ENSG00000122986|Q96D96-2|HVCN1	REV__nc|ENSG00000122986|Q96D96-2|HVCN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	463.8008728027344	2	463.799686	925.584819	-1.7446	-0.00080916	4.1636	0.0019311	2.4189	0.0011219	463.80146110344776	45.579	1.6988	45.579	45.089	46.788	0					73	42	3	0	0	0	0.76996	1	3437	3437		33.516	8.0654	1	279560	+		65399	18523	43446	43464	74245	74245					0.11905003113804469
VVVVVADLI	9	Unmodified	_VVVVVADLI_					0	0	0			REV__nc|ENSG00000122986|Q96D96-2|HVCN1	REV__nc|ENSG00000122986|Q96D96-2|HVCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	464.30120849609375	2	463.799686	925.584819	-0.22039	-0.00010222	2.8768	0.0013343	2.6564	0.0012321	463.80077563915114	45.485	0.74849	45.417	45.021	45.77	-0.068634					44	18	3	0	0	0	0.7932	1	3227	3227		17.365	0	1	207040	+		65400	18523	43446	43464	74246	74246					0.11905003113804469
VVWLRRLL	8	Unmodified	_VVWLRRLL_					0	0	0			REV__ENSG00000089154|ENST00000300648|GCN1	REV__ENSG00000089154|ENST00000300648|GCN1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	527.8497924804688	2	527.847836	1053.68112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.79	1	112.85	112.35	113.35	0.066025								0	0	0	0.30674	1	12129	12129		15.636	0.97212	1		+		65401	16963	43447	43465	74247	74247					0.15642615464412302
VVWLVYKRG	9	Unmodified	_VVWLVYKRG_					0	0	0			REV__ENSG00000127329|ENST00000334414|PTPRB	REV__ENSG00000127329|ENST00000334414|PTPRB	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3408813476562	2	560.337301	1118.66005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.04	1	115.02	114.52	115.52	-0.02433								0	0	0	0.29299	1	12748	12748		33.516	6.8227	1		+		65402	18728	43448	43466	74248	74248					0.10546605364879724
VVWMRGHG	8	Unmodified	_VVWMRGHG_					0	0	0		ENST00000479606.5_1_22:21351789-21352173:+|nuORF	ENST00000479606.5_1_22:21351789-21352173:+|nuORF	ENST00000479606.5_1_22:21351789-21352173:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.24261474609375	2	471.242347	940.47014	-0.21882	-0.00010312	3.2384	0.0015261	3.0196	0.001423	471.24368623226155	85.627	3.5823	85.685	84.499	88.081	0.057899					161	82	3	0	0	0	0.94132	1	8727	8727		54.765	10.234	1	246480			65403	12410	43449	43467	74249	74249					-0.002475848491144461
VVWNVHLRKM	10	Unmodified	_VVWNVHLRKM_					0	0	0			REV__ENSG00000197102|ENST00000360184|DYNC1H1	REV__ENSG00000197102|ENST00000360184|DYNC1H1	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.3677978515625	2	641.366067	1280.71758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.07	1	111.01	110.51	111.51	-0.059937								0	0	0	0.45132	1	12082	12082		29.15	3.5755	1		+		65404	23196	43450	43468	74250	74250					0.08845124298795781
VVYDSDKKLE	10	Unmodified	_VVYDSDKKLE_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	598.8244018554688	2	598.313886	1194.61322	0.90052	0.00053879	3.1805	0.0019029	4.081	0.0024417	598.8173991879654	69.871	0.47701	70.006	69.93	70.407	0.13506					44	24	2	0	0	0	0.73395	1	6344	6344		42.864	0.46813	1	1180000	+		65405	17017	43451	43469	74251	74251					0.02369656232417583
VVYKGNQT	8	Unmodified	_VVYKGNQT_					0	0	0		ENST00000466187.2_1_10:70105306-70105504:-|nuORF	ENST00000466187.2_1_10:70105306-70105504:-|nuORF	ENST00000466187.2_1_10:70105306-70105504:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	454.74481201171875	2	454.745442	907.476331	1.0531	0.00047889	-2.1634	-0.00098381	-1.1103	-0.00050492	454.74431898752607	103.74	1.4301	103.79	103.32	104.75	0.041489					80	34	3	0	0	0	0.86677	1	11312	11312		27.882	1.0861	1	827910			65406	12126	43452	43470	74252	74252					0.018892118633857535
VVYKGRRKGT	10	Unmodified	_VVYKGRRKGT_					0	0	0		ENSG00000168038|ENST00000301831|ULK4;ENST00000497684.1_1_3:41973315-41996251:-|nuORF;ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENSG00000168038|ENST00000301831|ULK4;ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	582.35400390625	2	582.354014	1162.69348	-0.28408	-0.00016544	-0.18668	-0.00010872	-0.47077	-0.00027415	582.3539590095555	107.8	1.0319	107.8	106.84	107.87	0					66	24	3	0	0	0	0.86718	1	11200	11200		27.882	2.4321	1	7275300			65407	6361;12018	43453	43471	74253	74253					0.11863607136797327
VVYKGRRKGT	10	Unmodified	_VVYKGRRKGT_					0	0	0		ENSG00000168038|ENST00000301831|ULK4;ENST00000497684.1_1_3:41973315-41996251:-|nuORF;ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENSG00000168038|ENST00000301831|ULK4;ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3533325195312	2	582.354014	1162.69348	0.15817	9.2113E-05	-1.1126	-0.00064794	-0.95444	-0.00055582	582.353229918753	103.41	3.8731	103.46	102.98	106.86	0.041489					385	92	6	0	0	0	0.8651	1	11164	11164		25.574	1.3713	1	78004000			65408	6361;12018	43453	43471	74254	74254					0.11863607136797327
VVYKGRRKGT	10	Unmodified	_VVYKGRRKGT_					0	0	0		ENSG00000168038|ENST00000301831|ULK4;ENST00000497684.1_1_3:41973315-41996251:-|nuORF;ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENSG00000168038|ENST00000301831|ULK4;ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.3540649414062	2	582.354014	1162.69348	0.72245	0.00042072	-1.6748	-0.00097534	-0.95238	-0.00055462	582.3529447465764	103.22	3.7979	103.4	102.84	106.64	0.18297					412	95	6	0	0	0	0.86218	1	11055	11055		32.812	2.4947	1	132960000			65409	6361;12018	43453	43471	74255	74255					0.11863607136797327
VVYKGRRKGT	10	Unmodified	_VVYKGRRKGT_					0	0	0		ENSG00000168038|ENST00000301831|ULK4;ENST00000497684.1_1_3:41973315-41996251:-|nuORF;ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENSG00000168038|ENST00000301831|ULK4;ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	582.3533935546875	2	582.354014	1162.69348	0.88325	0.00051437	-1.8039	-0.0010505	-0.92067	-0.00053616	582.3528598336045	103.33	3.7043	103.46	102.97	106.68	0.12622					400	92	6	0	0	0	0.86763	1	11233	11233		26.693	5.746	1	125340000			65410	6361;12018	43453	43471	74256	74256					0.11863607136797327
VVYKGRRKGT	10	Unmodified	_VVYKGRRKGT_					0	0	0		ENSG00000168038|ENST00000301831|ULK4;ENST00000497684.1_1_3:41973315-41996251:-|nuORF;ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENSG00000168038|ENST00000301831|ULK4;ENST00000460978.1_1_3:41979458-41996251:-|nuORF	ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3533935546875	2	582.354014	1162.69348	-1.3468	-0.00078429	0.41376	0.00024096	-0.93299	-0.00054333	582.3541515269974	103.36	3.7583	103.48	103	106.75	0.11494					398	93	6	0	0	0	0.8651	2	11087	11087;11267		26.693	2.1737	1	120000000			65411	6361;12018	43453	43471	74257;74258	74257					0.11863607136797327
VVYPWTQRF	9	Unmodified	_VVYPWTQRF_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3175659179688	2	598.316566	1194.61858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.404	1	70.404	69.904	70.904	0								0	0	0	0.36353	1	6274	6274		49.442	11.63	1			+	65412	8826;620	43454	43472	74259	74259					0.029054246055238764
VVYPWTQRF	9	Unmodified	_VVYPWTQRF_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.3182983398438	2	598.316566	1194.61858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.494	1	70.494	69.994	70.994	0								0	0	0	0.29273	1	6282	6282		40.778	14.085	1			+	65413	8826;620	43454	43472	74260	74260					0.029054246055238764
VVYPWTQRF	9	Unmodified	_VVYPWTQRF_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	598.818359375	2	598.316566	1194.61858	-0.55853	-0.00033418	0.39705	0.00023756	-0.16148	-9.6616E-05	598.3164468285976	70.139	0.50546	70.169	70.036	70.542	0.030495					54	25	3	0	0	0	0.18338	5	6632	6629;6632;6635;6644;6648		77.318	25.606	1	757770		+	65414	8826;620	43454	43472	74261;74262;74263;74264;74265	74262					0.029054246055238764
VVYPWTQRF	9	Unmodified	_VVYPWTQRF_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	598.320556640625	2	598.316566	1194.61858	-0.31013	-0.00018556	0.063764	3.8151E-05	-0.24637	-0.00014741	598.3164827633979	70.099	0.77539	70.061	69.794	70.57	-0.037865					68	40	2	0	0	0	0.15959	6	6786	6786;6788;6792;6806;6809;6815		82.241	29.013	1	916960		+	65415	8826;620	43454	43472	74266;74267;74268;74269;74270;74271	74266					0.029054246055238764
VVYPWTQRF	9	Unmodified	_VVYPWTQRF_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.3153686523438	2	598.316566	1194.61858	-1.6469	-0.00098536	1.1168	0.00066822	-0.53005	-0.00031714	598.3170815380768	69.966	0.56753	70.001	69.832	70.399	0.035614					57	26	3	0	0	0	0.19818	1	6697	6697		74.255	21.318	1	753790		+	65416	8826;620	43454	43472	74272	74272					0.029054246055238764
VVYPWTQRF	9	Unmodified	_VVYPWTQRF_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	598.3147583007812	2	598.316566	1194.61858	0.62039	0.00037119	-1.0087	-0.0006035	-0.38828	-0.00023232	598.3158612505514	69.83	0.59485	69.959	69.822	70.417	0.1291					45	29	2	0	0	0	0.10914	2	6335	6335;6344		90.601	26.394	1	810890		+	65417	8826;620	43454	43472	74273;74274	74273					0.029054246055238764
VVYPWTQRF	9	Unmodified	_VVYPWTQRF_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.3167114257812	2	598.316566	1194.61858	-0.65942	-0.00039454	0.22181	0.00013271	-0.43761	-0.00026183	598.3165658452776	70.035	0.58058	70.106	69.911	70.492	0.071037					45	27	2	0	0	0	0.67345	1	6338	6338		42.396	0	1	710120		+	65418	8826;620	43454	43472	74275	74275					0.029054246055238764
VVYPWTQRF	9	Unmodified	_VVYPWTQRF_					0	0	0		CON__Q3SX09;CON__P02070;ENSG00000213934|ENST00000330597|HBG1;ENSG00000213931|ENST00000396895|HBE1;ENSG00000196565|ENST00000336906|HBG2;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF;ENSG00000223609|ENST00000650601|HBD	CON__Q3SX09;ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	598.316566	1194.61858	0.90051	0.00053879	-1.2989	-0.00077714	-0.39836	-0.00023834	598.8173991879654	69.871	0.47701	70.006	69.93	70.407	0.13506	-0.044447	-0.0014729	NaN	90.601	44	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1180000		+	65419	8826;620	43454	43472							0.029054246055238764
VVYTVHRKEK	10	Unmodified	_VVYTVHRKEK_					0	0	0			REV__ENSG00000108592|ENST00000427159|FTSJ3	REV__ENSG00000108592|ENST00000427159|FTSJ3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2489013671875	3	420.247062	1257.71936	-1.8535	-0.00077893	2.1058	0.00088495	0.25228	0.00010602	420.2481192424616	46.092	0.49909	46.108	45.86	46.359	0.015511					18	14	2	0	0	0	0.86225	1	3370	3370		32.751	7.6245	1	79651	+		65420	17725	43455	43473	74276	74276					0.10080456588411835
VVYTVLAS	8	Unmodified	_VVYTVLAS_					0	0	0		ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.24591064453125	2	426.247286	850.48002	1.0559	0.00045007	-3.9444	-0.0016813	-2.8885	-0.0012312	426.2455229557475	87.647	3.9379	87.573	85.625	89.563	-0.074005					153	92	2	0	0	0	0.91005	1	9054	9054		42.474	7.2737	1	4306400			65421	8162	43456	43474	74277	74277					0.048798816372254805
VVYVARNPKDV	11	Unmodified	_VVYVARNPKDV_					0	0	0		ENST00000562941.1_1_16:29473130-29474884:+|nuORF;ENST00000562257.5_1_16:30212387-30214357:+|nuORF;nc|ENSG00000261052|P0DMM9-2|SULT1A3;ENST00000569959.5_1_16:30212049-30214229:+|nuORF;ENSG00000261052|ENST00000338971|SULT1A3;ENSG00000213648|ENST00000360423|SULT1A4;nc|ENSG00000261052|P0DMM9-3|SULT1A3	ENST00000562941.1_1_16:29473130-29474884:+|nuORF	ENST00000562941.1_1_16:29473130-29474884:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.5754699707031	3	420.575067	1258.70337	-1.8483	-0.00077734	2.5733	0.0010823	0.72501	0.00030492	420.57607565100795	46.864	0.92207	46.883	46.533	47.455	0.018967					71	25	5	0	0	0	0.72892	1	3488	3488		26.75	2.5179	1	1392800			65422	8597	43457	43475	74278	74278					0.08436750351484079
VVYVRPVTV	9	Unmodified	_VVYVRPVTV_					0	0	0			REV__nc|ENSG00000100503|Q8N4C6-5|NIN	REV__nc|ENSG00000100503|Q8N4C6-5|NIN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	516.3141479492188	2	516.316035	1030.61752	-0.25799	-0.00013321	-4.1781	-0.0021572	-4.4361	-0.0022904	516.3139177295379	99.003	4.055	99.225	97.903	101.96	0.22263					379	95	6	0	0	0	0.77546	1	10539	10539		31.955	0.42505	1	82226000	+		65423	29738	43458	43476	74279	74279					0.10343210236646883
VVYVSTAI	8	Unmodified	_VVYVSTAI_					0	0	0			REV__nc|ENSG00000100842|O43281-3|EFS	REV__nc|ENSG00000100842|O43281-3|EFS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.2460632324219	2	426.247286	850.48002	-1.843	-0.00078557	-1.0037	-0.00042784	-2.8467	-0.0012134	426.2467741737408	87.495	4.0009	87.665	85.686	89.687	0.16922					180	93	4	0	0	0	0.88915	1	8550	8550		35.201	9.7505	1	3180100	+		65424	29740	43459	43477	74280	74280					0.04879881637236849
VWERRQRQLWR	11	Unmodified	_VWERRQRQLWR_					0	0	0		chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3051147460938	3	538.302563	1611.88586	1.2455	0.00067047	4.1546	0.0022364	5.4002	0.0029069	538.3047341501328	109.96	1.3308	109.99	109.73	111.06	0.033096					84	48	2	0	0	0	0.85439	1	12107	12107		5.6988	2.2901	1	535530			65425	275	43460	43478	74281	74281					0.10439322536831241
VWGKGALLTG	10	Unmodified	_VWGKGALLTG_					0	0	0			REV__ENST00000536459.6_1_19:58978634-58978952:+|nuORF	REV__ENST00000536459.6_1_19:58978634-58978952:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.2906188964844	2	501.292559	1000.57057	-0.28392	-0.00014233	-3.9733	-0.0019918	-4.2572	-0.0021341	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.86348	1	10545	10545		31.53	1.0262	1	9038000	+		65426	28411	43461	43479	74282	74282					0.07030350685511166
VWLRGRGKKA	10	Unmodified	_VWLRGRGKKA_					0	0	0		ENST00000405510.5_2_22:39130923-39131043:-|nuORF	ENST00000405510.5_2_22:39130923-39131043:-|nuORF	ENST00000405510.5_2_22:39130923-39131043:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	585.8663330078125	2	585.864549	1169.71454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.943	1	24.614	24.114	25.114	-0.32825								0	0	0	0.45132	1	1242	1242		20.947	2.6848	1				65427	11263	43462	43480	74283	74283					0.1364761723632455
VWLRHLAALE	10	Unmodified	_VWLRHLAALE_					0	0	0		ENST00000470040.5_1_1:228334217-228334421:+|nuORF	ENST00000470040.5_1_1:228334217-228334421:+|nuORF	ENST00000470040.5_1_1:228334217-228334421:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.3547973632812	2	604.35094	1206.68733	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.161	1	82.315	81.815	82.815	0.15474								0	0	0	0.45132	1	7895	7895		34.173	6.0911	1				65428	12214	43463	43481	74284	74284					0.09225088905282064
VWPGALPKVLE	11	Unmodified	_VWPGALPKVLE_					0	0	0		nc|ENSG00000146926|Q8WXI3-3|ASB10;ENSG00000146926|ENST00000420175|ASB10	nc|ENSG00000146926|Q8WXI3-3|ASB10	nc|ENSG00000146926|Q8WXI3-3|ASB10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.8589477539062	2	604.855524	1207.69649	1.0196	0.00061673	3.5602	0.0021534	4.5798	0.0027701	604.8576899893071	82.698	1.1308	82.853	82.221	83.352	0.15473					67	26	3	0	0	0	0.69071	1	7936	7936		17.468	0	1	291410			65429	4871	43464	43482	74285	74285					0.10095437470931756
VWPTRSLRLKW	11	Unmodified	_VWPTRSLRLKW_					0	0	0			REV__nc|ENSG00000116985|P34820-2|BMP8B	REV__nc|ENSG00000116985|P34820-2|BMP8B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.28228759765625	3	481.285739	1440.83539	-0.83529	-0.00040201	-4.4179	-0.0021263	-5.2532	-0.0025283	481.2835872163677	101.92	1.5231	101.92	100.91	102.43	0					93	37	3	0	0	0	0.77511	1	10417	10417		16.53	0.6092	1	462650	+		65430	29799	43465	43483	74286	74286					0.13260400159083474
VWQLQNEH	8	Unmodified	_VWQLQNEH_					0	0	0			REV__ENSG00000185924|ENST00000331238|RTN4RL1	REV__ENSG00000185924|ENST00000331238|RTN4RL1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.2572631835938	2	527.259248	1052.50394	-1.7044	-0.00089867	-1.9434	-0.0010247	-3.6479	-0.0019234	527.258067551962	25.531	0.60729	25.531	25.33	25.938	0					55	28	3	0	0	0	0.90465	1	935	935		40.573	10.069	1	154210	+		65431	22805	43466	43484	74287	74287					-0.02020884876378659
VWSLGILLY	9	Unmodified	_VWSLGILLY_					0	0	0		ENSG00000102096|ENST00000376509|PIM2;ENST00000485431.1_1_X:48771410-48771858:-|nuORF;ENST00000479509.1_1_6:37140348-37141864:+|nuORF;ENSG00000137193|ENST00000373509|PIM1;nc|ENSG00000137193|P11309-2|PIM1	ENSG00000102096|ENST00000376509|PIM2	ENSG00000102096|ENST00000376509|PIM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	532.3104858398438	2	532.312961	1062.61137	-0.09908	-5.2741E-05	-3.5203	-0.0018739	-3.6194	-0.0019267	532.3109829176856	71.645	0.60355	71.605	71.407	72.011	-0.039001					33	21	2	0	0	0	0.72402	1	6987	6987		38.806	4.6336	1	171130			65432	1989	43467	43485	74288	74288					0.0825669200514767
VWSRKIQLVA	10	Unmodified	_VWSRKIQLVA_					0	0	0		ENST00000531381.1_1_11:121972385-121972643:-|nuORF	ENST00000531381.1_1_11:121972385-121972643:-|nuORF	ENST00000531381.1_1_11:121972385-121972643:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	400.58038330078125	3	400.580152	1198.71863	0.73407	0.00029406	0.18522	7.4197E-05	0.9193	0.00036825	400.5800545644303	111.89	0.61595	111.96	111.53	112.15	0.069542					52	18	4	0	0	0	0.85633	1	12039	12039		21.686	2.4231	1	4655100			65433	13358	43468	43486	74289	74289					0.12721661939372098
VWSRKIQLVA	10	Unmodified	_VWSRKIQLVA_					0	0	0		ENST00000531381.1_1_11:121972385-121972643:-|nuORF	ENST00000531381.1_1_11:121972385-121972643:-|nuORF	ENST00000531381.1_1_11:121972385-121972643:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	400.5800476074219	3	400.580152	1198.71863	3.4037	0.0013634	-2.3356	-0.00093561	1.068	0.00042784	400.57907559115637	112.21	1.9682	112.24	112.09	114.05	0.030602					127	83	4	0	0	0	0.86409	1	13579	13579		25.126	0.89417	1	5321000			65434	13358	43468	43486	74290	74290					0.12721661939372098
VWSVRRLH	8	Unmodified	_VWSVRRLH_					0	0	0			REV__ENST00000334512.9_1_10:81074688-81075099:+|nuORF	REV__ENST00000334512.9_1_10:81074688-81075099:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	526.80859375	2	526.809242	1051.60393	1.2418	0.00065418	-3.7046	-0.0019516	-2.4628	-0.0012974	526.8072201508533	100.99	2.1143	101.03	100.03	102.14	0.046349					121	49	4	0	0	0	0.60357	1	10848	10848		71.296	5.4925	1	2474600	+		65435	25157	43469	43487	74291	74291					0.08019397248085625
VWTRPVAAGLS	11	Unmodified	_VWTRPVAAGLS_					0	0	0			REV__ENST00000317204.10_1_11:1297294-1297405:-|nuORF	REV__ENST00000317204.10_1_11:1297294-1297405:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	578.82470703125	2	578.827298	1155.64004	-0.55116	-0.00031903	-3.2082	-0.001857	-3.7594	-0.002176	578.8252293904699	65.248	0.34756	65.285	65.115	65.462	0.037849					25	15	2	0	0	0	0.69931	1	5782	5782		31.634	1.3165	1	205380	+		65436	24963	43470	43488	74292	74292					0.06844809634276317
VWVVPTQLRR	10	Unmodified	_VWVVPTQLRR_					0	0	0		ENSG00000205978|ENST00000382554|NYNRIN;nc|ENSG00000205978|Q9P2P1-2|NYNRIN	ENSG00000205978|ENST00000382554|NYNRIN	ENSG00000205978|ENST00000382554|NYNRIN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3834838867188	2	627.377489	1252.74043	6.5832	0.0041301	1.563	0.00098061	8.1462	0.0051107	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.85466	1	13743	13743		20.947	0.95016	1	94412			65437	8549	43471	43489	74293	74293					0.12416466687909633
VWWGLAGGPG	10	Unmodified	_VWWGLAGGPG_					0	0	0			REV__ENST00000486327.6_1_19:47884337-47884637:+|nuORF	REV__ENST00000486327.6_1_19:47884337-47884637:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.2573547363281	2	500.255977	998.497401	-0.60498	-0.00030264	2.6222	0.0013118	2.0172	0.0010091	500.2570143399608	52.837	0.70274	53.261	52.97	53.673	0.42348					40	16	3	0	0	0	0.70264	1	5329	5329		44.531	3.7529	1	1020700	+		65438	27549	43472	43490	74294	74294					-0.0019077803709706131
VWWGLAGGPG	10	Unmodified	_VWWGLAGGPG_					0	0	0			REV__ENST00000486327.6_1_19:47884337-47884637:+|nuORF	REV__ENST00000486327.6_1_19:47884337-47884637:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	500.25689697265625	2	500.255977	998.497401	0.063706	3.1869E-05	1.6323	0.00081658	1.696	0.00084845	500.25660582831534	52.55	0.86823	53.164	52.828	53.696	0.61436					41	20	3	0	0	0	0.51323	1	5295	5295		54.765	15.512	1	1126100	+		65439	27549	43472	43490	74295	74295					-0.0019077803709706131
VYAPHPKLIGI	11	Unmodified	_VYAPHPKLIGI_					0	0	0			REV__ENSG00000099821|ENST00000588649|POLRMT;REV__ENST00000578759.1_1_17:60214444-60217453:-|nuORF	REV__ENST00000578759.1_1_17:60214444-60217453:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.3662719726562	2	604.363516	1206.71248	0.90474	0.00054679	3.9121	0.0023643	4.8168	0.0029111	604.3658025335928	104.46	3.5867	104.57	103.9	107.49	0.11685					431	88	7	0	0	0	0.69931	1	11029	11029		29.15	2.4566	1	105740000	+		65440	17107;29028	43473	43491	74296	74296					0.11739143707836774
VYAYRGLS	8	Unmodified	_VYAYRGLS_					0	0	0			REV__ENSG00000090674|ENST00000264079|MCOLN1	REV__ENSG00000090674|ENST00000264079|MCOLN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	464.7475280761719	2	464.747985	927.481417	-0.28675	-0.00013327	0.63286	0.00029412	0.34611	0.00016086	464.7479895288426	27.515	0.71511	27.477	27.165	27.88	-0.038523					32	16	4	0	0	0	0.92457	1	1307	1307		47.916	1.9636	1	76712	+		65441	16995	43474	43492	74297	74297					0.01477515725991907
VYDHARRAL	9	Unmodified	_VYDHARRAL_					0	0	0		ENSG00000007944|ENST00000356840|MYLIP	ENSG00000007944|ENST00000356840|MYLIP	ENSG00000007944|ENST00000356840|MYLIP	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	550.8018188476562	2	550.801614	1099.58868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.62	1	118.68	118.18	119.18	0.060577								0	0	0	0.34348	1	12476	12476		16.473	0	1				65442	731	43475	43493	74298	74298					0.04286485660213657
VYDIAAKF	8	Unmodified	_VYDIAAKF_					0	0	0		ENSG00000018510|ENST00000264167|AGPS	ENSG00000018510|ENST00000264167|AGPS	ENSG00000018510|ENST00000264167|AGPS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	463.753173828125	2	463.752736	925.490919	-0.93425	-0.00043326	1.0742	0.00049818	0.13999	6.4922E-05	463.7530647798806	56.691	0.68877	57.088	56.809	57.498	0.39672					30	15	4	0	0	0	0.36517	2	5854	5854;5865		82.241	30.905	1	659620			65443	832	43476	43494	74299;74300	74299					0.025192840115209947
VYDIAAKF	8	Unmodified	_VYDIAAKF_					0	0	0		ENSG00000018510|ENST00000264167|AGPS	ENSG00000018510|ENST00000264167|AGPS	ENSG00000018510|ENST00000264167|AGPS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	463.75225830078125	2	463.752736	925.490919	0.27546	0.00012775	0.071245	3.304E-05	0.34671	0.00016079	463.75250164341423	56.57	0.64745	57.129	56.876	57.523	0.55954					33	14	4	0	0	0	0.092239	2	5859	5859;5869		120.62	37	1	704310			65444	832	43476	43494	74301;74302	74301					0.025192840115209947
VYDLSIRGF	9	Unmodified	_VYDLSIRGF_					0	0	0		ENST00000467324.5_1_2:122513466-122522940:+|nuORF;ENSG00000211460|ENST00000389682|TSN;ENST00000498545.5_1_2:122513336-122522940:+|nuORF;ENST00000490104.5_1_2:122514991-122522940:+|nuORF	ENST00000467324.5_1_2:122513466-122522940:+|nuORF	ENST00000467324.5_1_2:122513466-122522940:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.2874145507812	2	535.287474	1068.5604	-0.20061	-0.00010739	0.62817	0.00033625	0.42755	0.00022886	535.2876683183888	70.245	0.8141	70.629	70.354	71.168	0.38416					37	19	3	0	0	0	0.066118	2	7783	7772;7783		101.25	30.451	1	566530			65445	8566	43477	43495	74303;74304	74304					0.028857429602794582
VYDLSIRGF	9	Unmodified	_VYDLSIRGF_					0	0	0		ENST00000467324.5_1_2:122513466-122522940:+|nuORF;ENSG00000211460|ENST00000389682|TSN;ENST00000498545.5_1_2:122513336-122522940:+|nuORF;ENST00000490104.5_1_2:122514991-122522940:+|nuORF	ENST00000467324.5_1_2:122513466-122522940:+|nuORF	ENST00000467324.5_1_2:122513466-122522940:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2867431640625	2	535.287474	1068.5604	-0.49128	-0.00026298	0.81376	0.0004356	0.32248	0.00017262	535.2877035500106	70.192	0.66888	70.739	70.462	71.131	0.54693					37	16	3	0	0	0	0.021781	2	7796	7796;7811		124.08	56.907	1	626620			65446	8566	43477	43495	74305;74306	74305					0.028857429602794582
VYDPTTNAWRQ	11	Unmodified	_VYDPTTNAWRQ_					0	0	0		nc|ENSG00000109466|O95198-3|KLHL2;ENSG00000109466|ENST00000226725|KLHL2;nc|ENSG00000109466|O95198-2|KLHL2	nc|ENSG00000109466|O95198-3|KLHL2	nc|ENSG00000109466|O95198-3|KLHL2	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.8865661621094	3	450.886081	1349.63641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.817	1	39.817	39.317	40.317	0								0	0	0	0.56276	1	2575	2575		23.378	0	1				65447	2463	43478	43496	74307	74307					-0.02441904930265082
VYDSLKKTRR	10	Unmodified	_VYDSLKKTRR_					0	0	0			REV__ENST00000483315.1_1_21:33975401-33976611:-|nuORF	REV__ENST00000483315.1_1_21:33975401-33976611:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3688354492188	2	633.369861	1264.72517	1.4972	0.00094828	-2.4939	-0.0015795	-0.99665	-0.00063125	633.3681812370636	95.449	2.3087	95.87	94.551	96.859	0.42051					197	55	4	0	0	0	0.86218	1	11317	11317		32.812	2.4947	1	3612700	+		65448	20634	43479	43497	74308	74308					0.10339555100040343
VYDTNPAKF	9	Unmodified	_VYDTNPAKF_					0	0	0		ENSG00000139433|ENST00000318348|GLTP	ENSG00000139433|ENST00000318348|GLTP	ENSG00000139433|ENST00000318348|GLTP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.3274536132812	2	527.763832	1053.51311	-0.026296	-1.3878E-05	-1.1011	-0.00058114	-1.1274	-0.00059502	527.7631627289392	44.279	0.52916	44.729	44.523	45.052	0.45025					26	12	3	0	0	0	0.20789	1	4059	4059		45.972	5.1941	1	597520			65449	4368	43480	43498	74309	74309					-0.011505363107289668
VYDVVEEKL	9	Unmodified	_VYDVVEEKL_					0	0	0		ENSG00000088179|ENST00000263708|PTPN4	ENSG00000088179|ENST00000263708|PTPN4	ENSG00000088179|ENST00000263708|PTPN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.2923583984375	2	547.292422	1092.57029	-0.18024	-9.8644E-05	-0.22124	-0.00012108	-0.40148	-0.00021973	547.2922445157892	54.272	1.3426	54.678	54.277	55.619	0.40663					52	31	2	0	0	0	9.4194E-09	5	5518	5494;5506;5518;5530;5542		163.15	78.235	1	6531900			65450	1585	43481	43499	74310;74311;74312;74313;74314	74312					0.0277088617501704
VYDVVEEKL	9	Unmodified	_VYDVVEEKL_					0	0	0		ENSG00000088179|ENST00000263708|PTPN4	ENSG00000088179|ENST00000263708|PTPN4	ENSG00000088179|ENST00000263708|PTPN4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.2921752929688	2	547.292422	1092.57029	-0.53075	-0.00029047	0.80655	0.00044142	0.2758	0.00015094	547.2925421759468	54.1	1.2144	54.685	54.291	55.505	0.58474					106	27	6	0	0	0	3.5946E-20	6	5508	5486;5496;5508;5520;5532;5546		176.44	68.357	1	6867000			65451	1585	43481	43499	74315;74316;74317;74318;74319;74320	74317					0.0277088617501704
VYDVVELKF	9	Unmodified	_VYDVVELKF_					0	0	0		ENSG00000149532|ENST00000439958|CPSF7;nc|ENSG00000149532|Q8N684|CPSF7;nc|ENSG00000149532|Q8N684-3|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.3054809570312	2	556.305332	1110.59611	-0.18865	-0.00010495	0.24271	0.00013502	0.054062	3.0075E-05	556.305376776185	74.816	0.82557	75.208	74.829	75.654	0.3911					76	19	5	0	0	0	0.021781	6	8433	8423;8433;8445;8457;8470;8482		124.08	59.873	1	6697600			65452	5034	43482	43500	74321;74322;74323;74324;74325;74326	74322					0.0452378041729844
VYDVVELKF	9	Unmodified	_VYDVVELKF_					0	0	0		ENSG00000149532|ENST00000439958|CPSF7;nc|ENSG00000149532|Q8N684|CPSF7;nc|ENSG00000149532|Q8N684-3|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	556.305419921875	2	556.305332	1110.59611	-0.10313	-5.7372E-05	0.22166	0.00012331	0.11852	6.5936E-05	556.3053397088682	74.665	0.86001	75.229	74.805	75.665	0.56458					78	20	5	0	0	0	0.021781	7	8449	8428;8437;8449;8461;8473;8485;8501		124.08	59.873	1	7020100			65453	5034	43482	43500	74327;74328;74329;74330;74331;74332;74333	74329					0.0452378041729844
VYFVIPLNYYK	11	Unmodified	_VYFVIPLNYYK_					0	0	0			REV__ENST00000378572.7_1_10:13672661-13672748:+|nuORF	REV__ENST00000378572.7_1_10:13672661-13672748:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	473.5947265625	3	473.595468	1417.76457	-0.4023	-0.00019053	0.71971	0.00034085	0.31741	0.00015032	473.59591526473343	21.498	0.24774	21.434	21.287	21.535	-0.064058					15	9	2	0	0	0	0.76251	1	592	592		19.263	0.73163	1	47886	+		65454	25902	43483	43501	74334	74334					0.07240262330924452
VYGKVKANLYI	11	Unmodified	_VYGKVKANLYI_					0	0	0			REV__ENSG00000218819|ENST00000405799|TDRD15	REV__ENSG00000218819|ENST00000405799|TDRD15	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.377197265625	2	634.374081	1266.73361	1.3188	0.00083664	3.8961	0.0024716	5.215	0.0033083	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.75041	1	12439	12439		21.96	0	1	12917000	+		65455	23699	43484	43502	74335	74335					0.11091109016706469
VYGKVKANLYI	11	Unmodified	_VYGKVKANLYI_					0	0	0			REV__ENSG00000218819|ENST00000405799|TDRD15	REV__ENSG00000218819|ENST00000405799|TDRD15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3765869140625	2	634.374081	1266.73361	0.9338	0.00059238	3.7061	0.0023511	4.6399	0.0029435	634.376227424202	109.98	1.2195	110.05	109.76	110.98	0.073685					116	43	3	0	0	0	0.72228	1	11816	11816		27.882	1.1893	1	11835000	+		65456	23699	43484	43502	74336	74336					0.11091109016706469
VYGKVKANLYI	11	Unmodified	_VYGKVKANLYI_					0	0	0			REV__ENSG00000218819|ENST00000405799|TDRD15	REV__ENSG00000218819|ENST00000405799|TDRD15	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3794555664062	2	634.374081	1266.73361	0.9339	0.00059244	3.9958	0.0025348	4.9297	0.0031273	634.3765130028539	118.8	0.2215	118.86	118.79	119.01	0.060577					18	8	3	0	0	0	0.73893	1	12493	12493		24.519	3.682	1	457870	+		65457	23699	43484	43502	74337	74337					0.11091109016706469
VYGKVKANLYI	11	Unmodified	_VYGKVKANLYI_					0	0	0			REV__ENSG00000218819|ENST00000405799|TDRD15	REV__ENSG00000218819|ENST00000405799|TDRD15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3772583007812	2	634.374081	1266.73361	2.2036	0.0013979	2.6691	0.0016932	4.8726	0.0030911	634.3750780706696	111.6	0.45724	111.65	111.39	111.85	0.041832					52	15	4	0	0	0	0.67493	1	13488	13488		35.618	7.5368	1	7905500	+		65458	23699	43484	43502	74338	74338					0.11091109016706469
VYGKVKANLYI	11	Unmodified	_VYGKVKANLYI_					0	0	0			REV__ENSG00000218819|ENST00000405799|TDRD15	REV__ENSG00000218819|ENST00000405799|TDRD15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8779907226562	2	634.374081	1266.73361	6.8434	0.0043413	-1.8757	-0.0011899	4.9677	0.0031514	634.3728367251069	114.83	1.6021	114.81	113.46	115.06	-0.016441					129	67	2	0	0	0	0.75041	1	13773	13773		21.96	1.9631	1	75725	+		65459	23699	43484	43502	74339	74339					0.11091109016706469
VYGKVKANLYI	11	Unmodified	_VYGKVKANLYI_					0	0	0			REV__ENSG00000218819|ENST00000405799|TDRD15	REV__ENSG00000218819|ENST00000405799|TDRD15	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	634.374081	1266.73361	2.2045	0.0013985	3.5466	0.0022499	5.7512	0.0036484	634.3764238852114	119.29	0.39951	119.24	119.01	119.41	-0.051682	0.17884	-7.7363E-05	NaN	24.519	21	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19613	+		65460	23699	43484	43502							0.11091109016706469
VYGPVFTLY	9	Unmodified	_VYGPVFTLY_					0	0	0		nc|ENSG00000138109|P11712-2|CYP2C9;ENSG00000138109|ENST00000260682|CYP2C9	nc|ENSG00000138109|P11712-2|CYP2C9	nc|ENSG00000138109|P11712-2|CYP2C9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.7791748046875	2	529.781493	1057.54843	-0.036677	-1.9431E-05	-3.8251	-0.0020265	-3.8618	-0.0020459	529.7793029461789	64.6	1.1094	64.603	64.064	65.173	0.0021362					72	32	4	0	0	0	0.69914	1	6043	6043		40.573	7.057	1	265940			65461	4272	43485	43503	74340	74340					0.021961262171089402
VYGPVFTLY	9	Unmodified	_VYGPVFTLY_					0	0	0		nc|ENSG00000138109|P11712-2|CYP2C9;ENSG00000138109|ENST00000260682|CYP2C9	nc|ENSG00000138109|P11712-2|CYP2C9	nc|ENSG00000138109|P11712-2|CYP2C9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.7797241210938	2	529.781493	1057.54843	-0.33938	-0.0001798	-3.4354	-0.00182	-3.7748	-0.0019998	529.7795579963132	64.39	0.96629	64.417	63.833	64.799	0.027145					56	25	3	0	0	0	0.67235	1	6097	6097		42.474	6.8562	1	324740			65462	4272	43485	43503	74341	74341					0.021961262171089402
VYILLFVIFLI	11	Unmodified	_VYILLFVIFLI_					0	0	0			REV__ENSG00000181273|ENST00000326855|OR5AK2	REV__ENSG00000181273|ENST00000326855|OR5AK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.6235656738281	3	451.624587	1351.85193	-1.3184	-0.00059544	0.74942	0.00033846	-0.56901	-0.00025698	451.6248586934689	45.054	0.80082	45.066	44.679	45.48	0.012058					32	18	2	0	0	0	0.78085	1	3221	3221		15.333	0.63944	1	113280	+		65463	22451	43486	43504	74342	74342					0.19008088272516943
VYKIRVLGT	9	Unmodified	_VYKIRVLGT_					0	0	0		ENST00000505895.5_1_4:110303564-110317380:-|nuORF	ENST00000505895.5_1_4:110303564-110317380:-|nuORF	ENST00000505895.5_1_4:110303564-110317380:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.8270874023438	2	524.829309	1047.64407	-1.5341	-0.00080515	-2.1406	-0.0011234	-3.6747	-0.0019286	524.8280472672277	102.21	1.1307	102.34	101.89	103.02	0.13569					72	27	3	0	0	0	0.76255	1	10673	10673		35.618	3.6634	1	626370			65464	12933	43487	43505	74343	74343					0.12214899128002799
VYKKMPSI	8	Unmodified	_VYKKMPSI_					0	0	0		ENSG00000183454|ENST00000330684|GRIN2A	ENSG00000183454|ENST00000330684|GRIN2A	ENSG00000183454|ENST00000330684|GRIN2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	483.278564453125	2	483.278063	964.541574	-0.91485	-0.00044213	2.8417	0.0013733	1.9269	0.00093121	483.27955288343264	95.596	2.0172	95.596	94.881	96.898	0					89	46	3	0	0	0	0.89962	1	9575	9575		38.806	5.2906	1	657390			65465	7533	43488	43506	74344	74344					0.05788490064878715
VYKKMPSI	8	Unmodified	_VYKKMPSI_					0	0	0		ENSG00000183454|ENST00000330684|GRIN2A	ENSG00000183454|ENST00000330684|GRIN2A	ENSG00000183454|ENST00000330684|GRIN2A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.2781677246094	2	483.278063	964.541574	-1.6694	-0.0008068	3.0755	0.0014863	1.4061	0.00067953	483.27961083626826	95.088	2.1013	95.291	94.82	96.921	0.20242					117	49	4	0	0	0	0.85277	1	9772	9772		25.45	2.4077	1	1301000			65466	7533	43488	43506	74345	74345					0.05788490064878715
VYKRFVGL	8	Unmodified	_VYKRFVGL_					0	0	0			REV__nc|ENSG00000151490|Q16827-5|PTPRO	REV__nc|ENSG00000151490|Q16827-5|PTPRO	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.29815673828125	2	491.297645	980.580737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.09	1	108.12	107.62	108.62	0.034355								0	0	0	0.30125	1	11883	11883		20.482	0	1		+		65467	20254	43489	43507	74346	74346					0.08966958410769621
VYKRGPVL	8	Unmodified	_VYKRGPVL_					0	0	0			REV__ENSG00000127329|ENST00000334414|PTPRB	REV__ENSG00000127329|ENST00000334414|PTPRB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.28912353515625	2	466.28982	930.565087	-0.64111	-0.00029894	0.64441	0.00030048	0.0033003	1.5389E-06	466.28999408550436	73.948	1.2575	73.992	73.721	74.978	0.043648					98	48	3	0	0	0	0.89457	2	7184	7133;7184		54.765	4.7401	1	991630	+		65468	18728	43490	43508	74347;74348	74348					0.09702671893705883
VYLKLPKAE	9	Unmodified	_VYLKLPKAE_					0	0	0			REV__ENST00000488928.1_1_2:171806716-171807969:+|nuORF	REV__ENST00000488928.1_1_2:171806716-171807969:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8168334960938	2	530.823692	1059.63283	-1.5146	-0.00080401	-3.6953	-0.0019616	-5.21	-0.0027656	530.8216536248212	88.732	1.109	88.904	88.538	89.647	0.17233					44	25	2	0	0	0	0.20789	1	8724	8724		23.042	0	1	1060400	+		65469	18151	43491	43509	74349	74349					0.1054007703382922
VYLNNKLKE	9	Unmodified	_VYLNNKLKE_					0	0	0		ENST00000475423.1_1_X:153991228-153993352:+|nuORF	ENST00000475423.1_1_X:153991228-153993352:+|nuORF	ENST00000475423.1_1_X:153991228-153993352:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8202514648438	2	560.821681	1119.62881	-0.40201	-0.00022545	-2.9229	-0.0016392	-3.3249	-0.0018647	560.8199126084926	92.305	2.2839	92.767	91.977	94.26	0.46249					128	53	3	0	0	0	0.78983	1	11011	11011		27.882	2.3082	1	273790			65470	12322	43492	43510	74350	74350					0.07377987540144204
VYLVGCLL	8	Unmodified	_VYLVGCLL_					0	0	0			REV__ENST00000528758.1_1_11:7507087-7531416:+|nuORF	REV__ENST00000528758.1_1_11:7507087-7531416:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	440.25640869140625	2	440.254057	878.493561	-0.15815	-6.9625E-05	3.1321	0.0013789	2.974	0.0013093	440.25528143106743	67.722	0.75465	67.743	67.424	68.179	0.021599					73	33	3	0	0	0	0.84567	1	6353	6353		24.504	1.4615	1	271080	+		65471	28254	43493	43511	74351	74351					0.049454161448238665
VYLVKVPG	8	Unmodified	_VYLVKVPG_					0	0	0			REV__ENSG00000141232|ENST00000499247|TOB1	REV__ENSG00000141232|ENST00000499247|TOB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7699279785156	2	437.773471	873.53239	-1.7749	-0.000777	-3.644	-0.0015953	-5.4189	-0.0023723	437.7717830608177	42.434	1.7664	42.867	42.22	43.986	0.4334					93	43	3	0	0	0	0.86288	1	3795	3795		26.796	0	1	1098100	+		65472	19668	43494	43512	74352	74352					0.09056464770844741
VYLYRRAR	8	Unmodified	_VYLYRRAR_					0	0	0			REV__ENSG00000085999|ENST00000371975|RAD54L	REV__ENSG00000085999|ENST00000371975|RAD54L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.2155151367188	2	548.82235	1095.63015	-0.38644	-0.00021209	2.8316	0.001554	2.4452	0.001342	548.8239059788842	55.135	0.54359	55.536	55.196	55.74	0.40101					20	12	2	0	0	0	0.4196	1	5603	5603		12.959	0	1	238810	+		65473	16904	43495	43513	74353	74353					0.0861566641956415
VYMLHMMYQ	9	Unmodified	_VYMLHMMYQ_					0	0	0		ENST00000491455.5_1_1:214454597-214505536:+|nuORF;ENSG00000143499|ENST00000366957|SMYD2	ENST00000491455.5_1_1:214454597-214505536:+|nuORF	ENST00000491455.5_1_1:214454597-214505536:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.8584594726562	2	608.271598	1214.52864	-0.67286	-0.00040928	2.4226	0.0014736	1.7498	0.0010643	608.2729798217181	67.097	0.46253	67.097	66.918	67.38	0					27	22	2	0	0	0	0.20789	1	5917	5917		35.201	21.064	1	60976			65474	4638	43496	43514	74354	74354					-0.07004032381155412
VYPILLAKMS	10	Unmodified	_VYPILLAKMS_					0	0	0			REV__ENST00000602430.1_1_3:51575458-51575656:+|nuORF	REV__ENST00000602430.1_1_3:51575458-51575656:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.8313598632812	2	567.833203	1133.65185	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.48	1	15.396	14.896	15.896	-0.083363								0	0	0	0.45132	1	46	46		26.693	1.1189	1		+		65475	29330	43497	43515	74355	74355					0.09037290333230885
VYPIVLFLG	9	Unmodified	_VYPIVLFLG_					0	0	0		ENSG00000166558|ENST00000299709|SLC38A8	ENSG00000166558|ENST00000299709|SLC38A8	ENSG00000166558|ENST00000299709|SLC38A8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8127746582031	2	510.810054	1019.60555	2.0738	0.0010593	3.6545	0.0018668	5.7284	0.0029261	510.811728357041	106.1	0.82207	106.22	105.9	106.72	0.12742					79	35	3	0	0	0	0.78292	1	12918	12918		29.842	0.69198	1	1055000			65476	6208	43498	43516	74356	74356					0.09653593493453627
VYPTNVLRKK	10	Unmodified	_VYPTNVLRKK_					0	0	0			REV__ENSG00000103642|ENST00000261893|LACTB	REV__ENSG00000103642|ENST00000261893|LACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.582763671875	3	406.583674	1216.72919	0.1552	6.31E-05	-3.2026	-0.0013021	-3.0474	-0.001239	406.58229348870145	17.386	0.35937	16.775	16.613	16.972	-0.6107					12	7	2	0	0	0	0.69342	1	257	257		45.022	3.5956	1	165440	+		65477	17425	43499	43517	74357	74357					0.12949644593800258
VYQPRPGKR	9	Unmodified	_VYQPRPGKR_					0	0	0		nc|ENSG00000039600|O94993-2|SOX30;ENSG00000039600|ENST00000265007|SOX30	nc|ENSG00000039600|O94993-2|SOX30	nc|ENSG00000039600|O94993-2|SOX30	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.8291015625	2	550.819807	1099.62506	-1.9807	-0.001091	1.2364	0.00068104	-0.74426	-0.00040995	550.8208416087888	42.952	0.36818	43.649	43.422	43.79	0.69754					13	8	2	0	0	0	0.20789	1	3875	3875		37.159	0	1	234380			65478	925	43500	43518	74358	74358					0.07923362556925895
VYRGLVALFTL	11	Unmodified	_VYRGLVALFTL_					0	0	0			REV__ENSG00000141699|ENST00000309428|RETREG3	REV__ENSG00000141699|ENST00000309428|RETREG3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	626.3754272460938	2	626.376623	1250.73869	-0.34968	-0.00021903	1.6722	0.0010474	1.3225	0.0008284	626.3774219156356	55.761	0.42214	55.792	55.652	56.075	0.030838					15	10	2	0	0	0	0.72739	1	5027	5027		27.047	1.4733	1	58600	+		65479	19707	43501	43519	74359	74359					0.123354128793153
VYSQRGQPLT	10	Unmodified	_VYSQRGQPLT_					0	0	0		ENSG00000151379|ENST00000281047|MSGN1	ENSG00000151379|ENST00000281047|MSGN1	ENSG00000151379|ENST00000281047|MSGN1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.806396484375	2	574.806562	1147.59857	-1.3326	-0.00076597	1.4206	0.00081658	0.088041	5.0607E-05	574.8072287376872	33.945	0.68733	33.945	33.651	34.339	0					36	19	2	0	0	0	0.66675	1	1787	1787		46.457	7.2039	1	241710			65480	5113	43502	43520	74360	74360					0.030676288749418745
VYSVGKHLFVS	11	Unmodified	_VYSVGKHLFVS_					0	0	0		nc|ENSG00000179846|Q17RQ9|NKPD1;ENSG00000179846|ENST00000686631|NKPD1	nc|ENSG00000179846|Q17RQ9|NKPD1	nc|ENSG00000179846|Q17RQ9|NKPD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	618.345703125	2	618.342781	1234.67101	1.8217	0.0011265	3.4255	0.0021182	5.2473	0.0032446	618.3447943757376	97.603	2.4577	97.988	96.782	99.24	0.38548					159	59	3	0	0	0	0.70737	1	11700	11700		30.318	1.1682	1	976090			65481	7297	43503	43521	74361	74361					0.06305962948522392
VYSVSVGEKLK	11	Unmodified	_VYSVSVGEKLK_					0	0	0		ENST00000398073.6_1_12:58217029-58217107:-|nuORF	ENST00000398073.6_1_12:58217029-58217107:-|nuORF	ENST00000398073.6_1_12:58217029-58217107:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.8467407226562	2	604.847896	1207.68124	-0.095899	-5.8004E-05	-2.7735	-0.0016775	-2.8694	-0.0017355	604.846117051297	96.108	3.1148	96.155	95.25	98.365	0.047707					211	72	4	0	0	0	0.73893	1	10274	10274		24.519	3.5723	1	638500			65482	11172	43504	43522	74362	74362					0.08570525883101254
VYTDDGAP	8	Unmodified	_VYTDDGAP_					0	0	0			REV__ENSG00000088827|ENST00000344754|SIGLEC1	REV__ENSG00000088827|ENST00000344754|SIGLEC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.18402099609375	2	419.184883	836.355213	-0.61734	-0.00025878	-3.4208	-0.0014339	-4.0381	-0.0016927	419.18379974001596	92.26	1.9431	92.723	91.934	93.877	0.46249					113	45	4	0	0	0	0.89457	1	10966	10966		37.028	1.8278	1	2961200	+		65483	16948	43505	43523	74363	74363					-0.06951035569943542
VYTQYVAMC	9	Unmodified	_VYTQYVAMC_					0	0	0			REV__ENSG00000119203|ENST00000238112|CPSF3	REV__ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.2422485351562	2	539.240821	1076.46709	0.82613	0.00044549	1.8665	0.0010065	2.6927	0.001452	539.2416577167436	61.906	0.75049	61.873	61.511	62.261	-0.033169					56	28	3	0	0	0	0.5393	1	5872	5872		50.025	5.4935	1	574740	+		65484	18342	43506	43524	74364	74364					-0.0680864080882202
VYTVVLTG	8	Unmodified	_VYTVVLTG_					0	0	0			REV__ENSG00000162654|ENST00000355754|GBP4	REV__ENSG00000162654|ENST00000355754|GBP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.2460021972656	2	426.247286	850.48002	-1.7038	-0.00072625	-1.2223	-0.00052102	-2.9262	-0.0012473	426.246697883185	87.448	3.9173	87.649	85.72	89.637	0.20114					165	92	2	0	0	0	0.86288	1	8657	8657		26.796	0	1	4015800	+		65485	20832	43507	43525	74365	74365					0.048798816372254805
VYTVVLTG	8	Unmodified	_VYTVVLTG_					0	0	0			REV__ENSG00000162654|ENST00000355754|GBP4	REV__ENSG00000162654|ENST00000355754|GBP4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	426.24560546875	2	426.247286	850.48002	0.61593	0.00026254	-3.4632	-0.0014762	-2.8473	-0.0012137	426.24572360202285	87.518	4.0945	87.668	85.602	89.696	0.14956					180	96	4	0	0	0	0.88915	1	8735	8735		35.201	3.2459	1	3688500	+		65486	20832	43507	43525	74366	74366					0.048798816372254805
VYVAEATG	8	Unmodified	_VYVAEATG_					0	0	0			REV__ENSG00000115665|ENST00000264047|SLC5A7	REV__ENSG00000115665|ENST00000264047|SLC5A7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.2030029296875	2	405.205618	808.396684	-0.18782	-7.6105E-05	-1.9721	-0.00079909	-2.1599	-0.0008752	405.20481127463523	77.736	2.7861	77.788	77.332	80.118	0.052696					165	97	3	0	0	0	0.85277	1	7529	7529		25.45	0	1	140160	+		65487	18141	43508	43526	74367	74367					-0.015178548106177914
VYVLHKLLL	9	Unmodified	_VYVLHKLLL_					0	0	0			REV__nc|ENSG00000164691|Q8N103-4|TAGAP	REV__nc|ENSG00000164691|Q8N103-4|TAGAP	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	549.6517944335938	2	549.357702	1096.70085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.865	1	64.991	64.491	65.491	0.12545								0	0	0	0.33301	1	5732	5732		19.36	0	1		+		65488	21104	43509	43527	74368	74368					0.15636946684526265
VYVNNLLVC	9	Unmodified	_VYVNNLLVC_					0	0	0		ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.7847290039062	2	518.778428	1035.5423	-0.30003	-0.00015565	-3.4083	-0.0017682	-3.7083	-0.0019238	519.2782255602177	28.657	0.24202	28.628	28.408	28.65	-0.029207					7	5	2	0	0	0	0.20789	1	1731	1731		31.955	16.313	1	81327			65489	8508	43510	43528	74369	74369					0.02595284713925139
VYVSKANW	8	Unmodified	_VYVSKANW_					0	0	0			REV__ENSG00000188690|ENST00000368797|UROS	REV__ENSG00000188690|ENST00000368797|UROS	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	483.757080078125	2	483.75581	965.497067	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.476	1	18.451	17.951	18.951	-0.024035								0	0	0	0.29199	1	332	332		29.842	1.7601	1		+		65490	23023	43511	43529	74370	74370					0.012938022430375895
VYVTQMSH	8	Unmodified	_VYVTQMSH_					0	0	0		nc|ENSG00000274150|A8MWK0|FADS2B	nc|ENSG00000274150|A8MWK0|FADS2B	nc|ENSG00000274150|A8MWK0|FADS2B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	482.7575988769531	2	482.731477	963.448402	-0.54713	-0.00026412	-3.4835	-0.0016816	-4.0307	-0.0019457	482.7297747950753	46.844	0.60252	47.316	47.214	47.817	0.47139					19	13	2	0	0	0	0.4196	1	4429	4429		38.806	1.647	1	252530			65491	15314	43512	43530	74371	74371					-0.03478434388364349
VYVVNYPKD	9	Unmodified	_VYVVNYPKD_					0	0	0		ENSG00000120948|ENST00000240185|TARDBP;ENST00000456601.1_1_2:239140521-239140857:+|nuORF	ENSG00000120948|ENST00000240185|TARDBP	ENSG00000120948|ENST00000240185|TARDBP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	548.7501831054688	2	548.787307	1095.56006	-0.26305	-0.00014436	1.4916	0.00081859	1.2286	0.00067423	548.7871969782531	54.562	0.16795	54.968	54.864	55.032	0.40663					5	3	2	0	0	0	0.20789	1	5558	5558		30.504	4.9296	1	108790			65492	3160	43513	43531	74372	74372					0.016103232404248047
WAALHSRHSQP	11	Unmodified	_WAALHSRHSQP_					0	0	0			REV__ENST00000330651.10_1_22:50703357-50703866:-|nuORF	REV__ENST00000330651.10_1_22:50703357-50703866:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	645.322265625	2	645.328528	1288.6425	0.1295	8.3573E-05	-4.1717	-0.0026921	-4.0422	-0.0026085	645.3256819340743	61.949	0.44659	61.978	61.738	62.185	0.029575					29	16	2	0	0	0	0.68532	1	5782	5782		33.922	1.9668	1	208080	+		65493	25113	43514	43532	74373	74373					0.009726580919505068
WAAPGSRPPLY	11	Unmodified	_WAAPGSRPPLY_					0	0	0			REV__ENSG00000105464|ENST00000263269|GRIN2D	REV__ENSG00000105464|ENST00000263269|GRIN2D	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	607.6713256835938	2	607.819473	1213.62439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.533	1	58.643	58.143	59.143	0.11027								0	0	0	0.56276	1	4995	4995		25.574	0.12388	1		+		65494	17542	43515	43533	74374	74374					0.026125231172272834
WADDVKNKY	9	Unmodified	_WADDVKNKY_					0	0	0			REV__ENSG00000196569|ENST00000421865|LAMA2	REV__ENSG00000196569|ENST00000421865|LAMA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	569.7776489257812	2	569.780013	1137.54547	-0.34656	-0.00019746	-3.0575	-0.0017421	-3.404	-0.0019396	569.7780779655194	23.853	0.60036	23.908	23.63	24.23	0.055487					40	15	3	0	0	0	0.69624	1	836	836		40.778	2.9666	1	132980	+		65495	23147	43516	43534	74375	74375					-0.017797489077111095
WAFHLEPWWR	10	Unmodified	_WAFHLEPWWR_					0	0	0			REV__ENST00000464984.1_1_10:29797084-29811487:-|nuORF	REV__ENST00000464984.1_1_10:29797084-29811487:-|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.5695495605469	3	476.571768	1426.69348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.952	1	45.952	45.452	46.452	0								0	0	0	0.45132	1	3428	3428		21.686	2.4231	1		+		65496	27102	43517	43535	74376	74376					-0.00280392863214729
WAGIVLPAR	9	Unmodified	_WAGIVLPAR_					0	0	0		ENST00000608937.5_1_9:137000533-137000803:+|nuORF	ENST00000608937.5_1_9:137000533-137000803:+|nuORF	ENST00000608937.5_1_9:137000533-137000803:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7951354980469	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.9	1	63.866	63.366	64.366	-0.034252								0	0	0	0.32159	1	6077	6077		23.042	0	1				65497	14479	43518	43536	74377	74377					0.08446074267976655
WAIHGAKLLTK	11	Unmodified	_WAIHGAKLLTK_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.3722534179688	2	619.374415	1236.73428	0.91931	0.0005694	-4.3463	-0.002692	-3.4269	-0.0021226	619.3720836676316	101.53	1.7011	101.67	101.29	102.99	0.14102					92	41	4	0	0	0	0.77421	1	10685	10685		16.717	1.3843	1	2053400	+		65498	16877	43519	43537	74378	74378					0.12537948456406411
WAIRKLGL	8	Unmodified	_WAIRKLGL_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.8057861328125	2	478.805637	955.596721	-0.025303	-1.2115E-05	0.1733	8.2978E-05	0.148	7.0862E-05	478.80566496431277	41.493	1.1693	41.447	40.834	42.003	-0.045471					50	34	2	0	0	0	0.91005	1	2748	2748		42.474	7.2737	1	322860			65499	6039	43520	43538	74379	74379					0.11714664647661266
WAKLRGLI	8	Unmodified	_WAKLRGLI_					0	0	0		ENSG00000161544|ENST00000293230|CYGB	ENSG00000161544|ENST00000293230|CYGB	ENSG00000161544|ENST00000293230|CYGB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	478.8050537109375	2	478.805637	955.596721	-0.91897	-0.00044001	1.618	0.00077472	0.69906	0.00033471	478.8062344602325	41.651	1.2493	41.655	41.077	42.326	0.0044022					74	33	3	0	0	0	0.80706	1	2765	2765		19.36	1.0356	1	258200			65500	5640	43521	43539	74380	74380					0.11714664647661266
WALIRIDPPL	10	Unmodified	_WALIRIDPPL_					0	0	0			REV__ENSG00000110060|ENST00000227474|PUS3	REV__ENSG00000110060|ENST00000227474|PUS3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.8561401367188	2	597.355691	1192.69683	2.4166	0.0014436	-2.8752	-0.0017175	-0.45857	-0.00027393	597.8546072532538	94.475	5.546	94.416	93.05	98.596	-0.059212					416	130	5	0	0	0	0.86718	1	10175	10175		27.882	4.3595	1	8047600	+		65501	17791	43522	43540	74381	74381					0.10818857190793096
WALLTLLTT	9	Unmodified	_WALLTLLTT_					0	0	0		ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3129272460938	2	516.310418	1030.60628	3.1033	0.0016022	4.4262	0.0022853	7.5295	0.0038875	516.312736387189	103.55	1.1906	103.5	102.99	104.18	-0.043755					71	28	3	0	0	0	0.7932	1	11328	11328		24.203	1.1603	1	574770			65502	5124	43523	43541	74382	74382					0.09220388142512093
WALLVAVEM	9	Unmodified	_WALLVAVEM_					0	0	0		ENST00000506360.5_1_4:8220037-8234255:+|nuORF;ENST00000502669.5_1_4:8220037-8239209:+|nuORF;ENST00000515682.5_1_4:8207046-8242679:+|nuORF;ENSG00000125089|ENST00000245105|SH3TC1	ENST00000506360.5_1_4:8220037-8234255:+|nuORF	ENST00000506360.5_1_4:8220037-8234255:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.2850952148438	2	516.283346	1030.55214	0.26127	0.00013489	2.9273	0.0015113	3.1886	0.0016462	516.2848878724776	36.804	0.57116	36.744	36.389	36.96	-0.060337					25	16	2	0	0	0	0.7932	1	2065	2065		26.796	0.10319	1	103430			65503	3373	43524	43542	74383	74383					0.03808472719288147
WAPLPHPL	8	Unmodified	_WAPLPHPL_					0	0	0		chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.2852478027344	2	465.763438	929.512323	-1.0934	-0.00050928	-1.8862	-0.0008785	-2.9796	-0.0013878	465.762517214481	52.147	0.73828	52.188	51.8	52.538	0.040596					38	23	2	0	0	0	0.4196	1	4153	4153		24.504	1.4615	1	78487			65504	107	43525	43543	74384	74384					0.044747138308935064
WAPLPHPL	8	Unmodified	_WAPLPHPL_					0	0	0		chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	465.763438	929.512323	-0.03017	-1.4052E-05	-3.2692	-0.0015227	-3.2993	-0.0015367	465.7618438614868	52.006	0.81204	52.004	51.614	52.426	-0.0020447	-0.054544	-0.00069357	NaN	24.504	32	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72174			65505	107	43525	43543							0.044747138308935064
WAPLPHPL	8	Unmodified	_WAPLPHPL_					0	0	0		chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	465.763438	929.512323	-0.6716	-0.00031281	-2.3548	-0.0010968	-3.0264	-0.0014096	465.76229518220543	52.003	0.71848	51.979	51.653	52.371	-0.02343	-0.078932	0.00015814	NaN	24.504	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48221			65506	107	43525	43543							0.044747138308935064
WAPLPHPL	8	Unmodified	_WAPLPHPL_					0	0	0		chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	chr11:65856242-65857865|16|121.69|0.81|7.23|-|0|CFL1,None|1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	465.763438	929.512323	-0.57622	-0.00026838	-2.3057	-0.0010739	-2.8819	-0.0013423	465.7621900468186	52.024	0.71196	52.037	51.639	52.351	0.012436	-0.02181	0.00020391	NaN	24.504	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76190			65507	107	43525	43543							0.044747138308935064
WAPPWGWCCC	10	Unmodified	_WAPPWGWCCC_					0	0	0			REV__ENST00000393229.3_1_9:135117391-135118432:+|nuORF	REV__ENST00000393229.3_1_9:135117391-135118432:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.26416015625	2	604.727358	1207.44016	0.12878	7.788E-05	1.416	0.00085629	1.5448	0.00093417	604.7282376437574	27.628	0.27942	27.59	27.434	27.713	-0.038525					9	6	2	0	0	0	0.37624	1	1332	1332		7.6903	0	1	16251	+		65508	26050	43526	43544	74385	74385					-0.1552602790097808
WARAAPTK	8	Unmodified	_WARAAPTK_					0	0	0			REV__ENST00000338961.10_1_9:130883279-130883423:-|nuORF	REV__ENST00000338961.10_1_9:130883279-130883423:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.7550354003906	2	450.756144	899.497735	0.36741	0.00016561	-4.3298	-0.0019517	-3.9623	-0.0017861	450.75394529589596	81.556	6.6346	81.493	77.699	84.334	-0.062943					349	182	4	0	0	0	0.87064	2	8249	8249;8261		45.952	7.1458	1	394230	+		65509	25226	43527	43545	74386;74387	74386					0.0439664168274021
WARAAPTK	8	Unmodified	_WARAAPTK_					0	0	0			REV__ENST00000338961.10_1_9:130883279-130883423:-|nuORF	REV__ENST00000338961.10_1_9:130883279-130883423:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.75482177734375	2	450.756144	899.497735	-1.264	-0.00056978	-3.0711	-0.0013843	-4.3351	-0.0019541	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.89043	1	7765	7765		35.618	1.4457	1	414240	+		65510	25226	43527	43545	74388	74388					0.0439664168274021
WARALLLG	8	Unmodified	_WARALLLG_					0	0	0		ENSG00000129749|ENST00000250699|CHRNA10	ENSG00000129749|ENST00000250699|CHRNA10	ENSG00000129749|ENST00000250699|CHRNA10	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.2740783691406	2	450.276712	898.538872	-1.247	-0.00056151	-3.0605	-0.0013781	-4.3075	-0.0019396	450.2752637415859	95.005	1.8382	95.236	94.9	96.739	0.23103					104	43	3	0	0	0	0.86791	1	9776	9776		28.254	5.2118	1	829000			65511	3605	43528	43546	74389	74389					0.08554402722234045
WARGLGQL	8	Unmodified	_WARGLGQL_					0	0	0		nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	nc|ENSG00000080345|Q5UIP0-2|RIF1	nc|ENSG00000080345|Q5UIP0-2|RIF1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.7546081542969	2	450.756144	899.497735	-1.5537	-0.00070033	-2.7815	-0.0012538	-4.3352	-0.0019541	450.75482443951	81.399	4.453	81.514	80.352	84.805	0.11425					204	106	3	0	0	0	0.88915	1	7708	7708		35.201	4.6971	1	298090			65512	1439	43529	43547	74390	74390					0.043966416827515786
WARLPLQV	8	Unmodified	_WARLPLQV_					0	0	0			REV__ENST00000496105.1_1_3:113169108-113212968:-|nuORF	REV__ENST00000496105.1_1_3:113169108-113212968:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956848144531	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.80706	1	3946	3946		19.36	0	1	1346800	+		65513	20942	43530	43548	74391	74391					0.08446074267988024
WARPCPHLY	9	Unmodified	_WARPCPHLY_					0	0	0		ENST00000587928.5_1_19:10792552-10792801:+|nuORF	ENST00000587928.5_1_19:10792552-10792801:+|nuORF	ENST00000587928.5_1_19:10792552-10792801:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	572.6476440429688	2	571.781836	1141.54912	0.51549	0.00029475	-0.16671	-9.5323E-05	0.34878	0.00019943	571.7809445301211	22.387	0.23879	21.776	21.672	21.91	-0.6107					6	5	2	0	0	0	0.20789	1	920	920		19.36	0	1	26903			65514	14202	43531	43549	74392	74392					-0.015993576148503053
WARSIEKKNRK	11	Unmodified	_WARSIEKKNRK_					0	0	0			REV__AluJb_dup56968|chr8:98045693-98046014:+|3.882668160277041|0.0002169198745066|14.13|63.0|3|1|sense	REV__AluJb_dup56968|chr8:98045693-98046014:+|3.882668160277041|0.0002169198745066|14.13|63.0|3|1|sense	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.6130676269531	3	472.612515	1414.81572	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.64	1	116.67	116.17	117.17	0.026466								0	0	0	0.56276	1	12816	12816		14.086	0	1		+		65515	15380	43532	43550	74393	74393					0.12490024148337397
WARTQVIPLVL	11	Unmodified	_WARTQVIPLVL_					0	0	0			REV__ENST00000375206.6_1_9:100008408-100053768:+|nuORF	REV__ENST00000375206.6_1_9:100008408-100053768:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	432.5976257324219	3	432.599324	1294.77614	-1.5719	-0.00068002	-2.1954	-0.00094973	-3.7673	-0.0016298	432.5984109358272	105.99	1.0468	106.14	105.65	106.69	0.14843					117	25	6	0	0	0	0.7342	1	11365	11365		22.562	0	1	44749000	+		65516	25807	43533	43551	74394	74394					0.14054504144928615
WASQRSSAR	9	Unmodified	_WASQRSSAR_					0	0	0		ENSG00000275832|ENST00000622683|ARHGAP23;nc|ENSG00000275832|Q9P227-2|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	525.2868041992188	2	524.767771	1047.52099	0.29794	0.00015635	1.9401	0.0010181	2.2381	0.0011745	524.7688825266619	51.648	0.40859	51.66	51.442	51.851	0.012436					12	9	2	0	0	0	0.20789	1	4462	4462		24.519	0	1	60473			65517	9007	43534	43552	74395	74395					-0.0008696427059931011
WATAAAKAAA	10	Unmodified	_WATAAAKAAA_					0	0	0		ENST00000492950.5_3_1:161129274-161129415:+|nuORF	ENST00000492950.5_3_1:161129274-161129415:+|nuORF	ENST00000492950.5_3_1:161129274-161129415:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	466.2538757324219	2	466.253434	930.492316	-1.4449	-0.0006737	2.2531	0.0010505	0.80814	0.0003768	466.2544727472462	65.706	0.83112	65.706	65.012	65.843	0					75	44	2	0	0	0	0.82886	1	5789	5789		37.812	7.97	1	377470			65518	12712	43535	43553	74396	74396					0.0242891810025867
WAVRKLGRAR	10	Unmodified	_WAVRKLGRAR_					0	0	0			REV__ENST00000431510.1_1_3:39425059-39430855:+|nuORF	REV__ENST00000431510.1_1_3:39425059-39430855:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	403.9293212890625	3	404.919391	1211.73634	-1.8029	-0.00073001	-0.50329	-0.00020379	-2.3062	-0.00093381	404.91955432030113	45.481	0.85155	45.481	45.049	45.901	0					25	20	2	0	0	0	0.37624	1	3335	3335		14.694	2.487	1	40193	+		65519	26618	43536	43554	74397	74397					0.13894421984878136
WCCCCSCS	8	Unmodified	_WCCCCSCS_					0	0	0		ENSG00000091844|ENST00000206262|RGS17;ENSG00000171700|ENST00000395042|RGS19;nc|ENSG00000147509|O76081-5|RGS20;nc|ENSG00000147509|O76081-6|RGS20;nc|ENSG00000147509|O76081-2|RGS20;ENSG00000147509|ENST00000297313|RGS20	ENSG00000091844|ENST00000206262|RGS17	ENSG00000091844|ENST00000206262|RGS17	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	447.76092529296875	2	447.607205	893.199857	1.3765	0.00061613	-1.3753	-0.00061559	0.001197	5.3576E-07	447.6068874329846	23.815	0.1683	23.241	23.136	23.304	-0.57415					5	3	2	0	0	0	0.4196	1	1088	1088		4.6817	3.5863	1	20135			65520	1684	43537	43555	74398	74398					-0.25101508555030705
WCLIPSLNR	9	Unmodified	_WCLIPSLNR_					0	0	0			REV__ENST00000437111.1_1_10:52389508-52390123:-|nuORF	REV__ENST00000437111.1_1_10:52389508-52390123:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.29736328125	2	551.297319	1100.58008	0.35596	0.00019624	2.2459	0.0012382	2.6019	0.0014344	551.2983762488637	32.057	0.54276	32.006	31.778	32.32	-0.051033					20	11	2	0	0	0	0.78528	1	1854	1854		29.17	2.4771	1	55560	+		65521	26701	43538	43556	74399	74399					0.033817956993971166
WCMPHPKKP	9	Unmodified	_WCMPHPKKP_					0	0	0		ENST00000513638.5_1_1:89876036-89886759:+|nuORF;ENST00000394662.2_1_1:89876036-89887275:+|nuORF	ENST00000513638.5_1_1:89876036-89886759:+|nuORF	ENST00000513638.5_1_1:89876036-89886759:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	562.2794189453125	2	562.280615	1122.54668	-0.96118	-0.00054045	0.39381	0.00022143	-0.56736	-0.00031902	562.2805396626987	38.88	0.60219	38.892	38.582	39.184	0.011173					29	13	3	0	0	0	0.69914	1	2692	2692		40.573	2.7611	1	83880			65522	11073	43539	43557	74400	74400					-0.009695293441836839
WCMPHPKKP	9	Unmodified	_WCMPHPKKP_					0	0	0		ENST00000513638.5_1_1:89876036-89886759:+|nuORF;ENST00000394662.2_1_1:89876036-89887275:+|nuORF	ENST00000513638.5_1_1:89876036-89886759:+|nuORF	ENST00000513638.5_1_1:89876036-89886759:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	562.280615	1122.54668	-0.99538	-0.00055968	0.27775	0.00015617	-0.71763	-0.00040351	562.2805816510804	39.074	0.55989	39.043	38.762	39.322	-0.03027	0.096187	-6.9971E-05	NaN	40.573	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95068			65523	11073	43539	43557							-0.009695293441836839
WCMPHPKKP	9	Unmodified	_WCMPHPKKP_					0	0	0		ENST00000513638.5_1_1:89876036-89886759:+|nuORF;ENST00000394662.2_1_1:89876036-89887275:+|nuORF	ENST00000513638.5_1_1:89876036-89886759:+|nuORF	ENST00000513638.5_1_1:89876036-89886759:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	562.280615	1122.54668	-0.89112	-0.00050106	0.41608	0.00023395	-0.47504	-0.00026711	562.2805879654039	38.954	0.471	38.907	38.647	39.118	-0.047001	-0.040613	8.5592E-05	NaN	40.573	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84782			65524	11073	43539	43557							-0.009695293441836839
WCRRQTRRRRW	11	Unmodified	_WCRRQTRRRRW_					0	0	0			REV__ENST00000447310.5_1_19:58067715-58071064:-|nuORF	REV__ENST00000447310.5_1_19:58067715-58071064:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.9722290039062	3	553.971042	1658.8913	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.55	1	77.687	77.187	78.187	0.13667								0	0	0	0.56276	1	7289	7289		5.4129	1.7939	1		+		65525	26818	43540	43558	74401	74401					0.08820722847622164
WCRRQTRRRRW	11	Unmodified	_WCRRQTRRRRW_					0	0	0			REV__ENST00000447310.5_1_19:58067715-58071064:-|nuORF	REV__ENST00000447310.5_1_19:58067715-58071064:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	415.2844543457031	4	415.730101	1658.8913	1.1318	0.00047052	-3.4308	-0.0014263	-2.299	-0.00095576	415.72856577601516	24.369	1.296	23.987	23.533	24.829	-0.38178					86	28	4	0	0	0	0.18408	1	1241	1241		0.3405	0	1	295330	+		65526	26818	43540	43558	74402	74402					0.08820722847622164
WCSSSFWWT	9	Unmodified	_WCSSSFWWT_					0	0	0		ENST00000537112.5_1_16:16421763-16427707:+|nuORF	ENST00000537112.5_1_16:16421763-16427707:+|nuORF	ENST00000537112.5_1_16:16421763-16427707:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	595.242919921875	2	595.242209	1188.46987	0.8453	0.00050316	-0.56653	-0.00033722	0.27877	0.00016594	595.2415956787161	64.558	0.56976	64.684	64.449	65.019	0.12545					37	17	3	0	0	0	0.74721	1	5688	5688		37.159	2.9866	1	353160			65527	13449	43541	43559	74403	74403					-0.11683049359658071
WDLMDQAQSN	10	Unmodified	_WDLMDQAQSN_					0	0	0			REV__nc|ENSG00000204852|Q2MV58-5|TCTN1	REV__nc|ENSG00000204852|Q2MV58-5|TCTN1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3662719726562	2	604.256045	1206.49754	3.207	0.0019378	-2.148	-0.0012979	1.059	0.00063989	604.2562201931788	104.69	0.82098	104.65	104.37	105.19	-0.04039					29	19	2	0	0	0	0.37624	1	11534	11534		33.922	2.2874	1	69965	+		65528	23524	43542	43560	74404	74404					-0.09745190890066624
WDSWCQQSY	9	Unmodified	_WDSWCQQSY_					0	0	0		ENST00000547379.5_1_12:60048968-60098558:+|nuORF;ENST00000552432.5_1_12:60048968-60098749:+|nuORF	ENST00000547379.5_1_12:60048968-60098558:+|nuORF	ENST00000547379.5_1_12:60048968-60098558:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.7333374023438	2	601.732206	1201.44986	0.17039	0.00010253	2.485	0.0014953	2.6554	0.0015979	601.7332177134743	28.057	0.49785	28.018	27.757	28.255	-0.039057					21	10	3	0	0	0	0.76764	1	1390	1390		34.173	0.65696	1	42021			65529	13605	43543	43561	74405	74405					-0.14280845090252114
WDTVPPVSESK	11	Unmodified	_WDTVPPVSESK_					0	0	0			REV__nc|ENSG00000172270|P35613-3|BSG	REV__nc|ENSG00000172270|P35613-3|BSG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.8146362304688	2	622.81151	1243.60847	0.7619	0.00047452	3.2004	0.0019932	3.9623	0.0024678	622.81338251894	87.804	0.77916	88.253	87.934	88.713	0.44893					54	18	4	0	0	0	0.72106	1	10337	10337		28.081	1.3886	1	1509600	+		65530	21816	43544	43562	74406	74406					-0.003592279103486362
WDYDRYTYT	9	Unmodified	_WDYDRYTYT_					0	0	0			REV__ENSG00000134817|ENST00000606794|APLNR	REV__ENSG00000134817|ENST00000606794|APLNR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2615661621094	3	428.184016	1281.53022	2.6371	0.0011292	-1.8146	-0.00077696	0.82254	0.0003522	428.5178791883901	90.702	0.51161	90.748	90.474	90.986	0.04644					19	12	3	0	0	0	0.20789	1	9389	9389		29.17	15.084	1	122430	+		65531	19169	43545	43563	74407	74407					-0.09928660495552322
WEAQEPIQM	9	Oxidation (M)	_WEAQEPIQM(Oxidation (M))_		WEAQEPIQM(1)		WEAQEPIQM(67)	0	0	1		ENSG00000231389|ENST00000419277|HLA-DPA1	ENSG00000231389|ENST00000419277|HLA-DPA1	ENSG00000231389|ENST00000419277|HLA-DPA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	574.256591796875	2	574.258056	1146.50156	-0.14504	-8.3289E-05	0.8531	0.0004899	0.70806	0.00040661	574.2579451741747	55.195	0.75224	55.596	55.28	56.033	0.40102					43	17	3	0	0	0	0.26953	1	5648	5648		67.494	11.06	1	678630			65532	8734	43546	43564	74408	74408		155			-0.06583101396381608
WEAQEPIQM	9	Oxidation (M)	_WEAQEPIQM(Oxidation (M))_		WEAQEPIQM(1)		WEAQEPIQM(48)	0	0	1		ENSG00000231389|ENST00000419277|HLA-DPA1	ENSG00000231389|ENST00000419277|HLA-DPA1	ENSG00000231389|ENST00000419277|HLA-DPA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.2578125	2	574.258056	1146.50156	-0.073211	-4.2042E-05	0.15591	8.953E-05	0.082695	4.7488E-05	574.2578899615445	55.042	0.71378	55.61	55.278	55.992	0.56836					28	16	2	0	0	0	0.58063	1	5642	5642		47.96	7.9014	1	946350			65533	8734	43546	43564	74409	74409		155			-0.06583101396381608
WEEKPINTAL	10	Unmodified	_WEEKPINTAL_					0	0	0		ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;ENSG00000136861|ENST00000349780|CDK5RAP2	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	600.8211059570312	2	600.816596	1199.61864	-0.53437	-0.00032106	0.38523	0.00023145	-0.14915	-8.9609E-05	600.8168393105065	54.288	0.66812	54.873	54.459	55.127	0.58474					23	15	2	0	0	0	0.51401	1	5542	5542		54.722	9.7001	1	361320			65534	4145	43547	43565	74410	74410					0.026813798149305512
WEEKPINTAL	10	Unmodified	_WEEKPINTAL_					0	0	0		ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;ENSG00000136861|ENST00000349780|CDK5RAP2	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	600.816596	1199.61864	1.0713	0.00064363	-1.3657	-0.00082053	-0.29445	-0.00017691	600.8159305819811	54.481	0.54472	54.888	54.615	55.16	0.40663	0.0075345	-0.0011138	NaN	54.722	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	350150			65535	4145	43547	43565							0.026813798149305512
WEGGSWWSCD	10	Unmodified	_WEGGSWWSCD_					0	0	0		ENST00000528718.5_1_8:145538587-145538704:-|nuORF	ENST00000528718.5_1_8:145538587-145538704:-|nuORF	ENST00000528718.5_1_8:145538587-145538704:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	606.7224731445312	2	606.724381	1211.43421	-0.34871	-0.00021157	-0.054305	-3.2948E-05	-0.40301	-0.00024452	606.7242955473042	23.543	1.0674	23.494	22.836	23.904	-0.049601					75	38	3	0	0	0	0.85466	1	773	773		20.947	5.3051	1	113140			65536	13309	43548	43566	74411	74411					-0.16305131607327894
WEGQGHLP	8	Unmodified	_WEGQGHLP_					0	0	0		ENST00000406563.6_2_6:41652238-41652334:-|nuORF	ENST00000406563.6_2_6:41652238-41652334:-|nuORF	ENST00000406563.6_2_6:41652238-41652334:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	462.7236022949219	2	462.222134	922.429715	-1.6716	-0.00077267	1.8401	0.00085052	0.16842	7.7847E-05	462.22289299060606	37.532	0.88529	37.543	37.195	38.08	0.011173					30	19	2	0	0	0	0.91005	1	2522	2522		42.474	8.9589	1	89899			65537	11273	43549	43567	74412	74412					-0.034602279679234016
WEGQGHLP	8	Unmodified	_WEGQGHLP_					0	0	0		ENST00000406563.6_2_6:41652238-41652334:-|nuORF	ENST00000406563.6_2_6:41652238-41652334:-|nuORF	ENST00000406563.6_2_6:41652238-41652334:-|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	462.222134	922.429715	-1.0019	-0.00046312	1.3769	0.00063645	0.37499	0.00017333	462.2226864843161	37.568	0.79898	37.518	37.184	37.983	-0.050369	-0.01259	-0.00025517	NaN	42.474	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93014			65538	11273	43549	43567							-0.034602279679234016
WELVLRRGY	9	Unmodified	_WELVLRRGY_					0	0	0			REV__ENSG00000122965|ENST00000261741|RBM19	REV__ENSG00000122965|ENST00000261741|RBM19	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	596.3327026367188	2	596.33529	1190.65603	-0.50602	-0.00030176	-3.6738	-0.0021908	-4.1798	-0.0024926	596.3330350559576	96.092	3.5475	96.14	95.129	98.677	0.047417					266	82	5	0	0	0	0.77546	1	10141	10141		31.955	3.8734	1	1259900	+		65539	18520	43550	43568	74413	74413					0.06832515871178657
WEMEEDQGEE	10	Unmodified	_WEMEEDQGEE_					0	0	0		chr19:50724601-50724973|53|13.08|0.15|6.48|+|ENST00000599973|CLEC11A,CLEC11A;ENSG00000105472|ENST00000250340|CLEC11A	chr19:50724601-50724973|53|13.08|0.15|6.48|+|ENST00000599973|CLEC11A,CLEC11A	chr19:50724601-50724973|53|13.08|0.15|6.48|+|ENST00000599973|CLEC11A,CLEC11A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3584594726562	2	641.232432	1280.45031	3.3355	0.0021388	2.3727	0.0015215	5.7082	0.0036603	641.2338678527381	99.776	0.4841	100.14	99.837	100.32	0.36292					22	11	3	0	0	0	0.37624	1	12057	12057		39.253	25.799	1	154780			65540	291	43551	43569	74414	74414					-0.17869514951712517
WEPAPPRPVF	10	Unmodified	_WEPAPPRPVF_					0	0	0		ENST00000414656.1_1_9:139700878-139703284:-|nuORF	ENST00000414656.1_1_9:139700878-139703284:-|nuORF	ENST00000414656.1_1_9:139700878-139703284:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	598.8157348632812	2	598.316566	1194.61858	-1.6469	-0.00098536	1.1168	0.00066822	-0.53005	-0.00031714	598.3170815380768	69.966	0.56753	70.001	69.832	70.399	0.035614					57	26	3	0	0	0	0.71042	1	6715	6715		44.117	0	1	753790			65541	11370	43552	43570	74415	74415					0.029054246055238764
WEPGLRQALQ	10	Unmodified	_WEPGLRQALQ_					0	0	0			REV__ENSG00000169372|ENST00000332896|CRADD	REV__ENSG00000169372|ENST00000332896|CRADD	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.8272094726562	2	599.32238	1196.63021	0.5273	0.00031602	-0.38836	-0.00023275	0.13895	8.3273E-05	599.3217465646096	59.463	0.68615	59.577	59.217	59.903	0.11396					33	19	2	0	0	0	0.54701	1	5124	5124		52.937	3.4007	1	238140	+		65542	21575	43553	43571	74416	74416					0.03975621628887893
WEPSPTAHSH	10	Unmodified	_WEPSPTAHSH_					0	0	0		ENST00000600199.1_1_19:50270291-50299453:+|nuORF	ENST00000600199.1_1_19:50270291-50299453:+|nuORF	ENST00000600199.1_1_19:50270291-50299453:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	574.7613525390625	2	574.759612	1147.50467	0.26233	0.00015078	3.0968	0.0017799	3.3592	0.0019307	574.7611892376287	57.675	0.70835	58.23	57.848	58.557	0.55513					41	16	3	0	0	0	0.6116	1	6026	6026		49.442	3.4693	1	1607400			65543	14379	43554	43572	74417	74417					-0.063180902273416
WEPTDEPWSE	10	Unmodified	_WEPTDEPWSE_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	638.2606201171875	2	638.26185	1274.50915	-0.29465	-0.00018807	-2.0182	-0.0012881	-2.3128	-0.0014762	638.2604750318156	81.882	0.60325	81.882	81.616	82.22	0					47	16	4	0	0	0	0.85934	1	7634	7634		35.618	1.4457	1	334960			65544	2871	43555	43573	74418	74418					-0.11712670595102281
WEPTDEPWSE	10	Unmodified	_WEPTDEPWSE_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	638.2608642578125	2	638.26185	1274.50915	0.41439	0.00026449	-2.6715	-0.0017051	-2.2571	-0.0014406	638.2599227578283	81.848	0.72321	81.785	81.473	82.196	-0.062935					44	16	3	0	0	0	0.71042	1	8268	8268		44.117	1.2525	1	590340			65545	2871	43555	43573	74419	74419					-0.11712670595102281
WEPTDEPWSE	10	Unmodified	_WEPTDEPWSE_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	638.2600708007812	2	638.26185	1274.50915	1.5131	0.00096578	-3.7915	-0.00242	-2.2783	-0.0014542	638.2592203537731	81.621	0.76257	81.766	81.405	82.168	0.14512					40	17	3	0	0	0	0.6116	1	7829	7829		49.442	3.4896	1	445850			65546	2871	43555	43573	74420	74420					-0.11712670595102281
WEPWSCAPNEG	11	Unmodified	_WEPWSCAPNEG_					0	0	0			REV__ENST00000563040.5_1_16:30010608-30010776:+|nuORF	REV__ENST00000563040.5_1_16:30010608-30010776:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	638.2595825195312	2	638.258588	1274.50262	-0.093363	-5.959E-05	2.8355	0.0018098	2.7422	0.0017502	638.2603353230929	81.805	0.77465	81.869	81.532	82.306	0.064384					49	17	4	0	0	0	0.62614	2	8043	8043;8065		41.427	5.8083	1	585460	+		65547	28812	43556	43574	74421;74422	74421					-0.12364887027456462
WEQYLLKRDNM	11	Unmodified	_WEQYLLKRDNM_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	499.2491455078125	3	499.250254	1494.72893	-0.72196	-0.00036044	1.6944	0.00084592	0.97242	0.00048548	499.2509582793171	47.122	0.63241	47.095	46.766	47.398	-0.026737					33	16	3	0	0	0	0.77511	1	3920	3920		16.53	0	1	193140	+		65548	16355	43557	43575	74423	74423					0.0013585681163021945
WERKYREWYEK	11	Unmodified	_WERKYREWYEK_					0	0	0		nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	418.6037292480469	4	418.96122	1671.81578	-1.7409	-0.00072936	-2.3679	-0.00099208	-4.1088	-0.0017214	419.2113560170025	49.683	0.266	49.683	49.483	49.749	0					6	5	2	0	0	0	0.18304	1	3933	3933		3.4087	0	1	31015			65549	3217	43558	43576	74424	74424					0.006739793577253295
WERPTKVRLPK	11	Unmodified	_WERPTKVRLPK_					0	0	0		nc|ENSG00000167711|P08697-2|SERPINF2;ENSG00000167711|ENST00000453066|SERPINF2	nc|ENSG00000167711|P08697-2|SERPINF2	nc|ENSG00000167711|P08697-2|SERPINF2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	471.28741455078125	3	470.617377	1408.8303	0.559	0.00026307	3.9469	0.0018575	4.5059	0.0021206	470.6191947461516	23.022	0.52451	22.603	22.367	22.891	-0.41879					21	12	2	0	0	0	0.17705	1	953	953		32.034	12.771	1	64626			65550	6320	43559	43577	74425	74425					0.14224096296493371
WERPTKVRLPK	11	Unmodified	_WERPTKVRLPK_					0	0	0		nc|ENSG00000167711|P08697-2|SERPINF2;ENSG00000167711|ENST00000453066|SERPINF2	nc|ENSG00000167711|P08697-2|SERPINF2	nc|ENSG00000167711|P08697-2|SERPINF2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	470.617377	1408.8303	0.032481	1.5286E-05	4.8004	0.0022592	4.8329	0.0022745	470.6194995972841	22.981	0.46308	22.407	22.157	22.62	-0.57415	-0.098185	0.00072188	NaN	32.034	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78225			65551	6320	43559	43577							0.14224096296493371
WERQKKEFLWR	11	Unmodified	_WERQKKEFLWR_					0	0	0		nc|ENSG00000168502|Q9Y4B5-4|MTCL1;nc|ENSG00000168502|Q9Y4B5-2|MTCL1;nc|ENSG00000168502|Q9Y4B5-3|MTCL1;nc|ENSG00000168502|Q9Y4B5|MTCL1;ENSG00000168502|ENST00000695636|MTCL1	nc|ENSG00000168502|Q9Y4B5-4|MTCL1	nc|ENSG00000168502|Q9Y4B5-4|MTCL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.7647094726562	3	535.959803	1604.85758	-0.20847	-0.00011173	-0.79671	-0.000427	-1.0052	-0.00053874	535.9595554051199	32.227	0.43097	32.353	32.203	32.634	0.12643					15	9	2	0	0	0	0.18129	1	2230	2230		14.779	11.37	1	179300			65552	6407	43560	43578	74426	74426					0.07934579836864941
WERQKKEFLWR	11	Unmodified	_WERQKKEFLWR_					0	0	0		nc|ENSG00000168502|Q9Y4B5-4|MTCL1;nc|ENSG00000168502|Q9Y4B5-2|MTCL1;nc|ENSG00000168502|Q9Y4B5-3|MTCL1;nc|ENSG00000168502|Q9Y4B5|MTCL1;ENSG00000168502|ENST00000695636|MTCL1	nc|ENSG00000168502|Q9Y4B5-4|MTCL1	nc|ENSG00000168502|Q9Y4B5-4|MTCL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.9577026367188	3	535.959803	1604.85758	-2.0459	-0.0010965	-1.867	-0.0010006	-3.9129	-0.0020972	535.9587639371827	41.984	0.99572	42.681	42.344	43.339	0.69754					63	24	4	0	0	0	0.76892	1	3730	3730		17.833	3.7471	1	1892600			65553	6407	43560	43578	74427	74427					0.07934579836864941
WERWRWPWCAR	11	Unmodified	_WERWRWPWCAR_					0	0	0			REV__ENST00000589087.5_1_19:2806818-2807876:+|nuORF	REV__ENST00000589087.5_1_19:2806818-2807876:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.5972290039062	3	544.598211	1630.7728	0.44754	0.00024373	-1.4471	-0.0007881	-0.99959	-0.00054437	544.9317423239131	18.133	0.53688	18.056	17.826	18.363	-0.07671					40	17	3	0	0	0	0.81021	1	273	273		9.2118	0.41249	1	79851	+		65554	29155	43561	43579	74428	74428					-0.017350691807223484
WERWRWPWCAR	11	Unmodified	_WERWRWPWCAR_					0	0	0			REV__ENST00000589087.5_1_19:2806818-2807876:+|nuORF	REV__ENST00000589087.5_1_19:2806818-2807876:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	409.2913818359375	4	408.700478	1630.7728	0.4618	0.00018874	-2.9541	-0.0012074	-2.4924	-0.0010186	408.69983771214	18.753	0.37164	18.729	18.547	18.919	-0.024035					30	16	3	0	0	0	0.18386	1	378	378		3.026	0	1	198430	+		65555	29155	43561	43579	74429	74429					-0.017350691807223484
WFAGKYSLACN	11	Unmodified	_WFAGKYSLACN_					0	0	0			REV__nc|ENSG00000041982|P24821-3|TNC	REV__nc|ENSG00000041982|P24821-3|TNC	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.2919311523438	2	630.297516	1258.58048	1.2871	0.00081123	-2.1773	-0.0013724	-0.89029	-0.00056115	630.2960473873329	23.81	0.6923	23.863	23.602	24.294	0.05291					51	30	2	0	0	0	0.732	1	768	768		26.063	0.48933	1	159760	+		65556	16324	43562	43580	74430	74430					-0.038468293714004176
WFEFFFFLRWN	11	Unmodified	_WFEFFFFLRWN_					0	0	0		ENST00000324348.8_2_17:7818314-7818512:-|nuORF	ENST00000324348.8_2_17:7818314-7818512:-|nuORF	ENST00000324348.8_2_17:7818314-7818512:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	547.268310546875	3	546.934595	1637.78196	-0.19964	-0.00010919	-4.2039	-0.0022993	-4.4035	-0.0024084	546.9321505867332	38.649	0.47303	38.622	38.336	38.809	-0.027843					22	10	3	0	0	0	0.85439	1	2638	2638		5.6988	2.0797	1	77176			65557	10059	43563	43581	74431	74431					-0.011423973433920764
WFELPQAQEL	10	Unmodified	_WFELPQAQEL_					0	0	0		ENSG00000266714|ENST00000645453|MYO15B	ENSG00000266714|ENST00000645453|MYO15B	ENSG00000266714|ENST00000645453|MYO15B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	630.8175048828125	2	630.816596	1259.61864	-0.12683	-8.0004E-05	2.7593	0.0017406	2.6324	0.0016606	630.8185960153266	64.071	0.52621	64.037	63.773	64.299	-0.034256					27	14	3	0	0	0	0.44803	2	6088	6088;6100		60.118	17.254	1	128550			65558	8953	43564	43582	74432;74433	74432					-0.0007862018510422786
WFELPQAQEL	10	Unmodified	_WFELPQAQEL_					0	0	0		ENSG00000266714|ENST00000645453|MYO15B	ENSG00000266714|ENST00000645453|MYO15B	ENSG00000266714|ENST00000645453|MYO15B	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	630.816596	1259.61864	-0.18345	-0.00011572	2.3331	0.0014718	2.1496	0.001356	630.8184918587338	64.221	0.48055	64.22	63.924	64.404	-0.00078583	0.14253	-6.2187E-05	NaN	60.118	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118810			65559	8953	43564	43582							-0.0007862018510422786
WFELPQAQEL	10	Unmodified	_WFELPQAQEL_					0	0	0		ENSG00000266714|ENST00000645453|MYO15B	ENSG00000266714|ENST00000645453|MYO15B	ENSG00000266714|ENST00000645453|MYO15B	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	630.816596	1259.61864	-0.46369	-0.00029251	1.8626	0.001175	1.3989	0.00088248	630.8185435190518	63.949	0.7281	63.976	63.711	64.439	0.027142	-0.10155	-0.00065573	NaN	60.118	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	131030			65560	8953	43564	43582							-0.0007862018510422786
WFGNNKRW	8	Unmodified	_WFGNNKRW_					0	0	0			REV__ENST00000519732.5_1_17:67144970-67171813:-|nuORF	REV__ENST00000519732.5_1_17:67144970-67171813:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7796020507812	2	554.277775	1106.541	0.34287	0.00019005	-1.2117	-0.00067162	-0.86883	-0.00048157	554.2768611012594	64.056	0.53665	64.021	63.8	64.337	-0.034248					25	14	2	0	0	0	0.52826	1	6114	6114		74.517	7.5547	1	265730	+		65561	20378	43565	43583	74434	74434					-0.008011685399424096
WFHKYPPPYKR	11	Unmodified	_WFHKYPPPYKR_					0	0	0			REV__nc|ENSG00000143569|Q14157-4|UBAP2L	REV__nc|ENSG00000143569|Q14157-4|UBAP2L	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	506.2901611328125	3	506.93834	1517.79319	0.86253	0.00043725	2.6277	0.0013321	3.4902	0.0017693	507.27411981340236	84.03	0.29229	84.485	84.232	84.524	0.45555					10	6	2	0	0	0	0.181	1	9782	9782		9.2118	0	1	104630	+		65562	29903	43566	43584	74435	74435					0.05500424750721322
WFIIRVDVTM	10	Unmodified	_WFIIRVDVTM_					0	0	0		chr14:58346505-58347647|47|11.43|0.6|4.25|+|1|ARID4A,ARID4A|1	chr14:58346505-58347647|47|11.43|0.6|4.25|+|1|ARID4A,ARID4A|1	chr14:58346505-58347647|47|11.43|0.6|4.25|+|1|ARID4A,ARID4A|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.34716796875	2	640.347009	1278.67946	0.93986	0.00060184	-1.8627	-0.0011928	-0.92282	-0.00059092	640.3460312358319	102.96	0.59602	103.09	102.81	103.4	0.12622					50	14	5	0	0	0	0.3985	1	10866	10866		64.207	5.9773	1	4886000			65563	172	43567	43585	74436	74436					0.051271935934664725
WFKIWPEFLII	11	Unmodified	_WFKIWPEFLII_					0	0	0			REV__nc|ENSG00000182489|Q6PP77-2|XKRX	REV__nc|ENSG00000182489|Q6PP77-2|XKRX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.95123291015625	3	497.951475	1490.83259	-0.23329	-0.00011617	-0.62425	-0.00031085	-0.85754	-0.00042701	497.9511036347425	24.221	1.0288	24.175	23.523	24.551	-0.04598					53	23	4	0	0	0	0.78683	1	907	907		14.086	0.57807	1	99074	+		65564	22526	43568	43586	74437	74437					0.10681131981618819
WFLGNFGS	8	Unmodified	_WFLGNFGS_					0	0	0			REV__nc|ENSG00000256553|A0A0B4J238|TRAV1-2	REV__nc|ENSG00000256553|A0A0B4J238|TRAV1-2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	464.219970703125	2	464.221603	926.428653	-0.079537	-3.6923E-05	-3.6947	-0.0017152	-3.7742	-0.0017521	464.21962742556576	35.895	0.59426	35.88	35.514	36.108	-0.015583					29	12	3	0	0	0	0.9295	1	2256	2256		55.504	2.1528	1	87563	+		65565	30244	43569	43587	74438	74438					-0.03750442336809101
WFLVTQLHH	9	Unmodified	_WFLVTQLHH_					0	0	0			REV__ENSG00000173212|ENST00000369500|MAB21L3	REV__ENSG00000173212|ENST00000369500|MAB21L3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	590.814453125	2	590.816733	1179.61891	-0.28466	-0.00016818	-3.2871	-0.001942	-3.5717	-0.0021102	590.8149062550153	30.114	0.44208	30.139	29.972	30.414	0.025013					17	10	2	0	0	0	0.76996	1	1541	1541		33.516	3.1979	1	34748	+		65566	21902	43570	43588	74439	74439					0.03628844325407954
WFQNRRMKWKR	11	Unmodified	_WFQNRRMKWKR_					0	0	0		nc|ENSG00000005102|P50221-3|MEOX1;chr17:43661393-43661871|39|15.46|0.6|4.68|-|ENST00000393661|MEOX1,MEOX1;ENSG00000005102|ENST00000318579|MEOX1;ENSG00000106511|ENST00000262041|MEOX2;nc|ENSG00000130675|P50219-2|MNX1;ENSG00000130675|ENST00000252971|MNX1	nc|ENSG00000005102|P50221-3|MEOX1	nc|ENSG00000005102|P50221-3|MEOX1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	546.2992553710938	3	545.964894	1634.87285	0.034924	1.9067E-05	4.46	0.002435	4.495	0.0024541	545.9672202936925	16.594	0.23901	16.642	16.528	16.767	0.047804					22	9	3	0	0	0	0.88596	1	173	173		3.6191	0.21035	1	92442			65567	229	43571	43589	74440	74440					0.0808116815305766
WFQNRRMKWKR	11	Unmodified	_WFQNRRMKWKR_					0	0	0		nc|ENSG00000005102|P50221-3|MEOX1;chr17:43661393-43661871|39|15.46|0.6|4.68|-|ENST00000393661|MEOX1,MEOX1;ENSG00000005102|ENST00000318579|MEOX1;ENSG00000106511|ENST00000262041|MEOX2;nc|ENSG00000130675|P50219-2|MNX1;ENSG00000130675|ENST00000252971|MNX1	nc|ENSG00000005102|P50221-3|MEOX1	nc|ENSG00000005102|P50221-3|MEOX1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	545.964894	1634.87285	0.12611	6.8854E-05	3.8008	0.0020751	3.927	0.002144	545.9670080744831	16.599	0.20818	16.659	16.503	16.711	0.059269	0.013846	-0.00048318	NaN	3.6191	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108460			65568	229	43571	43589							0.0808116815305766
WFQNRRMKWKR	11	Unmodified	_WFQNRRMKWKR_					0	0	0		nc|ENSG00000005102|P50221-3|MEOX1;chr17:43661393-43661871|39|15.46|0.6|4.68|-|ENST00000393661|MEOX1,MEOX1;ENSG00000005102|ENST00000318579|MEOX1;ENSG00000106511|ENST00000262041|MEOX2;nc|ENSG00000130675|P50219-2|MNX1;ENSG00000130675|ENST00000252971|MNX1	nc|ENSG00000005102|P50221-3|MEOX1	nc|ENSG00000005102|P50221-3|MEOX1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	545.964894	1634.87285	0.91956	0.00050205	3.745	0.0020446	4.6646	0.0025467	545.9668508931468	16.658	0.20657	16.634	16.55	16.757	-0.024035	-0.011141	-0.00057464	NaN	3.6191	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73354			65569	229	43571	43589							0.0808116815305766
WFRRALKYILL	11	Unmodified	_WFRRALKYILL_					0	0	0		nc|ENSG00000146378|Q9P1P5-2|TAAR2;ENSG00000146378|ENST00000367931|TAAR2	nc|ENSG00000146378|Q9P1P5-2|TAAR2	nc|ENSG00000146378|Q9P1P5-2|TAAR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	493.6405944824219	3	493.638001	1477.89217	-0.27359	-0.00013505	2.2456	0.0011085	1.972	0.00097344	493.6389567755731	15.877	0.18458	15.797	15.705	15.889	-0.080017					18	8	3	0	0	0	0.78391	1	63	63		14.694	8.0341	1	62522			65570	4839	43572	43590	74441	74441					0.1723444771564573
WFRRALKYILL	11	Unmodified	_WFRRALKYILL_					0	0	0		nc|ENSG00000146378|Q9P1P5-2|TAAR2;ENSG00000146378|ENST00000367931|TAAR2	nc|ENSG00000146378|Q9P1P5-2|TAAR2	nc|ENSG00000146378|Q9P1P5-2|TAAR2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	493.638001	1477.89217	-0.74021	-0.0003654	2.4869	0.0012276	1.7467	0.00086224	493.6390471363549	15.609	0.11426	15.658	15.59	15.705	0.048306	-0.066604	-0.0002641	NaN	14.694	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38653			65571	4839	43572	43590							0.1723444771564573
WFTNSWVLK	9	Unmodified	_WFTNSWVLK_					0	0	0		ENSG00000162621|ENST00000294635|LRRC53	ENSG00000162621|ENST00000294635|LRRC53	ENSG00000162621|ENST00000294635|LRRC53	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	590.8095703125	2	590.811116	1179.60768	-0.8677	-0.00051265	-2.9831	-0.0017625	-3.8508	-0.0022751	590.8092605790742	59.99	1.6283	59.99	59.57	61.199	0					167	67	3	0	0	0	0.18601	2	5287	5287;5295		76.774	6.7614	1	3570000			65572	5708	43573	43591	74442;74443	74442					0.02506022231273164
WFTNSWVLK	9	Unmodified	_WFTNSWVLK_					0	0	0		ENSG00000162621|ENST00000294635|LRRC53	ENSG00000162621|ENST00000294635|LRRC53	ENSG00000162621|ENST00000294635|LRRC53	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	590.8093872070312	2	590.811116	1179.60768	-2.5816	-0.0015252	-1.2426	-0.00073412	-3.8241	-0.0022593	590.810388094793	59.822	1.6947	59.855	59.336	61.031	0.032822					113	47	3	0	0	0	0.19818	1	5586	5586		74.255	0.28031	1	6301700			65573	5708	43573	43591	74444	74444					0.02506022231273164
WFTNSWVLK	9	Unmodified	_WFTNSWVLK_					0	0	0		ENSG00000162621|ENST00000294635|LRRC53	ENSG00000162621|ENST00000294635|LRRC53	ENSG00000162621|ENST00000294635|LRRC53	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	590.808837890625	2	590.811116	1179.60768	0.77133	0.00045571	-4.3721	-0.0025831	-3.6008	-0.0021274	590.8085136634772	59.814	1.2746	59.908	59.359	60.634	0.094063					111	41	3	0	0	0	0.41566	1	5196	5196		56.721	0.28726	1	4884800			65574	5708	43573	43591	74445	74445					0.02506022231273164
WFTNSWVLK	9	Unmodified	_WFTNSWVLK_					0	0	0		ENSG00000162621|ENST00000294635|LRRC53	ENSG00000162621|ENST00000294635|LRRC53	ENSG00000162621|ENST00000294635|LRRC53	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.809326171875	2	590.811116	1179.60768	-1.4475	-0.00085521	-2.175	-0.001285	-3.6225	-0.0021402	590.8098678631684	57.766	1.8735	58.16	57.738	59.612	0.39408					109	45	3	0	0	0	0.21969	1	5992	5992		71.877	5.4482	1	12390000			65575	5708	43573	43591	74446	74446					0.02506022231273164
WFTNSWVLK	9	Unmodified	_WFTNSWVLK_					0	0	0		ENSG00000162621|ENST00000294635|LRRC53	ENSG00000162621|ENST00000294635|LRRC53	ENSG00000162621|ENST00000294635|LRRC53	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	590.8094482421875	2	590.811116	1179.60768	0.42073	0.00024857	-3.942	-0.002329	-3.5213	-0.0020804	590.8087931973557	57.669	1.7305	58.224	57.808	59.538	0.55513					104	42	3	0	0	0	0.11055	2	6060	6048;6060		90.37	2.6734	1	12960000			65576	5708	43573	43591	74447;74448	74448					0.02506022231273164
WFVVLKKL	8	Unmodified	_WFVVLKKL_					0	0	0		ENST00000298786.4_2_10:88911586-88911679:+|nuORF	ENST00000298786.4_2_10:88911586-88911679:+|nuORF	ENST00000298786.4_2_10:88911586-88911679:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.2642822265625	2	516.833863	1031.65317	-0.84781	-0.00043818	-3.2433	-0.0016762	-4.0911	-0.0021144	516.8319054099125	44.966	0.77589	45.81	45.461	46.236	0.84438					28	18	2	0	0	0	0.4196	1	4190	4190		44.531	20.012	1	291310			65577	9774	43574	43592	74449	74449					0.1386129248433008
WFYRRFLCFER	11	Unmodified	_WFYRRFLCFER_					0	0	0		ENST00000486256.5_1_7:6791019-6791091:+|nuORF	ENST00000486256.5_1_7:6791019-6791091:+|nuORF	ENST00000486256.5_1_7:6791019-6791091:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	541.6085205078125	3	541.606484	1621.79762	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.28	1	27.389	26.889	27.889	0.10901								0	0	0	0.56276	1	1081	1081		5.4129	0.76959	1				65578	12578	43575	43593	74450	74450					0.011595659019803861
WGAAIAEWDSV	11	Unmodified	_WGAAIAEWDSV_					0	0	0		ENST00000157600.7_2_3:8612384-8612732:+|nuORF	ENST00000157600.7_2_3:8612384-8612732:+|nuORF	ENST00000157600.7_2_3:8612384-8612732:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.7850952148438	2	602.785296	1203.55604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.909	1	50.886	50.386	51.386	-0.02343								0	0	0	0.56276	1	4430	4430		25.574	3.6142	1				65579	9080	43576	43594	74451	74451					-0.037597662533016774
WGAVARVF	8	Unmodified	_WGAVARVF_					0	0	0			REV__ENSG00000132153|ENST00000445061|DHX30	REV__ENSG00000132153|ENST00000445061|DHX30	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2762451171875	2	453.253237	904.491922	-0.5922	-0.00026842	1.0767	0.00048801	0.48448	0.00021959	453.2534911468522	51.089	0.74507	51.524	51.077	51.822	0.43505					25	17	2	0	0	0	0.4196	1	5019	5019		21.702	4.3374	1	122710	+		65580	18984	43577	43595	74452	74452					0.03585543171084282
WGDFGVEAVSE	11	Unmodified	_WGDFGVEAVSE_					0	0	0		nc|ENSG00000108465|Q96JB5-3|CDK5RAP3;nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;ENSG00000108465|ENST00000338399|CDK5RAP3;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3	nc|ENSG00000108465|Q96JB5-3|CDK5RAP3	nc|ENSG00000108465|Q96JB5-3|CDK5RAP3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	598.267578125	2	598.266936	1194.51932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.453	1	30.451	29.951	30.951	-0.0022526								0	0	0	0.56276	1	1343	1343		25.574	1.0549	1				65581	2407	43578	43596	74453	74453					-0.07016062869865891
WGGAHIFEL	9	Unmodified	_WGGAHIFEL_					0	0	0		ENSG00000165794|ENST00000298681|SLC39A2	ENSG00000165794|ENST00000298681|SLC39A2	ENSG00000165794|ENST00000298681|SLC39A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.257080078125	2	515.261259	1028.50797	0.032082	1.6531E-05	-3.6888	-0.0019007	-3.6567	-0.0018842	515.2593049894326	30.893	0.80307	30.846	30.538	31.341	-0.047062					29	20	2	0	0	0	0.77546	1	1700	1700		31.955	5.1588	1	31227			65582	6123	43579	43597	74454	74454					-0.005147953826508456
WGHEKPVRLSA	11	Unmodified	_WGHEKPVRLSA_					0	0	0			REV__ENST00000306072.9_1_15:89182285-89182611:+|nuORF	REV__ENST00000306072.9_1_15:89182285-89182611:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3442993164062	2	640.348929	1278.6833	-0.067518	-4.3235E-05	-3.5801	-0.0022925	-3.6477	-0.0023358	640.346558921285	103.14	0.5662	103.15	102.88	103.44	0.0082016					46	13	4	0	0	0	0.69931	1	11107	11107		31.634	3.5528	1	2899800	+		65583	24828	43580	43598	74455	74455					0.05510999411580997
WGKRLLWAQG	10	Unmodified	_WGKRLLWAQG_					0	0	0		ENST00000519873.1_1_2:73493729-73493846:-|nuORF	ENST00000519873.1_1_2:73493729-73493846:-|nuORF	ENST00000519873.1_1_2:73493729-73493846:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5645446777344	3	405.564614	1213.67201	0.092234	3.7407E-05	0.18472	7.4915E-05	0.27695	0.00011232	405.5646064688323	59.947	1.8016	59.915	58.946	60.747	-0.031731					126	47	3	0	0	0	0.85466	1	5591	5591		14.694	0	1	288430			65584	13147	43581	43599	74456	74456					0.07372222108097048
WGKSWSCLF	9	Unmodified	_WGKSWSCLF_					0	0	0		ENST00000366718.5_1_1:228332177-228332423:+|nuORF	ENST00000366718.5_1_1:228332177-228332423:+|nuORF	ENST00000366718.5_1_1:228332177-228332423:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	557.2637329101562	2	557.262945	1112.51134	-0.13526	-7.5378E-05	2.6059	0.0014521	2.4706	0.0013768	557.2640769920239	79.122	0.63914	79.671	79.403	80.042	0.54945					35	14	3	0	0	0	0.25483	1	9098	9098		68.787	8.6686	1	577070			65585	10517	43582	43600	74457	74457					-0.040418686003249604
WGKVKKPPVQ	10	Unmodified	_WGKVKKPPVQ_					0	0	0			REV__ENST00000427977.6_1_1:151337413-151341586:-|nuORF	REV__ENST00000427977.6_1_1:151337413-151341586:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.7650146484375	2	583.855858	1165.69716	-0.15901	-9.2839E-05	-0.06786	-3.962E-05	-0.22687	-0.00013246	583.8557274080939	63.586	0.72309	64.14	63.879	64.602	0.55449					22	16	2	0	0	0	0.37624	1	6837	6837		19.997	3.2794	1	62478	+		65586	26576	43583	43601	74458	74458					0.1209427691064775
WGLAGQWCCSS	11	Unmodified	_WGLAGQWCCSS_					0	0	0			REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	599.2440185546875	2	599.244426	1196.4743	0.01478	8.8568E-06	-0.80642	-0.00048324	-0.79164	-0.00047439	599.2439285950039	27.246	0.33533	27.287	27.111	27.446	0.040834					23	12	3	0	0	0	0.72918	1	1218	1218		26.693	1.1189	1	47545	+		65587	27790	43584	43602	74459	74459					-0.11607908208407025
WGLISAPRL	9	Unmodified	_WGLISAPRL_					0	0	0			REV__ENST00000421814.6_1_5:162932622-162940637:+|nuORF	REV__ENST00000421814.6_1_5:162932622-162940637:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.799560546875	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.535	1	49.535	49.035	50.035	0								0	0	0	0.30416	1	3908	3908		29.15	1.2673	1		+		65588	26501	43585	43603	74460	74460					0.08122056922411502
WGLLPQRL	8	Unmodified	_WGLLPQRL_					0	0	0		ENST00000398058.5_1_21:45374496-45374712:+|nuORF	ENST00000398058.5_1_21:45374496-45374712:+|nuORF	ENST00000398058.5_1_21:45374496-45374712:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79559326171875	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.82464	1	4319	4319		21.702	0	1	1232600			65589	11171	43586	43604	74461	74461					0.08446074267999393
WGMPPGEG	8	Unmodified	_WGMPPGEG_					0	0	0		ENSG00000197037|ENST00000394152|ZSCAN25;nc|ENSG00000197037|Q6NSZ9-2|ZSCAN25	ENSG00000197037|ENST00000394152|ZSCAN25	ENSG00000197037|ENST00000394152|ZSCAN25	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.5608215332031	2	415.678714	829.342874	0.13533	5.6255E-05	-4.291	-0.0017837	-4.1556	-0.0017274	415.67695062242507	30.678	0.21769	30.682	30.535	30.753	0.0037212					6	4	2	0	0	0	0.4196	1	2021	2021		15.636	12.707	1	16294			65590	8126	43587	43605	74462	74462					-0.07862350513960337
WGPASHSP	8	Unmodified	_WGPASHSP_					0	0	0		ENST00000265734.8_1_7:92238119-92238206:-|nuORF	ENST00000265734.8_1_7:92238119-92238206:-|nuORF	ENST00000265734.8_1_7:92238119-92238206:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	419.7750549316406	2	419.695752	837.376952	-1.8644	-0.0007825	2.4188	0.0010151	0.55431	0.00023264	419.6966722992378	42.916	2.3065	42.922	41.786	44.093	0.0057526					80	61	2	0	0	0	0.4196	1	2956	2956		33.516	0	1	87850			65591	9511	43588	43606	74463	74463					-0.048241860307143725
WGRPVGPL	8	Unmodified	_WGRPVGPL_					0	0	0		ENSG00000180902|ENST00000321264|D2HGDH;nc|ENSG00000180902|Q8N465-2|D2HGDH;nc|ENSG00000180902|Q8N465-3|D2HGDH;ENST00000463932.1_1_2:242674639-242675412:+|nuORF	ENSG00000180902|ENST00000321264|D2HGDH	ENSG00000180902|ENST00000321264|D2HGDH	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	440.7662048339844	2	441.253237	880.491922	0.047888	2.1131E-05	0.2116	9.3371E-05	0.25949	0.0001145	441.2533329883856	35.831	0.50516	35.841	35.568	36.073	0.0092812					14	10	2	0	0	0	0.4196	1	2250	2250		19.36	11.129	1	15245			65592	7357	43589	43607	74464	74464					0.04689543171082278
WGRQWEVSR	9	Unmodified	_WGRQWEVSR_					0	0	0		ENST00000480424.6_1_16:630268-633631:+|nuORF	ENST00000480424.6_1_16:630268-633631:+|nuORF	ENST00000480424.6_1_16:630268-633631:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	602.3041381835938	2	602.304521	1202.59449	0.11958	7.2026E-05	-1.2287	-0.00074007	-1.1091	-0.00066804	602.3036475876663	75.05	1.0451	75.006	74.659	75.704	-0.043877					82	29	4	0	0	0	0.22631	1	7363	7363		71.296	5.8303	1	1186100			65593	12435	43590	43608	74465	74465					0.001295841718729207
WGRTRLPRTI	10	Unmodified	_WGRTRLPRTI_					0	0	0		ENSG00000128731|ENST00000261609|HERC2;ENST00000566635.5_1_15:28356911-28362639:-|nuORF	ENSG00000128731|ENST00000261609|HERC2;ENST00000566635.5_1_15:28356911-28362639:-|nuORF	ENSG00000128731|ENST00000261609|HERC2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.885009765625	2	628.372738	1254.73092	1.0295	0.00064689	4.1592	0.0026135	5.1887	0.0032604	628.8787638949404	112.82	0.33247	112.85	112.73	113.07	0.028854					11	8	2	0	0	0	0.37624	1	12328	12328		34.173	3.8548	1	808790			65594	3560;13939	43591	43609	74466	74466					0.11374698402391914
WGRWMCPFTQ	10	Unmodified	_WGRWMCPFTQ_					0	0	0			REV__ENST00000331772.8_1_10:90045168-90074247:-|nuORF	REV__ENST00000331772.8_1_10:90045168-90074247:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.7713623046875	3	437.863566	1310.56887	0.81075	0.000355	2.3681	0.0010369	3.1788	0.0013919	437.8649323986769	37.405	0.40617	37.89	37.619	38.025	0.48581					14	9	2	0	0	0	0.37624	1	3023	3023		23.378	0	1	67121	+		65595	25132	43592	43610	74467	74467					-0.07399349666388844
WGRWWFWLERR	11	Unmodified	_WGRWWFWLERR_					0	0	0			REV__ENST00000246635.7_1_17:39661629-39661743:-|nuORF	REV__ENST00000246635.7_1_17:39661629-39661743:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.2850341796875	3	559.956505	1676.84768	-1.2405	-0.00069462	-2.3389	-0.0013097	-3.5794	-0.0020043	559.9551534578053	45.632	0.39987	45.632	45.415	45.815	0					12	9	2	0	0	0	0.88916	1	3384	3384		3.4087	3.0373	1	67580	+		65596	24260	43593	43611	74468	74468					0.036334366221353775
WGSLAPGR	8	Unmodified	_WGSLAPGR_					0	0	0		ENST00000221566.6_1_19:2754860-2755205:-|nuORF	ENST00000221566.6_1_19:2754860-2755205:-|nuORF	ENST00000221566.6_1_19:2754860-2755205:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.2280578613281	2	422.22722	842.439886	-1.5227	-0.00064292	3.5197	0.0014861	1.997	0.00084319	422.2286072039903	64.658	1.0335	64.658	64.292	65.325	0					111	47	3	0	0	0	0.884	1	5681	5681		33.516	0	1	501820			65597	9172	43594	43612	74469	74469					0.01236379757335726
WGSRTSVTQQT	11	Unmodified	_WGSRTSVTQQT_					0	0	0		ENST00000549441.6_1_12:49741725-49741851:+|nuORF	ENST00000549441.6_1_12:49741725-49741851:+|nuORF	ENST00000549441.6_1_12:49741725-49741851:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	418.297607421875	3	417.542314	1249.60511	-1.8282	-0.00076335	-1.7142	-0.00071575	-3.5424	-0.0014791	417.87551056540724	71.394	0.12059	71.528	71.447	71.568	0.13356					6	5	2	0	0	0	0.17404	1	6490	6490		23.378	0	1	113070			65598	13639	43595	43613	74470	74470					-0.009704779643243455
WGTAAWVL	8	Unmodified	_WGTAAWVL_					0	0	0		ENST00000435422.7_1_5:156188230-156188422:+|nuORF	ENST00000435422.7_1_5:156188230-156188422:+|nuORF	ENST00000435422.7_1_5:156188230-156188422:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	451.9424133300781	2	452.239796	902.465038	-0.432	-0.00019537	-2.5196	-0.0011395	-2.9516	-0.0013348	452.23856602158037	55.519	1.0785	55.492	55.062	56.141	-0.027279					43	29	2	0	0	0	0.4196	1	5013	5013		25.45	8.977	1	163200			65599	11710	43596	43614	74471	74471					0.009904345599011322
WGTLRFDDS	9	Unmodified	_WGTLRFDDS_					0	0	0			REV__ENST00000375906.5_1_6:31633954-31634038:-|nuORF	REV__ENST00000375906.5_1_6:31633954-31634038:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	548.7573852539062	2	548.756538	1095.49852	-0.16766	-9.2004E-05	0.32896	0.00018052	0.1613	8.8514E-05	548.7565862807302	51.73	0.5129	51.645	51.388	51.901	-0.084538					25	15	2	0	0	0	0.64922	1	4155	4155		44.117	3.5442	1	119170	+		65600	25827	43597	43615	74472	74472					-0.04540608458864881
WGVTRAAHNP	10	Unmodified	_WGVTRAAHNP_					0	0	0			REV__nc|ENSG00000165138|Q68DC2-4|ANKS6	REV__nc|ENSG00000165138|Q68DC2-4|ANKS6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7863159179688	2	554.785964	1107.55738	0.3699	0.00020521	-1.549	-0.00085936	-1.1791	-0.00065415	554.7851771828723	57.541	0.69741	57.511	57.197	57.895	-0.029861					46	21	3	0	0	0	0.44803	1	5338	5338		60.118	7.0293	1	386890	+		65601	21153	43598	43616	74473	74473					0.00789912626100886
WHAKSFPM	8	Oxidation (M)	_WHAKSFPM(Oxidation (M))_		WHAKSFPM(1)		WHAKSFPM(77)	0	0	1			REV__ENSG00000084774|ENST00000264705|CAD	REV__ENSG00000084774|ENST00000264705|CAD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	510.2398986816406	2	510.242012	1018.46947	-1.6359	-0.00083471	-2.714	-0.0013848	-4.3499	-0.0022195	510.24047734070734	36.379	0.77333	36.379	36.181	36.955	0					24	17	2	0	0	0	0.47906	1	2100	2100		76.847	25.511	1	90149	+		65602	16883	43599	43617	74474	74474		243			-0.03902424288833117
WHFCSVGTQN	10	Unmodified	_WHFCSVGTQN_					0	0	0		ENSG00000198734|ENST00000367797|F5;CON__Q28107	ENSG00000198734|ENST00000367797|F5;CON__Q28107	ENSG00000198734|ENST00000367797|F5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.7545166015625	2	589.756015	1177.49748	0.47151	0.00027808	0.93895	0.00055375	1.4105	0.00083182	589.7564583936623	56.173	0.94886	56.732	56.452	57.401	0.55953					52	22	3	0	0	0	0.86763	1	5842	5842		26.693	2.1737	1	3158400		+	65603	8318;608	43600	43618	74475	74475					-0.08417146099395723
WHGLLAALL	9	Unmodified	_WHGLLAALL_					0	0	0			REV__ENSG00000185085|ENST00000330574|INTS5	REV__ENSG00000185085|ENST00000330574|INTS5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.7605895996094	2	497.297645	992.580737	-1.0766	-0.0005354	-4.1686	-0.002073	-5.2452	-0.0026084	497.29552653178916	44.248	0.97174	44.698	44.239	45.211	0.45025					30	23	2	0	0	0	0.20789	1	4036	4036		29.842	12.477	1	347610	+		65604	22735	43601	43619	74476	74476					0.08414958410742202
WHHGTLEN	8	Unmodified	_WHHGTLEN_					0	0	0			REV__ENST00000514473.2_1_14:22849323-22849389:-|nuORF	REV__ENST00000514473.2_1_14:22849323-22849389:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	496.7376708984375	2	497.230491	992.446428	0.24476	0.0001217	-1.7151	-0.00085282	-1.4704	-0.00073111	497.2293450411195	59.92	0.75863	59.888	59.489	60.248	-0.031727					44	19	3	0	0	0	0.4196	1	5589	5589		35.201	2.3883	1	244140	+		65605	28015	43602	43620	74477	74477					-0.05009727081960591
WHKKCQMK	8	Unmodified	_WHKKCQMK_					0	0	0			REV__nc|ENSG00000090376|Q9Y616-2|IRAK3	REV__nc|ENSG00000090376|Q9Y616-2|IRAK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.7764892578125	2	544.778239	1087.54193	0.88278	0.00048092	-3.5073	-0.0019107	-2.6245	-0.0014298	544.7762871878903	23.604	0.42782	23.03	22.792	23.219	-0.57415					15	9	2	0	0	0	0.91005	1	1067	1067		42.474	4.6629	1	82031	+		65606	16985	43603	43621	74478	74478					0.0016558651307150285
WHKKCQMK	8	Unmodified	_WHKKCQMK_					0	0	0			REV__nc|ENSG00000090376|Q9Y616-2|IRAK3	REV__nc|ENSG00000090376|Q9Y616-2|IRAK3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	544.778239	1087.54193	-0.023486	-1.2794E-05	-2.7369	-0.001491	-2.7604	-0.0015038	544.7767439430075	23.683	0.38238	23.301	23.108	23.491	-0.38178	0.13577	0.00041907	NaN	42.474	14	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73323	+		65607	16985	43603	43621							0.0016558651307150285
WHKKCQMK	8	Unmodified	_WHKKCQMK_					0	0	0			REV__nc|ENSG00000090376|Q9Y616-2|IRAK3	REV__nc|ENSG00000090376|Q9Y616-2|IRAK3	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	544.778239	1087.54193	0.88278	0.00048092	-3.5073	-0.0019107	-2.6245	-0.0014298	544.7762871878903	23.604	0.42782	23.03	22.792	23.219	-0.57415	-0.13577	-0.00042035	NaN	42.474	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82031	+		65608	16985	43603	43621							0.0016558651307150285
WHLLQKLRTKY	11	Unmodified	_WHLLQKLRTKY_					0	0	0			REV__nc|ENSG00000139697|A3KN83-3|SBNO1	REV__nc|ENSG00000139697|A3KN83-3|SBNO1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	495.95892333984375	3	495.961144	1484.8616	-0.73867	-0.00036635	-3.0906	-0.0015328	-3.8293	-0.0018992	495.9590677290455	104.07	2.3788	104.07	103.26	105.64	0					153	57	4	0	0	0	0.74771	1	10678	10678		22.562	1.5294	1	779320	+		65609	19562	43604	43622	74479	74479					0.13856669330562
WHMLFLSI	8	Unmodified	_WHMLFLSI_					0	0	0			REV__ENST00000583328.5_1_17:18210081-18218056:-|nuORF	REV__ENST00000583328.5_1_17:18210081-18218056:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7772216796875	2	523.778231	1045.54191	-0.10827	-5.6709E-05	-2.2467	-0.0011768	-2.355	-0.0012335	523.7768767176983	44.853	0.52919	45.316	45.025	45.554	0.46313					27	12	3	0	0	0	0.45589	1	4139	4139		77.944	10.45	1	1486900	+		65610	29069	43605	43623	74480	74480					0.02095909784725336
WHQTTVPAL	9	Unmodified	_WHQTTVPAL_					0	0	0		ENSG00000176542|ENST00000316407|USF3	ENSG00000176542|ENST00000316407|USF3	ENSG00000176542|ENST00000316407|USF3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	526.780029296875	2	526.779816	1051.54508	-1.1643	-0.00061331	1.2696	0.00066882	0.10537	5.5508E-05	526.7803385360115	62.777	0.9392	62.777	62.472	63.411	0					104	43	3	0	0	0	0.51592	1	5505	5505		51.193	1.7511	1	461120			65611	7087	43606	43624	74481	74481					0.021368761630810695
WHTILLLT	8	Unmodified	_WHTILLLT_					0	0	0			REV__ENST00000311417.6_1_3:178785505-178789764:-|nuORF	REV__ENST00000311417.6_1_3:178785505-178789764:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	498.79498291015625	2	498.797478	995.580402	-0.00081578	-4.0691E-07	-2.5284	-0.0012612	-2.5292	-0.0012616	498.7960129710008	20.608	0.77453	19.979	19.718	20.493	-0.6296					40	18	3	0	0	0	0.86791	1	706	706		28.254	0.37203	1	174900	+		65612	24904	43607	43625	74482	74482					0.08243538690885543
WHYYRFRPRWN	11	Unmodified	_WHYYRFRPRWN_					0	0	0			REV__nc|ENSG00000140199|Q9UHW9-6|SLC12A6;REV__nc|ENSG00000124140|Q9H2X9|SLC12A5	REV__nc|ENSG00000140199|Q9UHW9-6|SLC12A6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.3402099609375	3	560.948009	1679.8222	0.40252	0.00022579	3.2788	0.0018392	3.6813	0.002065	560.949295457395	102.22	0.11523	102.41	102.33	102.44	0.19484					4	2	2	0	0	0	0.18404	1	10746	10746		3.6191	3.2477	1	105410	+		65613	19600;29822	43608	43626	74483	74483					0.009479620997353777
WIADRAIL	8	Unmodified	_WIADRAIL_					0	0	0			REV__ENST00000523654.5_1_5:71615848-71615929:-|nuORF	REV__ENST00000523654.5_1_5:71615848-71615929:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27740478515625	2	479.279452	956.544351	-1.0919	-0.00052333	-3.0273	-0.0014509	-4.1192	-0.0019742	479.27789818348816	84.611	3.8887	84.611	83.362	87.251	0					354	91	5	0	0	0	0.88915	1	7912	7912		35.201	1.6851	1	4644500	+		65614	28144	43609	43627	74484	74484					0.0643408151404401
WIAGDVPLN	9	Unmodified	_WIAGDVPLN_					0	0	0		ENST00000455725.6_1_11:43364056-43364200:+|nuORF	ENST00000455725.6_1_11:43364056-43364200:+|nuORF	ENST00000455725.6_1_11:43364056-43364200:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	492.7598571777344	2	492.761092	983.507631	0.10695	5.27E-05	-2.8717	-0.0014151	-2.7648	-0.0013624	492.7595254403204	17.327	0.23129	16.716	16.567	16.798	-0.6107					8	4	2	0	0	0	0.69624	1	247	247		40.778	2.9666	1	115530			65615	11956	43610	43628	74485	74485					0.015217848974771186
WIAGDVPLN	9	Unmodified	_WIAGDVPLN_					0	0	0		ENST00000455725.6_1_11:43364056-43364200:+|nuORF	ENST00000455725.6_1_11:43364056-43364200:+|nuORF	ENST00000455725.6_1_11:43364056-43364200:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	492.761092	983.507631	0.12658	6.2372E-05	-2.9356	-0.0014466	-2.809	-0.0013842	492.75956894400673	17.264	0.31963	16.781	16.672	16.991	-0.48256	0.03238	-1.9647E-05	NaN	40.778	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141230			65616	11956	43610	43628							0.015217848974771186
WIAIPNRL	8	Unmodified	_WIAIPNRL_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79559326171875	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.81548	1	3868	3868		20.482	1.1219	1	1219600	+		65617	15493	43611	43629	74486	74486					0.08446074267999393
WICKLPTE	8	Unmodified	_WICKLPTE_					0	0	0			REV__nc|ENSG00000288558|O95620-2|DUS4L	REV__nc|ENSG00000288558|O95620-2|DUS4L	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.258544921875	2	495.259871	988.505189	-2.6631	-0.0013189	1.1215	0.00055543	-1.5416	-0.0007635	495.26028573461133	40.858	1.9733	41.25	40.867	42.841	0.39209					105	53	3	0	0	0	0.93529	1	3531	3531		52.299	6.3472	1	8396000	+		65618	17576	43612	43630	74487	74487					0.010476131681457446
WIDLRNPVLL	10	Unmodified	_WIDLRNPVLL_					0	0	0		chr3:185926734-185930113|17|11.76|0.68|4.1|-|1|TRA2B,None|1	chr3:185926734-185930113|17|11.76|0.68|4.1|-|1|TRA2B,None|1	chr3:185926734-185930113|17|11.76|0.68|4.1|-|1|TRA2B,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8692016601562	2	619.866423	1237.71829	2.0624	0.0012784	2.5108	0.0015564	4.5732	0.0028348	619.8678492982955	94.196	2.767	94.137	92.294	95.061	-0.059212					208	65	4	0	0	0	0.85981	1	9985	9985		35.152	2.3396	1	2061200			65619	397	43613	43631	74488	74488					0.10894242219501393
WIDLRNPVLL	10	Unmodified	_WIDLRNPVLL_					0	0	0		chr3:185926734-185930113|17|11.76|0.68|4.1|-|1|TRA2B,None|1	chr3:185926734-185930113|17|11.76|0.68|4.1|-|1|TRA2B,None|1	chr3:185926734-185930113|17|11.76|0.68|4.1|-|1|TRA2B,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8690185546875	2	619.866423	1237.71829	2.311	0.0014325	2.5285	0.0015673	4.8395	0.0029999	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.80179	1	10270	10270		39.253	0.44669	1	4854700			65620	397	43613	43631	74489	74489					0.10894242219501393
WIDLRNPVLL	10	Unmodified	_WIDLRNPVLL_					0	0	0		chr3:185926734-185930113|17|11.76|0.68|4.1|-|1|TRA2B,None|1	chr3:185926734-185930113|17|11.76|0.68|4.1|-|1|TRA2B,None|1	chr3:185926734-185930113|17|11.76|0.68|4.1|-|1|TRA2B,None|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8687744140625	2	619.866423	1237.71829	0.85836	0.00053207	3.8017	0.0023565	4.66	0.0028886	619.8686410709195	93.975	2.8634	94.136	92.286	95.15	0.16119					249	68	4	0	0	0	0.86763	1	9539	9539		26.693	2.4902	1	2724800			65621	397	43613	43631	74490	74490					0.10894242219501393
WIDPRLHTP	9	Unmodified	_WIDPRLHTP_					0	0	0		nc|ENSG00000241356|P0C626|OR5G3	nc|ENSG00000241356|P0C626|OR5G3	nc|ENSG00000241356|P0C626|OR5G3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.33056640625	2	567.806365	1133.59818	0.81456	0.00046251	4.406	0.0025017	5.2205	0.0029642	567.8087670691841	94.385	1.7717	94.548	94.248	96.02	0.16307					73	42	2	0	0	0	0.20789	1	9645	9645		20.947	0	1	142190			65622	15280	43614	43632	74491	74491					0.03672253945751436
WIFLDILV	8	Unmodified	_WIFLDILV_					0	0	0			REV__nc|ENSG00000142606|Q495T6-2|MMEL1	REV__nc|ENSG00000142606|Q495T6-2|MMEL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.80352783203125	2	509.802229	1017.5899	0.9788	0.00049899	1.9247	0.0009812	2.9035	0.0014802	509.8031445530612	84.432	2.5763	84.363	82.967	85.543	-0.069313					170	59	4	0	0	0	0.86288	1	8713	8713		26.796	0	1	979740	+		65623	19745	43615	43633	74492	74492					0.08181306976439373
WIFLDILV	8	Unmodified	_WIFLDILV_					0	0	0			REV__nc|ENSG00000142606|Q495T6-2|MMEL1	REV__nc|ENSG00000142606|Q495T6-2|MMEL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.80389404296875	2	509.802229	1017.5899	1.253	0.0006388	1.6726	0.00085271	2.9257	0.0014915	509.80297645117696	86.583	4.9803	86.51	85.191	90.172	-0.073814					334	116	4	0	0	0	0.884	1	8822	8822		33.516	3.674	1	3243500	+		65624	19745	43615	43633	74493	74493					0.08181306976439373
WIGGRAAAV	9	Unmodified	_WIGGRAAAV_					0	0	0			REV__ENST00000512701.6_1_9:15307110-15307170:-|nuORF	REV__ENST00000512701.6_1_9:15307110-15307170:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.75543212890625	2	450.756144	899.497735	-1.264	-0.00056978	-3.0711	-0.0013843	-4.3351	-0.0019541	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.76402	1	7655	7655		35.201	1.0282	1	414240	+		65625	27983	43616	43634	74494	74494					0.0439664168274021
WIHFTRRRRRR	11	Unmodified	_WIHFTRRRRRR_					0	0	0			REV__ENST00000317613.10_1_9:116303752-116304061:+|nuORF	REV__ENST00000317613.10_1_9:116303752-116304061:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	410.8982238769531	4	410.746179	1638.95561	0.17529	7.2E-05	-0.93235	-0.00038296	-0.75706	-0.00031096	410.7457880085999	18.017	0.75803	17.396	17.147	17.905	-0.62141					47	17	5	0	0	0	0.1838	1	309	309		3.2113	0	1	553410	+		65626	24966	43617	43635	74495	74495					0.16169245996070458
WIHFTRRRRRR	11	Unmodified	_WIHFTRRRRRR_					0	0	0			REV__ENST00000317613.10_1_9:116303752-116304061:+|nuORF	REV__ENST00000317613.10_1_9:116303752-116304061:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	410.8982238769531	4	410.746179	1638.95561	0.20349	8.3584E-05	-1.2268	-0.0005039	-1.0233	-0.00042032	410.7457659004923	17.638	0.35229	17.027	16.844	17.196	-0.6107					22	8	3	0	0	0	0.1838	1	309	309		3.2113	0	1	72064	+		65627	24966	43617	43635	74496	74496					0.16169245996070458
WIIAPKLW	8	Unmodified	_WIIAPKLW_					0	0	0		ENSG00000125255|ENST00000245312|SLC10A2	ENSG00000125255|ENST00000245312|SLC10A2	ENSG00000125255|ENST00000245312|SLC10A2	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8106689453125	2	513.810388	1025.60622	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.56	1	51.475	50.975	51.975	-0.084538								0	0	0	0.29199	1	4118	4118		29.842	4.3914	1				65628	3377	43618	43636	74497	74497					0.0944443293317363
WIIISPHSKL	10	Unmodified	_WIIISPHSKL_					0	0	0			REV__ENSG00000109323|ENST00000647097|MANBA	REV__ENSG00000109323|ENST00000647097|MANBA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	597.8561401367188	2	597.355691	1192.69683	0.84117	0.00050248	-0.70528	-0.0004213	0.1359	8.1178E-05	597.356091094499	94.317	5.5871	94.48	93.367	98.954	0.16308					440	131	5	0	0	0	0.85934	1	9740	9740		35.618	1.4457	1	18777000	+		65629	17755	43619	43637	74498	74498					0.10818857190793096
WIILPRLRSA	10	Unmodified	_WIILPRLRSA_					0	0	0		ENST00000361565.8_1_1:201845464-201845701:+|nuORF	ENST00000361565.8_1_1:201845464-201845701:+|nuORF	ENST00000361565.8_1_1:201845464-201845701:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	613.3846435546875	2	612.882407	1223.75026	-0.12345	-7.5661E-05	-4.0499	-0.0024821	-4.1733	-0.0025578	612.8794735432923	104.89	2.8735	104.89	104.24	107.11	0					239	67	7	0	0	0	0.86763	1	10917	10917		26.693	3.1702	1	38592000			65630	10484	43620	43638	74499	74499					0.14733654693304743
WIKASGRL	8	Unmodified	_WIKASGRL_					0	0	0			REV__ENSG00000111652|ENST00000543155|COPS7A	REV__ENSG00000111652|ENST00000543155|COPS7A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.77752685546875	2	465.779619	929.544686	-1.2002	-0.00055902	-3.1863	-0.0014841	-4.3865	-0.0020432	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.86677	1	7746	7746		27.882	2.4321	1	683640	+		65631	17881	43621	43639	74500	74500					0.07709501233898663
WIKLGTFHGR	10	Unmodified	_WIKLGTFHGR_					0	0	0		ENSG00000094975|ENST00000263688|SUCO;nc|ENSG00000094975|Q9UBS9-2|SUCO	ENSG00000094975|ENST00000263688|SUCO	ENSG00000094975|ENST00000263688|SUCO	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5639343261719	3	405.564614	1213.67201	-1.8641	-0.000756	1.5163	0.00061494	-0.3478	-0.00014106	405.56510136906576	61.167	0.87137	61.268	60.446	61.317	0.10082					82	40	3	0	0	0	0.86218	1	5308	5308		24.232	5.7008	1	1002300			65632	1715	43622	43640	74501	74501					0.07372222108097048
WIKLTKSIYN	10	Unmodified	_WIKLTKSIYN_					0	0	0		ENSG00000070269|ENST00000261556|TMEM260	ENSG00000070269|ENST00000261556|TMEM260	ENSG00000070269|ENST00000261556|TMEM260	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5817565917969	3	422.579929	1264.71796	2.9692	0.0012547	1.8573	0.00078486	4.8265	0.0020396	422.58062707178027	97.728	3.629	97.776	96.312	99.941	0.048164					208	84	4	0	0	0	0.86409	1	10429	10429		25.126	3.3456	1	464700			65633	1236	43623	43641	74502	74502					0.09618822499669477
WIKQILSTG	9	Unmodified	_WIKQILSTG_					0	0	0			REV__ENST00000506674.1_1_4:78804483-78828134:+|nuORF	REV__ENST00000506674.1_1_4:78804483-78828134:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.303466796875	2	523.305667	1044.59678	-1.5391	-0.00080541	-2.1942	-0.0011482	-3.7333	-0.0019536	523.3043931360254	91.382	2.3991	91.563	91.237	93.636	0.18029					145	56	4	0	0	0	0.78058	1	9115	9115		30.504	0	1	1040100	+		65634	21567	43624	43642	74503	74503					0.0762661985700106
WILLGLAWLAL	11	Unmodified	_WILLGLAWLAL_					0	0	0		ENSG00000095981|ENST00000437525|KCNK16;nc|ENSG00000095981|Q96T55|KCNK16	ENSG00000095981|ENST00000437525|KCNK16	ENSG00000095981|ENST00000437525|KCNK16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.8935546875	2	634.891909	1267.76927	0.93451	0.00059331	-0.32078	-0.00020366	0.61373	0.00038965	634.8918786153463	105.64	2.6597	105.75	104.86	107.52	0.10766					276	65	6	0	0	0	0.69735	1	11498	11498		31.955	5.2619	1	69492000			65635	1736	43625	43643	74504	74504					0.14609191264366927
WIMKQQNA	8	Unmodified	_WIMKQQNA_					0	0	0		nc|ENSG00000126838|P20742-2|PZP;ENSG00000126838|ENST00000261336|PZP	nc|ENSG00000126838|P20742-2|PZP	nc|ENSG00000126838|P20742-2|PZP	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	510.2084655761719	2	509.760569	1017.50659	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.868	1	30.868	30.368	31.368	0								0	0	0	0.29498	1	1437	1437		26.796	0.10319	1				65636	3474	43626	43644	74505	74505					-0.0014675274308046937
WINDSLLVW	9	Unmodified	_WINDSLLVW_					0	0	0		nc|ENSG00000197617|Q7Z5H4|VN1R5	nc|ENSG00000197617|Q7Z5H4|VN1R5	nc|ENSG00000197617|Q7Z5H4|VN1R5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.300048828125	2	573.303124	1144.5917	-0.43257	-0.000248	-2.4543	-0.0014071	-2.8869	-0.001655	573.3015257531335	72.569	0.63763	72.529	72.246	72.883	-0.04039					52	22	3	0	0	0	0.58151	1	7111	7111		47.916	1.9636	1	243080			65637	15194	43627	43645	74506	74506					0.025183159943708233
WIPSQEMGYN	10	Unmodified	_WIPSQEMGYN_					0	0	0		ENSG00000283755|ENST00000640559|CPHXL	ENSG00000283755|ENST00000640559|CPHXL	ENSG00000283755|ENST00000640559|CPHXL	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.8796997070312	2	612.771331	1223.52811	0.27745	0.00017001	-0.48901	-0.00029965	-0.21156	-0.00012964	612.7707193821544	104.55	0.61075	104.59	104.38	104.99	0.039864					21	14	2	0	0	0	0.37624	1	11411	11411		62.107	27.935	1	69289			65638	9063	43628	43646	74507	74507					-0.07471412504992259
WIQRPGLI	8	Unmodified	_WIQRPGLI_					0	0	0		ENSG00000274588|ENST00000611977|DGKK	ENSG00000274588|ENST00000611977|DGKK	ENSG00000274588|ENST00000611977|DGKK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	492.2945556640625	2	491.795269	981.575986	-0.69087	-0.00033977	0.56926	0.00027996	-0.12162	-5.981E-05	491.7958365285056	61.966	0.96044	62.073	61.687	62.647	0.10743					54	43	2	0	0	0	0.89457	1	5401	5401		37.028	1.8278	1	205670			65639	8998	43629	43647	74508	74508					0.08446074267999393
WIRGVGPG	8	Unmodified	_WIRGVGPG_					0	0	0			REV__ENSG00000073754|ENST00000368174|CD5L	REV__ENSG00000073754|ENST00000368174|CD5L	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.7828674316406	2	421.237587	840.460622	-1.8606	-0.00078375	3.0921	0.0013025	1.2315	0.00051875	421.2388476886547	36.556	0.31977	36.58	36.409	36.729	0.023624					13	9	2	0	0	0	0.4196	1	2024	2024		20.482	0	1	36213	+		65640	16680	43630	43648	74509	74509					0.034009701370109724
WIRIVVMLERL	11	Unmodified	_WIRIVVMLERL_					0	0	0			REV__nc|ENSG00000175221|Q9Y2X0-2|MED16	REV__nc|ENSG00000175221|Q9Y2X0-2|MED16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6248474121094	3	476.623364	1426.84826	-1.6911	-0.000806	2.4072	0.0011473	0.71614	0.00034133	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.78683	2	12458	12458;12533		14.086	1.1285	1	2577100	+		65641	22051	43631	43649	74510;74511	74510					0.1519109522701001
WIRSALAQ	8	Unmodified	_WIRSALAQ_					0	0	0			REV__ENST00000460547.6_1_6:43483727-43483814:-|nuORF	REV__ENST00000460547.6_1_6:43483727-43483814:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.765869140625	2	472.769252	943.52395	-1.4813	-0.00070033	-3.1091	-0.0014699	-4.5904	-0.0021702	472.76778971214105	81.58	2.2284	81.694	80.507	82.735	0.11426					112	53	4	0	0	0	0.8621	1	7748	7748		26.693	0	1	160160	+		65642	27007	43632	43650	74512	74512					0.04992910854218735
WIRYLVFLQIK	11	Unmodified	_WIRYLVFLQIK_					0	0	0		ENST00000421674.5_1_15:44177877-44211195:-|nuORF	ENST00000421674.5_1_15:44177877-44211195:-|nuORF	ENST00000421674.5_1_15:44177877-44211195:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.9713134765625	3	493.634257	1477.88094	0.075188	3.7116E-05	0.20713	0.00010225	0.28232	0.00013936	493.6344097287456	16.72	0.30251	16.779	16.656	16.959	0.059267					24	14	3	0	0	0	0.85873	1	179	179		5.4129	2.0042	1	86691			65643	11467	43633	43651	74513	74513					0.1611162562151094
WIVVNLVVALL	11	Unmodified	_WIVVNLVVALL_					0	0	0		ENST00000495329.1_1_2:202488980-202490962:-|nuORF;nc|ENSG00000155755|Q96Q45-4|TMEM237;nc|ENSG00000155755|Q96Q45-2|TMEM237;ENSG00000155755|ENST00000409883|TMEM237;nc|ENSG00000155755|Q96Q45-5|TMEM237;nc|ENSG00000155755|Q96Q45-3|TMEM237	ENST00000495329.1_1_2:202488980-202490962:-|nuORF	ENST00000495329.1_1_2:202488980-202490962:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.869384765625	2	619.897192	1237.77983	-1.2248	-0.00075924	-2.5228	-0.0015639	-3.7476	-0.0023231	619.8948086131481	95.923	0.21216	96.126	96.062	96.275	0.20242					6	4	2	0	0	0	0.16498	1	9813	9813		51.335	7.2187	1	33060			65644	5339	43634	43652	74514	74514					0.17045173918813816
WIVWPPKRKDV	11	Unmodified	_WIVWPPKRKDV_					0	0	0			REV__nc|ENSG00000168356|Q9UI33-2|SCN11A	REV__nc|ENSG00000168356|Q9UI33-2|SCN11A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.27813720703125	3	475.278473	1422.81359	-1.0084	-0.00047927	0.9785	0.00046506	-0.029888	-1.4205E-05	475.2788276348761	58.492	1.5243	59.046	58.555	60.079	0.55323					118	37	4	0	0	0	0.77205	1	6163	6163		17.167	0.63689	1	2160600	+		65645	21481	43635	43653	74515	74515					0.11909595410543261
WIYTEDRTRLN	11	Unmodified	_WIYTEDRTRLN_					0	0	0			REV__ENST00000555704.5_1_14:50159830-50218487:+|nuORF	REV__ENST00000555704.5_1_14:50159830-50218487:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	489.581787109375	3	489.584402	1465.73138	-0.51069	-0.00025003	-4.3945	-0.0021515	-4.9052	-0.0024015	489.58222289541936	67.723	0.63507	67.687	67.36	67.995	-0.035698					59	24	3	0	0	0	0.73277	1	6498	6498		25.892	1.6599	1	201420	+		65646	28687	43636	43654	74516	74516					0.017140285409368516
WIYTEDRTRLN	11	Unmodified	_WIYTEDRTRLN_					0	0	0			REV__ENST00000555704.5_1_14:50159830-50218487:+|nuORF	REV__ENST00000555704.5_1_14:50159830-50218487:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.58203125	3	489.584402	1465.73138	-2.4175	-0.0011836	-2.4231	-0.0011863	-4.8406	-0.0023699	489.58298583528295	67.595	0.74777	67.625	67.273	68.021	0.030563					62	29	4	0	0	0	0.69071	1	6425	6425		33.039	10.478	1	130780	+		65647	28687	43636	43654	74517	74517					0.017140285409368516
WKAQLRCAL	9	Unmodified	_WKAQLRCAL_					0	0	0		ENSG00000117595|ENST00000367021|IRF6	ENSG00000117595|ENST00000367021|IRF6	ENSG00000117595|ENST00000367021|IRF6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	544.80615234375	2	544.805311	1087.59607	0.78335	0.00042678	1.5204	0.00082834	2.3038	0.0012551	544.8060162221166	24.686	0.87633	24.7	24.336	25.212	0.013996					110	42	4	0	0	0	0.69914	1	835	835		40.573	5.4206	1	1007500			65648	2987	43637	43655	74518	74518					0.05577501936272711
WKAVQELWLRL	11	Unmodified	_WKAVQELWLRL_					0	0	0		ENST00000561688.1_1_16:2294286-2301561:-|nuORF;ENST00000563029.5_1_16:2293317-2301515:-|nuORF;nc|ENSG00000167969|P42126-2|ECI1;ENSG00000167969|ENST00000301729|ECI1	ENST00000561688.1_1_16:2294286-2301561:-|nuORF	ENST00000561688.1_1_16:2294286-2301561:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.9521789550781	3	481.281995	1440.82415	-0.81885	-0.0003941	4.0047	0.0019274	3.1859	0.0015333	481.2839595795984	103	2.1104	103	102.28	104.39	0					111	52	3	0	0	0	0.77511	1	10575	10575		16.53	1.8362	1	1092200			65649	6345	43638	43656	74519	74519					0.12137578064971422
WKAVQELWLRL	11	Unmodified	_WKAVQELWLRL_					0	0	0		ENST00000561688.1_1_16:2294286-2301561:-|nuORF;ENST00000563029.5_1_16:2293317-2301515:-|nuORF;nc|ENSG00000167969|P42126-2|ECI1;ENSG00000167969|ENST00000301729|ECI1	ENST00000561688.1_1_16:2294286-2301561:-|nuORF	ENST00000561688.1_1_16:2294286-2301561:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.28302001953125	3	481.281995	1440.82415	-0.094059	-4.5269E-05	2.3145	0.0011139	2.2205	0.0010687	481.2824632956746	102.92	3.58	102.92	102.27	105.85	0.0082092					167	86	3	0	0	0	0.77511	1	11105	11105		16.53	2.2866	1	832110			65650	6345	43638	43656	74520	74520					0.12137578064971422
WKAVQELWLRL	11	Unmodified	_WKAVQELWLRL_					0	0	0		ENST00000561688.1_1_16:2294286-2301561:-|nuORF;ENST00000563029.5_1_16:2293317-2301515:-|nuORF;nc|ENSG00000167969|P42126-2|ECI1;ENSG00000167969|ENST00000301729|ECI1	ENST00000561688.1_1_16:2294286-2301561:-|nuORF	ENST00000561688.1_1_16:2294286-2301561:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.28228759765625	3	481.281995	1440.82415	-0.57975	-0.00027902	4.4374	0.0021357	3.8577	0.0018566	481.28359993784676	102.78	2.1606	102.82	102.1	104.26	0.04319					140	52	5	0	0	0	0.76892	1	11175	11175		17.833	1.9125	1	978410			65651	6345	43638	43656	74521	74521					0.12137578064971422
WKAVQELWLRL	11	Unmodified	_WKAVQELWLRL_					0	0	0		ENST00000561688.1_1_16:2294286-2301561:-|nuORF;ENST00000563029.5_1_16:2293317-2301515:-|nuORF;nc|ENSG00000167969|P42126-2|ECI1;ENSG00000167969|ENST00000301729|ECI1	ENST00000561688.1_1_16:2294286-2301561:-|nuORF	ENST00000561688.1_1_16:2294286-2301561:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	481.2831726074219	3	481.281995	1440.82415	0.78444	0.00037754	2.2393	0.0010777	3.0238	0.0014553	481.2829969862694	102.73	2.2754	102.86	102.06	104.33	0.12622					121	56	3	0	0	0	0.76579	1	10849	10849		18.531	2.6104	1	1192200			65652	6345	43638	43656	74522	74522					0.12137578064971422
WKENILLSAR	10	Unmodified	_WKENILLSAR_					0	0	0		nc|ENSG00000146453|Q8NA58|PNLDC1;ENSG00000146453|ENST00000392167|PNLDC1	nc|ENSG00000146453|Q8NA58|PNLDC1	nc|ENSG00000146453|Q8NA58|PNLDC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	615.3582153320312	2	615.35368	1228.69281	3.0577	0.0018815	2.9896	0.0018397	6.0473	0.0037212	615.3555264925384	104.67	2.1648	104.63	104.19	106.35	-0.04039					150	51	4	0	0	0	0.8608	1	11566	11566		34.173	5.0025	1	2045600			65653	4847	43639	43657	74523	74523					0.08760767697094707
WKFIRLST	8	Unmodified	_WKFIRLST_					0	0	0			REV__ENSG00000099385|ENST00000215115|BCL7C	REV__ENSG00000099385|ENST00000215115|BCL7C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.8077392578125	2	525.808377	1049.6022	0.37076	0.00019495	-4.3251	-0.0022742	-3.9543	-0.0020792	525.8059200463551	18.457	0.52204	17.836	17.676	18.198	-0.62141					20	11	3	0	0	0	0.9295	1	390	390		55.504	0.72789	1	334860	+		65654	17095	43640	43658	74524	74524					0.07938343439445816
WKKDIVVAS	9	Unmodified	_WKKDIVVAS_					0	0	0		nc|ENSG00000075702|O43379|WDR62;ENSG00000075702|ENST00000401500|WDR62;nc|ENSG00000075702|O43379-3|WDR62;ENST00000378860.8_1_19:36545867-36564559:+|nuORF;nc|ENSG00000075702|O43379-2|WDR62	nc|ENSG00000075702|O43379|WDR62	nc|ENSG00000075702|O43379|WDR62	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3038940429688	2	523.305667	1044.59678	-0.83281	-0.00043582	-3.2133	-0.0016815	-4.0461	-0.0021173	523.3038658844911	86.796	2.9803	86.796	84.831	87.812	0					235	68	5	0	0	0	0.78058	1	8383	8383		30.504	1.3336	1	2778600			65655	1341	43641	43659	74525	74525					0.07626619856978323
WKKDIVVAS	9	Unmodified	_WKKDIVVAS_					0	0	0		nc|ENSG00000075702|O43379|WDR62;ENSG00000075702|ENST00000401500|WDR62;nc|ENSG00000075702|O43379-3|WDR62;ENST00000378860.8_1_19:36545867-36564559:+|nuORF;nc|ENSG00000075702|O43379-2|WDR62	nc|ENSG00000075702|O43379|WDR62	nc|ENSG00000075702|O43379|WDR62	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3041381835938	2	523.305667	1044.59678	-0.79828	-0.00041774	-3.1608	-0.0016541	-3.9591	-0.0020718	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.78058	1	8878	8878		30.504	2.6214	1	9288900			65656	1341	43641	43659	74526	74526					0.07626619856978323
WKKDIVVAS	9	Unmodified	_WKKDIVVAS_					0	0	0		nc|ENSG00000075702|O43379|WDR62;ENSG00000075702|ENST00000401500|WDR62;nc|ENSG00000075702|O43379-3|WDR62;ENST00000378860.8_1_19:36545867-36564559:+|nuORF;nc|ENSG00000075702|O43379-2|WDR62	nc|ENSG00000075702|O43379|WDR62	nc|ENSG00000075702|O43379|WDR62	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.303466796875	2	523.305667	1044.59678	-0.178	-9.3149E-05	-4.0857	-0.0021381	-4.2637	-0.0022312	523.3034155826722	86.354	3.0717	86.548	84.549	87.621	0.19379					266	71	6	0	0	0	0.76255	1	8441	8441		35.618	2.8059	1	4158500			65657	1341	43641	43659	74527	74527					0.07626619856978323
WKKDIVVAS	9	Unmodified	_WKKDIVVAS_					0	0	0		nc|ENSG00000075702|O43379|WDR62;ENSG00000075702|ENST00000401500|WDR62;nc|ENSG00000075702|O43379-3|WDR62;ENST00000378860.8_1_19:36545867-36564559:+|nuORF;nc|ENSG00000075702|O43379-2|WDR62	nc|ENSG00000075702|O43379|WDR62	nc|ENSG00000075702|O43379|WDR62	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3035278320312	2	523.305667	1044.59678	-1.4863	-0.0007778	-2.6443	-0.0013838	-4.1306	-0.0021616	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.76255	1	8357	8357		35.618	0	1	3566700			65658	1341	43641	43659	74528	74528					0.07626619856978323
WKKDIVVAS	9	Unmodified	_WKKDIVVAS_					0	0	0		nc|ENSG00000075702|O43379|WDR62;ENSG00000075702|ENST00000401500|WDR62;nc|ENSG00000075702|O43379-3|WDR62;ENST00000378860.8_1_19:36545867-36564559:+|nuORF;nc|ENSG00000075702|O43379-2|WDR62	nc|ENSG00000075702|O43379|WDR62	nc|ENSG00000075702|O43379|WDR62	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.303466796875	2	523.305667	1044.59678	-1.0823	-0.0005664	-2.8643	-0.0014989	-3.9466	-0.0020653	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.76255	2	10378	10378;10659		35.618	5.3006	1	13160000			65659	1341	43641	43659	74529;74530	74529					0.07626619856978323
WKKIVFVIFLR	11	Unmodified	_WKKIVFVIFLR_					0	0	0		ENSG00000279514|ENST00000623907|OR4C16	ENSG00000279514|ENST00000623907|OR4C16	ENSG00000279514|ENST00000623907|OR4C16	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.6444091796875	3	483.642864	1447.90676	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.41	1	119.44	118.94	119.94	0.026466								0	0	0	0.56276	1	13141	13141		9.6461	5.5632	1				65660	9045	43642	43660	74531	74531					0.20072519863765592
WKKRRESK	8	Unmodified	_WKKRRESK_					0	0	0			REV__ENST00000517389.5_1_8:103954275-103989979:+|nuORF	REV__ENST00000517389.5_1_8:103954275-103989979:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.3339233398438	2	559.333082	1116.65161	0.24055	0.00013455	1.8435	0.0010311	2.084	0.0011657	559.3340611599375	63.586	1.1315	64.14	63.598	64.729	0.5545					46	26	2	0	0	0	0.89962	1	6895	6895		38.806	0.99462	1	1971700	+		65661	28042	43643	43661	74532	74532					0.09795051448259073
WKLGLGLI	8	Unmodified	_WKLGLGLI_					0	0	0			REV__chr10:17386933-17390531|36|11.92|0.52|4.51|-|0|TE_info:MER48,MER48_dup122,ERV1,LTR,acceptor,-,17386607,17386933|None,ST8SIA6|5	REV__chr10:17386933-17390531|36|11.92|0.52|4.51|-|0|TE_info:MER48,MER48_dup122,ERV1,LTR,acceptor,-,17386607,17386933|None,ST8SIA6|5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	450.2744140625	2	450.289288	898.564024	0.68161	0.00030692	2.7371	0.0012325	3.4187	0.0015394	450.2904714459109	92.78	0.24669	92.939	92.794	93.04	0.15875					9	5	2	0	0	0	0.4196	1	9397	9397		14.664	0	1	275340	+		65662	15469	43644	43662	74533	74533					0.11068457524800124
WKLLKAHLLL	10	Unmodified	_WKLLKAHLLL_					0	0	0			REV__ENSG00000150760|ENST00000623213|DOCK1	REV__ENSG00000150760|ENST00000623213|DOCK1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	412.7663879394531	3	412.27266	1233.79615	-1.1191	-0.00046136	1.771	0.00073014	0.65195	0.00026878	412.27326134560764	43.519	1.3822	43.483	42.885	44.267	-0.03582					45	32	2	0	0	0	0.37624	1	3504	3504		16.717	9.3177	1	68469	+		65663	20220	43645	43663	74534	74534					0.18860299875541386
WKLTTQSSY	9	Unmodified	_WKLTTQSSY_					0	0	0			REV__ENST00000519943.1_1_5:179047997-179048251:-|nuORF	REV__ENST00000519943.1_1_5:179047997-179048251:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.2797241210938	2	557.282389	1112.55022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.086	1	68.116	67.616	68.616	0.030571								0	0	0	0.30416	1	6487	6487		29.15	0	1		+		65664	28011	43646	43664	74535	74535					-0.001548647649542545
WKLTTVKH	8	Unmodified	_WKLTTVKH_					0	0	0			REV__ENST00000462436.1_1_7:97484616-97487685:-|nuORF	REV__ENST00000462436.1_1_7:97484616-97487685:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.300048828125	2	506.800552	1011.58655	-1.3978	-0.00070841	2.5101	0.0012721	1.1123	0.0005637	506.8018833770329	53.841	1.1621	53.841	53.556	54.718	0					55	36	2	0	0	0	0.88185	1	4513	4513		32.812	4.9302	1	142170	+		65665	27052	43647	43665	74536	74536					0.08122056922411502
WKLTTVKH	8	Unmodified	_WKLTTVKH_					0	0	0			REV__ENST00000462436.1_1_7:97484616-97487685:-|nuORF	REV__ENST00000462436.1_1_7:97484616-97487685:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.7994079589844	2	506.800552	1011.58655	-0.4881	-0.00024737	1.8805	0.00095303	1.3924	0.00070566	506.80143835017117	52.987	1.0446	52.963	52.195	53.239	-0.023849					45	25	2	0	0	0	0.87479	1	4705	4705		30.504	6.3009	1	147470	+		65666	27052	43647	43665	74537	74537					0.08122056922411502
WKLTTVKH	8	Unmodified	_WKLTTVKH_					0	0	0			REV__ENST00000462436.1_1_7:97484616-97487685:-|nuORF	REV__ENST00000462436.1_1_7:97484616-97487685:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.79913330078125	2	506.800552	1011.58655	-0.048814	-2.4739E-05	0.95871	0.00048587	0.90989	0.00046113	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.81897	1	3172	3172		20.947	2.6225	1	475290	+		65667	27052	43647	43665	74538	74538					0.08122056922411502
WKLVDEGFM	9	Oxidation (M)	_WKLVDEGFM(Oxidation (M))_		WKLVDEGFM(1)		WKLVDEGFM(44)	0	0	1			REV__ENSG00000213203|ENST00000307194|GIMAP1	REV__ENSG00000213203|ENST00000307194|GIMAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	570.7686157226562	2	570.773342	1139.53213	0.19004	0.00010847	-4.1359	-0.0023607	-3.9459	-0.0022522	571.2723702822065	59.28	1.9344	59.249	58.133	60.067	-0.030888					98	54	2	0	0	0	0.64922	1	5550	5550		44.117	6.9577	1	117780	+		65668	23611	43648	43666	74539	74539		364			-0.032053230113206155
WKMLFHQNLQM	11	Unmodified	_WKMLFHQNLQM_					0	0	0		ENST00000470041.5_1_1:206136994-206141493:+|nuORF	ENST00000470041.5_1_1:206136994-206141493:+|nuORF	ENST00000470041.5_1_1:206136994-206141493:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	492.58154296875	3	492.581058	1474.72135	-1.1662	-0.00057443	2.5639	0.0012629	1.3978	0.00068852	492.58234560824593	25.158	0.69501	25.12	24.798	25.493	-0.037176					38	18	3	0	0	0	0.76579	1	972	972		18.531	1.3643	1	111400			65669	12215	43649	43667	74540	74540					0.002974260103655979
WKNVQLPK	8	Unmodified	_WKNVQLPK_					0	0	0			REV__nc|ENSG00000105053|Q8IV63-2|VRK3	REV__nc|ENSG00000105053|Q8IV63-2|VRK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.8001403808594	2	506.800552	1011.58655	-0.4991	-0.00025294	1.3209	0.00066945	0.82183	0.00041651	506.8011482581911	44.494	2.6105	44.503	42.78	45.391	0.0084534					109	64	3	0	0	0	0.87922	1	3179	3179		31.955	2.8053	1	373670	+		65670	17502	43650	43668	74541	74541					0.08122056922422871
WKPARSTLKL	10	Unmodified	_WKPARSTLKL_					0	0	0			REV__ENST00000378024.8_2_11:62290481-62290559:-|nuORF	REV__ENST00000378024.8_2_11:62290481-62290559:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	400.91461181640625	3	400.580152	1198.71863	5.542	0.00222	-4.0465	-0.0016209	1.4955	0.00059909	400.91304036236716	112.56	0.48872	112.6	112.44	112.93	0.032707					21	15	2	0	0	0	0.86151	1	13647	13647		15.333	3.1264	1	26399	+		65671	25884	43651	43669	74542	74542					0.1272166193934936
WKPPGERLQ	9	Unmodified	_WKPPGERLQ_					0	0	0		ENSG00000171357|ENST00000371980|LURAP1	ENSG00000171357|ENST00000371980|LURAP1	ENSG00000171357|ENST00000371980|LURAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	555.8057250976562	2	555.806365	1109.59818	-0.89307	-0.00049637	0.60808	0.00033797	-0.28499	-0.0001584	555.806604901083	59.553	0.91605	59.54	59.196	60.112	-0.013729					63	24	4	0	0	0	0.31972	1	5456	5456		63.306	4.5243	1	365910			65672	6660	43652	43670	74543	74543					0.047762539457608
WKPPGERLQ	9	Unmodified	_WKPPGERLQ_					0	0	0		ENSG00000171357|ENST00000371980|LURAP1	ENSG00000171357|ENST00000371980|LURAP1	ENSG00000171357|ENST00000371980|LURAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.8059692382812	2	555.806365	1109.59818	-0.44432	-0.00024695	0.00051525	2.8638E-07	-0.4438	-0.00024667	555.8063523892554	59.451	1.0465	59.483	59.019	60.065	0.032825					57	25	3	0	0	0	0.44421	1	5470	5470		54.776	3.5836	1	387260			65673	6660	43652	43670	74544	74544					0.047762539457608
WKQAQLLA	8	Unmodified	_WKQAQLLA_					0	0	0			REV__ENST00000483657.1_1_2:97755791-97757446:-|nuORF	REV__ENST00000483657.1_1_2:97755791-97757446:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.2774353027344	2	479.279452	956.544351	-0.098244	-4.7086E-05	-4.1769	-0.0020019	-4.2751	-0.002049	479.2773544935443	84.519	7.0761	84.586	82.83	89.906	0.067169					495	164	6	0	0	0	0.86791	1	8320	8320		28.254	0.37203	1	6799600	+		65674	19876	43653	43671	74545	74545					0.06434081514032641
WKQAQLLA	8	Unmodified	_WKQAQLLA_					0	0	0			REV__ENST00000483657.1_1_2:97755791-97757446:-|nuORF	REV__ENST00000483657.1_1_2:97755791-97757446:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.277587890625	2	479.279452	956.544351	0.29447	0.00014113	-4.2782	-0.0020505	-3.9838	-0.0019093	479.2772779961373	84.181	4.1202	84.616	83.175	87.295	0.43538					352	100	4	0	0	0	0.89457	1	9908	9908		37.028	4.2161	1	5642300	+		65675	19876	43653	43671	74546	74546					0.06434081514032641
WKQFLKLLIP	10	Unmodified	_WKQFLKLLIP_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|5|1|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2867361204306238|0.2808252408673861|2.2|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	643.4049682617188	2	643.405184	1284.79581	1.777	0.0011433	1.1476	0.00073835	2.9246	0.0018817	643.4059831518348	106.95	1.1451	106.98	106.72	107.86	0.03688					79	26	4	0	0	0	0.86718	1	11814	11814		27.882	4.3595	1	1597700	+		65676	29553	43654	43672	74547	74547					0.16480880155700106
WKRESRKK	8	Unmodified	_WKRESRKK_					0	0	0			REV__nc|ENSG00000122008|Q9UBT6-3|POLK	REV__nc|ENSG00000122008|Q9UBT6-3|POLK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.333984375	2	559.333082	1116.65161	-0.033266	-1.8607E-05	2.0815	0.0011643	2.0483	0.0011457	559.3341809592414	63.698	1.6782	64.085	63.314	64.992	0.38681					59	38	2	0	0	0	0.9295	1	6866	6866		55.504	6.0627	1	1917400	+		65677	18476	43655	43673	74548	74548					0.09795051448259073
WKRPLPVIL	9	Unmodified	_WKRPLPVIL_					0	0	0		ENSG00000253598|ENST00000518568|SLC10A5	ENSG00000253598|ENST00000518568|SLC10A5	ENSG00000253598|ENST00000518568|SLC10A5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	561.3633422851562	2	561.363319	1120.71209	-1.2272	-0.00068889	2.0811	0.0011683	0.85392	0.00047936	561.3643862619919	45.972	0.98896	45.972	45.502	46.491	0					58	25	3	0	0	0	0.7932	1	3449	3449		19.36	1.0356	1	208060			65678	8862	43656	43674	74549	74549					0.15655768778628953
WKRRKLKH	8	Unmodified	_WKRRKLKH_					0	0	0		ENST00000542123.5_1_12:12966350-12967071:+|nuORF	ENST00000542123.5_1_12:12966350-12967071:+|nuORF	ENST00000542123.5_1_12:12966350-12967071:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	576.366455078125	2	576.367259	1150.71996	-0.050615	-2.9173E-05	3.8428	0.0022149	3.7922	0.0021857	576.3693955908053	50.925	1.1269	50.833	50.377	51.504	-0.091793					52	31	2	0	0	0	0.83058	1	3972	3972		12.959	0.75233	1	184910			65679	13526	43657	43675	74550	74550					0.1506334081877867
WKRRPLKARNF	11	Unmodified	_WKRRPLKARNF_					0	0	0		ENST00000463527.5_1_1:155141918-155144917:-|nuORF	ENST00000463527.5_1_1:155141918-155144917:-|nuORF	ENST00000463527.5_1_1:155141918-155144917:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2991027832031	3	491.29675	1470.86842	2.8446	0.0013975	1.2883	0.00063292	4.1328	0.0020305	491.29732308943403	107.89	0.72864	107.86	107.19	107.92	-0.031487					50	17	5	0	0	0	0.7896	1	11972	11972		13.508	4.2961	1	160890000			65680	12070	43658	43676	74551	74551					0.15182027001833376
WKRRPLKARNF	11	Unmodified	_WKRRPLKARNF_					0	0	0		ENST00000463527.5_1_1:155141918-155144917:-|nuORF	ENST00000463527.5_1_1:155141918-155144917:-|nuORF	ENST00000463527.5_1_1:155141918-155144917:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.2999267578125	3	491.29675	1470.86842	2.8436	0.001397	1.9455	0.00095581	4.789	0.0023528	491.29763520056855	112.87	7.7849	112.84	112.19	119.97	-0.024811					553	277	2	0	0	0	0.81021	1	13103	13103		9.2118	2.5522	1	3274400			65681	12070	43658	43676	74552	74552					0.15182027001833376
WKRRPLKARNF	11	Unmodified	_WKRRPLKARNF_					0	0	0		ENST00000463527.5_1_1:155141918-155144917:-|nuORF	ENST00000463527.5_1_1:155141918-155144917:-|nuORF	ENST00000463527.5_1_1:155141918-155144917:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.2991027832031	3	491.29675	1470.86842	-0.62537	-0.00030724	4.4053	0.0021643	3.7799	0.001857	491.2988723972927	107.84	0.50114	107.98	107.57	108.07	0.13866					45	12	6	0	0	0	0.79224	1	11594	11594		12.957	0	1	325610000			65682	12070	43658	43676	74553	74553					0.15182027001833376
WKRRPNPRVPW	11	Unmodified	_WKRRPNPRVPW_					0	0	0		chr3:108414428-108416812|32|20.28|0.92|4.46|-|1|MYH15,MYH15|2	chr3:108414428-108416812|32|20.28|0.92|4.46|-|1|MYH15,MYH15|2	chr3:108414428-108416812|32|20.28|0.92|4.46|-|1|MYH15,MYH15|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.9516906738281	3	497.952983	1490.83712	0.10761	5.3585E-05	-3.9815	-0.0019826	-3.8738	-0.001929	497.950900999296	17.997	0.66156	17.376	17.06	17.722	-0.62141					39	15	4	0	0	0	0.7896	1	316	316		13.508	1.5756	1	326330			65683	384	43659	43677	74554	74554					0.11133453967727291
WKTLLLNLL	9	Unmodified	_WKTLLLNLL_					0	0	0		ENST00000403162.7_1_17:61843360-61843432:-|nuORF	ENST00000403162.7_1_17:61843360-61843432:-|nuORF	ENST00000403162.7_1_17:61843360-61843432:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	557.3566284179688	2	557.35516	1112.69577	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.34	1	119.4	118.9	119.9	0.060577								0	0	0	0.34348	1	12523	12523		16.473	3.514	1				65684	11250	43660	43678	74555	74555					0.14392642821894697
WKTPTYGKLW	10	Unmodified	_WKTPTYGKLW_					0	0	0		ENST00000380290.7_1_15:64365092-64365212:-|nuORF	ENST00000380290.7_1_15:64365092-64365212:-|nuORF	ENST00000380290.7_1_15:64365092-64365212:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3466186523438	2	640.345323	1278.67609	1.7833	0.0011419	0.058981	3.7768E-05	1.8423	0.0011797	640.3453874628556	103.41	0.76866	103.63	103.42	104.19	0.22556					52	18	4	0	0	0	0.64457	2	12558	12558;12611		47.657	3.2801	1	7100500			65685	10919	43661	43679	74556;74557	74556					0.047902668111191815
WKVFPKAR	8	Unmodified	_WKVFPKAR_					0	0	0		ENST00000514430.5_1_4:103553216-103586042:-|nuORF;ENSG00000109323|ENST00000647097|MANBA	ENST00000514430.5_1_4:103553216-103586042:-|nuORF	ENST00000514430.5_1_4:103553216-103586042:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.3142700195312	2	516.311087	1030.60762	1.9037	0.0009829	3.7546	0.0019385	5.6583	0.0029214	516.3129226314311	98.802	2.8489	99.164	98.65	101.5	0.36137					258	71	5	0	0	0	0.86288	1	12218	12218		26.796	0	1	22616000			65686	2458	43662	43680	74558	74558					0.09354067021922674
WKVLTWLRYTL	11	Unmodified	_WKVLTWLRYTL_					0	0	0		nc|ENSG00000074696|Q9P035-2|HACD3;ENSG00000074696|ENST00000261875|HACD3	nc|ENSG00000074696|Q9P035-2|HACD3	nc|ENSG00000074696|Q9P035-2|HACD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.95526123046875	3	493.622128	1477.84456	-1.8007	-0.00088885	-0.44364	-0.00021899	-2.2443	-0.0011078	493.6218802691259	31.167	0.9176	31.167	30.72	31.638	0					75	31	3	0	0	0	0.77511	1	1469	1469		16.53	4.097	1	50794			65687	1312	43663	43681	74559	74559					0.12474748724775964
WKVRNWLKKLG	11	Unmodified	_WKVRNWLKKLG_					0	0	0			REV__ENSG00000185697|ENST00000522677|MYBL1	REV__ENSG00000185697|ENST00000522677|MYBL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.62432861328125	3	476.625984	1426.85612	-1.6911	-0.000806	-3.0916	-0.0014735	-4.7826	-0.0022795	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.76892	1	12899	12899		17.833	7.7292	1	2577100	+		65688	22785	43664	43682	74560	74560					0.15976990538752034
WKVSTQGLFVA	11	Unmodified	_WKVSTQGLFVA_					0	0	0		nc|ENSG00000103429|Q9NZS9-2|BFAR;ENSG00000103429|ENST00000261658|BFAR	nc|ENSG00000103429|Q9NZS9-2|BFAR	nc|ENSG00000103429|Q9NZS9-2|BFAR	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	618.3451538085938	2	618.342781	1234.67101	1.7831	0.0011026	3.3541	0.002074	5.1372	0.0031766	618.3447766932444	97.715	2.3664	98.106	97.031	99.398	0.39065					180	57	4	0	0	0	0.70737	1	11768	11768		30.318	3.6248	1	974160			65689	2083	43665	43683	74561	74561					0.06305962948522392
WKVVPIEIGLH	11	Unmodified	_WKVVPIEIGLH_					0	0	0		ENST00000370800.4_1_X:133547664-133547919:+|nuORF	ENST00000370800.4_1_X:133547664-133547919:+|nuORF	ENST00000370800.4_1_X:133547664-133547919:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.8839111328125	2	645.882073	1289.74959	-1.1412	-0.00073708	4.3158	0.0027875	3.1746	0.0020504	645.8847051303749	106.33	1.2879	106.38	106.14	107.43	0.053757					81	30	3	0	0	0	0.7342	1	11338	11338		25.574	3.6142	1	1694400			65690	10650	43666	43684	74562	74562					0.11630815253602123
WKWQFPVALKL	11	Unmodified	_WKWQFPVALKL_					0	0	0			REV__ENSG00000148358|ENST00000347136|GPR107	REV__ENSG00000148358|ENST00000347136|GPR107	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.6112365722656	3	472.611452	1414.81253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.59	1	119.62	119.12	120.12	0.026466								0	0	0	0.56276	1	13158	13158		14.086	0	1		+		65691	20113	43667	43685	74563	74563					0.12171381041662244
WKWWEEERYPE	11	Unmodified	_WKWWEEERYPE_					0	0	0		ENSG00000198900|ENST00000361337|TOP1	ENSG00000198900|ENST00000361337|TOP1	ENSG00000198900|ENST00000361337|TOP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	546.5838623046875	3	546.584291	1636.73104	0.4248	0.00023219	1.6628	0.00090887	2.0876	0.0011411	546.5851526157304	23.492	1.0829	23.552	23.24	24.323	0.060431					64	33	3	0	0	0	0.8498	1	777	777		6.001	0.30226	1	44407			65692	8363	43668	43686	74564	74564					-0.06185391178928512
WKWWEEERYPE	11	Unmodified	_WKWWEEERYPE_					0	0	0		ENSG00000198900|ENST00000361337|TOP1	ENSG00000198900|ENST00000361337|TOP1	ENSG00000198900|ENST00000361337|TOP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	546.9177856445312	3	546.584291	1636.73104	1.2419	0.00067879	0.36222	0.00019799	1.6041	0.00087678	546.5842195086688	23.856	1.2474	23.282	22.792	24.039	-0.57415					68	28	3	0	0	0	0.86672	1	1115	1115		4.8861	0.54733	1	207460			65693	8363	43668	43686	74565	74565					-0.06185391178928512
WKYKCIRWFRW	11	Unmodified	_WKYKCIRWFRW_					0	0	0			REV__ENST00000419746.5_1_2:179403628-179404009:+|nuORF	REV__ENST00000419746.5_1_2:179403628-179404009:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	557.9581909179688	3	557.962491	1670.86564	-1.6152	-0.00090122	-1.8528	-0.0010338	-3.468	-0.001935	557.9614876769658	17.649	0.43187	17.649	17.461	17.893	0					46	19	4	0	0	0	0.85439	1	221	221		5.6988	4.28	1	290500	+		65694	26478	43669	43687	74566	74566					0.05704435552615905
WKYKCIRWFRW	11	Unmodified	_WKYKCIRWFRW_					0	0	0			REV__ENST00000419746.5_1_2:179403628-179404009:+|nuORF	REV__ENST00000419746.5_1_2:179403628-179404009:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	558.294677734375	3	557.962491	1670.86564	0.096108	5.3624E-05	-3.4625	-0.001932	-3.3664	-0.0018783	557.9605686448617	17.508	0.49417	17.584	17.372	17.867	0.075443					59	19	5	0	0	0	0.8498	1	187	187		6.001	2.7897	1	477090	+		65695	26478	43669	43687	74567	74567					0.05704435552615905
WKYKCIRWFRW	11	Unmodified	_WKYKCIRWFRW_					0	0	0			REV__ENST00000419746.5_1_2:179403628-179404009:+|nuORF	REV__ENST00000419746.5_1_2:179403628-179404009:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	557.9592895507812	3	557.962491	1670.86564	0.090182	5.0318E-05	-3.406	-0.0019004	-3.3158	-0.0018501	557.9606132565953	17.734	0.62333	17.658	17.423	18.046	-0.07671					69	24	4	0	0	0	0.92084	1	226	226		1.3219	0.95051	1	436250	+		65696	26478	43669	43687	74568	74568					0.05704435552615905
WLAAPPRLAR	10	Unmodified	_WLAAPPRLAR_					0	0	0		nc|ENSG00000156860|Q9HAH7-1|FBRS;nc|ENSG00000156860|Q9HAH7|FBRS;ENST00000494101.1_1_16:30680055-30680963:+|nuORF;ENSG00000156860|ENST00000356166|FBRS	nc|ENSG00000156860|Q9HAH7-1|FBRS;ENSG00000156860|ENST00000356166|FBRS	ENSG00000156860|ENST00000356166|FBRS	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.8425903320312	2	575.845825	1149.6771	-0.46596	-0.00026832	-4.3031	-0.0024779	-4.7691	-0.0027463	575.8432151649837	92.754	3.8962	92.754	91.59	95.486	0					320	90	5	0	0	0	0.84112	1	9217	9217		37.159	2.0071	1	3411000			65697	15018;5396	43670	43688	74569	74569					0.1082452597070187
WLAAPPRLAR	10	Unmodified	_WLAAPPRLAR_					0	0	0		nc|ENSG00000156860|Q9HAH7-1|FBRS;nc|ENSG00000156860|Q9HAH7|FBRS;ENST00000494101.1_1_16:30680055-30680963:+|nuORF;ENSG00000156860|ENST00000356166|FBRS	nc|ENSG00000156860|Q9HAH7-1|FBRS;ENSG00000156860|ENST00000356166|FBRS	ENSG00000156860|ENST00000356166|FBRS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	575.8433837890625	2	575.845825	1149.6771	-1.368	-0.00078773	-3.7183	-0.0021412	-5.0862	-0.0029289	575.8435656349662	92.348	5.101	92.534	91.242	96.343	0.18582					387	121	5	0	0	0	0.86589	1	9491	9491		29.15	2.1022	1	6121300			65698	15018;5396	43670	43688	74570	74570					0.1082452597070187
WLADTEELI	9	Unmodified	_WLADTEELI_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|O94854|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	545.316650390625	2	545.276772	1088.53899	1.1776	0.0006421	0.46789	0.00025513	1.6455	0.00089724	545.2770676179844	88.642	0.69498	88.692	88.316	89.011	0.050415					38	16	3	0	0	0	0.20789	1	9066	9066		30.504	0.18592	1	389450			65699	3510	43671	43689	74571	74571					-0.0017368685910241766
WLAESVLDI	9	Unmodified	_WLAESVLDI_					0	0	0		ENSG00000143624|ENST00000318967|INTS3;nc|ENSG00000143624|Q68E01|INTS3;ENST00000481797.5_1_1:153721154-153726193:+|nuORF	ENSG00000143624|ENST00000318967|INTS3	ENSG00000143624|ENST00000318967|INTS3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.303466796875	2	523.281857	1044.54916	1.6846	0.00088151	1.5121	0.00079127	3.1967	0.0016728	523.2837685345726	88.88	1.1546	88.807	88.281	89.436	-0.07238					56	27	3	0	0	0	0.20789	1	9244	9244		55.504	26.355	1	113840			65700	4652	43672	43690	74572	74572					0.028669208661540324
WLAFVLQICV	10	Unmodified	_WLAFVLQICV_					0	0	0			REV__nc|ENSG00000221977|Q8NGC2|OR4E2	REV__nc|ENSG00000221977|Q8NGC2|OR4E2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	596.3323974609375	2	596.33337	1190.65219	-0.30561	-0.00018224	-0.47633	-0.00028405	-0.78194	-0.00046629	596.3329750609926	96.457	3.1544	96.457	95.486	98.641	0					216	74	4	0	0	0	0.84112	1	9732	9732		37.159	2.0071	1	740920	+		65701	23721	43673	43691	74573	74573					0.06448710053109608
WLAKVARRAV	10	Unmodified	_WLAKVARRAV_					0	0	0			REV__nc|ENSG00000134109|Q92611-2|EDEM1	REV__nc|ENSG00000134109|Q92611-2|EDEM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	585.36572265625	2	585.366924	1168.7193	-0.77125	-0.00045146	-3.2061	-0.0018768	-3.9774	-0.0023282	585.3651006310033	97.781	1.0682	97.838	97.422	98.49	0.056831					64	24	3	0	0	0	0.86589	1	10363	10363		29.15	4.6304	1	408070	+		65702	19115	43674	43692	74574	74574					0.1416850137907204
WLALGPQPLR	10	Unmodified	_WLALGPQPLR_					0	0	0			REV__ENST00000392439.7_2_12:123444829-123459287:-|nuORF	REV__ENST00000392439.7_2_12:123444829-123459287:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.8435668945312	2	575.840208	1149.66586	0.91497	0.00052687	3.8893	0.0022396	4.8043	0.0027665	575.8423131361362	90.432	2.8004	90.479	88.667	91.467	0.046448					215	66	4	0	0	0	0.85939	1	9243	9243		23.042	0.46283	1	2025300	+		65703	26020	43675	43693	74575	74575					0.09701703876544343
WLALLPLHGN	10	Unmodified	_WLALLPLHGN_					0	0	0		ENST00000357084.7_1_16:28913561-28913952:+|nuORF	ENST00000357084.7_1_16:28913561-28913952:+|nuORF	ENST00000357084.7_1_16:28913561-28913952:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3297119140625	2	567.326934	1132.63931	1.5887	0.00090129	3.6924	0.0020948	5.2811	0.0029961	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.86305	1	9509	9509		31.955	7.4357	1	5459400			65704	10380	43676	43694	74576	74576					0.07830014985211164
WLALLPLHGN	10	Unmodified	_WLALLPLHGN_					0	0	0		ENST00000357084.7_1_16:28913561-28913952:+|nuORF	ENST00000357084.7_1_16:28913561-28913952:+|nuORF	ENST00000357084.7_1_16:28913561-28913952:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3289794921875	2	567.326934	1132.63931	1.8589	0.0010546	3.176	0.0018018	5.0349	0.0028564	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86201	5	10079	9790;9850;9996;10079;10092		31.955	8.9124	1	15439000			65705	10380	43676	43694	74577;74578;74579;74580;74581	74580					0.07830014985211164
WLALLPLHGN	10	Unmodified	_WLALLPLHGN_					0	0	0		ENST00000357084.7_1_16:28913561-28913952:+|nuORF	ENST00000357084.7_1_16:28913561-28913952:+|nuORF	ENST00000357084.7_1_16:28913561-28913952:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3300170898438	2	567.326934	1132.63931	1.497	0.00084932	3.499	0.0019851	4.9961	0.0028344	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.86201	3	9659	9659;9756;9971		31.955	2.7848	1	15259000			65706	10380	43676	43694	74582;74583;74584	74582					0.07830014985211164
WLALLPLHGN	10	Unmodified	_WLALLPLHGN_					0	0	0		ENST00000357084.7_1_16:28913561-28913952:+|nuORF	ENST00000357084.7_1_16:28913561-28913952:+|nuORF	ENST00000357084.7_1_16:28913561-28913952:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3299560546875	2	567.326934	1132.63931	0.79571	0.00045143	4.1414	0.0023495	4.9371	0.0028009	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.84112	5	9259	9259;9379;9403;9561;9598		37.159	7.9891	1	18145000			65707	10380	43676	43694	74585;74586;74587;74588;74589	74585					0.07830014985211164
WLALLPLHGN	10	Unmodified	_WLALLPLHGN_					0	0	0		ENST00000357084.7_1_16:28913561-28913952:+|nuORF	ENST00000357084.7_1_16:28913561-28913952:+|nuORF	ENST00000357084.7_1_16:28913561-28913952:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.330322265625	2	567.326934	1132.63931	1.3743	0.0007797	3.9991	0.0022688	5.3735	0.0030485	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.777	7	11305	10836;10967;11041;11053;11114;11193;11305		40.573	12.69	1	6182600			65708	10380	43676	43694	74590;74591;74592;74593;74594;74595;74596	74596					0.07830014985211164
WLAPVIPALWE	11	Unmodified	_WLAPVIPALWE_					0	0	0		AluSg_dup29696|chr16:69374686-69374983:+|1.2678744992511422|0.0117409257950445|6.75|63.0|1|1|sense	AluSg_dup29696|chr16:69374686-69374983:+|1.2678744992511422|0.0117409257950445|6.75|63.0|1|1|sense	AluSg_dup29696|chr16:69374686-69374983:+|1.2678744992511422|0.0117409257950445|6.75|63.0|1|1|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	647.8639526367188	2	647.863349	1293.71214	0.9446	0.00061197	2.461	0.0015944	3.4056	0.0022063	647.8646210183678	111.89	0.33094	111.95	111.76	112.09	0.069542					11	9	2	0	0	0	0.17564	1	12056	12056		27.882	3.3631	1	528560			65709	4	43677	43695	74597	74597					0.07703723987947342
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8687133789062	2	619.870697	1237.72684	-0.2143	-0.00013284	-1.9373	-0.0012009	-2.1516	-0.0013337	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.77546	1	9383	9383		31.955	6.3808	1	1169100	+		65710	28189	43678	43696	74598	74598					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8693237304688	2	619.870697	1237.72684	-0.18235	-0.00011304	-1.6774	-0.0010398	-1.8597	-0.0011528	619.8695055200118	96.258	3.9047	96.258	95.357	99.262	0					327	92	5	0	0	0	0.7932	1	9641	9641		24.203	0	1	2627900	+		65711	28189	43678	43696	74599	74599					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.868408203125	2	619.870697	1237.72684	-0.30632	-0.00018988	-2.0347	-0.0012612	-2.341	-0.0014511	619.8692700561393	94.215	2.8116	94.284	92.498	95.31	0.069603					208	66	4	0	0	0	0.5393	4	9874	9791;9815;9827;9874		50.025	9.9664	1	2103100	+		65712	28189	43678	43696	74600;74601;74602;74603	74603					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.8695068359375	2	619.870697	1237.72684	-0.30615	-0.00018977	-1.6683	-0.0010342	-1.9745	-0.0012239	619.8695261963289	96.08	5.0715	96.146	95.265	100.34	0.06591					370	118	5	0	0	0	0.62081	3	10155	10084;10096;10155		45.952	6.6991	1	4796900	+		65713	28189	43678	43696	74604;74605;74606	74606					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8685913085938	2	619.870697	1237.72684	2.0624	0.0012784	-4.3843	-0.0027177	-2.3219	-0.0014393	619.8678492982955	94.196	2.767	94.137	92.294	95.061	-0.059212					208	65	4	0	0	0	0.58151	2	10078	9961;10078		47.916	11.469	1	2061200	+		65714	28189	43678	43696	74607;74608	74608					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8695678710938	2	619.870697	1237.72684	2.311	0.0014325	-4.3665	-0.0027067	-2.0555	-0.0012742	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.58151	6	10378	10212;10248;10306;10318;10378;10472		47.916	9.0428	1	4854700	+		65715	28189	43678	43696	74609;74610;74611;74612;74613;74614	74613					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8690185546875	2	619.870697	1237.72684	0.62246	0.00038584	-2.9192	-0.0018095	-2.2967	-0.0014237	619.8687823008486	94.059	2.9324	94.104	92.154	95.087	0.045448					223	69	4	0	0	0	0.58151	4	9837	9837;9872;9907;9920		47.916	12.297	1	2371600	+		65716	28189	43678	43696	74615;74616;74617;74618	74615					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.869140625	2	619.870697	1237.72684	0.62564	0.00038782	-2.6308	-0.0016308	-2.0052	-0.0012429	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.62081	5	10193	10110;10145;10157;10193;10229		45.952	7.2763	1	4779100	+		65717	28189	43678	43696	74619;74620;74621;74622;74623	74622					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8693237304688	2	619.870697	1237.72684	1.2648	0.00078404	-3.4711	-0.0021516	-2.2062	-0.0013676	619.86841143733	93.879	2.9041	94.108	92.241	95.145	0.22863					217	69	4	0	0	0	0.62081	6	9588	9576;9588;9611;9623;9649;9674		45.952	14.422	1	2572300	+		65718	28189	43678	43696	74624;74625;74626;74627;74628;74629	74625					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.869384765625	2	619.870697	1237.72684	1.2689	0.00078657	-3.2848	-0.0020362	-2.0159	-0.0012496	619.8685418876909	95.817	5.4951	96.048	95.026	100.52	0.23103					412	129	5	0	0	0	0.58151	5	9928	9821;9833;9844;9880;9928		47.916	14.422	1	6493200	+		65719	28189	43678	43696	74630;74631;74632;74633;74634	74634					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8690185546875	2	619.870697	1237.72684	0.85836	0.00053207	-3.0934	-0.0019175	-2.235	-0.0013854	619.8686410709195	93.975	2.8634	94.136	92.286	95.15	0.16119					249	68	4	0	0	0	0.51307	2	9586	9550;9586		51.335	12.083	1	2724800	+		65720	28189	43678	43696	74635;74636	74636					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8693237304688	2	619.870697	1237.72684	0.87762	0.00054401	-2.8992	-0.0017971	-2.0216	-0.0012531	619.8687664431752	95.856	4.4531	96.019	95.112	99.565	0.16316					356	104	5	0	0	0	0.62081	2	9836	9836;9860		45.952	14.422	1	6574700	+		65721	28189	43678	43696	74637;74638	74637					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8692626953125	2	619.870697	1237.72684	-1.2246	-0.00075908	-1.0348	-0.00064142	-2.2593	-0.0014005	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.69914	4	9486	9486;9522;9546;9579		40.573	5.0535	1	3118800	+		65722	28189	43678	43696	74639;74640;74641;74642	74639					0.11748653699328315
WLARPRQRR	9	Unmodified	_WLARPRQRR_					0	0	0			REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	REV__ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8694458007812	2	619.870697	1237.72684	-1.2246	-0.00075909	-0.80723	-0.00050038	-2.0318	-0.0012595	619.8700795725922	95.916	5.2902	96.118	95.11	100.4	0.20242					391	123	5	0	0	0	0.58151	4	9872	9778;9872;9983;9995		47.916	16.386	1	6224400	+		65723	28189	43678	43696	74643;74644;74645;74646	74644					0.11748653699328315
WLARTLHLP	9	Unmodified	_WLARTLHLP_					0	0	0		ENSG00000175262|ENST00000377004|C1orf127	ENSG00000175262|ENST00000377004|C1orf127	ENSG00000175262|ENST00000377004|C1orf127	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.8306884765625	2	553.827101	1105.63965	1.7761	0.00098364	3.5243	0.0019519	5.3004	0.0029355	553.8288891800983	88.564	2.9184	88.49	86.689	89.607	-0.074005					225	68	4	0	0	0	0.78536	1	9086	9086		29.15	6.1071	1	1628400			65724	7001	43679	43697	74647	74647					0.09105434705088555
WLAVAGRPL	9	Unmodified	_WLAVAGRPL_					0	0	0		ENSG00000162344|ENST00000294312|FGF19	ENSG00000162344|ENST00000294312|FGF19	ENSG00000162344|ENST00000294312|FGF19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79522705078125	2	491.795269	981.575986	-1.4864	-0.00073099	2.6714	0.0013138	1.185	0.00058277	491.796445645416	53.266	2.6689	53.266	52.023	54.692	0					164	78	4	0	0	0	0.7932	1	4355	4355		25.45	2.4077	1	781720			65725	5679	43680	43698	74648	74648					0.08446074267999393
WLAVAGRPL	9	Unmodified	_WLAVAGRPL_					0	0	0		ENSG00000162344|ENST00000294312|FGF19	ENSG00000162344|ENST00000294312|FGF19	ENSG00000162344|ENST00000294312|FGF19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79571533203125	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.7932	1	4672	4672		25.45	1.2474	1	2075300			65726	5679	43680	43698	74649	74649					0.08446074267999393
WLAVLAGLFYL	11	Unmodified	_WLAVLAGLFYL_					0	0	0		nc|ENSG00000106384|Q86VF5-2|MOGAT3;ENSG00000106384|ENST00000223114|MOGAT3;nc|ENSG00000106384|Q86VF5-3|MOGAT3	nc|ENSG00000106384|Q86VF5-2|MOGAT3	nc|ENSG00000106384|Q86VF5-2|MOGAT3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	633.3692016601562	2	633.368267	1264.72198	1.4714	0.00093196	-0.095235	-6.0319E-05	1.3762	0.00087165	633.3680815405088	97.372	5.3576	97.603	96.652	102.01	0.23103					359	126	4	0	0	0	0.72739	1	9989	9989		31.955	2.7848	1	11430000			65727	2294	43681	43699	74650	74650					0.10020911993365189
WLAVLAGLFYL	11	Unmodified	_WLAVLAGLFYL_					0	0	0		nc|ENSG00000106384|Q86VF5-2|MOGAT3;ENSG00000106384|ENST00000223114|MOGAT3;nc|ENSG00000106384|Q86VF5-3|MOGAT3	nc|ENSG00000106384|Q86VF5-2|MOGAT3	nc|ENSG00000106384|Q86VF5-2|MOGAT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.369140625	2	633.368267	1264.72198	1.5936	0.0010093	-0.051742	-3.2772E-05	1.5418	0.00097656	633.3681450827713	95.612	2.2846	96.032	94.734	97.018	0.41963					200	55	4	0	0	0	0.68532	1	11367	11367		24.203	0	1	3838500			65728	2294	43681	43699	74651	74651					0.10020911993365189
WLCLLLLG	8	Unmodified	_WLCLLLLG_					0	0	0			REV__nc|ENSG00000120256|Q86VZ4-2|LRP11	REV__nc|ENSG00000120256|Q86VZ4-2|LRP11	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7770690917969	2	465.777699	929.540846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.079	1	80.216	79.716	80.716	0.13702								0	0	0	0.29725	1	7613	7613		24.504	0	1		+		65729	18403	43682	43700	74652	74652					0.07325695415840983
WLCLTLLL	8	Unmodified	_WLCLTLLL_					0	0	0		ENST00000372703.1_1_1:40975049-40975298:+|nuORF	ENST00000372703.1_1_1:40975049-40975298:+|nuORF	ENST00000372703.1_1_1:40975049-40975298:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7906799316406	2	487.790807	973.56706	-1.4694	-0.00071678	0.88841	0.00043336	-0.58103	-0.00028342	487.79124375404564	81.979	2.6757	82.037	80.602	83.277	0.057816					162	61	4	0	0	0	0.90024	1	8152	8152		39.021	5.5059	1	607090			65730	10713	43683	43701	74653	74653					0.07921964587308139
WLDVLPLRNL	10	Unmodified	_WLDVLPLRNL_					0	0	0		ENST00000477617.5_1_1:153940199-153940346:+|nuORF	ENST00000477617.5_1_1:153940199-153940346:+|nuORF	ENST00000477617.5_1_1:153940199-153940346:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8694458007812	2	619.866423	1237.71829	2.311	0.0014325	2.5285	0.0015673	4.8395	0.0029999	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.86218	2	10294	10200;10294		32.812	1.2826	1	4854700			65731	12357	43684	43702	74654;74655	74655					0.1089424221952413
WLDVLPLRNL	10	Unmodified	_WLDVLPLRNL_					0	0	0		ENST00000477617.5_1_1:153940199-153940346:+|nuORF	ENST00000477617.5_1_1:153940199-153940346:+|nuORF	ENST00000477617.5_1_1:153940199-153940346:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	619.8692626953125	2	619.866423	1237.71829	0.62565	0.00038782	4.2643	0.0026433	4.8899	0.0030311	619.8689531789835	95.909	5.2	95.956	95.006	100.21	0.046989					390	121	5	0	0	0	0.86218	1	10217	10217		32.812	1.2826	1	4779100			65732	12357	43684	43702	74656	74656					0.1089424221952413
WLDYRFPSRRR	11	Unmodified	_WLDYRFPSRRR_					0	0	0			REV__ENSG00000146109|ENST00000274849|ABT1	REV__ENSG00000146109|ENST00000274849|ABT1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.2406616210938	3	517.947898	1550.82186	0.68372	0.00035413	3.8418	0.0019898	4.5255	0.002344	517.9514751397031	32.542	0.64226	32.754	32.251	32.893	0.21168					29	14	3	0	0	0	0.18209	1	2271	2271		11.455	6.3122	1	308070	+		65733	19988	43685	43703	74657	74657					0.0684854237986201
WLFKHRRARFL	11	Unmodified	_WLFKHRRARFL_					0	0	0		nc|ENSG00000198689|Q92581-3|SLC9A6;nc|ENSG00000198689|Q92581-1|SLC9A6;ENSG00000198689|ENST00000630721|SLC9A6;nc|ENSG00000198689|Q92581|SLC9A6	nc|ENSG00000198689|Q92581-3|SLC9A6	nc|ENSG00000198689|Q92581-3|SLC9A6	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	510.63470458984375	3	510.636995	1528.88916	-0.66076	-0.00033741	-2.1432	-0.0010944	-2.804	-0.0014318	510.63450150479764	105.06	2.1188	105.06	104.28	106.4	0					172	50	6	0	0	0	0.84494	1	10754	10754		6.3209	0	1	638450			65734	8306	43686	43704	74658	74658					0.14586617381473843
WLFRVRSAV	9	Unmodified	_WLFRVRSAV_					0	0	0		ENST00000456075.5_1_22:22330448-22337138:-|nuORF;ENST00000430142.5_1_22:22330098-22337183:-|nuORF	ENST00000456075.5_1_22:22330448-22337138:-|nuORF	ENST00000456075.5_1_22:22330448-22337138:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3314208984375	2	567.33255	1132.65055	-1.3958	-0.00079187	-3.0898	-0.001753	-4.4856	-0.0025448	567.3306768153905	113.32	5.91	113.27	113.24	119.15	-0.044777					245	138	3	0	0	0	0.7932	1	12773	12773		23.042	2.2053	1	1691900			65735	11625	43687	43705	74659	74659					0.08952837079368692
WLFVLLTQLLK	11	Unmodified	_WLFVLLTQLLK_					0	0	0		nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000163539|O75122|CLASP2;ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2	nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000163539|O75122|CLASP2	nc|ENSG00000074054|Q7Z460-2|CLASP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	458.6236572265625	3	458.623358	1372.84824	0.76245	0.00034968	0.21434	9.8301E-05	0.97679	0.00044798	458.62336440411514	106.9	1.2829	106.99	106.6	107.88	0.091255					93	30	4	0	0	0	0.79224	1	11448	11448		12.957	3.7457	1	3364000			65736	1304;5821	43688	43706	74660	74660					0.17673418498657156
WLGESGESSPF	11	Unmodified	_WLGESGESSPF_					0	0	0			REV__ENST00000479270.5_1_3:153748128-153838919:-|nuORF	REV__ENST00000479270.5_1_3:153748128-153838919:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	598.3782348632812	2	598.266936	1194.51932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.633	1	21.679	21.179	22.179	0.045401								0	0	0	0.56276	1	600	600		25.574	2.0514	1		+		65737	27398	43689	43707	74661	74661					-0.07016062869865891
WLGGELKGKT	10	Unmodified	_WLGGELKGKT_					0	0	0		nc|ENSG00000205726|Q15811-13|ITSN1;nc|ENSG00000205726|Q15811-6|ITSN1;nc|ENSG00000205726|Q15811-5|ITSN1;nc|ENSG00000205726|Q15811-12|ITSN1;nc|ENSG00000205726|Q15811-11|ITSN1;nc|ENSG00000205726|Q15811-3|ITSN1;nc|ENSG00000205726|Q15811-10|ITSN1;nc|ENSG00000205726|Q15811-7|ITSN1;nc|ENSG00000205726|Q15811-2|ITSN1;CON__ENSEMBL:ENSBTAP00000001528;nc|ENSG00000205726|Q15811-4|ITSN1;nc|ENSG00000205726|Q15811-9|ITSN1;nc|ENSG00000205726|Q15811-8|ITSN1;ENSG00000205726|ENST00000381318|ITSN1	nc|ENSG00000205726|Q15811-13|ITSN1	nc|ENSG00000205726|Q15811-13|ITSN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	544.8079833984375	2	544.808574	1087.60259	0.15928	8.6776E-05	-3.8601	-0.002103	-3.7008	-0.0020162	544.8063612053201	24.541	0.98756	24.642	24.281	25.269	0.10045					123	49	4	0	0	0	0.86218	1	833	833		32.812	3.6424	1	1023100		+	65738	560	43690	43708	74662	74662					0.062297183686723656
WLHCQFHQ	8	Unmodified	_WLHCQFHQ_					0	0	0			REV__ENST00000328945.6_1_16:82033487-82033676:-|nuORF	REV__ENST00000328945.6_1_16:82033487-82033676:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	549.7530517578125	2	549.750536	1097.48652	-0.29927	-0.00016452	3.1687	0.001742	2.8695	0.0015775	549.7518890498923	31.61	0.38283	31.628	31.432	31.815	0.01836					13	8	2	0	0	0	0.88915	1	1719	1719		35.201	3.6709	1	29031	+		65739	25101	43691	43709	74663	74663					-0.05832503683041068
WLHRRVKRLER	11	Unmodified	_WLHRRVKRLER_					0	0	0		ENSG00000204482|ENST00000438075|LST1;nc|ENSG00000204482|O00453-11|LST1	ENSG00000204482|ENST00000438075|LST1	ENSG00000204482|ENST00000438075|LST1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.3011474609375	3	516.983054	1547.92733	-0.026157	-1.3522E-05	4.3734	0.002261	4.3472	0.0022474	516.9852081456607	56.941	0.69526	56.928	56.762	57.457	-0.012203					39	22	2	0	0	0	0.17729	1	5154	5154		29.551	21.871	1	150870			65740	8449	43692	43710	74664	74664					0.17528503296171039
WLHRRVKRLER	11	Unmodified	_WLHRRVKRLER_					0	0	0		ENSG00000204482|ENST00000438075|LST1;nc|ENSG00000204482|O00453-11|LST1	ENSG00000204482|ENST00000438075|LST1	ENSG00000204482|ENST00000438075|LST1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3009033203125	3	516.983054	1547.92733	0.1694	8.7575E-05	4.2333	0.0021885	4.4027	0.0022761	516.9851283180805	57.51	0.65758	57.481	57.076	57.733	-0.029865					27	20	2	0	0	0	0.18304	1	5258	5258		6.3209	0.90796	1	86030			65741	8449	43692	43710	74665	74665					0.17528503296171039
WLHRRVKRLER	11	Unmodified	_WLHRRVKRLER_					0	0	0		ENSG00000204482|ENST00000438075|LST1;nc|ENSG00000204482|O00453-11|LST1	ENSG00000204482|ENST00000438075|LST1	ENSG00000204482|ENST00000438075|LST1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	516.983054	1547.92733	-0.47638	-0.00024628	4.7078	0.0024339	4.2314	0.0021876	517.3200071075631	57.549	0.42909	57.532	57.257	57.686	-0.016426	0.052768	0.0002778	NaN	13.508	31	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135430			65742	8449	43692	43710							0.17528503296171039
WLHRRVKRLER	11	Unmodified	_WLHRRVKRLER_					0	0	0		ENSG00000204482|ENST00000438075|LST1;nc|ENSG00000204482|O00453-11|LST1	ENSG00000204482|ENST00000438075|LST1	ENSG00000204482|ENST00000438075|LST1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	516.983054	1547.92733	0.50592	0.00026155	3.0818	0.0015932	3.5877	0.0018548	516.984339243039	56.632	0.35364	57.192	56.876	57.23	0.55953	0.14211	-0.0022577	NaN	29.551	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146770			65743	8449	43692	43710							0.17528503296171039
WLIAVQLWPL	10	Unmodified	_WLIAVQLWPL_					0	0	0			REV__chr6:110442775-110446873|25|16.8|0.83|4.33|-|1|SLC22A16,SLC22A16|1	REV__chr6:110442775-110446873|25|16.8|0.83|4.33|-|1|SLC22A16,SLC22A16|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.8692016601562	2	619.868434	1237.72232	-0.2143	-0.00013284	1.7129	0.0010618	1.4986	0.00092895	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.86201	1	9372	9372		24.203	2.2429	1	1169100	+		65744	15868	43693	43711	74666	74666					0.11296331713219843
WLIAVQLWPL	10	Unmodified	_WLIAVQLWPL_					0	0	0			REV__chr6:110442775-110446873|25|16.8|0.83|4.33|-|1|SLC22A16,SLC22A16|1	REV__chr6:110442775-110446873|25|16.8|0.83|4.33|-|1|SLC22A16,SLC22A16|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	619.8695068359375	2	619.868434	1237.72232	0.85836	0.00053207	0.55683	0.00034516	1.4152	0.00087723	619.8686410709195	93.975	2.8634	94.136	92.286	95.15	0.16119					249	68	4	0	0	0	0.6398	1	9574	9574		47.916	7.1374	1	2724800	+		65745	15868	43693	43711	74667	74667					0.11296331713219843
WLIAVQLWPL	10	Unmodified	_WLIAVQLWPL_					0	0	0			REV__chr6:110442775-110446873|25|16.8|0.83|4.33|-|1|SLC22A16,SLC22A16|1	REV__chr6:110442775-110446873|25|16.8|0.83|4.33|-|1|SLC22A16,SLC22A16|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8694458007812	2	619.868434	1237.72232	1.2588	0.00078029	0.7161	0.00044389	1.9749	0.0012242	619.8687298121914	95.828	4.0726	96.233	95.298	99.371	0.40451					343	99	5	0	0	0	0.86452	3	11575	11575;11598;11647		30.504	4.9296	1	4742500	+		65746	15868	43693	43711	74668;74669;74670	74668					0.11296331713219843
WLIHKTTK	8	Unmodified	_WLIHKTTK_					0	0	0		nc|ENSG00000114956|Q16854-3|DGUOK;nc|ENSG00000114956|Q16854-5|DGUOK;ENSG00000114956|ENST00000264093|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8076171875	2	513.808377	1025.6022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.357	1	51.273	50.773	51.773	-0.084538								0	0	0	0.30079	1	4090	4090		20.947	0.4651	1				65747	2802	43694	43712	74671	74671					0.0904234343945518
WLKKVHLIM	9	Unmodified	_WLKKVHLIM_					0	0	0			REV__ENST00000517513.5_1_4:185553430-185553481:-|nuORF	REV__ENST00000517513.5_1_4:185553430-185553481:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	584.356201171875	2	584.357179	1166.69981	0.8115	0.00047421	-2.8807	-0.0016834	-2.0692	-0.0012091	584.3555753434755	92.506	2.8121	92.665	91.311	94.123	0.15874					185	66	3	0	0	0	0.7932	1	9311	9311		18.324	0.95945	1	722410	+		65748	28044	43695	43713	74672	74672					0.12312409043966
WLKLRFFCYFR	11	Unmodified	_WLKLRFFCYFR_					0	0	0			REV__ENST00000337198.9_1_8:103840196-103840244:-|nuORF	REV__ENST00000337198.9_1_8:103840196-103840244:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.949951171875	3	526.951592	1577.83295	0.20214	0.00010652	-3.9007	-0.0020555	-3.6985	-0.001949	526.949430793669	21.316	0.61271	20.688	20.339	20.952	-0.62835					41	16	3	0	0	0	0.80813	1	751	751		9.6461	0.43434	1	157960	+		65749	25203	43696	43714	74673	74673					0.06714228429814284
WLKQSRFYFKE	11	Unmodified	_WLKQSRFYFKE_					0	0	0		nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8;ENSG00000124721|ENST00000327475|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	nc|ENSG00000124721|Q96JB1-2|DNAH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	511.2755126953125	3	511.273388	1530.79833	0.65681	0.00033581	2.8536	0.001459	3.5104	0.0017948	511.27480455752027	37.156	0.65799	37.469	37.206	37.864	0.31312					49	15	5	0	0	0	0.75121	1	2969	2969		21.78	1.75	1	1705000			65750	3354	43697	43715	74674	74674					0.054166838227047265
WLLAAVATAA	10	Unmodified	_WLLAAVATAA_					0	0	0			REV__nc|ENSG00000196218|P21817-3|RYR1	REV__nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	493.7848815917969	2	493.78711	985.559667	-0.015829	-7.8162E-06	-4.22	-0.0020838	-4.2358	-0.0020916	493.78485178558	18.839	0.38292	18.21	18.018	18.401	-0.6296					12	8	2	0	0	0	0.86482	1	442	442		25.45	1.9275	1	85433	+		65751	23105	43698	43716	74675	74675					0.06630948311226348
WLLCISLP	8	Unmodified	_WLLCISLP_					0	0	0		ENST00000525312.1_1_11:12886306-12886516:+|nuORF	ENST00000525312.1_1_11:12886306-12886516:+|nuORF	ENST00000525312.1_1_11:12886306-12886516:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.766845703125	2	472.767332	943.52011	-1.1355	-0.00053681	0.9406	0.00044468	-0.19486	-9.2123E-05	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.87276	1	7820	7820		29.842	6.3188	1	292450			65752	13235	43699	43717	74676	74676					0.04609105036172423
WLLCISLP	8	Unmodified	_WLLCISLP_					0	0	0		ENST00000525312.1_1_11:12886306-12886516:+|nuORF	ENST00000525312.1_1_11:12886306-12886516:+|nuORF	ENST00000525312.1_1_11:12886306-12886516:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.767578125	2	472.767332	943.52011	-0.93004	-0.00043969	0.65739	0.00031079	-0.27265	-0.0001289	472.7676617903916	83.882	4.0148	84.047	82.72	86.735	0.1651					253	93	4	0	0	0	0.87807	1	8214	8214		31.579	7.3761	1	526610			65753	13235	43699	43717	74677	74677					0.04609105036172423
WLLKRGSA	8	Unmodified	_WLLKRGSA_					0	0	0			REV__ENST00000566733.2_1_6:3908443-3908599:-|nuORF	REV__ENST00000566733.2_1_6:3908443-3908599:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.77728271484375	2	465.779619	929.544686	-1.0371	-0.00048307	-3.4618	-0.0016124	-4.4989	-0.0020955	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.884	2	7782	7782;7987		33.516	9.0116	1	1384500	+		65754	28873	43700	43718	74678;74679	74678					0.07709501233898663
WLLLCPLS	8	Unmodified	_WLLLCPLS_					0	0	0		ENSG00000184647|ENST00000328655|PRSS55	ENSG00000184647|ENST00000328655|PRSS55	ENSG00000184647|ENST00000328655|PRSS55	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.76715087890625	2	472.767332	943.52011	0.74188	0.00035074	-0.87317	-0.00041281	-0.13129	-6.2069E-05	472.76687263466727	83.933	4.0633	83.864	82.673	86.736	-0.069313					264	94	4	0	0	0	0.89457	1	8599	8599		37.028	1.4102	1	547170			65755	7633	43701	43719	74680	74680					0.046091050361496855
WLLRLRRRRGP	11	Unmodified	_WLLRLRRRRGP_					0	0	0			REV__ENST00000381340.7_1_12:26985723-26986077:-|nuORF	REV__ENST00000381340.7_1_12:26985723-26986077:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.9847717285156	3	493.647894	1477.92185	-0.69439	-0.00034278	4.3171	0.0021311	3.6227	0.0017883	493.64986615428916	44.451	1.6231	44.46	43.725	45.348	0.0084534					108	38	3	0	0	0	0.84494	1	3119	3119		6.3209	0.31984	1	353910	+		65756	25963	43702	43720	74681	74681					0.20200824504308912
WLLRNVTLPEI	11	Unmodified	_WLLRNVTLPEI_					0	0	0		ENSG00000141429|ENST00000269195|GALNT1	ENSG00000141429|ENST00000269195|GALNT1	ENSG00000141429|ENST00000269195|GALNT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9327392578125	3	451.934484	1352.78162	-1.7712	-0.00080047	-2.2412	-0.0010129	-4.0124	-0.0018134	451.93337319207365	98.823	2.3562	99.009	97.542	99.898	0.18581					140	54	3	0	0	0	0.74405	1	10217	10217		23.378	1.5975	1	334040			65757	4497	43703	43721	74682	74682					0.11934182936761317
WLLSCLPL	8	Unmodified	_WLLSCLPL_					0	0	0			REV__ENST00000300692.8_1_11:118210185-118211143:-|nuORF	REV__ENST00000300692.8_1_11:118210185-118211143:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.7669677734375	2	472.767332	943.52011	0.62555	0.00029574	-0.79766	-0.00037711	-0.17211	-8.1367E-05	472.76693013143205	83.893	4.3195	84.04	82.42	86.74	0.14794					229	100	4	0	0	0	0.90024	1	8242	8242		39.021	0.21535	1	508030	+		65758	24753	43704	43722	74683	74683					0.046091050361496855
WLLVFVLAFGD	11	Unmodified	_WLLVFVLAFGD_					0	0	0			REV__ENST00000515710.1_1_5:14441357-14465986:+|nuORF	REV__ENST00000515710.1_1_5:14441357-14465986:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.3602294921875	2	640.357899	1278.70125	-0.067952	-4.3514E-05	1.5787	0.0010109	1.5108	0.00096742	640.3588051394819	99.66	2.7583	99.701	98.786	101.54	0.0411					183	64	4	0	0	0	0.7342	1	10710	10710		25.574	1.3713	1	640120	+		65759	28037	43705	43723	74684	74684					0.0730432161369663
WLLVGLVM	8	Unmodified	_WLLVGLVM_					0	0	0			REV__ENSG00000108846|ENST00000285238|ABCC3	REV__ENSG00000108846|ENST00000285238|ABCC3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	465.7774963378906	2	465.777699	929.540846	-1.2002	-0.00055902	0.93559	0.00043578	-0.26459	-0.00012324	465.7780695402686	82.018	7.4591	82.018	78.926	86.386	0					426	217	4	0	0	0	0.84567	1	7685	7685		24.504	2.5441	1	683640	+		65760	17737	43706	43724	74685	74685					0.07325695415829614
WLLVGLVM	8	Unmodified	_WLLVGLVM_					0	0	0			REV__ENSG00000108846|ENST00000285238|ABCC3	REV__ENSG00000108846|ENST00000285238|ABCC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	465.7775573730469	2	465.777699	929.540846	-0.11871	-5.5291E-05	-0.15438	-7.1906E-05	-0.27308	-0.0001272	465.7775374012965	82.064	6.1943	82.13	80.426	86.62	0.06591					388	144	4	0	0	0	0.84567	4	8035	8035;8130;8189;8213		24.504	6.1796	1	1083800	+		65761	17737	43706	43724	74686;74687;74688;74689	74686					0.07325695415829614
WLLVGLVM	8	Unmodified	_WLLVGLVM_					0	0	0			REV__ENSG00000108846|ENST00000285238|ABCC3	REV__ENSG00000108846|ENST00000285238|ABCC3	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	465.7784118652344	2	465.777699	929.540846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.037	1	79.98	79.48	80.48	-0.056503								0	0	0	0.2945	1	8030	8030		33.493	8.989	1		+		65762	17737	43706	43724	74690	74690					0.07325695415829614
WLLVGLVM	8	Unmodified	_WLLVGLVM_					0	0	0			REV__ENSG00000108846|ENST00000285238|ABCC3	REV__ENSG00000108846|ENST00000285238|ABCC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7774658203125	2	465.777699	929.540846	-1.0371	-0.00048307	0.66012	0.00030747	-0.37701	-0.0001756	465.7779104259745	82.027	7.7656	82.178	78.244	86.01	0.15092					424	203	4	0	0	0	0.91333	1	7963	7963		43.626	10.133	1	1384500	+		65763	17737	43706	43724	74691	74691					0.07325695415829614
WLLVGLVM	8	Unmodified	_WLLVGLVM_					0	0	0			REV__ENSG00000108846|ENST00000285238|ABCC3	REV__ENSG00000108846|ENST00000285238|ABCC3	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	465.7777404785156	2	465.777699	929.540846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.223	1	80.36	79.86	80.86	0.13702								0	0	0	0.29725	1	7629	7629		24.504	1.9244	1		+		65764	17737	43706	43724	74692	74692					0.07325695415829614
WLLVGLVM	8	Unmodified	_WLLVGLVM_					0	0	0			REV__ENSG00000108846|ENST00000285238|ABCC3	REV__ENSG00000108846|ENST00000285238|ABCC3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	465.7773132324219	2	465.777699	929.540846	-1.5315	-0.00071332	1.2587	0.00058629	-0.27274	-0.00012704	465.77817408341514	82.043	4.7979	82.157	80.918	85.716	0.11426					195	111	2	0	0	0	0.84567	2	7752	7752;7968		43.626	4.8199	1	991370	+		65765	17737	43706	43724	74693;74694	74693					0.07325695415829614
WLLVGLVM	8	Unmodified	_WLLVGLVM_					0	0	0			REV__ENSG00000108846|ENST00000285238|ABCC3	REV__ENSG00000108846|ENST00000285238|ABCC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	465.7777404785156	2	465.777699	929.540846	-0.69238	-0.0003225	0.57321	0.00026699	-0.11917	-5.5507E-05	465.77785041388756	81.764	4.6012	82.191	80.811	85.412	0.42646					260	112	3	0	0	0	0.84567	1	9611	9611		24.504	0.30126	1	927810	+		65766	17737	43706	43724	74695	74695					0.07325695415829614
WLLVGLVM	8	Unmodified	_WLLVGLVM_					0	0	0			REV__ENSG00000108846|ENST00000285238|ABCC3	REV__ENSG00000108846|ENST00000285238|ABCC3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.7779846191406	2	465.777699	929.540846	-0.22002	-0.00010248	0.12063	5.6185E-05	-0.099392	-4.6295E-05	465.77762910010483	81.797	5.0901	82.297	80.626	85.716	0.49967					304	124	3	0	0	0	0.88393	1	9446	9446		33.493	8.0428	1	1042300	+		65767	17737	43706	43724	74696	74696					0.07325695415829614
WLLVMGLV	8	Unmodified	_WLLVMGLV_					0	0	0		ENST00000311066.9_1_1:14113167-14113317:+|nuORF	ENST00000311066.9_1_1:14113167-14113317:+|nuORF	ENST00000311066.9_1_1:14113167-14113317:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	465.77740478515625	2	465.777699	929.540846	-0.087401	-4.0709E-05	-0.21078	-9.8178E-05	-0.29819	-0.00013889	465.77748301270384	81.969	5.5389	82.027	80.778	86.317	0.057808					355	127	4	0	0	0	0.88393	1	8073	8073		33.493	0	1	1330000			65768	9919	43707	43725	74697	74697					0.07325695415818245
WLLVWPMVRL	10	Unmodified	_WLLVWPMVRL_					0	0	0		ENST00000309993.2_1_3:135914062-135914104:-|nuORF	ENST00000309993.2_1_3:135914062-135914104:-|nuORF	ENST00000309993.2_1_3:135914062-135914104:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2574157714844	3	438.258133	1311.75257	0.097654	4.2798E-05	-0.99821	-0.00043747	-0.90055	-0.00039468	438.25764913166114	29.606	0.75126	29.719	29.373	30.124	0.11225					122	37	5	0	0	0	0.86587	1	1274	1274		29.17	1.5261	1	517110			65769	9905	43708	43726	74698	74698					0.10916367106756297
WLLWRGPS	8	Unmodified	_WLLWRGPS_					0	0	0			REV__ENST00000508303.5_1_12:112186258-112194701:+|nuORF	REV__ENST00000508303.5_1_12:112186258-112194701:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.7822570800781	2	507.779619	1013.54469	0.88572	0.00044975	4.2425	0.0021543	5.1282	0.002604	507.78156278549454	48.627	0.55497	49.532	49.25	49.805	0.90424					34	13	3	0	0	0	0.67263	1	4712	4712		68.485	2.0554	1	1346600	+		65770	27923	43709	43727	74699	74699					0.03845501233899995
WLMKRWHKIEW	11	Unmodified	_WLMKRWHKIEW_					0	0	0			REV__ENSG00000141371|ENST00000269127|CHCT1	REV__ENSG00000141371|ENST00000269127|CHCT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.2938842773438	3	538.290496	1611.84966	0.8827	0.00047515	3.8934	0.0020958	4.7761	0.0025709	538.2925277299113	59.452	0.73342	59.42	59.111	59.844	-0.031685					54	17	4	0	0	0	0.86672	1	5583	5583		4.8861	1.4774	1	673760	+		65771	19677	43710	43728	74700	74700					0.06820729315745666
WLMKWKFSGEN	11	Unmodified	_WLMKWKFSGEN_					0	0	0			REV__ENSG00000112761|ENST00000368666|CCN6	REV__ENSG00000112761|ENST00000368666|CCN6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	475.90423583984375	3	475.904307	1424.69109	-0.26265	-0.000125	-0.024121	-1.1479E-05	-0.28677	-0.00013648	475.9043000262153	27.433	0.5927	27.394	27.165	27.757	-0.038523					31	13	3	0	0	0	0.78391	1	1311	1311		14.694	0	1	59665	+		65772	17963	43711	43729	74701	74701					-0.004266093831574835
WLNSVLLPL	9	Unmodified	_WLNSVLLPL_					0	0	0		ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	ENSG00000130943|ENST00000253255|PKDREJ	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	527.817138671875	2	527.81841	1053.62227	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.37	1	119.37	118.87	119.87	0								0	0	0	0.36148	1	12113	12113		11.511	0.64546	1				65773	3698	43712	43730	74702	74702					0.09760094379430484
WLPLAQVR	8	Unmodified	_WLPLAQVR_					0	0	0		ENST00000378536.4_1_1:2240511-2240694:+|nuORF	ENST00000378536.4_1_1:2240511-2240694:+|nuORF	ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7954406738281	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.89457	1	3793	3793		37.028	1.8278	1	1240000			65774	10868	43713	43731	74703	74703					0.08446074267988024
WLPLAQVR	8	Unmodified	_WLPLAQVR_					0	0	0		ENST00000378536.4_1_1:2240511-2240694:+|nuORF	ENST00000378536.4_1_1:2240511-2240694:+|nuORF	ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.79595947265625	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.86791	1	3645	3645		28.254	1.4582	1	1219600			65775	10868	43713	43731	74704	74704					0.08446074267988024
WLPLAQVR	8	Unmodified	_WLPLAQVR_					0	0	0		ENST00000378536.4_1_1:2240511-2240694:+|nuORF	ENST00000378536.4_1_1:2240511-2240694:+|nuORF	ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79541015625	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.86288	1	3888	3888		26.796	0.10319	1	1346800			65776	10868	43713	43731	74705	74705					0.08446074267988024
WLPLARLKDTP	11	Unmodified	_WLPLARLKDTP_					0	0	0			REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	REV__ENST00000530079.5_1_16:70030360-70072929:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2570495605469	3	437.259079	1308.75541	-1.4866	-0.00065002	-2.4798	-0.0010843	-3.9663	-0.0017343	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.72892	1	10354	10354		26.75	0.85799	1	981430	+		65777	28277	43714	43732	74706	74706					0.11337913765282792
WLPLQPRVP	9	Unmodified	_WLPLQPRVP_					0	0	0		nc|ENSG00000142765|Q8IYJ3-2|SYTL1;ENSG00000142765|ENST00000616558|SYTL1	nc|ENSG00000142765|Q8IYJ3-2|SYTL1	nc|ENSG00000142765|Q8IYJ3-2|SYTL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.3323974609375	2	553.329476	1104.6444	1.2853	0.00071117	3.9606	0.0021915	5.2459	0.0029027	553.3315309725969	96.788	2.1424	96.836	96.312	98.454	0.047798					152	49	5	0	0	0	0.77546	1	10300	10300		31.955	2.8053	1	4524400			65778	4583	43715	43733	74707	74707					0.09626318847836046
WLPPGGPGRR	10	Unmodified	_WLPPGGPGRR_					0	0	0			REV__ENSG00000255181|ENST00000542437|CCDC166	REV__ENSG00000255181|ENST00000542437|CCDC166	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.83984375	2	546.8067	1091.59885	1.2642	0.00069127	1.6479	0.00090111	2.9121	0.0015924	546.8079139933258	100.88	0.61272	100.92	100.61	101.22	0.046356					23	14	2	0	0	0	0.37624	1	10864	10864		20.947	0	1	126960	+		65779	23894	43716	43734	74708	74708					0.05671093385490167
WLPRIPAS	8	Unmodified	_WLPRIPAS_					0	0	0			REV__ENST00000478468.1_1_2:9789013-9789205:+|nuORF	REV__ENST00000478468.1_1_2:9789013-9789205:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	470.2725524902344	2	470.27417	938.533787	-1.0259	-0.00048243	-3.3077	-0.0015555	-4.3335	-0.0020379	470.27263416214146	92.531	3.2683	92.531	91.425	94.693	0					153	75	5	0	0	0	0.884	1	9068	9068		33.516	0.022601	1	1224900	+		65780	27382	43717	43735	74709	74709					0.062060988596158495
WLPRNLIA	8	Unmodified	_WLPRNLIA_					0	0	0			REV__ENST00000411526.5_1_7:154736168-154736312:+|nuORF	REV__ENST00000411526.5_1_7:154736168-154736312:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7945861816406	2	491.795269	981.575986	0.42504	0.00020903	0.32902	0.00016181	0.75406	0.00037084	491.7954861357076	59.345	2.1315	59.459	58.989	61.12	0.11396					113	74	3	0	0	0	0.82464	1	5064	5064		21.702	1.7056	1	139720	+		65781	26368	43718	43736	74710	74710					0.08446074267988024
WLPSLLLLLEG	11	Unmodified	_WLPSLLLLLEG_					0	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.3878173828125	2	627.378832	1252.74311	0.9795	0.00061452	4.2538	0.0026687	5.2333	0.0032833	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.72918	1	13025	13025		26.693	1.1189	1	19815000			65782	8803	43719	43737	74711	74711					0.12684877302240238
WLPSLLLLLEG	11	Unmodified	_WLPSLLLLLEG_					0	0	0		ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1	ENSG00000242866|ENST00000450892|STRC	ENSG00000242866|ENST00000450892|STRC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3838500976562	2	627.378832	1252.74311	6.5824	0.0041297	-1.3345	-0.00083721	5.248	0.0032925	627.3778931643454	110.88	0.7373	110.93	110.56	111.3	0.049095					56	30	2	0	0	0	0.75495	1	13500	13500		20.947	2.6848	1	362180			65783	8803	43719	43737	74712	74712					0.12684877302240238
WLQGLRPL	8	Unmodified	_WLQGLRPL_					0	0	0		ENSG00000237441|ENST00000497454|RGL2;ENST00000483151.5_1_6:33261379-33266279:-|nuORF;nc|ENSG00000237441|O15211-2|RGL2	ENSG00000237441|ENST00000497454|RGL2	ENSG00000237441|ENST00000497454|RGL2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7957763671875	2	491.795269	981.575986	-1.7961	-0.00088329	2.9764	0.0014638	1.1803	0.00058047	491.7966581870457	51.567	1.6539	51.579	50.697	52.351	0.012436					117	46	3	0	0	0	0.86288	1	4415	4415		26.796	0	1	354980			65784	8759	43720	43738	74713	74713					0.08446074267999393
WLQKLSKHKT	10	Unmodified	_WLQKLSKHKT_					0	0	0		ENSG00000171819|ENST00000376819|ANGPTL7	ENSG00000171819|ENST00000376819|ANGPTL7	ENSG00000171819|ENST00000376819|ANGPTL7	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.30572509765625	3	423.587307	1267.74009	0.94645	0.00040091	0.18841	7.9808E-05	1.1349	0.00048071	423.9216046677162	23.076	0.39271	22.657	22.457	22.85	-0.41879					16	9	3	0	0	0	0.37624	1	996	996		6.3209	4.434	1	58514			65785	6716	43721	43739	74714	74714					0.11693046968093768
WLQRQRREWVR	11	Unmodified	_WLQRQRREWVR_					0	0	0			REV__chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	REV__chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3064575195312	3	538.302563	1611.88586	3.5626	0.0019178	1.9931	0.0010729	5.5557	0.0029906	538.3036154864011	110.09	1.3352	110.06	109.77	111.11	-0.027641					122	44	4	0	0	0	0.89761	1	12184	12184		2.8518	0.16375	1	461650	+		65786	15700	43722	43740	74715	74715					0.10439322536808504
WLQRQRREWVR	11	Unmodified	_WLQRQRREWVR_					0	0	0			REV__chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	REV__chr19:39435708-39435790|14|618.0|0.08|12.92|-|1|RPS16,None|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3047485351562	3	538.302563	1611.88586	5.1632	0.0027793	0.36678	0.00019744	5.53	0.0029768	538.3026802325604	110.18	0.55859	110.25	110.05	110.61	0.067993					28	18	2	0	0	0	0.8498	1	13382	13382		6.001	0	1	463850	+		65787	15700	43722	43740	74716	74716					0.10439322536808504
WLQRWTRFKYR	11	Unmodified	_WLQRWTRFKYR_					0	0	0			REV__nc|ENSG00000239900|P30566-2|ADSL	REV__nc|ENSG00000239900|P30566-2|ADSL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.6394653320312	3	547.303793	1638.88955	3.5008	0.001916	-0.66625	-0.00036464	2.8345	0.0015514	547.303322124528	110.68	1.6744	110.66	109.83	111.51	-0.026314					149	56	4	0	0	0	0.89497	3	12237	12237;12253;12266		3.026	2.6546	1	371610	+		65788	23808	43723	43741	74717;74718;74719	74717					0.09565992310649563
WLQRWTRFKYR	11	Unmodified	_WLQRWTRFKYR_					0	0	0			REV__nc|ENSG00000239900|P30566-2|ADSL	REV__nc|ENSG00000239900|P30566-2|ADSL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	547.6399536132812	3	547.303793	1638.88955	1.2663	0.00069306	1.326	0.00072575	2.5924	0.0014188	547.3043895764332	110.6	1.7189	110.63	109.96	111.68	0.031746					144	61	4	0	0	0	0.89215	2	12109	12109;12132		3.2113	0.18535	1	383470	+		65789	23808	43723	43741	74720;74721	74720					0.09565992310649563
WLRALGAVP	9	Unmodified	_WLRALGAVP_					0	0	0		ENST00000331134.10_1_17:79525220-79525361:-|nuORF	ENST00000331134.10_1_17:79525220-79525361:-|nuORF	ENST00000331134.10_1_17:79525220-79525361:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7958068847656	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.78058	1	4274	4274		30.504	2.2494	1	1111900			65790	10117	43724	43742	74722	74722					0.08446074267988024
WLRPVIQA	8	Unmodified	_WLRPVIQA_					0	0	0		ENST00000331573.7_1_21:40555680-40555749:-|nuORF	ENST00000331573.7_1_21:40555680-40555749:-|nuORF	ENST00000331573.7_1_21:40555680-40555749:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7975158691406	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.421	1	60.429	59.929	60.929	0.0081177								0	0	0	0.30252	1	5232	5232		19.36	0	1				65791	10129	43725	43743	74723	74723					0.08446074267988024
WLRRARARPT	10	Unmodified	_WLRRARARPT_					0	0	0			REV__nc|ENSG00000179698|A6NE52-2|WDR97	REV__nc|ENSG00000179698|A6NE52-2|WDR97	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.8822021484375	2	641.883804	1281.75306	-0.050338	-3.2311E-05	-1.9563	-0.0012557	-2.0066	-0.001288	641.8823954757748	95.916	2.4458	95.982	94.508	96.954	0.06591					198	57	4	0	0	0	0.86218	1	10099	10099		32.812	1.2826	1	1572400	+		65792	22350	43726	43744	74724	74724					0.1234492287080684
WLRRTKPSKRQ	11	Unmodified	_WLRRTKPSKRQ_					0	0	0		ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	ENSG00000112159|ENST00000369393|MDN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	486.2939147949219	3	485.960026	1454.85825	0.24146	0.00011734	-0.45225	-0.00021978	-0.21079	-0.00010244	486.29439869258147	15.685	0.22542	15.086	14.986	15.212	-0.59873					16	8	3	0	0	0	0.76251	1	41	41		19.263	2.0959	1	48778			65793	2636	43727	43745	74725	74725					0.14901419276588967
WLRSRWLKSTS	11	Unmodified	_WLRSRWLKSTS_					0	0	0			REV__ENST00000254109.9_1_16:31712056-31713112:+|nuORF	REV__ENST00000254109.9_1_16:31712056-31713112:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.2651672363281	3	473.933366	1418.77827	-0.31687	-0.00015017	-2.7388	-0.001298	-3.0557	-0.0014482	473.93207703630236	16.011	0.19575	15.931	15.841	16.036	-0.080016					11	7	2	0	0	0	0.77205	1	75	75		17.167	3.0807	1	69379	+		65794	24308	43728	43746	74726	74726					0.08562932882728091
WLSIPLCL	8	Unmodified	_WLSIPLCL_					0	0	0		ENSG00000255307|ENST00000530810|OR52B2	ENSG00000255307|ENST00000530810|OR52B2	ENSG00000255307|ENST00000530810|OR52B2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	472.76708984375	2	472.767332	943.52011	-1.568	-0.00074129	1.3612	0.00064352	-0.20681	-9.7771E-05	472.7679689156673	83.842	3.9515	83.98	82.759	86.711	0.13811					243	91	4	0	0	0	0.92176	1	8129	8129		46.766	6.1938	1	404330			65795	8884	43729	43747	74727	74727					0.046091050361496855
WLTNAMSDF	9	Unmodified	_WLTNAMSDF_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	542.7415771484375	2	542.742042	1083.46953	0.18757	0.0001018	-3.9174	-0.0021262	-3.7299	-0.0020244	542.7398105842881	28.773	0.69491	28.804	28.436	29.131	0.030947					49	24	3	0	0	0	0.76255	1	1389	1389		35.618	0.41757	1	71107			65796	1581	43730	43748	74728	74728					-0.06886469079495328
WLTRVRVC	8	Unmodified	_WLTRVRVC_					0	0	0			REV__ENST00000360472.8_1_1:160183409-160183475:+|nuORF	REV__ENST00000360472.8_1_1:160183409-160183475:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.793701171875	2	516.792204	1031.56985	1.5571	0.00080467	0.88181	0.00045571	2.4389	0.0012604	516.7926038279933	88.583	4.2619	88.509	86.689	90.95	-0.074005					270	100	4	0	0	0	0.87922	1	9163	9163		31.955	6.3808	1	834930	+		65797	25480	43731	43749	74729	74729					0.055332327648102364
WLVLLISM	8	Unmodified	_WLVLLISM_					0	0	0		ENST00000403332.2_1_6:129478670-129479855:-|nuORF;ENSG00000107779|ENST00000372037|BMPR1A	ENST00000403332.2_1_6:129478670-129479855:-|nuORF	ENST00000403332.2_1_6:129478670-129479855:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	487.79058837890625	2	487.790807	973.56706	-0.085473	-4.1693E-05	-0.2767	-0.00013497	-0.36217	-0.00017666	487.79061060078965	84.42	5.5143	84.487	83.04	88.554	0.067169					392	127	4	0	0	0	0.89457	1	8482	8482		37.028	3.5355	1	1889700			65798	2368	43732	43750	74730	74730					0.07921964587319508
WLVLLISM	8	Unmodified	_WLVLLISM_					0	0	0		ENST00000403332.2_1_6:129478670-129479855:-|nuORF;ENSG00000107779|ENST00000372037|BMPR1A	ENST00000403332.2_1_6:129478670-129479855:-|nuORF	ENST00000403332.2_1_6:129478670-129479855:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	487.7906494140625	2	487.790807	973.56706	0.84663	0.00041298	-1.2469	-0.00060822	-0.40027	-0.00019525	487.79014007540667	84.403	5.4336	84.334	83.046	88.48	-0.069313					371	126	4	0	0	0	0.86791	1	8615	8615		28.254	0.37203	1	2238600			65799	2368	43732	43750	74731	74731					0.07921964587319508
WLVLLISM	8	Unmodified	_WLVLLISM_					0	0	0		ENST00000403332.2_1_6:129478670-129479855:-|nuORF;ENSG00000107779|ENST00000372037|BMPR1A	ENST00000403332.2_1_6:129478670-129479855:-|nuORF	ENST00000403332.2_1_6:129478670-129479855:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	487.7905578613281	2	487.790807	973.56706	-1.3135	-0.00064074	0.91911	0.00044833	-0.39444	-0.0001924	487.7911810378426	84.226	5.3955	84.285	82.558	87.954	0.05925					342	124	4	0	0	0	0.86791	2	8407	8407;8453		54.765	24.261	1	2239000			65800	2368	43732	43750	74732;74733	74732					0.07921964587319508
WLVLLISM	8	Unmodified	_WLVLLISM_					0	0	0		ENST00000403332.2_1_6:129478670-129479855:-|nuORF;ENSG00000107779|ENST00000372037|BMPR1A	ENST00000403332.2_1_6:129478670-129479855:-|nuORF	ENST00000403332.2_1_6:129478670-129479855:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	487.7906799316406	2	487.790807	973.56706	-0.70733	-0.00034503	0.27543	0.00013435	-0.4319	-0.00021068	487.79087500691355	84.084	4.2295	84.251	82.806	87.035	0.16695					323	98	4	0	0	0	0.89457	1	8059	8059		37.028	1.4102	1	2348200			65801	2368	43732	43750	74734	74734					0.07921964587319508
WLVPLVRTLL	10	Unmodified	_WLVPLVRTLL_					0	0	0		nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2;ENSG00000160796|ENST00000450053|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.92987060546875	3	403.928781	1208.76451	0.41682	0.00016837	1.3719	0.00055414	1.7887	0.0007225	403.92919444194524	46.164	0.84489	46.636	46.254	47.099	0.47139					60	20	4	0	0	0	0.888	1	4294	4294		11.097	0.99287	1	1771500			65802	5607	43733	43751	74735	74735					0.1684830712160874
WLVPLVRTLL	10	Unmodified	_WLVPLVRTLL_					0	0	0		nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2;ENSG00000160796|ENST00000450053|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	403.9297790527344	3	403.928781	1208.76451	-0.87887	-0.000355	2.7255	0.0011009	1.8467	0.00074592	403.9297749934075	46.008	1.1325	46.904	46.447	47.58	0.89542					87	27	4	0	0	0	0.84816	1	4348	4348		17.468	0.30126	1	2092900			65803	5607	43733	43751	74736	74736					0.1684830712160874
WLVVAKPA	8	Unmodified	_WLVVAKPA_					0	0	0			REV__ENSG00000184144|ENST00000331830|CNTN2	REV__ENSG00000184144|ENST00000331830|CNTN2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	442.2735595703125	2	442.273638	882.532724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.957	1	55.947	55.447	56.447	-0.010136								0	0	0	0.30252	1	5009	5009		19.36	0	1		+		65804	22646	43734	43752	74737	74737					0.08675884490708086
WLVVGGDR	8	Unmodified	_WLVVGGDR_					0	0	0			REV__ENST00000295404.9_1_19:50200719-50213852:+|nuORF	REV__ENST00000295404.9_1_19:50200719-50213852:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	451.24847412109375	2	451.248152	900.481751	-1.2852	-0.00057995	3.0375	0.0013707	1.7523	0.0007907	451.2493154558184	65.489	1.09	65.618	64.991	66.081	0.12995					90	51	3	0	0	0	0.84341	1	5817	5817		24.203	1.1603	1	1216500	+		65805	24699	43735	43753	74738	74738					0.02752935445869298
WLVVTTPE	8	Unmodified	_WLVVTTPE_					0	0	0			REV__ENST00000591893.1_1_17:73781331-73781418:-|nuORF	REV__ENST00000591893.1_1_17:73781331-73781418:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.75579833984375	2	472.758018	943.501483	-0.42571	-0.00020126	-3.5544	-0.0016804	-3.9801	-0.0018816	472.756162330355	25.453	0.69131	25.416	25.118	25.81	-0.037176					45	20	3	0	0	0	0.89457	1	1034	1034		37.028	1.8278	1	115270	+		65806	29206	43736	43754	74739	74739					0.027472666659605238
WLWIRLVYPLL	11	Unmodified	_WLWIRLVYPLL_					0	0	0			REV__ENST00000367742.7_1_1:171561357-171561441:+|nuORF	REV__ENST00000367742.7_1_1:171561357-171561441:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.2980651855469	3	491.298986	1470.87513	-0.62705	-0.00030807	0.48421	0.00023789	-0.14284	-7.0176E-05	491.2990736869804	110.17	1.4737	110.28	110.04	111.52	0.11659					96	54	2	0	0	0	0.80593	1	11920	11920		10.104	1.3046	1	713080	+		65807	25577	43737	43755	74740	74740					0.15852527109836956
WLWLARRLLP	10	Unmodified	_WLWLARRLLP_					0	0	0			REV__ENST00000241041.7_1_11:45931313-45931427:-|nuORF	REV__ENST00000241041.7_1_11:45931313-45931427:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	441.9402160644531	3	441.939792	1322.79755	-1.4729	-0.00065094	1.5031	0.00066429	0.030197	1.3345E-05	441.94033054697593	56.641	1.0598	56.713	56.56	57.62	0.071835					108	50	3	0	0	0	0.8486	1	4790	4790		18.262	1.0953	1	756750	+		65808	24227	43738	43756	74741	74741					0.14905933964291762
WLWLARRLLP	10	Unmodified	_WLWLARRLLP_					0	0	0			REV__ENST00000241041.7_1_11:45931313-45931427:-|nuORF	REV__ENST00000241041.7_1_11:45931313-45931427:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	441.9400939941406	3	441.939792	1322.79755	-0.69974	-0.00030924	0.7315	0.00032328	0.031761	1.4037E-05	441.9399909148648	56.856	0.75961	56.83	56.632	57.391	-0.026108					86	36	3	0	0	0	0.8486	1	4808	4808		18.262	0.42894	1	338630	+		65809	24227	43738	43756	74742	74742					0.14905933964291762
WMFWSRYLLQR	11	Unmodified	_WMFWSRYLLQR_					0	0	0			REV__nc|ENSG00000198089|A8K8P3-4|SFI1	REV__nc|ENSG00000198089|A8K8P3-4|SFI1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	529.6071166992188	3	529.274734	1584.80237	0.087973	4.6562E-05	-3.0282	-0.0016028	-2.9402	-0.0015562	529.6074494906942	71.247	0.96676	71.285	70.943	71.91	0.038055					159	46	4	0	0	0	0.78083	1	6844	6844		15.337	0.0043666	1	1379900	+		65810	30144	43739	43757	74743	74743					0.03336450044776029
WMHPFWWFEKR	11	Unmodified	_WMHPFWWFEKR_					0	0	0			REV__ENSG00000166507|ENST00000309979|NDST2	REV__ENSG00000166507|ENST00000309979|NDST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	550.9342041015625	3	550.599329	1648.77616	0.48693	0.0002681	2.7998	0.0015416	3.2867	0.0018097	550.6008568284933	18.08	0.56966	18.156	17.968	18.538	0.075441					48	16	5	0	0	0	0.8498	1	252	252		6.001	2.5923	1	241290	+		65811	21299	43740	43758	74744	74744					-0.022278191267560032
WMHPFWWFEKR	11	Unmodified	_WMHPFWWFEKR_					0	0	0			REV__ENSG00000166507|ENST00000309979|NDST2	REV__ENSG00000166507|ENST00000309979|NDST2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.6011962890625	3	550.599329	1648.77616	0.29436	0.00016207	3.0304	0.0016686	3.3248	0.0018306	550.6010461865411	18.389	0.63671	18.312	18.121	18.758	-0.07671					40	17	4	0	0	0	0.8498	1	296	296		6.001	0.58812	1	246790	+		65812	21299	43740	43758	74745	74745					-0.022278191267560032
WMIRVPKGK	9	Unmodified	_WMIRVPKGK_					0	0	0			REV__nc|ENSG00000070756|P11940-2|PABPC1	REV__nc|ENSG00000070756|P11940-2|PABPC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	558.3322143554688	2	557.831329	1113.6481	1.0525	0.00058715	1.0784	0.00060155	2.1309	0.0011887	557.8317595803422	20.58	0.42451	20.515	20.343	20.768	-0.06543					28	19	2	0	0	0	0.7932	1	530	530		23.042	2.0956	1	60059	+		65813	16611	43741	43759	74746	74746					0.0958266535005805
WMPSEEQIN	9	Unmodified	_WMPSEEQIN_					0	0	0		ENSG00000188848|ENST00000502486|BEND4;nc|ENSG00000188848|Q6ZU67-4|BEND4	ENSG00000188848|ENST00000502486|BEND4	ENSG00000188848|ENST00000502486|BEND4	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	567.3294677734375	2	567.250231	1132.48591	0.4837	0.00027438	-1.9946	-0.0011315	-1.5109	-0.00085707	567.7489068515923	92.722	0.20474	92.947	92.832	93.037	0.22548					6	4	2	0	0	0	0.20789	1	9401	9401		40.778	12.896	1	24684			65814	7967	43742	43760	74747	74747					-0.07503387913379811
WMQINDKY	8	Unmodified	_WMQINDKY_					0	0	0			REV__ENSG00000143971|ENST00000272342|ETAA1	REV__ENSG00000143971|ENST00000272342|ETAA1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.2550048828125	2	549.257859	1096.50117	-0.19675	-0.00010807	-2.3173	-0.0012728	-2.5141	-0.0013809	549.2561095018983	76.349	0.53191	76.917	76.599	77.131	0.56835					43	14	4	0	0	0	0.89962	1	8686	8686		38.806	0	1	428480	+		65815	19861	43743	43761	74748	74748					-0.043224763255466314
WMVRFLTH	8	Unmodified	_WMVRFLTH_					0	0	0			REV__nc|ENSG00000164663|Q70CQ1-2|USP49	REV__nc|ENSG00000164663|Q70CQ1-2|USP49	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	545.8286743164062	2	545.286754	1088.55896	-0.33394	-0.00018209	1.165	0.00063527	0.83107	0.00045317	545.2869332691557	60.167	0.35767	60.153	60.036	60.394	-0.013729					14	8	2	0	0	0	0.4196	1	5585	5585		30.504	6.3009	1	213210	+		65816	21102	43744	43762	74749	74749					0.018218303905314315
WMVRFLTH	8	Unmodified	_WMVRFLTH_					0	0	0			REV__nc|ENSG00000164663|Q70CQ1-2|USP49	REV__nc|ENSG00000164663|Q70CQ1-2|USP49	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	545.8284301757812	2	545.286754	1088.55896	0.95473	0.0005206	0.79023	0.0004309	1.745	0.00095151	545.2867799010403	60.139	0.59688	60.107	59.723	60.32	-0.031727					23	15	2	0	0	0	0.4196	1	5656	5656		51.335	0	1	131910	+		65817	21102	43744	43762	74750	74750					0.018218303905314315
WMWWRRNRRGK	11	Unmodified	_WMWWRRNRRGK_					0	0	0		ENSG00000158220|ENST00000389567|ESYT3;ENST00000486831.5_1_3:138153640-138188991:+|nuORF;nc|ENSG00000158220|A0FGR9-2|ESYT3	ENSG00000158220|ENST00000389567|ESYT3	ENSG00000158220|ENST00000389567|ESYT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.622802734375	3	544.624872	1630.85279	-1.3933	-0.00075884	-2.6171	-0.0014253	-4.0104	-0.0021842	544.6234364500401	61.892	1.2669	62.281	61.745	63.012	0.38846					77	28	4	0	0	0	0.8398	1	6615	6615		6.6596	3.0405	1	1192900			65818	5467	43745	43763	74751	74751					0.0625941721309573
WMWWRRNRRGK	11	Unmodified	_WMWWRRNRRGK_					0	0	0		ENSG00000158220|ENST00000389567|ESYT3;ENST00000486831.5_1_3:138153640-138188991:+|nuORF;nc|ENSG00000158220|A0FGR9-2|ESYT3	ENSG00000158220|ENST00000389567|ESYT3	ENSG00000158220|ENST00000389567|ESYT3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.9572143554688	3	544.624872	1630.85279	-0.39173	-0.00021335	-3.5569	-0.0019372	-3.9487	-0.0021505	544.6229246673353	61.802	1.1493	62.356	61.843	62.992	0.55386					77	26	4	0	0	0	0.79224	1	6606	6606		12.957	3.3113	1	1002100			65819	5467	43745	43763	74752	74752					0.0625941721309573
WNCYKYIN	8	Unmodified	_WNCYKYIN_					0	0	0		ENSG00000068697|ENST00000175091|LAPTM4A	ENSG00000068697|ENST00000175091|LAPTM4A	ENSG00000068697|ENST00000175091|LAPTM4A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.2538452148438	2	552.252577	1102.4906	1.2806	0.00070722	1.5271	0.00084336	2.8077	0.0015506	552.2532948797596	111.44	1.2081	111.47	110.85	112.06	0.030388					69	46	2	0	0	0	0.79929	1	12247	12247		18.324	0.95945	1	33256			65820	1204	43746	43764	74753	74753					-0.05654458979984156
WNDYRYQAFVY	11	Unmodified	_WNDYRYQAFVY_					0	0	0		ENST00000554784.2_1_12:56775935-56776031:-|nuORF	ENST00000554784.2_1_12:56775935-56776031:-|nuORF	ENST00000554784.2_1_12:56775935-56776031:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	508.9017639160156	3	508.901731	1523.68336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.43	1	119.36	118.86	119.86	-0.07531								0	0	0	0.56276	1	12802	12802		6.3209	0.6221	1				65821	13726	43747	43765	74754	74754					-0.0575304537910597
WNFGGTPGHTL	11	Unmodified	_WNFGGTPGHTL_					0	0	0			REV__ENSG00000154127|ENST00000284273|UBASH3B	REV__ENSG00000154127|ENST00000284273|UBASH3B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	593.78759765625	2	593.78563	1185.55671	-0.29661	-0.00017612	-1.3825	-0.00082094	-1.6792	-0.00099706	593.7845042831175	68.621	0.62668	69.168	68.908	69.534	0.54693					29	14	3	0	0	0	0.43778	1	7595	7595		56.434	1.6575	1	223100	+		65822	20368	43748	43766	74755	74755					-0.02864926813549573
WNFGGTPGHTL	11	Unmodified	_WNFGGTPGHTL_					0	0	0			REV__ENSG00000154127|ENST00000284273|UBASH3B	REV__ENSG00000154127|ENST00000284273|UBASH3B	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	593.78563	1185.55671	0.26073	0.00015482	-1.8834	-0.0011183	-1.6226	-0.0009635	593.7839524191514	68.789	0.70004	69.173	68.821	69.521	0.38416	0.002847	-0.00032054	NaN	56.434	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	236820	+		65823	20368	43748	43766							-0.02864926813549573
WNLKGPLFED	10	Unmodified	_WNLKGPLFED_					0	0	0		nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA;ENSG00000113360|ENST00000344624|DROSHA;ENST00000512124.6_1_5:31467712-31485015:-|nuORF	nc|ENSG00000113360|Q9NRR4-3|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	406.8791809082031	3	406.876634	1217.60807	2.9206	0.0011883	3.4127	0.0013886	6.3333	0.0025769	406.8779749942913	18.544	0.89413	18.465	18.249	19.143	-0.078943					73	35	5	0	0	0	0.81117	1	338	338		38.754	6.0031	1	399050			65824	2716	43749	43767	74756	74756					0.007973971604769758
WNPRGKIGLRL	11	Unmodified	_WNPRGKIGLRL_					0	0	0		ENSG00000108797|ENST00000264638|CNTNAP1	ENSG00000108797|ENST00000264638|CNTNAP1	ENSG00000108797|ENST00000264638|CNTNAP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2666015625	3	437.266568	1308.77787	-0.68964	-0.00030156	3.497	0.0015291	2.8073	0.0012275	437.26800558442216	53.711	2.0145	53.686	52.906	54.921	-0.024754					170	55	5	0	0	0	0.74022	1	4923	4923		24.232	0	1	2651700			65825	2431	43750	43768	74757	74757					0.13583557953529635
WNPRMQLLC	9	Unmodified	_WNPRMQLLC_					0	0	0		ENST00000571402.1_1_17:48610272-48613815:+|nuORF;ENST00000268933.7_1_17:48610272-48613815:+|nuORF	ENST00000571402.1_1_17:48610272-48613815:+|nuORF	ENST00000571402.1_1_17:48610272-48613815:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.78955078125	2	580.788804	1159.56305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.3	1	19.226	18.726	19.726	-0.074974								0	0	0	0.31828	1	408	408		24.203	0	1				65826	9544	43751	43769	74758	74758					-0.010344481780521164
WNRRKRSSRVP	11	Unmodified	_WNRRKRSSRVP_					0	0	0		ENST00000227638.7_1_11:93862140-93862323:+|nuORF	ENST00000227638.7_1_11:93862140-93862323:+|nuORF	ENST00000227638.7_1_11:93862140-93862323:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.282470703125	3	481.279759	1440.81745	2.7369	0.0013172	4.1972	0.00202	6.9341	0.0033373	481.2817189970154	101.62	1.8989	101.57	100.36	102.26	-0.049828					113	44	3	0	0	0	0.7896	1	11058	11058		13.508	0.55046	1	536510			65827	9201	43752	43770	74759	74759					0.11467077956967842
WNRSQRLW	8	Unmodified	_WNRSQRLW_					0	0	0			REV__ENSG00000135426|ENST00000449076|TESPA1	REV__ENSG00000135426|ENST00000449076|TESPA1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.2999267578125	2	573.301781	1144.58901	-0.43257	-0.000248	-0.1123	-6.438E-05	-0.54487	-0.00031238	573.3015257531335	72.569	0.63763	72.529	72.246	72.883	-0.04039					52	22	3	0	0	0	0.9295	1	7092	7092		55.504	11.127	1	243080	+		65828	19221	43753	43771	74760	74760					0.022499053800856927
WNSAAQTPD	9	Unmodified	_WNSAAQTPD_					0	0	0		ENST00000494346.1_1_2:198436734-198482697:-|nuORF;ENSG00000162944|ENST00000295049|RFTN2	ENST00000494346.1_1_2:198436734-198482697:-|nuORF	ENST00000494346.1_1_2:198436734-198482697:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	495.2205810546875	2	495.219788	988.425024	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.98	1	64.1	63.6	64.6	0.12004								0	0	0	0.28386	1	5617	5617		37.159	0	1				65829	5752	43754	43772	74761	74761					-0.06965156901344471
WNSVLKEKY	9	Unmodified	_WNSVLKEKY_					0	0	0		ENST00000264669.9_1_5:7859467-7859563:-|nuORF	ENST00000264669.9_1_5:7859467-7859563:-|nuORF	ENST00000264669.9_1_5:7859467-7859563:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.8148803710938	2	583.813856	1165.61316	-0.38468	-0.00022458	3.2628	0.0019049	2.8781	0.0016803	583.8156604816535	74.933	0.69255	75.498	75.208	75.901	0.56458					35	16	3	0	0	0	0.51307	1	8498	8498		51.335	0.14276	1	676070			65830	9486	43755	43773	74762	74762					0.036977010230884844
WNWLSAPI	8	Unmodified	_WNWLSAPI_					0	0	0		ENST00000543035.5_2_12:3068990-3120181:+|nuORF	ENST00000543035.5_2_12:3068990-3120181:+|nuORF	ENST00000543035.5_2_12:3068990-3120181:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	493.7594299316406	2	493.758352	985.502152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.034	1	60.425	59.925	60.925	0.39077								0	0	0	0.30316	1	6351	6351		42.474	0	1				65831	13546	43756	43774	74763	74763					0.008821061056551116
WPAAAQRKRLL	11	Unmodified	_WPAAAQRKRLL_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2682800292969	3	437.266568	1308.77787	-0.7643	-0.0003342	3.6976	0.0016168	2.9333	0.0012826	437.2680989446087	50.458	1.6052	50.435	49.633	51.238	-0.02343					188	43	5	0	0	0	0.76579	1	4411	4411		18.531	0.69791	1	2919200			65832	5249	43757	43775	74764	74764					0.13583557953529635
WPAAAQRKRLL	11	Unmodified	_WPAAAQRKRLL_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.26708984375	3	437.266568	1308.77787	-0.73822	-0.0003228	3.7045	0.0016198	2.9662	0.001297	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.74022	2	4692	4508;4692		24.232	4.2013	1	3639500			65833	5249	43757	43775	74765;74766	74766					0.13583557953529635
WPAAAQRKRLL	11	Unmodified	_WPAAAQRKRLL_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2676086425781	3	437.266568	1308.77787	1.1681	0.00051075	1.7871	0.00078144	2.9551	0.0012922	437.26724329449274	51.792	1.9492	51.805	51.223	53.172	0.012436					194	47	5	0	0	0	0.73621	2	4640	4603;4640		25.126	5.0955	1	4130900			65834	5249	43757	43775	74767;74768	74768					0.13583557953529635
WPAAAQRKRLL	11	Unmodified	_WPAAAQRKRLL_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.60308837890625	3	437.266568	1308.77787	1.089	0.00047619	1.6885	0.00073832	2.7775	0.0012145	437.26718992738853	53.794	1.83	53.816	53.085	54.915	0.022541					199	55	5	0	0	0	0.74022	1	4893	4893		24.232	1.4504	1	2745300			65835	5249	43757	43775	74769	74769					0.13583557953529635
WPAAAQRKRLL	11	Unmodified	_WPAAAQRKRLL_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2662353515625	3	437.266568	1308.77787	0.29718	0.00012995	2.7258	0.0011919	3.023	0.0013219	437.26766300953176	51.827	1.7748	51.887	51.373	53.148	0.059719					208	54	5	0	0	0	0.73621	2	4272	4256;4272		25.126	8.5961	1	4533800			65836	5249	43757	43775	74770;74771	74771					0.13583557953529635
WPAAAQRKRLL	11	Unmodified	_WPAAAQRKRLL_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26776123046875	3	437.266568	1308.77787	-0.49223	-0.00021524	3.5152	0.0015371	3.023	0.0013218	437.26801895494816	50.674	1.6223	50.582	49.802	51.424	-0.091793					179	44	5	0	0	0	0.76251	1	4064	4064		19.263	0.73163	1	3262400			65837	5249	43757	43775	74772	74772					0.13583557953529635
WPAAAQRKRLL	11	Unmodified	_WPAAAQRKRLL_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2669982910156	3	437.266568	1308.77787	-0.53562	-0.00023421	3.585	0.0015676	3.0494	0.0013334	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.76579	1	4256	4256		18.531	1.3643	1	4132000			65838	5249	43757	43775	74773	74773					0.13583557953529635
WPAAAQRKRLL	11	Unmodified	_WPAAAQRKRLL_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.267578125	3	437.266568	1308.77787	-0.59734	-0.0002612	3.3641	0.001471	2.7668	0.0012098	437.26794776061496	53.586	1.923	53.524	52.78	54.703	-0.062065					164	54	5	0	0	0	0.70584	1	4468	4468		30.569	9.7317	1	2564600			65839	5249	43757	43775	74774	74774					0.13583557953529635
WPAAAQRKRLL	11	Unmodified	_WPAAAQRKRLL_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2676696777344	3	437.266568	1308.77787	1.1666	0.00051013	1.5125	0.00066137	2.6791	0.0011715	437.26715109542596	51.001	1.6388	51.753	50.881	52.52	0.75174					116	39	4	0	0	0	0.74405	1	5047	5047		23.378	8.0404	1	3280800			65840	5249	43757	43775	74775	74775					0.13583557953529635
WPAAAQRKRLL	11	Unmodified	_WPAAAQRKRLL_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	437.266568	1308.77787	-0.042633	-1.8642E-05	4.7224	0.002065	4.6798	0.0020463	437.2688718636912	53.598	0.95396	54.012	53.499	54.453	0.4139	0.2189	0.0018305	NaN	30.569	36	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149430			65841	5249	43757	43775							0.13583557953529635
WPAAAQRKRLL	11	Unmodified	_WPAAAQRKRLL_					0	0	0		ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	ENSG00000153976|ENST00000284110|HS3ST3A1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	437.266568	1308.77787	0.035853	1.5678E-05	4.7659	0.002084	4.8018	0.0020997	437.2689069496859	53.25	0.9542	53.864	53.366	54.321	0.61436	0.070775	0.0018875	NaN	30.569	39	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	184850			65842	5249	43757	43775							0.13583557953529635
WPALALLRS	9	Unmodified	_WPALALLRS_					0	0	0			REV__ENST00000370220.1_1_10:102760099-102760363:+|nuORF	REV__ENST00000370220.1_1_10:102760099-102760363:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8087768554688	2	513.808377	1025.6022	-0.21927	-0.00011266	1.2957	0.00066573	1.0764	0.00055307	513.8089392696643	49.859	2.2257	49.766	49.153	51.379	-0.093178					136	59	4	0	0	0	0.78536	1	3911	3911		29.15	4.9468	1	1550000	+		65843	25646	43758	43776	74776	74776					0.0904234343945518
WPALLASRL	9	Unmodified	_WPALLASRL_					0	0	0			REV__ENST00000471490.1_1_21:45542017-45544896:+|nuORF	REV__ENST00000471490.1_1_21:45542017-45544896:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8087768554688	2	513.808377	1025.6022	-0.18035	-9.2668E-05	1.1688	0.00060056	0.98848	0.00050789	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.77696	1	4192	4192		31.53	7.3271	1	1777300	+		65844	27233	43759	43777	74777	74777					0.0904234343945518
WPALLASRL	9	Unmodified	_WPALLASRL_					0	0	0			REV__ENST00000471490.1_1_21:45542017-45544896:+|nuORF	REV__ENST00000471490.1_1_21:45542017-45544896:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	513.80908203125	2	513.808377	1025.6022	-0.65666	-0.0003374	1.6077	0.00082607	0.95108	0.00048867	513.8090545546751	47.78	2.1477	48.249	47.733	49.881	0.46941					113	53	4	0	0	0	0.67345	1	4572	4572		42.396	13.247	1	3097000	+		65845	27233	43759	43777	74778	74778					0.0904234343945518
WPALLASRL	9	Unmodified	_WPALLASRL_					0	0	0			REV__ENST00000471490.1_1_21:45542017-45544896:+|nuORF	REV__ENST00000471490.1_1_21:45542017-45544896:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	513.8092041015625	2	513.808377	1025.6022	-0.49115	-0.00025236	1.4357	0.00073767	0.94454	0.00048531	513.8089618478288	47.549	2.118	48.472	47.871	49.989	0.92315					109	52	4	0	0	0	0.74721	1	4517	4517		37.159	1.5408	1	2805200	+		65846	27233	43759	43777	74779	74779					0.0904234343945518
WPALLSPQIIK	11	Unmodified	_WPALLSPQIIK_					0	0	0			REV__ENST00000331242.11_1_7:86817536-86820299:+|nuORF	REV__ENST00000331242.11_1_7:86817536-86820299:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3824462890625	2	633.384448	1264.75434	0.48639	0.00030807	0.93172	0.00059014	1.4181	0.00089821	633.3849528535055	51.23	1.8238	51.28	50.541	52.365	0.049896					89	57	2	0	0	0	0.75779	1	4091	4091		22.58	5.8623	1	205950	+		65847	25121	43760	43778	74780	74780					0.13255699396358978
WPALLSPQIIK	11	Unmodified	_WPALLSPQIIK_					0	0	0			REV__ENST00000331242.11_1_7:86817536-86820299:+|nuORF	REV__ENST00000331242.11_1_7:86817536-86820299:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	422.5906982421875	3	422.592058	1264.75434	-0.81678	-0.00034517	2.1529	0.00090979	1.3361	0.00056462	422.59284282323074	58.274	1.5988	58.267	57.538	59.137	-0.0074387					138	72	3	0	0	0	0.67762	1	5018	5018		35.178	12.617	1	237230	+		65848	25121	43760	43778	74781	74781					0.13255699396358978
WPALQISSL	9	Unmodified	_WPALQISSL_					0	0	0		chr6:10770204-10857445|58|19.48|0.01|11.41|+|2|TE_info:MLT2C1,MLT2C1_dup920,ERVL,LTR,acceptor,+,10857445,10857644|TMEM14B,None|3;chr6:10749698-10857445|37|16.19|0.0|20.63|+|2|TE_info:MLT2C1,MLT2C1_dup920,ERVL,LTR,acceptor,+,10857445,10857644|TMEM14B,None|2	chr6:10770204-10857445|58|19.48|0.01|11.41|+|2|TE_info:MLT2C1,MLT2C1_dup920,ERVL,LTR,acceptor,+,10857445,10857644|TMEM14B,None|3	chr6:10770204-10857445|58|19.48|0.01|11.41|+|2|TE_info:MLT2C1,MLT2C1_dup920,ERVL,LTR,acceptor,+,10857445,10857644|TMEM14B,None|3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	507.7841796875	2	507.784567	1013.55458	-1.7124	-0.00086954	-2.429	-0.0012334	-4.1414	-0.002103	507.78325307714454	32.01	0.63246	32.01	31.823	32.456	0					41	23	3	0	0	0	0.78536	1	1577	1577		29.15	0	1	92283			65849	463	43761	43779	74782	74782					0.04834644448601466
WPALRGAIV	9	Unmodified	_WPALRGAIV_					0	0	0			REV__ENSG00000177191|ENST00000691102|B3GNT8	REV__ENSG00000177191|ENST00000691102|B3GNT8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79638671875	2	491.795269	981.575986	0.019467	9.5736E-06	1.1365	0.00055891	1.1559	0.00056849	491.79576201092283	51.101	2.0315	51.099	50.261	52.292	-0.0020447					122	53	3	0	0	0	0.7932	1	4406	4406		24.203	5.8783	1	310050	+		65850	22188	43762	43780	74783	74783					0.08446074267988024
WPALRGAIV	9	Unmodified	_WPALRGAIV_					0	0	0			REV__ENSG00000177191|ENST00000691102|B3GNT8	REV__ENSG00000177191|ENST00000691102|B3GNT8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.79559326171875	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.7932	1	4309	4309		25.45	1.2474	1	1111900	+		65851	22188	43762	43780	74784	74784					0.08446074267988024
WPALRGAIV	9	Unmodified	_WPALRGAIV_					0	0	0			REV__ENSG00000177191|ENST00000691102|B3GNT8	REV__ENSG00000177191|ENST00000691102|B3GNT8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7948303222656	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.77546	1	4283	4283		31.955	5.1588	1	1232600	+		65852	22188	43762	43780	74785	74785					0.08446074267988024
WPALRPALA	9	Unmodified	_WPALRPALA_					0	0	0			REV__ENST00000433385.1_1_2:122416383-122416548:-|nuORF	REV__ENST00000433385.1_1_2:122416383-122416548:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.7952880859375	2	497.795269	993.575986	-0.66885	-0.00033295	1.9666	0.00097898	1.2978	0.00064603	497.7958642477004	48.816	1.5297	48.791	47.88	49.41	-0.025112					123	35	4	0	0	0	0.7932	1	4101	4101		26.796	2.5934	1	502690	+		65853	26649	43763	43781	74786	74786					0.07894074267960605
WPASGQHTAWG	11	Unmodified	_WPASGQHTAWG_					0	0	0			REV__ENST00000318080.6_1_9:131857548-131857632:-|nuORF	REV__ENST00000318080.6_1_9:131857548-131857632:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.2744140625	2	599.275429	1196.53631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.021	1	17.944	17.444	18.444	-0.07671								0	0	0	0.56276	1	260	260		25.574	0.44807	1		+		65854	24969	43764	43782	74787	74787					-0.054100974733728435
WPATLVLAR	9	Unmodified	_WPATLVLAR_					0	0	0			REV__ENST00000533120.1_1_8:144648680-144649274:-|nuORF	REV__ENST00000533120.1_1_8:144648680-144649274:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.8079833984375	2	513.808377	1025.6022	0.090877	4.6693E-05	1.0576	0.00054341	1.1485	0.00059011	513.8088000948618	49.686	2.2575	49.683	49.136	51.394	-0.0030327					166	59	4	0	0	0	0.78983	1	4300	4300		27.882	3.6795	1	1448700	+		65855	26217	43765	43783	74788	74788					0.0904234343945518
WPATLVLAR	9	Unmodified	_WPATLVLAR_					0	0	0			REV__ENST00000533120.1_1_8:144648680-144649274:-|nuORF	REV__ENST00000533120.1_1_8:144648680-144649274:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8089599609375	2	513.808377	1025.6022	-0.18035	-9.2668E-05	1.1688	0.00060056	0.98848	0.00050789	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.78058	1	4203	4203		30.504	3.7075	1	1777300	+		65856	26217	43765	43783	74789	74789					0.0904234343945518
WPATLVLAR	9	Unmodified	_WPATLVLAR_					0	0	0			REV__ENST00000533120.1_1_8:144648680-144649274:-|nuORF	REV__ENST00000533120.1_1_8:144648680-144649274:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.808837890625	2	513.808377	1025.6022	0.35777	0.00018383	0.79125	0.00040655	1.149	0.00059038	513.8086331926099	49.874	1.2106	49.916	49.348	50.559	0.04224					99	31	4	0	0	0	0.7932	1	3884	3884		21.96	0	1	1443600	+		65857	26217	43765	43783	74790	74790					0.0904234343945518
WPATLVLAR	9	Unmodified	_WPATLVLAR_					0	0	0			REV__ENST00000533120.1_1_8:144648680-144649274:-|nuORF	REV__ENST00000533120.1_1_8:144648680-144649274:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	513.8080444335938	2	513.808377	1025.6022	0.37872	0.00019459	0.75131	0.00038603	1.13	0.00058062	513.8086271826777	52.267	1.8891	52.326	51.542	53.431	0.059719					140	59	3	0	0	0	0.7932	1	4121	4121		20.947	0.95016	1	971720	+		65858	26217	43765	43783	74791	74791					0.0904234343945518
WPAWGMPTS	9	Unmodified	_WPAWGMPTS_					0	0	0			REV__ENST00000430644.5_1_4:728613-728682:+|nuORF	REV__ENST00000430644.5_1_4:728613-728682:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.7337646484375	2	516.73402	1031.45349	-0.72826	-0.00037632	1.1965	0.0006183	0.46829	0.00024198	516.7345563584511	43.524	0.55219	43.488	43.276	43.828	-0.035816					26	12	3	0	0	0	0.69914	1	3410	3410		40.573	1.7665	1	194890	+		65859	26609	43766	43784	74792	74792					-0.060981305257428176
WPCAHLPW	8	Unmodified	_WPCAHLPW_					0	0	0		ENSG00000140323|ENST00000267889|DISP2	ENSG00000140323|ENST00000267889|DISP2	ENSG00000140323|ENST00000267889|DISP2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.605712890625	2	505.239273	1008.46399	-0.82907	-0.00041888	2.5224	0.0012744	1.6933	0.00085554	505.240466593086	46.734	0.56968	46.73	46.449	47.019	-0.0041618					21	13	2	0	0	0	0.4196	1	3817	3817		24.504	1.4615	1	118520			65860	4425	43767	43785	74793	74793					-0.039901030806731796
WPCLRGGRLL	10	Unmodified	_WPCLRGGRLL_					0	0	0		ENST00000466438.1_1_22:35653544-35654384:+|nuORF	ENST00000466438.1_1_22:35653544-35654384:+|nuORF	ENST00000466438.1_1_22:35653544-35654384:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	585.8292236328125	2	585.83186	1169.64917	-0.92321	-0.00054084	-1.6417	-0.00096177	-2.5649	-0.0015026	585.8307293050794	57.888	1.4017	57.888	57.479	58.881	0					105	56	3	0	0	0	0.86452	1	4980	4980		30.504	2.4222	1	164040			65861	12136	43768	43786	74794	74794					0.07112879718988552
WPDLLRPEG	9	Unmodified	_WPDLLRPEG_					0	0	0			REV__ENST00000292140.9_1_19:44006416-44008779:-|nuORF	REV__ENST00000292140.9_1_19:44006416-44008779:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7857666015625	2	541.785099	1081.55564	0.62478	0.0003385	-0.32404	-0.00017556	0.30074	0.00016294	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.51307	1	5301	5301		51.335	4.8787	1	5802700	+		65862	24673	43769	43787	74795	74795					0.018128588175159166
WPFIKPKP	8	Unmodified	_WPFIKPKP_					0	0	0		ENST00000442440.1_1_20:23337427-23338640:-|nuORF	ENST00000442440.1_1_20:23337427-23338640:-|nuORF	ENST00000442440.1_1_20:23337427-23338640:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	506.800048828125	2	506.802563	1011.59057	0.30541	0.00015478	-3.2523	-0.0016483	-2.9469	-0.0014935	506.80082983896983	44.395	2.2264	44.444	43.876	46.103	0.048996					124	55	3	0	0	0	0.884	1	3163	3163		33.516	3.1979	1	412810			65863	11792	43770	43788	74796	74796					0.08524146416129952
WPFIKPKP	8	Unmodified	_WPFIKPKP_					0	0	0		ENST00000442440.1_1_20:23337427-23338640:-|nuORF	ENST00000442440.1_1_20:23337427-23338640:-|nuORF	ENST00000442440.1_1_20:23337427-23338640:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.80029296875	2	506.802563	1011.59057	-0.048814	-2.4739E-05	-3.01	-0.0015255	-3.0589	-0.0015502	506.8010281733497	44.419	2.9466	44.361	42.564	45.51	-0.058262					129	72	3	0	0	0	0.86791	1	3123	3123		28.254	1.5614	1	475290			65864	11792	43770	43788	74797	74797					0.08524146416129952
WPFIKPKP	8	Unmodified	_WPFIKPKP_					0	0	0		ENST00000442440.1_1_20:23337427-23338640:-|nuORF	ENST00000442440.1_1_20:23337427-23338640:-|nuORF	ENST00000442440.1_1_20:23337427-23338640:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.7998352050781	2	506.802563	1011.59057	-0.34654	-0.00017563	-2.476	-0.0012548	-2.8225	-0.0014305	506.8012475613855	52.837	1.9821	52.763	52.142	54.124	-0.074509					82	54	2	0	0	0	0.86791	1	4284	4284		28.254	0	1	214150			65865	11792	43770	43788	74798	74798					0.08524146416129952
WPGLLGQKL	9	Unmodified	_WPGLLGQKL_					0	0	0			REV__ENST00000541788.1_22:38616387-38617064:-|nuORF	REV__ENST00000541788.1_22:38616387-38617064:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.299560546875	2	506.302927	1010.5913	-0.7758	-0.00039279	-3.116	-0.0015776	-3.8918	-0.0019704	506.3012917024536	96.808	1.2917	96.808	96.218	97.509	0					69	29	3	0	0	0	0.7932	1	9710	9710		20.482	1.1219	1	235960	+		65866	28490	43771	43789	74799	74799					0.0864294106518173
WPGTLGGR	8	Unmodified	_WPGTLGGR_					0	0	0			REV__ENSG00000282936|ENST00000634965|unknown	REV__ENSG00000282936|ENST00000634965|unknown	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	422.227783203125	2	422.22722	842.439886	-1.6467	-0.00069529	3.5886	0.0015152	1.9419	0.00081991	422.2286089277903	56.345	1.4516	56.345	54.998	56.45	0					98	47	3	0	0	0	0.7961	1	4820	4820		17.365	0	1	495340	+		65867	24052	43772	43790	74800	74800					0.01236379757335726
WPIIIGCV	8	Unmodified	_WPIIIGCV_					0	0	0			REV__nc|ENSG00000144908|O75891-3|ALDH1L1	REV__nc|ENSG00000144908|O75891-3|ALDH1L1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	450.75396728515625	2	450.754224	899.493896	-1.264	-0.00056978	1.1883	0.00053562	-0.075782	-3.4159E-05	450.75468407870227	81.425	5.8702	81.57	78.202	84.072	0.14513					279	159	3	0	0	0	0.88393	1	7505	7505		33.493	6.6969	1	414240	+		65868	29909	43773	43791	74801	74801					0.04012835864682529
WPILVSIIIR	10	Unmodified	_WPILVSIIIR_					0	0	0			REV__ENST00000260403.6_1_15:43452900-43461809:+|nuORF	REV__ENST00000260403.6_1_15:43452900-43461809:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	403.9298095703125	3	403.928781	1208.76451	0.41682	0.00016837	1.3719	0.00055414	1.7887	0.0007225	403.92919444194524	46.164	0.84489	46.636	46.254	47.099	0.47139					60	20	4	0	0	0	0.89708	1	4282	4282		9.6461	0	1	1771500	+		65869	24368	43774	43792	74802	74802					0.16848307121586004
WPIRRVHL	8	Unmodified	_WPIRRVHL_					0	0	0			REV__ENST00000494978.5_1_7:143510715-143533742:-|nuORF	REV__ENST00000494978.5_1_7:143510715-143533742:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.8248901367188	2	538.827435	1075.64032	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.2	1	116.22	115.72	116.72	0.026466								0	0	0	0.29353	1	12763	12763		28.254	0.37203	1		+		65870	27726	43775	43793	74803	74803					0.10552274144788498
WPKKGACI	8	Unmodified	_WPKKGACI_					0	0	0			REV__ENSG00000233757|ENST00000425953|ZNF892	REV__ENSG00000233757|ENST00000425953|ZNF892	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.7502136230469	2	451.749473	901.484393	-0.037726	-1.7043E-05	2.5829	0.0011668	2.5452	0.0011498	451.7504086054795	33.873	0.52267	33.871	33.739	34.262	-0.0023079					18	11	2	0	0	0	0.86791	1	1998	1998		28.254	1.4582	1	44057	+		65871	23775	43776	43794	74804	74804					0.029710675791534413
WPKLRLPS	8	Unmodified	_WPKLRLPS_					0	0	0		ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.80389404296875	2	498.803094	995.591636	-1.4653	-0.00073091	2.6111	0.0013024	1.1457	0.00057149	498.8042663026882	52.118	2.7072	52.118	51.553	54.26	0					180	74	4	0	0	0	0.84341	1	4395	4395		24.203	1.1603	1	2964600			65872	8315	43777	43795	74805	74805					0.09366360785031702
WPKPKGIKKSL	11	Unmodified	_WPKPKGIKKSL_					0	0	0		ENST00000379310.7_2_13:42141480-42141777:-|nuORF	ENST00000379310.7_2_13:42141480-42141777:-|nuORF	ENST00000379310.7_2_13:42141480-42141777:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	641.4006958007812	2	641.405715	1280.79688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.72	1	111.66	111.16	112.16	-0.059937								0	0	0	0.56276	1	12158	12158		17.468	2.6031	1				65873	10887	43778	43796	74806	74806					0.16771094524619912
WPLAAAGW	8	Unmodified	_WPLAAAGW_					0	0	0			REV__ENSG00000189045|ENST00000601380|ANKDD1B	REV__ENSG00000189045|ENST00000601380|ANKDD1B	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	436.77374267578125	2	436.226688	870.438824	1.7852	0.00077875	0.70293	0.00030664	2.4881	0.0010854	436.22887225582286	27.311	0.25133	27.056	26.945	27.196	-0.25465					7	5	2	0	0	0	0.4196	1	1594	1594		33.493	15.169	1	27054	+		65874	23058	43779	43797	74807	74807					-0.0015783461158207501
WPLAAVLL	8	Unmodified	_WPLAAVLL_					0	0	0			REV__nc|ENSG00000115828|Q16769-2|QPCT	REV__nc|ENSG00000115828|Q16769-2|QPCT	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	441.7881164550781	2	441.776014	881.537475	-0.79962	-0.00035325	0.91095	0.00040244	0.11133	4.9181E-05	441.77652153050025	38.403	0.1188	38.745	38.658	38.777	0.34187					4	2	2	0	0	0	0.4196	1	3151	3151		10.185	0	1	42289	+		65875	18154	43780	43798	74808	74808					0.09196768633466945
WPLAGALIRLQ	11	Unmodified	_WPLAGALIRLQ_					0	0	0		ENST00000268383.6_1_16:22357946-22358198:-|nuORF	ENST00000268383.6_1_16:22357946-22358198:-|nuORF	ENST00000268383.6_1_16:22357946-22358198:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	619.3716430664062	2	619.374415	1236.73428	-0.31167	-0.00019304	-2.5734	-0.0015939	-2.885	-0.0017869	619.3734435178485	101.78	1.7281	101.8	101.4	103.13	0.01989					94	41	4	0	0	0	0.75495	1	10904	10904		20.947	0	1	3076000			65876	9538	43781	43799	74809	74809					0.1253794845642915
WPLAPTEPL	9	Unmodified	_WPLAPTEPL_					0	0	0			REV__ENST00000470671.1_1_X:71475533-71493153:-|nuORF	REV__ENST00000470671.1_1_X:71475533-71493153:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	512.2827758789062	2	512.279118	1022.54368	0.38138	0.00019537	3.97	0.0020338	4.3514	0.0022291	512.2810762358159	86.258	3.4931	86.314	85.063	88.556	0.055649					143	81	2	0	0	0	0.76996	1	8786	8786		33.516	0.70317	1	344420	+		65877	27215	43782	43800	74810	74810					0.033312420743072835
WPLCLPVL	8	Unmodified	_WPLCLPVL_					0	0	0			REV__ENST00000577016.5_3_17:3422132-3432236:-|nuORF	REV__ENST00000577016.5_3_17:3422132-3432236:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	470.7694091796875	2	470.769874	939.525196	-0.23699	-0.00011157	-1.5339	-0.0007221	-1.7709	-0.00083367	470.7690852138792	80.179	2.0778	80.595	78.892	80.97	0.41621					101	48	4	0	0	0	0.91333	1	9089	9089		43.626	0	1	1333300	+		65878	28999	43783	43801	74811	74811					0.05301408898776572
WPLDVCHFHRV	11	Unmodified	_WPLDVCHFHRV_					0	0	0			REV__ENST00000471487.5_1_6:46982380-46993719:-|nuORF	REV__ENST00000471487.5_1_6:46982380-46993719:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	470.2345275878906	3	470.23628	1407.68701	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.272	1	76.362	75.862	76.862	0.089363								0	0	0	0.56276	1	7099	7099		30.569	2.9249	1		+		65879	27231	43784	43802	74812	74812					-0.0005265408624381962
WPLGGRPLV	9	Unmodified	_WPLGGRPLV_					0	0	0		ENST00000491892.1_1_22:20082246-20094325:+|nuORF	ENST00000491892.1_1_22:20082246-20094325:+|nuORF	ENST00000491892.1_1_22:20082246-20094325:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	497.7957458496094	2	497.795269	993.575986	-1.5279	-0.00076056	2.6004	0.0012945	1.0726	0.00053392	497.79634722185193	48.476	0.80991	48.476	47.85	48.66	0					53	20	3	0	0	0	0.78851	1	3752	3752		28.254	6.5519	1	518630			65880	12694	43785	43803	74813	74813					0.07894074267983342
WPLGGRPLV	9	Unmodified	_WPLGGRPLV_					0	0	0		ENST00000491892.1_1_22:20082246-20094325:+|nuORF	ENST00000491892.1_1_22:20082246-20094325:+|nuORF	ENST00000491892.1_1_22:20082246-20094325:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.7948913574219	2	497.795269	993.575986	0.10323	5.1388E-05	0.97414	0.00048492	1.0774	0.00053631	497.7955420598114	48.958	1.1928	48.952	48.605	49.798	-0.0056381					56	26	3	0	0	0	0.67235	1	4036	4036		42.474	8.9589	1	455850			65881	12694	43785	43803	74814	74814					0.07894074267983342
WPLGGRPLV	9	Unmodified	_WPLGGRPLV_					0	0	0		ENST00000491892.1_1_22:20082246-20094325:+|nuORF	ENST00000491892.1_1_22:20082246-20094325:+|nuORF	ENST00000491892.1_1_22:20082246-20094325:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	497.7953796386719	2	497.795269	993.575986	-1.2593	-0.00062688	2.6686	0.0013284	1.4093	0.00070156	497.79616758279207	48.708	1.9058	48.709	47.99	49.896	0.00017166					121	43	4	0	0	0	0.76996	1	4050	4050		33.516	8.0654	1	500820			65882	12694	43785	43803	74815	74815					0.07894074267983342
WPLGGRPLV	9	Unmodified	_WPLGGRPLV_					0	0	0		ENST00000491892.1_1_22:20082246-20094325:+|nuORF	ENST00000491892.1_1_22:20082246-20094325:+|nuORF	ENST00000491892.1_1_22:20082246-20094325:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	497.79632568359375	2	497.795269	993.575986	-0.21329	-0.00010617	1.5343	0.00076377	1.321	0.0006576	497.7957318764316	48.396	0.83173	48.303	47.807	48.639	-0.093178					51	20	3	0	0	0	0.78851	1	3677	3677		28.254	0	1	388480			65883	12694	43785	43803	74816	74816					0.07894074267983342
WPLGIRLN	8	Unmodified	_WPLGIRLN_					0	0	0		ENST00000487903.5_1_13:113536381-113537092:+|nuORF	ENST00000487903.5_1_13:113536381-113537092:+|nuORF	ENST00000487903.5_1_13:113536381-113537092:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	485.2872009277344	2	484.787444	967.560336	-1.1421	-0.00055367	-2.1854	-0.0010594	-3.3275	-0.0016131	484.78789018167805	41.476	1.8948	41.435	40.856	42.751	-0.04081					148	48	4	0	0	0	0.89457	1	3147	3147		37.028	1.8278	1	1666200			65884	12611	43786	43804	74817	74817					0.07525787750921609
WPLGIRLN	8	Unmodified	_WPLGIRLN_					0	0	0		ENST00000487903.5_1_13:113536381-113537092:+|nuORF	ENST00000487903.5_1_13:113536381-113537092:+|nuORF	ENST00000487903.5_1_13:113536381-113537092:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	485.2862548828125	2	484.787444	967.560336	-1.9972	-0.00096823	2.4086	0.0011677	0.41137	0.00019943	484.7880846012334	40.756	1.0376	41.148	40.377	41.415	0.39209					49	28	3	0	0	0	0.4196	1	3537	3537		28.254	16.047	1	7044500			65885	12611	43786	43804	74818	74818					0.07525787750921609
WPLGLRTGI	9	Unmodified	_WPLGLRTGI_					0	0	0		ENST00000262041.5_1_7:15726125-15726251:-|nuORF	ENST00000262041.5_1_7:15726125-15726251:-|nuORF	ENST00000262041.5_1_7:15726125-15726251:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.80010986328125	2	506.800552	1011.58655	-1.5362	-0.00077856	2.1529	0.0010911	0.61671	0.00031255	506.8015777288388	44.442	2.8102	44.442	42.605	45.415	0					120	68	3	0	0	0	0.7932	1	3224	3224		24.203	1.1603	1	386210			65886	9428	43787	43805	74819	74819					0.08122056922411502
WPLGLRTGI	9	Unmodified	_WPLGLRTGI_					0	0	0		ENST00000262041.5_1_7:15726125-15726251:-|nuORF	ENST00000262041.5_1_7:15726125-15726251:-|nuORF	ENST00000262041.5_1_7:15726125-15726251:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.801025390625	2	506.800552	1011.58655	-0.65008	-0.00032946	1.6125	0.00081723	0.96246	0.00048778	506.8012923744614	46.783	1.6998	46.754	45.886	47.586	-0.028782					74	44	2	0	0	0	0.77546	1	3831	3831		31.955	2.8053	1	223510			65887	9428	43787	43805	74820	74820					0.08122056922411502
WPLGLRTGI	9	Unmodified	_WPLGLRTGI_					0	0	0		ENST00000262041.5_1_7:15726125-15726251:-|nuORF	ENST00000262041.5_1_7:15726125-15726251:-|nuORF	ENST00000262041.5_1_7:15726125-15726251:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.79925537109375	2	506.800552	1011.58655	-0.4843	-0.00024544	2.1408	0.001085	1.6565	0.00083952	506.8016364988691	53.923	1.2683	53.971	53.181	54.449	0.047802					71	44	2	0	0	0	0.77546	1	4396	4396		31.955	1.4512	1	157540			65888	9428	43787	43805	74821	74821					0.08122056922411502
WPLGRGSA	8	Unmodified	_WPLGRGSA_					0	0	0		nc|ENSG00000137857|Q9NRD9-2|DUOX1	nc|ENSG00000137857|Q9NRD9-2|DUOX1	nc|ENSG00000137857|Q9NRD9-2|DUOX1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	422.2294006347656	2	422.22722	842.439886	-0.18819	-7.946E-05	1.3666	0.00057702	1.1784	0.00049756	422.22774658617425	61.684	0.88657	61.675	61.564	62.45	-0.0094147					63	38	2	0	0	0	0.86288	1	5712	5712		26.796	0	1	445730			65889	14947	43788	43806	74822	74822					0.012363797573243573
WPLKQLDK	8	Unmodified	_WPLKQLDK_					0	0	0			REV__nc|ENSG00000135476|Q14674-2|ESPL1	REV__nc|ENSG00000135476|Q14674-2|ESPL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	514.298095703125	2	514.300384	1026.58622	-0.049414	-2.5414E-05	-4.0876	-0.0021023	-4.137	-0.0021277	514.2983333190766	96.625	2.0478	96.687	95.464	97.512	0.062225					95	47	3	0	0	0	0.80308	1	10152	10152		16.473	0.83134	1	523750	+		65890	19228	43789	43807	74823	74823					0.07398637202527425
WPLLRNPV	8	Unmodified	_WPLLRNPV_					0	0	0			REV__ENSG00000173517|ENST00000682557|PEAK1	REV__ENSG00000173517|ENST00000682557|PEAK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	497.7956848144531	2	497.795269	993.575986	0.12484	6.2144E-05	1.1746	0.00058469	1.2994	0.00064683	497.7955900071464	48.374	0.68279	48.369	47.966	48.649	-0.0056381					42	15	3	0	0	0	0.87276	2	3976	3976;4000		29.842	4.3914	1	381930	+		65891	21929	43790	43808	74824;74825	74824					0.07894074267983342
WPLLRNPV	8	Unmodified	_WPLLRNPV_					0	0	0			REV__ENSG00000173517|ENST00000682557|PEAK1	REV__ENSG00000173517|ENST00000682557|PEAK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.7955322265625	2	497.795269	993.575986	-0.66885	-0.00033295	1.9666	0.00097898	1.2978	0.00064603	497.7958642477004	48.816	1.5297	48.791	47.88	49.41	-0.025112					123	35	4	0	0	0	0.82464	1	4077	4077		21.702	1.2205	1	502690	+		65892	21929	43790	43808	74826	74826					0.07894074267983342
WPLLRNPV	8	Unmodified	_WPLLRNPV_					0	0	0			REV__ENSG00000173517|ENST00000682557|PEAK1	REV__ENSG00000173517|ENST00000682557|PEAK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.7964782714844	2	497.795269	993.575986	0.32848	0.00016352	0.8359	0.0004161	1.1644	0.00057962	497.7954109844358	48.391	0.87605	48.429	47.96	48.836	0.037731					54	21	3	0	0	0	0.86791	1	3654	3654		28.254	1.4582	1	407880	+		65893	21929	43790	43808	74827	74827					0.07894074267983342
WPLNRALL	8	Unmodified	_WPLNRALL_					0	0	0		ENSG00000172967|ENST00000684488|XKR3	ENSG00000172967|ENST00000684488|XKR3	ENSG00000172967|ENST00000684488|XKR3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7965393066406	2	491.795269	981.575986	0.13478	6.6286E-05	0.38667	0.00019016	0.52145	0.00025645	491.7956585101208	58.944	2.823	58.913	58.166	60.989	-0.030888					167	80	3	0	0	0	0.88915	1	5605	5605		35.201	7.3185	1	176030			65894	6810	43791	43809	74828	74828					0.08446074267999393
WPLNRALL	8	Unmodified	_WPLNRALL_					0	0	0		ENSG00000172967|ENST00000684488|XKR3	ENSG00000172967|ENST00000684488|XKR3	ENSG00000172967|ENST00000684488|XKR3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79608154296875	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.86288	1	3924	3924		26.796	0	1	1502200			65895	6810	43791	43809	74829	74829					0.08446074267999393
WPLNRGLI	8	Unmodified	_WPLNRGLI_					0	0	0			REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	REV__ENST00000470521.1_1_1:222791452-222819114:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.78656005859375	2	484.787444	967.560336	-1.9972	-0.00096823	2.4086	0.0011677	0.41137	0.00019943	484.7880846012334	40.756	1.0376	41.148	40.377	41.415	0.39209					49	28	3	0	0	0	0.92176	1	3551	3551		46.766	2.2354	1	7044500	+		65896	20380	43792	43810	74830	74830					0.07525787750955715
WPLQIRVA	8	Unmodified	_WPLQIRVA_					0	0	0		ENST00000565633.1_1_16:88729753-88737893:+|nuORF;ENST00000563261.5_1_16:88729708-88738384:+|nuORF	ENST00000565633.1_1_16:88729753-88737893:+|nuORF	ENST00000565633.1_1_16:88729753-88737893:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7954406738281	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.86288	1	4234	4234		26.796	0	1	1232600			65897	13864	43793	43811	74831	74831					0.08446074267988024
WPLQIRVA	8	Unmodified	_WPLQIRVA_					0	0	0		ENST00000565633.1_1_16:88729753-88737893:+|nuORF;ENST00000563261.5_1_16:88729708-88738384:+|nuORF	ENST00000565633.1_1_16:88729753-88737893:+|nuORF	ENST00000565633.1_1_16:88729753-88737893:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957763671875	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.86791	1	3999	3999		28.254	7.7724	1	581270			65898	13864	43793	43811	74832	74832					0.08446074267988024
WPLQIRVA	8	Unmodified	_WPLQIRVA_					0	0	0		ENST00000565633.1_1_16:88729753-88737893:+|nuORF;ENST00000563261.5_1_16:88729708-88738384:+|nuORF	ENST00000565633.1_1_16:88729753-88737893:+|nuORF	ENST00000565633.1_1_16:88729753-88737893:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79571533203125	2	491.795269	981.575986	-0.12437	-6.1163E-05	0.93789	0.00046125	0.81352	0.00040009	491.7955803973609	45.417	1.3583	45.348	44.556	45.914	-0.06863					81	33	3	0	0	0	0.82419	1	3313	3313		13.775	0.81615	1	439300			65899	13864	43793	43811	74833	74833					0.08446074267988024
WPLQIRVA	8	Unmodified	_WPLQIRVA_					0	0	0		ENST00000565633.1_1_16:88729753-88737893:+|nuORF;ENST00000563261.5_1_16:88729708-88738384:+|nuORF	ENST00000565633.1_1_16:88729753-88737893:+|nuORF	ENST00000565633.1_1_16:88729753-88737893:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958679199219	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.884	1	3912	3912		33.516	6.7195	1	1502200			65900	13864	43793	43811	74834	74834					0.08446074267988024
WPLTGLVRA	9	Unmodified	_WPLTGLVRA_					0	0	0		ENST00000563678.1_1_16:31714490-31715590:+|nuORF	ENST00000563678.1_1_16:31714490-31715590:+|nuORF	ENST00000563678.1_1_16:31714490-31715590:+|nuORF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.7999572753906	2	506.800552	1011.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.926	1	42.926	42.426	43.426	0								0	0	0	0.32469	1	3010	3010		21.96	2.5999	1				65901	13875	43794	43812	74835	74835					0.08122056922422871
WPLTGLVRA	9	Unmodified	_WPLTGLVRA_					0	0	0		ENST00000563678.1_1_16:31714490-31715590:+|nuORF	ENST00000563678.1_1_16:31714490-31715590:+|nuORF	ENST00000563678.1_1_16:31714490-31715590:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	507.3000793457031	2	506.800552	1011.58655	-0.49867	-0.00025273	1.4784	0.00074926	0.97973	0.00049653	506.80125930962566	45.611	0.78478	45.623	45.395	46.179	0.012058					40	21	2	0	0	0	0.78536	1	3333	3333		29.15	3.6994	1	207840			65902	13875	43794	43812	74836	74836					0.08122056922422871
WPLVELLNITR	11	Unmodified	_WPLVELLNITR_					0	0	0			REV__ENSG00000179363|ENST00000319560|TMEM31	REV__ENSG00000179363|ENST00000319560|TMEM31	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9328918457031	3	451.934484	1352.78162	-1.7713	-0.0008005	-2.1778	-0.00098423	-3.9491	-0.0017847	451.93340802352935	100.57	2.3737	100.74	99.884	102.26	0.17199					164	56	4	0	0	0	0.73277	1	10424	10424		25.892	1.6599	1	618930	+		65903	22333	43795	43813	74837	74837					0.11934182936715843
WPMKPLLPVP	10	Unmodified	_WPMKPLLPVP_					0	0	0			REV__ENST00000326294.3_1_11:67203005-67203194:-|nuORF	REV__ENST00000326294.3_1_11:67203005-67203194:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3425903320312	2	589.343738	1176.67292	0.15554	9.1664E-05	-1.4167	-0.00083494	-1.2612	-0.00074328	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.86763	1	11153	11153		26.693	1.1189	1	10540000	+		65904	25076	43796	43814	74838	74838					0.0916530043275543
WPMLDGHP	8	Oxidation (M)	_WPM(Oxidation (M))LDGHP_		WPM(1)LDGHP		WPM(47)LDGHP	0	0	1			REV__ENST00000256951.9_1_12:13368262-13368391:+|nuORF	REV__ENST00000256951.9_1_12:13368262-13368391:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.7184753417969	2	484.71837	967.422187	-0.725	-0.00035142	0.46197	0.00022392	-0.26304	-0.0001275	484.71847241575296	100.07	1.4337	100.28	99.734	101.17	0.21511					64	33	3	0	0	0	0.92176	1	10437	10437		46.766	13.954	1	545270	+		65905	24334	43797	43815	74839	74839		380			-0.06282703559827496
WPMLDGHP	8	Oxidation (M)	_WPM(Oxidation (M))LDGHP_		WPM(1)LDGHP		WPM(47)LDGHP	0	0	1			REV__ENST00000256951.9_1_12:13368262-13368391:+|nuORF	REV__ENST00000256951.9_1_12:13368262-13368391:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.7184753417969	2	484.71837	967.422187	1.6171	0.00078385	-1.8628	-0.00090295	-0.2457	-0.00011909	484.71738112823056	98.635	3.9598	98.996	95.447	99.407	0.36136					188	96	2	0	0	0	0.92176	1	11687	11687		46.766	7.9603	1	7541600	+		65906	24334	43797	43815	74840	74840		380			-0.06282703559827496
WPMRLRKPS	9	Unmodified	_WPMRLRKPS_					0	0	0			REV__ENST00000369478.3_1_1:117297160-117297342:+|nuORF	REV__ENST00000369478.3_1_1:117297160-117297342:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	586.3346557617188	2	585.83186	1169.64917	-1.7612	-0.0010318	-1.1346	-0.00066468	-2.8958	-0.0016964	585.83107982543	57.473	1.4426	57.507	57.139	58.581	0.033909					83	46	2	0	0	0	0.7932	1	5219	5219		23.042	0.46283	1	158750	+		65907	25621	43798	43816	74841	74841					0.07112879718965814
WPNRIRILKQL	11	Unmodified	_WPNRIRILKQL_					0	0	0			REV__nc|ENSG00000162909|P17655-2|CAPN2	REV__nc|ENSG00000162909|P17655-2|CAPN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	479.6319580078125	3	479.633139	1435.87759	-0.64531	-0.00030951	-0.13655	-6.5493E-05	-0.78186	-0.00037501	479.6327456519026	19.64	1.5407	19.01	18.62	20.161	-0.6296					70	33	3	0	0	0	0.76251	1	538	538		19.263	0.73163	1	180800	+		65908	20861	43799	43817	74842	74842					0.17708375567485746
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.79632568359375	2	491.795269	981.575986	-1.5825	-0.00077825	2.4729	0.0012162	0.89044	0.00043792	491.79635524808845	46.551	2.007	46.551	45.815	47.822	0					188	64	4	0	0	0	0.86288	1	3607	3607		26.796	1.3459	1	2891800	+		65909	23682	43800	43818	74843	74843					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7955627441406	2	491.795269	981.575986	-1.5463	-0.00076044	2.5582	0.0012581	1.0119	0.00049767	491.7963891890307	48.42	4.27	48.42	47.753	52.023	0					293	108	4	0	0	0	0.88915	1	4054	4054		35.201	4.6971	1	1240000	+		65910	23682	43800	43818	74844	74844					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7956237792969	2	491.795269	981.575986	-1.4502	-0.0007132	2.5925	0.001275	1.1423	0.00056177	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.86791	1	4793	4793		28.254	4.0515	1	1043600	+		65911	23682	43800	43818	74845	74845					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.795166015625	2	491.795269	981.575986	0.28747	0.00014138	-0.50783	-0.00024975	-0.22036	-0.00010837	491.7949445341918	43.378	1.3778	43.351	42.925	44.303	-0.026764					56	32	2	0	0	0	0.86288	1	3321	3321		26.796	1.3459	1	173750	+		65912	23682	43800	43818	74846	74846					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79583740234375	2	491.795269	981.575986	0.16895	8.3091E-05	0.70742	0.00034791	0.87638	0.000431	491.795491652363	46.653	1.8507	46.639	45.976	47.827	-0.013821					152	52	4	0	0	0	0.88915	1	3800	3800		35.201	9.7505	1	2674700	+		65913	23682	43800	43818	74847	74847					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7955627441406	2	491.795269	981.575986	0.09879	4.8585E-05	0.95013	0.00046727	1.0489	0.00051585	491.7955946016824	48.233	3.0203	48.226	47.765	50.786	-0.0063515					208	76	4	0	0	0	0.86791	3	3945	3945;4125;4205		35.201	4.0515	1	1349600	+		65914	23682	43800	43818	74848;74849;74850	74848					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.7958679199219	2	491.795269	981.575986	-0.035071	-1.7248E-05	1.1757	0.00057819	1.1406	0.00056094	491.7958032257754	55.27	1.7611	55.262	54.503	56.264	-0.0077095					140	52	4	0	0	0	0.81548	1	4997	4997		20.482	1.1219	1	1625300	+		65915	23682	43800	43818	74851	74851					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79559326171875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.791	1	56.779	56.279	57.279	-0.012203								0	0	0	0.29694	1	5102	5102		37.028	5.0736	1		+		65916	23682	43800	43818	74852	74852					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79638671875	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.868	1	56.856	56.356	57.356	-0.012203								0	0	0	0.30004	1	5113	5113		21.702	1.2205	1		+		65917	23682	43800	43818	74853	74853					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	491.79595947265625	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.804	1	59.791	59.291	60.291	-0.013729								0	0	0	0.29353	1	5503	5503		28.254	4.0515	1		+		65918	23682	43800	43818	74854	74854					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7955322265625	2	491.795269	981.575986	-0.67834	-0.0003336	1.6265	0.00079993	0.94821	0.00046632	491.7959245750991	48.337	2.607	48.312	47.732	50.339	-0.025112					193	61	4	0	0	0	0.82464	6	4116	4045;4116;4140;4176;4214;4262		37.028	4.8362	1	1111900	+		65919	23682	43800	43818	74855;74856;74857;74858;74859;74860	74856					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7955322265625	2	491.795269	981.575986	-0.58221	-0.00028633	1.5843	0.00077916	1.0021	0.00049284	491.79594997813496	52.994	2.9416	52.97	51.821	54.763	-0.023849					194	76	4	0	0	0	0.88915	1	4913	4913		35.201	14.719	1	792830	+		65920	23682	43800	43818	74861	74861					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7958679199219	2	491.795269	981.575986	-0.36021	-0.00017715	1.3022	0.0006404	0.94195	0.00046325	491.79587618632917	55.368	1.5692	55.341	54.702	56.271	-0.027279					123	47	4	0	0	0	0.86791	1	5018	5018		28.254	2.8041	1	1374900	+		65921	23682	43800	43818	74862	74862					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	491.7937927246094	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.952	1	67.916	67.416	68.416	-0.036301								0	0	0	0.29498	1	6538	6538		26.796	1.3459	1		+		65922	23682	43800	43818	74863	74863					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958984375	2	491.795269	981.575986	-2.0246	-0.0009957	2.587	0.0012723	0.56235	0.00027656	491.79643169128343	45.478	1.3283	45.474	44.66	45.989	-0.0041618					90	30	4	0	0	0	0.86791	1	3613	3613		28.254	1.4582	1	433340	+		65923	23682	43800	43818	74864	74864					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7958679199219	2	491.795269	981.575986	-1.7104	-0.00084119	2.5857	0.0012716	0.87523	0.00043043	491.7964546691234	48.434	2.9667	48.434	47.803	50.769	0.00016785					227	73	4	0	0	0	0.81548	2	4222	4149;4222		46.766	13.251	1	1232600	+		65924	23682	43800	43818	74865;74866	74866					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7960510253906	2	491.795269	981.575986	-1.7961	-0.00088329	2.9764	0.0014638	1.1803	0.00058047	491.7966581870457	51.567	1.6539	51.579	50.697	52.351	0.012436					117	46	3	0	0	0	0.86288	2	4447	4426;4447		33.516	4.8362	1	354980	+		65925	23682	43800	43818	74867;74868	74868					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.79595947265625	2	491.795269	981.575986	-1.8635	-0.00091647	2.8389	0.0013961	0.97536	0.00047968	491.79657831843144	53.014	2.4015	53.031	52.091	54.493	0.017487					150	65	3	0	0	0	0.86791	2	4564	4564;4649		37.028	6.5248	1	703950	+		65926	23682	43800	43818	74869;74870	74869					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.796142578125	2	491.795269	981.575986	-2.0878	-0.0010268	2.9764	0.0014638	0.88855	0.00043698	491.7967193954188	55.305	1.7211	55.332	54.502	56.224	0.027138					125	48	4	0	0	0	0.86791	1	4932	4932		28.254	2.6802	1	1484300	+		65927	23682	43800	43818	74871	74871					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7961120605469	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.051	1	59.085	58.585	59.585	0.033905								0	0	0	0.29353	1	5438	5438		28.254	4.0515	1		+		65928	23682	43800	43818	74872	74872					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7966613769531	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.674	1	59.707	59.207	60.207	0.032822								0	0	0	0.29498	1	5522	5522		26.796	1.3459	1		+		65929	23682	43800	43818	74873	74873					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.7959899902344	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.741	1	59.774	59.274	60.274	0.032822								0	0	0	0.30004	1	5531	5531		21.702	2.3424	1		+		65930	23682	43800	43818	74874	74874					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7951354980469	2	491.795269	981.575986	-0.71756	-0.00035289	1.644	0.00080852	0.92645	0.00045562	491.7959560253495	46.477	1.8357	46.493	45.827	47.662	0.015511					168	53	4	0	0	0	0.83466	2	3346	3346;3519		33.516	13.034	1	2747400	+		65931	23682	43800	43818	74875;74876	74875					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7955627441406	2	491.795269	981.575986	-0.71316	-0.00035073	1.7852	0.00087796	1.0721	0.00052723	491.7960564863565	48.311	2.8075	48.333	47.669	50.477	0.022274					231	76	4	0	0	0	0.86791	1	3716	3716		28.254	1.4582	1	1219600	+		65932	23682	43800	43818	74877	74877					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7962951660156	2	491.795269	981.575986	-0.71044	-0.00034939	1.6504	0.00081164	0.93993	0.00046225	491.7961166252821	50.793	2.2358	50.823	50.252	52.487	0.029633					115	70	2	0	0	0	0.86791	2	4074	3968;4074		33.516	2.8041	1	571510	+		65933	23682	43800	43818	74878;74879	74879					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7958984375	2	491.795269	981.575986	-0.70573	-0.00034708	1.5523	0.0007634	0.84654	0.00041632	491.7958950012748	53.186	2.5351	53.234	52.193	54.728	0.047802					215	85	3	0	0	0	0.86791	1	4428	4428		28.254	1.4582	1	772710	+		65934	23682	43800	43818	74880	74880					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.7965087890625	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.681	1	59.775	59.275	60.275	0.094059								0	0	0	0.30004	1	5125	5125		21.702	1.2205	1		+		65935	23682	43800	43818	74881	74881					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7957458496094	2	491.795269	981.575986	0.29464	0.0001449	0.55726	0.00027406	0.8519	0.00041896	491.7954245147593	45.248	1.2335	45.291	44.693	45.927	0.042599					75	30	3	0	0	0	0.86288	1	3244	3244		26.796	7.4361	1	440250	+		65936	23682	43800	43818	74882	74882					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7953796386719	2	491.795269	981.575986	0.32756	0.00016109	0.56925	0.00027995	0.8968	0.00044104	491.7954752118613	48.453	2.7633	48.491	47.766	50.529	0.037731					226	73	4	0	0	0	0.86288	2	3738	3738;3879		46.766	16.263	1	1346800	+		65937	23682	43800	43818	74883;74884	74883					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7958068847656	2	491.795269	981.575986	0.34914	0.0001717	0.80555	0.00039616	1.1547	0.00056787	491.7956274891571	51.085	2.0808	51.135	50.487	52.567	0.049896					150	66	3	0	0	0	0.88915	1	4109	4109		35.201	6.9464	1	581270	+		65938	23682	43800	43818	74885	74885					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7958984375	2	491.795269	981.575986	0.36727	0.00018062	0.46726	0.0002298	0.83453	0.00041042	491.7953619064281	53.14	2.4259	53.211	52.36	54.786	0.070713					180	67	3	0	0	0	0.87276	1	4275	4275		29.842	3.0454	1	748320	+		65939	23682	43800	43818	74886	74886					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7955322265625	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.86791	1	4622	4622		28.254	0.37203	1	2075300	+		65940	23682	43800	43818	74887	74887					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.79620361328125	2	491.795269	981.575986	0.42504	0.00020903	0.32902	0.00016181	0.75406	0.00037084	491.7954861357076	59.345	2.1315	59.459	58.989	61.12	0.11396					113	74	3	0	0	0	0.87276	1	5125	5125		29.842	6.7991	1	139720	+		65941	23682	43800	43818	74888	74888					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7958679199219	2	491.795269	981.575986	-0.05486	-2.698E-05	0.17817	8.7624E-05	0.12331	6.0644E-05	491.79521966656876	43.339	1.2355	43.289	42.859	44.095	-0.050308					43	29	2	0	0	0	0.87276	1	2979	2979		29.842	4.2675	1	209020	+		65942	23682	43800	43818	74889	74889					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79559326171875	2	491.795269	981.575986	-0.17405	-8.5598E-05	1.0809	0.00053159	0.90686	0.00044599	491.7956776905777	46.487	2.0797	46.408	45.64	47.72	-0.079002					181	62	4	0	0	0	0.81548	1	3488	3488		20.482	2.1574	1	2994900	+		65943	23682	43800	43818	74890	74890					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7957458496094	2	491.795269	981.575986	-0.25318	-0.00012451	1.23	0.0006049	0.97679	0.00048038	491.7957650972473	48.401	2.8358	48.308	47.647	50.482	-0.093178					220	72	4	0	0	0	0.82464	3	3675	3675;3706;3900		37.028	6.5519	1	1502200	+		65944	23682	43800	43818	74891;74892;74893	74891					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.795654296875	2	491.795269	981.575986	-0.344	-0.00016918	1.523	0.00074899	1.179	0.00057981	491.79593178229516	51.311	2.0651	51.227	50.432	52.497	-0.084534					149	62	3	0	0	0	0.93529	1	3974	3974		52.299	24.045	1	412030	+		65945	23682	43800	43818	74894	74894					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7957458496094	2	491.795269	981.575986	-0.41148	-0.00020237	1.3216	0.00064997	0.91013	0.0004476	491.7957849405117	53.143	2.1232	53.081	52.454	54.577	-0.062065					160	58	4	0	0	0	0.82464	1	4281	4281		21.702	2.3424	1	887820	+		65946	23682	43800	43818	74895	74895					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7956848144531	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.86791	1	4691	4691		28.254	4.0515	1	1898900	+		65947	23682	43800	43818	74896	74896					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7923278808594	2	491.795269	981.575986	-0.53143	-0.00026136	1.9035	0.00093611	1.372	0.00067476	491.79619139735206	56.69	1.2684	56.664	56.294	57.562	-0.026108					93	62	2	0	0	0	0.81548	1	4762	4762		20.482	1.1219	1	1036100	+		65948	23682	43800	43818	74897	74897					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7962646484375	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.711	1	59.711	59.211	60.211	0.00051117								0	0	0	0.29353	1	5140	5140		28.254	8.8943	1		+		65949	23682	43800	43818	74898	74898					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.79595947265625	2	491.795269	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.613	1	60.621	60.121	61.121	0.0081177								0	0	0	0.29353	1	5258	5258		28.254	7.7724	1		+		65950	23682	43800	43818	74899	74899					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7955322265625	2	491.795269	981.575986	-1.0095	-0.00049646	1.2929	0.00063585	0.28344	0.00013939	491.79577391563464	44.834	1.3425	45.297	44.375	45.717	0.46313					102	32	4	0	0	0	0.86791	2	4107	4107;4159		28.254	5.2118	1	7709100	+		65951	23682	43800	43818	74900;74901	74900					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7957458496094	2	491.795269	981.575986	-1.1725	-0.00057664	2.0381	0.0010023	0.86553	0.00042567	491.7961165208382	46.106	2.2152	46.577	46.173	48.388	0.47139					127	54	3	0	0	0	0.86791	1	4442	4442		28.254	5.2118	1	3001500	+		65952	23682	43800	43818	74902	74902					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.7958984375	2	491.795269	981.575986	-0.48962	-0.00024079	1.5802	0.00077716	1.0906	0.00053636	491.7959072795416	52.767	1.4912	53.191	52.596	54.087	0.42348					103	35	4	0	0	0	0.9159	1	5326	5326		44.531	20.328	1	2146400	+		65953	23682	43800	43818	74903	74903					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79150390625	2	491.795269	981.575986	-1.9178	-0.00094317	0.68391	0.00033634	-1.2339	-0.00060683	491.795512765235	43.373	1.1256	44.147	43.54	44.665	0.77379					67	27	3	0	0	0	0.88915	1	3971	3971		35.201	10.998	1	1540600	+		65954	23682	43800	43818	74904	74904					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79656982421875	2	491.795269	981.575986	0.72275	0.00035544	0.16401	8.0661E-05	0.88676	0.00043611	491.79524952616435	50.532	2.1367	51.283	50.465	52.601	0.75174					133	51	3	0	0	0	0.9159	1	4994	4994		44.531	5.2782	1	1359500	+		65955	23682	43800	43818	74905	74905					0.08446074267976655
WPNRLLAI	8	Unmodified	_WPNRLLAI_					0	0	0			REV__nc|ENSG00000215305|Q9H269-2|VPS16	REV__nc|ENSG00000215305|Q9H269-2|VPS16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7962951660156	2	491.795269	981.575986	-0.16137	-7.9361E-05	1.242	0.0006108	1.0806	0.00053144	491.795730554191	52.394	1.7298	53.062	52.517	54.247	0.6673					112	41	4	0	0	0	0.86288	2	5246	5246;5318		28.254	2.8041	1	2437000	+		65956	23682	43800	43818	74906;74907	74906					0.08446074267976655
WPNVLMVEP	9	Unmodified	_WPNVLMVEP_					0	0	0			REV__ENST00000381477.7_1_9:5908925-5909063:+|nuORF	REV__ENST00000381477.7_1_9:5908925-5909063:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	542.7791748046875	2	542.778428	1083.5423	-0.23421	-0.00012713	2.6004	0.0014114	2.3662	0.0012843	542.779695824281	34.398	0.83688	34.401	34.057	34.894	0.0026054					54	19	4	0	0	0	0.62081	1	2128	2128		45.952	7.1458	1	451720	+		65957	25967	43801	43819	74908	74908					0.003872847139064106
WPPPLYILQ	9	Unmodified	_WPPPLYILQ_					0	0	0			REV__chr12:50078127-50078418|41|11.95|0.48|4.62|+|0|ASIC1,None|1	REV__chr12:50078127-50078418|41|11.95|0.48|4.62|+|0|ASIC1,None|1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	563.81640625	2	563.81841	1125.62227	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.015	1	56.015	55.515	56.515	0								0	0	0	0.31088	1	4783	4783		26.796	0	1		+		65958	15538	43802	43820	74909	74909					0.06448094379402391
WPPSLHSPGQL	11	Unmodified	_WPPSLHSPGQL_					0	0	0			REV__ENST00000268171.7_1_15:91411933-91418977:+|nuORF	REV__ENST00000268171.7_1_15:91411933-91418977:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.8789978027344	3	406.880379	1217.61931	0.020852	8.4844E-06	-2.8977	-0.001179	-2.8768	-0.0011705	406.879159642832	19.32	1.0891	18.69	18.401	19.49	-0.6296					52	23	4	0	0	0	0.61824	1	515	515		42.338	2.2799	1	910950	+		65959	24512	43803	43821	74910	74910					0.019202192546117658
WPPSLHSPGQL	11	Unmodified	_WPPSLHSPGQL_					0	0	0			REV__ENST00000268171.7_1_15:91411933-91418977:+|nuORF	REV__ENST00000268171.7_1_15:91411933-91418977:+|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	406.880379	1217.61931	-2.164	-0.00088048	-0.032653	-1.3286E-05	-2.1966	-0.00089377	406.880109394425	18.929	0.26063	18.929	18.784	19.045	0	0.11936	0.0034176	NaN	42.338	9	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10684	+		65960	24512	43803	43821							0.019202192546117658
WPQPEVLL	8	Unmodified	_WPQPEVLL_					0	0	0			REV__ENSG00000186666|ENST00000333924|BCDIN3D	REV__ENSG00000186666|ENST00000333924|BCDIN3D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	491.2696228027344	2	491.273835	980.533118	-0.13117	-6.444E-05	-4.2166	-0.0020715	-4.3478	-0.0021359	491.27160884615785	53.609	0.58157	54.023	53.745	54.326	0.4139					32	13	3	0	0	0	0.79403	1	5424	5424		63.306	4.5243	1	895060	+		65961	22873	43804	43822	74911	74911					0.04207259419899856
WPQRPGRW	8	Unmodified	_WPQRPGRW_					0	0	0		nc|ENSG00000167680|Q9H3T3-3|SEMA6B	nc|ENSG00000167680|Q9H3T3-3|SEMA6B	nc|ENSG00000167680|Q9H3T3-3|SEMA6B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7847900390625	2	541.785767	1081.55698	0.62478	0.0003385	-1.5583	-0.00084426	-0.93352	-0.00050577	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.9159	1	5319	5319		44.531	0.41427	1	5802700			65962	15075	43805	43823	74912	74912					0.019465376969492354
WPRGDEAP	8	Unmodified	_WPRGDEAP_					0	0	0		ENSG00000111249|ENST00000261726|CUX2	ENSG00000111249|ENST00000261726|CUX2	ENSG00000111249|ENST00000261726|CUX2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2166442871094	2	464.219591	926.42463	-1.3674	-0.00063479	1.614	0.00074927	0.24659	0.00011447	464.2199850018243	35.798	0.91559	35.807	35.34	36.256	0.0092812					41	19	3	0	0	0	0.89494	1	2259	2259		37.159	0	1	116880			65963	2562	43806	43824	74913	74913					-0.041525318305275505
WPRRRRRWRP	10	Unmodified	_WPRRRRRWRP_					0	0	0			REV__ENST00000535818.1_1_11:60906157-60928919:-|nuORF	REV__ENST00000535818.1_1_11:60906157-60928919:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	507.96942138671875	3	507.967738	1520.88138	-0.52677	-0.00026758	3.9731	0.0020182	3.4463	0.0017506	507.9697227383378	16.604	0.60131	16.652	16.484	17.086	0.047802					78	25	5	0	0	0	0.91151	1	176	176		7.3997	0	1	1148900	+		65964	28396	43807	43825	74914	74914					0.14177902904566508
WPRSIKKKKKK	11	Unmodified	_WPRSIKKKKKK_					0	0	0			REV__AluSq2_dup64|chr1:1468987-1469304:+|2.991366951907252|0.0058541083686269|9.0|63.0|8|3|sense	REV__AluSq2_dup64|chr1:1468987-1469304:+|2.991366951907252|0.0058541083686269|9.0|63.0|8|3|sense	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.31890869140625	3	476.317151	1425.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.062	1	48.062	47.562	48.562	0								0	0	0	0.56276	1	3708	3708		12.433	0.97822	1		+		65965	15392	43808	43826	74915	74915					0.23369538981228288
WPRSIKKKKKK	11	Unmodified	_WPRSIKKKKKK_					0	0	0			REV__AluSq2_dup64|chr1:1468987-1469304:+|2.991366951907252|0.0058541083686269|9.0|63.0|8|3|sense	REV__AluSq2_dup64|chr1:1468987-1469304:+|2.991366951907252|0.0058541083686269|9.0|63.0|8|3|sense	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.3181457519531	3	476.317151	1425.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.562	1	46.558	46.058	47.058	-0.0041618								0	0	0	0.56276	1	3769	3769		8.7993	2.1397	1		+		65966	15392	43808	43826	74916	74916					0.23369538981228288
WPRSIKKKKKK	11	Unmodified	_WPRSIKKKKKK_					0	0	0			REV__AluSq2_dup64|chr1:1468987-1469304:+|2.991366951907252|0.0058541083686269|9.0|63.0|8|3|sense	REV__AluSq2_dup64|chr1:1468987-1469304:+|2.991366951907252|0.0058541083686269|9.0|63.0|8|3|sense	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.31817626953125	3	476.317151	1425.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.36	1	47.356	46.856	47.856	-0.0041618								0	0	0	0.56276	1	3880	3880		21.78	9.8481	1		+		65967	15392	43808	43826	74917	74917					0.23369538981228288
WPSGRVLVL	9	Unmodified	_WPSGRVLVL_					0	0	0			REV__ENST00000320631.7_1_11:64620623-64620911:-|nuORF	REV__ENST00000320631.7_1_11:64620623-64620911:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.80859375	2	513.808377	1025.6022	-0.12671	-6.5103E-05	1.3179	0.00067714	1.1912	0.00061204	513.8089237253463	48.041	1.5863	48.038	47.599	49.185	-0.002449					113	44	4	0	0	0	0.7932	1	4123	4123		26.693	6.2111	1	1731500	+		65968	25001	43809	43827	74918	74918					0.0904234343945518
WPSGRVLVL	9	Unmodified	_WPSGRVLVL_					0	0	0			REV__ENST00000320631.7_1_11:64620623-64620911:-|nuORF	REV__ENST00000320631.7_1_11:64620623-64620911:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8069458007812	2	513.808377	1025.6022	-0.18035	-9.2668E-05	1.1688	0.00060056	0.98848	0.00050789	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.78983	1	4134	4134		27.882	2.4321	1	1777300	+		65969	25001	43809	43827	74919	74919					0.0904234343945518
WPSGRVLVL	9	Unmodified	_WPSGRVLVL_					0	0	0			REV__ENST00000320631.7_1_11:64620623-64620911:-|nuORF	REV__ENST00000320631.7_1_11:64620623-64620911:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	513.8087768554688	2	513.808377	1025.6022	-0.38907	-0.00019991	1.6539	0.00084981	1.2649	0.0006499	513.8091392220557	47.902	1.7817	47.924	47.459	49.24	0.02227					140	49	4	0	0	0	0.7932	1	3790	3790		25.574	1.3713	1	1358900	+		65970	25001	43809	43827	74920	74920					0.0904234343945518
WPSLRAGG	8	Unmodified	_WPSLRAGG_					0	0	0			REV__ENSG00000172572|ENST00000359062|PDE3A	REV__ENSG00000172572|ENST00000359062|PDE3A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	422.2283630371094	2	422.22722	842.439886	0.73615	0.00031082	1.0409	0.00043948	1.777	0.0007503	422.22756865248357	54.832	1.4557	55.239	54.948	56.404	0.40663					59	34	3	0	0	0	0.87064	1	5598	5598		29.15	2.3535	1	872870	+		65971	21841	43810	43828	74921	74921					0.012363797573243573
WPSRGGAL	8	Unmodified	_WPSRGGAL_					0	0	0		ENST00000521436.5_1_8:22475932-22477192:+|nuORF	ENST00000521436.5_1_8:22475932-22477192:+|nuORF	ENST00000521436.5_1_8:22475932-22477192:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	422.2281188964844	2	422.22722	842.439886	-0.13065	-5.5165E-05	1.9429	0.00082033	1.8122	0.00076517	422.22796406117556	54.637	1.4643	55.205	54.858	56.322	0.56836					63	34	3	0	0	0	0.884	1	5600	5600		33.516	0.70317	1	943930			65972	13171	43811	43829	74922	74922					0.012363797573243573
WPSVKLRP	8	Unmodified	_WPSVKLRP_					0	0	0			REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7958984375	2	491.795269	981.575986	-1.6029	-0.00078829	2.358	0.0011597	0.75513	0.00037137	491.79627388078944	45.389	1.3634	45.389	44.577	45.941	0					90	33	3	0	0	0	0.84341	1	3353	3353		24.203	2.2429	1	603870	+		65973	24649	43812	43830	74923	74923					0.08446074267988024
WPSVKLRP	8	Unmodified	_WPSVKLRP_					0	0	0			REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	491.7960205078125	2	491.795269	981.575986	-1.4502	-0.0007132	2.5925	0.001275	1.1423	0.00056177	491.7964531361204	55.71	1.3312	55.71	55.066	56.397	0					129	42	4	0	0	0	0.87064	1	4809	4809		29.15	3.6994	1	1043600	+		65974	24649	43812	43830	74924	74924					0.08446074267988024
WPSVKLRP	8	Unmodified	_WPSVKLRP_					0	0	0			REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.7956848144531	2	491.795269	981.575986	0.38495	0.00018932	0.65669	0.00032296	1.0416	0.00051227	491.7955389837073	55.116	1.7678	55.207	54.545	56.313	0.091167					164	57	4	0	0	0	0.79929	1	4661	4661		18.324	0	1	2075300	+		65975	24649	43812	43830	74925	74925					0.08446074267988024
WPSVKLRP	8	Unmodified	_WPSVKLRP_					0	0	0			REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	491.7956848144531	2	491.795269	981.575986	-0.47857	-0.00023536	1.6261	0.00079971	1.1475	0.00056435	491.7959655015598	55.098	1.6906	55.048	54.454	56.145	-0.049271					171	56	4	0	0	0	0.91472	1	4665	4665		44.117	8.4985	1	1898900	+		65976	24649	43812	43830	74926	74926					0.08446074267988024
WPSVKLRP	8	Unmodified	_WPSVKLRP_					0	0	0			REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	REV__ENST00000288699.10_1_2:27171416-27171536:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7956848144531	2	491.795269	981.575986	-0.85536	-0.00042066	1.576	0.00077505	0.72059	0.00035438	491.79594594464555	45.253	0.48487	46.149	45.883	46.368	0.89542					30	11	3	0	0	0	0.85277	1	4231	4231		25.45	1.2474	1	6858700	+		65977	24649	43812	43830	74927	74927					0.08446074267988024
WPTHDDVIN	9	Unmodified	_WPTHDDVIN_					0	0	0			REV__nc|ENSG00000104853|O96005-3|CLPTM1	REV__nc|ENSG00000104853|O96005-3|CLPTM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.7566528320312	2	548.756538	1095.49852	0.1326	7.2765E-05	0.28624	0.00015707	0.41884	0.00022984	548.7566408137145	51.642	0.51817	51.676	51.511	52.029	0.034588					27	16	2	0	0	0	0.76764	1	4117	4117		34.173	0	1	120810	+		65978	17480	43813	43831	74928	74928					-0.04540608458864881
WPTLKRKP	8	Unmodified	_WPTLKRKP_					0	0	0			REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3165283203125	2	513.316369	1024.61818	-1.5202	-0.00078036	1.7283	0.00088716	0.20804	0.00010679	513.3171098240366	43.168	1.3566	43.168	42.754	44.111	0					83	32	4	0	0	0	0.87922	1	3078	3078		31.955	0	1	698430	+		65979	17874	43814	43832	74929	74929					0.10686049676360199
WPTLKRKP	8	Unmodified	_WPTLKRKP_					0	0	0			REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.3181762695312	2	513.316369	1024.61818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.598	1	53.592	53.092	54.092	-0.0053711								0	0	0	0.30811	1	4693	4693		45.952	8.7928	1		+		65980	17874	43814	43832	74930	74930					0.10686049676360199
WPTLKRKP	8	Unmodified	_WPTLKRKP_					0	0	0			REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3172607421875	2	513.316369	1024.61818	-0.36813	-0.00018897	1.0583	0.00054322	0.69013	0.00035425	513.3169589115231	53.646	1.4284	53.622	52.782	54.21	-0.024754					61	35	3	0	0	0	0.87922	1	4815	4815		31.955	2.8053	1	246220	+		65981	17874	43814	43832	74931	74931					0.10686049676360199
WPTLKRKP	8	Unmodified	_WPTLKRKP_					0	0	0			REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.3162231445312	2	513.316369	1024.61818	-0.86606	-0.00044456	0.65911	0.00033833	-0.20695	-0.00010623	513.3165332025184	43.367	1.6866	43.367	42.894	44.58	0.00016785					82	40	3	0	0	0	0.8347	1	3352	3352		23.042	0	1	411860	+		65982	17874	43814	43832	74932	74932					0.10686049676360199
WPTLKRKP	8	Unmodified	_WPTLKRKP_					0	0	0			REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	REV__ENST00000536997.1_1_12:68715294-68716924:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3170776367188	2	513.316369	1024.61818	-0.34905	-0.00017917	1.0647	0.00054651	0.71561	0.00036734	513.8184615031363	53.608	1.3919	53.546	53.049	54.441	-0.062065					64	37	3	0	0	0	0.87064	1	4423	4423		29.15	0	1	277190	+		65983	17874	43814	43832	74933	74933					0.10686049676360199
WPTRLPVK	8	Unmodified	_WPTRLPVK_					0	0	0			REV__ENSG00000139915|ENST00000399232|MDGA2	REV__ENSG00000139915|ENST00000399232|MDGA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.8027038574219	2	498.803094	995.591636	-0.60409	-0.00030132	1.8273	0.00091145	1.2232	0.00061013	498.80385406167085	51.818	2.1482	51.853	51.365	53.513	0.034584					171	72	4	0	0	0	0.87922	1	4321	4321		31.955	3.7006	1	2424700	+		65984	19582	43815	43833	74934	74934					0.09366360785031702
WPTRPKLK	8	Unmodified	_WPTRPKLK_					0	0	0			REV__chr17:10398640-10398768|46|181.0|0.42|8.74|-|1|MYH8,MYH8|3	REV__chr17:10398640-10398768|46|181.0|0.42|8.74|-|1|MYH8,MYH8|3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	513.3211059570312	2	513.316369	1024.61818	-1.3651	-0.00070072	2.2159	0.0011375	0.85085	0.00043675	513.3175456130648	53.876	2.1608	53.876	52.509	54.67	0					97	64	3	0	0	0	0.81724	1	4451	4451		14.664	0.52697	1	276500	+		65985	15647	43816	43834	74935	74935					0.10686049676337461
WPTRPKLK	8	Unmodified	_WPTRPKLK_					0	0	0			REV__chr17:10398640-10398768|46|181.0|0.42|8.74|-|1|MYH8,MYH8|3	REV__chr17:10398640-10398768|46|181.0|0.42|8.74|-|1|MYH8,MYH8|3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.318359375	2	513.316369	1024.61818	-0.40874	-0.00020981	1.1748	0.00060303	0.76602	0.00039321	513.3169683772445	55.191	1.5464	55.154	54.574	56.12	-0.036827					75	51	2	0	0	0	0.82658	1	4630	4630		21.96	0	1	226240	+		65986	15647	43816	43834	74936	74936					0.10686049676337461
WPTRPKLK	8	Unmodified	_WPTRPKLK_					0	0	0			REV__chr17:10398640-10398768|46|181.0|0.42|8.74|-|1|MYH8,MYH8|3	REV__chr17:10398640-10398768|46|181.0|0.42|8.74|-|1|MYH8,MYH8|3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.3161010742188	2	513.316369	1024.61818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.131	1	52.057	51.557	52.557	-0.074509								0	0	0	0.30252	1	4193	4193		19.36	1.0356	1		+		65987	15647	43816	43834	74937	74937					0.10686049676337461
WPTSLNAPA	9	Unmodified	_WPTSLNAPA_					0	0	0			REV__nc|ENSG00000122257|Q7Z6E9-2|RBBP6	REV__nc|ENSG00000122257|Q7Z6E9-2|RBBP6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	478.9745788574219	2	478.745442	955.476331	-1.2806	-0.00061306	0.81402	0.00038971	-0.46653	-0.00022335	478.74581458154074	49.278	0.52876	49.278	49.012	49.541	0.00016785					14	11	2	0	0	0	0.20789	1	4177	4177		25.45	0	1	77969	+		65988	18486	43817	43835	74938	74938					-0.0031878813664434347
WPVILKPKKLP	11	Unmodified	_WPVILKPKKLP_					0	0	0		ENST00000596242.5_1_19:4325153-4327208:-|nuORF;ENST00000602007.5_1_19:4325153-4327375:-|nuORF;ENSG00000178078|ENST00000594605|STAP2;nc|ENSG00000178078|Q9UGK3-2|STAP2	ENST00000596242.5_1_19:4325153-4327208:-|nuORF	ENST00000596242.5_1_19:4325153-4327208:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	440.2919616699219	3	440.291831	1317.85366	-1.6143	-0.00071074	3.3925	0.0014937	1.7783	0.00078296	440.2929975930263	58.275	1.2356	58.275	57.838	59.074	0					156	53	4	0	0	0	0.78391	1	5079	5079		14.694	4.5898	1	193800			65989	7181	43818	43836	74939	74939					0.20745142081113954
WPVPLHLP	8	Unmodified	_WPVPLHLP_					0	0	0			REV__ENST00000268251.12_1_16:8876558-8876786:+|nuORF	REV__ENST00000268251.12_1_16:8876558-8876786:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	479.7791748046875	2	479.779088	957.543623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.108	1	17.026	16.526	17.526	-0.0821								0	0	0	0.30553	1	205	205		16.705	0	1		+		65990	24516	43819	43837	74940	74940					0.06315286864992231
WPVPTDVSL	9	Unmodified	_WPVPTDVSL_					0	0	0		ENSG00000149256|ENST00000278550|TENM4	ENSG00000149256|ENST00000278550|TENM4	ENSG00000149256|ENST00000278550|TENM4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	507.2662353515625	2	507.26875	1012.52295	-0.00014672	-7.4428E-08	-1.3187	-0.00066896	-1.3189	-0.00066903	507.2686442685549	51.245	1.1988	51.68	51.409	52.607	0.43505					40	28	2	0	0	0	0.47272	1	5076	5076		53.351	7.3792	1	1415200			65991	5009	43820	43838	74941	74941					0.01718651694648088
WPVTQRLL	8	Unmodified	_WPVTQRLL_					0	0	0			REV__ENST00000510805.1_1_4:144480662-144481064:+|nuORF	REV__ENST00000510805.1_1_4:144480662-144481064:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.7998046875	2	506.800552	1011.58655	-0.4991	-0.00025294	1.3209	0.00066945	0.82183	0.00041651	506.8011482581911	44.494	2.6105	44.503	42.78	45.391	0.0084534					109	64	3	0	0	0	0.87479	1	3147	3147		30.504	1.3541	1	373670	+		65992	27962	43821	43839	74942	74942					0.08122056922411502
WPVTQRLL	8	Unmodified	_WPVTQRLL_					0	0	0			REV__ENST00000510805.1_1_4:144480662-144481064:+|nuORF	REV__ENST00000510805.1_1_4:144480662-144481064:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.7970886230469	2	506.800552	1011.58655	-0.49674	-0.00025175	1.6185	0.00082027	1.1218	0.00056852	506.8013355229327	46.548	1.4801	46.564	46.121	47.601	0.015511					75	41	2	0	0	0	0.87479	1	3426	3426		30.504	1.3541	1	188180	+		65993	27962	43821	43839	74943	74943					0.08122056922411502
WPWLLKLA	8	Unmodified	_WPWLLKLA_					0	0	0			REV__ENST00000456101.6_1_6:109766698-109772967:-|nuORF	REV__ENST00000456101.6_1_6:109766698-109772967:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8091430664062	2	513.810388	1025.60622	-0.30203	-0.00015519	-2.3669	-0.0012161	-2.6689	-0.0013713	513.8090358741171	52.318	1.9892	52.244	51.398	53.387	-0.074509					144	60	3	0	0	0	0.87276	1	4181	4181		29.842	6.7991	1	861580	+		65994	26951	43822	43840	74944	74944					0.0944443293317363
WPWLTEVQ	8	Unmodified	_WPWLTEVQ_					0	0	0			REV__nc|ENSG00000151914|Q03001|DST	REV__nc|ENSG00000151914|Q03001|DST	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	530.2808837890625	2	529.768917	1057.52328	-0.48429	-0.00025656	-4.2072	-0.0022289	-4.6915	-0.0024854	529.7667430890639	62.039	0.45341	62.069	61.833	62.287	0.029575					33	16	3	0	0	0	0.4196	1	5776	5776		37.159	0	1	227750	+		65995	20278	43823	43841	74945	74945					-0.0031792858549124503
WQAVVIALLVK	11	Unmodified	_WQAVVIALLVK_					0	0	0		ENSG00000164168|ENST00000296582|TMEM184C	ENSG00000164168|ENST00000296582|TMEM184C	ENSG00000164168|ENST00000296582|TMEM184C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.9333190917969	3	413.932303	1238.77508	-1.8924	-0.00078334	3.053	0.0012637	1.1605	0.00048038	413.93347709098015	44.87	2.8248	44.882	43.566	46.391	0.012058					191	71	4	0	0	0	0.79716	1	3258	3258		11.932	0	1	675440			65996	5931	43824	43842	74946	74946					0.1652428977602085
WQGSGLKLL	9	Unmodified	_WQGSGLKLL_					0	0	0			REV__nc|ENSG00000113303|Q6UX41-2|BTNL8	REV__nc|ENSG00000113303|Q6UX41-2|BTNL8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.291259765625	2	501.292559	1000.57057	-0.28392	-0.00014233	-3.9733	-0.0019918	-4.2572	-0.0021341	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.76764	1	10559	10559		34.173	1.3601	1	9038000	+		65997	29787	43825	43843	74947	74947					0.07030350685522535
WQKEKQLVTG	10	Unmodified	_WQKEKQLVTG_					0	0	0		ENST00000483823.1_1_3:88997907-88998639:+|nuORF	ENST00000483823.1_1_3:88997907-88998639:+|nuORF	ENST00000483823.1_1_3:88997907-88998639:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	608.8367919921875	2	608.837862	1215.66117	-0.14489	-8.8218E-05	-0.99259	-0.00060432	-1.1375	-0.00069254	608.8371154069557	110.53	1.2053	110.53	110.28	111.48	0					111	36	5	0	0	0	0.67571	1	11500	11500		45.972	15.655	1	1502000			65998	12523	43826	43844	74948	74948					0.06196774943123273
WQREQERHRHR	11	Unmodified	_WQREQERHRHR_					0	0	0			REV__nc|ENSG00000278259|Q96H55-4|MYO19	REV__nc|ENSG00000278259|Q96H55-4|MYO19	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.2328186035156	4	405.210898	1616.81449	0.59284	0.00024023	-0.85073	-0.00034473	-0.25789	-0.0001045	405.2099575991057	85.111	0.17343	85.26	85.167	85.34	0.14857					5	3	2	0	0	0	0.18216	1	8312	8312		14.086	5.2867	1	20705	+		65999	24033	43827	43845	74949	74949					0.030752028321330727
WQRGPLLGRLK	11	Unmodified	_WQRGPLLGRLK_					0	0	0			REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	REV__nc|ENSG00000136492|Q9BX63-2|BRIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	442.274658203125	3	441.938451	1322.79352	-1.4739	-0.00065135	4.427	0.0019565	2.9532	0.0013051	441.94028424164003	56.309	0.61998	56.381	55.844	56.464	0.071835					69	31	3	0	0	0	0.75457	1	4742	4742		21.032	1.7696	1	795270	+		66000	29873	43828	43846	74950	74950					0.1450384447059605
WQRYQHQWQRY	11	Unmodified	_WQRYQHQWQRY_					0	0	0		ENST00000577066.2_1_17:79004653-79005004:-|nuORF	ENST00000577066.2_1_17:79004653-79005004:-|nuORF	ENST00000577066.2_1_17:79004653-79005004:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.2691650390625	3	560.27104	1677.79129	-0.99732	-0.00055877	0.66765	0.00037407	-0.32966	-0.0001847	560.2707940734522	62.049	1.4043	62.049	61.738	63.143	0					86	66	2	0	0	0	0.84494	1	5506	5506		6.3209	0.31984	1	274880			66001	14061	43829	43847	74951	74951					-0.020492360051775904
WQSRTWRRRWW	11	Unmodified	_WQSRTWRRRWW_					0	0	0			REV__ENST00000554052.2_2_14:35515721-35519263:+|nuORF	REV__ENST00000554052.2_2_14:35515721-35519263:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	568.8531494140625	3	568.630791	1702.87055	0.86954	0.00049445	-0.29822	-0.00016958	0.57131	0.00032487	568.96629031074	102.21	0.22859	102.35	102.26	102.49	0.13523					6	5	2	0	0	0	0.18421	1	10744	10744		1.4188	1.4188	1	113350	+		66002	24605	43830	43848	74952	74952					0.0472245573962482
WQVGAKLKP	9	Unmodified	_WQVGAKLKP_					0	0	0			REV__ENST00000497010.1_1_1:45435697-45452248:-|nuORF	REV__ENST00000497010.1_1_1:45435697-45452248:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.8090209960938	2	513.808377	1025.6022	-0.39189	-0.00020136	1.5981	0.00082112	1.2062	0.00061976	513.8090785700621	52.186	2.6006	52.162	50.833	53.434	-0.023849					148	66	4	0	0	0	0.7932	1	4516	4516		21.96	1.4781	1	771120	+		66003	27761	43831	43849	74953	74953					0.0904234343945518
WRAGPAELGA	10	Unmodified	_WRAGPAELGA_					0	0	0			REV__ENST00000564440.5_1_15:72491670-72491994:-|nuORF	REV__ENST00000564440.5_1_15:72491670-72491994:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	514.7694091796875	2	514.269616	1026.52468	0.58068	0.00029863	-1.8324	-0.00094235	-1.2517	-0.00064372	514.2686133611016	76.853	0.54735	77.253	76.951	77.499	0.3997					28	19	2	0	0	0	0.86218	1	8741	8741		32.812	0.85756	1	444300	+		66004	28837	43832	43850	74954	74954					0.01247705503283214
WRCRRPFRRTR	11	Unmodified	_WRCRRPFRRTR_					0	0	0			REV__ENST00000313654.13_2_18:21422380-21422625:+|nuORF	REV__ENST00000313654.13_2_18:21422380-21422625:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.6329345703125	3	530.632138	1588.87458	-0.1572	-8.3416E-05	3.1079	0.0016492	2.9507	0.0015657	530.6337619453191	39.082	0.57687	39.093	38.846	39.423	0.010708					35	15	3	0	0	0	0.81407	1	2368	2368		8.4073	0.72786	1	224490	+		66005	24925	43833	43851	74955	74955					0.10370221961670723
WRCRRPFRRTR	11	Unmodified	_WRCRRPFRRTR_					0	0	0			REV__ENST00000313654.13_2_18:21422380-21422625:+|nuORF	REV__ENST00000313654.13_2_18:21422380-21422625:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.6325073242188	3	530.632138	1588.87458	0.26126	0.00013863	2.5634	0.0013602	2.8247	0.0014989	530.6332780122804	38.087	0.63107	38.029	37.743	38.374	-0.057915					38	19	3	0	0	0	0.81407	1	2225	2225		8.4073	1.7476	1	144660	+		66006	24925	43833	43851	74956	74956					0.10370221961670723
WRDFRPLEKRY	11	Unmodified	_WRDFRPLEKRY_					0	0	0		ENSG00000184675|ENST00000374869|AMER1;nc|ENSG00000184675|Q5JTC6-2|AMER1	ENSG00000184675|ENST00000374869|AMER1	ENSG00000184675|ENST00000374869|AMER1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	522.94970703125	3	522.616037	1564.82628	0.40873	0.00021361	-0.64539	-0.00033729	-0.23666	-0.00012368	522.6157011187903	54.664	0.42665	54.755	54.44	54.867	0.091167					17	11	2	0	0	0	0.77205	1	4534	4534		17.167	7.0628	1	199090			66007	7637	43834	43852	74957	74957					0.06646006802770899
WRDVKKTGFV	10	Unmodified	_WRDVKKTGFV_					0	0	0		ENST00000543123.1_1_11:63449027-63517671:+|nuORF;nc|ENSG00000133318|O95197-6|RTN3;nc|ENSG00000133318|O95197-3|RTN3;nc|ENSG00000133318|O95197-5|RTN3;nc|ENSG00000133318|O95197-4|RTN3;nc|ENSG00000133318|O95197-7|RTN3;nc|ENSG00000133318|O95197-2|RTN3;ENSG00000133318|ENST00000377819|RTN3	ENST00000543123.1_1_11:63449027-63517671:+|nuORF	ENST00000543123.1_1_11:63449027-63517671:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3466186523438	2	618.348397	1234.68224	-0.1645	-0.00010172	-3.7425	-0.0023141	-3.907	-0.0024159	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.86348	1	9987	9987		31.53	2.3803	1	511870			66008	3874	43835	43853	74958	74958					0.07428785042657182
WRDYDRYYERN	11	Unmodified	_WRDYDRYYERN_					0	0	0		ENSG00000091009|ENST00000265271|RBM27	ENSG00000091009|ENST00000265271|RBM27	ENSG00000091009|ENST00000265271|RBM27	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	546.2474365234375	3	545.914811	1634.7226	-0.67499	-0.00036849	-2.4905	-0.0013596	-3.1655	-0.0017281	545.9135952528791	26.434	0.85336	26.177	25.813	26.666	-0.25721					48	18	5	0	0	0	0.81219	1	1440	1440		8.7993	0.76496	1	301430			66009	1663	43836	43854	74959	74959					-0.06936945095526426
WREARKLWWWS	11	Unmodified	_WREARKLWWWS_					0	0	0		ENST00000381989.3_1_13:25072288-25074457:-|nuORF	ENST00000381989.3_1_13:25072288-25074457:-|nuORF	ENST00000381989.3_1_13:25072288-25074457:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.7872924804688	3	535.280877	1602.8208	-0.36663	-0.00019625	-4.3789	-0.0023439	-4.7455	-0.0025402	535.2793240095772	77.671	0.73814	78.24	77.968	78.706	0.56836					22	17	2	0	0	0	0.18034	1	8909	8909		16.53	3.5724	1	315990			66010	10966	43837	43855	74960	74960					0.04350328010968951
WRFIRNWQRWH	11	Unmodified	_WRFIRNWQRWH_					0	0	0			REV__ENSG00000081248|ENST00000362061|CACNA1S	REV__ENSG00000081248|ENST00000362061|CACNA1S	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.224853515625	4	421.973459	1683.86473	1.3245	0.0005589	2.428	0.0010245	3.7524	0.0015834	421.9737176133521	62.344	0.67767	62.372	62.218	62.896	0.028133					46	31	2	0	0	0	0.18191	1	5817	5817		6.3209	4.9021	1	101810	+		66011	16822	43838	43856	74961	74961					0.050153572279441505
WRFIRNWQRWH	11	Unmodified	_WRFIRNWQRWH_					0	0	0			REV__ENSG00000081248|ENST00000362061|CACNA1S	REV__ENSG00000081248|ENST00000362061|CACNA1S	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		4	421.973459	1683.86473	-1.5537	-0.00065562	12.042	0.0050815	10.489	0.0044259	421.9790994704351	62.494	0.58949	62.494	62.191	62.78	0	-0.0034075	0.0055921	NaN	6.3209	41	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89593	+		66012	16822	43838	43856							0.050153572279441505
WRFIRNWQRWH	11	Unmodified	_WRFIRNWQRWH_					0	0	0			REV__ENSG00000081248|ENST00000362061|CACNA1S	REV__ENSG00000081248|ENST00000362061|CACNA1S	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		4	421.973459	1683.86473	-0.1883	-7.9459E-05	7.4473	0.0031425	7.259	0.0030631	421.9764789857205	62.641	0.73271	62.635	62.186	62.919	-0.0055504	0.13785	-0.0021637	NaN	6.3209	52	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103680	+		66013	16822	43838	43856							0.050153572279441505
WRFIRNWQRWH	11	Unmodified	_WRFIRNWQRWH_					0	0	0			REV__ENSG00000081248|ENST00000362061|CACNA1S	REV__ENSG00000081248|ENST00000362061|CACNA1S	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		4	421.973459	1683.86473	-1.8061	-0.00076213	10.437	0.004404	8.6306	0.0036419	421.9777788126628	62.375	0.65741	62.488	62.209	62.867	0.11388	-0.0089186	0.0028822	NaN	6.3209	42	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136430	+		66014	16822	43838	43856							0.050153572279441505
WRFLMPQT	8	Unmodified	_WRFLMPQT_					0	0	0		ENST00000490115.5_1_3:48576700-48581056:-|nuORF	ENST00000490115.5_1_3:48576700-48581056:-|nuORF	ENST00000490115.5_1_3:48576700-48581056:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.8075561523438	2	539.778762	1077.54297	-0.075172	-4.0576E-05	0.767	0.00041401	0.69183	0.00037343	539.7794545738362	55.557	0.33093	56.125	55.95	56.281	0.56836					11	7	2	0	0	0	0.4196	1	5736	5736		37.159	20.686	1	184100			66015	12663	43839	43857	74962	74962					0.007301241536424641
WRFRRWLIFKM	11	Unmodified	_WRFRRWLIFKM_					0	0	0			REV__nc|ENSG00000135636|O75923-3|DYSF	REV__nc|ENSG00000135636|O75923-3|DYSF	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.9783325195312	3	546.978252	1637.91293	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.324	1	29.324	28.824	29.824	0								0	0	0	0.56276	1	1264	1264		6.001	4.4781	1		+		66016	29867	43840	43858	74963	74963					0.11948714823620321
WRFVRGGKV	9	Unmodified	_WRFVRGGKV_					0	0	0			REV__chr1:31919658-31937755|27|11.67|0.13|6.44|-|0|PTP4A2,PTP4A2|1	REV__chr1:31919658-31937755|27|11.67|0.13|6.44|-|0|PTP4A2,PTP4A2|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	552.822265625	2	552.824892	1103.63523	0.24223	0.00013391	-1.2516	-0.00069193	-1.0094	-0.00055802	552.8240262062169	77.847	0.71408	77.971	77.695	78.409	0.12485					57	23	3	0	0	0	0.72402	1	7347	7347		38.806	0	1	625310	+		66017	15447	43841	43859	74964	74964					0.08755970282186354
WRGDRLAGY	9	Unmodified	_WRGDRLAGY_					0	0	0			REV__ENSG00000116032|ENST00000234389|GRIN3B	REV__ENSG00000116032|ENST00000234389|GRIN3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.27978515625	2	547.280515	1092.54648	0.42612	0.0002332	-1.8942	-0.0010366	-1.4681	-0.00080344	547.2793249693905	26.828	0.98989	26.79	26.483	27.473	-0.038525					50	23	3	0	0	0	0.64922	1	1248	1248		44.117	3.3386	1	181010	+		66018	18173	43842	43860	74965	74965					0.003905102518729109
WRGRRCLI	8	Unmodified	_WRGRRCLI_					0	0	0			REV__nc|ENSG00000048162|Q9Y3C1-3|NOP16	REV__nc|ENSG00000048162|Q9Y3C1-3|NOP16	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.3058471679688	2	530.30327	1058.59199	1.1047	0.00058581	3.2733	0.0017358	4.378	0.0023217	530.3050002270816	33.673	1.5219	33.978	33.575	35.097	0.30495					102	36	4	0	0	0	0.91005	1	2511	2511		42.474	0.078325	1	12694000	+		66019	29687	43843	43861	74966	74966					0.06503457233225163
WRGYSTRR	8	Unmodified	_WRGYSTRR_					0	0	0		nc|ENSG00000130518|Q9H0B3-5|IQCN;nc|ENSG00000130518|Q9H0B3|IQCN;ENSG00000130518|ENST00000392413|IQCN;nc|ENSG00000130518|Q9H0B3-3|IQCN;ENST00000599638.2_1_19:18367992-18369432:-|nuORF	nc|ENSG00000130518|Q9H0B3-5|IQCN	nc|ENSG00000130518|Q9H0B3-5|IQCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	541.2870483398438	2	541.286131	1080.55771	-0.40662	-0.0002201	-1.0308	-0.00055796	-1.4374	-0.00077805	541.2854856444462	21.769	1.1064	21.14	20.586	21.692	-0.62834					53	27	3	0	0	0	0.88944	1	844	844		57.811	8.3697	1	346250			66020	3650	43844	43862	74967	74967					0.02065332345978277
WRIFTPLLHQI	11	Unmodified	_WRIFTPLLHQI_					0	0	0		ENST00000490651.1_1_X:153760401-153761015:-|nuORF;ENSG00000160211|ENST00000393562|G6PD;nc|ENSG00000160211|P11413-3|G6PD;nc|ENSG00000160211|P11413-2|G6PD	ENST00000490651.1_1_X:153760401-153761015:-|nuORF	ENST00000490651.1_1_X:153760401-153761015:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	475.27789306640625	3	475.278473	1422.81359	-1.0084	-0.00047927	0.9785	0.00046506	-0.029888	-1.4205E-05	475.2788276348761	58.492	1.5243	59.046	58.555	60.079	0.55323					118	37	4	0	0	0	0.77205	1	6150	6150		17.167	0	1	2160600			66021	5566	43845	43863	74968	74968					0.11909595410565998
WRIYSYSYL	9	Unmodified	_WRIYSYSYL_					0	0	0		nc|ENSG00000143199|Q96PN6-4|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;ENSG00000143199|ENST00000367851|ADCY10;nc|ENSG00000143199|Q96PN6-3|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	625.8134765625	2	625.813856	1249.61316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.568	1	73.697	73.197	74.197	0.1292								0	0	0	0.28009	1	6764	6764		39.253	0.49923	1				66022	4611	43846	43864	74969	74969					-0.0016629897688744677
WRKEDCQRFYR	11	Unmodified	_WRKEDCQRFYR_					0	0	0		nc|ENSG00000172113|O75414-2|NME6;nc|ENSG00000172113|O75414-3|NME6;ENSG00000172113|ENST00000442597|NME6	nc|ENSG00000172113|O75414-2|NME6	nc|ENSG00000172113|O75414-2|NME6	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	529.8306884765625	3	529.593015	1585.75721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.73	1	71.73	71.23	72.23	0								0	0	0	0.56276	1	6409	6409		9.6461	3.3253	1				66023	6742	43847	43865	74970	74970					-0.012234004884248861
WRKRRWIEVY	10	Unmodified	_WRKRRWIEVY_					0	0	0		ENSG00000115548|ENST00000312912|KDM3A	ENSG00000115548|ENST00000312912|KDM3A	ENSG00000115548|ENST00000312912|KDM3A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	498.2868957519531	3	497.949239	1490.82589	0.10452	5.2046E-05	4.4055	0.0021937	4.51	0.0022458	497.95147269613915	23.548	0.51645	23.642	23.417	23.933	0.0945					32	22	2	0	0	0	0.89119	1	762	762		10.587	0.024911	1	97315			66024	2854	43848	43866	74971	74971					0.10010631873592502
WRKRRWIEVY	10	Unmodified	_WRKRRWIEVY_					0	0	0		ENSG00000115548|ENST00000312912|KDM3A	ENSG00000115548|ENST00000312912|KDM3A	ENSG00000115548|ENST00000312912|KDM3A	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	497.949239	1490.82589	0.66246	0.00032987	2.9526	0.0014702	3.615	0.0018001	497.9507737472848	23.766	0.47135	23.768	23.567	24.038	0.001894	0.062833	-0.00098885	NaN	10.587	38	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109560			66025	2854	43848	43866							0.10010631873592502
WRLIISLKIHR	11	Unmodified	_WRLIISLKIHR_					0	0	0		chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.3091125488281	3	478.973384	1433.89832	-1.6051	-0.0007688	3.9699	0.0019015	2.3648	0.0011327	478.9751768575692	49.706	2.3794	49.706	48.538	50.918	0					127	57	3	0	0	0	0.77205	1	3945	3945		17.167	3.0807	1	134370			66026	238	43849	43867	74972	74972					0.19872965947138255
WRLIISLKIHR	11	Unmodified	_WRLIISLKIHR_					0	0	0		chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97430419921875	3	478.973384	1433.89832	-0.59952	-0.00028715	3.054	0.0014628	2.4545	0.0011756	479.30919988874916	53.475	3.0495	53.45	51.564	54.614	-0.02475					117	77	2	0	0	0	0.81219	2	4662	4662;4842		8.7993	0.76496	1	217940			66027	238	43849	43867	74973;74974	74973					0.19872965947138255
WRLIISLKIHR	11	Unmodified	_WRLIISLKIHR_					0	0	0		chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9739685058594	3	478.973384	1433.89832	0.34157	0.0001636	2.1071	0.0010093	2.4487	0.0011729	478.9743151753571	51.804	1.1678	51.863	51.373	52.541	0.059719					70	37	2	0	0	0	0.81021	1	4133	4133		9.2118	2.8909	1	347520			66028	238	43849	43867	74975	74975					0.19872965947138255
WRLIISLKIHR	11	Unmodified	_WRLIISLKIHR_					0	0	0		chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9749450683594	3	478.973384	1433.89832	-0.315	-0.00015088	2.7524	0.0013183	2.4374	0.0011675	478.9746652956354	49.514	1.8124	49.42	48.44	50.252	-0.093178					109	43	3	0	0	0	0.79224	1	3773	3773		12.957	3.7457	1	294110			66029	238	43849	43867	74976	74976					0.19872965947138255
WRLIISLKIHR	11	Unmodified	_WRLIISLKIHR_					0	0	0		chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9752197265625	3	478.973384	1433.89832	-0.71901	-0.00034439	3.1467	0.0015072	2.4277	0.0011628	479.3092394614084	60.917	0.55768	60.925	60.553	61.11	0.0081177					45	21	3	0	0	0	0.81021	1	5275	5275		9.2118	3.2108	1	136290			66030	238	43849	43867	74977	74977					0.19872965947138255
WRLIISLKIHR	11	Unmodified	_WRLIISLKIHR_					0	0	0		chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	chr17:61776562-61780261|57|21.26|0.6|5.15|-|1|BRIP1,BRIP1|1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	478.9744873046875	3	478.973384	1433.89832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.076	1	54.014	53.514	54.514	-0.062065								0	0	0	0.56276	1	4458	4458		12.957	7.2587	1				66031	238	43849	43867	74978	74978					0.19872965947138255
WRLKISNLKK	10	Unmodified	_WRLKISNLKK_					0	0	0		ENST00000527306.1_1_8:42752256-42852891:+|nuORF;ENSG00000168172|ENST00000307602|HOOK3	ENST00000527306.1_1_8:42752256-42852891:+|nuORF	ENST00000527306.1_1_8:42752256-42852891:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	643.40576171875	2	643.408789	1284.80303	-1.1464	-0.0007376	-3.4117	-0.0021951	-4.5581	-0.0029327	643.406459620359	105.63	1.1927	105.7	104.97	106.16	0.073112					153	29	6	0	0	0	0.80179	1	11236	11236		39.253	2.8061	1	22367000			66032	6381	43850	43868	74979	74979					0.1720161275609371
WRLRALRRKNF	11	Unmodified	_WRLRALRRKNF_					0	0	0		nc|ENSG00000132004|Q5XUX1-2|FBXW9	nc|ENSG00000132004|Q5XUX1-2|FBXW9	nc|ENSG00000132004|Q5XUX1-2|FBXW9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	505.9738464355469	3	505.975899	1514.90587	-1.5955	-0.0008073	-1.291	-0.00065324	-2.8866	-0.0014605	505.97515847416315	112.45	0.70615	112.42	112.28	112.99	-0.032333					43	19	3	0	0	0	0.81021	1	12008	12008		9.2118	4.5685	1	448640			66033	14919	43851	43869	74980	74980					0.16901118267423954
WRLWRRLQKTS	11	Unmodified	_WRLWRRLQKTS_					0	0	0		ENST00000411552.5_1_7:30498788-30515497:-|nuORF;ENST00000419799.5_1_7:30498788-30503297:-|nuORF	ENST00000411552.5_1_7:30498788-30515497:-|nuORF	ENST00000411552.5_1_7:30498788-30515497:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.6340026855469	3	510.631909	1528.8739	1.9809	0.0010115	3.5247	0.0017998	5.5056	0.0028114	510.63303476762127	104.3	2.045	104.49	103.76	105.81	0.18887					109	51	3	0	0	0	0.82431	1	12673	12673		7.6794	1.9806	1	329880			66034	11327	43852	43870	74981	74981					0.1306170579364334
WRMYVVRRRYK	11	Unmodified	_WRMYVVRRRYK_					0	0	0		nc|ENSG00000197535|Q9Y4I1-2|MYO5A;nc|ENSG00000197535|Q9Y4I1|MYO5A;ENSG00000197535|ENST00000399233|MYO5A	nc|ENSG00000197535|Q9Y4I1-2|MYO5A	nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.3053588867188	3	538.305028	1611.89325	3.5626	0.0019178	-2.5852	-0.0013916	0.97735	0.00052611	538.3036154864011	110.09	1.3352	110.06	109.77	111.11	-0.027641					122	44	4	0	0	0	0.85439	1	12275	12275		5.6988	2.2901	1	461650			66035	8173	43853	43871	74982	74982					0.11178338812896982
WRMYVVRRRYK	11	Unmodified	_WRMYVVRRRYK_					0	0	0		nc|ENSG00000197535|Q9Y4I1-2|MYO5A;nc|ENSG00000197535|Q9Y4I1|MYO5A;ENSG00000197535|ENST00000399233|MYO5A	nc|ENSG00000197535|Q9Y4I1-2|MYO5A	nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.2933349609375	3	538.305028	1611.89325	0.4593	0.00024725	-0.28941	-0.00015579	0.16989	9.1453E-05	538.6393306694632	22.303	0.27554	21.885	21.695	21.97	-0.41879					6	5	2	0	0	0	0.18386	1	882	882		5.6988	4.28	1	29400			66036	8173	43853	43871	74983	74983					0.11178338812896982
WRMYVVRRRYK	11	Unmodified	_WRMYVVRRRYK_					0	0	0		nc|ENSG00000197535|Q9Y4I1-2|MYO5A;nc|ENSG00000197535|Q9Y4I1|MYO5A;ENSG00000197535|ENST00000399233|MYO5A	nc|ENSG00000197535|Q9Y4I1-2|MYO5A	nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	538.305028	1611.89325	-0.30468	-0.00016401	0.18532	9.9757E-05	-0.11937	-6.4256E-05	538.6396201723244	22.4	0.23165	21.789	21.633	21.865	-0.6107	-0.047774	0.00054841	NaN	9.2118	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34357			66037	8173	43853	43871							0.11178338812896982
WRNRQKNKRR	10	Unmodified	_WRNRQKNKRR_					0	0	0		ENSG00000132275|ENST00000254605|RRP8	ENSG00000132275|ENST00000254605|RRP8	ENSG00000132275|ENST00000254605|RRP8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	481.28350830078125	3	481.283503	1440.82868	-0.83529	-0.00040201	0.22807	0.00010977	-0.60723	-0.00029225	481.2835872163677	101.92	1.5231	101.92	100.91	102.43	0					93	37	3	0	0	0	0.86931	1	10361	10361		14.086	0	1	462650			66038	3775	43854	43872	74984	74984					0.12589900051079894
WRNRQKNKRR	10	Unmodified	_WRNRQKNKRR_					0	0	0		ENSG00000132275|ENST00000254605|RRP8	ENSG00000132275|ENST00000254605|RRP8	ENSG00000132275|ENST00000254605|RRP8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	481.2822570800781	3	481.283503	1440.82868	-0.094123	-4.53E-05	-0.76388	-0.00036764	-0.858	-0.00041294	481.28309921299575	101.72	1.6724	101.74	100.69	102.36	0.01989					105	39	3	0	0	0	0.85441	1	10890	10890		20.837	2.3061	1	543600			66039	3775	43854	43872	74985	74985					0.12589900051079894
WRNRQKNKRR	10	Unmodified	_WRNRQKNKRR_					0	0	0		ENSG00000132275|ENST00000254605|RRP8	ENSG00000132275|ENST00000254605|RRP8	ENSG00000132275|ENST00000254605|RRP8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2830810546875	3	481.283503	1440.82868	-0.57529	-0.00027688	-0.2922	-0.00014063	-0.86749	-0.00041751	481.28331893775436	101.47	1.933	101.51	100.25	102.18	0.044815					108	45	4	0	0	0	0.86551	1	10951	10951		14.694	3.2391	1	479720			66040	3775	43854	43872	74986	74986					0.12589900051079894
WRNRQKNKRR	10	Unmodified	_WRNRQKNKRR_					0	0	0		ENSG00000132275|ENST00000254605|RRP8	ENSG00000132275|ENST00000254605|RRP8	ENSG00000132275|ENST00000254605|RRP8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	481.28448486328125	3	481.283503	1440.82868	-0.7743	-0.00037266	0.59176	0.0002848	-0.18255	-8.7856E-05	481.2837549542837	102.74	2.1503	102.93	102.14	104.29	0.19484					128	53	4	0	0	0	0.86151	1	10840	10840		15.333	1.2471	1	1226400			66041	3775	43854	43872	74987	74987					0.12589900051079894
WRNRQKNKRR	10	Unmodified	_WRNRQKNKRR_					0	0	0		ENSG00000132275|ENST00000254605|RRP8	ENSG00000132275|ENST00000254605|RRP8	ENSG00000132275|ENST00000254605|RRP8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.2831726074219	3	481.283503	1440.82868	-1.6759	-0.0008066	1.7848	0.000859	0.10888	5.2401E-05	481.2841599941505	102.78	1.5282	102.92	102.18	103.71	0.13569					101	38	5	0	0	0	0.86802	1	10762	10762		27.047	0.29761	1	918230			66042	3775	43854	43872	74988	74988					0.12589900051079894
WRPAQSAAQF	10	Unmodified	_WRPAQSAAQF_					0	0	0			REV__ENST00000532584.5_1_15:89865199-89866659:-|nuORF	REV__ENST00000532584.5_1_15:89865199-89866659:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.2913818359375	2	581.293622	1160.57269	0.66003	0.00038367	-0.53669	-0.00031198	0.12333	7.1693E-05	581.2920313686129	36.705	0.74496	37.191	36.874	37.619	0.48581					58	17	5	0	0	0	0.76096	1	2920	2920		41.427	6.2259	1	679340	+		66043	28329	43855	43873	74989	74989					-0.0011722057668066554
WRPAQSAAQF	10	Unmodified	_WRPAQSAAQF_					0	0	0			REV__ENST00000532584.5_1_15:89865199-89866659:-|nuORF	REV__ENST00000532584.5_1_15:89865199-89866659:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	581.293622	1160.57269	-0.5716	-0.00033227	0.63436	0.00036875	0.062755	3.6479E-05	581.2926594990687	36.852	0.7402	37.134	36.724	37.464	0.28173	-0.028585	0.00068226	NaN	41.427	52	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	489060	+		66044	28329	43855	43873							-0.0011722057668066554
WRPAQSAAQF	10	Unmodified	_WRPAQSAAQF_					0	0	0			REV__ENST00000532584.5_1_15:89865199-89866659:-|nuORF	REV__ENST00000532584.5_1_15:89865199-89866659:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	581.293622	1160.57269	0.66003	0.00038367	-0.53669	-0.00031198	0.12333	7.1693E-05	581.2920313686129	36.705	0.74496	37.191	36.874	37.619	0.48581	0.028585	-0.00067919	NaN	41.427	58	17	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	679340	+		66045	28329	43855	43873							-0.0011722057668066554
WRQKREQSPSQ	11	Unmodified	_WRQKREQSPSQ_					0	0	0		ENST00000483991.5_1_9:138703157-138717996:-|nuORF;nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;ENSG00000130559|ENST00000389532|CAMSAP1;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1	ENST00000483991.5_1_9:138703157-138717996:-|nuORF	ENST00000483991.5_1_9:138703157-138717996:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	477.919189453125	3	477.248013	1428.72221	-0.2411	-0.00011506	-4.3599	-0.0020808	-4.601	-0.0021958	477.2443203923821	30.606	0.4887	30.559	30.422	30.911	-0.047064					14	12	2	0	0	0	0.17996	1	1688	1688		22.562	19.35	1	28466			66046	3656	43856	43874	74990	74990					0.024996799752670995
WRRAWPRRRRR	11	Unmodified	_WRRAWPRRRRR_					0	0	0		nc|ENSG00000117791|Q969Z3-2|MTARC2;ENSG00000117791|ENST00000366913|MTARC2	nc|ENSG00000117791|Q969Z3-2|MTARC2	nc|ENSG00000117791|Q969Z3-2|MTARC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.6015625	3	551.329558	1650.96685	1.8266	0.0010071	0.028563	1.5748E-05	1.8552	0.0010228	551.3302231512048	26.802	0.18111	26.461	26.323	26.504	-0.34035					5	3	2	0	0	0	0.18391	1	1498	1498		2.8518	1.4331	1	42831			66047	3002	43857	43875	74991	74991					0.16740068090189197
WRRIQEERMKF	11	Unmodified	_WRRIQEERMKF_					0	0	0			REV__ENSG00000104611|ENST00000265807|SH2D4A	REV__ENSG00000104611|ENST00000265807|SH2D4A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.2857666015625	3	526.94891	1577.8249	1.2835	0.00067634	-0.017622	-9.2859E-06	1.2659	0.00066705	526.9490181136337	21.061	0.66212	20.602	20.237	20.9	-0.4591					43	15	4	0	0	0	0.80813	1	742	742		9.6461	3.3253	1	115630	+		66048	17463	43858	43876	74992	74992					0.059100494423319105
WRRKLKPGI	9	Unmodified	_WRRKLKPGI_					0	0	0			REV__ENSG00000143653|ENST00000366510|SCCPDH	REV__ENSG00000143653|ENST00000366510|SCCPDH	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	577.3677368164062	2	577.369467	1152.72438	-1.363	-0.00078696	-3.8731	-0.0022362	-5.2361	-0.0030231	577.3671096125403	102.15	3.2706	102.28	101.89	105.16	0.13569					238	81	5	0	0	0	0.77546	1	10827	10827		31.955	0.42505	1	14386000	+		66049	19831	43859	43877	74993	74993					0.1541280524170361
WRRLFKKIWIF	11	Unmodified	_WRRLFKKIWIF_					0	0	0		ENST00000541657.5_3_12:122240596-122240792:-|nuORF;ENST00000541694.5_1_12:122240596-122240713:-|nuORF;ENST00000536662.5_1_12:122240596-122240785:-|nuORF	ENST00000541657.5_3_12:122240596-122240792:-|nuORF	ENST00000541657.5_3_12:122240596-122240792:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.3312377929688	3	531.657396	1591.95036	2.2905	0.0012178	-3.1286	-0.0016633	-0.83802	-0.00044554	531.9900345696294	105.92	0.5352	106.05	105.7	106.24	0.12742					20	16	2	0	0	0	0.18404	1	12913	12913		0.37141	0	1	59382			66050	13439	43860	43878	74994	74994					0.17806129360906198
WRRMWRRRGPR	11	Unmodified	_WRRMWRRRGPR_					0	0	0			REV__ENST00000296861.2_1_6:47277174-47277357:-|nuORF	REV__ENST00000296861.2_1_6:47277174-47277357:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	538.6392822265625	3	538.304133	1611.89057	-0.51611	-0.00027783	3.3324	0.0017938	2.8162	0.001516	538.6402087951344	109.81	1.5286	109.81	109.6	111.13	0					119	56	3	0	0	0	0.80593	3	11515	11444;11468;11515		10.104	0.45776	1	318350	+		66051	24721	43861	43879	74995;74996;74997	74997					0.10909928198589114
WRRMWRRRGPR	11	Unmodified	_WRRMWRRRGPR_					0	0	0			REV__ENST00000296861.2_1_6:47277174-47277357:-|nuORF	REV__ENST00000296861.2_1_6:47277174-47277357:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3047485351562	3	538.304133	1611.89057	1.2455	0.00067047	1.2392	0.00066704	2.4847	0.0013375	538.3047341501328	109.96	1.3308	109.99	109.73	111.06	0.033096					84	48	2	0	0	0	0.88916	1	12099	12099		3.4087	1.99	1	535530	+		66052	24721	43861	43879	74998	74998					0.10909928198589114
WRRMWRRRGPR	11	Unmodified	_WRRMWRRRGPR_					0	0	0			REV__ENST00000296861.2_1_6:47277174-47277357:-|nuORF	REV__ENST00000296861.2_1_6:47277174-47277357:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.63916015625	3	538.304133	1611.89057	0.84006	0.00045221	1.5362	0.00082697	2.3763	0.0012792	538.3048488813716	110.52	0.8345	110.6	110.08	110.92	0.073685					49	23	3	0	0	0	0.88916	1	11864	11864		3.4087	0	1	329000	+		66053	24721	43861	43879	74999	74999					0.10909928198589114
WRRMWRRRGPR	11	Unmodified	_WRRMWRRRGPR_					0	0	0			REV__ENST00000296861.2_1_6:47277174-47277357:-|nuORF	REV__ENST00000296861.2_1_6:47277174-47277357:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3050537109375	3	538.304133	1611.89057	-1.4902	-0.00080218	4.0096	0.0021584	2.5194	0.0013562	538.3061488564512	110.54	0.85041	110.54	110.07	110.92	-0.0074387					67	26	4	0	0	0	0.84494	1	11794	11794		6.3209	0.31984	1	283890	+		66054	24721	43861	43879	75000	75000					0.10909928198589114
WRRMWRRRGPR	11	Unmodified	_WRRMWRRRGPR_					0	0	0			REV__ENST00000296861.2_1_6:47277174-47277357:-|nuORF	REV__ENST00000296861.2_1_6:47277174-47277357:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3045654296875	3	538.304133	1611.89057	5.1632	0.0027793	-2.5487	-0.001372	2.6145	0.0014074	538.3026802325604	110.18	0.55859	110.25	110.05	110.61	0.067993					28	18	2	0	0	0	0.84494	1	13411	13411		6.3209	0.6221	1	463850	+		66055	24721	43861	43879	75001	75001					0.10909928198589114
WRRRQRWRRR	10	Unmodified	_WRRRQRWRRR_					0	0	0		ENST00000372724.5_1_10:76586363-76598485:+|nuORF	ENST00000372724.5_1_10:76586363-76598485:+|nuORF	ENST00000372724.5_1_10:76586363-76598485:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.4539794921875	3	537.985792	1610.93555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.731	1	66.117	65.617	66.617	0.38581								0	0	0	0.45132	1	7147	7147		4.6126	0	1				66056	10715	43862	43880	75002	75002					0.15451495056117892
WRRRRKVGDRG	11	Unmodified	_WRRRRKVGDRG_					0	0	0			REV__ENST00000181839.8_1_7:39989715-39990237:+|nuORF	REV__ENST00000181839.8_1_7:39989715-39990237:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.28302001953125	3	481.283503	1440.82868	-1.6759	-0.0008066	1.7848	0.000859	0.10888	5.2401E-05	481.2841599941505	102.78	1.5282	102.92	102.18	103.71	0.13569					101	38	5	0	0	0	0.76384	1	10751	10751		18.966	1.7996	1	918230	+		66057	24087	43863	43881	75003	75003					0.12589900051079894
WRRRRTQRRCW	11	Unmodified	_WRRRRTQRRCW_					0	0	0		ENST00000447310.5_1_19:58067715-58071064:-|nuORF	ENST00000447310.5_1_19:58067715-58071064:-|nuORF	ENST00000447310.5_1_19:58067715-58071064:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	415.2845764160156	4	415.730101	1658.8913	1.6461	0.00068433	-3.978	-0.0016538	-2.3319	-0.00096944	415.7283629809205	24.151	1.4437	23.637	23.28	24.724	-0.51365					85	32	5	0	0	0	0.1838	1	1237	1237		6.001	4.5823	1	347820			66058	11848	43864	43882	75004	75004					0.08820722847644902
WRRRVQQQYRR	11	Unmodified	_WRRRVQQQYRR_					0	0	0			REV__ENSG00000173237|ENST00000683896|C11orf86	REV__ENSG00000173237|ENST00000683896|C11orf86	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.3323974609375	3	544.641579	1630.90291	3.1571	0.0017195	2.3521	0.0012811	5.5092	0.0030005	544.6427542360926	98.85	1.0044	98.795	98.033	99.037	-0.054825					29	22	2	0	0	0	0.18258	1	10608	10608		5.4129	0	1	78531	+		66059	21905	43865	43883	75005	75005					0.11269243142623964
WRRWNRFNRRR	11	Unmodified	_WRRWNRFNRRR_					0	0	0		nc|ENSG00000157388|Q01668-3|CACNA1D;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000157388|Q01668-2|CACNA1D;nc|ENSG00000157388|Q01668-4|CACNA1D	nc|ENSG00000157388|Q01668-3|CACNA1D	nc|ENSG00000157388|Q01668-3|CACNA1D	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	567.3306274414062	3	568.317318	1701.93013	-1.3926	-0.00079141	4.3654	0.002481	2.9729	0.0016895	568.6548942579788	90.97	0.19764	91.15	90.999	91.196	0.18028					6	4	2	0	0	0	0.18425	1	9083	9083		0	0	1	105540			66060	5426	43866	43884	75006	75006					0.10723771473658417
WRRWRKRRITR	11	Unmodified	_WRRWRKRRITR_					0	0	0			REV__ENST00000399933.7_1_9:6007594-6007651:-|nuORF	REV__ENST00000399933.7_1_9:6007594-6007651:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.2893981933594	4	418.257917	1669.00256	2.2435	0.00093837	3.2264	0.0013495	5.4699	0.0022878	418.25955307074463	74.79	0.16737	74.835	74.772	74.939	0.04509					6	4	2	0	0	0	0.18413	1	7261	7261		3.026	1.8777	1	21623	+		66061	26241	43867	43885	75007	75007					0.1948210554724028
WRRWRKRWRR	10	Unmodified	_WRRWRKRWRR_					0	0	0			REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.7557983398438	3	547.990654	1640.95013	2.1012	0.0011514	-0.66853	-0.00036635	1.4327	0.00078509	547.9901840126272	26.487	0.92894	26.146	25.53	26.458	-0.34035					35	20	3	0	0	0	0.37624	1	1450	1450		4.0829	2.3266	1	148800	+		66062	24388	43868	43886	75008	75008					0.15529567204271189
WRRWRKRWRR	10	Unmodified	_WRRWRKRWRR_					0	0	0			REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		3	547.990654	1640.95013	0.074533	4.0843E-05	1.4647	0.00080266	1.5393	0.0008435	548.3257471060723	26.255	0.34679	26.322	26.155	26.502	0.066875	0.071846	0.0014007	NaN	4.0829	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109070	+		66063	24388	43868	43886							0.15529567204271189
WRRWRKRWRR	10	Unmodified	_WRRWRKRWRR_					0	0	0			REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	547.990654	1640.95013	0.17715	9.7077E-05	1.2374	0.00067806	1.4145	0.00077514	547.9913210661504	26.177	0.36716	26.282	26.107	26.474	0.1054	0.031923	0.001027	NaN	4.0829	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188740	+		66064	24388	43868	43886							0.15529567204271189
WRSVLLHIIM	10	Unmodified	_WRSVLLHIIM_					0	0	0		nc|ENSG00000205423|Q8N9A8-3|CNEP1R1	nc|ENSG00000205423|Q8N9A8-3|CNEP1R1	nc|ENSG00000205423|Q8N9A8-3|CNEP1R1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3770141601562	2	634.370818	1266.72708	6.8448	0.0043422	2.6623	0.0016889	9.5072	0.0060311	634.3725377460627	112.61	0.83469	112.63	112.35	113.18	0.016953					37	29	2	0	0	0	0.85466	1	13646	13646		20.947	0	1	45562			66065	15218	43869	43887	75009	75009					0.10438892584329551
WRTEDFRMFKN	11	Unmodified	_WRTEDFRMFKN_					0	0	0		nc|ENSG00000163714|O15042-3|U2SURP;nc|ENSG00000163714|O15042-2|U2SURP;ENSG00000163714|ENST00000473835|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	510.57940673828125	3	510.582116	1528.72452	-1.5972	-0.0008155	0.57621	0.0002942	-1.021	-0.00052129	510.9168544351292	40.615	0.43793	40.622	40.274	40.712	0.0065727					17	10	2	0	0	0	0.76892	1	2933	2933		17.833	1.3033	1	212880			66066	15051	43870	43888	75010	75010					-0.01869607611297397
WRTWTSFFLRW	11	Unmodified	_WRTWTSFFLRW_					0	0	0		ENST00000566181.2_1_16:731229-732210:+|nuORF	ENST00000566181.2_1_16:731229-732210:+|nuORF	ENST00000566181.2_1_16:731229-732210:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.6073608398438	3	529.273611	1584.799	-0.03642	-1.9276E-05	-1.0763	-0.00056967	-1.1127	-0.00058895	529.6073842966563	75.93	0.75759	75.979	75.606	76.364	0.049194					66	21	4	0	0	0	0.84494	1	7324	7324		6.3209	0	1	322850			66067	13931	43871	43889	75011	75011					0.029995232623832635
WRVFTVCWVHV	11	Unmodified	_WRVFTVCWVHV_					0	0	0		ENST00000315366.7_1_4:114899993-114900134:-|nuORF	ENST00000315366.7_1_4:114899993-114900134:-|nuORF	ENST00000315366.7_1_4:114899993-114900134:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.23974609375	3	477.916658	1430.72815	0.7292	0.0003485	0.83973	0.00040132	1.5689	0.00074982	477.9169152688257	53.517	0.82674	53.931	53.457	54.284	0.4139					46	19	3	0	0	0	0.17729	1	5449	5449		23.378	4.8469	1	379330			66068	9974	43872	43890	75012	75012					0.03001106953206545
WRVNVPLNKK	10	Unmodified	_WRVNVPLNKK_					0	0	0			REV__ENST00000509678.1_1_4:54915115-54930467:-|nuORF	REV__ENST00000509678.1_1_4:54915115-54930467:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3843383789062	2	627.377489	1252.74043	6.5804	0.0041284	1.5093	0.00094687	8.0897	0.0050753	627.3785016354675	112.85	0.36639	112.87	112.77	113.14	0.01696					21	13	2	0	0	0	0.85466	1	13679	13679		20.947	4.2295	1	54970	+		66069	17752	43873	43891	75013	75013					0.12416466687909633
WRVNVPLNKK	10	Unmodified	_WRVNVPLNKK_					0	0	0			REV__ENST00000509678.1_1_4:54915115-54930467:-|nuORF	REV__ENST00000509678.1_1_4:54915115-54930467:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3863525390625	2	627.377489	1252.74043	6.5832	0.0041301	1.563	0.00098061	8.1462	0.0051107	627.3783950453069	114.13	1.8991	114.14	113.45	115.35	0.0012054					123	82	2	0	0	0	0.86718	1	13723	13723		27.882	7.8855	1	94412	+		66070	17752	43873	43891	75014	75014					0.12416466687909633
WRVVTDKDKL	10	Unmodified	_WRVVTDKDKL_					0	0	0			REV__nc|ENSG00000141556|Q9BTW9-5|TBCD	REV__nc|ENSG00000141556|Q9BTW9-5|TBCD	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.5752258300781	3	420.575067	1258.70337	-1.7821	-0.00074949	2.4202	0.0010179	0.6381	0.00026837	420.5759554237421	46.857	0.86356	46.857	46.491	47.355	0					56	24	4	0	0	0	0.86207	1	3576	3576		24.232	1.6702	1	693050	+		66071	19695	43874	43892	75015	75015					0.08436750351506817
WRWRRWRKRWR	11	Unmodified	_WRWRRWRKRWR_					0	0	0			REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	458.2786865234375	4	457.764638	1827.02945	-1.4212	-0.00065058	1.3257	0.00060685	-0.095538	-4.3734E-05	457.7652183856283	48.544	0.84303	49.013	48.546	49.389	0.46941					62	20	4	0	0	0	0.1841	1	4641	4641		3.2113	3.2113	1	850630	+		66072	24388	43875	43893	75016	75016					0.149012141583853
WRWRRWRKRWR	11	Unmodified	_WRWRRWRKRWR_					0	0	0			REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	REV__ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	458.27923583984375	4	457.764638	1827.02945	-0.29506	-0.00013507	0.43566	0.00019943	0.1406	6.4362E-05	458.0155650085843	48.321	0.80256	49.225	48.765	49.568	0.90424					62	19	4	0	0	0	0.18386	1	4618	4618		3.026	3.026	1	996680	+		66073	24388	43875	43893	75017	75017					0.149012141583853
WRWRWSRMLRR	11	Unmodified	_WRWRWSRMLRR_					0	0	0			REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	564.31591796875	3	563.644155	1687.91064	-1.2567	-0.00070834	4.342	0.0024474	3.0853	0.001739	563.6465880597	56.103	0.52467	56.093	55.684	56.208	-0.010132					27	15	2	0	0	0	0.88916	1	5030	5030		3.4087	2.1768	1	153160	+		66074	26405	43876	43894	75018	75018					0.09419679138545689
WRWRWSRMLRR	11	Unmodified	_WRWRWSRMLRR_					0	0	0			REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	564.3179931640625	3	563.644155	1687.91064	-1.2567	-0.00070834	4.342	0.0024474	3.0853	0.001739	563.6465880597	56.103	0.52467	56.093	55.684	56.208	-0.010132					27	15	2	0	0	0	0.18353	1	5000	5000		5.1424	1.7337	1	153160	+		66075	26405	43876	43894	75019	75019					0.09419679138545689
WRWRWSRMLRR	11	Unmodified	_WRWRWSRMLRR_					0	0	0			REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.22802734375	4	422.984935	1687.91064	-0.42941	-0.00018164	2.0113	0.00085073	1.5818	0.0006691	423.2355011540366	56.041	0.51494	56.013	55.626	56.141	-0.027279					33	15	4	0	0	0	0.18408	1	5142	5142		3.4087	0	1	175210	+		66076	26405	43876	43894	75020	75020					0.09419679138545689
WRWRWSRMLRR	11	Unmodified	_WRWRWSRMLRR_					0	0	0			REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.6466064453125	3	563.644155	1687.91064	0.13943	7.8587E-05	2.6013	0.0014662	2.7407	0.0015448	563.6456218135155	55.99	0.48829	56.021	55.689	56.177	0.030838					27	12	3	0	0	0	0.92221	1	5061	5061		1.2319	0.89143	1	152890	+		66077	26405	43876	43894	75021	75021					0.09419679138545689
WRWRWSRMLRR	11	Unmodified	_WRWRWSRMLRR_					0	0	0			REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	REV__ENST00000414613.1_1_2:61164392-61164575:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.228271484375	4	422.984935	1687.91064	1.6462	0.00069632	0.87974	0.00037212	2.526	0.0010684	423.2357120075318	56.02	0.46109	56.05	55.689	56.15	0.030838					22	11	3	0	0	0	0.18408	1	5063	5063		3.4087	1.99	1	158020	+		66078	26405	43876	43894	75022	75022					0.09419679138545689
WRWRYWPPE	9	Unmodified	_WRWRYWPPE_					0	0	0		ENST00000380009.8_1_5:94890875-94891094:+|nuORF	ENST00000380009.8_1_5:94890875-94891094:+|nuORF	ENST00000380009.8_1_5:94890875-94891094:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	459.7752380371094	3	459.228001	1374.66217	0.17574	8.0706E-05	-1.9287	-0.00088571	-1.753	-0.00080501	459.56113998320546	20.773	0.40775	20.314	20.053	20.461	-0.4591					15	9	2	0	0	0	0.20789	1	678	678		8.2351	0	1	22885			66079	10910	43877	43895	75023	75023					-0.010169658973154583
WRWWRRPNWPR	11	Unmodified	_WRWWRRPNWPR_					0	0	0			REV__ENST00000564348.5_1_19:7982609-7983760:+|nuORF	REV__ENST00000564348.5_1_19:7982609-7983760:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	565.9683227539062	3	565.967515	1694.88072	-0.46327	-0.00026219	3.0335	0.0017169	2.5702	0.0014547	565.9692580432492	24.181	0.83909	24.236	23.869	24.708	0.055487					47	20	3	0	0	0	0.89215	2	869	856;869		3.2113	0	1	101800	+		66080	28835	43878	43896	75024;75025	75025					0.061070634648785926
WRWWRRPNWPR	11	Unmodified	_WRWWRRPNWPR_					0	0	0			REV__ENST00000564348.5_1_19:7982609-7983760:+|nuORF	REV__ENST00000564348.5_1_19:7982609-7983760:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	565.9713745117188	3	565.967515	1694.88072	-0.11572	-6.5492E-05	2.4867	0.0014074	2.371	0.0013419	565.9689648822617	24.425	1.0773	24.379	24.029	25.107	-0.04598					64	23	4	0	0	0	0.8498	5	920	920;937;948;959;971		6.001	3.0373	1	97670	+		66081	28835	43878	43896	75026;75027;75028;75029;75030	75026					0.061070634648785926
WRWWRRPNWPR	11	Unmodified	_WRWWRRPNWPR_					0	0	0			REV__ENST00000564348.5_1_19:7982609-7983760:+|nuORF	REV__ENST00000564348.5_1_19:7982609-7983760:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	566.30419921875	3	565.967515	1694.88072	-0.11572	-6.5492E-05	2.4867	0.0014074	2.371	0.0013419	565.9689648822617	24.425	1.0773	24.379	24.029	25.107	-0.04598					64	23	4	0	0	0	0.18408	1	948	948		3.4087	3.0373	1	97670	+		66082	28835	43878	43896	75031	75031					0.061070634648785926
WRWWRRPNWPR	11	Unmodified	_WRWWRRPNWPR_					0	0	0			REV__ENST00000564348.5_1_19:7982609-7983760:+|nuORF	REV__ENST00000564348.5_1_19:7982609-7983760:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	566.3040161132812	3	565.967515	1694.88072	1.1175	0.00063245	1.4149	0.00080078	2.5323	0.0014332	565.968273554953	24.406	0.80824	24.362	24.024	24.832	-0.043222					47	17	3	0	0	0	0.91937	4	889	867;878;889;912		1.4188	1.4188	1	110370	+		66083	28835	43878	43896	75032;75033;75034;75035	75034					0.061070634648785926
WRYKMANL	8	Unmodified	_WRYKMANL_					0	0	0		chr4:98891332-98893166|25|22.28|0.36|5.96|-|2|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|4	chr4:98891332-98893166|25|22.28|0.36|5.96|-|2|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|4	chr4:98891332-98893166|25|22.28|0.36|5.96|-|2|TE_info:Tigger1,Tigger1_dup3293,TcMar-Tigger,DNA,donor,-,98893166,98895324|EIF4E,None|4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.2964477539062	2	541.284211	1080.55387	0.28155	0.0001524	1.9088	0.0010332	2.1904	0.0011856	541.2850882224766	21.553	0.80586	21.11	20.734	21.54	-0.44324					49	18	3	0	0	0	0.88915	1	826	826		35.201	6.0512	1	332750			66084	438	43879	43897	75036	75036					0.016815265279092273
WRYWWHYPICQ	11	Unmodified	_WRYWWHYPICQ_					0	0	0		ENST00000410111.7_1_2:86406577-86422494:-|nuORF	ENST00000410111.7_1_2:86406577-86422494:-|nuORF	ENST00000410111.7_1_2:86406577-86422494:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.5851440429688	3	546.587201	1636.73977	0.42826	0.00023408	-3.8618	-0.0021108	-3.4336	-0.0018767	546.5849923030949	23.523	1.1712	23.47	23.232	24.403	-0.052114					49	31	2	0	0	0	0.81021	1	852	852		9.2118	2.5522	1	52021			66085	11324	43880	43898	75037	75037					-0.05312696023429453
WSAALHTVLSA	11	Unmodified	_WSAALHTVLSA_					0	0	0			REV__ENST00000561028.5_1_14:24583936-24584080:-|nuORF	REV__ENST00000561028.5_1_14:24583936-24584080:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3104858398438	2	578.31148	1154.60841	-0.30541	-0.00017662	-1.2607	-0.00072908	-1.5661	-0.0009057	578.3105993918314	110.37	1.6265	110.37	110.02	111.65	0					155	51	5	0	0	0	0.58425	1	11470	11470		45.972	0	1	2787700	+		66086	28773	43881	43899	75038	75038					0.037288168803115695
WSAFLCLILVA	11	Unmodified	_WSAFLCLILVA_					0	0	0		nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;ENSG00000080493|ENST00000264485|SLC4A4;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4;nc|ENSG00000080493|Q9Y6R1-4|SLC4A4;nc|ENSG00000080493|Q9Y6R1-3|SLC4A4	nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	618.3460693359375	2	618.346477	1234.6784	1.2492	0.00077242	-2.2744	-0.0014064	-1.0252	-0.00063393	618.344978551102	97.744	3.3917	97.971	96.779	100.17	0.22787					230	79	4	0	0	0	0.67493	1	10058	10058		35.618	7.5368	1	960930			66087	1441	43882	43900	75039	75039					0.07044979224565395
WSAFPPNG	8	Unmodified	_WSAFPPNG_					0	0	0			REV__ENST00000398101.7_1_3:127441369-127454597:-|nuORF	REV__ENST00000398101.7_1_3:127441369-127454597:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	438.2633972167969	2	438.205953	874.397353	1.6436	0.00072023	-3.9095	-0.0017132	-2.2659	-0.00099292	438.2036557687406	35.601	0.34103	35.982	35.749	36.09	0.3812					10	8	2	0	0	0	0.4196	1	2749	2749		57.811	13.694	1	119460	+		66088	26193	43883	43901	75040	75040					-0.044870153709098304
WSATAQFH	8	Unmodified	_WSATAQFH_					0	0	0			REV__ENST00000486484.5_1_2:9002434-9143743:-|nuORF	REV__ENST00000486484.5_1_2:9002434-9143743:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	474.2230529785156	2	474.222134	946.429715	-0.14784	-7.0109E-05	2.3368	0.0011082	2.189	0.0010381	474.22313992433055	82.527	0.70206	82.958	82.672	83.374	0.43108					26	16	2	0	0	0	0.90465	1	9551	9551		40.573	1.3198	1	460670	+		66089	19841	43884	43902	75041	75041					-0.045642279679100284
WSATAQFH	8	Unmodified	_WSATAQFH_					0	0	0			REV__ENST00000486484.5_1_2:9002434-9143743:-|nuORF	REV__ENST00000486484.5_1_2:9002434-9143743:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	474.222134	946.429715	-0.14784	-7.0109E-05	2.3368	0.0011082	2.189	0.0010381	474.22313992433055	82.527	0.70206	82.958	82.672	83.374	0.43108	0.0043136	-8.3288E-06	NaN	40.573	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	460670	+		66090	19841	43884	43902							-0.045642279679100284
WSATAQFH	8	Unmodified	_WSATAQFH_					0	0	0			REV__ENST00000486484.5_1_2:9002434-9143743:-|nuORF	REV__ENST00000486484.5_1_2:9002434-9143743:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	474.222134	946.429715	-0.80897	-0.00038363	2.3861	0.0011315	1.5771	0.0007479	474.22350567321286	82.476	0.70396	82.95	82.631	83.335	0.47383	-0.0043136	3.8423E-05	NaN	40.573	44	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	558990	+		66091	19841	43884	43902							-0.045642279679100284
WSEWSDPVIF	10	Unmodified	_WSEWSDPVIF_					0	0	0		ENSG00000103522|ENST00000337929|IL21R;ENST00000564583.1_1_16:27455877-27457360:+|nuORF	ENSG00000103522|ENST00000337929|IL21R	ENSG00000103522|ENST00000337929|IL21R	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	633.3007202148438	2	633.295496	1264.57644	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.856	1	64.98	64.48	65.48	0.12397								0	0	0	0.45132	1	5745	5745		42.396	10.866	1				66092	2088	43885	43903	75042	75042					-0.04526595593483762
WSFSMGSAYQ	10	Unmodified	_WSFSMGSAYQ_					0	0	0		ENSG00000122012|ENST00000502798|SV2C	ENSG00000122012|ENST00000502798|SV2C	ENSG00000122012|ENST00000502798|SV2C	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	582.2445068359375	2	582.244949	1162.47534	-0.27164	-0.00015816	0.0082861	4.8245E-06	-0.26335	-0.00015334	582.2448885373287	18.032	0.50177	17.411	17.265	17.767	-0.62141					21	10	3	0	0	0	0.86218	1	343	343		32.812	4.9302	1	169080			66093	3206	43886	43904	75043	75043					-0.099393705678267
WSGPRFHMET	10	Unmodified	_WSGPRFHMET_					0	0	0			REV__ENST00000599564.5_2_19:35517171-35517249:+|nuORF	REV__ENST00000599564.5_2_19:35517171-35517249:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	624.28466796875	2	624.28494	1246.55533	0.42538	0.00026556	1.0979	0.00068543	1.5233	0.00095099	624.2855112885089	41.985	0.64436	41.939	41.629	42.273	-0.045467					40	16	3	0	0	0	0.8545	1	2777	2777		36.447	3.6962	1	697550	+		66094	29299	43887	43905	75044	75044					-0.058088841740072894
WSHRRRRPRRR	11	Unmodified	_WSHRRRRPRRR_					0	0	0			REV__ENST00000358344.7_1_5:177631560-177631635:+|nuORF	REV__ENST00000358344.7_1_5:177631560-177631635:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.657958984375	3	540.321063	1617.94136	4.036	0.0021807	-1.5469	-0.00083583	2.4891	0.0013449	540.6547038403598	106.83	1.1664	106.98	106.51	107.68	0.14929					94	46	4	0	0	0	0.89215	1	13029	13029		3.2113	0.18535	1	229550	+		66095	25433	43888	43906	75045	75045					0.15710593567791875
WSIPITGGP	9	Unmodified	_WSIPITGGP_					0	0	0			REV__ENST00000392842.5_1_12:107155714-107155822:+|nuORF	REV__ENST00000392842.5_1_12:107155714-107155822:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	464.2484130859375	2	464.25036	926.486168	-1.4441	-0.00067042	-2.5553	-0.0011863	-3.9994	-0.0018567	464.2489688299292	30.441	1.0617	30.469	30.141	31.202	0.028618					43	23	3	0	0	0	0.58151	1	1979	1979		47.916	7.1374	1	532910	+		66096	26034	43889	43907	75046	75046					0.01998399868762135
WSLNGPGLPLQ	11	Unmodified	_WSLNGPGLPLQ_					0	0	0			REV__ENST00000309863.10_1_2:109065689-109067532:+|nuORF	REV__ENST00000309863.10_1_2:109065689-109067532:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	591.3175659179688	2	591.319306	1180.62406	-0.64143	-0.00037929	1.1914	0.00070451	0.54999	0.00032522	591.3201240825498	66.908	0.89341	66.924	66.652	67.546	0.016205					64	40	2	0	0	0	0.62614	1	6286	6286		41.427	2.1738	1	235670	+		66097	24873	43890	43908	75047	75047					0.04097103397407409
WSMPWYWWRPQ	11	Unmodified	_WSMPWYWWRPQ_					0	0	0			REV__ENST00000584716.1_1_17:30815096-30816294:+|nuORF	REV__ENST00000584716.1_1_17:30815096-30816294:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	541.5061645507812	3	541.583568	1621.72887	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.927	1	22.919	22.419	23.419	-0.0088215								0	0	0	0.56276	1	701	701		9.2118	2.8909	1		+		66098	29085	43891	43909	75048	75048					-0.05712098397702903
WSPAGDEFSL	10	Unmodified	_WSPAGDEFSL_					0	0	0		ENSG00000054116|ENST00000373166|TRAPPC3;nc|ENSG00000054116|O43617-2|TRAPPC3;ENST00000462715.1_1_1:36603336-36605749:-|nuORF	ENSG00000054116|ENST00000373166|TRAPPC3	ENSG00000054116|ENST00000373166|TRAPPC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7784423828125	2	554.750921	1107.48729	0.36145	0.00020052	-0.033018	-1.8317E-05	0.32844	0.0001822	554.7503522692817	49.151	0.5274	50.055	49.765	50.292	0.90424					20	12	2	0	0	0	0.37624	1	4810	4810		34.173	0	1	385710			66099	1014	43892	43910	75049	75049					-0.06215430552992984
WSPLPDSHF	9	Unmodified	_WSPLPDSHF_					0	0	0		ENST00000495270.1_1_9:130697757-130697907:-|nuORF	ENST00000495270.1_1_9:130697757-130697907:-|nuORF	ENST00000495270.1_1_9:130697757-130697907:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	543.2632446289062	2	543.256174	1084.49779	-0.39496	-0.00021457	-0.11773	-6.3959E-05	-0.51269	-0.00027852	543.2558932220526	67.21	0.67165	67.761	67.491	68.163	0.55071					31	15	3	0	0	0	0.64922	1	7359	7359		44.117	9.9443	1	508500			66100	12765	43893	43911	75050	75050					-0.041074031079233464
WSPLQKLLSPN	11	Unmodified	_WSPLQKLLSPN_					0	0	0			REV__ENST00000595638.1_1_19:51485457-51485655:-|nuORF	REV__ENST00000595638.1_1_19:51485457-51485655:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.36376953125	2	641.861338	1281.70812	1.706	0.001095	-4.3678	-0.0028035	-2.6617	-0.0017085	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.71207	1	13068	13068		29.551	0.38069	1	27133000	+		66101	29250	43894	43912	75051	75051					0.07853634494290418
WSPSWLPESQ	10	Unmodified	_WSPSWLPESQ_					0	0	0			REV__ENST00000480527.1_1_3:113222072-113233933:-|nuORF	REV__ENST00000480527.1_1_3:113222072-113233933:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	608.7859497070312	2	608.785296	1215.55604	-0.43936	-0.00026747	-2.2422	-0.001365	-2.6816	-0.0016325	608.78350099605	59.071	0.62346	59.057	58.77	59.393	-0.013729					32	19	2	0	0	0	0.77314	1	5423	5423		40.778	8.8233	1	187030	+		66102	24703	43895	43913	75052	75052					-0.04311766253294991
WSRGPVCV	8	Unmodified	_WSRGPVCV_					0	0	0			REV__ENST00000536896.2_1_1:26146164-26146353:-|nuORF	REV__ENST00000536896.2_1_1:26146164-26146353:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	452.2281188964844	2	452.228905	902.443257	1.1697	0.00052896	-3.091	-0.0013978	-1.9213	-0.00086888	452.22766943283847	107.06	0.98818	107.17	106.77	107.76	0.10396					98	37	5	0	0	0	0.88915	1	13097	13097		35.201	9.7505	1	2682300	+		66103	28417	43896	43914	75053	75053					-0.011866934603290247
WSRRGRKPKP	10	Unmodified	_WSRRGRKPKP_					0	0	0			REV__ENSG00000136826|ENST00000374672|KLF4	REV__ENSG00000136826|ENST00000374672|KLF4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.3768310546875	2	634.378355	1266.74216	-0.13787	-8.7463E-05	-1.7305	-0.0010978	-1.8684	-0.0011852	634.377061455115	118.49	0.49898	118.42	118.19	118.69	-0.07531					48	18	4	0	0	0	0.86047	1	12726	12726		23.523	0.94304	1	1728300	+		66104	19338	43897	43915	75054	75054					0.11945520496556128
WSRVNIPKVLR	11	Unmodified	_WSRVNIPKVLR_					0	0	0		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1	nc|ENSG00000141367|Q00610-2|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	456.6109924316406	3	456.613856	1366.81974	-0.35463	-0.00016193	-3.9816	-0.0018181	-4.3362	-0.00198	456.61192876380494	16.153	0.26143	16.073	15.955	16.216	-0.080017					20	10	3	0	0	0	0.74771	1	91	91		22.562	4.7284	1	50824			66105	14964;1239	43898	43916	75055	75055					0.15100113642074575
WSRVPLVVA	9	Unmodified	_WSRVPLVVA_					0	0	0			REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|48|2|sense	REV__L1PA3_dup7470|chr10:31469211-31475223:+|1.095603533826113|0.1884756112212745|2.54|62.0|48|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	513.8086547851562	2	513.808377	1025.6022	-0.15906	-8.1728E-05	1.3381	0.00068753	1.179	0.0006058	513.8089543036472	47.947	1.7437	47.854	47.52	49.263	-0.093178					139	45	4	0	0	0	0.7932	1	3676	3676		24.203	0	1	1484700	+		66106	29571	43899	43917	75056	75056					0.09042343439477918
WSSQSRKVVHP	11	Unmodified	_WSSQSRKVVHP_					0	0	0			REV__ENSG00000103404|ENST00000219689|USP31	REV__ENSG00000103404|ENST00000219689|USP31	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.5684509277344	3	437.570316	1309.68912	-1.5995	-0.00069989	0.73236	0.00032046	-0.86712	-0.00037943	437.570636572966	34.539	0.60685	34.578	34.333	34.94	0.038643					51	23	3	0	0	0	0.71207	1	1775	1775		29.551	4.4248	1	162580	+		66107	17413	43900	43918	75057	75057					0.04666097923222878
WSTRLKTP	8	Unmodified	_WSTRLKTP_					0	0	0			REV__ENST00000469423.1_1_19:12757375-12758379:-|nuORF	REV__ENST00000469423.1_1_19:12757375-12758379:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.7801208496094	2	494.782359	987.550165	-0.074951	-3.7084E-05	-3.8536	-0.0019067	-3.9285	-0.0019438	494.7803638442577	86.266	4.316	86.334	84.723	89.039	0.067444					229	100	3	0	0	0	0.89494	1	8735	8735		37.159	2.9866	1	651380	+		66108	27194	43901	43919	75058	75058					0.05589180025708629
WSTWRHIA	8	Unmodified	_WSTWRHIA_					0	0	0		ENSG00000113838|ENST00000338733|TBCCD1	ENSG00000113838|ENST00000338733|TBCCD1	ENSG00000113838|ENST00000338733|TBCCD1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.7927856445312	2	528.772326	1055.5301	1.0802	0.0005712	-1.4881	-0.00078688	-0.40789	-0.00021568	529.273799465901	36.088	0.24093	36.369	36.229	36.47	0.28173					7	5	2	0	0	0	0.4196	1	2800	2800		44.117	13.799	1	64836			66109	2749	43902	43920	75059	75059					0.004554290857640808
WSVDPLDR	8	Unmodified	_WSVDPLDR_					0	0	0		ENSG00000148180|ENST00000432226|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396|GSN;ENST00000373806.1_2_9:124089055-124094878:+|nuORF;CON__Q3SX14	ENSG00000148180|ENST00000432226|GSN	ENSG00000148180|ENST00000432226|GSN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.248291015625	2	494.248349	986.482145	-0.077524	-3.8316E-05	-0.074804	-3.6972E-05	-0.15233	-7.5288E-05	494.24818041020933	60.69	0.81922	60.678	60.319	61.139	-0.012203					55	26	3	0	0	0	0.64455	2	5626	5603;5626		69.628	9.6968	1	1029800			66110	4936	43903	43921	75060;75061	75061					-0.011636896249569872
WSVDPLDR	8	Unmodified	_WSVDPLDR_					0	0	0		ENSG00000148180|ENST00000432226|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396|GSN;ENST00000373806.1_2_9:124089055-124094878:+|nuORF;CON__Q3SX14	ENSG00000148180|ENST00000432226|GSN	ENSG00000148180|ENST00000432226|GSN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.247802734375	2	494.248349	986.482145	0.22534	0.00011137	-0.15132	-7.479E-05	0.074015	3.6582E-05	494.2481452855728	60.567	0.76367	60.534	60.174	60.938	-0.032509					55	21	4	0	0	0	0.77771	2	5706	5706;5737		64.207	14.192	1	1135100			66111	4936	43903	43921	75062;75063	75062					-0.011636896249569872
WSVDPLDR	8	Unmodified	_WSVDPLDR_					0	0	0		ENSG00000148180|ENST00000432226|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396|GSN;ENST00000373806.1_2_9:124089055-124094878:+|nuORF;CON__Q3SX14	ENSG00000148180|ENST00000432226|GSN	ENSG00000148180|ENST00000432226|GSN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.24774169921875	2	494.248349	986.482145	-2.4989	-0.0012351	2.4347	0.0012033	-0.06425	-3.1755E-05	494.249462831107	60.499	0.80064	60.53	60.177	60.977	0.0312					55	23	3	0	0	0	0.81485	2	5619	5619;5630		62.107	6.6032	1	1066900			66112	4936	43903	43921	75064;75065	75064					-0.011636896249569872
WSVQALLLLII	11	Unmodified	_WSVQALLLLII_					0	0	0			REV__nc|ENSG00000011465|P07585-5|DCN	REV__nc|ENSG00000011465|P07585-5|DCN	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.3760986328125	2	634.902474	1267.7904	6.6389	0.004215	1.5356	0.00097495	8.1745	0.00519	634.9035367536467	109.88	0.63394	109.95	109.57	110.21	0.068001					47	30	2	0	0	0	0.17625	1	13320	13320		29.17	14.305	1	862970	+		66113	15557	43904	43922	75066	75066					0.16721156573248663
WSVSIPPTGTY	11	Unmodified	_WSVSIPPTGTY_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN	REV__nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.3663330078125	2	604.303321	1206.59209	-0.12687	-7.6666E-05	4.3482	0.0026276	4.2213	0.002551	604.3050667008054	104.73	0.6364	104.77	104.71	105.34	0.039856					24	14	3	0	0	0	0.17226	1	11477	11477		60.118	26.197	1	257410	+		66114	20437;29946	43905	43923	75067	75067					-0.0029430907641199155
WSWTPRPWRRR	11	Unmodified	_WSWTPRPWRRR_					0	0	0		ENST00000586271.1_1_17:76121323-76121878:-|nuORF	ENST00000586271.1_1_17:76121323-76121878:-|nuORF	ENST00000586271.1_1_17:76121323-76121878:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.6074829101562	3	528.620004	1582.83818	0.13541	7.1581E-05	0.74723	0.000395	0.88264	0.00046658	528.6202622479875	74.9	0.45671	75.464	75.208	75.665	0.56458					14	10	2	0	0	0	0.17648	1	8457	8457		21.032	7.5243	1	226270			66115	14160	43906	43924	75068	75068					0.07007668336632378
WSYFPTLYRFI	11	Unmodified	_WSYFPTLYRFI_					0	0	0		ENST00000533632.5_1_11:118894278-118894506:+|nuORF	ENST00000533632.5_1_11:118894278-118894506:+|nuORF	ENST00000533632.5_1_11:118894278-118894506:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	497.7952575683594	3	498.258967	1491.75507	0.33426	0.00016655	2.7427	0.0013666	3.077	0.0015331	498.2595934961944	49.013	0.21066	49.051	48.959	49.17	0.037731					6	4	2	0	0	0	0.18066	1	3763	3763		14.086	3.0878	1	51076			66116	13398	43907	43925	75069	75069					0.02886494045424115
WTAALLLHVGL	11	Unmodified	_WTAALLLHVGL_					0	0	0			REV__ENSG00000146360|ENST00000275169|GPR6	REV__ENSG00000146360|ENST00000275169|GPR6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3582763671875	2	597.355691	1192.69683	1.8574	0.0011095	1.713	0.0010233	3.5703	0.0021328	597.3562688740209	100.02	4.4704	100.37	97.029	101.5	0.34591					218	110	4	0	0	0	0.71452	1	12134	12134		29.15	10.046	1	5142000	+		66117	20008	43908	43926	75070	75070					0.10818857190815834
WTGKSPKQFL	10	Unmodified	_WTGKSPKQFL_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	596.3328247070312	2	596.329673	1190.64479	2.639	0.0015737	2.6396	0.001574	5.2785	0.0031477	596.3311149106801	96.295	3.574	96.239	94.98	98.554	-0.056381					253	83	4	0	0	0	0.67571	1	10332	10332		45.972	2.3215	1	1305600			66118	1181	43909	43927	75071	75071					0.05709693777043867
WTGLRVTLLSD	11	Unmodified	_WTGLRVTLLSD_					0	0	0			REV__nc|ENSG00000157168|Q02297-9|NRG1	REV__nc|ENSG00000157168|Q02297-9|NRG1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	630.8494262695312	2	630.85097	1259.68739	1.4391	0.00090789	-3.9353	-0.0024826	-2.4962	-0.0015747	630.8483297222848	110.34	1.0207	110.45	110.27	111.29	0.11659					74	37	4	0	0	0	0.60058	1	11880	11880		44.377	5.1244	1	1648400	+		66119	29950	43910	43928	75072	75072					0.06793044114624536
WTGLTLHP	8	Unmodified	_WTGLTLHP_					0	0	0			REV__ENST00000483154.5_1_1:173684530-173684626:+|nuORF	REV__ENST00000483154.5_1_1:173684530-173684626:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	462.7497863769531	2	462.750527	923.486502	-0.2387	-0.00011046	0.19116	8.8457E-05	-0.047545	-2.2002E-05	462.75043297512474	47.383	0.53021	47.379	47.092	47.622	-0.0035286					22	15	2	0	0	0	0.884	1	3879	3879		33.516	0.70317	1	194250	+		66120	27483	43911	43929	75073	75073					0.021698195886074245
WTGWMGGQ	8	Unmodified	_WTGWMGGQ_					0	0	0		ENST00000417509.5_1_7:75616545-75617528:-|nuORF	ENST00000417509.5_1_7:75616545-75617528:-|nuORF	ENST00000417509.5_1_7:75616545-75617528:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	461.6980285644531	2	461.697438	921.380322	-0.066011	-3.0477E-05	1.4623	0.00067513	1.3963	0.00064466	461.6979409427762	36.074	0.77336	36.056	35.647	36.42	-0.018673					37	16	3	0	0	0	0.84341	1	2272	2272		24.203	2.5004	1	170510			66121	11412	43912	43930	75074	75074					-0.08351259248354381
WTLALGRPV	9	Unmodified	_WTLALGRPV_					0	0	0		ENST00000507522.1_1_5:253163-256532:+|nuORF	ENST00000507522.1_1_5:253163-256532:+|nuORF	ENST00000507522.1_1_5:253163-256532:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	506.8001403808594	2	506.800552	1011.58655	0.018043	9.144E-06	1.4105	0.00071482	1.4285	0.00072396	506.80125221893354	53.037	1.9797	53.034	52.291	54.271	-0.0033035					105	54	3	0	0	0	0.7932	1	4622	4622		24.203	0	1	173240			66122	12959	43913	43931	75075	75075					0.08122056922422871
WTNWSCSCACP	11	Unmodified	_WTNWSCSCACP_					0	0	0			REV__ENST00000602726.1_1_19:49632066-49632159:+|nuORF	REV__ENST00000602726.1_1_19:49632066-49632159:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	419.8203430175781	3	419.821038	1256.44128	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.278	1	59.264	58.764	59.764	-0.013729								0	0	0	0.56276	1	5432	5432		17.167	0	1		+		66123	29336	43914	43932	75076	75076					-0.1766785832273854
WTRIQIRVN	9	Unmodified	_WTRIQIRVN_					0	0	0		nc|ENSG00000166881|O14524-2|NEMP1;chr12:57064739-57070820|49|20.47|0.9|4.51|-|ENST00000379391|NEMP1,NEMP1;ENSG00000166881|ENST00000300128|NEMP1	nc|ENSG00000166881|O14524-2|NEMP1	nc|ENSG00000166881|O14524-2|NEMP1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	593.3440551757812	2	593.346189	1184.67783	-0.64573	-0.00038314	-2.3039	-0.001367	-2.9496	-0.0017502	593.3447409990578	103.37	2.9628	103.41	103.03	105.99	0.041489					168	71	4	0	0	0	0.78536	1	11222	11222		29.15	4.6304	1	2296600			66124	136	43915	43933	75077	75077					0.09287320619773709
WTRRTLRKAR	10	Unmodified	_WTRRTLRKAR_					0	0	0		chr6:70180523-70184703|18|22.78|0.69|5.05|+|2|COL19A1,COL19A1|1	chr6:70180523-70184703|18|22.78|0.69|5.05|+|2|COL19A1,COL19A1|1	chr6:70180523-70184703|18|22.78|0.69|5.05|+|2|COL19A1,COL19A1|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	448.9438781738281	3	448.609216	1342.80582	0.53519	0.00024009	-0.14819	-6.6478E-05	0.38701	0.00017362	448.6089733377508	76.693	0.99095	76.828	76.468	77.459	0.13478					122	48	3	0	0	0	0.85004	1	7209	7209		17.167	0	1	670390			66125	480	43916	43934	75078	75078					0.14812880933641281
WTSFGSRS	8	Unmodified	_WTSFGSRS_					0	0	0		ENST00000528667.5_1_1:110162570-110163847:+|nuORF	ENST00000528667.5_1_1:110162570-110163847:+|nuORF	ENST00000528667.5_1_1:110162570-110163847:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.7227783203125	2	464.219591	926.42463	-1.8893	-0.00087707	2.0037	0.00093015	0.11435	5.3083E-05	464.2201699937471	35.814	0.52186	35.814	35.524	36.046	0					17	13	2	0	0	0	0.4196	1	2045	2045		35.618	1.4457	1	50943			66126	13306	43917	43935	75079	75079					-0.04152531830504813
WTVPRGLKAKL	11	Unmodified	_WTVPRGLKAKL_					0	0	0			REV__nc|ENSG00000119231|Q96HI0-2|SENP5	REV__nc|ENSG00000119231|Q96HI0-2|SENP5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	423.59771728515625	3	423.599435	1267.77648	-0.96193	-0.00040747	-3.0339	-0.0012851	-3.9958	-0.0016926	423.59805160624353	105.99	2.401	105.99	105.33	107.73	0					158	55	4	0	0	0	0.71803	1	11002	11002		28.577	3.509	1	1845700	+		66127	18344	43918	43936	75080	75080					0.15329923864783268
WVASQFAFAKP	11	Unmodified	_WVASQFAFAKP_					0	0	0			REV__ENST00000399449.3_1_10:75487125-75488312:-|nuORF	REV__ENST00000399449.3_1_10:75487125-75488312:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3291625976562	2	626.329673	1250.64479	-0.52598	-0.00032944	-2.7217	-0.0017047	-3.2477	-0.0020341	626.3277375544901	53.044	1.0318	53.02	52.658	53.69	-0.023849					62	25	3	0	0	0	0.7144	1	4731	4731		29.17	0.020503	1	183520	+		66128	26226	43919	43937	75081	75081					0.029496937770318254
WVCEKQTIT	9	Unmodified	_WVCEKQTIT_					0	0	0		nc|ENSG00000285292|Q9UG63-2|ABCF2;ENSG00000033050|ENST00000287844|ABCF2;ENST00000465687.1_1_3:88367908-88368169:+|nuORF	nc|ENSG00000285292|Q9UG63-2|ABCF2	nc|ENSG00000285292|Q9UG63-2|ABCF2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	554.7797241210938	2	554.278792	1106.54303	0.34287	0.00019005	-3.046	-0.0016883	-2.7031	-0.0014983	554.2768611012594	64.056	0.53665	64.021	63.8	64.337	-0.034248					25	14	2	0	0	0	0.41566	1	6121	6121		56.721	1.9447	1	265730			66129	889	43920	43938	75082	75082					-0.005979206370284373
WVGLIAVICY	10	Unmodified	_WVGLIAVICY_					0	0	0		nc|ENSG00000071967|Q53TN4-3|CYBRD1;ENST00000468308.1_1_2:172378863-172407640:+|nuORF;ENSG00000071967|ENST00000321348|CYBRD1	nc|ENSG00000071967|Q53TN4-3|CYBRD1	nc|ENSG00000071967|Q53TN4-3|CYBRD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	569.8091430664062	2	568.81227	1135.60999	-0.33028	-0.00018787	-0.41905	-0.00023836	-0.74933	-0.00042623	569.3120668126	58.129	0.76871	58.113	57.811	58.58	-0.01643					80	32	4	0	0	0	0.86786	1	4969	4969		26.796	0.10319	1	146260			66130	1264	43921	43939	75083	75083					0.04760734644719378
WVHLLTKS	8	Unmodified	_WVHLLTKS_					0	0	0			REV__ENST00000264930.9_2_5:1050751-1050937:-|nuORF	REV__ENST00000264930.9_2_5:1050751-1050937:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	492.28765869140625	2	492.287277	982.560001	1.6804	0.00082722	-2.3242	-0.0011442	-0.64383	-0.00031695	492.28670249740594	110.53	1.1679	110.59	110.07	111.24	0.054062					79	40	3	0	0	0	0.89494	2	13392	13392;13400		45.952	8.7928	1	260830	+		66131	24481	43922	43940	75084;75085	75084					0.06802368031094375
WVHTDKKKRR	10	Unmodified	_WVHTDKKKRR_					0	0	0			REV__chr17:16106427-16108786|26|14.04|0.39|5.17|-|1|TE_info:Charlie24,Charlie24_dup1256,hAT-Charlie,DNA,acceptor,-,16106266,16106427|None,NCOR1|2	REV__chr17:16106427-16108786|26|14.04|0.39|5.17|-|1|TE_info:Charlie24,Charlie24_dup1256,hAT-Charlie,DNA,acceptor,-,16106266,16106427|None,NCOR1|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.93328857421875	3	451.933588	1352.77894	0.75362	0.00034059	-2.7643	-0.0012493	-2.0107	-0.00090869	451.93229185431755	100.51	2.5005	100.65	99.846	102.35	0.14555					175	59	4	0	0	0	0.86207	1	10454	10454		24.232	2.4514	1	952120	+		66132	15648	43923	43941	75086	75086					0.11665772322407975
WVIAKSGI	8	Unmodified	_WVIAKSGI_					0	0	0		nc|ENSG00000140009|Q92731-7|ESR2;nc|ENSG00000140009|Q92731-6|ESR2;nc|ENSG00000140009|Q92731-9|ESR2;nc|ENSG00000140009|Q92731-5|ESR2;nc|ENSG00000140009|Q92731-2|ESR2;nc|ENSG00000140009|Q92731-4|ESR2;ENSG00000140009|ENST00000341099|ESR2;ENST00000555483.5_1_14:64699857-64724116:-|nuORF	nc|ENSG00000140009|Q92731-7|ESR2	nc|ENSG00000140009|Q92731-7|ESR2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2655944824219	2	437.263271	872.511988	1.7902	0.0007828	4.1025	0.0017939	5.8928	0.0025767	437.26493745569206	22.896	1.5163	22.846	22.466	23.982	-0.050077					136	55	3	0	0	0	0.91977	1	740	740		45.952	12.436	1	738160			66133	4409	43924	43942	75087	75087					0.07063294111037521
WVIVPPPN	8	Unmodified	_WVIVPPPN_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	461.2657165527344	2	461.263271	920.511988	0.74903	0.0003455	4.004	0.0018469	4.753	0.0021924	461.2650179304886	92.74	1.2179	93.186	92.819	94.037	0.44661					57	28	3	0	0	0	0.86791	1	11049	11049		28.254	7.3073	1	317280	+		66134	20074	43925	43943	75088	75088					0.04855294111030162
WVKEKVVAL	9	Unmodified	_WVKEKVVAL_					0	0	0		ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001-7|IL32	ENSG00000008517|ENST00000525643|IL32	ENSG00000008517|ENST00000525643|IL32	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	536.3309326171875	2	536.331685	1070.64882	-0.11869	-6.366E-05	-0.37205	-0.00019954	-0.49075	-0.0002632	536.3314085384316	46.455	0.66819	46.427	46.139	46.807	-0.028778					34	15	3	0	0	0	0.33718	1	3827	3827		62.107	10.772	1	281370			66135	749	43926	43944	75089	75089					0.11631783270763663
WVKEKVVAL	9	Unmodified	_WVKEKVVAL_					0	0	0		ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001-7|IL32	ENSG00000008517|ENST00000525643|IL32	ENSG00000008517|ENST00000525643|IL32	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	536.331685	1070.64882	0.15417	8.2684E-05	-0.47023	-0.0002522	-0.31607	-0.00016952	536.3312277613546	46.581	0.63329	46.567	46.233	46.866	-0.013821	0.066007	-5.8937E-06	NaN	62.107	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	202610			66136	749	43926	43944							0.11631783270763663
WVKEKVVAL	9	Unmodified	_WVKEKVVAL_					0	0	0		ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-6|IL32;nc|ENSG00000008517|P24001-7|IL32	ENSG00000008517|ENST00000525643|IL32	ENSG00000008517|ENST00000525643|IL32	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	536.331685	1070.64882	0.29109	0.00015612	-0.70971	-0.00038064	-0.41862	-0.00022452	536.3311950391395	46.514	0.69087	46.51	46.241	46.932	-0.0041618	0.0085633	-0.00026277	NaN	62.107	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	244290			66137	749	43926	43944							0.11631783270763663
WVKELQRQA	9	Unmodified	_WVKELQRQA_					0	0	0		ENST00000549034.1_1_12:56383771-56384735:+|nuORF;ENST00000537929.1_1_12:4744653-4744893:-|nuORF;ENST00000469122.5_1_3:19992498-20019915:+|nuORF;ENST00000473608.1_1_3:20017064-20025312:+|nuORF;nc|ENSG00000144566|P20339-2|RAB5A;ENSG00000144566|ENST00000273047|RAB5A;ENSG00000111540|ENST00000360299|RAB5B;ENSG00000108774|ENST00000346213|RAB5C;nc|ENSG00000108774|P51148-2|RAB5C	ENST00000549034.1_1_12:56383771-56384735:+|nuORF;nc|ENSG00000144566|P20339-2|RAB5A	nc|ENSG00000144566|P20339-2|RAB5A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	579.322998046875	2	579.324922	1156.63529	-0.41719	-0.00024169	-2.7989	-0.0016215	-3.2161	-0.0018631	579.3231858120126	16.453	0.36677	15.855	15.74	16.107	-0.59873					15	7	3	0	0	0	0.69624	1	133	133		40.778	1.5253	1	477950			66138	13628;2430	43927	43945	75090	75090					0.06323925491528826
WVKRRRRKQAL	11	Unmodified	_WVKRRRRKQAL_					0	0	0			REV__ENST00000507416.1_1_5:60457038-60458278:-|nuORF	REV__ENST00000507416.1_1_5:60457038-60458278:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	499.65032958984375	3	499.651415	1495.93242	0.76945	0.00038446	-4.1989	-0.002098	-3.4294	-0.0017135	499.6492643575954	16.078	0.24442	16.054	15.981	16.225	-0.024035					22	10	3	0	0	0	0.7896	1	118	118		13.508	1.5756	1	118900	+		66139	27906	43928	43946	75091	75091					0.20428807158782547
WVLFILDL	8	Unmodified	_WVLFILDL_					0	0	0		ENST00000534294.5_1_11:118074137-118095689:-|nuORF	ENST00000534294.5_1_11:118074137-118095689:-|nuORF	ENST00000534294.5_1_11:118074137-118095689:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	509.8036193847656	2	509.802229	1017.5899	-0.073627	-3.7535E-05	2.9787	0.0015185	2.905	0.001481	509.8036366749205	86.472	3.8669	86.926	85.593	89.46	0.4543					302	94	4	0	0	0	0.884	1	10026	10026		33.516	33.516	1	3087300			66140	13406	43929	43947	75092	75092					0.08181306976428004
WVPGTTTNEY	10	Unmodified	_WVPGTTTNEY_					0	0	0			REV__ENST00000538600.1_1_12:6631091-6632090:+|nuORF	REV__ENST00000538600.1_1_12:6631091-6632090:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	584.2683715820312	2	584.269478	1166.5244	-0.1426	-8.3315E-05	0.46983	0.00027451	0.32723	0.00019119	584.2694730616828	54.311	0.63082	54.285	53.982	54.613	-0.025955					33	18	3	0	0	0	0.77314	1	4899	4899		40.778	6.6056	1	136280	+		66141	28438	43930	43948	75093	75093					-0.052197590072410094
WVPGTTTNEY	10	Unmodified	_WVPGTTTNEY_					0	0	0			REV__ENST00000538600.1_1_12:6631091-6632090:+|nuORF	REV__ENST00000538600.1_1_12:6631091-6632090:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	584.269478	1166.5244	-0.74026	-0.00043251	0.80551	0.00047064	0.065252	3.8125E-05	584.2696987839968	54.365	0.43322	54.358	54.117	54.55	-0.0065765	0.027499	8.86E-05	NaN	40.778	33	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137850	+		66142	28438	43930	43948							-0.052197590072410094
WVPGTTTNEY	10	Unmodified	_WVPGTTTNEY_					0	0	0			REV__ENST00000538600.1_1_12:6631091-6632090:+|nuORF	REV__ENST00000538600.1_1_12:6631091-6632090:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	584.269478	1166.5244	-0.1426	-8.3315E-05	0.46983	0.00027451	0.32723	0.00019119	584.2694730616828	54.311	0.63082	54.285	53.982	54.613	-0.025955	-0.045218	-0.00030366	NaN	40.778	33	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136280	+		66143	28438	43930	43948							-0.052197590072410094
WVPGTTTNEY	10	Unmodified	_WVPGTTTNEY_					0	0	0			REV__ENST00000538600.1_1_12:6631091-6632090:+|nuORF	REV__ENST00000538600.1_1_12:6631091-6632090:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	584.269478	1166.5244	-1.1427	-0.00066763	1.0387	0.00060689	-0.10395	-6.0733E-05	584.2697697284107	54.326	0.57282	54.348	54.105	54.678	0.022537	0.017719	0.00036111	NaN	40.778	42	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173270	+		66144	28438	43930	43948							-0.052197590072410094
WVPQPLGRVV	10	Unmodified	_WVPQPLGRVV_					0	0	0			REV__ENST00000545336.5_1_12:28343406-28379131:+|nuORF	REV__ENST00000545336.5_1_12:28343406-28379131:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	575.8425903320312	2	575.840208	1149.66586	3.0228	0.0017406	2.3589	0.0013583	5.3817	0.003099	575.8414797521331	103.85	0.96072	103.8	103.49	104.45	-0.043755					51	22	3	0	0	0	0.86718	1	11430	11430		27.882	7.8855	1	491160	+		66145	28444	43931	43949	75094	75094					0.09701703876544343
WVRAILLP	8	Unmodified	_WVRAILLP_					0	0	0		nc|ENSG00000130702|O15230-2|LAMA5	nc|ENSG00000130702|O15230-2|LAMA5	nc|ENSG00000130702|O15230-2|LAMA5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	484.23614501953125	2	484.308013	966.601472	0.23416	0.0001134	2.5103	0.0012157	2.7444	0.0013291	484.309252113958	86.268	0.28078	86.711	86.49	86.771	0.44331					9	6	2	0	0	0	0.4196	1	10069	10069		29.842	0	1	51678			66146	14906	43932	43950	75095	75095					0.11683548790426812
WVRDLLPK	8	Unmodified	_WVRDLLPK_					0	0	0		nc|ENSG00000108406|Q8IX18-4|DHX40;nc|ENSG00000108406|Q8IX18-3|DHX40;nc|ENSG00000108406|Q8IX18-2|DHX40;ENSG00000108406|ENST00000251241|DHX40	nc|ENSG00000108406|Q8IX18-4|DHX40	nc|ENSG00000108406|Q8IX18-4|DHX40	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.8088989257812	2	513.808377	1025.6022	-0.18035	-9.2668E-05	1.1688	0.00060056	0.98848	0.00050789	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.8621	2	4314	4301;4314		31.955	1.2427	1	1777300			66147	2405	43933	43951	75096;75097	75097					0.0904234343945518
WVRPQWRRWWT	11	Unmodified	_WVRPQWRRWWT_					0	0	0			REV__ENSG00000131398|ENST00000477616|KCNC3	REV__ENSG00000131398|ENST00000477616|KCNC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.7664794921875	3	552.960138	1655.85858	0.76222	0.00042148	0.43764	0.000242	1.1999	0.00066347	552.9603533548856	51.107	0.57407	51.858	51.532	52.106	0.75174					29	13	3	0	0	0	0.18425	1	5071	5071		0	0	1	335580	+		66148	18950	43934	43952	75098	75098					0.05688838996434242
WVRPQWRRWWT	11	Unmodified	_WVRPQWRRWWT_					0	0	0			REV__ENSG00000131398|ENST00000477616|KCNC3	REV__ENSG00000131398|ENST00000477616|KCNC3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	552.960138	1655.85858	-0.29355	-0.00016232	1.4196	0.00078497	1.126	0.00062265	552.9610860801283	51.303	0.58282	51.738	51.45	52.033	0.43505	-0.060158	0.00074744	NaN	1.523	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	269100	+		66149	18950	43934	43952							0.05688838996434242
WVRSQARVQEV	11	Unmodified	_WVRSQARVQEV_					0	0	0		nc|ENSG00000110046|Q2TAZ0-5|ATG2A;ENST00000461701.5_1_11:64681808-64684607:-|nuORF	nc|ENSG00000110046|Q2TAZ0-5|ATG2A	nc|ENSG00000110046|Q2TAZ0-5|ATG2A	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	453.24884033203125	3	453.249354	1356.72623	0.66324	0.00030061	-0.60779	-0.00027548	0.05545	2.5133E-05	453.24905718399623	23.771	1.0969	23.827	23.444	24.541	0.055487					76	30	3	0	0	0	0.72892	1	805	805		26.75	0.85799	1	185360			66150	12029	43935	43953	75099	75099					0.062137694689681666
WVRVIVTT	8	Unmodified	_WVRVIVTT_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	487.2923278808594	2	487.295102	972.575651	-1.6564	-0.00080713	-2.3009	-0.0011212	-3.9572	-0.0019283	487.29386636791077	90.875	2.2933	91.055	90.557	92.85	0.18029					120	54	3	0	0	0	0.86288	1	9067	9067		26.796	0.10319	1	1353600	+		66151	23227	43936	43954	75100	75100					0.08826654548136048
WVRVNRRQIL	10	Unmodified	_WVRVNRRQIL_					0	0	0		ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	447.2735595703125	3	447.273834	1338.79967	-0.96193	-0.00043025	-0.94451	-0.00042246	-1.9064	-0.0008527	447.27334022942074	107.78	1.2569	107.78	106.62	107.87	0					73	29	4	0	0	0	0.86802	1	11209	11209		27.047	2.8155	1	32868000			66152	12915	43937	43955	75101	75101					0.1438236270212201
WVSCCYVR	8	Unmodified	_WVSCCYVR_					0	0	0		ENST00000354179.8_2_5:176675260-176678806:+|nuORF	ENST00000354179.8_2_5:176675260-176678806:+|nuORF	ENST00000354179.8_2_5:176675260-176678806:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	508.2227478027344	2	508.228048	1014.44154	0.48123	0.00024458	-1.2891	-0.00065516	-0.80786	-0.00041058	508.2272726076966	29.839	0.45818	29.85	29.607	30.065	0.011229					31	22	2	0	0	0	0.87922	1	1286	1286		31.955	5.1588	1	65583			66153	10332	43938	43956	75102	75102					-0.06510070540582547
WVSGAMTFFY	10	Oxidation (M)	_WVSGAM(Oxidation (M))TFFY_		WVSGAM(1)TFFY		WVSGAM(59)TFFY	0	0	1			REV__ENSG00000104290|ENST00000240093|FZD3	REV__ENSG00000104290|ENST00000240093|FZD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	612.7744750976562	2	612.773342	1223.53213	-0.29935	-0.00018344	1.9448	0.0011917	1.6455	0.0010083	612.7745846223667	51.863	0.98487	51.861	51.526	52.511	-0.0020447					49	22	3	0	0	0	0.46422	1	4466	4466		58.782	14.405	1	349660	+		66154	17444	43939	43957	75103	75103		250			-0.07069323011296547
WVTGAMTFFY	10	Unmodified	_WVTGAMTFFY_					0	0	0			REV__ENST00000521195.1_1_8:104320096-104343734:+|nuORF	REV__ENST00000521195.1_1_8:104320096-104343734:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.2514038085938	2	611.78371	1221.55287	0.44652	0.00027317	-2.4587	-0.0015042	-2.0122	-0.001231	611.7823178893964	60.945	0.27728	60.912	60.747	61.024	-0.032509					11	9	2	0	0	0	0.37624	1	5755	5755		21.96	14.155	1	74756	+		66155	21130	43940	43958	75104	75104					-0.049047326316440376
WVVVCRAVQ	9	Unmodified	_WVVVCRAVQ_					0	0	0		nc|ENSG00000124568|Q14916-2|SLC17A1;ENSG00000124568|ENST00000244527|SLC17A1	nc|ENSG00000124568|Q14916-2|SLC17A1	nc|ENSG00000124568|Q14916-2|SLC17A1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.841796875	2	530.292037	1058.56952	-0.18601	-9.8642E-05	-1.8395	-0.00097549	-2.0256	-0.0010741	530.791678087555	25.609	0.078712	25.672	25.616	25.695	0.063122					5	3	2	0	0	0	0.20789	1	938	938		24.203	10.749	1	21537			66156	3341	43941	43959	75105	75105					0.04257813044955583
WVWVPTVGA	9	Unmodified	_WVWVPTVGA_					0	0	0		ENST00000175756.9_1_2:131132254-131132749:+|nuORF	ENST00000175756.9_1_2:131132254-131132749:+|nuORF	ENST00000175756.9_1_2:131132254-131132749:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	507.77667236328125	2	507.774003	1013.53345	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.4	1	40.356	39.856	40.856	-0.043694								0	0	0	0.2969	1	2967	2967		31.955	0	1				66157	9084	43942	43960	75106	75106					0.02722679139765205
WWAVLDPK	8	Unmodified	_WWAVLDPK_					0	0	0		nc|ENSG00000114439|Q8WY36-3|BBX;nc|ENSG00000114439|Q8WY36-2|BBX;ENSG00000114439|ENST00000325805|BBX	nc|ENSG00000114439|Q8WY36-3|BBX;nc|ENSG00000114439|Q8WY36-2|BBX	nc|ENSG00000114439|Q8WY36-3|BBX	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	508.617431640625	2	507.774003	1013.53345	-1.0085	-0.0005121	-2.8444	-0.0014443	-3.8529	-0.0019564	507.7724578108209	38.92	0.68603	38.873	38.556	39.242	-0.047005					23	15	2	0	0	0	0.4196	1	2742	2742		14.865	1.0895	1	60300			66158	14854;2770	43943	43961	75107	75107					0.027226791397424677
WWEKRQHYREN	11	Unmodified	_WWEKRQHYREN_					0	0	0		ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	544.9322509765625	3	544.599046	1630.77531	-1.6855	-0.00091794	-0.89439	-0.00048708	-2.5799	-0.001405	544.5984134081739	18.891	0.86393	18.891	18.488	19.351	0					62	29	4	0	0	0	0.81219	1	371	371		8.7993	2.1397	1	272400			66159	11333	43944	43962	75108	75108					-0.014849422420638803
WWEKRQHYREN	11	Unmodified	_WWEKRQHYREN_					0	0	0		ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	544.59716796875	3	544.599046	1630.77531	0.77982	0.00042469	-3.4726	-0.0018912	-2.6928	-0.0014665	544.5970482837994	18.741	1.154	18.815	18.483	19.637	0.073465					87	38	5	0	0	0	0.81219	2	341	332;341		8.7993	2.0333	1	464850			66160	11333	43944	43962	75109;75110	75110					-0.014849422420638803
WWEKRQHYREN	11	Unmodified	_WWEKRQHYREN_					0	0	0		ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	544.9271850585938	3	544.599046	1630.77531	0.44795	0.00024396	-3.1008	-0.0016887	-2.6529	-0.0014448	544.5971942899829	19.073	1.2025	18.999	18.407	19.61	-0.073704					84	34	5	0	0	0	0.79716	2	423	383;423		11.932	5.2728	1	560170			66161	11333	43944	43962	75111;75112	75112					-0.014849422420638803
WWEKRQHYREN	11	Unmodified	_WWEKRQHYREN_					0	0	0		ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	544.5973510742188	3	544.599046	1630.77531	0.98935	0.0005388	-3.7064	-0.0020185	-2.7171	-0.0014797	544.5968958201821	19.125	0.85039	19.05	18.752	19.602	-0.074974					76	31	5	0	0	0	0.81219	1	393	393		8.7993	2.4784	1	439030			66162	11333	43944	43962	75113	75113					-0.014849422420638803
WWEKRQHYREN	11	Unmodified	_WWEKRQHYREN_					0	0	0		ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	544.5978393554688	3	544.599046	1630.77531	0.91583	0.00049876	-3.4217	-0.0018635	-2.5059	-0.0013647	544.5970536364644	18.759	0.65699	18.735	18.389	19.046	-0.024035					65	29	4	0	0	0	0.8498	1	368	368		6.001	2.382	1	630050			66163	11333	43944	43962	75114	75114					-0.014849422420638803
WWEKRQHYREN	11	Unmodified	_WWEKRQHYREN_					0	0	0		ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	ENST00000411999.1_1_2:197893450-197893558:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	544.5983276367188	3	544.599046	1630.77531	0.090088	4.9062E-05	-2.57	-0.0013996	-2.4799	-0.0013506	544.5975258990705	19.864	1.3438	19.394	18.745	20.089	-0.46967					66	28	5	0	0	0	0.8498	1	561	561		6.001	2.5923	1	824280			66164	11333	43944	43962	75115	75115					-0.014849422420638803
WWFCGIER	8	Unmodified	_WWFCGIER_					0	0	0		SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|10|1|sense	SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|10|1|sense	SVA_D_dup95|chr1:172571123-172572716:+|1.5440833445167486|0.2489009386598083|2.63|63.0|10|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	548.7575073242188	2	548.755287	1095.49602	0.32793	0.00017995	2.1762	0.0011942	2.5041	0.0013741	548.7562409902832	51.637	0.64779	51.649	51.354	52.002	0.012436					33	15	3	0	0	0	0.89962	1	4466	4466		38.806	3.6541	1	161610			66165	30337	43945	43963	75116	75116					-0.04790735397500612
WWNNWDERRHH	11	Unmodified	_WWNNWDERRHH_					0	0	0			REV__ENST00000580900.5_2_9:21802683-21815463:+|nuORF	REV__ENST00000580900.5_2_9:21802683-21815463:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.9111328125	3	545.915257	1634.72394	-1.6017	-0.00087437	-1.5886	-0.00086722	-3.1902	-0.0017416	546.2485727659065	25.865	0.46053	25.865	25.691	26.151	0					42	20	3	0	0	0	0.77205	2	965	965;980		17.167	3.0807	1	73372	+		66166	29041	43946	43964	75117;75118	75117					-0.06803266216138582
WWNNWDERRHH	11	Unmodified	_WWNNWDERRHH_					0	0	0			REV__ENST00000580900.5_2_9:21802683-21815463:+|nuORF	REV__ENST00000580900.5_2_9:21802683-21815463:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	546.2473754882812	3	545.915257	1634.72394	0.45505	0.00024842	-4.0282	-0.0021991	-3.5731	-0.0019506	545.9131161480681	25.997	0.72197	25.959	25.614	26.336	-0.038607					41	16	4	0	0	0	0.78391	1	1151	1151		14.694	4.1069	1	82289	+		66167	29041	43946	43964	75119	75119					-0.06803266216138582
WWRKQRRYSMR	11	Unmodified	_WWRKQRRYSMR_					0	0	0			REV__ENSG00000114374|ENST00000338981|USP9Y;REV__nc|ENSG00000124486|Q93008-3|USP9X	REV__ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.626220703125	3	551.628282	1651.86302	-0.61952	-0.00034174	-2.4977	-0.0013778	-3.1172	-0.0017195	551.6269937080965	55.487	0.64227	55.477	55.161	55.804	-0.010136					41	16	3	0	0	0	0.86672	1	4949	4949		4.8861	1.6748	1	192040	+		66168	18042;18587	43947	43965	75120	75120					0.06315980147701339
WWRNWFWVHFS	11	Unmodified	_WWRNWFWVHFS_					0	0	0		ENST00000437634.1_1_2:154277901-154278186:-|nuORF	ENST00000437634.1_1_2:154277901-154278186:-|nuORF	ENST00000437634.1_1_2:154277901-154278186:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.265380859375	3	550.929955	1649.76804	1.0042	0.00055325	-3.3904	-0.0018679	-2.3862	-0.0013146	551.2624489494606	19.387	0.38644	19.312	19.105	19.491	-0.074974					20	12	2	0	0	0	0.8498	1	418	418		6.001	2.7897	1	40668			66169	11739	43948	43966	75121	75121					-0.03085630051850785
WWRQVLEKLLA	11	Unmodified	_WWRQVLEKLLA_					0	0	0		ENSG00000214681|ENST00000446461|IQCF5	ENSG00000214681|ENST00000446461|IQCF5	ENSG00000214681|ENST00000446461|IQCF5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.2818603515625	3	481.281995	1440.82415	-0.57975	-0.00027902	4.4374	0.0021357	3.8577	0.0018566	481.28359993784676	102.78	2.1606	102.82	102.1	104.26	0.04319					140	52	5	0	0	0	0.72374	1	11163	11163		27.644	5.0823	1	978410			66170	8631	43949	43967	75122	75122					0.12137578064994159
WWRWRRARWQP	11	Unmodified	_WWRWRRARWQP_					0	0	0		nc|ENSG00000171160|Q8NDC4-2|MORN4	nc|ENSG00000171160|Q8NDC4-2|MORN4	nc|ENSG00000171160|Q8NDC4-2|MORN4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	562.7445678710938	3	561.967515	1682.88072	-1.552	-0.00087219	-3.1386	-0.0017638	-4.6906	-0.002636	561.9664560411717	43.08	1.3354	43.854	42.808	44.143	0.7738					45	32	3	0	0	0	0.1841	1	3855	3855		1.3219	1.3219	1	279350			66171	15092	43950	43968	75123	75123					0.06659063464871906
WWVQSIKKYKK	11	Unmodified	_WWVQSIKKYKK_					0	0	0			REV__chr4:161917254-161920404|18|21.33|0.03|9.5|-|2|TE_info:AluSg7,AluSg7_dup2205,Alu,SINE,acceptor,-,161916948,161917254|None,FSTL5|2	REV__chr4:161917254-161920404|18|21.33|0.03|9.5|-|2|TE_info:AluSg7,AluSg7_dup2205,Alu,SINE,acceptor,-,161916948,161917254|None,FSTL5|2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.9563293457031	3	498.625761	1492.85546	-1.9133	-0.00095401	-3.6259	-0.001808	-5.5392	-0.002762	498.62386245575794	21.686	1.0367	21.686	21.107	22.144	0					71	45	2	0	0	0	0.7896	1	587	587		13.508	1.5756	1	49754	+		66172	15824	43951	43969	75124	75124					0.1287415109907215
WWWRWLRRRR	10	Unmodified	_WWWRWLRRRR_					0	0	0			REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.3160400390625	3	552.979755	1655.91744	-0.43903	-0.00024278	3.1443	0.0017387	2.7052	0.0014959	552.9811058363465	109.91	1.6295	109.91	109.54	111.17	0					118	60	3	0	0	0	0.91405	9	11536	11433;11442;11449;11458;11479;11488;11497;11514;11536		7.0187	6.491	1	310920	+		66173	15547	43952	43970	75125;75126;75127;75128;75129;75130;75131;75132;75133	75133					0.11571360081393323
WWWRWLRRRR	10	Unmodified	_WWWRWLRRRR_					0	0	0			REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	552.9796142578125	3	552.979755	1655.91744	3.3572	0.0018565	-1.1886	-0.00065727	2.1686	0.0011992	552.9788663346167	110.66	1.2901	110.63	110.07	111.36	-0.026314					80	39	3	0	0	0	0.93363	3	12269	12269;12279;12295		4.0829	3.5552	1	394660	+		66174	15547	43952	43970	75134;75135;75136	75134					0.11571360081393323
WWWRWLRRRR	10	Unmodified	_WWWRWLRRRR_					0	0	0			REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	552.9805908203125	3	552.979755	1655.91744	1.2833	0.00070966	0.8265	0.00045704	2.1098	0.0011667	552.9800075788518	110.6	1.1701	110.63	110.1	111.27	0.031738					90	38	3	0	0	0	0.88463	4	12082	12064;12082;12101;12135		11.636	9.608	1	532550	+		66175	15547	43952	43970	75137;75138;75139;75140	75138					0.11571360081393323
WWWRWLRRRR	10	Unmodified	_WWWRWLRRRR_					0	0	0			REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.9813842773438	3	552.979755	1655.91744	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.62	1	110.7	110.2	111.2	0.073685								0	0	0	0.45132	1	11896	11896		1.7563	1.3849	1		+		66176	15547	43952	43970	75141	75141					0.11571360081393323
WWWRWLRRRR	10	Unmodified	_WWWRWLRRRR_					0	0	0			REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.9822998046875	3	552.979755	1655.91744	-1.4425	-0.00079765	3.7547	0.0020763	2.3122	0.0012786	553.316321902742	110.55	0.99976	110.55	109.83	110.83	-0.0074387					58	31	3	0	0	0	0.9301	2	11711	11711;11811		4.6126	4.0849	1	522110	+		66177	15547	43952	43970	75142;75143	75142					0.11571360081393323
WWWRWLRRRR	10	Unmodified	_WWWRWLRRRR_					0	0	0			REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.98046875	3	552.979755	1655.91744	5.5507	0.0030694	-3.0011	-0.0016596	2.5495	0.0014098	552.9777392564661	110.33	0.49255	110.4	110.12	110.61	0.067993					37	15	4	0	0	0	0.94914	2	13369	13369;13399		1.7563	1.2286	1	444250	+		66178	15547	43952	43970	75144;75145	75144					0.11571360081393323
WWWRWLRRRR	10	Unmodified	_WWWRWLRRRR_					0	0	0			REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	552.979755	1655.91744	1.2829	0.0007094	1.2225	0.00067601	2.5054	0.0013854	552.9801196692155	109.97	0.30166	110	109.85	110.15	0.033096	0.036713	-0.0024309	NaN	7.0187	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	556240	+		66179	15547	43952	43970							0.11571360081393323
WWWRWLRRRR	10	Unmodified	_WWWRWLRRRR_					0	0	0			REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	REV__chr12:54283228-54283827|63|281.56|0.0|24.75|+|1|HNRNPA1,HNRNPA1|2	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	552.979755	1655.91744	0.85411	0.00047231	1.5408	0.00085204	2.3949	0.0013244	552.9799527703864	109.9	0.15318	109.98	109.87	110.03	0.078552	0.015351	-0.0019028	NaN	7.0187	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	386150	+		66180	15547	43952	43970							0.11571360081393323
WWYRPFQYFEK	11	Unmodified	_WWYRPFQYFEK_					0	0	0		nc|ENSG00000198964|Q86VZ5-2|SGMS1;ENSG00000198964|ENST00000361781|SGMS1	nc|ENSG00000198964|Q86VZ5-2|SGMS1	nc|ENSG00000198964|Q86VZ5-2|SGMS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.60107421875	3	550.601504	1648.78268	0.040051	2.2052E-05	-0.73966	-0.00040726	-0.69961	-0.00038521	550.6010798593529	19.046	0.92437	18.416	18.15	19.075	-0.62961					45	20	4	0	0	0	0.81407	1	461	461		8.4073	5.1959	1	424390			66181	8383	43953	43971	75146	75146					-0.015756026943790857
WYLKRVKSA	9	Unmodified	_WYLKRVKSA_					0	0	0			REV__ENST00000409988.7_1_2:201171099-201171237:+|nuORF	REV__ENST00000409988.7_1_2:201171099-201171237:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.8427734375	2	575.840208	1149.66586	0.61103	0.00035186	4.0503	0.0023323	4.6613	0.0026842	575.8424289061184	92.289	5.5981	92.51	91.261	96.859	0.22157					430	133	5	0	0	0	0.78983	1	9454	9454		27.882	3.3631	1	6623700	+		66182	26363	43954	43972	75147	75147					0.0970170387656708
WYMDEEYRRME	11	Unmodified	_WYMDEEYRRME_					0	0	0			REV__ENSG00000056097|ENST00000265069|ZFR	REV__ENSG00000056097|ENST00000265069|ZFR	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	536.1651000976562	3	536.558759	1606.65445	-0.10266	-5.5081E-05	2.7137	0.0014561	2.611	0.001401	536.5610589912624	22.037	0.17993	22.086	21.985	22.164	0.048553					10	8	2	0	0	0	0.1823	1	637	637		15.337	8.6779	1	34580	+		66183	16417	43955	43973	75148	75148					-0.12461274062093253
WYWRRRPKRLS	11	Unmodified	_WYWRRRPKRLS_					0	0	0		ENSG00000172935|ENST00000309099|MRGPRF	ENSG00000172935|ENST00000309099|MRGPRF	ENSG00000172935|ENST00000309099|MRGPRF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	535.3258666992188	3	535.307537	1602.90078	3.4775	0.0018616	-0.97881	-0.00052396	2.4987	0.0013376	535.6409820599056	107.89	0.1106	107.86	107.77	107.88	-0.031487					4	2	2	0	0	0	0.18185	1	11969	11969		16.53	10.831	1	910790			66184	6805	43956	43974	75149	75149					0.12344814404832505
WYWRRRPKRLS	11	Unmodified	_WYWRRRPKRLS_					0	0	0		ENSG00000172935|ENST00000309099|MRGPRF	ENSG00000172935|ENST00000309099|MRGPRF	ENSG00000172935|ENST00000309099|MRGPRF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.8119506835938	3	535.307537	1602.90078	0.020113	1.0767E-05	2.7678	0.0014816	2.7879	0.0014924	535.3084906524122	99.152	0.49751	99.375	99.287	99.785	0.22262					16	11	2	0	0	0	0.18307	1	10322	10322		2.389	0	1	64497			66185	6805	43956	43974	75150	75150					0.12344814404832505
YAALHGEFY	9	Unmodified	_YAALHGEFY_					0	0	0		ENSG00000136490|ENST00000259006|LIMD2	ENSG00000136490|ENST00000259006|LIMD2	ENSG00000136490|ENST00000259006|LIMD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	535.750244140625	2	535.750724	1069.4869	0.44202	0.00023681	-0.57739	-0.00030934	-0.13537	-7.2525E-05	535.7502975136521	54.115	0.92248	54.522	54.153	55.075	0.40663					49	21	3	0	0	0	0.015388	4	5513	5480;5488;5500;5513		128.82	48.783	1	3292400			66186	4114	43957	43975	75151;75152;75153;75154	75154					-0.04506805482196796
YAALHGEFY	9	Unmodified	_YAALHGEFY_					0	0	0		ENSG00000136490|ENST00000259006|LIMD2	ENSG00000136490|ENST00000259006|LIMD2	ENSG00000136490|ENST00000259006|LIMD2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.75048828125	2	535.750724	1069.4869	-0.6791	-0.00036383	0.61663	0.00033036	-0.062471	-3.3469E-05	535.7509280336492	53.897	1.0463	54.481	54.206	55.253	0.58474					54	24	3	0	0	0	0.036317	5	5478	5467;5478;5490;5503;5518		114.59	56.775	1	3601300			66187	4114	43957	43975	75155;75156;75157;75158;75159	75156					-0.04506805482196796
YAAVHVHT	8	Unmodified	_YAAVHVHT_					0	0	0		nc|ENSG00000100034|P49593-2|PPM1F;ENSG00000100034|ENST00000263212|PPM1F	nc|ENSG00000100034|P49593-2|PPM1F	nc|ENSG00000100034|P49593-2|PPM1F	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.2321472167969	2	449.232502	896.450451	-0.14348	-6.4457E-05	-4.0788	-0.0018323	-4.2223	-0.0018968	449.2306007992336	83.429	3.7259	83.496	82.088	85.814	0.066719					221	85	3	0	0	0	0.87276	1	8353	8353		29.842	1.5873	1	236580			66188	1788	43958	43976	75160	75160					-0.0019163758823879107
YACPGKRMNEP	11	Unmodified	_YACPGKRMNEP_					0	0	0		ENST00000432045.6_1_7:130565395-130565941:-|nuORF	ENST00000432045.6_1_7:130565395-130565941:-|nuORF	ENST00000432045.6_1_7:130565395-130565941:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.2894897460938	2	633.291908	1264.56926	-1.0664	-0.00067533	0.21669	0.00013723	-0.84969	-0.0005381	633.291842747174	31.086	0.44016	31.086	30.888	31.328	0					18	14	2	0	0	0	0.71207	1	1481	1481		9.1829	0	1	26091			66189	11658	43959	43977	75161	75161					-0.052439747372091006
YADVAACL	8	Unmodified	_YADVAACL_					0	0	0			REV__ENST00000413628.5_1_1:68568378-68586877:+|nuORF	REV__ENST00000413628.5_1_1:68568378-68586877:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1936340332031	2	413.194196	824.37384	0.37594	0.00015534	-2.7567	-0.0011391	-2.3808	-0.00098372	413.1933424358141	82.469	1.3874	82.896	82.352	83.74	0.42663					91	33	5	0	0	0	0.83466	1	9586	9586		23.037	2.5549	1	2821200	+		66190	26394	43960	43978	75162	75162					-0.0453719719973833
YADVILQLVN	10	Unmodified	_YADVILQLVN_					0	0	0			REV__nc|ENSG00000259207|P05106-2|ITGB3	REV__nc|ENSG00000259207|P05106-2|ITGB3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3190307617188	2	574.321514	1146.62847	0.59155	0.00033974	-4.0871	-0.0023473	-3.4955	-0.0020075	574.3190506769714	94.224	5.1152	94.453	92.75	97.865	0.22863					296	122	4	0	0	0	0.8651	1	9541	9541		25.574	1.3713	1	1777600	+		66191	23932	43961	43979	75163	75163					0.061025678202895506
YAELVGTG	8	Unmodified	_YAELVGTG_					0	0	0			REV__ENSG00000128513|ENST00000357628|POT1	REV__ENSG00000128513|ENST00000357628|POT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.20489501953125	2	405.205618	808.396684	-1.8327	-0.00074263	-0.28531	-0.00011561	-2.118	-0.00085824	405.2053907770918	78.166	2.3399	78.293	77.472	79.812	0.12695					159	78	3	0	0	0	0.86288	1	7288	7288		26.796	1.3459	1	136600	+		66192	18775	43962	43980	75164	75164					-0.015178548106177914
YAELVGTG	8	Unmodified	_YAELVGTG_					0	0	0			REV__ENSG00000128513|ENST00000357628|POT1	REV__ENSG00000128513|ENST00000357628|POT1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	405.205618	808.396684	-1.8327	-0.00074263	-0.28531	-0.00011561	-2.118	-0.00085824	405.2053907770918	78.166	2.3399	78.293	77.472	79.812	0.12695	0.11633	9.4151E-05	NaN	26.796	159	78	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136600	+		66193	18775	43962	43980							-0.015178548106177914
YAELVGTG	8	Unmodified	_YAELVGTG_					0	0	0			REV__ENSG00000128513|ENST00000357628|POT1	REV__ENSG00000128513|ENST00000357628|POT1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	405.205618	808.396684	-1.5761	-0.00063864	-0.51035	-0.0002068	-2.0864	-0.00084543	405.2055033115724	77.969	2.8025	78.06	77.231	80.034	0.091438	-0.11633	-8.8221E-05	NaN	26.796	152	102	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93849	+		66194	18775	43962	43980							-0.015178548106177914
YAEVGRVL	8	Unmodified	_YAEVGRVL_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-7|ANKRD17	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-7|ANKRD17	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7552490234375	2	453.75581	905.497067	-1.4172	-0.00064305	1.0572	0.00047972	-0.35995	-0.00016333	453.756072585027	45.762	0.76937	46.234	45.767	46.536	0.47139					44	18	4	0	0	0	0.48059	2	4275	4275;4287		76.774	7.9873	1	2274200			66195	14916;14922	43963	43981	75165;75166	75165					0.04053802243049631
YAEVGRVL	8	Unmodified	_YAEVGRVL_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-7|ANKRD17	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-7|ANKRD17	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	453.7555236816406	2	453.75581	905.497067	-0.60806	-0.00027591	0.16607	7.5357E-05	-0.44198	-0.00020055	453.7557063455393	45.582	0.96084	46.477	45.883	46.843	0.89542					46	23	3	0	0	0	0.36305	3	4256	4256;4268;4282		84.916	8.1414	1	2409400			66196	14916;14922	43963	43981	75167;75168;75169	75167					0.04053802243049631
YAEVRGLV	8	Unmodified	_YAEVRGLV_					0	0	0			REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	453.7558288574219	2	453.75581	905.497067	-1.4172	-0.00064305	1.0572	0.00047972	-0.35995	-0.00016333	453.756072585027	45.762	0.76937	46.234	45.767	46.536	0.47139					44	18	4	0	0	0	0.66521	1	4264	4264		68.787	0	1	2274200	+		66197	20923	43964	43982	75170	75170					0.04053802243061
YAEVVLNNL	9	Unmodified	_YAEVVLNNL_					0	0	0			REV__nc|ENSG00000105855|P26012-2|ITGB8	REV__nc|ENSG00000105855|P26012-2|ITGB8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.7803344726562	2	517.779482	1033.54441	0.69243	0.00035852	-0.91927	-0.00047598	-0.22685	-0.00011746	517.7789468912191	76.822	0.51677	77.222	77.025	77.541	0.39969					29	18	2	0	0	0	0.55097	1	8732	8732		49.442	1.7842	1	414760	+		66198	17575	43965	43983	75171	75171					0.028980367233771176
YAFDFARQS	9	Unmodified	_YAFDFARQS_					0	0	0		nc|ENSG00000109184|Q92564-2|DCUN1D4	nc|ENSG00000109184|Q92564-2|DCUN1D4	nc|ENSG00000109184|Q92564-2|DCUN1D4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	552.7584838867188	2	552.759081	1103.50361	-0.13811	-7.6341E-05	1.3897	0.00076816	1.2516	0.00069182	552.7591759764422	53.621	0.70815	54.035	53.745	54.453	0.4139					34	16	3	0	0	0	0.29259	1	5419	5419		65.465	8.7443	1	1028600			66199	14839	43966	43984	75172	75172					-0.04400304596242677
YAFDFARQS	9	Unmodified	_YAFDFARQS_					0	0	0		nc|ENSG00000109184|Q92564-2|DCUN1D4	nc|ENSG00000109184|Q92564-2|DCUN1D4	nc|ENSG00000109184|Q92564-2|DCUN1D4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7579956054688	2	552.759081	1103.50361	-0.35563	-0.00019658	0.53774	0.00029724	0.1821	0.00010066	552.7592011275754	53.387	0.66977	54.001	53.778	54.448	0.61436					27	14	3	0	0	0	0.065196	2	5403	5403;5412		101.6	29.723	1	950510			66200	14839	43966	43984	75173;75174	75173					-0.04400304596242677
YAFFKLLRDRL	11	Unmodified	_YAFFKLLRDRL_					0	0	0		ENST00000468135.5_1_1:32542241-32568271:+|nuORF;ENSG00000121775|ENST00000336294|TMEM39B;nc|ENSG00000121775|Q9GZU3-4|TMEM39B;ENST00000476968.5_1_1:32560475-32568271:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF;ENST00000476968.5_1_1:32560475-32568271:+|nuORF	ENST00000468135.5_1_1:32542241-32568271:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	481.283935546875	3	481.281995	1440.82415	-1.6759	-0.00080659	3.9511	0.0019016	2.2751	0.001095	481.28381060861284	101.58	1.5224	101.74	100.8	102.32	0.15505					100	37	3	0	0	0	0.79476	1	10583	10583		12.433	0.50046	1	436410			66201	3198;12349	43967	43985	75175	75175					0.12137578064971422
YAFKISFI	8	Unmodified	_YAFKISFI_					0	0	0		ENSG00000236398|ENST00000446620|TAS2R39	ENSG00000236398|ENST00000446620|TAS2R39	ENSG00000236398|ENST00000446620|TAS2R39	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7808837890625	2	494.778754	987.542954	-0.98597	-0.00048784	4.4639	0.0022086	3.4779	0.0017208	494.7808639003072	86.45	3.9467	86.45	85.096	89.043	0					194	91	3	0	0	0	0.92973	1	8108	8108		50.025	12.865	1	385180			66202	8755	43968	43986	75176	75176					0.04868447425269551
YAFLLALF	8	Unmodified	_YAFLLALF_					0	0	0		ENSG00000274102|ENST00000614722|OR4M2	ENSG00000274102|ENST00000614722|OR4M2	ENSG00000274102|ENST00000614722|OR4M2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	479.27813720703125	2	479.275847	956.537141	2.2671	0.0010866	1.6123	0.00077275	3.8795	0.0018593	479.2765493533754	97.406	1.666	97.351	96.889	98.555	-0.055542					99	38	4	0	0	0	0.88393	1	10506	10506		33.493	4.3434	1	975730			66203	8991	43969	43987	75177	75177					0.05713348913604932
YAFSVASLPH	10	Unmodified	_YAFSVASLPH_					0	0	0			REV__nc|ENSG00000154529|Q96NU0-2|CNTNAP3B	REV__nc|ENSG00000154529|Q96NU0-2|CNTNAP3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	546.2760009765625	2	546.279649	1090.54475	0.39116	0.00021368	-0.80434	-0.00043939	-0.41318	-0.00022571	546.2791140327308	49.579	0.79688	49.583	49.235	50.032	0.0035973					30	17	2	0	0	0	0.37951	1	4189	4189		65.803	9.0821	1	127160	+		66204	20392	43970	43988	75178	75178					0.003094564432331026
YAGGGGGG	8	Unmodified	_YAGGGGGG_					0	0	0			REV__ENSG00000169184|ENST00000302326|MN1	REV__ENSG00000169184|ENST00000302326|MN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	595.307861328125	1	595.247066	594.239789	-0.20888	-0.00012433	1.5565	0.00092647	1.3476	0.00080214	595.2492532186477	62.036	0.2173	62.59	62.429	62.646	0.55449					6	4	2	0	0	0	0.4196	1	6641	6641		1.619	0	1	53339	+		66205	21559	43971	43989	75179	75179					-0.07356094910267075
YAGHRLLFI	9	Unmodified	_YAGHRLLFI_					0	0	0			REV__ENSG00000154237|ENST00000388948|LRRK1	REV__ENSG00000154237|ENST00000388948|LRRK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.31689453125	2	545.313826	1088.6131	1.0848	0.00059155	4.2039	0.0022924	5.2887	0.002884	545.315967153513	102.19	0.76801	102.46	102.11	102.88	0.26322					52	18	4	0	0	0	0.77546	1	12405	12405		31.955	4.9075	1	914450	+		66206	20374	43972	43990	75180	75180					0.0723374581373264
YAGKKRRLQP	10	Unmodified	_YAGKKRRLQP_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2;ENST00000574518.1_1_17:7674005-7689702:+|nuORF	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2473449707031	3	406.247285	1215.72002	-1.9255	-0.00078224	3.2352	0.0013143	1.3097	0.00053205	406.2488796239332	27.321	0.22915	27.39	27.309	27.538	0.06868					12	11	2	0	0	0	0.85441	1	1091	1091		20.837	2.3061	1	35917			66207	7573	43973	43991	75181	75181					0.12079296028127828
YAGKKRRLQP	10	Unmodified	_YAGKKRRLQP_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2;ENST00000574518.1_1_17:7674005-7689702:+|nuORF	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		3	406.247285	1215.72002	0.36712	0.00014914	1.3782	0.00055991	1.7454	0.00070905	406.24746177753093	27.411	0.20351	27.452	27.277	27.48	0.040833	0.017753	0.00083874	NaN	20.837	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11667			66208	7573	43973	43991							0.12079296028127828
YAGKKRRLQP	10	Unmodified	_YAGKKRRLQP_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2;ENST00000574518.1_1_17:7674005-7689702:+|nuORF	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	406.247285	1215.72002	0.53654	0.00021797	0.34096	0.00013851	0.8775	0.00035648	406.24743976995705	27.595	0.61254	27.498	27.228	27.84	-0.096945	0.064463	-0.00042544	NaN	20.837	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89206			66209	7573	43973	43991							0.12079296028127828
YAGKKRRLQP	10	Unmodified	_YAGKKRRLQP_					0	0	0		ENSG00000183914|ENST00000572933|DNAH2;nc|ENSG00000183914|Q9P225-2|DNAH2;ENST00000574518.1_1_17:7674005-7689702:+|nuORF	ENSG00000183914|ENST00000572933|DNAH2	ENSG00000183914|ENST00000572933|DNAH2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	406.247285	1215.72002	1.1533	0.00046852	-0.24736	-0.00010049	0.90592	0.00036803	406.24721766117204	27.651	0.60501	27.396	27.115	27.72	-0.25465	-0.037842	-0.0011424	NaN	20.837	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53742			66210	7573	43973	43991							0.12079296028127828
YAGLHSHL	8	Unmodified	_YAGLHSHL_					0	0	0			REV__nc|ENSG00000188167|Q6ZT21-2|TMPPE	REV__nc|ENSG00000188167|Q6ZT21-2|TMPPE	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	449.231689453125	2	449.232502	896.450451	-1.619	-0.00072729	-2.5262	-0.0011349	-4.1452	-0.0018622	449.23133844286133	83.319	3.7519	83.457	82.118	85.87	0.13811					166	86	3	0	0	0	0.86791	1	8059	8059		28.254	1.4582	1	160270	+		66211	22984	43974	43992	75182	75182					-0.0019163758823879107
YAHLLVKIKE	10	Unmodified	_YAHLLVKIKE_					0	0	0			REV__ENSG00000218819|ENST00000405799|TDRD15	REV__ENSG00000218819|ENST00000405799|TDRD15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.2538146972656	3	405.248291	1212.72304	1.65	0.00066868	-4.4296	-0.0017951	-2.7795	-0.0011264	405.24639893952656	23.489	3.066	23.108	22.404	25.47	-0.38178					149	70	4	0	0	0	0.76096	1	1111	1111		41.427	0.34655	1	247320	+		66212	23699	43975	43993	75183	75183					0.12519126362258248
YAIAMELD	8	Unmodified	_YAIAMELD_					0	0	0			REV__ENSG00000043093|ENST00000292782|DCUN1D1	REV__ENSG00000043093|ENST00000292782|DCUN1D1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	462.25640869140625	2	463.220411	924.426269	-0.086506	-4.0071E-05	0.12684	5.8754E-05	0.040331	1.8682E-05	463.22052062233894	50.214	0.78319	50.661	50.143	50.926	0.44761					24	18	2	0	0	0	0.4196	1	4951	4951		26.796	0	1	265820	+		66213	16334	43976	43994	75184	75184					-0.03896658856785962
YAIEKVREI	9	Unmodified	_YAIEKVREI_					0	0	0		ENSG00000092439|ENST00000646667|TRPM7	ENSG00000092439|ENST00000646667|TRPM7	ENSG00000092439|ENST00000646667|TRPM7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.81982421875	2	560.821681	1119.62881	0.78776	0.00044179	-4.1287	-0.0023155	-3.341	-0.0018737	560.8192753742564	92.439	2.8901	92.598	91.192	94.082	0.15874					209	68	4	0	0	0	0.76255	1	9395	9395		35.618	0.46626	1	872010			66214	1699	43977	43995	75185	75185					0.07377987540144204
YAIGNAPEL	9	Unmodified	_YAIGNAPEL_					0	0	0		ENSG00000163930|ENST00000460680|BAP1	ENSG00000163930|ENST00000460680|BAP1	ENSG00000163930|ENST00000460680|BAP1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	474.2483215332031	2	474.245275	946.475997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.623	1	66.175	65.675	66.675	0.5526								0	0	0	0.39224	1	7153	7153		53.351	0.41475	1				66215	5883	43978	43996	75186	75186					0.0006179214351504925
YAIHQVVLPVL	11	Unmodified	_YAIHQVVLPVL_					0	0	0		nc|ENSG00000129317|Q9H0K6-2|PUS7L;ENSG00000129317|ENST00000344862|PUS7L	nc|ENSG00000129317|Q9H0K6-2|PUS7L	nc|ENSG00000129317|Q9H0K6-2|PUS7L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	417.92205810546875	3	417.920174	1250.73869	3.1807	0.0013293	1.9124	0.00079924	5.0931	0.0021285	417.9209605426618	105.73	2.7025	105.77	104.99	107.7	0.038322					262	63	6	0	0	0	0.71452	1	11480	11480		25.126	4.0938	1	23553000			66216	3583	43979	43997	75187	75187					0.123354128793153
YAIKIMNMIR	10	Unmodified	_YAIKIMNMIR_					0	0	0		ENST00000553618.1_1_14:67665960-67666731:+|nuORF	ENST00000553618.1_1_14:67665960-67666731:+|nuORF	ENST00000553618.1_1_14:67665960-67666731:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	418.76434326171875	3	418.235	1251.68317	1.0422	0.00043588	2.6465	0.0011069	3.6887	0.0015427	418.57000000251236	33.171	0.59158	33.382	33.102	33.694	0.21168					28	13	4	0	0	0	0.37624	1	2402	2402		53.089	20.05	1	129140			66217	13704	43980	43998	75188	75188					0.06739540095691154
YAILHGVSTA	10	Unmodified	_YAILHGVSTA_					0	0	0			REV__ENST00000576932.5_1_17:52978226-52990031:+|nuORF	REV__ENST00000576932.5_1_17:52978226-52990031:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.9705810546875	2	516.279649	1030.54475	0.91633	0.00047308	-2.9506	-0.0015233	-2.0342	-0.0010502	516.2780536832126	17.645	0.33461	17.163	16.944	17.279	-0.48256					14	7	3	0	0	0	0.37624	1	294	294		17.365	0	1	41203	+		66218	28998	43981	43999	75189	75189					0.030694564432451443
YAISKPDIL	9	Unmodified	_YAISKPDIL_					0	0	0		nc|ENSG00000204946|Q6ZMS7-1|ZNF783;ENSG00000204946|ENST00000434415|ZNF783	nc|ENSG00000204946|Q6ZMS7-1|ZNF783	nc|ENSG00000204946|Q6ZMS7-1|ZNF783	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	510.29119873046875	2	510.292225	1018.5699	0.40066	0.00020445	-0.55977	-0.00028565	-0.15911	-8.1194E-05	510.29177277605464	53.089	1.3705	53.703	52.95	54.321	0.61436					88	32	4	0	0	0	0.6204	1	5313	5313		45.972	3.108	1	3542700			66219	8500	43982	44000	75190	75190					0.061355112458159056
YAISKPEVL	9	Unmodified	_YAISKPEVL_					0	0	0		nc|ENSG00000181220|Q6NUN9|ZNF746;nc|ENSG00000181220|Q6NUN9-2|ZNF746;ENSG00000181220|ENST00000458143|ZNF746	nc|ENSG00000181220|Q6NUN9|ZNF746	nc|ENSG00000181220|Q6NUN9|ZNF746	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.290771484375	2	510.292225	1018.5699	0.26746	0.00013648	-0.4846	-0.00024729	-0.21715	-0.00011081	510.2918455179726	53.31	1.1574	53.724	52.92	54.077	0.4139					73	27	4	0	0	0	0.30689	1	5321	5321		64.207	0	1	3524900			66220	7376	43983	44001	75191	75191					0.061355112458159056
YAITNVFIKVD	11	Unmodified	_YAITNVFIKVD_					0	0	0			REV__ENSG00000205038|ENST00000378402|PKHD1L1	REV__ENSG00000205038|ENST00000378402|PKHD1L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8587646484375	2	641.855721	1281.69689	1.7061	0.001095	4.3829	0.0028132	6.089	0.0039082	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.70737	1	12935	12935		30.318	5.7985	1	27133000	+		66221	23536	43984	44002	75192	75192					0.06730812400110153
YAKTFRIDL	9	Unmodified	_YAKTFRIDL_					0	0	0			REV__ENST00000349830.7_1_8:1871659-1871701:+|nuORF	REV__ENST00000349830.7_1_8:1871659-1871701:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.814697265625	2	563.816399	1125.61824	-0.37723	-0.00021269	1.0092	0.00056903	0.63202	0.00035634	563.8171367706988	53.744	1.0641	53.72	53.305	54.369	-0.02475					38	26	2	0	0	0	0.76255	1	4783	4783		35.618	0	1	113200	+		66222	25336	43985	44003	75193	75193					0.060460048857066795
YAKTFRIDL	9	Unmodified	_YAKTFRIDL_					0	0	0			REV__ENST00000349830.7_1_8:1871659-1871701:+|nuORF	REV__ENST00000349830.7_1_8:1871659-1871701:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	564.3177490234375	2	563.816399	1125.61824	0.35972	0.00020282	0.50905	0.00028701	0.86878	0.00048983	563.8168428639851	53.745	1.0519	53.792	53.268	54.32	0.047802					46	35	2	0	0	0	0.78536	1	4420	4420		29.15	0	1	151030	+		66223	25336	43985	44003	75194	75194					0.060460048857066795
YALDLSTFL	9	Unmodified	_YALDLSTFL_					0	0	0		ENSG00000137331|ENST00000259874|IER3	ENSG00000137331|ENST00000259874|IER3	ENSG00000137331|ENST00000259874|IER3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	521.777099609375	2	521.776408	1041.53826	2.2085	0.0011523	-2.7102	-0.0014141	-0.50173	-0.00026179	521.7749538338597	102.58	0.31786	102.81	102.61	102.93	0.22556					17	8	3	0	0	0	0.10807	1	12462	12462		90.777	37.425	1	490220			66224	4190	43986	44004	75195	75195					0.019155184918417945
YALDLSTFL	9	Unmodified	_YALDLSTFL_					0	0	0		ENSG00000137331|ENST00000259874|IER3	ENSG00000137331|ENST00000259874|IER3	ENSG00000137331|ENST00000259874|IER3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.77734375	2	521.776408	1041.53826	3.0101	0.0015706	-3.4505	-0.0018004	-0.44032	-0.00022975	521.774548538426	102.6	0.32536	102.9	102.68	103.01	0.29865					11	7	2	0	0	0	0.10807	2	12500	12500;12511		90.777	37.425	1	592120			66225	4190	43986	44004	75196;75197	75196					0.019155184918417945
YALPHAIL	8	Unmodified	_YALPHAIL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000436287.1_1_1:224051789-224052101:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	449.26318359375	2	449.263271	896.511988	-0.14472	-6.5017E-05	0.4077	0.00018316	0.26298	0.00011815	449.26330087069084	65.276	1.0197	65.28	64.637	65.657	0.0046921					102	38	4	0	0	0	0.14033	8	6119	6097;6108;6119;6129;6137;6144;6154;6163		112.7	38.188	1	2300700			66226	1338	43987	44005	75198;75199;75200;75201;75202;75203;75204;75205	75200					0.05959294111039526
YALPHAIL	8	Unmodified	_YALPHAIL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000436287.1_1_1:224051789-224052101:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.2632141113281	2	449.263271	896.511988	-0.33425	-0.00015017	0.49308	0.00022152	0.15883	7.1357E-05	449.26334220475974	65.078	0.8138	65.044	64.648	65.462	-0.034798					96	31	4	0	0	0	0.026688	8	6225	6214;6225;6234;6240;6249;6256;6262;6268		131.47	44.538	1	2478600			66227	1338	43987	44005	75206;75207;75208;75209;75210;75211;75212;75213	75207					0.05959294111039526
YALPHAIL	8	Unmodified	_YALPHAIL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000436287.1_1_1:224051789-224052101:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	449.2630615234375	2	449.263271	896.511988	-0.15398	-6.9178E-05	0.25292	0.00011363	0.098943	4.4451E-05	449.263230485054	64.998	0.8704	65.025	64.593	65.464	0.027145					101	32	4	0	0	0	0.026688	8	6124	6115;6124;6134;6143;6151;6159;6168;6177		131.47	44.538	1	2532200			66228	1338	43987	44005	75214;75215;75216;75217;75218;75219;75220;75221	75215					0.05959294111039526
YALPHAIL	8	Unmodified	_YALPHAIL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000436287.1_1_1:224051789-224052101:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	449.2645568847656	2	449.263271	896.511988	-1.3193	-0.00059272	1.7248	0.00077487	0.40544	0.00018215	449.2640636896634	64.891	0.57627	65.016	64.799	65.375	0.12545					41	22	3	0	0	0	0.91333	1	5745	5745		43.626	1.1516	1	149160			66229	1338	43987	44005	75222	75222					0.05959294111039526
YALPHAIL	8	Unmodified	_YALPHAIL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000436287.1_1_1:224051789-224052101:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2638244628906	2	449.263271	896.511988	0.42959	0.000193	-0.063608	-2.8577E-05	0.36598	0.00016442	449.2632324319711	65.003	0.58553	65.129	64.767	65.353	0.12532					39	23	2	0	0	0	0.70106	1	5754	5754		67.327	15.028	1	150480			66230	1338	43987	44005	75223	75223					0.05959294111039526
YALPHAIL	8	Unmodified	_YALPHAIL_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000436287.1_1_1:224051789-224052101:-|nuORF	ENSG00000075624|ENST00000646664|ACTB	ENSG00000075624|ENST00000646664|ACTB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	449.263271	896.511988	-0.96681	-0.00043435	1.1822	0.00053112	0.21539	9.6769E-05	449.26368060305805	65.212	0.4866	65.25	64.856	65.342	0.037849	0.12605	0.00063301	NaN	131.47	31	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156400			66231	1338	43987	44005							0.05959294111039526
YAMSLTAS	8	Unmodified	_YAMSLTAS_					0	0	0			REV__nc|ENSG00000146701|P40926-2|MDH2	REV__nc|ENSG00000146701|P40926-2|MDH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	421.2539978027344	2	422.199479	842.384405	-1.7614	-0.00074368	0.55943	0.00023619	-1.202	-0.00050749	422.1995400637608	85.173	1.8446	85.358	84.241	86.085	0.18523					65	42	2	0	0	0	0.4196	1	8174	8174		28.254	15.295	1	196070	+		66232	20028	43988	44006	75224	75224					-0.04309214545310169
YANSKAVTL	9	Unmodified	_YANSKAVTL_					0	0	0		ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	ENSG00000164091|ENST00000296490|WDR82	ENSG00000164091|ENST00000296490|WDR82	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	483.7662658691406	2	483.766374	965.518196	0.69531	0.00033637	-0.88906	-0.0004301	-0.19375	-9.3728E-05	483.76581809464744	36.669	1.5126	36.951	36.511	38.024	0.28173					107	36	4	0	0	0	6.2809E-39	9	2902	2852;2864;2878;2890;2902;2914;2925;2937;2956		195.06	97.964	1	2802300			66233	5916	43989	44007	75225;75226;75227;75228;75229;75230;75231;75232;75233	75229					0.03405767551907957
YANSKAVTL	9	Unmodified	_YANSKAVTL_					0	0	0		ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF	ENSG00000164091|ENST00000296490|WDR82	ENSG00000164091|ENST00000296490|WDR82	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7664489746094	2	483.766374	965.518196	0.97423	0.0004713	-1.1379	-0.0005505	-0.16371	-7.9197E-05	483.7657260263806	36.398	1.8576	36.839	36.573	38.431	0.44043					114	45	4	0	0	0	9.502000000000001E-29	8	2857	2857;2869;2882;2894;2906;2918;2930;2942		185.55	86.175	1	2927300			66234	5916	43989	44007	75234;75235;75236;75237;75238;75239;75240;75241	75234					0.03405767551907957
YANYRHLY	8	Unmodified	_YANYRHLY_					0	0	0			REV__nc|ENSG00000118707|Q9GZN2-2|TGIF2	REV__nc|ENSG00000118707|Q9GZN2-2|TGIF2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	550.609619140625	2	550.269616	1098.52468	0.18283	0.00010061	-0.97419	-0.00053607	-0.79135	-0.00043546	550.269036992345	66.743	0.46818	66.876	66.676	67.144	0.13326					32	20	2	0	0	0	0.89457	1	5925	5925		37.028	1.8278	1	124660	+		66235	15773	43990	44008	75242	75242					-0.02064294496722141
YARDAFVGVC	10	Unmodified	_YARDAFVGVC_					0	0	0			REV__nc|ENSG00000140279|Q9NRD8|DUOX2	REV__nc|ENSG00000140279|Q9NRD8|DUOX2	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	550.7661743164062	2	550.763309	1099.51206	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.523	1	29.48	28.98	29.98	-0.043095								0	0	0	0.45132	1	1548	1548		47.657	7.0847	1		+		66236	19604	43991	44009	75243	75243					-0.03371073951257131
YASHIVQHE	9	Unmodified	_YASHIVQHE_					0	0	0		nc|ENSG00000189144|Q86YE8-2|ZNF573;nc|ENSG00000189144|Q86YE8-4|ZNF573;nc|ENSG00000189144|Q86YE8-3|ZNF573;ENSG00000189144|ENST00000536220|ZNF573	nc|ENSG00000189144|Q86YE8-2|ZNF573	nc|ENSG00000189144|Q86YE8-2|ZNF573	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	542.7645263671875	2	542.26453	1082.51451	-0.026481	-1.436E-05	0.083523	4.5291E-05	0.057042	3.0932E-05	542.2645240320868	47.375	0.45829	47.366	47.116	47.574	-0.0093269					19	12	3	0	0	0	0.58668	1	3849	3849		47.657	7.0847	1	126710			66237	7994	43992	44010	75244	75244					-0.023449022219665494
YASHIVQHE	9	Unmodified	_YASHIVQHE_					0	0	0		nc|ENSG00000189144|Q86YE8-2|ZNF573;nc|ENSG00000189144|Q86YE8-4|ZNF573;nc|ENSG00000189144|Q86YE8-3|ZNF573;ENSG00000189144|ENST00000536220|ZNF573	nc|ENSG00000189144|Q86YE8-2|ZNF573	nc|ENSG00000189144|Q86YE8-2|ZNF573	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	542.26453	1082.51451	0.058342	3.1637E-05	-0.16762	-9.0893E-05	-0.10928	-5.9256E-05	542.264299868386	47.25	0.37942	47.224	46.984	47.363	-0.026737	-0.067428	3.2338E-05	NaN	47.657	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114630			66238	7994	43992	44010							-0.023449022219665494
YASHIVQHE	9	Unmodified	_YASHIVQHE_					0	0	0		nc|ENSG00000189144|Q86YE8-2|ZNF573;nc|ENSG00000189144|Q86YE8-4|ZNF573;nc|ENSG00000189144|Q86YE8-3|ZNF573;ENSG00000189144|ENST00000536220|ZNF573	nc|ENSG00000189144|Q86YE8-2|ZNF573	nc|ENSG00000189144|Q86YE8-2|ZNF573	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	542.26453	1082.51451	0.43286	0.00023472	-0.57741	-0.00031311	-0.14456	-7.8387E-05	542.2641609757179	47.288	0.4373	47.284	47.058	47.496	-0.0041618	-0.007498	-0.00041209	NaN	47.657	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96168			66239	7994	43992	44010							-0.023449022219665494
YASSKPDEP	9	Unmodified	_YASSKPDEP_					0	0	0			REV__ENSG00000085465|ENST00000369732|OVGP1	REV__ENSG00000085465|ENST00000369732|OVGP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	497.7955322265625	2	497.229822	992.445091	-0.98634	-0.00049044	0.25148	0.00012504	-0.73486	-0.0003654	497.2297250366229	46.14	0.36366	47.045	46.892	47.255	0.90505					14	8	2	0	0	0	0.20789	1	4349	4349		40.778	9.2484	1	194550	+		66240	16890	43993	44011	75245	75245					-0.05143405961382541
YATEVDVDF	9	Unmodified	_YATEVDVDF_					0	0	0		nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;ENSG00000006125|ENST00000610402|AP2B1	nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1	nc|ENSG00000100280|Q10567-3|AP1B1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7802124023438	2	529.73748	1057.46041	0.54189	0.00028706	-2.6083	-0.0013817	-2.0664	-0.0010947	530.2352996281786	51.694	0.54716	52.129	51.74	52.288	0.43505					17	12	2	0	0	0	0.20789	1	5144	5144		30.504	1.3541	1	85398			66241	1817;695	43994	44012	75246	75246					-0.06602539164191512
YATEVDVDF	9	Unmodified	_YATEVDVDF_					0	0	0		nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;ENSG00000006125|ENST00000610402|AP2B1	nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1	nc|ENSG00000100280|Q10567-3|AP1B1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	529.73748	1057.46041	0.052232	2.7669E-05	-8.8762	-0.004702	-8.8239	-0.0046744	529.732088982211	52.074	0.4148	52.072	51.833	52.248	-0.0020447	0.0028528	-0.0024664	NaN	30.504	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42726			66242	1817;695	43994	44012							-0.06602539164191512
YATEVDVDF	9	Unmodified	_YATEVDVDF_					0	0	0		nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;ENSG00000006125|ENST00000610402|AP2B1	nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1	nc|ENSG00000100280|Q10567-3|AP1B1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	529.73748	1057.46041	-0.1367	-7.2413E-05	-9.3466	-0.0049512	-9.4833	-0.0050236	529.7325722837896	52.029	0.58989	52.006	51.781	52.371	-0.02343	-0.063441	-0.0029648	NaN	30.504	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44649			66243	1817;695	43994	44012							-0.06602539164191512
YATEVDVDF	9	Unmodified	_YATEVDVDF_					0	0	0		nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;ENSG00000006125|ENST00000610402|AP2B1	nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1	nc|ENSG00000100280|Q10567-3|AP1B1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	529.73748	1057.46041	0.28519	0.00015108	-9.7838	-0.0051828	-9.4986	-0.0050318	529.7318238465234	52.057	0.51051	52.069	51.884	52.395	0.012436	0.00044057	-0.003428	NaN	30.504	20	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90056			66244	1817;695	43994	44012							-0.06602539164191512
YATIILSKMML	11	Unmodified	_YATIILSKMML_					0	0	0		nc|ENSG00000008394|P10620-2|MGST1;ENST00000537878.5_1_12:16500588-16507345:+|nuORF;ENST00000539708.5_1_12:16507186-16513330:+|nuORF;ENST00000539036.5_1_12:16500588-16536519:+|nuORF;ENST00000538857.1_1_12:16507186-16536519:+|nuORF;ENSG00000008394|ENST00000396210|MGST1	nc|ENSG00000008394|P10620-2|MGST1;ENSG00000008394|ENST00000396210|MGST1	ENSG00000008394|ENST00000396210|MGST1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.36376953125	2	642.358727	1282.7029	1.6043	0.0010305	4.3924	0.0028215	5.9967	0.003852	642.3621659530644	110.8	0.90775	110.92	110.61	111.52	0.11658					128	36	4	0	0	0	0.6921	1	11951	11951		32.812	1.2826	1	486380			66245	14736;746	43995	44013	75247	75247					0.07285871315798431
YATRLRRAGG	10	Unmodified	_YATRLRRAGG_					0	0	0			REV__ENSG00000173917|ENST00000330070|HOXB2	REV__ENSG00000173917|ENST00000330070|HOXB2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8198852539062	2	560.820338	1119.62612	-0.54677	-0.00030664	-0.43561	-0.0002443	-0.98237	-0.00055094	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.80179	1	9045	9045		39.253	6.4404	1	408930	+		66246	21963	43996	44014	75248	75248					0.07109576925836336
YAVEGRDLTL	10	Unmodified	_YAVEGRDLTL_					0	0	0		ENST00000532074.5_1_1:155984857-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENST00000472898.5_1_1:155981561-155990687:-|nuORF;ENSG00000163479|ENST00000295702|SSR2	ENST00000532074.5_1_1:155984857-155990687:-|nuORF	ENST00000532074.5_1_1:155984857-155990687:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	568.8014526367188	2	568.800946	1135.58734	-0.98347	-0.0005594	1.0516	0.00059813	0.068086	3.8728E-05	568.8013949163791	58.059	0.65662	58.453	58.081	58.738	0.39407					40	15	4	0	0	0	0.0013146	3	6055	6055;6067;6080		138.06	69.276	1	1541500			66247	5803	43997	44015	75249;75250;75251	75249					0.02496806780800398
YAVEGRDLTL	10	Unmodified	_YAVEGRDLTL_					0	0	0		ENST00000532074.5_1_1:155984857-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENST00000472898.5_1_1:155981561-155990687:-|nuORF;ENSG00000163479|ENST00000295702|SSR2	ENST00000532074.5_1_1:155984857-155990687:-|nuORF	ENST00000532074.5_1_1:155984857-155990687:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.8007202148438	2	568.800946	1135.58734	1.1634	0.00066175	-1.1615	-0.00066064	0.0019441	1.1058E-06	568.7999624316195	57.938	0.771	58.491	58.151	58.922	0.55323					50	18	4	0	0	0	0.0013146	3	6066	6057;6066;6080		138.06	53.147	1	1914600			66248	5803	43997	44015	75252;75253;75254	75253					0.02496806780800398
YAYDGKDYLAL	11	Unmodified	_YAYDGKDYLAL_					0	0	0		nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G;ENSG00000204632|ENST00000360323|HLA-G	nc|ENSG00000204632|P17693-4|HLA-G	nc|ENSG00000204632|P17693-4|HLA-G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	646.8159790039062	2	646.313886	1290.61322	0.059114	3.8207E-05	0.13487	8.7168E-05	0.19398	0.00012537	646.3137994975637	65.71	0.77345	66.095	65.849	66.623	0.38582					51	20	3	0	0	0	0.13035	4	7129	7129;7134;7145;7157		85.862	0	1	1937000			66249	8472	43998	44016	75255;75256;75257;75258	75255					-0.020463437675516616
YAYDGKDYLAL	11	Unmodified	_YAYDGKDYLAL_					0	0	0		nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G;ENSG00000204632|ENST00000360323|HLA-G	nc|ENSG00000204632|P17693-4|HLA-G	nc|ENSG00000204632|P17693-4|HLA-G	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	646.3148803710938	2	646.313886	1290.61322	1.6185	0.0010461	-1.5067	-0.00097381	0.11178	7.2247E-05	646.3126890190069	65.59	0.7719	66.143	65.869	66.641	0.5526					54	21	4	0	0	0	0.05374	4	7156	7135;7145;7156;7166		101.46	0	1	2309700			66250	8472	43998	44016	75259;75260;75261;75262	75261					-0.020463437675516616
YCAYVFGVL	9	Unmodified	_YCAYVFGVL_					0	0	0			REV__nc|ENSG00000185942|Q8N8D7|NKAIN3	REV__nc|ENSG00000185942|Q8N8D7|NKAIN3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.7565307617188	2	517.754421	1033.49429	-0.43157	-0.00022345	-1.2669	-0.00065595	-1.6985	-0.00087939	517.7535867827911	61	1.1143	61.39	60.753	61.867	0.38945					51	33	2	0	0	0	0.36201	1	6460	6460		60.404	7.4669	1	958090	+		66251	22808	43999	44017	75263	75263					-0.02111789206105641
YCCCYCSSKGY	11	Unmodified	_YCCCYCSSKGY_					0	0	0		chr10:63599283-63619655|37|14.11|0.63|4.48|+|2|REEP3,REEP3|1	chr10:63599283-63619655|37|14.11|0.63|4.48|+|2|REEP3,REEP3|1	chr10:63599283-63619655|37|14.11|0.63|4.48|+|2|REEP3,REEP3|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.2177734375	2	640.216162	1278.41777	-0.071786	-4.5959E-05	3.0143	0.0019298	2.9425	0.0018839	640.2177573110653	75.448	0.65024	75.494	75.238	75.889	0.045959					47	19	3	0	0	0	0.64498	1	7267	7267		39.253	3.6345	1	279790			66252	79	44000	44018	75264	75264					-0.2103004015159513
YCCCYCSSKGY	11	Unmodified	_YCCCYCSSKGY_					0	0	0		chr10:63599283-63619655|37|14.11|0.63|4.48|+|2|REEP3,REEP3|1	chr10:63599283-63619655|37|14.11|0.63|4.48|+|2|REEP3,REEP3|1	chr10:63599283-63619655|37|14.11|0.63|4.48|+|2|REEP3,REEP3|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.2185668945312	2	640.216162	1278.41777	1.5374	0.00098429	1.3014	0.00083319	2.8388	0.0018175	640.2167752798688	75.306	0.57291	75.432	75.135	75.708	0.12545					35	14	3	0	0	0	0.62614	1	6994	6994		41.427	9.8968	1	279360			66253	79	44000	44018	75265	75265					-0.2103004015159513
YCCCYCSSKGY	11	Unmodified	_YCCCYCSSKGY_					0	0	0		chr10:63599283-63619655|37|14.11|0.63|4.48|+|2|REEP3,REEP3|1	chr10:63599283-63619655|37|14.11|0.63|4.48|+|2|REEP3,REEP3|1	chr10:63599283-63619655|37|14.11|0.63|4.48|+|2|REEP3,REEP3|1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.216796875	2	640.216162	1278.41777	0.70933	0.00045413	2.0909	0.0013386	2.8002	0.0017927	640.2172408703576	75.268	0.60891	75.4	75.11	75.719	0.13208					43	16	3	0	0	0	0.60058	1	6988	6988		44.377	0.26039	1	301020			66254	79	44000	44018	75266	75266					-0.2103004015159513
YCGRIKKKK	9	Unmodified	_YCGRIKKKK_					0	0	0		RPS4X-SINHCAFP3|1|chrX_72272608_-,chr8_23635296_-|13.0|0.0|0.1009|2|2|fusion	RPS4X-SINHCAFP3|1|chrX_72272608_-,chr8_23635296_-|13.0|0.0|0.1009|2|2|fusion	RPS4X-SINHCAFP3|1|chrX_72272608_-,chr8_23635296_-|13.0|0.0|0.1009|2|2|fusion	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	562.343994140625	2	562.342061	1122.66957	0.77293	0.00043465	1.9975	0.0011233	2.7704	0.0015579	562.3430494101636	90.476	3.0468	90.629	89.657	92.704	0.15388					171	72	3	0	0	0	0.7932	1	9041	9041		23.042	0.46283	1	591570			66255	30336	44001	44019	75267	75267					0.11314050378769025
YCLERRLY	8	Unmodified	_YCLERRLY_					0	0	0		nc|ENSG00000166090|Q9H293-2|IL25;ENSG00000166090|ENST00000329715|IL25	nc|ENSG00000166090|Q9H293-2|IL25	nc|ENSG00000166090|Q9H293-2|IL25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	558.2852783203125	2	558.286951	1114.55935	-0.97789	-0.00054595	-3.1837	-0.0017774	-4.1616	-0.0023234	558.2847818887834	75.353	0.69984	75.44	75.146	75.846	0.087631					35	17	3	0	0	0	0.91472	1	6975	6975		44.117	3.3386	1	171770			66256	6154	44002	44020	75268	75268					0.0066520531975129416
YCLFIQSM	8	Carbamidomethyl (C),Oxidation (M)	_YC(Carbamidomethyl (C))LFIQSM(Oxidation (M))_	YC(1)LFIQSM	YCLFIQSM(1)	YC(77)LFIQSM	YCLFIQSM(77)	0	1	1			REV__ENST00000276440.11_1_8:25270087-25270417:+|nuORF	REV__ENST00000276440.11_1_8:25270087-25270417:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.2445678710938	2	539.240821	1076.46709	0.82613	0.00044549	1.8665	0.0010065	2.6927	0.001452	539.2416577167436	61.906	0.75049	61.873	61.511	62.261	-0.033169					56	28	3	0	0	0	0.47906	1	5832	5832		76.847	15.875	1	574740	+		66257	24580	44003	44021	75269	75269	301	383			-0.06808640808799282
YCLGGYHGASH	11	Unmodified	_YCLGGYHGASH_					0	0	0		ENSG00000183779|ENST00000331569|ZNF703	ENSG00000183779|ENST00000331569|ZNF703	ENSG00000183779|ENST00000331569|ZNF703	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.2518310546875	2	582.74819	1163.48183	0.099643	5.8067E-05	2.1531	0.0012547	2.2527	0.0013128	583.2508992678203	24.933	0.5084	24.89	24.641	25.15	-0.043633					18	11	2	0	0	0	0.63176	1	1014	1014		40.778	12.896	1	39260			66258	7561	44004	44022	75270	75270					-0.09337432616462138
YCLLTVFIPKT	11	Unmodified	_YCLLTVFIPKT_					0	0	0			REV__ENST00000352035.6_1_17:40023784-40023979:-|nuORF	REV__ENST00000352035.6_1_17:40023784-40023979:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	649.364501953125	2	649.364867	1296.71518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.41	1	65.448	64.948	65.948	0.037849								0	0	0	0.56276	1	5806	5806		35.152	0	1		+		66259	25343	44005	44023	75271	75271					0.07869231050472081
YCLSVIIFFFV	11	Unmodified	_YCLSVIIFFFV_					0	0	0		nc|ENSG00000125107|A5YKK6-4|CNOT1	nc|ENSG00000125107|A5YKK6-4|CNOT1	nc|ENSG00000125107|A5YKK6-4|CNOT1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	450.2742919921875	3	450.910399	1349.70937	1.2866	0.00058013	1.279	0.00057673	2.5656	0.0011569	451.2448603293614	92.839	0.24217	92.884	92.795	93.038	0.045456					8	5	2	0	0	0	0.17811	1	9713	9713		26.063	8.2302	1	39994			66260	14891	44006	44024	75272	75272					0.048501325388087935
YCRRLTKI	8	Unmodified	_YCRRLTKI_					0	0	0			REV__ENSG00000120458|ENST00000374979|MSANTD2	REV__ENSG00000120458|ENST00000374979|MSANTD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	527.3076782226562	2	526.805311	1051.59607	3.1222	0.0016448	2.0164	0.0010623	5.1386	0.002707	526.8062549875466	101.13	2.204	101.08	100.09	102.29	-0.052116					131	51	4	0	0	0	0.88915	1	10957	10957		35.201	3.2459	1	2494300	+		66261	18413	44007	44025	75273	75273					0.07233501936275388
YCSMPPWICHS	11	Unmodified	_YCSMPPWICHS_					0	0	0			REV__ENST00000601106.1_1_19:19051348-19057032:+|nuORF	REV__ENST00000601106.1_1_19:19051348-19057032:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	441.7882080078125	3	441.848817	1322.52462	0.054415	2.4043E-05	2.0472	0.00090455	2.1016	0.0009286	441.8488831275543	38.05	0.23862	38.572	38.434	38.672	0.52235					6	5	2	0	0	0	0.17243	1	3115	3115		28.577	13.244	1	44578	+		66262	29316	44008	44026	75274	75274					-0.12374121874881894
YCVVPSAS	8	Unmodified	_YCVVPSAS_					0	0	0			REV__nc|ENSG00000163430|Q12841-2|FSTL1	REV__nc|ENSG00000163430|Q12841-2|FSTL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.1939697265625	2	413.194196	824.37384	0.80605	0.00033306	-2.5244	-0.0010431	-1.7183	-0.00071	413.1932379055747	78.047	2.9824	78.452	77.977	80.959	0.4053					181	70	5	0	0	0	0.86791	1	8942	8942		28.254	0	1	5554900	+		66263	20914	44009	44027	75275	75275					-0.0453719719973833
YCWLKSRRILR	11	Unmodified	_YCWLKSRRILR_					0	0	0			REV__ENSG00000273604|ENST00000621654|EPOP	REV__ENSG00000273604|ENST00000621654|EPOP	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.9587707519531	3	498.622246	1492.84491	-0.24645	-0.00012288	1.952	0.00097329	1.7055	0.00085041	498.62308144457916	21.663	1.0696	21.599	21.115	22.184	-0.064743					82	38	3	0	0	0	0.78391	1	691	691		14.694	3.0577	1	61443	+		66264	23991	44010	44028	75276	75276					0.11819845172999521
YCYLNPGH	8	Unmodified	_YCYLNPGH_					0	0	0			REV__ENSG00000110169|ENST00000265983|HPX	REV__ENSG00000110169|ENST00000265983|HPX	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	483.7102355957031	2	483.710545	965.406537	-1.5527	-0.00075105	1.4649	0.00070861	-0.087752	-4.2446E-05	483.7111737968188	88.543	1.0415	89.014	88.68	89.721	0.47068					38	25	2	0	0	0	0.90024	1	10470	10470		39.021	1.8624	1	1594900	+		66265	17800	44011	44029	75277	75277					-0.07754990076887225
YDDDRDTNVY	10	Unmodified	_YDDDRDTNVY_					0	0	0			REV__ENST00000488355.1_1_6:169617703-169623454:-|nuORF	REV__ENST00000488355.1_1_6:169617703-169623454:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	638.2605590820312	2	638.259839	1274.50512	-0.29465	-0.00018807	1.1331	0.00072324	0.83849	0.00053517	638.2604750318156	81.882	0.60325	81.882	81.616	82.22	0					47	16	4	0	0	0	0.8608	1	7624	7624		34.173	1.3601	1	334960	+		66266	22846	44012	44030	75278	75278					-0.12114760088797993
YDFGPISPT	9	Unmodified	_YDFGPISPT_					0	0	0			REV__nc|ENSG00000182504|Q8IW35-2|CEP97	REV__nc|ENSG00000182504|Q8IW35-2|CEP97	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	498.7365417480469	2	498.737283	995.460012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.785	1	20.853	20.353	21.353	0.068251								0	0	0	0.28386	1	514	514		37.159	0	1		+		66267	22528	44013	44031	75279	75279					-0.03789914093374591
YDIGVGSV	8	Unmodified	_YDIGVGSV_					0	0	0			REV__ENST00000541990.5_1_1:155170782-155174851:-|nuORF	REV__ENST00000541990.5_1_1:155170782-155174851:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.2041320800781	2	405.205618	808.396684	-0.0495	-2.0058E-05	-2.1856	-0.00088563	-2.2351	-0.00090569	405.2046766008155	77.817	2.9644	77.766	76.941	79.906	-0.050797					195	102	3	0	0	0	0.86791	1	7786	7786		28.254	1.4582	1	162370	+		66268	28492	44014	44032	75280	75280					-0.015178548106064227
YDIPLNPLN	9	Unmodified	_YDIPLNPLN_					0	0	0		nc|ENSG00000052802|Q15800-2|MSMO1;ENSG00000052802|ENST00000261507|MSMO1	nc|ENSG00000052802|Q15800-2|MSMO1	nc|ENSG00000052802|Q15800-2|MSMO1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	529.780029296875	2	529.779482	1057.54441	-0.036677	-1.9431E-05	-0.02852	-1.5109E-05	-0.065197	-3.454E-05	529.7793029461789	64.6	1.1094	64.603	64.064	65.173	0.0021362					72	32	4	0	0	0	0.74721	1	6025	6025		37.159	0.71236	1	265940			66269	1005	44015	44033	75281	75281					0.017940367233904908
YDKRYIIKT	9	Unmodified	_YDKRYIIKT_					0	0	0		ENST00000422321.5_1_10:22856588-22898637:-|nuORF;nc|ENSG00000150867|P48426-2|PIP4K2A;ENSG00000150867|ENST00000376573|PIP4K2A	ENST00000422321.5_1_10:22856588-22898637:-|nuORF	ENST00000422321.5_1_10:22856588-22898637:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	600.3422241210938	2	600.342781	1198.67101	0.81323	0.00048821	-2.0965	-0.0012586	-1.2833	-0.0007704	600.3418453410363	28.72	1.262	28.742	28.537	29.799	0.021946					73	63	2	0	0	0	0.7932	1	1182	1182		24.519	1.4767	1	91204			66270	11479	44016	44034	75282	75282					0.07961962948502332
YDLDSCKH	8	Unmodified	_YDLDSCKH_					0	0	0		ENST00000599923.5_1_19:50922219-50925807:+|nuORF;ENST00000594188.1_1_19:50922219-50926375:+|nuORF;nc|ENSG00000269404|Q01892-2|SPIB;ENSG00000269404|ENST00000595883|SPIB	ENST00000599923.5_1_19:50922219-50925807:+|nuORF	ENST00000599923.5_1_19:50922219-50925807:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	490.7137451171875	2	490.710742	979.406931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.166	1	99.528	99.028	100.03	0.36292								0	0	0	0.30609	1	12009	12009		44.531	0	1				66271	8969	44017	44035	75283	75283					-0.08359615147685417
YDLYGGDSH	9	Unmodified	_YDLYGGDSH_					0	0	0			REV__ENSG00000089060|ENST00000680972|SLC8B1	REV__ENSG00000089060|ENST00000680972|SLC8B1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	512.8106079101562	2	513.711796	1025.40904	1.5711	0.00080708	1.7927	0.00092092	3.3638	0.001728	513.7125090885868	27.671	0.73074	27.416	27.078	27.809	-0.25465					37	16	3	0	0	0	0.20789	1	1669	1669		40.573	8.6178	1	215900	+		66272	16959	44018	44036	75284	75284					-0.10264863138218061
YDMESVLRH	9	Unmodified	_YDMESVLRH_					0	0	0		ENSG00000170542|ENST00000380698|SERPINB9	ENSG00000170542|ENST00000380698|SERPINB9	ENSG00000170542|ENST00000380698|SERPINB9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.265869140625	2	575.271498	1148.52844	-0.2653	-0.00015262	-3.568	-0.0020526	-3.8333	-0.0022052	575.2692112596873	74.127	0.67583	74.686	74.326	75.002	0.55891					42	15	3	0	0	0	0.62081	1	8379	8379		45.952	13.14	1	632200			66273	6600	44019	44037	75285	75285					-0.03987992785141614
YDQLAEHLL	9	Unmodified	_YDQLAEHLL_					0	0	0			REV__nc|ENSG00000119715|O95718|ESRRB	REV__nc|ENSG00000119715|O95718|ESRRB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.2838134765625	2	551.282389	1100.55022	-0.54372	-0.00029974	3.3342	0.0018381	2.7905	0.0015383	551.2841438551218	60.462	1.0039	60.493	59.99	60.994	0.0312					66	29	3	0	0	0	0.55097	1	5633	5633		49.442	3.4896	1	112160	+		66274	15608	44020	44038	75286	75286					0.003971352350617963
YDTLDRRRKKK	11	Unmodified	_YDTLDRRRKKK_					0	0	0		ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	ENSG00000198722|ENST00000635942|UNC13B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	493.9541320800781	3	493.623191	1477.84774	-1.8007	-0.00088885	-2.5964	-0.0012816	-4.397	-0.0021705	493.6218802691259	31.167	0.9176	31.167	30.72	31.638	0					75	31	3	0	0	0	0.7896	1	1479	1479		13.508	1.0751	1	50794			66275	8315	44021	44039	75287	75287					0.12793391831473855
YDYTQRGDLRK	11	Unmodified	_YDYTQRGDLRK_					0	0	0			REV__ENST00000509980.5_1_4:122722579-122736524:+|nuORF	REV__ENST00000509980.5_1_4:122722579-122736524:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.5740661621094	3	472.240635	1413.70008	0.82189	0.00038813	-3.7819	-0.0017859	-2.96	-0.0013978	472.2388366283608	27.304	0.34069	27.049	26.855	27.196	-0.25465					14	7	3	0	0	0	0.72374	1	1576	1576		27.644	2.5761	1	162850	+		66276	18549	44022	44040	75288	75288					0.009774555068361224
YECYRLRKI	9	Unmodified	_YECYRLRKI_					0	0	0			REV__nc|ENSG00000145016|Q92622-3|RUBCN	REV__nc|ENSG00000145016|Q92622-3|RUBCN	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	622.3364868164062	2	622.334433	1242.65431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.38	1	111.42	110.92	111.92	0.041832								0	0	0	0.32469	1	13475	13475		21.96	3.6978	1		+		66277	19922	44023	44041	75289	75289					0.042691387909144396
YEDISRGL	8	Unmodified	_YEDISRGL_					0	0	0		nc|ENSG00000105369|P11912-2|CD79A;ENSG00000105369|ENST00000221972|CD79A	nc|ENSG00000105369|P11912-2|CD79A	nc|ENSG00000105369|P11912-2|CD79A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	476.73992919921875	2	476.740357	951.46616	-0.22107	-0.00010539	-0.22063	-0.00010518	-0.4417	-0.00021058	476.7401313491909	45.277	0.73496	45.74	45.47	46.205	0.46313					39	17	3	0	0	0	0.46912	3	4201	4191;4201;4222		77.318	14.339	1	2019100			66278	2209	44024	44042	75290;75291;75292	75291					-0.011513958618365905
YEDISRGL	8	Unmodified	_YEDISRGL_					0	0	0		nc|ENSG00000105369|P11912-2|CD79A;ENSG00000105369|ENST00000221972|CD79A	nc|ENSG00000105369|P11912-2|CD79A	nc|ENSG00000105369|P11912-2|CD79A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	476.7403869628906	2	476.740357	951.46616	-1.8107	-0.00086323	1.2617	0.00060149	-0.54903	-0.00026175	476.7408523811174	45.048	0.8908	45.893	45.625	46.516	0.84438					44	21	3	0	0	0	0.46912	4	4185	4175;4185;4197;4210		77.318	14.339	1	1765700			66279	2209	44024	44042	75293;75294;75295;75296	75294					-0.011513958618365905
YEDLKAQS	8	Unmodified	_YEDLKAQS_					0	0	0		nc|ENSG00000160299|O95613-2|PCNT;ENSG00000160299|ENST00000359568|PCNT	nc|ENSG00000160299|O95613-2|PCNT	nc|ENSG00000160299|O95613-2|PCNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	477.2326354980469	2	477.232364	952.450176	-0.2587	-0.00012346	0.35851	0.00017109	0.099808	4.7632E-05	477.232447667366	27.666	0.52666	27.627	27.305	27.832	-0.038523					29	12	3	0	0	0	0.93259	1	1335	1335		51.193	0	1	76144			66280	5577	44025	44043	75297	75297					-0.027951020987529773
YEEDSKETL	9	Unmodified	_YEEDSKETL_					0	0	0		ENSG00000038219|ENST00000040738|BOD1L1	ENSG00000038219|ENST00000040738|BOD1L1	ENSG00000038219|ENST00000040738|BOD1L1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	557.25048828125	2	557.250951	1112.48735	1.0313	0.0005747	-1.2507	-0.00069695	-0.21938	-0.00012225	557.250069127819	33.936	0.49485	34.241	34.035	34.53	0.30495					23	11	3	0	0	0	0.26953	1	2501	2501		67.494	24.629	1	358820			66281	913	44026	44044	75298	75298					-0.06439475343631784
YEEDSKETL	9	Unmodified	_YEEDSKETL_					0	0	0		ENSG00000038219|ENST00000040738|BOD1L1	ENSG00000038219|ENST00000040738|BOD1L1	ENSG00000038219|ENST00000040738|BOD1L1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	557.250951	1112.48735	0.8389	0.00046748	-0.92892	-0.00051764	-0.090017	-5.0162E-05	557.2503787016902	33.979	0.49865	34.189	33.942	34.441	0.21003	-0.026091	0.00018045	NaN	67.494	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	326240			66282	913	44026	44044							-0.06439475343631784
YEEFRKMWDYF	11	Unmodified	_YEEFRKMWDYF_					0	0	0		ENSG00000154269|ENST00000357639|ENPP3	ENSG00000154269|ENST00000357639|ENPP3	ENSG00000154269|ENST00000357639|ENPP3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3267822265625	3	538.574627	1612.70205	1.2457	0.00067092	-0.2874	-0.00015479	0.95832	0.00051613	538.9084730612124	100.85	0.11929	100.9	100.82	100.94	0.046356					4	2	2	0	0	0	0.18364	1	10846	10846		6.6596	0.96083	1	50152			66283	5271	44027	44045	75299	75299					-0.07979251799565645
YEEILNTKL	9	Unmodified	_YEEILNTKL_					0	0	0		ENSG00000135334|ENST00000257787|AKIRIN2	ENSG00000135334|ENST00000257787|AKIRIN2	ENSG00000135334|ENST00000257787|AKIRIN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.806884765625	2	561.805697	1121.59684	-0.54897	-0.00030842	0.63706	0.0003579	0.088087	4.9488E-05	561.8056231294319	58.069	0.65788	58.463	58.158	58.816	0.39407					23	15	2	0	0	0	3.4203E-05	3	6070	6064;6070;6079		152.06	41.082	1	1460200			66284	4007	44028	44046	75300;75301;75302	75301					0.04090575066334168
YEEILNTKL	9	Unmodified	_YEEILNTKL_					0	0	0		ENSG00000135334|ENST00000257787|AKIRIN2	ENSG00000135334|ENST00000257787|AKIRIN2	ENSG00000135334|ENST00000257787|AKIRIN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.8071899414062	2	561.805697	1121.59684	0.57188	0.00032128	0.19676	0.00011054	0.76864	0.00043182	561.8049097083237	57.988	1.2557	58.541	58.001	59.257	0.55323					49	30	3	0	0	0	0.022958	3	6079	6064;6068;6079		123.21	38.047	1	1457800			66285	4007	44028	44046	75303;75304;75305	75305					0.04090575066334168
YEELVRMVL	9	Oxidation (M)	_YEELVRM(Oxidation (M))VL_		YEELVRM(1)VL		YEELVRM(51)VL	0	0	1		nc|ENSG00000092841|P60660-2|MYL6	nc|ENSG00000092841|P60660-2|MYL6	nc|ENSG00000092841|P60660-2|MYL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	584.3088989257812	2	584.307549	1166.60055	-1.6674	-0.00097427	1.7281	0.0010098	0.060732	3.5486E-05	584.3083478172985	61.598	1.3644	61.986	61.561	62.925	0.38846					74	31	3	0	0	0	0.51592	3	6568	6558;6568;6593		51.193	15.364	1	507390			66286	14801	44029	44047	75306;75307;75308	75307		211			0.023909215685534946
YEELVRMVL	9	Oxidation (M)	_YEELVRM(Oxidation (M))VL_		YEELVRM(1)VL		YEELVRM(75)VL	0	0	1		nc|ENSG00000092841|P60660-2|MYL6	nc|ENSG00000092841|P60660-2|MYL6	nc|ENSG00000092841|P60660-2|MYL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	584.3084716796875	2	584.307549	1166.60055	-0.51202	-0.00029918	0.28689	0.00016763	-0.22513	-0.00013154	584.307664521923	61.532	1.2337	62.086	61.629	62.863	0.55386					73	29	3	0	0	0	0.19437	4	6586	6550;6561;6575;6586		75.043	30.375	1	439300			66287	14801	44029	44047	75309;75310;75311;75312	75312		211			0.023909215685534946
YEELVRMVL	9	Unmodified	_YEELVRMVL_					0	0	0		nc|ENSG00000092841|P60660-2|MYL6	nc|ENSG00000092841|P60660-2|MYL6	nc|ENSG00000092841|P60660-2|MYL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	576.3101196289062	2	576.310092	1150.60563	-0.94583	-0.00054509	0.89704	0.00051698	-0.048783	-2.8114E-05	576.310390354475	74.799	1.6119	75.19	74.747	76.359	0.3911					89	38	4	0	0	0	0.039957	6	8434	8413;8424;8434;8446;8458;8471		112.41	56.907	1	3347200			66288	14801	44029	44048	75313;75314;75315;75316;75317;75318	75315					0.036352254311623255
YEELVRMVL	9	Unmodified	_YEELVRMVL_					0	0	0		nc|ENSG00000092841|P60660-2|MYL6	nc|ENSG00000092841|P60660-2|MYL6	nc|ENSG00000092841|P60660-2|MYL6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	576.3098754882812	2	576.310092	1150.60563	-0.4664	-0.00026879	0.53409	0.0003078	0.067691	3.9011E-05	576.310168788907	74.622	1.4582	75.18	74.758	76.216	0.55891					89	35	5	0	0	0	0.0062975	6	8462	8429;8438;8450;8462;8475;8487		136.27	57.651	1	3948600			66289	14801	44029	44048	75319;75320;75321;75322;75323;75324	75322					0.036352254311623255
YEEQHHLLLYH	11	Unmodified	_YEEQHHLLLYH_					0	0	0		nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L;chr3:151158799-151159832|38|10.24|0.6|4.1|+|ENST00000474524|MED12L,MED12L;chr3:151156330-151158689|37|12.46|0.65|4.25|+|ENST00000474524|MED12L,MED12L;chr3:151127984-151156161|35|11.06|0.63|4.13|+|ENST00000474524|MED12L,MED12L;chr3:151122974-151127825|32|10.59|0.42|4.64|+|ENST00000474524|MED12L,MED12L;ENSG00000144893|ENST00000687756|MED12L	nc|ENSG00000144893|Q86YW9-4|MED12L	nc|ENSG00000144893|Q86YW9-4|MED12L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	494.5753479003906	3	494.577247	1480.70991	0.2338	0.00011563	-3.7899	-0.0018744	-3.5561	-0.0017588	494.57523523039043	30.953	0.45304	30.972	30.749	31.202	0.01836					27	13	3	0	0	0	0.75544	1	1636	1636		20.837	1.5745	1	55791			66290	393	44030	44049	75325	75325					-0.011213564877380122
YEEQHHLLLYH	11	Unmodified	_YEEQHHLLLYH_					0	0	0		nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L;chr3:151158799-151159832|38|10.24|0.6|4.1|+|ENST00000474524|MED12L,MED12L;chr3:151156330-151158689|37|12.46|0.65|4.25|+|ENST00000474524|MED12L,MED12L;chr3:151127984-151156161|35|11.06|0.63|4.13|+|ENST00000474524|MED12L,MED12L;chr3:151122974-151127825|32|10.59|0.42|4.64|+|ENST00000474524|MED12L,MED12L;ENSG00000144893|ENST00000687756|MED12L	nc|ENSG00000144893|Q86YW9-4|MED12L	nc|ENSG00000144893|Q86YW9-4|MED12L	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		3	494.577247	1480.70991	-0.20139	-9.9602E-05	-3.9688	-0.0019629	-4.1701	-0.0020625	494.5752819816608	30.963	0.52343	30.916	30.692	31.215	-0.047064	-0.013471	-0.00058327	NaN	20.837	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47481			66291	393	44030	44049							-0.011213564877380122
YEEQHHLLLYH	11	Unmodified	_YEEQHHLLLYH_					0	0	0		nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L;chr3:151158799-151159832|38|10.24|0.6|4.1|+|ENST00000474524|MED12L,MED12L;chr3:151156330-151158689|37|12.46|0.65|4.25|+|ENST00000474524|MED12L,MED12L;chr3:151127984-151156161|35|11.06|0.63|4.13|+|ENST00000474524|MED12L,MED12L;chr3:151122974-151127825|32|10.59|0.42|4.64|+|ENST00000474524|MED12L,MED12L;ENSG00000144893|ENST00000687756|MED12L	nc|ENSG00000144893|Q86YW9-4|MED12L	nc|ENSG00000144893|Q86YW9-4|MED12L	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		3	494.577247	1480.70991	-1.2821	-0.00063407	-2.5397	-0.0012561	-3.8218	-0.0018902	494.91001706031824	30.911	0.51385	30.901	30.668	31.182	-0.010656	-0.028788	0.001537	NaN	20.837	31	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47920			66292	393	44030	44049							-0.011213564877380122
YEEQHPEL	8	Unmodified	_YEEQHPEL_					0	0	0		ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-6|IL32	ENSG00000008517|ENST00000525643|IL32	ENSG00000008517|ENST00000525643|IL32	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	522.7357177734375	2	522.735271	1043.45599	0.15399	8.0494E-05	-0.10368	-5.4196E-05	0.050308	2.6298E-05	522.7350997590518	38.374	0.72467	38.716	38.341	39.065	0.34187					47	17	4	0	0	0	5.7375E-08	2	3154	3142;3154		153.04	53.661	1	798470			66293	749	44031	44050	75326;75327	75327					-0.064000035871004
YEEQHPEL	8	Unmodified	_YEEQHPEL_					0	0	0		ENSG00000008517|ENST00000525643|IL32;nc|ENSG00000008517|P24001|IL32;nc|ENSG00000008517|P24001-4|IL32;nc|ENSG00000008517|P24001-5|IL32;nc|ENSG00000008517|P24001-3|IL32;nc|ENSG00000008517|P24001-6|IL32	ENSG00000008517|ENST00000525643|IL32	ENSG00000008517|ENST00000525643|IL32	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.7367553710938	2	522.735271	1043.45599	-0.1959	-0.0001024	0.50792	0.00026551	0.31202	0.00016311	522.7353388172475	38.177	0.84228	38.699	38.32	39.162	0.52235					51	20	4	0	0	0	0.104	1	3137	3137		118.74	39.292	1	707820			66294	749	44031	44050	75328	75328					-0.064000035871004
YEEVFAVP	8	Unmodified	_YEEVFAVP_					0	0	0		nc|ENSG00000156467|P14927-2|UQCRB	nc|ENSG00000156467|P14927-2|UQCRB	nc|ENSG00000156467|P14927-2|UQCRB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	477.2327575683594	2	477.234376	952.454199	-0.2587	-0.00012346	-3.8561	-0.0018403	-4.1148	-0.0019637	477.232447667366	27.666	0.52666	27.627	27.305	27.832	-0.038523					29	12	3	0	0	0	0.94132	1	1347	1347		54.765	3.572	1	76144			66295	15014	44032	44051	75329	75329					-0.023930126050458966
YEEVFAVP	8	Unmodified	_YEEVFAVP_					0	0	0		nc|ENSG00000156467|P14927-2|UQCRB	nc|ENSG00000156467|P14927-2|UQCRB	nc|ENSG00000156467|P14927-2|UQCRB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	477.2316589355469	2	477.234376	952.454199	-0.73634	-0.00035141	-3.9845	-0.0019015	-4.7209	-0.002253	477.23248209178297	27.715	0.68812	27.691	27.379	28.067	-0.023556					36	16	3	0	0	0	0.9159	1	1278	1278		44.531	1.6668	1	77954			66296	15014	44032	44051	75330	75330					-0.023930126050458966
YEEVHVPAL	9	Unmodified	_YEEVHVPAL_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200;nc|ENSG00000144028|O75643-2|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	528.77197265625	2	528.771657	1055.52876	-0.34463	-0.00018223	0.48604	0.00025701	0.14141	7.4773E-05	528.7716918035022	59.601	1.7961	59.992	58.774	60.57	0.39077					89	44	3	0	0	0	0.053315	5	6272	6238;6249;6260;6272;6313		106.42	47.633	1	638800			66297	4683	44033	44052	75331;75332;75333;75334;75335	75334					0.00321750206330762
YEEVHVPAL	9	Unmodified	_YEEVHVPAL_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200;nc|ENSG00000144028|O75643-2|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.7737426757812	2	528.771657	1055.52876	-0.25811	-0.00013648	0.18005	9.5207E-05	-0.078057	-4.1274E-05	528.7715912053746	59.627	1.7456	60.18	58.757	60.502	0.55323					93	43	3	0	0	0	0.14115	4	6271	6220;6243;6271;6305		85.359	37.444	1	1063600			66298	4683	44033	44052	75336;75337;75338;75339	75338					0.00321750206330762
YEFYLSKCSE	10	Unmodified	_YEFYLSKCSE_					0	0	0		nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4;ENSG00000146463|ENST00000314607|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	nc|ENSG00000146463|Q5VZL5-3|ZMYM4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.7734375	2	634.778822	1267.54309	0.16242	0.0001031	-2.0581	-0.0013065	-1.8957	-0.0012034	634.7773669239996	50.354	0.83449	50.262	49.722	50.557	-0.091793					37	22	2	0	0	0	0.86471	1	3965	3965		30.318	3.2704	1	145020			66299	4849	44034	44053	75340	75340					-0.07997965427716736
YEGEIIEESNT	11	Unmodified	_YEGEIIEESNT_					0	0	0			REV__nc|ENSG00000198431|Q16881-3|TXNRD1	REV__nc|ENSG00000198431|Q16881-3|TXNRD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.2869262695312	2	642.285522	1282.55649	0.71427	0.00045877	3.3637	0.0021604	4.0779	0.0026192	642.2875210085433	53.077	0.69441	53.094	52.753	53.448	0.01749					55	19	4	0	0	0	0.51007	1	4672	4672		51.193	1.6567	1	363290	+		66300	30148	44035	44054	75341	75341					-0.07348436114739343
YEGIPVLLSLL	11	Unmodified	_YEGIPVLLSLL_					0	0	0		ENSG00000163491|ENST00000691995|NEK10;nc|ENSG00000163491|Q6ZWH5|NEK10;nc|ENSG00000163491|Q6ZWH5-4|NEK10;nc|ENSG00000163491|Q6ZWH5-2|NEK10	ENSG00000163491|ENST00000691995|NEK10	ENSG00000163491|ENST00000691995|NEK10	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	406.2486267089844	3	406.244435	1215.71148	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.01	1	111.06	110.56	111.56	0.049095								0	0	0	0.56276	1	13472	13472		21.78	5.7737	1				66301	5806	44036	44055	75342	75342					0.11224884548300906
YEGSPIKVTL	10	Unmodified	_YEGSPIKVTL_					0	0	0		ENST00000518587.1_1_5:170814889-170819841:+|nuORF;nc|ENSG00000181163|P06748-3|NPM1;nc|ENSG00000181163|P06748-2|NPM1;ENSG00000181163|ENST00000296930|NPM1;ENST00000502784.2_1_5:93019019-93019256:-|nuORF;ENST00000521260.1_1_5:170818338-170818467:+|nuORF;ENST00000513394.1_1_8:57014234-57014760:-|nuORF	ENST00000518587.1_1_5:170814889-170819841:+|nuORF	ENST00000518587.1_1_5:170814889-170819841:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.8094482421875	2	553.808239	1105.60193	-1.1742	-0.00065028	1.2523	0.00069352	0.078095	4.3249E-05	553.8088317890525	59.066	0.82581	59.458	59.148	59.974	0.39209					47	19	4	0	0	0	0.16188	3	6206	6195;6206;6219		93.598	23.97	1	1045800			66302	7374	44037	44056	75343;75344;75345	75344					0.05334878928965736
YEGSPIKVTL	10	Unmodified	_YEGSPIKVTL_					0	0	0		ENST00000518587.1_1_5:170814889-170819841:+|nuORF;nc|ENSG00000181163|P06748-3|NPM1;nc|ENSG00000181163|P06748-2|NPM1;ENSG00000181163|ENST00000296930|NPM1;ENST00000502784.2_1_5:93019019-93019256:-|nuORF;ENST00000521260.1_1_5:170818338-170818467:+|nuORF;ENST00000513394.1_1_8:57014234-57014760:-|nuORF	ENST00000518587.1_1_5:170814889-170819841:+|nuORF	ENST00000518587.1_1_5:170814889-170819841:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8106689453125	2	553.808239	1105.60193	-0.31244	-0.00017303	0.55319	0.00030636	0.24074	0.00013333	553.8083688108098	58.938	0.90804	59.491	59.13	60.038	0.55323					50	22	3	0	0	0	0.17795	4	6214	6193;6203;6214;6226		91.265	25.744	1	1201200			66303	7374	44037	44056	75346;75347;75348;75349	75348					0.05334878928965736
YEILNNPEL	9	Unmodified	_YEILNNPEL_					0	0	0		ENSG00000134308|ENST00000238081|YWHAQ	ENSG00000134308|ENST00000238081|YWHAQ	ENSG00000134308|ENST00000238081|YWHAQ	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.7832641601562	2	552.782222	1103.54989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.978	1	74.537	74.037	75.037	0.55891								0	0	0	0.013587	1	8354	8354		109.48	24.563	1				66304	3926	44038	44057	75350	75350					0.0022571551517103217
YEILNNPEL	9	Unmodified	_YEILNNPEL_					0	0	0		ENSG00000134308|ENST00000238081|YWHAQ	ENSG00000134308|ENST00000238081|YWHAQ	ENSG00000134308|ENST00000238081|YWHAQ	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	552.783203125	2	552.782222	1103.54989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.073	1	74.632	74.132	75.132	0.55891								0	0	0	0.066824	1	8367	8367		82.75	16.947	1				66305	3926	44038	44057	75351	75351					0.0022571551517103217
YEIYVEDLKK	10	Unmodified	_YEIYVEDLKK_					0	0	0		nc|ENSG00000137033|O95760-3|IL33;ENSG00000137033|ENST00000682010|IL33	nc|ENSG00000137033|O95760-3|IL33	nc|ENSG00000137033|O95760-3|IL33	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.8992004394531	3	433.899216	1298.67582	0.38289	0.00016613	-2.4946	-0.0010824	-2.1117	-0.00091626	433.89805625003885	20.004	0.95407	19.374	19.122	20.076	-0.6296					42	20	4	0	0	0	0.78666	1	587	587		40.058	1.3046	1	502150			66306	4167	44039	44058	75352	75352					0.03842802300596304
YELLRRLF	8	Unmodified	_YELLRRLF_					0	0	0			REV__ENSG00000104884|ENST00000391945|ERCC2	REV__ENSG00000104884|ENST00000391945|ERCC2	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.3141479492188	2	555.326934	1108.63931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.86	1	113.96	113.46	114.46	0.10217								0	0	0	0.30884	1	12204	12204		13.775	2.2643	1		+		66307	17484	44040	44059	75353	75353					0.08934014985220529
YELLSGVLLI	10	Unmodified	_YELLSGVLLI_					0	0	0		ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.341064453125	2	560.336633	1118.65871	3.1454	0.0017625	3.4672	0.0019428	6.6126	0.0037053	560.3384689911447	116.48	4.3432	116.45	115.63	119.97	-0.02433					302	163	2	0	0	0	0.8488	1	13083	13083		17.365	0	1	151040			66308	4656	44041	44060	75354	75354					0.1041292648549188
YELPDGQVI	9	Unmodified	_YELPDGQVI_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2620239257812	2	517.263665	1032.51278	0.52386	0.00027097	-1.7648	-0.00091288	-1.241	-0.00064191	517.2633068603601	77.898	1.2034	78.303	77.763	78.967	0.4053					88	28	5	0	0	0	0.25483	2	8850	8850;8871		68.787	22.781	1	1429900			66309	1338;8080;2370;8106	44042	44061	75355;75356	75355					-0.00217956030564892
YELPDGQVI	9	Unmodified	_YELPDGQVI_					0	0	0		ENSG00000075624|ENST00000646664|ACTB;ENSG00000184009|ENST00000573283|ACTG1;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENSG00000188219|ENST00000683005|POTEE;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI	ENSG00000075624|ENST00000646664|ACTB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	517.262939453125	2	517.263665	1032.51278	-0.093409	-4.8317E-05	-0.89109	-0.00046093	-0.9845	-0.00050924	517.2636433970295	77.758	1.0402	78.326	77.791	78.831	0.56836					85	24	5	0	0	0	0.041233	3	8868	8868;8879;8904		111.65	26.289	1	1637200			66310	1338;8080;2370;8106	44042	44061	75357;75358;75359	75357					-0.00217956030564892
YELSMKLTP	9	Unmodified	_YELSMKLTP_					0	0	0		ENSG00000179761|ENST00000323372|PIPOX;ENST00000580241.5_1_17:27280417-27383320:+|nuORF;ENST00000583215.5_1_17:27338116-27383320:+|nuORF	ENSG00000179761|ENST00000323372|PIPOX	ENSG00000179761|ENST00000323372|PIPOX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	541.2907104492188	2	541.283543	1080.55253	0.81811	0.00044283	2.5256	0.0013671	3.3437	0.0018099	541.2847834834622	20.168	0.8377	20.239	19.945	20.783	0.071129					65	34	3	0	0	0	0.75725	1	451	451		36.447	3.6343	1	219780			66311	7291	44043	44062	75360	75360					0.015478476484986459
YEMDLLTK	8	Unmodified	_YEMDLLTK_					0	0	0		nc|ENSG00000157193|Q14114-2|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;nc|ENSG00000157193|Q14114-3|LRP8;ENSG00000157193|ENST00000306052|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	nc|ENSG00000157193|Q14114-2|LRP8	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	506.75653076171875	2	506.754618	1011.49468	-0.14296	-7.2445E-05	4.1734	0.0021149	4.0305	0.0020424	506.7565004715063	23.302	0.58158	23.25	22.906	23.487	-0.052113					37	19	3	0	0	0	0.91116	1	801	801		42.864	3.6114	1	63577			66312	5415	44044	44063	75361	75361					-0.010604142769238933
YENDYPSVIL	10	Unmodified	_YENDYPSVIL_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	606.7911376953125	2	606.792786	1211.57102	0.067328	4.0854E-05	0.10798	6.5524E-05	0.17531	0.00010638	606.7928339427665	79.616	1.0594	80.166	79.743	80.802	0.54945					55	24	4	0	0	0	0.42393	2	9150	9150;9162		62.107	2.3215	1	1142200			66313	3973	44045	44064	75362;75363	75362					-0.026303191759552647
YEPSRPDEVL	10	Unmodified	_YEPSRPDEVL_					0	0	0			REV__nc|ENSG00000104774|O00754-2|MAN2B1	REV__nc|ENSG00000104774|O00754-2|MAN2B1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	602.7876586914062	2	602.79586	1203.57717	-1.114	-0.00067154	2.3631	0.0014244	1.249	0.0007529	602.796126618129	50.839	0.23336	50.846	50.692	50.925	0.0077438					18	10	2	0	0	0	0.86348	1	4348	4348		31.53	1.0262	1	151080	+		66314	17471	44046	44065	75364	75364					-0.016478009444199415
YEQCEDVDDC	10	Unmodified	_YEQCEDVDDC_					0	0	0			REV__nc|ENSG00000090006|Q8N2S1|LTBP4	REV__nc|ENSG00000090006|Q8N2S1|LTBP4	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	609.6993408203125	2	609.699911	1217.38527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.732	1	21.814	21.314	22.314	0.081615								0	0	0	0.45132	1	623	623		13.454	3.1888	1		+		66315	29723	44047	44066	75365	75365					-0.2147283274923666
YEQILNTKL	9	Unmodified	_YEQILNTKL_					0	0	0		ENSG00000174574|ENST00000432648|AKIRIN1	ENSG00000174574|ENST00000432648|AKIRIN1	ENSG00000174574|ENST00000432648|AKIRIN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.312255859375	2	561.313689	1120.61282	0.64954	0.00036459	-3.5472	-0.0019911	-2.8976	-0.0016265	561.3111530718345	55.875	0.60942	56.276	55.866	56.475	0.40102					24	15	2	0	0	0	0.035861	2	5744	5731;5744		114.86	33.333	1	1178600			66316	6947	44048	44067	75366;75367	75367					0.05734281303239186
YEQLLDVKL	9	Unmodified	_YEQLLDVKL_					0	0	0		ENST00000504788.5_1_5:126112928-126171953:+|nuORF;ENSG00000113368|ENST00000261366|LMNB1	ENST00000504788.5_1_5:126112928-126171953:+|nuORF	ENST00000504788.5_1_5:126112928-126171953:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.8163452148438	2	560.816064	1119.61758	-0.17718	-9.9364E-05	0.096566	5.4156E-05	-0.080611	-4.5208E-05	560.8157342684453	71.553	1.0376	71.938	71.628	72.665	0.38449					55	24	4	0	0	0	1.0899E-20	4	7973	7953;7962;7973;7985		182.39	0	1	1379100			66317	2718	44049	44068	75368;75369;75370;75371	75370					0.06255165445986677
YEQLLDVKL	9	Unmodified	_YEQLLDVKL_					0	0	0		ENST00000504788.5_1_5:126112928-126171953:+|nuORF;ENSG00000113368|ENST00000261366|LMNB1	ENST00000504788.5_1_5:126112928-126171953:+|nuORF	ENST00000504788.5_1_5:126112928-126171953:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.8161010742188	2	560.816064	1119.61758	0.096525	5.4133E-05	-0.29602	-0.00016601	-0.19949	-0.00011188	560.8156249342592	71.482	1.0294	72.03	71.7	72.729	0.5489					50	24	4	0	0	0	1.8502E-13	4	7984	7973;7984;7995;8007		169.65	0	1	1418200			66318	2718	44049	44068	75372;75373;75374;75375	75373					0.06255165445986677
YERRKVLR	8	Unmodified	_YERRKVLR_					0	0	0			REV__nc|ENSG00000152620|Q4G0N4-2|NADK2	REV__nc|ENSG00000152620|Q4G0N4-2|NADK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.841796875	2	560.340907	1118.66726	1.3844	0.00077572	-1.6205	-0.00090801	-0.23608	-0.00013229	560.3398338842395	118.75	0.66116	118.77	118.51	119.17	0.026466					37	27	2	0	0	0	0.82658	1	13096	13096		21.96	4.4919	1	39883	+		66319	20309	44050	44069	75376	75376					0.11267337965296065
YESPGKIFL	9	Unmodified	_YESPGKIFL_					0	0	0		ENSG00000129534|ENST00000310806|MIS18BP1;nc|ENSG00000129534|Q6P0N0-2|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.2845458984375	2	527.2844	1052.55425	-0.30639	-0.00016156	-0.29655	-0.00015636	-0.60294	-0.00031792	527.2840037651778	60.26	0.44954	60.813	60.654	61.104	0.55323					21	12	2	0	0	0	0.69624	1	6389	6389		40.778	1.972	1	382910			66320	3593	44051	44070	75377	75377					0.030072247287534992
YESPGKIFL	9	Unmodified	_YESPGKIFL_					0	0	0		ENSG00000129534|ENST00000310806|MIS18BP1;nc|ENSG00000129534|Q6P0N0-2|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	ENSG00000129534|ENST00000310806|MIS18BP1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	527.2844	1052.55425	-0.30756	-0.00016217	-0.31065	-0.0001638	-0.61822	-0.00032598	527.2840624402273	60.462	0.45452	60.851	60.645	61.1	0.38945	0.018985	-6.195E-06	NaN	40.778	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	349300			66321	3593	44051	44070							0.030072247287534992
YETLPAEMRK	10	Unmodified	_YETLPAEMRK_					0	0	0		nc|ENSG00000068745|Q9UHH9-4|IP6K2;nc|ENSG00000068745|Q9UHH9-5|IP6K2;nc|ENSG00000068745|Q9UHH9-3|IP6K2;nc|ENSG00000068745|Q9UHH9-6|IP6K2;nc|ENSG00000068745|Q9UHH9-2|IP6K2;ENSG00000068745|ENST00000328631|IP6K2	nc|ENSG00000068745|Q9UHH9-4|IP6K2	nc|ENSG00000068745|Q9UHH9-4|IP6K2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.8094482421875	2	619.315906	1236.61726	1.2201	0.00075563	-1.2894	-0.00079852	-0.069261	-4.2894E-05	619.3166503884108	75.845	1.1647	75.97	75.09	76.255	0.12486					40	31	2	0	0	0	0.82886	1	7050	7050		37.812	7.4938	1	119870			66322	14771	44052	44071	75378	75378					0.008414224544821991
YETNRERDL	9	Unmodified	_YETNRERDL_					0	0	0			REV__ENSG00000113212|ENST00000231137|PCDHB7	REV__ENSG00000113212|ENST00000231137|PCDHB7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.2891235351562	2	598.288734	1194.56291	0.49002	0.00029318	-2.7969	-0.0016734	-2.3069	-0.0013802	598.2869929290533	77.957	0.90724	78.363	78.059	78.967	0.40531					53	21	4	0	0	0	0.36616	1	8920	8920		60.118	7.1816	1	1547300	+		66323	17983	44053	44072	75379	75379					-0.026584533727145754
YETTQEPKI	9	Unmodified	_YETTQEPKI_					0	0	0			REV__nc|ENSG00000196092|Q02548-10|PAX5	REV__nc|ENSG00000196092|Q02548-10|PAX5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	554.7784423828125	2	554.779679	1107.5448	0.38375	0.0002129	1.5898	0.00088197	1.9735	0.0010949	554.7802025204654	49.155	0.4868	50.059	49.805	50.292	0.90424					18	11	2	0	0	0	0.71772	1	4810	4810		39.253	2.0937	1	419040	+		66324	23089	44054	44073	75380	75380					-0.00466588347421748
YEVDLVIGLL	10	Unmodified	_YEVDLVIGLL_					0	0	0			REV__ENST00000426228.1_1_3:20082197-20142489:+|nuORF	REV__ENST00000426228.1_1_3:20082197-20142489:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3299560546875	2	567.326265	1132.63798	1.8589	0.0010546	4.3547	0.0024705	6.2136	0.0035251	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.86452	1	9984	9984		30.504	2.6214	1	15439000	+		66325	18035	44055	44074	75381	75381					0.07696336105800583
YEVVDKDSI	9	Unmodified	_YEVVDKDSI_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	534.2667846679688	2	534.266404	1066.51826	-0.58417	-0.0003121	-0.03247	-1.7348E-05	-0.61664	-0.00032945	534.2662959497258	46.097	0.64423	46.569	46.294	46.938	0.47139					31	15	3	0	0	0	0.39367	1	4331	4331		58.23	5.2932	1	1060800			66326	4683	44056	44075	75382	75382					-0.012342772387455625
YEVVDKDSI	9	Unmodified	_YEVVDKDSI_					0	0	0		ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	ENSG00000144028|ENST00000323853|SNRNP200	ENSG00000144028|ENST00000323853|SNRNP200	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	534.2667236328125	2	534.266404	1066.51826	-0.89837	-0.00047997	0.18134	9.6885E-05	-0.71703	-0.00038308	534.2663656537554	45.861	0.47516	46.757	46.526	47.001	0.89542					24	11	3	0	0	0	0.10914	1	4307	4307		90.601	16.346	1	1133300			66327	4683	44056	44075	75383	75383					-0.012342772387455625
YEVVKVIG	8	Unmodified	_YEVVKVIG_					0	0	0		ENSG00000067900|ENST00000399799|ROCK1	ENSG00000067900|ENST00000399799|ROCK1	ENSG00000067900|ENST00000399799|ROCK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	453.7655334472656	2	453.768386	905.522219	-1.2895	-0.00058512	-3.8536	-0.0017487	-5.1431	-0.0023338	453.7664319671317	42.031	1.3122	42.035	41.619	42.931	0.0043983					83	36	3	0	0	0	0.87922	1	2841	2841		31.955	0	1	708440			66328	1191	44057	44076	75384	75384					0.0656785704561571
YEYKFGFEL	9	Unmodified	_YEYKFGFEL_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	598.287353515625	2	598.28714	1194.55973	0.49003	0.00029318	-0.13274	-7.9417E-05	0.35728	0.00021376	598.2869929290533	77.957	0.90724	78.363	78.059	78.967	0.40531					53	21	4	0	0	0	0.29259	2	8896	8883;8896		65.465	12.529	1	1547300			66329	8948	44058	44077	75385;75386	75386					-0.029770964794124666
YEYKFGFEL	9	Unmodified	_YEYKFGFEL_					0	0	0		ENSG00000265972|ENST00000582401|TXNIP;nc|ENSG00000265972|Q9H3M7-2|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	ENSG00000265972|ENST00000582401|TXNIP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	598.287841796875	2	598.28714	1194.55973	-0.27285	-0.00016325	0.67596	0.00040442	0.4031	0.00024117	598.2873802216993	77.829	1.3333	78.393	77.83	79.164	0.56377					66	31	4	0	0	0	0.16822	3	8910	8899;8910;8922		80.455	21.673	1	1529900			66330	8948	44058	44077	75387;75388;75389	75388					-0.029770964794124666
YFAGDHEAN	9	Unmodified	_YFAGDHEAN_					0	0	0			REV__CON__P01044-1	REV__CON__P01044-1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2109985351562	2	512.211963	1022.40937	-0.070945	-3.6339E-05	-3.5141	-0.0018	-3.5851	-0.0018363	512.2100468587475	21.296	0.97677	21.231	20.762	21.739	-0.064743					65	36	2	0	0	0	0.7932	1	588	588		24.203	1.1603	1	43822	+	+	66331	15973	44059	44078	75390	75390					-0.1009344341838414
YFALIVCV	8	Unmodified	_YFALIVCV_					0	0	0			REV__ENSG00000176787|ENST00000321522|OR52E2	REV__ENSG00000176787|ENST00000321522|OR52E2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	464.2534484863281	2	464.254057	926.493561	0.086658	4.0231E-05	-0.17606	-8.1738E-05	-0.089404	-4.1506E-05	464.25387430597084	83.81	8.1201	83.87	79.27	87.39	0.059258					425	201	4	0	0	0	0.91333	1	8720	8720		43.626	13.122	1	1673200	+		66332	22145	44060	44079	75391	75391					0.027374161448278755
YFASLFVDL	9	Unmodified	_YFASLFVDL_					0	0	0			REV__ENST00000419087.1_1_1:247782982-247783861:+|nuORF	REV__ENST00000419087.1_1_1:247782982-247783861:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	537.7776489257812	2	537.778951	1073.54335	-0.043154	-2.3207E-05	-2.235	-0.0012019	-2.2781	-0.0012251	537.7778414033497	44.053	0.8205	44.061	43.725	44.545	0.0084534					30	19	2	0	0	0	0.77546	1	3111	3111		31.955	1.4512	1	141920	+		66333	23328	44061	44080	75392	75392					0.009518223544773718
YFCRGLGP	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))YFCRGLGP_					1	0	0			REV__ENST00000549455.1_1_12:111963110-112036838:-|nuORF	REV__ENST00000549455.1_1_12:111963110-112036838:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	477.7283935546875	2	477.728738	953.442923	1.9069	0.00091096	-2.7369	-0.0013075	-0.83006	-0.00039654	477.7275390599482	95.725	1.691	96.145	95.664	97.355	0.42051					104	40	5	0	0	0	0.92176	1	11441	11441		46.766	7.9603	1	6957300	+		66334	28585	44062	44081	75393	75393					-0.03566113180170305
YFDDALEDF	9	Unmodified	_YFDDALEDF_					0	0	0		ENSG00000183891|ENST00000333610|TTC32	ENSG00000183891|ENST00000333610|TTC32	ENSG00000183891|ENST00000333610|TTC32	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.7344360351562	2	567.734937	1133.45532	0.77905	0.0004423	-0.70538	-0.00040047	0.073675	4.1828E-05	567.7344084671522	88.472	0.6058	88.92	88.635	89.241	0.44893					36	14	3	0	0	0	0.15928	1	10427	10427		82.305	0	1	641390			66335	7572	44063	44082	75394	75394					-0.10606843026812385
YFDFEYPHT	9	Unmodified	_YFDFEYPHT_					0	0	0			REV__ENSG00000126070|ENST00000373191|AGO3	REV__ENSG00000126070|ENST00000373191|AGO3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	609.75634765625	2	609.758746	1217.50294	-0.37818	-0.0002306	-2.2738	-0.0013865	-2.652	-0.0016171	609.7572022370538	55.222	0.55523	55.215	54.942	55.497	-0.0077095					24	13	3	0	0	0	0.78058	1	4921	4921		30.504	0.18592	1	149960	+		66336	18694	44064	44083	75395	75395					-0.09711144035964026
YFDPANGKF	9	Unmodified	_YFDPANGKF_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7508544921875	2	529.750724	1057.4869	0.70872	0.00037545	-0.73765	-0.00039077	-0.028928	-1.5325E-05	529.7502322191626	55.739	0.82926	56.14	55.698	56.527	0.40101					47	21	3	0	0	0	0.0015479	5	5728	5716;5728;5740;5753;5767		143.89	79.679	1	4428500			66337	6314	44065	44084	75396;75397;75398;75399;75400	75397					-0.03954805482203483
YFDPANGKF	9	Unmodified	_YFDPANGKF_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	529.7504272460938	2	529.750724	1057.4869	0.41598	0.00022036	-0.51099	-0.0002707	-0.095014	-5.0333E-05	529.7503275166813	55.568	0.85048	56.136	55.7	56.55	0.56836					52	21	3	0	0	0	2.7574E-05	5	5730	5706;5718;5730;5742;5755		153.04	90.928	1	4883900			66338	6314	44065	44084	75401;75402;75403;75404;75405	75403					-0.03954805482203483
YFDRRKKT	8	Unmodified	_YFDRRKKT_					0	0	0			REV__nc|ENSG00000113391|Q8WUF8-2|ARB2A	REV__nc|ENSG00000113391|Q8WUF8-2|ARB2A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	557.2501831054688	2	557.311815	1112.60908	0.85159	0.0004746	-0.50765	-0.00028292	0.34394	0.00019168	557.813479409099	34.003	0.12685	34.213	34.149	34.276	0.21003					4	2	2	0	0	0	0.4196	1	2489	2489		31.955	6.3808	1	35550	+		66339	17993	44066	44085	75406	75406					0.057276563200503006
YFEAMFSG	8	Unmodified	_YFEAMFSG_					0	0	0		ENSG00000171617|ENST00000302351|ENC1	ENSG00000171617|ENST00000302351|ENC1	ENSG00000171617|ENST00000302351|ENC1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	476.19830322265625	2	476.199479	950.384405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.253	1	26.253	25.753	26.753	0								0	0	0	0.29452	1	999	999		33.516	6.7195	1				66340	6689	44067	44086	75407	75407					-0.09277214545306833
YFEAMFSG	8	Unmodified	_YFEAMFSG_					0	0	0		ENSG00000171617|ENST00000302351|ENC1	ENSG00000171617|ENST00000302351|ENC1	ENSG00000171617|ENST00000302351|ENC1	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.1980895996094	2	476.199479	950.384405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.38	1	119.44	118.94	119.94	0.060577								0	0	0	0.30125	1	12526	12526		20.482	6.7065	1				66341	6689	44067	44086	75408	75408					-0.09277214545306833
YFEELITML	9	Oxidation (M)	_YFEELITM(Oxidation (M))L_		YFEELITM(1)L		YFEELITM(44)L	0	0	1		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	587.7890014648438	2	587.788658	1173.56276	0.87626	0.00051505	-0.13849	-8.1403E-05	0.73777	0.00043365	587.7883287676805	96.649	1.1517	97.053	96.707	97.859	0.40451					51	27	3	0	0	0	0.64922	1	11643	11643		44.117	7.67	1	546740			66342	14964	44068	44087	75409	75409		215			-0.017075894169465755
YFEELITML	9	Oxidation (M)	_YFEELITM(Oxidation (M))L_					0	0	1		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	587.788658	1173.56276	0.81837	0.00048103	-0.2511	-0.00014759	0.56727	0.00033343	587.7882619496867	96.573	1.2766	96.978	96.632	97.909	0.40498	-0.037745	-7.1845E-05	NaN	44.117	53	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	686860			66343	14964	44068	44087				215			-0.017075894169465755
YFEGHLAAYSG	11	Unmodified	_YFEGHLAAYSG_					0	0	0			REV__ENSG00000136490|ENST00000259006|LIMD2	REV__ENSG00000136490|ENST00000259006|LIMD2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	608.6216430664062	2	607.77747	1213.54039	0.11165	6.7855E-05	-3.1821	-0.001934	-3.0704	-0.0018661	607.7755854801296	31.642	0.49078	31.591	31.428	31.919	-0.051031					16	10	2	0	0	0	0.1728	1	1815	1815		31.53	1.2121	1	43662	+		66344	19315	44069	44088	75410	75410					-0.05784052770331982
YFFGKVTQM	9	Unmodified	_YFFGKVTQM_					0	0	0			REV__ENSG00000146918|ENST00000356309|NCAPG2	REV__ENSG00000146918|ENST00000356309|NCAPG2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.7800903320312	2	560.778428	1119.5423	0.31477	0.00017651	0.83632	0.00046899	1.1511	0.0006455	560.7791508296577	52.432	0.74635	52.856	52.638	53.384	0.42348					39	17	4	0	0	0	0.67345	1	5263	5263		42.396	0	1	1492600	+		66345	20042	44070	44089	75411	75411					-0.012687152860735296
YFFQRAELS	9	Unmodified	_YFFQRAELS_					0	0	0			REV__ENSG00000144589|ENST00000456909|STK11IP	REV__ENSG00000144589|ENST00000456909|STK11IP	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.7906494140625	2	580.790381	1159.56621	-0.54253	-0.00031509	0.8837	0.00051325	0.34118	0.00019815	580.7907032507866	19.861	1.1389	19.232	18.937	20.076	-0.62961					54	24	3	0	0	0	0.78058	1	574	574		30.504	6.3009	1	347400	+		66346	19901	44071	44090	75412	75412					-0.0071915852806796465
YFFWYLLQRRF	11	Unmodified	_YFFWYLLQRRF_					0	0	0			REV__nc|ENSG00000100979|P55058-4|PLTP	REV__nc|ENSG00000100979|P55058-4|PLTP	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.26171875	3	546.957511	1637.8507	-1.6528	-0.00090403	3.7638	0.0020587	2.111	0.0011546	547.2954220036601	30.843	0.13363	30.923	30.811	30.945	0.079834					4	2	2	0	0	0	0.18364	1	2031	2031		3.6191	2.2003	1	22503	+		66347	17232	44072	44091	75413	75413					0.05729266956268475
YFGNLTKVT	9	Unmodified	_YFGNLTKVT_					0	0	0			REV__ENSG00000155265|ENST00000370602|GOLGA7B	REV__ENSG00000155265|ENST00000370602|GOLGA7B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7813110351562	2	521.782025	1041.5495	-0.36396	-0.00018991	-0.15338	-8.0029E-05	-0.51734	-0.00026994	521.781827522837	48.002	1.084	48.925	48.503	49.587	0.92315					72	26	4	0	0	0	0.38563	1	4627	4627		58.782	0	1	8503600	+		66348	20419	44073	44092	75414	75414					0.030383405859765844
YFHLKLTRN	9	Unmodified	_YFHLKLTRN_					0	0	0			REV__ENST00000557380.5_1_14:50318303-50318570:-|nuORF	REV__ENST00000557380.5_1_14:50318303-50318570:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	596.333251953125	2	596.33529	1190.65603	0.54724	0.00032634	-4.4083	-0.0026288	-3.861	-0.0023025	596.3325172883492	95.985	3.4694	96.39	95.216	98.686	0.40451					232	84	4	0	0	0	0.76996	1	11614	11614		33.516	3.1979	1	1225200	+		66349	28716	44074	44093	75415	75415					0.0683251587115592
YFHLRHRGVV	10	Unmodified	_YFHLRHRGVV_					0	0	0		ENST00000586616.5_1_19:1483766-1490130:-|nuORF;ENST00000441747.6_1_19:1482426-1490130:-|nuORF;ENST00000588195.5_1_19:1483001-1490375:-|nuORF;ENSG00000115257|ENST00000300954|PCSK4	ENST00000586616.5_1_19:1483766-1490130:-|nuORF	ENST00000586616.5_1_19:1483766-1490130:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.361328125	2	642.359631	1282.70471	0.9424	0.00060536	3.1528	0.0020252	4.0952	0.0026306	642.3625500461095	111.89	0.67577	111.96	111.47	112.15	0.069542					73	20	4	0	0	0	0.37624	1	12073	12073		31.955	8.9124	1	15356000			66350	2825	44075	44094	75416	75416					0.07466429230908034
YFIAPAKFLG	10	Unmodified	_YFIAPAKFLG_					0	0	0		ENSG00000135862|ENST00000258341|LAMC1	ENSG00000135862|ENST00000258341|LAMC1	ENSG00000135862|ENST00000258341|LAMC1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	563.8155517578125	2	563.81841	1125.62227	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.149	1	57.12	56.62	57.62	-0.02866								0	0	0	0.45132	1	5260	5260		30.504	6.3009	1				66351	4059	44076	44095	75417	75417					0.06448094379402391
YFIGFQRSIL	10	Unmodified	_YFIGFQRSIL_					0	0	0		nc|ENSG00000182346|P59103-4|DAOA;ENSG00000182346|ENST00000375936|DAOA	nc|ENSG00000182346|P59103-4|DAOA	nc|ENSG00000182346|P59103-4|DAOA	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	622.3467407226562	2	622.345323	1242.67609	-1.2166	-0.00075714	3.6166	0.0022508	2.4001	0.0014937	622.3475745875962	95.767	2.795	95.97	95.191	97.986	0.20242					140	65	3	0	0	0	0.86763	1	9784	9784		26.693	3.1702	1	410920			66352	7451	44077	44096	75418	75418					0.06446266811144596
YFIPFLILQE	10	Unmodified	_YFIPFLILQE_					0	0	0		ENST00000495880.1_1_3:52084162-52084369:-|nuORF	ENST00000495880.1_1_3:52084162-52084369:-|nuORF	ENST00000495880.1_1_3:52084162-52084369:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3639526367188	2	641.857732	1281.70091	1.7061	0.001095	1.2492	0.00080182	2.9553	0.0018969	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.8608	1	13145	13145		34.173	7.4796	1	27133000			66353	12775	44078	44097	75419	75419					0.07132901893828603
YFISPLIFILS	11	Unmodified	_YFISPLIFILS_					0	0	0			REV__ENSG00000017483|ENST00000620913|SLC38A5	REV__ENSG00000017483|ENST00000620913|SLC38A5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	438.2578125	3	438.256564	1311.74786	0.21129	9.2599E-05	2.5281	0.001108	2.7394	0.0012006	438.2576083423229	29.948	1.2574	29.973	29.652	30.909	0.025013					91	35	4	0	0	0	0.71803	1	1500	1500		28.577	0	1	433100	+		66354	16220	44079	44098	75420	75420					0.10445761444998425
YFISVIMDND	10	Unmodified	_YFISVIMDND_					0	0	0			REV__ENSG00000181698|ENST00000641665|OR5T1	REV__ENSG00000181698|ENST00000641665|OR5T1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	609.2869262695312	2	608.781364	1215.54818	0.4097	0.00024942	3.9552	0.0024078	4.3649	0.0026572	608.7830450701787	59.037	1.8079	59.006	58.103	59.911	-0.030888					62	51	2	0	0	0	0.67571	1	5502	5502		45.972	6.7194	1	200150	+		66355	22473	44080	44099	75421	75421					-0.0509766156508249
YFKLTKRYNRK	11	Unmodified	_YFKLTKRYNRK_					0	0	0			REV__ENSG00000171798|ENST00000304613|KNDC1	REV__ENSG00000171798|ENST00000304613|KNDC1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.7684020996094	3	506.296415	1515.86742	0.93712	0.00047446	2.2084	0.0011181	3.1455	0.0015925	506.6307389497867	19.209	0.44281	18.579	18.358	18.801	-0.6296					19	9	3	0	0	0	0.17911	1	508	508		13.508	0.55046	1	76532	+		66356	21768	44081	44100	75422	75422					0.13011767842272093
YFKMSSLSF	9	Unmodified	_YFKMSSLSF_					0	0	0			REV__ENSG00000047365|ENST00000303965|ARAP2	REV__ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	556.2724609375	2	555.270435	1108.52632	0.016599	9.2168E-06	3.0861	0.0017136	3.1027	0.0017228	555.2740240481572	75.662	1.4549	76.057	75.198	76.653	0.39507					89	34	5	0	0	0	0.78983	1	8555	8555		27.882	3.3631	1	647320	+		66357	16351	44082	44101	75423	75423					-0.023604215229852343
YFKNHMMLL	9	Unmodified	_YFKNHMMLL_					0	0	0		ENST00000315691.7_1_3:143708817-143709024:+|nuORF	ENST00000315691.7_1_3:143708817-143709024:+|nuORF	ENST00000315691.7_1_3:143708817-143709024:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.7997436523438	2	598.80138	1195.58821	-0.77716	-0.00046537	0.33331	0.00019959	-0.44385	-0.00026578	598.8013448272425	63.345	0.56187	63.345	63.143	63.704	0					43	24	2	0	0	0	0.77546	1	5534	5534		31.955	0.42505	1	108740			66358	9981	44083	44102	75424	75424					-0.001763933755000835
YFKRKKLYFKR	11	Unmodified	_YFKRKKLYFKR_					0	0	0			REV__ENST00000342992.10_3_2:179540701-179542581:-|nuORF	REV__ENST00000342992.10_3_2:179540701-179542581:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	526.3247680664062	3	526.320672	1575.94019	4.9789	0.0026205	3.7178	0.0019567	8.6967	0.0045773	526.3222846142238	107.86	0.15526	107.97	107.88	108.04	0.11715					9	4	3	0	0	0	0.89497	1	13199	13199		3.026	1.6072	1	5707100	+		66359	25286	44084	44103	75425	75425					0.1752552163566179
YFKTPRKFV	9	Unmodified	_YFKTPRKFV_					0	0	0		nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	nc|ENSG00000148337|Q9ULV3-5|CIZ1	nc|ENSG00000148337|Q9ULV3-5|CIZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	593.3436279296875	2	593.342584	1184.67061	-0.61427	-0.00036447	3.7298	0.002213	3.1155	0.0018486	593.3447041008176	103.62	2.4136	103.61	103.22	105.64	-0.0035706					155	57	4	0	0	0	0.77244	1	11201	11201		32.812	6.749	1	2207400			66360	4951	44085	44104	75426	75426					0.08566588019289156
YFKTPRKFV	9	Unmodified	_YFKTPRKFV_					0	0	0		nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	nc|ENSG00000148337|Q9ULV3-5|CIZ1	nc|ENSG00000148337|Q9ULV3-5|CIZ1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	593.3442993164062	2	593.342584	1184.67061	3.3538	0.0019899	-0.42108	-0.00024984	2.9327	0.0017401	593.3422294286001	103.53	2.4934	103.48	103.12	105.61	-0.043755					162	59	4	0	0	0	0.7932	1	11308	11308		26.693	1.1189	1	2080000			66361	4951	44085	44104	75427	75427					0.08566588019289156
YFKVRLHLC	9	Unmodified	_YFKVRLHLC_					0	0	0			REV__nc|ENSG00000115109|Q9HCM4-2|EPB41L5	REV__nc|ENSG00000115109|Q9HCM4-2|EPB41L5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	588.9854125976562	2	589.828786	1177.64302	0.45532	0.00026856	-1.5222	-0.00089785	-1.0669	-0.00062929	590.3266820210108	38.029	0.23951	37.971	37.798	38.038	-0.057915					8	6	2	0	0	0	0.20789	1	2203	2203		19.36	2.6426	1	37311	+		66362	18085	44086	44105	75428	75428					0.061303614874532286
YFLCRVLY	8	Unmodified	_YFLCRVLY_					0	0	0			REV__ENST00000371752.5_2_20:47863066-47863198:-|nuORF	REV__ENST00000371752.5_2_20:47863066-47863198:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.7453002929688	2	538.783513	1075.55247	-0.68733	-0.00037032	-1.8565	-0.0010002	-2.5438	-0.0013706	538.781430064154	54.743	0.50422	55.311	55.027	55.531	0.56836					17	11	2	0	0	0	0.4196	1	5596	5596		42.474	0.078325	1	189640	+		66363	25696	44087	44106	75429	75429					0.017718924391829205
YFLLEFNL	8	Unmodified	_YFLLEFNL_					0	0	0			REV__ENST00000535549.5_1_11:128331948-128332230:-|nuORF	REV__ENST00000535549.5_1_11:128331948-128332230:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	529.7843627929688	2	529.781493	1057.54843	0.45896	0.00024315	-1.0947	-0.00057996	-0.63575	-0.00033681	529.7806261653575	52.825	1.5318	53.249	52.638	54.169	0.42348					117	36	6	0	0	0	0.884	1	5344	5344		33.516	0	1	6482700	+		66364	28390	44088	44107	75430	75430					0.021961262170862028
YFLMSKVLTI	10	Unmodified	_YFLMSKVLTI_					0	0	0			REV__ENSG00000165905|ENST00000401752|LARGE2	REV__ENSG00000165905|ENST00000401752|LARGE2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.8984680175781	3	405.566632	1213.67807	-1.8603	-0.00075448	-2.7118	-0.0010998	-4.5721	-0.0018543	405.5653949658049	63.143	1.4987	63.257	62.721	64.22	0.11388					139	74	3	0	0	0	0.86647	1	5531	5531		28.577	13.239	1	273590	+		66365	21231	44089	44108	75431	75431					0.0797755950472947
YFLSLLVF	8	Unmodified	_YFLSLLVF_					0	0	0		ENSG00000163482|ENST00000295709|STK36;nc|ENSG00000163482|Q9NRP7-2|STK36;ENST00000486644.1_1_2:219558031-219561354:+|nuORF	ENSG00000163482|ENST00000295709|STK36	ENSG00000163482|ENST00000295709|STK36	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.2907409667969	2	501.288954	1000.56336	1.1291	0.00056599	1.8483	0.00092655	2.9774	0.0014925	501.28978873030707	86.515	5.9843	86.441	85.364	91.348	-0.073761					540	141	6	0	0	0	0.89457	1	9356	9356		37.028	0	1	9883700			66366	5805	44090	44109	75432	75432					0.06309618085094826
YFLSRIVSH	9	Unmodified	_YFLSRIVSH_					0	0	0			REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	REV__nc|ENSG00000154358|Q5VST9-6|OBSCN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3124389648438	2	561.308741	1120.60293	0.39133	0.00021966	2.8329	0.0015901	3.2242	0.0018098	561.3093913762153	55.356	2.8595	55.925	53.691	56.55	0.56836					96	69	3	0	0	0	0.6204	1	5745	5745		45.972	5.9141	1	1532900	+		66367	20385	44091	44110	75433	75433					0.0474513808849224
YFLTLQLDT	9	Unmodified	_YFLTLQLDT_					0	0	0		ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000130827|ENST00000369682|PLXNA3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	556.3073120117188	2	557.294965	1112.57538	-1.4285	-0.00079609	2.6107	0.0014549	1.1822	0.00065884	557.2964069469533	90.587	1.415	90.767	89.742	91.157	0.18028					53	33	2	0	0	0	0.20789	1	9001	9001		29.15	3.5755	1	91338			66368	3691	44092	44111	75434	75434					0.02359190037600456
YFLTVVSLHS	10	Unmodified	_YFLTVVSLHS_					0	0	0			REV__ENSG00000127530|ENST00000641666|OR7C1	REV__ENSG00000127530|ENST00000641666|OR7C1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.3538818359375	2	583.316232	1164.61791	0.067806	3.9552E-05	3.2151	0.0018754	3.2829	0.001915	583.318387860973	103.35	0.31151	103.39	103.32	103.63	0.041481					10	7	2	0	0	0	0.37624	1	11232	11232		35.618	12.576	1	49219	+		66369	18739	44093	44112	75435	75435					0.042185851658587126
YFMSGVHQ	8	Unmodified	_YFMSGVHQ_					0	0	0			REV__ENSG00000187033|ENST00000335556|SAMD7	REV__ENSG00000187033|ENST00000335556|SAMD7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	484.7182312011719	2	484.71837	967.422187	-0.725	-0.00035142	0.46197	0.00022392	-0.26304	-0.0001275	484.71847241575296	100.07	1.4337	100.28	99.734	101.17	0.21511					64	33	3	0	0	0	0.89494	1	10473	10473		37.159	0	1	545270	+		66370	22897	44094	44113	75436	75436					-0.06282703559827496
YFPFAKIEL	9	Unmodified	_YFPFAKIEL_					0	0	0			REV__ENST00000511830.2_1_5:69390488-69422514:-|nuORF	REV__ENST00000511830.2_1_5:69390488-69422514:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.3084716796875	2	564.310418	1126.60628	0.17086	9.6419E-05	-3.7666	-0.0021255	-3.5957	-0.0020291	564.3081374246972	75.153	0.67262	75.548	75.279	75.952	0.39507					37	15	3	0	0	0	0.58151	1	8493	8493		47.916	0.25827	1	1075700	+		66371	23864	44095	44114	75437	75437					0.04804388142520111
YFRAKKAK	8	Unmodified	_YFRAKKAK_					0	0	0			REV__nc|ENSG00000170390|Q8N568-2|DCLK2	REV__nc|ENSG00000170390|Q8N568-2|DCLK2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	506.3127136230469	2	506.308544	1010.60253	-0.62631	-0.00031711	2.3163	0.0011728	1.69	0.00085565	506.31007289516646	61.122	1.0995	61.13	60.064	61.164	0.0081215					63	39	2	0	0	0	0.884	1	5312	5312		33.516	11.556	1	191720	+		66372	21656	44096	44115	75438	75438					0.0976576315931652
YFRETLAVC	9	Unmodified	_YFRETLAVC_					0	0	0		ENST00000489412.1_1_6:145956297-145956603:-|nuORF	ENST00000489412.1_1_6:145956297-145956603:-|nuORF	ENST00000489412.1_1_6:145956297-145956603:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.2755737304688	2	551.273509	1100.53247	0.87571	0.00048275	2.5513	0.0014065	3.427	0.0018892	551.2747934781779	27.265	1.266	27.237	26.749	28.015	-0.027706					88	32	4	0	0	0	0.74721	1	1258	1258		37.159	1.5408	1	621530			66373	12651	44097	44116	75439	75439					-0.013779032914499112
YFRKFRRRKEK	11	Unmodified	_YFRKFRRRKEK_					0	0	0		nc|ENSG00000102001|O60840-4|CACNA1F;nc|ENSG00000102001|O60840-6|CACNA1F;ENSG00000102001|ENST00000323022|CACNA1F;nc|ENSG00000102001|O60840|CACNA1F;nc|ENSG00000102001|O60840-5|CACNA1F;nc|ENSG00000102001|O60840-7|CACNA1F	nc|ENSG00000102001|O60840-4|CACNA1F	nc|ENSG00000102001|O60840-4|CACNA1F	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.5179748535156	4	404.242938	1612.94265	2.0981	0.00084816	4.2273	0.0017089	6.3254	0.002557	404.244486483559	25.011	0.66634	24.497	24.19	24.856	-0.51365					25	14	2	0	0	0	0.18408	1	1244	1244		0.3405	0	1	177010			66374	1980	44098	44117	75440	75440					0.16069370093305224
YFRRLSILLG	10	Unmodified	_YFRRLSILLG_					0	0	0		ENST00000381222.8_2_X:2404887-2405136:-|nuORF	ENST00000381222.8_2_X:2404887-2405136:-|nuORF	ENST00000381222.8_2_X:2404887-2405136:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.3717651367188	2	619.374415	1236.73428	-1.2262	-0.00075948	-3.0346	-0.0018796	-4.2608	-0.0026391	619.3724290211392	101.55	1.3094	101.7	101.32	102.63	0.15505					84	32	4	0	0	0	0.86589	1	10621	10621		29.15	2.4566	1	1786600			66375	10947	44099	44118	75441	75441					0.1253794845642915
YFRYLAEV	8	Unmodified	_YFRYLAEV_					0	0	0		ENSG00000134308|ENST00000238081|YWHAQ	ENSG00000134308|ENST00000238081|YWHAQ	ENSG00000134308|ENST00000238081|YWHAQ	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.7788696289062	2	530.776742	1059.53893	0.16511	8.7634E-05	3.3361	0.0017707	3.5012	0.0018584	530.7787664374874	55.197	0.70773	55.765	55.531	56.239	0.56836					37	16	4	0	0	0	0.9295	1	5683	5683		55.504	13.03	1	1565500			66376	3926	44100	44119	75442	75442					0.011543579315457464
YFSGRRERLL	10	Unmodified	_YFSGRRERLL_					0	0	0		ENSG00000116183|ENST00000367662|PAPPA2;nc|ENSG00000116183|Q9BXP8-2|PAPPA2	ENSG00000116183|ENST00000367662|PAPPA2	ENSG00000116183|ENST00000367662|PAPPA2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.3926391601562	2	648.862203	1295.70985	1.6035	0.0010404	3.9908	0.0025895	5.5943	0.00363	648.8632554303173	106.03	0.30816	106.18	105.95	106.26	0.14843					11	7	2	0	0	0	0.37624	1	11305	11305		42.396	10.762	1	158390			66377	2906	44101	44120	75443	75443					0.07382688302891438
YFSLLIFPQIL	11	Unmodified	_YFSLLIFPQIL_					0	0	0			REV__ENST00000472940.5_1_17:58008327-58013674:+|nuORF	REV__ENST00000472940.5_1_17:58008327-58013674:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9321594238281	3	451.93208	1352.77441	-0.13839	-6.2545E-05	1.5226	0.00068809	1.3842	0.00062555	451.93267141602934	99.223	2.3092	99.273	97.79	100.1	0.049828					147	53	3	0	0	0	0.74405	1	10483	10483		23.378	4.1152	1	486010	+		66378	27273	44102	44121	75444	75444					0.1121345033632224
YFTRLREARA	10	Unmodified	_YFTRLREARA_					0	0	0		nc|ENSG00000114302|P13861-2|PRKAR2A;ENSG00000114302|ENST00000265563|PRKAR2A	nc|ENSG00000114302|P13861-2|PRKAR2A	nc|ENSG00000114302|P13861-2|PRKAR2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.364990234375	2	641.854378	1281.6942	7.1265	0.0045742	0.9889	0.00063473	8.1154	0.0052089	642.3571636647225	114.03	1.6655	114.03	113.43	115.1	0.0011978					95	70	2	0	0	0	0.8505	1	13840	13840		19.104	0.84144	1	98705			66379	2765	44103	44122	75445	75445					0.0646240178584776
YFVDKQLV	8	Unmodified	_YFVDKQLV_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	505.2918701171875	2	506.279118	1010.54368	-0.41222	-0.0002087	1.0313	0.00052213	0.61909	0.00031343	506.2796603332206	97.089	0.99969	97.32	96.999	97.998	0.23103					29	23	2	0	0	0	0.4196	1	9998	9998		12.207	0	1	103310			66380	5333	44104	44123	75446	75446					0.03883242074323334
YFVELAFSKL	10	Unmodified	_YFVELAFSKL_					0	0	0			REV__ENSG00000142327|ENST00000270357|RNPEPL1	REV__ENSG00000142327|ENST00000270357|RNPEPL1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	608.8384399414062	2	608.834257	1215.65396	2.5696	0.0015645	2.8379	0.0017278	5.4075	0.0032922	608.8359461538699	110.06	0.58868	110.12	109.94	110.52	0.054062					49	20	3	0	0	0	0.86718	1	13346	13346		27.882	0	1	4210900	+		66381	19737	44105	44124	75447	75447					0.05476042342706933
YFVGHIYF	8	Unmodified	_YFVGHIYF_					0	0	0			REV__nc|ENSG00000157911|O60683-2|PEX10	REV__nc|ENSG00000157911|O60683-2|PEX10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.7611083984375	2	523.260728	1044.5069	0.5992	0.00031354	-1.5218	-0.00079632	-0.92264	-0.00048278	523.7604804784513	60.52	0.95633	60.487	59.981	60.938	-0.032513					74	26	4	0	0	0	0.88393	1	5713	5713		33.493	0	1	391710	+		66382	29957	44106	44125	75448	75448					-0.013570097515867019
YFVPLVIGIL	10	Unmodified	_YFVPLVIGIL_					0	0	0			REV__ENSG00000183060|ENST00000684762|LYSMD4	REV__ENSG00000183060|ENST00000684762|LYSMD4	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	567.3297729492188	2	567.352086	1132.68962	-0.51431	-0.0002918	-3.8554	-0.0021874	-4.3697	-0.0024792	567.3495736970757	92.786	0.34793	92.786	92.633	92.981	0					11	7	2	0	0	0	0.37624	1	9144	9144		35.201	15.841	1	87528	+		66383	22572	44107	44126	75449	75449					0.1285812459036606
YFWKLGNR	8	Unmodified	_YFWKLGNR_					0	0	0		ENSG00000102921|ENST00000262384|N4BP1;ENST00000564124.5_1_16:48580029-48653834:-|nuORF	ENSG00000102921|ENST00000262384|N4BP1	ENSG00000102921|ENST00000262384|N4BP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.2279663085938	2	542.290351	1082.56615	-0.33385	-0.00018104	-0.65763	-0.00035663	-0.99148	-0.00053767	542.2896158896394	55.682	0.62125	56.083	55.698	56.319	0.40102					22	14	3	0	0	0	0.4196	1	5743	5743		44.531	2.0566	1	414600			66384	2034	44108	44127	75450	75450					0.028168862625989277
YFWPRTVP	8	Unmodified	_YFWPRTVP_					0	0	0		ENST00000471702.2_2_3:132339980-132400782:-|nuORF;ENST00000469042.5_1_3:132298334-132378619:-|nuORF;nc|ENSG00000240303|Q709F0-3|ACAD11;nc|ENSG00000240303|Q709F0-2|ACAD11;ENSG00000240303|ENST00000264990|ACAD11	ENST00000471702.2_2_3:132339980-132400782:-|nuORF	ENST00000471702.2_2_3:132339980-132400782:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	533.2763671875	2	533.279452	1064.54435	-0.86845	-0.00046313	-3.4177	-0.0018226	-4.2862	-0.0022857	533.2778943952202	80.824	0.62727	80.824	80.535	81.162	0					25	18	2	0	0	0	0.90465	1	7475	7475		40.573	1.3198	1	82790			66385	12246	44109	44128	75451	75451					0.0146608151401324
YFYKGIITLA	10	Unmodified	_YFYKGIITLA_					0	0	0			REV__ENST00000549928.5_1_12:60154925-60173457:+|nuORF	REV__ENST00000549928.5_1_12:60154925-60173457:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	594.8374633789062	2	594.8368	1187.65905	-0.22069	-0.00013127	2.3401	0.001392	2.1194	0.0012607	594.8381332628321	69.679	0.59947	69.642	69.378	69.978	-0.036957					55	31	2	0	0	0	0.85939	1	6747	6747		23.042	0.46283	1	1810100	+		66386	18323	44110	44129	75452	75452					0.07272346205331814
YGAAKMIFSDN	11	Unmodified	_YGAAKMIFSDN_					0	0	0		ENSG00000188641|ENST00000370192|DPYD;nc|ENSG00000188641|Q12882-2|DPYD	ENSG00000188641|ENST00000370192|DPYD	ENSG00000188641|ENST00000370192|DPYD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.7833251953125	2	608.786981	1215.55941	-1.6114	-0.000981	-3.3053	-0.0020122	-4.9167	-0.0029932	608.7842044463049	58.895	1.1718	58.929	58.521	59.692	0.033905					46	33	2	0	0	0	0.60058	1	5425	5425		44.377	1.5129	1	181870			66387	7944	44111	44130	75453	75453					-0.039748394709249624
YGAAMVVMAF	10	Unmodified	_YGAAMVVMAF_					0	0	0		ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR	ENSG00000116984|ENST00000366577|MTR	ENSG00000116984|ENST00000366577|MTR	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.2557983398438	2	530.253731	1058.49291	-0.11428	-6.0599E-05	-1.7887	-0.00094846	-1.903	-0.0010091	530.2525737787886	65.479	0.58937	65.609	65.287	65.876	0.12996					50	28	3	0	0	0	0.70264	1	5790	5790		44.531	5.2782	1	782560			66388	2957	44112	44131	75454	75454					-0.03399746566537942
YGAGECLL	8	Unmodified	_YGAGECLL_					0	0	0			REV__ENST00000506919.1_1_4:146560261-146567442:+|nuORF	REV__ENST00000506919.1_1_4:146560261-146567442:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.1942443847656	2	413.194196	824.37384	0.11885	4.911E-05	-1.3153	-0.00054348	-1.1965	-0.00049437	413.19356375040996	78.966	3.3342	78.912	78.52	81.854	-0.053558					185	96	2	0	0	0	0.87276	1	7902	7902		29.842	1.5873	1	948300	+		66389	20260	44113	44132	75455	75455					-0.0453719719973833
YGAHVVGIGV	10	Unmodified	_YGAHVVGIGV_					0	0	0			REV__ENSG00000116138|ENST00000375847|DNAJC16	REV__ENSG00000116138|ENST00000375847|DNAJC16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	486.2669372558594	2	486.269084	970.523616	-1.0938	-0.00053186	-2.8649	-0.0013931	-3.9586	-0.0019249	486.26757913646117	86.138	4.733	86.196	84.979	89.712	0.057899					342	110	5	0	0	0	0.85976	1	8714	8714		35.201	6.0307	1	1852700	+		66390	18182	44114	44133	75456	75456					0.0371749113437545
YGAVKRRTKA	10	Unmodified	_YGAVKRRTKA_					0	0	0			REV__ENSG00000205413|ENST00000379958|SAMD9	REV__ENSG00000205413|ENST00000379958|SAMD9	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.3456420898438	2	575.346189	1148.67783	0.94019	0.00054093	-1.3159	-0.0007571	-0.37572	-0.00021617	575.3454322863764	98.249	1.7248	98.634	98.18	99.904	0.38548					107	42	5	0	0	0	0.86272	1	11813	11813		24.519	2.5593	1	3140900	+		66391	23558	44115	44134	75457	75457					0.10943320619730912
YGCPQCGKDFS	11	Unmodified	_YGCPQCGKDFS_					0	0	0		ENST00000483450.1_1_6:28962780-28967471:-|nuORF;ENSG00000197935|ENST00000377179|ZNF311	ENST00000483450.1_1_6:28962780-28967471:-|nuORF	ENST00000483450.1_1_6:28962780-28967471:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	602.7418823242188	2	602.741716	1203.46888	-0.44083	-0.0002657	0.73487	0.00044294	0.29405	0.00017723	602.7420137971703	85.061	0.92115	85.061	84.569	85.49	0					45	20	3	0	0	0	0.65746	1	8059	8059		37.812	2.1932	1	292590			66392	8214	44116	44135	75458	75458					-0.12471631790867832
YGDHTKLIL	9	Unmodified	_YGDHTKLIL_					0	0	0		ENSG00000173846|ENST00000372201|PLK3;ENST00000465443.5_1_1:45270304-45271347:+|nuORF	ENSG00000173846|ENST00000372201|PLK3	ENSG00000173846|ENST00000372201|PLK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	530.293212890625	2	530.295299	1058.57605	-0.066725	-3.5384E-05	-3.5889	-0.0019032	-3.6556	-0.0019386	530.2933031319277	90.285	3.7542	90.498	89.389	93.143	0.21271					296	89	5	0	0	0	0.67345	1	9218	9218		42.396	10.866	1	2084800			66393	6891	44117	44136	75459	75459					0.049100294773325004
YGDHTKLIL	9	Unmodified	_YGDHTKLIL_					0	0	0		ENSG00000173846|ENST00000372201|PLK3;ENST00000465443.5_1_1:45270304-45271347:+|nuORF	ENSG00000173846|ENST00000372201|PLK3	ENSG00000173846|ENST00000372201|PLK3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.2933349609375	2	530.295299	1058.57605	-1.5163	-0.00080409	-2.0724	-0.001099	-3.5887	-0.0019031	530.2940780272841	90.467	4.5005	90.646	89.436	93.936	0.17891					321	106	5	0	0	0	0.67345	1	9048	9048		42.396	3.59	1	1686700			66394	6891	44117	44136	75460	75460					0.049100294773325004
YGDHTKLIL	9	Unmodified	_YGDHTKLIL_					0	0	0		ENSG00000173846|ENST00000372201|PLK3;ENST00000465443.5_1_1:45270304-45271347:+|nuORF	ENSG00000173846|ENST00000372201|PLK3	ENSG00000173846|ENST00000372201|PLK3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	530.2935791015625	2	530.295299	1058.57605	-1.2396	-0.00065735	-2.6354	-0.0013976	-3.875	-0.0020549	530.2939694844079	90.363	3.249	90.834	89.762	93.011	0.47068					183	79	4	0	0	0	0.78058	1	10782	10782		30.504	0.18592	1	1818700			66395	6891	44117	44136	75461	75461					0.049100294773325004
YGDIRRLRLVR	11	Unmodified	_YGDIRRLRLVR_					0	0	0		ENSG00000184209|ENST00000526639|SNRNP35;nc|ENSG00000184209|Q16560-2|SNRNP35	ENSG00000184209|ENST00000526639|SNRNP35	ENSG00000184209|ENST00000526639|SNRNP35	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.9582824707031	3	472.956393	1415.84735	0.74004	0.00035001	1.6764	0.00079285	2.4164	0.0011429	472.9572235267456	34.131	1.5761	34.341	33.44	35.016	0.21002					95	37	4	0	0	0	0.73277	1	2553	2553		25.892	4.8595	1	2079600			66396	7590	44118	44137	75462	75462					0.15606016902279407
YGDLLLAGN	9	Unmodified	_YGDLLLAGN_					0	0	0		ENST00000554982.5_1_14:24031495-24032684:-|nuORF;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF;ENSG00000213983|ENST00000397120|AP1G2	ENST00000554982.5_1_14:24031495-24032684:-|nuORF	ENST00000554982.5_1_14:24031495-24032684:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.244873046875	2	468.245275	934.475997	0.22264	0.00010425	-1.244	-0.0005825	-1.0214	-0.00047825	468.24455399922584	105.74	1.8615	105.78	105.17	107.03	0.038322					109	43	4	0	0	0	0.64922	1	11565	11565		44.117	4.864	1	1899000			66397	8610	44119	44138	75463	75463					0.006137921435197313
YGDLLLAGN	9	Unmodified	_YGDLLLAGN_					0	0	0		ENST00000554982.5_1_14:24031495-24032684:-|nuORF;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF;ENSG00000213983|ENST00000397120|AP1G2	ENST00000554982.5_1_14:24031495-24032684:-|nuORF	ENST00000554982.5_1_14:24031495-24032684:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	468.245275	934.475997	-0.96702	-0.0004528	-0.0042433	-1.9869E-06	-0.97126	-0.00045479	468.24514745464245	105.75	1.401	105.91	105.43	106.84	0.15924	0.037694	0.001252	NaN	44.117	70	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1263800			66398	8610	44119	44138							0.006137921435197313
YGDLLLAGN	9	Unmodified	_YGDLLLAGN_					0	0	0		ENST00000554982.5_1_14:24031495-24032684:-|nuORF;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF;ENSG00000213983|ENST00000397120|AP1G2	ENST00000554982.5_1_14:24031495-24032684:-|nuORF	ENST00000554982.5_1_14:24031495-24032684:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	468.245275	934.475997	0.7719	0.00036144	-1.8169	-0.00085076	-1.045	-0.00048932	468.244305039693	105.85	1.4355	105.95	105.31	106.74	0.099007	0.081668	-0.00044553	NaN	44.117	75	35	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1074800			66399	8610	44119	44138							0.006137921435197313
YGDPVEPPTG	10	Unmodified	_YGDPVEPPTG_					0	0	0			REV__nc|ENSG00000106868|Q6UWL2-3|SUSD1	REV__nc|ENSG00000106868|Q6UWL2-3|SUSD1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	516.314208984375	2	516.237647	1030.46074	-0.047294	-2.4415E-05	2.1285	0.0010988	2.0812	0.0010744	516.2380156119864	99.396	0.48916	99.446	99.148	99.638	0.049828					15	11	3	0	0	0	0.37624	1	10557	10557		44.117	1.7207	1	148340	+		66400	17635	44120	44139	75464	75464					-0.053271194443368586
YGDQLGNNWTG	11	Unmodified	_YGDQLGNNWTG_					0	0	0			REV__ENSG00000149596|ENST00000372980|JPH2	REV__ENSG00000149596|ENST00000372980|JPH2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	612.8794555664062	2	612.767634	1223.52072	-1.2479	-0.00076468	2.7013	0.0016552	1.4534	0.00089057	612.7686307619376	104.63	0.50974	104.73	104.28	104.79	0.093857					19	12	2	0	0	0	0.17226	1	11025	11025		60.118	26.197	1	168220	+		66401	20184	44121	44140	75465	75465					-0.08210428781103474
YGEAAQLEETL	11	Unmodified	_YGEAAQLEETL_					0	0	0		ENST00000487440.5_1_3:47281337-47324087:-|nuORF;nc|ENSG00000088727|Q9HAQ2-2|KIF9;ENSG00000088727|ENST00000684063|KIF9	ENST00000487440.5_1_3:47281337-47324087:-|nuORF	ENST00000487440.5_1_3:47281337-47324087:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	407.5574645996094	3	408.531192	1222.57175	0.11704	4.7814E-05	-2.4174	-0.00098757	-2.3003	-0.00093976	408.5301803750142	30.946	0.30558	30.949	30.753	31.058	0.0037212					14	6	3	0	0	0	0.17243	1	2051	2051		17.167	3.0807	1	85883			66402	1592	44122	44141	75466	75466					-0.030635245268967992
YGEGCIAL	8	Unmodified	_YGEGCIAL_					0	0	0		nc|ENSG00000168918|Q92835-2|INPP5D;ENSG00000168918|ENST00000445964|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D	nc|ENSG00000168918|Q92835-2|INPP5D	nc|ENSG00000168918|Q92835-2|INPP5D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.193603515625	2	413.194196	824.37384	-0.086313	-3.5664E-05	-2.3678	-0.00097836	-2.4541	-0.001014	413.1936016248627	77.941	2.7232	78.504	78.093	80.816	0.56332					177	64	5	0	0	0	0.89457	1	8896	8896		37.028	7.1869	1	6380300			66403	6451	44123	44142	75467	75467					-0.0453719719973833
YGEIKIHVLKL	11	Unmodified	_YGEIKIHVLKL_					0	0	0		nc|ENSG00000143552|Q5VU65-2|NUP210L;ENSG00000143552|ENST00000368559|NUP210L	nc|ENSG00000143552|Q5VU65-2|NUP210L	nc|ENSG00000143552|Q5VU65-2|NUP210L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.27294921875	3	438.271096	1311.79146	2.0595	0.00090261	2.1338	0.00093518	4.1933	0.0018378	438.2719380139852	107.11	1.2259	107.15	106.67	107.9	0.035614					128	28	5	0	0	0	0.75121	1	11773	11773		21.78	0	1	4659700			66404	4643	44124	44143	75468	75468					0.14803370942127003
YGETIKILQL	10	Unmodified	_YGETIKILQL_					0	0	0		ENST00000437111.1_1_10:52389508-52390123:-|nuORF	ENST00000437111.1_1_10:52389508-52390123:-|nuORF	ENST00000437111.1_1_10:52389508-52390123:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3429565429688	2	589.344989	1176.67542	-0.36759	-0.00021664	-3.0824	-0.0018166	-3.45	-0.0020332	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.86218	1	9475	9475		32.812	1.2826	1	11103000			66405	11732	44125	44144	75469	75469					0.09415427371436635
YGFSSALG	8	Unmodified	_YGFSSALG_					0	0	0			REV__nc|ENSG00000091409|P23229-4|ITGA6	REV__nc|ENSG00000091409|P23229-4|ITGA6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	401.19354248046875	2	401.192511	800.370469	0.56679	0.00022739	0.74714	0.00029975	1.3139	0.00052714	401.1927338671488	82.307	0.68785	82.453	82.025	82.713	0.1455					28	15	2	0	0	0	0.86791	1	7898	7898		28.254	1.4582	1	176270	+		66406	17011	44126	44145	75470	75470					-0.03770123982087625
YGFSSFALD	9	Unmodified	_YGFSSFALD_					0	0	0			REV__ENST00000480675.5_1_1:45390817-45407328:-|nuORF	REV__ENST00000480675.5_1_1:45390817-45407328:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	503.26617431640625	2	503.729458	1005.44436	0.54972	0.00027691	-2.8984	-0.00146	-2.3487	-0.0011831	503.72778082887294	81.722	0.4664	82.222	82.111	82.577	0.49967					16	11	2	0	0	0	0.20789	1	9510	9510		31.955	17.818	1	158630	+		66407	27424	44127	44146	75471	75471					-0.05814200610416265
YGFSSFALD	9	Unmodified	_YGFSSFALD_					0	0	0			REV__ENST00000480675.5_1_1:45390817-45407328:-|nuORF	REV__ENST00000480675.5_1_1:45390817-45407328:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	503.729458	1005.44436	-0.61829	-0.00031145	-2.316	-0.0011666	-2.9343	-0.0014781	503.7281609601327	81.843	0.50615	82.269	82.08	82.587	0.42646	0.023448	0.00031522	NaN	23.042	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206760	+		66408	27424	44127	44146							-0.05814200610416265
YGFVSALVFLV	11	Unmodified	_YGFVSALVFLV_					0	0	0		ENSG00000125895|ENST00000429036|TMEM74B	ENSG00000125895|ENST00000429036|TMEM74B	ENSG00000125895|ENST00000429036|TMEM74B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5638732910156	3	405.565509	1213.6747	-0.18878	-7.6562E-05	-1.5614	-0.00063324	-1.7502	-0.00070981	405.5647434834523	63.548	1.2635	63.542	62.866	64.129	-0.0055504					132	55	3	0	0	0	0.69248	1	5929	5929		32.751	5.7032	1	257140			66409	3425	44128	44147	75472	75472					0.07640632722382179
YGFVSALVFLV	11	Unmodified	_YGFVSALVFLV_					0	0	0		ENSG00000125895|ENST00000429036|TMEM74B	ENSG00000125895|ENST00000429036|TMEM74B	ENSG00000125895|ENST00000429036|TMEM74B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	405.5646667480469	3	405.565509	1213.6747	-0.19603	-7.9504E-05	-1.74	-0.00070569	-1.936	-0.00078519	405.56469604882744	63.377	1.4802	63.343	62.79	64.27	-0.033714					141	56	3	0	0	0	0.75906	1	5999	5999		20.03	0.7678	1	328790			66410	3425	44128	44147	75473	75473					0.07640632722382179
YGFVSALVFLV	11	Unmodified	_YGFVSALVFLV_					0	0	0		ENSG00000125895|ENST00000429036|TMEM74B	ENSG00000125895|ENST00000429036|TMEM74B	ENSG00000125895|ENST00000429036|TMEM74B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	405.5645751953125	3	405.565509	1213.6747	0.39528	0.00016031	-2.2157	-0.00089861	-1.8204	-0.0007383	405.56450530615757	63.272	1.3532	63.394	62.754	64.107	0.12253					138	58	3	0	0	0	0.69248	1	5511	5511		32.751	3.1998	1	242080			66411	3425	44128	44147	75474	75474					0.07640632722382179
YGFVSALVFLV	11	Unmodified	_YGFVSALVFLV_					0	0	0		ENSG00000125895|ENST00000429036|TMEM74B	ENSG00000125895|ENST00000429036|TMEM74B	ENSG00000125895|ENST00000429036|TMEM74B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.8998718261719	3	405.565509	1213.6747	-1.0529	-0.00042701	-0.73902	-0.00029972	-1.7919	-0.00072674	405.5651485487608	63.261	1.4207	63.284	62.805	64.225	0.022984					129	62	3	0	0	0	0.75906	1	5567	5567		20.03	1.4994	1	264990			66412	3425	44128	44147	75475	75475					0.07640632722382179
YGHGCCES	8	Unmodified	_YGHGCCES_					0	0	0			REV__ENST00000579898.5_1_17:73491630-73491903:+|nuORF	REV__ENST00000579898.5_1_17:73491630-73491903:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	428.2615966796875	2	428.141638	854.268723	2.6333	0.0011274	-2.2491	-0.00096292	0.38425	0.00016451	428.14079876264	90.735	0.35226	90.782	90.555	90.908	0.046448					13	8	3	0	0	0	0.4196	1	9413	9413		13.775	4.3048	1	38681	+		66413	29035	44129	44148	75476	75476					-0.16424061667805745
YGHNIIKL	8	Unmodified	_YGHNIIKL_					0	0	0			REV__ENST00000306376.9_1_3:185765787-185765916:-|nuORF	REV__ENST00000306376.9_1_3:185765787-185765916:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	479.27813720703125	2	479.279452	956.544351	-1.1288	-0.000541	-3.1146	-0.0014928	-4.2434	-0.0020338	479.27782169458266	82.338	2.9744	82.338	80.535	83.509	0					252	84	4	0	0	0	0.85277	1	7599	7599		25.45	0	1	1311100	+		66414	24833	44130	44149	75477	75477					0.0643408151404401
YGHTKGLLL	9	Unmodified	_YGHTKGLLL_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.29022216796875	2	501.292559	1000.57057	-0.97974	-0.00049113	-3.1223	-0.0015652	-4.1021	-0.0020563	501.2908713245722	84.591	3.1389	84.591	82.563	85.701	0					228	75	4	0	0	0	0.47272	4	7916	7916;7949;8045;8093		53.351	14.545	1	2111000			66415	4251	44131	44150	75478;75479;75480;75481	75478					0.07030350685522535
YGHTKGLLL	9	Unmodified	_YGHTKGLLL_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	501.2904968261719	2	501.292559	1000.57057	-0.94239	-0.00047241	-3.1642	-0.0015862	-4.1066	-0.0020586	501.2908885645571	86.76	6.5813	86.76	85.618	92.199	0					464	153	5	0	0	0	0.62081	11	8666	8139;8293;8328;8460;8472;8484;8511;8642;8666;8679;8703		45.952	5.023	1	6939200			66416	4251	44131	44150	75482;75483;75484;75485;75486;75487;75488;75489;75490;75491;75492	75490					0.07030350685522535
YGHTKGLLL	9	Unmodified	_YGHTKGLLL_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.290283203125	2	501.292559	1000.57057	-0.064942	-3.2555E-05	-4.2261	-0.0021185	-4.291	-0.002151	501.2903172159093	84.529	3.2441	84.596	82.441	85.685	0.067169					245	74	4	0	0	0	0.67345	4	8470	8421;8470;8481;8578		42.396	8.8806	1	2854100			66417	4251	44131	44150	75493;75494;75495;75496	75494					0.07030350685522535
YGHTKGLLL	9	Unmodified	_YGHTKGLLL_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2900390625	2	501.292559	1000.57057	-0.52377	-0.00026256	-3.845	-0.0019275	-4.3688	-0.00219	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.51307	4	8609	8513;8537;8609;8645		51.335	14.889	1	2929300			66418	4251	44131	44150	75497;75498;75499;75500	75499					0.07030350685522535
YGHTKGLLL	9	Unmodified	_YGHTKGLLL_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.29034423828125	2	501.292559	1000.57057	-0.36653	-0.00018374	-3.8537	-0.0019318	-4.2202	-0.0021156	501.29054364116246	86.384	7.7859	86.439	85.02	92.806	0.055649					567	183	6	0	0	0	0.35373	16	9212	8837;8885;8909;8921;8945;8969;8981;9005;9043;9116;9128;9140;9152;9164;9212;9248		60.972	15.02	1	9903700			66419	4251	44131	44150	75501;75502;75503;75504;75505;75506;75507;75508;75509;75510;75511;75512;75513;75514;75515;75516	75515					0.07030350685522535
YGHTKGLLL	9	Unmodified	_YGHTKGLLL_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.290283203125	2	501.292559	1000.57057	-0.50774	-0.00025453	-3.8573	-0.0019337	-4.3651	-0.0021882	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.47272	3	8188	8188;8212;8286		53.351	22.848	1	3014100			66420	4251	44131	44150	75517;75518;75519	75517					0.07030350685522535
YGHTKGLLL	9	Unmodified	_YGHTKGLLL_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2908630371094	2	501.292559	1000.57057	-0.50311	-0.0002522	-3.7566	-0.0018832	-4.2597	-0.0021354	501.29056034508386	86.367	7.6245	86.561	85.5	93.124	0.19379					510	181	4	0	0	0	0.58668	19	8882	8345;8356;8380;8476;8560;8584;8608;8620;8656;8668;8693;8706;8786;8798;8833;8882;8904;8916;8941		47.657	10.498	1	10459000			66421	4251	44131	44150	75520;75521;75522;75523;75524;75525;75526;75527;75528;75529;75530;75531;75532;75533;75534;75535;75536;75537;75538	75535					0.07030350685522535
YGHTKGLLL	9	Unmodified	_YGHTKGLLL_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2900390625	2	501.292559	1000.57057	-1.4828	-0.00074334	-2.8745	-0.001441	-4.3573	-0.0021843	501.2909969907669	84.249	3.1034	84.398	82.434	85.537	0.14952					235	71	4	0	0	0	0.64922	7	8278	8098;8194;8206;8219;8255;8278;8290		44.117	13.226	1	2793500			66422	4251	44131	44150	75539;75540;75541;75542;75543;75544;75545	75544					0.07030350685522535
YGHTKGLLL	9	Unmodified	_YGHTKGLLL_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.29034423828125	2	501.292559	1000.57057	-1.5697	-0.00078686	-2.6476	-0.0013272	-4.2173	-0.0021141	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.51307	21	8553	8304;8326;8338;8481;8529;8553;8565;8577;8613;8637;8649;8676;8689;8713;8730;8742;8767;8790;8802;8838;8885		51.335	14.176	1	9242300			66423	4251	44131	44150	75546;75547;75548;75549;75550;75551;75552;75553;75554;75555;75556;75557;75558;75559;75560;75561;75562;75563;75564;75565;75566	75551					0.07030350685522535
YGHTKGLLL	9	Unmodified	_YGHTKGLLL_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	501.290283203125	2	501.292559	1000.57057	-0.28392	-0.00014233	-3.9733	-0.0019918	-4.2572	-0.0021341	501.29046274309405	86.338	4.9042	86.781	85.273	90.177	0.44331					364	119	4	0	0	0	0.71772	4	10487	10303;10426;10469;10487		39.253	6.4404	1	9038000			66424	4251	44131	44150	75567;75568;75569;75570	75570					0.07030350685522535
YGHTKGLLL	9	Unmodified	_YGHTKGLLL_					0	0	0		ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	ENSG00000137976|ENST00000370665|DNASE2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	501.2899475097656	2	501.292559	1000.57057	-0.45423	-0.0002277	-3.8659	-0.001938	-4.3202	-0.0021657	501.29055290746413	86.366	4.4525	86.821	85.67	90.123	0.45429					376	108	6	0	0	0	0.73802	4	10471	10036;10228;10312;10471		37.812	7.3764	1	9727400			66425	4251	44131	44150	75571;75572;75573;75574	75574					0.07030350685522535
YGIGTILGRL	10	Unmodified	_YGIGTILGRL_					0	0	0			REV__nc|ENSG00000041982|P24821-3|TNC	REV__nc|ENSG00000041982|P24821-3|TNC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8167724609375	2	531.818941	1061.62333	-1.264	-0.00067223	-2.5284	-0.0013447	-3.7925	-0.0020169	531.8174600088568	88.426	3.5408	88.897	87.86	91.401	0.47068					268	88	5	0	0	0	0.85934	1	10572	10572		35.618	0	1	4586300	+		66426	16324	44132	44151	75575	75575					0.09498308748334239
YGIICALPKR	10	Unmodified	_YGIICALPKR_					0	0	0			REV__ENST00000478602.1_1_2:42946162-42950180:+|nuORF	REV__ENST00000478602.1_1_2:42946162-42950180:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.8330688476562	2	567.328619	1132.64269	2.2449	0.0012736	0.57584	0.00032669	2.8208	0.0016003	567.3287840668619	112.58	0.43407	112.61	112.42	112.85	0.030602					36	17	3	0	0	0	0.86589	1	13616	13616		29.15	1.0681	1	111070	+		66427	16430	44133	44152	75576	75576					0.08166941767581193
YGIILTHGAS	10	Unmodified	_YGIILTHGAS_					0	0	0		nc|ENSG00000151287|Q5JUR7-2|TEX30;ENSG00000151287|ENST00000376032|TEX30	nc|ENSG00000151287|Q5JUR7-2|TEX30	nc|ENSG00000151287|Q5JUR7-2|TEX30	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.3136596679688	2	516.279649	1030.54475	0.87298	0.0004507	-0.86733	-0.00044778	0.0056503	2.9171E-06	516.2792217740932	99.131	0.82416	99.178	98.896	99.72	0.047531					38	19	3	0	0	0	0.37624	1	10636	10636		49.442	21.36	1	167360			66428	5105	44134	44153	75577	75577					0.030694564432451443
YGIILTHGAS	10	Unmodified	_YGIILTHGAS_					0	0	0		nc|ENSG00000151287|Q5JUR7-2|TEX30;ENSG00000151287|ENST00000376032|TEX30	nc|ENSG00000151287|Q5JUR7-2|TEX30	nc|ENSG00000151287|Q5JUR7-2|TEX30	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	516.31396484375	2	516.279649	1030.54475	-1.562	-0.00080642	3.1353	0.0016187	1.5733	0.00081228	516.2809906506865	99.113	0.74442	99.299	99.198	99.942	0.18582					30	17	2	0	0	0	0.37624	1	10332	10332		51.335	19.381	1	201640			66429	5105	44134	44153	75578	75578					0.030694564432451443
YGIIRLLSKH	10	Unmodified	_YGIIRLLSKH_					0	0	0		ENSG00000279012|ENST00000624187|OR51B2	ENSG00000279012|ENST00000624187|OR51B2	ENSG00000279012|ENST00000624187|OR51B2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	400.5806579589844	3	400.580152	1198.71863	-1.9294	-0.00077288	3.1532	0.0012631	1.2238	0.00049023	400.5812185024314	112.11	1.0204	112.09	111.8	112.82	-0.019882					97	31	4	0	0	0	0.8573	1	12032	12032		16.007	1.9208	1	9176900			66430	9040	44135	44154	75579	75579					0.1272166193934936
YGIREKIAL	9	Unmodified	_YGIREKIAL_					0	0	0			REV__ENSG00000196549|ENST00000360490|MME	REV__ENSG00000196549|ENST00000360490|MME	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8165893554688	2	531.818941	1061.62333	-0.033207	-1.766E-05	-3.353	-0.0017832	-3.3862	-0.0018009	531.8168202893885	86.612	2.9344	86.679	84.81	87.745	0.067444					207	67	4	0	0	0	0.67345	1	8687	8687		42.396	4.5846	1	1254600	+		66431	23144	44136	44155	75580	75580					0.09498308748311501
YGIREKIAL	9	Unmodified	_YGIREKIAL_					0	0	0			REV__ENSG00000196549|ENST00000360490|MME	REV__ENSG00000196549|ENST00000360490|MME	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	531.8192138671875	2	531.818941	1061.62333	-0.053058	-2.8217E-05	-4.021	-0.0021385	-4.0741	-0.0021667	531.816721948827	86.422	3.1148	86.616	84.506	87.621	0.19379					199	72	3	0	0	0	0.74721	2	8360	8360;8531		37.159	2.9866	1	1422300	+		66432	23144	44136	44155	75581;75582	75581					0.09498308748311501
YGIREKIAL	9	Unmodified	_YGIREKIAL_					0	0	0			REV__ENSG00000196549|ENST00000360490|MME	REV__ENSG00000196549|ENST00000360490|MME	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8170166015625	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.78536	1	8915	8915		29.15	1.2673	1	4022300	+		66433	23144	44136	44155	75583	75583					0.09498308748311501
YGIRVRVGR	9	Unmodified	_YGIRVRVGR_					0	0	0			REV__ENST00000298717.8_1_14:21979369-21979501:-|nuORF	REV__ENST00000298717.8_1_14:21979369-21979501:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	538.3265991210938	2	538.327799	1074.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.71	1	114.74	114.24	115.24	0.026466								0	0	0	0.34024	1	12565	12565		17.365	3.5896	1		+		66434	24736	44137	44156	75584	75584					0.10671068793840277
YGISARLLGL	10	Unmodified	_YGISARLLGL_					0	0	0			REV__ENST00000507765.1_1_4:6290695-6304192:+|nuORF	REV__ENST00000507765.1_1_4:6290695-6304192:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.8167724609375	2	531.818941	1061.62333	-0.033042	-1.7573E-05	-3.8759	-0.0020613	-3.909	-0.0020789	531.8167687930054	88.737	5.9366	88.805	87.358	93.294	0.068161					408	140	5	0	0	0	0.8608	1	9142	9142		34.173	2.6427	1	4208000	+		66435	17762	44138	44157	75585	75585					0.09498308748334239
YGISARLLGL	10	Unmodified	_YGISARLLGL_					0	0	0			REV__ENST00000507765.1_1_4:6290695-6304192:+|nuORF	REV__ENST00000507765.1_1_4:6290695-6304192:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.8170166015625	2	531.818941	1061.62333	-1.5109	-0.00080353	-2.4355	-0.0012952	-3.9464	-0.0020988	531.8175214767783	88.414	3.7413	88.587	87.569	91.311	0.17233					319	88	4	0	0	0	0.77314	2	8817	8724;8817		40.778	3.6191	1	4022300	+		66436	17762	44138	44157	75586;75587	75587					0.09498308748334239
YGIVGKSQTVL	11	Unmodified	_YGIVGKSQTVL_					0	0	0			REV__ENSG00000170927|ENST00000371117|PKHD1	REV__ENSG00000170927|ENST00000371117|PKHD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.833251953125	2	582.834788	1163.65502	0.7163	0.00041749	-4.2997	-0.002506	-3.5834	-0.0020885	582.8322944715994	93.943	3.3707	94.171	93.279	96.65	0.22863					214	80	3	0	0	0	0.64498	1	9668	9668		39.253	7.723	1	862210	+		66437	21700	44139	44158	75588	75588					0.07974256711599992
YGIYRPVSL	9	Unmodified	_YGIYRPVSL_					0	0	0		ENST00000367204.5_1_1:204095493-204095874:+|nuORF	ENST00000367204.5_1_1:204095493-204095874:+|nuORF	ENST00000367204.5_1_1:204095493-204095874:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	534.2938232421875	2	534.297842	1066.58113	-1.5022	-0.00080264	-4.4409	-0.0023727	-5.9431	-0.0031754	534.295427117142	88.335	3.7823	88.504	87.046	90.828	0.16923					157	88	2	0	0	0	0.78058	1	8761	8761		30.504	1.3336	1	483520			66438	10540	44140	44159	75589	75589					0.050503333399547046
YGKALEVLVK	10	Unmodified	_YGKALEVLVK_					0	0	0		ENST00000539934.5_1_12:124093257-124102497:+|nuORF;ENST00000542286.5_1_12:124093257-124104017:+|nuORF;ENSG00000111364|ENST00000238146|DDX55	ENST00000539934.5_1_12:124093257-124102497:+|nuORF	ENST00000539934.5_1_12:124093257-124102497:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3412475585938	2	560.342249	1118.66995	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.82	1	106.79	106.29	107.29	-0.034409								0	0	0	0.45132	1	11605	11605		23.523	1.5628	1				66439	2579	44141	44160	75590	75590					0.11535748579603933
YGKDKVGILQ	10	Unmodified	_YGKDKVGILQ_					0	0	0		ENSG00000151151|ENST00000373935|IPMK	ENSG00000151151|ENST00000373935|IPMK	ENSG00000151151|ENST00000373935|IPMK	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8199462890625	2	560.821681	1119.62881	-1.4169	-0.00079462	-1.874	-0.001051	-3.2909	-0.0018456	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.86218	1	9270	9270		32.812	2.3088	1	758020			66440	5099	44142	44161	75591	75591					0.07377987540144204
YGKIAVMEL	9	Unmodified	_YGKIAVMEL_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	512.2835083007812	2	512.280803	1022.54705	-0.88857	-0.0004552	1.958	0.0010031	1.0695	0.00054786	512.2817341917631	86.454	3.0125	86.454	85.618	88.63	0					129	69	2	0	0	0	0.76255	1	8219	8219		35.618	0	1	265310			66441	6350	44143	44162	75592	75592					0.03668168856700049
YGKIAVMEL	9	Unmodified	_YGKIAVMEL_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2811889648438	2	512.280803	1022.54705	-0.3427	-0.00017556	1.3496	0.0006914	1.0069	0.00051584	512.2814243636773	86.125	3.8841	86.31	84.842	88.726	0.18523					170	91	2	0	0	0	0.76255	1	8588	8588		35.618	0	1	381930			66442	6350	44143	44162	75593	75593					0.03668168856700049
YGKIFTPEL	9	Unmodified	_YGKIFTPEL_					0	0	0			REV__nc|ENSG00000168439|P31948-3|STIP1	REV__nc|ENSG00000168439|P31948-3|STIP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	534.294189453125	2	534.292225	1066.5699	0.72796	0.00038894	3.7701	0.0020143	4.4981	0.0024033	534.2941828355348	88.565	3.2008	88.715	87.555	90.756	0.15054					137	75	2	0	0	0	0.64922	1	8807	8807		44.117	3.3386	1	511660	+		66443	21487	44144	44163	75594	75594					0.03927511245797177
YGKILEVVGRY	11	Unmodified	_YGKILEVVGRY_					0	0	0		ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-3|MLH1	ENSG00000076242|ENST00000231790|MLH1	ENSG00000076242|ENST00000231790|MLH1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	648.8720703125	2	648.869163	1295.72377	1.6012	0.0010389	2.3515	0.0015258	3.9527	0.0025648	648.8707405027678	99.281	2.2066	99.504	98.61	100.82	0.22262					133	51	3	0	0	0	0.51007	1	10357	10357		51.193	3.2332	1	269640			66444	1353	44145	44164	75595	75595					0.08773921011334096
YGKILEVVGRY	11	Unmodified	_YGKILEVVGRY_					0	0	0		ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-3|MLH1	ENSG00000076242|ENST00000231790|MLH1	ENSG00000076242|ENST00000231790|MLH1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	648.869163	1295.72377	1.4579	0.00094601	1.9486	0.0012644	3.4065	0.0022104	648.8705851488155	99.032	2.2245	99.393	98.525	100.75	0.36136	-0.12157	-0.0011663	NaN	51.193	95	55	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	358790			66445	1353	44145	44164							0.08773921011334096
YGKILEVVGRY	11	Unmodified	_YGKILEVVGRY_					0	0	0		ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-3|MLH1	ENSG00000076242|ENST00000231790|MLH1	ENSG00000076242|ENST00000231790|MLH1	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	648.869163	1295.72377	3.487	0.0022626	-1.2275	-0.00079648	2.2596	0.0014662	648.869423661483	99.122	2.3891	99.485	98.644	101.03	0.36292	-0.029623	-0.005288	NaN	51.193	94	59	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	431520			66446	1353	44145	44164							0.08773921011334096
YGKKPKKEV	9	Unmodified	_YGKKPKKEV_					0	0	0		ENST00000437011.1_1_10:118509989-118510190:+|nuORF	ENST00000437011.1_1_10:118509989-118510190:+|nuORF	ENST00000437011.1_1_10:118509989-118510190:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	538.8282470703125	2	538.826766	1075.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.66	1	113.68	113.18	114.18	0.020027								0	0	0	0.3307	1	13722	13722		19.997	0	1				66447	11730	44146	44165	75596	75596					0.1041859526535518
YGKLKALINS	10	Unmodified	_YGKLKALINS_					0	0	0		ENSG00000075223|ENST00000265361|SEMA3C	ENSG00000075223|ENST00000265361|SEMA3C	ENSG00000075223|ENST00000265361|SEMA3C	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8301391601562	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.86348	1	9227	9227		31.53	7.0106	1	6402500			66448	1324	44147	44166	75597	75597					0.10094577919790026
YGKPPAGN	8	Unmodified	_YGKPPAGN_					0	0	0		ENST00000353704.2_2_9:35732607-35732757:+|nuORF	ENST00000353704.2_2_9:35732607-35732757:+|nuORF	ENST00000353704.2_2_9:35732607-35732757:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.2048034667969	2	402.205953	802.397353	-0.18632	-7.4938E-05	-0.51168	-0.0002058	-0.698	-0.00028074	402.20569515988933	98.659	2.0984	98.708	97.873	99.972	0.04982					129	48	4	0	0	0	0.87479	3	10385	10385;10493;10507		47.916	10.887	1	1555200			66449	10331	44148	44167	75598;75599;75600	75598					-0.011750153709044753
YGKPPAGN	8	Unmodified	_YGKPPAGN_					0	0	0		ENST00000353704.2_2_9:35732607-35732757:+|nuORF	ENST00000353704.2_2_9:35732607-35732757:+|nuORF	ENST00000353704.2_2_9:35732607-35732757:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	402.20562744140625	2	402.205953	802.397353	2.2889	0.00092062	-2.9581	-0.0011898	-0.66913	-0.00026913	402.20469632638094	98.499	3.236	98.444	96.673	99.909	-0.054817					141	75	3	0	0	0	0.89962	2	10623	10623;10636		38.806	5.9937	1	1723900			66450	10331	44148	44167	75601;75602	75601					-0.011750153709044753
YGKPPAGN	8	Unmodified	_YGKPPAGN_					0	0	0		ENST00000353704.2_2_9:35732607-35732757:+|nuORF	ENST00000353704.2_2_9:35732607-35732757:+|nuORF	ENST00000353704.2_2_9:35732607-35732757:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	402.20550537109375	2	402.205953	802.397353	3.1805	0.0012792	-3.8193	-0.0015361	-0.63874	-0.00025691	402.20435516833464	98.401	2.1792	98.45	97.455	99.634	0.048157					140	50	4	0	0	0	0.87479	4	10471	10448;10471;10506;10518		38.806	2.8053	1	1692900			66451	10331	44148	44167	75603;75604;75605;75606	75604					-0.011750153709044753
YGKPPAGN	8	Unmodified	_YGKPPAGN_					0	0	0		ENST00000353704.2_2_9:35732607-35732757:+|nuORF	ENST00000353704.2_2_9:35732607-35732757:+|nuORF	ENST00000353704.2_2_9:35732607-35732757:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	402.2045593261719	2	402.205953	802.397353	0.71827	0.00028889	-1.4095	-0.00056691	-0.69122	-0.00027801	402.2053297143551	98.983	1.9796	99.14	98.365	100.34	0.15659					105	45	3	0	0	0	0.87479	2	10336	10271;10336		38.806	5.2906	1	582630			66452	10331	44148	44167	75607;75608	75608					-0.011750153709044753
YGKPPAGN	8	Unmodified	_YGKPPAGN_					0	0	0		ENST00000353704.2_2_9:35732607-35732757:+|nuORF	ENST00000353704.2_2_9:35732607-35732757:+|nuORF	ENST00000353704.2_2_9:35732607-35732757:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	402.2053527832031	2	402.205953	802.397353	1.3419	0.00053973	-2.1505	-0.00086493	-0.80855	-0.0003252	402.2050843296539	98.494	1.2071	98.87	98.367	99.574	0.37679					57	29	3	0	0	0	0.89962	1	11902	11902		38.806	3.6054	1	1080300			66453	10331	44148	44167	75609	75609					-0.011750153709044753
YGLAKIVDLK	10	Unmodified	_YGLAKIVDLK_					0	0	0			REV__ENSG00000163162|ENST00000295317|RNF149	REV__ENSG00000163162|ENST00000295317|RNF149	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3405151367188	2	560.342249	1118.66995	-1.1289	-0.00063255	-2.4697	-0.0013839	-3.5985	-0.0020164	560.3407299796369	89.624	3.285	89.693	87.185	90.47	0.068703					185	76	4	0	0	0	0.80179	1	9173	9173		39.253	6.4404	1	1038600	+		66454	20888	44149	44168	75610	75610					0.11535748579581195
YGLAKIVDLK	10	Unmodified	_YGLAKIVDLK_					0	0	0			REV__ENSG00000163162|ENST00000295317|RNF149	REV__ENSG00000163162|ENST00000295317|RNF149	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3411865234375	2	560.342249	1118.66995	-1.4185	-0.00079484	-1.9304	-0.0010817	-3.3488	-0.0018765	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.85251	2	12311	12311;12379		27.882	1.1893	1	4071000	+		66455	20888	44149	44168	75611;75612	75611					0.11535748579581195
YGLALLQGKN	10	Unmodified	_YGLALLQGKN_					0	0	0		ENST00000395011.5_1_10:72060408-72060609:-|nuORF	ENST00000395011.5_1_10:72060408-72060609:-|nuORF	ENST00000395011.5_1_10:72060408-72060609:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	538.8065185546875	2	538.808574	1075.60259	0.74987	0.00040403	-4.2313	-0.0022799	-3.4814	-0.0018758	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.86452	1	9070	9070		30.504	3.7075	1	840570			66456	11085	44150	44169	75613	75613					0.06781718368688416
YGLFSKAVAH	10	Unmodified	_YGLFSKAVAH_					0	0	0			REV__nc|ENSG00000197653|Q8IVF4|DNAH10	REV__nc|ENSG00000197653|Q8IVF4|DNAH10	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	546.8399047851562	2	546.795466	1091.57638	-0.50025	-0.00027353	3.1157	0.0017036	2.6154	0.0014301	546.7987540742665	101.14	0.33376	101.14	100.95	101.28	0					9	7	2	0	0	0	0.37624	1	10299	10299		51.335	3.4199	1	41203	+		66457	23257	44151	44170	75614	75614					0.034254491971978496
YGLHDPPFC	9	Unmodified	_YGLHDPPFC_					0	0	0			REV__nc|ENSG00000004777|O14559-10|ARHGAP33	REV__nc|ENSG00000004777|O14559-10|ARHGAP33	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.32373046875	2	524.731477	1047.4484	-0.49314	-0.00025877	0.49349	0.00025895	0.00034315	1.8006E-07	525.2353329743693	30.223	0.17746	30.251	30.141	30.318	0.028618					5	3	2	0	0	0	0.20789	1	1960	1960		26.796	0	1	15358	+		66458	16062	44152	44171	75615	75615					-0.07342434388351649
YGLILAAS	8	Unmodified	_YGLILAAS_					0	0	0		ENST00000526606.1_3_11:46569951-46570578:-|nuORF;ENST00000314845.7_1_11:46569951-46612686:-|nuORF;ENST00000533727.5_1_11:46569951-46615452:-|nuORF	ENST00000526606.1_3_11:46569951-46570578:-|nuORF	ENST00000526606.1_3_11:46569951-46570578:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.23223876953125	2	404.234179	806.453805	-1.2631	-0.0005106	-2.2404	-0.00090563	-3.5035	-0.0014162	404.2330856183434	82.529	2.4032	82.529	81.258	83.662	0					126	65	3	0	0	0	0.86288	1	7711	7711		26.796	2.2921	1	248830			66459	9966	44153	44172	75616	75616					0.04283612465758324
YGLILAAS	8	Unmodified	_YGLILAAS_					0	0	0		ENST00000526606.1_3_11:46569951-46570578:-|nuORF;ENST00000314845.7_1_11:46569951-46612686:-|nuORF;ENST00000533727.5_1_11:46569951-46615452:-|nuORF	ENST00000526606.1_3_11:46569951-46570578:-|nuORF	ENST00000526606.1_3_11:46569951-46570578:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	404.232421875	2	404.234179	806.453805	-0.18723	-7.5686E-05	-2.7376	-0.0011067	-2.9249	-0.0011823	404.2329717015241	85.159	4.1876	85.226	83.126	87.314	0.067261					182	96	2	0	0	0	0.88915	1	8477	8477		35.201	1.6851	1	4185000			66460	9966	44153	44172	75617	75617					0.04283612465758324
YGLILAAS	8	Unmodified	_YGLILAAS_					0	0	0		ENST00000526606.1_3_11:46569951-46570578:-|nuORF;ENST00000314845.7_1_11:46569951-46612686:-|nuORF;ENST00000533727.5_1_11:46569951-46615452:-|nuORF	ENST00000526606.1_3_11:46569951-46570578:-|nuORF	ENST00000526606.1_3_11:46569951-46570578:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	404.2327880859375	2	404.234179	806.453805	0.59235	0.00023945	-3.5322	-0.0014278	-2.9398	-0.0011884	404.23265107447514	84.953	3.9329	85.101	83.23	87.163	0.14857					173	91	2	0	0	0	0.82464	1	8324	8324		21.702	1.2205	1	4227600			66461	9966	44153	44172	75618	75618					0.04283612465758324
YGLKSLATQWL	11	Unmodified	_YGLKSLATQWL_					0	0	0		ENST00000362072.7_1_11:113295347-113345971:-|nuORF	ENST00000362072.7_1_11:113295347-113345971:-|nuORF	ENST00000362072.7_1_11:113295347-113345971:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.3582763671875	2	640.355888	1278.69722	2.419	0.001549	2.1895	0.0014021	4.6085	0.0029511	640.3571811494909	99.541	2.3982	99.488	98.557	100.95	-0.053741					189	55	4	0	0	0	0.6921	1	10728	10728		32.812	2.4947	1	625580			66462	10503	44154	44173	75619	75619					0.0690223211997818
YGLKSLATQWL	11	Unmodified	_YGLKSLATQWL_					0	0	0		ENST00000362072.7_1_11:113295347-113345971:-|nuORF	ENST00000362072.7_1_11:113295347-113345971:-|nuORF	ENST00000362072.7_1_11:113295347-113345971:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	640.3598022460938	2	640.355888	1278.69722	1.5852	0.0010151	2.9459	0.0018864	4.5311	0.0029015	640.3576200524909	99.251	2.2821	99.474	98.655	100.94	0.22262					164	53	4	0	0	0	0.61369	1	10422	10422		42.864	5.0528	1	616450			66463	10503	44154	44173	75620	75620					0.0690223211997818
YGLKSLATQWL	11	Unmodified	_YGLKSLATQWL_					0	0	0		ENST00000362072.7_1_11:113295347-113345971:-|nuORF	ENST00000362072.7_1_11:113295347-113345971:-|nuORF	ENST00000362072.7_1_11:113295347-113345971:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.3587646484375	2	640.355888	1278.69722	0.92817	0.00059436	3.6966	0.0023671	4.6247	0.0029615	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.69248	1	10357	10357		32.751	5.7032	1	603720			66464	10503	44154	44173	75621	75621					0.0690223211997818
YGLLIGAVTR	10	Unmodified	_YGLLIGAVTR_					0	0	0			REV__nc|ENSG00000197847|A6NK97|SLC22A20P	REV__nc|ENSG00000197847|A6NK97|SLC22A20P	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	531.8167114257812	2	531.818941	1061.62333	-0.78788	-0.00041901	-2.967	-0.0015779	-3.7549	-0.0019969	531.8173248703562	86.733	2.5836	86.733	85.271	87.855	0					155	59	3	0	0	0	0.86305	1	8323	8323		31.955	0.42505	1	859730	+		66465	30141	44155	44174	75622	75622					0.09498308748334239
YGLLSLVVSAK	11	Unmodified	_YGLLSLVVSAK_					0	0	0			REV__ENSG00000157093|ENST00000287748|LYZL4	REV__ENSG00000157093|ENST00000287748|LYZL4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	575.34521484375	2	575.347532	1148.68051	0.61456	0.00035358	-3.9136	-0.0022517	-3.299	-0.0018981	575.3451796941858	98.405	2.0882	98.633	98.17	100.26	0.22787					146	48	5	0	0	0	0.72106	1	10258	10258		28.081	0.19925	1	2884500	+		66466	20526	44156	44175	75623	75623					0.11211731234061517
YGLMILLII	9	Unmodified	_YGLMILLII_					0	0	0		ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	524.8271484375	2	524.827389	1047.64023	0.82695	0.00043401	-0.94172	-0.00049424	-0.11477	-6.0234E-05	524.826769505368	102.16	1.0919	102.29	101.89	102.98	0.13523					72	26	3	0	0	0	0.7932	1	10693	10693		21.702	0	1	650470			66467	3466	44157	44176	75624	75624					0.11831093309933749
YGLMILLII	9	Unmodified	_YGLMILLII_					0	0	0		ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	524.827880859375	2	524.827389	1047.64023	-1.5341	-0.00080515	1.5176	0.00079648	-0.016535	-8.6779E-06	524.8280472672277	102.21	1.1307	102.34	101.89	103.02	0.13569					72	27	3	0	0	0	0.78292	1	10661	10661		29.842	7.8817	1	626370			66468	3466	44157	44176	75625	75625					0.11831093309933749
YGLMVVVF	8	Unmodified	_YGLMVVVF_					0	0	0		ENSG00000184698|ENST00000642046|OR51M1	ENSG00000184698|ENST00000642046|OR51M1	ENSG00000184698|ENST00000642046|OR51M1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	464.2528381347656	2	464.254057	926.493561	-1.1814	-0.00054845	1.1549	0.00053618	-0.026428	-1.2269E-05	464.2544929418842	84.218	4.5627	84.218	82.432	86.995	0					319	108	4	0	0	0	0.91333	1	8201	8201		43.626	6.5976	1	946850			66469	7639	44158	44177	75626	75626					0.027374161448278755
YGLNPFGKRV	10	Unmodified	_YGLNPFGKRV_					0	0	0			REV__ENSG00000103335|ENST00000301015|PIEZO1	REV__ENSG00000103335|ENST00000301015|PIEZO1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.8430786132812	2	575.822015	1149.62948	-1.0012	-0.00057649	-0.39758	-0.00022894	-1.3987	-0.00080543	575.8203716299802	93.532	0.24756	93.602	93.376	93.624	0.069595					8	5	2	0	0	0	0.37624	1	9718	9718		42.396	13.247	1	34562	+		66470	17405	44159	44178	75627	75627					0.060648269798548426
YGLPFPKN	8	Unmodified	_YGLPFPKN_					0	0	0		ENST00000487931.1_1_1:78444877-78481928:+|nuORF;ENSG00000162616|ENST00000370763|DNAJB4	ENST00000487931.1_1_1:78444877-78481928:+|nuORF	ENST00000487931.1_1_1:78444877-78481928:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	468.2554626464844	2	468.252903	934.491253	-0.24701	-0.00011566	4.3697	0.0020461	4.1227	0.0019305	468.25479155810393	81.956	2.8945	82.014	80.909	83.803	0.057808					126	66	2	0	0	0	0.87922	1	8318	8318		31.955	2.1133	1	193290			66471	5706	44160	44179	75628	75628					0.021387037313729707
YGLQKITLL	9	Unmodified	_YGLQKITLL_					0	0	0		ENST00000574210.5_1_17:2597327-2598221:-|nuORF;nc|ENSG00000132361|O75153|CLUH;ENSG00000132361|ENST00000651024|CLUH	ENST00000574210.5_1_17:2597327-2598221:-|nuORF	ENST00000574210.5_1_17:2597327-2598221:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	524.8265380859375	2	524.823692	1047.63283	2.9134	0.001529	3.0915	0.0016225	6.0049	0.0031515	524.8252495487536	99.271	4.6168	99.217	98.29	102.91	-0.053741					390	108	7	0	0	0	0.72402	1	10737	10737		38.806	3.1879	1	30867000			66472	3788	44161	44180	75629	75629					0.11092077033845271
YGLSLITLAF	10	Unmodified	_YGLSLITLAF_					0	0	0		nc|ENSG00000154258|Q8IUA7-4|ABCA9;nc|ENSG00000154258|Q8IUA7-3|ABCA9;ENSG00000154258|ENST00000340001|ABCA9;ENST00000461623.1_1_17:67029858-67045457:-|nuORF	nc|ENSG00000154258|Q8IUA7-4|ABCA9	nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	549.31787109375	2	549.3157	1096.61685	3.3171	0.0018221	0.28594	0.00015707	3.6031	0.0019792	549.3157779565678	101.02	2.3329	100.97	100.53	102.87	-0.052109					129	55	4	0	0	0	0.86201	1	11020	11020		24.203	1.1603	1	1991000			66473	5267	44162	44181	75630	75630					0.07240370796944262
YGLSLPPVR	9	Unmodified	_YGLSLPPVR_					0	0	0			REV__nc|ENSG00000188883|A4D1S0-2|KLRG2	REV__nc|ENSG00000188883|A4D1S0-2|KLRG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	501.2904357910156	2	501.292559	1000.57057	-0.52377	-0.00026256	-3.845	-0.0019275	-4.3688	-0.00219	501.2905309645727	84.264	3.1195	84.323	82.383	85.503	0.05925					260	71	5	0	0	0	0.78058	1	8622	8622		30.504	0	1	2929300	+		66474	23040	44163	44182	75631	75631					0.07030350685522535
YGLSLPPVR	9	Unmodified	_YGLSLPPVR_					0	0	0			REV__nc|ENSG00000188883|A4D1S0-2|KLRG2	REV__nc|ENSG00000188883|A4D1S0-2|KLRG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	501.2900085449219	2	501.292559	1000.57057	-0.50774	-0.00025453	-3.8573	-0.0019337	-4.3651	-0.0021882	501.29048624025137	84.255	3.282	84.431	82.242	85.524	0.17561					246	76	4	0	0	0	0.78536	1	8107	8107		29.15	0	1	3014100	+		66475	23040	44163	44182	75632	75632					0.07030350685522535
YGLSLPPVR	9	Unmodified	_YGLSLPPVR_					0	0	0			REV__nc|ENSG00000188883|A4D1S0-2|KLRG2	REV__nc|ENSG00000188883|A4D1S0-2|KLRG2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	501.2902526855469	2	501.292559	1000.57057	-1.5697	-0.00078686	-2.6476	-0.0013272	-4.2173	-0.0021141	501.29112914095776	86.347	5.8021	86.512	85.378	91.181	0.16473					461	136	5	0	0	0	0.78536	1	8517	8517		29.15	0	1	9242300	+		66476	23040	44163	44182	75633	75633					0.07030350685522535
YGLVFFVI	8	Unmodified	_YGLVFFVI_					0	0	0		ENST00000582377.1_1_17:11998936-12013832:+|nuORF	ENST00000582377.1_1_17:11998936-12013832:+|nuORF	ENST00000582377.1_1_17:11998936-12013832:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.27777099609375	2	479.275847	956.537141	-0.098426	-4.7173E-05	3.2737	0.001569	3.1753	0.0015218	479.27729030939486	82.226	3.0432	82.292	80.379	83.423	0.065918					234	72	4	0	0	0	0.88393	1	7978	7978		33.493	7.9189	1	1929800			66477	14113	44164	44183	75634	75634					0.05713348913616301
YGLVKPKR	8	Unmodified	_YGLVKPKR_					0	0	0			REV__nc|ENSG00000214787|Q96PG1-2|MS4A4E	REV__nc|ENSG00000214787|Q96PG1-2|MS4A4E	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8009033203125	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.81548	1	9667	9667		20.482	0.48506	1	7439400	+		66478	30200	44165	44184	75635	75635					0.1102236078503438
YGLVPLVVQHI	11	Unmodified	_YGLVPLVVQHI_					0	0	0			REV__nc|ENSG00000129317|Q9H0K6-2|PUS7L	REV__nc|ENSG00000129317|Q9H0K6-2|PUS7L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	619.371337890625	2	619.368798	1236.72304	1.27	0.0007866	3.6702	0.0022732	4.9402	0.0030598	619.3710394706492	101.41	0.94493	101.61	101.32	102.26	0.2058					77	22	4	0	0	0	0.72918	1	10645	10645		26.693	2.1737	1	2074300	+		66479	18818	44166	44185	75636	75636					0.11415126362271621
YGLWTLVDF	9	Unmodified	_YGLWTLVDF_					0	0	0			REV__ENSG00000158748|ENST00000289753|HTR6	REV__ENSG00000158748|ENST00000289753|HTR6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	557.2412109375	2	557.2844	1112.55425	0.91543	0.00051015	1.9999	0.0011145	2.9153	0.0016247	557.2857851194193	28.442	0.40417	28.418	28.115	28.519	-0.023556					10	8	2	0	0	0	0.20789	1	1361	1361		11.511	5.5899	1	18178	+		66480	20619	44167	44186	75637	75637					0.002472247287414575
YGMKLPILRS	10	Unmodified	_YGMKLPILRS_					0	0	0		ENSG00000110917|ENST00000228506|MLEC	ENSG00000110917|ENST00000228506|MLEC	ENSG00000110917|ENST00000228506|MLEC	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	589.3424682617188	2	589.341726	1176.6689	-0.65315	-0.00038493	2.3741	0.0013992	1.7209	0.0010142	589.342935884001	92.26	2.9346	92.305	90.346	93.28	0.045448					250	70	4	0	0	0	0.86047	1	9565	9565		23.523	0	1	5584100			66481	2551	44168	44187	75638	75638					0.08763210939059718
YGMPFGAP	8	Oxidation (M)	_YGM(Oxidation (M))PFGAP_		YGM(1)PFGAP		YGM(44)PFGAP	0	0	1			REV__nc|ENSG00000152102|A1KXE4-2|FAM168B	REV__nc|ENSG00000152102|A1KXE4-2|FAM168B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	428.1887512207031	2	428.188914	854.363275	0.56239	0.00024081	-1.0225	-0.00043781	-0.46008	-0.000197	428.188480846816	95.18	2.0833	95.6	94.977	97.06	0.41964					117	50	4	0	0	0	0.91333	1	11458	11458		43.626	18.176	1	1648300	+		66482	20284	44169	44188	75639	75639		303			-0.06973179854162481
YGNIFLVARR	10	Unmodified	_YGNIFLVARR_					0	0	0		ENSG00000146383|ENST00000275198|TAAR6	ENSG00000146383|ENST00000275198|TAAR6	ENSG00000146383|ENST00000275198|TAAR6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	604.84619140625	2	604.848564	1207.68258	-0.095899	-5.8004E-05	-3.879	-0.0023462	-3.9749	-0.0024042	604.846117051297	96.108	3.1148	96.155	95.25	98.365	0.047707					211	72	4	0	0	0	0.86589	1	10190	10190		29.15	2.4566	1	638500			66483	4840	44170	44189	75640	75640					0.08704204762489098
YGNIRYEDIH	10	Unmodified	_YGNIRYEDIH_					0	0	0		ENSG00000133138|ENST00000357242|TBC1D8B	ENSG00000133138|ENST00000357242|TBC1D8B	ENSG00000133138|ENST00000357242|TBC1D8B	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.06591796875	2	640.306926	1278.5993	2.7251	0.0017449	-2.6155	-0.0016747	0.10952	7.0126E-05	640.3050426264379	111.76	0.41566	111.74	111.51	111.92	-0.025414					19	15	2	0	0	0	0.37624	1	12355	12355		21.96	0	1	12673			66484	3864	44171	44190	75641	75641					-0.02885576476001006
YGNIVIQKKKY	11	Unmodified	_YGNIVIQKKKY_					0	0	0		ENSG00000175895|ENST00000315367|PLEKHF2	ENSG00000175895|ENST00000315367|PLEKHF2	ENSG00000175895|ENST00000315367|PLEKHF2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	451.9325866699219	3	451.934484	1352.78162	-0.99129	-0.000448	-2.9992	-0.0013554	-3.9905	-0.0018034	451.9330862164875	100.92	2.2384	100.92	100.04	102.28	0					149	53	4	0	0	0	0.76579	1	10272	10272		18.531	0.69791	1	534780			66485	7042	44172	44191	75642	75642					0.1193418293673858
YGPKGKVVSEN	11	Unmodified	_YGPKGKVVSEN_					0	0	0		nc|ENSG00000042813|Q9BS86-2|ZPBP	nc|ENSG00000042813|Q9BS86-2|ZPBP	nc|ENSG00000042813|Q9BS86-2|ZPBP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3425903320312	2	589.31422	1176.61389	0.80759	0.00047592	-1.0801	-0.0006365	-0.27248	-0.00016058	589.3125008664136	92.007	0.50859	92.229	92.065	92.574	0.22157					17	11	2	0	0	0	0.17415	1	9298	9298		33.922	0	1	52146			66486	14745	44173	44192	75643	75643					0.0326449567214695
YGPKLRKV	8	Unmodified	_YGPKLRKV_					0	0	0			REV__ENSG00000180817|ENST00000373232|PPA1	REV__ENSG00000180817|ENST00000373232|PPA1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	480.8013916015625	2	480.803094	959.591636	-0.92578	-0.00044512	-3.5812	-0.0017218	-4.5069	-0.0021669	480.80128078789676	95.599	3.1826	95.599	95.051	98.234	0					208	73	4	0	0	0	0.86288	1	9751	9751		26.796	6.3143	1	7439400	+		66487	22419	44174	44193	75644	75644					0.11022360785045748
YGPKLRKV	8	Unmodified	_YGPKLRKV_					0	0	0			REV__ENSG00000180817|ENST00000373232|PPA1	REV__ENSG00000180817|ENST00000373232|PPA1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	480.8010559082031	2	480.803094	959.591636	-1.6775	-0.00080655	-3.0612	-0.0014718	-4.7387	-0.0022784	480.8015235199806	95.169	4.0925	95.372	94.777	98.87	0.20242					287	95	5	0	0	0	0.86791	1	9948	9948		28.254	7.7724	1	17379000	+		66488	22419	44174	44193	75645	75645					0.11022360785045748
YGPLRQRR	8	Unmodified	_YGPLRQRR_					0	0	0			REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3033447265625	2	523.304324	1044.5941	1.0264	0.00053713	-2.6027	-0.001362	-1.5763	-0.00082486	523.3028355534825	86.39	2.9746	86.445	84.54	87.515	0.055649					266	68	6	0	0	0	0.86288	2	8928	8701;8928		31.955	4.0726	1	3817300	+		66489	24274	44175	44194	75646;75647	75647					0.07358209242693192
YGPLRQRR	8	Unmodified	_YGPLRQRR_					0	0	0			REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.303955078125	2	523.304324	1044.5941	1.2403	0.00064907	-2.4704	-0.0012928	-1.2301	-0.00064372	523.302929168532	91.415	2.5669	91.46	91.141	93.708	0.045448					111	60	2	0	0	0	0.87922	1	9560	9560		31.955	7.4357	1	1018700	+		66490	24274	44175	44194	75648	75648					0.07358209242693192
YGPLRQRR	8	Unmodified	_YGPLRQRR_					0	0	0			REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3031005859375	2	523.304324	1044.5941	1.2406	0.00064919	-2.449	-0.0012816	-1.2084	-0.00063237	523.3029395587585	101.08	1.4079	101.12	100.73	102.14	0.044815					78	33	4	0	0	0	0.86791	1	10914	10914		28.254	1.4582	1	1032400	+		66491	24274	44175	44194	75649	75649					0.07358209242693192
YGPLRQRR	8	Unmodified	_YGPLRQRR_					0	0	0			REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.302978515625	2	523.304324	1044.5941	-0.17027	-8.9103E-05	-1.1428	-0.00059802	-1.313	-0.00068712	523.3036223327587	91.376	2.6869	91.596	91.26	93.946	0.22013					111	63	2	0	0	0	0.884	1	9241	9241		33.516	0.70317	1	1188800	+		66492	24274	44175	44194	75650	75650					0.07358209242693192
YGPLRQRR	8	Unmodified	_YGPLRQRR_					0	0	0			REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3037109375	2	523.304324	1044.5941	0.71899	0.00037625	-2.2367	-0.0011705	-1.5177	-0.00079421	523.303066027022	88.527	6.2677	88.678	87.555	93.823	0.15055					516	149	6	0	0	0	0.884	1	9256	9256		33.516	3.1979	1	13442000	+		66493	24274	44175	44194	75651	75651					0.07358209242693192
YGPLRQRR	8	Unmodified	_YGPLRQRR_					0	0	0			REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3033447265625	2	523.304324	1044.5941	-1.4863	-0.0007778	-0.078507	-4.1083E-05	-1.5648	-0.00081888	523.3041395992976	86.431	3.1392	86.596	84.508	87.647	0.16473					252	72	4	0	0	0	0.87922	2	8524	8524;8535		33.516	0.42505	1	3566700	+		66494	24274	44175	44194	75652;75653	75652					0.07358209242693192
YGPLRQRR	8	Unmodified	_YGPLRQRR_					0	0	0			REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	523.3034057617188	2	523.304324	1044.5941	-1.5386	-0.00080516	0.013561	7.0963E-06	-1.525	-0.00079806	523.3042374738494	88.371	3.7004	88.542	87.568	91.269	0.17123					421	87	6	0	0	0	0.884	1	8608	8608		33.516	1.5607	1	12189000	+		66495	24274	44175	44194	75654	75654					0.07358209242693192
YGPLRQRR	8	Unmodified	_YGPLRQRR_					0	0	0			REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	REV__ENST00000249016.4_1_22:41075352-41075709:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.3035278320312	2	523.304324	1044.5941	-1.0823	-0.0005664	-0.2985	-0.00015621	-1.3809	-0.00072261	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.884	1	10570	10570		33.516	4.366	1	13160000	+		66496	24274	44175	44194	75655	75655					0.07358209242693192
YGPNPTMSNR	10	Unmodified	_YGPNPTMSNR_					0	0	0			REV__ENSG00000117713|ENST00000324856|ARID1A	REV__ENSG00000117713|ENST00000324856|ARID1A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.853271484375	2	568.761297	1135.50804	-1.1699	-0.00066537	2.9909	0.0017011	1.8211	0.0010358	568.7627516633198	102.4	0.11686	102.42	102.36	102.48	0.01989					4	2	2	0	0	0	0.37624	1	10975	10975		37.812	13.292	1	37613	+		66497	18279	44176	44195	75656	75656					-0.05429163445000995
YGPPGVGKTSI	11	Unmodified	_YGPPGVGKTSI_					0	0	0		ENST00000587552.5_1_19:5696605-5708411:-|nuORF;ENST00000590558.5_1_19:5692045-5712033:-|nuORF;nc|ENSG00000196365|P36776-3|LONP1;nc|ENSG00000196365|P36776-2|LONP1;ENSG00000196365|ENST00000360614|LONP1	ENST00000587552.5_1_19:5696605-5708411:-|nuORF	ENST00000587552.5_1_19:5696605-5708411:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	538.326904296875	2	538.292756	1074.57096	3.4387	0.0018511	0.85871	0.00046224	4.2975	0.0023133	538.2934003960611	101.27	0.12277	101.22	101.16	101.28	-0.049828					4	2	2	0	0	0	0.17387	1	11025	11025		37.812	8.6415	1	55147			66498	8044	44177	44196	75657	75657					0.036657256147236694
YGPPLPSLN	9	Unmodified	_YGPPLPSLN_					0	0	0		ENST00000512755.1_1_13:33101488-33110480:-|nuORF;ENSG00000244754|ENST00000267068|N4BP2L2;nc|ENSG00000244754|Q92802-2|N4BP2L2	ENST00000512755.1_1_13:33101488-33110480:-|nuORF	ENST00000512755.1_1_13:33101488-33110480:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	479.27740478515625	2	479.255643	956.496732	0.63691	0.00030524	4.02	0.0019266	4.6569	0.0022319	479.2589433917238	84.541	0.69295	84.689	84.473	85.166	0.14793					21	15	2	0	0	0	0.20789	1	8246	8246		37.159	20.686	1	93334			66499	8827	44178	44197	75658	75658					0.016743825231856135
YGPPPPGLLV	10	Unmodified	_YGPPPPGLLV_					0	0	0			REV__ENST00000606372.5_1_1:2263981-2323005:-|nuORF	REV__ENST00000606372.5_1_1:2263981-2323005:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	505.29266357421875	2	505.289485	1008.56442	-0.058143	-2.9379E-05	4.0641	0.0020536	4.006	0.0020242	505.291445253125	97.476	2.5316	97.533	97.032	99.564	0.056831					136	58	3	0	0	0	0.86786	1	10399	10399		26.796	2.2769	1	1323100	+		66500	18184	44179	44198	75659	75659					0.06047832454009949
YGPVFTNI	8	Unmodified	_YGPVFTNI_					0	0	0		nc|ENSG00000172296|Q9NUV7-2|SPTLC3;ENST00000476791.1_1_20:12989915-13030000:+|nuORF	nc|ENSG00000172296|Q9NUV7-2|SPTLC3	nc|ENSG00000172296|Q9NUV7-2|SPTLC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	455.7344055175781	2	455.737086	909.459619	0.11172	5.0914E-05	-4.3386	-0.0019773	-4.2269	-0.0019263	455.73489417508915	31.816	0.64461	31.828	31.495	32.14	0.011446					29	15	3	0	0	0	0.884	1	1742	1742		33.516	3.0119	1	114800			66501	12345	44180	44199	75660	75660					0.0012671097742895654
YGPWSRSAWW	10	Unmodified	_YGPWSRSAWW_					0	0	0			REV__ENST00000530973.1_1_11:65108994-65113348:+|nuORF	REV__ENST00000530973.1_1_11:65108994-65113348:+|nuORF	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	648.3928833007812	2	648.301447	1294.58834	0.02415	1.5656E-05	-1.0307	-0.00066817	-1.0065	-0.00065252	648.3013155648899	107.59	0.12583	107.59	107.48	107.61	0					4	2	2	0	0	0	0.37624	1	11191	11191		32.812	0	1	33870	+		66502	28291	44181	44200	75661	75661					-0.047169340596383336
YGQALAKLGHA	11	Unmodified	_YGQALAKLGHA_					0	0	0		ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENSG00000163931|ENST00000462138|TKT;nc|ENSG00000163931|P29401-2|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF	ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF	ENST00000461139.5_1_3:53259774-53265639:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	564.8106079101562	2	564.811648	1127.60874	-0.37649	-0.00021265	-1.4045	-0.00079326	-1.781	-0.0010059	564.8107495054859	109.87	1.7926	109.87	109.6	111.4	0					169	64	4	0	0	0	0.68378	1	11420	11420		34.173	1.3601	1	3988700			66503	5884;12206	44182	44201	75662	75662					0.050042366001889604
YGQFLVGLL	9	Unmodified	_YGQFLVGLL_					0	0	0			REV__ENSG00000204642|ENST00000259951|HLA-F	REV__ENSG00000204642|ENST00000259951|HLA-F	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	505.2917785644531	2	505.289485	1008.56442	0.77686	0.00039254	3.2589	0.0016467	4.0358	0.0020392	505.29100883966504	97.18	2.3666	97.343	96.835	99.202	0.16316					149	54	4	0	0	0	0.77546	1	10025	10025		31.955	0	1	1148700	+		66504	23513	44183	44202	75663	75663					0.06047832454021318
YGQKTVGWLFG	11	Unmodified	_YGQKTVGWLFG_					0	0	0			REV__ENST00000588708.5_1_19:38900682-38904049:-|nuORF	REV__ENST00000588708.5_1_19:38900682-38904049:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3810424804688	2	628.327131	1254.63971	6.6205	0.0041599	-3.9856	-0.0025043	2.6349	0.0016556	628.8262701382849	116.2	0.095322	116.16	116.12	116.22	-0.037872					6	4	2	0	0	0	0.18099	1	13950	13950		14.865	5.1592	1	12614	+		66505	21766	44184	44203	75664	75664					0.02257389914416308
YGQPCECHE	9	Unmodified	_YGQPCECHE_					0	0	0			REV__ENSG00000101680|ENST00000389658|LAMA1	REV__ENSG00000101680|ENST00000389658|LAMA1	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.1898803710938	2	533.191859	1064.36917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.126	1	82.24	81.74	82.74	0.11426								0	0	0	0.32159	1	7851	7851		23.042	3.6825	1		+		66506	17296	44185	44204	75665	75665					-0.1604444940483063
YGRAALSRKSL	11	Unmodified	_YGRAALSRKSL_					0	0	0			REV__ENSG00000168806|ENST00000305641|LCMT2	REV__ENSG00000168806|ENST00000305641|LCMT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	611.3577270507812	2	611.356754	1220.69895	-0.40504	-0.00024762	-0.069959	-4.277E-05	-0.475	-0.00029039	611.3568029775882	96.181	4.8039	96.247	95.224	100.03	0.06591					416	112	6	0	0	0	0.69931	1	10161	10161		31.634	2.4642	1	12417000	+		66507	21520	44186	44205	75666	75666					0.09743285928607293
YGRGLSKAVRA	11	Unmodified	_YGRGLSKAVRA_					0	0	0		ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A	ENSG00000042781|ENST00000307340|USH2A	ENSG00000042781|ENST00000307340|USH2A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	589.3433227539062	2	589.343646	1176.67274	-0.36759	-0.00021664	-0.80413	-0.00047391	-1.1717	-0.00069055	589.3430577057721	94.58	6.622	94.58	93.622	100.24	0					435	157	4	0	0	0	0.7144	1	9630	9630		29.17	2.4771	1	11103000			66508	938	44187	44206	75667	75667					0.09147016757151505
YGRGLSKAVRA	11	Unmodified	_YGRGLSKAVRA_					0	0	0		ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A	ENSG00000042781|ENST00000307340|USH2A	ENSG00000042781|ENST00000307340|USH2A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	589.3427124023438	2	589.343646	1176.67274	0.15554	9.1664E-05	-1.2615	-0.00074348	-1.106	-0.00065182	589.3427522503994	94.171	5.8176	94.606	93.468	99.286	0.43539					460	143	4	0	0	0	0.70737	1	11370	11370		30.318	1.1477	1	10540000			66509	938	44187	44206	75668	75668					0.09147016757151505
YGRHDLPT	8	Unmodified	_YGRHDLPT_					0	0	0			REV__ENSG00000185033|ENST00000411539|SEMA4B	REV__ENSG00000185033|ENST00000411539|SEMA4B	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	479.7393798828125	2	479.740691	957.466829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.225	1	29.256	28.756	29.756	0.030945								0	0	0	0.30045	1	1431	1431		40.573	6.4001	1		+		66510	22731	44188	44207	75669	75669					-0.013605564221506938
YGRKGRLKSL	10	Unmodified	_YGRKGRLKSL_					0	0	0		nc|ENSG00000165694|Q6ZUT3-2|FRMD7;ENSG00000165694|ENST00000298542|FRMD7	nc|ENSG00000165694|Q6ZUT3-2|FRMD7	nc|ENSG00000165694|Q6ZUT3-2|FRMD7	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	589.3425903320312	2	589.361839	1176.70913	0.80638	0.00047525	2.2243	0.0013109	3.0307	0.0017862	589.3632279080505	92.143	0.21223	92.365	92.192	92.404	0.22157					7	4	2	0	0	0	0.37624	1	9298	9298		20.947	2.6848	1	58440			66511	6114	44189	44208	75670	75670					0.12783893653841005
YGRKKEALEW	10	Unmodified	_YGRKKEALEW_					0	0	0		ENST00000464428.2_1_1:177898995-177929556:-|nuORF;ENST00000466953.6_1_1:177898995-177928232:-|nuORF;ENSG00000120341|ENST00000308284|SEC16B;nc|ENSG00000120341|Q96JE7-2|SEC16B	ENST00000464428.2_1_1:177898995-177929556:-|nuORF	ENST00000464428.2_1_1:177898995-177929556:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	640.3466186523438	2	640.343312	1278.67207	4.3956	0.0028147	0.90819	0.00058155	5.3038	0.0033963	640.343646089099	102.73	0.67924	103.03	102.81	103.49	0.29865					86	22	4	0	0	0	0.64457	1	12525	12525		47.657	3.2801	1	12674000			66512	3127	44190	44209	75671	75671					0.043881773174234695
YGRKQRPKT	9	Unmodified	_YGRKQRPKT_					0	0	0		nc|ENSG00000243943|Q96ME7-2|ZNF512;ENSG00000243943|ENST00000355467|ZNF512;ENST00000505973.1_1_2:27805995-27824299:+|nuORF	nc|ENSG00000243943|Q96ME7-2|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.329345703125	2	567.330539	1132.64652	-0.50942	-0.00028901	0.5149	0.00029212	0.0054817	3.1099E-06	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.67345	1	10565	10565		42.396	8.4745	1	5685000			66513	8815	44191	44210	75672	75672					0.08550747585650242
YGRRWLVL	8	Unmodified	_YGRRWLVL_					0	0	0		nc|ENSG00000138463|Q96SL1-2|SLC49A4;ENSG00000138463|ENST00000261038|SLC49A4	nc|ENSG00000138463|Q96SL1-2|SLC49A4	nc|ENSG00000138463|Q96SL1-2|SLC49A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.8168334960938	2	531.813993	1061.61343	1.595	0.00084823	3.7944	0.0020179	5.3894	0.0028661	531.815914678422	86.624	2.9249	86.55	84.67	87.595	-0.074005					173	67	3	0	0	0	0.86791	1	8976	8976		28.254	0.37203	1	1345000			66514	4299	44192	44211	75673	75673					0.08509165533587293
YGRRWLVL	8	Unmodified	_YGRRWLVL_					0	0	0		nc|ENSG00000138463|Q96SL1-2|SLC49A4;ENSG00000138463|ENST00000261038|SLC49A4	nc|ENSG00000138463|Q96SL1-2|SLC49A4	nc|ENSG00000138463|Q96SL1-2|SLC49A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8170776367188	2	531.813993	1061.61343	1.0705	0.00056928	4.463	0.0023735	5.5334	0.0029427	531.8162245116383	88.435	4.8319	88.884	87.35	92.182	0.44893					324	119	4	0	0	0	0.81548	1	10406	10406		20.482	0.48506	1	4490200			66515	4299	44192	44211	75674	75674					0.08509165533587293
YGRRWRRK	8	Unmodified	_YGRRWRRK_					0	0	0		ENSG00000250423|ENST00000691062|KIAA1210;nc|ENSG00000250423|Q9ULL0|KIAA1210;chrX:119116664-119123582|19|17.0|0.58|4.87|-|ENST00000402510|KIAA1210,KIAA1210;chrX:119109202-119116496|21|20.14|0.6|5.07|-|ENST00000402510|KIAA1210,KIAA1210;chrX:119108471-119109076|19|32.47|0.49|6.06|-|ENST00000402510|KIAA1210,KIAA1210;chrX:119105147-119108337|22|28.77|0.54|5.73|-|ENST00000402510|KIAA1210,KIAA1210;chrX:119096691-119104992|18|19.11|0.36|5.75|-|ENST00000402510|KIAA1210,KIAA1210;chrX:119089746-119093667|19|19.05|0.87|4.45|-|ENST00000402510|KIAA1210,KIAA1210	ENSG00000250423|ENST00000691062|KIAA1210	ENSG00000250423|ENST00000691062|KIAA1210	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	589.3424072265625	2	589.344315	1176.67408	-1.324	-0.0007803	-1.1044	-0.00065085	-2.4284	-0.0014312	589.3435127639934	94.154	6.6867	94.352	93.356	100.04	0.19827					499	157	4	0	0	0	0.88915	1	9424	9424		35.201	3.2459	1	17904000			66516	538	44193	44212	75675	75675					0.09280695636539349
YGRVEKVVI	9	Unmodified	_YGRVEKVVI_					0	0	0		nc|ENSG00000148680|P34969-3|HTR7;nc|ENSG00000148680|P34969-2|HTR7;ENSG00000148680|ENST00000336152|HTR7	nc|ENSG00000148680|P34969-3|HTR7	nc|ENSG00000148680|P34969-3|HTR7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.8167114257812	2	531.818941	1061.62333	0.49482	0.00026316	-4.4068	-0.0023436	-3.912	-0.0020805	531.8164975808926	86.291	2.8983	86.734	84.906	87.804	0.44331					152	70	3	0	0	0	0.78536	1	10084	10084		29.15	1.2673	1	1227700			66517	4976	44194	44213	75676	75676					0.09498308748334239
YGRVEKVVI	9	Unmodified	_YGRVEKVVI_					0	0	0		nc|ENSG00000148680|P34969-3|HTR7;nc|ENSG00000148680|P34969-2|HTR7;ENSG00000148680|ENST00000336152|HTR7	nc|ENSG00000148680|P34969-3|HTR7	nc|ENSG00000148680|P34969-3|HTR7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8165283203125	2	531.818941	1061.62333	-0.69524	-0.00036974	-3.1977	-0.0017006	-3.8929	-0.0020703	531.8171231503412	86.417	2.5605	86.872	85.283	87.844	0.45429					174	62	4	0	0	0	0.74721	1	10146	10146		37.159	6.8414	1	1296000			66518	4976	44194	44213	75677	75677					0.09498308748334239
YGRVLRFVL	9	Unmodified	_YGRVLRFVL_					0	0	0			REV__ENST00000199389.10_1_7:6098783-6098849:-|nuORF	REV__ENST00000199389.10_1_7:6098783-6098849:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	561.8455200195312	2	561.842751	1121.67095	1.4106	0.00079252	3.8171	0.0021446	5.2277	0.0029371	561.8447337891968	96.819	2.411	96.866	96.355	98.766	0.047798					140	55	5	0	0	0	0.7932	1	10250	10250		24.203	3.2558	1	1810100	+		66519	24092	44195	44214	75678	75678					0.11498007739169225
YGRVLRFVL	9	Unmodified	_YGRVLRFVL_					0	0	0			REV__ENST00000199389.10_1_7:6098783-6098849:-|nuORF	REV__ENST00000199389.10_1_7:6098783-6098849:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.8460083007812	2	561.842751	1121.67095	1.9082	0.0010721	3.5496	0.0019943	5.4578	0.0030664	561.8445473616424	96.586	1.6942	96.991	96.505	98.199	0.40498					103	40	4	0	0	0	0.7932	1	11612	11612		24.203	5.8783	1	1276200	+		66520	24092	44195	44214	75679	75679					0.11498007739169225
YGSAVTHI	8	Unmodified	_YGSAVTHI_					0	0	0		ENSG00000131446|ENST00000307826|MGAT1	ENSG00000131446|ENST00000307826|MGAT1	ENSG00000131446|ENST00000307826|MGAT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	424.218505859375	2	424.21906	846.423567	-1.7078	-0.00072449	0.68599	0.00029101	-1.0218	-0.00043348	424.2192991334227	101.86	1.3095	102.06	101.54	102.85	0.19484					57	31	2	0	0	0	0.89457	1	10713	10713		37.028	5.0736	1	1022300			66521	3732	44196	44215	75680	75680					-0.005787461994145815
YGSEVRVKRG	10	Unmodified	_YGSEVRVKRG_					0	0	0			REV__ENSG00000133030|ENST00000651222|MPRIP	REV__ENSG00000133030|ENST00000651222|MPRIP	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	575.8430786132812	2	575.820004	1149.62546	0.81332	0.00046833	4.1397	0.0023837	4.953	0.002852	575.8243888150158	93.885	0.55252	94.046	93.532	94.085	0.16119					17	12	2	0	0	0	0.37624	1	9506	9506		31.53	0	1	112700	+		66522	19051	44197	44216	75681	75681					0.05662737486136393
YGSFLKKLLR	10	Unmodified	_YGSFLKKLLR_					0	0	0			REV__ENSG00000101204|ENST00000370263|CHRNA4	REV__ENSG00000101204|ENST00000370263|CHRNA4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	612.8804321289062	2	612.876791	1223.73903	3.0905	0.0018941	1.401	0.00085862	4.4914	0.0027527	612.8774407741583	104.71	3.9916	104.67	103.85	107.84	-0.04039					302	94	6	0	0	0	0.86348	1	11687	11687		31.53	8.9502	1	48609000	+		66523	17254	44198	44217	75682	75682					0.1361083259919269
YGSFLKKLLR	10	Unmodified	_YGSFLKKLLR_					0	0	0			REV__ENSG00000101204|ENST00000370263|CHRNA4	REV__ENSG00000101204|ENST00000370263|CHRNA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	612.8803100585938	2	612.876791	1223.73903	1.1743	0.00071971	3.3242	0.0020373	4.4985	0.002757	612.878611922605	104.31	3.5817	104.48	103.81	107.39	0.17096					311	89	7	0	0	0	0.86763	1	11209	11209		26.693	1.1189	1	83708000	+		66524	17254	44198	44217	75683	75683					0.1361083259919269
YGSGLVLV	8	Unmodified	_YGSGLVLV_					0	0	0			REV__ENSG00000008311|ENST00000417368|AASS	REV__ENSG00000008311|ENST00000417368|AASS	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	404.2323303222656	2	404.234179	806.453805	-1.8251	-0.00073778	-1.1309	-0.00045714	-2.956	-0.0011949	404.23361808960476	84.9	3.9602	85.05	83.153	87.113	0.14952					158	91	2	0	0	0	0.82464	1	8196	8196		21.702	0.7554	1	3315300	+		66525	16135	44199	44218	75684	75684					0.04283612465769693
YGSIKLTGVLN	11	Unmodified	_YGSIKLTGVLN_					0	0	0			REV__ENSG00000167721|ENST00000301364|TSR1	REV__ENSG00000167721|ENST00000301364|TSR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	582.8331298828125	2	582.834788	1163.65502	-0.83199	-0.00048491	-2.8678	-0.0016715	-3.6998	-0.0021564	582.833101064783	94.369	3.0771	94.438	93.58	96.657	0.068336					177	72	3	0	0	0	0.65746	1	9907	9907		37.812	7.4938	1	796430	+		66526	21424	44200	44219	75685	75685					0.07974256711622729
YGSLLAKKIN	10	Unmodified	_YGSLLAKKIN_					0	0	0			REV__nc|ENSG00000089876|Q7L7V1-2|DHX32	REV__nc|ENSG00000089876|Q7L7V1-2|DHX32	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8304443359375	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.86718	1	8899	8899		27.882	0	1	3935500	+		66527	16978	44201	44220	75686	75686					0.10094577919812764
YGSLLAKKIN	10	Unmodified	_YGSLLAKKIN_					0	0	0			REV__nc|ENSG00000089876|Q7L7V1-2|DHX32	REV__nc|ENSG00000089876|Q7L7V1-2|DHX32	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	553.8298950195312	2	553.832049	1105.64954	0.28171	0.00015602	-3.633	-0.0020121	-3.3513	-0.001856	553.8299080679184	90.482	3.8718	90.699	89.437	93.309	0.21737					356	92	5	0	0	0	0.8608	1	8999	8999		34.173	5.023	1	6402500	+		66528	16978	44201	44220	75687	75687					0.10094577919812764
YGSLRAKWLK	10	Unmodified	_YGSLRAKWLK_					0	0	0			REV__nc|ENSG00000175216|Q14008-2|CKAP5	REV__nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	611.3549194335938	2	611.358765	1220.70298	0.93149	0.00056947	-4.4474	-0.002719	-3.516	-0.0021495	611.3560842580883	95.783	3.9941	96.187	95.298	99.293	0.40451					337	97	4	0	0	0	0.85934	3	11442	11442;11454;11490		35.618	5.3006	1	11629000	+		66529	22050	44202	44221	75688;75689;75690	75688					0.10145375422303005
YGSPILTLII	10	Unmodified	_YGSPILTLII_					0	0	0			REV__nc|ENSG00000112337|O00624-2|SLC17A2	REV__nc|ENSG00000112337|O00624-2|SLC17A2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	545.3164672851562	2	545.33135	1088.64815	0.14996	8.1777E-05	2.1429	0.0011686	2.2928	0.0012504	545.3321289185249	88.547	0.16405	88.754	88.667	88.831	0.2073					5	3	2	0	0	0	0.37624	1	8807	8807		44.117	30.663	1	57966	+		66530	17942	44203	44222	75691	75691					0.10736943831057033
YGSSGALR	8	Unmodified	_YGSSGALR_					0	0	0		CON__Q2HJF0	CON__Q2HJF0	CON__Q2HJF0	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	406.2481994628906	2	405.70886	809.403166	-1.8121	-0.00073518	0.96382	0.00039103	-0.84827	-0.00034415	405.70893240669204	89.198	0.68941	89.405	89.128	89.817	0.20731					20	15	2	0	0	0	0.4196	1	8935	8935		35.201	9.7505	1	89180		+	66531	611	44204	44223	75692	75692					-0.00915916859241861
YGSSRSIVRKI	11	Unmodified	_YGSSRSIVRKI_					0	0	0		ENSG00000066855|ENST00000262146|MTFR1;ENST00000424808.6_1_8:66582187-66620357:+|nuORF	ENSG00000066855|ENST00000262146|MTFR1	ENSG00000066855|ENST00000262146|MTFR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	422.5811767578125	3	422.582333	1264.72517	2.9692	0.0012547	-3.8305	-0.0016187	-0.86127	-0.00036396	422.58062707178027	97.728	3.629	97.776	96.312	99.941	0.048164					208	84	4	0	0	0	0.73621	1	10489	10489		25.126	3.3456	1	464700			66532	1169	44205	44224	75693	75693					0.10339555100085818
YGSVFLLVKRG	11	Unmodified	_YGSVFLLVKRG_					0	0	0			REV__nc|ENSG00000160326|Q9UGQ3-2|SLC2A6	REV__nc|ENSG00000160326|Q9UGQ3-2|SLC2A6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	619.8690795898438	2	619.866423	1237.71829	2.311	0.0014325	2.5285	0.0015673	4.8395	0.0029999	619.8678506331878	96.046	5.1067	95.99	95.022	100.13	-0.056381					381	119	5	0	0	0	0.69995	1	10258	10258		31.53	1.0262	1	4854700	+		66533	29969	44206	44225	75694	75694					0.10894242219501393
YGSVKTGYTI	10	Unmodified	_YGSVKTGYTI_					0	0	0		ENST00000446673.5_1_3:42544163-42573332:+|nuORF;nc|ENSG00000114812|P32241-4|VIPR1;nc|ENSG00000114812|P32241-5|VIPR1;ENSG00000114812|ENST00000325123|VIPR1;nc|ENSG00000114812|P32241-2|VIPR1;ENST00000473575.1_1_3:42555294-42568989:+|nuORF	ENST00000446673.5_1_3:42544163-42573332:+|nuORF	ENST00000446673.5_1_3:42544163-42573332:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3165283203125	2	544.784764	1087.55498	0.040962	2.2316E-05	0.27403	0.00014929	0.315	0.00017161	545.2863671928989	88.485	0.60545	88.934	88.595	89.2	0.44893					22	14	2	0	0	0	0.37624	1	10436	10436		45.972	3.5761	1	144870			66534	2791	44207	44226	75695	75695					0.014700193778253379
YGTEKLKYNK	10	Unmodified	_YGTEKLKYNK_					0	0	0			REV__nc|ENSG00000029363|Q9NYF8-3|BCLAF1	REV__nc|ENSG00000029363|Q9NYF8-3|BCLAF1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	622.3345336914062	2	622.337695	1242.66084	-0.27733	-0.0001726	-1.9307	-0.0012016	-2.208	-0.0013741	622.3363706288875	110.83	1.494	110.77	110.4	111.89	-0.059937					117	47	3	0	0	0	0.85251	1	12126	12126		19.997	10.814	1	419280	+		66535	16268	44208	44227	75696	75696					0.0492135522326862
YGTHNGNLPC	10	Unmodified	_YGTHNGNLPC_					0	0	0			REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20	REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	538.3265380859375	2	538.234916	1074.45528	0.068179	3.6696E-05	3.3754	0.0018168	3.4436	0.0018535	538.2370255657096	100.93	0.20026	101.13	101.04	101.24	0.2058					8	4	2	0	0	0	0.37624	1	10555	10555		49.442	0	1	104300	+		66536	20978	44209	44228	75697	75697					-0.07897121507789961
YGTIFTAWR	9	Unmodified	_YGTIFTAWR_					0	0	0		ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	ENSG00000188352|ENST00000338382|FOCAD	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	557.784912109375	2	557.787641	1113.56073	-0.92705	-0.0005171	-3.0134	-0.0016809	-3.9405	-0.002198	557.785921557231	36.217	2.1138	36.198	35.42	37.533	-0.018673					120	46	5	0	0	0	0.72402	1	2376	2376		38.806	0.052534	1	2817100			66537	7925	44210	44229	75698	75698					0.008491626801287566
YGTLVVRRR	9	Unmodified	_YGTLVVRRR_					0	0	0			REV__ENSG00000164080|ENST00000684192|RAD54L2	REV__ENSG00000164080|ENST00000684192|RAD54L2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3396606445312	2	560.340907	1118.66726	-1.4185	-0.00079484	0.46581	0.00026101	-0.95269	-0.00053383	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.7932	1	12850	12850		20.947	0	1	4071000	+		66538	21027	44211	44230	75699	75699					0.11267337965318802
YGTSHVAI	8	Unmodified	_YGTSHVAI_					0	0	0		ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	424.2187805175781	2	424.21906	846.423567	2.8621	0.0012142	-4.1607	-0.001765	-1.2985	-0.00055086	424.2172299005605	101.48	1.8959	101.53	100.85	102.75	0.044823					89	45	3	0	0	0	0.88915	1	10897	10897		35.201	6.0512	1	2047000			66539	789	44212	44231	75700	75700					-0.005787461994373189
YGVDKKRKR	9	Unmodified	_YGVDKKRKR_					0	0	0		ENSG00000104856|ENST00000221452|RELB;ENST00000509229.1_1_19:45535724-45537626:+|nuORF	ENSG00000104856|ENST00000221452|RELB	ENSG00000104856|ENST00000221452|RELB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	575.34521484375	2	575.346189	1148.67783	-1.0089	-0.00058045	2.4383	0.0014029	1.4294	0.00082242	575.3486096870474	98.837	5.2928	98.887	98.351	103.64	0.04982					239	125	5	0	0	0	0.77244	1	10511	10511		32.812	6.1195	1	4222200			66540	2155	44213	44232	75701	75701					0.10943320619730912
YGVDKKRKR	9	Unmodified	_YGVDKKRKR_					0	0	0		ENSG00000104856|ENST00000221452|RELB;ENST00000509229.1_1_19:45535724-45537626:+|nuORF	ENSG00000104856|ENST00000221452|RELB	ENSG00000104856|ENST00000221452|RELB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	575.345458984375	2	575.346189	1148.67783	0.97572	0.00056137	-1.9131	-0.0011007	-0.93739	-0.00053933	575.3449806461122	98.555	2.3295	98.603	98.055	100.38	0.048157					165	53	5	0	0	0	0.77244	1	10572	10572		32.812	2.3088	1	4316200			66541	2155	44213	44232	75702	75702					0.10943320619730912
YGVIVVVKSA	10	Unmodified	_YGVIVVVKSA_					0	0	0			REV__ENST00000331585.6_1_2:196447906-196448179:-|nuORF	REV__ENST00000331585.6_1_2:196447906-196448179:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	517.81884765625	2	517.815867	1033.61718	2.0914	0.001083	4.1108	0.0021286	6.2022	0.0032116	517.8178511070294	93.15	1.5079	93.088	92.634	94.142	-0.06144					97	35	4	0	0	0	0.8608	1	9889	9889		34.173	0	1	1071700	+		66542	25130	44214	44233	75703	75703					0.10171790516801593
YGVLGTRELL	10	Unmodified	_YGVLGTRELL_					0	0	0		nc|ENSG00000102780|Q86XP1-5|DGKH;nc|ENSG00000102780|Q86XP1-3|DGKH;nc|ENSG00000102780|Q86XP1-2|DGKH;ENSG00000102780|ENST00000337343|DGKH	nc|ENSG00000102780|Q86XP1-5|DGKH	nc|ENSG00000102780|Q86XP1-5|DGKH	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	560.8202514648438	2	560.821681	1119.62881	-0.54677	-0.00030664	-2.8297	-0.001587	-3.3765	-0.0018936	560.8199785678084	92.712	2.8078	92.712	91.633	94.44	0					188	64	4	0	0	0	0.86718	1	9166	9166		27.882	0.83493	1	408930			66543	2017	44215	44234	75704	75704					0.07377987540144204
YGVRPPELPQL	11	Unmodified	_YGVRPPELPQL_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.892578125	2	634.853512	1267.69247	-0.13275	-8.4278E-05	4.0304	0.0025587	3.8976	0.0024744	634.8544883320151	105.62	0.20929	105.6	105.45	105.66	-0.025146					6	4	2	0	0	0	0.15819	1	11421	11421		60.118	12.159	1	74966	+		66544	17017	44216	44235	75705	75705					0.0693334797724674
YGVSFAIL	8	Unmodified	_YGVSFAIL_					0	0	0			REV__ENSG00000277932|ENST00000610445|OR52E5	REV__ENSG00000277932|ENST00000610445|OR52E5	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	435.2514343261719	2	435.242004	868.469455	0.54176	0.0002358	-3.8277	-0.001666	-3.286	-0.0014302	435.24029174123297	79.221	0.1031	79.359	79.301	79.404	0.13883					4	2	2	0	0	0	0.4196	1	7510	7510		21.702	3.3779	1	50847	+		66545	24027	44217	44236	75706	75706					0.0299589898281738
YGVTEVVTLKL	11	Unmodified	_YGVTEVVTLKL_					0	0	0			REV__ENSG00000154997|ENST00000388975|SEPTIN14	REV__ENSG00000154997|ENST00000388975|SEPTIN14	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3555908203125	2	611.358096	1220.70164	0.8676	0.00053041	-3.483	-0.0021294	-2.6154	-0.001599	611.3560720152175	95.924	5.0581	96.087	95.071	100.13	0.16317					363	118	6	0	0	0	0.69995	1	9799	9799		31.53	5.9558	1	16539000	+		66546	20411	44218	44237	75707	75707					0.1001169654291516
YGVVAVSL	8	Unmodified	_YGVVAVSL_					0	0	0			REV__ENST00000424746.1_1_22:41184916-41185198:-|nuORF	REV__ENST00000424746.1_1_22:41184916-41185198:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.2328186035156	2	404.234179	806.453805	-1.2204	-0.00049332	-1.5408	-0.00062286	-2.7612	-0.0011162	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.81548	1	8062	8062		20.482	0	1	2752600	+		66547	26523	44219	44238	75708	75708					0.04283612465758324
YGWNFTECTQ	10	Unmodified	_YGWNFTECTQ_					0	0	0		ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-3|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	ENSG00000070915|ENST00000563236|SLC12A3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	624.752685546875	2	624.753138	1247.49172	-0.73456	-0.00045892	0.50404	0.0003149	-0.23052	-0.00014402	624.7533277795804	30.041	0.5738	30.07	29.876	30.45	0.028618					28	12	3	0	0	0	0.86338	1	1952	1952		26.693	9.9755	1	355160			66548	1253	44220	44239	75709	75709					-0.12212289401736598
YGYRRFEKDIE	11	Unmodified	_YGYRRFEKDIE_					0	0	0		ENSG00000163728|ENST00000296015|TTC14	ENSG00000163728|ENST00000296015|TTC14	ENSG00000163728|ENST00000296015|TTC14	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	492.5821533203125	3	492.580769	1474.72048	0.64269	0.00031658	1.3926	0.00068597	2.0353	0.0010025	492.5814923987572	24.962	0.56425	25.012	24.703	25.268	0.050453					41	17	3	0	0	0	0.75121	1	963	963		21.78	6.4429	1	88314			66549	5858	44221	44240	75710	75710					0.0021062616667677503
YHCCWNTSYC	10	Unmodified	_YHCCWNTSYC_					0	0	0		nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;ENSG00000015171|ENST00000381604|ZMYND11	nc|ENSG00000015171|Q15326-5|ZMYND11	nc|ENSG00000015171|Q15326-5|ZMYND11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	640.2183837890625	2	640.220094	1278.42563	-0.071786	-4.5959E-05	-3.1262	-0.0020015	-3.198	-0.0020474	640.2177573110653	75.448	0.65024	75.494	75.238	75.889	0.045959					47	19	3	0	0	0	0.85934	1	7252	7252		35.618	4.0885	1	279790			66550	821	44222	44241	75711	75711					-0.20244144839784894
YHCCWNTSYC	10	Unmodified	_YHCCWNTSYC_					0	0	0		nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;ENSG00000015171|ENST00000381604|ZMYND11	nc|ENSG00000015171|Q15326-5|ZMYND11	nc|ENSG00000015171|Q15326-5|ZMYND11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	640.218017578125	2	640.220094	1278.42563	-0.34432	-0.00022044	-3.149	-0.002016	-3.4933	-0.0022365	640.2178944674888	75.405	0.73113	75.359	75.092	75.824	-0.045982					45	18	3	0	0	0	0.46422	2	7453	7439;7453		58.782	32.089	1	338550			66551	821	44222	44241	75712;75713	75713					-0.20244144839784894
YHCCWNTSYC	10	Unmodified	_YHCCWNTSYC_					0	0	0		nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;ENSG00000015171|ENST00000381604|ZMYND11	nc|ENSG00000015171|Q15326-5|ZMYND11	nc|ENSG00000015171|Q15326-5|ZMYND11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	640.2175903320312	2	640.220094	1278.42563	0.6861	0.00043926	-4.2796	-0.0027399	-3.5935	-0.0023006	640.2171834020843	75.206	0.73814	75.251	74.98	75.718	0.04509					44	19	3	0	0	0	0.82886	1	7307	7307		37.812	1.3648	1	294030			66552	821	44222	44241	75714	75714					-0.20244144839784894
YHCCWNTSYC	10	Unmodified	_YHCCWNTSYC_					0	0	0		nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;ENSG00000015171|ENST00000381604|ZMYND11	nc|ENSG00000015171|Q15326-5|ZMYND11	nc|ENSG00000015171|Q15326-5|ZMYND11	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.218505859375	2	640.220094	1278.42563	-0.71196	-0.00045581	-2.5432	-0.0016282	-3.2551	-0.002084	640.218255317839	75.358	0.69984	75.446	75.146	75.846	0.087639					38	17	3	0	0	0	0.74274	2	6963	6963;6992		42.396	9.5837	1	351800			66553	821	44222	44241	75715;75716	75715					-0.20244144839784894
YHDHHLRRLLL	11	Unmodified	_YHDHHLRRLLL_					0	0	0		ENST00000557436.1_1_14:52781063-52793955:+|nuORF	ENST00000557436.1_1_14:52781063-52793955:+|nuORF	ENST00000557436.1_1_14:52781063-52793955:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	491.1860046386719	3	491.612626	1471.81605	-2.4525	-0.0012057	3.8687	0.0019019	1.4162	0.00069624	491.61449370440727	64.54	0.36522	64.567	64.346	64.711	0.027145					22	9	3	0	0	0	0.17911	1	6059	6059		9.2118	0	1	58716			66554	13773	44223	44242	75717	75717					0.09901443868238857
YHDHHLRRLLL	11	Unmodified	_YHDHHLRRLLL_					0	0	0		ENST00000557436.1_1_14:52781063-52793955:+|nuORF	ENST00000557436.1_1_14:52781063-52793955:+|nuORF	ENST00000557436.1_1_14:52781063-52793955:+|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	491.1849365234375	3	491.612626	1471.81605	-0.68991	-0.00033917	2.2148	0.0010888	1.5249	0.00074966	491.6136436239025	64.317	0.44246	64.437	64.254	64.696	0.12005					26	14	2	0	0	0	0.17375	1	5674	5674		30.569	14.039	1	127580			66555	13773	44223	44242	75718	75718					0.09901443868238857
YHDKIIRKS	9	Unmodified	_YHDKIIRKS_					0	0	0			REV__nc|ENSG00000278023|Q8NG50-7|RDM1	REV__nc|ENSG00000278023|Q8NG50-7|RDM1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	580.3328247070312	2	580.332747	1158.65094	0.35844	0.00020801	-0.70205	-0.00040742	-0.34361	-0.00019941	580.3322580000553	39.826	0.82263	39.779	39.423	40.245	-0.04789					54	21	4	0	0	0	0.77696	1	2512	2512		31.53	2.3803	1	1097600	+		66556	30274	44224	44243	75719	75719					0.07796212008588554
YHEVFPHPQL	10	Unmodified	_YHEVFPHPQL_					0	0	0		ENST00000548070.1_1_12:101801029-101801257:-|nuORF	ENST00000548070.1_1_12:101801029-101801257:-|nuORF	ENST00000548070.1_1_12:101801029-101801257:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	633.81396484375	2	633.81693	1265.61931	-0.74532	-0.0004724	-2.3015	-0.0014587	-3.0468	-0.0019311	633.8153934693904	75.753	0.80846	75.841	75.424	76.232	0.087639					62	21	4	0	0	0	0.64457	1	7036	7036		47.657	1.6851	1	337910			66557	13616	44225	44244	75720	75720					-0.0028778074540696252
YHLPYKGEPG	10	Unmodified	_YHLPYKGEPG_					0	0	0			REV__ENSG00000198720|ENST00000394859|ANKRD13B	REV__ENSG00000198720|ENST00000394859|ANKRD13B	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	580.7902221679688	2	580.790381	1159.56621	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.38	1	19.305	18.805	19.805	-0.074974								0	0	0	0.45132	1	415	415		21.96	0	1		+		66558	23363	44226	44245	75721	75721					-0.0071915852806796465
YHPTPLRW	8	Unmodified	_YHPTPLRW_					0	0	0			REV__chr3:106926196-106927835|20|15.85|0.0|12.7|-|0|TE_info:HERVH-int,HERVH-int_dup1181,ERV1,LTR,acceptor,-,106925057,106926196|None,LINC00882|6	REV__chr3:106926196-106927835|20|15.85|0.0|12.7|-|0|TE_info:HERVH-int,HERVH-int_dup1181,ERV1,LTR,acceptor,-,106925057,106926196|None,LINC00882|6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	534.2943115234375	2	535.282526	1068.5505	1.157	0.00061932	-2.7915	-0.0014943	-1.6345	-0.00087494	535.2805633828561	88.404	1.7589	88.454	87.857	89.616	0.050415					71	41	2	0	0	0	0.4196	1	9099	9099		26.796	3.7536	1	118490	+		66559	15795	44227	44246	75722	75722					0.018965997455325123
YHRKQVLAQQS	11	Unmodified	_YHRKQVLAQQS_					0	0	0			REV__ENST00000567372.1_1_18:65945123-65945423:-|nuORF	REV__ENST00000567372.1_1_18:65945123-65945423:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	453.2484436035156	3	453.249354	1356.72623	-0.33158	-0.00015029	0.30091	0.00013639	-0.030672	-1.3902E-05	453.24944205426203	24.005	1.7673	23.959	23.523	25.29	-0.04598					97	41	4	0	0	0	0.6396	1	884	884		39.873	2.2733	1	180870	+		66560	18200	44228	44247	75723	75723					0.062137694689681666
YHTVSTATAQ	10	Unmodified	_YHTVSTATAQ_					0	0	0			REV__ENST00000348165.9_1_7:157061144-157061258:+|nuORF	REV__ENST00000348165.9_1_7:157061144-157061258:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.763916015625	2	539.76182	1077.50909	-0.19136	-0.00010329	3.7004	0.0019973	3.5091	0.0018941	539.7638105225585	76.472	0.49599	76.521	76.263	76.759	0.049187					24	16	2	0	0	0	0.86272	1	7406	7406		24.519	0.31644	1	80988	+		66561	25327	44229	44248	75724	75724					-0.02656625804434043
YHVPRKIL	8	Unmodified	_YHVPRKIL_					0	0	0			REV__ENST00000357385.7_1_17:79857297-79857938:+|nuORF	REV__ENST00000357385.7_1_17:79857297-79857938:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.3181762695312	2	513.316369	1024.61818	-0.36813	-0.00018897	1.0583	0.00054322	0.69013	0.00035425	513.3169589115231	53.646	1.4284	53.622	52.782	54.21	-0.024754					61	35	3	0	0	0	0.86791	1	4793	4793		28.254	1.5614	1	246220	+		66562	25410	44230	44249	75725	75725					0.10686049676360199
YIAANIKDVI	10	Unmodified	_YIAANIKDVI_					0	0	0			REV__nc|ENSG00000137474|Q13402-5|MYO7A	REV__nc|ENSG00000137474|Q13402-5|MYO7A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	560.2698364257812	2	560.324057	1118.63356	0.69011	0.00038669	-1.3465	-0.00075447	-0.65638	-0.00036779	560.3233850027752	49.398	0.36218	50.243	50.074	50.436	0.845					11	8	2	0	0	0	0.37624	1	4804	4804		37.812	22.17	1	242910	+		66563	19385	44231	44250	75726	75726					0.07898871682891695
YIAEDCANQ	9	Unmodified	_YIAEDCANQ_					0	0	0			REV__ENSG00000100504|ENST00000216392|PYGL;REV__ENSG00000100994|ENST00000216962|PYGB	REV__ENSG00000100504|ENST00000216392|PYGL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	513.7113037109375	2	513.713482	1025.41241	-0.025911	-1.3311E-05	-3.5254	-0.001811	-3.5513	-0.0018244	513.711552203164	35.018	0.52916	35.006	34.807	35.336	-0.012203					21	13	2	0	0	0	0.78536	1	2145	2145		29.15	0	1	66461	+		66564	17199;17235	44232	44251	75727	75727					-0.09927936355893507
YIAEDCANQ	9	Unmodified	_YIAEDCANQ_					0	0	0			REV__ENSG00000100504|ENST00000216392|PYGL;REV__ENSG00000100994|ENST00000216962|PYGB	REV__ENSG00000100504|ENST00000216392|PYGL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.7116088867188	2	513.713482	1025.41241	-0.96229	-0.00049434	-2.6806	-0.0013771	-3.6429	-0.0018714	513.7120873161073	35.028	0.42018	35.035	34.83	35.25	0.0063934					20	10	2	0	0	0	0.64922	1	2184	2184		44.117	1.7207	1	72580	+		66565	17199;17235	44232	44251	75728	75728					-0.09927936355893507
YIAKKVLNTG	10	Unmodified	_YIAKKVLNTG_					0	0	0			REV__nc|ENSG00000139977|Q147X3-2|NAA30	REV__nc|ENSG00000139977|Q147X3-2|NAA30	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8302001953125	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.86471	1	8744	8744		30.318	1.1477	1	3935500	+		66566	19587	44233	44252	75729	75729					0.10094577919812764
YIDEGRLVL	9	Unmodified	_YIDEGRLVL_					0	0	0		nc|ENSG00000057252|P35610-3|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;ENSG00000057252|ENST00000367619|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	nc|ENSG00000057252|P35610-3|SOAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	539.3045654296875	2	539.300581	1076.58661	-0.88218	-0.00047576	0.083037	4.4782E-05	-0.79914	-0.00043098	539.3003993125719	60.567	0.56427	61.12	60.855	61.419	0.55323					30	15	3	0	0	0	0.21969	1	6437	6437		71.877	11.584	1	1132800			66567	1036	44234	44253	75730	75730					0.05138012131760661
YIDRIHIFFRF	11	Unmodified	_YIDRIHIFFRF_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.9498596191406	3	509.613744	1525.8194	-1.755	-0.00089438	3.7542	0.0019132	1.9992	0.0010188	509.61555556193184	28.54	1.0683	28.54	27.927	28.995	0					107	46	3	0	0	0	0.73277	1	1153	1153		25.892	15.788	1	157640			66568	6918	44235	44254	75731	75731					0.07752693922179787
YIDSCASPN	9	Carbamidomethyl (C)	_YIDSC(Carbamidomethyl (C))ASPN_	YIDSC(1)ASPN		YIDSC(48)ASPN		0	1	0			REV__ENSG00000166024|ENST00000298999|R3HCC1L	REV__ENSG00000166024|ENST00000298999|R3HCC1L	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.7107543945312	2	513.713482	1025.41241	-0.36307	-0.00018651	-3.3059	-0.0016983	-3.669	-0.0018848	513.7117372856758	35.228	0.53154	35.171	34.853	35.384	-0.056385					25	12	3	0	0	0	0.58668	1	2265	2265		47.657	8.8512	1	76448	+		66569	21244	44236	44255	75732	75732	262				-0.0992793635587077
YIDSCASPN	9	Carbamidomethyl (C)	_YIDSC(Carbamidomethyl (C))ASPN_					0	1	0			REV__ENSG00000166024|ENST00000298999|R3HCC1L	REV__ENSG00000166024|ENST00000298999|R3HCC1L	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	513.713482	1025.41241	-0.025911	-1.3311E-05	-3.5254	-0.001811	-3.5513	-0.0018244	513.711552203164	35.018	0.52916	35.006	34.807	35.336	-0.012203	-0.064986	-0.00039218	NaN	47.657	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66461	+		66570	21244	44236	44255			262				-0.0992793635587077
YIEKLRSLIFL	11	Unmodified	_YIEKLRSLIFL_					0	0	0			REV__ENST00000493413.1_1_1:185934944-185947193:+|nuORF	REV__ENST00000493413.1_1_1:185934944-185947193:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	465.6199951171875	3	465.618384	1393.83332	1.4064	0.00065485	1.5003	0.00069858	2.9067	0.0013534	465.61898595935673	27.113	0.56277	26.773	26.504	27.067	-0.34035					31	12	3	0	0	0	0.77205	1	1564	1564		17.167	0.63689	1	146260	+		66571	27692	44237	44256	75733	75733					0.1521592663066258
YIEKLRSLIFL	11	Unmodified	_YIEKLRSLIFL_					0	0	0			REV__ENST00000493413.1_1_1:185934944-185947193:+|nuORF	REV__ENST00000493413.1_1_1:185934944-185947193:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	465.618384	1393.83332	-0.70107	-0.00032643	3.7591	0.0017503	3.0581	0.0014239	465.6200741642913	27.203	0.48885	27.027	26.792	27.281	-0.17559	0.12701	0.0022237	NaN	17.167	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	157470	+		66572	27692	44237	44256							0.1521592663066258
YIEKLRSLIFL	11	Unmodified	_YIEKLRSLIFL_					0	0	0			REV__ENST00000493413.1_1_1:185934944-185947193:+|nuORF	REV__ENST00000493413.1_1_1:185934944-185947193:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	465.618384	1393.83332	1.4064	0.00065485	1.5003	0.00069858	2.9067	0.0013534	465.61898595935673	27.113	0.56277	26.773	26.504	27.067	-0.34035	-0.12701	-0.00093147	NaN	17.167	31	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146260	+		66573	27692	44237	44256							0.1521592663066258
YIEKSLLVP	9	Unmodified	_YIEKSLLVP_					0	0	0		ENSG00000162433|ENST00000327299|AK4	ENSG00000162433|ENST00000327299|AK4	ENSG00000162433|ENST00000327299|AK4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	531.3157958984375	2	531.3157	1060.61685	2.5638	0.0013622	4.2767	0.0022723	6.8404	0.0036344	531.3177191515188	95.1	2.5434	95.042	94.557	97.1	-0.057526					188	59	5	0	0	0	0.7932	1	10316	10316		24.203	4.206	1	4072600			66574	5689	44238	44257	75734	75734					0.08896370796969677
YIFGHLTIRS	10	Unmodified	_YIFGHLTIRS_					0	0	0			REV__ENST00000462685.1_1_2:74173872-74185284:+|nuORF	REV__ENST00000462685.1_1_2:74173872-74185284:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	402.89349365234375	3	402.892507	1205.65569	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.39	1	116.31	115.81	116.81	-0.074318								0	0	0	0.45132	1	12509	12509		22.58	6.5729	1		+		66575	18076	44239	44258	75735	75735					0.06109096151317317
YIFRHHLLVTV	11	Unmodified	_YIFRHHLLVTV_					0	0	0			REV__ENST00000471102.1_1_10:46281927-46282167:+|nuORF	REV__ENST00000471102.1_1_10:46281927-46282167:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	466.6081237792969	3	466.60659	1396.79794	0.32068	0.00014963	2.6768	0.001249	2.9975	0.0013986	466.60769889886956	100.37	2.2833	100.42	99.018	101.3	0.046356					147	53	4	0	0	0	0.76579	1	10777	10777		18.531	0.69791	1	458180	+		66576	27225	44240	44259	75736	75736					0.11541308893492896
YIFRHHLLVTV	11	Unmodified	_YIFRHHLLVTV_					0	0	0			REV__ENST00000471102.1_1_10:46281927-46282167:+|nuORF	REV__ENST00000471102.1_1_10:46281927-46282167:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	466.60784912109375	3	466.60659	1396.79794	-0.99183	-0.00046279	4.1431	0.0019332	3.1513	0.0014704	466.6084303998886	100.17	2.2081	100.39	99.16	101.37	0.21511					171	52	4	0	0	0	0.78683	1	10370	10370		14.086	0.57807	1	609920	+		66577	27225	44240	44259	75737	75737					0.11541308893492896
YIGLWRNYL	9	Unmodified	_YIGLWRNYL_					0	0	0		ENSG00000075539|ENST00000358350|FRYL	ENSG00000075539|ENST00000358350|FRYL	ENSG00000075539|ENST00000358350|FRYL	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	599.8228759765625	2	599.324391	1196.63423	-0.8281	-0.0004963	-2.4869	-0.0014904	-3.315	-0.0019867	599.3227264154351	59.698	0.73197	59.698	59.343	60.075	0					47	27	3	0	0	0	0.72402	1	5188	5188		38.806	1.647	1	124310			66578	1336	44241	44260	75738	75738					0.0437771112262908
YIIDPQNGL	9	Unmodified	_YIIDPQNGL_					0	0	0		ENSG00000163788|ENST00000296088|SNRK	ENSG00000163788|ENST00000296088|SNRK	ENSG00000163788|ENST00000296088|SNRK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	516.7717895507812	2	516.771657	1031.52876	-0.54226	-0.00028023	0.42611	0.0002202	-0.11615	-6.0023E-05	516.7717162731554	72.081	0.7501	72.467	72.084	72.834	0.38582					36	17	3	0	0	0	0.30689	1	8043	8043		64.207	3.2353	1	318610			66579	5863	44242	44261	75739	75739					0.014257502063401262
YIIDPQNGL	9	Unmodified	_YIIDPQNGL_					0	0	0		ENSG00000163788|ENST00000296088|SNRK	ENSG00000163788|ENST00000296088|SNRK	ENSG00000163788|ENST00000296088|SNRK	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	516.771657	1031.52876	-0.0157	-8.1135E-06	0.01556	8.0412E-06	-0.00013984	-7.2265E-08	516.7714425851187	71.949	0.74327	72.499	72.113	72.856	0.55009	0.016051	-0.00014762	NaN	64.207	37	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	414690			66580	5863	44242	44261							0.014257502063401262
YIILHPLIKKP	11	Unmodified	_YIILHPLIKKP_					0	0	0			REV__ENST00000272067.10_2_2:272273-275200:+|nuORF	REV__ENST00000272067.10_2_2:272273-275200:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	445.6358947753906	3	445.623469	1333.84858	0.051983	2.3165E-05	-2.1937	-0.00097755	-2.1417	-0.00095439	445.62225256384664	38.414	0.59107	38.386	38.129	38.72	-0.027843					29	13	3	0	0	0	0.17911	1	2605	2605		24.232	12.299	1	29525	+		66581	24538	44243	44262	75740	75740					0.19500838218482386
YIIQELRRPKY	11	Unmodified	_YIIQELRRPKY_					0	0	0		nc|ENSG00000136631|Q9NRW7-2|VPS45;ENSG00000136631|ENST00000644510|VPS45;ENST00000497638.2_1_1:150039914-150048408:+|nuORF;ENST00000460366.5_1_1:150039914-150049098:+|nuORF	nc|ENSG00000136631|Q9NRW7-2|VPS45	nc|ENSG00000136631|Q9NRW7-2|VPS45	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.9537658691406	3	493.620788	1477.84053	-0.71922	-0.00035502	1.484	0.00073253	0.76478	0.00037751	493.6213113585242	30.757	0.97104	30.82	30.436	31.408	0.063122					105	47	4	0	0	0	0.77511	1	1379	1379		16.53	1.751	1	228820			66582	4123	44244	44263	75741	75741					0.12072659231080252
YIKILVWYII	10	Unmodified	_YIKILVWYII_					0	0	0		ENST00000529118.1_1_16:70051886-70057359:-|nuORF	ENST00000529118.1_1_16:70051886-70057359:-|nuORF	ENST00000529118.1_1_16:70051886-70057359:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	441.9399108886719	3	441.940687	1322.80023	0.34626	0.00015303	-2.4362	-0.0010767	-2.09	-0.00092364	441.9394808074078	56.501	1.1083	56.601	56.467	57.576	0.099186					113	51	3	0	0	0	0.85285	1	4804	4804		16.717	0.79673	1	679940			66583	13318	44245	44264	75742	75742					0.1517434457859963
YIKIYIVLRRR	11	Unmodified	_YIKIYIVLRRR_					0	0	0		nc|ENSG00000149295|P14416-2|DRD2;ENSG00000149295|ENST00000362072|DRD2;nc|ENSG00000149295|P14416-3|DRD2;ENST00000540600.5_1_11:113285027-113346393:-|nuORF;ENST00000539420.1_1_11:113286028-113288807:-|nuORF	nc|ENSG00000149295|P14416-2|DRD2	nc|ENSG00000149295|P14416-2|DRD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	498.32440185546875	3	498.320672	1491.94019	-1.2571	-0.00062643	3.466	0.0017272	2.2089	0.0011007	498.32235621557885	49.598	1.5877	49.602	48.709	50.297	0.0035934					98	35	4	0	0	0	0.8498	1	4254	4254		6.001	2.382	1	206420			66584	5016	44246	44265	75743	75743					0.2138952163563772
YIKKRQGPGG	10	Unmodified	_YIKKRQGPGG_					0	0	0			REV__ENST00000381072.5_1_10:3176736-3177949:+|nuORF	REV__ENST00000381072.5_1_10:3176736-3177949:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	552.6597900390625	2	552.31964	1102.62473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.251	1	65.376	64.876	65.876	0.12532								0	0	0	0.45132	1	5794	5794		23.042	1.0826	1		+		66585	25958	44247	44266	75744	75744					0.07751942837080605
YIKTKKEKKRL	11	Unmodified	_YIKTKKEKKRL_					0	0	0		ENST00000535831.5_1_12:123319379-123341792:+|nuORF	ENST00000535831.5_1_12:123319379-123341792:+|nuORF	ENST00000535831.5_1_12:123319379-123341792:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	478.974609375	3	478.976683	1433.90822	-0.022494	-1.0774E-05	-4.3236	-0.0020709	-4.3461	-0.0020817	478.9744999510038	52.877	2.746	52.874	51.525	54.271	-0.0033035					162	72	3	0	0	0	0.80361	1	4681	4681		10.587	4.5858	1	150480			66586	13429	44248	44267	75745	75745					0.208621091618852
YIKTKKEKKRL	11	Unmodified	_YIKTKKEKKRL_					0	0	0		ENST00000535831.5_1_12:123319379-123341792:+|nuORF	ENST00000535831.5_1_12:123319379-123341792:+|nuORF	ENST00000535831.5_1_12:123319379-123341792:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30780029296875	3	478.976683	1433.90822	-0.25402	-0.00012167	-3.8919	-0.0018641	-4.1459	-0.0019858	478.9747709878051	47.62	1.4426	47.532	47.242	48.685	-0.087646					53	40	2	0	0	0	0.80813	1	3575	3575		9.6461	0.43434	1	370120			66587	13429	44248	44267	75746	75746					0.208621091618852
YILFKNVYAF	10	Unmodified	_YILFKNVYAF_					0	0	0		MERX_dup193|chr7:130520449-130521122:+|1.670141598206962|0.0678337748665423|4.62|61.0|27|3|sense;chr7:130503996-130520644|19|84.42|0.1|9.77|+|2|TE_info:MERX,MERX_dup193,TcMar-Tigger,DNA,acceptor,+,130520644,130521122|MEST,None|1	MERX_dup193|chr7:130520449-130521122:+|1.670141598206962|0.0678337748665423|4.62|61.0|27|3|sense	MERX_dup193|chr7:130520449-130521122:+|1.670141598206962|0.0678337748665423|4.62|61.0|27|3|sense	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	640.3471069335938	2	639.350074	1276.6856	0.01959	1.2525E-05	1.0265	0.0006563	1.0461	0.00066883	639.3493815590497	103.12	0.4239	103.12	102.91	103.34	0					13	10	2	0	0	0	0.37624	1	10549	10549		29.15	3.5755	1	655550			66588	493	44249	44268	75747	75747					0.05832035096659638
YILFTLLLIL	10	Unmodified	_YILFTLLLIL_					0	0	0			REV__ENSG00000134955|ENST00000403796|SLC37A2	REV__ENSG00000134955|ENST00000403796|SLC37A2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	407.93182373046875	3	407.933421	1220.77843	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.04	1	114.97	114.47	115.47	-0.072342								0	0	0	0.45132	1	12421	12421		4.6126	0.27374	1		+		66589	19178	44250	44269	75748	75748					0.17687539830058085
YILIHQALV	9	Unmodified	_YILIHQALV_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	535.3255004882812	2	535.32386	1068.63317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.65	1	111.77	111.27	112.27	0.11118								0	0	0	0.31828	1	12032	12032		24.203	5.8783	1				66590	1462	44251	44270	75749	75749					0.10159496753703934
YILILYRKSN	10	Unmodified	_YILILYRKSN_					0	0	0			REV__nc|ENSG00000104983|Q9Y6R9-2|CCDC61	REV__nc|ENSG00000104983|Q9Y6R9-2|CCDC61	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.8822631835938	2	641.87953	1281.74451	1.5974	0.0010254	2.9074	0.0018662	4.5048	0.0028915	641.8812497717933	97.472	4.451	97.703	96.652	101.1	0.23103					355	104	5	0	0	0	0.86589	1	10114	10114		29.15	3.5755	1	4266200	+		66591	17499	44252	44271	75750	75750					0.11490511390979918
YILKLRITRRF	11	Unmodified	_YILKLRITRRF_					0	0	0			REV__ENSG00000132170|ENST00000651735|PPARG	REV__ENSG00000132170|ENST00000651735|PPARG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.6495056152344	3	493.648789	1477.92454	-0.69215	-0.00034168	2.8519	0.0014078	2.1597	0.0010662	493.65006449160734	45.544	1.1393	45.556	45.28	46.419	0.012058					68	31	3	0	0	0	0.85873	1	3306	3306		5.4129	2.2016	1	171990	+		66592	18986	44253	44272	75751	75751					0.20469235118594042
YILPFSEVL	9	Unmodified	_YILPFSEVL_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2;ENST00000531161.5_1_11:44146432-44228372:+|nuORF	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	540.8004760742188	2	540.802426	1079.5903	-0.34187	-0.00018489	-3.0914	-0.0016719	-3.4333	-0.0018567	540.8005392456347	72.983	0.65971	73.537	73.191	73.851	0.55386					37	16	3	0	0	0	0.3636	1	8231	8231		60.294	7.3573	1	1189500			66593	5109	44254	44273	75752	75752					0.053686819056110835
YILVPIEKW	9	Unmodified	_YILVPIEKW_					0	0	0			REV__ENST00000465604.1_1_1:26229981-26231212:-|nuORF	REV__ENST00000465604.1_1_1:26229981-26231212:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	580.8400268554688	2	580.839342	1159.66413	0.64193	0.00037286	1.4523	0.00084353	2.0942	0.0012164	580.8399997377094	69.658	0.88029	69.793	69.47	70.351	0.13506					122	43	4	0	0	0	0.77546	1	6312	6312		31.955	2.7848	1	14396000	+		66594	27111	44255	44274	75753	75753					0.09068650067933959
YILYKSVF	8	Unmodified	_YILYKSVF_					0	0	0			REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|27|2|sense	REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|27|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	516.7935180664062	2	516.791861	1031.56917	0.6767	0.00034971	2.1183	0.0010947	2.795	0.0014444	516.7929283696592	86.202	2.6305	86.258	84.584	87.215	0.055641					143	60	4	0	0	0	0.86288	1	8763	8763		26.796	1.222	1	319120	+		66595	29479	44256	44275	75754	75754					0.05464716596770813
YILYKSVF	8	Unmodified	_YILYKSVF_					0	0	0			REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|27|2|sense	REV__L1MA3_dup8786|chr22:15809628-15810880:+|1.4941041180037395|0.1996308353673325|2.9|61.0|27|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	516.7938842773438	2	516.791861	1031.56917	0.70992	0.00036688	2.3714	0.0012255	3.0814	0.0015924	516.7930239817096	88.344	3.4046	88.495	87.469	90.874	0.15055					232	80	4	0	0	0	0.89494	1	8902	8902		37.159	4.3467	1	842420	+		66596	29479	44256	44275	75755	75755					0.05464716596770813
YIMILYIVAT	10	Unmodified	_YIMILYIVAT_					0	0	0			REV__ENST00000398849.6_1_17:28942955-28960136:+|nuORF	REV__ENST00000398849.6_1_17:28942955-28960136:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	600.3407592773438	2	600.340861	1198.66717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.029	1	28.098	27.598	28.598	0.06868								0	0	0	0.45132	1	1141	1141		31.955	3.8734	1		+		66597	26216	44257	44276	75756	75756					0.07578157130433283
YINNYFQILD	10	Unmodified	_YINNYFQILD_					0	0	0			REV__ENSG00000103479|ENST00000262133|RBL2	REV__ENSG00000103479|ENST00000262133|RBL2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	434.7801513671875	3	434.883677	1301.6292	-0.16759	-7.2881E-05	2.8466	0.0012379	2.679	0.0011651	435.21994263201685	67.005	1.3236	67.021	66.601	67.924	0.016205					103	59	2	0	0	0	0.37624	1	6336	6336		21.686	1.3707	1	236440	+		66598	17415	44258	44277	75757	75757					-0.009546375306626942
YIRFKHLFWWW	11	Unmodified	_YIRFKHLFWWW_					0	0	0			REV__nc|ENSG00000166262|Q96M60-2|FAM227B	REV__nc|ENSG00000166262|Q96M60-2|FAM227B	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3125610351562	3	561.297868	1680.87177	0.35107	0.00019706	4.2519	0.0023866	4.6029	0.0025836	561.300099660082	38.417	0.39862	38.359	38.074	38.473	-0.057915					15	11	2	0	0	0	0.18216	1	2274	2274		9.6461	8.1232	1	34973	+		66599	30003	44259	44278	75758	75758					0.05857277055815757
YIRRAKQKHL	10	Unmodified	_YIRRAKQKHL_					0	0	0			REV__nc|ENSG00000274391|P56180-4|TPTE	REV__nc|ENSG00000274391|P56180-4|TPTE	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	438.27294921875	3	438.270201	1311.78877	2.0595	0.00090261	4.1762	0.0018303	6.2357	0.0027329	438.2719380139852	107.11	1.2259	107.15	106.67	107.9	0.035614					128	28	5	0	0	0	0.85441	2	11714	11714;11810		26.063	2.549	1	4659700	+		66600	24002	44260	44279	75759;75760	75759					0.14534960327841873
YISIRHLR	8	Unmodified	_YISIRHLR_					0	0	0			REV__ENSG00000096070|ENST00000357641|BRPF3	REV__ENSG00000096070|ENST00000357641|BRPF3	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	529.7703247070312	2	529.3169	1056.61925	-0.12366	-6.5458E-05	1.9702	0.0010428	1.8465	0.00097739	529.8179254963367	67.218	0.13746	67.351	67.288	67.425	0.13326					5	4	2	0	0	0	0.4196	1	5987	5987		34.173	0	1	30347	+		66601	17073	44261	44280	75761	75761					0.09320264045254589
YIYLKILEAK	10	Unmodified	_YIYLKILEAK_					0	0	0			REV__ENST00000398148.7_3_19:6413682-6414126:-|nuORF	REV__ENST00000398148.7_3_19:6413682-6414126:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	627.384033203125	2	627.378832	1252.74311	0.9795	0.00061452	4.2538	0.0026687	5.2333	0.0032833	627.3814262419885	112.82	7.3419	112.85	112.69	120.03	0.028854					477	249	2	0	0	0	0.80179	1	12564	12564		39.253	2.8061	1	19815000	+		66602	26197	44262	44281	75762	75762					0.126848773022175
YKAASEGK	8	Unmodified	_YKAASEGK_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	427.2236022949219	2	427.224342	852.434132	2.0809	0.00088901	-1.2333	-0.0005269	0.84759	0.00036211	427.223756165633	107.04	0.86582	107.15	106.75	107.62	0.10396					62	30	3	0	0	0	0.84341	1	13054	13054		24.203	2.2429	1	677960			66603	6458	44263	44282	75763	75763					0.0020123645499552367
YKAPRRMELP	10	Unmodified	_YKAPRRMELP_					0	0	0		ENSG00000068615|ENST00000538924|REEP1	ENSG00000068615|ENST00000538924|REEP1	ENSG00000068615|ENST00000538924|REEP1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	630.8497314453125	2	630.847707	1259.68086	-0.029329	-1.8502E-05	3.3344	0.0021035	3.3051	0.002085	630.849677894081	111.25	1.2557	111.25	110.42	111.68	0					88	39	3	0	0	0	0.86218	1	11586	11586		32.812	5.7651	1	207570			66604	1201	44264	44283	75764	75764					0.06140827682247618
YKCEECGKSFS	11	Unmodified	_YKCEECGKSFS_					0	0	0		nc|ENSG00000160321|O43345-2|ZNF208;ENSG00000160321|ENST00000397126|ZNF208;ENSG00000213096|ENST00000357002|ZNF254;ENSG00000124459|ENST00000269973|ZNF45	nc|ENSG00000160321|O43345-2|ZNF208	nc|ENSG00000160321|O43345-2|ZNF208	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.76806640625	2	640.767931	1279.52131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.816	1	76.951	76.451	77.451	0.13478								0	0	0	0.56276	1	7202	7202		16.717	1.0756	1				66605	5580	44265	44284	75765	75765					-0.10727093447917468
YKCVGSQWEEK	11	Unmodified	_YKCVGSQWEEK_					0	0	0		nc|ENSG00000069122|Q8IZF2-3|ADGRF5;nc|ENSG00000069122|Q8IZF2-2|ADGRF5;ENSG00000069122|ENST00000283296|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	nc|ENSG00000069122|Q8IZF2-3|ADGRF5	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.8812255859375	3	452.879939	1355.61799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.083	1	18.453	17.953	18.953	-0.6296								0	0	0	0.56276	1	474	474		27.644	0	1				66606	1213	44266	44285	75766	75766					-0.04559782896444631
YKDIEAATGEF	11	Unmodified	_YKDIEAATGEF_					0	0	0		ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	622.29541015625	2	622.295693	1242.57683	0.7005	0.00043592	-0.61161	-0.0003806	0.088889	5.5315E-05	622.2952988976197	76.263	0.4218	76.396	76.138	76.56	0.13325					22	12	2	0	0	0	0.638	1	7130	7130		40.058	1.3046	1	121310			66607	4040	44267	44286	75767	75767					-0.03475220664290646
YKDIEAATGEF	11	Unmodified	_YKDIEAATGEF_					0	0	0		ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	622.295693	1242.57683	-0.46153	-0.00028721	-0.12866	-8.0064E-05	-0.59019	-0.00036727	622.2963547631026	76.539	0.40438	76.539	76.335	76.739	0	0.085198	-5.5679E-05	NaN	40.058	30	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78792			66608	4040	44267	44286							-0.03475220664290646
YKDIEAATGEF	11	Unmodified	_YKDIEAATGEF_					0	0	0		ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	622.295693	1242.57683	-0.28062	-0.00017463	0.64398	0.00040075	0.36336	0.00022612	622.2957415192509	76.436	0.32836	76.485	76.296	76.625	0.049194	0.031198	0.00090594	NaN	40.058	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40839			66609	4040	44267	44286							-0.03475220664290646
YKDIEAATGEF	11	Unmodified	_YKDIEAATGEF_					0	0	0		ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	622.295693	1242.57683	-0.10955	-6.8172E-05	0.78326	0.00048742	0.67371	0.00041925	622.2962222077456	76.289	0.45474	76.337	76.104	76.559	0.047974	-0.11703	0.0010793	NaN	40.058	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55337			66610	4040	44267	44286							-0.03475220664290646
YKDIEAATGEF	11	Unmodified	_YKDIEAATGEF_					0	0	0		ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	622.295693	1242.57683	1.2673	0.00078863	-1.1582	-0.00072073	0.10912	6.7907E-05	622.2948796538918	76.357	0.48867	76.482	76.152	76.641	0.12485	0.028147	-0.001337	NaN	40.058	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120410			66611	4040	44267	44286							-0.03475220664290646
YKDIEAATGEF	11	Unmodified	_YKDIEAATGEF_					0	0	0		ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	622.295693	1242.57683	-0.80462	-0.00050071	1.0156	0.00063203	0.21101	0.00013131	622.296192781915	76.321	0.40967	76.411	76.234	76.644	0.089363	-0.043211	0.0013685	NaN	40.058	29	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105130			66612	4040	44267	44286							-0.03475220664290646
YKDIEAATGEF	11	Unmodified	_YKDIEAATGEF_					0	0	0		ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	ENSG00000135632|ENST00000389501|SMYD5	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	622.295693	1242.57683	0.61283	0.00038136	-0.35847	-0.00022307	0.25436	0.00015829	622.2951328028931	75.959	0.25008	76.527	76.433	76.683	0.56836	0.073161	-0.0003417	NaN	40.058	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82013			66613	4040	44267	44286							-0.03475220664290646
YKFFWTARLAF	11	Unmodified	_YKFFWTARLAF_					0	0	0		ENSG00000143603|ENST00000271915|KCNN3;nc|ENSG00000143603|Q9UGI6-3|KCNN3;nc|ENSG00000143603|Q9UGI6-2|KCNN3	ENSG00000143603|ENST00000271915|KCNN3	ENSG00000143603|ENST00000271915|KCNN3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	483.92962646484375	3	483.92744	1448.76049	0.11537	5.583E-05	4.2868	0.0020745	4.4022	0.0021303	483.92948716936945	26.29	0.71645	26.395	26.013	26.73	0.1054					81	32	3	0	0	0	0.72892	1	987	987		26.75	0.68632	1	319080			66614	4650	44268	44287	75768	75768					0.054062176278875995
YKFQKKGL	8	Unmodified	_YKFQKKGL_					0	0	0			REV__ENSG00000166508|ENST00000303887|MCM7	REV__ENSG00000166508|ENST00000303887|MCM7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	506.3009033203125	2	506.302927	1010.5913	-0.41165	-0.00020842	-3.22	-0.0016303	-3.6317	-0.0018387	506.3013167893661	96.275	1.2816	96.506	95.928	97.21	0.23103					78	29	3	0	0	0	0.91005	1	9902	9902		42.474	7.2737	1	550160	+		66615	21300	44269	44288	75769	75769					0.0864294106518173
YKFQRKRRHKL	11	Unmodified	_YKFQRKRRHKL_					0	0	0		ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	520.6498413085938	3	520.651304	1558.93208	-0.60943	-0.0003173	-2.0196	-0.0010515	-2.629	-0.0013688	520.6501636940086	108.1	0.82125	108.1	107.92	108.74	0					55	39	2	0	0	0	0.8498	1	11247	11247		6.001	0	1	3218900			66616	8626	44270	44289	75770	75770					0.17497387438902479
YKFQRKRRHKL	11	Unmodified	_YKFQRKRRHKL_					0	0	0		ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	520.6497802734375	3	520.651304	1558.93208	-0.042795	-2.2281E-05	-4.0514	-0.0021094	-4.0942	-0.0021316	520.6491063805709	107.9	0.23258	107.86	107.69	107.93	-0.042412					27	5	6	0	0	0	0.7896	1	11764	11764		13.508	1.0751	1	125660000			66617	8626	44270	44289	75771	75771					0.17497387438902479
YKFQRKRRHKL	11	Unmodified	_YKFQRKRRHKL_					0	0	0		ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	520.6492919921875	3	520.651304	1558.93208	-0.19327	-0.00010063	-2.6994	-0.0014054	-2.8926	-0.0015061	520.6498187835778	108.9	1.3116	109.03	108.21	109.52	0.13026					69	41	2	0	0	0	0.84494	5	11636	11636;11649;11661;11673;11721		6.3209	3.2949	1	2987300			66618	8626	44270	44289	75772;75773;75774;75775;75776	75772					0.17497387438902479
YKFQRKRRHKL	11	Unmodified	_YKFQRKRRHKL_					0	0	0		ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	520.6502075195312	3	520.651304	1558.93208	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.88	1	108.96	108.46	109.46	0.078552								0	0	0	0.56276	1	11713	11713		18.531	7.9443	1				66619	8626	44270	44289	75777	75777					0.17497387438902479
YKFQRKRRHKL	11	Unmodified	_YKFQRKRRHKL_					0	0	0		ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	ENSG00000214376|ENST00000409977|VSTM5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	520.6503295898438	3	520.651304	1558.93208	-1.5477	-0.00080582	-1.41	-0.00073413	-2.9578	-0.00154	520.6504849996759	107.88	0.26408	107.92	107.71	107.97	0.036125					27	6	6	0	0	0	0.7896	1	11534	11534		13.508	1.0751	1	252890000			66620	8626	44270	44289	75778	75778					0.17497387438902479
YKGIIQMFLAL	11	Unmodified	_YKGIIQMFLAL_					0	0	0		L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|122|2|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|122|2|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|122|2|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	648.8713989257812	2	648.872859	1295.73117	2.3415	0.0015193	-3.6342	-0.0023581	-1.2926	-0.00083876	648.8704740715605	99.639	2.1468	99.585	98.646	100.79	-0.053734					125	49	3	0	0	0	0.72228	1	10818	10818		27.882	3.3631	1	323740			66621	14547	44271	44290	75779	75779					0.09512937287399836
YKGIIQMFLAL	11	Unmodified	_YKGIIQMFLAL_					0	0	0		L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|122|2|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|122|2|sense	L1MA4_dup7938|chr13:33896742-33901831:+|1.2463885520754638|0.125155516896529|3.32|63.0|122|2|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.87255859375	2	648.872859	1295.73117	-1.1412	-0.00074051	-0.94746	-0.00061478	-2.0887	-0.0013553	648.8725280227517	99.334	2.2334	99.52	98.635	100.87	0.18582					120	51	3	0	0	0	0.63176	1	10347	10347		40.778	5.6261	1	245270			66622	14547	44271	44290	75780	75780					0.09512937287399836
YKGYRRLIV	9	Unmodified	_YKGYRRLIV_					0	0	0			REV__nc|ENSG00000198039|Q14593-2|ZNF273	REV__nc|ENSG00000198039|Q14593-2|ZNF273	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	584.3563232421875	2	584.353483	1166.69241	0.73697	0.00043065	3.6235	0.0021174	4.3605	0.0025481	584.3556286390271	92.429	3.0487	92.654	91.107	94.155	0.22547					201	72	4	0	0	0	0.7932	1	9385	9385		18.324	0.95945	1	730880	+		66623	23289	44272	44291	75781	75781					0.11573392767877522
YKIIITKNN	9	Unmodified	_YKIIITKNN_					0	0	0			REV__ENSG00000231738|ENST00000532498|TSPAN19	REV__ENSG00000231738|ENST00000532498|TSPAN19	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8300170898438	2	553.832049	1105.64954	-0.64284	-0.00035603	-2.959	-0.0016388	-3.6018	-0.0019948	553.8302731906349	88.845	3.0917	88.845	86.951	90.043	0					213	71	4	0	0	0	0.76764	1	8516	8516		34.173	0.25091	1	1181400	+		66624	23763	44273	44292	75782	75782					0.10094577919812764
YKIIITKNN	9	Unmodified	_YKIIITKNN_					0	0	0			REV__ENSG00000231738|ENST00000532498|TSPAN19	REV__ENSG00000231738|ENST00000532498|TSPAN19	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.829833984375	2	553.832049	1105.64954	0.7451	0.00041266	-4.4233	-0.0024498	-3.6782	-0.0020371	553.82944867473	88.502	2.8689	88.652	86.785	89.654	0.15055					212	67	4	0	0	0	0.78983	1	8753	8753		27.882	1.1893	1	2008100	+		66625	23763	44273	44292	75783	75783					0.10094577919812764
YKIIITKNN	9	Unmodified	_YKIIITKNN_					0	0	0			REV__ENSG00000231738|ENST00000532498|TSPAN19	REV__ENSG00000231738|ENST00000532498|TSPAN19	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	553.8319702148438	2	553.832049	1105.64954	-1.3791	-0.00076379	-1.5532	-0.00086022	-2.9323	-0.001624	553.8310392753395	90.34	3.9855	90.81	89.476	93.462	0.47068					301	97	5	0	0	0	0.76255	2	10647	10637;10647		35.618	8.8222	1	5911200	+		66626	23763	44273	44292	75784;75785	75785					0.10094577919812764
YKKSSIARKTK	11	Unmodified	_YKKSSIARKTK_					0	0	0			REV__nc|ENSG00000080854|Q9UPX0|IGSF9B	REV__nc|ENSG00000080854|Q9UPX0|IGSF9B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.2677307128906	3	437.269866	1308.78777	-0.73822	-0.0003228	-3.8393	-0.0016788	-4.5775	-0.0020016	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.75121	1	4543	4543		21.78	2.8141	1	3639500	+		66627	16812	44274	44293	75786	75786					0.14572701168253843
YKKVSRKMRKI	11	Unmodified	_YKKVSRKMRKI_					0	0	0			REV__nc|ENSG00000143498|Q15573-2|TAF1A	REV__nc|ENSG00000143498|Q15573-2|TAF1A	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	480.3023681640625	3	479.634263	1435.88096	1.2446	0.00059696	-3.5274	-0.0016919	-2.2828	-0.0010949	479.6318335107323	19.602	1.526	19.132	18.609	20.135	-0.46967					74	32	3	0	0	0	0.81021	1	556	556		9.2118	0	1	106770	+		66628	19817	44275	44294	75787	75787					0.18045302349855774
YKLAALPV	8	Unmodified	_YKLAALPV_					0	0	0		ENSG00000136874|ENST00000259400|STX17	ENSG00000136874|ENST00000259400|STX17	ENSG00000136874|ENST00000259400|STX17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.7704162597656	2	437.773471	873.53239	-2.0028	-0.00087676	-4.2532	-0.0018619	-6.256	-0.0027387	437.7717477191302	40.214	2.554	40.591	39.609	42.163	0.3765					138	67	4	0	0	0	0.82464	1	3403	3403		21.702	0	1	10119000			66629	4148	44276	44295	75788	75788					0.09056464770833372
YKMEFKKAL	9	Unmodified	_YKMEFKKAL_					0	0	0			REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	REV__nc|ENSG00000157741|Q6ZU65-2|UBN2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	579.3225708007812	2	579.323002	1156.63145	-0.49661	-0.0002877	0.30793	0.00017839	-0.18867	-0.0001093	579.3230834038757	16.47	0.3677	15.983	15.821	16.189	-0.48718					14	7	3	0	0	0	0.69624	1	133	133		40.778	1.5253	1	512640	+		66630	20560	44277	44296	75789	75789					0.05940119673459776
YKNLIKARK	9	Unmodified	_YKNLIKARK_					0	0	0			REV__ENSG00000150760|ENST00000623213|DOCK1	REV__ENSG00000150760|ENST00000623213|DOCK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.36279296875	2	567.361308	1132.70806	-0.94241	-0.00053469	4.2694	0.0024223	3.327	0.0018876	567.3637060270148	42.168	1.9304	42.865	42.418	44.348	0.69754					144	47	5	0	0	0	0.7932	1	3769	3769		17.365	0	1	16501000	+		66631	20220	44278	44297	75790	75790					0.14701679284939928
YKPLSKPKKCV	11	Unmodified	_YKPLSKPKKCV_					0	0	0		ENSG00000155621|ENST00000334731|C9orf85;ENST00000377027.1_1_9:74533369-74587755:+|nuORF;nc|nan|Q96MD7|C9orf85	ENSG00000155621|ENST00000334731|C9orf85	ENSG00000155621|ENST00000334731|C9orf85	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	645.884521484375	2	645.883758	1289.75296	1.8764	0.0012119	-1.9975	-0.0012901	-0.1211	-7.8218E-05	645.8823845772775	105.75	1.6428	105.79	105.12	106.77	0.038322					94	38	3	0	0	0	0.7434	1	11547	11547		23.523	0	1	1452000			66632	5330	44279	44298	75791	75791					0.11967742035949414
YKPRIYTSPTW	11	Unmodified	_YKPRIYTSPTW_					0	0	0		ENST00000586720.5_1_17:76967660-76975958:-|nuORF;ENST00000587251.5_1_17:76967660-76972124:-|nuORF;ENSG00000108679|ENST00000262776|LGALS3BP	ENST00000586720.5_1_17:76967660-76975958:-|nuORF	ENST00000586720.5_1_17:76967660-76975958:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	471.2528991699219	3	471.250472	1410.72959	-0.70099	-0.00033034	0.30939	0.0001458	-0.3916	-0.00018454	471.25078380098626	31.32	0.62266	31.309	31.137	31.76	-0.010656					19	14	2	0	0	0	0.76892	1	1699	1699		17.833	0	1	39212			66633	2426	44280	44299	75792	75792					0.04065019523000046
YKRALLTKGFA	11	Unmodified	_YKRALLTKGFA_					0	0	0			REV__ENST00000534664.1_1_14:20824085-20824774:+|nuORF	REV__ENST00000534664.1_1_14:20824085-20824774:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	634.3746337890625	2	634.379697	1266.74484	-1.1774	-0.00074689	-2.9315	-0.0018597	-4.1089	-0.0026066	634.3776925529805	109.87	1.6182	109.87	109.32	110.94	0.0060425					148	63	3	0	0	0	0.72918	1	11688	11688		26.693	0.62953	1	2778200	+		66634	28372	44281	44300	75793	75793					0.12213931110841258
YKRGLRIRKRA	11	Unmodified	_YKRGLRIRKRA_					0	0	0			REV__ENSG00000172497|ENST00000307624|ACOT12	REV__ENSG00000172497|ENST00000307624|ACOT12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	472.970947265625	3	472.972266	1415.89497	0.3106	0.00014691	-3.0231	-0.0014298	-2.7125	-0.0012829	473.3050663884793	49.019	2.0636	49.057	48.411	50.474	0.037731					160	51	5	0	0	0	0.79476	1	3834	3834		12.433	3.6335	1	2073100	+		66635	21838	44282	44301	75794	75794					0.20365715893126435
YKRGLRIRKRA	11	Unmodified	_YKRGLRIRKRA_					0	0	0			REV__ENSG00000172497|ENST00000307624|ACOT12	REV__ENSG00000172497|ENST00000307624|ACOT12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	472.9706726074219	3	472.972266	1415.89497	-1.5017	-0.00071026	-1.4711	-0.00069578	-2.9728	-0.001406	472.97146844681254	45.906	1.1209	46.801	46.327	47.448	0.89542					102	27	5	0	0	0	0.74771	1	4353	4353		22.562	10.629	1	9488500	+		66636	21838	44282	44301	75795	75795					0.20365715893126435
YKRKRYQKYRR	11	Unmodified	_YKRKRYQKYRR_					0	0	0			REV__L1MEd_dup15041|chr11:43857788-43858329:-|1.793309270709539|0.3605782472414646|2.31|63.0|9|2|sense	REV__L1MEd_dup15041|chr11:43857788-43858329:-|1.793309270709539|0.3605782472414646|2.31|63.0|9|2|sense	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	548.3739624023438	3	548.990097	1643.94846	0.10926	5.9983E-05	-3.4842	-0.0019128	-3.375	-0.0018528	549.3214566045885	36.73	0.098145	36.753	36.692	36.791	0.023624					4	2	2	0	0	0	0.18343	1	2047	2047		8.7993	2.7983	1	31512	+		66637	29538	44283	44302	75796	75796					0.1522446860499258
YKRKRYQKYRR	11	Unmodified	_YKRKRYQKYRR_					0	0	0			REV__L1MEd_dup15041|chr11:43857788-43858329:-|1.793309270709539|0.3605782472414646|2.31|63.0|9|2|sense	REV__L1MEd_dup15041|chr11:43857788-43858329:-|1.793309270709539|0.3605782472414646|2.31|63.0|9|2|sense	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	548.990097	1643.94846	1.1577	0.00063559	3.6723	0.002016	4.83	0.0026516	548.9930098623681	36.657	0.20421	37.101	36.996	37.2	0.44415	0.17388	0.0063251	NaN	8.7993	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	88711	+		66638	29538	44283	44302							0.1522446860499258
YKRKTGVLLAF	11	Unmodified	_YKRKTGVLLAF_					0	0	0			REV__nc|ENSG00000155313|Q9UHP3|USP25	REV__nc|ENSG00000155313|Q9UHP3|USP25	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.39501953125	2	648.395348	1294.77614	-1.1411	-0.00073988	-3.4734	-0.0022521	-4.6144	-0.002992	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.76699	1	12521	12521		18.262	2.6203	1	2297700	+		66639	20423	44284	44303	75797	75797					0.14054504144951352
YKSRFWLLKLL	11	Unmodified	_YKSRFWLLKLL_					0	0	0		nc|ENSG00000143324|Q9UBH6-2|XPR1;ENSG00000143324|ENST00000367590|XPR1	nc|ENSG00000143324|Q9UBH6-2|XPR1	nc|ENSG00000143324|Q9UBH6-2|XPR1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	489.3210754394531	3	489.634257	1465.88094	-0.79959	-0.00039151	0.016351	8.006E-06	-0.78324	-0.0003835	489.6332258847184	16.362	0.08638	16.41	16.351	16.438	0.047804					6	3	2	0	0	0	0.18304	1	145	145		10.104	0	1	21051			66640	4619	44285	44304	75798	75798					0.16663625621504252
YKVQFKIRRQ	10	Unmodified	_YKVQFKIRRQ_					0	0	0		nc|ENSG00000185567|Q8IVF2-3|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2;ENST00000555122.1_1_14:105421221-105423995:-|nuORF	nc|ENSG00000185567|Q8IVF2-3|AHNAK2	nc|ENSG00000185567|Q8IVF2-3|AHNAK2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.9397277832031	3	455.941973	1364.80409	-0.018225	-8.3094E-06	-2.0697	-0.00094365	-2.0879	-0.00095196	455.940966623884	20.554	1.3955	19.925	19.49	20.885	-0.6296					70	33	4	0	0	0	0.85441	1	680	680		20.837	4.3073	1	132260			66641	7725	44286	44305	75799	75799					0.13627827125014846
YKVVKKKK	8	Unmodified	_YKVVKKKK_					0	0	0			REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	510.8511657714844	2	510.850045	1019.68554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.86	1	115.79	115.29	116.29	-0.073509								0	0	0	0.31173	1	12477	12477		4.3163	0.33103	1		+		66642	20406	44287	44306	75800	75800					0.1764807988731718
YKYLGMYALQ	10	Unmodified	_YKYLGMYALQ_					0	0	0			REV__ENSG00000164615|ENST00000297156|CAMLG	REV__ENSG00000164615|ENST00000297156|CAMLG	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	625.3202514648438	2	625.317917	1248.62128	0.59733	0.00037352	2.8381	0.0017747	3.4354	0.0021482	625.3195366547585	64.365	0.91222	64.489	64.125	65.038	0.12397					75	31	3	0	0	0	0.6116	1	5699	5699		49.442	2.9848	1	317080	+		66643	21096	44288	44307	75801	75801					0.006915119482073351
YKYRPRKKSK	10	Unmodified	_YKYRPRKKSK_					0	0	0		ENSG00000177732|ENST00000342665|SOX12	ENSG00000177732|ENST00000342665|SOX12	ENSG00000177732|ENST00000342665|SOX12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	451.94342041015625	3	451.941973	1352.80409	0.3266	0.00014761	2.2075	0.00099765	2.5341	0.0011453	451.9428113912826	53.505	3.0822	53.586	51.742	54.824	0.080456					237	89	4	0	0	0	0.81191	1	4377	4377		38.714	18.684	1	721610			66644	7163	44289	44308	75802	75802					0.1417982712500816
YKYRPRKKSK	10	Unmodified	_YKYRPRKKSK_					0	0	0		ENSG00000177732|ENST00000342665|SOX12	ENSG00000177732|ENST00000342665|SOX12	ENSG00000177732|ENST00000342665|SOX12	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.9432067871094	3	451.941973	1352.80409	-0.53385	-0.00024127	3.0718	0.0013883	2.538	0.001147	451.94322778238944	53.429	2.5301	53.367	51.606	54.136	-0.062061					200	73	4	0	0	0	0.8492	1	4389	4389		18.531	2.0012	1	920720			66645	7163	44289	44308	75803	75803					0.1417982712500816
YKYRPRKKSK	10	Unmodified	_YKYRPRKKSK_					0	0	0		ENSG00000177732|ENST00000342665|SOX12	ENSG00000177732|ENST00000342665|SOX12	ENSG00000177732|ENST00000342665|SOX12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.9428405761719	3	451.941973	1352.80409	0.93902	0.00042438	1.7195	0.0007771	2.6585	0.0012015	451.94264736171164	50.689	2.054	51.44	50.261	52.315	0.75174					139	49	4	0	0	0	0.8492	1	5013	5013		18.531	1.3643	1	756920			66646	7163	44289	44308	75804	75804					0.1417982712500816
YLAKVRAVKEA	11	Unmodified	_YLAKVRAVKEA_					0	0	0			REV__nc|ENSG00000160752|P14324-2|FDPS	REV__nc|ENSG00000160752|P14324-2|FDPS	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	624.3739624023438	2	624.377155	1246.73976	3.9982	0.0024964	2.4796	0.0015482	6.4778	0.0040446	624.3785127327301	103.46	0.64096	103.72	103.33	103.97	0.26524					30	14	3	0	0	0	0.17347	1	12645	12645		22.58	5.1116	1	1453100	+		66647	20736	44290	44309	75805	75805					0.12625627248235105
YLALQCSH	8	Unmodified	_YLALQCSH_					0	0	0		nc|ENSG00000168671|Q3SY77-2|UGT3A2;ENSG00000168671|ENST00000282507|UGT3A2	nc|ENSG00000168671|Q3SY77-2|UGT3A2	nc|ENSG00000168671|Q3SY77-2|UGT3A2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.2344970703125	2	467.726195	933.437837	-1.0005	-0.00046794	0.37741	0.00017653	-0.62304	-0.00029141	467.7257698185973	67.71	0.40961	67.769	67.569	67.979	0.059288					19	15	2	0	0	0	0.4196	1	6066	6066		39.021	10.767	1	60517			66648	6422	44291	44310	75806	75806					-0.03154417042799196
YLAVALAL	8	Unmodified	_YLAVALAL_					0	0	0			REV__ENST00000489120.5_1_2:27346693-27351996:+|nuORF	REV__ENST00000489120.5_1_2:27346693-27351996:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	417.2587585449219	2	417.260197	832.50584	0.01446	6.0334E-06	-4.2324	-0.001766	-4.218	-0.00176	417.25827374912234	20.789	1.8301	20.865	20.521	22.351	0.07585					175	91	3	0	0	0	0.84567	1	572	572		24.504	2.8017	1	817900	+		66649	19862	44292	44311	75807	75807					0.08288775879498189
YLCFIVLVKVK	11	Unmodified	_YLCFIVLVKVK_					0	0	0		nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1;ENST00000493491.5_1_3:4841632-4887906:+|nuORF	nc|ENSG00000150995|Q14643-4|ITPR1	nc|ENSG00000150995|Q14643-4|ITPR1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	441.9401550292969	3	442.27356	1323.79885	-0.3913	-0.00017306	1.784	0.00078901	1.3927	0.00061595	442.2743452901443	56.183	0.42176	56.156	55.774	56.196	-0.027279					23	13	2	0	0	0	0.17729	1	5133	5133		17.833	0.11161	1	422600			66650	5087	44293	44312	75808	75808					0.14990387218176693
YLCPRVKKN	9	Unmodified	_YLCPRVKKN_					0	0	0			REV__AluJr_dup22765|chr5:77705545-77705824:+|1.4549525491326545|0.0077154739460939|7.56|63.0|1|1|sense	REV__AluJr_dup22765|chr5:77705545-77705824:+|1.4549525491326545|0.0077154739460939|7.56|63.0|1|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.8197631835938	2	560.818418	1119.62228	1.394	0.00078178	1.0555	0.00059192	2.4495	0.0013737	560.8189408405052	92.38	3.0704	92.425	91.102	94.172	0.045456					218	72	4	0	0	0	0.7932	1	9591	9591		24.203	1.1603	1	723720	+		66651	15383	44294	44313	75809	75809					0.06725771107767287
YLCQYRCI	8	Unmodified	_YLCQYRCI_					0	0	0		ENSG00000172638|ENST00000307998|EFEMP2	ENSG00000172638|ENST00000307998|EFEMP2	ENSG00000172638|ENST00000307998|EFEMP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	531.8025512695312	2	531.24898	1060.48341	-0.23541	-0.00012506	-1.3769	-0.00073145	-1.6123	-0.00085651	531.2481283923704	53.214	0.3724	53.829	53.614	53.986	0.61436					13	8	2	0	0	0	0.4196	1	5386	5386		37.028	0	1	118420			66652	6780	44295	44314	75810	75810					-0.04441514852055661
YLDHNSFDY	9	Unmodified	_YLDHNSFDY_					0	0	0		ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	587.2463989257812	2	587.246003	1172.47745	-0.97317	-0.00057149	1.158	0.00068001	0.18479	0.00010852	587.24660096398	54.067	1.142	54.067	53.727	54.869	0					83	37	4	0	0	0	0.0015479	7	4529	4498;4510;4520;4529;4541;4551;4560		143.89	80.58	1	1493000			66653	6908	44296	44315	75811;75812;75813;75814;75815;75816;75817	75814					-0.10188618558368034
YLDHNSFDY	9	Unmodified	_YLDHNSFDY_					0	0	0		ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	587.24609375	2	587.246003	1172.47745	-0.66577	-0.00039097	0.76073	0.00044674	0.094963	5.5766E-05	587.2463764735331	54.108	2.7006	54.103	53.244	55.944	-0.0053711					193	79	5	0	0	0	2.4207E-08	13	4754	4735;4745;4754;4764;4772;4779;4785;4793;4801;4810;4817;4825;4861		158.07	84.1	1	4697700			66654	6908	44296	44315	75818;75819;75820;75821;75822;75823;75824;75825;75826;75827;75828;75829;75830	75820					-0.10188618558368034
YLDHNSFDY	9	Unmodified	_YLDHNSFDY_					0	0	0		ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	587.2461547851562	2	587.246003	1172.47745	-0.094742	-5.5637E-05	-0.017806	-1.0457E-05	-0.11255	-6.6094E-05	587.2459295783484	54.068	2.6108	54.044	53.473	56.084	-0.024754					153	71	5	0	0	0	2.3277E-51	15	4838	4826;4838;4850;4861;4872;4882;4891;4903;4911;4922;4931;4941;4957;4965;4968		209.84	109.39	1	4926100			66655	6908	44296	44315	75831;75832;75833;75834;75835;75836;75837;75838;75839;75840;75841;75842;75843;75844;75845	75832					-0.10188618558368034
YLDHNSFDY	9	Unmodified	_YLDHNSFDY_					0	0	0		ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	587.2462158203125	2	587.246003	1172.47745	-1.47	-0.00086323	1.4931	0.00087681	0.023124	1.3579E-05	587.2467821876162	54.103	2.483	54.126	53.539	56.022	0.022537					156	69	5	0	0	0	9.502000000000001E-29	13	4799	4768;4780;4790;4799;4809;4818;4828;4837;4845;4852;4862;4891;4900		185.55	103.24	1	5510700			66656	6908	44296	44315	75846;75847;75848;75849;75850;75851;75852;75853;75854;75855;75856;75857;75858	75849					-0.10188618558368034
YLDHNSFDY	9	Unmodified	_YLDHNSFDY_					0	0	0		ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	587.246003	1172.47745	0.46686	0.00027416	0.30632	0.00017988	0.77318	0.00045404	587.245594619639	54.051	0.39471	54.133	54.003	54.398	0.081524	0.038412	-0.00060936	NaN	209.84	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104270			66657	6908	44296	44315							-0.10188618558368034
YLDRLIPQD	9	Unmodified	_YLDRLIPQD_					0	0	0		ENST00000467509.5_1_1:58881067-58996314:-|nuORF	ENST00000467509.5_1_1:58881067-58996314:-|nuORF	ENST00000467509.5_1_1:58881067-58996314:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3087768554688	2	566.803488	1131.59242	0.86268	0.00048897	2.5987	0.001473	3.4614	0.0019619	566.804831631569	62.733	2.0024	63.288	62.559	64.561	0.55449					102	46	4	0	0	0	0.77696	1	6785	6785		31.53	1.0262	1	716580			66658	12156	44297	44316	75859	75859					0.031891106434159155
YLDRLSSAG	9	Unmodified	_YLDRLSSAG_					0	0	0			REV__ENSG00000185915|ENST00000379499|KLHL34	REV__ENSG00000185915|ENST00000379499|KLHL34	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	491.2575378417969	2	491.253631	980.49271	0.43454	0.00021347	2.8669	0.0014084	3.3014	0.0016218	491.25488900743704	61.005	0.76385	61.124	60.433	61.197	0.11901					62	32	3	0	0	0	0.78983	1	5265	5265		27.882	2.4321	1	325120	+		66659	22804	44298	44317	75860	75860					0.0016829302946916869
YLEDSPLEL	9	Unmodified	_YLEDSPLEL_					0	0	0		ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.769287109375	2	539.76878	1077.52301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.896	1	78.302	77.802	78.802	0.40531								0	0	0	0.40804	1	8878	8878		55.504	0	1				66660	3770	44299	44318	75861	75861					-0.012653930960141224
YLENVRMA	8	Unmodified	_YLENVRMA_					0	0	0			REV__nc|ENSG00000113719|Q969X5-3|ERGIC1	REV__nc|ENSG00000113719|Q969X5-3|ERGIC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.25006103515625	2	498.252577	994.490601	-0.99209	-0.00049431	-3.1151	-0.0015521	-4.1072	-0.0020464	498.25142789231467	84.759	2.4523	84.759	83.586	86.038	0					132	57	3	0	0	0	0.88915	1	7976	7976		35.201	6.0512	1	112180	+		66661	29789	44300	44319	75862	75862					-0.006864589799761234
YLEPRLKGT	9	Unmodified	_YLEPRLKGT_					0	0	0		L1M2_dup9102|chr21:15781465-15783675:+|2.176233979814302|0.1805436335784144|3.59|63.0|5|1|sense	L1M2_dup9102|chr21:15781465-15783675:+|2.176233979814302|0.1805436335784144|3.59|63.0|5|1|sense	L1M2_dup9102|chr21:15781465-15783675:+|2.176233979814302|0.1805436335784144|3.59|63.0|5|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.3079833984375	2	538.808574	1075.60259	0.74987	0.00040403	-4.2313	-0.0022799	-3.4814	-0.0018758	538.8062473439284	90.482	4.2554	90.636	89.398	93.654	0.15388					231	101	4	0	0	0	0.7932	1	9178	9178		26.693	2.1737	1	840570			66662	14516	44301	44320	75863	75863					0.06781718368665679
YLERVRRK	8	Unmodified	_YLERVRRK_					0	0	0			REV__ENSG00000184983|ENST00000498737|NDUFA6	REV__ENSG00000184983|ENST00000498737|NDUFA6	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	560.340576171875	2	560.340907	1118.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.82	1	104.01	103.51	104.51	0.18887								0	0	0	0.29452	1	12627	12627		33.516	1.9858	1		+		66663	22718	44302	44321	75864	75864					0.11267337965318802
YLEVPGRLN	9	Unmodified	_YLEVPGRLN_					0	0	0		ENSG00000174469|ENST00000361727|CNTNAP2	ENSG00000174469|ENST00000361727|CNTNAP2	ENSG00000174469|ENST00000361727|CNTNAP2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.2697143554688	2	530.792924	1059.57129	-0.28616	-0.00015189	4.0635	0.0021569	3.7774	0.002005	531.2960241247408	46.413	0.16312	46.885	46.775	46.938	0.4714					5	3	2	0	0	0	0.20789	1	4369	4369		35.618	7.736	1	165690			66664	6936	44303	44322	75865	75865					0.043891453345850096
YLFFPCTR	8	Unmodified	_YLFFPCTR_					0	0	0			REV__ENST00000243563.7_1_19:41256925-41257042:+|nuORF	REV__ENST00000243563.7_1_19:41256925-41257042:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.7601318359375	2	523.760038	1045.50552	-0.042751	-2.2391E-05	1.9559	0.0010244	1.9132	0.001002	523.7607727774529	60.587	0.95979	60.575	60.077	61.037	-0.012203					59	22	4	0	0	0	0.93529	1	5608	5608		52.299	0	1	308610	+		66665	24237	44304	44323	75866	75866					-0.015409671119869017
YLFLLRRA	8	Unmodified	_YLFLLRRA_					0	0	0		ENST00000449985.6_1_17:8076858-8076936:-|nuORF	ENST00000449985.6_1_17:8076858-8076936:-|nuORF	ENST00000449985.6_1_17:8076858-8076936:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	526.3234252929688	2	526.324194	1050.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.379	1	54.33	53.83	54.83	-0.049271								0	0	0	0.29498	1	4498	4498		26.796	1.3459	1				66666	11886	44305	44324	75867	75867					0.110543361934333
YLGGFLLVL	9	Unmodified	_YLGGFLLVL_					0	0	0		ENSG00000081052|ENST00000396625|COL4A4	ENSG00000081052|ENST00000396625|COL4A4	ENSG00000081052|ENST00000396625|COL4A4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.80078125	2	497.802229	993.589904	-0.64969	-0.00032342	-3.5738	-0.001779	-4.2235	-0.0021024	497.8003068501005	69.219	0.68383	69.182	68.854	69.538	-0.036964					74	32	3	0	0	0	0.72098	1	6707	6707		39.021	0	1	424530			66667	1459	44306	44325	75868	75868					0.09285306976426
YLGLVPLLLQH	11	Unmodified	_YLGLVPLLLQH_					0	0	0			REV__chr14:75959345-75963316|16|15.12|0.63|4.59|-|0|TGFB3,TGFB3|1	REV__chr14:75959345-75963316|16|15.12|0.63|4.59|-|0|TGFB3,TGFB3|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.5923156738281	3	422.592058	1264.75434	-0.25442	-0.00010752	1.599	0.00067572	1.3446	0.0005682	422.59266079937345	57.115	1.709	57.086	56.583	58.292	-0.02866					127	51	4	0	0	0	0.75906	1	5330	5330		20.03	0.7678	1	391180	+		66668	15606	44307	44326	75869	75869					0.13255699396381715
YLGVVQCGRKE	11	Unmodified	_YLGVVQCGRKE_					0	0	0			REV__ENSG00000097096|ENST00000341460|SYDE2	REV__ENSG00000097096|ENST00000341460|SYDE2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	626.3251953125	2	626.329347	1250.64414	-0.15906	-9.9625E-05	-2.5062	-0.0015697	-2.6652	-0.0016693	626.3277543404057	53.246	0.94266	53.242	52.744	53.687	-0.0033035					65	25	3	0	0	0	0.71207	1	4624	4624		19.997	7.1851	1	196380	+		66669	17082	44308	44327	75870	75870					0.028845310656834044
YLHALRIP	8	Unmodified	_YLHALRIP_					0	0	0		nc|ENSG00000198925|Q7Z3C6-3|ATG9A;nc|ENSG00000198925|Q7Z3C6-2|ATG9A;ENSG00000198925|ENST00000361242|ATG9A	nc|ENSG00000198925|Q7Z3C6-3|ATG9A	nc|ENSG00000198925|Q7Z3C6-3|ATG9A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	492.2972412109375	2	491.795269	981.575986	-1.1119	-0.00054683	2.4388	0.0011994	1.3269	0.00065256	491.79642278746286	73.027	0.75407	73.11	72.701	73.455	0.083138					42	26	2	0	0	0	0.86288	1	6685	6685		26.796	7.4361	1	82376			66670	8371	44309	44328	75871	75871					0.08446074267976655
YLHLKSSIQF	10	Unmodified	_YLHLKSSIQF_					0	0	0			REV__nc|ENSG00000081985|Q99665-2|IL12RB2	REV__nc|ENSG00000081985|Q99665-2|IL12RB2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	618.3456420898438	2	618.342781	1234.67101	1.2492	0.00077242	3.7041	0.0022904	4.9533	0.0030628	618.344978551102	97.744	3.3917	97.971	96.779	100.17	0.22787					230	79	4	0	0	0	0.86218	1	10127	10127		32.812	2.4947	1	960930	+		66671	16829	44310	44329	75872	75872					0.06305962948522392
YLHPQTPL	8	Unmodified	_YLHPQTPL_					0	0	0			REV__nc|ENSG00000064393|Q9H2X6-3|HIPK2	REV__nc|ENSG00000064393|Q9H2X6-3|HIPK2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	485.2860412597656	2	484.763635	967.512717	0.68705	0.00033306	-1.4916	-0.00072307	-0.80453	-0.00039001	484.7626997719748	50.957	0.78109	51.709	51.366	52.147	0.75174					22	18	2	0	0	0	0.4196	1	5086	5086		18.324	0	1	247680	+		66672	16476	44311	44330	75873	75873					0.027660887600859496
YLHYIRKYNRF	11	Unmodified	_YLHYIRKYNRF_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	524.3250122070312	3	524.952649	1571.83612	0.20621	0.00010825	3.6233	0.0019021	3.8295	0.0020103	524.9544590993228	32.037	0.64169	32.164	31.818	32.459	0.12643					41	14	4	0	0	0	0.181	1	2181	2181		13.508	3.404	1	336340			66673	4568	44312	44331	75874	75874					0.07307194808163331
YLHYIRKYNRF	11	Unmodified	_YLHYIRKYNRF_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	524.952649	1571.83612	0.69548	0.00036509	3.4108	0.0017905	4.1063	0.0021556	524.9544013736639	31.845	0.81366	31.952	31.675	32.488	0.10707	-0.10579	-0.00013368	NaN	13.508	48	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	319050			66674	4568	44312	44331							0.07307194808163331
YLIAHLPR	8	Unmodified	_YLIAHLPR_					0	0	0		ENST00000472011.5_1_1:235582749-235612074:+|nuORF;nc|ENSG00000285053|Q15813|TBCE;nc|ENSG00000285053|Q15813-2|TBCE	ENST00000472011.5_1_1:235582749-235612074:+|nuORF	ENST00000472011.5_1_1:235582749-235612074:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.79559326171875	2	491.795269	981.575986	-1.2395	-0.00060959	1.4172	0.00069695	0.17764	8.7362E-05	491.7958275421146	44.647	1.7443	45.492	44.612	46.357	0.84437					115	42	4	0	0	0	0.82464	1	4172	4172		21.702	0	1	6753400			66675	12252	44313	44332	75875	75875					0.08446074267988024
YLIAHLPR	8	Unmodified	_YLIAHLPR_					0	0	0		ENST00000472011.5_1_1:235582749-235612074:+|nuORF;nc|ENSG00000285053|Q15813|TBCE;nc|ENSG00000285053|Q15813-2|TBCE	ENST00000472011.5_1_1:235582749-235612074:+|nuORF	ENST00000472011.5_1_1:235582749-235612074:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	491.7959289550781	2	491.795269	981.575986	-0.85536	-0.00042066	1.576	0.00077505	0.72059	0.00035438	491.79594594464555	45.253	0.48487	46.149	45.883	46.368	0.89542					30	11	3	0	0	0	0.87276	1	4184	4184		29.842	0	1	6858700			66676	12252	44313	44332	75876	75876					0.08446074267988024
YLIKDIRF	8	Unmodified	_YLIKDIRF_					0	0	0		ENST00000466614.1_1_22:30983271-30987820:-|nuORF;nc|ENSG00000100029|O00541-2|PES1;ENSG00000100029|ENST00000354694|PES1	ENST00000466614.1_1_22:30983271-30987820:-|nuORF	ENST00000466614.1_1_22:30983271-30987820:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	534.315185546875	2	534.316035	1066.61752	-0.36756	-0.00019639	-1.2952	-0.00069206	-1.6628	-0.00088845	534.3153457506329	43.912	0.41157	43.878	43.58	43.991	-0.03347					16	9	2	0	0	0	0.9159	1	3456	3456		44.531	2.0566	1	114250			66677	1786	44314	44333	75877	75877					0.08687210236666942
YLIVVIVMV	9	Unmodified	_YLIVVIVMV_					0	0	0			REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	REV__nc|ENSG00000122778|Q9HCM3-2|KIAA1549	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	524.8272094726562	2	524.827389	1047.64023	-0.63596	-0.00033377	-0.14994	-7.8693E-05	-0.7859	-0.00041246	524.827204081804	99.538	3.356	99.538	98.89	102.25	0					252	80	4	0	0	0	0.7932	1	10388	10388		21.702	4.3374	1	15330000	+		66678	18513	44315	44334	75878	75878					0.11831093309911012
YLKAAKKG	8	Unmodified	_YLKAAKKG_					0	0	0		nc|ENSG00000164323|Q9P2B7-2|CFAP97;ENSG00000164323|ENST00000458385|CFAP97	nc|ENSG00000164323|Q9P2B7-2|CFAP97	nc|ENSG00000164323|Q9P2B7-2|CFAP97	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	439.773681640625	2	439.776545	877.538538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.397	1	62.413	61.913	62.913	0.015724								0	0	0	0.30252	1	5441	5441		19.36	0	1				66679	5955	44316	44335	75879	75879					0.09486983002375382
YLKAKQYMEE	10	Unmodified	_YLKAKQYMEE_					0	0	0		ENSG00000154174|ENST00000284320|TOMM70;ENST00000492171.1_1_3:100096542-100100595:-|nuORF	ENSG00000154174|ENST00000284320|TOMM70	ENSG00000154174|ENST00000284320|TOMM70	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	435.36041259765625	3	434.884801	1301.63257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.56	1	117.65	117.15	118.15	0.087753								0	0	0	0.45132	1	12440	12440		19.263	0	1				66680	5259	44317	44336	75880	75880					-0.006177107483154032
YLKARLKTMA	10	Unmodified	_YLKARLKTMA_					0	0	0			REV__ENSG00000112031|ENST00000367233|MTRF1L	REV__ENSG00000112031|ENST00000367233|MTRF1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.855712890625	2	597.855001	1193.69545	0.93582	0.00055948	1.0876	0.00065025	2.0235	0.0012097	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.86218	1	9427	9427		32.812	3.6424	1	2638300	+		66681	17910	44318	44337	75881	75881					0.10634899830392897
YLKDPKPPE	9	Unmodified	_YLKDPKPPE_					0	0	0			REV__ENSG00000176532|ENST00000319694|PRR15	REV__ENSG00000176532|ENST00000319694|PRR15	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	543.7957153320312	2	543.795132	1085.57571	-1.3241	-0.00072002	2.5001	0.0013595	1.176	0.00063952	543.7963351604897	28.74	0.75562	28.711	28.328	29.084	-0.029207					36	15	3	0	0	0	0.31972	1	1754	1754		63.306	2.3343	1	392250	+		66682	22132	44319	44338	75882	75882					0.03634609757477847
YLKGICSGG	9	Unmodified	_YLKGICSGG_					0	0	0		ENSG00000173530|ENST00000312584|TNFRSF10D;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B	ENSG00000173530|ENST00000312584|TNFRSF10D	ENSG00000173530|ENST00000312584|TNFRSF10D	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	449.23187255859375	2	449.228571	896.442588	0.61452	0.00027606	3.8652	0.0017363	4.4797	0.0020124	449.2302672922752	83.471	4.8977	83.402	80.905	85.803	-0.069313					227	113	3	0	0	0	0.74721	1	8475	8475		37.159	10.363	1	260170			66683	3155	44320	44339	75883	75883					-0.009775329000149213
YLKLLKIGKL	10	Unmodified	_YLKLLKIGKL_					0	0	0			REV__nc|ENSG00000069431|O60706|ABCC9	REV__nc|ENSG00000069431|O60706|ABCC9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	594.90576171875	2	594.907559	1187.80057	-0.57964	-0.00034483	-2.4659	-0.001467	-3.0455	-0.0018118	594.9058359149159	108.88	0.56851	108.92	108.65	109.22	0.034363					61	27	3	0	0	0	0.84112	3	11955	11955;11967;11975		37.159	26.294	1	1743300	+		66684	16582	44321	44340	75884;75885;75886	75884					0.21417764298462316
YLKRHEQI	8	Unmodified	_YLKRHEQI_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	543.8060302734375	2	543.806365	1085.59818	0.22212	0.00012079	-0.037578	-2.0435E-05	0.18454	0.00010035	543.8060783464553	54.313	0.51321	54.287	54.022	54.535	-0.025955					29	14	3	0	0	0	0.884	1	4896	4896		33.516	0.70317	1	146680			66685	2036	44322	44341	75887	75887					0.05880253945747427
YLKRKYLLSSI	11	Unmodified	_YLKRKYLLSSI_					0	0	0		ENST00000464178.1_1_1:38148797-38151999:-|nuORF;ENSG00000116922|ENST00000486637|C1orf109	ENST00000464178.1_1_1:38148797-38151999:-|nuORF	ENST00000464178.1_1_1:38148797-38151999:-|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	461.9483947753906	3	461.950134	1382.82857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.12	1	112.1	111.6	112.6	-0.025414								0	0	0	0.56276	1	12383	12383		13.508	1.3013	1				66686	2956	44323	44342	75888	75888					0.15247042487908402
YLKTCKAQA	9	Carbamidomethyl (C)	_YLKTC(Carbamidomethyl (C))KAQA_	YLKTC(1)KAQA		YLKTC(49)KAQA		0	1	0		nc|ENSG00000198945|Q96JM7-2|L3MBTL3;ENSG00000198945|ENST00000361794|L3MBTL3	nc|ENSG00000198945|Q96JM7-2|L3MBTL3	nc|ENSG00000198945|Q96JM7-2|L3MBTL3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	541.7828979492188	2	541.786784	1081.55902	0.62478	0.0003385	-3.4349	-0.001861	-2.8101	-0.0015225	541.784787554362	56.884	2.4378	56.855	56.549	58.986	-0.02866					173	76	4	0	0	0	0.55097	1	5383	5383		49.442	10.189	1	5802700			66687	8377	44324	44343	75889	75889	101				0.021497855998632076
YLLALTAS	8	Unmodified	_YLLALTAS_					0	0	0		ENSG00000257008|ENST00000582579|GPR142;nc|ENSG00000257008|Q7Z601|GPR142	ENSG00000257008|ENST00000582579|GPR142	ENSG00000257008|ENST00000582579|GPR142	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	426.2457275390625	2	426.247286	850.48002	1.0559	0.00045007	-3.9444	-0.0016813	-2.8885	-0.0012312	426.2455229557475	87.647	3.9379	87.573	85.625	89.563	-0.074005					153	92	2	0	0	0	0.86791	2	9139	9139;9152		28.254	1.4582	1	4306400			66688	8903	44325	44344	75890;75891	75890					0.048798816372254805
YLLALTAS	8	Unmodified	_YLLALTAS_					0	0	0		ENSG00000257008|ENST00000582579|GPR142;nc|ENSG00000257008|Q7Z601|GPR142	ENSG00000257008|ENST00000582579|GPR142	ENSG00000257008|ENST00000582579|GPR142	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	426.2448425292969	2	426.247286	850.48002	-1.7038	-0.00072625	-1.2223	-0.00052102	-2.9262	-0.0012473	426.246697883185	87.448	3.9173	87.649	85.72	89.637	0.20114					165	92	2	0	0	0	0.86288	1	8720	8720		26.796	0	1	4015800			66689	8903	44325	44344	75892	75892					0.048798816372254805
YLLALTAS	8	Unmodified	_YLLALTAS_					0	0	0		ENSG00000257008|ENST00000582579|GPR142;nc|ENSG00000257008|Q7Z601|GPR142	ENSG00000257008|ENST00000582579|GPR142	ENSG00000257008|ENST00000582579|GPR142	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	426.2450866699219	2	426.247286	850.48002	-1.843	-0.00078557	-1.0037	-0.00042784	-2.8467	-0.0012134	426.2467741737408	87.495	4.0009	87.665	85.686	89.687	0.16922					180	93	4	0	0	0	0.86288	1	8671	8671		26.796	1.3459	1	3180100			66690	8903	44325	44344	75893	75893					0.048798816372254805
YLLALTAS	8	Unmodified	_YLLALTAS_					0	0	0		ENSG00000257008|ENST00000582579|GPR142;nc|ENSG00000257008|Q7Z601|GPR142	ENSG00000257008|ENST00000582579|GPR142	ENSG00000257008|ENST00000582579|GPR142	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	426.2457275390625	2	426.247286	850.48002	0.55578	0.0002369	-3.442	-0.0014671	-2.8862	-0.0012302	426.24575751127946	87.37	3.4516	87.816	85.746	89.198	0.44628					161	83	2	0	0	0	0.81548	1	10307	10307		20.482	0	1	2779100			66691	8903	44325	44344	75894	75894					0.048798816372254805
YLLFSLMLF	9	Unmodified	_YLLFSLMLF_					0	0	0			REV__ENSG00000116906|ENST00000366647|GNPAT	REV__ENSG00000116906|ENST00000366647|GNPAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	574.3154907226562	2	573.817021	1145.61949	0.47618	0.00027324	-0.46118	-0.00026464	0.014992	8.6027E-06	573.8166032618375	36.182	1.0397	36.213	35.726	36.765	0.031132					71	29	3	0	0	0	0.76996	1	2005	2005		33.516	3.1979	1	967530	+		66692	18233	44326	44345	75895	75895					0.05250502930243783
YLLHLLRRHK	10	Unmodified	_YLLHLLRRHK_					0	0	0		ENST00000451963.1_2_7:99818153-99818871:+|nuORF;ENSG00000213413|ENST00000699088|PVRIG;nc|ENSG00000213413|Q6DKI7|PVRIG	ENST00000451963.1_2_7:99818153-99818871:+|nuORF	ENST00000451963.1_2_7:99818153-99818871:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	450.2843933105469	3	450.282329	1347.82516	-1.7867	-0.00080451	3.6219	0.0016309	1.8352	0.00082637	450.2837313529022	46.491	0.75829	46.491	46.198	46.956	0					36	18	3	0	0	0	0.88463	1	3521	3521		11.636	1.0491	1	112660			66693	8589	44327	44346	75896	75896					0.16515837224551433
YLLKLLDIIG	10	Unmodified	_YLLKLLDIIG_					0	0	0		ENST00000371146.5_1_1:62916657-62916786:+|nuORF	ENST00000371146.5_1_1:62916657-62916786:+|nuORF	ENST00000371146.5_1_1:62916657-62916786:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8656616210938	2	580.8681	1159.72165	-1.8878	-0.0010966	-1.8563	-0.0010783	-3.7441	-0.0021748	580.8667247469302	62.592	1.1317	62.98	62.183	63.315	0.38779					63	25	4	0	0	0	0.28217	4	6674	6654;6664;6674;6699		74.255	30.138	1	930800			66694	10660	44328	44347	75897;75898;75899;75900	75899					0.14817492273527932
YLLKLLDIIG	10	Unmodified	_YLLKLLDIIG_					0	0	0		ENST00000371146.5_1_1:62916657-62916786:+|nuORF	ENST00000371146.5_1_1:62916657-62916786:+|nuORF	ENST00000371146.5_1_1:62916657-62916786:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	580.8668212890625	2	580.8681	1159.72165	-0.64777	-0.00037627	-3.3312	-0.001935	-3.979	-0.0023113	580.8660675480357	62.454	0.90882	63.009	62.214	63.123	0.55449					53	20	3	0	0	0	0.51302	1	6658	6658		54.776	20.604	1	770700			66695	10660	44328	44347	75901	75901					0.14817492273527932
YLLLLFLHE	9	Unmodified	_YLLLLFLHE_					0	0	0		ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	580.8397216796875	2	580.839342	1159.66413	-0.88113	-0.0005118	2.8819	0.0016739	2.0008	0.0011621	580.8408357600173	69.895	0.91608	69.925	69.626	70.542	0.030502					112	46	3	0	0	0	0.7932	1	6596	6596		24.203	0	1	15247000			66696	2594	44329	44348	75902	75902					0.09068650067933959
YLLLLLLMK	9	Unmodified	_YLLLLLLMK_					0	0	0			REV__ENSG00000189320|ENST00000338588|FAM180A	REV__ENSG00000189320|ENST00000338588|FAM180A	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.34033203125	2	560.364139	1118.71372	1.3849	0.00077605	-0.41873	-0.00023464	0.96616	0.0005414	560.3640058738789	102.73	0.127	102.77	102.71	102.83	0.043198					4	2	2	0	0	0	0.20789	1	11120	11120		13.775	3.5101	1	71757	+		66697	23078	44330	44349	75903	75903					0.15911641752404648
YLLLNQQRL	9	Unmodified	_YLLLNQQRL_					0	0	0		ENST00000367478.8_1_1:186324789-186324840:-|nuORF	ENST00000367478.8_1_1:186324789-186324840:-|nuORF	ENST00000367478.8_1_1:186324789-186324840:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	580.8408203125	2	580.842948	1159.67134	-0.43283	-0.00025141	-3.7117	-0.0021559	-4.1445	-0.0024073	580.8405993802119	69.859	0.92783	69.822	69.57	70.498	-0.036957					124	48	3	0	0	0	0.69914	1	6814	6814		40.573	7.7602	1	18374000			66698	10547	44331	44350	75904	75904					0.09789382668373037
YLLLRVPV	8	Unmodified	_YLLLRVPV_					0	0	0			REV__ENSG00000164062|ENST00000296456|APEH	REV__ENSG00000164062|ENST00000296456|APEH	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	486.3619079589844	2	486.81567	971.616788	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.57	1	112.67	112.17	113.17	0.10638								0	0	0	0.30674	1	12120	12120		15.636	6.1657	1		+		66699	21020	44332	44351	75905	75905					0.12984415587607145
YLLLTLFRISD	11	Unmodified	_YLLLTLFRISD_					0	0	0		ENST00000199448.8_2_7:37990187-37990421:+|nuORF	ENST00000199448.8_2_7:37990187-37990421:+|nuORF	ENST00000199448.8_2_7:37990187-37990421:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.9322814941406	3	451.930739	1352.77039	1.5302	0.00069156	2.9338	0.0013259	4.464	0.0020174	451.9318754869845	98.716	1.9362	99.092	97.914	99.851	0.37679					102	47	3	0	0	0	0.74771	1	11950	11950		22.562	2.5311	1	364790			66700	9093	44333	44352	75906	75906					0.10811360842626527
YLLPAIVHI	9	Unmodified	_YLLPAIVHI_					0	0	0		nc|ENSG00000100201|Q92841-3|DDX17;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;ENSG00000100201|ENST00000403230|DDX17;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENSG00000108654|ENST00000225792|DDX5	nc|ENSG00000100201|Q92841-3|DDX17	nc|ENSG00000100201|Q92841-3|DDX17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	519.8198852539062	2	519.820953	1037.62735	0.10897	5.6647E-05	-1.7595	-0.00091464	-1.6506	-0.000858	519.8179795761217	82.398	1.142	82.825	82.43	83.572	0.42646					88	27	5	0	0	0	0.72098	1	9544	9544		39.021	1.993	1	614770			66701	14810	44334	44353	75907	75907					0.11004398242016578
YLLPAIVHI	9	Unmodified	_YLLPAIVHI_					0	0	0		nc|ENSG00000100201|Q92841-3|DDX17;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;ENSG00000100201|ENST00000403230|DDX17;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENSG00000108654|ENST00000225792|DDX5	nc|ENSG00000100201|Q92841-3|DDX17	nc|ENSG00000100201|Q92841-3|DDX17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	519.8184814453125	2	519.820953	1037.62735	0.10124	5.2627E-05	-3.2642	-0.0016968	-3.1629	-0.0016441	519.8181109395899	82.412	1.1485	82.886	82.511	83.66	0.47383					73	27	3	0	0	0	0.55559	1	9566	9566		49.211	3.2385	1	712380			66702	14810	44334	44353	75908	75908					0.11004398242016578
YLLPNIGRT	9	Unmodified	_YLLPNIGRT_					0	0	0		ENSG00000275832|ENST00000622683|ARHGAP23;nc|ENSG00000275832|Q9P227-2|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	ENSG00000275832|ENST00000622683|ARHGAP23	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.8035278320312	2	523.803291	1045.59203	0.49936	0.00026157	-1.4122	-0.00073971	-0.91282	-0.00047814	523.8026738718781	31.393	0.89777	31.436	31.141	32.038	0.043074					32	20	2	0	0	0	0.35373	1	2141	2141		60.972	5.4677	1	373270			66703	9007	44335	44354	75909	75909					0.07105735714230832
YLMNLTLSL	9	Unmodified	_YLMNLTLSL_					0	0	0		nc|ENSG00000163564|Q6K0P9-6|PYHIN1;nc|ENSG00000163564|Q6K0P9-5|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.287353515625	2	534.293911	1066.57327	-0.84612	-0.00045208	2.4862	0.0013284	1.6401	0.00087629	534.2950257281035	86.29	1.6851	86.744	86.076	87.761	0.45429					54	40	2	0	0	0	0.20789	1	10105	10105		27.882	13.017	1	96328			66704	15048	44336	44355	75910	75910					0.042644380281672056
YLMNLTLSL	9	Unmodified	_YLMNLTLSL_					0	0	0		nc|ENSG00000163564|Q6K0P9-6|PYHIN1;nc|ENSG00000163564|Q6K0P9-5|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	534.293911	1066.57327	-0.77608	-0.00041466	2.3158	0.0012373	1.5398	0.00082268	534.2951206111758	86.857	1.5169	86.857	86.038	87.555	0	0.24009	0.0010472	NaN	20.947	57	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99034			66705	15048	44336	44355							0.042644380281672056
YLMNLTLSL	9	Unmodified	_YLMNLTLSL_					0	0	0		nc|ENSG00000163564|Q6K0P9-6|PYHIN1;nc|ENSG00000163564|Q6K0P9-5|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	534.293911	1066.57327	-0.043641	-2.3317E-05	1.7268	0.00092259	1.6831	0.00089928	534.2947872802526	86.533	1.7583	86.6	86.03	87.788	0.067444	-0.01651	0.00041768	NaN	20.947	67	40	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150220			66706	15048	44336	44355							0.042644380281672056
YLMNLTLSL	9	Unmodified	_YLMNLTLSL_					0	0	0		nc|ENSG00000163564|Q6K0P9-6|PYHIN1;nc|ENSG00000163564|Q6K0P9-5|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	534.293911	1066.57327	1.6731	0.00089394	-0.29221	-0.00015613	1.3809	0.00073782	534.2937204411364	86.657	1.6682	86.583	85.841	87.509	-0.074005	-0.033039	-0.0017398	NaN	20.947	70	38	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	146730			66707	15048	44336	44355							0.042644380281672056
YLMNLTLSL	9	Unmodified	_YLMNLTLSL_					0	0	0		nc|ENSG00000163564|Q6K0P9-6|PYHIN1;nc|ENSG00000163564|Q6K0P9-5|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	534.293911	1066.57327	1.0288	0.00054968	0.66307	0.00035427	1.6919	0.00090395	534.2942825096853	86.433	1.2813	86.489	85.803	87.084	0.055649	-0.12752	-0.00071896	NaN	20.947	53	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134300			66708	15048	44336	44355							0.042644380281672056
YLMNLTLSL	9	Unmodified	_YLMNLTLSL_					0	0	0		nc|ENSG00000163564|Q6K0P9-6|PYHIN1;nc|ENSG00000163564|Q6K0P9-5|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	534.293911	1066.57327	-0.017863	-9.5439E-06	1.2991	0.0006941	1.2812	0.00068455	534.2945600582863	86.351	1.3521	86.544	86.011	87.363	0.19379	-0.072052	-3.9305E-05	NaN	20.947	55	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	155650			66709	15048	44336	44355							0.042644380281672056
YLMNLTLSL	9	Unmodified	_YLMNLTLSL_					0	0	0		nc|ENSG00000163564|Q6K0P9-6|PYHIN1;nc|ENSG00000163564|Q6K0P9-5|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	534.293911	1066.57327	0.70904	0.00037884	0.64007	0.00034199	1.3491	0.00072082	534.2942699947173	86.411	1.7794	86.56	85.987	87.767	0.14902	-0.056007	-0.00074353	NaN	20.947	72	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115330			66710	15048	44336	44355							0.042644380281672056
YLMNLTLSL	9	Unmodified	_YLMNLTLSL_					0	0	0		nc|ENSG00000163564|Q6K0P9-6|PYHIN1;nc|ENSG00000163564|Q6K0P9-5|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	nc|ENSG00000163564|Q6K0P9-6|PYHIN1	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	534.293911	1066.57327	-1.4515	-0.00077555	2.8705	0.0015337	1.4189	0.00075813	534.2954475204509	86.243	1.5364	86.401	85.976	87.513	0.15851	-0.21502	0.0016398	NaN	20.947	55	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105510			66711	15048	44336	44355							0.042644380281672056
YLMSGKILRI	10	Unmodified	_YLMSGKILRI_					0	0	0		ENST00000254742.6_1_4:4249611-4249728:-|nuORF	ENST00000254742.6_1_4:4249611-4249728:-|nuORF	ENST00000254742.6_1_4:4249611-4249728:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	597.3573608398438	2	597.357376	1192.7002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.243	1	93.684	93.184	94.184	0.44099								0	0	0	0.45132	1	11106	11106		29.17	2.4771	1				66712	9323	44337	44356	75911	75911					0.11155783973163125
YLNHAGQYY	9	Unmodified	_YLNHAGQYY_					0	0	0		ENST00000315183.11_2_16:24835199-24835373:+|nuORF	ENST00000315183.11_2_16:24835199-24835373:+|nuORF	ENST00000315183.11_2_16:24835199-24835373:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.282958984375	2	564.759081	1127.50361	0.014929	8.431E-06	3.3462	0.0018898	3.3612	0.0018983	564.7608889280162	27.102	1.334	26.927	26.25	27.584	-0.17559					36	29	2	0	0	0	0.20789	1	1561	1561		38.806	19.703	1	60079			66713	9971	44338	44357	75912	75912					-0.055043045962293036
YLNSLVVLV	9	Unmodified	_YLNSLVVLV_					0	0	0		ENST00000423008.1_1_7:1203896-1204070:+|nuORF	ENST00000423008.1_1_7:1203896-1204070:+|nuORF	ENST00000423008.1_1_7:1203896-1204070:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.3100891113281	2	510.310418	1018.60628	-0.8684	-0.00044315	0.78903	0.00040265	-0.079373	-4.0505E-05	510.3105179641499	72.711	0.82422	73.097	72.75	73.575	0.38581					40	19	3	0	0	0	0.51307	1	8145	8145		51.335	5.3835	1	479730			66714	11493	44339	44358	75913	75913					0.09772388142528143
YLPLHLVIILY	11	Unmodified	_YLPLHLVIILY_					0	0	0		ENST00000334352.8_1_21:30397079-30400222:+|nuORF	ENST00000334352.8_1_21:30397079-30400222:+|nuORF	ENST00000334352.8_1_21:30397079-30400222:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	452.22845458984375	3	452.947842	1355.8217	4.3618	0.0019757	-2.9254	-0.0013251	1.4364	0.00065061	452.9463059805533	106.63	0.80959	106.78	106.4	107.21	0.14929					71	33	3	0	0	0	0.17754	1	13071	13071		15.333	0.5543	1	317310			66715	10148	44340	44359	75914	75914					0.15801729607346715
YLPPWKVF	8	Unmodified	_YLPPWKVF_					0	0	0			REV__ENST00000416120.1_1_6:64259201-64259360:-|nuORF	REV__ENST00000416120.1_1_6:64259201-64259360:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	526.2681884765625	2	525.294571	1048.57459	-0.1405	-7.3802E-05	4.1437	0.0021767	4.0032	0.0021029	525.2962219664817	56.855	0.38192	57.252	57.116	57.498	0.39672					12	8	2	0	0	0	0.4196	1	5906	5906		39.021	4.849	1	113130	+		66716	26429	44341	44360	75915	75915					0.05224440179222256
YLPSGCFTQLF	11	Unmodified	_YLPSGCFTQLF_					0	0	0			REV__ENSG00000074590|ENST00000261402|NUAK1;REV__ENSG00000163545|ENST00000367157|NUAK2	REV__ENSG00000074590|ENST00000261402|NUAK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	638.306396484375	2	638.307549	1274.60055	1.2037	0.00076834	-3.8076	-0.0024304	-2.6039	-0.0016621	638.3050492725451	78.106	0.74376	78.669	78.335	79.079	0.56332					38	17	3	0	0	0	0.55601	1	8959	8959		47.96	2.0076	1	500400	+		66717	16692;20932	44342	44361	75916	75916					-0.02577078431454538
YLPSNLLKK	9	Unmodified	_YLPSNLLKK_					0	0	0		ENSG00000182255|ENST00000328224|KCNA4	ENSG00000182255|ENST00000328224|KCNA4	ENSG00000182255|ENST00000328224|KCNA4	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.3274536132812	2	538.329142	1074.64373	-1.4902	-0.00080221	-2.1212	-0.0011419	-3.6114	-0.0019441	538.3278535307704	113.32	6.698	113.27	113.24	119.94	-0.044777					389	158	3	0	0	0	0.78058	1	12647	12647		30.504	7.4612	1	4041000			66718	7440	44343	44362	75917	75917					0.10939479408125408
YLPVCKISH	9	Unmodified	_YLPVCKISH_					0	0	0			REV__ENSG00000125484|ENST00000372146|GTF3C4	REV__ENSG00000125484|ENST00000372146|GTF3C4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	530.7791137695312	2	530.28642	1058.55829	0.063953	3.3914E-05	2.3634	0.0012533	2.4273	0.0012872	530.2874983974226	56.715	0.60681	57.112	56.765	57.371	0.39672					23	13	2	0	0	0	0.20789	1	5899	5899		32.812	3.6629	1	334030	+		66719	18646	44344	44363	75918	75918					0.03134990950820793
YLPVFLLYL	9	Unmodified	_YLPVFLLYL_					0	0	0			REV__nc|ENSG00000166451|Q96H22-3|CENPN	REV__nc|ENSG00000166451|Q96H22-3|CENPN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	570.8389892578125	2	570.838811	1139.66307	0.24304	0.00013874	-0.22341	-0.00012753	0.019631	1.1206E-05	570.8387431841412	50.551	0.65606	50.999	50.682	51.338	0.44761					39	15	4	0	0	0	0.78292	1	4986	4986		29.842	0.67148	1	2779100	+		66720	30004	44345	44364	75919	75919					0.09882435699068992
YLQHIKKP	8	Unmodified	_YLQHIKKP_					0	0	0			REV__nc|ENSG00000168016|O15050|TRANK1	REV__nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	513.808837890625	2	513.808377	1025.6022	-0.18035	-9.2668E-05	1.1688	0.00060056	0.98848	0.00050789	513.8088832223315	49.715	1.7578	49.718	49.103	50.861	0.0035934					120	43	4	0	0	0	0.81548	1	4276	4276		20.482	0.48506	1	1777300	+		66721	21451	44346	44365	75920	75920					0.09042343439477918
YLQRKLFSQNT	11	Unmodified	_YLQRKLFSQNT_					0	0	0		ENSG00000124279|ENST00000264669|FASTKD3	ENSG00000124279|ENST00000264669|FASTKD3	ENSG00000124279|ENST00000264669|FASTKD3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	466.592041015625	3	466.589376	1396.7463	-0.11305	-5.2749E-05	-0.066105	-3.0844E-05	-0.17916	-8.3592E-05	466.589270448406	58.418	0.72167	58.404	58.111	58.833	-0.013641					61	25	4	0	0	0	0.74771	1	5364	5364		22.562	2.2466	1	239310			66722	3327	44347	44366	75921	75921					0.06379520408950157
YLRDHVTTVP	10	Unmodified	_YLRDHVTTVP_					0	0	0			REV__ENSG00000157653|ENST00000374165|C9orf43	REV__ENSG00000157653|ENST00000374165|C9orf43	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	600.8259887695312	2	600.822212	1199.62987	-0.59314	-0.00035637	4.4207	0.002656	3.8275	0.0022997	600.8246934286947	75.242	1.8025	75.242	74.627	76.429	0					174	65	4	0	0	0	0.80179	1	6896	6896		39.253	1.7447	1	825510	+		66723	20557	44348	44367	75922	75922					0.038042019090198664
YLRIAVEVV	9	Unmodified	_YLRIAVEVV_					0	0	0		ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	ENSG00000151413|ENST00000281081|NUBPL	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	531.318359375	2	531.321317	1060.62808	-0.033063	-1.7567E-05	-3.6466	-0.0019375	-3.6797	-0.0019551	531.3191547732448	95.172	2.5483	95.24	94.714	97.262	0.068336					181	59	5	0	0	0	0.78058	1	10044	10044		30.504	8.5438	1	3878900			66724	5115	44349	44368	75923	75923					0.1001919289108173
YLRLINRW	8	Unmodified	_YLRLINRW_					0	0	0		nc|ENSG00000151572|Q32M45-3|ANO4;nc|ENSG00000151572|Q32M45-2|ANO4;ENSG00000151572|ENST00000392977|ANO4	nc|ENSG00000151572|Q32M45-3|ANO4	nc|ENSG00000151572|Q32M45-3|ANO4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	567.3306274414062	2	567.33255	1132.65055	-1.2007	-0.00068122	-3.1311	-0.0017764	-4.3318	-0.0024576	567.3306880391549	90.586	2.9229	90.656	88.714	91.637	0.069328					284	69	6	0	0	0	0.95912	1	9365	9365		4.3163	0.63193	1	5763000			66725	5126	44350	44369	75924	75924					0.08952837079368692
YLRLRKAA	8	Unmodified	_YLRLRKAA_					0	0	0		ENST00000473629.6_1_11:124492979-124496722:+|nuORF;ENST00000452080.5_1_11:124492979-124496602:+|nuORF;ENSG00000154144|ENST00000441174|TBRG1	ENST00000473629.6_1_11:124492979-124496722:+|nuORF	ENST00000473629.6_1_11:124492979-124496722:+|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	495.81585693359375	2	495.813993	989.613434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.322	1	24.38	23.88	24.88	0.058167								0	0	0	0.30125	1	834	834		20.482	6.7065	1				66726	5256	44351	44370	75925	75925					0.11821165533592648
YLRVHAEKL	9	Unmodified	_YLRVHAEKL_					0	0	0			REV__nc|ENSG00000104368|P00750-4|PLAT	REV__nc|ENSG00000104368|P00750-4|PLAT	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.8317260742188	2	564.82984	1127.64513	-0.64095	-0.00036203	4.062	0.0022943	3.421	0.0019323	564.8319455630552	66.491	0.41823	66.536	66.356	66.774	0.045113					32	19	2	0	0	0	0.71772	1	5891	5891		39.253	4.1008	1	150640	+		66727	15921	44352	44371	75926	75926					0.08641113496878461
YLSIASHR	8	Unmodified	_YLSIASHR_					0	0	0			REV__ENST00000588404.5_1_19:38907704-38910742:-|nuORF	REV__ENST00000588404.5_1_19:38907704-38910742:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	474.2346496582031	2	473.758884	945.503215	-0.29202	-0.00013835	0.94987	0.00045001	0.65785	0.00031166	473.75965181424857	23.116	0.65585	23.064	22.831	23.487	-0.052114					37	21	2	0	0	0	0.82464	1	775	775		21.702	0	1	26412	+		66728	29141	44353	44372	75927	75927					0.028283204745775947
YLSPVRSPK	9	Unmodified	_YLSPVRSPK_					0	0	0		ENSG00000139687|ENST00000267163|RB1	ENSG00000139687|ENST00000267163|RB1	ENSG00000139687|ENST00000267163|RB1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.8034057617188	2	523.803291	1045.59203	-0.10972	-5.7471E-05	0.03608	1.8899E-05	-0.073639	-3.8572E-05	523.8031397720157	31.461	0.69073	31.541	31.165	31.856	0.079834					34	15	3	0	0	0	0.51592	1	2135	2135		51.193	8.7966	1	250230			66729	4390	44354	44373	75928	75928					0.07105735714230832
YLSSLVGT	8	Unmodified	_YLSSLVGT_					0	0	0		nc|ENSG00000011143|Q9NXB0-2|MKS1;nc|ENSG00000011143|Q9NXB0-3|MKS1;ENSG00000011143|ENST00000393119|MKS1	nc|ENSG00000011143|Q9NXB0-2|MKS1	nc|ENSG00000011143|Q9NXB0-2|MKS1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2274169921875	2	420.229094	838.443634	-1.7925	-0.00075327	-1.0357	-0.00043521	-2.8282	-0.0011885	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.884	1	7483	7483		33.516	0	1	831720			66730	782	44355	44374	75929	75929					0.01795004740540662
YLTLRSVLP	9	Unmodified	_YLTLRSVLP_					0	0	0			REV__nc|ENSG00000146701|P40926-2|MDH2	REV__nc|ENSG00000146701|P40926-2|MDH2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	531.3187255859375	2	531.321317	1060.62808	-1.5129	-0.00080386	-2.153	-0.0011439	-3.6659	-0.0019478	531.3198552399973	94.964	2.533	95.167	94.65	97.183	0.20242					171	59	5	0	0	0	0.78983	1	9689	9689		27.882	6.1965	1	2353400	+		66731	20028	44356	44375	75930	75930					0.10019192891104467
YLTRLNKL	8	Unmodified	_YLTRLNKL_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	510.8139343261719	2	510.813659	1019.61277	0.13633	6.964E-05	-1.697	-0.00086687	-1.5607	-0.00079723	510.812662560253	79.014	0.80726	79.425	79.014	79.822	0.41059					43	18	3	0	0	0	0.87479	1	9060	9060		30.504	0	1	776270	+		66732	23202	44357	44376	75931	75931					0.10374326093892705
YLTRLSFG	8	Unmodified	_YLTRLSFG_					0	0	0			REV__nc|ENSG00000040199|Q6ZVD8-2|PHLPP2	REV__nc|ENSG00000040199|Q6ZVD8-2|PHLPP2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.7633056640625	2	478.763635	955.512717	-0.019765	-9.4628E-06	-0.19455	-9.3141E-05	-0.21431	-0.0001026	478.76333815385567	51.126	0.7417	51.878	51.614	52.356	0.75174					42	17	3	0	0	0	0.9295	1	5096	5096		55.504	0	1	1765200	+		66733	16314	44358	44377	75932	75932					0.03318088760090632
YLVENNAN	8	Unmodified	_YLVENNAN_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	468.7231140136719	2	468.724707	935.43486	0.56743	0.00026597	-3.7241	-0.0017456	-3.1567	-0.0014796	468.72291499922926	77.981	1.1018	78.118	77.808	78.91	0.13667					89	33	4	0	0	0	0.8347	1	7356	7356		23.042	1.0826	1	747220			66734	6458	44359	44378	75933	75933					-0.03543968895951366
YLVFIKPSSL	10	Unmodified	_YLVFIKPSSL_					0	0	0		ENST00000486166.1_1_X:16870817-16871009:-|nuORF	ENST00000486166.1_1_X:16870817-16871009:-|nuORF	ENST00000486166.1_1_X:16870817-16871009:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	583.8436279296875	2	583.844625	1165.6747	0.97491	0.00056919	3.4103	0.0019911	4.3852	0.0025603	583.8462335453149	105.71	0.63963	105.85	105.5	106.14	0.13821					27	16	2	0	0	0	0.86763	1	12896	12896		26.693	0	1	126680			66735	12573	44360	44379	75934	75934					0.0984863272237817
YLVKLKSLSL	10	Unmodified	_YLVKLKSLSL_					0	0	0		nc|ENSG00000171509|Q9HBX9-5|RXFP1;nc|ENSG00000171509|Q9HBX9-2|RXFP1;ENSG00000171509|ENST00000307765|RXFP1	nc|ENSG00000171509|Q9HBX9-5|RXFP1	nc|ENSG00000171509|Q9HBX9-5|RXFP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	582.35400390625	2	582.373549	1162.73255	0.72018	0.00041942	2.8708	0.0016719	3.5909	0.0020913	582.3752006398006	103.08	0.15743	103.26	103.12	103.28	0.18298					6	3	2	0	0	0	0.37624	1	10884	10884		15.642	0	1	938430			66736	6677	44361	44380	75935	75935					0.15768894647817433
YLVLERYLWLL	11	Unmodified	_YLVLERYLWLL_					0	0	0		ENSG00000147262|ENST00000682440|GPR119	ENSG00000147262|ENST00000682440|GPR119	ENSG00000147262|ENST00000682440|GPR119	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.6458435058594	3	494.290267	1479.84897	-0.72927	-0.00036047	-3.5754	-0.0017673	-4.3047	-0.0021278	494.2883940643035	18.006	0.2842	18.05	17.897	18.181	0.044046					32	14	3	0	0	0	0.17911	1	297	297		18.531	8.8849	1	91014			66737	4894	44362	44381	75936	75936					0.1282421314772364
YLVLYKHNQK	10	Unmodified	_YLVLYKHNQK_					0	0	0			REV__ENST00000276704.5_1_8:124232301-124232343:-|nuORF	REV__ENST00000276704.5_1_8:124232301-124232343:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.2490539550781	3	435.915312	1304.72411	1.026	0.00044724	-3.9232	-0.0017102	-2.8972	-0.0012629	435.9135040455985	33.079	0.87504	33.078	32.826	33.701	-0.0016365					45	20	3	0	0	0	0.37624	1	1920	1920		22.58	0	1	121590	+		66738	24585	44363	44382	75937	75937					0.08393340731163335
YLVMDQAI	8	Unmodified	_YLVMDQAI_					0	0	0			REV__nc|ENSG00000133256|P35913-3|PDE6B	REV__nc|ENSG00000133256|P35913-3|PDE6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	476.743408203125	2	476.744053	951.473554	0.57978	0.00027641	-4.1087	-0.0019588	-3.5289	-0.0016824	476.7419159080956	78.559	0.63667	78.696	78.31	78.947	0.13688					26	17	2	0	0	0	0.88915	1	7417	7417		35.201	1.6851	1	77406	+		66739	19068	44364	44383	75938	75938					-0.004123795857935875
YLVPIRPST	9	Unmodified	_YLVPIRPST_					0	0	0			REV__ENST00000371241.5_1_10:97170518-97192246:-|nuORF	REV__ENST00000371241.5_1_10:97170518-97192246:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	523.7888793945312	2	523.305667	1044.59678	0.827	0.00043277	-1.0524	-0.00055071	-0.22537	-0.00011794	523.8062500317966	55.081	0.6693	55.482	55.154	55.824	0.40102					16	10	2	0	0	0	0.20789	1	5665	5665		40.778	0	1	193890	+		66740	24835	44365	44384	75939	75939					0.0762661985700106
YLWKVILFTN	10	Unmodified	_YLWKVILFTN_					0	0	0			REV__ENST00000306072.9_1_15:89198758-89198920:+|nuORF	REV__ENST00000306072.9_1_15:89198758-89198920:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.8744506835938	2	648.871174	1295.72779	-1.1412	-0.00074051	1.65	0.0010706	0.50877	0.00033012	648.8725280227517	99.334	2.2334	99.52	98.635	100.87	0.18582					120	51	3	0	0	0	0.74274	1	10336	10336		42.396	2.338	1	245270	+		66741	24829	44366	44385	75940	75940					0.09176010505052545
YLWLKFSLII	10	Unmodified	_YLWLKFSLII_					0	0	0		ENST00000478112.1_1_10:71211350-71243770:+|nuORF;ENSG00000099282|ENST00000373290|TSPAN15	ENST00000478112.1_1_10:71211350-71243770:+|nuORF	ENST00000478112.1_1_10:71211350-71243770:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	648.3969116210938	2	648.391742	1294.76893	-1.1411	-0.00073988	2.087	0.0013532	0.94594	0.00061334	648.3929003164395	113.32	6.698	113.27	113.24	119.94	-0.044777					386	158	3	0	0	0	0.85438	1	12293	12293		16.473	0.83134	1	2297700			66742	1752	44367	44386	75941	75941					0.1333377154453501
YLWYDTGVA	9	Unmodified	_YLWYDTGVA_					0	0	0			REV__ENSG00000006116|ENST00000005284|CACNG3	REV__ENSG00000006116|ENST00000005284|CACNG3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	544.4948120117188	2	544.258382	1086.50221	-1.4804	-0.00080572	-2.7765	-0.0015111	-4.2569	-0.0023168	544.2568096961087	44.329	0.19559	45.173	45.027	45.222	0.84437					6	4	2	0	0	0	0.20789	1	4055	4055		25.45	8.0852	1	84194	+		66743	16096	44368	44387	75942	75942					-0.0375793868497567
YLYEQEGGI	9	Unmodified	_YLYEQEGGI_					0	0	0			REV__ENST00000498713.1_1_3:15711779-15717570:-|nuORF	REV__ENST00000498713.1_1_3:15711779-15717570:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	535.2672729492188	2	536.253297	1070.49204	2.3208	0.0012445	2.6467	0.0014193	4.9675	0.0026639	536.2545468942645	25.632	0.63031	25.201	24.895	25.525	-0.4311					24	14	2	0	0	0	0.20789	1	1364	1364		34.173	0	1	173390	+		66744	23594	44369	44388	75943	75943					-0.04038546410242816
YLYHVRKC	8	Unmodified	_YLYHVRKC_					0	0	0		nc|ENSG00000243943|Q96ME7-2|ZNF512;ENSG00000243943|ENST00000355467|ZNF512;ENST00000505973.1_1_2:27821100-27852768:+|nuORF;nc|ENSG00000243943|Q96ME7-3|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	nc|ENSG00000243943|Q96ME7-2|ZNF512	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	541.285888671875	2	541.284211	1080.55387	0.28155	0.0001524	1.9088	0.0010332	2.1904	0.0011856	541.2850882224766	21.553	0.80586	21.11	20.734	21.54	-0.44324					49	18	3	0	0	0	0.89457	1	772	772		37.028	1.8765	1	332750			66745	8815	44370	44389	75944	75944					0.016815265279319647
YLYKHRRRPKV	11	Unmodified	_YLYKHRRRPKV_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	505.9745788574219	3	505.972155	1514.89463	2.9436	0.0014894	0.78266	0.000396	3.7263	0.0018854	505.97247130566444	107.89	0.59716	107.86	107.34	107.94	-0.031487					54	14	6	0	0	0	0.74771	1	11958	11958		22.562	12.915	1	180330000			66746	3201	44371	44390	75945	75945					0.15778296173289164
YLYKHRRRPKV	11	Unmodified	_YLYKHRRRPKV_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	505.97418212890625	3	505.972155	1514.89463	0.14933	7.5555E-05	4.0706	0.0020596	4.2199	0.0021352	505.97413818936155	107.88	0.86302	107.92	107.11	107.97	0.035622					68	20	5	0	0	0	0.80813	1	11827	11827		9.6461	0.84683	1	155850000			66747	3201	44371	44390	75946	75946					0.15778296173289164
YMASKLKIKW	10	Oxidation (M)	_YM(Oxidation (M))ASKLKIKW_		YM(1)ASKLKIKW		YM(41)ASKLKIKW	0	0	1			REV__ENSG00000255374|ENST00000531678|TAS2R43	REV__ENSG00000255374|ENST00000531678|TAS2R43	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.8602905273438	2	642.362659	1282.71076	2.6974	0.0017327	-3.6955	-0.0023738	-0.99812	-0.00064115	642.359695370679	114.18	2.3126	114.16	113.46	115.77	-0.024452					163	86	2	0	0	0	0.77314	1	12609	12609		40.778	10.275	1	464940	+		66748	23898	44372	44391	75947	75947		371			0.08071766627540455
YMEKLWLK	8	Unmodified	_YMEKLWLK_					0	0	0		nc|ENSG00000169064|A8MT70-3|ZBBX;nc|ENSG00000169064|A8MT70|ZBBX;ENSG00000169064|ENST00000675490|ZBBX	nc|ENSG00000169064|A8MT70-3|ZBBX	nc|ENSG00000169064|A8MT70-3|ZBBX	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	555.8055419921875	2	555.804445	1109.59434	0.2531	0.00014067	3.207	0.0017824	3.4601	0.0019231	555.8062035865635	59.386	0.70735	59.48	59.191	59.898	0.094059					50	20	3	0	0	0	0.9295	1	5094	5094		55.504	2.1528	1	269860			66749	6466	44373	44392	75948	75948					0.04392448127669013
YMKQMTFEAQA	11	Unmodified	_YMKQMTFEAQA_					0	0	0		ENSG00000135842|ENST00000367511|NIBAN1	ENSG00000135842|ENST00000367511|NIBAN1	ENSG00000135842|ENST00000367511|NIBAN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	449.8729248046875	3	449.873908	1346.59989	0.13716	6.1705E-05	-1.825	-0.00082103	-1.6879	-0.00075932	449.87300168712073	20.004	0.59515	19.374	19.168	19.764	-0.6296					22	12	3	0	0	0	0.70278	1	599	599		31.068	3.5145	1	193440			66750	4058	44374	44393	75949	75949					-0.05954241142785577
YMLKYEEEK	9	Unmodified	_YMLKYEEEK_					0	0	0			REV__ENST00000573989.1_1_17:7834648-7835228:-|nuORF	REV__ENST00000573989.1_1_17:7834648-7835228:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	617.302978515625	2	616.797014	1231.57948	-0.062797	-3.8733E-05	3.2168	0.0019841	3.154	0.0019454	616.7987436689413	45.977	0.73335	45.959	45.66	46.393	-0.018585					37	17	3	0	0	0	0.7932	1	3693	3693		24.519	0.31644	1	259660	+		66751	28965	44375	44394	75950	75950					-0.027050885310018202
YMSHGALDGF	10	Unmodified	_YMSHGALDGF_					0	0	0		ENST00000432874.7_2_1:38185627-38187503:-|nuORF;ENST00000446149.6_1_1:38181546-38201012:-|nuORF;nc|ENSG00000183317|Q5JZY3-3|EPHA10;ENSG00000183317|ENST00000373048|EPHA10	ENST00000432874.7_2_1:38185627-38187503:-|nuORF	ENST00000432874.7_2_1:38185627-38187503:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.303955078125	2	549.239667	1096.46478	0.15784	8.6693E-05	2.1343	0.0011722	2.2921	0.0012589	549.2407930545502	57.925	0.56996	58.478	58.267	58.837	0.55323					19	13	2	0	0	0	0.37624	1	6039	6039		51.335	30.389	1	118080			66752	7522	44376	44395	75951	75951					-0.07959353222258869
YMTICRYLY	9	Unmodified	_YMTICRYLY_					0	0	0			REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	613.2905883789062	2	613.290845	1224.56714	-1.3794	-0.000846	1.2432	0.00076244	-0.13624	-8.3554E-05	613.2915277669886	62.628	1.114	62.656	62.34	63.454	0.028133					142	52	4	0	0	0	0.14386	1	5847	5847		84.916	0	1	983250	+		66753	23430	44377	44396	75952	75952					-0.03616403475007246
YMTTGVLLQKI	11	Oxidation (M)	_YM(Oxidation (M))TTGVLLQKI_		YM(1)TTGVLLQKI		YM(44)TTGVLLQKI	0	0	1		nc|ENSG00000156414|Q8NDG6-2|TDRD9;ENSG00000156414|ENST00000409874|TDRD9	nc|ENSG00000156414|Q8NDG6-2|TDRD9	nc|ENSG00000156414|Q8NDG6-2|TDRD9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3616943359375	2	641.857406	1281.70026	1.7061	0.001095	1.7571	0.0011278	3.4631	0.0022228	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.60058	1	12727	12727		44.377	7.9304	1	27133000			66754	5377	44378	44397	75953	75953		93			0.07067739182502919
YNASCSVPE	9	Carbamidomethyl (C)	_YNASC(Carbamidomethyl (C))SVPE_	YNASC(1)SVPE		YNASC(42)SVPE		0	1	0		nc|ENSG00000221994|Q2M218-2|ZNF630;ENSG00000221994|ENST00000276054|ZNF630	nc|ENSG00000221994|Q2M218-2|ZNF630	nc|ENSG00000221994|Q2M218-2|ZNF630	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	513.7109985351562	2	513.713482	1025.41241	-0.36307	-0.00018651	-3.3059	-0.0016983	-3.669	-0.0018848	513.7117372856758	35.228	0.53154	35.171	34.853	35.384	-0.056385					25	12	3	0	0	0	0.67345	1	2277	2277		42.396	10.441	1	76448			66755	8694	44379	44398	75954	75954	107				-0.0992793635587077
YNKYIQKP	8	Unmodified	_YNKYIQKP_					0	0	0		ENSG00000182749|ENST00000675840|PAQR7	ENSG00000182749|ENST00000675840|PAQR7	ENSG00000182749|ENST00000675840|PAQR7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	527.2911987304688	2	527.290017	1052.56548	0.63153	0.000333	-0.86832	-0.00045785	-0.23678	-0.00012485	527.2894037871584	53.195	0.78617	53.609	53.332	54.119	0.4139					38	18	3	0	0	0	0.90465	1	5378	5378		40.573	4.9543	1	995190			66756	7471	44380	44399	75955	75955					0.04130046822888289
YNLENVVNL	9	Unmodified	_YNLENVVNL_					0	0	0			REV__ENST00000511724.1_1_5:102509577-102524329:+|nuORF	REV__ENST00000511724.1_1_5:102509577-102524329:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.2828369140625	2	539.282389	1076.55022	0.30068	0.00016215	-1.3445	-0.00072506	-1.0438	-0.00056291	539.2814888705664	40.82	0.70604	40.901	40.655	41.361	0.081345					54	25	3	0	0	0	0.64555	1	2617	2617		44.377	3.8046	1	641090	+		66757	19961	44381	44400	75956	75956					0.01501135235048423
YNLRQRKTV	9	Unmodified	_YNLRQRKTV_					0	0	0		ENSG00000119778|ENST00000238789|ATAD2B;nc|ENSG00000119778|Q9ULI0-2|ATAD2B	ENSG00000119778|ENST00000238789|ATAD2B	ENSG00000119778|ENST00000238789|ATAD2B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	589.3429565429688	2	589.343646	1176.67274	-0.6745	-0.00039751	-0.65118	-0.00038377	-1.3257	-0.00078128	589.3431227139873	94.35	5.9591	94.418	93.415	99.374	0.068344					464	139	4	0	0	0	0.77244	1	10038	10038		32.812	0	1	16185000			66758	3096	44382	44401	75957	75957					0.09147016757128767
YNLRQRKTV	9	Unmodified	_YNLRQRKTV_					0	0	0		ENSG00000119778|ENST00000238789|ATAD2B;nc|ENSG00000119778|Q9ULI0-2|ATAD2B	ENSG00000119778|ENST00000238789|ATAD2B	ENSG00000119778|ENST00000238789|ATAD2B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.343017578125	2	589.343646	1176.67274	0.82336	0.00048524	-2.0045	-0.0011814	-1.1812	-0.00069612	589.3423328864844	93.97	5.376	94.411	93.354	98.73	0.44099					412	133	4	0	0	0	0.78124	1	11468	11468		30.318	1.1477	1	9460500			66759	3096	44382	44401	75958	75958					0.09147016757128767
YNQTSMGLLKS	11	Unmodified	_YNQTSMGLLKS_					0	0	0			REV__nc|ENSG00000183621|Q7Z4V0-3|ZNF438	REV__nc|ENSG00000183621|Q7Z4V0-3|ZNF438	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	621.313720703125	2	621.313363	1240.61217	-0.62331	-0.00038727	1.3377	0.00083114	0.71441	0.00044387	621.3140085474115	68.614	0.80863	68.647	68.364	69.173	0.033005					72	32	3	0	0	0	0.72739	1	6593	6593		27.047	0.3544	1	488350	+		66760	22618	44383	44402	75959	75959					0.001491185918894189
YNSRIAIRSTV	11	Unmodified	_YNSRIAIRSTV_					0	0	0		ENST00000462715.1_1_1:36602709-36602835:-|nuORF	ENST00000462715.1_1_1:36602709-36602835:-|nuORF	ENST00000462715.1_1_1:36602709-36602835:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	640.359130859375	2	640.359493	1278.70443	0.92817	0.00059436	-1.9336	-0.0012382	-1.0054	-0.00064384	640.3581311699245	99.187	2.3145	99.344	98.588	100.9	0.15659					178	53	4	0	0	0	0.61369	1	10395	10395		42.864	4.1107	1	603720			66761	12048	44384	44403	75960	75960					0.0762296472039452
YNTISYRKIRK	11	Unmodified	_YNTISYRKIRK_					0	0	0		ENSG00000136541|ENST00000410096|ERMN;nc|ENSG00000136541|Q8TAM6-2|ERMN	ENSG00000136541|ENST00000410096|ERMN	ENSG00000136541|ENST00000410096|ERMN	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	481.284423828125	3	481.280654	1440.82013	0.97179	0.0004677	3.7084	0.0017848	4.6802	0.0022525	481.2823210671387	23.946	0.4237	23.564	23.327	23.75	-0.38178					27	9	4	0	0	0	0.77205	1	1118	1118		17.167	4.2093	1	112450			66762	4118	44385	44404	75961	75961					0.11735488571252972
YNTISYRKIRK	11	Unmodified	_YNTISYRKIRK_					0	0	0		ENSG00000136541|ENST00000410096|ERMN;nc|ENSG00000136541|Q8TAM6-2|ERMN	ENSG00000136541|ENST00000410096|ERMN	ENSG00000136541|ENST00000410096|ERMN	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	481.280654	1440.82013	0.68872	0.00033147	3.7072	0.0017842	4.396	0.0021157	481.2824508430906	23.815	0.46378	23.241	23.009	23.472	-0.57415	-0.16148	-7.215E-07	NaN	17.167	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	139000			66763	4118	44385	44404							0.11735488571252972
YPAEITLTW	9	Unmodified	_YPAEITLTW_					0	0	0		ENST00000495183.5_1_6:29910749-29913287:+|nuORF;ENST00000606273.3_1_6:29692860-29693788:+|nuORF;ENST00000494367.1_1_6:29976031-29977313:+|nuORF;ENST00000383620.4_1_6:29857122-29858256:+|nuORF;ENST00000470363.5_1_6:31237527-31238194:-|nuORF;ENST00000484704.5_1_6:29691969-29693843:+|nuORF;nc|ENSG00000204525|P10321-2|HLA-C;ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;ENSG00000234745|ENST00000412585|HLA-B;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;nc|ENSG00000204642|P30511|HLA-F;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000204592|ENST00000376630|HLA-E;nc|ENSG00000206341|P01893|HLA-H	ENST00000495183.5_1_6:29910749-29913287:+|nuORF;nc|ENSG00000204525|P10321-2|HLA-C;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000204642|P30511|HLA-F;ENSG00000204592|ENST00000376630|HLA-E;nc|ENSG00000206341|P01893|HLA-H	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	547.2820434570312	2	547.281857	1092.54916	0.205	0.00011219	-0.086555	-4.737E-05	0.11845	6.4823E-05	547.2816677950606	89.43	0.79111	89.881	89.448	90.239	0.45058					54	19	4	0	0	0	0.0036154	2	10550	10550;10562		138.48	47.703	1	2790400			66764	8464;8454;8557;12762;8474;15225	44386	44405	75962;75963	75962					0.006589208661353041
YPAEITLTW	9	Unmodified	_YPAEITLTW_					0	0	0		ENST00000495183.5_1_6:29910749-29913287:+|nuORF;ENST00000606273.3_1_6:29692860-29693788:+|nuORF;ENST00000494367.1_1_6:29976031-29977313:+|nuORF;ENST00000383620.4_1_6:29857122-29858256:+|nuORF;ENST00000470363.5_1_6:31237527-31238194:-|nuORF;ENST00000484704.5_1_6:29691969-29693843:+|nuORF;nc|ENSG00000204525|P10321-2|HLA-C;ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;ENSG00000234745|ENST00000412585|HLA-B;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206503|P04439-2|HLA-A;nc|ENSG00000204642|P30511|HLA-F;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000204592|ENST00000376630|HLA-E;nc|ENSG00000206341|P01893|HLA-H	ENST00000495183.5_1_6:29910749-29913287:+|nuORF;nc|ENSG00000204525|P10321-2|HLA-C;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000204642|P30511|HLA-F;ENSG00000204592|ENST00000376630|HLA-E;nc|ENSG00000206341|P01893|HLA-H	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.2822265625	2	547.281857	1092.54916	-1.5555	-0.00085129	1.6646	0.00091102	0.10913	5.9724E-05	547.2826352476769	89.413	1.0192	89.883	89.195	90.214	0.47069					57	24	4	0	0	0	4.5683999999999995E-21	2	10600	10588;10600		183.89	77.479	1	2834800			66765	8464;8454;8557;12762;8474;15225	44386	44405	75964;75965	75965					0.006589208661353041
YPAFGGAK	8	Unmodified	_YPAFGGAK_					0	0	0			REV__CON__P04258	REV__CON__P04258	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	405.70965576171875	2	405.710871	809.407189	0.22666	9.1957E-05	-0.97192	-0.00039432	-0.74526	-0.00030236	405.7107569363125	27.427	0.25979	27.456	27.329	27.589	0.028172					16	12	2	0	0	0	0.86791	1	1087	1087		28.254	4.0515	1	21807	+	+	66766	15978	44387	44406	75966	75966					-0.005138273655120429
YPAFGGAK	8	Unmodified	_YPAFGGAK_					0	0	0			REV__CON__P04258	REV__CON__P04258	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	405.710871	809.407189	-0.35399	-0.00014362	3.2671	0.0013255	2.9131	0.0011819	405.7110873816187	27.746	0.24216	27.708	27.515	27.757	-0.038523	0.034016	0.0031708	NaN	28.254	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9423.6	+	+	66767	15978	44387	44406							-0.005138273655120429
YPAFGGAK	8	Unmodified	_YPAFGGAK_					0	0	0			REV__CON__P04258	REV__CON__P04258	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	405.710871	809.407189	2.7671	0.0011227	-2.8092	-0.0011397	-0.042126	-1.7091E-05	405.7098855443914	27.882	0.41823	27.858	27.649	28.067	-0.023556	0.1842	-0.0017597	NaN	28.254	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11691	+	+	66768	15978	44387	44406							-0.005138273655120429
YPAFGGAK	8	Unmodified	_YPAFGGAK_					0	0	0			REV__CON__P04258	REV__CON__P04258	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	405.710871	809.407189	0.22666	9.1957E-05	-0.97192	-0.00039432	-0.74526	-0.00030236	405.7107569363125	27.427	0.25979	27.456	27.329	27.589	0.028172	-0.21821	-0.00026883	NaN	28.254	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21807	+	+	66769	15978	44387	44406							-0.005138273655120429
YPAKSGAL	8	Unmodified	_YPAKSGAL_					0	0	0		nc|ENSG00000130413|Q9BYT3-2|STK33;ENSG00000130413|ENST00000687296|STK33	nc|ENSG00000130413|Q9BYT3-2|STK33	nc|ENSG00000130413|Q9BYT3-2|STK33	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	403.72406005859375	2	403.723978	805.433404	-1.1089	-0.00044771	1.5518	0.00062651	0.44287	0.0001788	403.7244510631445	64.933	1.6766	64.971	63.905	65.582	0.037849					135	64	4	0	0	0	0.91472	1	5701	5701		44.117	3.5442	1	1390300			66770	3645	44388	44407	75967	75967					0.022904418059511045
YPCTPKIFV	9	Unmodified	_YPCTPKIFV_					0	0	0			REV__ENSG00000173221|ENST00000237858|GLRX	REV__ENSG00000173221|ENST00000237858|GLRX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	534.2801513671875	2	534.283346	1066.55214	-0.042715	-2.2822E-05	1.5053	0.00080427	1.4626	0.00078145	534.2839567595911	110.67	1.0072	110.61	110.26	111.26	-0.055077					42	33	2	0	0	0	0.78058	1	12022	12022		30.504	0	1	97154	+		66771	21903	44389	44408	75968	75968					0.021524727192854698
YPCYDSGCSCI	11	Unmodified	_YPCYDSGCSCI_					0	0	0			REV__nc|ENSG00000188659|Q658L1|SAXO2	REV__nc|ENSG00000188659|Q658L1|SAXO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	605.715087890625	2	605.71431	1209.41407	-0.47666	-0.00028872	3.078	0.0018644	2.6013	0.0015757	605.7161403227536	28.106	1.4431	28.082	27.514	28.957	-0.023558					74	36	3	0	0	0	0.76322	1	1360	1360		19.104	3.4617	1	302860	+		66772	30116	44390	44409	75969	75969					-0.18226386653782356
YPCYLPHFP	9	Unmodified	_YPCYLPHFP_					0	0	0			REV__ENST00000492782.5_1_7:50437257-50437431:+|nuORF	REV__ENST00000492782.5_1_7:50437257-50437431:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.7654418945312	2	568.76532	1135.51609	0.77917	0.00044317	-0.78273	-0.00044519	-0.0035538	-2.0213E-06	568.7647838120163	83.726	1.9818	83.657	83.085	85.067	-0.069313					114	45	4	0	0	0	0.72098	1	8600	8600		39.021	0.26789	1	1633100	+		66773	27677	44391	44410	75970	75970					-0.046249844575640964
YPDGVETR	8	Unmodified	_YPDGVETR_					0	0	0			REV__ENST00000586054.2_1_19:2272735-2272846:+|nuORF	REV__ENST00000586054.2_1_19:2272735-2272846:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	468.7232971191406	2	468.724707	935.43486	-0.75515	-0.00035396	-1.6747	-0.00078499	-2.4299	-0.001139	468.7237161519137	93.418	1.0486	93.868	93.278	94.327	0.44988					49	24	3	0	0	0	0.87479	1	11154	11154		30.504	1.3541	1	570630	+		66774	29098	44392	44411	75971	75971					-0.03543968895939997
YPDRIMNTF	9	Unmodified	_YPDRIMNTF_					0	0	0		ENSG00000196230|ENST00000327892|TUBB;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;ENSG00000258947|ENST00000315491|TUBB3	ENSG00000196230|ENST00000327892|TUBB	ENSG00000196230|ENST00000327892|TUBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	578.7747802734375	2	578.776416	1155.53828	-1.8672	-0.0010807	2.0918	0.0012107	0.22462	0.00013001	578.7775353231121	59.053	0.78515	59.445	59.107	59.892	0.39209					51	18	4	0	0	0	2.0213E-05	5	6193	6193;6205;6217;6229;6242		154.12	63.342	1	1446700			66775	8029	44393	44412	75972;75973;75974;75975;75976	75972					-0.033268047797946565
YPDRIMNTF	9	Unmodified	_YPDRIMNTF_					0	0	0		ENSG00000196230|ENST00000327892|TUBB;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;ENSG00000258947|ENST00000315491|TUBB3	ENSG00000196230|ENST00000327892|TUBB	ENSG00000196230|ENST00000327892|TUBB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	578.7762451171875	2	578.776416	1155.53828	-1.0416	-0.00060286	1.4102	0.0008162	0.36861	0.00021334	578.7771222743659	58.924	1.1514	59.477	59.047	60.199	0.55323					56	28	3	0	0	0	0.010555	4	6225	6201;6213;6225;6237		132.76	31.546	1	1490400			66776	8029	44393	44412	75977;75978;75979;75980	75979					-0.033268047797946565
YPENEEMES	9	Unmodified	_YPENEEMES_					0	0	0			REV__ENSG00000135956|ENST00000258439|TMEM127	REV__ENSG00000135956|ENST00000258439|TMEM127	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	564.2119140625	2	564.213511	1126.41247	-0.4718	-0.00026619	-2.0952	-0.0011822	-2.567	-0.0014484	564.212164350343	29.046	0.95419	29.017	28.65	29.604	-0.029209					45	21	4	0	0	0	0.43338	1	1820	1820		55.504	7.8469	1	1297900	+		66777	19274	44394	44413	75981	75981					-0.1456798114652429
YPFIRRVF	8	Unmodified	_YPFIRRVF_					0	0	0		ENST00000608756.5_1_3:122145607-122145709:+|nuORF	ENST00000608756.5_1_3:122145607-122145709:+|nuORF	ENST00000608756.5_1_3:122145607-122145709:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3182373046875	2	549.316369	1096.61818	0.85079	0.00046735	1.4363	0.00078896	2.287	0.0012563	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.83466	1	10522	10522		23.037	1.351	1	2023500			66778	14476	44395	44414	75982	75982					0.07374049676354844
YPFIRRVF	8	Unmodified	_YPFIRRVF_					0	0	0		ENST00000608756.5_1_3:122145607-122145709:+|nuORF	ENST00000608756.5_1_3:122145607-122145709:+|nuORF	ENST00000608756.5_1_3:122145607-122145709:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	549.3192138671875	2	549.316369	1096.61818	-1.4544	-0.00079891	3.7562	0.0020634	2.3019	0.0012645	549.3183390022904	100.83	2.1772	101	100.59	102.77	0.16939					143	53	4	0	0	0	0.87276	1	10587	10587		29.842	0.67148	1	2310400			66779	14476	44395	44414	75983	75983					0.07374049676354844
YPFKPPKITF	10	Unmodified	_YPFKPPKITF_					0	0	0		nc|ENSG00000185651|P68036-3|UBE2L3;nc|ENSG00000185651|P68036-2|UBE2L3;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF	nc|ENSG00000185651|P68036-3|UBE2L3	nc|ENSG00000185651|P68036-3|UBE2L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.2375793457031	3	413.237504	1236.69068	0.35709	0.00014756	-0.0084327	-3.4847E-06	0.34866	0.00014408	413.23745881108846	64.253	1.497	64.64	63.617	65.114	0.3868					78	34	3	0	0	0	0.42897	2	6924	6924;6946		61.691	16.669	1	158460			66780	15152	44396	44415	75984;75985	75984					0.08180338959255096
YPFKPPKITF	10	Unmodified	_YPFKPPKITF_					0	0	0		nc|ENSG00000185651|P68036-3|UBE2L3;nc|ENSG00000185651|P68036-2|UBE2L3;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF	nc|ENSG00000185651|P68036-3|UBE2L3	nc|ENSG00000185651|P68036-3|UBE2L3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.2385559082031	3	413.237504	1236.69068	0.16244	6.7128E-05	0.3414	0.00014108	0.50385	0.00020821	413.2375184256399	64.055	1.3084	64.61	63.755	65.064	0.55449					70	30	3	0	0	0	0.5442	1	6902	6902		53.089	5.8613	1	154500			66781	15152	44396	44415	75986	75986					0.08180338959255096
YPFKPPKVAF	10	Unmodified	_YPFKPPKVAF_					0	0	0		ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000131508|P62837-2|UBE2D2;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000078967|ENST00000222402|UBE2D4;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3	ENST00000511691.1_1_5:138980019-139003047:+|nuORF	ENST00000511691.1_1_5:138980019-139003047:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3340454101562	2	597.33951	1192.66447	-0.20889	-0.00012478	0.29315	0.00017511	0.084255	5.0329E-05	597.3393578790444	58.538	1.3804	59.091	58.428	59.809	0.55323					85	33	4	0	0	0	0.43769	1	6187	6187		60.972	16.855	1	643080			66782	1409	44397	44416	75987	75987					0.07584069787799308
YPFKPPKVTF	10	Unmodified	_YPFKPPKVTF_					0	0	0		ENSG00000182247|ENST00000396703|UBE2E2;ENSG00000170035|ENST00000410062|UBE2E3;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1;ENSG00000170142|ENST00000306627|UBE2E1	ENSG00000182247|ENST00000396703|UBE2E2	ENSG00000182247|ENST00000396703|UBE2E2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	408.565673828125	3	408.56562	1222.67503	0.034194	1.397E-05	-0.058543	-2.3919E-05	-0.024349	-9.9482E-06	408.56549298002915	59.306	2.2925	59.697	58.314	60.606	0.39077					159	56	4	0	0	0	0.081562	9	6283	6188;6218;6234;6246;6258;6271;6283;6296;6309		104.01	29.849	1	2305100			66783	6553	44398	44417	75988;75989;75990;75991;75992;75993;75994;75995;75996	75994					0.07260052442211418
YPFKPPKVTF	10	Unmodified	_YPFKPPKVTF_					0	0	0		ENSG00000182247|ENST00000396703|UBE2E2;ENSG00000170035|ENST00000410062|UBE2E3;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1;ENSG00000170142|ENST00000306627|UBE2E1	ENSG00000182247|ENST00000396703|UBE2E2	ENSG00000182247|ENST00000396703|UBE2E2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	408.5660705566406	3	408.56562	1222.67503	-0.39584	-0.00016173	0.30475	0.00012451	-0.09109	-3.7216E-05	408.56563093399086	59.121	2.2176	59.675	58.47	60.688	0.55323					152	55	4	0	0	0	0.22362	7	6258	6175;6236;6248;6258;6270;6280;6294		81.525	19.76	1	2031100			66784	6553	44398	44417	75997;75998;75999;76000;76001;76002;76003	76000					0.07260052442211418
YPFKPPKVTF	10	Unmodified	_YPFKPPKVTF_					0	0	0		ENSG00000182247|ENST00000396703|UBE2E2;ENSG00000170035|ENST00000410062|UBE2E3;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1;ENSG00000170142|ENST00000306627|UBE2E1	ENSG00000182247|ENST00000396703|UBE2E2	ENSG00000182247|ENST00000396703|UBE2E2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	612.3441772460938	2	612.344792	1222.67503	0.0022523	1.3792E-06	0.0092992	5.6943E-06	0.011552	7.0735E-06	612.3445106355542	59.258	1.1911	59.811	59.047	60.239	0.55323					69	29	3	0	0	0	0.20518	1	6229	6229		72.879	11.907	1	677310			66785	6553	44398	44417	76004	76004					0.07260052442211418
YPFKPPKVTF	10	Unmodified	_YPFKPPKVTF_					0	0	0		ENSG00000182247|ENST00000396703|UBE2E2;ENSG00000170035|ENST00000410062|UBE2E3;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1;ENSG00000170142|ENST00000306627|UBE2E1	ENSG00000182247|ENST00000396703|UBE2E2	ENSG00000182247|ENST00000396703|UBE2E2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	612.344792	1222.67503	-0.4801	-0.00029399	0.09446	5.7842E-05	-0.38564	-0.00023615	612.3446745264299	59.316	1.1502	59.707	59.065	60.215	0.39077	-0.052172	5.2308E-05	NaN	72.879	63	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	684800			66786	6553	44398	44417							0.07260052442211418
YPFRVGELEY	10	Unmodified	_YPFRVGELEY_					0	0	0		nc|ENSG00000168016|O15050|TRANK1;ENSG00000168016|ENST00000645898|TRANK1	nc|ENSG00000168016|O15050|TRANK1	nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	637.3177490234375	2	636.816596	1271.61864	-0.18766	-0.0001195	-0.1366	-8.6988E-05	-0.32426	-0.00020649	636.8167306887456	70.329	1.0667	70.713	70.311	71.378	0.38416					51	25	3	0	0	0	0.16188	2	7784	7784;7795		93.598	31.49	1	542740			66787	6357	44399	44418	76005;76006	76005					-0.0063062018509754125
YPFRVGELEY	10	Unmodified	_YPFRVGELEY_					0	0	0		nc|ENSG00000168016|O15050|TRANK1;ENSG00000168016|ENST00000645898|TRANK1	nc|ENSG00000168016|O15050|TRANK1	nc|ENSG00000168016|O15050|TRANK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	636.8165893554688	2	636.816596	1271.61864	1.0427	0.000664	0.025214	1.6057E-05	1.0679	0.00068006	636.8162225236348	70.286	0.98228	70.833	70.383	71.366	0.54694					55	24	4	0	0	0	0.31985	1	7812	7812		70.816	35.198	1	560040			66788	6357	44399	44418	76007	76007					-0.0063062018509754125
YPGCINLSFAY	11	Unmodified	_YPGCINLSFAY_					0	0	0		ENST00000471137.1_1_20:34262270-34262515:-|nuORF;nc|ENSG00000244005|Q9Y697-2|NFS1;nc|ENSG00000244005|Q9Y697-3|NFS1;ENSG00000244005|ENST00000374092|NFS1	ENST00000471137.1_1_20:34262270-34262515:-|nuORF	ENST00000471137.1_1_20:34262270-34262515:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	624.2939453125	2	624.291899	1246.56925	1.285	0.00080223	0.68207	0.00042581	1.9671	0.001228	624.2922374307117	69.424	0.62526	69.56	69.206	69.831	0.13521					82	28	4	0	0	0	0.53495	1	6280	6280		49.442	1.7842	1	3007800			66789	8817	44400	44419	76008	76008					-0.04417651465541894
YPHERYGGR	9	Unmodified	_YPHERYGGR_					0	0	0			REV__ENSG00000112232|ENST00000281156|KHDRBS2	REV__ENSG00000112232|ENST00000281156|KHDRBS2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	566.7974853515625	2	567.775597	1133.53664	-0.030243	-1.7171E-05	3.0994	0.0017598	3.0692	0.0017426	567.7768373256351	79.756	0.55127	80.172	79.913	80.464	0.41621					22	12	2	0	0	0	0.20789	1	9113	9113		20.947	7.4929	1	157370	+		66790	17928	44401	44420	76009	76009					-0.024786777535382498
YPHSLPSSL	9	Unmodified	_YPHSLPSSL_					0	0	0			REV__ENST00000366479.3_1_1:248201943-248202102:+|nuORF	REV__ENST00000366479.3_1_1:248201943-248202102:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	500.75836181640625	2	500.758549	999.502546	-1.3172	-0.00065958	0.68494	0.00034299	-0.63223	-0.00031659	500.7587895465759	61.762	0.92741	62.151	61.825	62.752	0.38846					40	20	3	0	0	0	0.78058	1	6587	6587		30.504	0	1	227420	+		66791	25524	44402	44421	76010	76010					0.002774810348682877
YPHSLPSSL	9	Unmodified	_YPHSLPSSL_					0	0	0			REV__ENST00000366479.3_1_1:248201943-248202102:+|nuORF	REV__ENST00000366479.3_1_1:248201943-248202102:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	500.758549	999.502546	-1.3172	-0.00065958	0.68494	0.00034299	-0.63223	-0.00031659	500.7587895465759	61.762	0.92741	62.151	61.825	62.752	0.38846	0.016839	0.00021502	NaN	30.504	40	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	227420	+		66792	25524	44402	44421							0.002774810348682877
YPHSLPSSL	9	Unmodified	_YPHSLPSSL_					0	0	0			REV__ENST00000366479.3_1_1:248201943-248202102:+|nuORF	REV__ENST00000366479.3_1_1:248201943-248202102:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	500.758549	999.502546	-0.0049006	-2.454E-06	-0.6724	-0.00033671	-0.6773	-0.00033916	500.75805905933964	61.563	0.71744	62.117	61.885	62.602	0.55386	-0.016839	-0.0011444	NaN	30.504	32	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	190400	+		66793	25524	44402	44421							0.002774810348682877
YPIEHGIIT	9	Unmodified	_YPIEHGIIT_					0	0	0		ENSG00000159251|ENST00000290378|ACTC1;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000143632|ENST00000366684|ACTA1;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000428275.1_1_X:53172740-53172956:-|nuORF	ENSG00000159251|ENST00000290378|ACTC1	ENSG00000159251|ENST00000290378|ACTC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7818603515625	2	521.782025	1041.5495	-0.36396	-0.00018991	-0.15338	-8.0029E-05	-0.51734	-0.00026994	521.781827522837	48.002	1.084	48.925	48.503	49.587	0.92315					72	26	4	0	0	0	0.47272	1	4604	4604		53.351	3.3269	1	8503600			66794	2370	44403	44422	76011	76011					0.030383405859993218
YPIEISLLI	9	Unmodified	_YPIEISLLI_					0	0	0			REV__ENSG00000158125|ENST00000379416|XDH	REV__ENSG00000158125|ENST00000379416|XDH	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	530.8202514648438	2	530.818076	1059.6216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.37	1	116.43	115.93	116.93	0.059448								0	0	0	0.31828	1	12360	12360		24.203	0	1		+		66795	20590	44404	44423	76012	76012					0.09417254939717168
YPIFTPKEKK	10	Unmodified	_YPIFTPKEKK_					0	0	0			REV__nc|ENSG00000109111|Q7KZ85-2|SUPT6H	REV__nc|ENSG00000109111|Q7KZ85-2|SUPT6H	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	625.85986328125	2	625.860806	1249.70706	0.76695	0.00048001	-2.8995	-0.0018147	-2.1325	-0.0013347	625.8590492635708	21.812	0.36678	21.184	20.982	21.349	-0.62834					15	8	2	0	0	0	0.85441	1	826	826		5.9211	0	1	84240	+		66796	17747	44405	44424	76013	76013					0.09219420125350553
YPISHAAAPTP	11	Unmodified	_YPISHAAAPTP_					0	0	0			REV__ENSG00000088888|ENST00000428216|MAVS	REV__ENSG00000088888|ENST00000428216|MAVS	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	562.79150390625	2	562.790381	1123.56621	-0.2369	-0.00013332	0.20434	0.000115	-0.032553	-1.8321E-05	562.7904291195925	54.758	0.76003	54.732	54.368	55.128	-0.025955					34	23	2	0	0	0	0.64498	1	4958	4958		39.253	3.6345	1	119420	+		66797	16952	44406	44425	76014	76014					0.009368414719347129
YPISHAAAPTP	11	Unmodified	_YPISHAAAPTP_					0	0	0			REV__ENSG00000088888|ENST00000428216|MAVS	REV__ENSG00000088888|ENST00000428216|MAVS	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	562.790381	1123.56621	-1.2112	-0.00068165	0.91574	0.00051537	-0.29545	-0.00016628	562.7910246246227	54.797	0.64039	54.79	54.481	55.121	-0.0077095	-0.014279	0.00080923	NaN	39.253	29	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129910	+		66798	16952	44406	44425							0.009368414719347129
YPISHAAAPTP	11	Unmodified	_YPISHAAAPTP_					0	0	0			REV__ENSG00000088888|ENST00000428216|MAVS	REV__ENSG00000088888|ENST00000428216|MAVS	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	562.790381	1123.56621	-0.2369	-0.00013332	0.20434	0.000115	-0.032553	-1.8321E-05	562.7904291195925	54.758	0.76003	54.732	54.368	55.128	-0.025955	-0.071429	8.4939E-06	NaN	39.253	34	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119420	+		66799	16952	44406	44425							0.009368414719347129
YPISHAAAPTP	11	Unmodified	_YPISHAAAPTP_					0	0	0			REV__ENSG00000088888|ENST00000428216|MAVS	REV__ENSG00000088888|ENST00000428216|MAVS	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	562.790381	1123.56621	0.28504	0.00016042	-0.33179	-0.00018673	-0.046749	-2.631E-05	562.7903303544546	54.823	0.65551	54.85	54.502	55.158	0.027138	0.046184	-0.00059496	NaN	39.253	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119630	+		66800	16952	44406	44425							0.009368414719347129
YPISHAAAPTP	11	Unmodified	_YPISHAAAPTP_					0	0	0			REV__ENSG00000088888|ENST00000428216|MAVS	REV__ENSG00000088888|ENST00000428216|MAVS	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	562.790381	1123.56621	0.34581	0.00019462	-0.99019	-0.00055727	-0.64438	-0.00036265	562.7901957581017	54.862	0.37813	54.918	54.614	54.992	0.055614	0.11387	-0.001336	NaN	39.253	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	198030	+		66801	16952	44406	44425							0.009368414719347129
YPISHAAAPTP	11	Unmodified	_YPISHAAAPTP_					0	0	0			REV__ENSG00000088888|ENST00000428216|MAVS	REV__ENSG00000088888|ENST00000428216|MAVS	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	562.790381	1123.56621	-0.229	-0.00012888	1.694	0.00095335	1.465	0.00082447	563.2931585854889	54.779	0.38106	54.729	54.493	54.874	-0.049271	-0.074342	0.0016852	NaN	39.253	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89078	+		66802	16952	44406	44425							0.009368414719347129
YPKIRIEGT	9	Unmodified	_YPKIRIEGT_					0	0	0		nc|ENSG00000155657|Q8WZ42-12|TTN;ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN	nc|ENSG00000155657|Q8WZ42-12|TTN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	538.8062133789062	2	538.808574	1075.60259	-1.4886	-0.00080208	-1.9733	-0.0010633	-3.462	-0.0018653	538.8074665953776	90.499	3.8427	90.679	89.09	92.933	0.18029					216	90	3	0	0	0	0.78058	1	8923	8923		30.504	0	1	783690			66803	5333;15007	44407	44426	76015	76015					0.06781718368642942
YPKTLILGY	9	Unmodified	_YPKTLILGY_					0	0	0			REV__ENSG00000175105|ENST00000636215|ZNF654	REV__ENSG00000175105|ENST00000636215|ZNF654	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	534.3073120117188	2	534.310418	1066.60628	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.094	1	50.124	49.624	50.624	0.029629								0	0	0	0.32159	1	3915	3915		23.042	0	1		+		66804	22039	44408	44427	76016	76016					0.07564388142509415
YPLDLEGGSEY	11	Unmodified	_YPLDLEGGSEY_					0	0	0		ENST00000466371.5_1_X:48339567-48341236:+|nuORF;nc|ENSG00000068438|Q9UET6-2|FTSJ1;ENSG00000068438|ENST00000348411|FTSJ1;ENST00000467954.5_1_X:48339852-48341236:+|nuORF;ENST00000490202.5_1_X:48339880-48341236:+|nuORF	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	621.7813110351562	2	621.779876	1241.5452	0.67234	0.00041805	-1.2704	-0.00078991	-0.59805	-0.00037186	621.7789997269384	73.689	0.73377	74.248	74.024	74.758	0.5589					30	17	2	0	0	0	0.64498	1	8345	8345		39.253	2.8061	1	372730			66805	1199	44409	44428	76017	76017					-0.06591213418209918
YPLDLEGGSEY	11	Unmodified	_YPLDLEGGSEY_					0	0	0		ENST00000466371.5_1_X:48339567-48341236:+|nuORF;nc|ENSG00000068438|Q9UET6-2|FTSJ1;ENSG00000068438|ENST00000348411|FTSJ1;ENST00000467954.5_1_X:48339852-48341236:+|nuORF;ENST00000490202.5_1_X:48339880-48341236:+|nuORF	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	ENST00000466371.5_1_X:48339567-48341236:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	621.779876	1241.5452	-0.31772	-0.00019755	0.062916	3.912E-05	-0.25481	-0.00015843	621.7798836291744	73.851	1.0793	74.239	73.829	74.908	0.38779	-0.0047644	0.00096852	NaN	39.253	56	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	359190			66806	1199	44409	44428							-0.06591213418209918
YPLDVQKEF	9	Unmodified	_YPLDVQKEF_					0	0	0		ENSG00000103061|ENST00000263997|SLC7A6OS	ENSG00000103061|ENST00000263997|SLC7A6OS	ENSG00000103061|ENST00000263997|SLC7A6OS	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	569.7930908203125	2	569.792589	1137.57063	0.10301	5.8695E-05	-2.2814	-0.0012999	-2.1784	-0.0012412	569.7920964130261	60.15	0.53758	60.703	60.428	60.965	0.55323					27	14	3	0	0	0	0.41984	1	6380	6380		56.434	15.656	1	291250			66807	2051	44410	44429	76018	76018					0.0073430589486633835
YPLDVQKEF	9	Unmodified	_YPLDVQKEF_					0	0	0		ENSG00000103061|ENST00000263997|SLC7A6OS	ENSG00000103061|ENST00000263997|SLC7A6OS	ENSG00000103061|ENST00000263997|SLC7A6OS	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	569.792589	1137.57063	-0.84984	-0.00048423	0.54494	0.0003105	-0.30491	-0.00017373	570.2947942894176	60.258	0.6024	60.648	60.373	60.975	0.39077	-0.027399	0.00091796	NaN	56.434	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	475140			66808	2051	44410	44429							0.0073430589486633835
YPLEDHTEF	9	Unmodified	_YPLEDHTEF_					0	0	0		nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	575.7529296875	2	575.756204	1149.49785	-0.24623	-0.00014177	0.031651	1.8223E-05	-0.21458	-0.00012354	575.7561655399309	54.991	0.79692	55.397	55.031	55.828	0.4055					40	18	3	0	0	0	0.080198	2	5626	5614;5626		97.473	22.956	1	1604800			66809	2532	44411	44430	76019;76020	76020					-0.0709144789855145
YPLEDHTEF	9	Unmodified	_YPLEDHTEF_					0	0	0		nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	nc|ENSG00000110514|Q8WXG6-6|MADD	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	575.7549438476562	2	575.756204	1149.49785	-0.53354	-0.00030719	0.47605	0.00027409	-0.057488	-3.3099E-05	575.7563867887447	54.773	0.79742	55.341	55.027	55.824	0.56836					44	18	3	0	0	0	0.053315	3	5605	5605;5616;5630		106.42	31.899	1	1960200			66810	2532	44411	44430	76021;76022;76023	76021					-0.0709144789855145
YPLLHALDT	9	Unmodified	_YPLLHALDT_					0	0	0			REV__ENSG00000167680|ENST00000586582|SEMA6B	REV__ENSG00000167680|ENST00000586582|SEMA6B	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.7821044921875	2	521.782025	1041.5495	-0.36396	-0.00018991	-0.15338	-8.0029E-05	-0.51734	-0.00026994	521.781827522837	48.002	1.084	48.925	48.503	49.587	0.92315					72	26	4	0	0	0	0.58151	1	4594	4594		47.916	0	1	8503600	+		66811	21415	44412	44431	76024	76024					0.030383405859765844
YPMLQIMLL	9	Unmodified	_YPMLQIMLL_					0	0	0			REV__ENST00000341049.6_1_7:116199659-116199932:+|nuORF	REV__ENST00000341049.6_1_7:116199659-116199932:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.808349609375	2	561.308506	1120.60246	-0.34103	-0.00019142	4.4705	0.0025093	4.1295	0.0023179	561.8121876312182	60.416	1.3094	60.806	60.013	61.322	0.38945					62	35	3	0	0	0	0.58151	1	6412	6412		47.916	0	1	1336500	+		66812	25253	44413	44432	76025	76025					0.04698259052793219
YPMRAYKL	8	Unmodified	_YPMRAYKL_					0	0	0		ENSG00000130449|ENST00000252744|ZSWIM6	ENSG00000130449|ENST00000252744|ZSWIM6	ENSG00000130449|ENST00000252744|ZSWIM6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.28271484375	2	521.281137	1040.54772	-1.7498	-0.00091212	3.2656	0.0017023	1.5158	0.00079016	521.2827715356772	42.58	0.70127	43.278	42.97	43.672	0.69754					29	16	2	0	0	0	0.84634	1	3815	3815		60.294	3.8602	1	1219500			66813	3646	44414	44433	76026	76026					0.02907008296369895
YPNPTFELL	9	Unmodified	_YPNPTFELL_					0	0	0		ENSG00000076356|ENST00000367033|PLXNA2	ENSG00000076356|ENST00000367033|PLXNA2	ENSG00000076356|ENST00000367033|PLXNA2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.2817993164062	2	547.281857	1092.54916	-0.41689	-0.00022816	-3.494	-0.0019122	-3.9108	-0.0021403	547.2798598639519	53.447	0.79269	54.062	53.696	54.489	0.61436					32	18	2	0	0	0	0.19818	1	5422	5422		74.255	14.137	1	729980			66814	1356	44415	44434	76027	76027					0.006589208661580415
YPNVNIHNF	9	Unmodified	_YPNVNIHNF_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.2747192382812	2	559.274898	1116.53524	-0.4687	-0.00026213	0.56664	0.00031691	0.097937	5.4773E-05	559.2750954811328	57.368	1.3734	57.762	57.026	58.399	0.39408					77	33	3	0	0	0	0.021087	3	5975	5949;5959;5975		124.59	42.354	1	1772900			66815	2832	44416	44435	76028;76029;76030	76030					-0.018363118422939806
YPNVNIHNF	9	Unmodified	_YPNVNIHNF_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	559.2753295898438	2	559.274898	1116.53524	0.59138	0.00033074	-0.54919	-0.00030715	0.042193	2.3597E-05	559.274413693815	57.186	1.5499	57.741	57.092	58.642	0.55512					75	37	3	0	0	0	1.1882E-08	4	5955	5943;5955;5968;5980		162.31	95.876	1	1594800			66816	2832	44416	44435	76031;76032;76033;76034	76032					-0.018363118422939806
YPQPPSQSY	9	Unmodified	_YPQPPSQSY_					0	0	0		ENSG00000138279|ENST00000372921|ANXA7;nc|ENSG00000138279|P20073|ANXA7	ENSG00000138279|ENST00000372921|ANXA7	ENSG00000138279|ENST00000372921|ANXA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.7461547851562	2	533.745639	1065.47673	0.4371	0.0002333	-0.20327	-0.00010849	0.23383	0.00012481	533.7453676378193	50.203	1.6847	50.651	49.446	51.131	0.44761					90	40	3	0	0	0	0.58668	1	4935	4935		47.657	4.7931	1	984120			66817	4285	44417	44436	76035	76035					-0.053394132074117806
YPRGRLSVHLR	11	Unmodified	_YPRGRLSVHLR_					0	0	0			REV__ENST00000406855.7_1_22:24177086-24180623:-|nuORF	REV__ENST00000406855.7_1_22:24177086-24180623:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	452.2668151855469	3	451.933588	1352.77894	1.2214	0.000552	-3.2611	-0.0014738	-2.0397	-0.00092181	451.9320610524432	100.69	2.8398	100.74	99.421	102.26	0.046356					205	66	5	0	0	0	0.72892	1	10740	10740		26.75	4.1881	1	1043200	+		66818	24970	44418	44437	76036	76036					0.11665772322430712
YPRHKHLLI	9	Unmodified	_YPRHKHLLI_					0	0	0		nc|ENSG00000132912|Q9UJW0-2|DCTN4;ENSG00000132912|ENST00000447998|DCTN4;nc|ENSG00000132912|Q9UJW0-3|DCTN4	nc|ENSG00000132912|Q9UJW0-2|DCTN4	nc|ENSG00000132912|Q9UJW0-2|DCTN4	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	588.85546875	2	588.85365	1175.69275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.355	1	16.403	15.903	16.903	0.047804								0	0	0	0.33676	1	143	143		18.324	0.062328	1				66819	3840	44419	44438	76037	76037					0.11192812487752235
YPRLAPKL	8	Unmodified	_YPRLAPKL_					0	0	0			REV__ENSG00000099960|ENST00000382932|SLC7A4	REV__ENSG00000099960|ENST00000382932|SLC7A4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	479.2976379394531	2	479.297645	956.580737	-0.46769	-0.00022416	0.69766	0.00033439	0.22997	0.00011022	479.2977943251352	57.596	1.6193	57.99	57.574	59.193	0.39407					92	39	4	0	0	0	0.91005	1	6009	6009		42.474	1.9018	1	5272200	+		66820	17119	44420	44439	76038	76038					0.10070958410744879
YPRQTFNTFTF	11	Unmodified	_YPRQTFNTFTF_					0	0	0		ENST00000371627.4_1_10:93602101-93604682:+|nuORF	ENST00000371627.4_1_10:93602101-93604682:+|nuORF	ENST00000371627.4_1_10:93602101-93604682:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	474.5628662109375	3	474.56646	1420.67755	-2.0537	-0.00097462	-2.6001	-0.0012339	-4.6538	-0.0022086	474.89953131694676	15.582	0.13622	15.582	15.518	15.654	0					10	5	3	0	0	0	0.74771	1	47	47		22.562	0.78116	1	33471			66821	10670	44421	44440	76039	76039					-0.01596143890787971
YPRYLVRRFIW	11	Unmodified	_YPRYLVRRFIW_					0	0	0			REV__nc|ENSG00000070985|Q9NZQ8-2|TRPM5	REV__nc|ENSG00000070985|Q9NZQ8-2|TRPM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.6349487304688	3	523.633139	1567.87759	0.25758	0.00013488	2.5925	0.0013575	2.8501	0.0014924	523.6344657480768	45.382	1.3027	45.364	44.968	46.271	-0.018585					106	30	5	0	0	0	0.8398	1	3552	3552		6.6596	0.65857	1	2480100	+		66822	16619	44422	44441	76040	76040					0.11636375567491086
YPSLQNKFLK	10	Unmodified	_YPSLQNKFLK_					0	0	0			REV__ENSG00000010219|ENST00000543431|DYRK4	REV__ENSG00000010219|ENST00000543431|DYRK4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.23675537109375	3	413.236163	1236.68666	0.16244	6.7128E-05	3.5863	0.001482	3.7488	0.0015491	413.2375184256399	64.055	1.3084	64.61	63.755	65.064	0.55449					70	30	3	0	0	0	0.86338	1	6942	6942		31.634	0	1	154500	+		66823	16158	44423	44442	76041	76041					0.07778249465559384
YPSPPGSP	8	Unmodified	_YPSPPGSP_					0	0	0		nc|ENSG00000104413|Q6NXG1-5|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;ENSG00000104413|ENST00000433389|ESRP1	nc|ENSG00000104413|Q6NXG1-5|ESRP1	nc|ENSG00000104413|Q6NXG1-5|ESRP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	401.1940612792969	2	401.192511	800.370469	0.56679	0.00022739	0.74714	0.00029975	1.3139	0.00052714	401.1927338671488	82.307	0.68785	82.453	82.025	82.713	0.1455					28	15	2	0	0	0	0.86288	1	7915	7915		26.796	0	1	176270			66824	2130	44424	44443	76042	76042					-0.03770123982087625
YPTDSRGEF	9	Unmodified	_YPTDSRGEF_					0	0	0		nc|ENSG00000129353|Q8IWA5-3|SLC44A2;ENSG00000129353|ENST00000335757|SLC44A2;nc|ENSG00000129353|Q8IWA5-2|SLC44A2	nc|ENSG00000129353|Q8IWA5-3|SLC44A2	nc|ENSG00000129353|Q8IWA5-3|SLC44A2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	536.2396240234375	2	536.240721	1070.46689	0.14351	7.6958E-05	-0.32986	-0.00017689	-0.18635	-9.9928E-05	536.2403637432138	53.545	0.95256	53.959	53.416	54.369	0.4139					48	22	3	0	0	0	0.58668	1	5431	5431		47.657	3.5405	1	1390800			66825	3585	44425	44444	76043	76043					-0.06552601212820264
YPTQPGQGY	9	Unmodified	_YPTQPGQGY_					0	0	0		ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS;ENSG00000089280|ENST00000254108|FUS	ENST00000487045.6_1_16:31191511-31194161:+|nuORF	ENST00000487045.6_1_16:31191511-31194161:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	505.7320556640625	2	505.732532	1009.45051	-0.83599	-0.00042279	0.37836	0.00019135	-0.45763	-0.00023144	505.7325988012904	45.717	1.0928	46.189	45.521	46.614	0.47139					66	26	4	0	0	0	0.38563	3	4239	4228;4239;4251		58.782	14.405	1	2762800			66826	1621	44426	44445	76044;76045;76046	76045					-0.05383682378896992
YPTQPGQGY	9	Unmodified	_YPTQPGQGY_					0	0	0		ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS;ENSG00000089280|ENST00000254108|FUS	ENST00000487045.6_1_16:31191511-31194161:+|nuORF	ENST00000487045.6_1_16:31191511-31194161:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	505.732421875	2	505.732532	1009.45051	0.10267	5.1924E-05	-0.5755	-0.00029105	-0.47283	-0.00023913	505.732093071723	45.461	1.0046	46.356	45.801	46.805	0.89542					59	24	3	0	0	0	0.55097	3	4228	4202;4216;4228		49.442	14.142	1	2809800			66827	1621	44426	44445	76047;76048;76049	76049					-0.05383682378896992
YPVEIHEY	8	Unmodified	_YPVEIHEY_					0	0	0		ENST00000485709.1_1_2:68273401-68290109:-|nuORF;ENSG00000197223|ENST00000410067|C1D;chr2:68053286-68062945|25|10.88|0.1|6.83|-|ENST00000407324|C1D,C1D	ENST00000485709.1_1_2:68273401-68290109:-|nuORF	ENST00000485709.1_1_2:68273401-68290109:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	525.2500610351562	2	525.250557	1048.48656	0.80869	0.00042476	-1.0104	-0.0005307	-0.20168	-0.00010593	525.2498588992363	50.637	0.61587	51.085	50.805	51.421	0.4476					41	14	4	0	0	0	0.019216	4	5003	4980;4991;5003;5018		133.47	51.229	1	1647500			66828	346	44427	44446	76050;76051;76052;76053	76052					-0.03574225202055459
YPVEIHEY	8	Unmodified	_YPVEIHEY_					0	0	0		ENST00000485709.1_1_2:68273401-68290109:-|nuORF;ENSG00000197223|ENST00000410067|C1D;chr2:68053286-68062945|25|10.88|0.1|6.83|-|ENST00000407324|C1D,C1D	ENST00000485709.1_1_2:68273401-68290109:-|nuORF	ENST00000485709.1_1_2:68273401-68290109:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	525.2508544921875	2	525.250557	1048.48656	1.0951	0.00057519	-1.1544	-0.00060636	-0.059329	-3.1163E-05	525.2498285123199	50.456	0.69305	51.208	50.921	51.614	0.75174					43	16	4	0	0	0	0.15891	4	4981	4970;4981;4993;5009		110.34	36.362	1	1854400			66829	346	44427	44446	76054;76055;76056;76057	76055					-0.03574225202055459
YPVEIHEYL	9	Unmodified	_YPVEIHEYL_					0	0	0		ENST00000485709.1_1_2:68273401-68290109:-|nuORF;ENSG00000197223|ENST00000410067|C1D;chr2:68053286-68062945|25|10.88|0.1|6.83|-|ENST00000407324|C1D,C1D	ENST00000485709.1_1_2:68273401-68290109:-|nuORF	ENST00000485709.1_1_2:68273401-68290109:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	581.7921142578125	2	581.792589	1161.57063	-1.1315	-0.00065828	1.1972	0.00069654	0.065756	3.8256E-05	581.7929987023159	65.088	1.27	65.474	64.482	65.752	0.38615					67	30	4	0	0	0	0.080198	5	7048	7028;7037;7048;7061;7086		97.473	43.119	1	1196500			66830	346	44428	44447	76058;76059;76060;76061;76062	76060					-0.003696941051430258
YPVEIHEYL	9	Unmodified	_YPVEIHEYL_					0	0	0		ENST00000485709.1_1_2:68273401-68290109:-|nuORF;ENSG00000197223|ENST00000410067|C1D;chr2:68053286-68062945|25|10.88|0.1|6.83|-|ENST00000407324|C1D,C1D	ENST00000485709.1_1_2:68273401-68290109:-|nuORF	ENST00000485709.1_1_2:68273401-68290109:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	581.791748046875	2	581.792589	1161.57063	-0.436	-0.00025366	0.33945	0.00019749	-0.096549	-5.6171E-05	581.7926613445853	64.921	0.69946	65.475	65.143	65.843	0.55386					45	17	3	0	0	0	0.14115	5	7049	7037;7049;7060;7073;7081		85.359	28.926	1	1051800			66831	346	44428	44447	76063;76064;76065;76066;76067	76064					-0.003696941051430258
YPVVRLPIP	9	Unmodified	_YPVVRLPIP_					0	0	0			REV__ENST00000401088.8_1_1:16722324-16722621:+|nuORF	REV__ENST00000401088.8_1_1:16722324-16722621:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	527.7651977539062	2	527.326402	1052.63825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.962	1	61.516	61.016	62.016	0.55386								0	0	0	0.2969	1	6506	6506		31.955	1.4512	1		+		66832	26256	44429	44448	76068	76068					0.11403800616312765
YPWDLTLF	8	Unmodified	_YPWDLTLF_					0	0	0		chr1:71075639-71076795|26|17.19|0.28|5.93|-|1|TE_info:L2,L2_dup1626,L2,LINE,acceptor,-,71075270,71075639|None,ZRANB2|4	chr1:71075639-71076795|26|17.19|0.28|5.93|-|1|TE_info:L2,L2_dup1626,L2,LINE,acceptor,-,71075270,71075639|None,ZRANB2|4	chr1:71075639-71076795|26|17.19|0.28|5.93|-|1|TE_info:L2,L2_dup1626,L2,LINE,acceptor,-,71075270,71075639|None,ZRANB2|4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	528.3283081054688	2	527.765843	1053.51713	-1.1213	-0.00059176	-4.101	-0.0021644	-5.2223	-0.0027561	527.7635357215803	44.08	0.60622	44.924	44.694	45.3	0.84438					30	14	3	0	0	0	0.4196	1	4049	4049		40.573	11.423	1	661860			66833	57	44430	44449	76069	76069					-0.007484468170105174
YQDSISLPW	9	Unmodified	_YQDSISLPW_					0	0	0		ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	ENSG00000135312|ENST00000369947|HTR1B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	554.7661743164062	2	554.769114	1107.52368	-0.77518	-0.00043005	-1.2395	-0.00068762	-2.0146	-0.0011177	554.7674856598604	34.629	0.76677	34.624	34.217	34.983	-0.0047417					36	19	3	0	0	0	0.7932	1	2111	2111		24.203	0.68005	1	107300			66834	4002	44431	44450	76070	76070					-0.025785536562807465
YQDVPLKITA	10	Unmodified	_YQDVPLKITA_					0	0	0			REV__ENSG00000205133|ENST00000521988|TRIQK	REV__ENSG00000205133|ENST00000521988|TRIQK	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	574.3196411132812	2	574.321514	1146.62847	-0.44784	-0.0002572	-2.9941	-0.0017196	-3.4419	-0.0019768	574.3196832768724	94.7	3.6597	94.7	93.326	96.986	0					214	85	3	0	0	0	0.86106	1	9421	9421		33.922	2.3918	1	1099700	+		66835	23542	44432	44451	76071	76071					0.06102567820266813
YQGLQFVYLSF	11	Unmodified	_YQGLQFVYLSF_					0	0	0		ENSG00000182272|ENST00000329962|B4GALNT4	ENSG00000182272|ENST00000329962|B4GALNT4	ENSG00000182272|ENST00000329962|B4GALNT4	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	455.6091613769531	3	455.567689	1363.68124	-0.17195	-7.8334E-05	-1.7448	-0.00079487	-1.9167	-0.0008732	455.5667976051812	70.979	0.62192	71.526	71.242	71.864	0.54756					32	14	3	0	0	0	0.1745	1	7877	7877		29.551	13.021	1	209830			66836	7444	44433	44452	76072	76072					0.013945258830744933
YQHTGAVL	8	Unmodified	_YQHTGAVL_					0	0	0		nc|ENSG00000154473|O43684-2|BUB3;ENSG00000154473|ENST00000368865|BUB3	nc|ENSG00000154473|O43684-2|BUB3	nc|ENSG00000154473|O43684-2|BUB3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	444.732177734375	2	444.732335	887.450116	1.2769	0.00056789	-1.0626	-0.00047257	0.21433	9.532E-05	444.7316617376571	34.093	0.94286	34.398	34.117	35.06	0.30494					46	22	3	0	0	0	0.83456	1	2522	2522		60.972	8.6728	1	2167200			66837	5279	44434	44453	76073	76073					0.001889426918864956
YQIIAQIN	8	Unmodified	_YQIIAQIN_					0	0	0		ENST00000455586.6_1_X:65242107-65242404:-|nuORF;nc|ENSG00000155659|Q9Y279-3|VSIG4;ENSG00000155659|ENST00000374737|VSIG4	ENST00000455586.6_1_X:65242107-65242404:-|nuORF	ENST00000455586.6_1_X:65242107-65242404:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	481.765380859375	2	481.768917	961.523281	-1.555	-0.00074914	-3.8643	-0.0018617	-5.4192	-0.0026108	481.7668770966029	52.096	0.71196	52.108	51.639	52.351	0.012436					24	16	2	0	0	0	0.87922	1	4517	4517		31.955	2.8053	1	68409			66838	5334	44435	44454	76074	76074					0.040980714145121055
YQIIAQIN	8	Unmodified	_YQIIAQIN_					0	0	0		ENST00000455586.6_1_X:65242107-65242404:-|nuORF;nc|ENSG00000155659|Q9Y279-3|VSIG4;ENSG00000155659|ENST00000374737|VSIG4	ENST00000455586.6_1_X:65242107-65242404:-|nuORF	ENST00000455586.6_1_X:65242107-65242404:-|nuORF	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	481.768917	961.523281	-1.5555	-0.0007494	-4.0873	-0.0019691	-5.6428	-0.0027185	481.76681008838034	52.295	0.77822	52.295	51.831	52.609	0	0.093538	-0.00011534	NaN	31.955	28	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62682			66839	5334	44435	44454							0.040980714145121055
YQKRGRALK	9	Unmodified	_YQKRGRALK_					0	0	0		ENST00000514473.2_1_14:22849590-22849821:-|nuORF	ENST00000514473.2_1_14:22849590-22849821:-|nuORF	ENST00000514473.2_1_14:22849590-22849821:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3430786132812	2	560.340907	1118.66726	1.3844	0.00077572	-2.1968	-0.0012309	-0.81239	-0.00045522	560.3396080868185	114.62	2.2118	114.64	113.84	116.05	0.026466					86	62	2	0	0	0	0.7932	1	12581	12581		18.324	0.95945	1	96310			66840	13067	44436	44455	76075	76075					0.11267337965296065
YQKVVAGVA	9	Unmodified	_YQKVVAGVA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	467.7704162597656	2	467.77146	933.528367	-0.84881	-0.00039705	0.86914	0.00040656	0.020334	9.5118E-06	467.77167769337785	36.635	0.58019	36.582	36.337	36.917	-0.053558					22	12	2	0	0	0	0.74721	1	2450	2450		37.159	5.2042	1	72306			66841	8826	44437	44456	76076	76076					0.05894375277136987
YQKVVAGVA	9	Unmodified	_YQKVVAGVA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	467.77146	933.528367	-0.024245	-1.1341E-05	0.21026	9.8352E-05	0.18601	8.7011E-05	467.7714102593379	36.606	0.4893	36.587	36.376	36.866	-0.018673	0.0027895	-0.0004515	NaN	37.159	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56233			66842	8826	44437	44456							0.05894375277136987
YQKVVAGVANA	11	Unmodified	_YQKVVAGVANA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.3123168945312	2	560.31148	1118.60841	-0.91438	-0.00051234	1.3586	0.00076123	0.4442	0.00024889	560.3118304936621	38.571	0.76883	38.543	38.174	38.943	-0.027843					36	17	3	0	0	0	0.040582	4	2619	2609;2619;2631;2644		104.01	45.232	1	188110			66843	8826	44438	44457	76077;76078;76079;76080	76078					0.053848168803369845
YQKVVAGVANA	11	Unmodified	_YQKVVAGVANA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	560.3121337890625	2	560.31148	1118.60841	-0.76255	-0.00042726	1.8565	0.0010402	1.094	0.00061296	560.3118189812657	38.424	0.70507	38.374	38.117	38.822	-0.050373					37	15	3	0	0	0	0.1837	2	2709	2688;2709		80.455	13.493	1	209740			66844	8826	44438	44457	76081;76082	76082					0.053848168803369845
YQKVVAGVANA	11	Unmodified	_YQKVVAGVANA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	560.3112182617188	2	560.31148	1118.60841	-1.0666	-0.00059765	1.3525	0.00075782	0.28585	0.00016016	560.3118570415677	38.395	0.68195	38.406	38.08	38.762	0.011173					33	15	3	0	0	0	0.11202	2	2631	2619;2631		90.601	30.483	1	212520			66845	8826	44438	44457	76083;76084	76084					0.053848168803369845
YQKVVAGVANA	11	Unmodified	_YQKVVAGVANA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		2	560.31148	1118.60841	-1.3455	-0.00075388	1.7623	0.00098742	0.4168	0.00023354	560.3122464887625	38.381	0.38441	38.381	38.099	38.483	0	-0.034664	0.0012697	NaN	104.01	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33941			66846	8826	44438	44457							0.053848168803369845
YQKVVAGVANA	11	Unmodified	_YQKVVAGVANA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	560.31148	1118.60841	0.27961	0.00015667	-0.12633	-7.0786E-05	0.15327	8.5882E-05	560.3113174452427	38.502	0.55307	38.513	38.263	38.816	0.010708	0.097299	-0.00084673	NaN	104.01	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149560			66847	8826	44438	44457							0.053848168803369845
YQKVVAGVANA	11	Unmodified	_YQKVVAGVANA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	560.31148	1118.60841	0.29856	0.00016729	1.0487	0.00058758	1.3472	0.00075487	560.3115156833388	38.322	0.47225	38.416	38.184	38.656	0.094322	0.00090121	0.00047	NaN	104.01	28	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	168170			66848	8826	44438	44457							0.053848168803369845
YQKVVAGVANA	11	Unmodified	_YQKVVAGVANA_					0	0	0		ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD	ENSG00000244734|ENST00000335295|HBB	ENSG00000244734|ENST00000335295|HBB	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	560.31148	1118.60841	0.2059	0.00011537	-1.3161	-0.00073743	-1.1102	-0.00062206	560.3106925000284	37.78	0.68874	38.303	38.023	38.711	0.52235	-0.11287	-0.00218	NaN	104.01	23	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	153100			66849	8826	44438	44457							0.053848168803369845
YQLLLNKKKRL	11	Unmodified	_YQLLLNKKKRL_					0	0	0			REV__nc|ENSG00000185559|P80370-2|DLK1	REV__nc|ENSG00000185559|P80370-2|DLK1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	472.9708251953125	3	472.973161	1415.89765	-0.99151	-0.00046896	-3.5581	-0.0016829	-4.5496	-0.0021518	472.9714128496593	48.869	1.9906	48.895	48.114	50.105	0.025574					169	50	5	0	0	0	0.7896	2	3799	3717;3799		13.508	4.2961	1	1653800	+		66850	22774	44439	44458	76085;76086	76086					0.20634126507434303
YQLQKKRR	8	Unmodified	_YQLQKKRR_					0	0	0		ENSG00000067334|ENST00000436063|DNTTIP2	ENSG00000067334|ENST00000436063|DNTTIP2	ENSG00000067334|ENST00000436063|DNTTIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.3380737304688	2	560.340907	1118.66726	-1.4185	-0.00079484	0.46581	0.00026101	-0.95269	-0.00053383	560.3410425299326	113.32	6.698	113.27	113.24	119.94	-0.044777					423	158	3	0	0	0	0.86288	1	12861	12861		26.796	3.7536	1	4071000			66851	1182	44440	44459	76087	76087					0.11267337965296065
YQNILRHSIK	10	Unmodified	_YQNILRHSIK_					0	0	0			REV__ENSG00000114771|ENST00000232892|AADAC	REV__ENSG00000114771|ENST00000232892|AADAC	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	424.305419921875	3	424.578811	1270.7146	0.12714	5.3983E-05	0.023568	1.0006E-05	0.15071	6.3989E-05	424.57841702471734	21.644	0.59387	21.015	20.721	21.315	-0.62834					20	14	2	0	0	0	0.37624	1	799	799		18.531	0	1	77357	+		66852	18065	44441	44460	76088	76088					0.09007572445625556
YQPFVYSY	8	Unmodified	_YQPFVYSY_					0	0	0		ENST00000539906.5_2_12:69082787-69085752:+|nuORF	ENST00000539906.5_2_12:69082787-69085752:+|nuORF	ENST00000539906.5_2_12:69082787-69085752:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	533.7448120117188	2	533.74765	1065.48075	0.4371	0.0002333	-3.9717	-0.0021199	-3.5346	-0.0018866	533.7453676378193	50.203	1.6847	50.651	49.446	51.131	0.44761					90	40	3	0	0	0	0.90465	1	4923	4923		40.573	1.3198	1	984120			66853	13485	44442	44461	76089	76089					-0.049373237137160686
YQSNSIQI	8	Unmodified	_YQSNSIQI_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1;ENST00000488459.1_1_X:53560966-53561563:-|nuORF	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	476.742919921875	2	476.740357	951.46616	0.12568	5.9919E-05	4.3539	0.0020757	4.4796	0.0021356	476.7422323018569	78.776	0.58596	78.723	78.44	79.026	-0.053551					30	14	3	0	0	0	0.89494	1	7866	7866		37.159	1.5408	1	138270			66854	1560	44443	44462	76090	76090					-0.011513958618593279
YQVGGQGCWY	10	Unmodified	_YQVGGQGCWY_					0	0	0		ENST00000407418.7_1_22:39259026-39259239:-|nuORF	ENST00000407418.7_1_22:39259026-39259239:-|nuORF	ENST00000407418.7_1_22:39259026-39259239:-|nuORF	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	580.7433471679688	2	580.745116	1159.47568	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.303	1	70.433	69.933	70.933	0.12965								0	0	0	0.45132	1	6388	6388		27.882	3.3631	1				66855	11284	44444	44463	76091	76091					-0.0976795084798141
YRDWNSVIK	9	Unmodified	_YRDWNSVIK_					0	0	0			REV__ENSG00000169857|ENST00000306730|AVEN	REV__ENSG00000169857|ENST00000306730|AVEN	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	590.80859375	2	590.809105	1179.60366	0.75906	0.00044846	-1.2309	-0.00072721	-0.47181	-0.00027875	590.8083889638864	59.878	1.5877	59.846	59.4	60.988	-0.031727					100	43	3	0	0	0	0.18601	1	5661	5661		76.774	0	1	6527800	+		66856	21607	44445	44464	76092	76092					0.021039327375319772
YREKNKELKQR	11	Unmodified	_YREKNKELKQR_					0	0	0			REV__nc|ENSG00000116871|Q3KQU3-2|MAP7D1	REV__nc|ENSG00000116871|Q3KQU3-2|MAP7D1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	498.2854919433594	3	497.951196	1490.83176	-1.8811	-0.00093669	1.7867	0.00088967	-0.094436	-4.7025E-05	497.95200362159926	24.056	0.79183	24.056	23.674	24.466	0					97	33	4	0	0	0	0.74771	1	797	797		22.562	2.5311	1	192870	+		66857	18230	44446	44465	76093	76093					0.1059768559459826
YREKQKIAFT	10	Unmodified	_YREKQKIAFT_					0	0	0		ENSG00000153147|ENST00000283131|SMARCA5	ENSG00000153147|ENST00000283131|SMARCA5	ENSG00000153147|ENST00000283131|SMARCA5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.3622436523438	2	642.358962	1282.70337	2.6974	0.0017327	2.0595	0.0013229	4.7569	0.0030556	642.359695370679	114.18	2.3126	114.16	113.46	115.77	-0.024452					163	86	2	0	0	0	0.86471	1	12694	12694		30.318	1.1477	1	464940			66858	5217	44447	44466	76094	76094					0.0733275035152019
YREKQKIAFT	10	Unmodified	_YREKQKIAFT_					0	0	0		ENSG00000153147|ENST00000283131|SMARCA5	ENSG00000153147|ENST00000283131|SMARCA5	ENSG00000153147|ENST00000283131|SMARCA5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.3643798828125	2	642.358962	1282.70337	1.6044	0.0010306	3.846	0.0024705	5.4504	0.0035011	642.3622346823327	110.04	1.0264	110.16	109.72	110.75	0.1229					129	37	5	0	0	0	0.67571	1	11846	11846		45.972	3.108	1	10986000			66859	5217	44447	44466	76095	76095					0.0733275035152019
YREKQKIAFT	10	Unmodified	_YREKQKIAFT_					0	0	0		ENSG00000153147|ENST00000283131|SMARCA5	ENSG00000153147|ENST00000283131|SMARCA5	ENSG00000153147|ENST00000283131|SMARCA5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	642.36328125	2	642.358962	1282.70337	7.1589	0.0045986	-1.9828	-0.0012737	5.1762	0.003325	642.3583965461547	111.81	0.66489	111.84	111.7	112.36	0.032707					85	24	5	0	0	0	0.80179	1	13567	13567		39.253	0	1	7954900			66860	5217	44447	44466	76096	76096					0.0733275035152019
YRFGKIKKFPN	11	Unmodified	_YRFGKIKKFPN_					0	0	0			REV__nc|ENSG00000170959|M0R2J8-2|DCDC1	REV__nc|ENSG00000170959|M0R2J8-2|DCDC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.60797119140625	3	466.60659	1396.79794	0.76537	0.00035713	2.3273	0.0010859	3.0927	0.0014431	466.60758822103855	100.27	2.2686	100.42	99.189	101.46	0.15073					150	53	4	0	0	0	0.74405	1	10529	10529		23.378	4.1152	1	578170	+		66861	30025	44448	44467	76097	76097					0.11541308893515634
YRFIILITLQ	10	Unmodified	_YRFIILITLQ_					0	0	0			REV__ENSG00000137842|ENST00000260403|TMEM62	REV__ENSG00000137842|ENST00000260403|TMEM62	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.8959350585938	2	640.392273	1278.76999	0.064657	4.1406E-05	0.78103	0.00050016	0.84568	0.00054157	640.3927299544963	53.652	0.88778	53.59	53.086	53.973	-0.062065					49	22	3	0	0	0	0.86763	1	4369	4369		26.693	2.1737	1	245330	+		66862	19417	44449	44468	76098	76098					0.14175985913425393
YRFWKKRII	9	Unmodified	_YRFWKKRII_					0	0	0		ENST00000378249.5_1_10:14977545-14995911:-|nuORF;ENST00000418843.5_2_10:14977491-14987187:-|nuORF;nc|ENSG00000152457|Q96SD1-4|DCLRE1C;ENSG00000152457|ENST00000378278|DCLRE1C	ENST00000378249.5_1_10:14977545-14995911:-|nuORF	ENST00000378249.5_1_10:14977545-14995911:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.6019287109375	3	437.267909	1308.7819	-0.73822	-0.0003228	0.63787	0.00027892	-0.10035	-4.3878E-05	437.26808195307575	51.771	1.9748	51.747	51.154	53.129	-0.02343					181	47	5	0	0	0	0.7932	1	4724	4724		19.104	1.2704	1	3639500			66863	5176	44450	44469	76099	76099					0.13985647447270821
YRFYFYMWKFV	11	Unmodified	_YRFYFYMWKFV_					0	0	0		ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	ENSG00000197106|ENST00000331565|SLC6A17	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.6015625	3	550.603969	1648.79008	1.9719	0.0010857	-3.7476	-0.0020634	-1.7757	-0.0009777	550.6018678609452	26.555	0.58612	26.214	25.918	26.504	-0.34035					35	12	4	0	0	0	0.81021	1	1498	1498		9.2118	3.7989	1	324810			66864	8134	44451	44470	76100	76100					-0.008365864183133453
YRHDIDCQWID	11	Unmodified	_YRHDIDCQWID_					0	0	0		nc|ENSG00000115318|P58215-2|LOXL3;chr2:74536471-74550185|34|14.74|0.69|4.41|-|ENST00000409986|LOXL3,LOXL3;nc|ENSG00000115318|P58215-3|LOXL3;ENSG00000115318|ENST00000264094|LOXL3	nc|ENSG00000115318|P58215-2|LOXL3	nc|ENSG00000115318|P58215-2|LOXL3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	489.2804870605469	3	488.550593	1462.62995	1.0769	0.00052612	3.532	0.0017255	4.6089	0.0022517	488.5521875874466	34.41	0.4551	34.715	34.488	34.943	0.30494					23	10	3	0	0	0	0.17911	1	2576	2576		18.531	12.21	1	144280			66865	352	44452	44471	76101	76101					-0.08286166153288832
YRHDIDCQWID	11	Unmodified	_YRHDIDCQWID_					0	0	0		nc|ENSG00000115318|P58215-2|LOXL3;chr2:74536471-74550185|34|14.74|0.69|4.41|-|ENST00000409986|LOXL3,LOXL3;nc|ENSG00000115318|P58215-3|LOXL3;ENSG00000115318|ENST00000264094|LOXL3	nc|ENSG00000115318|P58215-2|LOXL3	nc|ENSG00000115318|P58215-2|LOXL3	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	488.550593	1462.62995	0.38996	0.00019052	4.1047	0.0020053	4.4946	0.0021959	488.5524946122467	34.421	0.49666	34.632	34.4	34.897	0.21003	-0.041593	0.0002499	NaN	18.531	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90474			66866	352	44452	44471							-0.08286166153288832
YRHSWREFHV	10	Unmodified	_YRHSWREFHV_					0	0	0			REV__ENSG00000129292|ENST00000395386|PHF20L1	REV__ENSG00000129292|ENST00000395386|PHF20L1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	472.900390625	3	472.902177	1415.6847	-0.63394	-0.00029979	-3.3218	-0.0015709	-3.9557	-0.0018707	472.9004983235125	30.677	0.80987	30.667	30.372	31.182	-0.010656					45	20	4	0	0	0	0.85441	1	1619	1619		20.837	1.5745	1	144790	+		66867	18816	44453	44472	76102	76102					-0.006513664997100932
YRIRYYKIYFY	11	Unmodified	_YRIRYYKIYFY_					0	0	0		ENSG00000183690|ENST00000420999|EFHC2	ENSG00000183690|ENST00000420999|EFHC2	ENSG00000183690|ENST00000420999|EFHC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	550.6024780273438	3	549.960921	1646.86093	-0.094489	-5.1965E-05	-1.1996	-0.00065976	-1.2941	-0.00071172	550.2945447105689	19.391	0.36741	18.921	18.745	19.113	-0.46967					12	7	2	0	0	0	0.1838	1	507	507		1.3219	0	1	66381			66868	7550	44454	44473	76103	76103					0.06337829890890134
YRKHCPRTYRD	11	Unmodified	_YRKHCPRTYRD_					0	0	0		ENSG00000118017|ENST00000236709|A4GNT	ENSG00000118017|ENST00000236709|A4GNT	ENSG00000118017|ENST00000236709|A4GNT	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	499.25494384765625	3	498.91761	1493.731	0.24369	0.00012158	4.1968	0.0020939	4.4405	0.0022154	499.2540899161715	40.267	0.54999	40.236	39.889	40.439	-0.030991					19	13	2	0	0	0	0.77205	1	2873	2873		17.167	0.63689	1	123100			66869	3008	44455	44474	76104	76104					0.003883303400925797
YRKLFLEIVS	10	Unmodified	_YRKLFLEIVS_					0	0	0		ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3721313476562	2	634.374081	1266.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.34	1	112.37	111.87	112.87	0.028854								0	0	0	0.45132	1	12280	12280		15.642	1.5047	1				66870	5851	44456	44475	76105	76105					0.11091109016683731
YRKLFLEIVS	10	Unmodified	_YRKLFLEIVS_					0	0	0		ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3768310546875	2	634.374081	1266.73361	0.93378	0.00059237	3.7775	0.0023963	4.7112	0.0029887	634.3763930733919	109.65	0.40929	109.73	109.41	109.82	0.078552					47	20	3	0	0	0	0.86348	1	11776	11776		31.53	7.0106	1	6051800			66871	5851	44456	44475	76106	76106					0.11091109016683731
YRKLFLEIVS	10	Unmodified	_YRKLFLEIVS_					0	0	0		ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	634.3763427734375	2	634.374081	1266.73361	0.93395	0.00059247	3.5502	0.0022522	4.4842	0.0028446	634.3760615979032	111.89	0.64575	111.96	111.47	112.12	0.069542					57	19	4	0	0	0	0.86218	1	12038	12038		32.812	5.7651	1	7169800			66872	5851	44456	44475	76107	76107					0.11091109016683731
YRKLFLEIVS	10	Unmodified	_YRKLFLEIVS_					0	0	0		ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3770141601562	2	634.374081	1266.73361	2.1873	0.0013876	3.021	0.0019164	5.2083	0.003304	634.3754018160284	110.03	1.8975	110.08	109.34	111.24	0.054062					180	75	4	0	0	0	0.85466	1	13374	13374		20.947	0	1	6886400			66873	5851	44456	44475	76108	76108					0.11091109016683731
YRKLFLEIVS	10	Unmodified	_YRKLFLEIVS_					0	0	0		ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	634.3764038085938	2	634.374081	1266.73361	2.2049	0.0013987	2.4799	0.0015732	4.6848	0.0029719	634.375598285312	112.22	1.4492	112.25	112.06	113.51	0.030602					90	61	2	0	0	0	0.64457	2	13574	13574;13591		47.657	8.9037	1	7800800			66874	5851	44456	44475	76109;76110	76109					0.11091109016683731
YRKLFLEIVS	10	Unmodified	_YRKLFLEIVS_					0	0	0		ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	ENSG00000163686|ENST00000478253|ABHD6	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	634.8779296875	2	634.374081	1266.73361	6.8506	0.0043458	-2.4939	-0.001582	4.3567	0.0027638	634.3723115389404	111.82	0.6669	111.85	111.67	112.34	0.032715					57	24	4	0	0	0	0.85251	1	13591	13591		19.997	5.1319	1	3829000			66875	5851	44456	44475	76111	76111					0.11091109016683731
YRKMRLRYPVT	11	Unmodified	_YRKMRLRYPVT_					0	0	0		ENSG00000197943|ENST00000564138|PLCG2;ENST00000567980.5_1_16:81819579-81955027:+|nuORF	ENSG00000197943|ENST00000564138|PLCG2	ENSG00000197943|ENST00000564138|PLCG2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	494.3007507324219	3	494.950251	1481.82892	2.2874	0.0011322	-4.2195	-0.0020884	-1.932	-0.00095626	495.2821575063648	97.391	0.12468	97.335	97.23	97.354	-0.055542					4	2	2	0	0	0	0.18159	1	10474	10474		8.4073	2.0864	1	55079			66876	8216	44457	44476	76112	76112					0.10728138936087817
YRKNISILKRH	11	Unmodified	_YRKNISILKRH_					0	0	0			REV__ENSG00000100350|ENST00000397224|FOXRED2	REV__ENSG00000100350|ENST00000397224|FOXRED2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	476.6240234375	3	476.624643	1426.8521	-1.6911	-0.000806	-0.27823	-0.00013261	-1.9693	-0.00093861	476.6244663192156	113.32	6.698	113.27	113.24	119.94	-0.044777					315	158	2	0	0	0	0.79224	1	12945	12945		12.957	0	1	2577100	+		66877	17178	44458	44477	76113	76113					0.15574901045056322
YRKPKFVVK	9	Unmodified	_YRKPKFVVK_					0	0	0			REV__ENSG00000116199|ENST00000263733|FAM20B	REV__ENSG00000116199|ENST00000263733|FAM20B	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	582.8681030273438	2	582.866226	1163.7179	3.1889	0.0018587	0.97603	0.00056889	4.1649	0.0024276	582.8668381278478	102.4	0.90347	102.35	101.97	102.87	-0.047005					54	21	4	0	0	0	0.7932	1	11155	11155		16.473	1.6083	1	278730	+		66878	18189	44459	44478	76114	76114					0.1425886729030026
YRKVLVLDVF	10	Unmodified	_YRKVLVLDVF_					0	0	0			REV__ENSG00000172345|ENST00000302824|STARD5	REV__ENSG00000172345|ENST00000302824|STARD5	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	626.3900146484375	2	626.376623	1250.73869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.11	1	111.09	110.59	111.59	-0.026314								0	0	0	0.45132	1	12301	12301		26.693	4.1133	1		+		66879	21821	44460	44479	76115	76115					0.12335412879292562
YRKVLVLDVF	10	Unmodified	_YRKVLVLDVF_					0	0	0			REV__ENSG00000172345|ENST00000302824|STARD5	REV__ENSG00000172345|ENST00000302824|STARD5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	626.3793334960938	2	626.376623	1250.73869	2.0982	0.0013142	2.7522	0.0017239	4.8504	0.0030381	626.3782628803294	105.51	2.7267	105.67	104.93	107.65	0.15583					187	94	2	0	0	0	0.86718	1	12836	12836		27.882	1.1893	1	2939000	+		66880	21821	44460	44479	76116	76116					0.12335412879292562
YRKYALYKIYI	11	Unmodified	_YRKYALYKIYI_					0	0	0			REV__ENST00000280258.5_1_11:86519997-86520249:+|nuORF	REV__ENST00000280258.5_1_11:86519997-86520249:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.6228332519531	3	498.622017	1492.84422	0.21444	0.00010693	1.9975	0.000996	2.2119	0.0011029	498.62281482057665	22.043	1.7711	21.6	20.78	22.551	-0.44324					90	40	3	0	0	0	0.69071	1	821	821		33.039	1.0053	1	200640	+		66881	24603	44461	44480	76117	76117					0.11751329004960098
YRLIRGAWRRF	11	Unmodified	_YRLIRGAWRRF_					0	0	0			REV__ENST00000598038.5_1_19:17447996-17448320:+|nuORF	REV__ENST00000598038.5_1_19:17447996-17448320:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	498.6231689453125	3	498.624866	1492.85277	-0.24645	-0.00012288	-3.3042	-0.0016476	-3.5507	-0.0017705	498.62308144457916	21.663	1.0696	21.599	21.115	22.184	-0.064743					82	38	3	0	0	0	0.74771	1	635	635		22.562	0.78116	1	61443	+		66882	29276	44462	44481	76118	76118					0.12605740484741546
YRLRYRRFCYW	11	Unmodified	_YRLRYRRFCYW_					0	0	0			REV__ENST00000593099.5_1_17:33325156-33325826:+|nuORF	REV__ENST00000593099.5_1_17:33325156-33325826:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3118896484375	3	561.289266	1680.84597	0.19324	0.00010846	2.5659	0.0014402	2.7592	0.0015487	561.2902844252799	58.582	0.16723	59.136	59.047	59.215	0.55323					5	3	2	0	0	0	0.1842	1	6156	6156		0.37141	0	1	63342	+		66883	29224	44463	44482	76119	76119					0.032780595418898884
YRMKTLIEK	9	Unmodified	_YRMKTLIEK_					0	0	0			REV__ENSG00000100209|ENST00000216027|HSCB	REV__ENSG00000100209|ENST00000216027|HSCB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	591.3316650390625	2	591.339184	1180.66381	-1.3918	-0.00082303	-1.3358	-0.0007899	-2.7276	-0.0016129	591.3383093897371	79.318	0.9941	79.372	78.856	79.85	0.053841					66	30	3	0	0	0	0.73802	1	7831	7831		37.812	2.1932	1	329750	+		66884	17153	44464	44483	76120	76120					0.080709070764442
YRNLKRKLKFL	11	Unmodified	_YRNLKRKLKFL_					0	0	0		ENSG00000169592|ENST00000563197|INO80E;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;ENST00000563040.5_1_16:30007580-30010601:+|nuORF;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;nc|ENSG00000169592|Q8NBZ0-2|INO80E	ENSG00000169592|ENST00000563197|INO80E	ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.6500244140625	3	493.648789	1477.92454	-0.69439	-0.00034278	2.5038	0.001236	1.8095	0.00089323	493.64986615428916	44.451	1.6231	44.46	43.725	45.348	0.0084534					108	38	3	0	0	0	0.80813	1	3184	3184		9.6461	0	1	353910			66885	6507	44465	44484	76121	76121					0.2046923511861678
YRNLKRKLKFL	11	Unmodified	_YRNLKRKLKFL_					0	0	0		ENSG00000169592|ENST00000563197|INO80E;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;ENST00000563040.5_1_16:30007580-30010601:+|nuORF;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;nc|ENSG00000169592|Q8NBZ0-2|INO80E	ENSG00000169592|ENST00000563197|INO80E	ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	493.6486511230469	3	493.648789	1477.92454	-0.69215	-0.00034168	2.8519	0.0014078	2.1597	0.0010662	493.65006449160734	45.544	1.1393	45.556	45.28	46.419	0.012058					68	31	3	0	0	0	0.7896	1	3296	3296		13.508	3.8618	1	171990			66886	6507	44465	44484	76122	76122					0.2046923511861678
YRNLKRKLKFL	11	Unmodified	_YRNLKRKLKFL_					0	0	0		ENSG00000169592|ENST00000563197|INO80E;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;ENST00000563040.5_1_16:30007580-30010601:+|nuORF;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;nc|ENSG00000169592|Q8NBZ0-2|INO80E	ENSG00000169592|ENST00000563197|INO80E	ENSG00000169592|ENST00000563197|INO80E	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	493.649658203125	3	493.648789	1477.92454	0.28936	0.00014284	1.4809	0.00073102	1.7702	0.00087386	493.6493656295497	44.418	1.6555	44.467	43.631	45.286	0.048996					106	39	4	0	0	0	0.81021	1	3177	3177		9.2118	2.5522	1	509790			66887	6507	44465	44484	76123	76123					0.2046923511861678
YRNLKRKLKFL	11	Unmodified	_YRNLKRKLKFL_					0	0	0		ENSG00000169592|ENST00000563197|INO80E;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;ENST00000563040.5_1_16:30007580-30010601:+|nuORF;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;nc|ENSG00000169592|Q8NBZ0-2|INO80E	ENSG00000169592|ENST00000563197|INO80E	ENSG00000169592|ENST00000563197|INO80E	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	493.648789	1477.92454	-1.5834	-0.00078166	3.7705	0.0018613	2.1871	0.0010797	493.9850243183884	45.906	1.4087	45.906	45.336	46.744	0	0.29817	0.0012257	NaN	13.508	75	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178930			66888	6507	44465	44484							0.2046923511861678
YRNLKRKLKFL	11	Unmodified	_YRNLKRKLKFL_					0	0	0		ENSG00000169592|ENST00000563197|INO80E;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;ENST00000563040.5_1_16:30007580-30010601:+|nuORF;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;nc|ENSG00000169592|Q8NBZ0-2|INO80E	ENSG00000169592|ENST00000563197|INO80E	ENSG00000169592|ENST00000563197|INO80E	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	493.648789	1477.92454	-1.2863	-0.00063497	2.7811	0.0013729	1.4949	0.00073794	493.6500528883677	44.577	0.80532	45.422	44.986	45.791	0.84438	-0.18644	-0.00023951	NaN	13.508	61	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	978680			66889	6507	44465	44484							0.2046923511861678
YRPNVIKLM	9	Unmodified	_YRPNVIKLM_					0	0	0			REV__ENSG00000188408|ENST00000602297|MAGEB5	REV__ENSG00000188408|ENST00000602297|MAGEB5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	567.3302001953125	2	567.328619	1132.64269	-0.50942	-0.00028901	3.899	0.002212	3.3896	0.001923	567.330671348017	90.296	3.1057	90.767	88.836	91.942	0.47068					211	77	5	0	0	0	0.7932	1	10739	10739		25.45	3.4903	1	5685000	+		66890	23001	44466	44485	76124	76124					0.08166941767558455
YRQHRRKSK	9	Unmodified	_YRQHRRKSK_					0	0	0			REV__nc|ENSG00000184672|Q86SE5-2|RALYL	REV__nc|ENSG00000184672|Q86SE5-2|RALYL	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.24365234375	3	420.246167	1257.71667	0.24076	0.00010118	2.6351	0.0011074	2.8758	0.0012085	420.24726060491884	46.048	0.47566	46.091	45.855	46.33	0.042595					17	13	2	0	0	0	0.70638	1	3356	3356		40.058	6.5166	1	89428	+		66891	30096	44467	44486	76125	76125					0.09812045974126704
YRQHRRKSK	9	Unmodified	_YRQHRRKSK_					0	0	0			REV__nc|ENSG00000184672|Q86SE5-2|RALYL	REV__nc|ENSG00000184672|Q86SE5-2|RALYL	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	420.246167	1257.71667	0.24076	0.00010118	2.6351	0.0011074	2.8758	0.0012085	420.24726060491884	46.048	0.47566	46.091	45.855	46.33	0.042595	0.022051	-0.0010179	NaN	40.058	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89428	+		66892	30096	44467	44486							0.09812045974126704
YRQLLGAFLL	10	Unmodified	_YRQLLGAFLL_					0	0	0			REV__ENSG00000073067|ENST00000308919|CYP2W1	REV__ENSG00000073067|ENST00000308919|CYP2W1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.3564453125	2	597.355691	1192.69683	-0.84393	-0.00050413	1.3726	0.00081991	0.52864	0.00031578	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.86201	1	11143	11143		24.203	1.1603	1	1407500	+		66893	16665	44468	44487	76126	76126					0.10818857190793096
YRRITYHNWRH	11	Unmodified	_YRRITYHNWRH_					0	0	0		nc|ENSG00000133256|P35913-3|PDE6B;nc|ENSG00000133256|P35913-2|PDE6B;ENSG00000133256|ENST00000496514|PDE6B	nc|ENSG00000133256|P35913-3|PDE6B	nc|ENSG00000133256|P35913-3|PDE6B	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	534.6097412109375	3	534.611397	1600.81236	0.68886	0.00036827	-4.2696	-0.0022826	-3.5807	-0.0019143	534.6090878240581	26.435	0.77231	26.463	26.091	26.863	0.028172					87	34	4	0	0	0	0.8498	1	1012	1012		6.001	0.30226	1	363120			66894	3869	44469	44488	76127	76127					0.035987740943483004
YRRKLEGRELL	11	Unmodified	_YRRKLEGRELL_					0	0	0			REV__nc|ENSG00000136824|O95347-2|SMC2	REV__nc|ENSG00000136824|O95347-2|SMC2	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	478.30487060546875	3	478.284287	1431.83103	1.1166	0.00053405	-1.9	-0.00090873	-0.78338	-0.00037468	478.28312036659764	17.483	0.26408	17.001	16.851	17.115	-0.48256					8	5	3	0	0	0	0.18258	1	269	269		12.957	4.1582	1	47716	+		66895	19337	44470	44489	76128	76128					0.13238890945535786
YRRLVRLE	8	Unmodified	_YRRLVRLE_					0	0	0			REV__ENSG00000177971|ENST00000403490|IMP3	REV__ENSG00000177971|ENST00000403490|IMP3	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	552.831787109375	2	552.835457	1103.65636	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.715	1	83.782	83.282	84.282	0.066719								0	0	0	0.30045	1	8329	8329		40.573	1.3198	1		+		66896	22242	44471	44490	76129	76129					0.10867935591022615
YRRRRSMR	8	Unmodified	_YRRRRSMR_					0	0	0			REV__nc|ENSG00000176473|Q64LD2-2|WDR25	REV__nc|ENSG00000176473|Q64LD2-2|WDR25	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	590.8612670898438	2	590.833257	1179.65196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.028	1	15.541	15.041	16.041	-0.48718								0	0	0	0.3037	1	78	78		18.324	0.062328	1		+		66897	22129	44472	44491	76130	76130					0.0693214789648664
YRRRVVYMRWY	11	Unmodified	_YRRRVVYMRWY_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.6022338867188	3	549.96115	1646.86162	-0.00074004	-4.07E-07	-1.6569	-0.00091125	-1.6577	-0.00091165	549.960371286745	19.584	0.32092	18.954	18.801	19.122	-0.6296					11	6	2	0	0	0	0.18318	1	528	528		9.6461	3.3253	1	55282	+		66898	23243	44473	44492	76131	76131					0.06406346058929557
YRRVLRMYDDR	11	Unmodified	_YRRVLRMYDDR_					0	0	0		nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1;nc|ENSG00000135164|Q9Y222-4|DMTF1;nc|ENSG00000135164|Q9Y222-2|DMTF1;nc|ENSG00000135164|Q9Y222-3|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	nc|ENSG00000135164|Q9Y222-5|DMTF1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7626953125	3	514.936781	1541.78851	0.7123	0.00036679	-0.64753	-0.00033344	0.064771	3.3353E-05	515.269798986292	53.789	1.3814	54.203	53.786	55.167	0.4139					39	32	2	0	0	0	0.17586	1	5461	5461		11.932	2.2862	1	240530			66899	3990	44474	44493	76132	76132					0.03929172545667825
YRRWRQWLGRL	11	Unmodified	_YRRWRQWLGRL_					0	0	0			REV__nc|ENSG00000155542|Q8NE22-2|SETD9	REV__nc|ENSG00000155542|Q8NE22-2|SETD9	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	530.9702758789062	3	530.635654	1588.88513	0.22671	0.0001203	-3.986	-0.0021151	-3.7593	-0.0019948	530.6335626505213	39.05	0.59222	38.997	38.674	39.266	-0.052727					43	17	3	0	0	0	0.77205	1	2347	2347		17.167	7.5206	1	338380	+		66900	20432	44475	44494	76133	76133					0.1142452788776609
YRRYRIWKRRR	11	Unmodified	_YRRYRIWKRRR_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	569.8085327148438	3	570.341352	1708.00223	-0.75312	-0.00042953	-0.74923	-0.00042732	-1.5024	-0.00085685	570.6750400862225	28.737	2.306	28.708	27.6	29.906	-0.029207					80	53	2	0	0	0	0.18331	1	1797	1797		9.2118	8.8404	1	127590	+		66901	23556	44476	44495	76134	76134					0.1765468582734684
YRRYRIWKRRR	11	Unmodified	_YRRYRIWKRRR_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MATCH	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1		3	570.341352	1708.00223	-1.4302	-0.00081572	0.005557	3.1694E-06	-1.4247	-0.00081255	570.6754866866171	28.877	0.33865	28.877	28.679	29.018	0	0.11846	0.0019169	NaN	9.2118	19	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50378	+		66902	23556	44476	44495							0.1765468582734684
YRRYRIWKRRR	11	Unmodified	_YRRYRIWKRRR_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		3	570.341352	1708.00223	0.22128	0.0001262	-2.7267	-0.0015552	-2.5054	-0.001429	570.3397057581197	28.59	0.6939	28.702	28.537	29.231	0.11225	-0.056562	-0.0027581	NaN	9.2118	51	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	202880	+		66903	23556	44476	44495							0.1765468582734684
YRRYRIWKRRR	11	Unmodified	_YRRYRIWKRRR_					0	0	0			REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	REV__nc|ENSG00000205356|Q7Z6L1-3|TECPR1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		3	570.341352	1708.00223	0.72008	0.00041069	-3.0875	-0.0017609	-2.3674	-0.0013502	570.6740394298604	28.727	0.42917	28.748	28.627	29.057	0.021948	-0.010475	-0.0033754	NaN	9.2118	26	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	203040	+		66904	23556	44476	44495							0.1765468582734684
YRSLILRFV	9	Unmodified	_YRSLILRFV_					0	0	0		nc|ENSG00000121988|Q5FWF4-3|ZRANB3;ENSG00000121988|ENST00000264159|ZRANB3;nc|ENSG00000121988|Q5FWF4-4|ZRANB3;nc|ENSG00000121988|Q5FWF4-2|ZRANB3;ENST00000403017.2_1_2:135957914-136028945:-|nuORF	nc|ENSG00000121988|Q5FWF4-3|ZRANB3	nc|ENSG00000121988|Q5FWF4-3|ZRANB3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	583.857666015625	2	583.855858	1165.69716	2.8156	0.0016439	2.3715	0.0013846	5.1872	0.0030286	583.8570467437777	98.7	2.5935	98.645	98.156	100.75	-0.054817					154	59	5	0	0	0	0.7932	1	10729	10729		24.203	2.2429	1	1920100			66905	3204	44477	44496	76135	76135					0.1209427691064775
YRSRRRYSWRR	11	Unmodified	_YRSRRRYSWRR_					0	0	0		ENST00000491215.1_1_6:32163881-32163974:-|nuORF	ENST00000491215.1_1_6:32163881-32163974:-|nuORF	ENST00000491215.1_1_6:32163881-32163974:-|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.9752807617188	3	547.969696	1640.88726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.3	1	110.37	109.87	110.87	0.068001								0	0	0	0.56276	1	13392	13392		5.1424	1.7337	1				66906	12678	44478	44497	76136	76136					0.09244956625593659
YRSSNLQY	8	Unmodified	_YRSSNLQY_					0	0	0		nc|ENSG00000127946|O00291-3|HIP1;nc|ENSG00000127946|O00291-4|HIP1;ENSG00000127946|ENST00000336926|HIP1	nc|ENSG00000127946|O00291-3|HIP1	nc|ENSG00000127946|O00291-3|HIP1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	516.3111572265625	2	515.751256	1029.48796	1.0223	0.00052727	-0.36159	-0.00018649	0.66076	0.00034079	515.7504188834886	33.017	0.63121	33.229	32.851	33.482	0.21168					26	14	3	0	0	0	0.4196	1	2315	2315		53.351	16.905	1	161020			66907	3518	44479	44498	76137	76137					-0.02560591113274313
YRVRKFLALLR	11	Unmodified	_YRVRKFLALLR_					0	0	0		nc|ENSG00000073969|P46459-2|NSF;ENSG00000073969|ENST00000398238|NSF	nc|ENSG00000073969|P46459-2|NSF	nc|ENSG00000073969|P46459-2|NSF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	478.9728088378906	3	478.973384	1433.89832	-1.6788	-0.00080411	3.2689	0.0015657	1.5901	0.0007616	479.3090926937771	44.658	1.9564	44.658	43.823	45.779	0					118	47	4	0	0	0	0.76579	1	3311	3311		18.531	6.0982	1	394570			66908	1303	44480	44499	76138	76138					0.19872965947160992
YRVRKFLALLR	11	Unmodified	_YRVRKFLALLR_					0	0	0		nc|ENSG00000073969|P46459-2|NSF;ENSG00000073969|ENST00000398238|NSF	nc|ENSG00000073969|P46459-2|NSF	nc|ENSG00000073969|P46459-2|NSF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	478.97418212890625	3	478.973384	1433.89832	-0.79395	-0.00038028	3.0915	0.0014807	2.2975	0.0011005	478.9747699681175	46.852	2.0236	46.823	45.583	47.607	-0.028782					130	52	3	0	0	0	0.81219	1	3892	3892		8.7993	0	1	237090			66909	1303	44480	44499	76139	76139					0.19872965947160992
YRVRKFLALLR	11	Unmodified	_YRVRKFLALLR_					0	0	0		nc|ENSG00000073969|P46459-2|NSF;ENSG00000073969|ENST00000398238|NSF	nc|ENSG00000073969|P46459-2|NSF	nc|ENSG00000073969|P46459-2|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	478.9737243652344	3	478.973384	1433.89832	0.35245	0.00016881	1.7746	0.00084999	2.127	0.0010188	478.9741095971511	52.816	1.6716	52.886	52.36	54.032	0.070713					123	47	3	0	0	0	0.81219	1	4367	4367		8.7993	3.3864	1	295530			66910	1303	44480	44499	76140	76140					0.19872965947160992
YRVRKFLALLR	11	Unmodified	_YRVRKFLALLR_					0	0	0		nc|ENSG00000073969|P46459-2|NSF;ENSG00000073969|ENST00000398238|NSF	nc|ENSG00000073969|P46459-2|NSF	nc|ENSG00000073969|P46459-2|NSF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	479.30853271484375	3	478.973384	1433.89832	-0.41434	-0.00019846	3.0207	0.0014469	2.6064	0.0012484	478.9747956624805	52.366	3.0274	52.291	51.239	54.266	-0.074512					153	87	3	0	0	0	0.81021	1	4350	4350		9.2118	0.41249	1	341610			66911	1303	44480	44499	76141	76141					0.19872965947160992
YSANLVKH	8	Unmodified	_YSANLVKH_					0	0	0		ENST00000527740.1_1_8:145998653-146003561:-|nuORF;ENSG00000196378|ENST00000429371|ZNF34;nc|ENSG00000196378|Q8IZ26|ZNF34	ENST00000527740.1_1_8:145998653-146003561:-|nuORF	ENST00000527740.1_1_8:145998653-146003561:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	466.2544250488281	2	466.253434	930.492316	0.40858	0.0001905	0.44177	0.00020598	0.85035	0.00039648	466.2535455662522	60.895	1.1821	61.014	60.015	61.197	0.11901					69	45	2	0	0	0	0.87064	1	5253	5253		29.15	3.6994	1	266480			66912	8048	44481	44500	76142	76142					0.024289181002814075
YSCPREEEG	9	Unmodified	_YSCPREEEG_					0	0	0		ENST00000541233.1_1_12:6554564-6560555:+|nuORF;ENSG00000139193|ENST00000266557|CD27	ENST00000541233.1_1_12:6554564-6560555:+|nuORF	ENST00000541233.1_1_12:6554564-6560555:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	535.2132568359375	2	535.216388	1068.41822	0.19581	0.0001048	-3.1416	-0.0016814	-2.9458	-0.0015766	535.214504745302	29.619	0.4264	29.731	29.551	29.977	0.11225					45	20	3	0	0	0	0.58668	1	1283	1283		47.657	8.4045	1	133080			66913	4353	44482	44501	76143	76143					-0.11324837844199465
YSDAFLNDSY	10	Unmodified	_YSDAFLNDSY_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;nc|ENSG00000118007|Q8WVM7-2|STAG1;ENSG00000118007|ENST00000383202|STAG1	ENSG00000101972|ENST00000371145|STAG2;ENSG00000118007|ENST00000383202|STAG1	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.7520141601562	2	597.751118	1193.48768	-1.585	-0.00094745	2.8016	0.0016746	1.2165	0.00072718	597.7522098090731	71.5	0.43304	71.541	71.367	71.8	0.040222					29	17	2	0	0	0	0.86446	1	6853	6853		30.569	0.065224	1	109930			66914	1975;3007	44483	44502	76144	76144					-0.10132055623807901
YSDDIPHAL	9	Unmodified	_YSDDIPHAL_					0	0	0		ENST00000518442.5_1_8:109247181-109261015:-|nuORF;ENSG00000104408|ENST00000220849|EIF3E;chr8:108241913-108268246|54|11.59|0.63|4.21|-|ENST00000678797|EIF3E,EIF3E	ENST00000518442.5_1_8:109247181-109261015:-|nuORF	ENST00000518442.5_1_8:109247181-109261015:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	515.7451782226562	2	515.745639	1029.47673	0.21696	0.00011189	-0.64643	-0.00033339	-0.42947	-0.0002215	515.745239628854	52.697	0.74281	53.12	52.848	53.591	0.42348					39	17	3	0	0	0	5.6247E-14	2	5287	5287;5299		173.85	72.637	1	1490200			66915	509	44484	44503	76145;76146	76145					-0.036834132074318404
YSDDIPHAL	9	Unmodified	_YSDDIPHAL_					0	0	0		ENST00000518442.5_1_8:109247181-109261015:-|nuORF;ENSG00000104408|ENST00000220849|EIF3E;chr8:108241913-108268246|54|11.59|0.63|4.21|-|ENST00000678797|EIF3E,EIF3E	ENST00000518442.5_1_8:109247181-109261015:-|nuORF	ENST00000518442.5_1_8:109247181-109261015:-|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	515.745639	1029.47673	0.10859	5.6004E-05	-0.5218	-0.00026912	-0.41321	-0.00021311	515.7453071944999	52.507	0.7029	53.141	52.848	53.551	0.63428	0.010336	7.5362E-05	NaN	173.85	36	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1528600			66916	509	44484	44503							-0.036834132074318404
YSDHPSGGSY	10	Unmodified	_YSDHPSGGSY_					0	0	0		nc|ENSG00000147274|P38159-2|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;ENSG00000147274|ENST00000320676|RBMX	nc|ENSG00000147274|P38159-2|RBMX	nc|ENSG00000147274|P38159-2|RBMX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	535.2142333984375	2	535.214703	1068.41485	0.30675	0.00016418	-0.37687	-0.00020171	-0.070121	-3.753E-05	535.2144134101483	29.908	0.60449	29.933	29.652	30.256	0.025013					26	15	2	0	0	0	0.28217	2	1505	1505;1515		74.255	15.473	1	146760			66917	4895	44485	44504	76147;76148	76147					-0.11661764626546756
YSDHPSGGSY	10	Unmodified	_YSDHPSGGSY_					0	0	0		nc|ENSG00000147274|P38159-2|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;ENSG00000147274|ENST00000320676|RBMX	nc|ENSG00000147274|P38159-2|RBMX	nc|ENSG00000147274|P38159-2|RBMX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	535.2144165039062	2	535.214703	1068.41485	0.41733	0.00022336	-0.405	-0.00021676	0.012329	6.5984E-06	535.2143253657756	29.953	0.64371	29.91	29.634	30.278	-0.043093					29	13	3	0	0	0	0.21786	2	1600	1600;1611		82.241	27.476	1	147780			66918	4895	44485	44504	76149;76150	76149					-0.11661764626546756
YSDHPSGGSY	10	Unmodified	_YSDHPSGGSY_					0	0	0		nc|ENSG00000147274|P38159-2|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;ENSG00000147274|ENST00000320676|RBMX	nc|ENSG00000147274|P38159-2|RBMX	nc|ENSG00000147274|P38159-2|RBMX	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	535.2145385742188	2	535.214703	1068.41485	0.79725	0.0004267	-0.77309	-0.00041377	0.024158	1.293E-05	535.2141164546551	29.978	0.53096	29.963	29.709	30.24	-0.015167					28	11	3	0	0	0	0.30722	2	1542	1542;1555		71.877	25.111	1	146230			66919	4895	44485	44504	76151;76152	76151					-0.11661764626546756
YSDHPSGGSY	10	Unmodified	_YSDHPSGGSY_					0	0	0		nc|ENSG00000147274|P38159-2|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;ENSG00000147274|ENST00000320676|RBMX	nc|ENSG00000147274|P38159-2|RBMX	nc|ENSG00000147274|P38159-2|RBMX	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	535.214703	1068.41485	-0.10625	-5.6867E-05	0.36714	0.0001965	0.26089	0.00013963	535.2146843860054	29.982	0.42194	30.048	29.846	30.268	0.066727	0.14403	0.0008171	NaN	82.241	36	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129340			66920	4895	44485	44504							-0.11661764626546756
YSDHPSGGSY	10	Unmodified	_YSDHPSGGSY_					0	0	0		nc|ENSG00000147274|P38159-2|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;ENSG00000147274|ENST00000320676|RBMX	nc|ENSG00000147274|P38159-2|RBMX	nc|ENSG00000147274|P38159-2|RBMX	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	535.214703	1068.41485	0.56935	0.00030472	-0.57645	-0.00030852	-0.0071039	-3.8021E-06	535.214333902218	29.829	0.41904	29.841	29.625	30.044	0.011229	-0.063731	-0.00019295	NaN	82.241	35	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156490			66921	4895	44485	44504							-0.11661764626546756
YSDKYGLGY	9	Unmodified	_YSDKYGLGY_					0	0	0		ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENSG00000166851|ENST00000300093|PLK1;ENST00000564794.1_1_16:23700038-23701081:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	533.2473754882812	2	533.248015	1064.48148	-0.099837	-5.3238E-05	0.146	7.7857E-05	0.046168	2.4619E-05	533.247993551336	49.929	0.65734	49.958	49.561	50.218	0.029629					27	16	2	0	0	0	0.17181	2	3885	3885;3896		79.713	30.271	1	240120			66922	13846	44486	44505	76153;76154	76153					-0.0481852906466429
YSDKYGLGY	9	Unmodified	_YSDKYGLGY_					0	0	0		ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENSG00000166851|ENST00000300093|PLK1;ENST00000564794.1_1_16:23700038-23701081:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	533.2484741210938	2	533.248015	1064.48148	0.37723	0.00020116	-0.29311	-0.0001563	0.084124	4.4859E-05	533.2478913412277	49.987	0.94949	50.029	49.555	50.505	0.042236					39	24	2	0	0	0	0.065196	2	3896	3896;3906		101.6	43.789	1	342340			66923	13846	44486	44505	76155;76156	76155					-0.0481852906466429
YSDKYGLGY	9	Unmodified	_YSDKYGLGY_					0	0	0		ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENSG00000166851|ENST00000300093|PLK1;ENST00000564794.1_1_16:23700038-23701081:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	533.2484130859375	2	533.248015	1064.48148	-0.15373	-8.1978E-05	0.28264	0.00015072	0.12891	6.8739E-05	533.2481356414633	49.93	0.95125	49.837	49.424	50.376	-0.092693					36	23	3	0	0	0	0.44421	2	3907	3895;3907		54.776	12.302	1	236930			66924	13846	44486	44505	76157;76158	76158					-0.0481852906466429
YSDKYGLGY	9	Unmodified	_YSDKYGLGY_					0	0	0		ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENSG00000166851|ENST00000300093|PLK1;ENST00000564794.1_1_16:23700038-23701081:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	533.248015	1064.48148	0.11208	5.9769E-05	0.026937	1.4364E-05	0.13902	7.4133E-05	533.2477888410625	49.826	0.61312	49.823	49.491	50.105	-0.0030327	-0.080055	-9.7872E-05	NaN	101.6	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92224			66925	13846	44486	44505							-0.0481852906466429
YSDKYGLGY	9	Unmodified	_YSDKYGLGY_					0	0	0		ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENSG00000166851|ENST00000300093|PLK1;ENST00000564794.1_1_16:23700038-23701081:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	ENST00000562272.5_1_16:23691188-23701381:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	533.248015	1064.48148	0.36247	0.00019329	0.016303	8.6937E-06	0.37878	0.00020198	533.247807599445	49.862	0.48779	49.866	49.633	50.121	0.0035973	-0.036888	-0.00010921	NaN	101.6	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74195			66926	13846	44486	44505							-0.0481852906466429
YSDRSSGGSY	10	Unmodified	_YSDRSSGGSY_					0	0	0		ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;ENST00000591097.5_1_19:1271671-1272439:+|nuORF;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP;ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.7255859375	2	539.725435	1077.43632	0.57792	0.00031192	-0.68408	-0.00036921	-0.10616	-5.7296E-05	539.7249558516484	24.279	0.58073	24.335	24.088	24.669	0.055487					22	14	2	0	0	0	0.31985	1	868	868		70.816	1.1886	1	86496			66927	1763	44487	44506	76159	76159					-0.09930379597835781
YSDRSSGGSY	10	Unmodified	_YSDRSSGGSY_					0	0	0		ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;ENST00000591097.5_1_19:1271671-1272439:+|nuORF;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP;ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	539.7255249023438	2	539.725435	1077.43632	0.51126	0.00027594	-0.34503	-0.00018622	0.16623	8.9719E-05	539.7251084666202	24.772	0.68965	24.726	24.458	25.147	-0.04598					31	15	3	0	0	0	0.26675	1	990	990		76.17	4.7918	1	97663			66928	1763	44487	44506	76160	76160					-0.09930379597835781
YSDRSSGGSY	10	Unmodified	_YSDRSSGGSY_					0	0	0		ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;ENST00000591097.5_1_19:1271671-1272439:+|nuORF;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP;ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.7244873046875	2	539.725435	1077.43632	0.8846	0.00047744	-0.84103	-0.00045393	0.04357	2.3516E-05	539.7249405269661	24.84	0.53406	24.803	24.492	25.026	-0.037176					25	11	3	0	0	0	0.26675	2	926	920;926		76.17	30.197	1	73700			66929	1763	44487	44506	76161;76162	76162					-0.09930379597835781
YSDRSSGGSY	10	Unmodified	_YSDRSSGGSY_					0	0	0		ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;ENST00000591097.5_1_19:1271671-1272439:+|nuORF;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP;ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.724853515625	2	539.725435	1077.43632	-0.050215	-2.7102E-05	-0.007128	-3.8472E-06	-0.057343	-3.0949E-05	539.7253759599041	24.744	0.53775	24.802	24.496	25.034	0.058167					42	24	2	0	0	0	0.28289	2	873	873;881		74.165	20.814	1	165940			66930	1763	44487	44506	76163;76164	76163					-0.09930379597835781
YSDRSSGGSY	10	Unmodified	_YSDRSSGGSY_					0	0	0		ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;ENST00000591097.5_1_19:1271671-1272439:+|nuORF;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP;ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	539.7256469726562	2	539.725435	1077.43632	0.77382	0.00041765	-0.42374	-0.0002287	0.35008	0.00018895	539.7249384476173	24.497	0.43955	24.511	24.296	24.736	0.013996					41	20	3	0	0	0	0.18075	1	842	842		90.601	18.723	1	147930			66931	1763	44487	44506	76165	76165					-0.09930379597835781
YSEEDESEPL	10	Unmodified	_YSEEDESEPL_					0	0	0			REV__ENSG00000100906|ENST00000216797|NFKBIA	REV__ENSG00000100906|ENST00000216797|NFKBIA	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.2434692382812	2	599.243323	1196.47209	0.20245	0.00012132	0.63443	0.00038018	0.83688	0.00050149	599.2435429697074	27.455	0.50826	27.416	27.165	27.673	-0.038523					18	11	2	0	0	0	0.85934	1	1308	1308		35.618	2.8059	1	37161	+		66932	17228	44488	44507	76166	76166					-0.1182838693150643
YSEKTQLYN	9	Unmodified	_YSEKTQLYN_					0	0	0		nc|ENSG00000132170|P37231-3|PPARG;ENST00000477039.5_1_3:12393091-12447643:+|nuORF;ENSG00000132170|ENST00000651735|PPARG;nc|ENSG00000132170|P37231-2|PPARG;nc|ENSG00000132170|P37231|PPARG	nc|ENSG00000132170|P37231-3|PPARG	nc|ENSG00000132170|P37231-3|PPARG	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.2763061523438	2	573.277303	1144.54005	0.85446	0.00048984	-0.88975	-0.00051008	-0.035296	-2.0234E-05	573.2769023299956	25.232	0.65456	25.195	24.838	25.493	-0.037176					36	17	3	0	0	0	0.7932	1	979	979		26.693	1.1189	1	63206			66933	3769	44489	44508	76167	76167					-0.026434724901719164
YSEQLLFY	8	Unmodified	_YSEQLLFY_					0	0	0			REV__ENSG00000198691|ENST00000370225|ABCA4	REV__ENSG00000198691|ENST00000370225|ABCA4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	531.758544921875	2	531.760758	1061.50696	-0.0035221	-1.8729E-06	-3.5971	-0.0019128	-3.6006	-0.0019146	531.7587300416486	83.002	0.86864	83.433	83.087	83.956	0.43108					51	20	3	0	0	0	0.86677	1	9628	9628		27.882	1.1893	1	1395300	+		66934	23357	44490	44509	76168	76168					-0.021330545422415526
YSERSAGY	8	Unmodified	_YSERSAGY_					0	0	0		ENSG00000135862|ENST00000258341|LAMC1	ENSG00000135862|ENST00000258341|LAMC1	ENSG00000135862|ENST00000258341|LAMC1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.7065734863281	2	466.709057	931.40356	-0.045544	-2.1256E-05	-2.2682	-0.0010586	-2.3137	-0.0010798	466.70771214249567	76.497	0.70937	76.897	76.367	77.077	0.3997					32	17	2	0	0	0	0.86791	1	8669	8669		28.254	5.2118	1	236870			66935	4059	44491	44510	76169	76169					-0.06488541930048086
YSEVANHI	8	Unmodified	_YSEVANHI_					0	0	0		ENSG00000153294|ENST00000283303|ADGRF4	ENSG00000153294|ENST00000283303|ADGRF4	ENSG00000153294|ENST00000283303|ADGRF4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	466.72747802734375	2	466.727249	931.439946	0.27426	0.00012801	1.2351	0.00057646	1.5094	0.00070447	466.72694153892775	34.642	0.64356	34.852	34.522	35.166	0.21003					26	15	2	0	0	0	0.89494	1	2579	2579		37.159	0	1	332730			66936	5230	44492	44511	76170	76170					-0.028516650333358484
YSEVANHI	8	Unmodified	_YSEVANHI_					0	0	0		ENSG00000153294|ENST00000283303|ADGRF4	ENSG00000153294|ENST00000283303|ADGRF4	ENSG00000153294|ENST00000283303|ADGRF4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	466.727249	931.439946	0.8846	0.00041287	-0.75297	-0.00035143	0.13163	6.1434E-05	466.7265729225597	34.555	0.55797	34.9	34.694	35.252	0.34529	0.023799	-0.00024263	NaN	37.159	21	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	245520			66937	5230	44492	44511							-0.028516650333358484
YSFLSVEDWE	10	Unmodified	_YSFLSVEDWE_					0	0	0			REV__ENST00000483344.1_1_3:172025153-172028698:+|nuORF	REV__ENST00000483344.1_1_3:172025153-172028698:+|nuORF	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	637.7709350585938	2	637.782418	1273.55028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.7	1	60.253	59.753	60.753	0.55323								0	0	0	0.45132	1	6319	6319		27.882	1.1893	1		+		66938	27486	44493	44512	76171	76171					-0.07554909555597078
YSFQFVFYGD	10	Unmodified	_YSFQFVFYGD_					0	0	0		nc|ENSG00000256590|A0JD37|TRDV3	nc|ENSG00000256590|A0JD37|TRDV3	nc|ENSG00000256590|A0JD37|TRDV3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	636.7854614257812	2	636.782222	1271.54989	0.043928	2.7973E-05	2.7625	0.0017591	2.8064	0.0017871	636.7836559309865	53.854	0.65403	53.792	53.482	54.136	-0.062061					34	15	3	0	0	0	0.86763	1	4454	4454		26.693	3.1702	1	454210			66939	15298	44494	44513	76172	76172					-0.07502284484803567
YSGGGGGG	8	Unmodified	_YSGGGGGG_					0	0	0		ENSG00000177733|ENST00000314940|HNRNPA0	REV__ENSG00000140836|ENST00000268489|ZFHX3	REV__ENSG00000140836|ENST00000268489|ZFHX3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	610.811767578125	1	611.24198	610.234704	0.43342	0.00026493	-0.51815	-0.00031672	-0.084729	-5.179E-05	611.2441750869214	51.609	0.12738	52.044	51.948	52.075	0.43505					4	2	2	0	0	0	0.4196	1	5131	5131		4.3163	0	1	92343	+		66940	15640	44495	44514	76173	76173					-0.08600398772898643
YSGGLDVYKVK	11	Unmodified	_YSGGLDVYKVK_					0	0	0			REV__nc|ENSG00000069535|P27338-2|MAOB	REV__nc|ENSG00000069535|P27338-2|MAOB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	410.223876953125	3	410.223923	1227.64994	0.034876	1.4307E-05	-1.728	-0.00070887	-1.6931	-0.00069456	410.22312463603447	23.2	0.4737	23.294	23.081	23.555	0.094501					41	22	2	0	0	0	0.74022	1	750	750		24.232	0	1	123240	+		66941	16584	44496	44515	76174	76174					0.045219528489724325
YSGGSSRDSY	10	Unmodified	_YSGGSSRDSY_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	539.7247314453125	2	539.725435	1077.43632	0.57792	0.00031192	-0.68408	-0.00036921	-0.10616	-5.7296E-05	539.7249558516484	24.279	0.58073	24.335	24.088	24.669	0.055487					22	14	2	0	0	0	0.3985	1	878	878		64.207	2.0999	1	86496	+		66942	17097	44497	44516	76175	76175					-0.09930379597835781
YSGGSSRDSY	10	Unmodified	_YSGGSSRDSY_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.7269287109375	2	539.725435	1077.43632	0.8846	0.00047744	-0.84103	-0.00045393	0.04357	2.3516E-05	539.7249405269661	24.84	0.53406	24.803	24.492	25.026	-0.037176					25	11	3	0	0	0	0.47091	1	949	949		58.23	23.078	1	73700	+		66943	17097	44497	44516	76176	76176					-0.09930379597835781
YSGGSSRDSY	10	Unmodified	_YSGGSSRDSY_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	539.7257080078125	2	539.725435	1077.43632	-0.050215	-2.7102E-05	-0.007128	-3.8472E-06	-0.057343	-3.0949E-05	539.7253759599041	24.744	0.53775	24.802	24.496	25.034	0.058167					42	24	2	0	0	0	0.60985	1	863	863		49.536	0	1	165940	+		66944	17097	44497	44516	76177	76177					-0.09930379597835781
YSGGSSRDSY	10	Unmodified	_YSGGSSRDSY_					0	0	0			REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	REV__ENST00000590347.5_1_19:1271297-1272439:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	539.723876953125	2	539.725435	1077.43632	0.15283	8.2487E-05	0.043542	2.3501E-05	0.19637	0.00010599	539.7254197099079	24.362	0.49944	24.463	24.239	24.738	0.10045					50	24	3	0	0	0	0.33399	1	840	840		69.628	0	1	183770	+		66945	17097	44497	44516	76178	76178					-0.09930379597835781
YSGISHGIL	9	Unmodified	_YSGISHGIL_					0	0	0			REV__nc|ENSG00000118961|Q9H6V9-4|LDAH	REV__nc|ENSG00000118961|Q9H6V9-4|LDAH	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	473.756103515625	2	473.753267	945.491981	-0.45102	-0.00021367	4.3338	0.0020532	3.8828	0.0018395	473.75530022326774	15.709	0.24084	15.111	15.007	15.248	-0.59873					13	8	2	0	0	0	0.77546	1	43	43		31.955	3.7006	1	82097	+		66946	18334	44498	44517	76179	76179					0.01705498380431436
YSGSAMYS	8	Unmodified	_YSGSAMYS_					0	0	0		ENST00000464696.2_1_12:83545187-83545313:+|nuORF	ENST00000464696.2_1_12:83545187-83545313:+|nuORF	ENST00000464696.2_1_12:83545187-83545313:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	433.2554626464844	2	433.173461	864.332369	4.7555	0.00206	-2.7142	-0.0011757	2.0413	0.00088422	433.17320809859507	106.91	0.17902	107.06	106.96	107.14	0.14929					6	4	2	0	0	0	0.4196	1	13069	13069		40.573	16.37	1	184060			66947	12094	44499	44518	76180	76180					-0.10522377959080131
YSHGLRIV	8	Unmodified	_YSHGLRIV_					0	0	0			REV__ENST00000426445.1_1_1:154309923-154313725:+|nuORF	REV__ENST00000426445.1_1_1:154309923-154313725:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	472.767333984375	2	472.769252	943.52395	-1.1355	-0.00053681	-3.1204	-0.0014752	-4.2559	-0.002012	472.7678138110799	84.157	3.9976	84.157	82.606	86.604	0					239	95	4	0	0	0	0.86791	1	7944	7944		28.254	0	1	292450	+		66948	17432	44500	44519	76181	76181					0.04992910854218735
YSHGLRIV	8	Unmodified	_YSHGLRIV_					0	0	0			REV__ENST00000426445.1_1_1:154309923-154313725:+|nuORF	REV__ENST00000426445.1_1_1:154309923-154313725:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.7669677734375	2	472.769252	943.52395	-0.10826	-5.1183E-05	-4.2794	-0.0020232	-4.3877	-0.0020744	472.76709197007693	81.653	2.5573	81.717	80.353	82.91	0.064384					120	61	3	0	0	0	0.884	1	8103	8103		33.516	0	1	144950	+		66949	17432	44500	44519	76182	76182					0.04992910854218735
YSHSSSSL	8	Unmodified	_YSHSSSSL_					0	0	0		ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1;ENST00000548142.1_1_12:56532791-56536718:+|nuORF	ENSG00000139641|ENST00000394048|ESYT1	ENSG00000139641|ENST00000394048|ESYT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.1959533691406	2	434.195782	866.377011	1.8663	0.00081033	-1.3277	-0.00057649	0.53856	0.00023384	434.19507963943687	24.164	0.90636	23.65	23.238	24.144	-0.51365					45	20	3	0	0	0	0.3646	1	1141	1141		85.359	14.064	1	948290			66950	4386	44501	44520	76183	76183					-0.061522308213625365
YSHSSSSL	8	Unmodified	_YSHSSSSL_					0	0	0		ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1;ENST00000548142.1_1_12:56532791-56536718:+|nuORF	ENSG00000139641|ENST00000394048|ESYT1	ENSG00000139641|ENST00000394048|ESYT1	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	434.195782	866.377011	0.38519	0.00016725	0.30785	0.00013367	0.69304	0.00030092	434.1957932808922	24.197	1.0569	23.815	23.365	24.422	-0.38178	0.08238	0.00074066	NaN	85.359	47	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	980280			66951	4386	44501	44520							-0.061522308213625365
YSIFQPERFDI	11	Unmodified	_YSIFQPERFDI_					0	0	0			REV__nc|ENSG00000138346|P51530-4|DNA2	REV__nc|ENSG00000138346|P51530-4|DNA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	472.57305908203125	3	472.238232	1413.69287	0.4853	0.00022918	2.064	0.00097469	2.5493	0.0012039	472.2391809158307	26.792	0.6008	26.833	26.51	27.111	0.040834					36	18	3	0	0	0	0.75779	1	1149	1149		20.315	1.0523	1	123500	+		66952	19459	44502	44521	76184	76184					0.002567229064197818
YSIIPLSA	8	Unmodified	_YSIIPLSA_					0	0	0			REV__nc|ENSG00000164118|Q9C0F1-2|CEP44	REV__nc|ENSG00000164118|Q9C0F1-2|CEP44	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	432.246826171875	2	432.247286	862.48002	-1.0325	-0.00044629	0.17629	7.6202E-05	-0.8562	-0.00037009	432.2475175582521	98.287	1.1701	98.287	97.806	98.976	0					69	28	4	0	0	0	0.86288	1	9891	9891		26.796	0	1	659880	+		66953	29988	44503	44522	76185	76185					0.043278816372207984
YSIIPLSA	8	Unmodified	_YSIIPLSA_					0	0	0			REV__nc|ENSG00000164118|Q9C0F1-2|CEP44	REV__nc|ENSG00000164118|Q9C0F1-2|CEP44	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	432.24603271484375	2	432.247286	862.48002	-0.17074	-7.3802E-05	-0.81396	-0.00035183	-0.9847	-0.00042564	432.24716926494176	98.219	1.1881	98.276	97.88	99.068	0.056839					57	26	3	0	0	0	0.884	1	10367	10367		33.516	6.7195	1	388720	+		66954	29988	44503	44522	76186	76186					0.043278816372207984
YSIIPLSA	8	Unmodified	_YSIIPLSA_					0	0	0			REV__nc|ENSG00000164118|Q9C0F1-2|CEP44	REV__nc|ENSG00000164118|Q9C0F1-2|CEP44	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	432.2467346191406	2	432.247286	862.48002	-1.8339	-0.00079269	1.4654	0.00063343	-0.36844	-0.00015926	432.24785776580563	97.992	1.1927	98.188	97.805	98.997	0.19585					63	26	3	0	0	0	0.86288	1	10089	10089		26.796	5.0938	1	609590	+		66955	29988	44503	44522	76187	76187					0.043278816372207984
YSIKPVIKAS	10	Unmodified	_YSIKPVIKAS_					0	0	0			REV__ENSG00000108256|ENST00000225388|NUFIP2	REV__ENSG00000108256|ENST00000225388|NUFIP2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	553.3318481445312	2	553.334424	1104.6543	0.81959	0.00045351	-4.4582	-0.0024669	-3.6386	-0.0020134	553.3317918445606	96.793	1.7474	96.956	96.403	98.15	0.16317					118	40	4	0	0	0	0.85466	2	10049	9973;10049		32.812	2.4947	1	2701500	+		66956	17701	44504	44523	76188;76189	76189					0.10615462062560255
YSKDEPHMR	9	Unmodified	_YSKDEPHMR_					0	0	0			REV__ENSG00000186300|ENST00000334241|ZNF555	REV__ENSG00000186300|ENST00000334241|ZNF555	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.1898803710938	2	581.769123	1161.52369	-1.1361	-0.00066094	0.22666	0.00013186	-0.90944	-0.00052908	581.7687888368898	34.159	1.4335	34.161	33.128	34.561	0.0026054					33	31	2	0	0	0	0.20789	1	2080	2080		29.15	0	1	43420	+		66957	22841	44505	44524	76190	76190					-0.05060876927927893
YSKSCVKCKY	10	Unmodified	_YSKSCVKCKY_					0	0	0			REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	REV__ENST00000575471.2_1_16:31925765-31927799:+|nuORF	MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	604.7991943359375	2	604.793752	1207.57295	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.64	1	111.58	111.08	112.08	-0.059937								0	0	0	0.45132	1	12150	12150		19.997	1.6724	1		+		66958	22810	44506	44525	76191	76191					-0.022533049633466362
YSLDHISSL	9	Unmodified	_YSLDHISSL_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160;nc|ENSG00000030066|Q12769-3|NUP160;ENST00000527126.1_1_11:47843172-47843701:-|nuORF	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	517.2869873046875	2	517.761289	1033.50803	-0.48716	-0.00025223	0.51721	0.00026779	0.030055	1.5561E-05	517.761531996902	59.455	0.60838	59.846	59.567	60.175	0.39077					29	14	3	0	0	0	0.20789	1	6265	6265		35.618	6.4687	1	373300			66959	880	44507	44526	76192	76192					-0.007388401733123828
YSLEFGPPDPS	11	Unmodified	_YSLEFGPPDPS_					0	0	0		ENSG00000072071|ENST00000361434|ADGRL1;nc|ENSG00000072071|O94910|ADGRL1	ENSG00000072071|ENST00000361434|ADGRL1	ENSG00000072071|ENST00000361434|ADGRL1	MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.3565673828125	2	604.777136	1207.53972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.097	1	16.017	15.517	16.517	-0.080017								0	0	0	0.56276	1	80	80		24.519	4.5224	1				66960	1267	44508	44527	76193	76193					-0.05574892210051985
YSLFAGLGL	9	Unmodified	_YSLFAGLGL_					0	0	0			REV__ENST00000514430.5_1_4:103635650-103635701:-|nuORF	REV__ENST00000514430.5_1_4:103635650-103635701:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	470.758544921875	2	470.760561	939.506569	-0.46312	-0.00021802	-3.8995	-0.0018357	-4.3626	-0.0020537	470.7585161118573	18.933	0.4722	18.303	18.06	18.533	-0.6296					16	10	2	0	0	0	0.69914	1	463	463		40.573	1.3198	1	120590	+		66961	28013	44509	44528	76194	76194					0.03439570528564673
YSLFAGLGL	9	Unmodified	_YSLFAGLGL_					0	0	0			REV__ENST00000514430.5_1_4:103635650-103635701:-|nuORF	REV__ENST00000514430.5_1_4:103635650-103635701:-|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	470.760561	939.506569	-0.46312	-0.00021802	-3.8995	-0.0018357	-4.3626	-0.0020537	470.7585161118573	18.933	0.4722	18.303	18.06	18.533	-0.6296	0.017272	0.00027792	NaN	40.573	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120590	+		66962	28013	44509	44528							0.03439570528564673
YSLIIVIRSMA	11	Unmodified	_YSLIIVIRSMA_					0	0	0		nc|ENSG00000149488|Q8TDI7-3|TMC2;ENSG00000149488|ENST00000358864|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3693237304688	2	633.367941	1264.72133	1.4972	0.00094828	0.53741	0.00034038	2.0346	0.0012887	633.3681812370636	95.449	2.3087	95.87	94.551	96.859	0.42051					197	55	4	0	0	0	0.60058	1	11430	11430		44.377	3.599	1	3612700			66963	5030	44510	44529	76195	76195					0.09955749281994031
YSLTFMRFA	9	Unmodified	_YSLTFMRFA_					0	0	0		ENSG00000060762|ENST00000360961|MPC1	ENSG00000060762|ENST00000360961|MPC1	ENSG00000060762|ENST00000360961|MPC1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	568.7486572265625	2	568.283877	1134.5532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.3	1	68.3	67.8	68.8	0								0	0	0	0.30778	1	6062	6062		27.882	1.1893	1				66964	1070	44511	44530	76196	76196					-0.008693129117773424
YSLTIVSG	8	Unmodified	_YSLTIVSG_					0	0	0		nc|ENSG00000138193|Q9P212-2|PLCE1;ENSG00000138193|ENST00000371380|PLCE1	nc|ENSG00000138193|Q9P212-2|PLCE1	nc|ENSG00000138193|Q9P212-2|PLCE1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.2264099121094	2	420.229094	838.443634	-1.4714	-0.00061832	-1.5274	-0.00064185	-2.9988	-0.0012602	420.22834377301643	76.819	2.0914	76.909	74.945	77.036	0.089363					112	66	2	0	0	0	0.87922	1	7064	7064		31.955	6.5047	1	246920			66965	4282	44512	44531	76197	76197					0.01795004740540662
YSMAAQIKLL	10	Unmodified	_YSMAAQIKLL_					0	0	0		ENSG00000166685|ENST00000299886|COG1	ENSG00000166685|ENST00000299886|COG1	ENSG00000166685|ENST00000299886|COG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	568.8235473632812	2	569.32046	1136.62637	0.94291	0.00053682	1.1111	0.00063256	2.054	0.0011694	569.32109922375	30.266	0.47997	30.176	29.875	30.354	-0.089544					23	10	3	0	0	0	0.37624	1	2003	2003		15.642	4.1308	1	114610			66966	6220	44513	44532	76198	76198					0.06351815810808148
YSMMARRRTK	10	Unmodified	_YSMMARRRTK_					0	0	0		ENST00000398804.7_1_1:44165719-44170106:-|nuORF;ENST00000434346.1_1_1:44168245-44170073:-|nuORF;ENST00000453015.1_1_1:44169233-44170247:-|nuORF	ENST00000398804.7_1_1:44165719-44170106:-|nuORF	ENST00000398804.7_1_1:44165719-44170106:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	433.8985595703125	3	433.89727	1298.66998	0.56349	0.0002445	1.851	0.00080315	2.4145	0.0010476	433.8979358306318	19.865	0.70017	19.395	19.113	19.813	-0.46967					40	14	4	0	0	0	0.85692	1	578	578		36.318	1.1656	1	460470			66967	11192	44514	44533	76199	76199					0.032591020363042844
YSNHTDGVGE	10	Unmodified	_YSNHTDGVGE_					0	0	0			REV__ENSG00000164068|ENST00000327697|RNF123	REV__ENSG00000164068|ENST00000327697|RNF123	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	539.7257080078125	2	539.725435	1077.43632	0.8846	0.00047744	-0.84103	-0.00045393	0.04357	2.3516E-05	539.7249405269661	24.84	0.53406	24.803	24.492	25.026	-0.037176					25	11	3	0	0	0	0.18075	1	938	938		90.601	14.431	1	73700	+		66968	21022	44515	44534	76200	76200					-0.09930379597835781
YSNHTDGVGE	10	Unmodified	_YSNHTDGVGE_					0	0	0			REV__ENSG00000164068|ENST00000327697|RNF123	REV__ENSG00000164068|ENST00000327697|RNF123	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	539.725435	1077.43632	0.15283	8.2487E-05	0.043542	2.3501E-05	0.19637	0.00010599	539.7254197099079	24.362	0.49944	24.463	24.239	24.738	0.10045	-0.144	0.00055574	NaN	90.601	50	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183770	+		66969	21022	44515	44534							-0.09930379597835781
YSNLLCDLL	9	Carbamidomethyl (C)	_YSNLLC(Carbamidomethyl (C))DLL_	YSNLLC(1)DLL		YSNLLC(72)DLL		0	1	0		nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;ENSG00000050820|ENST00000162330|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-2|BCAR1;ENST00000566982.1_1_16:75263411-75272069:-|nuORF;nc|ENSG00000050820|P56945-4|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1	nc|ENSG00000050820|P56945-6|BCAR1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	555.7769775390625	2	555.778625	1109.5427	-0.16725	-9.2954E-05	-2.8883	-0.0016052	-3.0555	-0.0016982	555.776990924581	78.04	1.0719	78.604	78.007	79.079	0.56332					56	25	4	0	0	0	0.21969	1	8892	8892		71.877	7.6702	1	858780			66970	14751;14752	44516	44535	76201	76201	194				-0.007693403568964641
YSNYLGLVVT	10	Unmodified	_YSNYLGLVVT_					0	0	0			REV__nc|ENSG00000072952|Q9Y6F6-6|IRAG1	REV__nc|ENSG00000072952|Q9Y6F6-6|IRAG1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	564.3560180664062	2	564.800414	1127.58628	6.2605	0.0035359	-3.2402	-0.0018301	3.0203	0.0017059	564.797841042531	116.43	0.057213	116.4	116.36	116.42	-0.037872					4	2	2	0	0	0	0.37624	1	13965	13965		26.693	6.2111	1	11500	+		66971	16663	44517	44536	76202	76202					0.02758592411896643
YSPGCSSH	8	Unmodified	_YSPGCSSH_					0	0	0			REV__nc|ENSG00000105991|P49639-2|HOXA1	REV__nc|ENSG00000105991|P49639-2|HOXA1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	419.18359375	2	419.163428	836.312302	1.3803	0.00057857	2.8987	0.001215	4.279	0.0017936	419.16464351972576	97.9	0.40909	98.276	98.081	98.49	0.37679					20	9	3	0	0	0	0.4196	1	11811	11811		44.531	15.382	1	169740	+		66972	17590	44518	44537	76203	76203					-0.11240128899021329
YSPIFAPPL	9	Unmodified	_YSPIFAPPL_					0	0	0			REV__nc|ENSG00000057657|O75626-3|PRDM1	REV__nc|ENSG00000057657|O75626-3|PRDM1	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.8138122558594	2	502.776211	1003.53787	-0.061811	-3.1077E-05	1.8186	0.00091436	1.7568	0.00088329	502.7761379750243	97.427	0.42286	97.484	97.251	97.674	0.056961					13	9	2	0	0	0	0.20789	1	10263	10263		40.573	2.7611	1	67785	+		66973	16428	44519	44538	76204	76204					0.036241435626379825
YSQPGGDGSY	10	Unmodified	_YSQPGGDGSY_					0	0	0		ENSG00000116783|ENST00000326637|TNNI3K;nc|ENSG00000116783|Q59H18-4|TNNI3K;nc|ENSG00000116783|Q59H18-1|TNNI3K;nc|ENSG00000116783|Q59H18-3|TNNI3K	ENSG00000116783|ENST00000326637|TNNI3K	ENSG00000116783|ENST00000326637|TNNI3K	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	515.7083740234375	2	515.709254	1029.40395	0.035209	1.8157E-05	-0.0094014	-4.8484E-06	0.025807	1.3309E-05	515.7091283131688	29.984	0.87046	29.941	29.555	30.426	-0.043095					44	19	3	0	0	0	0.86218	1	1626	1626		32.812	2.3088	1	395650			66974	2947	44520	44539	76205	76205					-0.10957167000833579
YSQQCPSSTCC	11	Unmodified	_YSQQCPSSTCC_					0	0	0			REV__ENSG00000221837|ENST00000397911|KRTAP10-9	REV__ENSG00000221837|ENST00000397911|KRTAP10-9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	603.713623046875	2	603.714841	1205.41513	-0.030007	-1.8116E-05	-2.5099	-0.0015152	-2.5399	-0.0015334	603.713215805059	28.619	0.50285	28.655	28.441	28.944	0.036068					28	16	3	0	0	0	0.70737	1	1369	1369		30.318	4.8675	1	59932	+		66975	23706	44521	44540	76206	76206					-0.1793617228486255
YSRHRLVPLL	10	Unmodified	_YSRHRLVPLL_					0	0	0		ENSG00000100596|ENST00000216484|SPTLC2	ENSG00000100596|ENST00000216484|SPTLC2	ENSG00000100596|ENST00000216484|SPTLC2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	627.3838500976562	2	627.377489	1252.74043	6.5839	0.0041306	1.7603	0.0011044	8.3442	0.005235	627.3785330345283	117.44	0.6562	117.37	116.88	117.54	-0.064964					43	30	2	0	0	0	0.85694	1	14027	14027		21.96	3.6978	1	34117			66976	1853	44522	44541	76207	76207					0.1241646668793237
YSSITKLW	8	Unmodified	_YSSITKLW_					0	0	0			REV__ENSG00000174231|ENST00000304992|PRPF8	REV__ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	499.2715148925781	2	499.271293	996.528032	-1.7639	-0.00088068	2.3239	0.0011603	0.56001	0.0002796	499.27219649148446	31.598	0.49176	31.598	31.353	31.845	0					30	18	2	0	0	0	0.86288	1	1531	1531		26.796	2.2769	1	51983	+		66977	21981	44523	44542	76208	76208					0.029629555572796562
YSTAHTTGP	9	Unmodified	_YSTAHTTGP_					0	0	0		nc|ENSG00000005379|O95153-2|TSPOAP1;ENSG00000005379|ENST00000343736|TSPOAP1;nc|ENSG00000005379|O95153-3|TSPOAP1	nc|ENSG00000005379|O95153-2|TSPOAP1	nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	467.71478271484375	2	467.716882	933.41921	-1.1651	-0.00054494	-1.5881	-0.00074278	-2.7532	-0.0012877	467.71593243095464	72.382	0.63271	72.462	72.095	72.728	0.080032					44	21	3	0	0	0	0.76255	2	6637	6611;6637		35.618	5.1146	1	143690			66978	682	44524	44543	76209;76210	76210					-0.05016255413011095
YSTGGCLH	8	Unmodified	_YSTGGCLH_					0	0	0		ENSG00000120256|ENST00000239367|LRP11	ENSG00000120256|ENST00000239367|LRP11	ENSG00000120256|ENST00000239367|LRP11	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	419.184326171875	2	419.18162	836.348688	2.0844	0.00087374	2.1028	0.00088145	4.1872	0.0017552	419.1826528067583	100.01	2.1606	100.34	99.379	101.54	0.33294					130	55	5	0	0	0	0.89457	1	12146	12146		37.028	6.5248	1	8540100			66979	3120	44525	44544	76211	76211					-0.0760325200232046
YSVETLPQH	9	Unmodified	_YSVETLPQH_					0	0	0			REV__ENST00000437336.1_1_1:154350783-154351305:-|nuORF	REV__ENST00000437336.1_1_1:154350783-154351305:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.2671508789062	2	537.266739	1072.51892	-0.47322	-0.00025425	0.31995	0.0001719	-0.15328	-8.235E-05	537.2667807229059	59.064	1.4116	59.098	58.581	59.993	0.033905					72	39	4	0	0	0	0.74721	1	5424	5424		37.159	6.6555	1	512280	+		66980	26704	44526	44545	76212	76212					-0.014434377990482972
YSVSAYVGPY	10	Unmodified	_YSVSAYVGPY_					0	0	0			REV__ENSG00000185888|ENST00000366757|PRSS38	REV__ENSG00000185888|ENST00000366757|PRSS38	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	553.2479858398438	2	553.263665	1104.51278	-0.2027	-0.00011215	-3.5007	-0.0019368	-3.7034	-0.002049	553.2616588537818	36.082	0.36682	36.026	35.788	36.155	-0.055901					11	7	2	0	0	0	0.37624	1	2387	2387		21.96	9.753	1	29802	+		66981	22800	44527	44546	76213	76213					-0.03529956030570247
YSVSCLGP	8	Unmodified	_YSVSCLGP_					0	0	0		ENST00000543009.5_2_11:71746988-71753144:-|nuORF	ENST00000543009.5_2_11:71746988-71753144:-|nuORF	ENST00000543009.5_2_11:71746988-71753144:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	413.19378662109375	2	413.194196	824.37384	0.36856	0.00015229	-1.5039	-0.00062141	-1.1354	-0.00046913	413.19353569569154	84.288	3.3037	84.723	83.664	86.967	0.43538					144	80	2	0	0	0	0.88915	3	9789	9789;9800;9812		44.531	11.015	1	9340100			66982	13545	44528	44547	76214;76215;76216	76214					-0.04537197199726961
YSVSCLGP	8	Unmodified	_YSVSCLGP_					0	0	0		ENST00000543009.5_2_11:71746988-71753144:-|nuORF	ENST00000543009.5_2_11:71746988-71753144:-|nuORF	ENST00000543009.5_2_11:71746988-71753144:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	413.19403076171875	2	413.194196	824.37384	-0.094873	-3.9201E-05	-1.7383	-0.00071825	-1.8331	-0.00075745	413.1937900034763	84.315	3.1314	84.763	83.717	86.848	0.44736					207	76	5	0	0	0	0.86791	6	9762	9762;9811;9822;9833;9844;9856		37.028	10.232	1	10183000			66983	13545	44528	44547	76217;76218;76219;76220;76221;76222	76217					-0.04537197199726961
YSVSSMPYW	9	Unmodified	_YSVSSMPYW_					0	0	0		chr1:215235179-215235691|15|16.27|0.48|5.07|+|ENST00000486921|KCNK2,KCNK2	chr1:215235179-215235691|15|16.27|0.48|5.07|+|ENST00000486921|KCNK2,KCNK2	chr1:215235179-215235691|15|16.27|0.48|5.07|+|ENST00000486921|KCNK2,KCNK2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	560.2440795898438	2	560.244418	1118.47428	-0.51849	-0.00029048	0.61433	0.00034418	0.095844	5.3696E-05	560.2447202398796	26.751	0.61838	26.792	26.47	27.088	0.040834					32	18	2	0	0	0	0.69914	1	1160	1160		40.573	1.3198	1	72536			66984	40	44529	44548	76223	76223					-0.08021584936727777
YSYTDKASDF	10	Unmodified	_YSYTDKASDF_					0	0	0		ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	598.7608032226562	2	598.758943	1195.50333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.589	1	70.589	70.089	71.089	0								0	0	0	0.45132	1	6289	6289		44.377	7.9304	1				66985	4549	44530	44549	76224	76224					-0.08659769106770909
YTAFSRLILIL	11	Unmodified	_YTAFSRLILIL_					0	0	0		ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	ENSG00000174231|ENST00000304992|PRPF8	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.26751708984375	3	437.267463	1308.78056	-0.53562	-0.00023421	1.5379	0.00067249	1.0023	0.00043828	437.26805301890676	51.906	1.7187	51.821	51.308	53.027	-0.084534					201	52	5	0	0	0	0.74022	1	4317	4317		24.232	3.1996	1	4132000			66986	6918	44531	44550	76225	76225					0.13851968567882977
YTARRVRKG	9	Unmodified	_YTARRVRKG_					0	0	0		nc|ENSG00000138738|Q9NQX1-4|PRDM5;nc|ENSG00000138738|Q9NQX1-2|PRDM5;ENSG00000138738|ENST00000264808|PRDM5;ENST00000505033.1_1_4:121806904-121843799:-|nuORF;nc|ENSG00000138738|Q9NQX1-3|PRDM5;ENST00000505484.5_1_4:121737976-121843799:-|nuORF;ENST00000512845.5_1_4:121737455-121843799:-|nuORF	nc|ENSG00000138738|Q9NQX1-4|PRDM5	nc|ENSG00000138738|Q9NQX1-4|PRDM5	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.830810546875	2	553.830706	1105.64686	-0.60953	-0.00033757	-0.31573	-0.00017486	-0.92525	-0.00051243	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.78536	1	8912	8912		29.15	3.5755	1	3935500			66987	4323	44532	44551	76226	76226					0.09826167305504896
YTARRVRKG	9	Unmodified	_YTARRVRKG_					0	0	0		nc|ENSG00000138738|Q9NQX1-4|PRDM5;nc|ENSG00000138738|Q9NQX1-2|PRDM5;ENSG00000138738|ENST00000264808|PRDM5;ENST00000505033.1_1_4:121806904-121843799:-|nuORF;nc|ENSG00000138738|Q9NQX1-3|PRDM5;ENST00000505484.5_1_4:121737976-121843799:-|nuORF;ENST00000512845.5_1_4:121737455-121843799:-|nuORF	nc|ENSG00000138738|Q9NQX1-4|PRDM5	nc|ENSG00000138738|Q9NQX1-4|PRDM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	553.830322265625	2	553.830706	1105.64686	-0.7821	-0.00043315	-0.068585	-3.7985E-05	-0.85069	-0.00047114	553.8305421701066	90.781	3.7274	90.85	89.688	93.416	0.069328					258	88	3	0	0	0	0.78983	1	9406	9406		27.882	4.3595	1	5219600			66988	4323	44532	44551	76227	76227					0.09826167305504896
YTARRVRKG	9	Unmodified	_YTARRVRKG_					0	0	0		nc|ENSG00000138738|Q9NQX1-4|PRDM5;nc|ENSG00000138738|Q9NQX1-2|PRDM5;ENSG00000138738|ENST00000264808|PRDM5;ENST00000505033.1_1_4:121806904-121843799:-|nuORF;nc|ENSG00000138738|Q9NQX1-3|PRDM5;ENST00000505484.5_1_4:121737976-121843799:-|nuORF;ENST00000512845.5_1_4:121737455-121843799:-|nuORF	nc|ENSG00000138738|Q9NQX1-4|PRDM5	nc|ENSG00000138738|Q9NQX1-4|PRDM5	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	553.8301391601562	2	553.830706	1105.64686	1.287	0.00071279	-2.2482	-0.0012451	-0.96123	-0.00053236	553.8293247400366	90.53	3.8003	90.576	89.481	93.281	0.04644					354	90	5	0	0	0	0.7932	1	9254	9254		25.574	3.6142	1	5348100			66989	4323	44532	44551	76228	76228					0.09826167305504896
YTARRVRKG	9	Unmodified	_YTARRVRKG_					0	0	0		nc|ENSG00000138738|Q9NQX1-4|PRDM5;nc|ENSG00000138738|Q9NQX1-2|PRDM5;ENSG00000138738|ENST00000264808|PRDM5;ENST00000505033.1_1_4:121806904-121843799:-|nuORF;nc|ENSG00000138738|Q9NQX1-3|PRDM5;ENST00000505484.5_1_4:121737976-121843799:-|nuORF;ENST00000512845.5_1_4:121737455-121843799:-|nuORF	nc|ENSG00000138738|Q9NQX1-4|PRDM5	nc|ENSG00000138738|Q9NQX1-4|PRDM5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	553.829833984375	2	553.830706	1105.64686	0.84671	0.00046893	-1.3221	-0.00073225	-0.47544	-0.00026331	553.8298496888843	90.239	3.547	90.69	89.692	93.239	0.45058					266	87	4	0	0	0	0.76764	1	10776	10776		34.173	3.6689	1	5381700			66990	4323	44532	44551	76229	76229					0.09826167305504896
YTATTQAQTY	10	Unmodified	_YTATTQAQTY_					0	0	0			REV__ENST00000483415.5_1_22:29664325-29684776:+|nuORF	REV__ENST00000483415.5_1_22:29664325-29684776:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	574.267333984375	2	574.266936	1146.51932	0.84087	0.00048288	-0.27906	-0.00016026	0.5618	0.00032262	574.2666801981707	96.876	5.0715	97.039	94.33	99.401	0.16316					175	119	3	0	0	0	0.82886	1	10175	10175		37.812	0.65241	1	185070	+		66991	22560	44533	44552	76230	76230					-0.04808062869847163
YTDDTEEDLD	10	Unmodified	_YTDDTEEDLD_					0	0	0		ENSG00000165650|ENST00000334464|PDZD8	ENSG00000165650|ENST00000334464|PDZD8	ENSG00000165650|ENST00000334464|PDZD8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.2369079589844	3	405.822701	1214.44627	-1.8608	-0.00075516	1.4454	0.00058657	-0.41543	-0.00016859	406.15749553761293	62.877	0.36695	62.991	62.834	63.201	0.11388					24	18	2	0	0	0	0.37624	1	5510	5510		11.636	4.6172	1	107970			66992	6105	44534	44553	76231	76231					-0.15237281173790507
YTDENQHQY	9	Unmodified	_YTDENQHQY_					0	0	0		ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	599.2432250976562	2	599.243992	1196.47343	0.8354	0.00050061	-0.52429	-0.00031418	0.31111	0.00018643	599.2435587388885	27.52	0.42971	27.588	27.365	27.795	0.06868					37	21	2	0	0	0	0.71772	2	1100	1095;1100		39.253	9.7538	1	148090			66993	6031	44535	44554	76232;76233	76233					-0.11694708052095848
YTDENQHQY	9	Unmodified	_YTDENQHQY_					0	0	0		ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	599.2462768554688	2	599.243992	1196.47343	0.23512	0.00014089	-0.089932	-5.3891E-05	0.14519	8.7003E-05	599.2437605972377	27.031	0.39463	27.14	27.013	27.408	0.10901					38	17	3	0	0	0	0.25483	1	1062	1062		68.787	22.33	1	142260			66994	6031	44535	44554	76234	76234					-0.11694708052095848
YTDENQHQY	9	Unmodified	_YTDENQHQY_					0	0	0		ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.2442626953125	2	599.243992	1196.47343	0.87278	0.00052301	-0.59364	-0.00035574	0.27913	0.00016727	599.2434998183318	27.186	0.45232	27.214	26.996	27.448	0.02817					53	22	4	0	0	0	0.2083	1	1075	1075		72.879	26.927	1	148520			66995	6031	44535	44554	76235	76235					-0.11694708052095848
YTDENQHQY	9	Unmodified	_YTDENQHQY_					0	0	0		ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	599.243992	1196.47343	0.01478	8.8568E-06	-0.081844	-4.9045E-05	-0.067064	-4.0188E-05	599.2439285950039	27.246	0.33533	27.287	27.111	27.446	0.040834	-0.078915	0.00012118	NaN	72.879	23	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47545			66996	6031	44535	44554							-0.11694708052095848
YTDENQHQY	9	Unmodified	_YTDENQHQY_					0	0	0		ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	599.243992	1196.47343	0.20245	0.00012132	-0.48148	-0.00028852	-0.27903	-0.00016721	599.2435429697074	27.455	0.50826	27.416	27.165	27.673	-0.038523	0.050575	-0.00035778	NaN	72.879	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37161			66997	6031	44535	44554							-0.11694708052095848
YTDENQHQY	9	Unmodified	_YTDENQHQY_					0	0	0		ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	ENSG00000164953|ENST00000453321|TMEM67	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	599.243992	1196.47343	-0.78041	-0.00046765	0.92364	0.00055348	0.14323	8.5828E-05	599.2446244393227	27.572	0.38282	27.548	27.347	27.73	-0.023556	0.18278	0.0013262	NaN	72.879	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40319			66998	6031	44535	44554							-0.11694708052095848
YTDGPGGSGQY	11	Unmodified	_YTDGPGGSGQY_					0	0	0		nc|ENSG00000110697|O00562-2|PITPNM1;ENSG00000110697|ENST00000356404|PITPNM1;ENST00000451868.2_1_12:123484929-123519149:-|nuORF	nc|ENSG00000110697|O00562-2|PITPNM1;ENST00000451868.2_1_12:123484929-123519149:-|nuORF	nc|ENSG00000110697|O00562-2|PITPNM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	551.2261962890625	2	551.22781	1100.44107	-0.3189	-0.00017579	-1.6876	-0.00093023	-2.0065	-0.001106	551.226698218295	40.322	0.52887	40.291	39.966	40.495	-0.030991					19	13	2	0	0	0	0.70737	1	2861	2861		30.318	4.7437	1	91709			66999	2534;11906	44536	44555	76236	76236					-0.10513495455074917
YTDGPGGSGQY	11	Unmodified	_YTDGPGGSGQY_					0	0	0		nc|ENSG00000110697|O00562-2|PITPNM1;ENSG00000110697|ENST00000356404|PITPNM1;ENST00000451868.2_1_12:123484929-123519149:-|nuORF	nc|ENSG00000110697|O00562-2|PITPNM1;ENST00000451868.2_1_12:123484929-123519149:-|nuORF	nc|ENSG00000110697|O00562-2|PITPNM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	551.2261962890625	2	551.22781	1100.44107	-0.67044	-0.00036956	-1.4222	-0.00078398	-2.0927	-0.0011535	551.2268606681153	40.291	0.54041	40.247	39.922	40.462	-0.043694					18	12	2	0	0	0	0.51007	1	2957	2957		51.193	14.746	1	105010			67000	2534;11906	44536	44555	76237	76237					-0.10513495455074917
YTDGPGGSGQY	11	Unmodified	_YTDGPGGSGQY_					0	0	0		nc|ENSG00000110697|O00562-2|PITPNM1;ENSG00000110697|ENST00000356404|PITPNM1;ENST00000451868.2_1_12:123484929-123519149:-|nuORF	nc|ENSG00000110697|O00562-2|PITPNM1;ENST00000451868.2_1_12:123484929-123519149:-|nuORF	nc|ENSG00000110697|O00562-2|PITPNM1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	551.7300415039062	2	551.22781	1100.44107	-0.85618	-0.00047195	-1.0347	-0.00057037	-1.8909	-0.0010423	551.2271858519231	40.167	0.50513	40.176	39.9	40.405	0.0092773					19	11	2	0	0	0	0.48529	1	2893	2893		52.937	10.462	1	122950			67001	2534;11906	44536	44555	76238	76238					-0.10513495455074917
YTDHGSDHHY	10	Unmodified	_YTDHGSDHHY_					0	0	0		ENST00000541475.5_1_11:114278100-114278526:+|nuORF;ENST00000265882.5_1_2:80389676-80390174:-|nuORF;nc|ENSG00000076053|Q9Y580|RBM7;ENSG00000076053|ENST00000375490|RBM7	ENST00000541475.5_1_11:114278100-114278526:+|nuORF	ENST00000541475.5_1_11:114278100-114278526:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	616.2412719726562	2	616.241783	1230.46901	0.74853	0.00046128	-0.25352	-0.00015623	0.49501	0.00030505	616.2417797697477	17.774	0.22597	17.85	17.742	17.968	0.075443					14	6	3	0	0	0	0.77314	1	211	211		40.778	18.199	1	72945			67002	1349	44537	44556	76239	76239					-0.1370017247497799
YTDHGSDHHY	10	Unmodified	_YTDHGSDHHY_					0	0	0		ENST00000541475.5_1_11:114278100-114278526:+|nuORF;ENST00000265882.5_1_2:80389676-80390174:-|nuORF;nc|ENSG00000076053|Q9Y580|RBM7;ENSG00000076053|ENST00000375490|RBM7	ENST00000541475.5_1_11:114278100-114278526:+|nuORF	ENST00000541475.5_1_11:114278100-114278526:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	616.241783	1230.46901	-0.076972	-4.7433E-05	-0.17567	-0.00010825	-0.25264	-0.00015569	616.2416601623232	18.122	0.24127	18.045	17.906	18.148	-0.07671	0.080214	0.00024015	NaN	40.778	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78964			67003	1349	44537	44556							-0.1370017247497799
YTDHGSDHHY	10	Unmodified	_YTDHGSDHHY_					0	0	0		ENST00000541475.5_1_11:114278100-114278526:+|nuORF;ENST00000265882.5_1_2:80389676-80390174:-|nuORF;nc|ENSG00000076053|Q9Y580|RBM7;ENSG00000076053|ENST00000375490|RBM7	ENST00000541475.5_1_11:114278100-114278526:+|nuORF	ENST00000541475.5_1_11:114278100-114278526:+|nuORF	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4		2	616.241783	1230.46901	0.19588	0.00012071	-0.90854	-0.00055988	-0.71266	-0.00043917	616.2409563680495	18.078	0.25132	17.999	17.867	18.119	-0.078943	0.034571	-0.00066311	NaN	40.778	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90405			67004	1349	44537	44556							-0.1370017247497799
YTDHQNSSSY	10	Unmodified	_YTDHQNSSSY_					0	0	0		ENSG00000125398|ENST00000245479|SOX9	ENSG00000125398|ENST00000245479|SOX9	ENSG00000125398|ENST00000245479|SOX9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	601.7451782226562	2	601.241449	1200.46835	0.22608	0.00013593	0.084845	5.1012E-05	0.31093	0.00018694	601.2412124103296	24.569	0.50886	24.625	24.318	24.827	0.055487					21	13	2	0	0	0	0.26675	3	903	903;908;924		76.17	26.634	1	45073			67005	3387	44538	44557	76240;76241;76242	76240					-0.12387011914688628
YTDHQNSSSY	10	Unmodified	_YTDHQNSSSY_					0	0	0		ENSG00000125398|ENST00000245479|SOX9	ENSG00000125398|ENST00000245479|SOX9	ENSG00000125398|ENST00000245479|SOX9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	601.2422485351562	2	601.241449	1200.46835	0.15963	9.5974E-05	-0.40878	-0.00024578	-0.24915	-0.0001498	601.240885345995	24.992	0.46951	24.951	24.72	25.19	-0.04117					20	10	3	0	0	0	0.31985	1	1018	1018		70.816	19.481	1	74268			67006	3387	44538	44557	76243	76243					-0.12387011914688628
YTDHQNSSSY	10	Unmodified	_YTDHQNSSSY_					0	0	0		ENSG00000125398|ENST00000245479|SOX9	ENSG00000125398|ENST00000245479|SOX9	ENSG00000125398|ENST00000245479|SOX9	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	601.2432861328125	2	601.241449	1200.46835	-0.6374	-0.00038323	0.61935	0.00037238	-0.018048	-1.0851E-05	601.2417875920916	24.949	0.45388	24.912	24.705	25.159	-0.037178					20	9	3	0	0	0	0.38353	2	944	944;955		65.465	6.6834	1	69859			67007	3387	44538	44557	76244;76245	76244					-0.12387011914688628
YTDIVKMLL	9	Oxidation (M)	_YTDIVKM(Oxidation (M))LL_		YTDIVKM(1)LL		YTDIVKM(46)LL	0	0	1		ENSG00000164331|ENST00000296785|ANKRA2	ENSG00000164331|ENST00000296785|ANKRA2	ENSG00000164331|ENST00000296785|ANKRA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	556.3065185546875	2	556.307018	1110.59948	1.3201	0.0007344	0.48111	0.00026765	1.8012	0.001002	556.3071642456794	90.147	3.6509	90.194	89.308	92.959	0.046631					153	86	2	0	0	0	0.62081	1	9351	9351		45.952	7.2379	1	488600			67008	5957	44539	44558	76246	76246		102			0.048607071996229934
YTDIVKMLL	9	Oxidation (M)	_YTDIVKM(Oxidation (M))LL_					0	0	1		ENSG00000164331|ENST00000296785|ANKRA2	ENSG00000164331|ENST00000296785|ANKRA2	ENSG00000164331|ENST00000296785|ANKRA2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	556.307018	1110.59948	0.97845	0.00054432	0.43147	0.00024003	1.4099	0.00078435	556.3070846335214	89.556	0.50162	90.007	89.611	90.113	0.45058	-0.10263	-0.0001472	NaN	45.952	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128100			67009	5957	44539	44558				102			0.048607071996229934
YTDIVKMLL	9	Oxidation (M)	_YTDIVKM(Oxidation (M))LL_					0	0	1		ENSG00000164331|ENST00000296785|ANKRA2	ENSG00000164331|ENST00000296785|ANKRA2	ENSG00000164331|ENST00000296785|ANKRA2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	556.307018	1110.59948	-1.5187	-0.00084484	3.5725	0.0019874	2.0538	0.0011426	556.3089895603993	89.656	0.49973	90.127	89.681	90.18	0.47068	0.017874	0.0033476	NaN	45.952	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	294310			67010	5957	44539	44558				102			0.048607071996229934
YTDKIDRY	8	Unmodified	_YTDKIDRY_					0	0	0		ENST00000494815.1_1_11:864058-865677:+|nuORF;ENSG00000214063|ENST00000397397|TSPAN4;ENST00000468468.5_1_11:864058-866627:+|nuORF	ENST00000494815.1_1_11:864058-865677:+|nuORF	ENST00000494815.1_1_11:864058-865677:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	537.2664794921875	2	537.266739	1072.51892	0.11757	6.3164E-05	-0.31128	-0.00016724	-0.19371	-0.00010408	537.2664714658966	31.829	0.66216	31.84	31.579	32.241	0.0109					31	17	3	0	0	0	0.85264	1	1747	1747		59.931	19.358	1	177490			67011	8615	44540	44559	76247	76247					-0.014434377990482972
YTDKIDRY	8	Unmodified	_YTDKIDRY_					0	0	0		ENST00000494815.1_1_11:864058-865677:+|nuORF;ENSG00000214063|ENST00000397397|TSPAN4;ENST00000468468.5_1_11:864058-866627:+|nuORF	ENST00000494815.1_1_11:864058-865677:+|nuORF	ENST00000494815.1_1_11:864058-865677:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	537.266357421875	2	537.266739	1072.51892	0.48518	0.00026067	-0.28408	-0.00015263	0.2011	0.00010804	537.2665028595643	32.022	1.0249	31.971	31.604	32.629	-0.051033					39	22	3	0	0	0	0.91982	1	1846	1846		45.972	10.82	1	176940			67012	8615	44540	44559	76248	76248					-0.014434377990482972
YTDSYTDTY	9	Unmodified	_YTDSYTDTY_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	564.7229614257812	2	564.722027	1127.4295	-1.1628	-0.00065667	1.4762	0.00083362	0.31334	0.00017695	564.7227600782617	51.055	0.56097	51.053	50.79	51.351	-0.0020447					38	16	3	0	0	0	0.0039032	4	4343	4332;4343;4354;4365		138.24	44.236	1	346210			67013	5511	44541	44560	76249;76250;76251;76252	76250					-0.12911737269087098
YTDSYTDTY	9	Unmodified	_YTDSYTDTY_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	564.7232055664062	2	564.722027	1127.4295	-0.46674	-0.00026358	0.52671	0.00029744	0.059964	3.3863E-05	564.7221861505236	51.038	0.63531	51.014	50.77	51.405	-0.023426					45	19	3	0	0	0	0.015327	3	4438	4438;4453;4465		128.86	18.576	1	370200			67014	5511	44541	44560	76253;76254;76255	76253					-0.12911737269087098
YTDSYTDTY	9	Unmodified	_YTDSYTDTY_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	564.722900390625	2	564.722027	1127.4295	0.53263	0.00030079	-0.25518	-0.0001441	0.27745	0.00015668	564.7218015154674	51.077	0.66776	51.085	50.843	51.511	0.0077477					50	19	4	0	0	0	0.021087	4	4374	4374;4383;4396;4408		124.59	41.17	1	407440			67015	5511	44541	44560	76256;76257;76258;76259	76256					-0.12911737269087098
YTDSYTDTY	9	Unmodified	_YTDSYTDTY_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	565.2236938476562	2	564.722027	1127.4295	0.36992	0.0002089	-0.28802	-0.00016265	0.081898	4.6249E-05	564.7219030272195	51.148	0.9402	51.182	50.611	51.551	0.034584					57	27	4	0	0	0	0.034856	5	4042	4038;4042;4051;4064;4075		115.46	40.353	1	659470			67016	5511	44541	44560	76260;76261;76262;76263;76264	76261					-0.12911737269087098
YTDSYTDTY	9	Unmodified	_YTDSYTDTY_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	564.7235107421875	2	564.722027	1127.4295	0.419	0.00023662	-0.22668	-0.00012801	0.19231	0.0001086	564.7218178448626	51.165	0.7374	51.215	50.944	51.681	0.049896					49	20	4	0	0	0	0.062302	3	4050	4050;4062;4074		102.77	28.799	1	768760			67017	5511	44541	44560	76265;76266;76267	76265					-0.12911737269087098
YTDSYTDTY	9	Unmodified	_YTDSYTDTY_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	564.7227783203125	2	564.722027	1127.4295	-0.094544	-5.3391E-05	0.47371	0.00026751	0.37916	0.00021412	564.7220681548953	51.145	1.0891	51.06	50.458	51.547	-0.084538					49	29	3	0	0	0	0.026451	3	4071	4053;4071;4083		120.62	21.246	1	462480			67018	5511	44541	44560	76268;76269;76270	76269					-0.12911737269087098
YTDTYTEAY	9	Unmodified	_YTDTYTEAY_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	563.7338256835938	2	563.732394	1125.45024	0.43801	0.00024692	-0.42996	-0.00024238	0.0080527	4.5396E-06	563.7322235851162	53.306	0.46477	53.323	53.043	53.508	0.01749					23	13	2	0	0	0	0.72402	1	4685	4685		38.806	6.0556	1	80719			67019	5511	44542	44561	76271	76271					-0.10747146889411852
YTDTYTEAY	9	Unmodified	_YTDTYTEAY_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MATCH	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2		2	563.732394	1125.45024	-1.2201	-0.00068779	1.1777	0.00066391	-0.042356	-2.3878E-05	563.732497448871	53.322	0.36106	53.317	53.151	53.513	-0.0044556	-0.040072	0.0016088	NaN	38.806	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52039			67020	5511	44542	44561							-0.10747146889411852
YTDTYTEAY	9	Unmodified	_YTDTYTEAY_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	563.732394	1125.45024	0.35715	0.00020133	-0.21097	-0.00011893	0.14618	8.2404E-05	563.7320142936089	53.433	0.43349	53.481	53.203	53.637	0.047802	0.12335	4.3066E-05	NaN	38.806	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	152120			67021	5511	44542	44561							-0.10747146889411852
YTDTYTEAY	9	Unmodified	_YTDTYTEAY_					0	0	0		nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-7|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-6|SON	nc|ENSG00000159140|P18583-2|SON	nc|ENSG00000159140|P18583-2|SON	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	563.732394	1125.45024	-0.17419	-9.8196E-05	-0.06021	-3.3942E-05	-0.2344	-0.00013214	563.7323185424424	53.335	0.3501	53.273	53.049	53.399	-0.062065	-0.084523	0.00021304	NaN	38.806	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119660			67022	5511	44542	44561							-0.10747146889411852
YTDVPFHNQY	10	Unmodified	_YTDVPFHNQY_					0	0	0		ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	642.2877807617188	2	642.288202	1282.56185	0.027829	1.7874E-05	0.037014	2.3774E-05	0.064843	4.1648E-05	642.2881398920545	53.127	0.68515	53.124	52.744	53.43	-0.0033035					43	19	3	0	0	0	0.0418	5	4628	4608;4621;4628;4638;4645		110.12	51.874	1	407340			67023	2184	44543	44562	76272;76273;76274;76275;76276	76274					-0.06812667741610312
YTDVPFHNQY	10	Unmodified	_YTDVPFHNQY_					0	0	0		ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	642.288818359375	2	642.288202	1282.56185	-0.74239	-0.00047683	0.76964	0.00049433	0.027255	1.7506E-05	642.2885637692075	53.016	0.81486	52.992	52.702	53.517	-0.023849					50	20	4	0	0	0	0.023513	3	4719	4709;4719;4730		118.74	57.264	1	445480			67024	2184	44543	44562	76277;76278;76279	76278					-0.06812667741610312
YTDVPFHNQY	10	Unmodified	_YTDVPFHNQY_					0	0	0		ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.288330078125	2	642.288202	1282.56185	0.71427	0.00045877	-0.80904	-0.00051964	-0.094772	-6.0871E-05	642.2875210085433	53.077	0.69441	53.094	52.753	53.448	0.01749					55	19	4	0	0	0	0.062066	6	4644	4629;4636;4644;4655;4663;4684		107.01	62.348	1	363290			67025	2184	44543	44562	76280;76281;76282;76283;76284;76285	76282					-0.06812667741610312
YTDVPFHNQY	10	Unmodified	_YTDVPFHNQY_					0	0	0		ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	642.28759765625	2	642.288202	1282.56185	1.5161	0.0009738	-1.5739	-0.0010109	-0.05779	-3.7118E-05	642.2870576046213	53.119	0.73224	53.167	52.82	53.552	0.047802					63	28	3	0	0	0	0.062066	5	4317	4308;4317;4326;4334;4342		107.01	34.128	1	487470			67026	2184	44543	44562	76286;76287;76288;76289;76290	76287					-0.06812667741610312
YTDVPFHNQY	10	Unmodified	_YTDVPFHNQY_					0	0	0		ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	642.2880859375	2	642.288202	1282.56185	0.51173	0.00032868	-0.79739	-0.00051216	-0.28566	-0.00018348	642.2875123462406	53.082	0.63002	53.153	52.885	53.515	0.070713					47	18	3	0	0	0	0.0085745	5	4305	4299;4305;4316;4326;4338		132.76	71.067	1	518230			67027	2184	44543	44562	76291;76292;76293;76294;76295	76292					-0.06812667741610312
YTDVPFHNQY	10	Unmodified	_YTDVPFHNQY_					0	0	0		ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	642.2867431640625	2	642.288202	1282.56185	0.088527	5.686E-05	-0.19482	-0.00012513	-0.10629	-6.8269E-05	642.288032955426	53.074	0.61929	53.006	52.774	53.393	-0.068554					42	17	3	0	0	0	0.21786	4	4320	4310;4320;4330;4340		82.241	29.304	1	440380			67028	2184	44543	44562	76296;76297;76298;76299	76297					-0.06812667741610312
YTDVPFHNQY	10	Unmodified	_YTDVPFHNQY_					0	0	0		ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	642.288202	1282.56185	-0.24884	-0.00015982	0.94796	0.00060886	0.69913	0.00044904	642.2887285704179	52.345	0.37434	52.768	52.638	53.012	0.42348	-0.24707	0.0016939	NaN	132.76	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	646500			67029	2184	44543	44562							-0.06812667741610312
YTDVPFHNQY	10	Unmodified	_YTDVPFHNQY_					0	0	0		ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	642.288202	1282.56185	1.6419	0.0010546	-1.3813	-0.0008872	0.26062	0.00016739	642.2877646295312	52.152	0.36613	52.82	52.596	52.963	0.66729	-0.19565	-0.0012982	NaN	132.76	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	753550			67030	2184	44543	44562							-0.06812667741610312
YTEDAAHK	8	Unmodified	_YTEDAAHK_					0	0	0		ENST00000406875.7_1_7:139257479-139257596:-|nuORF	ENST00000406875.7_1_7:139257479-139257596:-|nuORF	ENST00000406875.7_1_7:139257479-139257596:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	467.71954345703125	2	467.716882	933.41921	-1.0273	-0.00048048	-1.8687	-0.00087402	-2.896	-0.0013545	467.71588340650413	72.084	0.79173	72.215	71.826	72.618	0.13146					44	28	3	0	0	0	0.85277	1	6625	6625		25.45	1.2474	1	138750			67031	11279	44544	44563	76300	76300					-0.05016255413011095
YTEKRKYHSK	10	Unmodified	_YTEKRKYHSK_					0	0	0		ENSG00000243244|ENST00000404752|STON1;nc|ENSG00000243244|Q9Y6Q2-3|STON1;nc|ENSG00000243244|Q9Y6Q2-2|STON1;ENSG00000068781|ENST00000394754|STON1-GTF2A1L	ENSG00000243244|ENST00000404752|STON1	ENSG00000243244|ENST00000404752|STON1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	447.2730712890625	3	447.242088	1338.70443	0.74969	0.00033529	-1.8921	-0.00084624	-1.1424	-0.00051095	447.57564348707285	106.88	0.25191	106.97	106.82	107.07	0.091255					9	5	2	0	0	0	0.37624	1	11434	11434		6.001	0	1	51532			67032	1206	44545	44564	76301	76301					0.04862964720405216
YTEPLGGL	8	Unmodified	_YTEPLGGL_					0	0	0		ENST00000525127.1_1_11:66108392-66109705:-|nuORF;ENST00000534617.5_1_11:66108392-66109705:-|nuORF;ENSG00000174744|ENST00000359957|BRMS1;ENST00000530238.5_1_11:66105966-66109705:-|nuORF	ENST00000525127.1_1_11:66108392-66109705:-|nuORF	ENST00000525127.1_1_11:66108392-66109705:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	425.2220764160156	2	425.221268	848.427984	-1.8629	-0.00079212	3.0548	0.0012989	1.1919	0.00050682	425.2224549524542	88.246	1.2975	88.415	87.955	89.252	0.16923					79	30	4	0	0	0	0.82464	1	8706	8706		21.702	1.2205	1	953360			67033	6960	44546	44565	76302	76302					-0.0022928177650101134
YTEQMNMA	8	Unmodified	_YTEQMNMA_					0	0	0			REV__ENST00000473417.5_1_3:125188296-125239016:-|nuORF	REV__ENST00000473417.5_1_3:125188296-125239016:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	494.30084228515625	2	494.199153	986.383753	-0.69043	-0.00034121	3.2828	0.0016223	2.5923	0.0012811	494.20176345407265	97.468	0.16523	97.516	97.414	97.579	0.048157					5	3	2	0	0	0	0.4196	1	10372	10372		25.45	7.1258	1	45281	+		67034	18051	44547	44566	76303	76303					-0.109983772566693
YTERKIRKWNV	11	Unmodified	_YTERKIRKWNV_					0	0	0			REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	REV__nc|ENSG00000136153|Q8WWI1-4|LMO7	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	498.28314208984375	3	498.284287	1491.83103	-0.64576	-0.00032177	-1.8538	-0.0009237	-2.4995	-0.0012455	498.28330584065924	33.322	0.54781	33.368	33.139	33.687	0.045853					57	23	4	0	0	0	0.75121	1	1595	1595		21.78	10.326	1	213640	+		67035	29869	44548	44567	76304	76304					0.10478890945569219
YTESEKIIK	9	Unmodified	_YTESEKIIK_					0	0	0		ENST00000262150.6_1_18:64239265-64271331:-|nuORF	ENST00000262150.6_1_18:64239265-64271331:-|nuORF	ENST00000262150.6_1_18:64239265-64271331:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	555.8062133789062	2	555.805697	1109.59684	-0.44432	-0.00024695	1.2036	0.00066899	0.75932	0.00042203	555.8063523892554	59.451	1.0465	59.483	59.019	60.065	0.032825					57	25	3	0	0	0	0.18601	1	5507	5507		76.774	2.7994	1	387260			67036	9431	44549	44568	76305	76305					0.04642575066327481
YTETKIKKLA	10	Unmodified	_YTETKIKKLA_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.8562622070312	2	597.858264	1193.70197	-0.56163	-0.00033577	-2.7129	-0.0016219	-3.2745	-0.0019577	597.8563747061196	94.399	5.7127	94.467	93.497	99.21	0.068344					333	133	4	0	0	0	0.86348	1	9990	9990		31.53	2.3598	1	6282800	+		67037	16566	44550	44569	76306	76306					0.11287116262769814
YTETKIKKLA	10	Unmodified	_YTETKIKKLA_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	597.856689453125	2	597.858264	1193.70197	-0.43133	-0.00025788	-2.8188	-0.0016852	-3.2501	-0.0019431	597.8563537182641	94.207	5.6542	94.253	93.24	98.894	0.046173					357	132	4	0	0	0	0.86218	2	10104	10000;10104		32.812	7.2384	1	6857100	+		67038	16566	44550	44569	76307;76308	76308					0.11287116262769814
YTETKIKKLA	10	Unmodified	_YTETKIKKLA_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	597.8557739257812	2	597.858264	1193.70197	0.93581	0.00055948	-4.3695	-0.0026123	-3.4337	-0.0020529	597.8554384212597	92.104	2.8393	92.325	90.514	93.354	0.22157					219	68	5	0	0	0	0.8608	1	9451	9451		34.173	0.25091	1	2638300	+		67039	16566	44550	44569	76309	76309					0.11287116262769814
YTETKIKKLA	10	Unmodified	_YTETKIKKLA_					0	0	0			REV__ENSG00000068784|ENST00000263736|SRBD1	REV__ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	597.85595703125	2	597.858264	1193.70197	-1.2962	-0.00077492	-1.6524	-0.0009879	-2.9486	-0.0017628	598.3589924641743	94.317	5.5544	94.515	93.356	98.911	0.19827					368	130	4	0	0	0	0.80179	1	9664	9664		39.253	0	1	9481100	+		67040	16566	44550	44569	76310	76310					0.11287116262769814
YTFLLVRSVVA	11	Unmodified	_YTFLLVRSVVA_					0	0	0			REV__ENST00000532486.5_1_8:144774355-144776697:+|nuORF	REV__ENST00000532486.5_1_8:144774355-144776697:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	634.3765869140625	2	634.374081	1266.73361	1.3188	0.00083664	3.8961	0.0024716	5.215	0.0033083	634.3758711255293	112.87	7.3185	112.9	112.71	120.03	0.028854					742	248	3	0	0	0	0.7342	1	12644	12644		25.574	2.0514	1	12917000	+		67041	28326	44551	44570	76311	76311					0.11091109016706469
YTFTASFTR	9	Unmodified	_YTFTASFTR_					0	0	0		ENSG00000204613|ENST00000449742|TRIM10	ENSG00000204613|ENST00000449742|TRIM10	ENSG00000204613|ENST00000449742|TRIM10	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	547.7708129882812	2	547.269281	1092.52401	0.0070957	3.8832E-06	-0.3264	-0.00017863	-0.31931	-0.00017475	547.2689576624413	50.254	1.7099	50.231	49.856	51.566	-0.02343					106	46	5	0	0	0	0.6204	1	4311	4311		45.972	1.5951	1	2856300			67042	8467	44552	44571	76312	76312					-0.018551339364421437
YTGPKVAAH	9	Unmodified	_YTGPKVAAH_					0	0	0			REV__ENSG00000215182|ENST00000621226|MUC5AC	REV__ENSG00000215182|ENST00000621226|MUC5AC	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	472.28741455078125	2	472.253434	942.492316	2.0083	0.00094841	2.3974	0.0011322	4.4056	0.0020806	472.25491476641605	95.344	0.28453	95.286	95.226	95.51	-0.057526					10	6	3	0	0	0	0.20789	1	10192	10192		30.504	0	1	295640	+		67043	23677	44553	44572	76313	76313					0.018769181002653568
YTGTGVRLFL	10	Unmodified	_YTGTGVRLFL_					0	0	0			REV__L1ME3_dup5470|chr10:45638510-45639488:+|1.2050220498951432|0.3685433200758222|1.71|63.0|15|2|sense	REV__L1ME3_dup5470|chr10:45638510-45639488:+|1.2050220498951432|0.3685433200758222|1.71|63.0|15|2|sense	MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	563.8162841796875	2	563.816399	1125.61824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.58	1	55.643	55.143	56.143	0.063725								0	0	0	0.45132	1	4660	4660		34.173	0.65696	1		+		67044	29535	44554	44573	76314	76314					0.060460048857066795
YTHCAGQHSH	10	Carbamidomethyl (C)	_YTHC(Carbamidomethyl (C))AGQHSH_	YTHC(1)AGQHSH		YTHC(48)AGQHSH		0	1	0			REV__ENST00000443967.5_1_5:175717389-175717593:+|nuORF	REV__ENST00000443967.5_1_5:175717389-175717593:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	599.2447509765625	2	599.246346	1196.47814	0.20245	0.00012132	-4.4099	-0.0026426	-4.2075	-0.0025213	599.2435429697074	27.455	0.50826	27.416	27.165	27.673	-0.038523					18	11	2	0	0	0	0.63899	1	1318	1318		47.96	16.43	1	37161	+		67045	26781	44555	44574	76315	76315	329				-0.11224102390315238
YTHLQILLRRE	11	Unmodified	_YTHLQILLRRE_					0	0	0			REV__chr16:89866-92596|29|16.34|0.48|5.08|-|0|None,NPRL3|1	REV__chr16:89866-92596|29|16.34|0.48|5.08|-|0|None,NPRL3|1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	481.28350830078125	3	481.280654	1440.82013	2.8229	0.0013586	4.1588	0.0020016	6.9817	0.0033602	481.2820387831268	102.84	2.0906	102.8	102.18	104.27	-0.047005					125	50	4	0	0	0	0.74771	1	11267	11267		22.562	3.2989	1	829310	+		67046	15646	44556	44575	76316	76316					0.11735488571252972
YTHQLKKA	8	Unmodified	_YTHQLKKA_					0	0	0			REV__nc|ENSG859|P60507|ERVFC1	REV__nc|ENSG859|P60507|ERVFC1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	494.7792663574219	2	494.782359	987.550165	-1.0197	-0.00050453	-3.2191	-0.0015927	-4.2388	-0.0020973	494.78063343938777	84.197	2.1372	84.197	83.134	85.271	0					93	51	2	0	0	0	0.87064	1	7897	7897		29.15	1.2673	1	184680	+		67047	30320	44557	44576	76317	76317					0.0558918002569726
YTHRGMMDY	9	Unmodified	_YTHRGMMDY_					0	0	0			REV__nc|ENSG00000115041|Q9Y2W7-3|KCNIP3	REV__nc|ENSG00000115041|Q9Y2W7-3|KCNIP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	587.7454833984375	2	587.244426	1172.4743	-0.66577	-0.00039097	3.4465	0.0020239	2.7807	0.0016329	587.2463764735331	54.108	2.7006	54.103	53.244	55.944	-0.0053711					193	79	5	0	0	0	0.67345	1	4926	4926		42.396	1.618	1	4697700	+		67048	18081	44558	44577	76318	76318					-0.10503908208374924
YTHRGMMDY	9	Unmodified	_YTHRGMMDY_					0	0	0			REV__nc|ENSG00000115041|Q9Y2W7-3|KCNIP3	REV__nc|ENSG00000115041|Q9Y2W7-3|KCNIP3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	587.2470703125	2	587.244426	1172.4743	-1.47	-0.00086323	4.1788	0.002454	2.7088	0.0015908	587.2467821876162	54.103	2.483	54.126	53.539	56.022	0.022537					156	69	5	0	0	0	0.47272	1	4882	4882		53.351	3.3269	1	5510700	+		67049	18081	44558	44577	76319	76319					-0.10503908208374924
YTHTTCSS	8	Unmodified	_YTHTTCSS_					0	0	0			REV__ENST00000319170.9_1_2:204305150-204305717:-|nuORF	REV__ENST00000319170.9_1_2:204305150-204305717:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	450.2742004394531	2	450.181817	898.349082	-1.7766	-0.00079979	3.0023	0.0013516	1.2257	0.00055178	450.18289937391063	92.895	0.40761	93.088	93.026	93.434	0.19239					10	9	2	0	0	0	0.4196	1	9405	9405		42.474	3.6683	1	49338	+		67050	24982	44559	44578	76320	76320					-0.10415877073114643
YTIAKKDKLGA	11	Unmodified	_YTIAKKDKLGA_					0	0	0			REV__nc|ENSG00000129317|Q9H0K6-2|PUS7L	REV__nc|ENSG00000129317|Q9H0K6-2|PUS7L	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	604.353271484375	2	604.355888	1206.69722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.15	1	82.296	81.796	82.796	0.1455								0	0	0	0.56276	1	7903	7903		47.228	18.058	1		+		67051	18818	44560	44579	76321	76321					0.10214232119983535
YTIIQVMAGVI	11	Unmodified	_YTIIQVMAGVI_					0	0	0			REV__nc|ENSG00000005381|P05164-2|MPO	REV__nc|ENSG00000005381|P05164-2|MPO	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	605.3377685546875	2	604.341392	1206.66823	-0.0026405	-1.5958E-06	3.8803	0.0023451	3.8777	0.0023435	604.3431392137792	63.65	0.30116	64.036	63.79	64.091	0.3868					10	6	2	0	0	0	0.17551	1	6828	6828		45.972	6.7194	1	115580	+		67052	16085	44561	44580	76322	76322					0.07316371499359775
YTIIQVMAGVI	11	Unmodified	_YTIIQVMAGVI_					0	0	0			REV__nc|ENSG00000005381|P05164-2|MPO	REV__nc|ENSG00000005381|P05164-2|MPO	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	604.341392	1206.66823	0.22523	0.00013611	9.6204	0.005814	9.8456	0.0059501	604.3457707583581	63.542	0.45975	64.097	63.84	64.3	0.55449	0.030154	0.0066852	NaN	45.972	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65916	+		67053	16085	44561	44580							0.07316371499359775
YTILLDLRN	9	Unmodified	_YTILLDLRN_					0	0	0			REV__ENST00000471383.5_1_2:202131194-202137540:+|nuORF	REV__ENST00000471383.5_1_2:202131194-202137540:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	560.8202514648438	2	560.821681	1119.62881	-1.4169	-0.00079462	-1.874	-0.001051	-3.2909	-0.0018456	560.820565041156	92.347	2.8673	92.533	91.242	94.11	0.18582					198	67	4	0	0	0	0.78983	1	9233	9233		27.882	0	1	758020	+		67054	16473	44562	44581	76323	76323					0.07377987540144204
YTILTSSA	8	Unmodified	_YTILTSSA_					0	0	0		nc|ENSG00000176748|P0C646|OR52Z1P	nc|ENSG00000176748|P0C646|OR52Z1P	nc|ENSG00000176748|P0C646|OR52Z1P	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	428.26141357421875	2	428.226551	854.438549	0.64309	0.00027539	-1.2785	-0.0005475	-0.63545	-0.00027212	428.2260731043537	90.782	0.35861	90.936	90.597	90.956	0.15388					14	8	2	0	0	0	0.4196	1	9079	9079		33.516	6.7195	1	102700			67055	15114	44563	44582	76324	76324					0.0055070087789772515
YTILTSSA	8	Unmodified	_YTILTSSA_					0	0	0		nc|ENSG00000176748|P0C646|OR52Z1P	nc|ENSG00000176748|P0C646|OR52Z1P	nc|ENSG00000176748|P0C646|OR52Z1P	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	428.261474609375	2	428.226551	854.438549	-1.8499	-0.00079217	2.2665	0.0009706	0.41667	0.00017843	428.22788050757345	90.524	1.0348	90.704	90.003	91.038	0.18029					38	24	3	0	0	0	0.4196	1	9033	9033		40.573	13.777	1	75636			67056	15114	44563	44582	76325	76325					0.0055070087789772515
YTKAILLNEL	10	Unmodified	_YTKAILLNEL_					0	0	0			REV__ENST00000463418.5_1_2:158157328-158158798:+|nuORF	REV__ENST00000463418.5_1_2:158157328-158158798:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	589.3426513671875	2	589.344989	1176.67542	0.83312	0.00049099	-4.3931	-0.002589	-3.5599	-0.002098	589.3422317284717	94.108	6.9336	94.269	93.283	100.22	0.16118					485	163	5	0	0	0	0.86587	1	10031	10031		29.17	1.0886	1	20363000	+		67057	27073	44564	44583	76326	76326					0.09415427371436635
YTKEIIVLTK	10	Unmodified	_YTKEIIVLTK_					0	0	0			REV__nc|ENSG00000166889|Q86TB9-2|PATL1	REV__nc|ENSG00000166889|Q86TB9-2|PATL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	604.366455078125	2	604.368464	1206.72238	1.0484	0.00063359	-4.3277	-0.0026155	-3.2793	-0.0019819	604.3657715492872	104.36	3.6239	104.53	103.81	107.43	0.17096					427	90	7	0	0	0	0.86471	2	11446	11421;11446		30.318	1.1477	1	105850000	+		67058	21335	44565	44584	76327;76328	76328					0.12728286922538246
YTKIVVKG	8	Unmodified	_YTKIVVKG_					0	0	0		ENSG00000141252|ENST00000437048|VPS53;ENST00000541903.6_1_17:422370-426182:-|nuORF	ENSG00000141252|ENST00000437048|VPS53	ENSG00000141252|ENST00000437048|VPS53	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	454.24310302734375	2	454.284203	906.553853	0.6028	0.00027384	3.9766	0.0018065	4.5794	0.0020804	454.28535349354667	83.537	1.5478	83.684	82.882	84.43	0.14694					54	35	2	0	0	0	0.4196	1	8018	8018		19.36	0	1	39457			67059	4484	44566	44585	76329	76329					0.09683849799580457
YTKKGRVIFI	10	Unmodified	_YTKKGRVIFI_					0	0	0		ENST00000527449.1_1_14:73574437-73577964:+|nuORF	ENST00000527449.1_1_14:73574437-73577964:+|nuORF	ENST00000527449.1_1_14:73574437-73577964:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	613.385009765625	2	612.876791	1223.73903	0.91302	0.00055957	3.4829	0.0021346	4.3959	0.0026941	612.8787003590065	104.47	3.5452	104.58	103.94	107.49	0.11684					293	87	6	0	0	0	0.8608	1	11263	11263		34.173	1.3601	1	81912000			67060	13287	44567	44586	76330	76330					0.1361083259919269
YTKKRGQRP	9	Unmodified	_YTKKRGQRP_					0	0	0		ENST00000467099.6_1_17:18003545-18010551:+|nuORF;ENSG00000108591|ENST00000225729|DRG2	ENST00000467099.6_1_17:18003545-18010551:+|nuORF	ENST00000467099.6_1_17:18003545-18010551:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3292236328125	2	567.330539	1132.64652	1.8589	0.0010546	-3.1789	-0.0018035	-1.32	-0.00074889	567.3286317846034	92.542	7.1734	92.478	91.239	98.412	-0.06414					581	169	6	0	0	0	0.78983	1	10115	10115		27.882	1.1893	1	15439000			67061	12144	44568	44587	76331	76331					0.0855074758567298
YTKKRGQRP	9	Unmodified	_YTKKRGQRP_					0	0	0		ENST00000467099.6_1_17:18003545-18010551:+|nuORF;ENSG00000108591|ENST00000225729|DRG2	ENST00000467099.6_1_17:18003545-18010551:+|nuORF	ENST00000467099.6_1_17:18003545-18010551:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	567.3292846679688	2	567.330539	1132.64652	1.497	0.00084932	-2.8559	-0.0016202	-1.3589	-0.00077092	567.328827072325	92.392	5.8574	92.437	91.141	96.999	0.045456					496	138	6	0	0	0	0.64922	1	9959	9959		44.117	8.4985	1	15259000			67062	12144	44568	44587	76332	76332					0.0855074758567298
YTKLIRGVFVN	11	Unmodified	_YTKLIRGVFVN_					0	0	0		ENSG00000090989|ENST00000381295|EXOC1;nc|ENSG00000090989|Q9NV70-2|EXOC1;ENST00000511971.5_1_4:56749994-56766742:+|nuORF	ENSG00000090989|ENST00000381295|EXOC1	ENSG00000090989|ENST00000381295|EXOC1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2564392089844	3	437.259079	1308.75541	-1.8163	-0.00079418	-2.1335	-0.00093288	-3.9497	-0.0017271	437.2580894693445	99.183	2.5872	99.369	98.322	100.91	0.18581					159	59	3	0	0	0	0.72374	2	10245	10245;10292		27.644	3.9473	1	447430			67063	1662	44569	44588	76333;76334	76333					0.1133791376530553
YTKPNGDKELS	11	Unmodified	_YTKPNGDKELS_					0	0	0		ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-4|OGA;nc|ENSG00000198408|O60502-2|OGA	ENSG00000198408|ENST00000361464|OGA	ENSG00000198408|ENST00000361464|OGA	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	626.37939453125	2	626.314417	1250.61428	-0.054106	-3.3887E-05	0.56612	0.00035457	0.51201	0.00032068	626.314964245187	106	0.84834	106	105.68	106.53	0					21	19	2	0	0	0	0.17415	1	10939	10939		33.922	1.1092	1	177320			67064	8270	44570	44589	76335	76335					-0.0010012939865191584
YTKVPGQAIL	10	Unmodified	_YTKVPGQAIL_					0	0	0			REV__nc|ENSG00000116748|P23109-2|AMPD1	REV__nc|ENSG00000116748|P23109-2|AMPD1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3158569335938	2	545.318774	1088.623	-0.53242	-0.00029034	-3.3466	-0.0018249	-3.879	-0.0021153	545.3168302794771	93.277	0.88976	93.727	93.4	94.289	0.44988					49	20	3	0	0	0	0.82886	1	11191	11191		37.812	0	1	539260	+		67065	18221	44571	44590	76336	76336					0.08222889028479585
YTLCTKLFLI	10	Unmodified	_YTLCTKLFLI_					0	0	0		ENST00000561424.5_1_15:45009826-45011035:+|nuORF	ENST00000561424.5_1_15:45009826-45011035:+|nuORF	ENST00000561424.5_1_15:45009826-45011035:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	405.5643310546875	3	405.566632	1213.67807	-0.18903	-7.6663E-05	-4.4358	-0.001799	-4.6249	-0.0018757	405.56470246140424	60.148	1.7799	60.134	59.159	60.939	-0.013729					123	48	3	0	0	0	0.85633	1	5502	5502		21.686	2.7194	1	242840			67066	13835	44572	44591	76337	76337					0.0797755950472947
YTLIDVKGSVI	11	Unmodified	_YTLIDVKGSVI_					0	0	0			REV__nc|ENSG00000134333|P00338-4|LDHA	REV__nc|ENSG00000134333|P00338-4|LDHA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	403.2467956542969	3	403.23594	1206.68599	-0.18595	-7.4981E-05	-4.1393	-0.0016691	-4.3253	-0.0017441	403.2344935329799	104.67	1.0907	104.66	103.98	105.07	-0.014809					32	25	2	0	0	0	0.1747	1	11344	11344		27.644	0.59661	1	167120	+		67067	29858	44573	44592	76338	76338					0.09091410025871483
YTLKKTLEVL	10	Unmodified	_YTLKKTLEVL_					0	0	0			REV__ENSG00000163312|ENST00000295488|HELQ	REV__ENSG00000163312|ENST00000295488|HELQ	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	604.3668823242188	2	604.368464	1206.72238	-0.16845	-0.00010181	-2.2681	-0.0013707	-2.4365	-0.0014726	604.3669303033663	107.81	0.85171	107.81	107.02	107.87	0					52	20	4	0	0	0	0.86587	1	11195	11195		29.17	8.2231	1	11686000	+		67068	20896	44574	44593	76339	76339					0.12728286922560983
YTLLIVSS	8	Unmodified	_YTLLIVSS_					0	0	0			REV__ENSG00000110628|ENST00000649076|SLC22A18	REV__ENSG00000110628|ENST00000649076|SLC22A18	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	448.2588806152344	2	448.260394	894.506234	1.081	0.00048457	-3.9754	-0.001782	-2.8944	-0.0012974	448.25853095851693	87.475	2.8215	87.401	86.397	89.218	-0.074005					99	66	2	0	0	0	0.884	1	9062	9062		33.516	9.3128	1	324070	+		67069	17822	44575	44594	76340	76340					0.05476150808726743
YTLLTAAS	8	Unmodified	_YTLLTAAS_					0	0	0			REV__nc|ENSG00000112414|Q86SQ4-2|ADGRG6	REV__nc|ENSG00000112414|Q86SQ4-2|ADGRG6	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	420.22747802734375	2	420.229094	838.443634	-1.5729	-0.000661	-1.3827	-0.00058106	-2.9557	-0.0012421	420.2284217500369	79.028	6.4625	79.123	77.107	83.569	0.094803					372	199	3	0	0	0	0.90465	1	7481	7481		40.573	4.9543	1	634680	+		67070	17945	44576	44595	76341	76341					0.017950047405179248
YTLLTVQLF	9	Unmodified	_YTLLTVQLF_					0	0	0			REV__ENSG00000204687|ENST00000377127|MAS1L	REV__ENSG00000204687|ENST00000377127|MAS1L	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	549.3187866210938	2	549.3157	1096.61685	0.85079	0.00046735	2.6536	0.0014577	3.5044	0.001925	549.3171144027727	100.89	2.3983	101.04	100.55	102.95	0.14352					146	58	4	0	0	0	0.78983	1	10688	10688		27.882	0	1	2023500	+		67071	23516	44577	44596	76342	76342					0.07240370796921525
YTLPAAVD	8	Unmodified	_YTLPAAVD_					0	0	0		nc|ENSG00000102290|Q9BZA7-7|PCDH11X;ENSG00000099715|ENST00000698851|PCDH11Y;nc|ENSG00000099715|Q9BZA8|PCDH11Y;nc|ENSG00000102290|Q9BZA7-8|PCDH11X;chrX:92387933-92618264|17|10.29|0.21|5.6|+|ENST00000406881|PCDH11X,PCDH11X;nc|ENSG00000102290|Q9BZA7-3|PCDH11X;nc|ENSG00000102290|Q9BZA7-4|PCDH11X;nc|ENSG00000102290|Q9BZA7-5|PCDH11X;nc|ENSG00000102290|Q9BZA7-6|PCDH11X;nc|ENSG00000102290|Q9BZA7-2|PCDH11X;chrX:91836044-91876781|14|26.86|0.31|6.45|+|ENST00000504220|PCDH11X,PCDH11X;chrX:91879273-92201375|15|14.67|0.42|5.12|+|ENST00000504220|PCDH11X,PCDH11X;nc|ENSG00000099715|Q9BZA8-4|PCDH11Y;nc|ENSG00000099715|Q9BZA8-2|PCDH11Y;nc|ENSG00000099715|Q9BZA8-3|PCDH11Y;ENST00000361724.3_1_X:91090458-91134302:+|nuORF;ENSG00000102290|ENST00000682573|PCDH11X	nc|ENSG00000102290|Q9BZA7-7|PCDH11X	nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	425.221923828125	2	425.221268	848.427984	2.7046	0.0011501	-1.4928	-0.00063477	1.2118	0.00051528	425.22052081582814	88.286	1.4528	88.336	87.945	89.398	0.050415					74	34	3	0	0	0	0.85277	1	9051	9051		25.45	0	1	1023100			67072	555	44578	44597	76343	76343					-0.002292817765237487
YTLPSAIL	8	Unmodified	_YTLPSAIL_					0	0	0		ENST00000570019.1_1_15:34666200-34666557:-|nuORF	ENST00000570019.1_1_15:34666200-34666557:-|nuORF	ENST00000570019.1_1_15:34666200-34666557:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	439.2525329589844	2	439.255111	876.49567	-1.1349	-0.00049849	-4.2554	-0.0018692	-5.3902	-0.0023677	439.25333124331416	91.078	2.4612	91.078	90.52	92.981	0					97	57	3	0	0	0	0.86791	3	8900	8900;8913;8925		35.201	1.6851	1	1134200			67073	13990	44579	44598	76344;76345;76346	76344					0.05248168154275845
YTLRNREVKG	10	Unmodified	_YTLRNREVKG_					0	0	0		ENSG00000238243|ENST00000360358|OR2W3	ENSG00000238243|ENST00000360358|OR2W3	ENSG00000238243|ENST00000360358|OR2W3	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	618.3455810546875	2	618.346386	1234.67822	1.2492	0.00077242	-2.1265	-0.0013149	-0.8773	-0.00054247	618.344978551102	97.744	3.3917	97.971	96.779	100.17	0.22787					230	79	4	0	0	0	0.86218	1	10164	10164		32.812	0	1	960930			67074	8764	44580	44599	76347	76347					0.07026695548915995
YTLTAGLL	8	Unmodified	_YTLTAGLL_					0	0	0			REV__ENST00000473343.5_1_1:6521496-6523040:-|nuORF	REV__ENST00000473343.5_1_1:6521496-6523040:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	426.24591064453125	2	426.247286	850.48002	-1.1835	-0.00050446	-1.6997	-0.0007245	-2.8832	-0.001229	426.24646575286147	87.846	4.0837	87.846	85.783	89.866	0					184	94	2	0	0	0	0.86791	1	8454	8454		28.254	0	1	2605100	+		67075	23691	44581	44600	76348	76348					0.04879881637236849
YTLVFQPYA	9	Unmodified	_YTLVFQPYA_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	551.2872314453125	2	551.2844	1100.55425	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.68	1	103.94	103.44	104.44	0.26524								0	0	0	0.30613	1	12655	12655		42.396	1.618	1		+		67076	15493	44582	44601	76349	76349					0.007992247287802456
YTLVFRLKYLL	11	Unmodified	_YTLVFRLKYLL_					0	0	0			REV__ENSG00000197136|ENST00000355703|PCNX3	REV__ENSG00000197136|ENST00000355703|PCNX3	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	476.95684814453125	3	476.958629	1427.85406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.65	1	118.67	118.17	119.17	0.026466								0	0	0	0.56276	1	13057	13057		12.957	2.8536	1		+		67077	23201	44583	44602	76350	76350					0.1572451701031241
YTLVGSLPLL	10	Unmodified	_YTLVGSLPLL_					0	0	0		ENSG00000198886|ENST00000361381|MT-ND4	ENSG00000198886|ENST00000361381|MT-ND4	ENSG00000198886|ENST00000361381|MT-ND4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	538.3264770507812	2	538.323525	1074.6325	1.8602	0.0010014	4.4695	0.0024061	6.3297	0.0034074	538.3258030709807	100.65	2.5347	100.99	100.49	103.03	0.3459					235	64	6	0	0	0	0.85466	1	12389	12389		20.947	0	1	19391000			67078	8358	44584	44603	76351	76351					0.09816657314013355
YTLVRLGPFK	10	Unmodified	_YTLVRLGPFK_					0	0	0			REV__nc|ENSG00000184611|Q9NS40-2|KCNH7	REV__nc|ENSG00000184611|Q9NS40-2|KCNH7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	597.85546875	2	597.355691	1192.69683	-0.84393	-0.00050413	1.3726	0.00081991	0.52864	0.00031578	597.3571567062515	92.261	3.5826	92.723	90.636	94.218	0.46249					192	85	4	0	0	0	0.8608	1	11119	11119		34.173	8.7224	1	1407500	+		67079	22695	44585	44604	76352	76352					0.10818857190793096
YTLWALSLV	9	Unmodified	_YTLWALSLV_					0	0	0			REV__ENSG00000184210|ENST00000333026|DGAT2L6	REV__ENSG00000184210|ENST00000333026|DGAT2L6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	533.3164672851562	2	533.302593	1064.59063	0.076404	4.0746E-05	-1.8942	-0.0010102	-1.8178	-0.00096944	533.3001818003885	63.322	0.20528	63.876	63.755	63.961	0.5545					6	4	2	0	0	0	0.20789	1	6831	6831		23.042	0	1	50664	+		67080	22654	44586	44605	76353	76353					0.06092101625449686
YTLYILAS	8	Unmodified	_YTLYILAS_					0	0	0			REV__ENST00000265085.9_1_5:173383903-173384014:+|nuORF	REV__ENST00000265085.9_1_5:173383903-173384014:+|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	472.2876281738281	2	472.260394	942.506234	1.3915	0.00065717	2.4183	0.0011421	3.8099	0.0017993	472.2613562054131	94.908	0.20303	95.341	95.158	95.361	0.4324					5	4	2	0	0	0	0.4196	1	11320	11320		26.796	0	1	100370	+		67081	24488	44587	44606	76354	76354					0.032681508087193833
YTMKEVLFY	9	Unmodified	_YTMKEVLFY_					0	0	0		nc|ENSG00000135679|Q00987-7|MDM2;ENST00000493419.1_1_12:69202221-69210726:+|nuORF;nc|ENSG00000135679|Q00987-10|MDM2;nc|ENSG00000135679|Q00987|MDM2;ENSG00000135679|ENST00000258149|MDM2	nc|ENSG00000135679|Q00987-7|MDM2	nc|ENSG00000135679|Q00987-7|MDM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	597.299072265625	2	597.299193	1192.58383	-0.57062	-0.00034083	0.67317	0.00040208	0.10254	6.125E-05	597.2992190063586	72.429	0.45256	72.467	72.23	72.683	0.037148					39	18	3	0	0	0	0.19818	1	6899	6899		74.255	23.062	1	121810			67082	4044	44588	44607	76355	76355					-0.004755793174126666
YTMKEVLFY	9	Unmodified	_YTMKEVLFY_					0	0	0		nc|ENSG00000135679|Q00987-7|MDM2;ENST00000493419.1_1_12:69202221-69210726:+|nuORF;nc|ENSG00000135679|Q00987-10|MDM2;nc|ENSG00000135679|Q00987|MDM2;ENSG00000135679|ENST00000258149|MDM2	nc|ENSG00000135679|Q00987-7|MDM2	nc|ENSG00000135679|Q00987-7|MDM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	597.79931640625	2	597.299193	1192.58383	-0.12766	-7.6253E-05	0.057103	3.4108E-05	-0.07056	-4.2145E-05	597.2990016489515	72.288	0.55567	72.248	72.009	72.565	-0.04039					37	22	2	0	0	0	0.64555	1	7052	7052		44.377	0.26039	1	149060			67083	4044	44588	44607	76356	76356					-0.004755793174126666
YTMRILPSKL	10	Unmodified	_YTMRILPSKL_					0	0	0			REV__ENSG00000204022|ENST00000371939|LIPJ	REV__ENSG00000204022|ENST00000371939|LIPJ	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	611.3521118164062	2	611.354834	1220.69511	-0.25907	-0.00015838	2.238	0.0013682	1.9789	0.0012098	611.3560225745724	94.537	2.8976	94.537	92.503	95.401	0					245	67	4	0	0	0	0.86106	1	9272	9272		33.922	4.7516	1	3360200	+		67084	23453	44589	44608	76357	76357					0.09359480110538243
YTMRILPSKL	10	Unmodified	_YTMRILPSKL_					0	0	0			REV__ENSG00000204022|ENST00000371939|LIPJ	REV__ENSG00000204022|ENST00000371939|LIPJ	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	611.3529663085938	2	611.354834	1220.69511	0.21559	0.0001318	1.6628	0.0010166	1.8784	0.0011484	611.3556907503647	94.13	2.8914	94.176	92.155	95.046	0.045876					247	68	4	0	0	0	0.86348	1	9735	9735		31.53	2.3598	1	5379900	+		67085	23453	44589	44608	76358	76358					0.09359480110538243
YTMRILPSKL	10	Unmodified	_YTMRILPSKL_					0	0	0			REV__ENSG00000204022|ENST00000371939|LIPJ	REV__ENSG00000204022|ENST00000371939|LIPJ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	611.3543701171875	2	611.354834	1220.69511	0.85003	0.00051967	1.0308	0.00063016	1.8808	0.0011498	611.355308337489	93.931	2.9061	94.092	92.243	95.15	0.16118					263	69	4	0	0	0	0.86272	1	9435	9435		24.519	0	1	6836400	+		67086	23453	44589	44608	76359	76359					0.09359480110538243
YTMRILPSKL	10	Unmodified	_YTMRILPSKL_					0	0	0			REV__ENSG00000204022|ENST00000371939|LIPJ	REV__ENSG00000204022|ENST00000371939|LIPJ	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	611.3545532226562	2	611.354834	1220.69511	-1.2523	-0.00076561	3.1276	0.0019121	1.8753	0.0011465	611.3565792028379	93.93	2.9558	94.128	92.272	95.227	0.19827					256	70	4	0	0	0	0.8545	1	9390	9390		36.447	2.5251	1	5978100	+		67087	23453	44589	44608	76360	76360					0.09359480110538243
YTNIIRTIL	9	Unmodified	_YTNIIRTIL_					0	0	0		ENSG00000197706|ENST00000343399|OR6C74;ENSG00000187857|ENST00000641576|OR6C75	ENSG00000197706|ENST00000343399|OR6C74	ENSG00000197706|ENST00000343399|OR6C74	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8304443359375	2	553.832049	1105.64954	-0.60953	-0.00033757	-2.7401	-0.0015175	-3.3496	-0.0018551	553.8304129861303	90.877	4.8358	90.877	89.691	94.526	0					332	112	5	0	0	0	0.78536	1	9007	9007		29.15	1.2673	1	3935500			67088	8191	44590	44609	76361	76361					0.10094577919812764
YTNVSVKLIL	10	Unmodified	_YTNVSVKLIL_					0	0	0		nc|ENSG00000173482|P28827|PTPRM;ENSG00000173482|ENST00000580170|PTPRM	nc|ENSG00000173482|P28827|PTPRM	nc|ENSG00000173482|P28827|PTPRM	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	575.3455810546875	2	575.347532	1148.68051	-0.3799	-0.00021857	-2.6981	-0.0015524	-3.078	-0.0017709	575.3459117588899	98.957	2.3582	98.957	98.457	100.82	0					160	56	5	0	0	0	0.86471	1	9973	9973		30.318	0	1	2637800			67089	6862	44591	44610	76362	76362					0.11211731234061517
YTPATAST	8	Unmodified	_YTPATAST_					0	0	0			REV__ENSG00000257743|ENST00000477922|MGAM2	REV__ENSG00000257743|ENST00000477922|MGAM2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	406.24859619140625	2	406.195251	810.375948	1.1283	0.00045833	-0.74787	-0.00030378	0.38048	0.00015455	406.19438026552774	88.428	0.36346	88.354	88.073	88.436	-0.074005					19	8	4	0	0	0	0.4196	1	9178	9178		18.324	0	1	150460	+		67090	23924	44592	44611	76363	76363					-0.03682445190281669
YTPGHLDP	8	Unmodified	_YTPGHLDP_					0	0	0		nc|ENSG00000105339|A2RUS2-2|DENND3;nc|ENSG00000105339|A2RUS2|DENND3;ENSG00000105339|ENST00000519811|DENND3	nc|ENSG00000105339|A2RUS2-2|DENND3	nc|ENSG00000105339|A2RUS2-2|DENND3	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	450.27435302734375	2	450.216517	898.418482	1.7624	0.00079346	2.7951	0.0012584	4.5575	0.0020519	450.2170410474066	93.649	0.21572	93.588	93.454	93.67	-0.06144					6	4	2	0	0	0	0.4196	1	9952	9952		31.955	0	1	39085			67091	2205	44593	44612	76364	76364					-0.03479050062037459
YTPPLANYLLS	11	Unmodified	_YTPPLANYLLS_					0	0	0		ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	626.3795166015625	2	626.334621	1250.65469	0.92565	0.00057977	-3.262	-0.0020431	-2.3364	-0.0014633	626.3322676884466	105.74	0.37517	105.84	105.5	105.87	0.10181					14	9	2	0	0	0	0.17347	1	11236	11236		29.17	0	1	398610			67092	1026	44594	44613	76365	76365					0.039388369917332966
YTPPWVMAGG	10	Unmodified	_YTPPWVMAGG_					0	0	0			REV__ENSG00000086570|ENST00000261800|FAT2	REV__ENSG00000086570|ENST00000261800|FAT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	539.7554931640625	2	539.754953	1077.49535	-1.3334	-0.00071971	3.9408	0.002127	2.6073	0.0014073	539.7567988116976	29.655	0.606	29.626	29.3	29.906	-0.029207					30	13	3	0	0	0	0.86452	1	1894	1894		30.504	0	1	328180	+		67093	16912	44595	44614	76366	76366					-0.04029574837204564
YTPQYVWP	8	Unmodified	_YTPQYVWP_					0	0	0			REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	REV__nc|ENSG00000172403|Q9UMS6-4|SYNPO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	527.2584228515625	2	527.255643	1052.49673	0.86662	0.00045693	1.9944	0.0010515	2.861	0.0015085	527.256566104279	25.63	0.81838	25.598	25.164	25.983	-0.032125					65	25	4	0	0	0	0.884	1	1055	1055		33.516	0	1	358050	+		67094	21829	44596	44615	76367	76367					-0.02741617476817737
YTPRRLRQ	8	Unmodified	_YTPRRLRQ_					0	0	0		ENSG00000176473|ENST00000402312|WDR25	ENSG00000176473|ENST00000402312|WDR25	ENSG00000176473|ENST00000402312|WDR25	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	545.317138671875	2	545.317432	1088.62031	-0.68757	-0.00037494	-0.58844	-0.00032088	-1.276	-0.00069583	545.3169890316105	88.795	3.0456	88.795	86.777	89.823	0					241	70	4	0	0	0	0.87922	1	8485	8485		31.955	0	1	3608000			67095	7084	44597	44616	76368	76368					0.07954478414171717
YTPVPSSSV	9	Unmodified	_YTPVPSSSV_					0	0	0		ENSG00000076067|ENST00000262031|RBMS2	ENSG00000076067|ENST00000262031|RBMS2	ENSG00000076067|ENST00000262031|RBMS2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	468.7374572753906	2	468.737283	935.460012	-0.11485	-5.3835E-05	0.73154	0.0003429	0.61669	0.00028906	468.73712660648437	74.635	0.65882	74.678	74.408	75.067	0.042908					32	22	2	0	0	0	0.58151	1	7151	7151		47.916	9.1095	1	47953			67096	1350	44598	44617	76369	76369					-0.010299140933625495
YTPVPSSSV	9	Unmodified	_YTPVPSSSV_					0	0	0		ENSG00000076067|ENST00000262031|RBMS2	ENSG00000076067|ENST00000262031|RBMS2	ENSG00000076067|ENST00000262031|RBMS2	MULTI-MATCH-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3		2	468.737283	935.460012	-0.37768	-0.00017703	-0.043974	-2.0612E-05	-0.42165	-0.00019764	468.737234211537	74.535	0.47767	74.491	74.257	74.734	-0.043877	-0.070206	-0.00051484	NaN	47.916	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48688			67097	1350	44598	44617							-0.010299140933625495
YTPVPSSSV	9	Unmodified	_YTPVPSSSV_					0	0	0		ENSG00000076067|ENST00000262031|RBMS2	ENSG00000076067|ENST00000262031|RBMS2	ENSG00000076067|ENST00000262031|RBMS2	MULTI-MATCH-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	468.737283	935.460012	0.53434	0.00025047	0.81357	0.00038135	1.3479	0.00063182	468.73688883898603	74.346	0.80302	74.477	74.16	74.963	0.13126	-0.084572	0.00028908	NaN	47.916	37	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63809			67098	1350	44598	44617							-0.010299140933625495
YTQKKWKSLT	10	Unmodified	_YTQKKWKSLT_					0	0	0		ENST00000496563.1_1_3:44598878-44609942:+|nuORF;nc|ENSG00000196345|Q9P0L1-2|ZKSCAN7;ENSG00000196345|ENST00000426540|ZKSCAN7	ENST00000496563.1_1_3:44598878-44609942:+|nuORF	ENST00000496563.1_1_3:44598878-44609942:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3621826171875	2	641.861338	1281.70812	1.706	0.001095	-4.3678	-0.0028035	-2.6617	-0.0017085	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.64457	1	12859	12859		47.657	4.7931	1	27133000			67099	8039	44599	44618	76370	76370					0.07853634494290418
YTQQLKVLE	9	Unmodified	_YTQQLKVLE_					0	0	0			REV__ENSG00000140575|ENST00000268182|IQGAP1	REV__ENSG00000140575|ENST00000268182|IQGAP1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	561.3118896484375	2	561.313689	1120.61282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.577	1	59.13	58.63	59.63	0.55323								0	0	0	0.41698	1	6156	6156		56.721	9.0637	1		+		67100	19633	44600	44619	76371	76371					0.05734281303261923
YTQRQLLKFL	10	Unmodified	_YTQRQLLKFL_					0	0	0			REV__ENSG00000111670|ENST00000299314|GNPTAB	REV__ENSG00000111670|ENST00000299314|GNPTAB	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.25634765625	3	437.259079	1308.75541	-0.16089	-7.0349E-05	-3.8349	-0.0016768	-3.9958	-0.0017472	437.2573267728252	99.477	2.8624	99.521	98.521	101.38	0.043282					177	66	3	0	0	0	0.85633	2	10648	10494;10648		27.047	1.9213	1	727380	+		67101	17883	44601	44620	76372;76373	76373					0.11337913765282792
YTQRQLLKFL	10	Unmodified	_YTQRQLLKFL_					0	0	0			REV__ENSG00000111670|ENST00000299314|GNPTAB	REV__ENSG00000111670|ENST00000299314|GNPTAB	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.25628662109375	3	437.259079	1308.75541	-1.8163	-0.00079418	-2.1335	-0.00093288	-3.9497	-0.0017271	437.2580894693445	99.183	2.5872	99.369	98.322	100.91	0.18581					159	59	3	0	0	0	0.86621	1	10187	10187		26.063	9.5335	1	447430	+		67102	17883	44601	44620	76374	76374					0.11337913765282792
YTREQIKLERR	11	Unmodified	_YTREQIKLERR_					0	0	0			REV__nc|ENSG00000003987|Q9Y216-2|MTMR7	REV__nc|ENSG00000003987|Q9Y216-2|MTMR7	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	497.9505920410156	3	497.951196	1490.83176	-0.23329	-0.00011617	-0.065396	-3.2564E-05	-0.29869	-0.00014873	497.9511036347425	24.221	1.0288	24.175	23.523	24.551	-0.04598					53	23	4	0	0	0	0.78391	1	889	889		14.694	0.60766	1	99074	+		67103	16055	44602	44621	76375	76375					0.1059768559459826
YTRKDKGPNPK	11	Unmodified	_YTRKDKGPNPK_					0	0	0			REV__ENST00000399586.2_1_X:74960734-74966719:-|nuORF;REV__nc|ENSG00000182670|P53804-3|TTC3	REV__nc|ENSG00000182670|P53804-3|TTC3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	434.88494873046875	3	435.242088	1302.70443	1.3943	0.00060684	-1.7986	-0.00078281	-0.40431	-0.00017597	435.24134071057574	27.988	1.0358	27.733	27.282	28.318	-0.25465					49	24	3	0	0	0	0.17244	1	1730	1730		14.779	11.37	1	63507	+		67104	26231;22541	44603	44622	76376	76376					0.06518964720407894
YTRKKLILLV	10	Unmodified	_YTRKKLILLV_					0	0	0			REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	623.9155883789062	2	623.915916	1245.81728	0.92337	0.0005761	-0.11573	-7.2206E-05	0.80764	0.0005039	623.9158741950614	109.97	0.49825	110.05	109.81	110.31	0.073692					34	20	2	0	0	0	0.8932	1	11810	11810		10.265	0	1	1648100	+		67105	25105	44604	44623	76377	76377					0.2042026518442981
YTRKKLILLV	10	Unmodified	_YTRKKLILLV_					0	0	0			REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	623.9139404296875	2	623.915916	1245.81728	2.293	0.0014306	-0.76125	-0.00047496	1.5318	0.00095569	624.4172230147561	108.94	0.56281	109.01	108.67	109.23	0.06794					43	29	2	0	0	0	0.91876	1	13224	13224		6.3127	0	1	644890	+		67106	25105	44604	44623	76378	76378					0.2042026518442981
YTRKKLILLV	10	Unmodified	_YTRKKLILLV_					0	0	0			REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	623.915916	1245.81728	1.3354	0.00083319	-0.09829	-6.1325E-05	1.2371	0.00077187	623.915929130064	108.91	0.95377	109.04	108.28	109.23	0.13026	0.014264	0.00037376	NaN	6.3127	31	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	966610	+		67107	25105	44604	44623							0.2042026518442981
YTRKKLILLV	10	Unmodified	_YTRKKLILLV_					0	0	0			REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6		2	623.915916	1245.81728	0.92333	0.00057608	0.67423	0.00042066	1.5976	0.00099674	623.9161045794303	108.97	0.29948	109.05	108.9	109.2	0.078552	0.018605	0.0013377	NaN	6.3127	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	714320	+		67108	25105	44604	44623							0.2042026518442981
YTRKKLILLV	10	Unmodified	_YTRKKLILLV_					0	0	0			REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7		2	623.915916	1245.81728	-1.2115	-0.00075589	3.1087	0.0019396	1.8972	0.0011837	624.4195798768543	108.96	0.42003	108.98	108.73	109.15	0.020561	-0.047693	0.0043756	NaN	6.3127	26	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	724950	+		67109	25105	44604	44623							0.2042026518442981
YTRKKLILLV	10	Unmodified	_YTRKKLILLV_					0	0	0			REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	623.915916	1245.81728	2.293	0.0014306	-0.76125	-0.00047496	1.5318	0.00095569	624.4172230147561	108.94	0.56281	109.01	108.67	109.23	0.06794	-0.019841	-0.00045351	NaN	6.3127	43	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	644890	+		67110	25105	44604	44623							0.2042026518442981
YTRKKLILLV	10	Unmodified	_YTRKKLILLV_					0	0	0			REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	REV__ENST00000330198.8_2_3:197770265-197770433:+|nuORF	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	623.915916	1245.81728	5.9046	0.003684	-4.501	-0.0028082	1.4036	0.00087573	624.4148058061545	108.97	0.33534	109.06	108.83	109.16	0.090057	0.034664	-0.00512	NaN	6.3127	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	415930	+		67111	25105	44604	44623							0.2042026518442981
YTRKSHTP	8	Unmodified	_YTRKSHTP_					0	0	0			REV__nc|ENSG00000166432|Q5H9K5-2|ZMAT1	REV__nc|ENSG00000166432|Q5H9K5-2|ZMAT1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25836181640625	2	495.261791	988.509028	-2.6631	-0.0013189	-2.7551	-0.0013645	-5.4182	-0.0026834	495.26028573461133	40.858	1.9733	41.25	40.867	42.841	0.39209					105	53	3	0	0	0	0.92457	1	3543	3543		47.916	0.25827	1	8396000	+		67112	21293	44605	44624	76379	76379					0.014314189862375315
YTRLLLLL	8	Unmodified	_YTRLLLLL_					0	0	0			REV__ENSG00000166189|ENST00000299238|HPS6	REV__ENSG00000166189|ENST00000299238|HPS6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	502.8138122558594	2	502.828778	1003.643	-0.061754	-3.1052E-05	-2.2289	-0.0011208	-2.2907	-0.0011518	502.82814997862465	97.356	0.51276	97.419	97.125	97.638	0.062233					14	9	2	0	0	0	0.4196	1	10263	10263		19.36	0	1	168290	+		67113	21265	44606	44625	76380	76380					0.1413268475911309
YTRLLLLL	8	Unmodified	_YTRLLLLL_					0	0	0			REV__ENSG00000166189|ENST00000299238|HPS6	REV__ENSG00000166189|ENST00000299238|HPS6	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	502.81414794921875	2	502.828778	1003.643	-0.082585	-4.1526E-05	0.082612	4.154E-05	2.7015E-05	1.3584E-08	502.82944007801956	97.176	1.0547	97.224	96.87	97.925	0.048157					33	24	2	0	0	0	0.4196	1	10402	10402		19.36	0	1	261930	+		67114	21265	44606	44625	76381	76381					0.1413268475911309
YTRLLLLL	8	Unmodified	_YTRLLLLL_					0	0	0			REV__ENSG00000166189|ENST00000299238|HPS6	REV__ENSG00000166189|ENST00000299238|HPS6	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	502.814208984375	2	502.828778	1003.643	0.77293	0.00038865	-0.57514	-0.0002892	0.19779	9.9455E-05	502.8282178726464	97.117	0.70514	97.281	96.966	97.671	0.16316					27	16	2	0	0	0	0.4196	1	9991	9991		19.36	1.995	1	255970	+		67115	21265	44606	44625	76382	76382					0.1413268475911309
YTRLRGIS	8	Unmodified	_YTRLRGIS_					0	0	0		nc|ENSG00000107331|Q9BZC7|ABCA2;ENSG00000107331|ENST00000341511|ABCA2;nc|ENSG00000107331|Q9BZC7-4|ABCA2;ENST00000463603.5_1_9:139903820-139904575:-|nuORF	nc|ENSG00000107331|Q9BZC7|ABCA2	nc|ENSG00000107331|Q9BZC7|ABCA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	483.2780456542969	2	483.279983	964.545414	-0.69726	-0.00033697	-1.7319	-0.00083699	-2.4292	-0.001174	483.2791425455724	95.175	1.9923	95.222	94.662	96.654	0.046982					116	46	3	0	0	0	0.88185	1	10171	10171		32.812	0.85756	1	1260700			67116	2343	44607	44626	76383	76383					0.061722958829591335
YTRNAIKGT	9	Unmodified	_YTRNAIKGT_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|43|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|43|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|43|1|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	512.2816772460938	2	512.282723	1022.55089	1.2711	0.00065114	-3.95	-0.0020235	-2.6789	-0.0013724	512.2806294768477	86.671	3.241	86.597	85.234	88.475	-0.074005					135	75	2	0	0	0	0.64555	1	9001	9001		44.377	5.1244	1	387010			67117	14509	44608	44627	76384	76384					0.0405197467475773
YTRNAIKGT	9	Unmodified	_YTRNAIKGT_					0	0	0		HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|43|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|43|1|sense	HERVI-int_dup42|chr9:133032543-133037838:-|5.726096858814309|0.1803841912816908|4.99|63.0|43|1|sense	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	512.2818603515625	2	512.282723	1022.55089	-0.3427	-0.00017556	-2.3981	-0.0012285	-2.7408	-0.0014041	512.2814243636773	86.125	3.8841	86.31	84.842	88.726	0.18523					170	91	2	0	0	0	0.67345	1	8527	8527		42.396	4.5846	1	381930			67118	14509	44608	44627	76385	76385					0.0405197467475773
YTRNQCGRALS	11	Unmodified	_YTRNQCGRALS_					0	0	0		ENSG00000198551|ENST00000361113|ZNF627	ENSG00000198551|ENST00000361113|ZNF627	ENSG00000198551|ENST00000361113|ZNF627	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	634.8926391601562	2	634.811853	1267.60915	-0.13431	-8.5261E-05	-1.0985	-0.00069736	-1.2328	-0.00078262	634.8114245560797	105.97	0.11749	105.94	105.86	105.97	-0.025154					4	2	2	0	0	0	0.17347	1	11481	11481		22.58	0	1	69383			67119	8284	44609	44628	76386	76386					-0.013947117422503652
YTRNRRRR	8	Unmodified	_YTRNRRRR_					0	0	0		ENST00000481195.5_1_5:133561503-133561806:-|nuORF	ENST00000481195.5_1_5:133561503-133561806:-|nuORF	ENST00000481195.5_1_5:133561503-133561806:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	589.3428955078125	2	589.342304	1176.67005	0.71715	0.00042265	0.79855	0.00047062	1.5157	0.00089327	589.3426450291697	92.057	1.562	92.503	91.922	93.484	0.44661					135	36	4	0	0	0	0.88601	1	11030	11030		34.173	9.6534	1	2439600			67120	12455	44610	44629	76387	76387					0.088786061428209
YTRPTPVQK	9	Unmodified	_YTRPTPVQK_					0	0	0		ENST00000463199.1_1_Y:15025644-15026909:+|nuORF;ENST00000472510.5_1_Y:15024878-15026576:+|nuORF;nc|ENSG00000067048|O15523-3|DDX3Y;ENST00000542215.5_1_X:41193845-41203505:+|nuORF;nc|ENSG00000215301|O00571-2|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X	ENST00000463199.1_1_Y:15025644-15026909:+|nuORF	ENST00000463199.1_1_Y:15025644-15026909:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.3060913085938	2	545.306198	1088.59784	-0.14303	-7.7996E-05	-0.24396	-0.00013303	-0.38699	-0.00021103	545.3060632440186	24.601	1.8516	24.273	23.461	25.312	-0.32825					98	41	5	0	0	0	0.018862	4	1192	1180;1192;1204;1216		126.24	44.002	1	6005700			67121	1173	44611	44630	76388;76389;76390;76391	76389					0.057088342259021374
YTRPTPVQK	9	Unmodified	_YTRPTPVQK_					0	0	0		ENST00000463199.1_1_Y:15025644-15026909:+|nuORF;ENST00000472510.5_1_Y:15024878-15026576:+|nuORF;nc|ENSG00000067048|O15523-3|DDX3Y;ENST00000542215.5_1_X:41193845-41203505:+|nuORF;nc|ENSG00000215301|O00571-2|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X	ENST00000463199.1_1_Y:15025644-15026909:+|nuORF	ENST00000463199.1_1_Y:15025644-15026909:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	545.3062133789062	2	545.306198	1088.59784	1.622	0.00088447	-1.9632	-0.0010705	-0.34119	-0.00018606	545.3051122101872	24.517	1.7889	24.003	23.196	24.985	-0.51365					105	40	6	0	0	0	0.0358	5	1189	1177;1189;1201;1213;1225		114.89	43.017	1	6709400			67122	1173	44611	44630	76392;76393;76394;76395;76396	76393					0.057088342259021374
YTRRPNALV	9	Unmodified	_YTRRPNALV_					0	0	0			REV__ENST00000556439.1_1_14:20920437-20922842:-|nuORF	REV__ENST00000556439.1_1_14:20920437-20922842:-|nuORF	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	545.9130859375	2	545.311815	1088.60908	-1.0948	-0.00059701	1.111	0.00060582	0.016144	8.8033E-06	545.3122619949064	27.51	0.56813	27.334	27.105	27.673	-0.17559					26	12	3	0	0	0	0.20789	1	1578	1578		49.442	12.282	1	342280	+		67123	17027	44612	44631	76397	76397					0.0683165632001419
YTRSVLMVAIL	11	Unmodified	_YTRSVLMVAIL_					0	0	0			REV__ENSG00000117528|ENST00000370214|ABCD3	REV__ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3690795898438	2	633.367941	1264.72133	-0.087569	-5.5464E-05	2.0471	0.0012966	1.9596	0.0012411	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.70737	1	9956	9956		30.318	1.1477	1	7059800	+		67124	18268	44613	44632	76398	76398					0.09955749282039505
YTRSVLMVAIL	11	Unmodified	_YTRSVLMVAIL_					0	0	0			REV__ENSG00000117528|ENST00000370214|ABCD3	REV__ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	633.3689575195312	2	633.367941	1264.72133	1.5977	0.0010119	0.2751	0.00017424	1.8728	0.0011861	633.3679902551257	97.279	4.7141	97.665	96.782	101.5	0.38548					341	116	4	0	0	0	0.72374	1	11621	11621		24.519	7.0512	1	10012000	+		67125	18268	44613	44632	76399	76399					0.09955749282039505
YTRSVLMVAIL	11	Unmodified	_YTRSVLMVAIL_					0	0	0			REV__ENSG00000117528|ENST00000370214|ABCD3	REV__ENSG00000117528|ENST00000370214|ABCD3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	633.3684692382812	2	633.367941	1264.72133	2.3091	0.0014625	-0.43146	-0.00027328	1.8776	0.0011892	633.3675588029352	97.441	4.5204	97.832	96.947	101.47	0.39065					325	111	4	0	0	0	0.69071	1	11880	11880		45.972	13.16	1	10333000	+		67126	18268	44613	44632	76400	76400					0.09955749282039505
YTRVKGKGKG	10	Unmodified	_YTRVKGKGKG_					0	0	0			REV__chr1:153690382-153693352|13|32.92|0.66|5.64|+|0|NPR1,NPR1|1	REV__chr1:153690382-153693352|13|32.92|0.66|5.64|+|0|NPR1,NPR1|1	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	547.3298950195312	2	547.327465	1092.64038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.28	1	114.28	113.78	114.78	0.0011978								0	0	0	0.45132	1	13786	13786		20.947	2.6225	1		+		67127	15415	44614	44633	76401	76401					0.09776229354133648
YTRVVRRTL	9	Unmodified	_YTRVVRRTL_					0	0	0		ENST00000477618.1_1_9:74817496-74842957:+|nuORF;nc|ENSG00000119125|Q9Y2T3-2|GDA;ENSG00000119125|ENST00000358399|GDA;nc|ENSG00000119125|Q9Y2T3-3|GDA	ENST00000477618.1_1_9:74817496-74842957:+|nuORF	ENST00000477618.1_1_9:74817496-74842957:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	582.3544311523438	2	582.354014	1162.69348	-1.3468	-0.00078434	0.68703	0.00040009	-0.65981	-0.00038425	582.3542393316011	113.32	6.698	113.27	113.24	119.94	-0.044777					377	158	3	0	0	0	0.7932	1	12905	12905		19.104	1.7386	1	3937500			67128	3055	44615	44634	76402	76402					0.11863607136797327
YTRYQTLE	8	Unmodified	_YTRYQTLE_					0	0	0		ENSG00000108511|ENST00000225648|HOXB6;ENST00000520854.1_1_7:27181456-27182390:-|nuORF;ENST00000567101.2_1_17:46685206-46710927:-|nuORF;ENSG00000260027|ENST00000239165|HOXB7;ENSG00000172789|ENST00000312492|HOXC5;ENSG00000122592|ENST00000242159|HOXA7;ENSG00000106006|ENST00000222728|HOXA6;ENSG00000120075|ENST00000239151|HOXB5;ENSG00000106004|ENST00000222726|HOXA5	ENSG00000108511|ENST00000225648|HOXB6	ENSG00000108511|ENST00000225648|HOXB6	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	537.2670288085938	2	537.266739	1072.51892	0.37189	0.0001998	-0.37292	-0.00020035	-0.0010281	-5.5236E-07	537.2664300657294	31.923	0.70452	31.917	31.616	32.32	-0.0061455					37	16	3	0	0	0	0.92973	1	1775	1775		50.025	2.3672	1	172920			67129	2412	44616	44635	76403	76403					-0.014434377990255598
YTSDYFISY	9	Unmodified	_YTSDYFISY_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	579.75341796875	2	579.75313	1157.49171	-0.90515	-0.00052476	1.3945	0.00080844	0.4893	0.00028367	579.7539391958094	78.275	0.77407	78.332	78.024	78.799	0.056114					78	25	4	0	0	0	0.19953	5	7598	7582;7589;7598;7606;7616		73.975	25.344	1	496860			67130	3973	44617	44636	76404;76405;76406;76407;76408	76406					-0.08073966130086774
YTSDYFISY	9	Unmodified	_YTSDYFISY_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	579.7530517578125	2	579.75313	1157.49171	0.37513	0.00021749	0.13071	7.5777E-05	0.50584	0.00029326	579.7531276961427	78.292	0.83783	78.239	77.877	78.715	-0.053558					78	25	4	0	0	0	0.22631	4	7798	7781;7789;7798;7817		71.296	23.38	1	568320			67131	3973	44617	44636	76409;76410;76411;76412	76411					-0.08073966130086774
YTSDYFISY	9	Unmodified	_YTSDYFISY_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.7528686523438	2	579.75313	1157.49171	-0.27607	-0.00016005	0.72228	0.00041874	0.4462	0.00025869	579.7534821789302	78.131	0.87527	78.181	77.655	78.53	0.04969					85	32	4	0	0	0	0.15928	3	7682	7663;7672;7682		82.305	24.494	1	547020			67132	3973	44617	44636	76413;76414;76415	76415					-0.08073966130086774
YTSDYFISY	9	Unmodified	_YTSDYFISY_					0	0	0		nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1;ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1	nc|ENSG00000134954|P14921-5|ETS1	nc|ENSG00000134954|P14921-5|ETS1	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	579.75313	1157.49171	0.6398	0.00037093	-1.8576	-0.0010769	-1.2178	-0.000706	579.752762672731	78.153	0.1653	78.28	78.183	78.349	0.12695	0.022325	-0.0028571	NaN	82.305	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33549			67133	3973	44617	44636							-0.08073966130086774
YTSGHSVAGV	10	Unmodified	_YTSGHSVAGV_					0	0	0		nc|ENSG00000147180|Q9Y462|ZNF711;nc|ENSG00000147180|Q9Y462-2|ZNF711;ENSG00000147180|ENST00000674551|ZNF711	nc|ENSG00000147180|Q9Y462|ZNF711	nc|ENSG00000147180|Q9Y462|ZNF711	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	489.236328125	2	489.237981	976.461409	-2.6543	-0.0012986	-0.42131	-0.00020612	-3.0756	-0.0015047	489.2378098143177	63.789	1.3068	63.816	63.573	64.88	0.027142					83	36	4	0	0	0	0.86589	1	6031	6031		29.15	2.4566	1	723550			67134	4888	44618	44637	76416	76416					-0.02776280004604814
YTSIVAELLLN	11	Unmodified	_YTSIVAELLLN_					0	0	0		nc|ENSG00000160882|P15538-2|CYP11B1;ENSG00000160882|ENST00000292427|CYP11B1	nc|ENSG00000160882|P15538-2|CYP11B1	nc|ENSG00000160882|P15538-2|CYP11B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	618.3465576171875	2	618.347729	1234.6809	-0.1645	-0.00010172	-2.661	-0.0016454	-2.8255	-0.0017472	618.3459516692319	98.085	2.8577	98.085	97.03	99.887	0					190	68	4	0	0	0	0.73893	1	9974	9974		24.519	0	1	511870			67135	5612	44619	44638	76417	76417					0.07295106163246601
YTSLVQLLPTG	11	Unmodified	_YTSLVQLLPTG_					0	0	0		ENST00000252512.13_1_8:21863862-21863988:+|nuORF	ENST00000252512.13_1_8:21863862-21863988:+|nuORF	ENST00000252512.13_1_8:21863862-21863988:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	596.3324584960938	2	596.334621	1190.65469	-0.57959	-0.00034563	-2.3011	-0.0013722	-2.8807	-0.0017178	596.3331084008277	96.35	3.5496	96.416	95.306	98.855	0.06591					255	82	4	0	0	0	0.68532	1	10075	10075		33.922	1.1711	1	1242500			67136	9307	44620	44639	76418	76418					0.06698836991745338
YTSRLKKKQGT	11	Unmodified	_YTSRLKKKQGT_					0	0	0			REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	437.25701904296875	3	437.257738	1308.75138	2.3979	0.0010485	-3.3832	-0.0014793	-0.98538	-0.00043086	437.25617297786823	99.22	2.8692	99.166	98.246	101.11	-0.053734					176	66	3	0	0	0	0.67762	3	10770	10711;10770;10879		35.178	5.6275	1	988170	+		67137	28061	44621	44640	76419;76420;76421	76420					0.10935824271541605
YTSRLKKKQGT	11	Unmodified	_YTSRLKKKQGT_					0	0	0			REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	437.2567138671875	3	437.257738	1308.75138	-1.4866	-0.00065002	0.58687	0.00025661	-0.89971	-0.00039341	437.2579506918341	98.943	2.9776	99.165	98.078	101.06	0.22262					200	69	4	0	0	0	0.69687	3	10295	10295;10306;10366		32.034	6.1424	1	981430	+		67138	28061	44621	44640	76422;76423;76424	76422					0.10935824271541605
YTSRLKKKQGT	11	Unmodified	_YTSRLKKKQGT_					0	0	0			REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	437.2570495605469	3	437.257738	1308.75138	0.72446	0.00031677	-1.611	-0.00070442	-0.88654	-0.00038765	437.25695885518746	99.04	2.9068	99.197	98.276	101.18	0.15659					196	67	4	0	0	0	0.74405	1	10394	10394		23.378	2.3457	1	670840	+		67139	28061	44621	44640	76425	76425					0.10935824271541605
YTSRLKKKQGT	11	Unmodified	_YTSRLKKKQGT_					0	0	0			REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	437.2567443847656	3	437.257738	1308.75138	-1.8163	-0.00079418	0.93317	0.00040803	-0.8831	-0.00038614	437.2580894693445	99.183	2.5872	99.369	98.322	100.91	0.18581					159	59	3	0	0	0	0.76251	1	10341	10341		19.263	0	1	447430	+		67140	28061	44621	44640	76426	76426					0.10935824271541605
YTSRLKKKQGT	11	Unmodified	_YTSRLKKKQGT_					0	0	0			REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	REV__ENST00000518267.5_1_5:171533890-171542129:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2566833496094	3	437.257738	1308.75138	1.9496	0.00085247	-2.6885	-0.0011755	-0.73887	-0.00032308	437.25651996050084	98.928	2.561	99.291	98.354	100.91	0.36292					151	63	3	0	0	0	0.71207	1	12082	12082		29.551	0.97402	1	662950	+		67141	28061	44621	44640	76427	76427					0.10935824271541605
YTSVEIYG	8	Unmodified	_YTSVEIYG_					0	0	0		ENSG00000244234|ENST00000463439|GMCL2	ENSG00000244234|ENST00000463439|GMCL2	ENSG00000244234|ENST00000463439|GMCL2	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	465.77716064453125	2	466.224008	930.433463	0.58127	0.000271	1.0869	0.00050675	1.6682	0.00077775	466.2253392857724	79.809	0.66165	79.95	79.648	80.31	0.14118					64	30	3	0	0	0	0.4196	1	7601	7601		25.45	13.939	1	142830			67142	8821	44622	44641	76428	76428					-0.03453602984711779
YTSVILLLSR	10	Unmodified	_YTSVILLLSR_					0	0	0		nc|ENSG00000123338|P55160-2|NCKAP1L;ENSG00000123338|ENST00000293373|NCKAP1L	nc|ENSG00000123338|P55160-2|NCKAP1L	nc|ENSG00000123338|P55160-2|NCKAP1L	MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	582.8516235351562	2	582.852981	1163.69141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.82	1	115.85	115.35	116.35	0.026466								0	0	0	0.45132	1	12714	12714		20.947	0	1				67143	3268	44623	44642	76429	76429					0.11611133608334967
YTTATPSA	8	Unmodified	_YTTATPSA_					0	0	0			REV__chr9:14307520-14321941|50|13.12|0.29|5.52|-|ENST00000646622|NFIB,NFIB	REV__chr9:14307520-14321941|50|13.12|0.29|5.52|-|ENST00000646622|NFIB,NFIB	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	406.24847412109375	2	406.195251	810.375948	1.6611	0.00067473	-3.1828	-0.0012928	-1.5217	-0.00061811	406.1941280583675	88.352	0.84756	88.8	88.313	89.16	0.44892					38	20	3	0	0	0	0.4196	1	10375	10375		26.796	1.3459	1	179990	+		67144	15932	44624	44643	76430	76430					-0.036824451902703004
YTTLIRVCLAL	11	Unmodified	_YTTLIRVCLAL_					0	0	0			REV__nc|ENSG00000164037|Q4ZJI4-2|SLC9B1	REV__nc|ENSG00000164037|Q4ZJI4-2|SLC9B1	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	633.3692626953125	2	633.367941	1264.72133	-0.087569	-5.5464E-05	2.0471	0.0012966	1.9596	0.0012411	633.3690747190554	97.918	4.586	97.918	97.03	101.62	0					338	109	4	0	0	0	0.51007	1	9905	9905		51.193	4.7359	1	7059800	+		67145	21011	44625	44644	76431	76431					0.09955749282016768
YTTPQFHPE	9	Unmodified	_YTTPQFHPE_					0	0	0		ENST00000495294.1_1_X:2825314-2825683:-|nuORF;ENSG00000006756|ENST00000381154|ARSD;nc|ENSG00000006756|P51689-3|ARSD	ENST00000495294.1_1_X:2825314-2825683:-|nuORF	ENST00000495294.1_1_X:2825314-2825683:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.34033203125	2	560.258914	1118.50327	0.86169	0.00048277	-2.7272	-0.0015279	-1.8655	-0.0010452	560.2572174484709	102.33	0.27641	102.47	102.37	102.65	0.13523					13	6	3	0	0	0	0.20789	1	10762	10762		26.693	6.6961	1	159920			67146	714	44626	44645	76432	76432					-0.051237243160812795
YTVELLLRL	9	Unmodified	_YTVELLLRL_					0	0	0			REV__ENSG00000169710|ENST00000306749|FASN	REV__ENSG00000169710|ENST00000306749|FASN	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	560.3402709960938	2	560.342249	1118.66995	0.86184	0.00048292	-4.0684	-0.0022797	-3.2065	-0.0017968	560.3398879742181	105.87	1.7587	105.97	104.89	106.65	0.099007					143	43	5	0	0	0	0.78536	1	11174	11174		29.15	2.4566	1	1773300	+		67147	21595	44627	44646	76433	76433					0.11535748579603933
YTVLFKQLKLG	11	Unmodified	_YTVLFKQLKLG_					0	0	0			REV__ENSG00000059588|ENST00000040877|TARBP1	REV__ENSG00000059588|ENST00000040877|TARBP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	437.2681579589844	3	437.267463	1308.78056	-1.0896	-0.00047642	1.9138	0.00083683	0.82421	0.0003604	437.2682076309449	48.376	1.4718	48.845	48.119	49.591	0.46941					123	36	4	0	0	0	0.74022	1	4736	4736		24.232	0.70912	1	3096400	+		67148	16445	44628	44647	76434	76434					0.13851968567837503
YTVSIKSSKLL	11	Unmodified	_YTVSIKSSKLL_					0	0	0		nc|ENSG00000197121|Q75T13-2|PGAP1;ENSG00000197121|ENST00000354764|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	619.8665161132812	2	619.871371	1237.72819	0.5439	0.00033715	-3.7831	-0.002345	-3.2392	-0.0020079	619.8688640764029	94.069	2.6085	94.504	92.761	95.369	0.43539					140	64	3	0	0	0	0.74763	1	11275	11275		22.58	1.7425	1	1280900			67149	8136	44629	44648	76435	76435					0.11883385434248339
YTVSLVTG	8	Unmodified	_YTVSLVTG_					0	0	0		ENST00000502950.1_1_4:183601480-183676413:+|nuORF;ENSG00000218336|ENST00000511685|TENM3;nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	ENST00000502950.1_1_4:183601480-183676413:+|nuORF;nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.22760009765625	2	420.229094	838.443634	-1.3082	-0.00054975	-1.524	-0.00064043	-2.8322	-0.0011902	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.91005	1	7346	7346		42.474	7.2737	1	419890			67150	14976;8661	44630	44649	76436	76436					0.01795004740552031
YTVSLVTG	8	Unmodified	_YTVSLVTG_					0	0	0		ENST00000502950.1_1_4:183601480-183676413:+|nuORF;ENSG00000218336|ENST00000511685|TENM3;nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	ENST00000502950.1_1_4:183601480-183676413:+|nuORF;nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2274475097656	2	420.229094	838.443634	-0.18765	-7.8855E-05	-2.6467	-0.0011122	-2.8344	-0.0011911	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.884	2	7724	7707;7724		50.025	7.6284	1	743780			67151	14976;8661	44630	44649	76437;76438	76438					0.01795004740552031
YTVSLVTG	8	Unmodified	_YTVSLVTG_					0	0	0		ENST00000502950.1_1_4:183601480-183676413:+|nuORF;ENSG00000218336|ENST00000511685|TENM3;nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	ENST00000502950.1_1_4:183601480-183676413:+|nuORF;nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.22723388671875	2	420.229094	838.443634	0.089833	3.775E-05	-2.9174	-0.001226	-2.8276	-0.0011882	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.91005	2	7906	7906;8074		42.474	1.9018	1	888480			67152	14976;8661	44630	44649	76439;76440	76439					0.01795004740552031
YTVSLVTG	8	Unmodified	_YTVSLVTG_					0	0	0		ENST00000502950.1_1_4:183601480-183676413:+|nuORF;ENSG00000218336|ENST00000511685|TENM3;nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	ENST00000502950.1_1_4:183601480-183676413:+|nuORF;nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	420.2274169921875	2	420.229094	838.443634	-1.7925	-0.00075327	-1.0357	-0.00043521	-2.8282	-0.0011885	420.22855411833393	78.649	5.4221	78.776	76.931	82.353	0.12695					412	174	4	0	0	0	0.91005	2	7464	7464;7493		50.025	11.218	1	831720			67153	14976;8661	44630	44649	76441;76442	76441					0.01795004740552031
YTVSLVTG	8	Unmodified	_YTVSLVTG_					0	0	0		ENST00000502950.1_1_4:183601480-183676413:+|nuORF;ENSG00000218336|ENST00000511685|TENM3;nc|ENSG00000145934|Q9NT68-2|TENM2;ENSG00000145934|ENST00000518659|TENM2	ENST00000502950.1_1_4:183601480-183676413:+|nuORF;nc|ENSG00000145934|Q9NT68-2|TENM2	nc|ENSG00000145934|Q9NT68-2|TENM2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	420.22723388671875	2	420.229094	838.443634	0.53933	0.00022664	-3.4769	-0.0014611	-2.9375	-0.0012344	420.2275359490593	78.88	5.9388	79.018	77.109	83.048	0.13883					411	189	3	0	0	0	0.87922	3	7576	7505;7576;7600		50.025	14.406	1	678130			67154	14976;8661	44630	44649	76443;76444;76445	76444					0.01795004740552031
YTVVIPLLN	9	Unmodified	_YTVVIPLLN_					0	0	0		ENSG00000205029|ENST00000378396|OR5D16	ENSG00000205029|ENST00000378396|OR5D16	ENSG00000205029|ENST00000378396|OR5D16	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	516.3143310546875	2	516.310418	1030.60628	3.0984	0.0015997	4.0844	0.0021088	7.1828	0.0037085	516.3124899317548	102.33	1.1091	102.29	101.92	103.03	-0.047005					68	26	3	0	0	0	0.78058	1	11128	11128		30.504	4.9296	1	756390			67155	8507	44631	44650	76446	76446					0.0922038814253483
YTYNPQFEYQE	11	Unmodified	_YTYNPQFEYQE_					0	0	0		ENSG00000196123|ENST00000563902|MATCAP1;nc|ENSG00000196123|Q68EN5-2|MATCAP1;ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENSG00000196123|ENST00000563902|MATCAP1;ENST00000584346.1_1_18:10724726-10725338:+|nuORF	ENSG00000196123|ENST00000563902|MATCAP1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	494.3007507324219	3	494.545502	1480.61468	-0.58547	-0.00028954	-2.3782	-0.0011761	-2.9637	-0.0014657	494.8797718348461	97.022	0.45015	97.253	97.041	97.491	0.23103					15	10	2	0	0	0	0.17955	1	10012	10012		23.378	9.2919	1	80458			67156	8013;14133	44632	44651	76447	76447					-0.10640754469432068
YVAAGYFLIVV	11	Unmodified	_YVAAGYFLIVV_					0	0	0			REV__ENSG00000203661|ENST00000641363|OR2T5	REV__ENSG00000203661|ENST00000641363|OR2T5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	405.5657043457031	3	405.565509	1213.6747	-1.8641	-0.000756	-0.69082	-0.00028017	-2.5549	-0.0010362	405.56510136906576	61.167	0.87137	61.268	60.446	61.317	0.10082					82	40	3	0	0	0	0.75544	1	5276	5276		20.837	0.52214	1	1002300	+		67157	22550	44633	44652	76448	76448					0.07640632722359442
YVAFLPSPPR	10	Unmodified	_YVAFLPSPPR_					0	0	0		ENST00000475935.5_1_1:33547106-33548240:+|nuORF	ENST00000475935.5_1_1:33547106-33548240:+|nuORF	ENST00000475935.5_1_1:33547106-33548240:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.8157348632812	2	573.818941	1145.62333	-0.77927	-0.00044716	-2.9309	-0.0016818	-3.7102	-0.002129	573.8171128348157	36.202	1.1773	36.211	35.659	36.837	0.0092773					66	25	4	0	0	0	0.86452	1	2373	2373		30.504	0	1	690830			67158	12333	44634	44653	76449	76449					0.05634308748312833
YVAKNAKY	8	Unmodified	_YVAKNAKY_					0	0	0			REV__ENST00000378024.8_2_11:62283382-62283415:-|nuORF	REV__ENST00000378024.8_2_11:62283382-62283415:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	478.7634582519531	2	478.763635	955.512717	-0.019765	-9.4628E-06	-0.19455	-9.3141E-05	-0.21431	-0.0001026	478.76333815385567	51.126	0.7417	51.878	51.614	52.356	0.75174					42	17	3	0	0	0	0.94132	1	5074	5074		54.765	1.4132	1	1765200	+		67159	25883	44635	44654	76450	76450					0.03318088760079263
YVCEECGCTSE	11	Carbamidomethyl (C)	_YVCEEC(Carbamidomethyl (C))GCTSE_	YVC(0.002)EEC(0.819)GC(0.179)TSE		YVC(-26)EEC(6.6)GC(-6.6)TSE		0	1	0		ENSG00000172818|ENST00000335987|OVOL1	ENSG00000172818|ENST00000335987|OVOL1	ENSG00000172818|ENST00000335987|OVOL1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	640.217529296875	2	640.217414	1278.42027	-0.71196	-0.00045581	1.643	0.0010519	0.93107	0.00059609	640.218255317839	75.358	0.69984	75.446	75.146	75.846	0.087639					38	17	3	0	0	0	0.63176	1	6983	6983		40.778	7.9657	3	351800			67160	6797	44636	44655	76451	76451	85				-0.20779913212936663
YVDPQFLTY	9	Unmodified	_YVDPQFLTY_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;ENSG00000181191|ENST00000374571|PJA1;nc|ENSG00000181191|Q8NG27|PJA1	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	573.2792358398438	2	573.279315	1144.54408	-1.059	-0.00060712	1.1641	0.00066736	0.10508	6.0242E-05	573.2799003027005	80.774	1.6488	80.836	80.479	82.128	0.062233					105	38	5	0	0	0	0.0030376	7	7917	7898;7906;7917;7928;7940;7953;7967		139.97	55.055	1	1844800			67161	8381	44637	44656	76452;76453;76454;76455;76456;76457;76458	76454					-0.022413829964762044
YVDPQFLTY	9	Unmodified	_YVDPQFLTY_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;ENSG00000181191|ENST00000374571|PJA1;nc|ENSG00000181191|Q8NG27|PJA1	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	573.2791137695312	2	573.279315	1144.54408	0.51777	0.00029682	-0.34871	-0.00019991	0.16905	9.6914E-05	573.2790356801917	80.849	1.911	80.79	80.42	82.331	-0.059692					101	44	5	0	0	0	2.4207E-08	8	8132	8112;8121;8132;8144;8154;8167;8180;8192		158.07	70.795	1	1985000			67162	8381	44637	44656	76459;76460;76461;76462;76463;76464;76465;76466	76461					-0.022413829964762044
YVDPQFLTY	9	Unmodified	_YVDPQFLTY_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;ENSG00000181191|ENST00000374571|PJA1;nc|ENSG00000181191|Q8NG27|PJA1	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	573.2793579101562	2	573.279315	1144.54408	0.64457	0.00036952	-0.64542	-0.00037	-0.00084801	-4.8615E-07	573.2788178941732	80.647	1.4478	80.703	80.315	81.763	0.055916					92	33	5	0	0	0	0.0010652	7	7990	7980;7990;8002;8014;8026;8038;8058		145.16	54.379	1	1928300			67163	8381	44637	44656	76467;76468;76469;76470;76471;76472;76473	76468					-0.022413829964762044
YVDPQFLTY	9	Unmodified	_YVDPQFLTY_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;ENSG00000181191|ENST00000374571|PJA1;nc|ENSG00000181191|Q8NG27|PJA1	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	573.2804565429688	2	573.279315	1144.54408	0.5512	0.00031599	-0.12159	-6.9705E-05	0.42961	0.00024629	573.2791218710266	80.66	0.7316	80.797	80.448	81.18	0.13702					39	17	3	0	0	0	0.059135	3	7677	7677;7689;7702		104.06	41.949	1	266470			67164	8381	44637	44656	76474;76475;76476	76474					-0.022413829964762044
YVDPQFLTY	9	Unmodified	_YVDPQFLTY_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;ENSG00000181191|ENST00000374571|PJA1;nc|ENSG00000181191|Q8NG27|PJA1	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	573.2793579101562	2	573.279315	1144.54408	0.69233	0.0003969	-0.41225	-0.00023634	0.28008	0.00016056	573.2790104371446	80.622	0.69794	80.764	80.457	81.155	0.14153					40	17	3	0	0	0	0.096326	3	7691	7675;7691;7714		93.143	36.778	1	226090			67165	8381	44637	44656	76477;76478;76479	76478					-0.022413829964762044
YVDPQFLTY	9	Unmodified	_YVDPQFLTY_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;ENSG00000181191|ENST00000374571|PJA1;nc|ENSG00000181191|Q8NG27|PJA1	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	573.2792358398438	2	573.279315	1144.54408	-1.1177	-0.00064075	1.6408	0.00094061	0.52306	0.00029986	573.2801317907434	80.678	0.61303	80.783	80.465	81.078	0.10527					38	15	3	0	0	0	0.12688	4	7648	7639;7648;7659;7671		87.696	20.727	1	266610			67166	8381	44637	44656	76480;76481;76482;76483	76481					-0.022413829964762044
YVDPQFLTY	9	Unmodified	_YVDPQFLTY_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;ENSG00000181191|ENST00000374571|PJA1;nc|ENSG00000181191|Q8NG27|PJA1	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	573.279315	1144.54408	-0.53649	-0.00030756	0.57024	0.00032691	0.033745	1.9345E-05	573.2796547502436	80.321	0.59013	80.737	80.548	81.139	0.41621	-0.035474	0.00058463	NaN	158.07	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	145420			67167	8381	44637	44656							-0.022413829964762044
YVDPQFLTY	9	Unmodified	_YVDPQFLTY_					0	0	0		nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;ENSG00000181191|ENST00000374571|PJA1;nc|ENSG00000181191|Q8NG27|PJA1	nc|ENSG00000198961|O43164-2|PJA2	nc|ENSG00000198961|O43164-2|PJA2	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	573.279315	1144.54408	0.081022	4.6448E-05	0.69325	0.00039743	0.77427	0.00044388	573.2795182876204	80.246	0.42249	80.772	80.527	80.949	0.52677	-0.00044943	0.00072567	NaN	158.07	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	160710			67168	8381	44637	44656							-0.022413829964762044
YVDPVNKVL	9	Unmodified	_YVDPVNKVL_					0	0	0		nc|ENSG00000140992|O15530-4|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;ENSG00000140992|ENST00000342085|PDPK1	nc|ENSG00000140992|O15530-4|PDPK1	nc|ENSG00000140992|O15530-4|PDPK1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.7996826171875	2	523.797675	1045.5808	-0.28962	-0.0001517	-0.0090066	-4.7176E-06	-0.29863	-0.00015642	523.7974613692369	54.313	0.87762	54.898	54.543	55.421	0.58474					50	20	4	0	0	0	0.55097	1	5563	5563		49.442	3.4693	1	3443700			67169	4471	44638	44657	76484	76484					0.059829136200733046
YVEGSLVTHI	10	Unmodified	_YVEGSLVTHI_					0	0	0			REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	559.300048828125	2	559.298039	1116.58152	1.771	0.00099049	1.7368	0.00097137	3.5077	0.0019619	559.2989040472133	93.61	0.96521	94.051	93.437	94.402	0.44099					63	24	4	0	0	0	0.43769	2	11120	11120;11168		60.972	4.2509	1	1322200	+		67170	16368	44639	44658	76485;76486	76485					0.027897082691424657
YVETVSSL	8	Unmodified	_YVETVSSL_					0	0	0			REV__ENSG00000086570|ENST00000261800|FAT2	REV__ENSG00000086570|ENST00000261800|FAT2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	449.2314147949219	2	449.231833	896.449113	0.59617	0.00026782	-3.4126	-0.001533	-2.8164	-0.0012652	449.2302610410389	83.151	3.4859	83.298	82.027	85.513	0.14694					178	80	3	0	0	0	0.88915	1	8088	8088		35.201	6.9464	1	225870	+		67171	16912	44640	44659	76487	76487					-0.0032531646767210987
YVEVNDLTLTL	11	Unmodified	_YVEVNDLTLTL_					0	0	0		nc|ENSG00000127311|Q8NG08-2|HELB;ENSG00000127311|ENST00000247815|HELB	nc|ENSG00000127311|Q8NG08-2|HELB	nc|ENSG00000127311|Q8NG08-2|HELB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	640.3462524414062	2	640.342643	1278.67073	1.7548	0.0011237	4.4044	0.0028203	6.1592	0.003944	640.3452591668301	102.79	0.81303	103.02	102.65	103.47	0.22556					88	25	4	0	0	0	0.61774	1	12485	12485		42.396	4.5846	1	14025000			67172	3488	44641	44660	76488	76488					0.04254498437990151
YVFVGERF	8	Unmodified	_YVFVGERF_					0	0	0		nc|ENSG00000173585|P51686-2|CCR9;ENSG00000173585|ENST00000357632|CCR9	nc|ENSG00000173585|P51686-2|CCR9	nc|ENSG00000173585|P51686-2|CCR9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	509.7502746582031	2	508.763635	1015.51272	-0.69809	-0.00035516	3.3671	0.001713	2.669	0.0013579	509.26539197047805	45.682	0.47672	45.651	45.321	45.798	-0.031067					18	10	3	0	0	0	0.4196	1	3714	3714		29.15	11.785	1	51481			67173	6872	44642	44661	76489	76489					0.0055808876010132735
YVGKHIKHFPG	11	Unmodified	_YVGKHIKHFPG_					0	0	0			REV__ENSG00000172716|ENST00000685675|SLFN11	REV__ENSG00000172716|ENST00000685675|SLFN11	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.3610229492188	2	641.85639	1281.69823	1.7061	0.001095	3.3411	0.0021445	5.0471	0.0032395	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.72918	1	13183	13183		26.693	4.733	1	27133000	+		67174	21848	44643	44662	76490	76490					0.06864491279543472
YVGKQISHL	9	Unmodified	_YVGKQISHL_					0	0	0			REV__ENSG00000235631|ENST00000434824|RNF148	REV__ENSG00000235631|ENST00000434824|RNF148	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	522.7964477539062	2	522.795466	1043.57638	0.60427	0.00031591	-0.4962	-0.00025941	0.10807	5.6498E-05	522.7953135933902	57.532	0.87128	58.087	57.601	58.472	0.55513					50	21	3	0	0	0	0.69914	1	6008	6008		40.573	4.9543	1	1292800	+		67175	23783	44644	44663	76491	76491					0.056334491971938405
YVGKVSLLLFL	11	Unmodified	_YVGKVSLLLFL_					0	0	0		nc|ENSG00000204969|Q9Y5H9-2|PCDHA2	nc|ENSG00000204969|Q9Y5H9-2|PCDHA2	nc|ENSG00000204969|Q9Y5H9-2|PCDHA2	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	626.3906860351562	2	626.389199	1250.76385	-1.2033	-0.00075372	-2.7712	-0.0017359	-3.9745	-0.0024896	626.3871390536368	109.94	1.1883	109.95	109.68	110.87	0.0060501					79	40	3	0	0	0	0.73893	1	11743	11743		24.519	0.99649	1	879220			67176	15216	44645	44664	76492	76492					0.14849467681892747
YVGNPLRG	8	Unmodified	_YVGNPLRG_					0	0	0		ENSG00000107518|ENST00000355044|ATRNL1	ENSG00000107518|ENST00000355044|ATRNL1	ENSG00000107518|ENST00000355044|ATRNL1	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	438.2630310058594	2	438.240327	874.466101	0.19202	8.415E-05	0.30467	0.00013352	0.49668	0.00021767	438.24056631344564	40.168	0.22266	40.25	40.046	40.269	0.081345					8	5	2	0	0	0	0.4196	1	2516	2516		40.573	10.069	1	141050			67177	2347	44646	44665	76493	76493					0.023846489288075645
YVHDDGRVSY	10	Unmodified	_YVHDDGRVSY_					0	0	0		ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	ENSG00000130755|ENST00000597595|GMFG	ENSG00000130755|ENST00000597595|GMFG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	404.1877746582031	3	404.18776	1209.54145	1.1895	0.00048077	-1.1196	-0.00045252	0.069886	2.8247E-05	404.1872278227631	32.643	0.9385	32.77	32.332	33.27	0.12643					52	21	4	0	0	0	1.6727E-07	3	2306	2284;2293;2306		155.58	86.799	1	2110100			67178	3678	44647	44666	76494;76495;76496	76496					-0.054938384014121766
YVHDDGRVSY	10	Unmodified	_YVHDDGRVSY_					0	0	0		ENSG00000130755|ENST00000597595|GMFG;ENST00000601731.1_1_19:39819119-39826633:-|nuORF	ENSG00000130755|ENST00000597595|GMFG	ENSG00000130755|ENST00000597595|GMFG	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	404.1877746582031	3	404.18776	1209.54145	0.63405	0.00025627	-0.59481	-0.00024041	0.039238	1.586E-05	404.187477412357	32.559	0.93244	32.771	32.507	33.44	0.21168					52	21	4	0	0	0	0.018775	3	2305	2293;2305;2317		122.94	73.403	1	1936600			67179	3678	44647	44666	76497;76498;76499	76498					-0.054938384014121766
YVHKILVVIEP	11	Unmodified	_YVHKILVVIEP_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	437.2672424316406	3	437.267463	1308.78056	0.78044	0.00034126	-0.10112	-4.4216E-05	0.67932	0.00029704	437.26733211231357	49.246	1.5472	50.15	49.725	51.272	0.90424					125	37	5	0	0	0	0.76892	1	4859	4859		17.833	1.9125	1	5667400			67180	2851	44648	44667	76500	76500					0.13851968567882977
YVHVAALV	8	Unmodified	_YVHVAALV_					0	0	0		ENSG00000147251|ENST00000276202|DOCK11	ENSG00000147251|ENST00000276202|DOCK11	ENSG00000147251|ENST00000276202|DOCK11	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	436.25677490234375	2	436.255446	870.496338	1.8746	0.00081779	4.3682	0.0019057	6.2428	0.0027235	436.2573150739957	22.183	0.48426	22.126	21.777	22.261	-0.057203					31	19	2	0	0	0	0.4196	1	671	671		24.504	11.545	1	30200			67181	4892	44649	44668	76501	76501					0.05591007593989161
YVHVAALV	8	Unmodified	_YVHVAALV_					0	0	0		ENSG00000147251|ENST00000276202|DOCK11	ENSG00000147251|ENST00000276202|DOCK11	ENSG00000147251|ENST00000276202|DOCK11	MULTI-MATCH	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5		2	436.255446	870.496338	-1.6493	-0.00071953	7.2674	0.0031704	5.618	0.0024509	436.25868115302836	21.91	0.52168	21.959	21.702	22.224	0.048553	-0.083721	0.0017764	NaN	16.705	32	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45643			67182	4892	44649	44668							0.05591007593989161
YVIIAAAS	8	Unmodified	_YVIIAAAS_					0	0	0			REV__ENSG00000124209|ENST00000244040|RAB22A	REV__ENSG00000124209|ENST00000244040|RAB22A	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	404.23236083984375	2	404.234179	806.453805	-1.2204	-0.00049332	-1.5408	-0.00062286	-2.7612	-0.0011162	404.233458181143	85.25	3.7919	85.25	83.546	87.338	0					172	88	2	0	0	0	0.82464	1	8027	8027		21.702	0	1	2752600	+		67183	18570	44650	44669	76502	76502					0.042836124657469554
YVISVMGNL	9	Unmodified	_YVISVMGNL_					0	0	0		ENSG00000280314|ENST00000641662|OR8K3	ENSG00000280314|ENST00000641662|OR8K3	ENSG00000280314|ENST00000641662|OR8K3	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	499.25079345703125	2	498.265153	994.515753	-0.050115	-2.4971E-05	-0.3918	-0.00019522	-0.44191	-0.00022019	498.26472664895545	54.364	0.33373	54.771	54.699	55.032	0.40663					10	7	2	0	0	0	0.20789	1	5564	5564		40.778	18.818	1	119680			67184	9050	44651	44670	76503	76503					0.018275958226013245
YVKAAVDGSIV	11	Unmodified	_YVKAAVDGSIV_					0	0	0			REV__ENSG00000176597|ENST00000326505|B3GNT5	REV__ENSG00000176597|ENST00000326505|B3GNT5	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	561.3042602539062	2	561.313689	1120.61282	0.64954	0.00036459	-3.5472	-0.0019911	-2.8976	-0.0016265	561.3111530718345	55.875	0.60942	56.276	55.866	56.475	0.40102					24	15	2	0	0	0	0.60058	1	5695	5695		44.377	1.981	1	1178600	+		67185	22138	44652	44671	76504	76504					0.05734281303239186
YVKRAHAF	8	Unmodified	_YVKRAHAF_					0	0	0			REV__nc|ENSG00000101343|Q9BZJ0-3|CRNKL1	REV__nc|ENSG00000101343|Q9BZJ0-3|CRNKL1	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	496.9309387207031	2	496.277244	990.539935	-1.1649	-0.00057813	-0.53224	-0.00026414	-1.6972	-0.00084228	496.2767909300694	45.508	0.73243	45.977	45.641	46.374	0.46954					28	17	3	0	0	0	0.4196	1	4211	4211		35.201	10.697	1	327210	+		67186	29745	44653	44672	76505	76505					0.04428617091127762
YVLAAVIYW	9	Unmodified	_YVLAAVIYW_					0	0	0			REV__chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	REV__chr2:42210457-42245505|17|14.06|0.16|6.43|+|0|TE_info:L1MC3,L1MC3_dup984,L1,LINE,donor,-,42209980,42210457|None,EML4|9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.8301391601562	2	549.305136	1096.59572	-1.9895	-0.0010928	-2.9146	-0.001601	-4.9041	-0.0026939	549.3034966596109	42.994	0.4832	43.691	43.463	43.947	0.69754					18	11	2	0	0	0	0.20789	1	3859	3859		29.842	0	1	435780	+		67187	15759	44654	44673	76506	76506					0.051284054880852636
YVLFKRFHR	9	Unmodified	_YVLFKRFHR_					0	0	0			REV__ENST00000429312.1_1_7:48942986-48943091:-|nuORF	REV__ENST00000429312.1_1_7:48942986-48943091:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	422.58172607421875	3	422.580375	1264.7193	2.2204	0.0009383	1.5886	0.00067133	3.8091	0.0016096	422.58094622121547	97.769	3.2395	97.714	96.802	100.04	-0.055542					208	75	4	0	0	0	0.7932	1	10565	10565		23.523	2.6855	1	525770	+		67188	26588	44655	44674	76507	76507					0.09752501379057321
YVLLRRHRHQT	11	Unmodified	_YVLLRRHRHQT_					0	0	0		nc|ENSG00000188687|Q9BY07-4|SLC4A5;nc|ENSG00000188687|Q9BY07-7|SLC4A5;nc|ENSG00000188687|Q9BY07-8|SLC4A5;ENST00000451608.2_1_2:74452054-74542150:-|nuORF;ENSG00000188687|ENST00000394019|SLC4A5;nc|ENSG00000188687|Q9BY07|SLC4A5;nc|ENSG00000188687|Q9BY07-2|SLC4A5;ENST00000483195.5_1_2:74452054-74512997:-|nuORF;nc|ENSG00000188687|Q9BY07-6|SLC4A5;nc|ENSG00000188687|Q9BY07-5|SLC4A5	nc|ENSG00000188687|Q9BY07-4|SLC4A5	nc|ENSG00000188687|Q9BY07-4|SLC4A5	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	493.6215515136719	3	493.619892	1477.83785	0.40491	0.00019987	2.0139	0.00099411	2.4188	0.001194	493.62080407624626	30.653	0.85216	30.651	30.205	31.057	-0.0022526					107	42	3	0	0	0	0.75779	1	1347	1347		20.315	6.229	1	258510			67189	15170	44656	44675	76508	76508					0.11804248616772384
YVLNGTFSL	9	Unmodified	_YVLNGTFSL_					0	0	0		ENSG00000136235|ENST00000258733|GPNMB;nc|ENSG00000136235|Q14956|GPNMB	ENSG00000136235|ENST00000258733|GPNMB	ENSG00000136235|ENST00000258733|GPNMB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	507.26629638671875	2	507.26875	1012.52295	1.6733	0.00084884	-3.9589	-0.0020082	-2.2856	-0.0011594	507.2673076437526	51.086	1.1107	51.838	51.491	52.601	0.75174					45	26	3	0	0	0	0.58668	1	5057	5057		47.657	0.8909	1	1853200			67190	4097	44657	44676	76509	76509					0.01718651694648088
YVLPSVRKFV	10	Unmodified	_YVLPSVRKFV_					0	0	0		nc|ENSG00000125166|P00505-2|GOT2	nc|ENSG00000125166|P00505-2|GOT2	nc|ENSG00000125166|P00505-2|GOT2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	604.366455078125	2	604.363516	1206.71248	3.2045	0.0019367	1.6316	0.00098609	4.8361	0.0029228	604.3644046044215	104.71	3.6555	104.67	103.89	107.54	-0.04039					426	86	7	0	0	0	0.86446	1	11835	11835		32.812	8.2932	1	63446000			67191	14892	44658	44677	76510	76510					0.11739143707836774
YVLPSVRKFV	10	Unmodified	_YVLPSVRKFV_					0	0	0		nc|ENSG00000125166|P00505-2|GOT2	nc|ENSG00000125166|P00505-2|GOT2	nc|ENSG00000125166|P00505-2|GOT2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	604.3661499023438	2	604.363516	1206.71248	2.3603	0.0014265	2.8185	0.0017034	5.1787	0.0031298	604.3651252382717	104.28	2.7256	104.47	103.97	106.7	0.18887					292	81	7	0	0	0	0.86549	1	12780	12780		31.53	2.3803	1	5984800			67192	14892	44658	44677	76511	76511					0.11739143707836774
YVLPVLLAM	9	Unmodified	_YVLPVLLAM_					0	0	0			REV__ENST00000533444.1_1_8:145150729-145152236:+|nuORF	REV__ENST00000533444.1_1_8:145150729-145152236:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	509.8035583496094	2	509.803914	1017.59328	-0.38176	-0.00019462	-0.061773	-3.1492E-05	-0.44354	-0.00022612	509.8038190020261	84.209	2.7097	84.385	82.814	85.524	0.17561					184	62	4	0	0	0	0.78292	1	8108	8108		29.842	4.3914	1	948010	+		67193	22314	44659	44678	76512	76512					0.08518233758763927
YVLPVLLAM	9	Unmodified	_YVLPVLLAM_					0	0	0			REV__ENST00000533444.1_1_8:145150729-145152236:+|nuORF	REV__ENST00000533444.1_1_8:145150729-145152236:+|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	509.80413818359375	2	509.803914	1017.59328	0.66528	0.00033916	-1.14	-0.00058119	-0.47475	-0.00024203	509.80330176373235	84.326	2.5006	84.474	83.057	85.557	0.14794					163	57	4	0	0	0	0.78292	1	8351	8351		29.842	0	1	928020	+		67194	22314	44659	44678	76513	76513					0.08518233758763927
YVLRIDVLN	9	Unmodified	_YVLRIDVLN_					0	0	0		nc|ENSG00000159398|Q6NT32-4|CES5A	nc|ENSG00000159398|Q6NT32-4|CES5A	nc|ENSG00000159398|Q6NT32-4|CES5A	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	552.8235473632812	2	552.824224	1103.63389	-1.0859	-0.00060033	1.3549	0.00074901	0.26894	0.00014868	552.8247634918083	77.88	0.86649	77.972	77.698	78.564	0.091438					80	32	4	0	0	0	0.77244	1	7269	7269		32.812	2.4947	1	542910			67195	15033	44660	44679	76514	76514					0.08622291402753035
YVLSEAPGEPP	11	Unmodified	_YVLSEAPGEPP_					0	0	0		ENSG00000172273|ENST00000350777|HINFP;ENST00000527755.5_1_11:119003111-119005205:+|nuORF	ENSG00000172273|ENST00000350777|HINFP	ENSG00000172273|ENST00000350777|HINFP	MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	579.7957153320312	2	579.787504	1157.56045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.428	1	22.516	22.016	23.016	0.088013								0	0	0	0.56276	1	678	678		25.574	0	1				67196	6758	44661	44680	76515	76515					-0.012023018303807476
YVLSMLPVPP	10	Unmodified	_YVLSMLPVPP_					0	0	0		nc|ENSG00000137075|Q9H0F5-5|RNF38;nc|ENSG00000137075|Q9H0F5-3|RNF38;nc|ENSG00000137075|Q9H0F5-4|RNF38;nc|ENSG00000137075|Q9H0F5-2|RNF38;ENSG00000137075|ENST00000259605|RNF38	nc|ENSG00000137075|Q9H0F5-5|RNF38	nc|ENSG00000137075|Q9H0F5-5|RNF38	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	558.3135986328125	2	558.312103	1114.60965	-0.013297	-7.4238E-06	0.088895	4.9631E-05	0.075598	4.2207E-05	558.3123635261824	48.197	1.178	48.104	47.807	48.985	-0.093178					36	28	2	0	0	0	0.86452	1	3665	3665		30.504	3.7075	1	142070			67197	4169	44662	44681	76516	76516					0.056933149248834525
YVLSTVSA	8	Unmodified	_YVLSTVSA_					0	0	0			REV__ENST00000462039.5_1_6:74176003-74176057:+|nuORF	REV__ENST00000462039.5_1_6:74176003-74176057:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	420.2273254394531	2	420.229094	838.443634	-1.3082	-0.00054975	-1.524	-0.00064043	-2.8322	-0.0011902	420.2283579595478	79.245	4.2358	79.245	77.692	81.928	0					327	157	3	0	0	0	0.86791	3	7317	7317;7402;7417		35.201	9.7505	1	419890	+		67198	27042	44663	44682	76517;76518;76519	76517					0.017950047405179248
YVLSTVSA	8	Unmodified	_YVLSTVSA_					0	0	0			REV__ENST00000462039.5_1_6:74176003-74176057:+|nuORF	REV__ENST00000462039.5_1_6:74176003-74176057:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	420.2276611328125	2	420.229094	838.443634	-0.18765	-7.8855E-05	-2.6467	-0.0011122	-2.8344	-0.0011911	420.2278813568292	78.881	5.7417	78.937	77.46	83.202	0.056122					362	169	3	0	0	0	0.86791	1	7698	7698		28.254	0.37203	1	743780	+		67199	27042	44663	44682	76520	76520					0.017950047405179248
YVLSTVSA	8	Unmodified	_YVLSTVSA_					0	0	0			REV__ENST00000462039.5_1_6:74176003-74176057:+|nuORF	REV__ENST00000462039.5_1_6:74176003-74176057:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	420.2275695800781	2	420.229094	838.443634	0.089833	3.775E-05	-2.9174	-0.001226	-2.8276	-0.0011882	420.22775475785926	78.748	5.9252	78.695	77.414	83.339	-0.053551					442	172	4	0	0	0	0.88915	1	7952	7952		35.201	0	1	888480	+		67200	27042	44663	44682	76521	76521					0.017950047405179248
YVLVAVVSVVL	11	Unmodified	_YVLVAVVSVVL_					0	0	0			REV__nc|ENSG00000136869|O00206-3|TLR4	REV__nc|ENSG00000136869|O00206-3|TLR4	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	580.8644409179688	2	580.8681	1159.72165	-0.90141	-0.0005236	-2.6241	-0.0015243	-3.5255	-0.0020479	580.8664133180667	77.399	0.79443	77.805	77.388	78.183	0.40531					36	18	3	0	0	0	0.72918	1	8802	8802		26.693	1.1189	1	478730	+		67201	19343	44664	44683	76522	76522					0.14817492273527932
YVLVAVVSVVL	11	Unmodified	_YVLVAVVSVVL_					0	0	0			REV__nc|ENSG00000136869|O00206-3|TLR4	REV__nc|ENSG00000136869|O00206-3|TLR4	MULTI-MATCH-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		2	580.8681	1159.72165	-0.90141	-0.0005236	-2.6241	-0.0015243	-3.5255	-0.0020479	580.8664133180667	77.399	0.79443	77.805	77.388	78.183	0.40531	0.00055991	0.00026814	NaN	26.693	36	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	478730	+		67202	19343	44664	44683							0.14817492273527932
YVLVAVVSVVL	11	Unmodified	_YVLVAVVSVVL_					0	0	0			REV__nc|ENSG00000136869|O00206-3|TLR4	REV__nc|ENSG00000136869|O00206-3|TLR4	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	580.8681	1159.72165	-0.71219	-0.00041369	-3.2338	-0.0018784	-3.946	-0.0022921	580.8662958712084	77.235	0.64699	77.803	77.532	78.179	0.56836	-0.00055991	-0.00044014	NaN	26.693	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	368090	+		67203	19343	44664	44683							0.14817492273527932
YVLVRVQPPQ	10	Unmodified	_YVLVRVQPPQ_					0	0	0		nc|ENSG00000100918|O95072-2|REC8;ENSG00000100918|ENST00000611366|REC8	nc|ENSG00000100918|O95072-2|REC8	nc|ENSG00000100918|O95072-2|REC8	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	599.510498046875	2	599.850773	1197.68699	0.49436	0.00029654	0.95249	0.00057135	1.4468	0.00086789	600.3554325321463	37.816	0.35632	37.758	37.647	38.004	-0.057915					14	12	2	0	0	0	0.37624	1	2204	2204		15.642	0	1	113340			67204	1884	44665	44684	76523	76523					0.0960566918540735
YVNVQQLFD	9	Unmodified	_YVNVQQLFD_					0	0	0			REV__nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	REV__nc|ENSG00000083807|Q9Y2P5-2|SLC27A5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	562.7972412109375	2	563.282389	1124.55022	1.7798	0.0010026	-1.646	-0.00092718	0.13381	7.5371E-05	563.2815378114683	95.738	0.48942	96.158	95.825	96.315	0.42051					17	11	2	0	0	0	0.20789	1	11413	11413		31.955	6.5047	1	143490	+		67205	16862	44666	44685	76524	76524					-0.007068647649475679
YVPAGVSIRY	10	Unmodified	_YVPAGVSIRY_					0	0	0			REV__chr10:70093845-70109033|56|16.41|0.8|4.36|+|ENST00000677881|MACROH2A2,MACROH2A2	REV__chr10:70093845-70109033|56|16.41|0.8|4.36|+|ENST00000677881|MACROH2A2,MACROH2A2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	562.8057250976562	2	562.808574	1123.60259	-1.1725	-0.00065991	-2.1222	-0.0011944	-3.2947	-0.0018543	562.8072126493548	34.141	0.63573	34.136	33.818	34.454	-0.0047417					21	14	2	0	0	0	0.86718	1	2028	2028		27.882	1.1893	1	54821	+		67206	15479	44667	44686	76525	76525					0.04573718368646951
YVRELYTV	8	Unmodified	_YVRELYTV_					0	0	0		nc|ENSG00000101977|P10911-6|MCF2;nc|ENSG00000101977|P10911-2|MCF2;nc|ENSG00000101977|P10911|MCF2;nc|ENSG00000101977|P10911-4|MCF2;nc|ENSG00000101977|P10911-3|MCF2;ENSG00000101977|ENST00000519895|MCF2	nc|ENSG00000101977|P10911-6|MCF2	nc|ENSG00000101977|P10911-6|MCF2	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	521.781982421875	2	521.782025	1041.5495	-0.36396	-0.00018991	-0.15338	-8.0029E-05	-0.51734	-0.00026994	521.781827522837	48.002	1.084	48.925	48.503	49.587	0.92315					72	26	4	0	0	0	0.93786	1	4615	4615		53.351	1.0523	1	8503600			67207	1977	44668	44687	76526	76526					0.030383405859765844
YVRHRRHLRPK	11	Unmodified	_YVRHRRHLRPK_					0	0	0			REV__ENSG00000143436|ENST00000368830|MRPL9	REV__ENSG00000143436|ENST00000368830|MRPL9	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	506.77130126953125	3	506.639398	1516.89637	0.44973	0.00022785	0.11647	5.9007E-05	0.5662	0.00028686	506.6395756992188	17.224	0.53662	16.742	16.579	17.115	-0.48256					18	11	2	0	0	0	0.18372	1	217	217		3.4087	0	1	65175	+		67208	19809	44669	44688	76527	76527					0.15859349981906234
YVRHRRHLRPK	11	Unmodified	_YVRHRRHLRPK_					0	0	0			REV__ENSG00000143436|ENST00000368830|MRPL9	REV__ENSG00000143436|ENST00000368830|MRPL9	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		3	506.639398	1516.89637	1.0864	0.00055041	-0.46478	-0.00023548	0.62162	0.00031493	506.6390950768594	17.34	0.45219	16.729	16.52	16.972	-0.6107	-0.0063991	-0.00044393	NaN	6.001	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105660	+		67209	19809	44669	44688							0.15859349981906234
YVRRELLR	8	Unmodified	_YVRRELLR_					0	0	0		ENSG00000179913|ENST00000318683|B3GNT3	ENSG00000179913|ENST00000318683|B3GNT3	ENSG00000179913|ENST00000318683|B3GNT3	MULTI-SECPEP	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	553.8303833007812	2	552.835457	1103.65636	-0.64058	-0.00035413	-2.0435	-0.0011297	-2.684	-0.0014838	553.3357745009254	89.303	1.1243	89.303	88.874	89.999	0					33	25	2	0	0	0	0.4196	1	8661	8661		30.504	0	1	39229			67210	7303	44670	44689	76528	76528					0.10867935591022615
YVSIRLLNHV	10	Unmodified	_YVSIRLLNHV_					0	0	0			REV__ENST00000561685.1_1_16:15168568-15177423:-|nuORF	REV__ENST00000561685.1_1_16:15168568-15177423:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	405.23980712890625	3	405.239907	1212.69789	2.8569	0.0011577	-1.9282	-0.00078139	0.92871	0.00037635	405.2390473180589	103.36	0.5413	103.59	103.42	103.96	0.22556					22	12	2	0	0	0	0.86621	1	12566	12566		26.063	0.9374	1	942410	+		67211	16896	44671	44690	76529	76529					0.10005071559703538
YVSPASVC	8	Unmodified	_YVSPASVC_					0	0	0			REV__ENSG00000150456|ENST00000382758|EEF1AKMT1	REV__ENSG00000150456|ENST00000382758|EEF1AKMT1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	413.194091796875	2	413.194196	824.37384	0.83061	0.0003432	-2.9498	-0.0012188	-2.1192	-0.00087562	413.1932909391075	85.831	2.7525	85.757	84.67	87.423	-0.073761					147	63	4	0	0	0	0.86791	1	8824	8824		28.254	0	1	1300900	+		67212	20210	44672	44691	76530	76530					-0.0453719719973833
YVSPASVC	8	Unmodified	_YVSPASVC_					0	0	0			REV__ENSG00000150456|ENST00000382758|EEF1AKMT1	REV__ENSG00000150456|ENST00000382758|EEF1AKMT1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	413.1944885253906	2	413.194196	824.37384	-1.8193	-0.00075172	0.10384	4.2906E-05	-1.7155	-0.00070882	413.19449532095985	85.285	2.7275	85.47	84.411	87.139	0.18523					148	63	4	0	0	0	0.86791	1	8332	8332		28.254	0	1	1914300	+		67213	20210	44672	44691	76531	76531					-0.0453719719973833
YVSVDHWQKE	10	Unmodified	_YVSVDHWQKE_					0	0	0			REV__ENSG00000130783|ENST00000253079|CCDC62	REV__ENSG00000130783|ENST00000253079|CCDC62	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	645.81396484375	2	645.809302	1289.60405	1.0677	0.00068953	3.8054	0.0024576	4.8731	0.0031471	645.811490367663	25.892	0.38939	25.916	25.783	26.173	0.024021					37	17	3	0	0	0	0.57924	1	966	966		51.193	1.7511	1	116810	+		67214	18909	44673	44692	76532	76532					-0.029166923332468286
YVTSLIGNIG	10	Unmodified	_YVTSLIGNIG_					0	0	0		nc|ENSG00000181282|Q8NH89|OR5AK3P	nc|ENSG00000181282|Q8NH89|OR5AK3P	nc|ENSG00000181282|Q8NH89|OR5AK3P	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	518.810302734375	2	518.787307	1035.56006	1.9428	0.0010079	4.3197	0.002241	6.2625	0.0032489	518.789929081108	98.352	0.53815	98.714	98.317	98.855	0.36136					17	12	2	0	0	0	0.37624	1	11842	11842		40.778	0	1	104440			67215	15133	44674	44693	76533	76533					0.04370323240414109
YVVDLDDEY	9	Unmodified	_YVVDLDDEY_					0	0	0		ENSG00000113141|ENST00000417647|IK	ENSG00000113141|ENST00000417647|IK	ENSG00000113141|ENST00000417647|IK	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	565.7473754882812	2	565.748044	1129.48154	-0.77415	-0.00043798	1.1977	0.00067759	0.42354	0.00023961	565.7486276008264	72.404	0.87166	72.79	72.417	73.289	0.38582					53	20	4	0	0	0	0.15928	1	8084	8084		82.305	37.928	1	914190			67216	2700	44675	44694	76534	76534					-0.07802573855337869
YVVDLDDEY	9	Unmodified	_YVVDLDDEY_					0	0	0		ENSG00000113141|ENST00000417647|IK	ENSG00000113141|ENST00000417647|IK	ENSG00000113141|ENST00000417647|IK	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9		2	565.748044	1129.48154	0.63254	0.00035786	-0.21605	-0.00012223	0.41649	0.00023563	565.7478003340902	72.249	0.78555	72.799	72.483	73.269	0.55008	0.00466	-0.0007604	NaN	82.305	49	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1056400			67217	2700	44675	44694							-0.07802573855337869
YVVEFEVLVY	10	Unmodified	_YVVEFEVLVY_					0	0	0			REV__ENSG00000124721|ENST00000327475|DNAH8	REV__ENSG00000124721|ENST00000327475|DNAH8	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	420.5569152832031	3	420.55679	1258.64854	1.0147	0.00042676	-0.13564	-5.7046E-05	0.8791	0.00036971	420.5565618577987	23.631	0.56009	23.249	22.973	23.533	-0.38178					29	12	3	0	0	0	0.86471	1	1053	1053		30.318	1.1477	1	151820	+		67218	18606	44676	44695	76535	76535					0.029563187602434482
YVVQTSRFHPQ	11	Unmodified	_YVVQTSRFHPQ_					0	0	0		ENST00000540753.5_1_9:125132965-125133037:+|nuORF	ENST00000540753.5_1_9:125132965-125133037:+|nuORF	ENST00000540753.5_1_9:125132965-125133037:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	454.572509765625	3	454.570204	1360.68878	0.3055	0.00013887	3.8889	0.0017678	4.1944	0.0019067	454.57182177352536	29.047	0.39498	29.077	28.848	29.243	0.030945					24	15	2	0	0	0	0.75121	1	1403	1403		21.78	0.94327	1	33629			67219	13507	44677	44696	76536	76536					0.02286678203381598
YWFREQRRRNG	11	Unmodified	_YWFREQRRRNG_					0	0	0			REV__nc|ENSG00000062598|Q96JJ3-3|ELMO2	REV__nc|ENSG00000062598|Q96JJ3-3|ELMO2	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.6046752929688	3	523.271152	1566.79163	0.82103	0.00042962	-1.8729	-0.00098002	-1.0518	-0.0005504	523.2701389305565	28.243	0.79571	28.22	27.911	28.706	-0.023556					50	18	4	0	0	0	0.76892	1	1342	1342		17.833	7.7292	1	183100	+		67220	16464	44678	44697	76537	76537					0.030901837146757316
YWFREQRRRNG	11	Unmodified	_YWFREQRRRNG_					0	0	0			REV__nc|ENSG00000062598|Q96JJ3-3|ELMO2	REV__nc|ENSG00000062598|Q96JJ3-3|ELMO2	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.6046752929688	3	523.271152	1566.79163	0.82103	0.00042962	-1.8729	-0.00098002	-1.0518	-0.0005504	523.2701389305565	28.243	0.79571	28.22	27.911	28.706	-0.023556					50	18	4	0	0	0	0.17729	1	1342	1342		17.833	8.6213	1	183100	+		67221	16464	44678	44697	76538	76538					0.030901837146757316
YWIKKLGNSL	10	Unmodified	_YWIKKLGNSL_					0	0	0			REV__ENST00000371377.3_1_1:54389572-54394098:-|nuORF	REV__ENST00000371377.3_1_1:54389572-54394098:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	611.3568115234375	2	611.353148	1220.69174	2.4219	0.0014807	2.8207	0.0017244	5.2426	0.0032051	611.3549284748859	96.013	5.0179	95.956	95.022	100.04	-0.056442					432	117	6	0	0	0	0.85981	1	10372	10372		35.152	5.982	1	12656000	+		67222	25685	44679	44698	76539	76539					0.09022553328190952
YWKTIKAQRWF	11	Unmodified	_YWKTIKAQRWF_					0	0	0		ENST00000370384.7_1_6:74019690-74019876:-|nuORF	ENST00000370384.7_1_6:74019690-74019876:-|nuORF	ENST00000370384.7_1_6:74019690-74019876:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	509.9495849609375	3	509.613744	1525.8194	-1.755	-0.00089438	3.7542	0.0019132	1.9992	0.0010188	509.61555556193184	28.54	1.0683	28.54	27.927	28.995	0					107	46	3	0	0	0	0.74022	1	1206	1206		24.232	6.3987	1	157640			67223	10635	44680	44699	76540	76540					0.07752693922202525
YWLFAREHPQH	11	Unmodified	_YWLFAREHPQH_					0	0	0		ENSG00000111252|ENST00000341259|SH2B3	ENSG00000111252|ENST00000341259|SH2B3	ENSG00000111252|ENST00000341259|SH2B3	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	495.5827331542969	3	495.245832	1482.71567	0.055762	2.7616E-05	3.8754	0.0019193	3.9312	0.0019469	495.24758409994	17.57	0.18978	16.96	16.844	17.034	-0.6107					9	4	3	0	0	0	0.74405	1	282	282		23.378	5.5448	1	49616			67224	2563	44681	44700	76541	76541					-0.006382131854479667
YWRRWNRFCRR	11	Unmodified	_YWRRWNRFCRR_					0	0	0		nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C	nc|ENSG00000151067|Q13936-17|CACNA1C	nc|ENSG00000151067|Q13936-17|CACNA1C	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	424.5605163574219	4	425.471926	1697.8586	-0.41635	-0.00017715	3.8344	0.0016314	3.4181	0.0014543	425.7242180433569	28.114	0.38668	28.017	27.707	28.094	-0.096947					10	8	2	0	0	0	0.1841	1	1649	1649		0.31226	0	1	24950			67225	5092	44682	44701	76542	76542					0.03758515724780409
YYAAMTFII	9	Oxidation (M)	_YYAAM(Oxidation (M))TFII_		YYAAM(1)TFII		YYAAM(53)TFII	0	0	1			REV__nc|ENSG00000196689|Q8NER1-3|TRPV1;REV__ENST00000572919.1_3_17:3488830-3495572:-|nuORF	REV__nc|ENSG00000196689|Q8NER1-3|TRPV1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	555.7767333984375	2	554.772811	1107.53107	-0.028196	-1.5642E-05	2.454	0.0013614	2.4258	0.0013458	554.7740138866297	78.16	2.3927	78.565	78.018	80.411	0.40531					136	56	5	0	0	0	0.47272	1	8879	8879		53.351	7.3995	1	4295800	+		67226	28966;23162	44683	44702	76543	76543		353			-0.01839537380215006
YYAKKILYYLR	11	Unmodified	_YYAKKILYYLR_					0	0	0		ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21;ENST00000549689.5_1_12:117612134-117624310:-|nuORF	ENSG00000135108|ENST00000622495|FBXO21	ENSG00000135108|ENST00000622495|FBXO21	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	498.6231689453125	3	498.622017	1492.84422	0.21444	0.00010693	1.9975	0.000996	2.2119	0.0011029	498.62281482057665	22.043	1.7711	21.6	20.78	22.551	-0.44324					90	40	3	0	0	0	0.78683	1	832	832		14.086	0	1	200640			67227	3984	44684	44703	76544	76544					0.11751329004960098
YYAKQNEDV	9	Unmodified	_YYAKQNEDV_					0	0	0			REV__nc|ENSG00000103222|P33527-8|ABCC1	REV__nc|ENSG00000103222|P33527-8|ABCC1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	565.26220703125	2	565.261653	1128.50875	-0.29026	-0.00016407	2.5452	0.0014387	2.2549	0.0012746	565.2629052422653	42.198	0.98447	42.202	41.912	42.897	0.0034142					41	23	3	0	0	0	0.28163	1	3188	3188		66.429	22.052	1	546820	+		67228	17396	44685	44704	76545	76545					-0.050360455242980606
YYANSDLYS	9	Unmodified	_YYANSDLYS_					0	0	0		nc|ENSG00000170615|P58743-2|SLC26A5;nc|ENSG00000170615|P58743-5|SLC26A5;nc|ENSG00000170615|P58743-6|SLC26A5;ENSG00000170615|ENST00000306312|SLC26A5	nc|ENSG00000170615|P58743-2|SLC26A5	nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.2147216796875	2	548.235104	1094.45566	-0.54938	-0.00030119	-3.1395	-0.0017212	-3.6888	-0.0020223	548.2330612330338	54.332	0.46198	54.917	54.749	55.211	0.58474					16	10	2	0	0	0	0.20789	1	5582	5582		55.504	10.973	1	237650			67229	6604	44686	44705	76546	76546					-0.08779423306964418
YYCAGNFGSN	10	Unmodified	_YYCAGNFGSN_					0	0	0		ENST00000505047.1_1_Y:20981302-20981584:-|nuORF	ENST00000505047.1_1_Y:20981302-20981584:-|nuORF	ENST00000505047.1_1_Y:20981302-20981584:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.2157592773438	2	548.213649	1094.41274	-0.39829	-0.00021835	3.5488	0.0019455	3.1505	0.0017271	548.215399094276	54.61	0.79925	55.178	54.901	55.7	0.56836					40	18	3	0	0	0	0.80179	1	5607	5607		39.253	3.6345	1	1612500			67230	12916	44687	44706	76547	76547					-0.13068516636008098
YYDALCSGEIC	11	Unmodified	_YYDALCSGEIC_					0	0	0		ENST00000463543.5_1_1:151143496-151146942:-|nuORF;ENSG00000163157|ENST00000295314|TMOD4	ENST00000463543.5_1_1:151143496-151146942:-|nuORF	ENST00000463543.5_1_1:151143496-151146942:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	618.7515258789062	2	618.749207	1235.48386	0.45782	0.00028327	-0.71469	-0.00044222	-0.25688	-0.00015894	618.7486514579181	75.931	0.70183	76.326	76.035	76.737	0.39507					35	16	3	0	0	0	0.5603	1	8596	8596		47.657	10.498	1	661980			67231	5772	44688	44707	76548	76548					-0.12446184713530783
YYDALCSGEIC	11	Unmodified	_YYDALCSGEIC_					0	0	0		ENST00000463543.5_1_1:151143496-151146942:-|nuORF;ENSG00000163157|ENST00000295314|TMOD4	ENST00000463543.5_1_1:151143496-151146942:-|nuORF	ENST00000463543.5_1_1:151143496-151146942:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	618.7495727539062	2	618.749207	1235.48386	0.49185	0.00030433	-0.10645	-6.5867E-05	0.3854	0.00023847	618.7488737645657	75.783	0.86041	76.351	76.068	76.929	0.56836					41	20	4	0	0	0	0.6921	1	8607	8607		32.812	2.4947	1	578420			67232	5772	44688	44707	76549	76549					-0.12446184713530783
YYDALPIV	8	Unmodified	_YYDALPIV_					0	0	0			REV__ENST00000554870.5_1_14:71059985-71067354:-|nuORF	REV__ENST00000554870.5_1_14:71059985-71067354:-|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	477.7550048828125	2	477.252569	952.490584	0.99759	0.0004761	-3.5515	-0.001695	-2.5539	-0.0012189	477.250683910307	17.966	0.22371	18.042	17.937	18.16	0.075441					10	6	2	0	0	0	0.4196	1	247	247		20.482	0	1	26033	+		67233	19108	44689	44708	76550	76550					0.012438642916663412
YYDVAKILI	9	Unmodified	_YYDVAKILI_					0	0	0		ENSG00000101745|ENST00000262126|ANKRD12;nc|ENSG00000101745|Q6UB98-2|ANKRD12;ENST00000540578.6_1_18:9182415-9235682:+|nuORF	ENSG00000101745|ENST00000262126|ANKRD12	ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	549.3167114257812	2	549.3157	1096.61685	-0.53909	-0.00029613	0.6684	0.00036716	0.1293	7.1028E-05	549.3158913704307	77.451	0.75821	77.856	77.465	78.223	0.4053					32	17	3	0	0	0	0.48102	1	8819	8819		52.937	5.0211	1	501590			67234	1956	44690	44709	76551	76551					0.07240370796944262
YYDVAKILI	9	Unmodified	_YYDVAKILI_					0	0	0		ENSG00000101745|ENST00000262126|ANKRD12;nc|ENSG00000101745|Q6UB98-2|ANKRD12;ENST00000540578.6_1_18:9182415-9235682:+|nuORF	ENSG00000101745|ENST00000262126|ANKRD12	ENSG00000101745|ENST00000262126|ANKRD12	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	549.3161010742188	2	549.3157	1096.61685	-0.2101	-0.00011541	-0.35364	-0.00019426	-0.56373	-0.00030967	549.3154902194675	77.324	0.56374	77.892	77.575	78.139	0.56836					24	12	3	0	0	0	0.48102	2	8828	8828;8840		52.937	17.891	1	516330			67235	1956	44690	44709	76552;76553	76552					0.07240370796944262
YYEMLTIL	8	Unmodified	_YYEMLTIL_					0	0	0			REV__nc|ENSG00000164944|Q69YN4-3|VIRMA	REV__nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.3034057617188	2	523.267361	1044.52017	-0.04141	-2.1669E-05	0.86063	0.00045034	0.81922	0.00042867	523.2671441938604	88.994	0.56729	89.062	88.516	89.083	0.068161					17	13	2	0	0	0	0.4196	1	9022	9022		19.36	0	1	64782	+		67236	29995	44691	44710	76554	76554					-0.00030939754492465
YYEVIIVRVE	10	Unmodified	_YYEVIIVRVE_					0	0	0		nc|ENSG00000186318|P56817-6|BACE1;nc|ENSG00000186318|P56817-5|BACE1;nc|ENSG00000186318|P56817-4|BACE1;nc|ENSG00000186318|P56817-3|BACE1;nc|ENSG00000186318|P56817-2|BACE1;ENSG00000186318|ENST00000313005|BACE1	nc|ENSG00000186318|P56817-6|BACE1	nc|ENSG00000186318|P56817-6|BACE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	642.36279296875	2	641.855721	1281.69689	1.7061	0.001095	4.3829	0.0028132	6.089	0.0039082	642.3605384886841	112.84	7.2978	112.87	112.73	120.03	0.028854					792	247	5	0	0	0	0.85981	1	13150	13150		35.152	11.629	1	27133000			67237	7791	44692	44711	76555	76555					0.06730812400155628
YYFILLTL	8	Unmodified	_YYFILLTL_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3034057617188	2	523.302062	1044.58957	1.1688	0.00061163	1.6837	0.00088109	2.8525	0.0014927	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.884	1	9386	9386		33.516	0.70317	1	12580000	+		67238	22881	44693	44712	76556	76556					0.06905887256561982
YYFILLTL	8	Unmodified	_YYFILLTL_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	523.3035278320312	2	523.302062	1044.58957	-0.17027	-8.9103E-05	3.181	0.0016646	3.0107	0.0015755	523.3036223327587	91.376	2.6869	91.596	91.26	93.946	0.22013					111	63	2	0	0	0	0.88915	1	9169	9169		35.201	0.04869	1	1188800	+		67239	22881	44693	44712	76557	76557					0.06905887256561982
YYFILLTL	8	Unmodified	_YYFILLTL_					0	0	0			REV__ENSG00000186815|ENST00000335509|TPCN1	REV__ENSG00000186815|ENST00000335509|TPCN1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	523.3033447265625	2	523.302062	1044.58957	0.69703	0.00036476	1.9822	0.0010373	2.6792	0.001402	523.3029652665699	86.478	2.9907	86.627	84.691	87.681	0.14902					279	69	5	0	0	0	0.86288	2	8643	8547;8643		33.516	7.9415	1	3801600	+		67240	22881	44693	44712	76558;76559	76559					0.06905887256561982
YYFLNKKFI	9	Unmodified	_YYFLNKKFI_					0	0	0			REV__ENST00000495897.2_1_10:75227245-75231333:-|nuORF	REV__ENST00000495897.2_1_10:75227245-75231333:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	618.3463745117188	2	618.344792	1234.67503	-0.32375	-0.00020019	2.1713	0.0013426	1.8475	0.0011424	618.3460231996615	97.998	3.2978	98.055	97.163	100.46	0.056839					213	76	4	0	0	0	0.7932	1	10434	10434		26.796	0.73272	1	926440	+		67241	27745	44694	44713	76560	76560					0.06708052442240842
YYFYEYGF	8	Unmodified	_YYFYEYGF_					0	0	0		nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR;ENSG00000163946|ENST00000683822|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	577.125732421875	2	576.239658	1150.46476	-0.5751	-0.0003314	3.0143	0.001737	2.4392	0.0014056	576.2412581993048	70.738	0.54914	70.701	70.457	71.006	-0.037857					45	27	2	0	0	0	0.4196	1	6893	6893		28.254	2.6802	1	291680			67242	5890	44695	44714	76561	76561					-0.10445029950619755
YYGKIRVKD	9	Unmodified	_YYGKIRVKD_					0	0	0			REV__ENSG00000134962|ENST00000257408|KLB	REV__ENSG00000134962|ENST00000257408|KLB	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	571.3213500976562	2	571.321848	1140.62914	-0.37115	-0.00021205	0.23852	0.00013627	-0.13263	-7.5772E-05	571.321732381747	64.551	0.91113	64.937	64.482	65.393	0.38615					59	21	4	0	0	0	0.76764	1	6990	6990		34.173	2.5383	1	927120	+		67243	19179	44696	44715	76562	76562					0.0644540725998013
YYGQKLGLTK	10	Unmodified	_YYGQKLGLTK_					0	0	0		nc|ENSG00000171456|Q8IXJ9-2|ASXL1;ENSG00000171456|ENST00000375687|ASXL1	nc|ENSG00000171456|Q8IXJ9-2|ASXL1	nc|ENSG00000171456|Q8IXJ9-2|ASXL1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	585.8302001953125	2	585.829506	1169.64446	-0.75039	-0.0004396	1.9492	0.0011419	1.1988	0.00070232	585.8305676475687	57.715	1.3345	57.701	57.24	58.574	-0.013641					81	46	2	0	0	0	0.86587	1	5295	5295		29.17	0	1	146910			67244	6666	44697	44716	76563	76563					0.06642274057162467
YYGQSFCGN	9	Carbamidomethyl (C)	_YYGQSFC(Carbamidomethyl (C))GN_	YYGQSFC(1)GN		YYGQSFC(51)GN		0	1	0			REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF	REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	548.2152099609375	2	548.213649	1094.41274	-0.39829	-0.00021835	3.5488	0.0019455	3.1505	0.0017271	548.215399094276	54.61	0.79925	55.178	54.901	55.7	0.56836					40	18	3	0	0	0	0.51307	1	5593	5593		51.335	10.557	1	1612500	+		67245	22968	44698	44717	76564	76564	278				-0.13068516636030836
YYIFILIG	8	Unmodified	_YYIFILIG_					0	0	0			REV__ENST00000591863.1_2_19:33461934-33462189:-|nuORF	REV__ENST00000591863.1_2_19:33461934-33462189:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	501.2904357910156	2	501.288954	1000.56336	-0.06476	-3.2463E-05	3.0665	0.0015372	3.0017	0.0015047	501.2904004101985	86.692	5.7652	86.759	85.467	91.232	0.067444					467	135	5	0	0	0	0.88393	1	9121	9121		33.493	6.8001	1	9565500	+		67246	29205	44699	44718	76565	76565					0.06309618085106194
YYIFILIG	8	Unmodified	_YYIFILIG_					0	0	0			REV__ENST00000591863.1_2_19:33461934-33462189:-|nuORF	REV__ENST00000591863.1_2_19:33461934-33462189:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	501.29046630859375	2	501.288954	1000.56336	0.65623	0.00032896	2.1204	0.0010629	2.7767	0.0013919	501.2899176383908	84.293	3.1371	84.441	82.42	85.557	0.14794					232	72	5	0	0	0	0.84567	1	8259	8259		24.504	0.30126	1	2931000	+		67247	29205	44699	44718	76566	76566					0.06309618085106194
YYIFTLLL	8	Unmodified	_YYIFTLLL_					0	0	0			REV__ENST00000243347.4_1_2:152236083-152236167:+|nuORF	REV__ENST00000243347.4_1_2:152236083-152236167:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3035278320312	2	523.302062	1044.58957	-0.79828	-0.00041774	3.7287	0.0019512	2.9304	0.0015335	523.3039175741588	88.739	4.0351	88.739	87.555	91.59	0					439	94	6	0	0	0	0.86791	2	8610	8610;8622		37.028	0.37203	1	9288900	+		67248	24236	44700	44719	76567;76568	76567					0.06905887256561982
YYIFTLLL	8	Unmodified	_YYIFTLLL_					0	0	0			REV__ENST00000243347.4_1_2:152236083-152236167:+|nuORF	REV__ENST00000243347.4_1_2:152236083-152236167:+|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	523.3038940429688	2	523.302062	1044.58957	-0.75421	-0.00039468	3.8832	0.0020321	3.129	0.0016374	523.3039964981095	91.826	2.332	91.826	91.507	93.839	0					135	53	3	0	0	0	0.86791	1	9044	9044		28.254	0.37203	1	769560	+		67249	24236	44700	44719	76569	76569					0.06905887256561982
YYIFTLLL	8	Unmodified	_YYIFTLLL_					0	0	0			REV__ENST00000243347.4_1_2:152236083-152236167:+|nuORF	REV__ENST00000243347.4_1_2:152236083-152236167:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	523.303466796875	2	523.302062	1044.58957	-0.041207	-2.1563E-05	2.9083	0.0015219	2.8671	0.0015004	523.3034896140772	88.665	5.5663	88.733	87.445	93.011	0.068161					468	131	6	0	0	0	0.86791	1	8901	8901		28.254	0.17279	1	12431000	+		67250	24236	44700	44719	76570	76570					0.06905887256561982
YYIFTLLL	8	Unmodified	_YYIFTLLL_					0	0	0			REV__ENST00000243347.4_1_2:152236083-152236167:+|nuORF	REV__ENST00000243347.4_1_2:152236083-152236167:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	523.3034057617188	2	523.302062	1044.58957	1.699	0.00088911	1.1403	0.00059675	2.8394	0.0014859	523.3025712105348	88.666	6.4502	88.593	87.38	93.83	-0.073174					500	153	6	0	0	0	0.86791	1	9316	9316		28.254	0	1	13080000	+		67251	24236	44700	44719	76571	76571					0.06905887256561982
YYIFTLLL	8	Unmodified	_YYIFTLLL_					0	0	0			REV__ENST00000243347.4_1_2:152236083-152236167:+|nuORF	REV__ENST00000243347.4_1_2:152236083-152236167:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	523.3036499023438	2	523.302062	1044.58957	1.1688	0.00061163	1.6837	0.00088109	2.8525	0.0014927	523.3028536656657	88.46	5.8104	88.51	86.906	92.716	0.050415					499	137	6	0	0	0	0.88915	1	9434	9434		35.201	0	1	12580000	+		67252	24236	44700	44719	76572	76572					0.06905887256561982
YYIMGFLKNT	10	Unmodified	_YYIMGFLKNT_					0	0	0		ENST00000216416.8_1_14:54893495-54893558:-|nuORF	ENST00000216416.8_1_14:54893495-54893558:-|nuORF	ENST00000216416.8_1_14:54893495-54893558:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	625.3214111328125	2	625.317917	1248.62128	-0.24573	-0.00015366	3.4666	0.0021677	3.2208	0.002014	625.3199751264785	64.714	1.3394	64.719	64.245	65.584	0.0046997					92	46	4	0	0	0	0.44803	1	6042	6042		60.118	3.3972	1	486230			67253	9138	44701	44720	76573	76573					0.006915119482073351
YYIQEKASHRM	11	Unmodified	_YYIQEKASHRM_					0	0	0		nc|ENSG00000136813|Q5VYK3|ECPAS;ENSG00000136813|ENST00000684092|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	nc|ENSG00000136813|Q5VYK3|ECPAS	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	476.3076171875	3	475.902966	1424.68707	-0.98929	-0.00047081	4.1181	0.0019598	3.1288	0.001489	475.90466471253467	27.645	0.33282	27.714	27.52	27.853	0.06868					26	16	2	0	0	0	0.181	1	1120	1120		20.315	0.68808	1	46082			67254	4137	44702	44721	76574	76574					-0.008286988769214076
YYISNEYKG	9	Unmodified	_YYISNEYKG_					0	0	0		ENSG00000197635|ENST00000360534|DPP4;ENST00000434918.6_1_2:162849795-162888681:-|nuORF	ENSG00000197635|ENST00000360534|DPP4	ENSG00000197635|ENST00000360534|DPP4	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	568.7649536132812	2	568.766571	1135.51859	0.77917	0.00044317	-2.9826	-0.0016964	-2.2034	-0.0012532	568.7647838120163	83.726	1.9818	83.657	83.085	85.067	-0.069313					114	45	4	0	0	0	0.51592	1	8575	8575		51.193	6.8155	1	1633100			67255	8186	44703	44722	76575	76575					-0.043748575189283656
YYKQQLKKAL	10	Unmodified	_YYKQQLKKAL_					0	0	0			REV__ENST00000555843.5_1_14:31581697-31582359:-|nuORF	REV__ENST00000555843.5_1_14:31581697-31582359:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	641.882568359375	2	641.87953	1281.74451	2.2004	0.0014124	2.3254	0.0014926	4.5258	0.002905	641.8808599123347	97.684	4.2	97.629	96.672	100.87	-0.055542					325	97	5	0	0	0	0.74274	1	10631	10631		42.396	10.866	1	3624200	+		67256	28688	44704	44723	76576	76576					0.11490511391002656
YYKQQLKKAL	10	Unmodified	_YYKQQLKKAL_					0	0	0			REV__ENST00000555843.5_1_14:31581697-31582359:-|nuORF	REV__ENST00000555843.5_1_14:31581697-31582359:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	641.8822631835938	2	641.87953	1281.74451	1.6823	0.0010798	2.8836	0.0018509	4.5658	0.0029307	641.8812488016101	97.581	4.2452	97.629	96.613	100.86	0.048157					336	98	5	0	0	0	0.85934	2	10470	10470;10482		35.618	2.8678	1	3772700	+		67257	28688	44704	44723	76577;76578	76577					0.11490511391002656
YYKQQLKKAL	10	Unmodified	_YYKQQLKKAL_					0	0	0			REV__ENST00000555843.5_1_14:31581697-31582359:-|nuORF	REV__ENST00000555843.5_1_14:31581697-31582359:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	641.881591796875	2	641.87953	1281.74451	1.5937	0.0010229	2.8364	0.0018207	4.4301	0.0028436	641.8811997248309	95.576	2.5829	95.807	94.242	96.825	0.23103					208	61	4	0	0	0	0.85934	1	9871	9871		35.618	0.46626	1	2238900	+		67258	28688	44704	44723	76579	76579					0.11490511391002656
YYKYKAKR	8	Unmodified	_YYKYKAKR_					0	0	0			REV__ENST00000249837.7_1_15:62217673-62219407:-|nuORF	REV__ENST00000249837.7_1_15:62217673-62219407:-|nuORF	MULTI-SECPEP	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	560.34033203125	2	560.319109	1118.62366	0.39573	0.00022174	3.7332	0.0020918	4.1289	0.0023135	560.8203061708408	103.9	0.2946	104.08	103.93	104.22	0.17096					10	6	2	0	0	0	0.4196	1	10994	10994		24.203	0	1	37518	+		67259	24278	44705	44724	76580	76580					0.06909728468190224
YYLHQERLQ	9	Unmodified	_YYLHQERLQ_					0	0	0			REV__nc|ENSG00000095917|Q9BZJ3-2|TPSD1	REV__nc|ENSG00000095917|Q9BZJ3-2|TPSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	625.3196411132812	2	625.319837	1248.62512	-0.24573	-0.00015366	0.39627	0.00024779	0.15054	9.4135E-05	625.3199751264785	64.714	1.3394	64.719	64.245	65.584	0.0046997					92	46	4	0	0	0	0.18601	1	6060	6060		76.774	11.617	1	486230	+		67260	17070	44706	44725	76581	76581					0.01075317766299122
YYLHQERLQ	9	Unmodified	_YYLHQERLQ_					0	0	0			REV__nc|ENSG00000095917|Q9BZJ3-2|TPSD1	REV__nc|ENSG00000095917|Q9BZJ3-2|TPSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	625.3204345703125	2	625.319837	1248.62512	-0.11128	-6.9589E-05	0.26203	0.00016385	0.15075	9.4266E-05	625.3198556455025	64.556	1.0904	64.521	64.106	65.197	-0.034256					72	32	3	0	0	0	0.28163	1	6158	6158		66.429	2.222	1	434670	+		67261	17070	44706	44725	76582	76582					0.01075317766299122
YYLHQERLQ	9	Unmodified	_YYLHQERLQ_					0	0	0			REV__nc|ENSG00000095917|Q9BZJ3-2|TPSD1	REV__nc|ENSG00000095917|Q9BZJ3-2|TPSD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	625.3201904296875	2	625.319837	1248.62512	-0.68478	-0.00042821	0.7891	0.00049344	0.10432	6.5236E-05	625.3201576946594	64.459	1.2974	64.486	64.064	65.361	0.027138					89	41	4	0	0	0	0.22631	2	6078	6078;6090		71.296	11.365	1	457250	+		67262	17070	44706	44725	76583;76584	76583					0.01075317766299122
YYLILILT	8	Unmodified	_YYLILILT_					0	0	0			REV__ENSG00000168830|ENST00000305344|HTR1E	REV__ENSG00000168830|ENST00000305344|HTR1E	MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	506.3030090332031	2	506.309887	1010.60522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.48	1	43.48	42.98	43.98	0								0	0	0	0.29631	1	3087	3087		25.45	0	1		+		67263	21528	44707	44726	76585	76585					0.1003417377361302
YYLMANLAAAD	11	Unmodified	_YYLMANLAAAD_					0	0	0		ENSG00000198121|ENST00000683809|LPAR1;nc|ENSG00000198121|Q92633-2|LPAR1	ENSG00000198121|ENST00000683809|LPAR1	ENSG00000198121|ENST00000683809|LPAR1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	608.2813110351562	2	608.289356	1214.56416	-1.1122	-0.00067655	-1.4304	-0.0008701	-2.5426	-0.0015466	608.2883606901746	70.838	0.67776	70.876	70.635	71.313	0.038055					94	36	4	0	0	0	0.25092	1	6792	6792		76.774	7.1465	1	732520			67264	8240	44708	44727	76586	76586					-0.034539553281774715
YYLNYRDVLHK	11	Unmodified	_YYLNYRDVLHK_					0	0	0			REV__nc|ENSG00000137216|Q5T3F8-3|TMEM63B	REV__nc|ENSG00000137216|Q5T3F8-3|TMEM63B	MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	495.25982666015625	3	495.261259	1482.76195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.413	1	35.661	35.161	36.161	0.24769								0	0	0	0.56276	1	2702	2702		27.644	9.8108	1		+		67265	19368	44709	44728	76587	76587					0.039878069259884796
YYLRRRIRAS	10	Unmodified	_YYLRRRIRAS_					0	0	0			REV__ENSG00000115649|ENST00000360507|CNPPD1	REV__ENSG00000115649|ENST00000360507|CNPPD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	451.9327087402344	3	451.933588	1352.77894	-0.13819	-6.2454E-05	-1.9412	-0.00087729	-2.0794	-0.00093975	451.932724968845	100.8	2.5405	100.83	99.913	102.45	0.031036					181	59	5	0	0	0	0.86621	1	10769	10769		26.063	11.977	1	924270	+		67266	18137	44710	44729	76588	76588					0.11665772322453449
YYLRRRIRAS	10	Unmodified	_YYLRRRIRAS_					0	0	0			REV__ENSG00000115649|ENST00000360507|CNPPD1	REV__ENSG00000115649|ENST00000360507|CNPPD1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	451.9326171875	3	451.933588	1352.77894	1.2229	0.00055267	-3.0967	-0.0013995	-1.8738	-0.00084684	451.93203668437076	98.85	2.391	98.898	97.373	99.764	0.048164					142	55	4	0	0	0	0.85259	1	10538	10538		20.03	0.7678	1	439970	+		67267	18137	44710	44729	76589	76589					0.11665772322453449
YYLRRRIRAS	10	Unmodified	_YYLRRRIRAS_					0	0	0			REV__ENSG00000115649|ENST00000360507|CNPPD1	REV__ENSG00000115649|ENST00000360507|CNPPD1	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	451.93267822265625	3	451.933588	1352.77894	-1.7713	-0.0008005	-0.19718	-8.9114E-05	-1.9685	-0.00088961	451.93340802352935	100.57	2.3737	100.74	99.884	102.26	0.17199					164	56	4	0	0	0	0.85633	2	10448	10448;10472		31.634	7.4025	1	618930	+		67268	18137	44710	44729	76590;76591	76590					0.11665772322453449
YYLTFVQEL	9	Unmodified	_YYLTFVQEL_					0	0	0		ENSG00000147130|ENST00000314425|ZMYM3;nc|ENSG00000147130|Q14202-2|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	ENSG00000147130|ENST00000314425|ZMYM3	MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	588.3050537109375	2	588.30279	1174.59103	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.733	1	54.684	54.184	55.184	-0.049271								0	0	0	0.34972	1	4547	4547		47.657	12.505	1				67269	4884	44711	44730	76592	76592					0.010714765546708804
YYLVLQRRK	9	Unmodified	_YYLVLQRRK_					0	0	0			REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	619.869384765625	2	619.87204	1237.72953	-0.2143	-0.00013284	-4.1033	-0.0025435	-4.3176	-0.0026764	619.8693629473679	94.449	2.6788	94.449	92.765	95.443	0					183	62	4	0	0	0	0.77546	1	9354	9354		31.955	1.6371	1	1169100	+		67270	26290	44712	44731	76593	76593					0.1201706431365892
YYLVLQRRK	9	Unmodified	_YYLVLQRRK_					0	0	0			REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep3_25cm90min3s_msms11	7	619.8687133789062	2	619.87204	1237.72953	-1.2246	-0.00075908	-3.2008	-0.0019841	-4.4254	-0.0027432	619.8699343359237	93.986	2.8301	94.185	92.357	95.187	0.19827					209	67	4	0	0	0	0.76996	1	9534	9534		33.516	8.0654	1	3118800	+		67271	26290	44712	44731	76594	76594					0.1201706431365892
YYNLGRLVSA	10	Unmodified	_YYNLGRLVSA_					0	0	0		ENST00000489713.5_1_13:101277731-101290025:-|nuORF;ENST00000462211.5_1_13:101277731-101294530:-|nuORF;nc|ENSG00000125247|Q5T4D3-2|TMTC4	ENST00000489713.5_1_13:101277731-101290025:-|nuORF	ENST00000489713.5_1_13:101277731-101290025:-|nuORF	MULTI-MSMS	170121_AM_ATRT20_W632_20__Rep3_25cm90min3s_msms3	1	578.3103637695312	2	578.31148	1154.60841	-0.30541	-0.00017662	-1.2607	-0.00072908	-1.5661	-0.0009057	578.3105993918314	110.37	1.6265	110.37	110.02	111.65	0					155	51	5	0	0	0	0.86348	1	11510	11510		31.53	6.0796	1	2787700			67272	12038	44713	44732	76595	76595					0.03728816880334307
YYNLGRLVSA	10	Unmodified	_YYNLGRLVSA_					0	0	0		ENST00000489713.5_1_13:101277731-101290025:-|nuORF;ENST00000462211.5_1_13:101277731-101294530:-|nuORF;nc|ENSG00000125247|Q5T4D3-2|TMTC4	ENST00000489713.5_1_13:101277731-101290025:-|nuORF	ENST00000489713.5_1_13:101277731-101290025:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	578.3099975585938	2	578.31148	1154.60841	0.63739	0.00036861	-2.4387	-0.0014103	-1.8013	-0.0010417	578.3098719113019	110.31	1.8374	110.34	110.1	111.94	0.031738					174	64	3	0	0	0	0.80179	1	12096	12096		39.253	6.4404	1	3242500			67273	12038	44713	44732	76596	76596					0.03728816880334307
YYPGEVPQPS	10	Unmodified	_YYPGEVPQPS_					0	0	0		L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|107|3|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|107|3|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.8022982352542656|0.2795461482764699|2.69|63.0|107|3|sense	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.7650756835938	2	568.766571	1135.51859	-1.1682	-0.00066444	-0.9878	-0.00056183	-2.156	-0.0012263	568.7659289361396	83.716	2.0783	83.783	83.125	85.204	0.066727					124	47	4	0	0	0	0.70553	1	8369	8369		44.377	1.5129	1	1738400			67274	14669	44714	44733	76597	76597					-0.04374857518882891
YYQIQKIILK	10	Unmodified	_YYQIQKIILK_					0	0	0		ENST00000371361.3_1_10:96112804-96114802:-|nuORF	ENST00000371361.3_1_10:96112804-96114802:-|nuORF	ENST00000371361.3_1_10:96112804-96114802:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	437.267822265625	3	437.267463	1308.78056	-0.040503	-1.7711E-05	0.93992	0.000411	0.89941	0.00039328	437.2677977458944	50.43	1.6394	50.428	49.536	51.176	-0.0020447					184	45	5	0	0	0	0.86151	1	4275	4275		15.333	0.63944	1	2735300			67275	10663	44715	44734	76598	76598					0.1385196856786024
YYQIQKIILK	10	Unmodified	_YYQIQKIILK_					0	0	0		ENST00000371361.3_1_10:96112804-96114802:-|nuORF	ENST00000371361.3_1_10:96112804-96114802:-|nuORF	ENST00000371361.3_1_10:96112804-96114802:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	437.2679138183594	3	437.267463	1308.78056	1.2133	0.00053055	-0.31759	-0.00013887	0.89574	0.00039168	437.2672396896614	50.554	1.7579	50.562	49.504	51.262	0.0077477					187	47	5	0	0	0	0.85259	1	4362	4362		20.03	0	1	3327600			67276	10663	44715	44734	76599	76599					0.1385196856786024
YYQRQDVE	8	Unmodified	_YYQRQDVE_					0	0	0		ENSG00000132763|ENST00000401061|MMACHC	ENSG00000132763|ENST00000401061|MMACHC	ENSG00000132763|ENST00000401061|MMACHC	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	550.7539672851562	2	550.753995	1099.49344	0.60783	0.00033477	-0.65046	-0.00035824	-0.042628	-2.3477E-05	550.7534082919669	32.397	0.51375	32.504	32.274	32.788	0.10707					30	11	4	0	0	0	0.60357	1	2282	2282		71.296	2.5089	1	433110			67277	3825	44716	44735	76600	76600					-0.05232912321457661
YYRELFFI	8	Unmodified	_YYRELFFI_					0	0	0			REV__nc|ENSG00000204961|Q9Y5H5-2|PCDHA9	REV__nc|ENSG00000204961|Q9Y5H5-2|PCDHA9	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	576.3687744140625	2	575.800217	1149.58588	-0.35723	-0.00020569	-3.9318	-0.0022639	-4.289	-0.0024696	575.797855751028	44.756	0.55715	44.752	44.411	44.968	-0.0041618					20	12	2	0	0	0	0.4196	1	3515	3515		30.504	3.7075	1	69391	+		67278	30165	44717	44736	76601	76601					0.017072174827262643
YYRGSPSKHA	10	Unmodified	_YYRGSPSKHA_					0	0	0		chr12:19261021-19269770|19|11.32|0.18|5.97|+|2|PLEKHA5,PLEKHA5|1	chr12:19261021-19269770|19|11.32|0.18|5.97|+|2|PLEKHA5,PLEKHA5|1	chr12:19261021-19269770|19|11.32|0.18|5.97|+|2|PLEKHA5,PLEKHA5|1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	583.2911376953125	2	583.291079	1164.56761	-0.4375	-0.00025519	-1.6956	-0.00098902	-2.1331	-0.0012442	583.2914546218474	75.818	1.4306	76.386	75.46	76.89	0.56836					72	33	4	0	0	0	0.67571	1	8626	8626		45.972	1.8554	1	1497300			67279	126	44718	44737	76602	76602					-0.008095244392507084
YYRKLETRRI	10	Unmodified	_YYRKLETRRI_					0	0	0			REV__nc|ENSG00000111912|Q8NI08-2|NCOA7	REV__nc|ENSG00000111912|Q8NI08-2|NCOA7	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	466.6085510253906	3	466.605249	1396.79392	1.7469	0.00081509	4.1725	0.0019469	5.9194	0.002762	466.60708058634947	100.05	2.1066	100.4	99.392	101.5	0.34591					133	52	4	0	0	0	0.85086	1	12172	12172		19.263	0.73163	1	526140	+		67280	17906	44719	44738	76603	76603					0.11139219399797184
YYSWLVVLVIV	11	Unmodified	_YYSWLVVLVIV_					0	0	0			REV__ENST00000482827.1_1_X:74722059-74742841:-|nuORF	REV__ENST00000482827.1_1_X:74722059-74742841:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	451.93304443359375	3	451.93208	1352.77441	2.1819	0.00098608	-0.82037	-0.00037075	1.3615	0.00061532	451.9316131706083	100.36	1.9025	100.71	99.62	101.52	0.3459					138	47	4	0	0	0	0.75906	1	12225	12225		20.03	2.1973	1	885260	+		67281	17338	44720	44739	76604	76604					0.1121345033632224
YYTERKLS	8	Unmodified	_YYTERKLS_					0	0	0			REV__ENSG00000075218|ENST00000454366|GTSE1	REV__ENSG00000075218|ENST00000454366|GTSE1	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	530.2803955078125	2	530.277106	1058.53966	-0.036045	-1.9114E-05	4.145	0.002198	4.1089	0.0021789	530.2801983138189	59.193	1.3973	59.179	58.111	59.508	-0.013729					80	45	3	0	0	0	0.9283	1	5398	5398		49.442	8.6634	1	262600	+		67282	16704	44721	44740	76605	76605					0.01273152580643
YYTITVLLLL	10	Unmodified	_YYTITVLLLL_					0	0	0			REV__ENST00000430246.6_1_14:21731323-21731509:-|nuORF	REV__ENST00000430246.6_1_14:21731323-21731509:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep1_25cm90min3s_msms9	5	606.3697509765625	2	606.367933	1210.72131	1.0648	0.00064567	1.4946	0.00090627	2.5594	0.0015519	606.3686977940384	94.008	3.2437	94.236	93.32	96.564	0.22863					196	77	3	0	0	0	0.85939	1	9554	9554		23.042	2.2053	1	863300	+		67283	26598	44722	44741	76606	76606					0.12438072553663915
YYTNPTIKIL	10	Unmodified	_YYTNPTIKIL_					0	0	0			REV__ENST00000367568.4_1_6:144509016-144509238:+|nuORF	REV__ENST00000367568.4_1_6:144509016-144509238:+|nuORF	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	612.87939453125	2	613.344989	1224.67542	0.30024	0.00018415	1.6418	0.001007	1.942	0.0011911	613.3459511230526	104.61	0.24042	104.65	104.43	104.67	0.039856					7	5	2	0	0	0	0.37624	1	11375	11375		35.618	0	1	213130	+		67284	25571	44723	44742	76607	76607					0.07207427371417907
YYTVGGYVQS	10	Unmodified	_YYTVGGYVQS_					0	0	0			REV__ENSG00000108349|ENST00000264645|CASC3	REV__ENSG00000108349|ENST00000264645|CASC3	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep1_25cm90min3s_msms17	2	568.7651977539062	2	568.766571	1135.51859	-1.1682	-0.00066444	-0.9878	-0.00056183	-2.156	-0.0012263	568.7659289361396	83.716	2.0783	83.783	83.125	85.204	0.066727					124	47	4	0	0	0	0.57924	1	8356	8356		51.193	3.2332	1	1738400	+		67285	17703	44724	44743	76608	76608					-0.04374857518905628
YYVLLETT	8	Unmodified	_YYVLLETT_					0	0	0			REV__nc|ENSG00000176834|Q8N0Z9-2|VSIG10	REV__nc|ENSG00000176834|Q8N0Z9-2|VSIG10	MULTI-SECPEP	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	501.29046630859375	2	501.263133	1000.51171	1.0619	0.00053227	-2.8639	-0.0014356	-1.802	-0.00090328	501.2635343597149	86.492	0.25081	86.419	86.27	86.521	-0.073761					7	5	2	0	0	0	0.4196	1	8920	8920		40.573	16.053	1	48341	+		67286	22146	44725	44744	76609	76609					0.011478296005293487
YYVRAVLHL	9	Unmodified	_YYVRAVLHL_					0	0	0		ENST00000566534.5_1_16:88713161-88717421:-|nuORF;ENSG00000051523|ENST00000261623|CYBA	ENST00000566534.5_1_16:88713161-88717421:-|nuORF	ENST00000566534.5_1_16:88713161-88717421:-|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep2_25cm90min3s_msms18	3	567.3298950195312	2	567.326934	1132.63931	1.5887	0.00090129	3.6924	0.0020948	5.2811	0.0029961	567.3289162071854	90.63	2.9174	90.56	88.556	91.474	-0.069977					268	69	6	0	0	0	0.7932	1	9365	9365		26.796	1.3459	1	5459400			67287	1001	44726	44745	76610	76610					0.07830014985233902
YYVRAVLHL	9	Unmodified	_YYVRAVLHL_					0	0	0		ENST00000566534.5_1_16:88713161-88717421:-|nuORF;ENSG00000051523|ENST00000261623|CYBA	ENST00000566534.5_1_16:88713161-88717421:-|nuORF	ENST00000566534.5_1_16:88713161-88717421:-|nuORF	MULTI-MSMS	170121_AM_ATRT22_W632_20__Rep2_25cm90min3s_msms10	6	567.3297729492188	2	567.326934	1132.63931	0.79571	0.00045143	4.1414	0.0023495	4.9371	0.0028009	567.3291847725083	92.342	5.9021	92.501	91.231	97.133	0.15875					481	140	6	0	0	0	0.7932	2	9487	9355;9487		26.796	1.2474	1	18145000			67288	1001	44726	44745	76611;76612	76612					0.07830014985233902
YYVRAVLHL	9	Unmodified	_YYVRAVLHL_					0	0	0		ENST00000566534.5_1_16:88713161-88717421:-|nuORF;ENSG00000051523|ENST00000261623|CYBA	ENST00000566534.5_1_16:88713161-88717421:-|nuORF	ENST00000566534.5_1_16:88713161-88717421:-|nuORF	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8	567.3289184570312	2	567.326934	1132.63931	1.3743	0.0007797	3.9991	0.0022688	5.3735	0.0030485	567.3290881593534	92.099	5.4251	92.546	91.544	96.969	0.44661					346	133	5	0	0	0	0.76996	1	11227	11227		33.516	3.1979	1	6182600			67289	1001	44726	44745	76613	76613					0.07830014985233902
YYVYNSVSY	9	Unmodified	_YYVYNSVSY_					0	0	0		ENST00000548116.5_1_1:28271947-28285346:+|nuORF;ENSG00000130768|ENST00000373894|SMPDL3B	ENST00000548116.5_1_1:28271947-28285346:+|nuORF	ENST00000548116.5_1_1:28271947-28285346:+|nuORF	MULTI-MSMS	170121_AM_ATRT21_W632_20__Rep3_25cm90min3s_msms19	4	579.7593383789062	2	579.261122	1156.50769	-0.19739	-0.00011434	0.024256	1.405E-05	-0.17313	-0.00010029	579.7622527200799	78.514	0.88966	78.566	78.108	78.998	0.051682					39	24	3	0	0	0	0.30689	1	7724	7724		64.207	16.292	1	141030			67290	3682	44727	44746	76614	76614					-0.06430259893181756
YYYIVVLL	8	Unmodified	_YYYIVVLL_					0	0	0		ENSG00000169359|ENST00000643144|SLC33A1	ENSG00000169359|ENST00000643144|SLC33A1	ENSG00000169359|ENST00000643144|SLC33A1	MULTI-MSMS	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.30322265625	2	523.302062	1044.58957	-1.0824	-0.0005664	4.0253	0.0021064	2.9429	0.00154	523.3040633143451	88.411	4.977	88.881	87.819	92.796	0.47069					421	122	5	0	0	0	0.88393	1	10295	10295		33.493	5.6107	1	13160000			67291	6489	44728	44747	76615	76615					0.06905887256561982
YYYWHLRKQVL	11	Unmodified	_YYYWHLRKQVL_					0	0	0		ENSG00000139926|ENST00000344768|FRMD6;nc|ENSG00000139926|Q96NE9-2|FRMD6	ENSG00000139926|ENST00000344768|FRMD6	ENSG00000139926|ENST00000344768|FRMD6	MULTI-SECPEP	170121_AM_ATRT7_Aszites_W632_20__Rep5_25cm90min3s_msms26	9	523.2940673828125	3	523.617266	1567.82997	0.39063	0.00020454	3.4843	0.0018244	3.8749	0.002029	523.6189353081559	17.386	0.31635	16.775	16.613	16.929	-0.6107					9	6	2	0	0	0	0.18191	1	248	248		14.694	6.2864	1	53897			67292	4402	44729	44748	76616	76616					0.06876676576621321
YYYWHLRKQVL	11	Unmodified	_YYYWHLRKQVL_					0	0	0		ENSG00000139926|ENST00000344768|FRMD6;nc|ENSG00000139926|Q96NE9-2|FRMD6	ENSG00000139926|ENST00000344768|FRMD6	ENSG00000139926|ENST00000344768|FRMD6	MULTI-MATCH	170121_AM_ATRT7_Aszites_W632_20__Rep4_25cm90min3s_msms25	8		3	523.617266	1567.82997	1.0487	0.00054913	2.7428	0.0014362	3.7915	0.0019853	523.9530378796558	17.264	0.31963	16.781	16.672	16.991	-0.48256	0.0030765	-0.00069086	NaN	14.694	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	58260			67293	4402	44729	44748							0.06876676576621321